ChrX	gffcl	locus	46110	47369	.	+	.	ID=RLOC_00000001;geneIDs=FBgn0039711.2.path2;transcripts=FBgn0039711.2.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	46110	47369	.	+	.	ID=FBgn0039711.2.mrna2;geneID=FBgn0039711.2.path2;Name=FBgn0039711.2;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1258;mismatches=2;indels=0;unknowns=0;Target=FBgn0039711.2 1260 1 .;locus=RLOC_00000001
ChrX	stalkie_big_nohaplotig	exon	46110	47369	99	+	.	Parent=FBgn0039711.2.mrna2
ChrX	stalkie_big_nohaplotig	CDS	46110	47369	.	+	0	Parent=FBgn0039711.2.mrna2
ChrX	gffcl	locus	107996	274371	.	+	.	ID=RLOC_00000002;geneIDs=comp145318_c0_seq1.path1;transcripts=comp145318_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	107996	274371	.	+	.	ID=comp145318_c0_seq1.mrna1;geneID=comp145318_c0_seq1.path1;Name=comp145318_c0_seq1;Dir=indeterminatecoverage=71.1;identity=99.5;matches=598;mismatches=3;indels=0;unknowns=0;Target=comp145318_c0_seq1 462 340 .;locus=RLOC_00000002
ChrX	stalkie_big_nohaplotig	exon	107996	108563	99	+	.	Parent=comp145318_c0_seq1.mrna1;Target=comp145318_c0_seq1 569 2 .
ChrX	stalkie_big_nohaplotig	exon	236864	236865	100	+	.	Parent=comp145318_c0_seq1.mrna1;Target=comp145318_c0_seq1 571 570 .
ChrX	stalkie_big_nohaplotig	exon	244255	244262	100	+	.	Parent=comp145318_c0_seq1.mrna1;Target=comp145318_c0_seq1 579 572 .
ChrX	stalkie_big_nohaplotig	exon	257894	257896	100	+	.	Parent=comp145318_c0_seq1.mrna1;Target=comp145318_c0_seq1 582 580 .
ChrX	stalkie_big_nohaplotig	exon	261749	261755	100	+	.	Parent=comp145318_c0_seq1.mrna1;Target=comp145318_c0_seq1 589 583 .
ChrX	stalkie_big_nohaplotig	exon	267405	267411	85	+	.	Parent=comp145318_c0_seq1.mrna1;Target=comp145318_c0_seq1 596 590 .
ChrX	stalkie_big_nohaplotig	exon	274366	274371	83	+	.	Parent=comp145318_c0_seq1.mrna1;Target=comp145318_c0_seq1 602 597 .
ChrX	stalkie_big_nohaplotig	CDS	108334	108456	.	+	0	Parent=comp145318_c0_seq1.mrna1
ChrX	gffcl	locus	109408	131459	.	-	.	ID=RLOC_00000003;geneIDs=FBgn0000490.1.path1,comp161680_c1_seq1.path1;transcripts=FBgn0000490.1.mrna1,comp161680_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	109408	113070	.	-	.	ID=FBgn0000490.1.mrna1;geneID=FBgn0000490.1.path1;Name=FBgn0000490.1;Dir=sensecoverage=100.0;identity=100.0;matches=1290;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000003
ChrX	stalkie_big_nohaplotig	exon	109408	110282	100	-	.	Parent=FBgn0000490.1.mrna1;Target=FBgn0000490.1 416 1290 +
ChrX	stalkie_big_nohaplotig	exon	112656	113070	100	-	.	Parent=FBgn0000490.1.mrna1;Target=FBgn0000490.1 1 415 +
ChrX	stalkie_big_nohaplotig	CDS	109408	110282	.	-	2	Parent=FBgn0000490.1.mrna1;Target=FBgn0000490.1 416 1290 +
ChrX	stalkie_big_nohaplotig	CDS	112656	113070	.	-	0	Parent=FBgn0000490.1.mrna1;Target=FBgn0000490.1 1 415 +
ChrX	stalkie_big_nohaplotig	mRNA	113049	131459	.	-	.	ID=comp161680_c1_seq1.mrna1;geneID=comp161680_c1_seq1.path1;Name=comp161680_c1_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=2444;mismatches=0;indels=2;unknowns=0;Target=comp161680_c1_seq1 156 608 .;locus=RLOC_00000003
ChrX	stalkie_big_nohaplotig	exon	113049	113669	99	-	.	Parent=comp161680_c1_seq1.mrna1;Target=comp161680_c1_seq1 1 622 -
ChrX	stalkie_big_nohaplotig	exon	129637	131459	99	-	.	Parent=comp161680_c1_seq1.mrna1;Target=comp161680_c1_seq1 623 2446 -
ChrX	stalkie_big_nohaplotig	CDS	113204	113655	.	-	0	Parent=comp161680_c1_seq1.mrna1
ChrX	gffcl	locus	127476	170006	.	-	.	ID=RLOC_00000004;geneIDs=comp88927_c0_seq1.path1;transcripts=comp88927_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	127476	170006	.	-	.	ID=comp88927_c0_seq1.mrna1;geneID=comp88927_c0_seq1.path1;Name=comp88927_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.5;matches=904;mismatches=53;indels=42;unknowns=0;Target=comp88927_c0_seq1 847 716 .;locus=RLOC_00000004
ChrX	stalkie_big_nohaplotig	exon	127476	128140	100	-	.	Parent=comp88927_c0_seq1.mrna1;Target=comp88927_c0_seq1 1302 638 .
ChrX	stalkie_big_nohaplotig	exon	133181	133185	100	-	.	Parent=comp88927_c0_seq1.mrna1;Target=comp88927_c0_seq1 637 633 .
ChrX	stalkie_big_nohaplotig	exon	133577	133588	100	-	.	Parent=comp88927_c0_seq1.mrna1;Target=comp88927_c0_seq1 632 621 .
ChrX	stalkie_big_nohaplotig	exon	136170	136235	46	-	.	Parent=comp88927_c0_seq1.mrna1;Target=comp88927_c0_seq1 620 557 .
ChrX	stalkie_big_nohaplotig	exon	139297	139305	100	-	.	Parent=comp88927_c0_seq1.mrna1;Target=comp88927_c0_seq1 529 521 .
ChrX	stalkie_big_nohaplotig	exon	143971	143975	100	-	.	Parent=comp88927_c0_seq1.mrna1;Target=comp88927_c0_seq1 520 516 .
ChrX	stalkie_big_nohaplotig	exon	144006	144011	100	-	.	Parent=comp88927_c0_seq1.mrna1;Target=comp88927_c0_seq1 455 450 .
ChrX	stalkie_big_nohaplotig	exon	145626	145640	93	-	.	Parent=comp88927_c0_seq1.mrna1;Target=comp88927_c0_seq1 402 388 .
ChrX	stalkie_big_nohaplotig	exon	146618	146625	50	-	.	Parent=comp88927_c0_seq1.mrna1;Target=comp88927_c0_seq1 387 383 .
ChrX	stalkie_big_nohaplotig	exon	149174	149183	100	-	.	Parent=comp88927_c0_seq1.mrna1;Target=comp88927_c0_seq1 356 347 .
ChrX	stalkie_big_nohaplotig	exon	149187	149226	48	-	.	Parent=comp88927_c0_seq1.mrna1;Target=comp88927_c0_seq1 299 263 .
ChrX	stalkie_big_nohaplotig	exon	149338	149346	100	-	.	Parent=comp88927_c0_seq1.mrna1;Target=comp88927_c0_seq1 255 247 .
ChrX	stalkie_big_nohaplotig	exon	149348	149356	100	-	.	Parent=comp88927_c0_seq1.mrna1;Target=comp88927_c0_seq1 219 211 .
ChrX	stalkie_big_nohaplotig	exon	151493	151494	100	-	.	Parent=comp88927_c0_seq1.mrna1;Target=comp88927_c0_seq1 210 209 .
ChrX	stalkie_big_nohaplotig	exon	152306	152316	78	-	.	Parent=comp88927_c0_seq1.mrna1;Target=comp88927_c0_seq1 208 195 .
ChrX	stalkie_big_nohaplotig	exon	152437	152444	100	-	.	Parent=comp88927_c0_seq1.mrna1;Target=comp88927_c0_seq1 156 149 .
ChrX	stalkie_big_nohaplotig	exon	155287	155329	53	-	.	Parent=comp88927_c0_seq1.mrna1;Target=comp88927_c0_seq1 147 90 .
ChrX	stalkie_big_nohaplotig	exon	159719	159723	100	-	.	Parent=comp88927_c0_seq1.mrna1;Target=comp88927_c0_seq1 89 85 .
ChrX	stalkie_big_nohaplotig	exon	159742	159748	100	-	.	Parent=comp88927_c0_seq1.mrna1;Target=comp88927_c0_seq1 43 37 .
ChrX	stalkie_big_nohaplotig	exon	164941	164948	100	-	.	Parent=comp88927_c0_seq1.mrna1;Target=comp88927_c0_seq1 36 29 .
ChrX	stalkie_big_nohaplotig	exon	169290	169294	100	-	.	Parent=comp88927_c0_seq1.mrna1;Target=comp88927_c0_seq1 28 24 .
ChrX	stalkie_big_nohaplotig	exon	169984	170006	100	-	.	Parent=comp88927_c0_seq1.mrna1;Target=comp88927_c0_seq1 23 1 .
ChrX	stalkie_big_nohaplotig	CDS	127931	128062	.	-	0	Parent=comp88927_c0_seq1.mrna1
ChrX	gffcl	locus	131483	133159	.	+	.	ID=RLOC_00000005;geneIDs=comp91884_c0_seq1.path1;transcripts=comp91884_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	131483	133159	.	+	.	ID=comp91884_c0_seq1.mrna1;geneID=comp91884_c0_seq1.path1;Name=comp91884_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1675;mismatches=2;indels=1;unknowns=0;Target=comp91884_c0_seq1 1678 1 .;CDS_Target=comp91884_c0_seq1 723 580 .;locus=RLOC_00000005
ChrX	stalkie_big_nohaplotig	exon	131483	133159	99	+	.	Parent=comp91884_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	132061	132204	.	+	0	Parent=comp91884_c0_seq1.mrna1
ChrX	gffcl	locus	143968	144703	.	+	.	ID=RLOC_00000006;geneIDs=comp167120_c0_seq1.path1;transcripts=comp167120_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	143968	144703	.	+	.	ID=comp167120_c0_seq1.mrna1;geneID=comp167120_c0_seq1.path1;Name=comp167120_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=655;mismatches=0;indels=0;unknowns=0;Target=comp167120_c0_seq1 154 531 +;locus=RLOC_00000006
ChrX	stalkie_big_nohaplotig	exon	143968	144074	100	+	.	Parent=comp167120_c0_seq1.mrna1;Target=comp167120_c0_seq1 1 107 +
ChrX	stalkie_big_nohaplotig	exon	144156	144703	100	+	.	Parent=comp167120_c0_seq1.mrna1;Target=comp167120_c0_seq1 108 655 +
ChrX	stalkie_big_nohaplotig	CDS	144202	144579	.	+	0	Parent=comp167120_c0_seq1.mrna1
ChrX	gffcl	locus	161936	163880	.	-	.	ID=RLOC_00000007;geneIDs=comp150459_c2_seq1.path1;transcripts=comp150459_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	161936	163880	.	-	.	ID=comp150459_c2_seq1.mrna1;geneID=comp150459_c2_seq1.path1;Name=comp150459_c2_seq1;Dir=sensecoverage=99.8;identity=99.9;matches=1377;mismatches=1;indels=0;unknowns=0;Target=comp150459_c2_seq1 124 303 +;locus=RLOC_00000007
ChrX	stalkie_big_nohaplotig	exon	161936	162557	100	-	.	Parent=comp150459_c2_seq1.mrna1;Target=comp150459_c2_seq1 757 1378 +
ChrX	stalkie_big_nohaplotig	exon	162683	162760	100	-	.	Parent=comp150459_c2_seq1.mrna1;Target=comp150459_c2_seq1 679 756 +
ChrX	stalkie_big_nohaplotig	exon	162824	162893	100	-	.	Parent=comp150459_c2_seq1.mrna1;Target=comp150459_c2_seq1 609 678 +
ChrX	stalkie_big_nohaplotig	exon	163273	163880	99	-	.	Parent=comp150459_c2_seq1.mrna1;Target=comp150459_c2_seq1 1 608 +
ChrX	stalkie_big_nohaplotig	CDS	163578	163757	.	-	0	Parent=comp150459_c2_seq1.mrna1
ChrX	gffcl	locus	239369	239817	.	-	.	ID=RLOC_00000010;geneIDs=comp144073_c0_seq1.path2;transcripts=comp144073_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	239369	239817	.	-	.	ID=comp144073_c0_seq1.mrna2;geneID=comp144073_c0_seq1.path2;Name=comp144073_c0_seq1;Dir=sensecoverage=84.9;identity=98.8;matches=316;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000010
ChrX	stalkie_big_nohaplotig	exon	239369	239552	100	-	.	Parent=comp144073_c0_seq1.mrna2;Target=comp144073_c0_seq1 137 320 +
ChrX	stalkie_big_nohaplotig	exon	239613	239685	100	-	.	Parent=comp144073_c0_seq1.mrna2;Target=comp144073_c0_seq1 64 136 +
ChrX	stalkie_big_nohaplotig	exon	239755	239817	93	-	.	Parent=comp144073_c0_seq1.mrna2;Target=comp144073_c0_seq1 1 63 +
ChrX	stalkie_big_nohaplotig	CDS	239458	239552	.	-	2	Parent=comp144073_c0_seq1.mrna2;Target=comp144073_c0_seq1 137 231 +
ChrX	stalkie_big_nohaplotig	CDS	239613	239685	.	-	0	Parent=comp144073_c0_seq1.mrna2;Target=comp144073_c0_seq1 64 136 +
ChrX	gffcl	locus	358208	359728	.	+	.	ID=RLOC_00000011;geneIDs=comp162269_c9_seq1.path2;transcripts=comp162269_c9_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	358208	359728	.	+	.	ID=comp162269_c9_seq1.mrna2;geneID=comp162269_c9_seq1.path2;Name=comp162269_c9_seq1;Dir=indeterminatecoverage=99.9;identity=99.5;matches=1514;mismatches=7;indels=0;unknowns=0;Target=comp162269_c9_seq1 1522 2 .;CDS_Target=comp162269_c9_seq1 1156 2 .;locus=RLOC_00000011
ChrX	stalkie_big_nohaplotig	exon	358208	359728	99	+	.	Parent=comp162269_c9_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	358208	359362	.	+	0	Parent=comp162269_c9_seq1.mrna2
ChrX	gffcl	locus	498502	499533	.	-	.	ID=RLOC_00000013;geneIDs=Dp_FBgn0244711.1.path2;transcripts=Dp_FBgn0244711.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	498502	499533	.	-	.	ID=Dp_FBgn0244711.1.mrna2;geneID=Dp_FBgn0244711.1.path2;Name=Dp_FBgn0244711.1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1022;mismatches=10;indels=0;unknowns=0;Target=Dp_FBgn0244711.1 1032 1 .;locus=RLOC_00000013
ChrX	stalkie_big_nohaplotig	exon	498502	499533	99	-	.	Parent=Dp_FBgn0244711.1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	498502	499533	.	-	0	Parent=Dp_FBgn0244711.1.mrna2
ChrX	gffcl	locus	536990	537574	.	-	.	ID=RLOC_00000014;geneIDs=comp159305_c1_seq1.path1;transcripts=comp159305_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	536990	537574	.	-	.	ID=comp159305_c1_seq1.mrna1;geneID=comp159305_c1_seq1.path1;Name=comp159305_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=574;mismatches=11;indels=0;unknowns=0;Target=comp159305_c1_seq1 585 1 .;CDS_Target=comp159305_c1_seq1 561 439 .;locus=RLOC_00000014
ChrX	stalkie_big_nohaplotig	exon	536990	537574	98	-	.	Parent=comp159305_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	537014	537136	.	-	0	Parent=comp159305_c1_seq1.mrna1
ChrX	gffcl	locus	628230	629801	.	-	.	ID=RLOC_00000016;geneIDs=ORF645.path1;transcripts=ORF645.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	628230	629801	.	-	.	ID=ORF645.mrna1;geneID=ORF645.path1;Name=ORF645;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1572;mismatches=0;indels=0;unknowns=0;Target=ORF645 1572 1 .;locus=RLOC_00000016
ChrX	stalkie_big_nohaplotig	exon	628230	629801	100	-	.	Parent=ORF645.mrna1
ChrX	stalkie_big_nohaplotig	CDS	628230	629801	.	-	0	Parent=ORF645.mrna1
ChrX	gffcl	locus	671365	672764	.	-	.	ID=RLOC_00000017;geneIDs=comp117280_c0_seq1.path1,comp291175_c0_seq1.path1;transcripts=comp117280_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	671934	672764	.	-	.	ID=comp117280_c0_seq1.mrna1;geneID=comp117280_c0_seq1.path1;Name=comp117280_c0_seq1;Dir=indeterminatecoverage=99.4;identity=100.0;matches=831;mismatches=0;indels=0;unknowns=0;Target=comp117280_c0_seq1 836 6 .;CDS_Target=comp117280_c0_seq1 208 8 .;locus=RLOC_00000017
ChrX	stalkie_big_nohaplotig	exon	671934	672764	100	-	.	Parent=comp117280_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	672562	672762	.	-	0	Parent=comp117280_c0_seq1.mrna1
ChrX	gffcl	locus	672826	673455	.	+	.	ID=RLOC_00000018;geneIDs=comp546484_c0_seq1.path1;transcripts=comp546484_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	672826	673455	.	+	.	ID=comp546484_c0_seq1.mrna1;geneID=comp546484_c0_seq1.path1;Name=comp546484_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=630;mismatches=0;indels=0;unknowns=0;Target=comp546484_c0_seq1 630 1 .;CDS_Target=comp546484_c0_seq1 312 163 .;locus=RLOC_00000018
ChrX	stalkie_big_nohaplotig	exon	672826	673455	100	+	.	Parent=comp546484_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	672988	673137	.	+	0	Parent=comp546484_c0_seq1.mrna1
ChrX	gffcl	locus	676772	679442	.	-	.	ID=RLOC_00000019;geneIDs=FBgn0015816.1.path1;transcripts=FBgn0015816.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	676772	679442	.	-	.	ID=FBgn0015816.1.mrna1;geneID=FBgn0015816.1.path1;Name=FBgn0015816.1;Dir=sensecoverage=100.0;identity=99.9;matches=1937;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000019
ChrX	stalkie_big_nohaplotig	exon	676772	677098	100	-	.	Parent=FBgn0015816.1.mrna1;Target=FBgn0015816.1 1612 1938 +
ChrX	stalkie_big_nohaplotig	exon	677555	678255	99	-	.	Parent=FBgn0015816.1.mrna1;Target=FBgn0015816.1 911 1611 +
ChrX	stalkie_big_nohaplotig	exon	678322	679013	100	-	.	Parent=FBgn0015816.1.mrna1;Target=FBgn0015816.1 219 910 +
ChrX	stalkie_big_nohaplotig	exon	679079	679238	100	-	.	Parent=FBgn0015816.1.mrna1;Target=FBgn0015816.1 59 218 +
ChrX	stalkie_big_nohaplotig	exon	679385	679442	100	-	.	Parent=FBgn0015816.1.mrna1;Target=FBgn0015816.1 1 58 +
ChrX	stalkie_big_nohaplotig	CDS	676772	677098	.	-	0	Parent=FBgn0015816.1.mrna1;Target=FBgn0015816.1 1612 1938 +
ChrX	stalkie_big_nohaplotig	CDS	677555	678255	.	-	2	Parent=FBgn0015816.1.mrna1;Target=FBgn0015816.1 911 1611 +
ChrX	stalkie_big_nohaplotig	CDS	678322	679013	.	-	1	Parent=FBgn0015816.1.mrna1;Target=FBgn0015816.1 219 910 +
ChrX	stalkie_big_nohaplotig	CDS	679079	679238	.	-	2	Parent=FBgn0015816.1.mrna1;Target=FBgn0015816.1 59 218 +
ChrX	stalkie_big_nohaplotig	CDS	679385	679442	.	-	0	Parent=FBgn0015816.1.mrna1;Target=FBgn0015816.1 1 58 +
ChrX	gffcl	locus	730215	734654	.	-	.	ID=RLOC_00000022;geneIDs=comp161662_c2_seq1.path1;transcripts=comp161662_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	730215	734654	.	-	.	ID=comp161662_c2_seq1.mrna1;geneID=comp161662_c2_seq1.path1;Name=comp161662_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=4427;mismatches=13;indels=4;unknowns=0;Target=comp161662_c2_seq1 4444 1 .;CDS_Target=comp161662_c2_seq1 1800 1213 .;locus=RLOC_00000022
ChrX	stalkie_big_nohaplotig	exon	730215	734654	99	-	.	Parent=comp161662_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	732858	733445	.	-	0	Parent=comp161662_c2_seq1.mrna1
ChrX	gffcl	locus	741412	742340	.	.	.	ID=RLOC_00000023;geneIDs=comp72103_c0_seq1.path1,comp432834_c0_seq1.path1;transcripts=comp72103_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	741412	741997	.	-	.	ID=comp72103_c0_seq1.mrna1;geneID=comp72103_c0_seq1.path1;Name=comp72103_c0_seq1;Dir=indeterminatecoverage=97.7;identity=100.0;matches=586;mismatches=0;indels=0;unknowns=0;Target=comp72103_c0_seq1 586 1 .;CDS_Target=comp72103_c0_seq1 478 413 .;locus=RLOC_00000023
ChrX	stalkie_big_nohaplotig	exon	741412	741997	100	-	.	Parent=comp72103_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	741520	741585	.	-	0	Parent=comp72103_c0_seq1.mrna1
ChrX	gffcl	locus	742495	742847	.	-	.	ID=RLOC_00000024;geneIDs=comp146385_c0_seq1.path1;transcripts=comp146385_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	742495	742847	.	-	.	ID=comp146385_c0_seq1.mrna1;geneID=comp146385_c0_seq1.path1;Name=comp146385_c0_seq1;Dir=indeterminatecoverage=97.8;identity=100.0;matches=353;mismatches=0;indels=0;unknowns=0;Target=comp146385_c0_seq1 361 9 .;CDS_Target=comp146385_c0_seq1 167 9 .;locus=RLOC_00000024
ChrX	stalkie_big_nohaplotig	exon	742495	742847	100	-	.	Parent=comp146385_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	742689	742847	.	-	0	Parent=comp146385_c0_seq1.mrna1
ChrX	gffcl	locus	797195	798163	.	+	.	ID=RLOC_00000025;geneIDs=ORF2151.path1;transcripts=ORF2151.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	797195	798163	.	+	.	ID=ORF2151.mrna1;geneID=ORF2151.path1;Name=ORF2151;Dir=sensecoverage=100.0;identity=100.0;matches=909;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000025
ChrX	stalkie_big_nohaplotig	exon	797195	797274	100	+	.	Parent=ORF2151.mrna1;Target=ORF2151 1 80 +
ChrX	stalkie_big_nohaplotig	exon	797335	798163	100	+	.	Parent=ORF2151.mrna1;Target=ORF2151 81 909 +
ChrX	stalkie_big_nohaplotig	CDS	797195	797274	.	+	0	Parent=ORF2151.mrna1;Target=ORF2151 1 80 +
ChrX	stalkie_big_nohaplotig	CDS	797335	798163	.	+	1	Parent=ORF2151.mrna1;Target=ORF2151 81 909 +
ChrX	gffcl	locus	841638	844169	.	+	.	ID=RLOC_00000026;geneIDs=ORF248.path1;transcripts=ORF248.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	841638	844169	.	+	.	ID=ORF248.mrna1;geneID=ORF248.path1;Name=ORF248;Dir=sensecoverage=100.0;identity=100.0;matches=2270;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000026
ChrX	stalkie_big_nohaplotig	exon	841638	841687	100	+	.	Parent=ORF248.mrna1;Target=ORF248 1 50 +
ChrX	stalkie_big_nohaplotig	exon	841828	842293	100	+	.	Parent=ORF248.mrna1;Target=ORF248 51 516 +
ChrX	stalkie_big_nohaplotig	exon	842354	843086	100	+	.	Parent=ORF248.mrna1;Target=ORF248 517 1249 +
ChrX	stalkie_big_nohaplotig	exon	843148	844169	99	+	.	Parent=ORF248.mrna1;Target=ORF248 1250 2271 +
ChrX	stalkie_big_nohaplotig	CDS	841638	841687	.	+	0	Parent=ORF248.mrna1;Target=ORF248 1 50 +
ChrX	stalkie_big_nohaplotig	CDS	841828	842293	.	+	1	Parent=ORF248.mrna1;Target=ORF248 51 516 +
ChrX	stalkie_big_nohaplotig	CDS	842354	843086	.	+	0	Parent=ORF248.mrna1;Target=ORF248 517 1249 +
ChrX	stalkie_big_nohaplotig	CDS	843148	844169	.	+	2	Parent=ORF248.mrna1;Target=ORF248 1250 2271 +
ChrX	gffcl	locus	848028	848570	.	-	.	ID=RLOC_00000027;geneIDs=comp96543_c0_seq1.path1;transcripts=comp96543_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	848028	848570	.	-	.	ID=comp96543_c0_seq1.mrna1;geneID=comp96543_c0_seq1.path1;Name=comp96543_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=543;mismatches=0;indels=0;unknowns=0;Target=comp96543_c0_seq1 543 1 .;CDS_Target=comp96543_c0_seq1 332 216 .;locus=RLOC_00000027
ChrX	stalkie_big_nohaplotig	exon	848028	848570	100	-	.	Parent=comp96543_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	848239	848355	.	-	0	Parent=comp96543_c0_seq1.mrna1
ChrX	gffcl	locus	865316	865353	.	-	.	ID=RLOC_00000028;geneIDs=comp116845_c0_seq1.path2;transcripts=comp116845_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	865316	865353	.	-	.	ID=comp116845_c0_seq1.mrna2;geneID=comp116845_c0_seq1.path2;Name=comp116845_c0_seq1;Dir=indeterminatecoverage=14.8;identity=100.0;matches=38;mismatches=0;indels=0;unknowns=0;Target=comp116845_c0_seq1 256 219 .;locus=RLOC_00000028
ChrX	stalkie_big_nohaplotig	exon	865316	865353	100	-	.	Parent=comp116845_c0_seq1.mrna2
ChrX	gffcl	locus	908562	908870	.	-	.	ID=RLOC_00000029;geneIDs=comp148444_c0_seq1.path1;transcripts=comp148444_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	908562	908870	.	-	.	ID=comp148444_c0_seq1.mrna1;geneID=comp148444_c0_seq1.path1;Name=comp148444_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=304;mismatches=5;indels=0;unknowns=0;Target=comp148444_c0_seq1 309 1 .;CDS_Target=comp148444_c0_seq1 105 1 .;locus=RLOC_00000029
ChrX	stalkie_big_nohaplotig	exon	908562	908870	98	-	.	Parent=comp148444_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	908766	908870	.	-	0	Parent=comp148444_c0_seq1.mrna1
ChrX	gffcl	locus	944741	945701	.	+	.	ID=RLOC_00000030;geneIDs=ORF2177.path1;transcripts=ORF2177.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	944741	945701	.	+	.	ID=ORF2177.mrna1;geneID=ORF2177.path1;Name=ORF2177;Dir=sensecoverage=100.0;identity=100.0;matches=903;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000030
ChrX	stalkie_big_nohaplotig	exon	944741	944820	100	+	.	Parent=ORF2177.mrna1;Target=ORF2177 1 80 +
ChrX	stalkie_big_nohaplotig	exon	944879	945701	100	+	.	Parent=ORF2177.mrna1;Target=ORF2177 81 903 +
ChrX	stalkie_big_nohaplotig	CDS	944741	944820	.	+	0	Parent=ORF2177.mrna1;Target=ORF2177 1 80 +
ChrX	stalkie_big_nohaplotig	CDS	944879	945701	.	+	1	Parent=ORF2177.mrna1;Target=ORF2177 81 903 +
ChrX	gffcl	locus	967793	967965	.	+	.	ID=RLOC_00000031;geneIDs=comp144990_c1_seq1.path1;transcripts=comp144990_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	967793	967965	.	+	.	ID=comp144990_c1_seq1.mrna1;geneID=comp144990_c1_seq1.path1;Name=comp144990_c1_seq1;Dir=indeterminatecoverage=36.0;identity=99.4;matches=172;mismatches=1;indels=0;unknowns=0;Target=comp144990_c1_seq1 173 1 .;CDS_Target=comp144990_c1_seq1 173 91 .;locus=RLOC_00000031
ChrX	stalkie_big_nohaplotig	exon	967793	967965	99	+	.	Parent=comp144990_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	967883	967965	.	+	0	Parent=comp144990_c1_seq1.mrna1
ChrX	gffcl	locus	1042148	1044312	.	+	.	ID=RLOC_00000033;geneIDs=FBgn0031990.path1;transcripts=FBgn0031990.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1042148	1044312	.	+	.	ID=FBgn0031990.mrna1;geneID=FBgn0031990.path1;Name=FBgn0031990;Dir=indeterminatecoverage=99.3;identity=100.0;matches=2165;mismatches=0;indels=0;unknowns=0;Target=FBgn0031990 2170 6 .;CDS_Target=FBgn0031990 2169 7 .;locus=RLOC_00000033
ChrX	stalkie_big_nohaplotig	exon	1042148	1044312	100	+	.	Parent=FBgn0031990.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1042149	1044311	.	+	0	Parent=FBgn0031990.mrna1
ChrX	gffcl	locus	1058055	1058709	.	-	.	ID=RLOC_00000034;geneIDs=comp148211_c1_seq1.path1;transcripts=comp148211_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1058055	1058709	.	-	.	ID=comp148211_c1_seq1.mrna1;geneID=comp148211_c1_seq1.path1;Name=comp148211_c1_seq1;Dir=indeterminatecoverage=82.4;identity=100.0;matches=655;mismatches=0;indels=0;unknowns=0;Target=comp148211_c1_seq1 655 1 .;CDS_Target=comp148211_c1_seq1 513 253 .;locus=RLOC_00000034
ChrX	stalkie_big_nohaplotig	exon	1058055	1058709	100	-	.	Parent=comp148211_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1058197	1058457	.	-	0	Parent=comp148211_c1_seq1.mrna1
ChrX	gffcl	locus	1059293	1059432	.	-	.	ID=RLOC_00000035;geneIDs=comp148211_c1_seq1.path2;transcripts=comp148211_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	1059293	1059432	.	-	.	ID=comp148211_c1_seq1.mrna2;geneID=comp148211_c1_seq1.path2;Name=comp148211_c1_seq1;Dir=indeterminatecoverage=17.6;identity=100.0;matches=140;mismatches=0;indels=0;unknowns=0;Target=comp148211_c1_seq1 795 656 .;locus=RLOC_00000035
ChrX	stalkie_big_nohaplotig	exon	1059293	1059432	100	-	.	Parent=comp148211_c1_seq1.mrna2
ChrX	gffcl	locus	1130733	1134039	.	+	.	ID=RLOC_00000036;geneIDs=comp179191_c0_seq1.path1;transcripts=comp179191_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1130733	1134039	.	+	.	ID=comp179191_c0_seq1.mrna1;geneID=comp179191_c0_seq1.path1;Name=comp179191_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=789;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000036
ChrX	stalkie_big_nohaplotig	exon	1130733	1130911	100	+	.	Parent=comp179191_c0_seq1.mrna1;Target=comp179191_c0_seq1 1 179 +
ChrX	stalkie_big_nohaplotig	exon	1133112	1133228	100	+	.	Parent=comp179191_c0_seq1.mrna1;Target=comp179191_c0_seq1 180 296 +
ChrX	stalkie_big_nohaplotig	exon	1133297	1133426	100	+	.	Parent=comp179191_c0_seq1.mrna1;Target=comp179191_c0_seq1 297 426 +
ChrX	stalkie_big_nohaplotig	exon	1133676	1134039	99	+	.	Parent=comp179191_c0_seq1.mrna1;Target=comp179191_c0_seq1 427 790 +
ChrX	stalkie_big_nohaplotig	CDS	1130812	1130911	.	+	0	Parent=comp179191_c0_seq1.mrna1;Target=comp179191_c0_seq1 80 179 +
ChrX	stalkie_big_nohaplotig	CDS	1133112	1133228	.	+	2	Parent=comp179191_c0_seq1.mrna1;Target=comp179191_c0_seq1 180 296 +
ChrX	stalkie_big_nohaplotig	CDS	1133297	1133426	.	+	2	Parent=comp179191_c0_seq1.mrna1;Target=comp179191_c0_seq1 297 426 +
ChrX	stalkie_big_nohaplotig	CDS	1133676	1133688	.	+	1	Parent=comp179191_c0_seq1.mrna1;Target=comp179191_c0_seq1 427 439 +
ChrX	gffcl	locus	1141264	1143995	.	+	.	ID=RLOC_00000037;geneIDs=comp167977_c0_seq1.path1;transcripts=comp167977_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1141264	1143995	.	+	.	ID=comp167977_c0_seq1.mrna1;geneID=comp167977_c0_seq1.path1;Name=comp167977_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=938;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000037
ChrX	stalkie_big_nohaplotig	exon	1141264	1141503	100	+	.	Parent=comp167977_c0_seq1.mrna1;Target=comp167977_c0_seq1 1 240 +
ChrX	stalkie_big_nohaplotig	exon	1143003	1143252	100	+	.	Parent=comp167977_c0_seq1.mrna1;Target=comp167977_c0_seq1 241 490 +
ChrX	stalkie_big_nohaplotig	exon	1143314	1143370	100	+	.	Parent=comp167977_c0_seq1.mrna1;Target=comp167977_c0_seq1 491 547 +
ChrX	stalkie_big_nohaplotig	exon	1143605	1143995	100	+	.	Parent=comp167977_c0_seq1.mrna1;Target=comp167977_c0_seq1 548 938 +
ChrX	stalkie_big_nohaplotig	CDS	1141404	1141503	.	+	0	Parent=comp167977_c0_seq1.mrna1;Target=comp167977_c0_seq1 141 240 +
ChrX	stalkie_big_nohaplotig	CDS	1143003	1143142	.	+	2	Parent=comp167977_c0_seq1.mrna1;Target=comp167977_c0_seq1 241 380 +
ChrX	gffcl	locus	1162860	1168257	.	-	.	ID=RLOC_00000038;geneIDs=comp163703_c0_seq1.path1;transcripts=comp163703_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1162860	1168257	.	-	.	ID=comp163703_c0_seq1.mrna1;geneID=comp163703_c0_seq1.path1;Name=comp163703_c0_seq1;Dir=indeterminatecoverage=92.4;identity=98.1;matches=5301;mismatches=30;indels=74;unknowns=0;Target=comp163703_c0_seq1 5765 428 .;CDS_Target=comp163703_c0_seq1 549 430 .;locus=RLOC_00000038
ChrX	stalkie_big_nohaplotig	exon	1162860	1168257	98	-	.	Parent=comp163703_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1168093	1168255	.	-	0	Parent=comp163703_c0_seq1.mrna1
ChrX	gffcl	locus	1198145	1198558	.	+	.	ID=RLOC_00000039;geneIDs=comp163949_c0_seq1.path1;transcripts=comp163949_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1198145	1198558	.	+	.	ID=comp163949_c0_seq1.mrna1;geneID=comp163949_c0_seq1.path1;Name=comp163949_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=414;mismatches=0;indels=0;unknowns=0;Target=comp163949_c0_seq1 414 1 .;CDS_Target=comp163949_c0_seq1 317 153 .;locus=RLOC_00000039
ChrX	stalkie_big_nohaplotig	exon	1198145	1198558	100	+	.	Parent=comp163949_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1198297	1198461	.	+	0	Parent=comp163949_c0_seq1.mrna1
ChrX	gffcl	locus	1198616	1199292	.	-	.	ID=RLOC_00000040;geneIDs=comp151958_c1_seq1.path1;transcripts=comp151958_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1198616	1199292	.	-	.	ID=comp151958_c1_seq1.mrna1;geneID=comp151958_c1_seq1.path1;Name=comp151958_c1_seq1;Dir=indeterminatecoverage=99.9;identity=98.5;matches=667;mismatches=10;indels=0;unknowns=0;Target=comp151958_c1_seq1 677 1 .;CDS_Target=comp151958_c1_seq1 101 3 .;locus=RLOC_00000040
ChrX	stalkie_big_nohaplotig	exon	1198616	1199292	98	-	.	Parent=comp151958_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1199192	1199290	.	-	0	Parent=comp151958_c1_seq1.mrna1
ChrX	gffcl	locus	1278187	1279239	.	-	.	ID=RLOC_00000041;geneIDs=ORF1794.path1;transcripts=ORF1794.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1278187	1279239	.	-	.	ID=ORF1794.mrna1;geneID=ORF1794.path1;Name=ORF1794;Dir=sensecoverage=100.0;identity=99.9;matches=995;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000041
ChrX	stalkie_big_nohaplotig	exon	1278187	1279126	99	-	.	Parent=ORF1794.mrna1;Target=ORF1794 57 996 +
ChrX	stalkie_big_nohaplotig	exon	1279184	1279239	100	-	.	Parent=ORF1794.mrna1;Target=ORF1794 1 56 +
ChrX	stalkie_big_nohaplotig	CDS	1278187	1279126	.	-	1	Parent=ORF1794.mrna1;Target=ORF1794 57 996 +
ChrX	stalkie_big_nohaplotig	CDS	1279184	1279239	.	-	0	Parent=ORF1794.mrna1;Target=ORF1794 1 56 +
ChrX	gffcl	locus	1312182	1314396	.	+	.	ID=RLOC_00000042;geneIDs=comp58113_c0_seq1.path1,comp94709_c0_seq1.path1;transcripts=comp58113_c0_seq1.mrna1,comp94709_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1312182	1314396	.	+	.	ID=comp58113_c0_seq1.mrna1;geneID=comp58113_c0_seq1.path1;Name=comp58113_c0_seq1;Dir=sensecoverage=97.0;identity=100.0;matches=383;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000042
ChrX	stalkie_big_nohaplotig	exon	1312182	1312220	100	+	.	Parent=comp58113_c0_seq1.mrna1;Target=comp58113_c0_seq1 13 51 +
ChrX	stalkie_big_nohaplotig	exon	1312282	1312349	100	+	.	Parent=comp58113_c0_seq1.mrna1;Target=comp58113_c0_seq1 52 119 +
ChrX	stalkie_big_nohaplotig	exon	1312428	1312526	100	+	.	Parent=comp58113_c0_seq1.mrna1;Target=comp58113_c0_seq1 120 218 +
ChrX	stalkie_big_nohaplotig	exon	1314220	1314396	100	+	.	Parent=comp58113_c0_seq1.mrna1;Target=comp58113_c0_seq1 219 395 +
ChrX	stalkie_big_nohaplotig	CDS	1312293	1312349	.	+	0	Parent=comp58113_c0_seq1.mrna1;Target=comp58113_c0_seq1 63 119 +
ChrX	stalkie_big_nohaplotig	CDS	1312428	1312526	.	+	0	Parent=comp58113_c0_seq1.mrna1;Target=comp58113_c0_seq1 120 218 +
ChrX	stalkie_big_nohaplotig	CDS	1314220	1314327	.	+	0	Parent=comp58113_c0_seq1.mrna1;Target=comp58113_c0_seq1 219 326 +
ChrX	stalkie_big_nohaplotig	mRNA	1312503	1314241	.	+	.	ID=comp94709_c0_seq1.mrna1;geneID=comp94709_c0_seq1.path1;Name=comp94709_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1737;mismatches=2;indels=0;unknowns=0;Target=comp94709_c0_seq1 1739 1 .;CDS_Target=comp94709_c0_seq1 1552 1418 .;locus=RLOC_00000042
ChrX	stalkie_big_nohaplotig	exon	1312503	1314241	99	+	.	Parent=comp94709_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1313920	1314054	.	+	0	Parent=comp94709_c0_seq1.mrna1
ChrX	gffcl	locus	1318490	1330063	.	-	.	ID=RLOC_00000043;geneIDs=FBgn0041337.1.path1,comp151898_c0_seq1.path1;transcripts=comp151898_c0_seq1.mrna1,FBgn0041337.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1318490	1330063	.	-	.	ID=comp151898_c0_seq1.mrna1;geneID=comp151898_c0_seq1.path1;Name=comp151898_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=2556;mismatches=1;indels=6;unknowns=0;Target=comp151898_c0_seq1 2295 2399 .;locus=RLOC_00000043
ChrX	stalkie_big_nohaplotig	exon	1318490	1319785	99	-	.	Parent=comp151898_c0_seq1.mrna1;Target=comp151898_c0_seq1 1 1292 -
ChrX	stalkie_big_nohaplotig	exon	1319889	1320015	100	-	.	Parent=comp151898_c0_seq1.mrna1;Target=comp151898_c0_seq1 1293 1419 -
ChrX	stalkie_big_nohaplotig	exon	1320107	1320529	99	-	.	Parent=comp151898_c0_seq1.mrna1;Target=comp151898_c0_seq1 1420 1842 -
ChrX	stalkie_big_nohaplotig	exon	1320975	1321079	99	-	.	Parent=comp151898_c0_seq1.mrna1;Target=comp151898_c0_seq1 1843 1948 -
ChrX	stalkie_big_nohaplotig	exon	1321489	1321599	100	-	.	Parent=comp151898_c0_seq1.mrna1;Target=comp151898_c0_seq1 1949 2059 -
ChrX	stalkie_big_nohaplotig	exon	1329424	1329562	100	-	.	Parent=comp151898_c0_seq1.mrna1;Target=comp151898_c0_seq1 2060 2198 -
ChrX	stalkie_big_nohaplotig	exon	1329704	1330063	99	-	.	Parent=comp151898_c0_seq1.mrna1;Target=comp151898_c0_seq1 2199 2559 -
ChrX	stalkie_big_nohaplotig	CDS	1329800	1329903	.	-	0	Parent=comp151898_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1319261	1321075	.	-	.	ID=FBgn0041337.1.mrna1;geneID=FBgn0041337.1.path1;Name=FBgn0041337.1;Dir=sensecoverage=100.0;identity=99.8;matches=1099;mismatches=1;indels=1;unknowns=0;Target=FBgn0041337.1 3 62 +;locus=RLOC_00000043
ChrX	stalkie_big_nohaplotig	exon	1319261	1319445	100	-	.	Parent=FBgn0041337.1.mrna1;Target=FBgn0041337.1 917 1101 +
ChrX	stalkie_big_nohaplotig	exon	1319522	1319785	100	-	.	Parent=FBgn0041337.1.mrna1;Target=FBgn0041337.1 653 916 +
ChrX	stalkie_big_nohaplotig	exon	1319889	1320015	100	-	.	Parent=FBgn0041337.1.mrna1;Target=FBgn0041337.1 526 652 +
ChrX	stalkie_big_nohaplotig	exon	1320107	1320529	99	-	.	Parent=FBgn0041337.1.mrna1;Target=FBgn0041337.1 103 525 +
ChrX	stalkie_big_nohaplotig	exon	1320975	1321075	99	-	.	Parent=FBgn0041337.1.mrna1;Target=FBgn0041337.1 1 102 +
ChrX	stalkie_big_nohaplotig	CDS	1321015	1321073	.	-	0	Parent=FBgn0041337.1.mrna1
ChrX	gffcl	locus	1344974	1355006	.	+	.	ID=RLOC_00000044;geneIDs=comp146310_c0_seq1.path1;transcripts=comp146310_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1344974	1355006	.	+	.	ID=comp146310_c0_seq1.mrna1;geneID=comp146310_c0_seq1.path1;Name=comp146310_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=1108;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000044
ChrX	stalkie_big_nohaplotig	exon	1344974	1345175	99	+	.	Parent=comp146310_c0_seq1.mrna1;Target=comp146310_c0_seq1 1 202 +
ChrX	stalkie_big_nohaplotig	exon	1345245	1345328	98	+	.	Parent=comp146310_c0_seq1.mrna1;Target=comp146310_c0_seq1 203 286 +
ChrX	stalkie_big_nohaplotig	exon	1346232	1346454	100	+	.	Parent=comp146310_c0_seq1.mrna1;Target=comp146310_c0_seq1 287 509 +
ChrX	stalkie_big_nohaplotig	exon	1354341	1354577	100	+	.	Parent=comp146310_c0_seq1.mrna1;Target=comp146310_c0_seq1 510 746 +
ChrX	stalkie_big_nohaplotig	exon	1354643	1355006	100	+	.	Parent=comp146310_c0_seq1.mrna1;Target=comp146310_c0_seq1 747 1110 +
ChrX	stalkie_big_nohaplotig	CDS	1346314	1346454	.	+	0	Parent=comp146310_c0_seq1.mrna1;Target=comp146310_c0_seq1 369 509 +
ChrX	stalkie_big_nohaplotig	CDS	1354341	1354577	.	+	0	Parent=comp146310_c0_seq1.mrna1;Target=comp146310_c0_seq1 510 746 +
ChrX	stalkie_big_nohaplotig	CDS	1354643	1354783	.	+	0	Parent=comp146310_c0_seq1.mrna1;Target=comp146310_c0_seq1 747 887 +
ChrX	gffcl	locus	1368876	1369934	.	-	.	ID=RLOC_00000045;geneIDs=comp61373_c0_seq1.path1;transcripts=comp61373_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1368876	1369934	.	-	.	ID=comp61373_c0_seq1.mrna1;geneID=comp61373_c0_seq1.path1;Name=comp61373_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.8;matches=1057;mismatches=2;indels=0;unknowns=0;Target=comp61373_c0_seq1 1060 2 .;CDS_Target=comp61373_c0_seq1 342 145 .;locus=RLOC_00000045
ChrX	stalkie_big_nohaplotig	exon	1368876	1369934	99	-	.	Parent=comp61373_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1369594	1369791	.	-	0	Parent=comp61373_c0_seq1.mrna1
ChrX	gffcl	locus	1398690	1400058	.	+	.	ID=RLOC_00000046;geneIDs=ORF877.path3;transcripts=ORF877.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	1398690	1400058	.	+	.	ID=ORF877.mrna3;geneID=ORF877.path3;Name=ORF877;Dir=indeterminatecoverage=99.9;identity=98.5;matches=1349;mismatches=20;indels=0;unknowns=0;Target=ORF877 1371 3 .;CDS_Target=ORF877 1371 4 .;locus=RLOC_00000046
ChrX	stalkie_big_nohaplotig	exon	1398690	1400058	98	+	.	Parent=ORF877.mrna3
ChrX	stalkie_big_nohaplotig	CDS	1398691	1400058	.	+	0	Parent=ORF877.mrna3
ChrX	gffcl	locus	1431849	1433408	.	-	.	ID=RLOC_00000047;geneIDs=FBgn0030576.1.path1;transcripts=FBgn0030576.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1431849	1433408	.	-	.	ID=FBgn0030576.1.mrna1;geneID=FBgn0030576.1.path1;Name=FBgn0030576.1;Dir=sensecoverage=100.0;identity=100.0;matches=1308;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000047
ChrX	stalkie_big_nohaplotig	exon	1431849	1432125	100	-	.	Parent=FBgn0030576.1.mrna1;Target=FBgn0030576.1 1032 1308 +
ChrX	stalkie_big_nohaplotig	exon	1432187	1432565	100	-	.	Parent=FBgn0030576.1.mrna1;Target=FBgn0030576.1 653 1031 +
ChrX	stalkie_big_nohaplotig	exon	1432645	1432746	100	-	.	Parent=FBgn0030576.1.mrna1;Target=FBgn0030576.1 551 652 +
ChrX	stalkie_big_nohaplotig	exon	1432805	1433067	100	-	.	Parent=FBgn0030576.1.mrna1;Target=FBgn0030576.1 288 550 +
ChrX	stalkie_big_nohaplotig	exon	1433122	1433408	100	-	.	Parent=FBgn0030576.1.mrna1;Target=FBgn0030576.1 1 287 +
ChrX	stalkie_big_nohaplotig	CDS	1431849	1432125	.	-	1	Parent=FBgn0030576.1.mrna1;Target=FBgn0030576.1 1032 1308 +
ChrX	stalkie_big_nohaplotig	CDS	1432187	1432565	.	-	2	Parent=FBgn0030576.1.mrna1;Target=FBgn0030576.1 653 1031 +
ChrX	stalkie_big_nohaplotig	CDS	1432645	1432746	.	-	2	Parent=FBgn0030576.1.mrna1;Target=FBgn0030576.1 551 652 +
ChrX	stalkie_big_nohaplotig	CDS	1432805	1433067	.	-	1	Parent=FBgn0030576.1.mrna1;Target=FBgn0030576.1 288 550 +
ChrX	stalkie_big_nohaplotig	CDS	1433122	1433408	.	-	0	Parent=FBgn0030576.1.mrna1;Target=FBgn0030576.1 1 287 +
ChrX	gffcl	locus	1449935	1810271	.	+	.	ID=RLOC_00000049;geneIDs=comp139838_c0_seq1.path1;transcripts=comp139838_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1449935	1810271	.	+	.	ID=comp139838_c0_seq1.mrna1;geneID=comp139838_c0_seq1.path1;Name=comp139838_c0_seq1;Dir=antisensecoverage=91.2;identity=100.0;matches=714;mismatches=0;indels=0;unknowns=0;Target=comp139838_c0_seq1 62 214 .;locus=RLOC_00000049
ChrX	stalkie_big_nohaplotig	exon	1449935	1449948	100	+	.	Parent=comp139838_c0_seq1.mrna1;Target=comp139838_c0_seq1 721 734 -
ChrX	stalkie_big_nohaplotig	exon	1450724	1450731	100	+	.	Parent=comp139838_c0_seq1.mrna1;Target=comp139838_c0_seq1 713 720 -
ChrX	stalkie_big_nohaplotig	exon	1461822	1461824	100	+	.	Parent=comp139838_c0_seq1.mrna1;Target=comp139838_c0_seq1 710 712 -
ChrX	stalkie_big_nohaplotig	exon	1765582	1765635	100	+	.	Parent=comp139838_c0_seq1.mrna1;Target=comp139838_c0_seq1 656 709 -
ChrX	stalkie_big_nohaplotig	exon	1765703	1765768	100	+	.	Parent=comp139838_c0_seq1.mrna1;Target=comp139838_c0_seq1 590 655 -
ChrX	stalkie_big_nohaplotig	exon	1781638	1781756	100	+	.	Parent=comp139838_c0_seq1.mrna1;Target=comp139838_c0_seq1 471 589 -
ChrX	stalkie_big_nohaplotig	exon	1781811	1781903	100	+	.	Parent=comp139838_c0_seq1.mrna1;Target=comp139838_c0_seq1 378 470 -
ChrX	stalkie_big_nohaplotig	exon	1809915	1810271	100	+	.	Parent=comp139838_c0_seq1.mrna1;Target=comp139838_c0_seq1 21 377 -
ChrX	stalkie_big_nohaplotig	CDS	1810078	1810230	.	+	0	Parent=comp139838_c0_seq1.mrna1
ChrX	gffcl	locus	1551501	1552637	.	-	.	ID=RLOC_00000051;geneIDs=FBgn0031682.1.path1;transcripts=FBgn0031682.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1551501	1552637	.	-	.	ID=FBgn0031682.1.mrna1;geneID=FBgn0031682.1.path1;Name=FBgn0031682.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1137;mismatches=0;indels=0;unknowns=0;Target=FBgn0031682.1 1137 1 .;locus=RLOC_00000051
ChrX	stalkie_big_nohaplotig	exon	1551501	1552637	100	-	.	Parent=FBgn0031682.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1551501	1552637	.	-	0	Parent=FBgn0031682.1.mrna1
ChrX	gffcl	locus	1557106	1557739	.	+	.	ID=RLOC_00000052;geneIDs=FBgn0261608.2.path1;transcripts=FBgn0261608.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1557106	1557739	.	+	.	ID=FBgn0261608.2.mrna1;geneID=FBgn0261608.2.path1;Name=FBgn0261608.2;Dir=sensecoverage=100.0;identity=100.0;matches=324;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000052
ChrX	stalkie_big_nohaplotig	exon	1557106	1557156	100	+	.	Parent=FBgn0261608.2.mrna1;Target=FBgn0261608.2 1 51 +
ChrX	stalkie_big_nohaplotig	exon	1557389	1557517	100	+	.	Parent=FBgn0261608.2.mrna1;Target=FBgn0261608.2 52 180 +
ChrX	stalkie_big_nohaplotig	exon	1557596	1557739	100	+	.	Parent=FBgn0261608.2.mrna1;Target=FBgn0261608.2 181 324 +
ChrX	stalkie_big_nohaplotig	CDS	1557106	1557156	.	+	0	Parent=FBgn0261608.2.mrna1;Target=FBgn0261608.2 1 51 +
ChrX	stalkie_big_nohaplotig	CDS	1557389	1557517	.	+	0	Parent=FBgn0261608.2.mrna1;Target=FBgn0261608.2 52 180 +
ChrX	stalkie_big_nohaplotig	CDS	1557596	1557739	.	+	0	Parent=FBgn0261608.2.mrna1;Target=FBgn0261608.2 181 324 +
ChrX	gffcl	locus	1565214	1565499	.	-	.	ID=RLOC_00000053;geneIDs=comp66028_c0_seq1.path1;transcripts=comp66028_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1565214	1565499	.	-	.	ID=comp66028_c0_seq1.mrna1;geneID=comp66028_c0_seq1.path1;Name=comp66028_c0_seq1;Dir=indeterminatecoverage=96.9;identity=100.0;matches=286;mismatches=0;indels=0;unknowns=0;Target=comp66028_c0_seq1 295 10 .;CDS_Target=comp66028_c0_seq1 139 11 .;locus=RLOC_00000053
ChrX	stalkie_big_nohaplotig	exon	1565214	1565499	100	-	.	Parent=comp66028_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1565370	1565498	.	-	0	Parent=comp66028_c0_seq1.mrna1
ChrX	gffcl	locus	1565875	1566733	.	-	.	ID=RLOC_00000054;geneIDs=comp114848_c0_seq1.path1;transcripts=comp114848_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1565875	1566733	.	-	.	ID=comp114848_c0_seq1.mrna1;geneID=comp114848_c0_seq1.path1;Name=comp114848_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=859;mismatches=0;indels=0;unknowns=0;Target=comp114848_c0_seq1 859 1 .;CDS_Target=comp114848_c0_seq1 853 728 .;locus=RLOC_00000054
ChrX	stalkie_big_nohaplotig	exon	1565875	1566733	100	-	.	Parent=comp114848_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1565881	1566006	.	-	0	Parent=comp114848_c0_seq1.mrna1
ChrX	gffcl	locus	1568673	3286166	.	+	.	ID=RLOC_00000055;geneIDs=comp134957_c0_seq1.path1,comp138702_c1_seq1.path1;transcripts=comp138702_c1_seq1.mrna1,comp134957_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1568673	3284324	.	+	.	ID=comp138702_c1_seq1.mrna1;geneID=comp138702_c1_seq1.path1;Name=comp138702_c1_seq1;Dir=indeterminatecoverage=78.8;identity=92.7;matches=519;mismatches=19;indels=22;unknowns=0;Target=comp138702_c1_seq1 365 312 .;locus=RLOC_00000055
ChrX	stalkie_big_nohaplotig	exon	1568673	1569045	100	+	.	Parent=comp138702_c1_seq1.mrna1;Target=comp138702_c1_seq1 373 1 .
ChrX	stalkie_big_nohaplotig	exon	3200153	3200156	100	+	.	Parent=comp138702_c1_seq1.mrna1;Target=comp138702_c1_seq1 377 374 .
ChrX	stalkie_big_nohaplotig	exon	3202864	3202871	100	+	.	Parent=comp138702_c1_seq1.mrna1;Target=comp138702_c1_seq1 385 378 .
ChrX	stalkie_big_nohaplotig	exon	3203260	3203263	100	+	.	Parent=comp138702_c1_seq1.mrna1;Target=comp138702_c1_seq1 389 386 .
ChrX	stalkie_big_nohaplotig	exon	3206539	3206548	100	+	.	Parent=comp138702_c1_seq1.mrna1;Target=comp138702_c1_seq1 399 390 .
ChrX	stalkie_big_nohaplotig	exon	3214238	3214240	100	+	.	Parent=comp138702_c1_seq1.mrna1;Target=comp138702_c1_seq1 402 400 .
ChrX	stalkie_big_nohaplotig	exon	3226548	3226559	83	+	.	Parent=comp138702_c1_seq1.mrna1;Target=comp138702_c1_seq1 414 403 .
ChrX	stalkie_big_nohaplotig	exon	3229598	3229603	100	+	.	Parent=comp138702_c1_seq1.mrna1;Target=comp138702_c1_seq1 420 415 .
ChrX	stalkie_big_nohaplotig	exon	3232809	3232855	58	+	.	Parent=comp138702_c1_seq1.mrna1;Target=comp138702_c1_seq1 458 421 .
ChrX	stalkie_big_nohaplotig	exon	3241493	3241524	55	+	.	Parent=comp138702_c1_seq1.mrna1;Target=comp138702_c1_seq1 501 459 .
ChrX	stalkie_big_nohaplotig	exon	3246895	3246902	100	+	.	Parent=comp138702_c1_seq1.mrna1;Target=comp138702_c1_seq1 509 502 .
ChrX	stalkie_big_nohaplotig	exon	3248110	3248111	100	+	.	Parent=comp138702_c1_seq1.mrna1;Target=comp138702_c1_seq1 511 510 .
ChrX	stalkie_big_nohaplotig	exon	3248225	3248230	100	+	.	Parent=comp138702_c1_seq1.mrna1;Target=comp138702_c1_seq1 517 512 .
ChrX	stalkie_big_nohaplotig	exon	3264213	3264220	100	+	.	Parent=comp138702_c1_seq1.mrna1;Target=comp138702_c1_seq1 525 518 .
ChrX	stalkie_big_nohaplotig	exon	3265228	3265236	100	+	.	Parent=comp138702_c1_seq1.mrna1;Target=comp138702_c1_seq1 534 526 .
ChrX	stalkie_big_nohaplotig	exon	3273293	3273297	100	+	.	Parent=comp138702_c1_seq1.mrna1;Target=comp138702_c1_seq1 539 535 .
ChrX	stalkie_big_nohaplotig	exon	3278823	3278827	100	+	.	Parent=comp138702_c1_seq1.mrna1;Target=comp138702_c1_seq1 544 540 .
ChrX	stalkie_big_nohaplotig	exon	3284319	3284324	100	+	.	Parent=comp138702_c1_seq1.mrna1;Target=comp138702_c1_seq1 550 545 .
ChrX	stalkie_big_nohaplotig	CDS	1568984	1569037	.	+	0	Parent=comp138702_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3283628	3286166	.	+	.	ID=comp134957_c0_seq1.mrna1;geneID=comp134957_c0_seq1.path1;Name=comp134957_c0_seq1;Dir=sensecoverage=99.5;identity=99.3;matches=815;mismatches=0;indels=6;unknowns=0;locus=RLOC_00000055
ChrX	stalkie_big_nohaplotig	exon	3283628	3284038	98	+	.	Parent=comp134957_c0_seq1.mrna1;Target=comp134957_c0_seq1 1 415 +
ChrX	stalkie_big_nohaplotig	exon	3284134	3284241	100	+	.	Parent=comp134957_c0_seq1.mrna1;Target=comp134957_c0_seq1 416 523 +
ChrX	stalkie_big_nohaplotig	exon	3284304	3284375	100	+	.	Parent=comp134957_c0_seq1.mrna1;Target=comp134957_c0_seq1 524 595 +
ChrX	stalkie_big_nohaplotig	exon	3285942	3286166	100	+	.	Parent=comp134957_c0_seq1.mrna1;Target=comp134957_c0_seq1 596 820 +
ChrX	stalkie_big_nohaplotig	CDS	3283766	3284038	.	+	0	Parent=comp134957_c0_seq1.mrna1;Target=comp134957_c0_seq1 143 415 +
ChrX	stalkie_big_nohaplotig	CDS	3284134	3284241	.	+	0	Parent=comp134957_c0_seq1.mrna1;Target=comp134957_c0_seq1 416 523 +
ChrX	stalkie_big_nohaplotig	CDS	3284304	3284375	.	+	0	Parent=comp134957_c0_seq1.mrna1;Target=comp134957_c0_seq1 524 595 +
ChrX	stalkie_big_nohaplotig	CDS	3285942	3286091	.	+	0	Parent=comp134957_c0_seq1.mrna1;Target=comp134957_c0_seq1 596 745 +
ChrX	gffcl	locus	1570562	1606755	.	-	.	ID=RLOC_00000056;geneIDs=FBgn0031681.1.path1,comp115930_c0_seq1.path1;transcripts=FBgn0031681.1.mrna1,comp115930_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1570562	1606755	.	-	.	ID=FBgn0031681.1.mrna1;geneID=FBgn0031681.1.path1;Name=FBgn0031681.1;Dir=sensecoverage=100.0;identity=100.0;matches=1233;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000056
ChrX	stalkie_big_nohaplotig	exon	1570562	1570705	100	-	.	Parent=FBgn0031681.1.mrna1;Target=FBgn0031681.1 1090 1233 +
ChrX	stalkie_big_nohaplotig	exon	1570783	1571016	100	-	.	Parent=FBgn0031681.1.mrna1;Target=FBgn0031681.1 856 1089 +
ChrX	stalkie_big_nohaplotig	exon	1572711	1572850	100	-	.	Parent=FBgn0031681.1.mrna1;Target=FBgn0031681.1 716 855 +
ChrX	stalkie_big_nohaplotig	exon	1580384	1580564	100	-	.	Parent=FBgn0031681.1.mrna1;Target=FBgn0031681.1 535 715 +
ChrX	stalkie_big_nohaplotig	exon	1580927	1581104	100	-	.	Parent=FBgn0031681.1.mrna1;Target=FBgn0031681.1 357 534 +
ChrX	stalkie_big_nohaplotig	exon	1581645	1581841	100	-	.	Parent=FBgn0031681.1.mrna1;Target=FBgn0031681.1 160 356 +
ChrX	stalkie_big_nohaplotig	exon	1606535	1606656	100	-	.	Parent=FBgn0031681.1.mrna1;Target=FBgn0031681.1 38 159 +
ChrX	stalkie_big_nohaplotig	exon	1606719	1606755	100	-	.	Parent=FBgn0031681.1.mrna1;Target=FBgn0031681.1 1 37 +
ChrX	stalkie_big_nohaplotig	CDS	1570562	1570705	.	-	0	Parent=FBgn0031681.1.mrna1;Target=FBgn0031681.1 1090 1233 +
ChrX	stalkie_big_nohaplotig	CDS	1570783	1571016	.	-	0	Parent=FBgn0031681.1.mrna1;Target=FBgn0031681.1 856 1089 +
ChrX	stalkie_big_nohaplotig	CDS	1572711	1572850	.	-	2	Parent=FBgn0031681.1.mrna1;Target=FBgn0031681.1 716 855 +
ChrX	stalkie_big_nohaplotig	CDS	1580384	1580564	.	-	0	Parent=FBgn0031681.1.mrna1;Target=FBgn0031681.1 535 715 +
ChrX	stalkie_big_nohaplotig	CDS	1580927	1581104	.	-	1	Parent=FBgn0031681.1.mrna1;Target=FBgn0031681.1 357 534 +
ChrX	stalkie_big_nohaplotig	CDS	1581645	1581841	.	-	0	Parent=FBgn0031681.1.mrna1;Target=FBgn0031681.1 160 356 +
ChrX	stalkie_big_nohaplotig	CDS	1606535	1606656	.	-	2	Parent=FBgn0031681.1.mrna1;Target=FBgn0031681.1 38 159 +
ChrX	stalkie_big_nohaplotig	CDS	1606719	1606755	.	-	0	Parent=FBgn0031681.1.mrna1;Target=FBgn0031681.1 1 37 +
ChrX	stalkie_big_nohaplotig	mRNA	1572830	1573195	.	-	.	ID=comp115930_c0_seq1.mrna1;geneID=comp115930_c0_seq1.path1;Name=comp115930_c0_seq1;Dir=indeterminatecoverage=89.0;identity=97.9;matches=366;mismatches=0;indels=8;unknowns=0;Target=comp115930_c0_seq1 420 47 .;CDS_Target=comp115930_c0_seq1 97 47 .;locus=RLOC_00000056
ChrX	stalkie_big_nohaplotig	exon	1572830	1573195	97	-	.	Parent=comp115930_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1573145	1573195	.	-	0	Parent=comp115930_c0_seq1.mrna1
ChrX	gffcl	locus	1573837	1574934	.	-	.	ID=RLOC_00000058;geneIDs=comp91427_c0_seq1.path1;transcripts=comp91427_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1573837	1574934	.	-	.	ID=comp91427_c0_seq1.mrna1;geneID=comp91427_c0_seq1.path1;Name=comp91427_c0_seq1;Dir=indeterminatecoverage=98.4;identity=100.0;matches=1098;mismatches=0;indels=0;unknowns=0;Target=comp91427_c0_seq1 1098 1 .;CDS_Target=comp91427_c0_seq1 188 51 .;locus=RLOC_00000058
ChrX	stalkie_big_nohaplotig	exon	1573837	1574934	100	-	.	Parent=comp91427_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1574747	1574884	.	-	0	Parent=comp91427_c0_seq1.mrna1
ChrX	gffcl	locus	1577678	1578550	.	-	.	ID=RLOC_00000059;geneIDs=comp147814_c1_seq1.path1;transcripts=comp147814_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1577678	1578550	.	-	.	ID=comp147814_c1_seq1.mrna1;geneID=comp147814_c1_seq1.path1;Name=comp147814_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=873;mismatches=0;indels=0;unknowns=0;Target=comp147814_c1_seq1 873 1 .;CDS_Target=comp147814_c1_seq1 84 1 .;locus=RLOC_00000059
ChrX	stalkie_big_nohaplotig	exon	1577678	1578550	100	-	.	Parent=comp147814_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1578467	1578550	.	-	0	Parent=comp147814_c1_seq1.mrna1
ChrX	gffcl	locus	1579289	1579592	.	+	.	ID=RLOC_00000060;geneIDs=comp101211_c1_seq1.path1;transcripts=comp101211_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1579289	1579592	.	+	.	ID=comp101211_c1_seq1.mrna1;geneID=comp101211_c1_seq1.path1;Name=comp101211_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=303;mismatches=1;indels=0;unknowns=0;Target=comp101211_c1_seq1 304 1 .;CDS_Target=comp101211_c1_seq1 106 2 .;locus=RLOC_00000060
ChrX	stalkie_big_nohaplotig	exon	1579289	1579592	99	+	.	Parent=comp101211_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1579290	1579394	.	+	0	Parent=comp101211_c1_seq1.mrna1
ChrX	gffcl	locus	1594070	1595672	.	-	.	ID=RLOC_00000061;geneIDs=comp156604_c0_seq1.path1;transcripts=comp156604_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1594070	1595672	.	-	.	ID=comp156604_c0_seq1.mrna1;geneID=comp156604_c0_seq1.path1;Name=comp156604_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.4;matches=1594;mismatches=9;indels=0;unknowns=0;Target=comp156604_c0_seq1 1604 2 .;CDS_Target=comp156604_c0_seq1 1556 1404 .;locus=RLOC_00000061
ChrX	stalkie_big_nohaplotig	exon	1594070	1595672	99	-	.	Parent=comp156604_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1594118	1594270	.	-	0	Parent=comp156604_c0_seq1.mrna1
ChrX	gffcl	locus	1595706	1596054	.	+	.	ID=RLOC_00000062;geneIDs=comp154784_c0_seq1.path1;transcripts=comp154784_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1595706	1596054	.	+	.	ID=comp154784_c0_seq1.mrna1;geneID=comp154784_c0_seq1.path1;Name=comp154784_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=342;mismatches=7;indels=0;unknowns=0;Target=comp154784_c0_seq1 349 1 .;CDS_Target=comp154784_c0_seq1 252 154 .;locus=RLOC_00000062
ChrX	stalkie_big_nohaplotig	exon	1595706	1596054	97	+	.	Parent=comp154784_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1595859	1595957	.	+	0	Parent=comp154784_c0_seq1.mrna1
ChrX	gffcl	locus	1596518	1597136	.	-	.	ID=RLOC_00000063;geneIDs=comp140512_c0_seq1.path1;transcripts=comp140512_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1596518	1597136	.	-	.	ID=comp140512_c0_seq1.mrna1;geneID=comp140512_c0_seq1.path1;Name=comp140512_c0_seq1;Dir=indeterminatecoverage=99.5;identity=94.0;matches=391;mismatches=6;indels=19;unknowns=0;Target=comp140512_c0_seq1 393 283 .;locus=RLOC_00000063
ChrX	stalkie_big_nohaplotig	exon	1596518	1596752	90	-	.	Parent=comp140512_c0_seq1.mrna1;Target=comp140512_c0_seq1 408 171 .
ChrX	stalkie_big_nohaplotig	exon	1596967	1597136	98	-	.	Parent=comp140512_c0_seq1.mrna1;Target=comp140512_c0_seq1 170 1 .
ChrX	stalkie_big_nohaplotig	CDS	1596533	1596643	.	-	0	Parent=comp140512_c0_seq1.mrna1
ChrX	gffcl	locus	1597402	3477342	.	+	.	ID=RLOC_00000064;geneIDs=comp147513_c0_seq1.path1;transcripts=comp147513_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1597402	3477342	.	+	.	ID=comp147513_c0_seq1.mrna1;geneID=comp147513_c0_seq1.path1;Name=comp147513_c0_seq1;Dir=sensecoverage=74.4;identity=95.6;matches=498;mismatches=11;indels=12;unknowns=0;Target=comp147513_c0_seq1 2 37 +;locus=RLOC_00000064
ChrX	stalkie_big_nohaplotig	exon	1597402	1597740	99	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 1 339 +
ChrX	stalkie_big_nohaplotig	exon	3331520	3331523	100	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 340 343 +
ChrX	stalkie_big_nohaplotig	exon	3337665	3337666	100	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 344 345 +
ChrX	stalkie_big_nohaplotig	exon	3342740	3342748	100	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 346 354 +
ChrX	stalkie_big_nohaplotig	exon	3343342	3343345	100	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 355 358 +
ChrX	stalkie_big_nohaplotig	exon	3347453	3347456	100	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 359 362 +
ChrX	stalkie_big_nohaplotig	exon	3348420	3348424	100	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 363 367 +
ChrX	stalkie_big_nohaplotig	exon	3371965	3371970	100	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 368 373 +
ChrX	stalkie_big_nohaplotig	exon	3382853	3382855	100	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 374 376 +
ChrX	stalkie_big_nohaplotig	exon	3398083	3398091	100	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 377 385 +
ChrX	stalkie_big_nohaplotig	exon	3405841	3405848	100	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 386 393 +
ChrX	stalkie_big_nohaplotig	exon	3412745	3412747	100	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 394 396 +
ChrX	stalkie_big_nohaplotig	exon	3420214	3420215	100	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 397 398 +
ChrX	stalkie_big_nohaplotig	exon	3422383	3422397	93	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 399 413 +
ChrX	stalkie_big_nohaplotig	exon	3431436	3431439	100	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 414 417 +
ChrX	stalkie_big_nohaplotig	exon	3433100	3433104	100	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 436 440 +
ChrX	stalkie_big_nohaplotig	exon	3433895	3433897	100	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 441 443 +
ChrX	stalkie_big_nohaplotig	exon	3440092	3440099	100	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 444 451 +
ChrX	stalkie_big_nohaplotig	exon	3443649	3443652	100	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 452 455 +
ChrX	stalkie_big_nohaplotig	exon	3446046	3446050	100	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 456 460 +
ChrX	stalkie_big_nohaplotig	exon	3447079	3447100	77	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 461 479 +
ChrX	stalkie_big_nohaplotig	exon	3450333	3450346	78	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 480 493 +
ChrX	stalkie_big_nohaplotig	exon	3457539	3457545	85	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 494 500 +
ChrX	stalkie_big_nohaplotig	exon	3461968	3461969	100	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 501 502 +
ChrX	stalkie_big_nohaplotig	exon	3468762	3468765	100	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 503 506 +
ChrX	stalkie_big_nohaplotig	exon	3472395	3472396	100	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 507 508 +
ChrX	stalkie_big_nohaplotig	exon	3473008	3473028	52	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 509 520 +
ChrX	stalkie_big_nohaplotig	exon	3477337	3477342	100	+	.	Parent=comp147513_c0_seq1.mrna1;Target=comp147513_c0_seq1 521 526 +
ChrX	stalkie_big_nohaplotig	CDS	1597403	1597438	.	+	0	Parent=comp147513_c0_seq1.mrna1
ChrX	gffcl	locus	1597826	1598321	.	+	.	ID=RLOC_00000065;geneIDs=comp142816_c0_seq1.path2;transcripts=comp142816_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	1597826	1598321	.	+	.	ID=comp142816_c0_seq1.mrna2;geneID=comp142816_c0_seq1.path2;Name=comp142816_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=494;mismatches=2;indels=1;unknowns=0;Target=comp142816_c0_seq1 497 1 .;CDS_Target=comp142816_c0_seq1 485 345 .;locus=RLOC_00000065
ChrX	stalkie_big_nohaplotig	exon	1597826	1598321	99	+	.	Parent=comp142816_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	1598170	1598309	.	+	0	Parent=comp142816_c0_seq1.mrna2
ChrX	gffcl	locus	1665490	1666383	.	+	.	ID=RLOC_00000066;geneIDs=comp151191_c0_seq1.path1;transcripts=comp151191_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1665490	1666383	.	+	.	ID=comp151191_c0_seq1.mrna1;geneID=comp151191_c0_seq1.path1;Name=comp151191_c0_seq1;Dir=sensecoverage=98.4;identity=98.6;matches=773;mismatches=7;indels=4;unknowns=0;locus=RLOC_00000066
ChrX	stalkie_big_nohaplotig	exon	1665490	1665626	97	+	.	Parent=comp151191_c0_seq1.mrna1;Target=comp151191_c0_seq1 1 137 +
ChrX	stalkie_big_nohaplotig	exon	1665684	1665876	100	+	.	Parent=comp151191_c0_seq1.mrna1;Target=comp151191_c0_seq1 138 330 +
ChrX	stalkie_big_nohaplotig	exon	1665934	1666383	98	+	.	Parent=comp151191_c0_seq1.mrna1;Target=comp151191_c0_seq1 331 784 +
ChrX	stalkie_big_nohaplotig	CDS	1665585	1665626	.	+	0	Parent=comp151191_c0_seq1.mrna1;Target=comp151191_c0_seq1 96 137 +
ChrX	stalkie_big_nohaplotig	CDS	1665684	1665710	.	+	0	Parent=comp151191_c0_seq1.mrna1;Target=comp151191_c0_seq1 138 164 +
ChrX	gffcl	locus	1669184	1669687	.	-	.	ID=RLOC_00000067;geneIDs=comp298459_c0_seq1.path1;transcripts=comp298459_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1669184	1669687	.	-	.	ID=comp298459_c0_seq1.mrna1;geneID=comp298459_c0_seq1.path1;Name=comp298459_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=499;mismatches=4;indels=1;unknowns=0;Target=comp298459_c0_seq1 503 1 .;CDS_Target=comp298459_c0_seq1 501 379 .;locus=RLOC_00000067
ChrX	stalkie_big_nohaplotig	exon	1669184	1669687	99	-	.	Parent=comp298459_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1669186	1669309	.	-	0	Parent=comp298459_c0_seq1.mrna1
ChrX	gffcl	locus	1670519	1719585	.	-	.	ID=RLOC_00000068;geneIDs=FBgn0028572.1.path1,comp50549_c0_seq1.path1;transcripts=FBgn0028572.1.mrna1,comp50549_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1670519	1702216	.	-	.	ID=FBgn0028572.1.mrna1;geneID=FBgn0028572.1.path1;Name=FBgn0028572.1;Dir=sensecoverage=100.0;identity=100.0;matches=3512;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000068
ChrX	stalkie_big_nohaplotig	exon	1670519	1670719	100	-	.	Parent=FBgn0028572.1.mrna1;Target=FBgn0028572.1 3313 3513 +
ChrX	stalkie_big_nohaplotig	exon	1677419	1677508	100	-	.	Parent=FBgn0028572.1.mrna1;Target=FBgn0028572.1 3223 3312 +
ChrX	stalkie_big_nohaplotig	exon	1680590	1680685	100	-	.	Parent=FBgn0028572.1.mrna1;Target=FBgn0028572.1 3127 3222 +
ChrX	stalkie_big_nohaplotig	exon	1680853	1681753	100	-	.	Parent=FBgn0028572.1.mrna1;Target=FBgn0028572.1 2226 3126 +
ChrX	stalkie_big_nohaplotig	exon	1686049	1686674	100	-	.	Parent=FBgn0028572.1.mrna1;Target=FBgn0028572.1 1600 2225 +
ChrX	stalkie_big_nohaplotig	exon	1700618	1702216	99	-	.	Parent=FBgn0028572.1.mrna1;Target=FBgn0028572.1 1 1599 +
ChrX	stalkie_big_nohaplotig	CDS	1670519	1670719	.	-	0	Parent=FBgn0028572.1.mrna1;Target=FBgn0028572.1 3313 3513 +
ChrX	stalkie_big_nohaplotig	CDS	1677419	1677508	.	-	0	Parent=FBgn0028572.1.mrna1;Target=FBgn0028572.1 3223 3312 +
ChrX	stalkie_big_nohaplotig	CDS	1680590	1680685	.	-	0	Parent=FBgn0028572.1.mrna1;Target=FBgn0028572.1 3127 3222 +
ChrX	stalkie_big_nohaplotig	CDS	1680853	1681753	.	-	1	Parent=FBgn0028572.1.mrna1;Target=FBgn0028572.1 2226 3126 +
ChrX	stalkie_big_nohaplotig	CDS	1686049	1686674	.	-	0	Parent=FBgn0028572.1.mrna1;Target=FBgn0028572.1 1600 2225 +
ChrX	stalkie_big_nohaplotig	CDS	1700618	1702216	.	-	0	Parent=FBgn0028572.1.mrna1;Target=FBgn0028572.1 1 1599 +
ChrX	stalkie_big_nohaplotig	mRNA	1702178	1719585	.	-	.	ID=comp50549_c0_seq1.mrna1;geneID=comp50549_c0_seq1.path1;Name=comp50549_c0_seq1;Dir=sensecoverage=100.0;identity=99.2;matches=381;mismatches=2;indels=1;unknowns=0;Target=comp50549_c0_seq1 82 240 +;locus=RLOC_00000068
ChrX	stalkie_big_nohaplotig	exon	1702178	1702217	97	-	.	Parent=comp50549_c0_seq1.mrna1;Target=comp50549_c0_seq1 345 384 +
ChrX	stalkie_big_nohaplotig	exon	1719243	1719585	99	-	.	Parent=comp50549_c0_seq1.mrna1;Target=comp50549_c0_seq1 1 344 +
ChrX	stalkie_big_nohaplotig	CDS	1719347	1719505	.	-	0	Parent=comp50549_c0_seq1.mrna1
ChrX	gffcl	locus	1670897	1671263	.	-	.	ID=RLOC_00000069;geneIDs=comp104272_c0_seq1.path1;transcripts=comp104272_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1670897	1671263	.	-	.	ID=comp104272_c0_seq1.mrna1;geneID=comp104272_c0_seq1.path1;Name=comp104272_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=367;mismatches=0;indels=0;unknowns=0;Target=comp104272_c0_seq1 367 1 .;CDS_Target=comp104272_c0_seq1 94 68 .;locus=RLOC_00000069
ChrX	stalkie_big_nohaplotig	exon	1670897	1671263	100	-	.	Parent=comp104272_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1671170	1671196	.	-	0	Parent=comp104272_c0_seq1.mrna1
ChrX	gffcl	locus	1671928	1672371	.	-	.	ID=RLOC_00000070;geneIDs=comp128397_c1_seq1.path1;transcripts=comp128397_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1671928	1672371	.	-	.	ID=comp128397_c1_seq1.mrna1;geneID=comp128397_c1_seq1.path1;Name=comp128397_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=443;mismatches=1;indels=0;unknowns=0;Target=comp128397_c1_seq1 444 1 .;CDS_Target=comp128397_c1_seq1 135 76 .;locus=RLOC_00000070
ChrX	stalkie_big_nohaplotig	exon	1671928	1672371	99	-	.	Parent=comp128397_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1672237	1672296	.	-	0	Parent=comp128397_c1_seq1.mrna1
ChrX	gffcl	locus	1691393	1691502	.	-	.	ID=RLOC_00000071;geneIDs=comp118874_c0_seq1.path2;transcripts=comp118874_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	1691393	1691502	.	-	.	ID=comp118874_c0_seq1.mrna2;geneID=comp118874_c0_seq1.path2;Name=comp118874_c0_seq1;Dir=indeterminatecoverage=16.9;identity=99.1;matches=109;mismatches=1;indels=0;unknowns=0;Target=comp118874_c0_seq1 650 541 .;locus=RLOC_00000071
ChrX	stalkie_big_nohaplotig	exon	1691393	1691502	99	-	.	Parent=comp118874_c0_seq1.mrna2
ChrX	gffcl	locus	1706944	1707840	.	-	.	ID=RLOC_00000072;geneIDs=Dv_FBgn0208189.1.path1;transcripts=Dv_FBgn0208189.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1706944	1707840	.	-	.	ID=Dv_FBgn0208189.1.mrna1;geneID=Dv_FBgn0208189.1.path1;Name=Dv_FBgn0208189.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=896;mismatches=1;indels=0;unknowns=0;Target=Dv_FBgn0208189.1 897 1 .;locus=RLOC_00000072
ChrX	stalkie_big_nohaplotig	exon	1706944	1707840	99	-	.	Parent=Dv_FBgn0208189.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1706944	1707840	.	-	0	Parent=Dv_FBgn0208189.1.mrna1
ChrX	gffcl	locus	1748896	1755041	.	+	.	ID=RLOC_00000074;geneIDs=FBgn0031676.1.path1;transcripts=FBgn0031676.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1748896	1755041	.	+	.	ID=FBgn0031676.1.mrna1;geneID=FBgn0031676.1.path1;Name=FBgn0031676.1;Dir=sensecoverage=100.0;identity=100.0;matches=1182;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000074
ChrX	stalkie_big_nohaplotig	exon	1748896	1748998	100	+	.	Parent=FBgn0031676.1.mrna1;Target=FBgn0031676.1 1 103 +
ChrX	stalkie_big_nohaplotig	exon	1749062	1749179	100	+	.	Parent=FBgn0031676.1.mrna1;Target=FBgn0031676.1 104 221 +
ChrX	stalkie_big_nohaplotig	exon	1751857	1752043	100	+	.	Parent=FBgn0031676.1.mrna1;Target=FBgn0031676.1 222 408 +
ChrX	stalkie_big_nohaplotig	exon	1754268	1755041	100	+	.	Parent=FBgn0031676.1.mrna1;Target=FBgn0031676.1 409 1182 +
ChrX	stalkie_big_nohaplotig	CDS	1748896	1748998	.	+	0	Parent=FBgn0031676.1.mrna1;Target=FBgn0031676.1 1 103 +
ChrX	stalkie_big_nohaplotig	CDS	1749062	1749179	.	+	2	Parent=FBgn0031676.1.mrna1;Target=FBgn0031676.1 104 221 +
ChrX	stalkie_big_nohaplotig	CDS	1751857	1752043	.	+	1	Parent=FBgn0031676.1.mrna1;Target=FBgn0031676.1 222 408 +
ChrX	stalkie_big_nohaplotig	CDS	1754268	1755041	.	+	0	Parent=FBgn0031676.1.mrna1;Target=FBgn0031676.1 409 1182 +
ChrX	gffcl	locus	1755515	1756010	.	+	.	ID=RLOC_00000075;geneIDs=comp78400_c0_seq1.path1;transcripts=comp78400_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1755515	1756010	.	+	.	ID=comp78400_c0_seq1.mrna1;geneID=comp78400_c0_seq1.path1;Name=comp78400_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=496;mismatches=0;indels=0;unknowns=0;Target=comp78400_c0_seq1 496 1 .;CDS_Target=comp78400_c0_seq1 471 421 .;locus=RLOC_00000075
ChrX	stalkie_big_nohaplotig	exon	1755515	1756010	100	+	.	Parent=comp78400_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1755935	1755985	.	+	0	Parent=comp78400_c0_seq1.mrna1
ChrX	gffcl	locus	1761398	1763049	.	-	.	ID=RLOC_00000076;geneIDs=FBgn0022023.2.path1,comp545117_c0_seq1.path1;transcripts=FBgn0022023.2.mrna1,comp545117_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1761398	1763049	.	-	.	ID=FBgn0022023.2.mrna1;geneID=FBgn0022023.2.path1;Name=FBgn0022023.2;Dir=sensecoverage=100.0;identity=100.0;matches=1164;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000076
ChrX	stalkie_big_nohaplotig	exon	1761398	1761655	100	-	.	Parent=FBgn0022023.2.mrna1;Target=FBgn0022023.2 907 1164 +
ChrX	stalkie_big_nohaplotig	exon	1761843	1762520	100	-	.	Parent=FBgn0022023.2.mrna1;Target=FBgn0022023.2 229 906 +
ChrX	stalkie_big_nohaplotig	exon	1762822	1763049	100	-	.	Parent=FBgn0022023.2.mrna1;Target=FBgn0022023.2 1 228 +
ChrX	stalkie_big_nohaplotig	CDS	1761398	1761655	.	-	0	Parent=FBgn0022023.2.mrna1;Target=FBgn0022023.2 907 1164 +
ChrX	stalkie_big_nohaplotig	CDS	1761843	1762520	.	-	0	Parent=FBgn0022023.2.mrna1;Target=FBgn0022023.2 229 906 +
ChrX	stalkie_big_nohaplotig	CDS	1762822	1763049	.	-	0	Parent=FBgn0022023.2.mrna1;Target=FBgn0022023.2 1 228 +
ChrX	stalkie_big_nohaplotig	mRNA	1762628	1762843	.	-	.	ID=comp545117_c0_seq1.mrna1;geneID=comp545117_c0_seq1.path1;Name=comp545117_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=216;mismatches=0;indels=0;unknowns=0;Target=comp545117_c0_seq1 216 1 .;CDS_Target=comp545117_c0_seq1 94 2 .;locus=RLOC_00000076
ChrX	stalkie_big_nohaplotig	exon	1762628	1762843	100	-	.	Parent=comp545117_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1762750	1762842	.	-	0	Parent=comp545117_c0_seq1.mrna1
ChrX	gffcl	locus	1768778	1769838	.	-	.	ID=RLOC_00000077;geneIDs=FBgn0032247.1.path1;transcripts=FBgn0032247.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1768778	1769838	.	-	.	ID=FBgn0032247.1.mrna1;geneID=FBgn0032247.1.path1;Name=FBgn0032247.1;Dir=sensecoverage=100.0;identity=99.9;matches=875;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000077
ChrX	stalkie_big_nohaplotig	exon	1768778	1768965	100	-	.	Parent=FBgn0032247.1.mrna1;Target=FBgn0032247.1 689 876 +
ChrX	stalkie_big_nohaplotig	exon	1769033	1769486	99	-	.	Parent=FBgn0032247.1.mrna1;Target=FBgn0032247.1 235 688 +
ChrX	stalkie_big_nohaplotig	exon	1769550	1769766	100	-	.	Parent=FBgn0032247.1.mrna1;Target=FBgn0032247.1 18 234 +
ChrX	stalkie_big_nohaplotig	exon	1769822	1769838	100	-	.	Parent=FBgn0032247.1.mrna1;Target=FBgn0032247.1 1 17 +
ChrX	stalkie_big_nohaplotig	CDS	1768778	1768965	.	-	2	Parent=FBgn0032247.1.mrna1;Target=FBgn0032247.1 689 876 +
ChrX	stalkie_big_nohaplotig	CDS	1769033	1769486	.	-	0	Parent=FBgn0032247.1.mrna1;Target=FBgn0032247.1 235 688 +
ChrX	stalkie_big_nohaplotig	CDS	1769550	1769766	.	-	1	Parent=FBgn0032247.1.mrna1;Target=FBgn0032247.1 18 234 +
ChrX	stalkie_big_nohaplotig	CDS	1769822	1769838	.	-	0	Parent=FBgn0032247.1.mrna1;Target=FBgn0032247.1 1 17 +
ChrX	gffcl	locus	1783804	1785135	.	-	.	ID=RLOC_00000078;geneIDs=comp736959_c0_seq1.path1;transcripts=comp736959_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1783804	1785135	.	-	.	ID=comp736959_c0_seq1.mrna1;geneID=comp736959_c0_seq1.path1;Name=comp736959_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=1264;mismatches=0;indels=0;unknowns=0;Target=comp736959_c0_seq1 755 913 +;locus=RLOC_00000078
ChrX	stalkie_big_nohaplotig	exon	1783804	1785033	100	-	.	Parent=comp736959_c0_seq1.mrna1;Target=comp736959_c0_seq1 35 1264 +
ChrX	stalkie_big_nohaplotig	exon	1785102	1785135	100	-	.	Parent=comp736959_c0_seq1.mrna1;Target=comp736959_c0_seq1 1 34 +
ChrX	stalkie_big_nohaplotig	CDS	1784155	1784313	.	-	0	Parent=comp736959_c0_seq1.mrna1
ChrX	gffcl	locus	1831674	1832447	.	+	.	ID=RLOC_00000079;geneIDs=comp161870_c0_seq1.path5;transcripts=comp161870_c0_seq1.mrna5
ChrX	stalkie_big_nohaplotig	mRNA	1831674	1832447	.	+	.	ID=comp161870_c0_seq1.mrna5;geneID=comp161870_c0_seq1.path5;Name=comp161870_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.9;matches=743;mismatches=11;indels=21;unknowns=0;Target=comp161870_c0_seq1 755 1 .;CDS_Target=comp161870_c0_seq1 316 206 .;locus=RLOC_00000079
ChrX	stalkie_big_nohaplotig	exon	1831674	1832447	95	+	.	Parent=comp161870_c0_seq1.mrna5
ChrX	stalkie_big_nohaplotig	CDS	1831879	1831988	.	+	0	Parent=comp161870_c0_seq1.mrna5
ChrX	gffcl	locus	1846168	1847203	.	+	.	ID=RLOC_00000080;geneIDs=ORF1572.path1;transcripts=ORF1572.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1846168	1847203	.	+	.	ID=ORF1572.mrna1;geneID=ORF1572.path1;Name=ORF1572;Dir=indeterminatecoverage=97.8;identity=100.0;matches=1036;mismatches=0;indels=0;unknowns=0;Target=ORF1572 1036 1 .;CDS_Target=ORF1572 1035 1 .;locus=RLOC_00000080
ChrX	stalkie_big_nohaplotig	exon	1846168	1847203	100	+	.	Parent=ORF1572.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1846168	1847202	.	+	0	Parent=ORF1572.mrna1
ChrX	gffcl	locus	1911132	1913274	.	+	.	ID=RLOC_00000081;geneIDs=FBgn0032230.1.path1;transcripts=FBgn0032230.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1911132	1913274	.	+	.	ID=FBgn0032230.1.mrna1;geneID=FBgn0032230.1.path1;Name=FBgn0032230.1;Dir=sensecoverage=100.0;identity=100.0;matches=801;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000081
ChrX	stalkie_big_nohaplotig	exon	1911132	1911210	100	+	.	Parent=FBgn0032230.1.mrna1;Target=FBgn0032230.1 1 79 +
ChrX	stalkie_big_nohaplotig	exon	1911502	1911665	100	+	.	Parent=FBgn0032230.1.mrna1;Target=FBgn0032230.1 80 243 +
ChrX	stalkie_big_nohaplotig	exon	1911735	1911925	100	+	.	Parent=FBgn0032230.1.mrna1;Target=FBgn0032230.1 244 434 +
ChrX	stalkie_big_nohaplotig	exon	1912908	1913274	100	+	.	Parent=FBgn0032230.1.mrna1;Target=FBgn0032230.1 435 801 +
ChrX	stalkie_big_nohaplotig	CDS	1911132	1911210	.	+	0	Parent=FBgn0032230.1.mrna1;Target=FBgn0032230.1 1 79 +
ChrX	stalkie_big_nohaplotig	CDS	1911502	1911665	.	+	2	Parent=FBgn0032230.1.mrna1;Target=FBgn0032230.1 80 243 +
ChrX	stalkie_big_nohaplotig	CDS	1911735	1911925	.	+	0	Parent=FBgn0032230.1.mrna1;Target=FBgn0032230.1 244 434 +
ChrX	stalkie_big_nohaplotig	CDS	1912908	1913274	.	+	1	Parent=FBgn0032230.1.mrna1;Target=FBgn0032230.1 435 801 +
ChrX	gffcl	locus	1913475	1914307	.	-	.	ID=RLOC_00000082;geneIDs=comp101167_c0_seq1.path1;transcripts=comp101167_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1913475	1914307	.	-	.	ID=comp101167_c0_seq1.mrna1;geneID=comp101167_c0_seq1.path1;Name=comp101167_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=833;mismatches=0;indels=0;unknowns=0;Target=comp101167_c0_seq1 833 1 .;CDS_Target=comp101167_c0_seq1 280 116 .;locus=RLOC_00000082
ChrX	stalkie_big_nohaplotig	exon	1913475	1914307	100	-	.	Parent=comp101167_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1914028	1914192	.	-	0	Parent=comp101167_c0_seq1.mrna1
ChrX	gffcl	locus	1915978	1916717	.	-	.	ID=RLOC_00000083;geneIDs=comp93129_c0_seq1.path1;transcripts=comp93129_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1915978	1916717	.	-	.	ID=comp93129_c0_seq1.mrna1;geneID=comp93129_c0_seq1.path1;Name=comp93129_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=739;mismatches=1;indels=0;unknowns=0;Target=comp93129_c0_seq1 740 1 .;CDS_Target=comp93129_c0_seq1 382 176 .;locus=RLOC_00000083
ChrX	stalkie_big_nohaplotig	exon	1915978	1916717	99	-	.	Parent=comp93129_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1916336	1916542	.	-	0	Parent=comp93129_c0_seq1.mrna1
ChrX	gffcl	locus	1917516	1918204	.	+	.	ID=RLOC_00000084;geneIDs=FBgn0010520.1.path1;transcripts=FBgn0010520.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1917516	1918204	.	+	.	ID=FBgn0010520.1.mrna1;geneID=FBgn0010520.1.path1;Name=FBgn0010520.1;Dir=sensecoverage=100.0;identity=100.0;matches=630;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000084
ChrX	stalkie_big_nohaplotig	exon	1917516	1917548	100	+	.	Parent=FBgn0010520.1.mrna1;Target=FBgn0010520.1 1 33 +
ChrX	stalkie_big_nohaplotig	exon	1917608	1918204	100	+	.	Parent=FBgn0010520.1.mrna1;Target=FBgn0010520.1 34 630 +
ChrX	stalkie_big_nohaplotig	CDS	1917516	1917548	.	+	0	Parent=FBgn0010520.1.mrna1;Target=FBgn0010520.1 1 33 +
ChrX	stalkie_big_nohaplotig	CDS	1917608	1918204	.	+	0	Parent=FBgn0010520.1.mrna1;Target=FBgn0010520.1 34 630 +
ChrX	gffcl	locus	1920189	1926971	.	-	.	ID=RLOC_00000085;geneIDs=FBgn0032444.1.path1;transcripts=FBgn0032444.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1920189	1926971	.	-	.	ID=FBgn0032444.1.mrna1;geneID=FBgn0032444.1.path1;Name=FBgn0032444.1;Dir=sensecoverage=100.0;identity=100.0;matches=1632;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000085
ChrX	stalkie_big_nohaplotig	exon	1920189	1920203	100	-	.	Parent=FBgn0032444.1.mrna1;Target=FBgn0032444.1 1618 1632 +
ChrX	stalkie_big_nohaplotig	exon	1920265	1920949	100	-	.	Parent=FBgn0032444.1.mrna1;Target=FBgn0032444.1 933 1617 +
ChrX	stalkie_big_nohaplotig	exon	1921423	1921562	100	-	.	Parent=FBgn0032444.1.mrna1;Target=FBgn0032444.1 793 932 +
ChrX	stalkie_big_nohaplotig	exon	1921623	1922275	100	-	.	Parent=FBgn0032444.1.mrna1;Target=FBgn0032444.1 140 792 +
ChrX	stalkie_big_nohaplotig	exon	1926833	1926971	100	-	.	Parent=FBgn0032444.1.mrna1;Target=FBgn0032444.1 1 139 +
ChrX	stalkie_big_nohaplotig	CDS	1920189	1920203	.	-	0	Parent=FBgn0032444.1.mrna1;Target=FBgn0032444.1 1618 1632 +
ChrX	stalkie_big_nohaplotig	CDS	1920265	1920949	.	-	1	Parent=FBgn0032444.1.mrna1;Target=FBgn0032444.1 933 1617 +
ChrX	stalkie_big_nohaplotig	CDS	1921423	1921562	.	-	0	Parent=FBgn0032444.1.mrna1;Target=FBgn0032444.1 793 932 +
ChrX	stalkie_big_nohaplotig	CDS	1921623	1922275	.	-	2	Parent=FBgn0032444.1.mrna1;Target=FBgn0032444.1 140 792 +
ChrX	stalkie_big_nohaplotig	CDS	1926833	1926971	.	-	0	Parent=FBgn0032444.1.mrna1;Target=FBgn0032444.1 1 139 +
ChrX	gffcl	locus	1929308	1932963	.	+	.	ID=RLOC_00000086;geneIDs=FBgn0032397.1.path1;transcripts=FBgn0032397.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1929308	1932963	.	+	.	ID=FBgn0032397.1.mrna1;geneID=FBgn0032397.1.path1;Name=FBgn0032397.1;Dir=sensecoverage=100.0;identity=100.0;matches=1770;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000086
ChrX	stalkie_big_nohaplotig	exon	1929308	1930268	100	+	.	Parent=FBgn0032397.1.mrna1;Target=FBgn0032397.1 1 961 +
ChrX	stalkie_big_nohaplotig	exon	1932155	1932963	100	+	.	Parent=FBgn0032397.1.mrna1;Target=FBgn0032397.1 962 1770 +
ChrX	stalkie_big_nohaplotig	CDS	1929308	1930268	.	+	0	Parent=FBgn0032397.1.mrna1;Target=FBgn0032397.1 1 961 +
ChrX	stalkie_big_nohaplotig	CDS	1932155	1932963	.	+	2	Parent=FBgn0032397.1.mrna1;Target=FBgn0032397.1 962 1770 +
ChrX	gffcl	locus	1934417	1939193	.	-	.	ID=RLOC_00000087;geneIDs=FBgn0010497.3.path1;transcripts=FBgn0010497.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1934417	1939193	.	-	.	ID=FBgn0010497.3.mrna1;geneID=FBgn0010497.3.path1;Name=FBgn0010497.3;Dir=sensecoverage=100.0;identity=99.9;matches=1433;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000087
ChrX	stalkie_big_nohaplotig	exon	1934417	1934545	100	-	.	Parent=FBgn0010497.3.mrna1;Target=FBgn0010497.3 1306 1434 +
ChrX	stalkie_big_nohaplotig	exon	1937620	1937849	100	-	.	Parent=FBgn0010497.3.mrna1;Target=FBgn0010497.3 1076 1305 +
ChrX	stalkie_big_nohaplotig	exon	1937906	1938284	100	-	.	Parent=FBgn0010497.3.mrna1;Target=FBgn0010497.3 697 1075 +
ChrX	stalkie_big_nohaplotig	exon	1938421	1938873	99	-	.	Parent=FBgn0010497.3.mrna1;Target=FBgn0010497.3 244 696 +
ChrX	stalkie_big_nohaplotig	exon	1938951	1939193	100	-	.	Parent=FBgn0010497.3.mrna1;Target=FBgn0010497.3 1 243 +
ChrX	stalkie_big_nohaplotig	CDS	1934417	1934545	.	-	0	Parent=FBgn0010497.3.mrna1;Target=FBgn0010497.3 1306 1434 +
ChrX	stalkie_big_nohaplotig	CDS	1937620	1937849	.	-	2	Parent=FBgn0010497.3.mrna1;Target=FBgn0010497.3 1076 1305 +
ChrX	stalkie_big_nohaplotig	CDS	1937906	1938284	.	-	0	Parent=FBgn0010497.3.mrna1;Target=FBgn0010497.3 697 1075 +
ChrX	stalkie_big_nohaplotig	CDS	1938421	1938873	.	-	0	Parent=FBgn0010497.3.mrna1;Target=FBgn0010497.3 244 696 +
ChrX	stalkie_big_nohaplotig	CDS	1938951	1939193	.	-	0	Parent=FBgn0010497.3.mrna1;Target=FBgn0010497.3 1 243 +
ChrX	gffcl	locus	1948021	1949806	.	-	.	ID=RLOC_00000088;geneIDs=FBgn0010497.2.path1;transcripts=FBgn0010497.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1948021	1949806	.	-	.	ID=FBgn0010497.2.mrna1;geneID=FBgn0010497.2.path1;Name=FBgn0010497.2;Dir=sensecoverage=100.0;identity=100.0;matches=1473;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000088
ChrX	stalkie_big_nohaplotig	exon	1948021	1948149	100	-	.	Parent=FBgn0010497.2.mrna1;Target=FBgn0010497.2 1345 1473 +
ChrX	stalkie_big_nohaplotig	exon	1948260	1948498	100	-	.	Parent=FBgn0010497.2.mrna1;Target=FBgn0010497.2 1106 1344 +
ChrX	stalkie_big_nohaplotig	exon	1948559	1948943	100	-	.	Parent=FBgn0010497.2.mrna1;Target=FBgn0010497.2 721 1105 +
ChrX	stalkie_big_nohaplotig	exon	1949003	1949452	100	-	.	Parent=FBgn0010497.2.mrna1;Target=FBgn0010497.2 271 720 +
ChrX	stalkie_big_nohaplotig	exon	1949537	1949806	100	-	.	Parent=FBgn0010497.2.mrna1;Target=FBgn0010497.2 1 270 +
ChrX	stalkie_big_nohaplotig	CDS	1948021	1948149	.	-	0	Parent=FBgn0010497.2.mrna1;Target=FBgn0010497.2 1345 1473 +
ChrX	stalkie_big_nohaplotig	CDS	1948260	1948498	.	-	2	Parent=FBgn0010497.2.mrna1;Target=FBgn0010497.2 1106 1344 +
ChrX	stalkie_big_nohaplotig	CDS	1948559	1948943	.	-	0	Parent=FBgn0010497.2.mrna1;Target=FBgn0010497.2 721 1105 +
ChrX	stalkie_big_nohaplotig	CDS	1949003	1949452	.	-	0	Parent=FBgn0010497.2.mrna1;Target=FBgn0010497.2 271 720 +
ChrX	stalkie_big_nohaplotig	CDS	1949537	1949806	.	-	0	Parent=FBgn0010497.2.mrna1;Target=FBgn0010497.2 1 270 +
ChrX	gffcl	locus	1964408	1969566	.	-	.	ID=RLOC_00000089;geneIDs=FBgn0010497.4.path1;transcripts=FBgn0010497.4.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1964408	1969566	.	-	.	ID=FBgn0010497.4.mrna1;geneID=FBgn0010497.4.path1;Name=FBgn0010497.4;Dir=sensecoverage=96.5;identity=100.0;matches=1424;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000089
ChrX	stalkie_big_nohaplotig	exon	1964408	1964578	100	-	.	Parent=FBgn0010497.4.mrna1;Target=FBgn0010497.4 1306 1476 +
ChrX	stalkie_big_nohaplotig	exon	1964645	1964883	100	-	.	Parent=FBgn0010497.4.mrna1;Target=FBgn0010497.4 1067 1305 +
ChrX	stalkie_big_nohaplotig	exon	1964948	1965332	100	-	.	Parent=FBgn0010497.4.mrna1;Target=FBgn0010497.4 682 1066 +
ChrX	stalkie_big_nohaplotig	exon	1965408	1965854	100	-	.	Parent=FBgn0010497.4.mrna1;Target=FBgn0010497.4 235 681 +
ChrX	stalkie_big_nohaplotig	exon	1969385	1969566	100	-	.	Parent=FBgn0010497.4.mrna1;Target=FBgn0010497.4 53 234 +
ChrX	stalkie_big_nohaplotig	CDS	1964408	1964578	.	-	0	Parent=FBgn0010497.4.mrna1;Target=FBgn0010497.4 1306 1476 +
ChrX	stalkie_big_nohaplotig	CDS	1964645	1964883	.	-	2	Parent=FBgn0010497.4.mrna1;Target=FBgn0010497.4 1067 1305 +
ChrX	stalkie_big_nohaplotig	CDS	1964948	1965332	.	-	0	Parent=FBgn0010497.4.mrna1;Target=FBgn0010497.4 682 1066 +
ChrX	stalkie_big_nohaplotig	CDS	1965408	1965854	.	-	0	Parent=FBgn0010497.4.mrna1;Target=FBgn0010497.4 235 681 +
ChrX	stalkie_big_nohaplotig	CDS	1969385	1969564	.	-	0	Parent=FBgn0010497.4.mrna1;Target=FBgn0010497.4 55 234 +
ChrX	gffcl	locus	1966801	2126074	.	+	.	ID=RLOC_00000090;geneIDs=comp161758_c1_seq1.path1;transcripts=comp161758_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1966801	2126074	.	+	.	ID=comp161758_c1_seq1.mrna1;geneID=comp161758_c1_seq1.path1;Name=comp161758_c1_seq1;Dir=indeterminatecoverage=79.1;identity=95.8;matches=1065;mismatches=20;indels=27;unknowns=0;Target=comp161758_c1_seq1 103 2 .;locus=RLOC_00000090
ChrX	stalkie_big_nohaplotig	exon	1966801	1967696	100	+	.	Parent=comp161758_c1_seq1.mrna1;Target=comp161758_c1_seq1 896 1 .
ChrX	stalkie_big_nohaplotig	exon	1997120	1997129	80	+	.	Parent=comp161758_c1_seq1.mrna1;Target=comp161758_c1_seq1 906 897 .
ChrX	stalkie_big_nohaplotig	exon	2004786	2004792	100	+	.	Parent=comp161758_c1_seq1.mrna1;Target=comp161758_c1_seq1 913 907 .
ChrX	stalkie_big_nohaplotig	exon	2015808	2015813	100	+	.	Parent=comp161758_c1_seq1.mrna1;Target=comp161758_c1_seq1 919 914 .
ChrX	stalkie_big_nohaplotig	exon	2032141	2032146	100	+	.	Parent=comp161758_c1_seq1.mrna1;Target=comp161758_c1_seq1 925 920 .
ChrX	stalkie_big_nohaplotig	exon	2037814	2037825	83	+	.	Parent=comp161758_c1_seq1.mrna1;Target=comp161758_c1_seq1 936 926 .
ChrX	stalkie_big_nohaplotig	exon	2044480	2044481	100	+	.	Parent=comp161758_c1_seq1.mrna1;Target=comp161758_c1_seq1 938 937 .
ChrX	stalkie_big_nohaplotig	exon	2053839	2053846	100	+	.	Parent=comp161758_c1_seq1.mrna1;Target=comp161758_c1_seq1 946 939 .
ChrX	stalkie_big_nohaplotig	exon	2055461	2055476	75	+	.	Parent=comp161758_c1_seq1.mrna1;Target=comp161758_c1_seq1 962 947 .
ChrX	stalkie_big_nohaplotig	exon	2058441	2058458	48	+	.	Parent=comp161758_c1_seq1.mrna1;Target=comp161758_c1_seq1 995 963 .
ChrX	stalkie_big_nohaplotig	exon	2076681	2076686	100	+	.	Parent=comp161758_c1_seq1.mrna1;Target=comp161758_c1_seq1 1001 996 .
ChrX	stalkie_big_nohaplotig	exon	2078010	2078015	100	+	.	Parent=comp161758_c1_seq1.mrna1;Target=comp161758_c1_seq1 1007 1002 .
ChrX	stalkie_big_nohaplotig	exon	2079316	2079319	100	+	.	Parent=comp161758_c1_seq1.mrna1;Target=comp161758_c1_seq1 1011 1008 .
ChrX	stalkie_big_nohaplotig	exon	2079943	2079961	36	+	.	Parent=comp161758_c1_seq1.mrna1;Target=comp161758_c1_seq1 1021 1012 .
ChrX	stalkie_big_nohaplotig	exon	2081001	2081008	100	+	.	Parent=comp161758_c1_seq1.mrna1;Target=comp161758_c1_seq1 1029 1022 .
ChrX	stalkie_big_nohaplotig	exon	2093206	2093215	90	+	.	Parent=comp161758_c1_seq1.mrna1;Target=comp161758_c1_seq1 1039 1030 .
ChrX	stalkie_big_nohaplotig	exon	2102795	2102811	78	+	.	Parent=comp161758_c1_seq1.mrna1;Target=comp161758_c1_seq1 1058 1040 .
ChrX	stalkie_big_nohaplotig	exon	2115436	2115442	85	+	.	Parent=comp161758_c1_seq1.mrna1;Target=comp161758_c1_seq1 1065 1059 .
ChrX	stalkie_big_nohaplotig	exon	2121986	2121994	100	+	.	Parent=comp161758_c1_seq1.mrna1;Target=comp161758_c1_seq1 1124 1116 .
ChrX	stalkie_big_nohaplotig	exon	2122117	2122128	91	+	.	Parent=comp161758_c1_seq1.mrna1;Target=comp161758_c1_seq1 1152 1141 .
ChrX	stalkie_big_nohaplotig	exon	2126061	2126074	78	+	.	Parent=comp161758_c1_seq1.mrna1;Target=comp161758_c1_seq1 1166 1153 .
ChrX	stalkie_big_nohaplotig	CDS	1966802	1966903	.	+	0	Parent=comp161758_c1_seq1.mrna1
ChrX	gffcl	locus	1967768	1969276	.	+	.	ID=RLOC_00000091;geneIDs=comp137799_c0_seq1.path1;transcripts=comp137799_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1967768	1969276	.	+	.	ID=comp137799_c0_seq1.mrna1;geneID=comp137799_c0_seq1.path1;Name=comp137799_c0_seq1;Dir=indeterminatecoverage=95.0;identity=99.9;matches=1508;mismatches=1;indels=0;unknowns=0;Target=comp137799_c0_seq1 1589 81 .;CDS_Target=comp137799_c0_seq1 838 704 .;locus=RLOC_00000091
ChrX	stalkie_big_nohaplotig	exon	1967768	1969276	99	+	.	Parent=comp137799_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1968391	1968525	.	+	0	Parent=comp137799_c0_seq1.mrna1
ChrX	gffcl	locus	1982893	1982968	.	-	.	ID=RLOC_00000092;geneIDs=comp159514_c3_seq1.path2;transcripts=comp159514_c3_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	1982893	1982968	.	-	.	ID=comp159514_c3_seq1.mrna2;geneID=comp159514_c3_seq1.path2;Name=comp159514_c3_seq1;Dir=indeterminatecoverage=4.8;identity=89.5;matches=68;mismatches=8;indels=0;unknowns=0;Target=comp159514_c3_seq1 1588 1513 .;locus=RLOC_00000092
ChrX	stalkie_big_nohaplotig	exon	1982893	1982968	89	-	.	Parent=comp159514_c3_seq1.mrna2
ChrX	gffcl	locus	1992063	1992691	.	-	.	ID=RLOC_00000093;geneIDs=comp179455_c0_seq1.path1;transcripts=comp179455_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	1992063	1992691	.	-	.	ID=comp179455_c0_seq1.mrna1;geneID=comp179455_c0_seq1.path1;Name=comp179455_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=629;mismatches=0;indels=0;unknowns=0;Target=comp179455_c0_seq1 629 1 .;CDS_Target=comp179455_c0_seq1 116 3 .;locus=RLOC_00000093
ChrX	stalkie_big_nohaplotig	exon	1992063	1992691	100	-	.	Parent=comp179455_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	1992576	1992689	.	-	0	Parent=comp179455_c0_seq1.mrna1
ChrX	gffcl	locus	2038974	2040068	.	.	.	ID=RLOC_00000095;geneIDs=comp60728_c0_seq1.path1,comp62270_c0_seq1.path1;transcripts=comp60728_c0_seq1.mrna1,comp62270_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2038974	2040068	.	+	.	ID=comp60728_c0_seq1.mrna1;geneID=comp60728_c0_seq1.path1;Name=comp60728_c0_seq1;Dir=sensecoverage=93.0;identity=100.0;matches=548;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000095
ChrX	stalkie_big_nohaplotig	exon	2038974	2039034	100	+	.	Parent=comp60728_c0_seq1.mrna1;Target=comp60728_c0_seq1 1 61 +
ChrX	stalkie_big_nohaplotig	exon	2039323	2039427	100	+	.	Parent=comp60728_c0_seq1.mrna1;Target=comp60728_c0_seq1 62 166 +
ChrX	stalkie_big_nohaplotig	exon	2039625	2039824	100	+	.	Parent=comp60728_c0_seq1.mrna1;Target=comp60728_c0_seq1 167 366 +
ChrX	stalkie_big_nohaplotig	exon	2039887	2040068	100	+	.	Parent=comp60728_c0_seq1.mrna1;Target=comp60728_c0_seq1 367 548 +
ChrX	stalkie_big_nohaplotig	CDS	2039649	2039824	.	+	0	Parent=comp60728_c0_seq1.mrna1;Target=comp60728_c0_seq1 191 366 +
ChrX	stalkie_big_nohaplotig	CDS	2039887	2039950	.	+	1	Parent=comp60728_c0_seq1.mrna1;Target=comp60728_c0_seq1 367 430 +
ChrX	stalkie_big_nohaplotig	mRNA	2039404	2039645	.	-	.	ID=comp62270_c0_seq1.mrna1;geneID=comp62270_c0_seq1.path1;Name=comp62270_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=242;mismatches=0;indels=0;unknowns=0;Target=comp62270_c0_seq1 242 1 .;CDS_Target=comp62270_c0_seq1 132 73 .;locus=RLOC_00000095
ChrX	stalkie_big_nohaplotig	exon	2039404	2039645	100	-	.	Parent=comp62270_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2039514	2039573	.	-	0	Parent=comp62270_c0_seq1.mrna1
ChrX	gffcl	locus	2040045	2048570	.	-	.	ID=RLOC_00000096;geneIDs=FBgn0031700.1.path1,comp153411_c0_seq1.path1;transcripts=comp153411_c0_seq1.mrna1,FBgn0031700.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2040045	2048570	.	-	.	ID=comp153411_c0_seq1.mrna1;geneID=comp153411_c0_seq1.path1;Name=comp153411_c0_seq1;Dir=indeterminatecoverage=97.7;identity=99.9;matches=1770;mismatches=2;indels=0;unknowns=0;Target=comp153411_c0_seq1 960 838 .;locus=RLOC_00000096
ChrX	stalkie_big_nohaplotig	exon	2040045	2041805	99	-	.	Parent=comp153411_c0_seq1.mrna1;Target=comp153411_c0_seq1 1813 53 .
ChrX	stalkie_big_nohaplotig	exon	2042534	2042537	100	-	.	Parent=comp153411_c0_seq1.mrna1;Target=comp153411_c0_seq1 52 49 .
ChrX	stalkie_big_nohaplotig	exon	2048564	2048570	100	-	.	Parent=comp153411_c0_seq1.mrna1;Target=comp153411_c0_seq1 48 42 .
ChrX	stalkie_big_nohaplotig	CDS	2040898	2041020	.	-	0	Parent=comp153411_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2040437	2044860	.	-	.	ID=FBgn0031700.1.mrna1;geneID=FBgn0031700.1.path1;Name=FBgn0031700.1;Dir=sensecoverage=100.0;identity=100.0;matches=354;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000096
ChrX	stalkie_big_nohaplotig	exon	2040437	2040548	100	-	.	Parent=FBgn0031700.1.mrna1;Target=FBgn0031700.1 243 354 +
ChrX	stalkie_big_nohaplotig	exon	2040612	2040738	100	-	.	Parent=FBgn0031700.1.mrna1;Target=FBgn0031700.1 116 242 +
ChrX	stalkie_big_nohaplotig	exon	2044746	2044860	100	-	.	Parent=FBgn0031700.1.mrna1;Target=FBgn0031700.1 1 115 +
ChrX	stalkie_big_nohaplotig	CDS	2040437	2040548	.	-	1	Parent=FBgn0031700.1.mrna1;Target=FBgn0031700.1 243 354 +
ChrX	stalkie_big_nohaplotig	CDS	2040612	2040738	.	-	2	Parent=FBgn0031700.1.mrna1;Target=FBgn0031700.1 116 242 +
ChrX	stalkie_big_nohaplotig	CDS	2044746	2044860	.	-	0	Parent=FBgn0031700.1.mrna1;Target=FBgn0031700.1 1 115 +
ChrX	gffcl	locus	2043372	2043995	.	-	.	ID=RLOC_00000097;geneIDs=comp102276_c0_seq1.path1;transcripts=comp102276_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2043372	2043995	.	-	.	ID=comp102276_c0_seq1.mrna1;geneID=comp102276_c0_seq1.path1;Name=comp102276_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=623;mismatches=1;indels=0;unknowns=0;Target=comp102276_c0_seq1 624 1 .;CDS_Target=comp102276_c0_seq1 301 164 .;locus=RLOC_00000097
ChrX	stalkie_big_nohaplotig	exon	2043372	2043995	99	-	.	Parent=comp102276_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2043695	2043832	.	-	0	Parent=comp102276_c0_seq1.mrna1
ChrX	gffcl	locus	2051371	2054945	.	-	.	ID=RLOC_00000098;geneIDs=FBgn0031702.1.path1;transcripts=FBgn0031702.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2051371	2054945	.	-	.	ID=FBgn0031702.1.mrna1;geneID=FBgn0031702.1.path1;Name=FBgn0031702.1;Dir=sensecoverage=100.0;identity=99.9;matches=1753;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000098
ChrX	stalkie_big_nohaplotig	exon	2051371	2051693	100	-	.	Parent=FBgn0031702.1.mrna1;Target=FBgn0031702.1 1433 1755 +
ChrX	stalkie_big_nohaplotig	exon	2052995	2053178	100	-	.	Parent=FBgn0031702.1.mrna1;Target=FBgn0031702.1 1249 1432 +
ChrX	stalkie_big_nohaplotig	exon	2053581	2053733	100	-	.	Parent=FBgn0031702.1.mrna1;Target=FBgn0031702.1 1096 1248 +
ChrX	stalkie_big_nohaplotig	exon	2053851	2054945	99	-	.	Parent=FBgn0031702.1.mrna1;Target=FBgn0031702.1 1 1095 +
ChrX	stalkie_big_nohaplotig	CDS	2051371	2051693	.	-	2	Parent=FBgn0031702.1.mrna1;Target=FBgn0031702.1 1433 1755 +
ChrX	stalkie_big_nohaplotig	CDS	2052995	2053178	.	-	0	Parent=FBgn0031702.1.mrna1;Target=FBgn0031702.1 1249 1432 +
ChrX	stalkie_big_nohaplotig	CDS	2053581	2053733	.	-	0	Parent=FBgn0031702.1.mrna1;Target=FBgn0031702.1 1096 1248 +
ChrX	stalkie_big_nohaplotig	CDS	2053851	2054945	.	-	0	Parent=FBgn0031702.1.mrna1;Target=FBgn0031702.1 1 1095 +
ChrX	gffcl	locus	2059061	2059612	.	-	.	ID=RLOC_00000099;geneIDs=comp111133_c0_seq1.path1;transcripts=comp111133_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2059061	2059612	.	-	.	ID=comp111133_c0_seq1.mrna1;geneID=comp111133_c0_seq1.path1;Name=comp111133_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=552;mismatches=0;indels=0;unknowns=0;Target=comp111133_c0_seq1 553 2 .;CDS_Target=comp111133_c0_seq1 174 4 .;locus=RLOC_00000099
ChrX	stalkie_big_nohaplotig	exon	2059061	2059612	100	-	.	Parent=comp111133_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2059440	2059610	.	-	0	Parent=comp111133_c0_seq1.mrna1
ChrX	gffcl	locus	2106911	2107387	.	-	.	ID=RLOC_00000100;geneIDs=comp47685_c1_seq1.path1;transcripts=comp47685_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2106911	2107387	.	-	.	ID=comp47685_c1_seq1.mrna1;geneID=comp47685_c1_seq1.path1;Name=comp47685_c1_seq1;Dir=indeterminatecoverage=97.3;identity=100.0;matches=477;mismatches=0;indels=0;unknowns=0;Target=comp47685_c1_seq1 477 1 .;CDS_Target=comp47685_c1_seq1 101 3 .;locus=RLOC_00000100
ChrX	stalkie_big_nohaplotig	exon	2106911	2107387	100	-	.	Parent=comp47685_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2107287	2107385	.	-	0	Parent=comp47685_c1_seq1.mrna1
ChrX	gffcl	locus	2108199	2116267	.	-	.	ID=RLOC_00000101;geneIDs=FBgn0027571.1.path1;transcripts=FBgn0027571.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2108199	2116267	.	-	.	ID=FBgn0027571.1.mrna1;geneID=FBgn0027571.1.path1;Name=FBgn0027571.1;Dir=sensecoverage=100.0;identity=99.9;matches=7448;mismatches=5;indels=0;unknowns=0;locus=RLOC_00000101
ChrX	stalkie_big_nohaplotig	exon	2108199	2108309	100	-	.	Parent=FBgn0027571.1.mrna1;Target=FBgn0027571.1 7345 7455 +
ChrX	stalkie_big_nohaplotig	exon	2108399	2108542	100	-	.	Parent=FBgn0027571.1.mrna1;Target=FBgn0027571.1 7201 7344 +
ChrX	stalkie_big_nohaplotig	exon	2108844	2108939	100	-	.	Parent=FBgn0027571.1.mrna1;Target=FBgn0027571.1 7105 7200 +
ChrX	stalkie_big_nohaplotig	exon	2109007	2111537	100	-	.	Parent=FBgn0027571.1.mrna1;Target=FBgn0027571.1 4574 7104 +
ChrX	stalkie_big_nohaplotig	exon	2111611	2115768	99	-	.	Parent=FBgn0027571.1.mrna1;Target=FBgn0027571.1 416 4573 +
ChrX	stalkie_big_nohaplotig	exon	2115855	2116267	100	-	.	Parent=FBgn0027571.1.mrna1;Target=FBgn0027571.1 3 415 +
ChrX	stalkie_big_nohaplotig	CDS	2108199	2108309	.	-	0	Parent=FBgn0027571.1.mrna1;Target=FBgn0027571.1 7345 7455 +
ChrX	stalkie_big_nohaplotig	CDS	2108399	2108542	.	-	0	Parent=FBgn0027571.1.mrna1;Target=FBgn0027571.1 7201 7344 +
ChrX	stalkie_big_nohaplotig	CDS	2108844	2108939	.	-	0	Parent=FBgn0027571.1.mrna1;Target=FBgn0027571.1 7105 7200 +
ChrX	stalkie_big_nohaplotig	CDS	2109007	2111537	.	-	2	Parent=FBgn0027571.1.mrna1;Target=FBgn0027571.1 4574 7104 +
ChrX	stalkie_big_nohaplotig	CDS	2111611	2115768	.	-	2	Parent=FBgn0027571.1.mrna1;Target=FBgn0027571.1 416 4573 +
ChrX	stalkie_big_nohaplotig	CDS	2115855	2116266	.	-	0	Parent=FBgn0027571.1.mrna1;Target=FBgn0027571.1 4 415 +
ChrX	gffcl	locus	2127244	2128010	.	-	.	ID=RLOC_00000102;geneIDs=comp135177_c0_seq1.path1;transcripts=comp135177_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2127244	2128010	.	-	.	ID=comp135177_c0_seq1.mrna1;geneID=comp135177_c0_seq1.path1;Name=comp135177_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=766;mismatches=1;indels=2;unknowns=0;Target=comp135177_c0_seq1 769 1 .;CDS_Target=comp135177_c0_seq1 694 614 .;locus=RLOC_00000102
ChrX	stalkie_big_nohaplotig	exon	2127244	2128010	99	-	.	Parent=comp135177_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2127318	2127398	.	-	0	Parent=comp135177_c0_seq1.mrna1
ChrX	gffcl	locus	2135867	2139465	.	+	.	ID=RLOC_00000103;geneIDs=comp139925_c0_seq1.path1;transcripts=comp139925_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2135867	2139465	.	+	.	ID=comp139925_c0_seq1.mrna1;geneID=comp139925_c0_seq1.path1;Name=comp139925_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=621;mismatches=0;indels=0;unknowns=0;Target=comp139925_c0_seq1 98 208 .;locus=RLOC_00000103
ChrX	stalkie_big_nohaplotig	exon	2135867	2136152	100	+	.	Parent=comp139925_c0_seq1.mrna1;Target=comp139925_c0_seq1 336 621 -
ChrX	stalkie_big_nohaplotig	exon	2139058	2139137	100	+	.	Parent=comp139925_c0_seq1.mrna1;Target=comp139925_c0_seq1 256 335 -
ChrX	stalkie_big_nohaplotig	exon	2139211	2139465	100	+	.	Parent=comp139925_c0_seq1.mrna1;Target=comp139925_c0_seq1 1 255 -
ChrX	stalkie_big_nohaplotig	CDS	2139258	2139368	.	+	0	Parent=comp139925_c0_seq1.mrna1
ChrX	gffcl	locus	2151605	2153051	.	-	.	ID=RLOC_00000105;geneIDs=FBgn0031500.1.path1;transcripts=FBgn0031500.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2151605	2153051	.	-	.	ID=FBgn0031500.1.mrna1;geneID=FBgn0031500.1.path1;Name=FBgn0031500.1;Dir=sensecoverage=100.0;identity=99.8;matches=1240;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000105
ChrX	stalkie_big_nohaplotig	exon	2151605	2151709	100	-	.	Parent=FBgn0031500.1.mrna1;Target=FBgn0031500.1 1138 1242 +
ChrX	stalkie_big_nohaplotig	exon	2151762	2152367	99	-	.	Parent=FBgn0031500.1.mrna1;Target=FBgn0031500.1 532 1137 +
ChrX	stalkie_big_nohaplotig	exon	2152439	2152650	100	-	.	Parent=FBgn0031500.1.mrna1;Target=FBgn0031500.1 320 531 +
ChrX	stalkie_big_nohaplotig	exon	2152733	2153051	99	-	.	Parent=FBgn0031500.1.mrna1;Target=FBgn0031500.1 1 319 +
ChrX	stalkie_big_nohaplotig	CDS	2151605	2151709	.	-	0	Parent=FBgn0031500.1.mrna1;Target=FBgn0031500.1 1138 1242 +
ChrX	stalkie_big_nohaplotig	CDS	2151762	2152367	.	-	0	Parent=FBgn0031500.1.mrna1;Target=FBgn0031500.1 532 1137 +
ChrX	stalkie_big_nohaplotig	CDS	2152439	2152650	.	-	2	Parent=FBgn0031500.1.mrna1;Target=FBgn0031500.1 320 531 +
ChrX	stalkie_big_nohaplotig	CDS	2152733	2153051	.	-	0	Parent=FBgn0031500.1.mrna1;Target=FBgn0031500.1 1 319 +
ChrX	gffcl	locus	2155481	2156458	.	-	.	ID=RLOC_00000106;geneIDs=comp135728_c0_seq1.path1;transcripts=comp135728_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2155481	2156458	.	-	.	ID=comp135728_c0_seq1.mrna1;geneID=comp135728_c0_seq1.path1;Name=comp135728_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=641;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000106
ChrX	stalkie_big_nohaplotig	exon	2155481	2155886	99	-	.	Parent=comp135728_c0_seq1.mrna1;Target=comp135728_c0_seq1 238 643 +
ChrX	stalkie_big_nohaplotig	exon	2156064	2156134	98	-	.	Parent=comp135728_c0_seq1.mrna1;Target=comp135728_c0_seq1 167 237 +
ChrX	stalkie_big_nohaplotig	exon	2156293	2156458	100	-	.	Parent=comp135728_c0_seq1.mrna1;Target=comp135728_c0_seq1 1 166 +
ChrX	stalkie_big_nohaplotig	CDS	2155749	2155886	.	-	0	Parent=comp135728_c0_seq1.mrna1;Target=comp135728_c0_seq1 238 375 +
ChrX	stalkie_big_nohaplotig	CDS	2156064	2156108	.	-	0	Parent=comp135728_c0_seq1.mrna1;Target=comp135728_c0_seq1 193 237 +
ChrX	gffcl	locus	2169343	2176500	.	+	.	ID=RLOC_00000108;geneIDs=comp79477_c0_seq1.path1;transcripts=comp79477_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2169343	2176500	.	+	.	ID=comp79477_c0_seq1.mrna1;geneID=comp79477_c0_seq1.path1;Name=comp79477_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=213;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000108
ChrX	stalkie_big_nohaplotig	exon	2169343	2169380	97	+	.	Parent=comp79477_c0_seq1.mrna1;Target=comp79477_c0_seq1 1 38 +
ChrX	stalkie_big_nohaplotig	exon	2176325	2176500	100	+	.	Parent=comp79477_c0_seq1.mrna1;Target=comp79477_c0_seq1 39 214 +
ChrX	stalkie_big_nohaplotig	CDS	2169343	2169380	.	+	0	Parent=comp79477_c0_seq1.mrna1;Target=comp79477_c0_seq1 1 38 +
ChrX	stalkie_big_nohaplotig	CDS	2176325	2176469	.	+	1	Parent=comp79477_c0_seq1.mrna1;Target=comp79477_c0_seq1 39 183 +
ChrX	gffcl	locus	2170718	2170986	.	-	.	ID=RLOC_00000109;geneIDs=comp115475_c1_seq1.path1;transcripts=comp115475_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2170718	2170986	.	-	.	ID=comp115475_c1_seq1.mrna1;geneID=comp115475_c1_seq1.path1;Name=comp115475_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=269;mismatches=0;indels=0;unknowns=0;Target=comp115475_c1_seq1 269 1 .;CDS_Target=comp115475_c1_seq1 95 3 .;locus=RLOC_00000109
ChrX	stalkie_big_nohaplotig	exon	2170718	2170986	100	-	.	Parent=comp115475_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2170892	2170984	.	-	0	Parent=comp115475_c1_seq1.mrna1
ChrX	gffcl	locus	2181382	2190202	.	-	.	ID=RLOC_00000110;geneIDs=FBgn0032699.1.path1;transcripts=FBgn0032699.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2181382	2190202	.	-	.	ID=FBgn0032699.1.mrna1;geneID=FBgn0032699.1.path1;Name=FBgn0032699.1;Dir=sensecoverage=100.0;identity=99.9;matches=2506;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000110
ChrX	stalkie_big_nohaplotig	exon	2181382	2182201	100	-	.	Parent=FBgn0032699.1.mrna1;Target=FBgn0032699.1 1689 2508 +
ChrX	stalkie_big_nohaplotig	exon	2183099	2183369	100	-	.	Parent=FBgn0032699.1.mrna1;Target=FBgn0032699.1 1418 1688 +
ChrX	stalkie_big_nohaplotig	exon	2183441	2184176	100	-	.	Parent=FBgn0032699.1.mrna1;Target=FBgn0032699.1 682 1417 +
ChrX	stalkie_big_nohaplotig	exon	2184246	2184623	100	-	.	Parent=FBgn0032699.1.mrna1;Target=FBgn0032699.1 304 681 +
ChrX	stalkie_big_nohaplotig	exon	2184691	2184859	100	-	.	Parent=FBgn0032699.1.mrna1;Target=FBgn0032699.1 135 303 +
ChrX	stalkie_big_nohaplotig	exon	2190069	2190202	98	-	.	Parent=FBgn0032699.1.mrna1;Target=FBgn0032699.1 1 134 +
ChrX	stalkie_big_nohaplotig	CDS	2181382	2182201	.	-	1	Parent=FBgn0032699.1.mrna1;Target=FBgn0032699.1 1689 2508 +
ChrX	stalkie_big_nohaplotig	CDS	2183099	2183369	.	-	2	Parent=FBgn0032699.1.mrna1;Target=FBgn0032699.1 1418 1688 +
ChrX	stalkie_big_nohaplotig	CDS	2183441	2184176	.	-	0	Parent=FBgn0032699.1.mrna1;Target=FBgn0032699.1 682 1417 +
ChrX	stalkie_big_nohaplotig	CDS	2184246	2184623	.	-	0	Parent=FBgn0032699.1.mrna1;Target=FBgn0032699.1 304 681 +
ChrX	stalkie_big_nohaplotig	CDS	2184691	2184859	.	-	1	Parent=FBgn0032699.1.mrna1;Target=FBgn0032699.1 135 303 +
ChrX	stalkie_big_nohaplotig	CDS	2190069	2190202	.	-	0	Parent=FBgn0032699.1.mrna1;Target=FBgn0032699.1 1 134 +
ChrX	gffcl	locus	2193543	2195119	.	+	.	ID=RLOC_00000111;geneIDs=FBgn0032476.1.path1;transcripts=FBgn0032476.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2193543	2195119	.	+	.	ID=FBgn0032476.1.mrna1;geneID=FBgn0032476.1.path1;Name=FBgn0032476.1;Dir=sensecoverage=100.0;identity=100.0;matches=1512;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000111
ChrX	stalkie_big_nohaplotig	exon	2193543	2193858	100	+	.	Parent=FBgn0032476.1.mrna1;Target=FBgn0032476.1 1 316 +
ChrX	stalkie_big_nohaplotig	exon	2193924	2195119	100	+	.	Parent=FBgn0032476.1.mrna1;Target=FBgn0032476.1 317 1512 +
ChrX	stalkie_big_nohaplotig	CDS	2193543	2193858	.	+	0	Parent=FBgn0032476.1.mrna1;Target=FBgn0032476.1 1 316 +
ChrX	stalkie_big_nohaplotig	CDS	2193924	2195119	.	+	2	Parent=FBgn0032476.1.mrna1;Target=FBgn0032476.1 317 1512 +
ChrX	gffcl	locus	2204058	2347501	.	-	.	ID=RLOC_00000112;geneIDs=comp306995_c0_seq1.path1;transcripts=comp306995_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2204058	2347501	.	-	.	ID=comp306995_c0_seq1.mrna1;geneID=comp306995_c0_seq1.path1;Name=comp306995_c0_seq1;Dir=indeterminatecoverage=84.6;identity=98.3;matches=232;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000112
ChrX	stalkie_big_nohaplotig	exon	2204058	2204247	100	-	.	Parent=comp306995_c0_seq1.mrna1;Target=comp306995_c0_seq1 268 79 .
ChrX	stalkie_big_nohaplotig	exon	2215075	2215078	100	-	.	Parent=comp306995_c0_seq1.mrna1;Target=comp306995_c0_seq1 78 75 .
ChrX	stalkie_big_nohaplotig	exon	2291597	2291607	63	-	.	Parent=comp306995_c0_seq1.mrna1;Target=comp306995_c0_seq1 74 64 .
ChrX	stalkie_big_nohaplotig	exon	2298795	2298801	100	-	.	Parent=comp306995_c0_seq1.mrna1;Target=comp306995_c0_seq1 63 57 .
ChrX	stalkie_big_nohaplotig	exon	2304966	2304973	100	-	.	Parent=comp306995_c0_seq1.mrna1;Target=comp306995_c0_seq1 56 49 .
ChrX	stalkie_big_nohaplotig	exon	2335351	2335356	100	-	.	Parent=comp306995_c0_seq1.mrna1;Target=comp306995_c0_seq1 48 43 .
ChrX	stalkie_big_nohaplotig	exon	2342901	2342906	100	-	.	Parent=comp306995_c0_seq1.mrna1;Target=comp306995_c0_seq1 42 37 .
ChrX	stalkie_big_nohaplotig	exon	2347498	2347501	100	-	.	Parent=comp306995_c0_seq1.mrna1;Target=comp306995_c0_seq1 36 33 .
ChrX	stalkie_big_nohaplotig	CDS	2204209	2204247	.	-	0	Parent=comp306995_c0_seq1.mrna1;Target=comp306995_c0_seq1 117 79 .
ChrX	stalkie_big_nohaplotig	CDS	2215075	2215078	.	-	1	Parent=comp306995_c0_seq1.mrna1;Target=comp306995_c0_seq1 78 75 .
ChrX	stalkie_big_nohaplotig	CDS	2291597	2291607	.	-	0	Parent=comp306995_c0_seq1.mrna1;Target=comp306995_c0_seq1 74 64 .
ChrX	stalkie_big_nohaplotig	CDS	2298795	2298801	.	-	1	Parent=comp306995_c0_seq1.mrna1;Target=comp306995_c0_seq1 63 57 .
ChrX	stalkie_big_nohaplotig	CDS	2304966	2304973	.	-	0	Parent=comp306995_c0_seq1.mrna1;Target=comp306995_c0_seq1 56 49 .
ChrX	stalkie_big_nohaplotig	CDS	2335351	2335356	.	-	0	Parent=comp306995_c0_seq1.mrna1;Target=comp306995_c0_seq1 48 43 .
ChrX	stalkie_big_nohaplotig	CDS	2342901	2342906	.	-	0	Parent=comp306995_c0_seq1.mrna1;Target=comp306995_c0_seq1 42 37 .
ChrX	stalkie_big_nohaplotig	CDS	2347498	2347500	.	-	0	Parent=comp306995_c0_seq1.mrna1;Target=comp306995_c0_seq1 36 34 .
ChrX	gffcl	locus	2216139	2223043	.	-	.	ID=RLOC_00000113;geneIDs=FBgn0024291.1.path1;transcripts=FBgn0024291.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2216139	2223043	.	-	.	ID=FBgn0024291.1.mrna1;geneID=FBgn0024291.1.path1;Name=FBgn0024291.1;Dir=sensecoverage=100.0;identity=99.9;matches=2976;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000113
ChrX	stalkie_big_nohaplotig	exon	2216139	2217814	99	-	.	Parent=FBgn0024291.1.mrna1;Target=FBgn0024291.1 1304 2979 +
ChrX	stalkie_big_nohaplotig	exon	2221741	2223043	99	-	.	Parent=FBgn0024291.1.mrna1;Target=FBgn0024291.1 1 1303 +
ChrX	stalkie_big_nohaplotig	CDS	2216139	2217814	.	-	2	Parent=FBgn0024291.1.mrna1;Target=FBgn0024291.1 1304 2979 +
ChrX	stalkie_big_nohaplotig	CDS	2221741	2223043	.	-	0	Parent=FBgn0024291.1.mrna1;Target=FBgn0024291.1 1 1303 +
ChrX	gffcl	locus	2226497	2230853	.	+	.	ID=RLOC_00000114;geneIDs=FBgn0032474.1.path1;transcripts=FBgn0032474.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2226497	2230853	.	+	.	ID=FBgn0032474.1.mrna1;geneID=FBgn0032474.1.path1;Name=FBgn0032474.1;Dir=sensecoverage=100.0;identity=100.0;matches=1212;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000114
ChrX	stalkie_big_nohaplotig	exon	2226497	2226583	100	+	.	Parent=FBgn0032474.1.mrna1;Target=FBgn0032474.1 1 87 +
ChrX	stalkie_big_nohaplotig	exon	2228733	2229179	100	+	.	Parent=FBgn0032474.1.mrna1;Target=FBgn0032474.1 88 534 +
ChrX	stalkie_big_nohaplotig	exon	2230176	2230853	100	+	.	Parent=FBgn0032474.1.mrna1;Target=FBgn0032474.1 535 1212 +
ChrX	stalkie_big_nohaplotig	CDS	2226497	2226583	.	+	0	Parent=FBgn0032474.1.mrna1;Target=FBgn0032474.1 1 87 +
ChrX	stalkie_big_nohaplotig	CDS	2228733	2229179	.	+	0	Parent=FBgn0032474.1.mrna1;Target=FBgn0032474.1 88 534 +
ChrX	stalkie_big_nohaplotig	CDS	2230176	2230853	.	+	0	Parent=FBgn0032474.1.mrna1;Target=FBgn0032474.1 535 1212 +
ChrX	gffcl	locus	2235754	2236671	.	+	.	ID=RLOC_00000115;geneIDs=comp151568_c1_seq1.path1;transcripts=comp151568_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2235754	2236671	.	+	.	ID=comp151568_c1_seq1.mrna1;geneID=comp151568_c1_seq1.path1;Name=comp151568_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=917;mismatches=1;indels=0;unknowns=0;Target=comp151568_c1_seq1 918 1 .;CDS_Target=comp151568_c1_seq1 181 2 .;locus=RLOC_00000115
ChrX	stalkie_big_nohaplotig	exon	2235754	2236671	99	+	.	Parent=comp151568_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2235755	2235934	.	+	0	Parent=comp151568_c1_seq1.mrna1
ChrX	gffcl	locus	2244779	2246530	.	+	.	ID=RLOC_00000116;geneIDs=ORF481.path1;transcripts=ORF481.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2244779	2246530	.	+	.	ID=ORF481.mrna1;geneID=ORF481.path1;Name=ORF481;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1751;mismatches=1;indels=0;unknowns=0;Target=ORF481 1752 1 .;locus=RLOC_00000116
ChrX	stalkie_big_nohaplotig	exon	2244779	2246530	99	+	.	Parent=ORF481.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2244779	2246530	.	+	0	Parent=ORF481.mrna1
ChrX	gffcl	locus	2273135	2274066	.	+	.	ID=RLOC_00000117;geneIDs=comp153018_c0_seq1.path1;transcripts=comp153018_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2273135	2274066	.	+	.	ID=comp153018_c0_seq1.mrna1;geneID=comp153018_c0_seq1.path1;Name=comp153018_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.8;matches=930;mismatches=2;indels=0;unknowns=0;Target=comp153018_c0_seq1 936 5 .;CDS_Target=comp153018_c0_seq1 633 118 .;locus=RLOC_00000117
ChrX	stalkie_big_nohaplotig	exon	2273135	2274066	99	+	.	Parent=comp153018_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2273248	2273763	.	+	0	Parent=comp153018_c0_seq1.mrna1
ChrX	gffcl	locus	2285398	2289017	.	+	.	ID=RLOC_00000118;geneIDs=FBgn0015245.3.path1;transcripts=FBgn0015245.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2285398	2289017	.	+	.	ID=FBgn0015245.3.mrna1;geneID=FBgn0015245.3.path1;Name=FBgn0015245.3;Dir=sensecoverage=100.0;identity=100.0;matches=1785;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000118
ChrX	stalkie_big_nohaplotig	exon	2285398	2285418	100	+	.	Parent=FBgn0015245.3.mrna1;Target=FBgn0015245.3 1 21 +
ChrX	stalkie_big_nohaplotig	exon	2287085	2288422	100	+	.	Parent=FBgn0015245.3.mrna1;Target=FBgn0015245.3 22 1359 +
ChrX	stalkie_big_nohaplotig	exon	2288537	2288722	100	+	.	Parent=FBgn0015245.3.mrna1;Target=FBgn0015245.3 1360 1545 +
ChrX	stalkie_big_nohaplotig	exon	2288778	2289017	100	+	.	Parent=FBgn0015245.3.mrna1;Target=FBgn0015245.3 1546 1785 +
ChrX	stalkie_big_nohaplotig	CDS	2285398	2285418	.	+	0	Parent=FBgn0015245.3.mrna1;Target=FBgn0015245.3 1 21 +
ChrX	stalkie_big_nohaplotig	CDS	2287085	2288422	.	+	0	Parent=FBgn0015245.3.mrna1;Target=FBgn0015245.3 22 1359 +
ChrX	stalkie_big_nohaplotig	CDS	2288537	2288722	.	+	0	Parent=FBgn0015245.3.mrna1;Target=FBgn0015245.3 1360 1545 +
ChrX	stalkie_big_nohaplotig	CDS	2288778	2289017	.	+	0	Parent=FBgn0015245.3.mrna1;Target=FBgn0015245.3 1546 1785 +
ChrX	gffcl	locus	2319353	2319914	.	-	.	ID=RLOC_00000119;geneIDs=comp892622_c0_seq1.path1;transcripts=comp892622_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2319353	2319914	.	-	.	ID=comp892622_c0_seq1.mrna1;geneID=comp892622_c0_seq1.path1;Name=comp892622_c0_seq1;Dir=antisensecoverage=99.8;identity=100.0;matches=491;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000119
ChrX	stalkie_big_nohaplotig	exon	2319353	2319731	100	-	.	Parent=comp892622_c0_seq1.mrna1;Target=comp892622_c0_seq1 1 379 -
ChrX	stalkie_big_nohaplotig	exon	2319803	2319914	100	-	.	Parent=comp892622_c0_seq1.mrna1;Target=comp892622_c0_seq1 380 491 -
ChrX	stalkie_big_nohaplotig	CDS	2319416	2319731	.	-	1	Parent=comp892622_c0_seq1.mrna1;Target=comp892622_c0_seq1 64 379 .
ChrX	stalkie_big_nohaplotig	CDS	2319803	2319807	.	-	0	Parent=comp892622_c0_seq1.mrna1;Target=comp892622_c0_seq1 380 384 .
ChrX	gffcl	locus	2326118	2326986	.	-	.	ID=RLOC_00000120;geneIDs=comp56665_c0_seq1.path1;transcripts=comp56665_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2326118	2326986	.	-	.	ID=comp56665_c0_seq1.mrna1;geneID=comp56665_c0_seq1.path1;Name=comp56665_c0_seq1;Dir=sensecoverage=99.8;identity=99.9;matches=797;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000120
ChrX	stalkie_big_nohaplotig	exon	2326118	2326412	99	-	.	Parent=comp56665_c0_seq1.mrna1;Target=comp56665_c0_seq1 505 799 +
ChrX	stalkie_big_nohaplotig	exon	2326484	2326986	100	-	.	Parent=comp56665_c0_seq1.mrna1;Target=comp56665_c0_seq1 2 504 +
ChrX	stalkie_big_nohaplotig	CDS	2326379	2326412	.	-	1	Parent=comp56665_c0_seq1.mrna1;Target=comp56665_c0_seq1 505 538 +
ChrX	stalkie_big_nohaplotig	CDS	2326484	2326782	.	-	0	Parent=comp56665_c0_seq1.mrna1;Target=comp56665_c0_seq1 206 504 +
ChrX	gffcl	locus	2348472	2349275	.	+	.	ID=RLOC_00000121;geneIDs=comp134891_c0_seq1.path1;transcripts=comp134891_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2348472	2349275	.	+	.	ID=comp134891_c0_seq1.mrna1;geneID=comp134891_c0_seq1.path1;Name=comp134891_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.8;matches=802;mismatches=2;indels=0;unknowns=0;Target=comp134891_c0_seq1 804 1 .;CDS_Target=comp134891_c0_seq1 751 107 .;locus=RLOC_00000121
ChrX	stalkie_big_nohaplotig	exon	2348472	2349275	99	+	.	Parent=comp134891_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2348578	2349222	.	+	0	Parent=comp134891_c0_seq1.mrna1
ChrX	gffcl	locus	2351220	2351736	.	-	.	ID=RLOC_00000122;geneIDs=comp128941_c0_seq1.path1;transcripts=comp128941_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2351220	2351736	.	-	.	ID=comp128941_c0_seq1.mrna1;geneID=comp128941_c0_seq1.path1;Name=comp128941_c0_seq1;Dir=indeterminatecoverage=96.3;identity=99.8;matches=516;mismatches=1;indels=0;unknowns=0;Target=comp128941_c0_seq1 518 2 .;CDS_Target=comp128941_c0_seq1 412 140 .;locus=RLOC_00000122
ChrX	stalkie_big_nohaplotig	exon	2351220	2351736	99	-	.	Parent=comp128941_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2351326	2351598	.	-	0	Parent=comp128941_c0_seq1.mrna1
ChrX	gffcl	locus	2371494	2374452	.	+	.	ID=RLOC_00000123;geneIDs=comp146753_c0_seq1.path1;transcripts=comp146753_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2371494	2374452	.	+	.	ID=comp146753_c0_seq1.mrna1;geneID=comp146753_c0_seq1.path1;Name=comp146753_c0_seq1;Dir=indeterminatecoverage=58.3;identity=95.7;matches=291;mismatches=8;indels=5;unknowns=0;Target=comp146753_c0_seq1 245 180 .;locus=RLOC_00000123
ChrX	stalkie_big_nohaplotig	exon	2371494	2371778	98	+	.	Parent=comp146753_c0_seq1.mrna1;Target=comp146753_c0_seq1 285 1 .
ChrX	stalkie_big_nohaplotig	exon	2374435	2374452	57	+	.	Parent=comp146753_c0_seq1.mrna1;Target=comp146753_c0_seq1 313 299 .
ChrX	stalkie_big_nohaplotig	CDS	2371673	2371738	.	+	0	Parent=comp146753_c0_seq1.mrna1
ChrX	gffcl	locus	2375207	2375729	.	-	.	ID=RLOC_00000124;geneIDs=comp115911_c0_seq1.path1;transcripts=comp115911_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2375207	2375729	.	-	.	ID=comp115911_c0_seq1.mrna1;geneID=comp115911_c0_seq1.path1;Name=comp115911_c0_seq1;Dir=sensecoverage=99.8;identity=99.8;matches=446;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000124
ChrX	stalkie_big_nohaplotig	exon	2375207	2375438	100	-	.	Parent=comp115911_c0_seq1.mrna1;Target=comp115911_c0_seq1 216 447 +
ChrX	stalkie_big_nohaplotig	exon	2375515	2375729	99	-	.	Parent=comp115911_c0_seq1.mrna1;Target=comp115911_c0_seq1 1 215 +
ChrX	stalkie_big_nohaplotig	CDS	2375370	2375438	.	-	0	Parent=comp115911_c0_seq1.mrna1;Target=comp115911_c0_seq1 216 284 +
ChrX	stalkie_big_nohaplotig	CDS	2375515	2375622	.	-	0	Parent=comp115911_c0_seq1.mrna1;Target=comp115911_c0_seq1 108 215 +
ChrX	gffcl	locus	2387065	2387567	.	-	.	ID=RLOC_00000125;geneIDs=comp118910_c0_seq1.path1;transcripts=comp118910_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2387065	2387567	.	-	.	ID=comp118910_c0_seq1.mrna1;geneID=comp118910_c0_seq1.path1;Name=comp118910_c0_seq1;Dir=antisensecoverage=99.3;identity=100.0;matches=440;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000125
ChrX	stalkie_big_nohaplotig	exon	2387065	2387261	100	-	.	Parent=comp118910_c0_seq1.mrna1;Target=comp118910_c0_seq1 4 200 -
ChrX	stalkie_big_nohaplotig	exon	2387325	2387567	100	-	.	Parent=comp118910_c0_seq1.mrna1;Target=comp118910_c0_seq1 201 443 -
ChrX	stalkie_big_nohaplotig	CDS	2387193	2387261	.	-	0	Parent=comp118910_c0_seq1.mrna1;Target=comp118910_c0_seq1 132 200 .
ChrX	stalkie_big_nohaplotig	CDS	2387325	2387393	.	-	0	Parent=comp118910_c0_seq1.mrna1;Target=comp118910_c0_seq1 201 269 .
ChrX	gffcl	locus	2392696	2395389	.	-	.	ID=RLOC_00000126;geneIDs=ORF168.path1;transcripts=ORF168.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2392696	2395389	.	-	.	ID=ORF168.mrna1;geneID=ORF168.path1;Name=ORF168;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2691;mismatches=3;indels=0;unknowns=0;Target=ORF168 2694 1 .;locus=RLOC_00000126
ChrX	stalkie_big_nohaplotig	exon	2392696	2395389	99	-	.	Parent=ORF168.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2392696	2395389	.	-	0	Parent=ORF168.mrna1
ChrX	gffcl	locus	2401695	2404157	.	-	.	ID=RLOC_00000127;geneIDs=ORF208.path1;transcripts=ORF208.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2401695	2404157	.	-	.	ID=ORF208.mrna1;geneID=ORF208.path1;Name=ORF208;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2462;mismatches=1;indels=0;unknowns=0;Target=ORF208 2463 1 .;locus=RLOC_00000127
ChrX	stalkie_big_nohaplotig	exon	2401695	2404157	99	-	.	Parent=ORF208.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2401695	2404157	.	-	0	Parent=ORF208.mrna1
ChrX	gffcl	locus	2408867	2411089	.	-	.	ID=RLOC_00000128;geneIDs=ORF259.path1;transcripts=ORF259.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2408867	2411089	.	-	.	ID=ORF259.mrna1;geneID=ORF259.path1;Name=ORF259;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2223;mismatches=0;indels=0;unknowns=0;Target=ORF259 2223 1 .;locus=RLOC_00000128
ChrX	stalkie_big_nohaplotig	exon	2408867	2411089	100	-	.	Parent=ORF259.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2408867	2411089	.	-	0	Parent=ORF259.mrna1
ChrX	gffcl	locus	2432418	2433292	.	-	.	ID=RLOC_00000129;geneIDs=comp143025_c0_seq1.path1;transcripts=comp143025_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2432418	2433292	.	-	.	ID=comp143025_c0_seq1.mrna1;geneID=comp143025_c0_seq1.path1;Name=comp143025_c0_seq1;Dir=sensecoverage=99.9;identity=99.5;matches=775;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000129
ChrX	stalkie_big_nohaplotig	exon	2432418	2433007	99	-	.	Parent=comp143025_c0_seq1.mrna1;Target=comp143025_c0_seq1 190 779 +
ChrX	stalkie_big_nohaplotig	exon	2433104	2433292	99	-	.	Parent=comp143025_c0_seq1.mrna1;Target=comp143025_c0_seq1 1 189 +
ChrX	stalkie_big_nohaplotig	CDS	2432900	2433007	.	-	0	Parent=comp143025_c0_seq1.mrna1;Target=comp143025_c0_seq1 190 297 +
ChrX	stalkie_big_nohaplotig	CDS	2433104	2433166	.	-	0	Parent=comp143025_c0_seq1.mrna1;Target=comp143025_c0_seq1 127 189 +
ChrX	gffcl	locus	2469454	2470019	.	-	.	ID=RLOC_00000130;geneIDs=comp142522_c0_seq1.path1;transcripts=comp142522_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2469454	2470019	.	-	.	ID=comp142522_c0_seq1.mrna1;geneID=comp142522_c0_seq1.path1;Name=comp142522_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.8;matches=565;mismatches=1;indels=0;unknowns=0;Target=comp142522_c0_seq1 566 1 .;CDS_Target=comp142522_c0_seq1 124 2 .;locus=RLOC_00000130
ChrX	stalkie_big_nohaplotig	exon	2469454	2470019	99	-	.	Parent=comp142522_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2469896	2470018	.	-	0	Parent=comp142522_c0_seq1.mrna1
ChrX	gffcl	locus	2532723	3034355	.	+	.	ID=RLOC_00000133;geneIDs=comp160095_c4_seq1.path1;transcripts=comp160095_c4_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2532723	3034355	.	+	.	ID=comp160095_c4_seq1.mrna1;geneID=comp160095_c4_seq1.path1;Name=comp160095_c4_seq1;Dir=antisensecoverage=71.8;identity=94.5;matches=1787;mismatches=69;indels=36;unknowns=0;locus=RLOC_00000133
ChrX	stalkie_big_nohaplotig	exon	2532723	2532990	99	+	.	Parent=comp160095_c4_seq1.mrna1;Target=comp160095_c4_seq1 2385 2652 -
ChrX	stalkie_big_nohaplotig	exon	2545043	2546131	99	+	.	Parent=comp160095_c4_seq1.mrna1;Target=comp160095_c4_seq1 1291 2384 -
ChrX	stalkie_big_nohaplotig	exon	2561113	2561121	100	+	.	Parent=comp160095_c4_seq1.mrna1;Target=comp160095_c4_seq1 1282 1290 -
ChrX	stalkie_big_nohaplotig	exon	2915243	2915273	50	+	.	Parent=comp160095_c4_seq1.mrna1;Target=comp160095_c4_seq1 1250 1281 -
ChrX	stalkie_big_nohaplotig	exon	2917685	2917692	100	+	.	Parent=comp160095_c4_seq1.mrna1;Target=comp160095_c4_seq1 1221 1228 -
ChrX	stalkie_big_nohaplotig	exon	3033881	3034144	84	+	.	Parent=comp160095_c4_seq1.mrna1;Target=comp160095_c4_seq1 946 1220 -
ChrX	stalkie_big_nohaplotig	exon	3034162	3034355	81	+	.	Parent=comp160095_c4_seq1.mrna1;Target=comp160095_c4_seq1 747 945 -
ChrX	stalkie_big_nohaplotig	CDS	3034089	3034144	.	+	0	Parent=comp160095_c4_seq1.mrna1;Target=comp160095_c4_seq1 946 1000 .
ChrX	stalkie_big_nohaplotig	CDS	3034162	3034211	.	+	1	Parent=comp160095_c4_seq1.mrna1;Target=comp160095_c4_seq1 887 945 .
ChrX	gffcl	locus	2572387	2573287	.	-	.	ID=RLOC_00000134;geneIDs=comp134825_c0_seq1.path1;transcripts=comp134825_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2572387	2573287	.	-	.	ID=comp134825_c0_seq1.mrna1;geneID=comp134825_c0_seq1.path1;Name=comp134825_c0_seq1;Dir=sensecoverage=97.7;identity=100.0;matches=849;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000134
ChrX	stalkie_big_nohaplotig	exon	2572387	2572790	100	-	.	Parent=comp134825_c0_seq1.mrna1;Target=comp134825_c0_seq1 452 855 +
ChrX	stalkie_big_nohaplotig	exon	2572843	2573287	100	-	.	Parent=comp134825_c0_seq1.mrna1;Target=comp134825_c0_seq1 7 451 +
ChrX	stalkie_big_nohaplotig	CDS	2572626	2572790	.	-	0	Parent=comp134825_c0_seq1.mrna1;Target=comp134825_c0_seq1 452 616 +
ChrX	stalkie_big_nohaplotig	CDS	2572843	2573184	.	-	0	Parent=comp134825_c0_seq1.mrna1;Target=comp134825_c0_seq1 110 451 +
ChrX	gffcl	locus	2601547	2602288	.	-	.	ID=RLOC_00000135;geneIDs=comp159525_c0_seq1.path1;transcripts=comp159525_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2601547	2602288	.	-	.	ID=comp159525_c0_seq1.mrna1;geneID=comp159525_c0_seq1.path1;Name=comp159525_c0_seq1;Dir=indeterminatecoverage=85.2;identity=93.9;matches=711;mismatches=31;indels=15;unknowns=0;Target=comp159525_c0_seq1 757 1 .;CDS_Target=comp159525_c0_seq1 184 137 .;locus=RLOC_00000135
ChrX	stalkie_big_nohaplotig	exon	2601547	2602288	93	-	.	Parent=comp159525_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2602105	2602152	.	-	0	Parent=comp159525_c0_seq1.mrna1
ChrX	gffcl	locus	2709982	2711014	.	+	.	ID=RLOC_00000136;geneIDs=comp148670_c0_seq1.path1;transcripts=comp148670_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2709982	2711014	.	+	.	ID=comp148670_c0_seq1.mrna1;geneID=comp148670_c0_seq1.path1;Name=comp148670_c0_seq1;Dir=indeterminatecoverage=98.8;identity=95.4;matches=1019;mismatches=14;indels=35;unknowns=0;Target=comp148670_c0_seq1 1077 10 .;CDS_Target=comp148670_c0_seq1 555 10 .;locus=RLOC_00000136
ChrX	stalkie_big_nohaplotig	exon	2709982	2711014	95	+	.	Parent=comp148670_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2709982	2710527	.	+	0	Parent=comp148670_c0_seq1.mrna1
ChrX	gffcl	locus	2711018	2713962	.	+	.	ID=RLOC_00000137;geneIDs=comp148148_c0_seq1.path1;transcripts=comp148148_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2711018	2713962	.	+	.	ID=comp148148_c0_seq1.mrna1;geneID=comp148148_c0_seq1.path1;Name=comp148148_c0_seq1;Dir=antisensecoverage=99.9;identity=98.4;matches=1735;mismatches=17;indels=12;unknowns=0;Target=comp148148_c0_seq1 855 1010 .;locus=RLOC_00000137
ChrX	stalkie_big_nohaplotig	exon	2711018	2711331	99	+	.	Parent=comp148148_c0_seq1.mrna1;Target=comp148148_c0_seq1 1449 1762 -
ChrX	stalkie_big_nohaplotig	exon	2712522	2713962	98	+	.	Parent=comp148148_c0_seq1.mrna1;Target=comp148148_c0_seq1 2 1448 -
ChrX	stalkie_big_nohaplotig	CDS	2712962	2713117	.	+	0	Parent=comp148148_c0_seq1.mrna1
ChrX	gffcl	locus	2751758	2752290	.	-	.	ID=RLOC_00000138;geneIDs=comp110081_c0_seq1.path1;transcripts=comp110081_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2751758	2752290	.	-	.	ID=comp110081_c0_seq1.mrna1;geneID=comp110081_c0_seq1.path1;Name=comp110081_c0_seq1;Dir=indeterminatecoverage=98.0;identity=100.0;matches=533;mismatches=0;indels=0;unknowns=0;Target=comp110081_c0_seq1 534 2 .;CDS_Target=comp110081_c0_seq1 407 69 .;locus=RLOC_00000138
ChrX	stalkie_big_nohaplotig	exon	2751758	2752290	100	-	.	Parent=comp110081_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2751885	2752223	.	-	0	Parent=comp110081_c0_seq1.mrna1
ChrX	gffcl	locus	2805955	2806872	.	+	.	ID=RLOC_00000139;geneIDs=comp117994_c0_seq1.path1;transcripts=comp117994_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2805955	2806872	.	+	.	ID=comp117994_c0_seq1.mrna1;geneID=comp117994_c0_seq1.path1;Name=comp117994_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=916;mismatches=2;indels=0;unknowns=0;Target=comp117994_c0_seq1 918 1 .;CDS_Target=comp117994_c0_seq1 557 387 .;locus=RLOC_00000139
ChrX	stalkie_big_nohaplotig	exon	2805955	2806872	99	+	.	Parent=comp117994_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2806341	2806511	.	+	0	Parent=comp117994_c0_seq1.mrna1
ChrX	gffcl	locus	2807097	2807821	.	+	.	ID=RLOC_00000140;geneIDs=comp116617_c0_seq1.path1;transcripts=comp116617_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2807097	2807821	.	+	.	ID=comp116617_c0_seq1.mrna1;geneID=comp116617_c0_seq1.path1;Name=comp116617_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=651;mismatches=2;indels=1;unknowns=0;Target=comp116617_c0_seq1 152 340 .;locus=RLOC_00000140
ChrX	stalkie_big_nohaplotig	exon	2807097	2807639	99	+	.	Parent=comp116617_c0_seq1.mrna1;Target=comp116617_c0_seq1 111 654 -
ChrX	stalkie_big_nohaplotig	exon	2807712	2807821	99	+	.	Parent=comp116617_c0_seq1.mrna1;Target=comp116617_c0_seq1 1 110 -
ChrX	stalkie_big_nohaplotig	CDS	2807411	2807598	.	+	0	Parent=comp116617_c0_seq1.mrna1
ChrX	gffcl	locus	2813524	2814318	.	+	.	ID=RLOC_00000141;geneIDs=comp150186_c0_seq1.path1;transcripts=comp150186_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2813524	2814318	.	+	.	ID=comp150186_c0_seq1.mrna1;geneID=comp150186_c0_seq1.path1;Name=comp150186_c0_seq1;Dir=indeterminatecoverage=96.1;identity=99.7;matches=794;mismatches=1;indels=1;unknowns=0;Target=comp150186_c0_seq1 796 1 .;CDS_Target=comp150186_c0_seq1 424 326 .;locus=RLOC_00000141
ChrX	stalkie_big_nohaplotig	exon	2813524	2814318	99	+	.	Parent=comp150186_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2813849	2813946	.	+	0	Parent=comp150186_c0_seq1.mrna1
ChrX	gffcl	locus	2815110	2815579	.	-	.	ID=RLOC_00000142;geneIDs=comp115928_c1_seq1.path1;transcripts=comp115928_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2815110	2815579	.	-	.	ID=comp115928_c1_seq1.mrna1;geneID=comp115928_c1_seq1.path1;Name=comp115928_c1_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=470;mismatches=0;indels=0;unknowns=0;Target=comp115928_c1_seq1 470 1 .;CDS_Target=comp115928_c1_seq1 433 341 .;locus=RLOC_00000142
ChrX	stalkie_big_nohaplotig	exon	2815110	2815579	100	-	.	Parent=comp115928_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2815147	2815239	.	-	0	Parent=comp115928_c1_seq1.mrna1
ChrX	gffcl	locus	2815634	2816494	.	-	.	ID=RLOC_00000143;geneIDs=comp144230_c0_seq1.path1;transcripts=comp144230_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2815634	2816494	.	-	.	ID=comp144230_c0_seq1.mrna1;geneID=comp144230_c0_seq1.path1;Name=comp144230_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=857;mismatches=4;indels=2;unknowns=0;Target=comp144230_c0_seq1 863 1 .;CDS_Target=comp144230_c0_seq1 434 342 .;locus=RLOC_00000143
ChrX	stalkie_big_nohaplotig	exon	2815634	2816494	99	-	.	Parent=comp144230_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2816063	2816155	.	-	0	Parent=comp144230_c0_seq1.mrna1
ChrX	gffcl	locus	2855836	2856523	.	+	.	ID=RLOC_00000144;geneIDs=comp20973_c0_seq1.path1;transcripts=comp20973_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2855836	2856523	.	+	.	ID=comp20973_c0_seq1.mrna1;geneID=comp20973_c0_seq1.path1;Name=comp20973_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=686;mismatches=2;indels=0;unknowns=0;Target=comp20973_c0_seq1 688 1 .;CDS_Target=comp20973_c0_seq1 477 421 .;locus=RLOC_00000144
ChrX	stalkie_big_nohaplotig	exon	2855836	2856523	99	+	.	Parent=comp20973_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2856256	2856312	.	+	0	Parent=comp20973_c0_seq1.mrna1
ChrX	gffcl	locus	2856680	2857233	.	+	.	ID=RLOC_00000145;geneIDs=comp82893_c0_seq1.path1;transcripts=comp82893_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2856680	2857233	.	+	.	ID=comp82893_c0_seq1.mrna1;geneID=comp82893_c0_seq1.path1;Name=comp82893_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=551;mismatches=1;indels=2;unknowns=0;Target=comp82893_c0_seq1 552 1 .;CDS_Target=comp82893_c0_seq1 247 137 .;locus=RLOC_00000145
ChrX	stalkie_big_nohaplotig	exon	2856680	2857233	99	+	.	Parent=comp82893_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2856818	2856928	.	+	0	Parent=comp82893_c0_seq1.mrna1
ChrX	gffcl	locus	2908341	2917626	.	+	.	ID=RLOC_00000146;geneIDs=FBgn0262160.1.path1,comp161232_c1_seq1.path1;transcripts=comp161232_c1_seq1.mrna1,FBgn0262160.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2908341	2913267	.	+	.	ID=comp161232_c1_seq1.mrna1;geneID=comp161232_c1_seq1.path1;Name=comp161232_c1_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=4012;mismatches=13;indels=0;unknowns=0;locus=RLOC_00000146
ChrX	stalkie_big_nohaplotig	exon	2908341	2908791	98	+	.	Parent=comp161232_c1_seq1.mrna1;Target=comp161232_c1_seq1 3575 4025 -
ChrX	stalkie_big_nohaplotig	exon	2908847	2909919	99	+	.	Parent=comp161232_c1_seq1.mrna1;Target=comp161232_c1_seq1 2502 3574 -
ChrX	stalkie_big_nohaplotig	exon	2910326	2911142	99	+	.	Parent=comp161232_c1_seq1.mrna1;Target=comp161232_c1_seq1 1685 2501 -
ChrX	stalkie_big_nohaplotig	exon	2911337	2912109	99	+	.	Parent=comp161232_c1_seq1.mrna1;Target=comp161232_c1_seq1 912 1684 -
ChrX	stalkie_big_nohaplotig	exon	2912269	2913005	100	+	.	Parent=comp161232_c1_seq1.mrna1;Target=comp161232_c1_seq1 175 911 -
ChrX	stalkie_big_nohaplotig	exon	2913094	2913267	100	+	.	Parent=comp161232_c1_seq1.mrna1;Target=comp161232_c1_seq1 1 174 -
ChrX	stalkie_big_nohaplotig	CDS	2908342	2908791	.	+	0	Parent=comp161232_c1_seq1.mrna1;Target=comp161232_c1_seq1 3575 4024 .
ChrX	stalkie_big_nohaplotig	CDS	2908847	2909919	.	+	0	Parent=comp161232_c1_seq1.mrna1;Target=comp161232_c1_seq1 2502 3574 .
ChrX	stalkie_big_nohaplotig	CDS	2910326	2911142	.	+	1	Parent=comp161232_c1_seq1.mrna1;Target=comp161232_c1_seq1 1685 2501 .
ChrX	stalkie_big_nohaplotig	CDS	2911337	2912109	.	+	0	Parent=comp161232_c1_seq1.mrna1;Target=comp161232_c1_seq1 912 1684 .
ChrX	stalkie_big_nohaplotig	CDS	2912269	2913005	.	+	1	Parent=comp161232_c1_seq1.mrna1;Target=comp161232_c1_seq1 175 911 .
ChrX	stalkie_big_nohaplotig	CDS	2913094	2913266	.	+	2	Parent=comp161232_c1_seq1.mrna1;Target=comp161232_c1_seq1 2 174 .
ChrX	stalkie_big_nohaplotig	mRNA	2908342	2917626	.	+	.	ID=FBgn0262160.1.mrna1;geneID=FBgn0262160.1.path1;Name=FBgn0262160.1;Dir=sensecoverage=100.0;identity=99.7;matches=3722;mismatches=13;indels=0;unknowns=0;locus=RLOC_00000146
ChrX	stalkie_big_nohaplotig	exon	2908342	2908791	98	+	.	Parent=FBgn0262160.1.mrna1;Target=FBgn0262160.1 1 450 +
ChrX	stalkie_big_nohaplotig	exon	2908847	2909919	99	+	.	Parent=FBgn0262160.1.mrna1;Target=FBgn0262160.1 451 1523 +
ChrX	stalkie_big_nohaplotig	exon	2910326	2911142	99	+	.	Parent=FBgn0262160.1.mrna1;Target=FBgn0262160.1 1524 2340 +
ChrX	stalkie_big_nohaplotig	exon	2911337	2912109	99	+	.	Parent=FBgn0262160.1.mrna1;Target=FBgn0262160.1 2341 3113 +
ChrX	stalkie_big_nohaplotig	exon	2912269	2912689	100	+	.	Parent=FBgn0262160.1.mrna1;Target=FBgn0262160.1 3114 3534 +
ChrX	stalkie_big_nohaplotig	exon	2917426	2917626	100	+	.	Parent=FBgn0262160.1.mrna1;Target=FBgn0262160.1 3535 3735 +
ChrX	stalkie_big_nohaplotig	CDS	2908342	2908791	.	+	0	Parent=FBgn0262160.1.mrna1;Target=FBgn0262160.1 1 450 +
ChrX	stalkie_big_nohaplotig	CDS	2908847	2909919	.	+	0	Parent=FBgn0262160.1.mrna1;Target=FBgn0262160.1 451 1523 +
ChrX	stalkie_big_nohaplotig	CDS	2910326	2911142	.	+	1	Parent=FBgn0262160.1.mrna1;Target=FBgn0262160.1 1524 2340 +
ChrX	stalkie_big_nohaplotig	CDS	2911337	2912109	.	+	0	Parent=FBgn0262160.1.mrna1;Target=FBgn0262160.1 2341 3113 +
ChrX	stalkie_big_nohaplotig	CDS	2912269	2912689	.	+	1	Parent=FBgn0262160.1.mrna1;Target=FBgn0262160.1 3114 3534 +
ChrX	stalkie_big_nohaplotig	CDS	2917426	2917626	.	+	0	Parent=FBgn0262160.1.mrna1;Target=FBgn0262160.1 3535 3735 +
ChrX	gffcl	locus	2925601	2925964	.	-	.	ID=RLOC_00000147;geneIDs=comp151709_c0_seq1.path1;transcripts=comp151709_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2925601	2925964	.	-	.	ID=comp151709_c0_seq1.mrna1;geneID=comp151709_c0_seq1.path1;Name=comp151709_c0_seq1;Dir=indeterminatecoverage=71.4;identity=93.0;matches=348;mismatches=4;indels=22;unknowns=0;Target=comp151709_c0_seq1 362 1 .;CDS_Target=comp151709_c0_seq1 263 210 .;locus=RLOC_00000147
ChrX	stalkie_big_nohaplotig	exon	2925601	2925964	93	-	.	Parent=comp151709_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2925700	2925743	.	-	0	Parent=comp151709_c0_seq1.mrna1
ChrX	gffcl	locus	2927164	2927644	.	+	.	ID=RLOC_00000148;geneIDs=comp346465_c0_seq1.path1;transcripts=comp346465_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2927164	2927644	.	+	.	ID=comp346465_c0_seq1.mrna1;geneID=comp346465_c0_seq1.path1;Name=comp346465_c0_seq1;Dir=indeterminatecoverage=99.0;identity=100.0;matches=481;mismatches=0;indels=0;unknowns=0;Target=comp346465_c0_seq1 486 6 .;CDS_Target=comp346465_c0_seq1 334 263 .;locus=RLOC_00000148
ChrX	stalkie_big_nohaplotig	exon	2927164	2927644	100	+	.	Parent=comp346465_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2927421	2927492	.	+	0	Parent=comp346465_c0_seq1.mrna1
ChrX	gffcl	locus	2929605	2930114	.	-	.	ID=RLOC_00000149;geneIDs=comp149437_c0_seq1.path1;transcripts=comp149437_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2929605	2930114	.	-	.	ID=comp149437_c0_seq1.mrna1;geneID=comp149437_c0_seq1.path1;Name=comp149437_c0_seq1;Dir=indeterminatecoverage=99.0;identity=92.2;matches=470;mismatches=8;indels=32;unknowns=0;Target=comp149437_c0_seq1 483 6 .;CDS_Target=comp149437_c0_seq1 358 197 .;locus=RLOC_00000149
ChrX	stalkie_big_nohaplotig	exon	2929605	2930114	92	-	.	Parent=comp149437_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2929762	2929923	.	-	0	Parent=comp149437_c0_seq1.mrna1
ChrX	gffcl	locus	2935746	2941087	.	+	.	ID=RLOC_00000150;geneIDs=FBgn0040262.1.path1;transcripts=FBgn0040262.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2935746	2941087	.	+	.	ID=FBgn0040262.1.mrna1;geneID=FBgn0040262.1.path1;Name=FBgn0040262.1;Dir=sensecoverage=100.0;identity=99.9;matches=1652;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000150
ChrX	stalkie_big_nohaplotig	exon	2935746	2936461	100	+	.	Parent=FBgn0040262.1.mrna1;Target=FBgn0040262.1 1 716 +
ChrX	stalkie_big_nohaplotig	exon	2936529	2936697	100	+	.	Parent=FBgn0040262.1.mrna1;Target=FBgn0040262.1 717 885 +
ChrX	stalkie_big_nohaplotig	exon	2940320	2941087	99	+	.	Parent=FBgn0040262.1.mrna1;Target=FBgn0040262.1 886 1653 +
ChrX	stalkie_big_nohaplotig	CDS	2935746	2936461	.	+	0	Parent=FBgn0040262.1.mrna1;Target=FBgn0040262.1 1 716 +
ChrX	stalkie_big_nohaplotig	CDS	2936529	2936697	.	+	1	Parent=FBgn0040262.1.mrna1;Target=FBgn0040262.1 717 885 +
ChrX	stalkie_big_nohaplotig	CDS	2940320	2941087	.	+	0	Parent=FBgn0040262.1.mrna1;Target=FBgn0040262.1 886 1653 +
ChrX	gffcl	locus	2943367	2951335	.	-	.	ID=RLOC_00000151;geneIDs=FBgn0031405.1.path1;transcripts=FBgn0031405.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2943367	2951335	.	-	.	ID=FBgn0031405.1.mrna1;geneID=FBgn0031405.1.path1;Name=FBgn0031405.1;Dir=sensecoverage=100.0;identity=99.7;matches=1283;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000151
ChrX	stalkie_big_nohaplotig	exon	2943367	2944231	99	-	.	Parent=FBgn0031405.1.mrna1;Target=FBgn0031405.1 423 1287 +
ChrX	stalkie_big_nohaplotig	exon	2946753	2947020	100	-	.	Parent=FBgn0031405.1.mrna1;Target=FBgn0031405.1 155 422 +
ChrX	stalkie_big_nohaplotig	exon	2951182	2951335	100	-	.	Parent=FBgn0031405.1.mrna1;Target=FBgn0031405.1 1 154 +
ChrX	stalkie_big_nohaplotig	CDS	2943367	2944231	.	-	1	Parent=FBgn0031405.1.mrna1;Target=FBgn0031405.1 423 1287 +
ChrX	stalkie_big_nohaplotig	CDS	2946753	2947020	.	-	2	Parent=FBgn0031405.1.mrna1;Target=FBgn0031405.1 155 422 +
ChrX	stalkie_big_nohaplotig	CDS	2951182	2951335	.	-	0	Parent=FBgn0031405.1.mrna1;Target=FBgn0031405.1 1 154 +
ChrX	gffcl	locus	2947556	2948564	.	-	.	ID=RLOC_00000152;geneIDs=comp148747_c0_seq1.path1;transcripts=comp148747_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2947556	2948564	.	-	.	ID=comp148747_c0_seq1.mrna1;geneID=comp148747_c0_seq1.path1;Name=comp148747_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.6;matches=1005;mismatches=4;indels=0;unknowns=0;Target=comp148747_c0_seq1 1016 8 .;CDS_Target=comp148747_c0_seq1 853 164 .;locus=RLOC_00000152
ChrX	stalkie_big_nohaplotig	exon	2947556	2948564	99	-	.	Parent=comp148747_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2947719	2948408	.	-	0	Parent=comp148747_c0_seq1.mrna1
ChrX	gffcl	locus	2949769	2950287	.	+	.	ID=RLOC_00000153;geneIDs=comp149259_c0_seq1.path1;transcripts=comp149259_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2949769	2950287	.	+	.	ID=comp149259_c0_seq1.mrna1;geneID=comp149259_c0_seq1.path1;Name=comp149259_c0_seq1;Dir=indeterminatecoverage=99.4;identity=100.0;matches=519;mismatches=0;indels=0;unknowns=0;Target=comp149259_c0_seq1 519 1 .;CDS_Target=comp149259_c0_seq1 370 272 .;locus=RLOC_00000153
ChrX	stalkie_big_nohaplotig	exon	2949769	2950287	100	+	.	Parent=comp149259_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2950040	2950138	.	+	0	Parent=comp149259_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2963687	2975443	.	-	.	ID=comp157462_c0_seq1.mrna1;geneID=comp157462_c0_seq1.path1;Name=comp157462_c0_seq1;Dir=indeterminatecoverage=38.6;identity=75.9;matches=223;mismatches=59;indels=12;unknowns=0;Target=comp157462_c0_seq1 624 601 .;locus=RLOC_00000154
ChrX	stalkie_big_nohaplotig	exon	2963687	2963919	77	-	.	Parent=comp157462_c0_seq1.mrna1;Target=comp157462_c0_seq1 768 536 .
ChrX	stalkie_big_nohaplotig	exon	2972059	2972067	100	-	.	Parent=comp157462_c0_seq1.mrna1;Target=comp157462_c0_seq1 535 527 .
ChrX	stalkie_big_nohaplotig	exon	2973105	2973111	100	-	.	Parent=comp157462_c0_seq1.mrna1;Target=comp157462_c0_seq1 526 520 .
ChrX	stalkie_big_nohaplotig	exon	2975411	2975443	60	-	.	Parent=comp157462_c0_seq1.mrna1;Target=comp157462_c0_seq1 516 472 .
ChrX	stalkie_big_nohaplotig	CDS	2963831	2963854	.	-	0	Parent=comp157462_c0_seq1.mrna1
ChrX	gffcl	locus	2966700	2967647	.	-	.	ID=RLOC_00000155;geneIDs=FBgn0032597.1.path1;transcripts=FBgn0032597.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2966700	2967647	.	-	.	ID=FBgn0032597.1.mrna1;geneID=FBgn0032597.1.path1;Name=FBgn0032597.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=947;mismatches=1;indels=0;unknowns=0;Target=FBgn0032597.1 948 1 .;locus=RLOC_00000155
ChrX	stalkie_big_nohaplotig	exon	2966700	2967647	99	-	.	Parent=FBgn0032597.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	2966700	2967647	.	-	0	Parent=FBgn0032597.1.mrna1
ChrX	gffcl	locus	2969655	3290344	.	-	.	ID=RLOC_00000156;geneIDs=FBgn0262126.1.path1,comp187280_c0_seq1.path1;transcripts=comp187280_c0_seq1.mrna1,FBgn0262126.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	2969655	3290344	.	-	.	ID=comp187280_c0_seq1.mrna1;geneID=comp187280_c0_seq1.path1;Name=comp187280_c0_seq1;Dir=indeterminatecoverage=91.4;identity=98.5;matches=988;mismatches=8;indels=7;unknowns=0;Target=comp187280_c0_seq1 562 437 .;locus=RLOC_00000156
ChrX	stalkie_big_nohaplotig	exon	2969655	2970435	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 1122 342 .
ChrX	stalkie_big_nohaplotig	exon	2993066	2993069	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 341 338 .
ChrX	stalkie_big_nohaplotig	exon	2998862	2998863	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 337 336 .
ChrX	stalkie_big_nohaplotig	exon	3002913	3002915	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 335 333 .
ChrX	stalkie_big_nohaplotig	exon	3033589	3033591	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 332 330 .
ChrX	stalkie_big_nohaplotig	exon	3041627	3041629	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 329 327 .
ChrX	stalkie_big_nohaplotig	exon	3045706	3045713	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 326 319 .
ChrX	stalkie_big_nohaplotig	exon	3052583	3052590	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 318 311 .
ChrX	stalkie_big_nohaplotig	exon	3066848	3066851	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 310 307 .
ChrX	stalkie_big_nohaplotig	exon	3081036	3081038	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 306 304 .
ChrX	stalkie_big_nohaplotig	exon	3089305	3089310	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 303 298 .
ChrX	stalkie_big_nohaplotig	exon	3096296	3096303	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 297 290 .
ChrX	stalkie_big_nohaplotig	exon	3101548	3101550	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 289 287 .
ChrX	stalkie_big_nohaplotig	exon	3106027	3106034	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 286 279 .
ChrX	stalkie_big_nohaplotig	exon	3138710	3138714	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 278 274 .
ChrX	stalkie_big_nohaplotig	exon	3143572	3143576	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 273 269 .
ChrX	stalkie_big_nohaplotig	exon	3146707	3146712	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 268 263 .
ChrX	stalkie_big_nohaplotig	exon	3168942	3168951	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 262 253 .
ChrX	stalkie_big_nohaplotig	exon	3171510	3171512	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 252 250 .
ChrX	stalkie_big_nohaplotig	exon	3171595	3171605	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 249 239 .
ChrX	stalkie_big_nohaplotig	exon	3186473	3186478	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 238 233 .
ChrX	stalkie_big_nohaplotig	exon	3217022	3217042	46	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 232 205 .
ChrX	stalkie_big_nohaplotig	exon	3217606	3217610	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 204 200 .
ChrX	stalkie_big_nohaplotig	exon	3218641	3218642	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 199 198 .
ChrX	stalkie_big_nohaplotig	exon	3222884	3222894	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 197 187 .
ChrX	stalkie_big_nohaplotig	exon	3230633	3230636	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 186 183 .
ChrX	stalkie_big_nohaplotig	exon	3239256	3239259	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 182 179 .
ChrX	stalkie_big_nohaplotig	exon	3246638	3246639	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 178 177 .
ChrX	stalkie_big_nohaplotig	exon	3251881	3251882	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 176 175 .
ChrX	stalkie_big_nohaplotig	exon	3256659	3256660	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 174 173 .
ChrX	stalkie_big_nohaplotig	exon	3263752	3263754	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 172 170 .
ChrX	stalkie_big_nohaplotig	exon	3270191	3270197	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 169 163 .
ChrX	stalkie_big_nohaplotig	exon	3275364	3275368	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 162 158 .
ChrX	stalkie_big_nohaplotig	exon	3275547	3275560	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 134 121 .
ChrX	stalkie_big_nohaplotig	exon	3277738	3277739	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 120 119 .
ChrX	stalkie_big_nohaplotig	exon	3279672	3279675	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 118 115 .
ChrX	stalkie_big_nohaplotig	exon	3285863	3285871	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 114 106 .
ChrX	stalkie_big_nohaplotig	exon	3290337	3290344	100	-	.	Parent=comp187280_c0_seq1.mrna1;Target=comp187280_c0_seq1 105 98 .
ChrX	stalkie_big_nohaplotig	CDS	2970215	2970340	.	-	0	Parent=comp187280_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3035999	3049318	.	-	.	ID=FBgn0262126.1.mrna1;geneID=FBgn0262126.1.path1;Name=FBgn0262126.1;Dir=sensecoverage=100.0;identity=100.0;matches=3510;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000156
ChrX	stalkie_big_nohaplotig	exon	3035999	3036136	100	-	.	Parent=FBgn0262126.1.mrna1;Target=FBgn0262126.1 3373 3510 +
ChrX	stalkie_big_nohaplotig	exon	3036216	3037006	100	-	.	Parent=FBgn0262126.1.mrna1;Target=FBgn0262126.1 2582 3372 +
ChrX	stalkie_big_nohaplotig	exon	3042054	3042222	100	-	.	Parent=FBgn0262126.1.mrna1;Target=FBgn0262126.1 2413 2581 +
ChrX	stalkie_big_nohaplotig	exon	3042283	3042732	100	-	.	Parent=FBgn0262126.1.mrna1;Target=FBgn0262126.1 1963 2412 +
ChrX	stalkie_big_nohaplotig	exon	3042800	3043048	100	-	.	Parent=FBgn0262126.1.mrna1;Target=FBgn0262126.1 1714 1962 +
ChrX	stalkie_big_nohaplotig	exon	3043114	3043229	100	-	.	Parent=FBgn0262126.1.mrna1;Target=FBgn0262126.1 1598 1713 +
ChrX	stalkie_big_nohaplotig	exon	3043307	3043548	100	-	.	Parent=FBgn0262126.1.mrna1;Target=FBgn0262126.1 1356 1597 +
ChrX	stalkie_big_nohaplotig	exon	3043619	3043839	100	-	.	Parent=FBgn0262126.1.mrna1;Target=FBgn0262126.1 1135 1355 +
ChrX	stalkie_big_nohaplotig	exon	3043903	3044376	100	-	.	Parent=FBgn0262126.1.mrna1;Target=FBgn0262126.1 661 1134 +
ChrX	stalkie_big_nohaplotig	exon	3045289	3045759	100	-	.	Parent=FBgn0262126.1.mrna1;Target=FBgn0262126.1 190 660 +
ChrX	stalkie_big_nohaplotig	exon	3049130	3049318	100	-	.	Parent=FBgn0262126.1.mrna1;Target=FBgn0262126.1 1 189 +
ChrX	stalkie_big_nohaplotig	CDS	3035999	3036136	.	-	0	Parent=FBgn0262126.1.mrna1;Target=FBgn0262126.1 3373 3510 +
ChrX	stalkie_big_nohaplotig	CDS	3036216	3037006	.	-	2	Parent=FBgn0262126.1.mrna1;Target=FBgn0262126.1 2582 3372 +
ChrX	stalkie_big_nohaplotig	CDS	3042054	3042222	.	-	0	Parent=FBgn0262126.1.mrna1;Target=FBgn0262126.1 2413 2581 +
ChrX	stalkie_big_nohaplotig	CDS	3042283	3042732	.	-	0	Parent=FBgn0262126.1.mrna1;Target=FBgn0262126.1 1963 2412 +
ChrX	stalkie_big_nohaplotig	CDS	3042800	3043048	.	-	0	Parent=FBgn0262126.1.mrna1;Target=FBgn0262126.1 1714 1962 +
ChrX	stalkie_big_nohaplotig	CDS	3043114	3043229	.	-	2	Parent=FBgn0262126.1.mrna1;Target=FBgn0262126.1 1598 1713 +
ChrX	stalkie_big_nohaplotig	CDS	3043307	3043548	.	-	1	Parent=FBgn0262126.1.mrna1;Target=FBgn0262126.1 1356 1597 +
ChrX	stalkie_big_nohaplotig	CDS	3043619	3043839	.	-	0	Parent=FBgn0262126.1.mrna1;Target=FBgn0262126.1 1135 1355 +
ChrX	stalkie_big_nohaplotig	CDS	3043903	3044376	.	-	0	Parent=FBgn0262126.1.mrna1;Target=FBgn0262126.1 661 1134 +
ChrX	stalkie_big_nohaplotig	CDS	3045289	3045759	.	-	0	Parent=FBgn0262126.1.mrna1;Target=FBgn0262126.1 190 660 +
ChrX	stalkie_big_nohaplotig	CDS	3049130	3049318	.	-	0	Parent=FBgn0262126.1.mrna1;Target=FBgn0262126.1 1 189 +
ChrX	gffcl	locus	3004787	3010708	.	+	.	ID=RLOC_00000157;geneIDs=FBgn0032706.1.path1;transcripts=FBgn0032706.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3004787	3010708	.	+	.	ID=FBgn0032706.1.mrna1;geneID=FBgn0032706.1.path1;Name=FBgn0032706.1;Dir=sensecoverage=100.0;identity=100.0;matches=1332;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000157
ChrX	stalkie_big_nohaplotig	exon	3004787	3005022	100	+	.	Parent=FBgn0032706.1.mrna1;Target=FBgn0032706.1 1 236 +
ChrX	stalkie_big_nohaplotig	exon	3007164	3007228	100	+	.	Parent=FBgn0032706.1.mrna1;Target=FBgn0032706.1 237 301 +
ChrX	stalkie_big_nohaplotig	exon	3007298	3007431	100	+	.	Parent=FBgn0032706.1.mrna1;Target=FBgn0032706.1 302 435 +
ChrX	stalkie_big_nohaplotig	exon	3009568	3009963	100	+	.	Parent=FBgn0032706.1.mrna1;Target=FBgn0032706.1 436 831 +
ChrX	stalkie_big_nohaplotig	exon	3010071	3010177	100	+	.	Parent=FBgn0032706.1.mrna1;Target=FBgn0032706.1 832 938 +
ChrX	stalkie_big_nohaplotig	exon	3010251	3010587	100	+	.	Parent=FBgn0032706.1.mrna1;Target=FBgn0032706.1 939 1275 +
ChrX	stalkie_big_nohaplotig	exon	3010652	3010708	100	+	.	Parent=FBgn0032706.1.mrna1;Target=FBgn0032706.1 1276 1332 +
ChrX	stalkie_big_nohaplotig	CDS	3004787	3005022	.	+	0	Parent=FBgn0032706.1.mrna1;Target=FBgn0032706.1 1 236 +
ChrX	stalkie_big_nohaplotig	CDS	3007164	3007228	.	+	1	Parent=FBgn0032706.1.mrna1;Target=FBgn0032706.1 237 301 +
ChrX	stalkie_big_nohaplotig	CDS	3007298	3007431	.	+	2	Parent=FBgn0032706.1.mrna1;Target=FBgn0032706.1 302 435 +
ChrX	stalkie_big_nohaplotig	CDS	3009568	3009963	.	+	0	Parent=FBgn0032706.1.mrna1;Target=FBgn0032706.1 436 831 +
ChrX	stalkie_big_nohaplotig	CDS	3010071	3010177	.	+	0	Parent=FBgn0032706.1.mrna1;Target=FBgn0032706.1 832 938 +
ChrX	stalkie_big_nohaplotig	CDS	3010251	3010587	.	+	1	Parent=FBgn0032706.1.mrna1;Target=FBgn0032706.1 939 1275 +
ChrX	stalkie_big_nohaplotig	CDS	3010652	3010708	.	+	0	Parent=FBgn0032706.1.mrna1;Target=FBgn0032706.1 1276 1332 +
ChrX	gffcl	locus	3012394	3015845	.	-	.	ID=RLOC_00000158;geneIDs=FBgn0032705.1.path1;transcripts=FBgn0032705.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3012394	3015845	.	-	.	ID=FBgn0032705.1.mrna1;geneID=FBgn0032705.1.path1;Name=FBgn0032705.1;Dir=sensecoverage=100.0;identity=100.0;matches=2030;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000158
ChrX	stalkie_big_nohaplotig	exon	3012394	3012974	100	-	.	Parent=FBgn0032705.1.mrna1;Target=FBgn0032705.1 1451 2031 +
ChrX	stalkie_big_nohaplotig	exon	3013034	3013815	99	-	.	Parent=FBgn0032705.1.mrna1;Target=FBgn0032705.1 669 1450 +
ChrX	stalkie_big_nohaplotig	exon	3014942	3015077	100	-	.	Parent=FBgn0032705.1.mrna1;Target=FBgn0032705.1 533 668 +
ChrX	stalkie_big_nohaplotig	exon	3015136	3015294	100	-	.	Parent=FBgn0032705.1.mrna1;Target=FBgn0032705.1 374 532 +
ChrX	stalkie_big_nohaplotig	exon	3015473	3015845	100	-	.	Parent=FBgn0032705.1.mrna1;Target=FBgn0032705.1 1 373 +
ChrX	stalkie_big_nohaplotig	CDS	3012394	3012974	.	-	2	Parent=FBgn0032705.1.mrna1;Target=FBgn0032705.1 1451 2031 +
ChrX	stalkie_big_nohaplotig	CDS	3013034	3013815	.	-	1	Parent=FBgn0032705.1.mrna1;Target=FBgn0032705.1 669 1450 +
ChrX	stalkie_big_nohaplotig	CDS	3014942	3015077	.	-	2	Parent=FBgn0032705.1.mrna1;Target=FBgn0032705.1 533 668 +
ChrX	stalkie_big_nohaplotig	CDS	3015136	3015294	.	-	2	Parent=FBgn0032705.1.mrna1;Target=FBgn0032705.1 374 532 +
ChrX	stalkie_big_nohaplotig	CDS	3015473	3015845	.	-	0	Parent=FBgn0032705.1.mrna1;Target=FBgn0032705.1 1 373 +
ChrX	gffcl	locus	3018509	3030795	.	+	.	ID=RLOC_00000159;geneIDs=FBgn0010704.1.path1;transcripts=FBgn0010704.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3018509	3030795	.	+	.	ID=FBgn0010704.1.mrna1;geneID=FBgn0010704.1.path1;Name=FBgn0010704.1;Dir=sensecoverage=100.0;identity=100.0;matches=927;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000159
ChrX	stalkie_big_nohaplotig	exon	3018509	3018763	100	+	.	Parent=FBgn0010704.1.mrna1;Target=FBgn0010704.1 1 255 +
ChrX	stalkie_big_nohaplotig	exon	3028747	3028874	100	+	.	Parent=FBgn0010704.1.mrna1;Target=FBgn0010704.1 256 383 +
ChrX	stalkie_big_nohaplotig	exon	3028938	3029059	100	+	.	Parent=FBgn0010704.1.mrna1;Target=FBgn0010704.1 384 505 +
ChrX	stalkie_big_nohaplotig	exon	3029135	3029310	100	+	.	Parent=FBgn0010704.1.mrna1;Target=FBgn0010704.1 506 681 +
ChrX	stalkie_big_nohaplotig	exon	3030550	3030795	100	+	.	Parent=FBgn0010704.1.mrna1;Target=FBgn0010704.1 682 927 +
ChrX	stalkie_big_nohaplotig	CDS	3018509	3018763	.	+	0	Parent=FBgn0010704.1.mrna1;Target=FBgn0010704.1 1 255 +
ChrX	stalkie_big_nohaplotig	CDS	3028747	3028874	.	+	0	Parent=FBgn0010704.1.mrna1;Target=FBgn0010704.1 256 383 +
ChrX	stalkie_big_nohaplotig	CDS	3028938	3029059	.	+	1	Parent=FBgn0010704.1.mrna1;Target=FBgn0010704.1 384 505 +
ChrX	stalkie_big_nohaplotig	CDS	3029135	3029310	.	+	2	Parent=FBgn0010704.1.mrna1;Target=FBgn0010704.1 506 681 +
ChrX	stalkie_big_nohaplotig	CDS	3030550	3030795	.	+	0	Parent=FBgn0010704.1.mrna1;Target=FBgn0010704.1 682 927 +
ChrX	gffcl	locus	3071427	3072506	.	-	.	ID=RLOC_00000160;geneIDs=FBgn0031407.2.path1;transcripts=FBgn0031407.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3071427	3072506	.	-	.	ID=FBgn0031407.2.mrna1;geneID=FBgn0031407.2.path1;Name=FBgn0031407.2;Dir=sensecoverage=100.0;identity=100.0;matches=450;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000160
ChrX	stalkie_big_nohaplotig	exon	3071427	3071523	100	-	.	Parent=FBgn0031407.2.mrna1;Target=FBgn0031407.2 354 450 +
ChrX	stalkie_big_nohaplotig	exon	3072088	3072314	100	-	.	Parent=FBgn0031407.2.mrna1;Target=FBgn0031407.2 127 353 +
ChrX	stalkie_big_nohaplotig	exon	3072381	3072506	100	-	.	Parent=FBgn0031407.2.mrna1;Target=FBgn0031407.2 1 126 +
ChrX	stalkie_big_nohaplotig	CDS	3071427	3071523	.	-	1	Parent=FBgn0031407.2.mrna1;Target=FBgn0031407.2 354 450 +
ChrX	stalkie_big_nohaplotig	CDS	3072088	3072314	.	-	0	Parent=FBgn0031407.2.mrna1;Target=FBgn0031407.2 127 353 +
ChrX	stalkie_big_nohaplotig	CDS	3072381	3072506	.	-	0	Parent=FBgn0031407.2.mrna1;Target=FBgn0031407.2 1 126 +
ChrX	gffcl	locus	3072959	3076923	.	-	.	ID=RLOC_00000161;geneIDs=FBgn0031407.1.path1;transcripts=FBgn0031407.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3072959	3076923	.	-	.	ID=FBgn0031407.1.mrna1;geneID=FBgn0031407.1.path1;Name=FBgn0031407.1;Dir=sensecoverage=100.0;identity=100.0;matches=513;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000161
ChrX	stalkie_big_nohaplotig	exon	3072959	3073046	100	-	.	Parent=FBgn0031407.1.mrna1;Target=FBgn0031407.1 426 513 +
ChrX	stalkie_big_nohaplotig	exon	3073107	3073333	100	-	.	Parent=FBgn0031407.1.mrna1;Target=FBgn0031407.1 199 425 +
ChrX	stalkie_big_nohaplotig	exon	3073393	3073508	100	-	.	Parent=FBgn0031407.1.mrna1;Target=FBgn0031407.1 83 198 +
ChrX	stalkie_big_nohaplotig	exon	3076496	3076559	100	-	.	Parent=FBgn0031407.1.mrna1;Target=FBgn0031407.1 19 82 +
ChrX	stalkie_big_nohaplotig	exon	3076906	3076923	100	-	.	Parent=FBgn0031407.1.mrna1;Target=FBgn0031407.1 1 18 +
ChrX	stalkie_big_nohaplotig	CDS	3072959	3073046	.	-	1	Parent=FBgn0031407.1.mrna1;Target=FBgn0031407.1 426 513 +
ChrX	stalkie_big_nohaplotig	CDS	3073107	3073333	.	-	0	Parent=FBgn0031407.1.mrna1;Target=FBgn0031407.1 199 425 +
ChrX	stalkie_big_nohaplotig	CDS	3073393	3073508	.	-	2	Parent=FBgn0031407.1.mrna1;Target=FBgn0031407.1 83 198 +
ChrX	stalkie_big_nohaplotig	CDS	3076496	3076559	.	-	0	Parent=FBgn0031407.1.mrna1;Target=FBgn0031407.1 19 82 +
ChrX	stalkie_big_nohaplotig	CDS	3076906	3076923	.	-	0	Parent=FBgn0031407.1.mrna1;Target=FBgn0031407.1 1 18 +
ChrX	gffcl	locus	3073924	3074842	.	-	.	ID=RLOC_00000162;geneIDs=comp132022_c1_seq1.path1;transcripts=comp132022_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3073924	3074842	.	-	.	ID=comp132022_c1_seq1.mrna1;geneID=comp132022_c1_seq1.path1;Name=comp132022_c1_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=825;mismatches=0;indels=0;unknowns=0;Target=comp132022_c1_seq1 656 823 .;locus=RLOC_00000162
ChrX	stalkie_big_nohaplotig	exon	3073924	3074186	100	-	.	Parent=comp132022_c1_seq1.mrna1;Target=comp132022_c1_seq1 1 263 -
ChrX	stalkie_big_nohaplotig	exon	3074281	3074842	100	-	.	Parent=comp132022_c1_seq1.mrna1;Target=comp132022_c1_seq1 264 825 -
ChrX	stalkie_big_nohaplotig	CDS	3074673	3074840	.	-	0	Parent=comp132022_c1_seq1.mrna1
ChrX	gffcl	locus	3108540	3109071	.	-	.	ID=RLOC_00000163;geneIDs=comp150268_c0_seq1.path1;transcripts=comp150268_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3108540	3109071	.	-	.	ID=comp150268_c0_seq1.mrna1;geneID=comp150268_c0_seq1.path1;Name=comp150268_c0_seq1;Dir=antisensecoverage=95.7;identity=98.5;matches=460;mismatches=7;indels=0;unknowns=0;locus=RLOC_00000163
ChrX	stalkie_big_nohaplotig	exon	3108540	3108924	99	-	.	Parent=comp150268_c0_seq1.mrna1;Target=comp150268_c0_seq1 1 385 -
ChrX	stalkie_big_nohaplotig	exon	3108990	3109071	95	-	.	Parent=comp150268_c0_seq1.mrna1;Target=comp150268_c0_seq1 386 467 -
ChrX	stalkie_big_nohaplotig	CDS	3108631	3108924	.	-	0	Parent=comp150268_c0_seq1.mrna1;Target=comp150268_c0_seq1 92 385 .
ChrX	stalkie_big_nohaplotig	CDS	3108990	3109070	.	-	0	Parent=comp150268_c0_seq1.mrna1;Target=comp150268_c0_seq1 386 466 .
ChrX	gffcl	locus	3113270	3116604	.	+	.	ID=RLOC_00000164;geneIDs=FBgn0010287.1.path1;transcripts=FBgn0010287.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3113270	3116604	.	+	.	ID=FBgn0010287.1.mrna1;geneID=FBgn0010287.1.path1;Name=FBgn0010287.1;Dir=sensecoverage=100.0;identity=99.9;matches=752;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000164
ChrX	stalkie_big_nohaplotig	exon	3113270	3113283	100	+	.	Parent=FBgn0010287.1.mrna1;Target=FBgn0010287.1 1 14 +
ChrX	stalkie_big_nohaplotig	exon	3113391	3113505	100	+	.	Parent=FBgn0010287.1.mrna1;Target=FBgn0010287.1 15 129 +
ChrX	stalkie_big_nohaplotig	exon	3113563	3113672	100	+	.	Parent=FBgn0010287.1.mrna1;Target=FBgn0010287.1 130 239 +
ChrX	stalkie_big_nohaplotig	exon	3116091	3116604	99	+	.	Parent=FBgn0010287.1.mrna1;Target=FBgn0010287.1 240 753 +
ChrX	stalkie_big_nohaplotig	CDS	3113270	3113283	.	+	0	Parent=FBgn0010287.1.mrna1;Target=FBgn0010287.1 1 14 +
ChrX	stalkie_big_nohaplotig	CDS	3113391	3113505	.	+	1	Parent=FBgn0010287.1.mrna1;Target=FBgn0010287.1 15 129 +
ChrX	stalkie_big_nohaplotig	CDS	3113563	3113672	.	+	0	Parent=FBgn0010287.1.mrna1;Target=FBgn0010287.1 130 239 +
ChrX	stalkie_big_nohaplotig	CDS	3116091	3116604	.	+	1	Parent=FBgn0010287.1.mrna1;Target=FBgn0010287.1 240 753 +
ChrX	gffcl	locus	3215584	3216902	.	-	.	ID=RLOC_00000165;geneIDs=FBgn0031235.1.path1;transcripts=FBgn0031235.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3215584	3216902	.	-	.	ID=FBgn0031235.1.mrna1;geneID=FBgn0031235.1.path1;Name=FBgn0031235.1;Dir=sensecoverage=100.0;identity=99.7;matches=1238;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000165
ChrX	stalkie_big_nohaplotig	exon	3215584	3216332	99	-	.	Parent=FBgn0031235.1.mrna1;Target=FBgn0031235.1 494 1242 +
ChrX	stalkie_big_nohaplotig	exon	3216410	3216902	99	-	.	Parent=FBgn0031235.1.mrna1;Target=FBgn0031235.1 1 493 +
ChrX	stalkie_big_nohaplotig	CDS	3215584	3216332	.	-	2	Parent=FBgn0031235.1.mrna1;Target=FBgn0031235.1 494 1242 +
ChrX	stalkie_big_nohaplotig	CDS	3216410	3216902	.	-	0	Parent=FBgn0031235.1.mrna1;Target=FBgn0031235.1 1 493 +
ChrX	gffcl	locus	3227512	3228483	.	-	.	ID=RLOC_00000166;geneIDs=FBgn0034215.2.path1;transcripts=FBgn0034215.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3227512	3228483	.	-	.	ID=FBgn0034215.2.mrna1;geneID=FBgn0034215.2.path1;Name=FBgn0034215.2;Dir=sensecoverage=100.0;identity=100.0;matches=912;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000166
ChrX	stalkie_big_nohaplotig	exon	3227512	3227619	100	-	.	Parent=FBgn0034215.2.mrna1;Target=FBgn0034215.2 805 912 +
ChrX	stalkie_big_nohaplotig	exon	3227680	3228483	100	-	.	Parent=FBgn0034215.2.mrna1;Target=FBgn0034215.2 1 804 +
ChrX	stalkie_big_nohaplotig	CDS	3227512	3227619	.	-	0	Parent=FBgn0034215.2.mrna1;Target=FBgn0034215.2 805 912 +
ChrX	stalkie_big_nohaplotig	CDS	3227680	3228483	.	-	0	Parent=FBgn0034215.2.mrna1;Target=FBgn0034215.2 1 804 +
ChrX	gffcl	locus	3256920	3260450	.	+	.	ID=RLOC_00000167;geneIDs=ORF46.path1;transcripts=ORF46.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3256920	3260450	.	+	.	ID=ORF46.mrna1;geneID=ORF46.path1;Name=ORF46;Dir=indeterminatecoverage=100.0;identity=100.0;matches=3531;mismatches=0;indels=0;unknowns=0;Target=ORF46 3531 1 .;locus=RLOC_00000167
ChrX	stalkie_big_nohaplotig	exon	3256920	3260450	100	+	.	Parent=ORF46.mrna1
ChrX	stalkie_big_nohaplotig	CDS	3256920	3260450	.	+	0	Parent=ORF46.mrna1
ChrX	gffcl	locus	3279942	3281225	.	-	.	ID=RLOC_00000168;geneIDs=comp135269_c0_seq1.path1;transcripts=comp135269_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3279942	3281225	.	-	.	ID=comp135269_c0_seq1.mrna1;geneID=comp135269_c0_seq1.path1;Name=comp135269_c0_seq1;Dir=sensecoverage=97.4;identity=100.0;matches=800;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000168
ChrX	stalkie_big_nohaplotig	exon	3279942	3280175	100	-	.	Parent=comp135269_c0_seq1.mrna1;Target=comp135269_c0_seq1 568 801 +
ChrX	stalkie_big_nohaplotig	exon	3280250	3280543	100	-	.	Parent=comp135269_c0_seq1.mrna1;Target=comp135269_c0_seq1 274 567 +
ChrX	stalkie_big_nohaplotig	exon	3280954	3281225	100	-	.	Parent=comp135269_c0_seq1.mrna1;Target=comp135269_c0_seq1 2 273 +
ChrX	stalkie_big_nohaplotig	CDS	3280289	3280543	.	-	0	Parent=comp135269_c0_seq1.mrna1;Target=comp135269_c0_seq1 274 528 +
ChrX	stalkie_big_nohaplotig	CDS	3280954	3281043	.	-	0	Parent=comp135269_c0_seq1.mrna1;Target=comp135269_c0_seq1 184 273 +
ChrX	gffcl	locus	3293610	3295544	.	+	.	ID=RLOC_00000169;geneIDs=ORF1149.path2;transcripts=ORF1149.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	3293610	3295544	.	+	.	ID=ORF1149.mrna2;geneID=ORF1149.path2;Name=ORF1149;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1206;mismatches=6;indels=0;unknowns=0;locus=RLOC_00000169
ChrX	stalkie_big_nohaplotig	exon	3293610	3293642	100	+	.	Parent=ORF1149.mrna2;Target=ORF1149 33 1 .
ChrX	stalkie_big_nohaplotig	exon	3294048	3294387	98	+	.	Parent=ORF1149.mrna2;Target=ORF1149 373 34 .
ChrX	stalkie_big_nohaplotig	exon	3294706	3295544	99	+	.	Parent=ORF1149.mrna2;Target=ORF1149 1212 374 .
ChrX	stalkie_big_nohaplotig	CDS	3293610	3293642	.	+	0	Parent=ORF1149.mrna2;Target=ORF1149 33 1 .
ChrX	stalkie_big_nohaplotig	CDS	3294048	3294387	.	+	0	Parent=ORF1149.mrna2;Target=ORF1149 373 34 .
ChrX	stalkie_big_nohaplotig	CDS	3294706	3295544	.	+	2	Parent=ORF1149.mrna2;Target=ORF1149 1212 374 .
ChrX	gffcl	locus	3297115	3298263	.	-	.	ID=RLOC_00000170;geneIDs=comp152590_c0_seq1.path1;transcripts=comp152590_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3297115	3298263	.	-	.	ID=comp152590_c0_seq1.mrna1;geneID=comp152590_c0_seq1.path1;Name=comp152590_c0_seq1;Dir=sensecoverage=99.9;identity=99.6;matches=1059;mismatches=4;indels=0;unknowns=0;Target=comp152590_c0_seq1 340 705 +;locus=RLOC_00000170
ChrX	stalkie_big_nohaplotig	exon	3297115	3297440	100	-	.	Parent=comp152590_c0_seq1.mrna1;Target=comp152590_c0_seq1 739 1064 +
ChrX	stalkie_big_nohaplotig	exon	3297527	3298263	99	-	.	Parent=comp152590_c0_seq1.mrna1;Target=comp152590_c0_seq1 2 738 +
ChrX	stalkie_big_nohaplotig	CDS	3297560	3297925	.	-	0	Parent=comp152590_c0_seq1.mrna1
ChrX	gffcl	locus	3312817	3314912	.	-	.	ID=RLOC_00000171;geneIDs=ORF1149.path1;transcripts=ORF1149.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3312817	3314912	.	-	.	ID=ORF1149.mrna1;geneID=ORF1149.path1;Name=ORF1149;Dir=sensecoverage=100.0;identity=99.8;matches=1210;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000171
ChrX	stalkie_big_nohaplotig	exon	3312817	3313655	99	-	.	Parent=ORF1149.mrna1;Target=ORF1149 374 1212 +
ChrX	stalkie_big_nohaplotig	exon	3314133	3314473	99	-	.	Parent=ORF1149.mrna1;Target=ORF1149 33 373 +
ChrX	stalkie_big_nohaplotig	exon	3314881	3314912	100	-	.	Parent=ORF1149.mrna1;Target=ORF1149 1 32 +
ChrX	stalkie_big_nohaplotig	CDS	3312817	3313655	.	-	2	Parent=ORF1149.mrna1;Target=ORF1149 374 1212 +
ChrX	stalkie_big_nohaplotig	CDS	3314133	3314473	.	-	1	Parent=ORF1149.mrna1;Target=ORF1149 33 373 +
ChrX	stalkie_big_nohaplotig	CDS	3314881	3314912	.	-	0	Parent=ORF1149.mrna1;Target=ORF1149 1 32 +
ChrX	gffcl	locus	3328780	3331512	.	-	.	ID=RLOC_00000172;geneIDs=FBgn0032973.1.path1;transcripts=FBgn0032973.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3328780	3331512	.	-	.	ID=FBgn0032973.1.mrna1;geneID=FBgn0032973.1.path1;Name=FBgn0032973.1;Dir=sensecoverage=100.0;identity=100.0;matches=1248;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000172
ChrX	stalkie_big_nohaplotig	exon	3328780	3329497	100	-	.	Parent=FBgn0032973.1.mrna1;Target=FBgn0032973.1 531 1248 +
ChrX	stalkie_big_nohaplotig	exon	3329562	3329979	100	-	.	Parent=FBgn0032973.1.mrna1;Target=FBgn0032973.1 113 530 +
ChrX	stalkie_big_nohaplotig	exon	3331401	3331512	100	-	.	Parent=FBgn0032973.1.mrna1;Target=FBgn0032973.1 1 112 +
ChrX	stalkie_big_nohaplotig	CDS	3328780	3329497	.	-	1	Parent=FBgn0032973.1.mrna1;Target=FBgn0032973.1 531 1248 +
ChrX	stalkie_big_nohaplotig	CDS	3329562	3329979	.	-	2	Parent=FBgn0032973.1.mrna1;Target=FBgn0032973.1 113 530 +
ChrX	stalkie_big_nohaplotig	CDS	3331401	3331512	.	-	0	Parent=FBgn0032973.1.mrna1;Target=FBgn0032973.1 1 112 +
ChrX	gffcl	locus	3344803	3349136	.	-	.	ID=RLOC_00000173;geneIDs=comp935603_c0_seq1.path1;transcripts=comp935603_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3344803	3349136	.	-	.	ID=comp935603_c0_seq1.mrna1;geneID=comp935603_c0_seq1.path1;Name=comp935603_c0_seq1;Dir=antisensecoverage=96.4;identity=100.0;matches=456;mismatches=0;indels=0;unknowns=0;Target=comp935603_c0_seq1 341 472 .;locus=RLOC_00000173
ChrX	stalkie_big_nohaplotig	exon	3344803	3345040	100	-	.	Parent=comp935603_c0_seq1.mrna1;Target=comp935603_c0_seq1 18 255 -
ChrX	stalkie_big_nohaplotig	exon	3348919	3349136	100	-	.	Parent=comp935603_c0_seq1.mrna1;Target=comp935603_c0_seq1 256 473 -
ChrX	stalkie_big_nohaplotig	CDS	3349004	3349135	.	-	0	Parent=comp935603_c0_seq1.mrna1
ChrX	gffcl	locus	3355285	3356488	.	+	.	ID=RLOC_00000174;geneIDs=ORF1331.path1;transcripts=ORF1331.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3355285	3356488	.	+	.	ID=ORF1331.mrna1;geneID=ORF1331.path1;Name=ORF1331;Dir=sensecoverage=100.0;identity=100.0;matches=1137;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000174
ChrX	stalkie_big_nohaplotig	exon	3355285	3356380	100	+	.	Parent=ORF1331.mrna1;Target=ORF1331 1 1096 +
ChrX	stalkie_big_nohaplotig	exon	3356448	3356488	100	+	.	Parent=ORF1331.mrna1;Target=ORF1331 1097 1137 +
ChrX	stalkie_big_nohaplotig	CDS	3355285	3356380	.	+	0	Parent=ORF1331.mrna1;Target=ORF1331 1 1096 +
ChrX	stalkie_big_nohaplotig	CDS	3356448	3356488	.	+	2	Parent=ORF1331.mrna1;Target=ORF1331 1097 1137 +
ChrX	gffcl	locus	3357551	3360071	.	+	.	ID=RLOC_00000175;geneIDs=ORF360.path1;transcripts=ORF360.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3357551	3360071	.	+	.	ID=ORF360.mrna1;geneID=ORF360.path1;Name=ORF360;Dir=sensecoverage=100.0;identity=99.9;matches=1957;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000175
ChrX	stalkie_big_nohaplotig	exon	3357551	3359426	99	+	.	Parent=ORF360.mrna1;Target=ORF360 1 1876 +
ChrX	stalkie_big_nohaplotig	exon	3359989	3360071	100	+	.	Parent=ORF360.mrna1;Target=ORF360 1877 1959 +
ChrX	stalkie_big_nohaplotig	CDS	3357551	3359426	.	+	0	Parent=ORF360.mrna1;Target=ORF360 1 1876 +
ChrX	stalkie_big_nohaplotig	CDS	3359989	3360071	.	+	2	Parent=ORF360.mrna1;Target=ORF360 1877 1959 +
ChrX	gffcl	locus	3391309	3391705	.	+	.	ID=RLOC_00000177;geneIDs=comp151408_c0_seq1.path1;transcripts=comp151408_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3391309	3391705	.	+	.	ID=comp151408_c0_seq1.mrna1;geneID=comp151408_c0_seq1.path1;Name=comp151408_c0_seq1;Dir=indeterminatecoverage=99.7;identity=95.7;matches=380;mismatches=17;indels=0;unknowns=0;Target=comp151408_c0_seq1 397 1 .;CDS_Target=comp151408_c0_seq1 363 1 .;locus=RLOC_00000177
ChrX	stalkie_big_nohaplotig	exon	3391309	3391705	95	+	.	Parent=comp151408_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	3391309	3391671	.	+	0	Parent=comp151408_c0_seq1.mrna1
ChrX	gffcl	locus	3521022	3521213	.	+	.	ID=RLOC_00000179;geneIDs=comp135509_c0_seq1.path1;transcripts=comp135509_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3521022	3521213	.	+	.	ID=comp135509_c0_seq1.mrna1;geneID=comp135509_c0_seq1.path1;Name=comp135509_c0_seq1;Dir=indeterminatecoverage=91.7;identity=97.9;matches=188;mismatches=1;indels=3;unknowns=0;Target=comp135509_c0_seq1 206 18 .;CDS_Target=comp135509_c0_seq1 43 20 .;locus=RLOC_00000179
ChrX	stalkie_big_nohaplotig	exon	3521022	3521213	97	+	.	Parent=comp135509_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	3521024	3521049	.	+	0	Parent=comp135509_c0_seq1.mrna1
ChrX	gffcl	locus	3527147	3527526	.	-	.	ID=RLOC_00000180;geneIDs=comp185054_c0_seq1.path1;transcripts=comp185054_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3527147	3527526	.	-	.	ID=comp185054_c0_seq1.mrna1;geneID=comp185054_c0_seq1.path1;Name=comp185054_c0_seq1;Dir=indeterminatecoverage=93.4;identity=99.7;matches=379;mismatches=1;indels=0;unknowns=0;Target=comp185054_c0_seq1 395 16 .;CDS_Target=comp185054_c0_seq1 59 18 .;locus=RLOC_00000180
ChrX	stalkie_big_nohaplotig	exon	3527147	3527526	99	-	.	Parent=comp185054_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	3527483	3527524	.	-	0	Parent=comp185054_c0_seq1.mrna1
ChrX	gffcl	locus	3530345	3530860	.	-	.	ID=RLOC_00000181;geneIDs=comp136348_c0_seq1.path1;transcripts=comp136348_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3530345	3530860	.	-	.	ID=comp136348_c0_seq1.mrna1;geneID=comp136348_c0_seq1.path1;Name=comp136348_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=514;mismatches=2;indels=0;unknowns=0;Target=comp136348_c0_seq1 516 1 .;CDS_Target=comp136348_c0_seq1 495 406 .;locus=RLOC_00000181
ChrX	stalkie_big_nohaplotig	exon	3530345	3530860	99	-	.	Parent=comp136348_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	3530366	3530455	.	-	0	Parent=comp136348_c0_seq1.mrna1
ChrX	gffcl	locus	3532822	3533805	.	-	.	ID=RLOC_00000182;geneIDs=comp145897_c0_seq1.path1;transcripts=comp145897_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3532822	3533805	.	-	.	ID=comp145897_c0_seq1.mrna1;geneID=comp145897_c0_seq1.path1;Name=comp145897_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.9;matches=983;mismatches=1;indels=0;unknowns=0;Target=comp145897_c0_seq1 995 12 .;CDS_Target=comp145897_c0_seq1 190 14 .;locus=RLOC_00000182
ChrX	stalkie_big_nohaplotig	exon	3532822	3533805	99	-	.	Parent=comp145897_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	3533627	3533803	.	-	0	Parent=comp145897_c0_seq1.mrna1
ChrX	gffcl	locus	3534294	3536589	.	-	.	ID=RLOC_00000183;geneIDs=FBgn0014010.1.path1;transcripts=FBgn0014010.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3534294	3536589	.	-	.	ID=FBgn0014010.1.mrna1;geneID=FBgn0014010.1.path1;Name=FBgn0014010.1;Dir=sensecoverage=100.0;identity=100.0;matches=663;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000183
ChrX	stalkie_big_nohaplotig	exon	3534294	3534397	100	-	.	Parent=FBgn0014010.1.mrna1;Target=FBgn0014010.1 560 663 +
ChrX	stalkie_big_nohaplotig	exon	3534478	3534646	100	-	.	Parent=FBgn0014010.1.mrna1;Target=FBgn0014010.1 391 559 +
ChrX	stalkie_big_nohaplotig	exon	3536021	3536141	100	-	.	Parent=FBgn0014010.1.mrna1;Target=FBgn0014010.1 270 390 +
ChrX	stalkie_big_nohaplotig	exon	3536321	3536589	100	-	.	Parent=FBgn0014010.1.mrna1;Target=FBgn0014010.1 1 269 +
ChrX	stalkie_big_nohaplotig	CDS	3534294	3534397	.	-	2	Parent=FBgn0014010.1.mrna1;Target=FBgn0014010.1 560 663 +
ChrX	stalkie_big_nohaplotig	CDS	3534478	3534646	.	-	0	Parent=FBgn0014010.1.mrna1;Target=FBgn0014010.1 391 559 +
ChrX	stalkie_big_nohaplotig	CDS	3536021	3536141	.	-	1	Parent=FBgn0014010.1.mrna1;Target=FBgn0014010.1 270 390 +
ChrX	stalkie_big_nohaplotig	CDS	3536321	3536589	.	-	0	Parent=FBgn0014010.1.mrna1;Target=FBgn0014010.1 1 269 +
ChrX	gffcl	locus	3536715	3537075	.	+	.	ID=RLOC_00000184;geneIDs=comp117150_c0_seq1.path1;transcripts=comp117150_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3536715	3537075	.	+	.	ID=comp117150_c0_seq1.mrna1;geneID=comp117150_c0_seq1.path1;Name=comp117150_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=361;mismatches=0;indels=0;unknowns=0;Target=comp117150_c0_seq1 361 1 .;CDS_Target=comp117150_c0_seq1 46 2 .;locus=RLOC_00000184
ChrX	stalkie_big_nohaplotig	exon	3536715	3537075	100	+	.	Parent=comp117150_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	3536716	3536760	.	+	0	Parent=comp117150_c0_seq1.mrna1
ChrX	gffcl	locus	3568078	3572762	.	+	.	ID=RLOC_00000185;geneIDs=FBgn0052086.1.path1;transcripts=FBgn0052086.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3568078	3572762	.	+	.	ID=FBgn0052086.1.mrna1;geneID=FBgn0052086.1.path1;Name=FBgn0052086.1;Dir=sensecoverage=100.0;identity=99.8;matches=1530;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000185
ChrX	stalkie_big_nohaplotig	exon	3568078	3568110	100	+	.	Parent=FBgn0052086.1.mrna1;Target=FBgn0052086.1 1 33 +
ChrX	stalkie_big_nohaplotig	exon	3568169	3568227	100	+	.	Parent=FBgn0052086.1.mrna1;Target=FBgn0052086.1 34 92 +
ChrX	stalkie_big_nohaplotig	exon	3569261	3569761	100	+	.	Parent=FBgn0052086.1.mrna1;Target=FBgn0052086.1 93 593 +
ChrX	stalkie_big_nohaplotig	exon	3569818	3569988	99	+	.	Parent=FBgn0052086.1.mrna1;Target=FBgn0052086.1 594 764 +
ChrX	stalkie_big_nohaplotig	exon	3571994	3572762	99	+	.	Parent=FBgn0052086.1.mrna1;Target=FBgn0052086.1 765 1533 +
ChrX	stalkie_big_nohaplotig	CDS	3568078	3568110	.	+	0	Parent=FBgn0052086.1.mrna1;Target=FBgn0052086.1 1 33 +
ChrX	stalkie_big_nohaplotig	CDS	3568169	3568227	.	+	0	Parent=FBgn0052086.1.mrna1;Target=FBgn0052086.1 34 92 +
ChrX	stalkie_big_nohaplotig	CDS	3569261	3569761	.	+	1	Parent=FBgn0052086.1.mrna1;Target=FBgn0052086.1 93 593 +
ChrX	stalkie_big_nohaplotig	CDS	3569818	3569988	.	+	1	Parent=FBgn0052086.1.mrna1;Target=FBgn0052086.1 594 764 +
ChrX	stalkie_big_nohaplotig	CDS	3571994	3572762	.	+	1	Parent=FBgn0052086.1.mrna1;Target=FBgn0052086.1 765 1533 +
ChrX	gffcl	locus	3573634	3574409	.	-	.	ID=RLOC_00000186;geneIDs=comp149798_c0_seq1.path1;transcripts=comp149798_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3573634	3574409	.	-	.	ID=comp149798_c0_seq1.mrna1;geneID=comp149798_c0_seq1.path1;Name=comp149798_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=775;mismatches=1;indels=0;unknowns=0;Target=comp149798_c0_seq1 776 1 .;CDS_Target=comp149798_c0_seq1 226 122 .;locus=RLOC_00000186
ChrX	stalkie_big_nohaplotig	exon	3573634	3574409	99	-	.	Parent=comp149798_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	3574184	3574288	.	-	0	Parent=comp149798_c0_seq1.mrna1
ChrX	gffcl	locus	3574474	3574796	.	-	.	ID=RLOC_00000187;geneIDs=comp117488_c0_seq1.path1;transcripts=comp117488_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3574474	3574796	.	-	.	ID=comp117488_c0_seq1.mrna1;geneID=comp117488_c0_seq1.path1;Name=comp117488_c0_seq1;Dir=indeterminatecoverage=95.3;identity=98.1;matches=317;mismatches=6;indels=0;unknowns=0;Target=comp117488_c0_seq1 325 3 .;CDS_Target=comp117488_c0_seq1 325 185 .;locus=RLOC_00000187
ChrX	stalkie_big_nohaplotig	exon	3574474	3574796	98	-	.	Parent=comp117488_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	3574474	3574614	.	-	0	Parent=comp117488_c0_seq1.mrna1
ChrX	gffcl	locus	3575188	3578660	.	-	.	ID=RLOC_00000188;geneIDs=FBgn0086707.1.path1,comp144057_c0_seq1.path1;transcripts=FBgn0086707.1.mrna1,comp144057_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3575188	3578660	.	-	.	ID=FBgn0086707.1.mrna1;geneID=FBgn0086707.1.path1;Name=FBgn0086707.1;Dir=sensecoverage=100.0;identity=99.8;matches=2426;mismatches=1;indels=3;unknowns=0;locus=RLOC_00000188
ChrX	stalkie_big_nohaplotig	exon	3575188	3576422	99	-	.	Parent=FBgn0086707.1.mrna1;Target=FBgn0086707.1 1196 2427 +
ChrX	stalkie_big_nohaplotig	exon	3576505	3577596	99	-	.	Parent=FBgn0086707.1.mrna1;Target=FBgn0086707.1 104 1195 +
ChrX	stalkie_big_nohaplotig	exon	3578558	3578660	100	-	.	Parent=FBgn0086707.1.mrna1;Target=FBgn0086707.1 1 103 +
ChrX	stalkie_big_nohaplotig	CDS	3575188	3576422	.	-	2	Parent=FBgn0086707.1.mrna1;Target=FBgn0086707.1 1196 2427 +
ChrX	stalkie_big_nohaplotig	CDS	3576505	3577596	.	-	2	Parent=FBgn0086707.1.mrna1;Target=FBgn0086707.1 104 1195 +
ChrX	stalkie_big_nohaplotig	CDS	3578558	3578660	.	-	0	Parent=FBgn0086707.1.mrna1;Target=FBgn0086707.1 1 103 +
ChrX	stalkie_big_nohaplotig	mRNA	3577573	3578580	.	-	.	ID=comp144057_c0_seq1.mrna1;geneID=comp144057_c0_seq1.path1;Name=comp144057_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1005;mismatches=3;indels=1;unknowns=0;Target=comp144057_c0_seq1 1009 1 .;CDS_Target=comp144057_c0_seq1 493 284 .;locus=RLOC_00000188
ChrX	stalkie_big_nohaplotig	exon	3577573	3578580	99	-	.	Parent=comp144057_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	3578089	3578297	.	-	0	Parent=comp144057_c0_seq1.mrna1
ChrX	gffcl	locus	3582736	3585209	.	-	.	ID=RLOC_00000189;geneIDs=FBgn0086707.2.path1;transcripts=FBgn0086707.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3582736	3585209	.	-	.	ID=FBgn0086707.2.mrna1;geneID=FBgn0086707.2.path1;Name=FBgn0086707.2;Dir=sensecoverage=100.0;identity=100.0;matches=2379;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000189
ChrX	stalkie_big_nohaplotig	exon	3582736	3584438	100	-	.	Parent=FBgn0086707.2.mrna1;Target=FBgn0086707.2 677 2379 +
ChrX	stalkie_big_nohaplotig	exon	3584534	3585209	100	-	.	Parent=FBgn0086707.2.mrna1;Target=FBgn0086707.2 1 676 +
ChrX	stalkie_big_nohaplotig	CDS	3582736	3584438	.	-	2	Parent=FBgn0086707.2.mrna1;Target=FBgn0086707.2 677 2379 +
ChrX	stalkie_big_nohaplotig	CDS	3584534	3585209	.	-	0	Parent=FBgn0086707.2.mrna1;Target=FBgn0086707.2 1 676 +
ChrX	gffcl	locus	3587880	3592598	.	-	.	ID=RLOC_00000190;geneIDs=comp160032_c1_seq1.path1;transcripts=comp160032_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3587880	3592598	.	-	.	ID=comp160032_c1_seq1.mrna1;geneID=comp160032_c1_seq1.path1;Name=comp160032_c1_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=2995;mismatches=8;indels=12;unknowns=0;locus=RLOC_00000190
ChrX	stalkie_big_nohaplotig	exon	3587880	3590744	99	-	.	Parent=comp160032_c1_seq1.mrna1;Target=comp160032_c1_seq1 1 2877 -
ChrX	stalkie_big_nohaplotig	exon	3592461	3592598	97	-	.	Parent=comp160032_c1_seq1.mrna1;Target=comp160032_c1_seq1 2878 3015 -
ChrX	stalkie_big_nohaplotig	CDS	3587880	3590744	.	-	0	Parent=comp160032_c1_seq1.mrna1;Target=comp160032_c1_seq1 1 2877 .
ChrX	stalkie_big_nohaplotig	CDS	3592461	3592598	.	-	0	Parent=comp160032_c1_seq1.mrna1;Target=comp160032_c1_seq1 2878 3015 .
ChrX	gffcl	locus	3597433	3604815	.	-	.	ID=RLOC_00000191;geneIDs=FBgn0032679.1.path1;transcripts=FBgn0032679.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3597433	3604815	.	-	.	ID=FBgn0032679.1.mrna1;geneID=FBgn0032679.1.path1;Name=FBgn0032679.1;Dir=sensecoverage=100.0;identity=100.0;matches=4205;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000191
ChrX	stalkie_big_nohaplotig	exon	3597433	3597971	100	-	.	Parent=FBgn0032679.1.mrna1;Target=FBgn0032679.1 3668 4206 +
ChrX	stalkie_big_nohaplotig	exon	3598046	3599180	100	-	.	Parent=FBgn0032679.1.mrna1;Target=FBgn0032679.1 2533 3667 +
ChrX	stalkie_big_nohaplotig	exon	3599902	3600422	99	-	.	Parent=FBgn0032679.1.mrna1;Target=FBgn0032679.1 2012 2532 +
ChrX	stalkie_big_nohaplotig	exon	3600482	3601348	100	-	.	Parent=FBgn0032679.1.mrna1;Target=FBgn0032679.1 1145 2011 +
ChrX	stalkie_big_nohaplotig	exon	3603342	3603816	100	-	.	Parent=FBgn0032679.1.mrna1;Target=FBgn0032679.1 670 1144 +
ChrX	stalkie_big_nohaplotig	exon	3603886	3604411	100	-	.	Parent=FBgn0032679.1.mrna1;Target=FBgn0032679.1 144 669 +
ChrX	stalkie_big_nohaplotig	exon	3604673	3604815	100	-	.	Parent=FBgn0032679.1.mrna1;Target=FBgn0032679.1 1 143 +
ChrX	stalkie_big_nohaplotig	CDS	3597433	3597971	.	-	2	Parent=FBgn0032679.1.mrna1;Target=FBgn0032679.1 3668 4206 +
ChrX	stalkie_big_nohaplotig	CDS	3598046	3599180	.	-	0	Parent=FBgn0032679.1.mrna1;Target=FBgn0032679.1 2533 3667 +
ChrX	stalkie_big_nohaplotig	CDS	3599902	3600422	.	-	2	Parent=FBgn0032679.1.mrna1;Target=FBgn0032679.1 2012 2532 +
ChrX	stalkie_big_nohaplotig	CDS	3600482	3601348	.	-	2	Parent=FBgn0032679.1.mrna1;Target=FBgn0032679.1 1145 2011 +
ChrX	stalkie_big_nohaplotig	CDS	3603342	3603816	.	-	0	Parent=FBgn0032679.1.mrna1;Target=FBgn0032679.1 670 1144 +
ChrX	stalkie_big_nohaplotig	CDS	3603886	3604411	.	-	1	Parent=FBgn0032679.1.mrna1;Target=FBgn0032679.1 144 669 +
ChrX	stalkie_big_nohaplotig	CDS	3604673	3604815	.	-	0	Parent=FBgn0032679.1.mrna1;Target=FBgn0032679.1 1 143 +
ChrX	gffcl	locus	3607866	3611974	.	+	.	ID=RLOC_00000192;geneIDs=FBgn0032393.1.path1;transcripts=FBgn0032393.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3607866	3611974	.	+	.	ID=FBgn0032393.1.mrna1;geneID=FBgn0032393.1.path1;Name=FBgn0032393.1;Dir=sensecoverage=100.0;identity=99.9;matches=1381;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000192
ChrX	stalkie_big_nohaplotig	exon	3607866	3607992	100	+	.	Parent=FBgn0032393.1.mrna1;Target=FBgn0032393.1 1 127 +
ChrX	stalkie_big_nohaplotig	exon	3608049	3608140	100	+	.	Parent=FBgn0032393.1.mrna1;Target=FBgn0032393.1 128 219 +
ChrX	stalkie_big_nohaplotig	exon	3608203	3608414	99	+	.	Parent=FBgn0032393.1.mrna1;Target=FBgn0032393.1 220 431 +
ChrX	stalkie_big_nohaplotig	exon	3610866	3611074	99	+	.	Parent=FBgn0032393.1.mrna1;Target=FBgn0032393.1 432 640 +
ChrX	stalkie_big_nohaplotig	exon	3611151	3611742	100	+	.	Parent=FBgn0032393.1.mrna1;Target=FBgn0032393.1 641 1232 +
ChrX	stalkie_big_nohaplotig	exon	3611824	3611974	100	+	.	Parent=FBgn0032393.1.mrna1;Target=FBgn0032393.1 1233 1383 +
ChrX	stalkie_big_nohaplotig	CDS	3607866	3607992	.	+	0	Parent=FBgn0032393.1.mrna1;Target=FBgn0032393.1 1 127 +
ChrX	stalkie_big_nohaplotig	CDS	3608049	3608140	.	+	2	Parent=FBgn0032393.1.mrna1;Target=FBgn0032393.1 128 219 +
ChrX	stalkie_big_nohaplotig	CDS	3608203	3608414	.	+	0	Parent=FBgn0032393.1.mrna1;Target=FBgn0032393.1 220 431 +
ChrX	stalkie_big_nohaplotig	CDS	3610866	3611074	.	+	1	Parent=FBgn0032393.1.mrna1;Target=FBgn0032393.1 432 640 +
ChrX	stalkie_big_nohaplotig	CDS	3611151	3611742	.	+	2	Parent=FBgn0032393.1.mrna1;Target=FBgn0032393.1 641 1232 +
ChrX	stalkie_big_nohaplotig	CDS	3611824	3611974	.	+	1	Parent=FBgn0032393.1.mrna1;Target=FBgn0032393.1 1233 1383 +
ChrX	gffcl	locus	3608718	3609335	.	+	.	ID=RLOC_00000193;geneIDs=comp137699_c0_seq1.path1;transcripts=comp137699_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3608718	3609335	.	+	.	ID=comp137699_c0_seq1.mrna1;geneID=comp137699_c0_seq1.path1;Name=comp137699_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=618;mismatches=0;indels=1;unknowns=0;Target=comp137699_c0_seq1 619 1 .;CDS_Target=comp137699_c0_seq1 338 204 .;locus=RLOC_00000193
ChrX	stalkie_big_nohaplotig	exon	3608718	3609335	99	+	.	Parent=comp137699_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	3608920	3609054	.	+	0	Parent=comp137699_c0_seq1.mrna1
ChrX	gffcl	locus	3621023	3621790	.	-	.	ID=RLOC_00000194;geneIDs=FBgn0032394.1.path1;transcripts=FBgn0032394.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3621023	3621790	.	-	.	ID=FBgn0032394.1.mrna1;geneID=FBgn0032394.1.path1;Name=FBgn0032394.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=767;mismatches=1;indels=0;unknowns=0;Target=FBgn0032394.1 768 1 .;locus=RLOC_00000194
ChrX	stalkie_big_nohaplotig	exon	3621023	3621790	99	-	.	Parent=FBgn0032394.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	3621023	3621790	.	-	0	Parent=FBgn0032394.1.mrna1
ChrX	gffcl	locus	3623863	3625499	.	+	.	ID=RLOC_00000195;geneIDs=FBgn0032858.1.path1;transcripts=FBgn0032858.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3623863	3625499	.	+	.	ID=FBgn0032858.1.mrna1;geneID=FBgn0032858.1.path1;Name=FBgn0032858.1;Dir=sensecoverage=100.0;identity=100.0;matches=1386;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000195
ChrX	stalkie_big_nohaplotig	exon	3623863	3624016	100	+	.	Parent=FBgn0032858.1.mrna1;Target=FBgn0032858.1 1 154 +
ChrX	stalkie_big_nohaplotig	exon	3624073	3624214	100	+	.	Parent=FBgn0032858.1.mrna1;Target=FBgn0032858.1 155 296 +
ChrX	stalkie_big_nohaplotig	exon	3624276	3624532	100	+	.	Parent=FBgn0032858.1.mrna1;Target=FBgn0032858.1 297 553 +
ChrX	stalkie_big_nohaplotig	exon	3624598	3624739	100	+	.	Parent=FBgn0032858.1.mrna1;Target=FBgn0032858.1 554 695 +
ChrX	stalkie_big_nohaplotig	exon	3624809	3625499	100	+	.	Parent=FBgn0032858.1.mrna1;Target=FBgn0032858.1 696 1386 +
ChrX	stalkie_big_nohaplotig	CDS	3623863	3624016	.	+	0	Parent=FBgn0032858.1.mrna1;Target=FBgn0032858.1 1 154 +
ChrX	stalkie_big_nohaplotig	CDS	3624073	3624214	.	+	2	Parent=FBgn0032858.1.mrna1;Target=FBgn0032858.1 155 296 +
ChrX	stalkie_big_nohaplotig	CDS	3624276	3624532	.	+	1	Parent=FBgn0032858.1.mrna1;Target=FBgn0032858.1 297 553 +
ChrX	stalkie_big_nohaplotig	CDS	3624598	3624739	.	+	2	Parent=FBgn0032858.1.mrna1;Target=FBgn0032858.1 554 695 +
ChrX	stalkie_big_nohaplotig	CDS	3624809	3625499	.	+	1	Parent=FBgn0032858.1.mrna1;Target=FBgn0032858.1 696 1386 +
ChrX	stalkie_big_nohaplotig	mRNA	3669813	3670566	.	-	.	ID=comp88774_c0_seq1.mrna1;geneID=comp88774_c0_seq1.path1;Name=comp88774_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=753;mismatches=1;indels=0;unknowns=0;Target=comp88774_c0_seq1 754 1 .;CDS_Target=comp88774_c0_seq1 389 309 .;locus=RLOC_00000196
ChrX	stalkie_big_nohaplotig	exon	3669813	3670566	99	-	.	Parent=comp88774_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	3670178	3670258	.	-	0	Parent=comp88774_c0_seq1.mrna1
ChrX	gffcl	locus	3632718	3633410	.	+	.	ID=RLOC_00000197;geneIDs=comp151208_c0_seq1.path1;transcripts=comp151208_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3632718	3633410	.	+	.	ID=comp151208_c0_seq1.mrna1;geneID=comp151208_c0_seq1.path1;Name=comp151208_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=689;mismatches=4;indels=0;unknowns=0;Target=comp151208_c0_seq1 693 1 .;CDS_Target=comp151208_c0_seq1 542 423 .;locus=RLOC_00000197
ChrX	stalkie_big_nohaplotig	exon	3632718	3633410	99	+	.	Parent=comp151208_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	3633140	3633259	.	+	0	Parent=comp151208_c0_seq1.mrna1
ChrX	gffcl	locus	3694940	3736146	.	+	.	ID=RLOC_00000198;geneIDs=FBgn0263355.path1;transcripts=FBgn0263355.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3694940	3736146	.	+	.	ID=FBgn0263355.mrna1;geneID=FBgn0263355.path1;Name=FBgn0263355;Dir=sensecoverage=100.0;identity=99.9;matches=911;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000198
ChrX	stalkie_big_nohaplotig	exon	3694940	3695501	100	+	.	Parent=FBgn0263355.mrna1;Target=FBgn0263355 1 562 +
ChrX	stalkie_big_nohaplotig	exon	3735590	3735644	98	+	.	Parent=FBgn0263355.mrna1;Target=FBgn0263355 563 617 +
ChrX	stalkie_big_nohaplotig	exon	3735736	3735817	100	+	.	Parent=FBgn0263355.mrna1;Target=FBgn0263355 618 699 +
ChrX	stalkie_big_nohaplotig	exon	3735934	3736146	100	+	.	Parent=FBgn0263355.mrna1;Target=FBgn0263355 700 912 +
ChrX	stalkie_big_nohaplotig	CDS	3694940	3695501	.	+	0	Parent=FBgn0263355.mrna1;Target=FBgn0263355 1 562 +
ChrX	stalkie_big_nohaplotig	CDS	3735590	3735644	.	+	2	Parent=FBgn0263355.mrna1;Target=FBgn0263355 563 617 +
ChrX	stalkie_big_nohaplotig	CDS	3735736	3735817	.	+	1	Parent=FBgn0263355.mrna1;Target=FBgn0263355 618 699 +
ChrX	stalkie_big_nohaplotig	CDS	3735934	3736146	.	+	0	Parent=FBgn0263355.mrna1;Target=FBgn0263355 700 912 +
ChrX	gffcl	locus	3742147	3743115	.	+	.	ID=RLOC_00000199;geneIDs=comp48505_c0_seq1.path1;transcripts=comp48505_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3742147	3743115	.	+	.	ID=comp48505_c0_seq1.mrna1;geneID=comp48505_c0_seq1.path1;Name=comp48505_c0_seq1;Dir=indeterminatecoverage=97.3;identity=98.9;matches=961;mismatches=2;indels=9;unknowns=0;Target=comp48505_c0_seq1 974 9 .;CDS_Target=comp48505_c0_seq1 585 457 .;locus=RLOC_00000199
ChrX	stalkie_big_nohaplotig	exon	3742147	3743115	98	+	.	Parent=comp48505_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	3742595	3742729	.	+	0	Parent=comp48505_c0_seq1.mrna1
ChrX	gffcl	locus	3749772	3750681	.	-	.	ID=RLOC_00000200;geneIDs=comp151209_c0_seq1.path1;transcripts=comp151209_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3749772	3750681	.	-	.	ID=comp151209_c0_seq1.mrna1;geneID=comp151209_c0_seq1.path1;Name=comp151209_c0_seq1;Dir=indeterminatecoverage=70.7;identity=99.6;matches=907;mismatches=3;indels=1;unknowns=0;Target=comp151209_c0_seq1 911 1 .;CDS_Target=comp151209_c0_seq1 909 784 .;locus=RLOC_00000200
ChrX	stalkie_big_nohaplotig	exon	3749772	3750681	99	-	.	Parent=comp151209_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	3749774	3749899	.	-	0	Parent=comp151209_c0_seq1.mrna1
ChrX	gffcl	locus	3752034	3752369	.	-	.	ID=RLOC_00000201;geneIDs=comp277271_c0_seq1.path1;transcripts=comp277271_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3752034	3752369	.	-	.	ID=comp277271_c0_seq1.mrna1;geneID=comp277271_c0_seq1.path1;Name=comp277271_c0_seq1;Dir=indeterminatecoverage=86.8;identity=100.0;matches=336;mismatches=0;indels=0;unknowns=0;Target=comp277271_c0_seq1 336 1 .;CDS_Target=comp277271_c0_seq1 336 268 .;locus=RLOC_00000201
ChrX	stalkie_big_nohaplotig	exon	3752034	3752369	100	-	.	Parent=comp277271_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	3752034	3752102	.	-	0	Parent=comp277271_c0_seq1.mrna1
ChrX	gffcl	locus	3758477	3759774	.	-	.	ID=RLOC_00000202;geneIDs=FBgn0032445.1.path1;transcripts=FBgn0032445.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3758477	3759774	.	-	.	ID=FBgn0032445.1.mrna1;geneID=FBgn0032445.1.path1;Name=FBgn0032445.1;Dir=sensecoverage=100.0;identity=100.0;matches=726;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000202
ChrX	stalkie_big_nohaplotig	exon	3758477	3758598	100	-	.	Parent=FBgn0032445.1.mrna1;Target=FBgn0032445.1 605 726 +
ChrX	stalkie_big_nohaplotig	exon	3758667	3758752	100	-	.	Parent=FBgn0032445.1.mrna1;Target=FBgn0032445.1 519 604 +
ChrX	stalkie_big_nohaplotig	exon	3758941	3759045	100	-	.	Parent=FBgn0032445.1.mrna1;Target=FBgn0032445.1 414 518 +
ChrX	stalkie_big_nohaplotig	exon	3759106	3759227	100	-	.	Parent=FBgn0032445.1.mrna1;Target=FBgn0032445.1 292 413 +
ChrX	stalkie_big_nohaplotig	exon	3759484	3759774	100	-	.	Parent=FBgn0032445.1.mrna1;Target=FBgn0032445.1 1 291 +
ChrX	stalkie_big_nohaplotig	CDS	3758477	3758598	.	-	2	Parent=FBgn0032445.1.mrna1;Target=FBgn0032445.1 605 726 +
ChrX	stalkie_big_nohaplotig	CDS	3758667	3758752	.	-	1	Parent=FBgn0032445.1.mrna1;Target=FBgn0032445.1 519 604 +
ChrX	stalkie_big_nohaplotig	CDS	3758941	3759045	.	-	1	Parent=FBgn0032445.1.mrna1;Target=FBgn0032445.1 414 518 +
ChrX	stalkie_big_nohaplotig	CDS	3759106	3759227	.	-	0	Parent=FBgn0032445.1.mrna1;Target=FBgn0032445.1 292 413 +
ChrX	stalkie_big_nohaplotig	CDS	3759484	3759774	.	-	0	Parent=FBgn0032445.1.mrna1;Target=FBgn0032445.1 1 291 +
ChrX	gffcl	locus	3765370	3765813	.	+	.	ID=RLOC_00000203;geneIDs=comp150058_c0_seq1.path1;transcripts=comp150058_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3765370	3765813	.	+	.	ID=comp150058_c0_seq1.mrna1;geneID=comp150058_c0_seq1.path1;Name=comp150058_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=443;mismatches=1;indels=0;unknowns=0;Target=comp150058_c0_seq1 444 1 .;CDS_Target=comp150058_c0_seq1 83 3 .;locus=RLOC_00000203
ChrX	stalkie_big_nohaplotig	exon	3765370	3765813	99	+	.	Parent=comp150058_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	3765372	3765452	.	+	0	Parent=comp150058_c0_seq1.mrna1
ChrX	gffcl	locus	3800700	3802283	.	-	.	ID=RLOC_00000205;geneIDs=FBgn0031235.4.path1;transcripts=FBgn0031235.4.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3800700	3802283	.	-	.	ID=FBgn0031235.4.mrna1;geneID=FBgn0031235.4.path1;Name=FBgn0031235.4;Dir=sensecoverage=100.0;identity=99.9;matches=1301;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000205
ChrX	stalkie_big_nohaplotig	exon	3800700	3801433	100	-	.	Parent=FBgn0031235.4.mrna1;Target=FBgn0031235.4 569 1302 +
ChrX	stalkie_big_nohaplotig	exon	3801716	3802283	99	-	.	Parent=FBgn0031235.4.mrna1;Target=FBgn0031235.4 1 568 +
ChrX	stalkie_big_nohaplotig	CDS	3800700	3801433	.	-	2	Parent=FBgn0031235.4.mrna1;Target=FBgn0031235.4 569 1302 +
ChrX	stalkie_big_nohaplotig	CDS	3801716	3802283	.	-	0	Parent=FBgn0031235.4.mrna1;Target=FBgn0031235.4 1 568 +
ChrX	gffcl	locus	3812319	3816520	.	+	.	ID=RLOC_00000206;geneIDs=comp132246_c1_seq1.path1,comp154104_c0_seq1.path1;transcripts=comp132246_c1_seq1.mrna1,comp154104_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3812319	3815733	.	+	.	ID=comp132246_c1_seq1.mrna1;geneID=comp132246_c1_seq1.path1;Name=comp132246_c1_seq1;Dir=antisensecoverage=100.0;identity=99.0;matches=393;mismatches=3;indels=1;unknowns=0;Target=comp132246_c1_seq1 185 265 .;locus=RLOC_00000206
ChrX	stalkie_big_nohaplotig	exon	3812319	3812693	98	+	.	Parent=comp132246_c1_seq1.mrna1;Target=comp132246_c1_seq1 22 397 -
ChrX	stalkie_big_nohaplotig	exon	3815713	3815733	100	+	.	Parent=comp132246_c1_seq1.mrna1;Target=comp132246_c1_seq1 1 21 -
ChrX	stalkie_big_nohaplotig	CDS	3812450	3812530	.	+	0	Parent=comp132246_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3815515	3816520	.	+	.	ID=comp154104_c0_seq1.mrna1;geneID=comp154104_c0_seq1.path1;Name=comp154104_c0_seq1;Dir=sensecoverage=99.9;identity=99.6;matches=936;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000206
ChrX	stalkie_big_nohaplotig	exon	3815515	3815861	100	+	.	Parent=comp154104_c0_seq1.mrna1;Target=comp154104_c0_seq1 1 347 +
ChrX	stalkie_big_nohaplotig	exon	3815928	3816520	99	+	.	Parent=comp154104_c0_seq1.mrna1;Target=comp154104_c0_seq1 348 940 +
ChrX	stalkie_big_nohaplotig	CDS	3815673	3815861	.	+	0	Parent=comp154104_c0_seq1.mrna1;Target=comp154104_c0_seq1 159 347 +
ChrX	stalkie_big_nohaplotig	CDS	3815928	3816296	.	+	0	Parent=comp154104_c0_seq1.mrna1;Target=comp154104_c0_seq1 348 716 +
ChrX	gffcl	locus	3827011	3827411	.	+	.	ID=RLOC_00000207;geneIDs=comp148450_c0_seq1.path1;transcripts=comp148450_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3827011	3827411	.	+	.	ID=comp148450_c0_seq1.mrna1;geneID=comp148450_c0_seq1.path1;Name=comp148450_c0_seq1;Dir=antisensecoverage=99.7;identity=99.7;matches=344;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000207
ChrX	stalkie_big_nohaplotig	exon	3827011	3827085	100	+	.	Parent=comp148450_c0_seq1.mrna1;Target=comp148450_c0_seq1 272 346 -
ChrX	stalkie_big_nohaplotig	exon	3827142	3827411	99	+	.	Parent=comp148450_c0_seq1.mrna1;Target=comp148450_c0_seq1 2 271 -
ChrX	stalkie_big_nohaplotig	CDS	3827012	3827085	.	+	0	Parent=comp148450_c0_seq1.mrna1;Target=comp148450_c0_seq1 272 345 .
ChrX	stalkie_big_nohaplotig	CDS	3827142	3827187	.	+	1	Parent=comp148450_c0_seq1.mrna1;Target=comp148450_c0_seq1 226 271 .
ChrX	gffcl	locus	3828174	3831167	.	-	.	ID=RLOC_00000208;geneIDs=comp146493_c0_seq1.path1;transcripts=comp146493_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3828174	3831167	.	-	.	ID=comp146493_c0_seq1.mrna1;geneID=comp146493_c0_seq1.path1;Name=comp146493_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=1509;mismatches=3;indels=8;unknowns=0;locus=RLOC_00000208
ChrX	stalkie_big_nohaplotig	exon	3828174	3828455	100	-	.	Parent=comp146493_c0_seq1.mrna1;Target=comp146493_c0_seq1 1231 1512 +
ChrX	stalkie_big_nohaplotig	exon	3829930	3831167	99	-	.	Parent=comp146493_c0_seq1.mrna1;Target=comp146493_c0_seq1 1 1230 +
ChrX	stalkie_big_nohaplotig	CDS	3828274	3828455	.	-	2	Parent=comp146493_c0_seq1.mrna1;Target=comp146493_c0_seq1 1231 1412 +
ChrX	stalkie_big_nohaplotig	CDS	3829930	3830008	.	-	0	Parent=comp146493_c0_seq1.mrna1;Target=comp146493_c0_seq1 1152 1230 +
ChrX	gffcl	locus	3832090	3833945	.	+	.	ID=RLOC_00000209;geneIDs=comp135887_c0_seq1.path1;transcripts=comp135887_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3832090	3833945	.	+	.	ID=comp135887_c0_seq1.mrna1;geneID=comp135887_c0_seq1.path1;Name=comp135887_c0_seq1;Dir=antisensecoverage=99.9;identity=99.3;matches=1777;mismatches=7;indels=5;unknowns=0;Target=comp135887_c0_seq1 300 590 .;locus=RLOC_00000209
ChrX	stalkie_big_nohaplotig	exon	3832090	3832674	99	+	.	Parent=comp135887_c0_seq1.mrna1;Target=comp135887_c0_seq1 1200 1784 -
ChrX	stalkie_big_nohaplotig	exon	3832742	3833945	99	+	.	Parent=comp135887_c0_seq1.mrna1;Target=comp135887_c0_seq1 1 1199 -
ChrX	stalkie_big_nohaplotig	CDS	3833351	3833641	.	+	0	Parent=comp135887_c0_seq1.mrna1
ChrX	gffcl	locus	3886754	3887532	.	-	.	ID=RLOC_00000210;geneIDs=comp56296_c0_seq1.path1;transcripts=comp56296_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3886754	3887532	.	-	.	ID=comp56296_c0_seq1.mrna1;geneID=comp56296_c0_seq1.path1;Name=comp56296_c0_seq1;Dir=sensecoverage=98.7;identity=100.0;matches=462;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000210
ChrX	stalkie_big_nohaplotig	exon	3886754	3887116	100	-	.	Parent=comp56296_c0_seq1.mrna1;Target=comp56296_c0_seq1 100 462 +
ChrX	stalkie_big_nohaplotig	exon	3887434	3887532	100	-	.	Parent=comp56296_c0_seq1.mrna1;Target=comp56296_c0_seq1 1 99 +
ChrX	stalkie_big_nohaplotig	CDS	3886847	3887116	.	-	0	Parent=comp56296_c0_seq1.mrna1;Target=comp56296_c0_seq1 100 369 +
ChrX	stalkie_big_nohaplotig	CDS	3887434	3887454	.	-	0	Parent=comp56296_c0_seq1.mrna1;Target=comp56296_c0_seq1 79 99 +
ChrX	gffcl	locus	3889668	3897048	.	+	.	ID=RLOC_00000211;geneIDs=comp149334_c0_seq1.path1;transcripts=comp149334_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3889668	3897048	.	+	.	ID=comp149334_c0_seq1.mrna1;geneID=comp149334_c0_seq1.path1;Name=comp149334_c0_seq1;Dir=antisensecoverage=98.5;identity=98.4;matches=898;mismatches=15;indels=0;unknowns=0;locus=RLOC_00000211
ChrX	stalkie_big_nohaplotig	exon	3889668	3889788	97	+	.	Parent=comp149334_c0_seq1.mrna1;Target=comp149334_c0_seq1 795 915 -
ChrX	stalkie_big_nohaplotig	exon	3896200	3896434	98	+	.	Parent=comp149334_c0_seq1.mrna1;Target=comp149334_c0_seq1 560 794 -
ChrX	stalkie_big_nohaplotig	exon	3896492	3897048	98	+	.	Parent=comp149334_c0_seq1.mrna1;Target=comp149334_c0_seq1 3 559 -
ChrX	stalkie_big_nohaplotig	CDS	3896246	3896434	.	+	0	Parent=comp149334_c0_seq1.mrna1;Target=comp149334_c0_seq1 560 748 .
ChrX	stalkie_big_nohaplotig	CDS	3896492	3896881	.	+	0	Parent=comp149334_c0_seq1.mrna1;Target=comp149334_c0_seq1 170 559 .
ChrX	gffcl	locus	3898691	3899408	.	-	.	ID=RLOC_00000212;geneIDs=AGAP001300.1.path1;transcripts=AGAP001300.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3898691	3899408	.	-	.	ID=AGAP001300.1.mrna1;geneID=AGAP001300.1.path1;Name=AGAP001300.1;Dir=sensecoverage=100.0;identity=100.0;matches=576;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000212
ChrX	stalkie_big_nohaplotig	exon	3898691	3898831	100	-	.	Parent=AGAP001300.1.mrna1;Target=AGAP001300.1 436 576 +
ChrX	stalkie_big_nohaplotig	exon	3898918	3899205	100	-	.	Parent=AGAP001300.1.mrna1;Target=AGAP001300.1 148 435 +
ChrX	stalkie_big_nohaplotig	exon	3899262	3899408	100	-	.	Parent=AGAP001300.1.mrna1;Target=AGAP001300.1 1 147 +
ChrX	stalkie_big_nohaplotig	CDS	3898691	3898831	.	-	0	Parent=AGAP001300.1.mrna1;Target=AGAP001300.1 436 576 +
ChrX	stalkie_big_nohaplotig	CDS	3898918	3899205	.	-	0	Parent=AGAP001300.1.mrna1;Target=AGAP001300.1 148 435 +
ChrX	stalkie_big_nohaplotig	CDS	3899262	3899408	.	-	0	Parent=AGAP001300.1.mrna1;Target=AGAP001300.1 1 147 +
ChrX	gffcl	locus	3925224	3926465	.	+	.	ID=RLOC_00000213;geneIDs=FBgn0037770.1.path1;transcripts=FBgn0037770.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3925224	3926465	.	+	.	ID=FBgn0037770.1.mrna1;geneID=FBgn0037770.1.path1;Name=FBgn0037770.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1237;mismatches=5;indels=0;unknowns=0;Target=FBgn0037770.1 1242 1 .;locus=RLOC_00000213
ChrX	stalkie_big_nohaplotig	exon	3925224	3926465	99	+	.	Parent=FBgn0037770.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	3925224	3926465	.	+	0	Parent=FBgn0037770.1.mrna1
ChrX	gffcl	locus	3929357	3930598	.	-	.	ID=RLOC_00000214;geneIDs=FBgn0037770.1.path2;transcripts=FBgn0037770.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	3929357	3930598	.	-	.	ID=FBgn0037770.1.mrna2;geneID=FBgn0037770.1.path2;Name=FBgn0037770.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1237;mismatches=5;indels=0;unknowns=0;Target=FBgn0037770.1 1242 1 .;locus=RLOC_00000214
ChrX	stalkie_big_nohaplotig	exon	3929357	3930598	99	-	.	Parent=FBgn0037770.1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	3929357	3930598	.	-	0	Parent=FBgn0037770.1.mrna2
ChrX	gffcl	locus	3943107	3944398	.	+	.	ID=RLOC_00000215;geneIDs=comp142352_c1_seq1.path1;transcripts=comp142352_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3943107	3944398	.	+	.	ID=comp142352_c1_seq1.mrna1;geneID=comp142352_c1_seq1.path1;Name=comp142352_c1_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=1043;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000215
ChrX	stalkie_big_nohaplotig	exon	3943107	3943298	100	+	.	Parent=comp142352_c1_seq1.mrna1;Target=comp142352_c1_seq1 1 192 +
ChrX	stalkie_big_nohaplotig	exon	3943358	3943751	100	+	.	Parent=comp142352_c1_seq1.mrna1;Target=comp142352_c1_seq1 193 586 +
ChrX	stalkie_big_nohaplotig	exon	3943806	3943946	100	+	.	Parent=comp142352_c1_seq1.mrna1;Target=comp142352_c1_seq1 587 727 +
ChrX	stalkie_big_nohaplotig	exon	3944028	3944128	100	+	.	Parent=comp142352_c1_seq1.mrna1;Target=comp142352_c1_seq1 728 828 +
ChrX	stalkie_big_nohaplotig	exon	3944183	3944398	99	+	.	Parent=comp142352_c1_seq1.mrna1;Target=comp142352_c1_seq1 829 1044 +
ChrX	stalkie_big_nohaplotig	CDS	3943108	3943298	.	+	0	Parent=comp142352_c1_seq1.mrna1;Target=comp142352_c1_seq1 2 192 +
ChrX	stalkie_big_nohaplotig	CDS	3943358	3943751	.	+	1	Parent=comp142352_c1_seq1.mrna1;Target=comp142352_c1_seq1 193 586 +
ChrX	stalkie_big_nohaplotig	CDS	3943806	3943946	.	+	0	Parent=comp142352_c1_seq1.mrna1;Target=comp142352_c1_seq1 587 727 +
ChrX	stalkie_big_nohaplotig	CDS	3944028	3944128	.	+	0	Parent=comp142352_c1_seq1.mrna1;Target=comp142352_c1_seq1 728 828 +
ChrX	stalkie_big_nohaplotig	CDS	3944183	3944396	.	+	1	Parent=comp142352_c1_seq1.mrna1;Target=comp142352_c1_seq1 829 1042 +
ChrX	gffcl	locus	3952114	3957798	.	+	.	ID=RLOC_00000216;geneIDs=comp156183_c0_seq1.path1;transcripts=comp156183_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3952114	3957798	.	+	.	ID=comp156183_c0_seq1.mrna1;geneID=comp156183_c0_seq1.path1;Name=comp156183_c0_seq1;Dir=sensecoverage=98.7;identity=98.6;matches=961;mismatches=13;indels=1;unknowns=0;locus=RLOC_00000216
ChrX	stalkie_big_nohaplotig	exon	3952114	3952198	87	+	.	Parent=comp156183_c0_seq1.mrna1;Target=comp156183_c0_seq1 1 86 +
ChrX	stalkie_big_nohaplotig	exon	3956845	3957024	100	+	.	Parent=comp156183_c0_seq1.mrna1;Target=comp156183_c0_seq1 87 266 +
ChrX	stalkie_big_nohaplotig	exon	3957090	3957798	99	+	.	Parent=comp156183_c0_seq1.mrna1;Target=comp156183_c0_seq1 267 975 +
ChrX	stalkie_big_nohaplotig	CDS	3956869	3957024	.	+	0	Parent=comp156183_c0_seq1.mrna1;Target=comp156183_c0_seq1 111 266 +
ChrX	stalkie_big_nohaplotig	CDS	3957090	3957452	.	+	0	Parent=comp156183_c0_seq1.mrna1;Target=comp156183_c0_seq1 267 629 +
ChrX	gffcl	locus	3987917	3990863	.	-	.	ID=RLOC_00000218;geneIDs=FBgn0002939.1.path1;transcripts=FBgn0002939.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3987917	3990863	.	-	.	ID=FBgn0002939.1.mrna1;geneID=FBgn0002939.1.path1;Name=FBgn0002939.1;Dir=sensecoverage=100.0;identity=99.9;matches=1504;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000218
ChrX	stalkie_big_nohaplotig	exon	3987917	3988057	100	-	.	Parent=FBgn0002939.1.mrna1;Target=FBgn0002939.1 1366 1506 +
ChrX	stalkie_big_nohaplotig	exon	3988941	3989031	100	-	.	Parent=FBgn0002939.1.mrna1;Target=FBgn0002939.1 1275 1365 +
ChrX	stalkie_big_nohaplotig	exon	3989461	3990272	99	-	.	Parent=FBgn0002939.1.mrna1;Target=FBgn0002939.1 463 1274 +
ChrX	stalkie_big_nohaplotig	exon	3990335	3990637	100	-	.	Parent=FBgn0002939.1.mrna1;Target=FBgn0002939.1 160 462 +
ChrX	stalkie_big_nohaplotig	exon	3990705	3990863	100	-	.	Parent=FBgn0002939.1.mrna1;Target=FBgn0002939.1 1 159 +
ChrX	stalkie_big_nohaplotig	CDS	3987917	3988057	.	-	0	Parent=FBgn0002939.1.mrna1;Target=FBgn0002939.1 1366 1506 +
ChrX	stalkie_big_nohaplotig	CDS	3988941	3989031	.	-	1	Parent=FBgn0002939.1.mrna1;Target=FBgn0002939.1 1275 1365 +
ChrX	stalkie_big_nohaplotig	CDS	3989461	3990272	.	-	0	Parent=FBgn0002939.1.mrna1;Target=FBgn0002939.1 463 1274 +
ChrX	stalkie_big_nohaplotig	CDS	3990335	3990637	.	-	0	Parent=FBgn0002939.1.mrna1;Target=FBgn0002939.1 160 462 +
ChrX	stalkie_big_nohaplotig	CDS	3990705	3990863	.	-	0	Parent=FBgn0002939.1.mrna1;Target=FBgn0002939.1 1 159 +
ChrX	gffcl	locus	3998482	3999390	.	-	.	ID=RLOC_00000219;geneIDs=comp144879_c0_seq1.path1;transcripts=comp144879_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3998482	3999390	.	-	.	ID=comp144879_c0_seq1.mrna1;geneID=comp144879_c0_seq1.path1;Name=comp144879_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=907;mismatches=2;indels=0;unknowns=0;Target=comp144879_c0_seq1 909 1 .;CDS_Target=comp144879_c0_seq1 400 311 .;locus=RLOC_00000219
ChrX	stalkie_big_nohaplotig	exon	3998482	3999390	99	-	.	Parent=comp144879_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	3998991	3999080	.	-	0	Parent=comp144879_c0_seq1.mrna1
ChrX	gffcl	locus	3999733	4003483	.	.	.	ID=RLOC_00000220;geneIDs=FBgn0000120.1.path1,comp119311_c0_seq1.path1,comp1167863_c0_seq1.path1;transcripts=FBgn0000120.1.mrna1,comp119311_c0_seq1.mrna1,comp1167863_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	3999733	4003483	.	-	.	ID=FBgn0000120.1.mrna1;geneID=FBgn0000120.1.path1;Name=FBgn0000120.1;Dir=sensecoverage=100.0;identity=100.0;matches=1116;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000220
ChrX	stalkie_big_nohaplotig	exon	3999733	3999771	100	-	.	Parent=FBgn0000120.1.mrna1;Target=FBgn0000120.1 1078 1116 +
ChrX	stalkie_big_nohaplotig	exon	3999853	3999982	100	-	.	Parent=FBgn0000120.1.mrna1;Target=FBgn0000120.1 948 1077 +
ChrX	stalkie_big_nohaplotig	exon	4000050	4000857	100	-	.	Parent=FBgn0000120.1.mrna1;Target=FBgn0000120.1 140 947 +
ChrX	stalkie_big_nohaplotig	exon	4003345	4003483	100	-	.	Parent=FBgn0000120.1.mrna1;Target=FBgn0000120.1 1 139 +
ChrX	stalkie_big_nohaplotig	CDS	3999733	3999771	.	-	0	Parent=FBgn0000120.1.mrna1;Target=FBgn0000120.1 1078 1116 +
ChrX	stalkie_big_nohaplotig	CDS	3999853	3999982	.	-	1	Parent=FBgn0000120.1.mrna1;Target=FBgn0000120.1 948 1077 +
ChrX	stalkie_big_nohaplotig	CDS	4000050	4000857	.	-	2	Parent=FBgn0000120.1.mrna1;Target=FBgn0000120.1 140 947 +
ChrX	stalkie_big_nohaplotig	CDS	4003345	4003483	.	-	0	Parent=FBgn0000120.1.mrna1;Target=FBgn0000120.1 1 139 +
ChrX	stalkie_big_nohaplotig	mRNA	4000838	4001123	.	+	.	ID=comp119311_c0_seq1.mrna1;geneID=comp119311_c0_seq1.path1;Name=comp119311_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=286;mismatches=0;indels=0;unknowns=0;Target=comp119311_c0_seq1 286 1 .;CDS_Target=comp119311_c0_seq1 286 185 .;locus=RLOC_00000220
ChrX	stalkie_big_nohaplotig	exon	4000838	4001123	100	+	.	Parent=comp119311_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	4001022	4001123	.	+	0	Parent=comp119311_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4003092	4003368	.	+	.	ID=comp1167863_c0_seq1.mrna1;geneID=comp1167863_c0_seq1.path1;Name=comp1167863_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=277;mismatches=0;indels=0;unknowns=0;Target=comp1167863_c0_seq1 277 1 .;CDS_Target=comp1167863_c0_seq1 57 1 .;locus=RLOC_00000220
ChrX	stalkie_big_nohaplotig	exon	4003092	4003368	100	+	.	Parent=comp1167863_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	4003092	4003148	.	+	0	Parent=comp1167863_c0_seq1.mrna1
ChrX	gffcl	locus	4001159	4001962	.	-	.	ID=RLOC_00000221;geneIDs=comp149794_c0_seq1.path1;transcripts=comp149794_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4001159	4001962	.	-	.	ID=comp149794_c0_seq1.mrna1;geneID=comp149794_c0_seq1.path1;Name=comp149794_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.6;matches=801;mismatches=3;indels=0;unknowns=0;Target=comp149794_c0_seq1 812 9 .;CDS_Target=comp149794_c0_seq1 132 55 .;locus=RLOC_00000221
ChrX	stalkie_big_nohaplotig	exon	4001159	4001962	99	-	.	Parent=comp149794_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	4001839	4001916	.	-	0	Parent=comp149794_c0_seq1.mrna1
ChrX	gffcl	locus	4002308	4002846	.	-	.	ID=RLOC_00000222;geneIDs=comp150182_c0_seq1.path1;transcripts=comp150182_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4002308	4002846	.	-	.	ID=comp150182_c0_seq1.mrna1;geneID=comp150182_c0_seq1.path1;Name=comp150182_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.6;matches=537;mismatches=2;indels=0;unknowns=0;Target=comp150182_c0_seq1 541 3 .;CDS_Target=comp150182_c0_seq1 423 277 .;locus=RLOC_00000222
ChrX	stalkie_big_nohaplotig	exon	4002308	4002846	99	-	.	Parent=comp150182_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	4002426	4002572	.	-	0	Parent=comp150182_c0_seq1.mrna1
ChrX	gffcl	locus	4005425	4006003	.	-	.	ID=RLOC_00000223;geneIDs=comp144284_c1_seq1.path1;transcripts=comp144284_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4005425	4006003	.	-	.	ID=comp144284_c1_seq1.mrna1;geneID=comp144284_c1_seq1.path1;Name=comp144284_c1_seq1;Dir=antisensecoverage=96.8;identity=99.0;matches=514;mismatches=4;indels=1;unknowns=0;Target=comp144284_c1_seq1 480 533 .;locus=RLOC_00000223
ChrX	stalkie_big_nohaplotig	exon	4005425	4005673	98	-	.	Parent=comp144284_c1_seq1.mrna1;Target=comp144284_c1_seq1 18 266 -
ChrX	stalkie_big_nohaplotig	exon	4005734	4006003	99	-	.	Parent=comp144284_c1_seq1.mrna1;Target=comp144284_c1_seq1 267 535 -
ChrX	stalkie_big_nohaplotig	CDS	4005947	4006001	.	-	0	Parent=comp144284_c1_seq1.mrna1
ChrX	gffcl	locus	4006022	4009555	.	-	.	ID=RLOC_00000224;geneIDs=comp157083_c0_seq1.path1;transcripts=comp157083_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4006022	4009555	.	-	.	ID=comp157083_c0_seq1.mrna1;geneID=comp157083_c0_seq1.path1;Name=comp157083_c0_seq1;Dir=sensecoverage=100.0;identity=98.4;matches=493;mismatches=8;indels=0;unknowns=0;locus=RLOC_00000224
ChrX	stalkie_big_nohaplotig	exon	4006022	4006112	91	-	.	Parent=comp157083_c0_seq1.mrna1;Target=comp157083_c0_seq1 411 501 +
ChrX	stalkie_big_nohaplotig	exon	4008822	4009122	100	-	.	Parent=comp157083_c0_seq1.mrna1;Target=comp157083_c0_seq1 110 410 +
ChrX	stalkie_big_nohaplotig	exon	4009447	4009555	100	-	.	Parent=comp157083_c0_seq1.mrna1;Target=comp157083_c0_seq1 1 109 +
ChrX	stalkie_big_nohaplotig	CDS	4009052	4009122	.	-	2	Parent=comp157083_c0_seq1.mrna1;Target=comp157083_c0_seq1 110 180 +
ChrX	stalkie_big_nohaplotig	CDS	4009447	4009555	.	-	0	Parent=comp157083_c0_seq1.mrna1;Target=comp157083_c0_seq1 1 109 +
ChrX	gffcl	locus	4012905	4013755	.	-	.	ID=RLOC_00000225;geneIDs=ORF2833.path1;transcripts=ORF2833.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4012905	4013755	.	-	.	ID=ORF2833.mrna1;geneID=ORF2833.path1;Name=ORF2833;Dir=sensecoverage=100.0;identity=100.0;matches=798;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000225
ChrX	stalkie_big_nohaplotig	exon	4012905	4013684	100	-	.	Parent=ORF2833.mrna1;Target=ORF2833 19 798 +
ChrX	stalkie_big_nohaplotig	exon	4013738	4013755	100	-	.	Parent=ORF2833.mrna1;Target=ORF2833 1 18 +
ChrX	stalkie_big_nohaplotig	CDS	4012905	4013684	.	-	0	Parent=ORF2833.mrna1;Target=ORF2833 19 798 +
ChrX	stalkie_big_nohaplotig	CDS	4013738	4013755	.	-	0	Parent=ORF2833.mrna1;Target=ORF2833 1 18 +
ChrX	gffcl	locus	4015010	4015860	.	+	.	ID=RLOC_00000226;geneIDs=ORF2833.path2;transcripts=ORF2833.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	4015010	4015860	.	+	.	ID=ORF2833.mrna2;geneID=ORF2833.path2;Name=ORF2833;Dir=sensecoverage=100.0;identity=100.0;matches=798;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000226
ChrX	stalkie_big_nohaplotig	exon	4015010	4015027	100	+	.	Parent=ORF2833.mrna2;Target=ORF2833 1 18 +
ChrX	stalkie_big_nohaplotig	exon	4015081	4015860	100	+	.	Parent=ORF2833.mrna2;Target=ORF2833 19 798 +
ChrX	stalkie_big_nohaplotig	CDS	4015010	4015027	.	+	0	Parent=ORF2833.mrna2;Target=ORF2833 1 18 +
ChrX	stalkie_big_nohaplotig	CDS	4015081	4015860	.	+	0	Parent=ORF2833.mrna2;Target=ORF2833 19 798 +
ChrX	gffcl	locus	4046634	4049034	.	+	.	ID=RLOC_00000228;geneIDs=comp152102_c0_seq1.path1;transcripts=comp152102_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4046634	4049034	.	+	.	ID=comp152102_c0_seq1.mrna1;geneID=comp152102_c0_seq1.path1;Name=comp152102_c0_seq1;Dir=antisensecoverage=98.3;identity=99.3;matches=1003;mismatches=6;indels=1;unknowns=0;locus=RLOC_00000228
ChrX	stalkie_big_nohaplotig	exon	4046634	4046782	100	+	.	Parent=comp152102_c0_seq1.mrna1;Target=comp152102_c0_seq1 879 1027 -
ChrX	stalkie_big_nohaplotig	exon	4046857	4046908	100	+	.	Parent=comp152102_c0_seq1.mrna1;Target=comp152102_c0_seq1 827 878 -
ChrX	stalkie_big_nohaplotig	exon	4047236	4047550	99	+	.	Parent=comp152102_c0_seq1.mrna1;Target=comp152102_c0_seq1 512 826 -
ChrX	stalkie_big_nohaplotig	exon	4048491	4048626	100	+	.	Parent=comp152102_c0_seq1.mrna1;Target=comp152102_c0_seq1 376 511 -
ChrX	stalkie_big_nohaplotig	exon	4048678	4049034	98	+	.	Parent=comp152102_c0_seq1.mrna1;Target=comp152102_c0_seq1 18 375 -
ChrX	stalkie_big_nohaplotig	CDS	4046699	4046782	.	+	0	Parent=comp152102_c0_seq1.mrna1;Target=comp152102_c0_seq1 879 962 .
ChrX	stalkie_big_nohaplotig	CDS	4046857	4046908	.	+	0	Parent=comp152102_c0_seq1.mrna1;Target=comp152102_c0_seq1 827 878 .
ChrX	stalkie_big_nohaplotig	CDS	4047236	4047309	.	+	2	Parent=comp152102_c0_seq1.mrna1;Target=comp152102_c0_seq1 753 826 .
ChrX	gffcl	locus	4063728	4064887	.	-	.	ID=RLOC_00000229;geneIDs=comp155686_c0_seq1.path1;transcripts=comp155686_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4063728	4064887	.	-	.	ID=comp155686_c0_seq1.mrna1;geneID=comp155686_c0_seq1.path1;Name=comp155686_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.6;matches=1155;mismatches=5;indels=0;unknowns=0;Target=comp155686_c0_seq1 1160 1 .;CDS_Target=comp155686_c0_seq1 973 872 .;locus=RLOC_00000229
ChrX	stalkie_big_nohaplotig	exon	4063728	4064887	99	-	.	Parent=comp155686_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	4063915	4064016	.	-	0	Parent=comp155686_c0_seq1.mrna1
ChrX	gffcl	locus	4066449	4067270	.	+	.	ID=RLOC_00000230;geneIDs=comp149460_c0_seq1.path1;transcripts=comp149460_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4066449	4067270	.	+	.	ID=comp149460_c0_seq1.mrna1;geneID=comp149460_c0_seq1.path1;Name=comp149460_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=815;mismatches=7;indels=0;unknowns=0;Target=comp149460_c0_seq1 822 1 .;CDS_Target=comp149460_c0_seq1 467 276 .;locus=RLOC_00000230
ChrX	stalkie_big_nohaplotig	exon	4066449	4067270	99	+	.	Parent=comp149460_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	4066724	4066915	.	+	0	Parent=comp149460_c0_seq1.mrna1
ChrX	gffcl	locus	4195194	4195899	.	+	.	ID=RLOC_00000232;geneIDs=comp146085_c0_seq1.path1;transcripts=comp146085_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4195194	4195899	.	+	.	ID=comp146085_c0_seq1.mrna1;geneID=comp146085_c0_seq1.path1;Name=comp146085_c0_seq1;Dir=antisensecoverage=95.3;identity=99.8;matches=593;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000232
ChrX	stalkie_big_nohaplotig	exon	4195194	4195468	100	+	.	Parent=comp146085_c0_seq1.mrna1;Target=comp146085_c0_seq1 320 594 -
ChrX	stalkie_big_nohaplotig	exon	4195525	4195613	100	+	.	Parent=comp146085_c0_seq1.mrna1;Target=comp146085_c0_seq1 231 319 -
ChrX	stalkie_big_nohaplotig	exon	4195670	4195899	99	+	.	Parent=comp146085_c0_seq1.mrna1;Target=comp146085_c0_seq1 1 230 -
ChrX	stalkie_big_nohaplotig	CDS	4195259	4195468	.	+	0	Parent=comp146085_c0_seq1.mrna1;Target=comp146085_c0_seq1 320 529 .
ChrX	stalkie_big_nohaplotig	CDS	4195525	4195613	.	+	0	Parent=comp146085_c0_seq1.mrna1;Target=comp146085_c0_seq1 231 319 .
ChrX	stalkie_big_nohaplotig	CDS	4195670	4195715	.	+	1	Parent=comp146085_c0_seq1.mrna1;Target=comp146085_c0_seq1 185 230 .
ChrX	gffcl	locus	4211953	4216561	.	+	.	ID=RLOC_00000233;geneIDs=comp153585_c0_seq1.path1;transcripts=comp153585_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4211953	4216561	.	+	.	ID=comp153585_c0_seq1.mrna1;geneID=comp153585_c0_seq1.path1;Name=comp153585_c0_seq1;Dir=indeterminatecoverage=93.0;identity=87.9;matches=472;mismatches=32;indels=33;unknowns=0;locus=RLOC_00000233
ChrX	stalkie_big_nohaplotig	exon	4211953	4211988	91	+	.	Parent=comp153585_c0_seq1.mrna1;Target=comp153585_c0_seq1 77 42 .
ChrX	stalkie_big_nohaplotig	exon	4212063	4212129	94	+	.	Parent=comp153585_c0_seq1.mrna1;Target=comp153585_c0_seq1 152 86 .
ChrX	stalkie_big_nohaplotig	exon	4212794	4212941	94	+	.	Parent=comp153585_c0_seq1.mrna1;Target=comp153585_c0_seq1 300 153 .
ChrX	stalkie_big_nohaplotig	exon	4216246	4216353	95	+	.	Parent=comp153585_c0_seq1.mrna1;Target=comp153585_c0_seq1 408 301 .
ChrX	stalkie_big_nohaplotig	exon	4216417	4216561	74	+	.	Parent=comp153585_c0_seq1.mrna1;Target=comp153585_c0_seq1 586 409 .
ChrX	stalkie_big_nohaplotig	CDS	4216289	4216353	.	+	0	Parent=comp153585_c0_seq1.mrna1;Target=comp153585_c0_seq1 408 344 .
ChrX	stalkie_big_nohaplotig	CDS	4216417	4216474	.	+	1	Parent=comp153585_c0_seq1.mrna1;Target=comp153585_c0_seq1 466 409 .
ChrX	gffcl	locus	4220730	4221500	.	-	.	ID=RLOC_00000234;geneIDs=comp113619_c0_seq1.path1;transcripts=comp113619_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4220730	4221500	.	-	.	ID=comp113619_c0_seq1.mrna1;geneID=comp113619_c0_seq1.path1;Name=comp113619_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=770;mismatches=1;indels=0;unknowns=0;Target=comp113619_c0_seq1 771 1 .;CDS_Target=comp113619_c0_seq1 769 47 .;locus=RLOC_00000234
ChrX	stalkie_big_nohaplotig	exon	4220730	4221500	99	-	.	Parent=comp113619_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	4220732	4221454	.	-	0	Parent=comp113619_c0_seq1.mrna1
ChrX	gffcl	locus	4257327	4258082	.	-	.	ID=RLOC_00000235;geneIDs=comp151916_c0_seq1.path1;transcripts=comp151916_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4257327	4258082	.	-	.	ID=comp151916_c0_seq1.mrna1;geneID=comp151916_c0_seq1.path1;Name=comp151916_c0_seq1;Dir=sensecoverage=99.3;identity=96.5;matches=667;mismatches=24;indels=0;unknowns=0;locus=RLOC_00000235
ChrX	stalkie_big_nohaplotig	exon	4257327	4257793	97	-	.	Parent=comp151916_c0_seq1.mrna1;Target=comp151916_c0_seq1 229 695 +
ChrX	stalkie_big_nohaplotig	exon	4257859	4258082	94	-	.	Parent=comp151916_c0_seq1.mrna1;Target=comp151916_c0_seq1 5 228 +
ChrX	stalkie_big_nohaplotig	CDS	4257455	4257793	.	-	0	Parent=comp151916_c0_seq1.mrna1;Target=comp151916_c0_seq1 229 567 +
ChrX	stalkie_big_nohaplotig	CDS	4257859	4258080	.	-	0	Parent=comp151916_c0_seq1.mrna1;Target=comp151916_c0_seq1 7 228 +
ChrX	gffcl	locus	4328823	4333750	.	-	.	ID=RLOC_00000236;geneIDs=FBgn0016034.1.path1,comp156632_c0_seq1.path1;transcripts=comp156632_c0_seq1.mrna1,FBgn0016034.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4328823	4333750	.	-	.	ID=comp156632_c0_seq1.mrna1;geneID=comp156632_c0_seq1.path1;Name=comp156632_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=1267;mismatches=6;indels=0;unknowns=0;locus=RLOC_00000236
ChrX	stalkie_big_nohaplotig	exon	4328823	4329000	100	-	.	Parent=comp156632_c0_seq1.mrna1;Target=comp156632_c0_seq1 1 178 -
ChrX	stalkie_big_nohaplotig	exon	4329676	4330055	100	-	.	Parent=comp156632_c0_seq1.mrna1;Target=comp156632_c0_seq1 179 558 -
ChrX	stalkie_big_nohaplotig	exon	4330301	4330450	100	-	.	Parent=comp156632_c0_seq1.mrna1;Target=comp156632_c0_seq1 559 708 -
ChrX	stalkie_big_nohaplotig	exon	4330523	4330709	100	-	.	Parent=comp156632_c0_seq1.mrna1;Target=comp156632_c0_seq1 709 895 -
ChrX	stalkie_big_nohaplotig	exon	4331574	4331758	98	-	.	Parent=comp156632_c0_seq1.mrna1;Target=comp156632_c0_seq1 896 1080 -
ChrX	stalkie_big_nohaplotig	exon	4333558	4333750	97	-	.	Parent=comp156632_c0_seq1.mrna1;Target=comp156632_c0_seq1 1081 1273 -
ChrX	stalkie_big_nohaplotig	CDS	4328824	4329000	.	-	0	Parent=comp156632_c0_seq1.mrna1;Target=comp156632_c0_seq1 2 178 .
ChrX	stalkie_big_nohaplotig	CDS	4329676	4330055	.	-	2	Parent=comp156632_c0_seq1.mrna1;Target=comp156632_c0_seq1 179 558 .
ChrX	stalkie_big_nohaplotig	CDS	4330301	4330450	.	-	2	Parent=comp156632_c0_seq1.mrna1;Target=comp156632_c0_seq1 559 708 .
ChrX	stalkie_big_nohaplotig	CDS	4330523	4330709	.	-	0	Parent=comp156632_c0_seq1.mrna1;Target=comp156632_c0_seq1 709 895 .
ChrX	stalkie_big_nohaplotig	CDS	4331574	4331702	.	-	0	Parent=comp156632_c0_seq1.mrna1;Target=comp156632_c0_seq1 896 1024 .
ChrX	stalkie_big_nohaplotig	mRNA	4328824	4331834	.	-	.	ID=FBgn0016034.1.mrna1;geneID=FBgn0016034.1.path1;Name=FBgn0016034.1;Dir=sensecoverage=100.0;identity=99.8;matches=1153;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000236
ChrX	stalkie_big_nohaplotig	exon	4328824	4329000	100	-	.	Parent=FBgn0016034.1.mrna1;Target=FBgn0016034.1 979 1155 +
ChrX	stalkie_big_nohaplotig	exon	4329676	4330055	100	-	.	Parent=FBgn0016034.1.mrna1;Target=FBgn0016034.1 599 978 +
ChrX	stalkie_big_nohaplotig	exon	4330301	4330450	100	-	.	Parent=FBgn0016034.1.mrna1;Target=FBgn0016034.1 449 598 +
ChrX	stalkie_big_nohaplotig	exon	4330523	4330709	100	-	.	Parent=FBgn0016034.1.mrna1;Target=FBgn0016034.1 262 448 +
ChrX	stalkie_big_nohaplotig	exon	4331574	4331834	99	-	.	Parent=FBgn0016034.1.mrna1;Target=FBgn0016034.1 1 261 +
ChrX	stalkie_big_nohaplotig	CDS	4328824	4329000	.	-	0	Parent=FBgn0016034.1.mrna1;Target=FBgn0016034.1 979 1155 +
ChrX	stalkie_big_nohaplotig	CDS	4329676	4330055	.	-	2	Parent=FBgn0016034.1.mrna1;Target=FBgn0016034.1 599 978 +
ChrX	stalkie_big_nohaplotig	CDS	4330301	4330450	.	-	2	Parent=FBgn0016034.1.mrna1;Target=FBgn0016034.1 449 598 +
ChrX	stalkie_big_nohaplotig	CDS	4330523	4330709	.	-	0	Parent=FBgn0016034.1.mrna1;Target=FBgn0016034.1 262 448 +
ChrX	stalkie_big_nohaplotig	CDS	4331574	4331834	.	-	0	Parent=FBgn0016034.1.mrna1;Target=FBgn0016034.1 1 261 +
ChrX	gffcl	locus	4347959	4348386	.	+	.	ID=RLOC_00000237;geneIDs=comp138307_c2_seq1.path1;transcripts=comp138307_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4347959	4348386	.	+	.	ID=comp138307_c2_seq1.mrna1;geneID=comp138307_c2_seq1.path1;Name=comp138307_c2_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=428;mismatches=0;indels=0;unknowns=0;Target=comp138307_c2_seq1 428 1 .;CDS_Target=comp138307_c2_seq1 428 3 .;locus=RLOC_00000237
ChrX	stalkie_big_nohaplotig	exon	4347959	4348386	100	+	.	Parent=comp138307_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	4347961	4348386	.	+	0	Parent=comp138307_c2_seq1.mrna1
ChrX	gffcl	locus	4359106	4360427	.	-	.	ID=RLOC_00000238;geneIDs=ORF2445.path1;transcripts=ORF2445.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4359106	4360427	.	-	.	ID=ORF2445.mrna1;geneID=ORF2445.path1;Name=ORF2445;Dir=sensecoverage=100.0;identity=99.5;matches=854;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000238
ChrX	stalkie_big_nohaplotig	exon	4359106	4359885	99	-	.	Parent=ORF2445.mrna1;Target=ORF2445 79 858 +
ChrX	stalkie_big_nohaplotig	exon	4360350	4360427	98	-	.	Parent=ORF2445.mrna1;Target=ORF2445 1 78 +
ChrX	stalkie_big_nohaplotig	CDS	4359106	4359885	.	-	0	Parent=ORF2445.mrna1;Target=ORF2445 79 858 +
ChrX	stalkie_big_nohaplotig	CDS	4360350	4360427	.	-	0	Parent=ORF2445.mrna1;Target=ORF2445 1 78 +
ChrX	gffcl	locus	4362110	4362841	.	-	.	ID=RLOC_00000239;geneIDs=comp55367_c0_seq1.path1;transcripts=comp55367_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4362110	4362841	.	-	.	ID=comp55367_c0_seq1.mrna1;geneID=comp55367_c0_seq1.path1;Name=comp55367_c0_seq1;Dir=antisensecoverage=97.9;identity=99.2;matches=615;mismatches=5;indels=0;unknowns=0;locus=RLOC_00000239
ChrX	stalkie_big_nohaplotig	exon	4362110	4362326	99	-	.	Parent=comp55367_c0_seq1.mrna1;Target=comp55367_c0_seq1 14 230 -
ChrX	stalkie_big_nohaplotig	exon	4362383	4362471	98	-	.	Parent=comp55367_c0_seq1.mrna1;Target=comp55367_c0_seq1 231 319 -
ChrX	stalkie_big_nohaplotig	exon	4362528	4362841	99	-	.	Parent=comp55367_c0_seq1.mrna1;Target=comp55367_c0_seq1 320 633 -
ChrX	stalkie_big_nohaplotig	CDS	4362293	4362326	.	-	1	Parent=comp55367_c0_seq1.mrna1;Target=comp55367_c0_seq1 197 230 .
ChrX	stalkie_big_nohaplotig	CDS	4362383	4362471	.	-	0	Parent=comp55367_c0_seq1.mrna1;Target=comp55367_c0_seq1 231 319 .
ChrX	stalkie_big_nohaplotig	CDS	4362528	4362764	.	-	0	Parent=comp55367_c0_seq1.mrna1;Target=comp55367_c0_seq1 320 556 .
ChrX	gffcl	locus	4366172	4366532	.	-	.	ID=RLOC_00000240;geneIDs=comp146184_c0_seq1.path1;transcripts=comp146184_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4366172	4366532	.	-	.	ID=comp146184_c0_seq1.mrna1;geneID=comp146184_c0_seq1.path1;Name=comp146184_c0_seq1;Dir=sensecoverage=99.4;identity=98.7;matches=302;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000240
ChrX	stalkie_big_nohaplotig	exon	4366172	4366247	100	-	.	Parent=comp146184_c0_seq1.mrna1;Target=comp146184_c0_seq1 232 307 +
ChrX	stalkie_big_nohaplotig	exon	4366303	4366532	98	-	.	Parent=comp146184_c0_seq1.mrna1;Target=comp146184_c0_seq1 2 231 +
ChrX	stalkie_big_nohaplotig	CDS	4366233	4366247	.	-	0	Parent=comp146184_c0_seq1.mrna1;Target=comp146184_c0_seq1 232 246 +
ChrX	stalkie_big_nohaplotig	CDS	4366303	4366398	.	-	0	Parent=comp146184_c0_seq1.mrna1;Target=comp146184_c0_seq1 136 231 +
ChrX	gffcl	locus	4376150	4377037	.	+	.	ID=RLOC_00000241;geneIDs=ORF2260.path1;transcripts=ORF2260.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4376150	4377037	.	+	.	ID=ORF2260.mrna1;geneID=ORF2260.path1;Name=ORF2260;Dir=indeterminatecoverage=100.0;identity=100.0;matches=888;mismatches=0;indels=0;unknowns=0;Target=ORF2260 888 1 .;locus=RLOC_00000241
ChrX	stalkie_big_nohaplotig	exon	4376150	4377037	100	+	.	Parent=ORF2260.mrna1
ChrX	stalkie_big_nohaplotig	CDS	4376150	4377037	.	+	0	Parent=ORF2260.mrna1
ChrX	gffcl	locus	4402673	4404061	.	-	.	ID=RLOC_00000243;geneIDs=ORF850.path1;transcripts=ORF850.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4402673	4404061	.	-	.	ID=ORF850.mrna1;geneID=ORF850.path1;Name=ORF850;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1385;mismatches=4;indels=0;unknowns=0;Target=ORF850 1389 1 .;CDS_Target=ORF850 1389 109 .;locus=RLOC_00000243
ChrX	stalkie_big_nohaplotig	exon	4402673	4404061	99	-	.	Parent=ORF850.mrna1
ChrX	stalkie_big_nohaplotig	CDS	4402673	4403953	.	-	0	Parent=ORF850.mrna1
ChrX	gffcl	locus	4462753	4464112	.	+	.	ID=RLOC_00000244;geneIDs=comp155978_c0_seq1.path1;transcripts=comp155978_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4462753	4464112	.	+	.	ID=comp155978_c0_seq1.mrna1;geneID=comp155978_c0_seq1.path1;Name=comp155978_c0_seq1;Dir=indeterminatecoverage=96.2;identity=99.6;matches=1354;mismatches=6;indels=0;unknowns=0;Target=comp155978_c0_seq1 1360 1 .;CDS_Target=comp155978_c0_seq1 1334 1233 .;locus=RLOC_00000244
ChrX	stalkie_big_nohaplotig	exon	4462753	4464112	99	+	.	Parent=comp155978_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	4463985	4464086	.	+	0	Parent=comp155978_c0_seq1.mrna1
ChrX	gffcl	locus	4464262	4464828	.	+	.	ID=RLOC_00000245;geneIDs=comp116156_c0_seq1.path1;transcripts=comp116156_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4464262	4464828	.	+	.	ID=comp116156_c0_seq1.mrna1;geneID=comp116156_c0_seq1.path1;Name=comp116156_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=566;mismatches=1;indels=0;unknowns=0;Target=comp116156_c0_seq1 567 1 .;CDS_Target=comp116156_c0_seq1 566 102 .;locus=RLOC_00000245
ChrX	stalkie_big_nohaplotig	exon	4464262	4464828	99	+	.	Parent=comp116156_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	4464363	4464827	.	+	0	Parent=comp116156_c0_seq1.mrna1
ChrX	gffcl	locus	4465641	4478378	.	-	.	ID=RLOC_00000246;geneIDs=ORF879.path1;transcripts=ORF879.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4465641	4478378	.	-	.	ID=ORF879.mrna1;geneID=ORF879.path1;Name=ORF879;Dir=sensecoverage=100.0;identity=99.9;matches=1366;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000246
ChrX	stalkie_big_nohaplotig	exon	4465641	4466729	99	-	.	Parent=ORF879.mrna1;Target=ORF879 280 1368 +
ChrX	stalkie_big_nohaplotig	exon	4478100	4478378	100	-	.	Parent=ORF879.mrna1;Target=ORF879 1 279 +
ChrX	stalkie_big_nohaplotig	CDS	4465641	4466729	.	-	0	Parent=ORF879.mrna1;Target=ORF879 280 1368 +
ChrX	stalkie_big_nohaplotig	CDS	4478100	4478378	.	-	0	Parent=ORF879.mrna1;Target=ORF879 1 279 +
ChrX	gffcl	locus	4472071	4476980	.	+	.	ID=RLOC_00000247;geneIDs=FBgn0023096.path1;transcripts=FBgn0023096.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4472071	4476980	.	+	.	ID=FBgn0023096.mrna1;geneID=FBgn0023096.path1;Name=FBgn0023096;Dir=sensecoverage=100.0;identity=99.8;matches=3498;mismatches=6;indels=0;unknowns=0;locus=RLOC_00000247
ChrX	stalkie_big_nohaplotig	exon	4472071	4472397	99	+	.	Parent=FBgn0023096.mrna1;Target=FBgn0023096 1 327 +
ChrX	stalkie_big_nohaplotig	exon	4472458	4473431	99	+	.	Parent=FBgn0023096.mrna1;Target=FBgn0023096 328 1301 +
ChrX	stalkie_big_nohaplotig	exon	4473499	4474820	99	+	.	Parent=FBgn0023096.mrna1;Target=FBgn0023096 1302 2623 +
ChrX	stalkie_big_nohaplotig	exon	4476100	4476980	100	+	.	Parent=FBgn0023096.mrna1;Target=FBgn0023096 2624 3504 +
ChrX	stalkie_big_nohaplotig	CDS	4472071	4472397	.	+	0	Parent=FBgn0023096.mrna1;Target=FBgn0023096 1 327 +
ChrX	stalkie_big_nohaplotig	CDS	4472458	4473431	.	+	0	Parent=FBgn0023096.mrna1;Target=FBgn0023096 328 1301 +
ChrX	stalkie_big_nohaplotig	CDS	4473499	4474820	.	+	1	Parent=FBgn0023096.mrna1;Target=FBgn0023096 1302 2623 +
ChrX	stalkie_big_nohaplotig	CDS	4476100	4476980	.	+	2	Parent=FBgn0023096.mrna1;Target=FBgn0023096 2624 3504 +
ChrX	gffcl	locus	4493959	4496389	.	-	.	ID=RLOC_00000248;geneIDs=FBgn0005411.2.path1;transcripts=FBgn0005411.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4493959	4496389	.	-	.	ID=FBgn0005411.2.mrna1;geneID=FBgn0005411.2.path1;Name=FBgn0005411.2;Dir=sensecoverage=100.0;identity=96.8;matches=1191;mismatches=39;indels=0;unknowns=0;locus=RLOC_00000248
ChrX	stalkie_big_nohaplotig	exon	4493959	4494297	92	-	.	Parent=FBgn0005411.2.mrna1;Target=FBgn0005411.2 892 1230 +
ChrX	stalkie_big_nohaplotig	exon	4494361	4494477	90	-	.	Parent=FBgn0005411.2.mrna1;Target=FBgn0005411.2 775 891 +
ChrX	stalkie_big_nohaplotig	exon	4494534	4494656	98	-	.	Parent=FBgn0005411.2.mrna1;Target=FBgn0005411.2 652 774 +
ChrX	stalkie_big_nohaplotig	exon	4495500	4495588	100	-	.	Parent=FBgn0005411.2.mrna1;Target=FBgn0005411.2 563 651 +
ChrX	stalkie_big_nohaplotig	exon	4495651	4496193	99	-	.	Parent=FBgn0005411.2.mrna1;Target=FBgn0005411.2 20 562 +
ChrX	stalkie_big_nohaplotig	exon	4496371	4496389	100	-	.	Parent=FBgn0005411.2.mrna1;Target=FBgn0005411.2 1 19 +
ChrX	stalkie_big_nohaplotig	CDS	4493959	4494297	.	-	0	Parent=FBgn0005411.2.mrna1;Target=FBgn0005411.2 892 1230 +
ChrX	stalkie_big_nohaplotig	CDS	4494361	4494477	.	-	0	Parent=FBgn0005411.2.mrna1;Target=FBgn0005411.2 775 891 +
ChrX	stalkie_big_nohaplotig	CDS	4494534	4494656	.	-	0	Parent=FBgn0005411.2.mrna1;Target=FBgn0005411.2 652 774 +
ChrX	stalkie_big_nohaplotig	CDS	4495500	4495588	.	-	2	Parent=FBgn0005411.2.mrna1;Target=FBgn0005411.2 563 651 +
ChrX	stalkie_big_nohaplotig	CDS	4495651	4496193	.	-	2	Parent=FBgn0005411.2.mrna1;Target=FBgn0005411.2 20 562 +
ChrX	stalkie_big_nohaplotig	CDS	4496371	4496389	.	-	0	Parent=FBgn0005411.2.mrna1;Target=FBgn0005411.2 1 19 +
ChrX	gffcl	locus	4505009	4505904	.	+	.	ID=RLOC_00000249;geneIDs=comp60599_c0_seq1.path1;transcripts=comp60599_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4505009	4505904	.	+	.	ID=comp60599_c0_seq1.mrna1;geneID=comp60599_c0_seq1.path1;Name=comp60599_c0_seq1;Dir=sensecoverage=98.2;identity=99.7;matches=663;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000249
ChrX	stalkie_big_nohaplotig	exon	4505009	4505185	99	+	.	Parent=comp60599_c0_seq1.mrna1;Target=comp60599_c0_seq1 1 177 +
ChrX	stalkie_big_nohaplotig	exon	4505246	4505332	98	+	.	Parent=comp60599_c0_seq1.mrna1;Target=comp60599_c0_seq1 178 264 +
ChrX	stalkie_big_nohaplotig	exon	4505416	4505599	100	+	.	Parent=comp60599_c0_seq1.mrna1;Target=comp60599_c0_seq1 265 448 +
ChrX	stalkie_big_nohaplotig	exon	4505688	4505904	100	+	.	Parent=comp60599_c0_seq1.mrna1;Target=comp60599_c0_seq1 449 665 +
ChrX	stalkie_big_nohaplotig	CDS	4505148	4505185	.	+	0	Parent=comp60599_c0_seq1.mrna1;Target=comp60599_c0_seq1 140 177 +
ChrX	stalkie_big_nohaplotig	CDS	4505246	4505332	.	+	1	Parent=comp60599_c0_seq1.mrna1;Target=comp60599_c0_seq1 178 264 +
ChrX	stalkie_big_nohaplotig	CDS	4505416	4505599	.	+	1	Parent=comp60599_c0_seq1.mrna1;Target=comp60599_c0_seq1 265 448 +
ChrX	stalkie_big_nohaplotig	CDS	4505688	4505714	.	+	0	Parent=comp60599_c0_seq1.mrna1;Target=comp60599_c0_seq1 449 475 +
ChrX	gffcl	locus	4507202	4508148	.	+	.	ID=RLOC_00000250;geneIDs=comp156827_c1_seq1.path1;transcripts=comp156827_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4507202	4508148	.	+	.	ID=comp156827_c1_seq1.mrna1;geneID=comp156827_c1_seq1.path1;Name=comp156827_c1_seq1;Dir=antisensecoverage=97.2;identity=100.0;matches=720;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000250
ChrX	stalkie_big_nohaplotig	exon	4507202	4507436	100	+	.	Parent=comp156827_c1_seq1.mrna1;Target=comp156827_c1_seq1 498 732 -
ChrX	stalkie_big_nohaplotig	exon	4507513	4507599	100	+	.	Parent=comp156827_c1_seq1.mrna1;Target=comp156827_c1_seq1 411 497 -
ChrX	stalkie_big_nohaplotig	exon	4507665	4507848	100	+	.	Parent=comp156827_c1_seq1.mrna1;Target=comp156827_c1_seq1 227 410 -
ChrX	stalkie_big_nohaplotig	exon	4507935	4508148	100	+	.	Parent=comp156827_c1_seq1.mrna1;Target=comp156827_c1_seq1 13 226 -
ChrX	stalkie_big_nohaplotig	CDS	4507396	4507436	.	+	0	Parent=comp156827_c1_seq1.mrna1;Target=comp156827_c1_seq1 498 538 .
ChrX	stalkie_big_nohaplotig	CDS	4507513	4507599	.	+	1	Parent=comp156827_c1_seq1.mrna1;Target=comp156827_c1_seq1 411 497 .
ChrX	stalkie_big_nohaplotig	CDS	4507665	4507848	.	+	1	Parent=comp156827_c1_seq1.mrna1;Target=comp156827_c1_seq1 227 410 .
ChrX	stalkie_big_nohaplotig	CDS	4507935	4507961	.	+	0	Parent=comp156827_c1_seq1.mrna1;Target=comp156827_c1_seq1 200 226 .
ChrX	gffcl	locus	4542592	4543168	.	-	.	ID=RLOC_00000251;geneIDs=comp134626_c3_seq1.path1;transcripts=comp134626_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4542592	4543168	.	-	.	ID=comp134626_c3_seq1.mrna1;geneID=comp134626_c3_seq1.path1;Name=comp134626_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=574;mismatches=3;indels=0;unknowns=0;Target=comp134626_c3_seq1 577 1 .;CDS_Target=comp134626_c3_seq1 146 3 .;locus=RLOC_00000251
ChrX	stalkie_big_nohaplotig	exon	4542592	4543168	99	-	.	Parent=comp134626_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	4543023	4543166	.	-	0	Parent=comp134626_c3_seq1.mrna1
ChrX	gffcl	locus	4544971	4553076	.	+	.	ID=RLOC_00000252;geneIDs=comp151570_c2_seq1.path1;transcripts=comp151570_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4544971	4553076	.	+	.	ID=comp151570_c2_seq1.mrna1;geneID=comp151570_c2_seq1.path1;Name=comp151570_c2_seq1;Dir=antisensecoverage=99.9;identity=99.1;matches=1381;mismatches=12;indels=0;unknowns=0;Target=comp151570_c2_seq1 434 1108 .;locus=RLOC_00000252
ChrX	stalkie_big_nohaplotig	exon	4544971	4545235	99	+	.	Parent=comp151570_c2_seq1.mrna1;Target=comp151570_c2_seq1 1130 1394 -
ChrX	stalkie_big_nohaplotig	exon	4551949	4553076	99	+	.	Parent=comp151570_c2_seq1.mrna1;Target=comp151570_c2_seq1 2 1129 -
ChrX	stalkie_big_nohaplotig	CDS	4551970	4552644	.	+	0	Parent=comp151570_c2_seq1.mrna1
ChrX	gffcl	locus	4550119	4550387	.	+	.	ID=RLOC_00000253;geneIDs=comp136589_c0_seq1.path1;transcripts=comp136589_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4550119	4550387	.	+	.	ID=comp136589_c0_seq1.mrna1;geneID=comp136589_c0_seq1.path1;Name=comp136589_c0_seq1;Dir=indeterminatecoverage=90.0;identity=99.6;matches=268;mismatches=1;indels=0;unknowns=0;Target=comp136589_c0_seq1 277 9 .;CDS_Target=comp136589_c0_seq1 120 10 .;locus=RLOC_00000253
ChrX	stalkie_big_nohaplotig	exon	4550119	4550387	99	+	.	Parent=comp136589_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	4550120	4550230	.	+	0	Parent=comp136589_c0_seq1.mrna1
ChrX	gffcl	locus	4586027	4588115	.	-	.	ID=RLOC_00000254;geneIDs=comp162789_c9_seq1.path1;transcripts=comp162789_c9_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4586027	4588115	.	-	.	ID=comp162789_c9_seq1.mrna1;geneID=comp162789_c9_seq1.path1;Name=comp162789_c9_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=2085;mismatches=4;indels=0;unknowns=0;Target=comp162789_c9_seq1 2090 2 .;CDS_Target=comp162789_c9_seq1 1754 741 .;locus=RLOC_00000254
ChrX	stalkie_big_nohaplotig	exon	4586027	4588115	99	-	.	Parent=comp162789_c9_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	4586363	4587376	.	-	0	Parent=comp162789_c9_seq1.mrna1
ChrX	gffcl	locus	4649076	4649534	.	+	.	ID=RLOC_00000255;geneIDs=comp99714_c0_seq1.path1;transcripts=comp99714_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4649076	4649534	.	+	.	ID=comp99714_c0_seq1.mrna1;geneID=comp99714_c0_seq1.path1;Name=comp99714_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=389;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000255
ChrX	stalkie_big_nohaplotig	exon	4649076	4649263	99	+	.	Parent=comp99714_c0_seq1.mrna1;Target=comp99714_c0_seq1 1 188 +
ChrX	stalkie_big_nohaplotig	exon	4649333	4649534	100	+	.	Parent=comp99714_c0_seq1.mrna1;Target=comp99714_c0_seq1 189 390 +
ChrX	stalkie_big_nohaplotig	CDS	4649168	4649263	.	+	0	Parent=comp99714_c0_seq1.mrna1;Target=comp99714_c0_seq1 93 188 +
ChrX	stalkie_big_nohaplotig	CDS	4649333	4649374	.	+	0	Parent=comp99714_c0_seq1.mrna1;Target=comp99714_c0_seq1 189 230 +
ChrX	gffcl	locus	4680946	4682252	.	-	.	ID=RLOC_00000256;geneIDs=comp158020_c0_seq1.path1;transcripts=comp158020_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4680946	4682252	.	-	.	ID=comp158020_c0_seq1.mrna1;geneID=comp158020_c0_seq1.path1;Name=comp158020_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.8;matches=1298;mismatches=6;indels=10;unknowns=0;Target=comp158020_c0_seq1 1312 2 .;CDS_Target=comp158020_c0_seq1 745 611 .;locus=RLOC_00000256
ChrX	stalkie_big_nohaplotig	exon	4680946	4682252	98	-	.	Parent=comp158020_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	4681513	4681647	.	-	0	Parent=comp158020_c0_seq1.mrna1
ChrX	gffcl	locus	4721654	4722198	.	+	.	ID=RLOC_00000257;geneIDs=comp143830_c0_seq1.path1;transcripts=comp143830_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4721654	4722198	.	+	.	ID=comp143830_c0_seq1.mrna1;geneID=comp143830_c0_seq1.path1;Name=comp143830_c0_seq1;Dir=sensecoverage=99.8;identity=99.4;matches=479;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000257
ChrX	stalkie_big_nohaplotig	exon	4721654	4721833	99	+	.	Parent=comp143830_c0_seq1.mrna1;Target=comp143830_c0_seq1 1 180 +
ChrX	stalkie_big_nohaplotig	exon	4721897	4722198	99	+	.	Parent=comp143830_c0_seq1.mrna1;Target=comp143830_c0_seq1 181 482 +
ChrX	stalkie_big_nohaplotig	CDS	4721738	4721833	.	+	0	Parent=comp143830_c0_seq1.mrna1;Target=comp143830_c0_seq1 85 180 +
ChrX	stalkie_big_nohaplotig	CDS	4721897	4722046	.	+	0	Parent=comp143830_c0_seq1.mrna1;Target=comp143830_c0_seq1 181 330 +
ChrX	gffcl	locus	4728458	4729008	.	+	.	ID=RLOC_00000258;geneIDs=FBgn0033551.1.path1;transcripts=FBgn0033551.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4728458	4729008	.	+	.	ID=FBgn0033551.1.mrna1;geneID=FBgn0033551.1.path1;Name=FBgn0033551.1;Dir=indeterminatecoverage=98.7;identity=100.0;matches=551;mismatches=0;indels=0;unknowns=0;Target=FBgn0033551.1 558 8 .;CDS_Target=FBgn0033551.1 558 10 .;locus=RLOC_00000258
ChrX	stalkie_big_nohaplotig	exon	4728458	4729008	100	+	.	Parent=FBgn0033551.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	4728460	4729008	.	+	0	Parent=FBgn0033551.1.mrna1
ChrX	gffcl	locus	4768272	4776901	.	-	.	ID=RLOC_00000260;geneIDs=comp155998_c2_seq1.path1;transcripts=comp155998_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4768272	4776901	.	-	.	ID=comp155998_c2_seq1.mrna1;geneID=comp155998_c2_seq1.path1;Name=comp155998_c2_seq1;Dir=sensecoverage=99.9;identity=92.7;matches=1305;mismatches=24;indels=79;unknowns=0;Target=comp155998_c2_seq1 1173 1343 +;locus=RLOC_00000260
ChrX	stalkie_big_nohaplotig	exon	4768272	4769102	88	-	.	Parent=comp155998_c2_seq1.mrna1;Target=comp155998_c2_seq1 563 1344 +
ChrX	stalkie_big_nohaplotig	exon	4769880	4770126	99	-	.	Parent=comp155998_c2_seq1.mrna1;Target=comp155998_c2_seq1 316 562 +
ChrX	stalkie_big_nohaplotig	exon	4776587	4776901	100	-	.	Parent=comp155998_c2_seq1.mrna1;Target=comp155998_c2_seq1 1 315 +
ChrX	stalkie_big_nohaplotig	CDS	4768273	4768448	.	-	0	Parent=comp155998_c2_seq1.mrna1
ChrX	gffcl	locus	4780094	4781674	.	-	.	ID=RLOC_00000261;geneIDs=comp142697_c0_seq1.path1;transcripts=comp142697_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4780094	4781674	.	-	.	ID=comp142697_c0_seq1.mrna1;geneID=comp142697_c0_seq1.path1;Name=comp142697_c0_seq1;Dir=antisensecoverage=99.6;identity=96.4;matches=745;mismatches=11;indels=17;unknowns=0;locus=RLOC_00000261
ChrX	stalkie_big_nohaplotig	exon	4780094	4780590	94	-	.	Parent=comp142697_c0_seq1.mrna1;Target=comp142697_c0_seq1 4 483 -
ChrX	stalkie_big_nohaplotig	exon	4780658	4780877	99	-	.	Parent=comp142697_c0_seq1.mrna1;Target=comp142697_c0_seq1 484 703 -
ChrX	stalkie_big_nohaplotig	exon	4781619	4781674	100	-	.	Parent=comp142697_c0_seq1.mrna1;Target=comp142697_c0_seq1 704 759 -
ChrX	stalkie_big_nohaplotig	CDS	4780426	4780590	.	-	0	Parent=comp142697_c0_seq1.mrna1;Target=comp142697_c0_seq1 319 483 .
ChrX	stalkie_big_nohaplotig	CDS	4780658	4780774	.	-	0	Parent=comp142697_c0_seq1.mrna1;Target=comp142697_c0_seq1 484 600 .
ChrX	gffcl	locus	4791814	4792139	.	-	.	ID=RLOC_00000262;geneIDs=comp118400_c0_seq1.path1;transcripts=comp118400_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4791814	4792139	.	-	.	ID=comp118400_c0_seq1.mrna1;geneID=comp118400_c0_seq1.path1;Name=comp118400_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=266;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000262
ChrX	stalkie_big_nohaplotig	exon	4791814	4791944	99	-	.	Parent=comp118400_c0_seq1.mrna1;Target=comp118400_c0_seq1 137 267 +
ChrX	stalkie_big_nohaplotig	exon	4792004	4792139	100	-	.	Parent=comp118400_c0_seq1.mrna1;Target=comp118400_c0_seq1 1 136 +
ChrX	stalkie_big_nohaplotig	CDS	4791879	4791944	.	-	0	Parent=comp118400_c0_seq1.mrna1;Target=comp118400_c0_seq1 137 202 +
ChrX	stalkie_big_nohaplotig	CDS	4792004	4792096	.	-	0	Parent=comp118400_c0_seq1.mrna1;Target=comp118400_c0_seq1 44 136 +
ChrX	gffcl	locus	4797356	4798354	.	+	.	ID=RLOC_00000263;geneIDs=comp149964_c0_seq1.path1;transcripts=comp149964_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4797356	4798354	.	+	.	ID=comp149964_c0_seq1.mrna1;geneID=comp149964_c0_seq1.path1;Name=comp149964_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=983;mismatches=16;indels=1;unknowns=0;Target=comp149964_c0_seq1 1000 1 .;CDS_Target=comp149964_c0_seq1 215 3 .;locus=RLOC_00000263
ChrX	stalkie_big_nohaplotig	exon	4797356	4798354	98	+	.	Parent=comp149964_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	4797358	4797570	.	+	0	Parent=comp149964_c0_seq1.mrna1
ChrX	gffcl	locus	4806335	4806682	.	+	.	ID=RLOC_00000264;geneIDs=comp191381_c0_seq1.path1;transcripts=comp191381_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4806335	4806682	.	+	.	ID=comp191381_c0_seq1.mrna1;geneID=comp191381_c0_seq1.path1;Name=comp191381_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=348;mismatches=0;indels=0;unknowns=0;Target=comp191381_c0_seq1 349 2 .;CDS_Target=comp191381_c0_seq1 291 208 .;locus=RLOC_00000264
ChrX	stalkie_big_nohaplotig	exon	4806335	4806682	100	+	.	Parent=comp191381_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	4806541	4806624	.	+	0	Parent=comp191381_c0_seq1.mrna1
ChrX	gffcl	locus	4807958	4868248	.	-	.	ID=RLOC_00000265;geneIDs=FBgn0262018.1.path1;transcripts=FBgn0262018.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4807958	4868248	.	-	.	ID=FBgn0262018.1.mrna1;geneID=FBgn0262018.1.path1;Name=FBgn0262018.1;Dir=sensecoverage=97.3;identity=99.8;matches=5059;mismatches=9;indels=2;unknowns=0;Target=FBgn0262018.1 126 167 +;locus=RLOC_00000265
ChrX	stalkie_big_nohaplotig	exon	4807958	4808010	98	-	.	Parent=FBgn0262018.1.mrna1;Target=FBgn0262018.1 5141 5193 +
ChrX	stalkie_big_nohaplotig	exon	4810497	4810667	100	-	.	Parent=FBgn0262018.1.mrna1;Target=FBgn0262018.1 4970 5140 +
ChrX	stalkie_big_nohaplotig	exon	4810972	4811193	99	-	.	Parent=FBgn0262018.1.mrna1;Target=FBgn0262018.1 4748 4969 +
ChrX	stalkie_big_nohaplotig	exon	4824392	4824633	100	-	.	Parent=FBgn0262018.1.mrna1;Target=FBgn0262018.1 4506 4747 +
ChrX	stalkie_big_nohaplotig	exon	4830001	4830171	100	-	.	Parent=FBgn0262018.1.mrna1;Target=FBgn0262018.1 4335 4505 +
ChrX	stalkie_big_nohaplotig	exon	4830879	4833192	99	-	.	Parent=FBgn0262018.1.mrna1;Target=FBgn0262018.1 2021 4334 +
ChrX	stalkie_big_nohaplotig	exon	4838039	4838941	99	-	.	Parent=FBgn0262018.1.mrna1;Target=FBgn0262018.1 1118 2020 +
ChrX	stalkie_big_nohaplotig	exon	4839124	4839544	99	-	.	Parent=FBgn0262018.1.mrna1;Target=FBgn0262018.1 697 1117 +
ChrX	stalkie_big_nohaplotig	exon	4852434	4852571	100	-	.	Parent=FBgn0262018.1.mrna1;Target=FBgn0262018.1 559 696 +
ChrX	stalkie_big_nohaplotig	exon	4855848	4856012	100	-	.	Parent=FBgn0262018.1.mrna1;Target=FBgn0262018.1 394 558 +
ChrX	stalkie_big_nohaplotig	exon	4858563	4858678	100	-	.	Parent=FBgn0262018.1.mrna1;Target=FBgn0262018.1 278 393 +
ChrX	stalkie_big_nohaplotig	exon	4868095	4868248	98	-	.	Parent=FBgn0262018.1.mrna1;Target=FBgn0262018.1 126 277 +
ChrX	stalkie_big_nohaplotig	CDS	4868205	4868248	.	-	0	Parent=FBgn0262018.1.mrna1
ChrX	gffcl	locus	4821884	4822519	.	-	.	ID=RLOC_00000266;geneIDs=comp149131_c0_seq1.path1;transcripts=comp149131_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4821884	4822519	.	-	.	ID=comp149131_c0_seq1.mrna1;geneID=comp149131_c0_seq1.path1;Name=comp149131_c0_seq1;Dir=antisensecoverage=97.3;identity=98.8;matches=572;mismatches=7;indels=0;unknowns=0;locus=RLOC_00000266
ChrX	stalkie_big_nohaplotig	exon	4821884	4822228	98	-	.	Parent=comp149131_c0_seq1.mrna1;Target=comp149131_c0_seq1 17 361 -
ChrX	stalkie_big_nohaplotig	exon	4822286	4822519	99	-	.	Parent=comp149131_c0_seq1.mrna1;Target=comp149131_c0_seq1 362 595 -
ChrX	stalkie_big_nohaplotig	CDS	4822127	4822228	.	-	0	Parent=comp149131_c0_seq1.mrna1;Target=comp149131_c0_seq1 260 361 .
ChrX	stalkie_big_nohaplotig	CDS	4822286	4822435	.	-	0	Parent=comp149131_c0_seq1.mrna1;Target=comp149131_c0_seq1 362 511 .
ChrX	gffcl	locus	4976100	4976755	.	+	.	ID=RLOC_00000267;geneIDs=comp151248_c0_seq1.path1;transcripts=comp151248_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4976100	4976755	.	+	.	ID=comp151248_c0_seq1.mrna1;geneID=comp151248_c0_seq1.path1;Name=comp151248_c0_seq1;Dir=antisensecoverage=92.6;identity=98.6;matches=564;mismatches=8;indels=0;unknowns=0;locus=RLOC_00000267
ChrX	stalkie_big_nohaplotig	exon	4976100	4976519	98	+	.	Parent=comp151248_c0_seq1.mrna1;Target=comp151248_c0_seq1 197 616 -
ChrX	stalkie_big_nohaplotig	exon	4976604	4976755	98	+	.	Parent=comp151248_c0_seq1.mrna1;Target=comp151248_c0_seq1 45 196 -
ChrX	stalkie_big_nohaplotig	CDS	4976460	4976519	.	+	0	Parent=comp151248_c0_seq1.mrna1;Target=comp151248_c0_seq1 197 256 .
ChrX	stalkie_big_nohaplotig	CDS	4976604	4976627	.	+	0	Parent=comp151248_c0_seq1.mrna1;Target=comp151248_c0_seq1 173 196 .
ChrX	gffcl	locus	4977139	4978254	.	+	.	ID=RLOC_00000268;geneIDs=ORF1390.path1;transcripts=ORF1390.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4977139	4978254	.	+	.	ID=ORF1390.mrna1;geneID=ORF1390.path1;Name=ORF1390;Dir=indeterminatecoverage=99.7;identity=98.7;matches=1101;mismatches=15;indels=0;unknowns=0;Target=ORF1390 1119 4 .;locus=RLOC_00000268
ChrX	stalkie_big_nohaplotig	exon	4977139	4978254	98	+	.	Parent=ORF1390.mrna1
ChrX	stalkie_big_nohaplotig	CDS	4977139	4978254	.	+	0	Parent=ORF1390.mrna1
ChrX	gffcl	locus	4989460	4990423	.	+	.	ID=RLOC_00000269;geneIDs=comp148526_c0_seq1.path1;transcripts=comp148526_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4989460	4990423	.	+	.	ID=comp148526_c0_seq1.mrna1;geneID=comp148526_c0_seq1.path1;Name=comp148526_c0_seq1;Dir=sensecoverage=99.9;identity=99.7;matches=713;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000269
ChrX	stalkie_big_nohaplotig	exon	4989460	4989603	99	+	.	Parent=comp148526_c0_seq1.mrna1;Target=comp148526_c0_seq1 1 144 +
ChrX	stalkie_big_nohaplotig	exon	4989689	4989754	100	+	.	Parent=comp148526_c0_seq1.mrna1;Target=comp148526_c0_seq1 145 210 +
ChrX	stalkie_big_nohaplotig	exon	4989857	4990287	99	+	.	Parent=comp148526_c0_seq1.mrna1;Target=comp148526_c0_seq1 211 641 +
ChrX	stalkie_big_nohaplotig	exon	4990350	4990423	100	+	.	Parent=comp148526_c0_seq1.mrna1;Target=comp148526_c0_seq1 642 715 +
ChrX	stalkie_big_nohaplotig	CDS	4989575	4989603	.	+	0	Parent=comp148526_c0_seq1.mrna1;Target=comp148526_c0_seq1 116 144 +
ChrX	stalkie_big_nohaplotig	CDS	4989689	4989754	.	+	1	Parent=comp148526_c0_seq1.mrna1;Target=comp148526_c0_seq1 145 210 +
ChrX	stalkie_big_nohaplotig	CDS	4989857	4989971	.	+	1	Parent=comp148526_c0_seq1.mrna1;Target=comp148526_c0_seq1 211 325 +
ChrX	gffcl	locus	4997764	4999302	.	+	.	ID=RLOC_00000270;geneIDs=ORF739.path1;transcripts=ORF739.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	4997764	4999302	.	+	.	ID=ORF739.mrna1;geneID=ORF739.path1;Name=ORF739;Dir=sensecoverage=100.0;identity=98.8;matches=1456;mismatches=17;indels=0;unknowns=0;locus=RLOC_00000270
ChrX	stalkie_big_nohaplotig	exon	4997764	4998027	99	+	.	Parent=ORF739.mrna1;Target=ORF739 1 264 +
ChrX	stalkie_big_nohaplotig	exon	4998094	4999302	98	+	.	Parent=ORF739.mrna1;Target=ORF739 265 1473 +
ChrX	stalkie_big_nohaplotig	CDS	4997764	4998027	.	+	0	Parent=ORF739.mrna1;Target=ORF739 1 264 +
ChrX	stalkie_big_nohaplotig	CDS	4998094	4999302	.	+	0	Parent=ORF739.mrna1;Target=ORF739 265 1473 +
ChrX	gffcl	locus	5024859	5027093	.	+	.	ID=RLOC_00000271;geneIDs=comp150511_c0_seq1.path1;transcripts=comp150511_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5024859	5027093	.	+	.	ID=comp150511_c0_seq1.mrna1;geneID=comp150511_c0_seq1.path1;Name=comp150511_c0_seq1;Dir=sensecoverage=99.7;identity=97.1;matches=847;mismatches=21;indels=4;unknowns=0;locus=RLOC_00000271
ChrX	stalkie_big_nohaplotig	exon	5024859	5025068	97	+	.	Parent=comp150511_c0_seq1.mrna1;Target=comp150511_c0_seq1 1 210 +
ChrX	stalkie_big_nohaplotig	exon	5025328	5025670	97	+	.	Parent=comp150511_c0_seq1.mrna1;Target=comp150511_c0_seq1 211 553 +
ChrX	stalkie_big_nohaplotig	exon	5026402	5026418	100	+	.	Parent=comp150511_c0_seq1.mrna1;Target=comp150511_c0_seq1 554 570 +
ChrX	stalkie_big_nohaplotig	exon	5026461	5026500	93	+	.	Parent=comp150511_c0_seq1.mrna1;Target=comp150511_c0_seq1 583 625 +
ChrX	stalkie_big_nohaplotig	exon	5026836	5027093	97	+	.	Parent=comp150511_c0_seq1.mrna1;Target=comp150511_c0_seq1 626 884 +
ChrX	stalkie_big_nohaplotig	CDS	5024937	5025068	.	+	0	Parent=comp150511_c0_seq1.mrna1;Target=comp150511_c0_seq1 79 210 +
ChrX	stalkie_big_nohaplotig	CDS	5025328	5025411	.	+	0	Parent=comp150511_c0_seq1.mrna1;Target=comp150511_c0_seq1 211 294 +
ChrX	gffcl	locus	5030810	5031323	.	+	.	ID=RLOC_00000272;geneIDs=comp135498_c0_seq1.path1;transcripts=comp135498_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5030810	5031323	.	+	.	ID=comp135498_c0_seq1.mrna1;geneID=comp135498_c0_seq1.path1;Name=comp135498_c0_seq1;Dir=sensecoverage=99.6;identity=100.0;matches=452;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000272
ChrX	stalkie_big_nohaplotig	exon	5030810	5031034	100	+	.	Parent=comp135498_c0_seq1.mrna1;Target=comp135498_c0_seq1 1 225 +
ChrX	stalkie_big_nohaplotig	exon	5031097	5031323	100	+	.	Parent=comp135498_c0_seq1.mrna1;Target=comp135498_c0_seq1 226 452 +
ChrX	stalkie_big_nohaplotig	CDS	5030912	5031034	.	+	0	Parent=comp135498_c0_seq1.mrna1;Target=comp135498_c0_seq1 103 225 +
ChrX	stalkie_big_nohaplotig	CDS	5031097	5031201	.	+	0	Parent=comp135498_c0_seq1.mrna1;Target=comp135498_c0_seq1 226 330 +
ChrX	gffcl	locus	5059020	5060461	.	.	.	ID=RLOC_00000273;geneIDs=FBgn0002413.5.path1,comp161012_c0_seq1.path1;transcripts=FBgn0002413.5.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5059022	5060461	.	-	.	ID=FBgn0002413.5.mrna1;geneID=FBgn0002413.5.path1;Name=FBgn0002413.5;Dir=indeterminatecoverage=100.0;identity=96.4;matches=1402;mismatches=32;indels=21;unknowns=6;Target=FBgn0002413.5 1461 1 .;locus=RLOC_00000273
ChrX	stalkie_big_nohaplotig	exon	5059022	5060461	96	-	.	Parent=FBgn0002413.5.mrna1
ChrX	stalkie_big_nohaplotig	CDS	5059022	5060461	.	-	0	Parent=FBgn0002413.5.mrna1
ChrX	gffcl	locus	5095849	5096668	.	-	.	ID=RLOC_00000274;geneIDs=comp161012_c0_seq1.path2;transcripts=comp161012_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	5095849	5096668	.	-	.	ID=comp161012_c0_seq1.mrna2;geneID=comp161012_c0_seq1.path2;Name=comp161012_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.1;matches=791;mismatches=29;indels=21;unknowns=0;Target=comp161012_c0_seq1 841 1 .;CDS_Target=comp161012_c0_seq1 414 268 .;locus=RLOC_00000274
ChrX	stalkie_big_nohaplotig	exon	5095849	5096668	94	-	.	Parent=comp161012_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	5096276	5096401	.	-	0	Parent=comp161012_c0_seq1.mrna2
ChrX	gffcl	locus	5131131	5131729	.	+	.	ID=RLOC_00000275;geneIDs=comp105825_c0_seq1.path1;transcripts=comp105825_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5131131	5131729	.	+	.	ID=comp105825_c0_seq1.mrna1;geneID=comp105825_c0_seq1.path1;Name=comp105825_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=599;mismatches=0;indels=0;unknowns=0;Target=comp105825_c0_seq1 599 1 .;CDS_Target=comp105825_c0_seq1 539 435 .;locus=RLOC_00000275
ChrX	stalkie_big_nohaplotig	exon	5131131	5131729	100	+	.	Parent=comp105825_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	5131565	5131669	.	+	0	Parent=comp105825_c0_seq1.mrna1
ChrX	gffcl	locus	5134609	5135910	.	-	.	ID=RLOC_00000276;geneIDs=FBgn0002413.1.path1;transcripts=FBgn0002413.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5134609	5135910	.	-	.	ID=FBgn0002413.1.mrna1;geneID=FBgn0002413.1.path1;Name=FBgn0002413.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1302;mismatches=0;indels=0;unknowns=0;Target=FBgn0002413.1 1302 1 .;locus=RLOC_00000276
ChrX	stalkie_big_nohaplotig	exon	5134609	5135910	100	-	.	Parent=FBgn0002413.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	5134609	5135910	.	-	0	Parent=FBgn0002413.1.mrna1
ChrX	gffcl	locus	5148047	5148471	.	-	.	ID=RLOC_00000277;geneIDs=comp7075_c1_seq1.path1;transcripts=comp7075_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5148047	5148471	.	-	.	ID=comp7075_c1_seq1.mrna1;geneID=comp7075_c1_seq1.path1;Name=comp7075_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=425;mismatches=0;indels=0;unknowns=0;Target=comp7075_c1_seq1 425 1 .;CDS_Target=comp7075_c1_seq1 148 2 .;locus=RLOC_00000277
ChrX	stalkie_big_nohaplotig	exon	5148047	5148471	100	-	.	Parent=comp7075_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	5148324	5148470	.	-	0	Parent=comp7075_c1_seq1.mrna1
ChrX	gffcl	locus	5218353	5224712	.	-	.	ID=RLOC_00000279;geneIDs=comp210983_c0_seq1.path1;transcripts=comp210983_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5218353	5224712	.	-	.	ID=comp210983_c0_seq1.mrna1;geneID=comp210983_c0_seq1.path1;Name=comp210983_c0_seq1;Dir=antisensecoverage=98.2;identity=100.0;matches=431;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000279
ChrX	stalkie_big_nohaplotig	exon	5218353	5218633	100	-	.	Parent=comp210983_c0_seq1.mrna1;Target=comp210983_c0_seq1 2 282 -
ChrX	stalkie_big_nohaplotig	exon	5224563	5224712	100	-	.	Parent=comp210983_c0_seq1.mrna1;Target=comp210983_c0_seq1 283 432 -
ChrX	stalkie_big_nohaplotig	CDS	5218390	5218633	.	-	1	Parent=comp210983_c0_seq1.mrna1;Target=comp210983_c0_seq1 39 282 .
ChrX	stalkie_big_nohaplotig	CDS	5224563	5224597	.	-	0	Parent=comp210983_c0_seq1.mrna1;Target=comp210983_c0_seq1 283 317 .
ChrX	gffcl	locus	5231520	5233322	.	+	.	ID=RLOC_00000280;geneIDs=FBgn0030738.1.path1;transcripts=FBgn0030738.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5231520	5233322	.	+	.	ID=FBgn0030738.1.mrna1;geneID=FBgn0030738.1.path1;Name=FBgn0030738.1;Dir=sensecoverage=100.0;identity=99.9;matches=1535;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000280
ChrX	stalkie_big_nohaplotig	exon	5231520	5231652	99	+	.	Parent=FBgn0030738.1.mrna1;Target=FBgn0030738.1 1 133 +
ChrX	stalkie_big_nohaplotig	exon	5231732	5232242	100	+	.	Parent=FBgn0030738.1.mrna1;Target=FBgn0030738.1 134 644 +
ChrX	stalkie_big_nohaplotig	exon	5232306	5232675	100	+	.	Parent=FBgn0030738.1.mrna1;Target=FBgn0030738.1 645 1014 +
ChrX	stalkie_big_nohaplotig	exon	5232738	5233142	100	+	.	Parent=FBgn0030738.1.mrna1;Target=FBgn0030738.1 1015 1419 +
ChrX	stalkie_big_nohaplotig	exon	5233206	5233322	100	+	.	Parent=FBgn0030738.1.mrna1;Target=FBgn0030738.1 1420 1536 +
ChrX	stalkie_big_nohaplotig	CDS	5231520	5231652	.	+	0	Parent=FBgn0030738.1.mrna1;Target=FBgn0030738.1 1 133 +
ChrX	stalkie_big_nohaplotig	CDS	5231732	5232242	.	+	2	Parent=FBgn0030738.1.mrna1;Target=FBgn0030738.1 134 644 +
ChrX	stalkie_big_nohaplotig	CDS	5232306	5232675	.	+	1	Parent=FBgn0030738.1.mrna1;Target=FBgn0030738.1 645 1014 +
ChrX	stalkie_big_nohaplotig	CDS	5232738	5233142	.	+	0	Parent=FBgn0030738.1.mrna1;Target=FBgn0030738.1 1015 1419 +
ChrX	stalkie_big_nohaplotig	CDS	5233206	5233322	.	+	0	Parent=FBgn0030738.1.mrna1;Target=FBgn0030738.1 1420 1536 +
ChrX	gffcl	locus	5234428	5235184	.	+	.	ID=RLOC_00000281;geneIDs=comp59678_c0_seq1.path1;transcripts=comp59678_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5234428	5235184	.	+	.	ID=comp59678_c0_seq1.mrna1;geneID=comp59678_c0_seq1.path1;Name=comp59678_c0_seq1;Dir=indeterminatecoverage=96.8;identity=100.0;matches=757;mismatches=0;indels=0;unknowns=0;Target=comp59678_c0_seq1 764 8 .;CDS_Target=comp59678_c0_seq1 600 121 .;locus=RLOC_00000281
ChrX	stalkie_big_nohaplotig	exon	5234428	5235184	100	+	.	Parent=comp59678_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	5234541	5235020	.	+	0	Parent=comp59678_c0_seq1.mrna1
ChrX	gffcl	locus	5281516	6032360	.	+	.	ID=RLOC_00000282;geneIDs=comp161803_c2_seq1.path1;transcripts=comp161803_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5281516	6032360	.	+	.	ID=comp161803_c2_seq1.mrna1;geneID=comp161803_c2_seq1.path1;Name=comp161803_c2_seq1;Dir=indeterminatecoverage=59.9;identity=77.2;matches=895;mismatches=122;indels=142;unknowns=0;locus=RLOC_00000282
ChrX	stalkie_big_nohaplotig	exon	5281516	5281522	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1150 1144 .
ChrX	stalkie_big_nohaplotig	exon	5282042	5282046	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1155 1151 .
ChrX	stalkie_big_nohaplotig	exon	5288255	5288262	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1163 1156 .
ChrX	stalkie_big_nohaplotig	exon	5319320	5319334	93	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1178 1164 .
ChrX	stalkie_big_nohaplotig	exon	5330273	5330283	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1212 1202 .
ChrX	stalkie_big_nohaplotig	exon	5350534	5350539	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1286 1281 .
ChrX	stalkie_big_nohaplotig	exon	5350717	5350720	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1290 1287 .
ChrX	stalkie_big_nohaplotig	exon	5359748	5359750	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1293 1291 .
ChrX	stalkie_big_nohaplotig	exon	5386500	5386575	53	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1387 1294 .
ChrX	stalkie_big_nohaplotig	exon	5419166	5419168	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1394 1392 .
ChrX	stalkie_big_nohaplotig	exon	5430294	5430295	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1396 1395 .
ChrX	stalkie_big_nohaplotig	exon	5435617	5435625	88	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1405 1397 .
ChrX	stalkie_big_nohaplotig	exon	5440189	5440198	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1415 1406 .
ChrX	stalkie_big_nohaplotig	exon	5446553	5446565	84	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1428 1416 .
ChrX	stalkie_big_nohaplotig	exon	5497448	5497474	34	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1501 1429 .
ChrX	stalkie_big_nohaplotig	exon	5503809	5503851	54	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1554 1502 .
ChrX	stalkie_big_nohaplotig	exon	5518452	5518474	53	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1629 1605 .
ChrX	stalkie_big_nohaplotig	exon	5532738	5532758	80	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1646 1630 .
ChrX	stalkie_big_nohaplotig	exon	5563242	5563252	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1657 1647 .
ChrX	stalkie_big_nohaplotig	exon	5610889	5610963	53	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1724 1658 .
ChrX	stalkie_big_nohaplotig	exon	5701389	5701397	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1734 1726 .
ChrX	stalkie_big_nohaplotig	exon	5709444	5709451	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1747 1740 .
ChrX	stalkie_big_nohaplotig	exon	5709530	5709537	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1755 1748 .
ChrX	stalkie_big_nohaplotig	exon	5709579	5709588	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1803 1794 .
ChrX	stalkie_big_nohaplotig	exon	5709612	5709620	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1829 1821 .
ChrX	stalkie_big_nohaplotig	exon	5901557	5901565	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 2156 2148 .
ChrX	stalkie_big_nohaplotig	exon	5906950	5906966	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 2188 2172 .
ChrX	stalkie_big_nohaplotig	exon	5941278	5941300	64	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 2365 2341 .
ChrX	stalkie_big_nohaplotig	exon	5942989	5943059	53	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 2432 2367 .
ChrX	stalkie_big_nohaplotig	exon	5950255	5950293	54	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 2476 2433 .
ChrX	stalkie_big_nohaplotig	exon	5969910	5969939	60	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 2506 2477 .
ChrX	stalkie_big_nohaplotig	exon	5972764	5972772	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 2515 2507 .
ChrX	stalkie_big_nohaplotig	exon	5984528	5984536	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 2524 2516 .
ChrX	stalkie_big_nohaplotig	exon	5997674	5997681	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 2532 2525 .
ChrX	stalkie_big_nohaplotig	exon	5998940	5998943	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 2536 2533 .
ChrX	stalkie_big_nohaplotig	exon	6020643	6020647	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 2541 2537 .
ChrX	stalkie_big_nohaplotig	exon	6028002	6028003	100	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 2543 2542 .
ChrX	stalkie_big_nohaplotig	exon	6031887	6032095	96	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 2752 2544 .
ChrX	stalkie_big_nohaplotig	exon	6032161	6032360	98	+	.	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 2952 2753 .
ChrX	stalkie_big_nohaplotig	CDS	5518462	5518474	.	+	0	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1629 1614 .
ChrX	stalkie_big_nohaplotig	CDS	5532738	5532758	.	+	2	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1646 1630 .
ChrX	stalkie_big_nohaplotig	CDS	5563242	5563250	.	+	2	Parent=comp161803_c2_seq1.mrna1;Target=comp161803_c2_seq1 1655 1647 .
ChrX	gffcl	locus	5284344	5288606	.	-	.	ID=RLOC_00000283;geneIDs=ORF54.path1;transcripts=ORF54.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5284344	5288606	.	-	.	ID=ORF54.mrna1;geneID=ORF54.path1;Name=ORF54;Dir=sensecoverage=97.6;identity=100.0;matches=3273;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000283
ChrX	stalkie_big_nohaplotig	exon	5284344	5284850	100	-	.	Parent=ORF54.mrna1;Target=ORF54 2848 3354 +
ChrX	stalkie_big_nohaplotig	exon	5284940	5285107	100	-	.	Parent=ORF54.mrna1;Target=ORF54 2680 2847 +
ChrX	stalkie_big_nohaplotig	exon	5285183	5285368	100	-	.	Parent=ORF54.mrna1;Target=ORF54 2494 2679 +
ChrX	stalkie_big_nohaplotig	exon	5285430	5285633	100	-	.	Parent=ORF54.mrna1;Target=ORF54 2290 2493 +
ChrX	stalkie_big_nohaplotig	exon	5285691	5285909	99	-	.	Parent=ORF54.mrna1;Target=ORF54 2071 2289 +
ChrX	stalkie_big_nohaplotig	exon	5285967	5286119	100	-	.	Parent=ORF54.mrna1;Target=ORF54 1918 2070 +
ChrX	stalkie_big_nohaplotig	exon	5286191	5286415	100	-	.	Parent=ORF54.mrna1;Target=ORF54 1693 1917 +
ChrX	stalkie_big_nohaplotig	exon	5286995	5288606	100	-	.	Parent=ORF54.mrna1;Target=ORF54 81 1692 +
ChrX	stalkie_big_nohaplotig	CDS	5284344	5284850	.	-	0	Parent=ORF54.mrna1;Target=ORF54 2848 3354 +
ChrX	stalkie_big_nohaplotig	CDS	5284940	5285107	.	-	0	Parent=ORF54.mrna1;Target=ORF54 2680 2847 +
ChrX	stalkie_big_nohaplotig	CDS	5285183	5285368	.	-	0	Parent=ORF54.mrna1;Target=ORF54 2494 2679 +
ChrX	stalkie_big_nohaplotig	CDS	5285430	5285633	.	-	0	Parent=ORF54.mrna1;Target=ORF54 2290 2493 +
ChrX	stalkie_big_nohaplotig	CDS	5285691	5285909	.	-	0	Parent=ORF54.mrna1;Target=ORF54 2071 2289 +
ChrX	stalkie_big_nohaplotig	CDS	5285967	5286119	.	-	0	Parent=ORF54.mrna1;Target=ORF54 1918 2070 +
ChrX	stalkie_big_nohaplotig	CDS	5286191	5286415	.	-	0	Parent=ORF54.mrna1;Target=ORF54 1693 1917 +
ChrX	stalkie_big_nohaplotig	CDS	5286995	5288605	.	-	0	Parent=ORF54.mrna1;Target=ORF54 82 1692 +
ChrX	gffcl	locus	5290663	7215026	.	-	.	ID=RLOC_00000284;geneIDs=comp85882_c0_seq1.path1;transcripts=comp85882_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5290663	7215026	.	-	.	ID=comp85882_c0_seq1.mrna1;geneID=comp85882_c0_seq1.path1;Name=comp85882_c0_seq1;Dir=indeterminatecoverage=87.5;identity=95.2;matches=480;mismatches=7;indels=17;unknowns=0;Target=comp85882_c0_seq1 341 279 .;locus=RLOC_00000284
ChrX	stalkie_big_nohaplotig	exon	5290663	5290671	100	-	.	Parent=comp85882_c0_seq1.mrna1;Target=comp85882_c0_seq1 497 489 .
ChrX	stalkie_big_nohaplotig	exon	5297642	5297643	100	-	.	Parent=comp85882_c0_seq1.mrna1;Target=comp85882_c0_seq1 488 487 .
ChrX	stalkie_big_nohaplotig	exon	5305357	5305362	100	-	.	Parent=comp85882_c0_seq1.mrna1;Target=comp85882_c0_seq1 486 481 .
ChrX	stalkie_big_nohaplotig	exon	5307093	5307117	73	-	.	Parent=comp85882_c0_seq1.mrna1;Target=comp85882_c0_seq1 480 455 .
ChrX	stalkie_big_nohaplotig	exon	5310569	5310572	100	-	.	Parent=comp85882_c0_seq1.mrna1;Target=comp85882_c0_seq1 454 451 .
ChrX	stalkie_big_nohaplotig	exon	5315791	5315797	100	-	.	Parent=comp85882_c0_seq1.mrna1;Target=comp85882_c0_seq1 450 444 .
ChrX	stalkie_big_nohaplotig	exon	5322887	5322889	100	-	.	Parent=comp85882_c0_seq1.mrna1;Target=comp85882_c0_seq1 443 441 .
ChrX	stalkie_big_nohaplotig	exon	5343046	5343049	100	-	.	Parent=comp85882_c0_seq1.mrna1;Target=comp85882_c0_seq1 440 437 .
ChrX	stalkie_big_nohaplotig	exon	5344752	5344754	100	-	.	Parent=comp85882_c0_seq1.mrna1;Target=comp85882_c0_seq1 436 434 .
ChrX	stalkie_big_nohaplotig	exon	5351408	5351413	100	-	.	Parent=comp85882_c0_seq1.mrna1;Target=comp85882_c0_seq1 433 428 .
ChrX	stalkie_big_nohaplotig	exon	5375652	5375657	100	-	.	Parent=comp85882_c0_seq1.mrna1;Target=comp85882_c0_seq1 427 422 .
ChrX	stalkie_big_nohaplotig	exon	5389323	5389335	54	-	.	Parent=comp85882_c0_seq1.mrna1;Target=comp85882_c0_seq1 421 400 .
ChrX	stalkie_big_nohaplotig	exon	5397568	5397573	100	-	.	Parent=comp85882_c0_seq1.mrna1;Target=comp85882_c0_seq1 399 394 .
ChrX	stalkie_big_nohaplotig	exon	5400425	5400430	100	-	.	Parent=comp85882_c0_seq1.mrna1;Target=comp85882_c0_seq1 393 388 .
ChrX	stalkie_big_nohaplotig	exon	7214633	7215026	98	-	.	Parent=comp85882_c0_seq1.mrna1;Target=comp85882_c0_seq1 387 1 .
ChrX	stalkie_big_nohaplotig	CDS	7214679	7214741	.	-	0	Parent=comp85882_c0_seq1.mrna1
ChrX	gffcl	locus	5307704	5312148	.	+	.	ID=RLOC_00000285;geneIDs=FBgn0023423.2.path1;transcripts=FBgn0023423.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5307704	5312148	.	+	.	ID=FBgn0023423.2.mrna1;geneID=FBgn0023423.2.path1;Name=FBgn0023423.2;Dir=sensecoverage=98.7;identity=100.0;matches=1416;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000285
ChrX	stalkie_big_nohaplotig	exon	5307704	5308749	100	+	.	Parent=FBgn0023423.2.mrna1;Target=FBgn0023423.2 19 1064 +
ChrX	stalkie_big_nohaplotig	exon	5308810	5309100	100	+	.	Parent=FBgn0023423.2.mrna1;Target=FBgn0023423.2 1065 1355 +
ChrX	stalkie_big_nohaplotig	exon	5311102	5311119	100	+	.	Parent=FBgn0023423.2.mrna1;Target=FBgn0023423.2 1356 1373 +
ChrX	stalkie_big_nohaplotig	exon	5312088	5312148	100	+	.	Parent=FBgn0023423.2.mrna1;Target=FBgn0023423.2 1374 1434 +
ChrX	stalkie_big_nohaplotig	CDS	5307704	5308749	.	+	0	Parent=FBgn0023423.2.mrna1;Target=FBgn0023423.2 19 1064 +
ChrX	stalkie_big_nohaplotig	CDS	5308810	5309100	.	+	1	Parent=FBgn0023423.2.mrna1;Target=FBgn0023423.2 1065 1355 +
ChrX	stalkie_big_nohaplotig	CDS	5311102	5311119	.	+	1	Parent=FBgn0023423.2.mrna1;Target=FBgn0023423.2 1356 1373 +
ChrX	stalkie_big_nohaplotig	CDS	5312088	5312148	.	+	1	Parent=FBgn0023423.2.mrna1;Target=FBgn0023423.2 1374 1434 +
ChrX	gffcl	locus	5326358	5326982	.	-	.	ID=RLOC_00000286;geneIDs=comp139963_c0_seq1.path1;transcripts=comp139963_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5326358	5326982	.	-	.	ID=comp139963_c0_seq1.mrna1;geneID=comp139963_c0_seq1.path1;Name=comp139963_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.4;matches=596;mismatches=16;indels=13;unknowns=0;Target=comp139963_c0_seq1 612 1 .;CDS_Target=comp139963_c0_seq1 476 237 .;locus=RLOC_00000286
ChrX	stalkie_big_nohaplotig	exon	5326358	5326982	95	-	.	Parent=comp139963_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	5326506	5326746	.	-	0	Parent=comp139963_c0_seq1.mrna1
ChrX	gffcl	locus	5344883	5345511	.	+	.	ID=RLOC_00000287;geneIDs=comp107373_c0_seq1.path1;transcripts=comp107373_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5344883	5345511	.	+	.	ID=comp107373_c0_seq1.mrna1;geneID=comp107373_c0_seq1.path1;Name=comp107373_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=556;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000287
ChrX	stalkie_big_nohaplotig	exon	5344883	5345064	100	+	.	Parent=comp107373_c0_seq1.mrna1;Target=comp107373_c0_seq1 1 182 +
ChrX	stalkie_big_nohaplotig	exon	5345138	5345511	100	+	.	Parent=comp107373_c0_seq1.mrna1;Target=comp107373_c0_seq1 183 556 +
ChrX	stalkie_big_nohaplotig	CDS	5344885	5345064	.	+	0	Parent=comp107373_c0_seq1.mrna1;Target=comp107373_c0_seq1 3 182 +
ChrX	stalkie_big_nohaplotig	CDS	5345138	5345323	.	+	0	Parent=comp107373_c0_seq1.mrna1;Target=comp107373_c0_seq1 183 368 +
ChrX	gffcl	locus	5466391	5804724	.	.	.	ID=RLOC_00000288;geneIDs=FBgn0015609.1.path1,comp73598_c0_seq1.path1;transcripts=FBgn0015609.1.mrna1,comp73598_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5466391	5804724	.	+	.	ID=FBgn0015609.1.mrna1;geneID=FBgn0015609.1.path1;Name=FBgn0015609.1;Dir=sensecoverage=66.0;identity=99.9;matches=6271;mismatches=9;indels=0;unknowns=0;locus=RLOC_00000288
ChrX	stalkie_big_nohaplotig	exon	5466391	5466628	100	+	.	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 3231 3468 +
ChrX	stalkie_big_nohaplotig	exon	5466696	5466887	100	+	.	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 3469 3660 +
ChrX	stalkie_big_nohaplotig	exon	5477153	5477343	100	+	.	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 3661 3851 +
ChrX	stalkie_big_nohaplotig	exon	5497175	5497364	100	+	.	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 3852 4041 +
ChrX	stalkie_big_nohaplotig	exon	5507009	5507191	100	+	.	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 4042 4224 +
ChrX	stalkie_big_nohaplotig	exon	5514694	5514883	99	+	.	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 4225 4414 +
ChrX	stalkie_big_nohaplotig	exon	5745651	5745794	100	+	.	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 4415 4558 +
ChrX	stalkie_big_nohaplotig	exon	5746158	5746273	100	+	.	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 4559 4674 +
ChrX	stalkie_big_nohaplotig	exon	5750502	5750666	100	+	.	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 4675 4839 +
ChrX	stalkie_big_nohaplotig	exon	5758937	5759074	100	+	.	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 4840 4977 +
ChrX	stalkie_big_nohaplotig	exon	5769796	5771119	99	+	.	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 4978 6301 +
ChrX	stalkie_big_nohaplotig	exon	5775184	5777485	99	+	.	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 6302 8603 +
ChrX	stalkie_big_nohaplotig	exon	5777828	5777998	100	+	.	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 8604 8774 +
ChrX	stalkie_big_nohaplotig	exon	5793563	5793801	100	+	.	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 8775 9013 +
ChrX	stalkie_big_nohaplotig	exon	5800256	5800468	99	+	.	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 9014 9226 +
ChrX	stalkie_big_nohaplotig	exon	5801076	5801246	99	+	.	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 9227 9397 +
ChrX	stalkie_big_nohaplotig	exon	5804612	5804724	100	+	.	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 9398 9510 +
ChrX	stalkie_big_nohaplotig	CDS	5466392	5466628	.	+	0	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 3232 3468 +
ChrX	stalkie_big_nohaplotig	CDS	5466696	5466887	.	+	0	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 3469 3660 +
ChrX	stalkie_big_nohaplotig	CDS	5477153	5477343	.	+	0	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 3661 3851 +
ChrX	stalkie_big_nohaplotig	CDS	5497175	5497364	.	+	1	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 3852 4041 +
ChrX	stalkie_big_nohaplotig	CDS	5507009	5507191	.	+	0	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 4042 4224 +
ChrX	stalkie_big_nohaplotig	CDS	5514694	5514883	.	+	0	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 4225 4414 +
ChrX	stalkie_big_nohaplotig	CDS	5745651	5745794	.	+	2	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 4415 4558 +
ChrX	stalkie_big_nohaplotig	CDS	5746158	5746273	.	+	2	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 4559 4674 +
ChrX	stalkie_big_nohaplotig	CDS	5750502	5750666	.	+	0	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 4675 4839 +
ChrX	stalkie_big_nohaplotig	CDS	5758937	5759074	.	+	0	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 4840 4977 +
ChrX	stalkie_big_nohaplotig	CDS	5769796	5771119	.	+	0	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 4978 6301 +
ChrX	stalkie_big_nohaplotig	CDS	5775184	5777485	.	+	2	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 6302 8603 +
ChrX	stalkie_big_nohaplotig	CDS	5777828	5777998	.	+	1	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 8604 8774 +
ChrX	stalkie_big_nohaplotig	CDS	5793563	5793801	.	+	1	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 8775 9013 +
ChrX	stalkie_big_nohaplotig	CDS	5800256	5800468	.	+	2	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 9014 9226 +
ChrX	stalkie_big_nohaplotig	CDS	5801076	5801246	.	+	2	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 9227 9397 +
ChrX	stalkie_big_nohaplotig	CDS	5804612	5804724	.	+	2	Parent=FBgn0015609.1.mrna1;Target=FBgn0015609.1 9398 9510 +
ChrX	stalkie_big_nohaplotig	mRNA	5514184	5514714	.	-	.	ID=comp73598_c0_seq1.mrna1;geneID=comp73598_c0_seq1.path1;Name=comp73598_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.6;matches=488;mismatches=11;indels=34;unknowns=0;Target=comp73598_c0_seq1 501 1 .;CDS_Target=comp73598_c0_seq1 500 216 .;locus=RLOC_00000288
ChrX	stalkie_big_nohaplotig	exon	5514184	5514714	91	-	.	Parent=comp73598_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	5514185	5514469	.	-	0	Parent=comp73598_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5810147	5811926	.	+	.	ID=comp156993_c0_seq1.mrna1;geneID=comp156993_c0_seq1.path1;Name=comp156993_c0_seq1;Dir=sensecoverage=99.9;identity=97.3;matches=1576;mismatches=20;indels=24;unknowns=0;Target=comp156993_c0_seq1 700 810 +;locus=RLOC_00000289
ChrX	stalkie_big_nohaplotig	exon	5810147	5810982	99	+	.	Parent=comp156993_c0_seq1.mrna1;Target=comp156993_c0_seq1 1 837 +
ChrX	stalkie_big_nohaplotig	exon	5811167	5811926	95	+	.	Parent=comp156993_c0_seq1.mrna1;Target=comp156993_c0_seq1 838 1620 +
ChrX	stalkie_big_nohaplotig	CDS	5810845	5810955	.	+	0	Parent=comp156993_c0_seq1.mrna1
ChrX	gffcl	locus	5557482	5558856	.	-	.	ID=RLOC_00000290;geneIDs=comp154769_c0_seq1.path1;transcripts=comp154769_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5557482	5558856	.	-	.	ID=comp154769_c0_seq1.mrna1;geneID=comp154769_c0_seq1.path1;Name=comp154769_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=758;mismatches=9;indels=9;unknowns=0;Target=comp154769_c0_seq1 471 367 .;locus=RLOC_00000290
ChrX	stalkie_big_nohaplotig	exon	5557482	5558112	97	-	.	Parent=comp154769_c0_seq1.mrna1;Target=comp154769_c0_seq1 767 146 .
ChrX	stalkie_big_nohaplotig	exon	5558712	5558856	97	-	.	Parent=comp154769_c0_seq1.mrna1;Target=comp154769_c0_seq1 145 1 .
ChrX	stalkie_big_nohaplotig	CDS	5557778	5557882	.	-	0	Parent=comp154769_c0_seq1.mrna1
ChrX	gffcl	locus	5616490	5617438	.	-	.	ID=RLOC_00000292;geneIDs=comp148740_c0_seq1.path1;transcripts=comp148740_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5616490	5617438	.	-	.	ID=comp148740_c0_seq1.mrna1;geneID=comp148740_c0_seq1.path1;Name=comp148740_c0_seq1;Dir=sensecoverage=96.9;identity=98.1;matches=683;mismatches=13;indels=0;unknowns=0;Target=comp148740_c0_seq1 227 511 +;locus=RLOC_00000292
ChrX	stalkie_big_nohaplotig	exon	5616490	5617013	98	-	.	Parent=comp148740_c0_seq1.mrna1;Target=comp148740_c0_seq1 190 713 +
ChrX	stalkie_big_nohaplotig	exon	5617171	5617229	98	-	.	Parent=comp148740_c0_seq1.mrna1;Target=comp148740_c0_seq1 131 189 +
ChrX	stalkie_big_nohaplotig	exon	5617326	5617438	97	-	.	Parent=comp148740_c0_seq1.mrna1;Target=comp148740_c0_seq1 18 130 +
ChrX	stalkie_big_nohaplotig	CDS	5616692	5616976	.	-	0	Parent=comp148740_c0_seq1.mrna1
ChrX	gffcl	locus	5806468	5808549	.	+	.	ID=RLOC_00000295;geneIDs=comp152535_c0_seq1.path1;transcripts=comp152535_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5806468	5808549	.	+	.	ID=comp152535_c0_seq1.mrna1;geneID=comp152535_c0_seq1.path1;Name=comp152535_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1909;mismatches=2;indels=0;unknowns=0;Target=comp152535_c0_seq1 1103 1008 .;locus=RLOC_00000295
ChrX	stalkie_big_nohaplotig	exon	5806468	5807917	99	+	.	Parent=comp152535_c0_seq1.mrna1;Target=comp152535_c0_seq1 1450 1 .
ChrX	stalkie_big_nohaplotig	exon	5808089	5808549	100	+	.	Parent=comp152535_c0_seq1.mrna1;Target=comp152535_c0_seq1 1911 1451 .
ChrX	stalkie_big_nohaplotig	CDS	5807475	5807570	.	+	0	Parent=comp152535_c0_seq1.mrna1
ChrX	gffcl	locus	5813503	5814809	.	+	.	ID=RLOC_00000296;geneIDs=comp156213_c0_seq1.path1;transcripts=comp156213_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5813503	5814809	.	+	.	ID=comp156213_c0_seq1.mrna1;geneID=comp156213_c0_seq1.path1;Name=comp156213_c0_seq1;Dir=indeterminatecoverage=96.7;identity=99.3;matches=1298;mismatches=9;indels=0;unknowns=0;Target=comp156213_c0_seq1 1307 1 .;CDS_Target=comp156213_c0_seq1 1151 942 .;locus=RLOC_00000296
ChrX	stalkie_big_nohaplotig	exon	5813503	5814809	99	+	.	Parent=comp156213_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	5814444	5814653	.	+	0	Parent=comp156213_c0_seq1.mrna1
ChrX	gffcl	locus	5815685	5816010	.	+	.	ID=RLOC_00000297;geneIDs=comp64569_c0_seq1.path1;transcripts=comp64569_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5815685	5816010	.	+	.	ID=comp64569_c0_seq1.mrna1;geneID=comp64569_c0_seq1.path1;Name=comp64569_c0_seq1;Dir=indeterminatecoverage=93.7;identity=100.0;matches=326;mismatches=0;indels=0;unknowns=0;Target=comp64569_c0_seq1 334 9 .;CDS_Target=comp64569_c0_seq1 271 140 .;locus=RLOC_00000297
ChrX	stalkie_big_nohaplotig	exon	5815685	5816010	100	+	.	Parent=comp64569_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	5815816	5815947	.	+	0	Parent=comp64569_c0_seq1.mrna1
ChrX	gffcl	locus	5821263	6988484	.	+	.	ID=RLOC_00000298;geneIDs=comp142475_c0_seq1.path1;transcripts=comp142475_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5821263	6988484	.	+	.	ID=comp142475_c0_seq1.mrna1;geneID=comp142475_c0_seq1.path1;Name=comp142475_c0_seq1;Dir=sensecoverage=93.5;identity=99.5;matches=919;mismatches=5;indels=0;unknowns=0;Target=comp142475_c0_seq1 318 659 +;locus=RLOC_00000298
ChrX	stalkie_big_nohaplotig	exon	5821263	5821423	98	+	.	Parent=comp142475_c0_seq1.mrna1;Target=comp142475_c0_seq1 1 161 +
ChrX	stalkie_big_nohaplotig	exon	5821491	5822227	99	+	.	Parent=comp142475_c0_seq1.mrna1;Target=comp142475_c0_seq1 162 898 +
ChrX	stalkie_big_nohaplotig	exon	6972623	6972636	100	+	.	Parent=comp142475_c0_seq1.mrna1;Target=comp142475_c0_seq1 899 912 +
ChrX	stalkie_big_nohaplotig	exon	6986545	6986550	100	+	.	Parent=comp142475_c0_seq1.mrna1;Target=comp142475_c0_seq1 913 918 +
ChrX	stalkie_big_nohaplotig	exon	6988479	6988484	100	+	.	Parent=comp142475_c0_seq1.mrna1;Target=comp142475_c0_seq1 919 924 +
ChrX	stalkie_big_nohaplotig	CDS	5821647	5821988	.	+	0	Parent=comp142475_c0_seq1.mrna1
ChrX	gffcl	locus	5832346	5833707	.	-	.	ID=RLOC_00000299;geneIDs=FBgn0033610.1.path1;transcripts=FBgn0033610.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5832346	5833707	.	-	.	ID=FBgn0033610.1.mrna1;geneID=FBgn0033610.1.path1;Name=FBgn0033610.1;Dir=sensecoverage=100.0;identity=99.6;matches=1070;mismatches=3;indels=1;unknowns=0;locus=RLOC_00000299
ChrX	stalkie_big_nohaplotig	exon	5832346	5832698	99	-	.	Parent=FBgn0033610.1.mrna1;Target=FBgn0033610.1 722 1074 +
ChrX	stalkie_big_nohaplotig	exon	5832829	5833006	100	-	.	Parent=FBgn0033610.1.mrna1;Target=FBgn0033610.1 544 721 +
ChrX	stalkie_big_nohaplotig	exon	5833091	5833505	99	-	.	Parent=FBgn0033610.1.mrna1;Target=FBgn0033610.1 129 543 +
ChrX	stalkie_big_nohaplotig	exon	5833581	5833707	99	-	.	Parent=FBgn0033610.1.mrna1;Target=FBgn0033610.1 1 128 +
ChrX	stalkie_big_nohaplotig	CDS	5832346	5832698	.	-	2	Parent=FBgn0033610.1.mrna1;Target=FBgn0033610.1 722 1074 +
ChrX	stalkie_big_nohaplotig	CDS	5832829	5833006	.	-	0	Parent=FBgn0033610.1.mrna1;Target=FBgn0033610.1 544 721 +
ChrX	stalkie_big_nohaplotig	CDS	5833091	5833505	.	-	1	Parent=FBgn0033610.1.mrna1;Target=FBgn0033610.1 129 543 +
ChrX	stalkie_big_nohaplotig	CDS	5833581	5833651	.	-	0	Parent=FBgn0033610.1.mrna1;Target=FBgn0033610.1 58 128 +
ChrX	gffcl	locus	5835616	5836978	.	+	.	ID=RLOC_00000300;geneIDs=FBgn0033610.1.path2;transcripts=FBgn0033610.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	5835616	5836978	.	+	.	ID=FBgn0033610.1.mrna2;geneID=FBgn0033610.1.path2;Name=FBgn0033610.1;Dir=sensecoverage=100.0;identity=99.6;matches=1070;mismatches=3;indels=1;unknowns=0;locus=RLOC_00000300
ChrX	stalkie_big_nohaplotig	exon	5835616	5835742	99	+	.	Parent=FBgn0033610.1.mrna2;Target=FBgn0033610.1 1 128 +
ChrX	stalkie_big_nohaplotig	exon	5835818	5836232	99	+	.	Parent=FBgn0033610.1.mrna2;Target=FBgn0033610.1 129 543 +
ChrX	stalkie_big_nohaplotig	exon	5836317	5836494	100	+	.	Parent=FBgn0033610.1.mrna2;Target=FBgn0033610.1 544 721 +
ChrX	stalkie_big_nohaplotig	exon	5836626	5836978	99	+	.	Parent=FBgn0033610.1.mrna2;Target=FBgn0033610.1 722 1074 +
ChrX	stalkie_big_nohaplotig	CDS	5835672	5835742	.	+	0	Parent=FBgn0033610.1.mrna2;Target=FBgn0033610.1 58 128 +
ChrX	stalkie_big_nohaplotig	CDS	5835818	5836232	.	+	1	Parent=FBgn0033610.1.mrna2;Target=FBgn0033610.1 129 543 +
ChrX	stalkie_big_nohaplotig	CDS	5836317	5836494	.	+	0	Parent=FBgn0033610.1.mrna2;Target=FBgn0033610.1 544 721 +
ChrX	stalkie_big_nohaplotig	CDS	5836626	5836978	.	+	2	Parent=FBgn0033610.1.mrna2;Target=FBgn0033610.1 722 1074 +
ChrX	gffcl	locus	5869649	5870414	.	+	.	ID=RLOC_00000301;geneIDs=comp156486_c0_seq1.path1;transcripts=comp156486_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5869649	5870414	.	+	.	ID=comp156486_c0_seq1.mrna1;geneID=comp156486_c0_seq1.path1;Name=comp156486_c0_seq1;Dir=sensecoverage=99.4;identity=99.3;matches=691;mismatches=5;indels=0;unknowns=0;locus=RLOC_00000301
ChrX	stalkie_big_nohaplotig	exon	5869649	5869976	98	+	.	Parent=comp156486_c0_seq1.mrna1;Target=comp156486_c0_seq1 4 331 +
ChrX	stalkie_big_nohaplotig	exon	5870047	5870414	99	+	.	Parent=comp156486_c0_seq1.mrna1;Target=comp156486_c0_seq1 332 699 +
ChrX	stalkie_big_nohaplotig	CDS	5869796	5869976	.	+	0	Parent=comp156486_c0_seq1.mrna1;Target=comp156486_c0_seq1 151 331 +
ChrX	stalkie_big_nohaplotig	CDS	5870047	5870318	.	+	2	Parent=comp156486_c0_seq1.mrna1;Target=comp156486_c0_seq1 332 603 +
ChrX	gffcl	locus	5883734	5884700	.	-	.	ID=RLOC_00000302;geneIDs=comp115115_c0_seq1.path1;transcripts=comp115115_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5883734	5884700	.	-	.	ID=comp115115_c0_seq1.mrna1;geneID=comp115115_c0_seq1.path1;Name=comp115115_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=581;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000302
ChrX	stalkie_big_nohaplotig	exon	5883734	5883969	99	-	.	Parent=comp115115_c0_seq1.mrna1;Target=comp115115_c0_seq1 1 236 -
ChrX	stalkie_big_nohaplotig	exon	5884031	5884211	98	-	.	Parent=comp115115_c0_seq1.mrna1;Target=comp115115_c0_seq1 237 417 -
ChrX	stalkie_big_nohaplotig	exon	5884534	5884700	100	-	.	Parent=comp115115_c0_seq1.mrna1;Target=comp115115_c0_seq1 418 584 -
ChrX	stalkie_big_nohaplotig	CDS	5883868	5883969	.	-	0	Parent=comp115115_c0_seq1.mrna1;Target=comp115115_c0_seq1 135 236 .
ChrX	stalkie_big_nohaplotig	CDS	5884031	5884211	.	-	1	Parent=comp115115_c0_seq1.mrna1;Target=comp115115_c0_seq1 237 417 .
ChrX	stalkie_big_nohaplotig	CDS	5884534	5884544	.	-	0	Parent=comp115115_c0_seq1.mrna1;Target=comp115115_c0_seq1 418 428 .
ChrX	gffcl	locus	5907503	5908930	.	+	.	ID=RLOC_00000303;geneIDs=comp158160_c0_seq1.path1;transcripts=comp158160_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5907503	5908930	.	+	.	ID=comp158160_c0_seq1.mrna1;geneID=comp158160_c0_seq1.path1;Name=comp158160_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=1396;mismatches=32;indels=3;unknowns=0;Target=comp158160_c0_seq1 1431 1 .;CDS_Target=comp158160_c0_seq1 879 757 .;locus=RLOC_00000303
ChrX	stalkie_big_nohaplotig	exon	5907503	5908930	97	+	.	Parent=comp158160_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	5908256	5908378	.	+	0	Parent=comp158160_c0_seq1.mrna1
ChrX	gffcl	locus	5921641	5922347	.	-	.	ID=RLOC_00000304;geneIDs=comp161361_c3_seq1.path2;transcripts=comp161361_c3_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	5921641	5922347	.	-	.	ID=comp161361_c3_seq1.mrna2;geneID=comp161361_c3_seq1.path2;Name=comp161361_c3_seq1;Dir=indeterminatecoverage=86.5;identity=99.4;matches=703;mismatches=4;indels=0;unknowns=0;Target=comp161361_c3_seq1 707 1 .;CDS_Target=comp161361_c3_seq1 111 1 .;locus=RLOC_00000304
ChrX	stalkie_big_nohaplotig	exon	5921641	5922347	99	-	.	Parent=comp161361_c3_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	5922237	5922347	.	-	0	Parent=comp161361_c3_seq1.mrna2
ChrX	gffcl	locus	5927613	5928104	.	-	.	ID=RLOC_00000305;geneIDs=comp148217_c0_seq1.path2;transcripts=comp148217_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	5927613	5928104	.	-	.	ID=comp148217_c0_seq1.mrna2;geneID=comp148217_c0_seq1.path2;Name=comp148217_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=490;mismatches=2;indels=0;unknowns=0;Target=comp148217_c0_seq1 492 1 .;CDS_Target=comp148217_c0_seq1 491 198 .;locus=RLOC_00000305
ChrX	stalkie_big_nohaplotig	exon	5927613	5928104	99	-	.	Parent=comp148217_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	5927614	5927907	.	-	0	Parent=comp148217_c0_seq1.mrna2
ChrX	gffcl	locus	5955627	5959286	.	+	.	ID=RLOC_00000306;geneIDs=FBgn0261089.1.path1;transcripts=FBgn0261089.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5955627	5959286	.	+	.	ID=FBgn0261089.1.mrna1;geneID=FBgn0261089.1.path1;Name=FBgn0261089.1;Dir=sensecoverage=100.0;identity=99.5;matches=1480;mismatches=8;indels=0;unknowns=0;locus=RLOC_00000306
ChrX	stalkie_big_nohaplotig	exon	5955627	5955841	98	+	.	Parent=FBgn0261089.1.mrna1;Target=FBgn0261089.1 1 215 +
ChrX	stalkie_big_nohaplotig	exon	5955911	5956280	99	+	.	Parent=FBgn0261089.1.mrna1;Target=FBgn0261089.1 216 585 +
ChrX	stalkie_big_nohaplotig	exon	5956341	5956454	100	+	.	Parent=FBgn0261089.1.mrna1;Target=FBgn0261089.1 586 699 +
ChrX	stalkie_big_nohaplotig	exon	5956530	5956650	100	+	.	Parent=FBgn0261089.1.mrna1;Target=FBgn0261089.1 700 820 +
ChrX	stalkie_big_nohaplotig	exon	5958464	5958654	99	+	.	Parent=FBgn0261089.1.mrna1;Target=FBgn0261089.1 821 1011 +
ChrX	stalkie_big_nohaplotig	exon	5958731	5959034	100	+	.	Parent=FBgn0261089.1.mrna1;Target=FBgn0261089.1 1012 1315 +
ChrX	stalkie_big_nohaplotig	exon	5959114	5959286	100	+	.	Parent=FBgn0261089.1.mrna1;Target=FBgn0261089.1 1316 1488 +
ChrX	stalkie_big_nohaplotig	CDS	5955627	5955841	.	+	0	Parent=FBgn0261089.1.mrna1;Target=FBgn0261089.1 1 215 +
ChrX	stalkie_big_nohaplotig	CDS	5955911	5956280	.	+	1	Parent=FBgn0261089.1.mrna1;Target=FBgn0261089.1 216 585 +
ChrX	stalkie_big_nohaplotig	CDS	5956341	5956454	.	+	0	Parent=FBgn0261089.1.mrna1;Target=FBgn0261089.1 586 699 +
ChrX	stalkie_big_nohaplotig	CDS	5956530	5956650	.	+	0	Parent=FBgn0261089.1.mrna1;Target=FBgn0261089.1 700 820 +
ChrX	stalkie_big_nohaplotig	CDS	5958464	5958654	.	+	2	Parent=FBgn0261089.1.mrna1;Target=FBgn0261089.1 821 1011 +
ChrX	stalkie_big_nohaplotig	CDS	5958731	5959034	.	+	0	Parent=FBgn0261089.1.mrna1;Target=FBgn0261089.1 1012 1315 +
ChrX	stalkie_big_nohaplotig	CDS	5959114	5959286	.	+	2	Parent=FBgn0261089.1.mrna1;Target=FBgn0261089.1 1316 1488 +
ChrX	gffcl	locus	5961077	5961854	.	-	.	ID=RLOC_00000307;geneIDs=comp148602_c0_seq1.path1;transcripts=comp148602_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5961077	5961854	.	-	.	ID=comp148602_c0_seq1.mrna1;geneID=comp148602_c0_seq1.path1;Name=comp148602_c0_seq1;Dir=indeterminatecoverage=96.6;identity=98.2;matches=775;mismatches=3;indels=11;unknowns=0;Target=comp148602_c0_seq1 813 25 .;CDS_Target=comp148602_c0_seq1 231 94 .;locus=RLOC_00000307
ChrX	stalkie_big_nohaplotig	exon	5961077	5961854	98	-	.	Parent=comp148602_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	5961648	5961785	.	-	0	Parent=comp148602_c0_seq1.mrna1
ChrX	gffcl	locus	5961858	5962113	.	+	.	ID=RLOC_00000308;geneIDs=comp934867_c0_seq1.path1;transcripts=comp934867_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5961858	5962113	.	+	.	ID=comp934867_c0_seq1.mrna1;geneID=comp934867_c0_seq1.path1;Name=comp934867_c0_seq1;Dir=indeterminatecoverage=99.2;identity=97.7;matches=250;mismatches=5;indels=1;unknowns=0;Target=comp934867_c0_seq1 255 1 .;CDS_Target=comp934867_c0_seq1 27 1 .;locus=RLOC_00000308
ChrX	stalkie_big_nohaplotig	exon	5961858	5962113	97	+	.	Parent=comp934867_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	5961858	5961885	.	+	0	Parent=comp934867_c0_seq1.mrna1
ChrX	gffcl	locus	5964787	5966537	.	+	.	ID=RLOC_00000309;geneIDs=comp135634_c0_seq1.path1;transcripts=comp135634_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5964787	5966537	.	+	.	ID=comp135634_c0_seq1.mrna1;geneID=comp135634_c0_seq1.path1;Name=comp135634_c0_seq1;Dir=sensecoverage=99.8;identity=99.1;matches=657;mismatches=6;indels=0;unknowns=0;locus=RLOC_00000309
ChrX	stalkie_big_nohaplotig	exon	5964787	5965083	98	+	.	Parent=comp135634_c0_seq1.mrna1;Target=comp135634_c0_seq1 2 298 +
ChrX	stalkie_big_nohaplotig	exon	5965147	5965290	100	+	.	Parent=comp135634_c0_seq1.mrna1;Target=comp135634_c0_seq1 299 442 +
ChrX	stalkie_big_nohaplotig	exon	5966316	5966537	98	+	.	Parent=comp135634_c0_seq1.mrna1;Target=comp135634_c0_seq1 443 664 +
ChrX	stalkie_big_nohaplotig	CDS	5964958	5965083	.	+	0	Parent=comp135634_c0_seq1.mrna1;Target=comp135634_c0_seq1 173 298 +
ChrX	stalkie_big_nohaplotig	CDS	5965147	5965239	.	+	0	Parent=comp135634_c0_seq1.mrna1;Target=comp135634_c0_seq1 299 391 +
ChrX	gffcl	locus	5970739	5973593	.	+	.	ID=RLOC_00000310;geneIDs=comp170739_c0_seq1.path1;transcripts=comp170739_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5970739	5973593	.	+	.	ID=comp170739_c0_seq1.mrna1;geneID=comp170739_c0_seq1.path1;Name=comp170739_c0_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=676;mismatches=1;indels=3;unknowns=0;locus=RLOC_00000310
ChrX	stalkie_big_nohaplotig	exon	5970739	5971065	98	+	.	Parent=comp170739_c0_seq1.mrna1;Target=comp170739_c0_seq1 1 324 +
ChrX	stalkie_big_nohaplotig	exon	5971124	5971212	100	+	.	Parent=comp170739_c0_seq1.mrna1;Target=comp170739_c0_seq1 325 413 +
ChrX	stalkie_big_nohaplotig	exon	5971373	5971451	100	+	.	Parent=comp170739_c0_seq1.mrna1;Target=comp170739_c0_seq1 414 492 +
ChrX	stalkie_big_nohaplotig	exon	5973409	5973593	100	+	.	Parent=comp170739_c0_seq1.mrna1;Target=comp170739_c0_seq1 493 677 +
ChrX	stalkie_big_nohaplotig	CDS	5970901	5971065	.	+	0	Parent=comp170739_c0_seq1.mrna1;Target=comp170739_c0_seq1 160 324 +
ChrX	stalkie_big_nohaplotig	CDS	5971124	5971177	.	+	0	Parent=comp170739_c0_seq1.mrna1;Target=comp170739_c0_seq1 325 378 +
ChrX	gffcl	locus	5973761	6004956	.	+	.	ID=RLOC_00000311;geneIDs=comp161361_c3_seq1.path1;transcripts=comp161361_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5973761	6004956	.	+	.	ID=comp161361_c3_seq1.mrna1;geneID=comp161361_c3_seq1.path1;Name=comp161361_c3_seq1;Dir=indeterminatecoverage=88.5;identity=99.3;matches=719;mismatches=4;indels=1;unknowns=0;Target=comp161361_c3_seq1 111 1 .;locus=RLOC_00000311
ChrX	stalkie_big_nohaplotig	exon	5973761	5974466	99	+	.	Parent=comp161361_c3_seq1.mrna1;Target=comp161361_c3_seq1 706 1 .
ChrX	stalkie_big_nohaplotig	exon	5999354	5999357	100	+	.	Parent=comp161361_c3_seq1.mrna1;Target=comp161361_c3_seq1 710 707 .
ChrX	stalkie_big_nohaplotig	exon	6003738	6003739	100	+	.	Parent=comp161361_c3_seq1.mrna1;Target=comp161361_c3_seq1 712 711 .
ChrX	stalkie_big_nohaplotig	exon	6004945	6004956	91	+	.	Parent=comp161361_c3_seq1.mrna1;Target=comp161361_c3_seq1 723 713 .
ChrX	stalkie_big_nohaplotig	CDS	5973761	5973871	.	+	0	Parent=comp161361_c3_seq1.mrna1
ChrX	gffcl	locus	5974646	5975137	.	+	.	ID=RLOC_00000312;geneIDs=comp148217_c0_seq1.path1;transcripts=comp148217_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5974646	5975137	.	+	.	ID=comp148217_c0_seq1.mrna1;geneID=comp148217_c0_seq1.path1;Name=comp148217_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=492;mismatches=0;indels=0;unknowns=0;Target=comp148217_c0_seq1 492 1 .;CDS_Target=comp148217_c0_seq1 491 198 .;locus=RLOC_00000312
ChrX	stalkie_big_nohaplotig	exon	5974646	5975137	100	+	.	Parent=comp148217_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	5974843	5975136	.	+	0	Parent=comp148217_c0_seq1.mrna1
ChrX	gffcl	locus	5993434	5994421	.	-	.	ID=RLOC_00000313;geneIDs=comp151648_c3_seq1.path1;transcripts=comp151648_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	5993434	5994421	.	-	.	ID=comp151648_c3_seq1.mrna1;geneID=comp151648_c3_seq1.path1;Name=comp151648_c3_seq1;Dir=sensecoverage=81.9;identity=94.8;matches=895;mismatches=30;indels=19;unknowns=0;Target=comp151648_c3_seq1 26 772 +;locus=RLOC_00000313
ChrX	stalkie_big_nohaplotig	exon	5993434	5993543	89	-	.	Parent=comp151648_c3_seq1.mrna1;Target=comp151648_c3_seq1 856 965 +
ChrX	stalkie_big_nohaplotig	exon	5993605	5994421	95	-	.	Parent=comp151648_c3_seq1.mrna1;Target=comp151648_c3_seq1 24 855 +
ChrX	stalkie_big_nohaplotig	CDS	5993690	5994419	.	-	0	Parent=comp151648_c3_seq1.mrna1
ChrX	gffcl	locus	6016980	6017226	.	-	.	ID=RLOC_00000314;geneIDs=comp147300_c0_seq1.path1;transcripts=comp147300_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6016980	6017226	.	-	.	ID=comp147300_c0_seq1.mrna1;geneID=comp147300_c0_seq1.path1;Name=comp147300_c0_seq1;Dir=indeterminatecoverage=31.1;identity=99.6;matches=246;mismatches=1;indels=0;unknowns=0;Target=comp147300_c0_seq1 247 1 .;CDS_Target=comp147300_c0_seq1 80 3 .;locus=RLOC_00000314
ChrX	stalkie_big_nohaplotig	exon	6016980	6017226	99	-	.	Parent=comp147300_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6017147	6017224	.	-	0	Parent=comp147300_c0_seq1.mrna1
ChrX	gffcl	locus	6051970	6052443	.	+	.	ID=RLOC_00000315;geneIDs=FBgn0032652.1.path1;transcripts=FBgn0032652.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6051970	6052443	.	+	.	ID=FBgn0032652.1.mrna1;geneID=FBgn0032652.1.path1;Name=FBgn0032652.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=474;mismatches=0;indels=0;unknowns=0;Target=FBgn0032652.1 474 1 .;locus=RLOC_00000315
ChrX	stalkie_big_nohaplotig	exon	6051970	6052443	100	+	.	Parent=FBgn0032652.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6051970	6052443	.	+	0	Parent=FBgn0032652.1.mrna1
ChrX	gffcl	locus	6052804	6053766	.	-	.	ID=RLOC_00000316;geneIDs=comp150308_c0_seq1.path1;transcripts=comp150308_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6052804	6053766	.	-	.	ID=comp150308_c0_seq1.mrna1;geneID=comp150308_c0_seq1.path1;Name=comp150308_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.2;matches=907;mismatches=7;indels=49;unknowns=0;Target=comp150308_c0_seq1 914 1 .;CDS_Target=comp150308_c0_seq1 460 356 .;locus=RLOC_00000316
ChrX	stalkie_big_nohaplotig	exon	6052804	6053766	94	-	.	Parent=comp150308_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6053307	6053411	.	-	0	Parent=comp150308_c0_seq1.mrna1
ChrX	gffcl	locus	6053807	6055035	.	-	.	ID=RLOC_00000317;geneIDs=comp154764_c0_seq1.path1;transcripts=comp154764_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6053807	6055035	.	-	.	ID=comp154764_c0_seq1.mrna1;geneID=comp154764_c0_seq1.path1;Name=comp154764_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.7;matches=1225;mismatches=4;indels=0;unknowns=0;Target=comp154764_c0_seq1 1229 1 .;CDS_Target=comp154764_c0_seq1 980 852 .;locus=RLOC_00000317
ChrX	stalkie_big_nohaplotig	exon	6053807	6055035	99	-	.	Parent=comp154764_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6054056	6054184	.	-	0	Parent=comp154764_c0_seq1.mrna1
ChrX	gffcl	locus	6055236	6055535	.	-	.	ID=RLOC_00000318;geneIDs=comp118413_c0_seq1.path1;transcripts=comp118413_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6055236	6055535	.	-	.	ID=comp118413_c0_seq1.mrna1;geneID=comp118413_c0_seq1.path1;Name=comp118413_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=298;mismatches=2;indels=0;unknowns=0;Target=comp118413_c0_seq1 300 1 .;CDS_Target=comp118413_c0_seq1 55 2 .;locus=RLOC_00000318
ChrX	stalkie_big_nohaplotig	exon	6055236	6055535	99	-	.	Parent=comp118413_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6055481	6055534	.	-	0	Parent=comp118413_c0_seq1.mrna1
ChrX	gffcl	locus	6057541	6057849	.	-	.	ID=RLOC_00000319;geneIDs=comp135724_c0_seq1.path1;transcripts=comp135724_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6057541	6057849	.	-	.	ID=comp135724_c0_seq1.mrna1;geneID=comp135724_c0_seq1.path1;Name=comp135724_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=309;mismatches=0;indels=0;unknowns=0;Target=comp135724_c0_seq1 309 1 .;CDS_Target=comp135724_c0_seq1 79 2 .;locus=RLOC_00000319
ChrX	stalkie_big_nohaplotig	exon	6057541	6057849	100	-	.	Parent=comp135724_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6057771	6057848	.	-	0	Parent=comp135724_c0_seq1.mrna1
ChrX	gffcl	locus	6058598	6059012	.	-	.	ID=RLOC_00000320;geneIDs=comp49304_c0_seq1.path1;transcripts=comp49304_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6058598	6059012	.	-	.	ID=comp49304_c0_seq1.mrna1;geneID=comp49304_c0_seq1.path1;Name=comp49304_c0_seq1;Dir=indeterminatecoverage=74.0;identity=100.0;matches=415;mismatches=0;indels=0;unknowns=0;Target=comp49304_c0_seq1 415 1 .;CDS_Target=comp49304_c0_seq1 89 3 .;locus=RLOC_00000320
ChrX	stalkie_big_nohaplotig	exon	6058598	6059012	100	-	.	Parent=comp49304_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6058924	6059010	.	-	0	Parent=comp49304_c0_seq1.mrna1
ChrX	gffcl	locus	6060465	6061900	.	+	.	ID=RLOC_00000321;geneIDs=comp135346_c0_seq1.path1,comp149545_c0_seq1.path1;transcripts=comp149545_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6061095	6061900	.	+	.	ID=comp149545_c0_seq1.mrna1;geneID=comp149545_c0_seq1.path1;Name=comp149545_c0_seq1;Dir=indeterminatecoverage=94.3;identity=98.4;matches=793;mismatches=13;indels=0;unknowns=0;Target=comp149545_c0_seq1 855 50 .;CDS_Target=comp149545_c0_seq1 274 167 .;locus=RLOC_00000321
ChrX	stalkie_big_nohaplotig	exon	6061095	6061900	98	+	.	Parent=comp149545_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6061212	6061319	.	+	0	Parent=comp149545_c0_seq1.mrna1
ChrX	gffcl	locus	6062525	6063353	.	-	.	ID=RLOC_00000322;geneIDs=FBgn0032651.1.path1;transcripts=FBgn0032651.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6062525	6063353	.	-	.	ID=FBgn0032651.1.mrna1;geneID=FBgn0032651.1.path1;Name=FBgn0032651.1;Dir=sensecoverage=100.0;identity=99.9;matches=692;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000322
ChrX	stalkie_big_nohaplotig	exon	6062525	6062645	100	-	.	Parent=FBgn0032651.1.mrna1;Target=FBgn0032651.1 573 693 +
ChrX	stalkie_big_nohaplotig	exon	6062702	6062866	100	-	.	Parent=FBgn0032651.1.mrna1;Target=FBgn0032651.1 408 572 +
ChrX	stalkie_big_nohaplotig	exon	6062947	6063353	99	-	.	Parent=FBgn0032651.1.mrna1;Target=FBgn0032651.1 1 407 +
ChrX	stalkie_big_nohaplotig	CDS	6062525	6062645	.	-	1	Parent=FBgn0032651.1.mrna1;Target=FBgn0032651.1 573 693 +
ChrX	stalkie_big_nohaplotig	CDS	6062702	6062866	.	-	1	Parent=FBgn0032651.1.mrna1;Target=FBgn0032651.1 408 572 +
ChrX	stalkie_big_nohaplotig	CDS	6062947	6063353	.	-	0	Parent=FBgn0032651.1.mrna1;Target=FBgn0032651.1 1 407 +
ChrX	gffcl	locus	6201670	6202385	.	+	.	ID=RLOC_00000323;geneIDs=comp134945_c0_seq1.path1;transcripts=comp134945_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6201670	6202385	.	+	.	ID=comp134945_c0_seq1.mrna1;geneID=comp134945_c0_seq1.path1;Name=comp134945_c0_seq1;Dir=indeterminatecoverage=97.6;identity=98.6;matches=707;mismatches=9;indels=1;unknowns=0;Target=comp134945_c0_seq1 726 10 .;CDS_Target=comp134945_c0_seq1 567 52 .;locus=RLOC_00000323
ChrX	stalkie_big_nohaplotig	exon	6201670	6202385	98	+	.	Parent=comp134945_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6201712	6202227	.	+	0	Parent=comp134945_c0_seq1.mrna1
ChrX	gffcl	locus	6203140	6204796	.	-	.	ID=RLOC_00000324;geneIDs=comp126853_c0_seq1.path1;transcripts=comp126853_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6203140	6204796	.	-	.	ID=comp126853_c0_seq1.mrna1;geneID=comp126853_c0_seq1.path1;Name=comp126853_c0_seq1;Dir=sensecoverage=97.2;identity=99.8;matches=810;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000324
ChrX	stalkie_big_nohaplotig	exon	6203140	6203335	98	-	.	Parent=comp126853_c0_seq1.mrna1;Target=comp126853_c0_seq1 626 821 +
ChrX	stalkie_big_nohaplotig	exon	6203403	6203521	100	-	.	Parent=comp126853_c0_seq1.mrna1;Target=comp126853_c0_seq1 507 625 +
ChrX	stalkie_big_nohaplotig	exon	6204018	6204175	100	-	.	Parent=comp126853_c0_seq1.mrna1;Target=comp126853_c0_seq1 349 506 +
ChrX	stalkie_big_nohaplotig	exon	6204241	6204327	100	-	.	Parent=comp126853_c0_seq1.mrna1;Target=comp126853_c0_seq1 262 348 +
ChrX	stalkie_big_nohaplotig	exon	6204545	6204796	100	-	.	Parent=comp126853_c0_seq1.mrna1;Target=comp126853_c0_seq1 10 261 +
ChrX	stalkie_big_nohaplotig	CDS	6203316	6203335	.	-	2	Parent=comp126853_c0_seq1.mrna1;Target=comp126853_c0_seq1 626 645 +
ChrX	stalkie_big_nohaplotig	CDS	6203403	6203521	.	-	1	Parent=comp126853_c0_seq1.mrna1;Target=comp126853_c0_seq1 507 625 +
ChrX	stalkie_big_nohaplotig	CDS	6204018	6204118	.	-	0	Parent=comp126853_c0_seq1.mrna1;Target=comp126853_c0_seq1 406 506 +
ChrX	gffcl	locus	6283321	6320314	.	-	.	ID=RLOC_00000325;geneIDs=FBgn0013810.1.path1;transcripts=FBgn0013810.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6283321	6320314	.	-	.	ID=FBgn0013810.1.mrna1;geneID=FBgn0013810.1.path1;Name=FBgn0013810.1;Dir=sensecoverage=100.0;identity=99.9;matches=10884;mismatches=15;indels=0;unknowns=0;locus=RLOC_00000325
ChrX	stalkie_big_nohaplotig	exon	6283321	6284060	99	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 10160 10899 +
ChrX	stalkie_big_nohaplotig	exon	6284131	6284509	100	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 9781 10159 +
ChrX	stalkie_big_nohaplotig	exon	6293149	6293327	100	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 9602 9780 +
ChrX	stalkie_big_nohaplotig	exon	6293476	6293891	99	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 9186 9601 +
ChrX	stalkie_big_nohaplotig	exon	6293965	6294252	99	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 8898 9185 +
ChrX	stalkie_big_nohaplotig	exon	6300749	6301114	100	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 8532 8897 +
ChrX	stalkie_big_nohaplotig	exon	6301253	6301356	100	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 8428 8531 +
ChrX	stalkie_big_nohaplotig	exon	6302442	6303047	100	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 7822 8427 +
ChrX	stalkie_big_nohaplotig	exon	6303125	6303254	99	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 7692 7821 +
ChrX	stalkie_big_nohaplotig	exon	6303315	6303661	99	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 7345 7691 +
ChrX	stalkie_big_nohaplotig	exon	6304243	6304425	100	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 7162 7344 +
ChrX	stalkie_big_nohaplotig	exon	6305081	6305867	99	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 6375 7161 +
ChrX	stalkie_big_nohaplotig	exon	6305940	6307453	99	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 4861 6374 +
ChrX	stalkie_big_nohaplotig	exon	6307515	6307628	100	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 4747 4860 +
ChrX	stalkie_big_nohaplotig	exon	6307688	6308134	99	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 4300 4746 +
ChrX	stalkie_big_nohaplotig	exon	6308202	6308348	100	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 4153 4299 +
ChrX	stalkie_big_nohaplotig	exon	6308422	6308802	100	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 3772 4152 +
ChrX	stalkie_big_nohaplotig	exon	6308859	6309017	100	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 3613 3771 +
ChrX	stalkie_big_nohaplotig	exon	6309081	6309557	100	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 3136 3612 +
ChrX	stalkie_big_nohaplotig	exon	6309909	6310040	100	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 3004 3135 +
ChrX	stalkie_big_nohaplotig	exon	6310144	6310297	100	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 2850 3003 +
ChrX	stalkie_big_nohaplotig	exon	6310374	6310786	100	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 2437 2849 +
ChrX	stalkie_big_nohaplotig	exon	6311178	6311762	100	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 1852 2436 +
ChrX	stalkie_big_nohaplotig	exon	6311824	6312528	100	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 1147 1851 +
ChrX	stalkie_big_nohaplotig	exon	6312580	6312813	100	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 913 1146 +
ChrX	stalkie_big_nohaplotig	exon	6312892	6313051	100	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 753 912 +
ChrX	stalkie_big_nohaplotig	exon	6316929	6317144	100	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 537 752 +
ChrX	stalkie_big_nohaplotig	exon	6317213	6317432	100	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 317 536 +
ChrX	stalkie_big_nohaplotig	exon	6317544	6317831	98	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 29 316 +
ChrX	stalkie_big_nohaplotig	exon	6320287	6320314	100	-	.	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 1 28 +
ChrX	stalkie_big_nohaplotig	CDS	6283321	6284060	.	-	2	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 10160 10899 +
ChrX	stalkie_big_nohaplotig	CDS	6284131	6284509	.	-	0	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 9781 10159 +
ChrX	stalkie_big_nohaplotig	CDS	6293149	6293327	.	-	2	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 9602 9780 +
ChrX	stalkie_big_nohaplotig	CDS	6293476	6293891	.	-	1	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 9186 9601 +
ChrX	stalkie_big_nohaplotig	CDS	6293965	6294252	.	-	1	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 8898 9185 +
ChrX	stalkie_big_nohaplotig	CDS	6300749	6301114	.	-	1	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 8532 8897 +
ChrX	stalkie_big_nohaplotig	CDS	6301253	6301356	.	-	0	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 8428 8531 +
ChrX	stalkie_big_nohaplotig	CDS	6302442	6303047	.	-	0	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 7822 8427 +
ChrX	stalkie_big_nohaplotig	CDS	6303125	6303254	.	-	1	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 7692 7821 +
ChrX	stalkie_big_nohaplotig	CDS	6303315	6303661	.	-	0	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 7345 7691 +
ChrX	stalkie_big_nohaplotig	CDS	6304243	6304425	.	-	0	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 7162 7344 +
ChrX	stalkie_big_nohaplotig	CDS	6305081	6305867	.	-	1	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 6375 7161 +
ChrX	stalkie_big_nohaplotig	CDS	6305940	6307453	.	-	0	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 4861 6374 +
ChrX	stalkie_big_nohaplotig	CDS	6307515	6307628	.	-	0	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 4747 4860 +
ChrX	stalkie_big_nohaplotig	CDS	6307688	6308134	.	-	0	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 4300 4746 +
ChrX	stalkie_big_nohaplotig	CDS	6308202	6308348	.	-	0	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 4153 4299 +
ChrX	stalkie_big_nohaplotig	CDS	6308422	6308802	.	-	0	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 3772 4152 +
ChrX	stalkie_big_nohaplotig	CDS	6308859	6309017	.	-	0	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 3613 3771 +
ChrX	stalkie_big_nohaplotig	CDS	6309081	6309557	.	-	0	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 3136 3612 +
ChrX	stalkie_big_nohaplotig	CDS	6309909	6310040	.	-	0	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 3004 3135 +
ChrX	stalkie_big_nohaplotig	CDS	6310144	6310297	.	-	1	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 2850 3003 +
ChrX	stalkie_big_nohaplotig	CDS	6310374	6310786	.	-	0	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 2437 2849 +
ChrX	stalkie_big_nohaplotig	CDS	6311178	6311762	.	-	0	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 1852 2436 +
ChrX	stalkie_big_nohaplotig	CDS	6311824	6312528	.	-	0	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 1147 1851 +
ChrX	stalkie_big_nohaplotig	CDS	6312580	6312813	.	-	0	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 913 1146 +
ChrX	stalkie_big_nohaplotig	CDS	6312892	6313051	.	-	1	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 753 912 +
ChrX	stalkie_big_nohaplotig	CDS	6316929	6317144	.	-	1	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 537 752 +
ChrX	stalkie_big_nohaplotig	CDS	6317213	6317432	.	-	2	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 317 536 +
ChrX	stalkie_big_nohaplotig	CDS	6317544	6317831	.	-	2	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 29 316 +
ChrX	stalkie_big_nohaplotig	CDS	6320287	6320314	.	-	0	Parent=FBgn0013810.1.mrna1;Target=FBgn0013810.1 1 28 +
ChrX	gffcl	locus	6320187	6322907	.	+	.	ID=RLOC_00000326;geneIDs=FBgn0032646.1.path1;transcripts=FBgn0032646.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6320187	6322907	.	+	.	ID=FBgn0032646.1.mrna1;geneID=FBgn0032646.1.path1;Name=FBgn0032646.1;Dir=sensecoverage=100.0;identity=99.8;matches=1036;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000326
ChrX	stalkie_big_nohaplotig	exon	6320187	6320225	100	+	.	Parent=FBgn0032646.1.mrna1;Target=FBgn0032646.1 1 39 +
ChrX	stalkie_big_nohaplotig	exon	6320546	6320785	100	+	.	Parent=FBgn0032646.1.mrna1;Target=FBgn0032646.1 40 279 +
ChrX	stalkie_big_nohaplotig	exon	6320864	6321112	99	+	.	Parent=FBgn0032646.1.mrna1;Target=FBgn0032646.1 280 528 +
ChrX	stalkie_big_nohaplotig	exon	6322398	6322907	100	+	.	Parent=FBgn0032646.1.mrna1;Target=FBgn0032646.1 529 1038 +
ChrX	stalkie_big_nohaplotig	CDS	6320187	6320225	.	+	0	Parent=FBgn0032646.1.mrna1;Target=FBgn0032646.1 1 39 +
ChrX	stalkie_big_nohaplotig	CDS	6320546	6320785	.	+	0	Parent=FBgn0032646.1.mrna1;Target=FBgn0032646.1 40 279 +
ChrX	stalkie_big_nohaplotig	CDS	6320864	6321112	.	+	0	Parent=FBgn0032646.1.mrna1;Target=FBgn0032646.1 280 528 +
ChrX	stalkie_big_nohaplotig	CDS	6322398	6322907	.	+	0	Parent=FBgn0032646.1.mrna1;Target=FBgn0032646.1 529 1038 +
ChrX	gffcl	locus	6352727	6358751	.	+	.	ID=RLOC_00000327;geneIDs=FBgn0003187.1.path1;transcripts=FBgn0003187.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6352727	6358751	.	+	.	ID=FBgn0003187.1.mrna1;geneID=FBgn0003187.1.path1;Name=FBgn0003187.1;Dir=sensecoverage=97.5;identity=100.0;matches=2541;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000327
ChrX	stalkie_big_nohaplotig	exon	6352727	6352936	100	+	.	Parent=FBgn0003187.1.mrna1;Target=FBgn0003187.1 67 276 +
ChrX	stalkie_big_nohaplotig	exon	6353011	6353213	100	+	.	Parent=FBgn0003187.1.mrna1;Target=FBgn0003187.1 277 479 +
ChrX	stalkie_big_nohaplotig	exon	6355135	6355723	100	+	.	Parent=FBgn0003187.1.mrna1;Target=FBgn0003187.1 480 1068 +
ChrX	stalkie_big_nohaplotig	exon	6355794	6356117	100	+	.	Parent=FBgn0003187.1.mrna1;Target=FBgn0003187.1 1069 1392 +
ChrX	stalkie_big_nohaplotig	exon	6356182	6357087	100	+	.	Parent=FBgn0003187.1.mrna1;Target=FBgn0003187.1 1393 2298 +
ChrX	stalkie_big_nohaplotig	exon	6357147	6357344	100	+	.	Parent=FBgn0003187.1.mrna1;Target=FBgn0003187.1 2299 2496 +
ChrX	stalkie_big_nohaplotig	exon	6358641	6358751	100	+	.	Parent=FBgn0003187.1.mrna1;Target=FBgn0003187.1 2497 2607 +
ChrX	stalkie_big_nohaplotig	CDS	6352727	6352936	.	+	0	Parent=FBgn0003187.1.mrna1;Target=FBgn0003187.1 67 276 +
ChrX	stalkie_big_nohaplotig	CDS	6353011	6353213	.	+	0	Parent=FBgn0003187.1.mrna1;Target=FBgn0003187.1 277 479 +
ChrX	stalkie_big_nohaplotig	CDS	6355135	6355723	.	+	1	Parent=FBgn0003187.1.mrna1;Target=FBgn0003187.1 480 1068 +
ChrX	stalkie_big_nohaplotig	CDS	6355794	6356117	.	+	0	Parent=FBgn0003187.1.mrna1;Target=FBgn0003187.1 1069 1392 +
ChrX	stalkie_big_nohaplotig	CDS	6356182	6357087	.	+	0	Parent=FBgn0003187.1.mrna1;Target=FBgn0003187.1 1393 2298 +
ChrX	stalkie_big_nohaplotig	CDS	6357147	6357344	.	+	0	Parent=FBgn0003187.1.mrna1;Target=FBgn0003187.1 2299 2496 +
ChrX	stalkie_big_nohaplotig	CDS	6358641	6358751	.	+	0	Parent=FBgn0003187.1.mrna1;Target=FBgn0003187.1 2497 2607 +
ChrX	gffcl	locus	6367196	6368073	.	-	.	ID=RLOC_00000328;geneIDs=FBgn0032644.1.path1;transcripts=FBgn0032644.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6367196	6368073	.	-	.	ID=FBgn0032644.1.mrna1;geneID=FBgn0032644.1.path1;Name=FBgn0032644.1;Dir=sensecoverage=100.0;identity=99.1;matches=806;mismatches=7;indels=0;unknowns=0;locus=RLOC_00000328
ChrX	stalkie_big_nohaplotig	exon	6367196	6367393	100	-	.	Parent=FBgn0032644.1.mrna1;Target=FBgn0032644.1 616 813 +
ChrX	stalkie_big_nohaplotig	exon	6367459	6368073	98	-	.	Parent=FBgn0032644.1.mrna1;Target=FBgn0032644.1 1 615 +
ChrX	stalkie_big_nohaplotig	CDS	6367196	6367393	.	-	0	Parent=FBgn0032644.1.mrna1;Target=FBgn0032644.1 616 813 +
ChrX	stalkie_big_nohaplotig	CDS	6367459	6368073	.	-	0	Parent=FBgn0032644.1.mrna1;Target=FBgn0032644.1 1 615 +
ChrX	gffcl	locus	6369262	6372528	.	+	.	ID=RLOC_00000329;geneIDs=FBgn0001086.1.path1;transcripts=FBgn0001086.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6369262	6372528	.	+	.	ID=FBgn0001086.1.mrna1;geneID=FBgn0001086.1.path1;Name=FBgn0001086.1;Dir=sensecoverage=100.0;identity=99.6;matches=1562;mismatches=7;indels=0;unknowns=0;locus=RLOC_00000329
ChrX	stalkie_big_nohaplotig	exon	6369262	6369588	99	+	.	Parent=FBgn0001086.1.mrna1;Target=FBgn0001086.1 1 327 +
ChrX	stalkie_big_nohaplotig	exon	6369668	6369962	99	+	.	Parent=FBgn0001086.1.mrna1;Target=FBgn0001086.1 328 622 +
ChrX	stalkie_big_nohaplotig	exon	6371582	6372528	99	+	.	Parent=FBgn0001086.1.mrna1;Target=FBgn0001086.1 623 1569 +
ChrX	stalkie_big_nohaplotig	CDS	6369262	6369588	.	+	0	Parent=FBgn0001086.1.mrna1;Target=FBgn0001086.1 1 327 +
ChrX	stalkie_big_nohaplotig	CDS	6369668	6369962	.	+	0	Parent=FBgn0001086.1.mrna1;Target=FBgn0001086.1 328 622 +
ChrX	stalkie_big_nohaplotig	CDS	6371582	6372528	.	+	2	Parent=FBgn0001086.1.mrna1;Target=FBgn0001086.1 623 1569 +
ChrX	gffcl	locus	6372890	6373260	.	+	.	ID=RLOC_00000330;geneIDs=comp89623_c0_seq1.path1;transcripts=comp89623_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6372890	6373260	.	+	.	ID=comp89623_c0_seq1.mrna1;geneID=comp89623_c0_seq1.path1;Name=comp89623_c0_seq1;Dir=indeterminatecoverage=92.1;identity=97.8;matches=363;mismatches=8;indels=0;unknowns=0;Target=comp89623_c0_seq1 403 33 .;CDS_Target=comp89623_c0_seq1 403 326 .;locus=RLOC_00000330
ChrX	stalkie_big_nohaplotig	exon	6372890	6373260	97	+	.	Parent=comp89623_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6373183	6373260	.	+	0	Parent=comp89623_c0_seq1.mrna1
ChrX	gffcl	locus	6375430	6375894	.	+	.	ID=RLOC_00000331;geneIDs=comp56478_c0_seq1.path1;transcripts=comp56478_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6375430	6375894	.	+	.	ID=comp56478_c0_seq1.mrna1;geneID=comp56478_c0_seq1.path1;Name=comp56478_c0_seq1;Dir=indeterminatecoverage=95.5;identity=99.4;matches=463;mismatches=1;indels=2;unknowns=0;Target=comp56478_c0_seq1 465 1 .;CDS_Target=comp56478_c0_seq1 234 115 .;locus=RLOC_00000331
ChrX	stalkie_big_nohaplotig	exon	6375430	6375894	99	+	.	Parent=comp56478_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6375544	6375662	.	+	0	Parent=comp56478_c0_seq1.mrna1
ChrX	gffcl	locus	6376269	6376593	.	+	.	ID=RLOC_00000332;geneIDs=comp141643_c0_seq1.path1;transcripts=comp141643_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6376269	6376593	.	+	.	ID=comp141643_c0_seq1.mrna1;geneID=comp141643_c0_seq1.path1;Name=comp141643_c0_seq1;Dir=indeterminatecoverage=97.6;identity=100.0;matches=325;mismatches=0;indels=0;unknowns=0;Target=comp141643_c0_seq1 325 1 .;CDS_Target=comp141643_c0_seq1 86 3 .;locus=RLOC_00000332
ChrX	stalkie_big_nohaplotig	exon	6376269	6376593	100	+	.	Parent=comp141643_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6376271	6376354	.	+	0	Parent=comp141643_c0_seq1.mrna1
ChrX	gffcl	locus	6376798	6377084	.	-	.	ID=RLOC_00000333;geneIDs=comp47250_c0_seq1.path1;transcripts=comp47250_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6376798	6377084	.	-	.	ID=comp47250_c0_seq1.mrna1;geneID=comp47250_c0_seq1.path1;Name=comp47250_c0_seq1;Dir=indeterminatecoverage=96.3;identity=98.3;matches=282;mismatches=2;indels=3;unknowns=0;Target=comp47250_c0_seq1 295 12 .;CDS_Target=comp47250_c0_seq1 53 12 .;locus=RLOC_00000333
ChrX	stalkie_big_nohaplotig	exon	6376798	6377084	98	-	.	Parent=comp47250_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6377040	6377084	.	-	0	Parent=comp47250_c0_seq1.mrna1
ChrX	gffcl	locus	6382288	6382755	.	-	.	ID=RLOC_00000334;geneIDs=comp130867_c1_seq1.path1;transcripts=comp130867_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6382288	6382755	.	-	.	ID=comp130867_c1_seq1.mrna1;geneID=comp130867_c1_seq1.path1;Name=comp130867_c1_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=467;mismatches=1;indels=0;unknowns=0;Target=comp130867_c1_seq1 468 1 .;CDS_Target=comp130867_c1_seq1 154 89 .;locus=RLOC_00000334
ChrX	stalkie_big_nohaplotig	exon	6382288	6382755	99	-	.	Parent=comp130867_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6382602	6382667	.	-	0	Parent=comp130867_c1_seq1.mrna1
ChrX	gffcl	locus	6383023	6383876	.	+	.	ID=RLOC_00000335;geneIDs=comp144671_c0_seq1.path1;transcripts=comp144671_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6383023	6383876	.	+	.	ID=comp144671_c0_seq1.mrna1;geneID=comp144671_c0_seq1.path1;Name=comp144671_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.8;matches=844;mismatches=2;indels=8;unknowns=0;Target=comp144671_c0_seq1 846 1 .;CDS_Target=comp144671_c0_seq1 139 2 .;locus=RLOC_00000335
ChrX	stalkie_big_nohaplotig	exon	6383023	6383876	98	+	.	Parent=comp144671_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6383024	6383161	.	+	0	Parent=comp144671_c0_seq1.mrna1
ChrX	gffcl	locus	6384733	6392898	.	-	.	ID=RLOC_00000336;geneIDs=FBgn0020309.2.path1;transcripts=FBgn0020309.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6384733	6392898	.	-	.	ID=FBgn0020309.2.mrna1;geneID=FBgn0020309.2.path1;Name=FBgn0020309.2;Dir=sensecoverage=100.0;identity=100.0;matches=2823;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000336
ChrX	stalkie_big_nohaplotig	exon	6384733	6384887	100	-	.	Parent=FBgn0020309.2.mrna1;Target=FBgn0020309.2 2669 2823 +
ChrX	stalkie_big_nohaplotig	exon	6384966	6385175	100	-	.	Parent=FBgn0020309.2.mrna1;Target=FBgn0020309.2 2459 2668 +
ChrX	stalkie_big_nohaplotig	exon	6386133	6386870	100	-	.	Parent=FBgn0020309.2.mrna1;Target=FBgn0020309.2 1721 2458 +
ChrX	stalkie_big_nohaplotig	exon	6386936	6387103	100	-	.	Parent=FBgn0020309.2.mrna1;Target=FBgn0020309.2 1553 1720 +
ChrX	stalkie_big_nohaplotig	exon	6387217	6388368	100	-	.	Parent=FBgn0020309.2.mrna1;Target=FBgn0020309.2 401 1552 +
ChrX	stalkie_big_nohaplotig	exon	6388441	6388774	100	-	.	Parent=FBgn0020309.2.mrna1;Target=FBgn0020309.2 67 400 +
ChrX	stalkie_big_nohaplotig	exon	6392833	6392898	100	-	.	Parent=FBgn0020309.2.mrna1;Target=FBgn0020309.2 1 66 +
ChrX	stalkie_big_nohaplotig	CDS	6384733	6384887	.	-	2	Parent=FBgn0020309.2.mrna1;Target=FBgn0020309.2 2669 2823 +
ChrX	stalkie_big_nohaplotig	CDS	6384966	6385175	.	-	2	Parent=FBgn0020309.2.mrna1;Target=FBgn0020309.2 2459 2668 +
ChrX	stalkie_big_nohaplotig	CDS	6386133	6386870	.	-	2	Parent=FBgn0020309.2.mrna1;Target=FBgn0020309.2 1721 2458 +
ChrX	stalkie_big_nohaplotig	CDS	6386936	6387103	.	-	2	Parent=FBgn0020309.2.mrna1;Target=FBgn0020309.2 1553 1720 +
ChrX	stalkie_big_nohaplotig	CDS	6387217	6388368	.	-	2	Parent=FBgn0020309.2.mrna1;Target=FBgn0020309.2 401 1552 +
ChrX	stalkie_big_nohaplotig	CDS	6388441	6388774	.	-	0	Parent=FBgn0020309.2.mrna1;Target=FBgn0020309.2 67 400 +
ChrX	stalkie_big_nohaplotig	CDS	6392833	6392898	.	-	0	Parent=FBgn0020309.2.mrna1;Target=FBgn0020309.2 1 66 +
ChrX	gffcl	locus	6392936	6393193	.	-	.	ID=RLOC_00000337;geneIDs=comp117348_c1_seq1.path1;transcripts=comp117348_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6392936	6393193	.	-	.	ID=comp117348_c1_seq1.mrna1;geneID=comp117348_c1_seq1.path1;Name=comp117348_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=258;mismatches=0;indels=0;unknowns=0;Target=comp117348_c1_seq1 258 1 .;CDS_Target=comp117348_c1_seq1 256 2 .;locus=RLOC_00000337
ChrX	stalkie_big_nohaplotig	exon	6392936	6393193	100	-	.	Parent=comp117348_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6392938	6393192	.	-	0	Parent=comp117348_c1_seq1.mrna1
ChrX	gffcl	locus	6393397	6393451	.	-	.	ID=RLOC_00000338;geneIDs=FBgn0000061.1.path2;transcripts=FBgn0000061.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	6393397	6393451	.	-	.	ID=FBgn0000061.1.mrna2;geneID=FBgn0000061.1.path2;Name=FBgn0000061.1;Dir=indeterminatecoverage=6.0;identity=100.0;matches=55;mismatches=0;indels=0;unknowns=0;Target=FBgn0000061.1 924 870 .;locus=RLOC_00000338
ChrX	stalkie_big_nohaplotig	exon	6393397	6393451	100	-	.	Parent=FBgn0000061.1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	6393397	6393451	.	-	2	Parent=FBgn0000061.1.mrna2
ChrX	gffcl	locus	6413446	6423740	.	-	.	ID=RLOC_00000339;geneIDs=comp150642_c1_seq1.path1;transcripts=comp150642_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6413446	6423740	.	-	.	ID=comp150642_c1_seq1.mrna1;geneID=comp150642_c1_seq1.path1;Name=comp150642_c1_seq1;Dir=antisensecoverage=100.0;identity=98.8;matches=1221;mismatches=3;indels=12;unknowns=0;Target=comp150642_c1_seq1 341 520 .;locus=RLOC_00000339
ChrX	stalkie_big_nohaplotig	exon	6413446	6413792	96	-	.	Parent=comp150642_c1_seq1.mrna1;Target=comp150642_c1_seq1 1 335 -
ChrX	stalkie_big_nohaplotig	exon	6422852	6423740	99	-	.	Parent=comp150642_c1_seq1.mrna1;Target=comp150642_c1_seq1 336 1224 -
ChrX	stalkie_big_nohaplotig	CDS	6422857	6423036	.	-	0	Parent=comp150642_c1_seq1.mrna1
ChrX	gffcl	locus	6425522	6427430	.	+	.	ID=RLOC_00000340;geneIDs=FBgn0024689.1.path1;transcripts=FBgn0024689.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6425522	6427430	.	+	.	ID=FBgn0024689.1.mrna1;geneID=FBgn0024689.1.path1;Name=FBgn0024689.1;Dir=sensecoverage=100.0;identity=99.9;matches=1787;mismatches=0;indels=1;unknowns=0;Target=FBgn0024689.1 3 56 +;locus=RLOC_00000340
ChrX	stalkie_big_nohaplotig	exon	6425522	6425646	99	+	.	Parent=FBgn0024689.1.mrna1;Target=FBgn0024689.1 1 126 +
ChrX	stalkie_big_nohaplotig	exon	6425707	6426792	100	+	.	Parent=FBgn0024689.1.mrna1;Target=FBgn0024689.1 127 1212 +
ChrX	stalkie_big_nohaplotig	exon	6426855	6427430	100	+	.	Parent=FBgn0024689.1.mrna1;Target=FBgn0024689.1 1213 1788 +
ChrX	stalkie_big_nohaplotig	CDS	6425524	6425576	.	+	0	Parent=FBgn0024689.1.mrna1
ChrX	gffcl	locus	6429615	6438194	.	-	.	ID=RLOC_00000341;geneIDs=FBgn0086657.1.path1;transcripts=FBgn0086657.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6429615	6438194	.	-	.	ID=FBgn0086657.1.mrna1;geneID=FBgn0086657.1.path1;Name=FBgn0086657.1;Dir=sensecoverage=100.0;identity=99.9;matches=2146;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000341
ChrX	stalkie_big_nohaplotig	exon	6429615	6429707	98	-	.	Parent=FBgn0086657.1.mrna1;Target=FBgn0086657.1 2056 2148 +
ChrX	stalkie_big_nohaplotig	exon	6429780	6430061	100	-	.	Parent=FBgn0086657.1.mrna1;Target=FBgn0086657.1 1774 2055 +
ChrX	stalkie_big_nohaplotig	exon	6430182	6430359	100	-	.	Parent=FBgn0086657.1.mrna1;Target=FBgn0086657.1 1596 1773 +
ChrX	stalkie_big_nohaplotig	exon	6432064	6432188	100	-	.	Parent=FBgn0086657.1.mrna1;Target=FBgn0086657.1 1471 1595 +
ChrX	stalkie_big_nohaplotig	exon	6432719	6432794	100	-	.	Parent=FBgn0086657.1.mrna1;Target=FBgn0086657.1 1395 1470 +
ChrX	stalkie_big_nohaplotig	exon	6432876	6433003	100	-	.	Parent=FBgn0086657.1.mrna1;Target=FBgn0086657.1 1267 1394 +
ChrX	stalkie_big_nohaplotig	exon	6436811	6436962	100	-	.	Parent=FBgn0086657.1.mrna1;Target=FBgn0086657.1 1115 1266 +
ChrX	stalkie_big_nohaplotig	exon	6437022	6438048	99	-	.	Parent=FBgn0086657.1.mrna1;Target=FBgn0086657.1 88 1114 +
ChrX	stalkie_big_nohaplotig	exon	6438108	6438194	100	-	.	Parent=FBgn0086657.1.mrna1;Target=FBgn0086657.1 1 87 +
ChrX	stalkie_big_nohaplotig	CDS	6429615	6429707	.	-	0	Parent=FBgn0086657.1.mrna1;Target=FBgn0086657.1 2056 2148 +
ChrX	stalkie_big_nohaplotig	CDS	6429780	6430061	.	-	0	Parent=FBgn0086657.1.mrna1;Target=FBgn0086657.1 1774 2055 +
ChrX	stalkie_big_nohaplotig	CDS	6430182	6430359	.	-	1	Parent=FBgn0086657.1.mrna1;Target=FBgn0086657.1 1596 1773 +
ChrX	stalkie_big_nohaplotig	CDS	6432064	6432188	.	-	0	Parent=FBgn0086657.1.mrna1;Target=FBgn0086657.1 1471 1595 +
ChrX	stalkie_big_nohaplotig	CDS	6432719	6432794	.	-	1	Parent=FBgn0086657.1.mrna1;Target=FBgn0086657.1 1395 1470 +
ChrX	stalkie_big_nohaplotig	CDS	6432876	6433003	.	-	0	Parent=FBgn0086657.1.mrna1;Target=FBgn0086657.1 1267 1394 +
ChrX	stalkie_big_nohaplotig	CDS	6436811	6436962	.	-	2	Parent=FBgn0086657.1.mrna1;Target=FBgn0086657.1 1115 1266 +
ChrX	stalkie_big_nohaplotig	CDS	6437022	6438048	.	-	0	Parent=FBgn0086657.1.mrna1;Target=FBgn0086657.1 88 1114 +
ChrX	stalkie_big_nohaplotig	CDS	6438108	6438194	.	-	0	Parent=FBgn0086657.1.mrna1;Target=FBgn0086657.1 1 87 +
ChrX	gffcl	locus	6441223	6443255	.	-	.	ID=RLOC_00000343;geneIDs=FBgn0032643.1.path1;transcripts=FBgn0032643.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6441223	6443255	.	-	.	ID=FBgn0032643.1.mrna1;geneID=FBgn0032643.1.path1;Name=FBgn0032643.1;Dir=sensecoverage=100.0;identity=100.0;matches=1662;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000343
ChrX	stalkie_big_nohaplotig	exon	6441223	6441836	100	-	.	Parent=FBgn0032643.1.mrna1;Target=FBgn0032643.1 1049 1662 +
ChrX	stalkie_big_nohaplotig	exon	6442208	6443255	100	-	.	Parent=FBgn0032643.1.mrna1;Target=FBgn0032643.1 1 1048 +
ChrX	stalkie_big_nohaplotig	CDS	6441223	6441836	.	-	2	Parent=FBgn0032643.1.mrna1;Target=FBgn0032643.1 1049 1662 +
ChrX	stalkie_big_nohaplotig	CDS	6442208	6443255	.	-	0	Parent=FBgn0032643.1.mrna1;Target=FBgn0032643.1 1 1048 +
ChrX	gffcl	locus	6446326	6446978	.	-	.	ID=RLOC_00000344;geneIDs=AGAP008612.1.path1;transcripts=AGAP008612.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6446326	6446978	.	-	.	ID=AGAP008612.1.mrna1;geneID=AGAP008612.1.path1;Name=AGAP008612.1;Dir=sensecoverage=100.0;identity=100.0;matches=588;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000344
ChrX	stalkie_big_nohaplotig	exon	6446326	6446439	100	-	.	Parent=AGAP008612.1.mrna1;Target=AGAP008612.1 475 588 +
ChrX	stalkie_big_nohaplotig	exon	6446505	6446978	100	-	.	Parent=AGAP008612.1.mrna1;Target=AGAP008612.1 1 474 +
ChrX	stalkie_big_nohaplotig	CDS	6446326	6446439	.	-	0	Parent=AGAP008612.1.mrna1;Target=AGAP008612.1 475 588 +
ChrX	stalkie_big_nohaplotig	CDS	6446505	6446978	.	-	0	Parent=AGAP008612.1.mrna1;Target=AGAP008612.1 1 474 +
ChrX	gffcl	locus	6452611	6476167	.	+	.	ID=RLOC_00000345;geneIDs=FBgn0053526.1.path1;transcripts=FBgn0053526.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6452611	6476167	.	+	.	ID=FBgn0053526.1.mrna1;geneID=FBgn0053526.1.path1;Name=FBgn0053526.1;Dir=sensecoverage=100.0;identity=99.9;matches=4020;mismatches=3;indels=0;unknowns=2;locus=RLOC_00000345
ChrX	stalkie_big_nohaplotig	exon	6452611	6452625	100	+	.	Parent=FBgn0053526.1.mrna1;Target=FBgn0053526.1 1 15 +
ChrX	stalkie_big_nohaplotig	exon	6452737	6452834	100	+	.	Parent=FBgn0053526.1.mrna1;Target=FBgn0053526.1 16 113 +
ChrX	stalkie_big_nohaplotig	exon	6454841	6455115	99	+	.	Parent=FBgn0053526.1.mrna1;Target=FBgn0053526.1 114 388 +
ChrX	stalkie_big_nohaplotig	exon	6461493	6461636	100	+	.	Parent=FBgn0053526.1.mrna1;Target=FBgn0053526.1 389 532 +
ChrX	stalkie_big_nohaplotig	exon	6461703	6463526	99	+	.	Parent=FBgn0053526.1.mrna1;Target=FBgn0053526.1 533 2356 +
ChrX	stalkie_big_nohaplotig	exon	6474499	6476167	99	+	.	Parent=FBgn0053526.1.mrna1;Target=FBgn0053526.1 2357 4025 +
ChrX	stalkie_big_nohaplotig	CDS	6452611	6452625	.	+	0	Parent=FBgn0053526.1.mrna1;Target=FBgn0053526.1 1 15 +
ChrX	stalkie_big_nohaplotig	CDS	6452737	6452834	.	+	0	Parent=FBgn0053526.1.mrna1;Target=FBgn0053526.1 16 113 +
ChrX	stalkie_big_nohaplotig	CDS	6454841	6455115	.	+	1	Parent=FBgn0053526.1.mrna1;Target=FBgn0053526.1 114 388 +
ChrX	stalkie_big_nohaplotig	CDS	6461493	6461636	.	+	2	Parent=FBgn0053526.1.mrna1;Target=FBgn0053526.1 389 532 +
ChrX	stalkie_big_nohaplotig	CDS	6461703	6463526	.	+	2	Parent=FBgn0053526.1.mrna1;Target=FBgn0053526.1 533 2356 +
ChrX	stalkie_big_nohaplotig	CDS	6474499	6476165	.	+	2	Parent=FBgn0053526.1.mrna1;Target=FBgn0053526.1 2357 4023 +
ChrX	gffcl	locus	6479545	6483095	.	+	.	ID=RLOC_00000346;geneIDs=FBgn0002936.1.path1;transcripts=FBgn0002936.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6479545	6483095	.	+	.	ID=FBgn0002936.1.mrna1;geneID=FBgn0002936.1.path1;Name=FBgn0002936.1;Dir=sensecoverage=100.0;identity=99.7;matches=760;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000346
ChrX	stalkie_big_nohaplotig	exon	6479545	6480105	99	+	.	Parent=FBgn0002936.1.mrna1;Target=FBgn0002936.1 1 561 +
ChrX	stalkie_big_nohaplotig	exon	6482821	6482921	100	+	.	Parent=FBgn0002936.1.mrna1;Target=FBgn0002936.1 562 662 +
ChrX	stalkie_big_nohaplotig	exon	6482996	6483095	100	+	.	Parent=FBgn0002936.1.mrna1;Target=FBgn0002936.1 663 762 +
ChrX	stalkie_big_nohaplotig	CDS	6479545	6480105	.	+	0	Parent=FBgn0002936.1.mrna1;Target=FBgn0002936.1 1 561 +
ChrX	stalkie_big_nohaplotig	CDS	6482821	6482921	.	+	0	Parent=FBgn0002936.1.mrna1;Target=FBgn0002936.1 562 662 +
ChrX	stalkie_big_nohaplotig	CDS	6482996	6483095	.	+	1	Parent=FBgn0002936.1.mrna1;Target=FBgn0002936.1 663 762 +
ChrX	gffcl	locus	6483234	6497990	.	-	.	ID=RLOC_00000347;geneIDs=FBgn0031292.1.path1;transcripts=FBgn0031292.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6483234	6497990	.	-	.	ID=FBgn0031292.1.mrna1;geneID=FBgn0031292.1.path1;Name=FBgn0031292.1;Dir=sensecoverage=99.9;identity=100.0;matches=6287;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000347
ChrX	stalkie_big_nohaplotig	exon	6483234	6483287	100	-	.	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 6241 6294 +
ChrX	stalkie_big_nohaplotig	exon	6483352	6483757	100	-	.	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 5835 6240 +
ChrX	stalkie_big_nohaplotig	exon	6484394	6485325	100	-	.	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 4903 5834 +
ChrX	stalkie_big_nohaplotig	exon	6485402	6485529	100	-	.	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 4775 4902 +
ChrX	stalkie_big_nohaplotig	exon	6486417	6486882	100	-	.	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 4309 4774 +
ChrX	stalkie_big_nohaplotig	exon	6487232	6487411	100	-	.	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 4129 4308 +
ChrX	stalkie_big_nohaplotig	exon	6487495	6487733	100	-	.	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 3890 4128 +
ChrX	stalkie_big_nohaplotig	exon	6488630	6489125	100	-	.	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 3394 3889 +
ChrX	stalkie_big_nohaplotig	exon	6489196	6489345	100	-	.	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 3244 3393 +
ChrX	stalkie_big_nohaplotig	exon	6489486	6489666	100	-	.	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 3063 3243 +
ChrX	stalkie_big_nohaplotig	exon	6489730	6489860	100	-	.	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 2932 3062 +
ChrX	stalkie_big_nohaplotig	exon	6489916	6490460	100	-	.	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 2387 2931 +
ChrX	stalkie_big_nohaplotig	exon	6492141	6492994	99	-	.	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 1533 2386 +
ChrX	stalkie_big_nohaplotig	exon	6493055	6493259	100	-	.	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 1328 1532 +
ChrX	stalkie_big_nohaplotig	exon	6493310	6493595	100	-	.	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 1042 1327 +
ChrX	stalkie_big_nohaplotig	exon	6494702	6495060	100	-	.	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 683 1041 +
ChrX	stalkie_big_nohaplotig	exon	6497024	6497154	99	-	.	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 552 682 +
ChrX	stalkie_big_nohaplotig	exon	6497228	6497360	100	-	.	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 419 551 +
ChrX	stalkie_big_nohaplotig	exon	6497441	6497651	100	-	.	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 208 418 +
ChrX	stalkie_big_nohaplotig	exon	6497720	6497844	100	-	.	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 83 207 +
ChrX	stalkie_big_nohaplotig	exon	6497914	6497990	100	-	.	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 6 82 +
ChrX	stalkie_big_nohaplotig	CDS	6483234	6483287	.	-	0	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 6241 6294 +
ChrX	stalkie_big_nohaplotig	CDS	6483352	6483757	.	-	1	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 5835 6240 +
ChrX	stalkie_big_nohaplotig	CDS	6484394	6485325	.	-	0	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 4903 5834 +
ChrX	stalkie_big_nohaplotig	CDS	6485402	6485529	.	-	2	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 4775 4902 +
ChrX	stalkie_big_nohaplotig	CDS	6486417	6486882	.	-	0	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 4309 4774 +
ChrX	stalkie_big_nohaplotig	CDS	6487232	6487411	.	-	0	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 4129 4308 +
ChrX	stalkie_big_nohaplotig	CDS	6487495	6487733	.	-	2	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 3890 4128 +
ChrX	stalkie_big_nohaplotig	CDS	6488630	6489125	.	-	0	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 3394 3889 +
ChrX	stalkie_big_nohaplotig	CDS	6489196	6489345	.	-	0	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 3244 3393 +
ChrX	stalkie_big_nohaplotig	CDS	6489486	6489666	.	-	1	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 3063 3243 +
ChrX	stalkie_big_nohaplotig	CDS	6489730	6489860	.	-	0	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 2932 3062 +
ChrX	stalkie_big_nohaplotig	CDS	6489916	6490460	.	-	2	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 2387 2931 +
ChrX	stalkie_big_nohaplotig	CDS	6492141	6492994	.	-	1	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 1533 2386 +
ChrX	stalkie_big_nohaplotig	CDS	6493055	6493259	.	-	2	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 1328 1532 +
ChrX	stalkie_big_nohaplotig	CDS	6493310	6493595	.	-	0	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 1042 1327 +
ChrX	stalkie_big_nohaplotig	CDS	6494702	6495060	.	-	2	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 683 1041 +
ChrX	stalkie_big_nohaplotig	CDS	6497024	6497154	.	-	1	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 552 682 +
ChrX	stalkie_big_nohaplotig	CDS	6497228	6497360	.	-	2	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 419 551 +
ChrX	stalkie_big_nohaplotig	CDS	6497441	6497651	.	-	0	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 208 418 +
ChrX	stalkie_big_nohaplotig	CDS	6497720	6497844	.	-	2	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 83 207 +
ChrX	stalkie_big_nohaplotig	CDS	6497914	6497989	.	-	0	Parent=FBgn0031292.1.mrna1;Target=FBgn0031292.1 7 82 +
ChrX	gffcl	locus	6499165	6499769	.	+	.	ID=RLOC_00000348;geneIDs=FBgn0031231.1.path1;transcripts=FBgn0031231.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6499165	6499769	.	+	.	ID=FBgn0031231.1.mrna1;geneID=FBgn0031231.1.path1;Name=FBgn0031231.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=605;mismatches=0;indels=1;unknowns=0;Target=FBgn0031231.1 606 1 .;CDS_Target=FBgn0031231.1 50 3 .;locus=RLOC_00000348
ChrX	stalkie_big_nohaplotig	exon	6499165	6499769	99	+	.	Parent=FBgn0031231.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6499167	6499213	.	+	0	Parent=FBgn0031231.1.mrna1
ChrX	gffcl	locus	6501891	6514687	.	-	.	ID=RLOC_00000349;geneIDs=FBgn0031232.1.path1,comp91514_c0_seq1.path1;transcripts=FBgn0031232.1.mrna1,comp91514_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6501891	6502911	.	-	.	ID=FBgn0031232.1.mrna1;geneID=FBgn0031232.1.path1;Name=FBgn0031232.1;Dir=sensecoverage=98.9;identity=99.8;matches=947;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000349
ChrX	stalkie_big_nohaplotig	exon	6501891	6502044	99	-	.	Parent=FBgn0031232.1.mrna1;Target=FBgn0031232.1 804 957 +
ChrX	stalkie_big_nohaplotig	exon	6502117	6502911	99	-	.	Parent=FBgn0031232.1.mrna1;Target=FBgn0031232.1 9 803 +
ChrX	stalkie_big_nohaplotig	CDS	6501891	6502044	.	-	1	Parent=FBgn0031232.1.mrna1;Target=FBgn0031232.1 804 957 +
ChrX	stalkie_big_nohaplotig	CDS	6502117	6502910	.	-	0	Parent=FBgn0031232.1.mrna1;Target=FBgn0031232.1 10 803 +
ChrX	stalkie_big_nohaplotig	mRNA	6502885	6514687	.	-	.	ID=comp91514_c0_seq1.mrna1;geneID=comp91514_c0_seq1.path1;Name=comp91514_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=217;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000349
ChrX	stalkie_big_nohaplotig	exon	6502885	6502908	100	-	.	Parent=comp91514_c0_seq1.mrna1;Target=comp91514_c0_seq1 1 24 -
ChrX	stalkie_big_nohaplotig	exon	6512258	6512429	99	-	.	Parent=comp91514_c0_seq1.mrna1;Target=comp91514_c0_seq1 25 196 -
ChrX	stalkie_big_nohaplotig	exon	6514666	6514687	100	-	.	Parent=comp91514_c0_seq1.mrna1;Target=comp91514_c0_seq1 197 218 -
ChrX	stalkie_big_nohaplotig	CDS	6502887	6502908	.	-	1	Parent=comp91514_c0_seq1.mrna1;Target=comp91514_c0_seq1 3 24 .
ChrX	stalkie_big_nohaplotig	CDS	6512258	6512274	.	-	0	Parent=comp91514_c0_seq1.mrna1;Target=comp91514_c0_seq1 25 41 .
ChrX	gffcl	locus	6528519	6530674	.	+	.	ID=RLOC_00000350;geneIDs=comp156309_c0_seq1.path1;transcripts=comp156309_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6528519	6530674	.	+	.	ID=comp156309_c0_seq1.mrna1;geneID=comp156309_c0_seq1.path1;Name=comp156309_c0_seq1;Dir=sensecoverage=99.4;identity=98.9;matches=828;mismatches=4;indels=5;unknowns=0;Target=comp156309_c0_seq1 6 71 +;locus=RLOC_00000350
ChrX	stalkie_big_nohaplotig	exon	6528519	6528973	98	+	.	Parent=comp156309_c0_seq1.mrna1;Target=comp156309_c0_seq1 6 460 +
ChrX	stalkie_big_nohaplotig	exon	6530232	6530331	100	+	.	Parent=comp156309_c0_seq1.mrna1;Target=comp156309_c0_seq1 461 560 +
ChrX	stalkie_big_nohaplotig	exon	6530396	6530674	99	+	.	Parent=comp156309_c0_seq1.mrna1;Target=comp156309_c0_seq1 561 840 +
ChrX	stalkie_big_nohaplotig	CDS	6528519	6528586	.	+	0	Parent=comp156309_c0_seq1.mrna1
ChrX	gffcl	locus	6570270	6579105	.	+	.	ID=RLOC_00000351;geneIDs=comp150141_c0_seq1.path1;transcripts=comp150141_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6570270	6579105	.	+	.	ID=comp150141_c0_seq1.mrna1;geneID=comp150141_c0_seq1.path1;Name=comp150141_c0_seq1;Dir=antisensecoverage=98.7;identity=99.8;matches=659;mismatches=1;indels=0;unknowns=0;Target=comp150141_c0_seq1 150 533 .;locus=RLOC_00000351
ChrX	stalkie_big_nohaplotig	exon	6570270	6570819	100	+	.	Parent=comp150141_c0_seq1.mrna1;Target=comp150141_c0_seq1 111 660 -
ChrX	stalkie_big_nohaplotig	exon	6578944	6579002	100	+	.	Parent=comp150141_c0_seq1.mrna1;Target=comp150141_c0_seq1 52 110 -
ChrX	stalkie_big_nohaplotig	exon	6579055	6579105	98	+	.	Parent=comp150141_c0_seq1.mrna1;Target=comp150141_c0_seq1 1 51 -
ChrX	stalkie_big_nohaplotig	CDS	6570397	6570780	.	+	0	Parent=comp150141_c0_seq1.mrna1
ChrX	gffcl	locus	6585399	6645304	.	+	.	ID=RLOC_00000352;geneIDs=comp146348_c0_seq1.path1;transcripts=comp146348_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6585399	6645304	.	+	.	ID=comp146348_c0_seq1.mrna1;geneID=comp146348_c0_seq1.path1;Name=comp146348_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=904;mismatches=7;indels=2;unknowns=0;locus=RLOC_00000352
ChrX	stalkie_big_nohaplotig	exon	6585399	6585833	99	+	.	Parent=comp146348_c0_seq1.mrna1;Target=comp146348_c0_seq1 435 1 .
ChrX	stalkie_big_nohaplotig	exon	6644827	6645304	98	+	.	Parent=comp146348_c0_seq1.mrna1;Target=comp146348_c0_seq1 911 436 .
ChrX	stalkie_big_nohaplotig	CDS	6585765	6585833	.	+	0	Parent=comp146348_c0_seq1.mrna1;Target=comp146348_c0_seq1 435 367 .
ChrX	stalkie_big_nohaplotig	CDS	6644827	6644883	.	+	0	Parent=comp146348_c0_seq1.mrna1;Target=comp146348_c0_seq1 492 436 .
ChrX	gffcl	locus	6607304	6608438	.	+	.	ID=RLOC_00000353;geneIDs=comp153144_c0_seq1.path1;transcripts=comp153144_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6607304	6608438	.	+	.	ID=comp153144_c0_seq1.mrna1;geneID=comp153144_c0_seq1.path1;Name=comp153144_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.7;matches=1132;mismatches=3;indels=0;unknowns=0;Target=comp153144_c0_seq1 1135 1 .;CDS_Target=comp153144_c0_seq1 417 220 .;locus=RLOC_00000353
ChrX	stalkie_big_nohaplotig	exon	6607304	6608438	99	+	.	Parent=comp153144_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6607523	6607720	.	+	0	Parent=comp153144_c0_seq1.mrna1
ChrX	gffcl	locus	6622078	6622832	.	+	.	ID=RLOC_00000354;geneIDs=comp134661_c0_seq1.path1;transcripts=comp134661_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6622078	6622832	.	+	.	ID=comp134661_c0_seq1.mrna1;geneID=comp134661_c0_seq1.path1;Name=comp134661_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=645;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000354
ChrX	stalkie_big_nohaplotig	exon	6622078	6622133	100	+	.	Parent=comp134661_c0_seq1.mrna1;Target=comp134661_c0_seq1 590 645 -
ChrX	stalkie_big_nohaplotig	exon	6622192	6622304	100	+	.	Parent=comp134661_c0_seq1.mrna1;Target=comp134661_c0_seq1 477 589 -
ChrX	stalkie_big_nohaplotig	exon	6622357	6622832	100	+	.	Parent=comp134661_c0_seq1.mrna1;Target=comp134661_c0_seq1 1 476 -
ChrX	stalkie_big_nohaplotig	CDS	6622104	6622133	.	+	0	Parent=comp134661_c0_seq1.mrna1;Target=comp134661_c0_seq1 590 619 .
ChrX	stalkie_big_nohaplotig	CDS	6622192	6622304	.	+	0	Parent=comp134661_c0_seq1.mrna1;Target=comp134661_c0_seq1 477 589 .
ChrX	stalkie_big_nohaplotig	CDS	6622357	6622702	.	+	1	Parent=comp134661_c0_seq1.mrna1;Target=comp134661_c0_seq1 131 476 .
ChrX	gffcl	locus	6629491	6630540	.	+	.	ID=RLOC_00000355;geneIDs=ORF1596.path1;transcripts=ORF1596.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6629491	6630540	.	+	.	ID=ORF1596.mrna1;geneID=ORF1596.path1;Name=ORF1596;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1046;mismatches=4;indels=0;unknowns=0;Target=ORF1596 1050 1 .;locus=RLOC_00000355
ChrX	stalkie_big_nohaplotig	exon	6629491	6630540	99	+	.	Parent=ORF1596.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6629491	6630540	.	+	0	Parent=ORF1596.mrna1
ChrX	gffcl	locus	6639944	6640641	.	-	.	ID=RLOC_00000356;geneIDs=comp149132_c0_seq1.path1;transcripts=comp149132_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6639944	6640641	.	-	.	ID=comp149132_c0_seq1.mrna1;geneID=comp149132_c0_seq1.path1;Name=comp149132_c0_seq1;Dir=indeterminatecoverage=97.8;identity=99.1;matches=692;mismatches=6;indels=0;unknowns=0;Target=comp149132_c0_seq1 712 15 .;CDS_Target=comp149132_c0_seq1 618 172 .;locus=RLOC_00000356
ChrX	stalkie_big_nohaplotig	exon	6639944	6640641	99	-	.	Parent=comp149132_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6640038	6640484	.	-	0	Parent=comp149132_c0_seq1.mrna1
ChrX	gffcl	locus	6647403	6648464	.	+	.	ID=RLOC_00000357;geneIDs=ORF1556.path1;transcripts=ORF1556.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6647403	6648464	.	+	.	ID=ORF1556.mrna1;geneID=ORF1556.path1;Name=ORF1556;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1057;mismatches=5;indels=0;unknowns=0;Target=ORF1556 1062 1 .;locus=RLOC_00000357
ChrX	stalkie_big_nohaplotig	exon	6647403	6648464	99	+	.	Parent=ORF1556.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6647403	6648464	.	+	0	Parent=ORF1556.mrna1
ChrX	gffcl	locus	6666552	6669022	.	-	.	ID=RLOC_00000358;geneIDs=comp161272_c0_seq1.path1;transcripts=comp161272_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6666552	6669022	.	-	.	ID=comp161272_c0_seq1.mrna1;geneID=comp161272_c0_seq1.path1;Name=comp161272_c0_seq1;Dir=sensecoverage=65.4;identity=99.5;matches=2090;mismatches=10;indels=0;unknowns=0;Target=comp161272_c0_seq1 91 414 +;locus=RLOC_00000358
ChrX	stalkie_big_nohaplotig	exon	6666552	6666929	99	-	.	Parent=comp161272_c0_seq1.mrna1;Target=comp161272_c0_seq1 1723 2100 +
ChrX	stalkie_big_nohaplotig	exon	6666996	6667274	100	-	.	Parent=comp161272_c0_seq1.mrna1;Target=comp161272_c0_seq1 1444 1722 +
ChrX	stalkie_big_nohaplotig	exon	6667363	6668000	98	-	.	Parent=comp161272_c0_seq1.mrna1;Target=comp161272_c0_seq1 806 1443 +
ChrX	stalkie_big_nohaplotig	exon	6668073	6668318	100	-	.	Parent=comp161272_c0_seq1.mrna1;Target=comp161272_c0_seq1 560 805 +
ChrX	stalkie_big_nohaplotig	exon	6668408	6668492	100	-	.	Parent=comp161272_c0_seq1.mrna1;Target=comp161272_c0_seq1 475 559 +
ChrX	stalkie_big_nohaplotig	exon	6668549	6669022	99	-	.	Parent=comp161272_c0_seq1.mrna1;Target=comp161272_c0_seq1 1 474 +
ChrX	stalkie_big_nohaplotig	CDS	6668609	6668932	.	-	0	Parent=comp161272_c0_seq1.mrna1
ChrX	gffcl	locus	6699672	6743336	.	+	.	ID=RLOC_00000359;geneIDs=FBgn0002931.path1;transcripts=FBgn0002931.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6699672	6743336	.	+	.	ID=FBgn0002931.mrna1;geneID=FBgn0002931.path1;Name=FBgn0002931;Dir=sensecoverage=100.0;identity=99.1;matches=633;mismatches=0;indels=6;unknowns=0;locus=RLOC_00000359
ChrX	stalkie_big_nohaplotig	exon	6699672	6699801	100	+	.	Parent=FBgn0002931.mrna1;Target=FBgn0002931 1 130 +
ChrX	stalkie_big_nohaplotig	exon	6742828	6743336	98	+	.	Parent=FBgn0002931.mrna1;Target=FBgn0002931 131 633 +
ChrX	stalkie_big_nohaplotig	CDS	6699672	6699801	.	+	0	Parent=FBgn0002931.mrna1;Target=FBgn0002931 1 130 +
ChrX	stalkie_big_nohaplotig	CDS	6742828	6743336	.	+	2	Parent=FBgn0002931.mrna1;Target=FBgn0002931 131 633 +
ChrX	gffcl	locus	6807274	6808300	.	+	.	ID=RLOC_00000360;geneIDs=comp151601_c0_seq1.path1;transcripts=comp151601_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6807274	6808300	.	+	.	ID=comp151601_c0_seq1.mrna1;geneID=comp151601_c0_seq1.path1;Name=comp151601_c0_seq1;Dir=sensecoverage=100.0;identity=96.3;matches=944;mismatches=22;indels=14;unknowns=0;Target=comp151601_c0_seq1 1 396 +;locus=RLOC_00000360
ChrX	stalkie_big_nohaplotig	exon	6807274	6807995	95	+	.	Parent=comp151601_c0_seq1.mrna1;Target=comp151601_c0_seq1 1 736 +
ChrX	stalkie_big_nohaplotig	exon	6808057	6808300	100	+	.	Parent=comp151601_c0_seq1.mrna1;Target=comp151601_c0_seq1 737 980 +
ChrX	stalkie_big_nohaplotig	CDS	6807274	6807669	.	+	0	Parent=comp151601_c0_seq1.mrna1
ChrX	gffcl	locus	6818829	6830802	.	-	.	ID=RLOC_00000361;geneIDs=FBgn0031213.1.path1;transcripts=FBgn0031213.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6818829	6830802	.	-	.	ID=FBgn0031213.1.mrna1;geneID=FBgn0031213.1.path1;Name=FBgn0031213.1;Dir=sensecoverage=100.0;identity=99.8;matches=1242;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000361
ChrX	stalkie_big_nohaplotig	exon	6818829	6819843	99	-	.	Parent=FBgn0031213.1.mrna1;Target=FBgn0031213.1 231 1245 +
ChrX	stalkie_big_nohaplotig	exon	6819904	6820019	100	-	.	Parent=FBgn0031213.1.mrna1;Target=FBgn0031213.1 115 230 +
ChrX	stalkie_big_nohaplotig	exon	6830689	6830802	100	-	.	Parent=FBgn0031213.1.mrna1;Target=FBgn0031213.1 1 114 +
ChrX	stalkie_big_nohaplotig	CDS	6818829	6819843	.	-	1	Parent=FBgn0031213.1.mrna1;Target=FBgn0031213.1 231 1245 +
ChrX	stalkie_big_nohaplotig	CDS	6819904	6820019	.	-	0	Parent=FBgn0031213.1.mrna1;Target=FBgn0031213.1 115 230 +
ChrX	stalkie_big_nohaplotig	CDS	6830689	6830802	.	-	0	Parent=FBgn0031213.1.mrna1;Target=FBgn0031213.1 1 114 +
ChrX	gffcl	locus	6831832	6832285	.	+	.	ID=RLOC_00000362;geneIDs=comp115143_c0_seq1.path1;transcripts=comp115143_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6831832	6832285	.	+	.	ID=comp115143_c0_seq1.mrna1;geneID=comp115143_c0_seq1.path1;Name=comp115143_c0_seq1;Dir=indeterminatecoverage=97.6;identity=99.1;matches=451;mismatches=3;indels=1;unknowns=0;Target=comp115143_c0_seq1 461 7 .;CDS_Target=comp115143_c0_seq1 461 306 .;locus=RLOC_00000362
ChrX	stalkie_big_nohaplotig	exon	6831832	6832285	99	+	.	Parent=comp115143_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6832130	6832285	.	+	0	Parent=comp115143_c0_seq1.mrna1
ChrX	gffcl	locus	6841893	6843920	.	.	.	ID=RLOC_00000363;geneIDs=comp148001_c0_seq1.path1,comp155049_c0_seq1.path1;transcripts=comp155049_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6841893	6843387	.	+	.	ID=comp155049_c0_seq1.mrna1;geneID=comp155049_c0_seq1.path1;Name=comp155049_c0_seq1;Dir=sensecoverage=100.0;identity=98.9;matches=1333;mismatches=15;indels=0;unknowns=0;locus=RLOC_00000363
ChrX	stalkie_big_nohaplotig	exon	6841893	6842032	96	+	.	Parent=comp155049_c0_seq1.mrna1;Target=comp155049_c0_seq1 1 140 +
ChrX	stalkie_big_nohaplotig	exon	6842098	6842632	99	+	.	Parent=comp155049_c0_seq1.mrna1;Target=comp155049_c0_seq1 141 675 +
ChrX	stalkie_big_nohaplotig	exon	6842715	6843387	98	+	.	Parent=comp155049_c0_seq1.mrna1;Target=comp155049_c0_seq1 676 1348 +
ChrX	stalkie_big_nohaplotig	CDS	6841893	6842032	.	+	0	Parent=comp155049_c0_seq1.mrna1;Target=comp155049_c0_seq1 1 140 +
ChrX	stalkie_big_nohaplotig	CDS	6842098	6842209	.	+	1	Parent=comp155049_c0_seq1.mrna1;Target=comp155049_c0_seq1 141 252 +
ChrX	gffcl	locus	6853053	6853794	.	+	.	ID=RLOC_00000364;geneIDs=comp143596_c0_seq1.path1;transcripts=comp143596_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6853053	6853794	.	+	.	ID=comp143596_c0_seq1.mrna1;geneID=comp143596_c0_seq1.path1;Name=comp143596_c0_seq1;Dir=sensecoverage=97.3;identity=98.8;matches=651;mismatches=8;indels=0;unknowns=0;locus=RLOC_00000364
ChrX	stalkie_big_nohaplotig	exon	6853053	6853211	98	+	.	Parent=comp143596_c0_seq1.mrna1;Target=comp143596_c0_seq1 1 159 +
ChrX	stalkie_big_nohaplotig	exon	6853295	6853794	99	+	.	Parent=comp143596_c0_seq1.mrna1;Target=comp143596_c0_seq1 160 659 +
ChrX	stalkie_big_nohaplotig	CDS	6853150	6853211	.	+	0	Parent=comp143596_c0_seq1.mrna1;Target=comp143596_c0_seq1 98 159 +
ChrX	stalkie_big_nohaplotig	CDS	6853295	6853730	.	+	1	Parent=comp143596_c0_seq1.mrna1;Target=comp143596_c0_seq1 160 595 +
ChrX	gffcl	locus	6855903	6856093	.	-	.	ID=RLOC_00000365;geneIDs=comp101782_c0_seq1.path1;transcripts=comp101782_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6855903	6856093	.	-	.	ID=comp101782_c0_seq1.mrna1;geneID=comp101782_c0_seq1.path1;Name=comp101782_c0_seq1;Dir=indeterminatecoverage=91.4;identity=100.0;matches=191;mismatches=0;indels=0;unknowns=0;Target=comp101782_c0_seq1 207 17 .;CDS_Target=comp101782_c0_seq1 43 17 .;locus=RLOC_00000365
ChrX	stalkie_big_nohaplotig	exon	6855903	6856093	100	-	.	Parent=comp101782_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6856067	6856093	.	-	0	Parent=comp101782_c0_seq1.mrna1
ChrX	gffcl	locus	6856124	6856754	.	+	.	ID=RLOC_00000366;geneIDs=comp135054_c0_seq1.path1;transcripts=comp135054_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6856124	6856754	.	+	.	ID=comp135054_c0_seq1.mrna1;geneID=comp135054_c0_seq1.path1;Name=comp135054_c0_seq1;Dir=indeterminatecoverage=98.1;identity=100.0;matches=631;mismatches=0;indels=0;unknowns=0;Target=comp135054_c0_seq1 631 1 .;CDS_Target=comp135054_c0_seq1 112 2 .;locus=RLOC_00000366
ChrX	stalkie_big_nohaplotig	exon	6856124	6856754	100	+	.	Parent=comp135054_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6856125	6856235	.	+	0	Parent=comp135054_c0_seq1.mrna1
ChrX	gffcl	locus	6858675	6858887	.	-	.	ID=RLOC_00000367;geneIDs=comp111295_c0_seq1.path1;transcripts=comp111295_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6858675	6858887	.	-	.	ID=comp111295_c0_seq1.mrna1;geneID=comp111295_c0_seq1.path1;Name=comp111295_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=212;mismatches=1;indels=0;unknowns=0;Target=comp111295_c0_seq1 213 1 .;CDS_Target=comp111295_c0_seq1 162 1 .;locus=RLOC_00000367
ChrX	stalkie_big_nohaplotig	exon	6858675	6858887	99	-	.	Parent=comp111295_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	6858726	6858887	.	-	0	Parent=comp111295_c0_seq1.mrna1
ChrX	gffcl	locus	6865588	6868589	.	-	.	ID=RLOC_00000368;geneIDs=FBgn0067779.1.path1;transcripts=FBgn0067779.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6865588	6868589	.	-	.	ID=FBgn0067779.1.mrna1;geneID=FBgn0067779.1.path1;Name=FBgn0067779.1;Dir=sensecoverage=94.9;identity=99.7;matches=2688;mismatches=8;indels=0;unknowns=0;locus=RLOC_00000368
ChrX	stalkie_big_nohaplotig	exon	6865588	6865698	100	-	.	Parent=FBgn0067779.1.mrna1;Target=FBgn0067779.1 2727 2837 +
ChrX	stalkie_big_nohaplotig	exon	6865764	6866054	100	-	.	Parent=FBgn0067779.1.mrna1;Target=FBgn0067779.1 2436 2726 +
ChrX	stalkie_big_nohaplotig	exon	6866222	6868383	99	-	.	Parent=FBgn0067779.1.mrna1;Target=FBgn0067779.1 274 2435 +
ChrX	stalkie_big_nohaplotig	exon	6868458	6868589	100	-	.	Parent=FBgn0067779.1.mrna1;Target=FBgn0067779.1 142 273 +
ChrX	stalkie_big_nohaplotig	CDS	6865590	6865698	.	-	1	Parent=FBgn0067779.1.mrna1;Target=FBgn0067779.1 2727 2835 +
ChrX	stalkie_big_nohaplotig	CDS	6865764	6866054	.	-	1	Parent=FBgn0067779.1.mrna1;Target=FBgn0067779.1 2436 2726 +
ChrX	stalkie_big_nohaplotig	CDS	6866222	6868383	.	-	0	Parent=FBgn0067779.1.mrna1;Target=FBgn0067779.1 274 2435 +
ChrX	stalkie_big_nohaplotig	CDS	6868458	6868589	.	-	0	Parent=FBgn0067779.1.mrna1;Target=FBgn0067779.1 142 273 +
ChrX	gffcl	locus	6964427	6965240	.	-	.	ID=RLOC_00000369;geneIDs=ORF3198.path1;transcripts=ORF3198.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6964427	6965240	.	-	.	ID=ORF3198.mrna1;geneID=ORF3198.path1;Name=ORF3198;Dir=sensecoverage=100.0;identity=99.9;matches=755;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000369
ChrX	stalkie_big_nohaplotig	exon	6964427	6965121	99	-	.	Parent=ORF3198.mrna1;Target=ORF3198 62 756 +
ChrX	stalkie_big_nohaplotig	exon	6965180	6965240	100	-	.	Parent=ORF3198.mrna1;Target=ORF3198 1 61 +
ChrX	stalkie_big_nohaplotig	CDS	6964427	6965121	.	-	2	Parent=ORF3198.mrna1;Target=ORF3198 62 756 +
ChrX	stalkie_big_nohaplotig	CDS	6965180	6965240	.	-	0	Parent=ORF3198.mrna1;Target=ORF3198 1 61 +
ChrX	gffcl	locus	6967043	8217555	.	-	.	ID=RLOC_00000370;geneIDs=comp160910_c0_seq1.path1;transcripts=comp160910_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	6967043	8217555	.	-	.	ID=comp160910_c0_seq1.mrna1;geneID=comp160910_c0_seq1.path1;Name=comp160910_c0_seq1;Dir=sensecoverage=92.7;identity=97.7;matches=1911;mismatches=31;indels=14;unknowns=0;locus=RLOC_00000370
ChrX	stalkie_big_nohaplotig	exon	6967043	6967050	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 2137 2144 +
ChrX	stalkie_big_nohaplotig	exon	6968170	6968177	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 2071 2078 +
ChrX	stalkie_big_nohaplotig	exon	6973413	6973416	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 2067 2070 +
ChrX	stalkie_big_nohaplotig	exon	6973418	6973425	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 2026 2033 +
ChrX	stalkie_big_nohaplotig	exon	6976445	6976448	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 2022 2025 +
ChrX	stalkie_big_nohaplotig	exon	6981837	6981843	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 2015 2021 +
ChrX	stalkie_big_nohaplotig	exon	6983762	6983770	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 2004 2012 +
ChrX	stalkie_big_nohaplotig	exon	6987078	6987089	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 1974 1985 +
ChrX	stalkie_big_nohaplotig	exon	6997918	6997920	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 1971 1973 +
ChrX	stalkie_big_nohaplotig	exon	7000167	7000168	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 1969 1970 +
ChrX	stalkie_big_nohaplotig	exon	7000895	7000902	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 1961 1968 +
ChrX	stalkie_big_nohaplotig	exon	7003298	7003301	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 1957 1960 +
ChrX	stalkie_big_nohaplotig	exon	7005429	7005438	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 1940 1949 +
ChrX	stalkie_big_nohaplotig	exon	7011152	7011153	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 1938 1939 +
ChrX	stalkie_big_nohaplotig	exon	7012170	7012176	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 1931 1937 +
ChrX	stalkie_big_nohaplotig	exon	7012179	7012189	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 1890 1900 +
ChrX	stalkie_big_nohaplotig	exon	7027701	7027703	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 1887 1889 +
ChrX	stalkie_big_nohaplotig	exon	7027722	7027729	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 1858 1865 +
ChrX	stalkie_big_nohaplotig	exon	7035863	7035871	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 1844 1852 +
ChrX	stalkie_big_nohaplotig	exon	7037209	7037216	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 1836 1843 +
ChrX	stalkie_big_nohaplotig	exon	7039755	7039757	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 1833 1835 +
ChrX	stalkie_big_nohaplotig	exon	7045263	7045264	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 1831 1832 +
ChrX	stalkie_big_nohaplotig	exon	7051917	7051922	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 1825 1830 +
ChrX	stalkie_big_nohaplotig	exon	8215407	8215591	92	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 1626 1822 +
ChrX	stalkie_big_nohaplotig	exon	8215674	8215746	98	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 1553 1625 +
ChrX	stalkie_big_nohaplotig	exon	8215811	8216245	97	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 1118 1552 +
ChrX	stalkie_big_nohaplotig	exon	8216319	8216886	97	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 550 1117 +
ChrX	stalkie_big_nohaplotig	exon	8216958	8217090	97	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 417 549 +
ChrX	stalkie_big_nohaplotig	exon	8217154	8217555	100	-	.	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 15 416 +
ChrX	stalkie_big_nohaplotig	CDS	8217082	8217090	.	-	0	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 417 425 +
ChrX	stalkie_big_nohaplotig	CDS	8217154	8217555	.	-	0	Parent=comp160910_c0_seq1.mrna1;Target=comp160910_c0_seq1 15 416 +
ChrX	gffcl	locus	7104630	7104886	.	-	.	ID=RLOC_00000372;geneIDs=comp117726_c0_seq1.path1;transcripts=comp117726_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7104630	7104886	.	-	.	ID=comp117726_c0_seq1.mrna1;geneID=comp117726_c0_seq1.path1;Name=comp117726_c0_seq1;Dir=indeterminatecoverage=52.4;identity=100.0;matches=257;mismatches=0;indels=0;unknowns=0;Target=comp117726_c0_seq1 257 1 .;CDS_Target=comp117726_c0_seq1 141 1 .;locus=RLOC_00000372
ChrX	stalkie_big_nohaplotig	exon	7104630	7104886	100	-	.	Parent=comp117726_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7104746	7104886	.	-	0	Parent=comp117726_c0_seq1.mrna1
ChrX	gffcl	locus	7110093	7158324	.	+	.	ID=RLOC_00000373;geneIDs=comp123069_c1_seq1.path1;transcripts=comp123069_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7110093	7158324	.	+	.	ID=comp123069_c1_seq1.mrna1;geneID=comp123069_c1_seq1.path1;Name=comp123069_c1_seq1;Dir=antisensecoverage=99.8;identity=99.0;matches=570;mismatches=1;indels=5;unknowns=0;Target=comp123069_c1_seq1 40 159 .;locus=RLOC_00000373
ChrX	stalkie_big_nohaplotig	exon	7110093	7110258	99	+	.	Parent=comp123069_c1_seq1.mrna1;Target=comp123069_c1_seq1 409 574 -
ChrX	stalkie_big_nohaplotig	exon	7157918	7158324	98	+	.	Parent=comp123069_c1_seq1.mrna1;Target=comp123069_c1_seq1 1 408 -
ChrX	stalkie_big_nohaplotig	CDS	7158167	7158285	.	+	0	Parent=comp123069_c1_seq1.mrna1
ChrX	gffcl	locus	7161323	7161962	.	+	.	ID=RLOC_00000374;geneIDs=comp135385_c0_seq1.path1;transcripts=comp135385_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7161323	7161962	.	+	.	ID=comp135385_c0_seq1.mrna1;geneID=comp135385_c0_seq1.path1;Name=comp135385_c0_seq1;Dir=indeterminatecoverage=95.2;identity=99.7;matches=638;mismatches=2;indels=0;unknowns=0;Target=comp135385_c0_seq1 657 18 .;CDS_Target=comp135385_c0_seq1 557 135 .;locus=RLOC_00000374
ChrX	stalkie_big_nohaplotig	exon	7161323	7161962	99	+	.	Parent=comp135385_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7161440	7161862	.	+	0	Parent=comp135385_c0_seq1.mrna1
ChrX	gffcl	locus	7163334	7163803	.	-	.	ID=RLOC_00000375;geneIDs=comp155358_c0_seq1.path1;transcripts=comp155358_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7163334	7163803	.	-	.	ID=comp155358_c0_seq1.mrna1;geneID=comp155358_c0_seq1.path1;Name=comp155358_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=469;mismatches=1;indels=0;unknowns=0;Target=comp155358_c0_seq1 470 1 .;CDS_Target=comp155358_c0_seq1 213 196 .;locus=RLOC_00000375
ChrX	stalkie_big_nohaplotig	exon	7163334	7163803	99	-	.	Parent=comp155358_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7163591	7163608	.	-	0	Parent=comp155358_c0_seq1.mrna1
ChrX	gffcl	locus	7181694	7216522	.	.	.	ID=RLOC_00000376;geneIDs=comp136522_c1_seq1.path1,comp1003620_c0_seq1.path1;transcripts=comp1003620_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7181694	7216093	.	-	.	ID=comp1003620_c0_seq1.mrna1;geneID=comp1003620_c0_seq1.path1;Name=comp1003620_c0_seq1;Dir=indeterminatecoverage=87.8;identity=99.9;matches=678;mismatches=1;indels=0;unknowns=0;Target=comp1003620_c0_seq1 138 1 .;locus=RLOC_00000376
ChrX	stalkie_big_nohaplotig	exon	7181694	7181701	100	-	.	Parent=comp1003620_c0_seq1.mrna1;Target=comp1003620_c0_seq1 711 704 .
ChrX	stalkie_big_nohaplotig	exon	7191319	7191324	100	-	.	Parent=comp1003620_c0_seq1.mrna1;Target=comp1003620_c0_seq1 703 698 .
ChrX	stalkie_big_nohaplotig	exon	7200441	7200452	100	-	.	Parent=comp1003620_c0_seq1.mrna1;Target=comp1003620_c0_seq1 682 671 .
ChrX	stalkie_big_nohaplotig	exon	7202871	7202878	100	-	.	Parent=comp1003620_c0_seq1.mrna1;Target=comp1003620_c0_seq1 670 663 .
ChrX	stalkie_big_nohaplotig	exon	7204922	7204929	100	-	.	Parent=comp1003620_c0_seq1.mrna1;Target=comp1003620_c0_seq1 661 654 .
ChrX	stalkie_big_nohaplotig	exon	7215460	7216093	99	-	.	Parent=comp1003620_c0_seq1.mrna1;Target=comp1003620_c0_seq1 634 1 .
ChrX	stalkie_big_nohaplotig	CDS	7215956	7216093	.	-	0	Parent=comp1003620_c0_seq1.mrna1
ChrX	gffcl	locus	7184020	7185427	.	+	.	ID=RLOC_00000377;geneIDs=comp140749_c0_seq1.path1;transcripts=comp140749_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7184020	7185427	.	+	.	ID=comp140749_c0_seq1.mrna1;geneID=comp140749_c0_seq1.path1;Name=comp140749_c0_seq1;Dir=antisensecoverage=97.1;identity=99.2;matches=603;mismatches=4;indels=1;unknowns=0;locus=RLOC_00000377
ChrX	stalkie_big_nohaplotig	exon	7184020	7184043	100	+	.	Parent=comp140749_c0_seq1.mrna1;Target=comp140749_c0_seq1 602 625 -
ChrX	stalkie_big_nohaplotig	exon	7184844	7185427	99	+	.	Parent=comp140749_c0_seq1.mrna1;Target=comp140749_c0_seq1 19 601 -
ChrX	stalkie_big_nohaplotig	CDS	7184021	7184043	.	+	0	Parent=comp140749_c0_seq1.mrna1;Target=comp140749_c0_seq1 602 624 .
ChrX	stalkie_big_nohaplotig	CDS	7184844	7185427	.	+	1	Parent=comp140749_c0_seq1.mrna1;Target=comp140749_c0_seq1 19 601 .
ChrX	gffcl	locus	7191950	7214573	.	.	.	ID=RLOC_00000378;geneIDs=FBgn0051973.1.path1,comp74361_c0_seq1.path1;transcripts=FBgn0051973.1.mrna1,comp74361_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7191950	7214573	.	+	.	ID=FBgn0051973.1.mrna1;geneID=FBgn0051973.1.path1;Name=FBgn0051973.1;Dir=sensecoverage=100.0;identity=100.0;matches=1608;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000378
ChrX	stalkie_big_nohaplotig	exon	7191950	7192180	100	+	.	Parent=FBgn0051973.1.mrna1;Target=FBgn0051973.1 1 231 +
ChrX	stalkie_big_nohaplotig	exon	7193387	7193433	100	+	.	Parent=FBgn0051973.1.mrna1;Target=FBgn0051973.1 232 278 +
ChrX	stalkie_big_nohaplotig	exon	7208759	7208866	100	+	.	Parent=FBgn0051973.1.mrna1;Target=FBgn0051973.1 279 386 +
ChrX	stalkie_big_nohaplotig	exon	7208932	7209125	100	+	.	Parent=FBgn0051973.1.mrna1;Target=FBgn0051973.1 387 580 +
ChrX	stalkie_big_nohaplotig	exon	7210554	7210779	100	+	.	Parent=FBgn0051973.1.mrna1;Target=FBgn0051973.1 581 806 +
ChrX	stalkie_big_nohaplotig	exon	7212359	7212796	100	+	.	Parent=FBgn0051973.1.mrna1;Target=FBgn0051973.1 807 1244 +
ChrX	stalkie_big_nohaplotig	exon	7214137	7214335	100	+	.	Parent=FBgn0051973.1.mrna1;Target=FBgn0051973.1 1245 1443 +
ChrX	stalkie_big_nohaplotig	exon	7214409	7214573	100	+	.	Parent=FBgn0051973.1.mrna1;Target=FBgn0051973.1 1444 1608 +
ChrX	stalkie_big_nohaplotig	CDS	7191950	7192180	.	+	0	Parent=FBgn0051973.1.mrna1;Target=FBgn0051973.1 1 231 +
ChrX	stalkie_big_nohaplotig	CDS	7193387	7193433	.	+	0	Parent=FBgn0051973.1.mrna1;Target=FBgn0051973.1 232 278 +
ChrX	stalkie_big_nohaplotig	CDS	7208759	7208866	.	+	1	Parent=FBgn0051973.1.mrna1;Target=FBgn0051973.1 279 386 +
ChrX	stalkie_big_nohaplotig	CDS	7208932	7209125	.	+	1	Parent=FBgn0051973.1.mrna1;Target=FBgn0051973.1 387 580 +
ChrX	stalkie_big_nohaplotig	CDS	7210554	7210779	.	+	2	Parent=FBgn0051973.1.mrna1;Target=FBgn0051973.1 581 806 +
ChrX	stalkie_big_nohaplotig	CDS	7212359	7212796	.	+	1	Parent=FBgn0051973.1.mrna1;Target=FBgn0051973.1 807 1244 +
ChrX	stalkie_big_nohaplotig	CDS	7214137	7214335	.	+	1	Parent=FBgn0051973.1.mrna1;Target=FBgn0051973.1 1245 1443 +
ChrX	stalkie_big_nohaplotig	CDS	7214409	7214573	.	+	0	Parent=FBgn0051973.1.mrna1;Target=FBgn0051973.1 1444 1608 +
ChrX	stalkie_big_nohaplotig	mRNA	7210756	7211024	.	-	.	ID=comp74361_c0_seq1.mrna1;geneID=comp74361_c0_seq1.path1;Name=comp74361_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=268;mismatches=1;indels=0;unknowns=0;Target=comp74361_c0_seq1 269 1 .;CDS_Target=comp74361_c0_seq1 77 3 .;locus=RLOC_00000378
ChrX	stalkie_big_nohaplotig	exon	7210756	7211024	99	-	.	Parent=comp74361_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7210948	7211022	.	-	0	Parent=comp74361_c0_seq1.mrna1
ChrX	gffcl	locus	7214986	7217342	.	+	.	ID=RLOC_00000379;geneIDs=comp263088_c0_seq1.path1;transcripts=comp263088_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7214986	7217342	.	+	.	ID=comp263088_c0_seq1.mrna1;geneID=comp263088_c0_seq1.path1;Name=comp263088_c0_seq1;Dir=indeterminatecoverage=90.7;identity=99.8;matches=465;mismatches=1;indels=0;unknowns=0;Target=comp263088_c0_seq1 282 217 .;locus=RLOC_00000379
ChrX	stalkie_big_nohaplotig	exon	7214986	7214993	100	+	.	Parent=comp263088_c0_seq1.mrna1;Target=comp263088_c0_seq1 56 49 .
ChrX	stalkie_big_nohaplotig	exon	7215131	7215137	100	+	.	Parent=comp263088_c0_seq1.mrna1;Target=comp263088_c0_seq1 63 57 .
ChrX	stalkie_big_nohaplotig	exon	7216892	7217342	99	+	.	Parent=comp263088_c0_seq1.mrna1;Target=comp263088_c0_seq1 514 64 .
ChrX	stalkie_big_nohaplotig	CDS	7217045	7217110	.	+	0	Parent=comp263088_c0_seq1.mrna1
ChrX	gffcl	locus	7217642	7219497	.	-	.	ID=RLOC_00000380;geneIDs=comp151328_c1_seq1.path1;transcripts=comp151328_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7217642	7219497	.	-	.	ID=comp151328_c1_seq1.mrna1;geneID=comp151328_c1_seq1.path1;Name=comp151328_c1_seq1;Dir=indeterminatecoverage=99.7;identity=99.1;matches=1840;mismatches=6;indels=11;unknowns=0;Target=comp151328_c1_seq1 1847 1 .;CDS_Target=comp151328_c1_seq1 1179 1045 .;locus=RLOC_00000380
ChrX	stalkie_big_nohaplotig	exon	7217642	7219497	99	-	.	Parent=comp151328_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7218320	7218454	.	-	0	Parent=comp151328_c1_seq1.mrna1
ChrX	gffcl	locus	7220008	8711483	.	+	.	ID=RLOC_00000381;geneIDs=comp122314_c0_seq1.path1;transcripts=comp122314_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7220008	8711483	.	+	.	ID=comp122314_c0_seq1.mrna1;geneID=comp122314_c0_seq1.path1;Name=comp122314_c0_seq1;Dir=indeterminatecoverage=82.0;identity=97.4;matches=889;mismatches=19;indels=5;unknowns=0;Target=comp122314_c0_seq1 380 327 .;locus=RLOC_00000381
ChrX	stalkie_big_nohaplotig	exon	7220008	7220735	99	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 728 1 .
ChrX	stalkie_big_nohaplotig	exon	8542331	8542335	100	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 733 729 .
ChrX	stalkie_big_nohaplotig	exon	8547722	8547727	100	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 739 734 .
ChrX	stalkie_big_nohaplotig	exon	8553403	8553455	62	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 787 740 .
ChrX	stalkie_big_nohaplotig	exon	8556265	8556273	100	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 796 788 .
ChrX	stalkie_big_nohaplotig	exon	8559871	8559875	100	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 815 811 .
ChrX	stalkie_big_nohaplotig	exon	8565327	8565332	100	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 821 816 .
ChrX	stalkie_big_nohaplotig	exon	8569108	8569109	100	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 823 822 .
ChrX	stalkie_big_nohaplotig	exon	8581765	8581775	100	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 834 824 .
ChrX	stalkie_big_nohaplotig	exon	8581922	8581924	100	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 837 835 .
ChrX	stalkie_big_nohaplotig	exon	8587307	8587310	100	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 841 838 .
ChrX	stalkie_big_nohaplotig	exon	8589099	8589110	100	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 853 842 .
ChrX	stalkie_big_nohaplotig	exon	8606648	8606653	100	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 859 854 .
ChrX	stalkie_big_nohaplotig	exon	8625282	8625287	100	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 865 860 .
ChrX	stalkie_big_nohaplotig	exon	8632234	8632245	100	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 877 866 .
ChrX	stalkie_big_nohaplotig	exon	8632550	8632563	85	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 891 878 .
ChrX	stalkie_big_nohaplotig	exon	8634219	8634220	100	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 893 892 .
ChrX	stalkie_big_nohaplotig	exon	8658346	8658351	100	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 899 894 .
ChrX	stalkie_big_nohaplotig	exon	8688839	8688844	100	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 905 900 .
ChrX	stalkie_big_nohaplotig	exon	8696210	8696213	100	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 909 906 .
ChrX	stalkie_big_nohaplotig	exon	8698607	8698609	100	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 912 910 .
ChrX	stalkie_big_nohaplotig	exon	8703655	8703656	100	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 914 913 .
ChrX	stalkie_big_nohaplotig	exon	8711477	8711483	100	+	.	Parent=comp122314_c0_seq1.mrna1;Target=comp122314_c0_seq1 921 915 .
ChrX	stalkie_big_nohaplotig	CDS	7220334	7220387	.	+	0	Parent=comp122314_c0_seq1.mrna1
ChrX	gffcl	locus	7220740	7221365	.	+	.	ID=RLOC_00000382;geneIDs=comp134907_c0_seq1.path1;transcripts=comp134907_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7220740	7221365	.	+	.	ID=comp134907_c0_seq1.mrna1;geneID=comp134907_c0_seq1.path1;Name=comp134907_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=624;mismatches=0;indels=2;unknowns=0;Target=comp134907_c0_seq1 624 1 .;CDS_Target=comp134907_c0_seq1 225 163 .;locus=RLOC_00000382
ChrX	stalkie_big_nohaplotig	exon	7220740	7221365	99	+	.	Parent=comp134907_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7220904	7220966	.	+	0	Parent=comp134907_c0_seq1.mrna1
ChrX	gffcl	locus	7233842	7256274	.	-	.	ID=RLOC_00000383;geneIDs=comp157642_c0_seq1.path2;transcripts=comp157642_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	7233842	7256274	.	-	.	ID=comp157642_c0_seq1.mrna2;geneID=comp157642_c0_seq1.path2;Name=comp157642_c0_seq1;Dir=antisensecoverage=99.9;identity=97.7;matches=1021;mismatches=12;indels=12;unknowns=0;locus=RLOC_00000383
ChrX	stalkie_big_nohaplotig	exon	7233842	7234059	100	-	.	Parent=comp157642_c0_seq1.mrna2;Target=comp157642_c0_seq1 2 219 -
ChrX	stalkie_big_nohaplotig	exon	7235649	7235907	98	-	.	Parent=comp157642_c0_seq1.mrna2;Target=comp157642_c0_seq1 220 478 -
ChrX	stalkie_big_nohaplotig	exon	7243609	7243626	100	-	.	Parent=comp157642_c0_seq1.mrna2;Target=comp157642_c0_seq1 479 496 -
ChrX	stalkie_big_nohaplotig	exon	7243689	7243800	95	-	.	Parent=comp157642_c0_seq1.mrna2;Target=comp157642_c0_seq1 497 611 -
ChrX	stalkie_big_nohaplotig	exon	7249439	7249551	94	-	.	Parent=comp157642_c0_seq1.mrna2;Target=comp157642_c0_seq1 612 724 -
ChrX	stalkie_big_nohaplotig	exon	7255953	7256274	96	-	.	Parent=comp157642_c0_seq1.mrna2;Target=comp157642_c0_seq1 725 1037 -
ChrX	stalkie_big_nohaplotig	CDS	7243717	7243800	.	-	0	Parent=comp157642_c0_seq1.mrna2;Target=comp157642_c0_seq1 528 611 .
ChrX	stalkie_big_nohaplotig	CDS	7249439	7249551	.	-	2	Parent=comp157642_c0_seq1.mrna2;Target=comp157642_c0_seq1 612 724 .
ChrX	stalkie_big_nohaplotig	CDS	7255953	7256115	.	-	0	Parent=comp157642_c0_seq1.mrna2;Target=comp157642_c0_seq1 725 878 .
ChrX	gffcl	locus	7257751	7258194	.	-	.	ID=RLOC_00000384;geneIDs=FBgn0052672.2.path1;transcripts=FBgn0052672.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7257751	7258194	.	-	.	ID=FBgn0052672.2.mrna1;geneID=FBgn0052672.2.path1;Name=FBgn0052672.2;Dir=indeterminatecoverage=100.0;identity=99.8;matches=443;mismatches=1;indels=0;unknowns=0;Target=FBgn0052672.2 444 1 .;locus=RLOC_00000384
ChrX	stalkie_big_nohaplotig	exon	7257751	7258194	99	-	.	Parent=FBgn0052672.2.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7257751	7258194	.	-	0	Parent=FBgn0052672.2.mrna1
ChrX	gffcl	locus	7259633	7260564	.	-	.	ID=RLOC_00000385;geneIDs=comp153430_c0_seq1.path1;transcripts=comp153430_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7259633	7260564	.	-	.	ID=comp153430_c0_seq1.mrna1;geneID=comp153430_c0_seq1.path1;Name=comp153430_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=928;mismatches=4;indels=0;unknowns=0;Target=comp153430_c0_seq1 932 1 .;CDS_Target=comp153430_c0_seq1 120 1 .;locus=RLOC_00000385
ChrX	stalkie_big_nohaplotig	exon	7259633	7260564	99	-	.	Parent=comp153430_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7260445	7260564	.	-	0	Parent=comp153430_c0_seq1.mrna1
ChrX	gffcl	locus	7260583	7260920	.	+	.	ID=RLOC_00000386;geneIDs=comp134909_c0_seq1.path1;transcripts=comp134909_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7260583	7260920	.	+	.	ID=comp134909_c0_seq1.mrna1;geneID=comp134909_c0_seq1.path1;Name=comp134909_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=337;mismatches=1;indels=0;unknowns=0;Target=comp134909_c0_seq1 338 1 .;CDS_Target=comp134909_c0_seq1 226 185 .;locus=RLOC_00000386
ChrX	stalkie_big_nohaplotig	exon	7260583	7260920	99	+	.	Parent=comp134909_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7260767	7260808	.	+	0	Parent=comp134909_c0_seq1.mrna1
ChrX	gffcl	locus	7261101	7261375	.	-	.	ID=RLOC_00000387;geneIDs=comp152078_c0_seq1.path1;transcripts=comp152078_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7261101	7261375	.	-	.	ID=comp152078_c0_seq1.mrna1;geneID=comp152078_c0_seq1.path1;Name=comp152078_c0_seq1;Dir=indeterminatecoverage=93.6;identity=98.2;matches=271;mismatches=4;indels=1;unknowns=0;Target=comp152078_c0_seq1 295 20 .;CDS_Target=comp152078_c0_seq1 48 22 .;locus=RLOC_00000387
ChrX	stalkie_big_nohaplotig	exon	7261101	7261375	98	-	.	Parent=comp152078_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7261347	7261373	.	-	0	Parent=comp152078_c0_seq1.mrna1
ChrX	gffcl	locus	7276447	7322683	.	.	.	ID=RLOC_00000388;geneIDs=FBgn0038760.path1,comp65482_c0_seq1.path1,comp143277_c0_seq1.path1;transcripts=comp65482_c0_seq1.mrna1,comp143277_c0_seq1.mrna1,FBgn0038760.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7276447	7277190	.	+	.	ID=comp65482_c0_seq1.mrna1;geneID=comp65482_c0_seq1.path1;Name=comp65482_c0_seq1;Dir=indeterminatecoverage=97.8;identity=99.9;matches=743;mismatches=1;indels=0;unknowns=0;Target=comp65482_c0_seq1 745 2 .;CDS_Target=comp65482_c0_seq1 435 4 .;locus=RLOC_00000388
ChrX	stalkie_big_nohaplotig	exon	7276447	7277190	99	+	.	Parent=comp65482_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7276449	7276880	.	+	0	Parent=comp65482_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7276543	7322683	.	+	.	ID=comp143277_c0_seq1.mrna1;geneID=comp143277_c0_seq1.path1;Name=comp143277_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.2;matches=536;mismatches=40;indels=12;unknowns=0;locus=RLOC_00000388
ChrX	stalkie_big_nohaplotig	exon	7276543	7276704	80	+	.	Parent=comp143277_c0_seq1.mrna1;Target=comp143277_c0_seq1 162 1 .
ChrX	stalkie_big_nohaplotig	exon	7280804	7280806	100	+	.	Parent=comp143277_c0_seq1.mrna1;Target=comp143277_c0_seq1 165 163 .
ChrX	stalkie_big_nohaplotig	exon	7287838	7287840	100	+	.	Parent=comp143277_c0_seq1.mrna1;Target=comp143277_c0_seq1 168 166 .
ChrX	stalkie_big_nohaplotig	exon	7293688	7293694	100	+	.	Parent=comp143277_c0_seq1.mrna1;Target=comp143277_c0_seq1 175 169 .
ChrX	stalkie_big_nohaplotig	exon	7300451	7300459	100	+	.	Parent=comp143277_c0_seq1.mrna1;Target=comp143277_c0_seq1 184 176 .
ChrX	stalkie_big_nohaplotig	exon	7306125	7306131	85	+	.	Parent=comp143277_c0_seq1.mrna1;Target=comp143277_c0_seq1 191 185 .
ChrX	stalkie_big_nohaplotig	exon	7311365	7311400	59	+	.	Parent=comp143277_c0_seq1.mrna1;Target=comp143277_c0_seq1 237 192 .
ChrX	stalkie_big_nohaplotig	exon	7317250	7317257	100	+	.	Parent=comp143277_c0_seq1.mrna1;Target=comp143277_c0_seq1 245 238 .
ChrX	stalkie_big_nohaplotig	exon	7321933	7321941	100	+	.	Parent=comp143277_c0_seq1.mrna1;Target=comp143277_c0_seq1 281 273 .
ChrX	stalkie_big_nohaplotig	exon	7322351	7322683	99	+	.	Parent=comp143277_c0_seq1.mrna1;Target=comp143277_c0_seq1 621 289 .
ChrX	stalkie_big_nohaplotig	CDS	7276545	7276704	.	+	0	Parent=comp143277_c0_seq1.mrna1;Target=comp143277_c0_seq1 162 3 .
ChrX	stalkie_big_nohaplotig	CDS	7280804	7280806	.	+	2	Parent=comp143277_c0_seq1.mrna1;Target=comp143277_c0_seq1 165 163 .
ChrX	stalkie_big_nohaplotig	CDS	7287838	7287840	.	+	2	Parent=comp143277_c0_seq1.mrna1;Target=comp143277_c0_seq1 168 166 .
ChrX	stalkie_big_nohaplotig	CDS	7293688	7293694	.	+	2	Parent=comp143277_c0_seq1.mrna1;Target=comp143277_c0_seq1 175 169 .
ChrX	stalkie_big_nohaplotig	CDS	7300451	7300459	.	+	1	Parent=comp143277_c0_seq1.mrna1;Target=comp143277_c0_seq1 184 176 .
ChrX	stalkie_big_nohaplotig	CDS	7306125	7306131	.	+	1	Parent=comp143277_c0_seq1.mrna1;Target=comp143277_c0_seq1 191 185 .
ChrX	stalkie_big_nohaplotig	CDS	7311365	7311400	.	+	0	Parent=comp143277_c0_seq1.mrna1;Target=comp143277_c0_seq1 237 192 .
ChrX	stalkie_big_nohaplotig	CDS	7317250	7317257	.	+	0	Parent=comp143277_c0_seq1.mrna1;Target=comp143277_c0_seq1 245 238 .
ChrX	stalkie_big_nohaplotig	mRNA	7311362	7312081	.	-	.	ID=FBgn0038760.mrna1;geneID=FBgn0038760.path1;Name=FBgn0038760;Dir=indeterminatecoverage=100.0;identity=99.9;matches=719;mismatches=1;indels=0;unknowns=0;Target=FBgn0038760 720 1 .;locus=RLOC_00000388
ChrX	stalkie_big_nohaplotig	exon	7311362	7312081	99	-	.	Parent=FBgn0038760.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7311362	7312081	.	-	0	Parent=FBgn0038760.mrna1
ChrX	gffcl	locus	7304533	7304786	.	-	.	ID=RLOC_00000389;geneIDs=FBgn0000253.6.path1;transcripts=FBgn0000253.6.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7304533	7304786	.	-	.	ID=FBgn0000253.6.mrna1;geneID=FBgn0000253.6.path1;Name=FBgn0000253.6;Dir=indeterminatecoverage=51.6;identity=100.0;matches=254;mismatches=0;indels=0;unknowns=0;Target=FBgn0000253.6 254 1 .;CDS_Target=FBgn0000253.6 252 1 .;locus=RLOC_00000389
ChrX	stalkie_big_nohaplotig	exon	7304533	7304786	100	-	.	Parent=FBgn0000253.6.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7304535	7304786	.	-	0	Parent=FBgn0000253.6.mrna1
ChrX	gffcl	locus	7305258	7305746	.	-	.	ID=RLOC_00000390;geneIDs=FBgn0000253.11.path1;transcripts=FBgn0000253.11.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7305258	7305746	.	-	.	ID=FBgn0000253.11.mrna1;geneID=FBgn0000253.11.path1;Name=FBgn0000253.11;Dir=indeterminatecoverage=100.0;identity=100.0;matches=489;mismatches=0;indels=0;unknowns=0;Target=FBgn0000253.11 489 1 .;locus=RLOC_00000390
ChrX	stalkie_big_nohaplotig	exon	7305258	7305746	100	-	.	Parent=FBgn0000253.11.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7305258	7305746	.	-	0	Parent=FBgn0000253.11.mrna1
ChrX	gffcl	locus	7308845	7309476	.	+	.	ID=RLOC_00000391;geneIDs=FBgn0010412.1.path2;transcripts=FBgn0010412.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	7308845	7309476	.	+	.	ID=FBgn0010412.1.mrna2;geneID=FBgn0010412.1.path2;Name=FBgn0010412.1;Dir=sensecoverage=100.0;identity=99.3;matches=554;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000391
ChrX	stalkie_big_nohaplotig	exon	7308845	7308960	97	+	.	Parent=FBgn0010412.1.mrna2;Target=FBgn0010412.1 1 116 +
ChrX	stalkie_big_nohaplotig	exon	7309035	7309476	99	+	.	Parent=FBgn0010412.1.mrna2;Target=FBgn0010412.1 117 558 +
ChrX	stalkie_big_nohaplotig	CDS	7308845	7308960	.	+	0	Parent=FBgn0010412.1.mrna2;Target=FBgn0010412.1 1 116 +
ChrX	stalkie_big_nohaplotig	CDS	7309035	7309476	.	+	1	Parent=FBgn0010412.1.mrna2;Target=FBgn0010412.1 117 558 +
ChrX	gffcl	locus	7316003	7316974	.	+	.	ID=RLOC_00000392;geneIDs=comp121503_c0_seq1.path1;transcripts=comp121503_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7316003	7316974	.	+	.	ID=comp121503_c0_seq1.mrna1;geneID=comp121503_c0_seq1.path1;Name=comp121503_c0_seq1;Dir=antisensecoverage=98.8;identity=99.5;matches=915;mismatches=5;indels=0;unknowns=0;Target=comp121503_c0_seq1 264 710 .;locus=RLOC_00000392
ChrX	stalkie_big_nohaplotig	exon	7316003	7316676	99	+	.	Parent=comp121503_c0_seq1.mrna1;Target=comp121503_c0_seq1 247 920 -
ChrX	stalkie_big_nohaplotig	exon	7316729	7316974	99	+	.	Parent=comp121503_c0_seq1.mrna1;Target=comp121503_c0_seq1 1 246 -
ChrX	stalkie_big_nohaplotig	CDS	7316213	7316659	.	+	0	Parent=comp121503_c0_seq1.mrna1
ChrX	gffcl	locus	7332861	7333690	.	+	.	ID=RLOC_00000393;geneIDs=comp148480_c1_seq1.path1;transcripts=comp148480_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7332861	7333690	.	+	.	ID=comp148480_c1_seq1.mrna1;geneID=comp148480_c1_seq1.path1;Name=comp148480_c1_seq1;Dir=indeterminatecoverage=97.9;identity=99.9;matches=829;mismatches=1;indels=0;unknowns=0;Target=comp148480_c1_seq1 848 19 .;CDS_Target=comp148480_c1_seq1 536 378 .;locus=RLOC_00000393
ChrX	stalkie_big_nohaplotig	exon	7332861	7333690	99	+	.	Parent=comp148480_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7333220	7333378	.	+	0	Parent=comp148480_c1_seq1.mrna1
ChrX	gffcl	locus	7347106	7347751	.	-	.	ID=RLOC_00000394;geneIDs=comp204298_c0_seq1.path1;transcripts=comp204298_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7347106	7347751	.	-	.	ID=comp204298_c0_seq1.mrna1;geneID=comp204298_c0_seq1.path1;Name=comp204298_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.5;matches=643;mismatches=3;indels=0;unknowns=0;Target=comp204298_c0_seq1 646 1 .;CDS_Target=comp204298_c0_seq1 602 132 .;locus=RLOC_00000394
ChrX	stalkie_big_nohaplotig	exon	7347106	7347751	99	-	.	Parent=comp204298_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7347150	7347620	.	-	0	Parent=comp204298_c0_seq1.mrna1
ChrX	gffcl	locus	7358080	7358543	.	-	.	ID=RLOC_00000395;geneIDs=comp135446_c1_seq1.path1;transcripts=comp135446_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7358080	7358543	.	-	.	ID=comp135446_c1_seq1.mrna1;geneID=comp135446_c1_seq1.path1;Name=comp135446_c1_seq1;Dir=indeterminatecoverage=95.7;identity=100.0;matches=464;mismatches=0;indels=0;unknowns=0;Target=comp135446_c1_seq1 485 22 .;CDS_Target=comp135446_c1_seq1 484 347 .;locus=RLOC_00000395
ChrX	stalkie_big_nohaplotig	exon	7358080	7358543	100	-	.	Parent=comp135446_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7358081	7358218	.	-	0	Parent=comp135446_c1_seq1.mrna1
ChrX	gffcl	locus	7362795	7363587	.	+	.	ID=RLOC_00000396;geneIDs=comp131192_c0_seq1.path1;transcripts=comp131192_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7362795	7363587	.	+	.	ID=comp131192_c0_seq1.mrna1;geneID=comp131192_c0_seq1.path1;Name=comp131192_c0_seq1;Dir=indeterminatecoverage=98.5;identity=99.9;matches=792;mismatches=1;indels=0;unknowns=0;Target=comp131192_c0_seq1 794 2 .;CDS_Target=comp131192_c0_seq1 115 2 .;locus=RLOC_00000396
ChrX	stalkie_big_nohaplotig	exon	7362795	7363587	99	+	.	Parent=comp131192_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7362795	7362908	.	+	0	Parent=comp131192_c0_seq1.mrna1
ChrX	gffcl	locus	7408412	7408949	.	+	.	ID=RLOC_00000398;geneIDs=comp130713_c0_seq1.path1;transcripts=comp130713_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7408412	7408949	.	+	.	ID=comp130713_c0_seq1.mrna1;geneID=comp130713_c0_seq1.path1;Name=comp130713_c0_seq1;Dir=indeterminatecoverage=95.9;identity=100.0;matches=538;mismatches=0;indels=0;unknowns=0;Target=comp130713_c0_seq1 560 23 .;CDS_Target=comp130713_c0_seq1 511 185 .;locus=RLOC_00000398
ChrX	stalkie_big_nohaplotig	exon	7408412	7408949	100	+	.	Parent=comp130713_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7408574	7408900	.	+	0	Parent=comp130713_c0_seq1.mrna1
ChrX	gffcl	locus	7498823	7499264	.	-	.	ID=RLOC_00000399;geneIDs=comp150881_c0_seq1.path1;transcripts=comp150881_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7498823	7499264	.	-	.	ID=comp150881_c0_seq1.mrna1;geneID=comp150881_c0_seq1.path1;Name=comp150881_c0_seq1;Dir=indeterminatecoverage=94.8;identity=98.4;matches=435;mismatches=7;indels=0;unknowns=0;Target=comp150881_c0_seq1 466 25 .;CDS_Target=comp150881_c0_seq1 236 108 .;locus=RLOC_00000399
ChrX	stalkie_big_nohaplotig	exon	7498823	7499264	98	-	.	Parent=comp150881_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7499053	7499181	.	-	0	Parent=comp150881_c0_seq1.mrna1
ChrX	gffcl	locus	7504878	7505323	.	-	.	ID=RLOC_00000400;geneIDs=FBgn0011760.1.path1;transcripts=FBgn0011760.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7504878	7505323	.	-	.	ID=FBgn0011760.1.mrna1;geneID=FBgn0011760.1.path1;Name=FBgn0011760.1;Dir=sensecoverage=100.0;identity=100.0;matches=312;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000400
ChrX	stalkie_big_nohaplotig	exon	7504878	7505158	100	-	.	Parent=FBgn0011760.1.mrna1;Target=FBgn0011760.1 32 312 +
ChrX	stalkie_big_nohaplotig	exon	7505293	7505323	100	-	.	Parent=FBgn0011760.1.mrna1;Target=FBgn0011760.1 1 31 +
ChrX	stalkie_big_nohaplotig	CDS	7504878	7505158	.	-	2	Parent=FBgn0011760.1.mrna1;Target=FBgn0011760.1 32 312 +
ChrX	stalkie_big_nohaplotig	CDS	7505293	7505323	.	-	0	Parent=FBgn0011760.1.mrna1;Target=FBgn0011760.1 1 31 +
ChrX	gffcl	locus	7524079	7524901	.	-	.	ID=RLOC_00000401;geneIDs=comp143420_c0_seq1.path1;transcripts=comp143420_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7524079	7524901	.	-	.	ID=comp143420_c0_seq1.mrna1;geneID=comp143420_c0_seq1.path1;Name=comp143420_c0_seq1;Dir=antisensecoverage=98.0;identity=99.5;matches=736;mismatches=3;indels=1;unknowns=0;Target=comp143420_c0_seq1 335 622 .;locus=RLOC_00000401
ChrX	stalkie_big_nohaplotig	exon	7524079	7524358	98	-	.	Parent=comp143420_c0_seq1.mrna1;Target=comp143420_c0_seq1 16 296 -
ChrX	stalkie_big_nohaplotig	exon	7524443	7524901	99	-	.	Parent=comp143420_c0_seq1.mrna1;Target=comp143420_c0_seq1 297 755 -
ChrX	stalkie_big_nohaplotig	CDS	7524481	7524768	.	-	0	Parent=comp143420_c0_seq1.mrna1
ChrX	gffcl	locus	7533018	7533822	.	-	.	ID=RLOC_00000402;geneIDs=comp119228_c0_seq1.path1;transcripts=comp119228_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7533018	7533822	.	-	.	ID=comp119228_c0_seq1.mrna1;geneID=comp119228_c0_seq1.path1;Name=comp119228_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.5;matches=801;mismatches=4;indels=0;unknowns=0;Target=comp119228_c0_seq1 805 1 .;CDS_Target=comp119228_c0_seq1 439 107 .;locus=RLOC_00000402
ChrX	stalkie_big_nohaplotig	exon	7533018	7533822	99	-	.	Parent=comp119228_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7533384	7533716	.	-	0	Parent=comp119228_c0_seq1.mrna1
ChrX	gffcl	locus	7540173	7541896	.	-	.	ID=RLOC_00000403;geneIDs=comp149566_c0_seq1.path1;transcripts=comp149566_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7540173	7541896	.	-	.	ID=comp149566_c0_seq1.mrna1;geneID=comp149566_c0_seq1.path1;Name=comp149566_c0_seq1;Dir=antisensecoverage=97.9;identity=98.8;matches=1305;mismatches=16;indels=0;unknowns=0;locus=RLOC_00000403
ChrX	stalkie_big_nohaplotig	exon	7540173	7540615	98	-	.	Parent=comp149566_c0_seq1.mrna1;Target=comp149566_c0_seq1 30 472 -
ChrX	stalkie_big_nohaplotig	exon	7540698	7541066	98	-	.	Parent=comp149566_c0_seq1.mrna1;Target=comp149566_c0_seq1 473 841 -
ChrX	stalkie_big_nohaplotig	exon	7541388	7541896	99	-	.	Parent=comp149566_c0_seq1.mrna1;Target=comp149566_c0_seq1 842 1350 -
ChrX	stalkie_big_nohaplotig	CDS	7541061	7541066	.	-	0	Parent=comp149566_c0_seq1.mrna1;Target=comp149566_c0_seq1 836 841 .
ChrX	stalkie_big_nohaplotig	CDS	7541388	7541804	.	-	0	Parent=comp149566_c0_seq1.mrna1;Target=comp149566_c0_seq1 842 1258 .
ChrX	gffcl	locus	7556237	7661423	.	+	.	ID=RLOC_00000404;geneIDs=comp156402_c0_seq1.path1;transcripts=comp156402_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7556237	7661423	.	+	.	ID=comp156402_c0_seq1.mrna1;geneID=comp156402_c0_seq1.path1;Name=comp156402_c0_seq1;Dir=sensecoverage=100.0;identity=99.0;matches=1132;mismatches=11;indels=0;unknowns=0;Target=comp156402_c0_seq1 1177 1254 +;locus=RLOC_00000404
ChrX	stalkie_big_nohaplotig	exon	7556237	7556408	97	+	.	Parent=comp156402_c0_seq1.mrna1;Target=comp156402_c0_seq1 1 172 +
ChrX	stalkie_big_nohaplotig	exon	7559034	7559420	99	+	.	Parent=comp156402_c0_seq1.mrna1;Target=comp156402_c0_seq1 173 559 +
ChrX	stalkie_big_nohaplotig	exon	7559841	7559842	100	+	.	Parent=comp156402_c0_seq1.mrna1;Target=comp156402_c0_seq1 560 561 +
ChrX	stalkie_big_nohaplotig	exon	7591788	7591789	100	+	.	Parent=comp156402_c0_seq1.mrna1;Target=comp156402_c0_seq1 562 563 +
ChrX	stalkie_big_nohaplotig	exon	7615660	7615665	100	+	.	Parent=comp156402_c0_seq1.mrna1;Target=comp156402_c0_seq1 564 569 +
ChrX	stalkie_big_nohaplotig	exon	7629942	7629947	100	+	.	Parent=comp156402_c0_seq1.mrna1;Target=comp156402_c0_seq1 570 575 +
ChrX	stalkie_big_nohaplotig	exon	7635868	7635870	100	+	.	Parent=comp156402_c0_seq1.mrna1;Target=comp156402_c0_seq1 576 578 +
ChrX	stalkie_big_nohaplotig	exon	7641660	7641661	100	+	.	Parent=comp156402_c0_seq1.mrna1;Target=comp156402_c0_seq1 579 580 +
ChrX	stalkie_big_nohaplotig	exon	7648346	7648351	100	+	.	Parent=comp156402_c0_seq1.mrna1;Target=comp156402_c0_seq1 581 586 +
ChrX	stalkie_big_nohaplotig	exon	7648962	7648964	100	+	.	Parent=comp156402_c0_seq1.mrna1;Target=comp156402_c0_seq1 587 589 +
ChrX	stalkie_big_nohaplotig	exon	7659294	7659410	99	+	.	Parent=comp156402_c0_seq1.mrna1;Target=comp156402_c0_seq1 590 706 +
ChrX	stalkie_big_nohaplotig	exon	7659670	7659926	98	+	.	Parent=comp156402_c0_seq1.mrna1;Target=comp156402_c0_seq1 881 1137 +
ChrX	stalkie_big_nohaplotig	exon	7661244	7661423	99	+	.	Parent=comp156402_c0_seq1.mrna1;Target=comp156402_c0_seq1 1138 1317 +
ChrX	stalkie_big_nohaplotig	CDS	7661283	7661360	.	+	0	Parent=comp156402_c0_seq1.mrna1
ChrX	gffcl	locus	7575263	7577082	.	-	.	ID=RLOC_00000405;geneIDs=comp142986_c0_seq1.path1;transcripts=comp142986_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7575263	7577082	.	-	.	ID=comp142986_c0_seq1.mrna1;geneID=comp142986_c0_seq1.path1;Name=comp142986_c0_seq1;Dir=antisensecoverage=90.2;identity=99.4;matches=541;mismatches=3;indels=0;unknowns=0;Target=comp142986_c0_seq1 83 379 .;locus=RLOC_00000405
ChrX	stalkie_big_nohaplotig	exon	7575263	7575619	99	-	.	Parent=comp142986_c0_seq1.mrna1;Target=comp142986_c0_seq1 47 403 -
ChrX	stalkie_big_nohaplotig	exon	7575685	7575711	100	-	.	Parent=comp142986_c0_seq1.mrna1;Target=comp142986_c0_seq1 404 430 -
ChrX	stalkie_big_nohaplotig	exon	7576923	7577082	98	-	.	Parent=comp142986_c0_seq1.mrna1;Target=comp142986_c0_seq1 431 590 -
ChrX	stalkie_big_nohaplotig	CDS	7575299	7575595	.	-	0	Parent=comp142986_c0_seq1.mrna1
ChrX	gffcl	locus	7580796	7601887	.	+	.	ID=RLOC_00000406;geneIDs=comp149984_c0_seq1.path1;transcripts=comp149984_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7580796	7601887	.	+	.	ID=comp149984_c0_seq1.mrna1;geneID=comp149984_c0_seq1.path1;Name=comp149984_c0_seq1;Dir=sensecoverage=96.7;identity=99.8;matches=578;mismatches=0;indels=1;unknowns=0;locus=RLOC_00000406
ChrX	stalkie_big_nohaplotig	exon	7580796	7580964	99	+	.	Parent=comp149984_c0_seq1.mrna1;Target=comp149984_c0_seq1 1 170 +
ChrX	stalkie_big_nohaplotig	exon	7601479	7601887	100	+	.	Parent=comp149984_c0_seq1.mrna1;Target=comp149984_c0_seq1 171 579 +
ChrX	stalkie_big_nohaplotig	CDS	7580963	7580964	.	+	0	Parent=comp149984_c0_seq1.mrna1;Target=comp149984_c0_seq1 169 170 +
ChrX	stalkie_big_nohaplotig	CDS	7601479	7601755	.	+	1	Parent=comp149984_c0_seq1.mrna1;Target=comp149984_c0_seq1 171 447 +
ChrX	gffcl	locus	7589546	7590346	.	-	.	ID=RLOC_00000407;geneIDs=comp146897_c0_seq1.path1;transcripts=comp146897_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7589546	7590346	.	-	.	ID=comp146897_c0_seq1.mrna1;geneID=comp146897_c0_seq1.path1;Name=comp146897_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=640;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000407
ChrX	stalkie_big_nohaplotig	exon	7589546	7589977	99	-	.	Parent=comp146897_c0_seq1.mrna1;Target=comp146897_c0_seq1 211 642 +
ChrX	stalkie_big_nohaplotig	exon	7590068	7590153	100	-	.	Parent=comp146897_c0_seq1.mrna1;Target=comp146897_c0_seq1 125 210 +
ChrX	stalkie_big_nohaplotig	exon	7590223	7590346	99	-	.	Parent=comp146897_c0_seq1.mrna1;Target=comp146897_c0_seq1 1 124 +
ChrX	stalkie_big_nohaplotig	CDS	7589615	7589977	.	-	0	Parent=comp146897_c0_seq1.mrna1;Target=comp146897_c0_seq1 211 573 +
ChrX	stalkie_big_nohaplotig	CDS	7590068	7590082	.	-	0	Parent=comp146897_c0_seq1.mrna1;Target=comp146897_c0_seq1 196 210 +
ChrX	gffcl	locus	7603466	7603510	.	+	.	ID=RLOC_00000409;geneIDs=comp151585_c0_seq1.path2;transcripts=comp151585_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	7603466	7603510	.	+	.	ID=comp151585_c0_seq1.mrna2;geneID=comp151585_c0_seq1.path2;Name=comp151585_c0_seq1;Dir=indeterminatecoverage=4.5;identity=100.0;matches=45;mismatches=0;indels=0;unknowns=0;Target=comp151585_c0_seq1 992 948 .;locus=RLOC_00000409
ChrX	stalkie_big_nohaplotig	exon	7603466	7603510	100	+	.	Parent=comp151585_c0_seq1.mrna2
ChrX	gffcl	locus	7622534	7623842	.	+	.	ID=RLOC_00000410;geneIDs=comp135684_c0_seq1.path1;transcripts=comp135684_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7622534	7623842	.	+	.	ID=comp135684_c0_seq1.mrna1;geneID=comp135684_c0_seq1.path1;Name=comp135684_c0_seq1;Dir=sensecoverage=97.3;identity=98.5;matches=961;mismatches=5;indels=10;unknowns=0;Target=comp135684_c0_seq1 14 460 +;locus=RLOC_00000410
ChrX	stalkie_big_nohaplotig	exon	7622534	7623013	99	+	.	Parent=comp135684_c0_seq1.mrna1;Target=comp135684_c0_seq1 12 491 +
ChrX	stalkie_big_nohaplotig	exon	7623086	7623160	87	+	.	Parent=comp135684_c0_seq1.mrna1;Target=comp135684_c0_seq1 492 569 +
ChrX	stalkie_big_nohaplotig	exon	7623227	7623285	100	+	.	Parent=comp135684_c0_seq1.mrna1;Target=comp135684_c0_seq1 570 628 +
ChrX	stalkie_big_nohaplotig	exon	7623341	7623413	100	+	.	Parent=comp135684_c0_seq1.mrna1;Target=comp135684_c0_seq1 629 701 +
ChrX	stalkie_big_nohaplotig	exon	7623486	7623563	100	+	.	Parent=comp135684_c0_seq1.mrna1;Target=comp135684_c0_seq1 702 779 +
ChrX	stalkie_big_nohaplotig	exon	7623639	7623842	98	+	.	Parent=comp135684_c0_seq1.mrna1;Target=comp135684_c0_seq1 780 984 +
ChrX	stalkie_big_nohaplotig	CDS	7622536	7622982	.	+	0	Parent=comp135684_c0_seq1.mrna1
ChrX	gffcl	locus	7624903	7625403	.	+	.	ID=RLOC_00000411;geneIDs=FBgn0000253.13.path1;transcripts=FBgn0000253.13.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7624903	7625403	.	+	.	ID=FBgn0000253.13.mrna1;geneID=FBgn0000253.13.path1;Name=FBgn0000253.13;Dir=indeterminatecoverage=100.0;identity=99.6;matches=499;mismatches=2;indels=0;unknowns=0;Target=FBgn0000253.13 501 1 .;locus=RLOC_00000411
ChrX	stalkie_big_nohaplotig	exon	7624903	7625403	99	+	.	Parent=FBgn0000253.13.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7624903	7625403	.	+	0	Parent=FBgn0000253.13.mrna1
ChrX	gffcl	locus	7649915	7650278	.	-	.	ID=RLOC_00000412;geneIDs=FBgn0011586.5.path1;transcripts=FBgn0011586.5.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7649915	7650278	.	-	.	ID=FBgn0011586.5.mrna1;geneID=FBgn0011586.5.path1;Name=FBgn0011586.5;Dir=indeterminatecoverage=96.3;identity=98.6;matches=359;mismatches=5;indels=0;unknowns=0;Target=FBgn0011586.5 378 15 .;CDS_Target=FBgn0011586.5 378 16 .;locus=RLOC_00000412
ChrX	stalkie_big_nohaplotig	exon	7649915	7650278	98	-	.	Parent=FBgn0011586.5.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7649915	7650277	.	-	0	Parent=FBgn0011586.5.mrna1
ChrX	gffcl	locus	7657311	7657844	.	+	.	ID=RLOC_00000413;geneIDs=comp145321_c0_seq1.path1;transcripts=comp145321_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7657311	7657844	.	+	.	ID=comp145321_c0_seq1.mrna1;geneID=comp145321_c0_seq1.path1;Name=comp145321_c0_seq1;Dir=indeterminatecoverage=99.8;identity=96.0;matches=528;mismatches=6;indels=16;unknowns=0;Target=comp145321_c0_seq1 551 2 .;CDS_Target=comp145321_c0_seq1 369 220 .;locus=RLOC_00000413
ChrX	stalkie_big_nohaplotig	exon	7657311	7657844	96	+	.	Parent=comp145321_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7657516	7657665	.	+	0	Parent=comp145321_c0_seq1.mrna1
ChrX	gffcl	locus	7680346	7680977	.	-	.	ID=RLOC_00000414;geneIDs=FBgn0010412.1.path1;transcripts=FBgn0010412.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7680346	7680977	.	-	.	ID=FBgn0010412.1.mrna1;geneID=FBgn0010412.1.path1;Name=FBgn0010412.1;Dir=sensecoverage=100.0;identity=99.6;matches=556;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000414
ChrX	stalkie_big_nohaplotig	exon	7680346	7680787	99	-	.	Parent=FBgn0010412.1.mrna1;Target=FBgn0010412.1 117 558 +
ChrX	stalkie_big_nohaplotig	exon	7680862	7680977	100	-	.	Parent=FBgn0010412.1.mrna1;Target=FBgn0010412.1 1 116 +
ChrX	stalkie_big_nohaplotig	CDS	7680346	7680787	.	-	1	Parent=FBgn0010412.1.mrna1;Target=FBgn0010412.1 117 558 +
ChrX	stalkie_big_nohaplotig	CDS	7680862	7680977	.	-	0	Parent=FBgn0010412.1.mrna1;Target=FBgn0010412.1 1 116 +
ChrX	gffcl	locus	7684123	7684742	.	+	.	ID=RLOC_00000415;geneIDs=comp136797_c0_seq1.path1;transcripts=comp136797_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7684123	7684742	.	+	.	ID=comp136797_c0_seq1.mrna1;geneID=comp136797_c0_seq1.path1;Name=comp136797_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=620;mismatches=0;indels=0;unknowns=0;Target=comp136797_c0_seq1 620 1 .;CDS_Target=comp136797_c0_seq1 559 395 .;locus=RLOC_00000415
ChrX	stalkie_big_nohaplotig	exon	7684123	7684742	100	+	.	Parent=comp136797_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7684517	7684681	.	+	0	Parent=comp136797_c0_seq1.mrna1
ChrX	gffcl	locus	7687291	7688385	.	-	.	ID=RLOC_00000416;geneIDs=comp139575_c1_seq1.path1;transcripts=comp139575_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7687291	7688385	.	-	.	ID=comp139575_c1_seq1.mrna1;geneID=comp139575_c1_seq1.path1;Name=comp139575_c1_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=849;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000416
ChrX	stalkie_big_nohaplotig	exon	7687291	7687580	99	-	.	Parent=comp139575_c1_seq1.mrna1;Target=comp139575_c1_seq1 562 851 +
ChrX	stalkie_big_nohaplotig	exon	7687636	7687748	100	-	.	Parent=comp139575_c1_seq1.mrna1;Target=comp139575_c1_seq1 449 561 +
ChrX	stalkie_big_nohaplotig	exon	7687813	7688041	100	-	.	Parent=comp139575_c1_seq1.mrna1;Target=comp139575_c1_seq1 220 448 +
ChrX	stalkie_big_nohaplotig	exon	7688114	7688216	100	-	.	Parent=comp139575_c1_seq1.mrna1;Target=comp139575_c1_seq1 117 219 +
ChrX	stalkie_big_nohaplotig	exon	7688270	7688385	100	-	.	Parent=comp139575_c1_seq1.mrna1;Target=comp139575_c1_seq1 1 116 +
ChrX	stalkie_big_nohaplotig	CDS	7687446	7687580	.	-	0	Parent=comp139575_c1_seq1.mrna1;Target=comp139575_c1_seq1 562 696 +
ChrX	stalkie_big_nohaplotig	CDS	7687636	7687748	.	-	2	Parent=comp139575_c1_seq1.mrna1;Target=comp139575_c1_seq1 449 561 +
ChrX	stalkie_big_nohaplotig	CDS	7687813	7688041	.	-	0	Parent=comp139575_c1_seq1.mrna1;Target=comp139575_c1_seq1 220 448 +
ChrX	stalkie_big_nohaplotig	CDS	7688114	7688216	.	-	1	Parent=comp139575_c1_seq1.mrna1;Target=comp139575_c1_seq1 117 219 +
ChrX	stalkie_big_nohaplotig	CDS	7688270	7688277	.	-	0	Parent=comp139575_c1_seq1.mrna1;Target=comp139575_c1_seq1 109 116 +
ChrX	gffcl	locus	7719439	9608602	.	-	.	ID=RLOC_00000417;geneIDs=comp63765_c0_seq1.path1;transcripts=comp63765_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7719439	9608602	.	-	.	ID=comp63765_c0_seq1.mrna1;geneID=comp63765_c0_seq1.path1;Name=comp63765_c0_seq1;Dir=sensecoverage=91.4;identity=99.8;matches=927;mismatches=2;indels=0;unknowns=0;Target=comp63765_c0_seq1 409 654 +;locus=RLOC_00000417
ChrX	stalkie_big_nohaplotig	exon	7719439	7719448	100	-	.	Parent=comp63765_c0_seq1.mrna1;Target=comp63765_c0_seq1 944 953 +
ChrX	stalkie_big_nohaplotig	exon	7734133	7734134	100	-	.	Parent=comp63765_c0_seq1.mrna1;Target=comp63765_c0_seq1 942 943 +
ChrX	stalkie_big_nohaplotig	exon	9607620	9608330	99	-	.	Parent=comp63765_c0_seq1.mrna1;Target=comp63765_c0_seq1 231 941 +
ChrX	stalkie_big_nohaplotig	exon	9608397	9608602	99	-	.	Parent=comp63765_c0_seq1.mrna1;Target=comp63765_c0_seq1 25 230 +
ChrX	stalkie_big_nohaplotig	CDS	9607907	9608152	.	-	0	Parent=comp63765_c0_seq1.mrna1
ChrX	gffcl	locus	7722194	7723769	.	-	.	ID=RLOC_00000418;geneIDs=comp151585_c0_seq1.path1;transcripts=comp151585_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7722194	7723769	.	-	.	ID=comp151585_c0_seq1.mrna1;geneID=comp151585_c0_seq1.path1;Name=comp151585_c0_seq1;Dir=sensecoverage=94.7;identity=99.8;matches=944;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000418
ChrX	stalkie_big_nohaplotig	exon	7722194	7722613	99	-	.	Parent=comp151585_c0_seq1.mrna1;Target=comp151585_c0_seq1 528 947 +
ChrX	stalkie_big_nohaplotig	exon	7723199	7723263	100	-	.	Parent=comp151585_c0_seq1.mrna1;Target=comp151585_c0_seq1 463 527 +
ChrX	stalkie_big_nohaplotig	exon	7723309	7723769	99	-	.	Parent=comp151585_c0_seq1.mrna1;Target=comp151585_c0_seq1 2 462 +
ChrX	stalkie_big_nohaplotig	CDS	7722477	7722613	.	-	2	Parent=comp151585_c0_seq1.mrna1;Target=comp151585_c0_seq1 528 664 +
ChrX	stalkie_big_nohaplotig	CDS	7723199	7723263	.	-	1	Parent=comp151585_c0_seq1.mrna1;Target=comp151585_c0_seq1 463 527 +
ChrX	stalkie_big_nohaplotig	CDS	7723309	7723403	.	-	0	Parent=comp151585_c0_seq1.mrna1;Target=comp151585_c0_seq1 368 462 +
ChrX	gffcl	locus	7751561	7753066	.	+	.	ID=RLOC_00000419;geneIDs=FBgn0027338.1.path1;transcripts=FBgn0027338.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7751561	7753066	.	+	.	ID=FBgn0027338.1.mrna1;geneID=FBgn0027338.1.path1;Name=FBgn0027338.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1506;mismatches=0;indels=0;unknowns=0;Target=FBgn0027338.1 1506 1 .;locus=RLOC_00000419
ChrX	stalkie_big_nohaplotig	exon	7751561	7753066	100	+	.	Parent=FBgn0027338.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7751561	7753066	.	+	0	Parent=FBgn0027338.1.mrna1
ChrX	gffcl	locus	7760065	7767116	.	+	.	ID=RLOC_00000420;geneIDs=ORF1543.path1;transcripts=ORF1543.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7760065	7767116	.	+	.	ID=ORF1543.mrna1;geneID=ORF1543.path1;Name=ORF1543;Dir=sensecoverage=100.0;identity=99.8;matches=1063;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000420
ChrX	stalkie_big_nohaplotig	exon	7760065	7760099	100	+	.	Parent=ORF1543.mrna1;Target=ORF1543 1 35 +
ChrX	stalkie_big_nohaplotig	exon	7765836	7765914	100	+	.	Parent=ORF1543.mrna1;Target=ORF1543 36 114 +
ChrX	stalkie_big_nohaplotig	exon	7765975	7766299	99	+	.	Parent=ORF1543.mrna1;Target=ORF1543 115 439 +
ChrX	stalkie_big_nohaplotig	exon	7766367	7766516	100	+	.	Parent=ORF1543.mrna1;Target=ORF1543 440 589 +
ChrX	stalkie_big_nohaplotig	exon	7766579	7766728	100	+	.	Parent=ORF1543.mrna1;Target=ORF1543 590 739 +
ChrX	stalkie_big_nohaplotig	exon	7766791	7767116	100	+	.	Parent=ORF1543.mrna1;Target=ORF1543 740 1065 +
ChrX	stalkie_big_nohaplotig	CDS	7760065	7760099	.	+	0	Parent=ORF1543.mrna1;Target=ORF1543 1 35 +
ChrX	stalkie_big_nohaplotig	CDS	7765836	7765914	.	+	1	Parent=ORF1543.mrna1;Target=ORF1543 36 114 +
ChrX	stalkie_big_nohaplotig	CDS	7765975	7766299	.	+	0	Parent=ORF1543.mrna1;Target=ORF1543 115 439 +
ChrX	stalkie_big_nohaplotig	CDS	7766367	7766516	.	+	2	Parent=ORF1543.mrna1;Target=ORF1543 440 589 +
ChrX	stalkie_big_nohaplotig	CDS	7766579	7766728	.	+	2	Parent=ORF1543.mrna1;Target=ORF1543 590 739 +
ChrX	stalkie_big_nohaplotig	CDS	7766791	7767116	.	+	2	Parent=ORF1543.mrna1;Target=ORF1543 740 1065 +
ChrX	gffcl	locus	7784550	7785256	.	-	.	ID=RLOC_00000421;geneIDs=comp134969_c0_seq1.path1;transcripts=comp134969_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7784550	7785256	.	-	.	ID=comp134969_c0_seq1.mrna1;geneID=comp134969_c0_seq1.path1;Name=comp134969_c0_seq1;Dir=antisensecoverage=98.9;identity=99.4;matches=645;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000421
ChrX	stalkie_big_nohaplotig	exon	7784550	7784945	100	-	.	Parent=comp134969_c0_seq1.mrna1;Target=comp134969_c0_seq1 7 402 -
ChrX	stalkie_big_nohaplotig	exon	7785004	7785256	98	-	.	Parent=comp134969_c0_seq1.mrna1;Target=comp134969_c0_seq1 403 655 -
ChrX	stalkie_big_nohaplotig	CDS	7784669	7784945	.	-	1	Parent=comp134969_c0_seq1.mrna1;Target=comp134969_c0_seq1 126 402 .
ChrX	stalkie_big_nohaplotig	CDS	7785004	7785095	.	-	0	Parent=comp134969_c0_seq1.mrna1;Target=comp134969_c0_seq1 403 494 .
ChrX	gffcl	locus	7791129	7796086	.	-	.	ID=RLOC_00000422;geneIDs=FBgn0040346.2.path1;transcripts=FBgn0040346.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7791129	7796086	.	-	.	ID=FBgn0040346.2.mrna1;geneID=FBgn0040346.2.path1;Name=FBgn0040346.2;Dir=sensecoverage=100.0;identity=99.6;matches=2307;mismatches=9;indels=0;unknowns=0;locus=RLOC_00000422
ChrX	stalkie_big_nohaplotig	exon	7791129	7792399	99	-	.	Parent=FBgn0040346.2.mrna1;Target=FBgn0040346.2 1046 2316 +
ChrX	stalkie_big_nohaplotig	exon	7793532	7793607	100	-	.	Parent=FBgn0040346.2.mrna1;Target=FBgn0040346.2 970 1045 +
ChrX	stalkie_big_nohaplotig	exon	7793680	7793803	100	-	.	Parent=FBgn0040346.2.mrna1;Target=FBgn0040346.2 846 969 +
ChrX	stalkie_big_nohaplotig	exon	7795177	7795403	100	-	.	Parent=FBgn0040346.2.mrna1;Target=FBgn0040346.2 619 845 +
ChrX	stalkie_big_nohaplotig	exon	7795469	7796086	99	-	.	Parent=FBgn0040346.2.mrna1;Target=FBgn0040346.2 1 618 +
ChrX	stalkie_big_nohaplotig	CDS	7791129	7792399	.	-	2	Parent=FBgn0040346.2.mrna1;Target=FBgn0040346.2 1046 2316 +
ChrX	stalkie_big_nohaplotig	CDS	7793532	7793607	.	-	0	Parent=FBgn0040346.2.mrna1;Target=FBgn0040346.2 970 1045 +
ChrX	stalkie_big_nohaplotig	CDS	7793680	7793803	.	-	1	Parent=FBgn0040346.2.mrna1;Target=FBgn0040346.2 846 969 +
ChrX	stalkie_big_nohaplotig	CDS	7795177	7795403	.	-	0	Parent=FBgn0040346.2.mrna1;Target=FBgn0040346.2 619 845 +
ChrX	stalkie_big_nohaplotig	CDS	7795469	7796086	.	-	0	Parent=FBgn0040346.2.mrna1;Target=FBgn0040346.2 1 618 +
ChrX	gffcl	locus	7801763	7804072	.	-	.	ID=RLOC_00000423;geneIDs=FBgn0028490.1.path1;transcripts=FBgn0028490.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7801763	7804072	.	-	.	ID=FBgn0028490.1.mrna1;geneID=FBgn0028490.1.path1;Name=FBgn0028490.1;Dir=sensecoverage=99.5;identity=99.7;matches=2235;mismatches=7;indels=0;unknowns=0;locus=RLOC_00000423
ChrX	stalkie_big_nohaplotig	exon	7801763	7802820	99	-	.	Parent=FBgn0028490.1.mrna1;Target=FBgn0028490.1 1196 2253 +
ChrX	stalkie_big_nohaplotig	exon	7802889	7804072	99	-	.	Parent=FBgn0028490.1.mrna1;Target=FBgn0028490.1 12 1195 +
ChrX	stalkie_big_nohaplotig	CDS	7801763	7802820	.	-	2	Parent=FBgn0028490.1.mrna1;Target=FBgn0028490.1 1196 2253 +
ChrX	stalkie_big_nohaplotig	CDS	7802889	7804071	.	-	0	Parent=FBgn0028490.1.mrna1;Target=FBgn0028490.1 13 1195 +
ChrX	gffcl	locus	7828442	7830116	.	-	.	ID=RLOC_00000424;geneIDs=ORF1724.path1;transcripts=ORF1724.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7828442	7830116	.	-	.	ID=ORF1724.mrna1;geneID=ORF1724.path1;Name=ORF1724;Dir=sensecoverage=100.0;identity=99.9;matches=1010;mismatches=0;indels=1;unknowns=0;Target=ORF1724 3 107 +;locus=RLOC_00000424
ChrX	stalkie_big_nohaplotig	exon	7828442	7829208	100	-	.	Parent=ORF1724.mrna1;Target=ORF1724 245 1011 +
ChrX	stalkie_big_nohaplotig	exon	7829874	7830116	99	-	.	Parent=ORF1724.mrna1;Target=ORF1724 1 244 +
ChrX	stalkie_big_nohaplotig	CDS	7830011	7830114	.	-	0	Parent=ORF1724.mrna1
ChrX	gffcl	locus	7845146	7846665	.	-	.	ID=RLOC_00000425;geneIDs=comp137090_c0_seq1.path1;transcripts=comp137090_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7845146	7846665	.	-	.	ID=comp137090_c0_seq1.mrna1;geneID=comp137090_c0_seq1.path1;Name=comp137090_c0_seq1;Dir=sensecoverage=99.1;identity=100.0;matches=1266;mismatches=0;indels=0;unknowns=0;Target=comp137090_c0_seq1 3 125 +;locus=RLOC_00000425
ChrX	stalkie_big_nohaplotig	exon	7845146	7845742	100	-	.	Parent=comp137090_c0_seq1.mrna1;Target=comp137090_c0_seq1 670 1266 +
ChrX	stalkie_big_nohaplotig	exon	7845802	7845937	100	-	.	Parent=comp137090_c0_seq1.mrna1;Target=comp137090_c0_seq1 534 669 +
ChrX	stalkie_big_nohaplotig	exon	7846076	7846395	100	-	.	Parent=comp137090_c0_seq1.mrna1;Target=comp137090_c0_seq1 214 533 +
ChrX	stalkie_big_nohaplotig	exon	7846453	7846665	100	-	.	Parent=comp137090_c0_seq1.mrna1;Target=comp137090_c0_seq1 1 213 +
ChrX	stalkie_big_nohaplotig	CDS	7846541	7846663	.	-	0	Parent=comp137090_c0_seq1.mrna1
ChrX	gffcl	locus	7851597	7857129	.	+	.	ID=RLOC_00000426;geneIDs=comp143331_c0_seq1.path1;transcripts=comp143331_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7851597	7857129	.	+	.	ID=comp143331_c0_seq1.mrna1;geneID=comp143331_c0_seq1.path1;Name=comp143331_c0_seq1;Dir=antisensecoverage=97.0;identity=98.6;matches=763;mismatches=11;indels=0;unknowns=0;Target=comp143331_c0_seq1 508 720 .;locus=RLOC_00000426
ChrX	stalkie_big_nohaplotig	exon	7851597	7851890	97	+	.	Parent=comp143331_c0_seq1.mrna1;Target=comp143331_c0_seq1 481 774 -
ChrX	stalkie_big_nohaplotig	exon	7856650	7857129	99	+	.	Parent=comp143331_c0_seq1.mrna1;Target=comp143331_c0_seq1 1 480 -
ChrX	stalkie_big_nohaplotig	CDS	7851651	7851863	.	+	0	Parent=comp143331_c0_seq1.mrna1
ChrX	gffcl	locus	7873059	7874206	.	+	.	ID=RLOC_00000427;geneIDs=comp153903_c0_seq1.path1;transcripts=comp153903_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7873059	7874206	.	+	.	ID=comp153903_c0_seq1.mrna1;geneID=comp153903_c0_seq1.path1;Name=comp153903_c0_seq1;Dir=sensecoverage=96.4;identity=99.1;matches=939;mismatches=9;indels=0;unknowns=0;Target=comp153903_c0_seq1 130 405 +;locus=RLOC_00000427
ChrX	stalkie_big_nohaplotig	exon	7873059	7873476	99	+	.	Parent=comp153903_c0_seq1.mrna1;Target=comp153903_c0_seq1 19 436 +
ChrX	stalkie_big_nohaplotig	exon	7873549	7873606	98	+	.	Parent=comp153903_c0_seq1.mrna1;Target=comp153903_c0_seq1 437 494 +
ChrX	stalkie_big_nohaplotig	exon	7873673	7873817	97	+	.	Parent=comp153903_c0_seq1.mrna1;Target=comp153903_c0_seq1 495 639 +
ChrX	stalkie_big_nohaplotig	exon	7873880	7874206	99	+	.	Parent=comp153903_c0_seq1.mrna1;Target=comp153903_c0_seq1 640 966 +
ChrX	stalkie_big_nohaplotig	CDS	7873170	7873445	.	+	0	Parent=comp153903_c0_seq1.mrna1
ChrX	gffcl	locus	7901773	7903101	.	-	.	ID=RLOC_00000428;geneIDs=comp150645_c1_seq1.path2;transcripts=comp150645_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	7901773	7903101	.	-	.	ID=comp150645_c1_seq1.mrna2;geneID=comp150645_c1_seq1.path2;Name=comp150645_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1327;mismatches=2;indels=0;unknowns=0;Target=comp150645_c1_seq1 1329 1 .;CDS_Target=comp150645_c1_seq1 182 3 .;locus=RLOC_00000428
ChrX	stalkie_big_nohaplotig	exon	7901773	7903101	99	-	.	Parent=comp150645_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	7902920	7903099	.	-	0	Parent=comp150645_c1_seq1.mrna2
ChrX	gffcl	locus	7926124	7926487	.	+	.	ID=RLOC_00000430;geneIDs=FBgn0011586.5.path2;transcripts=FBgn0011586.5.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	7926124	7926487	.	+	.	ID=FBgn0011586.5.mrna2;geneID=FBgn0011586.5.path2;Name=FBgn0011586.5;Dir=indeterminatecoverage=96.3;identity=97.8;matches=356;mismatches=8;indels=0;unknowns=0;Target=FBgn0011586.5 378 15 .;CDS_Target=FBgn0011586.5 378 16 .;locus=RLOC_00000430
ChrX	stalkie_big_nohaplotig	exon	7926124	7926487	97	+	.	Parent=FBgn0011586.5.mrna2
ChrX	stalkie_big_nohaplotig	CDS	7926125	7926487	.	+	0	Parent=FBgn0011586.5.mrna2
ChrX	gffcl	locus	7944101	7944576	.	+	.	ID=RLOC_00000431;geneIDs=comp70807_c0_seq1.path1;transcripts=comp70807_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7944101	7944576	.	+	.	ID=comp70807_c0_seq1.mrna1;geneID=comp70807_c0_seq1.path1;Name=comp70807_c0_seq1;Dir=indeterminatecoverage=91.5;identity=99.2;matches=472;mismatches=4;indels=0;unknowns=0;Target=comp70807_c0_seq1 478 3 .;CDS_Target=comp70807_c0_seq1 453 115 .;locus=RLOC_00000431
ChrX	stalkie_big_nohaplotig	exon	7944101	7944576	99	+	.	Parent=comp70807_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7944213	7944551	.	+	0	Parent=comp70807_c0_seq1.mrna1
ChrX	gffcl	locus	7956750	7960972	.	+	.	ID=RLOC_00000432;geneIDs=comp142873_c0_seq1.path1;transcripts=comp142873_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7956750	7960972	.	+	.	ID=comp142873_c0_seq1.mrna1;geneID=comp142873_c0_seq1.path1;Name=comp142873_c0_seq1;Dir=sensecoverage=97.0;identity=99.3;matches=575;mismatches=4;indels=0;unknowns=0;Target=comp142873_c0_seq1 184 522 +;locus=RLOC_00000432
ChrX	stalkie_big_nohaplotig	exon	7956750	7956869	99	+	.	Parent=comp142873_c0_seq1.mrna1;Target=comp142873_c0_seq1 18 137 +
ChrX	stalkie_big_nohaplotig	exon	7960514	7960972	99	+	.	Parent=comp142873_c0_seq1.mrna1;Target=comp142873_c0_seq1 138 596 +
ChrX	stalkie_big_nohaplotig	CDS	7960560	7960898	.	+	0	Parent=comp142873_c0_seq1.mrna1
ChrX	gffcl	locus	7994432	7994920	.	-	.	ID=RLOC_00000433;geneIDs=FBgn0000253.27.path1;transcripts=FBgn0000253.27.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	7994432	7994920	.	-	.	ID=FBgn0000253.27.mrna1;geneID=FBgn0000253.27.path1;Name=FBgn0000253.27;Dir=indeterminatecoverage=100.0;identity=100.0;matches=489;mismatches=0;indels=0;unknowns=0;Target=FBgn0000253.27 489 1 .;locus=RLOC_00000433
ChrX	stalkie_big_nohaplotig	exon	7994432	7994920	100	-	.	Parent=FBgn0000253.27.mrna1
ChrX	stalkie_big_nohaplotig	CDS	7994432	7994920	.	-	0	Parent=FBgn0000253.27.mrna1
ChrX	gffcl	locus	8034531	8034719	.	-	.	ID=RLOC_00000434;geneIDs=Dp_FBgn0078188.path1;transcripts=Dp_FBgn0078188.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8034531	8034719	.	-	.	ID=Dp_FBgn0078188.mrna1;geneID=Dp_FBgn0078188.path1;Name=Dp_FBgn0078188;Dir=indeterminatecoverage=100.0;identity=100.0;matches=189;mismatches=0;indels=0;unknowns=0;Target=Dp_FBgn0078188 189 1 .;locus=RLOC_00000434
ChrX	stalkie_big_nohaplotig	exon	8034531	8034719	100	-	.	Parent=Dp_FBgn0078188.mrna1
ChrX	stalkie_big_nohaplotig	CDS	8034531	8034719	.	-	0	Parent=Dp_FBgn0078188.mrna1
ChrX	gffcl	locus	8102061	8104146	.	+	.	ID=RLOC_00000435;geneIDs=comp117452_c0_seq1.path1;transcripts=comp117452_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8102061	8104146	.	+	.	ID=comp117452_c0_seq1.mrna1;geneID=comp117452_c0_seq1.path1;Name=comp117452_c0_seq1;Dir=sensecoverage=99.7;identity=99.2;matches=1169;mismatches=9;indels=0;unknowns=0;locus=RLOC_00000435
ChrX	stalkie_big_nohaplotig	exon	8102061	8102252	99	+	.	Parent=comp117452_c0_seq1.mrna1;Target=comp117452_c0_seq1 2 193 +
ChrX	stalkie_big_nohaplotig	exon	8102317	8102490	100	+	.	Parent=comp117452_c0_seq1.mrna1;Target=comp117452_c0_seq1 194 367 +
ChrX	stalkie_big_nohaplotig	exon	8103335	8104146	99	+	.	Parent=comp117452_c0_seq1.mrna1;Target=comp117452_c0_seq1 368 1179 +
ChrX	stalkie_big_nohaplotig	CDS	8102202	8102252	.	+	0	Parent=comp117452_c0_seq1.mrna1;Target=comp117452_c0_seq1 143 193 +
ChrX	stalkie_big_nohaplotig	CDS	8102317	8102490	.	+	0	Parent=comp117452_c0_seq1.mrna1;Target=comp117452_c0_seq1 194 367 +
ChrX	stalkie_big_nohaplotig	CDS	8103335	8103532	.	+	0	Parent=comp117452_c0_seq1.mrna1;Target=comp117452_c0_seq1 368 565 +
ChrX	gffcl	locus	8141825	8142485	.	+	.	ID=RLOC_00000436;geneIDs=comp148251_c1_seq1.path1;transcripts=comp148251_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8141825	8142485	.	+	.	ID=comp148251_c1_seq1.mrna1;geneID=comp148251_c1_seq1.path1;Name=comp148251_c1_seq1;Dir=indeterminatecoverage=99.0;identity=99.4;matches=657;mismatches=4;indels=0;unknowns=0;Target=comp148251_c1_seq1 668 8 .;CDS_Target=comp148251_c1_seq1 560 114 .;locus=RLOC_00000436
ChrX	stalkie_big_nohaplotig	exon	8141825	8142485	99	+	.	Parent=comp148251_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	8141931	8142377	.	+	0	Parent=comp148251_c1_seq1.mrna1
ChrX	gffcl	locus	8192699	8193457	.	-	.	ID=RLOC_00000437;geneIDs=comp145911_c1_seq1.path1;transcripts=comp145911_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8192699	8193457	.	-	.	ID=comp145911_c1_seq1.mrna1;geneID=comp145911_c1_seq1.path1;Name=comp145911_c1_seq1;Dir=indeterminatecoverage=93.9;identity=99.6;matches=756;mismatches=0;indels=3;unknowns=0;Target=comp145911_c1_seq1 756 1 .;CDS_Target=comp145911_c1_seq1 259 2 .;locus=RLOC_00000437
ChrX	stalkie_big_nohaplotig	exon	8192699	8193457	99	-	.	Parent=comp145911_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	8193199	8193456	.	-	0	Parent=comp145911_c1_seq1.mrna1
ChrX	gffcl	locus	8202314	9726841	.	+	.	ID=RLOC_00000438;geneIDs=comp163085_c0_seq1.path1;transcripts=comp163085_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8202314	9726841	.	+	.	ID=comp163085_c0_seq1.mrna1;geneID=comp163085_c0_seq1.path1;Name=comp163085_c0_seq1;Dir=indeterminatecoverage=77.3;identity=99.9;matches=1665;mismatches=1;indels=1;unknowns=0;Target=comp163085_c0_seq1 210 34 .;locus=RLOC_00000438
ChrX	stalkie_big_nohaplotig	exon	8202314	8203929	99	+	.	Parent=comp163085_c0_seq1.mrna1;Target=comp163085_c0_seq1 1617 1 .
ChrX	stalkie_big_nohaplotig	exon	9703878	9703879	100	+	.	Parent=comp163085_c0_seq1.mrna1;Target=comp163085_c0_seq1 1619 1618 .
ChrX	stalkie_big_nohaplotig	exon	9711790	9711794	100	+	.	Parent=comp163085_c0_seq1.mrna1;Target=comp163085_c0_seq1 1624 1620 .
ChrX	stalkie_big_nohaplotig	exon	9719569	9719576	100	+	.	Parent=comp163085_c0_seq1.mrna1;Target=comp163085_c0_seq1 1632 1625 .
ChrX	stalkie_big_nohaplotig	exon	9722201	9722215	100	+	.	Parent=comp163085_c0_seq1.mrna1;Target=comp163085_c0_seq1 1647 1633 .
ChrX	stalkie_big_nohaplotig	exon	9724072	9724084	92	+	.	Parent=comp163085_c0_seq1.mrna1;Target=comp163085_c0_seq1 1660 1648 .
ChrX	stalkie_big_nohaplotig	exon	9726835	9726841	100	+	.	Parent=comp163085_c0_seq1.mrna1;Target=comp163085_c0_seq1 1669 1663 .
ChrX	stalkie_big_nohaplotig	CDS	8202347	8202523	.	+	0	Parent=comp163085_c0_seq1.mrna1
ChrX	gffcl	locus	8204135	8204640	.	-	.	ID=RLOC_00000439;geneIDs=comp119267_c0_seq1.path1;transcripts=comp119267_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8204135	8204640	.	-	.	ID=comp119267_c0_seq1.mrna1;geneID=comp119267_c0_seq1.path1;Name=comp119267_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=504;mismatches=2;indels=0;unknowns=0;Target=comp119267_c0_seq1 506 1 .;CDS_Target=comp119267_c0_seq1 66 1 .;locus=RLOC_00000439
ChrX	stalkie_big_nohaplotig	exon	8204135	8204640	99	-	.	Parent=comp119267_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	8204575	8204640	.	-	0	Parent=comp119267_c0_seq1.mrna1
ChrX	gffcl	locus	8205859	8206042	.	+	.	ID=RLOC_00000440;geneIDs=comp89744_c0_seq1.path1;transcripts=comp89744_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8205859	8206042	.	+	.	ID=comp89744_c0_seq1.mrna1;geneID=comp89744_c0_seq1.path1;Name=comp89744_c0_seq1;Dir=indeterminatecoverage=75.1;identity=99.5;matches=183;mismatches=1;indels=0;unknowns=0;Target=comp89744_c0_seq1 184 1 .;CDS_Target=comp89744_c0_seq1 58 2 .;locus=RLOC_00000440
ChrX	stalkie_big_nohaplotig	exon	8205859	8206042	99	+	.	Parent=comp89744_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	8205860	8205916	.	+	0	Parent=comp89744_c0_seq1.mrna1
ChrX	gffcl	locus	8209407	8211481	.	-	.	ID=RLOC_00000441;geneIDs=comp149067_c0_seq1.path1;transcripts=comp149067_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8209407	8211481	.	-	.	ID=comp149067_c0_seq1.mrna1;geneID=comp149067_c0_seq1.path1;Name=comp149067_c0_seq1;Dir=antisensecoverage=99.9;identity=99.1;matches=1817;mismatches=1;indels=15;unknowns=0;locus=RLOC_00000441
ChrX	stalkie_big_nohaplotig	exon	8209407	8209924	100	-	.	Parent=comp149067_c0_seq1.mrna1;Target=comp149067_c0_seq1 2 519 -
ChrX	stalkie_big_nohaplotig	exon	8210073	8210475	100	-	.	Parent=comp149067_c0_seq1.mrna1;Target=comp149067_c0_seq1 520 922 -
ChrX	stalkie_big_nohaplotig	exon	8210530	8211312	97	-	.	Parent=comp149067_c0_seq1.mrna1;Target=comp149067_c0_seq1 923 1720 -
ChrX	stalkie_big_nohaplotig	exon	8211368	8211481	100	-	.	Parent=comp149067_c0_seq1.mrna1;Target=comp149067_c0_seq1 1721 1834 -
ChrX	stalkie_big_nohaplotig	CDS	8209916	8209924	.	-	0	Parent=comp149067_c0_seq1.mrna1;Target=comp149067_c0_seq1 511 519 .
ChrX	stalkie_big_nohaplotig	CDS	8210073	8210429	.	-	0	Parent=comp149067_c0_seq1.mrna1;Target=comp149067_c0_seq1 520 876 .
ChrX	gffcl	locus	8213259	8213971	.	+	.	ID=RLOC_00000442;geneIDs=FBgn0261394.1.path1;transcripts=FBgn0261394.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8213259	8213971	.	+	.	ID=FBgn0261394.1.mrna1;geneID=FBgn0261394.1.path1;Name=FBgn0261394.1;Dir=sensecoverage=99.2;identity=98.8;matches=650;mismatches=8;indels=0;unknowns=0;locus=RLOC_00000442
ChrX	stalkie_big_nohaplotig	exon	8213259	8213384	97	+	.	Parent=FBgn0261394.1.mrna1;Target=FBgn0261394.1 6 131 +
ChrX	stalkie_big_nohaplotig	exon	8213440	8213971	99	+	.	Parent=FBgn0261394.1.mrna1;Target=FBgn0261394.1 132 663 +
ChrX	stalkie_big_nohaplotig	CDS	8213260	8213384	.	+	0	Parent=FBgn0261394.1.mrna1;Target=FBgn0261394.1 7 131 +
ChrX	stalkie_big_nohaplotig	CDS	8213440	8213971	.	+	1	Parent=FBgn0261394.1.mrna1;Target=FBgn0261394.1 132 663 +
ChrX	gffcl	locus	8228187	8229008	.	-	.	ID=RLOC_00000443;geneIDs=comp135650_c0_seq1.path1;transcripts=comp135650_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8228187	8229008	.	-	.	ID=comp135650_c0_seq1.mrna1;geneID=comp135650_c0_seq1.path1;Name=comp135650_c0_seq1;Dir=antisensecoverage=96.8;identity=100.0;matches=751;mismatches=0;indels=0;unknowns=0;Target=comp135650_c0_seq1 249 599 .;locus=RLOC_00000443
ChrX	stalkie_big_nohaplotig	exon	8228187	8228405	100	-	.	Parent=comp135650_c0_seq1.mrna1;Target=comp135650_c0_seq1 26 244 -
ChrX	stalkie_big_nohaplotig	exon	8228477	8229008	100	-	.	Parent=comp135650_c0_seq1.mrna1;Target=comp135650_c0_seq1 245 776 -
ChrX	stalkie_big_nohaplotig	CDS	8228481	8228831	.	-	0	Parent=comp135650_c0_seq1.mrna1
ChrX	gffcl	locus	8238001	8247584	.	-	.	ID=RLOC_00000444;geneIDs=comp162111_c0_seq1.path1;transcripts=comp162111_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8238001	8247584	.	-	.	ID=comp162111_c0_seq1.mrna1;geneID=comp162111_c0_seq1.path1;Name=comp162111_c0_seq1;Dir=sensecoverage=99.7;identity=99.8;matches=1767;mismatches=3;indels=1;unknowns=71;Target=comp162111_c0_seq1 864 1076 +;locus=RLOC_00000444
ChrX	stalkie_big_nohaplotig	exon	8238001	8238100	98	-	.	Parent=comp162111_c0_seq1.mrna1;Target=comp162111_c0_seq1 1832 1932 +
ChrX	stalkie_big_nohaplotig	exon	8238160	8238206	100	-	.	Parent=comp162111_c0_seq1.mrna1;Target=comp162111_c0_seq1 1785 1831 +
ChrX	stalkie_big_nohaplotig	exon	8238259	8238390	100	-	.	Parent=comp162111_c0_seq1.mrna1;Target=comp162111_c0_seq1 1653 1784 +
ChrX	stalkie_big_nohaplotig	exon	8238448	8238553	100	-	.	Parent=comp162111_c0_seq1.mrna1;Target=comp162111_c0_seq1 1547 1652 +
ChrX	stalkie_big_nohaplotig	exon	8238817	8238910	97	-	.	Parent=comp162111_c0_seq1.mrna1;Target=comp162111_c0_seq1 1453 1546 +
ChrX	stalkie_big_nohaplotig	exon	8238992	8239182	100	-	.	Parent=comp162111_c0_seq1.mrna1;Target=comp162111_c0_seq1 1262 1452 +
ChrX	stalkie_big_nohaplotig	exon	8239252	8239801	100	-	.	Parent=comp162111_c0_seq1.mrna1;Target=comp162111_c0_seq1 712 1261 +
ChrX	stalkie_big_nohaplotig	exon	8240160	8240252	100	-	.	Parent=comp162111_c0_seq1.mrna1;Target=comp162111_c0_seq1 619 711 +
ChrX	stalkie_big_nohaplotig	exon	8243414	8243421	100	-	.	Parent=comp162111_c0_seq1.mrna1;Target=comp162111_c0_seq1 526 533 +
ChrX	stalkie_big_nohaplotig	exon	8244528	8244623	100	-	.	Parent=comp162111_c0_seq1.mrna1;Target=comp162111_c0_seq1 430 525 +
ChrX	stalkie_big_nohaplotig	exon	8244995	8245041	100	-	.	Parent=comp162111_c0_seq1.mrna1;Target=comp162111_c0_seq1 383 429 +
ChrX	stalkie_big_nohaplotig	exon	8245181	8245229	100	-	.	Parent=comp162111_c0_seq1.mrna1;Target=comp162111_c0_seq1 334 382 +
ChrX	stalkie_big_nohaplotig	exon	8245741	8245805	100	-	.	Parent=comp162111_c0_seq1.mrna1;Target=comp162111_c0_seq1 269 333 +
ChrX	stalkie_big_nohaplotig	exon	8246792	8246859	100	-	.	Parent=comp162111_c0_seq1.mrna1;Target=comp162111_c0_seq1 201 268 +
ChrX	stalkie_big_nohaplotig	exon	8246946	8247009	100	-	.	Parent=comp162111_c0_seq1.mrna1;Target=comp162111_c0_seq1 137 200 +
ChrX	stalkie_big_nohaplotig	exon	8247454	8247584	100	-	.	Parent=comp162111_c0_seq1.mrna1;Target=comp162111_c0_seq1 6 136 +
ChrX	stalkie_big_nohaplotig	CDS	8239437	8239649	.	-	0	Parent=comp162111_c0_seq1.mrna1
ChrX	gffcl	locus	8282599	8283191	.	-	.	ID=RLOC_00000445;geneIDs=comp136989_c0_seq1.path1;transcripts=comp136989_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8282599	8283191	.	-	.	ID=comp136989_c0_seq1.mrna1;geneID=comp136989_c0_seq1.path1;Name=comp136989_c0_seq1;Dir=sensecoverage=95.4;identity=99.4;matches=477;mismatches=3;indels=0;unknowns=0;Target=comp136989_c0_seq1 199 480 +;locus=RLOC_00000445
ChrX	stalkie_big_nohaplotig	exon	8282599	8282914	99	-	.	Parent=comp136989_c0_seq1.mrna1;Target=comp136989_c0_seq1 165 480 +
ChrX	stalkie_big_nohaplotig	exon	8282973	8283096	100	-	.	Parent=comp136989_c0_seq1.mrna1;Target=comp136989_c0_seq1 41 164 +
ChrX	stalkie_big_nohaplotig	exon	8283152	8283191	100	-	.	Parent=comp136989_c0_seq1.mrna1;Target=comp136989_c0_seq1 1 40 +
ChrX	stalkie_big_nohaplotig	CDS	8282599	8282880	.	-	0	Parent=comp136989_c0_seq1.mrna1
ChrX	gffcl	locus	8287565	8289201	.	+	.	ID=RLOC_00000446;geneIDs=comp116654_c0_seq1.path1;transcripts=comp116654_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8287565	8289201	.	+	.	ID=comp116654_c0_seq1.mrna1;geneID=comp116654_c0_seq1.path1;Name=comp116654_c0_seq1;Dir=sensecoverage=98.5;identity=97.6;matches=724;mismatches=18;indels=0;unknowns=0;Target=comp116654_c0_seq1 266 349 +;locus=RLOC_00000446
ChrX	stalkie_big_nohaplotig	exon	8287565	8287764	99	+	.	Parent=comp116654_c0_seq1.mrna1;Target=comp116654_c0_seq1 1 200 +
ChrX	stalkie_big_nohaplotig	exon	8288256	8288312	91	+	.	Parent=comp116654_c0_seq1.mrna1;Target=comp116654_c0_seq1 201 257 +
ChrX	stalkie_big_nohaplotig	exon	8288658	8289010	98	+	.	Parent=comp116654_c0_seq1.mrna1;Target=comp116654_c0_seq1 258 610 +
ChrX	stalkie_big_nohaplotig	exon	8289070	8289201	96	+	.	Parent=comp116654_c0_seq1.mrna1;Target=comp116654_c0_seq1 611 742 +
ChrX	stalkie_big_nohaplotig	CDS	8288666	8288749	.	+	0	Parent=comp116654_c0_seq1.mrna1
ChrX	gffcl	locus	8350151	8351147	.	-	.	ID=RLOC_00000448;geneIDs=comp153481_c0_seq1.path1;transcripts=comp153481_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8350151	8351147	.	-	.	ID=comp153481_c0_seq1.mrna1;geneID=comp153481_c0_seq1.path1;Name=comp153481_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=935;mismatches=0;indels=0;unknowns=0;Target=comp153481_c0_seq1 549 650 +;locus=RLOC_00000448
ChrX	stalkie_big_nohaplotig	exon	8350151	8351072	100	-	.	Parent=comp153481_c0_seq1.mrna1;Target=comp153481_c0_seq1 14 935 +
ChrX	stalkie_big_nohaplotig	exon	8351135	8351147	100	-	.	Parent=comp153481_c0_seq1.mrna1;Target=comp153481_c0_seq1 1 13 +
ChrX	stalkie_big_nohaplotig	CDS	8350436	8350537	.	-	0	Parent=comp153481_c0_seq1.mrna1
ChrX	gffcl	locus	8392440	8394275	.	-	.	ID=RLOC_00000449;geneIDs=FBgn0037980.2.path2;transcripts=FBgn0037980.2.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	8392440	8394275	.	-	.	ID=FBgn0037980.2.mrna2;geneID=FBgn0037980.2.path2;Name=FBgn0037980.2;Dir=sensecoverage=100.0;identity=98.2;matches=1196;mismatches=22;indels=0;unknowns=0;locus=RLOC_00000449
ChrX	stalkie_big_nohaplotig	exon	8392440	8392541	96	-	.	Parent=FBgn0037980.2.mrna2;Target=FBgn0037980.2 1117 1218 +
ChrX	stalkie_big_nohaplotig	exon	8392608	8392769	98	-	.	Parent=FBgn0037980.2.mrna2;Target=FBgn0037980.2 955 1116 +
ChrX	stalkie_big_nohaplotig	exon	8393035	8393265	97	-	.	Parent=FBgn0037980.2.mrna2;Target=FBgn0037980.2 724 954 +
ChrX	stalkie_big_nohaplotig	exon	8393334	8393702	97	-	.	Parent=FBgn0037980.2.mrna2;Target=FBgn0037980.2 355 723 +
ChrX	stalkie_big_nohaplotig	exon	8393785	8393940	100	-	.	Parent=FBgn0037980.2.mrna2;Target=FBgn0037980.2 199 354 +
ChrX	stalkie_big_nohaplotig	exon	8394078	8394275	100	-	.	Parent=FBgn0037980.2.mrna2;Target=FBgn0037980.2 1 198 +
ChrX	stalkie_big_nohaplotig	CDS	8392440	8392541	.	-	0	Parent=FBgn0037980.2.mrna2;Target=FBgn0037980.2 1117 1218 +
ChrX	stalkie_big_nohaplotig	CDS	8392608	8392769	.	-	0	Parent=FBgn0037980.2.mrna2;Target=FBgn0037980.2 955 1116 +
ChrX	stalkie_big_nohaplotig	CDS	8393035	8393265	.	-	0	Parent=FBgn0037980.2.mrna2;Target=FBgn0037980.2 724 954 +
ChrX	stalkie_big_nohaplotig	CDS	8393334	8393702	.	-	0	Parent=FBgn0037980.2.mrna2;Target=FBgn0037980.2 355 723 +
ChrX	stalkie_big_nohaplotig	CDS	8393785	8393940	.	-	0	Parent=FBgn0037980.2.mrna2;Target=FBgn0037980.2 199 354 +
ChrX	stalkie_big_nohaplotig	CDS	8394078	8394275	.	-	0	Parent=FBgn0037980.2.mrna2;Target=FBgn0037980.2 1 198 +
ChrX	gffcl	locus	8398371	8399031	.	-	.	ID=RLOC_00000450;geneIDs=comp113735_c0_seq1.path1;transcripts=comp113735_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8398371	8399031	.	-	.	ID=comp113735_c0_seq1.mrna1;geneID=comp113735_c0_seq1.path1;Name=comp113735_c0_seq1;Dir=sensecoverage=99.8;identity=99.8;matches=477;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000450
ChrX	stalkie_big_nohaplotig	exon	8398371	8398496	99	-	.	Parent=comp113735_c0_seq1.mrna1;Target=comp113735_c0_seq1 353 478 +
ChrX	stalkie_big_nohaplotig	exon	8398559	8398805	100	-	.	Parent=comp113735_c0_seq1.mrna1;Target=comp113735_c0_seq1 106 352 +
ChrX	stalkie_big_nohaplotig	exon	8398927	8399031	100	-	.	Parent=comp113735_c0_seq1.mrna1;Target=comp113735_c0_seq1 1 105 +
ChrX	stalkie_big_nohaplotig	CDS	8398446	8398496	.	-	0	Parent=comp113735_c0_seq1.mrna1;Target=comp113735_c0_seq1 353 403 +
ChrX	stalkie_big_nohaplotig	CDS	8398559	8398780	.	-	0	Parent=comp113735_c0_seq1.mrna1;Target=comp113735_c0_seq1 131 352 +
ChrX	gffcl	locus	8421944	8422044	.	+	.	ID=RLOC_00000451;geneIDs=comp157823_c0_seq1.path1;transcripts=comp157823_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8421944	8422044	.	+	.	ID=comp157823_c0_seq1.mrna1;geneID=comp157823_c0_seq1.path1;Name=comp157823_c0_seq1;Dir=indeterminatecoverage=8.9;identity=100.0;matches=101;mismatches=0;indels=0;unknowns=0;Target=comp157823_c0_seq1 101 1 .;locus=RLOC_00000451
ChrX	stalkie_big_nohaplotig	exon	8421944	8422044	100	+	.	Parent=comp157823_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	8421944	8422044	.	+	0	Parent=comp157823_c0_seq1.mrna1
ChrX	gffcl	locus	8433095	8435583	.	+	.	ID=RLOC_00000452;geneIDs=FBgn0052064.1.path1;transcripts=FBgn0052064.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8433095	8435583	.	+	.	ID=FBgn0052064.1.mrna1;geneID=FBgn0052064.1.path1;Name=FBgn0052064.1;Dir=sensecoverage=100.0;identity=99.9;matches=1523;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000452
ChrX	stalkie_big_nohaplotig	exon	8433095	8433220	100	+	.	Parent=FBgn0052064.1.mrna1;Target=FBgn0052064.1 1 126 +
ChrX	stalkie_big_nohaplotig	exon	8433278	8433393	100	+	.	Parent=FBgn0052064.1.mrna1;Target=FBgn0052064.1 127 242 +
ChrX	stalkie_big_nohaplotig	exon	8433449	8433584	100	+	.	Parent=FBgn0052064.1.mrna1;Target=FBgn0052064.1 243 378 +
ChrX	stalkie_big_nohaplotig	exon	8433715	8434220	100	+	.	Parent=FBgn0052064.1.mrna1;Target=FBgn0052064.1 379 884 +
ChrX	stalkie_big_nohaplotig	exon	8434279	8434489	100	+	.	Parent=FBgn0052064.1.mrna1;Target=FBgn0052064.1 885 1095 +
ChrX	stalkie_big_nohaplotig	exon	8434560	8434797	100	+	.	Parent=FBgn0052064.1.mrna1;Target=FBgn0052064.1 1096 1333 +
ChrX	stalkie_big_nohaplotig	exon	8435290	8435366	100	+	.	Parent=FBgn0052064.1.mrna1;Target=FBgn0052064.1 1334 1410 +
ChrX	stalkie_big_nohaplotig	exon	8435470	8435583	99	+	.	Parent=FBgn0052064.1.mrna1;Target=FBgn0052064.1 1411 1524 +
ChrX	stalkie_big_nohaplotig	CDS	8433095	8433220	.	+	0	Parent=FBgn0052064.1.mrna1;Target=FBgn0052064.1 1 126 +
ChrX	stalkie_big_nohaplotig	CDS	8433278	8433393	.	+	0	Parent=FBgn0052064.1.mrna1;Target=FBgn0052064.1 127 242 +
ChrX	stalkie_big_nohaplotig	CDS	8433449	8433584	.	+	1	Parent=FBgn0052064.1.mrna1;Target=FBgn0052064.1 243 378 +
ChrX	stalkie_big_nohaplotig	CDS	8433715	8434220	.	+	0	Parent=FBgn0052064.1.mrna1;Target=FBgn0052064.1 379 884 +
ChrX	stalkie_big_nohaplotig	CDS	8434279	8434489	.	+	1	Parent=FBgn0052064.1.mrna1;Target=FBgn0052064.1 885 1095 +
ChrX	stalkie_big_nohaplotig	CDS	8434560	8434797	.	+	0	Parent=FBgn0052064.1.mrna1;Target=FBgn0052064.1 1096 1333 +
ChrX	stalkie_big_nohaplotig	CDS	8435290	8435366	.	+	2	Parent=FBgn0052064.1.mrna1;Target=FBgn0052064.1 1334 1410 +
ChrX	stalkie_big_nohaplotig	CDS	8435470	8435583	.	+	0	Parent=FBgn0052064.1.mrna1;Target=FBgn0052064.1 1411 1524 +
ChrX	gffcl	locus	8440630	8441293	.	+	.	ID=RLOC_00000453;geneIDs=comp118862_c0_seq1.path1;transcripts=comp118862_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8440630	8441293	.	+	.	ID=comp118862_c0_seq1.mrna1;geneID=comp118862_c0_seq1.path1;Name=comp118862_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=663;mismatches=1;indels=0;unknowns=0;Target=comp118862_c0_seq1 664 1 .;CDS_Target=comp118862_c0_seq1 156 61 .;locus=RLOC_00000453
ChrX	stalkie_big_nohaplotig	exon	8440630	8441293	99	+	.	Parent=comp118862_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	8440690	8440785	.	+	0	Parent=comp118862_c0_seq1.mrna1
ChrX	gffcl	locus	8445600	8447427	.	+	.	ID=RLOC_00000454;geneIDs=FBgn0037980.2.path1;transcripts=FBgn0037980.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8445600	8447427	.	+	.	ID=FBgn0037980.2.mrna1;geneID=FBgn0037980.2.path1;Name=FBgn0037980.2;Dir=sensecoverage=100.0;identity=98.4;matches=1199;mismatches=19;indels=0;unknowns=0;locus=RLOC_00000454
ChrX	stalkie_big_nohaplotig	exon	8445600	8445797	97	+	.	Parent=FBgn0037980.2.mrna1;Target=FBgn0037980.2 1 198 +
ChrX	stalkie_big_nohaplotig	exon	8445932	8446087	97	+	.	Parent=FBgn0037980.2.mrna1;Target=FBgn0037980.2 199 354 +
ChrX	stalkie_big_nohaplotig	exon	8446170	8446538	99	+	.	Parent=FBgn0037980.2.mrna1;Target=FBgn0037980.2 355 723 +
ChrX	stalkie_big_nohaplotig	exon	8446597	8446827	98	+	.	Parent=FBgn0037980.2.mrna1;Target=FBgn0037980.2 724 954 +
ChrX	stalkie_big_nohaplotig	exon	8447093	8447254	97	+	.	Parent=FBgn0037980.2.mrna1;Target=FBgn0037980.2 955 1116 +
ChrX	stalkie_big_nohaplotig	exon	8447326	8447427	98	+	.	Parent=FBgn0037980.2.mrna1;Target=FBgn0037980.2 1117 1218 +
ChrX	stalkie_big_nohaplotig	CDS	8445600	8445797	.	+	0	Parent=FBgn0037980.2.mrna1;Target=FBgn0037980.2 1 198 +
ChrX	stalkie_big_nohaplotig	CDS	8445932	8446087	.	+	0	Parent=FBgn0037980.2.mrna1;Target=FBgn0037980.2 199 354 +
ChrX	stalkie_big_nohaplotig	CDS	8446170	8446538	.	+	0	Parent=FBgn0037980.2.mrna1;Target=FBgn0037980.2 355 723 +
ChrX	stalkie_big_nohaplotig	CDS	8446597	8446827	.	+	0	Parent=FBgn0037980.2.mrna1;Target=FBgn0037980.2 724 954 +
ChrX	stalkie_big_nohaplotig	CDS	8447093	8447254	.	+	0	Parent=FBgn0037980.2.mrna1;Target=FBgn0037980.2 955 1116 +
ChrX	stalkie_big_nohaplotig	CDS	8447326	8447427	.	+	0	Parent=FBgn0037980.2.mrna1;Target=FBgn0037980.2 1117 1218 +
ChrX	gffcl	locus	8450706	8451332	.	+	.	ID=RLOC_00000455;geneIDs=comp149603_c0_seq1.path1;transcripts=comp149603_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8450706	8451332	.	+	.	ID=comp149603_c0_seq1.mrna1;geneID=comp149603_c0_seq1.path1;Name=comp149603_c0_seq1;Dir=antisensecoverage=99.6;identity=98.9;matches=550;mismatches=5;indels=1;unknowns=0;Target=comp149603_c0_seq1 50 322 .;locus=RLOC_00000455
ChrX	stalkie_big_nohaplotig	exon	8450706	8450897	99	+	.	Parent=comp149603_c0_seq1.mrna1;Target=comp149603_c0_seq1 366 558 -
ChrX	stalkie_big_nohaplotig	exon	8450970	8451332	98	+	.	Parent=comp149603_c0_seq1.mrna1;Target=comp149603_c0_seq1 3 365 -
ChrX	stalkie_big_nohaplotig	CDS	8451013	8451285	.	+	0	Parent=comp149603_c0_seq1.mrna1
ChrX	gffcl	locus	8476106	8477971	.	-	.	ID=RLOC_00000456;geneIDs=FBgn0020238.10.path1;transcripts=FBgn0020238.10.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8476106	8477971	.	-	.	ID=FBgn0020238.10.mrna1;geneID=FBgn0020238.10.path1;Name=FBgn0020238.10;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1857;mismatches=9;indels=0;unknowns=0;Target=FBgn0020238.10 1866 1 .;locus=RLOC_00000456
ChrX	stalkie_big_nohaplotig	exon	8476106	8477971	99	-	.	Parent=FBgn0020238.10.mrna1
ChrX	stalkie_big_nohaplotig	CDS	8476106	8477971	.	-	0	Parent=FBgn0020238.10.mrna1
ChrX	gffcl	locus	8481160	8482005	.	-	.	ID=RLOC_00000457;geneIDs=comp149527_c0_seq1.path1;transcripts=comp149527_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8481160	8482005	.	-	.	ID=comp149527_c0_seq1.mrna1;geneID=comp149527_c0_seq1.path1;Name=comp149527_c0_seq1;Dir=antisensecoverage=99.8;identity=99.5;matches=566;mismatches=3;indels=0;unknowns=0;Target=comp149527_c0_seq1 77 346 .;locus=RLOC_00000457
ChrX	stalkie_big_nohaplotig	exon	8481160	8481510	100	-	.	Parent=comp149527_c0_seq1.mrna1;Target=comp149527_c0_seq1 2 352 -
ChrX	stalkie_big_nohaplotig	exon	8481561	8481642	100	-	.	Parent=comp149527_c0_seq1.mrna1;Target=comp149527_c0_seq1 353 434 -
ChrX	stalkie_big_nohaplotig	exon	8481870	8482005	97	-	.	Parent=comp149527_c0_seq1.mrna1;Target=comp149527_c0_seq1 435 570 -
ChrX	stalkie_big_nohaplotig	CDS	8481235	8481504	.	-	0	Parent=comp149527_c0_seq1.mrna1
ChrX	gffcl	locus	8489739	8490816	.	-	.	ID=RLOC_00000458;geneIDs=comp158168_c0_seq1.path1;transcripts=comp158168_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8489739	8490816	.	-	.	ID=comp158168_c0_seq1.mrna1;geneID=comp158168_c0_seq1.path1;Name=comp158168_c0_seq1;Dir=antisensecoverage=74.5;identity=98.8;matches=1015;mismatches=11;indels=1;unknowns=0;Target=comp158168_c0_seq1 310 585 .;locus=RLOC_00000458
ChrX	stalkie_big_nohaplotig	exon	8489739	8490060	99	-	.	Parent=comp158168_c0_seq1.mrna1;Target=comp158168_c0_seq1 269 590 -
ChrX	stalkie_big_nohaplotig	exon	8490112	8490816	98	-	.	Parent=comp158168_c0_seq1.mrna1;Target=comp158168_c0_seq1 591 1294 -
ChrX	stalkie_big_nohaplotig	CDS	8489780	8490055	.	-	0	Parent=comp158168_c0_seq1.mrna1
ChrX	gffcl	locus	8550317	8551041	.	+	.	ID=RLOC_00000459;geneIDs=comp133689_c0_seq1.path1;transcripts=comp133689_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8550317	8551041	.	+	.	ID=comp133689_c0_seq1.mrna1;geneID=comp133689_c0_seq1.path1;Name=comp133689_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.4;matches=721;mismatches=4;indels=0;unknowns=0;Target=comp133689_c0_seq1 728 4 .;CDS_Target=comp133689_c0_seq1 595 5 .;locus=RLOC_00000459
ChrX	stalkie_big_nohaplotig	exon	8550317	8551041	99	+	.	Parent=comp133689_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	8550318	8550908	.	+	0	Parent=comp133689_c0_seq1.mrna1
ChrX	gffcl	locus	8558333	8563414	.	+	.	ID=RLOC_00000460;geneIDs=FBgn0028670.1.path1;transcripts=FBgn0028670.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8558333	8563414	.	+	.	ID=FBgn0028670.1.mrna1;geneID=FBgn0028670.1.path1;Name=FBgn0028670.1;Dir=sensecoverage=100.0;identity=99.8;matches=2491;mismatches=5;indels=0;unknowns=0;locus=RLOC_00000460
ChrX	stalkie_big_nohaplotig	exon	8558333	8558473	100	+	.	Parent=FBgn0028670.1.mrna1;Target=FBgn0028670.1 1 141 +
ChrX	stalkie_big_nohaplotig	exon	8560870	8562753	99	+	.	Parent=FBgn0028670.1.mrna1;Target=FBgn0028670.1 142 2025 +
ChrX	stalkie_big_nohaplotig	exon	8562822	8563029	99	+	.	Parent=FBgn0028670.1.mrna1;Target=FBgn0028670.1 2026 2233 +
ChrX	stalkie_big_nohaplotig	exon	8563088	8563259	100	+	.	Parent=FBgn0028670.1.mrna1;Target=FBgn0028670.1 2234 2405 +
ChrX	stalkie_big_nohaplotig	exon	8563324	8563414	100	+	.	Parent=FBgn0028670.1.mrna1;Target=FBgn0028670.1 2406 2496 +
ChrX	stalkie_big_nohaplotig	CDS	8558333	8558473	.	+	0	Parent=FBgn0028670.1.mrna1;Target=FBgn0028670.1 1 141 +
ChrX	stalkie_big_nohaplotig	CDS	8560870	8562753	.	+	0	Parent=FBgn0028670.1.mrna1;Target=FBgn0028670.1 142 2025 +
ChrX	stalkie_big_nohaplotig	CDS	8562822	8563029	.	+	0	Parent=FBgn0028670.1.mrna1;Target=FBgn0028670.1 2026 2233 +
ChrX	stalkie_big_nohaplotig	CDS	8563088	8563259	.	+	2	Parent=FBgn0028670.1.mrna1;Target=FBgn0028670.1 2234 2405 +
ChrX	stalkie_big_nohaplotig	CDS	8563324	8563414	.	+	1	Parent=FBgn0028670.1.mrna1;Target=FBgn0028670.1 2406 2496 +
ChrX	gffcl	locus	8569374	8580470	.	-	.	ID=RLOC_00000461;geneIDs=comp143538_c1_seq1.path1;transcripts=comp143538_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8569374	8580470	.	-	.	ID=comp143538_c1_seq1.mrna1;geneID=comp143538_c1_seq1.path1;Name=comp143538_c1_seq1;Dir=antisensecoverage=100.0;identity=98.1;matches=1167;mismatches=22;indels=1;unknowns=0;Target=comp143538_c1_seq1 1102 1209 .;locus=RLOC_00000461
ChrX	stalkie_big_nohaplotig	exon	8569374	8569476	100	-	.	Parent=comp143538_c1_seq1.mrna1;Target=comp143538_c1_seq1 1 103 -
ChrX	stalkie_big_nohaplotig	exon	8579260	8579455	97	-	.	Parent=comp143538_c1_seq1.mrna1;Target=comp143538_c1_seq1 104 300 -
ChrX	stalkie_big_nohaplotig	exon	8579504	8579931	97	-	.	Parent=comp143538_c1_seq1.mrna1;Target=comp143538_c1_seq1 320 747 -
ChrX	stalkie_big_nohaplotig	exon	8580009	8580470	98	-	.	Parent=comp143538_c1_seq1.mrna1;Target=comp143538_c1_seq1 748 1209 -
ChrX	stalkie_big_nohaplotig	CDS	8580363	8580470	.	-	0	Parent=comp143538_c1_seq1.mrna1
ChrX	gffcl	locus	8582965	8584884	.	-	.	ID=RLOC_00000462;geneIDs=FBgn0001197.2.path1;transcripts=FBgn0001197.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8582965	8584884	.	-	.	ID=FBgn0001197.2.mrna1;geneID=FBgn0001197.2.path1;Name=FBgn0001197.2;Dir=sensecoverage=100.0;identity=100.0;matches=543;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000462
ChrX	stalkie_big_nohaplotig	exon	8582965	8583027	100	-	.	Parent=FBgn0001197.2.mrna1;Target=FBgn0001197.2 481 543 +
ChrX	stalkie_big_nohaplotig	exon	8583094	8583264	100	-	.	Parent=FBgn0001197.2.mrna1;Target=FBgn0001197.2 310 480 +
ChrX	stalkie_big_nohaplotig	exon	8584211	8584324	100	-	.	Parent=FBgn0001197.2.mrna1;Target=FBgn0001197.2 196 309 +
ChrX	stalkie_big_nohaplotig	exon	8584383	8584496	100	-	.	Parent=FBgn0001197.2.mrna1;Target=FBgn0001197.2 82 195 +
ChrX	stalkie_big_nohaplotig	exon	8584804	8584884	100	-	.	Parent=FBgn0001197.2.mrna1;Target=FBgn0001197.2 1 81 +
ChrX	stalkie_big_nohaplotig	CDS	8582965	8583027	.	-	0	Parent=FBgn0001197.2.mrna1;Target=FBgn0001197.2 481 543 +
ChrX	stalkie_big_nohaplotig	CDS	8583094	8583264	.	-	0	Parent=FBgn0001197.2.mrna1;Target=FBgn0001197.2 310 480 +
ChrX	stalkie_big_nohaplotig	CDS	8584211	8584324	.	-	0	Parent=FBgn0001197.2.mrna1;Target=FBgn0001197.2 196 309 +
ChrX	stalkie_big_nohaplotig	CDS	8584383	8584496	.	-	0	Parent=FBgn0001197.2.mrna1;Target=FBgn0001197.2 82 195 +
ChrX	stalkie_big_nohaplotig	CDS	8584804	8584884	.	-	0	Parent=FBgn0001197.2.mrna1;Target=FBgn0001197.2 1 81 +
ChrX	gffcl	locus	8587574	8589637	.	-	.	ID=RLOC_00000463;geneIDs=FBgn0038569.1.path1;transcripts=FBgn0038569.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8587574	8589637	.	-	.	ID=FBgn0038569.1.mrna1;geneID=FBgn0038569.1.path1;Name=FBgn0038569.1;Dir=sensecoverage=100.0;identity=99.8;matches=1395;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000463
ChrX	stalkie_big_nohaplotig	exon	8587574	8588200	99	-	.	Parent=FBgn0038569.1.mrna1;Target=FBgn0038569.1 772 1398 +
ChrX	stalkie_big_nohaplotig	exon	8588270	8588859	100	-	.	Parent=FBgn0038569.1.mrna1;Target=FBgn0038569.1 182 771 +
ChrX	stalkie_big_nohaplotig	exon	8589457	8589637	99	-	.	Parent=FBgn0038569.1.mrna1;Target=FBgn0038569.1 1 181 +
ChrX	stalkie_big_nohaplotig	CDS	8587574	8588200	.	-	0	Parent=FBgn0038569.1.mrna1;Target=FBgn0038569.1 772 1398 +
ChrX	stalkie_big_nohaplotig	CDS	8588270	8588859	.	-	2	Parent=FBgn0038569.1.mrna1;Target=FBgn0038569.1 182 771 +
ChrX	stalkie_big_nohaplotig	CDS	8589457	8589637	.	-	0	Parent=FBgn0038569.1.mrna1;Target=FBgn0038569.1 1 181 +
ChrX	gffcl	locus	8607631	8608479	.	-	.	ID=RLOC_00000464;geneIDs=comp147549_c0_seq1.path2;transcripts=comp147549_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	8607631	8608479	.	-	.	ID=comp147549_c0_seq1.mrna2;geneID=comp147549_c0_seq1.path2;Name=comp147549_c0_seq1;Dir=sensecoverage=91.2;identity=98.1;matches=776;mismatches=2;indels=13;unknowns=0;Target=comp147549_c0_seq1 486 665 +;locus=RLOC_00000464
ChrX	stalkie_big_nohaplotig	exon	8607631	8608191	97	-	.	Parent=comp147549_c0_seq1.mrna2;Target=comp147549_c0_seq1 273 832 +
ChrX	stalkie_big_nohaplotig	exon	8608256	8608479	100	-	.	Parent=comp147549_c0_seq1.mrna2;Target=comp147549_c0_seq1 49 272 +
ChrX	stalkie_big_nohaplotig	CDS	8607793	8607978	.	-	0	Parent=comp147549_c0_seq1.mrna2
ChrX	gffcl	locus	8613125	8613976	.	+	.	ID=RLOC_00000465;geneIDs=comp147549_c0_seq1.path1;transcripts=comp147549_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8613125	8613976	.	+	.	ID=comp147549_c0_seq1.mrna1;geneID=comp147549_c0_seq1.path1;Name=comp147549_c0_seq1;Dir=sensecoverage=91.5;identity=98.1;matches=779;mismatches=2;indels=13;unknowns=0;Target=comp147549_c0_seq1 486 665 +;locus=RLOC_00000465
ChrX	stalkie_big_nohaplotig	exon	8613125	8613348	100	+	.	Parent=comp147549_c0_seq1.mrna1;Target=comp147549_c0_seq1 49 272 +
ChrX	stalkie_big_nohaplotig	exon	8613413	8613976	97	+	.	Parent=comp147549_c0_seq1.mrna1;Target=comp147549_c0_seq1 273 835 +
ChrX	stalkie_big_nohaplotig	CDS	8613626	8613808	.	+	0	Parent=comp147549_c0_seq1.mrna1
ChrX	gffcl	locus	8626779	8627324	.	-	.	ID=RLOC_00000466;geneIDs=comp132562_c2_seq1.path1;transcripts=comp132562_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8626779	8627324	.	-	.	ID=comp132562_c2_seq1.mrna1;geneID=comp132562_c2_seq1.path1;Name=comp132562_c2_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=545;mismatches=1;indels=0;unknowns=0;Target=comp132562_c2_seq1 546 1 .;CDS_Target=comp132562_c2_seq1 70 2 .;locus=RLOC_00000466
ChrX	stalkie_big_nohaplotig	exon	8626779	8627324	99	-	.	Parent=comp132562_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	8627255	8627323	.	-	0	Parent=comp132562_c2_seq1.mrna1
ChrX	gffcl	locus	8630380	8631410	.	-	.	ID=RLOC_00000467;geneIDs=comp157823_c0_seq1.path2;transcripts=comp157823_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	8630380	8631410	.	-	.	ID=comp157823_c0_seq1.mrna2;geneID=comp157823_c0_seq1.path2;Name=comp157823_c0_seq1;Dir=indeterminatecoverage=91.1;identity=97.9;matches=1010;mismatches=21;indels=1;unknowns=0;Target=comp157823_c0_seq1 1133 102 .;CDS_Target=comp157823_c0_seq1 207 102 .;locus=RLOC_00000467
ChrX	stalkie_big_nohaplotig	exon	8630380	8631410	97	-	.	Parent=comp157823_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	8631305	8631410	.	-	2	Parent=comp157823_c0_seq1.mrna2
ChrX	gffcl	locus	8637679	8638032	.	+	.	ID=RLOC_00000468;geneIDs=comp150902_c0_seq1.path1;transcripts=comp150902_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8637679	8638032	.	+	.	ID=comp150902_c0_seq1.mrna1;geneID=comp150902_c0_seq1.path1;Name=comp150902_c0_seq1;Dir=indeterminatecoverage=96.1;identity=86.0;matches=343;mismatches=11;indels=45;unknowns=0;Target=comp150902_c0_seq1 400 2 .;CDS_Target=comp150902_c0_seq1 199 2 .;locus=RLOC_00000468
ChrX	stalkie_big_nohaplotig	exon	8637679	8638032	85	+	.	Parent=comp150902_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	8637679	8637831	.	+	0	Parent=comp150902_c0_seq1.mrna1
ChrX	gffcl	locus	8667430	8669082	.	-	.	ID=RLOC_00000469;geneIDs=comp148067_c2_seq1.path1;transcripts=comp148067_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8667430	8669082	.	-	.	ID=comp148067_c2_seq1.mrna1;geneID=comp148067_c2_seq1.path1;Name=comp148067_c2_seq1;Dir=antisensecoverage=99.9;identity=98.6;matches=783;mismatches=11;indels=0;unknowns=0;locus=RLOC_00000469
ChrX	stalkie_big_nohaplotig	exon	8667430	8667715	96	-	.	Parent=comp148067_c2_seq1.mrna1;Target=comp148067_c2_seq1 1 286 -
ChrX	stalkie_big_nohaplotig	exon	8668516	8668776	100	-	.	Parent=comp148067_c2_seq1.mrna1;Target=comp148067_c2_seq1 287 547 -
ChrX	stalkie_big_nohaplotig	exon	8668836	8669082	99	-	.	Parent=comp148067_c2_seq1.mrna1;Target=comp148067_c2_seq1 548 794 -
ChrX	stalkie_big_nohaplotig	CDS	8667686	8667715	.	-	0	Parent=comp148067_c2_seq1.mrna1;Target=comp148067_c2_seq1 257 286 .
ChrX	stalkie_big_nohaplotig	CDS	8668516	8668776	.	-	0	Parent=comp148067_c2_seq1.mrna1;Target=comp148067_c2_seq1 287 547 .
ChrX	stalkie_big_nohaplotig	CDS	8668836	8668949	.	-	0	Parent=comp148067_c2_seq1.mrna1;Target=comp148067_c2_seq1 548 661 .
ChrX	gffcl	locus	8675182	8676259	.	-	.	ID=RLOC_00000470;geneIDs=comp121530_c0_seq1.path1;transcripts=comp121530_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8675182	8676259	.	-	.	ID=comp121530_c0_seq1.mrna1;geneID=comp121530_c0_seq1.path1;Name=comp121530_c0_seq1;Dir=sensecoverage=94.5;identity=98.9;matches=892;mismatches=9;indels=1;unknowns=0;locus=RLOC_00000470
ChrX	stalkie_big_nohaplotig	exon	8675182	8675680	98	-	.	Parent=comp121530_c0_seq1.mrna1;Target=comp121530_c0_seq1 456 954 +
ChrX	stalkie_big_nohaplotig	exon	8675769	8675835	100	-	.	Parent=comp121530_c0_seq1.mrna1;Target=comp121530_c0_seq1 389 455 +
ChrX	stalkie_big_nohaplotig	exon	8675925	8676259	99	-	.	Parent=comp121530_c0_seq1.mrna1;Target=comp121530_c0_seq1 53 388 +
ChrX	stalkie_big_nohaplotig	CDS	8675646	8675680	.	-	2	Parent=comp121530_c0_seq1.mrna1;Target=comp121530_c0_seq1 456 490 +
ChrX	stalkie_big_nohaplotig	CDS	8675769	8675835	.	-	0	Parent=comp121530_c0_seq1.mrna1;Target=comp121530_c0_seq1 389 455 +
ChrX	stalkie_big_nohaplotig	CDS	8675925	8676143	.	-	0	Parent=comp121530_c0_seq1.mrna1;Target=comp121530_c0_seq1 170 388 +
ChrX	gffcl	locus	8694429	8703011	.	-	.	ID=RLOC_00000471;geneIDs=comp147282_c0_seq1.path1;transcripts=comp147282_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8694429	8703011	.	-	.	ID=comp147282_c0_seq1.mrna1;geneID=comp147282_c0_seq1.path1;Name=comp147282_c0_seq1;Dir=sensecoverage=96.3;identity=99.9;matches=817;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000471
ChrX	stalkie_big_nohaplotig	exon	8694429	8694769	99	-	.	Parent=comp147282_c0_seq1.mrna1;Target=comp147282_c0_seq1 488 828 +
ChrX	stalkie_big_nohaplotig	exon	8695704	8695769	100	-	.	Parent=comp147282_c0_seq1.mrna1;Target=comp147282_c0_seq1 422 487 +
ChrX	stalkie_big_nohaplotig	exon	8695824	8695883	100	-	.	Parent=comp147282_c0_seq1.mrna1;Target=comp147282_c0_seq1 362 421 +
ChrX	stalkie_big_nohaplotig	exon	8695938	8696048	100	-	.	Parent=comp147282_c0_seq1.mrna1;Target=comp147282_c0_seq1 251 361 +
ChrX	stalkie_big_nohaplotig	exon	8702772	8703011	100	-	.	Parent=comp147282_c0_seq1.mrna1;Target=comp147282_c0_seq1 11 250 +
ChrX	stalkie_big_nohaplotig	CDS	8694740	8694769	.	-	0	Parent=comp147282_c0_seq1.mrna1;Target=comp147282_c0_seq1 488 517 +
ChrX	stalkie_big_nohaplotig	CDS	8695704	8695769	.	-	0	Parent=comp147282_c0_seq1.mrna1;Target=comp147282_c0_seq1 422 487 +
ChrX	stalkie_big_nohaplotig	CDS	8695824	8695883	.	-	0	Parent=comp147282_c0_seq1.mrna1;Target=comp147282_c0_seq1 362 421 +
ChrX	stalkie_big_nohaplotig	CDS	8695938	8696036	.	-	0	Parent=comp147282_c0_seq1.mrna1;Target=comp147282_c0_seq1 263 361 +
ChrX	gffcl	locus	8741663	8747414	.	-	.	ID=RLOC_00000472;geneIDs=ORF2010.path1;transcripts=ORF2010.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8741663	8747414	.	-	.	ID=ORF2010.mrna1;geneID=ORF2010.path1;Name=ORF2010;Dir=sensecoverage=100.0;identity=99.7;matches=936;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000472
ChrX	stalkie_big_nohaplotig	exon	8741663	8741740	98	-	.	Parent=ORF2010.mrna1;Target=ORF2010 862 939 +
ChrX	stalkie_big_nohaplotig	exon	8741818	8741919	100	-	.	Parent=ORF2010.mrna1;Target=ORF2010 760 861 +
ChrX	stalkie_big_nohaplotig	exon	8742018	8742098	100	-	.	Parent=ORF2010.mrna1;Target=ORF2010 679 759 +
ChrX	stalkie_big_nohaplotig	exon	8742206	8742289	100	-	.	Parent=ORF2010.mrna1;Target=ORF2010 595 678 +
ChrX	stalkie_big_nohaplotig	exon	8743887	8744296	99	-	.	Parent=ORF2010.mrna1;Target=ORF2010 185 594 +
ChrX	stalkie_big_nohaplotig	exon	8746172	8746295	99	-	.	Parent=ORF2010.mrna1;Target=ORF2010 61 184 +
ChrX	stalkie_big_nohaplotig	exon	8747355	8747414	100	-	.	Parent=ORF2010.mrna1;Target=ORF2010 1 60 +
ChrX	stalkie_big_nohaplotig	CDS	8741663	8741740	.	-	0	Parent=ORF2010.mrna1;Target=ORF2010 862 939 +
ChrX	stalkie_big_nohaplotig	CDS	8741818	8741919	.	-	0	Parent=ORF2010.mrna1;Target=ORF2010 760 861 +
ChrX	stalkie_big_nohaplotig	CDS	8742018	8742098	.	-	0	Parent=ORF2010.mrna1;Target=ORF2010 679 759 +
ChrX	stalkie_big_nohaplotig	CDS	8742206	8742289	.	-	0	Parent=ORF2010.mrna1;Target=ORF2010 595 678 +
ChrX	stalkie_big_nohaplotig	CDS	8743887	8744296	.	-	2	Parent=ORF2010.mrna1;Target=ORF2010 185 594 +
ChrX	stalkie_big_nohaplotig	CDS	8746172	8746295	.	-	0	Parent=ORF2010.mrna1;Target=ORF2010 61 184 +
ChrX	stalkie_big_nohaplotig	CDS	8747355	8747414	.	-	0	Parent=ORF2010.mrna1;Target=ORF2010 1 60 +
ChrX	gffcl	locus	8749304	8749707	.	+	.	ID=RLOC_00000473;geneIDs=comp152043_c1_seq1.path1;transcripts=comp152043_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8749304	8749707	.	+	.	ID=comp152043_c1_seq1.mrna1;geneID=comp152043_c1_seq1.path1;Name=comp152043_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=404;mismatches=0;indels=0;unknowns=0;Target=comp152043_c1_seq1 404 1 .;CDS_Target=comp152043_c1_seq1 371 210 .;locus=RLOC_00000473
ChrX	stalkie_big_nohaplotig	exon	8749304	8749707	100	+	.	Parent=comp152043_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	8749513	8749674	.	+	0	Parent=comp152043_c1_seq1.mrna1
ChrX	gffcl	locus	8764085	8766347	.	+	.	ID=RLOC_00000474;geneIDs=FBgn0052075.1.path1;transcripts=FBgn0052075.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8764085	8766347	.	+	.	ID=FBgn0052075.1.mrna1;geneID=FBgn0052075.1.path1;Name=FBgn0052075.1;Dir=sensecoverage=100.0;identity=99.9;matches=1772;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000474
ChrX	stalkie_big_nohaplotig	exon	8764085	8764203	100	+	.	Parent=FBgn0052075.1.mrna1;Target=FBgn0052075.1 1 119 +
ChrX	stalkie_big_nohaplotig	exon	8764272	8765050	99	+	.	Parent=FBgn0052075.1.mrna1;Target=FBgn0052075.1 120 898 +
ChrX	stalkie_big_nohaplotig	exon	8765130	8765368	100	+	.	Parent=FBgn0052075.1.mrna1;Target=FBgn0052075.1 899 1137 +
ChrX	stalkie_big_nohaplotig	exon	8765583	8765797	100	+	.	Parent=FBgn0052075.1.mrna1;Target=FBgn0052075.1 1138 1352 +
ChrX	stalkie_big_nohaplotig	exon	8765861	8766237	100	+	.	Parent=FBgn0052075.1.mrna1;Target=FBgn0052075.1 1353 1729 +
ChrX	stalkie_big_nohaplotig	exon	8766304	8766347	100	+	.	Parent=FBgn0052075.1.mrna1;Target=FBgn0052075.1 1730 1773 +
ChrX	stalkie_big_nohaplotig	CDS	8764085	8764203	.	+	0	Parent=FBgn0052075.1.mrna1;Target=FBgn0052075.1 1 119 +
ChrX	stalkie_big_nohaplotig	CDS	8764272	8765050	.	+	1	Parent=FBgn0052075.1.mrna1;Target=FBgn0052075.1 120 898 +
ChrX	stalkie_big_nohaplotig	CDS	8765130	8765368	.	+	2	Parent=FBgn0052075.1.mrna1;Target=FBgn0052075.1 899 1137 +
ChrX	stalkie_big_nohaplotig	CDS	8765583	8765797	.	+	0	Parent=FBgn0052075.1.mrna1;Target=FBgn0052075.1 1138 1352 +
ChrX	stalkie_big_nohaplotig	CDS	8765861	8766237	.	+	1	Parent=FBgn0052075.1.mrna1;Target=FBgn0052075.1 1353 1729 +
ChrX	stalkie_big_nohaplotig	CDS	8766304	8766347	.	+	2	Parent=FBgn0052075.1.mrna1;Target=FBgn0052075.1 1730 1773 +
ChrX	gffcl	locus	8780174	8780983	.	+	.	ID=RLOC_00000475;geneIDs=FBgn0020238.1.path1;transcripts=FBgn0020238.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8780174	8780983	.	+	.	ID=FBgn0020238.1.mrna1;geneID=FBgn0020238.1.path1;Name=FBgn0020238.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=810;mismatches=0;indels=0;unknowns=0;Target=FBgn0020238.1 810 1 .;locus=RLOC_00000475
ChrX	stalkie_big_nohaplotig	exon	8780174	8780983	100	+	.	Parent=FBgn0020238.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	8780174	8780983	.	+	0	Parent=FBgn0020238.1.mrna1
ChrX	gffcl	locus	8783445	8784136	.	-	.	ID=RLOC_00000476;geneIDs=comp119217_c0_seq1.path1;transcripts=comp119217_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8783445	8784136	.	-	.	ID=comp119217_c0_seq1.mrna1;geneID=comp119217_c0_seq1.path1;Name=comp119217_c0_seq1;Dir=indeterminatecoverage=99.8;identity=83.9;matches=475;mismatches=28;indels=63;unknowns=0;Target=comp119217_c0_seq1 246 166 .;locus=RLOC_00000476
ChrX	stalkie_big_nohaplotig	exon	8783445	8783644	92	-	.	Parent=comp119217_c0_seq1.mrna1;Target=comp119217_c0_seq1 522 331 .
ChrX	stalkie_big_nohaplotig	exon	8783777	8784136	79	-	.	Parent=comp119217_c0_seq1.mrna1;Target=comp119217_c0_seq1 317 1 .
ChrX	stalkie_big_nohaplotig	CDS	8783848	8783977	.	-	0	Parent=comp119217_c0_seq1.mrna1
ChrX	gffcl	locus	8785195	8785889	.	+	.	ID=RLOC_00000477;geneIDs=comp146939_c0_seq1.path1;transcripts=comp146939_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8785195	8785889	.	+	.	ID=comp146939_c0_seq1.mrna1;geneID=comp146939_c0_seq1.path1;Name=comp146939_c0_seq1;Dir=sensecoverage=97.7;identity=99.8;matches=643;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000477
ChrX	stalkie_big_nohaplotig	exon	8785195	8785309	100	+	.	Parent=comp146939_c0_seq1.mrna1;Target=comp146939_c0_seq1 1 115 +
ChrX	stalkie_big_nohaplotig	exon	8785361	8785889	99	+	.	Parent=comp146939_c0_seq1.mrna1;Target=comp146939_c0_seq1 116 644 +
ChrX	stalkie_big_nohaplotig	CDS	8785196	8785309	.	+	0	Parent=comp146939_c0_seq1.mrna1;Target=comp146939_c0_seq1 2 115 +
ChrX	stalkie_big_nohaplotig	CDS	8785361	8785732	.	+	0	Parent=comp146939_c0_seq1.mrna1;Target=comp146939_c0_seq1 116 487 +
ChrX	gffcl	locus	8842052	8904575	.	-	.	ID=RLOC_00000480;geneIDs=comp151927_c0_seq1.path1;transcripts=comp151927_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8842052	8904575	.	-	.	ID=comp151927_c0_seq1.mrna1;geneID=comp151927_c0_seq1.path1;Name=comp151927_c0_seq1;Dir=antisensecoverage=100.0;identity=99.2;matches=2623;mismatches=16;indels=6;unknowns=0;Target=comp151927_c0_seq1 2449 2640 .;locus=RLOC_00000480
ChrX	stalkie_big_nohaplotig	exon	8842052	8843401	99	-	.	Parent=comp151927_c0_seq1.mrna1;Target=comp151927_c0_seq1 2 1351 -
ChrX	stalkie_big_nohaplotig	exon	8843467	8843561	96	-	.	Parent=comp151927_c0_seq1.mrna1;Target=comp151927_c0_seq1 1352 1446 -
ChrX	stalkie_big_nohaplotig	exon	8872364	8872492	96	-	.	Parent=comp151927_c0_seq1.mrna1;Target=comp151927_c0_seq1 1447 1575 -
ChrX	stalkie_big_nohaplotig	exon	8872577	8872602	100	-	.	Parent=comp151927_c0_seq1.mrna1;Target=comp151927_c0_seq1 1576 1601 -
ChrX	stalkie_big_nohaplotig	exon	8872662	8872831	99	-	.	Parent=comp151927_c0_seq1.mrna1;Target=comp151927_c0_seq1 1602 1771 -
ChrX	stalkie_big_nohaplotig	exon	8900307	8900340	100	-	.	Parent=comp151927_c0_seq1.mrna1;Target=comp151927_c0_seq1 1772 1805 -
ChrX	stalkie_big_nohaplotig	exon	8900393	8900540	99	-	.	Parent=comp151927_c0_seq1.mrna1;Target=comp151927_c0_seq1 1806 1953 -
ChrX	stalkie_big_nohaplotig	exon	8903883	8904575	98	-	.	Parent=comp151927_c0_seq1.mrna1;Target=comp151927_c0_seq1 1954 2640 -
ChrX	stalkie_big_nohaplotig	CDS	8904384	8904575	.	-	0	Parent=comp151927_c0_seq1.mrna1
ChrX	gffcl	locus	8887828	8888622	.	-	.	ID=RLOC_00000481;geneIDs=comp119293_c0_seq1.path1;transcripts=comp119293_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8887828	8888622	.	-	.	ID=comp119293_c0_seq1.mrna1;geneID=comp119293_c0_seq1.path1;Name=comp119293_c0_seq1;Dir=antisensecoverage=100.0;identity=97.2;matches=725;mismatches=5;indels=16;unknowns=0;locus=RLOC_00000481
ChrX	stalkie_big_nohaplotig	exon	8887828	8888415	97	-	.	Parent=comp119293_c0_seq1.mrna1;Target=comp119293_c0_seq1 1 601 -
ChrX	stalkie_big_nohaplotig	exon	8888478	8888622	95	-	.	Parent=comp119293_c0_seq1.mrna1;Target=comp119293_c0_seq1 602 743 -
ChrX	stalkie_big_nohaplotig	CDS	8888017	8888415	.	-	0	Parent=comp119293_c0_seq1.mrna1;Target=comp119293_c0_seq1 203 601 .
ChrX	stalkie_big_nohaplotig	CDS	8888478	8888480	.	-	0	Parent=comp119293_c0_seq1.mrna1;Target=comp119293_c0_seq1 602 604 .
ChrX	gffcl	locus	8896155	8896954	.	-	.	ID=RLOC_00000482;geneIDs=comp119059_c0_seq1.path2;transcripts=comp119059_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	8896155	8896954	.	-	.	ID=comp119059_c0_seq1.mrna2;geneID=comp119059_c0_seq1.path2;Name=comp119059_c0_seq1;Dir=indeterminatecoverage=97.9;identity=99.6;matches=798;mismatches=2;indels=1;unknowns=0;Target=comp119059_c0_seq1 818 18 .;CDS_Target=comp119059_c0_seq1 54 19 .;locus=RLOC_00000482
ChrX	stalkie_big_nohaplotig	exon	8896155	8896954	99	-	.	Parent=comp119059_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	8896919	8896953	.	-	0	Parent=comp119059_c0_seq1.mrna2
ChrX	gffcl	locus	8907765	8909221	.	+	.	ID=RLOC_00000483;geneIDs=ORF1919.path1;transcripts=ORF1919.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8907765	8909221	.	+	.	ID=ORF1919.mrna1;geneID=ORF1919.path1;Name=ORF1919;Dir=sensecoverage=100.0;identity=100.0;matches=960;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000483
ChrX	stalkie_big_nohaplotig	exon	8907765	8907870	100	+	.	Parent=ORF1919.mrna1;Target=ORF1919 1 106 +
ChrX	stalkie_big_nohaplotig	exon	8908185	8908404	100	+	.	Parent=ORF1919.mrna1;Target=ORF1919 107 326 +
ChrX	stalkie_big_nohaplotig	exon	8908588	8909221	100	+	.	Parent=ORF1919.mrna1;Target=ORF1919 327 960 +
ChrX	stalkie_big_nohaplotig	CDS	8907765	8907870	.	+	0	Parent=ORF1919.mrna1;Target=ORF1919 1 106 +
ChrX	stalkie_big_nohaplotig	CDS	8908185	8908404	.	+	2	Parent=ORF1919.mrna1;Target=ORF1919 107 326 +
ChrX	stalkie_big_nohaplotig	CDS	8908588	8909221	.	+	1	Parent=ORF1919.mrna1;Target=ORF1919 327 960 +
ChrX	gffcl	locus	8909277	8911448	.	.	.	ID=RLOC_00000484;geneIDs=comp58368_c0_seq1.path1,comp155776_c1_seq1.path1;transcripts=comp58368_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8909277	8911448	.	+	.	ID=comp58368_c0_seq1.mrna1;geneID=comp58368_c0_seq1.path1;Name=comp58368_c0_seq1;Dir=antisensecoverage=97.0;identity=97.2;matches=2045;mismatches=35;indels=23;unknowns=0;locus=RLOC_00000484
ChrX	stalkie_big_nohaplotig	exon	8909277	8909703	92	+	.	Parent=comp58368_c0_seq1.mrna1;Target=comp58368_c0_seq1 1673 2099 -
ChrX	stalkie_big_nohaplotig	exon	8909775	8911448	98	+	.	Parent=comp58368_c0_seq1.mrna1;Target=comp58368_c0_seq1 18 1672 -
ChrX	stalkie_big_nohaplotig	CDS	8909279	8909703	.	+	0	Parent=comp58368_c0_seq1.mrna1;Target=comp58368_c0_seq1 1673 2097 .
ChrX	stalkie_big_nohaplotig	CDS	8909775	8909787	.	+	1	Parent=comp58368_c0_seq1.mrna1;Target=comp58368_c0_seq1 1660 1672 .
ChrX	gffcl	locus	8915668	8920846	.	+	.	ID=RLOC_00000485;geneIDs=ORF1321.path1,comp150461_c0_seq1.path1;transcripts=comp150461_c0_seq1.mrna1,ORF1321.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8915668	8920846	.	+	.	ID=comp150461_c0_seq1.mrna1;geneID=comp150461_c0_seq1.path1;Name=comp150461_c0_seq1;Dir=antisensecoverage=72.8;identity=96.5;matches=1617;mismatches=29;indels=29;unknowns=0;locus=RLOC_00000485
ChrX	stalkie_big_nohaplotig	exon	8915668	8915832	99	+	.	Parent=comp150461_c0_seq1.mrna1;Target=comp150461_c0_seq1 2128 2292 -
ChrX	stalkie_big_nohaplotig	exon	8915892	8916939	99	+	.	Parent=comp150461_c0_seq1.mrna1;Target=comp150461_c0_seq1 1080 2127 -
ChrX	stalkie_big_nohaplotig	exon	8916995	8917315	100	+	.	Parent=comp150461_c0_seq1.mrna1;Target=comp150461_c0_seq1 759 1079 -
ChrX	stalkie_big_nohaplotig	exon	8917372	8917383	38	+	.	Parent=comp150461_c0_seq1.mrna1;Target=comp150461_c0_seq1 728 758 -
ChrX	stalkie_big_nohaplotig	exon	8919245	8919319	56	+	.	Parent=comp150461_c0_seq1.mrna1;Target=comp150461_c0_seq1 660 727 -
ChrX	stalkie_big_nohaplotig	exon	8919616	8919620	100	+	.	Parent=comp150461_c0_seq1.mrna1;Target=comp150461_c0_seq1 655 659 -
ChrX	stalkie_big_nohaplotig	exon	8920605	8920610	100	+	.	Parent=comp150461_c0_seq1.mrna1;Target=comp150461_c0_seq1 649 654 -
ChrX	stalkie_big_nohaplotig	exon	8920826	8920846	83	+	.	Parent=comp150461_c0_seq1.mrna1;Target=comp150461_c0_seq1 625 648 -
ChrX	stalkie_big_nohaplotig	CDS	8915903	8916939	.	+	0	Parent=comp150461_c0_seq1.mrna1;Target=comp150461_c0_seq1 1080 2116 .
ChrX	stalkie_big_nohaplotig	CDS	8916995	8917010	.	+	1	Parent=comp150461_c0_seq1.mrna1;Target=comp150461_c0_seq1 1064 1079 .
ChrX	stalkie_big_nohaplotig	mRNA	8915894	8918709	.	+	.	ID=ORF1321.mrna1;geneID=ORF1321.path1;Name=ORF1321;Dir=sensecoverage=100.0;identity=99.9;matches=1139;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000485
ChrX	stalkie_big_nohaplotig	exon	8915894	8916939	99	+	.	Parent=ORF1321.mrna1;Target=ORF1321 1 1046 +
ChrX	stalkie_big_nohaplotig	exon	8918616	8918709	100	+	.	Parent=ORF1321.mrna1;Target=ORF1321 1047 1140 +
ChrX	stalkie_big_nohaplotig	CDS	8915894	8916939	.	+	0	Parent=ORF1321.mrna1;Target=ORF1321 1 1046 +
ChrX	stalkie_big_nohaplotig	CDS	8918616	8918709	.	+	1	Parent=ORF1321.mrna1;Target=ORF1321 1047 1140 +
ChrX	gffcl	locus	8921226	8949541	.	-	.	ID=RLOC_00000486;geneIDs=FBgn0259818.path1,comp145370_c1_seq1.path1;transcripts=FBgn0259818.mrna1,FBgn0259818.mrna1,comp145370_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8921226	8949311	.	-	.	ID=FBgn0259818.mrna1;geneID=FBgn0259818.path1;Name=FBgn0259818;Dir=sensecoverage=100.0;identity=99.6;matches=1832;mismatches=7;indels=0;unknowns=0;locus=RLOC_00000486
ChrX	stalkie_big_nohaplotig	exon	8921226	8923005	99	-	.	Parent=FBgn0259818.mrna1;Target=FBgn0259818 60 1839 +
ChrX	stalkie_big_nohaplotig	exon	8927411	8927469	100	-	.	Parent=FBgn0259818.mrna1;Target=FBgn0259818 1 59 +
ChrX	stalkie_big_nohaplotig	exon	8936942	8937006	100	-	.	Parent=FBgn0259818.mrna1;Target=FBgn0259818 1529 1593 +
ChrX	stalkie_big_nohaplotig	exon	8937072	8937349	100	-	.	Parent=FBgn0259818.mrna1;Target=FBgn0259818 1251 1528 +
ChrX	stalkie_big_nohaplotig	exon	8939601	8939784	99	-	.	Parent=FBgn0259818.mrna1;Target=FBgn0259818 1067 1250 +
ChrX	stalkie_big_nohaplotig	exon	8940215	8940299	100	-	.	Parent=FBgn0259818.mrna1;Target=FBgn0259818 982 1066 +
ChrX	stalkie_big_nohaplotig	exon	8947761	8947863	100	-	.	Parent=FBgn0259818.mrna1;Target=FBgn0259818 879 981 +
ChrX	stalkie_big_nohaplotig	exon	8947933	8948459	99	-	.	Parent=FBgn0259818.mrna1;Target=FBgn0259818 352 878 +
ChrX	stalkie_big_nohaplotig	exon	8948964	8949311	100	-	.	Parent=FBgn0259818.mrna1;Target=FBgn0259818 4 351 +
ChrX	stalkie_big_nohaplotig	CDS	8921226	8923005	.	-	1	Parent=FBgn0259818.mrna1;Target=FBgn0259818 60 1839 +
ChrX	stalkie_big_nohaplotig	CDS	8927411	8927469	.	-	0	Parent=FBgn0259818.mrna1;Target=FBgn0259818 1 59 +
ChrX	stalkie_big_nohaplotig	CDS	8936942	8937006	.	-	2	Parent=FBgn0259818.mrna1;Target=FBgn0259818 1529 1593 +
ChrX	stalkie_big_nohaplotig	CDS	8937072	8937349	.	-	1	Parent=FBgn0259818.mrna1;Target=FBgn0259818 1251 1528 +
ChrX	stalkie_big_nohaplotig	CDS	8939601	8939784	.	-	2	Parent=FBgn0259818.mrna1;Target=FBgn0259818 1067 1250 +
ChrX	stalkie_big_nohaplotig	CDS	8940215	8940299	.	-	0	Parent=FBgn0259818.mrna1;Target=FBgn0259818 982 1066 +
ChrX	stalkie_big_nohaplotig	CDS	8947761	8947863	.	-	1	Parent=FBgn0259818.mrna1;Target=FBgn0259818 879 981 +
ChrX	stalkie_big_nohaplotig	CDS	8947933	8948459	.	-	0	Parent=FBgn0259818.mrna1;Target=FBgn0259818 352 878 +
ChrX	stalkie_big_nohaplotig	CDS	8948964	8949311	.	-	0	Parent=FBgn0259818.mrna1;Target=FBgn0259818 4 351 +
ChrX	stalkie_big_nohaplotig	mRNA	8936942	8949311	.	-	.	ID=FBgn0259818.mrna1;geneID=FBgn0259818.path1;Name=FBgn0259818;Dir=sensecoverage=99.3;identity=99.9;matches=1588;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000486
ChrX	stalkie_big_nohaplotig	exon	8936942	8949311	.	-	.	Parent=FBgn0259818.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8936942	8949541	.	-	.	ID=comp145370_c1_seq1.mrna1;geneID=comp145370_c1_seq1.path1;Name=comp145370_c1_seq1;Dir=antisensecoverage=99.4;identity=99.9;matches=1753;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000486
ChrX	stalkie_big_nohaplotig	exon	8936942	8937006	100	-	.	Parent=comp145370_c1_seq1.mrna1;Target=comp145370_c1_seq1 12 76 -
ChrX	stalkie_big_nohaplotig	exon	8937072	8937349	100	-	.	Parent=comp145370_c1_seq1.mrna1;Target=comp145370_c1_seq1 77 354 -
ChrX	stalkie_big_nohaplotig	exon	8939601	8939784	99	-	.	Parent=comp145370_c1_seq1.mrna1;Target=comp145370_c1_seq1 355 538 -
ChrX	stalkie_big_nohaplotig	exon	8940215	8940299	100	-	.	Parent=comp145370_c1_seq1.mrna1;Target=comp145370_c1_seq1 539 623 -
ChrX	stalkie_big_nohaplotig	exon	8947761	8947863	100	-	.	Parent=comp145370_c1_seq1.mrna1;Target=comp145370_c1_seq1 624 726 -
ChrX	stalkie_big_nohaplotig	exon	8947933	8948459	99	-	.	Parent=comp145370_c1_seq1.mrna1;Target=comp145370_c1_seq1 727 1253 -
ChrX	stalkie_big_nohaplotig	exon	8948964	8949311	100	-	.	Parent=comp145370_c1_seq1.mrna1;Target=comp145370_c1_seq1 1254 1601 -
ChrX	stalkie_big_nohaplotig	exon	8949377	8949541	100	-	.	Parent=comp145370_c1_seq1.mrna1;Target=comp145370_c1_seq1 1602 1766 -
ChrX	stalkie_big_nohaplotig	CDS	8936942	8937006	.	-	2	Parent=comp145370_c1_seq1.mrna1;Target=comp145370_c1_seq1 12 76 .
ChrX	stalkie_big_nohaplotig	CDS	8937072	8937349	.	-	1	Parent=comp145370_c1_seq1.mrna1;Target=comp145370_c1_seq1 77 354 .
ChrX	stalkie_big_nohaplotig	CDS	8939601	8939784	.	-	2	Parent=comp145370_c1_seq1.mrna1;Target=comp145370_c1_seq1 355 538 .
ChrX	stalkie_big_nohaplotig	CDS	8940215	8940299	.	-	0	Parent=comp145370_c1_seq1.mrna1;Target=comp145370_c1_seq1 539 623 .
ChrX	stalkie_big_nohaplotig	CDS	8947761	8947863	.	-	1	Parent=comp145370_c1_seq1.mrna1;Target=comp145370_c1_seq1 624 726 .
ChrX	stalkie_big_nohaplotig	CDS	8947933	8948459	.	-	0	Parent=comp145370_c1_seq1.mrna1;Target=comp145370_c1_seq1 727 1253 .
ChrX	stalkie_big_nohaplotig	CDS	8948964	8949152	.	-	0	Parent=comp145370_c1_seq1.mrna1;Target=comp145370_c1_seq1 1254 1442 .
ChrX	gffcl	locus	8955498	8956284	.	-	.	ID=RLOC_00000487;geneIDs=comp141518_c0_seq1.path1;transcripts=comp141518_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8955498	8956284	.	-	.	ID=comp141518_c0_seq1.mrna1;geneID=comp141518_c0_seq1.path1;Name=comp141518_c0_seq1;Dir=sensecoverage=100.0;identity=99.2;matches=719;mismatches=6;indels=0;unknowns=0;locus=RLOC_00000487
ChrX	stalkie_big_nohaplotig	exon	8955498	8956130	99	-	.	Parent=comp141518_c0_seq1.mrna1;Target=comp141518_c0_seq1 93 725 +
ChrX	stalkie_big_nohaplotig	exon	8956193	8956284	97	-	.	Parent=comp141518_c0_seq1.mrna1;Target=comp141518_c0_seq1 1 92 +
ChrX	stalkie_big_nohaplotig	CDS	8955738	8956130	.	-	0	Parent=comp141518_c0_seq1.mrna1;Target=comp141518_c0_seq1 93 485 +
ChrX	stalkie_big_nohaplotig	CDS	8956193	8956195	.	-	0	Parent=comp141518_c0_seq1.mrna1;Target=comp141518_c0_seq1 90 92 +
ChrX	gffcl	locus	8971383	8971740	.	-	.	ID=RLOC_00000488;geneIDs=comp336274_c0_seq1.path1;transcripts=comp336274_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8971383	8971740	.	-	.	ID=comp336274_c0_seq1.mrna1;geneID=comp336274_c0_seq1.path1;Name=comp336274_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=349;mismatches=1;indels=8;unknowns=0;Target=comp336274_c0_seq1 350 1 .;CDS_Target=comp336274_c0_seq1 11 3 .;locus=RLOC_00000488
ChrX	stalkie_big_nohaplotig	exon	8971383	8971740	97	-	.	Parent=comp336274_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	8971730	8971738	.	-	0	Parent=comp336274_c0_seq1.mrna1
ChrX	gffcl	locus	8975384	9024107	.	-	.	ID=RLOC_00000489;geneIDs=FBgn0001075.1.path1;transcripts=FBgn0001075.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	8975384	9024107	.	-	.	ID=FBgn0001075.1.mrna1;geneID=FBgn0001075.1.path1;Name=FBgn0001075.1;Dir=sensecoverage=100.0;identity=100.0;matches=9243;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000489
ChrX	stalkie_big_nohaplotig	exon	8975384	8978147	100	-	.	Parent=FBgn0001075.1.mrna1;Target=FBgn0001075.1 6483 9246 +
ChrX	stalkie_big_nohaplotig	exon	8978274	8983665	100	-	.	Parent=FBgn0001075.1.mrna1;Target=FBgn0001075.1 1091 6482 +
ChrX	stalkie_big_nohaplotig	exon	9013273	9014242	99	-	.	Parent=FBgn0001075.1.mrna1;Target=FBgn0001075.1 121 1090 +
ChrX	stalkie_big_nohaplotig	exon	9023988	9024107	100	-	.	Parent=FBgn0001075.1.mrna1;Target=FBgn0001075.1 1 120 +
ChrX	stalkie_big_nohaplotig	CDS	8975384	8978147	.	-	1	Parent=FBgn0001075.1.mrna1;Target=FBgn0001075.1 6483 9246 +
ChrX	stalkie_big_nohaplotig	CDS	8978274	8983665	.	-	2	Parent=FBgn0001075.1.mrna1;Target=FBgn0001075.1 1091 6482 +
ChrX	stalkie_big_nohaplotig	CDS	9013273	9014242	.	-	0	Parent=FBgn0001075.1.mrna1;Target=FBgn0001075.1 121 1090 +
ChrX	stalkie_big_nohaplotig	CDS	9023988	9024107	.	-	0	Parent=FBgn0001075.1.mrna1;Target=FBgn0001075.1 1 120 +
ChrX	gffcl	locus	9098395	9099163	.	+	.	ID=RLOC_00000490;geneIDs=ORF3050.path1;transcripts=ORF3050.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9098395	9099163	.	+	.	ID=ORF3050.mrna1;geneID=ORF3050.path1;Name=ORF3050;Dir=indeterminatecoverage=99.4;identity=100.0;matches=769;mismatches=0;indels=0;unknowns=0;Target=ORF3050 774 6 .;CDS_Target=ORF3050 774 7 .;locus=RLOC_00000490
ChrX	stalkie_big_nohaplotig	exon	9098395	9099163	100	+	.	Parent=ORF3050.mrna1
ChrX	stalkie_big_nohaplotig	CDS	9098396	9099163	.	+	0	Parent=ORF3050.mrna1
ChrX	gffcl	locus	9207488	9208351	.	-	.	ID=RLOC_00000491;geneIDs=comp1138285_c0_seq1.path1;transcripts=comp1138285_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9207488	9208351	.	-	.	ID=comp1138285_c0_seq1.mrna1;geneID=comp1138285_c0_seq1.path1;Name=comp1138285_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.7;matches=861;mismatches=3;indels=0;unknowns=0;Target=comp1138285_c0_seq1 865 2 .;CDS_Target=comp1138285_c0_seq1 348 130 .;locus=RLOC_00000491
ChrX	stalkie_big_nohaplotig	exon	9207488	9208351	99	-	.	Parent=comp1138285_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	9208005	9208223	.	-	0	Parent=comp1138285_c0_seq1.mrna1
ChrX	gffcl	locus	9303742	9312588	.	-	.	ID=RLOC_00000492;geneIDs=comp150515_c0_seq1.path1;transcripts=comp150515_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9303742	9312588	.	-	.	ID=comp150515_c0_seq1.mrna1;geneID=comp150515_c0_seq1.path1;Name=comp150515_c0_seq1;Dir=antisensecoverage=98.3;identity=97.2;matches=1494;mismatches=13;indels=30;unknowns=0;Target=comp150515_c0_seq1 1020 1388 .;locus=RLOC_00000492
ChrX	stalkie_big_nohaplotig	exon	9303742	9303850	96	-	.	Parent=comp150515_c0_seq1.mrna1;Target=comp150515_c0_seq1 2 110 -
ChrX	stalkie_big_nohaplotig	exon	9303914	9304253	97	-	.	Parent=comp150515_c0_seq1.mrna1;Target=comp150515_c0_seq1 111 450 -
ChrX	stalkie_big_nohaplotig	exon	9305738	9306320	94	-	.	Parent=comp150515_c0_seq1.mrna1;Target=comp150515_c0_seq1 451 1015 -
ChrX	stalkie_big_nohaplotig	exon	9312090	9312588	100	-	.	Parent=comp150515_c0_seq1.mrna1;Target=comp150515_c0_seq1 1016 1514 -
ChrX	stalkie_big_nohaplotig	CDS	9312094	9312462	.	-	0	Parent=comp150515_c0_seq1.mrna1
ChrX	gffcl	locus	9314923	9315907	.	-	.	ID=RLOC_00000493;geneIDs=comp151872_c0_seq1.path1;transcripts=comp151872_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9314923	9315907	.	-	.	ID=comp151872_c0_seq1.mrna1;geneID=comp151872_c0_seq1.path1;Name=comp151872_c0_seq1;Dir=sensecoverage=100.0;identity=97.2;matches=915;mismatches=12;indels=14;unknowns=0;locus=RLOC_00000493
ChrX	stalkie_big_nohaplotig	exon	9314923	9315784	97	-	.	Parent=comp151872_c0_seq1.mrna1;Target=comp151872_c0_seq1 70 937 +
ChrX	stalkie_big_nohaplotig	exon	9315839	9315907	94	-	.	Parent=comp151872_c0_seq1.mrna1;Target=comp151872_c0_seq1 1 69 +
ChrX	stalkie_big_nohaplotig	CDS	9315674	9315784	.	-	0	Parent=comp151872_c0_seq1.mrna1;Target=comp151872_c0_seq1 70 180 +
ChrX	stalkie_big_nohaplotig	CDS	9315839	9315853	.	-	0	Parent=comp151872_c0_seq1.mrna1;Target=comp151872_c0_seq1 55 69 +
ChrX	gffcl	locus	9318111	9319095	.	+	.	ID=RLOC_00000494;geneIDs=comp151872_c0_seq1.path2;transcripts=comp151872_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	9318111	9319095	.	+	.	ID=comp151872_c0_seq1.mrna2;geneID=comp151872_c0_seq1.path2;Name=comp151872_c0_seq1;Dir=sensecoverage=100.0;identity=97.2;matches=915;mismatches=12;indels=14;unknowns=0;locus=RLOC_00000494
ChrX	stalkie_big_nohaplotig	exon	9318111	9318179	94	+	.	Parent=comp151872_c0_seq1.mrna2;Target=comp151872_c0_seq1 1 69 +
ChrX	stalkie_big_nohaplotig	exon	9318234	9319095	97	+	.	Parent=comp151872_c0_seq1.mrna2;Target=comp151872_c0_seq1 70 937 +
ChrX	stalkie_big_nohaplotig	CDS	9318165	9318179	.	+	0	Parent=comp151872_c0_seq1.mrna2;Target=comp151872_c0_seq1 55 69 +
ChrX	stalkie_big_nohaplotig	CDS	9318234	9318344	.	+	0	Parent=comp151872_c0_seq1.mrna2;Target=comp151872_c0_seq1 70 180 +
ChrX	gffcl	locus	9328218	9328815	.	-	.	ID=RLOC_00000495;geneIDs=comp100453_c0_seq1.path1;transcripts=comp100453_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9328218	9328815	.	-	.	ID=comp100453_c0_seq1.mrna1;geneID=comp100453_c0_seq1.path1;Name=comp100453_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=598;mismatches=0;indels=0;unknowns=0;Target=comp100453_c0_seq1 598 1 .;CDS_Target=comp100453_c0_seq1 568 449 .;locus=RLOC_00000495
ChrX	stalkie_big_nohaplotig	exon	9328218	9328815	100	-	.	Parent=comp100453_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	9328248	9328367	.	-	0	Parent=comp100453_c0_seq1.mrna1
ChrX	gffcl	locus	9338119	9338549	.	+	.	ID=RLOC_00000496;geneIDs=FBgn0024244.1.path1;transcripts=FBgn0024244.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9338119	9338549	.	+	.	ID=FBgn0024244.1.mrna1;geneID=FBgn0024244.1.path1;Name=FBgn0024244.1;Dir=sensecoverage=100.0;identity=100.0;matches=309;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000496
ChrX	stalkie_big_nohaplotig	exon	9338119	9338405	100	+	.	Parent=FBgn0024244.1.mrna1;Target=FBgn0024244.1 1 287 +
ChrX	stalkie_big_nohaplotig	exon	9338528	9338549	100	+	.	Parent=FBgn0024244.1.mrna1;Target=FBgn0024244.1 288 309 +
ChrX	stalkie_big_nohaplotig	CDS	9338119	9338405	.	+	0	Parent=FBgn0024244.1.mrna1;Target=FBgn0024244.1 1 287 +
ChrX	stalkie_big_nohaplotig	CDS	9338528	9338549	.	+	1	Parent=FBgn0024244.1.mrna1;Target=FBgn0024244.1 288 309 +
ChrX	gffcl	locus	9338914	9341486	.	+	.	ID=RLOC_00000497;geneIDs=comp116975_c0_seq1.path1,comp149414_c0_seq1.path1;transcripts=comp149414_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9338914	9340630	.	+	.	ID=comp149414_c0_seq1.mrna1;geneID=comp149414_c0_seq1.path1;Name=comp149414_c0_seq1;Dir=indeterminatecoverage=99.5;identity=100.0;matches=1717;mismatches=0;indels=0;unknowns=0;Target=comp149414_c0_seq1 1717 1 .;CDS_Target=comp149414_c0_seq1 118 2 .;locus=RLOC_00000497
ChrX	stalkie_big_nohaplotig	exon	9338914	9340630	100	+	.	Parent=comp149414_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	9338915	9339031	.	+	0	Parent=comp149414_c0_seq1.mrna1
ChrX	gffcl	locus	9382360	9384811	.	-	.	ID=RLOC_00000498;geneIDs=FBgn0004892.1.path1;transcripts=FBgn0004892.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9382360	9384811	.	-	.	ID=FBgn0004892.1.mrna1;geneID=FBgn0004892.1.path1;Name=FBgn0004892.1;Dir=sensecoverage=100.0;identity=99.9;matches=1559;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000498
ChrX	stalkie_big_nohaplotig	exon	9382360	9382795	100	-	.	Parent=FBgn0004892.1.mrna1;Target=FBgn0004892.1 1125 1560 +
ChrX	stalkie_big_nohaplotig	exon	9383688	9384811	99	-	.	Parent=FBgn0004892.1.mrna1;Target=FBgn0004892.1 1 1124 +
ChrX	stalkie_big_nohaplotig	CDS	9382360	9382795	.	-	1	Parent=FBgn0004892.1.mrna1;Target=FBgn0004892.1 1125 1560 +
ChrX	stalkie_big_nohaplotig	CDS	9383688	9384811	.	-	0	Parent=FBgn0004892.1.mrna1;Target=FBgn0004892.1 1 1124 +
ChrX	gffcl	locus	9432738	9433598	.	-	.	ID=RLOC_00000499;geneIDs=FBgn0002985.1.path1;transcripts=FBgn0002985.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9432738	9433598	.	-	.	ID=FBgn0002985.1.mrna1;geneID=FBgn0002985.1.path1;Name=FBgn0002985.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=861;mismatches=0;indels=0;unknowns=0;Target=FBgn0002985.1 861 1 .;locus=RLOC_00000499
ChrX	stalkie_big_nohaplotig	exon	9432738	9433598	100	-	.	Parent=FBgn0002985.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	9432738	9433598	.	-	0	Parent=FBgn0002985.1.mrna1
ChrX	gffcl	locus	9433633	9434266	.	-	.	ID=RLOC_00000500;geneIDs=comp46790_c1_seq1.path1;transcripts=comp46790_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9433633	9434266	.	-	.	ID=comp46790_c1_seq1.mrna1;geneID=comp46790_c1_seq1.path1;Name=comp46790_c1_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=446;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000500
ChrX	stalkie_big_nohaplotig	exon	9433633	9433906	100	-	.	Parent=comp46790_c1_seq1.mrna1;Target=comp46790_c1_seq1 1 274 -
ChrX	stalkie_big_nohaplotig	exon	9434095	9434266	100	-	.	Parent=comp46790_c1_seq1.mrna1;Target=comp46790_c1_seq1 275 446 -
ChrX	stalkie_big_nohaplotig	CDS	9433635	9433906	.	-	2	Parent=comp46790_c1_seq1.mrna1;Target=comp46790_c1_seq1 3 274 .
ChrX	stalkie_big_nohaplotig	CDS	9434095	9434167	.	-	0	Parent=comp46790_c1_seq1.mrna1;Target=comp46790_c1_seq1 275 347 .
ChrX	gffcl	locus	9455027	9456486	.	-	.	ID=RLOC_00000501;geneIDs=FBgn0029795.1.path1;transcripts=FBgn0029795.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9455027	9456486	.	-	.	ID=FBgn0029795.1.mrna1;geneID=FBgn0029795.1.path1;Name=FBgn0029795.1;Dir=sensecoverage=99.8;identity=99.4;matches=1274;mismatches=7;indels=1;unknowns=0;locus=RLOC_00000501
ChrX	stalkie_big_nohaplotig	exon	9455027	9455374	99	-	.	Parent=FBgn0029795.1.mrna1;Target=FBgn0029795.1 935 1282 +
ChrX	stalkie_big_nohaplotig	exon	9455432	9456163	99	-	.	Parent=FBgn0029795.1.mrna1;Target=FBgn0029795.1 203 934 +
ChrX	stalkie_big_nohaplotig	exon	9456230	9456352	100	-	.	Parent=FBgn0029795.1.mrna1;Target=FBgn0029795.1 80 202 +
ChrX	stalkie_big_nohaplotig	exon	9456409	9456486	97	-	.	Parent=FBgn0029795.1.mrna1;Target=FBgn0029795.1 1 79 +
ChrX	stalkie_big_nohaplotig	CDS	9456340	9456352	.	-	2	Parent=FBgn0029795.1.mrna1;Target=FBgn0029795.1 80 92 +
ChrX	stalkie_big_nohaplotig	CDS	9456409	9456484	.	-	0	Parent=FBgn0029795.1.mrna1;Target=FBgn0029795.1 3 79 +
ChrX	gffcl	locus	9456654	9457527	.	-	.	ID=RLOC_00000502;geneIDs=ORF2682.path1;transcripts=ORF2682.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9456654	9457527	.	-	.	ID=ORF2682.mrna1;geneID=ORF2682.path1;Name=ORF2682;Dir=sensecoverage=100.0;identity=99.3;matches=816;mismatches=6;indels=0;unknowns=0;locus=RLOC_00000502
ChrX	stalkie_big_nohaplotig	exon	9456654	9457116	99	-	.	Parent=ORF2682.mrna1;Target=ORF2682 360 822 +
ChrX	stalkie_big_nohaplotig	exon	9457169	9457527	99	-	.	Parent=ORF2682.mrna1;Target=ORF2682 1 359 +
ChrX	stalkie_big_nohaplotig	CDS	9456654	9457116	.	-	1	Parent=ORF2682.mrna1;Target=ORF2682 360 822 +
ChrX	stalkie_big_nohaplotig	CDS	9457169	9457527	.	-	0	Parent=ORF2682.mrna1;Target=ORF2682 1 359 +
ChrX	gffcl	locus	9459114	11335583	.	+	.	ID=RLOC_00000503;geneIDs=comp154529_c0_seq1.path1;transcripts=comp154529_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9459114	11335583	.	+	.	ID=comp154529_c0_seq1.mrna1;geneID=comp154529_c0_seq1.path1;Name=comp154529_c0_seq1;Dir=sensecoverage=97.3;identity=99.0;matches=1354;mismatches=13;indels=0;unknowns=0;locus=RLOC_00000503
ChrX	stalkie_big_nohaplotig	exon	9459114	9459415	100	+	.	Parent=comp154529_c0_seq1.mrna1;Target=comp154529_c0_seq1 1 302 +
ChrX	stalkie_big_nohaplotig	exon	9459471	9459667	97	+	.	Parent=comp154529_c0_seq1.mrna1;Target=comp154529_c0_seq1 303 499 +
ChrX	stalkie_big_nohaplotig	exon	9459743	9460581	99	+	.	Parent=comp154529_c0_seq1.mrna1;Target=comp154529_c0_seq1 500 1338 +
ChrX	stalkie_big_nohaplotig	exon	11311832	11311833	50	+	.	Parent=comp154529_c0_seq1.mrna1;Target=comp154529_c0_seq1 1339 1340 +
ChrX	stalkie_big_nohaplotig	exon	11314282	11314283	100	+	.	Parent=comp154529_c0_seq1.mrna1;Target=comp154529_c0_seq1 1341 1342 +
ChrX	stalkie_big_nohaplotig	exon	11326503	11326510	100	+	.	Parent=comp154529_c0_seq1.mrna1;Target=comp154529_c0_seq1 1343 1350 +
ChrX	stalkie_big_nohaplotig	exon	11331698	11331703	100	+	.	Parent=comp154529_c0_seq1.mrna1;Target=comp154529_c0_seq1 1351 1356 +
ChrX	stalkie_big_nohaplotig	exon	11335402	11335406	60	+	.	Parent=comp154529_c0_seq1.mrna1;Target=comp154529_c0_seq1 1357 1361 +
ChrX	stalkie_big_nohaplotig	exon	11335578	11335583	100	+	.	Parent=comp154529_c0_seq1.mrna1;Target=comp154529_c0_seq1 1362 1367 +
ChrX	stalkie_big_nohaplotig	CDS	9459239	9459415	.	+	0	Parent=comp154529_c0_seq1.mrna1;Target=comp154529_c0_seq1 126 302 +
ChrX	stalkie_big_nohaplotig	CDS	9459471	9459667	.	+	0	Parent=comp154529_c0_seq1.mrna1;Target=comp154529_c0_seq1 303 499 +
ChrX	stalkie_big_nohaplotig	CDS	9459743	9459962	.	+	1	Parent=comp154529_c0_seq1.mrna1;Target=comp154529_c0_seq1 500 719 +
ChrX	gffcl	locus	9461850	9466108	.	-	.	ID=RLOC_00000504;geneIDs=FBgn0031574.1.path1;transcripts=FBgn0031574.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9461850	9466108	.	-	.	ID=FBgn0031574.1.mrna1;geneID=FBgn0031574.1.path1;Name=FBgn0031574.1;Dir=sensecoverage=100.0;identity=99.9;matches=2950;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000504
ChrX	stalkie_big_nohaplotig	exon	9461850	9462116	100	-	.	Parent=FBgn0031574.1.mrna1;Target=FBgn0031574.1 2686 2952 +
ChrX	stalkie_big_nohaplotig	exon	9462182	9462625	100	-	.	Parent=FBgn0031574.1.mrna1;Target=FBgn0031574.1 2242 2685 +
ChrX	stalkie_big_nohaplotig	exon	9462690	9463129	100	-	.	Parent=FBgn0031574.1.mrna1;Target=FBgn0031574.1 1802 2241 +
ChrX	stalkie_big_nohaplotig	exon	9463516	9463640	100	-	.	Parent=FBgn0031574.1.mrna1;Target=FBgn0031574.1 1677 1801 +
ChrX	stalkie_big_nohaplotig	exon	9464027	9464197	100	-	.	Parent=FBgn0031574.1.mrna1;Target=FBgn0031574.1 1506 1676 +
ChrX	stalkie_big_nohaplotig	exon	9464277	9464463	100	-	.	Parent=FBgn0031574.1.mrna1;Target=FBgn0031574.1 1319 1505 +
ChrX	stalkie_big_nohaplotig	exon	9464523	9464885	99	-	.	Parent=FBgn0031574.1.mrna1;Target=FBgn0031574.1 956 1318 +
ChrX	stalkie_big_nohaplotig	exon	9464942	9465416	99	-	.	Parent=FBgn0031574.1.mrna1;Target=FBgn0031574.1 481 955 +
ChrX	stalkie_big_nohaplotig	exon	9465629	9466108	100	-	.	Parent=FBgn0031574.1.mrna1;Target=FBgn0031574.1 1 480 +
ChrX	stalkie_big_nohaplotig	CDS	9461850	9462116	.	-	0	Parent=FBgn0031574.1.mrna1;Target=FBgn0031574.1 2686 2952 +
ChrX	stalkie_big_nohaplotig	CDS	9462182	9462625	.	-	0	Parent=FBgn0031574.1.mrna1;Target=FBgn0031574.1 2242 2685 +
ChrX	stalkie_big_nohaplotig	CDS	9462690	9463129	.	-	2	Parent=FBgn0031574.1.mrna1;Target=FBgn0031574.1 1802 2241 +
ChrX	stalkie_big_nohaplotig	CDS	9463516	9463640	.	-	1	Parent=FBgn0031574.1.mrna1;Target=FBgn0031574.1 1677 1801 +
ChrX	stalkie_big_nohaplotig	CDS	9464027	9464197	.	-	1	Parent=FBgn0031574.1.mrna1;Target=FBgn0031574.1 1506 1676 +
ChrX	stalkie_big_nohaplotig	CDS	9464277	9464463	.	-	2	Parent=FBgn0031574.1.mrna1;Target=FBgn0031574.1 1319 1505 +
ChrX	stalkie_big_nohaplotig	CDS	9464523	9464885	.	-	2	Parent=FBgn0031574.1.mrna1;Target=FBgn0031574.1 956 1318 +
ChrX	stalkie_big_nohaplotig	CDS	9464942	9465416	.	-	0	Parent=FBgn0031574.1.mrna1;Target=FBgn0031574.1 481 955 +
ChrX	stalkie_big_nohaplotig	CDS	9465629	9466108	.	-	0	Parent=FBgn0031574.1.mrna1;Target=FBgn0031574.1 1 480 +
ChrX	gffcl	locus	9519054	9519513	.	-	.	ID=RLOC_00000505;geneIDs=comp140685_c0_seq1.path1;transcripts=comp140685_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9519054	9519513	.	-	.	ID=comp140685_c0_seq1.mrna1;geneID=comp140685_c0_seq1.path1;Name=comp140685_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=451;mismatches=3;indels=7;unknowns=0;Target=comp140685_c0_seq1 455 1 .;CDS_Target=comp140685_c0_seq1 173 3 .;locus=RLOC_00000505
ChrX	stalkie_big_nohaplotig	exon	9519054	9519513	97	-	.	Parent=comp140685_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	9519341	9519511	.	-	0	Parent=comp140685_c0_seq1.mrna1
ChrX	gffcl	locus	9533545	9534456	.	-	.	ID=RLOC_00000507;geneIDs=FBgn0003430.1.path1;transcripts=FBgn0003430.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9533545	9534456	.	-	.	ID=FBgn0003430.1.mrna1;geneID=FBgn0003430.1.path1;Name=FBgn0003430.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=912;mismatches=0;indels=0;unknowns=0;Target=FBgn0003430.1 912 1 .;locus=RLOC_00000507
ChrX	stalkie_big_nohaplotig	exon	9533545	9534456	100	-	.	Parent=FBgn0003430.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	9533545	9534456	.	-	0	Parent=FBgn0003430.1.mrna1
ChrX	gffcl	locus	9569823	9572617	.	+	.	ID=RLOC_00000508;geneIDs=FBgn0031573.1.path1;transcripts=FBgn0031573.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9569823	9572617	.	+	.	ID=FBgn0031573.1.mrna1;geneID=FBgn0031573.1.path1;Name=FBgn0031573.1;Dir=sensecoverage=100.0;identity=99.7;matches=2352;mismatches=5;indels=1;unknowns=0;locus=RLOC_00000508
ChrX	stalkie_big_nohaplotig	exon	9569823	9569896	100	+	.	Parent=FBgn0031573.1.mrna1;Target=FBgn0031573.1 1 74 +
ChrX	stalkie_big_nohaplotig	exon	9569954	9570023	100	+	.	Parent=FBgn0031573.1.mrna1;Target=FBgn0031573.1 75 144 +
ChrX	stalkie_big_nohaplotig	exon	9570081	9570630	99	+	.	Parent=FBgn0031573.1.mrna1;Target=FBgn0031573.1 145 694 +
ChrX	stalkie_big_nohaplotig	exon	9570787	9570974	100	+	.	Parent=FBgn0031573.1.mrna1;Target=FBgn0031573.1 695 882 +
ChrX	stalkie_big_nohaplotig	exon	9571023	9571379	100	+	.	Parent=FBgn0031573.1.mrna1;Target=FBgn0031573.1 883 1239 +
ChrX	stalkie_big_nohaplotig	exon	9571443	9571750	99	+	.	Parent=FBgn0031573.1.mrna1;Target=FBgn0031573.1 1240 1547 +
ChrX	stalkie_big_nohaplotig	exon	9571808	9572617	99	+	.	Parent=FBgn0031573.1.mrna1;Target=FBgn0031573.1 1548 2358 +
ChrX	stalkie_big_nohaplotig	CDS	9569823	9569896	.	+	0	Parent=FBgn0031573.1.mrna1;Target=FBgn0031573.1 1 74 +
ChrX	stalkie_big_nohaplotig	CDS	9569954	9570023	.	+	1	Parent=FBgn0031573.1.mrna1;Target=FBgn0031573.1 75 144 +
ChrX	stalkie_big_nohaplotig	CDS	9570081	9570630	.	+	0	Parent=FBgn0031573.1.mrna1;Target=FBgn0031573.1 145 694 +
ChrX	stalkie_big_nohaplotig	CDS	9570787	9570974	.	+	2	Parent=FBgn0031573.1.mrna1;Target=FBgn0031573.1 695 882 +
ChrX	stalkie_big_nohaplotig	CDS	9571023	9571379	.	+	0	Parent=FBgn0031573.1.mrna1;Target=FBgn0031573.1 883 1239 +
ChrX	stalkie_big_nohaplotig	CDS	9571443	9571750	.	+	0	Parent=FBgn0031573.1.mrna1;Target=FBgn0031573.1 1240 1547 +
ChrX	stalkie_big_nohaplotig	CDS	9571808	9572617	.	+	1	Parent=FBgn0031573.1.mrna1;Target=FBgn0031573.1 1548 2358 +
ChrX	gffcl	locus	9581567	9585564	.	-	.	ID=RLOC_00000509;geneIDs=FBgn0021800.1.path1;transcripts=FBgn0021800.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9581567	9585564	.	-	.	ID=FBgn0021800.1.mrna1;geneID=FBgn0021800.1.path1;Name=FBgn0021800.1;Dir=sensecoverage=100.0;identity=100.0;matches=1044;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000509
ChrX	stalkie_big_nohaplotig	exon	9581567	9582085	100	-	.	Parent=FBgn0021800.1.mrna1;Target=FBgn0021800.1 526 1044 +
ChrX	stalkie_big_nohaplotig	exon	9584861	9585195	100	-	.	Parent=FBgn0021800.1.mrna1;Target=FBgn0021800.1 191 525 +
ChrX	stalkie_big_nohaplotig	exon	9585261	9585315	100	-	.	Parent=FBgn0021800.1.mrna1;Target=FBgn0021800.1 136 190 +
ChrX	stalkie_big_nohaplotig	exon	9585430	9585564	100	-	.	Parent=FBgn0021800.1.mrna1;Target=FBgn0021800.1 1 135 +
ChrX	stalkie_big_nohaplotig	CDS	9581567	9582085	.	-	0	Parent=FBgn0021800.1.mrna1;Target=FBgn0021800.1 526 1044 +
ChrX	stalkie_big_nohaplotig	CDS	9584861	9585195	.	-	2	Parent=FBgn0021800.1.mrna1;Target=FBgn0021800.1 191 525 +
ChrX	stalkie_big_nohaplotig	CDS	9585261	9585315	.	-	0	Parent=FBgn0021800.1.mrna1;Target=FBgn0021800.1 136 190 +
ChrX	stalkie_big_nohaplotig	CDS	9585430	9585564	.	-	0	Parent=FBgn0021800.1.mrna1;Target=FBgn0021800.1 1 135 +
ChrX	gffcl	locus	9613830	9615322	.	+	.	ID=RLOC_00000510;geneIDs=comp116431_c0_seq1.path1,comp128068_c0_seq1.path1;transcripts=comp128068_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9613830	9614908	.	+	.	ID=comp128068_c0_seq1.mrna1;geneID=comp128068_c0_seq1.path1;Name=comp128068_c0_seq1;Dir=sensecoverage=98.0;identity=99.6;matches=1009;mismatches=4;indels=0;unknowns=0;Target=comp128068_c0_seq1 690 914 +;locus=RLOC_00000510
ChrX	stalkie_big_nohaplotig	exon	9613830	9614382	99	+	.	Parent=comp128068_c0_seq1.mrna1;Target=comp128068_c0_seq1 1 553 +
ChrX	stalkie_big_nohaplotig	exon	9614449	9614908	100	+	.	Parent=comp128068_c0_seq1.mrna1;Target=comp128068_c0_seq1 554 1013 +
ChrX	stalkie_big_nohaplotig	CDS	9614585	9614809	.	+	0	Parent=comp128068_c0_seq1.mrna1
ChrX	gffcl	locus	9676015	9708339	.	+	.	ID=RLOC_00000511;geneIDs=FBgn0045852.1.path1;transcripts=FBgn0045852.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9676015	9708339	.	+	.	ID=FBgn0045852.1.mrna1;geneID=FBgn0045852.1.path1;Name=FBgn0045852.1;Dir=sensecoverage=100.0;identity=99.9;matches=3319;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000511
ChrX	stalkie_big_nohaplotig	exon	9676015	9676063	100	+	.	Parent=FBgn0045852.1.mrna1;Target=FBgn0045852.1 1 49 +
ChrX	stalkie_big_nohaplotig	exon	9680374	9680900	99	+	.	Parent=FBgn0045852.1.mrna1;Target=FBgn0045852.1 50 576 +
ChrX	stalkie_big_nohaplotig	exon	9688922	9689050	100	+	.	Parent=FBgn0045852.1.mrna1;Target=FBgn0045852.1 577 705 +
ChrX	stalkie_big_nohaplotig	exon	9689111	9689261	100	+	.	Parent=FBgn0045852.1.mrna1;Target=FBgn0045852.1 706 856 +
ChrX	stalkie_big_nohaplotig	exon	9697383	9697533	100	+	.	Parent=FBgn0045852.1.mrna1;Target=FBgn0045852.1 857 1007 +
ChrX	stalkie_big_nohaplotig	exon	9700777	9700933	100	+	.	Parent=FBgn0045852.1.mrna1;Target=FBgn0045852.1 1008 1164 +
ChrX	stalkie_big_nohaplotig	exon	9706117	9707070	100	+	.	Parent=FBgn0045852.1.mrna1;Target=FBgn0045852.1 1165 2118 +
ChrX	stalkie_big_nohaplotig	exon	9707137	9708339	100	+	.	Parent=FBgn0045852.1.mrna1;Target=FBgn0045852.1 2119 3321 +
ChrX	stalkie_big_nohaplotig	CDS	9676015	9676063	.	+	0	Parent=FBgn0045852.1.mrna1;Target=FBgn0045852.1 1 49 +
ChrX	stalkie_big_nohaplotig	CDS	9680374	9680900	.	+	2	Parent=FBgn0045852.1.mrna1;Target=FBgn0045852.1 50 576 +
ChrX	stalkie_big_nohaplotig	CDS	9688922	9689050	.	+	0	Parent=FBgn0045852.1.mrna1;Target=FBgn0045852.1 577 705 +
ChrX	stalkie_big_nohaplotig	CDS	9689111	9689261	.	+	0	Parent=FBgn0045852.1.mrna1;Target=FBgn0045852.1 706 856 +
ChrX	stalkie_big_nohaplotig	CDS	9697383	9697533	.	+	2	Parent=FBgn0045852.1.mrna1;Target=FBgn0045852.1 857 1007 +
ChrX	stalkie_big_nohaplotig	CDS	9700777	9700933	.	+	1	Parent=FBgn0045852.1.mrna1;Target=FBgn0045852.1 1008 1164 +
ChrX	stalkie_big_nohaplotig	CDS	9706117	9707070	.	+	0	Parent=FBgn0045852.1.mrna1;Target=FBgn0045852.1 1165 2118 +
ChrX	stalkie_big_nohaplotig	CDS	9707137	9708339	.	+	0	Parent=FBgn0045852.1.mrna1;Target=FBgn0045852.1 2119 3321 +
ChrX	gffcl	locus	9771926	9773557	.	+	.	ID=RLOC_00000512;geneIDs=FBgn0032707.1.path1;transcripts=FBgn0032707.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9771926	9773557	.	+	.	ID=FBgn0032707.1.mrna1;geneID=FBgn0032707.1.path1;Name=FBgn0032707.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1630;mismatches=2;indels=0;unknowns=0;Target=FBgn0032707.1 1632 1 .;locus=RLOC_00000512
ChrX	stalkie_big_nohaplotig	exon	9771926	9773557	99	+	.	Parent=FBgn0032707.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	9771926	9773557	.	+	0	Parent=FBgn0032707.1.mrna1
ChrX	gffcl	locus	9780042	9785362	.	-	.	ID=RLOC_00000513;geneIDs=FBgn0031842.1.path1;transcripts=FBgn0031842.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9780042	9785362	.	-	.	ID=FBgn0031842.1.mrna1;geneID=FBgn0031842.1.path1;Name=FBgn0031842.1;Dir=sensecoverage=100.0;identity=99.9;matches=4027;mismatches=3;indels=1;unknowns=7;Target=FBgn0031842.1 3 77 +;locus=RLOC_00000513
ChrX	stalkie_big_nohaplotig	exon	9780042	9780112	100	-	.	Parent=FBgn0031842.1.mrna1;Target=FBgn0031842.1 3968 4038 +
ChrX	stalkie_big_nohaplotig	exon	9780183	9780779	100	-	.	Parent=FBgn0031842.1.mrna1;Target=FBgn0031842.1 3371 3967 +
ChrX	stalkie_big_nohaplotig	exon	9780853	9781058	100	-	.	Parent=FBgn0031842.1.mrna1;Target=FBgn0031842.1 3165 3370 +
ChrX	stalkie_big_nohaplotig	exon	9781133	9781234	100	-	.	Parent=FBgn0031842.1.mrna1;Target=FBgn0031842.1 3063 3164 +
ChrX	stalkie_big_nohaplotig	exon	9781300	9781460	100	-	.	Parent=FBgn0031842.1.mrna1;Target=FBgn0031842.1 2902 3062 +
ChrX	stalkie_big_nohaplotig	exon	9781521	9781664	98	-	.	Parent=FBgn0031842.1.mrna1;Target=FBgn0031842.1 2758 2901 +
ChrX	stalkie_big_nohaplotig	exon	9781728	9782047	99	-	.	Parent=FBgn0031842.1.mrna1;Target=FBgn0031842.1 2438 2757 +
ChrX	stalkie_big_nohaplotig	exon	9782117	9782249	100	-	.	Parent=FBgn0031842.1.mrna1;Target=FBgn0031842.1 2305 2437 +
ChrX	stalkie_big_nohaplotig	exon	9782988	9783418	100	-	.	Parent=FBgn0031842.1.mrna1;Target=FBgn0031842.1 1874 2304 +
ChrX	stalkie_big_nohaplotig	exon	9783491	9785362	99	-	.	Parent=FBgn0031842.1.mrna1;Target=FBgn0031842.1 1 1873 +
ChrX	stalkie_big_nohaplotig	CDS	9785287	9785360	.	-	0	Parent=FBgn0031842.1.mrna1
ChrX	gffcl	locus	9790672	9792475	.	+	.	ID=RLOC_00000514;geneIDs=FBgn0032713.1.path1;transcripts=FBgn0032713.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9790672	9792475	.	+	.	ID=FBgn0032713.1.mrna1;geneID=FBgn0032713.1.path1;Name=FBgn0032713.1;Dir=sensecoverage=100.0;identity=100.0;matches=1608;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000514
ChrX	stalkie_big_nohaplotig	exon	9790672	9790995	100	+	.	Parent=FBgn0032713.1.mrna1;Target=FBgn0032713.1 1 324 +
ChrX	stalkie_big_nohaplotig	exon	9791047	9791417	100	+	.	Parent=FBgn0032713.1.mrna1;Target=FBgn0032713.1 325 695 +
ChrX	stalkie_big_nohaplotig	exon	9791483	9792121	100	+	.	Parent=FBgn0032713.1.mrna1;Target=FBgn0032713.1 696 1334 +
ChrX	stalkie_big_nohaplotig	exon	9792202	9792475	100	+	.	Parent=FBgn0032713.1.mrna1;Target=FBgn0032713.1 1335 1608 +
ChrX	stalkie_big_nohaplotig	CDS	9790672	9790995	.	+	0	Parent=FBgn0032713.1.mrna1;Target=FBgn0032713.1 1 324 +
ChrX	stalkie_big_nohaplotig	CDS	9791047	9791417	.	+	0	Parent=FBgn0032713.1.mrna1;Target=FBgn0032713.1 325 695 +
ChrX	stalkie_big_nohaplotig	CDS	9791483	9792121	.	+	1	Parent=FBgn0032713.1.mrna1;Target=FBgn0032713.1 696 1334 +
ChrX	stalkie_big_nohaplotig	CDS	9792202	9792475	.	+	1	Parent=FBgn0032713.1.mrna1;Target=FBgn0032713.1 1335 1608 +
ChrX	gffcl	locus	9797681	9798558	.	+	.	ID=RLOC_00000515;geneIDs=comp58248_c0_seq1.path1;transcripts=comp58248_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9797681	9798558	.	+	.	ID=comp58248_c0_seq1.mrna1;geneID=comp58248_c0_seq1.path1;Name=comp58248_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=733;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000515
ChrX	stalkie_big_nohaplotig	exon	9797681	9798136	100	+	.	Parent=comp58248_c0_seq1.mrna1;Target=comp58248_c0_seq1 1 456 +
ChrX	stalkie_big_nohaplotig	exon	9798281	9798558	99	+	.	Parent=comp58248_c0_seq1.mrna1;Target=comp58248_c0_seq1 457 734 +
ChrX	stalkie_big_nohaplotig	CDS	9798064	9798136	.	+	0	Parent=comp58248_c0_seq1.mrna1;Target=comp58248_c0_seq1 384 456 +
ChrX	stalkie_big_nohaplotig	CDS	9798281	9798441	.	+	2	Parent=comp58248_c0_seq1.mrna1;Target=comp58248_c0_seq1 457 617 +
ChrX	gffcl	locus	9813949	9821715	.	.	.	ID=RLOC_00000517;geneIDs=FBgn0015808.1.path1,comp61108_c0_seq1.path1;transcripts=FBgn0015808.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9813949	9821715	.	-	.	ID=FBgn0015808.1.mrna1;geneID=FBgn0015808.1.path1;Name=FBgn0015808.1;Dir=sensecoverage=95.5;identity=99.7;matches=1581;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000517
ChrX	stalkie_big_nohaplotig	exon	9813949	9814136	100	-	.	Parent=FBgn0015808.1.mrna1;Target=FBgn0015808.1 1472 1659 +
ChrX	stalkie_big_nohaplotig	exon	9814200	9815077	99	-	.	Parent=FBgn0015808.1.mrna1;Target=FBgn0015808.1 594 1471 +
ChrX	stalkie_big_nohaplotig	exon	9821123	9821313	100	-	.	Parent=FBgn0015808.1.mrna1;Target=FBgn0015808.1 403 593 +
ChrX	stalkie_big_nohaplotig	exon	9821388	9821715	99	-	.	Parent=FBgn0015808.1.mrna1;Target=FBgn0015808.1 75 402 +
ChrX	stalkie_big_nohaplotig	CDS	9813949	9814136	.	-	2	Parent=FBgn0015808.1.mrna1;Target=FBgn0015808.1 1472 1659 +
ChrX	stalkie_big_nohaplotig	CDS	9814200	9815077	.	-	1	Parent=FBgn0015808.1.mrna1;Target=FBgn0015808.1 594 1471 +
ChrX	stalkie_big_nohaplotig	CDS	9821123	9821313	.	-	0	Parent=FBgn0015808.1.mrna1;Target=FBgn0015808.1 403 593 +
ChrX	stalkie_big_nohaplotig	CDS	9821388	9821714	.	-	0	Parent=FBgn0015808.1.mrna1;Target=FBgn0015808.1 76 402 +
ChrX	gffcl	locus	9817805	11816983	.	-	.	ID=RLOC_00000518;geneIDs=comp154447_c0_seq1.path1;transcripts=comp154447_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9817805	11816983	.	-	.	ID=comp154447_c0_seq1.mrna1;geneID=comp154447_c0_seq1.path1;Name=comp154447_c0_seq1;Dir=indeterminatecoverage=81.4;identity=94.9;matches=815;mismatches=35;indels=9;unknowns=0;Target=comp154447_c0_seq1 157 2 .;locus=RLOC_00000518
ChrX	stalkie_big_nohaplotig	exon	9817805	9818023	83	-	.	Parent=comp154447_c0_seq1.mrna1;Target=comp154447_c0_seq1 857 642 .
ChrX	stalkie_big_nohaplotig	exon	11816350	11816983	98	-	.	Parent=comp154447_c0_seq1.mrna1;Target=comp154447_c0_seq1 641 2 .
ChrX	stalkie_big_nohaplotig	CDS	11816828	11816983	.	-	0	Parent=comp154447_c0_seq1.mrna1
ChrX	gffcl	locus	9831653	9832482	.	+	.	ID=RLOC_00000519;geneIDs=comp135647_c0_seq1.path1;transcripts=comp135647_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9831653	9832482	.	+	.	ID=comp135647_c0_seq1.mrna1;geneID=comp135647_c0_seq1.path1;Name=comp135647_c0_seq1;Dir=sensecoverage=99.1;identity=99.9;matches=752;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000519
ChrX	stalkie_big_nohaplotig	exon	9831653	9832100	100	+	.	Parent=comp135647_c0_seq1.mrna1;Target=comp135647_c0_seq1 1 448 +
ChrX	stalkie_big_nohaplotig	exon	9832178	9832482	99	+	.	Parent=comp135647_c0_seq1.mrna1;Target=comp135647_c0_seq1 449 753 +
ChrX	stalkie_big_nohaplotig	CDS	9832001	9832100	.	+	0	Parent=comp135647_c0_seq1.mrna1;Target=comp135647_c0_seq1 349 448 +
ChrX	stalkie_big_nohaplotig	CDS	9832178	9832353	.	+	2	Parent=comp135647_c0_seq1.mrna1;Target=comp135647_c0_seq1 449 624 +
ChrX	gffcl	locus	9834513	9850836	.	-	.	ID=RLOC_00000520;geneIDs=FBgn0000721.1.path1;transcripts=FBgn0000721.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9834513	9850836	.	-	.	ID=FBgn0000721.1.mrna1;geneID=FBgn0000721.1.path1;Name=FBgn0000721.1;Dir=sensecoverage=100.0;identity=99.9;matches=3221;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000520
ChrX	stalkie_big_nohaplotig	exon	9834513	9834675	100	-	.	Parent=FBgn0000721.1.mrna1;Target=FBgn0000721.1 3063 3225 +
ChrX	stalkie_big_nohaplotig	exon	9834768	9834957	100	-	.	Parent=FBgn0000721.1.mrna1;Target=FBgn0000721.1 2873 3062 +
ChrX	stalkie_big_nohaplotig	exon	9835020	9835639	100	-	.	Parent=FBgn0000721.1.mrna1;Target=FBgn0000721.1 2253 2872 +
ChrX	stalkie_big_nohaplotig	exon	9835710	9835859	100	-	.	Parent=FBgn0000721.1.mrna1;Target=FBgn0000721.1 2103 2252 +
ChrX	stalkie_big_nohaplotig	exon	9835924	9836160	100	-	.	Parent=FBgn0000721.1.mrna1;Target=FBgn0000721.1 1866 2102 +
ChrX	stalkie_big_nohaplotig	exon	9838721	9838940	100	-	.	Parent=FBgn0000721.1.mrna1;Target=FBgn0000721.1 1646 1865 +
ChrX	stalkie_big_nohaplotig	exon	9848051	9848217	100	-	.	Parent=FBgn0000721.1.mrna1;Target=FBgn0000721.1 1479 1645 +
ChrX	stalkie_big_nohaplotig	exon	9849290	9849596	100	-	.	Parent=FBgn0000721.1.mrna1;Target=FBgn0000721.1 1172 1478 +
ChrX	stalkie_big_nohaplotig	exon	9849666	9850836	99	-	.	Parent=FBgn0000721.1.mrna1;Target=FBgn0000721.1 1 1171 +
ChrX	stalkie_big_nohaplotig	CDS	9834513	9834675	.	-	1	Parent=FBgn0000721.1.mrna1;Target=FBgn0000721.1 3063 3225 +
ChrX	stalkie_big_nohaplotig	CDS	9834768	9834957	.	-	2	Parent=FBgn0000721.1.mrna1;Target=FBgn0000721.1 2873 3062 +
ChrX	stalkie_big_nohaplotig	CDS	9835020	9835639	.	-	1	Parent=FBgn0000721.1.mrna1;Target=FBgn0000721.1 2253 2872 +
ChrX	stalkie_big_nohaplotig	CDS	9835710	9835859	.	-	1	Parent=FBgn0000721.1.mrna1;Target=FBgn0000721.1 2103 2252 +
ChrX	stalkie_big_nohaplotig	CDS	9835924	9836160	.	-	1	Parent=FBgn0000721.1.mrna1;Target=FBgn0000721.1 1866 2102 +
ChrX	stalkie_big_nohaplotig	CDS	9838721	9838940	.	-	2	Parent=FBgn0000721.1.mrna1;Target=FBgn0000721.1 1646 1865 +
ChrX	stalkie_big_nohaplotig	CDS	9848051	9848217	.	-	1	Parent=FBgn0000721.1.mrna1;Target=FBgn0000721.1 1479 1645 +
ChrX	stalkie_big_nohaplotig	CDS	9849290	9849596	.	-	2	Parent=FBgn0000721.1.mrna1;Target=FBgn0000721.1 1172 1478 +
ChrX	stalkie_big_nohaplotig	CDS	9849666	9850836	.	-	0	Parent=FBgn0000721.1.mrna1;Target=FBgn0000721.1 1 1171 +
ChrX	gffcl	locus	9961879	9962317	.	-	.	ID=RLOC_00000522;geneIDs=FBgn0031560.1.path1;transcripts=FBgn0031560.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9961879	9962317	.	-	.	ID=FBgn0031560.1.mrna1;geneID=FBgn0031560.1.path1;Name=FBgn0031560.1;Dir=sensecoverage=100.0;identity=99.7;matches=302;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000522
ChrX	stalkie_big_nohaplotig	exon	9961879	9962060	100	-	.	Parent=FBgn0031560.1.mrna1;Target=FBgn0031560.1 122 303 +
ChrX	stalkie_big_nohaplotig	exon	9962197	9962317	99	-	.	Parent=FBgn0031560.1.mrna1;Target=FBgn0031560.1 1 121 +
ChrX	stalkie_big_nohaplotig	CDS	9961879	9962060	.	-	2	Parent=FBgn0031560.1.mrna1;Target=FBgn0031560.1 122 303 +
ChrX	stalkie_big_nohaplotig	CDS	9962197	9962317	.	-	0	Parent=FBgn0031560.1.mrna1;Target=FBgn0031560.1 1 121 +
ChrX	gffcl	locus	9969035	9969580	.	+	.	ID=RLOC_00000523;geneIDs=comp172455_c0_seq1.path1;transcripts=comp172455_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9969035	9969580	.	+	.	ID=comp172455_c0_seq1.mrna1;geneID=comp172455_c0_seq1.path1;Name=comp172455_c0_seq1;Dir=antisensecoverage=100.0;identity=99.2;matches=467;mismatches=1;indels=3;unknowns=0;locus=RLOC_00000523
ChrX	stalkie_big_nohaplotig	exon	9969035	9969202	100	+	.	Parent=comp172455_c0_seq1.mrna1;Target=comp172455_c0_seq1 301 468 -
ChrX	stalkie_big_nohaplotig	exon	9969278	9969580	98	+	.	Parent=comp172455_c0_seq1.mrna1;Target=comp172455_c0_seq1 1 300 -
ChrX	stalkie_big_nohaplotig	CDS	9969100	9969202	.	+	0	Parent=comp172455_c0_seq1.mrna1;Target=comp172455_c0_seq1 301 403 .
ChrX	stalkie_big_nohaplotig	CDS	9969278	9969486	.	+	2	Parent=comp172455_c0_seq1.mrna1;Target=comp172455_c0_seq1 92 300 .
ChrX	gffcl	locus	9970260	9970695	.	+	.	ID=RLOC_00000524;geneIDs=FBgn0031562.1.path1;transcripts=FBgn0031562.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9970260	9970695	.	+	.	ID=FBgn0031562.1.mrna1;geneID=FBgn0031562.1.path1;Name=FBgn0031562.1;Dir=sensecoverage=100.0;identity=100.0;matches=363;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000524
ChrX	stalkie_big_nohaplotig	exon	9970260	9970440	100	+	.	Parent=FBgn0031562.1.mrna1;Target=FBgn0031562.1 1 181 +
ChrX	stalkie_big_nohaplotig	exon	9970514	9970695	100	+	.	Parent=FBgn0031562.1.mrna1;Target=FBgn0031562.1 182 363 +
ChrX	stalkie_big_nohaplotig	CDS	9970260	9970440	.	+	0	Parent=FBgn0031562.1.mrna1;Target=FBgn0031562.1 1 181 +
ChrX	stalkie_big_nohaplotig	CDS	9970514	9970695	.	+	2	Parent=FBgn0031562.1.mrna1;Target=FBgn0031562.1 182 363 +
ChrX	gffcl	locus	9978144	9978682	.	-	.	ID=RLOC_00000525;geneIDs=FBgn0051777.1.path1;transcripts=FBgn0051777.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9978144	9978682	.	-	.	ID=FBgn0051777.1.mrna1;geneID=FBgn0051777.1.path1;Name=FBgn0051777.1;Dir=sensecoverage=100.0;identity=100.0;matches=348;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000525
ChrX	stalkie_big_nohaplotig	exon	9978144	9978352	100	-	.	Parent=FBgn0051777.1.mrna1;Target=FBgn0051777.1 140 348 +
ChrX	stalkie_big_nohaplotig	exon	9978544	9978682	100	-	.	Parent=FBgn0051777.1.mrna1;Target=FBgn0051777.1 1 139 +
ChrX	stalkie_big_nohaplotig	CDS	9978144	9978352	.	-	2	Parent=FBgn0051777.1.mrna1;Target=FBgn0051777.1 140 348 +
ChrX	stalkie_big_nohaplotig	CDS	9978544	9978682	.	-	0	Parent=FBgn0051777.1.mrna1;Target=FBgn0051777.1 1 139 +
ChrX	gffcl	locus	9981683	9996172	.	-	.	ID=RLOC_00000526;geneIDs=FBgn0015376.1.path1;transcripts=FBgn0015376.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9981683	9996172	.	-	.	ID=FBgn0015376.1.mrna1;geneID=FBgn0015376.1.path1;Name=FBgn0015376.1;Dir=sensecoverage=100.0;identity=99.9;matches=2852;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000526
ChrX	stalkie_big_nohaplotig	exon	9981683	9981780	100	-	.	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 2759 2856 +
ChrX	stalkie_big_nohaplotig	exon	9981849	9981909	98	-	.	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 2698 2758 +
ChrX	stalkie_big_nohaplotig	exon	9985650	9985837	98	-	.	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 2510 2697 +
ChrX	stalkie_big_nohaplotig	exon	9985895	9986028	100	-	.	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 2376 2509 +
ChrX	stalkie_big_nohaplotig	exon	9986082	9986257	100	-	.	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 2200 2375 +
ChrX	stalkie_big_nohaplotig	exon	9993494	9993728	100	-	.	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 1965 2199 +
ChrX	stalkie_big_nohaplotig	exon	9993784	9993920	100	-	.	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 1828 1964 +
ChrX	stalkie_big_nohaplotig	exon	9993984	9994086	100	-	.	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 1725 1827 +
ChrX	stalkie_big_nohaplotig	exon	9994146	9994262	100	-	.	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 1608 1724 +
ChrX	stalkie_big_nohaplotig	exon	9994343	9994571	100	-	.	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 1379 1607 +
ChrX	stalkie_big_nohaplotig	exon	9994625	9994983	100	-	.	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 1020 1378 +
ChrX	stalkie_big_nohaplotig	exon	9995033	9995229	100	-	.	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 823 1019 +
ChrX	stalkie_big_nohaplotig	exon	9995289	9995980	99	-	.	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 131 822 +
ChrX	stalkie_big_nohaplotig	exon	9996043	9996172	100	-	.	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 1 130 +
ChrX	stalkie_big_nohaplotig	CDS	9981683	9981780	.	-	2	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 2759 2856 +
ChrX	stalkie_big_nohaplotig	CDS	9981849	9981909	.	-	0	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 2698 2758 +
ChrX	stalkie_big_nohaplotig	CDS	9985650	9985837	.	-	2	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 2510 2697 +
ChrX	stalkie_big_nohaplotig	CDS	9985895	9986028	.	-	1	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 2376 2509 +
ChrX	stalkie_big_nohaplotig	CDS	9986082	9986257	.	-	0	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 2200 2375 +
ChrX	stalkie_big_nohaplotig	CDS	9993494	9993728	.	-	1	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 1965 2199 +
ChrX	stalkie_big_nohaplotig	CDS	9993784	9993920	.	-	0	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 1828 1964 +
ChrX	stalkie_big_nohaplotig	CDS	9993984	9994086	.	-	1	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 1725 1827 +
ChrX	stalkie_big_nohaplotig	CDS	9994146	9994262	.	-	1	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 1608 1724 +
ChrX	stalkie_big_nohaplotig	CDS	9994343	9994571	.	-	2	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 1379 1607 +
ChrX	stalkie_big_nohaplotig	CDS	9994625	9994983	.	-	1	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 1020 1378 +
ChrX	stalkie_big_nohaplotig	CDS	9995033	9995229	.	-	0	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 823 1019 +
ChrX	stalkie_big_nohaplotig	CDS	9995289	9995980	.	-	2	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 131 822 +
ChrX	stalkie_big_nohaplotig	CDS	9996043	9996172	.	-	0	Parent=FBgn0015376.1.mrna1;Target=FBgn0015376.1 1 130 +
ChrX	gffcl	locus	9998430	10000746	.	+	.	ID=RLOC_00000527;geneIDs=FBgn0031566.1.path1;transcripts=FBgn0031566.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	9998430	10000746	.	+	.	ID=FBgn0031566.1.mrna1;geneID=FBgn0031566.1.path1;Name=FBgn0031566.1;Dir=sensecoverage=100.0;identity=99.8;matches=2121;mismatches=5;indels=0;unknowns=0;locus=RLOC_00000527
ChrX	stalkie_big_nohaplotig	exon	9998430	9998693	100	+	.	Parent=FBgn0031566.1.mrna1;Target=FBgn0031566.1 2 265 +
ChrX	stalkie_big_nohaplotig	exon	9998751	9999856	99	+	.	Parent=FBgn0031566.1.mrna1;Target=FBgn0031566.1 266 1371 +
ChrX	stalkie_big_nohaplotig	exon	9999916	10000539	99	+	.	Parent=FBgn0031566.1.mrna1;Target=FBgn0031566.1 1372 1995 +
ChrX	stalkie_big_nohaplotig	exon	10000615	10000746	100	+	.	Parent=FBgn0031566.1.mrna1;Target=FBgn0031566.1 1996 2127 +
ChrX	stalkie_big_nohaplotig	CDS	9998432	9998693	.	+	0	Parent=FBgn0031566.1.mrna1;Target=FBgn0031566.1 4 265 +
ChrX	stalkie_big_nohaplotig	CDS	9998751	9999856	.	+	2	Parent=FBgn0031566.1.mrna1;Target=FBgn0031566.1 266 1371 +
ChrX	stalkie_big_nohaplotig	CDS	9999916	10000539	.	+	0	Parent=FBgn0031566.1.mrna1;Target=FBgn0031566.1 1372 1995 +
ChrX	stalkie_big_nohaplotig	CDS	10000615	10000746	.	+	0	Parent=FBgn0031566.1.mrna1;Target=FBgn0031566.1 1996 2127 +
ChrX	gffcl	locus	10003019	10019260	.	+	.	ID=RLOC_00000528;geneIDs=FBgn0003386.1.path1,comp155347_c0_seq1.path1;transcripts=comp155347_c0_seq1.mrna1,FBgn0003386.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10003019	10019260	.	+	.	ID=comp155347_c0_seq1.mrna1;geneID=comp155347_c0_seq1.path1;Name=comp155347_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=3517;mismatches=2;indels=7;unknowns=0;locus=RLOC_00000528
ChrX	stalkie_big_nohaplotig	exon	10003019	10003597	98	+	.	Parent=comp155347_c0_seq1.mrna1;Target=comp155347_c0_seq1 1 586 +
ChrX	stalkie_big_nohaplotig	exon	10007376	10007967	100	+	.	Parent=comp155347_c0_seq1.mrna1;Target=comp155347_c0_seq1 587 1178 +
ChrX	stalkie_big_nohaplotig	exon	10008041	10008158	100	+	.	Parent=comp155347_c0_seq1.mrna1;Target=comp155347_c0_seq1 1179 1296 +
ChrX	stalkie_big_nohaplotig	exon	10009331	10009525	100	+	.	Parent=comp155347_c0_seq1.mrna1;Target=comp155347_c0_seq1 1297 1491 +
ChrX	stalkie_big_nohaplotig	exon	10009580	10009798	100	+	.	Parent=comp155347_c0_seq1.mrna1;Target=comp155347_c0_seq1 1492 1710 +
ChrX	stalkie_big_nohaplotig	exon	10010290	10010893	100	+	.	Parent=comp155347_c0_seq1.mrna1;Target=comp155347_c0_seq1 1711 2314 +
ChrX	stalkie_big_nohaplotig	exon	10010966	10011094	100	+	.	Parent=comp155347_c0_seq1.mrna1;Target=comp155347_c0_seq1 2315 2443 +
ChrX	stalkie_big_nohaplotig	exon	10012270	10012977	100	+	.	Parent=comp155347_c0_seq1.mrna1;Target=comp155347_c0_seq1 2444 3151 +
ChrX	stalkie_big_nohaplotig	exon	10018886	10019260	99	+	.	Parent=comp155347_c0_seq1.mrna1;Target=comp155347_c0_seq1 3152 3526 +
ChrX	stalkie_big_nohaplotig	CDS	10007711	10007967	.	+	0	Parent=comp155347_c0_seq1.mrna1;Target=comp155347_c0_seq1 922 1178 +
ChrX	stalkie_big_nohaplotig	CDS	10008041	10008158	.	+	1	Parent=comp155347_c0_seq1.mrna1;Target=comp155347_c0_seq1 1179 1296 +
ChrX	stalkie_big_nohaplotig	CDS	10009331	10009525	.	+	0	Parent=comp155347_c0_seq1.mrna1;Target=comp155347_c0_seq1 1297 1491 +
ChrX	stalkie_big_nohaplotig	CDS	10009580	10009798	.	+	0	Parent=comp155347_c0_seq1.mrna1;Target=comp155347_c0_seq1 1492 1710 +
ChrX	stalkie_big_nohaplotig	CDS	10010290	10010893	.	+	0	Parent=comp155347_c0_seq1.mrna1;Target=comp155347_c0_seq1 1711 2314 +
ChrX	stalkie_big_nohaplotig	CDS	10010966	10011094	.	+	2	Parent=comp155347_c0_seq1.mrna1;Target=comp155347_c0_seq1 2315 2443 +
ChrX	stalkie_big_nohaplotig	CDS	10012270	10012328	.	+	2	Parent=comp155347_c0_seq1.mrna1;Target=comp155347_c0_seq1 2444 2502 +
ChrX	stalkie_big_nohaplotig	mRNA	10007657	10019055	.	+	.	ID=FBgn0003386.1.mrna1;geneID=FBgn0003386.1.path1;Name=FBgn0003386.1;Dir=sensecoverage=100.0;identity=100.0;matches=1746;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000528
ChrX	stalkie_big_nohaplotig	exon	10007657	10007967	100	+	.	Parent=FBgn0003386.1.mrna1;Target=FBgn0003386.1 1 311 +
ChrX	stalkie_big_nohaplotig	exon	10008041	10008158	100	+	.	Parent=FBgn0003386.1.mrna1;Target=FBgn0003386.1 312 429 +
ChrX	stalkie_big_nohaplotig	exon	10009331	10009525	100	+	.	Parent=FBgn0003386.1.mrna1;Target=FBgn0003386.1 430 624 +
ChrX	stalkie_big_nohaplotig	exon	10009580	10009798	100	+	.	Parent=FBgn0003386.1.mrna1;Target=FBgn0003386.1 625 843 +
ChrX	stalkie_big_nohaplotig	exon	10010290	10010893	100	+	.	Parent=FBgn0003386.1.mrna1;Target=FBgn0003386.1 844 1447 +
ChrX	stalkie_big_nohaplotig	exon	10010966	10011094	100	+	.	Parent=FBgn0003386.1.mrna1;Target=FBgn0003386.1 1448 1576 +
ChrX	stalkie_big_nohaplotig	exon	10018886	10019055	100	+	.	Parent=FBgn0003386.1.mrna1;Target=FBgn0003386.1 1577 1746 +
ChrX	stalkie_big_nohaplotig	CDS	10007657	10007967	.	+	0	Parent=FBgn0003386.1.mrna1;Target=FBgn0003386.1 1 311 +
ChrX	stalkie_big_nohaplotig	CDS	10008041	10008158	.	+	1	Parent=FBgn0003386.1.mrna1;Target=FBgn0003386.1 312 429 +
ChrX	stalkie_big_nohaplotig	CDS	10009331	10009525	.	+	0	Parent=FBgn0003386.1.mrna1;Target=FBgn0003386.1 430 624 +
ChrX	stalkie_big_nohaplotig	CDS	10009580	10009798	.	+	0	Parent=FBgn0003386.1.mrna1;Target=FBgn0003386.1 625 843 +
ChrX	stalkie_big_nohaplotig	CDS	10010290	10010893	.	+	0	Parent=FBgn0003386.1.mrna1;Target=FBgn0003386.1 844 1447 +
ChrX	stalkie_big_nohaplotig	CDS	10010966	10011094	.	+	2	Parent=FBgn0003386.1.mrna1;Target=FBgn0003386.1 1448 1576 +
ChrX	stalkie_big_nohaplotig	CDS	10018886	10019055	.	+	2	Parent=FBgn0003386.1.mrna1;Target=FBgn0003386.1 1577 1746 +
ChrX	gffcl	locus	10016777	10018109	.	+	.	ID=RLOC_00000529;geneIDs=comp147677_c1_seq1.path1;transcripts=comp147677_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10016777	10018109	.	+	.	ID=comp147677_c1_seq1.mrna1;geneID=comp147677_c1_seq1.path1;Name=comp147677_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=1331;mismatches=2;indels=19;unknowns=0;Target=comp147677_c1_seq1 1352 1 .;CDS_Target=comp147677_c1_seq1 197 3 .;locus=RLOC_00000529
ChrX	stalkie_big_nohaplotig	exon	10016777	10018109	98	+	.	Parent=comp147677_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10016779	10016973	.	+	0	Parent=comp147677_c1_seq1.mrna1
ChrX	gffcl	locus	10019278	10020443	.	-	.	ID=RLOC_00000530;geneIDs=comp152403_c0_seq1.path1;transcripts=comp152403_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10019278	10020443	.	-	.	ID=comp152403_c0_seq1.mrna1;geneID=comp152403_c0_seq1.path1;Name=comp152403_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1159;mismatches=6;indels=2;unknowns=0;Target=comp152403_c0_seq1 1166 1 .;CDS_Target=comp152403_c0_seq1 122 3 .;locus=RLOC_00000530
ChrX	stalkie_big_nohaplotig	exon	10019278	10020443	99	-	.	Parent=comp152403_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10020322	10020441	.	-	0	Parent=comp152403_c0_seq1.mrna1
ChrX	gffcl	locus	10028663	10033926	.	.	.	ID=RLOC_00000531;geneIDs=FBgn0031568.1.path1,comp143833_c0_seq1.path1;transcripts=FBgn0031568.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10030220	10033926	.	+	.	ID=FBgn0031568.1.mrna1;geneID=FBgn0031568.1.path1;Name=FBgn0031568.1;Dir=sensecoverage=100.0;identity=99.5;matches=2695;mismatches=2;indels=12;unknowns=0;locus=RLOC_00000531
ChrX	stalkie_big_nohaplotig	exon	10030220	10030751	98	+	.	Parent=FBgn0031568.1.mrna1;Target=FBgn0031568.1 1 526 +
ChrX	stalkie_big_nohaplotig	exon	10030898	10031034	100	+	.	Parent=FBgn0031568.1.mrna1;Target=FBgn0031568.1 527 663 +
ChrX	stalkie_big_nohaplotig	exon	10031085	10031400	99	+	.	Parent=FBgn0031568.1.mrna1;Target=FBgn0031568.1 664 979 +
ChrX	stalkie_big_nohaplotig	exon	10031471	10031630	99	+	.	Parent=FBgn0031568.1.mrna1;Target=FBgn0031568.1 980 1139 +
ChrX	stalkie_big_nohaplotig	exon	10031712	10031853	100	+	.	Parent=FBgn0031568.1.mrna1;Target=FBgn0031568.1 1140 1281 +
ChrX	stalkie_big_nohaplotig	exon	10032065	10032220	100	+	.	Parent=FBgn0031568.1.mrna1;Target=FBgn0031568.1 1282 1437 +
ChrX	stalkie_big_nohaplotig	exon	10032336	10032497	100	+	.	Parent=FBgn0031568.1.mrna1;Target=FBgn0031568.1 1438 1599 +
ChrX	stalkie_big_nohaplotig	exon	10032556	10032727	100	+	.	Parent=FBgn0031568.1.mrna1;Target=FBgn0031568.1 1600 1771 +
ChrX	stalkie_big_nohaplotig	exon	10032940	10033558	100	+	.	Parent=FBgn0031568.1.mrna1;Target=FBgn0031568.1 1772 2390 +
ChrX	stalkie_big_nohaplotig	exon	10033620	10033926	98	+	.	Parent=FBgn0031568.1.mrna1;Target=FBgn0031568.1 2391 2703 +
ChrX	stalkie_big_nohaplotig	CDS	10030220	10030751	.	+	0	Parent=FBgn0031568.1.mrna1;Target=FBgn0031568.1 1 526 +
ChrX	stalkie_big_nohaplotig	CDS	10030898	10031034	.	+	2	Parent=FBgn0031568.1.mrna1;Target=FBgn0031568.1 527 663 +
ChrX	stalkie_big_nohaplotig	CDS	10031085	10031400	.	+	0	Parent=FBgn0031568.1.mrna1;Target=FBgn0031568.1 664 979 +
ChrX	stalkie_big_nohaplotig	CDS	10031471	10031630	.	+	2	Parent=FBgn0031568.1.mrna1;Target=FBgn0031568.1 980 1139 +
ChrX	stalkie_big_nohaplotig	CDS	10031712	10031853	.	+	1	Parent=FBgn0031568.1.mrna1;Target=FBgn0031568.1 1140 1281 +
ChrX	stalkie_big_nohaplotig	CDS	10032065	10032220	.	+	0	Parent=FBgn0031568.1.mrna1;Target=FBgn0031568.1 1282 1437 +
ChrX	stalkie_big_nohaplotig	CDS	10032336	10032497	.	+	0	Parent=FBgn0031568.1.mrna1;Target=FBgn0031568.1 1438 1599 +
ChrX	stalkie_big_nohaplotig	CDS	10032556	10032727	.	+	0	Parent=FBgn0031568.1.mrna1;Target=FBgn0031568.1 1600 1771 +
ChrX	stalkie_big_nohaplotig	CDS	10032940	10033558	.	+	2	Parent=FBgn0031568.1.mrna1;Target=FBgn0031568.1 1772 2390 +
ChrX	stalkie_big_nohaplotig	CDS	10033620	10033926	.	+	1	Parent=FBgn0031568.1.mrna1;Target=FBgn0031568.1 2391 2703 +
ChrX	gffcl	locus	10037682	10052920	.	+	.	ID=RLOC_00000532;geneIDs=FBgn0263846.1.path1,comp159822_c1_seq1.path1;transcripts=comp159822_c1_seq1.mrna1,FBgn0263846.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10037682	10052920	.	+	.	ID=comp159822_c1_seq1.mrna1;geneID=comp159822_c1_seq1.path1;Name=comp159822_c1_seq1;Dir=sensecoverage=99.9;identity=100.0;matches=6391;mismatches=2;indels=1;unknowns=0;locus=RLOC_00000532
ChrX	stalkie_big_nohaplotig	exon	10037682	10038046	100	+	.	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 5 369 +
ChrX	stalkie_big_nohaplotig	exon	10038442	10038488	100	+	.	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 370 416 +
ChrX	stalkie_big_nohaplotig	exon	10038555	10038692	100	+	.	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 417 554 +
ChrX	stalkie_big_nohaplotig	exon	10038750	10038922	100	+	.	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 555 727 +
ChrX	stalkie_big_nohaplotig	exon	10039023	10039226	99	+	.	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 728 932 +
ChrX	stalkie_big_nohaplotig	exon	10040651	10040719	100	+	.	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 933 1001 +
ChrX	stalkie_big_nohaplotig	exon	10040794	10041379	100	+	.	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 1002 1587 +
ChrX	stalkie_big_nohaplotig	exon	10041446	10041579	100	+	.	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 1588 1721 +
ChrX	stalkie_big_nohaplotig	exon	10041642	10043007	100	+	.	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 1722 3087 +
ChrX	stalkie_big_nohaplotig	exon	10043132	10043397	100	+	.	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 3088 3353 +
ChrX	stalkie_big_nohaplotig	exon	10043465	10043634	100	+	.	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 3354 3523 +
ChrX	stalkie_big_nohaplotig	exon	10045637	10046898	99	+	.	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 3524 4785 +
ChrX	stalkie_big_nohaplotig	exon	10046959	10047154	100	+	.	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 4786 4981 +
ChrX	stalkie_big_nohaplotig	exon	10047228	10047362	100	+	.	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 4982 5116 +
ChrX	stalkie_big_nohaplotig	exon	10050324	10050736	100	+	.	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 5117 5529 +
ChrX	stalkie_big_nohaplotig	exon	10050799	10051004	99	+	.	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 5530 5735 +
ChrX	stalkie_big_nohaplotig	exon	10051077	10051240	100	+	.	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 5736 5899 +
ChrX	stalkie_big_nohaplotig	exon	10051301	10051442	100	+	.	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 5900 6041 +
ChrX	stalkie_big_nohaplotig	exon	10052564	10052920	100	+	.	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 6042 6398 +
ChrX	stalkie_big_nohaplotig	CDS	10038022	10038046	.	+	0	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 345 369 +
ChrX	stalkie_big_nohaplotig	CDS	10038442	10038488	.	+	2	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 370 416 +
ChrX	stalkie_big_nohaplotig	CDS	10038555	10038692	.	+	0	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 417 554 +
ChrX	stalkie_big_nohaplotig	CDS	10038750	10038922	.	+	0	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 555 727 +
ChrX	stalkie_big_nohaplotig	CDS	10039023	10039220	.	+	1	Parent=comp159822_c1_seq1.mrna1;Target=comp159822_c1_seq1 728 926 +
ChrX	stalkie_big_nohaplotig	mRNA	10039142	10052612	.	+	.	ID=FBgn0263846.1.mrna1;geneID=FBgn0263846.1.path1;Name=FBgn0263846.1;Dir=sensecoverage=100.0;identity=99.9;matches=5187;mismatches=2;indels=1;unknowns=0;Target=FBgn0263846.1 3 80 +;locus=RLOC_00000532
ChrX	stalkie_big_nohaplotig	exon	10039142	10039226	98	+	.	Parent=FBgn0263846.1.mrna1;Target=FBgn0263846.1 1 86 +
ChrX	stalkie_big_nohaplotig	exon	10040651	10040719	100	+	.	Parent=FBgn0263846.1.mrna1;Target=FBgn0263846.1 87 155 +
ChrX	stalkie_big_nohaplotig	exon	10040794	10041379	100	+	.	Parent=FBgn0263846.1.mrna1;Target=FBgn0263846.1 156 741 +
ChrX	stalkie_big_nohaplotig	exon	10041446	10041579	100	+	.	Parent=FBgn0263846.1.mrna1;Target=FBgn0263846.1 742 875 +
ChrX	stalkie_big_nohaplotig	exon	10041642	10043007	100	+	.	Parent=FBgn0263846.1.mrna1;Target=FBgn0263846.1 876 2241 +
ChrX	stalkie_big_nohaplotig	exon	10043132	10043397	100	+	.	Parent=FBgn0263846.1.mrna1;Target=FBgn0263846.1 2242 2507 +
ChrX	stalkie_big_nohaplotig	exon	10043465	10043580	100	+	.	Parent=FBgn0263846.1.mrna1;Target=FBgn0263846.1 2508 2623 +
ChrX	stalkie_big_nohaplotig	exon	10045637	10046898	99	+	.	Parent=FBgn0263846.1.mrna1;Target=FBgn0263846.1 2624 3885 +
ChrX	stalkie_big_nohaplotig	exon	10046959	10047154	100	+	.	Parent=FBgn0263846.1.mrna1;Target=FBgn0263846.1 3886 4081 +
ChrX	stalkie_big_nohaplotig	exon	10047228	10047362	100	+	.	Parent=FBgn0263846.1.mrna1;Target=FBgn0263846.1 4082 4216 +
ChrX	stalkie_big_nohaplotig	exon	10050324	10050736	100	+	.	Parent=FBgn0263846.1.mrna1;Target=FBgn0263846.1 4217 4629 +
ChrX	stalkie_big_nohaplotig	exon	10050799	10051004	99	+	.	Parent=FBgn0263846.1.mrna1;Target=FBgn0263846.1 4630 4835 +
ChrX	stalkie_big_nohaplotig	exon	10051077	10051240	100	+	.	Parent=FBgn0263846.1.mrna1;Target=FBgn0263846.1 4836 4999 +
ChrX	stalkie_big_nohaplotig	exon	10051301	10051442	100	+	.	Parent=FBgn0263846.1.mrna1;Target=FBgn0263846.1 5000 5141 +
ChrX	stalkie_big_nohaplotig	exon	10052564	10052612	100	+	.	Parent=FBgn0263846.1.mrna1;Target=FBgn0263846.1 5142 5190 +
ChrX	stalkie_big_nohaplotig	CDS	10039144	10039220	.	+	0	Parent=FBgn0263846.1.mrna1
ChrX	gffcl	locus	10065090	10066652	.	+	.	ID=RLOC_00000533;geneIDs=FBgn0004893.1.path1;transcripts=FBgn0004893.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10065090	10066652	.	+	.	ID=FBgn0004893.1.mrna1;geneID=FBgn0004893.1.path1;Name=FBgn0004893.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1557;mismatches=6;indels=0;unknowns=0;Target=FBgn0004893.1 1563 1 .;locus=RLOC_00000533
ChrX	stalkie_big_nohaplotig	exon	10065090	10066652	99	+	.	Parent=FBgn0004893.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10065090	10066652	.	+	0	Parent=FBgn0004893.1.mrna1
ChrX	gffcl	locus	10068399	10069304	.	+	.	ID=RLOC_00000534;geneIDs=comp151064_c0_seq1.path1;transcripts=comp151064_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10068399	10069304	.	+	.	ID=comp151064_c0_seq1.mrna1;geneID=comp151064_c0_seq1.path1;Name=comp151064_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.3;matches=900;mismatches=6;indels=0;unknowns=0;Target=comp151064_c0_seq1 907 2 .;CDS_Target=comp151064_c0_seq1 133 2 .;locus=RLOC_00000534
ChrX	stalkie_big_nohaplotig	exon	10068399	10069304	99	+	.	Parent=comp151064_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10068399	10068530	.	+	0	Parent=comp151064_c0_seq1.mrna1
ChrX	gffcl	locus	10073759	10079566	.	+	.	ID=RLOC_00000535;geneIDs=comp142086_c0_seq1.path1;transcripts=comp142086_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10073759	10079566	.	+	.	ID=comp142086_c0_seq1.mrna1;geneID=comp142086_c0_seq1.path1;Name=comp142086_c0_seq1;Dir=sensecoverage=97.1;identity=96.7;matches=498;mismatches=1;indels=16;unknowns=0;Target=comp142086_c0_seq1 3 146 +;locus=RLOC_00000535
ChrX	stalkie_big_nohaplotig	exon	10073759	10074019	94	+	.	Parent=comp142086_c0_seq1.mrna1;Target=comp142086_c0_seq1 1 261 +
ChrX	stalkie_big_nohaplotig	exon	10079321	10079566	99	+	.	Parent=comp142086_c0_seq1.mrna1;Target=comp142086_c0_seq1 262 507 +
ChrX	stalkie_big_nohaplotig	CDS	10073761	10073904	.	+	0	Parent=comp142086_c0_seq1.mrna1
ChrX	gffcl	locus	10079747	10094815	.	+	.	ID=RLOC_00000536;geneIDs=FBgn0031571.1.path1;transcripts=FBgn0031571.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10079747	10094815	.	+	.	ID=FBgn0031571.1.mrna1;geneID=FBgn0031571.1.path1;Name=FBgn0031571.1;Dir=sensecoverage=100.0;identity=99.7;matches=8544;mismatches=17;indels=13;unknowns=0;locus=RLOC_00000536
ChrX	stalkie_big_nohaplotig	exon	10079747	10080355	100	+	.	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 1 609 +
ChrX	stalkie_big_nohaplotig	exon	10085094	10085272	99	+	.	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 610 788 +
ChrX	stalkie_big_nohaplotig	exon	10085643	10091935	99	+	.	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 789 7081 +
ChrX	stalkie_big_nohaplotig	exon	10092001	10092212	100	+	.	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 7082 7293 +
ChrX	stalkie_big_nohaplotig	exon	10092729	10093084	100	+	.	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 7294 7649 +
ChrX	stalkie_big_nohaplotig	exon	10093148	10093273	99	+	.	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 7650 7775 +
ChrX	stalkie_big_nohaplotig	exon	10093438	10093461	100	+	.	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 7776 7799 +
ChrX	stalkie_big_nohaplotig	exon	10093531	10093628	100	+	.	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 7800 7897 +
ChrX	stalkie_big_nohaplotig	exon	10093698	10093941	99	+	.	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 7898 8141 +
ChrX	stalkie_big_nohaplotig	exon	10094019	10094145	100	+	.	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 8142 8268 +
ChrX	stalkie_big_nohaplotig	exon	10094436	10094657	100	+	.	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 8269 8490 +
ChrX	stalkie_big_nohaplotig	exon	10094739	10094815	98	+	.	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 8491 8568 +
ChrX	stalkie_big_nohaplotig	CDS	10079747	10080355	.	+	0	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 1 609 +
ChrX	stalkie_big_nohaplotig	CDS	10085094	10085272	.	+	0	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 610 788 +
ChrX	stalkie_big_nohaplotig	CDS	10085643	10091935	.	+	1	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 789 7081 +
ChrX	stalkie_big_nohaplotig	CDS	10092001	10092212	.	+	2	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 7082 7293 +
ChrX	stalkie_big_nohaplotig	CDS	10092729	10093084	.	+	0	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 7294 7649 +
ChrX	stalkie_big_nohaplotig	CDS	10093148	10093273	.	+	1	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 7650 7775 +
ChrX	stalkie_big_nohaplotig	CDS	10093438	10093461	.	+	1	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 7776 7799 +
ChrX	stalkie_big_nohaplotig	CDS	10093531	10093628	.	+	1	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 7800 7897 +
ChrX	stalkie_big_nohaplotig	CDS	10093698	10093941	.	+	2	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 7898 8141 +
ChrX	stalkie_big_nohaplotig	CDS	10094019	10094145	.	+	1	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 8142 8268 +
ChrX	stalkie_big_nohaplotig	CDS	10094436	10094657	.	+	0	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 8269 8490 +
ChrX	stalkie_big_nohaplotig	CDS	10094739	10094815	.	+	0	Parent=FBgn0031571.1.mrna1;Target=FBgn0031571.1 8491 8568 +
ChrX	gffcl	locus	10098654	10101989	.	+	.	ID=RLOC_00000537;geneIDs=FBgn0031549.1.path1;transcripts=FBgn0031549.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10098654	10101989	.	+	.	ID=FBgn0031549.1.mrna1;geneID=FBgn0031549.1.path1;Name=FBgn0031549.1;Dir=sensecoverage=100.0;identity=99.7;matches=2081;mismatches=7;indels=0;unknowns=0;locus=RLOC_00000537
ChrX	stalkie_big_nohaplotig	exon	10098654	10099268	99	+	.	Parent=FBgn0031549.1.mrna1;Target=FBgn0031549.1 1 615 +
ChrX	stalkie_big_nohaplotig	exon	10099338	10099503	100	+	.	Parent=FBgn0031549.1.mrna1;Target=FBgn0031549.1 616 781 +
ChrX	stalkie_big_nohaplotig	exon	10100306	10100521	98	+	.	Parent=FBgn0031549.1.mrna1;Target=FBgn0031549.1 782 997 +
ChrX	stalkie_big_nohaplotig	exon	10100596	10100737	100	+	.	Parent=FBgn0031549.1.mrna1;Target=FBgn0031549.1 998 1139 +
ChrX	stalkie_big_nohaplotig	exon	10100970	10101068	100	+	.	Parent=FBgn0031549.1.mrna1;Target=FBgn0031549.1 1140 1238 +
ChrX	stalkie_big_nohaplotig	exon	10101140	10101989	99	+	.	Parent=FBgn0031549.1.mrna1;Target=FBgn0031549.1 1239 2088 +
ChrX	stalkie_big_nohaplotig	CDS	10098654	10099268	.	+	0	Parent=FBgn0031549.1.mrna1;Target=FBgn0031549.1 1 615 +
ChrX	stalkie_big_nohaplotig	CDS	10099338	10099503	.	+	0	Parent=FBgn0031549.1.mrna1;Target=FBgn0031549.1 616 781 +
ChrX	stalkie_big_nohaplotig	CDS	10100306	10100521	.	+	2	Parent=FBgn0031549.1.mrna1;Target=FBgn0031549.1 782 997 +
ChrX	stalkie_big_nohaplotig	CDS	10100596	10100737	.	+	2	Parent=FBgn0031549.1.mrna1;Target=FBgn0031549.1 998 1139 +
ChrX	stalkie_big_nohaplotig	CDS	10100970	10101068	.	+	1	Parent=FBgn0031549.1.mrna1;Target=FBgn0031549.1 1140 1238 +
ChrX	stalkie_big_nohaplotig	CDS	10101140	10101989	.	+	1	Parent=FBgn0031549.1.mrna1;Target=FBgn0031549.1 1239 2088 +
ChrX	gffcl	locus	10102459	10104468	.	-	.	ID=RLOC_00000538;geneIDs=FBgn0031548.1.path1;transcripts=FBgn0031548.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10102459	10104468	.	-	.	ID=FBgn0031548.1.mrna1;geneID=FBgn0031548.1.path1;Name=FBgn0031548.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2007;mismatches=3;indels=0;unknowns=0;Target=FBgn0031548.1 2010 1 .;locus=RLOC_00000538
ChrX	stalkie_big_nohaplotig	exon	10102459	10104468	99	-	.	Parent=FBgn0031548.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10102459	10104468	.	-	0	Parent=FBgn0031548.1.mrna1
ChrX	gffcl	locus	10107240	10109018	.	+	.	ID=RLOC_00000539;geneIDs=FBgn0031546.1.path1;transcripts=FBgn0031546.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10107240	10109018	.	+	.	ID=FBgn0031546.1.mrna1;geneID=FBgn0031546.1.path1;Name=FBgn0031546.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1777;mismatches=2;indels=0;unknowns=0;Target=FBgn0031546.1 1779 1 .;locus=RLOC_00000539
ChrX	stalkie_big_nohaplotig	exon	10107240	10109018	99	+	.	Parent=FBgn0031546.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10107240	10109018	.	+	0	Parent=FBgn0031546.1.mrna1
ChrX	gffcl	locus	10110822	10112743	.	-	.	ID=RLOC_00000540;geneIDs=FBgn0031544.1.path1;transcripts=FBgn0031544.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10110822	10112743	.	-	.	ID=FBgn0031544.1.mrna1;geneID=FBgn0031544.1.path1;Name=FBgn0031544.1;Dir=sensecoverage=100.0;identity=99.9;matches=1468;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000540
ChrX	stalkie_big_nohaplotig	exon	10110822	10111058	99	-	.	Parent=FBgn0031544.1.mrna1;Target=FBgn0031544.1 1234 1470 +
ChrX	stalkie_big_nohaplotig	exon	10111116	10111463	100	-	.	Parent=FBgn0031544.1.mrna1;Target=FBgn0031544.1 886 1233 +
ChrX	stalkie_big_nohaplotig	exon	10111520	10111803	100	-	.	Parent=FBgn0031544.1.mrna1;Target=FBgn0031544.1 602 885 +
ChrX	stalkie_big_nohaplotig	exon	10112085	10112242	100	-	.	Parent=FBgn0031544.1.mrna1;Target=FBgn0031544.1 444 601 +
ChrX	stalkie_big_nohaplotig	exon	10112301	10112743	100	-	.	Parent=FBgn0031544.1.mrna1;Target=FBgn0031544.1 1 443 +
ChrX	stalkie_big_nohaplotig	CDS	10110822	10111058	.	-	0	Parent=FBgn0031544.1.mrna1;Target=FBgn0031544.1 1234 1470 +
ChrX	stalkie_big_nohaplotig	CDS	10111116	10111463	.	-	0	Parent=FBgn0031544.1.mrna1;Target=FBgn0031544.1 886 1233 +
ChrX	stalkie_big_nohaplotig	CDS	10111520	10111803	.	-	2	Parent=FBgn0031544.1.mrna1;Target=FBgn0031544.1 602 885 +
ChrX	stalkie_big_nohaplotig	CDS	10112085	10112242	.	-	1	Parent=FBgn0031544.1.mrna1;Target=FBgn0031544.1 444 601 +
ChrX	stalkie_big_nohaplotig	CDS	10112301	10112743	.	-	0	Parent=FBgn0031544.1.mrna1;Target=FBgn0031544.1 1 443 +
ChrX	gffcl	locus	10114808	10129220	.	+	.	ID=RLOC_00000541;geneIDs=FBgn0028387.1.path1;transcripts=FBgn0028387.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10114808	10129220	.	+	.	ID=FBgn0028387.1.mrna1;geneID=FBgn0028387.1.path1;Name=FBgn0028387.1;Dir=sensecoverage=100.0;identity=99.5;matches=2189;mismatches=9;indels=1;unknowns=0;Target=FBgn0028387.1 3 95 +;locus=RLOC_00000541
ChrX	stalkie_big_nohaplotig	exon	10114808	10116176	99	+	.	Parent=FBgn0028387.1.mrna1;Target=FBgn0028387.1 1 1370 +
ChrX	stalkie_big_nohaplotig	exon	10116241	10116613	100	+	.	Parent=FBgn0028387.1.mrna1;Target=FBgn0028387.1 1371 1743 +
ChrX	stalkie_big_nohaplotig	exon	10121962	10122049	98	+	.	Parent=FBgn0028387.1.mrna1;Target=FBgn0028387.1 1744 1831 +
ChrX	stalkie_big_nohaplotig	exon	10128730	10128887	98	+	.	Parent=FBgn0028387.1.mrna1;Target=FBgn0028387.1 1832 1989 +
ChrX	stalkie_big_nohaplotig	exon	10128940	10129035	100	+	.	Parent=FBgn0028387.1.mrna1;Target=FBgn0028387.1 1990 2085 +
ChrX	stalkie_big_nohaplotig	exon	10129107	10129220	99	+	.	Parent=FBgn0028387.1.mrna1;Target=FBgn0028387.1 2086 2199 +
ChrX	stalkie_big_nohaplotig	CDS	10114810	10114901	.	+	0	Parent=FBgn0028387.1.mrna1
ChrX	gffcl	locus	10136825	10138774	.	+	.	ID=RLOC_00000542;geneIDs=comp150200_c2_seq1.path1;transcripts=comp150200_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10136825	10138774	.	+	.	ID=comp150200_c2_seq1.mrna1;geneID=comp150200_c2_seq1.path1;Name=comp150200_c2_seq1;Dir=indeterminatecoverage=99.9;identity=98.5;matches=1934;mismatches=9;indels=21;unknowns=0;Target=comp150200_c2_seq1 1957 1 .;CDS_Target=comp150200_c2_seq1 262 2 .;locus=RLOC_00000542
ChrX	stalkie_big_nohaplotig	exon	10136825	10138774	98	+	.	Parent=comp150200_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10136826	10137087	.	+	0	Parent=comp150200_c2_seq1.mrna1
ChrX	gffcl	locus	10150894	10155177	.	.	.	ID=RLOC_00000543;geneIDs=FBgn0031912.1.path1,comp144330_c0_seq1.path1,comp988490_c0_seq1.path1;transcripts=FBgn0031912.1.mrna1,comp988490_c0_seq1.mrna1,comp144330_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10150894	10155177	.	+	.	ID=FBgn0031912.1.mrna1;geneID=FBgn0031912.1.path1;Name=FBgn0031912.1;Dir=sensecoverage=100.0;identity=99.0;matches=1595;mismatches=1;indels=15;unknowns=0;locus=RLOC_00000543
ChrX	stalkie_big_nohaplotig	exon	10150894	10151057	100	+	.	Parent=FBgn0031912.1.mrna1;Target=FBgn0031912.1 1 164 +
ChrX	stalkie_big_nohaplotig	exon	10151483	10151658	100	+	.	Parent=FBgn0031912.1.mrna1;Target=FBgn0031912.1 165 340 +
ChrX	stalkie_big_nohaplotig	exon	10151727	10152179	96	+	.	Parent=FBgn0031912.1.mrna1;Target=FBgn0031912.1 341 778 +
ChrX	stalkie_big_nohaplotig	exon	10152257	10152495	100	+	.	Parent=FBgn0031912.1.mrna1;Target=FBgn0031912.1 779 1017 +
ChrX	stalkie_big_nohaplotig	exon	10152562	10152710	100	+	.	Parent=FBgn0031912.1.mrna1;Target=FBgn0031912.1 1018 1166 +
ChrX	stalkie_big_nohaplotig	exon	10152767	10152966	100	+	.	Parent=FBgn0031912.1.mrna1;Target=FBgn0031912.1 1167 1366 +
ChrX	stalkie_big_nohaplotig	exon	10154890	10154992	100	+	.	Parent=FBgn0031912.1.mrna1;Target=FBgn0031912.1 1367 1469 +
ChrX	stalkie_big_nohaplotig	exon	10155051	10155177	100	+	.	Parent=FBgn0031912.1.mrna1;Target=FBgn0031912.1 1470 1596 +
ChrX	stalkie_big_nohaplotig	CDS	10150894	10151057	.	+	0	Parent=FBgn0031912.1.mrna1;Target=FBgn0031912.1 1 164 +
ChrX	stalkie_big_nohaplotig	CDS	10151483	10151658	.	+	1	Parent=FBgn0031912.1.mrna1;Target=FBgn0031912.1 165 340 +
ChrX	stalkie_big_nohaplotig	CDS	10151727	10152179	.	+	2	Parent=FBgn0031912.1.mrna1;Target=FBgn0031912.1 341 778 +
ChrX	stalkie_big_nohaplotig	CDS	10152257	10152495	.	+	2	Parent=FBgn0031912.1.mrna1;Target=FBgn0031912.1 779 1017 +
ChrX	stalkie_big_nohaplotig	CDS	10152562	10152710	.	+	0	Parent=FBgn0031912.1.mrna1;Target=FBgn0031912.1 1018 1166 +
ChrX	stalkie_big_nohaplotig	CDS	10152767	10152966	.	+	1	Parent=FBgn0031912.1.mrna1;Target=FBgn0031912.1 1167 1366 +
ChrX	stalkie_big_nohaplotig	CDS	10154890	10154992	.	+	2	Parent=FBgn0031912.1.mrna1;Target=FBgn0031912.1 1367 1469 +
ChrX	stalkie_big_nohaplotig	CDS	10155051	10155177	.	+	1	Parent=FBgn0031912.1.mrna1;Target=FBgn0031912.1 1470 1596 +
ChrX	stalkie_big_nohaplotig	mRNA	10152944	10153548	.	-	.	ID=comp988490_c0_seq1.mrna1;geneID=comp988490_c0_seq1.path1;Name=comp988490_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=604;mismatches=1;indels=0;unknowns=0;Target=comp988490_c0_seq1 606 2 .;CDS_Target=comp988490_c0_seq1 380 198 .;locus=RLOC_00000543
ChrX	stalkie_big_nohaplotig	exon	10152944	10153548	99	-	.	Parent=comp988490_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10153170	10153352	.	-	0	Parent=comp988490_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10153572	10154911	.	-	.	ID=comp144330_c0_seq1.mrna1;geneID=comp144330_c0_seq1.path1;Name=comp144330_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1337;mismatches=3;indels=0;unknowns=0;Target=comp144330_c0_seq1 1340 1 .;CDS_Target=comp144330_c0_seq1 240 67 .;locus=RLOC_00000543
ChrX	stalkie_big_nohaplotig	exon	10153572	10154911	99	-	.	Parent=comp144330_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10154672	10154845	.	-	0	Parent=comp144330_c0_seq1.mrna1
ChrX	gffcl	locus	10155959	10159553	.	.	.	ID=RLOC_00000544;geneIDs=FBgn0031913.1.path1,comp89138_c0_seq1.path1,comp152585_c0_seq1.path1;transcripts=FBgn0031913.1.mrna1,comp152585_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10155959	10159265	.	-	.	ID=FBgn0031913.1.mrna1;geneID=FBgn0031913.1.path1;Name=FBgn0031913.1;Dir=sensecoverage=100.0;identity=99.9;matches=947;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000544
ChrX	stalkie_big_nohaplotig	exon	10155959	10156138	100	-	.	Parent=FBgn0031913.1.mrna1;Target=FBgn0031913.1 769 948 +
ChrX	stalkie_big_nohaplotig	exon	10156206	10156667	99	-	.	Parent=FBgn0031913.1.mrna1;Target=FBgn0031913.1 307 768 +
ChrX	stalkie_big_nohaplotig	exon	10158960	10159265	100	-	.	Parent=FBgn0031913.1.mrna1;Target=FBgn0031913.1 1 306 +
ChrX	stalkie_big_nohaplotig	CDS	10155959	10156138	.	-	0	Parent=FBgn0031913.1.mrna1;Target=FBgn0031913.1 769 948 +
ChrX	stalkie_big_nohaplotig	CDS	10156206	10156667	.	-	0	Parent=FBgn0031913.1.mrna1;Target=FBgn0031913.1 307 768 +
ChrX	stalkie_big_nohaplotig	CDS	10158960	10159265	.	-	0	Parent=FBgn0031913.1.mrna1;Target=FBgn0031913.1 1 306 +
ChrX	stalkie_big_nohaplotig	mRNA	10156645	10158982	.	-	.	ID=comp152585_c0_seq1.mrna1;geneID=comp152585_c0_seq1.path1;Name=comp152585_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=2321;mismatches=16;indels=10;unknowns=0;Target=comp152585_c0_seq1 2346 1 .;CDS_Target=comp152585_c0_seq1 1002 829 .;locus=RLOC_00000544
ChrX	stalkie_big_nohaplotig	exon	10156645	10158982	98	-	.	Parent=comp152585_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10157982	10158155	.	-	0	Parent=comp152585_c0_seq1.mrna1
ChrX	gffcl	locus	10183967	10184251	.	+	.	ID=RLOC_00000545;geneIDs=comp163683_c3_seq1.path2;transcripts=comp163683_c3_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	10183967	10184251	.	+	.	ID=comp163683_c3_seq1.mrna2;geneID=comp163683_c3_seq1.path2;Name=comp163683_c3_seq1;Dir=indeterminatecoverage=21.5;identity=99.3;matches=283;mismatches=2;indels=0;unknowns=0;Target=comp163683_c3_seq1 1326 1042 .;locus=RLOC_00000545
ChrX	stalkie_big_nohaplotig	exon	10183967	10184251	99	+	.	Parent=comp163683_c3_seq1.mrna2
ChrX	gffcl	locus	10184431	10188450	.	+	.	ID=RLOC_00000546;geneIDs=FBgn0031914.1.path1;transcripts=FBgn0031914.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10184431	10188450	.	+	.	ID=FBgn0031914.1.mrna1;geneID=FBgn0031914.1.path1;Name=FBgn0031914.1;Dir=sensecoverage=100.0;identity=99.9;matches=941;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000546
ChrX	stalkie_big_nohaplotig	exon	10184431	10184626	100	+	.	Parent=FBgn0031914.1.mrna1;Target=FBgn0031914.1 1 196 +
ChrX	stalkie_big_nohaplotig	exon	10184693	10184784	100	+	.	Parent=FBgn0031914.1.mrna1;Target=FBgn0031914.1 197 288 +
ChrX	stalkie_big_nohaplotig	exon	10184844	10184997	99	+	.	Parent=FBgn0031914.1.mrna1;Target=FBgn0031914.1 289 442 +
ChrX	stalkie_big_nohaplotig	exon	10187746	10187871	100	+	.	Parent=FBgn0031914.1.mrna1;Target=FBgn0031914.1 443 568 +
ChrX	stalkie_big_nohaplotig	exon	10187945	10188123	100	+	.	Parent=FBgn0031914.1.mrna1;Target=FBgn0031914.1 569 747 +
ChrX	stalkie_big_nohaplotig	exon	10188187	10188337	100	+	.	Parent=FBgn0031914.1.mrna1;Target=FBgn0031914.1 748 898 +
ChrX	stalkie_big_nohaplotig	exon	10188407	10188450	100	+	.	Parent=FBgn0031914.1.mrna1;Target=FBgn0031914.1 899 942 +
ChrX	stalkie_big_nohaplotig	CDS	10184431	10184626	.	+	0	Parent=FBgn0031914.1.mrna1;Target=FBgn0031914.1 1 196 +
ChrX	stalkie_big_nohaplotig	CDS	10184693	10184784	.	+	2	Parent=FBgn0031914.1.mrna1;Target=FBgn0031914.1 197 288 +
ChrX	stalkie_big_nohaplotig	CDS	10184844	10184997	.	+	0	Parent=FBgn0031914.1.mrna1;Target=FBgn0031914.1 289 442 +
ChrX	stalkie_big_nohaplotig	CDS	10187746	10187871	.	+	2	Parent=FBgn0031914.1.mrna1;Target=FBgn0031914.1 443 568 +
ChrX	stalkie_big_nohaplotig	CDS	10187945	10188123	.	+	2	Parent=FBgn0031914.1.mrna1;Target=FBgn0031914.1 569 747 +
ChrX	stalkie_big_nohaplotig	CDS	10188187	10188337	.	+	0	Parent=FBgn0031914.1.mrna1;Target=FBgn0031914.1 748 898 +
ChrX	stalkie_big_nohaplotig	CDS	10188407	10188450	.	+	2	Parent=FBgn0031914.1.mrna1;Target=FBgn0031914.1 899 942 +
ChrX	gffcl	locus	10232448	10235863	.	+	.	ID=RLOC_00000547;geneIDs=FBgn0000097.1.path1;transcripts=FBgn0000097.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10232448	10235863	.	+	.	ID=FBgn0000097.1.mrna1;geneID=FBgn0000097.1.path1;Name=FBgn0000097.1;Dir=sensecoverage=99.7;identity=100.0;matches=2218;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000547
ChrX	stalkie_big_nohaplotig	exon	10232448	10233563	100	+	.	Parent=FBgn0000097.1.mrna1;Target=FBgn0000097.1 8 1123 +
ChrX	stalkie_big_nohaplotig	exon	10234699	10235566	99	+	.	Parent=FBgn0000097.1.mrna1;Target=FBgn0000097.1 1124 1991 +
ChrX	stalkie_big_nohaplotig	exon	10235629	10235863	100	+	.	Parent=FBgn0000097.1.mrna1;Target=FBgn0000097.1 1992 2226 +
ChrX	stalkie_big_nohaplotig	CDS	10232450	10233563	.	+	0	Parent=FBgn0000097.1.mrna1;Target=FBgn0000097.1 10 1123 +
ChrX	stalkie_big_nohaplotig	CDS	10234699	10235566	.	+	2	Parent=FBgn0000097.1.mrna1;Target=FBgn0000097.1 1124 1991 +
ChrX	stalkie_big_nohaplotig	CDS	10235629	10235863	.	+	1	Parent=FBgn0000097.1.mrna1;Target=FBgn0000097.1 1992 2226 +
ChrX	gffcl	locus	10237333	10237697	.	-	.	ID=RLOC_00000548;geneIDs=comp113274_c0_seq1.path1;transcripts=comp113274_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10237333	10237697	.	-	.	ID=comp113274_c0_seq1.mrna1;geneID=comp113274_c0_seq1.path1;Name=comp113274_c0_seq1;Dir=indeterminatecoverage=98.9;identity=100.0;matches=365;mismatches=0;indels=0;unknowns=0;Target=comp113274_c0_seq1 369 5 .;CDS_Target=comp113274_c0_seq1 274 182 .;locus=RLOC_00000548
ChrX	stalkie_big_nohaplotig	exon	10237333	10237697	100	-	.	Parent=comp113274_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10237428	10237520	.	-	0	Parent=comp113274_c0_seq1.mrna1
ChrX	gffcl	locus	10241595	10246110	.	-	.	ID=RLOC_00000549;geneIDs=FBgn0031392.1.path1;transcripts=FBgn0031392.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10241595	10246110	.	-	.	ID=FBgn0031392.1.mrna1;geneID=FBgn0031392.1.path1;Name=FBgn0031392.1;Dir=sensecoverage=100.0;identity=100.0;matches=2472;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000549
ChrX	stalkie_big_nohaplotig	exon	10241595	10241992	100	-	.	Parent=FBgn0031392.1.mrna1;Target=FBgn0031392.1 2075 2472 +
ChrX	stalkie_big_nohaplotig	exon	10242060	10242171	100	-	.	Parent=FBgn0031392.1.mrna1;Target=FBgn0031392.1 1963 2074 +
ChrX	stalkie_big_nohaplotig	exon	10243237	10243362	100	-	.	Parent=FBgn0031392.1.mrna1;Target=FBgn0031392.1 1837 1962 +
ChrX	stalkie_big_nohaplotig	exon	10243427	10243824	100	-	.	Parent=FBgn0031392.1.mrna1;Target=FBgn0031392.1 1439 1836 +
ChrX	stalkie_big_nohaplotig	exon	10243884	10244193	100	-	.	Parent=FBgn0031392.1.mrna1;Target=FBgn0031392.1 1129 1438 +
ChrX	stalkie_big_nohaplotig	exon	10244246	10244358	100	-	.	Parent=FBgn0031392.1.mrna1;Target=FBgn0031392.1 1016 1128 +
ChrX	stalkie_big_nohaplotig	exon	10244415	10244493	100	-	.	Parent=FBgn0031392.1.mrna1;Target=FBgn0031392.1 937 1015 +
ChrX	stalkie_big_nohaplotig	exon	10244565	10245067	100	-	.	Parent=FBgn0031392.1.mrna1;Target=FBgn0031392.1 434 936 +
ChrX	stalkie_big_nohaplotig	exon	10245500	10245614	100	-	.	Parent=FBgn0031392.1.mrna1;Target=FBgn0031392.1 319 433 +
ChrX	stalkie_big_nohaplotig	exon	10245670	10245887	100	-	.	Parent=FBgn0031392.1.mrna1;Target=FBgn0031392.1 101 318 +
ChrX	stalkie_big_nohaplotig	exon	10246011	10246110	100	-	.	Parent=FBgn0031392.1.mrna1;Target=FBgn0031392.1 1 100 +
ChrX	stalkie_big_nohaplotig	CDS	10241595	10241992	.	-	2	Parent=FBgn0031392.1.mrna1;Target=FBgn0031392.1 2075 2472 +
ChrX	stalkie_big_nohaplotig	CDS	10242060	10242171	.	-	0	Parent=FBgn0031392.1.mrna1;Target=FBgn0031392.1 1963 2074 +
ChrX	stalkie_big_nohaplotig	CDS	10243237	10243362	.	-	0	Parent=FBgn0031392.1.mrna1;Target=FBgn0031392.1 1837 1962 +
ChrX	stalkie_big_nohaplotig	CDS	10243427	10243824	.	-	2	Parent=FBgn0031392.1.mrna1;Target=FBgn0031392.1 1439 1836 +
ChrX	stalkie_big_nohaplotig	CDS	10243884	10244193	.	-	0	Parent=FBgn0031392.1.mrna1;Target=FBgn0031392.1 1129 1438 +
ChrX	stalkie_big_nohaplotig	CDS	10244246	10244358	.	-	2	Parent=FBgn0031392.1.mrna1;Target=FBgn0031392.1 1016 1128 +
ChrX	stalkie_big_nohaplotig	CDS	10244415	10244493	.	-	0	Parent=FBgn0031392.1.mrna1;Target=FBgn0031392.1 937 1015 +
ChrX	stalkie_big_nohaplotig	CDS	10244565	10245067	.	-	2	Parent=FBgn0031392.1.mrna1;Target=FBgn0031392.1 434 936 +
ChrX	stalkie_big_nohaplotig	CDS	10245500	10245614	.	-	0	Parent=FBgn0031392.1.mrna1;Target=FBgn0031392.1 319 433 +
ChrX	stalkie_big_nohaplotig	CDS	10245670	10245887	.	-	2	Parent=FBgn0031392.1.mrna1;Target=FBgn0031392.1 101 318 +
ChrX	stalkie_big_nohaplotig	CDS	10246011	10246110	.	-	0	Parent=FBgn0031392.1.mrna1;Target=FBgn0031392.1 1 100 +
ChrX	gffcl	locus	10259941	10264168	.	+	.	ID=RLOC_00000550;geneIDs=FBgn0027560.1.path1;transcripts=FBgn0027560.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10259941	10264168	.	+	.	ID=FBgn0027560.1.mrna1;geneID=FBgn0027560.1.path1;Name=FBgn0027560.1;Dir=sensecoverage=100.0;identity=99.8;matches=2441;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000550
ChrX	stalkie_big_nohaplotig	exon	10259941	10260083	100	+	.	Parent=FBgn0027560.1.mrna1;Target=FBgn0027560.1 1 143 +
ChrX	stalkie_big_nohaplotig	exon	10261343	10261499	100	+	.	Parent=FBgn0027560.1.mrna1;Target=FBgn0027560.1 144 300 +
ChrX	stalkie_big_nohaplotig	exon	10261835	10263111	99	+	.	Parent=FBgn0027560.1.mrna1;Target=FBgn0027560.1 301 1577 +
ChrX	stalkie_big_nohaplotig	exon	10263168	10263495	99	+	.	Parent=FBgn0027560.1.mrna1;Target=FBgn0027560.1 1578 1905 +
ChrX	stalkie_big_nohaplotig	exon	10263562	10263855	100	+	.	Parent=FBgn0027560.1.mrna1;Target=FBgn0027560.1 1906 2199 +
ChrX	stalkie_big_nohaplotig	exon	10263923	10264168	99	+	.	Parent=FBgn0027560.1.mrna1;Target=FBgn0027560.1 2200 2445 +
ChrX	stalkie_big_nohaplotig	CDS	10259941	10260083	.	+	0	Parent=FBgn0027560.1.mrna1;Target=FBgn0027560.1 1 143 +
ChrX	stalkie_big_nohaplotig	CDS	10261343	10261499	.	+	1	Parent=FBgn0027560.1.mrna1;Target=FBgn0027560.1 144 300 +
ChrX	stalkie_big_nohaplotig	CDS	10261835	10263111	.	+	0	Parent=FBgn0027560.1.mrna1;Target=FBgn0027560.1 301 1577 +
ChrX	stalkie_big_nohaplotig	CDS	10263168	10263495	.	+	1	Parent=FBgn0027560.1.mrna1;Target=FBgn0027560.1 1578 1905 +
ChrX	stalkie_big_nohaplotig	CDS	10263562	10263855	.	+	0	Parent=FBgn0027560.1.mrna1;Target=FBgn0027560.1 1906 2199 +
ChrX	stalkie_big_nohaplotig	CDS	10263923	10264168	.	+	0	Parent=FBgn0027560.1.mrna1;Target=FBgn0027560.1 2200 2445 +
ChrX	gffcl	locus	10265578	10266562	.	-	.	ID=RLOC_00000551;geneIDs=FBgn0031600.1.path1;transcripts=FBgn0031600.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10265578	10266562	.	-	.	ID=FBgn0031600.1.mrna1;geneID=FBgn0031600.1.path1;Name=FBgn0031600.1;Dir=sensecoverage=100.0;identity=99.7;matches=682;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000551
ChrX	stalkie_big_nohaplotig	exon	10265578	10265687	100	-	.	Parent=FBgn0031600.1.mrna1;Target=FBgn0031600.1 575 684 +
ChrX	stalkie_big_nohaplotig	exon	10265748	10265905	99	-	.	Parent=FBgn0031600.1.mrna1;Target=FBgn0031600.1 417 574 +
ChrX	stalkie_big_nohaplotig	exon	10265967	10266135	100	-	.	Parent=FBgn0031600.1.mrna1;Target=FBgn0031600.1 248 416 +
ChrX	stalkie_big_nohaplotig	exon	10266202	10266280	98	-	.	Parent=FBgn0031600.1.mrna1;Target=FBgn0031600.1 169 247 +
ChrX	stalkie_big_nohaplotig	exon	10266339	10266476	100	-	.	Parent=FBgn0031600.1.mrna1;Target=FBgn0031600.1 31 168 +
ChrX	stalkie_big_nohaplotig	exon	10266533	10266562	100	-	.	Parent=FBgn0031600.1.mrna1;Target=FBgn0031600.1 1 30 +
ChrX	stalkie_big_nohaplotig	CDS	10265578	10265687	.	-	2	Parent=FBgn0031600.1.mrna1;Target=FBgn0031600.1 575 684 +
ChrX	stalkie_big_nohaplotig	CDS	10265748	10265905	.	-	1	Parent=FBgn0031600.1.mrna1;Target=FBgn0031600.1 417 574 +
ChrX	stalkie_big_nohaplotig	CDS	10265967	10266135	.	-	2	Parent=FBgn0031600.1.mrna1;Target=FBgn0031600.1 248 416 +
ChrX	stalkie_big_nohaplotig	CDS	10266202	10266280	.	-	0	Parent=FBgn0031600.1.mrna1;Target=FBgn0031600.1 169 247 +
ChrX	stalkie_big_nohaplotig	CDS	10266339	10266476	.	-	0	Parent=FBgn0031600.1.mrna1;Target=FBgn0031600.1 31 168 +
ChrX	stalkie_big_nohaplotig	CDS	10266533	10266562	.	-	0	Parent=FBgn0031600.1.mrna1;Target=FBgn0031600.1 1 30 +
ChrX	gffcl	locus	10268016	10274719	.	.	.	ID=RLOC_00000552;geneIDs=FBgn0031908.1.path1,comp110579_c0_seq1.path1,comp131410_c1_seq1.path1;transcripts=FBgn0031908.1.mrna1,comp110579_c0_seq1.mrna1,comp131410_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10268016	10274719	.	-	.	ID=FBgn0031908.1.mrna1;geneID=FBgn0031908.1.path1;Name=FBgn0031908.1;Dir=sensecoverage=100.0;identity=100.0;matches=843;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000552
ChrX	stalkie_big_nohaplotig	exon	10268016	10268263	100	-	.	Parent=FBgn0031908.1.mrna1;Target=FBgn0031908.1 596 843 +
ChrX	stalkie_big_nohaplotig	exon	10272421	10272607	100	-	.	Parent=FBgn0031908.1.mrna1;Target=FBgn0031908.1 409 595 +
ChrX	stalkie_big_nohaplotig	exon	10274227	10274551	100	-	.	Parent=FBgn0031908.1.mrna1;Target=FBgn0031908.1 84 408 +
ChrX	stalkie_big_nohaplotig	exon	10274637	10274719	100	-	.	Parent=FBgn0031908.1.mrna1;Target=FBgn0031908.1 1 83 +
ChrX	stalkie_big_nohaplotig	CDS	10268016	10268263	.	-	2	Parent=FBgn0031908.1.mrna1;Target=FBgn0031908.1 596 843 +
ChrX	stalkie_big_nohaplotig	CDS	10272421	10272607	.	-	0	Parent=FBgn0031908.1.mrna1;Target=FBgn0031908.1 409 595 +
ChrX	stalkie_big_nohaplotig	CDS	10274227	10274551	.	-	1	Parent=FBgn0031908.1.mrna1;Target=FBgn0031908.1 84 408 +
ChrX	stalkie_big_nohaplotig	CDS	10274637	10274719	.	-	0	Parent=FBgn0031908.1.mrna1;Target=FBgn0031908.1 1 83 +
ChrX	stalkie_big_nohaplotig	mRNA	10268243	10268825	.	+	.	ID=comp110579_c0_seq1.mrna1;geneID=comp110579_c0_seq1.path1;Name=comp110579_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=580;mismatches=3;indels=0;unknowns=0;Target=comp110579_c0_seq1 583 1 .;CDS_Target=comp110579_c0_seq1 74 3 .;locus=RLOC_00000552
ChrX	stalkie_big_nohaplotig	exon	10268243	10268825	99	+	.	Parent=comp110579_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10268245	10268316	.	+	0	Parent=comp110579_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10273624	10274246	.	+	.	ID=comp131410_c1_seq1.mrna1;geneID=comp131410_c1_seq1.path1;Name=comp131410_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=623;mismatches=0;indels=0;unknowns=0;Target=comp131410_c1_seq1 623 1 .;CDS_Target=comp131410_c1_seq1 477 385 .;locus=RLOC_00000552
ChrX	stalkie_big_nohaplotig	exon	10273624	10274246	100	+	.	Parent=comp131410_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10274008	10274100	.	+	0	Parent=comp131410_c1_seq1.mrna1
ChrX	gffcl	locus	10269867	10270649	.	-	.	ID=RLOC_00000553;geneIDs=comp117344_c0_seq1.path1;transcripts=comp117344_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10269867	10270649	.	-	.	ID=comp117344_c0_seq1.mrna1;geneID=comp117344_c0_seq1.path1;Name=comp117344_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=782;mismatches=1;indels=0;unknowns=0;Target=comp117344_c0_seq1 783 1 .;CDS_Target=comp117344_c0_seq1 670 518 .;locus=RLOC_00000553
ChrX	stalkie_big_nohaplotig	exon	10269867	10270649	99	-	.	Parent=comp117344_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10269980	10270132	.	-	0	Parent=comp117344_c0_seq1.mrna1
ChrX	gffcl	locus	10271985	11927448	.	-	.	ID=RLOC_00000554;geneIDs=comp115923_c0_seq1.path1;transcripts=comp115923_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10271985	11927448	.	-	.	ID=comp115923_c0_seq1.mrna1;geneID=comp115923_c0_seq1.path1;Name=comp115923_c0_seq1;Dir=indeterminatecoverage=43.8;identity=95.4;matches=187;mismatches=5;indels=4;unknowns=0;Target=comp115923_c0_seq1 78 1 .;locus=RLOC_00000554
ChrX	stalkie_big_nohaplotig	exon	10271985	10271996	91	-	.	Parent=comp115923_c0_seq1.mrna1;Target=comp115923_c0_seq1 196 185 .
ChrX	stalkie_big_nohaplotig	exon	10293730	10293733	100	-	.	Parent=comp115923_c0_seq1.mrna1;Target=comp115923_c0_seq1 184 181 .
ChrX	stalkie_big_nohaplotig	exon	10305752	10305762	100	-	.	Parent=comp115923_c0_seq1.mrna1;Target=comp115923_c0_seq1 180 170 .
ChrX	stalkie_big_nohaplotig	exon	10308395	10308400	100	-	.	Parent=comp115923_c0_seq1.mrna1;Target=comp115923_c0_seq1 169 164 .
ChrX	stalkie_big_nohaplotig	exon	10311967	10311968	100	-	.	Parent=comp115923_c0_seq1.mrna1;Target=comp115923_c0_seq1 163 162 .
ChrX	stalkie_big_nohaplotig	exon	11898656	11898658	28	-	.	Parent=comp115923_c0_seq1.mrna1;Target=comp115923_c0_seq1 161 155 .
ChrX	stalkie_big_nohaplotig	exon	11927295	11927448	98	-	.	Parent=comp115923_c0_seq1.mrna1;Target=comp115923_c0_seq1 154 1 .
ChrX	stalkie_big_nohaplotig	CDS	11927371	11927448	.	-	0	Parent=comp115923_c0_seq1.mrna1
ChrX	gffcl	locus	10274752	10274986	.	-	.	ID=RLOC_00000555;geneIDs=comp153199_c1_seq1.path1;transcripts=comp153199_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10274752	10274986	.	-	.	ID=comp153199_c1_seq1.mrna1;geneID=comp153199_c1_seq1.path1;Name=comp153199_c1_seq1;Dir=indeterminatecoverage=5.4;identity=99.6;matches=234;mismatches=1;indels=0;unknowns=0;Target=comp153199_c1_seq1 235 1 .;locus=RLOC_00000555
ChrX	stalkie_big_nohaplotig	exon	10274752	10274986	99	-	.	Parent=comp153199_c1_seq1.mrna1
ChrX	gffcl	locus	10275540	10279887	.	-	.	ID=RLOC_00000556;geneIDs=FBgn0031907.2.path1,comp155350_c1_seq1.path1;transcripts=comp155350_c1_seq1.mrna1,FBgn0031907.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10275540	10278990	.	-	.	ID=comp155350_c1_seq1.mrna1;geneID=comp155350_c1_seq1.path1;Name=comp155350_c1_seq1;Dir=sensecoverage=100.0;identity=98.9;matches=3138;mismatches=12;indels=24;unknowns=0;locus=RLOC_00000556
ChrX	stalkie_big_nohaplotig	exon	10275540	10275700	100	-	.	Parent=comp155350_c1_seq1.mrna1;Target=comp155350_c1_seq1 3014 3174 +
ChrX	stalkie_big_nohaplotig	exon	10275761	10275867	100	-	.	Parent=comp155350_c1_seq1.mrna1;Target=comp155350_c1_seq1 2907 3013 +
ChrX	stalkie_big_nohaplotig	exon	10275957	10277350	99	-	.	Parent=comp155350_c1_seq1.mrna1;Target=comp155350_c1_seq1 1513 2906 +
ChrX	stalkie_big_nohaplotig	exon	10277503	10278990	97	-	.	Parent=comp155350_c1_seq1.mrna1;Target=comp155350_c1_seq1 1 1512 +
ChrX	stalkie_big_nohaplotig	CDS	10275566	10275700	.	-	0	Parent=comp155350_c1_seq1.mrna1;Target=comp155350_c1_seq1 3014 3148 +
ChrX	stalkie_big_nohaplotig	CDS	10275761	10275766	.	-	0	Parent=comp155350_c1_seq1.mrna1;Target=comp155350_c1_seq1 3008 3013 +
ChrX	stalkie_big_nohaplotig	mRNA	10275569	10279887	.	-	.	ID=FBgn0031907.2.mrna1;geneID=FBgn0031907.2.path1;Name=FBgn0031907.2;Dir=sensecoverage=100.0;identity=99.7;matches=981;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000556
ChrX	stalkie_big_nohaplotig	exon	10275569	10275700	100	-	.	Parent=FBgn0031907.2.mrna1;Target=FBgn0031907.2 853 984 +
ChrX	stalkie_big_nohaplotig	exon	10275761	10275867	100	-	.	Parent=FBgn0031907.2.mrna1;Target=FBgn0031907.2 746 852 +
ChrX	stalkie_big_nohaplotig	exon	10275957	10276477	99	-	.	Parent=FBgn0031907.2.mrna1;Target=FBgn0031907.2 225 745 +
ChrX	stalkie_big_nohaplotig	exon	10279664	10279887	99	-	.	Parent=FBgn0031907.2.mrna1;Target=FBgn0031907.2 1 224 +
ChrX	stalkie_big_nohaplotig	CDS	10275569	10275700	.	-	0	Parent=FBgn0031907.2.mrna1;Target=FBgn0031907.2 853 984 +
ChrX	stalkie_big_nohaplotig	CDS	10275761	10275867	.	-	2	Parent=FBgn0031907.2.mrna1;Target=FBgn0031907.2 746 852 +
ChrX	stalkie_big_nohaplotig	CDS	10275957	10276477	.	-	1	Parent=FBgn0031907.2.mrna1;Target=FBgn0031907.2 225 745 +
ChrX	stalkie_big_nohaplotig	CDS	10279664	10279887	.	-	0	Parent=FBgn0031907.2.mrna1;Target=FBgn0031907.2 1 224 +
ChrX	gffcl	locus	10280503	10282860	.	+	.	ID=RLOC_00000557;geneIDs=FBgn0031905.1.path1;transcripts=FBgn0031905.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10280503	10282860	.	+	.	ID=FBgn0031905.1.mrna1;geneID=FBgn0031905.1.path1;Name=FBgn0031905.1;Dir=sensecoverage=100.0;identity=100.0;matches=2117;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000557
ChrX	stalkie_big_nohaplotig	exon	10280503	10281227	99	+	.	Parent=FBgn0031905.1.mrna1;Target=FBgn0031905.1 1 725 +
ChrX	stalkie_big_nohaplotig	exon	10281287	10281509	100	+	.	Parent=FBgn0031905.1.mrna1;Target=FBgn0031905.1 726 948 +
ChrX	stalkie_big_nohaplotig	exon	10281569	10282382	100	+	.	Parent=FBgn0031905.1.mrna1;Target=FBgn0031905.1 949 1762 +
ChrX	stalkie_big_nohaplotig	exon	10282442	10282656	100	+	.	Parent=FBgn0031905.1.mrna1;Target=FBgn0031905.1 1763 1977 +
ChrX	stalkie_big_nohaplotig	exon	10282720	10282860	100	+	.	Parent=FBgn0031905.1.mrna1;Target=FBgn0031905.1 1978 2118 +
ChrX	stalkie_big_nohaplotig	CDS	10280503	10281227	.	+	0	Parent=FBgn0031905.1.mrna1;Target=FBgn0031905.1 1 725 +
ChrX	stalkie_big_nohaplotig	CDS	10281287	10281509	.	+	1	Parent=FBgn0031905.1.mrna1;Target=FBgn0031905.1 726 948 +
ChrX	stalkie_big_nohaplotig	CDS	10281569	10282382	.	+	0	Parent=FBgn0031905.1.mrna1;Target=FBgn0031905.1 949 1762 +
ChrX	stalkie_big_nohaplotig	CDS	10282442	10282656	.	+	2	Parent=FBgn0031905.1.mrna1;Target=FBgn0031905.1 1763 1977 +
ChrX	stalkie_big_nohaplotig	CDS	10282720	10282860	.	+	0	Parent=FBgn0031905.1.mrna1;Target=FBgn0031905.1 1978 2118 +
ChrX	gffcl	locus	10283096	10285117	.	-	.	ID=RLOC_00000558;geneIDs=FBgn0031906.1.path1;transcripts=FBgn0031906.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10283096	10285117	.	-	.	ID=FBgn0031906.1.mrna1;geneID=FBgn0031906.1.path1;Name=FBgn0031906.1;Dir=sensecoverage=100.0;identity=100.0;matches=981;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000558
ChrX	stalkie_big_nohaplotig	exon	10283096	10283328	100	-	.	Parent=FBgn0031906.1.mrna1;Target=FBgn0031906.1 749 981 +
ChrX	stalkie_big_nohaplotig	exon	10283386	10283569	100	-	.	Parent=FBgn0031906.1.mrna1;Target=FBgn0031906.1 565 748 +
ChrX	stalkie_big_nohaplotig	exon	10283656	10283811	100	-	.	Parent=FBgn0031906.1.mrna1;Target=FBgn0031906.1 409 564 +
ChrX	stalkie_big_nohaplotig	exon	10284581	10284742	100	-	.	Parent=FBgn0031906.1.mrna1;Target=FBgn0031906.1 247 408 +
ChrX	stalkie_big_nohaplotig	exon	10284799	10284932	100	-	.	Parent=FBgn0031906.1.mrna1;Target=FBgn0031906.1 113 246 +
ChrX	stalkie_big_nohaplotig	exon	10285006	10285117	100	-	.	Parent=FBgn0031906.1.mrna1;Target=FBgn0031906.1 1 112 +
ChrX	stalkie_big_nohaplotig	CDS	10283096	10283328	.	-	2	Parent=FBgn0031906.1.mrna1;Target=FBgn0031906.1 749 981 +
ChrX	stalkie_big_nohaplotig	CDS	10283386	10283569	.	-	0	Parent=FBgn0031906.1.mrna1;Target=FBgn0031906.1 565 748 +
ChrX	stalkie_big_nohaplotig	CDS	10283656	10283811	.	-	0	Parent=FBgn0031906.1.mrna1;Target=FBgn0031906.1 409 564 +
ChrX	stalkie_big_nohaplotig	CDS	10284581	10284742	.	-	0	Parent=FBgn0031906.1.mrna1;Target=FBgn0031906.1 247 408 +
ChrX	stalkie_big_nohaplotig	CDS	10284799	10284932	.	-	2	Parent=FBgn0031906.1.mrna1;Target=FBgn0031906.1 113 246 +
ChrX	stalkie_big_nohaplotig	CDS	10285006	10285117	.	-	0	Parent=FBgn0031906.1.mrna1;Target=FBgn0031906.1 1 112 +
ChrX	gffcl	locus	10290846	10292735	.	-	.	ID=RLOC_00000559;geneIDs=comp116608_c0_seq1.path1;transcripts=comp116608_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10290846	10292735	.	-	.	ID=comp116608_c0_seq1.mrna1;geneID=comp116608_c0_seq1.path1;Name=comp116608_c0_seq1;Dir=sensecoverage=99.9;identity=100.0;matches=1821;mismatches=0;indels=0;unknowns=0;Target=comp116608_c0_seq1 1348 1455 +;locus=RLOC_00000559
ChrX	stalkie_big_nohaplotig	exon	10290846	10291933	100	-	.	Parent=comp116608_c0_seq1.mrna1;Target=comp116608_c0_seq1 735 1822 +
ChrX	stalkie_big_nohaplotig	exon	10292003	10292735	100	-	.	Parent=comp116608_c0_seq1.mrna1;Target=comp116608_c0_seq1 2 734 +
ChrX	stalkie_big_nohaplotig	CDS	10291213	10291320	.	-	0	Parent=comp116608_c0_seq1.mrna1
ChrX	gffcl	locus	10294832	10296237	.	-	.	ID=RLOC_00000560;geneIDs=comp115150_c0_seq1.path1;transcripts=comp115150_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10294832	10296237	.	-	.	ID=comp115150_c0_seq1.mrna1;geneID=comp115150_c0_seq1.path1;Name=comp115150_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.5;matches=1399;mismatches=4;indels=3;unknowns=0;Target=comp115150_c0_seq1 1404 2 .;CDS_Target=comp115150_c0_seq1 1116 1018 .;locus=RLOC_00000560
ChrX	stalkie_big_nohaplotig	exon	10294832	10296237	99	-	.	Parent=comp115150_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10295120	10295218	.	-	0	Parent=comp115150_c0_seq1.mrna1
ChrX	gffcl	locus	10296441	10300675	.	.	.	ID=RLOC_00000561;geneIDs=FBgn0031907.1.path1,comp147497_c0_seq1.path1,comp153461_c0_seq1.path1;transcripts=FBgn0031907.1.mrna1,comp153461_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10297538	10300675	.	+	.	ID=FBgn0031907.1.mrna1;geneID=FBgn0031907.1.path1;Name=FBgn0031907.1;Dir=sensecoverage=99.1;identity=100.0;matches=948;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000561
ChrX	stalkie_big_nohaplotig	exon	10297538	10297731	100	+	.	Parent=FBgn0031907.1.mrna1;Target=FBgn0031907.1 10 203 +
ChrX	stalkie_big_nohaplotig	exon	10299813	10300327	100	+	.	Parent=FBgn0031907.1.mrna1;Target=FBgn0031907.1 204 718 +
ChrX	stalkie_big_nohaplotig	exon	10300381	10300487	100	+	.	Parent=FBgn0031907.1.mrna1;Target=FBgn0031907.1 719 825 +
ChrX	stalkie_big_nohaplotig	exon	10300544	10300675	100	+	.	Parent=FBgn0031907.1.mrna1;Target=FBgn0031907.1 826 957 +
ChrX	stalkie_big_nohaplotig	CDS	10297538	10297731	.	+	0	Parent=FBgn0031907.1.mrna1;Target=FBgn0031907.1 10 203 +
ChrX	stalkie_big_nohaplotig	CDS	10299813	10300327	.	+	1	Parent=FBgn0031907.1.mrna1;Target=FBgn0031907.1 204 718 +
ChrX	stalkie_big_nohaplotig	CDS	10300381	10300487	.	+	2	Parent=FBgn0031907.1.mrna1;Target=FBgn0031907.1 719 825 +
ChrX	stalkie_big_nohaplotig	CDS	10300544	10300675	.	+	0	Parent=FBgn0031907.1.mrna1;Target=FBgn0031907.1 826 957 +
ChrX	stalkie_big_nohaplotig	mRNA	10297708	10299834	.	-	.	ID=comp153461_c0_seq1.mrna1;geneID=comp153461_c0_seq1.path1;Name=comp153461_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=2116;mismatches=11;indels=0;unknowns=0;Target=comp153461_c0_seq1 2127 1 .;CDS_Target=comp153461_c0_seq1 1429 1259 .;locus=RLOC_00000561
ChrX	stalkie_big_nohaplotig	exon	10297708	10299834	99	-	.	Parent=comp153461_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10298406	10298576	.	-	0	Parent=comp153461_c0_seq1.mrna1
ChrX	gffcl	locus	10306800	10311910	.	-	.	ID=RLOC_00000562;geneIDs=FBgn0035833.1.path1;transcripts=FBgn0035833.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10306800	10311910	.	-	.	ID=FBgn0035833.1.mrna1;geneID=FBgn0035833.1.path1;Name=FBgn0035833.1;Dir=sensecoverage=99.2;identity=99.8;matches=3279;mismatches=6;indels=0;unknowns=0;locus=RLOC_00000562
ChrX	stalkie_big_nohaplotig	exon	10306800	10306963	99	-	.	Parent=FBgn0035833.1.mrna1;Target=FBgn0035833.1 3122 3285 +
ChrX	stalkie_big_nohaplotig	exon	10307024	10307206	100	-	.	Parent=FBgn0035833.1.mrna1;Target=FBgn0035833.1 2939 3121 +
ChrX	stalkie_big_nohaplotig	exon	10307273	10307519	100	-	.	Parent=FBgn0035833.1.mrna1;Target=FBgn0035833.1 2692 2938 +
ChrX	stalkie_big_nohaplotig	exon	10307583	10307864	100	-	.	Parent=FBgn0035833.1.mrna1;Target=FBgn0035833.1 2410 2691 +
ChrX	stalkie_big_nohaplotig	exon	10307927	10308117	100	-	.	Parent=FBgn0035833.1.mrna1;Target=FBgn0035833.1 2219 2409 +
ChrX	stalkie_big_nohaplotig	exon	10308183	10308291	100	-	.	Parent=FBgn0035833.1.mrna1;Target=FBgn0035833.1 2110 2218 +
ChrX	stalkie_big_nohaplotig	exon	10309560	10309691	98	-	.	Parent=FBgn0035833.1.mrna1;Target=FBgn0035833.1 1978 2109 +
ChrX	stalkie_big_nohaplotig	exon	10309757	10309897	100	-	.	Parent=FBgn0035833.1.mrna1;Target=FBgn0035833.1 1837 1977 +
ChrX	stalkie_big_nohaplotig	exon	10309953	10310110	100	-	.	Parent=FBgn0035833.1.mrna1;Target=FBgn0035833.1 1679 1836 +
ChrX	stalkie_big_nohaplotig	exon	10310173	10311229	99	-	.	Parent=FBgn0035833.1.mrna1;Target=FBgn0035833.1 622 1678 +
ChrX	stalkie_big_nohaplotig	exon	10311290	10311910	100	-	.	Parent=FBgn0035833.1.mrna1;Target=FBgn0035833.1 1 621 +
ChrX	stalkie_big_nohaplotig	CDS	10306800	10306963	.	-	2	Parent=FBgn0035833.1.mrna1;Target=FBgn0035833.1 3122 3285 +
ChrX	stalkie_big_nohaplotig	CDS	10307024	10307206	.	-	2	Parent=FBgn0035833.1.mrna1;Target=FBgn0035833.1 2939 3121 +
ChrX	stalkie_big_nohaplotig	CDS	10307273	10307519	.	-	0	Parent=FBgn0035833.1.mrna1;Target=FBgn0035833.1 2692 2938 +
ChrX	stalkie_big_nohaplotig	CDS	10307583	10307864	.	-	0	Parent=FBgn0035833.1.mrna1;Target=FBgn0035833.1 2410 2691 +
ChrX	stalkie_big_nohaplotig	CDS	10307927	10308117	.	-	2	Parent=FBgn0035833.1.mrna1;Target=FBgn0035833.1 2219 2409 +
ChrX	stalkie_big_nohaplotig	CDS	10308183	10308291	.	-	0	Parent=FBgn0035833.1.mrna1;Target=FBgn0035833.1 2110 2218 +
ChrX	stalkie_big_nohaplotig	CDS	10309560	10309691	.	-	0	Parent=FBgn0035833.1.mrna1;Target=FBgn0035833.1 1978 2109 +
ChrX	stalkie_big_nohaplotig	CDS	10309757	10309897	.	-	0	Parent=FBgn0035833.1.mrna1;Target=FBgn0035833.1 1837 1977 +
ChrX	stalkie_big_nohaplotig	CDS	10309953	10310110	.	-	2	Parent=FBgn0035833.1.mrna1;Target=FBgn0035833.1 1679 1836 +
ChrX	stalkie_big_nohaplotig	CDS	10310173	10311229	.	-	0	Parent=FBgn0035833.1.mrna1;Target=FBgn0035833.1 622 1678 +
ChrX	stalkie_big_nohaplotig	CDS	10311290	10311910	.	-	0	Parent=FBgn0035833.1.mrna1;Target=FBgn0035833.1 1 621 +
ChrX	gffcl	locus	10317338	10319723	.	+	.	ID=RLOC_00000563;geneIDs=ORF1535.path1;transcripts=ORF1535.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10317338	10319723	.	+	.	ID=ORF1535.mrna1;geneID=ORF1535.path1;Name=ORF1535;Dir=sensecoverage=100.0;identity=99.3;matches=1061;mismatches=7;indels=0;unknowns=0;locus=RLOC_00000563
ChrX	stalkie_big_nohaplotig	exon	10317338	10317586	99	+	.	Parent=ORF1535.mrna1;Target=ORF1535 1 249 +
ChrX	stalkie_big_nohaplotig	exon	10318905	10319723	99	+	.	Parent=ORF1535.mrna1;Target=ORF1535 250 1068 +
ChrX	stalkie_big_nohaplotig	CDS	10317338	10317586	.	+	0	Parent=ORF1535.mrna1;Target=ORF1535 1 249 +
ChrX	stalkie_big_nohaplotig	CDS	10318905	10319723	.	+	0	Parent=ORF1535.mrna1;Target=ORF1535 250 1068 +
ChrX	gffcl	locus	10322484	10322784	.	+	.	ID=RLOC_00000564;geneIDs=comp220610_c0_seq1.path1;transcripts=comp220610_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10322484	10322784	.	+	.	ID=comp220610_c0_seq1.mrna1;geneID=comp220610_c0_seq1.path1;Name=comp220610_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=301;mismatches=0;indels=0;unknowns=0;Target=comp220610_c0_seq1 301 1 .;CDS_Target=comp220610_c0_seq1 31 2 .;locus=RLOC_00000564
ChrX	stalkie_big_nohaplotig	exon	10322484	10322784	100	+	.	Parent=comp220610_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10322485	10322514	.	+	0	Parent=comp220610_c0_seq1.mrna1
ChrX	gffcl	locus	10323894	10330545	.	-	.	ID=RLOC_00000565;geneIDs=FBgn0000228.1.path1,comp74796_c0_seq1.path1;transcripts=FBgn0000228.1.mrna1,comp74796_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10323894	10330545	.	-	.	ID=FBgn0000228.1.mrna1;geneID=FBgn0000228.1.path1;Name=FBgn0000228.1;Dir=sensecoverage=100.0;identity=99.7;matches=2720;mismatches=6;indels=1;unknowns=0;Target=FBgn0000228.1 3 80 +;locus=RLOC_00000565
ChrX	stalkie_big_nohaplotig	exon	10323894	10324129	100	-	.	Parent=FBgn0000228.1.mrna1;Target=FBgn0000228.1 2492 2727 +
ChrX	stalkie_big_nohaplotig	exon	10326354	10326465	100	-	.	Parent=FBgn0000228.1.mrna1;Target=FBgn0000228.1 2380 2491 +
ChrX	stalkie_big_nohaplotig	exon	10326546	10326978	100	-	.	Parent=FBgn0000228.1.mrna1;Target=FBgn0000228.1 1947 2379 +
ChrX	stalkie_big_nohaplotig	exon	10328369	10329807	99	-	.	Parent=FBgn0000228.1.mrna1;Target=FBgn0000228.1 508 1946 +
ChrX	stalkie_big_nohaplotig	exon	10329860	10330233	100	-	.	Parent=FBgn0000228.1.mrna1;Target=FBgn0000228.1 134 507 +
ChrX	stalkie_big_nohaplotig	exon	10330414	10330545	98	-	.	Parent=FBgn0000228.1.mrna1;Target=FBgn0000228.1 1 133 +
ChrX	stalkie_big_nohaplotig	CDS	10330467	10330543	.	-	0	Parent=FBgn0000228.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10328092	10328391	.	-	.	ID=comp74796_c0_seq1.mrna1;geneID=comp74796_c0_seq1.path1;Name=comp74796_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=202;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000565
ChrX	stalkie_big_nohaplotig	exon	10328092	10328270	100	-	.	Parent=comp74796_c0_seq1.mrna1;Target=comp74796_c0_seq1 24 202 +
ChrX	stalkie_big_nohaplotig	exon	10328369	10328391	100	-	.	Parent=comp74796_c0_seq1.mrna1;Target=comp74796_c0_seq1 1 23 +
ChrX	stalkie_big_nohaplotig	CDS	10328186	10328270	.	-	1	Parent=comp74796_c0_seq1.mrna1;Target=comp74796_c0_seq1 24 108 +
ChrX	stalkie_big_nohaplotig	CDS	10328369	10328391	.	-	0	Parent=comp74796_c0_seq1.mrna1;Target=comp74796_c0_seq1 1 23 +
ChrX	gffcl	locus	10338738	10342848	.	+	.	ID=RLOC_00000566;geneIDs=FBgn0031696.1.path1;transcripts=FBgn0031696.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10338738	10342848	.	+	.	ID=FBgn0031696.1.mrna1;geneID=FBgn0031696.1.path1;Name=FBgn0031696.1;Dir=sensecoverage=100.0;identity=100.0;matches=2447;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000566
ChrX	stalkie_big_nohaplotig	exon	10338738	10340462	99	+	.	Parent=FBgn0031696.1.mrna1;Target=FBgn0031696.1 1 1725 +
ChrX	stalkie_big_nohaplotig	exon	10342126	10342848	100	+	.	Parent=FBgn0031696.1.mrna1;Target=FBgn0031696.1 1726 2448 +
ChrX	stalkie_big_nohaplotig	CDS	10338738	10340462	.	+	0	Parent=FBgn0031696.1.mrna1;Target=FBgn0031696.1 1 1725 +
ChrX	stalkie_big_nohaplotig	CDS	10342126	10342848	.	+	0	Parent=FBgn0031696.1.mrna1;Target=FBgn0031696.1 1726 2448 +
ChrX	gffcl	locus	10372782	10373262	.	-	.	ID=RLOC_00000567;geneIDs=comp135150_c0_seq1.path1;transcripts=comp135150_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10372782	10373262	.	-	.	ID=comp135150_c0_seq1.mrna1;geneID=comp135150_c0_seq1.path1;Name=comp135150_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=480;mismatches=0;indels=1;unknowns=0;Target=comp135150_c0_seq1 480 1 .;CDS_Target=comp135150_c0_seq1 92 3 .;locus=RLOC_00000567
ChrX	stalkie_big_nohaplotig	exon	10372782	10373262	99	-	.	Parent=comp135150_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10373170	10373260	.	-	0	Parent=comp135150_c0_seq1.mrna1
ChrX	gffcl	locus	10395888	10396650	.	-	.	ID=RLOC_00000568;geneIDs=comp134478_c1_seq1.path1;transcripts=comp134478_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10395888	10396650	.	-	.	ID=comp134478_c1_seq1.mrna1;geneID=comp134478_c1_seq1.path1;Name=comp134478_c1_seq1;Dir=indeterminatecoverage=100.0;identity=95.2;matches=736;mismatches=3;indels=34;unknowns=0;Target=comp134478_c1_seq1 749 1 .;CDS_Target=comp134478_c1_seq1 248 3 .;locus=RLOC_00000568
ChrX	stalkie_big_nohaplotig	exon	10395888	10396650	95	-	.	Parent=comp134478_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10396379	10396648	.	-	0	Parent=comp134478_c1_seq1.mrna1
ChrX	gffcl	locus	10397112	10397323	.	+	.	ID=RLOC_00000569;geneIDs=comp135917_c0_seq1.path1;transcripts=comp135917_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10397112	10397323	.	+	.	ID=comp135917_c0_seq1.mrna1;geneID=comp135917_c0_seq1.path1;Name=comp135917_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=212;mismatches=0;indels=0;unknowns=0;Target=comp135917_c0_seq1 212 1 .;CDS_Target=comp135917_c0_seq1 210 109 .;locus=RLOC_00000569
ChrX	stalkie_big_nohaplotig	exon	10397112	10397323	100	+	.	Parent=comp135917_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10397220	10397321	.	+	0	Parent=comp135917_c0_seq1.mrna1
ChrX	gffcl	locus	10400638	10403171	.	+	.	ID=RLOC_00000570;geneIDs=FBgn0016076.1.path1;transcripts=FBgn0016076.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10400638	10403171	.	+	.	ID=FBgn0016076.1.mrna1;geneID=FBgn0016076.1.path1;Name=FBgn0016076.1;Dir=sensecoverage=99.9;identity=100.0;matches=2426;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000570
ChrX	stalkie_big_nohaplotig	exon	10400638	10401034	100	+	.	Parent=FBgn0016076.1.mrna1;Target=FBgn0016076.1 4 400 +
ChrX	stalkie_big_nohaplotig	exon	10401142	10403171	99	+	.	Parent=FBgn0016076.1.mrna1;Target=FBgn0016076.1 401 2430 +
ChrX	stalkie_big_nohaplotig	CDS	10400638	10401034	.	+	0	Parent=FBgn0016076.1.mrna1;Target=FBgn0016076.1 4 400 +
ChrX	stalkie_big_nohaplotig	CDS	10401142	10403171	.	+	2	Parent=FBgn0016076.1.mrna1;Target=FBgn0016076.1 401 2430 +
ChrX	gffcl	locus	10403950	10404234	.	+	.	ID=RLOC_00000571;geneIDs=comp97766_c0_seq1.path1;transcripts=comp97766_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10403950	10404234	.	+	.	ID=comp97766_c0_seq1.mrna1;geneID=comp97766_c0_seq1.path1;Name=comp97766_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=283;mismatches=2;indels=0;unknowns=0;Target=comp97766_c0_seq1 285 1 .;CDS_Target=comp97766_c0_seq1 243 160 .;locus=RLOC_00000571
ChrX	stalkie_big_nohaplotig	exon	10403950	10404234	99	+	.	Parent=comp97766_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10404109	10404192	.	+	0	Parent=comp97766_c0_seq1.mrna1
ChrX	gffcl	locus	10409022	10426553	.	-	.	ID=RLOC_00000572;geneIDs=FBgn0031893.1.path1,comp70207_c0_seq1.path1;transcripts=FBgn0031893.1.mrna1,comp70207_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10409022	10426553	.	-	.	ID=FBgn0031893.1.mrna1;geneID=FBgn0031893.1.path1;Name=FBgn0031893.1;Dir=sensecoverage=100.0;identity=99.8;matches=1515;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000572
ChrX	stalkie_big_nohaplotig	exon	10409022	10409173	99	-	.	Parent=FBgn0031893.1.mrna1;Target=FBgn0031893.1 1367 1518 +
ChrX	stalkie_big_nohaplotig	exon	10409231	10409690	99	-	.	Parent=FBgn0031893.1.mrna1;Target=FBgn0031893.1 907 1366 +
ChrX	stalkie_big_nohaplotig	exon	10412255	10412415	100	-	.	Parent=FBgn0031893.1.mrna1;Target=FBgn0031893.1 746 906 +
ChrX	stalkie_big_nohaplotig	exon	10422175	10422289	100	-	.	Parent=FBgn0031893.1.mrna1;Target=FBgn0031893.1 631 745 +
ChrX	stalkie_big_nohaplotig	exon	10424850	10424887	100	-	.	Parent=FBgn0031893.1.mrna1;Target=FBgn0031893.1 593 630 +
ChrX	stalkie_big_nohaplotig	exon	10425774	10425933	100	-	.	Parent=FBgn0031893.1.mrna1;Target=FBgn0031893.1 433 592 +
ChrX	stalkie_big_nohaplotig	exon	10426048	10426219	100	-	.	Parent=FBgn0031893.1.mrna1;Target=FBgn0031893.1 261 432 +
ChrX	stalkie_big_nohaplotig	exon	10426294	10426553	100	-	.	Parent=FBgn0031893.1.mrna1;Target=FBgn0031893.1 1 260 +
ChrX	stalkie_big_nohaplotig	CDS	10409022	10409173	.	-	2	Parent=FBgn0031893.1.mrna1;Target=FBgn0031893.1 1367 1518 +
ChrX	stalkie_big_nohaplotig	CDS	10409231	10409690	.	-	0	Parent=FBgn0031893.1.mrna1;Target=FBgn0031893.1 907 1366 +
ChrX	stalkie_big_nohaplotig	CDS	10412255	10412415	.	-	2	Parent=FBgn0031893.1.mrna1;Target=FBgn0031893.1 746 906 +
ChrX	stalkie_big_nohaplotig	CDS	10422175	10422289	.	-	0	Parent=FBgn0031893.1.mrna1;Target=FBgn0031893.1 631 745 +
ChrX	stalkie_big_nohaplotig	CDS	10424850	10424887	.	-	2	Parent=FBgn0031893.1.mrna1;Target=FBgn0031893.1 593 630 +
ChrX	stalkie_big_nohaplotig	CDS	10425774	10425933	.	-	0	Parent=FBgn0031893.1.mrna1;Target=FBgn0031893.1 433 592 +
ChrX	stalkie_big_nohaplotig	CDS	10426048	10426219	.	-	1	Parent=FBgn0031893.1.mrna1;Target=FBgn0031893.1 261 432 +
ChrX	stalkie_big_nohaplotig	CDS	10426294	10426553	.	-	0	Parent=FBgn0031893.1.mrna1;Target=FBgn0031893.1 1 260 +
ChrX	stalkie_big_nohaplotig	mRNA	10422271	10424871	.	-	.	ID=comp70207_c0_seq1.mrna1;geneID=comp70207_c0_seq1.path1;Name=comp70207_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=321;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000572
ChrX	stalkie_big_nohaplotig	exon	10422271	10422289	100	-	.	Parent=comp70207_c0_seq1.mrna1;Target=comp70207_c0_seq1 303 321 +
ChrX	stalkie_big_nohaplotig	exon	10423000	10423279	100	-	.	Parent=comp70207_c0_seq1.mrna1;Target=comp70207_c0_seq1 23 302 +
ChrX	stalkie_big_nohaplotig	exon	10424850	10424871	100	-	.	Parent=comp70207_c0_seq1.mrna1;Target=comp70207_c0_seq1 1 22 +
ChrX	stalkie_big_nohaplotig	CDS	10423181	10423279	.	-	0	Parent=comp70207_c0_seq1.mrna1;Target=comp70207_c0_seq1 23 121 +
ChrX	stalkie_big_nohaplotig	CDS	10424850	10424870	.	-	0	Parent=comp70207_c0_seq1.mrna1;Target=comp70207_c0_seq1 2 22 +
ChrX	gffcl	locus	10409966	10410409	.	+	.	ID=RLOC_00000573;geneIDs=comp139756_c1_seq1.path1;transcripts=comp139756_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10409966	10410409	.	+	.	ID=comp139756_c1_seq1.mrna1;geneID=comp139756_c1_seq1.path1;Name=comp139756_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=440;mismatches=4;indels=0;unknowns=0;Target=comp139756_c1_seq1 444 1 .;CDS_Target=comp139756_c1_seq1 80 3 .;locus=RLOC_00000573
ChrX	stalkie_big_nohaplotig	exon	10409966	10410409	99	+	.	Parent=comp139756_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10409968	10410045	.	+	0	Parent=comp139756_c1_seq1.mrna1
ChrX	gffcl	locus	10416179	10419401	.	+	.	ID=RLOC_00000574;geneIDs=FBgn0031697.1.path1;transcripts=FBgn0031697.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10416179	10419401	.	+	.	ID=FBgn0031697.1.mrna1;geneID=FBgn0031697.1.path1;Name=FBgn0031697.1;Dir=sensecoverage=100.0;identity=99.9;matches=1345;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000574
ChrX	stalkie_big_nohaplotig	exon	10416179	10416394	100	+	.	Parent=FBgn0031697.1.mrna1;Target=FBgn0031697.1 1 216 +
ChrX	stalkie_big_nohaplotig	exon	10418044	10418392	99	+	.	Parent=FBgn0031697.1.mrna1;Target=FBgn0031697.1 217 565 +
ChrX	stalkie_big_nohaplotig	exon	10418549	10419092	99	+	.	Parent=FBgn0031697.1.mrna1;Target=FBgn0031697.1 566 1109 +
ChrX	stalkie_big_nohaplotig	exon	10419164	10419401	100	+	.	Parent=FBgn0031697.1.mrna1;Target=FBgn0031697.1 1110 1347 +
ChrX	stalkie_big_nohaplotig	CDS	10416179	10416394	.	+	0	Parent=FBgn0031697.1.mrna1;Target=FBgn0031697.1 1 216 +
ChrX	stalkie_big_nohaplotig	CDS	10418044	10418392	.	+	0	Parent=FBgn0031697.1.mrna1;Target=FBgn0031697.1 217 565 +
ChrX	stalkie_big_nohaplotig	CDS	10418549	10419092	.	+	2	Parent=FBgn0031697.1.mrna1;Target=FBgn0031697.1 566 1109 +
ChrX	stalkie_big_nohaplotig	CDS	10419164	10419401	.	+	1	Parent=FBgn0031697.1.mrna1;Target=FBgn0031697.1 1110 1347 +
ChrX	gffcl	locus	10419543	10420300	.	+	.	ID=RLOC_00000575;geneIDs=comp145789_c0_seq1.path1;transcripts=comp145789_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10419543	10420300	.	+	.	ID=comp145789_c0_seq1.mrna1;geneID=comp145789_c0_seq1.path1;Name=comp145789_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=757;mismatches=1;indels=0;unknowns=0;Target=comp145789_c0_seq1 758 1 .;CDS_Target=comp145789_c0_seq1 60 1 .;locus=RLOC_00000575
ChrX	stalkie_big_nohaplotig	exon	10419543	10420300	99	+	.	Parent=comp145789_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10419543	10419602	.	+	0	Parent=comp145789_c0_seq1.mrna1
ChrX	gffcl	locus	10427773	10429247	.	+	.	ID=RLOC_00000576;geneIDs=comp154621_c0_seq1.path1;transcripts=comp154621_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10427773	10429247	.	+	.	ID=comp154621_c0_seq1.mrna1;geneID=comp154621_c0_seq1.path1;Name=comp154621_c0_seq1;Dir=sensecoverage=91.8;identity=99.0;matches=1345;mismatches=12;indels=1;unknowns=0;locus=RLOC_00000576
ChrX	stalkie_big_nohaplotig	exon	10427773	10428389	99	+	.	Parent=comp154621_c0_seq1.mrna1;Target=comp154621_c0_seq1 122 738 +
ChrX	stalkie_big_nohaplotig	exon	10428454	10428610	97	+	.	Parent=comp154621_c0_seq1.mrna1;Target=comp154621_c0_seq1 739 896 +
ChrX	stalkie_big_nohaplotig	exon	10428665	10429247	98	+	.	Parent=comp154621_c0_seq1.mrna1;Target=comp154621_c0_seq1 897 1479 +
ChrX	stalkie_big_nohaplotig	CDS	10428257	10428389	.	+	0	Parent=comp154621_c0_seq1.mrna1;Target=comp154621_c0_seq1 606 738 +
ChrX	stalkie_big_nohaplotig	CDS	10428454	10428553	.	+	2	Parent=comp154621_c0_seq1.mrna1;Target=comp154621_c0_seq1 739 839 +
ChrX	stalkie_big_nohaplotig	mRNA	10429793	10602920	.	-	.	ID=FBgn0263289.1.mrna1;geneID=FBgn0263289.1.path1;Name=FBgn0263289.1;Dir=indeterminatecoverage=81.4;identity=97.8;matches=7720;mismatches=85;indels=89;unknowns=0;locus=RLOC_00000577
ChrX	stalkie_big_nohaplotig	exon	10429793	10429808	81	-	.	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 8370 8355 .
ChrX	stalkie_big_nohaplotig	exon	10435039	10435085	42	-	.	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 8354 8332 .
ChrX	stalkie_big_nohaplotig	exon	10438364	10438367	100	-	.	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 8308 8305 .
ChrX	stalkie_big_nohaplotig	exon	10464140	10464148	88	-	.	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 8304 8296 .
ChrX	stalkie_big_nohaplotig	exon	10468763	10468768	100	-	.	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 8295 8290 .
ChrX	stalkie_big_nohaplotig	exon	10472267	10472279	76	-	.	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 8289 8277 .
ChrX	stalkie_big_nohaplotig	exon	10473224	10473229	100	-	.	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 8276 8271 .
ChrX	stalkie_big_nohaplotig	exon	10482178	10482265	50	-	.	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 8270 8174 .
ChrX	stalkie_big_nohaplotig	exon	10483524	10483534	100	-	.	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 8138 8128 .
ChrX	stalkie_big_nohaplotig	exon	10483536	10483545	100	-	.	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 8068 8059 .
ChrX	stalkie_big_nohaplotig	exon	10493078	10493084	100	-	.	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 7782 7776 .
ChrX	stalkie_big_nohaplotig	exon	10542826	10542851	44	-	.	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 7744 7700 .
ChrX	stalkie_big_nohaplotig	exon	10559315	10559369	59	-	.	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 7679 7618 .
ChrX	stalkie_big_nohaplotig	exon	10582926	10582933	100	-	.	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 7587 7580 .
ChrX	stalkie_big_nohaplotig	exon	10584727	10584741	39	-	.	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 7576 7554 .
ChrX	stalkie_big_nohaplotig	exon	10593139	10593146	100	-	.	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 7547 7540 .
ChrX	stalkie_big_nohaplotig	exon	10593150	10593166	94	-	.	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 7506 7490 .
ChrX	stalkie_big_nohaplotig	exon	10593230	10600492	99	-	.	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 7489 227 .
ChrX	stalkie_big_nohaplotig	exon	10602695	10602920	96	-	.	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 226 1 .
ChrX	stalkie_big_nohaplotig	CDS	10429793	10429808	.	-	2	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 8370 8355 .
ChrX	stalkie_big_nohaplotig	CDS	10435039	10435085	.	-	1	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 8354 8332 .
ChrX	stalkie_big_nohaplotig	CDS	10438364	10438367	.	-	2	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 8308 8305 .
ChrX	stalkie_big_nohaplotig	CDS	10464140	10464148	.	-	2	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 8304 8296 .
ChrX	stalkie_big_nohaplotig	CDS	10468763	10468768	.	-	2	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 8295 8290 .
ChrX	stalkie_big_nohaplotig	CDS	10472267	10472279	.	-	0	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 8289 8277 .
ChrX	stalkie_big_nohaplotig	CDS	10473224	10473229	.	-	0	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 8276 8271 .
ChrX	stalkie_big_nohaplotig	CDS	10482178	10482265	.	-	1	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 8270 8174 .
ChrX	stalkie_big_nohaplotig	CDS	10483524	10483534	.	-	0	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 8138 8128 .
ChrX	stalkie_big_nohaplotig	CDS	10483536	10483545	.	-	1	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 8068 8059 .
ChrX	stalkie_big_nohaplotig	CDS	10493078	10493084	.	-	2	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 7782 7776 .
ChrX	stalkie_big_nohaplotig	CDS	10542826	10542851	.	-	1	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 7744 7700 .
ChrX	stalkie_big_nohaplotig	CDS	10559315	10559369	.	-	2	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 7679 7618 .
ChrX	stalkie_big_nohaplotig	CDS	10582926	10582933	.	-	1	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 7587 7580 .
ChrX	stalkie_big_nohaplotig	CDS	10584727	10584741	.	-	1	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 7576 7554 .
ChrX	stalkie_big_nohaplotig	CDS	10593139	10593146	.	-	0	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 7547 7540 .
ChrX	stalkie_big_nohaplotig	CDS	10593150	10593166	.	-	2	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 7506 7490 .
ChrX	stalkie_big_nohaplotig	CDS	10593230	10600492	.	-	2	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 7489 227 .
ChrX	stalkie_big_nohaplotig	CDS	10602695	10602920	.	-	0	Parent=FBgn0263289.1.mrna1;Target=FBgn0263289.1 226 1 .
ChrX	stalkie_big_nohaplotig	mRNA	10568837	10570126	.	-	.	ID=comp152777_c1_seq1.mrna1;geneID=comp152777_c1_seq1.path1;Name=comp152777_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1289;mismatches=1;indels=8;unknowns=0;Target=comp152777_c1_seq1 1298 1 .;CDS_Target=comp152777_c1_seq1 971 858 .;locus=RLOC_00000577
ChrX	stalkie_big_nohaplotig	exon	10568837	10570126	99	-	.	Parent=comp152777_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10569156	10569269	.	-	0	Parent=comp152777_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10571176	10571815	.	+	.	ID=comp110674_c0_seq1.mrna1;geneID=comp110674_c0_seq1.path1;Name=comp110674_c0_seq1;Dir=indeterminatecoverage=92.1;identity=99.8;matches=639;mismatches=1;indels=0;unknowns=0;Target=comp110674_c0_seq1 695 56 .;CDS_Target=comp110674_c0_seq1 669 478 .;locus=RLOC_00000577
ChrX	stalkie_big_nohaplotig	exon	10571176	10571815	99	+	.	Parent=comp110674_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10571598	10571789	.	+	0	Parent=comp110674_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10577761	10578453	.	+	.	ID=comp87716_c0_seq1.mrna1;geneID=comp87716_c0_seq1.path1;Name=comp87716_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=690;mismatches=3;indels=0;unknowns=0;Target=comp87716_c0_seq1 693 1 .;CDS_Target=comp87716_c0_seq1 210 1 .;locus=RLOC_00000577
ChrX	stalkie_big_nohaplotig	exon	10577761	10578453	99	+	.	Parent=comp87716_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10577761	10577970	.	+	0	Parent=comp87716_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10495897	10600690	.	+	.	ID=comp163853_c1_seq1.mrna1;geneID=comp163853_c1_seq1.path1;Name=comp163853_c1_seq1;Dir=sensecoverage=67.9;identity=98.1;matches=7620;mismatches=101;indels=46;unknowns=0;Target=comp163853_c1_seq1 6091 6597 +;locus=RLOC_00000578
ChrX	stalkie_big_nohaplotig	exon	10495897	10495904	100	+	.	Parent=comp163853_c1_seq1.mrna1;Target=comp163853_c1_seq1 3701 3708 +
ChrX	stalkie_big_nohaplotig	exon	10495915	10495922	100	+	.	Parent=comp163853_c1_seq1.mrna1;Target=comp163853_c1_seq1 3742 3749 +
ChrX	stalkie_big_nohaplotig	exon	10503786	10503800	86	+	.	Parent=comp163853_c1_seq1.mrna1;Target=comp163853_c1_seq1 3819 3832 +
ChrX	stalkie_big_nohaplotig	exon	10511408	10511460	55	+	.	Parent=comp163853_c1_seq1.mrna1;Target=comp163853_c1_seq1 3833 3891 +
ChrX	stalkie_big_nohaplotig	exon	10523467	10523475	100	+	.	Parent=comp163853_c1_seq1.mrna1;Target=comp163853_c1_seq1 3899 3907 +
ChrX	stalkie_big_nohaplotig	exon	10534050	10534057	100	+	.	Parent=comp163853_c1_seq1.mrna1;Target=comp163853_c1_seq1 4006 4013 +
ChrX	stalkie_big_nohaplotig	exon	10538574	10538575	100	+	.	Parent=comp163853_c1_seq1.mrna1;Target=comp163853_c1_seq1 4029 4030 +
ChrX	stalkie_big_nohaplotig	exon	10539907	10539908	100	+	.	Parent=comp163853_c1_seq1.mrna1;Target=comp163853_c1_seq1 4031 4032 +
ChrX	stalkie_big_nohaplotig	exon	10542825	10542866	49	+	.	Parent=comp163853_c1_seq1.mrna1;Target=comp163853_c1_seq1 4033 4093 +
ChrX	stalkie_big_nohaplotig	exon	10552156	10552167	91	+	.	Parent=comp163853_c1_seq1.mrna1;Target=comp163853_c1_seq1 4094 4105 +
ChrX	stalkie_big_nohaplotig	exon	10559322	10559369	54	+	.	Parent=comp163853_c1_seq1.mrna1;Target=comp163853_c1_seq1 4106 4160 +
ChrX	stalkie_big_nohaplotig	exon	10581249	10581275	50	+	.	Parent=comp163853_c1_seq1.mrna1;Target=comp163853_c1_seq1 4161 4192 +
ChrX	stalkie_big_nohaplotig	exon	10583656	10583663	100	+	.	Parent=comp163853_c1_seq1.mrna1;Target=comp163853_c1_seq1 4195 4202 +
ChrX	stalkie_big_nohaplotig	exon	10583689	10583696	100	+	.	Parent=comp163853_c1_seq1.mrna1;Target=comp163853_c1_seq1 4246 4253 +
ChrX	stalkie_big_nohaplotig	exon	10593155	10593162	100	+	.	Parent=comp163853_c1_seq1.mrna1;Target=comp163853_c1_seq1 4277 4284 +
ChrX	stalkie_big_nohaplotig	exon	10593226	10600690	99	+	.	Parent=comp163853_c1_seq1.mrna1;Target=comp163853_c1_seq1 4285 11749 +
ChrX	stalkie_big_nohaplotig	CDS	10595032	10595538	.	+	0	Parent=comp163853_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10542309	10554610	.	+	.	ID=FBgn0085407.1.mrna1;geneID=FBgn0085407.1.path1;Name=FBgn0085407.1;Dir=sensecoverage=99.9;identity=99.7;matches=1315;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000578
ChrX	stalkie_big_nohaplotig	exon	10542309	10542742	99	+	.	Parent=FBgn0085407.1.mrna1;Target=FBgn0085407.1 2 435 +
ChrX	stalkie_big_nohaplotig	exon	10549367	10549520	100	+	.	Parent=FBgn0085407.1.mrna1;Target=FBgn0085407.1 436 589 +
ChrX	stalkie_big_nohaplotig	exon	10552162	10552385	99	+	.	Parent=FBgn0085407.1.mrna1;Target=FBgn0085407.1 590 813 +
ChrX	stalkie_big_nohaplotig	exon	10553608	10553987	100	+	.	Parent=FBgn0085407.1.mrna1;Target=FBgn0085407.1 814 1193 +
ChrX	stalkie_big_nohaplotig	exon	10554484	10554610	99	+	.	Parent=FBgn0085407.1.mrna1;Target=FBgn0085407.1 1194 1320 +
ChrX	stalkie_big_nohaplotig	CDS	10542311	10542742	.	+	0	Parent=FBgn0085407.1.mrna1;Target=FBgn0085407.1 4 435 +
ChrX	stalkie_big_nohaplotig	CDS	10549367	10549520	.	+	0	Parent=FBgn0085407.1.mrna1;Target=FBgn0085407.1 436 589 +
ChrX	stalkie_big_nohaplotig	CDS	10552162	10552385	.	+	2	Parent=FBgn0085407.1.mrna1;Target=FBgn0085407.1 590 813 +
ChrX	stalkie_big_nohaplotig	CDS	10553608	10553987	.	+	0	Parent=FBgn0085407.1.mrna1;Target=FBgn0085407.1 814 1193 +
ChrX	stalkie_big_nohaplotig	CDS	10554484	10554610	.	+	1	Parent=FBgn0085407.1.mrna1;Target=FBgn0085407.1 1194 1320 +
ChrX	gffcl	locus	10541852	10542079	.	+	.	ID=RLOC_00000579;geneIDs=comp75509_c0_seq1.path1;transcripts=comp75509_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10541852	10542079	.	+	.	ID=comp75509_c0_seq1.mrna1;geneID=comp75509_c0_seq1.path1;Name=comp75509_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=228;mismatches=0;indels=0;unknowns=0;Target=comp75509_c0_seq1 228 1 .;locus=RLOC_00000579
ChrX	stalkie_big_nohaplotig	exon	10541852	10542079	100	+	.	Parent=comp75509_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10541852	10542079	.	+	0	Parent=comp75509_c0_seq1.mrna1
ChrX	gffcl	locus	10566776	10567024	.	-	.	ID=RLOC_00000581;geneIDs=comp49342_c0_seq1.path1;transcripts=comp49342_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10566776	10567024	.	-	.	ID=comp49342_c0_seq1.mrna1;geneID=comp49342_c0_seq1.path1;Name=comp49342_c0_seq1;Dir=indeterminatecoverage=99.2;identity=100.0;matches=249;mismatches=0;indels=0;unknowns=0;Target=comp49342_c0_seq1 249 1 .;locus=RLOC_00000581
ChrX	stalkie_big_nohaplotig	exon	10566776	10567024	100	-	.	Parent=comp49342_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10566776	10567024	.	-	0	Parent=comp49342_c0_seq1.mrna1
ChrX	gffcl	locus	10591645	10591936	.	+	.	ID=RLOC_00000582;geneIDs=comp289434_c0_seq1.path1;transcripts=comp289434_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10591645	10591936	.	+	.	ID=comp289434_c0_seq1.mrna1;geneID=comp289434_c0_seq1.path1;Name=comp289434_c0_seq1;Dir=indeterminatecoverage=94.8;identity=100.0;matches=292;mismatches=0;indels=0;unknowns=0;Target=comp289434_c0_seq1 308 17 .;CDS_Target=comp289434_c0_seq1 308 258 .;locus=RLOC_00000582
ChrX	stalkie_big_nohaplotig	exon	10591645	10591936	100	+	.	Parent=comp289434_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10591886	10591936	.	+	0	Parent=comp289434_c0_seq1.mrna1
ChrX	gffcl	locus	10617894	10705629	.	-	.	ID=RLOC_00000583;geneIDs=comp69714_c0_seq1.path1,comp163579_c0_seq1.path1;transcripts=comp163579_c0_seq1.mrna1,comp69714_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10617894	10705629	.	-	.	ID=comp163579_c0_seq1.mrna1;geneID=comp163579_c0_seq1.path1;Name=comp163579_c0_seq1;Dir=sensecoverage=99.8;identity=99.9;matches=24476;mismatches=29;indels=2;unknowns=0;locus=RLOC_00000583
ChrX	stalkie_big_nohaplotig	exon	10617894	10618372	99	-	.	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 24039 24517 +
ChrX	stalkie_big_nohaplotig	exon	10621543	10621803	100	-	.	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 23778 24038 +
ChrX	stalkie_big_nohaplotig	exon	10622003	10622215	99	-	.	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 23564 23777 +
ChrX	stalkie_big_nohaplotig	exon	10622562	10623531	100	-	.	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 22594 23563 +
ChrX	stalkie_big_nohaplotig	exon	10634509	10634660	100	-	.	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 22442 22593 +
ChrX	stalkie_big_nohaplotig	exon	10636948	10637253	99	-	.	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 22136 22441 +
ChrX	stalkie_big_nohaplotig	exon	10643240	10646022	99	-	.	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 19352 22135 +
ChrX	stalkie_big_nohaplotig	exon	10646106	10646343	100	-	.	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 19114 19351 +
ChrX	stalkie_big_nohaplotig	exon	10649446	10649619	99	-	.	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 18940 19113 +
ChrX	stalkie_big_nohaplotig	exon	10649697	10650665	99	-	.	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 17971 18939 +
ChrX	stalkie_big_nohaplotig	exon	10650735	10650895	98	-	.	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 17810 17970 +
ChrX	stalkie_big_nohaplotig	exon	10650957	10651110	100	-	.	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 17656 17809 +
ChrX	stalkie_big_nohaplotig	exon	10652009	10665208	99	-	.	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 4456 17655 +
ChrX	stalkie_big_nohaplotig	exon	10665449	10668055	99	-	.	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 1849 4455 +
ChrX	stalkie_big_nohaplotig	exon	10668125	10668401	100	-	.	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 1572 1848 +
ChrX	stalkie_big_nohaplotig	exon	10668468	10668631	100	-	.	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 1408 1571 +
ChrX	stalkie_big_nohaplotig	exon	10670902	10671174	100	-	.	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 1135 1407 +
ChrX	stalkie_big_nohaplotig	exon	10672397	10672458	100	-	.	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 1073 1134 +
ChrX	stalkie_big_nohaplotig	exon	10700015	10700910	100	-	.	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 177 1072 +
ChrX	stalkie_big_nohaplotig	exon	10705464	10705629	100	-	.	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 11 176 +
ChrX	stalkie_big_nohaplotig	CDS	10643988	10646022	.	-	2	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 19352 21387 +
ChrX	stalkie_big_nohaplotig	CDS	10646106	10646343	.	-	0	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 19114 19351 +
ChrX	stalkie_big_nohaplotig	CDS	10649446	10649619	.	-	0	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 18940 19113 +
ChrX	stalkie_big_nohaplotig	CDS	10649697	10650665	.	-	0	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 17971 18939 +
ChrX	stalkie_big_nohaplotig	CDS	10650735	10650895	.	-	2	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 17810 17970 +
ChrX	stalkie_big_nohaplotig	CDS	10650957	10651110	.	-	0	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 17656 17809 +
ChrX	stalkie_big_nohaplotig	CDS	10652009	10665208	.	-	0	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 4456 17655 +
ChrX	stalkie_big_nohaplotig	CDS	10665449	10668055	.	-	0	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 1849 4455 +
ChrX	stalkie_big_nohaplotig	CDS	10668125	10668401	.	-	1	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 1572 1848 +
ChrX	stalkie_big_nohaplotig	CDS	10668468	10668631	.	-	0	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 1408 1571 +
ChrX	stalkie_big_nohaplotig	CDS	10670902	10671174	.	-	0	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 1135 1407 +
ChrX	stalkie_big_nohaplotig	CDS	10672397	10672458	.	-	2	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 1073 1134 +
ChrX	stalkie_big_nohaplotig	CDS	10700015	10700810	.	-	0	Parent=comp163579_c0_seq1.mrna1;Target=comp163579_c0_seq1 277 1072 +
ChrX	stalkie_big_nohaplotig	mRNA	10646322	10649469	.	-	.	ID=comp69714_c0_seq1.mrna1;geneID=comp69714_c0_seq1.path1;Name=comp69714_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=237;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000583
ChrX	stalkie_big_nohaplotig	exon	10646322	10646343	100	-	.	Parent=comp69714_c0_seq1.mrna1;Target=comp69714_c0_seq1 1 22 -
ChrX	stalkie_big_nohaplotig	exon	10648937	10649128	99	-	.	Parent=comp69714_c0_seq1.mrna1;Target=comp69714_c0_seq1 23 214 -
ChrX	stalkie_big_nohaplotig	exon	10649446	10649469	100	-	.	Parent=comp69714_c0_seq1.mrna1;Target=comp69714_c0_seq1 215 238 -
ChrX	stalkie_big_nohaplotig	CDS	10646323	10646343	.	-	0	Parent=comp69714_c0_seq1.mrna1;Target=comp69714_c0_seq1 2 22 .
ChrX	stalkie_big_nohaplotig	CDS	10648937	10649128	.	-	0	Parent=comp69714_c0_seq1.mrna1;Target=comp69714_c0_seq1 23 214 .
ChrX	stalkie_big_nohaplotig	CDS	10649446	10649469	.	-	0	Parent=comp69714_c0_seq1.mrna1;Target=comp69714_c0_seq1 215 238 .
ChrX	gffcl	locus	10623705	10624132	.	+	.	ID=RLOC_00000584;geneIDs=comp642570_c0_seq1.path1;transcripts=comp642570_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10623705	10624132	.	+	.	ID=comp642570_c0_seq1.mrna1;geneID=comp642570_c0_seq1.path1;Name=comp642570_c0_seq1;Dir=sensecoverage=98.2;identity=98.5;matches=320;mismatches=1;indels=4;unknowns=0;Target=comp642570_c0_seq1 7 12 +;locus=RLOC_00000584
ChrX	stalkie_big_nohaplotig	exon	10623705	10623977	98	+	.	Parent=comp642570_c0_seq1.mrna1;Target=comp642570_c0_seq1 7 275 +
ChrX	stalkie_big_nohaplotig	exon	10624081	10624132	100	+	.	Parent=comp642570_c0_seq1.mrna1;Target=comp642570_c0_seq1 276 327 +
ChrX	stalkie_big_nohaplotig	CDS	10623705	10623711	.	+	0	Parent=comp642570_c0_seq1.mrna1
ChrX	gffcl	locus	10714336	10718156	.	+	.	ID=RLOC_00000585;geneIDs=FBgn0005616.1.path1;transcripts=FBgn0005616.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10714336	10718156	.	+	.	ID=FBgn0005616.1.mrna1;geneID=FBgn0005616.1.path1;Name=FBgn0005616.1;Dir=sensecoverage=100.0;identity=99.5;matches=2714;mismatches=7;indels=6;unknowns=0;locus=RLOC_00000585
ChrX	stalkie_big_nohaplotig	exon	10714336	10714415	100	+	.	Parent=FBgn0005616.1.mrna1;Target=FBgn0005616.1 1 80 +
ChrX	stalkie_big_nohaplotig	exon	10714473	10715784	99	+	.	Parent=FBgn0005616.1.mrna1;Target=FBgn0005616.1 81 1398 +
ChrX	stalkie_big_nohaplotig	exon	10716760	10717429	99	+	.	Parent=FBgn0005616.1.mrna1;Target=FBgn0005616.1 1399 2068 +
ChrX	stalkie_big_nohaplotig	exon	10717498	10718156	99	+	.	Parent=FBgn0005616.1.mrna1;Target=FBgn0005616.1 2069 2727 +
ChrX	stalkie_big_nohaplotig	CDS	10714336	10714415	.	+	0	Parent=FBgn0005616.1.mrna1;Target=FBgn0005616.1 1 80 +
ChrX	stalkie_big_nohaplotig	CDS	10714473	10715784	.	+	1	Parent=FBgn0005616.1.mrna1;Target=FBgn0005616.1 81 1398 +
ChrX	stalkie_big_nohaplotig	CDS	10716760	10717429	.	+	0	Parent=FBgn0005616.1.mrna1;Target=FBgn0005616.1 1399 2068 +
ChrX	stalkie_big_nohaplotig	CDS	10717498	10718156	.	+	2	Parent=FBgn0005616.1.mrna1;Target=FBgn0005616.1 2069 2727 +
ChrX	gffcl	locus	10724382	10725883	.	+	.	ID=RLOC_00000586;geneIDs=FBgn0031538.1.path1;transcripts=FBgn0031538.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10724382	10725883	.	+	.	ID=FBgn0031538.1.mrna1;geneID=FBgn0031538.1.path1;Name=FBgn0031538.1;Dir=sensecoverage=100.0;identity=99.9;matches=1351;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000586
ChrX	stalkie_big_nohaplotig	exon	10724382	10724469	100	+	.	Parent=FBgn0031538.1.mrna1;Target=FBgn0031538.1 1 88 +
ChrX	stalkie_big_nohaplotig	exon	10724537	10724808	100	+	.	Parent=FBgn0031538.1.mrna1;Target=FBgn0031538.1 89 360 +
ChrX	stalkie_big_nohaplotig	exon	10724891	10725883	99	+	.	Parent=FBgn0031538.1.mrna1;Target=FBgn0031538.1 361 1353 +
ChrX	stalkie_big_nohaplotig	CDS	10724382	10724469	.	+	0	Parent=FBgn0031538.1.mrna1;Target=FBgn0031538.1 1 88 +
ChrX	stalkie_big_nohaplotig	CDS	10724537	10724808	.	+	2	Parent=FBgn0031538.1.mrna1;Target=FBgn0031538.1 89 360 +
ChrX	stalkie_big_nohaplotig	CDS	10724891	10725883	.	+	0	Parent=FBgn0031538.1.mrna1;Target=FBgn0031538.1 361 1353 +
ChrX	gffcl	locus	10726144	10729528	.	-	.	ID=RLOC_00000587;geneIDs=FBgn0031537.1.path1;transcripts=FBgn0031537.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10726144	10729528	.	-	.	ID=FBgn0031537.1.mrna1;geneID=FBgn0031537.1.path1;Name=FBgn0031537.1;Dir=sensecoverage=100.0;identity=99.9;matches=2727;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000587
ChrX	stalkie_big_nohaplotig	exon	10726144	10726279	100	-	.	Parent=FBgn0031537.1.mrna1;Target=FBgn0031537.1 2595 2730 +
ChrX	stalkie_big_nohaplotig	exon	10726346	10726762	100	-	.	Parent=FBgn0031537.1.mrna1;Target=FBgn0031537.1 2178 2594 +
ChrX	stalkie_big_nohaplotig	exon	10726822	10727118	100	-	.	Parent=FBgn0031537.1.mrna1;Target=FBgn0031537.1 1881 2177 +
ChrX	stalkie_big_nohaplotig	exon	10727192	10727631	100	-	.	Parent=FBgn0031537.1.mrna1;Target=FBgn0031537.1 1441 1880 +
ChrX	stalkie_big_nohaplotig	exon	10727709	10727872	100	-	.	Parent=FBgn0031537.1.mrna1;Target=FBgn0031537.1 1277 1440 +
ChrX	stalkie_big_nohaplotig	exon	10727938	10728085	100	-	.	Parent=FBgn0031537.1.mrna1;Target=FBgn0031537.1 1129 1276 +
ChrX	stalkie_big_nohaplotig	exon	10728155	10728289	100	-	.	Parent=FBgn0031537.1.mrna1;Target=FBgn0031537.1 994 1128 +
ChrX	stalkie_big_nohaplotig	exon	10728413	10728627	99	-	.	Parent=FBgn0031537.1.mrna1;Target=FBgn0031537.1 779 993 +
ChrX	stalkie_big_nohaplotig	exon	10728692	10729309	99	-	.	Parent=FBgn0031537.1.mrna1;Target=FBgn0031537.1 161 778 +
ChrX	stalkie_big_nohaplotig	exon	10729369	10729528	100	-	.	Parent=FBgn0031537.1.mrna1;Target=FBgn0031537.1 1 160 +
ChrX	stalkie_big_nohaplotig	CDS	10726144	10726279	.	-	1	Parent=FBgn0031537.1.mrna1;Target=FBgn0031537.1 2595 2730 +
ChrX	stalkie_big_nohaplotig	CDS	10726346	10726762	.	-	1	Parent=FBgn0031537.1.mrna1;Target=FBgn0031537.1 2178 2594 +
ChrX	stalkie_big_nohaplotig	CDS	10726822	10727118	.	-	1	Parent=FBgn0031537.1.mrna1;Target=FBgn0031537.1 1881 2177 +
ChrX	stalkie_big_nohaplotig	CDS	10727192	10727631	.	-	0	Parent=FBgn0031537.1.mrna1;Target=FBgn0031537.1 1441 1880 +
ChrX	stalkie_big_nohaplotig	CDS	10727709	10727872	.	-	2	Parent=FBgn0031537.1.mrna1;Target=FBgn0031537.1 1277 1440 +
ChrX	stalkie_big_nohaplotig	CDS	10727938	10728085	.	-	0	Parent=FBgn0031537.1.mrna1;Target=FBgn0031537.1 1129 1276 +
ChrX	stalkie_big_nohaplotig	CDS	10728155	10728289	.	-	0	Parent=FBgn0031537.1.mrna1;Target=FBgn0031537.1 994 1128 +
ChrX	stalkie_big_nohaplotig	CDS	10728413	10728627	.	-	2	Parent=FBgn0031537.1.mrna1;Target=FBgn0031537.1 779 993 +
ChrX	stalkie_big_nohaplotig	CDS	10728692	10729309	.	-	2	Parent=FBgn0031537.1.mrna1;Target=FBgn0031537.1 161 778 +
ChrX	stalkie_big_nohaplotig	CDS	10729369	10729528	.	-	0	Parent=FBgn0031537.1.mrna1;Target=FBgn0031537.1 1 160 +
ChrX	gffcl	locus	10731308	10732304	.	+	.	ID=RLOC_00000588;geneIDs=comp156188_c0_seq1.path1;transcripts=comp156188_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10731308	10732304	.	+	.	ID=comp156188_c0_seq1.mrna1;geneID=comp156188_c0_seq1.path1;Name=comp156188_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=931;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000588
ChrX	stalkie_big_nohaplotig	exon	10731308	10731624	100	+	.	Parent=comp156188_c0_seq1.mrna1;Target=comp156188_c0_seq1 619 935 -
ChrX	stalkie_big_nohaplotig	exon	10731687	10732304	99	+	.	Parent=comp156188_c0_seq1.mrna1;Target=comp156188_c0_seq1 1 618 -
ChrX	stalkie_big_nohaplotig	CDS	10731622	10731624	.	+	0	Parent=comp156188_c0_seq1.mrna1;Target=comp156188_c0_seq1 619 621 .
ChrX	stalkie_big_nohaplotig	CDS	10731687	10732238	.	+	0	Parent=comp156188_c0_seq1.mrna1;Target=comp156188_c0_seq1 67 618 .
ChrX	gffcl	locus	10732619	10733402	.	-	.	ID=RLOC_00000589;geneIDs=comp147592_c0_seq1.path1;transcripts=comp147592_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10732619	10733402	.	-	.	ID=comp147592_c0_seq1.mrna1;geneID=comp147592_c0_seq1.path1;Name=comp147592_c0_seq1;Dir=sensecoverage=99.3;identity=97.4;matches=713;mismatches=5;indels=14;unknowns=0;locus=RLOC_00000589
ChrX	stalkie_big_nohaplotig	exon	10732619	10733039	98	-	.	Parent=comp147592_c0_seq1.mrna1;Target=comp147592_c0_seq1 312 735 +
ChrX	stalkie_big_nohaplotig	exon	10733106	10733402	95	-	.	Parent=comp147592_c0_seq1.mrna1;Target=comp147592_c0_seq1 4 311 +
ChrX	stalkie_big_nohaplotig	CDS	10732698	10733039	.	-	0	Parent=comp147592_c0_seq1.mrna1;Target=comp147592_c0_seq1 312 653 +
ChrX	stalkie_big_nohaplotig	CDS	10733106	10733108	.	-	0	Parent=comp147592_c0_seq1.mrna1;Target=comp147592_c0_seq1 309 311 +
ChrX	gffcl	locus	10734061	10734288	.	-	.	ID=RLOC_00000590;geneIDs=comp142309_c0_seq1.path1;transcripts=comp142309_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10734061	10734288	.	-	.	ID=comp142309_c0_seq1.mrna1;geneID=comp142309_c0_seq1.path1;Name=comp142309_c0_seq1;Dir=indeterminatecoverage=97.5;identity=96.1;matches=221;mismatches=7;indels=2;unknowns=0;Target=comp142309_c0_seq1 231 2 .;CDS_Target=comp142309_c0_seq1 125 42 .;locus=RLOC_00000590
ChrX	stalkie_big_nohaplotig	exon	10734061	10734288	96	-	.	Parent=comp142309_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10734166	10734248	.	-	0	Parent=comp142309_c0_seq1.mrna1
ChrX	gffcl	locus	10734863	10738086	.	+	.	ID=RLOC_00000591;geneIDs=FBgn0031536.1.path1;transcripts=FBgn0031536.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10734863	10738086	.	+	.	ID=FBgn0031536.1.mrna1;geneID=FBgn0031536.1.path1;Name=FBgn0031536.1;Dir=sensecoverage=100.0;identity=99.6;matches=2722;mismatches=11;indels=0;unknowns=0;locus=RLOC_00000591
ChrX	stalkie_big_nohaplotig	exon	10734863	10735036	98	+	.	Parent=FBgn0031536.1.mrna1;Target=FBgn0031536.1 1 174 +
ChrX	stalkie_big_nohaplotig	exon	10735095	10735628	98	+	.	Parent=FBgn0031536.1.mrna1;Target=FBgn0031536.1 175 708 +
ChrX	stalkie_big_nohaplotig	exon	10735688	10736181	99	+	.	Parent=FBgn0031536.1.mrna1;Target=FBgn0031536.1 709 1202 +
ChrX	stalkie_big_nohaplotig	exon	10736244	10736383	100	+	.	Parent=FBgn0031536.1.mrna1;Target=FBgn0031536.1 1203 1342 +
ChrX	stalkie_big_nohaplotig	exon	10736460	10736620	100	+	.	Parent=FBgn0031536.1.mrna1;Target=FBgn0031536.1 1343 1503 +
ChrX	stalkie_big_nohaplotig	exon	10736674	10736803	100	+	.	Parent=FBgn0031536.1.mrna1;Target=FBgn0031536.1 1504 1633 +
ChrX	stalkie_big_nohaplotig	exon	10736862	10737037	100	+	.	Parent=FBgn0031536.1.mrna1;Target=FBgn0031536.1 1634 1809 +
ChrX	stalkie_big_nohaplotig	exon	10737103	10737651	99	+	.	Parent=FBgn0031536.1.mrna1;Target=FBgn0031536.1 1810 2358 +
ChrX	stalkie_big_nohaplotig	exon	10737712	10738086	100	+	.	Parent=FBgn0031536.1.mrna1;Target=FBgn0031536.1 2359 2733 +
ChrX	stalkie_big_nohaplotig	CDS	10734863	10735036	.	+	0	Parent=FBgn0031536.1.mrna1;Target=FBgn0031536.1 1 174 +
ChrX	stalkie_big_nohaplotig	CDS	10735095	10735628	.	+	0	Parent=FBgn0031536.1.mrna1;Target=FBgn0031536.1 175 708 +
ChrX	stalkie_big_nohaplotig	CDS	10735688	10736181	.	+	0	Parent=FBgn0031536.1.mrna1;Target=FBgn0031536.1 709 1202 +
ChrX	stalkie_big_nohaplotig	CDS	10736244	10736383	.	+	1	Parent=FBgn0031536.1.mrna1;Target=FBgn0031536.1 1203 1342 +
ChrX	stalkie_big_nohaplotig	CDS	10736460	10736620	.	+	2	Parent=FBgn0031536.1.mrna1;Target=FBgn0031536.1 1343 1503 +
ChrX	stalkie_big_nohaplotig	CDS	10736674	10736803	.	+	0	Parent=FBgn0031536.1.mrna1;Target=FBgn0031536.1 1504 1633 +
ChrX	stalkie_big_nohaplotig	CDS	10736862	10737037	.	+	2	Parent=FBgn0031536.1.mrna1;Target=FBgn0031536.1 1634 1809 +
ChrX	stalkie_big_nohaplotig	CDS	10737103	10737651	.	+	0	Parent=FBgn0031536.1.mrna1;Target=FBgn0031536.1 1810 2358 +
ChrX	stalkie_big_nohaplotig	CDS	10737712	10738086	.	+	0	Parent=FBgn0031536.1.mrna1;Target=FBgn0031536.1 2359 2733 +
ChrX	gffcl	locus	10740678	10741662	.	-	.	ID=RLOC_00000592;geneIDs=FBgn0031535.1.path1;transcripts=FBgn0031535.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10740678	10741662	.	-	.	ID=FBgn0031535.1.mrna1;geneID=FBgn0031535.1.path1;Name=FBgn0031535.1;Dir=sensecoverage=100.0;identity=100.0;matches=777;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000592
ChrX	stalkie_big_nohaplotig	exon	10740678	10740845	100	-	.	Parent=FBgn0031535.1.mrna1;Target=FBgn0031535.1 610 777 +
ChrX	stalkie_big_nohaplotig	exon	10740924	10741056	100	-	.	Parent=FBgn0031535.1.mrna1;Target=FBgn0031535.1 477 609 +
ChrX	stalkie_big_nohaplotig	exon	10741120	10741522	100	-	.	Parent=FBgn0031535.1.mrna1;Target=FBgn0031535.1 74 476 +
ChrX	stalkie_big_nohaplotig	exon	10741590	10741662	100	-	.	Parent=FBgn0031535.1.mrna1;Target=FBgn0031535.1 1 73 +
ChrX	stalkie_big_nohaplotig	CDS	10740678	10740845	.	-	0	Parent=FBgn0031535.1.mrna1;Target=FBgn0031535.1 610 777 +
ChrX	stalkie_big_nohaplotig	CDS	10740924	10741056	.	-	1	Parent=FBgn0031535.1.mrna1;Target=FBgn0031535.1 477 609 +
ChrX	stalkie_big_nohaplotig	CDS	10741120	10741522	.	-	2	Parent=FBgn0031535.1.mrna1;Target=FBgn0031535.1 74 476 +
ChrX	stalkie_big_nohaplotig	CDS	10741590	10741662	.	-	0	Parent=FBgn0031535.1.mrna1;Target=FBgn0031535.1 1 73 +
ChrX	gffcl	locus	10751960	10767652	.	+	.	ID=RLOC_00000593;geneIDs=FBgn0002121.1.path1;transcripts=FBgn0002121.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10751960	10767652	.	+	.	ID=FBgn0002121.1.mrna1;geneID=FBgn0002121.1.path1;Name=FBgn0002121.1;Dir=sensecoverage=99.9;identity=99.7;matches=3550;mismatches=9;indels=0;unknowns=0;locus=RLOC_00000593
ChrX	stalkie_big_nohaplotig	exon	10751960	10752107	99	+	.	Parent=FBgn0002121.1.mrna1;Target=FBgn0002121.1 3 150 +
ChrX	stalkie_big_nohaplotig	exon	10762973	10763751	99	+	.	Parent=FBgn0002121.1.mrna1;Target=FBgn0002121.1 151 929 +
ChrX	stalkie_big_nohaplotig	exon	10763818	10764363	99	+	.	Parent=FBgn0002121.1.mrna1;Target=FBgn0002121.1 930 1475 +
ChrX	stalkie_big_nohaplotig	exon	10764426	10764937	100	+	.	Parent=FBgn0002121.1.mrna1;Target=FBgn0002121.1 1476 1987 +
ChrX	stalkie_big_nohaplotig	exon	10765000	10765127	100	+	.	Parent=FBgn0002121.1.mrna1;Target=FBgn0002121.1 1988 2115 +
ChrX	stalkie_big_nohaplotig	exon	10765189	10765294	100	+	.	Parent=FBgn0002121.1.mrna1;Target=FBgn0002121.1 2116 2221 +
ChrX	stalkie_big_nohaplotig	exon	10765352	10766009	99	+	.	Parent=FBgn0002121.1.mrna1;Target=FBgn0002121.1 2222 2879 +
ChrX	stalkie_big_nohaplotig	exon	10766073	10766512	100	+	.	Parent=FBgn0002121.1.mrna1;Target=FBgn0002121.1 2880 3319 +
ChrX	stalkie_big_nohaplotig	exon	10767096	10767204	98	+	.	Parent=FBgn0002121.1.mrna1;Target=FBgn0002121.1 3320 3428 +
ChrX	stalkie_big_nohaplotig	exon	10767520	10767652	100	+	.	Parent=FBgn0002121.1.mrna1;Target=FBgn0002121.1 3429 3561 +
ChrX	stalkie_big_nohaplotig	CDS	10751961	10752107	.	+	0	Parent=FBgn0002121.1.mrna1;Target=FBgn0002121.1 4 150 +
ChrX	stalkie_big_nohaplotig	CDS	10762973	10763751	.	+	0	Parent=FBgn0002121.1.mrna1;Target=FBgn0002121.1 151 929 +
ChrX	stalkie_big_nohaplotig	CDS	10763818	10764363	.	+	1	Parent=FBgn0002121.1.mrna1;Target=FBgn0002121.1 930 1475 +
ChrX	stalkie_big_nohaplotig	CDS	10764426	10764937	.	+	1	Parent=FBgn0002121.1.mrna1;Target=FBgn0002121.1 1476 1987 +
ChrX	stalkie_big_nohaplotig	CDS	10765000	10765127	.	+	2	Parent=FBgn0002121.1.mrna1;Target=FBgn0002121.1 1988 2115 +
ChrX	stalkie_big_nohaplotig	CDS	10765189	10765294	.	+	0	Parent=FBgn0002121.1.mrna1;Target=FBgn0002121.1 2116 2221 +
ChrX	stalkie_big_nohaplotig	CDS	10765352	10766009	.	+	2	Parent=FBgn0002121.1.mrna1;Target=FBgn0002121.1 2222 2879 +
ChrX	stalkie_big_nohaplotig	CDS	10766073	10766512	.	+	1	Parent=FBgn0002121.1.mrna1;Target=FBgn0002121.1 2880 3319 +
ChrX	stalkie_big_nohaplotig	CDS	10767096	10767204	.	+	2	Parent=FBgn0002121.1.mrna1;Target=FBgn0002121.1 3320 3428 +
ChrX	stalkie_big_nohaplotig	CDS	10767520	10767652	.	+	1	Parent=FBgn0002121.1.mrna1;Target=FBgn0002121.1 3429 3561 +
ChrX	gffcl	locus	10768734	10768965	.	-	.	ID=RLOC_00000594;geneIDs=comp663090_c0_seq1.path1;transcripts=comp663090_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10768734	10768965	.	-	.	ID=comp663090_c0_seq1.mrna1;geneID=comp663090_c0_seq1.path1;Name=comp663090_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=231;mismatches=1;indels=0;unknowns=0;Target=comp663090_c0_seq1 232 1 .;CDS_Target=comp663090_c0_seq1 135 1 .;locus=RLOC_00000594
ChrX	stalkie_big_nohaplotig	exon	10768734	10768965	99	-	.	Parent=comp663090_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10768831	10768965	.	-	0	Parent=comp663090_c0_seq1.mrna1
ChrX	gffcl	locus	10794722	10795003	.	+	.	ID=RLOC_00000595;geneIDs=FBgn0031488.path1;transcripts=FBgn0031488.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10794722	10795003	.	+	.	ID=FBgn0031488.mrna1;geneID=FBgn0031488.path1;Name=FBgn0031488;Dir=indeterminatecoverage=100.0;identity=100.0;matches=282;mismatches=0;indels=0;unknowns=0;Target=FBgn0031488 282 1 .;locus=RLOC_00000595
ChrX	stalkie_big_nohaplotig	exon	10794722	10795003	100	+	.	Parent=FBgn0031488.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10794722	10795003	.	+	0	Parent=FBgn0031488.mrna1
ChrX	gffcl	locus	10801818	10805569	.	+	.	ID=RLOC_00000596;geneIDs=ORF32.path1;transcripts=ORF32.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10801818	10805569	.	+	.	ID=ORF32.mrna1;geneID=ORF32.path1;Name=ORF32;Dir=indeterminatecoverage=100.0;identity=99.8;matches=3745;mismatches=7;indels=0;unknowns=0;Target=ORF32 3752 1 .;CDS_Target=ORF32 3750 1 .;locus=RLOC_00000596
ChrX	stalkie_big_nohaplotig	exon	10801818	10805569	99	+	.	Parent=ORF32.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10801818	10805567	.	+	0	Parent=ORF32.mrna1
ChrX	gffcl	locus	10814066	10817862	.	+	.	ID=RLOC_00000598;geneIDs=FBgn0031492.1.path1;transcripts=FBgn0031492.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10814066	10817862	.	+	.	ID=FBgn0031492.1.mrna1;geneID=FBgn0031492.1.path1;Name=FBgn0031492.1;Dir=sensecoverage=100.0;identity=99.9;matches=2455;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000598
ChrX	stalkie_big_nohaplotig	exon	10814066	10814469	100	+	.	Parent=FBgn0031492.1.mrna1;Target=FBgn0031492.1 1 404 +
ChrX	stalkie_big_nohaplotig	exon	10814548	10814795	99	+	.	Parent=FBgn0031492.1.mrna1;Target=FBgn0031492.1 405 652 +
ChrX	stalkie_big_nohaplotig	exon	10814856	10815907	100	+	.	Parent=FBgn0031492.1.mrna1;Target=FBgn0031492.1 653 1704 +
ChrX	stalkie_big_nohaplotig	exon	10815972	10816274	99	+	.	Parent=FBgn0031492.1.mrna1;Target=FBgn0031492.1 1705 2007 +
ChrX	stalkie_big_nohaplotig	exon	10816337	10816408	100	+	.	Parent=FBgn0031492.1.mrna1;Target=FBgn0031492.1 2008 2079 +
ChrX	stalkie_big_nohaplotig	exon	10816781	10816867	100	+	.	Parent=FBgn0031492.1.mrna1;Target=FBgn0031492.1 2080 2166 +
ChrX	stalkie_big_nohaplotig	exon	10817572	10817862	100	+	.	Parent=FBgn0031492.1.mrna1;Target=FBgn0031492.1 2167 2457 +
ChrX	stalkie_big_nohaplotig	CDS	10814066	10814469	.	+	0	Parent=FBgn0031492.1.mrna1;Target=FBgn0031492.1 1 404 +
ChrX	stalkie_big_nohaplotig	CDS	10814548	10814795	.	+	1	Parent=FBgn0031492.1.mrna1;Target=FBgn0031492.1 405 652 +
ChrX	stalkie_big_nohaplotig	CDS	10814856	10815907	.	+	2	Parent=FBgn0031492.1.mrna1;Target=FBgn0031492.1 653 1704 +
ChrX	stalkie_big_nohaplotig	CDS	10815972	10816274	.	+	0	Parent=FBgn0031492.1.mrna1;Target=FBgn0031492.1 1705 2007 +
ChrX	stalkie_big_nohaplotig	CDS	10816337	10816408	.	+	0	Parent=FBgn0031492.1.mrna1;Target=FBgn0031492.1 2008 2079 +
ChrX	stalkie_big_nohaplotig	CDS	10816781	10816867	.	+	0	Parent=FBgn0031492.1.mrna1;Target=FBgn0031492.1 2080 2166 +
ChrX	stalkie_big_nohaplotig	CDS	10817572	10817862	.	+	0	Parent=FBgn0031492.1.mrna1;Target=FBgn0031492.1 2167 2457 +
ChrX	gffcl	locus	10818927	10821602	.	-	.	ID=RLOC_00000599;geneIDs=FBgn0031493.1.path1;transcripts=FBgn0031493.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10818927	10821602	.	-	.	ID=FBgn0031493.1.mrna1;geneID=FBgn0031493.1.path1;Name=FBgn0031493.1;Dir=sensecoverage=100.0;identity=100.0;matches=2381;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000599
ChrX	stalkie_big_nohaplotig	exon	10818927	10819293	100	-	.	Parent=FBgn0031493.1.mrna1;Target=FBgn0031493.1 2016 2382 +
ChrX	stalkie_big_nohaplotig	exon	10819353	10819597	100	-	.	Parent=FBgn0031493.1.mrna1;Target=FBgn0031493.1 1771 2015 +
ChrX	stalkie_big_nohaplotig	exon	10819660	10820424	100	-	.	Parent=FBgn0031493.1.mrna1;Target=FBgn0031493.1 1006 1770 +
ChrX	stalkie_big_nohaplotig	exon	10820485	10820683	99	-	.	Parent=FBgn0031493.1.mrna1;Target=FBgn0031493.1 807 1005 +
ChrX	stalkie_big_nohaplotig	exon	10820738	10821498	100	-	.	Parent=FBgn0031493.1.mrna1;Target=FBgn0031493.1 46 806 +
ChrX	stalkie_big_nohaplotig	exon	10821558	10821602	100	-	.	Parent=FBgn0031493.1.mrna1;Target=FBgn0031493.1 1 45 +
ChrX	stalkie_big_nohaplotig	CDS	10818927	10819293	.	-	1	Parent=FBgn0031493.1.mrna1;Target=FBgn0031493.1 2016 2382 +
ChrX	stalkie_big_nohaplotig	CDS	10819353	10819597	.	-	0	Parent=FBgn0031493.1.mrna1;Target=FBgn0031493.1 1771 2015 +
ChrX	stalkie_big_nohaplotig	CDS	10819660	10820424	.	-	0	Parent=FBgn0031493.1.mrna1;Target=FBgn0031493.1 1006 1770 +
ChrX	stalkie_big_nohaplotig	CDS	10820485	10820683	.	-	1	Parent=FBgn0031493.1.mrna1;Target=FBgn0031493.1 807 1005 +
ChrX	stalkie_big_nohaplotig	CDS	10820738	10821498	.	-	0	Parent=FBgn0031493.1.mrna1;Target=FBgn0031493.1 46 806 +
ChrX	stalkie_big_nohaplotig	CDS	10821558	10821602	.	-	0	Parent=FBgn0031493.1.mrna1;Target=FBgn0031493.1 1 45 +
ChrX	gffcl	locus	10822851	10823975	.	+	.	ID=RLOC_00000600;geneIDs=FBgn0031494.1.path1;transcripts=FBgn0031494.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10822851	10823975	.	+	.	ID=FBgn0031494.1.mrna1;geneID=FBgn0031494.1.path1;Name=FBgn0031494.1;Dir=sensecoverage=100.0;identity=98.7;matches=927;mismatches=0;indels=12;unknowns=0;locus=RLOC_00000600
ChrX	stalkie_big_nohaplotig	exon	10822851	10822953	100	+	.	Parent=FBgn0031494.1.mrna1;Target=FBgn0031494.1 1 103 +
ChrX	stalkie_big_nohaplotig	exon	10823020	10823259	95	+	.	Parent=FBgn0031494.1.mrna1;Target=FBgn0031494.1 104 355 +
ChrX	stalkie_big_nohaplotig	exon	10823337	10823503	100	+	.	Parent=FBgn0031494.1.mrna1;Target=FBgn0031494.1 356 522 +
ChrX	stalkie_big_nohaplotig	exon	10823559	10823975	100	+	.	Parent=FBgn0031494.1.mrna1;Target=FBgn0031494.1 523 939 +
ChrX	stalkie_big_nohaplotig	CDS	10822851	10822953	.	+	0	Parent=FBgn0031494.1.mrna1;Target=FBgn0031494.1 1 103 +
ChrX	stalkie_big_nohaplotig	CDS	10823020	10823259	.	+	2	Parent=FBgn0031494.1.mrna1;Target=FBgn0031494.1 104 355 +
ChrX	stalkie_big_nohaplotig	CDS	10823337	10823503	.	+	2	Parent=FBgn0031494.1.mrna1;Target=FBgn0031494.1 356 522 +
ChrX	stalkie_big_nohaplotig	CDS	10823559	10823975	.	+	0	Parent=FBgn0031494.1.mrna1;Target=FBgn0031494.1 523 939 +
ChrX	stalkie_big_nohaplotig	mRNA	10829018	10833194	.	-	.	ID=FBgn0031496.1.mrna1;geneID=FBgn0031496.1.path1;Name=FBgn0031496.1;Dir=sensecoverage=100.0;identity=99.6;matches=2878;mismatches=11;indels=0;unknowns=0;locus=RLOC_00000601
ChrX	stalkie_big_nohaplotig	exon	10829018	10829159	100	-	.	Parent=FBgn0031496.1.mrna1;Target=FBgn0031496.1 2748 2889 +
ChrX	stalkie_big_nohaplotig	exon	10829315	10829838	100	-	.	Parent=FBgn0031496.1.mrna1;Target=FBgn0031496.1 2224 2747 +
ChrX	stalkie_big_nohaplotig	exon	10830603	10830996	100	-	.	Parent=FBgn0031496.1.mrna1;Target=FBgn0031496.1 1830 2223 +
ChrX	stalkie_big_nohaplotig	exon	10831100	10832634	99	-	.	Parent=FBgn0031496.1.mrna1;Target=FBgn0031496.1 295 1829 +
ChrX	stalkie_big_nohaplotig	exon	10832901	10833194	99	-	.	Parent=FBgn0031496.1.mrna1;Target=FBgn0031496.1 1 294 +
ChrX	stalkie_big_nohaplotig	CDS	10829018	10829159	.	-	1	Parent=FBgn0031496.1.mrna1;Target=FBgn0031496.1 2748 2889 +
ChrX	stalkie_big_nohaplotig	CDS	10829315	10829838	.	-	0	Parent=FBgn0031496.1.mrna1;Target=FBgn0031496.1 2224 2747 +
ChrX	stalkie_big_nohaplotig	CDS	10830603	10830996	.	-	1	Parent=FBgn0031496.1.mrna1;Target=FBgn0031496.1 1830 2223 +
ChrX	stalkie_big_nohaplotig	CDS	10831100	10832634	.	-	0	Parent=FBgn0031496.1.mrna1;Target=FBgn0031496.1 295 1829 +
ChrX	stalkie_big_nohaplotig	CDS	10832901	10833194	.	-	0	Parent=FBgn0031496.1.mrna1;Target=FBgn0031496.1 1 294 +
ChrX	stalkie_big_nohaplotig	mRNA	10829818	10830626	.	-	.	ID=comp73675_c0_seq1.mrna1;geneID=comp73675_c0_seq1.path1;Name=comp73675_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=809;mismatches=0;indels=0;unknowns=0;Target=comp73675_c0_seq1 809 1 .;CDS_Target=comp73675_c0_seq1 670 506 .;locus=RLOC_00000601
ChrX	stalkie_big_nohaplotig	exon	10829818	10830626	100	-	.	Parent=comp73675_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10829957	10830121	.	-	0	Parent=comp73675_c0_seq1.mrna1
ChrX	gffcl	locus	10836110	10837630	.	-	.	ID=RLOC_00000602;geneIDs=FBgn0031497.1.path1;transcripts=FBgn0031497.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10836110	10837630	.	-	.	ID=FBgn0031497.1.mrna1;geneID=FBgn0031497.1.path1;Name=FBgn0031497.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1520;mismatches=1;indels=0;unknowns=0;Target=FBgn0031497.1 1521 1 .;locus=RLOC_00000602
ChrX	stalkie_big_nohaplotig	exon	10836110	10837630	99	-	.	Parent=FBgn0031497.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10836110	10837630	.	-	0	Parent=FBgn0031497.1.mrna1
ChrX	gffcl	locus	10838166	10839320	.	+	.	ID=RLOC_00000603;geneIDs=FBgn0031498.1.path1;transcripts=FBgn0031498.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10838166	10839320	.	+	.	ID=FBgn0031498.1.mrna1;geneID=FBgn0031498.1.path1;Name=FBgn0031498.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1153;mismatches=2;indels=0;unknowns=0;Target=FBgn0031498.1 1155 1 .;locus=RLOC_00000603
ChrX	stalkie_big_nohaplotig	exon	10838166	10839320	99	+	.	Parent=FBgn0031498.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10838166	10839320	.	+	0	Parent=FBgn0031498.1.mrna1
ChrX	gffcl	locus	10841360	10842005	.	-	.	ID=RLOC_00000604;geneIDs=FBgn0243513.1.path1;transcripts=FBgn0243513.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10841360	10842005	.	-	.	ID=FBgn0243513.1.mrna1;geneID=FBgn0243513.1.path1;Name=FBgn0243513.1;Dir=sensecoverage=100.0;identity=100.0;matches=489;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000604
ChrX	stalkie_big_nohaplotig	exon	10841360	10841429	100	-	.	Parent=FBgn0243513.1.mrna1;Target=FBgn0243513.1 420 489 +
ChrX	stalkie_big_nohaplotig	exon	10841487	10841809	100	-	.	Parent=FBgn0243513.1.mrna1;Target=FBgn0243513.1 97 419 +
ChrX	stalkie_big_nohaplotig	exon	10841910	10842005	100	-	.	Parent=FBgn0243513.1.mrna1;Target=FBgn0243513.1 1 96 +
ChrX	stalkie_big_nohaplotig	CDS	10841360	10841429	.	-	1	Parent=FBgn0243513.1.mrna1;Target=FBgn0243513.1 420 489 +
ChrX	stalkie_big_nohaplotig	CDS	10841487	10841809	.	-	0	Parent=FBgn0243513.1.mrna1;Target=FBgn0243513.1 97 419 +
ChrX	stalkie_big_nohaplotig	CDS	10841910	10842005	.	-	0	Parent=FBgn0243513.1.mrna1;Target=FBgn0243513.1 1 96 +
ChrX	gffcl	locus	10870461	10871319	.	-	.	ID=RLOC_00000605;geneIDs=comp112963_c0_seq1.path1;transcripts=comp112963_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10870461	10871319	.	-	.	ID=comp112963_c0_seq1.mrna1;geneID=comp112963_c0_seq1.path1;Name=comp112963_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.8;matches=857;mismatches=2;indels=0;unknowns=0;Target=comp112963_c0_seq1 859 1 .;CDS_Target=comp112963_c0_seq1 825 658 .;locus=RLOC_00000605
ChrX	stalkie_big_nohaplotig	exon	10870461	10871319	99	-	.	Parent=comp112963_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10870495	10870662	.	-	0	Parent=comp112963_c0_seq1.mrna1
ChrX	gffcl	locus	10888284	10888908	.	+	.	ID=RLOC_00000606;geneIDs=comp153832_c0_seq1.path1;transcripts=comp153832_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10888284	10888908	.	+	.	ID=comp153832_c0_seq1.mrna1;geneID=comp153832_c0_seq1.path1;Name=comp153832_c0_seq1;Dir=indeterminatecoverage=93.8;identity=99.4;matches=621;mismatches=4;indels=0;unknowns=0;Target=comp153832_c0_seq1 641 17 .;CDS_Target=comp153832_c0_seq1 407 282 .;locus=RLOC_00000606
ChrX	stalkie_big_nohaplotig	exon	10888284	10888908	99	+	.	Parent=comp153832_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10888549	10888674	.	+	0	Parent=comp153832_c0_seq1.mrna1
ChrX	gffcl	locus	10951888	10975452	.	-	.	ID=RLOC_00000607;geneIDs=FBgn0028481.1.path1,comp159167_c0_seq1.path1;transcripts=comp159167_c0_seq1.mrna1,FBgn0028481.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10951888	10975452	.	-	.	ID=comp159167_c0_seq1.mrna1;geneID=comp159167_c0_seq1.path1;Name=comp159167_c0_seq1;Dir=sensecoverage=97.2;identity=99.6;matches=5058;mismatches=9;indels=9;unknowns=0;locus=RLOC_00000607
ChrX	stalkie_big_nohaplotig	exon	10951888	10954181	99	-	.	Parent=comp159167_c0_seq1.mrna1;Target=comp159167_c0_seq1 2903 5205 +
ChrX	stalkie_big_nohaplotig	exon	10954328	10954412	100	-	.	Parent=comp159167_c0_seq1.mrna1;Target=comp159167_c0_seq1 2818 2902 +
ChrX	stalkie_big_nohaplotig	exon	10955182	10955570	99	-	.	Parent=comp159167_c0_seq1.mrna1;Target=comp159167_c0_seq1 2429 2817 +
ChrX	stalkie_big_nohaplotig	exon	10955655	10955740	100	-	.	Parent=comp159167_c0_seq1.mrna1;Target=comp159167_c0_seq1 2343 2428 +
ChrX	stalkie_big_nohaplotig	exon	10964649	10964763	100	-	.	Parent=comp159167_c0_seq1.mrna1;Target=comp159167_c0_seq1 2228 2342 +
ChrX	stalkie_big_nohaplotig	exon	10964896	10966351	100	-	.	Parent=comp159167_c0_seq1.mrna1;Target=comp159167_c0_seq1 772 2227 +
ChrX	stalkie_big_nohaplotig	exon	10966502	10967054	100	-	.	Parent=comp159167_c0_seq1.mrna1;Target=comp159167_c0_seq1 219 771 +
ChrX	stalkie_big_nohaplotig	exon	10975364	10975452	100	-	.	Parent=comp159167_c0_seq1.mrna1;Target=comp159167_c0_seq1 130 218 +
ChrX	stalkie_big_nohaplotig	CDS	10953974	10954181	.	-	2	Parent=comp159167_c0_seq1.mrna1;Target=comp159167_c0_seq1 2903 3111 +
ChrX	stalkie_big_nohaplotig	CDS	10954328	10954412	.	-	0	Parent=comp159167_c0_seq1.mrna1;Target=comp159167_c0_seq1 2818 2902 +
ChrX	stalkie_big_nohaplotig	CDS	10955182	10955570	.	-	2	Parent=comp159167_c0_seq1.mrna1;Target=comp159167_c0_seq1 2429 2817 +
ChrX	stalkie_big_nohaplotig	CDS	10955655	10955740	.	-	1	Parent=comp159167_c0_seq1.mrna1;Target=comp159167_c0_seq1 2343 2428 +
ChrX	stalkie_big_nohaplotig	CDS	10964649	10964763	.	-	2	Parent=comp159167_c0_seq1.mrna1;Target=comp159167_c0_seq1 2228 2342 +
ChrX	stalkie_big_nohaplotig	CDS	10964896	10966351	.	-	0	Parent=comp159167_c0_seq1.mrna1;Target=comp159167_c0_seq1 772 2227 +
ChrX	stalkie_big_nohaplotig	CDS	10966502	10967054	.	-	1	Parent=comp159167_c0_seq1.mrna1;Target=comp159167_c0_seq1 219 771 +
ChrX	stalkie_big_nohaplotig	CDS	10975364	10975452	.	-	0	Parent=comp159167_c0_seq1.mrna1;Target=comp159167_c0_seq1 130 218 +
ChrX	stalkie_big_nohaplotig	mRNA	10953774	10975450	.	-	.	ID=FBgn0028481.1.mrna1;geneID=FBgn0028481.1.path1;Name=FBgn0028481.1;Dir=sensecoverage=95.9;identity=99.9;matches=3096;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000607
ChrX	stalkie_big_nohaplotig	exon	10953774	10953944	99	-	.	Parent=FBgn0028481.1.mrna1;Target=FBgn0028481.1 3061 3231 +
ChrX	stalkie_big_nohaplotig	exon	10954024	10954181	100	-	.	Parent=FBgn0028481.1.mrna1;Target=FBgn0028481.1 2903 3060 +
ChrX	stalkie_big_nohaplotig	exon	10954328	10954412	100	-	.	Parent=FBgn0028481.1.mrna1;Target=FBgn0028481.1 2818 2902 +
ChrX	stalkie_big_nohaplotig	exon	10955182	10955570	99	-	.	Parent=FBgn0028481.1.mrna1;Target=FBgn0028481.1 2429 2817 +
ChrX	stalkie_big_nohaplotig	exon	10955655	10955740	100	-	.	Parent=FBgn0028481.1.mrna1;Target=FBgn0028481.1 2343 2428 +
ChrX	stalkie_big_nohaplotig	exon	10964649	10964763	100	-	.	Parent=FBgn0028481.1.mrna1;Target=FBgn0028481.1 2228 2342 +
ChrX	stalkie_big_nohaplotig	exon	10964896	10966351	100	-	.	Parent=FBgn0028481.1.mrna1;Target=FBgn0028481.1 772 2227 +
ChrX	stalkie_big_nohaplotig	exon	10966502	10967054	100	-	.	Parent=FBgn0028481.1.mrna1;Target=FBgn0028481.1 219 771 +
ChrX	stalkie_big_nohaplotig	exon	10975364	10975450	100	-	.	Parent=FBgn0028481.1.mrna1;Target=FBgn0028481.1 132 218 +
ChrX	stalkie_big_nohaplotig	CDS	10953774	10953944	.	-	0	Parent=FBgn0028481.1.mrna1;Target=FBgn0028481.1 3061 3231 +
ChrX	stalkie_big_nohaplotig	CDS	10954024	10954181	.	-	2	Parent=FBgn0028481.1.mrna1;Target=FBgn0028481.1 2903 3060 +
ChrX	stalkie_big_nohaplotig	CDS	10954328	10954412	.	-	0	Parent=FBgn0028481.1.mrna1;Target=FBgn0028481.1 2818 2902 +
ChrX	stalkie_big_nohaplotig	CDS	10955182	10955570	.	-	2	Parent=FBgn0028481.1.mrna1;Target=FBgn0028481.1 2429 2817 +
ChrX	stalkie_big_nohaplotig	CDS	10955655	10955740	.	-	1	Parent=FBgn0028481.1.mrna1;Target=FBgn0028481.1 2343 2428 +
ChrX	stalkie_big_nohaplotig	CDS	10964649	10964763	.	-	2	Parent=FBgn0028481.1.mrna1;Target=FBgn0028481.1 2228 2342 +
ChrX	stalkie_big_nohaplotig	CDS	10964896	10966351	.	-	0	Parent=FBgn0028481.1.mrna1;Target=FBgn0028481.1 772 2227 +
ChrX	stalkie_big_nohaplotig	CDS	10966502	10967054	.	-	1	Parent=FBgn0028481.1.mrna1;Target=FBgn0028481.1 219 771 +
ChrX	stalkie_big_nohaplotig	CDS	10975364	10975449	.	-	0	Parent=FBgn0028481.1.mrna1;Target=FBgn0028481.1 133 218 +
ChrX	gffcl	locus	10986106	10987793	.	+	.	ID=RLOC_00000608;geneIDs=comp147367_c0_seq1.path1;transcripts=comp147367_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	10986106	10987793	.	+	.	ID=comp147367_c0_seq1.mrna1;geneID=comp147367_c0_seq1.path1;Name=comp147367_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.5;matches=1682;mismatches=6;indels=3;unknowns=0;Target=comp147367_c0_seq1 1704 14 .;CDS_Target=comp147367_c0_seq1 1012 851 .;locus=RLOC_00000608
ChrX	stalkie_big_nohaplotig	exon	10986106	10987793	99	+	.	Parent=comp147367_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	10986940	10987101	.	+	0	Parent=comp147367_c0_seq1.mrna1
ChrX	gffcl	locus	11053853	11075066	.	-	.	ID=RLOC_00000609;geneIDs=comp160246_c0_seq1.path1;transcripts=comp160246_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11053853	11075066	.	-	.	ID=comp160246_c0_seq1.mrna1;geneID=comp160246_c0_seq1.path1;Name=comp160246_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=1725;mismatches=2;indels=3;unknowns=0;Target=comp160246_c0_seq1 1 204 .;locus=RLOC_00000609
ChrX	stalkie_big_nohaplotig	exon	11053853	11054539	99	-	.	Parent=comp160246_c0_seq1.mrna1;Target=comp160246_c0_seq1 1 690 -
ChrX	stalkie_big_nohaplotig	exon	11074027	11075066	100	-	.	Parent=comp160246_c0_seq1.mrna1;Target=comp160246_c0_seq1 691 1730 -
ChrX	stalkie_big_nohaplotig	CDS	11053853	11054053	.	-	0	Parent=comp160246_c0_seq1.mrna1
ChrX	gffcl	locus	11155068	11161141	.	+	.	ID=RLOC_00000610;geneIDs=FBgn0046113.1.path1;transcripts=FBgn0046113.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11155068	11161141	.	+	.	ID=FBgn0046113.1.mrna1;geneID=FBgn0046113.1.path1;Name=FBgn0046113.1;Dir=sensecoverage=100.0;identity=99.8;matches=2795;mismatches=6;indels=1;unknowns=0;locus=RLOC_00000610
ChrX	stalkie_big_nohaplotig	exon	11155068	11155164	100	+	.	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 1 97 +
ChrX	stalkie_big_nohaplotig	exon	11155246	11155398	100	+	.	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 98 250 +
ChrX	stalkie_big_nohaplotig	exon	11155472	11155534	100	+	.	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 251 313 +
ChrX	stalkie_big_nohaplotig	exon	11157350	11157553	99	+	.	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 314 517 +
ChrX	stalkie_big_nohaplotig	exon	11157619	11157830	99	+	.	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 518 729 +
ChrX	stalkie_big_nohaplotig	exon	11157909	11158025	99	+	.	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 730 846 +
ChrX	stalkie_big_nohaplotig	exon	11158088	11158360	99	+	.	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 847 1119 +
ChrX	stalkie_big_nohaplotig	exon	11158432	11158658	99	+	.	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 1120 1346 +
ChrX	stalkie_big_nohaplotig	exon	11159274	11159463	100	+	.	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 1347 1536 +
ChrX	stalkie_big_nohaplotig	exon	11159534	11159757	100	+	.	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 1537 1760 +
ChrX	stalkie_big_nohaplotig	exon	11159926	11160063	100	+	.	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 1761 1898 +
ChrX	stalkie_big_nohaplotig	exon	11160116	11160546	100	+	.	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 1899 2329 +
ChrX	stalkie_big_nohaplotig	exon	11160598	11160860	99	+	.	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 2330 2592 +
ChrX	stalkie_big_nohaplotig	exon	11160933	11161141	99	+	.	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 2593 2802 +
ChrX	stalkie_big_nohaplotig	CDS	11155068	11155164	.	+	0	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 1 97 +
ChrX	stalkie_big_nohaplotig	CDS	11155246	11155398	.	+	2	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 98 250 +
ChrX	stalkie_big_nohaplotig	CDS	11155472	11155534	.	+	2	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 251 313 +
ChrX	stalkie_big_nohaplotig	CDS	11157350	11157553	.	+	2	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 314 517 +
ChrX	stalkie_big_nohaplotig	CDS	11157619	11157830	.	+	2	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 518 729 +
ChrX	stalkie_big_nohaplotig	CDS	11157909	11158025	.	+	0	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 730 846 +
ChrX	stalkie_big_nohaplotig	CDS	11158088	11158360	.	+	0	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 847 1119 +
ChrX	stalkie_big_nohaplotig	CDS	11158432	11158658	.	+	0	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 1120 1346 +
ChrX	stalkie_big_nohaplotig	CDS	11159274	11159463	.	+	1	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 1347 1536 +
ChrX	stalkie_big_nohaplotig	CDS	11159534	11159757	.	+	0	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 1537 1760 +
ChrX	stalkie_big_nohaplotig	CDS	11159926	11160063	.	+	1	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 1761 1898 +
ChrX	stalkie_big_nohaplotig	CDS	11160116	11160546	.	+	1	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 1899 2329 +
ChrX	stalkie_big_nohaplotig	CDS	11160598	11160860	.	+	2	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 2330 2592 +
ChrX	stalkie_big_nohaplotig	CDS	11160933	11161141	.	+	0	Parent=FBgn0046113.1.mrna1;Target=FBgn0046113.1 2593 2802 +
ChrX	gffcl	locus	11162957	11163679	.	+	.	ID=RLOC_00000611;geneIDs=comp151931_c0_seq1.path1;transcripts=comp151931_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11162957	11163679	.	+	.	ID=comp151931_c0_seq1.mrna1;geneID=comp151931_c0_seq1.path1;Name=comp151931_c0_seq1;Dir=indeterminatecoverage=99.7;identity=97.3;matches=716;mismatches=7;indels=13;unknowns=0;Target=comp151931_c0_seq1 738 3 .;CDS_Target=comp151931_c0_seq1 405 298 .;locus=RLOC_00000611
ChrX	stalkie_big_nohaplotig	exon	11162957	11163679	97	+	.	Parent=comp151931_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	11163239	11163346	.	+	0	Parent=comp151931_c0_seq1.mrna1
ChrX	gffcl	locus	11207932	11208735	.	-	.	ID=RLOC_00000612;geneIDs=ORF2794.path1;transcripts=ORF2794.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11207932	11208735	.	-	.	ID=ORF2794.mrna1;geneID=ORF2794.path1;Name=ORF2794;Dir=indeterminatecoverage=100.0;identity=99.8;matches=802;mismatches=2;indels=0;unknowns=0;Target=ORF2794 804 1 .;locus=RLOC_00000612
ChrX	stalkie_big_nohaplotig	exon	11207932	11208735	99	-	.	Parent=ORF2794.mrna1
ChrX	stalkie_big_nohaplotig	CDS	11207932	11208735	.	-	0	Parent=ORF2794.mrna1
ChrX	gffcl	locus	11312612	11313577	.	+	.	ID=RLOC_00000613;geneIDs=comp62427_c0_seq1.path1;transcripts=comp62427_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11312612	11313577	.	+	.	ID=comp62427_c0_seq1.mrna1;geneID=comp62427_c0_seq1.path1;Name=comp62427_c0_seq1;Dir=sensecoverage=95.3;identity=100.0;matches=835;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000613
ChrX	stalkie_big_nohaplotig	exon	11312612	11312788	100	+	.	Parent=comp62427_c0_seq1.mrna1;Target=comp62427_c0_seq1 22 198 +
ChrX	stalkie_big_nohaplotig	exon	11312865	11312940	100	+	.	Parent=comp62427_c0_seq1.mrna1;Target=comp62427_c0_seq1 199 274 +
ChrX	stalkie_big_nohaplotig	exon	11312996	11313577	100	+	.	Parent=comp62427_c0_seq1.mrna1;Target=comp62427_c0_seq1 275 856 +
ChrX	stalkie_big_nohaplotig	CDS	11312754	11312788	.	+	0	Parent=comp62427_c0_seq1.mrna1;Target=comp62427_c0_seq1 164 198 +
ChrX	stalkie_big_nohaplotig	CDS	11312865	11312940	.	+	1	Parent=comp62427_c0_seq1.mrna1;Target=comp62427_c0_seq1 199 274 +
ChrX	stalkie_big_nohaplotig	CDS	11312996	11313211	.	+	0	Parent=comp62427_c0_seq1.mrna1;Target=comp62427_c0_seq1 275 490 +
ChrX	gffcl	locus	11316925	11317629	.	+	.	ID=RLOC_00000614;geneIDs=comp134654_c0_seq1.path1;transcripts=comp134654_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11316925	11317629	.	+	.	ID=comp134654_c0_seq1.mrna1;geneID=comp134654_c0_seq1.path1;Name=comp134654_c0_seq1;Dir=antisensecoverage=99.8;identity=99.0;matches=589;mismatches=2;indels=4;unknowns=0;locus=RLOC_00000614
ChrX	stalkie_big_nohaplotig	exon	11316925	11317057	100	+	.	Parent=comp134654_c0_seq1.mrna1;Target=comp134654_c0_seq1 460 592 -
ChrX	stalkie_big_nohaplotig	exon	11317113	11317233	100	+	.	Parent=comp134654_c0_seq1.mrna1;Target=comp134654_c0_seq1 339 459 -
ChrX	stalkie_big_nohaplotig	exon	11317289	11317629	98	+	.	Parent=comp134654_c0_seq1.mrna1;Target=comp134654_c0_seq1 2 338 -
ChrX	stalkie_big_nohaplotig	CDS	11317023	11317057	.	+	0	Parent=comp134654_c0_seq1.mrna1;Target=comp134654_c0_seq1 460 494 .
ChrX	stalkie_big_nohaplotig	CDS	11317113	11317233	.	+	1	Parent=comp134654_c0_seq1.mrna1;Target=comp134654_c0_seq1 339 459 .
ChrX	stalkie_big_nohaplotig	CDS	11317289	11317525	.	+	0	Parent=comp134654_c0_seq1.mrna1;Target=comp134654_c0_seq1 102 338 .
ChrX	gffcl	locus	11374228	11375756	.	+	.	ID=RLOC_00000615;geneIDs=comp153543_c0_seq1.path1;transcripts=comp153543_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11374228	11375756	.	+	.	ID=comp153543_c0_seq1.mrna1;geneID=comp153543_c0_seq1.path1;Name=comp153543_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.8;matches=285;mismatches=19;indels=0;unknowns=0;locus=RLOC_00000615
ChrX	stalkie_big_nohaplotig	exon	11374228	11374375	100	+	.	Parent=comp153543_c0_seq1.mrna1;Target=comp153543_c0_seq1 148 1 .
ChrX	stalkie_big_nohaplotig	exon	11375601	11375756	87	+	.	Parent=comp153543_c0_seq1.mrna1;Target=comp153543_c0_seq1 304 149 .
ChrX	stalkie_big_nohaplotig	CDS	11374267	11374375	.	+	0	Parent=comp153543_c0_seq1.mrna1;Target=comp153543_c0_seq1 148 40 .
ChrX	stalkie_big_nohaplotig	CDS	11375601	11375701	.	+	2	Parent=comp153543_c0_seq1.mrna1;Target=comp153543_c0_seq1 249 149 .
ChrX	gffcl	locus	11377482	11377785	.	+	.	ID=RLOC_00000616;geneIDs=comp153543_c0_seq1.path2;transcripts=comp153543_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	11377482	11377785	.	+	.	ID=comp153543_c0_seq1.mrna2;geneID=comp153543_c0_seq1.path2;Name=comp153543_c0_seq1;Dir=indeterminatecoverage=100.0;identity=87.8;matches=267;mismatches=37;indels=0;unknowns=0;Target=comp153543_c0_seq1 304 1 .;CDS_Target=comp153543_c0_seq1 33 1 .;locus=RLOC_00000616
ChrX	stalkie_big_nohaplotig	exon	11377482	11377785	87	+	.	Parent=comp153543_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	11377482	11377514	.	+	0	Parent=comp153543_c0_seq1.mrna2
ChrX	gffcl	locus	11391961	11393290	.	+	.	ID=RLOC_00000617;geneIDs=ORF1181.path1;transcripts=ORF1181.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11391961	11393290	.	+	.	ID=ORF1181.mrna1;geneID=ORF1181.path1;Name=ORF1181;Dir=sensecoverage=100.0;identity=99.9;matches=1196;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000617
ChrX	stalkie_big_nohaplotig	exon	11391961	11392274	99	+	.	Parent=ORF1181.mrna1;Target=ORF1181 1 314 +
ChrX	stalkie_big_nohaplotig	exon	11392330	11392444	100	+	.	Parent=ORF1181.mrna1;Target=ORF1181 315 429 +
ChrX	stalkie_big_nohaplotig	exon	11392523	11393290	100	+	.	Parent=ORF1181.mrna1;Target=ORF1181 430 1197 +
ChrX	stalkie_big_nohaplotig	CDS	11391961	11392274	.	+	0	Parent=ORF1181.mrna1;Target=ORF1181 1 314 +
ChrX	stalkie_big_nohaplotig	CDS	11392330	11392444	.	+	1	Parent=ORF1181.mrna1;Target=ORF1181 315 429 +
ChrX	stalkie_big_nohaplotig	CDS	11392523	11393290	.	+	0	Parent=ORF1181.mrna1;Target=ORF1181 430 1197 +
ChrX	gffcl	locus	11405935	11407355	.	+	.	ID=RLOC_00000618;geneIDs=comp162595_c0_seq1.path1;transcripts=comp162595_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11405935	11407355	.	+	.	ID=comp162595_c0_seq1.mrna1;geneID=comp162595_c0_seq1.path1;Name=comp162595_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1420;mismatches=0;indels=1;unknowns=0;Target=comp162595_c0_seq1 1420 1 .;CDS_Target=comp162595_c0_seq1 1345 1022 .;locus=RLOC_00000618
ChrX	stalkie_big_nohaplotig	exon	11405935	11407355	99	+	.	Parent=comp162595_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	11406957	11407280	.	+	0	Parent=comp162595_c0_seq1.mrna1
ChrX	gffcl	locus	11407368	11409265	.	-	.	ID=RLOC_00000619;geneIDs=comp148144_c0_seq1.path1;transcripts=comp148144_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11407368	11409265	.	-	.	ID=comp148144_c0_seq1.mrna1;geneID=comp148144_c0_seq1.path1;Name=comp148144_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=1835;mismatches=0;indels=1;unknowns=0;Target=comp148144_c0_seq1 142 438 +;locus=RLOC_00000619
ChrX	stalkie_big_nohaplotig	exon	11407368	11408697	100	-	.	Parent=comp148144_c0_seq1.mrna1;Target=comp148144_c0_seq1 507 1836 +
ChrX	stalkie_big_nohaplotig	exon	11408761	11409265	99	-	.	Parent=comp148144_c0_seq1.mrna1;Target=comp148144_c0_seq1 1 506 +
ChrX	stalkie_big_nohaplotig	CDS	11408829	11409124	.	-	0	Parent=comp148144_c0_seq1.mrna1
ChrX	gffcl	locus	11521861	11538276	.	-	.	ID=RLOC_00000620;geneIDs=comp148113_c0_seq1.path1;transcripts=comp148113_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11521861	11538276	.	-	.	ID=comp148113_c0_seq1.mrna1;geneID=comp148113_c0_seq1.path1;Name=comp148113_c0_seq1;Dir=antisensecoverage=98.0;identity=99.6;matches=1009;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000620
ChrX	stalkie_big_nohaplotig	exon	11521861	11522614	99	-	.	Parent=comp148113_c0_seq1.mrna1;Target=comp148113_c0_seq1 22 775 -
ChrX	stalkie_big_nohaplotig	exon	11538018	11538276	100	-	.	Parent=comp148113_c0_seq1.mrna1;Target=comp148113_c0_seq1 776 1034 -
ChrX	stalkie_big_nohaplotig	CDS	11522602	11522614	.	-	1	Parent=comp148113_c0_seq1.mrna1;Target=comp148113_c0_seq1 763 775 .
ChrX	stalkie_big_nohaplotig	CDS	11538018	11538274	.	-	0	Parent=comp148113_c0_seq1.mrna1;Target=comp148113_c0_seq1 776 1032 .
ChrX	gffcl	locus	11611170	11682848	.	-	.	ID=RLOC_00000621;geneIDs=comp128945_c0_seq1.path1;transcripts=comp128945_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11611170	11682848	.	-	.	ID=comp128945_c0_seq1.mrna1;geneID=comp128945_c0_seq1.path1;Name=comp128945_c0_seq1;Dir=indeterminatecoverage=86.5;identity=99.5;matches=383;mismatches=2;indels=0;unknowns=0;Target=comp128945_c0_seq1 126 1 .;locus=RLOC_00000621
ChrX	stalkie_big_nohaplotig	exon	11611170	11611177	100	-	.	Parent=comp128945_c0_seq1.mrna1;Target=comp128945_c0_seq1 385 378 .
ChrX	stalkie_big_nohaplotig	exon	11612591	11612593	100	-	.	Parent=comp128945_c0_seq1.mrna1;Target=comp128945_c0_seq1 377 375 .
ChrX	stalkie_big_nohaplotig	exon	11619027	11619034	100	-	.	Parent=comp128945_c0_seq1.mrna1;Target=comp128945_c0_seq1 374 367 .
ChrX	stalkie_big_nohaplotig	exon	11629836	11629839	100	-	.	Parent=comp128945_c0_seq1.mrna1;Target=comp128945_c0_seq1 366 363 .
ChrX	stalkie_big_nohaplotig	exon	11637347	11637350	100	-	.	Parent=comp128945_c0_seq1.mrna1;Target=comp128945_c0_seq1 362 359 .
ChrX	stalkie_big_nohaplotig	exon	11652890	11652893	100	-	.	Parent=comp128945_c0_seq1.mrna1;Target=comp128945_c0_seq1 358 355 .
ChrX	stalkie_big_nohaplotig	exon	11682495	11682848	99	-	.	Parent=comp128945_c0_seq1.mrna1;Target=comp128945_c0_seq1 354 1 .
ChrX	stalkie_big_nohaplotig	CDS	11682723	11682848	.	-	0	Parent=comp128945_c0_seq1.mrna1
ChrX	gffcl	locus	11669735	11670924	.	+	.	ID=RLOC_00000622;geneIDs=ORF1185.path1;transcripts=ORF1185.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11669735	11670924	.	+	.	ID=ORF1185.mrna1;geneID=ORF1185.path1;Name=ORF1185;Dir=indeterminatecoverage=99.7;identity=98.7;matches=1175;mismatches=15;indels=0;unknowns=0;Target=ORF1185 1194 5 .;CDS_Target=ORF1185 1194 43 .;locus=RLOC_00000622
ChrX	stalkie_big_nohaplotig	exon	11669735	11670924	98	+	.	Parent=ORF1185.mrna1
ChrX	stalkie_big_nohaplotig	CDS	11669773	11670924	.	+	0	Parent=ORF1185.mrna1
ChrX	gffcl	locus	11678207	11679931	.	+	.	ID=RLOC_00000623;geneIDs=FBgn0031250.1.path1;transcripts=FBgn0031250.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11678207	11679931	.	+	.	ID=FBgn0031250.1.mrna1;geneID=FBgn0031250.1.path1;Name=FBgn0031250.1;Dir=sensecoverage=100.0;identity=99.1;matches=1097;mismatches=9;indels=1;unknowns=0;Target=FBgn0031250.1 3 23 +;locus=RLOC_00000623
ChrX	stalkie_big_nohaplotig	exon	11678207	11678446	97	+	.	Parent=FBgn0031250.1.mrna1;Target=FBgn0031250.1 1 241 +
ChrX	stalkie_big_nohaplotig	exon	11678512	11678985	100	+	.	Parent=FBgn0031250.1.mrna1;Target=FBgn0031250.1 242 715 +
ChrX	stalkie_big_nohaplotig	exon	11679401	11679486	100	+	.	Parent=FBgn0031250.1.mrna1;Target=FBgn0031250.1 716 801 +
ChrX	stalkie_big_nohaplotig	exon	11679563	11679759	99	+	.	Parent=FBgn0031250.1.mrna1;Target=FBgn0031250.1 802 998 +
ChrX	stalkie_big_nohaplotig	exon	11679823	11679931	96	+	.	Parent=FBgn0031250.1.mrna1;Target=FBgn0031250.1 999 1107 +
ChrX	stalkie_big_nohaplotig	CDS	11678209	11678228	.	+	0	Parent=FBgn0031250.1.mrna1
ChrX	gffcl	locus	11682968	13658927	.	+	.	ID=RLOC_00000624;geneIDs=comp147136_c0_seq1.path1,comp157434_c1_seq1.path1;transcripts=comp147136_c0_seq1.mrna1,comp157434_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11682968	11765742	.	+	.	ID=comp147136_c0_seq1.mrna1;geneID=comp147136_c0_seq1.path1;Name=comp147136_c0_seq1;Dir=indeterminatecoverage=65.6;identity=98.3;matches=3159;mismatches=39;indels=17;unknowns=0;Target=comp147136_c0_seq1 2181 2017 .;locus=RLOC_00000624
ChrX	stalkie_big_nohaplotig	exon	11682968	11686028	99	+	.	Parent=comp147136_c0_seq1.mrna1;Target=comp147136_c0_seq1 3066 1 .
ChrX	stalkie_big_nohaplotig	exon	11688789	11688796	100	+	.	Parent=comp147136_c0_seq1.mrna1;Target=comp147136_c0_seq1 3074 3067 .
ChrX	stalkie_big_nohaplotig	exon	11691614	11691619	100	+	.	Parent=comp147136_c0_seq1.mrna1;Target=comp147136_c0_seq1 3080 3075 .
ChrX	stalkie_big_nohaplotig	exon	11695422	11695427	100	+	.	Parent=comp147136_c0_seq1.mrna1;Target=comp147136_c0_seq1 3086 3081 .
ChrX	stalkie_big_nohaplotig	exon	11697372	11697374	66	+	.	Parent=comp147136_c0_seq1.mrna1;Target=comp147136_c0_seq1 3089 3087 .
ChrX	stalkie_big_nohaplotig	exon	11703864	11703872	100	+	.	Parent=comp147136_c0_seq1.mrna1;Target=comp147136_c0_seq1 3098 3090 .
ChrX	stalkie_big_nohaplotig	exon	11713358	11713360	100	+	.	Parent=comp147136_c0_seq1.mrna1;Target=comp147136_c0_seq1 3165 3163 .
ChrX	stalkie_big_nohaplotig	exon	11719866	11719872	100	+	.	Parent=comp147136_c0_seq1.mrna1;Target=comp147136_c0_seq1 3172 3166 .
ChrX	stalkie_big_nohaplotig	exon	11726609	11726612	100	+	.	Parent=comp147136_c0_seq1.mrna1;Target=comp147136_c0_seq1 3176 3173 .
ChrX	stalkie_big_nohaplotig	exon	11733503	11733504	100	+	.	Parent=comp147136_c0_seq1.mrna1;Target=comp147136_c0_seq1 3178 3177 .
ChrX	stalkie_big_nohaplotig	exon	11738377	11738387	72	+	.	Parent=comp147136_c0_seq1.mrna1;Target=comp147136_c0_seq1 3189 3179 .
ChrX	stalkie_big_nohaplotig	exon	11740100	11740108	100	+	.	Parent=comp147136_c0_seq1.mrna1;Target=comp147136_c0_seq1 3198 3190 .
ChrX	stalkie_big_nohaplotig	exon	11744105	11744118	92	+	.	Parent=comp147136_c0_seq1.mrna1;Target=comp147136_c0_seq1 3212 3199 .
ChrX	stalkie_big_nohaplotig	exon	11753137	11753166	47	+	.	Parent=comp147136_c0_seq1.mrna1;Target=comp147136_c0_seq1 3250 3213 .
ChrX	stalkie_big_nohaplotig	exon	11764219	11764221	100	+	.	Parent=comp147136_c0_seq1.mrna1;Target=comp147136_c0_seq1 3253 3251 .
ChrX	stalkie_big_nohaplotig	exon	11765720	11765742	95	+	.	Parent=comp147136_c0_seq1.mrna1;Target=comp147136_c0_seq1 3276 3254 .
ChrX	stalkie_big_nohaplotig	CDS	11684984	11685147	.	+	0	Parent=comp147136_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11763968	13658927	.	+	.	ID=comp157434_c1_seq1.mrna1;geneID=comp157434_c1_seq1.path1;Name=comp157434_c1_seq1;Dir=indeterminatecoverage=90.7;identity=98.7;matches=1699;mismatches=10;indels=12;unknowns=0;locus=RLOC_00000624
ChrX	stalkie_big_nohaplotig	exon	11763968	11765560	99	+	.	Parent=comp157434_c1_seq1.mrna1;Target=comp157434_c1_seq1 1593 1 .
ChrX	stalkie_big_nohaplotig	exon	13605681	13605684	100	+	.	Parent=comp157434_c1_seq1.mrna1;Target=comp157434_c1_seq1 1597 1594 .
ChrX	stalkie_big_nohaplotig	exon	13610159	13610166	100	+	.	Parent=comp157434_c1_seq1.mrna1;Target=comp157434_c1_seq1 1605 1598 .
ChrX	stalkie_big_nohaplotig	exon	13620294	13620303	100	+	.	Parent=comp157434_c1_seq1.mrna1;Target=comp157434_c1_seq1 1615 1606 .
ChrX	stalkie_big_nohaplotig	exon	13620369	13620374	100	+	.	Parent=comp157434_c1_seq1.mrna1;Target=comp157434_c1_seq1 1621 1616 .
ChrX	stalkie_big_nohaplotig	exon	13620598	13620609	100	+	.	Parent=comp157434_c1_seq1.mrna1;Target=comp157434_c1_seq1 1633 1622 .
ChrX	stalkie_big_nohaplotig	exon	13635395	13635400	100	+	.	Parent=comp157434_c1_seq1.mrna1;Target=comp157434_c1_seq1 1639 1634 .
ChrX	stalkie_big_nohaplotig	exon	13637510	13637518	100	+	.	Parent=comp157434_c1_seq1.mrna1;Target=comp157434_c1_seq1 1648 1640 .
ChrX	stalkie_big_nohaplotig	exon	13644793	13644799	100	+	.	Parent=comp157434_c1_seq1.mrna1;Target=comp157434_c1_seq1 1714 1708 .
ChrX	stalkie_big_nohaplotig	exon	13645008	13645024	82	+	.	Parent=comp157434_c1_seq1.mrna1;Target=comp157434_c1_seq1 1731 1715 .
ChrX	stalkie_big_nohaplotig	exon	13648880	13648899	46	+	.	Parent=comp157434_c1_seq1.mrna1;Target=comp157434_c1_seq1 1763 1732 .
ChrX	stalkie_big_nohaplotig	exon	13652079	13652086	100	+	.	Parent=comp157434_c1_seq1.mrna1;Target=comp157434_c1_seq1 1771 1764 .
ChrX	stalkie_big_nohaplotig	exon	13655579	13655581	100	+	.	Parent=comp157434_c1_seq1.mrna1;Target=comp157434_c1_seq1 1781 1779 .
ChrX	stalkie_big_nohaplotig	exon	13658923	13658927	100	+	.	Parent=comp157434_c1_seq1.mrna1;Target=comp157434_c1_seq1 1786 1782 .
ChrX	stalkie_big_nohaplotig	CDS	11765526	11765560	.	+	0	Parent=comp157434_c1_seq1.mrna1;Target=comp157434_c1_seq1 1593 1559 .
ChrX	stalkie_big_nohaplotig	CDS	13605681	13605684	.	+	1	Parent=comp157434_c1_seq1.mrna1;Target=comp157434_c1_seq1 1597 1594 .
ChrX	stalkie_big_nohaplotig	CDS	13610159	13610166	.	+	0	Parent=comp157434_c1_seq1.mrna1;Target=comp157434_c1_seq1 1605 1598 .
ChrX	stalkie_big_nohaplotig	CDS	13620294	13620303	.	+	1	Parent=comp157434_c1_seq1.mrna1;Target=comp157434_c1_seq1 1615 1606 .
ChrX	stalkie_big_nohaplotig	CDS	13620369	13620374	.	+	0	Parent=comp157434_c1_seq1.mrna1;Target=comp157434_c1_seq1 1621 1616 .
ChrX	stalkie_big_nohaplotig	CDS	13620598	13620609	.	+	0	Parent=comp157434_c1_seq1.mrna1;Target=comp157434_c1_seq1 1633 1622 .
ChrX	stalkie_big_nohaplotig	CDS	13635395	13635400	.	+	0	Parent=comp157434_c1_seq1.mrna1;Target=comp157434_c1_seq1 1639 1634 .
ChrX	stalkie_big_nohaplotig	CDS	13637510	13637518	.	+	0	Parent=comp157434_c1_seq1.mrna1;Target=comp157434_c1_seq1 1648 1640 .
ChrX	gffcl	locus	11686563	11687478	.	+	.	ID=RLOC_00000625;geneIDs=comp116722_c0_seq1.path1;transcripts=comp116722_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11686563	11687478	.	+	.	ID=comp116722_c0_seq1.mrna1;geneID=comp116722_c0_seq1.path1;Name=comp116722_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.3;matches=891;mismatches=0;indels=25;unknowns=0;Target=comp116722_c0_seq1 891 1 .;CDS_Target=comp116722_c0_seq1 249 142 .;locus=RLOC_00000625
ChrX	stalkie_big_nohaplotig	exon	11686563	11687478	97	+	.	Parent=comp116722_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	11686704	11686811	.	+	0	Parent=comp116722_c0_seq1.mrna1
ChrX	gffcl	locus	11724123	11724989	.	-	.	ID=RLOC_00000627;geneIDs=FBgn0053127.1.path1;transcripts=FBgn0053127.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11724123	11724989	.	-	.	ID=FBgn0053127.1.mrna1;geneID=FBgn0053127.1.path1;Name=FBgn0053127.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=864;mismatches=3;indels=0;unknowns=0;Target=FBgn0053127.1 867 1 .;locus=RLOC_00000627
ChrX	stalkie_big_nohaplotig	exon	11724123	11724989	99	-	.	Parent=FBgn0053127.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	11724123	11724989	.	-	0	Parent=FBgn0053127.1.mrna1
ChrX	gffcl	locus	11735324	11736214	.	+	.	ID=RLOC_00000628;geneIDs=FBgn0031248.1.path1;transcripts=FBgn0031248.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11735324	11736214	.	+	.	ID=FBgn0031248.1.mrna1;geneID=FBgn0031248.1.path1;Name=FBgn0031248.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=890;mismatches=1;indels=0;unknowns=0;Target=FBgn0031248.1 891 1 .;locus=RLOC_00000628
ChrX	stalkie_big_nohaplotig	exon	11735324	11736214	99	+	.	Parent=FBgn0031248.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	11735324	11736214	.	+	0	Parent=FBgn0031248.1.mrna1
ChrX	gffcl	locus	11766070	11767030	.	-	.	ID=RLOC_00000629;geneIDs=comp59266_c0_seq1.path1;transcripts=comp59266_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11766070	11767030	.	-	.	ID=comp59266_c0_seq1.mrna1;geneID=comp59266_c0_seq1.path1;Name=comp59266_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=961;mismatches=0;indels=0;unknowns=0;Target=comp59266_c0_seq1 961 1 .;CDS_Target=comp59266_c0_seq1 214 2 .;locus=RLOC_00000629
ChrX	stalkie_big_nohaplotig	exon	11766070	11767030	100	-	.	Parent=comp59266_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	11766817	11767029	.	-	0	Parent=comp59266_c0_seq1.mrna1
ChrX	gffcl	locus	11879012	11879463	.	-	.	ID=RLOC_00000632;geneIDs=comp76281_c0_seq1.path1;transcripts=comp76281_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11879012	11879463	.	-	.	ID=comp76281_c0_seq1.mrna1;geneID=comp76281_c0_seq1.path1;Name=comp76281_c0_seq1;Dir=indeterminatecoverage=99.1;identity=100.0;matches=452;mismatches=0;indels=0;unknowns=0;Target=comp76281_c0_seq1 452 1 .;CDS_Target=comp76281_c0_seq1 450 118 .;locus=RLOC_00000632
ChrX	stalkie_big_nohaplotig	exon	11879012	11879463	100	-	.	Parent=comp76281_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	11879014	11879346	.	-	0	Parent=comp76281_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11902183	11911710	.	+	.	ID=comp146801_c0_seq1.mrna1;geneID=comp146801_c0_seq1.path1;Name=comp146801_c0_seq1;Dir=antisensecoverage=100.0;identity=94.4;matches=1022;mismatches=8;indels=53;unknowns=0;Target=comp146801_c0_seq1 827 958 .;locus=RLOC_00000633
ChrX	stalkie_big_nohaplotig	exon	11902183	11902969	93	+	.	Parent=comp146801_c0_seq1.mrna1;Target=comp146801_c0_seq1 297 1030 -
ChrX	stalkie_big_nohaplotig	exon	11906898	11906905	75	+	.	Parent=comp146801_c0_seq1.mrna1;Target=comp146801_c0_seq1 289 296 -
ChrX	stalkie_big_nohaplotig	exon	11907466	11907473	87	+	.	Parent=comp146801_c0_seq1.mrna1;Target=comp146801_c0_seq1 281 288 -
ChrX	stalkie_big_nohaplotig	exon	11911431	11911710	98	+	.	Parent=comp146801_c0_seq1.mrna1;Target=comp146801_c0_seq1 1 280 -
ChrX	stalkie_big_nohaplotig	CDS	11902255	11902400	.	+	0	Parent=comp146801_c0_seq1.mrna1
ChrX	gffcl	locus	11928601	11932347	.	+	.	ID=RLOC_00000634;geneIDs=comp161307_c4_seq1.path1;transcripts=comp161307_c4_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11928601	11932347	.	+	.	ID=comp161307_c4_seq1.mrna1;geneID=comp161307_c4_seq1.path1;Name=comp161307_c4_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=1559;mismatches=3;indels=2;unknowns=0;locus=RLOC_00000634
ChrX	stalkie_big_nohaplotig	exon	11928601	11928983	99	+	.	Parent=comp161307_c4_seq1.mrna1;Target=comp161307_c4_seq1 1 383 +
ChrX	stalkie_big_nohaplotig	exon	11929041	11929148	100	+	.	Parent=comp161307_c4_seq1.mrna1;Target=comp161307_c4_seq1 384 491 +
ChrX	stalkie_big_nohaplotig	exon	11931014	11931056	100	+	.	Parent=comp161307_c4_seq1.mrna1;Target=comp161307_c4_seq1 492 534 +
ChrX	stalkie_big_nohaplotig	exon	11931123	11931251	99	+	.	Parent=comp161307_c4_seq1.mrna1;Target=comp161307_c4_seq1 535 664 +
ChrX	stalkie_big_nohaplotig	exon	11931330	11931520	99	+	.	Parent=comp161307_c4_seq1.mrna1;Target=comp161307_c4_seq1 665 856 +
ChrX	stalkie_big_nohaplotig	exon	11931640	11932347	99	+	.	Parent=comp161307_c4_seq1.mrna1;Target=comp161307_c4_seq1 857 1564 +
ChrX	stalkie_big_nohaplotig	CDS	11928910	11928983	.	+	0	Parent=comp161307_c4_seq1.mrna1;Target=comp161307_c4_seq1 310 383 +
ChrX	stalkie_big_nohaplotig	CDS	11929041	11929148	.	+	1	Parent=comp161307_c4_seq1.mrna1;Target=comp161307_c4_seq1 384 491 +
ChrX	stalkie_big_nohaplotig	CDS	11931014	11931056	.	+	1	Parent=comp161307_c4_seq1.mrna1;Target=comp161307_c4_seq1 492 534 +
ChrX	stalkie_big_nohaplotig	CDS	11931123	11931250	.	+	0	Parent=comp161307_c4_seq1.mrna1;Target=comp161307_c4_seq1 535 663 +
ChrX	gffcl	locus	11932349	11935861	.	-	.	ID=RLOC_00000635;geneIDs=comp155725_c0_seq1.path1;transcripts=comp155725_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11932349	11935861	.	-	.	ID=comp155725_c0_seq1.mrna1;geneID=comp155725_c0_seq1.path1;Name=comp155725_c0_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=3411;mismatches=12;indels=13;unknowns=0;Target=comp155725_c0_seq1 3027 3188 .;locus=RLOC_00000635
ChrX	stalkie_big_nohaplotig	exon	11932349	11935585	99	-	.	Parent=comp155725_c0_seq1.mrna1;Target=comp155725_c0_seq1 1 3238 -
ChrX	stalkie_big_nohaplotig	exon	11935670	11935861	99	-	.	Parent=comp155725_c0_seq1.mrna1;Target=comp155725_c0_seq1 3239 3430 -
ChrX	stalkie_big_nohaplotig	CDS	11935374	11935535	.	-	0	Parent=comp155725_c0_seq1.mrna1
ChrX	gffcl	locus	11936490	11937637	.	-	.	ID=RLOC_00000636;geneIDs=comp130698_c0_seq1.path1,comp152218_c0_seq1.path1;transcripts=comp152218_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11936523	11937637	.	-	.	ID=comp152218_c0_seq1.mrna1;geneID=comp152218_c0_seq1.path1;Name=comp152218_c0_seq1;Dir=indeterminatecoverage=98.6;identity=98.2;matches=1104;mismatches=11;indels=9;unknowns=0;Target=comp152218_c0_seq1 1140 17 .;CDS_Target=comp152218_c0_seq1 175 17 .;locus=RLOC_00000636
ChrX	stalkie_big_nohaplotig	exon	11936523	11937637	98	-	.	Parent=comp152218_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	11937479	11937637	.	-	0	Parent=comp152218_c0_seq1.mrna1
ChrX	gffcl	locus	11953467	11954438	.	-	.	ID=RLOC_00000637;geneIDs=comp149734_c0_seq1.path1;transcripts=comp149734_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11953467	11954438	.	-	.	ID=comp149734_c0_seq1.mrna1;geneID=comp149734_c0_seq1.path1;Name=comp149734_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.8;matches=960;mismatches=10;indels=2;unknowns=0;Target=comp149734_c0_seq1 971 2 .;CDS_Target=comp149734_c0_seq1 773 597 .;locus=RLOC_00000637
ChrX	stalkie_big_nohaplotig	exon	11953467	11954438	98	-	.	Parent=comp149734_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	11953665	11953841	.	-	0	Parent=comp149734_c0_seq1.mrna1
ChrX	gffcl	locus	11955594	11956820	.	-	.	ID=RLOC_00000638;geneIDs=comp152593_c0_seq1.path1;transcripts=comp152593_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11955594	11956820	.	-	.	ID=comp152593_c0_seq1.mrna1;geneID=comp152593_c0_seq1.path1;Name=comp152593_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.2;matches=1221;mismatches=6;indels=4;unknowns=0;Target=comp152593_c0_seq1 1231 1 .;CDS_Target=comp152593_c0_seq1 137 3 .;locus=RLOC_00000638
ChrX	stalkie_big_nohaplotig	exon	11955594	11956820	99	-	.	Parent=comp152593_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	11956684	11956818	.	-	0	Parent=comp152593_c0_seq1.mrna1
ChrX	gffcl	locus	11957064	11957396	.	+	.	ID=RLOC_00000639;geneIDs=FBgn0000409.1.path1;transcripts=FBgn0000409.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11957064	11957396	.	+	.	ID=FBgn0000409.1.mrna1;geneID=FBgn0000409.1.path1;Name=FBgn0000409.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=333;mismatches=0;indels=0;unknowns=0;Target=FBgn0000409.1 333 1 .;locus=RLOC_00000639
ChrX	stalkie_big_nohaplotig	exon	11957064	11957396	100	+	.	Parent=FBgn0000409.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	11957064	11957396	.	+	0	Parent=FBgn0000409.1.mrna1
ChrX	gffcl	locus	11962094	11968607	.	-	.	ID=RLOC_00000640;geneIDs=FBgn0027779.1.path1;transcripts=FBgn0027779.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11962094	11968607	.	-	.	ID=FBgn0027779.1.mrna1;geneID=FBgn0027779.1.path1;Name=FBgn0027779.1;Dir=sensecoverage=100.0;identity=99.7;matches=1433;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000640
ChrX	stalkie_big_nohaplotig	exon	11962094	11962172	100	-	.	Parent=FBgn0027779.1.mrna1;Target=FBgn0027779.1 1359 1437 +
ChrX	stalkie_big_nohaplotig	exon	11962414	11962527	99	-	.	Parent=FBgn0027779.1.mrna1;Target=FBgn0027779.1 1245 1358 +
ChrX	stalkie_big_nohaplotig	exon	11962598	11963034	99	-	.	Parent=FBgn0027779.1.mrna1;Target=FBgn0027779.1 808 1244 +
ChrX	stalkie_big_nohaplotig	exon	11963135	11963260	100	-	.	Parent=FBgn0027779.1.mrna1;Target=FBgn0027779.1 682 807 +
ChrX	stalkie_big_nohaplotig	exon	11963317	11963451	100	-	.	Parent=FBgn0027779.1.mrna1;Target=FBgn0027779.1 547 681 +
ChrX	stalkie_big_nohaplotig	exon	11967959	11968437	99	-	.	Parent=FBgn0027779.1.mrna1;Target=FBgn0027779.1 68 546 +
ChrX	stalkie_big_nohaplotig	exon	11968541	11968607	98	-	.	Parent=FBgn0027779.1.mrna1;Target=FBgn0027779.1 1 67 +
ChrX	stalkie_big_nohaplotig	CDS	11962094	11962172	.	-	1	Parent=FBgn0027779.1.mrna1;Target=FBgn0027779.1 1359 1437 +
ChrX	stalkie_big_nohaplotig	CDS	11962414	11962527	.	-	1	Parent=FBgn0027779.1.mrna1;Target=FBgn0027779.1 1245 1358 +
ChrX	stalkie_big_nohaplotig	CDS	11962598	11963034	.	-	0	Parent=FBgn0027779.1.mrna1;Target=FBgn0027779.1 808 1244 +
ChrX	stalkie_big_nohaplotig	CDS	11963135	11963260	.	-	0	Parent=FBgn0027779.1.mrna1;Target=FBgn0027779.1 682 807 +
ChrX	stalkie_big_nohaplotig	CDS	11963317	11963451	.	-	0	Parent=FBgn0027779.1.mrna1;Target=FBgn0027779.1 547 681 +
ChrX	stalkie_big_nohaplotig	CDS	11967959	11968437	.	-	2	Parent=FBgn0027779.1.mrna1;Target=FBgn0027779.1 68 546 +
ChrX	stalkie_big_nohaplotig	CDS	11968541	11968607	.	-	0	Parent=FBgn0027779.1.mrna1;Target=FBgn0027779.1 1 67 +
ChrX	gffcl	locus	11964424	11967799	.	-	.	ID=RLOC_00000641;geneIDs=comp161882_c0_seq1.path1;transcripts=comp161882_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11964424	11967799	.	-	.	ID=comp161882_c0_seq1.mrna1;geneID=comp161882_c0_seq1.path1;Name=comp161882_c0_seq1;Dir=indeterminatecoverage=98.9;identity=98.5;matches=3342;mismatches=34;indels=18;unknowns=0;Target=comp161882_c0_seq1 3431 38 .;CDS_Target=comp161882_c0_seq1 2203 1976 .;locus=RLOC_00000641
ChrX	stalkie_big_nohaplotig	exon	11964424	11967799	98	-	.	Parent=comp161882_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	11965652	11965879	.	-	0	Parent=comp161882_c0_seq1.mrna1
ChrX	gffcl	locus	11970035	11970461	.	+	.	ID=RLOC_00000643;geneIDs=comp137008_c0_seq1.path1;transcripts=comp137008_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11970035	11970461	.	+	.	ID=comp137008_c0_seq1.mrna1;geneID=comp137008_c0_seq1.path1;Name=comp137008_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=420;mismatches=7;indels=0;unknowns=0;Target=comp137008_c0_seq1 427 1 .;CDS_Target=comp137008_c0_seq1 253 122 .;locus=RLOC_00000643
ChrX	stalkie_big_nohaplotig	exon	11970035	11970461	98	+	.	Parent=comp137008_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	11970156	11970287	.	+	0	Parent=comp137008_c0_seq1.mrna1
ChrX	gffcl	locus	11973664	11974101	.	-	.	ID=RLOC_00000644;geneIDs=FBgn0032595.1.path1;transcripts=FBgn0032595.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11973664	11974101	.	-	.	ID=FBgn0032595.1.mrna1;geneID=FBgn0032595.1.path1;Name=FBgn0032595.1;Dir=sensecoverage=100.0;identity=99.7;matches=368;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000644
ChrX	stalkie_big_nohaplotig	exon	11973664	11973965	99	-	.	Parent=FBgn0032595.1.mrna1;Target=FBgn0032595.1 68 369 +
ChrX	stalkie_big_nohaplotig	exon	11974035	11974101	100	-	.	Parent=FBgn0032595.1.mrna1;Target=FBgn0032595.1 1 67 +
ChrX	stalkie_big_nohaplotig	CDS	11973664	11973965	.	-	2	Parent=FBgn0032595.1.mrna1;Target=FBgn0032595.1 68 369 +
ChrX	stalkie_big_nohaplotig	CDS	11974035	11974101	.	-	0	Parent=FBgn0032595.1.mrna1;Target=FBgn0032595.1 1 67 +
ChrX	gffcl	locus	11980521	12000093	.	+	.	ID=RLOC_00000645;geneIDs=FBgn0005660.1.path1;transcripts=FBgn0005660.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	11980521	12000093	.	+	.	ID=FBgn0005660.1.mrna1;geneID=FBgn0005660.1.path1;Name=FBgn0005660.1;Dir=sensecoverage=100.0;identity=99.7;matches=1151;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000645
ChrX	stalkie_big_nohaplotig	exon	11980521	11980917	99	+	.	Parent=FBgn0005660.1.mrna1;Target=FBgn0005660.1 1 397 +
ChrX	stalkie_big_nohaplotig	exon	11996377	11996614	99	+	.	Parent=FBgn0005660.1.mrna1;Target=FBgn0005660.1 398 635 +
ChrX	stalkie_big_nohaplotig	exon	11999574	12000093	99	+	.	Parent=FBgn0005660.1.mrna1;Target=FBgn0005660.1 636 1155 +
ChrX	stalkie_big_nohaplotig	CDS	11980521	11980917	.	+	0	Parent=FBgn0005660.1.mrna1;Target=FBgn0005660.1 1 397 +
ChrX	stalkie_big_nohaplotig	CDS	11996377	11996614	.	+	2	Parent=FBgn0005660.1.mrna1;Target=FBgn0005660.1 398 635 +
ChrX	stalkie_big_nohaplotig	CDS	11999574	12000093	.	+	1	Parent=FBgn0005660.1.mrna1;Target=FBgn0005660.1 636 1155 +
ChrX	gffcl	locus	12003890	12004818	.	+	.	ID=RLOC_00000646;geneIDs=FBgn0259717.1.path1;transcripts=FBgn0259717.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12003890	12004818	.	+	.	ID=FBgn0259717.1.mrna1;geneID=FBgn0259717.1.path1;Name=FBgn0259717.1;Dir=sensecoverage=100.0;identity=100.0;matches=312;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000646
ChrX	stalkie_big_nohaplotig	exon	12003890	12004049	100	+	.	Parent=FBgn0259717.1.mrna1;Target=FBgn0259717.1 1 160 +
ChrX	stalkie_big_nohaplotig	exon	12004667	12004818	100	+	.	Parent=FBgn0259717.1.mrna1;Target=FBgn0259717.1 161 312 +
ChrX	stalkie_big_nohaplotig	CDS	12003890	12004049	.	+	0	Parent=FBgn0259717.1.mrna1;Target=FBgn0259717.1 1 160 +
ChrX	stalkie_big_nohaplotig	CDS	12004667	12004818	.	+	2	Parent=FBgn0259717.1.mrna1;Target=FBgn0259717.1 161 312 +
ChrX	gffcl	locus	12005238	12006338	.	+	.	ID=RLOC_00000647;geneIDs=FBgn0051961.1.path1;transcripts=FBgn0051961.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12005238	12006338	.	+	.	ID=FBgn0051961.1.mrna1;geneID=FBgn0051961.1.path1;Name=FBgn0051961.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1099;mismatches=2;indels=0;unknowns=0;Target=FBgn0051961.1 1101 1 .;locus=RLOC_00000647
ChrX	stalkie_big_nohaplotig	exon	12005238	12006338	99	+	.	Parent=FBgn0051961.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12005238	12006338	.	+	0	Parent=FBgn0051961.1.mrna1
ChrX	gffcl	locus	12009627	12013051	.	-	.	ID=RLOC_00000648;geneIDs=FBgn0030053.1.path1;transcripts=FBgn0030053.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12009627	12013051	.	-	.	ID=FBgn0030053.1.mrna1;geneID=FBgn0030053.1.path1;Name=FBgn0030053.1;Dir=sensecoverage=98.6;identity=99.9;matches=1162;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000648
ChrX	stalkie_big_nohaplotig	exon	12009627	12009696	100	-	.	Parent=FBgn0030053.1.mrna1;Target=FBgn0030053.1 1110 1179 +
ChrX	stalkie_big_nohaplotig	exon	12009760	12009906	100	-	.	Parent=FBgn0030053.1.mrna1;Target=FBgn0030053.1 963 1109 +
ChrX	stalkie_big_nohaplotig	exon	12011992	12012187	100	-	.	Parent=FBgn0030053.1.mrna1;Target=FBgn0030053.1 767 962 +
ChrX	stalkie_big_nohaplotig	exon	12012247	12012746	99	-	.	Parent=FBgn0030053.1.mrna1;Target=FBgn0030053.1 267 766 +
ChrX	stalkie_big_nohaplotig	exon	12012802	12013051	100	-	.	Parent=FBgn0030053.1.mrna1;Target=FBgn0030053.1 17 266 +
ChrX	stalkie_big_nohaplotig	CDS	12009627	12009696	.	-	1	Parent=FBgn0030053.1.mrna1;Target=FBgn0030053.1 1110 1179 +
ChrX	stalkie_big_nohaplotig	CDS	12009760	12009906	.	-	1	Parent=FBgn0030053.1.mrna1;Target=FBgn0030053.1 963 1109 +
ChrX	stalkie_big_nohaplotig	CDS	12011992	12012187	.	-	2	Parent=FBgn0030053.1.mrna1;Target=FBgn0030053.1 767 962 +
ChrX	stalkie_big_nohaplotig	CDS	12012247	12012746	.	-	1	Parent=FBgn0030053.1.mrna1;Target=FBgn0030053.1 267 766 +
ChrX	stalkie_big_nohaplotig	CDS	12012802	12013049	.	-	0	Parent=FBgn0030053.1.mrna1;Target=FBgn0030053.1 19 266 +
ChrX	gffcl	locus	12015628	12016952	.	+	.	ID=RLOC_00000649;geneIDs=FBgn0051111.1.path1;transcripts=FBgn0051111.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12015628	12016952	.	+	.	ID=FBgn0051111.1.mrna1;geneID=FBgn0051111.1.path1;Name=FBgn0051111.1;Dir=sensecoverage=100.0;identity=99.6;matches=1064;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000649
ChrX	stalkie_big_nohaplotig	exon	12015628	12015741	100	+	.	Parent=FBgn0051111.1.mrna1;Target=FBgn0051111.1 1 114 +
ChrX	stalkie_big_nohaplotig	exon	12015999	12016952	99	+	.	Parent=FBgn0051111.1.mrna1;Target=FBgn0051111.1 115 1068 +
ChrX	stalkie_big_nohaplotig	CDS	12015628	12015741	.	+	0	Parent=FBgn0051111.1.mrna1;Target=FBgn0051111.1 1 114 +
ChrX	stalkie_big_nohaplotig	CDS	12015999	12016952	.	+	0	Parent=FBgn0051111.1.mrna1;Target=FBgn0051111.1 115 1068 +
ChrX	gffcl	locus	12019259	12020649	.	-	.	ID=RLOC_00000650;geneIDs=FBgn0031635.1.path1;transcripts=FBgn0031635.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12019259	12020649	.	-	.	ID=FBgn0031635.1.mrna1;geneID=FBgn0031635.1.path1;Name=FBgn0031635.1;Dir=sensecoverage=100.0;identity=100.0;matches=1119;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000650
ChrX	stalkie_big_nohaplotig	exon	12019259	12019370	100	-	.	Parent=FBgn0031635.1.mrna1;Target=FBgn0031635.1 1008 1119 +
ChrX	stalkie_big_nohaplotig	exon	12019433	12019507	100	-	.	Parent=FBgn0031635.1.mrna1;Target=FBgn0031635.1 933 1007 +
ChrX	stalkie_big_nohaplotig	exon	12019576	12020175	100	-	.	Parent=FBgn0031635.1.mrna1;Target=FBgn0031635.1 333 932 +
ChrX	stalkie_big_nohaplotig	exon	12020250	12020554	100	-	.	Parent=FBgn0031635.1.mrna1;Target=FBgn0031635.1 28 332 +
ChrX	stalkie_big_nohaplotig	exon	12020623	12020649	100	-	.	Parent=FBgn0031635.1.mrna1;Target=FBgn0031635.1 1 27 +
ChrX	stalkie_big_nohaplotig	CDS	12019259	12019370	.	-	1	Parent=FBgn0031635.1.mrna1;Target=FBgn0031635.1 1008 1119 +
ChrX	stalkie_big_nohaplotig	CDS	12019433	12019507	.	-	1	Parent=FBgn0031635.1.mrna1;Target=FBgn0031635.1 933 1007 +
ChrX	stalkie_big_nohaplotig	CDS	12019576	12020175	.	-	1	Parent=FBgn0031635.1.mrna1;Target=FBgn0031635.1 333 932 +
ChrX	stalkie_big_nohaplotig	CDS	12020250	12020554	.	-	0	Parent=FBgn0031635.1.mrna1;Target=FBgn0031635.1 28 332 +
ChrX	stalkie_big_nohaplotig	CDS	12020623	12020649	.	-	0	Parent=FBgn0031635.1.mrna1;Target=FBgn0031635.1 1 27 +
ChrX	gffcl	locus	12027187	12028063	.	+	.	ID=RLOC_00000651;geneIDs=comp543094_c0_seq1.path1;transcripts=comp543094_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12027187	12028063	.	+	.	ID=comp543094_c0_seq1.mrna1;geneID=comp543094_c0_seq1.path1;Name=comp543094_c0_seq1;Dir=antisensecoverage=99.8;identity=99.8;matches=577;mismatches=1;indels=0;unknowns=0;Target=comp543094_c0_seq1 193 261 .;locus=RLOC_00000651
ChrX	stalkie_big_nohaplotig	exon	12027187	12027741	99	+	.	Parent=comp543094_c0_seq1.mrna1;Target=comp543094_c0_seq1 24 578 -
ChrX	stalkie_big_nohaplotig	exon	12028041	12028063	100	+	.	Parent=comp543094_c0_seq1.mrna1;Target=comp543094_c0_seq1 1 23 -
ChrX	stalkie_big_nohaplotig	CDS	12027504	12027572	.	+	0	Parent=comp543094_c0_seq1.mrna1
ChrX	gffcl	locus	12028527	12032545	.	+	.	ID=RLOC_00000652;geneIDs=FBgn0035763.1.path1;transcripts=FBgn0035763.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12028527	12032545	.	+	.	ID=FBgn0035763.1.mrna1;geneID=FBgn0035763.1.path1;Name=FBgn0035763.1;Dir=sensecoverage=100.0;identity=99.9;matches=1450;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000652
ChrX	stalkie_big_nohaplotig	exon	12028527	12028734	100	+	.	Parent=FBgn0035763.1.mrna1;Target=FBgn0035763.1 1 208 +
ChrX	stalkie_big_nohaplotig	exon	12030330	12030857	100	+	.	Parent=FBgn0035763.1.mrna1;Target=FBgn0035763.1 209 736 +
ChrX	stalkie_big_nohaplotig	exon	12030916	12031081	100	+	.	Parent=FBgn0035763.1.mrna1;Target=FBgn0035763.1 737 902 +
ChrX	stalkie_big_nohaplotig	exon	12031151	12031462	100	+	.	Parent=FBgn0035763.1.mrna1;Target=FBgn0035763.1 903 1214 +
ChrX	stalkie_big_nohaplotig	exon	12031524	12031642	98	+	.	Parent=FBgn0035763.1.mrna1;Target=FBgn0035763.1 1215 1333 +
ChrX	stalkie_big_nohaplotig	exon	12032427	12032545	100	+	.	Parent=FBgn0035763.1.mrna1;Target=FBgn0035763.1 1334 1452 +
ChrX	stalkie_big_nohaplotig	CDS	12028527	12028734	.	+	0	Parent=FBgn0035763.1.mrna1;Target=FBgn0035763.1 1 208 +
ChrX	stalkie_big_nohaplotig	CDS	12030330	12030857	.	+	2	Parent=FBgn0035763.1.mrna1;Target=FBgn0035763.1 209 736 +
ChrX	stalkie_big_nohaplotig	CDS	12030916	12031081	.	+	2	Parent=FBgn0035763.1.mrna1;Target=FBgn0035763.1 737 902 +
ChrX	stalkie_big_nohaplotig	CDS	12031151	12031462	.	+	1	Parent=FBgn0035763.1.mrna1;Target=FBgn0035763.1 903 1214 +
ChrX	stalkie_big_nohaplotig	CDS	12031524	12031642	.	+	1	Parent=FBgn0035763.1.mrna1;Target=FBgn0035763.1 1215 1333 +
ChrX	stalkie_big_nohaplotig	CDS	12032427	12032545	.	+	2	Parent=FBgn0035763.1.mrna1;Target=FBgn0035763.1 1334 1452 +
ChrX	gffcl	locus	12034578	12034976	.	+	.	ID=RLOC_00000653;geneIDs=comp116044_c0_seq1.path1;transcripts=comp116044_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12034578	12034976	.	+	.	ID=comp116044_c0_seq1.mrna1;geneID=comp116044_c0_seq1.path1;Name=comp116044_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.7;matches=398;mismatches=1;indels=0;unknowns=0;Target=comp116044_c0_seq1 403 5 .;CDS_Target=comp116044_c0_seq1 132 19 .;locus=RLOC_00000653
ChrX	stalkie_big_nohaplotig	exon	12034578	12034976	99	+	.	Parent=comp116044_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12034592	12034705	.	+	0	Parent=comp116044_c0_seq1.mrna1
ChrX	gffcl	locus	12035918	12036319	.	-	.	ID=RLOC_00000655;geneIDs=comp144687_c0_seq1.path1;transcripts=comp144687_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12035918	12036319	.	-	.	ID=comp144687_c0_seq1.mrna1;geneID=comp144687_c0_seq1.path1;Name=comp144687_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=398;mismatches=3;indels=1;unknowns=0;Target=comp144687_c0_seq1 401 1 .;CDS_Target=comp144687_c0_seq1 71 3 .;locus=RLOC_00000655
ChrX	stalkie_big_nohaplotig	exon	12035918	12036319	99	-	.	Parent=comp144687_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12036249	12036317	.	-	0	Parent=comp144687_c0_seq1.mrna1
ChrX	gffcl	locus	12036873	12037888	.	+	.	ID=RLOC_00000656;geneIDs=comp149513_c0_seq1.path1;transcripts=comp149513_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12036873	12037888	.	+	.	ID=comp149513_c0_seq1.mrna1;geneID=comp149513_c0_seq1.path1;Name=comp149513_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1012;mismatches=4;indels=2;unknowns=0;Target=comp149513_c0_seq1 1018 1 .;CDS_Target=comp149513_c0_seq1 681 586 .;locus=RLOC_00000656
ChrX	stalkie_big_nohaplotig	exon	12036873	12037888	99	+	.	Parent=comp149513_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12037457	12037552	.	+	0	Parent=comp149513_c0_seq1.mrna1
ChrX	gffcl	locus	12047223	12047886	.	-	.	ID=RLOC_00000657;geneIDs=comp163794_c1_seq1.path2;transcripts=comp163794_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	12047223	12047886	.	-	.	ID=comp163794_c1_seq1.mrna2;geneID=comp163794_c1_seq1.path2;Name=comp163794_c1_seq1;Dir=indeterminatecoverage=87.4;identity=99.1;matches=658;mismatches=6;indels=0;unknowns=0;Target=comp163794_c1_seq1 760 97 .;CDS_Target=comp163794_c1_seq1 332 201 .;locus=RLOC_00000657
ChrX	stalkie_big_nohaplotig	exon	12047223	12047886	99	-	.	Parent=comp163794_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	12047651	12047782	.	-	0	Parent=comp163794_c1_seq1.mrna2
ChrX	gffcl	locus	12062745	12063881	.	+	.	ID=RLOC_00000658;geneIDs=FBgn0031638.1.path1;transcripts=FBgn0031638.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12062745	12063881	.	+	.	ID=FBgn0031638.1.mrna1;geneID=FBgn0031638.1.path1;Name=FBgn0031638.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1137;mismatches=0;indels=0;unknowns=0;Target=FBgn0031638.1 1137 1 .;locus=RLOC_00000658
ChrX	stalkie_big_nohaplotig	exon	12062745	12063881	100	+	.	Parent=FBgn0031638.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12062745	12063881	.	+	0	Parent=FBgn0031638.1.mrna1
ChrX	gffcl	locus	12068198	12069066	.	-	.	ID=RLOC_00000659;geneIDs=FBgn0031639.1.path1;transcripts=FBgn0031639.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12068198	12069066	.	-	.	ID=FBgn0031639.1.mrna1;geneID=FBgn0031639.1.path1;Name=FBgn0031639.1;Dir=sensecoverage=100.0;identity=100.0;matches=801;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000659
ChrX	stalkie_big_nohaplotig	exon	12068198	12068973	100	-	.	Parent=FBgn0031639.1.mrna1;Target=FBgn0031639.1 26 801 +
ChrX	stalkie_big_nohaplotig	exon	12069042	12069066	100	-	.	Parent=FBgn0031639.1.mrna1;Target=FBgn0031639.1 1 25 +
ChrX	stalkie_big_nohaplotig	CDS	12068198	12068973	.	-	2	Parent=FBgn0031639.1.mrna1;Target=FBgn0031639.1 26 801 +
ChrX	stalkie_big_nohaplotig	CDS	12069042	12069066	.	-	0	Parent=FBgn0031639.1.mrna1;Target=FBgn0031639.1 1 25 +
ChrX	gffcl	locus	12069472	12071472	.	+	.	ID=RLOC_00000660;geneIDs=FBgn0031640.1.path1;transcripts=FBgn0031640.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12069472	12071472	.	+	.	ID=FBgn0031640.1.mrna1;geneID=FBgn0031640.1.path1;Name=FBgn0031640.1;Dir=sensecoverage=100.0;identity=100.0;matches=1656;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000660
ChrX	stalkie_big_nohaplotig	exon	12069472	12070139	100	+	.	Parent=FBgn0031640.1.mrna1;Target=FBgn0031640.1 1 668 +
ChrX	stalkie_big_nohaplotig	exon	12070194	12070342	100	+	.	Parent=FBgn0031640.1.mrna1;Target=FBgn0031640.1 669 817 +
ChrX	stalkie_big_nohaplotig	exon	12070398	12070599	100	+	.	Parent=FBgn0031640.1.mrna1;Target=FBgn0031640.1 818 1019 +
ChrX	stalkie_big_nohaplotig	exon	12070836	12071472	100	+	.	Parent=FBgn0031640.1.mrna1;Target=FBgn0031640.1 1020 1656 +
ChrX	stalkie_big_nohaplotig	CDS	12069472	12070139	.	+	0	Parent=FBgn0031640.1.mrna1;Target=FBgn0031640.1 1 668 +
ChrX	stalkie_big_nohaplotig	CDS	12070194	12070342	.	+	1	Parent=FBgn0031640.1.mrna1;Target=FBgn0031640.1 669 817 +
ChrX	stalkie_big_nohaplotig	CDS	12070398	12070599	.	+	2	Parent=FBgn0031640.1.mrna1;Target=FBgn0031640.1 818 1019 +
ChrX	stalkie_big_nohaplotig	CDS	12070836	12071472	.	+	1	Parent=FBgn0031640.1.mrna1;Target=FBgn0031640.1 1020 1656 +
ChrX	gffcl	locus	12072996	12073567	.	+	.	ID=RLOC_00000661;geneIDs=comp148076_c0_seq1.path1;transcripts=comp148076_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12072996	12073567	.	+	.	ID=comp148076_c0_seq1.mrna1;geneID=comp148076_c0_seq1.path1;Name=comp148076_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=568;mismatches=3;indels=1;unknowns=0;Target=comp148076_c0_seq1 571 1 .;CDS_Target=comp148076_c0_seq1 497 318 .;locus=RLOC_00000661
ChrX	stalkie_big_nohaplotig	exon	12072996	12073567	99	+	.	Parent=comp148076_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12073314	12073493	.	+	0	Parent=comp148076_c0_seq1.mrna1
ChrX	gffcl	locus	12076114	12078858	.	+	.	ID=RLOC_00000662;geneIDs=comp163032_c0_seq1.path3;transcripts=comp163032_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	12076114	12078858	.	+	.	ID=comp163032_c0_seq1.mrna3;geneID=comp163032_c0_seq1.path3;Name=comp163032_c0_seq1;Dir=indeterminatecoverage=79.8;identity=95.5;matches=2614;mismatches=79;indels=43;unknowns=0;Target=comp163032_c0_seq1 2124 1813 .;locus=RLOC_00000662
ChrX	stalkie_big_nohaplotig	exon	12076114	12076409	77	+	.	Parent=comp163032_c0_seq1.mrna3;Target=comp163032_c0_seq1 855 547 .
ChrX	stalkie_big_nohaplotig	exon	12076433	12078858	97	+	.	Parent=comp163032_c0_seq1.mrna3;Target=comp163032_c0_seq1 3285 888 .
ChrX	stalkie_big_nohaplotig	CDS	12077387	12077698	.	+	0	Parent=comp163032_c0_seq1.mrna3
ChrX	gffcl	locus	12081146	12097168	.	+	.	ID=RLOC_00000663;geneIDs=FBgn0051660.1.path1,comp153975_c0_seq1.path1;transcripts=comp153975_c0_seq1.mrna1,FBgn0051660.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12081146	12097168	.	+	.	ID=comp153975_c0_seq1.mrna1;geneID=comp153975_c0_seq1.path1;Name=comp153975_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=3564;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000663
ChrX	stalkie_big_nohaplotig	exon	12081146	12081774	99	+	.	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 2938 3566 -
ChrX	stalkie_big_nohaplotig	exon	12082449	12082783	100	+	.	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 2603 2937 -
ChrX	stalkie_big_nohaplotig	exon	12082913	12083158	100	+	.	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 2357 2602 -
ChrX	stalkie_big_nohaplotig	exon	12083212	12083390	100	+	.	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 2178 2356 -
ChrX	stalkie_big_nohaplotig	exon	12083457	12083537	100	+	.	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 2097 2177 -
ChrX	stalkie_big_nohaplotig	exon	12083622	12083970	100	+	.	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 1748 2096 -
ChrX	stalkie_big_nohaplotig	exon	12084051	12084119	100	+	.	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 1679 1747 -
ChrX	stalkie_big_nohaplotig	exon	12084283	12084684	100	+	.	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 1277 1678 -
ChrX	stalkie_big_nohaplotig	exon	12084743	12084937	100	+	.	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 1082 1276 -
ChrX	stalkie_big_nohaplotig	exon	12090200	12090378	100	+	.	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 903 1081 -
ChrX	stalkie_big_nohaplotig	exon	12091333	12091444	100	+	.	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 791 902 -
ChrX	stalkie_big_nohaplotig	exon	12093984	12094004	100	+	.	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 770 790 -
ChrX	stalkie_big_nohaplotig	exon	12096327	12096366	100	+	.	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 730 769 -
ChrX	stalkie_big_nohaplotig	exon	12096440	12097168	99	+	.	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 1 729 -
ChrX	stalkie_big_nohaplotig	CDS	12081243	12081774	.	+	0	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 2938 3469 .
ChrX	stalkie_big_nohaplotig	CDS	12082449	12082783	.	+	2	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 2603 2937 .
ChrX	stalkie_big_nohaplotig	CDS	12082913	12083158	.	+	0	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 2357 2602 .
ChrX	stalkie_big_nohaplotig	CDS	12083212	12083390	.	+	0	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 2178 2356 .
ChrX	stalkie_big_nohaplotig	CDS	12083457	12083537	.	+	1	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 2097 2177 .
ChrX	stalkie_big_nohaplotig	CDS	12083622	12083970	.	+	1	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 1748 2096 .
ChrX	stalkie_big_nohaplotig	CDS	12084051	12084119	.	+	0	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 1679 1747 .
ChrX	stalkie_big_nohaplotig	CDS	12084283	12084684	.	+	0	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 1277 1678 .
ChrX	stalkie_big_nohaplotig	CDS	12084743	12084937	.	+	0	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 1082 1276 .
ChrX	stalkie_big_nohaplotig	CDS	12090200	12090378	.	+	0	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 903 1081 .
ChrX	stalkie_big_nohaplotig	CDS	12091333	12091444	.	+	1	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 791 902 .
ChrX	stalkie_big_nohaplotig	CDS	12093984	12094004	.	+	0	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 770 790 .
ChrX	stalkie_big_nohaplotig	CDS	12096327	12096344	.	+	0	Parent=comp153975_c0_seq1.mrna1;Target=comp153975_c0_seq1 752 769 .
ChrX	stalkie_big_nohaplotig	mRNA	12081201	12096625	.	+	.	ID=FBgn0051660.1.mrna1;geneID=FBgn0051660.1.path1;Name=FBgn0051660.1;Dir=sensecoverage=100.0;identity=100.0;matches=2927;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000663
ChrX	stalkie_big_nohaplotig	exon	12081201	12081774	99	+	.	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 1 574 +
ChrX	stalkie_big_nohaplotig	exon	12082449	12082783	100	+	.	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 575 909 +
ChrX	stalkie_big_nohaplotig	exon	12082913	12083158	100	+	.	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 910 1155 +
ChrX	stalkie_big_nohaplotig	exon	12083212	12083390	100	+	.	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 1156 1334 +
ChrX	stalkie_big_nohaplotig	exon	12083457	12083537	100	+	.	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 1335 1415 +
ChrX	stalkie_big_nohaplotig	exon	12083622	12083970	100	+	.	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 1416 1764 +
ChrX	stalkie_big_nohaplotig	exon	12084051	12084119	100	+	.	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 1765 1833 +
ChrX	stalkie_big_nohaplotig	exon	12084283	12084684	100	+	.	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 1834 2235 +
ChrX	stalkie_big_nohaplotig	exon	12084743	12084937	100	+	.	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 2236 2430 +
ChrX	stalkie_big_nohaplotig	exon	12090200	12090378	100	+	.	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 2431 2609 +
ChrX	stalkie_big_nohaplotig	exon	12091333	12091444	100	+	.	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 2610 2721 +
ChrX	stalkie_big_nohaplotig	exon	12093984	12094004	100	+	.	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 2722 2742 +
ChrX	stalkie_big_nohaplotig	exon	12096440	12096625	100	+	.	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 2743 2928 +
ChrX	stalkie_big_nohaplotig	CDS	12081201	12081774	.	+	0	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 1 574 +
ChrX	stalkie_big_nohaplotig	CDS	12082449	12082783	.	+	2	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 575 909 +
ChrX	stalkie_big_nohaplotig	CDS	12082913	12083158	.	+	0	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 910 1155 +
ChrX	stalkie_big_nohaplotig	CDS	12083212	12083390	.	+	0	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 1156 1334 +
ChrX	stalkie_big_nohaplotig	CDS	12083457	12083537	.	+	1	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 1335 1415 +
ChrX	stalkie_big_nohaplotig	CDS	12083622	12083970	.	+	1	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 1416 1764 +
ChrX	stalkie_big_nohaplotig	CDS	12084051	12084119	.	+	0	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 1765 1833 +
ChrX	stalkie_big_nohaplotig	CDS	12084283	12084684	.	+	0	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 1834 2235 +
ChrX	stalkie_big_nohaplotig	CDS	12084743	12084937	.	+	0	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 2236 2430 +
ChrX	stalkie_big_nohaplotig	CDS	12090200	12090378	.	+	0	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 2431 2609 +
ChrX	stalkie_big_nohaplotig	CDS	12091333	12091444	.	+	1	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 2610 2721 +
ChrX	stalkie_big_nohaplotig	CDS	12093984	12094004	.	+	0	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 2722 2742 +
ChrX	stalkie_big_nohaplotig	CDS	12096440	12096625	.	+	0	Parent=FBgn0051660.1.mrna1;Target=FBgn0051660.1 2743 2928 +
ChrX	gffcl	locus	12095179	12095417	.	+	.	ID=RLOC_00000664;geneIDs=comp547310_c0_seq1.path1;transcripts=comp547310_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12095179	12095417	.	+	.	ID=comp547310_c0_seq1.mrna1;geneID=comp547310_c0_seq1.path1;Name=comp547310_c0_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=239;mismatches=0;indels=0;unknowns=0;Target=comp547310_c0_seq1 239 1 .;CDS_Target=comp547310_c0_seq1 101 3 .;locus=RLOC_00000664
ChrX	stalkie_big_nohaplotig	exon	12095179	12095417	100	+	.	Parent=comp547310_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12095181	12095279	.	+	0	Parent=comp547310_c0_seq1.mrna1
ChrX	gffcl	locus	12095793	12096125	.	+	.	ID=RLOC_00000665;geneIDs=comp718699_c0_seq1.path1;transcripts=comp718699_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12095793	12096125	.	+	.	ID=comp718699_c0_seq1.mrna1;geneID=comp718699_c0_seq1.path1;Name=comp718699_c0_seq1;Dir=indeterminatecoverage=99.1;identity=100.0;matches=333;mismatches=0;indels=0;unknowns=0;Target=comp718699_c0_seq1 333 1 .;CDS_Target=comp718699_c0_seq1 199 2 .;locus=RLOC_00000665
ChrX	stalkie_big_nohaplotig	exon	12095793	12096125	100	+	.	Parent=comp718699_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12095794	12095991	.	+	0	Parent=comp718699_c0_seq1.mrna1
ChrX	gffcl	locus	12097478	12100348	.	.	.	ID=RLOC_00000666;geneIDs=comp112394_c0_seq1.path1,comp118327_c0_seq1.path1,comp524838_c0_seq1.path1;transcripts=comp112394_c0_seq1.mrna1,comp118327_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12097478	12098851	.	+	.	ID=comp112394_c0_seq1.mrna1;geneID=comp112394_c0_seq1.path1;Name=comp112394_c0_seq1;Dir=indeterminatecoverage=98.5;identity=100.0;matches=1374;mismatches=0;indels=0;unknowns=0;Target=comp112394_c0_seq1 1395 22 .;CDS_Target=comp112394_c0_seq1 144 22 .;locus=RLOC_00000666
ChrX	stalkie_big_nohaplotig	exon	12097478	12098851	100	+	.	Parent=comp112394_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12097478	12097600	.	+	0	Parent=comp112394_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12099669	12100348	.	+	.	ID=comp118327_c0_seq1.mrna1;geneID=comp118327_c0_seq1.path1;Name=comp118327_c0_seq1;Dir=indeterminatecoverage=96.7;identity=100.0;matches=680;mismatches=0;indels=0;unknowns=0;Target=comp118327_c0_seq1 703 24 .;CDS_Target=comp118327_c0_seq1 590 483 .;locus=RLOC_00000666
ChrX	stalkie_big_nohaplotig	exon	12099669	12100348	100	+	.	Parent=comp118327_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12100128	12100235	.	+	0	Parent=comp118327_c0_seq1.mrna1
ChrX	gffcl	locus	12112744	12122810	.	+	.	ID=RLOC_00000668;geneIDs=FBgn0051935.1.path1;transcripts=FBgn0051935.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12112744	12122810	.	+	.	ID=FBgn0051935.1.mrna1;geneID=FBgn0051935.1.path1;Name=FBgn0051935.1;Dir=sensecoverage=100.0;identity=99.9;matches=2689;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000668
ChrX	stalkie_big_nohaplotig	exon	12112744	12114051	99	+	.	Parent=FBgn0051935.1.mrna1;Target=FBgn0051935.1 1 1308 +
ChrX	stalkie_big_nohaplotig	exon	12114148	12114311	100	+	.	Parent=FBgn0051935.1.mrna1;Target=FBgn0051935.1 1309 1472 +
ChrX	stalkie_big_nohaplotig	exon	12121366	12121766	100	+	.	Parent=FBgn0051935.1.mrna1;Target=FBgn0051935.1 1473 1873 +
ChrX	stalkie_big_nohaplotig	exon	12121873	12122004	99	+	.	Parent=FBgn0051935.1.mrna1;Target=FBgn0051935.1 1874 2005 +
ChrX	stalkie_big_nohaplotig	exon	12122071	12122174	100	+	.	Parent=FBgn0051935.1.mrna1;Target=FBgn0051935.1 2006 2109 +
ChrX	stalkie_big_nohaplotig	exon	12122229	12122810	100	+	.	Parent=FBgn0051935.1.mrna1;Target=FBgn0051935.1 2110 2691 +
ChrX	stalkie_big_nohaplotig	CDS	12112744	12114051	.	+	0	Parent=FBgn0051935.1.mrna1;Target=FBgn0051935.1 1 1308 +
ChrX	stalkie_big_nohaplotig	CDS	12114148	12114311	.	+	0	Parent=FBgn0051935.1.mrna1;Target=FBgn0051935.1 1309 1472 +
ChrX	stalkie_big_nohaplotig	CDS	12121366	12121766	.	+	1	Parent=FBgn0051935.1.mrna1;Target=FBgn0051935.1 1473 1873 +
ChrX	stalkie_big_nohaplotig	CDS	12121873	12122004	.	+	2	Parent=FBgn0051935.1.mrna1;Target=FBgn0051935.1 1874 2005 +
ChrX	stalkie_big_nohaplotig	CDS	12122071	12122174	.	+	2	Parent=FBgn0051935.1.mrna1;Target=FBgn0051935.1 2006 2109 +
ChrX	stalkie_big_nohaplotig	CDS	12122229	12122810	.	+	0	Parent=FBgn0051935.1.mrna1;Target=FBgn0051935.1 2110 2691 +
ChrX	gffcl	locus	12115419	12135329	.	-	.	ID=RLOC_00000669;geneIDs=FBgn0261509.1.path1,comp160557_c2_seq1.path1;transcripts=comp160557_c2_seq1.mrna1,FBgn0261509.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12115419	12135329	.	-	.	ID=comp160557_c2_seq1.mrna1;geneID=comp160557_c2_seq1.path1;Name=comp160557_c2_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=5438;mismatches=15;indels=3;unknowns=0;locus=RLOC_00000669
ChrX	stalkie_big_nohaplotig	exon	12115419	12117993	99	-	.	Parent=comp160557_c2_seq1.mrna1;Target=comp160557_c2_seq1 2881 5454 +
ChrX	stalkie_big_nohaplotig	exon	12118387	12118522	100	-	.	Parent=comp160557_c2_seq1.mrna1;Target=comp160557_c2_seq1 2745 2880 +
ChrX	stalkie_big_nohaplotig	exon	12118581	12119230	100	-	.	Parent=comp160557_c2_seq1.mrna1;Target=comp160557_c2_seq1 2095 2744 +
ChrX	stalkie_big_nohaplotig	exon	12119293	12119634	99	-	.	Parent=comp160557_c2_seq1.mrna1;Target=comp160557_c2_seq1 1753 2094 +
ChrX	stalkie_big_nohaplotig	exon	12119698	12120648	99	-	.	Parent=comp160557_c2_seq1.mrna1;Target=comp160557_c2_seq1 802 1752 +
ChrX	stalkie_big_nohaplotig	exon	12120709	12120914	100	-	.	Parent=comp160557_c2_seq1.mrna1;Target=comp160557_c2_seq1 596 801 +
ChrX	stalkie_big_nohaplotig	exon	12134735	12135329	98	-	.	Parent=comp160557_c2_seq1.mrna1;Target=comp160557_c2_seq1 1 595 +
ChrX	stalkie_big_nohaplotig	CDS	12117865	12117993	.	-	0	Parent=comp160557_c2_seq1.mrna1;Target=comp160557_c2_seq1 2881 3009 +
ChrX	stalkie_big_nohaplotig	CDS	12118387	12118522	.	-	1	Parent=comp160557_c2_seq1.mrna1;Target=comp160557_c2_seq1 2745 2880 +
ChrX	stalkie_big_nohaplotig	CDS	12118581	12119230	.	-	0	Parent=comp160557_c2_seq1.mrna1;Target=comp160557_c2_seq1 2095 2744 +
ChrX	stalkie_big_nohaplotig	CDS	12119293	12119634	.	-	0	Parent=comp160557_c2_seq1.mrna1;Target=comp160557_c2_seq1 1753 2094 +
ChrX	stalkie_big_nohaplotig	CDS	12119698	12120648	.	-	0	Parent=comp160557_c2_seq1.mrna1;Target=comp160557_c2_seq1 802 1752 +
ChrX	stalkie_big_nohaplotig	CDS	12120709	12120861	.	-	0	Parent=comp160557_c2_seq1.mrna1;Target=comp160557_c2_seq1 649 801 +
ChrX	stalkie_big_nohaplotig	mRNA	12116563	12120882	.	-	.	ID=FBgn0261509.1.mrna1;geneID=FBgn0261509.1.path1;Name=FBgn0261509.1;Dir=sensecoverage=100.0;identity=99.8;matches=2842;mismatches=5;indels=0;unknowns=0;locus=RLOC_00000669
ChrX	stalkie_big_nohaplotig	exon	12116563	12116689	100	-	.	Parent=FBgn0261509.1.mrna1;Target=FBgn0261509.1 2721 2847 +
ChrX	stalkie_big_nohaplotig	exon	12117445	12117726	100	-	.	Parent=FBgn0261509.1.mrna1;Target=FBgn0261509.1 2439 2720 +
ChrX	stalkie_big_nohaplotig	exon	12117869	12117993	100	-	.	Parent=FBgn0261509.1.mrna1;Target=FBgn0261509.1 2314 2438 +
ChrX	stalkie_big_nohaplotig	exon	12118387	12118522	100	-	.	Parent=FBgn0261509.1.mrna1;Target=FBgn0261509.1 2178 2313 +
ChrX	stalkie_big_nohaplotig	exon	12118581	12119230	100	-	.	Parent=FBgn0261509.1.mrna1;Target=FBgn0261509.1 1528 2177 +
ChrX	stalkie_big_nohaplotig	exon	12119293	12119634	99	-	.	Parent=FBgn0261509.1.mrna1;Target=FBgn0261509.1 1186 1527 +
ChrX	stalkie_big_nohaplotig	exon	12119698	12120882	99	-	.	Parent=FBgn0261509.1.mrna1;Target=FBgn0261509.1 1 1185 +
ChrX	stalkie_big_nohaplotig	CDS	12116563	12116689	.	-	1	Parent=FBgn0261509.1.mrna1;Target=FBgn0261509.1 2721 2847 +
ChrX	stalkie_big_nohaplotig	CDS	12117445	12117726	.	-	1	Parent=FBgn0261509.1.mrna1;Target=FBgn0261509.1 2439 2720 +
ChrX	stalkie_big_nohaplotig	CDS	12117869	12117993	.	-	0	Parent=FBgn0261509.1.mrna1;Target=FBgn0261509.1 2314 2438 +
ChrX	stalkie_big_nohaplotig	CDS	12118387	12118522	.	-	1	Parent=FBgn0261509.1.mrna1;Target=FBgn0261509.1 2178 2313 +
ChrX	stalkie_big_nohaplotig	CDS	12118581	12119230	.	-	0	Parent=FBgn0261509.1.mrna1;Target=FBgn0261509.1 1528 2177 +
ChrX	stalkie_big_nohaplotig	CDS	12119293	12119634	.	-	0	Parent=FBgn0261509.1.mrna1;Target=FBgn0261509.1 1186 1527 +
ChrX	stalkie_big_nohaplotig	CDS	12119698	12120882	.	-	0	Parent=FBgn0261509.1.mrna1;Target=FBgn0261509.1 1 1185 +
ChrX	gffcl	locus	12150433	12157509	.	+	.	ID=RLOC_00000670;geneIDs=FBgn0261268.1.path1;transcripts=FBgn0261268.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12150433	12157509	.	+	.	ID=FBgn0261268.1.mrna1;geneID=FBgn0261268.1.path1;Name=FBgn0261268.1;Dir=sensecoverage=100.0;identity=100.0;matches=2382;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000670
ChrX	stalkie_big_nohaplotig	exon	12150433	12150546	100	+	.	Parent=FBgn0261268.1.mrna1;Target=FBgn0261268.1 1 114 +
ChrX	stalkie_big_nohaplotig	exon	12151991	12152374	100	+	.	Parent=FBgn0261268.1.mrna1;Target=FBgn0261268.1 115 498 +
ChrX	stalkie_big_nohaplotig	exon	12152432	12152695	100	+	.	Parent=FBgn0261268.1.mrna1;Target=FBgn0261268.1 499 762 +
ChrX	stalkie_big_nohaplotig	exon	12152756	12153253	100	+	.	Parent=FBgn0261268.1.mrna1;Target=FBgn0261268.1 763 1260 +
ChrX	stalkie_big_nohaplotig	exon	12153312	12153482	100	+	.	Parent=FBgn0261268.1.mrna1;Target=FBgn0261268.1 1261 1431 +
ChrX	stalkie_big_nohaplotig	exon	12153537	12153707	100	+	.	Parent=FBgn0261268.1.mrna1;Target=FBgn0261268.1 1432 1602 +
ChrX	stalkie_big_nohaplotig	exon	12154928	12155042	100	+	.	Parent=FBgn0261268.1.mrna1;Target=FBgn0261268.1 1603 1717 +
ChrX	stalkie_big_nohaplotig	exon	12155108	12155259	100	+	.	Parent=FBgn0261268.1.mrna1;Target=FBgn0261268.1 1718 1869 +
ChrX	stalkie_big_nohaplotig	exon	12155330	12155553	100	+	.	Parent=FBgn0261268.1.mrna1;Target=FBgn0261268.1 1870 2093 +
ChrX	stalkie_big_nohaplotig	exon	12157124	12157262	100	+	.	Parent=FBgn0261268.1.mrna1;Target=FBgn0261268.1 2094 2232 +
ChrX	stalkie_big_nohaplotig	exon	12157360	12157509	100	+	.	Parent=FBgn0261268.1.mrna1;Target=FBgn0261268.1 2233 2382 +
ChrX	stalkie_big_nohaplotig	CDS	12150433	12150546	.	+	0	Parent=FBgn0261268.1.mrna1;Target=FBgn0261268.1 1 114 +
ChrX	stalkie_big_nohaplotig	CDS	12151991	12152374	.	+	0	Parent=FBgn0261268.1.mrna1;Target=FBgn0261268.1 115 498 +
ChrX	stalkie_big_nohaplotig	CDS	12152432	12152695	.	+	0	Parent=FBgn0261268.1.mrna1;Target=FBgn0261268.1 499 762 +
ChrX	stalkie_big_nohaplotig	CDS	12152756	12153253	.	+	0	Parent=FBgn0261268.1.mrna1;Target=FBgn0261268.1 763 1260 +
ChrX	stalkie_big_nohaplotig	CDS	12153312	12153482	.	+	0	Parent=FBgn0261268.1.mrna1;Target=FBgn0261268.1 1261 1431 +
ChrX	stalkie_big_nohaplotig	CDS	12153537	12153707	.	+	0	Parent=FBgn0261268.1.mrna1;Target=FBgn0261268.1 1432 1602 +
ChrX	stalkie_big_nohaplotig	CDS	12154928	12155042	.	+	0	Parent=FBgn0261268.1.mrna1;Target=FBgn0261268.1 1603 1717 +
ChrX	stalkie_big_nohaplotig	CDS	12155108	12155259	.	+	2	Parent=FBgn0261268.1.mrna1;Target=FBgn0261268.1 1718 1869 +
ChrX	stalkie_big_nohaplotig	CDS	12155330	12155553	.	+	0	Parent=FBgn0261268.1.mrna1;Target=FBgn0261268.1 1870 2093 +
ChrX	stalkie_big_nohaplotig	CDS	12157124	12157262	.	+	1	Parent=FBgn0261268.1.mrna1;Target=FBgn0261268.1 2094 2232 +
ChrX	stalkie_big_nohaplotig	CDS	12157360	12157509	.	+	0	Parent=FBgn0261268.1.mrna1;Target=FBgn0261268.1 2233 2382 +
ChrX	gffcl	locus	12158648	12159045	.	+	.	ID=RLOC_00000671;geneIDs=comp147631_c0_seq1.path1;transcripts=comp147631_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12158648	12159045	.	+	.	ID=comp147631_c0_seq1.mrna1;geneID=comp147631_c0_seq1.path1;Name=comp147631_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.7;matches=397;mismatches=1;indels=0;unknowns=0;Target=comp147631_c0_seq1 401 4 .;CDS_Target=comp147631_c0_seq1 145 5 .;locus=RLOC_00000671
ChrX	stalkie_big_nohaplotig	exon	12158648	12159045	99	+	.	Parent=comp147631_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12158649	12158789	.	+	0	Parent=comp147631_c0_seq1.mrna1
ChrX	gffcl	locus	12159240	12161397	.	+	.	ID=RLOC_00000672;geneIDs=comp157335_c0_seq1.path1;transcripts=comp157335_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12159240	12161397	.	+	.	ID=comp157335_c0_seq1.mrna1;geneID=comp157335_c0_seq1.path1;Name=comp157335_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=2152;mismatches=6;indels=0;unknowns=0;Target=comp157335_c0_seq1 2158 1 .;CDS_Target=comp157335_c0_seq1 1214 1071 .;locus=RLOC_00000672
ChrX	stalkie_big_nohaplotig	exon	12159240	12161397	99	+	.	Parent=comp157335_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12160310	12160453	.	+	0	Parent=comp157335_c0_seq1.mrna1
ChrX	gffcl	locus	12164122	12164309	.	-	.	ID=RLOC_00000673;geneIDs=comp131809_c0_seq1.path1;transcripts=comp131809_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12164122	12164309	.	-	.	ID=comp131809_c0_seq1.mrna1;geneID=comp131809_c0_seq1.path1;Name=comp131809_c0_seq1;Dir=indeterminatecoverage=100.0;identity=79.2;matches=175;mismatches=11;indels=35;unknowns=0;Target=comp131809_c0_seq1 219 1 .;CDS_Target=comp131809_c0_seq1 179 108 .;locus=RLOC_00000673
ChrX	stalkie_big_nohaplotig	exon	12164122	12164309	79	-	.	Parent=comp131809_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12164164	12164206	.	-	0	Parent=comp131809_c0_seq1.mrna1
ChrX	gffcl	locus	12171913	12174018	.	+	.	ID=RLOC_00000674;geneIDs=ORF887.path1;transcripts=ORF887.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12171913	12174018	.	+	.	ID=ORF887.mrna1;geneID=ORF887.path1;Name=ORF887;Dir=sensecoverage=100.0;identity=98.5;matches=1341;mismatches=21;indels=0;unknowns=0;locus=RLOC_00000674
ChrX	stalkie_big_nohaplotig	exon	12171913	12172200	100	+	.	Parent=ORF887.mrna1;Target=ORF887 1 288 +
ChrX	stalkie_big_nohaplotig	exon	12172446	12172724	100	+	.	Parent=ORF887.mrna1;Target=ORF887 289 567 +
ChrX	stalkie_big_nohaplotig	exon	12173224	12174018	97	+	.	Parent=ORF887.mrna1;Target=ORF887 568 1362 +
ChrX	stalkie_big_nohaplotig	CDS	12171913	12172200	.	+	0	Parent=ORF887.mrna1;Target=ORF887 1 288 +
ChrX	stalkie_big_nohaplotig	CDS	12172446	12172724	.	+	0	Parent=ORF887.mrna1;Target=ORF887 289 567 +
ChrX	stalkie_big_nohaplotig	CDS	12173224	12174018	.	+	0	Parent=ORF887.mrna1;Target=ORF887 568 1362 +
ChrX	gffcl	locus	12177151	12189773	.	+	.	ID=RLOC_00000675;geneIDs=FBgn0045842.1.path1;transcripts=FBgn0045842.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12177151	12189773	.	+	.	ID=FBgn0045842.1.mrna1;geneID=FBgn0045842.1.path1;Name=FBgn0045842.1;Dir=sensecoverage=100.0;identity=100.0;matches=2642;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000675
ChrX	stalkie_big_nohaplotig	exon	12177151	12178089	100	+	.	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 1 939 +
ChrX	stalkie_big_nohaplotig	exon	12178922	12179162	99	+	.	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 940 1180 +
ChrX	stalkie_big_nohaplotig	exon	12179252	12179340	100	+	.	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 1181 1269 +
ChrX	stalkie_big_nohaplotig	exon	12179459	12179611	100	+	.	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 1270 1422 +
ChrX	stalkie_big_nohaplotig	exon	12179680	12179760	100	+	.	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 1423 1503 +
ChrX	stalkie_big_nohaplotig	exon	12187897	12188197	100	+	.	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 1504 1804 +
ChrX	stalkie_big_nohaplotig	exon	12188536	12188741	100	+	.	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 1805 2010 +
ChrX	stalkie_big_nohaplotig	exon	12188862	12189130	100	+	.	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 2011 2279 +
ChrX	stalkie_big_nohaplotig	exon	12189197	12189322	100	+	.	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 2280 2405 +
ChrX	stalkie_big_nohaplotig	exon	12189378	12189479	100	+	.	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 2406 2507 +
ChrX	stalkie_big_nohaplotig	exon	12189538	12189568	100	+	.	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 2508 2538 +
ChrX	stalkie_big_nohaplotig	exon	12189669	12189773	100	+	.	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 2539 2643 +
ChrX	stalkie_big_nohaplotig	CDS	12177151	12178089	.	+	0	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 1 939 +
ChrX	stalkie_big_nohaplotig	CDS	12178922	12179162	.	+	0	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 940 1180 +
ChrX	stalkie_big_nohaplotig	CDS	12179252	12179340	.	+	2	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 1181 1269 +
ChrX	stalkie_big_nohaplotig	CDS	12179459	12179611	.	+	0	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 1270 1422 +
ChrX	stalkie_big_nohaplotig	CDS	12179680	12179760	.	+	0	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 1423 1503 +
ChrX	stalkie_big_nohaplotig	CDS	12187897	12188197	.	+	0	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 1504 1804 +
ChrX	stalkie_big_nohaplotig	CDS	12188536	12188741	.	+	2	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 1805 2010 +
ChrX	stalkie_big_nohaplotig	CDS	12188862	12189130	.	+	0	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 2011 2279 +
ChrX	stalkie_big_nohaplotig	CDS	12189197	12189322	.	+	1	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 2280 2405 +
ChrX	stalkie_big_nohaplotig	CDS	12189378	12189479	.	+	1	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 2406 2507 +
ChrX	stalkie_big_nohaplotig	CDS	12189538	12189568	.	+	1	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 2508 2538 +
ChrX	stalkie_big_nohaplotig	CDS	12189669	12189773	.	+	0	Parent=FBgn0045842.1.mrna1;Target=FBgn0045842.1 2539 2643 +
ChrX	gffcl	locus	12192801	12221652	.	+	.	ID=RLOC_00000676;geneIDs=FBgn0003475.1.path1;transcripts=FBgn0003475.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12192801	12221652	.	+	.	ID=FBgn0003475.1.mrna1;geneID=FBgn0003475.1.path1;Name=FBgn0003475.1;Dir=sensecoverage=100.0;identity=99.8;matches=3123;mismatches=6;indels=0;unknowns=0;locus=RLOC_00000676
ChrX	stalkie_big_nohaplotig	exon	12192801	12193308	99	+	.	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 1 508 +
ChrX	stalkie_big_nohaplotig	exon	12200624	12200652	100	+	.	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 509 537 +
ChrX	stalkie_big_nohaplotig	exon	12207869	12207986	100	+	.	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 538 655 +
ChrX	stalkie_big_nohaplotig	exon	12208422	12208528	100	+	.	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 656 762 +
ChrX	stalkie_big_nohaplotig	exon	12208765	12208879	100	+	.	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 763 877 +
ChrX	stalkie_big_nohaplotig	exon	12210534	12210610	100	+	.	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 878 954 +
ChrX	stalkie_big_nohaplotig	exon	12211729	12211859	100	+	.	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 955 1085 +
ChrX	stalkie_big_nohaplotig	exon	12211936	12212047	100	+	.	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 1086 1197 +
ChrX	stalkie_big_nohaplotig	exon	12213712	12213844	100	+	.	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 1198 1330 +
ChrX	stalkie_big_nohaplotig	exon	12217750	12217952	100	+	.	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 1331 1533 +
ChrX	stalkie_big_nohaplotig	exon	12218022	12218208	100	+	.	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 1534 1720 +
ChrX	stalkie_big_nohaplotig	exon	12219085	12219260	100	+	.	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 1721 1896 +
ChrX	stalkie_big_nohaplotig	exon	12219342	12219468	100	+	.	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 1897 2023 +
ChrX	stalkie_big_nohaplotig	exon	12219556	12219827	100	+	.	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 2024 2295 +
ChrX	stalkie_big_nohaplotig	exon	12219883	12220086	100	+	.	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 2296 2499 +
ChrX	stalkie_big_nohaplotig	exon	12220957	12221375	100	+	.	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 2500 2918 +
ChrX	stalkie_big_nohaplotig	exon	12221442	12221652	99	+	.	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 2919 3129 +
ChrX	stalkie_big_nohaplotig	CDS	12192801	12193308	.	+	0	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 1 508 +
ChrX	stalkie_big_nohaplotig	CDS	12200624	12200652	.	+	2	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 509 537 +
ChrX	stalkie_big_nohaplotig	CDS	12207869	12207986	.	+	0	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 538 655 +
ChrX	stalkie_big_nohaplotig	CDS	12208422	12208528	.	+	2	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 656 762 +
ChrX	stalkie_big_nohaplotig	CDS	12208765	12208879	.	+	0	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 763 877 +
ChrX	stalkie_big_nohaplotig	CDS	12210534	12210610	.	+	2	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 878 954 +
ChrX	stalkie_big_nohaplotig	CDS	12211729	12211859	.	+	0	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 955 1085 +
ChrX	stalkie_big_nohaplotig	CDS	12211936	12212047	.	+	1	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 1086 1197 +
ChrX	stalkie_big_nohaplotig	CDS	12213712	12213844	.	+	0	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 1198 1330 +
ChrX	stalkie_big_nohaplotig	CDS	12217750	12217952	.	+	2	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 1331 1533 +
ChrX	stalkie_big_nohaplotig	CDS	12218022	12218208	.	+	0	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 1534 1720 +
ChrX	stalkie_big_nohaplotig	CDS	12219085	12219260	.	+	2	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 1721 1896 +
ChrX	stalkie_big_nohaplotig	CDS	12219342	12219468	.	+	0	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 1897 2023 +
ChrX	stalkie_big_nohaplotig	CDS	12219556	12219827	.	+	2	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 2024 2295 +
ChrX	stalkie_big_nohaplotig	CDS	12219883	12220086	.	+	0	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 2296 2499 +
ChrX	stalkie_big_nohaplotig	CDS	12220957	12221375	.	+	0	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 2500 2918 +
ChrX	stalkie_big_nohaplotig	CDS	12221442	12221652	.	+	1	Parent=FBgn0003475.1.mrna1;Target=FBgn0003475.1 2919 3129 +
ChrX	gffcl	locus	12213239	12213374	.	-	.	ID=RLOC_00000677;geneIDs=comp158334_c1_seq1.path2;transcripts=comp158334_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	12213239	12213374	.	-	.	ID=comp158334_c1_seq1.mrna2;geneID=comp158334_c1_seq1.path2;Name=comp158334_c1_seq1;Dir=indeterminatecoverage=11.0;identity=100.0;matches=136;mismatches=0;indels=0;unknowns=0;Target=comp158334_c1_seq1 1231 1096 .;locus=RLOC_00000677
ChrX	stalkie_big_nohaplotig	exon	12213239	12213374	100	-	.	Parent=comp158334_c1_seq1.mrna2
ChrX	gffcl	locus	12223848	12225137	.	-	.	ID=RLOC_00000678;geneIDs=FBgn0011638.2.path1;transcripts=FBgn0011638.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12223848	12225137	.	-	.	ID=FBgn0011638.2.mrna1;geneID=FBgn0011638.2.path1;Name=FBgn0011638.2;Dir=sensecoverage=100.0;identity=100.0;matches=1182;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000678
ChrX	stalkie_big_nohaplotig	exon	12223848	12224039	100	-	.	Parent=FBgn0011638.2.mrna1;Target=FBgn0011638.2 991 1182 +
ChrX	stalkie_big_nohaplotig	exon	12224089	12224409	100	-	.	Parent=FBgn0011638.2.mrna1;Target=FBgn0011638.2 670 990 +
ChrX	stalkie_big_nohaplotig	exon	12224469	12225137	100	-	.	Parent=FBgn0011638.2.mrna1;Target=FBgn0011638.2 1 669 +
ChrX	stalkie_big_nohaplotig	CDS	12223848	12224039	.	-	0	Parent=FBgn0011638.2.mrna1;Target=FBgn0011638.2 991 1182 +
ChrX	stalkie_big_nohaplotig	CDS	12224089	12224409	.	-	0	Parent=FBgn0011638.2.mrna1;Target=FBgn0011638.2 670 990 +
ChrX	stalkie_big_nohaplotig	CDS	12224469	12225137	.	-	0	Parent=FBgn0011638.2.mrna1;Target=FBgn0011638.2 1 669 +
ChrX	gffcl	locus	12230645	12231621	.	-	.	ID=RLOC_00000679;geneIDs=FBgn0036811.1.path1;transcripts=FBgn0036811.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12230645	12231621	.	-	.	ID=FBgn0036811.1.mrna1;geneID=FBgn0036811.1.path1;Name=FBgn0036811.1;Dir=sensecoverage=100.0;identity=100.0;matches=810;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000679
ChrX	stalkie_big_nohaplotig	exon	12230645	12230746	100	-	.	Parent=FBgn0036811.1.mrna1;Target=FBgn0036811.1 709 810 +
ChrX	stalkie_big_nohaplotig	exon	12230861	12231261	100	-	.	Parent=FBgn0036811.1.mrna1;Target=FBgn0036811.1 308 708 +
ChrX	stalkie_big_nohaplotig	exon	12231315	12231621	100	-	.	Parent=FBgn0036811.1.mrna1;Target=FBgn0036811.1 1 307 +
ChrX	stalkie_big_nohaplotig	CDS	12230645	12230746	.	-	0	Parent=FBgn0036811.1.mrna1;Target=FBgn0036811.1 709 810 +
ChrX	stalkie_big_nohaplotig	CDS	12230861	12231261	.	-	2	Parent=FBgn0036811.1.mrna1;Target=FBgn0036811.1 308 708 +
ChrX	stalkie_big_nohaplotig	CDS	12231315	12231621	.	-	0	Parent=FBgn0036811.1.mrna1;Target=FBgn0036811.1 1 307 +
ChrX	gffcl	locus	12245138	12265752	.	+	.	ID=RLOC_00000680;geneIDs=FBgn0015803.1.path1,comp161755_c0_seq1.path1;transcripts=FBgn0015803.1.mrna1,comp161755_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12245138	12265752	.	+	.	ID=FBgn0015803.1.mrna1;geneID=FBgn0015803.1.path1;Name=FBgn0015803.1;Dir=sensecoverage=100.0;identity=99.8;matches=2027;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000680
ChrX	stalkie_big_nohaplotig	exon	12245138	12245511	99	+	.	Parent=FBgn0015803.1.mrna1;Target=FBgn0015803.1 1 374 +
ChrX	stalkie_big_nohaplotig	exon	12245589	12245789	99	+	.	Parent=FBgn0015803.1.mrna1;Target=FBgn0015803.1 375 575 +
ChrX	stalkie_big_nohaplotig	exon	12245853	12246051	100	+	.	Parent=FBgn0015803.1.mrna1;Target=FBgn0015803.1 576 774 +
ChrX	stalkie_big_nohaplotig	exon	12246167	12246263	100	+	.	Parent=FBgn0015803.1.mrna1;Target=FBgn0015803.1 775 871 +
ChrX	stalkie_big_nohaplotig	exon	12246321	12246445	99	+	.	Parent=FBgn0015803.1.mrna1;Target=FBgn0015803.1 872 996 +
ChrX	stalkie_big_nohaplotig	exon	12246513	12246761	100	+	.	Parent=FBgn0015803.1.mrna1;Target=FBgn0015803.1 997 1245 +
ChrX	stalkie_big_nohaplotig	exon	12251305	12251650	100	+	.	Parent=FBgn0015803.1.mrna1;Target=FBgn0015803.1 1246 1591 +
ChrX	stalkie_big_nohaplotig	exon	12252623	12252877	100	+	.	Parent=FBgn0015803.1.mrna1;Target=FBgn0015803.1 1592 1846 +
ChrX	stalkie_big_nohaplotig	exon	12265568	12265752	100	+	.	Parent=FBgn0015803.1.mrna1;Target=FBgn0015803.1 1847 2031 +
ChrX	stalkie_big_nohaplotig	CDS	12245138	12245511	.	+	0	Parent=FBgn0015803.1.mrna1;Target=FBgn0015803.1 1 374 +
ChrX	stalkie_big_nohaplotig	CDS	12245589	12245789	.	+	1	Parent=FBgn0015803.1.mrna1;Target=FBgn0015803.1 375 575 +
ChrX	stalkie_big_nohaplotig	CDS	12245853	12246051	.	+	1	Parent=FBgn0015803.1.mrna1;Target=FBgn0015803.1 576 774 +
ChrX	stalkie_big_nohaplotig	CDS	12246167	12246263	.	+	0	Parent=FBgn0015803.1.mrna1;Target=FBgn0015803.1 775 871 +
ChrX	stalkie_big_nohaplotig	CDS	12246321	12246445	.	+	2	Parent=FBgn0015803.1.mrna1;Target=FBgn0015803.1 872 996 +
ChrX	stalkie_big_nohaplotig	CDS	12246513	12246761	.	+	0	Parent=FBgn0015803.1.mrna1;Target=FBgn0015803.1 997 1245 +
ChrX	stalkie_big_nohaplotig	CDS	12251305	12251650	.	+	0	Parent=FBgn0015803.1.mrna1;Target=FBgn0015803.1 1246 1591 +
ChrX	stalkie_big_nohaplotig	CDS	12252623	12252877	.	+	2	Parent=FBgn0015803.1.mrna1;Target=FBgn0015803.1 1592 1846 +
ChrX	stalkie_big_nohaplotig	CDS	12265568	12265752	.	+	2	Parent=FBgn0015803.1.mrna1;Target=FBgn0015803.1 1847 2031 +
ChrX	stalkie_big_nohaplotig	mRNA	12252854	12258769	.	+	.	ID=comp161755_c0_seq1.mrna1;geneID=comp161755_c0_seq1.path1;Name=comp161755_c0_seq1;Dir=antisensecoverage=100.0;identity=99.2;matches=2111;mismatches=15;indels=2;unknowns=0;locus=RLOC_00000680
ChrX	stalkie_big_nohaplotig	exon	12252854	12252877	100	+	.	Parent=comp161755_c0_seq1.mrna1;Target=comp161755_c0_seq1 2104 2127 -
ChrX	stalkie_big_nohaplotig	exon	12256667	12258769	99	+	.	Parent=comp161755_c0_seq1.mrna1;Target=comp161755_c0_seq1 1 2103 -
ChrX	stalkie_big_nohaplotig	CDS	12252856	12252877	.	+	0	Parent=comp161755_c0_seq1.mrna1;Target=comp161755_c0_seq1 2104 2125 .
ChrX	stalkie_big_nohaplotig	CDS	12256667	12257616	.	+	2	Parent=comp161755_c0_seq1.mrna1;Target=comp161755_c0_seq1 1154 2103 .
ChrX	gffcl	locus	12247512	12266767	.	+	.	ID=RLOC_00000681;geneIDs=comp135133_c0_seq1.path1;transcripts=comp135133_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12247512	12266767	.	+	.	ID=comp135133_c0_seq1.mrna1;geneID=comp135133_c0_seq1.path1;Name=comp135133_c0_seq1;Dir=indeterminatecoverage=93.0;identity=99.3;matches=555;mismatches=1;indels=3;unknowns=0;Target=comp135133_c0_seq1 586 464 .;locus=RLOC_00000681
ChrX	stalkie_big_nohaplotig	exon	12247512	12247527	100	+	.	Parent=comp135133_c0_seq1.mrna1;Target=comp135133_c0_seq1 57 42 .
ChrX	stalkie_big_nohaplotig	exon	12248561	12248563	100	+	.	Parent=comp135133_c0_seq1.mrna1;Target=comp135133_c0_seq1 60 58 .
ChrX	stalkie_big_nohaplotig	exon	12252518	12252521	100	+	.	Parent=comp135133_c0_seq1.mrna1;Target=comp135133_c0_seq1 64 61 .
ChrX	stalkie_big_nohaplotig	exon	12260115	12260119	100	+	.	Parent=comp135133_c0_seq1.mrna1;Target=comp135133_c0_seq1 69 65 .
ChrX	stalkie_big_nohaplotig	exon	12266184	12266537	99	+	.	Parent=comp135133_c0_seq1.mrna1;Target=comp135133_c0_seq1 423 70 .
ChrX	stalkie_big_nohaplotig	exon	12266591	12266767	98	+	.	Parent=comp135133_c0_seq1.mrna1;Target=comp135133_c0_seq1 597 424 .
ChrX	stalkie_big_nohaplotig	CDS	12266634	12266756	.	+	0	Parent=comp135133_c0_seq1.mrna1
ChrX	gffcl	locus	12264095	12264703	.	-	.	ID=RLOC_00000682;geneIDs=comp137375_c0_seq1.path1;transcripts=comp137375_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12264095	12264703	.	-	.	ID=comp137375_c0_seq1.mrna1;geneID=comp137375_c0_seq1.path1;Name=comp137375_c0_seq1;Dir=indeterminatecoverage=80.5;identity=99.5;matches=607;mismatches=2;indels=1;unknowns=0;Target=comp137375_c0_seq1 610 1 .;CDS_Target=comp137375_c0_seq1 171 97 .;locus=RLOC_00000682
ChrX	stalkie_big_nohaplotig	exon	12264095	12264703	99	-	.	Parent=comp137375_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12264534	12264608	.	-	0	Parent=comp137375_c0_seq1.mrna1
ChrX	gffcl	locus	12267350	12268298	.	-	.	ID=RLOC_00000683;geneIDs=comp147616_c0_seq1.path1;transcripts=comp147616_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12267350	12268298	.	-	.	ID=comp147616_c0_seq1.mrna1;geneID=comp147616_c0_seq1.path1;Name=comp147616_c0_seq1;Dir=indeterminatecoverage=91.9;identity=99.7;matches=946;mismatches=3;indels=0;unknowns=0;Target=comp147616_c0_seq1 1009 61 .;CDS_Target=comp147616_c0_seq1 639 550 .;locus=RLOC_00000683
ChrX	stalkie_big_nohaplotig	exon	12267350	12268298	99	-	.	Parent=comp147616_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12267720	12267809	.	-	0	Parent=comp147616_c0_seq1.mrna1
ChrX	gffcl	locus	12270493	12285556	.	-	.	ID=RLOC_00000684;geneIDs=FBgn0032856.1.path1;transcripts=FBgn0032856.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12270493	12285556	.	-	.	ID=FBgn0032856.1.mrna1;geneID=FBgn0032856.1.path1;Name=FBgn0032856.1;Dir=sensecoverage=98.3;identity=99.8;matches=1448;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000684
ChrX	stalkie_big_nohaplotig	exon	12270493	12270716	100	-	.	Parent=FBgn0032856.1.mrna1;Target=FBgn0032856.1 1253 1476 +
ChrX	stalkie_big_nohaplotig	exon	12270997	12271436	100	-	.	Parent=FBgn0032856.1.mrna1;Target=FBgn0032856.1 813 1252 +
ChrX	stalkie_big_nohaplotig	exon	12272102	12272357	99	-	.	Parent=FBgn0032856.1.mrna1;Target=FBgn0032856.1 557 812 +
ChrX	stalkie_big_nohaplotig	exon	12272416	12272609	99	-	.	Parent=FBgn0032856.1.mrna1;Target=FBgn0032856.1 363 556 +
ChrX	stalkie_big_nohaplotig	exon	12272764	12273031	99	-	.	Parent=FBgn0032856.1.mrna1;Target=FBgn0032856.1 95 362 +
ChrX	stalkie_big_nohaplotig	exon	12285488	12285556	100	-	.	Parent=FBgn0032856.1.mrna1;Target=FBgn0032856.1 26 94 +
ChrX	stalkie_big_nohaplotig	CDS	12270493	12270716	.	-	2	Parent=FBgn0032856.1.mrna1;Target=FBgn0032856.1 1253 1476 +
ChrX	stalkie_big_nohaplotig	CDS	12270997	12271436	.	-	1	Parent=FBgn0032856.1.mrna1;Target=FBgn0032856.1 813 1252 +
ChrX	stalkie_big_nohaplotig	CDS	12272102	12272357	.	-	2	Parent=FBgn0032856.1.mrna1;Target=FBgn0032856.1 557 812 +
ChrX	stalkie_big_nohaplotig	CDS	12272416	12272609	.	-	1	Parent=FBgn0032856.1.mrna1;Target=FBgn0032856.1 363 556 +
ChrX	stalkie_big_nohaplotig	CDS	12272764	12273031	.	-	2	Parent=FBgn0032856.1.mrna1;Target=FBgn0032856.1 95 362 +
ChrX	stalkie_big_nohaplotig	CDS	12285488	12285554	.	-	0	Parent=FBgn0032856.1.mrna1;Target=FBgn0032856.1 28 94 +
ChrX	gffcl	locus	12330744	12332991	.	-	.	ID=RLOC_00000686;geneIDs=ORF274.path1;transcripts=ORF274.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12330744	12332991	.	-	.	ID=ORF274.mrna1;geneID=ORF274.path1;Name=ORF274;Dir=sensecoverage=99.7;identity=100.0;matches=2180;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000686
ChrX	stalkie_big_nohaplotig	exon	12330744	12332382	100	-	.	Parent=ORF274.mrna1;Target=ORF274 542 2180 +
ChrX	stalkie_big_nohaplotig	exon	12332451	12332991	100	-	.	Parent=ORF274.mrna1;Target=ORF274 1 541 +
ChrX	stalkie_big_nohaplotig	CDS	12330746	12332382	.	-	2	Parent=ORF274.mrna1;Target=ORF274 542 2178 +
ChrX	stalkie_big_nohaplotig	CDS	12332451	12332991	.	-	0	Parent=ORF274.mrna1;Target=ORF274 1 541 +
ChrX	gffcl	locus	12451299	12452100	.	+	.	ID=RLOC_00000688;geneIDs=FBgn0034654.5.path1;transcripts=FBgn0034654.5.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12451299	12452100	.	+	.	ID=FBgn0034654.5.mrna1;geneID=FBgn0034654.5.path1;Name=FBgn0034654.5;Dir=sensecoverage=100.0;identity=100.0;matches=684;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000688
ChrX	stalkie_big_nohaplotig	exon	12451299	12451390	100	+	.	Parent=FBgn0034654.5.mrna1;Target=FBgn0034654.5 1 92 +
ChrX	stalkie_big_nohaplotig	exon	12451453	12451892	100	+	.	Parent=FBgn0034654.5.mrna1;Target=FBgn0034654.5 93 532 +
ChrX	stalkie_big_nohaplotig	exon	12451949	12452100	100	+	.	Parent=FBgn0034654.5.mrna1;Target=FBgn0034654.5 533 684 +
ChrX	stalkie_big_nohaplotig	CDS	12451299	12451390	.	+	0	Parent=FBgn0034654.5.mrna1;Target=FBgn0034654.5 1 92 +
ChrX	stalkie_big_nohaplotig	CDS	12451453	12451892	.	+	1	Parent=FBgn0034654.5.mrna1;Target=FBgn0034654.5 93 532 +
ChrX	stalkie_big_nohaplotig	CDS	12451949	12452100	.	+	2	Parent=FBgn0034654.5.mrna1;Target=FBgn0034654.5 533 684 +
ChrX	gffcl	locus	12453027	12456791	.	-	.	ID=RLOC_00000689;geneIDs=FBgn0003687.2.path1;transcripts=FBgn0003687.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12453027	12456791	.	-	.	ID=FBgn0003687.2.mrna1;geneID=FBgn0003687.2.path1;Name=FBgn0003687.2;Dir=sensecoverage=100.0;identity=100.0;matches=1080;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000689
ChrX	stalkie_big_nohaplotig	exon	12453027	12453302	100	-	.	Parent=FBgn0003687.2.mrna1;Target=FBgn0003687.2 805 1080 +
ChrX	stalkie_big_nohaplotig	exon	12453360	12453603	100	-	.	Parent=FBgn0003687.2.mrna1;Target=FBgn0003687.2 561 804 +
ChrX	stalkie_big_nohaplotig	exon	12456142	12456281	100	-	.	Parent=FBgn0003687.2.mrna1;Target=FBgn0003687.2 421 560 +
ChrX	stalkie_big_nohaplotig	exon	12456372	12456791	100	-	.	Parent=FBgn0003687.2.mrna1;Target=FBgn0003687.2 1 420 +
ChrX	stalkie_big_nohaplotig	CDS	12453027	12453302	.	-	0	Parent=FBgn0003687.2.mrna1;Target=FBgn0003687.2 805 1080 +
ChrX	stalkie_big_nohaplotig	CDS	12453360	12453603	.	-	1	Parent=FBgn0003687.2.mrna1;Target=FBgn0003687.2 561 804 +
ChrX	stalkie_big_nohaplotig	CDS	12456142	12456281	.	-	0	Parent=FBgn0003687.2.mrna1;Target=FBgn0003687.2 421 560 +
ChrX	stalkie_big_nohaplotig	CDS	12456372	12456791	.	-	0	Parent=FBgn0003687.2.mrna1;Target=FBgn0003687.2 1 420 +
ChrX	gffcl	locus	12462219	12462822	.	-	.	ID=RLOC_00000691;geneIDs=FBgn0260861.1.path1;transcripts=FBgn0260861.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12462219	12462822	.	-	.	ID=FBgn0260861.1.mrna1;geneID=FBgn0260861.1.path1;Name=FBgn0260861.1;Dir=sensecoverage=100.0;identity=99.8;matches=542;mismatches=0;indels=1;unknowns=0;Target=FBgn0260861.1 3 41 +;locus=RLOC_00000691
ChrX	stalkie_big_nohaplotig	exon	12462219	12462700	100	-	.	Parent=FBgn0260861.1.mrna1;Target=FBgn0260861.1 62 543 +
ChrX	stalkie_big_nohaplotig	exon	12462763	12462822	98	-	.	Parent=FBgn0260861.1.mrna1;Target=FBgn0260861.1 1 61 +
ChrX	stalkie_big_nohaplotig	CDS	12462783	12462820	.	-	0	Parent=FBgn0260861.1.mrna1
ChrX	gffcl	locus	12465277	12465738	.	-	.	ID=RLOC_00000692;geneIDs=FBgn0032059.1.path1;transcripts=FBgn0032059.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12465277	12465738	.	-	.	ID=FBgn0032059.1.mrna1;geneID=FBgn0032059.1.path1;Name=FBgn0032059.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=462;mismatches=0;indels=0;unknowns=0;Target=FBgn0032059.1 462 1 .;locus=RLOC_00000692
ChrX	stalkie_big_nohaplotig	exon	12465277	12465738	100	-	.	Parent=FBgn0032059.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12465277	12465738	.	-	0	Parent=FBgn0032059.1.mrna1
ChrX	gffcl	locus	12466899	12468146	.	+	.	ID=RLOC_00000693;geneIDs=comp115039_c0_seq1.path1;transcripts=comp115039_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12466899	12468146	.	+	.	ID=comp115039_c0_seq1.mrna1;geneID=comp115039_c0_seq1.path1;Name=comp115039_c0_seq1;Dir=indeterminatecoverage=98.2;identity=99.8;matches=1245;mismatches=3;indels=0;unknowns=0;Target=comp115039_c0_seq1 1248 1 .;CDS_Target=comp115039_c0_seq1 150 1 .;locus=RLOC_00000693
ChrX	stalkie_big_nohaplotig	exon	12466899	12468146	99	+	.	Parent=comp115039_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12466899	12467048	.	+	0	Parent=comp115039_c0_seq1.mrna1
ChrX	gffcl	locus	12486364	12486901	.	+	.	ID=RLOC_00000695;geneIDs=comp113386_c0_seq1.path1,comp334431_c0_seq1.path1;transcripts=comp334431_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12486559	12486901	.	+	.	ID=comp334431_c0_seq1.mrna1;geneID=comp334431_c0_seq1.path1;Name=comp334431_c0_seq1;Dir=indeterminatecoverage=99.1;identity=100.0;matches=343;mismatches=0;indels=0;unknowns=0;Target=comp334431_c0_seq1 343 1 .;CDS_Target=comp334431_c0_seq1 83 3 .;locus=RLOC_00000695
ChrX	stalkie_big_nohaplotig	exon	12486559	12486901	100	+	.	Parent=comp334431_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12486561	12486641	.	+	0	Parent=comp334431_c0_seq1.mrna1
ChrX	gffcl	locus	12487815	12490109	.	-	.	ID=RLOC_00000696;geneIDs=comp144666_c0_seq1.path1;transcripts=comp144666_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12487815	12490109	.	-	.	ID=comp144666_c0_seq1.mrna1;geneID=comp144666_c0_seq1.path1;Name=comp144666_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.9;matches=2294;mismatches=1;indels=1;unknowns=0;Target=comp144666_c0_seq1 2296 1 .;CDS_Target=comp144666_c0_seq1 108 1 .;locus=RLOC_00000696
ChrX	stalkie_big_nohaplotig	exon	12487815	12490109	99	-	.	Parent=comp144666_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12490002	12490109	.	-	0	Parent=comp144666_c0_seq1.mrna1
ChrX	gffcl	locus	12491937	12495823	.	-	.	ID=RLOC_00000697;geneIDs=FBgn0031895.1.path1;transcripts=FBgn0031895.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12491937	12495823	.	-	.	ID=FBgn0031895.1.mrna1;geneID=FBgn0031895.1.path1;Name=FBgn0031895.1;Dir=sensecoverage=100.0;identity=100.0;matches=1668;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000697
ChrX	stalkie_big_nohaplotig	exon	12491937	12492672	100	-	.	Parent=FBgn0031895.1.mrna1;Target=FBgn0031895.1 933 1668 +
ChrX	stalkie_big_nohaplotig	exon	12494758	12494961	100	-	.	Parent=FBgn0031895.1.mrna1;Target=FBgn0031895.1 729 932 +
ChrX	stalkie_big_nohaplotig	exon	12495031	12495381	100	-	.	Parent=FBgn0031895.1.mrna1;Target=FBgn0031895.1 378 728 +
ChrX	stalkie_big_nohaplotig	exon	12495447	12495823	100	-	.	Parent=FBgn0031895.1.mrna1;Target=FBgn0031895.1 1 377 +
ChrX	stalkie_big_nohaplotig	CDS	12491937	12492672	.	-	1	Parent=FBgn0031895.1.mrna1;Target=FBgn0031895.1 933 1668 +
ChrX	stalkie_big_nohaplotig	CDS	12494758	12494961	.	-	1	Parent=FBgn0031895.1.mrna1;Target=FBgn0031895.1 729 932 +
ChrX	stalkie_big_nohaplotig	CDS	12495031	12495381	.	-	1	Parent=FBgn0031895.1.mrna1;Target=FBgn0031895.1 378 728 +
ChrX	stalkie_big_nohaplotig	CDS	12495447	12495823	.	-	0	Parent=FBgn0031895.1.mrna1;Target=FBgn0031895.1 1 377 +
ChrX	gffcl	locus	12504502	12507220	.	-	.	ID=RLOC_00000698;geneIDs=FBgn0031896.1.path1;transcripts=FBgn0031896.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12504502	12507220	.	-	.	ID=FBgn0031896.1.mrna1;geneID=FBgn0031896.1.path1;Name=FBgn0031896.1;Dir=sensecoverage=100.0;identity=100.0;matches=762;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000698
ChrX	stalkie_big_nohaplotig	exon	12504502	12504583	100	-	.	Parent=FBgn0031896.1.mrna1;Target=FBgn0031896.1 681 762 +
ChrX	stalkie_big_nohaplotig	exon	12506325	12506674	100	-	.	Parent=FBgn0031896.1.mrna1;Target=FBgn0031896.1 331 680 +
ChrX	stalkie_big_nohaplotig	exon	12506834	12506999	100	-	.	Parent=FBgn0031896.1.mrna1;Target=FBgn0031896.1 165 330 +
ChrX	stalkie_big_nohaplotig	exon	12507057	12507220	100	-	.	Parent=FBgn0031896.1.mrna1;Target=FBgn0031896.1 1 164 +
ChrX	stalkie_big_nohaplotig	CDS	12504502	12504583	.	-	1	Parent=FBgn0031896.1.mrna1;Target=FBgn0031896.1 681 762 +
ChrX	stalkie_big_nohaplotig	CDS	12506325	12506674	.	-	0	Parent=FBgn0031896.1.mrna1;Target=FBgn0031896.1 331 680 +
ChrX	stalkie_big_nohaplotig	CDS	12506834	12506999	.	-	1	Parent=FBgn0031896.1.mrna1;Target=FBgn0031896.1 165 330 +
ChrX	stalkie_big_nohaplotig	CDS	12507057	12507220	.	-	0	Parent=FBgn0031896.1.mrna1;Target=FBgn0031896.1 1 164 +
ChrX	gffcl	locus	12504562	12509153	.	+	.	ID=RLOC_00000699;geneIDs=comp150207_c0_seq1.path1;transcripts=comp150207_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12504562	12509153	.	+	.	ID=comp150207_c0_seq1.mrna1;geneID=comp150207_c0_seq1.path1;Name=comp150207_c0_seq1;Dir=sensecoverage=87.0;identity=99.8;matches=661;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000699
ChrX	stalkie_big_nohaplotig	exon	12504562	12504585	100	+	.	Parent=comp150207_c0_seq1.mrna1;Target=comp150207_c0_seq1 1 24 +
ChrX	stalkie_big_nohaplotig	exon	12508342	12508431	100	+	.	Parent=comp150207_c0_seq1.mrna1;Target=comp150207_c0_seq1 25 114 +
ChrX	stalkie_big_nohaplotig	exon	12508516	12508687	100	+	.	Parent=comp150207_c0_seq1.mrna1;Target=comp150207_c0_seq1 115 286 +
ChrX	stalkie_big_nohaplotig	exon	12508778	12509153	99	+	.	Parent=comp150207_c0_seq1.mrna1;Target=comp150207_c0_seq1 287 662 +
ChrX	stalkie_big_nohaplotig	CDS	12508556	12508687	.	+	0	Parent=comp150207_c0_seq1.mrna1;Target=comp150207_c0_seq1 155 286 +
ChrX	stalkie_big_nohaplotig	CDS	12508778	12508786	.	+	0	Parent=comp150207_c0_seq1.mrna1;Target=comp150207_c0_seq1 287 295 +
ChrX	gffcl	locus	12524656	12525511	.	-	.	ID=RLOC_00000700;geneIDs=comp56799_c0_seq1.path1;transcripts=comp56799_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12524656	12525511	.	-	.	ID=comp56799_c0_seq1.mrna1;geneID=comp56799_c0_seq1.path1;Name=comp56799_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.1;matches=848;mismatches=5;indels=3;unknowns=0;Target=comp56799_c0_seq1 862 10 .;CDS_Target=comp56799_c0_seq1 179 78 .;locus=RLOC_00000700
ChrX	stalkie_big_nohaplotig	exon	12524656	12525511	99	-	.	Parent=comp56799_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12525339	12525440	.	-	0	Parent=comp56799_c0_seq1.mrna1
ChrX	gffcl	locus	12526074	12526442	.	+	.	ID=RLOC_00000701;geneIDs=comp75759_c0_seq1.path1;transcripts=comp75759_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12526074	12526442	.	+	.	ID=comp75759_c0_seq1.mrna1;geneID=comp75759_c0_seq1.path1;Name=comp75759_c0_seq1;Dir=indeterminatecoverage=94.9;identity=100.0;matches=369;mismatches=0;indels=0;unknowns=0;Target=comp75759_c0_seq1 389 21 .;CDS_Target=comp75759_c0_seq1 219 127 .;locus=RLOC_00000701
ChrX	stalkie_big_nohaplotig	exon	12526074	12526442	100	+	.	Parent=comp75759_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12526180	12526272	.	+	0	Parent=comp75759_c0_seq1.mrna1
ChrX	gffcl	locus	12526604	12527292	.	+	.	ID=RLOC_00000702;geneIDs=comp53823_c0_seq1.path1;transcripts=comp53823_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12526604	12527292	.	+	.	ID=comp53823_c0_seq1.mrna1;geneID=comp53823_c0_seq1.path1;Name=comp53823_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=689;mismatches=0;indels=0;unknowns=0;Target=comp53823_c0_seq1 689 1 .;CDS_Target=comp53823_c0_seq1 405 316 .;locus=RLOC_00000702
ChrX	stalkie_big_nohaplotig	exon	12526604	12527292	100	+	.	Parent=comp53823_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12526919	12527008	.	+	0	Parent=comp53823_c0_seq1.mrna1
ChrX	gffcl	locus	12531492	12564651	.	-	.	ID=RLOC_00000703;geneIDs=FBgn0031897.path1;transcripts=FBgn0031897.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12531492	12564651	.	-	.	ID=FBgn0031897.mrna1;geneID=FBgn0031897.path1;Name=FBgn0031897;Dir=sensecoverage=100.0;identity=99.9;matches=860;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000703
ChrX	stalkie_big_nohaplotig	exon	12531492	12531572	100	-	.	Parent=FBgn0031897.mrna1;Target=FBgn0031897 781 861 +
ChrX	stalkie_big_nohaplotig	exon	12531664	12531818	100	-	.	Parent=FBgn0031897.mrna1;Target=FBgn0031897 626 780 +
ChrX	stalkie_big_nohaplotig	exon	12531935	12532099	100	-	.	Parent=FBgn0031897.mrna1;Target=FBgn0031897 461 625 +
ChrX	stalkie_big_nohaplotig	exon	12534170	12534277	100	-	.	Parent=FBgn0031897.mrna1;Target=FBgn0031897 353 460 +
ChrX	stalkie_big_nohaplotig	exon	12534347	12534477	99	-	.	Parent=FBgn0031897.mrna1;Target=FBgn0031897 222 352 +
ChrX	stalkie_big_nohaplotig	exon	12564431	12564651	100	-	.	Parent=FBgn0031897.mrna1;Target=FBgn0031897 1 221 +
ChrX	stalkie_big_nohaplotig	CDS	12531492	12531572	.	-	0	Parent=FBgn0031897.mrna1;Target=FBgn0031897 781 861 +
ChrX	stalkie_big_nohaplotig	CDS	12531664	12531818	.	-	2	Parent=FBgn0031897.mrna1;Target=FBgn0031897 626 780 +
ChrX	stalkie_big_nohaplotig	CDS	12531935	12532099	.	-	2	Parent=FBgn0031897.mrna1;Target=FBgn0031897 461 625 +
ChrX	stalkie_big_nohaplotig	CDS	12534170	12534277	.	-	2	Parent=FBgn0031897.mrna1;Target=FBgn0031897 353 460 +
ChrX	stalkie_big_nohaplotig	CDS	12534347	12534477	.	-	1	Parent=FBgn0031897.mrna1;Target=FBgn0031897 222 352 +
ChrX	stalkie_big_nohaplotig	CDS	12564431	12564651	.	-	0	Parent=FBgn0031897.mrna1;Target=FBgn0031897 1 221 +
ChrX	gffcl	locus	12568701	12569542	.	+	.	ID=RLOC_00000704;geneIDs=FBgn0031708.1.path1;transcripts=FBgn0031708.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12568701	12569542	.	+	.	ID=FBgn0031708.1.mrna1;geneID=FBgn0031708.1.path1;Name=FBgn0031708.1;Dir=sensecoverage=100.0;identity=99.9;matches=731;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000704
ChrX	stalkie_big_nohaplotig	exon	12568701	12569084	100	+	.	Parent=FBgn0031708.1.mrna1;Target=FBgn0031708.1 1 384 +
ChrX	stalkie_big_nohaplotig	exon	12569138	12569320	99	+	.	Parent=FBgn0031708.1.mrna1;Target=FBgn0031708.1 385 567 +
ChrX	stalkie_big_nohaplotig	exon	12569378	12569542	100	+	.	Parent=FBgn0031708.1.mrna1;Target=FBgn0031708.1 568 732 +
ChrX	stalkie_big_nohaplotig	CDS	12568701	12569084	.	+	0	Parent=FBgn0031708.1.mrna1;Target=FBgn0031708.1 1 384 +
ChrX	stalkie_big_nohaplotig	CDS	12569138	12569320	.	+	0	Parent=FBgn0031708.1.mrna1;Target=FBgn0031708.1 385 567 +
ChrX	stalkie_big_nohaplotig	CDS	12569378	12569542	.	+	0	Parent=FBgn0031708.1.mrna1;Target=FBgn0031708.1 568 732 +
ChrX	gffcl	locus	12570992	12571685	.	+	.	ID=RLOC_00000705;geneIDs=comp151386_c0_seq1.path1;transcripts=comp151386_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12570992	12571685	.	+	.	ID=comp151386_c0_seq1.mrna1;geneID=comp151386_c0_seq1.path1;Name=comp151386_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.0;matches=689;mismatches=5;indels=2;unknowns=0;Target=comp151386_c0_seq1 696 1 .;CDS_Target=comp151386_c0_seq1 271 221 .;locus=RLOC_00000705
ChrX	stalkie_big_nohaplotig	exon	12570992	12571685	98	+	.	Parent=comp151386_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12571212	12571260	.	+	0	Parent=comp151386_c0_seq1.mrna1
ChrX	gffcl	locus	12623700	12624881	.	+	.	ID=RLOC_00000706;geneIDs=FBgn0000064.2.path1;transcripts=FBgn0000064.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12623700	12624881	.	+	.	ID=FBgn0000064.2.mrna1;geneID=FBgn0000064.2.path1;Name=FBgn0000064.2;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1179;mismatches=3;indels=0;unknowns=0;Target=FBgn0000064.2 1182 1 .;locus=RLOC_00000706
ChrX	stalkie_big_nohaplotig	exon	12623700	12624881	99	+	.	Parent=FBgn0000064.2.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12623700	12624881	.	+	0	Parent=FBgn0000064.2.mrna1
ChrX	gffcl	locus	12693264	12693502	.	+	.	ID=RLOC_00000707;geneIDs=comp494699_c0_seq1.path1;transcripts=comp494699_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12693264	12693502	.	+	.	ID=comp494699_c0_seq1.mrna1;geneID=comp494699_c0_seq1.path1;Name=comp494699_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=239;mismatches=0;indels=0;unknowns=0;Target=comp494699_c0_seq1 239 1 .;CDS_Target=comp494699_c0_seq1 120 1 .;locus=RLOC_00000707
ChrX	stalkie_big_nohaplotig	exon	12693264	12693502	100	+	.	Parent=comp494699_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12693264	12693383	.	+	0	Parent=comp494699_c0_seq1.mrna1
ChrX	gffcl	locus	12694308	12709268	.	-	.	ID=RLOC_00000708;geneIDs=FBgn0261963.1.path1;transcripts=FBgn0261963.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12694308	12709268	.	-	.	ID=FBgn0261963.1.mrna1;geneID=FBgn0261963.1.path1;Name=FBgn0261963.1;Dir=sensecoverage=100.0;identity=99.9;matches=1703;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000708
ChrX	stalkie_big_nohaplotig	exon	12694308	12695081	99	-	.	Parent=FBgn0261963.1.mrna1;Target=FBgn0261963.1 931 1704 +
ChrX	stalkie_big_nohaplotig	exon	12696051	12696336	100	-	.	Parent=FBgn0261963.1.mrna1;Target=FBgn0261963.1 645 930 +
ChrX	stalkie_big_nohaplotig	exon	12699606	12699999	100	-	.	Parent=FBgn0261963.1.mrna1;Target=FBgn0261963.1 251 644 +
ChrX	stalkie_big_nohaplotig	exon	12709019	12709268	100	-	.	Parent=FBgn0261963.1.mrna1;Target=FBgn0261963.1 1 250 +
ChrX	stalkie_big_nohaplotig	CDS	12694308	12695081	.	-	0	Parent=FBgn0261963.1.mrna1;Target=FBgn0261963.1 931 1704 +
ChrX	stalkie_big_nohaplotig	CDS	12696051	12696336	.	-	1	Parent=FBgn0261963.1.mrna1;Target=FBgn0261963.1 645 930 +
ChrX	stalkie_big_nohaplotig	CDS	12699606	12699999	.	-	2	Parent=FBgn0261963.1.mrna1;Target=FBgn0261963.1 251 644 +
ChrX	stalkie_big_nohaplotig	CDS	12709019	12709268	.	-	0	Parent=FBgn0261963.1.mrna1;Target=FBgn0261963.1 1 250 +
ChrX	gffcl	locus	12709553	12710007	.	+	.	ID=RLOC_00000709;geneIDs=comp118274_c0_seq1.path1;transcripts=comp118274_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12709553	12710007	.	+	.	ID=comp118274_c0_seq1.mrna1;geneID=comp118274_c0_seq1.path1;Name=comp118274_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=454;mismatches=1;indels=1;unknowns=0;Target=comp118274_c0_seq1 456 1 .;CDS_Target=comp118274_c0_seq1 228 181 .;locus=RLOC_00000709
ChrX	stalkie_big_nohaplotig	exon	12709553	12710007	99	+	.	Parent=comp118274_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12709733	12709779	.	+	0	Parent=comp118274_c0_seq1.mrna1
ChrX	gffcl	locus	12902242	12903268	.	+	.	ID=RLOC_00000711;geneIDs=comp146371_c0_seq1.path1;transcripts=comp146371_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12902242	12903268	.	+	.	ID=comp146371_c0_seq1.mrna1;geneID=comp146371_c0_seq1.path1;Name=comp146371_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=1003;mismatches=11;indels=17;unknowns=0;Target=comp146371_c0_seq1 1018 1 .;CDS_Target=comp146371_c0_seq1 590 411 .;locus=RLOC_00000711
ChrX	stalkie_big_nohaplotig	exon	12902242	12903268	97	+	.	Parent=comp146371_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	12902661	12902840	.	+	0	Parent=comp146371_c0_seq1.mrna1
ChrX	gffcl	locus	12991256	12993084	.	+	.	ID=RLOC_00000712;geneIDs=ORF479.path1;transcripts=ORF479.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	12991256	12993084	.	+	.	ID=ORF479.mrna1;geneID=ORF479.path1;Name=ORF479;Dir=sensecoverage=97.0;identity=99.7;matches=1698;mismatches=5;indels=0;unknowns=0;locus=RLOC_00000712
ChrX	stalkie_big_nohaplotig	exon	12991256	12991639	100	+	.	Parent=ORF479.mrna1;Target=ORF479 53 436 +
ChrX	stalkie_big_nohaplotig	exon	12991691	12992474	99	+	.	Parent=ORF479.mrna1;Target=ORF479 437 1220 +
ChrX	stalkie_big_nohaplotig	exon	12992550	12993084	99	+	.	Parent=ORF479.mrna1;Target=ORF479 1221 1755 +
ChrX	stalkie_big_nohaplotig	CDS	12991258	12991639	.	+	0	Parent=ORF479.mrna1;Target=ORF479 55 436 +
ChrX	stalkie_big_nohaplotig	CDS	12991691	12992474	.	+	2	Parent=ORF479.mrna1;Target=ORF479 437 1220 +
ChrX	stalkie_big_nohaplotig	CDS	12992550	12993084	.	+	1	Parent=ORF479.mrna1;Target=ORF479 1221 1755 +
ChrX	gffcl	locus	13030361	13031729	.	-	.	ID=RLOC_00000713;geneIDs=ORF1017.path1;transcripts=ORF1017.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13030361	13031729	.	-	.	ID=ORF1017.mrna1;geneID=ORF1017.path1;Name=ORF1017;Dir=sensecoverage=100.0;identity=98.5;matches=1259;mismatches=19;indels=0;unknowns=0;locus=RLOC_00000713
ChrX	stalkie_big_nohaplotig	exon	13030361	13031527	98	-	.	Parent=ORF1017.mrna1;Target=ORF1017 112 1278 +
ChrX	stalkie_big_nohaplotig	exon	13031619	13031729	100	-	.	Parent=ORF1017.mrna1;Target=ORF1017 1 111 +
ChrX	stalkie_big_nohaplotig	CDS	13030361	13031527	.	-	0	Parent=ORF1017.mrna1;Target=ORF1017 112 1278 +
ChrX	stalkie_big_nohaplotig	CDS	13031619	13031729	.	-	0	Parent=ORF1017.mrna1;Target=ORF1017 1 111 +
ChrX	gffcl	locus	13034623	13082652	.	-	.	ID=RLOC_00000714;geneIDs=FBgn0016920.1.path1,comp153329_c0_seq1.path1;transcripts=comp153329_c0_seq1.mrna1,FBgn0016920.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13034623	13082652	.	-	.	ID=comp153329_c0_seq1.mrna1;geneID=comp153329_c0_seq1.path1;Name=comp153329_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=5509;mismatches=7;indels=2;unknowns=0;locus=RLOC_00000714
ChrX	stalkie_big_nohaplotig	exon	13034623	13035542	99	-	.	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 4599 5518 +
ChrX	stalkie_big_nohaplotig	exon	13035886	13035994	100	-	.	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 4490 4598 +
ChrX	stalkie_big_nohaplotig	exon	13048621	13049314	99	-	.	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 3796 4489 +
ChrX	stalkie_big_nohaplotig	exon	13050001	13050207	100	-	.	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 3589 3795 +
ChrX	stalkie_big_nohaplotig	exon	13050265	13050801	99	-	.	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 3052 3588 +
ChrX	stalkie_big_nohaplotig	exon	13050859	13052286	99	-	.	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 1624 3051 +
ChrX	stalkie_big_nohaplotig	exon	13052353	13052655	99	-	.	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 1321 1623 +
ChrX	stalkie_big_nohaplotig	exon	13052751	13053046	100	-	.	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 1025 1320 +
ChrX	stalkie_big_nohaplotig	exon	13053103	13053316	100	-	.	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 811 1024 +
ChrX	stalkie_big_nohaplotig	exon	13054609	13054701	100	-	.	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 718 810 +
ChrX	stalkie_big_nohaplotig	exon	13062001	13062117	100	-	.	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 601 717 +
ChrX	stalkie_big_nohaplotig	exon	13066077	13066178	100	-	.	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 499 600 +
ChrX	stalkie_big_nohaplotig	exon	13075128	13075229	100	-	.	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 397 498 +
ChrX	stalkie_big_nohaplotig	exon	13082258	13082652	100	-	.	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 2 396 +
ChrX	stalkie_big_nohaplotig	CDS	13035461	13035542	.	-	1	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 4599 4680 +
ChrX	stalkie_big_nohaplotig	CDS	13035886	13035994	.	-	2	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 4490 4598 +
ChrX	stalkie_big_nohaplotig	CDS	13048621	13049314	.	-	0	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 3796 4489 +
ChrX	stalkie_big_nohaplotig	CDS	13050001	13050207	.	-	0	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 3589 3795 +
ChrX	stalkie_big_nohaplotig	CDS	13050265	13050801	.	-	0	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 3052 3588 +
ChrX	stalkie_big_nohaplotig	CDS	13050859	13052286	.	-	0	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 1624 3051 +
ChrX	stalkie_big_nohaplotig	CDS	13052353	13052655	.	-	0	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 1321 1623 +
ChrX	stalkie_big_nohaplotig	CDS	13052751	13053046	.	-	2	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 1025 1320 +
ChrX	stalkie_big_nohaplotig	CDS	13053103	13053316	.	-	0	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 811 1024 +
ChrX	stalkie_big_nohaplotig	CDS	13054609	13054701	.	-	0	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 718 810 +
ChrX	stalkie_big_nohaplotig	CDS	13062001	13062117	.	-	0	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 601 717 +
ChrX	stalkie_big_nohaplotig	CDS	13066077	13066178	.	-	0	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 499 600 +
ChrX	stalkie_big_nohaplotig	CDS	13075128	13075229	.	-	0	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 397 498 +
ChrX	stalkie_big_nohaplotig	CDS	13082258	13082650	.	-	0	Parent=comp153329_c0_seq1.mrna1;Target=comp153329_c0_seq1 4 396 +
ChrX	stalkie_big_nohaplotig	mRNA	13041998	13082652	.	-	.	ID=FBgn0016920.1.mrna1;geneID=FBgn0016920.1.path1;Name=FBgn0016920.1;Dir=sensecoverage=100.0;identity=99.8;matches=4758;mismatches=8;indels=0;unknowns=0;locus=RLOC_00000714
ChrX	stalkie_big_nohaplotig	exon	13041998	13042275	99	-	.	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 4490 4767 +
ChrX	stalkie_big_nohaplotig	exon	13048621	13049314	99	-	.	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 3796 4489 +
ChrX	stalkie_big_nohaplotig	exon	13050001	13050207	100	-	.	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 3589 3795 +
ChrX	stalkie_big_nohaplotig	exon	13050265	13050801	99	-	.	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 3052 3588 +
ChrX	stalkie_big_nohaplotig	exon	13050859	13052286	99	-	.	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 1624 3051 +
ChrX	stalkie_big_nohaplotig	exon	13052353	13052655	99	-	.	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 1321 1623 +
ChrX	stalkie_big_nohaplotig	exon	13052751	13053046	100	-	.	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 1025 1320 +
ChrX	stalkie_big_nohaplotig	exon	13053103	13053316	100	-	.	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 811 1024 +
ChrX	stalkie_big_nohaplotig	exon	13054609	13054701	100	-	.	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 718 810 +
ChrX	stalkie_big_nohaplotig	exon	13062001	13062117	100	-	.	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 601 717 +
ChrX	stalkie_big_nohaplotig	exon	13066077	13066178	100	-	.	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 499 600 +
ChrX	stalkie_big_nohaplotig	exon	13075128	13075229	100	-	.	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 397 498 +
ChrX	stalkie_big_nohaplotig	exon	13082258	13082652	100	-	.	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 2 396 +
ChrX	stalkie_big_nohaplotig	CDS	13041998	13042275	.	-	2	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 4490 4767 +
ChrX	stalkie_big_nohaplotig	CDS	13048621	13049314	.	-	0	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 3796 4489 +
ChrX	stalkie_big_nohaplotig	CDS	13050001	13050207	.	-	0	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 3589 3795 +
ChrX	stalkie_big_nohaplotig	CDS	13050265	13050801	.	-	0	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 3052 3588 +
ChrX	stalkie_big_nohaplotig	CDS	13050859	13052286	.	-	0	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 1624 3051 +
ChrX	stalkie_big_nohaplotig	CDS	13052353	13052655	.	-	0	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 1321 1623 +
ChrX	stalkie_big_nohaplotig	CDS	13052751	13053046	.	-	2	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 1025 1320 +
ChrX	stalkie_big_nohaplotig	CDS	13053103	13053316	.	-	0	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 811 1024 +
ChrX	stalkie_big_nohaplotig	CDS	13054609	13054701	.	-	0	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 718 810 +
ChrX	stalkie_big_nohaplotig	CDS	13062001	13062117	.	-	0	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 601 717 +
ChrX	stalkie_big_nohaplotig	CDS	13066077	13066178	.	-	0	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 499 600 +
ChrX	stalkie_big_nohaplotig	CDS	13075128	13075229	.	-	0	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 397 498 +
ChrX	stalkie_big_nohaplotig	CDS	13082258	13082650	.	-	0	Parent=FBgn0016920.1.mrna1;Target=FBgn0016920.1 4 396 +
ChrX	gffcl	locus	13036282	13036573	.	+	.	ID=RLOC_00000715;geneIDs=comp939703_c0_seq1.path1;transcripts=comp939703_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13036282	13036573	.	+	.	ID=comp939703_c0_seq1.mrna1;geneID=comp939703_c0_seq1.path1;Name=comp939703_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=291;mismatches=1;indels=0;unknowns=0;Target=comp939703_c0_seq1 292 1 .;CDS_Target=comp939703_c0_seq1 290 204 .;locus=RLOC_00000715
ChrX	stalkie_big_nohaplotig	exon	13036282	13036573	99	+	.	Parent=comp939703_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13036485	13036571	.	+	0	Parent=comp939703_c0_seq1.mrna1
ChrX	gffcl	locus	13037128	13039123	.	+	.	ID=RLOC_00000716;geneIDs=comp136710_c0_seq1.path1;transcripts=comp136710_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13037128	13039123	.	+	.	ID=comp136710_c0_seq1.mrna1;geneID=comp136710_c0_seq1.path1;Name=comp136710_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1987;mismatches=9;indels=6;unknowns=0;Target=comp136710_c0_seq1 2002 1 .;CDS_Target=comp136710_c0_seq1 1260 1069 .;locus=RLOC_00000716
ChrX	stalkie_big_nohaplotig	exon	13037128	13039123	99	+	.	Parent=comp136710_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13038196	13038387	.	+	0	Parent=comp136710_c0_seq1.mrna1
ChrX	gffcl	locus	13100130	13106456	.	+	.	ID=RLOC_00000717;geneIDs=FBgn0031981.1.path1;transcripts=FBgn0031981.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13100130	13106456	.	+	.	ID=FBgn0031981.1.mrna1;geneID=FBgn0031981.1.path1;Name=FBgn0031981.1;Dir=sensecoverage=100.0;identity=99.9;matches=6130;mismatches=7;indels=1;unknowns=0;Target=FBgn0031981.1 3 53 +;locus=RLOC_00000717
ChrX	stalkie_big_nohaplotig	exon	13100130	13100341	99	+	.	Parent=FBgn0031981.1.mrna1;Target=FBgn0031981.1 1 213 +
ChrX	stalkie_big_nohaplotig	exon	13100408	13105247	99	+	.	Parent=FBgn0031981.1.mrna1;Target=FBgn0031981.1 214 5053 +
ChrX	stalkie_big_nohaplotig	exon	13105372	13106456	99	+	.	Parent=FBgn0031981.1.mrna1;Target=FBgn0031981.1 5054 6138 +
ChrX	stalkie_big_nohaplotig	CDS	13100132	13100181	.	+	0	Parent=FBgn0031981.1.mrna1
ChrX	gffcl	locus	13108214	13110697	.	-	.	ID=RLOC_00000718;geneIDs=comp158133_c0_seq1.path1;transcripts=comp158133_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13108214	13110697	.	-	.	ID=comp158133_c0_seq1.mrna1;geneID=comp158133_c0_seq1.path1;Name=comp158133_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=2470;mismatches=11;indels=3;unknowns=0;Target=comp158133_c0_seq1 2481 1 .;CDS_Target=comp158133_c0_seq1 605 498 .;locus=RLOC_00000718
ChrX	stalkie_big_nohaplotig	exon	13108214	13110697	99	-	.	Parent=comp158133_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13110093	13110200	.	-	0	Parent=comp158133_c0_seq1.mrna1
ChrX	gffcl	locus	13110890	13111532	.	+	.	ID=RLOC_00000719;geneIDs=comp146716_c0_seq1.path1;transcripts=comp146716_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13110890	13111532	.	+	.	ID=comp146716_c0_seq1.mrna1;geneID=comp146716_c0_seq1.path1;Name=comp146716_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.7;matches=641;mismatches=2;indels=0;unknowns=0;Target=comp146716_c0_seq1 649 7 .;CDS_Target=comp146716_c0_seq1 647 561 .;locus=RLOC_00000719
ChrX	stalkie_big_nohaplotig	exon	13110890	13111532	99	+	.	Parent=comp146716_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13111444	13111530	.	+	0	Parent=comp146716_c0_seq1.mrna1
ChrX	gffcl	locus	13116927	13118444	.	+	.	ID=RLOC_00000720;geneIDs=FBgn0032408.1.path1;transcripts=FBgn0032408.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13116927	13118444	.	+	.	ID=FBgn0032408.1.mrna1;geneID=FBgn0032408.1.path1;Name=FBgn0032408.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1512;mismatches=6;indels=0;unknowns=0;Target=FBgn0032408.1 1518 1 .;locus=RLOC_00000720
ChrX	stalkie_big_nohaplotig	exon	13116927	13118444	99	+	.	Parent=FBgn0032408.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13116927	13118444	.	+	0	Parent=FBgn0032408.1.mrna1
ChrX	gffcl	locus	13142002	13142619	.	+	.	ID=RLOC_00000722;geneIDs=comp135952_c0_seq1.path1;transcripts=comp135952_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13142002	13142619	.	+	.	ID=comp135952_c0_seq1.mrna1;geneID=comp135952_c0_seq1.path1;Name=comp135952_c0_seq1;Dir=antisensecoverage=97.2;identity=99.8;matches=486;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000722
ChrX	stalkie_big_nohaplotig	exon	13142002	13142075	100	+	.	Parent=comp135952_c0_seq1.mrna1;Target=comp135952_c0_seq1 415 488 -
ChrX	stalkie_big_nohaplotig	exon	13142149	13142393	100	+	.	Parent=comp135952_c0_seq1.mrna1;Target=comp135952_c0_seq1 170 414 -
ChrX	stalkie_big_nohaplotig	exon	13142452	13142619	99	+	.	Parent=comp135952_c0_seq1.mrna1;Target=comp135952_c0_seq1 2 169 -
ChrX	stalkie_big_nohaplotig	CDS	13142066	13142075	.	+	0	Parent=comp135952_c0_seq1.mrna1;Target=comp135952_c0_seq1 415 424 .
ChrX	stalkie_big_nohaplotig	CDS	13142149	13142393	.	+	2	Parent=comp135952_c0_seq1.mrna1;Target=comp135952_c0_seq1 170 414 .
ChrX	stalkie_big_nohaplotig	CDS	13142452	13142619	.	+	0	Parent=comp135952_c0_seq1.mrna1;Target=comp135952_c0_seq1 2 169 .
ChrX	gffcl	locus	13152403	13155528	.	+	.	ID=RLOC_00000723;geneIDs=FBgn0003145.1.path1,comp134862_c1_seq1.path1;transcripts=FBgn0003145.1.mrna1,comp134862_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13152403	13155528	.	+	.	ID=FBgn0003145.1.mrna1;geneID=FBgn0003145.1.path1;Name=FBgn0003145.1;Dir=sensecoverage=100.0;identity=100.0;matches=1719;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000723
ChrX	stalkie_big_nohaplotig	exon	13152403	13152478	100	+	.	Parent=FBgn0003145.1.mrna1;Target=FBgn0003145.1 1 76 +
ChrX	stalkie_big_nohaplotig	exon	13153886	13155528	100	+	.	Parent=FBgn0003145.1.mrna1;Target=FBgn0003145.1 77 1719 +
ChrX	stalkie_big_nohaplotig	CDS	13152403	13152478	.	+	0	Parent=FBgn0003145.1.mrna1;Target=FBgn0003145.1 1 76 +
ChrX	stalkie_big_nohaplotig	CDS	13153886	13155528	.	+	2	Parent=FBgn0003145.1.mrna1;Target=FBgn0003145.1 77 1719 +
ChrX	stalkie_big_nohaplotig	mRNA	13152508	13155528	.	+	.	ID=comp134862_c1_seq1.mrna1;geneID=comp134862_c1_seq1.path1;Name=comp134862_c1_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=2027;mismatches=0;indels=4;unknowns=0;Target=comp134862_c1_seq1 1 1545 .;locus=RLOC_00000723
ChrX	stalkie_big_nohaplotig	exon	13152508	13152891	98	+	.	Parent=comp134862_c1_seq1.mrna1;Target=comp134862_c1_seq1 1644 2031 -
ChrX	stalkie_big_nohaplotig	exon	13153886	13155528	100	+	.	Parent=comp134862_c1_seq1.mrna1;Target=comp134862_c1_seq1 1 1643 -
ChrX	stalkie_big_nohaplotig	CDS	13153984	13155528	.	+	0	Parent=comp134862_c1_seq1.mrna1
ChrX	gffcl	locus	13175047	13176239	.	-	.	ID=RLOC_00000724;geneIDs=ORF1363.path1;transcripts=ORF1363.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13175047	13176239	.	-	.	ID=ORF1363.mrna1;geneID=ORF1363.path1;Name=ORF1363;Dir=sensecoverage=100.0;identity=99.7;matches=1122;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000724
ChrX	stalkie_big_nohaplotig	exon	13175047	13175736	99	-	.	Parent=ORF1363.mrna1;Target=ORF1363 436 1125 +
ChrX	stalkie_big_nohaplotig	exon	13175805	13176239	100	-	.	Parent=ORF1363.mrna1;Target=ORF1363 1 435 +
ChrX	stalkie_big_nohaplotig	CDS	13175047	13175736	.	-	0	Parent=ORF1363.mrna1;Target=ORF1363 436 1125 +
ChrX	stalkie_big_nohaplotig	CDS	13175805	13176239	.	-	0	Parent=ORF1363.mrna1;Target=ORF1363 1 435 +
ChrX	gffcl	locus	13192676	13203944	.	+	.	ID=RLOC_00000725;geneIDs=FBgn0032405.1.path1;transcripts=FBgn0032405.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13192676	13203944	.	+	.	ID=FBgn0032405.1.mrna1;geneID=FBgn0032405.1.path1;Name=FBgn0032405.1;Dir=sensecoverage=100.0;identity=99.9;matches=1025;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000725
ChrX	stalkie_big_nohaplotig	exon	13192676	13192773	100	+	.	Parent=FBgn0032405.1.mrna1;Target=FBgn0032405.1 1 98 +
ChrX	stalkie_big_nohaplotig	exon	13202739	13202892	100	+	.	Parent=FBgn0032405.1.mrna1;Target=FBgn0032405.1 99 252 +
ChrX	stalkie_big_nohaplotig	exon	13202964	13203118	99	+	.	Parent=FBgn0032405.1.mrna1;Target=FBgn0032405.1 253 407 +
ChrX	stalkie_big_nohaplotig	exon	13203192	13203552	100	+	.	Parent=FBgn0032405.1.mrna1;Target=FBgn0032405.1 408 768 +
ChrX	stalkie_big_nohaplotig	exon	13203623	13203786	100	+	.	Parent=FBgn0032405.1.mrna1;Target=FBgn0032405.1 769 932 +
ChrX	stalkie_big_nohaplotig	exon	13203851	13203944	100	+	.	Parent=FBgn0032405.1.mrna1;Target=FBgn0032405.1 933 1026 +
ChrX	stalkie_big_nohaplotig	CDS	13192676	13192773	.	+	0	Parent=FBgn0032405.1.mrna1;Target=FBgn0032405.1 1 98 +
ChrX	stalkie_big_nohaplotig	CDS	13202739	13202892	.	+	1	Parent=FBgn0032405.1.mrna1;Target=FBgn0032405.1 99 252 +
ChrX	stalkie_big_nohaplotig	CDS	13202964	13203118	.	+	0	Parent=FBgn0032405.1.mrna1;Target=FBgn0032405.1 253 407 +
ChrX	stalkie_big_nohaplotig	CDS	13203192	13203552	.	+	1	Parent=FBgn0032405.1.mrna1;Target=FBgn0032405.1 408 768 +
ChrX	stalkie_big_nohaplotig	CDS	13203623	13203786	.	+	0	Parent=FBgn0032405.1.mrna1;Target=FBgn0032405.1 769 932 +
ChrX	stalkie_big_nohaplotig	CDS	13203851	13203944	.	+	1	Parent=FBgn0032405.1.mrna1;Target=FBgn0032405.1 933 1026 +
ChrX	gffcl	locus	13205887	13211053	.	+	.	ID=RLOC_00000726;geneIDs=FBgn0027505.1.path1;transcripts=FBgn0027505.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13205887	13211053	.	+	.	ID=FBgn0027505.1.mrna1;geneID=FBgn0027505.1.path1;Name=FBgn0027505.1;Dir=sensecoverage=100.0;identity=100.0;matches=3980;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000726
ChrX	stalkie_big_nohaplotig	exon	13205887	13205986	100	+	.	Parent=FBgn0027505.1.mrna1;Target=FBgn0027505.1 1 100 +
ChrX	stalkie_big_nohaplotig	exon	13206051	13206357	100	+	.	Parent=FBgn0027505.1.mrna1;Target=FBgn0027505.1 101 407 +
ChrX	stalkie_big_nohaplotig	exon	13206420	13207342	100	+	.	Parent=FBgn0027505.1.mrna1;Target=FBgn0027505.1 408 1330 +
ChrX	stalkie_big_nohaplotig	exon	13207402	13208248	99	+	.	Parent=FBgn0027505.1.mrna1;Target=FBgn0027505.1 1331 2177 +
ChrX	stalkie_big_nohaplotig	exon	13208310	13208526	100	+	.	Parent=FBgn0027505.1.mrna1;Target=FBgn0027505.1 2178 2394 +
ChrX	stalkie_big_nohaplotig	exon	13208592	13208710	100	+	.	Parent=FBgn0027505.1.mrna1;Target=FBgn0027505.1 2395 2513 +
ChrX	stalkie_big_nohaplotig	exon	13208774	13209872	100	+	.	Parent=FBgn0027505.1.mrna1;Target=FBgn0027505.1 2514 3612 +
ChrX	stalkie_big_nohaplotig	exon	13209931	13210128	100	+	.	Parent=FBgn0027505.1.mrna1;Target=FBgn0027505.1 3613 3810 +
ChrX	stalkie_big_nohaplotig	exon	13210883	13211053	100	+	.	Parent=FBgn0027505.1.mrna1;Target=FBgn0027505.1 3811 3981 +
ChrX	stalkie_big_nohaplotig	CDS	13205887	13205986	.	+	0	Parent=FBgn0027505.1.mrna1;Target=FBgn0027505.1 1 100 +
ChrX	stalkie_big_nohaplotig	CDS	13206051	13206357	.	+	2	Parent=FBgn0027505.1.mrna1;Target=FBgn0027505.1 101 407 +
ChrX	stalkie_big_nohaplotig	CDS	13206420	13207342	.	+	1	Parent=FBgn0027505.1.mrna1;Target=FBgn0027505.1 408 1330 +
ChrX	stalkie_big_nohaplotig	CDS	13207402	13208248	.	+	2	Parent=FBgn0027505.1.mrna1;Target=FBgn0027505.1 1331 2177 +
ChrX	stalkie_big_nohaplotig	CDS	13208310	13208526	.	+	1	Parent=FBgn0027505.1.mrna1;Target=FBgn0027505.1 2178 2394 +
ChrX	stalkie_big_nohaplotig	CDS	13208592	13208710	.	+	0	Parent=FBgn0027505.1.mrna1;Target=FBgn0027505.1 2395 2513 +
ChrX	stalkie_big_nohaplotig	CDS	13208774	13209872	.	+	1	Parent=FBgn0027505.1.mrna1;Target=FBgn0027505.1 2514 3612 +
ChrX	stalkie_big_nohaplotig	CDS	13209931	13210128	.	+	0	Parent=FBgn0027505.1.mrna1;Target=FBgn0027505.1 3613 3810 +
ChrX	stalkie_big_nohaplotig	CDS	13210883	13211053	.	+	0	Parent=FBgn0027505.1.mrna1;Target=FBgn0027505.1 3811 3981 +
ChrX	gffcl	locus	13211195	13214104	.	-	.	ID=RLOC_00000727;geneIDs=comp151621_c0_seq1.path1;transcripts=comp151621_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13211195	13214104	.	-	.	ID=comp151621_c0_seq1.mrna1;geneID=comp151621_c0_seq1.path1;Name=comp151621_c0_seq1;Dir=antisensecoverage=94.7;identity=97.4;matches=784;mismatches=16;indels=5;unknowns=0;Target=comp151621_c0_seq1 175 621 .;locus=RLOC_00000727
ChrX	stalkie_big_nohaplotig	exon	13211195	13211795	97	-	.	Parent=comp151621_c0_seq1.mrna1;Target=comp151621_c0_seq1 46 641 -
ChrX	stalkie_big_nohaplotig	exon	13213901	13214104	98	-	.	Parent=comp151621_c0_seq1.mrna1;Target=comp151621_c0_seq1 642 845 -
ChrX	stalkie_big_nohaplotig	CDS	13211329	13211775	.	-	0	Parent=comp151621_c0_seq1.mrna1
ChrX	gffcl	locus	13216926	13217948	.	-	.	ID=RLOC_00000728;geneIDs=FBgn0032404.1.path1;transcripts=FBgn0032404.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13216926	13217948	.	-	.	ID=FBgn0032404.1.mrna1;geneID=FBgn0032404.1.path1;Name=FBgn0032404.1;Dir=sensecoverage=100.0;identity=99.6;matches=811;mismatches=1;indels=2;unknowns=0;locus=RLOC_00000728
ChrX	stalkie_big_nohaplotig	exon	13216926	13217036	99	-	.	Parent=FBgn0032404.1.mrna1;Target=FBgn0032404.1 703 813 +
ChrX	stalkie_big_nohaplotig	exon	13217090	13217435	99	-	.	Parent=FBgn0032404.1.mrna1;Target=FBgn0032404.1 357 702 +
ChrX	stalkie_big_nohaplotig	exon	13217535	13217831	100	-	.	Parent=FBgn0032404.1.mrna1;Target=FBgn0032404.1 60 356 +
ChrX	stalkie_big_nohaplotig	exon	13217890	13217948	100	-	.	Parent=FBgn0032404.1.mrna1;Target=FBgn0032404.1 1 59 +
ChrX	stalkie_big_nohaplotig	CDS	13216926	13217036	.	-	0	Parent=FBgn0032404.1.mrna1;Target=FBgn0032404.1 703 813 +
ChrX	stalkie_big_nohaplotig	CDS	13217090	13217435	.	-	1	Parent=FBgn0032404.1.mrna1;Target=FBgn0032404.1 357 702 +
ChrX	stalkie_big_nohaplotig	CDS	13217535	13217831	.	-	1	Parent=FBgn0032404.1.mrna1;Target=FBgn0032404.1 60 356 +
ChrX	stalkie_big_nohaplotig	CDS	13217890	13217948	.	-	0	Parent=FBgn0032404.1.mrna1;Target=FBgn0032404.1 1 59 +
ChrX	gffcl	locus	13219281	13219859	.	+	.	ID=RLOC_00000729;geneIDs=comp145182_c0_seq1.path1;transcripts=comp145182_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13219281	13219859	.	+	.	ID=comp145182_c0_seq1.mrna1;geneID=comp145182_c0_seq1.path1;Name=comp145182_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=578;mismatches=1;indels=0;unknowns=0;Target=comp145182_c0_seq1 579 1 .;CDS_Target=comp145182_c0_seq1 303 1 .;locus=RLOC_00000729
ChrX	stalkie_big_nohaplotig	exon	13219281	13219859	99	+	.	Parent=comp145182_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13219281	13219583	.	+	0	Parent=comp145182_c0_seq1.mrna1
ChrX	gffcl	locus	13220693	13221741	.	-	.	ID=RLOC_00000730;geneIDs=FBgn0033669.6.path1;transcripts=FBgn0033669.6.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13220693	13221741	.	-	.	ID=FBgn0033669.6.mrna1;geneID=FBgn0033669.6.path1;Name=FBgn0033669.6;Dir=sensecoverage=100.0;identity=100.0;matches=801;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000730
ChrX	stalkie_big_nohaplotig	exon	13220693	13220915	100	-	.	Parent=FBgn0033669.6.mrna1;Target=FBgn0033669.6 579 801 +
ChrX	stalkie_big_nohaplotig	exon	13220976	13221082	100	-	.	Parent=FBgn0033669.6.mrna1;Target=FBgn0033669.6 472 578 +
ChrX	stalkie_big_nohaplotig	exon	13221145	13221441	100	-	.	Parent=FBgn0033669.6.mrna1;Target=FBgn0033669.6 175 471 +
ChrX	stalkie_big_nohaplotig	exon	13221568	13221741	100	-	.	Parent=FBgn0033669.6.mrna1;Target=FBgn0033669.6 1 174 +
ChrX	stalkie_big_nohaplotig	CDS	13220693	13220915	.	-	1	Parent=FBgn0033669.6.mrna1;Target=FBgn0033669.6 579 801 +
ChrX	stalkie_big_nohaplotig	CDS	13220976	13221082	.	-	0	Parent=FBgn0033669.6.mrna1;Target=FBgn0033669.6 472 578 +
ChrX	stalkie_big_nohaplotig	CDS	13221145	13221441	.	-	0	Parent=FBgn0033669.6.mrna1;Target=FBgn0033669.6 175 471 +
ChrX	stalkie_big_nohaplotig	CDS	13221568	13221741	.	-	0	Parent=FBgn0033669.6.mrna1;Target=FBgn0033669.6 1 174 +
ChrX	gffcl	locus	13223166	13224894	.	+	.	ID=RLOC_00000731;geneIDs=comp150866_c0_seq1.path1;transcripts=comp150866_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13223166	13224894	.	+	.	ID=comp150866_c0_seq1.mrna1;geneID=comp150866_c0_seq1.path1;Name=comp150866_c0_seq1;Dir=sensecoverage=100.0;identity=98.3;matches=1636;mismatches=23;indels=6;unknowns=0;Target=comp150866_c0_seq1 495 623 +;locus=RLOC_00000731
ChrX	stalkie_big_nohaplotig	exon	13223166	13223844	97	+	.	Parent=comp150866_c0_seq1.mrna1;Target=comp150866_c0_seq1 1 681 +
ChrX	stalkie_big_nohaplotig	exon	13223915	13224894	98	+	.	Parent=comp150866_c0_seq1.mrna1;Target=comp150866_c0_seq1 682 1665 +
ChrX	stalkie_big_nohaplotig	CDS	13223659	13223786	.	+	0	Parent=comp150866_c0_seq1.mrna1
ChrX	gffcl	locus	13261272	13264422	.	+	.	ID=RLOC_00000733;geneIDs=FBgn0032402.1.path1;transcripts=FBgn0032402.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13261272	13264422	.	+	.	ID=FBgn0032402.1.mrna1;geneID=FBgn0032402.1.path1;Name=FBgn0032402.1;Dir=sensecoverage=100.0;identity=100.0;matches=1587;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000733
ChrX	stalkie_big_nohaplotig	exon	13261272	13262349	100	+	.	Parent=FBgn0032402.1.mrna1;Target=FBgn0032402.1 1 1078 +
ChrX	stalkie_big_nohaplotig	exon	13262417	13262690	100	+	.	Parent=FBgn0032402.1.mrna1;Target=FBgn0032402.1 1079 1352 +
ChrX	stalkie_big_nohaplotig	exon	13264188	13264422	100	+	.	Parent=FBgn0032402.1.mrna1;Target=FBgn0032402.1 1353 1587 +
ChrX	stalkie_big_nohaplotig	CDS	13261272	13262349	.	+	0	Parent=FBgn0032402.1.mrna1;Target=FBgn0032402.1 1 1078 +
ChrX	stalkie_big_nohaplotig	CDS	13262417	13262690	.	+	2	Parent=FBgn0032402.1.mrna1;Target=FBgn0032402.1 1079 1352 +
ChrX	stalkie_big_nohaplotig	CDS	13264188	13264422	.	+	1	Parent=FBgn0032402.1.mrna1;Target=FBgn0032402.1 1353 1587 +
ChrX	gffcl	locus	13263304	13263514	.	-	.	ID=RLOC_00000734;geneIDs=comp137997_c0_seq1.path1;transcripts=comp137997_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13263304	13263514	.	-	.	ID=comp137997_c0_seq1.mrna1;geneID=comp137997_c0_seq1.path1;Name=comp137997_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=209;mismatches=2;indels=0;unknowns=0;Target=comp137997_c0_seq1 211 1 .;CDS_Target=comp137997_c0_seq1 191 3 .;locus=RLOC_00000734
ChrX	stalkie_big_nohaplotig	exon	13263304	13263514	99	-	.	Parent=comp137997_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13263324	13263512	.	-	0	Parent=comp137997_c0_seq1.mrna1
ChrX	gffcl	locus	13265627	13267235	.	+	.	ID=RLOC_00000735;geneIDs=FBgn0032401.1.path1;transcripts=FBgn0032401.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13265627	13267235	.	+	.	ID=FBgn0032401.1.mrna1;geneID=FBgn0032401.1.path1;Name=FBgn0032401.1;Dir=sensecoverage=100.0;identity=100.0;matches=1554;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000735
ChrX	stalkie_big_nohaplotig	exon	13265627	13266169	100	+	.	Parent=FBgn0032401.1.mrna1;Target=FBgn0032401.1 1 543 +
ChrX	stalkie_big_nohaplotig	exon	13266225	13267235	100	+	.	Parent=FBgn0032401.1.mrna1;Target=FBgn0032401.1 544 1554 +
ChrX	stalkie_big_nohaplotig	CDS	13265627	13266169	.	+	0	Parent=FBgn0032401.1.mrna1;Target=FBgn0032401.1 1 543 +
ChrX	stalkie_big_nohaplotig	CDS	13266225	13267235	.	+	0	Parent=FBgn0032401.1.mrna1;Target=FBgn0032401.1 544 1554 +
ChrX	gffcl	locus	13282452	13283985	.	-	.	ID=RLOC_00000737;geneIDs=comp147002_c0_seq1.path1;transcripts=comp147002_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13282452	13283985	.	-	.	ID=comp147002_c0_seq1.mrna1;geneID=comp147002_c0_seq1.path1;Name=comp147002_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.4;matches=1531;mismatches=3;indels=6;unknowns=0;Target=comp147002_c0_seq1 1558 19 .;CDS_Target=comp147002_c0_seq1 940 770 .;locus=RLOC_00000737
ChrX	stalkie_big_nohaplotig	exon	13282452	13283985	99	-	.	Parent=comp147002_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13283064	13283234	.	-	0	Parent=comp147002_c0_seq1.mrna1
ChrX	gffcl	locus	13295130	13297028	.	+	.	ID=RLOC_00000738;geneIDs=FBgn0032398.1.path1;transcripts=FBgn0032398.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13295130	13297028	.	+	.	ID=FBgn0032398.1.mrna1;geneID=FBgn0032398.1.path1;Name=FBgn0032398.1;Dir=sensecoverage=100.0;identity=99.9;matches=1654;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000738
ChrX	stalkie_big_nohaplotig	exon	13295130	13295330	100	+	.	Parent=FBgn0032398.1.mrna1;Target=FBgn0032398.1 1 201 +
ChrX	stalkie_big_nohaplotig	exon	13295389	13295503	98	+	.	Parent=FBgn0032398.1.mrna1;Target=FBgn0032398.1 202 316 +
ChrX	stalkie_big_nohaplotig	exon	13295562	13295684	100	+	.	Parent=FBgn0032398.1.mrna1;Target=FBgn0032398.1 317 439 +
ChrX	stalkie_big_nohaplotig	exon	13295753	13296429	100	+	.	Parent=FBgn0032398.1.mrna1;Target=FBgn0032398.1 440 1116 +
ChrX	stalkie_big_nohaplotig	exon	13296489	13297028	100	+	.	Parent=FBgn0032398.1.mrna1;Target=FBgn0032398.1 1117 1656 +
ChrX	stalkie_big_nohaplotig	CDS	13295130	13295330	.	+	0	Parent=FBgn0032398.1.mrna1;Target=FBgn0032398.1 1 201 +
ChrX	stalkie_big_nohaplotig	CDS	13295389	13295503	.	+	0	Parent=FBgn0032398.1.mrna1;Target=FBgn0032398.1 202 316 +
ChrX	stalkie_big_nohaplotig	CDS	13295562	13295684	.	+	2	Parent=FBgn0032398.1.mrna1;Target=FBgn0032398.1 317 439 +
ChrX	stalkie_big_nohaplotig	CDS	13295753	13296429	.	+	2	Parent=FBgn0032398.1.mrna1;Target=FBgn0032398.1 440 1116 +
ChrX	stalkie_big_nohaplotig	CDS	13296489	13297028	.	+	0	Parent=FBgn0032398.1.mrna1;Target=FBgn0032398.1 1117 1656 +
ChrX	gffcl	locus	13297285	13298266	.	-	.	ID=RLOC_00000739;geneIDs=FBgn0032446.1.path1;transcripts=FBgn0032446.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13297285	13298266	.	-	.	ID=FBgn0032446.1.mrna1;geneID=FBgn0032446.1.path1;Name=FBgn0032446.1;Dir=sensecoverage=100.0;identity=100.0;matches=744;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000739
ChrX	stalkie_big_nohaplotig	exon	13297285	13297552	100	-	.	Parent=FBgn0032446.1.mrna1;Target=FBgn0032446.1 477 744 +
ChrX	stalkie_big_nohaplotig	exon	13297625	13297753	100	-	.	Parent=FBgn0032446.1.mrna1;Target=FBgn0032446.1 348 476 +
ChrX	stalkie_big_nohaplotig	exon	13297811	13297834	100	-	.	Parent=FBgn0032446.1.mrna1;Target=FBgn0032446.1 324 347 +
ChrX	stalkie_big_nohaplotig	exon	13297890	13298137	100	-	.	Parent=FBgn0032446.1.mrna1;Target=FBgn0032446.1 76 323 +
ChrX	stalkie_big_nohaplotig	exon	13298192	13298266	100	-	.	Parent=FBgn0032446.1.mrna1;Target=FBgn0032446.1 1 75 +
ChrX	stalkie_big_nohaplotig	CDS	13297285	13297552	.	-	1	Parent=FBgn0032446.1.mrna1;Target=FBgn0032446.1 477 744 +
ChrX	stalkie_big_nohaplotig	CDS	13297625	13297753	.	-	1	Parent=FBgn0032446.1.mrna1;Target=FBgn0032446.1 348 476 +
ChrX	stalkie_big_nohaplotig	CDS	13297811	13297834	.	-	1	Parent=FBgn0032446.1.mrna1;Target=FBgn0032446.1 324 347 +
ChrX	stalkie_big_nohaplotig	CDS	13297890	13298137	.	-	0	Parent=FBgn0032446.1.mrna1;Target=FBgn0032446.1 76 323 +
ChrX	stalkie_big_nohaplotig	CDS	13298192	13298266	.	-	0	Parent=FBgn0032446.1.mrna1;Target=FBgn0032446.1 1 75 +
ChrX	gffcl	locus	13299572	13303611	.	+	.	ID=RLOC_00000740;geneIDs=FBgn0032447.1.path1;transcripts=FBgn0032447.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13299572	13303611	.	+	.	ID=FBgn0032447.1.mrna1;geneID=FBgn0032447.1.path1;Name=FBgn0032447.1;Dir=sensecoverage=100.0;identity=99.9;matches=1561;mismatches=1;indels=1;unknowns=0;Target=FBgn0032447.1 3 35 +;locus=RLOC_00000740
ChrX	stalkie_big_nohaplotig	exon	13299572	13299617	97	+	.	Parent=FBgn0032447.1.mrna1;Target=FBgn0032447.1 1 47 +
ChrX	stalkie_big_nohaplotig	exon	13302040	13302151	99	+	.	Parent=FBgn0032447.1.mrna1;Target=FBgn0032447.1 48 159 +
ChrX	stalkie_big_nohaplotig	exon	13302208	13303611	100	+	.	Parent=FBgn0032447.1.mrna1;Target=FBgn0032447.1 160 1563 +
ChrX	stalkie_big_nohaplotig	CDS	13299574	13299605	.	+	0	Parent=FBgn0032447.1.mrna1
ChrX	gffcl	locus	13301105	13301828	.	-	.	ID=RLOC_00000741;geneIDs=comp138358_c0_seq1.path1;transcripts=comp138358_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13301105	13301828	.	-	.	ID=comp138358_c0_seq1.mrna1;geneID=comp138358_c0_seq1.path1;Name=comp138358_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=723;mismatches=1;indels=0;unknowns=0;Target=comp138358_c0_seq1 724 1 .;CDS_Target=comp138358_c0_seq1 572 498 .;locus=RLOC_00000741
ChrX	stalkie_big_nohaplotig	exon	13301105	13301828	99	-	.	Parent=comp138358_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13301257	13301331	.	-	0	Parent=comp138358_c0_seq1.mrna1
ChrX	gffcl	locus	13305466	13308017	.	+	.	ID=RLOC_00000742;geneIDs=FBgn0032450.1.path1;transcripts=FBgn0032450.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13305466	13308017	.	+	.	ID=FBgn0032450.1.mrna1;geneID=FBgn0032450.1.path1;Name=FBgn0032450.1;Dir=sensecoverage=100.0;identity=99.8;matches=2433;mismatches=6;indels=0;unknowns=0;locus=RLOC_00000742
ChrX	stalkie_big_nohaplotig	exon	13305466	13305883	99	+	.	Parent=FBgn0032450.1.mrna1;Target=FBgn0032450.1 1 418 +
ChrX	stalkie_big_nohaplotig	exon	13305944	13306462	99	+	.	Parent=FBgn0032450.1.mrna1;Target=FBgn0032450.1 419 937 +
ChrX	stalkie_big_nohaplotig	exon	13306516	13308017	99	+	.	Parent=FBgn0032450.1.mrna1;Target=FBgn0032450.1 938 2439 +
ChrX	stalkie_big_nohaplotig	CDS	13305466	13305883	.	+	0	Parent=FBgn0032450.1.mrna1;Target=FBgn0032450.1 1 418 +
ChrX	stalkie_big_nohaplotig	CDS	13305944	13306462	.	+	2	Parent=FBgn0032450.1.mrna1;Target=FBgn0032450.1 419 937 +
ChrX	stalkie_big_nohaplotig	CDS	13306516	13308017	.	+	2	Parent=FBgn0032450.1.mrna1;Target=FBgn0032450.1 938 2439 +
ChrX	gffcl	locus	13308089	13321074	.	-	.	ID=RLOC_00000743;geneIDs=FBgn0032295.2.path1;transcripts=FBgn0032295.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13308089	13321074	.	-	.	ID=FBgn0032295.2.mrna1;geneID=FBgn0032295.2.path1;Name=FBgn0032295.2;Dir=sensecoverage=100.0;identity=99.8;matches=1449;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000743
ChrX	stalkie_big_nohaplotig	exon	13308089	13308419	99	-	.	Parent=FBgn0032295.2.mrna1;Target=FBgn0032295.2 1122 1452 +
ChrX	stalkie_big_nohaplotig	exon	13308485	13308583	100	-	.	Parent=FBgn0032295.2.mrna1;Target=FBgn0032295.2 1023 1121 +
ChrX	stalkie_big_nohaplotig	exon	13308682	13309073	99	-	.	Parent=FBgn0032295.2.mrna1;Target=FBgn0032295.2 631 1022 +
ChrX	stalkie_big_nohaplotig	exon	13320306	13320455	100	-	.	Parent=FBgn0032295.2.mrna1;Target=FBgn0032295.2 481 630 +
ChrX	stalkie_big_nohaplotig	exon	13320521	13320833	100	-	.	Parent=FBgn0032295.2.mrna1;Target=FBgn0032295.2 168 480 +
ChrX	stalkie_big_nohaplotig	exon	13320908	13321074	99	-	.	Parent=FBgn0032295.2.mrna1;Target=FBgn0032295.2 1 167 +
ChrX	stalkie_big_nohaplotig	CDS	13308089	13308419	.	-	1	Parent=FBgn0032295.2.mrna1;Target=FBgn0032295.2 1122 1452 +
ChrX	stalkie_big_nohaplotig	CDS	13308485	13308583	.	-	1	Parent=FBgn0032295.2.mrna1;Target=FBgn0032295.2 1023 1121 +
ChrX	stalkie_big_nohaplotig	CDS	13308682	13309073	.	-	0	Parent=FBgn0032295.2.mrna1;Target=FBgn0032295.2 631 1022 +
ChrX	stalkie_big_nohaplotig	CDS	13320306	13320455	.	-	0	Parent=FBgn0032295.2.mrna1;Target=FBgn0032295.2 481 630 +
ChrX	stalkie_big_nohaplotig	CDS	13320521	13320833	.	-	1	Parent=FBgn0032295.2.mrna1;Target=FBgn0032295.2 168 480 +
ChrX	stalkie_big_nohaplotig	CDS	13320908	13321074	.	-	0	Parent=FBgn0032295.2.mrna1;Target=FBgn0032295.2 1 167 +
ChrX	gffcl	locus	13314970	13318835	.	+	.	ID=RLOC_00000744;geneIDs=FBgn0032449.1.path1;transcripts=FBgn0032449.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13314970	13318835	.	+	.	ID=FBgn0032449.1.mrna1;geneID=FBgn0032449.1.path1;Name=FBgn0032449.1;Dir=sensecoverage=100.0;identity=99.9;matches=1387;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000744
ChrX	stalkie_big_nohaplotig	exon	13314970	13315636	99	+	.	Parent=FBgn0032449.1.mrna1;Target=FBgn0032449.1 1 667 +
ChrX	stalkie_big_nohaplotig	exon	13318114	13318835	99	+	.	Parent=FBgn0032449.1.mrna1;Target=FBgn0032449.1 668 1389 +
ChrX	stalkie_big_nohaplotig	CDS	13314970	13315636	.	+	0	Parent=FBgn0032449.1.mrna1;Target=FBgn0032449.1 1 667 +
ChrX	stalkie_big_nohaplotig	CDS	13318114	13318835	.	+	2	Parent=FBgn0032449.1.mrna1;Target=FBgn0032449.1 668 1389 +
ChrX	gffcl	locus	13321922	13323190	.	+	.	ID=RLOC_00000745;geneIDs=FBgn0032451.1.path1;transcripts=FBgn0032451.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13321922	13323190	.	+	.	ID=FBgn0032451.1.mrna1;geneID=FBgn0032451.1.path1;Name=FBgn0032451.1;Dir=sensecoverage=100.0;identity=99.9;matches=1211;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000745
ChrX	stalkie_big_nohaplotig	exon	13321922	13322282	100	+	.	Parent=FBgn0032451.1.mrna1;Target=FBgn0032451.1 1 361 +
ChrX	stalkie_big_nohaplotig	exon	13322340	13323190	99	+	.	Parent=FBgn0032451.1.mrna1;Target=FBgn0032451.1 362 1212 +
ChrX	stalkie_big_nohaplotig	CDS	13321922	13322282	.	+	0	Parent=FBgn0032451.1.mrna1;Target=FBgn0032451.1 1 361 +
ChrX	stalkie_big_nohaplotig	CDS	13322340	13323190	.	+	2	Parent=FBgn0032451.1.mrna1;Target=FBgn0032451.1 362 1212 +
ChrX	gffcl	locus	13324261	13325343	.	-	.	ID=RLOC_00000746;geneIDs=comp145407_c0_seq1.path1;transcripts=comp145407_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13324261	13325343	.	-	.	ID=comp145407_c0_seq1.mrna1;geneID=comp145407_c0_seq1.path1;Name=comp145407_c0_seq1;Dir=sensecoverage=99.9;identity=99.5;matches=801;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000746
ChrX	stalkie_big_nohaplotig	exon	13324261	13324430	100	-	.	Parent=comp145407_c0_seq1.mrna1;Target=comp145407_c0_seq1 637 806 +
ChrX	stalkie_big_nohaplotig	exon	13324523	13324698	100	-	.	Parent=comp145407_c0_seq1.mrna1;Target=comp145407_c0_seq1 461 636 +
ChrX	stalkie_big_nohaplotig	exon	13324755	13324899	100	-	.	Parent=comp145407_c0_seq1.mrna1;Target=comp145407_c0_seq1 316 460 +
ChrX	stalkie_big_nohaplotig	exon	13324971	13325125	100	-	.	Parent=comp145407_c0_seq1.mrna1;Target=comp145407_c0_seq1 161 315 +
ChrX	stalkie_big_nohaplotig	exon	13325185	13325343	97	-	.	Parent=comp145407_c0_seq1.mrna1;Target=comp145407_c0_seq1 2 160 +
ChrX	stalkie_big_nohaplotig	CDS	13324277	13324430	.	-	1	Parent=comp145407_c0_seq1.mrna1;Target=comp145407_c0_seq1 637 790 +
ChrX	stalkie_big_nohaplotig	CDS	13324523	13324698	.	-	0	Parent=comp145407_c0_seq1.mrna1;Target=comp145407_c0_seq1 461 636 +
ChrX	stalkie_big_nohaplotig	CDS	13324755	13324899	.	-	1	Parent=comp145407_c0_seq1.mrna1;Target=comp145407_c0_seq1 316 460 +
ChrX	stalkie_big_nohaplotig	CDS	13324971	13325125	.	-	0	Parent=comp145407_c0_seq1.mrna1;Target=comp145407_c0_seq1 161 315 +
ChrX	stalkie_big_nohaplotig	CDS	13325185	13325247	.	-	0	Parent=comp145407_c0_seq1.mrna1;Target=comp145407_c0_seq1 98 160 +
ChrX	gffcl	locus	13327398	13328246	.	.	.	ID=RLOC_00000747;geneIDs=FBgn0032453.1.path2,comp134711_c0_seq1.path1;transcripts=FBgn0032453.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	13327398	13328066	.	-	.	ID=FBgn0032453.1.mrna2;geneID=FBgn0032453.1.path2;Name=FBgn0032453.1;Dir=indeterminatecoverage=41.2;identity=99.4;matches=665;mismatches=4;indels=0;unknowns=0;Target=FBgn0032453.1 1623 955 .;locus=RLOC_00000747
ChrX	stalkie_big_nohaplotig	exon	13327398	13328066	99	-	.	Parent=FBgn0032453.1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	13327398	13328066	.	-	0	Parent=FBgn0032453.1.mrna2
ChrX	gffcl	locus	13331439	13360643	.	-	.	ID=RLOC_00000748;geneIDs=FBgn0032455.1.path1;transcripts=FBgn0032455.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13331439	13360643	.	-	.	ID=FBgn0032455.1.mrna1;geneID=FBgn0032455.1.path1;Name=FBgn0032455.1;Dir=sensecoverage=100.0;identity=99.7;matches=1023;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000748
ChrX	stalkie_big_nohaplotig	exon	13331439	13331501	100	-	.	Parent=FBgn0032455.1.mrna1;Target=FBgn0032455.1 964 1026 +
ChrX	stalkie_big_nohaplotig	exon	13331566	13331709	98	-	.	Parent=FBgn0032455.1.mrna1;Target=FBgn0032455.1 820 963 +
ChrX	stalkie_big_nohaplotig	exon	13331768	13332399	99	-	.	Parent=FBgn0032455.1.mrna1;Target=FBgn0032455.1 188 819 +
ChrX	stalkie_big_nohaplotig	exon	13360402	13360507	100	-	.	Parent=FBgn0032455.1.mrna1;Target=FBgn0032455.1 82 187 +
ChrX	stalkie_big_nohaplotig	exon	13360563	13360643	100	-	.	Parent=FBgn0032455.1.mrna1;Target=FBgn0032455.1 1 81 +
ChrX	stalkie_big_nohaplotig	CDS	13331439	13331501	.	-	0	Parent=FBgn0032455.1.mrna1;Target=FBgn0032455.1 964 1026 +
ChrX	stalkie_big_nohaplotig	CDS	13331566	13331709	.	-	0	Parent=FBgn0032455.1.mrna1;Target=FBgn0032455.1 820 963 +
ChrX	stalkie_big_nohaplotig	CDS	13331768	13332399	.	-	2	Parent=FBgn0032455.1.mrna1;Target=FBgn0032455.1 188 819 +
ChrX	stalkie_big_nohaplotig	CDS	13360402	13360507	.	-	0	Parent=FBgn0032455.1.mrna1;Target=FBgn0032455.1 82 187 +
ChrX	stalkie_big_nohaplotig	CDS	13360563	13360643	.	-	0	Parent=FBgn0032455.1.mrna1;Target=FBgn0032455.1 1 81 +
ChrX	gffcl	locus	13346976	13347439	.	.	.	ID=RLOC_00000749;geneIDs=comp135551_c0_seq1.path1,comp146464_c0_seq1.path1;transcripts=comp146464_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13347174	13347439	.	-	.	ID=comp146464_c0_seq1.mrna1;geneID=comp146464_c0_seq1.path1;Name=comp146464_c0_seq1;Dir=indeterminatecoverage=90.8;identity=98.5;matches=262;mismatches=4;indels=0;unknowns=0;Target=comp146464_c0_seq1 279 14 .;CDS_Target=comp146464_c0_seq1 148 14 .;locus=RLOC_00000749
ChrX	stalkie_big_nohaplotig	exon	13347174	13347439	98	-	.	Parent=comp146464_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13347305	13347439	.	-	0	Parent=comp146464_c0_seq1.mrna1
ChrX	gffcl	locus	13352126	13352656	.	+	.	ID=RLOC_00000750;geneIDs=comp139670_c0_seq1.path1;transcripts=comp139670_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13352126	13352656	.	+	.	ID=comp139670_c0_seq1.mrna1;geneID=comp139670_c0_seq1.path1;Name=comp139670_c0_seq1;Dir=indeterminatecoverage=96.6;identity=97.0;matches=515;mismatches=4;indels=12;unknowns=0;Target=comp139670_c0_seq1 537 19 .;CDS_Target=comp139670_c0_seq1 212 162 .;locus=RLOC_00000750
ChrX	stalkie_big_nohaplotig	exon	13352126	13352656	96	+	.	Parent=comp139670_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13352269	13352331	.	+	0	Parent=comp139670_c0_seq1.mrna1
ChrX	gffcl	locus	13352895	13353425	.	+	.	ID=RLOC_00000751;geneIDs=comp917179_c0_seq1.path1;transcripts=comp917179_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13352895	13353425	.	+	.	ID=comp917179_c0_seq1.mrna1;geneID=comp917179_c0_seq1.path1;Name=comp917179_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=526;mismatches=2;indels=3;unknowns=0;Target=comp917179_c0_seq1 528 1 .;CDS_Target=comp917179_c0_seq1 486 349 .;locus=RLOC_00000751
ChrX	stalkie_big_nohaplotig	exon	13352895	13353425	99	+	.	Parent=comp917179_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13353246	13353383	.	+	0	Parent=comp917179_c0_seq1.mrna1
ChrX	gffcl	locus	13361756	13387645	.	.	.	ID=RLOC_00000752;geneIDs=FBgn0032456.1.path1,comp151254_c0_seq1.path1,comp161228_c3_seq1.path1;transcripts=comp161228_c3_seq1.mrna1,FBgn0032456.1.mrna1,comp151254_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13361756	13380701	.	+	.	ID=comp161228_c3_seq1.mrna1;geneID=comp161228_c3_seq1.path1;Name=comp161228_c3_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=4129;mismatches=6;indels=1;unknowns=0;locus=RLOC_00000752
ChrX	stalkie_big_nohaplotig	exon	13361756	13362054	100	+	.	Parent=comp161228_c3_seq1.mrna1;Target=comp161228_c3_seq1 1 299 +
ChrX	stalkie_big_nohaplotig	exon	13362122	13362268	100	+	.	Parent=comp161228_c3_seq1.mrna1;Target=comp161228_c3_seq1 300 446 +
ChrX	stalkie_big_nohaplotig	exon	13362338	13362643	99	+	.	Parent=comp161228_c3_seq1.mrna1;Target=comp161228_c3_seq1 447 752 +
ChrX	stalkie_big_nohaplotig	exon	13362700	13362978	99	+	.	Parent=comp161228_c3_seq1.mrna1;Target=comp161228_c3_seq1 753 1032 +
ChrX	stalkie_big_nohaplotig	exon	13363033	13364085	99	+	.	Parent=comp161228_c3_seq1.mrna1;Target=comp161228_c3_seq1 1033 2085 +
ChrX	stalkie_big_nohaplotig	exon	13364689	13364835	99	+	.	Parent=comp161228_c3_seq1.mrna1;Target=comp161228_c3_seq1 2086 2232 +
ChrX	stalkie_big_nohaplotig	exon	13366021	13366105	100	+	.	Parent=comp161228_c3_seq1.mrna1;Target=comp161228_c3_seq1 2233 2317 +
ChrX	stalkie_big_nohaplotig	exon	13366169	13366991	100	+	.	Parent=comp161228_c3_seq1.mrna1;Target=comp161228_c3_seq1 2318 3140 +
ChrX	stalkie_big_nohaplotig	exon	13367052	13367211	100	+	.	Parent=comp161228_c3_seq1.mrna1;Target=comp161228_c3_seq1 3141 3300 +
ChrX	stalkie_big_nohaplotig	exon	13367273	13367480	100	+	.	Parent=comp161228_c3_seq1.mrna1;Target=comp161228_c3_seq1 3301 3508 +
ChrX	stalkie_big_nohaplotig	exon	13380074	13380701	99	+	.	Parent=comp161228_c3_seq1.mrna1;Target=comp161228_c3_seq1 3509 4136 +
ChrX	stalkie_big_nohaplotig	CDS	13362215	13362268	.	+	0	Parent=comp161228_c3_seq1.mrna1;Target=comp161228_c3_seq1 393 446 +
ChrX	stalkie_big_nohaplotig	CDS	13362338	13362643	.	+	0	Parent=comp161228_c3_seq1.mrna1;Target=comp161228_c3_seq1 447 752 +
ChrX	stalkie_big_nohaplotig	CDS	13362700	13362845	.	+	0	Parent=comp161228_c3_seq1.mrna1;Target=comp161228_c3_seq1 753 899 +
ChrX	stalkie_big_nohaplotig	mRNA	13362788	13387645	.	+	.	ID=FBgn0032456.1.mrna1;geneID=FBgn0032456.1.path1;Name=FBgn0032456.1;Dir=sensecoverage=100.0;identity=99.9;matches=4202;mismatches=3;indels=1;unknowns=0;Target=FBgn0032456.1 3 59 +;locus=RLOC_00000752
ChrX	stalkie_big_nohaplotig	exon	13362788	13362978	98	+	.	Parent=FBgn0032456.1.mrna1;Target=FBgn0032456.1 1 192 +
ChrX	stalkie_big_nohaplotig	exon	13363033	13364085	99	+	.	Parent=FBgn0032456.1.mrna1;Target=FBgn0032456.1 193 1245 +
ChrX	stalkie_big_nohaplotig	exon	13364689	13364835	99	+	.	Parent=FBgn0032456.1.mrna1;Target=FBgn0032456.1 1246 1392 +
ChrX	stalkie_big_nohaplotig	exon	13366021	13366105	100	+	.	Parent=FBgn0032456.1.mrna1;Target=FBgn0032456.1 1393 1477 +
ChrX	stalkie_big_nohaplotig	exon	13366169	13366991	100	+	.	Parent=FBgn0032456.1.mrna1;Target=FBgn0032456.1 1478 2300 +
ChrX	stalkie_big_nohaplotig	exon	13367052	13367211	100	+	.	Parent=FBgn0032456.1.mrna1;Target=FBgn0032456.1 2301 2460 +
ChrX	stalkie_big_nohaplotig	exon	13367273	13367480	100	+	.	Parent=FBgn0032456.1.mrna1;Target=FBgn0032456.1 2461 2668 +
ChrX	stalkie_big_nohaplotig	exon	13374322	13374542	100	+	.	Parent=FBgn0032456.1.mrna1;Target=FBgn0032456.1 2669 2889 +
ChrX	stalkie_big_nohaplotig	exon	13384710	13384927	100	+	.	Parent=FBgn0032456.1.mrna1;Target=FBgn0032456.1 2890 3107 +
ChrX	stalkie_big_nohaplotig	exon	13385005	13385508	100	+	.	Parent=FBgn0032456.1.mrna1;Target=FBgn0032456.1 3108 3611 +
ChrX	stalkie_big_nohaplotig	exon	13385581	13385962	100	+	.	Parent=FBgn0032456.1.mrna1;Target=FBgn0032456.1 3612 3993 +
ChrX	stalkie_big_nohaplotig	exon	13386774	13386961	100	+	.	Parent=FBgn0032456.1.mrna1;Target=FBgn0032456.1 3994 4181 +
ChrX	stalkie_big_nohaplotig	exon	13387621	13387645	100	+	.	Parent=FBgn0032456.1.mrna1;Target=FBgn0032456.1 4182 4206 +
ChrX	stalkie_big_nohaplotig	CDS	13362790	13362845	.	+	0	Parent=FBgn0032456.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13364064	13364710	.	-	.	ID=comp151254_c0_seq1.mrna1;geneID=comp151254_c0_seq1.path1;Name=comp151254_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=644;mismatches=3;indels=0;unknowns=0;Target=comp151254_c0_seq1 647 1 .;CDS_Target=comp151254_c0_seq1 544 440 .;locus=RLOC_00000752
ChrX	stalkie_big_nohaplotig	exon	13364064	13364710	99	-	.	Parent=comp151254_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13364167	13364271	.	-	0	Parent=comp151254_c0_seq1.mrna1
ChrX	gffcl	locus	13377714	13379434	.	+	.	ID=RLOC_00000753;geneIDs=comp159674_c0_seq1.path1;transcripts=comp159674_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13377714	13379434	.	+	.	ID=comp159674_c0_seq1.mrna1;geneID=comp159674_c0_seq1.path1;Name=comp159674_c0_seq1;Dir=indeterminatecoverage=95.7;identity=96.3;matches=1696;mismatches=25;indels=41;unknowns=0;Target=comp159674_c0_seq1 1765 4 .;CDS_Target=comp159674_c0_seq1 1765 1526 .;locus=RLOC_00000753
ChrX	stalkie_big_nohaplotig	exon	13377714	13379434	96	+	.	Parent=comp159674_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13379201	13379434	.	+	0	Parent=comp159674_c0_seq1.mrna1
ChrX	gffcl	locus	13383036	13384446	.	+	.	ID=RLOC_00000754;geneIDs=comp158426_c0_seq1.path1;transcripts=comp158426_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13383036	13384446	.	+	.	ID=comp158426_c0_seq1.mrna1;geneID=comp158426_c0_seq1.path1;Name=comp158426_c0_seq1;Dir=indeterminatecoverage=97.3;identity=99.4;matches=1403;mismatches=8;indels=0;unknowns=0;Target=comp158426_c0_seq1 1419 9 .;CDS_Target=comp158426_c0_seq1 1262 1107 .;locus=RLOC_00000754
ChrX	stalkie_big_nohaplotig	exon	13383036	13384446	99	+	.	Parent=comp158426_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13384134	13384289	.	+	0	Parent=comp158426_c0_seq1.mrna1
ChrX	gffcl	locus	13400724	13401929	.	+	.	ID=RLOC_00000756;geneIDs=FBgn0003961.2.path1;transcripts=FBgn0003961.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13400724	13401929	.	+	.	ID=FBgn0003961.2.mrna1;geneID=FBgn0003961.2.path1;Name=FBgn0003961.2;Dir=sensecoverage=100.0;identity=100.0;matches=1014;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000756
ChrX	stalkie_big_nohaplotig	exon	13400724	13400970	100	+	.	Parent=FBgn0003961.2.mrna1;Target=FBgn0003961.2 1 247 +
ChrX	stalkie_big_nohaplotig	exon	13401034	13401321	100	+	.	Parent=FBgn0003961.2.mrna1;Target=FBgn0003961.2 248 535 +
ChrX	stalkie_big_nohaplotig	exon	13401385	13401698	100	+	.	Parent=FBgn0003961.2.mrna1;Target=FBgn0003961.2 536 849 +
ChrX	stalkie_big_nohaplotig	exon	13401765	13401929	100	+	.	Parent=FBgn0003961.2.mrna1;Target=FBgn0003961.2 850 1014 +
ChrX	stalkie_big_nohaplotig	CDS	13400724	13400970	.	+	0	Parent=FBgn0003961.2.mrna1;Target=FBgn0003961.2 1 247 +
ChrX	stalkie_big_nohaplotig	CDS	13401034	13401321	.	+	2	Parent=FBgn0003961.2.mrna1;Target=FBgn0003961.2 248 535 +
ChrX	stalkie_big_nohaplotig	CDS	13401385	13401698	.	+	2	Parent=FBgn0003961.2.mrna1;Target=FBgn0003961.2 536 849 +
ChrX	stalkie_big_nohaplotig	CDS	13401765	13401929	.	+	0	Parent=FBgn0003961.2.mrna1;Target=FBgn0003961.2 850 1014 +
ChrX	gffcl	locus	13405359	13411298	.	+	.	ID=RLOC_00000757;geneIDs=FBgn0005390.1.path1;transcripts=FBgn0005390.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13405359	13411298	.	+	.	ID=FBgn0005390.1.mrna1;geneID=FBgn0005390.1.path1;Name=FBgn0005390.1;Dir=sensecoverage=100.0;identity=99.5;matches=4536;mismatches=20;indels=1;unknowns=0;locus=RLOC_00000757
ChrX	stalkie_big_nohaplotig	exon	13405359	13405472	100	+	.	Parent=FBgn0005390.1.mrna1;Target=FBgn0005390.1 1 114 +
ChrX	stalkie_big_nohaplotig	exon	13405543	13405872	99	+	.	Parent=FBgn0005390.1.mrna1;Target=FBgn0005390.1 115 444 +
ChrX	stalkie_big_nohaplotig	exon	13405936	13406201	99	+	.	Parent=FBgn0005390.1.mrna1;Target=FBgn0005390.1 445 710 +
ChrX	stalkie_big_nohaplotig	exon	13406267	13406399	99	+	.	Parent=FBgn0005390.1.mrna1;Target=FBgn0005390.1 711 843 +
ChrX	stalkie_big_nohaplotig	exon	13406466	13406952	99	+	.	Parent=FBgn0005390.1.mrna1;Target=FBgn0005390.1 844 1330 +
ChrX	stalkie_big_nohaplotig	exon	13407017	13407400	99	+	.	Parent=FBgn0005390.1.mrna1;Target=FBgn0005390.1 1331 1714 +
ChrX	stalkie_big_nohaplotig	exon	13407865	13408329	99	+	.	Parent=FBgn0005390.1.mrna1;Target=FBgn0005390.1 1715 2179 +
ChrX	stalkie_big_nohaplotig	exon	13408386	13408627	100	+	.	Parent=FBgn0005390.1.mrna1;Target=FBgn0005390.1 2180 2421 +
ChrX	stalkie_big_nohaplotig	exon	13409164	13411298	99	+	.	Parent=FBgn0005390.1.mrna1;Target=FBgn0005390.1 2422 4557 +
ChrX	stalkie_big_nohaplotig	CDS	13405359	13405472	.	+	0	Parent=FBgn0005390.1.mrna1;Target=FBgn0005390.1 1 114 +
ChrX	stalkie_big_nohaplotig	CDS	13405543	13405872	.	+	0	Parent=FBgn0005390.1.mrna1;Target=FBgn0005390.1 115 444 +
ChrX	stalkie_big_nohaplotig	CDS	13405936	13406201	.	+	0	Parent=FBgn0005390.1.mrna1;Target=FBgn0005390.1 445 710 +
ChrX	stalkie_big_nohaplotig	CDS	13406267	13406399	.	+	1	Parent=FBgn0005390.1.mrna1;Target=FBgn0005390.1 711 843 +
ChrX	stalkie_big_nohaplotig	CDS	13406466	13406952	.	+	0	Parent=FBgn0005390.1.mrna1;Target=FBgn0005390.1 844 1330 +
ChrX	stalkie_big_nohaplotig	CDS	13407017	13407400	.	+	2	Parent=FBgn0005390.1.mrna1;Target=FBgn0005390.1 1331 1714 +
ChrX	stalkie_big_nohaplotig	CDS	13407865	13408329	.	+	2	Parent=FBgn0005390.1.mrna1;Target=FBgn0005390.1 1715 2179 +
ChrX	stalkie_big_nohaplotig	CDS	13408386	13408627	.	+	2	Parent=FBgn0005390.1.mrna1;Target=FBgn0005390.1 2180 2421 +
ChrX	stalkie_big_nohaplotig	CDS	13409164	13411298	.	+	0	Parent=FBgn0005390.1.mrna1;Target=FBgn0005390.1 2422 4557 +
ChrX	gffcl	locus	13414457	13415732	.	-	.	ID=RLOC_00000758;geneIDs=FBgn0003961.1.path1;transcripts=FBgn0003961.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13414457	13415732	.	-	.	ID=FBgn0003961.1.mrna1;geneID=FBgn0003961.1.path1;Name=FBgn0003961.1;Dir=sensecoverage=100.0;identity=99.7;matches=1113;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000758
ChrX	stalkie_big_nohaplotig	exon	13414457	13414938	100	-	.	Parent=FBgn0003961.1.mrna1;Target=FBgn0003961.1 635 1116 +
ChrX	stalkie_big_nohaplotig	exon	13415019	13415345	99	-	.	Parent=FBgn0003961.1.mrna1;Target=FBgn0003961.1 308 634 +
ChrX	stalkie_big_nohaplotig	exon	13415426	13415732	100	-	.	Parent=FBgn0003961.1.mrna1;Target=FBgn0003961.1 1 307 +
ChrX	stalkie_big_nohaplotig	CDS	13414457	13414938	.	-	2	Parent=FBgn0003961.1.mrna1;Target=FBgn0003961.1 635 1116 +
ChrX	stalkie_big_nohaplotig	CDS	13415019	13415345	.	-	2	Parent=FBgn0003961.1.mrna1;Target=FBgn0003961.1 308 634 +
ChrX	stalkie_big_nohaplotig	CDS	13415426	13415732	.	-	0	Parent=FBgn0003961.1.mrna1;Target=FBgn0003961.1 1 307 +
ChrX	gffcl	locus	13433117	13442556	.	-	.	ID=RLOC_00000759;geneIDs=FBgn0031945.1.path1;transcripts=FBgn0031945.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13433117	13442556	.	-	.	ID=FBgn0031945.1.mrna1;geneID=FBgn0031945.1.path1;Name=FBgn0031945.1;Dir=sensecoverage=100.0;identity=99.8;matches=799;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000759
ChrX	stalkie_big_nohaplotig	exon	13433117	13433285	100	-	.	Parent=FBgn0031945.1.mrna1;Target=FBgn0031945.1 633 801 +
ChrX	stalkie_big_nohaplotig	exon	13434234	13434385	100	-	.	Parent=FBgn0031945.1.mrna1;Target=FBgn0031945.1 481 632 +
ChrX	stalkie_big_nohaplotig	exon	13434493	13434695	99	-	.	Parent=FBgn0031945.1.mrna1;Target=FBgn0031945.1 278 480 +
ChrX	stalkie_big_nohaplotig	exon	13442280	13442556	99	-	.	Parent=FBgn0031945.1.mrna1;Target=FBgn0031945.1 1 277 +
ChrX	stalkie_big_nohaplotig	CDS	13433117	13433285	.	-	1	Parent=FBgn0031945.1.mrna1;Target=FBgn0031945.1 633 801 +
ChrX	stalkie_big_nohaplotig	CDS	13434234	13434385	.	-	0	Parent=FBgn0031945.1.mrna1;Target=FBgn0031945.1 481 632 +
ChrX	stalkie_big_nohaplotig	CDS	13434493	13434695	.	-	2	Parent=FBgn0031945.1.mrna1;Target=FBgn0031945.1 278 480 +
ChrX	stalkie_big_nohaplotig	CDS	13442280	13442556	.	-	0	Parent=FBgn0031945.1.mrna1;Target=FBgn0031945.1 1 277 +
ChrX	gffcl	locus	13487631	14757368	.	-	.	ID=RLOC_00000761;geneIDs=comp161974_c0_seq1.path1;transcripts=comp161974_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13487631	14757368	.	-	.	ID=comp161974_c0_seq1.mrna1;geneID=comp161974_c0_seq1.path1;Name=comp161974_c0_seq1;Dir=indeterminatecoverage=69.7;identity=99.1;matches=522;mismatches=0;indels=5;unknowns=0;Target=comp161974_c0_seq1 418 320 .;locus=RLOC_00000761
ChrX	stalkie_big_nohaplotig	exon	13487631	13487641	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 691 681 .
ChrX	stalkie_big_nohaplotig	exon	13495002	13495003	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 680 679 .
ChrX	stalkie_big_nohaplotig	exon	13506941	13506944	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 678 675 .
ChrX	stalkie_big_nohaplotig	exon	13508932	13508951	75	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 674 660 .
ChrX	stalkie_big_nohaplotig	exon	13508956	13508970	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 636 622 .
ChrX	stalkie_big_nohaplotig	exon	13530258	13530259	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 620 619 .
ChrX	stalkie_big_nohaplotig	exon	13545007	13545009	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 618 616 .
ChrX	stalkie_big_nohaplotig	exon	13547692	13547698	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 615 609 .
ChrX	stalkie_big_nohaplotig	exon	13547786	13547790	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 608 604 .
ChrX	stalkie_big_nohaplotig	exon	13550873	13550878	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 603 598 .
ChrX	stalkie_big_nohaplotig	exon	13558067	13558072	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 597 592 .
ChrX	stalkie_big_nohaplotig	exon	13558077	13558084	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 579 572 .
ChrX	stalkie_big_nohaplotig	exon	13558520	13558528	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 571 563 .
ChrX	stalkie_big_nohaplotig	exon	13562405	13562417	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 558 546 .
ChrX	stalkie_big_nohaplotig	exon	13574175	13574179	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 545 541 .
ChrX	stalkie_big_nohaplotig	exon	13578699	13578705	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 540 534 .
ChrX	stalkie_big_nohaplotig	exon	13579110	13579112	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 533 531 .
ChrX	stalkie_big_nohaplotig	exon	13597810	13597813	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 529 526 .
ChrX	stalkie_big_nohaplotig	exon	13612080	13612081	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 525 524 .
ChrX	stalkie_big_nohaplotig	exon	13614997	13615004	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 523 516 .
ChrX	stalkie_big_nohaplotig	exon	13620275	13620278	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 515 512 .
ChrX	stalkie_big_nohaplotig	exon	13626010	13626014	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 511 507 .
ChrX	stalkie_big_nohaplotig	exon	13640452	13640458	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 506 500 .
ChrX	stalkie_big_nohaplotig	exon	13645323	13645330	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 499 492 .
ChrX	stalkie_big_nohaplotig	exon	13652072	13652080	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 491 483 .
ChrX	stalkie_big_nohaplotig	exon	13655510	13655514	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 482 478 .
ChrX	stalkie_big_nohaplotig	exon	14757022	14757368	100	-	.	Parent=comp161974_c0_seq1.mrna1;Target=comp161974_c0_seq1 477 131 .
ChrX	stalkie_big_nohaplotig	CDS	14757081	14757179	.	-	0	Parent=comp161974_c0_seq1.mrna1
ChrX	gffcl	locus	13498524	13567017	.	-	.	ID=RLOC_00000762;geneIDs=comp125063_c0_seq1.path1;transcripts=comp125063_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13498524	13567017	.	-	.	ID=comp125063_c0_seq1.mrna1;geneID=comp125063_c0_seq1.path1;Name=comp125063_c0_seq1;Dir=indeterminatecoverage=68.0;identity=99.4;matches=338;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000762
ChrX	stalkie_big_nohaplotig	exon	13498524	13498536	84	-	.	Parent=comp125063_c0_seq1.mrna1;Target=comp125063_c0_seq1 363 351 .
ChrX	stalkie_big_nohaplotig	exon	13503864	13503867	100	-	.	Parent=comp125063_c0_seq1.mrna1;Target=comp125063_c0_seq1 350 347 .
ChrX	stalkie_big_nohaplotig	exon	13506677	13506683	100	-	.	Parent=comp125063_c0_seq1.mrna1;Target=comp125063_c0_seq1 346 340 .
ChrX	stalkie_big_nohaplotig	exon	13510425	13510429	100	-	.	Parent=comp125063_c0_seq1.mrna1;Target=comp125063_c0_seq1 339 335 .
ChrX	stalkie_big_nohaplotig	exon	13525271	13525275	100	-	.	Parent=comp125063_c0_seq1.mrna1;Target=comp125063_c0_seq1 334 330 .
ChrX	stalkie_big_nohaplotig	exon	13546223	13546227	100	-	.	Parent=comp125063_c0_seq1.mrna1;Target=comp125063_c0_seq1 329 325 .
ChrX	stalkie_big_nohaplotig	exon	13559293	13559295	100	-	.	Parent=comp125063_c0_seq1.mrna1;Target=comp125063_c0_seq1 324 322 .
ChrX	stalkie_big_nohaplotig	exon	13566720	13567017	100	-	.	Parent=comp125063_c0_seq1.mrna1;Target=comp125063_c0_seq1 321 24 .
ChrX	stalkie_big_nohaplotig	CDS	13498524	13498536	.	-	2	Parent=comp125063_c0_seq1.mrna1;Target=comp125063_c0_seq1 363 351 .
ChrX	stalkie_big_nohaplotig	CDS	13503864	13503867	.	-	0	Parent=comp125063_c0_seq1.mrna1;Target=comp125063_c0_seq1 350 347 .
ChrX	stalkie_big_nohaplotig	CDS	13506677	13506683	.	-	1	Parent=comp125063_c0_seq1.mrna1;Target=comp125063_c0_seq1 346 340 .
ChrX	stalkie_big_nohaplotig	CDS	13510425	13510429	.	-	0	Parent=comp125063_c0_seq1.mrna1;Target=comp125063_c0_seq1 339 335 .
ChrX	stalkie_big_nohaplotig	CDS	13525271	13525275	.	-	2	Parent=comp125063_c0_seq1.mrna1;Target=comp125063_c0_seq1 334 330 .
ChrX	stalkie_big_nohaplotig	CDS	13546223	13546227	.	-	1	Parent=comp125063_c0_seq1.mrna1;Target=comp125063_c0_seq1 329 325 .
ChrX	stalkie_big_nohaplotig	CDS	13559293	13559295	.	-	1	Parent=comp125063_c0_seq1.mrna1;Target=comp125063_c0_seq1 324 322 .
ChrX	stalkie_big_nohaplotig	CDS	13566720	13566886	.	-	0	Parent=comp125063_c0_seq1.mrna1;Target=comp125063_c0_seq1 321 155 .
ChrX	gffcl	locus	13498716	13498985	.	+	.	ID=RLOC_00000763;geneIDs=comp58359_c0_seq1.path1;transcripts=comp58359_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13498716	13498985	.	+	.	ID=comp58359_c0_seq1.mrna1;geneID=comp58359_c0_seq1.path1;Name=comp58359_c0_seq1;Dir=indeterminatecoverage=83.1;identity=100.0;matches=270;mismatches=0;indels=0;unknowns=0;Target=comp58359_c0_seq1 270 1 .;CDS_Target=comp58359_c0_seq1 215 3 .;locus=RLOC_00000763
ChrX	stalkie_big_nohaplotig	exon	13498716	13498985	100	+	.	Parent=comp58359_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13498718	13498930	.	+	0	Parent=comp58359_c0_seq1.mrna1
ChrX	gffcl	locus	13524286	13525135	.	+	.	ID=RLOC_00000764;geneIDs=comp148947_c0_seq1.path1;transcripts=comp148947_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13524286	13525135	.	+	.	ID=comp148947_c0_seq1.mrna1;geneID=comp148947_c0_seq1.path1;Name=comp148947_c0_seq1;Dir=sensecoverage=99.6;identity=98.6;matches=718;mismatches=10;indels=0;unknowns=0;locus=RLOC_00000764
ChrX	stalkie_big_nohaplotig	exon	13524286	13524441	99	+	.	Parent=comp148947_c0_seq1.mrna1;Target=comp148947_c0_seq1 4 159 +
ChrX	stalkie_big_nohaplotig	exon	13524506	13524825	99	+	.	Parent=comp148947_c0_seq1.mrna1;Target=comp148947_c0_seq1 160 479 +
ChrX	stalkie_big_nohaplotig	exon	13524884	13525135	97	+	.	Parent=comp148947_c0_seq1.mrna1;Target=comp148947_c0_seq1 480 731 +
ChrX	stalkie_big_nohaplotig	CDS	13524432	13524441	.	+	0	Parent=comp148947_c0_seq1.mrna1;Target=comp148947_c0_seq1 150 159 +
ChrX	stalkie_big_nohaplotig	CDS	13524506	13524825	.	+	2	Parent=comp148947_c0_seq1.mrna1;Target=comp148947_c0_seq1 160 479 +
ChrX	stalkie_big_nohaplotig	CDS	13524884	13525018	.	+	0	Parent=comp148947_c0_seq1.mrna1;Target=comp148947_c0_seq1 480 614 +
ChrX	gffcl	locus	13528339	13530165	.	.	.	ID=RLOC_00000765;geneIDs=comp148790_c0_seq1.path1,comp152573_c0_seq1.path1;transcripts=comp148790_c0_seq1.mrna1,comp152573_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13528339	13530165	.	+	.	ID=comp148790_c0_seq1.mrna1;geneID=comp148790_c0_seq1.path1;Name=comp148790_c0_seq1;Dir=antisensecoverage=98.3;identity=99.7;matches=1068;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000765
ChrX	stalkie_big_nohaplotig	exon	13528339	13528590	99	+	.	Parent=comp148790_c0_seq1.mrna1;Target=comp148790_c0_seq1 839 1090 -
ChrX	stalkie_big_nohaplotig	exon	13529347	13530165	99	+	.	Parent=comp148790_c0_seq1.mrna1;Target=comp148790_c0_seq1 20 838 -
ChrX	stalkie_big_nohaplotig	CDS	13528585	13528590	.	+	0	Parent=comp148790_c0_seq1.mrna1;Target=comp148790_c0_seq1 839 844 .
ChrX	stalkie_big_nohaplotig	CDS	13529347	13529673	.	+	0	Parent=comp148790_c0_seq1.mrna1;Target=comp148790_c0_seq1 512 838 .
ChrX	stalkie_big_nohaplotig	mRNA	13528568	13529367	.	-	.	ID=comp152573_c0_seq1.mrna1;geneID=comp152573_c0_seq1.path1;Name=comp152573_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=800;mismatches=0;indels=1;unknowns=0;Target=comp152573_c0_seq1 801 1 .;CDS_Target=comp152573_c0_seq1 619 578 .;locus=RLOC_00000765
ChrX	stalkie_big_nohaplotig	exon	13528568	13529367	99	-	.	Parent=comp152573_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13528750	13528790	.	-	0	Parent=comp152573_c0_seq1.mrna1
ChrX	gffcl	locus	13536223	13536876	.	-	.	ID=RLOC_00000766;geneIDs=comp152130_c0_seq1.path1;transcripts=comp152130_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13536223	13536876	.	-	.	ID=comp152130_c0_seq1.mrna1;geneID=comp152130_c0_seq1.path1;Name=comp152130_c0_seq1;Dir=indeterminatecoverage=99.5;identity=100.0;matches=654;mismatches=0;indels=0;unknowns=0;Target=comp152130_c0_seq1 654 1 .;CDS_Target=comp152130_c0_seq1 205 98 .;locus=RLOC_00000766
ChrX	stalkie_big_nohaplotig	exon	13536223	13536876	100	-	.	Parent=comp152130_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13536672	13536779	.	-	0	Parent=comp152130_c0_seq1.mrna1
ChrX	gffcl	locus	13539713	13541463	.	+	.	ID=RLOC_00000767;geneIDs=comp58779_c0_seq1.path1;transcripts=comp58779_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13539713	13541463	.	+	.	ID=comp58779_c0_seq1.mrna1;geneID=comp58779_c0_seq1.path1;Name=comp58779_c0_seq1;Dir=sensecoverage=97.4;identity=99.9;matches=1674;mismatches=2;indels=0;unknowns=0;Target=comp58779_c0_seq1 110 289 +;locus=RLOC_00000767
ChrX	stalkie_big_nohaplotig	exon	13539713	13541067	99	+	.	Parent=comp58779_c0_seq1.mrna1;Target=comp58779_c0_seq1 1 1355 +
ChrX	stalkie_big_nohaplotig	exon	13541143	13541463	100	+	.	Parent=comp58779_c0_seq1.mrna1;Target=comp58779_c0_seq1 1356 1676 +
ChrX	stalkie_big_nohaplotig	CDS	13539822	13540001	.	+	0	Parent=comp58779_c0_seq1.mrna1
ChrX	gffcl	locus	13541277	13543531	.	-	.	ID=RLOC_00000768;geneIDs=comp117286_c0_seq1.path1;transcripts=comp117286_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13541277	13543531	.	-	.	ID=comp117286_c0_seq1.mrna1;geneID=comp117286_c0_seq1.path1;Name=comp117286_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=942;mismatches=0;indels=0;unknowns=0;Target=comp117286_c0_seq1 522 710 .;locus=RLOC_00000768
ChrX	stalkie_big_nohaplotig	exon	13541277	13541300	100	-	.	Parent=comp117286_c0_seq1.mrna1;Target=comp117286_c0_seq1 1 24 -
ChrX	stalkie_big_nohaplotig	exon	13542614	13543531	100	-	.	Parent=comp117286_c0_seq1.mrna1;Target=comp117286_c0_seq1 25 942 -
ChrX	stalkie_big_nohaplotig	CDS	13543111	13543299	.	-	0	Parent=comp117286_c0_seq1.mrna1
ChrX	gffcl	locus	13546013	13546806	.	+	.	ID=RLOC_00000769;geneIDs=comp58382_c0_seq1.path1;transcripts=comp58382_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13546013	13546806	.	+	.	ID=comp58382_c0_seq1.mrna1;geneID=comp58382_c0_seq1.path1;Name=comp58382_c0_seq1;Dir=antisensecoverage=94.4;identity=100.0;matches=712;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000769
ChrX	stalkie_big_nohaplotig	exon	13546013	13546227	100	+	.	Parent=comp58382_c0_seq1.mrna1;Target=comp58382_c0_seq1 540 754 -
ChrX	stalkie_big_nohaplotig	exon	13546310	13546806	100	+	.	Parent=comp58382_c0_seq1.mrna1;Target=comp58382_c0_seq1 43 539 -
ChrX	stalkie_big_nohaplotig	CDS	13546222	13546227	.	+	0	Parent=comp58382_c0_seq1.mrna1;Target=comp58382_c0_seq1 540 545 .
ChrX	stalkie_big_nohaplotig	CDS	13546310	13546609	.	+	0	Parent=comp58382_c0_seq1.mrna1;Target=comp58382_c0_seq1 240 539 .
ChrX	gffcl	locus	13549866	13564462	.	+	.	ID=RLOC_00000770;geneIDs=FBgn0045770.1.path1;transcripts=FBgn0045770.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13549866	13564462	.	+	.	ID=FBgn0045770.1.mrna1;geneID=FBgn0045770.1.path1;Name=FBgn0045770.1;Dir=sensecoverage=100.0;identity=100.0;matches=1614;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000770
ChrX	stalkie_big_nohaplotig	exon	13549866	13550003	100	+	.	Parent=FBgn0045770.1.mrna1;Target=FBgn0045770.1 1 138 +
ChrX	stalkie_big_nohaplotig	exon	13550058	13550176	100	+	.	Parent=FBgn0045770.1.mrna1;Target=FBgn0045770.1 139 257 +
ChrX	stalkie_big_nohaplotig	exon	13561963	13562098	100	+	.	Parent=FBgn0045770.1.mrna1;Target=FBgn0045770.1 258 393 +
ChrX	stalkie_big_nohaplotig	exon	13562628	13563133	100	+	.	Parent=FBgn0045770.1.mrna1;Target=FBgn0045770.1 394 899 +
ChrX	stalkie_big_nohaplotig	exon	13563197	13563416	100	+	.	Parent=FBgn0045770.1.mrna1;Target=FBgn0045770.1 900 1119 +
ChrX	stalkie_big_nohaplotig	exon	13563473	13563722	100	+	.	Parent=FBgn0045770.1.mrna1;Target=FBgn0045770.1 1120 1369 +
ChrX	stalkie_big_nohaplotig	exon	13564147	13564220	100	+	.	Parent=FBgn0045770.1.mrna1;Target=FBgn0045770.1 1370 1443 +
ChrX	stalkie_big_nohaplotig	exon	13564292	13564462	100	+	.	Parent=FBgn0045770.1.mrna1;Target=FBgn0045770.1 1444 1614 +
ChrX	stalkie_big_nohaplotig	CDS	13549866	13550003	.	+	0	Parent=FBgn0045770.1.mrna1;Target=FBgn0045770.1 1 138 +
ChrX	stalkie_big_nohaplotig	CDS	13550058	13550176	.	+	0	Parent=FBgn0045770.1.mrna1;Target=FBgn0045770.1 139 257 +
ChrX	stalkie_big_nohaplotig	CDS	13561963	13562098	.	+	1	Parent=FBgn0045770.1.mrna1;Target=FBgn0045770.1 258 393 +
ChrX	stalkie_big_nohaplotig	CDS	13562628	13563133	.	+	0	Parent=FBgn0045770.1.mrna1;Target=FBgn0045770.1 394 899 +
ChrX	stalkie_big_nohaplotig	CDS	13563197	13563416	.	+	1	Parent=FBgn0045770.1.mrna1;Target=FBgn0045770.1 900 1119 +
ChrX	stalkie_big_nohaplotig	CDS	13563473	13563722	.	+	0	Parent=FBgn0045770.1.mrna1;Target=FBgn0045770.1 1120 1369 +
ChrX	stalkie_big_nohaplotig	CDS	13564147	13564220	.	+	2	Parent=FBgn0045770.1.mrna1;Target=FBgn0045770.1 1370 1443 +
ChrX	stalkie_big_nohaplotig	CDS	13564292	13564462	.	+	0	Parent=FBgn0045770.1.mrna1;Target=FBgn0045770.1 1444 1614 +
ChrX	gffcl	locus	13566223	13566742	.	+	.	ID=RLOC_00000771;geneIDs=comp58287_c0_seq1.path1;transcripts=comp58287_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13566223	13566742	.	+	.	ID=comp58287_c0_seq1.mrna1;geneID=comp58287_c0_seq1.path1;Name=comp58287_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=397;mismatches=1;indels=0;unknowns=0;Target=comp58287_c0_seq1 276 398 .;locus=RLOC_00000771
ChrX	stalkie_big_nohaplotig	exon	13566223	13566594	100	+	.	Parent=comp58287_c0_seq1.mrna1;Target=comp58287_c0_seq1 27 398 -
ChrX	stalkie_big_nohaplotig	exon	13566717	13566742	96	+	.	Parent=comp58287_c0_seq1.mrna1;Target=comp58287_c0_seq1 1 26 -
ChrX	stalkie_big_nohaplotig	CDS	13566223	13566345	.	+	0	Parent=comp58287_c0_seq1.mrna1
ChrX	gffcl	locus	13570417	13570888	.	+	.	ID=RLOC_00000772;geneIDs=comp143863_c0_seq1.path1;transcripts=comp143863_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13570417	13570888	.	+	.	ID=comp143863_c0_seq1.mrna1;geneID=comp143863_c0_seq1.path1;Name=comp143863_c0_seq1;Dir=sensecoverage=83.1;identity=100.0;matches=394;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000772
ChrX	stalkie_big_nohaplotig	exon	13570417	13570468	100	+	.	Parent=comp143863_c0_seq1.mrna1;Target=comp143863_c0_seq1 62 113 +
ChrX	stalkie_big_nohaplotig	exon	13570547	13570888	100	+	.	Parent=comp143863_c0_seq1.mrna1;Target=comp143863_c0_seq1 114 455 +
ChrX	stalkie_big_nohaplotig	CDS	13570418	13570468	.	+	0	Parent=comp143863_c0_seq1.mrna1;Target=comp143863_c0_seq1 63 113 +
ChrX	stalkie_big_nohaplotig	CDS	13570547	13570711	.	+	0	Parent=comp143863_c0_seq1.mrna1;Target=comp143863_c0_seq1 114 278 +
ChrX	gffcl	locus	13573698	13574157	.	+	.	ID=RLOC_00000773;geneIDs=comp148610_c0_seq1.path1;transcripts=comp148610_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13573698	13574157	.	+	.	ID=comp148610_c0_seq1.mrna1;geneID=comp148610_c0_seq1.path1;Name=comp148610_c0_seq1;Dir=antisensecoverage=96.7;identity=99.7;matches=353;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000773
ChrX	stalkie_big_nohaplotig	exon	13573698	13573714	100	+	.	Parent=comp148610_c0_seq1.mrna1;Target=comp148610_c0_seq1 350 366 -
ChrX	stalkie_big_nohaplotig	exon	13573821	13574157	99	+	.	Parent=comp148610_c0_seq1.mrna1;Target=comp148610_c0_seq1 13 349 -
ChrX	stalkie_big_nohaplotig	CDS	13573699	13573714	.	+	0	Parent=comp148610_c0_seq1.mrna1;Target=comp148610_c0_seq1 350 365 .
ChrX	stalkie_big_nohaplotig	CDS	13573821	13574065	.	+	2	Parent=comp148610_c0_seq1.mrna1;Target=comp148610_c0_seq1 105 349 .
ChrX	gffcl	locus	13576559	13577269	.	+	.	ID=RLOC_00000774;geneIDs=comp58352_c0_seq1.path1;transcripts=comp58352_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13576559	13577269	.	+	.	ID=comp58352_c0_seq1.mrna1;geneID=comp58352_c0_seq1.path1;Name=comp58352_c0_seq1;Dir=sensecoverage=96.9;identity=99.4;matches=625;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000774
ChrX	stalkie_big_nohaplotig	exon	13576559	13576870	98	+	.	Parent=comp58352_c0_seq1.mrna1;Target=comp58352_c0_seq1 6 317 +
ChrX	stalkie_big_nohaplotig	exon	13576953	13577269	100	+	.	Parent=comp58352_c0_seq1.mrna1;Target=comp58352_c0_seq1 318 634 +
ChrX	stalkie_big_nohaplotig	CDS	13576747	13576870	.	+	0	Parent=comp58352_c0_seq1.mrna1;Target=comp58352_c0_seq1 194 317 +
ChrX	stalkie_big_nohaplotig	CDS	13576953	13577017	.	+	2	Parent=comp58352_c0_seq1.mrna1;Target=comp58352_c0_seq1 318 382 +
ChrX	gffcl	locus	13580694	13581275	.	+	.	ID=RLOC_00000775;geneIDs=comp58345_c0_seq1.path1;transcripts=comp58345_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13580694	13581275	.	+	.	ID=comp58345_c0_seq1.mrna1;geneID=comp58345_c0_seq1.path1;Name=comp58345_c0_seq1;Dir=sensecoverage=97.6;identity=99.8;matches=520;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000775
ChrX	stalkie_big_nohaplotig	exon	13580694	13580840	100	+	.	Parent=comp58345_c0_seq1.mrna1;Target=comp58345_c0_seq1 1 147 +
ChrX	stalkie_big_nohaplotig	exon	13580902	13581275	99	+	.	Parent=comp58345_c0_seq1.mrna1;Target=comp58345_c0_seq1 148 521 +
ChrX	stalkie_big_nohaplotig	CDS	13580835	13580840	.	+	0	Parent=comp58345_c0_seq1.mrna1;Target=comp58345_c0_seq1 142 147 +
ChrX	stalkie_big_nohaplotig	CDS	13580902	13581105	.	+	0	Parent=comp58345_c0_seq1.mrna1;Target=comp58345_c0_seq1 148 351 +
ChrX	gffcl	locus	13585692	13587159	.	+	.	ID=RLOC_00000776;geneIDs=comp125700_c0_seq1.path1;transcripts=comp125700_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13585692	13587159	.	+	.	ID=comp125700_c0_seq1.mrna1;geneID=comp125700_c0_seq1.path1;Name=comp125700_c0_seq1;Dir=sensecoverage=100.0;identity=96.4;matches=1345;mismatches=5;indels=45;unknowns=0;locus=RLOC_00000776
ChrX	stalkie_big_nohaplotig	exon	13585692	13585743	100	+	.	Parent=comp125700_c0_seq1.mrna1;Target=comp125700_c0_seq1 1 52 +
ChrX	stalkie_big_nohaplotig	exon	13585817	13587159	96	+	.	Parent=comp125700_c0_seq1.mrna1;Target=comp125700_c0_seq1 53 1350 +
ChrX	stalkie_big_nohaplotig	CDS	13585738	13585743	.	+	0	Parent=comp125700_c0_seq1.mrna1;Target=comp125700_c0_seq1 47 52 +
ChrX	stalkie_big_nohaplotig	CDS	13585817	13586365	.	+	0	Parent=comp125700_c0_seq1.mrna1;Target=comp125700_c0_seq1 53 556 +
ChrX	gffcl	locus	13590128	13590264	.	-	.	ID=RLOC_00000777;geneIDs=comp125063_c0_seq1.path2;transcripts=comp125063_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	13590128	13590264	.	-	.	ID=comp125063_c0_seq1.mrna2;geneID=comp125063_c0_seq1.path2;Name=comp125063_c0_seq1;Dir=indeterminatecoverage=27.4;identity=99.3;matches=136;mismatches=1;indels=0;unknowns=0;Target=comp125063_c0_seq1 500 364 .;locus=RLOC_00000777
ChrX	stalkie_big_nohaplotig	exon	13590128	13590264	99	-	.	Parent=comp125063_c0_seq1.mrna2
ChrX	gffcl	locus	13590711	13592015	.	-	.	ID=RLOC_00000778;geneIDs=comp149202_c0_seq1.path1;transcripts=comp149202_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13590711	13592015	.	-	.	ID=comp149202_c0_seq1.mrna1;geneID=comp149202_c0_seq1.path1;Name=comp149202_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.9;matches=1281;mismatches=24;indels=3;unknowns=0;Target=comp149202_c0_seq1 1311 4 .;CDS_Target=comp149202_c0_seq1 455 159 .;locus=RLOC_00000778
ChrX	stalkie_big_nohaplotig	exon	13590711	13592015	97	-	.	Parent=comp149202_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13591564	13591860	.	-	0	Parent=comp149202_c0_seq1.mrna1
ChrX	gffcl	locus	13600491	13601071	.	+	.	ID=RLOC_00000779;geneIDs=comp135169_c1_seq1.path1;transcripts=comp135169_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13600491	13601071	.	+	.	ID=comp135169_c1_seq1.mrna1;geneID=comp135169_c1_seq1.path1;Name=comp135169_c1_seq1;Dir=antisensecoverage=96.6;identity=100.0;matches=509;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000779
ChrX	stalkie_big_nohaplotig	exon	13600491	13600588	100	+	.	Parent=comp135169_c1_seq1.mrna1;Target=comp135169_c1_seq1 412 509 -
ChrX	stalkie_big_nohaplotig	exon	13600661	13601071	100	+	.	Parent=comp135169_c1_seq1.mrna1;Target=comp135169_c1_seq1 1 411 -
ChrX	stalkie_big_nohaplotig	CDS	13600493	13600588	.	+	0	Parent=comp135169_c1_seq1.mrna1;Target=comp135169_c1_seq1 412 507 .
ChrX	stalkie_big_nohaplotig	CDS	13600661	13601071	.	+	0	Parent=comp135169_c1_seq1.mrna1;Target=comp135169_c1_seq1 1 411 .
ChrX	gffcl	locus	13606977	13608340	.	+	.	ID=RLOC_00000780;geneIDs=comp148648_c0_seq1.path1;transcripts=comp148648_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13606977	13608340	.	+	.	ID=comp148648_c0_seq1.mrna1;geneID=comp148648_c0_seq1.path1;Name=comp148648_c0_seq1;Dir=sensecoverage=96.2;identity=99.3;matches=1278;mismatches=9;indels=0;unknowns=0;locus=RLOC_00000780
ChrX	stalkie_big_nohaplotig	exon	13606977	13607083	99	+	.	Parent=comp148648_c0_seq1.mrna1;Target=comp148648_c0_seq1 25 131 +
ChrX	stalkie_big_nohaplotig	exon	13607161	13608340	99	+	.	Parent=comp148648_c0_seq1.mrna1;Target=comp148648_c0_seq1 132 1311 +
ChrX	stalkie_big_nohaplotig	CDS	13606979	13607083	.	+	0	Parent=comp148648_c0_seq1.mrna1;Target=comp148648_c0_seq1 27 131 +
ChrX	stalkie_big_nohaplotig	CDS	13607161	13607598	.	+	0	Parent=comp148648_c0_seq1.mrna1;Target=comp148648_c0_seq1 132 569 +
ChrX	gffcl	locus	13621554	13622573	.	+	.	ID=RLOC_00000781;geneIDs=comp148893_c0_seq1.path1;transcripts=comp148893_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13621554	13622573	.	+	.	ID=comp148893_c0_seq1.mrna1;geneID=comp148893_c0_seq1.path1;Name=comp148893_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.2;matches=1020;mismatches=0;indels=98;unknowns=0;Target=comp148893_c0_seq1 1118 1 .;CDS_Target=comp148893_c0_seq1 343 2 .;locus=RLOC_00000781
ChrX	stalkie_big_nohaplotig	exon	13621554	13622573	91	+	.	Parent=comp148893_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13621555	13621896	.	+	0	Parent=comp148893_c0_seq1.mrna1
ChrX	gffcl	locus	13631410	13631756	.	-	.	ID=RLOC_00000782;geneIDs=comp134927_c0_seq1.path1;transcripts=comp134927_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13631410	13631756	.	-	.	ID=comp134927_c0_seq1.mrna1;geneID=comp134927_c0_seq1.path1;Name=comp134927_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.0;matches=347;mismatches=0;indels=30;unknowns=0;Target=comp134927_c0_seq1 377 1 .;CDS_Target=comp134927_c0_seq1 288 1 .;locus=RLOC_00000782
ChrX	stalkie_big_nohaplotig	exon	13631410	13631756	92	-	.	Parent=comp134927_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13631499	13631756	.	-	0	Parent=comp134927_c0_seq1.mrna1
ChrX	gffcl	locus	13636149	13636414	.	-	.	ID=RLOC_00000783;geneIDs=comp140753_c0_seq1.path1;transcripts=comp140753_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13636149	13636414	.	-	.	ID=comp140753_c0_seq1.mrna1;geneID=comp140753_c0_seq1.path1;Name=comp140753_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=263;mismatches=3;indels=0;unknowns=0;Target=comp140753_c0_seq1 266 1 .;CDS_Target=comp140753_c0_seq1 106 2 .;locus=RLOC_00000783
ChrX	stalkie_big_nohaplotig	exon	13636149	13636414	98	-	.	Parent=comp140753_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13636309	13636413	.	-	0	Parent=comp140753_c0_seq1.mrna1
ChrX	gffcl	locus	13645833	13653676	.	+	.	ID=RLOC_00000784;geneIDs=FBgn0031939.1.path1;transcripts=FBgn0031939.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13645833	13653676	.	+	.	ID=FBgn0031939.1.mrna1;geneID=FBgn0031939.1.path1;Name=FBgn0031939.1;Dir=sensecoverage=100.0;identity=99.8;matches=1999;mismatches=2;indels=3;unknowns=0;locus=RLOC_00000784
ChrX	stalkie_big_nohaplotig	exon	13645833	13646283	99	+	.	Parent=FBgn0031939.1.mrna1;Target=FBgn0031939.1 1 448 +
ChrX	stalkie_big_nohaplotig	exon	13646979	13647110	100	+	.	Parent=FBgn0031939.1.mrna1;Target=FBgn0031939.1 449 580 +
ChrX	stalkie_big_nohaplotig	exon	13647200	13647375	100	+	.	Parent=FBgn0031939.1.mrna1;Target=FBgn0031939.1 581 756 +
ChrX	stalkie_big_nohaplotig	exon	13647446	13647486	100	+	.	Parent=FBgn0031939.1.mrna1;Target=FBgn0031939.1 757 797 +
ChrX	stalkie_big_nohaplotig	exon	13647560	13647680	100	+	.	Parent=FBgn0031939.1.mrna1;Target=FBgn0031939.1 798 918 +
ChrX	stalkie_big_nohaplotig	exon	13647755	13648097	99	+	.	Parent=FBgn0031939.1.mrna1;Target=FBgn0031939.1 919 1261 +
ChrX	stalkie_big_nohaplotig	exon	13649195	13649352	100	+	.	Parent=FBgn0031939.1.mrna1;Target=FBgn0031939.1 1262 1419 +
ChrX	stalkie_big_nohaplotig	exon	13651624	13651752	100	+	.	Parent=FBgn0031939.1.mrna1;Target=FBgn0031939.1 1420 1548 +
ChrX	stalkie_big_nohaplotig	exon	13653085	13653291	100	+	.	Parent=FBgn0031939.1.mrna1;Target=FBgn0031939.1 1549 1755 +
ChrX	stalkie_big_nohaplotig	exon	13653431	13653676	100	+	.	Parent=FBgn0031939.1.mrna1;Target=FBgn0031939.1 1756 2001 +
ChrX	stalkie_big_nohaplotig	CDS	13645833	13646283	.	+	0	Parent=FBgn0031939.1.mrna1;Target=FBgn0031939.1 1 448 +
ChrX	stalkie_big_nohaplotig	CDS	13646979	13647110	.	+	2	Parent=FBgn0031939.1.mrna1;Target=FBgn0031939.1 449 580 +
ChrX	stalkie_big_nohaplotig	CDS	13647200	13647375	.	+	2	Parent=FBgn0031939.1.mrna1;Target=FBgn0031939.1 581 756 +
ChrX	stalkie_big_nohaplotig	CDS	13647446	13647486	.	+	0	Parent=FBgn0031939.1.mrna1;Target=FBgn0031939.1 757 797 +
ChrX	stalkie_big_nohaplotig	CDS	13647560	13647680	.	+	1	Parent=FBgn0031939.1.mrna1;Target=FBgn0031939.1 798 918 +
ChrX	stalkie_big_nohaplotig	CDS	13647755	13648097	.	+	0	Parent=FBgn0031939.1.mrna1;Target=FBgn0031939.1 919 1261 +
ChrX	stalkie_big_nohaplotig	CDS	13649195	13649352	.	+	2	Parent=FBgn0031939.1.mrna1;Target=FBgn0031939.1 1262 1419 +
ChrX	stalkie_big_nohaplotig	CDS	13651624	13651752	.	+	0	Parent=FBgn0031939.1.mrna1;Target=FBgn0031939.1 1420 1548 +
ChrX	stalkie_big_nohaplotig	CDS	13653085	13653291	.	+	0	Parent=FBgn0031939.1.mrna1;Target=FBgn0031939.1 1549 1755 +
ChrX	stalkie_big_nohaplotig	CDS	13653431	13653676	.	+	0	Parent=FBgn0031939.1.mrna1;Target=FBgn0031939.1 1756 2001 +
ChrX	gffcl	locus	13657944	13662266	.	+	.	ID=RLOC_00000785;geneIDs=FBgn0031936.1.path1;transcripts=FBgn0031936.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13657944	13662266	.	+	.	ID=FBgn0031936.1.mrna1;geneID=FBgn0031936.1.path1;Name=FBgn0031936.1;Dir=sensecoverage=100.0;identity=99.6;matches=1811;mismatches=7;indels=0;unknowns=0;locus=RLOC_00000785
ChrX	stalkie_big_nohaplotig	exon	13657944	13658124	99	+	.	Parent=FBgn0031936.1.mrna1;Target=FBgn0031936.1 1 181 +
ChrX	stalkie_big_nohaplotig	exon	13659190	13659321	100	+	.	Parent=FBgn0031936.1.mrna1;Target=FBgn0031936.1 182 313 +
ChrX	stalkie_big_nohaplotig	exon	13659408	13659568	100	+	.	Parent=FBgn0031936.1.mrna1;Target=FBgn0031936.1 314 474 +
ChrX	stalkie_big_nohaplotig	exon	13659624	13659739	99	+	.	Parent=FBgn0031936.1.mrna1;Target=FBgn0031936.1 475 590 +
ChrX	stalkie_big_nohaplotig	exon	13659799	13659934	99	+	.	Parent=FBgn0031936.1.mrna1;Target=FBgn0031936.1 591 726 +
ChrX	stalkie_big_nohaplotig	exon	13660911	13661238	100	+	.	Parent=FBgn0031936.1.mrna1;Target=FBgn0031936.1 727 1054 +
ChrX	stalkie_big_nohaplotig	exon	13661304	13661452	100	+	.	Parent=FBgn0031936.1.mrna1;Target=FBgn0031936.1 1055 1203 +
ChrX	stalkie_big_nohaplotig	exon	13661517	13661645	100	+	.	Parent=FBgn0031936.1.mrna1;Target=FBgn0031936.1 1204 1332 +
ChrX	stalkie_big_nohaplotig	exon	13661711	13661917	98	+	.	Parent=FBgn0031936.1.mrna1;Target=FBgn0031936.1 1333 1539 +
ChrX	stalkie_big_nohaplotig	exon	13661988	13662266	99	+	.	Parent=FBgn0031936.1.mrna1;Target=FBgn0031936.1 1540 1818 +
ChrX	stalkie_big_nohaplotig	CDS	13657944	13658124	.	+	0	Parent=FBgn0031936.1.mrna1;Target=FBgn0031936.1 1 181 +
ChrX	stalkie_big_nohaplotig	CDS	13659190	13659321	.	+	2	Parent=FBgn0031936.1.mrna1;Target=FBgn0031936.1 182 313 +
ChrX	stalkie_big_nohaplotig	CDS	13659408	13659568	.	+	2	Parent=FBgn0031936.1.mrna1;Target=FBgn0031936.1 314 474 +
ChrX	stalkie_big_nohaplotig	CDS	13659624	13659739	.	+	0	Parent=FBgn0031936.1.mrna1;Target=FBgn0031936.1 475 590 +
ChrX	stalkie_big_nohaplotig	CDS	13659799	13659934	.	+	1	Parent=FBgn0031936.1.mrna1;Target=FBgn0031936.1 591 726 +
ChrX	stalkie_big_nohaplotig	CDS	13660911	13661238	.	+	0	Parent=FBgn0031936.1.mrna1;Target=FBgn0031936.1 727 1054 +
ChrX	stalkie_big_nohaplotig	CDS	13661304	13661452	.	+	2	Parent=FBgn0031936.1.mrna1;Target=FBgn0031936.1 1055 1203 +
ChrX	stalkie_big_nohaplotig	CDS	13661517	13661645	.	+	0	Parent=FBgn0031936.1.mrna1;Target=FBgn0031936.1 1204 1332 +
ChrX	stalkie_big_nohaplotig	CDS	13661711	13661917	.	+	0	Parent=FBgn0031936.1.mrna1;Target=FBgn0031936.1 1333 1539 +
ChrX	stalkie_big_nohaplotig	CDS	13661988	13662266	.	+	0	Parent=FBgn0031936.1.mrna1;Target=FBgn0031936.1 1540 1818 +
ChrX	gffcl	locus	13666068	13674519	.	+	.	ID=RLOC_00000786;geneIDs=FBgn0031937.1.path1;transcripts=FBgn0031937.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13666068	13674519	.	+	.	ID=FBgn0031937.1.mrna1;geneID=FBgn0031937.1.path1;Name=FBgn0031937.1;Dir=sensecoverage=100.0;identity=99.9;matches=1855;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000786
ChrX	stalkie_big_nohaplotig	exon	13666068	13666311	99	+	.	Parent=FBgn0031937.1.mrna1;Target=FBgn0031937.1 1 244 +
ChrX	stalkie_big_nohaplotig	exon	13669913	13670044	100	+	.	Parent=FBgn0031937.1.mrna1;Target=FBgn0031937.1 245 376 +
ChrX	stalkie_big_nohaplotig	exon	13670117	13670286	100	+	.	Parent=FBgn0031937.1.mrna1;Target=FBgn0031937.1 377 546 +
ChrX	stalkie_big_nohaplotig	exon	13670345	13670427	100	+	.	Parent=FBgn0031937.1.mrna1;Target=FBgn0031937.1 547 629 +
ChrX	stalkie_big_nohaplotig	exon	13670486	13670621	100	+	.	Parent=FBgn0031937.1.mrna1;Target=FBgn0031937.1 630 765 +
ChrX	stalkie_big_nohaplotig	exon	13670737	13671064	100	+	.	Parent=FBgn0031937.1.mrna1;Target=FBgn0031937.1 766 1093 +
ChrX	stalkie_big_nohaplotig	exon	13671133	13671281	99	+	.	Parent=FBgn0031937.1.mrna1;Target=FBgn0031937.1 1094 1242 +
ChrX	stalkie_big_nohaplotig	exon	13673758	13673886	100	+	.	Parent=FBgn0031937.1.mrna1;Target=FBgn0031937.1 1243 1371 +
ChrX	stalkie_big_nohaplotig	exon	13673974	13674180	100	+	.	Parent=FBgn0031937.1.mrna1;Target=FBgn0031937.1 1372 1578 +
ChrX	stalkie_big_nohaplotig	exon	13674241	13674519	100	+	.	Parent=FBgn0031937.1.mrna1;Target=FBgn0031937.1 1579 1857 +
ChrX	stalkie_big_nohaplotig	CDS	13666068	13666311	.	+	0	Parent=FBgn0031937.1.mrna1;Target=FBgn0031937.1 1 244 +
ChrX	stalkie_big_nohaplotig	CDS	13669913	13670044	.	+	2	Parent=FBgn0031937.1.mrna1;Target=FBgn0031937.1 245 376 +
ChrX	stalkie_big_nohaplotig	CDS	13670117	13670286	.	+	2	Parent=FBgn0031937.1.mrna1;Target=FBgn0031937.1 377 546 +
ChrX	stalkie_big_nohaplotig	CDS	13670345	13670427	.	+	0	Parent=FBgn0031937.1.mrna1;Target=FBgn0031937.1 547 629 +
ChrX	stalkie_big_nohaplotig	CDS	13670486	13670621	.	+	1	Parent=FBgn0031937.1.mrna1;Target=FBgn0031937.1 630 765 +
ChrX	stalkie_big_nohaplotig	CDS	13670737	13671064	.	+	0	Parent=FBgn0031937.1.mrna1;Target=FBgn0031937.1 766 1093 +
ChrX	stalkie_big_nohaplotig	CDS	13671133	13671281	.	+	2	Parent=FBgn0031937.1.mrna1;Target=FBgn0031937.1 1094 1242 +
ChrX	stalkie_big_nohaplotig	CDS	13673758	13673886	.	+	0	Parent=FBgn0031937.1.mrna1;Target=FBgn0031937.1 1243 1371 +
ChrX	stalkie_big_nohaplotig	CDS	13673974	13674180	.	+	0	Parent=FBgn0031937.1.mrna1;Target=FBgn0031937.1 1372 1578 +
ChrX	stalkie_big_nohaplotig	CDS	13674241	13674519	.	+	0	Parent=FBgn0031937.1.mrna1;Target=FBgn0031937.1 1579 1857 +
ChrX	gffcl	locus	13671482	13673608	.	-	.	ID=RLOC_00000787;geneIDs=comp151881_c0_seq1.path1,comp154518_c0_seq1.path1;transcripts=comp154518_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13671482	13672909	.	-	.	ID=comp154518_c0_seq1.mrna1;geneID=comp154518_c0_seq1.path1;Name=comp154518_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1426;mismatches=2;indels=0;unknowns=0;Target=comp154518_c0_seq1 1428 1 .;CDS_Target=comp154518_c0_seq1 170 3 .;locus=RLOC_00000787
ChrX	stalkie_big_nohaplotig	exon	13671482	13672909	99	-	.	Parent=comp154518_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13672740	13672907	.	-	0	Parent=comp154518_c0_seq1.mrna1
ChrX	gffcl	locus	13690721	13697039	.	-	.	ID=RLOC_00000789;geneIDs=FBgn0041181.1.path1;transcripts=FBgn0041181.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13690721	13697039	.	-	.	ID=FBgn0041181.1.mrna1;geneID=FBgn0041181.1.path1;Name=FBgn0041181.1;Dir=sensecoverage=96.4;identity=99.9;matches=4310;mismatches=5;indels=0;unknowns=0;locus=RLOC_00000789
ChrX	stalkie_big_nohaplotig	exon	13690721	13691098	100	-	.	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 4099 4476 +
ChrX	stalkie_big_nohaplotig	exon	13691230	13691353	100	-	.	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 3975 4098 +
ChrX	stalkie_big_nohaplotig	exon	13691433	13691608	100	-	.	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 3799 3974 +
ChrX	stalkie_big_nohaplotig	exon	13691673	13692028	100	-	.	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 3443 3798 +
ChrX	stalkie_big_nohaplotig	exon	13692081	13692258	99	-	.	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 3265 3442 +
ChrX	stalkie_big_nohaplotig	exon	13692320	13692667	100	-	.	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 2917 3264 +
ChrX	stalkie_big_nohaplotig	exon	13692726	13693144	100	-	.	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 2498 2916 +
ChrX	stalkie_big_nohaplotig	exon	13693203	13693334	100	-	.	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 2366 2497 +
ChrX	stalkie_big_nohaplotig	exon	13693404	13693814	100	-	.	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 1955 2365 +
ChrX	stalkie_big_nohaplotig	exon	13693881	13694018	100	-	.	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 1817 1954 +
ChrX	stalkie_big_nohaplotig	exon	13694178	13694301	99	-	.	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 1693 1816 +
ChrX	stalkie_big_nohaplotig	exon	13694357	13694503	99	-	.	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 1546 1692 +
ChrX	stalkie_big_nohaplotig	exon	13695319	13695430	100	-	.	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 1434 1545 +
ChrX	stalkie_big_nohaplotig	exon	13695492	13695586	100	-	.	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 1339 1433 +
ChrX	stalkie_big_nohaplotig	exon	13695649	13695837	100	-	.	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 1150 1338 +
ChrX	stalkie_big_nohaplotig	exon	13695901	13696231	100	-	.	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 819 1149 +
ChrX	stalkie_big_nohaplotig	exon	13696289	13696767	99	-	.	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 340 818 +
ChrX	stalkie_big_nohaplotig	exon	13696862	13697039	100	-	.	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 162 339 +
ChrX	stalkie_big_nohaplotig	CDS	13690721	13691098	.	-	0	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 4099 4476 +
ChrX	stalkie_big_nohaplotig	CDS	13691230	13691353	.	-	1	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 3975 4098 +
ChrX	stalkie_big_nohaplotig	CDS	13691433	13691608	.	-	0	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 3799 3974 +
ChrX	stalkie_big_nohaplotig	CDS	13691673	13692028	.	-	2	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 3443 3798 +
ChrX	stalkie_big_nohaplotig	CDS	13692081	13692258	.	-	0	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 3265 3442 +
ChrX	stalkie_big_nohaplotig	CDS	13692320	13692667	.	-	0	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 2917 3264 +
ChrX	stalkie_big_nohaplotig	CDS	13692726	13693144	.	-	2	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 2498 2916 +
ChrX	stalkie_big_nohaplotig	CDS	13693203	13693334	.	-	2	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 2366 2497 +
ChrX	stalkie_big_nohaplotig	CDS	13693404	13693814	.	-	2	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 1955 2365 +
ChrX	stalkie_big_nohaplotig	CDS	13693881	13694018	.	-	2	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 1817 1954 +
ChrX	stalkie_big_nohaplotig	CDS	13694178	13694301	.	-	0	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 1693 1816 +
ChrX	stalkie_big_nohaplotig	CDS	13694357	13694503	.	-	0	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 1546 1692 +
ChrX	stalkie_big_nohaplotig	CDS	13695319	13695430	.	-	1	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 1434 1545 +
ChrX	stalkie_big_nohaplotig	CDS	13695492	13695586	.	-	0	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 1339 1433 +
ChrX	stalkie_big_nohaplotig	CDS	13695649	13695837	.	-	0	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 1150 1338 +
ChrX	stalkie_big_nohaplotig	CDS	13695901	13696231	.	-	1	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 819 1149 +
ChrX	stalkie_big_nohaplotig	CDS	13696289	13696767	.	-	0	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 340 818 +
ChrX	stalkie_big_nohaplotig	CDS	13696862	13697038	.	-	0	Parent=FBgn0041181.1.mrna1;Target=FBgn0041181.1 163 339 +
ChrX	gffcl	locus	13707818	13708073	.	-	.	ID=RLOC_00000790;geneIDs=comp362082_c0_seq1.path1;transcripts=comp362082_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13707818	13708073	.	-	.	ID=comp362082_c0_seq1.mrna1;geneID=comp362082_c0_seq1.path1;Name=comp362082_c0_seq1;Dir=indeterminatecoverage=92.1;identity=100.0;matches=256;mismatches=0;indels=0;unknowns=0;Target=comp362082_c0_seq1 278 23 .;CDS_Target=comp362082_c0_seq1 103 23 .;locus=RLOC_00000790
ChrX	stalkie_big_nohaplotig	exon	13707818	13708073	100	-	.	Parent=comp362082_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13707993	13708073	.	-	0	Parent=comp362082_c0_seq1.mrna1
ChrX	gffcl	locus	13710461	13710983	.	+	.	ID=RLOC_00000791;geneIDs=Dv_FBgn0207380.1.path1;transcripts=Dv_FBgn0207380.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13710461	13710983	.	+	.	ID=Dv_FBgn0207380.1.mrna1;geneID=Dv_FBgn0207380.1.path1;Name=Dv_FBgn0207380.1;Dir=sensecoverage=99.3;identity=96.2;matches=436;mismatches=17;indels=0;unknowns=0;locus=RLOC_00000791
ChrX	stalkie_big_nohaplotig	exon	13710461	13710646	100	+	.	Parent=Dv_FBgn0207380.1.mrna1;Target=Dv_FBgn0207380.1 4 189 +
ChrX	stalkie_big_nohaplotig	exon	13710717	13710983	93	+	.	Parent=Dv_FBgn0207380.1.mrna1;Target=Dv_FBgn0207380.1 190 456 +
ChrX	stalkie_big_nohaplotig	CDS	13710461	13710646	.	+	0	Parent=Dv_FBgn0207380.1.mrna1;Target=Dv_FBgn0207380.1 4 189 +
ChrX	stalkie_big_nohaplotig	CDS	13710717	13710983	.	+	0	Parent=Dv_FBgn0207380.1.mrna1;Target=Dv_FBgn0207380.1 190 456 +
ChrX	gffcl	locus	13713520	13722671	.	+	.	ID=RLOC_00000792;geneIDs=FBgn0041182.1.path1;transcripts=FBgn0041182.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13713520	13722671	.	+	.	ID=FBgn0041182.1.mrna1;geneID=FBgn0041182.1.path1;Name=FBgn0041182.1;Dir=sensecoverage=100.0;identity=100.0;matches=4256;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000792
ChrX	stalkie_big_nohaplotig	exon	13713520	13713632	100	+	.	Parent=FBgn0041182.1.mrna1;Target=FBgn0041182.1 1 113 +
ChrX	stalkie_big_nohaplotig	exon	13717733	13718141	100	+	.	Parent=FBgn0041182.1.mrna1;Target=FBgn0041182.1 114 522 +
ChrX	stalkie_big_nohaplotig	exon	13718242	13719143	100	+	.	Parent=FBgn0041182.1.mrna1;Target=FBgn0041182.1 523 1424 +
ChrX	stalkie_big_nohaplotig	exon	13719215	13719476	100	+	.	Parent=FBgn0041182.1.mrna1;Target=FBgn0041182.1 1425 1686 +
ChrX	stalkie_big_nohaplotig	exon	13719542	13719815	100	+	.	Parent=FBgn0041182.1.mrna1;Target=FBgn0041182.1 1687 1960 +
ChrX	stalkie_big_nohaplotig	exon	13720032	13720242	100	+	.	Parent=FBgn0041182.1.mrna1;Target=FBgn0041182.1 1961 2171 +
ChrX	stalkie_big_nohaplotig	exon	13720308	13720486	100	+	.	Parent=FBgn0041182.1.mrna1;Target=FBgn0041182.1 2172 2350 +
ChrX	stalkie_big_nohaplotig	exon	13720550	13721082	100	+	.	Parent=FBgn0041182.1.mrna1;Target=FBgn0041182.1 2351 2883 +
ChrX	stalkie_big_nohaplotig	exon	13721167	13722045	100	+	.	Parent=FBgn0041182.1.mrna1;Target=FBgn0041182.1 2884 3762 +
ChrX	stalkie_big_nohaplotig	exon	13722111	13722419	100	+	.	Parent=FBgn0041182.1.mrna1;Target=FBgn0041182.1 3763 4071 +
ChrX	stalkie_big_nohaplotig	exon	13722486	13722671	99	+	.	Parent=FBgn0041182.1.mrna1;Target=FBgn0041182.1 4072 4257 +
ChrX	stalkie_big_nohaplotig	CDS	13713520	13713632	.	+	0	Parent=FBgn0041182.1.mrna1;Target=FBgn0041182.1 1 113 +
ChrX	stalkie_big_nohaplotig	CDS	13717733	13718141	.	+	1	Parent=FBgn0041182.1.mrna1;Target=FBgn0041182.1 114 522 +
ChrX	stalkie_big_nohaplotig	CDS	13718242	13719143	.	+	0	Parent=FBgn0041182.1.mrna1;Target=FBgn0041182.1 523 1424 +
ChrX	stalkie_big_nohaplotig	CDS	13719215	13719476	.	+	1	Parent=FBgn0041182.1.mrna1;Target=FBgn0041182.1 1425 1686 +
ChrX	stalkie_big_nohaplotig	CDS	13719542	13719815	.	+	0	Parent=FBgn0041182.1.mrna1;Target=FBgn0041182.1 1687 1960 +
ChrX	stalkie_big_nohaplotig	CDS	13720032	13720242	.	+	2	Parent=FBgn0041182.1.mrna1;Target=FBgn0041182.1 1961 2171 +
ChrX	stalkie_big_nohaplotig	CDS	13720308	13720486	.	+	1	Parent=FBgn0041182.1.mrna1;Target=FBgn0041182.1 2172 2350 +
ChrX	stalkie_big_nohaplotig	CDS	13720550	13721082	.	+	2	Parent=FBgn0041182.1.mrna1;Target=FBgn0041182.1 2351 2883 +
ChrX	stalkie_big_nohaplotig	CDS	13721167	13722045	.	+	0	Parent=FBgn0041182.1.mrna1;Target=FBgn0041182.1 2884 3762 +
ChrX	stalkie_big_nohaplotig	CDS	13722111	13722419	.	+	0	Parent=FBgn0041182.1.mrna1;Target=FBgn0041182.1 3763 4071 +
ChrX	stalkie_big_nohaplotig	CDS	13722486	13722671	.	+	0	Parent=FBgn0041182.1.mrna1;Target=FBgn0041182.1 4072 4257 +
ChrX	gffcl	locus	13725312	13732806	.	+	.	ID=RLOC_00000793;geneIDs=FBgn0041182.2.path1;transcripts=FBgn0041182.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13725312	13732806	.	+	.	ID=FBgn0041182.2.mrna1;geneID=FBgn0041182.2.path1;Name=FBgn0041182.2;Dir=sensecoverage=100.0;identity=99.9;matches=4106;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000793
ChrX	stalkie_big_nohaplotig	exon	13725312	13725358	95	+	.	Parent=FBgn0041182.2.mrna1;Target=FBgn0041182.2 1 47 +
ChrX	stalkie_big_nohaplotig	exon	13727315	13727723	100	+	.	Parent=FBgn0041182.2.mrna1;Target=FBgn0041182.2 48 456 +
ChrX	stalkie_big_nohaplotig	exon	13727795	13728663	100	+	.	Parent=FBgn0041182.2.mrna1;Target=FBgn0041182.2 457 1325 +
ChrX	stalkie_big_nohaplotig	exon	13728720	13728981	100	+	.	Parent=FBgn0041182.2.mrna1;Target=FBgn0041182.2 1326 1587 +
ChrX	stalkie_big_nohaplotig	exon	13729037	13729301	100	+	.	Parent=FBgn0041182.2.mrna1;Target=FBgn0041182.2 1588 1852 +
ChrX	stalkie_big_nohaplotig	exon	13730223	13730397	100	+	.	Parent=FBgn0041182.2.mrna1;Target=FBgn0041182.2 1853 2027 +
ChrX	stalkie_big_nohaplotig	exon	13730467	13730645	100	+	.	Parent=FBgn0041182.2.mrna1;Target=FBgn0041182.2 2028 2206 +
ChrX	stalkie_big_nohaplotig	exon	13730708	13731240	100	+	.	Parent=FBgn0041182.2.mrna1;Target=FBgn0041182.2 2207 2739 +
ChrX	stalkie_big_nohaplotig	exon	13731303	13732178	99	+	.	Parent=FBgn0041182.2.mrna1;Target=FBgn0041182.2 2740 3615 +
ChrX	stalkie_big_nohaplotig	exon	13732247	13732555	100	+	.	Parent=FBgn0041182.2.mrna1;Target=FBgn0041182.2 3616 3924 +
ChrX	stalkie_big_nohaplotig	exon	13732621	13732806	100	+	.	Parent=FBgn0041182.2.mrna1;Target=FBgn0041182.2 3925 4110 +
ChrX	stalkie_big_nohaplotig	CDS	13725330	13725358	.	+	0	Parent=FBgn0041182.2.mrna1;Target=FBgn0041182.2 19 47 +
ChrX	stalkie_big_nohaplotig	CDS	13727315	13727723	.	+	1	Parent=FBgn0041182.2.mrna1;Target=FBgn0041182.2 48 456 +
ChrX	stalkie_big_nohaplotig	CDS	13727795	13728663	.	+	0	Parent=FBgn0041182.2.mrna1;Target=FBgn0041182.2 457 1325 +
ChrX	stalkie_big_nohaplotig	CDS	13728720	13728981	.	+	1	Parent=FBgn0041182.2.mrna1;Target=FBgn0041182.2 1326 1587 +
ChrX	stalkie_big_nohaplotig	CDS	13729037	13729301	.	+	0	Parent=FBgn0041182.2.mrna1;Target=FBgn0041182.2 1588 1852 +
ChrX	stalkie_big_nohaplotig	CDS	13730223	13730397	.	+	2	Parent=FBgn0041182.2.mrna1;Target=FBgn0041182.2 1853 2027 +
ChrX	stalkie_big_nohaplotig	CDS	13730467	13730645	.	+	1	Parent=FBgn0041182.2.mrna1;Target=FBgn0041182.2 2028 2206 +
ChrX	stalkie_big_nohaplotig	CDS	13730708	13731240	.	+	2	Parent=FBgn0041182.2.mrna1;Target=FBgn0041182.2 2207 2739 +
ChrX	stalkie_big_nohaplotig	CDS	13731303	13732178	.	+	0	Parent=FBgn0041182.2.mrna1;Target=FBgn0041182.2 2740 3615 +
ChrX	stalkie_big_nohaplotig	CDS	13732247	13732555	.	+	0	Parent=FBgn0041182.2.mrna1;Target=FBgn0041182.2 3616 3924 +
ChrX	stalkie_big_nohaplotig	CDS	13732621	13732806	.	+	0	Parent=FBgn0041182.2.mrna1;Target=FBgn0041182.2 3925 4110 +
ChrX	gffcl	locus	13756589	13817314	.	.	.	ID=RLOC_00000794;geneIDs=FBgn0031929.1.path1,FBgn0041182.3.path1,comp153663_c0_seq1.path1,comp159935_c0_seq1.path1,comp162495_c1_seq1.path1;transcripts=FBgn0041182.3.mrna1,comp162495_c1_seq1.mrna1,comp159935_c0_seq1.mrna1,comp153663_c0_seq1.mrna1,FBgn0031929.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13756589	13781429	.	+	.	ID=FBgn0041182.3.mrna1;geneID=FBgn0041182.3.path1;Name=FBgn0041182.3;Dir=sensecoverage=97.4;identity=99.6;matches=4172;mismatches=17;indels=0;unknowns=0;locus=RLOC_00000794
ChrX	stalkie_big_nohaplotig	exon	13756589	13756994	99	+	.	Parent=FBgn0041182.3.mrna1;Target=FBgn0041182.3 111 516 +
ChrX	stalkie_big_nohaplotig	exon	13757071	13757996	99	+	.	Parent=FBgn0041182.3.mrna1;Target=FBgn0041182.3 517 1442 +
ChrX	stalkie_big_nohaplotig	exon	13758049	13758310	100	+	.	Parent=FBgn0041182.3.mrna1;Target=FBgn0041182.3 1443 1704 +
ChrX	stalkie_big_nohaplotig	exon	13759443	13759710	99	+	.	Parent=FBgn0041182.3.mrna1;Target=FBgn0041182.3 1705 1972 +
ChrX	stalkie_big_nohaplotig	exon	13776578	13776758	100	+	.	Parent=FBgn0041182.3.mrna1;Target=FBgn0041182.3 1973 2153 +
ChrX	stalkie_big_nohaplotig	exon	13778992	13779170	100	+	.	Parent=FBgn0041182.3.mrna1;Target=FBgn0041182.3 2154 2332 +
ChrX	stalkie_big_nohaplotig	exon	13779244	13780142	99	+	.	Parent=FBgn0041182.3.mrna1;Target=FBgn0041182.3 2333 3231 +
ChrX	stalkie_big_nohaplotig	exon	13780208	13780717	99	+	.	Parent=FBgn0041182.3.mrna1;Target=FBgn0041182.3 3232 3741 +
ChrX	stalkie_big_nohaplotig	exon	13780872	13781429	98	+	.	Parent=FBgn0041182.3.mrna1;Target=FBgn0041182.3 3742 4299 +
ChrX	stalkie_big_nohaplotig	CDS	13756590	13756994	.	+	0	Parent=FBgn0041182.3.mrna1;Target=FBgn0041182.3 112 516 +
ChrX	stalkie_big_nohaplotig	CDS	13757071	13757996	.	+	0	Parent=FBgn0041182.3.mrna1;Target=FBgn0041182.3 517 1442 +
ChrX	stalkie_big_nohaplotig	CDS	13758049	13758310	.	+	1	Parent=FBgn0041182.3.mrna1;Target=FBgn0041182.3 1443 1704 +
ChrX	stalkie_big_nohaplotig	CDS	13759443	13759710	.	+	0	Parent=FBgn0041182.3.mrna1;Target=FBgn0041182.3 1705 1972 +
ChrX	stalkie_big_nohaplotig	CDS	13776578	13776758	.	+	2	Parent=FBgn0041182.3.mrna1;Target=FBgn0041182.3 1973 2153 +
ChrX	stalkie_big_nohaplotig	CDS	13778992	13779170	.	+	1	Parent=FBgn0041182.3.mrna1;Target=FBgn0041182.3 2154 2332 +
ChrX	stalkie_big_nohaplotig	CDS	13779244	13780142	.	+	2	Parent=FBgn0041182.3.mrna1;Target=FBgn0041182.3 2333 3231 +
ChrX	stalkie_big_nohaplotig	CDS	13780208	13780717	.	+	0	Parent=FBgn0041182.3.mrna1;Target=FBgn0041182.3 3232 3741 +
ChrX	stalkie_big_nohaplotig	CDS	13780872	13781429	.	+	0	Parent=FBgn0041182.3.mrna1;Target=FBgn0041182.3 3742 4299 +
ChrX	stalkie_big_nohaplotig	mRNA	13756589	13817314	.	+	.	ID=comp162495_c1_seq1.mrna1;geneID=comp162495_c1_seq1.path1;Name=comp162495_c1_seq1;Dir=antisensecoverage=64.4;identity=97.5;matches=4530;mismatches=63;indels=52;unknowns=0;locus=RLOC_00000794
ChrX	stalkie_big_nohaplotig	exon	13756589	13756994	99	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 8086 8491 -
ChrX	stalkie_big_nohaplotig	exon	13757071	13757996	99	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 7160 8085 -
ChrX	stalkie_big_nohaplotig	exon	13758049	13758310	100	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 6898 7159 -
ChrX	stalkie_big_nohaplotig	exon	13759443	13759710	99	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 6630 6897 -
ChrX	stalkie_big_nohaplotig	exon	13773898	13774123	99	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 6404 6629 -
ChrX	stalkie_big_nohaplotig	exon	13778992	13779170	100	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 6225 6403 -
ChrX	stalkie_big_nohaplotig	exon	13779244	13780142	99	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 5326 6224 -
ChrX	stalkie_big_nohaplotig	exon	13780208	13780717	99	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 4816 5325 -
ChrX	stalkie_big_nohaplotig	exon	13780872	13781541	98	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 4146 4815 -
ChrX	stalkie_big_nohaplotig	exon	13782349	13782360	100	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 3822 3833 -
ChrX	stalkie_big_nohaplotig	exon	13782396	13782403	100	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 3766 3773 -
ChrX	stalkie_big_nohaplotig	exon	13782446	13782454	100	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 3699 3707 -
ChrX	stalkie_big_nohaplotig	exon	13784926	13784930	100	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 3694 3698 -
ChrX	stalkie_big_nohaplotig	exon	13787955	13787965	100	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 3290 3300 -
ChrX	stalkie_big_nohaplotig	exon	13793982	13794031	46	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 2882 2952 -
ChrX	stalkie_big_nohaplotig	exon	13794396	13794400	100	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 2877 2881 -
ChrX	stalkie_big_nohaplotig	exon	13800872	13800880	100	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 2868 2876 -
ChrX	stalkie_big_nohaplotig	exon	13805659	13805669	100	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 2857 2867 -
ChrX	stalkie_big_nohaplotig	exon	13806940	13806943	75	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 2853 2856 -
ChrX	stalkie_big_nohaplotig	exon	13810191	13810201	90	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 2842 2852 -
ChrX	stalkie_big_nohaplotig	exon	13810203	13810210	100	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 2794 2801 -
ChrX	stalkie_big_nohaplotig	exon	13812252	13812256	100	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 2789 2793 -
ChrX	stalkie_big_nohaplotig	exon	13812600	13812656	45	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 2704 2751 -
ChrX	stalkie_big_nohaplotig	exon	13812968	13812977	100	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 2694 2703 -
ChrX	stalkie_big_nohaplotig	exon	13813215	13813225	90	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 2683 2693 -
ChrX	stalkie_big_nohaplotig	exon	13816735	13816736	100	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 2681 2682 -
ChrX	stalkie_big_nohaplotig	exon	13817108	13817116	100	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 2672 2680 -
ChrX	stalkie_big_nohaplotig	exon	13817276	13817314	41	+	.	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 2655 2671 -
ChrX	stalkie_big_nohaplotig	CDS	13756590	13756994	.	+	0	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 8086 8490 .
ChrX	stalkie_big_nohaplotig	CDS	13757071	13757996	.	+	0	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 7160 8085 .
ChrX	stalkie_big_nohaplotig	CDS	13758049	13758310	.	+	1	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 6898 7159 .
ChrX	stalkie_big_nohaplotig	CDS	13759443	13759710	.	+	0	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 6630 6897 .
ChrX	stalkie_big_nohaplotig	CDS	13773898	13774123	.	+	2	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 6404 6629 .
ChrX	stalkie_big_nohaplotig	CDS	13778992	13779170	.	+	1	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 6225 6403 .
ChrX	stalkie_big_nohaplotig	CDS	13779244	13780142	.	+	2	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 5326 6224 .
ChrX	stalkie_big_nohaplotig	CDS	13780208	13780717	.	+	0	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 4816 5325 .
ChrX	stalkie_big_nohaplotig	CDS	13780872	13781432	.	+	0	Parent=comp162495_c1_seq1.mrna1;Target=comp162495_c1_seq1 4255 4815 .
ChrX	stalkie_big_nohaplotig	mRNA	13771813	13773920	.	-	.	ID=comp159935_c0_seq1.mrna1;geneID=comp159935_c0_seq1.path1;Name=comp159935_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=2096;mismatches=10;indels=2;unknowns=0;Target=comp159935_c0_seq1 2106 1 .;CDS_Target=comp159935_c0_seq1 1175 996 .;locus=RLOC_00000794
ChrX	stalkie_big_nohaplotig	exon	13771813	13773920	99	-	.	Parent=comp159935_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13772745	13772924	.	-	0	Parent=comp159935_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13776736	13779015	.	-	.	ID=comp153663_c0_seq1.mrna1;geneID=comp153663_c0_seq1.path1;Name=comp153663_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=2265;mismatches=14;indels=10;unknowns=0;Target=comp153663_c0_seq1 2288 1 .;CDS_Target=comp153663_c0_seq1 144 1 .;locus=RLOC_00000794
ChrX	stalkie_big_nohaplotig	exon	13776736	13779015	98	-	.	Parent=comp153663_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13778872	13779015	.	-	0	Parent=comp153663_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13786781	13789366	.	+	.	ID=FBgn0031929.1.mrna1;geneID=FBgn0031929.1.path1;Name=FBgn0031929.1;Dir=sensecoverage=100.0;identity=99.1;matches=1284;mismatches=12;indels=0;unknowns=0;locus=RLOC_00000794
ChrX	stalkie_big_nohaplotig	exon	13786781	13786972	98	+	.	Parent=FBgn0031929.1.mrna1;Target=FBgn0031929.1 1 192 +
ChrX	stalkie_big_nohaplotig	exon	13787034	13787170	98	+	.	Parent=FBgn0031929.1.mrna1;Target=FBgn0031929.1 193 329 +
ChrX	stalkie_big_nohaplotig	exon	13787433	13787820	98	+	.	Parent=FBgn0031929.1.mrna1;Target=FBgn0031929.1 330 717 +
ChrX	stalkie_big_nohaplotig	exon	13787887	13788274	99	+	.	Parent=FBgn0031929.1.mrna1;Target=FBgn0031929.1 718 1105 +
ChrX	stalkie_big_nohaplotig	exon	13789176	13789366	99	+	.	Parent=FBgn0031929.1.mrna1;Target=FBgn0031929.1 1106 1296 +
ChrX	stalkie_big_nohaplotig	CDS	13786781	13786972	.	+	0	Parent=FBgn0031929.1.mrna1;Target=FBgn0031929.1 1 192 +
ChrX	stalkie_big_nohaplotig	CDS	13787034	13787170	.	+	0	Parent=FBgn0031929.1.mrna1;Target=FBgn0031929.1 193 329 +
ChrX	stalkie_big_nohaplotig	CDS	13787433	13787820	.	+	1	Parent=FBgn0031929.1.mrna1;Target=FBgn0031929.1 330 717 +
ChrX	stalkie_big_nohaplotig	CDS	13787887	13788274	.	+	0	Parent=FBgn0031929.1.mrna1;Target=FBgn0031929.1 718 1105 +
ChrX	stalkie_big_nohaplotig	CDS	13789176	13789366	.	+	2	Parent=FBgn0031929.1.mrna1;Target=FBgn0031929.1 1106 1296 +
ChrX	gffcl	locus	13760186	13760875	.	+	.	ID=RLOC_00000795;geneIDs=comp149913_c2_seq1.path1;transcripts=comp149913_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13760186	13760875	.	+	.	ID=comp149913_c2_seq1.mrna1;geneID=comp149913_c2_seq1.path1;Name=comp149913_c2_seq1;Dir=indeterminatecoverage=99.3;identity=99.4;matches=686;mismatches=4;indels=0;unknowns=0;Target=comp149913_c2_seq1 695 6 .;CDS_Target=comp149913_c2_seq1 418 224 .;locus=RLOC_00000795
ChrX	stalkie_big_nohaplotig	exon	13760186	13760875	99	+	.	Parent=comp149913_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13760404	13760598	.	+	0	Parent=comp149913_c2_seq1.mrna1
ChrX	gffcl	locus	13762935	13765346	.	+	.	ID=RLOC_00000796;geneIDs=comp153968_c0_seq1.path1;transcripts=comp153968_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13762935	13765346	.	+	.	ID=comp153968_c0_seq1.mrna1;geneID=comp153968_c0_seq1.path1;Name=comp153968_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=2332;mismatches=23;indels=52;unknowns=0;Target=comp153968_c0_seq1 1973 1803 .;locus=RLOC_00000796
ChrX	stalkie_big_nohaplotig	exon	13762935	13763761	93	+	.	Parent=comp153968_c0_seq1.mrna1;Target=comp153968_c0_seq1 793 1 .
ChrX	stalkie_big_nohaplotig	exon	13763780	13765346	98	+	.	Parent=comp153968_c0_seq1.mrna1;Target=comp153968_c0_seq1 2470 896 .
ChrX	stalkie_big_nohaplotig	CDS	13764680	13764850	.	+	0	Parent=comp153968_c0_seq1.mrna1
ChrX	gffcl	locus	13770208	13771691	.	-	.	ID=RLOC_00000797;geneIDs=comp156487_c0_seq1.path1;transcripts=comp156487_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13770208	13771691	.	-	.	ID=comp156487_c0_seq1.mrna1;geneID=comp156487_c0_seq1.path1;Name=comp156487_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1480;mismatches=4;indels=2;unknowns=0;Target=comp156487_c0_seq1 1486 1 .;CDS_Target=comp156487_c0_seq1 143 54 .;locus=RLOC_00000797
ChrX	stalkie_big_nohaplotig	exon	13770208	13771691	99	-	.	Parent=comp156487_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13771550	13771638	.	-	0	Parent=comp156487_c0_seq1.mrna1
ChrX	gffcl	locus	13782523	13784172	.	-	.	ID=RLOC_00000798;geneIDs=FBgn0031930.1.path1;transcripts=FBgn0031930.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13782523	13784172	.	-	.	ID=FBgn0031930.1.mrna1;geneID=FBgn0031930.1.path1;Name=FBgn0031930.1;Dir=sensecoverage=100.0;identity=99.3;matches=1299;mismatches=9;indels=0;unknowns=0;locus=RLOC_00000798
ChrX	stalkie_big_nohaplotig	exon	13782523	13782725	99	-	.	Parent=FBgn0031930.1.mrna1;Target=FBgn0031930.1 1106 1308 +
ChrX	stalkie_big_nohaplotig	exon	13782816	13783203	99	-	.	Parent=FBgn0031930.1.mrna1;Target=FBgn0031930.1 718 1105 +
ChrX	stalkie_big_nohaplotig	exon	13783278	13783671	99	-	.	Parent=FBgn0031930.1.mrna1;Target=FBgn0031930.1 324 717 +
ChrX	stalkie_big_nohaplotig	exon	13783790	13783917	99	-	.	Parent=FBgn0031930.1.mrna1;Target=FBgn0031930.1 196 323 +
ChrX	stalkie_big_nohaplotig	exon	13783978	13784172	99	-	.	Parent=FBgn0031930.1.mrna1;Target=FBgn0031930.1 1 195 +
ChrX	stalkie_big_nohaplotig	CDS	13782523	13782725	.	-	2	Parent=FBgn0031930.1.mrna1;Target=FBgn0031930.1 1106 1308 +
ChrX	stalkie_big_nohaplotig	CDS	13782816	13783203	.	-	0	Parent=FBgn0031930.1.mrna1;Target=FBgn0031930.1 718 1105 +
ChrX	stalkie_big_nohaplotig	CDS	13783278	13783671	.	-	1	Parent=FBgn0031930.1.mrna1;Target=FBgn0031930.1 324 717 +
ChrX	stalkie_big_nohaplotig	CDS	13783790	13783917	.	-	0	Parent=FBgn0031930.1.mrna1;Target=FBgn0031930.1 196 323 +
ChrX	stalkie_big_nohaplotig	CDS	13783978	13784172	.	-	0	Parent=FBgn0031930.1.mrna1;Target=FBgn0031930.1 1 195 +
ChrX	gffcl	locus	13789434	13804270	.	-	.	ID=RLOC_00000799;geneIDs=FBgn0040299.1.path1;transcripts=FBgn0040299.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13789434	13804270	.	-	.	ID=FBgn0040299.1.mrna1;geneID=FBgn0040299.1.path1;Name=FBgn0040299.1;Dir=sensecoverage=99.5;identity=99.8;matches=6360;mismatches=15;indels=0;unknowns=0;locus=RLOC_00000799
ChrX	stalkie_big_nohaplotig	exon	13789434	13789616	98	-	.	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 6223 6405 +
ChrX	stalkie_big_nohaplotig	exon	13789672	13790403	99	-	.	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 5491 6222 +
ChrX	stalkie_big_nohaplotig	exon	13790456	13790821	100	-	.	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 5125 5490 +
ChrX	stalkie_big_nohaplotig	exon	13790886	13791887	99	-	.	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 4123 5124 +
ChrX	stalkie_big_nohaplotig	exon	13791948	13792058	100	-	.	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 4012 4122 +
ChrX	stalkie_big_nohaplotig	exon	13792863	13793264	99	-	.	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 3610 4011 +
ChrX	stalkie_big_nohaplotig	exon	13793339	13793543	100	-	.	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 3405 3609 +
ChrX	stalkie_big_nohaplotig	exon	13793708	13794093	99	-	.	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 3019 3404 +
ChrX	stalkie_big_nohaplotig	exon	13794162	13794362	100	-	.	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 2818 3018 +
ChrX	stalkie_big_nohaplotig	exon	13799540	13800424	100	-	.	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 1933 2817 +
ChrX	stalkie_big_nohaplotig	exon	13802153	13802526	100	-	.	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 1559 1932 +
ChrX	stalkie_big_nohaplotig	exon	13802602	13802743	100	-	.	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 1417 1558 +
ChrX	stalkie_big_nohaplotig	exon	13802815	13803936	99	-	.	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 295 1416 +
ChrX	stalkie_big_nohaplotig	exon	13804007	13804270	100	-	.	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 31 294 +
ChrX	stalkie_big_nohaplotig	CDS	13789434	13789616	.	-	0	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 6223 6405 +
ChrX	stalkie_big_nohaplotig	CDS	13789672	13790403	.	-	0	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 5491 6222 +
ChrX	stalkie_big_nohaplotig	CDS	13790456	13790821	.	-	0	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 5125 5490 +
ChrX	stalkie_big_nohaplotig	CDS	13790886	13791887	.	-	0	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 4123 5124 +
ChrX	stalkie_big_nohaplotig	CDS	13791948	13792058	.	-	0	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 4012 4122 +
ChrX	stalkie_big_nohaplotig	CDS	13792863	13793264	.	-	0	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 3610 4011 +
ChrX	stalkie_big_nohaplotig	CDS	13793339	13793543	.	-	1	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 3405 3609 +
ChrX	stalkie_big_nohaplotig	CDS	13793708	13794093	.	-	0	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 3019 3404 +
ChrX	stalkie_big_nohaplotig	CDS	13794162	13794362	.	-	0	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 2818 3018 +
ChrX	stalkie_big_nohaplotig	CDS	13799540	13800424	.	-	0	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 1933 2817 +
ChrX	stalkie_big_nohaplotig	CDS	13802153	13802526	.	-	2	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 1559 1932 +
ChrX	stalkie_big_nohaplotig	CDS	13802602	13802743	.	-	0	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 1417 1558 +
ChrX	stalkie_big_nohaplotig	CDS	13802815	13803936	.	-	0	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 295 1416 +
ChrX	stalkie_big_nohaplotig	CDS	13804007	13804270	.	-	0	Parent=FBgn0040299.1.mrna1;Target=FBgn0040299.1 31 294 +
ChrX	gffcl	locus	13794339	13795581	.	+	.	ID=RLOC_00000800;geneIDs=comp146148_c0_seq1.path1;transcripts=comp146148_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13794339	13795581	.	+	.	ID=comp146148_c0_seq1.mrna1;geneID=comp146148_c0_seq1.path1;Name=comp146148_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.1;matches=851;mismatches=8;indels=0;unknowns=0;locus=RLOC_00000800
ChrX	stalkie_big_nohaplotig	exon	13794339	13794362	100	+	.	Parent=comp146148_c0_seq1.mrna1;Target=comp146148_c0_seq1 24 1 .
ChrX	stalkie_big_nohaplotig	exon	13794525	13794561	100	+	.	Parent=comp146148_c0_seq1.mrna1;Target=comp146148_c0_seq1 61 25 .
ChrX	stalkie_big_nohaplotig	exon	13794631	13795055	99	+	.	Parent=comp146148_c0_seq1.mrna1;Target=comp146148_c0_seq1 486 62 .
ChrX	stalkie_big_nohaplotig	exon	13795209	13795581	98	+	.	Parent=comp146148_c0_seq1.mrna1;Target=comp146148_c0_seq1 859 487 .
ChrX	stalkie_big_nohaplotig	CDS	13794340	13794362	.	+	0	Parent=comp146148_c0_seq1.mrna1;Target=comp146148_c0_seq1 24 2 .
ChrX	stalkie_big_nohaplotig	CDS	13794525	13794561	.	+	1	Parent=comp146148_c0_seq1.mrna1;Target=comp146148_c0_seq1 61 25 .
ChrX	stalkie_big_nohaplotig	CDS	13794631	13794753	.	+	0	Parent=comp146148_c0_seq1.mrna1;Target=comp146148_c0_seq1 184 62 .
ChrX	gffcl	locus	13840540	13841099	.	-	.	ID=RLOC_00000801;geneIDs=comp144398_c0_seq1.path1;transcripts=comp144398_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13840540	13841099	.	-	.	ID=comp144398_c0_seq1.mrna1;geneID=comp144398_c0_seq1.path1;Name=comp144398_c0_seq1;Dir=sensecoverage=99.8;identity=99.5;matches=420;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000801
ChrX	stalkie_big_nohaplotig	exon	13840540	13840701	100	-	.	Parent=comp144398_c0_seq1.mrna1;Target=comp144398_c0_seq1 261 422 +
ChrX	stalkie_big_nohaplotig	exon	13840766	13840884	99	-	.	Parent=comp144398_c0_seq1.mrna1;Target=comp144398_c0_seq1 142 260 +
ChrX	stalkie_big_nohaplotig	exon	13840959	13841099	99	-	.	Parent=comp144398_c0_seq1.mrna1;Target=comp144398_c0_seq1 1 141 +
ChrX	stalkie_big_nohaplotig	CDS	13840552	13840701	.	-	0	Parent=comp144398_c0_seq1.mrna1;Target=comp144398_c0_seq1 261 410 +
ChrX	stalkie_big_nohaplotig	CDS	13840766	13840884	.	-	2	Parent=comp144398_c0_seq1.mrna1;Target=comp144398_c0_seq1 142 260 +
ChrX	stalkie_big_nohaplotig	CDS	13840959	13840968	.	-	0	Parent=comp144398_c0_seq1.mrna1;Target=comp144398_c0_seq1 132 141 +
ChrX	gffcl	locus	13931767	13956830	.	+	.	ID=RLOC_00000802;geneIDs=FBgn0264087.1.path1;transcripts=FBgn0264087.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13931767	13956830	.	+	.	ID=FBgn0264087.1.mrna1;geneID=FBgn0264087.1.path1;Name=FBgn0264087.1;Dir=sensecoverage=100.0;identity=99.8;matches=1878;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000802
ChrX	stalkie_big_nohaplotig	exon	13931767	13932221	100	+	.	Parent=FBgn0264087.1.mrna1;Target=FBgn0264087.1 1 455 +
ChrX	stalkie_big_nohaplotig	exon	13934615	13934734	100	+	.	Parent=FBgn0264087.1.mrna1;Target=FBgn0264087.1 456 575 +
ChrX	stalkie_big_nohaplotig	exon	13934996	13935163	100	+	.	Parent=FBgn0264087.1.mrna1;Target=FBgn0264087.1 576 743 +
ChrX	stalkie_big_nohaplotig	exon	13944356	13944566	100	+	.	Parent=FBgn0264087.1.mrna1;Target=FBgn0264087.1 744 954 +
ChrX	stalkie_big_nohaplotig	exon	13944678	13944914	99	+	.	Parent=FBgn0264087.1.mrna1;Target=FBgn0264087.1 955 1191 +
ChrX	stalkie_big_nohaplotig	exon	13945884	13946065	100	+	.	Parent=FBgn0264087.1.mrna1;Target=FBgn0264087.1 1192 1373 +
ChrX	stalkie_big_nohaplotig	exon	13950029	13950230	99	+	.	Parent=FBgn0264087.1.mrna1;Target=FBgn0264087.1 1374 1575 +
ChrX	stalkie_big_nohaplotig	exon	13950758	13950883	100	+	.	Parent=FBgn0264087.1.mrna1;Target=FBgn0264087.1 1576 1701 +
ChrX	stalkie_big_nohaplotig	exon	13952857	13952999	99	+	.	Parent=FBgn0264087.1.mrna1;Target=FBgn0264087.1 1702 1844 +
ChrX	stalkie_big_nohaplotig	exon	13956794	13956830	100	+	.	Parent=FBgn0264087.1.mrna1;Target=FBgn0264087.1 1845 1881 +
ChrX	stalkie_big_nohaplotig	CDS	13931767	13932221	.	+	0	Parent=FBgn0264087.1.mrna1;Target=FBgn0264087.1 1 455 +
ChrX	stalkie_big_nohaplotig	CDS	13934615	13934734	.	+	1	Parent=FBgn0264087.1.mrna1;Target=FBgn0264087.1 456 575 +
ChrX	stalkie_big_nohaplotig	CDS	13934996	13935163	.	+	1	Parent=FBgn0264087.1.mrna1;Target=FBgn0264087.1 576 743 +
ChrX	stalkie_big_nohaplotig	CDS	13944356	13944566	.	+	1	Parent=FBgn0264087.1.mrna1;Target=FBgn0264087.1 744 954 +
ChrX	stalkie_big_nohaplotig	CDS	13944678	13944914	.	+	0	Parent=FBgn0264087.1.mrna1;Target=FBgn0264087.1 955 1191 +
ChrX	stalkie_big_nohaplotig	CDS	13945884	13946065	.	+	0	Parent=FBgn0264087.1.mrna1;Target=FBgn0264087.1 1192 1373 +
ChrX	stalkie_big_nohaplotig	CDS	13950029	13950230	.	+	1	Parent=FBgn0264087.1.mrna1;Target=FBgn0264087.1 1374 1575 +
ChrX	stalkie_big_nohaplotig	CDS	13950758	13950883	.	+	0	Parent=FBgn0264087.1.mrna1;Target=FBgn0264087.1 1576 1701 +
ChrX	stalkie_big_nohaplotig	CDS	13952857	13952999	.	+	0	Parent=FBgn0264087.1.mrna1;Target=FBgn0264087.1 1702 1844 +
ChrX	stalkie_big_nohaplotig	CDS	13956794	13956830	.	+	1	Parent=FBgn0264087.1.mrna1;Target=FBgn0264087.1 1845 1881 +
ChrX	gffcl	locus	13942887	13943915	.	+	.	ID=RLOC_00000803;geneIDs=comp149343_c0_seq1.path1;transcripts=comp149343_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13942887	13943915	.	+	.	ID=comp149343_c0_seq1.mrna1;geneID=comp149343_c0_seq1.path1;Name=comp149343_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1025;mismatches=3;indels=1;unknowns=0;Target=comp149343_c0_seq1 1028 1 .;CDS_Target=comp149343_c0_seq1 449 369 .;locus=RLOC_00000803
ChrX	stalkie_big_nohaplotig	exon	13942887	13943915	99	+	.	Parent=comp149343_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13943256	13943336	.	+	0	Parent=comp149343_c0_seq1.mrna1
ChrX	gffcl	locus	13965658	13968839	.	+	.	ID=RLOC_00000804;geneIDs=comp161039_c1_seq1.path1;transcripts=comp161039_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13965658	13968839	.	+	.	ID=comp161039_c1_seq1.mrna1;geneID=comp161039_c1_seq1.path1;Name=comp161039_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=3174;mismatches=8;indels=2;unknowns=0;Target=comp161039_c1_seq1 3184 1 .;CDS_Target=comp161039_c1_seq1 2616 1 .;locus=RLOC_00000804
ChrX	stalkie_big_nohaplotig	exon	13965658	13968839	99	+	.	Parent=comp161039_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13965658	13968273	.	+	0	Parent=comp161039_c1_seq1.mrna1
ChrX	gffcl	locus	13969241	13970191	.	-	.	ID=RLOC_00000805;geneIDs=comp137661_c0_seq1.path1;transcripts=comp137661_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13969241	13970191	.	-	.	ID=comp137661_c0_seq1.mrna1;geneID=comp137661_c0_seq1.path1;Name=comp137661_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=945;mismatches=6;indels=0;unknowns=0;Target=comp137661_c0_seq1 951 1 .;CDS_Target=comp137661_c0_seq1 406 290 .;locus=RLOC_00000805
ChrX	stalkie_big_nohaplotig	exon	13969241	13970191	99	-	.	Parent=comp137661_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13969786	13969902	.	-	0	Parent=comp137661_c0_seq1.mrna1
ChrX	gffcl	locus	13971023	13971609	.	.	.	ID=RLOC_00000806;geneIDs=comp96669_c0_seq1.path1,comp142674_c0_seq1.path1;transcripts=comp142674_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13971023	13971368	.	+	.	ID=comp142674_c0_seq1.mrna1;geneID=comp142674_c0_seq1.path1;Name=comp142674_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.1;matches=330;mismatches=0;indels=17;unknowns=0;Target=comp142674_c0_seq1 331 1 .;CDS_Target=comp142674_c0_seq1 144 1 .;locus=RLOC_00000806
ChrX	stalkie_big_nohaplotig	exon	13971023	13971368	95	+	.	Parent=comp142674_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13971023	13971166	.	+	0	Parent=comp142674_c0_seq1.mrna1
ChrX	gffcl	locus	13979328	13984994	.	+	.	ID=RLOC_00000807;geneIDs=FBgn0031456.1.path1;transcripts=FBgn0031456.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13979328	13984994	.	+	.	ID=FBgn0031456.1.mrna1;geneID=FBgn0031456.1.path1;Name=FBgn0031456.1;Dir=sensecoverage=100.0;identity=99.9;matches=2800;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000807
ChrX	stalkie_big_nohaplotig	exon	13979328	13979450	100	+	.	Parent=FBgn0031456.1.mrna1;Target=FBgn0031456.1 1 123 +
ChrX	stalkie_big_nohaplotig	exon	13979528	13980610	99	+	.	Parent=FBgn0031456.1.mrna1;Target=FBgn0031456.1 124 1206 +
ChrX	stalkie_big_nohaplotig	exon	13981964	13982130	100	+	.	Parent=FBgn0031456.1.mrna1;Target=FBgn0031456.1 1207 1373 +
ChrX	stalkie_big_nohaplotig	exon	13983116	13983936	100	+	.	Parent=FBgn0031456.1.mrna1;Target=FBgn0031456.1 1374 2194 +
ChrX	stalkie_big_nohaplotig	exon	13984310	13984859	99	+	.	Parent=FBgn0031456.1.mrna1;Target=FBgn0031456.1 2195 2744 +
ChrX	stalkie_big_nohaplotig	exon	13984937	13984994	100	+	.	Parent=FBgn0031456.1.mrna1;Target=FBgn0031456.1 2745 2802 +
ChrX	stalkie_big_nohaplotig	CDS	13979328	13979450	.	+	0	Parent=FBgn0031456.1.mrna1;Target=FBgn0031456.1 1 123 +
ChrX	stalkie_big_nohaplotig	CDS	13979528	13980610	.	+	0	Parent=FBgn0031456.1.mrna1;Target=FBgn0031456.1 124 1206 +
ChrX	stalkie_big_nohaplotig	CDS	13981964	13982130	.	+	0	Parent=FBgn0031456.1.mrna1;Target=FBgn0031456.1 1207 1373 +
ChrX	stalkie_big_nohaplotig	CDS	13983116	13983936	.	+	1	Parent=FBgn0031456.1.mrna1;Target=FBgn0031456.1 1374 2194 +
ChrX	stalkie_big_nohaplotig	CDS	13984310	13984859	.	+	2	Parent=FBgn0031456.1.mrna1;Target=FBgn0031456.1 2195 2744 +
ChrX	stalkie_big_nohaplotig	CDS	13984937	13984994	.	+	1	Parent=FBgn0031456.1.mrna1;Target=FBgn0031456.1 2745 2802 +
ChrX	gffcl	locus	13985785	13986566	.	-	.	ID=RLOC_00000808;geneIDs=comp117413_c0_seq1.path1;transcripts=comp117413_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13985785	13986566	.	-	.	ID=comp117413_c0_seq1.mrna1;geneID=comp117413_c0_seq1.path1;Name=comp117413_c0_seq1;Dir=indeterminatecoverage=97.4;identity=99.9;matches=781;mismatches=1;indels=0;unknowns=0;Target=comp117413_c0_seq1 782 1 .;CDS_Target=comp117413_c0_seq1 676 614 .;locus=RLOC_00000808
ChrX	stalkie_big_nohaplotig	exon	13985785	13986566	99	-	.	Parent=comp117413_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	13985891	13985953	.	-	0	Parent=comp117413_c0_seq1.mrna1
ChrX	gffcl	locus	13989748	13990244	.	+	.	ID=RLOC_00000809;geneIDs=FBgn0028398.1.path1;transcripts=FBgn0028398.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13989748	13990244	.	+	.	ID=FBgn0028398.1.mrna1;geneID=FBgn0028398.1.path1;Name=FBgn0028398.1;Dir=sensecoverage=100.0;identity=100.0;matches=420;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000809
ChrX	stalkie_big_nohaplotig	exon	13989748	13990062	100	+	.	Parent=FBgn0028398.1.mrna1;Target=FBgn0028398.1 1 315 +
ChrX	stalkie_big_nohaplotig	exon	13990140	13990244	100	+	.	Parent=FBgn0028398.1.mrna1;Target=FBgn0028398.1 316 420 +
ChrX	stalkie_big_nohaplotig	CDS	13989748	13990062	.	+	0	Parent=FBgn0028398.1.mrna1;Target=FBgn0028398.1 1 315 +
ChrX	stalkie_big_nohaplotig	CDS	13990140	13990244	.	+	0	Parent=FBgn0028398.1.mrna1;Target=FBgn0028398.1 316 420 +
ChrX	gffcl	locus	13994972	14000393	.	+	.	ID=RLOC_00000810;geneIDs=FBgn0027509.1.path1;transcripts=FBgn0027509.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	13994972	14000393	.	+	.	ID=FBgn0027509.1.mrna1;geneID=FBgn0027509.1.path1;Name=FBgn0027509.1;Dir=sensecoverage=100.0;identity=99.8;matches=3642;mismatches=9;indels=0;unknowns=0;locus=RLOC_00000810
ChrX	stalkie_big_nohaplotig	exon	13994972	13995174	99	+	.	Parent=FBgn0027509.1.mrna1;Target=FBgn0027509.1 1 203 +
ChrX	stalkie_big_nohaplotig	exon	13995314	13996104	99	+	.	Parent=FBgn0027509.1.mrna1;Target=FBgn0027509.1 204 994 +
ChrX	stalkie_big_nohaplotig	exon	13996166	13997746	99	+	.	Parent=FBgn0027509.1.mrna1;Target=FBgn0027509.1 995 2575 +
ChrX	stalkie_big_nohaplotig	exon	13997812	13997934	100	+	.	Parent=FBgn0027509.1.mrna1;Target=FBgn0027509.1 2576 2698 +
ChrX	stalkie_big_nohaplotig	exon	13998005	13998348	100	+	.	Parent=FBgn0027509.1.mrna1;Target=FBgn0027509.1 2699 3042 +
ChrX	stalkie_big_nohaplotig	exon	13999147	13999306	100	+	.	Parent=FBgn0027509.1.mrna1;Target=FBgn0027509.1 3043 3202 +
ChrX	stalkie_big_nohaplotig	exon	13999945	14000393	100	+	.	Parent=FBgn0027509.1.mrna1;Target=FBgn0027509.1 3203 3651 +
ChrX	stalkie_big_nohaplotig	CDS	13994972	13995174	.	+	0	Parent=FBgn0027509.1.mrna1;Target=FBgn0027509.1 1 203 +
ChrX	stalkie_big_nohaplotig	CDS	13995314	13996104	.	+	1	Parent=FBgn0027509.1.mrna1;Target=FBgn0027509.1 204 994 +
ChrX	stalkie_big_nohaplotig	CDS	13996166	13997746	.	+	2	Parent=FBgn0027509.1.mrna1;Target=FBgn0027509.1 995 2575 +
ChrX	stalkie_big_nohaplotig	CDS	13997812	13997934	.	+	2	Parent=FBgn0027509.1.mrna1;Target=FBgn0027509.1 2576 2698 +
ChrX	stalkie_big_nohaplotig	CDS	13998005	13998348	.	+	2	Parent=FBgn0027509.1.mrna1;Target=FBgn0027509.1 2699 3042 +
ChrX	stalkie_big_nohaplotig	CDS	13999147	13999306	.	+	0	Parent=FBgn0027509.1.mrna1;Target=FBgn0027509.1 3043 3202 +
ChrX	stalkie_big_nohaplotig	CDS	13999945	14000393	.	+	2	Parent=FBgn0027509.1.mrna1;Target=FBgn0027509.1 3203 3651 +
ChrX	gffcl	locus	14001036	14001651	.	-	.	ID=RLOC_00000811;geneIDs=comp155678_c0_seq1.path1;transcripts=comp155678_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14001036	14001651	.	-	.	ID=comp155678_c0_seq1.mrna1;geneID=comp155678_c0_seq1.path1;Name=comp155678_c0_seq1;Dir=indeterminatecoverage=96.6;identity=99.5;matches=613;mismatches=3;indels=0;unknowns=0;Target=comp155678_c0_seq1 616 1 .;CDS_Target=comp155678_c0_seq1 14 3 .;locus=RLOC_00000811
ChrX	stalkie_big_nohaplotig	exon	14001036	14001651	99	-	.	Parent=comp155678_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14001638	14001649	.	-	0	Parent=comp155678_c0_seq1.mrna1
ChrX	gffcl	locus	14003954	14006349	.	-	.	ID=RLOC_00000812;geneIDs=comp161109_c1_seq1.path1;transcripts=comp161109_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14003954	14006349	.	-	.	ID=comp161109_c1_seq1.mrna1;geneID=comp161109_c1_seq1.path1;Name=comp161109_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=2373;mismatches=13;indels=13;unknowns=0;Target=comp161109_c1_seq1 2389 1 .;CDS_Target=comp161109_c1_seq1 655 497 .;locus=RLOC_00000812
ChrX	stalkie_big_nohaplotig	exon	14003954	14006349	98	-	.	Parent=comp161109_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14005698	14005856	.	-	0	Parent=comp161109_c1_seq1.mrna1
ChrX	gffcl	locus	14016697	14060857	.	-	.	ID=RLOC_00000814;geneIDs=comp135040_c0_seq1.path1;transcripts=comp135040_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14016697	14060857	.	-	.	ID=comp135040_c0_seq1.mrna1;geneID=comp135040_c0_seq1.path1;Name=comp135040_c0_seq1;Dir=indeterminatecoverage=64.9;identity=99.5;matches=787;mismatches=4;indels=0;unknowns=0;Target=comp135040_c0_seq1 703 452 .;locus=RLOC_00000814
ChrX	stalkie_big_nohaplotig	exon	14016697	14016702	100	-	.	Parent=comp135040_c0_seq1.mrna1;Target=comp135040_c0_seq1 791 786 .
ChrX	stalkie_big_nohaplotig	exon	14025174	14025183	90	-	.	Parent=comp135040_c0_seq1.mrna1;Target=comp135040_c0_seq1 785 776 .
ChrX	stalkie_big_nohaplotig	exon	14029575	14029581	100	-	.	Parent=comp135040_c0_seq1.mrna1;Target=comp135040_c0_seq1 775 769 .
ChrX	stalkie_big_nohaplotig	exon	14045588	14045593	100	-	.	Parent=comp135040_c0_seq1.mrna1;Target=comp135040_c0_seq1 768 763 .
ChrX	stalkie_big_nohaplotig	exon	14060096	14060857	99	-	.	Parent=comp135040_c0_seq1.mrna1;Target=comp135040_c0_seq1 762 1 .
ChrX	stalkie_big_nohaplotig	CDS	14060155	14060406	.	-	0	Parent=comp135040_c0_seq1.mrna1
ChrX	gffcl	locus	14048562	14049370	.	-	.	ID=RLOC_00000815;geneIDs=comp135534_c0_seq1.path1;transcripts=comp135534_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14048562	14049370	.	-	.	ID=comp135534_c0_seq1.mrna1;geneID=comp135534_c0_seq1.path1;Name=comp135534_c0_seq1;Dir=indeterminatecoverage=97.1;identity=99.5;matches=805;mismatches=4;indels=0;unknowns=0;Target=comp135534_c0_seq1 821 13 .;CDS_Target=comp135534_c0_seq1 673 194 .;locus=RLOC_00000815
ChrX	stalkie_big_nohaplotig	exon	14048562	14049370	99	-	.	Parent=comp135534_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14048710	14049189	.	-	0	Parent=comp135534_c0_seq1.mrna1
ChrX	gffcl	locus	14055416	14055916	.	+	.	ID=RLOC_00000816;geneIDs=FBgn0000253.19.path1;transcripts=FBgn0000253.19.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14055416	14055916	.	+	.	ID=FBgn0000253.19.mrna1;geneID=FBgn0000253.19.path1;Name=FBgn0000253.19;Dir=indeterminatecoverage=100.0;identity=99.6;matches=499;mismatches=2;indels=0;unknowns=0;Target=FBgn0000253.19 501 1 .;locus=RLOC_00000816
ChrX	stalkie_big_nohaplotig	exon	14055416	14055916	99	+	.	Parent=FBgn0000253.19.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14055416	14055916	.	+	0	Parent=FBgn0000253.19.mrna1
ChrX	gffcl	locus	14112255	14167777	.	+	.	ID=RLOC_00000817;geneIDs=comp147130_c0_seq1.path1;transcripts=comp147130_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14112255	14167777	.	+	.	ID=comp147130_c0_seq1.mrna1;geneID=comp147130_c0_seq1.path1;Name=comp147130_c0_seq1;Dir=sensecoverage=99.7;identity=99.9;matches=787;mismatches=1;indels=0;unknowns=0;Target=comp147130_c0_seq1 3 236 +;locus=RLOC_00000817
ChrX	stalkie_big_nohaplotig	exon	14112255	14112807	100	+	.	Parent=comp147130_c0_seq1.mrna1;Target=comp147130_c0_seq1 1 553 +
ChrX	stalkie_big_nohaplotig	exon	14167543	14167777	99	+	.	Parent=comp147130_c0_seq1.mrna1;Target=comp147130_c0_seq1 554 788 +
ChrX	stalkie_big_nohaplotig	CDS	14112257	14112490	.	+	0	Parent=comp147130_c0_seq1.mrna1
ChrX	gffcl	locus	14182252	14202457	.	+	.	ID=RLOC_00000818;geneIDs=FBgn0085370.1.path1,comp163690_c0_seq1.path1;transcripts=FBgn0085370.1.mrna1,comp163690_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14182252	14202451	.	+	.	ID=FBgn0085370.1.mrna1;geneID=FBgn0085370.1.path1;Name=FBgn0085370.1;Dir=sensecoverage=57.5;identity=99.9;matches=2864;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000818
ChrX	stalkie_big_nohaplotig	exon	14182252	14182368	100	+	.	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 1 117 +
ChrX	stalkie_big_nohaplotig	exon	14182765	14182904	100	+	.	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 118 257 +
ChrX	stalkie_big_nohaplotig	exon	14187485	14187635	100	+	.	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 258 408 +
ChrX	stalkie_big_nohaplotig	exon	14192118	14192273	100	+	.	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 409 564 +
ChrX	stalkie_big_nohaplotig	exon	14192991	14193353	99	+	.	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 565 927 +
ChrX	stalkie_big_nohaplotig	exon	14193431	14193589	100	+	.	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 928 1086 +
ChrX	stalkie_big_nohaplotig	exon	14193671	14193847	100	+	.	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 1087 1263 +
ChrX	stalkie_big_nohaplotig	exon	14199845	14199931	100	+	.	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 1264 1350 +
ChrX	stalkie_big_nohaplotig	exon	14199993	14200160	100	+	.	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 1351 1518 +
ChrX	stalkie_big_nohaplotig	exon	14200361	14200470	100	+	.	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 1519 1628 +
ChrX	stalkie_big_nohaplotig	exon	14200532	14200720	100	+	.	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 1629 1817 +
ChrX	stalkie_big_nohaplotig	exon	14200796	14201015	99	+	.	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 1818 2037 +
ChrX	stalkie_big_nohaplotig	exon	14201084	14201167	100	+	.	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 2038 2121 +
ChrX	stalkie_big_nohaplotig	exon	14201706	14202451	99	+	.	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 2122 2867 +
ChrX	stalkie_big_nohaplotig	CDS	14182252	14182368	.	+	0	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 1 117 +
ChrX	stalkie_big_nohaplotig	CDS	14182765	14182904	.	+	0	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 118 257 +
ChrX	stalkie_big_nohaplotig	CDS	14187485	14187635	.	+	1	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 258 408 +
ChrX	stalkie_big_nohaplotig	CDS	14192118	14192273	.	+	0	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 409 564 +
ChrX	stalkie_big_nohaplotig	CDS	14192991	14193353	.	+	0	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 565 927 +
ChrX	stalkie_big_nohaplotig	CDS	14193431	14193589	.	+	0	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 928 1086 +
ChrX	stalkie_big_nohaplotig	CDS	14193671	14193847	.	+	0	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 1087 1263 +
ChrX	stalkie_big_nohaplotig	CDS	14199845	14199931	.	+	0	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 1264 1350 +
ChrX	stalkie_big_nohaplotig	CDS	14199993	14200160	.	+	0	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 1351 1518 +
ChrX	stalkie_big_nohaplotig	CDS	14200361	14200470	.	+	0	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 1519 1628 +
ChrX	stalkie_big_nohaplotig	CDS	14200532	14200720	.	+	1	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 1629 1817 +
ChrX	stalkie_big_nohaplotig	CDS	14200796	14201015	.	+	1	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 1818 2037 +
ChrX	stalkie_big_nohaplotig	CDS	14201084	14201167	.	+	0	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 2038 2121 +
ChrX	stalkie_big_nohaplotig	CDS	14201706	14202449	.	+	0	Parent=FBgn0085370.1.mrna1;Target=FBgn0085370.1 2122 2865 +
ChrX	stalkie_big_nohaplotig	mRNA	14182252	14202457	.	+	.	ID=comp163690_c0_seq1.mrna1;geneID=comp163690_c0_seq1.path1;Name=comp163690_c0_seq1;Dir=antisensecoverage=57.7;identity=99.9;matches=2887;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000818
ChrX	stalkie_big_nohaplotig	exon	14182252	14182368	100	+	.	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 4892 5008 -
ChrX	stalkie_big_nohaplotig	exon	14182765	14182904	100	+	.	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 4752 4891 -
ChrX	stalkie_big_nohaplotig	exon	14187485	14187635	100	+	.	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 4601 4751 -
ChrX	stalkie_big_nohaplotig	exon	14192118	14192273	100	+	.	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 4445 4600 -
ChrX	stalkie_big_nohaplotig	exon	14192991	14193353	99	+	.	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 4082 4444 -
ChrX	stalkie_big_nohaplotig	exon	14193431	14193589	100	+	.	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 3923 4081 -
ChrX	stalkie_big_nohaplotig	exon	14193671	14193847	100	+	.	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 3746 3922 -
ChrX	stalkie_big_nohaplotig	exon	14199845	14199931	100	+	.	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 3659 3745 -
ChrX	stalkie_big_nohaplotig	exon	14199993	14200160	100	+	.	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 3491 3658 -
ChrX	stalkie_big_nohaplotig	exon	14200343	14200470	100	+	.	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 3363 3490 -
ChrX	stalkie_big_nohaplotig	exon	14200532	14200720	100	+	.	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 3174 3362 -
ChrX	stalkie_big_nohaplotig	exon	14200796	14201015	99	+	.	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 2954 3173 -
ChrX	stalkie_big_nohaplotig	exon	14201084	14201167	100	+	.	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 2870 2953 -
ChrX	stalkie_big_nohaplotig	exon	14201706	14202457	99	+	.	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 2118 2869 -
ChrX	stalkie_big_nohaplotig	CDS	14182252	14182368	.	+	0	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 4892 5008 .
ChrX	stalkie_big_nohaplotig	CDS	14182765	14182904	.	+	0	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 4752 4891 .
ChrX	stalkie_big_nohaplotig	CDS	14187485	14187635	.	+	1	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 4601 4751 .
ChrX	stalkie_big_nohaplotig	CDS	14192118	14192273	.	+	0	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 4445 4600 .
ChrX	stalkie_big_nohaplotig	CDS	14192991	14193353	.	+	0	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 4082 4444 .
ChrX	stalkie_big_nohaplotig	CDS	14193431	14193589	.	+	0	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 3923 4081 .
ChrX	stalkie_big_nohaplotig	CDS	14193671	14193847	.	+	0	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 3746 3922 .
ChrX	stalkie_big_nohaplotig	CDS	14199845	14199931	.	+	0	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 3659 3745 .
ChrX	stalkie_big_nohaplotig	CDS	14199993	14200160	.	+	0	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 3491 3658 .
ChrX	stalkie_big_nohaplotig	CDS	14200343	14200470	.	+	0	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 3363 3490 .
ChrX	stalkie_big_nohaplotig	CDS	14200532	14200720	.	+	1	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 3174 3362 .
ChrX	stalkie_big_nohaplotig	CDS	14200796	14201015	.	+	1	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 2954 3173 .
ChrX	stalkie_big_nohaplotig	CDS	14201084	14201167	.	+	0	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 2870 2953 .
ChrX	stalkie_big_nohaplotig	CDS	14201706	14202455	.	+	0	Parent=comp163690_c0_seq1.mrna1;Target=comp163690_c0_seq1 2120 2869 .
ChrX	gffcl	locus	14188211	14190013	.	-	.	ID=RLOC_00000819;geneIDs=ORF2072.path1;transcripts=ORF2072.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14188211	14190013	.	-	.	ID=ORF2072.mrna1;geneID=ORF2072.path1;Name=ORF2072;Dir=sensecoverage=100.0;identity=100.0;matches=924;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000819
ChrX	stalkie_big_nohaplotig	exon	14188211	14188468	100	-	.	Parent=ORF2072.mrna1;Target=ORF2072 667 924 +
ChrX	stalkie_big_nohaplotig	exon	14188522	14188776	100	-	.	Parent=ORF2072.mrna1;Target=ORF2072 412 666 +
ChrX	stalkie_big_nohaplotig	exon	14189080	14189120	100	-	.	Parent=ORF2072.mrna1;Target=ORF2072 371 411 +
ChrX	stalkie_big_nohaplotig	exon	14189589	14189694	100	-	.	Parent=ORF2072.mrna1;Target=ORF2072 265 370 +
ChrX	stalkie_big_nohaplotig	exon	14189750	14190013	100	-	.	Parent=ORF2072.mrna1;Target=ORF2072 1 264 +
ChrX	stalkie_big_nohaplotig	CDS	14188211	14188468	.	-	0	Parent=ORF2072.mrna1;Target=ORF2072 667 924 +
ChrX	stalkie_big_nohaplotig	CDS	14188522	14188776	.	-	0	Parent=ORF2072.mrna1;Target=ORF2072 412 666 +
ChrX	stalkie_big_nohaplotig	CDS	14189080	14189120	.	-	2	Parent=ORF2072.mrna1;Target=ORF2072 371 411 +
ChrX	stalkie_big_nohaplotig	CDS	14189589	14189694	.	-	0	Parent=ORF2072.mrna1;Target=ORF2072 265 370 +
ChrX	stalkie_big_nohaplotig	CDS	14189750	14190013	.	-	0	Parent=ORF2072.mrna1;Target=ORF2072 1 264 +
ChrX	gffcl	locus	14203030	14203302	.	-	.	ID=RLOC_00000820;geneIDs=comp211194_c0_seq1.path1;transcripts=comp211194_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14203030	14203302	.	-	.	ID=comp211194_c0_seq1.mrna1;geneID=comp211194_c0_seq1.path1;Name=comp211194_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=273;mismatches=0;indels=0;unknowns=0;Target=comp211194_c0_seq1 273 1 .;CDS_Target=comp211194_c0_seq1 78 1 .;locus=RLOC_00000820
ChrX	stalkie_big_nohaplotig	exon	14203030	14203302	100	-	.	Parent=comp211194_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14203225	14203302	.	-	0	Parent=comp211194_c0_seq1.mrna1
ChrX	gffcl	locus	14204035	14204378	.	+	.	ID=RLOC_00000821;geneIDs=comp55200_c0_seq1.path1;transcripts=comp55200_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14204035	14204378	.	+	.	ID=comp55200_c0_seq1.mrna1;geneID=comp55200_c0_seq1.path1;Name=comp55200_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=340;mismatches=2;indels=3;unknowns=0;Target=comp55200_c0_seq1 343 1 .;CDS_Target=comp55200_c0_seq1 33 1 .;locus=RLOC_00000821
ChrX	stalkie_big_nohaplotig	exon	14204035	14204378	98	+	.	Parent=comp55200_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14204035	14204069	.	+	0	Parent=comp55200_c0_seq1.mrna1
ChrX	gffcl	locus	14209978	14214944	.	-	.	ID=RLOC_00000822;geneIDs=FBgn0032685.1.path1;transcripts=FBgn0032685.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14209978	14214944	.	-	.	ID=FBgn0032685.1.mrna1;geneID=FBgn0032685.1.path1;Name=FBgn0032685.1;Dir=sensecoverage=98.1;identity=100.0;matches=4162;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000822
ChrX	stalkie_big_nohaplotig	exon	14209978	14210232	100	-	.	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 3988 4242 +
ChrX	stalkie_big_nohaplotig	exon	14210305	14210458	100	-	.	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 3834 3987 +
ChrX	stalkie_big_nohaplotig	exon	14210517	14210663	100	-	.	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 3687 3833 +
ChrX	stalkie_big_nohaplotig	exon	14210730	14210991	100	-	.	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 3425 3686 +
ChrX	stalkie_big_nohaplotig	exon	14211058	14211211	100	-	.	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 3271 3424 +
ChrX	stalkie_big_nohaplotig	exon	14211290	14212686	100	-	.	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 1874 3270 +
ChrX	stalkie_big_nohaplotig	exon	14212755	14212972	100	-	.	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 1656 1873 +
ChrX	stalkie_big_nohaplotig	exon	14213038	14213313	100	-	.	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 1380 1655 +
ChrX	stalkie_big_nohaplotig	exon	14213466	14213734	100	-	.	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 1111 1379 +
ChrX	stalkie_big_nohaplotig	exon	14213796	14213910	100	-	.	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 996 1110 +
ChrX	stalkie_big_nohaplotig	exon	14213969	14214317	100	-	.	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 647 995 +
ChrX	stalkie_big_nohaplotig	exon	14214379	14214944	100	-	.	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 81 646 +
ChrX	stalkie_big_nohaplotig	CDS	14209978	14210232	.	-	0	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 3988 4242 +
ChrX	stalkie_big_nohaplotig	CDS	14210305	14210458	.	-	1	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 3834 3987 +
ChrX	stalkie_big_nohaplotig	CDS	14210517	14210663	.	-	1	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 3687 3833 +
ChrX	stalkie_big_nohaplotig	CDS	14210730	14210991	.	-	2	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 3425 3686 +
ChrX	stalkie_big_nohaplotig	CDS	14211058	14211211	.	-	0	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 3271 3424 +
ChrX	stalkie_big_nohaplotig	CDS	14211290	14212686	.	-	2	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 1874 3270 +
ChrX	stalkie_big_nohaplotig	CDS	14212755	14212972	.	-	1	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 1656 1873 +
ChrX	stalkie_big_nohaplotig	CDS	14213038	14213313	.	-	1	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 1380 1655 +
ChrX	stalkie_big_nohaplotig	CDS	14213466	14213734	.	-	0	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 1111 1379 +
ChrX	stalkie_big_nohaplotig	CDS	14213796	14213910	.	-	1	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 996 1110 +
ChrX	stalkie_big_nohaplotig	CDS	14213969	14214317	.	-	2	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 647 995 +
ChrX	stalkie_big_nohaplotig	CDS	14214379	14214943	.	-	0	Parent=FBgn0032685.1.mrna1;Target=FBgn0032685.1 82 646 +
ChrX	gffcl	locus	14232552	15097603	.	.	.	ID=RLOC_00000823;geneIDs=FBgn0031313.1.path1,FBgn0031421.1.path1,FBgn0031995.1.path1,comp118259_c0_seq1.path1,comp144773_c0_seq1.path1,comp145038_c0_seq1.path1,comp147256_c0_seq1.path1,comp147980_c0_seq1.path1;transcripts=comp147256_c0_seq1.mrna1,comp144773_c0_seq1.mrna1,FBgn0031995.1.mrna1,comp145038_c0_seq1.mrna1,FBgn0031421.1.mrna1,FBgn0031313.1.mrna1,comp147980_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14232552	15096864	.	+	.	ID=comp147256_c0_seq1.mrna1;geneID=comp147256_c0_seq1.path1;Name=comp147256_c0_seq1;Dir=antisensecoverage=81.8;identity=98.5;matches=2729;mismatches=31;indels=11;unknowns=0;locus=RLOC_00000823
ChrX	stalkie_big_nohaplotig	exon	14232552	14232557	100	+	.	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 2817 2822 -
ChrX	stalkie_big_nohaplotig	exon	14239642	14239646	100	+	.	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 2812 2816 -
ChrX	stalkie_big_nohaplotig	exon	14243531	14243538	100	+	.	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 2804 2811 -
ChrX	stalkie_big_nohaplotig	exon	14245152	14245157	100	+	.	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 2798 2803 -
ChrX	stalkie_big_nohaplotig	exon	14246484	14246491	100	+	.	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 2790 2797 -
ChrX	stalkie_big_nohaplotig	exon	14259016	14259023	100	+	.	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 2776 2783 -
ChrX	stalkie_big_nohaplotig	exon	14260637	14260643	100	+	.	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 2769 2775 -
ChrX	stalkie_big_nohaplotig	exon	14262613	14262619	100	+	.	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 2759 2765 -
ChrX	stalkie_big_nohaplotig	exon	14264019	14264021	100	+	.	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 2756 2758 -
ChrX	stalkie_big_nohaplotig	exon	14266334	14266344	100	+	.	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 2745 2755 -
ChrX	stalkie_big_nohaplotig	exon	14615073	14615084	100	+	.	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 2729 2740 -
ChrX	stalkie_big_nohaplotig	exon	14622608	14622615	100	+	.	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 2721 2728 -
ChrX	stalkie_big_nohaplotig	exon	14627657	14627664	100	+	.	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 2713 2720 -
ChrX	stalkie_big_nohaplotig	exon	14631734	14631738	100	+	.	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 2708 2712 -
ChrX	stalkie_big_nohaplotig	exon	15079589	15079648	53	+	.	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 2638 2706 -
ChrX	stalkie_big_nohaplotig	exon	15082173	15082553	100	+	.	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 2257 2637 -
ChrX	stalkie_big_nohaplotig	exon	15090769	15090896	100	+	.	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 2129 2256 -
ChrX	stalkie_big_nohaplotig	exon	15093523	15093736	99	+	.	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 1915 2128 -
ChrX	stalkie_big_nohaplotig	exon	15093993	15094551	99	+	.	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 1356 1914 -
ChrX	stalkie_big_nohaplotig	exon	15095550	15096864	99	+	.	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 41 1355 -
ChrX	stalkie_big_nohaplotig	CDS	15090823	15090896	.	+	0	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 2129 2202 .
ChrX	stalkie_big_nohaplotig	CDS	15093523	15093736	.	+	1	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 1915 2128 .
ChrX	stalkie_big_nohaplotig	CDS	15093993	15094551	.	+	0	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 1356 1914 .
ChrX	stalkie_big_nohaplotig	CDS	15095550	15096282	.	+	2	Parent=comp147256_c0_seq1.mrna1;Target=comp147256_c0_seq1 622 1355 .
ChrX	stalkie_big_nohaplotig	mRNA	14264022	14264701	.	-	.	ID=comp144773_c0_seq1.mrna1;geneID=comp144773_c0_seq1.path1;Name=comp144773_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.4;matches=678;mismatches=2;indels=2;unknowns=0;Target=comp144773_c0_seq1 682 1 .;CDS_Target=comp144773_c0_seq1 142 2 .;locus=RLOC_00000823
ChrX	stalkie_big_nohaplotig	exon	14264022	14264701	99	-	.	Parent=comp144773_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14264561	14264700	.	-	0	Parent=comp144773_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14610279	14626743	.	-	.	ID=FBgn0031995.1.mrna1;geneID=FBgn0031995.1.path1;Name=FBgn0031995.1;Dir=sensecoverage=100.0;identity=99.8;matches=3289;mismatches=5;indels=0;unknowns=0;locus=RLOC_00000823
ChrX	stalkie_big_nohaplotig	exon	14610279	14610461	100	-	.	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 3112 3294 +
ChrX	stalkie_big_nohaplotig	exon	14610530	14610605	100	-	.	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 3036 3111 +
ChrX	stalkie_big_nohaplotig	exon	14610945	14611217	99	-	.	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 2763 3035 +
ChrX	stalkie_big_nohaplotig	exon	14611283	14611431	100	-	.	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 2614 2762 +
ChrX	stalkie_big_nohaplotig	exon	14611633	14612100	99	-	.	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 2146 2613 +
ChrX	stalkie_big_nohaplotig	exon	14612183	14612325	100	-	.	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 2003 2145 +
ChrX	stalkie_big_nohaplotig	exon	14612407	14612836	100	-	.	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 1573 2002 +
ChrX	stalkie_big_nohaplotig	exon	14614034	14614138	100	-	.	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 1468 1572 +
ChrX	stalkie_big_nohaplotig	exon	14622775	14623150	99	-	.	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 1092 1467 +
ChrX	stalkie_big_nohaplotig	exon	14623221	14623393	100	-	.	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 919 1091 +
ChrX	stalkie_big_nohaplotig	exon	14623751	14623902	100	-	.	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 767 918 +
ChrX	stalkie_big_nohaplotig	exon	14625660	14625789	100	-	.	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 637 766 +
ChrX	stalkie_big_nohaplotig	exon	14625843	14626261	99	-	.	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 218 636 +
ChrX	stalkie_big_nohaplotig	exon	14626463	14626626	100	-	.	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 54 217 +
ChrX	stalkie_big_nohaplotig	exon	14626691	14626743	100	-	.	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 1 53 +
ChrX	stalkie_big_nohaplotig	CDS	14610279	14610461	.	-	0	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 3112 3294 +
ChrX	stalkie_big_nohaplotig	CDS	14610530	14610605	.	-	1	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 3036 3111 +
ChrX	stalkie_big_nohaplotig	CDS	14610945	14611217	.	-	1	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 2763 3035 +
ChrX	stalkie_big_nohaplotig	CDS	14611283	14611431	.	-	0	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 2614 2762 +
ChrX	stalkie_big_nohaplotig	CDS	14611633	14612100	.	-	0	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 2146 2613 +
ChrX	stalkie_big_nohaplotig	CDS	14612183	14612325	.	-	2	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 2003 2145 +
ChrX	stalkie_big_nohaplotig	CDS	14612407	14612836	.	-	0	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 1573 2002 +
ChrX	stalkie_big_nohaplotig	CDS	14614034	14614138	.	-	0	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 1468 1572 +
ChrX	stalkie_big_nohaplotig	CDS	14622775	14623150	.	-	1	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 1092 1467 +
ChrX	stalkie_big_nohaplotig	CDS	14623221	14623393	.	-	0	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 919 1091 +
ChrX	stalkie_big_nohaplotig	CDS	14623751	14623902	.	-	2	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 767 918 +
ChrX	stalkie_big_nohaplotig	CDS	14625660	14625789	.	-	0	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 637 766 +
ChrX	stalkie_big_nohaplotig	CDS	14625843	14626261	.	-	2	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 218 636 +
ChrX	stalkie_big_nohaplotig	CDS	14626463	14626626	.	-	1	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 54 217 +
ChrX	stalkie_big_nohaplotig	CDS	14626691	14626743	.	-	0	Parent=FBgn0031995.1.mrna1;Target=FBgn0031995.1 1 53 +
ChrX	stalkie_big_nohaplotig	mRNA	14621894	14622797	.	+	.	ID=comp145038_c0_seq1.mrna1;geneID=comp145038_c0_seq1.path1;Name=comp145038_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=898;mismatches=4;indels=2;unknowns=0;Target=comp145038_c0_seq1 902 1 .;CDS_Target=comp145038_c0_seq1 627 454 .;locus=RLOC_00000823
ChrX	stalkie_big_nohaplotig	exon	14621894	14622797	99	+	.	Parent=comp145038_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14622347	14622520	.	+	0	Parent=comp145038_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14630861	14632660	.	+	.	ID=FBgn0031421.1.mrna1;geneID=FBgn0031421.1.path1;Name=FBgn0031421.1;Dir=sensecoverage=100.0;identity=99.7;matches=1664;mismatches=4;indels=1;unknowns=0;locus=RLOC_00000823
ChrX	stalkie_big_nohaplotig	exon	14630861	14631917	99	+	.	Parent=FBgn0031421.1.mrna1;Target=FBgn0031421.1 1 1057 +
ChrX	stalkie_big_nohaplotig	exon	14631990	14632207	99	+	.	Parent=FBgn0031421.1.mrna1;Target=FBgn0031421.1 1058 1274 +
ChrX	stalkie_big_nohaplotig	exon	14632267	14632660	100	+	.	Parent=FBgn0031421.1.mrna1;Target=FBgn0031421.1 1275 1668 +
ChrX	stalkie_big_nohaplotig	CDS	14630861	14631917	.	+	0	Parent=FBgn0031421.1.mrna1;Target=FBgn0031421.1 1 1057 +
ChrX	stalkie_big_nohaplotig	CDS	14631990	14632207	.	+	2	Parent=FBgn0031421.1.mrna1;Target=FBgn0031421.1 1058 1274 +
ChrX	stalkie_big_nohaplotig	CDS	14632267	14632660	.	+	0	Parent=FBgn0031421.1.mrna1;Target=FBgn0031421.1 1275 1668 +
ChrX	stalkie_big_nohaplotig	mRNA	15090808	15096279	.	+	.	ID=FBgn0031313.1.mrna1;geneID=FBgn0031313.1.path1;Name=FBgn0031313.1;Dir=sensecoverage=99.9;identity=99.7;matches=1588;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000823
ChrX	stalkie_big_nohaplotig	exon	15090808	15090896	100	+	.	Parent=FBgn0031313.1.mrna1;Target=FBgn0031313.1 1 89 +
ChrX	stalkie_big_nohaplotig	exon	15093523	15093736	99	+	.	Parent=FBgn0031313.1.mrna1;Target=FBgn0031313.1 90 303 +
ChrX	stalkie_big_nohaplotig	exon	15093795	15093846	100	+	.	Parent=FBgn0031313.1.mrna1;Target=FBgn0031313.1 304 355 +
ChrX	stalkie_big_nohaplotig	exon	15094045	15094551	99	+	.	Parent=FBgn0031313.1.mrna1;Target=FBgn0031313.1 356 862 +
ChrX	stalkie_big_nohaplotig	exon	15095550	15096279	99	+	.	Parent=FBgn0031313.1.mrna1;Target=FBgn0031313.1 863 1592 +
ChrX	stalkie_big_nohaplotig	CDS	15090808	15090896	.	+	0	Parent=FBgn0031313.1.mrna1;Target=FBgn0031313.1 1 89 +
ChrX	stalkie_big_nohaplotig	CDS	15093523	15093736	.	+	1	Parent=FBgn0031313.1.mrna1;Target=FBgn0031313.1 90 303 +
ChrX	stalkie_big_nohaplotig	CDS	15093795	15093846	.	+	0	Parent=FBgn0031313.1.mrna1;Target=FBgn0031313.1 304 355 +
ChrX	stalkie_big_nohaplotig	CDS	15094045	15094551	.	+	2	Parent=FBgn0031313.1.mrna1;Target=FBgn0031313.1 356 862 +
ChrX	stalkie_big_nohaplotig	CDS	15095550	15096277	.	+	2	Parent=FBgn0031313.1.mrna1;Target=FBgn0031313.1 863 1590 +
ChrX	stalkie_big_nohaplotig	mRNA	15094528	15095570	.	-	.	ID=comp147980_c0_seq1.mrna1;geneID=comp147980_c0_seq1.path1;Name=comp147980_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=1013;mismatches=30;indels=0;unknowns=0;Target=comp147980_c0_seq1 1043 1 .;CDS_Target=comp147980_c0_seq1 405 259 .;locus=RLOC_00000823
ChrX	stalkie_big_nohaplotig	exon	15094528	15095570	97	-	.	Parent=comp147980_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15095166	15095312	.	-	0	Parent=comp147980_c0_seq1.mrna1
ChrX	gffcl	locus	14272485	14273331	.	-	.	ID=RLOC_00000824;geneIDs=comp153904_c0_seq1.path1;transcripts=comp153904_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14272485	14273331	.	-	.	ID=comp153904_c0_seq1.mrna1;geneID=comp153904_c0_seq1.path1;Name=comp153904_c0_seq1;Dir=sensecoverage=99.1;identity=100.0;matches=785;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000824
ChrX	stalkie_big_nohaplotig	exon	14272485	14272973	100	-	.	Parent=comp153904_c0_seq1.mrna1;Target=comp153904_c0_seq1 297 785 +
ChrX	stalkie_big_nohaplotig	exon	14273036	14273331	100	-	.	Parent=comp153904_c0_seq1.mrna1;Target=comp153904_c0_seq1 1 296 +
ChrX	stalkie_big_nohaplotig	CDS	14272620	14272973	.	-	0	Parent=comp153904_c0_seq1.mrna1;Target=comp153904_c0_seq1 297 650 +
ChrX	stalkie_big_nohaplotig	CDS	14273036	14273284	.	-	0	Parent=comp153904_c0_seq1.mrna1;Target=comp153904_c0_seq1 48 296 +
ChrX	gffcl	locus	14276236	14276766	.	+	.	ID=RLOC_00000825;geneIDs=FBgn0000253.21.path1;transcripts=FBgn0000253.21.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14276236	14276766	.	+	.	ID=FBgn0000253.21.mrna1;geneID=FBgn0000253.21.path1;Name=FBgn0000253.21;Dir=indeterminatecoverage=100.0;identity=100.0;matches=531;mismatches=0;indels=0;unknowns=0;Target=FBgn0000253.21 531 1 .;locus=RLOC_00000825
ChrX	stalkie_big_nohaplotig	exon	14276236	14276766	100	+	.	Parent=FBgn0000253.21.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14276236	14276766	.	+	0	Parent=FBgn0000253.21.mrna1
ChrX	gffcl	locus	14293303	14305034	.	-	.	ID=RLOC_00000826;geneIDs=FBgn0032684.1.path1;transcripts=FBgn0032684.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14293303	14305034	.	-	.	ID=FBgn0032684.1.mrna1;geneID=FBgn0032684.1.path1;Name=FBgn0032684.1;Dir=sensecoverage=100.0;identity=99.4;matches=1640;mismatches=10;indels=0;unknowns=0;locus=RLOC_00000826
ChrX	stalkie_big_nohaplotig	exon	14293303	14294031	99	-	.	Parent=FBgn0032684.1.mrna1;Target=FBgn0032684.1 922 1650 +
ChrX	stalkie_big_nohaplotig	exon	14294758	14294915	96	-	.	Parent=FBgn0032684.1.mrna1;Target=FBgn0032684.1 764 921 +
ChrX	stalkie_big_nohaplotig	exon	14295003	14295449	99	-	.	Parent=FBgn0032684.1.mrna1;Target=FBgn0032684.1 317 763 +
ChrX	stalkie_big_nohaplotig	exon	14295518	14295764	100	-	.	Parent=FBgn0032684.1.mrna1;Target=FBgn0032684.1 70 316 +
ChrX	stalkie_big_nohaplotig	exon	14304966	14305034	100	-	.	Parent=FBgn0032684.1.mrna1;Target=FBgn0032684.1 1 69 +
ChrX	stalkie_big_nohaplotig	CDS	14293303	14294031	.	-	0	Parent=FBgn0032684.1.mrna1;Target=FBgn0032684.1 922 1650 +
ChrX	stalkie_big_nohaplotig	CDS	14294758	14294915	.	-	2	Parent=FBgn0032684.1.mrna1;Target=FBgn0032684.1 764 921 +
ChrX	stalkie_big_nohaplotig	CDS	14295003	14295449	.	-	2	Parent=FBgn0032684.1.mrna1;Target=FBgn0032684.1 317 763 +
ChrX	stalkie_big_nohaplotig	CDS	14295518	14295764	.	-	0	Parent=FBgn0032684.1.mrna1;Target=FBgn0032684.1 70 316 +
ChrX	stalkie_big_nohaplotig	CDS	14304966	14305034	.	-	0	Parent=FBgn0032684.1.mrna1;Target=FBgn0032684.1 1 69 +
ChrX	gffcl	locus	14311180	14315069	.	-	.	ID=RLOC_00000827;geneIDs=comp117684_c0_seq1.path1;transcripts=comp117684_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14311180	14315069	.	-	.	ID=comp117684_c0_seq1.mrna1;geneID=comp117684_c0_seq1.path1;Name=comp117684_c0_seq1;Dir=antisensecoverage=98.6;identity=98.7;matches=1586;mismatches=11;indels=10;unknowns=0;locus=RLOC_00000827
ChrX	stalkie_big_nohaplotig	exon	14311180	14311482	98	-	.	Parent=comp117684_c0_seq1.mrna1;Target=comp117684_c0_seq1 1 303 -
ChrX	stalkie_big_nohaplotig	exon	14311540	14311821	98	-	.	Parent=comp117684_c0_seq1.mrna1;Target=comp117684_c0_seq1 304 585 -
ChrX	stalkie_big_nohaplotig	exon	14314048	14315069	98	-	.	Parent=comp117684_c0_seq1.mrna1;Target=comp117684_c0_seq1 586 1597 -
ChrX	stalkie_big_nohaplotig	CDS	14311813	14311821	.	-	0	Parent=comp117684_c0_seq1.mrna1;Target=comp117684_c0_seq1 577 585 .
ChrX	stalkie_big_nohaplotig	CDS	14314048	14314386	.	-	0	Parent=comp117684_c0_seq1.mrna1;Target=comp117684_c0_seq1 586 924 .
ChrX	gffcl	locus	14328286	14349446	.	+	.	ID=RLOC_00000828;geneIDs=FBgn0032683.1.path1;transcripts=FBgn0032683.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14328286	14349446	.	+	.	ID=FBgn0032683.1.mrna1;geneID=FBgn0032683.1.path1;Name=FBgn0032683.1;Dir=sensecoverage=100.0;identity=99.6;matches=7125;mismatches=30;indels=0;unknowns=0;locus=RLOC_00000828
ChrX	stalkie_big_nohaplotig	exon	14328286	14328400	100	+	.	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 1 115 +
ChrX	stalkie_big_nohaplotig	exon	14340229	14340425	100	+	.	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 116 312 +
ChrX	stalkie_big_nohaplotig	exon	14340506	14340736	99	+	.	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 313 543 +
ChrX	stalkie_big_nohaplotig	exon	14340790	14340971	100	+	.	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 544 725 +
ChrX	stalkie_big_nohaplotig	exon	14341050	14341632	99	+	.	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 726 1308 +
ChrX	stalkie_big_nohaplotig	exon	14342937	14343965	99	+	.	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 1309 2337 +
ChrX	stalkie_big_nohaplotig	exon	14344152	14344403	99	+	.	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 2338 2589 +
ChrX	stalkie_big_nohaplotig	exon	14344468	14345618	99	+	.	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 2590 3740 +
ChrX	stalkie_big_nohaplotig	exon	14345682	14346136	100	+	.	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 3741 4195 +
ChrX	stalkie_big_nohaplotig	exon	14346196	14346558	99	+	.	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 4196 4558 +
ChrX	stalkie_big_nohaplotig	exon	14346674	14347577	99	+	.	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 4559 5462 +
ChrX	stalkie_big_nohaplotig	exon	14347754	14349446	99	+	.	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 5463 7155 +
ChrX	stalkie_big_nohaplotig	CDS	14328286	14328400	.	+	0	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 1 115 +
ChrX	stalkie_big_nohaplotig	CDS	14340229	14340425	.	+	2	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 116 312 +
ChrX	stalkie_big_nohaplotig	CDS	14340506	14340736	.	+	0	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 313 543 +
ChrX	stalkie_big_nohaplotig	CDS	14340790	14340971	.	+	0	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 544 725 +
ChrX	stalkie_big_nohaplotig	CDS	14341050	14341632	.	+	1	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 726 1308 +
ChrX	stalkie_big_nohaplotig	CDS	14342937	14343965	.	+	0	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 1309 2337 +
ChrX	stalkie_big_nohaplotig	CDS	14344152	14344403	.	+	0	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 2338 2589 +
ChrX	stalkie_big_nohaplotig	CDS	14344468	14345618	.	+	0	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 2590 3740 +
ChrX	stalkie_big_nohaplotig	CDS	14345682	14346136	.	+	1	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 3741 4195 +
ChrX	stalkie_big_nohaplotig	CDS	14346196	14346558	.	+	2	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 4196 4558 +
ChrX	stalkie_big_nohaplotig	CDS	14346674	14347577	.	+	2	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 4559 5462 +
ChrX	stalkie_big_nohaplotig	CDS	14347754	14349446	.	+	1	Parent=FBgn0032683.1.mrna1;Target=FBgn0032683.1 5463 7155 +
ChrX	gffcl	locus	14392539	14398916	.	+	.	ID=RLOC_00000830;geneIDs=FBgn0032681.1.path1;transcripts=FBgn0032681.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14392539	14398916	.	+	.	ID=FBgn0032681.1.mrna1;geneID=FBgn0032681.1.path1;Name=FBgn0032681.1;Dir=sensecoverage=96.7;identity=100.0;matches=2203;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000830
ChrX	stalkie_big_nohaplotig	exon	14392539	14392601	100	+	.	Parent=FBgn0032681.1.mrna1;Target=FBgn0032681.1 77 139 +
ChrX	stalkie_big_nohaplotig	exon	14392669	14392807	100	+	.	Parent=FBgn0032681.1.mrna1;Target=FBgn0032681.1 140 278 +
ChrX	stalkie_big_nohaplotig	exon	14392892	14393006	100	+	.	Parent=FBgn0032681.1.mrna1;Target=FBgn0032681.1 279 393 +
ChrX	stalkie_big_nohaplotig	exon	14393086	14394156	99	+	.	Parent=FBgn0032681.1.mrna1;Target=FBgn0032681.1 394 1464 +
ChrX	stalkie_big_nohaplotig	exon	14394219	14394338	100	+	.	Parent=FBgn0032681.1.mrna1;Target=FBgn0032681.1 1465 1584 +
ChrX	stalkie_big_nohaplotig	exon	14394416	14394912	100	+	.	Parent=FBgn0032681.1.mrna1;Target=FBgn0032681.1 1585 2081 +
ChrX	stalkie_big_nohaplotig	exon	14398634	14398725	100	+	.	Parent=FBgn0032681.1.mrna1;Target=FBgn0032681.1 2082 2173 +
ChrX	stalkie_big_nohaplotig	exon	14398810	14398916	100	+	.	Parent=FBgn0032681.1.mrna1;Target=FBgn0032681.1 2174 2280 +
ChrX	stalkie_big_nohaplotig	CDS	14392541	14392601	.	+	0	Parent=FBgn0032681.1.mrna1;Target=FBgn0032681.1 79 139 +
ChrX	stalkie_big_nohaplotig	CDS	14392669	14392807	.	+	2	Parent=FBgn0032681.1.mrna1;Target=FBgn0032681.1 140 278 +
ChrX	stalkie_big_nohaplotig	CDS	14392892	14393006	.	+	1	Parent=FBgn0032681.1.mrna1;Target=FBgn0032681.1 279 393 +
ChrX	stalkie_big_nohaplotig	CDS	14393086	14394156	.	+	0	Parent=FBgn0032681.1.mrna1;Target=FBgn0032681.1 394 1464 +
ChrX	stalkie_big_nohaplotig	CDS	14394219	14394338	.	+	0	Parent=FBgn0032681.1.mrna1;Target=FBgn0032681.1 1465 1584 +
ChrX	stalkie_big_nohaplotig	CDS	14394416	14394912	.	+	0	Parent=FBgn0032681.1.mrna1;Target=FBgn0032681.1 1585 2081 +
ChrX	stalkie_big_nohaplotig	CDS	14398634	14398725	.	+	1	Parent=FBgn0032681.1.mrna1;Target=FBgn0032681.1 2082 2173 +
ChrX	stalkie_big_nohaplotig	CDS	14398810	14398916	.	+	2	Parent=FBgn0032681.1.mrna1;Target=FBgn0032681.1 2174 2280 +
ChrX	gffcl	locus	14395346	14396317	.	-	.	ID=RLOC_00000831;geneIDs=ORF2599.path1;transcripts=ORF2599.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14395346	14396317	.	-	.	ID=ORF2599.mrna1;geneID=ORF2599.path1;Name=ORF2599;Dir=sensecoverage=100.0;identity=99.6;matches=831;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000831
ChrX	stalkie_big_nohaplotig	exon	14395346	14395465	100	-	.	Parent=ORF2599.mrna1;Target=ORF2599 715 834 +
ChrX	stalkie_big_nohaplotig	exon	14395546	14396189	99	-	.	Parent=ORF2599.mrna1;Target=ORF2599 71 714 +
ChrX	stalkie_big_nohaplotig	exon	14396248	14396317	100	-	.	Parent=ORF2599.mrna1;Target=ORF2599 1 70 +
ChrX	stalkie_big_nohaplotig	CDS	14395346	14395465	.	-	0	Parent=ORF2599.mrna1;Target=ORF2599 715 834 +
ChrX	stalkie_big_nohaplotig	CDS	14395546	14396189	.	-	2	Parent=ORF2599.mrna1;Target=ORF2599 71 714 +
ChrX	stalkie_big_nohaplotig	CDS	14396248	14396317	.	-	0	Parent=ORF2599.mrna1;Target=ORF2599 1 70 +
ChrX	gffcl	locus	14400085	14405098	.	-	.	ID=RLOC_00000832;geneIDs=comp163820_c0_seq1.path1;transcripts=comp163820_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14400085	14405098	.	-	.	ID=comp163820_c0_seq1.mrna1;geneID=comp163820_c0_seq1.path1;Name=comp163820_c0_seq1;Dir=antisensecoverage=100.0;identity=97.9;matches=4740;mismatches=45;indels=56;unknowns=0;Target=comp163820_c0_seq1 245 544 .;locus=RLOC_00000832
ChrX	stalkie_big_nohaplotig	exon	14400085	14400831	98	-	.	Parent=comp163820_c0_seq1.mrna1;Target=comp163820_c0_seq1 1 747 -
ChrX	stalkie_big_nohaplotig	exon	14401052	14405098	97	-	.	Parent=comp163820_c0_seq1.mrna1;Target=comp163820_c0_seq1 748 4832 -
ChrX	stalkie_big_nohaplotig	CDS	14400329	14400628	.	-	0	Parent=comp163820_c0_seq1.mrna1
ChrX	gffcl	locus	14405984	14412564	.	-	.	ID=RLOC_00000833;geneIDs=comp152101_c2_seq1.path1;transcripts=comp152101_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14405984	14412564	.	-	.	ID=comp152101_c2_seq1.mrna1;geneID=comp152101_c2_seq1.path1;Name=comp152101_c2_seq1;Dir=sensecoverage=100.0;identity=99.2;matches=1185;mismatches=1;indels=9;unknowns=0;Target=comp152101_c2_seq1 557 721 +;locus=RLOC_00000833
ChrX	stalkie_big_nohaplotig	exon	14405984	14406457	98	-	.	Parent=comp152101_c2_seq1.mrna1;Target=comp152101_c2_seq1 722 1186 +
ChrX	stalkie_big_nohaplotig	exon	14411844	14412564	99	-	.	Parent=comp152101_c2_seq1.mrna1;Target=comp152101_c2_seq1 1 721 +
ChrX	stalkie_big_nohaplotig	CDS	14411844	14412008	.	-	0	Parent=comp152101_c2_seq1.mrna1
ChrX	gffcl	locus	14410658	14411168	.	+	.	ID=RLOC_00000834;geneIDs=comp139802_c0_seq1.path1;transcripts=comp139802_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14410658	14411168	.	+	.	ID=comp139802_c0_seq1.mrna1;geneID=comp139802_c0_seq1.path1;Name=comp139802_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=511;mismatches=0;indels=0;unknowns=0;Target=comp139802_c0_seq1 511 1 .;CDS_Target=comp139802_c0_seq1 231 1 .;locus=RLOC_00000834
ChrX	stalkie_big_nohaplotig	exon	14410658	14411168	100	+	.	Parent=comp139802_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14410658	14410888	.	+	0	Parent=comp139802_c0_seq1.mrna1
ChrX	gffcl	locus	14586034	14587741	.	+	.	ID=RLOC_00000837;geneIDs=comp157633_c0_seq1.path1;transcripts=comp157633_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14586034	14587741	.	+	.	ID=comp157633_c0_seq1.mrna1;geneID=comp157633_c0_seq1.path1;Name=comp157633_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.6;matches=1701;mismatches=6;indels=19;unknowns=0;Target=comp157633_c0_seq1 1728 4 .;CDS_Target=comp157633_c0_seq1 1727 1590 .;locus=RLOC_00000837
ChrX	stalkie_big_nohaplotig	exon	14586034	14587741	98	+	.	Parent=comp157633_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14587603	14587740	.	+	0	Parent=comp157633_c0_seq1.mrna1
ChrX	gffcl	locus	14589079	14590188	.	+	.	ID=RLOC_00000838;geneIDs=comp154251_c0_seq1.path1;transcripts=comp154251_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14589079	14590188	.	+	.	ID=comp154251_c0_seq1.mrna1;geneID=comp154251_c0_seq1.path1;Name=comp154251_c0_seq1;Dir=indeterminatecoverage=98.6;identity=96.8;matches=1086;mismatches=20;indels=16;unknowns=0;Target=comp154251_c0_seq1 1118 1 .;CDS_Target=comp154251_c0_seq1 89 3 .;locus=RLOC_00000838
ChrX	stalkie_big_nohaplotig	exon	14589079	14590188	96	+	.	Parent=comp154251_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14589081	14589171	.	+	0	Parent=comp154251_c0_seq1.mrna1
ChrX	gffcl	locus	14590487	14591950	.	-	.	ID=RLOC_00000839;geneIDs=ORF748.path1;transcripts=ORF748.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14590487	14591950	.	-	.	ID=ORF748.mrna1;geneID=ORF748.path1;Name=ORF748;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1453;mismatches=11;indels=0;unknowns=0;Target=ORF748 1464 1 .;locus=RLOC_00000839
ChrX	stalkie_big_nohaplotig	exon	14590487	14591950	99	-	.	Parent=ORF748.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14590487	14591950	.	-	0	Parent=ORF748.mrna1
ChrX	gffcl	locus	14591989	14594983	.	-	.	ID=RLOC_00000840;geneIDs=FBgn0083970.1.path1,comp71418_c0_seq1.path1;transcripts=comp71418_c0_seq1.mrna1,FBgn0083970.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14591989	14594927	.	-	.	ID=comp71418_c0_seq1.mrna1;geneID=comp71418_c0_seq1.path1;Name=comp71418_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=541;mismatches=2;indels=0;unknowns=0;Target=comp71418_c0_seq1 58 195 .;locus=RLOC_00000840
ChrX	stalkie_big_nohaplotig	exon	14591989	14592510	99	-	.	Parent=comp71418_c0_seq1.mrna1;Target=comp71418_c0_seq1 1 522 -
ChrX	stalkie_big_nohaplotig	exon	14594907	14594927	100	-	.	Parent=comp71418_c0_seq1.mrna1;Target=comp71418_c0_seq1 523 543 -
ChrX	stalkie_big_nohaplotig	CDS	14592046	14592183	.	-	0	Parent=comp71418_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14594575	14594983	.	-	.	ID=FBgn0083970.1.mrna1;geneID=FBgn0083970.1.path1;Name=FBgn0083970.1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=398;mismatches=4;indels=7;unknowns=0;Target=FBgn0083970.1 402 1 .;CDS_Target=FBgn0083970.1 402 37 .;locus=RLOC_00000840
ChrX	stalkie_big_nohaplotig	exon	14594575	14594983	97	-	.	Parent=FBgn0083970.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14594575	14594940	.	-	0	Parent=FBgn0083970.1.mrna1
ChrX	gffcl	locus	14593436	14594133	.	+	.	ID=RLOC_00000841;geneIDs=comp149043_c0_seq1.path1;transcripts=comp149043_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14593436	14594133	.	+	.	ID=comp149043_c0_seq1.mrna1;geneID=comp149043_c0_seq1.path1;Name=comp149043_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=692;mismatches=6;indels=0;unknowns=0;Target=comp149043_c0_seq1 698 1 .;CDS_Target=comp149043_c0_seq1 409 167 .;locus=RLOC_00000841
ChrX	stalkie_big_nohaplotig	exon	14593436	14594133	99	+	.	Parent=comp149043_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14593602	14593844	.	+	0	Parent=comp149043_c0_seq1.mrna1
ChrX	gffcl	locus	14596038	14597985	.	-	.	ID=RLOC_00000842;geneIDs=comp142870_c1_seq1.path1;transcripts=comp142870_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14596038	14597985	.	-	.	ID=comp142870_c1_seq1.mrna1;geneID=comp142870_c1_seq1.path1;Name=comp142870_c1_seq1;Dir=sensecoverage=99.8;identity=99.1;matches=550;mismatches=4;indels=1;unknowns=0;locus=RLOC_00000842
ChrX	stalkie_big_nohaplotig	exon	14596038	14596568	99	-	.	Parent=comp142870_c1_seq1.mrna1;Target=comp142870_c1_seq1 25 554 +
ChrX	stalkie_big_nohaplotig	exon	14597962	14597985	95	-	.	Parent=comp142870_c1_seq1.mrna1;Target=comp142870_c1_seq1 1 24 +
ChrX	stalkie_big_nohaplotig	CDS	14596434	14596568	.	-	2	Parent=comp142870_c1_seq1.mrna1;Target=comp142870_c1_seq1 25 158 +
ChrX	stalkie_big_nohaplotig	CDS	14597962	14597983	.	-	0	Parent=comp142870_c1_seq1.mrna1;Target=comp142870_c1_seq1 3 24 +
ChrX	gffcl	locus	14602813	14603889	.	-	.	ID=RLOC_00000843;geneIDs=comp117308_c0_seq1.path1;transcripts=comp117308_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14602813	14603889	.	-	.	ID=comp117308_c0_seq1.mrna1;geneID=comp117308_c0_seq1.path1;Name=comp117308_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1077;mismatches=0;indels=0;unknowns=0;Target=comp117308_c0_seq1 1077 1 .;CDS_Target=comp117308_c0_seq1 403 209 .;locus=RLOC_00000843
ChrX	stalkie_big_nohaplotig	exon	14602813	14603889	100	-	.	Parent=comp117308_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14603487	14603681	.	-	0	Parent=comp117308_c0_seq1.mrna1
ChrX	gffcl	locus	14604677	14606624	.	-	.	ID=RLOC_00000844;geneIDs=comp142870_c1_seq1.path2;transcripts=comp142870_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	14604677	14606624	.	-	.	ID=comp142870_c1_seq1.mrna2;geneID=comp142870_c1_seq1.path2;Name=comp142870_c1_seq1;Dir=sensecoverage=99.8;identity=99.1;matches=550;mismatches=4;indels=1;unknowns=0;locus=RLOC_00000844
ChrX	stalkie_big_nohaplotig	exon	14604677	14605207	99	-	.	Parent=comp142870_c1_seq1.mrna2;Target=comp142870_c1_seq1 25 554 +
ChrX	stalkie_big_nohaplotig	exon	14606601	14606624	95	-	.	Parent=comp142870_c1_seq1.mrna2;Target=comp142870_c1_seq1 1 24 +
ChrX	stalkie_big_nohaplotig	CDS	14605073	14605207	.	-	2	Parent=comp142870_c1_seq1.mrna2;Target=comp142870_c1_seq1 25 158 +
ChrX	stalkie_big_nohaplotig	CDS	14606601	14606622	.	-	0	Parent=comp142870_c1_seq1.mrna2;Target=comp142870_c1_seq1 3 24 +
ChrX	gffcl	locus	14608754	14609099	.	-	.	ID=RLOC_00000845;geneIDs=comp106470_c0_seq1.path1;transcripts=comp106470_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14608754	14609099	.	-	.	ID=comp106470_c0_seq1.mrna1;geneID=comp106470_c0_seq1.path1;Name=comp106470_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.6;matches=341;mismatches=4;indels=1;unknowns=0;Target=comp106470_c0_seq1 345 1 .;CDS_Target=comp106470_c0_seq1 12 1 .;locus=RLOC_00000845
ChrX	stalkie_big_nohaplotig	exon	14608754	14609099	98	-	.	Parent=comp106470_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14609087	14609099	.	-	0	Parent=comp106470_c0_seq1.mrna1
ChrX	gffcl	locus	14614140	14617570	.	-	.	ID=RLOC_00000846;geneIDs=comp155365_c0_seq1.path1;transcripts=comp155365_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14614140	14617570	.	-	.	ID=comp155365_c0_seq1.mrna1;geneID=comp155365_c0_seq1.path1;Name=comp155365_c0_seq1;Dir=indeterminatecoverage=90.6;identity=96.7;matches=2050;mismatches=27;indels=42;unknowns=0;Target=comp155365_c0_seq1 2292 2158 .;locus=RLOC_00000846
ChrX	stalkie_big_nohaplotig	exon	14614140	14615122	98	-	.	Parent=comp155365_c0_seq1.mrna1;Target=comp155365_c0_seq1 2294 1311 .
ChrX	stalkie_big_nohaplotig	exon	14616436	14617570	94	-	.	Parent=comp155365_c0_seq1.mrna1;Target=comp155365_c0_seq1 1310 217 .
ChrX	stalkie_big_nohaplotig	CDS	14614142	14614276	.	-	0	Parent=comp155365_c0_seq1.mrna1
ChrX	gffcl	locus	14617826	14618416	.	-	.	ID=RLOC_00000847;geneIDs=comp48619_c0_seq1.path1;transcripts=comp48619_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14617826	14618416	.	-	.	ID=comp48619_c0_seq1.mrna1;geneID=comp48619_c0_seq1.path1;Name=comp48619_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=580;mismatches=10;indels=2;unknowns=0;Target=comp48619_c0_seq1 591 1 .;CDS_Target=comp48619_c0_seq1 522 370 .;locus=RLOC_00000847
ChrX	stalkie_big_nohaplotig	exon	14617826	14618416	97	-	.	Parent=comp48619_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14617895	14618047	.	-	0	Parent=comp48619_c0_seq1.mrna1
ChrX	gffcl	locus	14618465	14618971	.	-	.	ID=RLOC_00000848;geneIDs=comp145936_c0_seq1.path1;transcripts=comp145936_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14618465	14618971	.	-	.	ID=comp145936_c0_seq1.mrna1;geneID=comp145936_c0_seq1.path1;Name=comp145936_c0_seq1;Dir=indeterminatecoverage=98.3;identity=100.0;matches=507;mismatches=0;indels=0;unknowns=0;Target=comp145936_c0_seq1 516 10 .;CDS_Target=comp145936_c0_seq1 178 92 .;locus=RLOC_00000848
ChrX	stalkie_big_nohaplotig	exon	14618465	14618971	100	-	.	Parent=comp145936_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14618803	14618889	.	-	0	Parent=comp145936_c0_seq1.mrna1
ChrX	gffcl	locus	14620455	14621576	.	-	.	ID=RLOC_00000849;geneIDs=comp157428_c0_seq1.path1;transcripts=comp157428_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14620455	14621576	.	-	.	ID=comp157428_c0_seq1.mrna1;geneID=comp157428_c0_seq1.path1;Name=comp157428_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1120;mismatches=2;indels=0;unknowns=0;Target=comp157428_c0_seq1 1122 1 .;CDS_Target=comp157428_c0_seq1 903 724 .;locus=RLOC_00000849
ChrX	stalkie_big_nohaplotig	exon	14620455	14621576	99	-	.	Parent=comp157428_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14620674	14620853	.	-	0	Parent=comp157428_c0_seq1.mrna1
ChrX	gffcl	locus	14634146	14636526	.	+	.	ID=RLOC_00000850;geneIDs=FBgn0035265.1.path1;transcripts=FBgn0035265.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14634146	14636526	.	+	.	ID=FBgn0035265.1.mrna1;geneID=FBgn0035265.1.path1;Name=FBgn0035265.1;Dir=sensecoverage=100.0;identity=99.4;matches=1533;mismatches=9;indels=0;unknowns=0;locus=RLOC_00000850
ChrX	stalkie_big_nohaplotig	exon	14634146	14635010	99	+	.	Parent=FBgn0035265.1.mrna1;Target=FBgn0035265.1 1 865 +
ChrX	stalkie_big_nohaplotig	exon	14635850	14636526	99	+	.	Parent=FBgn0035265.1.mrna1;Target=FBgn0035265.1 866 1542 +
ChrX	stalkie_big_nohaplotig	CDS	14634146	14635010	.	+	0	Parent=FBgn0035265.1.mrna1;Target=FBgn0035265.1 1 865 +
ChrX	stalkie_big_nohaplotig	CDS	14635850	14636526	.	+	2	Parent=FBgn0035265.1.mrna1;Target=FBgn0035265.1 866 1542 +
ChrX	gffcl	locus	14642081	14643339	.	+	.	ID=RLOC_00000851;geneIDs=comp135762_c0_seq1.path1;transcripts=comp135762_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14642081	14643339	.	+	.	ID=comp135762_c0_seq1.mrna1;geneID=comp135762_c0_seq1.path1;Name=comp135762_c0_seq1;Dir=sensecoverage=96.8;identity=99.6;matches=1068;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000851
ChrX	stalkie_big_nohaplotig	exon	14642081	14642620	99	+	.	Parent=comp135762_c0_seq1.mrna1;Target=comp135762_c0_seq1 16 555 +
ChrX	stalkie_big_nohaplotig	exon	14642808	14643339	99	+	.	Parent=comp135762_c0_seq1.mrna1;Target=comp135762_c0_seq1 556 1087 +
ChrX	stalkie_big_nohaplotig	CDS	14642332	14642620	.	+	0	Parent=comp135762_c0_seq1.mrna1;Target=comp135762_c0_seq1 267 555 +
ChrX	stalkie_big_nohaplotig	CDS	14642808	14643244	.	+	2	Parent=comp135762_c0_seq1.mrna1;Target=comp135762_c0_seq1 556 992 +
ChrX	gffcl	locus	14681841	14683002	.	-	.	ID=RLOC_00000852;geneIDs=comp161796_c1_seq1.path1;transcripts=comp161796_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14681841	14683002	.	-	.	ID=comp161796_c1_seq1.mrna1;geneID=comp161796_c1_seq1.path1;Name=comp161796_c1_seq1;Dir=indeterminatecoverage=97.9;identity=94.9;matches=1126;mismatches=34;indels=26;unknowns=0;Target=comp161796_c1_seq1 1185 2 .;CDS_Target=comp161796_c1_seq1 714 589 .;locus=RLOC_00000852
ChrX	stalkie_big_nohaplotig	exon	14681841	14683002	94	-	.	Parent=comp161796_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14682307	14682420	.	-	0	Parent=comp161796_c1_seq1.mrna1
ChrX	gffcl	locus	14707345	14708153	.	-	.	ID=RLOC_00000853;geneIDs=comp137080_c0_seq1.path2;transcripts=comp137080_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	14707345	14708153	.	-	.	ID=comp137080_c0_seq1.mrna2;geneID=comp137080_c0_seq1.path2;Name=comp137080_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=807;mismatches=2;indels=0;unknowns=0;Target=comp137080_c0_seq1 809 1 .;CDS_Target=comp137080_c0_seq1 41 3 .;locus=RLOC_00000853
ChrX	stalkie_big_nohaplotig	exon	14707345	14708153	99	-	.	Parent=comp137080_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	14708113	14708151	.	-	0	Parent=comp137080_c0_seq1.mrna2
ChrX	gffcl	locus	14725937	14726627	.	-	.	ID=RLOC_00000854;geneIDs=comp131251_c0_seq1.path1;transcripts=comp131251_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14725937	14726627	.	-	.	ID=comp131251_c0_seq1.mrna1;geneID=comp131251_c0_seq1.path1;Name=comp131251_c0_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=691;mismatches=0;indels=0;unknowns=0;Target=comp131251_c0_seq1 691 1 .;CDS_Target=comp131251_c0_seq1 573 172 .;locus=RLOC_00000854
ChrX	stalkie_big_nohaplotig	exon	14725937	14726627	100	-	.	Parent=comp131251_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14726055	14726456	.	-	0	Parent=comp131251_c0_seq1.mrna1
ChrX	gffcl	locus	14738102	14743902	.	+	.	ID=RLOC_00000855;geneIDs=FBgn0031424.1.path1;transcripts=FBgn0031424.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14738102	14743902	.	+	.	ID=FBgn0031424.1.mrna1;geneID=FBgn0031424.1.path1;Name=FBgn0031424.1;Dir=sensecoverage=95.8;identity=99.8;matches=1804;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000855
ChrX	stalkie_big_nohaplotig	exon	14738102	14738426	100	+	.	Parent=FBgn0031424.1.mrna1;Target=FBgn0031424.1 81 405 +
ChrX	stalkie_big_nohaplotig	exon	14740485	14740721	100	+	.	Parent=FBgn0031424.1.mrna1;Target=FBgn0031424.1 406 642 +
ChrX	stalkie_big_nohaplotig	exon	14741545	14741738	100	+	.	Parent=FBgn0031424.1.mrna1;Target=FBgn0031424.1 643 836 +
ChrX	stalkie_big_nohaplotig	exon	14741810	14742269	100	+	.	Parent=FBgn0031424.1.mrna1;Target=FBgn0031424.1 837 1296 +
ChrX	stalkie_big_nohaplotig	exon	14742334	14742519	99	+	.	Parent=FBgn0031424.1.mrna1;Target=FBgn0031424.1 1297 1482 +
ChrX	stalkie_big_nohaplotig	exon	14742586	14742789	99	+	.	Parent=FBgn0031424.1.mrna1;Target=FBgn0031424.1 1483 1686 +
ChrX	stalkie_big_nohaplotig	exon	14743702	14743902	99	+	.	Parent=FBgn0031424.1.mrna1;Target=FBgn0031424.1 1687 1887 +
ChrX	stalkie_big_nohaplotig	CDS	14738103	14738426	.	+	0	Parent=FBgn0031424.1.mrna1;Target=FBgn0031424.1 82 405 +
ChrX	stalkie_big_nohaplotig	CDS	14740485	14740721	.	+	0	Parent=FBgn0031424.1.mrna1;Target=FBgn0031424.1 406 642 +
ChrX	stalkie_big_nohaplotig	CDS	14741545	14741738	.	+	0	Parent=FBgn0031424.1.mrna1;Target=FBgn0031424.1 643 836 +
ChrX	stalkie_big_nohaplotig	CDS	14741810	14742269	.	+	1	Parent=FBgn0031424.1.mrna1;Target=FBgn0031424.1 837 1296 +
ChrX	stalkie_big_nohaplotig	CDS	14742334	14742519	.	+	0	Parent=FBgn0031424.1.mrna1;Target=FBgn0031424.1 1297 1482 +
ChrX	stalkie_big_nohaplotig	CDS	14742586	14742789	.	+	0	Parent=FBgn0031424.1.mrna1;Target=FBgn0031424.1 1483 1686 +
ChrX	stalkie_big_nohaplotig	CDS	14743702	14743902	.	+	0	Parent=FBgn0031424.1.mrna1;Target=FBgn0031424.1 1687 1887 +
ChrX	gffcl	locus	14748903	14749515	.	-	.	ID=RLOC_00000856;geneIDs=comp149301_c1_seq1.path1;transcripts=comp149301_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14748903	14749515	.	-	.	ID=comp149301_c1_seq1.mrna1;geneID=comp149301_c1_seq1.path1;Name=comp149301_c1_seq1;Dir=indeterminatecoverage=97.3;identity=99.0;matches=607;mismatches=6;indels=0;unknowns=0;Target=comp149301_c1_seq1 630 18 .;CDS_Target=comp149301_c1_seq1 339 202 .;locus=RLOC_00000856
ChrX	stalkie_big_nohaplotig	exon	14748903	14749515	99	-	.	Parent=comp149301_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14749194	14749331	.	-	0	Parent=comp149301_c1_seq1.mrna1
ChrX	gffcl	locus	14750132	14752838	.	+	.	ID=RLOC_00000857;geneIDs=comp156410_c0_seq1.path1;transcripts=comp156410_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14750132	14752838	.	+	.	ID=comp156410_c0_seq1.mrna1;geneID=comp156410_c0_seq1.path1;Name=comp156410_c0_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=1626;mismatches=12;indels=0;unknowns=0;locus=RLOC_00000857
ChrX	stalkie_big_nohaplotig	exon	14750132	14751367	99	+	.	Parent=comp156410_c0_seq1.mrna1;Target=comp156410_c0_seq1 403 1638 -
ChrX	stalkie_big_nohaplotig	exon	14752437	14752838	99	+	.	Parent=comp156410_c0_seq1.mrna1;Target=comp156410_c0_seq1 1 402 -
ChrX	stalkie_big_nohaplotig	CDS	14751307	14751367	.	+	0	Parent=comp156410_c0_seq1.mrna1;Target=comp156410_c0_seq1 403 463 .
ChrX	stalkie_big_nohaplotig	CDS	14752437	14752477	.	+	2	Parent=comp156410_c0_seq1.mrna1;Target=comp156410_c0_seq1 362 402 .
ChrX	gffcl	locus	14753555	14753879	.	+	.	ID=RLOC_00000858;geneIDs=comp117974_c0_seq1.path1;transcripts=comp117974_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14753555	14753879	.	+	.	ID=comp117974_c0_seq1.mrna1;geneID=comp117974_c0_seq1.path1;Name=comp117974_c0_seq1;Dir=indeterminatecoverage=99.3;identity=91.1;matches=296;mismatches=0;indels=29;unknowns=0;Target=comp117974_c0_seq1 296 1 .;CDS_Target=comp117974_c0_seq1 209 162 .;locus=RLOC_00000858
ChrX	stalkie_big_nohaplotig	exon	14753555	14753879	91	+	.	Parent=comp117974_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14753716	14753763	.	+	0	Parent=comp117974_c0_seq1.mrna1
ChrX	gffcl	locus	14755003	14756947	.	-	.	ID=RLOC_00000859;geneIDs=comp156452_c0_seq1.path1;transcripts=comp156452_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14755003	14756947	.	-	.	ID=comp156452_c0_seq1.mrna1;geneID=comp156452_c0_seq1.path1;Name=comp156452_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.6;matches=1937;mismatches=8;indels=0;unknowns=0;Target=comp156452_c0_seq1 1950 6 .;CDS_Target=comp156452_c0_seq1 1497 1480 .;locus=RLOC_00000859
ChrX	stalkie_big_nohaplotig	exon	14755003	14756947	99	-	.	Parent=comp156452_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14755456	14755473	.	-	0	Parent=comp156452_c0_seq1.mrna1
ChrX	gffcl	locus	14758506	14777712	.	-	.	ID=RLOC_00000860;geneIDs=FBgn0031426.1.path1,comp149747_c2_seq1.path1;transcripts=FBgn0031426.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14758749	14777712	.	-	.	ID=FBgn0031426.1.mrna1;geneID=FBgn0031426.1.path1;Name=FBgn0031426.1;Dir=sensecoverage=99.3;identity=99.9;matches=1179;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000860
ChrX	stalkie_big_nohaplotig	exon	14758749	14758860	100	-	.	Parent=FBgn0031426.1.mrna1;Target=FBgn0031426.1 1077 1188 +
ChrX	stalkie_big_nohaplotig	exon	14758939	14759107	99	-	.	Parent=FBgn0031426.1.mrna1;Target=FBgn0031426.1 908 1076 +
ChrX	stalkie_big_nohaplotig	exon	14759164	14759877	100	-	.	Parent=FBgn0031426.1.mrna1;Target=FBgn0031426.1 194 907 +
ChrX	stalkie_big_nohaplotig	exon	14777528	14777712	100	-	.	Parent=FBgn0031426.1.mrna1;Target=FBgn0031426.1 9 193 +
ChrX	stalkie_big_nohaplotig	CDS	14758749	14758860	.	-	1	Parent=FBgn0031426.1.mrna1;Target=FBgn0031426.1 1077 1188 +
ChrX	stalkie_big_nohaplotig	CDS	14758939	14759107	.	-	2	Parent=FBgn0031426.1.mrna1;Target=FBgn0031426.1 908 1076 +
ChrX	stalkie_big_nohaplotig	CDS	14759164	14759877	.	-	2	Parent=FBgn0031426.1.mrna1;Target=FBgn0031426.1 194 907 +
ChrX	stalkie_big_nohaplotig	CDS	14777528	14777711	.	-	0	Parent=FBgn0031426.1.mrna1;Target=FBgn0031426.1 10 193 +
ChrX	gffcl	locus	14799539	16760325	.	.	.	ID=RLOC_00000861;geneIDs=ORF298.path1,comp150041_c0_seq1.path1,comp158805_c0_seq1.path1,comp161338_c1_seq1.path1;transcripts=comp161338_c1_seq1.mrna1,comp158805_c0_seq1.mrna1,ORF298.mrna1,comp150041_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14799539	16760325	.	+	.	ID=comp161338_c1_seq1.mrna1;geneID=comp161338_c1_seq1.path1;Name=comp161338_c1_seq1;Dir=indeterminatecoverage=99.8;identity=92.2;matches=2257;mismatches=96;indels=95;unknowns=0;Target=comp161338_c1_seq1 427 230 .;locus=RLOC_00000861
ChrX	stalkie_big_nohaplotig	exon	14799539	14800967	99	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1429 1 .
ChrX	stalkie_big_nohaplotig	exon	14812139	14812144	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1435 1430 .
ChrX	stalkie_big_nohaplotig	exon	14812444	14812447	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1439 1436 .
ChrX	stalkie_big_nohaplotig	exon	14819044	14819058	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1454 1440 .
ChrX	stalkie_big_nohaplotig	exon	14823448	14823460	50	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1505 1482 .
ChrX	stalkie_big_nohaplotig	exon	14827991	14827997	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1512 1506 .
ChrX	stalkie_big_nohaplotig	exon	14830137	14830141	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1517 1513 .
ChrX	stalkie_big_nohaplotig	exon	14836231	14836233	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1520 1518 .
ChrX	stalkie_big_nohaplotig	exon	14839886	14839892	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1527 1521 .
ChrX	stalkie_big_nohaplotig	exon	14844692	14844702	72	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1538 1528 .
ChrX	stalkie_big_nohaplotig	exon	14844808	14844811	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1542 1539 .
ChrX	stalkie_big_nohaplotig	exon	14874553	14874558	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1548 1543 .
ChrX	stalkie_big_nohaplotig	exon	14878985	14879054	55	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1610 1549 .
ChrX	stalkie_big_nohaplotig	exon	14879960	14879980	81	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1632 1611 .
ChrX	stalkie_big_nohaplotig	exon	14880548	14880566	78	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1648 1633 .
ChrX	stalkie_big_nohaplotig	exon	14887185	14887188	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1659 1656 .
ChrX	stalkie_big_nohaplotig	exon	14890437	14890448	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1671 1660 .
ChrX	stalkie_big_nohaplotig	exon	14892133	14892159	48	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1714 1672 .
ChrX	stalkie_big_nohaplotig	exon	14892864	14892868	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1719 1715 .
ChrX	stalkie_big_nohaplotig	exon	14898373	14898374	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1721 1720 .
ChrX	stalkie_big_nohaplotig	exon	14903963	14903981	85	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1742 1722 .
ChrX	stalkie_big_nohaplotig	exon	16292108	16292114	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1749 1743 .
ChrX	stalkie_big_nohaplotig	exon	16295933	16295943	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1767 1757 .
ChrX	stalkie_big_nohaplotig	exon	16297692	16297711	55	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1778 1768 .
ChrX	stalkie_big_nohaplotig	exon	16299491	16299499	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1787 1779 .
ChrX	stalkie_big_nohaplotig	exon	16299521	16299528	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1834 1827 .
ChrX	stalkie_big_nohaplotig	exon	16300821	16300825	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1846 1842 .
ChrX	stalkie_big_nohaplotig	exon	16303734	16303738	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1851 1847 .
ChrX	stalkie_big_nohaplotig	exon	16307782	16307791	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1861 1852 .
ChrX	stalkie_big_nohaplotig	exon	16315749	16315751	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1870 1868 .
ChrX	stalkie_big_nohaplotig	exon	16329185	16329196	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1882 1871 .
ChrX	stalkie_big_nohaplotig	exon	16329263	16329272	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1951 1942 .
ChrX	stalkie_big_nohaplotig	exon	16352827	16352854	46	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1979 1967 .
ChrX	stalkie_big_nohaplotig	exon	16358603	16358605	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1982 1980 .
ChrX	stalkie_big_nohaplotig	exon	16362804	16362807	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1986 1983 .
ChrX	stalkie_big_nohaplotig	exon	16367804	16367810	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 1993 1987 .
ChrX	stalkie_big_nohaplotig	exon	16370072	16370079	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2001 1994 .
ChrX	stalkie_big_nohaplotig	exon	16371090	16371095	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2007 2002 .
ChrX	stalkie_big_nohaplotig	exon	16377549	16377551	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2010 2008 .
ChrX	stalkie_big_nohaplotig	exon	16383559	16383566	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2018 2011 .
ChrX	stalkie_big_nohaplotig	exon	16385067	16385071	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2023 2019 .
ChrX	stalkie_big_nohaplotig	exon	16387948	16387955	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2031 2024 .
ChrX	stalkie_big_nohaplotig	exon	16387959	16387962	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2058 2055 .
ChrX	stalkie_big_nohaplotig	exon	16389593	16389602	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2068 2059 .
ChrX	stalkie_big_nohaplotig	exon	16397249	16397251	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2078 2076 .
ChrX	stalkie_big_nohaplotig	exon	16410434	16410445	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2091 2080 .
ChrX	stalkie_big_nohaplotig	exon	16452653	16452660	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2153 2146 .
ChrX	stalkie_big_nohaplotig	exon	16458314	16458323	90	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2163 2154 .
ChrX	stalkie_big_nohaplotig	exon	16459437	16459448	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2175 2164 .
ChrX	stalkie_big_nohaplotig	exon	16470434	16470442	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2205 2197 .
ChrX	stalkie_big_nohaplotig	exon	16487700	16487702	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2241 2239 .
ChrX	stalkie_big_nohaplotig	exon	16488759	16488765	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2248 2242 .
ChrX	stalkie_big_nohaplotig	exon	16488792	16488799	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2303 2296 .
ChrX	stalkie_big_nohaplotig	exon	16489720	16489726	85	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2310 2304 .
ChrX	stalkie_big_nohaplotig	exon	16494198	16494200	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2313 2311 .
ChrX	stalkie_big_nohaplotig	exon	16500781	16500785	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2318 2314 .
ChrX	stalkie_big_nohaplotig	exon	16504340	16504355	93	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2334 2319 .
ChrX	stalkie_big_nohaplotig	exon	16521235	16521250	75	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2350 2335 .
ChrX	stalkie_big_nohaplotig	exon	16527280	16527292	84	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2363 2351 .
ChrX	stalkie_big_nohaplotig	exon	16537462	16537464	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2366 2364 .
ChrX	stalkie_big_nohaplotig	exon	16550799	16550806	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2374 2367 .
ChrX	stalkie_big_nohaplotig	exon	16555077	16555079	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2377 2375 .
ChrX	stalkie_big_nohaplotig	exon	16557762	16557765	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2381 2378 .
ChrX	stalkie_big_nohaplotig	exon	16563237	16563238	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2383 2382 .
ChrX	stalkie_big_nohaplotig	exon	16568565	16568570	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2389 2384 .
ChrX	stalkie_big_nohaplotig	exon	16570579	16570584	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2395 2390 .
ChrX	stalkie_big_nohaplotig	exon	16573349	16573355	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2402 2396 .
ChrX	stalkie_big_nohaplotig	exon	16573853	16573862	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2412 2403 .
ChrX	stalkie_big_nohaplotig	exon	16578507	16578516	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2459 2450 .
ChrX	stalkie_big_nohaplotig	exon	16578518	16578525	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2483 2476 .
ChrX	stalkie_big_nohaplotig	exon	16579435	16579455	57	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2499 2486 .
ChrX	stalkie_big_nohaplotig	exon	16587723	16587789	50	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2569 2500 .
ChrX	stalkie_big_nohaplotig	exon	16589099	16589101	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2572 2570 .
ChrX	stalkie_big_nohaplotig	exon	16599714	16599722	77	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2581 2573 .
ChrX	stalkie_big_nohaplotig	exon	16602102	16602115	92	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2595 2582 .
ChrX	stalkie_big_nohaplotig	exon	16614958	16614967	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2653 2644 .
ChrX	stalkie_big_nohaplotig	exon	16658908	16658934	56	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2752 2709 .
ChrX	stalkie_big_nohaplotig	exon	16662774	16662795	77	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2771 2753 .
ChrX	stalkie_big_nohaplotig	exon	16665159	16665172	78	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2785 2772 .
ChrX	stalkie_big_nohaplotig	exon	16666459	16666460	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2787 2786 .
ChrX	stalkie_big_nohaplotig	exon	16668059	16668068	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2797 2788 .
ChrX	stalkie_big_nohaplotig	exon	16673064	16673074	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2829 2819 .
ChrX	stalkie_big_nohaplotig	exon	16675845	16675853	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2838 2830 .
ChrX	stalkie_big_nohaplotig	exon	16676898	16676904	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2845 2839 .
ChrX	stalkie_big_nohaplotig	exon	16686177	16686178	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2847 2846 .
ChrX	stalkie_big_nohaplotig	exon	16690920	16690923	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2851 2848 .
ChrX	stalkie_big_nohaplotig	exon	16697752	16697768	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2868 2852 .
ChrX	stalkie_big_nohaplotig	exon	16717210	16717212	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2892 2890 .
ChrX	stalkie_big_nohaplotig	exon	16722852	16722861	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2902 2893 .
ChrX	stalkie_big_nohaplotig	exon	16729739	16729742	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2906 2903 .
ChrX	stalkie_big_nohaplotig	exon	16743195	16743196	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2908 2907 .
ChrX	stalkie_big_nohaplotig	exon	16749276	16749280	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2913 2909 .
ChrX	stalkie_big_nohaplotig	exon	16754552	16754558	100	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2920 2914 .
ChrX	stalkie_big_nohaplotig	exon	16760300	16760325	96	+	.	Parent=comp161338_c1_seq1.mrna1;Target=comp161338_c1_seq1 2946 2921 .
ChrX	stalkie_big_nohaplotig	CDS	14799768	14799965	.	+	0	Parent=comp161338_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14838556	14841862	.	-	.	ID=comp158805_c0_seq1.mrna1;geneID=comp158805_c0_seq1.path1;Name=comp158805_c0_seq1;Dir=indeterminatecoverage=99.5;identity=98.9;matches=3293;mismatches=14;indels=21;unknowns=0;Target=comp158805_c0_seq1 3329 2 .;CDS_Target=comp158805_c0_seq1 2547 2188 .;locus=RLOC_00000861
ChrX	stalkie_big_nohaplotig	exon	14838556	14841862	98	-	.	Parent=comp158805_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14839332	14839691	.	-	0	Parent=comp158805_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16389017	16394031	.	+	.	ID=ORF298.mrna1;geneID=ORF298.path1;Name=ORF298;Dir=sensecoverage=100.0;identity=99.6;matches=2103;mismatches=9;indels=0;unknowns=0;locus=RLOC_00000861
ChrX	stalkie_big_nohaplotig	exon	16389017	16389611	99	+	.	Parent=ORF298.mrna1;Target=ORF298 1 595 +
ChrX	stalkie_big_nohaplotig	exon	16392515	16394031	99	+	.	Parent=ORF298.mrna1;Target=ORF298 596 2112 +
ChrX	stalkie_big_nohaplotig	CDS	16389017	16389611	.	+	0	Parent=ORF298.mrna1;Target=ORF298 1 595 +
ChrX	stalkie_big_nohaplotig	CDS	16392515	16394031	.	+	2	Parent=ORF298.mrna1;Target=ORF298 596 2112 +
ChrX	stalkie_big_nohaplotig	mRNA	16562623	16564018	.	-	.	ID=comp150041_c0_seq1.mrna1;geneID=comp150041_c0_seq1.path1;Name=comp150041_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1394;mismatches=2;indels=1;unknowns=0;Target=comp150041_c0_seq1 1397 1 .;CDS_Target=comp150041_c0_seq1 629 507 .;locus=RLOC_00000861
ChrX	stalkie_big_nohaplotig	exon	16562623	16564018	99	-	.	Parent=comp150041_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16563390	16563512	.	-	0	Parent=comp150041_c0_seq1.mrna1
ChrX	gffcl	locus	14803301	14805454	.	-	.	ID=RLOC_00000862;geneIDs=comp162750_c3_seq1.path1;transcripts=comp162750_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14803301	14805454	.	-	.	ID=comp162750_c3_seq1.mrna1;geneID=comp162750_c3_seq1.path1;Name=comp162750_c3_seq1;Dir=antisensecoverage=97.2;identity=92.9;matches=1755;mismatches=79;indels=56;unknowns=0;locus=RLOC_00000862
ChrX	stalkie_big_nohaplotig	exon	14803301	14803373	87	-	.	Parent=comp162750_c3_seq1.mrna1;Target=comp162750_c3_seq1 54 128 -
ChrX	stalkie_big_nohaplotig	exon	14803456	14804333	92	-	.	Parent=comp162750_c3_seq1.mrna1;Target=comp162750_c3_seq1 129 1001 -
ChrX	stalkie_big_nohaplotig	exon	14804534	14805454	94	-	.	Parent=comp162750_c3_seq1.mrna1;Target=comp162750_c3_seq1 1002 1905 -
ChrX	stalkie_big_nohaplotig	CDS	14803903	14804333	.	-	2	Parent=comp162750_c3_seq1.mrna1;Target=comp162750_c3_seq1 571 1001 .
ChrX	stalkie_big_nohaplotig	CDS	14804534	14804771	.	-	0	Parent=comp162750_c3_seq1.mrna1;Target=comp162750_c3_seq1 1002 1239 .
ChrX	gffcl	locus	14841897	14843071	.	-	.	ID=RLOC_00000863;geneIDs=comp151014_c0_seq1.path1;transcripts=comp151014_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14841897	14843071	.	-	.	ID=comp151014_c0_seq1.mrna1;geneID=comp151014_c0_seq1.path1;Name=comp151014_c0_seq1;Dir=indeterminatecoverage=98.5;identity=98.8;matches=1165;mismatches=9;indels=5;unknowns=0;Target=comp151014_c0_seq1 1178 1 .;CDS_Target=comp151014_c0_seq1 700 602 .;locus=RLOC_00000863
ChrX	stalkie_big_nohaplotig	exon	14841897	14843071	98	-	.	Parent=comp151014_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	14842376	14842474	.	-	0	Parent=comp151014_c0_seq1.mrna1
ChrX	gffcl	locus	14849620	14858295	.	+	.	ID=RLOC_00000864;geneIDs=comp161163_c2_seq1.path1;transcripts=comp161163_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14849620	14858295	.	+	.	ID=comp161163_c2_seq1.mrna1;geneID=comp161163_c2_seq1.path1;Name=comp161163_c2_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=3308;mismatches=5;indels=0;unknowns=0;Target=comp161163_c2_seq1 634 1143 +;locus=RLOC_00000864
ChrX	stalkie_big_nohaplotig	exon	14849620	14849648	100	+	.	Parent=comp161163_c2_seq1.mrna1;Target=comp161163_c2_seq1 1 29 +
ChrX	stalkie_big_nohaplotig	exon	14853303	14853592	100	+	.	Parent=comp161163_c2_seq1.mrna1;Target=comp161163_c2_seq1 30 319 +
ChrX	stalkie_big_nohaplotig	exon	14854568	14855917	99	+	.	Parent=comp161163_c2_seq1.mrna1;Target=comp161163_c2_seq1 320 1669 +
ChrX	stalkie_big_nohaplotig	exon	14856652	14858295	99	+	.	Parent=comp161163_c2_seq1.mrna1;Target=comp161163_c2_seq1 1670 3313 +
ChrX	stalkie_big_nohaplotig	CDS	14854882	14855391	.	+	0	Parent=comp161163_c2_seq1.mrna1
ChrX	gffcl	locus	14904898	14969857	.	+	.	ID=RLOC_00000865;geneIDs=FBgn0000061.1.path1,comp160501_c2_seq1.path1;transcripts=comp160501_c2_seq1.mrna1,FBgn0000061.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	14904898	14969857	.	+	.	ID=comp160501_c2_seq1.mrna1;geneID=comp160501_c2_seq1.path1;Name=comp160501_c2_seq1;Dir=antisensecoverage=97.2;identity=99.9;matches=1505;mismatches=0;indels=1;unknowns=0;locus=RLOC_00000865
ChrX	stalkie_big_nohaplotig	exon	14904898	14905419	99	+	.	Parent=comp160501_c2_seq1.mrna1;Target=comp160501_c2_seq1 1028 1550 -
ChrX	stalkie_big_nohaplotig	exon	14953798	14954164	100	+	.	Parent=comp160501_c2_seq1.mrna1;Target=comp160501_c2_seq1 661 1027 -
ChrX	stalkie_big_nohaplotig	exon	14963790	14963835	100	+	.	Parent=comp160501_c2_seq1.mrna1;Target=comp160501_c2_seq1 615 660 -
ChrX	stalkie_big_nohaplotig	exon	14969110	14969372	100	+	.	Parent=comp160501_c2_seq1.mrna1;Target=comp160501_c2_seq1 352 614 -
ChrX	stalkie_big_nohaplotig	exon	14969551	14969857	100	+	.	Parent=comp160501_c2_seq1.mrna1;Target=comp160501_c2_seq1 45 351 -
ChrX	stalkie_big_nohaplotig	CDS	14953887	14954164	.	+	0	Parent=comp160501_c2_seq1.mrna1;Target=comp160501_c2_seq1 661 938 .
ChrX	stalkie_big_nohaplotig	CDS	14963790	14963835	.	+	1	Parent=comp160501_c2_seq1.mrna1;Target=comp160501_c2_seq1 615 660 .
ChrX	stalkie_big_nohaplotig	CDS	14969110	14969372	.	+	0	Parent=comp160501_c2_seq1.mrna1;Target=comp160501_c2_seq1 352 614 .
ChrX	stalkie_big_nohaplotig	CDS	14969551	14969857	.	+	1	Parent=comp160501_c2_seq1.mrna1;Target=comp160501_c2_seq1 45 351 .
ChrX	stalkie_big_nohaplotig	mRNA	14953884	14969844	.	+	.	ID=FBgn0000061.1.mrna1;geneID=FBgn0000061.1.path1;Name=FBgn0000061.1;Dir=sensecoverage=94.0;identity=100.0;matches=869;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000865
ChrX	stalkie_big_nohaplotig	exon	14953884	14954164	100	+	.	Parent=FBgn0000061.1.mrna1;Target=FBgn0000061.1 1 281 +
ChrX	stalkie_big_nohaplotig	exon	14963790	14963835	100	+	.	Parent=FBgn0000061.1.mrna1;Target=FBgn0000061.1 282 327 +
ChrX	stalkie_big_nohaplotig	exon	14969110	14969372	100	+	.	Parent=FBgn0000061.1.mrna1;Target=FBgn0000061.1 328 590 +
ChrX	stalkie_big_nohaplotig	exon	14969566	14969844	100	+	.	Parent=FBgn0000061.1.mrna1;Target=FBgn0000061.1 591 869 +
ChrX	stalkie_big_nohaplotig	CDS	14953884	14954164	.	+	0	Parent=FBgn0000061.1.mrna1;Target=FBgn0000061.1 1 281 +
ChrX	stalkie_big_nohaplotig	CDS	14963790	14963835	.	+	1	Parent=FBgn0000061.1.mrna1;Target=FBgn0000061.1 282 327 +
ChrX	stalkie_big_nohaplotig	CDS	14969110	14969372	.	+	0	Parent=FBgn0000061.1.mrna1;Target=FBgn0000061.1 328 590 +
ChrX	stalkie_big_nohaplotig	CDS	14969566	14969844	.	+	1	Parent=FBgn0000061.1.mrna1;Target=FBgn0000061.1 591 869 +
ChrX	gffcl	locus	15002620	15004045	.	-	.	ID=RLOC_00000866;geneIDs=comp158386_c0_seq1.path1;transcripts=comp158386_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15002620	15004045	.	-	.	ID=comp158386_c0_seq1.mrna1;geneID=comp158386_c0_seq1.path1;Name=comp158386_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1420;mismatches=6;indels=0;unknowns=0;Target=comp158386_c0_seq1 1426 1 .;CDS_Target=comp158386_c0_seq1 1214 1083 .;locus=RLOC_00000866
ChrX	stalkie_big_nohaplotig	exon	15002620	15004045	99	-	.	Parent=comp158386_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15002832	15002963	.	-	0	Parent=comp158386_c0_seq1.mrna1
ChrX	gffcl	locus	15005462	15005682	.	-	.	ID=RLOC_00000867;geneIDs=comp140402_c0_seq1.path1;transcripts=comp140402_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15005462	15005682	.	-	.	ID=comp140402_c0_seq1.mrna1;geneID=comp140402_c0_seq1.path1;Name=comp140402_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=217;mismatches=4;indels=0;unknowns=0;Target=comp140402_c0_seq1 221 1 .;CDS_Target=comp140402_c0_seq1 77 15 .;locus=RLOC_00000867
ChrX	stalkie_big_nohaplotig	exon	15005462	15005682	98	-	.	Parent=comp140402_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15005606	15005668	.	-	0	Parent=comp140402_c0_seq1.mrna1
ChrX	gffcl	locus	15005694	15007408	.	+	.	ID=RLOC_00000868;geneIDs=comp163531_c1_seq1.path1;transcripts=comp163531_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15005694	15007408	.	+	.	ID=comp163531_c1_seq1.mrna1;geneID=comp163531_c1_seq1.path1;Name=comp163531_c1_seq1;Dir=indeterminatecoverage=63.6;identity=98.3;matches=1696;mismatches=17;indels=13;unknowns=0;Target=comp163531_c1_seq1 1724 1 .;CDS_Target=comp163531_c1_seq1 26 3 .;locus=RLOC_00000868
ChrX	stalkie_big_nohaplotig	exon	15005694	15007408	98	+	.	Parent=comp163531_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15005696	15005719	.	+	0	Parent=comp163531_c1_seq1.mrna1
ChrX	gffcl	locus	15009624	15048998	.	-	.	ID=RLOC_00000869;geneIDs=FBgn0032633.1.path1,comp159326_c0_seq1.path1;transcripts=FBgn0032633.1.mrna1,comp159326_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15009624	15048690	.	-	.	ID=FBgn0032633.1.mrna1;geneID=FBgn0032633.1.path1;Name=FBgn0032633.1;Dir=sensecoverage=100.0;identity=99.9;matches=2464;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000869
ChrX	stalkie_big_nohaplotig	exon	15009624	15009800	100	-	.	Parent=FBgn0032633.1.mrna1;Target=FBgn0032633.1 2290 2466 +
ChrX	stalkie_big_nohaplotig	exon	15026180	15026257	100	-	.	Parent=FBgn0032633.1.mrna1;Target=FBgn0032633.1 2212 2289 +
ChrX	stalkie_big_nohaplotig	exon	15026319	15026456	99	-	.	Parent=FBgn0032633.1.mrna1;Target=FBgn0032633.1 2074 2211 +
ChrX	stalkie_big_nohaplotig	exon	15026524	15026632	100	-	.	Parent=FBgn0032633.1.mrna1;Target=FBgn0032633.1 1965 2073 +
ChrX	stalkie_big_nohaplotig	exon	15026740	15027309	99	-	.	Parent=FBgn0032633.1.mrna1;Target=FBgn0032633.1 1395 1964 +
ChrX	stalkie_big_nohaplotig	exon	15027409	15027802	100	-	.	Parent=FBgn0032633.1.mrna1;Target=FBgn0032633.1 1001 1394 +
ChrX	stalkie_big_nohaplotig	exon	15029211	15029448	100	-	.	Parent=FBgn0032633.1.mrna1;Target=FBgn0032633.1 763 1000 +
ChrX	stalkie_big_nohaplotig	exon	15029526	15029662	100	-	.	Parent=FBgn0032633.1.mrna1;Target=FBgn0032633.1 626 762 +
ChrX	stalkie_big_nohaplotig	exon	15029791	15030168	100	-	.	Parent=FBgn0032633.1.mrna1;Target=FBgn0032633.1 248 625 +
ChrX	stalkie_big_nohaplotig	exon	15048444	15048690	100	-	.	Parent=FBgn0032633.1.mrna1;Target=FBgn0032633.1 1 247 +
ChrX	stalkie_big_nohaplotig	CDS	15009624	15009800	.	-	0	Parent=FBgn0032633.1.mrna1;Target=FBgn0032633.1 2290 2466 +
ChrX	stalkie_big_nohaplotig	CDS	15026180	15026257	.	-	0	Parent=FBgn0032633.1.mrna1;Target=FBgn0032633.1 2212 2289 +
ChrX	stalkie_big_nohaplotig	CDS	15026319	15026456	.	-	0	Parent=FBgn0032633.1.mrna1;Target=FBgn0032633.1 2074 2211 +
ChrX	stalkie_big_nohaplotig	CDS	15026524	15026632	.	-	1	Parent=FBgn0032633.1.mrna1;Target=FBgn0032633.1 1965 2073 +
ChrX	stalkie_big_nohaplotig	CDS	15026740	15027309	.	-	1	Parent=FBgn0032633.1.mrna1;Target=FBgn0032633.1 1395 1964 +
ChrX	stalkie_big_nohaplotig	CDS	15027409	15027802	.	-	2	Parent=FBgn0032633.1.mrna1;Target=FBgn0032633.1 1001 1394 +
ChrX	stalkie_big_nohaplotig	CDS	15029211	15029448	.	-	0	Parent=FBgn0032633.1.mrna1;Target=FBgn0032633.1 763 1000 +
ChrX	stalkie_big_nohaplotig	CDS	15029526	15029662	.	-	2	Parent=FBgn0032633.1.mrna1;Target=FBgn0032633.1 626 762 +
ChrX	stalkie_big_nohaplotig	CDS	15029791	15030168	.	-	2	Parent=FBgn0032633.1.mrna1;Target=FBgn0032633.1 248 625 +
ChrX	stalkie_big_nohaplotig	CDS	15048444	15048690	.	-	0	Parent=FBgn0032633.1.mrna1;Target=FBgn0032633.1 1 247 +
ChrX	stalkie_big_nohaplotig	mRNA	15021850	15048998	.	-	.	ID=comp159326_c0_seq1.mrna1;geneID=comp159326_c0_seq1.path1;Name=comp159326_c0_seq1;Dir=antisensecoverage=99.5;identity=99.9;matches=4489;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000869
ChrX	stalkie_big_nohaplotig	exon	15021850	15023744	99	-	.	Parent=comp159326_c0_seq1.mrna1;Target=comp159326_c0_seq1 1 1895 -
ChrX	stalkie_big_nohaplotig	exon	15026180	15026257	100	-	.	Parent=comp159326_c0_seq1.mrna1;Target=comp159326_c0_seq1 1896 1973 -
ChrX	stalkie_big_nohaplotig	exon	15026319	15026456	99	-	.	Parent=comp159326_c0_seq1.mrna1;Target=comp159326_c0_seq1 1974 2111 -
ChrX	stalkie_big_nohaplotig	exon	15026524	15026632	100	-	.	Parent=comp159326_c0_seq1.mrna1;Target=comp159326_c0_seq1 2112 2220 -
ChrX	stalkie_big_nohaplotig	exon	15026740	15027309	99	-	.	Parent=comp159326_c0_seq1.mrna1;Target=comp159326_c0_seq1 2221 2790 -
ChrX	stalkie_big_nohaplotig	exon	15027409	15027802	100	-	.	Parent=comp159326_c0_seq1.mrna1;Target=comp159326_c0_seq1 2791 3184 -
ChrX	stalkie_big_nohaplotig	exon	15029211	15029448	100	-	.	Parent=comp159326_c0_seq1.mrna1;Target=comp159326_c0_seq1 3185 3422 -
ChrX	stalkie_big_nohaplotig	exon	15029526	15029662	100	-	.	Parent=comp159326_c0_seq1.mrna1;Target=comp159326_c0_seq1 3423 3559 -
ChrX	stalkie_big_nohaplotig	exon	15029791	15030168	100	-	.	Parent=comp159326_c0_seq1.mrna1;Target=comp159326_c0_seq1 3560 3937 -
ChrX	stalkie_big_nohaplotig	exon	15048444	15048998	100	-	.	Parent=comp159326_c0_seq1.mrna1;Target=comp159326_c0_seq1 3938 4492 -
ChrX	stalkie_big_nohaplotig	CDS	15022263	15023744	.	-	0	Parent=comp159326_c0_seq1.mrna1;Target=comp159326_c0_seq1 414 1895 .
ChrX	stalkie_big_nohaplotig	CDS	15026180	15026257	.	-	0	Parent=comp159326_c0_seq1.mrna1;Target=comp159326_c0_seq1 1896 1973 .
ChrX	stalkie_big_nohaplotig	CDS	15026319	15026456	.	-	0	Parent=comp159326_c0_seq1.mrna1;Target=comp159326_c0_seq1 1974 2111 .
ChrX	stalkie_big_nohaplotig	CDS	15026524	15026632	.	-	1	Parent=comp159326_c0_seq1.mrna1;Target=comp159326_c0_seq1 2112 2220 .
ChrX	stalkie_big_nohaplotig	CDS	15026740	15027309	.	-	1	Parent=comp159326_c0_seq1.mrna1;Target=comp159326_c0_seq1 2221 2790 .
ChrX	stalkie_big_nohaplotig	CDS	15027409	15027802	.	-	2	Parent=comp159326_c0_seq1.mrna1;Target=comp159326_c0_seq1 2791 3184 .
ChrX	stalkie_big_nohaplotig	CDS	15029211	15029448	.	-	0	Parent=comp159326_c0_seq1.mrna1;Target=comp159326_c0_seq1 3185 3422 .
ChrX	stalkie_big_nohaplotig	CDS	15029526	15029662	.	-	2	Parent=comp159326_c0_seq1.mrna1;Target=comp159326_c0_seq1 3423 3559 .
ChrX	stalkie_big_nohaplotig	CDS	15029791	15030168	.	-	2	Parent=comp159326_c0_seq1.mrna1;Target=comp159326_c0_seq1 3560 3937 .
ChrX	stalkie_big_nohaplotig	CDS	15048444	15048648	.	-	0	Parent=comp159326_c0_seq1.mrna1;Target=comp159326_c0_seq1 3938 4142 .
ChrX	gffcl	locus	15016731	15017645	.	-	.	ID=RLOC_00000870;geneIDs=comp158457_c0_seq1.path1;transcripts=comp158457_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15016731	15017645	.	-	.	ID=comp158457_c0_seq1.mrna1;geneID=comp158457_c0_seq1.path1;Name=comp158457_c0_seq1;Dir=indeterminatecoverage=98.7;identity=98.5;matches=905;mismatches=10;indels=4;unknowns=0;Target=comp158457_c0_seq1 929 11 .;CDS_Target=comp158457_c0_seq1 231 76 .;locus=RLOC_00000870
ChrX	stalkie_big_nohaplotig	exon	15016731	15017645	98	-	.	Parent=comp158457_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15017425	15017580	.	-	0	Parent=comp158457_c0_seq1.mrna1
ChrX	gffcl	locus	15018960	15019934	.	+	.	ID=RLOC_00000871;geneIDs=comp154476_c0_seq1.path1;transcripts=comp154476_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15018960	15019934	.	+	.	ID=comp154476_c0_seq1.mrna1;geneID=comp154476_c0_seq1.path1;Name=comp154476_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=965;mismatches=10;indels=0;unknowns=0;Target=comp154476_c0_seq1 975 1 .;CDS_Target=comp154476_c0_seq1 543 424 .;locus=RLOC_00000871
ChrX	stalkie_big_nohaplotig	exon	15018960	15019934	98	+	.	Parent=comp154476_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15019383	15019502	.	+	0	Parent=comp154476_c0_seq1.mrna1
ChrX	gffcl	locus	15053584	15054058	.	-	.	ID=RLOC_00000872;geneIDs=comp136973_c0_seq1.path1;transcripts=comp136973_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15053584	15054058	.	-	.	ID=comp136973_c0_seq1.mrna1;geneID=comp136973_c0_seq1.path1;Name=comp136973_c0_seq1;Dir=indeterminatecoverage=98.5;identity=99.8;matches=474;mismatches=1;indels=0;unknowns=0;Target=comp136973_c0_seq1 478 4 .;CDS_Target=comp136973_c0_seq1 458 381 .;locus=RLOC_00000872
ChrX	stalkie_big_nohaplotig	exon	15053584	15054058	99	-	.	Parent=comp136973_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15053604	15053681	.	-	0	Parent=comp136973_c0_seq1.mrna1
ChrX	gffcl	locus	15056565	15057867	.	+	.	ID=RLOC_00000873;geneIDs=comp155382_c0_seq1.path1;transcripts=comp155382_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15056565	15057867	.	+	.	ID=comp155382_c0_seq1.mrna1;geneID=comp155382_c0_seq1.path1;Name=comp155382_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.8;matches=1295;mismatches=8;indels=8;unknowns=0;Target=comp155382_c0_seq1 1311 1 .;CDS_Target=comp155382_c0_seq1 1223 1062 .;locus=RLOC_00000873
ChrX	stalkie_big_nohaplotig	exon	15056565	15057867	98	+	.	Parent=comp155382_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15057618	15057779	.	+	0	Parent=comp155382_c0_seq1.mrna1
ChrX	gffcl	locus	15058433	15066871	.	-	.	ID=RLOC_00000874;geneIDs=FBgn0032341.1.path1;transcripts=FBgn0032341.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15058433	15066871	.	-	.	ID=FBgn0032341.1.mrna1;geneID=FBgn0032341.1.path1;Name=FBgn0032341.1;Dir=sensecoverage=100.0;identity=99.9;matches=3013;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000874
ChrX	stalkie_big_nohaplotig	exon	15058433	15059152	99	-	.	Parent=FBgn0032341.1.mrna1;Target=FBgn0032341.1 2296 3015 +
ChrX	stalkie_big_nohaplotig	exon	15059448	15059534	100	-	.	Parent=FBgn0032341.1.mrna1;Target=FBgn0032341.1 2209 2295 +
ChrX	stalkie_big_nohaplotig	exon	15059651	15060138	100	-	.	Parent=FBgn0032341.1.mrna1;Target=FBgn0032341.1 1721 2208 +
ChrX	stalkie_big_nohaplotig	exon	15060201	15060363	100	-	.	Parent=FBgn0032341.1.mrna1;Target=FBgn0032341.1 1558 1720 +
ChrX	stalkie_big_nohaplotig	exon	15061829	15062014	100	-	.	Parent=FBgn0032341.1.mrna1;Target=FBgn0032341.1 1372 1557 +
ChrX	stalkie_big_nohaplotig	exon	15062075	15062453	100	-	.	Parent=FBgn0032341.1.mrna1;Target=FBgn0032341.1 993 1371 +
ChrX	stalkie_big_nohaplotig	exon	15063377	15063678	99	-	.	Parent=FBgn0032341.1.mrna1;Target=FBgn0032341.1 691 992 +
ChrX	stalkie_big_nohaplotig	exon	15066108	15066575	100	-	.	Parent=FBgn0032341.1.mrna1;Target=FBgn0032341.1 223 690 +
ChrX	stalkie_big_nohaplotig	exon	15066650	15066871	100	-	.	Parent=FBgn0032341.1.mrna1;Target=FBgn0032341.1 1 222 +
ChrX	stalkie_big_nohaplotig	CDS	15058433	15059152	.	-	0	Parent=FBgn0032341.1.mrna1;Target=FBgn0032341.1 2296 3015 +
ChrX	stalkie_big_nohaplotig	CDS	15059448	15059534	.	-	0	Parent=FBgn0032341.1.mrna1;Target=FBgn0032341.1 2209 2295 +
ChrX	stalkie_big_nohaplotig	CDS	15059651	15060138	.	-	2	Parent=FBgn0032341.1.mrna1;Target=FBgn0032341.1 1721 2208 +
ChrX	stalkie_big_nohaplotig	CDS	15060201	15060363	.	-	0	Parent=FBgn0032341.1.mrna1;Target=FBgn0032341.1 1558 1720 +
ChrX	stalkie_big_nohaplotig	CDS	15061829	15062014	.	-	0	Parent=FBgn0032341.1.mrna1;Target=FBgn0032341.1 1372 1557 +
ChrX	stalkie_big_nohaplotig	CDS	15062075	15062453	.	-	1	Parent=FBgn0032341.1.mrna1;Target=FBgn0032341.1 993 1371 +
ChrX	stalkie_big_nohaplotig	CDS	15063377	15063678	.	-	0	Parent=FBgn0032341.1.mrna1;Target=FBgn0032341.1 691 992 +
ChrX	stalkie_big_nohaplotig	CDS	15066108	15066575	.	-	0	Parent=FBgn0032341.1.mrna1;Target=FBgn0032341.1 223 690 +
ChrX	stalkie_big_nohaplotig	CDS	15066650	15066871	.	-	0	Parent=FBgn0032341.1.mrna1;Target=FBgn0032341.1 1 222 +
ChrX	gffcl	locus	15071694	15077692	.	-	.	ID=RLOC_00000875;geneIDs=FBgn0261938.1.path1;transcripts=FBgn0261938.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15071694	15077692	.	-	.	ID=FBgn0261938.1.mrna1;geneID=FBgn0261938.1.path1;Name=FBgn0261938.1;Dir=sensecoverage=100.0;identity=99.9;matches=3956;mismatches=3;indels=1;unknowns=0;locus=RLOC_00000875
ChrX	stalkie_big_nohaplotig	exon	15071694	15072531	99	-	.	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 3122 3960 +
ChrX	stalkie_big_nohaplotig	exon	15072596	15072965	99	-	.	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 2752 3121 +
ChrX	stalkie_big_nohaplotig	exon	15073618	15073845	100	-	.	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 2524 2751 +
ChrX	stalkie_big_nohaplotig	exon	15073902	15074009	100	-	.	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 2416 2523 +
ChrX	stalkie_big_nohaplotig	exon	15074079	15074220	100	-	.	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 2274 2415 +
ChrX	stalkie_big_nohaplotig	exon	15074284	15074658	100	-	.	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 1899 2273 +
ChrX	stalkie_big_nohaplotig	exon	15074912	15075174	99	-	.	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 1636 1898 +
ChrX	stalkie_big_nohaplotig	exon	15075231	15075560	100	-	.	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 1306 1635 +
ChrX	stalkie_big_nohaplotig	exon	15075619	15076012	100	-	.	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 912 1305 +
ChrX	stalkie_big_nohaplotig	exon	15076098	15076241	100	-	.	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 768 911 +
ChrX	stalkie_big_nohaplotig	exon	15076815	15077211	100	-	.	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 371 767 +
ChrX	stalkie_big_nohaplotig	exon	15077273	15077419	100	-	.	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 224 370 +
ChrX	stalkie_big_nohaplotig	exon	15077470	15077692	100	-	.	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 1 223 +
ChrX	stalkie_big_nohaplotig	CDS	15071694	15072531	.	-	2	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 3122 3960 +
ChrX	stalkie_big_nohaplotig	CDS	15072596	15072965	.	-	0	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 2752 3121 +
ChrX	stalkie_big_nohaplotig	CDS	15073618	15073845	.	-	0	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 2524 2751 +
ChrX	stalkie_big_nohaplotig	CDS	15073902	15074009	.	-	0	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 2416 2523 +
ChrX	stalkie_big_nohaplotig	CDS	15074079	15074220	.	-	1	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 2274 2415 +
ChrX	stalkie_big_nohaplotig	CDS	15074284	15074658	.	-	1	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 1899 2273 +
ChrX	stalkie_big_nohaplotig	CDS	15074912	15075174	.	-	0	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 1636 1898 +
ChrX	stalkie_big_nohaplotig	CDS	15075231	15075560	.	-	0	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 1306 1635 +
ChrX	stalkie_big_nohaplotig	CDS	15075619	15076012	.	-	1	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 912 1305 +
ChrX	stalkie_big_nohaplotig	CDS	15076098	15076241	.	-	1	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 768 911 +
ChrX	stalkie_big_nohaplotig	CDS	15076815	15077211	.	-	2	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 371 767 +
ChrX	stalkie_big_nohaplotig	CDS	15077273	15077419	.	-	2	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 224 370 +
ChrX	stalkie_big_nohaplotig	CDS	15077470	15077692	.	-	0	Parent=FBgn0261938.1.mrna1;Target=FBgn0261938.1 1 223 +
ChrX	gffcl	locus	15083289	15085502	.	-	.	ID=RLOC_00000876;geneIDs=comp142847_c1_seq1.path1;transcripts=comp142847_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15083289	15085502	.	-	.	ID=comp142847_c1_seq1.mrna1;geneID=comp142847_c1_seq1.path1;Name=comp142847_c1_seq1;Dir=sensecoverage=100.0;identity=95.4;matches=1382;mismatches=20;indels=47;unknowns=0;Target=comp142847_c1_seq1 97 276 +;locus=RLOC_00000876
ChrX	stalkie_big_nohaplotig	exon	15083289	15083973	96	-	.	Parent=comp142847_c1_seq1.mrna1;Target=comp142847_c1_seq1 762 1434 +
ChrX	stalkie_big_nohaplotig	exon	15084771	15085502	93	-	.	Parent=comp142847_c1_seq1.mrna1;Target=comp142847_c1_seq1 1 761 +
ChrX	stalkie_big_nohaplotig	CDS	15085224	15085403	.	-	0	Parent=comp142847_c1_seq1.mrna1
ChrX	gffcl	locus	15092830	15093253	.	+	.	ID=RLOC_00000877;geneIDs=comp113897_c0_seq1.path1;transcripts=comp113897_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15092830	15093253	.	+	.	ID=comp113897_c0_seq1.mrna1;geneID=comp113897_c0_seq1.path1;Name=comp113897_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=424;mismatches=0;indels=0;unknowns=0;Target=comp113897_c0_seq1 424 1 .;CDS_Target=comp113897_c0_seq1 206 3 .;locus=RLOC_00000877
ChrX	stalkie_big_nohaplotig	exon	15092830	15093253	100	+	.	Parent=comp113897_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15092832	15093035	.	+	0	Parent=comp113897_c0_seq1.mrna1
ChrX	gffcl	locus	15106940	15109285	.	-	.	ID=RLOC_00000878;geneIDs=FBgn0031312.1.path1,comp154259_c0_seq1.path1;transcripts=FBgn0031312.1.mrna1,comp154259_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15106940	15109285	.	-	.	ID=FBgn0031312.1.mrna1;geneID=FBgn0031312.1.path1;Name=FBgn0031312.1;Dir=sensecoverage=100.0;identity=100.0;matches=1110;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000878
ChrX	stalkie_big_nohaplotig	exon	15106940	15107275	100	-	.	Parent=FBgn0031312.1.mrna1;Target=FBgn0031312.1 775 1110 +
ChrX	stalkie_big_nohaplotig	exon	15108457	15109114	100	-	.	Parent=FBgn0031312.1.mrna1;Target=FBgn0031312.1 117 774 +
ChrX	stalkie_big_nohaplotig	exon	15109170	15109285	100	-	.	Parent=FBgn0031312.1.mrna1;Target=FBgn0031312.1 1 116 +
ChrX	stalkie_big_nohaplotig	CDS	15106940	15107275	.	-	0	Parent=FBgn0031312.1.mrna1;Target=FBgn0031312.1 775 1110 +
ChrX	stalkie_big_nohaplotig	CDS	15108457	15109114	.	-	1	Parent=FBgn0031312.1.mrna1;Target=FBgn0031312.1 117 774 +
ChrX	stalkie_big_nohaplotig	CDS	15109170	15109285	.	-	0	Parent=FBgn0031312.1.mrna1;Target=FBgn0031312.1 1 116 +
ChrX	stalkie_big_nohaplotig	mRNA	15107255	15108480	.	-	.	ID=comp154259_c0_seq1.mrna1;geneID=comp154259_c0_seq1.path1;Name=comp154259_c0_seq1;Dir=antisensecoverage=100.0;identity=96.5;matches=1062;mismatches=15;indels=23;unknowns=0;Target=comp154259_c0_seq1 159 305 .;locus=RLOC_00000878
ChrX	stalkie_big_nohaplotig	exon	15107255	15108307	96	-	.	Parent=comp154259_c0_seq1.mrna1;Target=comp154259_c0_seq1 1 1076 -
ChrX	stalkie_big_nohaplotig	exon	15108457	15108480	100	-	.	Parent=comp154259_c0_seq1.mrna1;Target=comp154259_c0_seq1 1077 1100 -
ChrX	stalkie_big_nohaplotig	CDS	15107413	15107559	.	-	0	Parent=comp154259_c0_seq1.mrna1
ChrX	gffcl	locus	15112100	15112830	.	-	.	ID=RLOC_00000879;geneIDs=comp155983_c0_seq1.path5;transcripts=comp155983_c0_seq1.mrna5
ChrX	stalkie_big_nohaplotig	mRNA	15112100	15112830	.	-	.	ID=comp155983_c0_seq1.mrna5;geneID=comp155983_c0_seq1.path5;Name=comp155983_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=723;mismatches=8;indels=0;unknowns=0;Target=comp155983_c0_seq1 731 1 .;CDS_Target=comp155983_c0_seq1 105 1 .;locus=RLOC_00000879
ChrX	stalkie_big_nohaplotig	exon	15112100	15112830	98	-	.	Parent=comp155983_c0_seq1.mrna5
ChrX	stalkie_big_nohaplotig	CDS	15112726	15112830	.	-	0	Parent=comp155983_c0_seq1.mrna5
ChrX	gffcl	locus	15146350	15153729	.	+	.	ID=RLOC_00000880;geneIDs=comp554973_c0_seq1.path1;transcripts=comp554973_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15146350	15153729	.	+	.	ID=comp554973_c0_seq1.mrna1;geneID=comp554973_c0_seq1.path1;Name=comp554973_c0_seq1;Dir=antisensecoverage=92.1;identity=100.0;matches=268;mismatches=0;indels=0;unknowns=0;Target=comp554973_c0_seq1 79 126 .;locus=RLOC_00000880
ChrX	stalkie_big_nohaplotig	exon	15146350	15146596	100	+	.	Parent=comp554973_c0_seq1.mrna1;Target=comp554973_c0_seq1 22 268 -
ChrX	stalkie_big_nohaplotig	exon	15153709	15153729	100	+	.	Parent=comp554973_c0_seq1.mrna1;Target=comp554973_c0_seq1 1 21 -
ChrX	stalkie_big_nohaplotig	CDS	15146492	15146539	.	+	0	Parent=comp554973_c0_seq1.mrna1
ChrX	gffcl	locus	15149095	15150786	.	-	.	ID=RLOC_00000881;geneIDs=comp150298_c0_seq1.path1;transcripts=comp150298_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15149095	15150786	.	-	.	ID=comp150298_c0_seq1.mrna1;geneID=comp150298_c0_seq1.path1;Name=comp150298_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.9;matches=1674;mismatches=16;indels=3;unknowns=0;Target=comp150298_c0_seq1 1691 1 .;CDS_Target=comp150298_c0_seq1 97 2 .;locus=RLOC_00000881
ChrX	stalkie_big_nohaplotig	exon	15149095	15150786	98	-	.	Parent=comp150298_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15150690	15150785	.	-	0	Parent=comp150298_c0_seq1.mrna1
ChrX	gffcl	locus	15153826	15156229	.	+	.	ID=RLOC_00000882;geneIDs=FBgn0261458.1.path1;transcripts=FBgn0261458.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15153826	15156229	.	+	.	ID=FBgn0261458.1.mrna1;geneID=FBgn0261458.1.path1;Name=FBgn0261458.1;Dir=sensecoverage=100.0;identity=99.8;matches=1599;mismatches=2;indels=1;unknowns=0;Target=FBgn0261458.1 3 50 +;locus=RLOC_00000882
ChrX	stalkie_big_nohaplotig	exon	15153826	15154270	99	+	.	Parent=FBgn0261458.1.mrna1;Target=FBgn0261458.1 1 446 +
ChrX	stalkie_big_nohaplotig	exon	15154340	15154535	100	+	.	Parent=FBgn0261458.1.mrna1;Target=FBgn0261458.1 447 642 +
ChrX	stalkie_big_nohaplotig	exon	15154596	15154953	100	+	.	Parent=FBgn0261458.1.mrna1;Target=FBgn0261458.1 643 1000 +
ChrX	stalkie_big_nohaplotig	exon	15155075	15155244	100	+	.	Parent=FBgn0261458.1.mrna1;Target=FBgn0261458.1 1001 1170 +
ChrX	stalkie_big_nohaplotig	exon	15155311	15155517	99	+	.	Parent=FBgn0261458.1.mrna1;Target=FBgn0261458.1 1171 1377 +
ChrX	stalkie_big_nohaplotig	exon	15155944	15156087	99	+	.	Parent=FBgn0261458.1.mrna1;Target=FBgn0261458.1 1378 1521 +
ChrX	stalkie_big_nohaplotig	exon	15156149	15156229	100	+	.	Parent=FBgn0261458.1.mrna1;Target=FBgn0261458.1 1522 1602 +
ChrX	stalkie_big_nohaplotig	CDS	15153828	15153874	.	+	0	Parent=FBgn0261458.1.mrna1
ChrX	gffcl	locus	15159043	15160032	.	-	.	ID=RLOC_00000883;geneIDs=FBgn0038490.1.path1;transcripts=FBgn0038490.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15159043	15160032	.	-	.	ID=FBgn0038490.1.mrna1;geneID=FBgn0038490.1.path1;Name=FBgn0038490.1;Dir=sensecoverage=100.0;identity=100.0;matches=870;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000883
ChrX	stalkie_big_nohaplotig	exon	15159043	15159297	100	-	.	Parent=FBgn0038490.1.mrna1;Target=FBgn0038490.1 616 870 +
ChrX	stalkie_big_nohaplotig	exon	15159357	15159620	100	-	.	Parent=FBgn0038490.1.mrna1;Target=FBgn0038490.1 352 615 +
ChrX	stalkie_big_nohaplotig	exon	15159682	15160032	100	-	.	Parent=FBgn0038490.1.mrna1;Target=FBgn0038490.1 1 351 +
ChrX	stalkie_big_nohaplotig	CDS	15159043	15159297	.	-	0	Parent=FBgn0038490.1.mrna1;Target=FBgn0038490.1 616 870 +
ChrX	stalkie_big_nohaplotig	CDS	15159357	15159620	.	-	0	Parent=FBgn0038490.1.mrna1;Target=FBgn0038490.1 352 615 +
ChrX	stalkie_big_nohaplotig	CDS	15159682	15160032	.	-	0	Parent=FBgn0038490.1.mrna1;Target=FBgn0038490.1 1 351 +
ChrX	gffcl	locus	15162955	15163503	.	-	.	ID=RLOC_00000884;geneIDs=FBgn0031310.1.path1;transcripts=FBgn0031310.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15162955	15163503	.	-	.	ID=FBgn0031310.1.mrna1;geneID=FBgn0031310.1.path1;Name=FBgn0031310.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=549;mismatches=0;indels=0;unknowns=0;Target=FBgn0031310.1 549 1 .;locus=RLOC_00000884
ChrX	stalkie_big_nohaplotig	exon	15162955	15163503	100	-	.	Parent=FBgn0031310.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15162955	15163503	.	-	0	Parent=FBgn0031310.1.mrna1
ChrX	gffcl	locus	15165154	15165667	.	+	.	ID=RLOC_00000885;geneIDs=comp152121_c1_seq1.path1;transcripts=comp152121_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15165154	15165667	.	+	.	ID=comp152121_c1_seq1.mrna1;geneID=comp152121_c1_seq1.path1;Name=comp152121_c1_seq1;Dir=indeterminatecoverage=100.0;identity=93.6;matches=481;mismatches=18;indels=15;unknowns=0;Target=comp152121_c1_seq1 499 1 .;CDS_Target=comp152121_c1_seq1 121 86 .;locus=RLOC_00000885
ChrX	stalkie_big_nohaplotig	exon	15165154	15165667	93	+	.	Parent=comp152121_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15165239	15165274	.	+	0	Parent=comp152121_c1_seq1.mrna1
ChrX	gffcl	locus	15215247	15244761	.	+	.	ID=RLOC_00000886;geneIDs=FBgn0051760.path1,comp148877_c0_seq1.path1;transcripts=FBgn0051760.mrna1,FBgn0051760.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15215255	15244761	.	+	.	ID=FBgn0051760.mrna1;geneID=FBgn0051760.path1;Name=FBgn0051760;Dir=sensecoverage=99.2;identity=99.5;matches=1712;mismatches=8;indels=0;unknowns=0;locus=RLOC_00000886
ChrX	stalkie_big_nohaplotig	exon	15215255	15215351	100	+	.	Parent=FBgn0051760.mrna1;Target=FBgn0051760 15 111 +
ChrX	stalkie_big_nohaplotig	exon	15219080	15219266	98	+	.	Parent=FBgn0051760.mrna1;Target=FBgn0051760 112 298 +
ChrX	stalkie_big_nohaplotig	exon	15228010	15228211	98	+	.	Parent=FBgn0051760.mrna1;Target=FBgn0051760 299 500 +
ChrX	stalkie_big_nohaplotig	exon	15229226	15229586	100	+	.	Parent=FBgn0051760.mrna1;Target=FBgn0051760 501 861 +
ChrX	stalkie_big_nohaplotig	exon	15229825	15230117	100	+	.	Parent=FBgn0051760.mrna1;Target=FBgn0051760 862 1154 +
ChrX	stalkie_big_nohaplotig	exon	15231069	15231222	99	+	.	Parent=FBgn0051760.mrna1;Target=FBgn0051760 1155 1308 +
ChrX	stalkie_big_nohaplotig	exon	15235515	15235624	99	+	.	Parent=FBgn0051760.mrna1;Target=FBgn0051760 1309 1418 +
ChrX	stalkie_big_nohaplotig	exon	15236702	15236846	100	+	.	Parent=FBgn0051760.mrna1;Target=FBgn0051760 1419 1563 +
ChrX	stalkie_big_nohaplotig	exon	15237376	15237584	99	+	.	Parent=FBgn0051760.mrna1;Target=FBgn0051760 1 53 +
ChrX	stalkie_big_nohaplotig	exon	15242024	15242273	100	+	.	Parent=FBgn0051760.mrna1;Target=FBgn0051760 54 303 +
ChrX	stalkie_big_nohaplotig	exon	15242334	15242551	99	+	.	Parent=FBgn0051760.mrna1;Target=FBgn0051760 304 521 +
ChrX	stalkie_big_nohaplotig	exon	15244710	15244761	100	+	.	Parent=FBgn0051760.mrna1;Target=FBgn0051760 522 573 +
ChrX	stalkie_big_nohaplotig	CDS	15215256	15215351	100	+	0	Parent=FBgn0051760.mrna1;Target=FBgn0051760 16 111 +
ChrX	stalkie_big_nohaplotig	CDS	15219080	15219266	98	+	0	Parent=FBgn0051760.mrna1;Target=FBgn0051760 112 298 +
ChrX	stalkie_big_nohaplotig	CDS	15228010	15228211	98	+	1	Parent=FBgn0051760.mrna1;Target=FBgn0051760 299 500 +
ChrX	stalkie_big_nohaplotig	CDS	15229226	15229586	100	+	2	Parent=FBgn0051760.mrna1;Target=FBgn0051760 501 861 +
ChrX	stalkie_big_nohaplotig	CDS	15229825	15230117	100	+	0	Parent=FBgn0051760.mrna1;Target=FBgn0051760 862 1154 +
ChrX	stalkie_big_nohaplotig	CDS	15231069	15231222	99	+	2	Parent=FBgn0051760.mrna1;Target=FBgn0051760 1155 1308 +
ChrX	stalkie_big_nohaplotig	CDS	15235515	15235624	99	+	0	Parent=FBgn0051760.mrna1;Target=FBgn0051760 1309 1418 +
ChrX	stalkie_big_nohaplotig	CDS	15236702	15236846	100	+	2	Parent=FBgn0051760.mrna1;Target=FBgn0051760 1419 1563 +
ChrX	stalkie_big_nohaplotig	CDS	15237376	15237546	99	+	0	Parent=FBgn0051760.mrna1;Target=FBgn0051760 1564 1734 +
ChrX	stalkie_big_nohaplotig	CDS	15237532	15237584	100	+	0	Parent=FBgn0051760.mrna1;Target=FBgn0051760 1 53 +
ChrX	stalkie_big_nohaplotig	CDS	15242024	15242273	100	+	2	Parent=FBgn0051760.mrna1;Target=FBgn0051760 54 303 +
ChrX	stalkie_big_nohaplotig	CDS	15242334	15242551	99	+	0	Parent=FBgn0051760.mrna1;Target=FBgn0051760 304 521 +
ChrX	stalkie_big_nohaplotig	CDS	15244710	15244761	100	+	2	Parent=FBgn0051760.mrna1;Target=FBgn0051760 522 573 +
ChrX	stalkie_big_nohaplotig	mRNA	15237532	15244761	.	+	.	ID=FBgn0051760.mrna1;geneID=FBgn0051760.path1;Name=FBgn0051760;Dir=sensecoverage=100.0;identity=99.8;matches=572;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000886
ChrX	stalkie_big_nohaplotig	exon	15237532	15244761	.	+	.	Parent=FBgn0051760.mrna1
ChrX	gffcl	locus	15245953	15247262	.	-	.	ID=RLOC_00000887;geneIDs=comp160576_c0_seq1.path1;transcripts=comp160576_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15245953	15247262	.	-	.	ID=comp160576_c0_seq1.mrna1;geneID=comp160576_c0_seq1.path1;Name=comp160576_c0_seq1;Dir=indeterminatecoverage=97.4;identity=99.1;matches=1298;mismatches=12;indels=0;unknowns=0;Target=comp160576_c0_seq1 1310 1 .;CDS_Target=comp160576_c0_seq1 272 144 .;locus=RLOC_00000887
ChrX	stalkie_big_nohaplotig	exon	15245953	15247262	99	-	.	Parent=comp160576_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15246991	15247119	.	-	0	Parent=comp160576_c0_seq1.mrna1
ChrX	gffcl	locus	15247528	15247837	.	-	.	ID=RLOC_00000888;geneIDs=comp89483_c0_seq1.path1;transcripts=comp89483_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15247528	15247837	.	-	.	ID=comp89483_c0_seq1.mrna1;geneID=comp89483_c0_seq1.path1;Name=comp89483_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=310;mismatches=0;indels=0;unknowns=0;Target=comp89483_c0_seq1 310 1 .;CDS_Target=comp89483_c0_seq1 133 50 .;locus=RLOC_00000888
ChrX	stalkie_big_nohaplotig	exon	15247528	15247837	100	-	.	Parent=comp89483_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15247705	15247788	.	-	0	Parent=comp89483_c0_seq1.mrna1
ChrX	gffcl	locus	15247937	15248871	.	-	.	ID=RLOC_00000889;geneIDs=comp146652_c0_seq1.path1;transcripts=comp146652_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15247937	15248871	.	-	.	ID=comp146652_c0_seq1.mrna1;geneID=comp146652_c0_seq1.path1;Name=comp146652_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=933;mismatches=2;indels=0;unknowns=0;Target=comp146652_c0_seq1 935 1 .;CDS_Target=comp146652_c0_seq1 935 831 .;locus=RLOC_00000889
ChrX	stalkie_big_nohaplotig	exon	15247937	15248871	99	-	.	Parent=comp146652_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15247937	15248041	.	-	0	Parent=comp146652_c0_seq1.mrna1
ChrX	gffcl	locus	15248993	15249612	.	+	.	ID=RLOC_00000890;geneIDs=comp152023_c0_seq1.path1;transcripts=comp152023_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15248993	15249612	.	+	.	ID=comp152023_c0_seq1.mrna1;geneID=comp152023_c0_seq1.path1;Name=comp152023_c0_seq1;Dir=indeterminatecoverage=97.9;identity=98.2;matches=610;mismatches=10;indels=1;unknowns=0;Target=comp152023_c0_seq1 634 14 .;CDS_Target=comp152023_c0_seq1 573 469 .;locus=RLOC_00000890
ChrX	stalkie_big_nohaplotig	exon	15248993	15249612	98	+	.	Parent=comp152023_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15249447	15249551	.	+	0	Parent=comp152023_c0_seq1.mrna1
ChrX	gffcl	locus	15249975	15250761	.	-	.	ID=RLOC_00000891;geneIDs=comp156991_c0_seq1.path1;transcripts=comp156991_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15249975	15250761	.	-	.	ID=comp156991_c0_seq1.mrna1;geneID=comp156991_c0_seq1.path1;Name=comp156991_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=773;mismatches=14;indels=0;unknowns=0;Target=comp156991_c0_seq1 787 1 .;CDS_Target=comp156991_c0_seq1 558 463 .;locus=RLOC_00000891
ChrX	stalkie_big_nohaplotig	exon	15249975	15250761	98	-	.	Parent=comp156991_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15250204	15250299	.	-	0	Parent=comp156991_c0_seq1.mrna1
ChrX	gffcl	locus	15250791	15324058	.	.	.	ID=RLOC_00000892;geneIDs=comp81751_c0_seq1.path1,comp147580_c0_seq1.path1;transcripts=comp81751_c0_seq1.mrna1,comp147580_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15250791	15324058	.	+	.	ID=comp81751_c0_seq1.mrna1;geneID=comp81751_c0_seq1.path1;Name=comp81751_c0_seq1;Dir=indeterminatecoverage=87.3;identity=99.8;matches=447;mismatches=0;indels=1;unknowns=0;Target=comp81751_c0_seq1 214 143 .;locus=RLOC_00000892
ChrX	stalkie_big_nohaplotig	exon	15250791	15251192	99	+	.	Parent=comp81751_c0_seq1.mrna1;Target=comp81751_c0_seq1 418 16 .
ChrX	stalkie_big_nohaplotig	exon	15258059	15258060	100	+	.	Parent=comp81751_c0_seq1.mrna1;Target=comp81751_c0_seq1 420 419 .
ChrX	stalkie_big_nohaplotig	exon	15259554	15259560	100	+	.	Parent=comp81751_c0_seq1.mrna1;Target=comp81751_c0_seq1 427 421 .
ChrX	stalkie_big_nohaplotig	exon	15275113	15275116	100	+	.	Parent=comp81751_c0_seq1.mrna1;Target=comp81751_c0_seq1 431 428 .
ChrX	stalkie_big_nohaplotig	exon	15278313	15278315	100	+	.	Parent=comp81751_c0_seq1.mrna1;Target=comp81751_c0_seq1 434 432 .
ChrX	stalkie_big_nohaplotig	exon	15282712	15282713	100	+	.	Parent=comp81751_c0_seq1.mrna1;Target=comp81751_c0_seq1 436 435 .
ChrX	stalkie_big_nohaplotig	exon	15306563	15306570	100	+	.	Parent=comp81751_c0_seq1.mrna1;Target=comp81751_c0_seq1 444 437 .
ChrX	stalkie_big_nohaplotig	exon	15312719	15312723	100	+	.	Parent=comp81751_c0_seq1.mrna1;Target=comp81751_c0_seq1 449 445 .
ChrX	stalkie_big_nohaplotig	exon	15320239	15320244	100	+	.	Parent=comp81751_c0_seq1.mrna1;Target=comp81751_c0_seq1 455 450 .
ChrX	stalkie_big_nohaplotig	exon	15324051	15324058	100	+	.	Parent=comp81751_c0_seq1.mrna1;Target=comp81751_c0_seq1 463 456 .
ChrX	stalkie_big_nohaplotig	CDS	15250918	15250989	.	+	0	Parent=comp81751_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15319396	15320253	.	-	.	ID=comp147580_c0_seq1.mrna1;geneID=comp147580_c0_seq1.path1;Name=comp147580_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=848;mismatches=10;indels=0;unknowns=0;Target=comp147580_c0_seq1 858 1 .;CDS_Target=comp147580_c0_seq1 856 665 .;locus=RLOC_00000892
ChrX	stalkie_big_nohaplotig	exon	15319396	15320253	98	-	.	Parent=comp147580_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15319398	15319589	.	-	0	Parent=comp147580_c0_seq1.mrna1
ChrX	gffcl	locus	15253342	15255188	.	+	.	ID=RLOC_00000893;geneIDs=Dv_FBgn0204376.1.path1;transcripts=Dv_FBgn0204376.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15253342	15255188	.	+	.	ID=Dv_FBgn0204376.1.mrna1;geneID=Dv_FBgn0204376.1.path1;Name=Dv_FBgn0204376.1;Dir=sensecoverage=100.0;identity=99.8;matches=503;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000893
ChrX	stalkie_big_nohaplotig	exon	15253342	15253447	100	+	.	Parent=Dv_FBgn0204376.1.mrna1;Target=Dv_FBgn0204376.1 1 106 +
ChrX	stalkie_big_nohaplotig	exon	15253507	15253664	100	+	.	Parent=Dv_FBgn0204376.1.mrna1;Target=Dv_FBgn0204376.1 107 264 +
ChrX	stalkie_big_nohaplotig	exon	15254865	15255053	100	+	.	Parent=Dv_FBgn0204376.1.mrna1;Target=Dv_FBgn0204376.1 265 453 +
ChrX	stalkie_big_nohaplotig	exon	15255138	15255188	98	+	.	Parent=Dv_FBgn0204376.1.mrna1;Target=Dv_FBgn0204376.1 454 504 +
ChrX	stalkie_big_nohaplotig	CDS	15253342	15253447	.	+	0	Parent=Dv_FBgn0204376.1.mrna1;Target=Dv_FBgn0204376.1 1 106 +
ChrX	stalkie_big_nohaplotig	CDS	15253507	15253664	.	+	2	Parent=Dv_FBgn0204376.1.mrna1;Target=Dv_FBgn0204376.1 107 264 +
ChrX	stalkie_big_nohaplotig	CDS	15254865	15255053	.	+	0	Parent=Dv_FBgn0204376.1.mrna1;Target=Dv_FBgn0204376.1 265 453 +
ChrX	stalkie_big_nohaplotig	CDS	15255138	15255188	.	+	0	Parent=Dv_FBgn0204376.1.mrna1;Target=Dv_FBgn0204376.1 454 504 +
ChrX	gffcl	locus	15256786	15263923	.	-	.	ID=RLOC_00000894;geneIDs=FBgn0032420.1.path1;transcripts=FBgn0032420.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15256786	15263923	.	-	.	ID=FBgn0032420.1.mrna1;geneID=FBgn0032420.1.path1;Name=FBgn0032420.1;Dir=sensecoverage=100.0;identity=100.0;matches=453;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000894
ChrX	stalkie_big_nohaplotig	exon	15256786	15257003	100	-	.	Parent=FBgn0032420.1.mrna1;Target=FBgn0032420.1 236 453 +
ChrX	stalkie_big_nohaplotig	exon	15257069	15257254	100	-	.	Parent=FBgn0032420.1.mrna1;Target=FBgn0032420.1 50 235 +
ChrX	stalkie_big_nohaplotig	exon	15263875	15263923	100	-	.	Parent=FBgn0032420.1.mrna1;Target=FBgn0032420.1 1 49 +
ChrX	stalkie_big_nohaplotig	CDS	15256786	15257003	.	-	2	Parent=FBgn0032420.1.mrna1;Target=FBgn0032420.1 236 453 +
ChrX	stalkie_big_nohaplotig	CDS	15257069	15257254	.	-	2	Parent=FBgn0032420.1.mrna1;Target=FBgn0032420.1 50 235 +
ChrX	stalkie_big_nohaplotig	CDS	15263875	15263923	.	-	0	Parent=FBgn0032420.1.mrna1;Target=FBgn0032420.1 1 49 +
ChrX	gffcl	locus	15260376	15260938	.	+	.	ID=RLOC_00000895;geneIDs=FBgn0032421.1.path1;transcripts=FBgn0032421.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15260376	15260938	.	+	.	ID=FBgn0032421.1.mrna1;geneID=FBgn0032421.1.path1;Name=FBgn0032421.1;Dir=sensecoverage=100.0;identity=99.6;matches=484;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000895
ChrX	stalkie_big_nohaplotig	exon	15260376	15260469	100	+	.	Parent=FBgn0032421.1.mrna1;Target=FBgn0032421.1 1 94 +
ChrX	stalkie_big_nohaplotig	exon	15260547	15260938	99	+	.	Parent=FBgn0032421.1.mrna1;Target=FBgn0032421.1 95 486 +
ChrX	stalkie_big_nohaplotig	CDS	15260376	15260469	.	+	0	Parent=FBgn0032421.1.mrna1;Target=FBgn0032421.1 1 94 +
ChrX	stalkie_big_nohaplotig	CDS	15260547	15260938	.	+	2	Parent=FBgn0032421.1.mrna1;Target=FBgn0032421.1 95 486 +
ChrX	gffcl	locus	15265310	15273020	.	.	.	ID=RLOC_00000896;geneIDs=FBgn0032422.1.path1,comp152081_c0_seq1.path1,comp153170_c0_seq1.path1,comp162319_c0_seq1.path1;transcripts=FBgn0032422.1.mrna1,comp153170_c0_seq1.mrna1,comp162319_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15265310	15273020	.	-	.	ID=FBgn0032422.1.mrna1;geneID=FBgn0032422.1.path1;Name=FBgn0032422.1;Dir=sensecoverage=100.0;identity=100.0;matches=459;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000896
ChrX	stalkie_big_nohaplotig	exon	15265310	15265512	100	-	.	Parent=FBgn0032422.1.mrna1;Target=FBgn0032422.1 257 459 +
ChrX	stalkie_big_nohaplotig	exon	15269793	15269963	100	-	.	Parent=FBgn0032422.1.mrna1;Target=FBgn0032422.1 86 256 +
ChrX	stalkie_big_nohaplotig	exon	15272936	15273020	100	-	.	Parent=FBgn0032422.1.mrna1;Target=FBgn0032422.1 1 85 +
ChrX	stalkie_big_nohaplotig	CDS	15265310	15265512	.	-	2	Parent=FBgn0032422.1.mrna1;Target=FBgn0032422.1 257 459 +
ChrX	stalkie_big_nohaplotig	CDS	15269793	15269963	.	-	2	Parent=FBgn0032422.1.mrna1;Target=FBgn0032422.1 86 256 +
ChrX	stalkie_big_nohaplotig	CDS	15272936	15273020	.	-	0	Parent=FBgn0032422.1.mrna1;Target=FBgn0032422.1 1 85 +
ChrX	stalkie_big_nohaplotig	mRNA	15265490	15267233	.	+	.	ID=comp153170_c0_seq1.mrna1;geneID=comp153170_c0_seq1.path1;Name=comp153170_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=1722;mismatches=22;indels=2;unknowns=0;Target=comp153170_c0_seq1 1746 1 .;CDS_Target=comp153170_c0_seq1 1240 1088 .;locus=RLOC_00000896
ChrX	stalkie_big_nohaplotig	exon	15265490	15267233	98	+	.	Parent=comp153170_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15266575	15266727	.	+	0	Parent=comp153170_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15270560	15272956	.	-	.	ID=comp162319_c0_seq1.mrna1;geneID=comp162319_c0_seq1.path1;Name=comp162319_c0_seq1;Dir=indeterminatecoverage=99.2;identity=98.7;matches=2368;mismatches=14;indels=16;unknowns=0;Target=comp162319_c0_seq1 2383 1 .;CDS_Target=comp162319_c0_seq1 1104 898 .;locus=RLOC_00000896
ChrX	stalkie_big_nohaplotig	exon	15270560	15272956	98	-	.	Parent=comp162319_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15271851	15272057	.	-	0	Parent=comp162319_c0_seq1.mrna1
ChrX	gffcl	locus	15267766	15269816	.	+	.	ID=RLOC_00000897;geneIDs=comp151672_c0_seq1.path1;transcripts=comp151672_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15267766	15269816	.	+	.	ID=comp151672_c0_seq1.mrna1;geneID=comp151672_c0_seq1.path1;Name=comp151672_c0_seq1;Dir=antisensecoverage=100.0;identity=89.2;matches=1053;mismatches=43;indels=84;unknowns=0;Target=comp151672_c0_seq1 498 713 .;locus=RLOC_00000897
ChrX	stalkie_big_nohaplotig	exon	15267766	15268431	83	+	.	Parent=comp151672_c0_seq1.mrna1;Target=comp151672_c0_seq1 438 1173 -
ChrX	stalkie_big_nohaplotig	exon	15269380	15269816	98	+	.	Parent=comp151672_c0_seq1.mrna1;Target=comp151672_c0_seq1 1 437 -
ChrX	stalkie_big_nohaplotig	CDS	15268156	15268371	.	+	0	Parent=comp151672_c0_seq1.mrna1
ChrX	gffcl	locus	15273427	15274090	.	+	.	ID=RLOC_00000898;geneIDs=comp140303_c0_seq1.path1;transcripts=comp140303_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15273427	15274090	.	+	.	ID=comp140303_c0_seq1.mrna1;geneID=comp140303_c0_seq1.path1;Name=comp140303_c0_seq1;Dir=indeterminatecoverage=96.2;identity=95.2;matches=652;mismatches=12;indels=21;unknowns=0;Target=comp140303_c0_seq1 685 1 .;CDS_Target=comp140303_c0_seq1 306 229 .;locus=RLOC_00000898
ChrX	stalkie_big_nohaplotig	exon	15273427	15274090	95	+	.	Parent=comp140303_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15273648	15273712	.	+	0	Parent=comp140303_c0_seq1.mrna1
ChrX	gffcl	locus	15316250	15316847	.	+	.	ID=RLOC_00000899;geneIDs=comp117961_c0_seq1.path1;transcripts=comp117961_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15316250	15316847	.	+	.	ID=comp117961_c0_seq1.mrna1;geneID=comp117961_c0_seq1.path1;Name=comp117961_c0_seq1;Dir=indeterminatecoverage=96.1;identity=99.5;matches=595;mismatches=3;indels=0;unknowns=0;Target=comp117961_c0_seq1 598 1 .;CDS_Target=comp117961_c0_seq1 65 3 .;locus=RLOC_00000899
ChrX	stalkie_big_nohaplotig	exon	15316250	15316847	99	+	.	Parent=comp117961_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15316252	15316314	.	+	0	Parent=comp117961_c0_seq1.mrna1
ChrX	gffcl	locus	15316890	15317840	.	-	.	ID=RLOC_00000900;geneIDs=comp138706_c0_seq1.path1;transcripts=comp138706_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15316890	15317840	.	-	.	ID=comp138706_c0_seq1.mrna1;geneID=comp138706_c0_seq1.path1;Name=comp138706_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=948;mismatches=3;indels=0;unknowns=0;Target=comp138706_c0_seq1 951 1 .;CDS_Target=comp138706_c0_seq1 210 76 .;locus=RLOC_00000900
ChrX	stalkie_big_nohaplotig	exon	15316890	15317840	99	-	.	Parent=comp138706_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15317631	15317765	.	-	0	Parent=comp138706_c0_seq1.mrna1
ChrX	gffcl	locus	15516354	15516987	.	+	.	ID=RLOC_00000901;geneIDs=comp115406_c0_seq1.path1;transcripts=comp115406_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15516354	15516987	.	+	.	ID=comp115406_c0_seq1.mrna1;geneID=comp115406_c0_seq1.path1;Name=comp115406_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=627;mismatches=7;indels=0;unknowns=0;Target=comp115406_c0_seq1 634 1 .;CDS_Target=comp115406_c0_seq1 415 296 .;locus=RLOC_00000901
ChrX	stalkie_big_nohaplotig	exon	15516354	15516987	98	+	.	Parent=comp115406_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15516649	15516768	.	+	0	Parent=comp115406_c0_seq1.mrna1
ChrX	gffcl	locus	15519558	15519877	.	+	.	ID=RLOC_00000902;geneIDs=comp106518_c0_seq1.path1;transcripts=comp106518_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15519558	15519877	.	+	.	ID=comp106518_c0_seq1.mrna1;geneID=comp106518_c0_seq1.path1;Name=comp106518_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=318;mismatches=2;indels=0;unknowns=0;Target=comp106518_c0_seq1 320 1 .;CDS_Target=comp106518_c0_seq1 201 1 .;locus=RLOC_00000902
ChrX	stalkie_big_nohaplotig	exon	15519558	15519877	99	+	.	Parent=comp106518_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15519558	15519758	.	+	0	Parent=comp106518_c0_seq1.mrna1
ChrX	gffcl	locus	15520074	15604688	.	+	.	ID=RLOC_00000903;geneIDs=FBgn0000114.1.path1,comp113471_c0_seq1.path1,comp151567_c1_seq1.path1;transcripts=comp151567_c1_seq1.mrna1,FBgn0000114.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15520074	15604408	.	+	.	ID=comp151567_c1_seq1.mrna1;geneID=comp151567_c1_seq1.path1;Name=comp151567_c1_seq1;Dir=sensecoverage=99.9;identity=99.3;matches=3041;mismatches=6;indels=16;unknowns=0;locus=RLOC_00000903
ChrX	stalkie_big_nohaplotig	exon	15520074	15520380	99	+	.	Parent=comp151567_c1_seq1.mrna1;Target=comp151567_c1_seq1 2 308 +
ChrX	stalkie_big_nohaplotig	exon	15522555	15522880	100	+	.	Parent=comp151567_c1_seq1.mrna1;Target=comp151567_c1_seq1 309 634 +
ChrX	stalkie_big_nohaplotig	exon	15539924	15540006	100	+	.	Parent=comp151567_c1_seq1.mrna1;Target=comp151567_c1_seq1 635 717 +
ChrX	stalkie_big_nohaplotig	exon	15548906	15548954	100	+	.	Parent=comp151567_c1_seq1.mrna1;Target=comp151567_c1_seq1 718 766 +
ChrX	stalkie_big_nohaplotig	exon	15587483	15587664	100	+	.	Parent=comp151567_c1_seq1.mrna1;Target=comp151567_c1_seq1 767 948 +
ChrX	stalkie_big_nohaplotig	exon	15587789	15588086	100	+	.	Parent=comp151567_c1_seq1.mrna1;Target=comp151567_c1_seq1 949 1246 +
ChrX	stalkie_big_nohaplotig	exon	15589053	15589235	100	+	.	Parent=comp151567_c1_seq1.mrna1;Target=comp151567_c1_seq1 1247 1429 +
ChrX	stalkie_big_nohaplotig	exon	15590002	15590028	100	+	.	Parent=comp151567_c1_seq1.mrna1;Target=comp151567_c1_seq1 1430 1456 +
ChrX	stalkie_big_nohaplotig	exon	15591885	15592028	100	+	.	Parent=comp151567_c1_seq1.mrna1;Target=comp151567_c1_seq1 1457 1600 +
ChrX	stalkie_big_nohaplotig	exon	15597612	15598357	97	+	.	Parent=comp151567_c1_seq1.mrna1;Target=comp151567_c1_seq1 1601 2362 +
ChrX	stalkie_big_nohaplotig	exon	15603433	15603493	98	+	.	Parent=comp151567_c1_seq1.mrna1;Target=comp151567_c1_seq1 2363 2423 +
ChrX	stalkie_big_nohaplotig	exon	15603768	15604408	99	+	.	Parent=comp151567_c1_seq1.mrna1;Target=comp151567_c1_seq1 2424 3064 +
ChrX	stalkie_big_nohaplotig	CDS	15520298	15520380	.	+	0	Parent=comp151567_c1_seq1.mrna1;Target=comp151567_c1_seq1 226 308 +
ChrX	stalkie_big_nohaplotig	CDS	15522555	15522880	.	+	1	Parent=comp151567_c1_seq1.mrna1;Target=comp151567_c1_seq1 309 634 +
ChrX	stalkie_big_nohaplotig	CDS	15539924	15540006	.	+	2	Parent=comp151567_c1_seq1.mrna1;Target=comp151567_c1_seq1 635 717 +
ChrX	stalkie_big_nohaplotig	CDS	15548906	15548954	.	+	0	Parent=comp151567_c1_seq1.mrna1;Target=comp151567_c1_seq1 718 766 +
ChrX	stalkie_big_nohaplotig	CDS	15587483	15587664	.	+	2	Parent=comp151567_c1_seq1.mrna1;Target=comp151567_c1_seq1 767 948 +
ChrX	stalkie_big_nohaplotig	CDS	15587789	15588086	.	+	0	Parent=comp151567_c1_seq1.mrna1;Target=comp151567_c1_seq1 949 1246 +
ChrX	stalkie_big_nohaplotig	CDS	15589053	15589235	.	+	2	Parent=comp151567_c1_seq1.mrna1;Target=comp151567_c1_seq1 1247 1429 +
ChrX	stalkie_big_nohaplotig	CDS	15590002	15590028	.	+	2	Parent=comp151567_c1_seq1.mrna1;Target=comp151567_c1_seq1 1430 1456 +
ChrX	stalkie_big_nohaplotig	CDS	15591885	15592028	.	+	2	Parent=comp151567_c1_seq1.mrna1;Target=comp151567_c1_seq1 1457 1600 +
ChrX	stalkie_big_nohaplotig	CDS	15597612	15597883	.	+	2	Parent=comp151567_c1_seq1.mrna1;Target=comp151567_c1_seq1 1601 1872 +
ChrX	stalkie_big_nohaplotig	mRNA	15520274	15597880	.	+	.	ID=FBgn0000114.1.mrna1;geneID=FBgn0000114.1.path1;Name=FBgn0000114.1;Dir=sensecoverage=100.0;identity=100.0;matches=1641;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000903
ChrX	stalkie_big_nohaplotig	exon	15520274	15520380	100	+	.	Parent=FBgn0000114.1.mrna1;Target=FBgn0000114.1 1 107 +
ChrX	stalkie_big_nohaplotig	exon	15522555	15522880	100	+	.	Parent=FBgn0000114.1.mrna1;Target=FBgn0000114.1 108 433 +
ChrX	stalkie_big_nohaplotig	exon	15539924	15540006	100	+	.	Parent=FBgn0000114.1.mrna1;Target=FBgn0000114.1 434 516 +
ChrX	stalkie_big_nohaplotig	exon	15548906	15548954	100	+	.	Parent=FBgn0000114.1.mrna1;Target=FBgn0000114.1 517 565 +
ChrX	stalkie_big_nohaplotig	exon	15587483	15587664	100	+	.	Parent=FBgn0000114.1.mrna1;Target=FBgn0000114.1 566 747 +
ChrX	stalkie_big_nohaplotig	exon	15587789	15588086	100	+	.	Parent=FBgn0000114.1.mrna1;Target=FBgn0000114.1 748 1045 +
ChrX	stalkie_big_nohaplotig	exon	15589053	15589235	100	+	.	Parent=FBgn0000114.1.mrna1;Target=FBgn0000114.1 1046 1228 +
ChrX	stalkie_big_nohaplotig	exon	15591885	15592028	100	+	.	Parent=FBgn0000114.1.mrna1;Target=FBgn0000114.1 1229 1372 +
ChrX	stalkie_big_nohaplotig	exon	15597612	15597880	100	+	.	Parent=FBgn0000114.1.mrna1;Target=FBgn0000114.1 1373 1641 +
ChrX	stalkie_big_nohaplotig	CDS	15520274	15520380	.	+	0	Parent=FBgn0000114.1.mrna1;Target=FBgn0000114.1 1 107 +
ChrX	stalkie_big_nohaplotig	CDS	15522555	15522880	.	+	1	Parent=FBgn0000114.1.mrna1;Target=FBgn0000114.1 108 433 +
ChrX	stalkie_big_nohaplotig	CDS	15539924	15540006	.	+	2	Parent=FBgn0000114.1.mrna1;Target=FBgn0000114.1 434 516 +
ChrX	stalkie_big_nohaplotig	CDS	15548906	15548954	.	+	0	Parent=FBgn0000114.1.mrna1;Target=FBgn0000114.1 517 565 +
ChrX	stalkie_big_nohaplotig	CDS	15587483	15587664	.	+	2	Parent=FBgn0000114.1.mrna1;Target=FBgn0000114.1 566 747 +
ChrX	stalkie_big_nohaplotig	CDS	15587789	15588086	.	+	0	Parent=FBgn0000114.1.mrna1;Target=FBgn0000114.1 748 1045 +
ChrX	stalkie_big_nohaplotig	CDS	15589053	15589235	.	+	2	Parent=FBgn0000114.1.mrna1;Target=FBgn0000114.1 1046 1228 +
ChrX	stalkie_big_nohaplotig	CDS	15591885	15592028	.	+	2	Parent=FBgn0000114.1.mrna1;Target=FBgn0000114.1 1229 1372 +
ChrX	stalkie_big_nohaplotig	CDS	15597612	15597880	.	+	2	Parent=FBgn0000114.1.mrna1;Target=FBgn0000114.1 1373 1641 +
ChrX	gffcl	locus	15598516	15599590	.	-	.	ID=RLOC_00000904;geneIDs=comp135390_c0_seq1.path1;transcripts=comp135390_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15598516	15599590	.	-	.	ID=comp135390_c0_seq1.mrna1;geneID=comp135390_c0_seq1.path1;Name=comp135390_c0_seq1;Dir=indeterminatecoverage=95.3;identity=97.6;matches=1053;mismatches=8;indels=18;unknowns=0;Target=comp135390_c0_seq1 1069 5 .;CDS_Target=comp135390_c0_seq1 583 485 .;locus=RLOC_00000904
ChrX	stalkie_big_nohaplotig	exon	15598516	15599590	97	-	.	Parent=comp135390_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15599003	15599102	.	-	0	Parent=comp135390_c0_seq1.mrna1
ChrX	gffcl	locus	15615327	15616353	.	-	.	ID=RLOC_00000905;geneIDs=FBgn0000455.1.path1;transcripts=FBgn0000455.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15615327	15616353	.	-	.	ID=FBgn0000455.1.mrna1;geneID=FBgn0000455.1.path1;Name=FBgn0000455.1;Dir=sensecoverage=100.0;identity=99.9;matches=905;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000905
ChrX	stalkie_big_nohaplotig	exon	15615327	15616014	99	-	.	Parent=FBgn0000455.1.mrna1;Target=FBgn0000455.1 219 906 +
ChrX	stalkie_big_nohaplotig	exon	15616072	15616271	100	-	.	Parent=FBgn0000455.1.mrna1;Target=FBgn0000455.1 19 218 +
ChrX	stalkie_big_nohaplotig	exon	15616336	15616353	100	-	.	Parent=FBgn0000455.1.mrna1;Target=FBgn0000455.1 1 18 +
ChrX	stalkie_big_nohaplotig	CDS	15615327	15616014	.	-	1	Parent=FBgn0000455.1.mrna1;Target=FBgn0000455.1 219 906 +
ChrX	stalkie_big_nohaplotig	CDS	15616072	15616271	.	-	0	Parent=FBgn0000455.1.mrna1;Target=FBgn0000455.1 19 218 +
ChrX	stalkie_big_nohaplotig	CDS	15616336	15616353	.	-	0	Parent=FBgn0000455.1.mrna1;Target=FBgn0000455.1 1 18 +
ChrX	gffcl	locus	15633891	15634353	.	-	.	ID=RLOC_00000906;geneIDs=Dv_FBgn0198975.1.path1;transcripts=Dv_FBgn0198975.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15633891	15634353	.	-	.	ID=Dv_FBgn0198975.1.mrna1;geneID=Dv_FBgn0198975.1.path1;Name=Dv_FBgn0198975.1;Dir=sensecoverage=100.0;identity=99.5;matches=400;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000906
ChrX	stalkie_big_nohaplotig	exon	15633891	15634134	99	-	.	Parent=Dv_FBgn0198975.1.mrna1;Target=Dv_FBgn0198975.1 159 402 +
ChrX	stalkie_big_nohaplotig	exon	15634196	15634353	99	-	.	Parent=Dv_FBgn0198975.1.mrna1;Target=Dv_FBgn0198975.1 1 158 +
ChrX	stalkie_big_nohaplotig	CDS	15633891	15634134	.	-	1	Parent=Dv_FBgn0198975.1.mrna1;Target=Dv_FBgn0198975.1 159 402 +
ChrX	stalkie_big_nohaplotig	CDS	15634196	15634353	.	-	0	Parent=Dv_FBgn0198975.1.mrna1;Target=Dv_FBgn0198975.1 1 158 +
ChrX	gffcl	locus	15720589	15721111	.	-	.	ID=RLOC_00000907;geneIDs=comp117366_c0_seq1.path1;transcripts=comp117366_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15720589	15721111	.	-	.	ID=comp117366_c0_seq1.mrna1;geneID=comp117366_c0_seq1.path1;Name=comp117366_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=519;mismatches=4;indels=0;unknowns=0;Target=comp117366_c0_seq1 523 1 .;CDS_Target=comp117366_c0_seq1 429 289 .;locus=RLOC_00000907
ChrX	stalkie_big_nohaplotig	exon	15720589	15721111	99	-	.	Parent=comp117366_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15720683	15720823	.	-	0	Parent=comp117366_c0_seq1.mrna1
ChrX	gffcl	locus	15721114	15868673	.	+	.	ID=RLOC_00000908;geneIDs=FBgn0262475.1.path1;transcripts=FBgn0262475.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15721114	15868673	.	+	.	ID=FBgn0262475.1.mrna1;geneID=FBgn0262475.1.path1;Name=FBgn0262475.1;Dir=sensecoverage=100.0;identity=99.8;matches=2173;mismatches=2;indels=3;unknowns=0;locus=RLOC_00000908
ChrX	stalkie_big_nohaplotig	exon	15721114	15721415	99	+	.	Parent=FBgn0262475.1.mrna1;Target=FBgn0262475.1 1 299 +
ChrX	stalkie_big_nohaplotig	exon	15738464	15738819	100	+	.	Parent=FBgn0262475.1.mrna1;Target=FBgn0262475.1 300 655 +
ChrX	stalkie_big_nohaplotig	exon	15742953	15743035	100	+	.	Parent=FBgn0262475.1.mrna1;Target=FBgn0262475.1 656 738 +
ChrX	stalkie_big_nohaplotig	exon	15750350	15750398	100	+	.	Parent=FBgn0262475.1.mrna1;Target=FBgn0262475.1 739 787 +
ChrX	stalkie_big_nohaplotig	exon	15843632	15843810	100	+	.	Parent=FBgn0262475.1.mrna1;Target=FBgn0262475.1 788 966 +
ChrX	stalkie_big_nohaplotig	exon	15852523	15853015	99	+	.	Parent=FBgn0262475.1.mrna1;Target=FBgn0262475.1 967 1459 +
ChrX	stalkie_big_nohaplotig	exon	15861679	15862032	100	+	.	Parent=FBgn0262475.1.mrna1;Target=FBgn0262475.1 1460 1813 +
ChrX	stalkie_big_nohaplotig	exon	15866039	15866137	100	+	.	Parent=FBgn0262475.1.mrna1;Target=FBgn0262475.1 1814 1912 +
ChrX	stalkie_big_nohaplotig	exon	15868411	15868673	99	+	.	Parent=FBgn0262475.1.mrna1;Target=FBgn0262475.1 1913 2175 +
ChrX	stalkie_big_nohaplotig	CDS	15721114	15721415	.	+	0	Parent=FBgn0262475.1.mrna1;Target=FBgn0262475.1 1 299 +
ChrX	stalkie_big_nohaplotig	CDS	15738464	15738819	.	+	1	Parent=FBgn0262475.1.mrna1;Target=FBgn0262475.1 300 655 +
ChrX	stalkie_big_nohaplotig	CDS	15742953	15743035	.	+	2	Parent=FBgn0262475.1.mrna1;Target=FBgn0262475.1 656 738 +
ChrX	stalkie_big_nohaplotig	CDS	15750350	15750398	.	+	0	Parent=FBgn0262475.1.mrna1;Target=FBgn0262475.1 739 787 +
ChrX	stalkie_big_nohaplotig	CDS	15843632	15843810	.	+	2	Parent=FBgn0262475.1.mrna1;Target=FBgn0262475.1 788 966 +
ChrX	stalkie_big_nohaplotig	CDS	15852523	15853015	.	+	0	Parent=FBgn0262475.1.mrna1;Target=FBgn0262475.1 967 1459 +
ChrX	stalkie_big_nohaplotig	CDS	15861679	15862032	.	+	2	Parent=FBgn0262475.1.mrna1;Target=FBgn0262475.1 1460 1813 +
ChrX	stalkie_big_nohaplotig	CDS	15866039	15866137	.	+	2	Parent=FBgn0262475.1.mrna1;Target=FBgn0262475.1 1814 1912 +
ChrX	stalkie_big_nohaplotig	CDS	15868411	15868673	.	+	2	Parent=FBgn0262475.1.mrna1;Target=FBgn0262475.1 1913 2175 +
ChrX	gffcl	locus	15775189	15778316	.	-	.	ID=RLOC_00000909;geneIDs=comp160317_c0_seq1.path1;transcripts=comp160317_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15775189	15778316	.	-	.	ID=comp160317_c0_seq1.mrna1;geneID=comp160317_c0_seq1.path1;Name=comp160317_c0_seq1;Dir=sensecoverage=99.9;identity=98.1;matches=1166;mismatches=22;indels=1;unknowns=0;locus=RLOC_00000909
ChrX	stalkie_big_nohaplotig	exon	15775189	15775534	97	-	.	Parent=comp160317_c0_seq1.mrna1;Target=comp160317_c0_seq1 845 1190 +
ChrX	stalkie_big_nohaplotig	exon	15777077	15777364	97	-	.	Parent=comp160317_c0_seq1.mrna1;Target=comp160317_c0_seq1 556 844 +
ChrX	stalkie_big_nohaplotig	exon	15777425	15777502	100	-	.	Parent=comp160317_c0_seq1.mrna1;Target=comp160317_c0_seq1 478 555 +
ChrX	stalkie_big_nohaplotig	exon	15777681	15777869	99	-	.	Parent=comp160317_c0_seq1.mrna1;Target=comp160317_c0_seq1 289 477 +
ChrX	stalkie_big_nohaplotig	exon	15778030	15778316	97	-	.	Parent=comp160317_c0_seq1.mrna1;Target=comp160317_c0_seq1 2 288 +
ChrX	stalkie_big_nohaplotig	CDS	15777180	15777364	.	-	0	Parent=comp160317_c0_seq1.mrna1;Target=comp160317_c0_seq1 556 741 +
ChrX	stalkie_big_nohaplotig	CDS	15777425	15777502	.	-	0	Parent=comp160317_c0_seq1.mrna1;Target=comp160317_c0_seq1 478 555 +
ChrX	stalkie_big_nohaplotig	CDS	15777681	15777683	.	-	0	Parent=comp160317_c0_seq1.mrna1;Target=comp160317_c0_seq1 475 477 +
ChrX	gffcl	locus	15940594	15941225	.	+	.	ID=RLOC_00000911;geneIDs=comp64026_c0_seq1.path1,comp92062_c0_seq1.path1;transcripts=comp64026_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15940856	15941225	.	+	.	ID=comp64026_c0_seq1.mrna1;geneID=comp64026_c0_seq1.path1;Name=comp64026_c0_seq1;Dir=indeterminatecoverage=97.6;identity=99.7;matches=369;mismatches=1;indels=0;unknowns=0;Target=comp64026_c0_seq1 379 10 .;CDS_Target=comp64026_c0_seq1 297 148 .;locus=RLOC_00000911
ChrX	stalkie_big_nohaplotig	exon	15940856	15941225	99	+	.	Parent=comp64026_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15940994	15941143	.	+	0	Parent=comp64026_c0_seq1.mrna1
ChrX	gffcl	locus	15941496	16010445	.	-	.	ID=RLOC_00000912;geneIDs=FBgn0043841.1.path1,comp50718_c0_seq1.path1,comp149635_c0_seq1.path1;transcripts=FBgn0043841.1.mrna1,comp149635_c0_seq1.mrna1,comp50718_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	15941496	16002729	.	-	.	ID=FBgn0043841.1.mrna1;geneID=FBgn0043841.1.path1;Name=FBgn0043841.1;Dir=sensecoverage=100.0;identity=98.5;matches=833;mismatches=7;indels=6;unknowns=0;locus=RLOC_00000912
ChrX	stalkie_big_nohaplotig	exon	15941496	15941807	97	-	.	Parent=FBgn0043841.1.mrna1;Target=FBgn0043841.1 535 840 +
ChrX	stalkie_big_nohaplotig	exon	15942625	15942755	97	-	.	Parent=FBgn0043841.1.mrna1;Target=FBgn0043841.1 404 534 +
ChrX	stalkie_big_nohaplotig	exon	15953707	15953877	98	-	.	Parent=FBgn0043841.1.mrna1;Target=FBgn0043841.1 233 403 +
ChrX	stalkie_big_nohaplotig	exon	16002217	16002307	100	-	.	Parent=FBgn0043841.1.mrna1;Target=FBgn0043841.1 142 232 +
ChrX	stalkie_big_nohaplotig	exon	16002589	16002729	100	-	.	Parent=FBgn0043841.1.mrna1;Target=FBgn0043841.1 1 141 +
ChrX	stalkie_big_nohaplotig	CDS	15941496	15941807	.	-	0	Parent=FBgn0043841.1.mrna1;Target=FBgn0043841.1 535 840 +
ChrX	stalkie_big_nohaplotig	CDS	15942625	15942755	.	-	2	Parent=FBgn0043841.1.mrna1;Target=FBgn0043841.1 404 534 +
ChrX	stalkie_big_nohaplotig	CDS	15953707	15953877	.	-	2	Parent=FBgn0043841.1.mrna1;Target=FBgn0043841.1 233 403 +
ChrX	stalkie_big_nohaplotig	CDS	16002217	16002307	.	-	0	Parent=FBgn0043841.1.mrna1;Target=FBgn0043841.1 142 232 +
ChrX	stalkie_big_nohaplotig	CDS	16002589	16002729	.	-	0	Parent=FBgn0043841.1.mrna1;Target=FBgn0043841.1 1 141 +
ChrX	stalkie_big_nohaplotig	mRNA	15941787	15942648	.	-	.	ID=comp149635_c0_seq1.mrna1;geneID=comp149635_c0_seq1.path1;Name=comp149635_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=853;mismatches=9;indels=4;unknowns=0;Target=comp149635_c0_seq1 866 1 .;CDS_Target=comp149635_c0_seq1 135 1 .;locus=RLOC_00000912
ChrX	stalkie_big_nohaplotig	exon	15941787	15942648	98	-	.	Parent=comp149635_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	15942518	15942648	.	-	0	Parent=comp149635_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16002284	16010445	.	-	.	ID=comp50718_c0_seq1.mrna1;geneID=comp50718_c0_seq1.path1;Name=comp50718_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=347;mismatches=0;indels=0;unknowns=0;Target=comp50718_c0_seq1 294 347 .;locus=RLOC_00000912
ChrX	stalkie_big_nohaplotig	exon	16002284	16002307	100	-	.	Parent=comp50718_c0_seq1.mrna1;Target=comp50718_c0_seq1 1 24 -
ChrX	stalkie_big_nohaplotig	exon	16010123	16010445	100	-	.	Parent=comp50718_c0_seq1.mrna1;Target=comp50718_c0_seq1 25 347 -
ChrX	stalkie_big_nohaplotig	CDS	16010392	16010445	.	-	0	Parent=comp50718_c0_seq1.mrna1
ChrX	gffcl	locus	16018963	16021834	.	+	.	ID=RLOC_00000914;geneIDs=FBgn0032428.1.path1;transcripts=FBgn0032428.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16018963	16021834	.	+	.	ID=FBgn0032428.1.mrna1;geneID=FBgn0032428.1.path1;Name=FBgn0032428.1;Dir=sensecoverage=100.0;identity=99.0;matches=1244;mismatches=13;indels=0;unknowns=0;locus=RLOC_00000914
ChrX	stalkie_big_nohaplotig	exon	16018963	16019138	98	+	.	Parent=FBgn0032428.1.mrna1;Target=FBgn0032428.1 1 176 +
ChrX	stalkie_big_nohaplotig	exon	16019708	16019867	99	+	.	Parent=FBgn0032428.1.mrna1;Target=FBgn0032428.1 177 336 +
ChrX	stalkie_big_nohaplotig	exon	16019932	16020072	99	+	.	Parent=FBgn0032428.1.mrna1;Target=FBgn0032428.1 337 477 +
ChrX	stalkie_big_nohaplotig	exon	16020605	16021078	98	+	.	Parent=FBgn0032428.1.mrna1;Target=FBgn0032428.1 478 951 +
ChrX	stalkie_big_nohaplotig	exon	16021529	16021834	99	+	.	Parent=FBgn0032428.1.mrna1;Target=FBgn0032428.1 952 1257 +
ChrX	stalkie_big_nohaplotig	CDS	16018999	16019138	.	+	0	Parent=FBgn0032428.1.mrna1;Target=FBgn0032428.1 37 176 +
ChrX	stalkie_big_nohaplotig	CDS	16019708	16019867	.	+	1	Parent=FBgn0032428.1.mrna1;Target=FBgn0032428.1 177 336 +
ChrX	stalkie_big_nohaplotig	CDS	16019932	16020072	.	+	0	Parent=FBgn0032428.1.mrna1;Target=FBgn0032428.1 337 477 +
ChrX	stalkie_big_nohaplotig	CDS	16020605	16021078	.	+	0	Parent=FBgn0032428.1.mrna1;Target=FBgn0032428.1 478 951 +
ChrX	stalkie_big_nohaplotig	CDS	16021529	16021834	.	+	0	Parent=FBgn0032428.1.mrna1;Target=FBgn0032428.1 952 1257 +
ChrX	gffcl	locus	16024970	16028419	.	-	.	ID=RLOC_00000915;geneIDs=FBgn0032429.1.path1;transcripts=FBgn0032429.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16024970	16028419	.	-	.	ID=FBgn0032429.1.mrna1;geneID=FBgn0032429.1.path1;Name=FBgn0032429.1;Dir=sensecoverage=92.2;identity=100.0;matches=260;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000915
ChrX	stalkie_big_nohaplotig	exon	16024970	16025122	100	-	.	Parent=FBgn0032429.1.mrna1;Target=FBgn0032429.1 130 282 +
ChrX	stalkie_big_nohaplotig	exon	16028313	16028419	100	-	.	Parent=FBgn0032429.1.mrna1;Target=FBgn0032429.1 23 129 +
ChrX	stalkie_big_nohaplotig	CDS	16024970	16025122	.	-	0	Parent=FBgn0032429.1.mrna1;Target=FBgn0032429.1 130 282 +
ChrX	stalkie_big_nohaplotig	CDS	16028313	16028417	.	-	0	Parent=FBgn0032429.1.mrna1;Target=FBgn0032429.1 25 129 +
ChrX	gffcl	locus	16033079	16034070	.	-	.	ID=RLOC_00000916;geneIDs=comp149459_c0_seq1.path1;transcripts=comp149459_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16033079	16034070	.	-	.	ID=comp149459_c0_seq1.mrna1;geneID=comp149459_c0_seq1.path1;Name=comp149459_c0_seq1;Dir=indeterminatecoverage=96.1;identity=99.7;matches=990;mismatches=2;indels=1;unknowns=0;Target=comp149459_c0_seq1 1033 41 .;CDS_Target=comp149459_c0_seq1 899 708 .;locus=RLOC_00000916
ChrX	stalkie_big_nohaplotig	exon	16033079	16034070	99	-	.	Parent=comp149459_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16033213	16033404	.	-	0	Parent=comp149459_c0_seq1.mrna1
ChrX	gffcl	locus	16035871	16036431	.	+	.	ID=RLOC_00000917;geneIDs=comp147842_c1_seq1.path1;transcripts=comp147842_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16035871	16036431	.	+	.	ID=comp147842_c1_seq1.mrna1;geneID=comp147842_c1_seq1.path1;Name=comp147842_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=560;mismatches=1;indels=9;unknowns=0;Target=comp147842_c1_seq1 570 1 .;CDS_Target=comp147842_c1_seq1 407 252 .;locus=RLOC_00000917
ChrX	stalkie_big_nohaplotig	exon	16035871	16036431	98	+	.	Parent=comp147842_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16036122	16036277	.	+	0	Parent=comp147842_c1_seq1.mrna1
ChrX	gffcl	locus	16037186	16037791	.	+	.	ID=RLOC_00000918;geneIDs=FBgn0000253.22.path1;transcripts=FBgn0000253.22.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16037186	16037791	.	+	.	ID=FBgn0000253.22.mrna1;geneID=FBgn0000253.22.path1;Name=FBgn0000253.22;Dir=indeterminatecoverage=100.0;identity=100.0;matches=606;mismatches=0;indels=0;unknowns=0;Target=FBgn0000253.22 606 1 .;locus=RLOC_00000918
ChrX	stalkie_big_nohaplotig	exon	16037186	16037791	100	+	.	Parent=FBgn0000253.22.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16037186	16037791	.	+	0	Parent=FBgn0000253.22.mrna1
ChrX	gffcl	locus	16047003	16047539	.	+	.	ID=RLOC_00000920;geneIDs=FBgn0000253.17.path1;transcripts=FBgn0000253.17.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16047003	16047539	.	+	.	ID=FBgn0000253.17.mrna1;geneID=FBgn0000253.17.path1;Name=FBgn0000253.17;Dir=indeterminatecoverage=100.0;identity=99.4;matches=534;mismatches=3;indels=0;unknowns=0;Target=FBgn0000253.17 537 1 .;locus=RLOC_00000920
ChrX	stalkie_big_nohaplotig	exon	16047003	16047539	99	+	.	Parent=FBgn0000253.17.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16047003	16047539	.	+	0	Parent=FBgn0000253.17.mrna1
ChrX	gffcl	locus	16048621	16049184	.	+	.	ID=RLOC_00000921;geneIDs=FBgn0000253.12.path1;transcripts=FBgn0000253.12.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16048621	16049184	.	+	.	ID=FBgn0000253.12.mrna1;geneID=FBgn0000253.12.path1;Name=FBgn0000253.12;Dir=indeterminatecoverage=100.0;identity=100.0;matches=564;mismatches=0;indels=0;unknowns=0;Target=FBgn0000253.12 564 1 .;locus=RLOC_00000921
ChrX	stalkie_big_nohaplotig	exon	16048621	16049184	100	+	.	Parent=FBgn0000253.12.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16048621	16049184	.	+	0	Parent=FBgn0000253.12.mrna1
ChrX	gffcl	locus	16065888	16081808	.	+	.	ID=RLOC_00000922;geneIDs=FBgn0051665.2.path1;transcripts=FBgn0051665.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16065888	16081808	.	+	.	ID=FBgn0051665.2.mrna1;geneID=FBgn0051665.2.path1;Name=FBgn0051665.2;Dir=sensecoverage=100.0;identity=99.5;matches=2341;mismatches=11;indels=0;unknowns=0;locus=RLOC_00000922
ChrX	stalkie_big_nohaplotig	exon	16065888	16066505	99	+	.	Parent=FBgn0051665.2.mrna1;Target=FBgn0051665.2 1 618 +
ChrX	stalkie_big_nohaplotig	exon	16077728	16077879	100	+	.	Parent=FBgn0051665.2.mrna1;Target=FBgn0051665.2 619 770 +
ChrX	stalkie_big_nohaplotig	exon	16078874	16079034	99	+	.	Parent=FBgn0051665.2.mrna1;Target=FBgn0051665.2 771 931 +
ChrX	stalkie_big_nohaplotig	exon	16079295	16079567	99	+	.	Parent=FBgn0051665.2.mrna1;Target=FBgn0051665.2 932 1204 +
ChrX	stalkie_big_nohaplotig	exon	16079861	16079957	100	+	.	Parent=FBgn0051665.2.mrna1;Target=FBgn0051665.2 1205 1301 +
ChrX	stalkie_big_nohaplotig	exon	16080074	16080201	99	+	.	Parent=FBgn0051665.2.mrna1;Target=FBgn0051665.2 1302 1429 +
ChrX	stalkie_big_nohaplotig	exon	16080320	16080462	98	+	.	Parent=FBgn0051665.2.mrna1;Target=FBgn0051665.2 1430 1572 +
ChrX	stalkie_big_nohaplotig	exon	16080531	16080647	98	+	.	Parent=FBgn0051665.2.mrna1;Target=FBgn0051665.2 1573 1689 +
ChrX	stalkie_big_nohaplotig	exon	16080804	16080906	100	+	.	Parent=FBgn0051665.2.mrna1;Target=FBgn0051665.2 1690 1792 +
ChrX	stalkie_big_nohaplotig	exon	16080992	16081188	100	+	.	Parent=FBgn0051665.2.mrna1;Target=FBgn0051665.2 1793 1989 +
ChrX	stalkie_big_nohaplotig	exon	16081446	16081808	100	+	.	Parent=FBgn0051665.2.mrna1;Target=FBgn0051665.2 1990 2352 +
ChrX	stalkie_big_nohaplotig	CDS	16065888	16066505	.	+	0	Parent=FBgn0051665.2.mrna1;Target=FBgn0051665.2 1 618 +
ChrX	stalkie_big_nohaplotig	CDS	16077728	16077879	.	+	0	Parent=FBgn0051665.2.mrna1;Target=FBgn0051665.2 619 770 +
ChrX	stalkie_big_nohaplotig	CDS	16078874	16079034	.	+	1	Parent=FBgn0051665.2.mrna1;Target=FBgn0051665.2 771 931 +
ChrX	stalkie_big_nohaplotig	CDS	16079295	16079567	.	+	2	Parent=FBgn0051665.2.mrna1;Target=FBgn0051665.2 932 1204 +
ChrX	stalkie_big_nohaplotig	CDS	16079861	16079957	.	+	2	Parent=FBgn0051665.2.mrna1;Target=FBgn0051665.2 1205 1301 +
ChrX	stalkie_big_nohaplotig	CDS	16080074	16080201	.	+	1	Parent=FBgn0051665.2.mrna1;Target=FBgn0051665.2 1302 1429 +
ChrX	stalkie_big_nohaplotig	CDS	16080320	16080462	.	+	2	Parent=FBgn0051665.2.mrna1;Target=FBgn0051665.2 1430 1572 +
ChrX	stalkie_big_nohaplotig	CDS	16080531	16080647	.	+	0	Parent=FBgn0051665.2.mrna1;Target=FBgn0051665.2 1573 1689 +
ChrX	stalkie_big_nohaplotig	CDS	16080804	16080906	.	+	0	Parent=FBgn0051665.2.mrna1;Target=FBgn0051665.2 1690 1792 +
ChrX	stalkie_big_nohaplotig	CDS	16080992	16081188	.	+	2	Parent=FBgn0051665.2.mrna1;Target=FBgn0051665.2 1793 1989 +
ChrX	stalkie_big_nohaplotig	CDS	16081446	16081808	.	+	0	Parent=FBgn0051665.2.mrna1;Target=FBgn0051665.2 1990 2352 +
ChrX	gffcl	locus	16096642	16097328	.	-	.	ID=RLOC_00000923;geneIDs=FBgn0000253.20.path1;transcripts=FBgn0000253.20.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16096642	16097328	.	-	.	ID=FBgn0000253.20.mrna1;geneID=FBgn0000253.20.path1;Name=FBgn0000253.20;Dir=indeterminatecoverage=100.0;identity=99.9;matches=686;mismatches=1;indels=0;unknowns=0;Target=FBgn0000253.20 687 1 .;locus=RLOC_00000923
ChrX	stalkie_big_nohaplotig	exon	16096642	16097328	99	-	.	Parent=FBgn0000253.20.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16096642	16097328	.	-	0	Parent=FBgn0000253.20.mrna1
ChrX	gffcl	locus	16115599	16116123	.	-	.	ID=RLOC_00000924;geneIDs=FBgn0000253.4.path1;transcripts=FBgn0000253.4.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16115599	16116123	.	-	.	ID=FBgn0000253.4.mrna1;geneID=FBgn0000253.4.path1;Name=FBgn0000253.4;Dir=indeterminatecoverage=100.0;identity=99.8;matches=524;mismatches=1;indels=0;unknowns=0;Target=FBgn0000253.4 525 1 .;locus=RLOC_00000924
ChrX	stalkie_big_nohaplotig	exon	16115599	16116123	99	-	.	Parent=FBgn0000253.4.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16115599	16116123	.	-	0	Parent=FBgn0000253.4.mrna1
ChrX	gffcl	locus	16131979	16132936	.	+	.	ID=RLOC_00000926;geneIDs=FBgn0015789.1.path1;transcripts=FBgn0015789.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16131979	16132936	.	+	.	ID=FBgn0015789.1.mrna1;geneID=FBgn0015789.1.path1;Name=FBgn0015789.1;Dir=sensecoverage=100.0;identity=99.5;matches=663;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000926
ChrX	stalkie_big_nohaplotig	exon	16131979	16132159	98	+	.	Parent=FBgn0015789.1.mrna1;Target=FBgn0015789.1 1 181 +
ChrX	stalkie_big_nohaplotig	exon	16132262	16132461	99	+	.	Parent=FBgn0015789.1.mrna1;Target=FBgn0015789.1 182 381 +
ChrX	stalkie_big_nohaplotig	exon	16132595	16132684	100	+	.	Parent=FBgn0015789.1.mrna1;Target=FBgn0015789.1 382 471 +
ChrX	stalkie_big_nohaplotig	exon	16132742	16132936	100	+	.	Parent=FBgn0015789.1.mrna1;Target=FBgn0015789.1 472 666 +
ChrX	stalkie_big_nohaplotig	CDS	16131979	16132159	.	+	0	Parent=FBgn0015789.1.mrna1;Target=FBgn0015789.1 1 181 +
ChrX	stalkie_big_nohaplotig	CDS	16132262	16132461	.	+	2	Parent=FBgn0015789.1.mrna1;Target=FBgn0015789.1 182 381 +
ChrX	stalkie_big_nohaplotig	CDS	16132595	16132684	.	+	0	Parent=FBgn0015789.1.mrna1;Target=FBgn0015789.1 382 471 +
ChrX	stalkie_big_nohaplotig	CDS	16132742	16132936	.	+	0	Parent=FBgn0015789.1.mrna1;Target=FBgn0015789.1 472 666 +
ChrX	gffcl	locus	16151536	16157464	.	-	.	ID=RLOC_00000927;geneIDs=comp163795_c1_seq1.path1;transcripts=comp163795_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16151536	16157464	.	-	.	ID=comp163795_c1_seq1.mrna1;geneID=comp163795_c1_seq1.path1;Name=comp163795_c1_seq1;Dir=sensecoverage=94.5;identity=93.0;matches=3264;mismatches=85;indels=161;unknowns=0;Target=comp163795_c1_seq1 2309 2536 +;locus=RLOC_00000927
ChrX	stalkie_big_nohaplotig	exon	16151536	16152057	76	-	.	Parent=comp163795_c1_seq1.mrna1;Target=comp163795_c1_seq1 2854 3485 +
ChrX	stalkie_big_nohaplotig	exon	16152182	16153499	97	-	.	Parent=comp163795_c1_seq1.mrna1;Target=comp163795_c1_seq1 1536 2853 +
ChrX	stalkie_big_nohaplotig	exon	16154407	16155198	98	-	.	Parent=comp163795_c1_seq1.mrna1;Target=comp163795_c1_seq1 744 1535 +
ChrX	stalkie_big_nohaplotig	exon	16156590	16156760	94	-	.	Parent=comp163795_c1_seq1.mrna1;Target=comp163795_c1_seq1 573 743 +
ChrX	stalkie_big_nohaplotig	exon	16156894	16157464	93	-	.	Parent=comp163795_c1_seq1.mrna1;Target=comp163795_c1_seq1 1 572 +
ChrX	stalkie_big_nohaplotig	CDS	16152499	16152726	.	-	0	Parent=comp163795_c1_seq1.mrna1
ChrX	gffcl	locus	16173742	16180689	.	-	.	ID=RLOC_00000928;geneIDs=comp154105_c0_seq1.path1,comp158940_c0_seq1.path1;transcripts=comp154105_c0_seq1.mrna1,comp158940_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16173742	16180211	.	-	.	ID=comp154105_c0_seq1.mrna1;geneID=comp154105_c0_seq1.path1;Name=comp154105_c0_seq1;Dir=antisensecoverage=99.7;identity=99.7;matches=1027;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000928
ChrX	stalkie_big_nohaplotig	exon	16173742	16174226	100	-	.	Parent=comp154105_c0_seq1.mrna1;Target=comp154105_c0_seq1 3 487 -
ChrX	stalkie_big_nohaplotig	exon	16174352	16174605	99	-	.	Parent=comp154105_c0_seq1.mrna1;Target=comp154105_c0_seq1 488 741 -
ChrX	stalkie_big_nohaplotig	exon	16174667	16174934	99	-	.	Parent=comp154105_c0_seq1.mrna1;Target=comp154105_c0_seq1 742 1009 -
ChrX	stalkie_big_nohaplotig	exon	16180189	16180211	95	-	.	Parent=comp154105_c0_seq1.mrna1;Target=comp154105_c0_seq1 1010 1032 -
ChrX	stalkie_big_nohaplotig	CDS	16174220	16174226	.	-	1	Parent=comp154105_c0_seq1.mrna1;Target=comp154105_c0_seq1 481 487 .
ChrX	stalkie_big_nohaplotig	CDS	16174352	16174605	.	-	0	Parent=comp154105_c0_seq1.mrna1;Target=comp154105_c0_seq1 488 741 .
ChrX	stalkie_big_nohaplotig	CDS	16174667	16174852	.	-	0	Parent=comp154105_c0_seq1.mrna1;Target=comp154105_c0_seq1 742 927 .
ChrX	stalkie_big_nohaplotig	mRNA	16179569	16180689	.	-	.	ID=comp158940_c0_seq1.mrna1;geneID=comp158940_c0_seq1.path1;Name=comp158940_c0_seq1;Dir=indeterminatecoverage=78.6;identity=96.8;matches=1092;mismatches=29;indels=7;unknowns=0;Target=comp158940_c0_seq1 1436 309 .;CDS_Target=comp158940_c0_seq1 1184 969 .;locus=RLOC_00000928
ChrX	stalkie_big_nohaplotig	exon	16179569	16180689	96	-	.	Parent=comp158940_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16179821	16180036	.	-	0	Parent=comp158940_c0_seq1.mrna1
ChrX	gffcl	locus	16217068	16218069	.	+	.	ID=RLOC_00000930;geneIDs=comp156545_c0_seq1.path1;transcripts=comp156545_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16217068	16218069	.	+	.	ID=comp156545_c0_seq1.mrna1;geneID=comp156545_c0_seq1.path1;Name=comp156545_c0_seq1;Dir=sensecoverage=99.9;identity=96.4;matches=760;mismatches=12;indels=16;unknowns=0;Target=comp156545_c0_seq1 454 681 +;locus=RLOC_00000930
ChrX	stalkie_big_nohaplotig	exon	16217068	16217283	97	+	.	Parent=comp156545_c0_seq1.mrna1;Target=comp156545_c0_seq1 1 220 +
ChrX	stalkie_big_nohaplotig	exon	16217514	16218069	95	+	.	Parent=comp156545_c0_seq1.mrna1;Target=comp156545_c0_seq1 221 788 +
ChrX	stalkie_big_nohaplotig	CDS	16217735	16217962	.	+	0	Parent=comp156545_c0_seq1.mrna1
ChrX	gffcl	locus	16238202	16238696	.	-	.	ID=RLOC_00000931;geneIDs=FBgn0000253.1.path1;transcripts=FBgn0000253.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16238202	16238696	.	-	.	ID=FBgn0000253.1.mrna1;geneID=FBgn0000253.1.path1;Name=FBgn0000253.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=494;mismatches=1;indels=0;unknowns=0;Target=FBgn0000253.1 495 1 .;locus=RLOC_00000931
ChrX	stalkie_big_nohaplotig	exon	16238202	16238696	99	-	.	Parent=FBgn0000253.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16238202	16238696	.	-	0	Parent=FBgn0000253.1.mrna1
ChrX	gffcl	locus	16241208	16243334	.	+	.	ID=RLOC_00000932;geneIDs=FBgn0010356.1.path1;transcripts=FBgn0010356.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16241208	16243334	.	+	.	ID=FBgn0010356.1.mrna1;geneID=FBgn0010356.1.path1;Name=FBgn0010356.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2125;mismatches=2;indels=0;unknowns=0;Target=FBgn0010356.1 2127 1 .;locus=RLOC_00000932
ChrX	stalkie_big_nohaplotig	exon	16241208	16243334	99	+	.	Parent=FBgn0010356.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16241208	16243334	.	+	0	Parent=FBgn0010356.1.mrna1
ChrX	gffcl	locus	16246832	16250635	.	+	.	ID=RLOC_00000933;geneIDs=FBgn0011638.1.path1;transcripts=FBgn0011638.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16246832	16250635	.	+	.	ID=FBgn0011638.1.mrna1;geneID=FBgn0011638.1.path1;Name=FBgn0011638.1;Dir=sensecoverage=100.0;identity=100.0;matches=3057;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000933
ChrX	stalkie_big_nohaplotig	exon	16246832	16247393	100	+	.	Parent=FBgn0011638.1.mrna1;Target=FBgn0011638.1 1 562 +
ChrX	stalkie_big_nohaplotig	exon	16247880	16247935	100	+	.	Parent=FBgn0011638.1.mrna1;Target=FBgn0011638.1 563 618 +
ChrX	stalkie_big_nohaplotig	exon	16248068	16250020	100	+	.	Parent=FBgn0011638.1.mrna1;Target=FBgn0011638.1 619 2571 +
ChrX	stalkie_big_nohaplotig	exon	16250081	16250395	100	+	.	Parent=FBgn0011638.1.mrna1;Target=FBgn0011638.1 2572 2886 +
ChrX	stalkie_big_nohaplotig	exon	16250465	16250635	100	+	.	Parent=FBgn0011638.1.mrna1;Target=FBgn0011638.1 2887 3057 +
ChrX	stalkie_big_nohaplotig	CDS	16246832	16247393	.	+	0	Parent=FBgn0011638.1.mrna1;Target=FBgn0011638.1 1 562 +
ChrX	stalkie_big_nohaplotig	CDS	16247880	16247935	.	+	2	Parent=FBgn0011638.1.mrna1;Target=FBgn0011638.1 563 618 +
ChrX	stalkie_big_nohaplotig	CDS	16248068	16250020	.	+	0	Parent=FBgn0011638.1.mrna1;Target=FBgn0011638.1 619 2571 +
ChrX	stalkie_big_nohaplotig	CDS	16250081	16250395	.	+	0	Parent=FBgn0011638.1.mrna1;Target=FBgn0011638.1 2572 2886 +
ChrX	stalkie_big_nohaplotig	CDS	16250465	16250635	.	+	0	Parent=FBgn0011638.1.mrna1;Target=FBgn0011638.1 2887 3057 +
ChrX	gffcl	locus	16254101	16254880	.	+	.	ID=RLOC_00000934;geneIDs=comp152553_c0_seq1.path1;transcripts=comp152553_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16254101	16254880	.	+	.	ID=comp152553_c0_seq1.mrna1;geneID=comp152553_c0_seq1.path1;Name=comp152553_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=770;mismatches=10;indels=0;unknowns=0;Target=comp152553_c0_seq1 780 1 .;CDS_Target=comp152553_c0_seq1 417 331 .;locus=RLOC_00000934
ChrX	stalkie_big_nohaplotig	exon	16254101	16254880	98	+	.	Parent=comp152553_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16254431	16254517	.	+	0	Parent=comp152553_c0_seq1.mrna1
ChrX	gffcl	locus	16306821	16311844	.	+	.	ID=RLOC_00000936;geneIDs=comp146802_c0_seq1.path1;transcripts=comp146802_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16306821	16311844	.	+	.	ID=comp146802_c0_seq1.mrna1;geneID=comp146802_c0_seq1.path1;Name=comp146802_c0_seq1;Dir=sensecoverage=99.6;identity=98.7;matches=777;mismatches=9;indels=1;unknowns=0;locus=RLOC_00000936
ChrX	stalkie_big_nohaplotig	exon	16306821	16306977	94	+	.	Parent=comp146802_c0_seq1.mrna1;Target=comp146802_c0_seq1 2 158 +
ChrX	stalkie_big_nohaplotig	exon	16311146	16311202	100	+	.	Parent=comp146802_c0_seq1.mrna1;Target=comp146802_c0_seq1 159 215 +
ChrX	stalkie_big_nohaplotig	exon	16311273	16311844	99	+	.	Parent=comp146802_c0_seq1.mrna1;Target=comp146802_c0_seq1 216 788 +
ChrX	stalkie_big_nohaplotig	CDS	16311196	16311202	.	+	0	Parent=comp146802_c0_seq1.mrna1;Target=comp146802_c0_seq1 209 215 +
ChrX	stalkie_big_nohaplotig	CDS	16311273	16311781	.	+	2	Parent=comp146802_c0_seq1.mrna1;Target=comp146802_c0_seq1 216 724 +
ChrX	gffcl	locus	16320774	16321458	.	-	.	ID=RLOC_00000937;geneIDs=comp154942_c0_seq1.path1;transcripts=comp154942_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16320774	16321458	.	-	.	ID=comp154942_c0_seq1.mrna1;geneID=comp154942_c0_seq1.path1;Name=comp154942_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=620;mismatches=12;indels=5;unknowns=0;Target=comp154942_c0_seq1 154 2 .;locus=RLOC_00000937
ChrX	stalkie_big_nohaplotig	exon	16320774	16321115	96	-	.	Parent=comp154942_c0_seq1.mrna1;Target=comp154942_c0_seq1 637 291 .
ChrX	stalkie_big_nohaplotig	exon	16321169	16321458	98	-	.	Parent=comp154942_c0_seq1.mrna1;Target=comp154942_c0_seq1 290 1 .
ChrX	stalkie_big_nohaplotig	CDS	16321305	16321457	.	-	0	Parent=comp154942_c0_seq1.mrna1
ChrX	gffcl	locus	16328926	16329591	.	+	.	ID=RLOC_00000938;geneIDs=comp139580_c0_seq1.path1;transcripts=comp139580_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16328926	16329591	.	+	.	ID=comp139580_c0_seq1.mrna1;geneID=comp139580_c0_seq1.path1;Name=comp139580_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=349;mismatches=2;indels=0;unknowns=0;Target=comp139580_c0_seq1 12 83 .;locus=RLOC_00000938
ChrX	stalkie_big_nohaplotig	exon	16328926	16329020	100	+	.	Parent=comp139580_c0_seq1.mrna1;Target=comp139580_c0_seq1 257 351 -
ChrX	stalkie_big_nohaplotig	exon	16329336	16329591	99	+	.	Parent=comp139580_c0_seq1.mrna1;Target=comp139580_c0_seq1 1 256 -
ChrX	stalkie_big_nohaplotig	CDS	16329509	16329580	.	+	0	Parent=comp139580_c0_seq1.mrna1
ChrX	gffcl	locus	16332829	16334165	.	-	.	ID=RLOC_00000939;geneIDs=FBgn0053208.path1;transcripts=FBgn0053208.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16332829	16334165	.	-	.	ID=FBgn0053208.mrna1;geneID=FBgn0053208.path1;Name=FBgn0053208;Dir=sensecoverage=100.0;identity=99.9;matches=1271;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000939
ChrX	stalkie_big_nohaplotig	exon	16332829	16333149	100	-	.	Parent=FBgn0053208.mrna1;Target=FBgn0053208 952 1272 +
ChrX	stalkie_big_nohaplotig	exon	16333215	16334165	99	-	.	Parent=FBgn0053208.mrna1;Target=FBgn0053208 1 951 +
ChrX	stalkie_big_nohaplotig	CDS	16332829	16333149	.	-	0	Parent=FBgn0053208.mrna1;Target=FBgn0053208 952 1272 +
ChrX	stalkie_big_nohaplotig	CDS	16333215	16334165	.	-	0	Parent=FBgn0053208.mrna1;Target=FBgn0053208 1 951 +
ChrX	gffcl	locus	16338340	16435692	.	.	.	ID=RLOC_00000940;geneIDs=comp99299_c0_seq1.path1,comp153743_c0_seq1.path1;transcripts=comp153743_c0_seq1.mrna1,comp99299_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16338340	16435692	.	+	.	ID=comp153743_c0_seq1.mrna1;geneID=comp153743_c0_seq1.path1;Name=comp153743_c0_seq1;Dir=antisensecoverage=81.1;identity=92.9;matches=889;mismatches=33;indels=35;unknowns=0;locus=RLOC_00000940
ChrX	stalkie_big_nohaplotig	exon	16338340	16338648	99	+	.	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 949 1257 -
ChrX	stalkie_big_nohaplotig	exon	16349711	16350155	99	+	.	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 504 948 -
ChrX	stalkie_big_nohaplotig	exon	16352406	16352408	100	+	.	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 501 503 -
ChrX	stalkie_big_nohaplotig	exon	16355558	16355562	100	+	.	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 490 494 -
ChrX	stalkie_big_nohaplotig	exon	16357252	16357257	100	+	.	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 484 489 -
ChrX	stalkie_big_nohaplotig	exon	16366537	16366542	100	+	.	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 478 483 -
ChrX	stalkie_big_nohaplotig	exon	16373460	16373468	100	+	.	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 425 433 -
ChrX	stalkie_big_nohaplotig	exon	16399742	16399777	47	+	.	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 362 424 -
ChrX	stalkie_big_nohaplotig	exon	16407359	16407362	100	+	.	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 358 361 -
ChrX	stalkie_big_nohaplotig	exon	16412836	16412903	58	+	.	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 276 335 -
ChrX	stalkie_big_nohaplotig	exon	16421083	16421089	85	+	.	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 269 275 -
ChrX	stalkie_big_nohaplotig	exon	16425492	16425496	100	+	.	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 264 268 -
ChrX	stalkie_big_nohaplotig	exon	16431736	16431738	100	+	.	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 261 263 -
ChrX	stalkie_big_nohaplotig	exon	16433422	16433433	83	+	.	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 249 260 -
ChrX	stalkie_big_nohaplotig	exon	16434393	16434400	100	+	.	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 241 248 -
ChrX	stalkie_big_nohaplotig	exon	16435690	16435692	100	+	.	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 238 240 -
ChrX	stalkie_big_nohaplotig	CDS	16349843	16350155	.	+	0	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 504 816 .
ChrX	stalkie_big_nohaplotig	CDS	16352406	16352408	.	+	2	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 501 503 .
ChrX	stalkie_big_nohaplotig	CDS	16355558	16355562	.	+	2	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 490 494 .
ChrX	stalkie_big_nohaplotig	CDS	16357252	16357257	.	+	0	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 484 489 .
ChrX	stalkie_big_nohaplotig	CDS	16366537	16366542	.	+	0	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 478 483 .
ChrX	stalkie_big_nohaplotig	CDS	16373460	16373468	.	+	0	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 425 433 .
ChrX	stalkie_big_nohaplotig	CDS	16399742	16399777	.	+	0	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 362 424 .
ChrX	stalkie_big_nohaplotig	CDS	16407359	16407362	.	+	0	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 358 361 .
ChrX	stalkie_big_nohaplotig	CDS	16412836	16412903	.	+	2	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 276 335 .
ChrX	stalkie_big_nohaplotig	CDS	16421083	16421089	.	+	0	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 269 275 .
ChrX	stalkie_big_nohaplotig	CDS	16425492	16425496	.	+	2	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 264 268 .
ChrX	stalkie_big_nohaplotig	CDS	16431736	16431738	.	+	0	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 261 263 .
ChrX	stalkie_big_nohaplotig	CDS	16433422	16433433	.	+	0	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 249 260 .
ChrX	stalkie_big_nohaplotig	CDS	16434393	16434400	.	+	0	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 241 248 .
ChrX	stalkie_big_nohaplotig	CDS	16435690	16435692	.	+	1	Parent=comp153743_c0_seq1.mrna1;Target=comp153743_c0_seq1 238 240 .
ChrX	stalkie_big_nohaplotig	mRNA	16350139	16350576	.	-	.	ID=comp99299_c0_seq1.mrna1;geneID=comp99299_c0_seq1.path1;Name=comp99299_c0_seq1;Dir=indeterminatecoverage=99.5;identity=100.0;matches=438;mismatches=0;indels=0;unknowns=0;Target=comp99299_c0_seq1 440 3 .;CDS_Target=comp99299_c0_seq1 262 5 .;locus=RLOC_00000940
ChrX	stalkie_big_nohaplotig	exon	16350139	16350576	100	-	.	Parent=comp99299_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16350317	16350574	.	-	0	Parent=comp99299_c0_seq1.mrna1
ChrX	gffcl	locus	16381508	16382581	.	-	.	ID=RLOC_00000942;geneIDs=comp156755_c0_seq1.path1;transcripts=comp156755_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16381508	16382581	.	-	.	ID=comp156755_c0_seq1.mrna1;geneID=comp156755_c0_seq1.path1;Name=comp156755_c0_seq1;Dir=indeterminatecoverage=99.5;identity=96.7;matches=1061;mismatches=11;indels=25;unknowns=0;Target=comp156755_c0_seq1 1100 6 .;CDS_Target=comp156755_c0_seq1 901 848 .;locus=RLOC_00000942
ChrX	stalkie_big_nohaplotig	exon	16381508	16382581	96	-	.	Parent=comp156755_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16381694	16381737	.	-	0	Parent=comp156755_c0_seq1.mrna1
ChrX	gffcl	locus	16395560	16437302	.	-	.	ID=RLOC_00000943;geneIDs=FBgn0051663.1.path1;transcripts=FBgn0051663.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16395560	16437302	.	-	.	ID=FBgn0051663.1.mrna1;geneID=FBgn0051663.1.path1;Name=FBgn0051663.1;Dir=sensecoverage=100.0;identity=99.8;matches=2813;mismatches=7;indels=0;unknowns=0;locus=RLOC_00000943
ChrX	stalkie_big_nohaplotig	exon	16395560	16395706	100	-	.	Parent=FBgn0051663.1.mrna1;Target=FBgn0051663.1 2674 2820 +
ChrX	stalkie_big_nohaplotig	exon	16402481	16402588	100	-	.	Parent=FBgn0051663.1.mrna1;Target=FBgn0051663.1 2566 2673 +
ChrX	stalkie_big_nohaplotig	exon	16407978	16408259	100	-	.	Parent=FBgn0051663.1.mrna1;Target=FBgn0051663.1 2284 2565 +
ChrX	stalkie_big_nohaplotig	exon	16409371	16409687	99	-	.	Parent=FBgn0051663.1.mrna1;Target=FBgn0051663.1 1967 2283 +
ChrX	stalkie_big_nohaplotig	exon	16412143	16412294	100	-	.	Parent=FBgn0051663.1.mrna1;Target=FBgn0051663.1 1815 1966 +
ChrX	stalkie_big_nohaplotig	exon	16412796	16412940	100	-	.	Parent=FBgn0051663.1.mrna1;Target=FBgn0051663.1 1670 1814 +
ChrX	stalkie_big_nohaplotig	exon	16413015	16413842	99	-	.	Parent=FBgn0051663.1.mrna1;Target=FBgn0051663.1 842 1669 +
ChrX	stalkie_big_nohaplotig	exon	16414249	16414663	98	-	.	Parent=FBgn0051663.1.mrna1;Target=FBgn0051663.1 427 841 +
ChrX	stalkie_big_nohaplotig	exon	16421075	16421238	100	-	.	Parent=FBgn0051663.1.mrna1;Target=FBgn0051663.1 263 426 +
ChrX	stalkie_big_nohaplotig	exon	16425827	16425949	100	-	.	Parent=FBgn0051663.1.mrna1;Target=FBgn0051663.1 140 262 +
ChrX	stalkie_big_nohaplotig	exon	16437164	16437302	100	-	.	Parent=FBgn0051663.1.mrna1;Target=FBgn0051663.1 1 139 +
ChrX	stalkie_big_nohaplotig	CDS	16395560	16395706	.	-	0	Parent=FBgn0051663.1.mrna1;Target=FBgn0051663.1 2674 2820 +
ChrX	stalkie_big_nohaplotig	CDS	16402481	16402588	.	-	0	Parent=FBgn0051663.1.mrna1;Target=FBgn0051663.1 2566 2673 +
ChrX	stalkie_big_nohaplotig	CDS	16407978	16408259	.	-	0	Parent=FBgn0051663.1.mrna1;Target=FBgn0051663.1 2284 2565 +
ChrX	stalkie_big_nohaplotig	CDS	16409371	16409687	.	-	2	Parent=FBgn0051663.1.mrna1;Target=FBgn0051663.1 1967 2283 +
ChrX	stalkie_big_nohaplotig	CDS	16412143	16412294	.	-	1	Parent=FBgn0051663.1.mrna1;Target=FBgn0051663.1 1815 1966 +
ChrX	stalkie_big_nohaplotig	CDS	16412796	16412940	.	-	2	Parent=FBgn0051663.1.mrna1;Target=FBgn0051663.1 1670 1814 +
ChrX	stalkie_big_nohaplotig	CDS	16413015	16413842	.	-	2	Parent=FBgn0051663.1.mrna1;Target=FBgn0051663.1 842 1669 +
ChrX	stalkie_big_nohaplotig	CDS	16414249	16414663	.	-	0	Parent=FBgn0051663.1.mrna1;Target=FBgn0051663.1 427 841 +
ChrX	stalkie_big_nohaplotig	CDS	16421075	16421238	.	-	2	Parent=FBgn0051663.1.mrna1;Target=FBgn0051663.1 263 426 +
ChrX	stalkie_big_nohaplotig	CDS	16425827	16425949	.	-	2	Parent=FBgn0051663.1.mrna1;Target=FBgn0051663.1 140 262 +
ChrX	stalkie_big_nohaplotig	CDS	16437164	16437302	.	-	0	Parent=FBgn0051663.1.mrna1;Target=FBgn0051663.1 1 139 +
ChrX	gffcl	locus	16398107	16398804	.	-	.	ID=RLOC_00000944;geneIDs=comp149263_c1_seq1.path1;transcripts=comp149263_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16398107	16398804	.	-	.	ID=comp149263_c1_seq1.mrna1;geneID=comp149263_c1_seq1.path1;Name=comp149263_c1_seq1;Dir=indeterminatecoverage=95.2;identity=92.4;matches=645;mismatches=7;indels=46;unknowns=0;Target=comp149263_c1_seq1 652 1 .;CDS_Target=comp149263_c1_seq1 441 331 .;locus=RLOC_00000944
ChrX	stalkie_big_nohaplotig	exon	16398107	16398804	92	-	.	Parent=comp149263_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16398318	16398428	.	-	0	Parent=comp149263_c1_seq1.mrna1
ChrX	gffcl	locus	16438838	16439602	.	+	.	ID=RLOC_00000945;geneIDs=comp135016_c0_seq1.path1;transcripts=comp135016_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16438838	16439602	.	+	.	ID=comp135016_c0_seq1.mrna1;geneID=comp135016_c0_seq1.path1;Name=comp135016_c0_seq1;Dir=indeterminatecoverage=97.7;identity=99.5;matches=761;mismatches=4;indels=0;unknowns=0;Target=comp135016_c0_seq1 765 1 .;CDS_Target=comp135016_c0_seq1 333 160 .;locus=RLOC_00000945
ChrX	stalkie_big_nohaplotig	exon	16438838	16439602	99	+	.	Parent=comp135016_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16438997	16439170	.	+	0	Parent=comp135016_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16480024	16953382	.	+	.	ID=comp158628_c0_seq1.mrna1;geneID=comp158628_c0_seq1.path1;Name=comp158628_c0_seq1;Dir=antisensecoverage=98.2;identity=97.6;matches=6625;mismatches=43;indels=118;unknowns=0;locus=RLOC_00000946
ChrX	stalkie_big_nohaplotig	exon	16480024	16481835	99	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5797 7608 -
ChrX	stalkie_big_nohaplotig	exon	16481911	16481935	40	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5787 5796 -
ChrX	stalkie_big_nohaplotig	exon	16489762	16489763	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5785 5786 -
ChrX	stalkie_big_nohaplotig	exon	16498158	16498165	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5777 5784 -
ChrX	stalkie_big_nohaplotig	exon	16513209	16513213	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5772 5776 -
ChrX	stalkie_big_nohaplotig	exon	16553628	16553630	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5769 5771 -
ChrX	stalkie_big_nohaplotig	exon	16556236	16556240	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5764 5768 -
ChrX	stalkie_big_nohaplotig	exon	16559285	16559289	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5759 5763 -
ChrX	stalkie_big_nohaplotig	exon	16561360	16561369	80	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5749 5758 -
ChrX	stalkie_big_nohaplotig	exon	16568708	16568719	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5737 5748 -
ChrX	stalkie_big_nohaplotig	exon	16570104	16570105	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5735 5736 -
ChrX	stalkie_big_nohaplotig	exon	16577417	16577426	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5725 5734 -
ChrX	stalkie_big_nohaplotig	exon	16581342	16581346	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5720 5724 -
ChrX	stalkie_big_nohaplotig	exon	16587006	16587009	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5716 5719 -
ChrX	stalkie_big_nohaplotig	exon	16592423	16592489	58	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5636 5715 -
ChrX	stalkie_big_nohaplotig	exon	16623563	16623575	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5584 5596 -
ChrX	stalkie_big_nohaplotig	exon	16630120	16630133	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5553 5566 -
ChrX	stalkie_big_nohaplotig	exon	16640303	16640306	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5549 5552 -
ChrX	stalkie_big_nohaplotig	exon	16647641	16647642	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5547 5548 -
ChrX	stalkie_big_nohaplotig	exon	16647653	16647660	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5488 5495 -
ChrX	stalkie_big_nohaplotig	exon	16678659	16678681	44	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5452 5487 -
ChrX	stalkie_big_nohaplotig	exon	16681214	16681222	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5443 5451 -
ChrX	stalkie_big_nohaplotig	exon	16682307	16682311	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5438 5442 -
ChrX	stalkie_big_nohaplotig	exon	16789967	16789977	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5187 5197 -
ChrX	stalkie_big_nohaplotig	exon	16817452	16817556	33	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5141 5186 -
ChrX	stalkie_big_nohaplotig	exon	16828366	16828379	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5117 5130 -
ChrX	stalkie_big_nohaplotig	exon	16838760	16838761	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 5115 5116 -
ChrX	stalkie_big_nohaplotig	exon	16845633	16845643	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 4744 4754 -
ChrX	stalkie_big_nohaplotig	exon	16856365	16856379	80	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 4729 4743 -
ChrX	stalkie_big_nohaplotig	exon	16859661	16859662	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 4727 4728 -
ChrX	stalkie_big_nohaplotig	exon	16869941	16869944	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 4723 4726 -
ChrX	stalkie_big_nohaplotig	exon	16874527	16874535	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 4714 4722 -
ChrX	stalkie_big_nohaplotig	exon	16879333	16879335	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 4711 4713 -
ChrX	stalkie_big_nohaplotig	exon	16881598	16881605	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 4703 4710 -
ChrX	stalkie_big_nohaplotig	exon	16881616	16881622	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 4640 4646 -
ChrX	stalkie_big_nohaplotig	exon	16882051	16882067	47	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 4632 4639 -
ChrX	stalkie_big_nohaplotig	exon	16882125	16882355	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 4401 4631 -
ChrX	stalkie_big_nohaplotig	exon	16900381	16900576	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 4205 4400 -
ChrX	stalkie_big_nohaplotig	exon	16901762	16902025	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 3941 4204 -
ChrX	stalkie_big_nohaplotig	exon	16908154	16908356	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 3738 3940 -
ChrX	stalkie_big_nohaplotig	exon	16912654	16912774	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 3617 3737 -
ChrX	stalkie_big_nohaplotig	exon	16912850	16912988	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 3478 3616 -
ChrX	stalkie_big_nohaplotig	exon	16913049	16913266	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 3260 3477 -
ChrX	stalkie_big_nohaplotig	exon	16913329	16913621	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 2967 3259 -
ChrX	stalkie_big_nohaplotig	exon	16914360	16914485	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 2841 2966 -
ChrX	stalkie_big_nohaplotig	exon	16914880	16915067	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 2653 2840 -
ChrX	stalkie_big_nohaplotig	exon	16916924	16917062	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 2514 2652 -
ChrX	stalkie_big_nohaplotig	exon	16918871	16918885	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 2499 2513 -
ChrX	stalkie_big_nohaplotig	exon	16920815	16920871	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 2442 2498 -
ChrX	stalkie_big_nohaplotig	exon	16922455	16922538	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 2358 2441 -
ChrX	stalkie_big_nohaplotig	exon	16922722	16922890	99	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 2188 2357 -
ChrX	stalkie_big_nohaplotig	exon	16924785	16924907	99	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 2065 2187 -
ChrX	stalkie_big_nohaplotig	exon	16934085	16934297	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 1852 2064 -
ChrX	stalkie_big_nohaplotig	exon	16937055	16937376	100	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 1530 1851 -
ChrX	stalkie_big_nohaplotig	exon	16951996	16953382	99	+	.	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 137 1529 -
ChrX	stalkie_big_nohaplotig	CDS	16882194	16882355	.	+	0	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 4401 4562 .
ChrX	stalkie_big_nohaplotig	CDS	16900381	16900576	.	+	0	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 4205 4400 .
ChrX	stalkie_big_nohaplotig	CDS	16901762	16902025	.	+	2	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 3941 4204 .
ChrX	stalkie_big_nohaplotig	CDS	16908154	16908356	.	+	2	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 3738 3940 .
ChrX	stalkie_big_nohaplotig	CDS	16912654	16912774	.	+	0	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 3617 3737 .
ChrX	stalkie_big_nohaplotig	CDS	16912850	16912988	.	+	2	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 3478 3616 .
ChrX	stalkie_big_nohaplotig	CDS	16913049	16913266	.	+	1	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 3260 3477 .
ChrX	stalkie_big_nohaplotig	CDS	16913329	16913621	.	+	2	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 2967 3259 .
ChrX	stalkie_big_nohaplotig	CDS	16914360	16914485	.	+	0	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 2841 2966 .
ChrX	stalkie_big_nohaplotig	CDS	16914880	16915067	.	+	0	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 2653 2840 .
ChrX	stalkie_big_nohaplotig	CDS	16916924	16917062	.	+	1	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 2514 2652 .
ChrX	stalkie_big_nohaplotig	CDS	16918871	16918885	.	+	0	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 2499 2513 .
ChrX	stalkie_big_nohaplotig	CDS	16920815	16920871	.	+	0	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 2442 2498 .
ChrX	stalkie_big_nohaplotig	CDS	16922455	16922538	.	+	0	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 2358 2441 .
ChrX	stalkie_big_nohaplotig	CDS	16922722	16922867	.	+	0	Parent=comp158628_c0_seq1.mrna1;Target=comp158628_c0_seq1 2211 2357 .
ChrX	stalkie_big_nohaplotig	mRNA	16480026	16882164	.	+	.	ID=FBgn0259176.1.mrna1;geneID=FBgn0259176.1.path1;Name=FBgn0259176.1;Dir=indeterminatecoverage=100.0;identity=95.3;matches=2173;mismatches=51;indels=56;unknowns=0;locus=RLOC_00000946
ChrX	stalkie_big_nohaplotig	exon	16480026	16481859	99	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 1839 1 .
ChrX	stalkie_big_nohaplotig	exon	16494201	16494207	100	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 1846 1840 .
ChrX	stalkie_big_nohaplotig	exon	16498972	16498985	78	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 1860 1847 .
ChrX	stalkie_big_nohaplotig	exon	16506145	16506150	100	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 1866 1861 .
ChrX	stalkie_big_nohaplotig	exon	16510136	16510140	80	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 1871 1867 .
ChrX	stalkie_big_nohaplotig	exon	16514505	16514508	100	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 1889 1886 .
ChrX	stalkie_big_nohaplotig	exon	16515444	16515457	85	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 1903 1890 .
ChrX	stalkie_big_nohaplotig	exon	16520466	16520476	100	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 1914 1904 .
ChrX	stalkie_big_nohaplotig	exon	16639526	16639537	100	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 1976 1965 .
ChrX	stalkie_big_nohaplotig	exon	16703497	16703503	100	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2029 2023 .
ChrX	stalkie_big_nohaplotig	exon	16706703	16706708	100	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2044 2039 .
ChrX	stalkie_big_nohaplotig	exon	16709451	16709457	100	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2051 2045 .
ChrX	stalkie_big_nohaplotig	exon	16712782	16712825	51	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2093 2052 .
ChrX	stalkie_big_nohaplotig	exon	16720758	16720760	100	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2096 2094 .
ChrX	stalkie_big_nohaplotig	exon	16724533	16724537	100	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2101 2097 .
ChrX	stalkie_big_nohaplotig	exon	16731962	16731967	100	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2107 2102 .
ChrX	stalkie_big_nohaplotig	exon	16739099	16739101	100	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2110 2108 .
ChrX	stalkie_big_nohaplotig	exon	16745830	16745833	100	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2114 2111 .
ChrX	stalkie_big_nohaplotig	exon	16793335	16793342	100	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2122 2115 .
ChrX	stalkie_big_nohaplotig	exon	16807491	16807495	80	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2413 2409 .
ChrX	stalkie_big_nohaplotig	exon	16817523	16817527	100	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2418 2414 .
ChrX	stalkie_big_nohaplotig	exon	16817533	16817563	77	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2473 2450 .
ChrX	stalkie_big_nohaplotig	exon	16826701	16826706	83	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2479 2474 .
ChrX	stalkie_big_nohaplotig	exon	16828369	16828379	100	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2490 2480 .
ChrX	stalkie_big_nohaplotig	exon	16830418	16830457	55	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2682 2630 .
ChrX	stalkie_big_nohaplotig	exon	16837249	16837256	100	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2690 2683 .
ChrX	stalkie_big_nohaplotig	exon	16852285	16852288	100	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2715 2712 .
ChrX	stalkie_big_nohaplotig	exon	16857540	16857550	100	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2726 2716 .
ChrX	stalkie_big_nohaplotig	exon	16858461	16858469	100	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2859 2851 .
ChrX	stalkie_big_nohaplotig	exon	16877084	16877127	55	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2920 2861 .
ChrX	stalkie_big_nohaplotig	exon	16881598	16881600	100	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2963 2961 .
ChrX	stalkie_big_nohaplotig	exon	16882047	16882061	40	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2969 2964 .
ChrX	stalkie_big_nohaplotig	exon	16882119	16882164	100	+	.	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 3015 2970 .
ChrX	stalkie_big_nohaplotig	CDS	16480026	16481859	.	+	0	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 1839 1 .
ChrX	stalkie_big_nohaplotig	CDS	16494201	16494207	.	+	2	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 1846 1840 .
ChrX	stalkie_big_nohaplotig	CDS	16498972	16498985	.	+	1	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 1860 1847 .
ChrX	stalkie_big_nohaplotig	CDS	16506145	16506150	.	+	2	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 1866 1861 .
ChrX	stalkie_big_nohaplotig	CDS	16510136	16510140	.	+	2	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 1871 1867 .
ChrX	stalkie_big_nohaplotig	CDS	16514505	16514508	.	+	0	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 1889 1886 .
ChrX	stalkie_big_nohaplotig	CDS	16515444	16515457	.	+	2	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 1903 1890 .
ChrX	stalkie_big_nohaplotig	CDS	16520466	16520476	.	+	0	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 1914 1904 .
ChrX	stalkie_big_nohaplotig	CDS	16639526	16639537	.	+	1	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 1976 1965 .
ChrX	stalkie_big_nohaplotig	CDS	16703497	16703503	.	+	1	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2029 2023 .
ChrX	stalkie_big_nohaplotig	CDS	16706703	16706708	.	+	0	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2044 2039 .
ChrX	stalkie_big_nohaplotig	CDS	16709451	16709457	.	+	0	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2051 2045 .
ChrX	stalkie_big_nohaplotig	CDS	16712782	16712825	.	+	2	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2093 2052 .
ChrX	stalkie_big_nohaplotig	CDS	16720758	16720760	.	+	0	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2096 2094 .
ChrX	stalkie_big_nohaplotig	CDS	16724533	16724537	.	+	0	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2101 2097 .
ChrX	stalkie_big_nohaplotig	CDS	16731962	16731967	.	+	1	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2107 2102 .
ChrX	stalkie_big_nohaplotig	CDS	16739099	16739101	.	+	1	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2110 2108 .
ChrX	stalkie_big_nohaplotig	CDS	16745830	16745833	.	+	1	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2114 2111 .
ChrX	stalkie_big_nohaplotig	CDS	16793335	16793342	.	+	0	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2122 2115 .
ChrX	stalkie_big_nohaplotig	CDS	16807491	16807495	.	+	1	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2413 2409 .
ChrX	stalkie_big_nohaplotig	CDS	16817523	16817527	.	+	2	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2418 2414 .
ChrX	stalkie_big_nohaplotig	CDS	16817533	16817563	.	+	0	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2473 2450 .
ChrX	stalkie_big_nohaplotig	CDS	16826701	16826706	.	+	2	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2479 2474 .
ChrX	stalkie_big_nohaplotig	CDS	16828369	16828379	.	+	2	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2490 2480 .
ChrX	stalkie_big_nohaplotig	CDS	16830418	16830457	.	+	0	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2682 2630 .
ChrX	stalkie_big_nohaplotig	CDS	16837249	16837256	.	+	2	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2690 2683 .
ChrX	stalkie_big_nohaplotig	CDS	16852285	16852288	.	+	0	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2715 2712 .
ChrX	stalkie_big_nohaplotig	CDS	16857540	16857550	.	+	2	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2726 2716 .
ChrX	stalkie_big_nohaplotig	CDS	16858461	16858469	.	+	0	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2859 2851 .
ChrX	stalkie_big_nohaplotig	CDS	16877084	16877127	.	+	0	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2920 2861 .
ChrX	stalkie_big_nohaplotig	CDS	16881598	16881600	.	+	1	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2963 2961 .
ChrX	stalkie_big_nohaplotig	CDS	16882047	16882061	.	+	1	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 2969 2964 .
ChrX	stalkie_big_nohaplotig	CDS	16882119	16882164	.	+	1	Parent=FBgn0259176.1.mrna1;Target=FBgn0259176.1 3015 2970 .
ChrX	stalkie_big_nohaplotig	mRNA	16560442	16561495	.	-	.	ID=comp156913_c0_seq1.mrna1;geneID=comp156913_c0_seq1.path1;Name=comp156913_c0_seq1;Dir=indeterminatecoverage=94.2;identity=97.5;matches=1037;mismatches=3;indels=24;unknowns=0;Target=comp156913_c0_seq1 1113 64 .;CDS_Target=comp156913_c0_seq1 534 478 .;locus=RLOC_00000946
ChrX	stalkie_big_nohaplotig	exon	16560442	16561495	97	-	.	Parent=comp156913_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16561029	16561085	.	-	0	Parent=comp156913_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16900381	16952581	.	+	.	ID=FBgn0040297.1.mrna1;geneID=FBgn0040297.1.path1;Name=FBgn0040297.1;Dir=sensecoverage=92.9;identity=99.7;matches=3332;mismatches=1;indels=8;unknowns=0;locus=RLOC_00000946
ChrX	stalkie_big_nohaplotig	exon	16900381	16900576	100	+	.	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 256 451 +
ChrX	stalkie_big_nohaplotig	exon	16901762	16902025	100	+	.	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 452 715 +
ChrX	stalkie_big_nohaplotig	exon	16908154	16908356	100	+	.	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 716 918 +
ChrX	stalkie_big_nohaplotig	exon	16912654	16912774	100	+	.	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 919 1039 +
ChrX	stalkie_big_nohaplotig	exon	16912850	16913004	94	+	.	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 1040 1186 +
ChrX	stalkie_big_nohaplotig	exon	16913057	16913266	100	+	.	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 1187 1396 +
ChrX	stalkie_big_nohaplotig	exon	16913329	16913621	100	+	.	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 1397 1689 +
ChrX	stalkie_big_nohaplotig	exon	16914360	16914485	100	+	.	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 1690 1815 +
ChrX	stalkie_big_nohaplotig	exon	16914880	16915067	100	+	.	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 1816 2003 +
ChrX	stalkie_big_nohaplotig	exon	16916924	16917062	100	+	.	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 2004 2142 +
ChrX	stalkie_big_nohaplotig	exon	16918871	16918885	100	+	.	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 2143 2157 +
ChrX	stalkie_big_nohaplotig	exon	16920815	16920871	100	+	.	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 2158 2214 +
ChrX	stalkie_big_nohaplotig	exon	16922455	16922538	100	+	.	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 2215 2298 +
ChrX	stalkie_big_nohaplotig	exon	16922722	16922800	100	+	.	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 2299 2377 +
ChrX	stalkie_big_nohaplotig	exon	16924818	16924907	98	+	.	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 2378 2467 +
ChrX	stalkie_big_nohaplotig	exon	16934085	16934297	100	+	.	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 2468 2680 +
ChrX	stalkie_big_nohaplotig	exon	16937055	16937376	100	+	.	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 2681 3002 +
ChrX	stalkie_big_nohaplotig	exon	16951996	16952581	100	+	.	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 3003 3588 +
ChrX	stalkie_big_nohaplotig	CDS	16913071	16913266	.	+	0	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 1201 1396 +
ChrX	stalkie_big_nohaplotig	CDS	16913329	16913621	.	+	2	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 1397 1689 +
ChrX	stalkie_big_nohaplotig	CDS	16914360	16914485	.	+	0	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 1690 1815 +
ChrX	stalkie_big_nohaplotig	CDS	16914880	16915067	.	+	0	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 1816 2003 +
ChrX	stalkie_big_nohaplotig	CDS	16916924	16917062	.	+	1	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 2004 2142 +
ChrX	stalkie_big_nohaplotig	CDS	16918871	16918885	.	+	0	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 2143 2157 +
ChrX	stalkie_big_nohaplotig	CDS	16920815	16920871	.	+	0	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 2158 2214 +
ChrX	stalkie_big_nohaplotig	CDS	16922455	16922538	.	+	0	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 2215 2298 +
ChrX	stalkie_big_nohaplotig	CDS	16922722	16922800	.	+	0	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 2299 2377 +
ChrX	stalkie_big_nohaplotig	CDS	16924818	16924907	.	+	2	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 2378 2467 +
ChrX	stalkie_big_nohaplotig	CDS	16934085	16934297	.	+	2	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 2468 2680 +
ChrX	stalkie_big_nohaplotig	CDS	16937055	16937376	.	+	2	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 2681 3002 +
ChrX	stalkie_big_nohaplotig	CDS	16951996	16952581	.	+	1	Parent=FBgn0040297.1.mrna1;Target=FBgn0040297.1 3003 3588 +
ChrX	gffcl	locus	16535851	16565041	.	-	.	ID=RLOC_00000947;geneIDs=comp150906_c0_seq1.path1;transcripts=comp150906_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16535851	16565041	.	-	.	ID=comp150906_c0_seq1.mrna1;geneID=comp150906_c0_seq1.path1;Name=comp150906_c0_seq1;Dir=indeterminatecoverage=69.7;identity=99.2;matches=584;mismatches=4;indels=1;unknowns=0;locus=RLOC_00000947
ChrX	stalkie_big_nohaplotig	exon	16535851	16535855	100	-	.	Parent=comp150906_c0_seq1.mrna1;Target=comp150906_c0_seq1 657 653 .
ChrX	stalkie_big_nohaplotig	exon	16541912	16541924	85	-	.	Parent=comp150906_c0_seq1.mrna1;Target=comp150906_c0_seq1 583 570 .
ChrX	stalkie_big_nohaplotig	exon	16548812	16548819	100	-	.	Parent=comp150906_c0_seq1.mrna1;Target=comp150906_c0_seq1 569 562 .
ChrX	stalkie_big_nohaplotig	exon	16549263	16549269	100	-	.	Parent=comp150906_c0_seq1.mrna1;Target=comp150906_c0_seq1 561 555 .
ChrX	stalkie_big_nohaplotig	exon	16550421	16550424	100	-	.	Parent=comp150906_c0_seq1.mrna1;Target=comp150906_c0_seq1 554 551 .
ChrX	stalkie_big_nohaplotig	exon	16554441	16554443	100	-	.	Parent=comp150906_c0_seq1.mrna1;Target=comp150906_c0_seq1 550 548 .
ChrX	stalkie_big_nohaplotig	exon	16559171	16559174	100	-	.	Parent=comp150906_c0_seq1.mrna1;Target=comp150906_c0_seq1 547 544 .
ChrX	stalkie_big_nohaplotig	exon	16564499	16565041	99	-	.	Parent=comp150906_c0_seq1.mrna1;Target=comp150906_c0_seq1 543 1 .
ChrX	gffcl	locus	16564033	16564398	.	-	.	ID=RLOC_00000948;geneIDs=comp68228_c0_seq1.path2;transcripts=comp68228_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	16564033	16564398	.	-	.	ID=comp68228_c0_seq1.mrna2;geneID=comp68228_c0_seq1.path2;Name=comp68228_c0_seq1;Dir=indeterminatecoverage=88.4;identity=100.0;matches=366;mismatches=0;indels=0;unknowns=0;Target=comp68228_c0_seq1 414 49 .;CDS_Target=comp68228_c0_seq1 174 49 .;locus=RLOC_00000948
ChrX	stalkie_big_nohaplotig	exon	16564033	16564398	100	-	.	Parent=comp68228_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	16564273	16564398	.	-	0	Parent=comp68228_c0_seq1.mrna2
ChrX	gffcl	locus	16617135	16617459	.	-	.	ID=RLOC_00000950;geneIDs=comp466836_c0_seq1.path1;transcripts=comp466836_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16617135	16617459	.	-	.	ID=comp466836_c0_seq1.mrna1;geneID=comp466836_c0_seq1.path1;Name=comp466836_c0_seq1;Dir=indeterminatecoverage=93.7;identity=100.0;matches=325;mismatches=0;indels=0;unknowns=0;Target=comp466836_c0_seq1 347 23 .;CDS_Target=comp466836_c0_seq1 106 23 .;locus=RLOC_00000950
ChrX	stalkie_big_nohaplotig	exon	16617135	16617459	100	-	.	Parent=comp466836_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16617376	16617459	.	-	0	Parent=comp466836_c0_seq1.mrna1
ChrX	gffcl	locus	16619530	16629041	.	-	.	ID=RLOC_00000951;geneIDs=FBgn0029945.1.path1;transcripts=FBgn0029945.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16619530	16629041	.	-	.	ID=FBgn0029945.1.mrna1;geneID=FBgn0029945.1.path1;Name=FBgn0029945.1;Dir=sensecoverage=100.0;identity=99.7;matches=1866;mismatches=6;indels=0;unknowns=0;locus=RLOC_00000951
ChrX	stalkie_big_nohaplotig	exon	16619530	16620947	99	-	.	Parent=FBgn0029945.1.mrna1;Target=FBgn0029945.1 455 1872 +
ChrX	stalkie_big_nohaplotig	exon	16621029	16621233	100	-	.	Parent=FBgn0029945.1.mrna1;Target=FBgn0029945.1 250 454 +
ChrX	stalkie_big_nohaplotig	exon	16621293	16621378	100	-	.	Parent=FBgn0029945.1.mrna1;Target=FBgn0029945.1 164 249 +
ChrX	stalkie_big_nohaplotig	exon	16622228	16622291	98	-	.	Parent=FBgn0029945.1.mrna1;Target=FBgn0029945.1 100 163 +
ChrX	stalkie_big_nohaplotig	exon	16628943	16629041	98	-	.	Parent=FBgn0029945.1.mrna1;Target=FBgn0029945.1 1 99 +
ChrX	stalkie_big_nohaplotig	CDS	16619530	16620947	.	-	2	Parent=FBgn0029945.1.mrna1;Target=FBgn0029945.1 455 1872 +
ChrX	stalkie_big_nohaplotig	CDS	16621029	16621233	.	-	0	Parent=FBgn0029945.1.mrna1;Target=FBgn0029945.1 250 454 +
ChrX	stalkie_big_nohaplotig	CDS	16621293	16621378	.	-	2	Parent=FBgn0029945.1.mrna1;Target=FBgn0029945.1 164 249 +
ChrX	stalkie_big_nohaplotig	CDS	16622228	16622291	.	-	0	Parent=FBgn0029945.1.mrna1;Target=FBgn0029945.1 100 163 +
ChrX	stalkie_big_nohaplotig	CDS	16628943	16629041	.	-	0	Parent=FBgn0029945.1.mrna1;Target=FBgn0029945.1 1 99 +
ChrX	gffcl	locus	16640958	16641499	.	+	.	ID=RLOC_00000952;geneIDs=comp658229_c0_seq1.path1;transcripts=comp658229_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16640958	16641499	.	+	.	ID=comp658229_c0_seq1.mrna1;geneID=comp658229_c0_seq1.path1;Name=comp658229_c0_seq1;Dir=indeterminatecoverage=96.8;identity=100.0;matches=542;mismatches=0;indels=0;unknowns=0;Target=comp658229_c0_seq1 560 19 .;CDS_Target=comp658229_c0_seq1 311 63 .;locus=RLOC_00000952
ChrX	stalkie_big_nohaplotig	exon	16640958	16641499	100	+	.	Parent=comp658229_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16641002	16641250	.	+	0	Parent=comp658229_c0_seq1.mrna1
ChrX	gffcl	locus	16648512	16649203	.	-	.	ID=RLOC_00000953;geneIDs=comp152892_c1_seq1.path1;transcripts=comp152892_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16648512	16649203	.	-	.	ID=comp152892_c1_seq1.mrna1;geneID=comp152892_c1_seq1.path1;Name=comp152892_c1_seq1;Dir=indeterminatecoverage=99.9;identity=99.6;matches=689;mismatches=3;indels=0;unknowns=0;Target=comp152892_c1_seq1 692 1 .;CDS_Target=comp152892_c1_seq1 597 427 .;locus=RLOC_00000953
ChrX	stalkie_big_nohaplotig	exon	16648512	16649203	99	-	.	Parent=comp152892_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16648607	16648777	.	-	0	Parent=comp152892_c1_seq1.mrna1
ChrX	gffcl	locus	16700890	16772348	.	-	.	ID=RLOC_00000954;geneIDs=FBgn0032435.1.path1,comp148184_c0_seq1.path1,comp158024_c1_seq1.path1;transcripts=comp158024_c1_seq1.mrna1,comp148184_c0_seq1.mrna1,FBgn0032435.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16700890	16772348	.	-	.	ID=comp158024_c1_seq1.mrna1;geneID=comp158024_c1_seq1.path1;Name=comp158024_c1_seq1;Dir=indeterminatecoverage=80.4;identity=96.5;matches=1175;mismatches=20;indels=23;unknowns=0;Target=comp158024_c1_seq1 158 15 .;locus=RLOC_00000954
ChrX	stalkie_big_nohaplotig	exon	16700890	16700899	100	-	.	Parent=comp158024_c1_seq1.mrna1;Target=comp158024_c1_seq1 1528 1519 .
ChrX	stalkie_big_nohaplotig	exon	16714304	16714315	100	-	.	Parent=comp158024_c1_seq1.mrna1;Target=comp158024_c1_seq1 1407 1396 .
ChrX	stalkie_big_nohaplotig	exon	16717942	16717944	100	-	.	Parent=comp158024_c1_seq1.mrna1;Target=comp158024_c1_seq1 1395 1393 .
ChrX	stalkie_big_nohaplotig	exon	16724775	16724780	100	-	.	Parent=comp158024_c1_seq1.mrna1;Target=comp158024_c1_seq1 1392 1387 .
ChrX	stalkie_big_nohaplotig	exon	16725017	16725021	100	-	.	Parent=comp158024_c1_seq1.mrna1;Target=comp158024_c1_seq1 1386 1382 .
ChrX	stalkie_big_nohaplotig	exon	16726607	16726618	91	-	.	Parent=comp158024_c1_seq1.mrna1;Target=comp158024_c1_seq1 1356 1345 .
ChrX	stalkie_big_nohaplotig	exon	16728182	16728183	100	-	.	Parent=comp158024_c1_seq1.mrna1;Target=comp158024_c1_seq1 1344 1343 .
ChrX	stalkie_big_nohaplotig	exon	16728546	16728565	80	-	.	Parent=comp158024_c1_seq1.mrna1;Target=comp158024_c1_seq1 1342 1323 .
ChrX	stalkie_big_nohaplotig	exon	16734948	16734962	93	-	.	Parent=comp158024_c1_seq1.mrna1;Target=comp158024_c1_seq1 1298 1284 .
ChrX	stalkie_big_nohaplotig	exon	16735906	16735917	83	-	.	Parent=comp158024_c1_seq1.mrna1;Target=comp158024_c1_seq1 1283 1272 .
ChrX	stalkie_big_nohaplotig	exon	16737650	16737653	100	-	.	Parent=comp158024_c1_seq1.mrna1;Target=comp158024_c1_seq1 1271 1268 .
ChrX	stalkie_big_nohaplotig	exon	16767155	16767160	100	-	.	Parent=comp158024_c1_seq1.mrna1;Target=comp158024_c1_seq1 1267 1262 .
ChrX	stalkie_big_nohaplotig	exon	16771265	16772348	96	-	.	Parent=comp158024_c1_seq1.mrna1;Target=comp158024_c1_seq1 1114 8 .
ChrX	stalkie_big_nohaplotig	CDS	16772203	16772346	.	-	0	Parent=comp158024_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16728544	16729263	.	-	.	ID=comp148184_c0_seq1.mrna1;geneID=comp148184_c0_seq1.path1;Name=comp148184_c0_seq1;Dir=indeterminatecoverage=49.7;identity=97.9;matches=712;mismatches=1;indels=14;unknowns=0;Target=comp148184_c0_seq1 1450 731 .;CDS_Target=comp148184_c0_seq1 1288 1163 .;locus=RLOC_00000954
ChrX	stalkie_big_nohaplotig	exon	16728544	16729263	97	-	.	Parent=comp148184_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16728706	16728831	.	-	0	Parent=comp148184_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16731861	16737663	.	-	.	ID=FBgn0032435.1.mrna1;geneID=FBgn0032435.1.path1;Name=FBgn0032435.1;Dir=sensecoverage=100.0;identity=99.9;matches=2490;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000954
ChrX	stalkie_big_nohaplotig	exon	16731861	16732615	99	-	.	Parent=FBgn0032435.1.mrna1;Target=FBgn0032435.1 1739 2493 +
ChrX	stalkie_big_nohaplotig	exon	16732673	16732961	100	-	.	Parent=FBgn0032435.1.mrna1;Target=FBgn0032435.1 1450 1738 +
ChrX	stalkie_big_nohaplotig	exon	16733054	16733306	100	-	.	Parent=FBgn0032435.1.mrna1;Target=FBgn0032435.1 1197 1449 +
ChrX	stalkie_big_nohaplotig	exon	16733364	16734122	100	-	.	Parent=FBgn0032435.1.mrna1;Target=FBgn0032435.1 438 1196 +
ChrX	stalkie_big_nohaplotig	exon	16734190	16734346	100	-	.	Parent=FBgn0032435.1.mrna1;Target=FBgn0032435.1 281 437 +
ChrX	stalkie_big_nohaplotig	exon	16737309	16737497	100	-	.	Parent=FBgn0032435.1.mrna1;Target=FBgn0032435.1 92 280 +
ChrX	stalkie_big_nohaplotig	exon	16737573	16737663	100	-	.	Parent=FBgn0032435.1.mrna1;Target=FBgn0032435.1 1 91 +
ChrX	stalkie_big_nohaplotig	CDS	16731861	16732615	.	-	2	Parent=FBgn0032435.1.mrna1;Target=FBgn0032435.1 1739 2493 +
ChrX	stalkie_big_nohaplotig	CDS	16732673	16732961	.	-	0	Parent=FBgn0032435.1.mrna1;Target=FBgn0032435.1 1450 1738 +
ChrX	stalkie_big_nohaplotig	CDS	16733054	16733306	.	-	1	Parent=FBgn0032435.1.mrna1;Target=FBgn0032435.1 1197 1449 +
ChrX	stalkie_big_nohaplotig	CDS	16733364	16734122	.	-	1	Parent=FBgn0032435.1.mrna1;Target=FBgn0032435.1 438 1196 +
ChrX	stalkie_big_nohaplotig	CDS	16734190	16734346	.	-	2	Parent=FBgn0032435.1.mrna1;Target=FBgn0032435.1 281 437 +
ChrX	stalkie_big_nohaplotig	CDS	16737309	16737497	.	-	2	Parent=FBgn0032435.1.mrna1;Target=FBgn0032435.1 92 280 +
ChrX	stalkie_big_nohaplotig	CDS	16737573	16737663	.	-	0	Parent=FBgn0032435.1.mrna1;Target=FBgn0032435.1 1 91 +
ChrX	gffcl	locus	16713776	16713873	.	-	.	ID=RLOC_00000955;geneIDs=comp140098_c0_seq1.path2;transcripts=comp140098_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	16713776	16713873	.	-	.	ID=comp140098_c0_seq1.mrna2;geneID=comp140098_c0_seq1.path2;Name=comp140098_c0_seq1;Dir=indeterminatecoverage=16.1;identity=100.0;matches=98;mismatches=0;indels=0;unknowns=0;Target=comp140098_c0_seq1 609 512 .;locus=RLOC_00000955
ChrX	stalkie_big_nohaplotig	exon	16713776	16713873	100	-	.	Parent=comp140098_c0_seq1.mrna2
ChrX	gffcl	locus	16725134	16726187	.	+	.	ID=RLOC_00000956;geneIDs=comp133425_c0_seq1.path1;transcripts=comp133425_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16725134	16726187	.	+	.	ID=comp133425_c0_seq1.mrna1;geneID=comp133425_c0_seq1.path1;Name=comp133425_c0_seq1;Dir=indeterminatecoverage=98.7;identity=99.6;matches=1050;mismatches=1;indels=3;unknowns=0;Target=comp133425_c0_seq1 1065 15 .;CDS_Target=comp133425_c0_seq1 131 15 .;locus=RLOC_00000956
ChrX	stalkie_big_nohaplotig	exon	16725134	16726187	99	+	.	Parent=comp133425_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16725134	16725250	.	+	0	Parent=comp133425_c0_seq1.mrna1
ChrX	gffcl	locus	16726803	16727434	.	-	.	ID=RLOC_00000957;geneIDs=comp146347_c0_seq1.path1;transcripts=comp146347_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16726803	16727434	.	-	.	ID=comp146347_c0_seq1.mrna1;geneID=comp146347_c0_seq1.path1;Name=comp146347_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=632;mismatches=0;indels=0;unknowns=0;Target=comp146347_c0_seq1 632 1 .;CDS_Target=comp146347_c0_seq1 499 374 .;locus=RLOC_00000957
ChrX	stalkie_big_nohaplotig	exon	16726803	16727434	100	-	.	Parent=comp146347_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16726936	16727061	.	-	0	Parent=comp146347_c0_seq1.mrna1
ChrX	gffcl	locus	16759729	16764167	.	+	.	ID=RLOC_00000958;geneIDs=FBgn0032433.1.path1;transcripts=FBgn0032433.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16759729	16764167	.	+	.	ID=FBgn0032433.1.mrna1;geneID=FBgn0032433.1.path1;Name=FBgn0032433.1;Dir=sensecoverage=100.0;identity=99.8;matches=2366;mismatches=4;indels=0;unknowns=0;locus=RLOC_00000958
ChrX	stalkie_big_nohaplotig	exon	16759729	16759954	100	+	.	Parent=FBgn0032433.1.mrna1;Target=FBgn0032433.1 1 226 +
ChrX	stalkie_big_nohaplotig	exon	16761540	16761784	100	+	.	Parent=FBgn0032433.1.mrna1;Target=FBgn0032433.1 227 471 +
ChrX	stalkie_big_nohaplotig	exon	16761883	16762135	100	+	.	Parent=FBgn0032433.1.mrna1;Target=FBgn0032433.1 472 724 +
ChrX	stalkie_big_nohaplotig	exon	16762190	16762507	100	+	.	Parent=FBgn0032433.1.mrna1;Target=FBgn0032433.1 725 1042 +
ChrX	stalkie_big_nohaplotig	exon	16762565	16762916	100	+	.	Parent=FBgn0032433.1.mrna1;Target=FBgn0032433.1 1043 1394 +
ChrX	stalkie_big_nohaplotig	exon	16762984	16763122	100	+	.	Parent=FBgn0032433.1.mrna1;Target=FBgn0032433.1 1395 1533 +
ChrX	stalkie_big_nohaplotig	exon	16763183	16763876	99	+	.	Parent=FBgn0032433.1.mrna1;Target=FBgn0032433.1 1534 2227 +
ChrX	stalkie_big_nohaplotig	exon	16764025	16764167	100	+	.	Parent=FBgn0032433.1.mrna1;Target=FBgn0032433.1 2228 2370 +
ChrX	stalkie_big_nohaplotig	CDS	16759729	16759954	.	+	0	Parent=FBgn0032433.1.mrna1;Target=FBgn0032433.1 1 226 +
ChrX	stalkie_big_nohaplotig	CDS	16761540	16761784	.	+	2	Parent=FBgn0032433.1.mrna1;Target=FBgn0032433.1 227 471 +
ChrX	stalkie_big_nohaplotig	CDS	16761883	16762135	.	+	0	Parent=FBgn0032433.1.mrna1;Target=FBgn0032433.1 472 724 +
ChrX	stalkie_big_nohaplotig	CDS	16762190	16762507	.	+	2	Parent=FBgn0032433.1.mrna1;Target=FBgn0032433.1 725 1042 +
ChrX	stalkie_big_nohaplotig	CDS	16762565	16762916	.	+	2	Parent=FBgn0032433.1.mrna1;Target=FBgn0032433.1 1043 1394 +
ChrX	stalkie_big_nohaplotig	CDS	16762984	16763122	.	+	1	Parent=FBgn0032433.1.mrna1;Target=FBgn0032433.1 1395 1533 +
ChrX	stalkie_big_nohaplotig	CDS	16763183	16763876	.	+	0	Parent=FBgn0032433.1.mrna1;Target=FBgn0032433.1 1534 2227 +
ChrX	stalkie_big_nohaplotig	CDS	16764025	16764167	.	+	2	Parent=FBgn0032433.1.mrna1;Target=FBgn0032433.1 2228 2370 +
ChrX	gffcl	locus	16767826	16770644	.	.	.	ID=RLOC_00000959;geneIDs=comp144864_c0_seq1.path1,comp159976_c0_seq1.path1;transcripts=comp159976_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16767826	16769853	.	-	.	ID=comp159976_c0_seq1.mrna1;geneID=comp159976_c0_seq1.path1;Name=comp159976_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=2016;mismatches=12;indels=7;unknowns=0;Target=comp159976_c0_seq1 2035 1 .;CDS_Target=comp159976_c0_seq1 351 223 .;locus=RLOC_00000959
ChrX	stalkie_big_nohaplotig	exon	16767826	16769853	99	-	.	Parent=comp159976_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16769503	16769631	.	-	0	Parent=comp159976_c0_seq1.mrna1
ChrX	gffcl	locus	16772372	16791533	.	+	.	ID=RLOC_00000960;geneIDs=comp150727_c0_seq1.path1;transcripts=comp150727_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16772372	16791533	.	+	.	ID=comp150727_c0_seq1.mrna1;geneID=comp150727_c0_seq1.path1;Name=comp150727_c0_seq1;Dir=indeterminatecoverage=85.4;identity=96.1;matches=1032;mismatches=12;indels=30;unknowns=0;Target=comp150727_c0_seq1 352 233 .;locus=RLOC_00000960
ChrX	stalkie_big_nohaplotig	exon	16772372	16773324	100	+	.	Parent=comp150727_c0_seq1.mrna1;Target=comp150727_c0_seq1 953 1 .
ChrX	stalkie_big_nohaplotig	exon	16773392	16773413	63	+	.	Parent=comp150727_c0_seq1.mrna1;Target=comp150727_c0_seq1 970 954 .
ChrX	stalkie_big_nohaplotig	exon	16776247	16776255	100	+	.	Parent=comp150727_c0_seq1.mrna1;Target=comp150727_c0_seq1 979 971 .
ChrX	stalkie_big_nohaplotig	exon	16777117	16777122	100	+	.	Parent=comp150727_c0_seq1.mrna1;Target=comp150727_c0_seq1 985 980 .
ChrX	stalkie_big_nohaplotig	exon	16782472	16782509	52	+	.	Parent=comp150727_c0_seq1.mrna1;Target=comp150727_c0_seq1 1026 986 .
ChrX	stalkie_big_nohaplotig	exon	16787577	16787610	64	+	.	Parent=comp150727_c0_seq1.mrna1;Target=comp150727_c0_seq1 1048 1027 .
ChrX	stalkie_big_nohaplotig	exon	16791530	16791533	100	+	.	Parent=comp150727_c0_seq1.mrna1;Target=comp150727_c0_seq1 1052 1049 .
ChrX	stalkie_big_nohaplotig	CDS	16772604	16772723	.	+	0	Parent=comp150727_c0_seq1.mrna1
ChrX	gffcl	locus	16773436	16773786	.	-	.	ID=RLOC_00000961;geneIDs=comp88772_c0_seq1.path1;transcripts=comp88772_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16773436	16773786	.	-	.	ID=comp88772_c0_seq1.mrna1;geneID=comp88772_c0_seq1.path1;Name=comp88772_c0_seq1;Dir=indeterminatecoverage=98.6;identity=100.0;matches=351;mismatches=0;indels=0;unknowns=0;Target=comp88772_c0_seq1 356 6 .;CDS_Target=comp88772_c0_seq1 81 7 .;locus=RLOC_00000961
ChrX	stalkie_big_nohaplotig	exon	16773436	16773786	100	-	.	Parent=comp88772_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16773711	16773785	.	-	0	Parent=comp88772_c0_seq1.mrna1
ChrX	gffcl	locus	16774753	16785281	.	-	.	ID=RLOC_00000962;geneIDs=FBgn0020443.1.path1;transcripts=FBgn0020443.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16774753	16785281	.	-	.	ID=FBgn0020443.1.mrna1;geneID=FBgn0020443.1.path1;Name=FBgn0020443.1;Dir=sensecoverage=100.0;identity=99.8;matches=1831;mismatches=2;indels=1;unknowns=0;Target=FBgn0020443.1 2 61 +;locus=RLOC_00000962
ChrX	stalkie_big_nohaplotig	exon	16774753	16774793	100	-	.	Parent=FBgn0020443.1.mrna1;Target=FBgn0020443.1 1793 1833 +
ChrX	stalkie_big_nohaplotig	exon	16774864	16775032	100	-	.	Parent=FBgn0020443.1.mrna1;Target=FBgn0020443.1 1624 1792 +
ChrX	stalkie_big_nohaplotig	exon	16777937	16778113	100	-	.	Parent=FBgn0020443.1.mrna1;Target=FBgn0020443.1 1447 1623 +
ChrX	stalkie_big_nohaplotig	exon	16778173	16778259	100	-	.	Parent=FBgn0020443.1.mrna1;Target=FBgn0020443.1 1360 1446 +
ChrX	stalkie_big_nohaplotig	exon	16778326	16779095	99	-	.	Parent=FBgn0020443.1.mrna1;Target=FBgn0020443.1 590 1359 +
ChrX	stalkie_big_nohaplotig	exon	16779181	16779369	100	-	.	Parent=FBgn0020443.1.mrna1;Target=FBgn0020443.1 401 589 +
ChrX	stalkie_big_nohaplotig	exon	16784881	16785281	99	-	.	Parent=FBgn0020443.1.mrna1;Target=FBgn0020443.1 1 400 +
ChrX	stalkie_big_nohaplotig	CDS	16785220	16785280	.	-	0	Parent=FBgn0020443.1.mrna1
ChrX	gffcl	locus	16783835	16784476	.	+	.	ID=RLOC_00000963;geneIDs=comp115030_c0_seq1.path1;transcripts=comp115030_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16783835	16784476	.	+	.	ID=comp115030_c0_seq1.mrna1;geneID=comp115030_c0_seq1.path1;Name=comp115030_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=641;mismatches=1;indels=0;unknowns=0;Target=comp115030_c0_seq1 642 1 .;CDS_Target=comp115030_c0_seq1 443 276 .;locus=RLOC_00000963
ChrX	stalkie_big_nohaplotig	exon	16783835	16784476	99	+	.	Parent=comp115030_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16784110	16784277	.	+	0	Parent=comp115030_c0_seq1.mrna1
ChrX	gffcl	locus	16792333	16796854	.	+	.	ID=RLOC_00000964;geneIDs=FBgn0040286.1.path1;transcripts=FBgn0040286.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16792333	16796854	.	+	.	ID=FBgn0040286.1.mrna1;geneID=FBgn0040286.1.path1;Name=FBgn0040286.1;Dir=sensecoverage=100.0;identity=99.8;matches=614;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000964
ChrX	stalkie_big_nohaplotig	exon	16792333	16792431	98	+	.	Parent=FBgn0040286.1.mrna1;Target=FBgn0040286.1 1 99 +
ChrX	stalkie_big_nohaplotig	exon	16792563	16792693	100	+	.	Parent=FBgn0040286.1.mrna1;Target=FBgn0040286.1 100 230 +
ChrX	stalkie_big_nohaplotig	exon	16796470	16796854	100	+	.	Parent=FBgn0040286.1.mrna1;Target=FBgn0040286.1 231 615 +
ChrX	stalkie_big_nohaplotig	CDS	16792333	16792431	.	+	0	Parent=FBgn0040286.1.mrna1;Target=FBgn0040286.1 1 99 +
ChrX	stalkie_big_nohaplotig	CDS	16792563	16792693	.	+	0	Parent=FBgn0040286.1.mrna1;Target=FBgn0040286.1 100 230 +
ChrX	stalkie_big_nohaplotig	CDS	16796470	16796854	.	+	1	Parent=FBgn0040286.1.mrna1;Target=FBgn0040286.1 231 615 +
ChrX	gffcl	locus	16797301	17736693	.	+	.	ID=RLOC_00000965;geneIDs=comp134975_c0_seq1.path1;transcripts=comp134975_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16797301	17736693	.	+	.	ID=comp134975_c0_seq1.mrna1;geneID=comp134975_c0_seq1.path1;Name=comp134975_c0_seq1;Dir=indeterminatecoverage=90.5;identity=99.8;matches=826;mismatches=0;indels=2;unknowns=0;locus=RLOC_00000965
ChrX	stalkie_big_nohaplotig	exon	16797301	16798079	99	+	.	Parent=comp134975_c0_seq1.mrna1;Target=comp134975_c0_seq1 813 33 .
ChrX	stalkie_big_nohaplotig	exon	17695565	17695566	100	+	.	Parent=comp134975_c0_seq1.mrna1;Target=comp134975_c0_seq1 816 815 .
ChrX	stalkie_big_nohaplotig	exon	17698818	17698823	100	+	.	Parent=comp134975_c0_seq1.mrna1;Target=comp134975_c0_seq1 822 817 .
ChrX	stalkie_big_nohaplotig	exon	17714000	17714002	100	+	.	Parent=comp134975_c0_seq1.mrna1;Target=comp134975_c0_seq1 825 823 .
ChrX	stalkie_big_nohaplotig	exon	17719356	17719357	100	+	.	Parent=comp134975_c0_seq1.mrna1;Target=comp134975_c0_seq1 827 826 .
ChrX	stalkie_big_nohaplotig	exon	17726354	17726358	100	+	.	Parent=comp134975_c0_seq1.mrna1;Target=comp134975_c0_seq1 832 828 .
ChrX	stalkie_big_nohaplotig	exon	17726903	17726906	100	+	.	Parent=comp134975_c0_seq1.mrna1;Target=comp134975_c0_seq1 836 833 .
ChrX	stalkie_big_nohaplotig	exon	17728756	17728759	100	+	.	Parent=comp134975_c0_seq1.mrna1;Target=comp134975_c0_seq1 840 837 .
ChrX	stalkie_big_nohaplotig	exon	17736373	17736380	100	+	.	Parent=comp134975_c0_seq1.mrna1;Target=comp134975_c0_seq1 848 841 .
ChrX	stalkie_big_nohaplotig	exon	17736554	17736558	100	+	.	Parent=comp134975_c0_seq1.mrna1;Target=comp134975_c0_seq1 853 849 .
ChrX	stalkie_big_nohaplotig	exon	17736686	17736693	100	+	.	Parent=comp134975_c0_seq1.mrna1;Target=comp134975_c0_seq1 861 854 .
ChrX	stalkie_big_nohaplotig	CDS	16798037	16798079	.	+	0	Parent=comp134975_c0_seq1.mrna1;Target=comp134975_c0_seq1 813 771 .
ChrX	stalkie_big_nohaplotig	CDS	17695565	17695566	.	+	2	Parent=comp134975_c0_seq1.mrna1;Target=comp134975_c0_seq1 816 815 .
ChrX	stalkie_big_nohaplotig	CDS	17698818	17698823	.	+	0	Parent=comp134975_c0_seq1.mrna1;Target=comp134975_c0_seq1 822 817 .
ChrX	stalkie_big_nohaplotig	CDS	17714000	17714002	.	+	0	Parent=comp134975_c0_seq1.mrna1;Target=comp134975_c0_seq1 825 823 .
ChrX	stalkie_big_nohaplotig	CDS	17719356	17719357	.	+	0	Parent=comp134975_c0_seq1.mrna1;Target=comp134975_c0_seq1 827 826 .
ChrX	stalkie_big_nohaplotig	CDS	17726354	17726358	.	+	1	Parent=comp134975_c0_seq1.mrna1;Target=comp134975_c0_seq1 832 828 .
ChrX	stalkie_big_nohaplotig	CDS	17726903	17726906	.	+	2	Parent=comp134975_c0_seq1.mrna1;Target=comp134975_c0_seq1 836 833 .
ChrX	stalkie_big_nohaplotig	CDS	17728756	17728759	.	+	1	Parent=comp134975_c0_seq1.mrna1;Target=comp134975_c0_seq1 840 837 .
ChrX	stalkie_big_nohaplotig	CDS	17736373	17736380	.	+	0	Parent=comp134975_c0_seq1.mrna1;Target=comp134975_c0_seq1 848 841 .
ChrX	stalkie_big_nohaplotig	CDS	17736554	17736558	.	+	1	Parent=comp134975_c0_seq1.mrna1;Target=comp134975_c0_seq1 853 849 .
ChrX	stalkie_big_nohaplotig	CDS	17736686	17736692	.	+	2	Parent=comp134975_c0_seq1.mrna1;Target=comp134975_c0_seq1 860 854 .
ChrX	gffcl	locus	16798782	16800346	.	+	.	ID=RLOC_00000966;geneIDs=comp146709_c0_seq1.path1;transcripts=comp146709_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16798782	16800346	.	+	.	ID=comp146709_c0_seq1.mrna1;geneID=comp146709_c0_seq1.path1;Name=comp146709_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.7;matches=1563;mismatches=1;indels=3;unknowns=0;Target=comp146709_c0_seq1 1581 16 .;CDS_Target=comp146709_c0_seq1 895 761 .;locus=RLOC_00000966
ChrX	stalkie_big_nohaplotig	exon	16798782	16800346	99	+	.	Parent=comp146709_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16799525	16799659	.	+	0	Parent=comp146709_c0_seq1.mrna1
ChrX	gffcl	locus	16803808	16807041	.	.	.	ID=RLOC_00000967;geneIDs=FBgn0032430.1.path1,comp152186_c0_seq1.path1;transcripts=FBgn0032430.1.mrna1,comp152186_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16803808	16807041	.	-	.	ID=FBgn0032430.1.mrna1;geneID=FBgn0032430.1.path1;Name=FBgn0032430.1;Dir=sensecoverage=100.0;identity=99.7;matches=1722;mismatches=6;indels=0;unknowns=0;locus=RLOC_00000967
ChrX	stalkie_big_nohaplotig	exon	16803808	16803949	100	-	.	Parent=FBgn0032430.1.mrna1;Target=FBgn0032430.1 1587 1728 +
ChrX	stalkie_big_nohaplotig	exon	16804021	16804553	100	-	.	Parent=FBgn0032430.1.mrna1;Target=FBgn0032430.1 1054 1586 +
ChrX	stalkie_big_nohaplotig	exon	16805835	16806003	98	-	.	Parent=FBgn0032430.1.mrna1;Target=FBgn0032430.1 885 1053 +
ChrX	stalkie_big_nohaplotig	exon	16806061	16806438	99	-	.	Parent=FBgn0032430.1.mrna1;Target=FBgn0032430.1 507 884 +
ChrX	stalkie_big_nohaplotig	exon	16806536	16807041	99	-	.	Parent=FBgn0032430.1.mrna1;Target=FBgn0032430.1 1 506 +
ChrX	stalkie_big_nohaplotig	CDS	16803808	16803949	.	-	1	Parent=FBgn0032430.1.mrna1;Target=FBgn0032430.1 1587 1728 +
ChrX	stalkie_big_nohaplotig	CDS	16804021	16804553	.	-	0	Parent=FBgn0032430.1.mrna1;Target=FBgn0032430.1 1054 1586 +
ChrX	stalkie_big_nohaplotig	CDS	16805835	16806003	.	-	1	Parent=FBgn0032430.1.mrna1;Target=FBgn0032430.1 885 1053 +
ChrX	stalkie_big_nohaplotig	CDS	16806061	16806438	.	-	1	Parent=FBgn0032430.1.mrna1;Target=FBgn0032430.1 507 884 +
ChrX	stalkie_big_nohaplotig	CDS	16806536	16807041	.	-	0	Parent=FBgn0032430.1.mrna1;Target=FBgn0032430.1 1 506 +
ChrX	stalkie_big_nohaplotig	mRNA	16804531	16805135	.	+	.	ID=comp152186_c0_seq1.mrna1;geneID=comp152186_c0_seq1.path1;Name=comp152186_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=601;mismatches=4;indels=0;unknowns=0;Target=comp152186_c0_seq1 605 1 .;CDS_Target=comp152186_c0_seq1 427 305 .;locus=RLOC_00000967
ChrX	stalkie_big_nohaplotig	exon	16804531	16805135	99	+	.	Parent=comp152186_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16804835	16804957	.	+	0	Parent=comp152186_c0_seq1.mrna1
ChrX	gffcl	locus	16807308	16808755	.	+	.	ID=RLOC_00000968;geneIDs=FBgn0032261.1.path1;transcripts=FBgn0032261.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16807308	16808755	.	+	.	ID=FBgn0032261.1.mrna1;geneID=FBgn0032261.1.path1;Name=FBgn0032261.1;Dir=sensecoverage=100.0;identity=100.0;matches=615;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000968
ChrX	stalkie_big_nohaplotig	exon	16807308	16807478	100	+	.	Parent=FBgn0032261.1.mrna1;Target=FBgn0032261.1 1 171 +
ChrX	stalkie_big_nohaplotig	exon	16807530	16807712	100	+	.	Parent=FBgn0032261.1.mrna1;Target=FBgn0032261.1 172 354 +
ChrX	stalkie_big_nohaplotig	exon	16807780	16807949	100	+	.	Parent=FBgn0032261.1.mrna1;Target=FBgn0032261.1 355 524 +
ChrX	stalkie_big_nohaplotig	exon	16808665	16808755	100	+	.	Parent=FBgn0032261.1.mrna1;Target=FBgn0032261.1 525 615 +
ChrX	stalkie_big_nohaplotig	CDS	16807308	16807478	.	+	0	Parent=FBgn0032261.1.mrna1;Target=FBgn0032261.1 1 171 +
ChrX	stalkie_big_nohaplotig	CDS	16807530	16807712	.	+	0	Parent=FBgn0032261.1.mrna1;Target=FBgn0032261.1 172 354 +
ChrX	stalkie_big_nohaplotig	CDS	16807780	16807949	.	+	0	Parent=FBgn0032261.1.mrna1;Target=FBgn0032261.1 355 524 +
ChrX	stalkie_big_nohaplotig	CDS	16808665	16808755	.	+	1	Parent=FBgn0032261.1.mrna1;Target=FBgn0032261.1 525 615 +
ChrX	stalkie_big_nohaplotig	mRNA	16808773	16995703	.	-	.	ID=comp153768_c0_seq1.mrna1;geneID=comp153768_c0_seq1.path1;Name=comp153768_c0_seq1;Dir=antisensecoverage=71.9;identity=94.0;matches=955;mismatches=35;indels=26;unknowns=0;Target=comp153768_c0_seq1 1429 1527 .;locus=RLOC_00000969
ChrX	stalkie_big_nohaplotig	exon	16808773	16808776	100	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 430 433 -
ChrX	stalkie_big_nohaplotig	exon	16813062	16813068	100	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 434 440 -
ChrX	stalkie_big_nohaplotig	exon	16826508	16826512	100	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 441 445 -
ChrX	stalkie_big_nohaplotig	exon	16833971	16833980	90	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 446 454 -
ChrX	stalkie_big_nohaplotig	exon	16840483	16840488	100	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 455 460 -
ChrX	stalkie_big_nohaplotig	exon	16873293	16873303	90	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 461 471 -
ChrX	stalkie_big_nohaplotig	exon	16873305	16873312	100	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 517 524 -
ChrX	stalkie_big_nohaplotig	exon	16882396	16882402	26	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 525 539 -
ChrX	stalkie_big_nohaplotig	exon	16884887	16884894	100	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 540 547 -
ChrX	stalkie_big_nohaplotig	exon	16890033	16890054	75	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 548 571 -
ChrX	stalkie_big_nohaplotig	exon	16912958	16912963	100	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 572 577 -
ChrX	stalkie_big_nohaplotig	exon	16915147	16915151	100	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 578 582 -
ChrX	stalkie_big_nohaplotig	exon	16915160	16915165	100	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 634 639 -
ChrX	stalkie_big_nohaplotig	exon	16922968	16922974	85	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 640 646 -
ChrX	stalkie_big_nohaplotig	exon	16924093	16924094	100	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 647 648 -
ChrX	stalkie_big_nohaplotig	exon	16925003	16925007	100	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 649 653 -
ChrX	stalkie_big_nohaplotig	exon	16938970	16938972	100	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 654 656 -
ChrX	stalkie_big_nohaplotig	exon	16946664	16946665	100	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 657 658 -
ChrX	stalkie_big_nohaplotig	exon	16949545	16949553	100	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 659 667 -
ChrX	stalkie_big_nohaplotig	exon	16951777	16951778	100	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 668 669 -
ChrX	stalkie_big_nohaplotig	exon	16955716	16955728	100	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 670 682 -
ChrX	stalkie_big_nohaplotig	exon	16956562	16956629	47	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 683 743 -
ChrX	stalkie_big_nohaplotig	exon	16964807	16964811	100	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 744 748 -
ChrX	stalkie_big_nohaplotig	exon	16978523	16978527	100	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 749 753 -
ChrX	stalkie_big_nohaplotig	exon	16994928	16995703	99	-	.	Parent=comp153768_c0_seq1.mrna1;Target=comp153768_c0_seq1 754 1529 -
ChrX	stalkie_big_nohaplotig	CDS	16995603	16995701	.	-	0	Parent=comp153768_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16810121	16813664	.	-	.	ID=FBgn0032262.1.mrna1;geneID=FBgn0032262.1.path1;Name=FBgn0032262.1;Dir=sensecoverage=100.0;identity=99.8;matches=1953;mismatches=3;indels=0;unknowns=0;locus=RLOC_00000969
ChrX	stalkie_big_nohaplotig	exon	16810121	16810307	100	-	.	Parent=FBgn0032262.1.mrna1;Target=FBgn0032262.1 1770 1956 +
ChrX	stalkie_big_nohaplotig	exon	16810932	16811425	100	-	.	Parent=FBgn0032262.1.mrna1;Target=FBgn0032262.1 1276 1769 +
ChrX	stalkie_big_nohaplotig	exon	16811491	16811899	100	-	.	Parent=FBgn0032262.1.mrna1;Target=FBgn0032262.1 867 1275 +
ChrX	stalkie_big_nohaplotig	exon	16812594	16812737	100	-	.	Parent=FBgn0032262.1.mrna1;Target=FBgn0032262.1 723 866 +
ChrX	stalkie_big_nohaplotig	exon	16812800	16812963	100	-	.	Parent=FBgn0032262.1.mrna1;Target=FBgn0032262.1 559 722 +
ChrX	stalkie_big_nohaplotig	exon	16813022	16813213	100	-	.	Parent=FBgn0032262.1.mrna1;Target=FBgn0032262.1 367 558 +
ChrX	stalkie_big_nohaplotig	exon	16813299	16813664	99	-	.	Parent=FBgn0032262.1.mrna1;Target=FBgn0032262.1 1 366 +
ChrX	stalkie_big_nohaplotig	CDS	16810121	16810307	.	-	1	Parent=FBgn0032262.1.mrna1;Target=FBgn0032262.1 1770 1956 +
ChrX	stalkie_big_nohaplotig	CDS	16810932	16811425	.	-	0	Parent=FBgn0032262.1.mrna1;Target=FBgn0032262.1 1276 1769 +
ChrX	stalkie_big_nohaplotig	CDS	16811491	16811899	.	-	1	Parent=FBgn0032262.1.mrna1;Target=FBgn0032262.1 867 1275 +
ChrX	stalkie_big_nohaplotig	CDS	16812594	16812737	.	-	1	Parent=FBgn0032262.1.mrna1;Target=FBgn0032262.1 723 866 +
ChrX	stalkie_big_nohaplotig	CDS	16812800	16812963	.	-	0	Parent=FBgn0032262.1.mrna1;Target=FBgn0032262.1 559 722 +
ChrX	stalkie_big_nohaplotig	CDS	16813022	16813213	.	-	0	Parent=FBgn0032262.1.mrna1;Target=FBgn0032262.1 367 558 +
ChrX	stalkie_big_nohaplotig	CDS	16813299	16813664	.	-	0	Parent=FBgn0032262.1.mrna1;Target=FBgn0032262.1 1 366 +
ChrX	stalkie_big_nohaplotig	mRNA	16954323	16956250	.	-	.	ID=comp152900_c0_seq1.mrna1;geneID=comp152900_c0_seq1.path1;Name=comp152900_c0_seq1;Dir=indeterminatecoverage=96.8;identity=99.1;matches=1923;mismatches=5;indels=12;unknowns=0;Target=comp152900_c0_seq1 1940 1 .;CDS_Target=comp152900_c0_seq1 1399 1280 .;locus=RLOC_00000969
ChrX	stalkie_big_nohaplotig	exon	16954323	16956250	99	-	.	Parent=comp152900_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16954863	16954982	.	-	0	Parent=comp152900_c0_seq1.mrna1
ChrX	gffcl	locus	16814151	16907035	.	-	.	ID=RLOC_00000970;geneIDs=comp155486_c2_seq1.path1;transcripts=comp155486_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16814151	16907035	.	-	.	ID=comp155486_c2_seq1.mrna1;geneID=comp155486_c2_seq1.path1;Name=comp155486_c2_seq1;Dir=antisensecoverage=81.8;identity=73.2;matches=388;mismatches=70;indels=72;unknowns=0;Target=comp155486_c2_seq1 510 548 .;locus=RLOC_00000970
ChrX	stalkie_big_nohaplotig	exon	16814151	16814220	88	-	.	Parent=comp155486_c2_seq1.mrna1;Target=comp155486_c2_seq1 1 70 -
ChrX	stalkie_big_nohaplotig	exon	16815915	16815924	80	-	.	Parent=comp155486_c2_seq1.mrna1;Target=comp155486_c2_seq1 71 80 -
ChrX	stalkie_big_nohaplotig	exon	16816219	16816220	100	-	.	Parent=comp155486_c2_seq1.mrna1;Target=comp155486_c2_seq1 81 82 -
ChrX	stalkie_big_nohaplotig	exon	16821403	16821405	100	-	.	Parent=comp155486_c2_seq1.mrna1;Target=comp155486_c2_seq1 83 85 -
ChrX	stalkie_big_nohaplotig	exon	16845288	16845305	88	-	.	Parent=comp155486_c2_seq1.mrna1;Target=comp155486_c2_seq1 86 103 -
ChrX	stalkie_big_nohaplotig	exon	16853380	16853393	78	-	.	Parent=comp155486_c2_seq1.mrna1;Target=comp155486_c2_seq1 104 116 -
ChrX	stalkie_big_nohaplotig	exon	16855627	16855662	40	-	.	Parent=comp155486_c2_seq1.mrna1;Target=comp155486_c2_seq1 117 191 -
ChrX	stalkie_big_nohaplotig	exon	16856199	16856203	100	-	.	Parent=comp155486_c2_seq1.mrna1;Target=comp155486_c2_seq1 192 196 -
ChrX	stalkie_big_nohaplotig	exon	16899755	16899758	25	-	.	Parent=comp155486_c2_seq1.mrna1;Target=comp155486_c2_seq1 197 200 -
ChrX	stalkie_big_nohaplotig	exon	16900787	16900793	100	-	.	Parent=comp155486_c2_seq1.mrna1;Target=comp155486_c2_seq1 201 207 -
ChrX	stalkie_big_nohaplotig	exon	16906651	16906662	100	-	.	Parent=comp155486_c2_seq1.mrna1;Target=comp155486_c2_seq1 208 219 -
ChrX	stalkie_big_nohaplotig	exon	16906728	16907035	74	-	.	Parent=comp155486_c2_seq1.mrna1;Target=comp155486_c2_seq1 270 549 -
ChrX	stalkie_big_nohaplotig	CDS	16906996	16907034	.	-	0	Parent=comp155486_c2_seq1.mrna1
ChrX	gffcl	locus	16944082	16946606	.	+	.	ID=RLOC_00000971;geneIDs=comp148288_c0_seq1.path1,comp567190_c0_seq1.path1;transcripts=comp148288_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16944680	16946606	.	+	.	ID=comp148288_c0_seq1.mrna1;geneID=comp148288_c0_seq1.path1;Name=comp148288_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1926;mismatches=1;indels=1;unknowns=0;Target=comp148288_c0_seq1 1928 1 .;CDS_Target=comp148288_c0_seq1 816 640 .;locus=RLOC_00000971
ChrX	stalkie_big_nohaplotig	exon	16944680	16946606	99	+	.	Parent=comp148288_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16945319	16945495	.	+	0	Parent=comp148288_c0_seq1.mrna1
ChrX	gffcl	locus	16948679	16949500	.	-	.	ID=RLOC_00000972;geneIDs=comp143480_c0_seq1.path1;transcripts=comp143480_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16948679	16949500	.	-	.	ID=comp143480_c0_seq1.mrna1;geneID=comp143480_c0_seq1.path1;Name=comp143480_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=821;mismatches=1;indels=1;unknowns=0;Target=comp143480_c0_seq1 823 1 .;CDS_Target=comp143480_c0_seq1 112 44 .;locus=RLOC_00000972
ChrX	stalkie_big_nohaplotig	exon	16948679	16949500	99	-	.	Parent=comp143480_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16949389	16949457	.	-	0	Parent=comp143480_c0_seq1.mrna1
ChrX	gffcl	locus	16949723	16951320	.	-	.	ID=RLOC_00000973;geneIDs=comp154253_c0_seq1.path1;transcripts=comp154253_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16949723	16951320	.	-	.	ID=comp154253_c0_seq1.mrna1;geneID=comp154253_c0_seq1.path1;Name=comp154253_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1596;mismatches=2;indels=2;unknowns=0;Target=comp154253_c0_seq1 1600 1 .;CDS_Target=comp154253_c0_seq1 136 2 .;locus=RLOC_00000973
ChrX	stalkie_big_nohaplotig	exon	16949723	16951320	99	-	.	Parent=comp154253_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16951185	16951319	.	-	0	Parent=comp154253_c0_seq1.mrna1
ChrX	gffcl	locus	16969229	16969914	.	+	.	ID=RLOC_00000975;geneIDs=FBgn0034455.1.path1;transcripts=FBgn0034455.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16969229	16969914	.	+	.	ID=FBgn0034455.1.mrna1;geneID=FBgn0034455.1.path1;Name=FBgn0034455.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=685;mismatches=1;indels=1;unknowns=0;Target=FBgn0034455.1 687 1 .;CDS_Target=FBgn0034455.1 86 3 .;locus=RLOC_00000975
ChrX	stalkie_big_nohaplotig	exon	16969229	16969914	99	+	.	Parent=FBgn0034455.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16969231	16969313	.	+	0	Parent=FBgn0034455.1.mrna1
ChrX	gffcl	locus	16970622	16971124	.	+	.	ID=RLOC_00000976;geneIDs=comp119165_c0_seq1.path1;transcripts=comp119165_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16970622	16971124	.	+	.	ID=comp119165_c0_seq1.mrna1;geneID=comp119165_c0_seq1.path1;Name=comp119165_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=503;mismatches=0;indels=0;unknowns=0;Target=comp119165_c0_seq1 503 1 .;CDS_Target=comp119165_c0_seq1 367 326 .;locus=RLOC_00000976
ChrX	stalkie_big_nohaplotig	exon	16970622	16971124	100	+	.	Parent=comp119165_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16970947	16970988	.	+	0	Parent=comp119165_c0_seq1.mrna1
ChrX	gffcl	locus	16973755	16975732	.	.	.	ID=RLOC_00000977;geneIDs=FBgn0033699.1.path1,comp112470_c0_seq1.path1,comp153623_c0_seq1.path1;transcripts=FBgn0033699.1.mrna1,comp112470_c0_seq1.mrna1,comp153623_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16973755	16975732	.	+	.	ID=FBgn0033699.1.mrna1;geneID=FBgn0033699.1.path1;Name=FBgn0033699.1;Dir=sensecoverage=100.0;identity=100.0;matches=537;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000977
ChrX	stalkie_big_nohaplotig	exon	16973755	16973838	100	+	.	Parent=FBgn0033699.1.mrna1;Target=FBgn0033699.1 1 84 +
ChrX	stalkie_big_nohaplotig	exon	16974496	16974621	100	+	.	Parent=FBgn0033699.1.mrna1;Target=FBgn0033699.1 85 210 +
ChrX	stalkie_big_nohaplotig	exon	16975182	16975387	100	+	.	Parent=FBgn0033699.1.mrna1;Target=FBgn0033699.1 211 416 +
ChrX	stalkie_big_nohaplotig	exon	16975612	16975732	100	+	.	Parent=FBgn0033699.1.mrna1;Target=FBgn0033699.1 417 537 +
ChrX	stalkie_big_nohaplotig	CDS	16973755	16973838	.	+	0	Parent=FBgn0033699.1.mrna1;Target=FBgn0033699.1 1 84 +
ChrX	stalkie_big_nohaplotig	CDS	16974496	16974621	.	+	0	Parent=FBgn0033699.1.mrna1;Target=FBgn0033699.1 85 210 +
ChrX	stalkie_big_nohaplotig	CDS	16975182	16975387	.	+	0	Parent=FBgn0033699.1.mrna1;Target=FBgn0033699.1 211 416 +
ChrX	stalkie_big_nohaplotig	CDS	16975612	16975732	.	+	1	Parent=FBgn0033699.1.mrna1;Target=FBgn0033699.1 417 537 +
ChrX	stalkie_big_nohaplotig	mRNA	16973815	16974237	.	-	.	ID=comp112470_c0_seq1.mrna1;geneID=comp112470_c0_seq1.path1;Name=comp112470_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=423;mismatches=0;indels=0;unknowns=0;Target=comp112470_c0_seq1 423 1 .;CDS_Target=comp112470_c0_seq1 129 49 .;locus=RLOC_00000977
ChrX	stalkie_big_nohaplotig	exon	16973815	16974237	100	-	.	Parent=comp112470_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16974109	16974189	.	-	0	Parent=comp112470_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16974600	16974992	.	+	.	ID=comp153623_c0_seq1.mrna1;geneID=comp153623_c0_seq1.path1;Name=comp153623_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=393;mismatches=0;indels=0;unknowns=0;Target=comp153623_c0_seq1 393 1 .;CDS_Target=comp153623_c0_seq1 393 301 .;locus=RLOC_00000977
ChrX	stalkie_big_nohaplotig	exon	16974600	16974992	100	+	.	Parent=comp153623_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16974900	16974992	.	+	0	Parent=comp153623_c0_seq1.mrna1
ChrX	gffcl	locus	16975839	16976089	.	+	.	ID=RLOC_00000978;geneIDs=comp188047_c0_seq1.path1;transcripts=comp188047_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16975839	16976089	.	+	.	ID=comp188047_c0_seq1.mrna1;geneID=comp188047_c0_seq1.path1;Name=comp188047_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=251;mismatches=0;indels=0;unknowns=0;Target=comp188047_c0_seq1 251 1 .;CDS_Target=comp188047_c0_seq1 89 3 .;locus=RLOC_00000978
ChrX	stalkie_big_nohaplotig	exon	16975839	16976089	100	+	.	Parent=comp188047_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	16975841	16975927	.	+	0	Parent=comp188047_c0_seq1.mrna1
ChrX	gffcl	locus	16984654	16987943	.	+	.	ID=RLOC_00000979;geneIDs=FBgn0031634.1.path1;transcripts=FBgn0031634.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16984654	16987943	.	+	.	ID=FBgn0031634.1.mrna1;geneID=FBgn0031634.1.path1;Name=FBgn0031634.1;Dir=sensecoverage=100.0;identity=100.0;matches=2130;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000979
ChrX	stalkie_big_nohaplotig	exon	16984654	16984699	100	+	.	Parent=FBgn0031634.1.mrna1;Target=FBgn0031634.1 1 46 +
ChrX	stalkie_big_nohaplotig	exon	16984826	16985063	100	+	.	Parent=FBgn0031634.1.mrna1;Target=FBgn0031634.1 47 284 +
ChrX	stalkie_big_nohaplotig	exon	16985122	16985236	100	+	.	Parent=FBgn0031634.1.mrna1;Target=FBgn0031634.1 285 399 +
ChrX	stalkie_big_nohaplotig	exon	16985421	16985666	100	+	.	Parent=FBgn0031634.1.mrna1;Target=FBgn0031634.1 400 645 +
ChrX	stalkie_big_nohaplotig	exon	16986304	16986896	100	+	.	Parent=FBgn0031634.1.mrna1;Target=FBgn0031634.1 646 1238 +
ChrX	stalkie_big_nohaplotig	exon	16986966	16987481	100	+	.	Parent=FBgn0031634.1.mrna1;Target=FBgn0031634.1 1239 1754 +
ChrX	stalkie_big_nohaplotig	exon	16987568	16987943	100	+	.	Parent=FBgn0031634.1.mrna1;Target=FBgn0031634.1 1755 2130 +
ChrX	stalkie_big_nohaplotig	CDS	16984654	16984699	.	+	0	Parent=FBgn0031634.1.mrna1;Target=FBgn0031634.1 1 46 +
ChrX	stalkie_big_nohaplotig	CDS	16984826	16985063	.	+	2	Parent=FBgn0031634.1.mrna1;Target=FBgn0031634.1 47 284 +
ChrX	stalkie_big_nohaplotig	CDS	16985122	16985236	.	+	1	Parent=FBgn0031634.1.mrna1;Target=FBgn0031634.1 285 399 +
ChrX	stalkie_big_nohaplotig	CDS	16985421	16985666	.	+	0	Parent=FBgn0031634.1.mrna1;Target=FBgn0031634.1 400 645 +
ChrX	stalkie_big_nohaplotig	CDS	16986304	16986896	.	+	0	Parent=FBgn0031634.1.mrna1;Target=FBgn0031634.1 646 1238 +
ChrX	stalkie_big_nohaplotig	CDS	16986966	16987481	.	+	1	Parent=FBgn0031634.1.mrna1;Target=FBgn0031634.1 1239 1754 +
ChrX	stalkie_big_nohaplotig	CDS	16987568	16987943	.	+	1	Parent=FBgn0031634.1.mrna1;Target=FBgn0031634.1 1755 2130 +
ChrX	gffcl	locus	16990873	16993485	.	+	.	ID=RLOC_00000980;geneIDs=FBgn0032343.1.path1;transcripts=FBgn0032343.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	16990873	16993485	.	+	.	ID=FBgn0032343.1.mrna1;geneID=FBgn0032343.1.path1;Name=FBgn0032343.1;Dir=sensecoverage=100.0;identity=99.9;matches=1369;mismatches=2;indels=0;unknowns=0;locus=RLOC_00000980
ChrX	stalkie_big_nohaplotig	exon	16990873	16991234	100	+	.	Parent=FBgn0032343.1.mrna1;Target=FBgn0032343.1 1 362 +
ChrX	stalkie_big_nohaplotig	exon	16992402	16993333	99	+	.	Parent=FBgn0032343.1.mrna1;Target=FBgn0032343.1 363 1294 +
ChrX	stalkie_big_nohaplotig	exon	16993409	16993485	100	+	.	Parent=FBgn0032343.1.mrna1;Target=FBgn0032343.1 1295 1371 +
ChrX	stalkie_big_nohaplotig	CDS	16990873	16991234	.	+	0	Parent=FBgn0032343.1.mrna1;Target=FBgn0032343.1 1 362 +
ChrX	stalkie_big_nohaplotig	CDS	16992402	16993333	.	+	1	Parent=FBgn0032343.1.mrna1;Target=FBgn0032343.1 363 1294 +
ChrX	stalkie_big_nohaplotig	CDS	16993409	16993485	.	+	2	Parent=FBgn0032343.1.mrna1;Target=FBgn0032343.1 1295 1371 +
ChrX	gffcl	locus	17003155	17003664	.	+	.	ID=RLOC_00000981;geneIDs=FBgn0032921.1.path1;transcripts=FBgn0032921.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17003155	17003664	.	+	.	ID=FBgn0032921.1.mrna1;geneID=FBgn0032921.1.path1;Name=FBgn0032921.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=509;mismatches=1;indels=0;unknowns=0;Target=FBgn0032921.1 510 1 .;locus=RLOC_00000981
ChrX	stalkie_big_nohaplotig	exon	17003155	17003664	99	+	.	Parent=FBgn0032921.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17003155	17003664	.	+	0	Parent=FBgn0032921.1.mrna1
ChrX	gffcl	locus	17003764	17004922	.	-	.	ID=RLOC_00000982;geneIDs=FBgn0032922.1.path1;transcripts=FBgn0032922.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17003764	17004922	.	-	.	ID=FBgn0032922.1.mrna1;geneID=FBgn0032922.1.path1;Name=FBgn0032922.1;Dir=sensecoverage=100.0;identity=99.9;matches=953;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000982
ChrX	stalkie_big_nohaplotig	exon	17003764	17003879	100	-	.	Parent=FBgn0032922.1.mrna1;Target=FBgn0032922.1 839 954 +
ChrX	stalkie_big_nohaplotig	exon	17003932	17004091	100	-	.	Parent=FBgn0032922.1.mrna1;Target=FBgn0032922.1 679 838 +
ChrX	stalkie_big_nohaplotig	exon	17004144	17004516	100	-	.	Parent=FBgn0032922.1.mrna1;Target=FBgn0032922.1 306 678 +
ChrX	stalkie_big_nohaplotig	exon	17004568	17004732	99	-	.	Parent=FBgn0032922.1.mrna1;Target=FBgn0032922.1 141 305 +
ChrX	stalkie_big_nohaplotig	exon	17004783	17004922	100	-	.	Parent=FBgn0032922.1.mrna1;Target=FBgn0032922.1 1 140 +
ChrX	stalkie_big_nohaplotig	CDS	17003764	17003879	.	-	2	Parent=FBgn0032922.1.mrna1;Target=FBgn0032922.1 839 954 +
ChrX	stalkie_big_nohaplotig	CDS	17003932	17004091	.	-	0	Parent=FBgn0032922.1.mrna1;Target=FBgn0032922.1 679 838 +
ChrX	stalkie_big_nohaplotig	CDS	17004144	17004516	.	-	1	Parent=FBgn0032922.1.mrna1;Target=FBgn0032922.1 306 678 +
ChrX	stalkie_big_nohaplotig	CDS	17004568	17004732	.	-	1	Parent=FBgn0032922.1.mrna1;Target=FBgn0032922.1 141 305 +
ChrX	stalkie_big_nohaplotig	CDS	17004783	17004922	.	-	0	Parent=FBgn0032922.1.mrna1;Target=FBgn0032922.1 1 140 +
ChrX	gffcl	locus	17009271	17011147	.	-	.	ID=RLOC_00000983;geneIDs=ORF474.path1;transcripts=ORF474.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17009271	17011147	.	-	.	ID=ORF474.mrna1;geneID=ORF474.path1;Name=ORF474;Dir=sensecoverage=100.0;identity=99.8;matches=1758;mismatches=2;indels=1;unknowns=0;Target=ORF474 3 23 +;locus=RLOC_00000983
ChrX	stalkie_big_nohaplotig	exon	17009271	17010581	99	-	.	Parent=ORF474.mrna1;Target=ORF474 451 1761 +
ChrX	stalkie_big_nohaplotig	exon	17010639	17010753	100	-	.	Parent=ORF474.mrna1;Target=ORF474 336 450 +
ChrX	stalkie_big_nohaplotig	exon	17010814	17011147	99	-	.	Parent=ORF474.mrna1;Target=ORF474 1 335 +
ChrX	stalkie_big_nohaplotig	CDS	17011126	17011145	.	-	0	Parent=ORF474.mrna1
ChrX	gffcl	locus	17015223	17018473	.	+	.	ID=RLOC_00000984;geneIDs=FBgn0024371.1.path1;transcripts=FBgn0024371.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17015223	17018473	.	+	.	ID=FBgn0024371.1.mrna1;geneID=FBgn0024371.1.path1;Name=FBgn0024371.1;Dir=sensecoverage=100.0;identity=100.0;matches=975;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000984
ChrX	stalkie_big_nohaplotig	exon	17015223	17015414	100	+	.	Parent=FBgn0024371.1.mrna1;Target=FBgn0024371.1 1 192 +
ChrX	stalkie_big_nohaplotig	exon	17015603	17015712	100	+	.	Parent=FBgn0024371.1.mrna1;Target=FBgn0024371.1 193 302 +
ChrX	stalkie_big_nohaplotig	exon	17016297	17016552	100	+	.	Parent=FBgn0024371.1.mrna1;Target=FBgn0024371.1 303 558 +
ChrX	stalkie_big_nohaplotig	exon	17016621	17016936	100	+	.	Parent=FBgn0024371.1.mrna1;Target=FBgn0024371.1 559 874 +
ChrX	stalkie_big_nohaplotig	exon	17018373	17018473	100	+	.	Parent=FBgn0024371.1.mrna1;Target=FBgn0024371.1 875 975 +
ChrX	stalkie_big_nohaplotig	CDS	17015223	17015414	.	+	0	Parent=FBgn0024371.1.mrna1;Target=FBgn0024371.1 1 192 +
ChrX	stalkie_big_nohaplotig	CDS	17015603	17015712	.	+	0	Parent=FBgn0024371.1.mrna1;Target=FBgn0024371.1 193 302 +
ChrX	stalkie_big_nohaplotig	CDS	17016297	17016552	.	+	1	Parent=FBgn0024371.1.mrna1;Target=FBgn0024371.1 303 558 +
ChrX	stalkie_big_nohaplotig	CDS	17016621	17016936	.	+	0	Parent=FBgn0024371.1.mrna1;Target=FBgn0024371.1 559 874 +
ChrX	stalkie_big_nohaplotig	CDS	17018373	17018473	.	+	2	Parent=FBgn0024371.1.mrna1;Target=FBgn0024371.1 875 975 +
ChrX	gffcl	locus	17020471	17022210	.	-	.	ID=RLOC_00000985;geneIDs=FBgn0032919.1.path1;transcripts=FBgn0032919.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17020471	17022210	.	-	.	ID=FBgn0032919.1.mrna1;geneID=FBgn0032919.1.path1;Name=FBgn0032919.1;Dir=sensecoverage=100.0;identity=99.9;matches=1469;mismatches=1;indels=0;unknowns=0;locus=RLOC_00000985
ChrX	stalkie_big_nohaplotig	exon	17020471	17021525	100	-	.	Parent=FBgn0032919.1.mrna1;Target=FBgn0032919.1 416 1470 +
ChrX	stalkie_big_nohaplotig	exon	17021713	17021971	100	-	.	Parent=FBgn0032919.1.mrna1;Target=FBgn0032919.1 157 415 +
ChrX	stalkie_big_nohaplotig	exon	17022055	17022210	99	-	.	Parent=FBgn0032919.1.mrna1;Target=FBgn0032919.1 1 156 +
ChrX	stalkie_big_nohaplotig	CDS	17020471	17021525	.	-	2	Parent=FBgn0032919.1.mrna1;Target=FBgn0032919.1 416 1470 +
ChrX	stalkie_big_nohaplotig	CDS	17021713	17021971	.	-	0	Parent=FBgn0032919.1.mrna1;Target=FBgn0032919.1 157 415 +
ChrX	stalkie_big_nohaplotig	CDS	17022055	17022210	.	-	0	Parent=FBgn0032919.1.mrna1;Target=FBgn0032919.1 1 156 +
ChrX	gffcl	locus	17026500	17034395	.	+	.	ID=RLOC_00000986;geneIDs=FBgn0023388.1.path1;transcripts=FBgn0023388.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17026500	17034395	.	+	.	ID=FBgn0023388.1.mrna1;geneID=FBgn0023388.1.path1;Name=FBgn0023388.1;Dir=sensecoverage=100.0;identity=99.8;matches=3504;mismatches=6;indels=0;unknowns=0;locus=RLOC_00000986
ChrX	stalkie_big_nohaplotig	exon	17026500	17026666	100	+	.	Parent=FBgn0023388.1.mrna1;Target=FBgn0023388.1 1 167 +
ChrX	stalkie_big_nohaplotig	exon	17027523	17028182	99	+	.	Parent=FBgn0023388.1.mrna1;Target=FBgn0023388.1 168 827 +
ChrX	stalkie_big_nohaplotig	exon	17028259	17028683	100	+	.	Parent=FBgn0023388.1.mrna1;Target=FBgn0023388.1 828 1252 +
ChrX	stalkie_big_nohaplotig	exon	17028745	17029018	100	+	.	Parent=FBgn0023388.1.mrna1;Target=FBgn0023388.1 1253 1526 +
ChrX	stalkie_big_nohaplotig	exon	17029082	17029229	100	+	.	Parent=FBgn0023388.1.mrna1;Target=FBgn0023388.1 1527 1674 +
ChrX	stalkie_big_nohaplotig	exon	17030100	17030360	100	+	.	Parent=FBgn0023388.1.mrna1;Target=FBgn0023388.1 1675 1935 +
ChrX	stalkie_big_nohaplotig	exon	17030453	17031039	100	+	.	Parent=FBgn0023388.1.mrna1;Target=FBgn0023388.1 1936 2522 +
ChrX	stalkie_big_nohaplotig	exon	17031098	17031347	98	+	.	Parent=FBgn0023388.1.mrna1;Target=FBgn0023388.1 2523 2772 +
ChrX	stalkie_big_nohaplotig	exon	17032486	17032758	100	+	.	Parent=FBgn0023388.1.mrna1;Target=FBgn0023388.1 2773 3045 +
ChrX	stalkie_big_nohaplotig	exon	17033201	17033474	99	+	.	Parent=FBgn0023388.1.mrna1;Target=FBgn0023388.1 3046 3319 +
ChrX	stalkie_big_nohaplotig	exon	17034205	17034395	100	+	.	Parent=FBgn0023388.1.mrna1;Target=FBgn0023388.1 3320 3510 +
ChrX	stalkie_big_nohaplotig	CDS	17026500	17026666	.	+	0	Parent=FBgn0023388.1.mrna1;Target=FBgn0023388.1 1 167 +
ChrX	stalkie_big_nohaplotig	CDS	17027523	17028182	.	+	1	Parent=FBgn0023388.1.mrna1;Target=FBgn0023388.1 168 827 +
ChrX	stalkie_big_nohaplotig	CDS	17028259	17028683	.	+	1	Parent=FBgn0023388.1.mrna1;Target=FBgn0023388.1 828 1252 +
ChrX	stalkie_big_nohaplotig	CDS	17028745	17029018	.	+	2	Parent=FBgn0023388.1.mrna1;Target=FBgn0023388.1 1253 1526 +
ChrX	stalkie_big_nohaplotig	CDS	17029082	17029229	.	+	1	Parent=FBgn0023388.1.mrna1;Target=FBgn0023388.1 1527 1674 +
ChrX	stalkie_big_nohaplotig	CDS	17030100	17030360	.	+	0	Parent=FBgn0023388.1.mrna1;Target=FBgn0023388.1 1675 1935 +
ChrX	stalkie_big_nohaplotig	CDS	17030453	17031039	.	+	0	Parent=FBgn0023388.1.mrna1;Target=FBgn0023388.1 1936 2522 +
ChrX	stalkie_big_nohaplotig	CDS	17031098	17031347	.	+	1	Parent=FBgn0023388.1.mrna1;Target=FBgn0023388.1 2523 2772 +
ChrX	stalkie_big_nohaplotig	CDS	17032486	17032758	.	+	0	Parent=FBgn0023388.1.mrna1;Target=FBgn0023388.1 2773 3045 +
ChrX	stalkie_big_nohaplotig	CDS	17033201	17033474	.	+	0	Parent=FBgn0023388.1.mrna1;Target=FBgn0023388.1 3046 3319 +
ChrX	stalkie_big_nohaplotig	CDS	17034205	17034395	.	+	2	Parent=FBgn0023388.1.mrna1;Target=FBgn0023388.1 3320 3510 +
ChrX	gffcl	locus	17042080	17044313	.	+	.	ID=RLOC_00000987;geneIDs=comp160583_c0_seq1.path1;transcripts=comp160583_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17042080	17044313	.	+	.	ID=comp160583_c0_seq1.mrna1;geneID=comp160583_c0_seq1.path1;Name=comp160583_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=2186;mismatches=2;indels=46;unknowns=0;Target=comp160583_c0_seq1 2188 1 .;CDS_Target=comp160583_c0_seq1 848 690 .;locus=RLOC_00000987
ChrX	stalkie_big_nohaplotig	exon	17042080	17044313	97	+	.	Parent=comp160583_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17042815	17042973	.	+	0	Parent=comp160583_c0_seq1.mrna1
ChrX	gffcl	locus	17044790	17045982	.	+	.	ID=RLOC_00000988;geneIDs=comp152993_c0_seq1.path1;transcripts=comp152993_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17044790	17045982	.	+	.	ID=comp152993_c0_seq1.mrna1;geneID=comp152993_c0_seq1.path1;Name=comp152993_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1192;mismatches=1;indels=0;unknowns=0;Target=comp152993_c0_seq1 1193 1 .;CDS_Target=comp152993_c0_seq1 905 780 .;locus=RLOC_00000988
ChrX	stalkie_big_nohaplotig	exon	17044790	17045982	99	+	.	Parent=comp152993_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17045569	17045694	.	+	0	Parent=comp152993_c0_seq1.mrna1
ChrX	gffcl	locus	17046206	17047980	.	+	.	ID=RLOC_00000989;geneIDs=comp156784_c0_seq1.path1;transcripts=comp156784_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17046206	17047980	.	+	.	ID=comp156784_c0_seq1.mrna1;geneID=comp156784_c0_seq1.path1;Name=comp156784_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=1746;mismatches=11;indels=20;unknowns=0;Target=comp156784_c0_seq1 1759 1 .;CDS_Target=comp156784_c0_seq1 516 379 .;locus=RLOC_00000989
ChrX	stalkie_big_nohaplotig	exon	17046206	17047980	98	+	.	Parent=comp156784_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17046584	17046721	.	+	0	Parent=comp156784_c0_seq1.mrna1
ChrX	gffcl	locus	17048276	17056476	.	-	.	ID=RLOC_00000990;geneIDs=comp142409_c0_seq1.path1;transcripts=comp142409_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17048276	17056476	.	-	.	ID=comp142409_c0_seq1.mrna1;geneID=comp142409_c0_seq1.path1;Name=comp142409_c0_seq1;Dir=indeterminatecoverage=92.8;identity=100.0;matches=435;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000990
ChrX	stalkie_big_nohaplotig	exon	17048276	17048708	100	-	.	Parent=comp142409_c0_seq1.mrna1;Target=comp142409_c0_seq1 469 37 .
ChrX	stalkie_big_nohaplotig	exon	17056475	17056476	100	-	.	Parent=comp142409_c0_seq1.mrna1;Target=comp142409_c0_seq1 36 35 .
ChrX	stalkie_big_nohaplotig	CDS	17048483	17048708	.	-	1	Parent=comp142409_c0_seq1.mrna1;Target=comp142409_c0_seq1 262 37 .
ChrX	stalkie_big_nohaplotig	CDS	17056475	17056476	.	-	0	Parent=comp142409_c0_seq1.mrna1;Target=comp142409_c0_seq1 36 35 .
ChrX	gffcl	locus	17050351	17052243	.	+	.	ID=RLOC_00000991;geneIDs=FBgn0031308.1.path1;transcripts=FBgn0031308.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17050351	17052243	.	+	.	ID=FBgn0031308.1.mrna1;geneID=FBgn0031308.1.path1;Name=FBgn0031308.1;Dir=sensecoverage=100.0;identity=100.0;matches=1488;mismatches=0;indels=0;unknowns=0;locus=RLOC_00000991
ChrX	stalkie_big_nohaplotig	exon	17050351	17050416	100	+	.	Parent=FBgn0031308.1.mrna1;Target=FBgn0031308.1 1 66 +
ChrX	stalkie_big_nohaplotig	exon	17050488	17050674	100	+	.	Parent=FBgn0031308.1.mrna1;Target=FBgn0031308.1 67 253 +
ChrX	stalkie_big_nohaplotig	exon	17050728	17051258	100	+	.	Parent=FBgn0031308.1.mrna1;Target=FBgn0031308.1 254 784 +
ChrX	stalkie_big_nohaplotig	exon	17051540	17052243	100	+	.	Parent=FBgn0031308.1.mrna1;Target=FBgn0031308.1 785 1488 +
ChrX	stalkie_big_nohaplotig	CDS	17050351	17050416	.	+	0	Parent=FBgn0031308.1.mrna1;Target=FBgn0031308.1 1 66 +
ChrX	stalkie_big_nohaplotig	CDS	17050488	17050674	.	+	0	Parent=FBgn0031308.1.mrna1;Target=FBgn0031308.1 67 253 +
ChrX	stalkie_big_nohaplotig	CDS	17050728	17051258	.	+	2	Parent=FBgn0031308.1.mrna1;Target=FBgn0031308.1 254 784 +
ChrX	stalkie_big_nohaplotig	CDS	17051540	17052243	.	+	2	Parent=FBgn0031308.1.mrna1;Target=FBgn0031308.1 785 1488 +
ChrX	gffcl	locus	17089233	17099085	.	+	.	ID=RLOC_00000994;geneIDs=FBgn0032415.1.path1;transcripts=FBgn0032415.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17089233	17099085	.	+	.	ID=FBgn0032415.1.mrna1;geneID=FBgn0032415.1.path1;Name=FBgn0032415.1;Dir=sensecoverage=100.0;identity=99.9;matches=929;mismatches=0;indels=1;unknowns=0;Target=FBgn0032415.1 3 59 +;locus=RLOC_00000994
ChrX	stalkie_big_nohaplotig	exon	17089233	17089552	99	+	.	Parent=FBgn0032415.1.mrna1;Target=FBgn0032415.1 1 321 +
ChrX	stalkie_big_nohaplotig	exon	17097014	17097157	100	+	.	Parent=FBgn0032415.1.mrna1;Target=FBgn0032415.1 322 465 +
ChrX	stalkie_big_nohaplotig	exon	17097364	17097543	100	+	.	Parent=FBgn0032415.1.mrna1;Target=FBgn0032415.1 466 645 +
ChrX	stalkie_big_nohaplotig	exon	17098801	17099085	100	+	.	Parent=FBgn0032415.1.mrna1;Target=FBgn0032415.1 646 930 +
ChrX	stalkie_big_nohaplotig	CDS	17089235	17089290	.	+	0	Parent=FBgn0032415.1.mrna1
ChrX	gffcl	locus	17099976	17102112	.	-	.	ID=RLOC_00000995;geneIDs=comp147238_c0_seq1.path1;transcripts=comp147238_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17099976	17102112	.	-	.	ID=comp147238_c0_seq1.mrna1;geneID=comp147238_c0_seq1.path1;Name=comp147238_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2135;mismatches=2;indels=0;unknowns=0;Target=comp147238_c0_seq1 2137 1 .;CDS_Target=comp147238_c0_seq1 995 861 .;locus=RLOC_00000995
ChrX	stalkie_big_nohaplotig	exon	17099976	17102112	99	-	.	Parent=comp147238_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17101118	17101252	.	-	0	Parent=comp147238_c0_seq1.mrna1
ChrX	gffcl	locus	17103218	17117430	.	-	.	ID=RLOC_00000996;geneIDs=FBgn0032414.1.path1;transcripts=FBgn0032414.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17103218	17117430	.	-	.	ID=FBgn0032414.1.mrna1;geneID=FBgn0032414.1.path1;Name=FBgn0032414.1;Dir=sensecoverage=100.0;identity=99.8;matches=4495;mismatches=7;indels=0;unknowns=0;locus=RLOC_00000996
ChrX	stalkie_big_nohaplotig	exon	17103218	17104611	100	-	.	Parent=FBgn0032414.1.mrna1;Target=FBgn0032414.1 3110 4503 +
ChrX	stalkie_big_nohaplotig	exon	17104815	17107376	99	-	.	Parent=FBgn0032414.1.mrna1;Target=FBgn0032414.1 548 3109 +
ChrX	stalkie_big_nohaplotig	exon	17107725	17107805	100	-	.	Parent=FBgn0032414.1.mrna1;Target=FBgn0032414.1 467 547 +
ChrX	stalkie_big_nohaplotig	exon	17109672	17110007	100	-	.	Parent=FBgn0032414.1.mrna1;Target=FBgn0032414.1 131 466 +
ChrX	stalkie_big_nohaplotig	exon	17117302	17117430	100	-	.	Parent=FBgn0032414.1.mrna1;Target=FBgn0032414.1 2 130 +
ChrX	stalkie_big_nohaplotig	CDS	17103218	17104611	.	-	2	Parent=FBgn0032414.1.mrna1;Target=FBgn0032414.1 3110 4503 +
ChrX	stalkie_big_nohaplotig	CDS	17104815	17107376	.	-	2	Parent=FBgn0032414.1.mrna1;Target=FBgn0032414.1 548 3109 +
ChrX	stalkie_big_nohaplotig	CDS	17107725	17107805	.	-	2	Parent=FBgn0032414.1.mrna1;Target=FBgn0032414.1 467 547 +
ChrX	stalkie_big_nohaplotig	CDS	17109672	17110007	.	-	2	Parent=FBgn0032414.1.mrna1;Target=FBgn0032414.1 131 466 +
ChrX	stalkie_big_nohaplotig	CDS	17117302	17117428	.	-	0	Parent=FBgn0032414.1.mrna1;Target=FBgn0032414.1 4 130 +
ChrX	gffcl	locus	17158179	17159072	.	+	.	ID=RLOC_00000997;geneIDs=comp161565_c0_seq1.path2;transcripts=comp161565_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	17158179	17159072	.	+	.	ID=comp161565_c0_seq1.mrna2;geneID=comp161565_c0_seq1.path2;Name=comp161565_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=618;mismatches=13;indels=0;unknowns=0;Target=comp161565_c0_seq1 272 3 .;locus=RLOC_00000997
ChrX	stalkie_big_nohaplotig	exon	17158179	17158593	97	+	.	Parent=comp161565_c0_seq1.mrna2;Target=comp161565_c0_seq1 415 1 .
ChrX	stalkie_big_nohaplotig	exon	17158857	17159072	98	+	.	Parent=comp161565_c0_seq1.mrna2;Target=comp161565_c0_seq1 631 416 .
ChrX	stalkie_big_nohaplotig	CDS	17158181	17158450	.	+	0	Parent=comp161565_c0_seq1.mrna2
ChrX	gffcl	locus	17177974	17180282	.	+	.	ID=RLOC_00000999;geneIDs=comp115897_c0_seq1.path1,comp152810_c0_seq1.path1;transcripts=comp152810_c0_seq1.mrna1,comp115897_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17177974	17180282	.	+	.	ID=comp152810_c0_seq1.mrna1;geneID=comp152810_c0_seq1.path1;Name=comp152810_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=901;mismatches=2;indels=1;unknowns=0;Target=comp152810_c0_seq1 201 746 +;locus=RLOC_00000999
ChrX	stalkie_big_nohaplotig	exon	17177974	17178158	100	+	.	Parent=comp152810_c0_seq1.mrna1;Target=comp152810_c0_seq1 1 185 +
ChrX	stalkie_big_nohaplotig	exon	17179564	17180282	99	+	.	Parent=comp152810_c0_seq1.mrna1;Target=comp152810_c0_seq1 186 903 +
ChrX	stalkie_big_nohaplotig	CDS	17179579	17180124	.	+	0	Parent=comp152810_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17178136	17178585	.	+	.	ID=comp115897_c0_seq1.mrna1;geneID=comp115897_c0_seq1.path1;Name=comp115897_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=449;mismatches=1;indels=0;unknowns=0;Target=comp115897_c0_seq1 450 1 .;CDS_Target=comp115897_c0_seq1 391 332 .;locus=RLOC_00000999
ChrX	stalkie_big_nohaplotig	exon	17178136	17178585	99	+	.	Parent=comp115897_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17178467	17178526	.	+	0	Parent=comp115897_c0_seq1.mrna1
ChrX	gffcl	locus	17192493	17192948	.	-	.	ID=RLOC_00001000;geneIDs=comp15761_c0_seq1.path1;transcripts=comp15761_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17192493	17192948	.	-	.	ID=comp15761_c0_seq1.mrna1;geneID=comp15761_c0_seq1.path1;Name=comp15761_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=456;mismatches=0;indels=0;unknowns=0;Target=comp15761_c0_seq1 457 2 .;CDS_Target=comp15761_c0_seq1 234 4 .;locus=RLOC_00001000
ChrX	stalkie_big_nohaplotig	exon	17192493	17192948	100	-	.	Parent=comp15761_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17192716	17192946	.	-	0	Parent=comp15761_c0_seq1.mrna1
ChrX	gffcl	locus	17236316	17357006	.	+	.	ID=RLOC_00001001;geneIDs=FBgn0031530.1.path1;transcripts=FBgn0031530.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17236316	17357006	.	+	.	ID=FBgn0031530.1.mrna1;geneID=FBgn0031530.1.path1;Name=FBgn0031530.1;Dir=sensecoverage=100.0;identity=100.0;matches=2165;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001001
ChrX	stalkie_big_nohaplotig	exon	17236316	17236351	100	+	.	Parent=FBgn0031530.1.mrna1;Target=FBgn0031530.1 1 36 +
ChrX	stalkie_big_nohaplotig	exon	17254596	17254871	99	+	.	Parent=FBgn0031530.1.mrna1;Target=FBgn0031530.1 37 312 +
ChrX	stalkie_big_nohaplotig	exon	17344276	17344796	100	+	.	Parent=FBgn0031530.1.mrna1;Target=FBgn0031530.1 313 833 +
ChrX	stalkie_big_nohaplotig	exon	17353625	17353723	100	+	.	Parent=FBgn0031530.1.mrna1;Target=FBgn0031530.1 834 932 +
ChrX	stalkie_big_nohaplotig	exon	17353818	17353885	100	+	.	Parent=FBgn0031530.1.mrna1;Target=FBgn0031530.1 933 1000 +
ChrX	stalkie_big_nohaplotig	exon	17354019	17354706	100	+	.	Parent=FBgn0031530.1.mrna1;Target=FBgn0031530.1 1001 1688 +
ChrX	stalkie_big_nohaplotig	exon	17354916	17355088	100	+	.	Parent=FBgn0031530.1.mrna1;Target=FBgn0031530.1 1689 1861 +
ChrX	stalkie_big_nohaplotig	exon	17356702	17357006	100	+	.	Parent=FBgn0031530.1.mrna1;Target=FBgn0031530.1 1862 2166 +
ChrX	stalkie_big_nohaplotig	CDS	17236316	17236351	.	+	0	Parent=FBgn0031530.1.mrna1;Target=FBgn0031530.1 1 36 +
ChrX	stalkie_big_nohaplotig	CDS	17254596	17254871	.	+	0	Parent=FBgn0031530.1.mrna1;Target=FBgn0031530.1 37 312 +
ChrX	stalkie_big_nohaplotig	CDS	17344276	17344796	.	+	0	Parent=FBgn0031530.1.mrna1;Target=FBgn0031530.1 313 833 +
ChrX	stalkie_big_nohaplotig	CDS	17353625	17353723	.	+	1	Parent=FBgn0031530.1.mrna1;Target=FBgn0031530.1 834 932 +
ChrX	stalkie_big_nohaplotig	CDS	17353818	17353885	.	+	1	Parent=FBgn0031530.1.mrna1;Target=FBgn0031530.1 933 1000 +
ChrX	stalkie_big_nohaplotig	CDS	17354019	17354706	.	+	2	Parent=FBgn0031530.1.mrna1;Target=FBgn0031530.1 1001 1688 +
ChrX	stalkie_big_nohaplotig	CDS	17354916	17355088	.	+	1	Parent=FBgn0031530.1.mrna1;Target=FBgn0031530.1 1689 1861 +
ChrX	stalkie_big_nohaplotig	CDS	17356702	17357006	.	+	2	Parent=FBgn0031530.1.mrna1;Target=FBgn0031530.1 1862 2166 +
ChrX	gffcl	locus	17357205	17360352	.	-	.	ID=RLOC_00001002;geneIDs=comp159816_c2_seq1.path1;transcripts=comp159816_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17357205	17360352	.	-	.	ID=comp159816_c2_seq1.mrna1;geneID=comp159816_c2_seq1.path1;Name=comp159816_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=3140;mismatches=4;indels=9;unknowns=0;Target=comp159816_c2_seq1 3149 1 .;CDS_Target=comp159816_c2_seq1 3148 2915 .;locus=RLOC_00001002
ChrX	stalkie_big_nohaplotig	exon	17357205	17360352	99	-	.	Parent=comp159816_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17357206	17357439	.	-	0	Parent=comp159816_c2_seq1.mrna1
ChrX	gffcl	locus	17360439	17360758	.	-	.	ID=RLOC_00001003;geneIDs=comp140391_c0_seq1.path1;transcripts=comp140391_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17360439	17360758	.	-	.	ID=comp140391_c0_seq1.mrna1;geneID=comp140391_c0_seq1.path1;Name=comp140391_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=319;mismatches=1;indels=0;unknowns=0;Target=comp140391_c0_seq1 320 1 .;CDS_Target=comp140391_c0_seq1 124 2 .;locus=RLOC_00001003
ChrX	stalkie_big_nohaplotig	exon	17360439	17360758	99	-	.	Parent=comp140391_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17360635	17360757	.	-	0	Parent=comp140391_c0_seq1.mrna1
ChrX	gffcl	locus	17382784	17383140	.	-	.	ID=RLOC_00001004;geneIDs=comp144439_c0_seq1.path2;transcripts=comp144439_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	17382784	17383140	.	-	.	ID=comp144439_c0_seq1.mrna2;geneID=comp144439_c0_seq1.path2;Name=comp144439_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.4;matches=355;mismatches=2;indels=0;unknowns=0;Target=comp144439_c0_seq1 357 1 .;CDS_Target=comp144439_c0_seq1 41 3 .;locus=RLOC_00001004
ChrX	stalkie_big_nohaplotig	exon	17382784	17383140	99	-	.	Parent=comp144439_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	17383100	17383138	.	-	0	Parent=comp144439_c0_seq1.mrna2
ChrX	gffcl	locus	17384680	17387353	.	-	.	ID=RLOC_00001005;geneIDs=ORF204.path1;transcripts=ORF204.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17384680	17387353	.	-	.	ID=ORF204.mrna1;geneID=ORF204.path1;Name=ORF204;Dir=sensecoverage=96.1;identity=99.7;matches=2384;mismatches=3;indels=3;unknowns=0;locus=RLOC_00001005
ChrX	stalkie_big_nohaplotig	exon	17384680	17386128	99	-	.	Parent=ORF204.mrna1;Target=ORF204 1036 2487 +
ChrX	stalkie_big_nohaplotig	exon	17386199	17386305	100	-	.	Parent=ORF204.mrna1;Target=ORF204 929 1035 +
ChrX	stalkie_big_nohaplotig	exon	17386523	17387353	100	-	.	Parent=ORF204.mrna1;Target=ORF204 98 928 +
ChrX	stalkie_big_nohaplotig	CDS	17384680	17386128	.	-	0	Parent=ORF204.mrna1;Target=ORF204 1036 2487 +
ChrX	stalkie_big_nohaplotig	CDS	17386199	17386305	.	-	2	Parent=ORF204.mrna1;Target=ORF204 929 1035 +
ChrX	stalkie_big_nohaplotig	CDS	17386523	17387351	.	-	0	Parent=ORF204.mrna1;Target=ORF204 100 928 +
ChrX	gffcl	locus	17395260	17397291	.	+	.	ID=RLOC_00001006;geneIDs=FBgn0034558.1.path1;transcripts=FBgn0034558.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17395260	17397291	.	+	.	ID=FBgn0034558.1.mrna1;geneID=FBgn0034558.1.path1;Name=FBgn0034558.1;Dir=sensecoverage=100.0;identity=99.8;matches=581;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001006
ChrX	stalkie_big_nohaplotig	exon	17395260	17395337	100	+	.	Parent=FBgn0034558.1.mrna1;Target=FBgn0034558.1 1 78 +
ChrX	stalkie_big_nohaplotig	exon	17395400	17395434	100	+	.	Parent=FBgn0034558.1.mrna1;Target=FBgn0034558.1 79 113 +
ChrX	stalkie_big_nohaplotig	exon	17395526	17395773	100	+	.	Parent=FBgn0034558.1.mrna1;Target=FBgn0034558.1 114 361 +
ChrX	stalkie_big_nohaplotig	exon	17397000	17397201	99	+	.	Parent=FBgn0034558.1.mrna1;Target=FBgn0034558.1 362 563 +
ChrX	stalkie_big_nohaplotig	exon	17397273	17397291	100	+	.	Parent=FBgn0034558.1.mrna1;Target=FBgn0034558.1 564 582 +
ChrX	stalkie_big_nohaplotig	CDS	17395260	17395337	.	+	0	Parent=FBgn0034558.1.mrna1;Target=FBgn0034558.1 1 78 +
ChrX	stalkie_big_nohaplotig	CDS	17395400	17395434	.	+	0	Parent=FBgn0034558.1.mrna1;Target=FBgn0034558.1 79 113 +
ChrX	stalkie_big_nohaplotig	CDS	17395526	17395773	.	+	1	Parent=FBgn0034558.1.mrna1;Target=FBgn0034558.1 114 361 +
ChrX	stalkie_big_nohaplotig	CDS	17397000	17397201	.	+	2	Parent=FBgn0034558.1.mrna1;Target=FBgn0034558.1 362 563 +
ChrX	stalkie_big_nohaplotig	CDS	17397273	17397291	.	+	1	Parent=FBgn0034558.1.mrna1;Target=FBgn0034558.1 564 582 +
ChrX	gffcl	locus	17400818	17402479	.	-	.	ID=RLOC_00001007;geneIDs=comp161966_c0_seq1.path1;transcripts=comp161966_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17400818	17402479	.	-	.	ID=comp161966_c0_seq1.mrna1;geneID=comp161966_c0_seq1.path1;Name=comp161966_c0_seq1;Dir=indeterminatecoverage=87.4;identity=97.3;matches=1640;mismatches=8;indels=38;unknowns=0;Target=comp161966_c0_seq1 1914 243 .;CDS_Target=comp161966_c0_seq1 1013 909 .;locus=RLOC_00001007
ChrX	stalkie_big_nohaplotig	exon	17400818	17402479	97	-	.	Parent=comp161966_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17401726	17401814	.	-	0	Parent=comp161966_c0_seq1.mrna1
ChrX	gffcl	locus	17411225	17411766	.	-	.	ID=RLOC_00001008;geneIDs=FBgn0031529.1.path1;transcripts=FBgn0031529.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17411225	17411766	.	-	.	ID=FBgn0031529.1.mrna1;geneID=FBgn0031529.1.path1;Name=FBgn0031529.1;Dir=sensecoverage=100.0;identity=100.0;matches=468;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001008
ChrX	stalkie_big_nohaplotig	exon	17411225	17411532	100	-	.	Parent=FBgn0031529.1.mrna1;Target=FBgn0031529.1 161 468 +
ChrX	stalkie_big_nohaplotig	exon	17411607	17411766	100	-	.	Parent=FBgn0031529.1.mrna1;Target=FBgn0031529.1 1 160 +
ChrX	stalkie_big_nohaplotig	CDS	17411225	17411532	.	-	2	Parent=FBgn0031529.1.mrna1;Target=FBgn0031529.1 161 468 +
ChrX	stalkie_big_nohaplotig	CDS	17411607	17411766	.	-	0	Parent=FBgn0031529.1.mrna1;Target=FBgn0031529.1 1 160 +
ChrX	gffcl	locus	17413397	17416979	.	+	.	ID=RLOC_00001009;geneIDs=FBgn0016698.1.path1;transcripts=FBgn0016698.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17413397	17416979	.	+	.	ID=FBgn0016698.1.mrna1;geneID=FBgn0016698.1.path1;Name=FBgn0016698.1;Dir=sensecoverage=100.0;identity=99.9;matches=1742;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001009
ChrX	stalkie_big_nohaplotig	exon	17413397	17413485	100	+	.	Parent=FBgn0016698.1.mrna1;Target=FBgn0016698.1 1 89 +
ChrX	stalkie_big_nohaplotig	exon	17413770	17413858	100	+	.	Parent=FBgn0016698.1.mrna1;Target=FBgn0016698.1 90 178 +
ChrX	stalkie_big_nohaplotig	exon	17413922	17414211	100	+	.	Parent=FBgn0016698.1.mrna1;Target=FBgn0016698.1 179 468 +
ChrX	stalkie_big_nohaplotig	exon	17414274	17414616	100	+	.	Parent=FBgn0016698.1.mrna1;Target=FBgn0016698.1 469 811 +
ChrX	stalkie_big_nohaplotig	exon	17414675	17414775	100	+	.	Parent=FBgn0016698.1.mrna1;Target=FBgn0016698.1 812 912 +
ChrX	stalkie_big_nohaplotig	exon	17415046	17415153	100	+	.	Parent=FBgn0016698.1.mrna1;Target=FBgn0016698.1 913 1020 +
ChrX	stalkie_big_nohaplotig	exon	17416257	17416979	99	+	.	Parent=FBgn0016698.1.mrna1;Target=FBgn0016698.1 1021 1743 +
ChrX	stalkie_big_nohaplotig	CDS	17413397	17413485	.	+	0	Parent=FBgn0016698.1.mrna1;Target=FBgn0016698.1 1 89 +
ChrX	stalkie_big_nohaplotig	CDS	17413770	17413858	.	+	1	Parent=FBgn0016698.1.mrna1;Target=FBgn0016698.1 90 178 +
ChrX	stalkie_big_nohaplotig	CDS	17413922	17414211	.	+	2	Parent=FBgn0016698.1.mrna1;Target=FBgn0016698.1 179 468 +
ChrX	stalkie_big_nohaplotig	CDS	17414274	17414616	.	+	0	Parent=FBgn0016698.1.mrna1;Target=FBgn0016698.1 469 811 +
ChrX	stalkie_big_nohaplotig	CDS	17414675	17414775	.	+	2	Parent=FBgn0016698.1.mrna1;Target=FBgn0016698.1 812 912 +
ChrX	stalkie_big_nohaplotig	CDS	17415046	17415153	.	+	0	Parent=FBgn0016698.1.mrna1;Target=FBgn0016698.1 913 1020 +
ChrX	stalkie_big_nohaplotig	CDS	17416257	17416979	.	+	0	Parent=FBgn0016698.1.mrna1;Target=FBgn0016698.1 1021 1743 +
ChrX	gffcl	locus	17415329	17416010	.	-	.	ID=RLOC_00001010;geneIDs=comp150520_c1_seq1.path1;transcripts=comp150520_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17415329	17416010	.	-	.	ID=comp150520_c1_seq1.mrna1;geneID=comp150520_c1_seq1.path1;Name=comp150520_c1_seq1;Dir=indeterminatecoverage=100.0;identity=93.7;matches=680;mismatches=2;indels=44;unknowns=0;Target=comp150520_c1_seq1 726 1 .;CDS_Target=comp150520_c1_seq1 84 1 .;locus=RLOC_00001010
ChrX	stalkie_big_nohaplotig	exon	17415329	17416010	93	-	.	Parent=comp150520_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17415928	17416010	.	-	0	Parent=comp150520_c1_seq1.mrna1
ChrX	gffcl	locus	17435080	17435711	.	+	.	ID=RLOC_00001011;geneIDs=comp117839_c0_seq1.path1;transcripts=comp117839_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17435080	17435711	.	+	.	ID=comp117839_c0_seq1.mrna1;geneID=comp117839_c0_seq1.path1;Name=comp117839_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=289;mismatches=0;indels=0;unknowns=0;Target=comp117839_c0_seq1 108 287 .;locus=RLOC_00001011
ChrX	stalkie_big_nohaplotig	exon	17435080	17435344	100	+	.	Parent=comp117839_c0_seq1.mrna1;Target=comp117839_c0_seq1 25 289 -
ChrX	stalkie_big_nohaplotig	exon	17435688	17435711	100	+	.	Parent=comp117839_c0_seq1.mrna1;Target=comp117839_c0_seq1 1 24 -
ChrX	stalkie_big_nohaplotig	CDS	17435082	17435261	.	+	0	Parent=comp117839_c0_seq1.mrna1
ChrX	gffcl	locus	17455306	17869257	.	.	.	ID=RLOC_00001013;geneIDs=comp147388_c0_seq1.path1,comp161438_c0_seq1.path1;transcripts=comp161438_c0_seq1.mrna1,comp147388_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17455306	17869257	.	-	.	ID=comp161438_c0_seq1.mrna1;geneID=comp161438_c0_seq1.path1;Name=comp161438_c0_seq1;Dir=indeterminatecoverage=73.6;identity=99.2;matches=2240;mismatches=11;indels=7;unknowns=0;locus=RLOC_00001013
ChrX	stalkie_big_nohaplotig	exon	17455306	17455369	93	-	.	Parent=comp161438_c0_seq1.mrna1;Target=comp161438_c0_seq1 2289 2226 .
ChrX	stalkie_big_nohaplotig	exon	17459065	17459068	100	-	.	Parent=comp161438_c0_seq1.mrna1;Target=comp161438_c0_seq1 2225 2222 .
ChrX	stalkie_big_nohaplotig	exon	17473178	17473186	100	-	.	Parent=comp161438_c0_seq1.mrna1;Target=comp161438_c0_seq1 2221 2213 .
ChrX	stalkie_big_nohaplotig	exon	17473798	17473802	80	-	.	Parent=comp161438_c0_seq1.mrna1;Target=comp161438_c0_seq1 2181 2178 .
ChrX	stalkie_big_nohaplotig	exon	17474134	17474151	88	-	.	Parent=comp161438_c0_seq1.mrna1;Target=comp161438_c0_seq1 2177 2160 .
ChrX	stalkie_big_nohaplotig	exon	17867106	17869257	99	-	.	Parent=comp161438_c0_seq1.mrna1;Target=comp161438_c0_seq1 2159 2 .
ChrX	stalkie_big_nohaplotig	CDS	17455306	17455369	.	-	1	Parent=comp161438_c0_seq1.mrna1;Target=comp161438_c0_seq1 2289 2226 .
ChrX	stalkie_big_nohaplotig	CDS	17459065	17459068	.	-	2	Parent=comp161438_c0_seq1.mrna1;Target=comp161438_c0_seq1 2225 2222 .
ChrX	stalkie_big_nohaplotig	CDS	17473178	17473186	.	-	2	Parent=comp161438_c0_seq1.mrna1;Target=comp161438_c0_seq1 2221 2213 .
ChrX	stalkie_big_nohaplotig	CDS	17473798	17473802	.	-	1	Parent=comp161438_c0_seq1.mrna1;Target=comp161438_c0_seq1 2181 2178 .
ChrX	stalkie_big_nohaplotig	CDS	17474134	17474151	.	-	1	Parent=comp161438_c0_seq1.mrna1;Target=comp161438_c0_seq1 2177 2160 .
ChrX	stalkie_big_nohaplotig	CDS	17867106	17867179	.	-	0	Parent=comp161438_c0_seq1.mrna1;Target=comp161438_c0_seq1 2159 2086 .
ChrX	stalkie_big_nohaplotig	mRNA	17455341	17456186	.	+	.	ID=comp147388_c0_seq1.mrna1;geneID=comp147388_c0_seq1.path1;Name=comp147388_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=840;mismatches=5;indels=1;unknowns=0;Target=comp147388_c0_seq1 845 1 .;CDS_Target=comp147388_c0_seq1 542 453 .;locus=RLOC_00001013
ChrX	stalkie_big_nohaplotig	exon	17455341	17456186	99	+	.	Parent=comp147388_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17455793	17455882	.	+	0	Parent=comp147388_c0_seq1.mrna1
ChrX	gffcl	locus	17462616	17478103	.	-	.	ID=RLOC_00001014;geneIDs=FBgn0085437.1.path1;transcripts=FBgn0085437.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17462616	17478103	.	-	.	ID=FBgn0085437.1.mrna1;geneID=FBgn0085437.1.path1;Name=FBgn0085437.1;Dir=sensecoverage=100.0;identity=99.2;matches=4649;mismatches=26;indels=13;unknowns=0;locus=RLOC_00001014
ChrX	stalkie_big_nohaplotig	exon	17462616	17462727	100	-	.	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 4647 4758 +
ChrX	stalkie_big_nohaplotig	exon	17462802	17463057	100	-	.	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 4391 4646 +
ChrX	stalkie_big_nohaplotig	exon	17463129	17463209	76	-	.	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 4312 4390 +
ChrX	stalkie_big_nohaplotig	exon	17463352	17464418	98	-	.	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 3167 4234 +
ChrX	stalkie_big_nohaplotig	exon	17464936	17465496	100	-	.	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 2606 3166 +
ChrX	stalkie_big_nohaplotig	exon	17468020	17468160	100	-	.	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 2465 2605 +
ChrX	stalkie_big_nohaplotig	exon	17468404	17468691	100	-	.	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 2177 2464 +
ChrX	stalkie_big_nohaplotig	exon	17469244	17469461	100	-	.	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 1959 2176 +
ChrX	stalkie_big_nohaplotig	exon	17469527	17470070	100	-	.	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 1415 1958 +
ChrX	stalkie_big_nohaplotig	exon	17471734	17471874	100	-	.	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 1274 1414 +
ChrX	stalkie_big_nohaplotig	exon	17471932	17472036	100	-	.	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 1169 1273 +
ChrX	stalkie_big_nohaplotig	exon	17476575	17476835	98	-	.	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 908 1168 +
ChrX	stalkie_big_nohaplotig	exon	17476900	17477298	99	-	.	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 509 907 +
ChrX	stalkie_big_nohaplotig	exon	17477528	17477747	100	-	.	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 289 508 +
ChrX	stalkie_big_nohaplotig	exon	17477816	17478103	100	-	.	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 1 288 +
ChrX	stalkie_big_nohaplotig	CDS	17462616	17462727	.	-	2	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 4647 4758 +
ChrX	stalkie_big_nohaplotig	CDS	17462802	17463057	.	-	0	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 4391 4646 +
ChrX	stalkie_big_nohaplotig	CDS	17463129	17463209	.	-	0	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 4312 4390 +
ChrX	stalkie_big_nohaplotig	CDS	17463352	17464418	.	-	2	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 3167 4234 +
ChrX	stalkie_big_nohaplotig	CDS	17464936	17465496	.	-	2	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 2606 3166 +
ChrX	stalkie_big_nohaplotig	CDS	17468020	17468160	.	-	2	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 2465 2605 +
ChrX	stalkie_big_nohaplotig	CDS	17468404	17468691	.	-	2	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 2177 2464 +
ChrX	stalkie_big_nohaplotig	CDS	17469244	17469461	.	-	1	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 1959 2176 +
ChrX	stalkie_big_nohaplotig	CDS	17469527	17470070	.	-	2	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 1415 1958 +
ChrX	stalkie_big_nohaplotig	CDS	17471734	17471874	.	-	2	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 1274 1414 +
ChrX	stalkie_big_nohaplotig	CDS	17471932	17472036	.	-	2	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 1169 1273 +
ChrX	stalkie_big_nohaplotig	CDS	17476575	17476835	.	-	2	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 908 1168 +
ChrX	stalkie_big_nohaplotig	CDS	17476900	17477298	.	-	2	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 509 907 +
ChrX	stalkie_big_nohaplotig	CDS	17477528	17477747	.	-	0	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 289 508 +
ChrX	stalkie_big_nohaplotig	CDS	17477816	17478103	.	-	0	Parent=FBgn0085437.1.mrna1;Target=FBgn0085437.1 1 288 +
ChrX	gffcl	locus	17465611	17465987	.	-	.	ID=RLOC_00001015;geneIDs=comp746223_c0_seq1.path1;transcripts=comp746223_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17465611	17465987	.	-	.	ID=comp746223_c0_seq1.mrna1;geneID=comp746223_c0_seq1.path1;Name=comp746223_c0_seq1;Dir=indeterminatecoverage=99.0;identity=100.0;matches=377;mismatches=0;indels=0;unknowns=0;Target=comp746223_c0_seq1 377 1 .;CDS_Target=comp746223_c0_seq1 290 180 .;locus=RLOC_00001015
ChrX	stalkie_big_nohaplotig	exon	17465611	17465987	100	-	.	Parent=comp746223_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17465698	17465808	.	-	0	Parent=comp746223_c0_seq1.mrna1
ChrX	gffcl	locus	17480941	17484974	.	-	.	ID=RLOC_00001016;geneIDs=FBgn0031590.1.path1;transcripts=FBgn0031590.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17480941	17484974	.	-	.	ID=FBgn0031590.1.mrna1;geneID=FBgn0031590.1.path1;Name=FBgn0031590.1;Dir=sensecoverage=100.0;identity=99.8;matches=1878;mismatches=3;indels=0;unknowns=0;locus=RLOC_00001016
ChrX	stalkie_big_nohaplotig	exon	17480941	17481906	99	-	.	Parent=FBgn0031590.1.mrna1;Target=FBgn0031590.1 916 1881 +
ChrX	stalkie_big_nohaplotig	exon	17484060	17484974	99	-	.	Parent=FBgn0031590.1.mrna1;Target=FBgn0031590.1 1 915 +
ChrX	stalkie_big_nohaplotig	CDS	17480941	17481906	.	-	0	Parent=FBgn0031590.1.mrna1;Target=FBgn0031590.1 916 1881 +
ChrX	stalkie_big_nohaplotig	CDS	17484060	17484974	.	-	0	Parent=FBgn0031590.1.mrna1;Target=FBgn0031590.1 1 915 +
ChrX	gffcl	locus	17482642	17483299	.	-	.	ID=RLOC_00001017;geneIDs=comp142465_c0_seq1.path1;transcripts=comp142465_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17482642	17483299	.	-	.	ID=comp142465_c0_seq1.mrna1;geneID=comp142465_c0_seq1.path1;Name=comp142465_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=657;mismatches=1;indels=0;unknowns=0;Target=comp142465_c0_seq1 658 1 .;CDS_Target=comp142465_c0_seq1 142 2 .;locus=RLOC_00001017
ChrX	stalkie_big_nohaplotig	exon	17482642	17483299	99	-	.	Parent=comp142465_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17483158	17483298	.	-	0	Parent=comp142465_c0_seq1.mrna1
ChrX	gffcl	locus	17487631	17489386	.	-	.	ID=RLOC_00001018;geneIDs=comp135975_c0_seq1.path1;transcripts=comp135975_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17487631	17489386	.	-	.	ID=comp135975_c0_seq1.mrna1;geneID=comp135975_c0_seq1.path1;Name=comp135975_c0_seq1;Dir=antisensecoverage=100.0;identity=99.2;matches=516;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001018
ChrX	stalkie_big_nohaplotig	exon	17487631	17488054	99	-	.	Parent=comp135975_c0_seq1.mrna1;Target=comp135975_c0_seq1 1 424 -
ChrX	stalkie_big_nohaplotig	exon	17489291	17489386	97	-	.	Parent=comp135975_c0_seq1.mrna1;Target=comp135975_c0_seq1 425 520 -
ChrX	stalkie_big_nohaplotig	CDS	17488035	17488054	.	-	2	Parent=comp135975_c0_seq1.mrna1;Target=comp135975_c0_seq1 405 424 .
ChrX	stalkie_big_nohaplotig	CDS	17489291	17489384	.	-	0	Parent=comp135975_c0_seq1.mrna1;Target=comp135975_c0_seq1 425 518 .
ChrX	gffcl	locus	17489363	17490426	.	+	.	ID=RLOC_00001019;geneIDs=FBgn0003941.1.path1,comp135604_c0_seq1.path1;transcripts=FBgn0003941.1.mrna1,comp135604_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17489363	17490426	.	+	.	ID=FBgn0003941.1.mrna1;geneID=FBgn0003941.1.path1;Name=FBgn0003941.1;Dir=sensecoverage=99.8;identity=98.9;matches=652;mismatches=6;indels=1;unknowns=0;locus=RLOC_00001019
ChrX	stalkie_big_nohaplotig	exon	17489363	17489623	98	+	.	Parent=FBgn0003941.1.mrna1;Target=FBgn0003941.1 2 263 +
ChrX	stalkie_big_nohaplotig	exon	17490030	17490426	99	+	.	Parent=FBgn0003941.1.mrna1;Target=FBgn0003941.1 264 660 +
ChrX	stalkie_big_nohaplotig	CDS	17489478	17489623	.	+	0	Parent=FBgn0003941.1.mrna1;Target=FBgn0003941.1 118 263 +
ChrX	stalkie_big_nohaplotig	CDS	17490030	17490426	.	+	1	Parent=FBgn0003941.1.mrna1;Target=FBgn0003941.1 264 660 +
ChrX	stalkie_big_nohaplotig	mRNA	17489622	17490052	.	+	.	ID=comp135604_c0_seq1.mrna1;geneID=comp135604_c0_seq1.path1;Name=comp135604_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=430;mismatches=1;indels=0;unknowns=0;Target=comp135604_c0_seq1 431 1 .;CDS_Target=comp135604_c0_seq1 172 92 .;locus=RLOC_00001019
ChrX	stalkie_big_nohaplotig	exon	17489622	17490052	99	+	.	Parent=comp135604_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17489713	17489793	.	+	0	Parent=comp135604_c0_seq1.mrna1
ChrX	gffcl	locus	17490483	17492284	.	-	.	ID=RLOC_00001020;geneIDs=comp153915_c0_seq1.path1;transcripts=comp153915_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17490483	17492284	.	-	.	ID=comp153915_c0_seq1.mrna1;geneID=comp153915_c0_seq1.path1;Name=comp153915_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=1781;mismatches=11;indels=19;unknowns=0;Target=comp153915_c0_seq1 1801 1 .;CDS_Target=comp153915_c0_seq1 1022 741 .;locus=RLOC_00001020
ChrX	stalkie_big_nohaplotig	exon	17490483	17492284	98	-	.	Parent=comp153915_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17491268	17491549	.	-	0	Parent=comp153915_c0_seq1.mrna1
ChrX	gffcl	locus	17503702	17504106	.	-	.	ID=RLOC_00001021;geneIDs=comp113165_c0_seq1.path1;transcripts=comp113165_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17503702	17504106	.	-	.	ID=comp113165_c0_seq1.mrna1;geneID=comp113165_c0_seq1.path1;Name=comp113165_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=405;mismatches=0;indels=0;unknowns=0;Target=comp113165_c0_seq1 405 1 .;CDS_Target=comp113165_c0_seq1 404 219 .;locus=RLOC_00001021
ChrX	stalkie_big_nohaplotig	exon	17503702	17504106	100	-	.	Parent=comp113165_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17503703	17503888	.	-	0	Parent=comp113165_c0_seq1.mrna1
ChrX	gffcl	locus	17504724	17505031	.	+	.	ID=RLOC_00001022;geneIDs=comp144319_c0_seq1.path1;transcripts=comp144319_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17504724	17505031	.	+	.	ID=comp144319_c0_seq1.mrna1;geneID=comp144319_c0_seq1.path1;Name=comp144319_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=308;mismatches=0;indels=0;unknowns=0;Target=comp144319_c0_seq1 308 1 .;CDS_Target=comp144319_c0_seq1 146 3 .;locus=RLOC_00001022
ChrX	stalkie_big_nohaplotig	exon	17504724	17505031	100	+	.	Parent=comp144319_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17504726	17504869	.	+	0	Parent=comp144319_c0_seq1.mrna1
ChrX	gffcl	locus	17505434	17506510	.	-	.	ID=RLOC_00001023;geneIDs=comp71589_c0_seq1.path1;transcripts=comp71589_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17505434	17506510	.	-	.	ID=comp71589_c0_seq1.mrna1;geneID=comp71589_c0_seq1.path1;Name=comp71589_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1072;mismatches=5;indels=0;unknowns=0;Target=comp71589_c0_seq1 1077 1 .;CDS_Target=comp71589_c0_seq1 1050 883 .;locus=RLOC_00001023
ChrX	stalkie_big_nohaplotig	exon	17505434	17506510	99	-	.	Parent=comp71589_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17505461	17505628	.	-	0	Parent=comp71589_c0_seq1.mrna1
ChrX	gffcl	locus	17507196	17508041	.	+	.	ID=RLOC_00001024;geneIDs=comp612794_c0_seq1.path1;transcripts=comp612794_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17507196	17508041	.	+	.	ID=comp612794_c0_seq1.mrna1;geneID=comp612794_c0_seq1.path1;Name=comp612794_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=837;mismatches=0;indels=9;unknowns=0;Target=comp612794_c0_seq1 837 1 .;CDS_Target=comp612794_c0_seq1 211 110 .;locus=RLOC_00001024
ChrX	stalkie_big_nohaplotig	exon	17507196	17508041	98	+	.	Parent=comp612794_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17507305	17507406	.	+	0	Parent=comp612794_c0_seq1.mrna1
ChrX	gffcl	locus	17508175	17718434	.	+	.	ID=RLOC_00001025;geneIDs=FBgn0020445.1.path1,comp156446_c0_seq1.path1;transcripts=comp156446_c0_seq1.mrna1,FBgn0020445.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17508175	17718434	.	+	.	ID=comp156446_c0_seq1.mrna1;geneID=comp156446_c0_seq1.path1;Name=comp156446_c0_seq1;Dir=indeterminatecoverage=81.3;identity=95.0;matches=796;mismatches=7;indels=35;unknowns=0;Target=comp156446_c0_seq1 224 84 .;locus=RLOC_00001025
ChrX	stalkie_big_nohaplotig	exon	17508175	17508799	99	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 626 2 .
ChrX	stalkie_big_nohaplotig	exon	17524576	17524581	100	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 671 666 .
ChrX	stalkie_big_nohaplotig	exon	17540915	17540918	100	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 675 672 .
ChrX	stalkie_big_nohaplotig	exon	17545436	17545443	20	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 715 676 .
ChrX	stalkie_big_nohaplotig	exon	17549512	17549514	100	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 718 716 .
ChrX	stalkie_big_nohaplotig	exon	17556482	17556491	100	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 728 719 .
ChrX	stalkie_big_nohaplotig	exon	17560563	17560567	100	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 733 729 .
ChrX	stalkie_big_nohaplotig	exon	17560749	17560754	100	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 739 734 .
ChrX	stalkie_big_nohaplotig	exon	17566050	17566055	100	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 745 740 .
ChrX	stalkie_big_nohaplotig	exon	17568012	17568020	100	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 754 746 .
ChrX	stalkie_big_nohaplotig	exon	17585435	17585441	100	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 761 755 .
ChrX	stalkie_big_nohaplotig	exon	17585472	17585473	100	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 817 816 .
ChrX	stalkie_big_nohaplotig	exon	17590862	17590863	100	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 819 818 .
ChrX	stalkie_big_nohaplotig	exon	17595475	17595478	100	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 823 820 .
ChrX	stalkie_big_nohaplotig	exon	17597885	17597891	100	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 830 824 .
ChrX	stalkie_big_nohaplotig	exon	17600084	17600091	100	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 838 831 .
ChrX	stalkie_big_nohaplotig	exon	17600118	17600120	100	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 888 886 .
ChrX	stalkie_big_nohaplotig	exon	17607953	17607956	100	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 892 889 .
ChrX	stalkie_big_nohaplotig	exon	17611969	17611980	91	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 904 893 .
ChrX	stalkie_big_nohaplotig	exon	17636261	17636274	85	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 918 905 .
ChrX	stalkie_big_nohaplotig	exon	17644270	17644279	100	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 928 919 .
ChrX	stalkie_big_nohaplotig	exon	17694759	17694765	100	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 953 947 .
ChrX	stalkie_big_nohaplotig	exon	17696419	17696435	75	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 973 954 .
ChrX	stalkie_big_nohaplotig	exon	17699892	17699901	90	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 983 974 .
ChrX	stalkie_big_nohaplotig	exon	17707893	17707896	100	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 987 984 .
ChrX	stalkie_big_nohaplotig	exon	17718427	17718434	100	+	.	Parent=comp156446_c0_seq1.mrna1;Target=comp156446_c0_seq1 995 988 .
ChrX	stalkie_big_nohaplotig	CDS	17508257	17508397	.	+	0	Parent=comp156446_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17512189	17563172	.	+	.	ID=FBgn0020445.1.mrna1;geneID=FBgn0020445.1.path1;Name=FBgn0020445.1;Dir=sensecoverage=100.0;identity=99.5;matches=2444;mismatches=1;indels=12;unknowns=0;locus=RLOC_00001025
ChrX	stalkie_big_nohaplotig	exon	17512189	17512490	96	+	.	Parent=FBgn0020445.1.mrna1;Target=FBgn0020445.1 1 302 +
ChrX	stalkie_big_nohaplotig	exon	17559359	17559487	100	+	.	Parent=FBgn0020445.1.mrna1;Target=FBgn0020445.1 303 431 +
ChrX	stalkie_big_nohaplotig	exon	17559554	17559965	100	+	.	Parent=FBgn0020445.1.mrna1;Target=FBgn0020445.1 432 843 +
ChrX	stalkie_big_nohaplotig	exon	17560210	17560465	100	+	.	Parent=FBgn0020445.1.mrna1;Target=FBgn0020445.1 844 1099 +
ChrX	stalkie_big_nohaplotig	exon	17560594	17561331	99	+	.	Parent=FBgn0020445.1.mrna1;Target=FBgn0020445.1 1100 1837 +
ChrX	stalkie_big_nohaplotig	exon	17561674	17561830	100	+	.	Parent=FBgn0020445.1.mrna1;Target=FBgn0020445.1 1838 1994 +
ChrX	stalkie_big_nohaplotig	exon	17561892	17562158	100	+	.	Parent=FBgn0020445.1.mrna1;Target=FBgn0020445.1 1995 2261 +
ChrX	stalkie_big_nohaplotig	exon	17562983	17563172	100	+	.	Parent=FBgn0020445.1.mrna1;Target=FBgn0020445.1 2262 2451 +
ChrX	stalkie_big_nohaplotig	CDS	17512189	17512490	.	+	0	Parent=FBgn0020445.1.mrna1;Target=FBgn0020445.1 1 302 +
ChrX	stalkie_big_nohaplotig	CDS	17559359	17559487	.	+	1	Parent=FBgn0020445.1.mrna1;Target=FBgn0020445.1 303 431 +
ChrX	stalkie_big_nohaplotig	CDS	17559554	17559965	.	+	1	Parent=FBgn0020445.1.mrna1;Target=FBgn0020445.1 432 843 +
ChrX	stalkie_big_nohaplotig	CDS	17560210	17560465	.	+	0	Parent=FBgn0020445.1.mrna1;Target=FBgn0020445.1 844 1099 +
ChrX	stalkie_big_nohaplotig	CDS	17560594	17561331	.	+	2	Parent=FBgn0020445.1.mrna1;Target=FBgn0020445.1 1100 1837 +
ChrX	stalkie_big_nohaplotig	CDS	17561674	17561830	.	+	2	Parent=FBgn0020445.1.mrna1;Target=FBgn0020445.1 1838 1994 +
ChrX	stalkie_big_nohaplotig	CDS	17561892	17562158	.	+	1	Parent=FBgn0020445.1.mrna1;Target=FBgn0020445.1 1995 2261 +
ChrX	stalkie_big_nohaplotig	CDS	17562983	17563172	.	+	1	Parent=FBgn0020445.1.mrna1;Target=FBgn0020445.1 2262 2451 +
ChrX	gffcl	locus	17510979	17511196	.	-	.	ID=RLOC_00001026;geneIDs=comp204908_c0_seq1.path1;transcripts=comp204908_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17510979	17511196	.	-	.	ID=comp204908_c0_seq1.mrna1;geneID=comp204908_c0_seq1.path1;Name=comp204908_c0_seq1;Dir=indeterminatecoverage=89.0;identity=99.5;matches=217;mismatches=1;indels=0;unknowns=0;Target=comp204908_c0_seq1 218 1 .;CDS_Target=comp204908_c0_seq1 134 3 .;locus=RLOC_00001026
ChrX	stalkie_big_nohaplotig	exon	17510979	17511196	99	-	.	Parent=comp204908_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17511063	17511194	.	-	0	Parent=comp204908_c0_seq1.mrna1
ChrX	gffcl	locus	17511225	17512070	.	+	.	ID=RLOC_00001027;geneIDs=comp54936_c0_seq1.path1,comp189215_c0_seq1.path1;transcripts=comp54936_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17511572	17512070	.	+	.	ID=comp54936_c0_seq1.mrna1;geneID=comp54936_c0_seq1.path1;Name=comp54936_c0_seq1;Dir=indeterminatecoverage=98.6;identity=100.0;matches=499;mismatches=0;indels=0;unknowns=0;Target=comp54936_c0_seq1 499 1 .;CDS_Target=comp54936_c0_seq1 497 3 .;locus=RLOC_00001027
ChrX	stalkie_big_nohaplotig	exon	17511572	17512070	100	+	.	Parent=comp54936_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17511574	17512068	.	+	0	Parent=comp54936_c0_seq1.mrna1
ChrX	gffcl	locus	17518376	19354524	.	-	.	ID=RLOC_00001028;geneIDs=comp150699_c0_seq1.path1;transcripts=comp150699_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17518376	19354524	.	-	.	ID=comp150699_c0_seq1.mrna1;geneID=comp150699_c0_seq1.path1;Name=comp150699_c0_seq1;Dir=indeterminatecoverage=82.7;identity=99.1;matches=466;mismatches=4;indels=0;unknowns=0;Target=comp150699_c0_seq1 220 2 .;locus=RLOC_00001028
ChrX	stalkie_big_nohaplotig	exon	17518376	17518381	100	-	.	Parent=comp150699_c0_seq1.mrna1;Target=comp150699_c0_seq1 470 465 .
ChrX	stalkie_big_nohaplotig	exon	19354061	19354524	99	-	.	Parent=comp150699_c0_seq1.mrna1;Target=comp150699_c0_seq1 464 1 .
ChrX	stalkie_big_nohaplotig	CDS	19354305	19354523	.	-	0	Parent=comp150699_c0_seq1.mrna1
ChrX	gffcl	locus	17543289	17844560	.	.	.	ID=RLOC_00001029;geneIDs=FBgn0028482.1.path1,comp150578_c0_seq1.path1;transcripts=FBgn0028482.1.mrna1,comp150578_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17543289	17844560	.	+	.	ID=FBgn0028482.1.mrna1;geneID=FBgn0028482.1.path1;Name=FBgn0028482.1;Dir=sensecoverage=96.0;identity=100.0;matches=1970;mismatches=0;indels=0;unknowns=1;locus=RLOC_00001029
ChrX	stalkie_big_nohaplotig	exon	17543289	17543295	100	+	.	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 89 95 +
ChrX	stalkie_big_nohaplotig	exon	17549246	17549247	100	+	.	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 96 97 +
ChrX	stalkie_big_nohaplotig	exon	17781558	17781566	100	+	.	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 213 221 +
ChrX	stalkie_big_nohaplotig	exon	17788930	17788937	100	+	.	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 229 236 +
ChrX	stalkie_big_nohaplotig	exon	17791345	17791352	100	+	.	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 238 245 +
ChrX	stalkie_big_nohaplotig	exon	17806711	17806717	100	+	.	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 246 252 +
ChrX	stalkie_big_nohaplotig	exon	17812568	17812575	100	+	.	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 253 260 +
ChrX	stalkie_big_nohaplotig	exon	17816748	17816751	100	+	.	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 261 264 +
ChrX	stalkie_big_nohaplotig	exon	17829948	17830170	100	+	.	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 265 487 +
ChrX	stalkie_big_nohaplotig	exon	17830410	17830694	100	+	.	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 488 772 +
ChrX	stalkie_big_nohaplotig	exon	17831026	17831174	100	+	.	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 773 921 +
ChrX	stalkie_big_nohaplotig	exon	17831370	17831630	100	+	.	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 922 1182 +
ChrX	stalkie_big_nohaplotig	exon	17834334	17834562	100	+	.	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 1183 1411 +
ChrX	stalkie_big_nohaplotig	exon	17842137	17842172	100	+	.	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 1412 1447 +
ChrX	stalkie_big_nohaplotig	exon	17842640	17842846	100	+	.	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 1448 1654 +
ChrX	stalkie_big_nohaplotig	exon	17844034	17844560	100	+	.	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 1655 2181 +
ChrX	stalkie_big_nohaplotig	CDS	17830451	17830694	.	+	0	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 529 772 +
ChrX	stalkie_big_nohaplotig	CDS	17831026	17831174	.	+	2	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 773 921 +
ChrX	stalkie_big_nohaplotig	CDS	17831370	17831630	.	+	0	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 922 1182 +
ChrX	stalkie_big_nohaplotig	CDS	17834334	17834562	.	+	0	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 1183 1411 +
ChrX	stalkie_big_nohaplotig	CDS	17842137	17842172	.	+	2	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 1412 1447 +
ChrX	stalkie_big_nohaplotig	CDS	17842640	17842846	.	+	2	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 1448 1654 +
ChrX	stalkie_big_nohaplotig	CDS	17844034	17844560	.	+	2	Parent=FBgn0028482.1.mrna1;Target=FBgn0028482.1 1655 2181 +
ChrX	stalkie_big_nohaplotig	mRNA	17791200	17791974	.	-	.	ID=comp150578_c0_seq1.mrna1;geneID=comp150578_c0_seq1.path1;Name=comp150578_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=770;mismatches=5;indels=9;unknowns=0;Target=comp150578_c0_seq1 784 1 .;CDS_Target=comp150578_c0_seq1 166 92 .;locus=RLOC_00001029
ChrX	stalkie_big_nohaplotig	exon	17791200	17791974	98	-	.	Parent=comp150578_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17791816	17791890	.	-	0	Parent=comp150578_c0_seq1.mrna1
ChrX	gffcl	locus	17576934	17578196	.	-	.	ID=RLOC_00001031;geneIDs=comp156199_c0_seq1.path1;transcripts=comp156199_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17576934	17578196	.	-	.	ID=comp156199_c0_seq1.mrna1;geneID=comp156199_c0_seq1.path1;Name=comp156199_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1258;mismatches=5;indels=1;unknowns=0;Target=comp156199_c0_seq1 1264 1 .;CDS_Target=comp156199_c0_seq1 130 2 .;locus=RLOC_00001031
ChrX	stalkie_big_nohaplotig	exon	17576934	17578196	99	-	.	Parent=comp156199_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17578067	17578195	.	-	0	Parent=comp156199_c0_seq1.mrna1
ChrX	gffcl	locus	17603027	17605190	.	+	.	ID=RLOC_00001032;geneIDs=FBgn0026787.1.path1;transcripts=FBgn0026787.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17603027	17605190	.	+	.	ID=FBgn0026787.1.mrna1;geneID=FBgn0026787.1.path1;Name=FBgn0026787.1;Dir=sensecoverage=100.0;identity=100.0;matches=1995;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001032
ChrX	stalkie_big_nohaplotig	exon	17603027	17603742	100	+	.	Parent=FBgn0026787.1.mrna1;Target=FBgn0026787.1 1 716 +
ChrX	stalkie_big_nohaplotig	exon	17603912	17605190	100	+	.	Parent=FBgn0026787.1.mrna1;Target=FBgn0026787.1 717 1995 +
ChrX	stalkie_big_nohaplotig	CDS	17603027	17603742	.	+	0	Parent=FBgn0026787.1.mrna1;Target=FBgn0026787.1 1 716 +
ChrX	stalkie_big_nohaplotig	CDS	17603912	17605190	.	+	1	Parent=FBgn0026787.1.mrna1;Target=FBgn0026787.1 717 1995 +
ChrX	gffcl	locus	17609540	17614251	.	-	.	ID=RLOC_00001033;geneIDs=FBgn0031217.1.path1,comp152166_c0_seq1.path1;transcripts=comp152166_c0_seq1.mrna1,FBgn0031217.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17609540	17614251	.	-	.	ID=comp152166_c0_seq1.mrna1;geneID=comp152166_c0_seq1.path1;Name=comp152166_c0_seq1;Dir=sensecoverage=99.7;identity=99.8;matches=2248;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001033
ChrX	stalkie_big_nohaplotig	exon	17609540	17610512	99	-	.	Parent=comp152166_c0_seq1.mrna1;Target=comp152166_c0_seq1 1285 2257 +
ChrX	stalkie_big_nohaplotig	exon	17612752	17612985	100	-	.	Parent=comp152166_c0_seq1.mrna1;Target=comp152166_c0_seq1 1051 1284 +
ChrX	stalkie_big_nohaplotig	exon	17613053	17613244	100	-	.	Parent=comp152166_c0_seq1.mrna1;Target=comp152166_c0_seq1 859 1050 +
ChrX	stalkie_big_nohaplotig	exon	17613317	17613635	100	-	.	Parent=comp152166_c0_seq1.mrna1;Target=comp152166_c0_seq1 540 858 +
ChrX	stalkie_big_nohaplotig	exon	17613718	17614251	99	-	.	Parent=comp152166_c0_seq1.mrna1;Target=comp152166_c0_seq1 6 539 +
ChrX	stalkie_big_nohaplotig	CDS	17610382	17610512	.	-	2	Parent=comp152166_c0_seq1.mrna1;Target=comp152166_c0_seq1 1285 1415 +
ChrX	stalkie_big_nohaplotig	CDS	17612752	17612985	.	-	2	Parent=comp152166_c0_seq1.mrna1;Target=comp152166_c0_seq1 1051 1284 +
ChrX	stalkie_big_nohaplotig	CDS	17613053	17613244	.	-	2	Parent=comp152166_c0_seq1.mrna1;Target=comp152166_c0_seq1 859 1050 +
ChrX	stalkie_big_nohaplotig	CDS	17613317	17613635	.	-	0	Parent=comp152166_c0_seq1.mrna1;Target=comp152166_c0_seq1 540 858 +
ChrX	stalkie_big_nohaplotig	CDS	17613718	17613882	.	-	0	Parent=comp152166_c0_seq1.mrna1;Target=comp152166_c0_seq1 375 539 +
ChrX	stalkie_big_nohaplotig	mRNA	17610947	17613906	.	-	.	ID=FBgn0031217.1.mrna1;geneID=FBgn0031217.1.path1;Name=FBgn0031217.1;Dir=sensecoverage=100.0;identity=100.0;matches=1173;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001033
ChrX	stalkie_big_nohaplotig	exon	17610947	17611185	100	-	.	Parent=FBgn0031217.1.mrna1;Target=FBgn0031217.1 935 1173 +
ChrX	stalkie_big_nohaplotig	exon	17612752	17612985	100	-	.	Parent=FBgn0031217.1.mrna1;Target=FBgn0031217.1 701 934 +
ChrX	stalkie_big_nohaplotig	exon	17613053	17613244	100	-	.	Parent=FBgn0031217.1.mrna1;Target=FBgn0031217.1 509 700 +
ChrX	stalkie_big_nohaplotig	exon	17613317	17613635	100	-	.	Parent=FBgn0031217.1.mrna1;Target=FBgn0031217.1 190 508 +
ChrX	stalkie_big_nohaplotig	exon	17613718	17613906	100	-	.	Parent=FBgn0031217.1.mrna1;Target=FBgn0031217.1 1 189 +
ChrX	stalkie_big_nohaplotig	CDS	17610947	17611185	.	-	2	Parent=FBgn0031217.1.mrna1;Target=FBgn0031217.1 935 1173 +
ChrX	stalkie_big_nohaplotig	CDS	17612752	17612985	.	-	2	Parent=FBgn0031217.1.mrna1;Target=FBgn0031217.1 701 934 +
ChrX	stalkie_big_nohaplotig	CDS	17613053	17613244	.	-	2	Parent=FBgn0031217.1.mrna1;Target=FBgn0031217.1 509 700 +
ChrX	stalkie_big_nohaplotig	CDS	17613317	17613635	.	-	0	Parent=FBgn0031217.1.mrna1;Target=FBgn0031217.1 190 508 +
ChrX	stalkie_big_nohaplotig	CDS	17613718	17613906	.	-	0	Parent=FBgn0031217.1.mrna1;Target=FBgn0031217.1 1 189 +
ChrX	gffcl	locus	17624696	17642694	.	-	.	ID=RLOC_00001034;geneIDs=comp144041_c0_seq1.path1;transcripts=comp144041_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17624696	17642694	.	-	.	ID=comp144041_c0_seq1.mrna1;geneID=comp144041_c0_seq1.path1;Name=comp144041_c0_seq1;Dir=indeterminatecoverage=47.5;identity=99.5;matches=190;mismatches=1;indels=0;unknowns=0;Target=comp144041_c0_seq1 238 229 .;locus=RLOC_00001034
ChrX	stalkie_big_nohaplotig	exon	17624696	17624865	100	-	.	Parent=comp144041_c0_seq1.mrna1;Target=comp144041_c0_seq1 443 274 .
ChrX	stalkie_big_nohaplotig	exon	17626035	17626036	100	-	.	Parent=comp144041_c0_seq1.mrna1;Target=comp144041_c0_seq1 273 272 .
ChrX	stalkie_big_nohaplotig	exon	17633188	17633195	87	-	.	Parent=comp144041_c0_seq1.mrna1;Target=comp144041_c0_seq1 271 264 .
ChrX	stalkie_big_nohaplotig	exon	17642685	17642694	100	-	.	Parent=comp144041_c0_seq1.mrna1;Target=comp144041_c0_seq1 238 229 .
ChrX	stalkie_big_nohaplotig	CDS	17642685	17642694	.	-	0	Parent=comp144041_c0_seq1.mrna1
ChrX	gffcl	locus	17626784	17633798	.	-	.	ID=RLOC_00001035;geneIDs=FBgn0031220.1.path1,comp151811_c0_seq1.path1;transcripts=FBgn0031220.1.mrna1,comp151811_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17626784	17633798	.	-	.	ID=FBgn0031220.1.mrna1;geneID=FBgn0031220.1.path1;Name=FBgn0031220.1;Dir=sensecoverage=100.0;identity=99.8;matches=2066;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001035
ChrX	stalkie_big_nohaplotig	exon	17626784	17627212	100	-	.	Parent=FBgn0031220.1.mrna1;Target=FBgn0031220.1 1642 2070 +
ChrX	stalkie_big_nohaplotig	exon	17627283	17627539	100	-	.	Parent=FBgn0031220.1.mrna1;Target=FBgn0031220.1 1385 1641 +
ChrX	stalkie_big_nohaplotig	exon	17628248	17628416	99	-	.	Parent=FBgn0031220.1.mrna1;Target=FBgn0031220.1 1216 1384 +
ChrX	stalkie_big_nohaplotig	exon	17629519	17629808	100	-	.	Parent=FBgn0031220.1.mrna1;Target=FBgn0031220.1 926 1215 +
ChrX	stalkie_big_nohaplotig	exon	17629867	17630105	100	-	.	Parent=FBgn0031220.1.mrna1;Target=FBgn0031220.1 687 925 +
ChrX	stalkie_big_nohaplotig	exon	17630161	17630306	100	-	.	Parent=FBgn0031220.1.mrna1;Target=FBgn0031220.1 541 686 +
ChrX	stalkie_big_nohaplotig	exon	17630370	17630680	99	-	.	Parent=FBgn0031220.1.mrna1;Target=FBgn0031220.1 230 540 +
ChrX	stalkie_big_nohaplotig	exon	17633570	17633798	99	-	.	Parent=FBgn0031220.1.mrna1;Target=FBgn0031220.1 1 229 +
ChrX	stalkie_big_nohaplotig	CDS	17626784	17627212	.	-	0	Parent=FBgn0031220.1.mrna1;Target=FBgn0031220.1 1642 2070 +
ChrX	stalkie_big_nohaplotig	CDS	17627283	17627539	.	-	2	Parent=FBgn0031220.1.mrna1;Target=FBgn0031220.1 1385 1641 +
ChrX	stalkie_big_nohaplotig	CDS	17628248	17628416	.	-	0	Parent=FBgn0031220.1.mrna1;Target=FBgn0031220.1 1216 1384 +
ChrX	stalkie_big_nohaplotig	CDS	17629519	17629808	.	-	2	Parent=FBgn0031220.1.mrna1;Target=FBgn0031220.1 926 1215 +
ChrX	stalkie_big_nohaplotig	CDS	17629867	17630105	.	-	1	Parent=FBgn0031220.1.mrna1;Target=FBgn0031220.1 687 925 +
ChrX	stalkie_big_nohaplotig	CDS	17630161	17630306	.	-	0	Parent=FBgn0031220.1.mrna1;Target=FBgn0031220.1 541 686 +
ChrX	stalkie_big_nohaplotig	CDS	17630370	17630680	.	-	2	Parent=FBgn0031220.1.mrna1;Target=FBgn0031220.1 230 540 +
ChrX	stalkie_big_nohaplotig	CDS	17633570	17633798	.	-	0	Parent=FBgn0031220.1.mrna1;Target=FBgn0031220.1 1 229 +
ChrX	stalkie_big_nohaplotig	mRNA	17628396	17629117	.	-	.	ID=comp151811_c0_seq1.mrna1;geneID=comp151811_c0_seq1.path1;Name=comp151811_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.5;matches=697;mismatches=5;indels=20;unknowns=0;Target=comp151811_c0_seq1 702 1 .;CDS_Target=comp151811_c0_seq1 183 46 .;locus=RLOC_00001035
ChrX	stalkie_big_nohaplotig	exon	17628396	17629117	96	-	.	Parent=comp151811_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17628915	17629052	.	-	0	Parent=comp151811_c0_seq1.mrna1
ChrX	gffcl	locus	17646525	17647103	.	+	.	ID=RLOC_00001036;geneIDs=comp139656_c1_seq1.path1;transcripts=comp139656_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17646525	17647103	.	+	.	ID=comp139656_c1_seq1.mrna1;geneID=comp139656_c1_seq1.path1;Name=comp139656_c1_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=428;mismatches=2;indels=1;unknowns=0;locus=RLOC_00001036
ChrX	stalkie_big_nohaplotig	exon	17646525	17646833	99	+	.	Parent=comp139656_c1_seq1.mrna1;Target=comp139656_c1_seq1 123 430 -
ChrX	stalkie_big_nohaplotig	exon	17646982	17647103	98	+	.	Parent=comp139656_c1_seq1.mrna1;Target=comp139656_c1_seq1 1 122 -
ChrX	stalkie_big_nohaplotig	CDS	17646779	17646833	.	+	0	Parent=comp139656_c1_seq1.mrna1;Target=comp139656_c1_seq1 123 177 .
ChrX	stalkie_big_nohaplotig	CDS	17646982	17647010	.	+	2	Parent=comp139656_c1_seq1.mrna1;Target=comp139656_c1_seq1 94 122 .
ChrX	gffcl	locus	17675693	17704400	.	-	.	ID=RLOC_00001037;geneIDs=FBgn0025683.1.path1;transcripts=FBgn0025683.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17675693	17704400	.	-	.	ID=FBgn0025683.1.mrna1;geneID=FBgn0025683.1.path1;Name=FBgn0025683.1;Dir=sensecoverage=100.0;identity=100.0;matches=2147;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001037
ChrX	stalkie_big_nohaplotig	exon	17675693	17676190	100	-	.	Parent=FBgn0025683.1.mrna1;Target=FBgn0025683.1 1651 2148 +
ChrX	stalkie_big_nohaplotig	exon	17676254	17676354	100	-	.	Parent=FBgn0025683.1.mrna1;Target=FBgn0025683.1 1550 1650 +
ChrX	stalkie_big_nohaplotig	exon	17678717	17678885	100	-	.	Parent=FBgn0025683.1.mrna1;Target=FBgn0025683.1 1381 1549 +
ChrX	stalkie_big_nohaplotig	exon	17678952	17679773	100	-	.	Parent=FBgn0025683.1.mrna1;Target=FBgn0025683.1 559 1380 +
ChrX	stalkie_big_nohaplotig	exon	17682566	17682755	100	-	.	Parent=FBgn0025683.1.mrna1;Target=FBgn0025683.1 369 558 +
ChrX	stalkie_big_nohaplotig	exon	17689577	17689694	99	-	.	Parent=FBgn0025683.1.mrna1;Target=FBgn0025683.1 251 368 +
ChrX	stalkie_big_nohaplotig	exon	17704151	17704400	100	-	.	Parent=FBgn0025683.1.mrna1;Target=FBgn0025683.1 1 250 +
ChrX	stalkie_big_nohaplotig	CDS	17675693	17676190	.	-	0	Parent=FBgn0025683.1.mrna1;Target=FBgn0025683.1 1651 2148 +
ChrX	stalkie_big_nohaplotig	CDS	17676254	17676354	.	-	2	Parent=FBgn0025683.1.mrna1;Target=FBgn0025683.1 1550 1650 +
ChrX	stalkie_big_nohaplotig	CDS	17678717	17678885	.	-	0	Parent=FBgn0025683.1.mrna1;Target=FBgn0025683.1 1381 1549 +
ChrX	stalkie_big_nohaplotig	CDS	17678952	17679773	.	-	0	Parent=FBgn0025683.1.mrna1;Target=FBgn0025683.1 559 1380 +
ChrX	stalkie_big_nohaplotig	CDS	17682566	17682755	.	-	1	Parent=FBgn0025683.1.mrna1;Target=FBgn0025683.1 369 558 +
ChrX	stalkie_big_nohaplotig	CDS	17689577	17689694	.	-	2	Parent=FBgn0025683.1.mrna1;Target=FBgn0025683.1 251 368 +
ChrX	stalkie_big_nohaplotig	CDS	17704151	17704400	.	-	0	Parent=FBgn0025683.1.mrna1;Target=FBgn0025683.1 1 250 +
ChrX	gffcl	locus	17677514	17677851	.	-	.	ID=RLOC_00001038;geneIDs=comp140719_c0_seq1.path1;transcripts=comp140719_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17677514	17677851	.	-	.	ID=comp140719_c0_seq1.mrna1;geneID=comp140719_c0_seq1.path1;Name=comp140719_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=338;mismatches=0;indels=0;unknowns=0;Target=comp140719_c0_seq1 338 1 .;CDS_Target=comp140719_c0_seq1 177 19 .;locus=RLOC_00001038
ChrX	stalkie_big_nohaplotig	exon	17677514	17677851	100	-	.	Parent=comp140719_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17677675	17677833	.	-	0	Parent=comp140719_c0_seq1.mrna1
ChrX	gffcl	locus	17705076	17714598	.	+	.	ID=RLOC_00001039;geneIDs=comp135745_c0_seq1.path1;transcripts=comp135745_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17705076	17714598	.	+	.	ID=comp135745_c0_seq1.mrna1;geneID=comp135745_c0_seq1.path1;Name=comp135745_c0_seq1;Dir=indeterminatecoverage=99.1;identity=96.2;matches=757;mismatches=6;indels=24;unknowns=0;Target=comp135745_c0_seq1 279 127 .;locus=RLOC_00001039
ChrX	stalkie_big_nohaplotig	exon	17705076	17705498	100	+	.	Parent=comp135745_c0_seq1.mrna1;Target=comp135745_c0_seq1 430 8 .
ChrX	stalkie_big_nohaplotig	exon	17709006	17709007	100	+	.	Parent=comp135745_c0_seq1.mrna1;Target=comp135745_c0_seq1 432 431 .
ChrX	stalkie_big_nohaplotig	exon	17714261	17714598	91	+	.	Parent=comp135745_c0_seq1.mrna1;Target=comp135745_c0_seq1 794 433 .
ChrX	stalkie_big_nohaplotig	CDS	17705195	17705347	.	+	0	Parent=comp135745_c0_seq1.mrna1
ChrX	gffcl	locus	17728239	17729393	.	-	.	ID=RLOC_00001040;geneIDs=comp145208_c0_seq1.path1;transcripts=comp145208_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17728239	17729393	.	-	.	ID=comp145208_c0_seq1.mrna1;geneID=comp145208_c0_seq1.path1;Name=comp145208_c0_seq1;Dir=sensecoverage=96.7;identity=99.5;matches=651;mismatches=2;indels=1;unknowns=0;Target=comp145208_c0_seq1 153 359 +;locus=RLOC_00001040
ChrX	stalkie_big_nohaplotig	exon	17728239	17728322	100	-	.	Parent=comp145208_c0_seq1.mrna1;Target=comp145208_c0_seq1 570 653 +
ChrX	stalkie_big_nohaplotig	exon	17728824	17729393	99	-	.	Parent=comp145208_c0_seq1.mrna1;Target=comp145208_c0_seq1 1 569 +
ChrX	stalkie_big_nohaplotig	CDS	17729034	17729240	.	-	0	Parent=comp145208_c0_seq1.mrna1
ChrX	gffcl	locus	17733381	17733756	.	-	.	ID=RLOC_00001041;geneIDs=comp175236_c0_seq1.path1;transcripts=comp175236_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17733381	17733756	.	-	.	ID=comp175236_c0_seq1.mrna1;geneID=comp175236_c0_seq1.path1;Name=comp175236_c0_seq1;Dir=indeterminatecoverage=93.1;identity=99.7;matches=375;mismatches=1;indels=0;unknowns=0;Target=comp175236_c0_seq1 387 12 .;CDS_Target=comp175236_c0_seq1 141 49 .;locus=RLOC_00001041
ChrX	stalkie_big_nohaplotig	exon	17733381	17733756	99	-	.	Parent=comp175236_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17733627	17733719	.	-	0	Parent=comp175236_c0_seq1.mrna1
ChrX	gffcl	locus	17734285	17772794	.	-	.	ID=RLOC_00001042;geneIDs=FBgn0020762.1.path1;transcripts=FBgn0020762.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17734285	17772794	.	-	.	ID=FBgn0020762.1.mrna1;geneID=FBgn0020762.1.path1;Name=FBgn0020762.1;Dir=sensecoverage=100.0;identity=99.8;matches=2516;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001042
ChrX	stalkie_big_nohaplotig	exon	17734285	17734493	100	-	.	Parent=FBgn0020762.1.mrna1;Target=FBgn0020762.1 2312 2520 +
ChrX	stalkie_big_nohaplotig	exon	17734563	17734851	99	-	.	Parent=FBgn0020762.1.mrna1;Target=FBgn0020762.1 2023 2311 +
ChrX	stalkie_big_nohaplotig	exon	17734916	17735016	100	-	.	Parent=FBgn0020762.1.mrna1;Target=FBgn0020762.1 1922 2022 +
ChrX	stalkie_big_nohaplotig	exon	17735072	17736405	99	-	.	Parent=FBgn0020762.1.mrna1;Target=FBgn0020762.1 588 1921 +
ChrX	stalkie_big_nohaplotig	exon	17737163	17737468	100	-	.	Parent=FBgn0020762.1.mrna1;Target=FBgn0020762.1 282 587 +
ChrX	stalkie_big_nohaplotig	exon	17772514	17772794	100	-	.	Parent=FBgn0020762.1.mrna1;Target=FBgn0020762.1 1 281 +
ChrX	stalkie_big_nohaplotig	CDS	17734285	17734493	.	-	2	Parent=FBgn0020762.1.mrna1;Target=FBgn0020762.1 2312 2520 +
ChrX	stalkie_big_nohaplotig	CDS	17734563	17734851	.	-	0	Parent=FBgn0020762.1.mrna1;Target=FBgn0020762.1 2023 2311 +
ChrX	stalkie_big_nohaplotig	CDS	17734916	17735016	.	-	2	Parent=FBgn0020762.1.mrna1;Target=FBgn0020762.1 1922 2022 +
ChrX	stalkie_big_nohaplotig	CDS	17735072	17736405	.	-	1	Parent=FBgn0020762.1.mrna1;Target=FBgn0020762.1 588 1921 +
ChrX	stalkie_big_nohaplotig	CDS	17737163	17737468	.	-	1	Parent=FBgn0020762.1.mrna1;Target=FBgn0020762.1 282 587 +
ChrX	stalkie_big_nohaplotig	CDS	17772514	17772794	.	-	0	Parent=FBgn0020762.1.mrna1;Target=FBgn0020762.1 1 281 +
ChrX	gffcl	locus	17750389	17751112	.	-	.	ID=RLOC_00001043;geneIDs=comp138807_c0_seq1.path1;transcripts=comp138807_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17750389	17751112	.	-	.	ID=comp138807_c0_seq1.mrna1;geneID=comp138807_c0_seq1.path1;Name=comp138807_c0_seq1;Dir=indeterminatecoverage=98.0;identity=100.0;matches=724;mismatches=0;indels=0;unknowns=0;Target=comp138807_c0_seq1 725 2 .;CDS_Target=comp138807_c0_seq1 598 218 .;locus=RLOC_00001043
ChrX	stalkie_big_nohaplotig	exon	17750389	17751112	100	-	.	Parent=comp138807_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17750516	17750896	.	-	0	Parent=comp138807_c0_seq1.mrna1
ChrX	gffcl	locus	17753067	17753931	.	-	.	ID=RLOC_00001044;geneIDs=comp143200_c1_seq1.path1;transcripts=comp143200_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17753067	17753931	.	-	.	ID=comp143200_c1_seq1.mrna1;geneID=comp143200_c1_seq1.path1;Name=comp143200_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=864;mismatches=1;indels=0;unknowns=0;Target=comp143200_c1_seq1 865 1 .;CDS_Target=comp143200_c1_seq1 493 338 .;locus=RLOC_00001044
ChrX	stalkie_big_nohaplotig	exon	17753067	17753931	99	-	.	Parent=comp143200_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17753439	17753594	.	-	0	Parent=comp143200_c1_seq1.mrna1
ChrX	gffcl	locus	17759093	17796437	.	.	.	ID=RLOC_00001045;geneIDs=comp147213_c0_seq1.path1,comp147213_c0_seq1.path2;transcripts=comp147213_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	17759093	17796437	.	+	.	ID=comp147213_c0_seq1.mrna2;geneID=comp147213_c0_seq1.path2;Name=comp147213_c0_seq1;Dir=indeterminatecoverage=68.2;identity=88.3;matches=546;mismatches=33;indels=39;unknowns=0;Target=comp147213_c0_seq1 695 510 .;locus=RLOC_00001045
ChrX	stalkie_big_nohaplotig	exon	17759093	17759096	100	+	.	Parent=comp147213_c0_seq1.mrna2;Target=comp147213_c0_seq1 287 284 .
ChrX	stalkie_big_nohaplotig	exon	17761044	17761059	88	+	.	Parent=comp147213_c0_seq1.mrna2;Target=comp147213_c0_seq1 304 288 .
ChrX	stalkie_big_nohaplotig	exon	17767454	17767471	47	+	.	Parent=comp147213_c0_seq1.mrna2;Target=comp147213_c0_seq1 338 305 .
ChrX	stalkie_big_nohaplotig	exon	17781611	17781679	55	+	.	Parent=comp147213_c0_seq1.mrna2;Target=comp147213_c0_seq1 413 344 .
ChrX	stalkie_big_nohaplotig	exon	17785638	17785670	69	+	.	Parent=comp147213_c0_seq1.mrna2;Target=comp147213_c0_seq1 445 414 .
ChrX	stalkie_big_nohaplotig	exon	17793762	17793768	100	+	.	Parent=comp147213_c0_seq1.mrna2;Target=comp147213_c0_seq1 452 446 .
ChrX	stalkie_big_nohaplotig	exon	17795991	17796437	98	+	.	Parent=comp147213_c0_seq1.mrna2;Target=comp147213_c0_seq1 891 453 .
ChrX	stalkie_big_nohaplotig	CDS	17796048	17796241	.	+	0	Parent=comp147213_c0_seq1.mrna2
ChrX	gffcl	locus	17765750	17775871	.	+	.	ID=RLOC_00001046;geneIDs=FBgn0027066.7.path1;transcripts=FBgn0027066.7.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17765750	17775871	.	+	.	ID=FBgn0027066.7.mrna1;geneID=FBgn0027066.7.path1;Name=FBgn0027066.7;Dir=sensecoverage=99.7;identity=100.0;matches=697;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001046
ChrX	stalkie_big_nohaplotig	exon	17765750	17765840	100	+	.	Parent=FBgn0027066.7.mrna1;Target=FBgn0027066.7 1 91 +
ChrX	stalkie_big_nohaplotig	exon	17774359	17774406	100	+	.	Parent=FBgn0027066.7.mrna1;Target=FBgn0027066.7 92 139 +
ChrX	stalkie_big_nohaplotig	exon	17775314	17775871	100	+	.	Parent=FBgn0027066.7.mrna1;Target=FBgn0027066.7 140 697 +
ChrX	stalkie_big_nohaplotig	CDS	17765750	17765840	.	+	0	Parent=FBgn0027066.7.mrna1;Target=FBgn0027066.7 1 91 +
ChrX	stalkie_big_nohaplotig	CDS	17774359	17774406	.	+	2	Parent=FBgn0027066.7.mrna1;Target=FBgn0027066.7 92 139 +
ChrX	stalkie_big_nohaplotig	CDS	17775314	17775870	.	+	2	Parent=FBgn0027066.7.mrna1;Target=FBgn0027066.7 140 696 +
ChrX	gffcl	locus	17800052	17802269	.	-	.	ID=RLOC_00001047;geneIDs=comp160166_c0_seq1.path1;transcripts=comp160166_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17800052	17802269	.	-	.	ID=comp160166_c0_seq1.mrna1;geneID=comp160166_c0_seq1.path1;Name=comp160166_c0_seq1;Dir=antisensecoverage=99.0;identity=99.2;matches=2088;mismatches=14;indels=3;unknowns=0;Target=comp160166_c0_seq1 1472 2104 .;locus=RLOC_00001047
ChrX	stalkie_big_nohaplotig	exon	17800052	17800352	99	-	.	Parent=comp160166_c0_seq1.mrna1;Target=comp160166_c0_seq1 1 301 -
ChrX	stalkie_big_nohaplotig	exon	17800412	17800814	99	-	.	Parent=comp160166_c0_seq1.mrna1;Target=comp160166_c0_seq1 302 704 -
ChrX	stalkie_big_nohaplotig	exon	17800871	17802269	99	-	.	Parent=comp160166_c0_seq1.mrna1;Target=comp160166_c0_seq1 705 2104 -
ChrX	stalkie_big_nohaplotig	CDS	17801637	17802269	.	-	0	Parent=comp160166_c0_seq1.mrna1
ChrX	gffcl	locus	17837151	17838107	.	-	.	ID=RLOC_00001048;geneIDs=ORF2478.path1;transcripts=ORF2478.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17837151	17838107	.	-	.	ID=ORF2478.mrna1;geneID=ORF2478.path1;Name=ORF2478;Dir=sensecoverage=100.0;identity=100.0;matches=852;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001048
ChrX	stalkie_big_nohaplotig	exon	17837151	17837519	100	-	.	Parent=ORF2478.mrna1;Target=ORF2478 484 852 +
ChrX	stalkie_big_nohaplotig	exon	17837625	17838107	100	-	.	Parent=ORF2478.mrna1;Target=ORF2478 1 483 +
ChrX	stalkie_big_nohaplotig	CDS	17837151	17837519	.	-	0	Parent=ORF2478.mrna1;Target=ORF2478 484 852 +
ChrX	stalkie_big_nohaplotig	CDS	17837625	17838107	.	-	0	Parent=ORF2478.mrna1;Target=ORF2478 1 483 +
ChrX	gffcl	locus	17855810	17856500	.	-	.	ID=RLOC_00001049;geneIDs=comp144940_c1_seq1.path1;transcripts=comp144940_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17855810	17856500	.	-	.	ID=comp144940_c1_seq1.mrna1;geneID=comp144940_c1_seq1.path1;Name=comp144940_c1_seq1;Dir=indeterminatecoverage=49.3;identity=100.0;matches=691;mismatches=0;indels=0;unknowns=0;Target=comp144940_c1_seq1 1402 712 .;CDS_Target=comp144940_c1_seq1 1192 1115 .;locus=RLOC_00001049
ChrX	stalkie_big_nohaplotig	exon	17855810	17856500	100	-	.	Parent=comp144940_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17856020	17856097	.	-	0	Parent=comp144940_c1_seq1.mrna1
ChrX	gffcl	locus	17864253	17902486	.	-	.	ID=RLOC_00001050;geneIDs=comp153995_c0_seq1.path1;transcripts=comp153995_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17864253	17902486	.	-	.	ID=comp153995_c0_seq1.mrna1;geneID=comp153995_c0_seq1.path1;Name=comp153995_c0_seq1;Dir=indeterminatecoverage=87.5;identity=94.4;matches=475;mismatches=23;indels=5;unknowns=0;Target=comp153995_c0_seq1 401 267 .;locus=RLOC_00001050
ChrX	stalkie_big_nohaplotig	exon	17864253	17864628	99	-	.	Parent=comp153995_c0_seq1.mrna1;Target=comp153995_c0_seq1 567 192 .
ChrX	stalkie_big_nohaplotig	exon	17870537	17870540	100	-	.	Parent=comp153995_c0_seq1.mrna1;Target=comp153995_c0_seq1 191 188 .
ChrX	stalkie_big_nohaplotig	exon	17878717	17878738	78	-	.	Parent=comp153995_c0_seq1.mrna1;Target=comp153995_c0_seq1 187 165 .
ChrX	stalkie_big_nohaplotig	exon	17879929	17879936	87	-	.	Parent=comp153995_c0_seq1.mrna1;Target=comp153995_c0_seq1 164 157 .
ChrX	stalkie_big_nohaplotig	exon	17883458	17883465	100	-	.	Parent=comp153995_c0_seq1.mrna1;Target=comp153995_c0_seq1 156 149 .
ChrX	stalkie_big_nohaplotig	exon	17885574	17885580	100	-	.	Parent=comp153995_c0_seq1.mrna1;Target=comp153995_c0_seq1 148 142 .
ChrX	stalkie_big_nohaplotig	exon	17891620	17891673	64	-	.	Parent=comp153995_c0_seq1.mrna1;Target=comp153995_c0_seq1 141 86 .
ChrX	stalkie_big_nohaplotig	exon	17892295	17892299	80	-	.	Parent=comp153995_c0_seq1.mrna1;Target=comp153995_c0_seq1 85 81 .
ChrX	stalkie_big_nohaplotig	exon	17892921	17892924	100	-	.	Parent=comp153995_c0_seq1.mrna1;Target=comp153995_c0_seq1 80 77 .
ChrX	stalkie_big_nohaplotig	exon	17893877	17893885	100	-	.	Parent=comp153995_c0_seq1.mrna1;Target=comp153995_c0_seq1 76 68 .
ChrX	stalkie_big_nohaplotig	exon	17902485	17902486	100	-	.	Parent=comp153995_c0_seq1.mrna1;Target=comp153995_c0_seq1 67 66 .
ChrX	stalkie_big_nohaplotig	CDS	17864419	17864553	.	-	0	Parent=comp153995_c0_seq1.mrna1
ChrX	gffcl	locus	17866209	17867075	.	+	.	ID=RLOC_00001051;geneIDs=comp142574_c0_seq1.path1;transcripts=comp142574_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17866209	17867075	.	+	.	ID=comp142574_c0_seq1.mrna1;geneID=comp142574_c0_seq1.path1;Name=comp142574_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.5;matches=863;mismatches=4;indels=0;unknowns=0;Target=comp142574_c0_seq1 868 2 .;CDS_Target=comp142574_c0_seq1 401 288 .;locus=RLOC_00001051
ChrX	stalkie_big_nohaplotig	exon	17866209	17867075	99	+	.	Parent=comp142574_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17866495	17866608	.	+	0	Parent=comp142574_c0_seq1.mrna1
ChrX	gffcl	locus	17872124	17951585	.	-	.	ID=RLOC_00001052;geneIDs=FBgn0010473.1.path1;transcripts=FBgn0010473.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17872124	17951585	.	-	.	ID=FBgn0010473.1.mrna1;geneID=FBgn0010473.1.path1;Name=FBgn0010473.1;Dir=sensecoverage=93.6;identity=100.0;matches=4316;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001052
ChrX	stalkie_big_nohaplotig	exon	17872124	17874158	100	-	.	Parent=FBgn0010473.1.mrna1;Target=FBgn0010473.1 2580 4614 +
ChrX	stalkie_big_nohaplotig	exon	17874674	17874679	100	-	.	Parent=FBgn0010473.1.mrna1;Target=FBgn0010473.1 2574 2579 +
ChrX	stalkie_big_nohaplotig	exon	17878377	17878379	66	-	.	Parent=FBgn0010473.1.mrna1;Target=FBgn0010473.1 2571 2573 +
ChrX	stalkie_big_nohaplotig	exon	17878957	17879071	100	-	.	Parent=FBgn0010473.1.mrna1;Target=FBgn0010473.1 2456 2570 +
ChrX	stalkie_big_nohaplotig	exon	17892395	17892808	100	-	.	Parent=FBgn0010473.1.mrna1;Target=FBgn0010473.1 2042 2455 +
ChrX	stalkie_big_nohaplotig	exon	17902316	17902399	100	-	.	Parent=FBgn0010473.1.mrna1;Target=FBgn0010473.1 1958 2041 +
ChrX	stalkie_big_nohaplotig	exon	17908700	17909563	100	-	.	Parent=FBgn0010473.1.mrna1;Target=FBgn0010473.1 1094 1957 +
ChrX	stalkie_big_nohaplotig	exon	17911007	17911277	99	-	.	Parent=FBgn0010473.1.mrna1;Target=FBgn0010473.1 823 1093 +
ChrX	stalkie_big_nohaplotig	exon	17942002	17942243	100	-	.	Parent=FBgn0010473.1.mrna1;Target=FBgn0010473.1 581 822 +
ChrX	stalkie_big_nohaplotig	exon	17951302	17951585	100	-	.	Parent=FBgn0010473.1.mrna1;Target=FBgn0010473.1 297 580 +
ChrX	stalkie_big_nohaplotig	CDS	17872124	17874158	.	-	1	Parent=FBgn0010473.1.mrna1;Target=FBgn0010473.1 2580 4614 +
ChrX	stalkie_big_nohaplotig	CDS	17874674	17874679	.	-	1	Parent=FBgn0010473.1.mrna1;Target=FBgn0010473.1 2574 2579 +
ChrX	stalkie_big_nohaplotig	CDS	17878377	17878379	.	-	1	Parent=FBgn0010473.1.mrna1;Target=FBgn0010473.1 2571 2573 +
ChrX	stalkie_big_nohaplotig	CDS	17878957	17879071	.	-	2	Parent=FBgn0010473.1.mrna1;Target=FBgn0010473.1 2456 2570 +
ChrX	stalkie_big_nohaplotig	CDS	17892395	17892808	.	-	2	Parent=FBgn0010473.1.mrna1;Target=FBgn0010473.1 2042 2455 +
ChrX	stalkie_big_nohaplotig	CDS	17902316	17902399	.	-	2	Parent=FBgn0010473.1.mrna1;Target=FBgn0010473.1 1958 2041 +
ChrX	stalkie_big_nohaplotig	CDS	17908700	17909563	.	-	2	Parent=FBgn0010473.1.mrna1;Target=FBgn0010473.1 1094 1957 +
ChrX	stalkie_big_nohaplotig	CDS	17911007	17911277	.	-	0	Parent=FBgn0010473.1.mrna1;Target=FBgn0010473.1 823 1093 +
ChrX	stalkie_big_nohaplotig	CDS	17942002	17942243	.	-	2	Parent=FBgn0010473.1.mrna1;Target=FBgn0010473.1 581 822 +
ChrX	stalkie_big_nohaplotig	CDS	17951302	17951584	.	-	0	Parent=FBgn0010473.1.mrna1;Target=FBgn0010473.1 298 580 +
ChrX	gffcl	locus	17933415	19093686	.	-	.	ID=RLOC_00001053;geneIDs=comp151277_c0_seq1.path1;transcripts=comp151277_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17933415	19093686	.	-	.	ID=comp151277_c0_seq1.mrna1;geneID=comp151277_c0_seq1.path1;Name=comp151277_c0_seq1;Dir=indeterminatecoverage=75.4;identity=98.0;matches=250;mismatches=5;indels=0;unknowns=0;Target=comp151277_c0_seq1 255 221 .;locus=RLOC_00001053
ChrX	stalkie_big_nohaplotig	exon	17933415	17933497	93	-	.	Parent=comp151277_c0_seq1.mrna1;Target=comp151277_c0_seq1 255 173 .
ChrX	stalkie_big_nohaplotig	exon	19093515	19093686	100	-	.	Parent=comp151277_c0_seq1.mrna1;Target=comp151277_c0_seq1 172 1 .
ChrX	stalkie_big_nohaplotig	CDS	17933415	17933449	.	-	0	Parent=comp151277_c0_seq1.mrna1
ChrX	gffcl	locus	17982708	18158001	.	+	.	ID=RLOC_00001054;geneIDs=comp160145_c0_seq1.path1;transcripts=comp160145_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17982708	18158001	.	+	.	ID=comp160145_c0_seq1.mrna1;geneID=comp160145_c0_seq1.path1;Name=comp160145_c0_seq1;Dir=sensecoverage=70.9;identity=97.2;matches=1753;mismatches=36;indels=14;unknowns=0;Target=comp160145_c0_seq1 2095 2199 +;locus=RLOC_00001054
ChrX	stalkie_big_nohaplotig	exon	17982708	17982721	100	+	.	Parent=comp160145_c0_seq1.mrna1;Target=comp160145_c0_seq1 554 567 +
ChrX	stalkie_big_nohaplotig	exon	18002908	18002916	100	+	.	Parent=comp160145_c0_seq1.mrna1;Target=comp160145_c0_seq1 593 601 +
ChrX	stalkie_big_nohaplotig	exon	18034976	18034980	100	+	.	Parent=comp160145_c0_seq1.mrna1;Target=comp160145_c0_seq1 602 606 +
ChrX	stalkie_big_nohaplotig	exon	18037195	18037202	100	+	.	Parent=comp160145_c0_seq1.mrna1;Target=comp160145_c0_seq1 607 614 +
ChrX	stalkie_big_nohaplotig	exon	18037568	18037577	72	+	.	Parent=comp160145_c0_seq1.mrna1;Target=comp160145_c0_seq1 615 625 +
ChrX	stalkie_big_nohaplotig	exon	18042886	18042895	100	+	.	Parent=comp160145_c0_seq1.mrna1;Target=comp160145_c0_seq1 626 635 +
ChrX	stalkie_big_nohaplotig	exon	18049727	18049731	100	+	.	Parent=comp160145_c0_seq1.mrna1;Target=comp160145_c0_seq1 636 640 +
ChrX	stalkie_big_nohaplotig	exon	18054499	18054500	100	+	.	Parent=comp160145_c0_seq1.mrna1;Target=comp160145_c0_seq1 641 642 +
ChrX	stalkie_big_nohaplotig	exon	18055181	18055182	100	+	.	Parent=comp160145_c0_seq1.mrna1;Target=comp160145_c0_seq1 643 644 +
ChrX	stalkie_big_nohaplotig	exon	18056535	18056542	100	+	.	Parent=comp160145_c0_seq1.mrna1;Target=comp160145_c0_seq1 645 652 +
ChrX	stalkie_big_nohaplotig	exon	18056575	18056583	100	+	.	Parent=comp160145_c0_seq1.mrna1;Target=comp160145_c0_seq1 682 690 +
ChrX	stalkie_big_nohaplotig	exon	18058140	18058191	56	+	.	Parent=comp160145_c0_seq1.mrna1;Target=comp160145_c0_seq1 783 827 +
ChrX	stalkie_big_nohaplotig	exon	18058203	18058206	100	+	.	Parent=comp160145_c0_seq1.mrna1;Target=comp160145_c0_seq1 875 878 +
ChrX	stalkie_big_nohaplotig	exon	18059719	18059727	100	+	.	Parent=comp160145_c0_seq1.mrna1;Target=comp160145_c0_seq1 879 887 +
ChrX	stalkie_big_nohaplotig	exon	18059738	18059745	100	+	.	Parent=comp160145_c0_seq1.mrna1;Target=comp160145_c0_seq1 917 924 +
ChrX	stalkie_big_nohaplotig	exon	18117574	18117606	57	+	.	Parent=comp160145_c0_seq1.mrna1;Target=comp160145_c0_seq1 1052 1084 +
ChrX	stalkie_big_nohaplotig	exon	18130129	18130133	80	+	.	Parent=comp160145_c0_seq1.mrna1;Target=comp160145_c0_seq1 1085 1089 +
ChrX	stalkie_big_nohaplotig	exon	18134262	18135000	99	+	.	Parent=comp160145_c0_seq1.mrna1;Target=comp160145_c0_seq1 1090 1828 +
ChrX	stalkie_big_nohaplotig	exon	18135086	18135167	97	+	.	Parent=comp160145_c0_seq1.mrna1;Target=comp160145_c0_seq1 1829 1910 +
ChrX	stalkie_big_nohaplotig	exon	18135226	18135362	99	+	.	Parent=comp160145_c0_seq1.mrna1;Target=comp160145_c0_seq1 1911 2047 +
ChrX	stalkie_big_nohaplotig	exon	18157271	18157729	99	+	.	Parent=comp160145_c0_seq1.mrna1;Target=comp160145_c0_seq1 2048 2506 +
ChrX	stalkie_big_nohaplotig	exon	18157815	18158001	99	+	.	Parent=comp160145_c0_seq1.mrna1;Target=comp160145_c0_seq1 2507 2693 +
ChrX	stalkie_big_nohaplotig	CDS	18157318	18157422	.	+	0	Parent=comp160145_c0_seq1.mrna1
ChrX	gffcl	locus	17992868	17993154	.	+	.	ID=RLOC_00001055;geneIDs=comp86117_c0_seq1.path1;transcripts=comp86117_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	17992868	17993154	.	+	.	ID=comp86117_c0_seq1.mrna1;geneID=comp86117_c0_seq1.path1;Name=comp86117_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=287;mismatches=0;indels=0;unknowns=0;Target=comp86117_c0_seq1 287 1 .;CDS_Target=comp86117_c0_seq1 220 2 .;locus=RLOC_00001055
ChrX	stalkie_big_nohaplotig	exon	17992868	17993154	100	+	.	Parent=comp86117_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	17992869	17993087	.	+	0	Parent=comp86117_c0_seq1.mrna1
ChrX	gffcl	locus	17993171	17993368	.	-	.	ID=RLOC_00001056;geneIDs=comp145341_c0_seq1.path2;transcripts=comp145341_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	17993171	17993368	.	-	.	ID=comp145341_c0_seq1.mrna2;geneID=comp145341_c0_seq1.path2;Name=comp145341_c0_seq1;Dir=indeterminatecoverage=24.8;identity=100.0;matches=198;mismatches=0;indels=0;unknowns=0;Target=comp145341_c0_seq1 793 596 .;CDS_Target=comp145341_c0_seq1 793 653 .;locus=RLOC_00001056
ChrX	stalkie_big_nohaplotig	exon	17993171	17993368	100	-	.	Parent=comp145341_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	17993171	17993311	.	-	0	Parent=comp145341_c0_seq1.mrna2
ChrX	gffcl	locus	18017392	18018536	.	-	.	ID=RLOC_00001057;geneIDs=ORF1360.path2;transcripts=ORF1360.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	18017392	18018536	.	-	.	ID=ORF1360.mrna2;geneID=ORF1360.path2;Name=ORF1360;Dir=sensecoverage=95.7;identity=99.2;matches=1071;mismatches=9;indels=0;unknowns=0;locus=RLOC_00001057
ChrX	stalkie_big_nohaplotig	exon	18017392	18017546	100	-	.	Parent=ORF1360.mrna2;Target=ORF1360 974 1128 +
ChrX	stalkie_big_nohaplotig	exon	18017612	18018536	99	-	.	Parent=ORF1360.mrna2;Target=ORF1360 49 973 +
ChrX	stalkie_big_nohaplotig	CDS	18017392	18017546	.	-	2	Parent=ORF1360.mrna2;Target=ORF1360 974 1128 +
ChrX	stalkie_big_nohaplotig	CDS	18017612	18018536	.	-	0	Parent=ORF1360.mrna2;Target=ORF1360 49 973 +
ChrX	gffcl	locus	18023496	18023932	.	+	.	ID=RLOC_00001058;geneIDs=comp5193_c1_seq1.path1;transcripts=comp5193_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18023496	18023932	.	+	.	ID=comp5193_c1_seq1.mrna1;geneID=comp5193_c1_seq1.path1;Name=comp5193_c1_seq1;Dir=sensecoverage=94.1;identity=100.0;matches=354;mismatches=0;indels=0;unknowns=0;Target=comp5193_c1_seq1 125 226 +;locus=RLOC_00001058
ChrX	stalkie_big_nohaplotig	exon	18023496	18023555	100	+	.	Parent=comp5193_c1_seq1.mrna1;Target=comp5193_c1_seq1 23 82 +
ChrX	stalkie_big_nohaplotig	exon	18023639	18023932	100	+	.	Parent=comp5193_c1_seq1.mrna1;Target=comp5193_c1_seq1 83 376 +
ChrX	stalkie_big_nohaplotig	CDS	18023681	18023782	.	+	0	Parent=comp5193_c1_seq1.mrna1
ChrX	gffcl	locus	18044781	18046815	.	+	.	ID=RLOC_00001060;geneIDs=comp156139_c0_seq1.path1;transcripts=comp156139_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18044781	18046815	.	+	.	ID=comp156139_c0_seq1.mrna1;geneID=comp156139_c0_seq1.path1;Name=comp156139_c0_seq1;Dir=antisensecoverage=99.8;identity=99.0;matches=881;mismatches=4;indels=5;unknowns=0;locus=RLOC_00001060
ChrX	stalkie_big_nohaplotig	exon	18044781	18044949	100	+	.	Parent=comp156139_c0_seq1.mrna1;Target=comp156139_c0_seq1 718 886 -
ChrX	stalkie_big_nohaplotig	exon	18046023	18046327	100	+	.	Parent=comp156139_c0_seq1.mrna1;Target=comp156139_c0_seq1 413 717 -
ChrX	stalkie_big_nohaplotig	exon	18046400	18046815	97	+	.	Parent=comp156139_c0_seq1.mrna1;Target=comp156139_c0_seq1 2 412 -
ChrX	stalkie_big_nohaplotig	CDS	18044830	18044949	.	+	0	Parent=comp156139_c0_seq1.mrna1;Target=comp156139_c0_seq1 718 837 .
ChrX	stalkie_big_nohaplotig	CDS	18046023	18046271	.	+	0	Parent=comp156139_c0_seq1.mrna1;Target=comp156139_c0_seq1 469 717 .
ChrX	gffcl	locus	18052167	18052997	.	+	.	ID=RLOC_00001061;geneIDs=ORF3028.path1;transcripts=ORF3028.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18052167	18052997	.	+	.	ID=ORF3028.mrna1;geneID=ORF3028.path1;Name=ORF3028;Dir=sensecoverage=100.0;identity=99.5;matches=773;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001061
ChrX	stalkie_big_nohaplotig	exon	18052167	18052649	99	+	.	Parent=ORF3028.mrna1;Target=ORF3028 1 483 +
ChrX	stalkie_big_nohaplotig	exon	18052704	18052997	99	+	.	Parent=ORF3028.mrna1;Target=ORF3028 484 777 +
ChrX	stalkie_big_nohaplotig	CDS	18052167	18052649	.	+	0	Parent=ORF3028.mrna1;Target=ORF3028 1 483 +
ChrX	stalkie_big_nohaplotig	CDS	18052704	18052997	.	+	0	Parent=ORF3028.mrna1;Target=ORF3028 484 777 +
ChrX	gffcl	locus	18077880	18078986	.	+	.	ID=RLOC_00001062;geneIDs=ORF1623.path1;transcripts=ORF1623.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18077880	18078986	.	+	.	ID=ORF1623.mrna1;geneID=ORF1623.path1;Name=ORF1623;Dir=sensecoverage=100.0;identity=99.8;matches=1039;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001062
ChrX	stalkie_big_nohaplotig	exon	18077880	18078801	99	+	.	Parent=ORF1623.mrna1;Target=ORF1623 1 922 +
ChrX	stalkie_big_nohaplotig	exon	18078868	18078986	100	+	.	Parent=ORF1623.mrna1;Target=ORF1623 923 1041 +
ChrX	stalkie_big_nohaplotig	CDS	18077880	18078801	.	+	0	Parent=ORF1623.mrna1;Target=ORF1623 1 922 +
ChrX	stalkie_big_nohaplotig	CDS	18078868	18078986	.	+	2	Parent=ORF1623.mrna1;Target=ORF1623 923 1041 +
ChrX	gffcl	locus	18086835	18088745	.	+	.	ID=RLOC_00001063;geneIDs=comp161161_c1_seq1.path1;transcripts=comp161161_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18086835	18088745	.	+	.	ID=comp161161_c1_seq1.mrna1;geneID=comp161161_c1_seq1.path1;Name=comp161161_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1908;mismatches=3;indels=2;unknowns=0;Target=comp161161_c1_seq1 1913 1 .;CDS_Target=comp161161_c1_seq1 1259 1029 .;locus=RLOC_00001063
ChrX	stalkie_big_nohaplotig	exon	18086835	18088745	99	+	.	Parent=comp161161_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18087861	18088091	.	+	0	Parent=comp161161_c1_seq1.mrna1
ChrX	gffcl	locus	18106545	18106831	.	+	.	ID=RLOC_00001064;geneIDs=comp94878_c0_seq1.path1;transcripts=comp94878_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18106545	18106831	.	+	.	ID=comp94878_c0_seq1.mrna1;geneID=comp94878_c0_seq1.path1;Name=comp94878_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.5;matches=277;mismatches=4;indels=6;unknowns=0;Target=comp94878_c0_seq1 281 1 .;CDS_Target=comp94878_c0_seq1 255 109 .;locus=RLOC_00001064
ChrX	stalkie_big_nohaplotig	exon	18106545	18106831	96	+	.	Parent=comp94878_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18106653	18106805	.	+	0	Parent=comp94878_c0_seq1.mrna1
ChrX	gffcl	locus	18114694	18117688	.	-	.	ID=RLOC_00001065;geneIDs=comp144133_c0_seq1.path1;transcripts=comp144133_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18114694	18117688	.	-	.	ID=comp144133_c0_seq1.mrna1;geneID=comp144133_c0_seq1.path1;Name=comp144133_c0_seq1;Dir=antisensecoverage=98.1;identity=100.0;matches=844;mismatches=0;indels=0;unknowns=0;Target=comp144133_c0_seq1 137 586 .;locus=RLOC_00001065
ChrX	stalkie_big_nohaplotig	exon	18114694	18115280	100	-	.	Parent=comp144133_c0_seq1.mrna1;Target=comp144133_c0_seq1 17 603 -
ChrX	stalkie_big_nohaplotig	exon	18115354	18115496	100	-	.	Parent=comp144133_c0_seq1.mrna1;Target=comp144133_c0_seq1 604 746 -
ChrX	stalkie_big_nohaplotig	exon	18117575	18117688	100	-	.	Parent=comp144133_c0_seq1.mrna1;Target=comp144133_c0_seq1 747 860 -
ChrX	stalkie_big_nohaplotig	CDS	18114814	18115263	.	-	0	Parent=comp144133_c0_seq1.mrna1
ChrX	gffcl	locus	18144733	18150230	.	+	.	ID=RLOC_00001066;geneIDs=comp161572_c0_seq1.path1;transcripts=comp161572_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18144733	18150230	.	+	.	ID=comp161572_c0_seq1.mrna1;geneID=comp161572_c0_seq1.path1;Name=comp161572_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=2685;mismatches=7;indels=6;unknowns=0;Target=comp161572_c0_seq1 360 710 +;locus=RLOC_00001066
ChrX	stalkie_big_nohaplotig	exon	18144733	18144975	99	+	.	Parent=comp161572_c0_seq1.mrna1;Target=comp161572_c0_seq1 1 243 +
ChrX	stalkie_big_nohaplotig	exon	18146509	18147134	99	+	.	Parent=comp161572_c0_seq1.mrna1;Target=comp161572_c0_seq1 244 869 +
ChrX	stalkie_big_nohaplotig	exon	18147198	18147435	99	+	.	Parent=comp161572_c0_seq1.mrna1;Target=comp161572_c0_seq1 870 1107 +
ChrX	stalkie_big_nohaplotig	exon	18147487	18147674	100	+	.	Parent=comp161572_c0_seq1.mrna1;Target=comp161572_c0_seq1 1108 1295 +
ChrX	stalkie_big_nohaplotig	exon	18147787	18147911	100	+	.	Parent=comp161572_c0_seq1.mrna1;Target=comp161572_c0_seq1 1296 1420 +
ChrX	stalkie_big_nohaplotig	exon	18147985	18148880	98	+	.	Parent=comp161572_c0_seq1.mrna1;Target=comp161572_c0_seq1 1421 2322 +
ChrX	stalkie_big_nohaplotig	exon	18149780	18149967	100	+	.	Parent=comp161572_c0_seq1.mrna1;Target=comp161572_c0_seq1 2323 2510 +
ChrX	stalkie_big_nohaplotig	exon	18150043	18150230	100	+	.	Parent=comp161572_c0_seq1.mrna1;Target=comp161572_c0_seq1 2511 2698 +
ChrX	stalkie_big_nohaplotig	CDS	18146625	18146975	.	+	0	Parent=comp161572_c0_seq1.mrna1
ChrX	gffcl	locus	18154407	18155915	.	-	.	ID=RLOC_00001067;geneIDs=comp157572_c0_seq1.path1;transcripts=comp157572_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18154407	18155915	.	-	.	ID=comp157572_c0_seq1.mrna1;geneID=comp157572_c0_seq1.path1;Name=comp157572_c0_seq1;Dir=sensecoverage=97.5;identity=99.3;matches=979;mismatches=7;indels=0;unknowns=0;locus=RLOC_00001067
ChrX	stalkie_big_nohaplotig	exon	18154407	18154751	99	-	.	Parent=comp157572_c0_seq1.mrna1;Target=comp157572_c0_seq1 652 996 +
ChrX	stalkie_big_nohaplotig	exon	18154808	18155251	99	-	.	Parent=comp157572_c0_seq1.mrna1;Target=comp157572_c0_seq1 208 651 +
ChrX	stalkie_big_nohaplotig	exon	18155719	18155915	99	-	.	Parent=comp157572_c0_seq1.mrna1;Target=comp157572_c0_seq1 11 207 +
ChrX	stalkie_big_nohaplotig	CDS	18155150	18155251	.	-	0	Parent=comp157572_c0_seq1.mrna1;Target=comp157572_c0_seq1 208 309 +
ChrX	stalkie_big_nohaplotig	CDS	18155719	18155826	.	-	0	Parent=comp157572_c0_seq1.mrna1;Target=comp157572_c0_seq1 100 207 +
ChrX	gffcl	locus	18160195	18160726	.	-	.	ID=RLOC_00001068;geneIDs=comp151427_c1_seq1.path1;transcripts=comp151427_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18160195	18160726	.	-	.	ID=comp151427_c1_seq1.mrna1;geneID=comp151427_c1_seq1.path1;Name=comp151427_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=530;mismatches=2;indels=0;unknowns=0;Target=comp151427_c1_seq1 532 1 .;CDS_Target=comp151427_c1_seq1 305 225 .;locus=RLOC_00001068
ChrX	stalkie_big_nohaplotig	exon	18160195	18160726	99	-	.	Parent=comp151427_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18160422	18160502	.	-	0	Parent=comp151427_c1_seq1.mrna1
ChrX	gffcl	locus	18163471	18164500	.	-	.	ID=RLOC_00001069;geneIDs=comp138770_c0_seq1.path1;transcripts=comp138770_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18163471	18164500	.	-	.	ID=comp138770_c0_seq1.mrna1;geneID=comp138770_c0_seq1.path1;Name=comp138770_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1027;mismatches=3;indels=0;unknowns=0;Target=comp138770_c0_seq1 1030 1 .;CDS_Target=comp138770_c0_seq1 224 3 .;locus=RLOC_00001069
ChrX	stalkie_big_nohaplotig	exon	18163471	18164500	99	-	.	Parent=comp138770_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18164277	18164498	.	-	0	Parent=comp138770_c0_seq1.mrna1
ChrX	gffcl	locus	18165459	18167307	.	+	.	ID=RLOC_00001070;geneIDs=comp144238_c0_seq1.path1;transcripts=comp144238_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18165459	18167307	.	+	.	ID=comp144238_c0_seq1.mrna1;geneID=comp144238_c0_seq1.path1;Name=comp144238_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=1071;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001070
ChrX	stalkie_big_nohaplotig	exon	18165459	18166053	99	+	.	Parent=comp144238_c0_seq1.mrna1;Target=comp144238_c0_seq1 1 595 +
ChrX	stalkie_big_nohaplotig	exon	18166214	18166291	100	+	.	Parent=comp144238_c0_seq1.mrna1;Target=comp144238_c0_seq1 596 673 +
ChrX	stalkie_big_nohaplotig	exon	18166909	18167307	100	+	.	Parent=comp144238_c0_seq1.mrna1;Target=comp144238_c0_seq1 674 1072 +
ChrX	stalkie_big_nohaplotig	CDS	18165686	18166053	.	+	0	Parent=comp144238_c0_seq1.mrna1;Target=comp144238_c0_seq1 228 595 +
ChrX	stalkie_big_nohaplotig	CDS	18166214	18166232	.	+	1	Parent=comp144238_c0_seq1.mrna1;Target=comp144238_c0_seq1 596 614 +
ChrX	gffcl	locus	18181767	18183022	.	-	.	ID=RLOC_00001071;geneIDs=comp159926_c0_seq1.path1;transcripts=comp159926_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18181767	18183022	.	-	.	ID=comp159926_c0_seq1.mrna1;geneID=comp159926_c0_seq1.path1;Name=comp159926_c0_seq1;Dir=sensecoverage=80.3;identity=97.5;matches=1043;mismatches=27;indels=0;unknowns=0;locus=RLOC_00001071
ChrX	stalkie_big_nohaplotig	exon	18181767	18181868	95	-	.	Parent=comp159926_c0_seq1.mrna1;Target=comp159926_c0_seq1 1219 1320 +
ChrX	stalkie_big_nohaplotig	exon	18182055	18183022	97	-	.	Parent=comp159926_c0_seq1.mrna1;Target=comp159926_c0_seq1 251 1218 +
ChrX	stalkie_big_nohaplotig	CDS	18181768	18181868	.	-	2	Parent=comp159926_c0_seq1.mrna1;Target=comp159926_c0_seq1 1219 1319 +
ChrX	stalkie_big_nohaplotig	CDS	18182055	18182637	.	-	0	Parent=comp159926_c0_seq1.mrna1;Target=comp159926_c0_seq1 636 1218 +
ChrX	gffcl	locus	18188687	18189376	.	-	.	ID=RLOC_00001073;geneIDs=comp114757_c0_seq1.path1;transcripts=comp114757_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18188687	18189376	.	-	.	ID=comp114757_c0_seq1.mrna1;geneID=comp114757_c0_seq1.path1;Name=comp114757_c0_seq1;Dir=indeterminatecoverage=96.8;identity=100.0;matches=690;mismatches=0;indels=0;unknowns=0;Target=comp114757_c0_seq1 713 24 .;CDS_Target=comp114757_c0_seq1 557 393 .;locus=RLOC_00001073
ChrX	stalkie_big_nohaplotig	exon	18188687	18189376	100	-	.	Parent=comp114757_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18188843	18189007	.	-	0	Parent=comp114757_c0_seq1.mrna1
ChrX	gffcl	locus	18190765	18191808	.	-	.	ID=RLOC_00001074;geneIDs=FBgn0264270.2.path1;transcripts=FBgn0264270.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18190765	18191808	.	-	.	ID=FBgn0264270.2.mrna1;geneID=FBgn0264270.2.path1;Name=FBgn0264270.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1044;mismatches=0;indels=0;unknowns=0;Target=FBgn0264270.2 1044 1 .;locus=RLOC_00001074
ChrX	stalkie_big_nohaplotig	exon	18190765	18191808	100	-	.	Parent=FBgn0264270.2.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18190765	18191808	.	-	0	Parent=FBgn0264270.2.mrna1
ChrX	gffcl	locus	18204130	18206832	.	-	.	ID=RLOC_00001075;geneIDs=ORF186.path1;transcripts=ORF186.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18204130	18206832	.	-	.	ID=ORF186.mrna1;geneID=ORF186.path1;Name=ORF186;Dir=sensecoverage=100.0;identity=98.7;matches=2611;mismatches=2;indels=33;unknowns=0;locus=RLOC_00001075
ChrX	stalkie_big_nohaplotig	exon	18204130	18206693	98	-	.	Parent=ORF186.mrna1;Target=ORF186 83 2613 +
ChrX	stalkie_big_nohaplotig	exon	18206751	18206832	98	-	.	Parent=ORF186.mrna1;Target=ORF186 1 82 +
ChrX	stalkie_big_nohaplotig	CDS	18204130	18206693	.	-	2	Parent=ORF186.mrna1;Target=ORF186 83 2613 +
ChrX	stalkie_big_nohaplotig	CDS	18206751	18206832	.	-	0	Parent=ORF186.mrna1;Target=ORF186 1 82 +
ChrX	gffcl	locus	18230770	18231513	.	-	.	ID=RLOC_00001076;geneIDs=comp147685_c0_seq1.path1,comp147685_c0_seq1.path2;transcripts=comp147685_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	18230770	18231513	.	-	.	ID=comp147685_c0_seq1.mrna2;geneID=comp147685_c0_seq1.path2;Name=comp147685_c0_seq1;Dir=sensecoverage=87.6;identity=99.2;matches=603;mismatches=5;indels=0;unknowns=0;locus=RLOC_00001076
ChrX	stalkie_big_nohaplotig	exon	18230770	18231126	99	-	.	Parent=comp147685_c0_seq1.mrna2;Target=comp147685_c0_seq1 338 694 +
ChrX	stalkie_big_nohaplotig	exon	18231263	18231513	98	-	.	Parent=comp147685_c0_seq1.mrna2;Target=comp147685_c0_seq1 87 337 +
ChrX	stalkie_big_nohaplotig	CDS	18230899	18231126	.	-	0	Parent=comp147685_c0_seq1.mrna2;Target=comp147685_c0_seq1 338 565 +
ChrX	stalkie_big_nohaplotig	CDS	18231263	18231265	.	-	0	Parent=comp147685_c0_seq1.mrna2;Target=comp147685_c0_seq1 335 337 +
ChrX	gffcl	locus	18233581	18234155	.	+	.	ID=RLOC_00001077;geneIDs=comp146830_c0_seq1.path1;transcripts=comp146830_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18233581	18234155	.	+	.	ID=comp146830_c0_seq1.mrna1;geneID=comp146830_c0_seq1.path1;Name=comp146830_c0_seq1;Dir=sensecoverage=99.6;identity=100.0;matches=510;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001077
ChrX	stalkie_big_nohaplotig	exon	18233581	18233696	100	+	.	Parent=comp146830_c0_seq1.mrna1;Target=comp146830_c0_seq1 2 117 +
ChrX	stalkie_big_nohaplotig	exon	18233762	18234155	100	+	.	Parent=comp146830_c0_seq1.mrna1;Target=comp146830_c0_seq1 118 511 +
ChrX	stalkie_big_nohaplotig	CDS	18233694	18233696	.	+	0	Parent=comp146830_c0_seq1.mrna1;Target=comp146830_c0_seq1 115 117 +
ChrX	stalkie_big_nohaplotig	CDS	18233762	18233983	.	+	0	Parent=comp146830_c0_seq1.mrna1;Target=comp146830_c0_seq1 118 339 +
ChrX	gffcl	locus	18292711	18293460	.	+	.	ID=RLOC_00001078;geneIDs=ORF3262.path1;transcripts=ORF3262.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18292711	18293460	.	+	.	ID=ORF3262.mrna1;geneID=ORF3262.path1;Name=ORF3262;Dir=indeterminatecoverage=100.0;identity=100.0;matches=750;mismatches=0;indels=0;unknowns=0;Target=ORF3262 750 1 .;locus=RLOC_00001078
ChrX	stalkie_big_nohaplotig	exon	18292711	18293460	100	+	.	Parent=ORF3262.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18292711	18293460	.	+	0	Parent=ORF3262.mrna1
ChrX	gffcl	locus	18310013	18311156	.	-	.	ID=RLOC_00001079;geneIDs=comp151878_c0_seq1.path1;transcripts=comp151878_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18310013	18311156	.	-	.	ID=comp151878_c0_seq1.mrna1;geneID=comp151878_c0_seq1.path1;Name=comp151878_c0_seq1;Dir=antisensecoverage=98.9;identity=96.4;matches=845;mismatches=12;indels=20;unknowns=0;locus=RLOC_00001079
ChrX	stalkie_big_nohaplotig	exon	18310013	18310241	99	-	.	Parent=comp151878_c0_seq1.mrna1;Target=comp151878_c0_seq1 11 239 -
ChrX	stalkie_big_nohaplotig	exon	18310308	18310592	99	-	.	Parent=comp151878_c0_seq1.mrna1;Target=comp151878_c0_seq1 240 524 -
ChrX	stalkie_big_nohaplotig	exon	18310651	18310802	84	-	.	Parent=comp151878_c0_seq1.mrna1;Target=comp151878_c0_seq1 525 694 -
ChrX	stalkie_big_nohaplotig	exon	18310965	18311156	98	-	.	Parent=comp151878_c0_seq1.mrna1;Target=comp151878_c0_seq1 695 886 -
ChrX	stalkie_big_nohaplotig	CDS	18310112	18310241	.	-	1	Parent=comp151878_c0_seq1.mrna1;Target=comp151878_c0_seq1 110 239 .
ChrX	stalkie_big_nohaplotig	CDS	18310308	18310453	.	-	0	Parent=comp151878_c0_seq1.mrna1;Target=comp151878_c0_seq1 240 385 .
ChrX	gffcl	locus	18349475	18351850	.	-	.	ID=RLOC_00001080;geneIDs=comp152402_c0_seq1.path1;transcripts=comp152402_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18349475	18351850	.	-	.	ID=comp152402_c0_seq1.mrna1;geneID=comp152402_c0_seq1.path1;Name=comp152402_c0_seq1;Dir=indeterminatecoverage=98.6;identity=99.2;matches=1299;mismatches=10;indels=1;unknowns=0;locus=RLOC_00001080
ChrX	stalkie_big_nohaplotig	exon	18349475	18349978	99	-	.	Parent=comp152402_c0_seq1.mrna1;Target=comp152402_c0_seq1 1309 807 .
ChrX	stalkie_big_nohaplotig	exon	18350029	18350108	100	-	.	Parent=comp152402_c0_seq1.mrna1;Target=comp152402_c0_seq1 806 727 .
ChrX	stalkie_big_nohaplotig	exon	18350405	18350744	99	-	.	Parent=comp152402_c0_seq1.mrna1;Target=comp152402_c0_seq1 726 387 .
ChrX	stalkie_big_nohaplotig	exon	18350820	18350992	100	-	.	Parent=comp152402_c0_seq1.mrna1;Target=comp152402_c0_seq1 386 214 .
ChrX	stalkie_big_nohaplotig	exon	18351055	18351110	100	-	.	Parent=comp152402_c0_seq1.mrna1;Target=comp152402_c0_seq1 213 158 .
ChrX	stalkie_big_nohaplotig	exon	18351694	18351850	96	-	.	Parent=comp152402_c0_seq1.mrna1;Target=comp152402_c0_seq1 157 1 .
ChrX	stalkie_big_nohaplotig	CDS	18349966	18349978	.	-	0	Parent=comp152402_c0_seq1.mrna1;Target=comp152402_c0_seq1 818 807 .
ChrX	stalkie_big_nohaplotig	CDS	18350029	18350108	.	-	2	Parent=comp152402_c0_seq1.mrna1;Target=comp152402_c0_seq1 806 727 .
ChrX	stalkie_big_nohaplotig	CDS	18350405	18350450	.	-	0	Parent=comp152402_c0_seq1.mrna1;Target=comp152402_c0_seq1 726 681 .
ChrX	gffcl	locus	18367064	18744231	.	-	.	ID=RLOC_00001081;geneIDs=ORF222.path1,comp162710_c1_seq1.path1;transcripts=comp162710_c1_seq1.mrna1,ORF222.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18367064	18744231	.	-	.	ID=comp162710_c1_seq1.mrna1;geneID=comp162710_c1_seq1.path1;Name=comp162710_c1_seq1;Dir=sensecoverage=88.0;identity=98.1;matches=1828;mismatches=10;indels=25;unknowns=0;Target=comp162710_c1_seq1 173 415 +;locus=RLOC_00001081
ChrX	stalkie_big_nohaplotig	exon	18367064	18367066	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2267 2269 +
ChrX	stalkie_big_nohaplotig	exon	18382879	18382889	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2255 2265 +
ChrX	stalkie_big_nohaplotig	exon	18388628	18388631	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2251 2254 +
ChrX	stalkie_big_nohaplotig	exon	18390531	18390533	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2248 2250 +
ChrX	stalkie_big_nohaplotig	exon	18415909	18415915	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2237 2243 +
ChrX	stalkie_big_nohaplotig	exon	18433336	18433347	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2211 2222 +
ChrX	stalkie_big_nohaplotig	exon	18441426	18441427	50	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2209 2210 +
ChrX	stalkie_big_nohaplotig	exon	18460347	18460349	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2206 2208 +
ChrX	stalkie_big_nohaplotig	exon	18472167	18472169	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2203 2205 +
ChrX	stalkie_big_nohaplotig	exon	18519964	18519974	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2188 2198 +
ChrX	stalkie_big_nohaplotig	exon	18536236	18536237	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2186 2187 +
ChrX	stalkie_big_nohaplotig	exon	18542013	18542022	80	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2176 2185 +
ChrX	stalkie_big_nohaplotig	exon	18559747	18559758	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2158 2169 +
ChrX	stalkie_big_nohaplotig	exon	18560003	18560033	35	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2146 2157 +
ChrX	stalkie_big_nohaplotig	exon	18560132	18560135	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2142 2145 +
ChrX	stalkie_big_nohaplotig	exon	18560193	18560214	68	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2126 2141 +
ChrX	stalkie_big_nohaplotig	exon	18575327	18575334	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2092 2099 +
ChrX	stalkie_big_nohaplotig	exon	18575344	18575349	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2074 2079 +
ChrX	stalkie_big_nohaplotig	exon	18581953	18581956	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2070 2073 +
ChrX	stalkie_big_nohaplotig	exon	18586443	18586447	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2065 2069 +
ChrX	stalkie_big_nohaplotig	exon	18592228	18592235	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2057 2064 +
ChrX	stalkie_big_nohaplotig	exon	18600506	18600516	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2033 2043 +
ChrX	stalkie_big_nohaplotig	exon	18602098	18602100	66	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2030 2032 +
ChrX	stalkie_big_nohaplotig	exon	18609399	18609411	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 2015 2027 +
ChrX	stalkie_big_nohaplotig	exon	18610553	18610561	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 1973 1981 +
ChrX	stalkie_big_nohaplotig	exon	18612142	18612154	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 1911 1923 +
ChrX	stalkie_big_nohaplotig	exon	18619233	18619238	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 1905 1910 +
ChrX	stalkie_big_nohaplotig	exon	18625703	18625710	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 1897 1904 +
ChrX	stalkie_big_nohaplotig	exon	18630075	18630076	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 1895 1896 +
ChrX	stalkie_big_nohaplotig	exon	18630131	18630139	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 1835 1843 +
ChrX	stalkie_big_nohaplotig	exon	18630686	18630692	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 1828 1834 +
ChrX	stalkie_big_nohaplotig	exon	18631453	18631460	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 1805 1812 +
ChrX	stalkie_big_nohaplotig	exon	18642459	18642467	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 1775 1783 +
ChrX	stalkie_big_nohaplotig	exon	18648897	18648899	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 1772 1774 +
ChrX	stalkie_big_nohaplotig	exon	18656080	18656090	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 1761 1771 +
ChrX	stalkie_big_nohaplotig	exon	18680336	18680345	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 1646 1655 +
ChrX	stalkie_big_nohaplotig	exon	18686607	18686613	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 1639 1645 +
ChrX	stalkie_big_nohaplotig	exon	18688931	18688940	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 1614 1623 +
ChrX	stalkie_big_nohaplotig	exon	18703715	18703851	100	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 1456 1592 +
ChrX	stalkie_big_nohaplotig	exon	18742830	18744231	99	-	.	Parent=comp162710_c1_seq1.mrna1;Target=comp162710_c1_seq1 54 1455 +
ChrX	stalkie_big_nohaplotig	CDS	18743870	18744112	.	-	0	Parent=comp162710_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18414489	18419582	.	-	.	ID=ORF222.mrna1;geneID=ORF222.path1;Name=ORF222;Dir=sensecoverage=100.0;identity=99.6;matches=2355;mismatches=9;indels=0;unknowns=0;locus=RLOC_00001081
ChrX	stalkie_big_nohaplotig	exon	18414489	18416779	99	-	.	Parent=ORF222.mrna1;Target=ORF222 74 2364 +
ChrX	stalkie_big_nohaplotig	exon	18419510	18419582	100	-	.	Parent=ORF222.mrna1;Target=ORF222 1 73 +
ChrX	stalkie_big_nohaplotig	CDS	18414489	18416779	.	-	2	Parent=ORF222.mrna1;Target=ORF222 74 2364 +
ChrX	stalkie_big_nohaplotig	CDS	18419510	18419582	.	-	0	Parent=ORF222.mrna1;Target=ORF222 1 73 +
ChrX	gffcl	locus	18399951	18400814	.	+	.	ID=RLOC_00001082;geneIDs=ORF2411.path1;transcripts=ORF2411.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18399951	18400814	.	+	.	ID=ORF2411.mrna1;geneID=ORF2411.path1;Name=ORF2411;Dir=indeterminatecoverage=100.0;identity=100.0;matches=864;mismatches=0;indels=0;unknowns=0;Target=ORF2411 864 1 .;locus=RLOC_00001082
ChrX	stalkie_big_nohaplotig	exon	18399951	18400814	100	+	.	Parent=ORF2411.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18399951	18400814	.	+	0	Parent=ORF2411.mrna1
ChrX	gffcl	locus	18409331	18410636	.	+	.	ID=RLOC_00001083;geneIDs=comp151013_c0_seq1.path1;transcripts=comp151013_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18409331	18410636	.	+	.	ID=comp151013_c0_seq1.mrna1;geneID=comp151013_c0_seq1.path1;Name=comp151013_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=997;mismatches=3;indels=1;unknowns=0;Target=comp151013_c0_seq1 205 330 +;locus=RLOC_00001083
ChrX	stalkie_big_nohaplotig	exon	18409331	18409909	99	+	.	Parent=comp151013_c0_seq1.mrna1;Target=comp151013_c0_seq1 1 580 +
ChrX	stalkie_big_nohaplotig	exon	18410216	18410636	99	+	.	Parent=comp151013_c0_seq1.mrna1;Target=comp151013_c0_seq1 581 1001 +
ChrX	stalkie_big_nohaplotig	CDS	18409535	18409659	.	+	0	Parent=comp151013_c0_seq1.mrna1
ChrX	gffcl	locus	18424762	18425153	.	-	.	ID=RLOC_00001084;geneIDs=comp144582_c0_seq1.path1;transcripts=comp144582_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18424762	18425153	.	-	.	ID=comp144582_c0_seq1.mrna1;geneID=comp144582_c0_seq1.path1;Name=comp144582_c0_seq1;Dir=indeterminatecoverage=69.9;identity=100.0;matches=392;mismatches=0;indels=0;unknowns=0;Target=comp144582_c0_seq1 392 1 .;CDS_Target=comp144582_c0_seq1 351 202 .;locus=RLOC_00001084
ChrX	stalkie_big_nohaplotig	exon	18424762	18425153	100	-	.	Parent=comp144582_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18424803	18424952	.	-	0	Parent=comp144582_c0_seq1.mrna1
ChrX	gffcl	locus	18426661	18427829	.	+	.	ID=RLOC_00001085;geneIDs=comp160673_c0_seq1.path1;transcripts=comp160673_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18426661	18427829	.	+	.	ID=comp160673_c0_seq1.mrna1;geneID=comp160673_c0_seq1.path1;Name=comp160673_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1168;mismatches=1;indels=0;unknowns=0;Target=comp160673_c0_seq1 1169 1 .;CDS_Target=comp160673_c0_seq1 990 880 .;locus=RLOC_00001085
ChrX	stalkie_big_nohaplotig	exon	18426661	18427829	99	+	.	Parent=comp160673_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18427540	18427650	.	+	0	Parent=comp160673_c0_seq1.mrna1
ChrX	gffcl	locus	18428976	18446416	.	-	.	ID=RLOC_00001086;geneIDs=FBgn0031306.1.path1;transcripts=FBgn0031306.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18428976	18446416	.	-	.	ID=FBgn0031306.1.mrna1;geneID=FBgn0031306.1.path1;Name=FBgn0031306.1;Dir=sensecoverage=100.0;identity=100.0;matches=813;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001086
ChrX	stalkie_big_nohaplotig	exon	18428976	18429070	100	-	.	Parent=FBgn0031306.1.mrna1;Target=FBgn0031306.1 719 813 +
ChrX	stalkie_big_nohaplotig	exon	18431377	18431708	100	-	.	Parent=FBgn0031306.1.mrna1;Target=FBgn0031306.1 387 718 +
ChrX	stalkie_big_nohaplotig	exon	18445924	18446107	100	-	.	Parent=FBgn0031306.1.mrna1;Target=FBgn0031306.1 203 386 +
ChrX	stalkie_big_nohaplotig	exon	18446215	18446416	100	-	.	Parent=FBgn0031306.1.mrna1;Target=FBgn0031306.1 1 202 +
ChrX	stalkie_big_nohaplotig	CDS	18428976	18429070	.	-	2	Parent=FBgn0031306.1.mrna1;Target=FBgn0031306.1 719 813 +
ChrX	stalkie_big_nohaplotig	CDS	18431377	18431708	.	-	1	Parent=FBgn0031306.1.mrna1;Target=FBgn0031306.1 387 718 +
ChrX	stalkie_big_nohaplotig	CDS	18445924	18446107	.	-	2	Parent=FBgn0031306.1.mrna1;Target=FBgn0031306.1 203 386 +
ChrX	stalkie_big_nohaplotig	CDS	18446215	18446416	.	-	0	Parent=FBgn0031306.1.mrna1;Target=FBgn0031306.1 1 202 +
ChrX	gffcl	locus	18446620	18446904	.	-	.	ID=RLOC_00001087;geneIDs=comp150906_c0_seq1.path2;transcripts=comp150906_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	18446620	18446904	.	-	.	ID=comp150906_c0_seq1.mrna2;geneID=comp150906_c0_seq1.path2;Name=comp150906_c0_seq1;Dir=indeterminatecoverage=30.3;identity=100.0;matches=285;mismatches=0;indels=0;unknowns=0;Target=comp150906_c0_seq1 942 658 .;CDS_Target=comp150906_c0_seq1 941 714 .;locus=RLOC_00001087
ChrX	stalkie_big_nohaplotig	exon	18446620	18446904	100	-	.	Parent=comp150906_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	18446621	18446848	.	-	0	Parent=comp150906_c0_seq1.mrna2
ChrX	gffcl	locus	18490650	18492561	.	.	.	ID=RLOC_00001088;geneIDs=comp74663_c0_seq1.path1,comp156084_c1_seq1.path1;transcripts=comp156084_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18490650	18492010	.	-	.	ID=comp156084_c1_seq1.mrna1;geneID=comp156084_c1_seq1.path1;Name=comp156084_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1357;mismatches=4;indels=0;unknowns=0;Target=comp156084_c1_seq1 1361 1 .;CDS_Target=comp156084_c1_seq1 1109 897 .;locus=RLOC_00001088
ChrX	stalkie_big_nohaplotig	exon	18490650	18492010	99	-	.	Parent=comp156084_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18490902	18491114	.	-	0	Parent=comp156084_c1_seq1.mrna1
ChrX	gffcl	locus	18494383	18494981	.	-	.	ID=RLOC_00001089;geneIDs=comp105825_c0_seq1.path2;transcripts=comp105825_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	18494383	18494981	.	-	.	ID=comp105825_c0_seq1.mrna2;geneID=comp105825_c0_seq1.path2;Name=comp105825_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=599;mismatches=0;indels=0;unknowns=0;Target=comp105825_c0_seq1 599 1 .;CDS_Target=comp105825_c0_seq1 539 435 .;locus=RLOC_00001089
ChrX	stalkie_big_nohaplotig	exon	18494383	18494981	100	-	.	Parent=comp105825_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	18494443	18494547	.	-	0	Parent=comp105825_c0_seq1.mrna2
ChrX	gffcl	locus	18509831	18617947	.	+	.	ID=RLOC_00001090;geneIDs=FBgn0016926.1.path1;transcripts=FBgn0016926.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18509831	18617947	.	+	.	ID=FBgn0016926.1.mrna1;geneID=FBgn0016926.1.path1;Name=FBgn0016926.1;Dir=sensecoverage=99.6;identity=100.0;matches=786;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001090
ChrX	stalkie_big_nohaplotig	exon	18509831	18509993	100	+	.	Parent=FBgn0016926.1.mrna1;Target=FBgn0016926.1 4 166 +
ChrX	stalkie_big_nohaplotig	exon	18612384	18612447	100	+	.	Parent=FBgn0016926.1.mrna1;Target=FBgn0016926.1 167 230 +
ChrX	stalkie_big_nohaplotig	exon	18617325	18617574	100	+	.	Parent=FBgn0016926.1.mrna1;Target=FBgn0016926.1 231 480 +
ChrX	stalkie_big_nohaplotig	exon	18617639	18617947	100	+	.	Parent=FBgn0016926.1.mrna1;Target=FBgn0016926.1 481 789 +
ChrX	stalkie_big_nohaplotig	CDS	18509831	18509993	.	+	0	Parent=FBgn0016926.1.mrna1;Target=FBgn0016926.1 4 166 +
ChrX	stalkie_big_nohaplotig	CDS	18612384	18612447	.	+	2	Parent=FBgn0016926.1.mrna1;Target=FBgn0016926.1 167 230 +
ChrX	stalkie_big_nohaplotig	CDS	18617325	18617574	.	+	1	Parent=FBgn0016926.1.mrna1;Target=FBgn0016926.1 231 480 +
ChrX	stalkie_big_nohaplotig	CDS	18617639	18617947	.	+	0	Parent=FBgn0016926.1.mrna1;Target=FBgn0016926.1 481 789 +
ChrX	gffcl	locus	18517965	18535649	.	-	.	ID=RLOC_00001091;geneIDs=comp146824_c0_seq1.path1;transcripts=comp146824_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18517965	18535649	.	-	.	ID=comp146824_c0_seq1.mrna1;geneID=comp146824_c0_seq1.path1;Name=comp146824_c0_seq1;Dir=sensecoverage=98.5;identity=98.5;matches=652;mismatches=4;indels=6;unknowns=0;Target=comp146824_c0_seq1 246 374 +;locus=RLOC_00001091
ChrX	stalkie_big_nohaplotig	exon	18517965	18518206	99	-	.	Parent=comp146824_c0_seq1.mrna1;Target=comp146824_c0_seq1 425 666 +
ChrX	stalkie_big_nohaplotig	exon	18535230	18535649	97	-	.	Parent=comp146824_c0_seq1.mrna1;Target=comp146824_c0_seq1 11 424 +
ChrX	stalkie_big_nohaplotig	CDS	18535280	18535408	.	-	0	Parent=comp146824_c0_seq1.mrna1
ChrX	gffcl	locus	18611038	18676773	.	+	.	ID=RLOC_00001092;geneIDs=comp147589_c0_seq1.path4;transcripts=comp147589_c0_seq1.mrna4
ChrX	stalkie_big_nohaplotig	mRNA	18611038	18676773	.	+	.	ID=comp147589_c0_seq1.mrna4;geneID=comp147589_c0_seq1.path4;Name=comp147589_c0_seq1;Dir=indeterminatecoverage=95.7;identity=97.1;matches=1055;mismatches=20;indels=11;unknowns=0;Target=comp147589_c0_seq1 874 2 .;locus=RLOC_00001092
ChrX	stalkie_big_nohaplotig	exon	18611038	18612025	98	+	.	Parent=comp147589_c0_seq1.mrna4;Target=comp147589_c0_seq1 990 1 .
ChrX	stalkie_big_nohaplotig	exon	18612813	18612819	100	+	.	Parent=comp147589_c0_seq1.mrna4;Target=comp147589_c0_seq1 997 991 .
ChrX	stalkie_big_nohaplotig	exon	18619176	18619184	77	+	.	Parent=comp147589_c0_seq1.mrna4;Target=comp147589_c0_seq1 1006 998 .
ChrX	stalkie_big_nohaplotig	exon	18646509	18646514	100	+	.	Parent=comp147589_c0_seq1.mrna4;Target=comp147589_c0_seq1 1012 1007 .
ChrX	stalkie_big_nohaplotig	exon	18647361	18647403	55	+	.	Parent=comp147589_c0_seq1.mrna4;Target=comp147589_c0_seq1 1046 1013 .
ChrX	stalkie_big_nohaplotig	exon	18654270	18654280	100	+	.	Parent=comp147589_c0_seq1.mrna4;Target=comp147589_c0_seq1 1057 1047 .
ChrX	stalkie_big_nohaplotig	exon	18656398	18656403	100	+	.	Parent=comp147589_c0_seq1.mrna4;Target=comp147589_c0_seq1 1063 1058 .
ChrX	stalkie_big_nohaplotig	exon	18670280	18670287	100	+	.	Parent=comp147589_c0_seq1.mrna4;Target=comp147589_c0_seq1 1071 1064 .
ChrX	stalkie_big_nohaplotig	exon	18676768	18676773	100	+	.	Parent=comp147589_c0_seq1.mrna4;Target=comp147589_c0_seq1 1083 1078 .
ChrX	stalkie_big_nohaplotig	CDS	18611039	18611909	.	+	0	Parent=comp147589_c0_seq1.mrna4
ChrX	gffcl	locus	18621506	18622365	.	+	.	ID=RLOC_00001093;geneIDs=comp147326_c0_seq1.path1;transcripts=comp147326_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18621506	18622365	.	+	.	ID=comp147326_c0_seq1.mrna1;geneID=comp147326_c0_seq1.path1;Name=comp147326_c0_seq1;Dir=sensecoverage=99.9;identity=100.0;matches=776;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001093
ChrX	stalkie_big_nohaplotig	exon	18621506	18621907	100	+	.	Parent=comp147326_c0_seq1.mrna1;Target=comp147326_c0_seq1 1 402 +
ChrX	stalkie_big_nohaplotig	exon	18621975	18622326	100	+	.	Parent=comp147326_c0_seq1.mrna1;Target=comp147326_c0_seq1 403 754 +
ChrX	stalkie_big_nohaplotig	exon	18622344	18622365	100	+	.	Parent=comp147326_c0_seq1.mrna1;Target=comp147326_c0_seq1 761 782 +
ChrX	stalkie_big_nohaplotig	CDS	18621729	18621907	.	+	0	Parent=comp147326_c0_seq1.mrna1;Target=comp147326_c0_seq1 224 402 +
ChrX	stalkie_big_nohaplotig	CDS	18621975	18622038	.	+	1	Parent=comp147326_c0_seq1.mrna1;Target=comp147326_c0_seq1 403 466 +
ChrX	gffcl	locus	18625074	18625589	.	-	.	ID=RLOC_00001095;geneIDs=comp150230_c0_seq1.path1;transcripts=comp150230_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18625074	18625589	.	-	.	ID=comp150230_c0_seq1.mrna1;geneID=comp150230_c0_seq1.path1;Name=comp150230_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.2;matches=512;mismatches=4;indels=0;unknowns=0;Target=comp150230_c0_seq1 517 2 .;CDS_Target=comp150230_c0_seq1 211 152 .;locus=RLOC_00001095
ChrX	stalkie_big_nohaplotig	exon	18625074	18625589	99	-	.	Parent=comp150230_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18625380	18625439	.	-	0	Parent=comp150230_c0_seq1.mrna1
ChrX	gffcl	locus	18626914	18631649	.	+	.	ID=RLOC_00001096;geneIDs=FBgn0264297.1.path1;transcripts=FBgn0264297.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18626914	18631649	.	+	.	ID=FBgn0264297.1.mrna1;geneID=FBgn0264297.1.path1;Name=FBgn0264297.1;Dir=sensecoverage=100.0;identity=99.9;matches=797;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001096
ChrX	stalkie_big_nohaplotig	exon	18626914	18627081	100	+	.	Parent=FBgn0264297.1.mrna1;Target=FBgn0264297.1 1 168 +
ChrX	stalkie_big_nohaplotig	exon	18628841	18629217	100	+	.	Parent=FBgn0264297.1.mrna1;Target=FBgn0264297.1 169 545 +
ChrX	stalkie_big_nohaplotig	exon	18631299	18631391	98	+	.	Parent=FBgn0264297.1.mrna1;Target=FBgn0264297.1 546 638 +
ChrX	stalkie_big_nohaplotig	exon	18631490	18631649	100	+	.	Parent=FBgn0264297.1.mrna1;Target=FBgn0264297.1 639 798 +
ChrX	stalkie_big_nohaplotig	CDS	18626914	18627081	.	+	0	Parent=FBgn0264297.1.mrna1;Target=FBgn0264297.1 1 168 +
ChrX	stalkie_big_nohaplotig	CDS	18628841	18629217	.	+	0	Parent=FBgn0264297.1.mrna1;Target=FBgn0264297.1 169 545 +
ChrX	stalkie_big_nohaplotig	CDS	18631299	18631391	.	+	1	Parent=FBgn0264297.1.mrna1;Target=FBgn0264297.1 546 638 +
ChrX	stalkie_big_nohaplotig	CDS	18631490	18631649	.	+	1	Parent=FBgn0264297.1.mrna1;Target=FBgn0264297.1 639 798 +
ChrX	gffcl	locus	18634962	18637044	.	+	.	ID=RLOC_00001097;geneIDs=comp130127_c0_seq1.path1;transcripts=comp130127_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18634962	18637044	.	+	.	ID=comp130127_c0_seq1.mrna1;geneID=comp130127_c0_seq1.path1;Name=comp130127_c0_seq1;Dir=antisensecoverage=98.5;identity=100.0;matches=980;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001097
ChrX	stalkie_big_nohaplotig	exon	18634962	18635151	100	+	.	Parent=comp130127_c0_seq1.mrna1;Target=comp130127_c0_seq1 791 980 -
ChrX	stalkie_big_nohaplotig	exon	18636115	18636182	100	+	.	Parent=comp130127_c0_seq1.mrna1;Target=comp130127_c0_seq1 723 790 -
ChrX	stalkie_big_nohaplotig	exon	18636251	18636656	100	+	.	Parent=comp130127_c0_seq1.mrna1;Target=comp130127_c0_seq1 317 722 -
ChrX	stalkie_big_nohaplotig	exon	18636729	18637044	100	+	.	Parent=comp130127_c0_seq1.mrna1;Target=comp130127_c0_seq1 1 316 -
ChrX	stalkie_big_nohaplotig	CDS	18636159	18636182	.	+	0	Parent=comp130127_c0_seq1.mrna1;Target=comp130127_c0_seq1 723 746 .
ChrX	stalkie_big_nohaplotig	CDS	18636251	18636625	.	+	0	Parent=comp130127_c0_seq1.mrna1;Target=comp130127_c0_seq1 348 722 .
ChrX	gffcl	locus	18648229	18690836	.	+	.	ID=RLOC_00001098;geneIDs=FBgn0085380.1.path1;transcripts=FBgn0085380.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18648229	18690836	.	+	.	ID=FBgn0085380.1.mrna1;geneID=FBgn0085380.1.path1;Name=FBgn0085380.1;Dir=sensecoverage=100.0;identity=100.0;matches=705;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001098
ChrX	stalkie_big_nohaplotig	exon	18648229	18648342	100	+	.	Parent=FBgn0085380.1.mrna1;Target=FBgn0085380.1 1 114 +
ChrX	stalkie_big_nohaplotig	exon	18666881	18667047	100	+	.	Parent=FBgn0085380.1.mrna1;Target=FBgn0085380.1 115 281 +
ChrX	stalkie_big_nohaplotig	exon	18679078	18679214	100	+	.	Parent=FBgn0085380.1.mrna1;Target=FBgn0085380.1 282 418 +
ChrX	stalkie_big_nohaplotig	exon	18686097	18686273	100	+	.	Parent=FBgn0085380.1.mrna1;Target=FBgn0085380.1 419 595 +
ChrX	stalkie_big_nohaplotig	exon	18690727	18690836	100	+	.	Parent=FBgn0085380.1.mrna1;Target=FBgn0085380.1 596 705 +
ChrX	stalkie_big_nohaplotig	CDS	18648229	18648342	.	+	0	Parent=FBgn0085380.1.mrna1;Target=FBgn0085380.1 1 114 +
ChrX	stalkie_big_nohaplotig	CDS	18666881	18667047	.	+	0	Parent=FBgn0085380.1.mrna1;Target=FBgn0085380.1 115 281 +
ChrX	stalkie_big_nohaplotig	CDS	18679078	18679214	.	+	1	Parent=FBgn0085380.1.mrna1;Target=FBgn0085380.1 282 418 +
ChrX	stalkie_big_nohaplotig	CDS	18686097	18686273	.	+	2	Parent=FBgn0085380.1.mrna1;Target=FBgn0085380.1 419 595 +
ChrX	stalkie_big_nohaplotig	CDS	18690727	18690836	.	+	2	Parent=FBgn0085380.1.mrna1;Target=FBgn0085380.1 596 705 +
ChrX	gffcl	locus	18691447	18693151	.	+	.	ID=RLOC_00001099;geneIDs=comp145535_c0_seq1.path1;transcripts=comp145535_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18691447	18693151	.	+	.	ID=comp145535_c0_seq1.mrna1;geneID=comp145535_c0_seq1.path1;Name=comp145535_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.8;matches=1702;mismatches=3;indels=0;unknowns=0;Target=comp145535_c0_seq1 1705 1 .;CDS_Target=comp145535_c0_seq1 1089 862 .;locus=RLOC_00001099
ChrX	stalkie_big_nohaplotig	exon	18691447	18693151	99	+	.	Parent=comp145535_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18692308	18692535	.	+	0	Parent=comp145535_c0_seq1.mrna1
ChrX	gffcl	locus	18693213	18694329	.	+	.	ID=RLOC_00001100;geneIDs=comp140476_c0_seq1.path1,comp142370_c0_seq1.path1;transcripts=comp140476_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18693213	18693972	.	+	.	ID=comp140476_c0_seq1.mrna1;geneID=comp140476_c0_seq1.path1;Name=comp140476_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=752;mismatches=2;indels=6;unknowns=0;Target=comp140476_c0_seq1 754 1 .;CDS_Target=comp140476_c0_seq1 302 249 .;locus=RLOC_00001100
ChrX	stalkie_big_nohaplotig	exon	18693213	18693972	98	+	.	Parent=comp140476_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18693461	18693514	.	+	0	Parent=comp140476_c0_seq1.mrna1
ChrX	gffcl	locus	18694551	18695213	.	-	.	ID=RLOC_00001101;geneIDs=comp142635_c0_seq1.path1;transcripts=comp142635_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18694551	18695213	.	-	.	ID=comp142635_c0_seq1.mrna1;geneID=comp142635_c0_seq1.path1;Name=comp142635_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=663;mismatches=0;indels=0;unknowns=0;Target=comp142635_c0_seq1 663 1 .;CDS_Target=comp142635_c0_seq1 653 498 .;locus=RLOC_00001101
ChrX	stalkie_big_nohaplotig	exon	18694551	18695213	100	-	.	Parent=comp142635_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18694561	18694716	.	-	0	Parent=comp142635_c0_seq1.mrna1
ChrX	gffcl	locus	18695584	18696006	.	-	.	ID=RLOC_00001102;geneIDs=comp118680_c0_seq1.path1;transcripts=comp118680_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18695584	18696006	.	-	.	ID=comp118680_c0_seq1.mrna1;geneID=comp118680_c0_seq1.path1;Name=comp118680_c0_seq1;Dir=indeterminatecoverage=90.6;identity=100.0;matches=423;mismatches=0;indels=0;unknowns=0;Target=comp118680_c0_seq1 462 40 .;CDS_Target=comp118680_c0_seq1 131 42 .;locus=RLOC_00001102
ChrX	stalkie_big_nohaplotig	exon	18695584	18696006	100	-	.	Parent=comp118680_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18695915	18696004	.	-	0	Parent=comp118680_c0_seq1.mrna1
ChrX	gffcl	locus	18696051	18696340	.	-	.	ID=RLOC_00001103;geneIDs=comp66652_c0_seq1.path1;transcripts=comp66652_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18696051	18696340	.	-	.	ID=comp66652_c0_seq1.mrna1;geneID=comp66652_c0_seq1.path1;Name=comp66652_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=290;mismatches=0;indels=0;unknowns=0;Target=comp66652_c0_seq1 290 1 .;CDS_Target=comp66652_c0_seq1 241 134 .;locus=RLOC_00001103
ChrX	stalkie_big_nohaplotig	exon	18696051	18696340	100	-	.	Parent=comp66652_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18696100	18696207	.	-	0	Parent=comp66652_c0_seq1.mrna1
ChrX	gffcl	locus	18697094	18699524	.	-	.	ID=RLOC_00001104;geneIDs=comp114591_c0_seq1.path1,comp160494_c1_seq1.path1;transcripts=comp160494_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18697094	18699088	.	-	.	ID=comp160494_c1_seq1.mrna1;geneID=comp160494_c1_seq1.path1;Name=comp160494_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1984;mismatches=7;indels=4;unknowns=0;Target=comp160494_c1_seq1 1991 1 .;CDS_Target=comp160494_c1_seq1 1395 1387 .;locus=RLOC_00001104
ChrX	stalkie_big_nohaplotig	exon	18697094	18699088	99	-	.	Parent=comp160494_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18697690	18697702	.	-	0	Parent=comp160494_c1_seq1.mrna1
ChrX	gffcl	locus	18722625	18723409	.	-	.	ID=RLOC_00001105;geneIDs=comp150580_c0_seq1.path1;transcripts=comp150580_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18722625	18723409	.	-	.	ID=comp150580_c0_seq1.mrna1;geneID=comp150580_c0_seq1.path1;Name=comp150580_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.5;matches=781;mismatches=4;indels=0;unknowns=0;Target=comp150580_c0_seq1 785 1 .;CDS_Target=comp150580_c0_seq1 582 448 .;locus=RLOC_00001105
ChrX	stalkie_big_nohaplotig	exon	18722625	18723409	99	-	.	Parent=comp150580_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18722828	18722962	.	-	0	Parent=comp150580_c0_seq1.mrna1
ChrX	gffcl	locus	18738134	18738948	.	-	.	ID=RLOC_00001106;geneIDs=comp156082_c0_seq1.path1;transcripts=comp156082_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18738134	18738948	.	-	.	ID=comp156082_c0_seq1.mrna1;geneID=comp156082_c0_seq1.path1;Name=comp156082_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=808;mismatches=3;indels=4;unknowns=0;Target=comp156082_c0_seq1 811 1 .;CDS_Target=comp156082_c0_seq1 52 2 .;locus=RLOC_00001106
ChrX	stalkie_big_nohaplotig	exon	18738134	18738948	99	-	.	Parent=comp156082_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18738893	18738947	.	-	0	Parent=comp156082_c0_seq1.mrna1
ChrX	gffcl	locus	18745504	18746651	.	+	.	ID=RLOC_00001107;geneIDs=comp142801_c0_seq1.path1;transcripts=comp142801_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18745504	18746651	.	+	.	ID=comp142801_c0_seq1.mrna1;geneID=comp142801_c0_seq1.path1;Name=comp142801_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1146;mismatches=2;indels=8;unknowns=0;Target=comp142801_c0_seq1 1156 1 .;CDS_Target=comp142801_c0_seq1 1010 804 .;locus=RLOC_00001107
ChrX	stalkie_big_nohaplotig	exon	18745504	18746651	99	+	.	Parent=comp142801_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18746299	18746505	.	+	0	Parent=comp142801_c0_seq1.mrna1
ChrX	gffcl	locus	18748989	18751642	.	+	.	ID=RLOC_00001108;geneIDs=FBgn0015245.2.path1;transcripts=FBgn0015245.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18748989	18751642	.	+	.	ID=FBgn0015245.2.mrna1;geneID=FBgn0015245.2.path1;Name=FBgn0015245.2;Dir=sensecoverage=100.0;identity=100.0;matches=1761;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001108
ChrX	stalkie_big_nohaplotig	exon	18748989	18749021	100	+	.	Parent=FBgn0015245.2.mrna1;Target=FBgn0015245.2 1 33 +
ChrX	stalkie_big_nohaplotig	exon	18749794	18751164	100	+	.	Parent=FBgn0015245.2.mrna1;Target=FBgn0015245.2 34 1404 +
ChrX	stalkie_big_nohaplotig	exon	18751231	18751416	100	+	.	Parent=FBgn0015245.2.mrna1;Target=FBgn0015245.2 1405 1590 +
ChrX	stalkie_big_nohaplotig	exon	18751472	18751642	100	+	.	Parent=FBgn0015245.2.mrna1;Target=FBgn0015245.2 1591 1761 +
ChrX	stalkie_big_nohaplotig	CDS	18748989	18749021	.	+	0	Parent=FBgn0015245.2.mrna1;Target=FBgn0015245.2 1 33 +
ChrX	stalkie_big_nohaplotig	CDS	18749794	18751164	.	+	0	Parent=FBgn0015245.2.mrna1;Target=FBgn0015245.2 34 1404 +
ChrX	stalkie_big_nohaplotig	CDS	18751231	18751416	.	+	0	Parent=FBgn0015245.2.mrna1;Target=FBgn0015245.2 1405 1590 +
ChrX	stalkie_big_nohaplotig	CDS	18751472	18751642	.	+	0	Parent=FBgn0015245.2.mrna1;Target=FBgn0015245.2 1591 1761 +
ChrX	gffcl	locus	18760261	18760526	.	-	.	ID=RLOC_00001109;geneIDs=comp149874_c0_seq1.path1;transcripts=comp149874_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18760261	18760526	.	-	.	ID=comp149874_c0_seq1.mrna1;geneID=comp149874_c0_seq1.path1;Name=comp149874_c0_seq1;Dir=indeterminatecoverage=93.7;identity=98.1;matches=261;mismatches=5;indels=0;unknowns=0;Target=comp149874_c0_seq1 266 1 .;CDS_Target=comp149874_c0_seq1 218 117 .;locus=RLOC_00001109
ChrX	stalkie_big_nohaplotig	exon	18760261	18760526	98	-	.	Parent=comp149874_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18760309	18760410	.	-	0	Parent=comp149874_c0_seq1.mrna1
ChrX	gffcl	locus	18797340	18799309	.	-	.	ID=RLOC_00001110;geneIDs=comp157812_c0_seq1.path1;transcripts=comp157812_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18797340	18799309	.	-	.	ID=comp157812_c0_seq1.mrna1;geneID=comp157812_c0_seq1.path1;Name=comp157812_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=1961;mismatches=4;indels=32;unknowns=0;Target=comp157812_c0_seq1 1992 1 .;CDS_Target=comp157812_c0_seq1 1514 1302 .;locus=RLOC_00001110
ChrX	stalkie_big_nohaplotig	exon	18797340	18799309	98	-	.	Parent=comp157812_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18797796	18798008	.	-	0	Parent=comp157812_c0_seq1.mrna1
ChrX	gffcl	locus	18800703	18803320	.	-	.	ID=RLOC_00001111;geneIDs=FBgn0032700.1.path1;transcripts=FBgn0032700.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18800703	18803320	.	-	.	ID=FBgn0032700.1.mrna1;geneID=FBgn0032700.1.path1;Name=FBgn0032700.1;Dir=sensecoverage=100.0;identity=100.0;matches=1332;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001111
ChrX	stalkie_big_nohaplotig	exon	18800703	18800761	100	-	.	Parent=FBgn0032700.1.mrna1;Target=FBgn0032700.1 1274 1332 +
ChrX	stalkie_big_nohaplotig	exon	18800825	18801158	100	-	.	Parent=FBgn0032700.1.mrna1;Target=FBgn0032700.1 940 1273 +
ChrX	stalkie_big_nohaplotig	exon	18801214	18801370	100	-	.	Parent=FBgn0032700.1.mrna1;Target=FBgn0032700.1 783 939 +
ChrX	stalkie_big_nohaplotig	exon	18802255	18802405	100	-	.	Parent=FBgn0032700.1.mrna1;Target=FBgn0032700.1 632 782 +
ChrX	stalkie_big_nohaplotig	exon	18802473	18802772	100	-	.	Parent=FBgn0032700.1.mrna1;Target=FBgn0032700.1 332 631 +
ChrX	stalkie_big_nohaplotig	exon	18802912	18803094	100	-	.	Parent=FBgn0032700.1.mrna1;Target=FBgn0032700.1 149 331 +
ChrX	stalkie_big_nohaplotig	exon	18803173	18803320	100	-	.	Parent=FBgn0032700.1.mrna1;Target=FBgn0032700.1 1 148 +
ChrX	stalkie_big_nohaplotig	CDS	18800703	18800761	.	-	2	Parent=FBgn0032700.1.mrna1;Target=FBgn0032700.1 1274 1332 +
ChrX	stalkie_big_nohaplotig	CDS	18800825	18801158	.	-	0	Parent=FBgn0032700.1.mrna1;Target=FBgn0032700.1 940 1273 +
ChrX	stalkie_big_nohaplotig	CDS	18801214	18801370	.	-	1	Parent=FBgn0032700.1.mrna1;Target=FBgn0032700.1 783 939 +
ChrX	stalkie_big_nohaplotig	CDS	18802255	18802405	.	-	2	Parent=FBgn0032700.1.mrna1;Target=FBgn0032700.1 632 782 +
ChrX	stalkie_big_nohaplotig	CDS	18802473	18802772	.	-	2	Parent=FBgn0032700.1.mrna1;Target=FBgn0032700.1 332 631 +
ChrX	stalkie_big_nohaplotig	CDS	18802912	18803094	.	-	2	Parent=FBgn0032700.1.mrna1;Target=FBgn0032700.1 149 331 +
ChrX	stalkie_big_nohaplotig	CDS	18803173	18803320	.	-	0	Parent=FBgn0032700.1.mrna1;Target=FBgn0032700.1 1 148 +
ChrX	gffcl	locus	18808017	18808184	.	-	.	ID=RLOC_00001112;geneIDs=comp87396_c0_seq1.path1;transcripts=comp87396_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18808017	18808184	.	-	.	ID=comp87396_c0_seq1.mrna1;geneID=comp87396_c0_seq1.path1;Name=comp87396_c0_seq1;Dir=indeterminatecoverage=70.9;identity=99.4;matches=167;mismatches=1;indels=0;unknowns=0;Target=comp87396_c0_seq1 218 51 .;CDS_Target=comp87396_c0_seq1 164 51 .;locus=RLOC_00001112
ChrX	stalkie_big_nohaplotig	exon	18808017	18808184	99	-	.	Parent=comp87396_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18808071	18808184	.	-	0	Parent=comp87396_c0_seq1.mrna1
ChrX	gffcl	locus	18810269	18811750	.	-	.	ID=RLOC_00001113;geneIDs=FBgn0032702.1.path1;transcripts=FBgn0032702.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18810269	18811750	.	-	.	ID=FBgn0032702.1.mrna1;geneID=FBgn0032702.1.path1;Name=FBgn0032702.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1482;mismatches=0;indels=0;unknowns=0;Target=FBgn0032702.1 1482 1 .;locus=RLOC_00001113
ChrX	stalkie_big_nohaplotig	exon	18810269	18811750	100	-	.	Parent=FBgn0032702.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18810269	18811750	.	-	0	Parent=FBgn0032702.1.mrna1
ChrX	gffcl	locus	18814641	18817077	.	-	.	ID=RLOC_00001114;geneIDs=FBgn0032701.1.path1;transcripts=FBgn0032701.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18814641	18817077	.	-	.	ID=FBgn0032701.1.mrna1;geneID=FBgn0032701.1.path1;Name=FBgn0032701.1;Dir=sensecoverage=100.0;identity=99.6;matches=2372;mismatches=7;indels=3;unknowns=0;locus=RLOC_00001114
ChrX	stalkie_big_nohaplotig	exon	18814641	18816031	99	-	.	Parent=FBgn0032701.1.mrna1;Target=FBgn0032701.1 992 2382 +
ChrX	stalkie_big_nohaplotig	exon	18816090	18817077	99	-	.	Parent=FBgn0032701.1.mrna1;Target=FBgn0032701.1 1 991 +
ChrX	stalkie_big_nohaplotig	CDS	18814641	18816031	.	-	2	Parent=FBgn0032701.1.mrna1;Target=FBgn0032701.1 992 2382 +
ChrX	stalkie_big_nohaplotig	CDS	18816090	18817077	.	-	0	Parent=FBgn0032701.1.mrna1;Target=FBgn0032701.1 1 991 +
ChrX	gffcl	locus	18817829	18818595	.	-	.	ID=RLOC_00001115;geneIDs=FBgn0032703.1.path1;transcripts=FBgn0032703.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18817829	18818595	.	-	.	ID=FBgn0032703.1.mrna1;geneID=FBgn0032703.1.path1;Name=FBgn0032703.1;Dir=sensecoverage=100.0;identity=100.0;matches=633;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001115
ChrX	stalkie_big_nohaplotig	exon	18817829	18818231	100	-	.	Parent=FBgn0032703.1.mrna1;Target=FBgn0032703.1 231 633 +
ChrX	stalkie_big_nohaplotig	exon	18818308	18818417	100	-	.	Parent=FBgn0032703.1.mrna1;Target=FBgn0032703.1 121 230 +
ChrX	stalkie_big_nohaplotig	exon	18818476	18818595	100	-	.	Parent=FBgn0032703.1.mrna1;Target=FBgn0032703.1 1 120 +
ChrX	stalkie_big_nohaplotig	CDS	18817829	18818231	.	-	1	Parent=FBgn0032703.1.mrna1;Target=FBgn0032703.1 231 633 +
ChrX	stalkie_big_nohaplotig	CDS	18818308	18818417	.	-	0	Parent=FBgn0032703.1.mrna1;Target=FBgn0032703.1 121 230 +
ChrX	stalkie_big_nohaplotig	CDS	18818476	18818595	.	-	0	Parent=FBgn0032703.1.mrna1;Target=FBgn0032703.1 1 120 +
ChrX	gffcl	locus	18842292	18853542	.	+	.	ID=RLOC_00001117;geneIDs=FBgn0031975.1.path1;transcripts=FBgn0031975.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18842292	18853542	.	+	.	ID=FBgn0031975.1.mrna1;geneID=FBgn0031975.1.path1;Name=FBgn0031975.1;Dir=sensecoverage=100.0;identity=100.0;matches=2306;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001117
ChrX	stalkie_big_nohaplotig	exon	18842292	18842415	100	+	.	Parent=FBgn0031975.1.mrna1;Target=FBgn0031975.1 1 124 +
ChrX	stalkie_big_nohaplotig	exon	18851227	18852950	99	+	.	Parent=FBgn0031975.1.mrna1;Target=FBgn0031975.1 125 1848 +
ChrX	stalkie_big_nohaplotig	exon	18853026	18853259	100	+	.	Parent=FBgn0031975.1.mrna1;Target=FBgn0031975.1 1849 2082 +
ChrX	stalkie_big_nohaplotig	exon	18853318	18853542	100	+	.	Parent=FBgn0031975.1.mrna1;Target=FBgn0031975.1 2083 2307 +
ChrX	stalkie_big_nohaplotig	CDS	18842292	18842415	.	+	0	Parent=FBgn0031975.1.mrna1;Target=FBgn0031975.1 1 124 +
ChrX	stalkie_big_nohaplotig	CDS	18851227	18852950	.	+	2	Parent=FBgn0031975.1.mrna1;Target=FBgn0031975.1 125 1848 +
ChrX	stalkie_big_nohaplotig	CDS	18853026	18853259	.	+	0	Parent=FBgn0031975.1.mrna1;Target=FBgn0031975.1 1849 2082 +
ChrX	stalkie_big_nohaplotig	CDS	18853318	18853542	.	+	0	Parent=FBgn0031975.1.mrna1;Target=FBgn0031975.1 2083 2307 +
ChrX	gffcl	locus	18853857	18856892	.	-	.	ID=RLOC_00001118;geneIDs=FBgn0031976.1.path1;transcripts=FBgn0031976.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18853857	18856892	.	-	.	ID=FBgn0031976.1.mrna1;geneID=FBgn0031976.1.path1;Name=FBgn0031976.1;Dir=sensecoverage=100.0;identity=99.8;matches=1234;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001118
ChrX	stalkie_big_nohaplotig	exon	18853857	18854074	100	-	.	Parent=FBgn0031976.1.mrna1;Target=FBgn0031976.1 1019 1236 +
ChrX	stalkie_big_nohaplotig	exon	18854166	18854366	100	-	.	Parent=FBgn0031976.1.mrna1;Target=FBgn0031976.1 818 1018 +
ChrX	stalkie_big_nohaplotig	exon	18854500	18854715	100	-	.	Parent=FBgn0031976.1.mrna1;Target=FBgn0031976.1 602 817 +
ChrX	stalkie_big_nohaplotig	exon	18854778	18854998	99	-	.	Parent=FBgn0031976.1.mrna1;Target=FBgn0031976.1 381 601 +
ChrX	stalkie_big_nohaplotig	exon	18856446	18856611	100	-	.	Parent=FBgn0031976.1.mrna1;Target=FBgn0031976.1 215 380 +
ChrX	stalkie_big_nohaplotig	exon	18856679	18856892	99	-	.	Parent=FBgn0031976.1.mrna1;Target=FBgn0031976.1 1 214 +
ChrX	stalkie_big_nohaplotig	CDS	18853857	18854074	.	-	2	Parent=FBgn0031976.1.mrna1;Target=FBgn0031976.1 1019 1236 +
ChrX	stalkie_big_nohaplotig	CDS	18854166	18854366	.	-	2	Parent=FBgn0031976.1.mrna1;Target=FBgn0031976.1 818 1018 +
ChrX	stalkie_big_nohaplotig	CDS	18854500	18854715	.	-	2	Parent=FBgn0031976.1.mrna1;Target=FBgn0031976.1 602 817 +
ChrX	stalkie_big_nohaplotig	CDS	18854778	18854998	.	-	1	Parent=FBgn0031976.1.mrna1;Target=FBgn0031976.1 381 601 +
ChrX	stalkie_big_nohaplotig	CDS	18856446	18856611	.	-	2	Parent=FBgn0031976.1.mrna1;Target=FBgn0031976.1 215 380 +
ChrX	stalkie_big_nohaplotig	CDS	18856679	18856892	.	-	0	Parent=FBgn0031976.1.mrna1;Target=FBgn0031976.1 1 214 +
ChrX	gffcl	locus	18869985	18915290	.	+	.	ID=RLOC_00001120;geneIDs=FBgn0044323.1.path1;transcripts=FBgn0044323.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18869985	18915290	.	+	.	ID=FBgn0044323.1.mrna1;geneID=FBgn0044323.1.path1;Name=FBgn0044323.1;Dir=sensecoverage=100.0;identity=100.0;matches=2177;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001120
ChrX	stalkie_big_nohaplotig	exon	18869985	18870290	100	+	.	Parent=FBgn0044323.1.mrna1;Target=FBgn0044323.1 1 306 +
ChrX	stalkie_big_nohaplotig	exon	18908225	18908654	100	+	.	Parent=FBgn0044323.1.mrna1;Target=FBgn0044323.1 307 736 +
ChrX	stalkie_big_nohaplotig	exon	18908732	18908947	100	+	.	Parent=FBgn0044323.1.mrna1;Target=FBgn0044323.1 737 952 +
ChrX	stalkie_big_nohaplotig	exon	18912843	18912899	100	+	.	Parent=FBgn0044323.1.mrna1;Target=FBgn0044323.1 953 1009 +
ChrX	stalkie_big_nohaplotig	exon	18914122	18915290	99	+	.	Parent=FBgn0044323.1.mrna1;Target=FBgn0044323.1 1010 2178 +
ChrX	stalkie_big_nohaplotig	CDS	18869985	18870290	.	+	0	Parent=FBgn0044323.1.mrna1;Target=FBgn0044323.1 1 306 +
ChrX	stalkie_big_nohaplotig	CDS	18908225	18908654	.	+	0	Parent=FBgn0044323.1.mrna1;Target=FBgn0044323.1 307 736 +
ChrX	stalkie_big_nohaplotig	CDS	18908732	18908947	.	+	2	Parent=FBgn0044323.1.mrna1;Target=FBgn0044323.1 737 952 +
ChrX	stalkie_big_nohaplotig	CDS	18912843	18912899	.	+	2	Parent=FBgn0044323.1.mrna1;Target=FBgn0044323.1 953 1009 +
ChrX	stalkie_big_nohaplotig	CDS	18914122	18915290	.	+	2	Parent=FBgn0044323.1.mrna1;Target=FBgn0044323.1 1010 2178 +
ChrX	gffcl	locus	18915833	18916595	.	-	.	ID=RLOC_00001121;geneIDs=comp135641_c0_seq1.path1;transcripts=comp135641_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18915833	18916595	.	-	.	ID=comp135641_c0_seq1.mrna1;geneID=comp135641_c0_seq1.path1;Name=comp135641_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.9;matches=762;mismatches=1;indels=0;unknowns=0;Target=comp135641_c0_seq1 763 1 .;CDS_Target=comp135641_c0_seq1 636 574 .;locus=RLOC_00001121
ChrX	stalkie_big_nohaplotig	exon	18915833	18916595	99	-	.	Parent=comp135641_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18915960	18916022	.	-	0	Parent=comp135641_c0_seq1.mrna1
ChrX	gffcl	locus	18916598	18917958	.	-	.	ID=RLOC_00001122;geneIDs=comp148617_c0_seq1.path1;transcripts=comp148617_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18916598	18917958	.	-	.	ID=comp148617_c0_seq1.mrna1;geneID=comp148617_c0_seq1.path1;Name=comp148617_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1360;mismatches=1;indels=0;unknowns=0;Target=comp148617_c0_seq1 1362 2 .;CDS_Target=comp148617_c0_seq1 170 3 .;locus=RLOC_00001122
ChrX	stalkie_big_nohaplotig	exon	18916598	18917958	99	-	.	Parent=comp148617_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18917790	18917957	.	-	0	Parent=comp148617_c0_seq1.mrna1
ChrX	gffcl	locus	18919470	18919944	.	+	.	ID=RLOC_00001123;geneIDs=comp69881_c0_seq1.path1;transcripts=comp69881_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18919470	18919944	.	+	.	ID=comp69881_c0_seq1.mrna1;geneID=comp69881_c0_seq1.path1;Name=comp69881_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=475;mismatches=0;indels=0;unknowns=0;Target=comp69881_c0_seq1 475 1 .;CDS_Target=comp69881_c0_seq1 474 388 .;locus=RLOC_00001123
ChrX	stalkie_big_nohaplotig	exon	18919470	18919944	100	+	.	Parent=comp69881_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18919857	18919943	.	+	0	Parent=comp69881_c0_seq1.mrna1
ChrX	gffcl	locus	18920717	18921961	.	-	.	ID=RLOC_00001124;geneIDs=comp145371_c0_seq1.path1,comp150454_c1_seq1.path1,comp151951_c0_seq1.path1;transcripts=comp151951_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18921414	18921961	.	-	.	ID=comp151951_c0_seq1.mrna1;geneID=comp151951_c0_seq1.path1;Name=comp151951_c0_seq1;Dir=indeterminatecoverage=51.4;identity=99.8;matches=548;mismatches=0;indels=1;unknowns=0;Target=comp151951_c0_seq1 1069 521 .;CDS_Target=comp151951_c0_seq1 873 802 .;locus=RLOC_00001124
ChrX	stalkie_big_nohaplotig	exon	18921414	18921961	99	-	.	Parent=comp151951_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18921610	18921681	.	-	0	Parent=comp151951_c0_seq1.mrna1
ChrX	gffcl	locus	18926972	18927325	.	+	.	ID=RLOC_00001125;geneIDs=comp88127_c0_seq1.path1;transcripts=comp88127_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18926972	18927325	.	+	.	ID=comp88127_c0_seq1.mrna1;geneID=comp88127_c0_seq1.path1;Name=comp88127_c0_seq1;Dir=indeterminatecoverage=97.0;identity=99.7;matches=353;mismatches=1;indels=0;unknowns=0;Target=comp88127_c0_seq1 365 12 .;CDS_Target=comp88127_c0_seq1 237 109 .;locus=RLOC_00001125
ChrX	stalkie_big_nohaplotig	exon	18926972	18927325	99	+	.	Parent=comp88127_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18927069	18927197	.	+	0	Parent=comp88127_c0_seq1.mrna1
ChrX	gffcl	locus	18930258	18931153	.	+	.	ID=RLOC_00001126;geneIDs=comp159581_c4_seq1.path2;transcripts=comp159581_c4_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	18930258	18931153	.	+	.	ID=comp159581_c4_seq1.mrna2;geneID=comp159581_c4_seq1.path2;Name=comp159581_c4_seq1;Dir=indeterminatecoverage=71.0;identity=100.0;matches=896;mismatches=0;indels=0;unknowns=0;Target=comp159581_c4_seq1 1262 367 .;CDS_Target=comp159581_c4_seq1 1260 1045 .;locus=RLOC_00001126
ChrX	stalkie_big_nohaplotig	exon	18930258	18931153	100	+	.	Parent=comp159581_c4_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	18930936	18931151	.	+	0	Parent=comp159581_c4_seq1.mrna2
ChrX	gffcl	locus	18931668	18932157	.	-	.	ID=RLOC_00001127;geneIDs=comp114504_c0_seq1.path1;transcripts=comp114504_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18931668	18932157	.	-	.	ID=comp114504_c0_seq1.mrna1;geneID=comp114504_c0_seq1.path1;Name=comp114504_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=490;mismatches=0;indels=0;unknowns=0;Target=comp114504_c0_seq1 490 1 .;CDS_Target=comp114504_c0_seq1 134 3 .;locus=RLOC_00001127
ChrX	stalkie_big_nohaplotig	exon	18931668	18932157	100	-	.	Parent=comp114504_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18932024	18932155	.	-	0	Parent=comp114504_c0_seq1.mrna1
ChrX	gffcl	locus	18934011	18937538	.	-	.	ID=RLOC_00001128;geneIDs=FBgn0032873.1.path1;transcripts=FBgn0032873.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18934011	18937538	.	-	.	ID=FBgn0032873.1.mrna1;geneID=FBgn0032873.1.path1;Name=FBgn0032873.1;Dir=sensecoverage=100.0;identity=100.0;matches=2027;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001128
ChrX	stalkie_big_nohaplotig	exon	18934011	18934417	100	-	.	Parent=FBgn0032873.1.mrna1;Target=FBgn0032873.1 1622 2028 +
ChrX	stalkie_big_nohaplotig	exon	18934483	18934622	100	-	.	Parent=FBgn0032873.1.mrna1;Target=FBgn0032873.1 1482 1621 +
ChrX	stalkie_big_nohaplotig	exon	18934895	18935081	100	-	.	Parent=FBgn0032873.1.mrna1;Target=FBgn0032873.1 1295 1481 +
ChrX	stalkie_big_nohaplotig	exon	18935144	18935324	100	-	.	Parent=FBgn0032873.1.mrna1;Target=FBgn0032873.1 1114 1294 +
ChrX	stalkie_big_nohaplotig	exon	18935781	18935961	100	-	.	Parent=FBgn0032873.1.mrna1;Target=FBgn0032873.1 933 1113 +
ChrX	stalkie_big_nohaplotig	exon	18936064	18936193	100	-	.	Parent=FBgn0032873.1.mrna1;Target=FBgn0032873.1 803 932 +
ChrX	stalkie_big_nohaplotig	exon	18936467	18936596	100	-	.	Parent=FBgn0032873.1.mrna1;Target=FBgn0032873.1 673 802 +
ChrX	stalkie_big_nohaplotig	exon	18936669	18936876	100	-	.	Parent=FBgn0032873.1.mrna1;Target=FBgn0032873.1 465 672 +
ChrX	stalkie_big_nohaplotig	exon	18936937	18937173	100	-	.	Parent=FBgn0032873.1.mrna1;Target=FBgn0032873.1 228 464 +
ChrX	stalkie_big_nohaplotig	exon	18937235	18937357	99	-	.	Parent=FBgn0032873.1.mrna1;Target=FBgn0032873.1 105 227 +
ChrX	stalkie_big_nohaplotig	exon	18937435	18937538	100	-	.	Parent=FBgn0032873.1.mrna1;Target=FBgn0032873.1 1 104 +
ChrX	stalkie_big_nohaplotig	CDS	18934011	18934417	.	-	2	Parent=FBgn0032873.1.mrna1;Target=FBgn0032873.1 1622 2028 +
ChrX	stalkie_big_nohaplotig	CDS	18934483	18934622	.	-	1	Parent=FBgn0032873.1.mrna1;Target=FBgn0032873.1 1482 1621 +
ChrX	stalkie_big_nohaplotig	CDS	18934895	18935081	.	-	2	Parent=FBgn0032873.1.mrna1;Target=FBgn0032873.1 1295 1481 +
ChrX	stalkie_big_nohaplotig	CDS	18935144	18935324	.	-	0	Parent=FBgn0032873.1.mrna1;Target=FBgn0032873.1 1114 1294 +
ChrX	stalkie_big_nohaplotig	CDS	18935781	18935961	.	-	1	Parent=FBgn0032873.1.mrna1;Target=FBgn0032873.1 933 1113 +
ChrX	stalkie_big_nohaplotig	CDS	18936064	18936193	.	-	2	Parent=FBgn0032873.1.mrna1;Target=FBgn0032873.1 803 932 +
ChrX	stalkie_big_nohaplotig	CDS	18936467	18936596	.	-	0	Parent=FBgn0032873.1.mrna1;Target=FBgn0032873.1 673 802 +
ChrX	stalkie_big_nohaplotig	CDS	18936669	18936876	.	-	1	Parent=FBgn0032873.1.mrna1;Target=FBgn0032873.1 465 672 +
ChrX	stalkie_big_nohaplotig	CDS	18936937	18937173	.	-	1	Parent=FBgn0032873.1.mrna1;Target=FBgn0032873.1 228 464 +
ChrX	stalkie_big_nohaplotig	CDS	18937235	18937357	.	-	1	Parent=FBgn0032873.1.mrna1;Target=FBgn0032873.1 105 227 +
ChrX	stalkie_big_nohaplotig	CDS	18937435	18937538	.	-	0	Parent=FBgn0032873.1.mrna1;Target=FBgn0032873.1 1 104 +
ChrX	gffcl	locus	18940582	18945521	.	+	.	ID=RLOC_00001129;geneIDs=FBgn0261787.1.path1;transcripts=FBgn0261787.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18940582	18945521	.	+	.	ID=FBgn0261787.1.mrna1;geneID=FBgn0261787.1.path1;Name=FBgn0261787.1;Dir=sensecoverage=100.0;identity=99.9;matches=3553;mismatches=1;indels=1;unknowns=0;Target=FBgn0261787.1 3 65 +;locus=RLOC_00001129
ChrX	stalkie_big_nohaplotig	exon	18940582	18941061	99	+	.	Parent=FBgn0261787.1.mrna1;Target=FBgn0261787.1 1 481 +
ChrX	stalkie_big_nohaplotig	exon	18941122	18941954	99	+	.	Parent=FBgn0261787.1.mrna1;Target=FBgn0261787.1 482 1314 +
ChrX	stalkie_big_nohaplotig	exon	18942075	18942318	100	+	.	Parent=FBgn0261787.1.mrna1;Target=FBgn0261787.1 1315 1558 +
ChrX	stalkie_big_nohaplotig	exon	18942400	18942953	100	+	.	Parent=FBgn0261787.1.mrna1;Target=FBgn0261787.1 1559 2112 +
ChrX	stalkie_big_nohaplotig	exon	18943013	18943551	100	+	.	Parent=FBgn0261787.1.mrna1;Target=FBgn0261787.1 2113 2651 +
ChrX	stalkie_big_nohaplotig	exon	18943941	18944134	100	+	.	Parent=FBgn0261787.1.mrna1;Target=FBgn0261787.1 2652 2845 +
ChrX	stalkie_big_nohaplotig	exon	18944198	18944389	100	+	.	Parent=FBgn0261787.1.mrna1;Target=FBgn0261787.1 2846 3037 +
ChrX	stalkie_big_nohaplotig	exon	18944454	18944661	100	+	.	Parent=FBgn0261787.1.mrna1;Target=FBgn0261787.1 3038 3245 +
ChrX	stalkie_big_nohaplotig	exon	18945212	18945521	100	+	.	Parent=FBgn0261787.1.mrna1;Target=FBgn0261787.1 3246 3555 +
ChrX	stalkie_big_nohaplotig	CDS	18940584	18940645	.	+	0	Parent=FBgn0261787.1.mrna1
ChrX	gffcl	locus	18953624	18954005	.	-	.	ID=RLOC_00001130;geneIDs=comp100433_c0_seq1.path1;transcripts=comp100433_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18953624	18954005	.	-	.	ID=comp100433_c0_seq1.mrna1;geneID=comp100433_c0_seq1.path1;Name=comp100433_c0_seq1;Dir=indeterminatecoverage=99.0;identity=97.6;matches=373;mismatches=9;indels=0;unknowns=0;Target=comp100433_c0_seq1 386 5 .;CDS_Target=comp100433_c0_seq1 68 6 .;locus=RLOC_00001130
ChrX	stalkie_big_nohaplotig	exon	18953624	18954005	97	-	.	Parent=comp100433_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18953942	18954004	.	-	0	Parent=comp100433_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	18957760	18959461	.	+	.	ID=comp159569_c4_seq1.mrna1;geneID=comp159569_c4_seq1.path1;Name=comp159569_c4_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1701;mismatches=1;indels=1;unknowns=0;Target=comp159569_c4_seq1 1703 1 .;CDS_Target=comp159569_c4_seq1 1267 1082 .;locus=RLOC_00001131
ChrX	stalkie_big_nohaplotig	exon	18957760	18959461	99	+	.	Parent=comp159569_c4_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	18958840	18959025	.	+	0	Parent=comp159569_c4_seq1.mrna1
ChrX	gffcl	locus	19015646	19017318	.	+	.	ID=RLOC_00001132;geneIDs=FBgn0016054.1.path1;transcripts=FBgn0016054.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19015646	19017318	.	+	.	ID=FBgn0016054.1.mrna1;geneID=FBgn0016054.1.path1;Name=FBgn0016054.1;Dir=sensecoverage=100.0;identity=100.0;matches=1614;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001132
ChrX	stalkie_big_nohaplotig	exon	19015646	19016315	100	+	.	Parent=FBgn0016054.1.mrna1;Target=FBgn0016054.1 1 670 +
ChrX	stalkie_big_nohaplotig	exon	19016375	19017318	100	+	.	Parent=FBgn0016054.1.mrna1;Target=FBgn0016054.1 671 1614 +
ChrX	stalkie_big_nohaplotig	CDS	19015646	19016315	.	+	0	Parent=FBgn0016054.1.mrna1;Target=FBgn0016054.1 1 670 +
ChrX	stalkie_big_nohaplotig	CDS	19016375	19017318	.	+	2	Parent=FBgn0016054.1.mrna1;Target=FBgn0016054.1 671 1614 +
ChrX	gffcl	locus	19019683	19020428	.	-	.	ID=RLOC_00001133;geneIDs=comp147547_c1_seq1.path1;transcripts=comp147547_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19019683	19020428	.	-	.	ID=comp147547_c1_seq1.mrna1;geneID=comp147547_c1_seq1.path1;Name=comp147547_c1_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=745;mismatches=1;indels=0;unknowns=0;Target=comp147547_c1_seq1 747 2 .;CDS_Target=comp147547_c1_seq1 406 2 .;locus=RLOC_00001133
ChrX	stalkie_big_nohaplotig	exon	19019683	19020428	99	-	.	Parent=comp147547_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19020024	19020428	.	-	0	Parent=comp147547_c1_seq1.mrna1
ChrX	gffcl	locus	19059455	19060215	.	+	.	ID=RLOC_00001134;geneIDs=comp155029_c0_seq1.path1;transcripts=comp155029_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19059455	19060215	.	+	.	ID=comp155029_c0_seq1.mrna1;geneID=comp155029_c0_seq1.path1;Name=comp155029_c0_seq1;Dir=indeterminatecoverage=96.2;identity=99.9;matches=760;mismatches=1;indels=0;unknowns=0;Target=comp155029_c0_seq1 761 1 .;CDS_Target=comp155029_c0_seq1 197 120 .;locus=RLOC_00001134
ChrX	stalkie_big_nohaplotig	exon	19059455	19060215	99	+	.	Parent=comp155029_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19059574	19059651	.	+	0	Parent=comp155029_c0_seq1.mrna1
ChrX	gffcl	locus	19061344	19084135	.	-	.	ID=RLOC_00001135;geneIDs=FBgn0053129.2.path1;transcripts=FBgn0053129.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19061344	19084135	.	-	.	ID=FBgn0053129.2.mrna1;geneID=FBgn0053129.2.path1;Name=FBgn0053129.2;Dir=sensecoverage=99.9;identity=99.8;matches=1558;mismatches=3;indels=0;unknowns=0;locus=RLOC_00001135
ChrX	stalkie_big_nohaplotig	exon	19061344	19061377	100	-	.	Parent=FBgn0053129.2.mrna1;Target=FBgn0053129.2 1528 1561 +
ChrX	stalkie_big_nohaplotig	exon	19063996	19064400	99	-	.	Parent=FBgn0053129.2.mrna1;Target=FBgn0053129.2 1123 1527 +
ChrX	stalkie_big_nohaplotig	exon	19082192	19082322	100	-	.	Parent=FBgn0053129.2.mrna1;Target=FBgn0053129.2 992 1122 +
ChrX	stalkie_big_nohaplotig	exon	19082389	19082587	98	-	.	Parent=FBgn0053129.2.mrna1;Target=FBgn0053129.2 793 991 +
ChrX	stalkie_big_nohaplotig	exon	19082673	19082787	100	-	.	Parent=FBgn0053129.2.mrna1;Target=FBgn0053129.2 678 792 +
ChrX	stalkie_big_nohaplotig	exon	19082851	19082950	100	-	.	Parent=FBgn0053129.2.mrna1;Target=FBgn0053129.2 578 677 +
ChrX	stalkie_big_nohaplotig	exon	19083407	19083572	100	-	.	Parent=FBgn0053129.2.mrna1;Target=FBgn0053129.2 412 577 +
ChrX	stalkie_big_nohaplotig	exon	19083653	19083874	100	-	.	Parent=FBgn0053129.2.mrna1;Target=FBgn0053129.2 190 411 +
ChrX	stalkie_big_nohaplotig	exon	19083947	19084135	100	-	.	Parent=FBgn0053129.2.mrna1;Target=FBgn0053129.2 1 189 +
ChrX	stalkie_big_nohaplotig	CDS	19061345	19061377	.	-	0	Parent=FBgn0053129.2.mrna1;Target=FBgn0053129.2 1528 1560 +
ChrX	stalkie_big_nohaplotig	CDS	19063996	19064400	.	-	0	Parent=FBgn0053129.2.mrna1;Target=FBgn0053129.2 1123 1527 +
ChrX	stalkie_big_nohaplotig	CDS	19082192	19082322	.	-	2	Parent=FBgn0053129.2.mrna1;Target=FBgn0053129.2 992 1122 +
ChrX	stalkie_big_nohaplotig	CDS	19082389	19082587	.	-	0	Parent=FBgn0053129.2.mrna1;Target=FBgn0053129.2 793 991 +
ChrX	stalkie_big_nohaplotig	CDS	19082673	19082787	.	-	1	Parent=FBgn0053129.2.mrna1;Target=FBgn0053129.2 678 792 +
ChrX	stalkie_big_nohaplotig	CDS	19082851	19082950	.	-	2	Parent=FBgn0053129.2.mrna1;Target=FBgn0053129.2 578 677 +
ChrX	stalkie_big_nohaplotig	CDS	19083407	19083572	.	-	0	Parent=FBgn0053129.2.mrna1;Target=FBgn0053129.2 412 577 +
ChrX	stalkie_big_nohaplotig	CDS	19083653	19083874	.	-	0	Parent=FBgn0053129.2.mrna1;Target=FBgn0053129.2 190 411 +
ChrX	stalkie_big_nohaplotig	CDS	19083947	19084135	.	-	0	Parent=FBgn0053129.2.mrna1;Target=FBgn0053129.2 1 189 +
ChrX	gffcl	locus	19090189	19259542	.	.	.	ID=RLOC_00001137;geneIDs=comp106295_c0_seq1.path1,comp152675_c0_seq1.path1,comp161980_c6_seq1.path1;transcripts=comp161980_c6_seq1.mrna1,comp106295_c0_seq1.mrna1,comp152675_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19090189	19259542	.	+	.	ID=comp161980_c6_seq1.mrna1;geneID=comp161980_c6_seq1.path1;Name=comp161980_c6_seq1;Dir=antisensecoverage=94.4;identity=91.7;matches=1768;mismatches=83;indels=77;unknowns=0;locus=RLOC_00001137
ChrX	stalkie_big_nohaplotig	exon	19090189	19090377	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 2475 2663 -
ChrX	stalkie_big_nohaplotig	exon	19090599	19091381	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 1692 2474 -
ChrX	stalkie_big_nohaplotig	exon	19093069	19093497	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 1263 1691 -
ChrX	stalkie_big_nohaplotig	exon	19095847	19095854	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 1255 1262 -
ChrX	stalkie_big_nohaplotig	exon	19101769	19101771	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 1252 1254 -
ChrX	stalkie_big_nohaplotig	exon	19113619	19113631	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 1218 1230 -
ChrX	stalkie_big_nohaplotig	exon	19118214	19118218	80	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 1213 1217 -
ChrX	stalkie_big_nohaplotig	exon	19120266	19120275	70	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 1204 1212 -
ChrX	stalkie_big_nohaplotig	exon	19133281	19133294	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 1176 1189 -
ChrX	stalkie_big_nohaplotig	exon	19134253	19134256	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 1172 1175 -
ChrX	stalkie_big_nohaplotig	exon	19139539	19139543	80	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 1167 1171 -
ChrX	stalkie_big_nohaplotig	exon	19141793	19141831	48	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 1095 1166 -
ChrX	stalkie_big_nohaplotig	exon	19145227	19145238	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 1083 1094 -
ChrX	stalkie_big_nohaplotig	exon	19147300	19147308	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 1067 1075 -
ChrX	stalkie_big_nohaplotig	exon	19149534	19149615	49	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 983 1066 -
ChrX	stalkie_big_nohaplotig	exon	19151087	19151096	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 807 816 -
ChrX	stalkie_big_nohaplotig	exon	19154359	19154363	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 802 806 -
ChrX	stalkie_big_nohaplotig	exon	19159447	19159454	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 771 778 -
ChrX	stalkie_big_nohaplotig	exon	19159468	19159477	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 726 735 -
ChrX	stalkie_big_nohaplotig	exon	19160107	19160109	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 723 725 -
ChrX	stalkie_big_nohaplotig	exon	19166649	19166652	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 719 722 -
ChrX	stalkie_big_nohaplotig	exon	19170799	19170806	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 694 701 -
ChrX	stalkie_big_nohaplotig	exon	19171899	19171911	35	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 653 680 -
ChrX	stalkie_big_nohaplotig	exon	19178488	19178556	48	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 592 652 -
ChrX	stalkie_big_nohaplotig	exon	19193461	19193470	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 546 555 -
ChrX	stalkie_big_nohaplotig	exon	19200795	19200802	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 446 453 -
ChrX	stalkie_big_nohaplotig	exon	19200814	19200823	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 401 410 -
ChrX	stalkie_big_nohaplotig	exon	19206497	19206499	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 398 400 -
ChrX	stalkie_big_nohaplotig	exon	19211888	19211891	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 394 397 -
ChrX	stalkie_big_nohaplotig	exon	19217542	19217548	85	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 388 393 -
ChrX	stalkie_big_nohaplotig	exon	19222544	19222555	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 309 320 -
ChrX	stalkie_big_nohaplotig	exon	19232435	19232440	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 303 308 -
ChrX	stalkie_big_nohaplotig	exon	19234689	19234697	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 294 302 -
ChrX	stalkie_big_nohaplotig	exon	19236280	19236315	55	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 267 293 -
ChrX	stalkie_big_nohaplotig	exon	19238393	19238399	85	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 260 266 -
ChrX	stalkie_big_nohaplotig	exon	19246555	19246565	90	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 160 170 -
ChrX	stalkie_big_nohaplotig	exon	19259534	19259542	100	+	.	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 151 159 -
ChrX	stalkie_big_nohaplotig	CDS	19090599	19091381	.	+	0	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 1692 2474 .
ChrX	stalkie_big_nohaplotig	CDS	19093069	19093131	.	+	0	Parent=comp161980_c6_seq1.mrna1;Target=comp161980_c6_seq1 1629 1691 .
ChrX	stalkie_big_nohaplotig	mRNA	19090354	19090620	.	-	.	ID=comp106295_c0_seq1.mrna1;geneID=comp106295_c0_seq1.path1;Name=comp106295_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=267;mismatches=0;indels=0;unknowns=0;Target=comp106295_c0_seq1 267 1 .;CDS_Target=comp106295_c0_seq1 249 103 .;locus=RLOC_00001137
ChrX	stalkie_big_nohaplotig	exon	19090354	19090620	100	-	.	Parent=comp106295_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19090372	19090518	.	-	0	Parent=comp106295_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19166435	19166889	.	-	.	ID=comp152675_c0_seq1.mrna1;geneID=comp152675_c0_seq1.path1;Name=comp152675_c0_seq1;Dir=indeterminatecoverage=91.7;identity=100.0;matches=455;mismatches=0;indels=0;unknowns=0;Target=comp152675_c0_seq1 455 1 .;CDS_Target=comp152675_c0_seq1 276 205 .;locus=RLOC_00001137
ChrX	stalkie_big_nohaplotig	exon	19166435	19166889	100	-	.	Parent=comp152675_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19166614	19166685	.	-	0	Parent=comp152675_c0_seq1.mrna1
ChrX	gffcl	locus	19093799	19094054	.	-	.	ID=RLOC_00001138;geneIDs=comp152351_c0_seq1.path1;transcripts=comp152351_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19093799	19094054	.	-	.	ID=comp152351_c0_seq1.mrna1;geneID=comp152351_c0_seq1.path1;Name=comp152351_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=256;mismatches=0;indels=0;unknowns=0;Target=comp152351_c0_seq1 256 1 .;CDS_Target=comp152351_c0_seq1 122 3 .;locus=RLOC_00001138
ChrX	stalkie_big_nohaplotig	exon	19093799	19094054	100	-	.	Parent=comp152351_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19093933	19094052	.	-	0	Parent=comp152351_c0_seq1.mrna1
ChrX	gffcl	locus	19095022	19095986	.	-	.	ID=RLOC_00001139;geneIDs=comp146076_c0_seq1.path1;transcripts=comp146076_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19095022	19095986	.	-	.	ID=comp146076_c0_seq1.mrna1;geneID=comp146076_c0_seq1.path1;Name=comp146076_c0_seq1;Dir=sensecoverage=98.9;identity=99.4;matches=892;mismatches=4;indels=1;unknowns=0;locus=RLOC_00001139
ChrX	stalkie_big_nohaplotig	exon	19095022	19095463	99	-	.	Parent=comp146076_c0_seq1.mrna1;Target=comp146076_c0_seq1 456 897 +
ChrX	stalkie_big_nohaplotig	exon	19095533	19095986	99	-	.	Parent=comp146076_c0_seq1.mrna1;Target=comp146076_c0_seq1 1 455 +
ChrX	stalkie_big_nohaplotig	CDS	19095278	19095463	.	-	0	Parent=comp146076_c0_seq1.mrna1;Target=comp146076_c0_seq1 456 641 +
ChrX	stalkie_big_nohaplotig	CDS	19095533	19095709	.	-	0	Parent=comp146076_c0_seq1.mrna1;Target=comp146076_c0_seq1 279 455 +
ChrX	gffcl	locus	19112596	19114576	.	+	.	ID=RLOC_00001140;geneIDs=comp144685_c1_seq1.path1;transcripts=comp144685_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19112596	19114576	.	+	.	ID=comp144685_c1_seq1.mrna1;geneID=comp144685_c1_seq1.path1;Name=comp144685_c1_seq1;Dir=sensecoverage=99.8;identity=100.0;matches=1260;mismatches=0;indels=0;unknowns=0;Target=comp144685_c1_seq1 1109 1258 +;locus=RLOC_00001140
ChrX	stalkie_big_nohaplotig	exon	19112596	19113605	100	+	.	Parent=comp144685_c1_seq1.mrna1;Target=comp144685_c1_seq1 1 1010 +
ChrX	stalkie_big_nohaplotig	exon	19114327	19114576	100	+	.	Parent=comp144685_c1_seq1.mrna1;Target=comp144685_c1_seq1 1011 1260 +
ChrX	stalkie_big_nohaplotig	CDS	19114425	19114574	.	+	0	Parent=comp144685_c1_seq1.mrna1
ChrX	gffcl	locus	19117276	19118162	.	+	.	ID=RLOC_00001141;geneIDs=comp149896_c0_seq1.path1;transcripts=comp149896_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19117276	19118162	.	+	.	ID=comp149896_c0_seq1.mrna1;geneID=comp149896_c0_seq1.path1;Name=comp149896_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=887;mismatches=0;indels=0;unknowns=0;Target=comp149896_c0_seq1 887 1 .;CDS_Target=comp149896_c0_seq1 80 3 .;locus=RLOC_00001141
ChrX	stalkie_big_nohaplotig	exon	19117276	19118162	100	+	.	Parent=comp149896_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19117278	19117355	.	+	0	Parent=comp149896_c0_seq1.mrna1
ChrX	gffcl	locus	19139818	19158817	.	+	.	ID=RLOC_00001142;geneIDs=FBgn0031632.1.path1;transcripts=FBgn0031632.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19139818	19158817	.	+	.	ID=FBgn0031632.1.mrna1;geneID=FBgn0031632.1.path1;Name=FBgn0031632.1;Dir=sensecoverage=100.0;identity=99.9;matches=1076;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001142
ChrX	stalkie_big_nohaplotig	exon	19139818	19139919	100	+	.	Parent=FBgn0031632.1.mrna1;Target=FBgn0031632.1 1 102 +
ChrX	stalkie_big_nohaplotig	exon	19154697	19154813	100	+	.	Parent=FBgn0031632.1.mrna1;Target=FBgn0031632.1 103 219 +
ChrX	stalkie_big_nohaplotig	exon	19154879	19155354	99	+	.	Parent=FBgn0031632.1.mrna1;Target=FBgn0031632.1 220 695 +
ChrX	stalkie_big_nohaplotig	exon	19158436	19158817	100	+	.	Parent=FBgn0031632.1.mrna1;Target=FBgn0031632.1 696 1077 +
ChrX	stalkie_big_nohaplotig	CDS	19139818	19139919	.	+	0	Parent=FBgn0031632.1.mrna1;Target=FBgn0031632.1 1 102 +
ChrX	stalkie_big_nohaplotig	CDS	19154697	19154813	.	+	0	Parent=FBgn0031632.1.mrna1;Target=FBgn0031632.1 103 219 +
ChrX	stalkie_big_nohaplotig	CDS	19154879	19155354	.	+	0	Parent=FBgn0031632.1.mrna1;Target=FBgn0031632.1 220 695 +
ChrX	stalkie_big_nohaplotig	CDS	19158436	19158817	.	+	1	Parent=FBgn0031632.1.mrna1;Target=FBgn0031632.1 696 1077 +
ChrX	gffcl	locus	19161143	19162709	.	+	.	ID=RLOC_00001143;geneIDs=comp154119_c0_seq1.path1;transcripts=comp154119_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19161143	19162709	.	+	.	ID=comp154119_c0_seq1.mrna1;geneID=comp154119_c0_seq1.path1;Name=comp154119_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.2;matches=1565;mismatches=2;indels=10;unknowns=0;Target=comp154119_c0_seq1 1581 5 .;CDS_Target=comp154119_c0_seq1 801 637 .;locus=RLOC_00001143
ChrX	stalkie_big_nohaplotig	exon	19161143	19162709	99	+	.	Parent=comp154119_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19161775	19161939	.	+	0	Parent=comp154119_c0_seq1.mrna1
ChrX	gffcl	locus	19162773	19163437	.	+	.	ID=RLOC_00001144;geneIDs=comp148356_c0_seq1.path1;transcripts=comp148356_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19162773	19163437	.	+	.	ID=comp148356_c0_seq1.mrna1;geneID=comp148356_c0_seq1.path1;Name=comp148356_c0_seq1;Dir=indeterminatecoverage=98.1;identity=97.9;matches=661;mismatches=3;indels=11;unknowns=0;Target=comp148356_c0_seq1 674 1 .;CDS_Target=comp148356_c0_seq1 445 383 .;locus=RLOC_00001144
ChrX	stalkie_big_nohaplotig	exon	19162773	19163437	97	+	.	Parent=comp148356_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19163155	19163207	.	+	0	Parent=comp148356_c0_seq1.mrna1
ChrX	gffcl	locus	19163986	19165387	.	-	.	ID=RLOC_00001145;geneIDs=comp155295_c1_seq1.path2;transcripts=comp155295_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	19163986	19165387	.	-	.	ID=comp155295_c1_seq1.mrna2;geneID=comp155295_c1_seq1.path2;Name=comp155295_c1_seq1;Dir=indeterminatecoverage=87.7;identity=100.0;matches=1402;mismatches=0;indels=0;unknowns=0;Target=comp155295_c1_seq1 1599 198 .;CDS_Target=comp155295_c1_seq1 327 198 .;locus=RLOC_00001145
ChrX	stalkie_big_nohaplotig	exon	19163986	19165387	100	-	.	Parent=comp155295_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	19165258	19165387	.	-	2	Parent=comp155295_c1_seq1.mrna2
ChrX	gffcl	locus	19167368	19169261	.	-	.	ID=RLOC_00001146;geneIDs=FBgn0031314.2.path1;transcripts=FBgn0031314.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19167368	19169261	.	-	.	ID=FBgn0031314.2.mrna1;geneID=FBgn0031314.2.path1;Name=FBgn0031314.2;Dir=sensecoverage=100.0;identity=99.9;matches=1838;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001146
ChrX	stalkie_big_nohaplotig	exon	19167368	19168584	99	-	.	Parent=FBgn0031314.2.mrna1;Target=FBgn0031314.2 623 1839 +
ChrX	stalkie_big_nohaplotig	exon	19168640	19169261	100	-	.	Parent=FBgn0031314.2.mrna1;Target=FBgn0031314.2 1 622 +
ChrX	stalkie_big_nohaplotig	CDS	19167368	19168584	.	-	2	Parent=FBgn0031314.2.mrna1;Target=FBgn0031314.2 623 1839 +
ChrX	stalkie_big_nohaplotig	CDS	19168640	19169261	.	-	0	Parent=FBgn0031314.2.mrna1;Target=FBgn0031314.2 1 622 +
ChrX	gffcl	locus	19176090	19183418	.	+	.	ID=RLOC_00001147;geneIDs=FBgn0032475.1.path1;transcripts=FBgn0032475.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19176090	19183418	.	+	.	ID=FBgn0032475.1.mrna1;geneID=FBgn0032475.1.path1;Name=FBgn0032475.1;Dir=sensecoverage=100.0;identity=99.9;matches=3651;mismatches=3;indels=0;unknowns=0;locus=RLOC_00001147
ChrX	stalkie_big_nohaplotig	exon	19176090	19176263	100	+	.	Parent=FBgn0032475.1.mrna1;Target=FBgn0032475.1 1 174 +
ChrX	stalkie_big_nohaplotig	exon	19176773	19177499	100	+	.	Parent=FBgn0032475.1.mrna1;Target=FBgn0032475.1 175 901 +
ChrX	stalkie_big_nohaplotig	exon	19179058	19179924	99	+	.	Parent=FBgn0032475.1.mrna1;Target=FBgn0032475.1 902 1768 +
ChrX	stalkie_big_nohaplotig	exon	19180054	19180497	100	+	.	Parent=FBgn0032475.1.mrna1;Target=FBgn0032475.1 1769 2212 +
ChrX	stalkie_big_nohaplotig	exon	19180553	19180802	99	+	.	Parent=FBgn0032475.1.mrna1;Target=FBgn0032475.1 2213 2462 +
ChrX	stalkie_big_nohaplotig	exon	19180864	19181053	99	+	.	Parent=FBgn0032475.1.mrna1;Target=FBgn0032475.1 2463 2652 +
ChrX	stalkie_big_nohaplotig	exon	19181116	19181419	100	+	.	Parent=FBgn0032475.1.mrna1;Target=FBgn0032475.1 2653 2956 +
ChrX	stalkie_big_nohaplotig	exon	19182647	19182972	100	+	.	Parent=FBgn0032475.1.mrna1;Target=FBgn0032475.1 2957 3282 +
ChrX	stalkie_big_nohaplotig	exon	19183047	19183418	100	+	.	Parent=FBgn0032475.1.mrna1;Target=FBgn0032475.1 3283 3654 +
ChrX	stalkie_big_nohaplotig	CDS	19176090	19176263	.	+	0	Parent=FBgn0032475.1.mrna1;Target=FBgn0032475.1 1 174 +
ChrX	stalkie_big_nohaplotig	CDS	19176773	19177499	.	+	0	Parent=FBgn0032475.1.mrna1;Target=FBgn0032475.1 175 901 +
ChrX	stalkie_big_nohaplotig	CDS	19179058	19179924	.	+	2	Parent=FBgn0032475.1.mrna1;Target=FBgn0032475.1 902 1768 +
ChrX	stalkie_big_nohaplotig	CDS	19180054	19180497	.	+	2	Parent=FBgn0032475.1.mrna1;Target=FBgn0032475.1 1769 2212 +
ChrX	stalkie_big_nohaplotig	CDS	19180553	19180802	.	+	2	Parent=FBgn0032475.1.mrna1;Target=FBgn0032475.1 2213 2462 +
ChrX	stalkie_big_nohaplotig	CDS	19180864	19181053	.	+	1	Parent=FBgn0032475.1.mrna1;Target=FBgn0032475.1 2463 2652 +
ChrX	stalkie_big_nohaplotig	CDS	19181116	19181419	.	+	0	Parent=FBgn0032475.1.mrna1;Target=FBgn0032475.1 2653 2956 +
ChrX	stalkie_big_nohaplotig	CDS	19182647	19182972	.	+	2	Parent=FBgn0032475.1.mrna1;Target=FBgn0032475.1 2957 3282 +
ChrX	stalkie_big_nohaplotig	CDS	19183047	19183418	.	+	0	Parent=FBgn0032475.1.mrna1;Target=FBgn0032475.1 3283 3654 +
ChrX	gffcl	locus	19183653	19184273	.	-	.	ID=RLOC_00001148;geneIDs=comp145714_c0_seq1.path1;transcripts=comp145714_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19183653	19184273	.	-	.	ID=comp145714_c0_seq1.mrna1;geneID=comp145714_c0_seq1.path1;Name=comp145714_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=615;mismatches=6;indels=6;unknowns=0;Target=comp145714_c0_seq1 627 1 .;CDS_Target=comp145714_c0_seq1 147 1 .;locus=RLOC_00001148
ChrX	stalkie_big_nohaplotig	exon	19183653	19184273	98	-	.	Parent=comp145714_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19184127	19184273	.	-	0	Parent=comp145714_c0_seq1.mrna1
ChrX	gffcl	locus	19184758	19185623	.	-	.	ID=RLOC_00001149;geneIDs=comp148149_c1_seq1.path1;transcripts=comp148149_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19184758	19185623	.	-	.	ID=comp148149_c1_seq1.mrna1;geneID=comp148149_c1_seq1.path1;Name=comp148149_c1_seq1;Dir=indeterminatecoverage=99.2;identity=98.9;matches=786;mismatches=3;indels=6;unknowns=0;locus=RLOC_00001149
ChrX	stalkie_big_nohaplotig	exon	19184758	19185532	98	-	.	Parent=comp148149_c1_seq1.mrna1;Target=comp148149_c1_seq1 795 27 .
ChrX	stalkie_big_nohaplotig	exon	19185604	19185623	100	-	.	Parent=comp148149_c1_seq1.mrna1;Target=comp148149_c1_seq1 26 7 .
ChrX	stalkie_big_nohaplotig	CDS	19185406	19185532	.	-	1	Parent=comp148149_c1_seq1.mrna1;Target=comp148149_c1_seq1 153 27 .
ChrX	stalkie_big_nohaplotig	CDS	19185604	19185623	.	-	0	Parent=comp148149_c1_seq1.mrna1;Target=comp148149_c1_seq1 26 7 .
ChrX	gffcl	locus	19186475	19186735	.	+	.	ID=RLOC_00001150;geneIDs=comp46156_c0_seq1.path1;transcripts=comp46156_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19186475	19186735	.	+	.	ID=comp46156_c0_seq1.mrna1;geneID=comp46156_c0_seq1.path1;Name=comp46156_c0_seq1;Dir=indeterminatecoverage=88.5;identity=100.0;matches=261;mismatches=0;indels=0;unknowns=0;Target=comp46156_c0_seq1 295 35 .;CDS_Target=comp46156_c0_seq1 93 37 .;locus=RLOC_00001150
ChrX	stalkie_big_nohaplotig	exon	19186475	19186735	100	+	.	Parent=comp46156_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19186477	19186533	.	+	0	Parent=comp46156_c0_seq1.mrna1
ChrX	gffcl	locus	19187013	19187548	.	-	.	ID=RLOC_00001151;geneIDs=comp149555_c0_seq1.path1;transcripts=comp149555_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19187013	19187548	.	-	.	ID=comp149555_c0_seq1.mrna1;geneID=comp149555_c0_seq1.path1;Name=comp149555_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=536;mismatches=0;indels=0;unknowns=0;Target=comp149555_c0_seq1 536 1 .;CDS_Target=comp149555_c0_seq1 394 272 .;locus=RLOC_00001151
ChrX	stalkie_big_nohaplotig	exon	19187013	19187548	100	-	.	Parent=comp149555_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19187155	19187277	.	-	0	Parent=comp149555_c0_seq1.mrna1
ChrX	gffcl	locus	19198178	19199026	.	+	.	ID=RLOC_00001152;geneIDs=FBgn0263234.1.path1;transcripts=FBgn0263234.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19198178	19199026	.	+	.	ID=FBgn0263234.1.mrna1;geneID=FBgn0263234.1.path1;Name=FBgn0263234.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=849;mismatches=0;indels=0;unknowns=0;Target=FBgn0263234.1 849 1 .;locus=RLOC_00001152
ChrX	stalkie_big_nohaplotig	exon	19198178	19199026	100	+	.	Parent=FBgn0263234.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19198178	19199026	.	+	0	Parent=FBgn0263234.1.mrna1
ChrX	gffcl	locus	19202074	19213375	.	-	.	ID=RLOC_00001153;geneIDs=FBgn0032477.1.path1;transcripts=FBgn0032477.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19202074	19213375	.	-	.	ID=FBgn0032477.1.mrna1;geneID=FBgn0032477.1.path1;Name=FBgn0032477.1;Dir=sensecoverage=100.0;identity=100.0;matches=1278;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001153
ChrX	stalkie_big_nohaplotig	exon	19202074	19202560	100	-	.	Parent=FBgn0032477.1.mrna1;Target=FBgn0032477.1 792 1278 +
ChrX	stalkie_big_nohaplotig	exon	19212297	19212531	100	-	.	Parent=FBgn0032477.1.mrna1;Target=FBgn0032477.1 557 791 +
ChrX	stalkie_big_nohaplotig	exon	19212588	19212801	100	-	.	Parent=FBgn0032477.1.mrna1;Target=FBgn0032477.1 343 556 +
ChrX	stalkie_big_nohaplotig	exon	19212978	19213122	100	-	.	Parent=FBgn0032477.1.mrna1;Target=FBgn0032477.1 198 342 +
ChrX	stalkie_big_nohaplotig	exon	19213179	19213375	100	-	.	Parent=FBgn0032477.1.mrna1;Target=FBgn0032477.1 1 197 +
ChrX	stalkie_big_nohaplotig	CDS	19202074	19202560	.	-	1	Parent=FBgn0032477.1.mrna1;Target=FBgn0032477.1 792 1278 +
ChrX	stalkie_big_nohaplotig	CDS	19212297	19212531	.	-	2	Parent=FBgn0032477.1.mrna1;Target=FBgn0032477.1 557 791 +
ChrX	stalkie_big_nohaplotig	CDS	19212588	19212801	.	-	0	Parent=FBgn0032477.1.mrna1;Target=FBgn0032477.1 343 556 +
ChrX	stalkie_big_nohaplotig	CDS	19212978	19213122	.	-	1	Parent=FBgn0032477.1.mrna1;Target=FBgn0032477.1 198 342 +
ChrX	stalkie_big_nohaplotig	CDS	19213179	19213375	.	-	0	Parent=FBgn0032477.1.mrna1;Target=FBgn0032477.1 1 197 +
ChrX	gffcl	locus	19204329	19206143	.	+	.	ID=RLOC_00001154;geneIDs=FBgn0051849.1.path1;transcripts=FBgn0051849.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19204329	19206143	.	+	.	ID=FBgn0051849.1.mrna1;geneID=FBgn0051849.1.path1;Name=FBgn0051849.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1815;mismatches=0;indels=0;unknowns=0;Target=FBgn0051849.1 1815 1 .;locus=RLOC_00001154
ChrX	stalkie_big_nohaplotig	exon	19204329	19206143	100	+	.	Parent=FBgn0051849.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19204329	19206143	.	+	0	Parent=FBgn0051849.1.mrna1
ChrX	gffcl	locus	19207690	19208617	.	+	.	ID=RLOC_00001155;geneIDs=comp152555_c0_seq1.path1;transcripts=comp152555_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19207690	19208617	.	+	.	ID=comp152555_c0_seq1.mrna1;geneID=comp152555_c0_seq1.path1;Name=comp152555_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=925;mismatches=3;indels=0;unknowns=0;Target=comp152555_c0_seq1 928 1 .;CDS_Target=comp152555_c0_seq1 299 3 .;locus=RLOC_00001155
ChrX	stalkie_big_nohaplotig	exon	19207690	19208617	99	+	.	Parent=comp152555_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19207692	19207988	.	+	0	Parent=comp152555_c0_seq1.mrna1
ChrX	gffcl	locus	19208764	19209846	.	-	.	ID=RLOC_00001156;geneIDs=comp152529_c0_seq1.path1;transcripts=comp152529_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19208764	19209846	.	-	.	ID=comp152529_c0_seq1.mrna1;geneID=comp152529_c0_seq1.path1;Name=comp152529_c0_seq1;Dir=indeterminatecoverage=98.6;identity=97.4;matches=1078;mismatches=4;indels=25;unknowns=0;Target=comp152529_c0_seq1 1122 17 .;CDS_Target=comp152529_c0_seq1 716 663 .;locus=RLOC_00001156
ChrX	stalkie_big_nohaplotig	exon	19208764	19209846	97	-	.	Parent=comp152529_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19209151	19209204	.	-	0	Parent=comp152529_c0_seq1.mrna1
ChrX	gffcl	locus	19216706	19222626	.	-	.	ID=RLOC_00001157;geneIDs=FBgn0032479.1.path1;transcripts=FBgn0032479.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19216706	19222626	.	-	.	ID=FBgn0032479.1.mrna1;geneID=FBgn0032479.1.path1;Name=FBgn0032479.1;Dir=sensecoverage=100.0;identity=100.0;matches=3971;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001157
ChrX	stalkie_big_nohaplotig	exon	19216706	19217802	100	-	.	Parent=FBgn0032479.1.mrna1;Target=FBgn0032479.1 2876 3972 +
ChrX	stalkie_big_nohaplotig	exon	19219377	19219596	100	-	.	Parent=FBgn0032479.1.mrna1;Target=FBgn0032479.1 2656 2875 +
ChrX	stalkie_big_nohaplotig	exon	19219672	19219812	100	-	.	Parent=FBgn0032479.1.mrna1;Target=FBgn0032479.1 2515 2655 +
ChrX	stalkie_big_nohaplotig	exon	19219891	19220032	100	-	.	Parent=FBgn0032479.1.mrna1;Target=FBgn0032479.1 2373 2514 +
ChrX	stalkie_big_nohaplotig	exon	19220088	19220213	100	-	.	Parent=FBgn0032479.1.mrna1;Target=FBgn0032479.1 2247 2372 +
ChrX	stalkie_big_nohaplotig	exon	19220312	19220586	100	-	.	Parent=FBgn0032479.1.mrna1;Target=FBgn0032479.1 1972 2246 +
ChrX	stalkie_big_nohaplotig	exon	19220656	19222626	99	-	.	Parent=FBgn0032479.1.mrna1;Target=FBgn0032479.1 1 1971 +
ChrX	stalkie_big_nohaplotig	CDS	19216706	19217802	.	-	2	Parent=FBgn0032479.1.mrna1;Target=FBgn0032479.1 2876 3972 +
ChrX	stalkie_big_nohaplotig	CDS	19219377	19219596	.	-	0	Parent=FBgn0032479.1.mrna1;Target=FBgn0032479.1 2656 2875 +
ChrX	stalkie_big_nohaplotig	CDS	19219672	19219812	.	-	0	Parent=FBgn0032479.1.mrna1;Target=FBgn0032479.1 2515 2655 +
ChrX	stalkie_big_nohaplotig	CDS	19219891	19220032	.	-	1	Parent=FBgn0032479.1.mrna1;Target=FBgn0032479.1 2373 2514 +
ChrX	stalkie_big_nohaplotig	CDS	19220088	19220213	.	-	1	Parent=FBgn0032479.1.mrna1;Target=FBgn0032479.1 2247 2372 +
ChrX	stalkie_big_nohaplotig	CDS	19220312	19220586	.	-	0	Parent=FBgn0032479.1.mrna1;Target=FBgn0032479.1 1972 2246 +
ChrX	stalkie_big_nohaplotig	CDS	19220656	19222626	.	-	0	Parent=FBgn0032479.1.mrna1;Target=FBgn0032479.1 1 1971 +
ChrX	gffcl	locus	19247994	19262713	.	-	.	ID=RLOC_00001158;geneIDs=FBgn0031988.1.path1,comp148520_c2_seq1.path1;transcripts=comp148520_c2_seq1.mrna1,FBgn0031988.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19247994	19262713	.	-	.	ID=comp148520_c2_seq1.mrna1;geneID=comp148520_c2_seq1.path1;Name=comp148520_c2_seq1;Dir=antisensecoverage=86.5;identity=100.0;matches=2237;mismatches=0;indels=1;unknowns=0;Target=comp148520_c2_seq1 988 1623 .;locus=RLOC_00001158
ChrX	stalkie_big_nohaplotig	exon	19247994	19249421	99	-	.	Parent=comp148520_c2_seq1.mrna1;Target=comp148520_c2_seq1 353 1781 -
ChrX	stalkie_big_nohaplotig	exon	19261766	19262048	100	-	.	Parent=comp148520_c2_seq1.mrna1;Target=comp148520_c2_seq1 1782 2064 -
ChrX	stalkie_big_nohaplotig	exon	19262050	19262113	100	-	.	Parent=comp148520_c2_seq1.mrna1;Target=comp148520_c2_seq1 2090 2153 -
ChrX	stalkie_big_nohaplotig	exon	19262252	19262713	100	-	.	Parent=comp148520_c2_seq1.mrna1;Target=comp148520_c2_seq1 2154 2615 -
ChrX	stalkie_big_nohaplotig	CDS	19248629	19249263	.	-	0	Parent=comp148520_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19248632	19262711	.	-	.	ID=FBgn0031988.1.mrna1;geneID=FBgn0031988.1.path1;Name=FBgn0031988.1;Dir=sensecoverage=100.0;identity=99.9;matches=1598;mismatches=0;indels=1;unknowns=0;locus=RLOC_00001158
ChrX	stalkie_big_nohaplotig	exon	19248632	19249421	99	-	.	Parent=FBgn0031988.1.mrna1;Target=FBgn0031988.1 809 1599 +
ChrX	stalkie_big_nohaplotig	exon	19261766	19262113	100	-	.	Parent=FBgn0031988.1.mrna1;Target=FBgn0031988.1 461 808 +
ChrX	stalkie_big_nohaplotig	exon	19262252	19262711	100	-	.	Parent=FBgn0031988.1.mrna1;Target=FBgn0031988.1 1 460 +
ChrX	stalkie_big_nohaplotig	CDS	19248632	19249421	.	-	2	Parent=FBgn0031988.1.mrna1;Target=FBgn0031988.1 809 1599 +
ChrX	stalkie_big_nohaplotig	CDS	19261766	19262113	.	-	2	Parent=FBgn0031988.1.mrna1;Target=FBgn0031988.1 461 808 +
ChrX	stalkie_big_nohaplotig	CDS	19262252	19262711	.	-	0	Parent=FBgn0031988.1.mrna1;Target=FBgn0031988.1 1 460 +
ChrX	gffcl	locus	19253194	19253514	.	-	.	ID=RLOC_00001159;geneIDs=comp149849_c0_seq1.path1;transcripts=comp149849_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19253194	19253514	.	-	.	ID=comp149849_c0_seq1.mrna1;geneID=comp149849_c0_seq1.path1;Name=comp149849_c0_seq1;Dir=indeterminatecoverage=37.3;identity=100.0;matches=321;mismatches=0;indels=0;unknowns=0;Target=comp149849_c0_seq1 321 1 .;locus=RLOC_00001159
ChrX	stalkie_big_nohaplotig	exon	19253194	19253514	100	-	.	Parent=comp149849_c0_seq1.mrna1
ChrX	gffcl	locus	19285014	19287131	.	-	.	ID=RLOC_00001160;geneIDs=comp162162_c4_seq1.path1;transcripts=comp162162_c4_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19285014	19287131	.	-	.	ID=comp162162_c4_seq1.mrna1;geneID=comp162162_c4_seq1.path1;Name=comp162162_c4_seq1;Dir=antisensecoverage=98.9;identity=98.2;matches=1983;mismatches=20;indels=16;unknowns=0;locus=RLOC_00001160
ChrX	stalkie_big_nohaplotig	exon	19285014	19286215	99	-	.	Parent=comp162162_c4_seq1.mrna1;Target=comp162162_c4_seq1 5 1206 -
ChrX	stalkie_big_nohaplotig	exon	19286256	19286494	99	-	.	Parent=comp162162_c4_seq1.mrna1;Target=comp162162_c4_seq1 1210 1448 -
ChrX	stalkie_big_nohaplotig	exon	19286558	19287131	94	-	.	Parent=comp162162_c4_seq1.mrna1;Target=comp162162_c4_seq1 1449 2014 -
ChrX	stalkie_big_nohaplotig	CDS	19286195	19286215	.	-	0	Parent=comp162162_c4_seq1.mrna1;Target=comp162162_c4_seq1 1186 1206 .
ChrX	stalkie_big_nohaplotig	CDS	19286256	19286357	.	-	0	Parent=comp162162_c4_seq1.mrna1;Target=comp162162_c4_seq1 1210 1311 .
ChrX	gffcl	locus	19346381	19347020	.	-	.	ID=RLOC_00001162;geneIDs=FBgn0010287.2.path2;transcripts=FBgn0010287.2.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	19346381	19347020	.	-	.	ID=FBgn0010287.2.mrna2;geneID=FBgn0010287.2.path2;Name=FBgn0010287.2;Dir=sensecoverage=100.0;identity=99.8;matches=572;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001162
ChrX	stalkie_big_nohaplotig	exon	19346381	19346891	99	-	.	Parent=FBgn0010287.2.mrna2;Target=FBgn0010287.2 63 573 +
ChrX	stalkie_big_nohaplotig	exon	19346959	19347020	100	-	.	Parent=FBgn0010287.2.mrna2;Target=FBgn0010287.2 1 62 +
ChrX	stalkie_big_nohaplotig	CDS	19346381	19346891	.	-	1	Parent=FBgn0010287.2.mrna2;Target=FBgn0010287.2 63 573 +
ChrX	stalkie_big_nohaplotig	CDS	19346959	19347020	.	-	0	Parent=FBgn0010287.2.mrna2;Target=FBgn0010287.2 1 62 +
ChrX	gffcl	locus	19350330	19354729	.	+	.	ID=RLOC_00001163;geneIDs=comp134734_c0_seq1.path1;transcripts=comp134734_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19350330	19354729	.	+	.	ID=comp134734_c0_seq1.mrna1;geneID=comp134734_c0_seq1.path1;Name=comp134734_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=597;mismatches=1;indels=1;unknowns=0;Target=comp134734_c0_seq1 96 182 +;locus=RLOC_00001163
ChrX	stalkie_big_nohaplotig	exon	19350330	19350904	99	+	.	Parent=comp134734_c0_seq1.mrna1;Target=comp134734_c0_seq1 1 576 +
ChrX	stalkie_big_nohaplotig	exon	19354707	19354729	100	+	.	Parent=comp134734_c0_seq1.mrna1;Target=comp134734_c0_seq1 577 599 +
ChrX	stalkie_big_nohaplotig	CDS	19350425	19350511	.	+	0	Parent=comp134734_c0_seq1.mrna1
ChrX	gffcl	locus	19351781	19352661	.	-	.	ID=RLOC_00001164;geneIDs=comp158870_c0_seq1.path1;transcripts=comp158870_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19351781	19352661	.	-	.	ID=comp158870_c0_seq1.mrna1;geneID=comp158870_c0_seq1.path1;Name=comp158870_c0_seq1;Dir=indeterminatecoverage=94.3;identity=99.3;matches=875;mismatches=6;indels=0;unknowns=0;Target=comp158870_c0_seq1 934 54 .;CDS_Target=comp158870_c0_seq1 693 460 .;locus=RLOC_00001164
ChrX	stalkie_big_nohaplotig	exon	19351781	19352661	99	-	.	Parent=comp158870_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19352022	19352255	.	-	0	Parent=comp158870_c0_seq1.mrna1
ChrX	gffcl	locus	19352794	19353346	.	-	.	ID=RLOC_00001165;geneIDs=comp135686_c0_seq1.path1;transcripts=comp135686_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19352794	19353346	.	-	.	ID=comp135686_c0_seq1.mrna1;geneID=comp135686_c0_seq1.path1;Name=comp135686_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=552;mismatches=1;indels=2;unknowns=0;Target=comp135686_c0_seq1 555 1 .;CDS_Target=comp135686_c0_seq1 274 233 .;locus=RLOC_00001165
ChrX	stalkie_big_nohaplotig	exon	19352794	19353346	99	-	.	Parent=comp135686_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19353073	19353114	.	-	0	Parent=comp135686_c0_seq1.mrna1
ChrX	gffcl	locus	19355190	19355443	.	+	.	ID=RLOC_00001166;geneIDs=comp144956_c0_seq1.path1;transcripts=comp144956_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19355190	19355443	.	+	.	ID=comp144956_c0_seq1.mrna1;geneID=comp144956_c0_seq1.path1;Name=comp144956_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=253;mismatches=1;indels=0;unknowns=0;Target=comp144956_c0_seq1 254 1 .;CDS_Target=comp144956_c0_seq1 160 92 .;locus=RLOC_00001166
ChrX	stalkie_big_nohaplotig	exon	19355190	19355443	99	+	.	Parent=comp144956_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19355281	19355349	.	+	0	Parent=comp144956_c0_seq1.mrna1
ChrX	gffcl	locus	19356660	19357342	.	-	.	ID=RLOC_00001167;geneIDs=comp118889_c0_seq1.path1;transcripts=comp118889_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19356660	19357342	.	-	.	ID=comp118889_c0_seq1.mrna1;geneID=comp118889_c0_seq1.path1;Name=comp118889_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=683;mismatches=0;indels=0;unknowns=0;Target=comp118889_c0_seq1 683 1 .;CDS_Target=comp118889_c0_seq1 189 49 .;locus=RLOC_00001167
ChrX	stalkie_big_nohaplotig	exon	19356660	19357342	100	-	.	Parent=comp118889_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19357154	19357294	.	-	0	Parent=comp118889_c0_seq1.mrna1
ChrX	gffcl	locus	19368973	19369278	.	-	.	ID=RLOC_00001168;geneIDs=comp88396_c0_seq1.path1;transcripts=comp88396_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19368973	19369278	.	-	.	ID=comp88396_c0_seq1.mrna1;geneID=comp88396_c0_seq1.path1;Name=comp88396_c0_seq1;Dir=indeterminatecoverage=97.1;identity=100.0;matches=306;mismatches=0;indels=0;unknowns=0;Target=comp88396_c0_seq1 315 10 .;CDS_Target=comp88396_c0_seq1 179 129 .;locus=RLOC_00001168
ChrX	stalkie_big_nohaplotig	exon	19368973	19369278	100	-	.	Parent=comp88396_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19369109	19369159	.	-	0	Parent=comp88396_c0_seq1.mrna1
ChrX	gffcl	locus	19376011	19420661	.	-	.	ID=RLOC_00001169;geneIDs=FBgn0261822.1.path1,comp144436_c1_seq1.path1;transcripts=FBgn0261822.1.mrna1,comp144436_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19376011	19420661	.	-	.	ID=FBgn0261822.1.mrna1;geneID=FBgn0261822.1.path1;Name=FBgn0261822.1;Dir=sensecoverage=100.0;identity=100.0;matches=879;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001169
ChrX	stalkie_big_nohaplotig	exon	19376011	19376144	100	-	.	Parent=FBgn0261822.1.mrna1;Target=FBgn0261822.1 746 879 +
ChrX	stalkie_big_nohaplotig	exon	19377355	19377552	100	-	.	Parent=FBgn0261822.1.mrna1;Target=FBgn0261822.1 548 745 +
ChrX	stalkie_big_nohaplotig	exon	19377628	19377735	100	-	.	Parent=FBgn0261822.1.mrna1;Target=FBgn0261822.1 440 547 +
ChrX	stalkie_big_nohaplotig	exon	19377802	19377962	100	-	.	Parent=FBgn0261822.1.mrna1;Target=FBgn0261822.1 279 439 +
ChrX	stalkie_big_nohaplotig	exon	19380558	19380678	100	-	.	Parent=FBgn0261822.1.mrna1;Target=FBgn0261822.1 158 278 +
ChrX	stalkie_big_nohaplotig	exon	19420505	19420661	100	-	.	Parent=FBgn0261822.1.mrna1;Target=FBgn0261822.1 1 157 +
ChrX	stalkie_big_nohaplotig	CDS	19376011	19376144	.	-	2	Parent=FBgn0261822.1.mrna1;Target=FBgn0261822.1 746 879 +
ChrX	stalkie_big_nohaplotig	CDS	19377355	19377552	.	-	2	Parent=FBgn0261822.1.mrna1;Target=FBgn0261822.1 548 745 +
ChrX	stalkie_big_nohaplotig	CDS	19377628	19377735	.	-	2	Parent=FBgn0261822.1.mrna1;Target=FBgn0261822.1 440 547 +
ChrX	stalkie_big_nohaplotig	CDS	19377802	19377962	.	-	1	Parent=FBgn0261822.1.mrna1;Target=FBgn0261822.1 279 439 +
ChrX	stalkie_big_nohaplotig	CDS	19380558	19380678	.	-	2	Parent=FBgn0261822.1.mrna1;Target=FBgn0261822.1 158 278 +
ChrX	stalkie_big_nohaplotig	CDS	19420505	19420661	.	-	0	Parent=FBgn0261822.1.mrna1;Target=FBgn0261822.1 1 157 +
ChrX	stalkie_big_nohaplotig	mRNA	19380658	19385638	.	-	.	ID=comp144436_c1_seq1.mrna1;geneID=comp144436_c1_seq1.path1;Name=comp144436_c1_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=978;mismatches=0;indels=1;unknowns=0;Target=comp144436_c1_seq1 3 749 +;locus=RLOC_00001169
ChrX	stalkie_big_nohaplotig	exon	19380658	19380678	100	-	.	Parent=comp144436_c1_seq1.mrna1;Target=comp144436_c1_seq1 959 979 +
ChrX	stalkie_big_nohaplotig	exon	19384682	19385638	99	-	.	Parent=comp144436_c1_seq1.mrna1;Target=comp144436_c1_seq1 1 958 +
ChrX	stalkie_big_nohaplotig	CDS	19384891	19385636	.	-	0	Parent=comp144436_c1_seq1.mrna1
ChrX	gffcl	locus	19376522	19377192	.	+	.	ID=RLOC_00001170;geneIDs=comp151962_c0_seq1.path1;transcripts=comp151962_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19376522	19377192	.	+	.	ID=comp151962_c0_seq1.mrna1;geneID=comp151962_c0_seq1.path1;Name=comp151962_c0_seq1;Dir=indeterminatecoverage=70.3;identity=99.9;matches=670;mismatches=1;indels=0;unknowns=0;Target=comp151962_c0_seq1 671 1 .;CDS_Target=comp151962_c0_seq1 498 352 .;locus=RLOC_00001170
ChrX	stalkie_big_nohaplotig	exon	19376522	19377192	99	+	.	Parent=comp151962_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19376873	19377019	.	+	0	Parent=comp151962_c0_seq1.mrna1
ChrX	gffcl	locus	19471058	19472129	.	-	.	ID=RLOC_00001171;geneIDs=comp149942_c0_seq1.path1;transcripts=comp149942_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19471058	19472129	.	-	.	ID=comp149942_c0_seq1.mrna1;geneID=comp149942_c0_seq1.path1;Name=comp149942_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.8;matches=1070;mismatches=1;indels=1;unknowns=0;Target=comp149942_c0_seq1 1071 1 .;CDS_Target=comp149942_c0_seq1 567 427 .;locus=RLOC_00001171
ChrX	stalkie_big_nohaplotig	exon	19471058	19472129	99	-	.	Parent=comp149942_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19471563	19471703	.	-	0	Parent=comp149942_c0_seq1.mrna1
ChrX	gffcl	locus	19474421	19475423	.	-	.	ID=RLOC_00001172;geneIDs=comp147589_c0_seq1.path7;transcripts=comp147589_c0_seq1.mrna7
ChrX	stalkie_big_nohaplotig	mRNA	19474421	19475423	.	-	.	ID=comp147589_c0_seq1.mrna7;geneID=comp147589_c0_seq1.path7;Name=comp147589_c0_seq1;Dir=indeterminatecoverage=88.6;identity=99.1;matches=994;mismatches=9;indels=0;unknowns=0;Target=comp147589_c0_seq1 1003 1 .;CDS_Target=comp147589_c0_seq1 874 2 .;locus=RLOC_00001172
ChrX	stalkie_big_nohaplotig	exon	19474421	19475423	99	-	.	Parent=comp147589_c0_seq1.mrna7
ChrX	stalkie_big_nohaplotig	CDS	19474550	19475422	.	-	0	Parent=comp147589_c0_seq1.mrna7
ChrX	gffcl	locus	19496943	19504081	.	+	.	ID=RLOC_00001173;geneIDs=FBgn0020240.1.path1;transcripts=FBgn0020240.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19496943	19504081	.	+	.	ID=FBgn0020240.1.mrna1;geneID=FBgn0020240.1.path1;Name=FBgn0020240.1;Dir=sensecoverage=100.0;identity=100.0;matches=5243;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001173
ChrX	stalkie_big_nohaplotig	exon	19496943	19497761	99	+	.	Parent=FBgn0020240.1.mrna1;Target=FBgn0020240.1 3 821 +
ChrX	stalkie_big_nohaplotig	exon	19498664	19499298	100	+	.	Parent=FBgn0020240.1.mrna1;Target=FBgn0020240.1 822 1456 +
ChrX	stalkie_big_nohaplotig	exon	19499400	19500631	99	+	.	Parent=FBgn0020240.1.mrna1;Target=FBgn0020240.1 1457 2688 +
ChrX	stalkie_big_nohaplotig	exon	19500705	19501760	100	+	.	Parent=FBgn0020240.1.mrna1;Target=FBgn0020240.1 2689 3744 +
ChrX	stalkie_big_nohaplotig	exon	19501856	19502512	100	+	.	Parent=FBgn0020240.1.mrna1;Target=FBgn0020240.1 3745 4401 +
ChrX	stalkie_big_nohaplotig	exon	19502587	19502748	100	+	.	Parent=FBgn0020240.1.mrna1;Target=FBgn0020240.1 4402 4563 +
ChrX	stalkie_big_nohaplotig	exon	19502819	19503012	100	+	.	Parent=FBgn0020240.1.mrna1;Target=FBgn0020240.1 4564 4757 +
ChrX	stalkie_big_nohaplotig	exon	19503075	19503249	100	+	.	Parent=FBgn0020240.1.mrna1;Target=FBgn0020240.1 4758 4932 +
ChrX	stalkie_big_nohaplotig	exon	19503688	19503793	100	+	.	Parent=FBgn0020240.1.mrna1;Target=FBgn0020240.1 4933 5038 +
ChrX	stalkie_big_nohaplotig	exon	19503873	19504081	100	+	.	Parent=FBgn0020240.1.mrna1;Target=FBgn0020240.1 5039 5247 +
ChrX	stalkie_big_nohaplotig	CDS	19496944	19497761	.	+	0	Parent=FBgn0020240.1.mrna1;Target=FBgn0020240.1 4 821 +
ChrX	stalkie_big_nohaplotig	CDS	19498664	19499298	.	+	1	Parent=FBgn0020240.1.mrna1;Target=FBgn0020240.1 822 1456 +
ChrX	stalkie_big_nohaplotig	CDS	19499400	19500631	.	+	2	Parent=FBgn0020240.1.mrna1;Target=FBgn0020240.1 1457 2688 +
ChrX	stalkie_big_nohaplotig	CDS	19500705	19501760	.	+	0	Parent=FBgn0020240.1.mrna1;Target=FBgn0020240.1 2689 3744 +
ChrX	stalkie_big_nohaplotig	CDS	19501856	19502512	.	+	0	Parent=FBgn0020240.1.mrna1;Target=FBgn0020240.1 3745 4401 +
ChrX	stalkie_big_nohaplotig	CDS	19502587	19502748	.	+	0	Parent=FBgn0020240.1.mrna1;Target=FBgn0020240.1 4402 4563 +
ChrX	stalkie_big_nohaplotig	CDS	19502819	19503012	.	+	0	Parent=FBgn0020240.1.mrna1;Target=FBgn0020240.1 4564 4757 +
ChrX	stalkie_big_nohaplotig	CDS	19503075	19503249	.	+	1	Parent=FBgn0020240.1.mrna1;Target=FBgn0020240.1 4758 4932 +
ChrX	stalkie_big_nohaplotig	CDS	19503688	19503793	.	+	0	Parent=FBgn0020240.1.mrna1;Target=FBgn0020240.1 4933 5038 +
ChrX	stalkie_big_nohaplotig	CDS	19503873	19504081	.	+	2	Parent=FBgn0020240.1.mrna1;Target=FBgn0020240.1 5039 5247 +
ChrX	gffcl	locus	19510088	19510727	.	-	.	ID=RLOC_00001174;geneIDs=FBgn0010287.2.path1;transcripts=FBgn0010287.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19510088	19510727	.	-	.	ID=FBgn0010287.2.mrna1;geneID=FBgn0010287.2.path1;Name=FBgn0010287.2;Dir=sensecoverage=100.0;identity=100.0;matches=573;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001174
ChrX	stalkie_big_nohaplotig	exon	19510088	19510598	100	-	.	Parent=FBgn0010287.2.mrna1;Target=FBgn0010287.2 63 573 +
ChrX	stalkie_big_nohaplotig	exon	19510666	19510727	100	-	.	Parent=FBgn0010287.2.mrna1;Target=FBgn0010287.2 1 62 +
ChrX	stalkie_big_nohaplotig	CDS	19510088	19510598	.	-	1	Parent=FBgn0010287.2.mrna1;Target=FBgn0010287.2 63 573 +
ChrX	stalkie_big_nohaplotig	CDS	19510666	19510727	.	-	0	Parent=FBgn0010287.2.mrna1;Target=FBgn0010287.2 1 62 +
ChrX	gffcl	locus	19513192	19514346	.	-	.	ID=RLOC_00001175;geneIDs=comp160519_c0_seq1.path1;transcripts=comp160519_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19513192	19514346	.	-	.	ID=comp160519_c0_seq1.mrna1;geneID=comp160519_c0_seq1.path1;Name=comp160519_c0_seq1;Dir=indeterminatecoverage=55.2;identity=96.9;matches=1139;mismatches=4;indels=33;unknowns=0;Target=comp160519_c0_seq1 2056 893 .;CDS_Target=comp160519_c0_seq1 2056 1934 .;locus=RLOC_00001175
ChrX	stalkie_big_nohaplotig	exon	19513192	19514346	96	-	.	Parent=comp160519_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19513192	19513314	.	-	0	Parent=comp160519_c0_seq1.mrna1
ChrX	gffcl	locus	19515288	19517617	.	-	.	ID=RLOC_00001176;geneIDs=FBgn0010287.4.path1,comp135679_c0_seq1.path1;transcripts=comp135679_c0_seq1.mrna1,FBgn0010287.4.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19515288	19516299	.	-	.	ID=comp135679_c0_seq1.mrna1;geneID=comp135679_c0_seq1.path1;Name=comp135679_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=439;mismatches=2;indels=0;unknowns=0;Target=comp135679_c0_seq1 211 363 +;locus=RLOC_00001176
ChrX	stalkie_big_nohaplotig	exon	19515288	19515705	99	-	.	Parent=comp135679_c0_seq1.mrna1;Target=comp135679_c0_seq1 24 441 +
ChrX	stalkie_big_nohaplotig	exon	19516277	19516299	100	-	.	Parent=comp135679_c0_seq1.mrna1;Target=comp135679_c0_seq1 1 23 +
ChrX	stalkie_big_nohaplotig	CDS	19515366	19515518	.	-	0	Parent=comp135679_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19515966	19517617	.	-	.	ID=FBgn0010287.4.mrna1;geneID=FBgn0010287.4.path1;Name=FBgn0010287.4;Dir=sensecoverage=100.0;identity=100.0;matches=711;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001176
ChrX	stalkie_big_nohaplotig	exon	19515966	19516482	100	-	.	Parent=FBgn0010287.4.mrna1;Target=FBgn0010287.4 195 711 +
ChrX	stalkie_big_nohaplotig	exon	19517354	19517439	100	-	.	Parent=FBgn0010287.4.mrna1;Target=FBgn0010287.4 109 194 +
ChrX	stalkie_big_nohaplotig	exon	19517510	19517617	100	-	.	Parent=FBgn0010287.4.mrna1;Target=FBgn0010287.4 1 108 +
ChrX	stalkie_big_nohaplotig	CDS	19515966	19516482	.	-	1	Parent=FBgn0010287.4.mrna1;Target=FBgn0010287.4 195 711 +
ChrX	stalkie_big_nohaplotig	CDS	19517354	19517439	.	-	0	Parent=FBgn0010287.4.mrna1;Target=FBgn0010287.4 109 194 +
ChrX	stalkie_big_nohaplotig	CDS	19517510	19517617	.	-	0	Parent=FBgn0010287.4.mrna1;Target=FBgn0010287.4 1 108 +
ChrX	gffcl	locus	19543025	19546832	.	+	.	ID=RLOC_00001178;geneIDs=FBgn0032409.1.path1;transcripts=FBgn0032409.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19543025	19546832	.	+	.	ID=FBgn0032409.1.mrna1;geneID=FBgn0032409.1.path1;Name=FBgn0032409.1;Dir=sensecoverage=100.0;identity=100.0;matches=2193;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001178
ChrX	stalkie_big_nohaplotig	exon	19543025	19543157	100	+	.	Parent=FBgn0032409.1.mrna1;Target=FBgn0032409.1 1 133 +
ChrX	stalkie_big_nohaplotig	exon	19544115	19545125	100	+	.	Parent=FBgn0032409.1.mrna1;Target=FBgn0032409.1 134 1144 +
ChrX	stalkie_big_nohaplotig	exon	19545225	19545776	100	+	.	Parent=FBgn0032409.1.mrna1;Target=FBgn0032409.1 1145 1696 +
ChrX	stalkie_big_nohaplotig	exon	19546336	19546832	100	+	.	Parent=FBgn0032409.1.mrna1;Target=FBgn0032409.1 1697 2193 +
ChrX	stalkie_big_nohaplotig	CDS	19543025	19543157	.	+	0	Parent=FBgn0032409.1.mrna1;Target=FBgn0032409.1 1 133 +
ChrX	stalkie_big_nohaplotig	CDS	19544115	19545125	.	+	2	Parent=FBgn0032409.1.mrna1;Target=FBgn0032409.1 134 1144 +
ChrX	stalkie_big_nohaplotig	CDS	19545225	19545776	.	+	2	Parent=FBgn0032409.1.mrna1;Target=FBgn0032409.1 1145 1696 +
ChrX	stalkie_big_nohaplotig	CDS	19546336	19546832	.	+	2	Parent=FBgn0032409.1.mrna1;Target=FBgn0032409.1 1697 2193 +
ChrX	gffcl	locus	19543440	19543972	.	+	.	ID=RLOC_00001179;geneIDs=comp74058_c0_seq1.path1;transcripts=comp74058_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19543440	19543972	.	+	.	ID=comp74058_c0_seq1.mrna1;geneID=comp74058_c0_seq1.path1;Name=comp74058_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=533;mismatches=0;indels=0;unknowns=0;Target=comp74058_c0_seq1 533 1 .;CDS_Target=comp74058_c0_seq1 173 48 .;locus=RLOC_00001179
ChrX	stalkie_big_nohaplotig	exon	19543440	19543972	100	+	.	Parent=comp74058_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19543487	19543612	.	+	0	Parent=comp74058_c0_seq1.mrna1
ChrX	gffcl	locus	19547681	19548530	.	-	.	ID=RLOC_00001180;geneIDs=comp161670_c6_seq1.path2;transcripts=comp161670_c6_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	19547681	19548530	.	-	.	ID=comp161670_c6_seq1.mrna2;geneID=comp161670_c6_seq1.path2;Name=comp161670_c6_seq1;Dir=indeterminatecoverage=22.0;identity=99.8;matches=848;mismatches=2;indels=0;unknowns=0;Target=comp161670_c6_seq1 3859 3010 .;CDS_Target=comp161670_c6_seq1 3261 3010 .;locus=RLOC_00001180
ChrX	stalkie_big_nohaplotig	exon	19547681	19548530	99	-	.	Parent=comp161670_c6_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	19548279	19548530	.	-	0	Parent=comp161670_c6_seq1.mrna2
ChrX	gffcl	locus	19551149	19551713	.	-	.	ID=RLOC_00001181;geneIDs=comp116119_c0_seq1.path1;transcripts=comp116119_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19551149	19551713	.	-	.	ID=comp116119_c0_seq1.mrna1;geneID=comp116119_c0_seq1.path1;Name=comp116119_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=561;mismatches=4;indels=0;unknowns=0;Target=comp116119_c0_seq1 565 1 .;CDS_Target=comp116119_c0_seq1 391 338 .;locus=RLOC_00001181
ChrX	stalkie_big_nohaplotig	exon	19551149	19551713	99	-	.	Parent=comp116119_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19551323	19551376	.	-	0	Parent=comp116119_c0_seq1.mrna1
ChrX	gffcl	locus	19551786	19552011	.	-	.	ID=RLOC_00001182;geneIDs=comp755918_c0_seq1.path1;transcripts=comp755918_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19551786	19552011	.	-	.	ID=comp755918_c0_seq1.mrna1;geneID=comp755918_c0_seq1.path1;Name=comp755918_c0_seq1;Dir=indeterminatecoverage=97.0;identity=100.0;matches=226;mismatches=0;indels=0;unknowns=0;Target=comp755918_c0_seq1 233 8 .;CDS_Target=comp755918_c0_seq1 61 8 .;locus=RLOC_00001182
ChrX	stalkie_big_nohaplotig	exon	19551786	19552011	100	-	.	Parent=comp755918_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19551958	19552011	.	-	0	Parent=comp755918_c0_seq1.mrna1
ChrX	gffcl	locus	19552600	19554704	.	-	.	ID=RLOC_00001183;geneIDs=FBgn0029137.1.path1;transcripts=FBgn0029137.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19552600	19554704	.	-	.	ID=FBgn0029137.1.mrna1;geneID=FBgn0029137.1.path1;Name=FBgn0029137.1;Dir=sensecoverage=100.0;identity=100.0;matches=1824;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001183
ChrX	stalkie_big_nohaplotig	exon	19552600	19552788	100	-	.	Parent=FBgn0029137.1.mrna1;Target=FBgn0029137.1 1636 1824 +
ChrX	stalkie_big_nohaplotig	exon	19552857	19553348	100	-	.	Parent=FBgn0029137.1.mrna1;Target=FBgn0029137.1 1144 1635 +
ChrX	stalkie_big_nohaplotig	exon	19553405	19553814	100	-	.	Parent=FBgn0029137.1.mrna1;Target=FBgn0029137.1 734 1143 +
ChrX	stalkie_big_nohaplotig	exon	19553972	19554704	100	-	.	Parent=FBgn0029137.1.mrna1;Target=FBgn0029137.1 1 733 +
ChrX	stalkie_big_nohaplotig	CDS	19552600	19552788	.	-	0	Parent=FBgn0029137.1.mrna1;Target=FBgn0029137.1 1636 1824 +
ChrX	stalkie_big_nohaplotig	CDS	19552857	19553348	.	-	0	Parent=FBgn0029137.1.mrna1;Target=FBgn0029137.1 1144 1635 +
ChrX	stalkie_big_nohaplotig	CDS	19553405	19553814	.	-	2	Parent=FBgn0029137.1.mrna1;Target=FBgn0029137.1 734 1143 +
ChrX	stalkie_big_nohaplotig	CDS	19553972	19554704	.	-	0	Parent=FBgn0029137.1.mrna1;Target=FBgn0029137.1 1 733 +
ChrX	gffcl	locus	19563658	19576077	.	-	.	ID=RLOC_00001184;geneIDs=comp156934_c0_seq1.path2;transcripts=comp156934_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	19563658	19576077	.	-	.	ID=comp156934_c0_seq1.mrna2;geneID=comp156934_c0_seq1.path2;Name=comp156934_c0_seq1;Dir=indeterminatecoverage=32.5;identity=99.6;matches=267;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001184
ChrX	stalkie_big_nohaplotig	exon	19563658	19563914	100	-	.	Parent=comp156934_c0_seq1.mrna2;Target=comp156934_c0_seq1 825 569 .
ChrX	stalkie_big_nohaplotig	exon	19576067	19576077	90	-	.	Parent=comp156934_c0_seq1.mrna2;Target=comp156934_c0_seq1 568 558 .
ChrX	stalkie_big_nohaplotig	CDS	19563863	19563914	.	-	1	Parent=comp156934_c0_seq1.mrna2;Target=comp156934_c0_seq1 620 569 .
ChrX	stalkie_big_nohaplotig	CDS	19576067	19576077	.	-	0	Parent=comp156934_c0_seq1.mrna2;Target=comp156934_c0_seq1 568 558 .
ChrX	gffcl	locus	19564933	19565180	.	+	.	ID=RLOC_00001185;geneIDs=comp164055_c0_seq1.path1;transcripts=comp164055_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19564933	19565180	.	+	.	ID=comp164055_c0_seq1.mrna1;geneID=comp164055_c0_seq1.path1;Name=comp164055_c0_seq1;Dir=indeterminatecoverage=97.3;identity=100.0;matches=248;mismatches=0;indels=0;unknowns=0;Target=comp164055_c0_seq1 255 8 .;CDS_Target=comp164055_c0_seq1 206 9 .;locus=RLOC_00001185
ChrX	stalkie_big_nohaplotig	exon	19564933	19565180	100	+	.	Parent=comp164055_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19564934	19565131	.	+	0	Parent=comp164055_c0_seq1.mrna1
ChrX	gffcl	locus	19565863	19567769	.	-	.	ID=RLOC_00001186;geneIDs=comp157520_c0_seq1.path1;transcripts=comp157520_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19565863	19567769	.	-	.	ID=comp157520_c0_seq1.mrna1;geneID=comp157520_c0_seq1.path1;Name=comp157520_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=1600;mismatches=9;indels=0;unknowns=0;Target=comp157520_c0_seq1 808 1341 .;locus=RLOC_00001186
ChrX	stalkie_big_nohaplotig	exon	19565863	19567225	99	-	.	Parent=comp157520_c0_seq1.mrna1;Target=comp157520_c0_seq1 1 1363 -
ChrX	stalkie_big_nohaplotig	exon	19567524	19567769	99	-	.	Parent=comp157520_c0_seq1.mrna1;Target=comp157520_c0_seq1 1364 1609 -
ChrX	stalkie_big_nohaplotig	CDS	19566670	19567203	.	-	0	Parent=comp157520_c0_seq1.mrna1
ChrX	gffcl	locus	19574743	19575752	.	-	.	ID=RLOC_00001187;geneIDs=comp161774_c0_seq1.path1;transcripts=comp161774_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19574743	19575752	.	-	.	ID=comp161774_c0_seq1.mrna1;geneID=comp161774_c0_seq1.path1;Name=comp161774_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1001;mismatches=6;indels=5;unknowns=0;Target=comp161774_c0_seq1 1009 1 .;CDS_Target=comp161774_c0_seq1 150 40 .;locus=RLOC_00001187
ChrX	stalkie_big_nohaplotig	exon	19574743	19575752	98	-	.	Parent=comp161774_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19575602	19575713	.	-	0	Parent=comp161774_c0_seq1.mrna1
ChrX	gffcl	locus	19577577	19582266	.	+	.	ID=RLOC_00001188;geneIDs=FBgn0027081.1.path1,comp134725_c1_seq1.path1;transcripts=comp134725_c1_seq1.mrna1,FBgn0027081.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19577577	19579088	.	+	.	ID=comp134725_c1_seq1.mrna1;geneID=comp134725_c1_seq1.path1;Name=comp134725_c1_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=1069;mismatches=0;indels=0;unknowns=0;Target=comp134725_c1_seq1 769 969 +;locus=RLOC_00001188
ChrX	stalkie_big_nohaplotig	exon	19577577	19578623	100	+	.	Parent=comp134725_c1_seq1.mrna1;Target=comp134725_c1_seq1 1 1047 +
ChrX	stalkie_big_nohaplotig	exon	19579067	19579088	100	+	.	Parent=comp134725_c1_seq1.mrna1;Target=comp134725_c1_seq1 1048 1069 +
ChrX	stalkie_big_nohaplotig	CDS	19578345	19578545	.	+	0	Parent=comp134725_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19579066	19582266	.	+	.	ID=FBgn0027081.1.mrna1;geneID=FBgn0027081.1.path1;Name=FBgn0027081.1;Dir=sensecoverage=89.8;identity=100.0;matches=2089;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001188
ChrX	stalkie_big_nohaplotig	exon	19579066	19579130	100	+	.	Parent=FBgn0027081.1.mrna1;Target=FBgn0027081.1 237 301 +
ChrX	stalkie_big_nohaplotig	exon	19580118	19580557	100	+	.	Parent=FBgn0027081.1.mrna1;Target=FBgn0027081.1 302 741 +
ChrX	stalkie_big_nohaplotig	exon	19580621	19581291	100	+	.	Parent=FBgn0027081.1.mrna1;Target=FBgn0027081.1 742 1412 +
ChrX	stalkie_big_nohaplotig	exon	19581354	19582266	100	+	.	Parent=FBgn0027081.1.mrna1;Target=FBgn0027081.1 1413 2325 +
ChrX	stalkie_big_nohaplotig	CDS	19579067	19579130	.	+	0	Parent=FBgn0027081.1.mrna1;Target=FBgn0027081.1 238 301 +
ChrX	stalkie_big_nohaplotig	CDS	19580118	19580557	.	+	2	Parent=FBgn0027081.1.mrna1;Target=FBgn0027081.1 302 741 +
ChrX	stalkie_big_nohaplotig	CDS	19580621	19581291	.	+	0	Parent=FBgn0027081.1.mrna1;Target=FBgn0027081.1 742 1412 +
ChrX	stalkie_big_nohaplotig	CDS	19581354	19582266	.	+	1	Parent=FBgn0027081.1.mrna1;Target=FBgn0027081.1 1413 2325 +
ChrX	gffcl	locus	19582533	19582971	.	-	.	ID=RLOC_00001189;geneIDs=comp703931_c0_seq1.path1;transcripts=comp703931_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19582533	19582971	.	-	.	ID=comp703931_c0_seq1.mrna1;geneID=comp703931_c0_seq1.path1;Name=comp703931_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=439;mismatches=0;indels=0;unknowns=0;Target=comp703931_c0_seq1 439 1 .;CDS_Target=comp703931_c0_seq1 131 3 .;locus=RLOC_00001189
ChrX	stalkie_big_nohaplotig	exon	19582533	19582971	100	-	.	Parent=comp703931_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19582841	19582969	.	-	0	Parent=comp703931_c0_seq1.mrna1
ChrX	gffcl	locus	19583099	19585163	.	-	.	ID=RLOC_00001190;geneIDs=comp154508_c0_seq1.path1;transcripts=comp154508_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19583099	19585163	.	-	.	ID=comp154508_c0_seq1.mrna1;geneID=comp154508_c0_seq1.path1;Name=comp154508_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.9;matches=2062;mismatches=3;indels=0;unknowns=0;Target=comp154508_c0_seq1 2072 8 .;CDS_Target=comp154508_c0_seq1 855 535 .;locus=RLOC_00001190
ChrX	stalkie_big_nohaplotig	exon	19583099	19585163	99	-	.	Parent=comp154508_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19584316	19584636	.	-	0	Parent=comp154508_c0_seq1.mrna1
ChrX	gffcl	locus	19587885	19588550	.	-	.	ID=RLOC_00001191;geneIDs=FBgn0015797.1.path1;transcripts=FBgn0015797.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19587885	19588550	.	-	.	ID=FBgn0015797.1.mrna1;geneID=FBgn0015797.1.path1;Name=FBgn0015797.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=666;mismatches=0;indels=0;unknowns=0;Target=FBgn0015797.1 666 1 .;locus=RLOC_00001191
ChrX	stalkie_big_nohaplotig	exon	19587885	19588550	100	-	.	Parent=FBgn0015797.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19587885	19588550	.	-	0	Parent=FBgn0015797.1.mrna1
ChrX	gffcl	locus	19593147	19595931	.	+	.	ID=RLOC_00001192;geneIDs=FBgn0031611.1.path1;transcripts=FBgn0031611.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19593147	19595931	.	+	.	ID=FBgn0031611.1.mrna1;geneID=FBgn0031611.1.path1;Name=FBgn0031611.1;Dir=sensecoverage=100.0;identity=100.0;matches=2598;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001192
ChrX	stalkie_big_nohaplotig	exon	19593147	19593248	100	+	.	Parent=FBgn0031611.1.mrna1;Target=FBgn0031611.1 1 102 +
ChrX	stalkie_big_nohaplotig	exon	19593311	19594180	100	+	.	Parent=FBgn0031611.1.mrna1;Target=FBgn0031611.1 103 972 +
ChrX	stalkie_big_nohaplotig	exon	19594242	19594995	100	+	.	Parent=FBgn0031611.1.mrna1;Target=FBgn0031611.1 973 1726 +
ChrX	stalkie_big_nohaplotig	exon	19595060	19595931	100	+	.	Parent=FBgn0031611.1.mrna1;Target=FBgn0031611.1 1727 2598 +
ChrX	stalkie_big_nohaplotig	CDS	19593147	19593248	.	+	0	Parent=FBgn0031611.1.mrna1;Target=FBgn0031611.1 1 102 +
ChrX	stalkie_big_nohaplotig	CDS	19593311	19594180	.	+	0	Parent=FBgn0031611.1.mrna1;Target=FBgn0031611.1 103 972 +
ChrX	stalkie_big_nohaplotig	CDS	19594242	19594995	.	+	0	Parent=FBgn0031611.1.mrna1;Target=FBgn0031611.1 973 1726 +
ChrX	stalkie_big_nohaplotig	CDS	19595060	19595931	.	+	2	Parent=FBgn0031611.1.mrna1;Target=FBgn0031611.1 1727 2598 +
ChrX	gffcl	locus	19596208	19597152	.	-	.	ID=RLOC_00001193;geneIDs=FBgn0032698.1.path1;transcripts=FBgn0032698.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19596208	19597152	.	-	.	ID=FBgn0032698.1.mrna1;geneID=FBgn0032698.1.path1;Name=FBgn0032698.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=945;mismatches=0;indels=0;unknowns=0;Target=FBgn0032698.1 945 1 .;locus=RLOC_00001193
ChrX	stalkie_big_nohaplotig	exon	19596208	19597152	100	-	.	Parent=FBgn0032698.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19596208	19597152	.	-	0	Parent=FBgn0032698.1.mrna1
ChrX	gffcl	locus	19604968	19608505	.	-	.	ID=RLOC_00001195;geneIDs=FBgn0004915.4.path1;transcripts=FBgn0004915.4.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19604968	19608505	.	-	.	ID=FBgn0004915.4.mrna1;geneID=FBgn0004915.4.path1;Name=FBgn0004915.4;Dir=sensecoverage=100.0;identity=100.0;matches=1038;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001195
ChrX	stalkie_big_nohaplotig	exon	19604968	19605126	100	-	.	Parent=FBgn0004915.4.mrna1;Target=FBgn0004915.4 880 1038 +
ChrX	stalkie_big_nohaplotig	exon	19605196	19605317	100	-	.	Parent=FBgn0004915.4.mrna1;Target=FBgn0004915.4 758 879 +
ChrX	stalkie_big_nohaplotig	exon	19605390	19605624	100	-	.	Parent=FBgn0004915.4.mrna1;Target=FBgn0004915.4 523 757 +
ChrX	stalkie_big_nohaplotig	exon	19607885	19608293	100	-	.	Parent=FBgn0004915.4.mrna1;Target=FBgn0004915.4 114 522 +
ChrX	stalkie_big_nohaplotig	exon	19608393	19608505	100	-	.	Parent=FBgn0004915.4.mrna1;Target=FBgn0004915.4 1 113 +
ChrX	stalkie_big_nohaplotig	CDS	19604968	19605126	.	-	0	Parent=FBgn0004915.4.mrna1;Target=FBgn0004915.4 880 1038 +
ChrX	stalkie_big_nohaplotig	CDS	19605196	19605317	.	-	2	Parent=FBgn0004915.4.mrna1;Target=FBgn0004915.4 758 879 +
ChrX	stalkie_big_nohaplotig	CDS	19605390	19605624	.	-	0	Parent=FBgn0004915.4.mrna1;Target=FBgn0004915.4 523 757 +
ChrX	stalkie_big_nohaplotig	CDS	19607885	19608293	.	-	1	Parent=FBgn0004915.4.mrna1;Target=FBgn0004915.4 114 522 +
ChrX	stalkie_big_nohaplotig	CDS	19608393	19608505	.	-	0	Parent=FBgn0004915.4.mrna1;Target=FBgn0004915.4 1 113 +
ChrX	gffcl	locus	19611013	19611710	.	+	.	ID=RLOC_00001196;geneIDs=FBgn0032240.2.path1;transcripts=FBgn0032240.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19611013	19611710	.	+	.	ID=FBgn0032240.2.mrna1;geneID=FBgn0032240.2.path1;Name=FBgn0032240.2;Dir=sensecoverage=100.0;identity=100.0;matches=486;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001196
ChrX	stalkie_big_nohaplotig	exon	19611013	19611030	100	+	.	Parent=FBgn0032240.2.mrna1;Target=FBgn0032240.2 1 18 +
ChrX	stalkie_big_nohaplotig	exon	19611090	19611131	100	+	.	Parent=FBgn0032240.2.mrna1;Target=FBgn0032240.2 19 60 +
ChrX	stalkie_big_nohaplotig	exon	19611227	19611325	100	+	.	Parent=FBgn0032240.2.mrna1;Target=FBgn0032240.2 61 159 +
ChrX	stalkie_big_nohaplotig	exon	19611384	19611710	100	+	.	Parent=FBgn0032240.2.mrna1;Target=FBgn0032240.2 160 486 +
ChrX	stalkie_big_nohaplotig	CDS	19611013	19611030	.	+	0	Parent=FBgn0032240.2.mrna1;Target=FBgn0032240.2 1 18 +
ChrX	stalkie_big_nohaplotig	CDS	19611090	19611131	.	+	0	Parent=FBgn0032240.2.mrna1;Target=FBgn0032240.2 19 60 +
ChrX	stalkie_big_nohaplotig	CDS	19611227	19611325	.	+	0	Parent=FBgn0032240.2.mrna1;Target=FBgn0032240.2 61 159 +
ChrX	stalkie_big_nohaplotig	CDS	19611384	19611710	.	+	0	Parent=FBgn0032240.2.mrna1;Target=FBgn0032240.2 160 486 +
ChrX	gffcl	locus	19612199	19613625	.	+	.	ID=RLOC_00001197;geneIDs=comp153333_c0_seq1.path1;transcripts=comp153333_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19612199	19613625	.	+	.	ID=comp153333_c0_seq1.mrna1;geneID=comp153333_c0_seq1.path1;Name=comp153333_c0_seq1;Dir=indeterminatecoverage=98.7;identity=99.9;matches=1425;mismatches=2;indels=0;unknowns=0;Target=comp153333_c0_seq1 1427 1 .;CDS_Target=comp153333_c0_seq1 625 497 .;locus=RLOC_00001197
ChrX	stalkie_big_nohaplotig	exon	19612199	19613625	99	+	.	Parent=comp153333_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19612695	19612823	.	+	0	Parent=comp153333_c0_seq1.mrna1
ChrX	gffcl	locus	19614187	19614935	.	+	.	ID=RLOC_00001198;geneIDs=comp157291_c0_seq1.path1;transcripts=comp157291_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19614187	19614935	.	+	.	ID=comp157291_c0_seq1.mrna1;geneID=comp157291_c0_seq1.path1;Name=comp157291_c0_seq1;Dir=indeterminatecoverage=96.2;identity=98.8;matches=743;mismatches=6;indels=3;unknowns=0;Target=comp157291_c0_seq1 752 1 .;CDS_Target=comp157291_c0_seq1 30 1 .;locus=RLOC_00001198
ChrX	stalkie_big_nohaplotig	exon	19614187	19614935	98	+	.	Parent=comp157291_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19614187	19614216	.	+	0	Parent=comp157291_c0_seq1.mrna1
ChrX	gffcl	locus	19615340	19617508	.	+	.	ID=RLOC_00001199;geneIDs=comp158718_c0_seq1.path1;transcripts=comp158718_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19615340	19617508	.	+	.	ID=comp158718_c0_seq1.mrna1;geneID=comp158718_c0_seq1.path1;Name=comp158718_c0_seq1;Dir=indeterminatecoverage=97.8;identity=99.8;matches=2165;mismatches=4;indels=0;unknowns=0;Target=comp158718_c0_seq1 2169 1 .;CDS_Target=comp158718_c0_seq1 708 511 .;locus=RLOC_00001199
ChrX	stalkie_big_nohaplotig	exon	19615340	19617508	99	+	.	Parent=comp158718_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19615850	19616047	.	+	0	Parent=comp158718_c0_seq1.mrna1
ChrX	gffcl	locus	19618675	19630804	.	-	.	ID=RLOC_00001200;geneIDs=FBgn0014906.1.path1;transcripts=FBgn0014906.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19618675	19630804	.	-	.	ID=FBgn0014906.1.mrna1;geneID=FBgn0014906.1.path1;Name=FBgn0014906.1;Dir=sensecoverage=100.0;identity=100.0;matches=1251;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001200
ChrX	stalkie_big_nohaplotig	exon	19618675	19618847	100	-	.	Parent=FBgn0014906.1.mrna1;Target=FBgn0014906.1 1079 1251 +
ChrX	stalkie_big_nohaplotig	exon	19620273	19620622	100	-	.	Parent=FBgn0014906.1.mrna1;Target=FBgn0014906.1 729 1078 +
ChrX	stalkie_big_nohaplotig	exon	19620738	19620924	100	-	.	Parent=FBgn0014906.1.mrna1;Target=FBgn0014906.1 542 728 +
ChrX	stalkie_big_nohaplotig	exon	19620985	19621152	100	-	.	Parent=FBgn0014906.1.mrna1;Target=FBgn0014906.1 374 541 +
ChrX	stalkie_big_nohaplotig	exon	19624673	19624842	100	-	.	Parent=FBgn0014906.1.mrna1;Target=FBgn0014906.1 204 373 +
ChrX	stalkie_big_nohaplotig	exon	19630602	19630804	100	-	.	Parent=FBgn0014906.1.mrna1;Target=FBgn0014906.1 1 203 +
ChrX	stalkie_big_nohaplotig	CDS	19618675	19618847	.	-	2	Parent=FBgn0014906.1.mrna1;Target=FBgn0014906.1 1079 1251 +
ChrX	stalkie_big_nohaplotig	CDS	19620273	19620622	.	-	1	Parent=FBgn0014906.1.mrna1;Target=FBgn0014906.1 729 1078 +
ChrX	stalkie_big_nohaplotig	CDS	19620738	19620924	.	-	2	Parent=FBgn0014906.1.mrna1;Target=FBgn0014906.1 542 728 +
ChrX	stalkie_big_nohaplotig	CDS	19620985	19621152	.	-	2	Parent=FBgn0014906.1.mrna1;Target=FBgn0014906.1 374 541 +
ChrX	stalkie_big_nohaplotig	CDS	19624673	19624842	.	-	1	Parent=FBgn0014906.1.mrna1;Target=FBgn0014906.1 204 373 +
ChrX	stalkie_big_nohaplotig	CDS	19630602	19630804	.	-	0	Parent=FBgn0014906.1.mrna1;Target=FBgn0014906.1 1 203 +
ChrX	gffcl	locus	19621129	19622393	.	+	.	ID=RLOC_00001201;geneIDs=comp90398_c0_seq1.path1;transcripts=comp90398_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19621129	19622393	.	+	.	ID=comp90398_c0_seq1.mrna1;geneID=comp90398_c0_seq1.path1;Name=comp90398_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=363;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001201
ChrX	stalkie_big_nohaplotig	exon	19621129	19621154	92	+	.	Parent=comp90398_c0_seq1.mrna1;Target=comp90398_c0_seq1 26 1 .
ChrX	stalkie_big_nohaplotig	exon	19622055	19622393	100	+	.	Parent=comp90398_c0_seq1.mrna1;Target=comp90398_c0_seq1 365 27 .
ChrX	stalkie_big_nohaplotig	CDS	19621130	19621154	.	+	0	Parent=comp90398_c0_seq1.mrna1;Target=comp90398_c0_seq1 26 2 .
ChrX	stalkie_big_nohaplotig	CDS	19622055	19622170	.	+	2	Parent=comp90398_c0_seq1.mrna1;Target=comp90398_c0_seq1 142 27 .
ChrX	gffcl	locus	19634006	19635163	.	-	.	ID=RLOC_00001202;geneIDs=comp145087_c0_seq1.path1;transcripts=comp145087_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19634006	19635163	.	-	.	ID=comp145087_c0_seq1.mrna1;geneID=comp145087_c0_seq1.path1;Name=comp145087_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1155;mismatches=3;indels=0;unknowns=0;Target=comp145087_c0_seq1 1158 1 .;CDS_Target=comp145087_c0_seq1 501 241 .;locus=RLOC_00001202
ChrX	stalkie_big_nohaplotig	exon	19634006	19635163	99	-	.	Parent=comp145087_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19634663	19634923	.	-	0	Parent=comp145087_c0_seq1.mrna1
ChrX	gffcl	locus	19635497	19636974	.	-	.	ID=RLOC_00001203;geneIDs=FBgn0021906.1.path1;transcripts=FBgn0021906.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19635497	19636974	.	-	.	ID=FBgn0021906.1.mrna1;geneID=FBgn0021906.1.path1;Name=FBgn0021906.1;Dir=sensecoverage=100.0;identity=100.0;matches=735;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001203
ChrX	stalkie_big_nohaplotig	exon	19635497	19635712	100	-	.	Parent=FBgn0021906.1.mrna1;Target=FBgn0021906.1 520 735 +
ChrX	stalkie_big_nohaplotig	exon	19635775	19636163	100	-	.	Parent=FBgn0021906.1.mrna1;Target=FBgn0021906.1 131 519 +
ChrX	stalkie_big_nohaplotig	exon	19636845	19636974	100	-	.	Parent=FBgn0021906.1.mrna1;Target=FBgn0021906.1 1 130 +
ChrX	stalkie_big_nohaplotig	CDS	19635497	19635712	.	-	0	Parent=FBgn0021906.1.mrna1;Target=FBgn0021906.1 520 735 +
ChrX	stalkie_big_nohaplotig	CDS	19635775	19636163	.	-	2	Parent=FBgn0021906.1.mrna1;Target=FBgn0021906.1 131 519 +
ChrX	stalkie_big_nohaplotig	CDS	19636845	19636974	.	-	0	Parent=FBgn0021906.1.mrna1;Target=FBgn0021906.1 1 130 +
ChrX	gffcl	locus	19807143	19821182	.	+	.	ID=RLOC_00001204;geneIDs=FBgn0086758.1.path1;transcripts=FBgn0086758.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19807143	19821182	.	+	.	ID=FBgn0086758.1.mrna1;geneID=FBgn0086758.1.path1;Name=FBgn0086758.1;Dir=sensecoverage=100.0;identity=99.9;matches=1685;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001204
ChrX	stalkie_big_nohaplotig	exon	19807143	19807311	100	+	.	Parent=FBgn0086758.1.mrna1;Target=FBgn0086758.1 1 169 +
ChrX	stalkie_big_nohaplotig	exon	19818242	19818459	100	+	.	Parent=FBgn0086758.1.mrna1;Target=FBgn0086758.1 170 387 +
ChrX	stalkie_big_nohaplotig	exon	19818615	19819270	100	+	.	Parent=FBgn0086758.1.mrna1;Target=FBgn0086758.1 388 1043 +
ChrX	stalkie_big_nohaplotig	exon	19819391	19819550	99	+	.	Parent=FBgn0086758.1.mrna1;Target=FBgn0086758.1 1044 1203 +
ChrX	stalkie_big_nohaplotig	exon	19820453	19820684	100	+	.	Parent=FBgn0086758.1.mrna1;Target=FBgn0086758.1 1204 1435 +
ChrX	stalkie_big_nohaplotig	exon	19820932	19821182	100	+	.	Parent=FBgn0086758.1.mrna1;Target=FBgn0086758.1 1436 1686 +
ChrX	stalkie_big_nohaplotig	CDS	19807143	19807311	.	+	0	Parent=FBgn0086758.1.mrna1;Target=FBgn0086758.1 1 169 +
ChrX	stalkie_big_nohaplotig	CDS	19818242	19818459	.	+	2	Parent=FBgn0086758.1.mrna1;Target=FBgn0086758.1 170 387 +
ChrX	stalkie_big_nohaplotig	CDS	19818615	19819270	.	+	0	Parent=FBgn0086758.1.mrna1;Target=FBgn0086758.1 388 1043 +
ChrX	stalkie_big_nohaplotig	CDS	19819391	19819550	.	+	1	Parent=FBgn0086758.1.mrna1;Target=FBgn0086758.1 1044 1203 +
ChrX	stalkie_big_nohaplotig	CDS	19820453	19820684	.	+	0	Parent=FBgn0086758.1.mrna1;Target=FBgn0086758.1 1204 1435 +
ChrX	stalkie_big_nohaplotig	CDS	19820932	19821182	.	+	2	Parent=FBgn0086758.1.mrna1;Target=FBgn0086758.1 1436 1686 +
ChrX	gffcl	locus	19836583	19837341	.	+	.	ID=RLOC_00001205;geneIDs=comp145228_c1_seq1.path1;transcripts=comp145228_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19836583	19837341	.	+	.	ID=comp145228_c1_seq1.mrna1;geneID=comp145228_c1_seq1.path1;Name=comp145228_c1_seq1;Dir=indeterminatecoverage=91.6;identity=99.9;matches=759;mismatches=0;indels=1;unknowns=0;Target=comp145228_c1_seq1 760 1 .;CDS_Target=comp145228_c1_seq1 344 192 .;locus=RLOC_00001205
ChrX	stalkie_big_nohaplotig	exon	19836583	19837341	99	+	.	Parent=comp145228_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19836774	19836926	.	+	0	Parent=comp145228_c1_seq1.mrna1
ChrX	gffcl	locus	19838387	19838869	.	+	.	ID=RLOC_00001206;geneIDs=comp147488_c0_seq1.path1;transcripts=comp147488_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19838387	19838869	.	+	.	ID=comp147488_c0_seq1.mrna1;geneID=comp147488_c0_seq1.path1;Name=comp147488_c0_seq1;Dir=indeterminatecoverage=95.8;identity=99.5;matches=442;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001206
ChrX	stalkie_big_nohaplotig	exon	19838387	19838513	99	+	.	Parent=comp147488_c0_seq1.mrna1;Target=comp147488_c0_seq1 147 21 .
ChrX	stalkie_big_nohaplotig	exon	19838553	19838869	99	+	.	Parent=comp147488_c0_seq1.mrna1;Target=comp147488_c0_seq1 472 156 .
ChrX	stalkie_big_nohaplotig	CDS	19838474	19838513	.	+	0	Parent=comp147488_c0_seq1.mrna1;Target=comp147488_c0_seq1 147 108 .
ChrX	stalkie_big_nohaplotig	CDS	19838553	19838576	.	+	2	Parent=comp147488_c0_seq1.mrna1;Target=comp147488_c0_seq1 179 156 .
ChrX	gffcl	locus	19842455	19842683	.	+	.	ID=RLOC_00001207;geneIDs=comp758481_c0_seq1.path1;transcripts=comp758481_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19842455	19842683	.	+	.	ID=comp758481_c0_seq1.mrna1;geneID=comp758481_c0_seq1.path1;Name=comp758481_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=229;mismatches=0;indels=0;unknowns=0;Target=comp758481_c0_seq1 229 1 .;CDS_Target=comp758481_c0_seq1 156 70 .;locus=RLOC_00001207
ChrX	stalkie_big_nohaplotig	exon	19842455	19842683	100	+	.	Parent=comp758481_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19842524	19842610	.	+	0	Parent=comp758481_c0_seq1.mrna1
ChrX	gffcl	locus	19842796	19844235	.	+	.	ID=RLOC_00001208;geneIDs=comp155158_c0_seq1.path1;transcripts=comp155158_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19842796	19844235	.	+	.	ID=comp155158_c0_seq1.mrna1;geneID=comp155158_c0_seq1.path1;Name=comp155158_c0_seq1;Dir=indeterminatecoverage=98.0;identity=98.3;matches=1417;mismatches=20;indels=4;unknowns=0;Target=comp155158_c0_seq1 1468 31 .;CDS_Target=comp155158_c0_seq1 1357 1235 .;locus=RLOC_00001208
ChrX	stalkie_big_nohaplotig	exon	19842796	19844235	98	+	.	Parent=comp155158_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19844001	19844124	.	+	0	Parent=comp155158_c0_seq1.mrna1
ChrX	gffcl	locus	19852914	19854742	.	-	.	ID=RLOC_00001209;geneIDs=comp159817_c1_seq1.path1;transcripts=comp159817_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19852914	19854742	.	-	.	ID=comp159817_c1_seq1.mrna1;geneID=comp159817_c1_seq1.path1;Name=comp159817_c1_seq1;Dir=indeterminatecoverage=68.3;identity=98.8;matches=1807;mismatches=7;indels=15;unknowns=0;Target=comp159817_c1_seq1 2656 843 .;CDS_Target=comp159817_c1_seq1 2164 1901 .;locus=RLOC_00001209
ChrX	stalkie_big_nohaplotig	exon	19852914	19854742	98	-	.	Parent=comp159817_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19853406	19853669	.	-	0	Parent=comp159817_c1_seq1.mrna1
ChrX	gffcl	locus	19855205	19855467	.	+	.	ID=RLOC_00001210;geneIDs=comp135415_c0_seq1.path1;transcripts=comp135415_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19855205	19855467	.	+	.	ID=comp135415_c0_seq1.mrna1;geneID=comp135415_c0_seq1.path1;Name=comp135415_c0_seq1;Dir=indeterminatecoverage=99.6;identity=92.8;matches=246;mismatches=16;indels=3;unknowns=0;Target=comp135415_c0_seq1 264 1 .;CDS_Target=comp135415_c0_seq1 144 25 .;locus=RLOC_00001210
ChrX	stalkie_big_nohaplotig	exon	19855205	19855467	92	+	.	Parent=comp135415_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19855229	19855347	.	+	0	Parent=comp135415_c0_seq1.mrna1
ChrX	gffcl	locus	19860562	19861221	.	+	.	ID=RLOC_00001211;geneIDs=AGAP005829.1.path1;transcripts=AGAP005829.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19860562	19861221	.	+	.	ID=AGAP005829.1.mrna1;geneID=AGAP005829.1.path1;Name=AGAP005829.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=660;mismatches=0;indels=0;unknowns=0;Target=AGAP005829.1 660 1 .;locus=RLOC_00001211
ChrX	stalkie_big_nohaplotig	exon	19860562	19861221	100	+	.	Parent=AGAP005829.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	19860562	19861221	.	+	0	Parent=AGAP005829.1.mrna1
ChrX	gffcl	locus	19956003	19958972	.	+	.	ID=RLOC_00001212;geneIDs=comp160043_c3_seq1.path1;transcripts=comp160043_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	19956003	19958972	.	+	.	ID=comp160043_c3_seq1.mrna1;geneID=comp160043_c3_seq1.path1;Name=comp160043_c3_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=1692;mismatches=11;indels=0;unknowns=0;locus=RLOC_00001212
ChrX	stalkie_big_nohaplotig	exon	19956003	19956235	96	+	.	Parent=comp160043_c3_seq1.mrna1;Target=comp160043_c3_seq1 1 233 +
ChrX	stalkie_big_nohaplotig	exon	19956791	19956855	100	+	.	Parent=comp160043_c3_seq1.mrna1;Target=comp160043_c3_seq1 234 298 +
ChrX	stalkie_big_nohaplotig	exon	19957331	19957704	100	+	.	Parent=comp160043_c3_seq1.mrna1;Target=comp160043_c3_seq1 299 672 +
ChrX	stalkie_big_nohaplotig	exon	19957769	19958070	99	+	.	Parent=comp160043_c3_seq1.mrna1;Target=comp160043_c3_seq1 673 974 +
ChrX	stalkie_big_nohaplotig	exon	19958181	19958672	99	+	.	Parent=comp160043_c3_seq1.mrna1;Target=comp160043_c3_seq1 975 1466 +
ChrX	stalkie_big_nohaplotig	exon	19958736	19958972	99	+	.	Parent=comp160043_c3_seq1.mrna1;Target=comp160043_c3_seq1 1467 1703 +
ChrX	stalkie_big_nohaplotig	CDS	19957682	19957704	.	+	0	Parent=comp160043_c3_seq1.mrna1;Target=comp160043_c3_seq1 650 672 +
ChrX	stalkie_big_nohaplotig	CDS	19957769	19957916	.	+	1	Parent=comp160043_c3_seq1.mrna1;Target=comp160043_c3_seq1 673 820 +
ChrX	gffcl	locus	20133229	20148714	.	+	.	ID=RLOC_00001213;geneIDs=FBgn0000287.1.path1;transcripts=FBgn0000287.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20133229	20148714	.	+	.	ID=FBgn0000287.1.mrna1;geneID=FBgn0000287.1.path1;Name=FBgn0000287.1;Dir=sensecoverage=100.0;identity=99.7;matches=3407;mismatches=10;indels=0;unknowns=0;locus=RLOC_00001213
ChrX	stalkie_big_nohaplotig	exon	20133229	20136055	99	+	.	Parent=FBgn0000287.1.mrna1;Target=FBgn0000287.1 1 2827 +
ChrX	stalkie_big_nohaplotig	exon	20138204	20138385	100	+	.	Parent=FBgn0000287.1.mrna1;Target=FBgn0000287.1 2828 3009 +
ChrX	stalkie_big_nohaplotig	exon	20148307	20148714	99	+	.	Parent=FBgn0000287.1.mrna1;Target=FBgn0000287.1 3010 3417 +
ChrX	stalkie_big_nohaplotig	CDS	20133229	20136055	.	+	0	Parent=FBgn0000287.1.mrna1;Target=FBgn0000287.1 1 2827 +
ChrX	stalkie_big_nohaplotig	CDS	20138204	20138385	.	+	2	Parent=FBgn0000287.1.mrna1;Target=FBgn0000287.1 2828 3009 +
ChrX	stalkie_big_nohaplotig	CDS	20148307	20148714	.	+	0	Parent=FBgn0000287.1.mrna1;Target=FBgn0000287.1 3010 3417 +
ChrX	gffcl	locus	20283730	20284399	.	-	.	ID=RLOC_00001214;geneIDs=comp155557_c0_seq1.path1;transcripts=comp155557_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20283730	20284399	.	-	.	ID=comp155557_c0_seq1.mrna1;geneID=comp155557_c0_seq1.path1;Name=comp155557_c0_seq1;Dir=antisensecoverage=92.9;identity=98.2;matches=606;mismatches=11;indels=0;unknowns=0;locus=RLOC_00001214
ChrX	stalkie_big_nohaplotig	exon	20283730	20284133	98	-	.	Parent=comp155557_c0_seq1.mrna1;Target=comp155557_c0_seq1 48 451 -
ChrX	stalkie_big_nohaplotig	exon	20284187	20284399	97	-	.	Parent=comp155557_c0_seq1.mrna1;Target=comp155557_c0_seq1 452 664 -
ChrX	stalkie_big_nohaplotig	CDS	20283849	20284133	.	-	0	Parent=comp155557_c0_seq1.mrna1;Target=comp155557_c0_seq1 167 451 .
ChrX	stalkie_big_nohaplotig	CDS	20284187	20284315	.	-	0	Parent=comp155557_c0_seq1.mrna1;Target=comp155557_c0_seq1 452 580 .
ChrX	gffcl	locus	20330537	20331702	.	+	.	ID=RLOC_00001215;geneIDs=FBgn0035348.3.path1;transcripts=FBgn0035348.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20330537	20331702	.	+	.	ID=FBgn0035348.3.mrna1;geneID=FBgn0035348.3.path1;Name=FBgn0035348.3;Dir=sensecoverage=100.0;identity=99.9;matches=1091;mismatches=0;indels=1;unknowns=0;locus=RLOC_00001215
ChrX	stalkie_big_nohaplotig	exon	20330537	20330661	100	+	.	Parent=FBgn0035348.3.mrna1;Target=FBgn0035348.3 1 125 +
ChrX	stalkie_big_nohaplotig	exon	20330737	20331702	99	+	.	Parent=FBgn0035348.3.mrna1;Target=FBgn0035348.3 126 1092 +
ChrX	stalkie_big_nohaplotig	CDS	20330537	20330661	.	+	0	Parent=FBgn0035348.3.mrna1;Target=FBgn0035348.3 1 125 +
ChrX	stalkie_big_nohaplotig	CDS	20330737	20331702	.	+	1	Parent=FBgn0035348.3.mrna1;Target=FBgn0035348.3 126 1092 +
ChrX	gffcl	locus	20345112	20345987	.	+	.	ID=RLOC_00001216;geneIDs=ORF2240.path1;transcripts=ORF2240.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20345112	20345987	.	+	.	ID=ORF2240.mrna1;geneID=ORF2240.path1;Name=ORF2240;Dir=indeterminatecoverage=98.0;identity=99.1;matches=868;mismatches=8;indels=0;unknowns=0;Target=ORF2240 894 19 .;locus=RLOC_00001216
ChrX	stalkie_big_nohaplotig	exon	20345112	20345987	99	+	.	Parent=ORF2240.mrna1
ChrX	stalkie_big_nohaplotig	CDS	20345112	20345987	.	+	0	Parent=ORF2240.mrna1
ChrX	gffcl	locus	20358818	20359258	.	+	.	ID=RLOC_00001217;geneIDs=comp152683_c0_seq1.path1;transcripts=comp152683_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20358818	20359258	.	+	.	ID=comp152683_c0_seq1.mrna1;geneID=comp152683_c0_seq1.path1;Name=comp152683_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=440;mismatches=1;indels=0;unknowns=0;Target=comp152683_c0_seq1 441 1 .;CDS_Target=comp152683_c0_seq1 240 1 .;locus=RLOC_00001217
ChrX	stalkie_big_nohaplotig	exon	20358818	20359258	99	+	.	Parent=comp152683_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	20358818	20359057	.	+	0	Parent=comp152683_c0_seq1.mrna1
ChrX	gffcl	locus	20359973	20360738	.	+	.	ID=RLOC_00001218;geneIDs=comp152075_c0_seq1.path1;transcripts=comp152075_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20359973	20360738	.	+	.	ID=comp152075_c0_seq1.mrna1;geneID=comp152075_c0_seq1.path1;Name=comp152075_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=766;mismatches=0;indels=1;unknowns=0;Target=comp152075_c0_seq1 767 1 .;CDS_Target=comp152075_c0_seq1 292 176 .;locus=RLOC_00001218
ChrX	stalkie_big_nohaplotig	exon	20359973	20360738	99	+	.	Parent=comp152075_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	20360148	20360264	.	+	0	Parent=comp152075_c0_seq1.mrna1
ChrX	gffcl	locus	20390872	20391517	.	-	.	ID=RLOC_00001220;geneIDs=comp136537_c0_seq1.path1;transcripts=comp136537_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20390872	20391517	.	-	.	ID=comp136537_c0_seq1.mrna1;geneID=comp136537_c0_seq1.path1;Name=comp136537_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.4;matches=628;mismatches=17;indels=13;unknowns=0;Target=comp136537_c0_seq1 657 1 .;CDS_Target=comp136537_c0_seq1 501 391 .;locus=RLOC_00001220
ChrX	stalkie_big_nohaplotig	exon	20390872	20391517	95	-	.	Parent=comp136537_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	20391028	20391139	.	-	0	Parent=comp136537_c0_seq1.mrna1
ChrX	gffcl	locus	20403322	20403961	.	-	.	ID=RLOC_00001221;geneIDs=comp136729_c2_seq1.path1;transcripts=comp136729_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20403322	20403961	.	-	.	ID=comp136729_c2_seq1.mrna1;geneID=comp136729_c2_seq1.path1;Name=comp136729_c2_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=622;mismatches=2;indels=16;unknowns=0;Target=comp136729_c2_seq1 624 1 .;CDS_Target=comp136729_c2_seq1 101 3 .;locus=RLOC_00001221
ChrX	stalkie_big_nohaplotig	exon	20403322	20403961	97	-	.	Parent=comp136729_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	20403845	20403959	.	-	0	Parent=comp136729_c2_seq1.mrna1
ChrX	gffcl	locus	20434525	20435559	.	-	.	ID=RLOC_00001222;geneIDs=FBgn0035348.4.path1;transcripts=FBgn0035348.4.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20434525	20435559	.	-	.	ID=FBgn0035348.4.mrna1;geneID=FBgn0035348.4.path1;Name=FBgn0035348.4;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1034;mismatches=1;indels=0;unknowns=0;Target=FBgn0035348.4 1035 1 .;locus=RLOC_00001222
ChrX	stalkie_big_nohaplotig	exon	20434525	20435559	99	-	.	Parent=FBgn0035348.4.mrna1
ChrX	stalkie_big_nohaplotig	CDS	20434525	20435559	.	-	0	Parent=FBgn0035348.4.mrna1
ChrX	gffcl	locus	20556991	20557948	.	+	.	ID=RLOC_00001225;geneIDs=comp152253_c0_seq1.path1;transcripts=comp152253_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20556991	20557948	.	+	.	ID=comp152253_c0_seq1.mrna1;geneID=comp152253_c0_seq1.path1;Name=comp152253_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.2;matches=950;mismatches=8;indels=0;unknowns=0;Target=comp152253_c0_seq1 959 2 .;CDS_Target=comp152253_c0_seq1 173 81 .;locus=RLOC_00001225
ChrX	stalkie_big_nohaplotig	exon	20556991	20557948	99	+	.	Parent=comp152253_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	20557070	20557162	.	+	0	Parent=comp152253_c0_seq1.mrna1
ChrX	gffcl	locus	20559602	20560185	.	+	.	ID=RLOC_00001226;geneIDs=comp106299_c0_seq1.path1;transcripts=comp106299_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20559602	20560185	.	+	.	ID=comp106299_c0_seq1.mrna1;geneID=comp106299_c0_seq1.path1;Name=comp106299_c0_seq1;Dir=indeterminatecoverage=95.3;identity=99.3;matches=580;mismatches=4;indels=0;unknowns=0;Target=comp106299_c0_seq1 584 1 .;CDS_Target=comp106299_c0_seq1 433 74 .;locus=RLOC_00001226
ChrX	stalkie_big_nohaplotig	exon	20559602	20560185	99	+	.	Parent=comp106299_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	20559675	20560034	.	+	0	Parent=comp106299_c0_seq1.mrna1
ChrX	gffcl	locus	20575622	20576134	.	-	.	ID=RLOC_00001227;geneIDs=comp144369_c0_seq1.path1;transcripts=comp144369_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20575622	20576134	.	-	.	ID=comp144369_c0_seq1.mrna1;geneID=comp144369_c0_seq1.path1;Name=comp144369_c0_seq1;Dir=indeterminatecoverage=92.1;identity=99.2;matches=509;mismatches=4;indels=0;unknowns=0;Target=comp144369_c0_seq1 516 4 .;CDS_Target=comp144369_c0_seq1 470 297 .;locus=RLOC_00001227
ChrX	stalkie_big_nohaplotig	exon	20575622	20576134	99	-	.	Parent=comp144369_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	20575668	20575841	.	-	0	Parent=comp144369_c0_seq1.mrna1
ChrX	gffcl	locus	20576647	20584704	.	-	.	ID=RLOC_00001228;geneIDs=comp155231_c0_seq1.path1;transcripts=comp155231_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20576647	20584704	.	-	.	ID=comp155231_c0_seq1.mrna1;geneID=comp155231_c0_seq1.path1;Name=comp155231_c0_seq1;Dir=sensecoverage=100.0;identity=98.4;matches=820;mismatches=13;indels=0;unknowns=0;Target=comp155231_c0_seq1 3 137 +;locus=RLOC_00001228
ChrX	stalkie_big_nohaplotig	exon	20576647	20577031	96	-	.	Parent=comp155231_c0_seq1.mrna1;Target=comp155231_c0_seq1 449 833 +
ChrX	stalkie_big_nohaplotig	exon	20580861	20581149	100	-	.	Parent=comp155231_c0_seq1.mrna1;Target=comp155231_c0_seq1 160 448 +
ChrX	stalkie_big_nohaplotig	exon	20584546	20584704	100	-	.	Parent=comp155231_c0_seq1.mrna1;Target=comp155231_c0_seq1 1 159 +
ChrX	stalkie_big_nohaplotig	CDS	20584568	20584702	.	-	0	Parent=comp155231_c0_seq1.mrna1
ChrX	gffcl	locus	20583622	20584020	.	-	.	ID=RLOC_00001229;geneIDs=comp143878_c0_seq1.path1;transcripts=comp143878_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20583622	20584020	.	-	.	ID=comp143878_c0_seq1.mrna1;geneID=comp143878_c0_seq1.path1;Name=comp143878_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.5;matches=397;mismatches=2;indels=0;unknowns=0;Target=comp143878_c0_seq1 400 2 .;CDS_Target=comp143878_c0_seq1 258 142 .;locus=RLOC_00001229
ChrX	stalkie_big_nohaplotig	exon	20583622	20584020	99	-	.	Parent=comp143878_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	20583764	20583880	.	-	0	Parent=comp143878_c0_seq1.mrna1
ChrX	gffcl	locus	20585115	20585658	.	-	.	ID=RLOC_00001230;geneIDs=comp115515_c0_seq1.path1;transcripts=comp115515_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20585115	20585658	.	-	.	ID=comp115515_c0_seq1.mrna1;geneID=comp115515_c0_seq1.path1;Name=comp115515_c0_seq1;Dir=indeterminatecoverage=97.1;identity=99.3;matches=540;mismatches=4;indels=0;unknowns=0;Target=comp115515_c0_seq1 544 1 .;CDS_Target=comp115515_c0_seq1 401 276 .;locus=RLOC_00001230
ChrX	stalkie_big_nohaplotig	exon	20585115	20585658	99	-	.	Parent=comp115515_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	20585258	20585383	.	-	0	Parent=comp115515_c0_seq1.mrna1
ChrX	gffcl	locus	20589569	20590362	.	-	.	ID=RLOC_00001231;geneIDs=comp149612_c0_seq1.path1;transcripts=comp149612_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20589569	20590362	.	-	.	ID=comp149612_c0_seq1.mrna1;geneID=comp149612_c0_seq1.path1;Name=comp149612_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.4;matches=786;mismatches=2;indels=11;unknowns=0;Target=comp149612_c0_seq1 796 4 .;CDS_Target=comp149612_c0_seq1 686 582 .;locus=RLOC_00001231
ChrX	stalkie_big_nohaplotig	exon	20589569	20590362	98	-	.	Parent=comp149612_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	20589679	20589783	.	-	0	Parent=comp149612_c0_seq1.mrna1
ChrX	gffcl	locus	20597036	20597549	.	-	.	ID=RLOC_00001232;geneIDs=comp150161_c0_seq1.path1;transcripts=comp150161_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20597036	20597549	.	-	.	ID=comp150161_c0_seq1.mrna1;geneID=comp150161_c0_seq1.path1;Name=comp150161_c0_seq1;Dir=indeterminatecoverage=96.3;identity=99.8;matches=513;mismatches=1;indels=0;unknowns=0;Target=comp150161_c0_seq1 515 2 .;CDS_Target=comp150161_c0_seq1 407 78 .;locus=RLOC_00001232
ChrX	stalkie_big_nohaplotig	exon	20597036	20597549	99	-	.	Parent=comp150161_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	20597144	20597473	.	-	0	Parent=comp150161_c0_seq1.mrna1
ChrX	gffcl	locus	20635617	20636123	.	-	.	ID=RLOC_00001233;geneIDs=comp146586_c1_seq1.path1;transcripts=comp146586_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20635617	20636123	.	-	.	ID=comp146586_c1_seq1.mrna1;geneID=comp146586_c1_seq1.path1;Name=comp146586_c1_seq1;Dir=indeterminatecoverage=99.4;identity=99.8;matches=506;mismatches=1;indels=0;unknowns=0;Target=comp146586_c1_seq1 508 2 .;CDS_Target=comp146586_c1_seq1 202 2 .;locus=RLOC_00001233
ChrX	stalkie_big_nohaplotig	exon	20635617	20636123	99	-	.	Parent=comp146586_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	20635923	20636123	.	-	0	Parent=comp146586_c1_seq1.mrna1
ChrX	gffcl	locus	20636864	20644813	.	-	.	ID=RLOC_00001234;geneIDs=FBgn0032361.1.path1;transcripts=FBgn0032361.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20636864	20644813	.	-	.	ID=FBgn0032361.1.mrna1;geneID=FBgn0032361.1.path1;Name=FBgn0032361.1;Dir=sensecoverage=100.0;identity=99.6;matches=1900;mismatches=8;indels=0;unknowns=0;locus=RLOC_00001234
ChrX	stalkie_big_nohaplotig	exon	20636864	20637703	99	-	.	Parent=FBgn0032361.1.mrna1;Target=FBgn0032361.1 1069 1908 +
ChrX	stalkie_big_nohaplotig	exon	20641379	20641629	100	-	.	Parent=FBgn0032361.1.mrna1;Target=FBgn0032361.1 818 1068 +
ChrX	stalkie_big_nohaplotig	exon	20643885	20644098	99	-	.	Parent=FBgn0032361.1.mrna1;Target=FBgn0032361.1 604 817 +
ChrX	stalkie_big_nohaplotig	exon	20644154	20644626	99	-	.	Parent=FBgn0032361.1.mrna1;Target=FBgn0032361.1 131 603 +
ChrX	stalkie_big_nohaplotig	exon	20644684	20644813	100	-	.	Parent=FBgn0032361.1.mrna1;Target=FBgn0032361.1 1 130 +
ChrX	stalkie_big_nohaplotig	CDS	20636864	20637703	.	-	0	Parent=FBgn0032361.1.mrna1;Target=FBgn0032361.1 1069 1908 +
ChrX	stalkie_big_nohaplotig	CDS	20641379	20641629	.	-	2	Parent=FBgn0032361.1.mrna1;Target=FBgn0032361.1 818 1068 +
ChrX	stalkie_big_nohaplotig	CDS	20643885	20644098	.	-	0	Parent=FBgn0032361.1.mrna1;Target=FBgn0032361.1 604 817 +
ChrX	stalkie_big_nohaplotig	CDS	20644154	20644626	.	-	2	Parent=FBgn0032361.1.mrna1;Target=FBgn0032361.1 131 603 +
ChrX	stalkie_big_nohaplotig	CDS	20644684	20644813	.	-	0	Parent=FBgn0032361.1.mrna1;Target=FBgn0032361.1 1 130 +
ChrX	gffcl	locus	20680487	20680869	.	-	.	ID=RLOC_00001235;geneIDs=comp118212_c0_seq1.path1;transcripts=comp118212_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20680487	20680869	.	-	.	ID=comp118212_c0_seq1.mrna1;geneID=comp118212_c0_seq1.path1;Name=comp118212_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=382;mismatches=1;indels=0;unknowns=0;Target=comp118212_c0_seq1 383 1 .;CDS_Target=comp118212_c0_seq1 383 273 .;locus=RLOC_00001235
ChrX	stalkie_big_nohaplotig	exon	20680487	20680869	99	-	.	Parent=comp118212_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	20680487	20680597	.	-	0	Parent=comp118212_c0_seq1.mrna1
ChrX	gffcl	locus	20683110	20683757	.	-	.	ID=RLOC_00001236;geneIDs=comp147823_c1_seq1.path1;transcripts=comp147823_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20683110	20683757	.	-	.	ID=comp147823_c1_seq1.mrna1;geneID=comp147823_c1_seq1.path1;Name=comp147823_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=643;mismatches=5;indels=0;unknowns=0;Target=comp147823_c1_seq1 648 1 .;CDS_Target=comp147823_c1_seq1 277 2 .;locus=RLOC_00001236
ChrX	stalkie_big_nohaplotig	exon	20683110	20683757	99	-	.	Parent=comp147823_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	20683481	20683756	.	-	0	Parent=comp147823_c1_seq1.mrna1
ChrX	gffcl	locus	20744500	20922751	.	-	.	ID=RLOC_00001238;geneIDs=FBgn0027363.1.path2,comp146658_c0_seq1.path1,comp156808_c3_seq1.path1;transcripts=comp156808_c3_seq1.mrna1,FBgn0027363.1.mrna2,comp146658_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20744500	20922751	.	-	.	ID=comp156808_c3_seq1.mrna1;geneID=comp156808_c3_seq1.path1;Name=comp156808_c3_seq1;Dir=indeterminatecoverage=100.0;identity=92.1;matches=1217;mismatches=29;indels=76;unknowns=0;Target=comp156808_c3_seq1 145 2 .;locus=RLOC_00001238
ChrX	stalkie_big_nohaplotig	exon	20744500	20745053	91	-	.	Parent=comp156808_c3_seq1.mrna1;Target=comp156808_c3_seq1 1363 844 .
ChrX	stalkie_big_nohaplotig	exon	20796502	20796511	100	-	.	Parent=comp156808_c3_seq1.mrna1;Target=comp156808_c3_seq1 833 824 .
ChrX	stalkie_big_nohaplotig	exon	20798889	20798891	100	-	.	Parent=comp156808_c3_seq1.mrna1;Target=comp156808_c3_seq1 823 821 .
ChrX	stalkie_big_nohaplotig	exon	20800007	20800009	100	-	.	Parent=comp156808_c3_seq1.mrna1;Target=comp156808_c3_seq1 820 818 .
ChrX	stalkie_big_nohaplotig	exon	20815526	20815529	100	-	.	Parent=comp156808_c3_seq1.mrna1;Target=comp156808_c3_seq1 817 814 .
ChrX	stalkie_big_nohaplotig	exon	20816784	20816786	100	-	.	Parent=comp156808_c3_seq1.mrna1;Target=comp156808_c3_seq1 813 811 .
ChrX	stalkie_big_nohaplotig	exon	20828799	20828802	100	-	.	Parent=comp156808_c3_seq1.mrna1;Target=comp156808_c3_seq1 731 728 .
ChrX	stalkie_big_nohaplotig	exon	20832688	20832702	80	-	.	Parent=comp156808_c3_seq1.mrna1;Target=comp156808_c3_seq1 727 713 .
ChrX	stalkie_big_nohaplotig	exon	20858479	20858487	88	-	.	Parent=comp156808_c3_seq1.mrna1;Target=comp156808_c3_seq1 712 704 .
ChrX	stalkie_big_nohaplotig	exon	20885266	20885269	100	-	.	Parent=comp156808_c3_seq1.mrna1;Target=comp156808_c3_seq1 703 700 .
ChrX	stalkie_big_nohaplotig	exon	20887551	20887553	100	-	.	Parent=comp156808_c3_seq1.mrna1;Target=comp156808_c3_seq1 699 697 .
ChrX	stalkie_big_nohaplotig	exon	20889013	20889017	100	-	.	Parent=comp156808_c3_seq1.mrna1;Target=comp156808_c3_seq1 696 692 .
ChrX	stalkie_big_nohaplotig	exon	20896808	20896817	90	-	.	Parent=comp156808_c3_seq1.mrna1;Target=comp156808_c3_seq1 691 682 .
ChrX	stalkie_big_nohaplotig	exon	20904908	20904913	100	-	.	Parent=comp156808_c3_seq1.mrna1;Target=comp156808_c3_seq1 681 676 .
ChrX	stalkie_big_nohaplotig	exon	20906817	20906836	55	-	.	Parent=comp156808_c3_seq1.mrna1;Target=comp156808_c3_seq1 669 659 .
ChrX	stalkie_big_nohaplotig	exon	20922107	20922751	93	-	.	Parent=comp156808_c3_seq1.mrna1;Target=comp156808_c3_seq1 658 1 .
ChrX	stalkie_big_nohaplotig	CDS	20922619	20922750	.	-	0	Parent=comp156808_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20795126	20798060	.	-	.	ID=FBgn0027363.1.mrna2;geneID=FBgn0027363.1.path2;Name=FBgn0027363.1;Dir=sensecoverage=97.2;identity=100.0;matches=1721;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001238
ChrX	stalkie_big_nohaplotig	exon	20795126	20795274	100	-	.	Parent=FBgn0027363.1.mrna2;Target=FBgn0027363.1 1622 1770 +
ChrX	stalkie_big_nohaplotig	exon	20796339	20797335	100	-	.	Parent=FBgn0027363.1.mrna2;Target=FBgn0027363.1 625 1621 +
ChrX	stalkie_big_nohaplotig	exon	20797404	20797700	100	-	.	Parent=FBgn0027363.1.mrna2;Target=FBgn0027363.1 328 624 +
ChrX	stalkie_big_nohaplotig	exon	20797783	20798060	100	-	.	Parent=FBgn0027363.1.mrna2;Target=FBgn0027363.1 50 327 +
ChrX	stalkie_big_nohaplotig	CDS	20795126	20795274	.	-	1	Parent=FBgn0027363.1.mrna2;Target=FBgn0027363.1 1622 1770 +
ChrX	stalkie_big_nohaplotig	CDS	20796339	20797335	.	-	2	Parent=FBgn0027363.1.mrna2;Target=FBgn0027363.1 625 1621 +
ChrX	stalkie_big_nohaplotig	CDS	20797404	20797700	.	-	2	Parent=FBgn0027363.1.mrna2;Target=FBgn0027363.1 328 624 +
ChrX	stalkie_big_nohaplotig	CDS	20797783	20798060	.	-	1	Parent=FBgn0027363.1.mrna2;Target=FBgn0027363.1 50 327 +
ChrX	stalkie_big_nohaplotig	mRNA	20815462	20816057	.	-	.	ID=comp146658_c0_seq1.mrna1;geneID=comp146658_c0_seq1.path1;Name=comp146658_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=425;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001238
ChrX	stalkie_big_nohaplotig	exon	20815462	20815663	100	-	.	Parent=comp146658_c0_seq1.mrna1;Target=comp146658_c0_seq1 225 426 +
ChrX	stalkie_big_nohaplotig	exon	20815834	20816057	99	-	.	Parent=comp146658_c0_seq1.mrna1;Target=comp146658_c0_seq1 1 224 +
ChrX	stalkie_big_nohaplotig	CDS	20815497	20815663	.	-	2	Parent=comp146658_c0_seq1.mrna1;Target=comp146658_c0_seq1 225 391 +
ChrX	stalkie_big_nohaplotig	CDS	20815834	20815960	.	-	0	Parent=comp146658_c0_seq1.mrna1;Target=comp146658_c0_seq1 98 224 +
ChrX	stalkie_big_nohaplotig	mRNA	20968467	20969898	.	-	.	ID=comp151239_c0_seq1.mrna1;geneID=comp151239_c0_seq1.path1;Name=comp151239_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=783;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001240
ChrX	stalkie_big_nohaplotig	exon	20968467	20969211	99	-	.	Parent=comp151239_c0_seq1.mrna1;Target=comp151239_c0_seq1 40 784 +
ChrX	stalkie_big_nohaplotig	exon	20969860	20969898	100	-	.	Parent=comp151239_c0_seq1.mrna1;Target=comp151239_c0_seq1 1 39 +
ChrX	stalkie_big_nohaplotig	CDS	20969034	20969211	.	-	1	Parent=comp151239_c0_seq1.mrna1;Target=comp151239_c0_seq1 40 217 +
ChrX	stalkie_big_nohaplotig	CDS	20969860	20969897	.	-	0	Parent=comp151239_c0_seq1.mrna1;Target=comp151239_c0_seq1 2 39 +
ChrX	stalkie_big_nohaplotig	mRNA	20980944	20984337	.	-	.	ID=ORF1457.mrna1;geneID=ORF1457.path1;Name=ORF1457;Dir=sensecoverage=100.0;identity=99.8;matches=1096;mismatches=1;indels=1;unknowns=0;locus=RLOC_00001240
ChrX	stalkie_big_nohaplotig	exon	20980944	20981006	100	-	.	Parent=ORF1457.mrna1;Target=ORF1457 1036 1098 +
ChrX	stalkie_big_nohaplotig	exon	20981465	20982070	100	-	.	Parent=ORF1457.mrna1;Target=ORF1457 430 1035 +
ChrX	stalkie_big_nohaplotig	exon	20982164	20982396	99	-	.	Parent=ORF1457.mrna1;Target=ORF1457 196 429 +
ChrX	stalkie_big_nohaplotig	exon	20984143	20984337	100	-	.	Parent=ORF1457.mrna1;Target=ORF1457 1 195 +
ChrX	stalkie_big_nohaplotig	CDS	20980944	20981006	.	-	0	Parent=ORF1457.mrna1;Target=ORF1457 1036 1098 +
ChrX	stalkie_big_nohaplotig	CDS	20981465	20982070	.	-	0	Parent=ORF1457.mrna1;Target=ORF1457 430 1035 +
ChrX	stalkie_big_nohaplotig	CDS	20982164	20982364	.	-	0	Parent=ORF1457.mrna1;Target=ORF1457 229 429 +
ChrX	stalkie_big_nohaplotig	mRNA	22583735	22584542	.	-	.	ID=FBgn0032049.2.mrna1;geneID=FBgn0032049.2.path1;Name=FBgn0032049.2;Dir=sensecoverage=100.0;identity=99.7;matches=706;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001240
ChrX	stalkie_big_nohaplotig	exon	22583735	22584426	99	-	.	Parent=FBgn0032049.2.mrna1;Target=FBgn0032049.2 17 708 +
ChrX	stalkie_big_nohaplotig	exon	22584527	22584542	100	-	.	Parent=FBgn0032049.2.mrna1;Target=FBgn0032049.2 1 16 +
ChrX	stalkie_big_nohaplotig	CDS	22583735	22584426	.	-	2	Parent=FBgn0032049.2.mrna1;Target=FBgn0032049.2 17 708 +
ChrX	stalkie_big_nohaplotig	CDS	22584527	22584542	.	-	0	Parent=FBgn0032049.2.mrna1;Target=FBgn0032049.2 1 16 +
ChrX	stalkie_big_nohaplotig	mRNA	22593268	22594401	.	-	.	ID=FBgn0032049.1.mrna1;geneID=FBgn0032049.1.path1;Name=FBgn0032049.1;Dir=indeterminatecoverage=99.7;identity=99.9;matches=1133;mismatches=1;indels=0;unknowns=0;Target=FBgn0032049.1 1137 4 .;locus=RLOC_00001240
ChrX	stalkie_big_nohaplotig	exon	22593268	22594401	99	-	.	Parent=FBgn0032049.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	22593268	22594401	.	-	0	Parent=FBgn0032049.1.mrna1
ChrX	gffcl	locus	20758579	21121279	.	-	.	ID=RLOC_00001241;geneIDs=comp162971_c2_seq1.path1;transcripts=comp162971_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20758579	21121279	.	-	.	ID=comp162971_c2_seq1.mrna1;geneID=comp162971_c2_seq1.path1;Name=comp162971_c2_seq1;Dir=indeterminatecoverage=36.4;identity=96.4;matches=824;mismatches=16;indels=15;unknowns=0;Target=comp162971_c2_seq1 2358 2346 .;locus=RLOC_00001241
ChrX	stalkie_big_nohaplotig	exon	20758579	20758877	98	-	.	Parent=comp162971_c2_seq1.mrna1;Target=comp162971_c2_seq1 3686 3388 .
ChrX	stalkie_big_nohaplotig	exon	20760862	20761250	99	-	.	Parent=comp162971_c2_seq1.mrna1;Target=comp162971_c2_seq1 3387 2999 .
ChrX	stalkie_big_nohaplotig	exon	20770364	20770369	100	-	.	Parent=comp162971_c2_seq1.mrna1;Target=comp162971_c2_seq1 2998 2993 .
ChrX	stalkie_big_nohaplotig	exon	20793015	20793022	100	-	.	Parent=comp162971_c2_seq1.mrna1;Target=comp162971_c2_seq1 2985 2978 .
ChrX	stalkie_big_nohaplotig	exon	20802573	20802578	100	-	.	Parent=comp162971_c2_seq1.mrna1;Target=comp162971_c2_seq1 2977 2972 .
ChrX	stalkie_big_nohaplotig	exon	20960725	20960734	90	-	.	Parent=comp162971_c2_seq1.mrna1;Target=comp162971_c2_seq1 2849 2840 .
ChrX	stalkie_big_nohaplotig	exon	20980353	20980361	100	-	.	Parent=comp162971_c2_seq1.mrna1;Target=comp162971_c2_seq1 2821 2813 .
ChrX	stalkie_big_nohaplotig	exon	20992869	20992873	100	-	.	Parent=comp162971_c2_seq1.mrna1;Target=comp162971_c2_seq1 2760 2756 .
ChrX	stalkie_big_nohaplotig	exon	21000041	21000073	61	-	.	Parent=comp162971_c2_seq1.mrna1;Target=comp162971_c2_seq1 2755 2717 .
ChrX	stalkie_big_nohaplotig	exon	21000161	21000172	100	-	.	Parent=comp162971_c2_seq1.mrna1;Target=comp162971_c2_seq1 2716 2705 .
ChrX	stalkie_big_nohaplotig	exon	21001147	21001155	100	-	.	Parent=comp162971_c2_seq1.mrna1;Target=comp162971_c2_seq1 2704 2696 .
ChrX	stalkie_big_nohaplotig	exon	21012715	21012722	100	-	.	Parent=comp162971_c2_seq1.mrna1;Target=comp162971_c2_seq1 2695 2688 .
ChrX	stalkie_big_nohaplotig	exon	21113245	21113254	100	-	.	Parent=comp162971_c2_seq1.mrna1;Target=comp162971_c2_seq1 2550 2541 .
ChrX	stalkie_big_nohaplotig	exon	21113267	21113274	100	-	.	Parent=comp162971_c2_seq1.mrna1;Target=comp162971_c2_seq1 2491 2484 .
ChrX	stalkie_big_nohaplotig	exon	21114592	21114601	100	-	.	Parent=comp162971_c2_seq1.mrna1;Target=comp162971_c2_seq1 2479 2470 .
ChrX	stalkie_big_nohaplotig	exon	21121258	21121279	59	-	.	Parent=comp162971_c2_seq1.mrna1;Target=comp162971_c2_seq1 2358 2346 .
ChrX	stalkie_big_nohaplotig	CDS	21121258	21121279	.	-	0	Parent=comp162971_c2_seq1.mrna1
ChrX	gffcl	locus	20764282	20768460	.	-	.	ID=RLOC_00001242;geneIDs=FBgn0027453.1.path1;transcripts=FBgn0027453.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20764282	20768460	.	-	.	ID=FBgn0027453.1.mrna1;geneID=FBgn0027453.1.path1;Name=FBgn0027453.1;Dir=sensecoverage=100.0;identity=100.0;matches=867;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001242
ChrX	stalkie_big_nohaplotig	exon	20764282	20764549	100	-	.	Parent=FBgn0027453.1.mrna1;Target=FBgn0027453.1 600 867 +
ChrX	stalkie_big_nohaplotig	exon	20766144	20766578	100	-	.	Parent=FBgn0027453.1.mrna1;Target=FBgn0027453.1 165 599 +
ChrX	stalkie_big_nohaplotig	exon	20766644	20766766	100	-	.	Parent=FBgn0027453.1.mrna1;Target=FBgn0027453.1 42 164 +
ChrX	stalkie_big_nohaplotig	exon	20768420	20768460	100	-	.	Parent=FBgn0027453.1.mrna1;Target=FBgn0027453.1 1 41 +
ChrX	stalkie_big_nohaplotig	CDS	20764282	20764549	.	-	1	Parent=FBgn0027453.1.mrna1;Target=FBgn0027453.1 600 867 +
ChrX	stalkie_big_nohaplotig	CDS	20766144	20766578	.	-	1	Parent=FBgn0027453.1.mrna1;Target=FBgn0027453.1 165 599 +
ChrX	stalkie_big_nohaplotig	CDS	20766644	20766766	.	-	1	Parent=FBgn0027453.1.mrna1;Target=FBgn0027453.1 42 164 +
ChrX	stalkie_big_nohaplotig	CDS	20768420	20768460	.	-	0	Parent=FBgn0027453.1.mrna1;Target=FBgn0027453.1 1 41 +
ChrX	gffcl	locus	20770732	20770780	.	+	.	ID=RLOC_00001243;geneIDs=FBgn0027363.1.path1;transcripts=FBgn0027363.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20770732	20770780	.	+	.	ID=FBgn0027363.1.mrna1;geneID=FBgn0027363.1.path1;Name=FBgn0027363.1;Dir=indeterminatecoverage=2.8;identity=100.0;matches=49;mismatches=0;indels=0;unknowns=0;Target=FBgn0027363.1 49 1 .;locus=RLOC_00001243
ChrX	stalkie_big_nohaplotig	exon	20770732	20770780	100	+	.	Parent=FBgn0027363.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	20770732	20770780	.	+	0	Parent=FBgn0027363.1.mrna1
ChrX	gffcl	locus	20782144	20785816	.	-	.	ID=RLOC_00001244;geneIDs=FBgn0005670.1.path1;transcripts=FBgn0005670.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20782144	20785816	.	-	.	ID=FBgn0005670.1.mrna1;geneID=FBgn0005670.1.path1;Name=FBgn0005670.1;Dir=sensecoverage=100.0;identity=99.3;matches=1573;mismatches=11;indels=0;unknowns=0;locus=RLOC_00001244
ChrX	stalkie_big_nohaplotig	exon	20782144	20782490	99	-	.	Parent=FBgn0005670.1.mrna1;Target=FBgn0005670.1 1238 1584 +
ChrX	stalkie_big_nohaplotig	exon	20782551	20783116	99	-	.	Parent=FBgn0005670.1.mrna1;Target=FBgn0005670.1 672 1237 +
ChrX	stalkie_big_nohaplotig	exon	20784758	20784827	100	-	.	Parent=FBgn0005670.1.mrna1;Target=FBgn0005670.1 602 671 +
ChrX	stalkie_big_nohaplotig	exon	20785216	20785816	99	-	.	Parent=FBgn0005670.1.mrna1;Target=FBgn0005670.1 1 601 +
ChrX	stalkie_big_nohaplotig	CDS	20782144	20782490	.	-	2	Parent=FBgn0005670.1.mrna1;Target=FBgn0005670.1 1238 1584 +
ChrX	stalkie_big_nohaplotig	CDS	20782551	20783116	.	-	1	Parent=FBgn0005670.1.mrna1;Target=FBgn0005670.1 672 1237 +
ChrX	stalkie_big_nohaplotig	CDS	20784758	20784827	.	-	2	Parent=FBgn0005670.1.mrna1;Target=FBgn0005670.1 602 671 +
ChrX	stalkie_big_nohaplotig	CDS	20785216	20785816	.	-	0	Parent=FBgn0005670.1.mrna1;Target=FBgn0005670.1 1 601 +
ChrX	gffcl	locus	20791653	20791944	.	+	.	ID=RLOC_00001245;geneIDs=comp118841_c0_seq1.path1;transcripts=comp118841_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20791653	20791944	.	+	.	ID=comp118841_c0_seq1.mrna1;geneID=comp118841_c0_seq1.path1;Name=comp118841_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=292;mismatches=0;indels=0;unknowns=0;Target=comp118841_c0_seq1 292 1 .;CDS_Target=comp118841_c0_seq1 291 172 .;locus=RLOC_00001245
ChrX	stalkie_big_nohaplotig	exon	20791653	20791944	100	+	.	Parent=comp118841_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	20791824	20791943	.	+	0	Parent=comp118841_c0_seq1.mrna1
ChrX	gffcl	locus	20817561	20907010	.	+	.	ID=RLOC_00001247;geneIDs=comp157727_c0_seq1.path1;transcripts=comp157727_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20817561	20907010	.	+	.	ID=comp157727_c0_seq1.mrna1;geneID=comp157727_c0_seq1.path1;Name=comp157727_c0_seq1;Dir=antisensecoverage=98.3;identity=99.7;matches=742;mismatches=2;indels=0;unknowns=0;Target=comp157727_c0_seq1 133 674 .;locus=RLOC_00001247
ChrX	stalkie_big_nohaplotig	exon	20817561	20818178	99	+	.	Parent=comp157727_c0_seq1.mrna1;Target=comp157727_c0_seq1 133 750 -
ChrX	stalkie_big_nohaplotig	exon	20906885	20907010	100	+	.	Parent=comp157727_c0_seq1.mrna1;Target=comp157727_c0_seq1 7 132 -
ChrX	stalkie_big_nohaplotig	CDS	20817637	20818178	.	+	0	Parent=comp157727_c0_seq1.mrna1
ChrX	gffcl	locus	20821599	20822470	.	+	.	ID=RLOC_00001248;geneIDs=ORF2707.path2;transcripts=ORF2707.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	20821599	20822470	.	+	.	ID=ORF2707.mrna2;geneID=ORF2707.path2;Name=ORF2707;Dir=sensecoverage=100.0;identity=100.0;matches=819;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001248
ChrX	stalkie_big_nohaplotig	exon	20821599	20821850	100	+	.	Parent=ORF2707.mrna2;Target=ORF2707 1 252 +
ChrX	stalkie_big_nohaplotig	exon	20821904	20822470	100	+	.	Parent=ORF2707.mrna2;Target=ORF2707 253 819 +
ChrX	stalkie_big_nohaplotig	CDS	20821599	20821850	.	+	0	Parent=ORF2707.mrna2;Target=ORF2707 1 252 +
ChrX	stalkie_big_nohaplotig	CDS	20821904	20822470	.	+	0	Parent=ORF2707.mrna2;Target=ORF2707 253 819 +
ChrX	gffcl	locus	20868439	20868907	.	+	.	ID=RLOC_00001249;geneIDs=FBgn0025638.4.path1;transcripts=FBgn0025638.4.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20868439	20868907	.	+	.	ID=FBgn0025638.4.mrna1;geneID=FBgn0025638.4.path1;Name=FBgn0025638.4;Dir=sensecoverage=100.0;identity=99.4;matches=340;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001249
ChrX	stalkie_big_nohaplotig	exon	20868439	20868537	98	+	.	Parent=FBgn0025638.4.mrna1;Target=FBgn0025638.4 1 99 +
ChrX	stalkie_big_nohaplotig	exon	20868603	20868630	100	+	.	Parent=FBgn0025638.4.mrna1;Target=FBgn0025638.4 100 127 +
ChrX	stalkie_big_nohaplotig	exon	20868693	20868907	99	+	.	Parent=FBgn0025638.4.mrna1;Target=FBgn0025638.4 128 342 +
ChrX	stalkie_big_nohaplotig	CDS	20868439	20868537	.	+	0	Parent=FBgn0025638.4.mrna1;Target=FBgn0025638.4 1 99 +
ChrX	stalkie_big_nohaplotig	CDS	20868603	20868630	.	+	0	Parent=FBgn0025638.4.mrna1;Target=FBgn0025638.4 100 127 +
ChrX	stalkie_big_nohaplotig	CDS	20868693	20868907	.	+	2	Parent=FBgn0025638.4.mrna1;Target=FBgn0025638.4 128 342 +
ChrX	gffcl	locus	20905817	21637140	.	-	.	ID=RLOC_00001250;geneIDs=comp1653752_c0_seq1.path1;transcripts=comp1653752_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20905817	21637140	.	-	.	ID=comp1653752_c0_seq1.mrna1;geneID=comp1653752_c0_seq1.path1;Name=comp1653752_c0_seq1;Dir=indeterminatecoverage=62.7;identity=85.5;matches=112;mismatches=19;indels=0;unknowns=0;Target=comp1653752_c0_seq1 27 1 .;locus=RLOC_00001250
ChrX	stalkie_big_nohaplotig	exon	20905817	20905822	100	-	.	Parent=comp1653752_c0_seq1.mrna1;Target=comp1653752_c0_seq1 131 126 .
ChrX	stalkie_big_nohaplotig	exon	21637016	21637140	84	-	.	Parent=comp1653752_c0_seq1.mrna1;Target=comp1653752_c0_seq1 125 1 .
ChrX	stalkie_big_nohaplotig	CDS	21637114	21637140	.	-	0	Parent=comp1653752_c0_seq1.mrna1
ChrX	gffcl	locus	20929355	20930021	.	-	.	ID=RLOC_00001251;geneIDs=comp158532_c2_seq1.path2;transcripts=comp158532_c2_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	20929355	20930021	.	-	.	ID=comp158532_c2_seq1.mrna2;geneID=comp158532_c2_seq1.path2;Name=comp158532_c2_seq1;Dir=indeterminatecoverage=82.5;identity=98.8;matches=659;mismatches=8;indels=0;unknowns=0;Target=comp158532_c2_seq1 808 142 .;CDS_Target=comp158532_c2_seq1 498 205 .;locus=RLOC_00001251
ChrX	stalkie_big_nohaplotig	exon	20929355	20930021	98	-	.	Parent=comp158532_c2_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	20929665	20929958	.	-	0	Parent=comp158532_c2_seq1.mrna2
ChrX	gffcl	locus	20956046	20958738	.	+	.	ID=RLOC_00001252;geneIDs=FBgn0011573.2.path1;transcripts=FBgn0011573.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20956046	20958738	.	+	.	ID=FBgn0011573.2.mrna1;geneID=FBgn0011573.2.path1;Name=FBgn0011573.2;Dir=sensecoverage=100.0;identity=99.8;matches=2270;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001252
ChrX	stalkie_big_nohaplotig	exon	20956046	20956084	100	+	.	Parent=FBgn0011573.2.mrna1;Target=FBgn0011573.2 1 39 +
ChrX	stalkie_big_nohaplotig	exon	20956151	20956381	100	+	.	Parent=FBgn0011573.2.mrna1;Target=FBgn0011573.2 40 270 +
ChrX	stalkie_big_nohaplotig	exon	20956461	20957048	100	+	.	Parent=FBgn0011573.2.mrna1;Target=FBgn0011573.2 271 858 +
ChrX	stalkie_big_nohaplotig	exon	20957135	20957336	99	+	.	Parent=FBgn0011573.2.mrna1;Target=FBgn0011573.2 859 1060 +
ChrX	stalkie_big_nohaplotig	exon	20957404	20957721	99	+	.	Parent=FBgn0011573.2.mrna1;Target=FBgn0011573.2 1061 1378 +
ChrX	stalkie_big_nohaplotig	exon	20957783	20958592	99	+	.	Parent=FBgn0011573.2.mrna1;Target=FBgn0011573.2 1379 2188 +
ChrX	stalkie_big_nohaplotig	exon	20958653	20958738	100	+	.	Parent=FBgn0011573.2.mrna1;Target=FBgn0011573.2 2189 2274 +
ChrX	stalkie_big_nohaplotig	CDS	20956046	20956084	.	+	0	Parent=FBgn0011573.2.mrna1;Target=FBgn0011573.2 1 39 +
ChrX	stalkie_big_nohaplotig	CDS	20956151	20956381	.	+	0	Parent=FBgn0011573.2.mrna1;Target=FBgn0011573.2 40 270 +
ChrX	stalkie_big_nohaplotig	CDS	20956461	20957048	.	+	0	Parent=FBgn0011573.2.mrna1;Target=FBgn0011573.2 271 858 +
ChrX	stalkie_big_nohaplotig	CDS	20957135	20957336	.	+	0	Parent=FBgn0011573.2.mrna1;Target=FBgn0011573.2 859 1060 +
ChrX	stalkie_big_nohaplotig	CDS	20957404	20957721	.	+	2	Parent=FBgn0011573.2.mrna1;Target=FBgn0011573.2 1061 1378 +
ChrX	stalkie_big_nohaplotig	CDS	20957783	20958592	.	+	2	Parent=FBgn0011573.2.mrna1;Target=FBgn0011573.2 1379 2188 +
ChrX	stalkie_big_nohaplotig	CDS	20958653	20958738	.	+	2	Parent=FBgn0011573.2.mrna1;Target=FBgn0011573.2 2189 2274 +
ChrX	gffcl	locus	20972183	21267178	.	+	.	ID=RLOC_00001253;geneIDs=ORF1119.path1;transcripts=ORF1119.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20972183	21267178	.	+	.	ID=ORF1119.mrna1;geneID=ORF1119.path1;Name=ORF1119;Dir=sensecoverage=86.9;identity=98.3;matches=996;mismatches=17;indels=0;unknowns=0;locus=RLOC_00001253
ChrX	stalkie_big_nohaplotig	exon	20972183	20972825	98	+	.	Parent=ORF1119.mrna1;Target=ORF1119 43 685 +
ChrX	stalkie_big_nohaplotig	exon	20972886	20973008	98	+	.	Parent=ORF1119.mrna1;Target=ORF1119 686 808 +
ChrX	stalkie_big_nohaplotig	exon	20973081	20973312	97	+	.	Parent=ORF1119.mrna1;Target=ORF1119 809 1040 +
ChrX	stalkie_big_nohaplotig	exon	21259188	21259196	100	+	.	Parent=ORF1119.mrna1;Target=ORF1119 1042 1050 +
ChrX	stalkie_big_nohaplotig	exon	21259223	21259224	100	+	.	Parent=ORF1119.mrna1;Target=ORF1119 1104 1105 +
ChrX	stalkie_big_nohaplotig	exon	21267176	21267178	100	+	.	Parent=ORF1119.mrna1;Target=ORF1119 1106 1108 +
ChrX	stalkie_big_nohaplotig	CDS	20972183	20972825	.	+	0	Parent=ORF1119.mrna1;Target=ORF1119 43 685 +
ChrX	stalkie_big_nohaplotig	CDS	20972886	20973008	.	+	2	Parent=ORF1119.mrna1;Target=ORF1119 686 808 +
ChrX	stalkie_big_nohaplotig	CDS	20973081	20973312	.	+	2	Parent=ORF1119.mrna1;Target=ORF1119 809 1040 +
ChrX	stalkie_big_nohaplotig	CDS	21259188	21259196	.	+	1	Parent=ORF1119.mrna1;Target=ORF1119 1042 1050 +
ChrX	stalkie_big_nohaplotig	CDS	21259223	21259224	.	+	1	Parent=ORF1119.mrna1;Target=ORF1119 1104 1105 +
ChrX	stalkie_big_nohaplotig	CDS	21267176	21267177	.	+	2	Parent=ORF1119.mrna1;Target=ORF1119 1106 1107 +
ChrX	gffcl	locus	20975968	20976806	.	-	.	ID=RLOC_00001254;geneIDs=comp158420_c0_seq1.path1;transcripts=comp158420_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	20975968	20976806	.	-	.	ID=comp158420_c0_seq1.mrna1;geneID=comp158420_c0_seq1.path1;Name=comp158420_c0_seq1;Dir=sensecoverage=99.3;identity=97.0;matches=668;mismatches=21;indels=0;unknowns=0;Target=comp158420_c0_seq1 104 567 +;locus=RLOC_00001254
ChrX	stalkie_big_nohaplotig	exon	20975968	20976094	88	-	.	Parent=comp158420_c0_seq1.mrna1;Target=comp158420_c0_seq1 568 694 +
ChrX	stalkie_big_nohaplotig	exon	20976245	20976806	98	-	.	Parent=comp158420_c0_seq1.mrna1;Target=comp158420_c0_seq1 6 567 +
ChrX	stalkie_big_nohaplotig	CDS	20976245	20976708	.	-	0	Parent=comp158420_c0_seq1.mrna1
ChrX	gffcl	locus	21011516	21015367	.	-	.	ID=RLOC_00001255;geneIDs=comp161918_c0_seq1.path1;transcripts=comp161918_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21011516	21015367	.	-	.	ID=comp161918_c0_seq1.mrna1;geneID=comp161918_c0_seq1.path1;Name=comp161918_c0_seq1;Dir=antisensecoverage=100.0;identity=98.0;matches=1725;mismatches=20;indels=15;unknowns=0;locus=RLOC_00001255
ChrX	stalkie_big_nohaplotig	exon	21011516	21011898	97	-	.	Parent=comp161918_c0_seq1.mrna1;Target=comp161918_c0_seq1 1 383 -
ChrX	stalkie_big_nohaplotig	exon	21012913	21013653	97	-	.	Parent=comp161918_c0_seq1.mrna1;Target=comp161918_c0_seq1 384 1139 -
ChrX	stalkie_big_nohaplotig	exon	21014179	21014273	98	-	.	Parent=comp161918_c0_seq1.mrna1;Target=comp161918_c0_seq1 1140 1234 -
ChrX	stalkie_big_nohaplotig	exon	21014340	21014608	99	-	.	Parent=comp161918_c0_seq1.mrna1;Target=comp161918_c0_seq1 1235 1503 -
ChrX	stalkie_big_nohaplotig	exon	21015111	21015367	98	-	.	Parent=comp161918_c0_seq1.mrna1;Target=comp161918_c0_seq1 1504 1760 -
ChrX	stalkie_big_nohaplotig	CDS	21014378	21014608	.	-	0	Parent=comp161918_c0_seq1.mrna1;Target=comp161918_c0_seq1 1273 1503 .
ChrX	stalkie_big_nohaplotig	CDS	21015111	21015212	.	-	0	Parent=comp161918_c0_seq1.mrna1;Target=comp161918_c0_seq1 1504 1605 .
ChrX	gffcl	locus	21019257	21020668	.	-	.	ID=RLOC_00001256;geneIDs=ORF1196.path1;transcripts=ORF1196.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21019257	21020668	.	-	.	ID=ORF1196.mrna1;geneID=ORF1196.path1;Name=ORF1196;Dir=sensecoverage=100.0;identity=99.8;matches=1189;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001256
ChrX	stalkie_big_nohaplotig	exon	21019257	21019583	100	-	.	Parent=ORF1196.mrna1;Target=ORF1196 865 1191 +
ChrX	stalkie_big_nohaplotig	exon	21019647	21020249	99	-	.	Parent=ORF1196.mrna1;Target=ORF1196 262 864 +
ChrX	stalkie_big_nohaplotig	exon	21020322	21020516	100	-	.	Parent=ORF1196.mrna1;Target=ORF1196 67 261 +
ChrX	stalkie_big_nohaplotig	exon	21020603	21020668	100	-	.	Parent=ORF1196.mrna1;Target=ORF1196 1 66 +
ChrX	stalkie_big_nohaplotig	CDS	21019257	21019583	.	-	0	Parent=ORF1196.mrna1;Target=ORF1196 865 1191 +
ChrX	stalkie_big_nohaplotig	CDS	21019647	21020249	.	-	0	Parent=ORF1196.mrna1;Target=ORF1196 262 864 +
ChrX	stalkie_big_nohaplotig	CDS	21020322	21020516	.	-	0	Parent=ORF1196.mrna1;Target=ORF1196 67 261 +
ChrX	stalkie_big_nohaplotig	CDS	21020603	21020668	.	-	0	Parent=ORF1196.mrna1;Target=ORF1196 1 66 +
ChrX	gffcl	locus	21028774	21035710	.	+	.	ID=RLOC_00001257;geneIDs=comp157258_c0_seq1.path1;transcripts=comp157258_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21028774	21035710	.	+	.	ID=comp157258_c0_seq1.mrna1;geneID=comp157258_c0_seq1.path1;Name=comp157258_c0_seq1;Dir=antisensecoverage=99.0;identity=92.7;matches=838;mismatches=37;indels=29;unknowns=0;Target=comp157258_c0_seq1 728 832 .;locus=RLOC_00001257
ChrX	stalkie_big_nohaplotig	exon	21028774	21029524	92	+	.	Parent=comp157258_c0_seq1.mrna1;Target=comp157258_c0_seq1 125 904 -
ChrX	stalkie_big_nohaplotig	exon	21029572	21029677	95	+	.	Parent=comp157258_c0_seq1.mrna1;Target=comp157258_c0_seq1 19 124 -
ChrX	stalkie_big_nohaplotig	exon	21035693	21035710	100	+	.	Parent=comp157258_c0_seq1.mrna1;Target=comp157258_c0_seq1 1 18 -
ChrX	stalkie_big_nohaplotig	CDS	21028846	21028950	.	+	0	Parent=comp157258_c0_seq1.mrna1
ChrX	gffcl	locus	21040429	21041382	.	-	.	ID=RLOC_00001258;geneIDs=comp159099_c0_seq1.path1;transcripts=comp159099_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21040429	21041382	.	-	.	ID=comp159099_c0_seq1.mrna1;geneID=comp159099_c0_seq1.path1;Name=comp159099_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.7;matches=952;mismatches=2;indels=1;unknowns=0;Target=comp159099_c0_seq1 960 6 .;CDS_Target=comp159099_c0_seq1 238 155 .;locus=RLOC_00001258
ChrX	stalkie_big_nohaplotig	exon	21040429	21041382	99	-	.	Parent=comp159099_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21041150	21041233	.	-	0	Parent=comp159099_c0_seq1.mrna1
ChrX	gffcl	locus	21058430	21059888	.	+	.	ID=RLOC_00001259;geneIDs=ORF1151.path1;transcripts=ORF1151.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21058430	21059888	.	+	.	ID=ORF1151.mrna1;geneID=ORF1151.path1;Name=ORF1151;Dir=sensecoverage=100.0;identity=97.9;matches=1186;mismatches=8;indels=18;unknowns=0;locus=RLOC_00001259
ChrX	stalkie_big_nohaplotig	exon	21058430	21058468	100	+	.	Parent=ORF1151.mrna1;Target=ORF1151 1 39 +
ChrX	stalkie_big_nohaplotig	exon	21058564	21058752	91	+	.	Parent=ORF1151.mrna1;Target=ORF1151 40 246 +
ChrX	stalkie_big_nohaplotig	exon	21058820	21059371	99	+	.	Parent=ORF1151.mrna1;Target=ORF1151 247 798 +
ChrX	stalkie_big_nohaplotig	exon	21059475	21059888	99	+	.	Parent=ORF1151.mrna1;Target=ORF1151 799 1212 +
ChrX	stalkie_big_nohaplotig	CDS	21058430	21058468	.	+	0	Parent=ORF1151.mrna1;Target=ORF1151 1 39 +
ChrX	stalkie_big_nohaplotig	CDS	21058564	21058752	.	+	0	Parent=ORF1151.mrna1;Target=ORF1151 40 246 +
ChrX	stalkie_big_nohaplotig	CDS	21058820	21059371	.	+	0	Parent=ORF1151.mrna1;Target=ORF1151 247 798 +
ChrX	stalkie_big_nohaplotig	CDS	21059475	21059888	.	+	0	Parent=ORF1151.mrna1;Target=ORF1151 799 1212 +
ChrX	gffcl	locus	21072850	21073523	.	-	.	ID=RLOC_00001260;geneIDs=comp57033_c0_seq1.path1;transcripts=comp57033_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21072850	21073523	.	-	.	ID=comp57033_c0_seq1.mrna1;geneID=comp57033_c0_seq1.path1;Name=comp57033_c0_seq1;Dir=antisensecoverage=97.9;identity=100.0;matches=616;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001260
ChrX	stalkie_big_nohaplotig	exon	21072850	21073238	100	-	.	Parent=comp57033_c0_seq1.mrna1;Target=comp57033_c0_seq1 1 389 -
ChrX	stalkie_big_nohaplotig	exon	21073297	21073523	100	-	.	Parent=comp57033_c0_seq1.mrna1;Target=comp57033_c0_seq1 390 616 -
ChrX	stalkie_big_nohaplotig	CDS	21073051	21073238	.	-	2	Parent=comp57033_c0_seq1.mrna1;Target=comp57033_c0_seq1 202 389 .
ChrX	stalkie_big_nohaplotig	CDS	21073297	21073423	.	-	0	Parent=comp57033_c0_seq1.mrna1;Target=comp57033_c0_seq1 390 516 .
ChrX	gffcl	locus	21078837	21080052	.	-	.	ID=RLOC_00001261;geneIDs=ORF2523.path1;transcripts=ORF2523.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21078837	21080052	.	-	.	ID=ORF2523.mrna1;geneID=ORF2523.path1;Name=ORF2523;Dir=sensecoverage=100.0;identity=99.9;matches=845;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001261
ChrX	stalkie_big_nohaplotig	exon	21078837	21078908	100	-	.	Parent=ORF2523.mrna1;Target=ORF2523 775 846 +
ChrX	stalkie_big_nohaplotig	exon	21079154	21079738	99	-	.	Parent=ORF2523.mrna1;Target=ORF2523 190 774 +
ChrX	stalkie_big_nohaplotig	exon	21079798	21079923	100	-	.	Parent=ORF2523.mrna1;Target=ORF2523 64 189 +
ChrX	stalkie_big_nohaplotig	exon	21079990	21080052	100	-	.	Parent=ORF2523.mrna1;Target=ORF2523 1 63 +
ChrX	stalkie_big_nohaplotig	CDS	21078837	21078908	.	-	0	Parent=ORF2523.mrna1;Target=ORF2523 775 846 +
ChrX	stalkie_big_nohaplotig	CDS	21079154	21079738	.	-	0	Parent=ORF2523.mrna1;Target=ORF2523 190 774 +
ChrX	stalkie_big_nohaplotig	CDS	21079798	21079923	.	-	0	Parent=ORF2523.mrna1;Target=ORF2523 64 189 +
ChrX	stalkie_big_nohaplotig	CDS	21079990	21080052	.	-	0	Parent=ORF2523.mrna1;Target=ORF2523 1 63 +
ChrX	gffcl	locus	21130039	21130992	.	+	.	ID=RLOC_00001262;geneIDs=comp159099_c0_seq1.path2;transcripts=comp159099_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	21130039	21130992	.	+	.	ID=comp159099_c0_seq1.mrna2;geneID=comp159099_c0_seq1.path2;Name=comp159099_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.7;matches=952;mismatches=2;indels=1;unknowns=0;Target=comp159099_c0_seq1 960 6 .;CDS_Target=comp159099_c0_seq1 238 155 .;locus=RLOC_00001262
ChrX	stalkie_big_nohaplotig	exon	21130039	21130992	99	+	.	Parent=comp159099_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	21130188	21130271	.	+	0	Parent=comp159099_c0_seq1.mrna2
ChrX	gffcl	locus	21157016	21158034	.	+	.	ID=RLOC_00001263;geneIDs=comp161381_c0_seq1.path1;transcripts=comp161381_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21157016	21158034	.	+	.	ID=comp161381_c0_seq1.mrna1;geneID=comp161381_c0_seq1.path1;Name=comp161381_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.3;matches=1012;mismatches=7;indels=0;unknowns=0;Target=comp161381_c0_seq1 1031 13 .;CDS_Target=comp161381_c0_seq1 421 293 .;locus=RLOC_00001263
ChrX	stalkie_big_nohaplotig	exon	21157016	21158034	99	+	.	Parent=comp161381_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21157296	21157424	.	+	0	Parent=comp161381_c0_seq1.mrna1
ChrX	gffcl	locus	21175055	21176077	.	-	.	ID=RLOC_00001264;geneIDs=ORF1695.path1;transcripts=ORF1695.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21175055	21176077	.	-	.	ID=ORF1695.mrna1;geneID=ORF1695.path1;Name=ORF1695;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1021;mismatches=2;indels=0;unknowns=0;Target=ORF1695 1023 1 .;locus=RLOC_00001264
ChrX	stalkie_big_nohaplotig	exon	21175055	21176077	99	-	.	Parent=ORF1695.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21175055	21176077	.	-	0	Parent=ORF1695.mrna1
ChrX	gffcl	locus	21206936	21207214	.	+	.	ID=RLOC_00001265;geneIDs=comp149793_c0_seq1.path1;transcripts=comp149793_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21206936	21207214	.	+	.	ID=comp149793_c0_seq1.mrna1;geneID=comp149793_c0_seq1.path1;Name=comp149793_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.1;matches=269;mismatches=10;indels=4;unknowns=0;Target=comp149793_c0_seq1 283 1 .;CDS_Target=comp149793_c0_seq1 200 3 .;locus=RLOC_00001265
ChrX	stalkie_big_nohaplotig	exon	21206936	21207214	95	+	.	Parent=comp149793_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21206938	21207135	.	+	0	Parent=comp149793_c0_seq1.mrna1
ChrX	gffcl	locus	21207489	21212109	.	+	.	ID=RLOC_00001266;geneIDs=FBgn0036816.1.path1;transcripts=FBgn0036816.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21207489	21212109	.	+	.	ID=FBgn0036816.1.mrna1;geneID=FBgn0036816.1.path1;Name=FBgn0036816.1;Dir=sensecoverage=100.0;identity=99.9;matches=1676;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001266
ChrX	stalkie_big_nohaplotig	exon	21207489	21207659	100	+	.	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 1 171 +
ChrX	stalkie_big_nohaplotig	exon	21208312	21208428	99	+	.	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 172 288 +
ChrX	stalkie_big_nohaplotig	exon	21208483	21208631	100	+	.	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 289 437 +
ChrX	stalkie_big_nohaplotig	exon	21208716	21208830	100	+	.	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 438 552 +
ChrX	stalkie_big_nohaplotig	exon	21208915	21208964	100	+	.	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 553 602 +
ChrX	stalkie_big_nohaplotig	exon	21209038	21209163	100	+	.	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 603 728 +
ChrX	stalkie_big_nohaplotig	exon	21209229	21209540	100	+	.	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 729 1040 +
ChrX	stalkie_big_nohaplotig	exon	21209597	21209691	100	+	.	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 1041 1135 +
ChrX	stalkie_big_nohaplotig	exon	21209755	21209841	100	+	.	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 1136 1222 +
ChrX	stalkie_big_nohaplotig	exon	21211064	21211257	100	+	.	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 1223 1416 +
ChrX	stalkie_big_nohaplotig	exon	21211789	21211926	100	+	.	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 1417 1554 +
ChrX	stalkie_big_nohaplotig	exon	21211987	21212109	100	+	.	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 1555 1677 +
ChrX	stalkie_big_nohaplotig	CDS	21207489	21207659	.	+	0	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 1 171 +
ChrX	stalkie_big_nohaplotig	CDS	21208312	21208428	.	+	0	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 172 288 +
ChrX	stalkie_big_nohaplotig	CDS	21208483	21208631	.	+	0	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 289 437 +
ChrX	stalkie_big_nohaplotig	CDS	21208716	21208830	.	+	1	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 438 552 +
ChrX	stalkie_big_nohaplotig	CDS	21208915	21208964	.	+	0	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 553 602 +
ChrX	stalkie_big_nohaplotig	CDS	21209038	21209163	.	+	1	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 603 728 +
ChrX	stalkie_big_nohaplotig	CDS	21209229	21209540	.	+	1	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 729 1040 +
ChrX	stalkie_big_nohaplotig	CDS	21209597	21209691	.	+	1	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 1041 1135 +
ChrX	stalkie_big_nohaplotig	CDS	21209755	21209841	.	+	2	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 1136 1222 +
ChrX	stalkie_big_nohaplotig	CDS	21211064	21211257	.	+	2	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 1223 1416 +
ChrX	stalkie_big_nohaplotig	CDS	21211789	21211926	.	+	0	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 1417 1554 +
ChrX	stalkie_big_nohaplotig	CDS	21211987	21212109	.	+	0	Parent=FBgn0036816.1.mrna1;Target=FBgn0036816.1 1555 1677 +
ChrX	gffcl	locus	21214944	21216458	.	+	.	ID=RLOC_00001267;geneIDs=ORF2556.path1,comp145752_c0_seq1.path1;transcripts=ORF2556.mrna1,comp145752_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21214944	21216458	.	+	.	ID=ORF2556.mrna1;geneID=ORF2556.path1;Name=ORF2556;Dir=sensecoverage=100.0;identity=99.5;matches=839;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001267
ChrX	stalkie_big_nohaplotig	exon	21214944	21215070	100	+	.	Parent=ORF2556.mrna1;Target=ORF2556 1 127 +
ChrX	stalkie_big_nohaplotig	exon	21215743	21216458	99	+	.	Parent=ORF2556.mrna1;Target=ORF2556 128 843 +
ChrX	stalkie_big_nohaplotig	CDS	21214944	21215070	.	+	0	Parent=ORF2556.mrna1;Target=ORF2556 1 127 +
ChrX	stalkie_big_nohaplotig	CDS	21215743	21216458	.	+	2	Parent=ORF2556.mrna1;Target=ORF2556 128 843 +
ChrX	stalkie_big_nohaplotig	mRNA	21215047	21215765	.	+	.	ID=comp145752_c0_seq1.mrna1;geneID=comp145752_c0_seq1.path1;Name=comp145752_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=719;mismatches=0;indels=0;unknowns=0;Target=comp145752_c0_seq1 719 1 .;CDS_Target=comp145752_c0_seq1 107 3 .;locus=RLOC_00001267
ChrX	stalkie_big_nohaplotig	exon	21215047	21215765	100	+	.	Parent=comp145752_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21215049	21215153	.	+	0	Parent=comp145752_c0_seq1.mrna1
ChrX	gffcl	locus	21244418	22382760	.	+	.	ID=RLOC_00001268;geneIDs=comp163232_c0_seq1.path1;transcripts=comp163232_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21244418	22382760	.	+	.	ID=comp163232_c0_seq1.mrna1;geneID=comp163232_c0_seq1.path1;Name=comp163232_c0_seq1;Dir=antisensecoverage=79.4;identity=96.2;matches=1871;mismatches=23;indels=50;unknowns=0;locus=RLOC_00001268
ChrX	stalkie_big_nohaplotig	exon	21244418	21244425	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 2146 2153 -
ChrX	stalkie_big_nohaplotig	exon	21325665	21325677	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 2130 2142 -
ChrX	stalkie_big_nohaplotig	exon	21341332	21341334	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 2127 2129 -
ChrX	stalkie_big_nohaplotig	exon	21347527	21347537	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 2024 2034 -
ChrX	stalkie_big_nohaplotig	exon	21348149	21348156	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 2016 2023 -
ChrX	stalkie_big_nohaplotig	exon	21349088	21349095	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 2008 2015 -
ChrX	stalkie_big_nohaplotig	exon	21349784	21349793	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1998 2007 -
ChrX	stalkie_big_nohaplotig	exon	21355718	21355721	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1994 1997 -
ChrX	stalkie_big_nohaplotig	exon	21358060	21358067	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1972 1979 -
ChrX	stalkie_big_nohaplotig	exon	21358120	21358127	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1905 1912 -
ChrX	stalkie_big_nohaplotig	exon	21361473	21361524	9	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1900 1904 -
ChrX	stalkie_big_nohaplotig	exon	21367821	21367830	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1890 1899 -
ChrX	stalkie_big_nohaplotig	exon	21378099	21378103	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1885 1889 -
ChrX	stalkie_big_nohaplotig	exon	21379038	21379041	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1881 1884 -
ChrX	stalkie_big_nohaplotig	exon	21379050	21379060	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1823 1833 -
ChrX	stalkie_big_nohaplotig	exon	21382750	21382758	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1794 1802 -
ChrX	stalkie_big_nohaplotig	exon	21383699	21383705	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1787 1793 -
ChrX	stalkie_big_nohaplotig	exon	21388248	21388250	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1784 1786 -
ChrX	stalkie_big_nohaplotig	exon	21389793	21389796	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1780 1783 -
ChrX	stalkie_big_nohaplotig	exon	21393512	21393516	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1775 1779 -
ChrX	stalkie_big_nohaplotig	exon	21397914	21397926	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1761 1773 -
ChrX	stalkie_big_nohaplotig	exon	21405132	21405137	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1755 1760 -
ChrX	stalkie_big_nohaplotig	exon	21408223	21408225	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1752 1754 -
ChrX	stalkie_big_nohaplotig	exon	21408377	21408379	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1749 1751 -
ChrX	stalkie_big_nohaplotig	exon	21419479	21419483	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1744 1748 -
ChrX	stalkie_big_nohaplotig	exon	21420939	21420949	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1727 1737 -
ChrX	stalkie_big_nohaplotig	exon	21492564	21492574	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1713 1723 -
ChrX	stalkie_big_nohaplotig	exon	21496994	21497000	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1706 1712 -
ChrX	stalkie_big_nohaplotig	exon	21497816	21497824	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1697 1705 -
ChrX	stalkie_big_nohaplotig	exon	21503901	21503903	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1694 1696 -
ChrX	stalkie_big_nohaplotig	exon	21508029	21508035	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1687 1693 -
ChrX	stalkie_big_nohaplotig	exon	21513221	21513223	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1684 1686 -
ChrX	stalkie_big_nohaplotig	exon	21527298	21527304	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1677 1683 -
ChrX	stalkie_big_nohaplotig	exon	21537236	21537243	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1669 1676 -
ChrX	stalkie_big_nohaplotig	exon	21539192	21539196	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1664 1668 -
ChrX	stalkie_big_nohaplotig	exon	22379588	22379766	96	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1485 1663 -
ChrX	stalkie_big_nohaplotig	exon	22380558	22381170	99	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 872 1484 -
ChrX	stalkie_big_nohaplotig	exon	22381236	22381662	98	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 448 871 -
ChrX	stalkie_big_nohaplotig	exon	22381711	22381775	100	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 383 447 -
ChrX	stalkie_big_nohaplotig	exon	22382339	22382489	96	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 232 382 -
ChrX	stalkie_big_nohaplotig	exon	22382546	22382760	98	+	.	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 17 231 -
ChrX	stalkie_big_nohaplotig	CDS	22379674	22379766	.	+	0	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1485 1577 .
ChrX	stalkie_big_nohaplotig	CDS	22380558	22380683	.	+	0	Parent=comp163232_c0_seq1.mrna1;Target=comp163232_c0_seq1 1359 1484 .
ChrX	gffcl	locus	21248103	21249260	.	-	.	ID=RLOC_00001269;geneIDs=comp151332_c0_seq1.path1;transcripts=comp151332_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21248103	21249260	.	-	.	ID=comp151332_c0_seq1.mrna1;geneID=comp151332_c0_seq1.path1;Name=comp151332_c0_seq1;Dir=sensecoverage=97.5;identity=99.3;matches=551;mismatches=2;indels=2;unknowns=0;locus=RLOC_00001269
ChrX	stalkie_big_nohaplotig	exon	21248103	21248120	100	-	.	Parent=comp151332_c0_seq1.mrna1;Target=comp151332_c0_seq1 552 569 +
ChrX	stalkie_big_nohaplotig	exon	21248187	21248504	99	-	.	Parent=comp151332_c0_seq1.mrna1;Target=comp151332_c0_seq1 233 551 +
ChrX	stalkie_big_nohaplotig	exon	21249044	21249260	99	-	.	Parent=comp151332_c0_seq1.mrna1;Target=comp151332_c0_seq1 15 232 +
ChrX	stalkie_big_nohaplotig	CDS	21248334	21248504	.	-	0	Parent=comp151332_c0_seq1.mrna1;Target=comp151332_c0_seq1 233 403 +
ChrX	stalkie_big_nohaplotig	CDS	21249044	21249154	.	-	0	Parent=comp151332_c0_seq1.mrna1;Target=comp151332_c0_seq1 122 232 +
ChrX	gffcl	locus	21268502	21269557	.	-	.	ID=RLOC_00001270;geneIDs=ORF2948.path1,comp160042_c0_seq1.path1;transcripts=ORF2948.mrna1,comp160042_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21268502	21269380	.	-	.	ID=ORF2948.mrna1;geneID=ORF2948.path1;Name=ORF2948;Dir=sensecoverage=100.0;identity=97.5;matches=766;mismatches=20;indels=0;unknowns=0;locus=RLOC_00001270
ChrX	stalkie_big_nohaplotig	exon	21268502	21268944	99	-	.	Parent=ORF2948.mrna1;Target=ORF2948 344 786 +
ChrX	stalkie_big_nohaplotig	exon	21269038	21269380	94	-	.	Parent=ORF2948.mrna1;Target=ORF2948 1 343 +
ChrX	stalkie_big_nohaplotig	CDS	21268502	21268944	.	-	2	Parent=ORF2948.mrna1;Target=ORF2948 344 786 +
ChrX	stalkie_big_nohaplotig	CDS	21269038	21269380	.	-	0	Parent=ORF2948.mrna1;Target=ORF2948 1 343 +
ChrX	stalkie_big_nohaplotig	mRNA	21268502	21269557	.	-	.	ID=comp160042_c0_seq1.mrna1;geneID=comp160042_c0_seq1.path1;Name=comp160042_c0_seq1;Dir=antisensecoverage=99.7;identity=98.2;matches=772;mismatches=14;indels=0;unknowns=0;locus=RLOC_00001270
ChrX	stalkie_big_nohaplotig	exon	21268502	21268944	99	-	.	Parent=comp160042_c0_seq1.mrna1;Target=comp160042_c0_seq1 1 443 -
ChrX	stalkie_big_nohaplotig	exon	21269038	21269285	98	-	.	Parent=comp160042_c0_seq1.mrna1;Target=comp160042_c0_seq1 444 691 -
ChrX	stalkie_big_nohaplotig	exon	21269463	21269557	91	-	.	Parent=comp160042_c0_seq1.mrna1;Target=comp160042_c0_seq1 692 786 -
ChrX	stalkie_big_nohaplotig	CDS	21268502	21268944	.	-	2	Parent=comp160042_c0_seq1.mrna1;Target=comp160042_c0_seq1 1 443 .
ChrX	stalkie_big_nohaplotig	CDS	21269038	21269285	.	-	1	Parent=comp160042_c0_seq1.mrna1;Target=comp160042_c0_seq1 444 691 .
ChrX	stalkie_big_nohaplotig	CDS	21269463	21269557	.	-	0	Parent=comp160042_c0_seq1.mrna1;Target=comp160042_c0_seq1 692 786 .
ChrX	gffcl	locus	21276759	21277457	.	-	.	ID=RLOC_00001271;geneIDs=comp146382_c2_seq1.path1;transcripts=comp146382_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21276759	21277457	.	-	.	ID=comp146382_c2_seq1.mrna1;geneID=comp146382_c2_seq1.path1;Name=comp146382_c2_seq1;Dir=indeterminatecoverage=98.2;identity=98.7;matches=690;mismatches=9;indels=0;unknowns=0;Target=comp146382_c2_seq1 712 14 .;CDS_Target=comp146382_c2_seq1 346 239 .;locus=RLOC_00001271
ChrX	stalkie_big_nohaplotig	exon	21276759	21277457	98	-	.	Parent=comp146382_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21277125	21277232	.	-	0	Parent=comp146382_c2_seq1.mrna1
ChrX	gffcl	locus	21308572	21325474	.	+	.	ID=RLOC_00001272;geneIDs=comp152291_c0_seq1.path1;transcripts=comp152291_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21308572	21325474	.	+	.	ID=comp152291_c0_seq1.mrna1;geneID=comp152291_c0_seq1.path1;Name=comp152291_c0_seq1;Dir=antisensecoverage=100.0;identity=98.8;matches=970;mismatches=12;indels=0;unknowns=0;Target=comp152291_c0_seq1 291 347 .;locus=RLOC_00001272
ChrX	stalkie_big_nohaplotig	exon	21308572	21309003	98	+	.	Parent=comp152291_c0_seq1.mrna1;Target=comp152291_c0_seq1 551 982 -
ChrX	stalkie_big_nohaplotig	exon	21310187	21310247	95	+	.	Parent=comp152291_c0_seq1.mrna1;Target=comp152291_c0_seq1 490 550 -
ChrX	stalkie_big_nohaplotig	exon	21324986	21325474	99	+	.	Parent=comp152291_c0_seq1.mrna1;Target=comp152291_c0_seq1 1 489 -
ChrX	stalkie_big_nohaplotig	CDS	21325128	21325184	.	+	0	Parent=comp152291_c0_seq1.mrna1
ChrX	gffcl	locus	21317829	21318710	.	+	.	ID=RLOC_00001273;geneIDs=ORF2284.path1;transcripts=ORF2284.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21317829	21318710	.	+	.	ID=ORF2284.mrna1;geneID=ORF2284.path1;Name=ORF2284;Dir=indeterminatecoverage=100.0;identity=99.8;matches=880;mismatches=2;indels=0;unknowns=0;Target=ORF2284 882 1 .;locus=RLOC_00001273
ChrX	stalkie_big_nohaplotig	exon	21317829	21318710	99	+	.	Parent=ORF2284.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21317829	21318710	.	+	0	Parent=ORF2284.mrna1
ChrX	gffcl	locus	21326185	21326835	.	+	.	ID=RLOC_00001274;geneIDs=comp147264_c1_seq1.path1;transcripts=comp147264_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21326185	21326835	.	+	.	ID=comp147264_c1_seq1.mrna1;geneID=comp147264_c1_seq1.path1;Name=comp147264_c1_seq1;Dir=indeterminatecoverage=99.5;identity=99.2;matches=646;mismatches=5;indels=0;unknowns=0;Target=comp147264_c1_seq1 654 4 .;locus=RLOC_00001274
ChrX	stalkie_big_nohaplotig	exon	21326185	21326835	99	+	.	Parent=comp147264_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21326185	21326835	.	+	0	Parent=comp147264_c1_seq1.mrna1
ChrX	gffcl	locus	21372610	21373307	.	-	.	ID=RLOC_00001275;geneIDs=comp149502_c0_seq1.path1;transcripts=comp149502_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21372610	21373307	.	-	.	ID=comp149502_c0_seq1.mrna1;geneID=comp149502_c0_seq1.path1;Name=comp149502_c0_seq1;Dir=sensecoverage=99.8;identity=97.7;matches=625;mismatches=13;indels=2;unknowns=0;Target=comp149502_c0_seq1 74 313 +;locus=RLOC_00001275
ChrX	stalkie_big_nohaplotig	exon	21372610	21372869	98	-	.	Parent=comp149502_c0_seq1.mrna1;Target=comp149502_c0_seq1 382 641 +
ChrX	stalkie_big_nohaplotig	exon	21372930	21373307	97	-	.	Parent=comp149502_c0_seq1.mrna1;Target=comp149502_c0_seq1 2 381 +
ChrX	stalkie_big_nohaplotig	CDS	21372998	21373237	.	-	0	Parent=comp149502_c0_seq1.mrna1
ChrX	gffcl	locus	21412410	21762556	.	.	.	ID=RLOC_00001277;geneIDs=comp140966_c1_seq1.path3,comp149455_c0_seq1.path1;transcripts=comp140966_c1_seq1.mrna3,comp149455_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21412410	21762556	.	-	.	ID=comp140966_c1_seq1.mrna3;geneID=comp140966_c1_seq1.path3;Name=comp140966_c1_seq1;Dir=indeterminatecoverage=19.1;identity=90.4;matches=94;mismatches=10;indels=0;unknowns=0;locus=RLOC_00001277
ChrX	stalkie_big_nohaplotig	exon	21412410	21412479	85	-	.	Parent=comp140966_c1_seq1.mrna3;Target=comp140966_c1_seq1 517 448 .
ChrX	stalkie_big_nohaplotig	exon	21754997	21755009	100	-	.	Parent=comp140966_c1_seq1.mrna3;Target=comp140966_c1_seq1 445 433 .
ChrX	stalkie_big_nohaplotig	exon	21757865	21757872	100	-	.	Parent=comp140966_c1_seq1.mrna3;Target=comp140966_c1_seq1 432 425 .
ChrX	stalkie_big_nohaplotig	exon	21760576	21760579	100	-	.	Parent=comp140966_c1_seq1.mrna3;Target=comp140966_c1_seq1 424 421 .
ChrX	stalkie_big_nohaplotig	exon	21762548	21762556	100	-	.	Parent=comp140966_c1_seq1.mrna3;Target=comp140966_c1_seq1 420 412 .
ChrX	stalkie_big_nohaplotig	CDS	21412464	21412479	.	-	0	Parent=comp140966_c1_seq1.mrna3;Target=comp140966_c1_seq1 463 448 .
ChrX	stalkie_big_nohaplotig	CDS	21754997	21755009	.	-	1	Parent=comp140966_c1_seq1.mrna3;Target=comp140966_c1_seq1 445 433 .
ChrX	stalkie_big_nohaplotig	CDS	21757865	21757872	.	-	0	Parent=comp140966_c1_seq1.mrna3;Target=comp140966_c1_seq1 432 425 .
ChrX	stalkie_big_nohaplotig	CDS	21760576	21760579	.	-	1	Parent=comp140966_c1_seq1.mrna3;Target=comp140966_c1_seq1 424 421 .
ChrX	stalkie_big_nohaplotig	CDS	21762548	21762555	.	-	0	Parent=comp140966_c1_seq1.mrna3;Target=comp140966_c1_seq1 420 413 .
ChrX	stalkie_big_nohaplotig	mRNA	21760573	21761608	.	+	.	ID=comp149455_c0_seq1.mrna1;geneID=comp149455_c0_seq1.path1;Name=comp149455_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1031;mismatches=5;indels=0;unknowns=0;Target=comp149455_c0_seq1 1036 1 .;CDS_Target=comp149455_c0_seq1 86 3 .;locus=RLOC_00001277
ChrX	stalkie_big_nohaplotig	exon	21760573	21761608	99	+	.	Parent=comp149455_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21760575	21760658	.	+	0	Parent=comp149455_c0_seq1.mrna1
ChrX	gffcl	locus	21413996	21414963	.	+	.	ID=RLOC_00001278;geneIDs=ORF1842.path1;transcripts=ORF1842.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21413996	21414963	.	+	.	ID=ORF1842.mrna1;geneID=ORF1842.path1;Name=ORF1842;Dir=indeterminatecoverage=98.4;identity=99.1;matches=959;mismatches=9;indels=0;unknowns=0;Target=ORF1842 983 16 .;CDS_Target=ORF1842 981 16 .;locus=RLOC_00001278
ChrX	stalkie_big_nohaplotig	exon	21413996	21414963	99	+	.	Parent=ORF1842.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21413996	21414961	.	+	0	Parent=ORF1842.mrna1
ChrX	gffcl	locus	21423871	21455752	.	+	.	ID=RLOC_00001279;geneIDs=FBgn0053516.1.path1,comp56717_c0_seq1.path1,comp154300_c0_seq1.path1;transcripts=FBgn0053516.1.mrna1,comp56717_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21423871	21455041	.	+	.	ID=FBgn0053516.1.mrna1;geneID=FBgn0053516.1.path1;Name=FBgn0053516.1;Dir=sensecoverage=100.0;identity=99.9;matches=1480;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001279
ChrX	stalkie_big_nohaplotig	exon	21423871	21424218	100	+	.	Parent=FBgn0053516.1.mrna1;Target=FBgn0053516.1 1 348 +
ChrX	stalkie_big_nohaplotig	exon	21430705	21430782	100	+	.	Parent=FBgn0053516.1.mrna1;Target=FBgn0053516.1 349 426 +
ChrX	stalkie_big_nohaplotig	exon	21431236	21431368	100	+	.	Parent=FBgn0053516.1.mrna1;Target=FBgn0053516.1 427 559 +
ChrX	stalkie_big_nohaplotig	exon	21446186	21446588	99	+	.	Parent=FBgn0053516.1.mrna1;Target=FBgn0053516.1 560 962 +
ChrX	stalkie_big_nohaplotig	exon	21447019	21447116	100	+	.	Parent=FBgn0053516.1.mrna1;Target=FBgn0053516.1 963 1060 +
ChrX	stalkie_big_nohaplotig	exon	21454620	21455041	99	+	.	Parent=FBgn0053516.1.mrna1;Target=FBgn0053516.1 1061 1482 +
ChrX	stalkie_big_nohaplotig	CDS	21423871	21424218	.	+	0	Parent=FBgn0053516.1.mrna1;Target=FBgn0053516.1 1 348 +
ChrX	stalkie_big_nohaplotig	CDS	21430705	21430782	.	+	0	Parent=FBgn0053516.1.mrna1;Target=FBgn0053516.1 349 426 +
ChrX	stalkie_big_nohaplotig	CDS	21431236	21431368	.	+	0	Parent=FBgn0053516.1.mrna1;Target=FBgn0053516.1 427 559 +
ChrX	stalkie_big_nohaplotig	CDS	21446186	21446588	.	+	2	Parent=FBgn0053516.1.mrna1;Target=FBgn0053516.1 560 962 +
ChrX	stalkie_big_nohaplotig	CDS	21447019	21447116	.	+	1	Parent=FBgn0053516.1.mrna1;Target=FBgn0053516.1 963 1060 +
ChrX	stalkie_big_nohaplotig	CDS	21454620	21455041	.	+	2	Parent=FBgn0053516.1.mrna1;Target=FBgn0053516.1 1061 1482 +
ChrX	stalkie_big_nohaplotig	mRNA	21455205	21455752	.	+	.	ID=comp56717_c0_seq1.mrna1;geneID=comp56717_c0_seq1.path1;Name=comp56717_c0_seq1;Dir=indeterminatecoverage=98.9;identity=98.5;matches=540;mismatches=6;indels=2;unknowns=0;Target=comp56717_c0_seq1 546 1 .;CDS_Target=comp56717_c0_seq1 431 312 .;locus=RLOC_00001279
ChrX	stalkie_big_nohaplotig	exon	21455205	21455752	98	+	.	Parent=comp56717_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21455518	21455637	.	+	0	Parent=comp56717_c0_seq1.mrna1
ChrX	gffcl	locus	21425795	21428900	.	-	.	ID=RLOC_00001280;geneIDs=comp159682_c0_seq1.path1;transcripts=comp159682_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21425795	21428900	.	-	.	ID=comp159682_c0_seq1.mrna1;geneID=comp159682_c0_seq1.path1;Name=comp159682_c0_seq1;Dir=antisensecoverage=99.7;identity=99.7;matches=1857;mismatches=5;indels=0;unknowns=0;locus=RLOC_00001280
ChrX	stalkie_big_nohaplotig	exon	21425795	21426817	99	-	.	Parent=comp159682_c0_seq1.mrna1;Target=comp159682_c0_seq1 2 1024 -
ChrX	stalkie_big_nohaplotig	exon	21426884	21426935	100	-	.	Parent=comp159682_c0_seq1.mrna1;Target=comp159682_c0_seq1 1025 1076 -
ChrX	stalkie_big_nohaplotig	exon	21427603	21427662	100	-	.	Parent=comp159682_c0_seq1.mrna1;Target=comp159682_c0_seq1 1077 1136 -
ChrX	stalkie_big_nohaplotig	exon	21427735	21428214	99	-	.	Parent=comp159682_c0_seq1.mrna1;Target=comp159682_c0_seq1 1137 1616 -
ChrX	stalkie_big_nohaplotig	exon	21428654	21428900	98	-	.	Parent=comp159682_c0_seq1.mrna1;Target=comp159682_c0_seq1 1617 1863 -
ChrX	stalkie_big_nohaplotig	CDS	21427753	21428214	.	-	0	Parent=comp159682_c0_seq1.mrna1;Target=comp159682_c0_seq1 1155 1616 .
ChrX	stalkie_big_nohaplotig	CDS	21428654	21428761	.	-	0	Parent=comp159682_c0_seq1.mrna1;Target=comp159682_c0_seq1 1617 1724 .
ChrX	gffcl	locus	21472119	21472638	.	-	.	ID=RLOC_00001281;geneIDs=comp82225_c0_seq1.path1;transcripts=comp82225_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21472119	21472638	.	-	.	ID=comp82225_c0_seq1.mrna1;geneID=comp82225_c0_seq1.path1;Name=comp82225_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=451;mismatches=1;indels=1;unknowns=0;Target=comp82225_c0_seq1 337 275 .;locus=RLOC_00001281
ChrX	stalkie_big_nohaplotig	exon	21472119	21472501	99	-	.	Parent=comp82225_c0_seq1.mrna1;Target=comp82225_c0_seq1 453 71 .
ChrX	stalkie_big_nohaplotig	exon	21472570	21472638	98	-	.	Parent=comp82225_c0_seq1.mrna1;Target=comp82225_c0_seq1 70 1 .
ChrX	stalkie_big_nohaplotig	CDS	21472235	21472297	.	-	0	Parent=comp82225_c0_seq1.mrna1
ChrX	gffcl	locus	21506886	21514179	.	-	.	ID=RLOC_00001282;geneIDs=comp154863_c2_seq1.path1;transcripts=comp154863_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21506886	21514179	.	-	.	ID=comp154863_c2_seq1.mrna1;geneID=comp154863_c2_seq1.path1;Name=comp154863_c2_seq1;Dir=sensecoverage=99.5;identity=99.1;matches=1029;mismatches=7;indels=2;unknowns=0;locus=RLOC_00001282
ChrX	stalkie_big_nohaplotig	exon	21506886	21507294	99	-	.	Parent=comp154863_c2_seq1.mrna1;Target=comp154863_c2_seq1 634 1042 +
ChrX	stalkie_big_nohaplotig	exon	21507352	21507381	100	-	.	Parent=comp154863_c2_seq1.mrna1;Target=comp154863_c2_seq1 604 633 +
ChrX	stalkie_big_nohaplotig	exon	21511473	21511601	98	-	.	Parent=comp154863_c2_seq1.mrna1;Target=comp154863_c2_seq1 475 603 +
ChrX	stalkie_big_nohaplotig	exon	21512537	21512641	100	-	.	Parent=comp154863_c2_seq1.mrna1;Target=comp154863_c2_seq1 370 474 +
ChrX	stalkie_big_nohaplotig	exon	21512722	21512808	100	-	.	Parent=comp154863_c2_seq1.mrna1;Target=comp154863_c2_seq1 283 369 +
ChrX	stalkie_big_nohaplotig	exon	21512889	21513008	99	-	.	Parent=comp154863_c2_seq1.mrna1;Target=comp154863_c2_seq1 163 282 +
ChrX	stalkie_big_nohaplotig	exon	21513068	21513177	99	-	.	Parent=comp154863_c2_seq1.mrna1;Target=comp154863_c2_seq1 53 162 +
ChrX	stalkie_big_nohaplotig	exon	21514134	21514179	91	-	.	Parent=comp154863_c2_seq1.mrna1;Target=comp154863_c2_seq1 5 52 +
ChrX	stalkie_big_nohaplotig	CDS	21507377	21507381	.	-	2	Parent=comp154863_c2_seq1.mrna1;Target=comp154863_c2_seq1 604 608 +
ChrX	stalkie_big_nohaplotig	CDS	21511473	21511601	.	-	2	Parent=comp154863_c2_seq1.mrna1;Target=comp154863_c2_seq1 475 603 +
ChrX	stalkie_big_nohaplotig	CDS	21512537	21512641	.	-	2	Parent=comp154863_c2_seq1.mrna1;Target=comp154863_c2_seq1 370 474 +
ChrX	stalkie_big_nohaplotig	CDS	21512722	21512808	.	-	2	Parent=comp154863_c2_seq1.mrna1;Target=comp154863_c2_seq1 283 369 +
ChrX	stalkie_big_nohaplotig	CDS	21512889	21513008	.	-	2	Parent=comp154863_c2_seq1.mrna1;Target=comp154863_c2_seq1 163 282 +
ChrX	stalkie_big_nohaplotig	CDS	21513068	21513116	.	-	0	Parent=comp154863_c2_seq1.mrna1;Target=comp154863_c2_seq1 114 162 +
ChrX	gffcl	locus	21548878	21553577	.	+	.	ID=RLOC_00001283;geneIDs=FBgn0261647.1.path1;transcripts=FBgn0261647.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21548878	21553577	.	+	.	ID=FBgn0261647.1.mrna1;geneID=FBgn0261647.1.path1;Name=FBgn0261647.1;Dir=sensecoverage=100.0;identity=99.3;matches=3119;mismatches=9;indels=13;unknowns=0;locus=RLOC_00001283
ChrX	stalkie_big_nohaplotig	exon	21548878	21549514	99	+	.	Parent=FBgn0261647.1.mrna1;Target=FBgn0261647.1 1 637 +
ChrX	stalkie_big_nohaplotig	exon	21549826	21550934	99	+	.	Parent=FBgn0261647.1.mrna1;Target=FBgn0261647.1 638 1749 +
ChrX	stalkie_big_nohaplotig	exon	21552134	21552682	100	+	.	Parent=FBgn0261647.1.mrna1;Target=FBgn0261647.1 1750 2298 +
ChrX	stalkie_big_nohaplotig	exon	21552745	21553577	98	+	.	Parent=FBgn0261647.1.mrna1;Target=FBgn0261647.1 2299 3141 +
ChrX	stalkie_big_nohaplotig	CDS	21548878	21549514	.	+	0	Parent=FBgn0261647.1.mrna1;Target=FBgn0261647.1 1 637 +
ChrX	stalkie_big_nohaplotig	CDS	21549826	21550934	.	+	2	Parent=FBgn0261647.1.mrna1;Target=FBgn0261647.1 638 1749 +
ChrX	stalkie_big_nohaplotig	CDS	21552134	21552682	.	+	0	Parent=FBgn0261647.1.mrna1;Target=FBgn0261647.1 1750 2298 +
ChrX	stalkie_big_nohaplotig	CDS	21552745	21553577	.	+	0	Parent=FBgn0261647.1.mrna1;Target=FBgn0261647.1 2299 3141 +
ChrX	gffcl	locus	21559123	21559716	.	+	.	ID=RLOC_00001284;geneIDs=comp154971_c0_seq1.path1;transcripts=comp154971_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21559123	21559716	.	+	.	ID=comp154971_c0_seq1.mrna1;geneID=comp154971_c0_seq1.path1;Name=comp154971_c0_seq1;Dir=indeterminatecoverage=65.2;identity=93.8;matches=571;mismatches=13;indels=25;unknowns=0;Target=comp154971_c0_seq1 297 247 .;locus=RLOC_00001284
ChrX	stalkie_big_nohaplotig	exon	21559123	21559210	91	+	.	Parent=comp154971_c0_seq1.mrna1;Target=comp154971_c0_seq1 338 246 .
ChrX	stalkie_big_nohaplotig	exon	21559220	21559716	94	+	.	Parent=comp154971_c0_seq1.mrna1;Target=comp154971_c0_seq1 932 418 .
ChrX	stalkie_big_nohaplotig	CDS	21559124	21559169	.	+	0	Parent=comp154971_c0_seq1.mrna1
ChrX	gffcl	locus	21562758	21562959	.	+	.	ID=RLOC_00001285;geneIDs=comp99169_c0_seq1.path1;transcripts=comp99169_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21562758	21562959	.	+	.	ID=comp99169_c0_seq1.mrna1;geneID=comp99169_c0_seq1.path1;Name=comp99169_c0_seq1;Dir=indeterminatecoverage=96.2;identity=98.5;matches=199;mismatches=1;indels=2;unknowns=0;Target=comp99169_c0_seq1 206 7 .;CDS_Target=comp99169_c0_seq1 206 147 .;locus=RLOC_00001285
ChrX	stalkie_big_nohaplotig	exon	21562758	21562959	98	+	.	Parent=comp99169_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21562900	21562959	.	+	0	Parent=comp99169_c0_seq1.mrna1
ChrX	gffcl	locus	21567143	21572591	.	-	.	ID=RLOC_00001286;geneIDs=FBgn0031418.1.path1;transcripts=FBgn0031418.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21567143	21572591	.	-	.	ID=FBgn0031418.1.mrna1;geneID=FBgn0031418.1.path1;Name=FBgn0031418.1;Dir=sensecoverage=100.0;identity=99.7;matches=1095;mismatches=3;indels=0;unknowns=0;locus=RLOC_00001286
ChrX	stalkie_big_nohaplotig	exon	21567143	21567403	100	-	.	Parent=FBgn0031418.1.mrna1;Target=FBgn0031418.1 838 1098 +
ChrX	stalkie_big_nohaplotig	exon	21567475	21567721	100	-	.	Parent=FBgn0031418.1.mrna1;Target=FBgn0031418.1 591 837 +
ChrX	stalkie_big_nohaplotig	exon	21571927	21572218	99	-	.	Parent=FBgn0031418.1.mrna1;Target=FBgn0031418.1 299 590 +
ChrX	stalkie_big_nohaplotig	exon	21572294	21572591	99	-	.	Parent=FBgn0031418.1.mrna1;Target=FBgn0031418.1 1 298 +
ChrX	stalkie_big_nohaplotig	CDS	21567143	21567403	.	-	0	Parent=FBgn0031418.1.mrna1;Target=FBgn0031418.1 838 1098 +
ChrX	stalkie_big_nohaplotig	CDS	21567475	21567721	.	-	1	Parent=FBgn0031418.1.mrna1;Target=FBgn0031418.1 591 837 +
ChrX	stalkie_big_nohaplotig	CDS	21571927	21572218	.	-	2	Parent=FBgn0031418.1.mrna1;Target=FBgn0031418.1 299 590 +
ChrX	stalkie_big_nohaplotig	CDS	21572294	21572591	.	-	0	Parent=FBgn0031418.1.mrna1;Target=FBgn0031418.1 1 298 +
ChrX	gffcl	locus	21567888	21568781	.	-	.	ID=RLOC_00001287;geneIDs=comp137033_c0_seq1.path1;transcripts=comp137033_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21567888	21568781	.	-	.	ID=comp137033_c0_seq1.mrna1;geneID=comp137033_c0_seq1.path1;Name=comp137033_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.6;matches=891;mismatches=3;indels=1;unknowns=0;Target=comp137033_c0_seq1 895 1 .;CDS_Target=comp137033_c0_seq1 894 691 .;locus=RLOC_00001287
ChrX	stalkie_big_nohaplotig	exon	21567888	21568781	99	-	.	Parent=comp137033_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21567889	21568092	.	-	0	Parent=comp137033_c0_seq1.mrna1
ChrX	gffcl	locus	21577356	21577936	.	+	.	ID=RLOC_00001288;geneIDs=FBgn0031419.1.path1;transcripts=FBgn0031419.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21577356	21577936	.	+	.	ID=FBgn0031419.1.mrna1;geneID=FBgn0031419.1.path1;Name=FBgn0031419.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=581;mismatches=0;indels=1;unknowns=0;Target=FBgn0031419.1 582 1 .;CDS_Target=FBgn0031419.1 26 3 .;locus=RLOC_00001288
ChrX	stalkie_big_nohaplotig	exon	21577356	21577936	99	+	.	Parent=FBgn0031419.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21577358	21577380	.	+	0	Parent=FBgn0031419.1.mrna1
ChrX	gffcl	locus	21608281	23532635	.	-	.	ID=RLOC_00001289;geneIDs=comp161738_c2_seq1.path1;transcripts=comp161738_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21608281	23532635	.	-	.	ID=comp161738_c2_seq1.mrna1;geneID=comp161738_c2_seq1.path1;Name=comp161738_c2_seq1;Dir=indeterminatecoverage=86.4;identity=95.1;matches=1234;mismatches=8;indels=55;unknowns=0;Target=comp161738_c2_seq1 127 11 .;locus=RLOC_00001289
ChrX	stalkie_big_nohaplotig	exon	21608281	21608287	100	-	.	Parent=comp161738_c2_seq1.mrna1;Target=comp161738_c2_seq1 1338 1332 .
ChrX	stalkie_big_nohaplotig	exon	21608618	21608629	83	-	.	Parent=comp161738_c2_seq1.mrna1;Target=comp161738_c2_seq1 1331 1320 .
ChrX	stalkie_big_nohaplotig	exon	21609901	21609908	75	-	.	Parent=comp161738_c2_seq1.mrna1;Target=comp161738_c2_seq1 1319 1312 .
ChrX	stalkie_big_nohaplotig	exon	21615837	21615849	100	-	.	Parent=comp161738_c2_seq1.mrna1;Target=comp161738_c2_seq1 1311 1299 .
ChrX	stalkie_big_nohaplotig	exon	21618824	21618829	100	-	.	Parent=comp161738_c2_seq1.mrna1;Target=comp161738_c2_seq1 1298 1293 .
ChrX	stalkie_big_nohaplotig	exon	21628420	21628425	9	-	.	Parent=comp161738_c2_seq1.mrna1;Target=comp161738_c2_seq1 1292 1232 .
ChrX	stalkie_big_nohaplotig	exon	21630006	21630012	85	-	.	Parent=comp161738_c2_seq1.mrna1;Target=comp161738_c2_seq1 1231 1225 .
ChrX	stalkie_big_nohaplotig	exon	21631303	21631310	100	-	.	Parent=comp161738_c2_seq1.mrna1;Target=comp161738_c2_seq1 1224 1217 .
ChrX	stalkie_big_nohaplotig	exon	21632382	21632384	100	-	.	Parent=comp161738_c2_seq1.mrna1;Target=comp161738_c2_seq1 1175 1173 .
ChrX	stalkie_big_nohaplotig	exon	23531464	23532635	99	-	.	Parent=comp161738_c2_seq1.mrna1;Target=comp161738_c2_seq1 1172 1 .
ChrX	stalkie_big_nohaplotig	CDS	23532509	23532625	.	-	0	Parent=comp161738_c2_seq1.mrna1
ChrX	gffcl	locus	21630676	21634517	.	+	.	ID=RLOC_00001290;geneIDs=AGAP013100.1.path1;transcripts=AGAP013100.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21630676	21634517	.	+	.	ID=AGAP013100.1.mrna1;geneID=AGAP013100.1.path1;Name=AGAP013100.1;Dir=sensecoverage=100.0;identity=100.0;matches=885;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001290
ChrX	stalkie_big_nohaplotig	exon	21630676	21630780	100	+	.	Parent=AGAP013100.1.mrna1;Target=AGAP013100.1 1 105 +
ChrX	stalkie_big_nohaplotig	exon	21630862	21630944	100	+	.	Parent=AGAP013100.1.mrna1;Target=AGAP013100.1 106 188 +
ChrX	stalkie_big_nohaplotig	exon	21633724	21634030	100	+	.	Parent=AGAP013100.1.mrna1;Target=AGAP013100.1 189 495 +
ChrX	stalkie_big_nohaplotig	exon	21634128	21634517	100	+	.	Parent=AGAP013100.1.mrna1;Target=AGAP013100.1 496 885 +
ChrX	stalkie_big_nohaplotig	CDS	21630676	21630780	.	+	0	Parent=AGAP013100.1.mrna1;Target=AGAP013100.1 1 105 +
ChrX	stalkie_big_nohaplotig	CDS	21630862	21630944	.	+	0	Parent=AGAP013100.1.mrna1;Target=AGAP013100.1 106 188 +
ChrX	stalkie_big_nohaplotig	CDS	21633724	21634030	.	+	1	Parent=AGAP013100.1.mrna1;Target=AGAP013100.1 189 495 +
ChrX	stalkie_big_nohaplotig	CDS	21634128	21634517	.	+	0	Parent=AGAP013100.1.mrna1;Target=AGAP013100.1 496 885 +
ChrX	gffcl	locus	21646785	21647074	.	-	.	ID=RLOC_00001291;geneIDs=comp66698_c0_seq1.path1;transcripts=comp66698_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21646785	21647074	.	-	.	ID=comp66698_c0_seq1.mrna1;geneID=comp66698_c0_seq1.path1;Name=comp66698_c0_seq1;Dir=indeterminatecoverage=95.4;identity=99.7;matches=289;mismatches=1;indels=0;unknowns=0;Target=comp66698_c0_seq1 290 1 .;CDS_Target=comp66698_c0_seq1 190 71 .;locus=RLOC_00001291
ChrX	stalkie_big_nohaplotig	exon	21646785	21647074	99	-	.	Parent=comp66698_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21646885	21647004	.	-	0	Parent=comp66698_c0_seq1.mrna1
ChrX	gffcl	locus	21666147	21675621	.	+	.	ID=RLOC_00001292;geneIDs=FBgn0004797.1.path1;transcripts=FBgn0004797.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21666147	21675621	.	+	.	ID=FBgn0004797.1.mrna1;geneID=FBgn0004797.1.path1;Name=FBgn0004797.1;Dir=sensecoverage=97.4;identity=99.8;matches=1679;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001292
ChrX	stalkie_big_nohaplotig	exon	21666147	21666475	99	+	.	Parent=FBgn0004797.1.mrna1;Target=FBgn0004797.1 46 374 +
ChrX	stalkie_big_nohaplotig	exon	21666565	21666693	100	+	.	Parent=FBgn0004797.1.mrna1;Target=FBgn0004797.1 375 503 +
ChrX	stalkie_big_nohaplotig	exon	21666754	21666845	100	+	.	Parent=FBgn0004797.1.mrna1;Target=FBgn0004797.1 504 595 +
ChrX	stalkie_big_nohaplotig	exon	21667376	21667428	100	+	.	Parent=FBgn0004797.1.mrna1;Target=FBgn0004797.1 596 648 +
ChrX	stalkie_big_nohaplotig	exon	21673895	21674003	100	+	.	Parent=FBgn0004797.1.mrna1;Target=FBgn0004797.1 649 757 +
ChrX	stalkie_big_nohaplotig	exon	21674387	21674536	99	+	.	Parent=FBgn0004797.1.mrna1;Target=FBgn0004797.1 758 907 +
ChrX	stalkie_big_nohaplotig	exon	21674609	21674922	100	+	.	Parent=FBgn0004797.1.mrna1;Target=FBgn0004797.1 908 1221 +
ChrX	stalkie_big_nohaplotig	exon	21674989	21675155	100	+	.	Parent=FBgn0004797.1.mrna1;Target=FBgn0004797.1 1222 1388 +
ChrX	stalkie_big_nohaplotig	exon	21675215	21675320	100	+	.	Parent=FBgn0004797.1.mrna1;Target=FBgn0004797.1 1389 1494 +
ChrX	stalkie_big_nohaplotig	exon	21675388	21675621	100	+	.	Parent=FBgn0004797.1.mrna1;Target=FBgn0004797.1 1495 1728 +
ChrX	stalkie_big_nohaplotig	CDS	21666147	21666475	.	+	0	Parent=FBgn0004797.1.mrna1;Target=FBgn0004797.1 46 374 +
ChrX	stalkie_big_nohaplotig	CDS	21666565	21666693	.	+	1	Parent=FBgn0004797.1.mrna1;Target=FBgn0004797.1 375 503 +
ChrX	stalkie_big_nohaplotig	CDS	21666754	21666845	.	+	1	Parent=FBgn0004797.1.mrna1;Target=FBgn0004797.1 504 595 +
ChrX	stalkie_big_nohaplotig	CDS	21667376	21667428	.	+	2	Parent=FBgn0004797.1.mrna1;Target=FBgn0004797.1 596 648 +
ChrX	stalkie_big_nohaplotig	CDS	21673895	21674003	.	+	0	Parent=FBgn0004797.1.mrna1;Target=FBgn0004797.1 649 757 +
ChrX	stalkie_big_nohaplotig	CDS	21674387	21674536	.	+	2	Parent=FBgn0004797.1.mrna1;Target=FBgn0004797.1 758 907 +
ChrX	stalkie_big_nohaplotig	CDS	21674609	21674922	.	+	2	Parent=FBgn0004797.1.mrna1;Target=FBgn0004797.1 908 1221 +
ChrX	stalkie_big_nohaplotig	CDS	21674989	21675155	.	+	0	Parent=FBgn0004797.1.mrna1;Target=FBgn0004797.1 1222 1388 +
ChrX	stalkie_big_nohaplotig	CDS	21675215	21675320	.	+	1	Parent=FBgn0004797.1.mrna1;Target=FBgn0004797.1 1389 1494 +
ChrX	stalkie_big_nohaplotig	CDS	21675388	21675621	.	+	0	Parent=FBgn0004797.1.mrna1;Target=FBgn0004797.1 1495 1728 +
ChrX	gffcl	locus	21668221	21672517	.	-	.	ID=RLOC_00001293;geneIDs=FBgn0022213.1.path1;transcripts=FBgn0022213.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21668221	21672517	.	-	.	ID=FBgn0022213.1.mrna1;geneID=FBgn0022213.1.path1;Name=FBgn0022213.1;Dir=sensecoverage=100.0;identity=99.6;matches=2925;mismatches=12;indels=0;unknowns=0;locus=RLOC_00001293
ChrX	stalkie_big_nohaplotig	exon	21668221	21668946	99	-	.	Parent=FBgn0022213.1.mrna1;Target=FBgn0022213.1 2212 2937 +
ChrX	stalkie_big_nohaplotig	exon	21669009	21669306	100	-	.	Parent=FBgn0022213.1.mrna1;Target=FBgn0022213.1 1914 2211 +
ChrX	stalkie_big_nohaplotig	exon	21669368	21669524	100	-	.	Parent=FBgn0022213.1.mrna1;Target=FBgn0022213.1 1757 1913 +
ChrX	stalkie_big_nohaplotig	exon	21669581	21669684	100	-	.	Parent=FBgn0022213.1.mrna1;Target=FBgn0022213.1 1653 1756 +
ChrX	stalkie_big_nohaplotig	exon	21669754	21669952	98	-	.	Parent=FBgn0022213.1.mrna1;Target=FBgn0022213.1 1454 1652 +
ChrX	stalkie_big_nohaplotig	exon	21670024	21670507	99	-	.	Parent=FBgn0022213.1.mrna1;Target=FBgn0022213.1 970 1453 +
ChrX	stalkie_big_nohaplotig	exon	21670575	21671270	99	-	.	Parent=FBgn0022213.1.mrna1;Target=FBgn0022213.1 274 969 +
ChrX	stalkie_big_nohaplotig	exon	21672164	21672312	100	-	.	Parent=FBgn0022213.1.mrna1;Target=FBgn0022213.1 125 273 +
ChrX	stalkie_big_nohaplotig	exon	21672394	21672517	100	-	.	Parent=FBgn0022213.1.mrna1;Target=FBgn0022213.1 1 124 +
ChrX	stalkie_big_nohaplotig	CDS	21668221	21668946	.	-	0	Parent=FBgn0022213.1.mrna1;Target=FBgn0022213.1 2212 2937 +
ChrX	stalkie_big_nohaplotig	CDS	21669009	21669306	.	-	1	Parent=FBgn0022213.1.mrna1;Target=FBgn0022213.1 1914 2211 +
ChrX	stalkie_big_nohaplotig	CDS	21669368	21669524	.	-	2	Parent=FBgn0022213.1.mrna1;Target=FBgn0022213.1 1757 1913 +
ChrX	stalkie_big_nohaplotig	CDS	21669581	21669684	.	-	1	Parent=FBgn0022213.1.mrna1;Target=FBgn0022213.1 1653 1756 +
ChrX	stalkie_big_nohaplotig	CDS	21669754	21669952	.	-	2	Parent=FBgn0022213.1.mrna1;Target=FBgn0022213.1 1454 1652 +
ChrX	stalkie_big_nohaplotig	CDS	21670024	21670507	.	-	0	Parent=FBgn0022213.1.mrna1;Target=FBgn0022213.1 970 1453 +
ChrX	stalkie_big_nohaplotig	CDS	21670575	21671270	.	-	0	Parent=FBgn0022213.1.mrna1;Target=FBgn0022213.1 274 969 +
ChrX	stalkie_big_nohaplotig	CDS	21672164	21672312	.	-	2	Parent=FBgn0022213.1.mrna1;Target=FBgn0022213.1 125 273 +
ChrX	stalkie_big_nohaplotig	CDS	21672394	21672517	.	-	0	Parent=FBgn0022213.1.mrna1;Target=FBgn0022213.1 1 124 +
ChrX	gffcl	locus	21692067	21693116	.	+	.	ID=RLOC_00001295;geneIDs=ORF1606.path1;transcripts=ORF1606.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21692067	21693116	.	+	.	ID=ORF1606.mrna1;geneID=ORF1606.path1;Name=ORF1606;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1038;mismatches=12;indels=0;unknowns=0;Target=ORF1606 1050 1 .;locus=RLOC_00001295
ChrX	stalkie_big_nohaplotig	exon	21692067	21693116	98	+	.	Parent=ORF1606.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21692067	21693116	.	+	0	Parent=ORF1606.mrna1
ChrX	gffcl	locus	21694154	21695741	.	-	.	ID=RLOC_00001296;geneIDs=FBgn0032612.1.path1;transcripts=FBgn0032612.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21694154	21695741	.	-	.	ID=FBgn0032612.1.mrna1;geneID=FBgn0032612.1.path1;Name=FBgn0032612.1;Dir=sensecoverage=98.2;identity=99.6;matches=1036;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001296
ChrX	stalkie_big_nohaplotig	exon	21694154	21694715	99	-	.	Parent=FBgn0032612.1.mrna1;Target=FBgn0032612.1 479 1040 +
ChrX	stalkie_big_nohaplotig	exon	21695119	21695307	100	-	.	Parent=FBgn0032612.1.mrna1;Target=FBgn0032612.1 290 478 +
ChrX	stalkie_big_nohaplotig	exon	21695379	21695621	100	-	.	Parent=FBgn0032612.1.mrna1;Target=FBgn0032612.1 47 289 +
ChrX	stalkie_big_nohaplotig	exon	21695696	21695741	100	-	.	Parent=FBgn0032612.1.mrna1;Target=FBgn0032612.1 1 46 +
ChrX	stalkie_big_nohaplotig	CDS	21694156	21694715	.	-	2	Parent=FBgn0032612.1.mrna1;Target=FBgn0032612.1 479 1038 +
ChrX	stalkie_big_nohaplotig	CDS	21695119	21695307	.	-	2	Parent=FBgn0032612.1.mrna1;Target=FBgn0032612.1 290 478 +
ChrX	stalkie_big_nohaplotig	CDS	21695379	21695621	.	-	2	Parent=FBgn0032612.1.mrna1;Target=FBgn0032612.1 47 289 +
ChrX	stalkie_big_nohaplotig	CDS	21695696	21695741	.	-	0	Parent=FBgn0032612.1.mrna1;Target=FBgn0032612.1 1 46 +
ChrX	gffcl	locus	21696988	21697636	.	-	.	ID=RLOC_00001297;geneIDs=comp113339_c0_seq1.path1;transcripts=comp113339_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21696988	21697636	.	-	.	ID=comp113339_c0_seq1.mrna1;geneID=comp113339_c0_seq1.path1;Name=comp113339_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=648;mismatches=1;indels=0;unknowns=0;Target=comp113339_c0_seq1 649 1 .;CDS_Target=comp113339_c0_seq1 225 79 .;locus=RLOC_00001297
ChrX	stalkie_big_nohaplotig	exon	21696988	21697636	99	-	.	Parent=comp113339_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21697412	21697558	.	-	0	Parent=comp113339_c0_seq1.mrna1
ChrX	gffcl	locus	21703581	21704630	.	-	.	ID=RLOC_00001298;geneIDs=ORF1606.path2;transcripts=ORF1606.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	21703581	21704630	.	-	.	ID=ORF1606.mrna2;geneID=ORF1606.path2;Name=ORF1606;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1037;mismatches=13;indels=0;unknowns=0;Target=ORF1606 1050 1 .;locus=RLOC_00001298
ChrX	stalkie_big_nohaplotig	exon	21703581	21704630	98	-	.	Parent=ORF1606.mrna2
ChrX	stalkie_big_nohaplotig	CDS	21703581	21704630	.	-	0	Parent=ORF1606.mrna2
ChrX	gffcl	locus	21706243	21719423	.	-	.	ID=RLOC_00001299;geneIDs=FBgn0031999.1.path1;transcripts=FBgn0031999.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21706243	21719423	.	-	.	ID=FBgn0031999.1.mrna1;geneID=FBgn0031999.1.path1;Name=FBgn0031999.1;Dir=sensecoverage=100.0;identity=99.9;matches=3527;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001299
ChrX	stalkie_big_nohaplotig	exon	21706243	21706482	100	-	.	Parent=FBgn0031999.1.mrna1;Target=FBgn0031999.1 3292 3531 +
ChrX	stalkie_big_nohaplotig	exon	21706875	21706973	100	-	.	Parent=FBgn0031999.1.mrna1;Target=FBgn0031999.1 3193 3291 +
ChrX	stalkie_big_nohaplotig	exon	21707049	21707194	100	-	.	Parent=FBgn0031999.1.mrna1;Target=FBgn0031999.1 3047 3192 +
ChrX	stalkie_big_nohaplotig	exon	21707251	21707380	100	-	.	Parent=FBgn0031999.1.mrna1;Target=FBgn0031999.1 2917 3046 +
ChrX	stalkie_big_nohaplotig	exon	21707442	21707590	100	-	.	Parent=FBgn0031999.1.mrna1;Target=FBgn0031999.1 2768 2916 +
ChrX	stalkie_big_nohaplotig	exon	21708569	21708896	100	-	.	Parent=FBgn0031999.1.mrna1;Target=FBgn0031999.1 2440 2767 +
ChrX	stalkie_big_nohaplotig	exon	21708972	21709196	99	-	.	Parent=FBgn0031999.1.mrna1;Target=FBgn0031999.1 2215 2439 +
ChrX	stalkie_big_nohaplotig	exon	21710221	21710463	99	-	.	Parent=FBgn0031999.1.mrna1;Target=FBgn0031999.1 1972 2214 +
ChrX	stalkie_big_nohaplotig	exon	21710540	21710688	99	-	.	Parent=FBgn0031999.1.mrna1;Target=FBgn0031999.1 1823 1971 +
ChrX	stalkie_big_nohaplotig	exon	21716387	21716610	100	-	.	Parent=FBgn0031999.1.mrna1;Target=FBgn0031999.1 1599 1822 +
ChrX	stalkie_big_nohaplotig	exon	21717826	21719423	100	-	.	Parent=FBgn0031999.1.mrna1;Target=FBgn0031999.1 1 1598 +
ChrX	stalkie_big_nohaplotig	CDS	21706243	21706482	.	-	0	Parent=FBgn0031999.1.mrna1;Target=FBgn0031999.1 3292 3531 +
ChrX	stalkie_big_nohaplotig	CDS	21706875	21706973	.	-	0	Parent=FBgn0031999.1.mrna1;Target=FBgn0031999.1 3193 3291 +
ChrX	stalkie_big_nohaplotig	CDS	21707049	21707194	.	-	2	Parent=FBgn0031999.1.mrna1;Target=FBgn0031999.1 3047 3192 +
ChrX	stalkie_big_nohaplotig	CDS	21707251	21707380	.	-	0	Parent=FBgn0031999.1.mrna1;Target=FBgn0031999.1 2917 3046 +
ChrX	stalkie_big_nohaplotig	CDS	21707442	21707590	.	-	2	Parent=FBgn0031999.1.mrna1;Target=FBgn0031999.1 2768 2916 +
ChrX	stalkie_big_nohaplotig	CDS	21708569	21708896	.	-	0	Parent=FBgn0031999.1.mrna1;Target=FBgn0031999.1 2440 2767 +
ChrX	stalkie_big_nohaplotig	CDS	21708972	21709196	.	-	0	Parent=FBgn0031999.1.mrna1;Target=FBgn0031999.1 2215 2439 +
ChrX	stalkie_big_nohaplotig	CDS	21710221	21710463	.	-	0	Parent=FBgn0031999.1.mrna1;Target=FBgn0031999.1 1972 2214 +
ChrX	stalkie_big_nohaplotig	CDS	21710540	21710688	.	-	2	Parent=FBgn0031999.1.mrna1;Target=FBgn0031999.1 1823 1971 +
ChrX	stalkie_big_nohaplotig	CDS	21716387	21716610	.	-	1	Parent=FBgn0031999.1.mrna1;Target=FBgn0031999.1 1599 1822 +
ChrX	stalkie_big_nohaplotig	CDS	21717826	21719423	.	-	0	Parent=FBgn0031999.1.mrna1;Target=FBgn0031999.1 1 1598 +
ChrX	gffcl	locus	21712554	21715533	.	+	.	ID=RLOC_00001300;geneIDs=FBgn0031716.1.path1;transcripts=FBgn0031716.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21712554	21715533	.	+	.	ID=FBgn0031716.1.mrna1;geneID=FBgn0031716.1.path1;Name=FBgn0031716.1;Dir=sensecoverage=100.0;identity=99.7;matches=1442;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001300
ChrX	stalkie_big_nohaplotig	exon	21712554	21713500	99	+	.	Parent=FBgn0031716.1.mrna1;Target=FBgn0031716.1 1 947 +
ChrX	stalkie_big_nohaplotig	exon	21714942	21715170	100	+	.	Parent=FBgn0031716.1.mrna1;Target=FBgn0031716.1 948 1176 +
ChrX	stalkie_big_nohaplotig	exon	21715264	21715533	99	+	.	Parent=FBgn0031716.1.mrna1;Target=FBgn0031716.1 1177 1446 +
ChrX	stalkie_big_nohaplotig	CDS	21712554	21713500	.	+	0	Parent=FBgn0031716.1.mrna1;Target=FBgn0031716.1 1 947 +
ChrX	stalkie_big_nohaplotig	CDS	21714942	21715170	.	+	1	Parent=FBgn0031716.1.mrna1;Target=FBgn0031716.1 948 1176 +
ChrX	stalkie_big_nohaplotig	CDS	21715264	21715533	.	+	0	Parent=FBgn0031716.1.mrna1;Target=FBgn0031716.1 1177 1446 +
ChrX	gffcl	locus	21722471	21723901	.	+	.	ID=RLOC_00001301;geneIDs=FBgn0031713.1.path1;transcripts=FBgn0031713.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21722471	21723901	.	+	.	ID=FBgn0031713.1.mrna1;geneID=FBgn0031713.1.path1;Name=FBgn0031713.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1428;mismatches=3;indels=0;unknowns=0;Target=FBgn0031713.1 1431 1 .;locus=RLOC_00001301
ChrX	stalkie_big_nohaplotig	exon	21722471	21723901	99	+	.	Parent=FBgn0031713.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21722471	21723901	.	+	0	Parent=FBgn0031713.1.mrna1
ChrX	gffcl	locus	21750768	21760122	.	+	.	ID=RLOC_00001302;geneIDs=FBgn0003557.1.path1;transcripts=FBgn0003557.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21750768	21760122	.	+	.	ID=FBgn0003557.1.mrna1;geneID=FBgn0003557.1.path1;Name=FBgn0003557.1;Dir=sensecoverage=100.0;identity=99.9;matches=2976;mismatches=3;indels=0;unknowns=0;locus=RLOC_00001302
ChrX	stalkie_big_nohaplotig	exon	21750768	21750969	100	+	.	Parent=FBgn0003557.1.mrna1;Target=FBgn0003557.1 1 202 +
ChrX	stalkie_big_nohaplotig	exon	21751354	21751496	100	+	.	Parent=FBgn0003557.1.mrna1;Target=FBgn0003557.1 203 345 +
ChrX	stalkie_big_nohaplotig	exon	21756058	21756912	99	+	.	Parent=FBgn0003557.1.mrna1;Target=FBgn0003557.1 346 1200 +
ChrX	stalkie_big_nohaplotig	exon	21757004	21757469	100	+	.	Parent=FBgn0003557.1.mrna1;Target=FBgn0003557.1 1201 1666 +
ChrX	stalkie_big_nohaplotig	exon	21757531	21758377	99	+	.	Parent=FBgn0003557.1.mrna1;Target=FBgn0003557.1 1667 2513 +
ChrX	stalkie_big_nohaplotig	exon	21759580	21759778	100	+	.	Parent=FBgn0003557.1.mrna1;Target=FBgn0003557.1 2514 2712 +
ChrX	stalkie_big_nohaplotig	exon	21759856	21760122	99	+	.	Parent=FBgn0003557.1.mrna1;Target=FBgn0003557.1 2713 2979 +
ChrX	stalkie_big_nohaplotig	CDS	21750768	21750969	.	+	0	Parent=FBgn0003557.1.mrna1;Target=FBgn0003557.1 1 202 +
ChrX	stalkie_big_nohaplotig	CDS	21751354	21751496	.	+	2	Parent=FBgn0003557.1.mrna1;Target=FBgn0003557.1 203 345 +
ChrX	stalkie_big_nohaplotig	CDS	21756058	21756912	.	+	0	Parent=FBgn0003557.1.mrna1;Target=FBgn0003557.1 346 1200 +
ChrX	stalkie_big_nohaplotig	CDS	21757004	21757469	.	+	0	Parent=FBgn0003557.1.mrna1;Target=FBgn0003557.1 1201 1666 +
ChrX	stalkie_big_nohaplotig	CDS	21757531	21758377	.	+	2	Parent=FBgn0003557.1.mrna1;Target=FBgn0003557.1 1667 2513 +
ChrX	stalkie_big_nohaplotig	CDS	21759580	21759778	.	+	1	Parent=FBgn0003557.1.mrna1;Target=FBgn0003557.1 2514 2712 +
ChrX	stalkie_big_nohaplotig	CDS	21759856	21760122	.	+	0	Parent=FBgn0003557.1.mrna1;Target=FBgn0003557.1 2713 2979 +
ChrX	gffcl	locus	21771306	21772244	.	-	.	ID=RLOC_00001304;geneIDs=comp141691_c0_seq1.path1;transcripts=comp141691_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21771306	21772244	.	-	.	ID=comp141691_c0_seq1.mrna1;geneID=comp141691_c0_seq1.path1;Name=comp141691_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=937;mismatches=2;indels=0;unknowns=0;Target=comp141691_c0_seq1 939 1 .;CDS_Target=comp141691_c0_seq1 938 702 .;locus=RLOC_00001304
ChrX	stalkie_big_nohaplotig	exon	21771306	21772244	99	-	.	Parent=comp141691_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21771307	21771543	.	-	0	Parent=comp141691_c0_seq1.mrna1
ChrX	gffcl	locus	21775852	21777492	.	+	.	ID=RLOC_00001305;geneIDs=comp163737_c0_seq1.path1;transcripts=comp163737_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21775852	21777492	.	+	.	ID=comp163737_c0_seq1.mrna1;geneID=comp163737_c0_seq1.path1;Name=comp163737_c0_seq1;Dir=indeterminatecoverage=89.0;identity=94.7;matches=1559;mismatches=65;indels=23;unknowns=0;Target=comp163737_c0_seq1 1630 1 .;CDS_Target=comp163737_c0_seq1 1630 200 .;locus=RLOC_00001305
ChrX	stalkie_big_nohaplotig	exon	21775852	21777492	94	+	.	Parent=comp163737_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21776062	21777492	.	+	0	Parent=comp163737_c0_seq1.mrna1
ChrX	gffcl	locus	21787062	21787394	.	+	.	ID=RLOC_00001306;geneIDs=comp212999_c0_seq1.path1;transcripts=comp212999_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21787062	21787394	.	+	.	ID=comp212999_c0_seq1.mrna1;geneID=comp212999_c0_seq1.path1;Name=comp212999_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=333;mismatches=0;indels=0;unknowns=0;Target=comp212999_c0_seq1 333 1 .;CDS_Target=comp212999_c0_seq1 332 171 .;locus=RLOC_00001306
ChrX	stalkie_big_nohaplotig	exon	21787062	21787394	100	+	.	Parent=comp212999_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21787232	21787393	.	+	0	Parent=comp212999_c0_seq1.mrna1
ChrX	gffcl	locus	21834768	21835877	.	-	.	ID=RLOC_00001307;geneIDs=ORF1414.path1;transcripts=ORF1414.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21834768	21835877	.	-	.	ID=ORF1414.mrna1;geneID=ORF1414.path1;Name=ORF1414;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1104;mismatches=6;indels=0;unknowns=0;Target=ORF1414 1110 1 .;locus=RLOC_00001307
ChrX	stalkie_big_nohaplotig	exon	21834768	21835877	99	-	.	Parent=ORF1414.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21834768	21835877	.	-	0	Parent=ORF1414.mrna1
ChrX	gffcl	locus	21881696	21883003	.	+	.	ID=RLOC_00001308;geneIDs=ORF1676.path1;transcripts=ORF1676.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21881696	21883003	.	+	.	ID=ORF1676.mrna1;geneID=ORF1676.path1;Name=ORF1676;Dir=sensecoverage=100.0;identity=99.3;matches=1022;mismatches=7;indels=0;unknowns=0;locus=RLOC_00001308
ChrX	stalkie_big_nohaplotig	exon	21881696	21882040	98	+	.	Parent=ORF1676.mrna1;Target=ORF1676 1 345 +
ChrX	stalkie_big_nohaplotig	exon	21882101	21882298	99	+	.	Parent=ORF1676.mrna1;Target=ORF1676 346 543 +
ChrX	stalkie_big_nohaplotig	exon	21882362	21882558	99	+	.	Parent=ORF1676.mrna1;Target=ORF1676 544 740 +
ChrX	stalkie_big_nohaplotig	exon	21882715	21883003	99	+	.	Parent=ORF1676.mrna1;Target=ORF1676 741 1029 +
ChrX	stalkie_big_nohaplotig	CDS	21881696	21882040	.	+	0	Parent=ORF1676.mrna1;Target=ORF1676 1 345 +
ChrX	stalkie_big_nohaplotig	CDS	21882101	21882298	.	+	0	Parent=ORF1676.mrna1;Target=ORF1676 346 543 +
ChrX	stalkie_big_nohaplotig	CDS	21882362	21882558	.	+	0	Parent=ORF1676.mrna1;Target=ORF1676 544 740 +
ChrX	stalkie_big_nohaplotig	CDS	21882715	21883003	.	+	1	Parent=ORF1676.mrna1;Target=ORF1676 741 1029 +
ChrX	gffcl	locus	21965240	21966280	.	-	.	ID=RLOC_00001309;geneIDs=ORF1626.path1;transcripts=ORF1626.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	21965240	21966280	.	-	.	ID=ORF1626.mrna1;geneID=ORF1626.path1;Name=ORF1626;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1029;mismatches=12;indels=0;unknowns=0;Target=ORF1626 1041 1 .;locus=RLOC_00001309
ChrX	stalkie_big_nohaplotig	exon	21965240	21966280	98	-	.	Parent=ORF1626.mrna1
ChrX	stalkie_big_nohaplotig	CDS	21965240	21966280	.	-	0	Parent=ORF1626.mrna1
ChrX	gffcl	locus	22041070	22042161	.	-	.	ID=RLOC_00001311;geneIDs=ORF1473.path1;transcripts=ORF1473.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22041070	22042161	.	-	.	ID=ORF1473.mrna1;geneID=ORF1473.path1;Name=ORF1473;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1084;mismatches=8;indels=0;unknowns=0;Target=ORF1473 1092 1 .;locus=RLOC_00001311
ChrX	stalkie_big_nohaplotig	exon	22041070	22042161	99	-	.	Parent=ORF1473.mrna1
ChrX	stalkie_big_nohaplotig	CDS	22041070	22042161	.	-	0	Parent=ORF1473.mrna1
ChrX	gffcl	locus	22071136	22071445	.	-	.	ID=RLOC_00001312;geneIDs=comp6994_c0_seq1.path1;transcripts=comp6994_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22071136	22071445	.	-	.	ID=comp6994_c0_seq1.mrna1;geneID=comp6994_c0_seq1.path1;Name=comp6994_c0_seq1;Dir=indeterminatecoverage=97.3;identity=90.6;matches=299;mismatches=11;indels=20;unknowns=0;Target=comp6994_c0_seq1 339 10 .;CDS_Target=comp6994_c0_seq1 337 227 .;locus=RLOC_00001312
ChrX	stalkie_big_nohaplotig	exon	22071136	22071445	90	-	.	Parent=comp6994_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	22071138	22071248	.	-	0	Parent=comp6994_c0_seq1.mrna1
ChrX	gffcl	locus	22143891	22146588	.	+	.	ID=RLOC_00001313;geneIDs=comp161231_c0_seq1.path1;transcripts=comp161231_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22143891	22146588	.	+	.	ID=comp161231_c0_seq1.mrna1;geneID=comp161231_c0_seq1.path1;Name=comp161231_c0_seq1;Dir=sensecoverage=96.0;identity=96.1;matches=1192;mismatches=19;indels=30;unknowns=0;locus=RLOC_00001313
ChrX	stalkie_big_nohaplotig	exon	22143891	22144068	100	+	.	Parent=comp161231_c0_seq1.mrna1;Target=comp161231_c0_seq1 51 228 +
ChrX	stalkie_big_nohaplotig	exon	22144550	22145220	94	+	.	Parent=comp161231_c0_seq1.mrna1;Target=comp161231_c0_seq1 229 928 +
ChrX	stalkie_big_nohaplotig	exon	22146172	22146335	96	+	.	Parent=comp161231_c0_seq1.mrna1;Target=comp161231_c0_seq1 929 1093 +
ChrX	stalkie_big_nohaplotig	exon	22146391	22146588	99	+	.	Parent=comp161231_c0_seq1.mrna1;Target=comp161231_c0_seq1 1094 1291 +
ChrX	stalkie_big_nohaplotig	CDS	22143976	22144068	.	+	0	Parent=comp161231_c0_seq1.mrna1;Target=comp161231_c0_seq1 136 228 +
ChrX	stalkie_big_nohaplotig	CDS	22144550	22144675	.	+	0	Parent=comp161231_c0_seq1.mrna1;Target=comp161231_c0_seq1 229 354 +
ChrX	gffcl	locus	22298458	22299255	.	-	.	ID=RLOC_00001314;geneIDs=Dp_FBgn0077676.path1;transcripts=Dp_FBgn0077676.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22298458	22299255	.	-	.	ID=Dp_FBgn0077676.mrna1;geneID=Dp_FBgn0077676.path1;Name=Dp_FBgn0077676;Dir=indeterminatecoverage=100.0;identity=99.4;matches=793;mismatches=5;indels=0;unknowns=0;Target=Dp_FBgn0077676 798 1 .;locus=RLOC_00001314
ChrX	stalkie_big_nohaplotig	exon	22298458	22299255	99	-	.	Parent=Dp_FBgn0077676.mrna1
ChrX	stalkie_big_nohaplotig	CDS	22298458	22299255	.	-	0	Parent=Dp_FBgn0077676.mrna1
ChrX	gffcl	locus	22321701	22322078	.	+	.	ID=RLOC_00001315;geneIDs=comp1381825_c0_seq1.path1;transcripts=comp1381825_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22321701	22322078	.	+	.	ID=comp1381825_c0_seq1.mrna1;geneID=comp1381825_c0_seq1.path1;Name=comp1381825_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.1;matches=371;mismatches=7;indels=0;unknowns=0;Target=comp1381825_c0_seq1 378 1 .;CDS_Target=comp1381825_c0_seq1 293 3 .;locus=RLOC_00001315
ChrX	stalkie_big_nohaplotig	exon	22321701	22322078	98	+	.	Parent=comp1381825_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	22321703	22321993	.	+	0	Parent=comp1381825_c0_seq1.mrna1
ChrX	gffcl	locus	22362716	22364369	.	-	.	ID=RLOC_00001316;geneIDs=comp157453_c0_seq1.path1;transcripts=comp157453_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22362716	22364369	.	-	.	ID=comp157453_c0_seq1.mrna1;geneID=comp157453_c0_seq1.path1;Name=comp157453_c0_seq1;Dir=sensecoverage=100.0;identity=98.9;matches=1400;mismatches=15;indels=1;unknowns=0;locus=RLOC_00001316
ChrX	stalkie_big_nohaplotig	exon	22362716	22363437	99	-	.	Parent=comp157453_c0_seq1.mrna1;Target=comp157453_c0_seq1 694 1416 +
ChrX	stalkie_big_nohaplotig	exon	22363502	22363626	100	-	.	Parent=comp157453_c0_seq1.mrna1;Target=comp157453_c0_seq1 569 693 +
ChrX	stalkie_big_nohaplotig	exon	22363683	22363824	95	-	.	Parent=comp157453_c0_seq1.mrna1;Target=comp157453_c0_seq1 427 568 +
ChrX	stalkie_big_nohaplotig	exon	22363878	22364106	99	-	.	Parent=comp157453_c0_seq1.mrna1;Target=comp157453_c0_seq1 198 426 +
ChrX	stalkie_big_nohaplotig	exon	22364173	22364369	100	-	.	Parent=comp157453_c0_seq1.mrna1;Target=comp157453_c0_seq1 1 197 +
ChrX	stalkie_big_nohaplotig	CDS	22364002	22364106	.	-	0	Parent=comp157453_c0_seq1.mrna1;Target=comp157453_c0_seq1 198 302 +
ChrX	stalkie_big_nohaplotig	CDS	22364173	22364265	.	-	0	Parent=comp157453_c0_seq1.mrna1;Target=comp157453_c0_seq1 105 197 +
ChrX	gffcl	locus	22400888	22401898	.	-	.	ID=RLOC_00001317;geneIDs=ORF1733.path1;transcripts=ORF1733.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22400888	22401898	.	-	.	ID=ORF1733.mrna1;geneID=ORF1733.path1;Name=ORF1733;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1007;mismatches=4;indels=0;unknowns=0;Target=ORF1733 1011 1 .;locus=RLOC_00001317
ChrX	stalkie_big_nohaplotig	exon	22400888	22401898	99	-	.	Parent=ORF1733.mrna1
ChrX	stalkie_big_nohaplotig	CDS	22400888	22401898	.	-	0	Parent=ORF1733.mrna1
ChrX	gffcl	locus	22441748	22458102	.	+	.	ID=RLOC_00001318;geneIDs=comp156068_c3_seq1.path1;transcripts=comp156068_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22441748	22458102	.	+	.	ID=comp156068_c3_seq1.mrna1;geneID=comp156068_c3_seq1.path1;Name=comp156068_c3_seq1;Dir=antisensecoverage=99.9;identity=98.4;matches=1511;mismatches=13;indels=11;unknowns=0;locus=RLOC_00001318
ChrX	stalkie_big_nohaplotig	exon	22441748	22442179	95	+	.	Parent=comp156068_c3_seq1.mrna1;Target=comp156068_c3_seq1 1096 1534 -
ChrX	stalkie_big_nohaplotig	exon	22449945	22450036	100	+	.	Parent=comp156068_c3_seq1.mrna1;Target=comp156068_c3_seq1 1004 1095 -
ChrX	stalkie_big_nohaplotig	exon	22450650	22450724	96	+	.	Parent=comp156068_c3_seq1.mrna1;Target=comp156068_c3_seq1 929 1003 -
ChrX	stalkie_big_nohaplotig	exon	22450841	22450923	100	+	.	Parent=comp156068_c3_seq1.mrna1;Target=comp156068_c3_seq1 846 928 -
ChrX	stalkie_big_nohaplotig	exon	22457127	22457253	100	+	.	Parent=comp156068_c3_seq1.mrna1;Target=comp156068_c3_seq1 719 845 -
ChrX	stalkie_big_nohaplotig	exon	22457386	22458102	99	+	.	Parent=comp156068_c3_seq1.mrna1;Target=comp156068_c3_seq1 2 718 -
ChrX	stalkie_big_nohaplotig	CDS	22457152	22457253	.	+	0	Parent=comp156068_c3_seq1.mrna1;Target=comp156068_c3_seq1 719 820 .
ChrX	stalkie_big_nohaplotig	CDS	22457386	22457958	.	+	0	Parent=comp156068_c3_seq1.mrna1;Target=comp156068_c3_seq1 146 718 .
ChrX	gffcl	locus	22443765	22445527	.	-	.	ID=RLOC_00001319;geneIDs=comp139315_c0_seq1.path1,comp154862_c0_seq1.path1;transcripts=comp154862_c0_seq1.mrna1,comp139315_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22443765	22445046	.	-	.	ID=comp154862_c0_seq1.mrna1;geneID=comp154862_c0_seq1.path1;Name=comp154862_c0_seq1;Dir=antisensecoverage=100.0;identity=99.0;matches=1174;mismatches=11;indels=1;unknowns=0;Target=comp154862_c0_seq1 176 895 .;locus=RLOC_00001319
ChrX	stalkie_big_nohaplotig	exon	22443765	22444698	99	-	.	Parent=comp154862_c0_seq1.mrna1;Target=comp154862_c0_seq1 1 934 -
ChrX	stalkie_big_nohaplotig	exon	22444796	22445046	95	-	.	Parent=comp154862_c0_seq1.mrna1;Target=comp154862_c0_seq1 935 1186 -
ChrX	stalkie_big_nohaplotig	CDS	22443940	22444659	.	-	0	Parent=comp154862_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22444959	22445527	.	-	.	ID=comp139315_c0_seq1.mrna1;geneID=comp139315_c0_seq1.path1;Name=comp139315_c0_seq1;Dir=indeterminatecoverage=99.8;identity=95.5;matches=463;mismatches=9;indels=13;unknowns=0;Target=comp139315_c0_seq1 271 110 .;locus=RLOC_00001319
ChrX	stalkie_big_nohaplotig	exon	22444959	22445089	96	-	.	Parent=comp139315_c0_seq1.mrna1;Target=comp139315_c0_seq1 473 343 .
ChrX	stalkie_big_nohaplotig	exon	22445174	22445527	94	-	.	Parent=comp139315_c0_seq1.mrna1;Target=comp139315_c0_seq1 342 2 .
ChrX	stalkie_big_nohaplotig	CDS	22445245	22445419	.	-	0	Parent=comp139315_c0_seq1.mrna1
ChrX	gffcl	locus	22476968	22480881	.	-	.	ID=RLOC_00001320;geneIDs=ORF540.path1;transcripts=ORF540.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22476968	22480881	.	-	.	ID=ORF540.mrna1;geneID=ORF540.path1;Name=ORF540;Dir=sensecoverage=100.0;identity=99.8;matches=1668;mismatches=3;indels=0;unknowns=0;locus=RLOC_00001320
ChrX	stalkie_big_nohaplotig	exon	22476968	22477073	100	-	.	Parent=ORF540.mrna1;Target=ORF540 1566 1671 +
ChrX	stalkie_big_nohaplotig	exon	22477128	22477327	100	-	.	Parent=ORF540.mrna1;Target=ORF540 1366 1565 +
ChrX	stalkie_big_nohaplotig	exon	22477406	22478718	99	-	.	Parent=ORF540.mrna1;Target=ORF540 53 1365 +
ChrX	stalkie_big_nohaplotig	exon	22480830	22480881	100	-	.	Parent=ORF540.mrna1;Target=ORF540 1 52 +
ChrX	stalkie_big_nohaplotig	CDS	22476968	22477073	.	-	1	Parent=ORF540.mrna1;Target=ORF540 1566 1671 +
ChrX	stalkie_big_nohaplotig	CDS	22477128	22477327	.	-	0	Parent=ORF540.mrna1;Target=ORF540 1366 1565 +
ChrX	stalkie_big_nohaplotig	CDS	22477406	22478718	.	-	2	Parent=ORF540.mrna1;Target=ORF540 53 1365 +
ChrX	stalkie_big_nohaplotig	CDS	22480830	22480881	.	-	0	Parent=ORF540.mrna1;Target=ORF540 1 52 +
ChrX	gffcl	locus	22541088	22543285	.	-	.	ID=RLOC_00001322;geneIDs=comp146853_c0_seq1.path1;transcripts=comp146853_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22541088	22543285	.	-	.	ID=comp146853_c0_seq1.mrna1;geneID=comp146853_c0_seq1.path1;Name=comp146853_c0_seq1;Dir=antisensecoverage=97.4;identity=99.3;matches=715;mismatches=4;indels=1;unknowns=0;locus=RLOC_00001322
ChrX	stalkie_big_nohaplotig	exon	22541088	22541414	99	-	.	Parent=comp146853_c0_seq1.mrna1;Target=comp146853_c0_seq1 1 326 -
ChrX	stalkie_big_nohaplotig	exon	22542808	22543008	99	-	.	Parent=comp146853_c0_seq1.mrna1;Target=comp146853_c0_seq1 327 527 -
ChrX	stalkie_big_nohaplotig	exon	22543094	22543285	98	-	.	Parent=comp146853_c0_seq1.mrna1;Target=comp146853_c0_seq1 528 719 -
ChrX	stalkie_big_nohaplotig	CDS	22541313	22541414	.	-	0	Parent=comp146853_c0_seq1.mrna1;Target=comp146853_c0_seq1 225 326 .
ChrX	stalkie_big_nohaplotig	CDS	22542808	22543008	.	-	0	Parent=comp146853_c0_seq1.mrna1;Target=comp146853_c0_seq1 327 527 .
ChrX	stalkie_big_nohaplotig	CDS	22543094	22543183	.	-	0	Parent=comp146853_c0_seq1.mrna1;Target=comp146853_c0_seq1 528 617 .
ChrX	gffcl	locus	22549706	22550679	.	-	.	ID=RLOC_00001323;geneIDs=ORF1868.path1;transcripts=ORF1868.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22549706	22550679	.	-	.	ID=ORF1868.mrna1;geneID=ORF1868.path1;Name=ORF1868;Dir=indeterminatecoverage=99.9;identity=100.0;matches=974;mismatches=0;indels=0;unknowns=0;Target=ORF1868 975 2 .;CDS_Target=ORF1868 975 4 .;locus=RLOC_00001323
ChrX	stalkie_big_nohaplotig	exon	22549706	22550679	100	-	.	Parent=ORF1868.mrna1
ChrX	stalkie_big_nohaplotig	CDS	22549706	22550677	.	-	0	Parent=ORF1868.mrna1
ChrX	gffcl	locus	22551735	22552347	.	-	.	ID=RLOC_00001324;geneIDs=comp151508_c0_seq1.path1;transcripts=comp151508_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22551735	22552347	.	-	.	ID=comp151508_c0_seq1.mrna1;geneID=comp151508_c0_seq1.path1;Name=comp151508_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=553;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001324
ChrX	stalkie_big_nohaplotig	exon	22551735	22552210	99	-	.	Parent=comp151508_c0_seq1.mrna1;Target=comp151508_c0_seq1 1 476 -
ChrX	stalkie_big_nohaplotig	exon	22552270	22552347	100	-	.	Parent=comp151508_c0_seq1.mrna1;Target=comp151508_c0_seq1 477 554 -
ChrX	stalkie_big_nohaplotig	CDS	22552134	22552210	.	-	2	Parent=comp151508_c0_seq1.mrna1;Target=comp151508_c0_seq1 400 476 .
ChrX	stalkie_big_nohaplotig	CDS	22552270	22552345	.	-	0	Parent=comp151508_c0_seq1.mrna1;Target=comp151508_c0_seq1 477 552 .
ChrX	gffcl	locus	22554820	22556173	.	+	.	ID=RLOC_00001325;geneIDs=FBgn0031344.1.path1;transcripts=FBgn0031344.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22554820	22556173	.	+	.	ID=FBgn0031344.1.mrna1;geneID=FBgn0031344.1.path1;Name=FBgn0031344.1;Dir=sensecoverage=100.0;identity=100.0;matches=1125;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001325
ChrX	stalkie_big_nohaplotig	exon	22554820	22554837	100	+	.	Parent=FBgn0031344.1.mrna1;Target=FBgn0031344.1 1 18 +
ChrX	stalkie_big_nohaplotig	exon	22554920	22555171	100	+	.	Parent=FBgn0031344.1.mrna1;Target=FBgn0031344.1 19 270 +
ChrX	stalkie_big_nohaplotig	exon	22555242	22556008	100	+	.	Parent=FBgn0031344.1.mrna1;Target=FBgn0031344.1 271 1037 +
ChrX	stalkie_big_nohaplotig	exon	22556086	22556173	100	+	.	Parent=FBgn0031344.1.mrna1;Target=FBgn0031344.1 1038 1125 +
ChrX	stalkie_big_nohaplotig	CDS	22554820	22554837	.	+	0	Parent=FBgn0031344.1.mrna1;Target=FBgn0031344.1 1 18 +
ChrX	stalkie_big_nohaplotig	CDS	22554920	22555171	.	+	0	Parent=FBgn0031344.1.mrna1;Target=FBgn0031344.1 19 270 +
ChrX	stalkie_big_nohaplotig	CDS	22555242	22556008	.	+	0	Parent=FBgn0031344.1.mrna1;Target=FBgn0031344.1 271 1037 +
ChrX	stalkie_big_nohaplotig	CDS	22556086	22556173	.	+	1	Parent=FBgn0031344.1.mrna1;Target=FBgn0031344.1 1038 1125 +
ChrX	gffcl	locus	22563494	22566783	.	+	.	ID=RLOC_00001326;geneIDs=ORF76.path1;transcripts=ORF76.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22563494	22566783	.	+	.	ID=ORF76.mrna1;geneID=ORF76.path1;Name=ORF76;Dir=sensecoverage=100.0;identity=99.9;matches=3226;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001326
ChrX	stalkie_big_nohaplotig	exon	22563494	22564952	99	+	.	Parent=ORF76.mrna1;Target=ORF76 1 1459 +
ChrX	stalkie_big_nohaplotig	exon	22565015	22566783	99	+	.	Parent=ORF76.mrna1;Target=ORF76 1460 3228 +
ChrX	stalkie_big_nohaplotig	CDS	22563494	22564952	.	+	0	Parent=ORF76.mrna1;Target=ORF76 1 1459 +
ChrX	stalkie_big_nohaplotig	CDS	22565015	22566783	.	+	2	Parent=ORF76.mrna1;Target=ORF76 1460 3228 +
ChrX	gffcl	locus	22567227	22567471	.	-	.	ID=RLOC_00001327;geneIDs=comp148671_c0_seq1.path1;transcripts=comp148671_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22567227	22567471	.	-	.	ID=comp148671_c0_seq1.mrna1;geneID=comp148671_c0_seq1.path1;Name=comp148671_c0_seq1;Dir=indeterminatecoverage=85.8;identity=90.2;matches=221;mismatches=21;indels=3;unknowns=0;Target=comp148671_c0_seq1 282 41 .;CDS_Target=comp148671_c0_seq1 163 125 .;locus=RLOC_00001327
ChrX	stalkie_big_nohaplotig	exon	22567227	22567471	90	-	.	Parent=comp148671_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	22567346	22567384	.	-	0	Parent=comp148671_c0_seq1.mrna1
ChrX	gffcl	locus	22574700	22576160	.	+	.	ID=RLOC_00001329;geneIDs=comp148640_c0_seq1.path1;transcripts=comp148640_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22574700	22576160	.	+	.	ID=comp148640_c0_seq1.mrna1;geneID=comp148640_c0_seq1.path1;Name=comp148640_c0_seq1;Dir=antisensecoverage=99.3;identity=98.5;matches=745;mismatches=3;indels=8;unknowns=0;locus=RLOC_00001329
ChrX	stalkie_big_nohaplotig	exon	22574700	22574859	99	+	.	Parent=comp148640_c0_seq1.mrna1;Target=comp148640_c0_seq1 600 759 -
ChrX	stalkie_big_nohaplotig	exon	22575446	22575578	93	+	.	Parent=comp148640_c0_seq1.mrna1;Target=comp148640_c0_seq1 461 599 -
ChrX	stalkie_big_nohaplotig	exon	22575650	22576002	100	+	.	Parent=comp148640_c0_seq1.mrna1;Target=comp148640_c0_seq1 108 460 -
ChrX	stalkie_big_nohaplotig	exon	22576058	22576160	99	+	.	Parent=comp148640_c0_seq1.mrna1;Target=comp148640_c0_seq1 5 107 -
ChrX	stalkie_big_nohaplotig	CDS	22575515	22575578	.	+	0	Parent=comp148640_c0_seq1.mrna1;Target=comp148640_c0_seq1 461 524 .
ChrX	stalkie_big_nohaplotig	CDS	22575650	22576002	.	+	2	Parent=comp148640_c0_seq1.mrna1;Target=comp148640_c0_seq1 108 460 .
ChrX	stalkie_big_nohaplotig	CDS	22576058	22576108	.	+	0	Parent=comp148640_c0_seq1.mrna1;Target=comp148640_c0_seq1 57 107 .
ChrX	gffcl	locus	22577401	22578543	.	-	.	ID=RLOC_00001330;geneIDs=FBgn0032049.4.path1;transcripts=FBgn0032049.4.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22577401	22578543	.	-	.	ID=FBgn0032049.4.mrna1;geneID=FBgn0032049.4.path1;Name=FBgn0032049.4;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1143;mismatches=0;indels=0;unknowns=0;Target=FBgn0032049.4 1143 1 .;locus=RLOC_00001330
ChrX	stalkie_big_nohaplotig	exon	22577401	22578543	100	-	.	Parent=FBgn0032049.4.mrna1
ChrX	stalkie_big_nohaplotig	CDS	22577401	22578543	.	-	0	Parent=FBgn0032049.4.mrna1
ChrX	gffcl	locus	22582204	22582256	.	-	.	ID=RLOC_00001331;geneIDs=comp85678_c0_seq1.path2;transcripts=comp85678_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	22582204	22582256	.	-	.	ID=comp85678_c0_seq1.mrna2;geneID=comp85678_c0_seq1.path2;Name=comp85678_c0_seq1;Dir=indeterminatecoverage=12.3;identity=98.1;matches=52;mismatches=1;indels=0;unknowns=0;Target=comp85678_c0_seq1 428 376 .;locus=RLOC_00001331
ChrX	stalkie_big_nohaplotig	exon	22582204	22582256	98	-	.	Parent=comp85678_c0_seq1.mrna2
ChrX	gffcl	locus	22592700	22593197	.	-	.	ID=RLOC_00001332;geneIDs=comp150512_c0_seq1.path1;transcripts=comp150512_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22592700	22593197	.	-	.	ID=comp150512_c0_seq1.mrna1;geneID=comp150512_c0_seq1.path1;Name=comp150512_c0_seq1;Dir=indeterminatecoverage=97.7;identity=97.4;matches=486;mismatches=12;indels=1;unknowns=0;Target=comp150512_c0_seq1 499 1 .;CDS_Target=comp150512_c0_seq1 97 2 .;locus=RLOC_00001332
ChrX	stalkie_big_nohaplotig	exon	22592700	22593197	97	-	.	Parent=comp150512_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	22593101	22593196	.	-	0	Parent=comp150512_c0_seq1.mrna1
ChrX	gffcl	locus	22695181	22696080	.	-	.	ID=RLOC_00001335;geneIDs=comp146508_c0_seq1.path1;transcripts=comp146508_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22695181	22696080	.	-	.	ID=comp146508_c0_seq1.mrna1;geneID=comp146508_c0_seq1.path1;Name=comp146508_c0_seq1;Dir=antisensecoverage=97.4;identity=99.7;matches=681;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001335
ChrX	stalkie_big_nohaplotig	exon	22695181	22695396	100	-	.	Parent=comp146508_c0_seq1.mrna1;Target=comp146508_c0_seq1 2 217 -
ChrX	stalkie_big_nohaplotig	exon	22695614	22696080	99	-	.	Parent=comp146508_c0_seq1.mrna1;Target=comp146508_c0_seq1 218 684 -
ChrX	stalkie_big_nohaplotig	CDS	22695259	22695396	.	-	0	Parent=comp146508_c0_seq1.mrna1;Target=comp146508_c0_seq1 80 217 .
ChrX	stalkie_big_nohaplotig	CDS	22695614	22695667	.	-	0	Parent=comp146508_c0_seq1.mrna1;Target=comp146508_c0_seq1 218 271 .
ChrX	gffcl	locus	22697142	22698084	.	-	.	ID=RLOC_00001336;geneIDs=comp148308_c0_seq1.path1;transcripts=comp148308_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22697142	22698084	.	-	.	ID=comp148308_c0_seq1.mrna1;geneID=comp148308_c0_seq1.path1;Name=comp148308_c0_seq1;Dir=sensecoverage=99.8;identity=99.9;matches=885;mismatches=1;indels=0;unknowns=0;Target=comp148308_c0_seq1 136 240 +;locus=RLOC_00001336
ChrX	stalkie_big_nohaplotig	exon	22697142	22697502	100	-	.	Parent=comp148308_c0_seq1.mrna1;Target=comp148308_c0_seq1 527 887 +
ChrX	stalkie_big_nohaplotig	exon	22697560	22698084	99	-	.	Parent=comp148308_c0_seq1.mrna1;Target=comp148308_c0_seq1 2 526 +
ChrX	stalkie_big_nohaplotig	CDS	22697846	22697950	.	-	0	Parent=comp148308_c0_seq1.mrna1
ChrX	gffcl	locus	22714106	24518536	.	-	.	ID=RLOC_00001337;geneIDs=ORF801.path1,comp151312_c1_seq1.path1;transcripts=ORF801.mrna1,comp151312_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22714106	22716135	.	-	.	ID=ORF801.mrna1;geneID=ORF801.path1;Name=ORF801;Dir=sensecoverage=100.0;identity=99.1;matches=1409;mismatches=12;indels=1;unknowns=0;Target=ORF801 3 50 +;locus=RLOC_00001337
ChrX	stalkie_big_nohaplotig	exon	22714106	22714917	98	-	.	Parent=ORF801.mrna1;Target=ORF801 611 1422 +
ChrX	stalkie_big_nohaplotig	exon	22714977	22715103	100	-	.	Parent=ORF801.mrna1;Target=ORF801 484 610 +
ChrX	stalkie_big_nohaplotig	exon	22715654	22716135	99	-	.	Parent=ORF801.mrna1;Target=ORF801 1 483 +
ChrX	stalkie_big_nohaplotig	CDS	22716087	22716133	.	-	0	Parent=ORF801.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22714784	24518536	.	-	.	ID=comp151312_c1_seq1.mrna1;geneID=comp151312_c1_seq1.path1;Name=comp151312_c1_seq1;Dir=indeterminatecoverage=50.4;identity=96.4;matches=563;mismatches=20;indels=1;unknowns=0;locus=RLOC_00001337
ChrX	stalkie_big_nohaplotig	exon	22714784	22714790	85	-	.	Parent=comp151312_c1_seq1.mrna1;Target=comp151312_c1_seq1 585 579 .
ChrX	stalkie_big_nohaplotig	exon	22717108	22717110	66	-	.	Parent=comp151312_c1_seq1.mrna1;Target=comp151312_c1_seq1 578 576 .
ChrX	stalkie_big_nohaplotig	exon	22719018	22719026	100	-	.	Parent=comp151312_c1_seq1.mrna1;Target=comp151312_c1_seq1 575 567 .
ChrX	stalkie_big_nohaplotig	exon	24514114	24514602	97	-	.	Parent=comp151312_c1_seq1.mrna1;Target=comp151312_c1_seq1 565 76 .
ChrX	stalkie_big_nohaplotig	exon	24518462	24518536	90	-	.	Parent=comp151312_c1_seq1.mrna1;Target=comp151312_c1_seq1 75 1 .
ChrX	stalkie_big_nohaplotig	CDS	24514585	24514602	.	-	0	Parent=comp151312_c1_seq1.mrna1;Target=comp151312_c1_seq1 93 76 .
ChrX	stalkie_big_nohaplotig	CDS	24518462	24518536	.	-	0	Parent=comp151312_c1_seq1.mrna1;Target=comp151312_c1_seq1 75 1 .
ChrX	gffcl	locus	22723661	22724052	.	-	.	ID=RLOC_00001338;geneIDs=comp153494_c0_seq1.path1;transcripts=comp153494_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22723661	22724052	.	-	.	ID=comp153494_c0_seq1.mrna1;geneID=comp153494_c0_seq1.path1;Name=comp153494_c0_seq1;Dir=indeterminatecoverage=89.2;identity=99.2;matches=392;mismatches=0;indels=3;unknowns=0;Target=comp153494_c0_seq1 443 49 .;CDS_Target=comp153494_c0_seq1 160 77 .;locus=RLOC_00001338
ChrX	stalkie_big_nohaplotig	exon	22723661	22724052	99	-	.	Parent=comp153494_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	22723944	22724024	.	-	0	Parent=comp153494_c0_seq1.mrna1
ChrX	gffcl	locus	22725589	22725960	.	-	.	ID=RLOC_00001339;geneIDs=comp137304_c0_seq1.path1;transcripts=comp137304_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22725589	22725960	.	-	.	ID=comp137304_c0_seq1.mrna1;geneID=comp137304_c0_seq1.path1;Name=comp137304_c0_seq1;Dir=indeterminatecoverage=96.9;identity=98.9;matches=369;mismatches=3;indels=1;unknowns=0;Target=comp137304_c0_seq1 373 1 .;CDS_Target=comp137304_c0_seq1 111 1 .;locus=RLOC_00001339
ChrX	stalkie_big_nohaplotig	exon	22725589	22725960	98	-	.	Parent=comp137304_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	22725850	22725960	.	-	0	Parent=comp137304_c0_seq1.mrna1
ChrX	gffcl	locus	22726439	22726831	.	-	.	ID=RLOC_00001340;geneIDs=comp116471_c0_seq1.path1;transcripts=comp116471_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22726439	22726831	.	-	.	ID=comp116471_c0_seq1.mrna1;geneID=comp116471_c0_seq1.path1;Name=comp116471_c0_seq1;Dir=indeterminatecoverage=100.0;identity=87.4;matches=376;mismatches=16;indels=38;unknowns=0;Target=comp116471_c0_seq1 429 1 .;CDS_Target=comp116471_c0_seq1 228 1 .;locus=RLOC_00001340
ChrX	stalkie_big_nohaplotig	exon	22726439	22726831	87	-	.	Parent=comp116471_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	22726639	22726831	.	-	0	Parent=comp116471_c0_seq1.mrna1
ChrX	gffcl	locus	22731640	22746021	.	-	.	ID=RLOC_00001341;geneIDs=FBgn0031275.path1;transcripts=FBgn0031275.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22731640	22746021	.	-	.	ID=FBgn0031275.mrna1;geneID=FBgn0031275.path1;Name=FBgn0031275;Dir=sensecoverage=100.0;identity=99.7;matches=1370;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001341
ChrX	stalkie_big_nohaplotig	exon	22731640	22731717	100	-	.	Parent=FBgn0031275.mrna1;Target=FBgn0031275 1297 1374 +
ChrX	stalkie_big_nohaplotig	exon	22731858	22732096	98	-	.	Parent=FBgn0031275.mrna1;Target=FBgn0031275 1058 1296 +
ChrX	stalkie_big_nohaplotig	exon	22734072	22734390	100	-	.	Parent=FBgn0031275.mrna1;Target=FBgn0031275 739 1057 +
ChrX	stalkie_big_nohaplotig	exon	22737475	22737750	99	-	.	Parent=FBgn0031275.mrna1;Target=FBgn0031275 463 738 +
ChrX	stalkie_big_nohaplotig	exon	22740635	22740773	100	-	.	Parent=FBgn0031275.mrna1;Target=FBgn0031275 324 462 +
ChrX	stalkie_big_nohaplotig	exon	22742885	22743186	100	-	.	Parent=FBgn0031275.mrna1;Target=FBgn0031275 22 323 +
ChrX	stalkie_big_nohaplotig	exon	22746001	22746021	100	-	.	Parent=FBgn0031275.mrna1;Target=FBgn0031275 1 21 +
ChrX	stalkie_big_nohaplotig	CDS	22731640	22731717	.	-	0	Parent=FBgn0031275.mrna1;Target=FBgn0031275 1297 1374 +
ChrX	stalkie_big_nohaplotig	CDS	22731858	22732096	.	-	2	Parent=FBgn0031275.mrna1;Target=FBgn0031275 1058 1296 +
ChrX	stalkie_big_nohaplotig	CDS	22734072	22734390	.	-	0	Parent=FBgn0031275.mrna1;Target=FBgn0031275 739 1057 +
ChrX	stalkie_big_nohaplotig	CDS	22737475	22737750	.	-	0	Parent=FBgn0031275.mrna1;Target=FBgn0031275 463 738 +
ChrX	stalkie_big_nohaplotig	CDS	22740635	22740773	.	-	1	Parent=FBgn0031275.mrna1;Target=FBgn0031275 324 462 +
ChrX	stalkie_big_nohaplotig	CDS	22742885	22743186	.	-	0	Parent=FBgn0031275.mrna1;Target=FBgn0031275 22 323 +
ChrX	stalkie_big_nohaplotig	CDS	22746001	22746021	.	-	0	Parent=FBgn0031275.mrna1;Target=FBgn0031275 1 21 +
ChrX	gffcl	locus	22818962	22823075	.	+	.	ID=RLOC_00001342;geneIDs=comp152809_c0_seq1.path1;transcripts=comp152809_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22818962	22823075	.	+	.	ID=comp152809_c0_seq1.mrna1;geneID=comp152809_c0_seq1.path1;Name=comp152809_c0_seq1;Dir=antisensecoverage=99.8;identity=99.7;matches=594;mismatches=2;indels=0;unknowns=0;Target=comp152809_c0_seq1 437 595 .;locus=RLOC_00001342
ChrX	stalkie_big_nohaplotig	exon	22818962	22819271	100	+	.	Parent=comp152809_c0_seq1.mrna1;Target=comp152809_c0_seq1 288 597 -
ChrX	stalkie_big_nohaplotig	exon	22822790	22823075	99	+	.	Parent=comp152809_c0_seq1.mrna1;Target=comp152809_c0_seq1 2 287 -
ChrX	stalkie_big_nohaplotig	CDS	22818964	22819122	.	+	0	Parent=comp152809_c0_seq1.mrna1
ChrX	gffcl	locus	22834294	22835514	.	+	.	ID=RLOC_00001343;geneIDs=comp141235_c0_seq1.path1;transcripts=comp141235_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22834294	22835514	.	+	.	ID=comp141235_c0_seq1.mrna1;geneID=comp141235_c0_seq1.path1;Name=comp141235_c0_seq1;Dir=antisensecoverage=99.9;identity=99.9;matches=1045;mismatches=1;indels=0;unknowns=0;Target=comp141235_c0_seq1 936 1046 .;locus=RLOC_00001343
ChrX	stalkie_big_nohaplotig	exon	22834294	22834759	99	+	.	Parent=comp141235_c0_seq1.mrna1;Target=comp141235_c0_seq1 581 1046 -
ChrX	stalkie_big_nohaplotig	exon	22834935	22835514	100	+	.	Parent=comp141235_c0_seq1.mrna1;Target=comp141235_c0_seq1 1 580 -
ChrX	stalkie_big_nohaplotig	CDS	22834294	22834404	.	+	0	Parent=comp141235_c0_seq1.mrna1
ChrX	gffcl	locus	22835968	22842616	.	+	.	ID=RLOC_00001344;geneIDs=FBgn0026438.1.path1,comp161990_c1_seq1.path1;transcripts=FBgn0026438.1.mrna1,comp161990_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22835968	22842234	.	+	.	ID=FBgn0026438.1.mrna1;geneID=FBgn0026438.1.path1;Name=FBgn0026438.1;Dir=sensecoverage=100.0;identity=99.9;matches=1778;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001344
ChrX	stalkie_big_nohaplotig	exon	22835968	22836238	100	+	.	Parent=FBgn0026438.1.mrna1;Target=FBgn0026438.1 1 271 +
ChrX	stalkie_big_nohaplotig	exon	22838013	22838346	100	+	.	Parent=FBgn0026438.1.mrna1;Target=FBgn0026438.1 272 605 +
ChrX	stalkie_big_nohaplotig	exon	22838776	22839354	100	+	.	Parent=FBgn0026438.1.mrna1;Target=FBgn0026438.1 606 1184 +
ChrX	stalkie_big_nohaplotig	exon	22839953	22840282	100	+	.	Parent=FBgn0026438.1.mrna1;Target=FBgn0026438.1 1185 1514 +
ChrX	stalkie_big_nohaplotig	exon	22841554	22841665	99	+	.	Parent=FBgn0026438.1.mrna1;Target=FBgn0026438.1 1515 1626 +
ChrX	stalkie_big_nohaplotig	exon	22842082	22842234	100	+	.	Parent=FBgn0026438.1.mrna1;Target=FBgn0026438.1 1627 1779 +
ChrX	stalkie_big_nohaplotig	CDS	22835968	22836238	.	+	0	Parent=FBgn0026438.1.mrna1;Target=FBgn0026438.1 1 271 +
ChrX	stalkie_big_nohaplotig	CDS	22838013	22838346	.	+	2	Parent=FBgn0026438.1.mrna1;Target=FBgn0026438.1 272 605 +
ChrX	stalkie_big_nohaplotig	CDS	22838776	22839354	.	+	1	Parent=FBgn0026438.1.mrna1;Target=FBgn0026438.1 606 1184 +
ChrX	stalkie_big_nohaplotig	CDS	22839953	22840282	.	+	1	Parent=FBgn0026438.1.mrna1;Target=FBgn0026438.1 1185 1514 +
ChrX	stalkie_big_nohaplotig	CDS	22841554	22841665	.	+	1	Parent=FBgn0026438.1.mrna1;Target=FBgn0026438.1 1515 1626 +
ChrX	stalkie_big_nohaplotig	CDS	22842082	22842234	.	+	0	Parent=FBgn0026438.1.mrna1;Target=FBgn0026438.1 1627 1779 +
ChrX	stalkie_big_nohaplotig	mRNA	22836053	22842616	.	+	.	ID=comp161990_c1_seq1.mrna1;geneID=comp161990_c1_seq1.path1;Name=comp161990_c1_seq1;Dir=antisensecoverage=69.6;identity=99.7;matches=2484;mismatches=6;indels=2;unknowns=0;locus=RLOC_00001344
ChrX	stalkie_big_nohaplotig	exon	22836053	22836238	100	+	.	Parent=comp161990_c1_seq1.mrna1;Target=comp161990_c1_seq1 2774 2959 -
ChrX	stalkie_big_nohaplotig	exon	22838013	22838346	100	+	.	Parent=comp161990_c1_seq1.mrna1;Target=comp161990_c1_seq1 2440 2773 -
ChrX	stalkie_big_nohaplotig	exon	22838776	22839354	100	+	.	Parent=comp161990_c1_seq1.mrna1;Target=comp161990_c1_seq1 1861 2439 -
ChrX	stalkie_big_nohaplotig	exon	22839953	22840282	100	+	.	Parent=comp161990_c1_seq1.mrna1;Target=comp161990_c1_seq1 1531 1860 -
ChrX	stalkie_big_nohaplotig	exon	22841554	22842616	99	+	.	Parent=comp161990_c1_seq1.mrna1;Target=comp161990_c1_seq1 470 1530 -
ChrX	stalkie_big_nohaplotig	CDS	22836055	22836238	.	+	0	Parent=comp161990_c1_seq1.mrna1;Target=comp161990_c1_seq1 2774 2957 .
ChrX	stalkie_big_nohaplotig	CDS	22838013	22838346	.	+	2	Parent=comp161990_c1_seq1.mrna1;Target=comp161990_c1_seq1 2440 2773 .
ChrX	stalkie_big_nohaplotig	CDS	22838776	22839354	.	+	1	Parent=comp161990_c1_seq1.mrna1;Target=comp161990_c1_seq1 1861 2439 .
ChrX	stalkie_big_nohaplotig	CDS	22839953	22840282	.	+	1	Parent=comp161990_c1_seq1.mrna1;Target=comp161990_c1_seq1 1531 1860 .
ChrX	stalkie_big_nohaplotig	CDS	22841554	22841674	.	+	1	Parent=comp161990_c1_seq1.mrna1;Target=comp161990_c1_seq1 1410 1530 .
ChrX	gffcl	locus	22845921	22846298	.	-	.	ID=RLOC_00001345;geneIDs=comp137436_c0_seq1.path1;transcripts=comp137436_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22845921	22846298	.	-	.	ID=comp137436_c0_seq1.mrna1;geneID=comp137436_c0_seq1.path1;Name=comp137436_c0_seq1;Dir=indeterminatecoverage=98.1;identity=91.7;matches=377;mismatches=1;indels=33;unknowns=0;Target=comp137436_c0_seq1 411 1 .;CDS_Target=comp137436_c0_seq1 331 257 .;locus=RLOC_00001345
ChrX	stalkie_big_nohaplotig	exon	22845921	22846298	91	-	.	Parent=comp137436_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	22846001	22846075	.	-	0	Parent=comp137436_c0_seq1.mrna1
ChrX	gffcl	locus	22846396	22847104	.	+	.	ID=RLOC_00001346;geneIDs=comp150346_c0_seq1.path1;transcripts=comp150346_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22846396	22847104	.	+	.	ID=comp150346_c0_seq1.mrna1;geneID=comp150346_c0_seq1.path1;Name=comp150346_c0_seq1;Dir=indeterminatecoverage=97.8;identity=99.9;matches=708;mismatches=1;indels=0;unknowns=0;Target=comp150346_c0_seq1 710 2 .;CDS_Target=comp150346_c0_seq1 649 533 .;locus=RLOC_00001346
ChrX	stalkie_big_nohaplotig	exon	22846396	22847104	99	+	.	Parent=comp150346_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	22846927	22847043	.	+	0	Parent=comp150346_c0_seq1.mrna1
ChrX	gffcl	locus	22881835	22882844	.	+	.	ID=RLOC_00001347;geneIDs=ORF2243.path1;transcripts=ORF2243.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22881835	22882844	.	+	.	ID=ORF2243.mrna1;geneID=ORF2243.path1;Name=ORF2243;Dir=sensecoverage=99.1;identity=99.8;matches=881;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001347
ChrX	stalkie_big_nohaplotig	exon	22881835	22881938	100	+	.	Parent=ORF2243.mrna1;Target=ORF2243 9 112 +
ChrX	stalkie_big_nohaplotig	exon	22881998	22882261	99	+	.	Parent=ORF2243.mrna1;Target=ORF2243 113 376 +
ChrX	stalkie_big_nohaplotig	exon	22882330	22882844	99	+	.	Parent=ORF2243.mrna1;Target=ORF2243 377 891 +
ChrX	stalkie_big_nohaplotig	CDS	22881836	22881938	.	+	0	Parent=ORF2243.mrna1;Target=ORF2243 10 112 +
ChrX	stalkie_big_nohaplotig	CDS	22881998	22882261	.	+	2	Parent=ORF2243.mrna1;Target=ORF2243 113 376 +
ChrX	stalkie_big_nohaplotig	CDS	22882330	22882844	.	+	2	Parent=ORF2243.mrna1;Target=ORF2243 377 891 +
ChrX	gffcl	locus	22895275	22902745	.	+	.	ID=RLOC_00001348;geneIDs=comp134709_c0_seq1.path1;transcripts=comp134709_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22895275	22902745	.	+	.	ID=comp134709_c0_seq1.mrna1;geneID=comp134709_c0_seq1.path1;Name=comp134709_c0_seq1;Dir=sensecoverage=99.8;identity=98.7;matches=611;mismatches=8;indels=0;unknowns=0;locus=RLOC_00001348
ChrX	stalkie_big_nohaplotig	exon	22895275	22895429	96	+	.	Parent=comp134709_c0_seq1.mrna1;Target=comp134709_c0_seq1 1 155 +
ChrX	stalkie_big_nohaplotig	exon	22895544	22895788	100	+	.	Parent=comp134709_c0_seq1.mrna1;Target=comp134709_c0_seq1 156 400 +
ChrX	stalkie_big_nohaplotig	exon	22902527	22902745	99	+	.	Parent=comp134709_c0_seq1.mrna1;Target=comp134709_c0_seq1 401 619 +
ChrX	stalkie_big_nohaplotig	CDS	22895662	22895788	.	+	0	Parent=comp134709_c0_seq1.mrna1;Target=comp134709_c0_seq1 274 400 +
ChrX	stalkie_big_nohaplotig	CDS	22902527	22902642	.	+	2	Parent=comp134709_c0_seq1.mrna1;Target=comp134709_c0_seq1 401 516 +
ChrX	gffcl	locus	22900364	22901036	.	-	.	ID=RLOC_00001349;geneIDs=comp158481_c1_seq1.path1;transcripts=comp158481_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22900364	22901036	.	-	.	ID=comp158481_c1_seq1.mrna1;geneID=comp158481_c1_seq1.path1;Name=comp158481_c1_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=578;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001349
ChrX	stalkie_big_nohaplotig	exon	22900364	22900469	100	-	.	Parent=comp158481_c1_seq1.mrna1;Target=comp158481_c1_seq1 1 106 -
ChrX	stalkie_big_nohaplotig	exon	22900565	22901036	100	-	.	Parent=comp158481_c1_seq1.mrna1;Target=comp158481_c1_seq1 107 578 -
ChrX	stalkie_big_nohaplotig	CDS	22900366	22900469	.	-	2	Parent=comp158481_c1_seq1.mrna1;Target=comp158481_c1_seq1 3 106 .
ChrX	stalkie_big_nohaplotig	CDS	22900565	22901036	.	-	0	Parent=comp158481_c1_seq1.mrna1;Target=comp158481_c1_seq1 107 578 .
ChrX	gffcl	locus	22951679	22972622	.	-	.	ID=RLOC_00001350;geneIDs=comp150899_c0_seq1.path1;transcripts=comp150899_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	22951679	22972622	.	-	.	ID=comp150899_c0_seq1.mrna1;geneID=comp150899_c0_seq1.path1;Name=comp150899_c0_seq1;Dir=sensecoverage=100.0;identity=99.2;matches=520;mismatches=4;indels=0;unknowns=0;Target=comp150899_c0_seq1 360 452 +;locus=RLOC_00001350
ChrX	stalkie_big_nohaplotig	exon	22951679	22951956	99	-	.	Parent=comp150899_c0_seq1.mrna1;Target=comp150899_c0_seq1 247 524 +
ChrX	stalkie_big_nohaplotig	exon	22972377	22972622	99	-	.	Parent=comp150899_c0_seq1.mrna1;Target=comp150899_c0_seq1 1 246 +
ChrX	stalkie_big_nohaplotig	CDS	22951751	22951843	.	-	0	Parent=comp150899_c0_seq1.mrna1
ChrX	gffcl	locus	23054952	23056161	.	-	.	ID=RLOC_00001351;geneIDs=comp114568_c0_seq1.path1;transcripts=comp114568_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23054952	23056161	.	-	.	ID=comp114568_c0_seq1.mrna1;geneID=comp114568_c0_seq1.path1;Name=comp114568_c0_seq1;Dir=antisensecoverage=99.6;identity=96.6;matches=800;mismatches=27;indels=1;unknowns=0;Target=comp114568_c0_seq1 4 147 .;locus=RLOC_00001351
ChrX	stalkie_big_nohaplotig	exon	23054952	23055277	96	-	.	Parent=comp114568_c0_seq1.mrna1;Target=comp114568_c0_seq1 4 329 -
ChrX	stalkie_big_nohaplotig	exon	23055359	23055542	95	-	.	Parent=comp114568_c0_seq1.mrna1;Target=comp114568_c0_seq1 330 512 -
ChrX	stalkie_big_nohaplotig	exon	23055844	23056161	97	-	.	Parent=comp114568_c0_seq1.mrna1;Target=comp114568_c0_seq1 513 830 -
ChrX	stalkie_big_nohaplotig	CDS	23054952	23055095	.	-	0	Parent=comp114568_c0_seq1.mrna1
ChrX	gffcl	locus	23114063	23138660	.	+	.	ID=RLOC_00001352;geneIDs=FBgn0000497.path1;transcripts=FBgn0000497.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23114063	23138660	.	+	.	ID=FBgn0000497.mrna1;geneID=FBgn0000497.path1;Name=FBgn0000497;Dir=sensecoverage=99.6;identity=99.6;matches=2216;mismatches=9;indels=0;unknowns=0;locus=RLOC_00001352
ChrX	stalkie_big_nohaplotig	exon	23114063	23114245	98	+	.	Parent=FBgn0000497.mrna1;Target=FBgn0000497 11 193 +
ChrX	stalkie_big_nohaplotig	exon	23115841	23116326	100	+	.	Parent=FBgn0000497.mrna1;Target=FBgn0000497 194 679 +
ChrX	stalkie_big_nohaplotig	exon	23119332	23119510	100	+	.	Parent=FBgn0000497.mrna1;Target=FBgn0000497 680 858 +
ChrX	stalkie_big_nohaplotig	exon	23120876	23121583	99	+	.	Parent=FBgn0000497.mrna1;Target=FBgn0000497 859 1566 +
ChrX	stalkie_big_nohaplotig	exon	23130296	23130815	99	+	.	Parent=FBgn0000497.mrna1;Target=FBgn0000497 1567 2086 +
ChrX	stalkie_big_nohaplotig	exon	23138512	23138660	97	+	.	Parent=FBgn0000497.mrna1;Target=FBgn0000497 2087 2235 +
ChrX	stalkie_big_nohaplotig	CDS	23114065	23114245	.	+	0	Parent=FBgn0000497.mrna1;Target=FBgn0000497 13 193 +
ChrX	stalkie_big_nohaplotig	CDS	23115841	23116326	.	+	2	Parent=FBgn0000497.mrna1;Target=FBgn0000497 194 679 +
ChrX	stalkie_big_nohaplotig	CDS	23119332	23119510	.	+	2	Parent=FBgn0000497.mrna1;Target=FBgn0000497 680 858 +
ChrX	stalkie_big_nohaplotig	CDS	23120876	23121583	.	+	0	Parent=FBgn0000497.mrna1;Target=FBgn0000497 859 1566 +
ChrX	stalkie_big_nohaplotig	CDS	23130296	23130815	.	+	0	Parent=FBgn0000497.mrna1;Target=FBgn0000497 1567 2086 +
ChrX	stalkie_big_nohaplotig	CDS	23138512	23138660	.	+	2	Parent=FBgn0000497.mrna1;Target=FBgn0000497 2087 2235 +
ChrX	gffcl	locus	23169482	23169548	.	+	.	ID=RLOC_00001353;geneIDs=comp158064_c2_seq1.path2;transcripts=comp158064_c2_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	23169482	23169548	.	+	.	ID=comp158064_c2_seq1.mrna2;geneID=comp158064_c2_seq1.path2;Name=comp158064_c2_seq1;Dir=indeterminatecoverage=18.7;identity=100.0;matches=67;mismatches=0;indels=0;unknowns=0;Target=comp158064_c2_seq1 345 279 .;locus=RLOC_00001353
ChrX	stalkie_big_nohaplotig	exon	23169482	23169548	100	+	.	Parent=comp158064_c2_seq1.mrna2
ChrX	gffcl	locus	23173115	23174226	.	-	.	ID=RLOC_00001354;geneIDs=comp158817_c1_seq1.path1;transcripts=comp158817_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23173115	23174226	.	-	.	ID=comp158817_c1_seq1.mrna1;geneID=comp158817_c1_seq1.path1;Name=comp158817_c1_seq1;Dir=antisensecoverage=100.0;identity=92.5;matches=735;mismatches=13;indels=47;unknowns=0;Target=comp158817_c1_seq1 651 746 .;locus=RLOC_00001354
ChrX	stalkie_big_nohaplotig	exon	23173115	23173682	90	-	.	Parent=comp158817_c1_seq1.mrna1;Target=comp158817_c1_seq1 1 524 -
ChrX	stalkie_big_nohaplotig	exon	23174000	23174226	96	-	.	Parent=comp158817_c1_seq1.mrna1;Target=comp158817_c1_seq1 525 748 -
ChrX	stalkie_big_nohaplotig	CDS	23174126	23174224	.	-	0	Parent=comp158817_c1_seq1.mrna1
ChrX	gffcl	locus	23238485	23241090	.	-	.	ID=RLOC_00001356;geneIDs=comp147478_c0_seq1.path1,comp162373_c0_seq1.path1;transcripts=comp162373_c0_seq1.mrna1,comp147478_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23238485	23241090	.	-	.	ID=comp162373_c0_seq1.mrna1;geneID=comp162373_c0_seq1.path1;Name=comp162373_c0_seq1;Dir=antisensecoverage=98.6;identity=98.7;matches=1707;mismatches=17;indels=6;unknowns=0;Target=comp162373_c0_seq1 1253 1660 .;locus=RLOC_00001356
ChrX	stalkie_big_nohaplotig	exon	23238485	23238653	100	-	.	Parent=comp162373_c0_seq1.mrna1;Target=comp162373_c0_seq1 19 187 -
ChrX	stalkie_big_nohaplotig	exon	23238714	23238858	98	-	.	Parent=comp162373_c0_seq1.mrna1;Target=comp162373_c0_seq1 188 332 -
ChrX	stalkie_big_nohaplotig	exon	23238935	23239136	95	-	.	Parent=comp162373_c0_seq1.mrna1;Target=comp162373_c0_seq1 333 539 -
ChrX	stalkie_big_nohaplotig	exon	23239204	23239670	98	-	.	Parent=comp162373_c0_seq1.mrna1;Target=comp162373_c0_seq1 540 1007 -
ChrX	stalkie_big_nohaplotig	exon	23240226	23240400	100	-	.	Parent=comp162373_c0_seq1.mrna1;Target=comp162373_c0_seq1 1008 1182 -
ChrX	stalkie_big_nohaplotig	exon	23240525	23241090	99	-	.	Parent=comp162373_c0_seq1.mrna1;Target=comp162373_c0_seq1 1183 1748 -
ChrX	stalkie_big_nohaplotig	CDS	23240595	23241002	.	-	0	Parent=comp162373_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23239649	23240249	.	-	.	ID=comp147478_c0_seq1.mrna1;geneID=comp147478_c0_seq1.path1;Name=comp147478_c0_seq1;Dir=antisensecoverage=100.0;identity=92.8;matches=505;mismatches=23;indels=16;unknowns=0;locus=RLOC_00001356
ChrX	stalkie_big_nohaplotig	exon	23239649	23240153	92	-	.	Parent=comp147478_c0_seq1.mrna1;Target=comp147478_c0_seq1 1 519 -
ChrX	stalkie_big_nohaplotig	exon	23240226	23240249	100	-	.	Parent=comp147478_c0_seq1.mrna1;Target=comp147478_c0_seq1 520 543 -
ChrX	stalkie_big_nohaplotig	CDS	23240076	23240153	.	-	2	Parent=comp147478_c0_seq1.mrna1;Target=comp147478_c0_seq1 443 519 .
ChrX	stalkie_big_nohaplotig	CDS	23240226	23240247	.	-	0	Parent=comp147478_c0_seq1.mrna1;Target=comp147478_c0_seq1 520 541 .
ChrX	gffcl	locus	23317255	25258338	.	-	.	ID=RLOC_00001358;geneIDs=comp154290_c0_seq1.path1;transcripts=comp154290_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23317255	25258338	.	-	.	ID=comp154290_c0_seq1.mrna1;geneID=comp154290_c0_seq1.path1;Name=comp154290_c0_seq1;Dir=antisensecoverage=90.3;identity=96.8;matches=602;mismatches=19;indels=1;unknowns=0;locus=RLOC_00001358
ChrX	stalkie_big_nohaplotig	exon	23317255	23317609	94	-	.	Parent=comp154290_c0_seq1.mrna1;Target=comp154290_c0_seq1 18 372 -
ChrX	stalkie_big_nohaplotig	exon	23317678	23317933	99	-	.	Parent=comp154290_c0_seq1.mrna1;Target=comp154290_c0_seq1 373 629 -
ChrX	stalkie_big_nohaplotig	exon	25253534	25253535	100	-	.	Parent=comp154290_c0_seq1.mrna1;Target=comp154290_c0_seq1 630 631 -
ChrX	stalkie_big_nohaplotig	exon	25258331	25258338	100	-	.	Parent=comp154290_c0_seq1.mrna1;Target=comp154290_c0_seq1 632 639 -
ChrX	stalkie_big_nohaplotig	CDS	23317488	23317609	.	-	2	Parent=comp154290_c0_seq1.mrna1;Target=comp154290_c0_seq1 251 372 .
ChrX	stalkie_big_nohaplotig	CDS	23317678	23317828	.	-	0	Parent=comp154290_c0_seq1.mrna1;Target=comp154290_c0_seq1 373 523 .
ChrX	gffcl	locus	23328958	23330025	.	+	.	ID=RLOC_00001359;geneIDs=FBgn0020305.1.path1;transcripts=FBgn0020305.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23328958	23330025	.	+	.	ID=FBgn0020305.1.mrna1;geneID=FBgn0020305.1.path1;Name=FBgn0020305.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1065;mismatches=3;indels=0;unknowns=0;Target=FBgn0020305.1 1068 1 .;locus=RLOC_00001359
ChrX	stalkie_big_nohaplotig	exon	23328958	23330025	99	+	.	Parent=FBgn0020305.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23328958	23330025	.	+	0	Parent=FBgn0020305.1.mrna1
ChrX	gffcl	locus	23332046	23335463	.	+	.	ID=RLOC_00001360;geneIDs=FBgn0031233.1.path1;transcripts=FBgn0031233.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23332046	23335463	.	+	.	ID=FBgn0031233.1.mrna1;geneID=FBgn0031233.1.path1;Name=FBgn0031233.1;Dir=sensecoverage=100.0;identity=99.8;matches=2111;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001360
ChrX	stalkie_big_nohaplotig	exon	23332046	23332162	100	+	.	Parent=FBgn0031233.1.mrna1;Target=FBgn0031233.1 1 117 +
ChrX	stalkie_big_nohaplotig	exon	23332280	23333159	99	+	.	Parent=FBgn0031233.1.mrna1;Target=FBgn0031233.1 118 997 +
ChrX	stalkie_big_nohaplotig	exon	23334284	23334744	99	+	.	Parent=FBgn0031233.1.mrna1;Target=FBgn0031233.1 998 1458 +
ChrX	stalkie_big_nohaplotig	exon	23334807	23335463	99	+	.	Parent=FBgn0031233.1.mrna1;Target=FBgn0031233.1 1459 2115 +
ChrX	stalkie_big_nohaplotig	CDS	23332046	23332162	.	+	0	Parent=FBgn0031233.1.mrna1;Target=FBgn0031233.1 1 117 +
ChrX	stalkie_big_nohaplotig	CDS	23332280	23333159	.	+	0	Parent=FBgn0031233.1.mrna1;Target=FBgn0031233.1 118 997 +
ChrX	stalkie_big_nohaplotig	CDS	23334284	23334744	.	+	2	Parent=FBgn0031233.1.mrna1;Target=FBgn0031233.1 998 1458 +
ChrX	stalkie_big_nohaplotig	CDS	23334807	23335463	.	+	0	Parent=FBgn0031233.1.mrna1;Target=FBgn0031233.1 1459 2115 +
ChrX	gffcl	locus	23338682	23338923	.	-	.	ID=RLOC_00001361;geneIDs=comp200131_c0_seq1.path1;transcripts=comp200131_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23338682	23338923	.	-	.	ID=comp200131_c0_seq1.mrna1;geneID=comp200131_c0_seq1.path1;Name=comp200131_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=241;mismatches=1;indels=0;unknowns=0;Target=comp200131_c0_seq1 242 1 .;CDS_Target=comp200131_c0_seq1 71 3 .;locus=RLOC_00001361
ChrX	stalkie_big_nohaplotig	exon	23338682	23338923	99	-	.	Parent=comp200131_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23338853	23338921	.	-	0	Parent=comp200131_c0_seq1.mrna1
ChrX	gffcl	locus	23339700	23341276	.	.	.	ID=RLOC_00001362;geneIDs=comp121757_c0_seq1.path1,comp143482_c0_seq1.path1,comp143482_c0_seq1.path2,comp156303_c0_seq1.path1;transcripts=comp121757_c0_seq1.mrna1,comp156303_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23339700	23339931	.	-	.	ID=comp121757_c0_seq1.mrna1;geneID=comp121757_c0_seq1.path1;Name=comp121757_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=230;mismatches=2;indels=0;unknowns=0;Target=comp121757_c0_seq1 232 1 .;CDS_Target=comp121757_c0_seq1 67 2 .;locus=RLOC_00001362
ChrX	stalkie_big_nohaplotig	exon	23339700	23339931	99	-	.	Parent=comp121757_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23339865	23339930	.	-	0	Parent=comp121757_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23340026	23341276	.	+	.	ID=comp156303_c0_seq1.mrna1;geneID=comp156303_c0_seq1.path1;Name=comp156303_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.3;matches=1245;mismatches=6;indels=3;unknowns=0;Target=comp156303_c0_seq1 1254 1 .;CDS_Target=comp156303_c0_seq1 119 3 .;locus=RLOC_00001362
ChrX	stalkie_big_nohaplotig	exon	23340026	23341276	99	+	.	Parent=comp156303_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23340028	23340143	.	+	0	Parent=comp156303_c0_seq1.mrna1
ChrX	gffcl	locus	23374747	23392353	.	-	.	ID=RLOC_00001364;geneIDs=comp162297_c2_seq1.path1;transcripts=comp162297_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23374747	23392353	.	-	.	ID=comp162297_c2_seq1.mrna1;geneID=comp162297_c2_seq1.path1;Name=comp162297_c2_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=7983;mismatches=10;indels=0;unknowns=0;locus=RLOC_00001364
ChrX	stalkie_big_nohaplotig	exon	23374747	23375127	100	-	.	Parent=comp162297_c2_seq1.mrna1;Target=comp162297_c2_seq1 7613 7993 +
ChrX	stalkie_big_nohaplotig	exon	23377863	23378724	100	-	.	Parent=comp162297_c2_seq1.mrna1;Target=comp162297_c2_seq1 6751 7612 +
ChrX	stalkie_big_nohaplotig	exon	23381062	23381262	100	-	.	Parent=comp162297_c2_seq1.mrna1;Target=comp162297_c2_seq1 6550 6750 +
ChrX	stalkie_big_nohaplotig	exon	23382742	23382831	100	-	.	Parent=comp162297_c2_seq1.mrna1;Target=comp162297_c2_seq1 6460 6549 +
ChrX	stalkie_big_nohaplotig	exon	23383027	23383213	100	-	.	Parent=comp162297_c2_seq1.mrna1;Target=comp162297_c2_seq1 6273 6459 +
ChrX	stalkie_big_nohaplotig	exon	23385570	23385723	100	-	.	Parent=comp162297_c2_seq1.mrna1;Target=comp162297_c2_seq1 6119 6272 +
ChrX	stalkie_big_nohaplotig	exon	23386115	23386202	100	-	.	Parent=comp162297_c2_seq1.mrna1;Target=comp162297_c2_seq1 6031 6118 +
ChrX	stalkie_big_nohaplotig	exon	23386259	23386436	100	-	.	Parent=comp162297_c2_seq1.mrna1;Target=comp162297_c2_seq1 5853 6030 +
ChrX	stalkie_big_nohaplotig	exon	23386502	23392353	99	-	.	Parent=comp162297_c2_seq1.mrna1;Target=comp162297_c2_seq1 1 5852 +
ChrX	stalkie_big_nohaplotig	CDS	23374747	23375127	.	-	0	Parent=comp162297_c2_seq1.mrna1;Target=comp162297_c2_seq1 7613 7993 +
ChrX	stalkie_big_nohaplotig	CDS	23377863	23378724	.	-	1	Parent=comp162297_c2_seq1.mrna1;Target=comp162297_c2_seq1 6751 7612 +
ChrX	stalkie_big_nohaplotig	CDS	23381062	23381262	.	-	1	Parent=comp162297_c2_seq1.mrna1;Target=comp162297_c2_seq1 6550 6750 +
ChrX	stalkie_big_nohaplotig	CDS	23382742	23382831	.	-	1	Parent=comp162297_c2_seq1.mrna1;Target=comp162297_c2_seq1 6460 6549 +
ChrX	stalkie_big_nohaplotig	CDS	23383027	23383213	.	-	2	Parent=comp162297_c2_seq1.mrna1;Target=comp162297_c2_seq1 6273 6459 +
ChrX	stalkie_big_nohaplotig	CDS	23385570	23385723	.	-	0	Parent=comp162297_c2_seq1.mrna1;Target=comp162297_c2_seq1 6119 6272 +
ChrX	stalkie_big_nohaplotig	CDS	23386115	23386202	.	-	1	Parent=comp162297_c2_seq1.mrna1;Target=comp162297_c2_seq1 6031 6118 +
ChrX	stalkie_big_nohaplotig	CDS	23386259	23386436	.	-	2	Parent=comp162297_c2_seq1.mrna1;Target=comp162297_c2_seq1 5853 6030 +
ChrX	stalkie_big_nohaplotig	CDS	23386502	23392352	.	-	0	Parent=comp162297_c2_seq1.mrna1;Target=comp162297_c2_seq1 2 5852 +
ChrX	gffcl	locus	23414032	23414464	.	+	.	ID=RLOC_00001365;geneIDs=comp115821_c1_seq1.path1;transcripts=comp115821_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23414032	23414464	.	+	.	ID=comp115821_c1_seq1.mrna1;geneID=comp115821_c1_seq1.path1;Name=comp115821_c1_seq1;Dir=indeterminatecoverage=99.8;identity=99.5;matches=431;mismatches=2;indels=0;unknowns=0;Target=comp115821_c1_seq1 434 2 .;CDS_Target=comp115821_c1_seq1 414 301 .;locus=RLOC_00001365
ChrX	stalkie_big_nohaplotig	exon	23414032	23414464	99	+	.	Parent=comp115821_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23414331	23414444	.	+	0	Parent=comp115821_c1_seq1.mrna1
ChrX	gffcl	locus	23443006	23444434	.	+	.	ID=RLOC_00001366;geneIDs=FBgn0022246.1.path1;transcripts=FBgn0022246.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23443006	23444434	.	+	.	ID=FBgn0022246.1.mrna1;geneID=FBgn0022246.1.path1;Name=FBgn0022246.1;Dir=sensecoverage=99.9;identity=99.1;matches=894;mismatches=8;indels=0;unknowns=0;locus=RLOC_00001366
ChrX	stalkie_big_nohaplotig	exon	23443006	23443108	99	+	.	Parent=FBgn0022246.1.mrna1;Target=FBgn0022246.1 1 103 +
ChrX	stalkie_big_nohaplotig	exon	23443170	23443357	97	+	.	Parent=FBgn0022246.1.mrna1;Target=FBgn0022246.1 104 291 +
ChrX	stalkie_big_nohaplotig	exon	23443414	23443482	98	+	.	Parent=FBgn0022246.1.mrna1;Target=FBgn0022246.1 292 360 +
ChrX	stalkie_big_nohaplotig	exon	23443540	23443814	99	+	.	Parent=FBgn0022246.1.mrna1;Target=FBgn0022246.1 361 635 +
ChrX	stalkie_big_nohaplotig	exon	23444082	23444161	100	+	.	Parent=FBgn0022246.1.mrna1;Target=FBgn0022246.1 636 715 +
ChrX	stalkie_big_nohaplotig	exon	23444248	23444434	99	+	.	Parent=FBgn0022246.1.mrna1;Target=FBgn0022246.1 716 902 +
ChrX	stalkie_big_nohaplotig	CDS	23443006	23443108	.	+	0	Parent=FBgn0022246.1.mrna1;Target=FBgn0022246.1 1 103 +
ChrX	stalkie_big_nohaplotig	CDS	23443170	23443357	.	+	2	Parent=FBgn0022246.1.mrna1;Target=FBgn0022246.1 104 291 +
ChrX	stalkie_big_nohaplotig	CDS	23443414	23443482	.	+	0	Parent=FBgn0022246.1.mrna1;Target=FBgn0022246.1 292 360 +
ChrX	stalkie_big_nohaplotig	CDS	23443540	23443814	.	+	0	Parent=FBgn0022246.1.mrna1;Target=FBgn0022246.1 361 635 +
ChrX	stalkie_big_nohaplotig	CDS	23444082	23444161	.	+	1	Parent=FBgn0022246.1.mrna1;Target=FBgn0022246.1 636 715 +
ChrX	stalkie_big_nohaplotig	CDS	23444248	23444432	.	+	2	Parent=FBgn0022246.1.mrna1;Target=FBgn0022246.1 716 900 +
ChrX	gffcl	locus	23448420	23448650	.	-	.	ID=RLOC_00001367;geneIDs=comp148052_c0_seq1.path1;transcripts=comp148052_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23448420	23448650	.	-	.	ID=comp148052_c0_seq1.mrna1;geneID=comp148052_c0_seq1.path1;Name=comp148052_c0_seq1;Dir=indeterminatecoverage=91.4;identity=89.8;matches=219;mismatches=12;indels=13;unknowns=0;Target=comp148052_c0_seq1 265 22 .;CDS_Target=comp148052_c0_seq1 25 23 .;locus=RLOC_00001367
ChrX	stalkie_big_nohaplotig	exon	23448420	23448650	89	-	.	Parent=comp148052_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23448647	23448649	.	-	0	Parent=comp148052_c0_seq1.mrna1
ChrX	gffcl	locus	23450113	23452046	.	.	.	ID=RLOC_00001368;geneIDs=Dp_FBgn0249067.path1,Dp_FBgn0249326.path1,comp160022_c0_seq1.path1;transcripts=comp160022_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23450113	23452046	.	-	.	ID=comp160022_c0_seq1.mrna1;geneID=comp160022_c0_seq1.path1;Name=comp160022_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1926;mismatches=8;indels=6;unknowns=0;Target=comp160022_c0_seq1 1940 1 .;CDS_Target=comp160022_c0_seq1 692 468 .;locus=RLOC_00001368
ChrX	stalkie_big_nohaplotig	exon	23450113	23452046	99	-	.	Parent=comp160022_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23451356	23451580	.	-	0	Parent=comp160022_c0_seq1.mrna1
ChrX	gffcl	locus	23453390	23461856	.	-	.	ID=RLOC_00001369;geneIDs=FBgn0031238.1.path1;transcripts=FBgn0031238.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23453390	23461856	.	-	.	ID=FBgn0031238.1.mrna1;geneID=FBgn0031238.1.path1;Name=FBgn0031238.1;Dir=sensecoverage=100.0;identity=99.9;matches=1598;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001369
ChrX	stalkie_big_nohaplotig	exon	23453390	23453887	100	-	.	Parent=FBgn0031238.1.mrna1;Target=FBgn0031238.1 1102 1599 +
ChrX	stalkie_big_nohaplotig	exon	23453960	23454134	100	-	.	Parent=FBgn0031238.1.mrna1;Target=FBgn0031238.1 927 1101 +
ChrX	stalkie_big_nohaplotig	exon	23454194	23454442	100	-	.	Parent=FBgn0031238.1.mrna1;Target=FBgn0031238.1 678 926 +
ChrX	stalkie_big_nohaplotig	exon	23455727	23455922	100	-	.	Parent=FBgn0031238.1.mrna1;Target=FBgn0031238.1 482 677 +
ChrX	stalkie_big_nohaplotig	exon	23455987	23456146	100	-	.	Parent=FBgn0031238.1.mrna1;Target=FBgn0031238.1 322 481 +
ChrX	stalkie_big_nohaplotig	exon	23457625	23457795	100	-	.	Parent=FBgn0031238.1.mrna1;Target=FBgn0031238.1 151 321 +
ChrX	stalkie_big_nohaplotig	exon	23457883	23457991	100	-	.	Parent=FBgn0031238.1.mrna1;Target=FBgn0031238.1 42 150 +
ChrX	stalkie_big_nohaplotig	exon	23461816	23461856	97	-	.	Parent=FBgn0031238.1.mrna1;Target=FBgn0031238.1 1 41 +
ChrX	stalkie_big_nohaplotig	CDS	23453390	23453887	.	-	0	Parent=FBgn0031238.1.mrna1;Target=FBgn0031238.1 1102 1599 +
ChrX	stalkie_big_nohaplotig	CDS	23453960	23454134	.	-	1	Parent=FBgn0031238.1.mrna1;Target=FBgn0031238.1 927 1101 +
ChrX	stalkie_big_nohaplotig	CDS	23454194	23454442	.	-	1	Parent=FBgn0031238.1.mrna1;Target=FBgn0031238.1 678 926 +
ChrX	stalkie_big_nohaplotig	CDS	23455727	23455922	.	-	2	Parent=FBgn0031238.1.mrna1;Target=FBgn0031238.1 482 677 +
ChrX	stalkie_big_nohaplotig	CDS	23455987	23456146	.	-	0	Parent=FBgn0031238.1.mrna1;Target=FBgn0031238.1 322 481 +
ChrX	stalkie_big_nohaplotig	CDS	23457625	23457795	.	-	0	Parent=FBgn0031238.1.mrna1;Target=FBgn0031238.1 151 321 +
ChrX	stalkie_big_nohaplotig	CDS	23457883	23457991	.	-	1	Parent=FBgn0031238.1.mrna1;Target=FBgn0031238.1 42 150 +
ChrX	stalkie_big_nohaplotig	CDS	23461816	23461856	.	-	0	Parent=FBgn0031238.1.mrna1;Target=FBgn0031238.1 1 41 +
ChrX	gffcl	locus	23475280	23559053	.	-	.	ID=RLOC_00001370;geneIDs=comp151297_c1_seq1.path1;transcripts=comp151297_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23475280	23559053	.	-	.	ID=comp151297_c1_seq1.mrna1;geneID=comp151297_c1_seq1.path1;Name=comp151297_c1_seq1;Dir=antisensecoverage=92.3;identity=99.5;matches=416;mismatches=2;indels=0;unknowns=0;Target=comp151297_c1_seq1 320 442 .;locus=RLOC_00001370
ChrX	stalkie_big_nohaplotig	exon	23475280	23475364	98	-	.	Parent=comp151297_c1_seq1.mrna1;Target=comp151297_c1_seq1 27 111 -
ChrX	stalkie_big_nohaplotig	exon	23513873	23513910	100	-	.	Parent=comp151297_c1_seq1.mrna1;Target=comp151297_c1_seq1 112 149 -
ChrX	stalkie_big_nohaplotig	exon	23552954	23553047	100	-	.	Parent=comp151297_c1_seq1.mrna1;Target=comp151297_c1_seq1 150 243 -
ChrX	stalkie_big_nohaplotig	exon	23558853	23559053	99	-	.	Parent=comp151297_c1_seq1.mrna1;Target=comp151297_c1_seq1 244 444 -
ChrX	stalkie_big_nohaplotig	CDS	23558929	23559051	.	-	0	Parent=comp151297_c1_seq1.mrna1
ChrX	gffcl	locus	23484683	23485270	.	+	.	ID=RLOC_00001371;geneIDs=comp117644_c0_seq1.path1;transcripts=comp117644_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23484683	23485270	.	+	.	ID=comp117644_c0_seq1.mrna1;geneID=comp117644_c0_seq1.path1;Name=comp117644_c0_seq1;Dir=indeterminatecoverage=93.5;identity=98.1;matches=578;mismatches=1;indels=10;unknowns=0;Target=comp117644_c0_seq1 580 1 .;CDS_Target=comp117644_c0_seq1 221 186 .;locus=RLOC_00001371
ChrX	stalkie_big_nohaplotig	exon	23484683	23485270	98	+	.	Parent=comp117644_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23484875	23484909	.	+	0	Parent=comp117644_c0_seq1.mrna1
ChrX	gffcl	locus	23485355	23486113	.	-	.	ID=RLOC_00001372;geneIDs=comp74271_c0_seq1.path1;transcripts=comp74271_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23485355	23486113	.	-	.	ID=comp74271_c0_seq1.mrna1;geneID=comp74271_c0_seq1.path1;Name=comp74271_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=759;mismatches=0;indels=0;unknowns=0;Target=comp74271_c0_seq1 759 1 .;CDS_Target=comp74271_c0_seq1 87 1 .;locus=RLOC_00001372
ChrX	stalkie_big_nohaplotig	exon	23485355	23486113	100	-	.	Parent=comp74271_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23486027	23486113	.	-	0	Parent=comp74271_c0_seq1.mrna1
ChrX	gffcl	locus	23530839	23531462	.	-	.	ID=RLOC_00001373;geneIDs=comp143629_c0_seq1.path1;transcripts=comp143629_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23530839	23531462	.	-	.	ID=comp143629_c0_seq1.mrna1;geneID=comp143629_c0_seq1.path1;Name=comp143629_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=623;mismatches=1;indels=1;unknowns=0;Target=comp143629_c0_seq1 625 1 .;CDS_Target=comp143629_c0_seq1 577 374 .;locus=RLOC_00001373
ChrX	stalkie_big_nohaplotig	exon	23530839	23531462	99	-	.	Parent=comp143629_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23530887	23531089	.	-	0	Parent=comp143629_c0_seq1.mrna1
ChrX	gffcl	locus	23533050	23533297	.	-	.	ID=RLOC_00001374;geneIDs=comp144778_c0_seq1.path1;transcripts=comp144778_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23533050	23533297	.	-	.	ID=comp144778_c0_seq1.mrna1;geneID=comp144778_c0_seq1.path1;Name=comp144778_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=247;mismatches=1;indels=0;unknowns=0;Target=comp144778_c0_seq1 248 1 .;CDS_Target=comp144778_c0_seq1 60 1 .;locus=RLOC_00001374
ChrX	stalkie_big_nohaplotig	exon	23533050	23533297	99	-	.	Parent=comp144778_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23533238	23533297	.	-	0	Parent=comp144778_c0_seq1.mrna1
ChrX	gffcl	locus	23534329	23537637	.	-	.	ID=RLOC_00001375;geneIDs=FBgn0031239.1.path1;transcripts=FBgn0031239.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23534329	23537637	.	-	.	ID=FBgn0031239.1.mrna1;geneID=FBgn0031239.1.path1;Name=FBgn0031239.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=3307;mismatches=2;indels=0;unknowns=0;Target=FBgn0031239.1 3309 1 .;locus=RLOC_00001375
ChrX	stalkie_big_nohaplotig	exon	23534329	23537637	99	-	.	Parent=FBgn0031239.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23534329	23537637	.	-	0	Parent=FBgn0031239.1.mrna1
ChrX	gffcl	locus	23565757	23569859	.	+	.	ID=RLOC_00001376;geneIDs=FBgn0011570.1.path1,comp151759_c1_seq1.path1;transcripts=FBgn0011570.1.mrna1,comp151759_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23565757	23569859	.	+	.	ID=FBgn0011570.1.mrna1;geneID=FBgn0011570.1.path1;Name=FBgn0011570.1;Dir=sensecoverage=100.0;identity=100.0;matches=984;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001376
ChrX	stalkie_big_nohaplotig	exon	23565757	23565915	100	+	.	Parent=FBgn0011570.1.mrna1;Target=FBgn0011570.1 1 159 +
ChrX	stalkie_big_nohaplotig	exon	23569035	23569859	100	+	.	Parent=FBgn0011570.1.mrna1;Target=FBgn0011570.1 160 984 +
ChrX	stalkie_big_nohaplotig	CDS	23565757	23565915	.	+	0	Parent=FBgn0011570.1.mrna1;Target=FBgn0011570.1 1 159 +
ChrX	stalkie_big_nohaplotig	CDS	23569035	23569859	.	+	0	Parent=FBgn0011570.1.mrna1;Target=FBgn0011570.1 160 984 +
ChrX	stalkie_big_nohaplotig	mRNA	23565892	23567507	.	+	.	ID=comp151759_c1_seq1.mrna1;geneID=comp151759_c1_seq1.path1;Name=comp151759_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1610;mismatches=6;indels=0;unknowns=0;Target=comp151759_c1_seq1 1616 1 .;CDS_Target=comp151759_c1_seq1 345 151 .;locus=RLOC_00001376
ChrX	stalkie_big_nohaplotig	exon	23565892	23567507	99	+	.	Parent=comp151759_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23566042	23566236	.	+	0	Parent=comp151759_c1_seq1.mrna1
ChrX	gffcl	locus	23570790	23571163	.	+	.	ID=RLOC_00001377;geneIDs=comp143655_c1_seq1.path1;transcripts=comp143655_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23570790	23571163	.	+	.	ID=comp143655_c1_seq1.mrna1;geneID=comp143655_c1_seq1.path1;Name=comp143655_c1_seq1;Dir=indeterminatecoverage=92.3;identity=98.7;matches=369;mismatches=2;indels=3;unknowns=0;Target=comp143655_c1_seq1 371 1 .;CDS_Target=comp143655_c1_seq1 140 3 .;locus=RLOC_00001377
ChrX	stalkie_big_nohaplotig	exon	23570790	23571163	98	+	.	Parent=comp143655_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23570792	23570932	.	+	0	Parent=comp143655_c1_seq1.mrna1
ChrX	gffcl	locus	23572863	23573387	.	+	.	ID=RLOC_00001378;geneIDs=comp143647_c0_seq1.path1;transcripts=comp143647_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23572863	23573387	.	+	.	ID=comp143647_c0_seq1.mrna1;geneID=comp143647_c0_seq1.path1;Name=comp143647_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=525;mismatches=0;indels=0;unknowns=0;Target=comp143647_c0_seq1 525 1 .;CDS_Target=comp143647_c0_seq1 199 68 .;locus=RLOC_00001378
ChrX	stalkie_big_nohaplotig	exon	23572863	23573387	100	+	.	Parent=comp143647_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23572930	23573061	.	+	0	Parent=comp143647_c0_seq1.mrna1
ChrX	gffcl	locus	23573997	23580103	.	-	.	ID=RLOC_00001379;geneIDs=FBgn0031356.1.path1;transcripts=FBgn0031356.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23573997	23580103	.	-	.	ID=FBgn0031356.1.mrna1;geneID=FBgn0031356.1.path1;Name=FBgn0031356.1;Dir=sensecoverage=100.0;identity=99.8;matches=1668;mismatches=3;indels=0;unknowns=0;locus=RLOC_00001379
ChrX	stalkie_big_nohaplotig	exon	23573997	23574223	100	-	.	Parent=FBgn0031356.1.mrna1;Target=FBgn0031356.1 1445 1671 +
ChrX	stalkie_big_nohaplotig	exon	23574727	23574880	100	-	.	Parent=FBgn0031356.1.mrna1;Target=FBgn0031356.1 1291 1444 +
ChrX	stalkie_big_nohaplotig	exon	23575773	23575893	100	-	.	Parent=FBgn0031356.1.mrna1;Target=FBgn0031356.1 1170 1290 +
ChrX	stalkie_big_nohaplotig	exon	23575951	23576166	99	-	.	Parent=FBgn0031356.1.mrna1;Target=FBgn0031356.1 954 1169 +
ChrX	stalkie_big_nohaplotig	exon	23576313	23576596	100	-	.	Parent=FBgn0031356.1.mrna1;Target=FBgn0031356.1 670 953 +
ChrX	stalkie_big_nohaplotig	exon	23576709	23576870	100	-	.	Parent=FBgn0031356.1.mrna1;Target=FBgn0031356.1 508 669 +
ChrX	stalkie_big_nohaplotig	exon	23579359	23579586	99	-	.	Parent=FBgn0031356.1.mrna1;Target=FBgn0031356.1 280 507 +
ChrX	stalkie_big_nohaplotig	exon	23579666	23579748	100	-	.	Parent=FBgn0031356.1.mrna1;Target=FBgn0031356.1 197 279 +
ChrX	stalkie_big_nohaplotig	exon	23579812	23579872	98	-	.	Parent=FBgn0031356.1.mrna1;Target=FBgn0031356.1 136 196 +
ChrX	stalkie_big_nohaplotig	exon	23579969	23580103	100	-	.	Parent=FBgn0031356.1.mrna1;Target=FBgn0031356.1 1 135 +
ChrX	stalkie_big_nohaplotig	CDS	23573997	23574223	.	-	2	Parent=FBgn0031356.1.mrna1;Target=FBgn0031356.1 1445 1671 +
ChrX	stalkie_big_nohaplotig	CDS	23574727	23574880	.	-	0	Parent=FBgn0031356.1.mrna1;Target=FBgn0031356.1 1291 1444 +
ChrX	stalkie_big_nohaplotig	CDS	23575773	23575893	.	-	1	Parent=FBgn0031356.1.mrna1;Target=FBgn0031356.1 1170 1290 +
ChrX	stalkie_big_nohaplotig	CDS	23575951	23576166	.	-	1	Parent=FBgn0031356.1.mrna1;Target=FBgn0031356.1 954 1169 +
ChrX	stalkie_big_nohaplotig	CDS	23576313	23576596	.	-	0	Parent=FBgn0031356.1.mrna1;Target=FBgn0031356.1 670 953 +
ChrX	stalkie_big_nohaplotig	CDS	23576709	23576870	.	-	0	Parent=FBgn0031356.1.mrna1;Target=FBgn0031356.1 508 669 +
ChrX	stalkie_big_nohaplotig	CDS	23579359	23579586	.	-	0	Parent=FBgn0031356.1.mrna1;Target=FBgn0031356.1 280 507 +
ChrX	stalkie_big_nohaplotig	CDS	23579666	23579748	.	-	2	Parent=FBgn0031356.1.mrna1;Target=FBgn0031356.1 197 279 +
ChrX	stalkie_big_nohaplotig	CDS	23579812	23579872	.	-	0	Parent=FBgn0031356.1.mrna1;Target=FBgn0031356.1 136 196 +
ChrX	stalkie_big_nohaplotig	CDS	23579969	23580103	.	-	0	Parent=FBgn0031356.1.mrna1;Target=FBgn0031356.1 1 135 +
ChrX	gffcl	locus	23585833	23586595	.	+	.	ID=RLOC_00001380;geneIDs=FBgn0031357.1.path1;transcripts=FBgn0031357.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23585833	23586595	.	+	.	ID=FBgn0031357.1.mrna1;geneID=FBgn0031357.1.path1;Name=FBgn0031357.1;Dir=sensecoverage=100.0;identity=100.0;matches=570;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001380
ChrX	stalkie_big_nohaplotig	exon	23585833	23585868	100	+	.	Parent=FBgn0031357.1.mrna1;Target=FBgn0031357.1 1 36 +
ChrX	stalkie_big_nohaplotig	exon	23585938	23586045	100	+	.	Parent=FBgn0031357.1.mrna1;Target=FBgn0031357.1 37 144 +
ChrX	stalkie_big_nohaplotig	exon	23586101	23586234	100	+	.	Parent=FBgn0031357.1.mrna1;Target=FBgn0031357.1 145 278 +
ChrX	stalkie_big_nohaplotig	exon	23586304	23586595	100	+	.	Parent=FBgn0031357.1.mrna1;Target=FBgn0031357.1 279 570 +
ChrX	stalkie_big_nohaplotig	CDS	23585833	23585868	.	+	0	Parent=FBgn0031357.1.mrna1;Target=FBgn0031357.1 1 36 +
ChrX	stalkie_big_nohaplotig	CDS	23585938	23586045	.	+	0	Parent=FBgn0031357.1.mrna1;Target=FBgn0031357.1 37 144 +
ChrX	stalkie_big_nohaplotig	CDS	23586101	23586234	.	+	0	Parent=FBgn0031357.1.mrna1;Target=FBgn0031357.1 145 278 +
ChrX	stalkie_big_nohaplotig	CDS	23586304	23586595	.	+	1	Parent=FBgn0031357.1.mrna1;Target=FBgn0031357.1 279 570 +
ChrX	gffcl	locus	23588607	23592638	.	-	.	ID=RLOC_00001381;geneIDs=FBgn0086698.1.path1;transcripts=FBgn0086698.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23588607	23592638	.	-	.	ID=FBgn0086698.1.mrna1;geneID=FBgn0086698.1.path1;Name=FBgn0086698.1;Dir=sensecoverage=100.0;identity=99.5;matches=2501;mismatches=13;indels=0;unknowns=0;locus=RLOC_00001381
ChrX	stalkie_big_nohaplotig	exon	23588607	23588863	100	-	.	Parent=FBgn0086698.1.mrna1;Target=FBgn0086698.1 2258 2514 +
ChrX	stalkie_big_nohaplotig	exon	23589692	23590263	98	-	.	Parent=FBgn0086698.1.mrna1;Target=FBgn0086698.1 1686 2257 +
ChrX	stalkie_big_nohaplotig	exon	23590539	23591164	100	-	.	Parent=FBgn0086698.1.mrna1;Target=FBgn0086698.1 1060 1685 +
ChrX	stalkie_big_nohaplotig	exon	23591227	23591551	99	-	.	Parent=FBgn0086698.1.mrna1;Target=FBgn0086698.1 735 1059 +
ChrX	stalkie_big_nohaplotig	exon	23591636	23591936	99	-	.	Parent=FBgn0086698.1.mrna1;Target=FBgn0086698.1 434 734 +
ChrX	stalkie_big_nohaplotig	exon	23592206	23592638	99	-	.	Parent=FBgn0086698.1.mrna1;Target=FBgn0086698.1 1 433 +
ChrX	stalkie_big_nohaplotig	CDS	23588607	23588863	.	-	2	Parent=FBgn0086698.1.mrna1;Target=FBgn0086698.1 2258 2514 +
ChrX	stalkie_big_nohaplotig	CDS	23589692	23590263	.	-	1	Parent=FBgn0086698.1.mrna1;Target=FBgn0086698.1 1686 2257 +
ChrX	stalkie_big_nohaplotig	CDS	23590539	23591164	.	-	0	Parent=FBgn0086698.1.mrna1;Target=FBgn0086698.1 1060 1685 +
ChrX	stalkie_big_nohaplotig	CDS	23591227	23591551	.	-	1	Parent=FBgn0086698.1.mrna1;Target=FBgn0086698.1 735 1059 +
ChrX	stalkie_big_nohaplotig	CDS	23591636	23591936	.	-	2	Parent=FBgn0086698.1.mrna1;Target=FBgn0086698.1 434 734 +
ChrX	stalkie_big_nohaplotig	CDS	23592206	23592638	.	-	0	Parent=FBgn0086698.1.mrna1;Target=FBgn0086698.1 1 433 +
ChrX	gffcl	locus	23596300	23596599	.	+	.	ID=RLOC_00001382;geneIDs=comp146154_c0_seq1.path1;transcripts=comp146154_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23596300	23596599	.	+	.	ID=comp146154_c0_seq1.mrna1;geneID=comp146154_c0_seq1.path1;Name=comp146154_c0_seq1;Dir=indeterminatecoverage=74.4;identity=98.7;matches=296;mismatches=4;indels=0;unknowns=0;Target=comp146154_c0_seq1 300 1 .;CDS_Target=comp146154_c0_seq1 174 112 .;locus=RLOC_00001382
ChrX	stalkie_big_nohaplotig	exon	23596300	23596599	98	+	.	Parent=comp146154_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23596411	23596473	.	+	0	Parent=comp146154_c0_seq1.mrna1
ChrX	gffcl	locus	23597047	23597590	.	-	.	ID=RLOC_00001383;geneIDs=comp134805_c0_seq1.path1;transcripts=comp134805_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23597047	23597590	.	-	.	ID=comp134805_c0_seq1.mrna1;geneID=comp134805_c0_seq1.path1;Name=comp134805_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.4;matches=542;mismatches=2;indels=1;unknowns=0;Target=comp134805_c0_seq1 546 2 .;CDS_Target=comp134805_c0_seq1 469 341 .;locus=RLOC_00001383
ChrX	stalkie_big_nohaplotig	exon	23597047	23597590	99	-	.	Parent=comp134805_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23597124	23597251	.	-	0	Parent=comp134805_c0_seq1.mrna1
ChrX	gffcl	locus	23599014	23644111	.	-	.	ID=RLOC_00001384;geneIDs=FBgn0031359.1.path1;transcripts=FBgn0031359.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23599014	23644111	.	-	.	ID=FBgn0031359.1.mrna1;geneID=FBgn0031359.1.path1;Name=FBgn0031359.1;Dir=sensecoverage=100.0;identity=100.0;matches=1131;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001384
ChrX	stalkie_big_nohaplotig	exon	23599014	23599137	100	-	.	Parent=FBgn0031359.1.mrna1;Target=FBgn0031359.1 1008 1131 +
ChrX	stalkie_big_nohaplotig	exon	23600941	23601158	100	-	.	Parent=FBgn0031359.1.mrna1;Target=FBgn0031359.1 790 1007 +
ChrX	stalkie_big_nohaplotig	exon	23601219	23601492	100	-	.	Parent=FBgn0031359.1.mrna1;Target=FBgn0031359.1 516 789 +
ChrX	stalkie_big_nohaplotig	exon	23601562	23601693	100	-	.	Parent=FBgn0031359.1.mrna1;Target=FBgn0031359.1 384 515 +
ChrX	stalkie_big_nohaplotig	exon	23603135	23603205	100	-	.	Parent=FBgn0031359.1.mrna1;Target=FBgn0031359.1 313 383 +
ChrX	stalkie_big_nohaplotig	exon	23606878	23607097	100	-	.	Parent=FBgn0031359.1.mrna1;Target=FBgn0031359.1 93 312 +
ChrX	stalkie_big_nohaplotig	exon	23644020	23644111	100	-	.	Parent=FBgn0031359.1.mrna1;Target=FBgn0031359.1 1 92 +
ChrX	stalkie_big_nohaplotig	CDS	23599014	23599137	.	-	1	Parent=FBgn0031359.1.mrna1;Target=FBgn0031359.1 1008 1131 +
ChrX	stalkie_big_nohaplotig	CDS	23600941	23601158	.	-	0	Parent=FBgn0031359.1.mrna1;Target=FBgn0031359.1 790 1007 +
ChrX	stalkie_big_nohaplotig	CDS	23601219	23601492	.	-	1	Parent=FBgn0031359.1.mrna1;Target=FBgn0031359.1 516 789 +
ChrX	stalkie_big_nohaplotig	CDS	23601562	23601693	.	-	1	Parent=FBgn0031359.1.mrna1;Target=FBgn0031359.1 384 515 +
ChrX	stalkie_big_nohaplotig	CDS	23603135	23603205	.	-	0	Parent=FBgn0031359.1.mrna1;Target=FBgn0031359.1 313 383 +
ChrX	stalkie_big_nohaplotig	CDS	23606878	23607097	.	-	1	Parent=FBgn0031359.1.mrna1;Target=FBgn0031359.1 93 312 +
ChrX	stalkie_big_nohaplotig	CDS	23644020	23644111	.	-	0	Parent=FBgn0031359.1.mrna1;Target=FBgn0031359.1 1 92 +
ChrX	gffcl	locus	23653981	23654655	.	-	.	ID=RLOC_00001385;geneIDs=FBgn0031454.1.path1;transcripts=FBgn0031454.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23653981	23654655	.	-	.	ID=FBgn0031454.1.mrna1;geneID=FBgn0031454.1.path1;Name=FBgn0031454.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=675;mismatches=0;indels=0;unknowns=0;Target=FBgn0031454.1 675 1 .;locus=RLOC_00001385
ChrX	stalkie_big_nohaplotig	exon	23653981	23654655	100	-	.	Parent=FBgn0031454.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23653981	23654655	.	-	0	Parent=FBgn0031454.1.mrna1
ChrX	gffcl	locus	23654690	23655139	.	-	.	ID=RLOC_00001386;geneIDs=FBgn0031455.1.path1;transcripts=FBgn0031455.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23654690	23655139	.	-	.	ID=FBgn0031455.1.mrna1;geneID=FBgn0031455.1.path1;Name=FBgn0031455.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=448;mismatches=2;indels=0;unknowns=0;Target=FBgn0031455.1 450 1 .;locus=RLOC_00001386
ChrX	stalkie_big_nohaplotig	exon	23654690	23655139	99	-	.	Parent=FBgn0031455.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23654690	23655139	.	-	0	Parent=FBgn0031455.1.mrna1
ChrX	gffcl	locus	23658540	23661177	.	+	.	ID=RLOC_00001387;geneIDs=comp148716_c0_seq1.path1;transcripts=comp148716_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23658540	23661177	.	+	.	ID=comp148716_c0_seq1.mrna1;geneID=comp148716_c0_seq1.path1;Name=comp148716_c0_seq1;Dir=sensecoverage=94.4;identity=99.9;matches=2582;mismatches=3;indels=0;unknowns=0;Target=comp148716_c0_seq1 1273 1401 +;locus=RLOC_00001387
ChrX	stalkie_big_nohaplotig	exon	23658540	23658689	100	+	.	Parent=comp148716_c0_seq1.mrna1;Target=comp148716_c0_seq1 155 304 +
ChrX	stalkie_big_nohaplotig	exon	23658743	23661177	99	+	.	Parent=comp148716_c0_seq1.mrna1;Target=comp148716_c0_seq1 305 2739 +
ChrX	stalkie_big_nohaplotig	CDS	23659711	23659839	.	+	0	Parent=comp148716_c0_seq1.mrna1
ChrX	gffcl	locus	23662948	23673157	.	.	.	ID=RLOC_00001388;geneIDs=comp47669_c0_seq1.path1,comp135770_c0_seq1.path1,comp155891_c0_seq1.path1;transcripts=comp135770_c0_seq1.mrna1,comp155891_c0_seq1.mrna1,comp47669_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23662948	23670156	.	-	.	ID=comp135770_c0_seq1.mrna1;geneID=comp135770_c0_seq1.path1;Name=comp135770_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=1119;mismatches=3;indels=0;unknowns=0;locus=RLOC_00001388
ChrX	stalkie_big_nohaplotig	exon	23662948	23663085	97	-	.	Parent=comp135770_c0_seq1.mrna1;Target=comp135770_c0_seq1 985 1122 +
ChrX	stalkie_big_nohaplotig	exon	23665452	23665617	100	-	.	Parent=comp135770_c0_seq1.mrna1;Target=comp135770_c0_seq1 819 984 +
ChrX	stalkie_big_nohaplotig	exon	23669277	23669537	100	-	.	Parent=comp135770_c0_seq1.mrna1;Target=comp135770_c0_seq1 558 818 +
ChrX	stalkie_big_nohaplotig	exon	23669600	23670156	100	-	.	Parent=comp135770_c0_seq1.mrna1;Target=comp135770_c0_seq1 1 557 +
ChrX	stalkie_big_nohaplotig	CDS	23663036	23663085	.	-	2	Parent=comp135770_c0_seq1.mrna1;Target=comp135770_c0_seq1 985 1034 +
ChrX	stalkie_big_nohaplotig	CDS	23665452	23665617	.	-	0	Parent=comp135770_c0_seq1.mrna1;Target=comp135770_c0_seq1 819 984 +
ChrX	stalkie_big_nohaplotig	CDS	23669277	23669507	.	-	0	Parent=comp135770_c0_seq1.mrna1;Target=comp135770_c0_seq1 588 818 +
ChrX	stalkie_big_nohaplotig	mRNA	23664665	23665475	.	+	.	ID=comp155891_c0_seq1.mrna1;geneID=comp155891_c0_seq1.path1;Name=comp155891_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.0;matches=810;mismatches=1;indels=24;unknowns=0;Target=comp155891_c0_seq1 835 1 .;CDS_Target=comp155891_c0_seq1 53 3 .;locus=RLOC_00001388
ChrX	stalkie_big_nohaplotig	exon	23664665	23665475	97	+	.	Parent=comp155891_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23664667	23664717	.	+	0	Parent=comp155891_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23669516	23673157	.	-	.	ID=comp47669_c0_seq1.mrna1;geneID=comp47669_c0_seq1.path1;Name=comp47669_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=450;mismatches=1;indels=0;unknowns=0;Target=comp47669_c0_seq1 117 191 +;locus=RLOC_00001388
ChrX	stalkie_big_nohaplotig	exon	23669516	23669537	100	-	.	Parent=comp47669_c0_seq1.mrna1;Target=comp47669_c0_seq1 430 451 +
ChrX	stalkie_big_nohaplotig	exon	23672729	23673157	99	-	.	Parent=comp47669_c0_seq1.mrna1;Target=comp47669_c0_seq1 1 429 +
ChrX	stalkie_big_nohaplotig	CDS	23672967	23673041	.	-	0	Parent=comp47669_c0_seq1.mrna1
ChrX	gffcl	locus	23664070	23664549	.	-	.	ID=RLOC_00001389;geneIDs=comp150629_c0_seq1.path1;transcripts=comp150629_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23664070	23664549	.	-	.	ID=comp150629_c0_seq1.mrna1;geneID=comp150629_c0_seq1.path1;Name=comp150629_c0_seq1;Dir=indeterminatecoverage=87.6;identity=95.4;matches=458;mismatches=14;indels=8;unknowns=0;Target=comp150629_c0_seq1 538 67 .;CDS_Target=comp150629_c0_seq1 473 345 .;locus=RLOC_00001389
ChrX	stalkie_big_nohaplotig	exon	23664070	23664549	95	-	.	Parent=comp150629_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23664135	23664263	.	-	0	Parent=comp150629_c0_seq1.mrna1
ChrX	gffcl	locus	23703866	23704872	.	+	.	ID=RLOC_00001390;geneIDs=FBgn0031980.1.path1;transcripts=FBgn0031980.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23703866	23704872	.	+	.	ID=FBgn0031980.1.mrna1;geneID=FBgn0031980.1.path1;Name=FBgn0031980.1;Dir=sensecoverage=100.0;identity=100.0;matches=387;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001390
ChrX	stalkie_big_nohaplotig	exon	23703866	23703943	100	+	.	Parent=FBgn0031980.1.mrna1;Target=FBgn0031980.1 1 78 +
ChrX	stalkie_big_nohaplotig	exon	23704185	23704358	100	+	.	Parent=FBgn0031980.1.mrna1;Target=FBgn0031980.1 79 252 +
ChrX	stalkie_big_nohaplotig	exon	23704738	23704872	100	+	.	Parent=FBgn0031980.1.mrna1;Target=FBgn0031980.1 253 387 +
ChrX	stalkie_big_nohaplotig	CDS	23703866	23703943	.	+	0	Parent=FBgn0031980.1.mrna1;Target=FBgn0031980.1 1 78 +
ChrX	stalkie_big_nohaplotig	CDS	23704185	23704358	.	+	0	Parent=FBgn0031980.1.mrna1;Target=FBgn0031980.1 79 252 +
ChrX	stalkie_big_nohaplotig	CDS	23704738	23704872	.	+	0	Parent=FBgn0031980.1.mrna1;Target=FBgn0031980.1 253 387 +
ChrX	gffcl	locus	23707765	23708560	.	-	.	ID=RLOC_00001391;geneIDs=FBgn0031979.1.path1;transcripts=FBgn0031979.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23707765	23708560	.	-	.	ID=FBgn0031979.1.mrna1;geneID=FBgn0031979.1.path1;Name=FBgn0031979.1;Dir=sensecoverage=100.0;identity=99.8;matches=593;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001391
ChrX	stalkie_big_nohaplotig	exon	23707765	23707804	100	-	.	Parent=FBgn0031979.1.mrna1;Target=FBgn0031979.1 555 594 +
ChrX	stalkie_big_nohaplotig	exon	23707867	23708174	100	-	.	Parent=FBgn0031979.1.mrna1;Target=FBgn0031979.1 247 554 +
ChrX	stalkie_big_nohaplotig	exon	23708238	23708402	100	-	.	Parent=FBgn0031979.1.mrna1;Target=FBgn0031979.1 82 246 +
ChrX	stalkie_big_nohaplotig	exon	23708480	23708560	98	-	.	Parent=FBgn0031979.1.mrna1;Target=FBgn0031979.1 1 81 +
ChrX	stalkie_big_nohaplotig	CDS	23707765	23707804	.	-	1	Parent=FBgn0031979.1.mrna1;Target=FBgn0031979.1 555 594 +
ChrX	stalkie_big_nohaplotig	CDS	23707867	23708174	.	-	0	Parent=FBgn0031979.1.mrna1;Target=FBgn0031979.1 247 554 +
ChrX	stalkie_big_nohaplotig	CDS	23708238	23708402	.	-	0	Parent=FBgn0031979.1.mrna1;Target=FBgn0031979.1 82 246 +
ChrX	stalkie_big_nohaplotig	CDS	23708480	23708560	.	-	0	Parent=FBgn0031979.1.mrna1;Target=FBgn0031979.1 1 81 +
ChrX	gffcl	locus	23747715	23751644	.	+	.	ID=RLOC_00001392;geneIDs=FBgn0025697.2.path1;transcripts=FBgn0025697.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23747715	23751644	.	+	.	ID=FBgn0025697.2.mrna1;geneID=FBgn0025697.2.path1;Name=FBgn0025697.2;Dir=sensecoverage=100.0;identity=99.9;matches=1703;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001392
ChrX	stalkie_big_nohaplotig	exon	23747715	23747879	100	+	.	Parent=FBgn0025697.2.mrna1;Target=FBgn0025697.2 1 165 +
ChrX	stalkie_big_nohaplotig	exon	23749687	23749992	100	+	.	Parent=FBgn0025697.2.mrna1;Target=FBgn0025697.2 166 471 +
ChrX	stalkie_big_nohaplotig	exon	23750061	23750276	100	+	.	Parent=FBgn0025697.2.mrna1;Target=FBgn0025697.2 472 687 +
ChrX	stalkie_big_nohaplotig	exon	23750510	23750813	100	+	.	Parent=FBgn0025697.2.mrna1;Target=FBgn0025697.2 688 991 +
ChrX	stalkie_big_nohaplotig	exon	23750872	23751148	100	+	.	Parent=FBgn0025697.2.mrna1;Target=FBgn0025697.2 992 1268 +
ChrX	stalkie_big_nohaplotig	exon	23751209	23751644	99	+	.	Parent=FBgn0025697.2.mrna1;Target=FBgn0025697.2 1269 1704 +
ChrX	stalkie_big_nohaplotig	CDS	23747715	23747879	.	+	0	Parent=FBgn0025697.2.mrna1;Target=FBgn0025697.2 1 165 +
ChrX	stalkie_big_nohaplotig	CDS	23749687	23749992	.	+	0	Parent=FBgn0025697.2.mrna1;Target=FBgn0025697.2 166 471 +
ChrX	stalkie_big_nohaplotig	CDS	23750061	23750276	.	+	0	Parent=FBgn0025697.2.mrna1;Target=FBgn0025697.2 472 687 +
ChrX	stalkie_big_nohaplotig	CDS	23750510	23750813	.	+	0	Parent=FBgn0025697.2.mrna1;Target=FBgn0025697.2 688 991 +
ChrX	stalkie_big_nohaplotig	CDS	23750872	23751148	.	+	2	Parent=FBgn0025697.2.mrna1;Target=FBgn0025697.2 992 1268 +
ChrX	stalkie_big_nohaplotig	CDS	23751209	23751644	.	+	1	Parent=FBgn0025697.2.mrna1;Target=FBgn0025697.2 1269 1704 +
ChrX	gffcl	locus	23752808	23753575	.	+	.	ID=RLOC_00001393;geneIDs=comp149281_c0_seq1.path1;transcripts=comp149281_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23752808	23753575	.	+	.	ID=comp149281_c0_seq1.mrna1;geneID=comp149281_c0_seq1.path1;Name=comp149281_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=767;mismatches=1;indels=0;unknowns=0;Target=comp149281_c0_seq1 768 1 .;CDS_Target=comp149281_c0_seq1 557 456 .;locus=RLOC_00001393
ChrX	stalkie_big_nohaplotig	exon	23752808	23753575	99	+	.	Parent=comp149281_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23753263	23753364	.	+	0	Parent=comp149281_c0_seq1.mrna1
ChrX	gffcl	locus	23753978	23754796	.	+	.	ID=RLOC_00001394;geneIDs=comp150909_c0_seq1.path1;transcripts=comp150909_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23753978	23754796	.	+	.	ID=comp150909_c0_seq1.mrna1;geneID=comp150909_c0_seq1.path1;Name=comp150909_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=816;mismatches=3;indels=0;unknowns=0;Target=comp150909_c0_seq1 819 1 .;CDS_Target=comp150909_c0_seq1 246 118 .;locus=RLOC_00001394
ChrX	stalkie_big_nohaplotig	exon	23753978	23754796	99	+	.	Parent=comp150909_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23754095	23754223	.	+	0	Parent=comp150909_c0_seq1.mrna1
ChrX	gffcl	locus	23755419	23756645	.	-	.	ID=RLOC_00001395;geneIDs=FBgn0039876.2.path1;transcripts=FBgn0039876.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23755419	23756645	.	-	.	ID=FBgn0039876.2.mrna1;geneID=FBgn0039876.2.path1;Name=FBgn0039876.2;Dir=sensecoverage=100.0;identity=100.0;matches=972;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001395
ChrX	stalkie_big_nohaplotig	exon	23755419	23755570	100	-	.	Parent=FBgn0039876.2.mrna1;Target=FBgn0039876.2 821 972 +
ChrX	stalkie_big_nohaplotig	exon	23755630	23755761	100	-	.	Parent=FBgn0039876.2.mrna1;Target=FBgn0039876.2 689 820 +
ChrX	stalkie_big_nohaplotig	exon	23755835	23756001	100	-	.	Parent=FBgn0039876.2.mrna1;Target=FBgn0039876.2 522 688 +
ChrX	stalkie_big_nohaplotig	exon	23756061	23756273	100	-	.	Parent=FBgn0039876.2.mrna1;Target=FBgn0039876.2 309 521 +
ChrX	stalkie_big_nohaplotig	exon	23756338	23756645	100	-	.	Parent=FBgn0039876.2.mrna1;Target=FBgn0039876.2 1 308 +
ChrX	stalkie_big_nohaplotig	CDS	23755419	23755570	.	-	2	Parent=FBgn0039876.2.mrna1;Target=FBgn0039876.2 821 972 +
ChrX	stalkie_big_nohaplotig	CDS	23755630	23755761	.	-	2	Parent=FBgn0039876.2.mrna1;Target=FBgn0039876.2 689 820 +
ChrX	stalkie_big_nohaplotig	CDS	23755835	23756001	.	-	1	Parent=FBgn0039876.2.mrna1;Target=FBgn0039876.2 522 688 +
ChrX	stalkie_big_nohaplotig	CDS	23756061	23756273	.	-	1	Parent=FBgn0039876.2.mrna1;Target=FBgn0039876.2 309 521 +
ChrX	stalkie_big_nohaplotig	CDS	23756338	23756645	.	-	0	Parent=FBgn0039876.2.mrna1;Target=FBgn0039876.2 1 308 +
ChrX	gffcl	locus	23791715	23795706	.	+	.	ID=RLOC_00001396;geneIDs=FBgn0025697.1.path1;transcripts=FBgn0025697.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23791715	23795706	.	+	.	ID=FBgn0025697.1.mrna1;geneID=FBgn0025697.1.path1;Name=FBgn0025697.1;Dir=sensecoverage=100.0;identity=100.0;matches=1674;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001396
ChrX	stalkie_big_nohaplotig	exon	23791715	23791861	100	+	.	Parent=FBgn0025697.1.mrna1;Target=FBgn0025697.1 1 147 +
ChrX	stalkie_big_nohaplotig	exon	23791927	23792232	100	+	.	Parent=FBgn0025697.1.mrna1;Target=FBgn0025697.1 148 453 +
ChrX	stalkie_big_nohaplotig	exon	23792308	23792523	100	+	.	Parent=FBgn0025697.1.mrna1;Target=FBgn0025697.1 454 669 +
ChrX	stalkie_big_nohaplotig	exon	23794576	23794879	100	+	.	Parent=FBgn0025697.1.mrna1;Target=FBgn0025697.1 670 973 +
ChrX	stalkie_big_nohaplotig	exon	23794941	23795217	100	+	.	Parent=FBgn0025697.1.mrna1;Target=FBgn0025697.1 974 1250 +
ChrX	stalkie_big_nohaplotig	exon	23795283	23795706	100	+	.	Parent=FBgn0025697.1.mrna1;Target=FBgn0025697.1 1251 1674 +
ChrX	stalkie_big_nohaplotig	CDS	23791715	23791861	.	+	0	Parent=FBgn0025697.1.mrna1;Target=FBgn0025697.1 1 147 +
ChrX	stalkie_big_nohaplotig	CDS	23791927	23792232	.	+	0	Parent=FBgn0025697.1.mrna1;Target=FBgn0025697.1 148 453 +
ChrX	stalkie_big_nohaplotig	CDS	23792308	23792523	.	+	0	Parent=FBgn0025697.1.mrna1;Target=FBgn0025697.1 454 669 +
ChrX	stalkie_big_nohaplotig	CDS	23794576	23794879	.	+	0	Parent=FBgn0025697.1.mrna1;Target=FBgn0025697.1 670 973 +
ChrX	stalkie_big_nohaplotig	CDS	23794941	23795217	.	+	2	Parent=FBgn0025697.1.mrna1;Target=FBgn0025697.1 974 1250 +
ChrX	stalkie_big_nohaplotig	CDS	23795283	23795706	.	+	1	Parent=FBgn0025697.1.mrna1;Target=FBgn0025697.1 1251 1674 +
ChrX	gffcl	locus	23797281	23797781	.	-	.	ID=RLOC_00001397;geneIDs=comp153785_c0_seq1.path1;transcripts=comp153785_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23797281	23797781	.	-	.	ID=comp153785_c0_seq1.mrna1;geneID=comp153785_c0_seq1.path1;Name=comp153785_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=439;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001397
ChrX	stalkie_big_nohaplotig	exon	23797281	23797534	100	-	.	Parent=comp153785_c0_seq1.mrna1;Target=comp153785_c0_seq1 186 439 +
ChrX	stalkie_big_nohaplotig	exon	23797597	23797781	100	-	.	Parent=comp153785_c0_seq1.mrna1;Target=comp153785_c0_seq1 1 185 +
ChrX	stalkie_big_nohaplotig	CDS	23797436	23797534	.	-	0	Parent=comp153785_c0_seq1.mrna1;Target=comp153785_c0_seq1 186 284 +
ChrX	stalkie_big_nohaplotig	CDS	23797597	23797617	.	-	0	Parent=comp153785_c0_seq1.mrna1;Target=comp153785_c0_seq1 165 185 +
ChrX	gffcl	locus	23798213	23799522	.	+	.	ID=RLOC_00001398;geneIDs=comp155499_c0_seq1.path1;transcripts=comp155499_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23798213	23799522	.	+	.	ID=comp155499_c0_seq1.mrna1;geneID=comp155499_c0_seq1.path1;Name=comp155499_c0_seq1;Dir=sensecoverage=100.0;identity=98.8;matches=908;mismatches=8;indels=3;unknowns=0;Target=comp155499_c0_seq1 3 281 +;locus=RLOC_00001398
ChrX	stalkie_big_nohaplotig	exon	23798213	23798553	99	+	.	Parent=comp155499_c0_seq1.mrna1;Target=comp155499_c0_seq1 1 341 +
ChrX	stalkie_big_nohaplotig	exon	23798626	23798694	100	+	.	Parent=comp155499_c0_seq1.mrna1;Target=comp155499_c0_seq1 342 410 +
ChrX	stalkie_big_nohaplotig	exon	23798761	23798870	100	+	.	Parent=comp155499_c0_seq1.mrna1;Target=comp155499_c0_seq1 411 520 +
ChrX	stalkie_big_nohaplotig	exon	23798936	23798947	100	+	.	Parent=comp155499_c0_seq1.mrna1;Target=comp155499_c0_seq1 521 532 +
ChrX	stalkie_big_nohaplotig	exon	23799002	23799163	98	+	.	Parent=comp155499_c0_seq1.mrna1;Target=comp155499_c0_seq1 533 694 +
ChrX	stalkie_big_nohaplotig	exon	23799301	23799522	96	+	.	Parent=comp155499_c0_seq1.mrna1;Target=comp155499_c0_seq1 695 919 +
ChrX	stalkie_big_nohaplotig	CDS	23798215	23798493	.	+	0	Parent=comp155499_c0_seq1.mrna1
ChrX	gffcl	locus	23823923	23834275	.	+	.	ID=RLOC_00001399;geneIDs=FBgn0031969.1.path1;transcripts=FBgn0031969.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23823923	23834275	.	+	.	ID=FBgn0031969.1.mrna1;geneID=FBgn0031969.1.path1;Name=FBgn0031969.1;Dir=sensecoverage=99.2;identity=99.9;matches=1701;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001399
ChrX	stalkie_big_nohaplotig	exon	23823923	23824112	100	+	.	Parent=FBgn0031969.1.mrna1;Target=FBgn0031969.1 15 204 +
ChrX	stalkie_big_nohaplotig	exon	23832467	23832775	100	+	.	Parent=FBgn0031969.1.mrna1;Target=FBgn0031969.1 205 513 +
ChrX	stalkie_big_nohaplotig	exon	23832844	23833059	100	+	.	Parent=FBgn0031969.1.mrna1;Target=FBgn0031969.1 514 729 +
ChrX	stalkie_big_nohaplotig	exon	23833134	23833437	100	+	.	Parent=FBgn0031969.1.mrna1;Target=FBgn0031969.1 730 1033 +
ChrX	stalkie_big_nohaplotig	exon	23833516	23833795	100	+	.	Parent=FBgn0031969.1.mrna1;Target=FBgn0031969.1 1034 1313 +
ChrX	stalkie_big_nohaplotig	exon	23833873	23834275	99	+	.	Parent=FBgn0031969.1.mrna1;Target=FBgn0031969.1 1314 1716 +
ChrX	stalkie_big_nohaplotig	CDS	23823924	23824112	.	+	0	Parent=FBgn0031969.1.mrna1;Target=FBgn0031969.1 16 204 +
ChrX	stalkie_big_nohaplotig	CDS	23832467	23832775	.	+	0	Parent=FBgn0031969.1.mrna1;Target=FBgn0031969.1 205 513 +
ChrX	stalkie_big_nohaplotig	CDS	23832844	23833059	.	+	0	Parent=FBgn0031969.1.mrna1;Target=FBgn0031969.1 514 729 +
ChrX	stalkie_big_nohaplotig	CDS	23833134	23833437	.	+	0	Parent=FBgn0031969.1.mrna1;Target=FBgn0031969.1 730 1033 +
ChrX	stalkie_big_nohaplotig	CDS	23833516	23833795	.	+	2	Parent=FBgn0031969.1.mrna1;Target=FBgn0031969.1 1034 1313 +
ChrX	stalkie_big_nohaplotig	CDS	23833873	23834275	.	+	1	Parent=FBgn0031969.1.mrna1;Target=FBgn0031969.1 1314 1716 +
ChrX	stalkie_big_nohaplotig	mRNA	23840040	23842206	.	-	.	ID=comp734262_c0_seq1.mrna1;geneID=comp734262_c0_seq1.path1;Name=comp734262_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=275;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001400
ChrX	stalkie_big_nohaplotig	exon	23840040	23840061	100	-	.	Parent=comp734262_c0_seq1.mrna1;Target=comp734262_c0_seq1 1 22 -
ChrX	stalkie_big_nohaplotig	exon	23841954	23842206	100	-	.	Parent=comp734262_c0_seq1.mrna1;Target=comp734262_c0_seq1 23 275 -
ChrX	stalkie_big_nohaplotig	CDS	23840042	23840061	.	-	2	Parent=comp734262_c0_seq1.mrna1;Target=comp734262_c0_seq1 3 22 .
ChrX	stalkie_big_nohaplotig	CDS	23841954	23842023	.	-	0	Parent=comp734262_c0_seq1.mrna1;Target=comp734262_c0_seq1 23 92 .
ChrX	gffcl	locus	23839027	23839335	.	+	.	ID=RLOC_00001401;geneIDs=comp118812_c0_seq1.path1;transcripts=comp118812_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23839027	23839335	.	+	.	ID=comp118812_c0_seq1.mrna1;geneID=comp118812_c0_seq1.path1;Name=comp118812_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.0;matches=306;mismatches=3;indels=0;unknowns=0;Target=comp118812_c0_seq1 309 1 .;CDS_Target=comp118812_c0_seq1 224 96 .;locus=RLOC_00001401
ChrX	stalkie_big_nohaplotig	exon	23839027	23839335	99	+	.	Parent=comp118812_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23839122	23839250	.	+	0	Parent=comp118812_c0_seq1.mrna1
ChrX	gffcl	locus	23840199	23841747	.	-	.	ID=RLOC_00001402;geneIDs=comp159313_c0_seq1.path1;transcripts=comp159313_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23840199	23841747	.	-	.	ID=comp159313_c0_seq1.mrna1;geneID=comp159313_c0_seq1.path1;Name=comp159313_c0_seq1;Dir=indeterminatecoverage=98.4;identity=97.8;matches=1535;mismatches=13;indels=22;unknowns=0;Target=comp159313_c0_seq1 1593 25 .;CDS_Target=comp159313_c0_seq1 1360 1235 .;locus=RLOC_00001402
ChrX	stalkie_big_nohaplotig	exon	23840199	23841747	97	-	.	Parent=comp159313_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23840433	23840558	.	-	0	Parent=comp159313_c0_seq1.mrna1
ChrX	gffcl	locus	23846845	23854819	.	-	.	ID=RLOC_00001403;geneIDs=FBgn0032467.1.path1;transcripts=FBgn0032467.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23846845	23854819	.	-	.	ID=FBgn0032467.1.mrna1;geneID=FBgn0032467.1.path1;Name=FBgn0032467.1;Dir=sensecoverage=100.0;identity=99.7;matches=3405;mismatches=8;indels=1;unknowns=0;Target=FBgn0032467.1 3 125 +;locus=RLOC_00001403
ChrX	stalkie_big_nohaplotig	exon	23846845	23847140	100	-	.	Parent=FBgn0032467.1.mrna1;Target=FBgn0032467.1 3119 3414 +
ChrX	stalkie_big_nohaplotig	exon	23847207	23847549	100	-	.	Parent=FBgn0032467.1.mrna1;Target=FBgn0032467.1 2776 3118 +
ChrX	stalkie_big_nohaplotig	exon	23850147	23850293	100	-	.	Parent=FBgn0032467.1.mrna1;Target=FBgn0032467.1 2629 2775 +
ChrX	stalkie_big_nohaplotig	exon	23850362	23850539	100	-	.	Parent=FBgn0032467.1.mrna1;Target=FBgn0032467.1 2451 2628 +
ChrX	stalkie_big_nohaplotig	exon	23850621	23850733	100	-	.	Parent=FBgn0032467.1.mrna1;Target=FBgn0032467.1 2338 2450 +
ChrX	stalkie_big_nohaplotig	exon	23850805	23851201	99	-	.	Parent=FBgn0032467.1.mrna1;Target=FBgn0032467.1 1941 2337 +
ChrX	stalkie_big_nohaplotig	exon	23852718	23853289	100	-	.	Parent=FBgn0032467.1.mrna1;Target=FBgn0032467.1 1369 1940 +
ChrX	stalkie_big_nohaplotig	exon	23853387	23854102	99	-	.	Parent=FBgn0032467.1.mrna1;Target=FBgn0032467.1 653 1368 +
ChrX	stalkie_big_nohaplotig	exon	23854169	23854819	99	-	.	Parent=FBgn0032467.1.mrna1;Target=FBgn0032467.1 1 652 +
ChrX	stalkie_big_nohaplotig	CDS	23854696	23854817	.	-	0	Parent=FBgn0032467.1.mrna1
ChrX	gffcl	locus	23854904	23856283	.	+	.	ID=RLOC_00001404;geneIDs=comp149595_c0_seq1.path1;transcripts=comp149595_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23854904	23856283	.	+	.	ID=comp149595_c0_seq1.mrna1;geneID=comp149595_c0_seq1.path1;Name=comp149595_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1380;mismatches=0;indels=2;unknowns=0;Target=comp149595_c0_seq1 1382 1 .;CDS_Target=comp149595_c0_seq1 1252 1106 .;locus=RLOC_00001404
ChrX	stalkie_big_nohaplotig	exon	23854904	23856283	99	+	.	Parent=comp149595_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23856007	23856153	.	+	0	Parent=comp149595_c0_seq1.mrna1
ChrX	gffcl	locus	23875713	23876422	.	-	.	ID=RLOC_00001405;geneIDs=FBgn0032000.1.path1;transcripts=FBgn0032000.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23875713	23876422	.	-	.	ID=FBgn0032000.1.mrna1;geneID=FBgn0032000.1.path1;Name=FBgn0032000.1;Dir=sensecoverage=100.0;identity=99.8;matches=653;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001405
ChrX	stalkie_big_nohaplotig	exon	23875713	23876280	99	-	.	Parent=FBgn0032000.1.mrna1;Target=FBgn0032000.1 87 654 +
ChrX	stalkie_big_nohaplotig	exon	23876337	23876422	100	-	.	Parent=FBgn0032000.1.mrna1;Target=FBgn0032000.1 1 86 +
ChrX	stalkie_big_nohaplotig	CDS	23875713	23876280	.	-	1	Parent=FBgn0032000.1.mrna1;Target=FBgn0032000.1 87 654 +
ChrX	stalkie_big_nohaplotig	CDS	23876337	23876422	.	-	0	Parent=FBgn0032000.1.mrna1;Target=FBgn0032000.1 1 86 +
ChrX	gffcl	locus	23883278	23883892	.	+	.	ID=RLOC_00001407;geneIDs=FBgn0032002.1.path1;transcripts=FBgn0032002.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23883278	23883892	.	+	.	ID=FBgn0032002.1.mrna1;geneID=FBgn0032002.1.path1;Name=FBgn0032002.1;Dir=sensecoverage=100.0;identity=100.0;matches=492;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001407
ChrX	stalkie_big_nohaplotig	exon	23883278	23883353	100	+	.	Parent=FBgn0032002.1.mrna1;Target=FBgn0032002.1 1 76 +
ChrX	stalkie_big_nohaplotig	exon	23883477	23883892	100	+	.	Parent=FBgn0032002.1.mrna1;Target=FBgn0032002.1 77 492 +
ChrX	stalkie_big_nohaplotig	CDS	23883278	23883353	.	+	0	Parent=FBgn0032002.1.mrna1;Target=FBgn0032002.1 1 76 +
ChrX	stalkie_big_nohaplotig	CDS	23883477	23883892	.	+	2	Parent=FBgn0032002.1.mrna1;Target=FBgn0032002.1 77 492 +
ChrX	gffcl	locus	23888200	23888825	.	+	.	ID=RLOC_00001408;geneIDs=comp116657_c0_seq1.path1;transcripts=comp116657_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23888200	23888825	.	+	.	ID=comp116657_c0_seq1.mrna1;geneID=comp116657_c0_seq1.path1;Name=comp116657_c0_seq1;Dir=indeterminatecoverage=97.7;identity=100.0;matches=626;mismatches=0;indels=0;unknowns=0;Target=comp116657_c0_seq1 641 16 .;CDS_Target=comp116657_c0_seq1 165 16 .;locus=RLOC_00001408
ChrX	stalkie_big_nohaplotig	exon	23888200	23888825	100	+	.	Parent=comp116657_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23888200	23888349	.	+	0	Parent=comp116657_c0_seq1.mrna1
ChrX	gffcl	locus	23889161	23900104	.	-	.	ID=RLOC_00001409;geneIDs=FBgn0032005.1.path1,comp118945_c0_seq1.path1;transcripts=FBgn0032005.1.mrna1,comp118945_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23889161	23896972	.	-	.	ID=FBgn0032005.1.mrna1;geneID=FBgn0032005.1.path1;Name=FBgn0032005.1;Dir=sensecoverage=99.6;identity=99.8;matches=1351;mismatches=3;indels=0;unknowns=0;locus=RLOC_00001409
ChrX	stalkie_big_nohaplotig	exon	23889161	23889251	100	-	.	Parent=FBgn0032005.1.mrna1;Target=FBgn0032005.1 1269 1359 +
ChrX	stalkie_big_nohaplotig	exon	23889313	23889422	100	-	.	Parent=FBgn0032005.1.mrna1;Target=FBgn0032005.1 1159 1268 +
ChrX	stalkie_big_nohaplotig	exon	23893548	23893565	100	-	.	Parent=FBgn0032005.1.mrna1;Target=FBgn0032005.1 1141 1158 +
ChrX	stalkie_big_nohaplotig	exon	23893900	23894082	100	-	.	Parent=FBgn0032005.1.mrna1;Target=FBgn0032005.1 958 1140 +
ChrX	stalkie_big_nohaplotig	exon	23895161	23895605	99	-	.	Parent=FBgn0032005.1.mrna1;Target=FBgn0032005.1 513 957 +
ChrX	stalkie_big_nohaplotig	exon	23895671	23895792	99	-	.	Parent=FBgn0032005.1.mrna1;Target=FBgn0032005.1 391 512 +
ChrX	stalkie_big_nohaplotig	exon	23896588	23896972	99	-	.	Parent=FBgn0032005.1.mrna1;Target=FBgn0032005.1 6 390 +
ChrX	stalkie_big_nohaplotig	CDS	23889161	23889251	.	-	1	Parent=FBgn0032005.1.mrna1;Target=FBgn0032005.1 1269 1359 +
ChrX	stalkie_big_nohaplotig	CDS	23889313	23889422	.	-	0	Parent=FBgn0032005.1.mrna1;Target=FBgn0032005.1 1159 1268 +
ChrX	stalkie_big_nohaplotig	CDS	23893548	23893565	.	-	0	Parent=FBgn0032005.1.mrna1;Target=FBgn0032005.1 1141 1158 +
ChrX	stalkie_big_nohaplotig	CDS	23893900	23894082	.	-	0	Parent=FBgn0032005.1.mrna1;Target=FBgn0032005.1 958 1140 +
ChrX	stalkie_big_nohaplotig	CDS	23895161	23895605	.	-	1	Parent=FBgn0032005.1.mrna1;Target=FBgn0032005.1 513 957 +
ChrX	stalkie_big_nohaplotig	CDS	23895671	23895792	.	-	0	Parent=FBgn0032005.1.mrna1;Target=FBgn0032005.1 391 512 +
ChrX	stalkie_big_nohaplotig	CDS	23896588	23896971	.	-	0	Parent=FBgn0032005.1.mrna1;Target=FBgn0032005.1 7 390 +
ChrX	stalkie_big_nohaplotig	mRNA	23896950	23900104	.	-	.	ID=comp118945_c0_seq1.mrna1;geneID=comp118945_c0_seq1.path1;Name=comp118945_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=259;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001409
ChrX	stalkie_big_nohaplotig	exon	23896950	23896971	100	-	.	Parent=comp118945_c0_seq1.mrna1;Target=comp118945_c0_seq1 239 260 +
ChrX	stalkie_big_nohaplotig	exon	23899867	23900104	99	-	.	Parent=comp118945_c0_seq1.mrna1;Target=comp118945_c0_seq1 1 238 +
ChrX	stalkie_big_nohaplotig	CDS	23896951	23896971	.	-	0	Parent=comp118945_c0_seq1.mrna1;Target=comp118945_c0_seq1 239 259 +
ChrX	stalkie_big_nohaplotig	CDS	23899867	23899962	.	-	0	Parent=comp118945_c0_seq1.mrna1;Target=comp118945_c0_seq1 143 238 +
ChrX	gffcl	locus	23889533	23890096	.	+	.	ID=RLOC_00001410;geneIDs=comp136024_c0_seq1.path1;transcripts=comp136024_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23889533	23890096	.	+	.	ID=comp136024_c0_seq1.mrna1;geneID=comp136024_c0_seq1.path1;Name=comp136024_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=476;mismatches=0;indels=0;unknowns=0;Target=comp136024_c0_seq1 92 3 .;locus=RLOC_00001410
ChrX	stalkie_big_nohaplotig	exon	23889533	23889866	100	+	.	Parent=comp136024_c0_seq1.mrna1;Target=comp136024_c0_seq1 334 1 .
ChrX	stalkie_big_nohaplotig	exon	23889955	23890096	100	+	.	Parent=comp136024_c0_seq1.mrna1;Target=comp136024_c0_seq1 476 335 .
ChrX	stalkie_big_nohaplotig	CDS	23889535	23889624	.	+	0	Parent=comp136024_c0_seq1.mrna1
ChrX	gffcl	locus	23890355	23890673	.	-	.	ID=RLOC_00001411;geneIDs=comp141044_c0_seq1.path1;transcripts=comp141044_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23890355	23890673	.	-	.	ID=comp141044_c0_seq1.mrna1;geneID=comp141044_c0_seq1.path1;Name=comp141044_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=319;mismatches=0;indels=0;unknowns=0;Target=comp141044_c0_seq1 319 1 .;CDS_Target=comp141044_c0_seq1 313 200 .;locus=RLOC_00001411
ChrX	stalkie_big_nohaplotig	exon	23890355	23890673	100	-	.	Parent=comp141044_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23890361	23890474	.	-	0	Parent=comp141044_c0_seq1.mrna1
ChrX	gffcl	locus	23892113	23892949	.	-	.	ID=RLOC_00001412;geneIDs=comp148090_c1_seq1.path1;transcripts=comp148090_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23892113	23892949	.	-	.	ID=comp148090_c1_seq1.mrna1;geneID=comp148090_c1_seq1.path1;Name=comp148090_c1_seq1;Dir=indeterminatecoverage=99.8;identity=99.6;matches=834;mismatches=3;indels=0;unknowns=0;Target=comp148090_c1_seq1 837 1 .;CDS_Target=comp148090_c1_seq1 146 3 .;locus=RLOC_00001412
ChrX	stalkie_big_nohaplotig	exon	23892113	23892949	99	-	.	Parent=comp148090_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23892804	23892947	.	-	0	Parent=comp148090_c1_seq1.mrna1
ChrX	gffcl	locus	23912901	23913861	.	+	.	ID=RLOC_00001413;geneIDs=FBgn0020368.path1;transcripts=FBgn0020368.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23912901	23913861	.	+	.	ID=FBgn0020368.mrna1;geneID=FBgn0020368.path1;Name=FBgn0020368;Dir=sensecoverage=100.0;identity=100.0;matches=894;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001413
ChrX	stalkie_big_nohaplotig	exon	23912901	23913104	100	+	.	Parent=FBgn0020368.mrna1;Target=FBgn0020368 1 204 +
ChrX	stalkie_big_nohaplotig	exon	23913172	23913861	100	+	.	Parent=FBgn0020368.mrna1;Target=FBgn0020368 205 894 +
ChrX	stalkie_big_nohaplotig	CDS	23912901	23913104	.	+	0	Parent=FBgn0020368.mrna1;Target=FBgn0020368 1 204 +
ChrX	stalkie_big_nohaplotig	CDS	23913172	23913861	.	+	0	Parent=FBgn0020368.mrna1;Target=FBgn0020368 205 894 +
ChrX	gffcl	locus	23917752	23949251	.	+	.	ID=RLOC_00001414;geneIDs=FBgn0032465.2.path1;transcripts=FBgn0032465.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23917752	23949251	.	+	.	ID=FBgn0032465.2.mrna1;geneID=FBgn0032465.2.path1;Name=FBgn0032465.2;Dir=sensecoverage=100.0;identity=99.0;matches=781;mismatches=8;indels=0;unknowns=0;locus=RLOC_00001414
ChrX	stalkie_big_nohaplotig	exon	23917752	23917795	95	+	.	Parent=FBgn0032465.2.mrna1;Target=FBgn0032465.2 1 44 +
ChrX	stalkie_big_nohaplotig	exon	23918202	23918291	97	+	.	Parent=FBgn0032465.2.mrna1;Target=FBgn0032465.2 45 134 +
ChrX	stalkie_big_nohaplotig	exon	23918357	23918520	98	+	.	Parent=FBgn0032465.2.mrna1;Target=FBgn0032465.2 135 298 +
ChrX	stalkie_big_nohaplotig	exon	23918958	23918992	100	+	.	Parent=FBgn0032465.2.mrna1;Target=FBgn0032465.2 299 333 +
ChrX	stalkie_big_nohaplotig	exon	23937439	23937549	100	+	.	Parent=FBgn0032465.2.mrna1;Target=FBgn0032465.2 334 444 +
ChrX	stalkie_big_nohaplotig	exon	23937935	23938119	99	+	.	Parent=FBgn0032465.2.mrna1;Target=FBgn0032465.2 445 629 +
ChrX	stalkie_big_nohaplotig	exon	23949092	23949251	100	+	.	Parent=FBgn0032465.2.mrna1;Target=FBgn0032465.2 630 789 +
ChrX	stalkie_big_nohaplotig	CDS	23917752	23917795	.	+	0	Parent=FBgn0032465.2.mrna1;Target=FBgn0032465.2 1 44 +
ChrX	stalkie_big_nohaplotig	CDS	23918202	23918291	.	+	1	Parent=FBgn0032465.2.mrna1;Target=FBgn0032465.2 45 134 +
ChrX	stalkie_big_nohaplotig	CDS	23918357	23918520	.	+	1	Parent=FBgn0032465.2.mrna1;Target=FBgn0032465.2 135 298 +
ChrX	stalkie_big_nohaplotig	CDS	23918958	23918992	.	+	2	Parent=FBgn0032465.2.mrna1;Target=FBgn0032465.2 299 333 +
ChrX	stalkie_big_nohaplotig	CDS	23937439	23937549	.	+	0	Parent=FBgn0032465.2.mrna1;Target=FBgn0032465.2 334 444 +
ChrX	stalkie_big_nohaplotig	CDS	23937935	23938119	.	+	0	Parent=FBgn0032465.2.mrna1;Target=FBgn0032465.2 445 629 +
ChrX	stalkie_big_nohaplotig	CDS	23949092	23949251	.	+	1	Parent=FBgn0032465.2.mrna1;Target=FBgn0032465.2 630 789 +
ChrX	gffcl	locus	23968037	23968793	.	-	.	ID=RLOC_00001416;geneIDs=comp159450_c1_seq1.path1;transcripts=comp159450_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23968037	23968793	.	-	.	ID=comp159450_c1_seq1.mrna1;geneID=comp159450_c1_seq1.path1;Name=comp159450_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=749;mismatches=8;indels=0;unknowns=0;Target=comp159450_c1_seq1 757 1 .;CDS_Target=comp159450_c1_seq1 528 379 .;locus=RLOC_00001416
ChrX	stalkie_big_nohaplotig	exon	23968037	23968793	98	-	.	Parent=comp159450_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23968266	23968415	.	-	0	Parent=comp159450_c1_seq1.mrna1
ChrX	gffcl	locus	23981722	23982143	.	+	.	ID=RLOC_00001417;geneIDs=comp133492_c0_seq1.path1;transcripts=comp133492_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	23981722	23982143	.	+	.	ID=comp133492_c0_seq1.mrna1;geneID=comp133492_c0_seq1.path1;Name=comp133492_c0_seq1;Dir=indeterminatecoverage=75.2;identity=91.0;matches=384;mismatches=2;indels=36;unknowns=0;Target=comp133492_c0_seq1 386 1 .;CDS_Target=comp133492_c0_seq1 80 3 .;locus=RLOC_00001417
ChrX	stalkie_big_nohaplotig	exon	23981722	23982143	90	+	.	Parent=comp133492_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	23981724	23981801	.	+	0	Parent=comp133492_c0_seq1.mrna1
ChrX	gffcl	locus	24003066	24003822	.	+	.	ID=RLOC_00001419;geneIDs=comp159450_c1_seq1.path2;transcripts=comp159450_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	24003066	24003822	.	+	.	ID=comp159450_c1_seq1.mrna2;geneID=comp159450_c1_seq1.path2;Name=comp159450_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=748;mismatches=9;indels=0;unknowns=0;Target=comp159450_c1_seq1 757 1 .;CDS_Target=comp159450_c1_seq1 528 379 .;locus=RLOC_00001419
ChrX	stalkie_big_nohaplotig	exon	24003066	24003822	98	+	.	Parent=comp159450_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	24003444	24003593	.	+	0	Parent=comp159450_c1_seq1.mrna2
ChrX	gffcl	locus	24010848	24016663	.	+	.	ID=RLOC_00001420;geneIDs=comp121947_c0_seq1.path1;transcripts=comp121947_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24010848	24016663	.	+	.	ID=comp121947_c0_seq1.mrna1;geneID=comp121947_c0_seq1.path1;Name=comp121947_c0_seq1;Dir=sensecoverage=96.1;identity=99.8;matches=661;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001420
ChrX	stalkie_big_nohaplotig	exon	24010848	24010987	100	+	.	Parent=comp121947_c0_seq1.mrna1;Target=comp121947_c0_seq1 26 165 +
ChrX	stalkie_big_nohaplotig	exon	24016064	24016200	100	+	.	Parent=comp121947_c0_seq1.mrna1;Target=comp121947_c0_seq1 166 302 +
ChrX	stalkie_big_nohaplotig	exon	24016279	24016663	99	+	.	Parent=comp121947_c0_seq1.mrna1;Target=comp121947_c0_seq1 303 687 +
ChrX	stalkie_big_nohaplotig	CDS	24010957	24010987	.	+	0	Parent=comp121947_c0_seq1.mrna1;Target=comp121947_c0_seq1 135 165 +
ChrX	stalkie_big_nohaplotig	CDS	24016064	24016200	.	+	2	Parent=comp121947_c0_seq1.mrna1;Target=comp121947_c0_seq1 166 302 +
ChrX	stalkie_big_nohaplotig	CDS	24016279	24016563	.	+	0	Parent=comp121947_c0_seq1.mrna1;Target=comp121947_c0_seq1 303 587 +
ChrX	gffcl	locus	24024228	24026504	.	+	.	ID=RLOC_00001421;geneIDs=FBgn0263598.2.path1;transcripts=FBgn0263598.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24024228	24026504	.	+	.	ID=FBgn0263598.2.mrna1;geneID=FBgn0263598.2.path1;Name=FBgn0263598.2;Dir=sensecoverage=100.0;identity=99.9;matches=2014;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001421
ChrX	stalkie_big_nohaplotig	exon	24024228	24024480	100	+	.	Parent=FBgn0263598.2.mrna1;Target=FBgn0263598.2 1 253 +
ChrX	stalkie_big_nohaplotig	exon	24024561	24025255	99	+	.	Parent=FBgn0263598.2.mrna1;Target=FBgn0263598.2 254 948 +
ChrX	stalkie_big_nohaplotig	exon	24025378	24026355	99	+	.	Parent=FBgn0263598.2.mrna1;Target=FBgn0263598.2 949 1926 +
ChrX	stalkie_big_nohaplotig	exon	24026415	24026504	100	+	.	Parent=FBgn0263598.2.mrna1;Target=FBgn0263598.2 1927 2016 +
ChrX	stalkie_big_nohaplotig	CDS	24024228	24024480	.	+	0	Parent=FBgn0263598.2.mrna1;Target=FBgn0263598.2 1 253 +
ChrX	stalkie_big_nohaplotig	CDS	24024561	24025255	.	+	2	Parent=FBgn0263598.2.mrna1;Target=FBgn0263598.2 254 948 +
ChrX	stalkie_big_nohaplotig	CDS	24025378	24026355	.	+	0	Parent=FBgn0263598.2.mrna1;Target=FBgn0263598.2 949 1926 +
ChrX	stalkie_big_nohaplotig	CDS	24026415	24026504	.	+	0	Parent=FBgn0263598.2.mrna1;Target=FBgn0263598.2 1927 2016 +
ChrX	gffcl	locus	24031666	24034005	.	-	.	ID=RLOC_00001422;geneIDs=FBgn0263598.1.path1;transcripts=FBgn0263598.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24031666	24034005	.	-	.	ID=FBgn0263598.1.mrna1;geneID=FBgn0263598.1.path1;Name=FBgn0263598.1;Dir=sensecoverage=100.0;identity=99.9;matches=1846;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001422
ChrX	stalkie_big_nohaplotig	exon	24031666	24031755	100	-	.	Parent=FBgn0263598.1.mrna1;Target=FBgn0263598.1 1759 1848 +
ChrX	stalkie_big_nohaplotig	exon	24031833	24032810	99	-	.	Parent=FBgn0263598.1.mrna1;Target=FBgn0263598.1 781 1758 +
ChrX	stalkie_big_nohaplotig	exon	24033127	24033824	100	-	.	Parent=FBgn0263598.1.mrna1;Target=FBgn0263598.1 83 780 +
ChrX	stalkie_big_nohaplotig	exon	24033924	24034005	100	-	.	Parent=FBgn0263598.1.mrna1;Target=FBgn0263598.1 1 82 +
ChrX	stalkie_big_nohaplotig	CDS	24031666	24031755	.	-	0	Parent=FBgn0263598.1.mrna1;Target=FBgn0263598.1 1759 1848 +
ChrX	stalkie_big_nohaplotig	CDS	24031833	24032810	.	-	0	Parent=FBgn0263598.1.mrna1;Target=FBgn0263598.1 781 1758 +
ChrX	stalkie_big_nohaplotig	CDS	24033127	24033824	.	-	2	Parent=FBgn0263598.1.mrna1;Target=FBgn0263598.1 83 780 +
ChrX	stalkie_big_nohaplotig	CDS	24033924	24034005	.	-	0	Parent=FBgn0263598.1.mrna1;Target=FBgn0263598.1 1 82 +
ChrX	gffcl	locus	24043826	24044140	.	-	.	ID=RLOC_00001423;geneIDs=comp232122_c0_seq1.path1;transcripts=comp232122_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24043826	24044140	.	-	.	ID=comp232122_c0_seq1.mrna1;geneID=comp232122_c0_seq1.path1;Name=comp232122_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.0;matches=312;mismatches=3;indels=0;unknowns=0;Target=comp232122_c0_seq1 316 2 .;CDS_Target=comp232122_c0_seq1 299 153 .;locus=RLOC_00001423
ChrX	stalkie_big_nohaplotig	exon	24043826	24044140	99	-	.	Parent=comp232122_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	24043843	24043989	.	-	0	Parent=comp232122_c0_seq1.mrna1
ChrX	gffcl	locus	24065756	24066484	.	+	.	ID=RLOC_00001424;geneIDs=comp134900_c0_seq1.path1;transcripts=comp134900_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24065756	24066484	.	+	.	ID=comp134900_c0_seq1.mrna1;geneID=comp134900_c0_seq1.path1;Name=comp134900_c0_seq1;Dir=sensecoverage=98.7;identity=99.8;matches=614;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001424
ChrX	stalkie_big_nohaplotig	exon	24065756	24065937	100	+	.	Parent=comp134900_c0_seq1.mrna1;Target=comp134900_c0_seq1 9 190 +
ChrX	stalkie_big_nohaplotig	exon	24066052	24066484	99	+	.	Parent=comp134900_c0_seq1.mrna1;Target=comp134900_c0_seq1 191 623 +
ChrX	stalkie_big_nohaplotig	CDS	24065830	24065937	.	+	0	Parent=comp134900_c0_seq1.mrna1;Target=comp134900_c0_seq1 83 190 +
ChrX	stalkie_big_nohaplotig	CDS	24066052	24066294	.	+	0	Parent=comp134900_c0_seq1.mrna1;Target=comp134900_c0_seq1 191 433 +
ChrX	gffcl	locus	24120406	24120680	.	-	.	ID=RLOC_00001425;geneIDs=comp158028_c0_seq1.path1;transcripts=comp158028_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24120406	24120680	.	-	.	ID=comp158028_c0_seq1.mrna1;geneID=comp158028_c0_seq1.path1;Name=comp158028_c0_seq1;Dir=indeterminatecoverage=86.2;identity=95.4;matches=267;mismatches=8;indels=5;unknowns=0;Target=comp158028_c0_seq1 325 46 .;CDS_Target=comp158028_c0_seq1 121 65 .;locus=RLOC_00001425
ChrX	stalkie_big_nohaplotig	exon	24120406	24120680	95	-	.	Parent=comp158028_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	24120605	24120661	.	-	0	Parent=comp158028_c0_seq1.mrna1
ChrX	gffcl	locus	24125837	24126700	.	-	.	ID=RLOC_00001426;geneIDs=ORF2280.path1;transcripts=ORF2280.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24125837	24126700	.	-	.	ID=ORF2280.mrna1;geneID=ORF2280.path1;Name=ORF2280;Dir=indeterminatecoverage=98.0;identity=99.3;matches=858;mismatches=6;indels=0;unknowns=0;Target=ORF2280 882 19 .;locus=RLOC_00001426
ChrX	stalkie_big_nohaplotig	exon	24125837	24126700	99	-	.	Parent=ORF2280.mrna1
ChrX	stalkie_big_nohaplotig	CDS	24125837	24126700	.	-	0	Parent=ORF2280.mrna1
ChrX	gffcl	locus	24163304	24165394	.	+	.	ID=RLOC_00001427;geneIDs=comp160599_c0_seq1.path1;transcripts=comp160599_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24163304	24165394	.	+	.	ID=comp160599_c0_seq1.mrna1;geneID=comp160599_c0_seq1.path1;Name=comp160599_c0_seq1;Dir=antisensecoverage=98.7;identity=95.3;matches=1571;mismatches=42;indels=35;unknowns=0;locus=RLOC_00001427
ChrX	stalkie_big_nohaplotig	exon	24163304	24163450	100	+	.	Parent=comp160599_c0_seq1.mrna1;Target=comp160599_c0_seq1 1594 1740 -
ChrX	stalkie_big_nohaplotig	exon	24163560	24163843	100	+	.	Parent=comp160599_c0_seq1.mrna1;Target=comp160599_c0_seq1 1310 1593 -
ChrX	stalkie_big_nohaplotig	exon	24163904	24163970	100	+	.	Parent=comp160599_c0_seq1.mrna1;Target=comp160599_c0_seq1 1243 1309 -
ChrX	stalkie_big_nohaplotig	exon	24164185	24164349	91	+	.	Parent=comp160599_c0_seq1.mrna1;Target=comp160599_c0_seq1 991 1168 -
ChrX	stalkie_big_nohaplotig	exon	24164430	24165394	93	+	.	Parent=comp160599_c0_seq1.mrna1;Target=comp160599_c0_seq1 24 980 -
ChrX	stalkie_big_nohaplotig	CDS	24163304	24163450	.	+	0	Parent=comp160599_c0_seq1.mrna1;Target=comp160599_c0_seq1 1594 1740 .
ChrX	stalkie_big_nohaplotig	CDS	24163560	24163658	.	+	0	Parent=comp160599_c0_seq1.mrna1;Target=comp160599_c0_seq1 1495 1593 .
ChrX	gffcl	locus	24199949	24207170	.	+	.	ID=RLOC_00001428;geneIDs=comp155596_c0_seq1.path1;transcripts=comp155596_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24199949	24207170	.	+	.	ID=comp155596_c0_seq1.mrna1;geneID=comp155596_c0_seq1.path1;Name=comp155596_c0_seq1;Dir=sensecoverage=100.0;identity=98.5;matches=975;mismatches=12;indels=3;unknowns=0;Target=comp155596_c0_seq1 300 605 +;locus=RLOC_00001428
ChrX	stalkie_big_nohaplotig	exon	24199949	24200117	98	+	.	Parent=comp155596_c0_seq1.mrna1;Target=comp155596_c0_seq1 1 169 +
ChrX	stalkie_big_nohaplotig	exon	24200195	24200306	96	+	.	Parent=comp155596_c0_seq1.mrna1;Target=comp155596_c0_seq1 170 281 +
ChrX	stalkie_big_nohaplotig	exon	24206395	24206851	100	+	.	Parent=comp155596_c0_seq1.mrna1;Target=comp155596_c0_seq1 282 738 +
ChrX	stalkie_big_nohaplotig	exon	24206919	24207170	96	+	.	Parent=comp155596_c0_seq1.mrna1;Target=comp155596_c0_seq1 739 987 +
ChrX	stalkie_big_nohaplotig	CDS	24206413	24206718	.	+	0	Parent=comp155596_c0_seq1.mrna1
ChrX	gffcl	locus	24263018	24267130	.	+	.	ID=RLOC_00001429;geneIDs=FBgn0039645.1.path1;transcripts=FBgn0039645.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24263018	24267130	.	+	.	ID=FBgn0039645.1.mrna1;geneID=FBgn0039645.1.path1;Name=FBgn0039645.1;Dir=sensecoverage=100.0;identity=99.2;matches=2818;mismatches=22;indels=1;unknowns=0;Target=FBgn0039645.1 3 110 +;locus=RLOC_00001429
ChrX	stalkie_big_nohaplotig	exon	24263018	24264161	99	+	.	Parent=FBgn0039645.1.mrna1;Target=FBgn0039645.1 1 1145 +
ChrX	stalkie_big_nohaplotig	exon	24264215	24264533	99	+	.	Parent=FBgn0039645.1.mrna1;Target=FBgn0039645.1 1146 1464 +
ChrX	stalkie_big_nohaplotig	exon	24264594	24264744	99	+	.	Parent=FBgn0039645.1.mrna1;Target=FBgn0039645.1 1465 1615 +
ChrX	stalkie_big_nohaplotig	exon	24265836	24266784	99	+	.	Parent=FBgn0039645.1.mrna1;Target=FBgn0039645.1 1616 2564 +
ChrX	stalkie_big_nohaplotig	exon	24266854	24267130	98	+	.	Parent=FBgn0039645.1.mrna1;Target=FBgn0039645.1 2565 2841 +
ChrX	stalkie_big_nohaplotig	CDS	24263020	24263126	.	+	0	Parent=FBgn0039645.1.mrna1
ChrX	gffcl	locus	24299014	24300459	.	+	.	ID=RLOC_00001431;geneIDs=FBgn0051467.1.path1;transcripts=FBgn0051467.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24299014	24300459	.	+	.	ID=FBgn0051467.1.mrna1;geneID=FBgn0051467.1.path1;Name=FBgn0051467.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1437;mismatches=9;indels=0;unknowns=0;Target=FBgn0051467.1 1446 1 .;locus=RLOC_00001431
ChrX	stalkie_big_nohaplotig	exon	24299014	24300459	99	+	.	Parent=FBgn0051467.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	24299014	24300459	.	+	0	Parent=FBgn0051467.1.mrna1
ChrX	gffcl	locus	24322991	24323606	.	-	.	ID=RLOC_00001432;geneIDs=comp149876_c0_seq1.path1;transcripts=comp149876_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24322991	24323606	.	-	.	ID=comp149876_c0_seq1.mrna1;geneID=comp149876_c0_seq1.path1;Name=comp149876_c0_seq1;Dir=sensecoverage=99.8;identity=99.3;matches=451;mismatches=3;indels=0;unknowns=0;locus=RLOC_00001432
ChrX	stalkie_big_nohaplotig	exon	24322991	24323293	99	-	.	Parent=comp149876_c0_seq1.mrna1;Target=comp149876_c0_seq1 153 455 +
ChrX	stalkie_big_nohaplotig	exon	24323387	24323508	99	-	.	Parent=comp149876_c0_seq1.mrna1;Target=comp149876_c0_seq1 31 152 +
ChrX	stalkie_big_nohaplotig	exon	24323578	24323606	96	-	.	Parent=comp149876_c0_seq1.mrna1;Target=comp149876_c0_seq1 2 30 +
ChrX	stalkie_big_nohaplotig	CDS	24323227	24323293	.	-	1	Parent=comp149876_c0_seq1.mrna1;Target=comp149876_c0_seq1 153 219 +
ChrX	stalkie_big_nohaplotig	CDS	24323387	24323508	.	-	0	Parent=comp149876_c0_seq1.mrna1;Target=comp149876_c0_seq1 31 152 +
ChrX	gffcl	locus	24327505	24328769	.	+	.	ID=RLOC_00001433;geneIDs=comp156492_c0_seq1.path1;transcripts=comp156492_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24327505	24328769	.	+	.	ID=comp156492_c0_seq1.mrna1;geneID=comp156492_c0_seq1.path1;Name=comp156492_c0_seq1;Dir=antisensecoverage=96.9;identity=99.3;matches=1022;mismatches=7;indels=0;unknowns=0;Target=comp156492_c0_seq1 690 977 .;locus=RLOC_00001433
ChrX	stalkie_big_nohaplotig	exon	24327505	24327888	99	+	.	Parent=comp156492_c0_seq1.mrna1;Target=comp156492_c0_seq1 663 1046 -
ChrX	stalkie_big_nohaplotig	exon	24327953	24328084	99	+	.	Parent=comp156492_c0_seq1.mrna1;Target=comp156492_c0_seq1 531 662 -
ChrX	stalkie_big_nohaplotig	exon	24328150	24328320	99	+	.	Parent=comp156492_c0_seq1.mrna1;Target=comp156492_c0_seq1 360 530 -
ChrX	stalkie_big_nohaplotig	exon	24328376	24328481	100	+	.	Parent=comp156492_c0_seq1.mrna1;Target=comp156492_c0_seq1 254 359 -
ChrX	stalkie_big_nohaplotig	exon	24328534	24328769	98	+	.	Parent=comp156492_c0_seq1.mrna1;Target=comp156492_c0_seq1 18 253 -
ChrX	stalkie_big_nohaplotig	CDS	24327574	24327861	.	+	0	Parent=comp156492_c0_seq1.mrna1
ChrX	gffcl	locus	24354021	24354949	.	+	.	ID=RLOC_00001434;geneIDs=comp154819_c0_seq1.path1;transcripts=comp154819_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24354021	24354949	.	+	.	ID=comp154819_c0_seq1.mrna1;geneID=comp154819_c0_seq1.path1;Name=comp154819_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.5;matches=924;mismatches=5;indels=0;unknowns=0;Target=comp154819_c0_seq1 931 3 .;CDS_Target=comp154819_c0_seq1 534 370 .;locus=RLOC_00001434
ChrX	stalkie_big_nohaplotig	exon	24354021	24354949	99	+	.	Parent=comp154819_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	24354388	24354552	.	+	0	Parent=comp154819_c0_seq1.mrna1
ChrX	gffcl	locus	24358613	24359400	.	+	.	ID=RLOC_00001435;geneIDs=comp142908_c0_seq1.path1;transcripts=comp142908_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24358613	24359400	.	+	.	ID=comp142908_c0_seq1.mrna1;geneID=comp142908_c0_seq1.path1;Name=comp142908_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.5;matches=784;mismatches=4;indels=0;unknowns=0;Target=comp142908_c0_seq1 793 6 .;CDS_Target=comp142908_c0_seq1 274 131 .;locus=RLOC_00001435
ChrX	stalkie_big_nohaplotig	exon	24358613	24359400	99	+	.	Parent=comp142908_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	24358738	24358881	.	+	0	Parent=comp142908_c0_seq1.mrna1
ChrX	gffcl	locus	24428711	24432822	.	-	.	ID=RLOC_00001436;geneIDs=FBgn0031853.10.path1;transcripts=FBgn0031853.10.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24428711	24432822	.	-	.	ID=FBgn0031853.10.mrna1;geneID=FBgn0031853.10.path1;Name=FBgn0031853.10;Dir=sensecoverage=98.8;identity=99.4;matches=2333;mismatches=11;indels=2;unknowns=0;locus=RLOC_00001436
ChrX	stalkie_big_nohaplotig	exon	24428711	24429669	99	-	.	Parent=FBgn0031853.10.mrna1;Target=FBgn0031853.10 1388 2344 +
ChrX	stalkie_big_nohaplotig	exon	24429755	24431125	99	-	.	Parent=FBgn0031853.10.mrna1;Target=FBgn0031853.10 17 1387 +
ChrX	stalkie_big_nohaplotig	exon	24432807	24432822	93	-	.	Parent=FBgn0031853.10.mrna1;Target=FBgn0031853.10 1 16 +
ChrX	stalkie_big_nohaplotig	CDS	24428712	24429669	.	-	2	Parent=FBgn0031853.10.mrna1;Target=FBgn0031853.10 1388 2343 +
ChrX	stalkie_big_nohaplotig	CDS	24429755	24431125	.	-	2	Parent=FBgn0031853.10.mrna1;Target=FBgn0031853.10 17 1387 +
ChrX	stalkie_big_nohaplotig	CDS	24432807	24432822	.	-	0	Parent=FBgn0031853.10.mrna1;Target=FBgn0031853.10 1 16 +
ChrX	gffcl	locus	24451720	24452251	.	+	.	ID=RLOC_00001438;geneIDs=comp148815_c0_seq1.path1;transcripts=comp148815_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24451720	24452251	.	+	.	ID=comp148815_c0_seq1.mrna1;geneID=comp148815_c0_seq1.path1;Name=comp148815_c0_seq1;Dir=sensecoverage=75.5;identity=99.6;matches=467;mismatches=1;indels=1;unknowns=0;locus=RLOC_00001438
ChrX	stalkie_big_nohaplotig	exon	24451720	24451827	99	+	.	Parent=comp148815_c0_seq1.mrna1;Target=comp148815_c0_seq1 78 185 +
ChrX	stalkie_big_nohaplotig	exon	24451892	24452251	99	+	.	Parent=comp148815_c0_seq1.mrna1;Target=comp148815_c0_seq1 186 546 +
ChrX	stalkie_big_nohaplotig	CDS	24451789	24451827	.	+	0	Parent=comp148815_c0_seq1.mrna1;Target=comp148815_c0_seq1 147 185 +
ChrX	stalkie_big_nohaplotig	CDS	24451892	24452143	.	+	0	Parent=comp148815_c0_seq1.mrna1;Target=comp148815_c0_seq1 186 437 +
ChrX	gffcl	locus	24461181	24461783	.	+	.	ID=RLOC_00001439;geneIDs=comp147907_c0_seq1.path1;transcripts=comp147907_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24461181	24461783	.	+	.	ID=comp147907_c0_seq1.mrna1;geneID=comp147907_c0_seq1.path1;Name=comp147907_c0_seq1;Dir=sensecoverage=99.8;identity=100.0;matches=537;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001439
ChrX	stalkie_big_nohaplotig	exon	24461181	24461437	100	+	.	Parent=comp147907_c0_seq1.mrna1;Target=comp147907_c0_seq1 2 258 +
ChrX	stalkie_big_nohaplotig	exon	24461504	24461783	100	+	.	Parent=comp147907_c0_seq1.mrna1;Target=comp147907_c0_seq1 259 538 +
ChrX	stalkie_big_nohaplotig	CDS	24461312	24461437	.	+	0	Parent=comp147907_c0_seq1.mrna1;Target=comp147907_c0_seq1 133 258 +
ChrX	stalkie_big_nohaplotig	CDS	24461504	24461590	.	+	0	Parent=comp147907_c0_seq1.mrna1;Target=comp147907_c0_seq1 259 345 +
ChrX	gffcl	locus	24496918	24499914	.	-	.	ID=RLOC_00001441;geneIDs=FBgn0031853.2.path1;transcripts=FBgn0031853.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24496918	24499914	.	-	.	ID=FBgn0031853.2.mrna1;geneID=FBgn0031853.2.path1;Name=FBgn0031853.2;Dir=sensecoverage=99.3;identity=94.9;matches=1998;mismatches=47;indels=60;unknowns=0;locus=RLOC_00001441
ChrX	stalkie_big_nohaplotig	exon	24496918	24497640	86	-	.	Parent=FBgn0031853.2.mrna1;Target=FBgn0031853.2 1331 2097 +
ChrX	stalkie_big_nohaplotig	exon	24497725	24498998	99	-	.	Parent=FBgn0031853.2.mrna1;Target=FBgn0031853.2 57 1330 +
ChrX	stalkie_big_nohaplotig	exon	24499859	24499914	100	-	.	Parent=FBgn0031853.2.mrna1;Target=FBgn0031853.2 1 56 +
ChrX	stalkie_big_nohaplotig	CDS	24496918	24497640	.	-	2	Parent=FBgn0031853.2.mrna1;Target=FBgn0031853.2 1331 2097 +
ChrX	stalkie_big_nohaplotig	CDS	24497725	24498998	.	-	1	Parent=FBgn0031853.2.mrna1;Target=FBgn0031853.2 57 1330 +
ChrX	stalkie_big_nohaplotig	CDS	24499859	24499914	.	-	0	Parent=FBgn0031853.2.mrna1;Target=FBgn0031853.2 1 56 +
ChrX	gffcl	locus	24500068	24554814	.	+	.	ID=RLOC_00001442;geneIDs=comp146524_c0_seq1.path1,comp155940_c0_seq1.path1,comp157305_c0_seq1.path1;transcripts=comp157305_c0_seq1.mrna1,comp155940_c0_seq1.mrna1,comp146524_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24500068	24554814	.	+	.	ID=comp157305_c0_seq1.mrna1;geneID=comp157305_c0_seq1.path1;Name=comp157305_c0_seq1;Dir=indeterminatecoverage=84.6;identity=99.2;matches=473;mismatches=4;indels=0;unknowns=0;Target=comp157305_c0_seq1 550 491 .;locus=RLOC_00001442
ChrX	stalkie_big_nohaplotig	exon	24500068	24500076	100	+	.	Parent=comp157305_c0_seq1.mrna1;Target=comp157305_c0_seq1 101 93 .
ChrX	stalkie_big_nohaplotig	exon	24500994	24501002	100	+	.	Parent=comp157305_c0_seq1.mrna1;Target=comp157305_c0_seq1 110 102 .
ChrX	stalkie_big_nohaplotig	exon	24504896	24504902	100	+	.	Parent=comp157305_c0_seq1.mrna1;Target=comp157305_c0_seq1 117 111 .
ChrX	stalkie_big_nohaplotig	exon	24510076	24510077	100	+	.	Parent=comp157305_c0_seq1.mrna1;Target=comp157305_c0_seq1 119 118 .
ChrX	stalkie_big_nohaplotig	exon	24516359	24516362	100	+	.	Parent=comp157305_c0_seq1.mrna1;Target=comp157305_c0_seq1 123 120 .
ChrX	stalkie_big_nohaplotig	exon	24517729	24517730	100	+	.	Parent=comp157305_c0_seq1.mrna1;Target=comp157305_c0_seq1 125 124 .
ChrX	stalkie_big_nohaplotig	exon	24525393	24525400	100	+	.	Parent=comp157305_c0_seq1.mrna1;Target=comp157305_c0_seq1 133 126 .
ChrX	stalkie_big_nohaplotig	exon	24526138	24526140	100	+	.	Parent=comp157305_c0_seq1.mrna1;Target=comp157305_c0_seq1 136 134 .
ChrX	stalkie_big_nohaplotig	exon	24526147	24526155	100	+	.	Parent=comp157305_c0_seq1.mrna1;Target=comp157305_c0_seq1 177 169 .
ChrX	stalkie_big_nohaplotig	exon	24526296	24526302	100	+	.	Parent=comp157305_c0_seq1.mrna1;Target=comp157305_c0_seq1 184 178 .
ChrX	stalkie_big_nohaplotig	exon	24527638	24527644	100	+	.	Parent=comp157305_c0_seq1.mrna1;Target=comp157305_c0_seq1 191 185 .
ChrX	stalkie_big_nohaplotig	exon	24530717	24530723	100	+	.	Parent=comp157305_c0_seq1.mrna1;Target=comp157305_c0_seq1 198 192 .
ChrX	stalkie_big_nohaplotig	exon	24540478	24540482	100	+	.	Parent=comp157305_c0_seq1.mrna1;Target=comp157305_c0_seq1 203 199 .
ChrX	stalkie_big_nohaplotig	exon	24541395	24541405	90	+	.	Parent=comp157305_c0_seq1.mrna1;Target=comp157305_c0_seq1 214 204 .
ChrX	stalkie_big_nohaplotig	exon	24541560	24541564	100	+	.	Parent=comp157305_c0_seq1.mrna1;Target=comp157305_c0_seq1 219 215 .
ChrX	stalkie_big_nohaplotig	exon	24547248	24547257	100	+	.	Parent=comp157305_c0_seq1.mrna1;Target=comp157305_c0_seq1 229 220 .
ChrX	stalkie_big_nohaplotig	exon	24547733	24547736	100	+	.	Parent=comp157305_c0_seq1.mrna1;Target=comp157305_c0_seq1 233 230 .
ChrX	stalkie_big_nohaplotig	exon	24554447	24554814	99	+	.	Parent=comp157305_c0_seq1.mrna1;Target=comp157305_c0_seq1 601 234 .
ChrX	stalkie_big_nohaplotig	CDS	24554704	24554763	.	+	0	Parent=comp157305_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24541023	24542147	.	+	.	ID=comp155940_c0_seq1.mrna1;geneID=comp155940_c0_seq1.path1;Name=comp155940_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=1109;mismatches=8;indels=9;unknowns=0;Target=comp155940_c0_seq1 1118 1 .;CDS_Target=comp155940_c0_seq1 1063 941 .;locus=RLOC_00001442
ChrX	stalkie_big_nohaplotig	exon	24541023	24542147	98	+	.	Parent=comp155940_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	24541970	24542092	.	+	0	Parent=comp155940_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24547510	24547925	.	+	.	ID=comp146524_c0_seq1.mrna1;geneID=comp146524_c0_seq1.path1;Name=comp146524_c0_seq1;Dir=indeterminatecoverage=93.8;identity=98.1;matches=408;mismatches=4;indels=4;unknowns=0;Target=comp146524_c0_seq1 438 27 .;CDS_Target=comp146524_c0_seq1 156 82 .;locus=RLOC_00001442
ChrX	stalkie_big_nohaplotig	exon	24547510	24547925	98	+	.	Parent=comp146524_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	24547565	24547639	.	+	0	Parent=comp146524_c0_seq1.mrna1
ChrX	gffcl	locus	24548190	24548961	.	-	.	ID=RLOC_00001444;geneIDs=comp153252_c0_seq1.path1;transcripts=comp153252_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24548190	24548961	.	-	.	ID=comp153252_c0_seq1.mrna1;geneID=comp153252_c0_seq1.path1;Name=comp153252_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=766;mismatches=6;indels=0;unknowns=0;Target=comp153252_c0_seq1 772 1 .;CDS_Target=comp153252_c0_seq1 720 595 .;locus=RLOC_00001444
ChrX	stalkie_big_nohaplotig	exon	24548190	24548961	99	-	.	Parent=comp153252_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	24548242	24548367	.	-	0	Parent=comp153252_c0_seq1.mrna1
ChrX	gffcl	locus	24549106	24549467	.	-	.	ID=RLOC_00001445;geneIDs=comp149834_c0_seq1.path1;transcripts=comp149834_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24549106	24549467	.	-	.	ID=comp149834_c0_seq1.mrna1;geneID=comp149834_c0_seq1.path1;Name=comp149834_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=358;mismatches=4;indels=0;unknowns=0;Target=comp149834_c0_seq1 362 1 .;CDS_Target=comp149834_c0_seq1 98 3 .;locus=RLOC_00001445
ChrX	stalkie_big_nohaplotig	exon	24549106	24549467	98	-	.	Parent=comp149834_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	24549370	24549465	.	-	0	Parent=comp149834_c0_seq1.mrna1
ChrX	gffcl	locus	24550412	24607394	.	+	.	ID=RLOC_00001446;geneIDs=comp746775_c0_seq1.path1,comp746775_c0_seq1.path2;transcripts=comp746775_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24550412	24607394	.	+	.	ID=comp746775_c0_seq1.mrna1;geneID=comp746775_c0_seq1.path1;Name=comp746775_c0_seq1;Dir=indeterminatecoverage=82.4;identity=99.7;matches=377;mismatches=1;indels=0;unknowns=0;Target=comp746775_c0_seq1 184 146 .;locus=RLOC_00001446
ChrX	stalkie_big_nohaplotig	exon	24550412	24550775	99	+	.	Parent=comp746775_c0_seq1.mrna1;Target=comp746775_c0_seq1 365 2 .
ChrX	stalkie_big_nohaplotig	exon	24555135	24555139	100	+	.	Parent=comp746775_c0_seq1.mrna1;Target=comp746775_c0_seq1 370 366 .
ChrX	stalkie_big_nohaplotig	exon	24594069	24594071	100	+	.	Parent=comp746775_c0_seq1.mrna1;Target=comp746775_c0_seq1 373 371 .
ChrX	stalkie_big_nohaplotig	exon	24602068	24602071	100	+	.	Parent=comp746775_c0_seq1.mrna1;Target=comp746775_c0_seq1 377 374 .
ChrX	stalkie_big_nohaplotig	exon	24607393	24607394	100	+	.	Parent=comp746775_c0_seq1.mrna1;Target=comp746775_c0_seq1 379 378 .
ChrX	stalkie_big_nohaplotig	CDS	24550556	24550594	.	+	0	Parent=comp746775_c0_seq1.mrna1
ChrX	gffcl	locus	24550867	24551168	.	+	.	ID=RLOC_00001447;geneIDs=comp141973_c0_seq1.path1;transcripts=comp141973_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24550867	24551168	.	+	.	ID=comp141973_c0_seq1.mrna1;geneID=comp141973_c0_seq1.path1;Name=comp141973_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=302;mismatches=0;indels=0;unknowns=0;Target=comp141973_c0_seq1 302 1 .;CDS_Target=comp141973_c0_seq1 64 23 .;locus=RLOC_00001447
ChrX	stalkie_big_nohaplotig	exon	24550867	24551168	100	+	.	Parent=comp141973_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	24550889	24550930	.	+	0	Parent=comp141973_c0_seq1.mrna1
ChrX	gffcl	locus	24551616	24552024	.	-	.	ID=RLOC_00001448;geneIDs=comp143058_c0_seq1.path1;transcripts=comp143058_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24551616	24552024	.	-	.	ID=comp143058_c0_seq1.mrna1;geneID=comp143058_c0_seq1.path1;Name=comp143058_c0_seq1;Dir=indeterminatecoverage=80.9;identity=99.8;matches=409;mismatches=0;indels=1;unknowns=0;Target=comp143058_c0_seq1 410 1 .;CDS_Target=comp143058_c0_seq1 77 3 .;locus=RLOC_00001448
ChrX	stalkie_big_nohaplotig	exon	24551616	24552024	99	-	.	Parent=comp143058_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	24551948	24552022	.	-	0	Parent=comp143058_c0_seq1.mrna1
ChrX	gffcl	locus	24552391	24552600	.	-	.	ID=RLOC_00001449;geneIDs=comp150458_c0_seq1.path1;transcripts=comp150458_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24552391	24552600	.	-	.	ID=comp150458_c0_seq1.mrna1;geneID=comp150458_c0_seq1.path1;Name=comp150458_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=208;mismatches=2;indels=0;unknowns=0;Target=comp150458_c0_seq1 210 1 .;CDS_Target=comp150458_c0_seq1 190 92 .;locus=RLOC_00001449
ChrX	stalkie_big_nohaplotig	exon	24552391	24552600	99	-	.	Parent=comp150458_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	24552411	24552509	.	-	0	Parent=comp150458_c0_seq1.mrna1
ChrX	gffcl	locus	24555669	24556746	.	-	.	ID=RLOC_00001450;geneIDs=comp148908_c0_seq1.path1;transcripts=comp148908_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24555669	24556746	.	-	.	ID=comp148908_c0_seq1.mrna1;geneID=comp148908_c0_seq1.path1;Name=comp148908_c0_seq1;Dir=indeterminatecoverage=98.4;identity=98.4;matches=1061;mismatches=17;indels=0;unknowns=0;Target=comp148908_c0_seq1 1078 1 .;CDS_Target=comp148908_c0_seq1 139 2 .;locus=RLOC_00001450
ChrX	stalkie_big_nohaplotig	exon	24555669	24556746	98	-	.	Parent=comp148908_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	24556608	24556745	.	-	0	Parent=comp148908_c0_seq1.mrna1
ChrX	gffcl	locus	24563550	24588149	.	+	.	ID=RLOC_00001451;geneIDs=FBgn0027378.2.path1;transcripts=FBgn0027378.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24563550	24588149	.	+	.	ID=FBgn0027378.2.mrna1;geneID=FBgn0027378.2.path1;Name=FBgn0027378.2;Dir=sensecoverage=100.0;identity=98.4;matches=1098;mismatches=18;indels=0;unknowns=0;locus=RLOC_00001451
ChrX	stalkie_big_nohaplotig	exon	24563550	24563631	96	+	.	Parent=FBgn0027378.2.mrna1;Target=FBgn0027378.2 1 82 +
ChrX	stalkie_big_nohaplotig	exon	24563701	24563818	97	+	.	Parent=FBgn0027378.2.mrna1;Target=FBgn0027378.2 83 200 +
ChrX	stalkie_big_nohaplotig	exon	24563871	24563892	100	+	.	Parent=FBgn0027378.2.mrna1;Target=FBgn0027378.2 201 222 +
ChrX	stalkie_big_nohaplotig	exon	24587174	24587264	98	+	.	Parent=FBgn0027378.2.mrna1;Target=FBgn0027378.2 223 313 +
ChrX	stalkie_big_nohaplotig	exon	24587347	24588149	98	+	.	Parent=FBgn0027378.2.mrna1;Target=FBgn0027378.2 314 1116 +
ChrX	stalkie_big_nohaplotig	CDS	24563550	24563631	.	+	0	Parent=FBgn0027378.2.mrna1;Target=FBgn0027378.2 1 82 +
ChrX	stalkie_big_nohaplotig	CDS	24563701	24563818	.	+	2	Parent=FBgn0027378.2.mrna1;Target=FBgn0027378.2 83 200 +
ChrX	stalkie_big_nohaplotig	CDS	24563871	24563892	.	+	1	Parent=FBgn0027378.2.mrna1;Target=FBgn0027378.2 201 222 +
ChrX	stalkie_big_nohaplotig	CDS	24587174	24587264	.	+	0	Parent=FBgn0027378.2.mrna1;Target=FBgn0027378.2 223 313 +
ChrX	stalkie_big_nohaplotig	CDS	24587347	24588149	.	+	2	Parent=FBgn0027378.2.mrna1;Target=FBgn0027378.2 314 1116 +
ChrX	gffcl	locus	24590864	24591933	.	+	.	ID=RLOC_00001452;geneIDs=comp145951_c0_seq1.path1;transcripts=comp145951_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24590864	24591933	.	+	.	ID=comp145951_c0_seq1.mrna1;geneID=comp145951_c0_seq1.path1;Name=comp145951_c0_seq1;Dir=antisensecoverage=100.0;identity=98.7;matches=818;mismatches=11;indels=0;unknowns=0;locus=RLOC_00001452
ChrX	stalkie_big_nohaplotig	exon	24590864	24590966	100	+	.	Parent=comp145951_c0_seq1.mrna1;Target=comp145951_c0_seq1 727 829 -
ChrX	stalkie_big_nohaplotig	exon	24591208	24591933	98	+	.	Parent=comp145951_c0_seq1.mrna1;Target=comp145951_c0_seq1 1 726 -
ChrX	stalkie_big_nohaplotig	CDS	24590946	24590966	.	+	0	Parent=comp145951_c0_seq1.mrna1;Target=comp145951_c0_seq1 727 747 .
ChrX	stalkie_big_nohaplotig	CDS	24591208	24591921	.	+	0	Parent=comp145951_c0_seq1.mrna1;Target=comp145951_c0_seq1 13 726 .
ChrX	gffcl	locus	24593285	24594116	.	-	.	ID=RLOC_00001453;geneIDs=comp152484_c0_seq1.path1;transcripts=comp152484_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24593285	24594116	.	-	.	ID=comp152484_c0_seq1.mrna1;geneID=comp152484_c0_seq1.path1;Name=comp152484_c0_seq1;Dir=antisensecoverage=99.7;identity=98.1;matches=675;mismatches=12;indels=1;unknowns=0;locus=RLOC_00001453
ChrX	stalkie_big_nohaplotig	exon	24593285	24593743	98	-	.	Parent=comp152484_c0_seq1.mrna1;Target=comp152484_c0_seq1 2 460 -
ChrX	stalkie_big_nohaplotig	exon	24593889	24594116	98	-	.	Parent=comp152484_c0_seq1.mrna1;Target=comp152484_c0_seq1 461 689 -
ChrX	stalkie_big_nohaplotig	CDS	24593377	24593743	.	-	1	Parent=comp152484_c0_seq1.mrna1;Target=comp152484_c0_seq1 94 460 .
ChrX	stalkie_big_nohaplotig	CDS	24593889	24593905	.	-	0	Parent=comp152484_c0_seq1.mrna1;Target=comp152484_c0_seq1 461 477 .
ChrX	gffcl	locus	24614711	24616582	.	+	.	ID=RLOC_00001454;geneIDs=ORF406.path1;transcripts=ORF406.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24614711	24616582	.	+	.	ID=ORF406.mrna1;geneID=ORF406.path1;Name=ORF406;Dir=indeterminatecoverage=100.0;identity=97.7;matches=1841;mismatches=31;indels=12;unknowns=0;Target=ORF406 1884 1 .;locus=RLOC_00001454
ChrX	stalkie_big_nohaplotig	exon	24614711	24616582	97	+	.	Parent=ORF406.mrna1
ChrX	stalkie_big_nohaplotig	CDS	24614711	24616582	.	+	0	Parent=ORF406.mrna1
ChrX	gffcl	locus	24622411	24623862	.	-	.	ID=RLOC_00001455;geneIDs=FBgn0051467.2.path1;transcripts=FBgn0051467.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24622411	24623862	.	-	.	ID=FBgn0051467.2.mrna1;geneID=FBgn0051467.2.path1;Name=FBgn0051467.2;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1442;mismatches=10;indels=0;unknowns=0;Target=FBgn0051467.2 1452 1 .;locus=RLOC_00001455
ChrX	stalkie_big_nohaplotig	exon	24622411	24623862	99	-	.	Parent=FBgn0051467.2.mrna1
ChrX	stalkie_big_nohaplotig	CDS	24622411	24623862	.	-	0	Parent=FBgn0051467.2.mrna1
ChrX	gffcl	locus	24695976	24696536	.	+	.	ID=RLOC_00001456;geneIDs=comp152968_c0_seq1.path1;transcripts=comp152968_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24695976	24696536	.	+	.	ID=comp152968_c0_seq1.mrna1;geneID=comp152968_c0_seq1.path1;Name=comp152968_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.6;matches=559;mismatches=2;indels=0;unknowns=0;Target=comp152968_c0_seq1 567 7 .;CDS_Target=comp152968_c0_seq1 440 108 .;locus=RLOC_00001456
ChrX	stalkie_big_nohaplotig	exon	24695976	24696536	99	+	.	Parent=comp152968_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	24696077	24696409	.	+	0	Parent=comp152968_c0_seq1.mrna1
ChrX	gffcl	locus	24701660	24702670	.	-	.	ID=RLOC_00001457;geneIDs=ORF1934.path1;transcripts=ORF1934.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24701660	24702670	.	-	.	ID=ORF1934.mrna1;geneID=ORF1934.path1;Name=ORF1934;Dir=sensecoverage=100.0;identity=97.2;matches=930;mismatches=21;indels=6;unknowns=0;locus=RLOC_00001457
ChrX	stalkie_big_nohaplotig	exon	24701660	24701979	95	-	.	Parent=ORF1934.mrna1;Target=ORF1934 632 957 +
ChrX	stalkie_big_nohaplotig	exon	24702040	24702670	98	-	.	Parent=ORF1934.mrna1;Target=ORF1934 1 631 +
ChrX	stalkie_big_nohaplotig	CDS	24701660	24701979	.	-	2	Parent=ORF1934.mrna1;Target=ORF1934 632 957 +
ChrX	stalkie_big_nohaplotig	CDS	24702040	24702670	.	-	0	Parent=ORF1934.mrna1;Target=ORF1934 1 631 +
ChrX	gffcl	locus	24704326	24707302	.	+	.	ID=RLOC_00001458;geneIDs=ORF157.path1;transcripts=ORF157.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24704326	24707302	.	+	.	ID=ORF157.mrna1;geneID=ORF157.path1;Name=ORF157;Dir=sensecoverage=100.0;identity=99.5;matches=2710;mismatches=14;indels=0;unknowns=0;locus=RLOC_00001458
ChrX	stalkie_big_nohaplotig	exon	24704326	24706564	99	+	.	Parent=ORF157.mrna1;Target=ORF157 1 2239 +
ChrX	stalkie_big_nohaplotig	exon	24706759	24706922	98	+	.	Parent=ORF157.mrna1;Target=ORF157 2240 2403 +
ChrX	stalkie_big_nohaplotig	exon	24706982	24707302	99	+	.	Parent=ORF157.mrna1;Target=ORF157 2404 2724 +
ChrX	stalkie_big_nohaplotig	CDS	24704326	24706564	.	+	0	Parent=ORF157.mrna1;Target=ORF157 1 2239 +
ChrX	stalkie_big_nohaplotig	CDS	24706759	24706922	.	+	2	Parent=ORF157.mrna1;Target=ORF157 2240 2403 +
ChrX	stalkie_big_nohaplotig	CDS	24706982	24707302	.	+	0	Parent=ORF157.mrna1;Target=ORF157 2404 2724 +
ChrX	gffcl	locus	24727611	24730905	.	+	.	ID=RLOC_00001459;geneIDs=FBgn0039680.1.path1;transcripts=FBgn0039680.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24727611	24730905	.	+	.	ID=FBgn0039680.1.mrna1;geneID=FBgn0039680.1.path1;Name=FBgn0039680.1;Dir=sensecoverage=65.3;identity=90.7;matches=2138;mismatches=151;indels=69;unknowns=100;locus=RLOC_00001459
ChrX	stalkie_big_nohaplotig	exon	24727611	24727837	100	+	.	Parent=FBgn0039680.1.mrna1;Target=FBgn0039680.1 1308 1534 +
ChrX	stalkie_big_nohaplotig	exon	24728068	24728170	100	+	.	Parent=FBgn0039680.1.mrna1;Target=FBgn0039680.1 1535 1637 +
ChrX	stalkie_big_nohaplotig	exon	24728234	24728330	100	+	.	Parent=FBgn0039680.1.mrna1;Target=FBgn0039680.1 1638 1734 +
ChrX	stalkie_big_nohaplotig	exon	24728554	24728849	91	+	.	Parent=FBgn0039680.1.mrna1;Target=FBgn0039680.1 1735 2030 +
ChrX	stalkie_big_nohaplotig	exon	24728921	24729752	83	+	.	Parent=FBgn0039680.1.mrna1;Target=FBgn0039680.1 2031 2928 +
ChrX	stalkie_big_nohaplotig	exon	24730072	24730905	94	+	.	Parent=FBgn0039680.1.mrna1;Target=FBgn0039680.1 2929 3765 +
ChrX	stalkie_big_nohaplotig	CDS	24727612	24727837	.	+	0	Parent=FBgn0039680.1.mrna1;Target=FBgn0039680.1 1309 1534 +
ChrX	stalkie_big_nohaplotig	CDS	24728068	24728170	.	+	2	Parent=FBgn0039680.1.mrna1;Target=FBgn0039680.1 1535 1637 +
ChrX	stalkie_big_nohaplotig	CDS	24728234	24728330	.	+	1	Parent=FBgn0039680.1.mrna1;Target=FBgn0039680.1 1638 1734 +
ChrX	stalkie_big_nohaplotig	CDS	24728554	24728849	.	+	0	Parent=FBgn0039680.1.mrna1;Target=FBgn0039680.1 1735 2030 +
ChrX	stalkie_big_nohaplotig	CDS	24728921	24729752	.	+	1	Parent=FBgn0039680.1.mrna1;Target=FBgn0039680.1 2031 2928 +
ChrX	stalkie_big_nohaplotig	CDS	24730072	24730905	.	+	0	Parent=FBgn0039680.1.mrna1;Target=FBgn0039680.1 2929 3765 +
ChrX	gffcl	locus	24746751	24747890	.	-	.	ID=RLOC_00001460;geneIDs=ORF1326.path1;transcripts=ORF1326.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24746751	24747890	.	-	.	ID=ORF1326.mrna1;geneID=ORF1326.path1;Name=ORF1326;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1136;mismatches=4;indels=0;unknowns=0;Target=ORF1326 1140 1 .;locus=RLOC_00001460
ChrX	stalkie_big_nohaplotig	exon	24746751	24747890	99	-	.	Parent=ORF1326.mrna1
ChrX	stalkie_big_nohaplotig	CDS	24746751	24747890	.	-	0	Parent=ORF1326.mrna1
ChrX	gffcl	locus	24763520	24966602	.	.	.	ID=RLOC_00001461;geneIDs=comp144736_c0_seq1.path1,comp163188_c0_seq1.path1;transcripts=comp163188_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24763879	24966602	.	+	.	ID=comp163188_c0_seq1.mrna1;geneID=comp163188_c0_seq1.path1;Name=comp163188_c0_seq1;Dir=antisensecoverage=86.2;identity=92.3;matches=2629;mismatches=145;indels=74;unknowns=0;Target=comp163188_c0_seq1 2171 2797 .;locus=RLOC_00001461
ChrX	stalkie_big_nohaplotig	exon	24763879	24764578	94	+	.	Parent=comp163188_c0_seq1.mrna1;Target=comp163188_c0_seq1 2100 2799 -
ChrX	stalkie_big_nohaplotig	exon	24765197	24765584	96	+	.	Parent=comp163188_c0_seq1.mrna1;Target=comp163188_c0_seq1 1715 2099 -
ChrX	stalkie_big_nohaplotig	exon	24765636	24765977	85	+	.	Parent=comp163188_c0_seq1.mrna1;Target=comp163188_c0_seq1 1414 1714 -
ChrX	stalkie_big_nohaplotig	exon	24766049	24766118	94	+	.	Parent=comp163188_c0_seq1.mrna1;Target=comp163188_c0_seq1 1344 1413 -
ChrX	stalkie_big_nohaplotig	exon	24965136	24965431	99	+	.	Parent=comp163188_c0_seq1.mrna1;Target=comp163188_c0_seq1 1048 1343 -
ChrX	stalkie_big_nohaplotig	exon	24965506	24965779	100	+	.	Parent=comp163188_c0_seq1.mrna1;Target=comp163188_c0_seq1 774 1047 -
ChrX	stalkie_big_nohaplotig	exon	24965849	24966602	85	+	.	Parent=comp163188_c0_seq1.mrna1;Target=comp163188_c0_seq1 2 773 -
ChrX	stalkie_big_nohaplotig	CDS	24763881	24764507	.	+	0	Parent=comp163188_c0_seq1.mrna1
ChrX	gffcl	locus	24791836	24792804	.	-	.	ID=RLOC_00001462;geneIDs=comp148462_c0_seq1.path1;transcripts=comp148462_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24791836	24792804	.	-	.	ID=comp148462_c0_seq1.mrna1;geneID=comp148462_c0_seq1.path1;Name=comp148462_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=815;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001462
ChrX	stalkie_big_nohaplotig	exon	24791836	24792294	99	-	.	Parent=comp148462_c0_seq1.mrna1;Target=comp148462_c0_seq1 361 819 +
ChrX	stalkie_big_nohaplotig	exon	24792353	24792451	100	-	.	Parent=comp148462_c0_seq1.mrna1;Target=comp148462_c0_seq1 262 360 +
ChrX	stalkie_big_nohaplotig	exon	24792544	24792804	99	-	.	Parent=comp148462_c0_seq1.mrna1;Target=comp148462_c0_seq1 1 261 +
ChrX	stalkie_big_nohaplotig	CDS	24791930	24792294	.	-	2	Parent=comp148462_c0_seq1.mrna1;Target=comp148462_c0_seq1 361 725 +
ChrX	stalkie_big_nohaplotig	CDS	24792353	24792451	.	-	2	Parent=comp148462_c0_seq1.mrna1;Target=comp148462_c0_seq1 262 360 +
ChrX	stalkie_big_nohaplotig	CDS	24792544	24792628	.	-	0	Parent=comp148462_c0_seq1.mrna1;Target=comp148462_c0_seq1 177 261 +
ChrX	gffcl	locus	24817689	24818413	.	+	.	ID=RLOC_00001463;geneIDs=comp150654_c0_seq1.path1;transcripts=comp150654_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24817689	24818413	.	+	.	ID=comp150654_c0_seq1.mrna1;geneID=comp150654_c0_seq1.path1;Name=comp150654_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.4;matches=721;mismatches=4;indels=0;unknowns=0;Target=comp150654_c0_seq1 725 1 .;CDS_Target=comp150654_c0_seq1 473 141 .;locus=RLOC_00001463
ChrX	stalkie_big_nohaplotig	exon	24817689	24818413	99	+	.	Parent=comp150654_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	24817829	24818161	.	+	0	Parent=comp150654_c0_seq1.mrna1
ChrX	gffcl	locus	24849349	24851263	.	-	.	ID=RLOC_00001464;geneIDs=comp150804_c0_seq1.path1;transcripts=comp150804_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24849349	24851263	.	-	.	ID=comp150804_c0_seq1.mrna1;geneID=comp150804_c0_seq1.path1;Name=comp150804_c0_seq1;Dir=antisensecoverage=99.0;identity=99.7;matches=910;mismatches=3;indels=0;unknowns=0;locus=RLOC_00001464
ChrX	stalkie_big_nohaplotig	exon	24849349	24849598	100	-	.	Parent=comp150804_c0_seq1.mrna1;Target=comp150804_c0_seq1 10 259 -
ChrX	stalkie_big_nohaplotig	exon	24849653	24849728	98	-	.	Parent=comp150804_c0_seq1.mrna1;Target=comp150804_c0_seq1 260 335 -
ChrX	stalkie_big_nohaplotig	exon	24849832	24849945	98	-	.	Parent=comp150804_c0_seq1.mrna1;Target=comp150804_c0_seq1 336 449 -
ChrX	stalkie_big_nohaplotig	exon	24850638	24850705	100	-	.	Parent=comp150804_c0_seq1.mrna1;Target=comp150804_c0_seq1 450 517 -
ChrX	stalkie_big_nohaplotig	exon	24850786	24851044	100	-	.	Parent=comp150804_c0_seq1.mrna1;Target=comp150804_c0_seq1 518 776 -
ChrX	stalkie_big_nohaplotig	exon	24851118	24851263	100	-	.	Parent=comp150804_c0_seq1.mrna1;Target=comp150804_c0_seq1 777 922 -
ChrX	stalkie_big_nohaplotig	CDS	24850802	24851044	.	-	0	Parent=comp150804_c0_seq1.mrna1;Target=comp150804_c0_seq1 534 776 .
ChrX	stalkie_big_nohaplotig	CDS	24851118	24851123	.	-	0	Parent=comp150804_c0_seq1.mrna1;Target=comp150804_c0_seq1 777 782 .
ChrX	gffcl	locus	24855347	24856098	.	+	.	ID=RLOC_00001465;geneIDs=comp150403_c0_seq1.path1;transcripts=comp150403_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24855347	24856098	.	+	.	ID=comp150403_c0_seq1.mrna1;geneID=comp150403_c0_seq1.path1;Name=comp150403_c0_seq1;Dir=sensecoverage=100.0;identity=98.5;matches=540;mismatches=8;indels=0;unknowns=0;locus=RLOC_00001465
ChrX	stalkie_big_nohaplotig	exon	24855347	24855548	97	+	.	Parent=comp150403_c0_seq1.mrna1;Target=comp150403_c0_seq1 1 202 +
ChrX	stalkie_big_nohaplotig	exon	24855753	24856098	99	+	.	Parent=comp150403_c0_seq1.mrna1;Target=comp150403_c0_seq1 203 548 +
ChrX	stalkie_big_nohaplotig	CDS	24855483	24855548	.	+	0	Parent=comp150403_c0_seq1.mrna1;Target=comp150403_c0_seq1 137 202 +
ChrX	stalkie_big_nohaplotig	CDS	24855753	24856052	.	+	0	Parent=comp150403_c0_seq1.mrna1;Target=comp150403_c0_seq1 203 502 +
ChrX	gffcl	locus	24870741	24871155	.	+	.	ID=RLOC_00001466;geneIDs=comp154563_c0_seq1.path1;transcripts=comp154563_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24870741	24871155	.	+	.	ID=comp154563_c0_seq1.mrna1;geneID=comp154563_c0_seq1.path1;Name=comp154563_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.8;matches=404;mismatches=8;indels=14;unknowns=0;Target=comp154563_c0_seq1 423 1 .;CDS_Target=comp154563_c0_seq1 118 2 .;locus=RLOC_00001466
ChrX	stalkie_big_nohaplotig	exon	24870741	24871155	94	+	.	Parent=comp154563_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	24870742	24870847	.	+	0	Parent=comp154563_c0_seq1.mrna1
ChrX	gffcl	locus	24883769	24884442	.	-	.	ID=RLOC_00001467;geneIDs=comp153309_c0_seq1.path1;transcripts=comp153309_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24883769	24884442	.	-	.	ID=comp153309_c0_seq1.mrna1;geneID=comp153309_c0_seq1.path1;Name=comp153309_c0_seq1;Dir=indeterminatecoverage=99.4;identity=100.0;matches=674;mismatches=0;indels=0;unknowns=0;Target=comp153309_c0_seq1 675 2 .;CDS_Target=comp153309_c0_seq1 376 287 .;locus=RLOC_00001467
ChrX	stalkie_big_nohaplotig	exon	24883769	24884442	100	-	.	Parent=comp153309_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	24884068	24884157	.	-	0	Parent=comp153309_c0_seq1.mrna1
ChrX	gffcl	locus	24903028	24912266	.	-	.	ID=RLOC_00001468;geneIDs=FBgn0034313.2.path1;transcripts=FBgn0034313.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24903028	24912266	.	-	.	ID=FBgn0034313.2.mrna1;geneID=FBgn0034313.2.path1;Name=FBgn0034313.2;Dir=sensecoverage=52.1;identity=94.7;matches=715;mismatches=8;indels=32;unknowns=77;locus=RLOC_00001468
ChrX	stalkie_big_nohaplotig	exon	24903028	24903033	14	-	.	Parent=FBgn0034313.2.mrna1;Target=FBgn0034313.2 850 883 +
ChrX	stalkie_big_nohaplotig	exon	24904197	24904205	100	-	.	Parent=FBgn0034313.2.mrna1;Target=FBgn0034313.2 820 828 +
ChrX	stalkie_big_nohaplotig	exon	24907136	24907141	16	-	.	Parent=FBgn0034313.2.mrna1;Target=FBgn0034313.2 803 804 +
ChrX	stalkie_big_nohaplotig	exon	24909273	24909278	100	-	.	Parent=FBgn0034313.2.mrna1;Target=FBgn0034313.2 778 783 +
ChrX	stalkie_big_nohaplotig	exon	24910510	24910945	99	-	.	Parent=FBgn0034313.2.mrna1;Target=FBgn0034313.2 342 777 +
ChrX	stalkie_big_nohaplotig	exon	24911926	24912266	98	-	.	Parent=FBgn0034313.2.mrna1;Target=FBgn0034313.2 1 341 +
ChrX	stalkie_big_nohaplotig	CDS	24903029	24903033	.	-	0	Parent=FBgn0034313.2.mrna1;Target=FBgn0034313.2 850 882 +
ChrX	stalkie_big_nohaplotig	CDS	24904197	24904205	.	-	0	Parent=FBgn0034313.2.mrna1;Target=FBgn0034313.2 820 828 +
ChrX	stalkie_big_nohaplotig	CDS	24907136	24907141	.	-	0	Parent=FBgn0034313.2.mrna1;Target=FBgn0034313.2 803 804 +
ChrX	stalkie_big_nohaplotig	CDS	24909273	24909278	.	-	0	Parent=FBgn0034313.2.mrna1;Target=FBgn0034313.2 778 783 +
ChrX	stalkie_big_nohaplotig	CDS	24910510	24910945	.	-	1	Parent=FBgn0034313.2.mrna1;Target=FBgn0034313.2 342 777 +
ChrX	stalkie_big_nohaplotig	CDS	24911926	24912266	.	-	0	Parent=FBgn0034313.2.mrna1;Target=FBgn0034313.2 1 341 +
ChrX	gffcl	locus	24926654	24927481	.	+	.	ID=RLOC_00001469;geneIDs=comp155981_c0_seq1.path1;transcripts=comp155981_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24926654	24927481	.	+	.	ID=comp155981_c0_seq1.mrna1;geneID=comp155981_c0_seq1.path1;Name=comp155981_c0_seq1;Dir=antisensecoverage=99.9;identity=99.3;matches=760;mismatches=5;indels=0;unknowns=0;locus=RLOC_00001469
ChrX	stalkie_big_nohaplotig	exon	24926654	24926782	96	+	.	Parent=comp155981_c0_seq1.mrna1;Target=comp155981_c0_seq1 637 765 -
ChrX	stalkie_big_nohaplotig	exon	24926846	24927481	100	+	.	Parent=comp155981_c0_seq1.mrna1;Target=comp155981_c0_seq1 1 636 -
ChrX	stalkie_big_nohaplotig	CDS	24926656	24926782	.	+	0	Parent=comp155981_c0_seq1.mrna1;Target=comp155981_c0_seq1 637 763 .
ChrX	stalkie_big_nohaplotig	CDS	24926846	24927321	.	+	2	Parent=comp155981_c0_seq1.mrna1;Target=comp155981_c0_seq1 161 636 .
ChrX	gffcl	locus	24958834	24959901	.	-	.	ID=RLOC_00001471;geneIDs=ORF1530.path1;transcripts=ORF1530.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	24958834	24959901	.	-	.	ID=ORF1530.mrna1;geneID=ORF1530.path1;Name=ORF1530;Dir=indeterminatecoverage=100.0;identity=97.4;matches=1043;mismatches=25;indels=3;unknowns=0;Target=ORF1530 1071 1 .;locus=RLOC_00001471
ChrX	stalkie_big_nohaplotig	exon	24958834	24959901	97	-	.	Parent=ORF1530.mrna1
ChrX	stalkie_big_nohaplotig	CDS	24958834	24959901	.	-	0	Parent=ORF1530.mrna1
ChrX	gffcl	locus	24963373	24964440	.	+	.	ID=RLOC_00001472;geneIDs=ORF1530.path2;transcripts=ORF1530.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	24963373	24964440	.	+	.	ID=ORF1530.mrna2;geneID=ORF1530.path2;Name=ORF1530;Dir=indeterminatecoverage=100.0;identity=97.3;matches=1042;mismatches=26;indels=3;unknowns=0;Target=ORF1530 1071 1 .;locus=RLOC_00001472
ChrX	stalkie_big_nohaplotig	exon	24963373	24964440	97	+	.	Parent=ORF1530.mrna2
ChrX	stalkie_big_nohaplotig	CDS	24963373	24964440	.	+	0	Parent=ORF1530.mrna2
ChrX	gffcl	locus	25002744	25005941	.	+	.	ID=RLOC_00001473;geneIDs=comp150937_c0_seq1.path1;transcripts=comp150937_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25002744	25005941	.	+	.	ID=comp150937_c0_seq1.mrna1;geneID=comp150937_c0_seq1.path1;Name=comp150937_c0_seq1;Dir=sensecoverage=100.0;identity=97.1;matches=2028;mismatches=57;indels=3;unknowns=0;Target=comp150937_c0_seq1 3 26 +;locus=RLOC_00001473
ChrX	stalkie_big_nohaplotig	exon	25002744	25002992	98	+	.	Parent=comp150937_c0_seq1.mrna1;Target=comp150937_c0_seq1 1 250 +
ChrX	stalkie_big_nohaplotig	exon	25003677	25004196	97	+	.	Parent=comp150937_c0_seq1.mrna1;Target=comp150937_c0_seq1 251 770 +
ChrX	stalkie_big_nohaplotig	exon	25004257	25004437	97	+	.	Parent=comp150937_c0_seq1.mrna1;Target=comp150937_c0_seq1 771 951 +
ChrX	stalkie_big_nohaplotig	exon	25004696	25005283	98	+	.	Parent=comp150937_c0_seq1.mrna1;Target=comp150937_c0_seq1 952 1539 +
ChrX	stalkie_big_nohaplotig	exon	25005395	25005941	94	+	.	Parent=comp150937_c0_seq1.mrna1;Target=comp150937_c0_seq1 1540 2088 +
ChrX	stalkie_big_nohaplotig	CDS	25002746	25002768	.	+	0	Parent=comp150937_c0_seq1.mrna1
ChrX	gffcl	locus	25016420	26894279	.	-	.	ID=RLOC_00001474;geneIDs=comp156818_c1_seq1.path1;transcripts=comp156818_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25016420	26894279	.	-	.	ID=comp156818_c1_seq1.mrna1;geneID=comp156818_c1_seq1.path1;Name=comp156818_c1_seq1;Dir=indeterminatecoverage=96.4;identity=99.3;matches=884;mismatches=3;indels=3;unknowns=0;Target=comp156818_c1_seq1 80 3 .;locus=RLOC_00001474
ChrX	stalkie_big_nohaplotig	exon	25016420	25016425	100	-	.	Parent=comp156818_c1_seq1.mrna1;Target=comp156818_c1_seq1 887 882 .
ChrX	stalkie_big_nohaplotig	exon	25017726	25017733	100	-	.	Parent=comp156818_c1_seq1.mrna1;Target=comp156818_c1_seq1 881 874 .
ChrX	stalkie_big_nohaplotig	exon	25018062	25018063	100	-	.	Parent=comp156818_c1_seq1.mrna1;Target=comp156818_c1_seq1 873 872 .
ChrX	stalkie_big_nohaplotig	exon	25024978	25024991	100	-	.	Parent=comp156818_c1_seq1.mrna1;Target=comp156818_c1_seq1 871 858 .
ChrX	stalkie_big_nohaplotig	exon	25036849	25036851	100	-	.	Parent=comp156818_c1_seq1.mrna1;Target=comp156818_c1_seq1 857 855 .
ChrX	stalkie_big_nohaplotig	exon	26893423	26894279	99	-	.	Parent=comp156818_c1_seq1.mrna1;Target=comp156818_c1_seq1 854 1 .
ChrX	stalkie_big_nohaplotig	CDS	26894200	26894277	.	-	0	Parent=comp156818_c1_seq1.mrna1
ChrX	gffcl	locus	25019396	25020961	.	+	.	ID=RLOC_00001475;geneIDs=comp156751_c0_seq1.path1;transcripts=comp156751_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25019396	25020961	.	+	.	ID=comp156751_c0_seq1.mrna1;geneID=comp156751_c0_seq1.path1;Name=comp156751_c0_seq1;Dir=antisensecoverage=99.9;identity=99.6;matches=1291;mismatches=4;indels=1;unknowns=0;locus=RLOC_00001475
ChrX	stalkie_big_nohaplotig	exon	25019396	25019625	98	+	.	Parent=comp156751_c0_seq1.mrna1;Target=comp156751_c0_seq1 1067 1296 -
ChrX	stalkie_big_nohaplotig	exon	25019725	25020048	99	+	.	Parent=comp156751_c0_seq1.mrna1;Target=comp156751_c0_seq1 742 1066 -
ChrX	stalkie_big_nohaplotig	exon	25020121	25020481	99	+	.	Parent=comp156751_c0_seq1.mrna1;Target=comp156751_c0_seq1 381 741 -
ChrX	stalkie_big_nohaplotig	exon	25020582	25020961	100	+	.	Parent=comp156751_c0_seq1.mrna1;Target=comp156751_c0_seq1 1 380 -
ChrX	stalkie_big_nohaplotig	CDS	25019485	25019625	.	+	0	Parent=comp156751_c0_seq1.mrna1;Target=comp156751_c0_seq1 1067 1207 .
ChrX	stalkie_big_nohaplotig	CDS	25019725	25019823	.	+	0	Parent=comp156751_c0_seq1.mrna1;Target=comp156751_c0_seq1 968 1066 .
ChrX	gffcl	locus	25025449	25032648	.	-	.	ID=RLOC_00001476;geneIDs=FBgn0023211.3.path1;transcripts=FBgn0023211.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25025449	25032648	.	-	.	ID=FBgn0023211.3.mrna1;geneID=FBgn0023211.3.path1;Name=FBgn0023211.3;Dir=sensecoverage=100.0;identity=100.0;matches=528;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001476
ChrX	stalkie_big_nohaplotig	exon	25025449	25025587	100	-	.	Parent=FBgn0023211.3.mrna1;Target=FBgn0023211.3 390 528 +
ChrX	stalkie_big_nohaplotig	exon	25032260	25032648	100	-	.	Parent=FBgn0023211.3.mrna1;Target=FBgn0023211.3 1 389 +
ChrX	stalkie_big_nohaplotig	CDS	25025449	25025587	.	-	1	Parent=FBgn0023211.3.mrna1;Target=FBgn0023211.3 390 528 +
ChrX	stalkie_big_nohaplotig	CDS	25032260	25032648	.	-	0	Parent=FBgn0023211.3.mrna1;Target=FBgn0023211.3 1 389 +
ChrX	gffcl	locus	25034053	25035784	.	-	.	ID=RLOC_00001477;geneIDs=FBgn0023211.2.path1;transcripts=FBgn0023211.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25034053	25035784	.	-	.	ID=FBgn0023211.2.mrna1;geneID=FBgn0023211.2.path1;Name=FBgn0023211.2;Dir=sensecoverage=100.0;identity=100.0;matches=387;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001477
ChrX	stalkie_big_nohaplotig	exon	25034053	25034191	100	-	.	Parent=FBgn0023211.2.mrna1;Target=FBgn0023211.2 249 387 +
ChrX	stalkie_big_nohaplotig	exon	25035537	25035784	100	-	.	Parent=FBgn0023211.2.mrna1;Target=FBgn0023211.2 1 248 +
ChrX	stalkie_big_nohaplotig	CDS	25034053	25034191	.	-	1	Parent=FBgn0023211.2.mrna1;Target=FBgn0023211.2 249 387 +
ChrX	stalkie_big_nohaplotig	CDS	25035537	25035784	.	-	0	Parent=FBgn0023211.2.mrna1;Target=FBgn0023211.2 1 248 +
ChrX	gffcl	locus	25037975	25038569	.	-	.	ID=RLOC_00001478;geneIDs=comp146090_c0_seq1.path1;transcripts=comp146090_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25037975	25038569	.	-	.	ID=comp146090_c0_seq1.mrna1;geneID=comp146090_c0_seq1.path1;Name=comp146090_c0_seq1;Dir=indeterminatecoverage=86.4;identity=98.7;matches=587;mismatches=8;indels=0;unknowns=0;Target=comp146090_c0_seq1 633 39 .;CDS_Target=comp146090_c0_seq1 497 138 .;locus=RLOC_00001478
ChrX	stalkie_big_nohaplotig	exon	25037975	25038569	98	-	.	Parent=comp146090_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25038111	25038470	.	-	0	Parent=comp146090_c0_seq1.mrna1
ChrX	gffcl	locus	25057833	25058811	.	-	.	ID=RLOC_00001479;geneIDs=comp148025_c0_seq1.path1;transcripts=comp148025_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25057833	25058811	.	-	.	ID=comp148025_c0_seq1.mrna1;geneID=comp148025_c0_seq1.path1;Name=comp148025_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=713;mismatches=2;indels=1;unknowns=0;Target=comp148025_c0_seq1 268 393 +;locus=RLOC_00001479
ChrX	stalkie_big_nohaplotig	exon	25057833	25058116	100	-	.	Parent=comp148025_c0_seq1.mrna1;Target=comp148025_c0_seq1 433 716 +
ChrX	stalkie_big_nohaplotig	exon	25058381	25058811	99	-	.	Parent=comp148025_c0_seq1.mrna1;Target=comp148025_c0_seq1 1 432 +
ChrX	stalkie_big_nohaplotig	CDS	25058420	25058545	.	-	0	Parent=comp148025_c0_seq1.mrna1
ChrX	gffcl	locus	25068486	25070378	.	-	.	ID=RLOC_00001480;geneIDs=FBgn0023211.4.path1;transcripts=FBgn0023211.4.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25068486	25070378	.	-	.	ID=FBgn0023211.4.mrna1;geneID=FBgn0023211.4.path1;Name=FBgn0023211.4;Dir=sensecoverage=100.0;identity=100.0;matches=609;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001480
ChrX	stalkie_big_nohaplotig	exon	25068486	25068633	100	-	.	Parent=FBgn0023211.4.mrna1;Target=FBgn0023211.4 462 609 +
ChrX	stalkie_big_nohaplotig	exon	25069695	25070112	100	-	.	Parent=FBgn0023211.4.mrna1;Target=FBgn0023211.4 44 461 +
ChrX	stalkie_big_nohaplotig	exon	25070336	25070378	100	-	.	Parent=FBgn0023211.4.mrna1;Target=FBgn0023211.4 1 43 +
ChrX	stalkie_big_nohaplotig	CDS	25068486	25068633	.	-	1	Parent=FBgn0023211.4.mrna1;Target=FBgn0023211.4 462 609 +
ChrX	stalkie_big_nohaplotig	CDS	25069695	25070112	.	-	2	Parent=FBgn0023211.4.mrna1;Target=FBgn0023211.4 44 461 +
ChrX	stalkie_big_nohaplotig	CDS	25070336	25070378	.	-	0	Parent=FBgn0023211.4.mrna1;Target=FBgn0023211.4 1 43 +
ChrX	gffcl	locus	25073602	25078042	.	+	.	ID=RLOC_00001481;geneIDs=FBgn0031974.1.path1;transcripts=FBgn0031974.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25073602	25078042	.	+	.	ID=FBgn0031974.1.mrna1;geneID=FBgn0031974.1.path1;Name=FBgn0031974.1;Dir=sensecoverage=99.4;identity=100.0;matches=939;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001481
ChrX	stalkie_big_nohaplotig	exon	25073602	25073886	100	+	.	Parent=FBgn0031974.1.mrna1;Target=FBgn0031974.1 7 291 +
ChrX	stalkie_big_nohaplotig	exon	25075264	25075517	100	+	.	Parent=FBgn0031974.1.mrna1;Target=FBgn0031974.1 292 545 +
ChrX	stalkie_big_nohaplotig	exon	25077580	25077756	100	+	.	Parent=FBgn0031974.1.mrna1;Target=FBgn0031974.1 546 722 +
ChrX	stalkie_big_nohaplotig	exon	25077820	25078042	100	+	.	Parent=FBgn0031974.1.mrna1;Target=FBgn0031974.1 723 945 +
ChrX	stalkie_big_nohaplotig	CDS	25073602	25073886	.	+	0	Parent=FBgn0031974.1.mrna1;Target=FBgn0031974.1 7 291 +
ChrX	stalkie_big_nohaplotig	CDS	25075264	25075517	.	+	0	Parent=FBgn0031974.1.mrna1;Target=FBgn0031974.1 292 545 +
ChrX	stalkie_big_nohaplotig	CDS	25077580	25077756	.	+	1	Parent=FBgn0031974.1.mrna1;Target=FBgn0031974.1 546 722 +
ChrX	stalkie_big_nohaplotig	CDS	25077820	25078042	.	+	1	Parent=FBgn0031974.1.mrna1;Target=FBgn0031974.1 723 945 +
ChrX	gffcl	locus	25084321	25084902	.	-	.	ID=RLOC_00001482;geneIDs=FBgn0029996.2.path1;transcripts=FBgn0029996.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25084321	25084902	.	-	.	ID=FBgn0029996.2.mrna1;geneID=FBgn0029996.2.path1;Name=FBgn0029996.2;Dir=indeterminatecoverage=100.0;identity=99.8;matches=581;mismatches=1;indels=0;unknowns=0;Target=FBgn0029996.2 582 1 .;locus=RLOC_00001482
ChrX	stalkie_big_nohaplotig	exon	25084321	25084902	99	-	.	Parent=FBgn0029996.2.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25084321	25084902	.	-	0	Parent=FBgn0029996.2.mrna1
ChrX	gffcl	locus	25090080	25090637	.	-	.	ID=RLOC_00001483;geneIDs=FBgn0029996.1.path1;transcripts=FBgn0029996.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25090080	25090637	.	-	.	ID=FBgn0029996.1.mrna1;geneID=FBgn0029996.1.path1;Name=FBgn0029996.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=556;mismatches=2;indels=0;unknowns=0;Target=FBgn0029996.1 558 1 .;locus=RLOC_00001483
ChrX	stalkie_big_nohaplotig	exon	25090080	25090637	99	-	.	Parent=FBgn0029996.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25090080	25090637	.	-	0	Parent=FBgn0029996.1.mrna1
ChrX	gffcl	locus	25103715	25104381	.	-	.	ID=RLOC_00001485;geneIDs=FBgn0029996.4.path1;transcripts=FBgn0029996.4.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25103715	25104381	.	-	.	ID=FBgn0029996.4.mrna1;geneID=FBgn0029996.4.path1;Name=FBgn0029996.4;Dir=indeterminatecoverage=98.8;identity=99.6;matches=664;mismatches=3;indels=0;unknowns=0;Target=FBgn0029996.4 675 9 .;CDS_Target=FBgn0029996.4 675 10 .;locus=RLOC_00001485
ChrX	stalkie_big_nohaplotig	exon	25103715	25104381	99	-	.	Parent=FBgn0029996.4.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25103715	25104380	.	-	0	Parent=FBgn0029996.4.mrna1
ChrX	gffcl	locus	25116226	25117295	.	-	.	ID=RLOC_00001486;geneIDs=FBgn0031974.2.path1;transcripts=FBgn0031974.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25116226	25117295	.	-	.	ID=FBgn0031974.2.mrna1;geneID=FBgn0031974.2.path1;Name=FBgn0031974.2;Dir=sensecoverage=100.0;identity=99.4;matches=823;mismatches=5;indels=0;unknowns=0;locus=RLOC_00001486
ChrX	stalkie_big_nohaplotig	exon	25116226	25116451	100	-	.	Parent=FBgn0031974.2.mrna1;Target=FBgn0031974.2 603 828 +
ChrX	stalkie_big_nohaplotig	exon	25116562	25116738	100	-	.	Parent=FBgn0031974.2.mrna1;Target=FBgn0031974.2 426 602 +
ChrX	stalkie_big_nohaplotig	exon	25116807	25117039	99	-	.	Parent=FBgn0031974.2.mrna1;Target=FBgn0031974.2 193 425 +
ChrX	stalkie_big_nohaplotig	exon	25117104	25117295	97	-	.	Parent=FBgn0031974.2.mrna1;Target=FBgn0031974.2 1 192 +
ChrX	stalkie_big_nohaplotig	CDS	25116226	25116451	.	-	1	Parent=FBgn0031974.2.mrna1;Target=FBgn0031974.2 603 828 +
ChrX	stalkie_big_nohaplotig	CDS	25116562	25116738	.	-	1	Parent=FBgn0031974.2.mrna1;Target=FBgn0031974.2 426 602 +
ChrX	stalkie_big_nohaplotig	CDS	25116807	25117039	.	-	0	Parent=FBgn0031974.2.mrna1;Target=FBgn0031974.2 193 425 +
ChrX	stalkie_big_nohaplotig	CDS	25117104	25117295	.	-	0	Parent=FBgn0031974.2.mrna1;Target=FBgn0031974.2 1 192 +
ChrX	gffcl	locus	25125306	25125770	.	+	.	ID=RLOC_00001488;geneIDs=comp140045_c0_seq1.path1;transcripts=comp140045_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25125306	25125770	.	+	.	ID=comp140045_c0_seq1.mrna1;geneID=comp140045_c0_seq1.path1;Name=comp140045_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=465;mismatches=0;indels=0;unknowns=0;Target=comp140045_c0_seq1 465 1 .;CDS_Target=comp140045_c0_seq1 230 3 .;locus=RLOC_00001488
ChrX	stalkie_big_nohaplotig	exon	25125306	25125770	100	+	.	Parent=comp140045_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25125308	25125535	.	+	0	Parent=comp140045_c0_seq1.mrna1
ChrX	gffcl	locus	25125871	25127630	.	-	.	ID=RLOC_00001489;geneIDs=FBgn0032670.1.path1;transcripts=FBgn0032670.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25125871	25127630	.	-	.	ID=FBgn0032670.1.mrna1;geneID=FBgn0032670.1.path1;Name=FBgn0032670.1;Dir=sensecoverage=100.0;identity=100.0;matches=921;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001489
ChrX	stalkie_big_nohaplotig	exon	25125871	25126099	100	-	.	Parent=FBgn0032670.1.mrna1;Target=FBgn0032670.1 693 921 +
ChrX	stalkie_big_nohaplotig	exon	25126170	25126346	100	-	.	Parent=FBgn0032670.1.mrna1;Target=FBgn0032670.1 516 692 +
ChrX	stalkie_big_nohaplotig	exon	25127062	25127291	100	-	.	Parent=FBgn0032670.1.mrna1;Target=FBgn0032670.1 286 515 +
ChrX	stalkie_big_nohaplotig	exon	25127346	25127630	100	-	.	Parent=FBgn0032670.1.mrna1;Target=FBgn0032670.1 1 285 +
ChrX	stalkie_big_nohaplotig	CDS	25125871	25126099	.	-	1	Parent=FBgn0032670.1.mrna1;Target=FBgn0032670.1 693 921 +
ChrX	stalkie_big_nohaplotig	CDS	25126170	25126346	.	-	1	Parent=FBgn0032670.1.mrna1;Target=FBgn0032670.1 516 692 +
ChrX	stalkie_big_nohaplotig	CDS	25127062	25127291	.	-	0	Parent=FBgn0032670.1.mrna1;Target=FBgn0032670.1 286 515 +
ChrX	stalkie_big_nohaplotig	CDS	25127346	25127630	.	-	0	Parent=FBgn0032670.1.mrna1;Target=FBgn0032670.1 1 285 +
ChrX	gffcl	locus	25128665	25132181	.	-	.	ID=RLOC_00001490;geneIDs=FBgn0032670.2.path1;transcripts=FBgn0032670.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25128665	25132181	.	-	.	ID=FBgn0032670.2.mrna1;geneID=FBgn0032670.2.path1;Name=FBgn0032670.2;Dir=sensecoverage=100.0;identity=98.8;matches=969;mismatches=0;indels=12;unknowns=0;locus=RLOC_00001490
ChrX	stalkie_big_nohaplotig	exon	25128665	25128914	100	-	.	Parent=FBgn0032670.2.mrna1;Target=FBgn0032670.2 732 981 +
ChrX	stalkie_big_nohaplotig	exon	25129010	25129186	100	-	.	Parent=FBgn0032670.2.mrna1;Target=FBgn0032670.2 555 731 +
ChrX	stalkie_big_nohaplotig	exon	25129687	25129919	100	-	.	Parent=FBgn0032670.2.mrna1;Target=FBgn0032670.2 322 554 +
ChrX	stalkie_big_nohaplotig	exon	25130048	25130268	100	-	.	Parent=FBgn0032670.2.mrna1;Target=FBgn0032670.2 101 321 +
ChrX	stalkie_big_nohaplotig	exon	25132094	25132181	88	-	.	Parent=FBgn0032670.2.mrna1;Target=FBgn0032670.2 1 100 +
ChrX	stalkie_big_nohaplotig	CDS	25128665	25128914	.	-	1	Parent=FBgn0032670.2.mrna1;Target=FBgn0032670.2 732 981 +
ChrX	stalkie_big_nohaplotig	CDS	25129010	25129186	.	-	1	Parent=FBgn0032670.2.mrna1;Target=FBgn0032670.2 555 731 +
ChrX	stalkie_big_nohaplotig	CDS	25129687	25129919	.	-	0	Parent=FBgn0032670.2.mrna1;Target=FBgn0032670.2 322 554 +
ChrX	stalkie_big_nohaplotig	CDS	25130048	25130268	.	-	2	Parent=FBgn0032670.2.mrna1;Target=FBgn0032670.2 101 321 +
ChrX	stalkie_big_nohaplotig	CDS	25132094	25132181	.	-	0	Parent=FBgn0032670.2.mrna1;Target=FBgn0032670.2 1 100 +
ChrX	stalkie_big_nohaplotig	mRNA	25162800	25170903	.	-	.	ID=comp142611_c0_seq1.mrna1;geneID=comp142611_c0_seq1.path1;Name=comp142611_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=655;mismatches=0;indels=0;unknowns=0;Target=comp142611_c0_seq1 509 568 +;locus=RLOC_00001491
ChrX	stalkie_big_nohaplotig	exon	25162800	25162822	100	-	.	Parent=comp142611_c0_seq1.mrna1;Target=comp142611_c0_seq1 633 655 +
ChrX	stalkie_big_nohaplotig	exon	25170272	25170903	100	-	.	Parent=comp142611_c0_seq1.mrna1;Target=comp142611_c0_seq1 1 632 +
ChrX	stalkie_big_nohaplotig	CDS	25170336	25170395	.	-	0	Parent=comp142611_c0_seq1.mrna1
ChrX	gffcl	locus	25142998	25143732	.	-	.	ID=RLOC_00001492;geneIDs=comp155011_c0_seq1.path1;transcripts=comp155011_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25142998	25143732	.	-	.	ID=comp155011_c0_seq1.mrna1;geneID=comp155011_c0_seq1.path1;Name=comp155011_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.9;matches=727;mismatches=8;indels=0;unknowns=0;Target=comp155011_c0_seq1 736 2 .;CDS_Target=comp155011_c0_seq1 17 3 .;locus=RLOC_00001492
ChrX	stalkie_big_nohaplotig	exon	25142998	25143732	98	-	.	Parent=comp155011_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25143717	25143731	.	-	0	Parent=comp155011_c0_seq1.mrna1
ChrX	gffcl	locus	25178803	25194089	.	-	.	ID=RLOC_00001493;geneIDs=FBgn0025687.1.path1;transcripts=FBgn0025687.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25178803	25194089	.	-	.	ID=FBgn0025687.1.mrna1;geneID=FBgn0025687.1.path1;Name=FBgn0025687.1;Dir=sensecoverage=100.0;identity=100.0;matches=2898;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001493
ChrX	stalkie_big_nohaplotig	exon	25178803	25178918	100	-	.	Parent=FBgn0025687.1.mrna1;Target=FBgn0025687.1 2783 2898 +
ChrX	stalkie_big_nohaplotig	exon	25178986	25179162	100	-	.	Parent=FBgn0025687.1.mrna1;Target=FBgn0025687.1 2606 2782 +
ChrX	stalkie_big_nohaplotig	exon	25179945	25181029	100	-	.	Parent=FBgn0025687.1.mrna1;Target=FBgn0025687.1 1521 2605 +
ChrX	stalkie_big_nohaplotig	exon	25181092	25181162	100	-	.	Parent=FBgn0025687.1.mrna1;Target=FBgn0025687.1 1450 1520 +
ChrX	stalkie_big_nohaplotig	exon	25181762	25182336	100	-	.	Parent=FBgn0025687.1.mrna1;Target=FBgn0025687.1 875 1449 +
ChrX	stalkie_big_nohaplotig	exon	25183639	25184017	100	-	.	Parent=FBgn0025687.1.mrna1;Target=FBgn0025687.1 496 874 +
ChrX	stalkie_big_nohaplotig	exon	25184102	25184278	100	-	.	Parent=FBgn0025687.1.mrna1;Target=FBgn0025687.1 319 495 +
ChrX	stalkie_big_nohaplotig	exon	25189757	25189903	100	-	.	Parent=FBgn0025687.1.mrna1;Target=FBgn0025687.1 172 318 +
ChrX	stalkie_big_nohaplotig	exon	25193919	25194089	100	-	.	Parent=FBgn0025687.1.mrna1;Target=FBgn0025687.1 1 171 +
ChrX	stalkie_big_nohaplotig	CDS	25178803	25178918	.	-	2	Parent=FBgn0025687.1.mrna1;Target=FBgn0025687.1 2783 2898 +
ChrX	stalkie_big_nohaplotig	CDS	25178986	25179162	.	-	2	Parent=FBgn0025687.1.mrna1;Target=FBgn0025687.1 2606 2782 +
ChrX	stalkie_big_nohaplotig	CDS	25179945	25181029	.	-	1	Parent=FBgn0025687.1.mrna1;Target=FBgn0025687.1 1521 2605 +
ChrX	stalkie_big_nohaplotig	CDS	25181092	25181162	.	-	0	Parent=FBgn0025687.1.mrna1;Target=FBgn0025687.1 1450 1520 +
ChrX	stalkie_big_nohaplotig	CDS	25181762	25182336	.	-	2	Parent=FBgn0025687.1.mrna1;Target=FBgn0025687.1 875 1449 +
ChrX	stalkie_big_nohaplotig	CDS	25183639	25184017	.	-	0	Parent=FBgn0025687.1.mrna1;Target=FBgn0025687.1 496 874 +
ChrX	stalkie_big_nohaplotig	CDS	25184102	25184278	.	-	0	Parent=FBgn0025687.1.mrna1;Target=FBgn0025687.1 319 495 +
ChrX	stalkie_big_nohaplotig	CDS	25189757	25189903	.	-	0	Parent=FBgn0025687.1.mrna1;Target=FBgn0025687.1 172 318 +
ChrX	stalkie_big_nohaplotig	CDS	25193919	25194089	.	-	0	Parent=FBgn0025687.1.mrna1;Target=FBgn0025687.1 1 171 +
ChrX	gffcl	locus	25203716	25219338	.	-	.	ID=RLOC_00001494;geneIDs=FBgn0031950.1.path1;transcripts=FBgn0031950.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25203716	25219338	.	-	.	ID=FBgn0031950.1.mrna1;geneID=FBgn0031950.1.path1;Name=FBgn0031950.1;Dir=sensecoverage=99.9;identity=99.1;matches=1673;mismatches=3;indels=12;unknowns=0;locus=RLOC_00001494
ChrX	stalkie_big_nohaplotig	exon	25203716	25204112	100	-	.	Parent=FBgn0031950.1.mrna1;Target=FBgn0031950.1 1281 1677 +
ChrX	stalkie_big_nohaplotig	exon	25204171	25204575	99	-	.	Parent=FBgn0031950.1.mrna1;Target=FBgn0031950.1 876 1280 +
ChrX	stalkie_big_nohaplotig	exon	25204655	25205268	98	-	.	Parent=FBgn0031950.1.mrna1;Target=FBgn0031950.1 274 875 +
ChrX	stalkie_big_nohaplotig	exon	25218954	25219055	100	-	.	Parent=FBgn0031950.1.mrna1;Target=FBgn0031950.1 172 273 +
ChrX	stalkie_big_nohaplotig	exon	25219169	25219338	98	-	.	Parent=FBgn0031950.1.mrna1;Target=FBgn0031950.1 2 171 +
ChrX	stalkie_big_nohaplotig	CDS	25203716	25204112	.	-	1	Parent=FBgn0031950.1.mrna1;Target=FBgn0031950.1 1281 1677 +
ChrX	stalkie_big_nohaplotig	CDS	25204171	25204575	.	-	1	Parent=FBgn0031950.1.mrna1;Target=FBgn0031950.1 876 1280 +
ChrX	stalkie_big_nohaplotig	CDS	25204655	25205268	.	-	0	Parent=FBgn0031950.1.mrna1;Target=FBgn0031950.1 274 875 +
ChrX	stalkie_big_nohaplotig	CDS	25218954	25219055	.	-	0	Parent=FBgn0031950.1.mrna1;Target=FBgn0031950.1 172 273 +
ChrX	stalkie_big_nohaplotig	CDS	25219169	25219336	.	-	0	Parent=FBgn0031950.1.mrna1;Target=FBgn0031950.1 4 171 +
ChrX	gffcl	locus	25214941	25215435	.	-	.	ID=RLOC_00001495;geneIDs=comp81074_c0_seq1.path1;transcripts=comp81074_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25214941	25215435	.	-	.	ID=comp81074_c0_seq1.mrna1;geneID=comp81074_c0_seq1.path1;Name=comp81074_c0_seq1;Dir=indeterminatecoverage=97.6;identity=99.4;matches=493;mismatches=2;indels=1;unknowns=0;Target=comp81074_c0_seq1 508 13 .;CDS_Target=comp81074_c0_seq1 507 433 .;locus=RLOC_00001495
ChrX	stalkie_big_nohaplotig	exon	25214941	25215435	99	-	.	Parent=comp81074_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25214942	25215016	.	-	0	Parent=comp81074_c0_seq1.mrna1
ChrX	gffcl	locus	25219440	25220073	.	-	.	ID=RLOC_00001496;geneIDs=comp144404_c0_seq1.path1;transcripts=comp144404_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25219440	25220073	.	-	.	ID=comp144404_c0_seq1.mrna1;geneID=comp144404_c0_seq1.path1;Name=comp144404_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=378;mismatches=2;indels=0;unknowns=0;Target=comp144404_c0_seq1 1 192 +;locus=RLOC_00001496
ChrX	stalkie_big_nohaplotig	exon	25219440	25219485	95	-	.	Parent=comp144404_c0_seq1.mrna1;Target=comp144404_c0_seq1 335 380 +
ChrX	stalkie_big_nohaplotig	exon	25219740	25220073	100	-	.	Parent=comp144404_c0_seq1.mrna1;Target=comp144404_c0_seq1 1 334 +
ChrX	stalkie_big_nohaplotig	CDS	25219882	25220073	.	-	0	Parent=comp144404_c0_seq1.mrna1
ChrX	gffcl	locus	25239482	25240108	.	+	.	ID=RLOC_00001498;geneIDs=comp160243_c0_seq1.path1;transcripts=comp160243_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25239482	25240108	.	+	.	ID=comp160243_c0_seq1.mrna1;geneID=comp160243_c0_seq1.path1;Name=comp160243_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=627;mismatches=0;indels=0;unknowns=0;Target=comp160243_c0_seq1 627 1 .;CDS_Target=comp160243_c0_seq1 48 1 .;locus=RLOC_00001498
ChrX	stalkie_big_nohaplotig	exon	25239482	25240108	100	+	.	Parent=comp160243_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25239482	25239529	.	+	0	Parent=comp160243_c0_seq1.mrna1
ChrX	gffcl	locus	25243060	25244248	.	-	.	ID=RLOC_00001499;geneIDs=FBgn0032378.1.path1;transcripts=FBgn0032378.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25243060	25244248	.	-	.	ID=FBgn0032378.1.mrna1;geneID=FBgn0032378.1.path1;Name=FBgn0032378.1;Dir=sensecoverage=100.0;identity=100.0;matches=1113;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001499
ChrX	stalkie_big_nohaplotig	exon	25243060	25243439	100	-	.	Parent=FBgn0032378.1.mrna1;Target=FBgn0032378.1 734 1113 +
ChrX	stalkie_big_nohaplotig	exon	25243516	25244248	100	-	.	Parent=FBgn0032378.1.mrna1;Target=FBgn0032378.1 1 733 +
ChrX	stalkie_big_nohaplotig	CDS	25243060	25243439	.	-	2	Parent=FBgn0032378.1.mrna1;Target=FBgn0032378.1 734 1113 +
ChrX	stalkie_big_nohaplotig	CDS	25243516	25244248	.	-	0	Parent=FBgn0032378.1.mrna1;Target=FBgn0032378.1 1 733 +
ChrX	gffcl	locus	25244443	25263065	.	-	.	ID=RLOC_00001500;geneIDs=comp152964_c0_seq1.path1;transcripts=comp152964_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25244443	25263065	.	-	.	ID=comp152964_c0_seq1.mrna1;geneID=comp152964_c0_seq1.path1;Name=comp152964_c0_seq1;Dir=antisensecoverage=99.7;identity=99.7;matches=988;mismatches=3;indels=0;unknowns=0;locus=RLOC_00001500
ChrX	stalkie_big_nohaplotig	exon	25244443	25244828	99	-	.	Parent=comp152964_c0_seq1.mrna1;Target=comp152964_c0_seq1 1 386 -
ChrX	stalkie_big_nohaplotig	exon	25262461	25263065	100	-	.	Parent=comp152964_c0_seq1.mrna1;Target=comp152964_c0_seq1 387 991 -
ChrX	stalkie_big_nohaplotig	CDS	25244787	25244828	.	-	0	Parent=comp152964_c0_seq1.mrna1;Target=comp152964_c0_seq1 345 386 .
ChrX	stalkie_big_nohaplotig	CDS	25262461	25262508	.	-	0	Parent=comp152964_c0_seq1.mrna1;Target=comp152964_c0_seq1 387 434 .
ChrX	gffcl	locus	25268164	25268515	.	+	.	ID=RLOC_00001501;geneIDs=comp476288_c0_seq1.path1;transcripts=comp476288_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25268164	25268515	.	+	.	ID=comp476288_c0_seq1.mrna1;geneID=comp476288_c0_seq1.path1;Name=comp476288_c0_seq1;Dir=indeterminatecoverage=97.8;identity=100.0;matches=352;mismatches=0;indels=0;unknowns=0;Target=comp476288_c0_seq1 352 1 .;CDS_Target=comp476288_c0_seq1 213 121 .;locus=RLOC_00001501
ChrX	stalkie_big_nohaplotig	exon	25268164	25268515	100	+	.	Parent=comp476288_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25268284	25268376	.	+	0	Parent=comp476288_c0_seq1.mrna1
ChrX	gffcl	locus	25270711	25271464	.	+	.	ID=RLOC_00001502;geneIDs=comp153342_c0_seq1.path1;transcripts=comp153342_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25270711	25271464	.	+	.	ID=comp153342_c0_seq1.mrna1;geneID=comp153342_c0_seq1.path1;Name=comp153342_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=752;mismatches=2;indels=0;unknowns=0;Target=comp153342_c0_seq1 754 1 .;CDS_Target=comp153342_c0_seq1 261 61 .;locus=RLOC_00001502
ChrX	stalkie_big_nohaplotig	exon	25270711	25271464	99	+	.	Parent=comp153342_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25270771	25270971	.	+	0	Parent=comp153342_c0_seq1.mrna1
ChrX	gffcl	locus	25271826	25272102	.	+	.	ID=RLOC_00001503;geneIDs=comp72124_c0_seq1.path1;transcripts=comp72124_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25271826	25272102	.	+	.	ID=comp72124_c0_seq1.mrna1;geneID=comp72124_c0_seq1.path1;Name=comp72124_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=275;mismatches=2;indels=0;unknowns=0;Target=comp72124_c0_seq1 277 1 .;CDS_Target=comp72124_c0_seq1 141 1 .;locus=RLOC_00001503
ChrX	stalkie_big_nohaplotig	exon	25271826	25272102	99	+	.	Parent=comp72124_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25271826	25271966	.	+	0	Parent=comp72124_c0_seq1.mrna1
ChrX	gffcl	locus	25276220	25276558	.	-	.	ID=RLOC_00001505;geneIDs=comp95752_c0_seq1.path1;transcripts=comp95752_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25276220	25276558	.	-	.	ID=comp95752_c0_seq1.mrna1;geneID=comp95752_c0_seq1.path1;Name=comp95752_c0_seq1;Dir=indeterminatecoverage=96.3;identity=100.0;matches=339;mismatches=0;indels=0;unknowns=0;Target=comp95752_c0_seq1 339 1 .;CDS_Target=comp95752_c0_seq1 134 57 .;locus=RLOC_00001505
ChrX	stalkie_big_nohaplotig	exon	25276220	25276558	100	-	.	Parent=comp95752_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25276425	25276502	.	-	0	Parent=comp95752_c0_seq1.mrna1
ChrX	gffcl	locus	25278274	25488636	.	-	.	ID=RLOC_00001506;geneIDs=FBgn0259225.1.path1;transcripts=FBgn0259225.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25278274	25488636	.	-	.	ID=FBgn0259225.1.mrna1;geneID=FBgn0259225.1.path1;Name=FBgn0259225.1;Dir=sensecoverage=100.0;identity=100.0;matches=2988;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001506
ChrX	stalkie_big_nohaplotig	exon	25278274	25278386	100	-	.	Parent=FBgn0259225.1.mrna1;Target=FBgn0259225.1 2876 2988 +
ChrX	stalkie_big_nohaplotig	exon	25289196	25290342	100	-	.	Parent=FBgn0259225.1.mrna1;Target=FBgn0259225.1 1729 2875 +
ChrX	stalkie_big_nohaplotig	exon	25293023	25293272	100	-	.	Parent=FBgn0259225.1.mrna1;Target=FBgn0259225.1 1479 1728 +
ChrX	stalkie_big_nohaplotig	exon	25348586	25348699	100	-	.	Parent=FBgn0259225.1.mrna1;Target=FBgn0259225.1 1365 1478 +
ChrX	stalkie_big_nohaplotig	exon	25350472	25351066	100	-	.	Parent=FBgn0259225.1.mrna1;Target=FBgn0259225.1 770 1364 +
ChrX	stalkie_big_nohaplotig	exon	25357005	25357283	100	-	.	Parent=FBgn0259225.1.mrna1;Target=FBgn0259225.1 491 769 +
ChrX	stalkie_big_nohaplotig	exon	25488147	25488636	100	-	.	Parent=FBgn0259225.1.mrna1;Target=FBgn0259225.1 1 490 +
ChrX	stalkie_big_nohaplotig	CDS	25278274	25278386	.	-	2	Parent=FBgn0259225.1.mrna1;Target=FBgn0259225.1 2876 2988 +
ChrX	stalkie_big_nohaplotig	CDS	25289196	25290342	.	-	0	Parent=FBgn0259225.1.mrna1;Target=FBgn0259225.1 1729 2875 +
ChrX	stalkie_big_nohaplotig	CDS	25293023	25293272	.	-	1	Parent=FBgn0259225.1.mrna1;Target=FBgn0259225.1 1479 1728 +
ChrX	stalkie_big_nohaplotig	CDS	25348586	25348699	.	-	1	Parent=FBgn0259225.1.mrna1;Target=FBgn0259225.1 1365 1478 +
ChrX	stalkie_big_nohaplotig	CDS	25350472	25351066	.	-	2	Parent=FBgn0259225.1.mrna1;Target=FBgn0259225.1 770 1364 +
ChrX	stalkie_big_nohaplotig	CDS	25357005	25357283	.	-	2	Parent=FBgn0259225.1.mrna1;Target=FBgn0259225.1 491 769 +
ChrX	stalkie_big_nohaplotig	CDS	25488147	25488636	.	-	0	Parent=FBgn0259225.1.mrna1;Target=FBgn0259225.1 1 490 +
ChrX	gffcl	locus	25364133	25364521	.	+	.	ID=RLOC_00001507;geneIDs=comp114380_c0_seq1.path1;transcripts=comp114380_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25364133	25364521	.	+	.	ID=comp114380_c0_seq1.mrna1;geneID=comp114380_c0_seq1.path1;Name=comp114380_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=389;mismatches=0;indels=0;unknowns=0;Target=comp114380_c0_seq1 389 1 .;CDS_Target=comp114380_c0_seq1 181 2 .;locus=RLOC_00001507
ChrX	stalkie_big_nohaplotig	exon	25364133	25364521	100	+	.	Parent=comp114380_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25364134	25364313	.	+	0	Parent=comp114380_c0_seq1.mrna1
ChrX	gffcl	locus	25368796	25369551	.	+	.	ID=RLOC_00001508;geneIDs=comp149175_c0_seq1.path1;transcripts=comp149175_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25368796	25369551	.	+	.	ID=comp149175_c0_seq1.mrna1;geneID=comp149175_c0_seq1.path1;Name=comp149175_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=756;mismatches=0;indels=1;unknowns=0;Target=comp149175_c0_seq1 757 1 .;CDS_Target=comp149175_c0_seq1 342 103 .;locus=RLOC_00001508
ChrX	stalkie_big_nohaplotig	exon	25368796	25369551	99	+	.	Parent=comp149175_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25368898	25369137	.	+	0	Parent=comp149175_c0_seq1.mrna1
ChrX	gffcl	locus	25372191	25373134	.	-	.	ID=RLOC_00001509;geneIDs=comp148743_c0_seq1.path1;transcripts=comp148743_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25372191	25373134	.	-	.	ID=comp148743_c0_seq1.mrna1;geneID=comp148743_c0_seq1.path1;Name=comp148743_c0_seq1;Dir=indeterminatecoverage=95.6;identity=100.0;matches=944;mismatches=0;indels=0;unknowns=0;Target=comp148743_c0_seq1 966 23 .;CDS_Target=comp148743_c0_seq1 381 142 .;locus=RLOC_00001509
ChrX	stalkie_big_nohaplotig	exon	25372191	25373134	100	-	.	Parent=comp148743_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25372776	25373015	.	-	0	Parent=comp148743_c0_seq1.mrna1
ChrX	gffcl	locus	25384963	25385619	.	+	.	ID=RLOC_00001510;geneIDs=comp149075_c0_seq1.path1;transcripts=comp149075_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25384963	25385619	.	+	.	ID=comp149075_c0_seq1.mrna1;geneID=comp149075_c0_seq1.path1;Name=comp149075_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=657;mismatches=0;indels=0;unknowns=0;Target=comp149075_c0_seq1 657 1 .;CDS_Target=comp149075_c0_seq1 453 289 .;locus=RLOC_00001510
ChrX	stalkie_big_nohaplotig	exon	25384963	25385619	100	+	.	Parent=comp149075_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25385251	25385415	.	+	0	Parent=comp149075_c0_seq1.mrna1
ChrX	gffcl	locus	25389956	25390721	.	-	.	ID=RLOC_00001511;geneIDs=comp123927_c0_seq1.path1;transcripts=comp123927_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25389956	25390721	.	-	.	ID=comp123927_c0_seq1.mrna1;geneID=comp123927_c0_seq1.path1;Name=comp123927_c0_seq1;Dir=indeterminatecoverage=95.6;identity=99.7;matches=764;mismatches=2;indels=0;unknowns=0;Target=comp123927_c0_seq1 798 33 .;CDS_Target=comp123927_c0_seq1 299 231 .;locus=RLOC_00001511
ChrX	stalkie_big_nohaplotig	exon	25389956	25390721	99	-	.	Parent=comp123927_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25390455	25390523	.	-	0	Parent=comp123927_c0_seq1.mrna1
ChrX	gffcl	locus	25411713	25414038	.	+	.	ID=RLOC_00001512;geneIDs=FBgn0032382.1.path1;transcripts=FBgn0032382.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25411713	25414038	.	+	.	ID=FBgn0032382.1.mrna1;geneID=FBgn0032382.1.path1;Name=FBgn0032382.1;Dir=sensecoverage=97.9;identity=100.0;matches=1178;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001512
ChrX	stalkie_big_nohaplotig	exon	25411713	25411877	100	+	.	Parent=FBgn0032382.1.mrna1;Target=FBgn0032382.1 11 175 +
ChrX	stalkie_big_nohaplotig	exon	25411937	25412116	100	+	.	Parent=FBgn0032382.1.mrna1;Target=FBgn0032382.1 176 355 +
ChrX	stalkie_big_nohaplotig	exon	25412999	25413156	100	+	.	Parent=FBgn0032382.1.mrna1;Target=FBgn0032382.1 356 513 +
ChrX	stalkie_big_nohaplotig	exon	25413255	25413542	100	+	.	Parent=FBgn0032382.1.mrna1;Target=FBgn0032382.1 514 801 +
ChrX	stalkie_big_nohaplotig	exon	25413652	25414038	100	+	.	Parent=FBgn0032382.1.mrna1;Target=FBgn0032382.1 802 1188 +
ChrX	stalkie_big_nohaplotig	CDS	25411715	25411877	.	+	0	Parent=FBgn0032382.1.mrna1;Target=FBgn0032382.1 13 175 +
ChrX	stalkie_big_nohaplotig	CDS	25411937	25412116	.	+	2	Parent=FBgn0032382.1.mrna1;Target=FBgn0032382.1 176 355 +
ChrX	stalkie_big_nohaplotig	CDS	25412999	25413156	.	+	2	Parent=FBgn0032382.1.mrna1;Target=FBgn0032382.1 356 513 +
ChrX	stalkie_big_nohaplotig	CDS	25413255	25413542	.	+	0	Parent=FBgn0032382.1.mrna1;Target=FBgn0032382.1 514 801 +
ChrX	stalkie_big_nohaplotig	CDS	25413652	25414038	.	+	0	Parent=FBgn0032382.1.mrna1;Target=FBgn0032382.1 802 1188 +
ChrX	gffcl	locus	25414189	25418069	.	+	.	ID=RLOC_00001513;geneIDs=FBgn0002571.1.path2;transcripts=FBgn0002571.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	25414189	25418069	.	+	.	ID=FBgn0002571.1.mrna2;geneID=FBgn0002571.1.path2;Name=FBgn0002571.1;Dir=sensecoverage=35.7;identity=100.0;matches=687;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001513
ChrX	stalkie_big_nohaplotig	exon	25414189	25414330	100	+	.	Parent=FBgn0002571.1.mrna2;Target=FBgn0002571.1 1240 1381 +
ChrX	stalkie_big_nohaplotig	exon	25414509	25414704	100	+	.	Parent=FBgn0002571.1.mrna2;Target=FBgn0002571.1 1382 1577 +
ChrX	stalkie_big_nohaplotig	exon	25414792	25414932	100	+	.	Parent=FBgn0002571.1.mrna2;Target=FBgn0002571.1 1578 1718 +
ChrX	stalkie_big_nohaplotig	exon	25416554	25416637	100	+	.	Parent=FBgn0002571.1.mrna2;Target=FBgn0002571.1 1719 1802 +
ChrX	stalkie_big_nohaplotig	exon	25417946	25418069	100	+	.	Parent=FBgn0002571.1.mrna2;Target=FBgn0002571.1 1803 1926 +
ChrX	stalkie_big_nohaplotig	CDS	25414189	25414330	.	+	0	Parent=FBgn0002571.1.mrna2;Target=FBgn0002571.1 1240 1381 +
ChrX	stalkie_big_nohaplotig	CDS	25414509	25414704	.	+	2	Parent=FBgn0002571.1.mrna2;Target=FBgn0002571.1 1382 1577 +
ChrX	stalkie_big_nohaplotig	CDS	25414792	25414932	.	+	1	Parent=FBgn0002571.1.mrna2;Target=FBgn0002571.1 1578 1718 +
ChrX	stalkie_big_nohaplotig	CDS	25416554	25416637	.	+	1	Parent=FBgn0002571.1.mrna2;Target=FBgn0002571.1 1719 1802 +
ChrX	stalkie_big_nohaplotig	CDS	25417946	25418069	.	+	1	Parent=FBgn0002571.1.mrna2;Target=FBgn0002571.1 1803 1926 +
ChrX	gffcl	locus	25434664	25435077	.	-	.	ID=RLOC_00001514;geneIDs=comp131165_c0_seq1.path1;transcripts=comp131165_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25434664	25435077	.	-	.	ID=comp131165_c0_seq1.mrna1;geneID=comp131165_c0_seq1.path1;Name=comp131165_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=414;mismatches=0;indels=0;unknowns=0;Target=comp131165_c0_seq1 414 1 .;CDS_Target=comp131165_c0_seq1 219 58 .;locus=RLOC_00001514
ChrX	stalkie_big_nohaplotig	exon	25434664	25435077	100	-	.	Parent=comp131165_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25434859	25435020	.	-	0	Parent=comp131165_c0_seq1.mrna1
ChrX	gffcl	locus	25436751	25438081	.	-	.	ID=RLOC_00001515;geneIDs=comp17315_c0_seq1.path1,comp1905497_c0_seq1.path1;transcripts=comp17315_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25436751	25437687	.	-	.	ID=comp17315_c0_seq1.mrna1;geneID=comp17315_c0_seq1.path1;Name=comp17315_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=934;mismatches=3;indels=0;unknowns=0;Target=comp17315_c0_seq1 937 1 .;CDS_Target=comp17315_c0_seq1 706 491 .;locus=RLOC_00001515
ChrX	stalkie_big_nohaplotig	exon	25436751	25437687	99	-	.	Parent=comp17315_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25436982	25437197	.	-	0	Parent=comp17315_c0_seq1.mrna1
ChrX	gffcl	locus	25439722	25440496	.	-	.	ID=RLOC_00001516;geneIDs=comp142959_c0_seq1.path1;transcripts=comp142959_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25439722	25440496	.	-	.	ID=comp142959_c0_seq1.mrna1;geneID=comp142959_c0_seq1.path1;Name=comp142959_c0_seq1;Dir=antisensecoverage=99.6;identity=99.9;matches=699;mismatches=1;indels=0;unknowns=0;Target=comp142959_c0_seq1 80 352 .;locus=RLOC_00001516
ChrX	stalkie_big_nohaplotig	exon	25439722	25440251	99	-	.	Parent=comp142959_c0_seq1.mrna1;Target=comp142959_c0_seq1 4 533 -
ChrX	stalkie_big_nohaplotig	exon	25440327	25440496	100	-	.	Parent=comp142959_c0_seq1.mrna1;Target=comp142959_c0_seq1 534 703 -
ChrX	stalkie_big_nohaplotig	CDS	25439798	25440070	.	-	0	Parent=comp142959_c0_seq1.mrna1
ChrX	gffcl	locus	25446973	25447668	.	-	.	ID=RLOC_00001517;geneIDs=comp129735_c1_seq1.path1;transcripts=comp129735_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25446973	25447668	.	-	.	ID=comp129735_c1_seq1.mrna1;geneID=comp129735_c1_seq1.path1;Name=comp129735_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=695;mismatches=1;indels=0;unknowns=0;Target=comp129735_c1_seq1 696 1 .;CDS_Target=comp129735_c1_seq1 259 83 .;locus=RLOC_00001517
ChrX	stalkie_big_nohaplotig	exon	25446973	25447668	99	-	.	Parent=comp129735_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25447410	25447586	.	-	0	Parent=comp129735_c1_seq1.mrna1
ChrX	gffcl	locus	25570973	25571247	.	+	.	ID=RLOC_00001518;geneIDs=comp151210_c0_seq1.path1;transcripts=comp151210_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25570973	25571247	.	+	.	ID=comp151210_c0_seq1.mrna1;geneID=comp151210_c0_seq1.path1;Name=comp151210_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=273;mismatches=2;indels=0;unknowns=0;Target=comp151210_c0_seq1 275 1 .;CDS_Target=comp151210_c0_seq1 273 124 .;locus=RLOC_00001518
ChrX	stalkie_big_nohaplotig	exon	25570973	25571247	99	+	.	Parent=comp151210_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25571096	25571245	.	+	0	Parent=comp151210_c0_seq1.mrna1
ChrX	gffcl	locus	25610958	25612497	.	+	.	ID=RLOC_00001520;geneIDs=comp160502_c3_seq1.path1;transcripts=comp160502_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25610958	25612497	.	+	.	ID=comp160502_c3_seq1.mrna1;geneID=comp160502_c3_seq1.path1;Name=comp160502_c3_seq1;Dir=sensecoverage=99.3;identity=98.3;matches=1438;mismatches=25;indels=0;unknowns=0;locus=RLOC_00001520
ChrX	stalkie_big_nohaplotig	exon	25610958	25611738	98	+	.	Parent=comp160502_c3_seq1.mrna1;Target=comp160502_c3_seq1 12 792 +
ChrX	stalkie_big_nohaplotig	exon	25611816	25612497	97	+	.	Parent=comp160502_c3_seq1.mrna1;Target=comp160502_c3_seq1 793 1474 +
ChrX	stalkie_big_nohaplotig	CDS	25611040	25611738	.	+	0	Parent=comp160502_c3_seq1.mrna1;Target=comp160502_c3_seq1 94 792 +
ChrX	stalkie_big_nohaplotig	CDS	25611816	25612487	.	+	0	Parent=comp160502_c3_seq1.mrna1;Target=comp160502_c3_seq1 793 1464 +
ChrX	gffcl	locus	25661897	25663054	.	+	.	ID=RLOC_00001521;geneIDs=ORF1273.path1;transcripts=ORF1273.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25661897	25663054	.	+	.	ID=ORF1273.mrna1;geneID=ORF1273.path1;Name=ORF1273;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1157;mismatches=1;indels=0;unknowns=0;Target=ORF1273 1158 1 .;locus=RLOC_00001521
ChrX	stalkie_big_nohaplotig	exon	25661897	25663054	99	+	.	Parent=ORF1273.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25661897	25663054	.	+	0	Parent=ORF1273.mrna1
ChrX	gffcl	locus	25668727	25669850	.	-	.	ID=RLOC_00001522;geneIDs=comp149817_c1_seq1.path1;transcripts=comp149817_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25668727	25669850	.	-	.	ID=comp149817_c1_seq1.mrna1;geneID=comp149817_c1_seq1.path1;Name=comp149817_c1_seq1;Dir=antisensecoverage=100.0;identity=99.2;matches=926;mismatches=7;indels=0;unknowns=0;Target=comp149817_c1_seq1 189 755 .;locus=RLOC_00001522
ChrX	stalkie_big_nohaplotig	exon	25668727	25668861	100	-	.	Parent=comp149817_c1_seq1.mrna1;Target=comp149817_c1_seq1 1 135 -
ChrX	stalkie_big_nohaplotig	exon	25668946	25669643	98	-	.	Parent=comp149817_c1_seq1.mrna1;Target=comp149817_c1_seq1 136 833 -
ChrX	stalkie_big_nohaplotig	exon	25669751	25669850	100	-	.	Parent=comp149817_c1_seq1.mrna1;Target=comp149817_c1_seq1 834 933 -
ChrX	stalkie_big_nohaplotig	CDS	25668999	25669565	.	-	0	Parent=comp149817_c1_seq1.mrna1
ChrX	gffcl	locus	25670071	25679848	.	+	.	ID=RLOC_00001523;geneIDs=comp161142_c1_seq1.path1;transcripts=comp161142_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25670071	25679848	.	+	.	ID=comp161142_c1_seq1.mrna1;geneID=comp161142_c1_seq1.path1;Name=comp161142_c1_seq1;Dir=antisensecoverage=97.9;identity=98.0;matches=1147;mismatches=20;indels=4;unknowns=0;Target=comp161142_c1_seq1 230 475 .;locus=RLOC_00001523
ChrX	stalkie_big_nohaplotig	exon	25670071	25670255	100	+	.	Parent=comp161142_c1_seq1.mrna1;Target=comp161142_c1_seq1 993 1177 -
ChrX	stalkie_big_nohaplotig	exon	25674808	25674908	100	+	.	Parent=comp161142_c1_seq1.mrna1;Target=comp161142_c1_seq1 892 992 -
ChrX	stalkie_big_nohaplotig	exon	25677714	25677825	100	+	.	Parent=comp161142_c1_seq1.mrna1;Target=comp161142_c1_seq1 780 891 -
ChrX	stalkie_big_nohaplotig	exon	25679080	25679848	96	+	.	Parent=comp161142_c1_seq1.mrna1;Target=comp161142_c1_seq1 7 779 -
ChrX	stalkie_big_nohaplotig	CDS	25679384	25679629	.	+	0	Parent=comp161142_c1_seq1.mrna1
ChrX	gffcl	locus	25719691	26615634	.	+	.	ID=RLOC_00001524;geneIDs=comp156353_c0_seq1.path1;transcripts=comp156353_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25719691	26615634	.	+	.	ID=comp156353_c0_seq1.mrna1;geneID=comp156353_c0_seq1.path1;Name=comp156353_c0_seq1;Dir=antisensecoverage=66.9;identity=93.0;matches=1211;mismatches=57;indels=34;unknowns=0;locus=RLOC_00001524
ChrX	stalkie_big_nohaplotig	exon	25719691	25719696	100	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 1419 1424 -
ChrX	stalkie_big_nohaplotig	exon	25726743	25726745	100	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 1416 1418 -
ChrX	stalkie_big_nohaplotig	exon	25752922	25752932	100	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 1405 1415 -
ChrX	stalkie_big_nohaplotig	exon	25760691	25760697	57	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 1398 1404 -
ChrX	stalkie_big_nohaplotig	exon	25766267	25766273	100	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 1391 1397 -
ChrX	stalkie_big_nohaplotig	exon	25769056	25769057	100	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 1389 1390 -
ChrX	stalkie_big_nohaplotig	exon	25771129	25771130	100	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 1387 1388 -
ChrX	stalkie_big_nohaplotig	exon	25771135	25771140	100	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 1342 1347 -
ChrX	stalkie_big_nohaplotig	exon	25771364	25771375	91	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 1330 1341 -
ChrX	stalkie_big_nohaplotig	exon	25772421	25772481	54	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 1263 1329 -
ChrX	stalkie_big_nohaplotig	exon	25782467	25782474	100	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 1255 1262 -
ChrX	stalkie_big_nohaplotig	exon	25782988	25782989	100	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 1253 1254 -
ChrX	stalkie_big_nohaplotig	exon	25786347	25786349	100	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 1250 1252 -
ChrX	stalkie_big_nohaplotig	exon	25786362	25786369	100	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 1201 1208 -
ChrX	stalkie_big_nohaplotig	exon	25786604	25786618	39	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 1168 1200 -
ChrX	stalkie_big_nohaplotig	exon	25789687	25789696	100	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 1158 1167 -
ChrX	stalkie_big_nohaplotig	exon	25797482	25797487	100	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 1113 1118 -
ChrX	stalkie_big_nohaplotig	exon	25803326	25803365	60	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 1070 1112 -
ChrX	stalkie_big_nohaplotig	exon	25810213	25810216	75	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 1066 1069 -
ChrX	stalkie_big_nohaplotig	exon	25829168	25829180	100	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 1053 1065 -
ChrX	stalkie_big_nohaplotig	exon	25835964	25835968	80	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 1048 1052 -
ChrX	stalkie_big_nohaplotig	exon	26613656	26613729	97	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 974 1047 -
ChrX	stalkie_big_nohaplotig	exon	26613789	26613878	100	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 884 973 -
ChrX	stalkie_big_nohaplotig	exon	26613933	26614195	97	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 621 883 -
ChrX	stalkie_big_nohaplotig	exon	26615023	26615634	98	+	.	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 8 620 -
ChrX	stalkie_big_nohaplotig	CDS	26614019	26614195	.	+	0	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 621 797 .
ChrX	stalkie_big_nohaplotig	CDS	26615023	26615147	.	+	0	Parent=comp156353_c0_seq1.mrna1;Target=comp156353_c0_seq1 495 620 .
ChrX	gffcl	locus	25749975	25751682	.	+	.	ID=RLOC_00001525;geneIDs=ORF1350.path1;transcripts=ORF1350.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25749975	25751682	.	+	.	ID=ORF1350.mrna1;geneID=ORF1350.path1;Name=ORF1350;Dir=sensecoverage=100.0;identity=99.9;matches=1130;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001525
ChrX	stalkie_big_nohaplotig	exon	25749975	25750038	100	+	.	Parent=ORF1350.mrna1;Target=ORF1350 1 64 +
ChrX	stalkie_big_nohaplotig	exon	25750538	25750610	100	+	.	Parent=ORF1350.mrna1;Target=ORF1350 65 137 +
ChrX	stalkie_big_nohaplotig	exon	25750689	25751682	99	+	.	Parent=ORF1350.mrna1;Target=ORF1350 138 1131 +
ChrX	stalkie_big_nohaplotig	CDS	25749975	25750038	.	+	0	Parent=ORF1350.mrna1;Target=ORF1350 1 64 +
ChrX	stalkie_big_nohaplotig	CDS	25750538	25750610	.	+	2	Parent=ORF1350.mrna1;Target=ORF1350 65 137 +
ChrX	stalkie_big_nohaplotig	CDS	25750689	25751682	.	+	1	Parent=ORF1350.mrna1;Target=ORF1350 138 1131 +
ChrX	gffcl	locus	25854226	27781980	.	-	.	ID=RLOC_00001526;geneIDs=comp115861_c0_seq1.path1;transcripts=comp115861_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25854226	27781980	.	-	.	ID=comp115861_c0_seq1.mrna1;geneID=comp115861_c0_seq1.path1;Name=comp115861_c0_seq1;Dir=indeterminatecoverage=77.1;identity=97.9;matches=524;mismatches=11;indels=0;unknowns=0;Target=comp115861_c0_seq1 114 1 .;locus=RLOC_00001526
ChrX	stalkie_big_nohaplotig	exon	25854226	25854230	100	-	.	Parent=comp115861_c0_seq1.mrna1;Target=comp115861_c0_seq1 535 531 .
ChrX	stalkie_big_nohaplotig	exon	25857739	25857740	100	-	.	Parent=comp115861_c0_seq1.mrna1;Target=comp115861_c0_seq1 530 529 .
ChrX	stalkie_big_nohaplotig	exon	25863723	25863729	100	-	.	Parent=comp115861_c0_seq1.mrna1;Target=comp115861_c0_seq1 528 522 .
ChrX	stalkie_big_nohaplotig	exon	25870880	25870888	100	-	.	Parent=comp115861_c0_seq1.mrna1;Target=comp115861_c0_seq1 521 513 .
ChrX	stalkie_big_nohaplotig	exon	25875276	25875284	88	-	.	Parent=comp115861_c0_seq1.mrna1;Target=comp115861_c0_seq1 512 504 .
ChrX	stalkie_big_nohaplotig	exon	25885469	25885472	100	-	.	Parent=comp115861_c0_seq1.mrna1;Target=comp115861_c0_seq1 503 500 .
ChrX	stalkie_big_nohaplotig	exon	25889996	25890005	100	-	.	Parent=comp115861_c0_seq1.mrna1;Target=comp115861_c0_seq1 499 490 .
ChrX	stalkie_big_nohaplotig	exon	25904841	25904851	81	-	.	Parent=comp115861_c0_seq1.mrna1;Target=comp115861_c0_seq1 489 479 .
ChrX	stalkie_big_nohaplotig	exon	25911810	25911811	100	-	.	Parent=comp115861_c0_seq1.mrna1;Target=comp115861_c0_seq1 478 477 .
ChrX	stalkie_big_nohaplotig	exon	25918512	25918513	100	-	.	Parent=comp115861_c0_seq1.mrna1;Target=comp115861_c0_seq1 476 475 .
ChrX	stalkie_big_nohaplotig	exon	25924528	25924529	100	-	.	Parent=comp115861_c0_seq1.mrna1;Target=comp115861_c0_seq1 474 473 .
ChrX	stalkie_big_nohaplotig	exon	25925051	25925060	80	-	.	Parent=comp115861_c0_seq1.mrna1;Target=comp115861_c0_seq1 472 463 .
ChrX	stalkie_big_nohaplotig	exon	25925856	25925869	71	-	.	Parent=comp115861_c0_seq1.mrna1;Target=comp115861_c0_seq1 462 449 .
ChrX	stalkie_big_nohaplotig	exon	25926891	25926893	100	-	.	Parent=comp115861_c0_seq1.mrna1;Target=comp115861_c0_seq1 448 446 .
ChrX	stalkie_big_nohaplotig	exon	25932489	25932496	100	-	.	Parent=comp115861_c0_seq1.mrna1;Target=comp115861_c0_seq1 445 438 .
ChrX	stalkie_big_nohaplotig	exon	25935432	25935435	100	-	.	Parent=comp115861_c0_seq1.mrna1;Target=comp115861_c0_seq1 437 434 .
ChrX	stalkie_big_nohaplotig	exon	25958273	25958278	100	-	.	Parent=comp115861_c0_seq1.mrna1;Target=comp115861_c0_seq1 433 428 .
ChrX	stalkie_big_nohaplotig	exon	25976482	25976484	100	-	.	Parent=comp115861_c0_seq1.mrna1;Target=comp115861_c0_seq1 427 425 .
ChrX	stalkie_big_nohaplotig	exon	25980506	25980510	100	-	.	Parent=comp115861_c0_seq1.mrna1;Target=comp115861_c0_seq1 424 420 .
ChrX	stalkie_big_nohaplotig	exon	27781562	27781980	99	-	.	Parent=comp115861_c0_seq1.mrna1;Target=comp115861_c0_seq1 419 1 .
ChrX	stalkie_big_nohaplotig	CDS	27781867	27781980	.	-	0	Parent=comp115861_c0_seq1.mrna1
ChrX	gffcl	locus	25917203	25917842	.	+	.	ID=RLOC_00001527;geneIDs=comp154911_c0_seq1.path1;transcripts=comp154911_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25917203	25917842	.	+	.	ID=comp154911_c0_seq1.mrna1;geneID=comp154911_c0_seq1.path1;Name=comp154911_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=640;mismatches=0;indels=0;unknowns=0;Target=comp154911_c0_seq1 640 1 .;CDS_Target=comp154911_c0_seq1 141 76 .;locus=RLOC_00001527
ChrX	stalkie_big_nohaplotig	exon	25917203	25917842	100	+	.	Parent=comp154911_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25917278	25917343	.	+	0	Parent=comp154911_c0_seq1.mrna1
ChrX	gffcl	locus	25918908	25919268	.	-	.	ID=RLOC_00001528;geneIDs=comp159575_c0_seq1.path2;transcripts=comp159575_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	25918908	25919268	.	-	.	ID=comp159575_c0_seq1.mrna2;geneID=comp159575_c0_seq1.path2;Name=comp159575_c0_seq1;Dir=indeterminatecoverage=39.8;identity=99.7;matches=360;mismatches=1;indels=0;unknowns=0;Target=comp159575_c0_seq1 905 545 .;CDS_Target=comp159575_c0_seq1 613 545 .;locus=RLOC_00001528
ChrX	stalkie_big_nohaplotig	exon	25918908	25919268	99	-	.	Parent=comp159575_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	25919200	25919268	.	-	0	Parent=comp159575_c0_seq1.mrna2
ChrX	gffcl	locus	25921258	25921825	.	-	.	ID=RLOC_00001529;geneIDs=comp151756_c0_seq1.path1;transcripts=comp151756_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25921258	25921825	.	-	.	ID=comp151756_c0_seq1.mrna1;geneID=comp151756_c0_seq1.path1;Name=comp151756_c0_seq1;Dir=sensecoverage=99.8;identity=99.2;matches=507;mismatches=2;indels=2;unknowns=0;Target=comp151756_c0_seq1 148 456 +;locus=RLOC_00001529
ChrX	stalkie_big_nohaplotig	exon	25921258	25921649	99	-	.	Parent=comp151756_c0_seq1.mrna1;Target=comp151756_c0_seq1 120 511 +
ChrX	stalkie_big_nohaplotig	exon	25921709	25921825	97	-	.	Parent=comp151756_c0_seq1.mrna1;Target=comp151756_c0_seq1 1 119 +
ChrX	stalkie_big_nohaplotig	CDS	25921313	25921621	.	-	0	Parent=comp151756_c0_seq1.mrna1
ChrX	gffcl	locus	25922508	25923075	.	+	.	ID=RLOC_00001530;geneIDs=comp151756_c0_seq1.path2;transcripts=comp151756_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	25922508	25923075	.	+	.	ID=comp151756_c0_seq1.mrna2;geneID=comp151756_c0_seq1.path2;Name=comp151756_c0_seq1;Dir=sensecoverage=99.8;identity=99.0;matches=506;mismatches=3;indels=2;unknowns=0;Target=comp151756_c0_seq1 148 456 +;locus=RLOC_00001530
ChrX	stalkie_big_nohaplotig	exon	25922508	25922624	95	+	.	Parent=comp151756_c0_seq1.mrna2;Target=comp151756_c0_seq1 1 119 +
ChrX	stalkie_big_nohaplotig	exon	25922684	25923075	100	+	.	Parent=comp151756_c0_seq1.mrna2;Target=comp151756_c0_seq1 120 511 +
ChrX	stalkie_big_nohaplotig	CDS	25922712	25923020	.	+	0	Parent=comp151756_c0_seq1.mrna2
ChrX	gffcl	locus	25949120	25949731	.	-	.	ID=RLOC_00001531;geneIDs=FBgn0005648.1.path1;transcripts=FBgn0005648.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25949120	25949731	.	-	.	ID=FBgn0005648.1.mrna1;geneID=FBgn0005648.1.path1;Name=FBgn0005648.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=610;mismatches=2;indels=0;unknowns=0;Target=FBgn0005648.1 612 1 .;locus=RLOC_00001531
ChrX	stalkie_big_nohaplotig	exon	25949120	25949731	99	-	.	Parent=FBgn0005648.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25949120	25949731	.	-	0	Parent=FBgn0005648.1.mrna1
ChrX	gffcl	locus	25953931	25954788	.	-	.	ID=RLOC_00001532;geneIDs=FBgn0005664.path1;transcripts=FBgn0005664.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25953931	25954788	.	-	.	ID=FBgn0005664.mrna1;geneID=FBgn0005664.path1;Name=FBgn0005664;Dir=sensecoverage=99.1;identity=100.0;matches=636;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001532
ChrX	stalkie_big_nohaplotig	exon	25953931	25954356	100	-	.	Parent=FBgn0005664.mrna1;Target=FBgn0005664 211 636 +
ChrX	stalkie_big_nohaplotig	exon	25954579	25954788	100	-	.	Parent=FBgn0005664.mrna1;Target=FBgn0005664 1 210 +
ChrX	stalkie_big_nohaplotig	CDS	25953931	25954356	.	-	0	Parent=FBgn0005664.mrna1;Target=FBgn0005664 211 636 +
ChrX	stalkie_big_nohaplotig	CDS	25954579	25954788	.	-	0	Parent=FBgn0005664.mrna1;Target=FBgn0005664 1 210 +
ChrX	gffcl	locus	25964959	25965690	.	+	.	ID=RLOC_00001533;geneIDs=comp58660_c0_seq1.path1;transcripts=comp58660_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25964959	25965690	.	+	.	ID=comp58660_c0_seq1.mrna1;geneID=comp58660_c0_seq1.path1;Name=comp58660_c0_seq1;Dir=indeterminatecoverage=96.6;identity=99.7;matches=730;mismatches=2;indels=0;unknowns=0;Target=comp58660_c0_seq1 738 7 .;CDS_Target=comp58660_c0_seq1 515 93 .;locus=RLOC_00001533
ChrX	stalkie_big_nohaplotig	exon	25964959	25965690	99	+	.	Parent=comp58660_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	25965045	25965467	.	+	0	Parent=comp58660_c0_seq1.mrna1
ChrX	gffcl	locus	25974066	25974592	.	+	.	ID=RLOC_00001534;geneIDs=comp59324_c0_seq1.path1;transcripts=comp59324_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	25974066	25974592	.	+	.	ID=comp59324_c0_seq1.mrna1;geneID=comp59324_c0_seq1.path1;Name=comp59324_c0_seq1;Dir=antisensecoverage=98.1;identity=99.3;matches=457;mismatches=2;indels=1;unknowns=0;locus=RLOC_00001534
ChrX	stalkie_big_nohaplotig	exon	25974066	25974082	100	+	.	Parent=comp59324_c0_seq1.mrna1;Target=comp59324_c0_seq1 452 468 -
ChrX	stalkie_big_nohaplotig	exon	25974150	25974592	99	+	.	Parent=comp59324_c0_seq1.mrna1;Target=comp59324_c0_seq1 10 451 -
ChrX	stalkie_big_nohaplotig	CDS	25974068	25974082	.	+	0	Parent=comp59324_c0_seq1.mrna1;Target=comp59324_c0_seq1 452 466 .
ChrX	stalkie_big_nohaplotig	CDS	25974150	25974311	.	+	0	Parent=comp59324_c0_seq1.mrna1;Target=comp59324_c0_seq1 290 451 .
ChrX	gffcl	locus	26065874	26264046	.	+	.	ID=RLOC_00001535;geneIDs=comp155256_c0_seq1.path1;transcripts=comp155256_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26065874	26264046	.	+	.	ID=comp155256_c0_seq1.mrna1;geneID=comp155256_c0_seq1.path1;Name=comp155256_c0_seq1;Dir=indeterminatecoverage=92.3;identity=78.4;matches=502;mismatches=32;indels=106;unknowns=0;locus=RLOC_00001535
ChrX	stalkie_big_nohaplotig	exon	26065874	26065878	100	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 66 62 .
ChrX	stalkie_big_nohaplotig	exon	26073023	26073025	100	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 69 67 .
ChrX	stalkie_big_nohaplotig	exon	26074476	26074480	100	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 74 70 .
ChrX	stalkie_big_nohaplotig	exon	26076068	26076075	100	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 82 75 .
ChrX	stalkie_big_nohaplotig	exon	26078120	26078131	83	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 94 83 .
ChrX	stalkie_big_nohaplotig	exon	26084895	26084901	85	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 101 95 .
ChrX	stalkie_big_nohaplotig	exon	26090883	26090890	100	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 116 109 .
ChrX	stalkie_big_nohaplotig	exon	26099499	26099524	53	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 166 118 .
ChrX	stalkie_big_nohaplotig	exon	26104139	26104148	90	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 176 167 .
ChrX	stalkie_big_nohaplotig	exon	26105327	26105331	100	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 181 177 .
ChrX	stalkie_big_nohaplotig	exon	26108188	26108189	100	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 183 182 .
ChrX	stalkie_big_nohaplotig	exon	26116227	26116232	100	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 189 184 .
ChrX	stalkie_big_nohaplotig	exon	26121523	26121530	75	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 197 190 .
ChrX	stalkie_big_nohaplotig	exon	26130551	26130578	34	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 269 198 .
ChrX	stalkie_big_nohaplotig	exon	26153436	26153438	100	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 272 270 .
ChrX	stalkie_big_nohaplotig	exon	26161384	26161389	100	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 278 273 .
ChrX	stalkie_big_nohaplotig	exon	26172710	26172748	48	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 321 279 .
ChrX	stalkie_big_nohaplotig	exon	26195567	26195570	100	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 325 322 .
ChrX	stalkie_big_nohaplotig	exon	26207221	26207229	100	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 346 338 .
ChrX	stalkie_big_nohaplotig	exon	26226389	26226401	29	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 464 421 .
ChrX	stalkie_big_nohaplotig	exon	26229387	26229391	100	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 469 465 .
ChrX	stalkie_big_nohaplotig	exon	26248463	26248471	100	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 478 470 .
ChrX	stalkie_big_nohaplotig	exon	26249710	26249712	100	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 482 480 .
ChrX	stalkie_big_nohaplotig	exon	26260909	26260912	100	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 486 483 .
ChrX	stalkie_big_nohaplotig	exon	26261459	26261465	100	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 493 487 .
ChrX	stalkie_big_nohaplotig	exon	26261546	26261558	76	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 506 494 .
ChrX	stalkie_big_nohaplotig	exon	26263762	26264046	98	+	.	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 791 507 .
ChrX	stalkie_big_nohaplotig	CDS	26065876	26065878	.	+	0	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 66 64 .
ChrX	stalkie_big_nohaplotig	CDS	26073023	26073025	.	+	0	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 69 67 .
ChrX	stalkie_big_nohaplotig	CDS	26074476	26074480	.	+	0	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 74 70 .
ChrX	stalkie_big_nohaplotig	CDS	26076068	26076075	.	+	1	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 82 75 .
ChrX	stalkie_big_nohaplotig	CDS	26078120	26078131	.	+	2	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 94 83 .
ChrX	stalkie_big_nohaplotig	CDS	26084895	26084901	.	+	2	Parent=comp155256_c0_seq1.mrna1;Target=comp155256_c0_seq1 101 95 .
ChrX	gffcl	locus	26127110	26128417	.	-	.	ID=RLOC_00001536;geneIDs=comp158241_c0_seq1.path1;transcripts=comp158241_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26127110	26128417	.	-	.	ID=comp158241_c0_seq1.mrna1;geneID=comp158241_c0_seq1.path1;Name=comp158241_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=751;mismatches=3;indels=0;unknowns=0;Target=comp158241_c0_seq1 188 679 +;locus=RLOC_00001536
ChrX	stalkie_big_nohaplotig	exon	26127110	26127146	100	-	.	Parent=comp158241_c0_seq1.mrna1;Target=comp158241_c0_seq1 718 754 +
ChrX	stalkie_big_nohaplotig	exon	26127208	26127751	99	-	.	Parent=comp158241_c0_seq1.mrna1;Target=comp158241_c0_seq1 174 717 +
ChrX	stalkie_big_nohaplotig	exon	26128245	26128417	98	-	.	Parent=comp158241_c0_seq1.mrna1;Target=comp158241_c0_seq1 1 173 +
ChrX	stalkie_big_nohaplotig	CDS	26127246	26127737	.	-	0	Parent=comp158241_c0_seq1.mrna1
ChrX	gffcl	locus	26134541	26135476	.	-	.	ID=RLOC_00001537;geneIDs=comp145869_c0_seq1.path1;transcripts=comp145869_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26134541	26135476	.	-	.	ID=comp145869_c0_seq1.mrna1;geneID=comp145869_c0_seq1.path1;Name=comp145869_c0_seq1;Dir=antisensecoverage=99.9;identity=100.0;matches=867;mismatches=0;indels=0;unknowns=0;Target=comp145869_c0_seq1 243 734 .;locus=RLOC_00001537
ChrX	stalkie_big_nohaplotig	exon	26134541	26134776	100	-	.	Parent=comp145869_c0_seq1.mrna1;Target=comp145869_c0_seq1 2 237 -
ChrX	stalkie_big_nohaplotig	exon	26134846	26135476	100	-	.	Parent=comp145869_c0_seq1.mrna1;Target=comp145869_c0_seq1 238 868 -
ChrX	stalkie_big_nohaplotig	CDS	26134851	26135342	.	-	0	Parent=comp145869_c0_seq1.mrna1
ChrX	gffcl	locus	26142668	26144874	.	+	.	ID=RLOC_00001538;geneIDs=FBgn0034463.1.path1;transcripts=FBgn0034463.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26142668	26144874	.	+	.	ID=FBgn0034463.1.mrna1;geneID=FBgn0034463.1.path1;Name=FBgn0034463.1;Dir=sensecoverage=100.0;identity=99.7;matches=906;mismatches=2;indels=1;unknowns=0;locus=RLOC_00001538
ChrX	stalkie_big_nohaplotig	exon	26142668	26142757	98	+	.	Parent=FBgn0034463.1.mrna1;Target=FBgn0034463.1 1 91 +
ChrX	stalkie_big_nohaplotig	exon	26143907	26144088	100	+	.	Parent=FBgn0034463.1.mrna1;Target=FBgn0034463.1 92 273 +
ChrX	stalkie_big_nohaplotig	exon	26144183	26144379	100	+	.	Parent=FBgn0034463.1.mrna1;Target=FBgn0034463.1 274 470 +
ChrX	stalkie_big_nohaplotig	exon	26144436	26144874	99	+	.	Parent=FBgn0034463.1.mrna1;Target=FBgn0034463.1 471 909 +
ChrX	stalkie_big_nohaplotig	CDS	26142739	26142757	.	+	0	Parent=FBgn0034463.1.mrna1;Target=FBgn0034463.1 73 91 +
ChrX	stalkie_big_nohaplotig	CDS	26143907	26144088	.	+	2	Parent=FBgn0034463.1.mrna1;Target=FBgn0034463.1 92 273 +
ChrX	stalkie_big_nohaplotig	CDS	26144183	26144379	.	+	0	Parent=FBgn0034463.1.mrna1;Target=FBgn0034463.1 274 470 +
ChrX	stalkie_big_nohaplotig	CDS	26144436	26144874	.	+	1	Parent=FBgn0034463.1.mrna1;Target=FBgn0034463.1 471 909 +
ChrX	gffcl	locus	26147461	26155648	.	+	.	ID=RLOC_00001539;geneIDs=FBgn0032387.1.path1;transcripts=FBgn0032387.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26147461	26155648	.	+	.	ID=FBgn0032387.1.mrna1;geneID=FBgn0032387.1.path1;Name=FBgn0032387.1;Dir=sensecoverage=100.0;identity=100.0;matches=2022;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001539
ChrX	stalkie_big_nohaplotig	exon	26147461	26147549	100	+	.	Parent=FBgn0032387.1.mrna1;Target=FBgn0032387.1 1 89 +
ChrX	stalkie_big_nohaplotig	exon	26147636	26148030	100	+	.	Parent=FBgn0032387.1.mrna1;Target=FBgn0032387.1 90 484 +
ChrX	stalkie_big_nohaplotig	exon	26148258	26148563	100	+	.	Parent=FBgn0032387.1.mrna1;Target=FBgn0032387.1 485 790 +
ChrX	stalkie_big_nohaplotig	exon	26148634	26148734	100	+	.	Parent=FBgn0032387.1.mrna1;Target=FBgn0032387.1 791 891 +
ChrX	stalkie_big_nohaplotig	exon	26150609	26150892	100	+	.	Parent=FBgn0032387.1.mrna1;Target=FBgn0032387.1 892 1175 +
ChrX	stalkie_big_nohaplotig	exon	26151044	26151282	100	+	.	Parent=FBgn0032387.1.mrna1;Target=FBgn0032387.1 1176 1414 +
ChrX	stalkie_big_nohaplotig	exon	26151401	26151488	100	+	.	Parent=FBgn0032387.1.mrna1;Target=FBgn0032387.1 1415 1502 +
ChrX	stalkie_big_nohaplotig	exon	26154586	26154777	100	+	.	Parent=FBgn0032387.1.mrna1;Target=FBgn0032387.1 1503 1694 +
ChrX	stalkie_big_nohaplotig	exon	26155157	26155325	100	+	.	Parent=FBgn0032387.1.mrna1;Target=FBgn0032387.1 1695 1863 +
ChrX	stalkie_big_nohaplotig	exon	26155490	26155648	100	+	.	Parent=FBgn0032387.1.mrna1;Target=FBgn0032387.1 1864 2022 +
ChrX	stalkie_big_nohaplotig	CDS	26147461	26147549	.	+	0	Parent=FBgn0032387.1.mrna1;Target=FBgn0032387.1 1 89 +
ChrX	stalkie_big_nohaplotig	CDS	26147636	26148030	.	+	1	Parent=FBgn0032387.1.mrna1;Target=FBgn0032387.1 90 484 +
ChrX	stalkie_big_nohaplotig	CDS	26148258	26148563	.	+	2	Parent=FBgn0032387.1.mrna1;Target=FBgn0032387.1 485 790 +
ChrX	stalkie_big_nohaplotig	CDS	26148634	26148734	.	+	2	Parent=FBgn0032387.1.mrna1;Target=FBgn0032387.1 791 891 +
ChrX	stalkie_big_nohaplotig	CDS	26150609	26150892	.	+	0	Parent=FBgn0032387.1.mrna1;Target=FBgn0032387.1 892 1175 +
ChrX	stalkie_big_nohaplotig	CDS	26151044	26151282	.	+	1	Parent=FBgn0032387.1.mrna1;Target=FBgn0032387.1 1176 1414 +
ChrX	stalkie_big_nohaplotig	CDS	26151401	26151488	.	+	2	Parent=FBgn0032387.1.mrna1;Target=FBgn0032387.1 1415 1502 +
ChrX	stalkie_big_nohaplotig	CDS	26154586	26154777	.	+	1	Parent=FBgn0032387.1.mrna1;Target=FBgn0032387.1 1503 1694 +
ChrX	stalkie_big_nohaplotig	CDS	26155157	26155325	.	+	1	Parent=FBgn0032387.1.mrna1;Target=FBgn0032387.1 1695 1863 +
ChrX	stalkie_big_nohaplotig	CDS	26155490	26155648	.	+	0	Parent=FBgn0032387.1.mrna1;Target=FBgn0032387.1 1864 2022 +
ChrX	gffcl	locus	26160832	26166023	.	-	.	ID=RLOC_00001540;geneIDs=FBgn0032388.1.path1;transcripts=FBgn0032388.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26160832	26166023	.	-	.	ID=FBgn0032388.1.mrna1;geneID=FBgn0032388.1.path1;Name=FBgn0032388.1;Dir=sensecoverage=99.7;identity=100.0;matches=2699;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001540
ChrX	stalkie_big_nohaplotig	exon	26160832	26160990	100	-	.	Parent=FBgn0032388.1.mrna1;Target=FBgn0032388.1 2548 2706 +
ChrX	stalkie_big_nohaplotig	exon	26161073	26161298	100	-	.	Parent=FBgn0032388.1.mrna1;Target=FBgn0032388.1 2322 2547 +
ChrX	stalkie_big_nohaplotig	exon	26161605	26162372	100	-	.	Parent=FBgn0032388.1.mrna1;Target=FBgn0032388.1 1554 2321 +
ChrX	stalkie_big_nohaplotig	exon	26163174	26163268	100	-	.	Parent=FBgn0032388.1.mrna1;Target=FBgn0032388.1 1459 1553 +
ChrX	stalkie_big_nohaplotig	exon	26163355	26163807	100	-	.	Parent=FBgn0032388.1.mrna1;Target=FBgn0032388.1 1006 1458 +
ChrX	stalkie_big_nohaplotig	exon	26165026	26166023	100	-	.	Parent=FBgn0032388.1.mrna1;Target=FBgn0032388.1 8 1005 +
ChrX	stalkie_big_nohaplotig	CDS	26160832	26160990	.	-	0	Parent=FBgn0032388.1.mrna1;Target=FBgn0032388.1 2548 2706 +
ChrX	stalkie_big_nohaplotig	CDS	26161073	26161298	.	-	1	Parent=FBgn0032388.1.mrna1;Target=FBgn0032388.1 2322 2547 +
ChrX	stalkie_big_nohaplotig	CDS	26161605	26162372	.	-	1	Parent=FBgn0032388.1.mrna1;Target=FBgn0032388.1 1554 2321 +
ChrX	stalkie_big_nohaplotig	CDS	26163174	26163268	.	-	0	Parent=FBgn0032388.1.mrna1;Target=FBgn0032388.1 1459 1553 +
ChrX	stalkie_big_nohaplotig	CDS	26163355	26163807	.	-	0	Parent=FBgn0032388.1.mrna1;Target=FBgn0032388.1 1006 1458 +
ChrX	stalkie_big_nohaplotig	CDS	26165026	26166021	.	-	0	Parent=FBgn0032388.1.mrna1;Target=FBgn0032388.1 10 1005 +
ChrX	gffcl	locus	26169889	26170558	.	-	.	ID=RLOC_00001541;geneIDs=comp182114_c0_seq1.path1;transcripts=comp182114_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26169889	26170558	.	-	.	ID=comp182114_c0_seq1.mrna1;geneID=comp182114_c0_seq1.path1;Name=comp182114_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=593;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001541
ChrX	stalkie_big_nohaplotig	exon	26169889	26170353	100	-	.	Parent=comp182114_c0_seq1.mrna1;Target=comp182114_c0_seq1 129 593 +
ChrX	stalkie_big_nohaplotig	exon	26170431	26170558	100	-	.	Parent=comp182114_c0_seq1.mrna1;Target=comp182114_c0_seq1 1 128 +
ChrX	stalkie_big_nohaplotig	CDS	26170090	26170353	.	-	0	Parent=comp182114_c0_seq1.mrna1;Target=comp182114_c0_seq1 129 392 +
ChrX	stalkie_big_nohaplotig	CDS	26170431	26170445	.	-	0	Parent=comp182114_c0_seq1.mrna1;Target=comp182114_c0_seq1 114 128 +
ChrX	gffcl	locus	26170668	26171577	.	+	.	ID=RLOC_00001542;geneIDs=ORF2505.path2;transcripts=ORF2505.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	26170668	26171577	.	+	.	ID=ORF2505.mrna2;geneID=ORF2505.path2;Name=ORF2505;Dir=sensecoverage=100.0;identity=99.5;matches=845;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001542
ChrX	stalkie_big_nohaplotig	exon	26170668	26170959	99	+	.	Parent=ORF2505.mrna2;Target=ORF2505 1 292 +
ChrX	stalkie_big_nohaplotig	exon	26171021	26171577	99	+	.	Parent=ORF2505.mrna2;Target=ORF2505 293 849 +
ChrX	stalkie_big_nohaplotig	CDS	26170668	26170959	.	+	0	Parent=ORF2505.mrna2;Target=ORF2505 1 292 +
ChrX	stalkie_big_nohaplotig	CDS	26171021	26171577	.	+	2	Parent=ORF2505.mrna2;Target=ORF2505 293 849 +
ChrX	gffcl	locus	26176742	26177402	.	+	.	ID=RLOC_00001543;geneIDs=comp151655_c0_seq1.path1;transcripts=comp151655_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26176742	26177402	.	+	.	ID=comp151655_c0_seq1.mrna1;geneID=comp151655_c0_seq1.path1;Name=comp151655_c0_seq1;Dir=antisensecoverage=93.0;identity=99.8;matches=516;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001543
ChrX	stalkie_big_nohaplotig	exon	26176742	26176797	100	+	.	Parent=comp151655_c0_seq1.mrna1;Target=comp151655_c0_seq1 462 517 -
ChrX	stalkie_big_nohaplotig	exon	26176866	26177202	99	+	.	Parent=comp151655_c0_seq1.mrna1;Target=comp151655_c0_seq1 125 461 -
ChrX	stalkie_big_nohaplotig	exon	26177279	26177402	100	+	.	Parent=comp151655_c0_seq1.mrna1;Target=comp151655_c0_seq1 1 124 -
ChrX	stalkie_big_nohaplotig	CDS	26176961	26177202	.	+	0	Parent=comp151655_c0_seq1.mrna1;Target=comp151655_c0_seq1 125 366 .
ChrX	stalkie_big_nohaplotig	CDS	26177279	26177402	.	+	1	Parent=comp151655_c0_seq1.mrna1;Target=comp151655_c0_seq1 1 124 .
ChrX	gffcl	locus	26184029	26184689	.	-	.	ID=RLOC_00001544;geneIDs=comp151655_c0_seq1.path2;transcripts=comp151655_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	26184029	26184689	.	-	.	ID=comp151655_c0_seq1.mrna2;geneID=comp151655_c0_seq1.path2;Name=comp151655_c0_seq1;Dir=antisensecoverage=93.0;identity=99.4;matches=514;mismatches=3;indels=0;unknowns=0;locus=RLOC_00001544
ChrX	stalkie_big_nohaplotig	exon	26184029	26184152	99	-	.	Parent=comp151655_c0_seq1.mrna2;Target=comp151655_c0_seq1 1 124 -
ChrX	stalkie_big_nohaplotig	exon	26184229	26184565	99	-	.	Parent=comp151655_c0_seq1.mrna2;Target=comp151655_c0_seq1 125 461 -
ChrX	stalkie_big_nohaplotig	exon	26184634	26184689	100	-	.	Parent=comp151655_c0_seq1.mrna2;Target=comp151655_c0_seq1 462 517 -
ChrX	stalkie_big_nohaplotig	CDS	26184029	26184152	.	-	1	Parent=comp151655_c0_seq1.mrna2;Target=comp151655_c0_seq1 1 124 .
ChrX	stalkie_big_nohaplotig	CDS	26184229	26184470	.	-	0	Parent=comp151655_c0_seq1.mrna2;Target=comp151655_c0_seq1 125 366 .
ChrX	gffcl	locus	26188117	26189024	.	-	.	ID=RLOC_00001545;geneIDs=ORF2505.path1;transcripts=ORF2505.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26188117	26189024	.	-	.	ID=ORF2505.mrna1;geneID=ORF2505.path1;Name=ORF2505;Dir=sensecoverage=100.0;identity=99.8;matches=847;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001545
ChrX	stalkie_big_nohaplotig	exon	26188117	26188673	99	-	.	Parent=ORF2505.mrna1;Target=ORF2505 293 849 +
ChrX	stalkie_big_nohaplotig	exon	26188733	26189024	99	-	.	Parent=ORF2505.mrna1;Target=ORF2505 1 292 +
ChrX	stalkie_big_nohaplotig	CDS	26188117	26188673	.	-	2	Parent=ORF2505.mrna1;Target=ORF2505 293 849 +
ChrX	stalkie_big_nohaplotig	CDS	26188733	26189024	.	-	0	Parent=ORF2505.mrna1;Target=ORF2505 1 292 +
ChrX	gffcl	locus	26190697	26192251	.	+	.	ID=RLOC_00001546;geneIDs=FBgn0032391.2.path1;transcripts=FBgn0032391.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26190697	26192251	.	+	.	ID=FBgn0032391.2.mrna1;geneID=FBgn0032391.2.path1;Name=FBgn0032391.2;Dir=sensecoverage=100.0;identity=99.4;matches=1406;mismatches=7;indels=1;unknowns=0;locus=RLOC_00001546
ChrX	stalkie_big_nohaplotig	exon	26190697	26191038	98	+	.	Parent=FBgn0032391.2.mrna1;Target=FBgn0032391.2 1 341 +
ChrX	stalkie_big_nohaplotig	exon	26191115	26191289	99	+	.	Parent=FBgn0032391.2.mrna1;Target=FBgn0032391.2 342 516 +
ChrX	stalkie_big_nohaplotig	exon	26191355	26192251	99	+	.	Parent=FBgn0032391.2.mrna1;Target=FBgn0032391.2 517 1413 +
ChrX	stalkie_big_nohaplotig	CDS	26190791	26191038	.	+	0	Parent=FBgn0032391.2.mrna1;Target=FBgn0032391.2 94 341 +
ChrX	stalkie_big_nohaplotig	CDS	26191115	26191289	.	+	1	Parent=FBgn0032391.2.mrna1;Target=FBgn0032391.2 342 516 +
ChrX	stalkie_big_nohaplotig	CDS	26191355	26192251	.	+	0	Parent=FBgn0032391.2.mrna1;Target=FBgn0032391.2 517 1413 +
ChrX	gffcl	locus	26192443	26769256	.	+	.	ID=RLOC_00001547;geneIDs=comp69553_c0_seq1.path1;transcripts=comp69553_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26192443	26769256	.	+	.	ID=comp69553_c0_seq1.mrna1;geneID=comp69553_c0_seq1.path1;Name=comp69553_c0_seq1;Dir=indeterminatecoverage=85.1;identity=98.2;matches=274;mismatches=5;indels=0;unknowns=0;Target=comp69553_c0_seq1 138 10 .;locus=RLOC_00001547
ChrX	stalkie_big_nohaplotig	exon	26192443	26192678	98	+	.	Parent=comp69553_c0_seq1.mrna1;Target=comp69553_c0_seq1 244 9 .
ChrX	stalkie_big_nohaplotig	exon	26732768	26732770	100	+	.	Parent=comp69553_c0_seq1.mrna1;Target=comp69553_c0_seq1 247 245 .
ChrX	stalkie_big_nohaplotig	exon	26733681	26733684	100	+	.	Parent=comp69553_c0_seq1.mrna1;Target=comp69553_c0_seq1 251 248 .
ChrX	stalkie_big_nohaplotig	exon	26746971	26746974	100	+	.	Parent=comp69553_c0_seq1.mrna1;Target=comp69553_c0_seq1 255 252 .
ChrX	stalkie_big_nohaplotig	exon	26752863	26752867	100	+	.	Parent=comp69553_c0_seq1.mrna1;Target=comp69553_c0_seq1 260 256 .
ChrX	stalkie_big_nohaplotig	exon	26767069	26767072	100	+	.	Parent=comp69553_c0_seq1.mrna1;Target=comp69553_c0_seq1 264 261 .
ChrX	stalkie_big_nohaplotig	exon	26767527	26767531	100	+	.	Parent=comp69553_c0_seq1.mrna1;Target=comp69553_c0_seq1 269 265 .
ChrX	stalkie_big_nohaplotig	exon	26768597	26768600	100	+	.	Parent=comp69553_c0_seq1.mrna1;Target=comp69553_c0_seq1 273 270 .
ChrX	stalkie_big_nohaplotig	exon	26769115	26769122	75	+	.	Parent=comp69553_c0_seq1.mrna1;Target=comp69553_c0_seq1 281 274 .
ChrX	stalkie_big_nohaplotig	exon	26769251	26769256	100	+	.	Parent=comp69553_c0_seq1.mrna1;Target=comp69553_c0_seq1 287 282 .
ChrX	stalkie_big_nohaplotig	CDS	26192444	26192572	.	+	0	Parent=comp69553_c0_seq1.mrna1
ChrX	gffcl	locus	26200952	26201319	.	-	.	ID=RLOC_00001548;geneIDs=comp143899_c0_seq1.path1;transcripts=comp143899_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26200952	26201319	.	-	.	ID=comp143899_c0_seq1.mrna1;geneID=comp143899_c0_seq1.path1;Name=comp143899_c0_seq1;Dir=indeterminatecoverage=93.4;identity=99.2;matches=367;mismatches=1;indels=2;unknowns=0;Target=comp143899_c0_seq1 396 27 .;CDS_Target=comp143899_c0_seq1 361 287 .;locus=RLOC_00001548
ChrX	stalkie_big_nohaplotig	exon	26200952	26201319	99	-	.	Parent=comp143899_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	26200987	26201061	.	-	0	Parent=comp143899_c0_seq1.mrna1
ChrX	gffcl	locus	26224350	26224689	.	-	.	ID=RLOC_00001549;geneIDs=comp119291_c0_seq1.path1;transcripts=comp119291_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26224350	26224689	.	-	.	ID=comp119291_c0_seq1.mrna1;geneID=comp119291_c0_seq1.path1;Name=comp119291_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=340;mismatches=0;indels=0;unknowns=0;Target=comp119291_c0_seq1 340 1 .;CDS_Target=comp119291_c0_seq1 131 27 .;locus=RLOC_00001549
ChrX	stalkie_big_nohaplotig	exon	26224350	26224689	100	-	.	Parent=comp119291_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	26224559	26224663	.	-	0	Parent=comp119291_c0_seq1.mrna1
ChrX	gffcl	locus	26226865	26227149	.	+	.	ID=RLOC_00001550;geneIDs=comp135603_c0_seq1.path1;transcripts=comp135603_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26226865	26227149	.	+	.	ID=comp135603_c0_seq1.mrna1;geneID=comp135603_c0_seq1.path1;Name=comp135603_c0_seq1;Dir=indeterminatecoverage=83.8;identity=98.6;matches=281;mismatches=4;indels=0;unknowns=0;Target=comp135603_c0_seq1 297 13 .;CDS_Target=comp135603_c0_seq1 132 13 .;locus=RLOC_00001550
ChrX	stalkie_big_nohaplotig	exon	26226865	26227149	98	+	.	Parent=comp135603_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	26226865	26226984	.	+	0	Parent=comp135603_c0_seq1.mrna1
ChrX	gffcl	locus	26230611	26340488	.	+	.	ID=RLOC_00001551;geneIDs=FBgn0011648.1.path1,comp162998_c2_seq1.path1;transcripts=comp162998_c2_seq1.mrna1,FBgn0011648.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26230611	26340488	.	+	.	ID=comp162998_c2_seq1.mrna1;geneID=comp162998_c2_seq1.path1;Name=comp162998_c2_seq1;Dir=antisensecoverage=73.0;identity=97.6;matches=1666;mismatches=19;indels=22;unknowns=0;locus=RLOC_00001551
ChrX	stalkie_big_nohaplotig	exon	26230611	26230861	99	+	.	Parent=comp162998_c2_seq1.mrna1;Target=comp162998_c2_seq1 2088 2338 -
ChrX	stalkie_big_nohaplotig	exon	26238403	26238405	100	+	.	Parent=comp162998_c2_seq1.mrna1;Target=comp162998_c2_seq1 2085 2087 -
ChrX	stalkie_big_nohaplotig	exon	26240174	26240175	100	+	.	Parent=comp162998_c2_seq1.mrna1;Target=comp162998_c2_seq1 2083 2084 -
ChrX	stalkie_big_nohaplotig	exon	26246053	26246058	66	+	.	Parent=comp162998_c2_seq1.mrna1;Target=comp162998_c2_seq1 2077 2082 -
ChrX	stalkie_big_nohaplotig	exon	26251725	26252009	96	+	.	Parent=comp162998_c2_seq1.mrna1;Target=comp162998_c2_seq1 1792 2076 -
ChrX	stalkie_big_nohaplotig	exon	26252086	26252782	99	+	.	Parent=comp162998_c2_seq1.mrna1;Target=comp162998_c2_seq1 1095 1791 -
ChrX	stalkie_big_nohaplotig	exon	26252847	26253274	94	+	.	Parent=comp162998_c2_seq1.mrna1;Target=comp162998_c2_seq1 645 1094 -
ChrX	stalkie_big_nohaplotig	exon	26288040	26288041	100	+	.	Parent=comp162998_c2_seq1.mrna1;Target=comp162998_c2_seq1 643 644 -
ChrX	stalkie_big_nohaplotig	exon	26319844	26319848	100	+	.	Parent=comp162998_c2_seq1.mrna1;Target=comp162998_c2_seq1 638 642 -
ChrX	stalkie_big_nohaplotig	exon	26340483	26340488	100	+	.	Parent=comp162998_c2_seq1.mrna1;Target=comp162998_c2_seq1 632 637 -
ChrX	stalkie_big_nohaplotig	CDS	26251740	26252009	.	+	0	Parent=comp162998_c2_seq1.mrna1;Target=comp162998_c2_seq1 1792 2061 .
ChrX	stalkie_big_nohaplotig	CDS	26252086	26252782	.	+	0	Parent=comp162998_c2_seq1.mrna1;Target=comp162998_c2_seq1 1095 1791 .
ChrX	stalkie_big_nohaplotig	CDS	26252847	26253253	.	+	2	Parent=comp162998_c2_seq1.mrna1;Target=comp162998_c2_seq1 688 1094 .
ChrX	stalkie_big_nohaplotig	mRNA	26247847	26253250	.	+	.	ID=FBgn0011648.1.mrna1;geneID=FBgn0011648.1.path1;Name=FBgn0011648.1;Dir=sensecoverage=100.0;identity=98.5;matches=1411;mismatches=17;indels=5;unknowns=0;locus=RLOC_00001551
ChrX	stalkie_big_nohaplotig	exon	26247847	26247894	83	+	.	Parent=FBgn0011648.1.mrna1;Target=FBgn0011648.1 1 43 +
ChrX	stalkie_big_nohaplotig	exon	26251726	26252009	96	+	.	Parent=FBgn0011648.1.mrna1;Target=FBgn0011648.1 44 327 +
ChrX	stalkie_big_nohaplotig	exon	26252086	26252782	99	+	.	Parent=FBgn0011648.1.mrna1;Target=FBgn0011648.1 328 1024 +
ChrX	stalkie_big_nohaplotig	exon	26252847	26253250	100	+	.	Parent=FBgn0011648.1.mrna1;Target=FBgn0011648.1 1025 1428 +
ChrX	stalkie_big_nohaplotig	CDS	26247849	26247894	.	+	0	Parent=FBgn0011648.1.mrna1;Target=FBgn0011648.1 3 43 +
ChrX	stalkie_big_nohaplotig	CDS	26251726	26251735	.	+	2	Parent=FBgn0011648.1.mrna1;Target=FBgn0011648.1 44 53 +
ChrX	gffcl	locus	26234003	26234370	.	-	.	ID=RLOC_00001552;geneIDs=comp143899_c0_seq1.path2;transcripts=comp143899_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	26234003	26234370	.	-	.	ID=comp143899_c0_seq1.mrna2;geneID=comp143899_c0_seq1.path2;Name=comp143899_c0_seq1;Dir=indeterminatecoverage=93.4;identity=99.2;matches=367;mismatches=1;indels=2;unknowns=0;Target=comp143899_c0_seq1 396 27 .;CDS_Target=comp143899_c0_seq1 361 287 .;locus=RLOC_00001552
ChrX	stalkie_big_nohaplotig	exon	26234003	26234370	99	-	.	Parent=comp143899_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	26234038	26234112	.	-	0	Parent=comp143899_c0_seq1.mrna2
ChrX	gffcl	locus	26256560	26259631	.	+	.	ID=RLOC_00001553;geneIDs=FBgn0031505.1.path1;transcripts=FBgn0031505.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26256560	26259631	.	+	.	ID=FBgn0031505.1.mrna1;geneID=FBgn0031505.1.path1;Name=FBgn0031505.1;Dir=sensecoverage=100.0;identity=99.4;matches=358;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001553
ChrX	stalkie_big_nohaplotig	exon	26256560	26256728	98	+	.	Parent=FBgn0031505.1.mrna1;Target=FBgn0031505.1 1 169 +
ChrX	stalkie_big_nohaplotig	exon	26256841	26256984	100	+	.	Parent=FBgn0031505.1.mrna1;Target=FBgn0031505.1 170 313 +
ChrX	stalkie_big_nohaplotig	exon	26259585	26259631	100	+	.	Parent=FBgn0031505.1.mrna1;Target=FBgn0031505.1 314 360 +
ChrX	stalkie_big_nohaplotig	CDS	26256560	26256728	.	+	0	Parent=FBgn0031505.1.mrna1;Target=FBgn0031505.1 1 169 +
ChrX	stalkie_big_nohaplotig	CDS	26256841	26256984	.	+	2	Parent=FBgn0031505.1.mrna1;Target=FBgn0031505.1 170 313 +
ChrX	stalkie_big_nohaplotig	CDS	26259585	26259631	.	+	2	Parent=FBgn0031505.1.mrna1;Target=FBgn0031505.1 314 360 +
ChrX	gffcl	locus	26277469	26278002	.	-	.	ID=RLOC_00001554;geneIDs=comp116046_c0_seq1.path1;transcripts=comp116046_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26277469	26278002	.	-	.	ID=comp116046_c0_seq1.mrna1;geneID=comp116046_c0_seq1.path1;Name=comp116046_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=531;mismatches=3;indels=5;unknowns=0;Target=comp116046_c0_seq1 539 1 .;CDS_Target=comp116046_c0_seq1 209 3 .;locus=RLOC_00001554
ChrX	stalkie_big_nohaplotig	exon	26277469	26278002	98	-	.	Parent=comp116046_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	26277794	26278000	.	-	0	Parent=comp116046_c0_seq1.mrna1
ChrX	gffcl	locus	26292142	26293155	.	-	.	ID=RLOC_00001555;geneIDs=ORF1716.path1;transcripts=ORF1716.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26292142	26293155	.	-	.	ID=ORF1716.mrna1;geneID=ORF1716.path1;Name=ORF1716;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1011;mismatches=3;indels=0;unknowns=0;Target=ORF1716 1014 1 .;locus=RLOC_00001555
ChrX	stalkie_big_nohaplotig	exon	26292142	26293155	99	-	.	Parent=ORF1716.mrna1
ChrX	stalkie_big_nohaplotig	CDS	26292142	26293155	.	-	0	Parent=ORF1716.mrna1
ChrX	gffcl	locus	26319694	26321998	.	-	.	ID=RLOC_00001556;geneIDs=FBgn0031853.9.path1;transcripts=FBgn0031853.9.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26319694	26321998	.	-	.	ID=FBgn0031853.9.mrna1;geneID=FBgn0031853.9.path1;Name=FBgn0031853.9;Dir=sensecoverage=100.0;identity=99.7;matches=2126;mismatches=7;indels=0;unknowns=0;locus=RLOC_00001556
ChrX	stalkie_big_nohaplotig	exon	26319694	26319766	100	-	.	Parent=FBgn0031853.9.mrna1;Target=FBgn0031853.9 2061 2133 +
ChrX	stalkie_big_nohaplotig	exon	26319878	26320682	99	-	.	Parent=FBgn0031853.9.mrna1;Target=FBgn0031853.9 1256 2060 +
ChrX	stalkie_big_nohaplotig	exon	26320744	26321998	99	-	.	Parent=FBgn0031853.9.mrna1;Target=FBgn0031853.9 1 1255 +
ChrX	stalkie_big_nohaplotig	CDS	26319694	26319766	.	-	1	Parent=FBgn0031853.9.mrna1;Target=FBgn0031853.9 2061 2133 +
ChrX	stalkie_big_nohaplotig	CDS	26319878	26320682	.	-	2	Parent=FBgn0031853.9.mrna1;Target=FBgn0031853.9 1256 2060 +
ChrX	stalkie_big_nohaplotig	CDS	26320744	26321998	.	-	0	Parent=FBgn0031853.9.mrna1;Target=FBgn0031853.9 1 1255 +
ChrX	gffcl	locus	26331472	26595682	.	+	.	ID=RLOC_00001557;geneIDs=FBgn0015600.1.path1;transcripts=FBgn0015600.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26331472	26595682	.	+	.	ID=FBgn0015600.1.mrna1;geneID=FBgn0015600.1.path1;Name=FBgn0015600.1;Dir=sensecoverage=99.6;identity=99.4;matches=6759;mismatches=9;indels=33;unknowns=0;locus=RLOC_00001557
ChrX	stalkie_big_nohaplotig	exon	26331472	26335139	98	+	.	Parent=FBgn0015600.1.mrna1;Target=FBgn0015600.1 31 3731 +
ChrX	stalkie_big_nohaplotig	exon	26401697	26401791	100	+	.	Parent=FBgn0015600.1.mrna1;Target=FBgn0015600.1 3732 3826 +
ChrX	stalkie_big_nohaplotig	exon	26444615	26444743	100	+	.	Parent=FBgn0015600.1.mrna1;Target=FBgn0015600.1 3827 3955 +
ChrX	stalkie_big_nohaplotig	exon	26469090	26469221	100	+	.	Parent=FBgn0015600.1.mrna1;Target=FBgn0015600.1 3956 4087 +
ChrX	stalkie_big_nohaplotig	exon	26576137	26576399	100	+	.	Parent=FBgn0015600.1.mrna1;Target=FBgn0015600.1 4088 4350 +
ChrX	stalkie_big_nohaplotig	exon	26576473	26576745	100	+	.	Parent=FBgn0015600.1.mrna1;Target=FBgn0015600.1 4351 4623 +
ChrX	stalkie_big_nohaplotig	exon	26592309	26592468	100	+	.	Parent=FBgn0015600.1.mrna1;Target=FBgn0015600.1 4624 4783 +
ChrX	stalkie_big_nohaplotig	exon	26592557	26593382	99	+	.	Parent=FBgn0015600.1.mrna1;Target=FBgn0015600.1 4784 5609 +
ChrX	stalkie_big_nohaplotig	exon	26594461	26595682	100	+	.	Parent=FBgn0015600.1.mrna1;Target=FBgn0015600.1 5610 6831 +
ChrX	stalkie_big_nohaplotig	CDS	26331472	26335139	.	+	0	Parent=FBgn0015600.1.mrna1;Target=FBgn0015600.1 31 3731 +
ChrX	stalkie_big_nohaplotig	CDS	26401697	26401791	.	+	1	Parent=FBgn0015600.1.mrna1;Target=FBgn0015600.1 3732 3826 +
ChrX	stalkie_big_nohaplotig	CDS	26444615	26444743	.	+	2	Parent=FBgn0015600.1.mrna1;Target=FBgn0015600.1 3827 3955 +
ChrX	stalkie_big_nohaplotig	CDS	26469090	26469221	.	+	2	Parent=FBgn0015600.1.mrna1;Target=FBgn0015600.1 3956 4087 +
ChrX	stalkie_big_nohaplotig	CDS	26576137	26576399	.	+	2	Parent=FBgn0015600.1.mrna1;Target=FBgn0015600.1 4088 4350 +
ChrX	stalkie_big_nohaplotig	CDS	26576473	26576745	.	+	0	Parent=FBgn0015600.1.mrna1;Target=FBgn0015600.1 4351 4623 +
ChrX	stalkie_big_nohaplotig	CDS	26592309	26592468	.	+	0	Parent=FBgn0015600.1.mrna1;Target=FBgn0015600.1 4624 4783 +
ChrX	stalkie_big_nohaplotig	CDS	26592557	26593382	.	+	2	Parent=FBgn0015600.1.mrna1;Target=FBgn0015600.1 4784 5609 +
ChrX	stalkie_big_nohaplotig	CDS	26594461	26595682	.	+	1	Parent=FBgn0015600.1.mrna1;Target=FBgn0015600.1 5610 6831 +
ChrX	gffcl	locus	26434364	26436260	.	+	.	ID=RLOC_00001558;geneIDs=comp148220_c0_seq1.path1;transcripts=comp148220_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26434364	26436260	.	+	.	ID=comp148220_c0_seq1.mrna1;geneID=comp148220_c0_seq1.path1;Name=comp148220_c0_seq1;Dir=antisensecoverage=97.1;identity=99.5;matches=915;mismatches=4;indels=1;unknowns=0;locus=RLOC_00001558
ChrX	stalkie_big_nohaplotig	exon	26434364	26434980	99	+	.	Parent=comp148220_c0_seq1.mrna1;Target=comp148220_c0_seq1 319 936 -
ChrX	stalkie_big_nohaplotig	exon	26435959	26436260	98	+	.	Parent=comp148220_c0_seq1.mrna1;Target=comp148220_c0_seq1 17 318 -
ChrX	stalkie_big_nohaplotig	CDS	26434869	26434980	.	+	0	Parent=comp148220_c0_seq1.mrna1;Target=comp148220_c0_seq1 319 430 .
ChrX	stalkie_big_nohaplotig	CDS	26435959	26435999	.	+	2	Parent=comp148220_c0_seq1.mrna1;Target=comp148220_c0_seq1 278 318 .
ChrX	gffcl	locus	26438700	26440417	.	-	.	ID=RLOC_00001559;geneIDs=FBgn0037549.1.path1;transcripts=FBgn0037549.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26438700	26440417	.	-	.	ID=FBgn0037549.1.mrna1;geneID=FBgn0037549.1.path1;Name=FBgn0037549.1;Dir=sensecoverage=100.0;identity=99.8;matches=1404;mismatches=3;indels=0;unknowns=0;locus=RLOC_00001559
ChrX	stalkie_big_nohaplotig	exon	26438700	26438922	99	-	.	Parent=FBgn0037549.1.mrna1;Target=FBgn0037549.1 1185 1407 +
ChrX	stalkie_big_nohaplotig	exon	26438979	26439079	100	-	.	Parent=FBgn0037549.1.mrna1;Target=FBgn0037549.1 1084 1184 +
ChrX	stalkie_big_nohaplotig	exon	26439156	26439296	100	-	.	Parent=FBgn0037549.1.mrna1;Target=FBgn0037549.1 943 1083 +
ChrX	stalkie_big_nohaplotig	exon	26439350	26439743	99	-	.	Parent=FBgn0037549.1.mrna1;Target=FBgn0037549.1 549 942 +
ChrX	stalkie_big_nohaplotig	exon	26439804	26440279	100	-	.	Parent=FBgn0037549.1.mrna1;Target=FBgn0037549.1 73 548 +
ChrX	stalkie_big_nohaplotig	exon	26440346	26440417	100	-	.	Parent=FBgn0037549.1.mrna1;Target=FBgn0037549.1 1 72 +
ChrX	stalkie_big_nohaplotig	CDS	26438700	26438922	.	-	1	Parent=FBgn0037549.1.mrna1;Target=FBgn0037549.1 1185 1407 +
ChrX	stalkie_big_nohaplotig	CDS	26438979	26439079	.	-	0	Parent=FBgn0037549.1.mrna1;Target=FBgn0037549.1 1084 1184 +
ChrX	stalkie_big_nohaplotig	CDS	26439156	26439296	.	-	0	Parent=FBgn0037549.1.mrna1;Target=FBgn0037549.1 943 1083 +
ChrX	stalkie_big_nohaplotig	CDS	26439350	26439743	.	-	1	Parent=FBgn0037549.1.mrna1;Target=FBgn0037549.1 549 942 +
ChrX	stalkie_big_nohaplotig	CDS	26439804	26440279	.	-	0	Parent=FBgn0037549.1.mrna1;Target=FBgn0037549.1 73 548 +
ChrX	stalkie_big_nohaplotig	CDS	26440346	26440417	.	-	0	Parent=FBgn0037549.1.mrna1;Target=FBgn0037549.1 1 72 +
ChrX	gffcl	locus	26445361	26449918	.	-	.	ID=RLOC_00001560;geneIDs=FBgn0041630.1.path1;transcripts=FBgn0041630.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26445361	26449918	.	-	.	ID=FBgn0041630.1.mrna1;geneID=FBgn0041630.1.path1;Name=FBgn0041630.1;Dir=sensecoverage=100.0;identity=99.9;matches=1382;mismatches=0;indels=1;unknowns=0;locus=RLOC_00001560
ChrX	stalkie_big_nohaplotig	exon	26445361	26445590	99	-	.	Parent=FBgn0041630.1.mrna1;Target=FBgn0041630.1 1153 1383 +
ChrX	stalkie_big_nohaplotig	exon	26446333	26446534	100	-	.	Parent=FBgn0041630.1.mrna1;Target=FBgn0041630.1 951 1152 +
ChrX	stalkie_big_nohaplotig	exon	26446637	26446766	100	-	.	Parent=FBgn0041630.1.mrna1;Target=FBgn0041630.1 821 950 +
ChrX	stalkie_big_nohaplotig	exon	26447547	26447865	100	-	.	Parent=FBgn0041630.1.mrna1;Target=FBgn0041630.1 502 820 +
ChrX	stalkie_big_nohaplotig	exon	26447944	26448047	100	-	.	Parent=FBgn0041630.1.mrna1;Target=FBgn0041630.1 398 501 +
ChrX	stalkie_big_nohaplotig	exon	26448217	26448400	100	-	.	Parent=FBgn0041630.1.mrna1;Target=FBgn0041630.1 214 397 +
ChrX	stalkie_big_nohaplotig	exon	26448711	26448790	100	-	.	Parent=FBgn0041630.1.mrna1;Target=FBgn0041630.1 134 213 +
ChrX	stalkie_big_nohaplotig	exon	26449786	26449918	100	-	.	Parent=FBgn0041630.1.mrna1;Target=FBgn0041630.1 1 133 +
ChrX	stalkie_big_nohaplotig	CDS	26445361	26445590	.	-	0	Parent=FBgn0041630.1.mrna1;Target=FBgn0041630.1 1153 1383 +
ChrX	stalkie_big_nohaplotig	CDS	26446333	26446534	.	-	1	Parent=FBgn0041630.1.mrna1;Target=FBgn0041630.1 951 1152 +
ChrX	stalkie_big_nohaplotig	CDS	26446637	26446766	.	-	2	Parent=FBgn0041630.1.mrna1;Target=FBgn0041630.1 821 950 +
ChrX	stalkie_big_nohaplotig	CDS	26447547	26447865	.	-	0	Parent=FBgn0041630.1.mrna1;Target=FBgn0041630.1 502 820 +
ChrX	stalkie_big_nohaplotig	CDS	26447944	26448047	.	-	2	Parent=FBgn0041630.1.mrna1;Target=FBgn0041630.1 398 501 +
ChrX	stalkie_big_nohaplotig	CDS	26448217	26448400	.	-	0	Parent=FBgn0041630.1.mrna1;Target=FBgn0041630.1 214 397 +
ChrX	stalkie_big_nohaplotig	CDS	26448711	26448790	.	-	2	Parent=FBgn0041630.1.mrna1;Target=FBgn0041630.1 134 213 +
ChrX	stalkie_big_nohaplotig	CDS	26449786	26449918	.	-	0	Parent=FBgn0041630.1.mrna1;Target=FBgn0041630.1 1 133 +
ChrX	gffcl	locus	26475317	26475864	.	-	.	ID=RLOC_00001561;geneIDs=comp156383_c0_seq1.path1;transcripts=comp156383_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26475317	26475864	.	-	.	ID=comp156383_c0_seq1.mrna1;geneID=comp156383_c0_seq1.path1;Name=comp156383_c0_seq1;Dir=sensecoverage=99.8;identity=97.5;matches=472;mismatches=11;indels=1;unknowns=0;Target=comp156383_c0_seq1 2 82 +;locus=RLOC_00001561
ChrX	stalkie_big_nohaplotig	exon	26475317	26475517	98	-	.	Parent=comp156383_c0_seq1.mrna1;Target=comp156383_c0_seq1 284 484 +
ChrX	stalkie_big_nohaplotig	exon	26475583	26475864	96	-	.	Parent=comp156383_c0_seq1.mrna1;Target=comp156383_c0_seq1 1 283 +
ChrX	stalkie_big_nohaplotig	CDS	26475784	26475863	.	-	0	Parent=comp156383_c0_seq1.mrna1
ChrX	gffcl	locus	26494204	26494796	.	-	.	ID=RLOC_00001562;geneIDs=Dp_FBgn0249362.path5;transcripts=Dp_FBgn0249362.mrna5
ChrX	stalkie_big_nohaplotig	mRNA	26494204	26494796	.	-	.	ID=Dp_FBgn0249362.mrna5;geneID=Dp_FBgn0249362.path5;Name=Dp_FBgn0249362;Dir=indeterminatecoverage=100.0;identity=99.3;matches=590;mismatches=3;indels=1;unknowns=0;Target=Dp_FBgn0249362 594 1 .;locus=RLOC_00001562
ChrX	stalkie_big_nohaplotig	exon	26494204	26494796	99	-	.	Parent=Dp_FBgn0249362.mrna5
ChrX	stalkie_big_nohaplotig	CDS	26494204	26494796	.	-	0	Parent=Dp_FBgn0249362.mrna5
ChrX	gffcl	locus	26496104	26497039	.	-	.	ID=RLOC_00001563;geneIDs=ORF2022.path1;transcripts=ORF2022.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26496104	26497039	.	-	.	ID=ORF2022.mrna1;geneID=ORF2022.path1;Name=ORF2022;Dir=indeterminatecoverage=100.0;identity=99.4;matches=930;mismatches=6;indels=0;unknowns=0;Target=ORF2022 936 1 .;locus=RLOC_00001563
ChrX	stalkie_big_nohaplotig	exon	26496104	26497039	99	-	.	Parent=ORF2022.mrna1
ChrX	stalkie_big_nohaplotig	CDS	26496104	26497039	.	-	0	Parent=ORF2022.mrna1
ChrX	gffcl	locus	26548616	26549035	.	-	.	ID=RLOC_00001565;geneIDs=comp119180_c0_seq1.path1;transcripts=comp119180_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26548616	26549035	.	-	.	ID=comp119180_c0_seq1.mrna1;geneID=comp119180_c0_seq1.path1;Name=comp119180_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=420;mismatches=0;indels=0;unknowns=0;Target=comp119180_c0_seq1 420 1 .;CDS_Target=comp119180_c0_seq1 323 3 .;locus=RLOC_00001565
ChrX	stalkie_big_nohaplotig	exon	26548616	26549035	100	-	.	Parent=comp119180_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	26548713	26549033	.	-	0	Parent=comp119180_c0_seq1.mrna1
ChrX	gffcl	locus	26557780	26563421	.	-	.	ID=RLOC_00001566;geneIDs=comp160967_c0_seq1.path1;transcripts=comp160967_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26557780	26563421	.	-	.	ID=comp160967_c0_seq1.mrna1;geneID=comp160967_c0_seq1.path1;Name=comp160967_c0_seq1;Dir=sensecoverage=100.0;identity=98.1;matches=894;mismatches=17;indels=0;unknowns=0;Target=comp160967_c0_seq1 246 911 +;locus=RLOC_00001566
ChrX	stalkie_big_nohaplotig	exon	26557780	26558522	98	-	.	Parent=comp160967_c0_seq1.mrna1;Target=comp160967_c0_seq1 169 911 +
ChrX	stalkie_big_nohaplotig	exon	26561448	26561506	100	-	.	Parent=comp160967_c0_seq1.mrna1;Target=comp160967_c0_seq1 110 168 +
ChrX	stalkie_big_nohaplotig	exon	26561570	26561646	94	-	.	Parent=comp160967_c0_seq1.mrna1;Target=comp160967_c0_seq1 33 109 +
ChrX	stalkie_big_nohaplotig	exon	26563390	26563421	93	-	.	Parent=comp160967_c0_seq1.mrna1;Target=comp160967_c0_seq1 1 32 +
ChrX	stalkie_big_nohaplotig	CDS	26557780	26558445	.	-	0	Parent=comp160967_c0_seq1.mrna1
ChrX	gffcl	locus	26597625	26599615	.	+	.	ID=RLOC_00001567;geneIDs=comp163727_c0_seq1.path1;transcripts=comp163727_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26597625	26599615	.	+	.	ID=comp163727_c0_seq1.mrna1;geneID=comp163727_c0_seq1.path1;Name=comp163727_c0_seq1;Dir=indeterminatecoverage=99.8;identity=92.2;matches=1889;mismatches=61;indels=99;unknowns=0;Target=comp163727_c0_seq1 2012 5 .;CDS_Target=comp163727_c0_seq1 2012 1857 .;locus=RLOC_00001567
ChrX	stalkie_big_nohaplotig	exon	26597625	26599615	92	+	.	Parent=comp163727_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	26599459	26599615	.	+	0	Parent=comp163727_c0_seq1.mrna1
ChrX	gffcl	locus	26599876	26600406	.	+	.	ID=RLOC_00001568;geneIDs=comp155291_c0_seq1.path1;transcripts=comp155291_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26599876	26600406	.	+	.	ID=comp155291_c0_seq1.mrna1;geneID=comp155291_c0_seq1.path1;Name=comp155291_c0_seq1;Dir=indeterminatecoverage=99.3;identity=95.9;matches=521;mismatches=10;indels=12;unknowns=0;Target=comp155291_c0_seq1 546 4 .;CDS_Target=comp155291_c0_seq1 412 242 .;locus=RLOC_00001568
ChrX	stalkie_big_nohaplotig	exon	26599876	26600406	95	+	.	Parent=comp155291_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	26600102	26600272	.	+	0	Parent=comp155291_c0_seq1.mrna1
ChrX	gffcl	locus	26600637	26601052	.	-	.	ID=RLOC_00001569;geneIDs=comp153920_c0_seq1.path1;transcripts=comp153920_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26600637	26601052	.	-	.	ID=comp153920_c0_seq1.mrna1;geneID=comp153920_c0_seq1.path1;Name=comp153920_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=411;mismatches=5;indels=1;unknowns=0;Target=comp153920_c0_seq1 417 1 .;CDS_Target=comp153920_c0_seq1 297 235 .;locus=RLOC_00001569
ChrX	stalkie_big_nohaplotig	exon	26600637	26601052	98	-	.	Parent=comp153920_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	26600757	26600818	.	-	0	Parent=comp153920_c0_seq1.mrna1
ChrX	gffcl	locus	26601433	26602104	.	+	.	ID=RLOC_00001570;geneIDs=comp59100_c0_seq1.path1,comp135448_c0_seq1.path1;transcripts=comp135448_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26601433	26601804	.	+	.	ID=comp135448_c0_seq1.mrna1;geneID=comp135448_c0_seq1.path1;Name=comp135448_c0_seq1;Dir=indeterminatecoverage=97.6;identity=98.9;matches=368;mismatches=4;indels=0;unknowns=0;Target=comp135448_c0_seq1 381 10 .;CDS_Target=comp135448_c0_seq1 353 252 .;locus=RLOC_00001570
ChrX	stalkie_big_nohaplotig	exon	26601433	26601804	98	+	.	Parent=comp135448_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	26601675	26601776	.	+	0	Parent=comp135448_c0_seq1.mrna1
ChrX	gffcl	locus	26618033	26620893	.	-	.	ID=RLOC_00001572;geneIDs=FBgn0040512.1.path1;transcripts=FBgn0040512.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26618033	26620893	.	-	.	ID=FBgn0040512.1.mrna1;geneID=FBgn0040512.1.path1;Name=FBgn0040512.1;Dir=sensecoverage=100.0;identity=100.0;matches=603;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001572
ChrX	stalkie_big_nohaplotig	exon	26618033	26618077	100	-	.	Parent=FBgn0040512.1.mrna1;Target=FBgn0040512.1 559 603 +
ChrX	stalkie_big_nohaplotig	exon	26618497	26618587	100	-	.	Parent=FBgn0040512.1.mrna1;Target=FBgn0040512.1 468 558 +
ChrX	stalkie_big_nohaplotig	exon	26620347	26620726	100	-	.	Parent=FBgn0040512.1.mrna1;Target=FBgn0040512.1 88 467 +
ChrX	stalkie_big_nohaplotig	exon	26620807	26620893	100	-	.	Parent=FBgn0040512.1.mrna1;Target=FBgn0040512.1 1 87 +
ChrX	stalkie_big_nohaplotig	CDS	26618033	26618077	.	-	0	Parent=FBgn0040512.1.mrna1;Target=FBgn0040512.1 559 603 +
ChrX	stalkie_big_nohaplotig	CDS	26618497	26618587	.	-	1	Parent=FBgn0040512.1.mrna1;Target=FBgn0040512.1 468 558 +
ChrX	stalkie_big_nohaplotig	CDS	26620347	26620726	.	-	0	Parent=FBgn0040512.1.mrna1;Target=FBgn0040512.1 88 467 +
ChrX	stalkie_big_nohaplotig	CDS	26620807	26620893	.	-	0	Parent=FBgn0040512.1.mrna1;Target=FBgn0040512.1 1 87 +
ChrX	gffcl	locus	26621090	26623849	.	+	.	ID=RLOC_00001573;geneIDs=FBgn0036652.1.path1;transcripts=FBgn0036652.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26621090	26623849	.	+	.	ID=FBgn0036652.1.mrna1;geneID=FBgn0036652.1.path1;Name=FBgn0036652.1;Dir=sensecoverage=100.0;identity=99.1;matches=2004;mismatches=18;indels=0;unknowns=0;locus=RLOC_00001573
ChrX	stalkie_big_nohaplotig	exon	26621090	26621671	99	+	.	Parent=FBgn0036652.1.mrna1;Target=FBgn0036652.1 1 582 +
ChrX	stalkie_big_nohaplotig	exon	26621749	26622621	99	+	.	Parent=FBgn0036652.1.mrna1;Target=FBgn0036652.1 583 1455 +
ChrX	stalkie_big_nohaplotig	exon	26622682	26622850	98	+	.	Parent=FBgn0036652.1.mrna1;Target=FBgn0036652.1 1456 1624 +
ChrX	stalkie_big_nohaplotig	exon	26623355	26623562	98	+	.	Parent=FBgn0036652.1.mrna1;Target=FBgn0036652.1 1625 1832 +
ChrX	stalkie_big_nohaplotig	exon	26623660	26623849	99	+	.	Parent=FBgn0036652.1.mrna1;Target=FBgn0036652.1 1833 2022 +
ChrX	stalkie_big_nohaplotig	CDS	26621090	26621671	.	+	0	Parent=FBgn0036652.1.mrna1;Target=FBgn0036652.1 1 582 +
ChrX	stalkie_big_nohaplotig	CDS	26621749	26622621	.	+	0	Parent=FBgn0036652.1.mrna1;Target=FBgn0036652.1 583 1455 +
ChrX	stalkie_big_nohaplotig	CDS	26622682	26622850	.	+	0	Parent=FBgn0036652.1.mrna1;Target=FBgn0036652.1 1456 1624 +
ChrX	stalkie_big_nohaplotig	CDS	26623355	26623562	.	+	2	Parent=FBgn0036652.1.mrna1;Target=FBgn0036652.1 1625 1832 +
ChrX	stalkie_big_nohaplotig	CDS	26623660	26623849	.	+	1	Parent=FBgn0036652.1.mrna1;Target=FBgn0036652.1 1833 2022 +
ChrX	gffcl	locus	26624954	26656813	.	+	.	ID=RLOC_00001574;geneIDs=comp157649_c0_seq1.path1;transcripts=comp157649_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26624954	26656813	.	+	.	ID=comp157649_c0_seq1.mrna1;geneID=comp157649_c0_seq1.path1;Name=comp157649_c0_seq1;Dir=indeterminatecoverage=87.9;identity=91.4;matches=1064;mismatches=57;indels=43;unknowns=0;Target=comp157649_c0_seq1 596 519 .;locus=RLOC_00001574
ChrX	stalkie_big_nohaplotig	exon	26624954	26625851	92	+	.	Parent=comp157649_c0_seq1.mrna1;Target=comp157649_c0_seq1 917 1 .
ChrX	stalkie_big_nohaplotig	exon	26625897	26626089	88	+	.	Parent=comp157649_c0_seq1.mrna1;Target=comp157649_c0_seq1 1111 919 .
ChrX	stalkie_big_nohaplotig	exon	26652638	26652641	100	+	.	Parent=comp157649_c0_seq1.mrna1;Target=comp157649_c0_seq1 1172 1169 .
ChrX	stalkie_big_nohaplotig	exon	26653943	26653952	100	+	.	Parent=comp157649_c0_seq1.mrna1;Target=comp157649_c0_seq1 1182 1173 .
ChrX	stalkie_big_nohaplotig	exon	26656788	26656813	80	+	.	Parent=comp157649_c0_seq1.mrna1;Target=comp157649_c0_seq1 1222 1197 .
ChrX	stalkie_big_nohaplotig	CDS	26625467	26625544	.	+	0	Parent=comp157649_c0_seq1.mrna1
ChrX	gffcl	locus	26631592	26632184	.	-	.	ID=RLOC_00001575;geneIDs=FBgn0063485.1.path2;transcripts=FBgn0063485.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	26631592	26632184	.	-	.	ID=FBgn0063485.1.mrna2;geneID=FBgn0063485.1.path2;Name=FBgn0063485.1;Dir=sensecoverage=42.7;identity=100.0;matches=341;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001575
ChrX	stalkie_big_nohaplotig	exon	26631592	26631657	100	-	.	Parent=FBgn0063485.1.mrna2;Target=FBgn0063485.1 733 798 +
ChrX	stalkie_big_nohaplotig	exon	26631910	26632184	100	-	.	Parent=FBgn0063485.1.mrna2;Target=FBgn0063485.1 458 732 +
ChrX	stalkie_big_nohaplotig	CDS	26631592	26631657	.	-	2	Parent=FBgn0063485.1.mrna2;Target=FBgn0063485.1 733 798 +
ChrX	stalkie_big_nohaplotig	CDS	26631910	26632184	.	-	1	Parent=FBgn0063485.1.mrna2;Target=FBgn0063485.1 458 732 +
ChrX	gffcl	locus	26633081	26633200	.	-	.	ID=RLOC_00001576;geneIDs=Dp_FBgn0078325.path1;transcripts=Dp_FBgn0078325.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26633081	26633200	.	-	.	ID=Dp_FBgn0078325.mrna1;geneID=Dp_FBgn0078325.path1;Name=Dp_FBgn0078325;Dir=indeterminatecoverage=16.0;identity=100.0;matches=120;mismatches=0;indels=0;unknowns=0;Target=Dp_FBgn0078325 120 1 .;locus=RLOC_00001576
ChrX	stalkie_big_nohaplotig	exon	26633081	26633200	100	-	.	Parent=Dp_FBgn0078325.mrna1
ChrX	stalkie_big_nohaplotig	CDS	26633081	26633200	.	-	0	Parent=Dp_FBgn0078325.mrna1
ChrX	gffcl	locus	26679285	26679570	.	+	.	ID=RLOC_00001577;geneIDs=comp138826_c1_seq1.path1;transcripts=comp138826_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26679285	26679570	.	+	.	ID=comp138826_c1_seq1.mrna1;geneID=comp138826_c1_seq1.path1;Name=comp138826_c1_seq1;Dir=indeterminatecoverage=100.0;identity=83.0;matches=273;mismatches=8;indels=48;unknowns=0;Target=comp138826_c1_seq1 324 1 .;CDS_Target=comp138826_c1_seq1 78 1 .;locus=RLOC_00001577
ChrX	stalkie_big_nohaplotig	exon	26679285	26679570	82	+	.	Parent=comp138826_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	26679285	26679362	.	+	0	Parent=comp138826_c1_seq1.mrna1
ChrX	gffcl	locus	26680244	26691410	.	-	.	ID=RLOC_00001578;geneIDs=FBgn0031703.1.path1;transcripts=FBgn0031703.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26680244	26691410	.	-	.	ID=FBgn0031703.1.mrna1;geneID=FBgn0031703.1.path1;Name=FBgn0031703.1;Dir=sensecoverage=100.0;identity=99.8;matches=1826;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001578
ChrX	stalkie_big_nohaplotig	exon	26680244	26680471	98	-	.	Parent=FBgn0031703.1.mrna1;Target=FBgn0031703.1 1603 1830 +
ChrX	stalkie_big_nohaplotig	exon	26680952	26681093	100	-	.	Parent=FBgn0031703.1.mrna1;Target=FBgn0031703.1 1461 1602 +
ChrX	stalkie_big_nohaplotig	exon	26681156	26682499	100	-	.	Parent=FBgn0031703.1.mrna1;Target=FBgn0031703.1 117 1460 +
ChrX	stalkie_big_nohaplotig	exon	26691295	26691410	99	-	.	Parent=FBgn0031703.1.mrna1;Target=FBgn0031703.1 1 116 +
ChrX	stalkie_big_nohaplotig	CDS	26680244	26680471	.	-	0	Parent=FBgn0031703.1.mrna1;Target=FBgn0031703.1 1603 1830 +
ChrX	stalkie_big_nohaplotig	CDS	26680952	26681093	.	-	1	Parent=FBgn0031703.1.mrna1;Target=FBgn0031703.1 1461 1602 +
ChrX	stalkie_big_nohaplotig	CDS	26681156	26682499	.	-	1	Parent=FBgn0031703.1.mrna1;Target=FBgn0031703.1 117 1460 +
ChrX	stalkie_big_nohaplotig	CDS	26691295	26691410	.	-	0	Parent=FBgn0031703.1.mrna1;Target=FBgn0031703.1 1 116 +
ChrX	gffcl	locus	26703042	26704635	.	+	.	ID=RLOC_00001579;geneIDs=FBgn0250906.1.path1;transcripts=FBgn0250906.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26703042	26704635	.	+	.	ID=FBgn0250906.1.mrna1;geneID=FBgn0250906.1.path1;Name=FBgn0250906.1;Dir=sensecoverage=100.0;identity=99.6;matches=1381;mismatches=5;indels=0;unknowns=0;locus=RLOC_00001579
ChrX	stalkie_big_nohaplotig	exon	26703042	26703244	100	+	.	Parent=FBgn0250906.1.mrna1;Target=FBgn0250906.1 1 203 +
ChrX	stalkie_big_nohaplotig	exon	26703301	26703409	97	+	.	Parent=FBgn0250906.1.mrna1;Target=FBgn0250906.1 204 312 +
ChrX	stalkie_big_nohaplotig	exon	26703484	26704319	99	+	.	Parent=FBgn0250906.1.mrna1;Target=FBgn0250906.1 313 1148 +
ChrX	stalkie_big_nohaplotig	exon	26704398	26704635	100	+	.	Parent=FBgn0250906.1.mrna1;Target=FBgn0250906.1 1149 1386 +
ChrX	stalkie_big_nohaplotig	CDS	26703042	26703244	.	+	0	Parent=FBgn0250906.1.mrna1;Target=FBgn0250906.1 1 203 +
ChrX	stalkie_big_nohaplotig	CDS	26703301	26703409	.	+	1	Parent=FBgn0250906.1.mrna1;Target=FBgn0250906.1 204 312 +
ChrX	stalkie_big_nohaplotig	CDS	26703484	26704319	.	+	0	Parent=FBgn0250906.1.mrna1;Target=FBgn0250906.1 313 1148 +
ChrX	stalkie_big_nohaplotig	CDS	26704398	26704635	.	+	1	Parent=FBgn0250906.1.mrna1;Target=FBgn0250906.1 1149 1386 +
ChrX	gffcl	locus	26706271	26706765	.	+	.	ID=RLOC_00001580;geneIDs=comp146340_c0_seq1.path1;transcripts=comp146340_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26706271	26706765	.	+	.	ID=comp146340_c0_seq1.mrna1;geneID=comp146340_c0_seq1.path1;Name=comp146340_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.6;matches=493;mismatches=2;indels=0;unknowns=0;Target=comp146340_c0_seq1 503 9 .;CDS_Target=comp146340_c0_seq1 220 77 .;locus=RLOC_00001580
ChrX	stalkie_big_nohaplotig	exon	26706271	26706765	99	+	.	Parent=comp146340_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	26706339	26706482	.	+	0	Parent=comp146340_c0_seq1.mrna1
ChrX	gffcl	locus	26706932	26756307	.	.	.	ID=RLOC_00001581;geneIDs=comp146959_c0_seq1.path1,comp156634_c3_seq1.path2;transcripts=comp146959_c0_seq1.mrna1,comp156634_c3_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	26706932	26756302	.	-	.	ID=comp146959_c0_seq1.mrna1;geneID=comp146959_c0_seq1.path1;Name=comp146959_c0_seq1;Dir=antisensecoverage=84.4;identity=93.4;matches=492;mismatches=16;indels=19;unknowns=0;Target=comp146959_c0_seq1 156 392 .;locus=RLOC_00001581
ChrX	stalkie_big_nohaplotig	exon	26706932	26707385	96	-	.	Parent=comp146959_c0_seq1.mrna1;Target=comp146959_c0_seq1 1 464 -
ChrX	stalkie_big_nohaplotig	exon	26708027	26708030	100	-	.	Parent=comp146959_c0_seq1.mrna1;Target=comp146959_c0_seq1 465 468 -
ChrX	stalkie_big_nohaplotig	exon	26726592	26726614	52	-	.	Parent=comp146959_c0_seq1.mrna1;Target=comp146959_c0_seq1 469 482 -
ChrX	stalkie_big_nohaplotig	exon	26732076	26732084	44	-	.	Parent=comp146959_c0_seq1.mrna1;Target=comp146959_c0_seq1 533 541 -
ChrX	stalkie_big_nohaplotig	exon	26734234	26734240	100	-	.	Parent=comp146959_c0_seq1.mrna1;Target=comp146959_c0_seq1 542 548 -
ChrX	stalkie_big_nohaplotig	exon	26740469	26740475	100	-	.	Parent=comp146959_c0_seq1.mrna1;Target=comp146959_c0_seq1 549 555 -
ChrX	stalkie_big_nohaplotig	exon	26756290	26756302	76	-	.	Parent=comp146959_c0_seq1.mrna1;Target=comp146959_c0_seq1 556 568 -
ChrX	stalkie_big_nohaplotig	CDS	26707087	26707313	.	-	0	Parent=comp146959_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26756117	26756307	.	+	.	ID=comp156634_c3_seq1.mrna2;geneID=comp156634_c3_seq1.path2;Name=comp156634_c3_seq1;Dir=indeterminatecoverage=15.6;identity=97.9;matches=188;mismatches=3;indels=1;unknowns=0;Target=comp156634_c3_seq1 1232 1041 .;locus=RLOC_00001581
ChrX	stalkie_big_nohaplotig	exon	26756117	26756307	97	+	.	Parent=comp156634_c3_seq1.mrna2
ChrX	gffcl	locus	26708152	26710483	.	-	.	ID=RLOC_00001582;geneIDs=FBgn0031452.1.path1;transcripts=FBgn0031452.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26708152	26710483	.	-	.	ID=FBgn0031452.1.mrna1;geneID=FBgn0031452.1.path1;Name=FBgn0031452.1;Dir=sensecoverage=100.0;identity=99.4;matches=2186;mismatches=13;indels=0;unknowns=0;locus=RLOC_00001582
ChrX	stalkie_big_nohaplotig	exon	26708152	26710109	99	-	.	Parent=FBgn0031452.1.mrna1;Target=FBgn0031452.1 242 2199 +
ChrX	stalkie_big_nohaplotig	exon	26710186	26710396	99	-	.	Parent=FBgn0031452.1.mrna1;Target=FBgn0031452.1 31 241 +
ChrX	stalkie_big_nohaplotig	exon	26710454	26710483	100	-	.	Parent=FBgn0031452.1.mrna1;Target=FBgn0031452.1 1 30 +
ChrX	stalkie_big_nohaplotig	CDS	26708152	26710109	.	-	2	Parent=FBgn0031452.1.mrna1;Target=FBgn0031452.1 242 2199 +
ChrX	stalkie_big_nohaplotig	CDS	26710186	26710396	.	-	0	Parent=FBgn0031452.1.mrna1;Target=FBgn0031452.1 31 241 +
ChrX	stalkie_big_nohaplotig	CDS	26710454	26710483	.	-	0	Parent=FBgn0031452.1.mrna1;Target=FBgn0031452.1 1 30 +
ChrX	gffcl	locus	26715408	26728787	.	+	.	ID=RLOC_00001583;geneIDs=FBgn0001125.1.path1;transcripts=FBgn0001125.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26715408	26728787	.	+	.	ID=FBgn0001125.1.mrna1;geneID=FBgn0001125.1.path1;Name=FBgn0001125.1;Dir=sensecoverage=100.0;identity=99.8;matches=1288;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001583
ChrX	stalkie_big_nohaplotig	exon	26715408	26715496	100	+	.	Parent=FBgn0001125.1.mrna1;Target=FBgn0001125.1 1 89 +
ChrX	stalkie_big_nohaplotig	exon	26726339	26726495	98	+	.	Parent=FBgn0001125.1.mrna1;Target=FBgn0001125.1 90 246 +
ChrX	stalkie_big_nohaplotig	exon	26727496	26727639	100	+	.	Parent=FBgn0001125.1.mrna1;Target=FBgn0001125.1 247 390 +
ChrX	stalkie_big_nohaplotig	exon	26727811	26728017	100	+	.	Parent=FBgn0001125.1.mrna1;Target=FBgn0001125.1 391 597 +
ChrX	stalkie_big_nohaplotig	exon	26728095	26728787	100	+	.	Parent=FBgn0001125.1.mrna1;Target=FBgn0001125.1 598 1290 +
ChrX	stalkie_big_nohaplotig	CDS	26715408	26715496	.	+	0	Parent=FBgn0001125.1.mrna1;Target=FBgn0001125.1 1 89 +
ChrX	stalkie_big_nohaplotig	CDS	26726339	26726495	.	+	1	Parent=FBgn0001125.1.mrna1;Target=FBgn0001125.1 90 246 +
ChrX	stalkie_big_nohaplotig	CDS	26727496	26727639	.	+	0	Parent=FBgn0001125.1.mrna1;Target=FBgn0001125.1 247 390 +
ChrX	stalkie_big_nohaplotig	CDS	26727811	26728017	.	+	0	Parent=FBgn0001125.1.mrna1;Target=FBgn0001125.1 391 597 +
ChrX	stalkie_big_nohaplotig	CDS	26728095	26728787	.	+	0	Parent=FBgn0001125.1.mrna1;Target=FBgn0001125.1 598 1290 +
ChrX	gffcl	locus	26734622	26738294	.	-	.	ID=RLOC_00001584;geneIDs=FBgn0031379.1.path1;transcripts=FBgn0031379.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26734622	26738294	.	-	.	ID=FBgn0031379.1.mrna1;geneID=FBgn0031379.1.path1;Name=FBgn0031379.1;Dir=sensecoverage=100.0;identity=99.7;matches=1891;mismatches=5;indels=0;unknowns=0;locus=RLOC_00001584
ChrX	stalkie_big_nohaplotig	exon	26734622	26734806	100	-	.	Parent=FBgn0031379.1.mrna1;Target=FBgn0031379.1 1712 1896 +
ChrX	stalkie_big_nohaplotig	exon	26734885	26735009	100	-	.	Parent=FBgn0031379.1.mrna1;Target=FBgn0031379.1 1587 1711 +
ChrX	stalkie_big_nohaplotig	exon	26735627	26735916	100	-	.	Parent=FBgn0031379.1.mrna1;Target=FBgn0031379.1 1297 1586 +
ChrX	stalkie_big_nohaplotig	exon	26736777	26737416	99	-	.	Parent=FBgn0031379.1.mrna1;Target=FBgn0031379.1 657 1296 +
ChrX	stalkie_big_nohaplotig	exon	26737497	26737673	100	-	.	Parent=FBgn0031379.1.mrna1;Target=FBgn0031379.1 480 656 +
ChrX	stalkie_big_nohaplotig	exon	26737757	26738048	98	-	.	Parent=FBgn0031379.1.mrna1;Target=FBgn0031379.1 188 479 +
ChrX	stalkie_big_nohaplotig	exon	26738108	26738294	99	-	.	Parent=FBgn0031379.1.mrna1;Target=FBgn0031379.1 1 187 +
ChrX	stalkie_big_nohaplotig	CDS	26734622	26734806	.	-	2	Parent=FBgn0031379.1.mrna1;Target=FBgn0031379.1 1712 1896 +
ChrX	stalkie_big_nohaplotig	CDS	26734885	26735009	.	-	1	Parent=FBgn0031379.1.mrna1;Target=FBgn0031379.1 1587 1711 +
ChrX	stalkie_big_nohaplotig	CDS	26735627	26735916	.	-	0	Parent=FBgn0031379.1.mrna1;Target=FBgn0031379.1 1297 1586 +
ChrX	stalkie_big_nohaplotig	CDS	26736777	26737416	.	-	1	Parent=FBgn0031379.1.mrna1;Target=FBgn0031379.1 657 1296 +
ChrX	stalkie_big_nohaplotig	CDS	26737497	26737673	.	-	1	Parent=FBgn0031379.1.mrna1;Target=FBgn0031379.1 480 656 +
ChrX	stalkie_big_nohaplotig	CDS	26737757	26738048	.	-	2	Parent=FBgn0031379.1.mrna1;Target=FBgn0031379.1 188 479 +
ChrX	stalkie_big_nohaplotig	CDS	26738108	26738294	.	-	0	Parent=FBgn0031379.1.mrna1;Target=FBgn0031379.1 1 187 +
ChrX	gffcl	locus	26742147	26750179	.	+	.	ID=RLOC_00001585;geneIDs=FBgn0031377.1.path1;transcripts=FBgn0031377.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26742147	26750179	.	+	.	ID=FBgn0031377.1.mrna1;geneID=FBgn0031377.1.path1;Name=FBgn0031377.1;Dir=sensecoverage=100.0;identity=100.0;matches=3111;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001585
ChrX	stalkie_big_nohaplotig	exon	26742147	26742231	100	+	.	Parent=FBgn0031377.1.mrna1;Target=FBgn0031377.1 1 85 +
ChrX	stalkie_big_nohaplotig	exon	26742355	26742529	100	+	.	Parent=FBgn0031377.1.mrna1;Target=FBgn0031377.1 86 260 +
ChrX	stalkie_big_nohaplotig	exon	26742604	26742862	100	+	.	Parent=FBgn0031377.1.mrna1;Target=FBgn0031377.1 261 519 +
ChrX	stalkie_big_nohaplotig	exon	26747377	26748798	100	+	.	Parent=FBgn0031377.1.mrna1;Target=FBgn0031377.1 520 1941 +
ChrX	stalkie_big_nohaplotig	exon	26748863	26749633	100	+	.	Parent=FBgn0031377.1.mrna1;Target=FBgn0031377.1 1942 2712 +
ChrX	stalkie_big_nohaplotig	exon	26749690	26750062	100	+	.	Parent=FBgn0031377.1.mrna1;Target=FBgn0031377.1 2713 3085 +
ChrX	stalkie_big_nohaplotig	exon	26750154	26750179	100	+	.	Parent=FBgn0031377.1.mrna1;Target=FBgn0031377.1 3086 3111 +
ChrX	stalkie_big_nohaplotig	CDS	26742147	26742231	.	+	0	Parent=FBgn0031377.1.mrna1;Target=FBgn0031377.1 1 85 +
ChrX	stalkie_big_nohaplotig	CDS	26742355	26742529	.	+	2	Parent=FBgn0031377.1.mrna1;Target=FBgn0031377.1 86 260 +
ChrX	stalkie_big_nohaplotig	CDS	26742604	26742862	.	+	1	Parent=FBgn0031377.1.mrna1;Target=FBgn0031377.1 261 519 +
ChrX	stalkie_big_nohaplotig	CDS	26747377	26748798	.	+	0	Parent=FBgn0031377.1.mrna1;Target=FBgn0031377.1 520 1941 +
ChrX	stalkie_big_nohaplotig	CDS	26748863	26749633	.	+	0	Parent=FBgn0031377.1.mrna1;Target=FBgn0031377.1 1942 2712 +
ChrX	stalkie_big_nohaplotig	CDS	26749690	26750062	.	+	0	Parent=FBgn0031377.1.mrna1;Target=FBgn0031377.1 2713 3085 +
ChrX	stalkie_big_nohaplotig	CDS	26750154	26750179	.	+	2	Parent=FBgn0031377.1.mrna1;Target=FBgn0031377.1 3086 3111 +
ChrX	gffcl	locus	26850938	26851402	.	+	.	ID=RLOC_00001588;geneIDs=comp146422_c0_seq1.path1;transcripts=comp146422_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26850938	26851402	.	+	.	ID=comp146422_c0_seq1.mrna1;geneID=comp146422_c0_seq1.path1;Name=comp146422_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=454;mismatches=5;indels=8;unknowns=0;Target=comp146422_c0_seq1 461 1 .;CDS_Target=comp146422_c0_seq1 336 277 .;locus=RLOC_00001588
ChrX	stalkie_big_nohaplotig	exon	26850938	26851402	97	+	.	Parent=comp146422_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	26851220	26851277	.	+	0	Parent=comp146422_c0_seq1.mrna1
ChrX	gffcl	locus	26878850	26880055	.	+	.	ID=RLOC_00001589;geneIDs=FBgn0000064.3.path1;transcripts=FBgn0000064.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26878850	26880055	.	+	.	ID=FBgn0000064.3.mrna1;geneID=FBgn0000064.3.path1;Name=FBgn0000064.3;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1202;mismatches=4;indels=0;unknowns=0;Target=FBgn0000064.3 1206 1 .;locus=RLOC_00001589
ChrX	stalkie_big_nohaplotig	exon	26878850	26880055	99	+	.	Parent=FBgn0000064.3.mrna1
ChrX	stalkie_big_nohaplotig	CDS	26878850	26880055	.	+	0	Parent=FBgn0000064.3.mrna1
ChrX	gffcl	locus	26888405	26888789	.	-	.	ID=RLOC_00001590;geneIDs=comp154054_c0_seq1.path1;transcripts=comp154054_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26888405	26888789	.	-	.	ID=comp154054_c0_seq1.mrna1;geneID=comp154054_c0_seq1.path1;Name=comp154054_c0_seq1;Dir=indeterminatecoverage=80.0;identity=93.8;matches=361;mismatches=6;indels=18;unknowns=0;Target=comp154054_c0_seq1 430 64 .;CDS_Target=comp154054_c0_seq1 383 354 .;locus=RLOC_00001590
ChrX	stalkie_big_nohaplotig	exon	26888405	26888789	93	-	.	Parent=comp154054_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	26888452	26888499	.	-	0	Parent=comp154054_c0_seq1.mrna1
ChrX	gffcl	locus	26890146	26892434	.	+	.	ID=RLOC_00001591;geneIDs=comp163395_c0_seq1.path1;transcripts=comp163395_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26890146	26892434	.	+	.	ID=comp163395_c0_seq1.mrna1;geneID=comp163395_c0_seq1.path1;Name=comp163395_c0_seq1;Dir=indeterminatecoverage=90.4;identity=97.1;matches=2222;mismatches=22;indels=45;unknowns=0;Target=comp163395_c0_seq1 2244 1 .;CDS_Target=comp163395_c0_seq1 204 76 .;locus=RLOC_00001591
ChrX	stalkie_big_nohaplotig	exon	26890146	26892434	97	+	.	Parent=comp163395_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	26890221	26890349	.	+	0	Parent=comp163395_c0_seq1.mrna1
ChrX	gffcl	locus	26892822	26904993	.	-	.	ID=RLOC_00001592;geneIDs=comp158913_c0_seq1.path1;transcripts=comp158913_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26892822	26904993	.	-	.	ID=comp158913_c0_seq1.mrna1;geneID=comp158913_c0_seq1.path1;Name=comp158913_c0_seq1;Dir=indeterminatecoverage=73.2;identity=97.5;matches=617;mismatches=16;indels=0;unknowns=0;Target=comp158913_c0_seq1 740 576 .;locus=RLOC_00001592
ChrX	stalkie_big_nohaplotig	exon	26892822	26893419	97	-	.	Parent=comp158913_c0_seq1.mrna1;Target=comp158913_c0_seq1 865 268 .
ChrX	stalkie_big_nohaplotig	exon	26896363	26896369	100	-	.	Parent=comp158913_c0_seq1.mrna1;Target=comp158913_c0_seq1 267 261 .
ChrX	stalkie_big_nohaplotig	exon	26896534	26896543	100	-	.	Parent=comp158913_c0_seq1.mrna1;Target=comp158913_c0_seq1 260 251 .
ChrX	stalkie_big_nohaplotig	exon	26903783	26903789	85	-	.	Parent=comp158913_c0_seq1.mrna1;Target=comp158913_c0_seq1 250 244 .
ChrX	stalkie_big_nohaplotig	exon	26904983	26904993	81	-	.	Parent=comp158913_c0_seq1.mrna1;Target=comp158913_c0_seq1 243 233 .
ChrX	stalkie_big_nohaplotig	CDS	26892947	26893111	.	-	0	Parent=comp158913_c0_seq1.mrna1
ChrX	gffcl	locus	26894691	27041091	.	-	.	ID=RLOC_00001593;geneIDs=FBgn0031374.1.path1;transcripts=FBgn0031374.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	26894691	27041091	.	-	.	ID=FBgn0031374.1.mrna1;geneID=FBgn0031374.1.path1;Name=FBgn0031374.1;Dir=sensecoverage=100.0;identity=99.8;matches=4523;mismatches=7;indels=0;unknowns=0;locus=RLOC_00001593
ChrX	stalkie_big_nohaplotig	exon	26894691	26894847	100	-	.	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 4374 4530 +
ChrX	stalkie_big_nohaplotig	exon	26896819	26896984	100	-	.	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 4208 4373 +
ChrX	stalkie_big_nohaplotig	exon	26897047	26897235	100	-	.	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 4019 4207 +
ChrX	stalkie_big_nohaplotig	exon	26897320	26897400	100	-	.	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 3938 4018 +
ChrX	stalkie_big_nohaplotig	exon	26898428	26898503	100	-	.	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 3862 3937 +
ChrX	stalkie_big_nohaplotig	exon	26898871	26899025	100	-	.	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 3707 3861 +
ChrX	stalkie_big_nohaplotig	exon	26899092	26899187	100	-	.	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 3611 3706 +
ChrX	stalkie_big_nohaplotig	exon	26903334	26903442	99	-	.	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 3502 3610 +
ChrX	stalkie_big_nohaplotig	exon	26905264	26905406	100	-	.	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 3359 3501 +
ChrX	stalkie_big_nohaplotig	exon	26905489	26905790	100	-	.	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 3057 3358 +
ChrX	stalkie_big_nohaplotig	exon	26905866	26907121	99	-	.	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 1801 3056 +
ChrX	stalkie_big_nohaplotig	exon	26907186	26907890	100	-	.	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 1096 1800 +
ChrX	stalkie_big_nohaplotig	exon	26907954	26908373	99	-	.	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 676 1095 +
ChrX	stalkie_big_nohaplotig	exon	26908439	26908654	100	-	.	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 460 675 +
ChrX	stalkie_big_nohaplotig	exon	26908762	26909005	100	-	.	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 216 459 +
ChrX	stalkie_big_nohaplotig	exon	26915126	26915217	100	-	.	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 124 215 +
ChrX	stalkie_big_nohaplotig	exon	27040969	27041091	100	-	.	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 1 123 +
ChrX	stalkie_big_nohaplotig	CDS	26894691	26894847	.	-	1	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 4374 4530 +
ChrX	stalkie_big_nohaplotig	CDS	26896819	26896984	.	-	2	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 4208 4373 +
ChrX	stalkie_big_nohaplotig	CDS	26897047	26897235	.	-	2	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 4019 4207 +
ChrX	stalkie_big_nohaplotig	CDS	26897320	26897400	.	-	2	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 3938 4018 +
ChrX	stalkie_big_nohaplotig	CDS	26898428	26898503	.	-	0	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 3862 3937 +
ChrX	stalkie_big_nohaplotig	CDS	26898871	26899025	.	-	2	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 3707 3861 +
ChrX	stalkie_big_nohaplotig	CDS	26899092	26899187	.	-	2	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 3611 3706 +
ChrX	stalkie_big_nohaplotig	CDS	26903334	26903442	.	-	0	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 3502 3610 +
ChrX	stalkie_big_nohaplotig	CDS	26905264	26905406	.	-	2	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 3359 3501 +
ChrX	stalkie_big_nohaplotig	CDS	26905489	26905790	.	-	1	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 3057 3358 +
ChrX	stalkie_big_nohaplotig	CDS	26905866	26907121	.	-	0	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 1801 3056 +
ChrX	stalkie_big_nohaplotig	CDS	26907186	26907890	.	-	0	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 1096 1800 +
ChrX	stalkie_big_nohaplotig	CDS	26907954	26908373	.	-	0	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 676 1095 +
ChrX	stalkie_big_nohaplotig	CDS	26908439	26908654	.	-	0	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 460 675 +
ChrX	stalkie_big_nohaplotig	CDS	26908762	26909005	.	-	1	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 216 459 +
ChrX	stalkie_big_nohaplotig	CDS	26915126	26915217	.	-	0	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 124 215 +
ChrX	stalkie_big_nohaplotig	CDS	27040969	27041091	.	-	0	Parent=FBgn0031374.1.mrna1;Target=FBgn0031374.1 1 123 +
ChrX	gffcl	locus	27091075	27095645	.	-	.	ID=RLOC_00001594;geneIDs=comp163539_c1_seq1.path1;transcripts=comp163539_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27091075	27095645	.	-	.	ID=comp163539_c1_seq1.mrna1;geneID=comp163539_c1_seq1.path1;Name=comp163539_c1_seq1;Dir=sensecoverage=100.0;identity=98.1;matches=3244;mismatches=27;indels=37;unknowns=0;locus=RLOC_00001594
ChrX	stalkie_big_nohaplotig	exon	27091075	27091277	99	-	.	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 3070 3272 +
ChrX	stalkie_big_nohaplotig	exon	27091337	27091396	100	-	.	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 3010 3069 +
ChrX	stalkie_big_nohaplotig	exon	27091472	27092191	99	-	.	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 2290 3009 +
ChrX	stalkie_big_nohaplotig	exon	27092268	27092482	99	-	.	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 2074 2289 +
ChrX	stalkie_big_nohaplotig	exon	27092550	27092690	100	-	.	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 1933 2073 +
ChrX	stalkie_big_nohaplotig	exon	27092782	27092958	97	-	.	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 1756 1932 +
ChrX	stalkie_big_nohaplotig	exon	27093043	27093249	98	-	.	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 1549 1755 +
ChrX	stalkie_big_nohaplotig	exon	27093344	27093574	99	-	.	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 1318 1548 +
ChrX	stalkie_big_nohaplotig	exon	27093642	27093845	98	-	.	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 1114 1317 +
ChrX	stalkie_big_nohaplotig	exon	27093917	27094147	98	-	.	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 883 1113 +
ChrX	stalkie_big_nohaplotig	exon	27094211	27094300	100	-	.	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 793 882 +
ChrX	stalkie_big_nohaplotig	exon	27094687	27094956	99	-	.	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 523 792 +
ChrX	stalkie_big_nohaplotig	exon	27095019	27095159	97	-	.	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 382 522 +
ChrX	stalkie_big_nohaplotig	exon	27095229	27095645	90	-	.	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 1 381 +
ChrX	stalkie_big_nohaplotig	CDS	27092174	27092191	.	-	1	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 2290 2307 +
ChrX	stalkie_big_nohaplotig	CDS	27092268	27092482	.	-	0	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 2074 2289 +
ChrX	stalkie_big_nohaplotig	CDS	27092550	27092690	.	-	0	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 1933 2073 +
ChrX	stalkie_big_nohaplotig	CDS	27092782	27092958	.	-	0	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 1756 1932 +
ChrX	stalkie_big_nohaplotig	CDS	27093043	27093249	.	-	0	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 1549 1755 +
ChrX	stalkie_big_nohaplotig	CDS	27093344	27093574	.	-	0	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 1318 1548 +
ChrX	stalkie_big_nohaplotig	CDS	27093642	27093845	.	-	0	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 1114 1317 +
ChrX	stalkie_big_nohaplotig	CDS	27093917	27094147	.	-	0	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 883 1113 +
ChrX	stalkie_big_nohaplotig	CDS	27094211	27094300	.	-	0	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 793 882 +
ChrX	stalkie_big_nohaplotig	CDS	27094687	27094956	.	-	0	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 523 792 +
ChrX	stalkie_big_nohaplotig	CDS	27095019	27095159	.	-	0	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 382 522 +
ChrX	stalkie_big_nohaplotig	CDS	27095229	27095645	.	-	0	Parent=comp163539_c1_seq1.mrna1;Target=comp163539_c1_seq1 1 381 +
ChrX	gffcl	locus	27140106	27158771	.	-	.	ID=RLOC_00001596;geneIDs=comp140616_c0_seq1.path1;transcripts=comp140616_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27140106	27158771	.	-	.	ID=comp140616_c0_seq1.mrna1;geneID=comp140616_c0_seq1.path1;Name=comp140616_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=503;mismatches=3;indels=0;unknowns=0;Target=comp140616_c0_seq1 2 103 .;locus=RLOC_00001596
ChrX	stalkie_big_nohaplotig	exon	27140106	27140305	99	-	.	Parent=comp140616_c0_seq1.mrna1;Target=comp140616_c0_seq1 1 200 -
ChrX	stalkie_big_nohaplotig	exon	27158466	27158771	99	-	.	Parent=comp140616_c0_seq1.mrna1;Target=comp140616_c0_seq1 201 506 -
ChrX	stalkie_big_nohaplotig	CDS	27140107	27140208	.	-	0	Parent=comp140616_c0_seq1.mrna1
ChrX	gffcl	locus	27154552	27160113	.	+	.	ID=RLOC_00001597;geneIDs=comp160091_c1_seq1.path2;transcripts=comp160091_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	27154552	27160113	.	+	.	ID=comp160091_c1_seq1.mrna2;geneID=comp160091_c1_seq1.path2;Name=comp160091_c1_seq1;Dir=indeterminatecoverage=55.7;identity=99.8;matches=617;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001597
ChrX	stalkie_big_nohaplotig	exon	27154552	27154561	100	+	.	Parent=comp160091_c1_seq1.mrna2;Target=comp160091_c1_seq1 501 492 .
ChrX	stalkie_big_nohaplotig	exon	27159506	27160113	99	+	.	Parent=comp160091_c1_seq1.mrna2;Target=comp160091_c1_seq1 1109 502 .
ChrX	gffcl	locus	27165771	27172985	.	-	.	ID=RLOC_00001598;geneIDs=FBgn0031646.1.path1;transcripts=FBgn0031646.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27165771	27172985	.	-	.	ID=FBgn0031646.1.mrna1;geneID=FBgn0031646.1.path1;Name=FBgn0031646.1;Dir=sensecoverage=100.0;identity=99.7;matches=927;mismatches=3;indels=0;unknowns=0;locus=RLOC_00001598
ChrX	stalkie_big_nohaplotig	exon	27165771	27166468	99	-	.	Parent=FBgn0031646.1.mrna1;Target=FBgn0031646.1 233 930 +
ChrX	stalkie_big_nohaplotig	exon	27166533	27166619	100	-	.	Parent=FBgn0031646.1.mrna1;Target=FBgn0031646.1 146 232 +
ChrX	stalkie_big_nohaplotig	exon	27172841	27172985	99	-	.	Parent=FBgn0031646.1.mrna1;Target=FBgn0031646.1 1 145 +
ChrX	stalkie_big_nohaplotig	CDS	27165771	27166468	.	-	2	Parent=FBgn0031646.1.mrna1;Target=FBgn0031646.1 233 930 +
ChrX	stalkie_big_nohaplotig	CDS	27166533	27166619	.	-	2	Parent=FBgn0031646.1.mrna1;Target=FBgn0031646.1 146 232 +
ChrX	stalkie_big_nohaplotig	CDS	27172841	27172985	.	-	0	Parent=FBgn0031646.1.mrna1;Target=FBgn0031646.1 1 145 +
ChrX	gffcl	locus	27173058	27176595	.	-	.	ID=RLOC_00001599;geneIDs=comp140671_c0_seq1.path1;transcripts=comp140671_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27173058	27176595	.	-	.	ID=comp140671_c0_seq1.mrna1;geneID=comp140671_c0_seq1.path1;Name=comp140671_c0_seq1;Dir=sensecoverage=100.0;identity=98.5;matches=256;mismatches=3;indels=1;unknowns=0;locus=RLOC_00001599
ChrX	stalkie_big_nohaplotig	exon	27173058	27173206	99	-	.	Parent=comp140671_c0_seq1.mrna1;Target=comp140671_c0_seq1 111 260 +
ChrX	stalkie_big_nohaplotig	exon	27176486	27176595	97	-	.	Parent=comp140671_c0_seq1.mrna1;Target=comp140671_c0_seq1 1 110 +
ChrX	stalkie_big_nohaplotig	CDS	27173186	27173206	.	-	0	Parent=comp140671_c0_seq1.mrna1;Target=comp140671_c0_seq1 111 131 +
ChrX	stalkie_big_nohaplotig	CDS	27176486	27176593	.	-	0	Parent=comp140671_c0_seq1.mrna1;Target=comp140671_c0_seq1 3 110 +
ChrX	gffcl	locus	27207235	27207809	.	+	.	ID=RLOC_00001600;geneIDs=comp145860_c1_seq1.path1;transcripts=comp145860_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27207235	27207809	.	+	.	ID=comp145860_c1_seq1.mrna1;geneID=comp145860_c1_seq1.path1;Name=comp145860_c1_seq1;Dir=sensecoverage=98.6;identity=100.0;matches=502;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001600
ChrX	stalkie_big_nohaplotig	exon	27207235	27207388	100	+	.	Parent=comp145860_c1_seq1.mrna1;Target=comp145860_c1_seq1 8 161 +
ChrX	stalkie_big_nohaplotig	exon	27207462	27207809	100	+	.	Parent=comp145860_c1_seq1.mrna1;Target=comp145860_c1_seq1 162 509 +
ChrX	stalkie_big_nohaplotig	CDS	27207348	27207388	.	+	0	Parent=comp145860_c1_seq1.mrna1;Target=comp145860_c1_seq1 121 161 +
ChrX	stalkie_big_nohaplotig	CDS	27207462	27207747	.	+	1	Parent=comp145860_c1_seq1.mrna1;Target=comp145860_c1_seq1 162 447 +
ChrX	gffcl	locus	27210404	27210721	.	+	.	ID=RLOC_00001601;geneIDs=comp141088_c0_seq1.path1;transcripts=comp141088_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27210404	27210721	.	+	.	ID=comp141088_c0_seq1.mrna1;geneID=comp141088_c0_seq1.path1;Name=comp141088_c0_seq1;Dir=indeterminatecoverage=94.1;identity=97.8;matches=312;mismatches=6;indels=1;unknowns=0;Target=comp141088_c0_seq1 319 1 .;CDS_Target=comp141088_c0_seq1 214 110 .;locus=RLOC_00001601
ChrX	stalkie_big_nohaplotig	exon	27210404	27210721	97	+	.	Parent=comp141088_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	27210513	27210616	.	+	0	Parent=comp141088_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27234990	27235922	.	-	.	ID=comp93365_c0_seq1.mrna1;geneID=comp93365_c0_seq1.path1;Name=comp93365_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=479;mismatches=0;indels=0;unknowns=0;Target=comp93365_c0_seq1 349 471 .;locus=RLOC_00001602
ChrX	stalkie_big_nohaplotig	exon	27234990	27235011	100	-	.	Parent=comp93365_c0_seq1.mrna1;Target=comp93365_c0_seq1 1 22 -
ChrX	stalkie_big_nohaplotig	exon	27235466	27235922	100	-	.	Parent=comp93365_c0_seq1.mrna1;Target=comp93365_c0_seq1 23 479 -
ChrX	stalkie_big_nohaplotig	CDS	27235792	27235914	.	-	0	Parent=comp93365_c0_seq1.mrna1
ChrX	gffcl	locus	27305723	27306066	.	-	.	ID=RLOC_00001603;geneIDs=comp147878_c0_seq1.path2;transcripts=comp147878_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	27305723	27306066	.	-	.	ID=comp147878_c0_seq1.mrna2;geneID=comp147878_c0_seq1.path2;Name=comp147878_c0_seq1;Dir=indeterminatecoverage=77.7;identity=99.7;matches=343;mismatches=1;indels=0;unknowns=0;Target=comp147878_c0_seq1 420 77 .;CDS_Target=comp147878_c0_seq1 90 77 .;locus=RLOC_00001603
ChrX	stalkie_big_nohaplotig	exon	27305723	27306066	99	-	.	Parent=comp147878_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	27306053	27306066	.	-	1	Parent=comp147878_c0_seq1.mrna2
ChrX	gffcl	locus	27309113	27309479	.	-	.	ID=RLOC_00001604;geneIDs=comp1627528_c0_seq1.path1;transcripts=comp1627528_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27309113	27309479	.	-	.	ID=comp1627528_c0_seq1.mrna1;geneID=comp1627528_c0_seq1.path1;Name=comp1627528_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=253;mismatches=0;indels=0;unknowns=0;Target=comp1627528_c0_seq1 51 179 .;locus=RLOC_00001604
ChrX	stalkie_big_nohaplotig	exon	27309113	27309136	100	-	.	Parent=comp1627528_c0_seq1.mrna1;Target=comp1627528_c0_seq1 1 24 -
ChrX	stalkie_big_nohaplotig	exon	27309251	27309479	100	-	.	Parent=comp1627528_c0_seq1.mrna1;Target=comp1627528_c0_seq1 25 253 -
ChrX	stalkie_big_nohaplotig	CDS	27309277	27309405	.	-	0	Parent=comp1627528_c0_seq1.mrna1
ChrX	gffcl	locus	27353375	27354130	.	-	.	ID=RLOC_00001605;geneIDs=comp153857_c0_seq1.path1;transcripts=comp153857_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27353375	27354130	.	-	.	ID=comp153857_c0_seq1.mrna1;geneID=comp153857_c0_seq1.path1;Name=comp153857_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=737;mismatches=19;indels=3;unknowns=0;Target=comp153857_c0_seq1 759 1 .;CDS_Target=comp153857_c0_seq1 324 196 .;locus=RLOC_00001605
ChrX	stalkie_big_nohaplotig	exon	27353375	27354130	97	-	.	Parent=comp153857_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	27353810	27353938	.	-	0	Parent=comp153857_c0_seq1.mrna1
ChrX	gffcl	locus	27388507	27400248	.	-	.	ID=RLOC_00001607;geneIDs=FBgn0031649.1.path1;transcripts=FBgn0031649.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27388507	27400248	.	-	.	ID=FBgn0031649.1.mrna1;geneID=FBgn0031649.1.path1;Name=FBgn0031649.1;Dir=sensecoverage=100.0;identity=99.9;matches=2469;mismatches=3;indels=0;unknowns=0;locus=RLOC_00001607
ChrX	stalkie_big_nohaplotig	exon	27388507	27388588	100	-	.	Parent=FBgn0031649.1.mrna1;Target=FBgn0031649.1 2391 2472 +
ChrX	stalkie_big_nohaplotig	exon	27388650	27388743	100	-	.	Parent=FBgn0031649.1.mrna1;Target=FBgn0031649.1 2297 2390 +
ChrX	stalkie_big_nohaplotig	exon	27390201	27390696	99	-	.	Parent=FBgn0031649.1.mrna1;Target=FBgn0031649.1 1801 2296 +
ChrX	stalkie_big_nohaplotig	exon	27390751	27391077	99	-	.	Parent=FBgn0031649.1.mrna1;Target=FBgn0031649.1 1474 1800 +
ChrX	stalkie_big_nohaplotig	exon	27391151	27391289	100	-	.	Parent=FBgn0031649.1.mrna1;Target=FBgn0031649.1 1335 1473 +
ChrX	stalkie_big_nohaplotig	exon	27391424	27391743	100	-	.	Parent=FBgn0031649.1.mrna1;Target=FBgn0031649.1 1015 1334 +
ChrX	stalkie_big_nohaplotig	exon	27391806	27392078	100	-	.	Parent=FBgn0031649.1.mrna1;Target=FBgn0031649.1 742 1014 +
ChrX	stalkie_big_nohaplotig	exon	27392209	27392366	100	-	.	Parent=FBgn0031649.1.mrna1;Target=FBgn0031649.1 584 741 +
ChrX	stalkie_big_nohaplotig	exon	27394027	27394256	100	-	.	Parent=FBgn0031649.1.mrna1;Target=FBgn0031649.1 354 583 +
ChrX	stalkie_big_nohaplotig	exon	27395406	27395547	100	-	.	Parent=FBgn0031649.1.mrna1;Target=FBgn0031649.1 212 353 +
ChrX	stalkie_big_nohaplotig	exon	27400038	27400248	100	-	.	Parent=FBgn0031649.1.mrna1;Target=FBgn0031649.1 1 211 +
ChrX	stalkie_big_nohaplotig	CDS	27388507	27388588	.	-	1	Parent=FBgn0031649.1.mrna1;Target=FBgn0031649.1 2391 2472 +
ChrX	stalkie_big_nohaplotig	CDS	27388650	27388743	.	-	2	Parent=FBgn0031649.1.mrna1;Target=FBgn0031649.1 2297 2390 +
ChrX	stalkie_big_nohaplotig	CDS	27390201	27390696	.	-	0	Parent=FBgn0031649.1.mrna1;Target=FBgn0031649.1 1801 2296 +
ChrX	stalkie_big_nohaplotig	CDS	27390751	27391077	.	-	0	Parent=FBgn0031649.1.mrna1;Target=FBgn0031649.1 1474 1800 +
ChrX	stalkie_big_nohaplotig	CDS	27391151	27391289	.	-	1	Parent=FBgn0031649.1.mrna1;Target=FBgn0031649.1 1335 1473 +
ChrX	stalkie_big_nohaplotig	CDS	27391424	27391743	.	-	0	Parent=FBgn0031649.1.mrna1;Target=FBgn0031649.1 1015 1334 +
ChrX	stalkie_big_nohaplotig	CDS	27391806	27392078	.	-	0	Parent=FBgn0031649.1.mrna1;Target=FBgn0031649.1 742 1014 +
ChrX	stalkie_big_nohaplotig	CDS	27392209	27392366	.	-	2	Parent=FBgn0031649.1.mrna1;Target=FBgn0031649.1 584 741 +
ChrX	stalkie_big_nohaplotig	CDS	27394027	27394256	.	-	1	Parent=FBgn0031649.1.mrna1;Target=FBgn0031649.1 354 583 +
ChrX	stalkie_big_nohaplotig	CDS	27395406	27395547	.	-	2	Parent=FBgn0031649.1.mrna1;Target=FBgn0031649.1 212 353 +
ChrX	stalkie_big_nohaplotig	CDS	27400038	27400248	.	-	0	Parent=FBgn0031649.1.mrna1;Target=FBgn0031649.1 1 211 +
ChrX	gffcl	locus	27420334	27422236	.	-	.	ID=RLOC_00001608;geneIDs=FBgn0031651.1.path1;transcripts=FBgn0031651.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27420334	27422236	.	-	.	ID=FBgn0031651.1.mrna1;geneID=FBgn0031651.1.path1;Name=FBgn0031651.1;Dir=sensecoverage=100.0;identity=100.0;matches=756;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001608
ChrX	stalkie_big_nohaplotig	exon	27420334	27420446	100	-	.	Parent=FBgn0031651.1.mrna1;Target=FBgn0031651.1 644 756 +
ChrX	stalkie_big_nohaplotig	exon	27421326	27421521	100	-	.	Parent=FBgn0031651.1.mrna1;Target=FBgn0031651.1 448 643 +
ChrX	stalkie_big_nohaplotig	exon	27421598	27421791	100	-	.	Parent=FBgn0031651.1.mrna1;Target=FBgn0031651.1 254 447 +
ChrX	stalkie_big_nohaplotig	exon	27421893	27422046	100	-	.	Parent=FBgn0031651.1.mrna1;Target=FBgn0031651.1 100 253 +
ChrX	stalkie_big_nohaplotig	exon	27422138	27422236	100	-	.	Parent=FBgn0031651.1.mrna1;Target=FBgn0031651.1 1 99 +
ChrX	stalkie_big_nohaplotig	CDS	27420334	27420446	.	-	2	Parent=FBgn0031651.1.mrna1;Target=FBgn0031651.1 644 756 +
ChrX	stalkie_big_nohaplotig	CDS	27421326	27421521	.	-	0	Parent=FBgn0031651.1.mrna1;Target=FBgn0031651.1 448 643 +
ChrX	stalkie_big_nohaplotig	CDS	27421598	27421791	.	-	2	Parent=FBgn0031651.1.mrna1;Target=FBgn0031651.1 254 447 +
ChrX	stalkie_big_nohaplotig	CDS	27421893	27422046	.	-	0	Parent=FBgn0031651.1.mrna1;Target=FBgn0031651.1 100 253 +
ChrX	stalkie_big_nohaplotig	CDS	27422138	27422236	.	-	0	Parent=FBgn0031651.1.mrna1;Target=FBgn0031651.1 1 99 +
ChrX	gffcl	locus	27424330	27431051	.	+	.	ID=RLOC_00001609;geneIDs=FBgn0015000.1.path1;transcripts=FBgn0015000.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27424330	27431051	.	+	.	ID=FBgn0015000.1.mrna1;geneID=FBgn0015000.1.path1;Name=FBgn0015000.1;Dir=sensecoverage=100.0;identity=99.9;matches=1157;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001609
ChrX	stalkie_big_nohaplotig	exon	27424330	27424457	100	+	.	Parent=FBgn0015000.1.mrna1;Target=FBgn0015000.1 1 128 +
ChrX	stalkie_big_nohaplotig	exon	27424524	27424674	99	+	.	Parent=FBgn0015000.1.mrna1;Target=FBgn0015000.1 129 279 +
ChrX	stalkie_big_nohaplotig	exon	27426242	27426398	100	+	.	Parent=FBgn0015000.1.mrna1;Target=FBgn0015000.1 280 436 +
ChrX	stalkie_big_nohaplotig	exon	27426466	27426629	100	+	.	Parent=FBgn0015000.1.mrna1;Target=FBgn0015000.1 437 600 +
ChrX	stalkie_big_nohaplotig	exon	27430418	27430570	100	+	.	Parent=FBgn0015000.1.mrna1;Target=FBgn0015000.1 601 753 +
ChrX	stalkie_big_nohaplotig	exon	27430647	27431051	100	+	.	Parent=FBgn0015000.1.mrna1;Target=FBgn0015000.1 754 1158 +
ChrX	stalkie_big_nohaplotig	CDS	27424330	27424457	.	+	0	Parent=FBgn0015000.1.mrna1;Target=FBgn0015000.1 1 128 +
ChrX	stalkie_big_nohaplotig	CDS	27424524	27424674	.	+	1	Parent=FBgn0015000.1.mrna1;Target=FBgn0015000.1 129 279 +
ChrX	stalkie_big_nohaplotig	CDS	27426242	27426398	.	+	0	Parent=FBgn0015000.1.mrna1;Target=FBgn0015000.1 280 436 +
ChrX	stalkie_big_nohaplotig	CDS	27426466	27426629	.	+	2	Parent=FBgn0015000.1.mrna1;Target=FBgn0015000.1 437 600 +
ChrX	stalkie_big_nohaplotig	CDS	27430418	27430570	.	+	0	Parent=FBgn0015000.1.mrna1;Target=FBgn0015000.1 601 753 +
ChrX	stalkie_big_nohaplotig	CDS	27430647	27431051	.	+	0	Parent=FBgn0015000.1.mrna1;Target=FBgn0015000.1 754 1158 +
ChrX	gffcl	locus	27433045	27435158	.	-	.	ID=RLOC_00001610;geneIDs=FBgn0031652.1.path1;transcripts=FBgn0031652.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27433045	27435158	.	-	.	ID=FBgn0031652.1.mrna1;geneID=FBgn0031652.1.path1;Name=FBgn0031652.1;Dir=sensecoverage=100.0;identity=99.7;matches=972;mismatches=3;indels=0;unknowns=0;locus=RLOC_00001610
ChrX	stalkie_big_nohaplotig	exon	27433045	27433210	99	-	.	Parent=FBgn0031652.1.mrna1;Target=FBgn0031652.1 810 975 +
ChrX	stalkie_big_nohaplotig	exon	27434290	27435056	99	-	.	Parent=FBgn0031652.1.mrna1;Target=FBgn0031652.1 43 809 +
ChrX	stalkie_big_nohaplotig	exon	27435117	27435158	100	-	.	Parent=FBgn0031652.1.mrna1;Target=FBgn0031652.1 1 42 +
ChrX	stalkie_big_nohaplotig	CDS	27433045	27433210	.	-	1	Parent=FBgn0031652.1.mrna1;Target=FBgn0031652.1 810 975 +
ChrX	stalkie_big_nohaplotig	CDS	27434290	27435056	.	-	0	Parent=FBgn0031652.1.mrna1;Target=FBgn0031652.1 43 809 +
ChrX	stalkie_big_nohaplotig	CDS	27435117	27435158	.	-	0	Parent=FBgn0031652.1.mrna1;Target=FBgn0031652.1 1 42 +
ChrX	gffcl	locus	27435992	27440372	.	+	.	ID=RLOC_00001611;geneIDs=FBgn0031655.1.path1;transcripts=FBgn0031655.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27435992	27440372	.	+	.	ID=FBgn0031655.1.mrna1;geneID=FBgn0031655.1.path1;Name=FBgn0031655.1;Dir=sensecoverage=100.0;identity=99.7;matches=2357;mismatches=1;indels=7;unknowns=0;locus=RLOC_00001611
ChrX	stalkie_big_nohaplotig	exon	27435992	27436677	98	+	.	Parent=FBgn0031655.1.mrna1;Target=FBgn0031655.1 1 685 +
ChrX	stalkie_big_nohaplotig	exon	27436738	27436954	100	+	.	Parent=FBgn0031655.1.mrna1;Target=FBgn0031655.1 686 902 +
ChrX	stalkie_big_nohaplotig	exon	27437029	27437163	100	+	.	Parent=FBgn0031655.1.mrna1;Target=FBgn0031655.1 903 1037 +
ChrX	stalkie_big_nohaplotig	exon	27437244	27437599	100	+	.	Parent=FBgn0031655.1.mrna1;Target=FBgn0031655.1 1038 1393 +
ChrX	stalkie_big_nohaplotig	exon	27437658	27437808	100	+	.	Parent=FBgn0031655.1.mrna1;Target=FBgn0031655.1 1394 1544 +
ChrX	stalkie_big_nohaplotig	exon	27438326	27438490	99	+	.	Parent=FBgn0031655.1.mrna1;Target=FBgn0031655.1 1545 1709 +
ChrX	stalkie_big_nohaplotig	exon	27438562	27438712	100	+	.	Parent=FBgn0031655.1.mrna1;Target=FBgn0031655.1 1710 1860 +
ChrX	stalkie_big_nohaplotig	exon	27439718	27439849	100	+	.	Parent=FBgn0031655.1.mrna1;Target=FBgn0031655.1 1861 1992 +
ChrX	stalkie_big_nohaplotig	exon	27439940	27440134	100	+	.	Parent=FBgn0031655.1.mrna1;Target=FBgn0031655.1 1993 2187 +
ChrX	stalkie_big_nohaplotig	exon	27440199	27440372	100	+	.	Parent=FBgn0031655.1.mrna1;Target=FBgn0031655.1 2188 2361 +
ChrX	stalkie_big_nohaplotig	CDS	27436077	27436677	.	+	0	Parent=FBgn0031655.1.mrna1;Target=FBgn0031655.1 85 685 +
ChrX	stalkie_big_nohaplotig	CDS	27436738	27436954	.	+	2	Parent=FBgn0031655.1.mrna1;Target=FBgn0031655.1 686 902 +
ChrX	stalkie_big_nohaplotig	CDS	27437029	27437163	.	+	1	Parent=FBgn0031655.1.mrna1;Target=FBgn0031655.1 903 1037 +
ChrX	stalkie_big_nohaplotig	CDS	27437244	27437599	.	+	1	Parent=FBgn0031655.1.mrna1;Target=FBgn0031655.1 1038 1393 +
ChrX	stalkie_big_nohaplotig	CDS	27437658	27437808	.	+	2	Parent=FBgn0031655.1.mrna1;Target=FBgn0031655.1 1394 1544 +
ChrX	stalkie_big_nohaplotig	CDS	27438326	27438490	.	+	1	Parent=FBgn0031655.1.mrna1;Target=FBgn0031655.1 1545 1709 +
ChrX	stalkie_big_nohaplotig	CDS	27438562	27438712	.	+	1	Parent=FBgn0031655.1.mrna1;Target=FBgn0031655.1 1710 1860 +
ChrX	stalkie_big_nohaplotig	CDS	27439718	27439849	.	+	0	Parent=FBgn0031655.1.mrna1;Target=FBgn0031655.1 1861 1992 +
ChrX	stalkie_big_nohaplotig	CDS	27439940	27440134	.	+	0	Parent=FBgn0031655.1.mrna1;Target=FBgn0031655.1 1993 2187 +
ChrX	stalkie_big_nohaplotig	CDS	27440199	27440372	.	+	0	Parent=FBgn0031655.1.mrna1;Target=FBgn0031655.1 2188 2361 +
ChrX	gffcl	locus	27442744	27455756	.	+	.	ID=RLOC_00001612;geneIDs=FBgn0083960.1.path1;transcripts=FBgn0083960.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27442744	27455756	.	+	.	ID=FBgn0083960.1.mrna1;geneID=FBgn0083960.1.path1;Name=FBgn0083960.1;Dir=sensecoverage=100.0;identity=99.9;matches=5899;mismatches=8;indels=0;unknowns=0;locus=RLOC_00001612
ChrX	stalkie_big_nohaplotig	exon	27442744	27442802	100	+	.	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 1 59 +
ChrX	stalkie_big_nohaplotig	exon	27442863	27443025	100	+	.	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 60 222 +
ChrX	stalkie_big_nohaplotig	exon	27443090	27443857	100	+	.	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 223 990 +
ChrX	stalkie_big_nohaplotig	exon	27443946	27444485	100	+	.	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 991 1530 +
ChrX	stalkie_big_nohaplotig	exon	27444550	27444829	100	+	.	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 1531 1810 +
ChrX	stalkie_big_nohaplotig	exon	27445271	27445490	100	+	.	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 1811 2030 +
ChrX	stalkie_big_nohaplotig	exon	27445551	27446192	100	+	.	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 2031 2672 +
ChrX	stalkie_big_nohaplotig	exon	27447501	27447605	100	+	.	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 2673 2777 +
ChrX	stalkie_big_nohaplotig	exon	27449049	27450355	99	+	.	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 2778 4084 +
ChrX	stalkie_big_nohaplotig	exon	27451103	27451413	100	+	.	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 4085 4395 +
ChrX	stalkie_big_nohaplotig	exon	27451524	27451943	100	+	.	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 4396 4815 +
ChrX	stalkie_big_nohaplotig	exon	27452743	27452967	100	+	.	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 4816 5040 +
ChrX	stalkie_big_nohaplotig	exon	27454890	27455756	99	+	.	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 5041 5907 +
ChrX	stalkie_big_nohaplotig	CDS	27442744	27442802	.	+	0	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 1 59 +
ChrX	stalkie_big_nohaplotig	CDS	27442863	27443025	.	+	1	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 60 222 +
ChrX	stalkie_big_nohaplotig	CDS	27443090	27443857	.	+	0	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 223 990 +
ChrX	stalkie_big_nohaplotig	CDS	27443946	27444485	.	+	0	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 991 1530 +
ChrX	stalkie_big_nohaplotig	CDS	27444550	27444829	.	+	0	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 1531 1810 +
ChrX	stalkie_big_nohaplotig	CDS	27445271	27445490	.	+	2	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 1811 2030 +
ChrX	stalkie_big_nohaplotig	CDS	27445551	27446192	.	+	1	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 2031 2672 +
ChrX	stalkie_big_nohaplotig	CDS	27447501	27447605	.	+	1	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 2673 2777 +
ChrX	stalkie_big_nohaplotig	CDS	27449049	27450355	.	+	1	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 2778 4084 +
ChrX	stalkie_big_nohaplotig	CDS	27451103	27451413	.	+	2	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 4085 4395 +
ChrX	stalkie_big_nohaplotig	CDS	27451524	27451943	.	+	0	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 4396 4815 +
ChrX	stalkie_big_nohaplotig	CDS	27452743	27452967	.	+	0	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 4816 5040 +
ChrX	stalkie_big_nohaplotig	CDS	27454890	27455756	.	+	0	Parent=FBgn0083960.1.mrna1;Target=FBgn0083960.1 5041 5907 +
ChrX	gffcl	locus	27460232	27462959	.	-	.	ID=RLOC_00001613;geneIDs=FBgn0031659.1.path1;transcripts=FBgn0031659.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27460232	27462959	.	-	.	ID=FBgn0031659.1.mrna1;geneID=FBgn0031659.1.path1;Name=FBgn0031659.1;Dir=sensecoverage=100.0;identity=99.9;matches=1781;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001613
ChrX	stalkie_big_nohaplotig	exon	27460232	27461040	100	-	.	Parent=FBgn0031659.1.mrna1;Target=FBgn0031659.1 974 1782 +
ChrX	stalkie_big_nohaplotig	exon	27461987	27462959	99	-	.	Parent=FBgn0031659.1.mrna1;Target=FBgn0031659.1 1 973 +
ChrX	stalkie_big_nohaplotig	CDS	27460232	27461040	.	-	2	Parent=FBgn0031659.1.mrna1;Target=FBgn0031659.1 974 1782 +
ChrX	stalkie_big_nohaplotig	CDS	27461987	27462959	.	-	0	Parent=FBgn0031659.1.mrna1;Target=FBgn0031659.1 1 973 +
ChrX	gffcl	locus	27542298	27574363	.	+	.	ID=RLOC_00001614;geneIDs=FBgn0053543.1.path1;transcripts=FBgn0053543.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27542298	27574363	.	+	.	ID=FBgn0053543.1.mrna1;geneID=FBgn0053543.1.path1;Name=FBgn0053543.1;Dir=sensecoverage=93.1;identity=100.0;matches=1310;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001614
ChrX	stalkie_big_nohaplotig	exon	27542298	27542495	100	+	.	Parent=FBgn0053543.1.mrna1;Target=FBgn0053543.1 98 295 +
ChrX	stalkie_big_nohaplotig	exon	27543902	27544027	100	+	.	Parent=FBgn0053543.1.mrna1;Target=FBgn0053543.1 296 421 +
ChrX	stalkie_big_nohaplotig	exon	27544309	27544440	100	+	.	Parent=FBgn0053543.1.mrna1;Target=FBgn0053543.1 422 553 +
ChrX	stalkie_big_nohaplotig	exon	27552710	27552862	100	+	.	Parent=FBgn0053543.1.mrna1;Target=FBgn0053543.1 554 706 +
ChrX	stalkie_big_nohaplotig	exon	27568109	27568597	100	+	.	Parent=FBgn0053543.1.mrna1;Target=FBgn0053543.1 707 1195 +
ChrX	stalkie_big_nohaplotig	exon	27574152	27574363	100	+	.	Parent=FBgn0053543.1.mrna1;Target=FBgn0053543.1 1196 1407 +
ChrX	stalkie_big_nohaplotig	CDS	27542300	27542495	.	+	0	Parent=FBgn0053543.1.mrna1;Target=FBgn0053543.1 100 295 +
ChrX	stalkie_big_nohaplotig	CDS	27543902	27544027	.	+	2	Parent=FBgn0053543.1.mrna1;Target=FBgn0053543.1 296 421 +
ChrX	stalkie_big_nohaplotig	CDS	27544309	27544440	.	+	2	Parent=FBgn0053543.1.mrna1;Target=FBgn0053543.1 422 553 +
ChrX	stalkie_big_nohaplotig	CDS	27552710	27552862	.	+	2	Parent=FBgn0053543.1.mrna1;Target=FBgn0053543.1 554 706 +
ChrX	stalkie_big_nohaplotig	CDS	27568109	27568597	.	+	2	Parent=FBgn0053543.1.mrna1;Target=FBgn0053543.1 707 1195 +
ChrX	stalkie_big_nohaplotig	CDS	27574152	27574363	.	+	2	Parent=FBgn0053543.1.mrna1;Target=FBgn0053543.1 1196 1407 +
ChrX	gffcl	locus	27669795	27672785	.	-	.	ID=RLOC_00001615;geneIDs=comp157777_c1_seq1.path1;transcripts=comp157777_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27669795	27672785	.	-	.	ID=comp157777_c1_seq1.mrna1;geneID=comp157777_c1_seq1.path1;Name=comp157777_c1_seq1;Dir=sensecoverage=98.9;identity=97.4;matches=590;mismatches=12;indels=4;unknowns=0;locus=RLOC_00001615
ChrX	stalkie_big_nohaplotig	exon	27669795	27669896	88	-	.	Parent=comp157777_c1_seq1.mrna1;Target=comp157777_c1_seq1 508 611 +
ChrX	stalkie_big_nohaplotig	exon	27670436	27670906	99	-	.	Parent=comp157777_c1_seq1.mrna1;Target=comp157777_c1_seq1 37 507 +
ChrX	stalkie_big_nohaplotig	exon	27672756	27672785	100	-	.	Parent=comp157777_c1_seq1.mrna1;Target=comp157777_c1_seq1 7 36 +
ChrX	stalkie_big_nohaplotig	CDS	27670497	27670906	.	-	2	Parent=comp157777_c1_seq1.mrna1;Target=comp157777_c1_seq1 37 446 +
ChrX	stalkie_big_nohaplotig	CDS	27672756	27672783	.	-	0	Parent=comp157777_c1_seq1.mrna1;Target=comp157777_c1_seq1 9 36 +
ChrX	gffcl	locus	27685494	27685685	.	+	.	ID=RLOC_00001617;geneIDs=comp118851_c0_seq1.path1;transcripts=comp118851_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27685494	27685685	.	+	.	ID=comp118851_c0_seq1.mrna1;geneID=comp118851_c0_seq1.path1;Name=comp118851_c0_seq1;Dir=indeterminatecoverage=92.3;identity=99.0;matches=191;mismatches=1;indels=1;unknowns=0;Target=comp118851_c0_seq1 193 1 .;CDS_Target=comp118851_c0_seq1 33 1 .;locus=RLOC_00001617
ChrX	stalkie_big_nohaplotig	exon	27685494	27685685	98	+	.	Parent=comp118851_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	27685494	27685525	.	+	0	Parent=comp118851_c0_seq1.mrna1
ChrX	gffcl	locus	27686043	27694668	.	.	.	ID=RLOC_00001618;geneIDs=FBgn0031449.1.path1,comp74181_c0_seq1.path1;transcripts=FBgn0031449.1.mrna1,comp74181_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27686043	27694668	.	-	.	ID=FBgn0031449.1.mrna1;geneID=FBgn0031449.1.path1;Name=FBgn0031449.1;Dir=sensecoverage=92.1;identity=99.8;matches=1723;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001618
ChrX	stalkie_big_nohaplotig	exon	27686043	27686175	100	-	.	Parent=FBgn0031449.1.mrna1;Target=FBgn0031449.1 1743 1875 +
ChrX	stalkie_big_nohaplotig	exon	27686268	27686476	98	-	.	Parent=FBgn0031449.1.mrna1;Target=FBgn0031449.1 1534 1742 +
ChrX	stalkie_big_nohaplotig	exon	27686939	27687094	100	-	.	Parent=FBgn0031449.1.mrna1;Target=FBgn0031449.1 1378 1533 +
ChrX	stalkie_big_nohaplotig	exon	27687183	27687283	100	-	.	Parent=FBgn0031449.1.mrna1;Target=FBgn0031449.1 1277 1377 +
ChrX	stalkie_big_nohaplotig	exon	27687356	27687524	99	-	.	Parent=FBgn0031449.1.mrna1;Target=FBgn0031449.1 1108 1276 +
ChrX	stalkie_big_nohaplotig	exon	27689285	27689559	100	-	.	Parent=FBgn0031449.1.mrna1;Target=FBgn0031449.1 833 1107 +
ChrX	stalkie_big_nohaplotig	exon	27692124	27692362	100	-	.	Parent=FBgn0031449.1.mrna1;Target=FBgn0031449.1 594 832 +
ChrX	stalkie_big_nohaplotig	exon	27692439	27692584	100	-	.	Parent=FBgn0031449.1.mrna1;Target=FBgn0031449.1 448 593 +
ChrX	stalkie_big_nohaplotig	exon	27692727	27692907	100	-	.	Parent=FBgn0031449.1.mrna1;Target=FBgn0031449.1 267 447 +
ChrX	stalkie_big_nohaplotig	exon	27694551	27694668	100	-	.	Parent=FBgn0031449.1.mrna1;Target=FBgn0031449.1 149 266 +
ChrX	stalkie_big_nohaplotig	CDS	27686043	27686175	.	-	1	Parent=FBgn0031449.1.mrna1;Target=FBgn0031449.1 1743 1875 +
ChrX	stalkie_big_nohaplotig	CDS	27686268	27686476	.	-	0	Parent=FBgn0031449.1.mrna1;Target=FBgn0031449.1 1534 1742 +
ChrX	stalkie_big_nohaplotig	CDS	27686939	27687094	.	-	0	Parent=FBgn0031449.1.mrna1;Target=FBgn0031449.1 1378 1533 +
ChrX	stalkie_big_nohaplotig	CDS	27687183	27687283	.	-	2	Parent=FBgn0031449.1.mrna1;Target=FBgn0031449.1 1277 1377 +
ChrX	stalkie_big_nohaplotig	CDS	27687356	27687524	.	-	0	Parent=FBgn0031449.1.mrna1;Target=FBgn0031449.1 1108 1276 +
ChrX	stalkie_big_nohaplotig	CDS	27689285	27689559	.	-	2	Parent=FBgn0031449.1.mrna1;Target=FBgn0031449.1 833 1107 +
ChrX	stalkie_big_nohaplotig	CDS	27692124	27692362	.	-	1	Parent=FBgn0031449.1.mrna1;Target=FBgn0031449.1 594 832 +
ChrX	stalkie_big_nohaplotig	CDS	27692439	27692584	.	-	0	Parent=FBgn0031449.1.mrna1;Target=FBgn0031449.1 448 593 +
ChrX	stalkie_big_nohaplotig	CDS	27692727	27692907	.	-	1	Parent=FBgn0031449.1.mrna1;Target=FBgn0031449.1 267 447 +
ChrX	stalkie_big_nohaplotig	CDS	27694551	27694666	.	-	0	Parent=FBgn0031449.1.mrna1;Target=FBgn0031449.1 151 266 +
ChrX	stalkie_big_nohaplotig	mRNA	27689536	27689880	.	+	.	ID=comp74181_c0_seq1.mrna1;geneID=comp74181_c0_seq1.path1;Name=comp74181_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=341;mismatches=4;indels=3;unknowns=0;Target=comp74181_c0_seq1 348 1 .;CDS_Target=comp74181_c0_seq1 96 1 .;locus=RLOC_00001618
ChrX	stalkie_big_nohaplotig	exon	27689536	27689880	97	+	.	Parent=comp74181_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	27689536	27689628	.	+	0	Parent=comp74181_c0_seq1.mrna1
ChrX	gffcl	locus	27690012	27690741	.	+	.	ID=RLOC_00001619;geneIDs=comp154629_c0_seq1.path1;transcripts=comp154629_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27690012	27690741	.	+	.	ID=comp154629_c0_seq1.mrna1;geneID=comp154629_c0_seq1.path1;Name=comp154629_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.7;matches=725;mismatches=5;indels=44;unknowns=0;Target=comp154629_c0_seq1 774 1 .;CDS_Target=comp154629_c0_seq1 63 1 .;locus=RLOC_00001619
ChrX	stalkie_big_nohaplotig	exon	27690012	27690741	93	+	.	Parent=comp154629_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	27690012	27690074	.	+	0	Parent=comp154629_c0_seq1.mrna1
ChrX	gffcl	locus	27770107	27776538	.	+	.	ID=RLOC_00001620;geneIDs=FBgn0026479.1.path1;transcripts=FBgn0026479.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27770107	27776538	.	+	.	ID=FBgn0026479.1.mrna1;geneID=FBgn0026479.1.path1;Name=FBgn0026479.1;Dir=sensecoverage=100.0;identity=99.8;matches=1692;mismatches=3;indels=0;unknowns=0;locus=RLOC_00001620
ChrX	stalkie_big_nohaplotig	exon	27770107	27770238	100	+	.	Parent=FBgn0026479.1.mrna1;Target=FBgn0026479.1 1 132 +
ChrX	stalkie_big_nohaplotig	exon	27774718	27774862	100	+	.	Parent=FBgn0026479.1.mrna1;Target=FBgn0026479.1 133 277 +
ChrX	stalkie_big_nohaplotig	exon	27774927	27775591	99	+	.	Parent=FBgn0026479.1.mrna1;Target=FBgn0026479.1 278 942 +
ChrX	stalkie_big_nohaplotig	exon	27775714	27776165	99	+	.	Parent=FBgn0026479.1.mrna1;Target=FBgn0026479.1 943 1394 +
ChrX	stalkie_big_nohaplotig	exon	27776238	27776538	99	+	.	Parent=FBgn0026479.1.mrna1;Target=FBgn0026479.1 1395 1695 +
ChrX	stalkie_big_nohaplotig	CDS	27770107	27770238	.	+	0	Parent=FBgn0026479.1.mrna1;Target=FBgn0026479.1 1 132 +
ChrX	stalkie_big_nohaplotig	CDS	27774718	27774862	.	+	0	Parent=FBgn0026479.1.mrna1;Target=FBgn0026479.1 133 277 +
ChrX	stalkie_big_nohaplotig	CDS	27774927	27775591	.	+	2	Parent=FBgn0026479.1.mrna1;Target=FBgn0026479.1 278 942 +
ChrX	stalkie_big_nohaplotig	CDS	27775714	27776165	.	+	0	Parent=FBgn0026479.1.mrna1;Target=FBgn0026479.1 943 1394 +
ChrX	stalkie_big_nohaplotig	CDS	27776238	27776538	.	+	1	Parent=FBgn0026479.1.mrna1;Target=FBgn0026479.1 1395 1695 +
ChrX	gffcl	locus	27782047	27782899	.	+	.	ID=RLOC_00001621;geneIDs=comp150249_c0_seq1.path1;transcripts=comp150249_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27782047	27782899	.	+	.	ID=comp150249_c0_seq1.mrna1;geneID=comp150249_c0_seq1.path1;Name=comp150249_c0_seq1;Dir=indeterminatecoverage=99.9;identity=94.1;matches=830;mismatches=23;indels=29;unknowns=0;Target=comp150249_c0_seq1 883 2 .;CDS_Target=comp150249_c0_seq1 438 301 .;locus=RLOC_00001621
ChrX	stalkie_big_nohaplotig	exon	27782047	27782899	94	+	.	Parent=comp150249_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	27782346	27782483	.	+	0	Parent=comp150249_c0_seq1.mrna1
ChrX	gffcl	locus	27784385	27784920	.	-	.	ID=RLOC_00001622;geneIDs=FBgn0031437.1.path1;transcripts=FBgn0031437.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27784385	27784920	.	-	.	ID=FBgn0031437.1.mrna1;geneID=FBgn0031437.1.path1;Name=FBgn0031437.1;Dir=sensecoverage=100.0;identity=100.0;matches=471;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001622
ChrX	stalkie_big_nohaplotig	exon	27784385	27784624	100	-	.	Parent=FBgn0031437.1.mrna1;Target=FBgn0031437.1 232 471 +
ChrX	stalkie_big_nohaplotig	exon	27784690	27784920	100	-	.	Parent=FBgn0031437.1.mrna1;Target=FBgn0031437.1 1 231 +
ChrX	stalkie_big_nohaplotig	CDS	27784385	27784624	.	-	0	Parent=FBgn0031437.1.mrna1;Target=FBgn0031437.1 232 471 +
ChrX	stalkie_big_nohaplotig	CDS	27784690	27784920	.	-	0	Parent=FBgn0031437.1.mrna1;Target=FBgn0031437.1 1 231 +
ChrX	gffcl	locus	27785422	27787259	.	+	.	ID=RLOC_00001623;geneIDs=FBgn0031436.2.path1,comp152577_c0_seq1.path1;transcripts=FBgn0031436.2.mrna1,comp152577_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27785422	27785991	.	+	.	ID=FBgn0031436.2.mrna1;geneID=FBgn0031436.2.path1;Name=FBgn0031436.2;Dir=sensecoverage=84.3;identity=95.0;matches=363;mismatches=19;indels=0;unknowns=0;locus=RLOC_00001623
ChrX	stalkie_big_nohaplotig	exon	27785422	27785540	100	+	.	Parent=FBgn0031436.2.mrna1;Target=FBgn0031436.2 1 119 +
ChrX	stalkie_big_nohaplotig	exon	27785642	27785819	100	+	.	Parent=FBgn0031436.2.mrna1;Target=FBgn0031436.2 120 297 +
ChrX	stalkie_big_nohaplotig	exon	27785907	27785991	77	+	.	Parent=FBgn0031436.2.mrna1;Target=FBgn0031436.2 298 382 +
ChrX	stalkie_big_nohaplotig	CDS	27785422	27785540	.	+	0	Parent=FBgn0031436.2.mrna1;Target=FBgn0031436.2 1 119 +
ChrX	stalkie_big_nohaplotig	CDS	27785642	27785819	.	+	1	Parent=FBgn0031436.2.mrna1;Target=FBgn0031436.2 120 297 +
ChrX	stalkie_big_nohaplotig	CDS	27785907	27785991	.	+	0	Parent=FBgn0031436.2.mrna1;Target=FBgn0031436.2 298 382 +
ChrX	stalkie_big_nohaplotig	mRNA	27785968	27787259	.	+	.	ID=comp152577_c0_seq1.mrna1;geneID=comp152577_c0_seq1.path1;Name=comp152577_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.9;matches=829;mismatches=24;indels=30;unknowns=0;Target=comp152577_c0_seq1 93 1 .;locus=RLOC_00001623
ChrX	stalkie_big_nohaplotig	exon	27785968	27786238	90	+	.	Parent=comp152577_c0_seq1.mrna1;Target=comp152577_c0_seq1 251 1 .
ChrX	stalkie_big_nohaplotig	exon	27786621	27786765	98	+	.	Parent=comp152577_c0_seq1.mrna1;Target=comp152577_c0_seq1 396 252 .
ChrX	stalkie_big_nohaplotig	exon	27786800	27787259	94	+	.	Parent=comp152577_c0_seq1.mrna1;Target=comp152577_c0_seq1 878 415 .
ChrX	stalkie_big_nohaplotig	CDS	27785968	27786060	.	+	0	Parent=comp152577_c0_seq1.mrna1
ChrX	gffcl	locus	27791938	27794178	.	-	.	ID=RLOC_00001625;geneIDs=ORF255.path1;transcripts=ORF255.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27791938	27794178	.	-	.	ID=ORF255.mrna1;geneID=ORF255.path1;Name=ORF255;Dir=indeterminatecoverage=100.0;identity=99.3;matches=2225;mismatches=16;indels=0;unknowns=0;Target=ORF255 2241 1 .;locus=RLOC_00001625
ChrX	stalkie_big_nohaplotig	exon	27791938	27794178	99	-	.	Parent=ORF255.mrna1
ChrX	stalkie_big_nohaplotig	CDS	27791938	27794178	.	-	0	Parent=ORF255.mrna1
ChrX	gffcl	locus	27796611	27796889	.	-	.	ID=RLOC_00001626;geneIDs=comp51858_c0_seq1.path2;transcripts=comp51858_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	27796611	27796889	.	-	.	ID=comp51858_c0_seq1.mrna2;geneID=comp51858_c0_seq1.path2;Name=comp51858_c0_seq1;Dir=indeterminatecoverage=81.8;identity=100.0;matches=279;mismatches=0;indels=0;unknowns=0;Target=comp51858_c0_seq1 341 63 .;CDS_Target=comp51858_c0_seq1 176 84 .;locus=RLOC_00001626
ChrX	stalkie_big_nohaplotig	exon	27796611	27796889	100	-	.	Parent=comp51858_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	27796776	27796868	.	-	0	Parent=comp51858_c0_seq1.mrna2
ChrX	gffcl	locus	27797191	27802183	.	-	.	ID=RLOC_00001627;geneIDs=ORF132.path1;transcripts=ORF132.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27797191	27802183	.	-	.	ID=ORF132.mrna1;geneID=ORF132.path1;Name=ORF132;Dir=sensecoverage=100.0;identity=99.3;matches=2834;mismatches=4;indels=15;unknowns=0;locus=RLOC_00001627
ChrX	stalkie_big_nohaplotig	exon	27797191	27797283	100	-	.	Parent=ORF132.mrna1;Target=ORF132 2761 2853 +
ChrX	stalkie_big_nohaplotig	exon	27797355	27797639	99	-	.	Parent=ORF132.mrna1;Target=ORF132 2476 2760 +
ChrX	stalkie_big_nohaplotig	exon	27797704	27797991	100	-	.	Parent=ORF132.mrna1;Target=ORF132 2188 2475 +
ChrX	stalkie_big_nohaplotig	exon	27800012	27802183	99	-	.	Parent=ORF132.mrna1;Target=ORF132 1 2187 +
ChrX	stalkie_big_nohaplotig	CDS	27797191	27797283	.	-	0	Parent=ORF132.mrna1;Target=ORF132 2761 2853 +
ChrX	stalkie_big_nohaplotig	CDS	27797355	27797639	.	-	0	Parent=ORF132.mrna1;Target=ORF132 2476 2760 +
ChrX	stalkie_big_nohaplotig	CDS	27797704	27797991	.	-	0	Parent=ORF132.mrna1;Target=ORF132 2188 2475 +
ChrX	stalkie_big_nohaplotig	CDS	27800012	27802183	.	-	0	Parent=ORF132.mrna1;Target=ORF132 1 2187 +
ChrX	gffcl	locus	27802241	27802949	.	+	.	ID=RLOC_00001628;geneIDs=comp150590_c0_seq1.path1;transcripts=comp150590_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27802241	27802949	.	+	.	ID=comp150590_c0_seq1.mrna1;geneID=comp150590_c0_seq1.path1;Name=comp150590_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=709;mismatches=0;indels=0;unknowns=0;Target=comp150590_c0_seq1 709 1 .;CDS_Target=comp150590_c0_seq1 708 1 .;locus=RLOC_00001628
ChrX	stalkie_big_nohaplotig	exon	27802241	27802949	100	+	.	Parent=comp150590_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	27802241	27802948	.	+	0	Parent=comp150590_c0_seq1.mrna1
ChrX	gffcl	locus	27803561	27803765	.	-	.	ID=RLOC_00001629;geneIDs=comp65030_c0_seq1.path1;transcripts=comp65030_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27803561	27803765	.	-	.	ID=comp65030_c0_seq1.mrna1;geneID=comp65030_c0_seq1.path1;Name=comp65030_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.0;matches=203;mismatches=2;indels=0;unknowns=0;Target=comp65030_c0_seq1 205 1 .;CDS_Target=comp65030_c0_seq1 205 2 .;locus=RLOC_00001629
ChrX	stalkie_big_nohaplotig	exon	27803561	27803765	99	-	.	Parent=comp65030_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	27803561	27803764	.	-	0	Parent=comp65030_c0_seq1.mrna1
ChrX	gffcl	locus	27803865	27804534	.	+	.	ID=RLOC_00001630;geneIDs=comp48212_c0_seq1.path1;transcripts=comp48212_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27803865	27804534	.	+	.	ID=comp48212_c0_seq1.mrna1;geneID=comp48212_c0_seq1.path1;Name=comp48212_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=669;mismatches=1;indels=0;unknowns=0;Target=comp48212_c0_seq1 670 1 .;CDS_Target=comp48212_c0_seq1 221 3 .;locus=RLOC_00001630
ChrX	stalkie_big_nohaplotig	exon	27803865	27804534	99	+	.	Parent=comp48212_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	27803867	27804085	.	+	0	Parent=comp48212_c0_seq1.mrna1
ChrX	gffcl	locus	27812085	27816906	.	+	.	ID=RLOC_00001631;geneIDs=FBgn0031434.1.path1;transcripts=FBgn0031434.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27812085	27816906	.	+	.	ID=FBgn0031434.1.mrna1;geneID=FBgn0031434.1.path1;Name=FBgn0031434.1;Dir=sensecoverage=100.0;identity=99.9;matches=1391;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001631
ChrX	stalkie_big_nohaplotig	exon	27812085	27812113	100	+	.	Parent=FBgn0031434.1.mrna1;Target=FBgn0031434.1 1 29 +
ChrX	stalkie_big_nohaplotig	exon	27815544	27816906	99	+	.	Parent=FBgn0031434.1.mrna1;Target=FBgn0031434.1 30 1392 +
ChrX	stalkie_big_nohaplotig	CDS	27812085	27812113	.	+	0	Parent=FBgn0031434.1.mrna1;Target=FBgn0031434.1 1 29 +
ChrX	stalkie_big_nohaplotig	CDS	27815544	27816906	.	+	1	Parent=FBgn0031434.1.mrna1;Target=FBgn0031434.1 30 1392 +
ChrX	gffcl	locus	27818369	27818673	.	-	.	ID=RLOC_00001632;geneIDs=comp69662_c0_seq1.path1;transcripts=comp69662_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27818369	27818673	.	-	.	ID=comp69662_c0_seq1.mrna1;geneID=comp69662_c0_seq1.path1;Name=comp69662_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=305;mismatches=0;indels=0;unknowns=0;Target=comp69662_c0_seq1 305 1 .;CDS_Target=comp69662_c0_seq1 287 3 .;locus=RLOC_00001632
ChrX	stalkie_big_nohaplotig	exon	27818369	27818673	100	-	.	Parent=comp69662_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	27818387	27818671	.	-	0	Parent=comp69662_c0_seq1.mrna1
ChrX	gffcl	locus	27826207	27834082	.	+	.	ID=RLOC_00001633;geneIDs=FBgn0031683.1.path1;transcripts=FBgn0031683.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27826207	27834082	.	+	.	ID=FBgn0031683.1.mrna1;geneID=FBgn0031683.1.path1;Name=FBgn0031683.1;Dir=sensecoverage=100.0;identity=99.8;matches=922;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001633
ChrX	stalkie_big_nohaplotig	exon	27826207	27826277	100	+	.	Parent=FBgn0031683.1.mrna1;Target=FBgn0031683.1 1 71 +
ChrX	stalkie_big_nohaplotig	exon	27829880	27830058	99	+	.	Parent=FBgn0031683.1.mrna1;Target=FBgn0031683.1 72 250 +
ChrX	stalkie_big_nohaplotig	exon	27830142	27830268	100	+	.	Parent=FBgn0031683.1.mrna1;Target=FBgn0031683.1 251 377 +
ChrX	stalkie_big_nohaplotig	exon	27831743	27832019	99	+	.	Parent=FBgn0031683.1.mrna1;Target=FBgn0031683.1 378 654 +
ChrX	stalkie_big_nohaplotig	exon	27833813	27834082	100	+	.	Parent=FBgn0031683.1.mrna1;Target=FBgn0031683.1 655 924 +
ChrX	stalkie_big_nohaplotig	CDS	27826207	27826277	.	+	0	Parent=FBgn0031683.1.mrna1;Target=FBgn0031683.1 1 71 +
ChrX	stalkie_big_nohaplotig	CDS	27829880	27830058	.	+	1	Parent=FBgn0031683.1.mrna1;Target=FBgn0031683.1 72 250 +
ChrX	stalkie_big_nohaplotig	CDS	27830142	27830268	.	+	2	Parent=FBgn0031683.1.mrna1;Target=FBgn0031683.1 251 377 +
ChrX	stalkie_big_nohaplotig	CDS	27831743	27832019	.	+	1	Parent=FBgn0031683.1.mrna1;Target=FBgn0031683.1 378 654 +
ChrX	stalkie_big_nohaplotig	CDS	27833813	27834082	.	+	0	Parent=FBgn0031683.1.mrna1;Target=FBgn0031683.1 655 924 +
ChrX	gffcl	locus	27835922	27838001	.	-	.	ID=RLOC_00001634;geneIDs=FBgn0031684.1.path1;transcripts=FBgn0031684.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27835922	27838001	.	-	.	ID=FBgn0031684.1.mrna1;geneID=FBgn0031684.1.path1;Name=FBgn0031684.1;Dir=sensecoverage=100.0;identity=100.0;matches=381;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001634
ChrX	stalkie_big_nohaplotig	exon	27835922	27835987	100	-	.	Parent=FBgn0031684.1.mrna1;Target=FBgn0031684.1 316 381 +
ChrX	stalkie_big_nohaplotig	exon	27837577	27837753	100	-	.	Parent=FBgn0031684.1.mrna1;Target=FBgn0031684.1 139 315 +
ChrX	stalkie_big_nohaplotig	exon	27837864	27838001	100	-	.	Parent=FBgn0031684.1.mrna1;Target=FBgn0031684.1 1 138 +
ChrX	stalkie_big_nohaplotig	CDS	27835922	27835987	.	-	0	Parent=FBgn0031684.1.mrna1;Target=FBgn0031684.1 316 381 +
ChrX	stalkie_big_nohaplotig	CDS	27837577	27837753	.	-	0	Parent=FBgn0031684.1.mrna1;Target=FBgn0031684.1 139 315 +
ChrX	stalkie_big_nohaplotig	CDS	27837864	27838001	.	-	0	Parent=FBgn0031684.1.mrna1;Target=FBgn0031684.1 1 138 +
ChrX	gffcl	locus	27839317	27839562	.	+	.	ID=RLOC_00001635;geneIDs=comp144171_c0_seq1.path1;transcripts=comp144171_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27839317	27839562	.	+	.	ID=comp144171_c0_seq1.mrna1;geneID=comp144171_c0_seq1.path1;Name=comp144171_c0_seq1;Dir=indeterminatecoverage=21.0;identity=100.0;matches=246;mismatches=0;indels=0;unknowns=0;Target=comp144171_c0_seq1 599 354 .;locus=RLOC_00001635
ChrX	stalkie_big_nohaplotig	exon	27839317	27839562	100	+	.	Parent=comp144171_c0_seq1.mrna1
ChrX	gffcl	locus	27839903	27847636	.	-	.	ID=RLOC_00001636;geneIDs=FBgn0031534.1.path1;transcripts=FBgn0031534.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27839903	27847636	.	-	.	ID=FBgn0031534.1.mrna1;geneID=FBgn0031534.1.path1;Name=FBgn0031534.1;Dir=sensecoverage=100.0;identity=99.9;matches=1412;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001636
ChrX	stalkie_big_nohaplotig	exon	27839903	27839950	100	-	.	Parent=FBgn0031534.1.mrna1;Target=FBgn0031534.1 1366 1413 +
ChrX	stalkie_big_nohaplotig	exon	27840016	27840168	100	-	.	Parent=FBgn0031534.1.mrna1;Target=FBgn0031534.1 1213 1365 +
ChrX	stalkie_big_nohaplotig	exon	27841290	27841733	99	-	.	Parent=FBgn0031534.1.mrna1;Target=FBgn0031534.1 769 1212 +
ChrX	stalkie_big_nohaplotig	exon	27841927	27842043	100	-	.	Parent=FBgn0031534.1.mrna1;Target=FBgn0031534.1 652 768 +
ChrX	stalkie_big_nohaplotig	exon	27842111	27842280	100	-	.	Parent=FBgn0031534.1.mrna1;Target=FBgn0031534.1 482 651 +
ChrX	stalkie_big_nohaplotig	exon	27843383	27843537	100	-	.	Parent=FBgn0031534.1.mrna1;Target=FBgn0031534.1 327 481 +
ChrX	stalkie_big_nohaplotig	exon	27844741	27844862	100	-	.	Parent=FBgn0031534.1.mrna1;Target=FBgn0031534.1 205 326 +
ChrX	stalkie_big_nohaplotig	exon	27847433	27847636	100	-	.	Parent=FBgn0031534.1.mrna1;Target=FBgn0031534.1 1 204 +
ChrX	stalkie_big_nohaplotig	CDS	27839903	27839950	.	-	0	Parent=FBgn0031534.1.mrna1;Target=FBgn0031534.1 1366 1413 +
ChrX	stalkie_big_nohaplotig	CDS	27840016	27840168	.	-	0	Parent=FBgn0031534.1.mrna1;Target=FBgn0031534.1 1213 1365 +
ChrX	stalkie_big_nohaplotig	CDS	27841290	27841733	.	-	0	Parent=FBgn0031534.1.mrna1;Target=FBgn0031534.1 769 1212 +
ChrX	stalkie_big_nohaplotig	CDS	27841927	27842043	.	-	0	Parent=FBgn0031534.1.mrna1;Target=FBgn0031534.1 652 768 +
ChrX	stalkie_big_nohaplotig	CDS	27842111	27842280	.	-	2	Parent=FBgn0031534.1.mrna1;Target=FBgn0031534.1 482 651 +
ChrX	stalkie_big_nohaplotig	CDS	27843383	27843537	.	-	1	Parent=FBgn0031534.1.mrna1;Target=FBgn0031534.1 327 481 +
ChrX	stalkie_big_nohaplotig	CDS	27844741	27844862	.	-	0	Parent=FBgn0031534.1.mrna1;Target=FBgn0031534.1 205 326 +
ChrX	stalkie_big_nohaplotig	CDS	27847433	27847636	.	-	0	Parent=FBgn0031534.1.mrna1;Target=FBgn0031534.1 1 204 +
ChrX	gffcl	locus	27928122	27948676	.	+	.	ID=RLOC_00001637;geneIDs=FBgn0031629.1.path1;transcripts=FBgn0031629.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27928122	27948676	.	+	.	ID=FBgn0031629.1.mrna1;geneID=FBgn0031629.1.path1;Name=FBgn0031629.1;Dir=sensecoverage=100.0;identity=99.9;matches=722;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001637
ChrX	stalkie_big_nohaplotig	exon	27928122	27928139	100	+	.	Parent=FBgn0031629.1.mrna1;Target=FBgn0031629.1 1 18 +
ChrX	stalkie_big_nohaplotig	exon	27936462	27936606	100	+	.	Parent=FBgn0031629.1.mrna1;Target=FBgn0031629.1 19 163 +
ChrX	stalkie_big_nohaplotig	exon	27948117	27948676	99	+	.	Parent=FBgn0031629.1.mrna1;Target=FBgn0031629.1 164 723 +
ChrX	stalkie_big_nohaplotig	CDS	27928122	27928139	.	+	0	Parent=FBgn0031629.1.mrna1;Target=FBgn0031629.1 1 18 +
ChrX	stalkie_big_nohaplotig	CDS	27936462	27936606	.	+	0	Parent=FBgn0031629.1.mrna1;Target=FBgn0031629.1 19 163 +
ChrX	stalkie_big_nohaplotig	CDS	27948117	27948676	.	+	2	Parent=FBgn0031629.1.mrna1;Target=FBgn0031629.1 164 723 +
ChrX	gffcl	locus	27950678	27952843	.	-	.	ID=RLOC_00001638;geneIDs=FBgn0031628.1.path1,comp160919_c1_seq1.path1;transcripts=comp160919_c1_seq1.mrna1,FBgn0031628.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27950678	27952843	.	-	.	ID=comp160919_c1_seq1.mrna1;geneID=comp160919_c1_seq1.path1;Name=comp160919_c1_seq1;Dir=antisensecoverage=100.0;identity=99.0;matches=1752;mismatches=17;indels=1;unknowns=0;locus=RLOC_00001638
ChrX	stalkie_big_nohaplotig	exon	27950678	27951190	98	-	.	Parent=comp160919_c1_seq1.mrna1;Target=comp160919_c1_seq1 1 512 -
ChrX	stalkie_big_nohaplotig	exon	27951259	27951424	100	-	.	Parent=comp160919_c1_seq1.mrna1;Target=comp160919_c1_seq1 513 678 -
ChrX	stalkie_big_nohaplotig	exon	27951558	27951683	99	-	.	Parent=comp160919_c1_seq1.mrna1;Target=comp160919_c1_seq1 679 804 -
ChrX	stalkie_big_nohaplotig	exon	27951746	27952448	99	-	.	Parent=comp160919_c1_seq1.mrna1;Target=comp160919_c1_seq1 805 1507 -
ChrX	stalkie_big_nohaplotig	exon	27952508	27952618	99	-	.	Parent=comp160919_c1_seq1.mrna1;Target=comp160919_c1_seq1 1508 1618 -
ChrX	stalkie_big_nohaplotig	exon	27952693	27952843	98	-	.	Parent=comp160919_c1_seq1.mrna1;Target=comp160919_c1_seq1 1619 1769 -
ChrX	stalkie_big_nohaplotig	CDS	27951566	27951683	.	-	1	Parent=comp160919_c1_seq1.mrna1;Target=comp160919_c1_seq1 687 804 .
ChrX	stalkie_big_nohaplotig	CDS	27951746	27952448	.	-	2	Parent=comp160919_c1_seq1.mrna1;Target=comp160919_c1_seq1 805 1507 .
ChrX	stalkie_big_nohaplotig	CDS	27952508	27952618	.	-	2	Parent=comp160919_c1_seq1.mrna1;Target=comp160919_c1_seq1 1508 1618 .
ChrX	stalkie_big_nohaplotig	CDS	27952693	27952714	.	-	0	Parent=comp160919_c1_seq1.mrna1;Target=comp160919_c1_seq1 1619 1640 .
ChrX	stalkie_big_nohaplotig	mRNA	27950821	27952766	.	-	.	ID=FBgn0031628.1.mrna1;geneID=FBgn0031628.1.path1;Name=FBgn0031628.1;Dir=sensecoverage=99.9;identity=99.1;matches=1514;mismatches=14;indels=0;unknowns=0;locus=RLOC_00001638
ChrX	stalkie_big_nohaplotig	exon	27950821	27951190	98	-	.	Parent=FBgn0031628.1.mrna1;Target=FBgn0031628.1 1161 1530 +
ChrX	stalkie_big_nohaplotig	exon	27951259	27951424	100	-	.	Parent=FBgn0031628.1.mrna1;Target=FBgn0031628.1 995 1160 +
ChrX	stalkie_big_nohaplotig	exon	27951580	27951683	99	-	.	Parent=FBgn0031628.1.mrna1;Target=FBgn0031628.1 891 994 +
ChrX	stalkie_big_nohaplotig	exon	27951746	27952448	99	-	.	Parent=FBgn0031628.1.mrna1;Target=FBgn0031628.1 188 890 +
ChrX	stalkie_big_nohaplotig	exon	27952508	27952618	99	-	.	Parent=FBgn0031628.1.mrna1;Target=FBgn0031628.1 77 187 +
ChrX	stalkie_big_nohaplotig	exon	27952693	27952766	98	-	.	Parent=FBgn0031628.1.mrna1;Target=FBgn0031628.1 3 76 +
ChrX	stalkie_big_nohaplotig	CDS	27950821	27951190	.	-	1	Parent=FBgn0031628.1.mrna1;Target=FBgn0031628.1 1161 1530 +
ChrX	stalkie_big_nohaplotig	CDS	27951259	27951424	.	-	2	Parent=FBgn0031628.1.mrna1;Target=FBgn0031628.1 995 1160 +
ChrX	stalkie_big_nohaplotig	CDS	27951580	27951683	.	-	1	Parent=FBgn0031628.1.mrna1;Target=FBgn0031628.1 891 994 +
ChrX	stalkie_big_nohaplotig	CDS	27951746	27952448	.	-	2	Parent=FBgn0031628.1.mrna1;Target=FBgn0031628.1 188 890 +
ChrX	stalkie_big_nohaplotig	CDS	27952508	27952618	.	-	2	Parent=FBgn0031628.1.mrna1;Target=FBgn0031628.1 77 187 +
ChrX	stalkie_big_nohaplotig	CDS	27952693	27952765	.	-	0	Parent=FBgn0031628.1.mrna1;Target=FBgn0031628.1 4 76 +
ChrX	gffcl	locus	27954177	27963426	.	+	.	ID=RLOC_00001639;geneIDs=FBgn0031216.1.path1;transcripts=FBgn0031216.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27954177	27963426	.	+	.	ID=FBgn0031216.1.mrna1;geneID=FBgn0031216.1.path1;Name=FBgn0031216.1;Dir=sensecoverage=100.0;identity=99.8;matches=6182;mismatches=10;indels=0;unknowns=0;locus=RLOC_00001639
ChrX	stalkie_big_nohaplotig	exon	27954177	27954220	100	+	.	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 1 44 +
ChrX	stalkie_big_nohaplotig	exon	27954334	27954421	100	+	.	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 45 132 +
ChrX	stalkie_big_nohaplotig	exon	27954908	27955086	99	+	.	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 133 311 +
ChrX	stalkie_big_nohaplotig	exon	27955407	27956416	99	+	.	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 312 1321 +
ChrX	stalkie_big_nohaplotig	exon	27956474	27956661	100	+	.	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 1322 1509 +
ChrX	stalkie_big_nohaplotig	exon	27956725	27956905	100	+	.	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 1510 1690 +
ChrX	stalkie_big_nohaplotig	exon	27957335	27957953	99	+	.	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 1691 2309 +
ChrX	stalkie_big_nohaplotig	exon	27958025	27958280	100	+	.	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 2310 2565 +
ChrX	stalkie_big_nohaplotig	exon	27958345	27958558	100	+	.	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 2566 2779 +
ChrX	stalkie_big_nohaplotig	exon	27959313	27961096	99	+	.	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 2780 4563 +
ChrX	stalkie_big_nohaplotig	exon	27961168	27962031	100	+	.	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 4564 5427 +
ChrX	stalkie_big_nohaplotig	exon	27962480	27962660	100	+	.	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 5428 5608 +
ChrX	stalkie_big_nohaplotig	exon	27962738	27963287	99	+	.	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 5609 6158 +
ChrX	stalkie_big_nohaplotig	exon	27963393	27963426	100	+	.	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 6159 6192 +
ChrX	stalkie_big_nohaplotig	CDS	27954177	27954220	.	+	0	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 1 44 +
ChrX	stalkie_big_nohaplotig	CDS	27954334	27954421	.	+	1	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 45 132 +
ChrX	stalkie_big_nohaplotig	CDS	27954908	27955086	.	+	0	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 133 311 +
ChrX	stalkie_big_nohaplotig	CDS	27955407	27956416	.	+	1	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 312 1321 +
ChrX	stalkie_big_nohaplotig	CDS	27956474	27956661	.	+	2	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 1322 1509 +
ChrX	stalkie_big_nohaplotig	CDS	27956725	27956905	.	+	0	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 1510 1690 +
ChrX	stalkie_big_nohaplotig	CDS	27957335	27957953	.	+	2	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 1691 2309 +
ChrX	stalkie_big_nohaplotig	CDS	27958025	27958280	.	+	1	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 2310 2565 +
ChrX	stalkie_big_nohaplotig	CDS	27958345	27958558	.	+	0	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 2566 2779 +
ChrX	stalkie_big_nohaplotig	CDS	27959313	27961096	.	+	2	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 2780 4563 +
ChrX	stalkie_big_nohaplotig	CDS	27961168	27962031	.	+	0	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 4564 5427 +
ChrX	stalkie_big_nohaplotig	CDS	27962480	27962660	.	+	0	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 5428 5608 +
ChrX	stalkie_big_nohaplotig	CDS	27962738	27963287	.	+	2	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 5609 6158 +
ChrX	stalkie_big_nohaplotig	CDS	27963393	27963426	.	+	1	Parent=FBgn0031216.1.mrna1;Target=FBgn0031216.1 6159 6192 +
ChrX	gffcl	locus	27967592	27968599	.	.	.	ID=RLOC_00001640;geneIDs=AGAP003812.2.path2,comp161659_c0_seq1.path2;transcripts=comp161659_c0_seq1.mrna2,AGAP003812.2.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	27967592	27968599	.	-	.	ID=comp161659_c0_seq1.mrna2;geneID=comp161659_c0_seq1.path2;Name=comp161659_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1003;mismatches=5;indels=3;unknowns=0;Target=comp161659_c0_seq1 1011 1 .;CDS_Target=comp161659_c0_seq1 186 1 .;locus=RLOC_00001640
ChrX	stalkie_big_nohaplotig	exon	27967592	27968599	99	-	.	Parent=comp161659_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	27968414	27968599	.	-	0	Parent=comp161659_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	27967605	27968597	.	+	.	ID=AGAP003812.2.mrna2;geneID=AGAP003812.2.path2;Name=AGAP003812.2;Dir=sensecoverage=100.0;identity=99.2;matches=934;mismatches=5;indels=3;unknowns=0;Target=AGAP003812.2 3 71 +;locus=RLOC_00001640
ChrX	stalkie_big_nohaplotig	exon	27967605	27967754	98	+	.	Parent=AGAP003812.2.mrna2;Target=AGAP003812.2 1 151 +
ChrX	stalkie_big_nohaplotig	exon	27967809	27968597	99	+	.	Parent=AGAP003812.2.mrna2;Target=AGAP003812.2 152 942 +
ChrX	stalkie_big_nohaplotig	CDS	27967607	27967674	.	+	0	Parent=AGAP003812.2.mrna2
ChrX	gffcl	locus	27971835	27972303	.	+	.	ID=RLOC_00001641;geneIDs=comp153115_c0_seq1.path1;transcripts=comp153115_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27971835	27972303	.	+	.	ID=comp153115_c0_seq1.mrna1;geneID=comp153115_c0_seq1.path1;Name=comp153115_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=469;mismatches=0;indels=0;unknowns=0;Target=comp153115_c0_seq1 469 1 .;CDS_Target=comp153115_c0_seq1 125 3 .;locus=RLOC_00001641
ChrX	stalkie_big_nohaplotig	exon	27971835	27972303	100	+	.	Parent=comp153115_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	27971837	27971959	.	+	0	Parent=comp153115_c0_seq1.mrna1
ChrX	gffcl	locus	27973729	27974175	.	+	.	ID=RLOC_00001642;geneIDs=comp151912_c0_seq1.path1;transcripts=comp151912_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27973729	27974175	.	+	.	ID=comp151912_c0_seq1.mrna1;geneID=comp151912_c0_seq1.path1;Name=comp151912_c0_seq1;Dir=indeterminatecoverage=66.6;identity=98.2;matches=438;mismatches=7;indels=1;unknowns=0;Target=comp151912_c0_seq1 465 370 .;locus=RLOC_00001642
ChrX	stalkie_big_nohaplotig	exon	27973729	27973812	97	+	.	Parent=comp151912_c0_seq1.mrna1;Target=comp151912_c0_seq1 315 232 .
ChrX	stalkie_big_nohaplotig	exon	27973814	27974175	98	+	.	Parent=comp151912_c0_seq1.mrna1;Target=comp151912_c0_seq1 692 332 .
ChrX	stalkie_big_nohaplotig	CDS	27973852	27973948	.	+	0	Parent=comp151912_c0_seq1.mrna1
ChrX	gffcl	locus	27974811	27978486	.	-	.	ID=RLOC_00001643;geneIDs=FBgn0002901.1.path1;transcripts=FBgn0002901.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27974811	27978486	.	-	.	ID=FBgn0002901.1.mrna1;geneID=FBgn0002901.1.path1;Name=FBgn0002901.1;Dir=sensecoverage=100.0;identity=99.9;matches=2268;mismatches=2;indels=1;unknowns=0;Target=FBgn0002901.1 3 59 +;locus=RLOC_00001643
ChrX	stalkie_big_nohaplotig	exon	27974811	27975055	100	-	.	Parent=FBgn0002901.1.mrna1;Target=FBgn0002901.1 2027 2271 +
ChrX	stalkie_big_nohaplotig	exon	27976187	27976366	99	-	.	Parent=FBgn0002901.1.mrna1;Target=FBgn0002901.1 1847 2026 +
ChrX	stalkie_big_nohaplotig	exon	27976449	27976628	100	-	.	Parent=FBgn0002901.1.mrna1;Target=FBgn0002901.1 1667 1846 +
ChrX	stalkie_big_nohaplotig	exon	27976692	27976899	100	-	.	Parent=FBgn0002901.1.mrna1;Target=FBgn0002901.1 1459 1666 +
ChrX	stalkie_big_nohaplotig	exon	27976966	27978144	100	-	.	Parent=FBgn0002901.1.mrna1;Target=FBgn0002901.1 280 1458 +
ChrX	stalkie_big_nohaplotig	exon	27978209	27978486	99	-	.	Parent=FBgn0002901.1.mrna1;Target=FBgn0002901.1 1 279 +
ChrX	stalkie_big_nohaplotig	CDS	27978429	27978484	.	-	0	Parent=FBgn0002901.1.mrna1
ChrX	gffcl	locus	27979695	27980765	.	+	.	ID=RLOC_00001644;geneIDs=FBgn0031657.1.path1;transcripts=FBgn0031657.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27979695	27980765	.	+	.	ID=FBgn0031657.1.mrna1;geneID=FBgn0031657.1.path1;Name=FBgn0031657.1;Dir=sensecoverage=100.0;identity=100.0;matches=1005;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001644
ChrX	stalkie_big_nohaplotig	exon	27979695	27979843	100	+	.	Parent=FBgn0031657.1.mrna1;Target=FBgn0031657.1 1 149 +
ChrX	stalkie_big_nohaplotig	exon	27979910	27980765	100	+	.	Parent=FBgn0031657.1.mrna1;Target=FBgn0031657.1 150 1005 +
ChrX	stalkie_big_nohaplotig	CDS	27979695	27979843	.	+	0	Parent=FBgn0031657.1.mrna1;Target=FBgn0031657.1 1 149 +
ChrX	stalkie_big_nohaplotig	CDS	27979910	27980765	.	+	1	Parent=FBgn0031657.1.mrna1;Target=FBgn0031657.1 150 1005 +
ChrX	gffcl	locus	27980866	27982340	.	+	.	ID=RLOC_00001645;geneIDs=comp152558_c0_seq1.path1;transcripts=comp152558_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27980866	27982340	.	+	.	ID=comp152558_c0_seq1.mrna1;geneID=comp152558_c0_seq1.path1;Name=comp152558_c0_seq1;Dir=sensecoverage=99.9;identity=99.7;matches=1317;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001645
ChrX	stalkie_big_nohaplotig	exon	27980866	27981157	98	+	.	Parent=comp152558_c0_seq1.mrna1;Target=comp152558_c0_seq1 2 293 +
ChrX	stalkie_big_nohaplotig	exon	27981218	27981288	100	+	.	Parent=comp152558_c0_seq1.mrna1;Target=comp152558_c0_seq1 294 364 +
ChrX	stalkie_big_nohaplotig	exon	27981383	27982340	99	+	.	Parent=comp152558_c0_seq1.mrna1;Target=comp152558_c0_seq1 365 1322 +
ChrX	stalkie_big_nohaplotig	CDS	27981139	27981157	.	+	0	Parent=comp152558_c0_seq1.mrna1;Target=comp152558_c0_seq1 275 293 +
ChrX	stalkie_big_nohaplotig	CDS	27981218	27981288	.	+	2	Parent=comp152558_c0_seq1.mrna1;Target=comp152558_c0_seq1 294 364 +
ChrX	stalkie_big_nohaplotig	CDS	27981383	27981748	.	+	0	Parent=comp152558_c0_seq1.mrna1;Target=comp152558_c0_seq1 365 730 +
ChrX	gffcl	locus	27986696	27987972	.	-	.	ID=RLOC_00001646;geneIDs=FBgn0015834.1.path1;transcripts=FBgn0015834.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27986696	27987972	.	-	.	ID=FBgn0015834.1.mrna1;geneID=FBgn0015834.1.path1;Name=FBgn0015834.1;Dir=sensecoverage=100.0;identity=99.9;matches=1001;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001646
ChrX	stalkie_big_nohaplotig	exon	27986696	27987177	100	-	.	Parent=FBgn0015834.1.mrna1;Target=FBgn0015834.1 521 1002 +
ChrX	stalkie_big_nohaplotig	exon	27987248	27987737	99	-	.	Parent=FBgn0015834.1.mrna1;Target=FBgn0015834.1 31 520 +
ChrX	stalkie_big_nohaplotig	exon	27987943	27987972	100	-	.	Parent=FBgn0015834.1.mrna1;Target=FBgn0015834.1 1 30 +
ChrX	stalkie_big_nohaplotig	CDS	27986696	27987177	.	-	2	Parent=FBgn0015834.1.mrna1;Target=FBgn0015834.1 521 1002 +
ChrX	stalkie_big_nohaplotig	CDS	27987248	27987737	.	-	0	Parent=FBgn0015834.1.mrna1;Target=FBgn0015834.1 31 520 +
ChrX	stalkie_big_nohaplotig	CDS	27987943	27987972	.	-	0	Parent=FBgn0015834.1.mrna1;Target=FBgn0015834.1 1 30 +
ChrX	gffcl	locus	27990107	27991087	.	+	.	ID=RLOC_00001647;geneIDs=FBgn0262467.1.path1;transcripts=FBgn0262467.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27990107	27991087	.	+	.	ID=FBgn0262467.1.mrna1;geneID=FBgn0262467.1.path1;Name=FBgn0262467.1;Dir=sensecoverage=100.0;identity=100.0;matches=870;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001647
ChrX	stalkie_big_nohaplotig	exon	27990107	27990617	100	+	.	Parent=FBgn0262467.1.mrna1;Target=FBgn0262467.1 1 511 +
ChrX	stalkie_big_nohaplotig	exon	27990673	27990881	100	+	.	Parent=FBgn0262467.1.mrna1;Target=FBgn0262467.1 512 720 +
ChrX	stalkie_big_nohaplotig	exon	27990938	27991087	100	+	.	Parent=FBgn0262467.1.mrna1;Target=FBgn0262467.1 721 870 +
ChrX	stalkie_big_nohaplotig	CDS	27990107	27990617	.	+	0	Parent=FBgn0262467.1.mrna1;Target=FBgn0262467.1 1 511 +
ChrX	stalkie_big_nohaplotig	CDS	27990673	27990881	.	+	2	Parent=FBgn0262467.1.mrna1;Target=FBgn0262467.1 512 720 +
ChrX	stalkie_big_nohaplotig	CDS	27990938	27991087	.	+	0	Parent=FBgn0262467.1.mrna1;Target=FBgn0262467.1 721 870 +
ChrX	gffcl	locus	27993881	27994196	.	-	.	ID=RLOC_00001648;geneIDs=comp116388_c0_seq1.path1;transcripts=comp116388_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27993881	27994196	.	-	.	ID=comp116388_c0_seq1.mrna1;geneID=comp116388_c0_seq1.path1;Name=comp116388_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=316;mismatches=0;indels=0;unknowns=0;Target=comp116388_c0_seq1 316 1 .;CDS_Target=comp116388_c0_seq1 77 3 .;locus=RLOC_00001648
ChrX	stalkie_big_nohaplotig	exon	27993881	27994196	100	-	.	Parent=comp116388_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	27994120	27994194	.	-	0	Parent=comp116388_c0_seq1.mrna1
ChrX	gffcl	locus	27994212	27995092	.	.	.	ID=RLOC_00001649;geneIDs=comp88953_c0_seq1.path1,comp147180_c0_seq1.path1;transcripts=comp147180_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27994553	27995092	.	+	.	ID=comp147180_c0_seq1.mrna1;geneID=comp147180_c0_seq1.path1;Name=comp147180_c0_seq1;Dir=indeterminatecoverage=98.0;identity=98.7;matches=533;mismatches=7;indels=0;unknowns=0;Target=comp147180_c0_seq1 540 1 .;CDS_Target=comp147180_c0_seq1 270 205 .;locus=RLOC_00001649
ChrX	stalkie_big_nohaplotig	exon	27994553	27995092	98	+	.	Parent=comp147180_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	27994757	27994822	.	+	0	Parent=comp147180_c0_seq1.mrna1
ChrX	gffcl	locus	27998069	27998393	.	-	.	ID=RLOC_00001650;geneIDs=comp149369_c1_seq1.path1;transcripts=comp149369_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	27998069	27998393	.	-	.	ID=comp149369_c1_seq1.mrna1;geneID=comp149369_c1_seq1.path1;Name=comp149369_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=325;mismatches=0;indels=0;unknowns=0;Target=comp149369_c1_seq1 325 1 .;CDS_Target=comp149369_c1_seq1 238 80 .;locus=RLOC_00001650
ChrX	stalkie_big_nohaplotig	exon	27998069	27998393	100	-	.	Parent=comp149369_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	27998156	27998314	.	-	0	Parent=comp149369_c1_seq1.mrna1
ChrX	gffcl	locus	28007173	28007606	.	+	.	ID=RLOC_00001651;geneIDs=comp140813_c0_seq1.path2;transcripts=comp140813_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	28007173	28007606	.	+	.	ID=comp140813_c0_seq1.mrna2;geneID=comp140813_c0_seq1.path2;Name=comp140813_c0_seq1;Dir=indeterminatecoverage=88.3;identity=98.8;matches=429;mismatches=1;indels=4;unknowns=0;Target=comp140813_c0_seq1 479 50 .;CDS_Target=comp140813_c0_seq1 274 197 .;locus=RLOC_00001651
ChrX	stalkie_big_nohaplotig	exon	28007173	28007606	98	+	.	Parent=comp140813_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	28007320	28007397	.	+	0	Parent=comp140813_c0_seq1.mrna2
ChrX	gffcl	locus	28009802	28010569	.	+	.	ID=RLOC_00001652;geneIDs=comp146691_c0_seq1.path1;transcripts=comp146691_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28009802	28010569	.	+	.	ID=comp146691_c0_seq1.mrna1;geneID=comp146691_c0_seq1.path1;Name=comp146691_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.0;matches=715;mismatches=4;indels=50;unknowns=0;Target=comp146691_c0_seq1 720 1 .;CDS_Target=comp146691_c0_seq1 318 94 .;locus=RLOC_00001652
ChrX	stalkie_big_nohaplotig	exon	28009802	28010569	92	+	.	Parent=comp146691_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28009895	28010168	.	+	0	Parent=comp146691_c0_seq1.mrna1
ChrX	gffcl	locus	28012124	28012562	.	-	.	ID=RLOC_00001653;geneIDs=comp150651_c0_seq1.path1;transcripts=comp150651_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28012124	28012562	.	-	.	ID=comp150651_c0_seq1.mrna1;geneID=comp150651_c0_seq1.path1;Name=comp150651_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.7;matches=431;mismatches=8;indels=31;unknowns=0;Target=comp150651_c0_seq1 470 1 .;CDS_Target=comp150651_c0_seq1 240 91 .;locus=RLOC_00001653
ChrX	stalkie_big_nohaplotig	exon	28012124	28012562	91	-	.	Parent=comp150651_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28012347	28012472	.	-	0	Parent=comp150651_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29999533	29999786	.	-	.	ID=comp53312_c0_seq1.mrna1;geneID=comp53312_c0_seq1.path1;Name=comp53312_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=254;mismatches=0;indels=0;unknowns=0;Target=comp53312_c0_seq1 254 1 .;CDS_Target=comp53312_c0_seq1 116 3 .;locus=RLOC_00001655
ChrX	stalkie_big_nohaplotig	exon	29999533	29999786	100	-	.	Parent=comp53312_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29999671	29999784	.	-	0	Parent=comp53312_c0_seq1.mrna1
ChrX	gffcl	locus	28067750	28068186	.	-	.	ID=RLOC_00001656;geneIDs=comp140304_c0_seq1.path1;transcripts=comp140304_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28067750	28068186	.	-	.	ID=comp140304_c0_seq1.mrna1;geneID=comp140304_c0_seq1.path1;Name=comp140304_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=437;mismatches=0;indels=0;unknowns=0;Target=comp140304_c0_seq1 438 2 .;CDS_Target=comp140304_c0_seq1 212 120 .;locus=RLOC_00001656
ChrX	stalkie_big_nohaplotig	exon	28067750	28068186	100	-	.	Parent=comp140304_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28067976	28068068	.	-	0	Parent=comp140304_c0_seq1.mrna1
ChrX	gffcl	locus	28070568	28074362	.	+	.	ID=RLOC_00001657;geneIDs=ORF224.path1;transcripts=ORF224.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28070568	28074362	.	+	.	ID=ORF224.mrna1;geneID=ORF224.path1;Name=ORF224;Dir=sensecoverage=99.1;identity=99.3;matches=2310;mismatches=16;indels=0;unknowns=0;locus=RLOC_00001657
ChrX	stalkie_big_nohaplotig	exon	28070568	28070658	100	+	.	Parent=ORF224.mrna1;Target=ORF224 1 91 +
ChrX	stalkie_big_nohaplotig	exon	28070751	28072808	99	+	.	Parent=ORF224.mrna1;Target=ORF224 92 2149 +
ChrX	stalkie_big_nohaplotig	exon	28074186	28074362	99	+	.	Parent=ORF224.mrna1;Target=ORF224 2150 2326 +
ChrX	stalkie_big_nohaplotig	CDS	28070568	28070658	.	+	0	Parent=ORF224.mrna1;Target=ORF224 1 91 +
ChrX	stalkie_big_nohaplotig	CDS	28070751	28072808	.	+	2	Parent=ORF224.mrna1;Target=ORF224 92 2149 +
ChrX	stalkie_big_nohaplotig	CDS	28074186	28074361	.	+	2	Parent=ORF224.mrna1;Target=ORF224 2150 2325 +
ChrX	gffcl	locus	28077478	28080774	.	-	.	ID=RLOC_00001658;geneIDs=FBgn0032729.1.path1;transcripts=FBgn0032729.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28077478	28080774	.	-	.	ID=FBgn0032729.1.mrna1;geneID=FBgn0032729.1.path1;Name=FBgn0032729.1;Dir=sensecoverage=100.0;identity=99.4;matches=1381;mismatches=8;indels=0;unknowns=0;locus=RLOC_00001658
ChrX	stalkie_big_nohaplotig	exon	28077478	28077865	98	-	.	Parent=FBgn0032729.1.mrna1;Target=FBgn0032729.1 1002 1389 +
ChrX	stalkie_big_nohaplotig	exon	28078016	28078365	100	-	.	Parent=FBgn0032729.1.mrna1;Target=FBgn0032729.1 652 1001 +
ChrX	stalkie_big_nohaplotig	exon	28080071	28080584	99	-	.	Parent=FBgn0032729.1.mrna1;Target=FBgn0032729.1 138 651 +
ChrX	stalkie_big_nohaplotig	exon	28080638	28080774	100	-	.	Parent=FBgn0032729.1.mrna1;Target=FBgn0032729.1 1 137 +
ChrX	stalkie_big_nohaplotig	CDS	28077478	28077865	.	-	1	Parent=FBgn0032729.1.mrna1;Target=FBgn0032729.1 1002 1389 +
ChrX	stalkie_big_nohaplotig	CDS	28078016	28078365	.	-	0	Parent=FBgn0032729.1.mrna1;Target=FBgn0032729.1 652 1001 +
ChrX	stalkie_big_nohaplotig	CDS	28080071	28080584	.	-	1	Parent=FBgn0032729.1.mrna1;Target=FBgn0032729.1 138 651 +
ChrX	stalkie_big_nohaplotig	CDS	28080638	28080774	.	-	0	Parent=FBgn0032729.1.mrna1;Target=FBgn0032729.1 1 137 +
ChrX	gffcl	locus	28079299	28079605	.	+	.	ID=RLOC_00001659;geneIDs=comp113177_c0_seq1.path1;transcripts=comp113177_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28079299	28079605	.	+	.	ID=comp113177_c0_seq1.mrna1;geneID=comp113177_c0_seq1.path1;Name=comp113177_c0_seq1;Dir=indeterminatecoverage=92.7;identity=97.4;matches=299;mismatches=7;indels=1;unknowns=0;Target=comp113177_c0_seq1 330 25 .;CDS_Target=comp113177_c0_seq1 178 77 .;locus=RLOC_00001659
ChrX	stalkie_big_nohaplotig	exon	28079299	28079605	97	+	.	Parent=comp113177_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28079352	28079453	.	+	0	Parent=comp113177_c0_seq1.mrna1
ChrX	gffcl	locus	28083436	28086909	.	+	.	ID=RLOC_00001660;geneIDs=FBgn0032730.1.path1;transcripts=FBgn0032730.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28083436	28086909	.	+	.	ID=FBgn0032730.1.mrna1;geneID=FBgn0032730.1.path1;Name=FBgn0032730.1;Dir=sensecoverage=99.4;identity=98.1;matches=2958;mismatches=19;indels=39;unknowns=0;locus=RLOC_00001660
ChrX	stalkie_big_nohaplotig	exon	28083436	28083795	100	+	.	Parent=FBgn0032730.1.mrna1;Target=FBgn0032730.1 1 360 +
ChrX	stalkie_big_nohaplotig	exon	28084009	28084053	100	+	.	Parent=FBgn0032730.1.mrna1;Target=FBgn0032730.1 361 405 +
ChrX	stalkie_big_nohaplotig	exon	28084335	28086909	97	+	.	Parent=FBgn0032730.1.mrna1;Target=FBgn0032730.1 406 3013 +
ChrX	stalkie_big_nohaplotig	CDS	28083436	28083795	.	+	0	Parent=FBgn0032730.1.mrna1;Target=FBgn0032730.1 1 360 +
ChrX	stalkie_big_nohaplotig	CDS	28084009	28084053	.	+	0	Parent=FBgn0032730.1.mrna1;Target=FBgn0032730.1 361 405 +
ChrX	stalkie_big_nohaplotig	CDS	28084335	28086908	.	+	0	Parent=FBgn0032730.1.mrna1;Target=FBgn0032730.1 406 3012 +
ChrX	gffcl	locus	28092795	28094086	.	+	.	ID=RLOC_00001661;geneIDs=comp157425_c0_seq1.path1;transcripts=comp157425_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28092795	28094086	.	+	.	ID=comp157425_c0_seq1.mrna1;geneID=comp157425_c0_seq1.path1;Name=comp157425_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1289;mismatches=2;indels=2;unknowns=0;Target=comp157425_c0_seq1 1292 1 .;CDS_Target=comp157425_c0_seq1 711 553 .;locus=RLOC_00001661
ChrX	stalkie_big_nohaplotig	exon	28092795	28094086	99	+	.	Parent=comp157425_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28093346	28093504	.	+	0	Parent=comp157425_c0_seq1.mrna1
ChrX	gffcl	locus	28094370	28142440	.	-	.	ID=RLOC_00001662;geneIDs=FBgn0032731.1.path1;transcripts=FBgn0032731.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28094370	28142440	.	-	.	ID=FBgn0032731.1.mrna1;geneID=FBgn0032731.1.path1;Name=FBgn0032731.1;Dir=sensecoverage=100.0;identity=99.9;matches=686;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001662
ChrX	stalkie_big_nohaplotig	exon	28094370	28094781	99	-	.	Parent=FBgn0032731.1.mrna1;Target=FBgn0032731.1 276 687 +
ChrX	stalkie_big_nohaplotig	exon	28142166	28142440	100	-	.	Parent=FBgn0032731.1.mrna1;Target=FBgn0032731.1 1 275 +
ChrX	stalkie_big_nohaplotig	CDS	28094370	28094781	.	-	1	Parent=FBgn0032731.1.mrna1;Target=FBgn0032731.1 276 687 +
ChrX	stalkie_big_nohaplotig	CDS	28142166	28142440	.	-	0	Parent=FBgn0032731.1.mrna1;Target=FBgn0032731.1 1 275 +
ChrX	gffcl	locus	28154733	28155078	.	-	.	ID=RLOC_00001664;geneIDs=comp82764_c0_seq1.path1;transcripts=comp82764_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28154733	28155078	.	-	.	ID=comp82764_c0_seq1.mrna1;geneID=comp82764_c0_seq1.path1;Name=comp82764_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=345;mismatches=1;indels=0;unknowns=0;Target=comp82764_c0_seq1 346 1 .;CDS_Target=comp82764_c0_seq1 288 172 .;locus=RLOC_00001664
ChrX	stalkie_big_nohaplotig	exon	28154733	28155078	99	-	.	Parent=comp82764_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28154791	28154907	.	-	0	Parent=comp82764_c0_seq1.mrna1
ChrX	gffcl	locus	28155221	28155784	.	-	.	ID=RLOC_00001665;geneIDs=FBgn0032732.1.path1;transcripts=FBgn0032732.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28155221	28155784	.	-	.	ID=FBgn0032732.1.mrna1;geneID=FBgn0032732.1.path1;Name=FBgn0032732.1;Dir=sensecoverage=100.0;identity=99.5;matches=406;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001665
ChrX	stalkie_big_nohaplotig	exon	28155221	28155451	100	-	.	Parent=FBgn0032732.1.mrna1;Target=FBgn0032732.1 178 408 +
ChrX	stalkie_big_nohaplotig	exon	28155510	28155562	100	-	.	Parent=FBgn0032732.1.mrna1;Target=FBgn0032732.1 125 177 +
ChrX	stalkie_big_nohaplotig	exon	28155661	28155784	98	-	.	Parent=FBgn0032732.1.mrna1;Target=FBgn0032732.1 1 124 +
ChrX	stalkie_big_nohaplotig	CDS	28155221	28155451	.	-	0	Parent=FBgn0032732.1.mrna1;Target=FBgn0032732.1 178 408 +
ChrX	stalkie_big_nohaplotig	CDS	28155510	28155562	.	-	2	Parent=FBgn0032732.1.mrna1;Target=FBgn0032732.1 125 177 +
ChrX	stalkie_big_nohaplotig	CDS	28155661	28155784	.	-	0	Parent=FBgn0032732.1.mrna1;Target=FBgn0032732.1 1 124 +
ChrX	gffcl	locus	28157199	28162699	.	+	.	ID=RLOC_00001666;geneIDs=comp162340_c0_seq1.path1;transcripts=comp162340_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28157199	28162699	.	+	.	ID=comp162340_c0_seq1.mrna1;geneID=comp162340_c0_seq1.path1;Name=comp162340_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=2366;mismatches=8;indels=3;unknowns=0;Target=comp162340_c0_seq1 609 406 .;locus=RLOC_00001666
ChrX	stalkie_big_nohaplotig	exon	28157199	28157479	100	+	.	Parent=comp162340_c0_seq1.mrna1;Target=comp162340_c0_seq1 281 1 .
ChrX	stalkie_big_nohaplotig	exon	28157991	28159703	99	+	.	Parent=comp162340_c0_seq1.mrna1;Target=comp162340_c0_seq1 1997 282 .
ChrX	stalkie_big_nohaplotig	exon	28162259	28162405	99	+	.	Parent=comp162340_c0_seq1.mrna1;Target=comp162340_c0_seq1 2144 1998 .
ChrX	stalkie_big_nohaplotig	exon	28162467	28162699	99	+	.	Parent=comp162340_c0_seq1.mrna1;Target=comp162340_c0_seq1 2377 2145 .
ChrX	stalkie_big_nohaplotig	CDS	28158115	28158318	.	+	0	Parent=comp162340_c0_seq1.mrna1
ChrX	gffcl	locus	28157226	28162388	.	-	.	ID=RLOC_00001667;geneIDs=FBgn0032733.1.path1;transcripts=FBgn0032733.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28157226	28162388	.	-	.	ID=FBgn0032733.1.mrna1;geneID=FBgn0032733.1.path1;Name=FBgn0032733.1;Dir=sensecoverage=100.0;identity=99.6;matches=2091;mismatches=6;indels=3;unknowns=0;locus=RLOC_00001667
ChrX	stalkie_big_nohaplotig	exon	28157226	28157479	100	-	.	Parent=FBgn0032733.1.mrna1;Target=FBgn0032733.1 1847 2100 +
ChrX	stalkie_big_nohaplotig	exon	28157991	28159703	99	-	.	Parent=FBgn0032733.1.mrna1;Target=FBgn0032733.1 131 1846 +
ChrX	stalkie_big_nohaplotig	exon	28162259	28162388	99	-	.	Parent=FBgn0032733.1.mrna1;Target=FBgn0032733.1 1 130 +
ChrX	stalkie_big_nohaplotig	CDS	28157226	28157479	.	-	2	Parent=FBgn0032733.1.mrna1;Target=FBgn0032733.1 1847 2100 +
ChrX	stalkie_big_nohaplotig	CDS	28157991	28159703	.	-	2	Parent=FBgn0032733.1.mrna1;Target=FBgn0032733.1 131 1846 +
ChrX	stalkie_big_nohaplotig	CDS	28162259	28162388	.	-	0	Parent=FBgn0032733.1.mrna1;Target=FBgn0032733.1 1 130 +
ChrX	gffcl	locus	28178468	28186012	.	-	.	ID=RLOC_00001668;geneIDs=FBgn0046302.1.path1;transcripts=FBgn0046302.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28178468	28186012	.	-	.	ID=FBgn0046302.1.mrna1;geneID=FBgn0046302.1.path1;Name=FBgn0046302.1;Dir=sensecoverage=100.0;identity=100.0;matches=1362;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001668
ChrX	stalkie_big_nohaplotig	exon	28178468	28178661	100	-	.	Parent=FBgn0046302.1.mrna1;Target=FBgn0046302.1 1169 1362 +
ChrX	stalkie_big_nohaplotig	exon	28180147	28181091	100	-	.	Parent=FBgn0046302.1.mrna1;Target=FBgn0046302.1 224 1168 +
ChrX	stalkie_big_nohaplotig	exon	28185657	28185773	100	-	.	Parent=FBgn0046302.1.mrna1;Target=FBgn0046302.1 107 223 +
ChrX	stalkie_big_nohaplotig	exon	28185907	28186012	100	-	.	Parent=FBgn0046302.1.mrna1;Target=FBgn0046302.1 1 106 +
ChrX	stalkie_big_nohaplotig	CDS	28178468	28178661	.	-	2	Parent=FBgn0046302.1.mrna1;Target=FBgn0046302.1 1169 1362 +
ChrX	stalkie_big_nohaplotig	CDS	28180147	28181091	.	-	2	Parent=FBgn0046302.1.mrna1;Target=FBgn0046302.1 224 1168 +
ChrX	stalkie_big_nohaplotig	CDS	28185657	28185773	.	-	2	Parent=FBgn0046302.1.mrna1;Target=FBgn0046302.1 107 223 +
ChrX	stalkie_big_nohaplotig	CDS	28185907	28186012	.	-	0	Parent=FBgn0046302.1.mrna1;Target=FBgn0046302.1 1 106 +
ChrX	gffcl	locus	28178923	28179990	.	+	.	ID=RLOC_00001669;geneIDs=comp149835_c0_seq1.path1;transcripts=comp149835_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28178923	28179990	.	+	.	ID=comp149835_c0_seq1.mrna1;geneID=comp149835_c0_seq1.path1;Name=comp149835_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1064;mismatches=4;indels=0;unknowns=0;Target=comp149835_c0_seq1 1068 1 .;CDS_Target=comp149835_c0_seq1 301 155 .;locus=RLOC_00001669
ChrX	stalkie_big_nohaplotig	exon	28178923	28179990	99	+	.	Parent=comp149835_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28179077	28179223	.	+	0	Parent=comp149835_c0_seq1.mrna1
ChrX	gffcl	locus	28182204	28182787	.	+	.	ID=RLOC_00001670;geneIDs=comp7158_c0_seq1.path1;transcripts=comp7158_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28182204	28182787	.	+	.	ID=comp7158_c0_seq1.mrna1;geneID=comp7158_c0_seq1.path1;Name=comp7158_c0_seq1;Dir=indeterminatecoverage=96.5;identity=99.7;matches=582;mismatches=2;indels=0;unknowns=0;Target=comp7158_c0_seq1 604 21 .;CDS_Target=comp7158_c0_seq1 389 273 .;locus=RLOC_00001670
ChrX	stalkie_big_nohaplotig	exon	28182204	28182787	99	+	.	Parent=comp7158_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28182456	28182572	.	+	0	Parent=comp7158_c0_seq1.mrna1
ChrX	gffcl	locus	28205538	28210369	.	-	.	ID=RLOC_00001671;geneIDs=ORF3003.path1;transcripts=ORF3003.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28205538	28210369	.	-	.	ID=ORF3003.mrna1;geneID=ORF3003.path1;Name=ORF3003;Dir=sensecoverage=100.0;identity=98.2;matches=766;mismatches=2;indels=12;unknowns=0;locus=RLOC_00001671
ChrX	stalkie_big_nohaplotig	exon	28205538	28205731	99	-	.	Parent=ORF3003.mrna1;Target=ORF3003 587 780 +
ChrX	stalkie_big_nohaplotig	exon	28205837	28206310	97	-	.	Parent=ORF3003.mrna1;Target=ORF3003 101 586 +
ChrX	stalkie_big_nohaplotig	exon	28210270	28210369	99	-	.	Parent=ORF3003.mrna1;Target=ORF3003 1 100 +
ChrX	stalkie_big_nohaplotig	CDS	28205538	28205731	.	-	2	Parent=ORF3003.mrna1;Target=ORF3003 587 780 +
ChrX	stalkie_big_nohaplotig	CDS	28205837	28206310	.	-	2	Parent=ORF3003.mrna1;Target=ORF3003 101 586 +
ChrX	stalkie_big_nohaplotig	CDS	28210270	28210369	.	-	0	Parent=ORF3003.mrna1;Target=ORF3003 1 100 +
ChrX	gffcl	locus	28206792	28207146	.	+	.	ID=RLOC_00001672;geneIDs=comp1294466_c0_seq1.path1;transcripts=comp1294466_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28206792	28207146	.	+	.	ID=comp1294466_c0_seq1.mrna1;geneID=comp1294466_c0_seq1.path1;Name=comp1294466_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.4;matches=353;mismatches=2;indels=0;unknowns=0;Target=comp1294466_c0_seq1 357 3 .;CDS_Target=comp1294466_c0_seq1 218 156 .;locus=RLOC_00001672
ChrX	stalkie_big_nohaplotig	exon	28206792	28207146	99	+	.	Parent=comp1294466_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28206945	28207007	.	+	0	Parent=comp1294466_c0_seq1.mrna1
ChrX	gffcl	locus	28207154	28207471	.	+	.	ID=RLOC_00001673;geneIDs=comp144870_c0_seq1.path1;transcripts=comp144870_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28207154	28207471	.	+	.	ID=comp144870_c0_seq1.mrna1;geneID=comp144870_c0_seq1.path1;Name=comp144870_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=312;mismatches=6;indels=2;unknowns=0;Target=comp144870_c0_seq1 320 1 .;CDS_Target=comp144870_c0_seq1 84 1 .;locus=RLOC_00001673
ChrX	stalkie_big_nohaplotig	exon	28207154	28207471	97	+	.	Parent=comp144870_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28207154	28207235	.	+	0	Parent=comp144870_c0_seq1.mrna1
ChrX	gffcl	locus	28238237	28254855	.	-	.	ID=RLOC_00001674;geneIDs=comp135596_c0_seq1.path1;transcripts=comp135596_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28238237	28254855	.	-	.	ID=comp135596_c0_seq1.mrna1;geneID=comp135596_c0_seq1.path1;Name=comp135596_c0_seq1;Dir=sensecoverage=98.9;identity=100.0;matches=1597;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001674
ChrX	stalkie_big_nohaplotig	exon	28238237	28238964	100	-	.	Parent=comp135596_c0_seq1.mrna1;Target=comp135596_c0_seq1 874 1601 +
ChrX	stalkie_big_nohaplotig	exon	28239029	28239556	100	-	.	Parent=comp135596_c0_seq1.mrna1;Target=comp135596_c0_seq1 346 873 +
ChrX	stalkie_big_nohaplotig	exon	28254515	28254855	100	-	.	Parent=comp135596_c0_seq1.mrna1;Target=comp135596_c0_seq1 5 345 +
ChrX	stalkie_big_nohaplotig	CDS	28238756	28238964	.	-	2	Parent=comp135596_c0_seq1.mrna1;Target=comp135596_c0_seq1 874 1082 +
ChrX	stalkie_big_nohaplotig	CDS	28239029	28239556	.	-	2	Parent=comp135596_c0_seq1.mrna1;Target=comp135596_c0_seq1 346 873 +
ChrX	stalkie_big_nohaplotig	CDS	28254515	28254572	.	-	0	Parent=comp135596_c0_seq1.mrna1;Target=comp135596_c0_seq1 288 345 +
ChrX	gffcl	locus	28241343	28241788	.	+	.	ID=RLOC_00001675;geneIDs=comp6418_c1_seq1.path1;transcripts=comp6418_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28241343	28241788	.	+	.	ID=comp6418_c1_seq1.mrna1;geneID=comp6418_c1_seq1.path1;Name=comp6418_c1_seq1;Dir=indeterminatecoverage=99.8;identity=99.1;matches=421;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001675
ChrX	stalkie_big_nohaplotig	exon	28241343	28241400	94	+	.	Parent=comp6418_c1_seq1.mrna1;Target=comp6418_c1_seq1 58 1 .
ChrX	stalkie_big_nohaplotig	exon	28241422	28241788	99	+	.	Parent=comp6418_c1_seq1.mrna1;Target=comp6418_c1_seq1 425 59 .
ChrX	stalkie_big_nohaplotig	CDS	28241345	28241400	.	+	0	Parent=comp6418_c1_seq1.mrna1;Target=comp6418_c1_seq1 58 3 .
ChrX	stalkie_big_nohaplotig	CDS	28241422	28241452	.	+	1	Parent=comp6418_c1_seq1.mrna1;Target=comp6418_c1_seq1 89 59 .
ChrX	gffcl	locus	28279670	28286344	.	-	.	ID=RLOC_00001676;geneIDs=ORF2427.path1;transcripts=ORF2427.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28279670	28286344	.	-	.	ID=ORF2427.mrna1;geneID=ORF2427.path1;Name=ORF2427;Dir=sensecoverage=100.0;identity=100.0;matches=861;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001676
ChrX	stalkie_big_nohaplotig	exon	28279670	28279929	100	-	.	Parent=ORF2427.mrna1;Target=ORF2427 602 861 +
ChrX	stalkie_big_nohaplotig	exon	28280732	28281253	100	-	.	Parent=ORF2427.mrna1;Target=ORF2427 80 601 +
ChrX	stalkie_big_nohaplotig	exon	28286266	28286344	100	-	.	Parent=ORF2427.mrna1;Target=ORF2427 1 79 +
ChrX	stalkie_big_nohaplotig	CDS	28279670	28279929	.	-	2	Parent=ORF2427.mrna1;Target=ORF2427 602 861 +
ChrX	stalkie_big_nohaplotig	CDS	28280732	28281253	.	-	2	Parent=ORF2427.mrna1;Target=ORF2427 80 601 +
ChrX	stalkie_big_nohaplotig	CDS	28286266	28286344	.	-	0	Parent=ORF2427.mrna1;Target=ORF2427 1 79 +
ChrX	gffcl	locus	28290615	28291380	.	-	.	ID=RLOC_00001677;geneIDs=comp150271_c1_seq1.path1;transcripts=comp150271_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28290615	28291380	.	-	.	ID=comp150271_c1_seq1.mrna1;geneID=comp150271_c1_seq1.path1;Name=comp150271_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=766;mismatches=0;indels=0;unknowns=0;Target=comp150271_c1_seq1 766 1 .;CDS_Target=comp150271_c1_seq1 640 578 .;locus=RLOC_00001677
ChrX	stalkie_big_nohaplotig	exon	28290615	28291380	100	-	.	Parent=comp150271_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28290741	28290803	.	-	0	Parent=comp150271_c1_seq1.mrna1
ChrX	gffcl	locus	28291683	28291963	.	+	.	ID=RLOC_00001678;geneIDs=comp117451_c0_seq1.path1;transcripts=comp117451_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28291683	28291963	.	+	.	ID=comp117451_c0_seq1.mrna1;geneID=comp117451_c0_seq1.path1;Name=comp117451_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=281;mismatches=0;indels=0;unknowns=0;Target=comp117451_c0_seq1 281 1 .;CDS_Target=comp117451_c0_seq1 115 2 .;locus=RLOC_00001678
ChrX	stalkie_big_nohaplotig	exon	28291683	28291963	100	+	.	Parent=comp117451_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28291684	28291797	.	+	0	Parent=comp117451_c0_seq1.mrna1
ChrX	gffcl	locus	28301713	28314207	.	-	.	ID=RLOC_00001679;geneIDs=FBgn0032023.1.path1;transcripts=FBgn0032023.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28301713	28314207	.	-	.	ID=FBgn0032023.1.mrna1;geneID=FBgn0032023.1.path1;Name=FBgn0032023.1;Dir=sensecoverage=100.0;identity=99.7;matches=634;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001679
ChrX	stalkie_big_nohaplotig	exon	28301713	28302005	99	-	.	Parent=FBgn0032023.1.mrna1;Target=FBgn0032023.1 344 636 +
ChrX	stalkie_big_nohaplotig	exon	28302160	28302286	100	-	.	Parent=FBgn0032023.1.mrna1;Target=FBgn0032023.1 217 343 +
ChrX	stalkie_big_nohaplotig	exon	28313388	28313473	100	-	.	Parent=FBgn0032023.1.mrna1;Target=FBgn0032023.1 131 216 +
ChrX	stalkie_big_nohaplotig	exon	28314078	28314207	99	-	.	Parent=FBgn0032023.1.mrna1;Target=FBgn0032023.1 1 130 +
ChrX	stalkie_big_nohaplotig	CDS	28301713	28302005	.	-	2	Parent=FBgn0032023.1.mrna1;Target=FBgn0032023.1 344 636 +
ChrX	stalkie_big_nohaplotig	CDS	28302160	28302286	.	-	0	Parent=FBgn0032023.1.mrna1;Target=FBgn0032023.1 217 343 +
ChrX	stalkie_big_nohaplotig	CDS	28313388	28313473	.	-	2	Parent=FBgn0032023.1.mrna1;Target=FBgn0032023.1 131 216 +
ChrX	stalkie_big_nohaplotig	CDS	28314078	28314207	.	-	0	Parent=FBgn0032023.1.mrna1;Target=FBgn0032023.1 1 130 +
ChrX	gffcl	locus	28332423	28333709	.	-	.	ID=RLOC_00001680;geneIDs=FBgn0033868.3.path1;transcripts=FBgn0033868.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28332423	28333709	.	-	.	ID=FBgn0033868.3.mrna1;geneID=FBgn0033868.3.path1;Name=FBgn0033868.3;Dir=sensecoverage=100.0;identity=96.0;matches=971;mismatches=40;indels=0;unknowns=0;locus=RLOC_00001680
ChrX	stalkie_big_nohaplotig	exon	28332423	28332587	93	-	.	Parent=FBgn0033868.3.mrna1;Target=FBgn0033868.3 847 1011 +
ChrX	stalkie_big_nohaplotig	exon	28332671	28332744	94	-	.	Parent=FBgn0033868.3.mrna1;Target=FBgn0033868.3 773 846 +
ChrX	stalkie_big_nohaplotig	exon	28332803	28333052	99	-	.	Parent=FBgn0033868.3.mrna1;Target=FBgn0033868.3 523 772 +
ChrX	stalkie_big_nohaplotig	exon	28333129	28333348	99	-	.	Parent=FBgn0033868.3.mrna1;Target=FBgn0033868.3 303 522 +
ChrX	stalkie_big_nohaplotig	exon	28333408	28333709	92	-	.	Parent=FBgn0033868.3.mrna1;Target=FBgn0033868.3 1 302 +
ChrX	stalkie_big_nohaplotig	CDS	28332423	28332587	.	-	0	Parent=FBgn0033868.3.mrna1;Target=FBgn0033868.3 847 1011 +
ChrX	stalkie_big_nohaplotig	CDS	28332671	28332744	.	-	2	Parent=FBgn0033868.3.mrna1;Target=FBgn0033868.3 773 846 +
ChrX	stalkie_big_nohaplotig	CDS	28332803	28333052	.	-	0	Parent=FBgn0033868.3.mrna1;Target=FBgn0033868.3 523 772 +
ChrX	stalkie_big_nohaplotig	CDS	28333129	28333348	.	-	1	Parent=FBgn0033868.3.mrna1;Target=FBgn0033868.3 303 522 +
ChrX	stalkie_big_nohaplotig	CDS	28333408	28333709	.	-	0	Parent=FBgn0033868.3.mrna1;Target=FBgn0033868.3 1 302 +
ChrX	gffcl	locus	28349041	28349969	.	+	.	ID=RLOC_00001681;geneIDs=comp151084_c0_seq1.path1;transcripts=comp151084_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28349041	28349969	.	+	.	ID=comp151084_c0_seq1.mrna1;geneID=comp151084_c0_seq1.path1;Name=comp151084_c0_seq1;Dir=indeterminatecoverage=98.2;identity=99.0;matches=920;mismatches=7;indels=2;unknowns=0;Target=comp151084_c0_seq1 943 17 .;CDS_Target=comp151084_c0_seq1 716 135 .;locus=RLOC_00001681
ChrX	stalkie_big_nohaplotig	exon	28349041	28349969	99	+	.	Parent=comp151084_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28349161	28349742	.	+	0	Parent=comp151084_c0_seq1.mrna1
ChrX	gffcl	locus	28353624	28354456	.	-	.	ID=RLOC_00001682;geneIDs=comp134761_c0_seq1.path1;transcripts=comp134761_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28353624	28354456	.	-	.	ID=comp134761_c0_seq1.mrna1;geneID=comp134761_c0_seq1.path1;Name=comp134761_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=831;mismatches=2;indels=0;unknowns=0;Target=comp134761_c0_seq1 833 1 .;CDS_Target=comp134761_c0_seq1 752 156 .;locus=RLOC_00001682
ChrX	stalkie_big_nohaplotig	exon	28353624	28354456	99	-	.	Parent=comp134761_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28353705	28354301	.	-	0	Parent=comp134761_c0_seq1.mrna1
ChrX	gffcl	locus	28355849	28356060	.	+	.	ID=RLOC_00001683;geneIDs=comp999230_c0_seq1.path1;transcripts=comp999230_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28355849	28356060	.	+	.	ID=comp999230_c0_seq1.mrna1;geneID=comp999230_c0_seq1.path1;Name=comp999230_c0_seq1;Dir=indeterminatecoverage=90.5;identity=95.8;matches=203;mismatches=6;indels=3;unknowns=0;Target=comp999230_c0_seq1 209 1 .;CDS_Target=comp999230_c0_seq1 135 19 .;locus=RLOC_00001683
ChrX	stalkie_big_nohaplotig	exon	28355849	28356060	95	+	.	Parent=comp999230_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28355867	28355983	.	+	0	Parent=comp999230_c0_seq1.mrna1
ChrX	gffcl	locus	28420256	28443035	.	-	.	ID=RLOC_00001684;geneIDs=FBgn0032022.1.path1;transcripts=FBgn0032022.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28420256	28443035	.	-	.	ID=FBgn0032022.1.mrna1;geneID=FBgn0032022.1.path1;Name=FBgn0032022.1;Dir=sensecoverage=100.0;identity=100.0;matches=477;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001684
ChrX	stalkie_big_nohaplotig	exon	28420256	28420659	100	-	.	Parent=FBgn0032022.1.mrna1;Target=FBgn0032022.1 74 477 +
ChrX	stalkie_big_nohaplotig	exon	28442963	28443035	100	-	.	Parent=FBgn0032022.1.mrna1;Target=FBgn0032022.1 1 73 +
ChrX	stalkie_big_nohaplotig	CDS	28420256	28420659	.	-	2	Parent=FBgn0032022.1.mrna1;Target=FBgn0032022.1 74 477 +
ChrX	stalkie_big_nohaplotig	CDS	28442963	28443035	.	-	0	Parent=FBgn0032022.1.mrna1;Target=FBgn0032022.1 1 73 +
ChrX	gffcl	locus	28480898	28481282	.	-	.	ID=RLOC_00001685;geneIDs=comp144237_c0_seq1.path1;transcripts=comp144237_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28480898	28481282	.	-	.	ID=comp144237_c0_seq1.mrna1;geneID=comp144237_c0_seq1.path1;Name=comp144237_c0_seq1;Dir=indeterminatecoverage=92.3;identity=99.7;matches=384;mismatches=1;indels=0;unknowns=0;Target=comp144237_c0_seq1 417 33 .;CDS_Target=comp144237_c0_seq1 285 196 .;locus=RLOC_00001685
ChrX	stalkie_big_nohaplotig	exon	28480898	28481282	99	-	.	Parent=comp144237_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28481030	28481119	.	-	0	Parent=comp144237_c0_seq1.mrna1
ChrX	gffcl	locus	28481323	28511834	.	+	.	ID=RLOC_00001686;geneIDs=FBgn0032021.1.path1;transcripts=FBgn0032021.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28481323	28511834	.	+	.	ID=FBgn0032021.1.mrna1;geneID=FBgn0032021.1.path1;Name=FBgn0032021.1;Dir=sensecoverage=100.0;identity=100.0;matches=483;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001686
ChrX	stalkie_big_nohaplotig	exon	28481323	28481425	100	+	.	Parent=FBgn0032021.1.mrna1;Target=FBgn0032021.1 1 103 +
ChrX	stalkie_big_nohaplotig	exon	28511353	28511526	100	+	.	Parent=FBgn0032021.1.mrna1;Target=FBgn0032021.1 104 277 +
ChrX	stalkie_big_nohaplotig	exon	28511629	28511834	100	+	.	Parent=FBgn0032021.1.mrna1;Target=FBgn0032021.1 278 483 +
ChrX	stalkie_big_nohaplotig	CDS	28481323	28481425	.	+	0	Parent=FBgn0032021.1.mrna1;Target=FBgn0032021.1 1 103 +
ChrX	stalkie_big_nohaplotig	CDS	28511353	28511526	.	+	2	Parent=FBgn0032021.1.mrna1;Target=FBgn0032021.1 104 277 +
ChrX	stalkie_big_nohaplotig	CDS	28511629	28511834	.	+	2	Parent=FBgn0032021.1.mrna1;Target=FBgn0032021.1 278 483 +
ChrX	gffcl	locus	28491635	28492716	.	-	.	ID=RLOC_00001687;geneIDs=comp145931_c0_seq1.path1;transcripts=comp145931_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28491635	28492716	.	-	.	ID=comp145931_c0_seq1.mrna1;geneID=comp145931_c0_seq1.path1;Name=comp145931_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=992;mismatches=0;indels=0;unknowns=0;Target=comp145931_c0_seq1 1 159 .;locus=RLOC_00001687
ChrX	stalkie_big_nohaplotig	exon	28491635	28492277	100	-	.	Parent=comp145931_c0_seq1.mrna1;Target=comp145931_c0_seq1 1 643 -
ChrX	stalkie_big_nohaplotig	exon	28492368	28492716	100	-	.	Parent=comp145931_c0_seq1.mrna1;Target=comp145931_c0_seq1 644 992 -
ChrX	stalkie_big_nohaplotig	CDS	28491635	28491793	.	-	0	Parent=comp145931_c0_seq1.mrna1
ChrX	gffcl	locus	28515456	28516367	.	+	.	ID=RLOC_00001688;geneIDs=comp149178_c0_seq1.path1;transcripts=comp149178_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28515456	28516367	.	+	.	ID=comp149178_c0_seq1.mrna1;geneID=comp149178_c0_seq1.path1;Name=comp149178_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.7;matches=901;mismatches=9;indels=3;unknowns=0;Target=comp149178_c0_seq1 912 2 .;CDS_Target=comp149178_c0_seq1 572 471 .;locus=RLOC_00001688
ChrX	stalkie_big_nohaplotig	exon	28515456	28516367	98	+	.	Parent=comp149178_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28515925	28516025	.	+	0	Parent=comp149178_c0_seq1.mrna1
ChrX	gffcl	locus	28516819	28517115	.	+	.	ID=RLOC_00001689;geneIDs=comp74373_c0_seq1.path1;transcripts=comp74373_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28516819	28517115	.	+	.	ID=comp74373_c0_seq1.mrna1;geneID=comp74373_c0_seq1.path1;Name=comp74373_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=294;mismatches=1;indels=2;unknowns=0;Target=comp74373_c0_seq1 295 1 .;CDS_Target=comp74373_c0_seq1 53 18 .;locus=RLOC_00001689
ChrX	stalkie_big_nohaplotig	exon	28516819	28517115	98	+	.	Parent=comp74373_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28516836	28516871	.	+	0	Parent=comp74373_c0_seq1.mrna1
ChrX	gffcl	locus	28517124	28517585	.	-	.	ID=RLOC_00001690;geneIDs=comp135353_c0_seq1.path1;transcripts=comp135353_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28517124	28517585	.	-	.	ID=comp135353_c0_seq1.mrna1;geneID=comp135353_c0_seq1.path1;Name=comp135353_c0_seq1;Dir=indeterminatecoverage=97.1;identity=98.1;matches=454;mismatches=8;indels=1;unknowns=0;Target=comp135353_c0_seq1 463 1 .;CDS_Target=comp135353_c0_seq1 172 116 .;locus=RLOC_00001690
ChrX	stalkie_big_nohaplotig	exon	28517124	28517585	98	-	.	Parent=comp135353_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28517415	28517471	.	-	0	Parent=comp135353_c0_seq1.mrna1
ChrX	gffcl	locus	28518381	28522858	.	-	.	ID=RLOC_00001691;geneIDs=FBgn0032020.1.path1,comp146747_c0_seq1.path1,comp147632_c1_seq1.path1;transcripts=comp146747_c0_seq1.mrna1,comp147632_c1_seq1.mrna1,FBgn0032020.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28518381	28522610	.	-	.	ID=comp146747_c0_seq1.mrna1;geneID=comp146747_c0_seq1.path1;Name=comp146747_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=372;mismatches=0;indels=1;unknowns=0;Target=comp146747_c0_seq1 124 255 +;locus=RLOC_00001691
ChrX	stalkie_big_nohaplotig	exon	28518381	28518729	99	-	.	Parent=comp146747_c0_seq1.mrna1;Target=comp146747_c0_seq1 24 373 +
ChrX	stalkie_big_nohaplotig	exon	28522588	28522610	100	-	.	Parent=comp146747_c0_seq1.mrna1;Target=comp146747_c0_seq1 1 23 +
ChrX	stalkie_big_nohaplotig	CDS	28518498	28518629	.	-	0	Parent=comp146747_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28521972	28522858	.	-	.	ID=comp147632_c1_seq1.mrna1;geneID=comp147632_c1_seq1.path1;Name=comp147632_c1_seq1;Dir=indeterminatecoverage=98.1;identity=100.0;matches=887;mismatches=0;indels=0;unknowns=0;Target=comp147632_c1_seq1 904 18 .;CDS_Target=comp147632_c1_seq1 699 364 .;locus=RLOC_00001691
ChrX	stalkie_big_nohaplotig	exon	28521972	28522858	100	-	.	Parent=comp147632_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28522177	28522512	.	-	0	Parent=comp147632_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28522180	28522704	.	-	.	ID=FBgn0032020.1.mrna1;geneID=FBgn0032020.1.path1;Name=FBgn0032020.1;Dir=sensecoverage=99.8;identity=100.0;matches=410;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001691
ChrX	stalkie_big_nohaplotig	exon	28522180	28522452	100	-	.	Parent=FBgn0032020.1.mrna1;Target=FBgn0032020.1 139 411 +
ChrX	stalkie_big_nohaplotig	exon	28522568	28522704	100	-	.	Parent=FBgn0032020.1.mrna1;Target=FBgn0032020.1 2 138 +
ChrX	stalkie_big_nohaplotig	CDS	28522180	28522452	.	-	0	Parent=FBgn0032020.1.mrna1;Target=FBgn0032020.1 139 411 +
ChrX	stalkie_big_nohaplotig	CDS	28522568	28522702	.	-	0	Parent=FBgn0032020.1.mrna1;Target=FBgn0032020.1 4 138 +
ChrX	gffcl	locus	28524705	28542545	.	-	.	ID=RLOC_00001692;geneIDs=FBgn0032018.1.path1;transcripts=FBgn0032018.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28524705	28542545	.	-	.	ID=FBgn0032018.1.mrna1;geneID=FBgn0032018.1.path1;Name=FBgn0032018.1;Dir=sensecoverage=100.0;identity=99.8;matches=4514;mismatches=7;indels=0;unknowns=0;locus=RLOC_00001692
ChrX	stalkie_big_nohaplotig	exon	28524705	28525183	99	-	.	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 4043 4521 +
ChrX	stalkie_big_nohaplotig	exon	28525953	28526789	99	-	.	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 3206 4042 +
ChrX	stalkie_big_nohaplotig	exon	28526851	28526983	100	-	.	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 3073 3205 +
ChrX	stalkie_big_nohaplotig	exon	28527057	28527434	100	-	.	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 2695 3072 +
ChrX	stalkie_big_nohaplotig	exon	28529245	28529424	100	-	.	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 2515 2694 +
ChrX	stalkie_big_nohaplotig	exon	28529491	28529633	100	-	.	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 2372 2514 +
ChrX	stalkie_big_nohaplotig	exon	28530335	28530574	100	-	.	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 2132 2371 +
ChrX	stalkie_big_nohaplotig	exon	28530641	28530758	99	-	.	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 2014 2131 +
ChrX	stalkie_big_nohaplotig	exon	28531034	28531216	100	-	.	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 1831 2013 +
ChrX	stalkie_big_nohaplotig	exon	28531277	28531783	100	-	.	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 1324 1830 +
ChrX	stalkie_big_nohaplotig	exon	28532500	28532711	99	-	.	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 1112 1323 +
ChrX	stalkie_big_nohaplotig	exon	28541303	28541750	100	-	.	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 664 1111 +
ChrX	stalkie_big_nohaplotig	exon	28541811	28542043	100	-	.	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 431 663 +
ChrX	stalkie_big_nohaplotig	exon	28542116	28542545	100	-	.	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 1 430 +
ChrX	stalkie_big_nohaplotig	CDS	28524705	28525183	.	-	2	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 4043 4521 +
ChrX	stalkie_big_nohaplotig	CDS	28525953	28526789	.	-	2	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 3206 4042 +
ChrX	stalkie_big_nohaplotig	CDS	28526851	28526983	.	-	0	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 3073 3205 +
ChrX	stalkie_big_nohaplotig	CDS	28527057	28527434	.	-	0	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 2695 3072 +
ChrX	stalkie_big_nohaplotig	CDS	28529245	28529424	.	-	0	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 2515 2694 +
ChrX	stalkie_big_nohaplotig	CDS	28529491	28529633	.	-	2	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 2372 2514 +
ChrX	stalkie_big_nohaplotig	CDS	28530335	28530574	.	-	2	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 2132 2371 +
ChrX	stalkie_big_nohaplotig	CDS	28530641	28530758	.	-	0	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 2014 2131 +
ChrX	stalkie_big_nohaplotig	CDS	28531034	28531216	.	-	0	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 1831 2013 +
ChrX	stalkie_big_nohaplotig	CDS	28531277	28531783	.	-	0	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 1324 1830 +
ChrX	stalkie_big_nohaplotig	CDS	28532500	28532711	.	-	2	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 1112 1323 +
ChrX	stalkie_big_nohaplotig	CDS	28541303	28541750	.	-	0	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 664 1111 +
ChrX	stalkie_big_nohaplotig	CDS	28541811	28542043	.	-	2	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 431 663 +
ChrX	stalkie_big_nohaplotig	CDS	28542116	28542545	.	-	0	Parent=FBgn0032018.1.mrna1;Target=FBgn0032018.1 1 430 +
ChrX	gffcl	locus	28534135	28534508	.	-	.	ID=RLOC_00001693;geneIDs=comp113242_c0_seq1.path1;transcripts=comp113242_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28534135	28534508	.	-	.	ID=comp113242_c0_seq1.mrna1;geneID=comp113242_c0_seq1.path1;Name=comp113242_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=373;mismatches=1;indels=0;unknowns=0;Target=comp113242_c0_seq1 375 2 .;CDS_Target=comp113242_c0_seq1 375 277 .;locus=RLOC_00001693
ChrX	stalkie_big_nohaplotig	exon	28534135	28534508	99	-	.	Parent=comp113242_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28534135	28534233	.	-	0	Parent=comp113242_c0_seq1.mrna1
ChrX	gffcl	locus	28539239	28539658	.	-	.	ID=RLOC_00001695;geneIDs=Dp_FBgn0245431.1.path1;transcripts=Dp_FBgn0245431.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28539239	28539658	.	-	.	ID=Dp_FBgn0245431.1.mrna1;geneID=Dp_FBgn0245431.1.path1;Name=Dp_FBgn0245431.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=417;mismatches=3;indels=0;unknowns=0;Target=Dp_FBgn0245431.1 420 1 .;locus=RLOC_00001695
ChrX	stalkie_big_nohaplotig	exon	28539239	28539658	99	-	.	Parent=Dp_FBgn0245431.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28539239	28539658	.	-	0	Parent=Dp_FBgn0245431.1.mrna1
ChrX	gffcl	locus	28547764	28548183	.	-	.	ID=RLOC_00001697;geneIDs=Dp_FBgn0245431.1.path2;transcripts=Dp_FBgn0245431.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	28547764	28548183	.	-	.	ID=Dp_FBgn0245431.1.mrna2;geneID=Dp_FBgn0245431.1.path2;Name=Dp_FBgn0245431.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=417;mismatches=3;indels=0;unknowns=0;Target=Dp_FBgn0245431.1 420 1 .;locus=RLOC_00001697
ChrX	stalkie_big_nohaplotig	exon	28547764	28548183	99	-	.	Parent=Dp_FBgn0245431.1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	28547764	28548183	.	-	0	Parent=Dp_FBgn0245431.1.mrna2
ChrX	gffcl	locus	28549384	28550613	.	+	.	ID=RLOC_00001698;geneIDs=FBgn0032017.1.path1;transcripts=FBgn0032017.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28549384	28550613	.	+	.	ID=FBgn0032017.1.mrna1;geneID=FBgn0032017.1.path1;Name=FBgn0032017.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1227;mismatches=3;indels=0;unknowns=0;Target=FBgn0032017.1 1230 1 .;locus=RLOC_00001698
ChrX	stalkie_big_nohaplotig	exon	28549384	28550613	99	+	.	Parent=FBgn0032017.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28549384	28550613	.	+	0	Parent=FBgn0032017.1.mrna1
ChrX	gffcl	locus	28553596	28555310	.	-	.	ID=RLOC_00001699;geneIDs=FBgn0032016.1.path1;transcripts=FBgn0032016.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28553596	28555310	.	-	.	ID=FBgn0032016.1.mrna1;geneID=FBgn0032016.1.path1;Name=FBgn0032016.1;Dir=sensecoverage=100.0;identity=100.0;matches=1221;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001699
ChrX	stalkie_big_nohaplotig	exon	28553596	28554203	100	-	.	Parent=FBgn0032016.1.mrna1;Target=FBgn0032016.1 614 1221 +
ChrX	stalkie_big_nohaplotig	exon	28554269	28554611	100	-	.	Parent=FBgn0032016.1.mrna1;Target=FBgn0032016.1 271 613 +
ChrX	stalkie_big_nohaplotig	exon	28554973	28555176	100	-	.	Parent=FBgn0032016.1.mrna1;Target=FBgn0032016.1 67 270 +
ChrX	stalkie_big_nohaplotig	exon	28555245	28555310	100	-	.	Parent=FBgn0032016.1.mrna1;Target=FBgn0032016.1 1 66 +
ChrX	stalkie_big_nohaplotig	CDS	28553596	28554203	.	-	2	Parent=FBgn0032016.1.mrna1;Target=FBgn0032016.1 614 1221 +
ChrX	stalkie_big_nohaplotig	CDS	28554269	28554611	.	-	0	Parent=FBgn0032016.1.mrna1;Target=FBgn0032016.1 271 613 +
ChrX	stalkie_big_nohaplotig	CDS	28554973	28555176	.	-	0	Parent=FBgn0032016.1.mrna1;Target=FBgn0032016.1 67 270 +
ChrX	stalkie_big_nohaplotig	CDS	28555245	28555310	.	-	0	Parent=FBgn0032016.1.mrna1;Target=FBgn0032016.1 1 66 +
ChrX	gffcl	locus	28558087	28559397	.	+	.	ID=RLOC_00001700;geneIDs=FBgn0032015.1.path1;transcripts=FBgn0032015.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28558087	28559397	.	+	.	ID=FBgn0032015.1.mrna1;geneID=FBgn0032015.1.path1;Name=FBgn0032015.1;Dir=sensecoverage=100.0;identity=100.0;matches=1005;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001700
ChrX	stalkie_big_nohaplotig	exon	28558087	28558188	100	+	.	Parent=FBgn0032015.1.mrna1;Target=FBgn0032015.1 1 102 +
ChrX	stalkie_big_nohaplotig	exon	28558341	28559067	100	+	.	Parent=FBgn0032015.1.mrna1;Target=FBgn0032015.1 103 829 +
ChrX	stalkie_big_nohaplotig	exon	28559161	28559323	100	+	.	Parent=FBgn0032015.1.mrna1;Target=FBgn0032015.1 830 992 +
ChrX	stalkie_big_nohaplotig	exon	28559385	28559397	100	+	.	Parent=FBgn0032015.1.mrna1;Target=FBgn0032015.1 993 1005 +
ChrX	stalkie_big_nohaplotig	CDS	28558087	28558188	.	+	0	Parent=FBgn0032015.1.mrna1;Target=FBgn0032015.1 1 102 +
ChrX	stalkie_big_nohaplotig	CDS	28558341	28559067	.	+	0	Parent=FBgn0032015.1.mrna1;Target=FBgn0032015.1 103 829 +
ChrX	stalkie_big_nohaplotig	CDS	28559161	28559323	.	+	2	Parent=FBgn0032015.1.mrna1;Target=FBgn0032015.1 830 992 +
ChrX	stalkie_big_nohaplotig	CDS	28559385	28559397	.	+	1	Parent=FBgn0032015.1.mrna1;Target=FBgn0032015.1 993 1005 +
ChrX	gffcl	locus	28560659	28561654	.	+	.	ID=RLOC_00001701;geneIDs=ORF3274.path1;transcripts=ORF3274.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28560659	28561654	.	+	.	ID=ORF3274.mrna1;geneID=ORF3274.path1;Name=ORF3274;Dir=sensecoverage=99.5;identity=98.9;matches=738;mismatches=8;indels=0;unknowns=0;locus=RLOC_00001701
ChrX	stalkie_big_nohaplotig	exon	28560659	28560793	99	+	.	Parent=ORF3274.mrna1;Target=ORF3274 5 139 +
ChrX	stalkie_big_nohaplotig	exon	28561044	28561654	98	+	.	Parent=ORF3274.mrna1;Target=ORF3274 140 750 +
ChrX	stalkie_big_nohaplotig	CDS	28560661	28560793	.	+	0	Parent=ORF3274.mrna1;Target=ORF3274 7 139 +
ChrX	stalkie_big_nohaplotig	CDS	28561044	28561654	.	+	2	Parent=ORF3274.mrna1;Target=ORF3274 140 750 +
ChrX	gffcl	locus	28564067	28567518	.	-	.	ID=RLOC_00001702;geneIDs=FBgn0032728.1.path1;transcripts=FBgn0032728.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28564067	28567518	.	-	.	ID=FBgn0032728.1.mrna1;geneID=FBgn0032728.1.path1;Name=FBgn0032728.1;Dir=sensecoverage=100.0;identity=99.0;matches=2491;mismatches=14;indels=10;unknowns=0;locus=RLOC_00001702
ChrX	stalkie_big_nohaplotig	exon	28564067	28564402	98	-	.	Parent=FBgn0032728.1.mrna1;Target=FBgn0032728.1 2176 2511 +
ChrX	stalkie_big_nohaplotig	exon	28564468	28564619	100	-	.	Parent=FBgn0032728.1.mrna1;Target=FBgn0032728.1 2024 2175 +
ChrX	stalkie_big_nohaplotig	exon	28565497	28567518	99	-	.	Parent=FBgn0032728.1.mrna1;Target=FBgn0032728.1 2 2023 +
ChrX	stalkie_big_nohaplotig	CDS	28564067	28564402	.	-	0	Parent=FBgn0032728.1.mrna1;Target=FBgn0032728.1 2176 2511 +
ChrX	stalkie_big_nohaplotig	CDS	28564468	28564619	.	-	2	Parent=FBgn0032728.1.mrna1;Target=FBgn0032728.1 2024 2175 +
ChrX	stalkie_big_nohaplotig	CDS	28565497	28567516	.	-	0	Parent=FBgn0032728.1.mrna1;Target=FBgn0032728.1 4 2023 +
ChrX	gffcl	locus	28569238	28570719	.	+	.	ID=RLOC_00001703;geneIDs=FBgn0037202.1.path1;transcripts=FBgn0037202.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28569238	28570719	.	+	.	ID=FBgn0037202.1.mrna1;geneID=FBgn0037202.1.path1;Name=FBgn0037202.1;Dir=sensecoverage=100.0;identity=99.8;matches=1275;mismatches=3;indels=0;unknowns=0;locus=RLOC_00001703
ChrX	stalkie_big_nohaplotig	exon	28569238	28569335	100	+	.	Parent=FBgn0037202.1.mrna1;Target=FBgn0037202.1 1 98 +
ChrX	stalkie_big_nohaplotig	exon	28569404	28569605	100	+	.	Parent=FBgn0037202.1.mrna1;Target=FBgn0037202.1 99 300 +
ChrX	stalkie_big_nohaplotig	exon	28569678	28569817	99	+	.	Parent=FBgn0037202.1.mrna1;Target=FBgn0037202.1 301 440 +
ChrX	stalkie_big_nohaplotig	exon	28569882	28570719	99	+	.	Parent=FBgn0037202.1.mrna1;Target=FBgn0037202.1 441 1278 +
ChrX	stalkie_big_nohaplotig	CDS	28569238	28569335	.	+	0	Parent=FBgn0037202.1.mrna1;Target=FBgn0037202.1 1 98 +
ChrX	stalkie_big_nohaplotig	CDS	28569404	28569605	.	+	1	Parent=FBgn0037202.1.mrna1;Target=FBgn0037202.1 99 300 +
ChrX	stalkie_big_nohaplotig	CDS	28569678	28569817	.	+	0	Parent=FBgn0037202.1.mrna1;Target=FBgn0037202.1 301 440 +
ChrX	stalkie_big_nohaplotig	CDS	28569882	28570719	.	+	1	Parent=FBgn0037202.1.mrna1;Target=FBgn0037202.1 441 1278 +
ChrX	gffcl	locus	28572616	28573765	.	-	.	ID=RLOC_00001704;geneIDs=FBgn0032014.1.path1;transcripts=FBgn0032014.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28572616	28573765	.	-	.	ID=FBgn0032014.1.mrna1;geneID=FBgn0032014.1.path1;Name=FBgn0032014.1;Dir=sensecoverage=100.0;identity=99.6;matches=1031;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001704
ChrX	stalkie_big_nohaplotig	exon	28572616	28572705	100	-	.	Parent=FBgn0032014.1.mrna1;Target=FBgn0032014.1 946 1035 +
ChrX	stalkie_big_nohaplotig	exon	28572764	28573065	100	-	.	Parent=FBgn0032014.1.mrna1;Target=FBgn0032014.1 644 945 +
ChrX	stalkie_big_nohaplotig	exon	28573123	28573765	99	-	.	Parent=FBgn0032014.1.mrna1;Target=FBgn0032014.1 1 643 +
ChrX	stalkie_big_nohaplotig	CDS	28572616	28572705	.	-	0	Parent=FBgn0032014.1.mrna1;Target=FBgn0032014.1 946 1035 +
ChrX	stalkie_big_nohaplotig	CDS	28572764	28573065	.	-	2	Parent=FBgn0032014.1.mrna1;Target=FBgn0032014.1 644 945 +
ChrX	stalkie_big_nohaplotig	CDS	28573123	28573765	.	-	0	Parent=FBgn0032014.1.mrna1;Target=FBgn0032014.1 1 643 +
ChrX	gffcl	locus	28576368	28579937	.	-	.	ID=RLOC_00001705;geneIDs=FBgn0032013.1.path1;transcripts=FBgn0032013.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28576368	28579937	.	-	.	ID=FBgn0032013.1.mrna1;geneID=FBgn0032013.1.path1;Name=FBgn0032013.1;Dir=sensecoverage=100.0;identity=99.7;matches=1364;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001705
ChrX	stalkie_big_nohaplotig	exon	28576368	28576473	100	-	.	Parent=FBgn0032013.1.mrna1;Target=FBgn0032013.1 1263 1368 +
ChrX	stalkie_big_nohaplotig	exon	28576543	28576686	100	-	.	Parent=FBgn0032013.1.mrna1;Target=FBgn0032013.1 1119 1262 +
ChrX	stalkie_big_nohaplotig	exon	28578147	28578248	100	-	.	Parent=FBgn0032013.1.mrna1;Target=FBgn0032013.1 1017 1118 +
ChrX	stalkie_big_nohaplotig	exon	28578581	28578988	99	-	.	Parent=FBgn0032013.1.mrna1;Target=FBgn0032013.1 609 1016 +
ChrX	stalkie_big_nohaplotig	exon	28579330	28579937	99	-	.	Parent=FBgn0032013.1.mrna1;Target=FBgn0032013.1 1 608 +
ChrX	stalkie_big_nohaplotig	CDS	28576368	28576473	.	-	1	Parent=FBgn0032013.1.mrna1;Target=FBgn0032013.1 1263 1368 +
ChrX	stalkie_big_nohaplotig	CDS	28576543	28576686	.	-	1	Parent=FBgn0032013.1.mrna1;Target=FBgn0032013.1 1119 1262 +
ChrX	stalkie_big_nohaplotig	CDS	28578147	28578248	.	-	1	Parent=FBgn0032013.1.mrna1;Target=FBgn0032013.1 1017 1118 +
ChrX	stalkie_big_nohaplotig	CDS	28578581	28578988	.	-	1	Parent=FBgn0032013.1.mrna1;Target=FBgn0032013.1 609 1016 +
ChrX	stalkie_big_nohaplotig	CDS	28579330	28579937	.	-	0	Parent=FBgn0032013.1.mrna1;Target=FBgn0032013.1 1 608 +
ChrX	gffcl	locus	28583169	28588114	.	+	.	ID=RLOC_00001706;geneIDs=FBgn0261020.1.path1;transcripts=FBgn0261020.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28583169	28588114	.	+	.	ID=FBgn0261020.1.mrna1;geneID=FBgn0261020.1.path1;Name=FBgn0261020.1;Dir=sensecoverage=100.0;identity=100.0;matches=1005;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001706
ChrX	stalkie_big_nohaplotig	exon	28583169	28583267	100	+	.	Parent=FBgn0261020.1.mrna1;Target=FBgn0261020.1 1 99 +
ChrX	stalkie_big_nohaplotig	exon	28583334	28583508	100	+	.	Parent=FBgn0261020.1.mrna1;Target=FBgn0261020.1 100 274 +
ChrX	stalkie_big_nohaplotig	exon	28585165	28585370	100	+	.	Parent=FBgn0261020.1.mrna1;Target=FBgn0261020.1 275 480 +
ChrX	stalkie_big_nohaplotig	exon	28585520	28585707	100	+	.	Parent=FBgn0261020.1.mrna1;Target=FBgn0261020.1 481 668 +
ChrX	stalkie_big_nohaplotig	exon	28585783	28585920	100	+	.	Parent=FBgn0261020.1.mrna1;Target=FBgn0261020.1 669 806 +
ChrX	stalkie_big_nohaplotig	exon	28587916	28588114	100	+	.	Parent=FBgn0261020.1.mrna1;Target=FBgn0261020.1 807 1005 +
ChrX	stalkie_big_nohaplotig	CDS	28583169	28583267	.	+	0	Parent=FBgn0261020.1.mrna1;Target=FBgn0261020.1 1 99 +
ChrX	stalkie_big_nohaplotig	CDS	28583334	28583508	.	+	0	Parent=FBgn0261020.1.mrna1;Target=FBgn0261020.1 100 274 +
ChrX	stalkie_big_nohaplotig	CDS	28585165	28585370	.	+	2	Parent=FBgn0261020.1.mrna1;Target=FBgn0261020.1 275 480 +
ChrX	stalkie_big_nohaplotig	CDS	28585520	28585707	.	+	0	Parent=FBgn0261020.1.mrna1;Target=FBgn0261020.1 481 668 +
ChrX	stalkie_big_nohaplotig	CDS	28585783	28585920	.	+	1	Parent=FBgn0261020.1.mrna1;Target=FBgn0261020.1 669 806 +
ChrX	stalkie_big_nohaplotig	CDS	28587916	28588114	.	+	1	Parent=FBgn0261020.1.mrna1;Target=FBgn0261020.1 807 1005 +
ChrX	gffcl	locus	28603921	28790508	.	+	.	ID=RLOC_00001707;geneIDs=FBgn0003502.1.path1;transcripts=FBgn0003502.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28603921	28790508	.	+	.	ID=FBgn0003502.1.mrna1;geneID=FBgn0003502.1.path1;Name=FBgn0003502.1;Dir=sensecoverage=100.0;identity=99.8;matches=2351;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001707
ChrX	stalkie_big_nohaplotig	exon	28603921	28604295	99	+	.	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 1 375 +
ChrX	stalkie_big_nohaplotig	exon	28671973	28672068	100	+	.	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 376 471 +
ChrX	stalkie_big_nohaplotig	exon	28672185	28672323	100	+	.	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 472 610 +
ChrX	stalkie_big_nohaplotig	exon	28675644	28675790	100	+	.	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 611 757 +
ChrX	stalkie_big_nohaplotig	exon	28784188	28784324	100	+	.	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 758 894 +
ChrX	stalkie_big_nohaplotig	exon	28784413	28784529	100	+	.	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 895 1011 +
ChrX	stalkie_big_nohaplotig	exon	28785974	28786054	100	+	.	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 1012 1092 +
ChrX	stalkie_big_nohaplotig	exon	28786242	28786372	100	+	.	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 1093 1223 +
ChrX	stalkie_big_nohaplotig	exon	28787145	28787273	100	+	.	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 1224 1352 +
ChrX	stalkie_big_nohaplotig	exon	28787351	28787544	100	+	.	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 1353 1546 +
ChrX	stalkie_big_nohaplotig	exon	28787616	28787956	100	+	.	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 1547 1887 +
ChrX	stalkie_big_nohaplotig	exon	28788059	28788296	100	+	.	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 1888 2125 +
ChrX	stalkie_big_nohaplotig	exon	28789347	28789480	100	+	.	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 2126 2259 +
ChrX	stalkie_big_nohaplotig	exon	28790413	28790508	98	+	.	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 2260 2355 +
ChrX	stalkie_big_nohaplotig	CDS	28603921	28604295	.	+	0	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 1 375 +
ChrX	stalkie_big_nohaplotig	CDS	28671973	28672068	.	+	0	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 376 471 +
ChrX	stalkie_big_nohaplotig	CDS	28672185	28672323	.	+	0	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 472 610 +
ChrX	stalkie_big_nohaplotig	CDS	28675644	28675790	.	+	2	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 611 757 +
ChrX	stalkie_big_nohaplotig	CDS	28784188	28784324	.	+	2	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 758 894 +
ChrX	stalkie_big_nohaplotig	CDS	28784413	28784529	.	+	0	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 895 1011 +
ChrX	stalkie_big_nohaplotig	CDS	28785974	28786054	.	+	0	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 1012 1092 +
ChrX	stalkie_big_nohaplotig	CDS	28786242	28786372	.	+	0	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 1093 1223 +
ChrX	stalkie_big_nohaplotig	CDS	28787145	28787273	.	+	1	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 1224 1352 +
ChrX	stalkie_big_nohaplotig	CDS	28787351	28787544	.	+	1	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 1353 1546 +
ChrX	stalkie_big_nohaplotig	CDS	28787616	28787956	.	+	2	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 1547 1887 +
ChrX	stalkie_big_nohaplotig	CDS	28788059	28788296	.	+	0	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 1888 2125 +
ChrX	stalkie_big_nohaplotig	CDS	28789347	28789480	.	+	2	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 2126 2259 +
ChrX	stalkie_big_nohaplotig	CDS	28790413	28790508	.	+	0	Parent=FBgn0003502.1.mrna1;Target=FBgn0003502.1 2260 2355 +
ChrX	gffcl	locus	28793072	28793877	.	+	.	ID=RLOC_00001708;geneIDs=comp152143_c0_seq1.path1;transcripts=comp152143_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28793072	28793877	.	+	.	ID=comp152143_c0_seq1.mrna1;geneID=comp152143_c0_seq1.path1;Name=comp152143_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=800;mismatches=6;indels=0;unknowns=0;Target=comp152143_c0_seq1 806 1 .;CDS_Target=comp152143_c0_seq1 284 177 .;locus=RLOC_00001708
ChrX	stalkie_big_nohaplotig	exon	28793072	28793877	99	+	.	Parent=comp152143_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28793248	28793355	.	+	0	Parent=comp152143_c0_seq1.mrna1
ChrX	gffcl	locus	28859477	28860006	.	-	.	ID=RLOC_00001710;geneIDs=comp149731_c0_seq1.path1;transcripts=comp149731_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28859477	28860006	.	-	.	ID=comp149731_c0_seq1.mrna1;geneID=comp149731_c0_seq1.path1;Name=comp149731_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=518;mismatches=12;indels=0;unknowns=0;Target=comp149731_c0_seq1 530 1 .;CDS_Target=comp149731_c0_seq1 466 248 .;locus=RLOC_00001710
ChrX	stalkie_big_nohaplotig	exon	28859477	28860006	97	-	.	Parent=comp149731_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28859541	28859759	.	-	0	Parent=comp149731_c0_seq1.mrna1
ChrX	gffcl	locus	28866621	28867457	.	+	.	ID=RLOC_00001711;geneIDs=comp151006_c0_seq1.path1;transcripts=comp151006_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28866621	28867457	.	+	.	ID=comp151006_c0_seq1.mrna1;geneID=comp151006_c0_seq1.path1;Name=comp151006_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.3;matches=825;mismatches=11;indels=3;unknowns=0;Target=comp151006_c0_seq1 838 1 .;CDS_Target=comp151006_c0_seq1 191 3 .;locus=RLOC_00001711
ChrX	stalkie_big_nohaplotig	exon	28866621	28867457	98	+	.	Parent=comp151006_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	28866623	28866810	.	+	0	Parent=comp151006_c0_seq1.mrna1
ChrX	gffcl	locus	28877241	28878877	.	+	.	ID=RLOC_00001712;geneIDs=FBgn0033774.1.path1;transcripts=FBgn0033774.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28877241	28878877	.	+	.	ID=FBgn0033774.1.mrna1;geneID=FBgn0033774.1.path1;Name=FBgn0033774.1;Dir=sensecoverage=97.8;identity=100.0;matches=1308;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001712
ChrX	stalkie_big_nohaplotig	exon	28877241	28877450	100	+	.	Parent=FBgn0033774.1.mrna1;Target=FBgn0033774.1 31 240 +
ChrX	stalkie_big_nohaplotig	exon	28877512	28877645	100	+	.	Parent=FBgn0033774.1.mrna1;Target=FBgn0033774.1 241 374 +
ChrX	stalkie_big_nohaplotig	exon	28877703	28878081	100	+	.	Parent=FBgn0033774.1.mrna1;Target=FBgn0033774.1 375 753 +
ChrX	stalkie_big_nohaplotig	exon	28878152	28878254	100	+	.	Parent=FBgn0033774.1.mrna1;Target=FBgn0033774.1 754 856 +
ChrX	stalkie_big_nohaplotig	exon	28878313	28878600	100	+	.	Parent=FBgn0033774.1.mrna1;Target=FBgn0033774.1 857 1144 +
ChrX	stalkie_big_nohaplotig	exon	28878684	28878877	100	+	.	Parent=FBgn0033774.1.mrna1;Target=FBgn0033774.1 1145 1338 +
ChrX	stalkie_big_nohaplotig	CDS	28877241	28877450	.	+	0	Parent=FBgn0033774.1.mrna1;Target=FBgn0033774.1 31 240 +
ChrX	stalkie_big_nohaplotig	CDS	28877512	28877645	.	+	0	Parent=FBgn0033774.1.mrna1;Target=FBgn0033774.1 241 374 +
ChrX	stalkie_big_nohaplotig	CDS	28877703	28878081	.	+	1	Parent=FBgn0033774.1.mrna1;Target=FBgn0033774.1 375 753 +
ChrX	stalkie_big_nohaplotig	CDS	28878152	28878254	.	+	0	Parent=FBgn0033774.1.mrna1;Target=FBgn0033774.1 754 856 +
ChrX	stalkie_big_nohaplotig	CDS	28878313	28878600	.	+	2	Parent=FBgn0033774.1.mrna1;Target=FBgn0033774.1 857 1144 +
ChrX	stalkie_big_nohaplotig	CDS	28878684	28878877	.	+	2	Parent=FBgn0033774.1.mrna1;Target=FBgn0033774.1 1145 1338 +
ChrX	gffcl	locus	28885658	28890182	.	+	.	ID=RLOC_00001713;geneIDs=FBgn0035718.1.path1;transcripts=FBgn0035718.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28885658	28890182	.	+	.	ID=FBgn0035718.1.mrna1;geneID=FBgn0035718.1.path1;Name=FBgn0035718.1;Dir=sensecoverage=100.0;identity=99.6;matches=1273;mismatches=5;indels=0;unknowns=0;locus=RLOC_00001713
ChrX	stalkie_big_nohaplotig	exon	28885658	28885840	100	+	.	Parent=FBgn0035718.1.mrna1;Target=FBgn0035718.1 1 183 +
ChrX	stalkie_big_nohaplotig	exon	28885942	28886078	100	+	.	Parent=FBgn0035718.1.mrna1;Target=FBgn0035718.1 184 320 +
ChrX	stalkie_big_nohaplotig	exon	28889034	28889412	99	+	.	Parent=FBgn0035718.1.mrna1;Target=FBgn0035718.1 321 699 +
ChrX	stalkie_big_nohaplotig	exon	28889476	28889569	100	+	.	Parent=FBgn0035718.1.mrna1;Target=FBgn0035718.1 700 793 +
ChrX	stalkie_big_nohaplotig	exon	28889631	28889924	99	+	.	Parent=FBgn0035718.1.mrna1;Target=FBgn0035718.1 794 1087 +
ChrX	stalkie_big_nohaplotig	exon	28889992	28890182	98	+	.	Parent=FBgn0035718.1.mrna1;Target=FBgn0035718.1 1088 1278 +
ChrX	stalkie_big_nohaplotig	CDS	28885658	28885840	.	+	0	Parent=FBgn0035718.1.mrna1;Target=FBgn0035718.1 1 183 +
ChrX	stalkie_big_nohaplotig	CDS	28885942	28886078	.	+	0	Parent=FBgn0035718.1.mrna1;Target=FBgn0035718.1 184 320 +
ChrX	stalkie_big_nohaplotig	CDS	28889034	28889412	.	+	1	Parent=FBgn0035718.1.mrna1;Target=FBgn0035718.1 321 699 +
ChrX	stalkie_big_nohaplotig	CDS	28889476	28889569	.	+	0	Parent=FBgn0035718.1.mrna1;Target=FBgn0035718.1 700 793 +
ChrX	stalkie_big_nohaplotig	CDS	28889631	28889924	.	+	2	Parent=FBgn0035718.1.mrna1;Target=FBgn0035718.1 794 1087 +
ChrX	stalkie_big_nohaplotig	CDS	28889992	28890182	.	+	2	Parent=FBgn0035718.1.mrna1;Target=FBgn0035718.1 1088 1278 +
ChrX	gffcl	locus	28890357	28895380	.	-	.	ID=RLOC_00001714;geneIDs=FBgn0032008.1.path1;transcripts=FBgn0032008.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28890357	28895380	.	-	.	ID=FBgn0032008.1.mrna1;geneID=FBgn0032008.1.path1;Name=FBgn0032008.1;Dir=sensecoverage=100.0;identity=99.2;matches=509;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001714
ChrX	stalkie_big_nohaplotig	exon	28890357	28890398	100	-	.	Parent=FBgn0032008.1.mrna1;Target=FBgn0032008.1 472 513 +
ChrX	stalkie_big_nohaplotig	exon	28890473	28890580	99	-	.	Parent=FBgn0032008.1.mrna1;Target=FBgn0032008.1 364 471 +
ChrX	stalkie_big_nohaplotig	exon	28894951	28895244	98	-	.	Parent=FBgn0032008.1.mrna1;Target=FBgn0032008.1 70 363 +
ChrX	stalkie_big_nohaplotig	exon	28895312	28895380	100	-	.	Parent=FBgn0032008.1.mrna1;Target=FBgn0032008.1 1 69 +
ChrX	stalkie_big_nohaplotig	CDS	28890357	28890398	.	-	0	Parent=FBgn0032008.1.mrna1;Target=FBgn0032008.1 472 513 +
ChrX	stalkie_big_nohaplotig	CDS	28890473	28890580	.	-	0	Parent=FBgn0032008.1.mrna1;Target=FBgn0032008.1 364 471 +
ChrX	stalkie_big_nohaplotig	CDS	28894951	28895244	.	-	0	Parent=FBgn0032008.1.mrna1;Target=FBgn0032008.1 70 363 +
ChrX	stalkie_big_nohaplotig	CDS	28895312	28895380	.	-	0	Parent=FBgn0032008.1.mrna1;Target=FBgn0032008.1 1 69 +
ChrX	gffcl	locus	28987872	28989223	.	-	.	ID=RLOC_00001715;geneIDs=comp157944_c0_seq1.path1;transcripts=comp157944_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28987872	28989223	.	-	.	ID=comp157944_c0_seq1.mrna1;geneID=comp157944_c0_seq1.path1;Name=comp157944_c0_seq1;Dir=sensecoverage=98.3;identity=99.7;matches=899;mismatches=3;indels=0;unknowns=0;Target=comp157944_c0_seq1 357 806 +;locus=RLOC_00001715
ChrX	stalkie_big_nohaplotig	exon	28987872	28988516	99	-	.	Parent=comp157944_c0_seq1.mrna1;Target=comp157944_c0_seq1 258 902 +
ChrX	stalkie_big_nohaplotig	exon	28988599	28988716	100	-	.	Parent=comp157944_c0_seq1.mrna1;Target=comp157944_c0_seq1 140 257 +
ChrX	stalkie_big_nohaplotig	exon	28989085	28989223	99	-	.	Parent=comp157944_c0_seq1.mrna1;Target=comp157944_c0_seq1 1 139 +
ChrX	stalkie_big_nohaplotig	CDS	28987968	28988417	.	-	0	Parent=comp157944_c0_seq1.mrna1
ChrX	gffcl	locus	28993187	29023104	.	+	.	ID=RLOC_00001716;geneIDs=FBgn0032006.1.path1;transcripts=FBgn0032006.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	28993187	29023104	.	+	.	ID=FBgn0032006.1.mrna1;geneID=FBgn0032006.1.path1;Name=FBgn0032006.1;Dir=sensecoverage=100.0;identity=100.0;matches=4476;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001716
ChrX	stalkie_big_nohaplotig	exon	28993187	28993352	100	+	.	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 1 166 +
ChrX	stalkie_big_nohaplotig	exon	29000026	29000412	100	+	.	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 167 553 +
ChrX	stalkie_big_nohaplotig	exon	29000493	29000620	100	+	.	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 554 681 +
ChrX	stalkie_big_nohaplotig	exon	29005170	29005344	100	+	.	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 682 856 +
ChrX	stalkie_big_nohaplotig	exon	29008746	29008897	100	+	.	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 857 1008 +
ChrX	stalkie_big_nohaplotig	exon	29010967	29011132	100	+	.	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 1009 1174 +
ChrX	stalkie_big_nohaplotig	exon	29011633	29012102	100	+	.	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 1175 1644 +
ChrX	stalkie_big_nohaplotig	exon	29012170	29012464	100	+	.	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 1645 1939 +
ChrX	stalkie_big_nohaplotig	exon	29013724	29013876	100	+	.	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 1940 2092 +
ChrX	stalkie_big_nohaplotig	exon	29013953	29014714	100	+	.	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 2093 2854 +
ChrX	stalkie_big_nohaplotig	exon	29014777	29014933	100	+	.	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 2855 3011 +
ChrX	stalkie_big_nohaplotig	exon	29017577	29017800	100	+	.	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 3012 3235 +
ChrX	stalkie_big_nohaplotig	exon	29020293	29020888	100	+	.	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 3236 3831 +
ChrX	stalkie_big_nohaplotig	exon	29022353	29022503	100	+	.	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 3832 3982 +
ChrX	stalkie_big_nohaplotig	exon	29022611	29023104	100	+	.	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 3983 4476 +
ChrX	stalkie_big_nohaplotig	CDS	28993187	28993352	.	+	0	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 1 166 +
ChrX	stalkie_big_nohaplotig	CDS	29000026	29000412	.	+	2	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 167 553 +
ChrX	stalkie_big_nohaplotig	CDS	29000493	29000620	.	+	2	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 554 681 +
ChrX	stalkie_big_nohaplotig	CDS	29005170	29005344	.	+	0	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 682 856 +
ChrX	stalkie_big_nohaplotig	CDS	29008746	29008897	.	+	2	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 857 1008 +
ChrX	stalkie_big_nohaplotig	CDS	29010967	29011132	.	+	0	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 1009 1174 +
ChrX	stalkie_big_nohaplotig	CDS	29011633	29012102	.	+	2	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 1175 1644 +
ChrX	stalkie_big_nohaplotig	CDS	29012170	29012464	.	+	0	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 1645 1939 +
ChrX	stalkie_big_nohaplotig	CDS	29013724	29013876	.	+	2	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 1940 2092 +
ChrX	stalkie_big_nohaplotig	CDS	29013953	29014714	.	+	2	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 2093 2854 +
ChrX	stalkie_big_nohaplotig	CDS	29014777	29014933	.	+	2	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 2855 3011 +
ChrX	stalkie_big_nohaplotig	CDS	29017577	29017800	.	+	1	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 3012 3235 +
ChrX	stalkie_big_nohaplotig	CDS	29020293	29020888	.	+	2	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 3236 3831 +
ChrX	stalkie_big_nohaplotig	CDS	29022353	29022503	.	+	0	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 3832 3982 +
ChrX	stalkie_big_nohaplotig	CDS	29022611	29023104	.	+	2	Parent=FBgn0032006.1.mrna1;Target=FBgn0032006.1 3983 4476 +
ChrX	gffcl	locus	29023578	29024205	.	+	.	ID=RLOC_00001717;geneIDs=comp161935_c5_seq1.path1;transcripts=comp161935_c5_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29023578	29024205	.	+	.	ID=comp161935_c5_seq1.mrna1;geneID=comp161935_c5_seq1.path1;Name=comp161935_c5_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=627;mismatches=1;indels=0;unknowns=0;Target=comp161935_c5_seq1 628 1 .;CDS_Target=comp161935_c5_seq1 314 198 .;locus=RLOC_00001717
ChrX	stalkie_big_nohaplotig	exon	29023578	29024205	99	+	.	Parent=comp161935_c5_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29023775	29023891	.	+	0	Parent=comp161935_c5_seq1.mrna1
ChrX	gffcl	locus	29026109	29026754	.	+	.	ID=RLOC_00001718;geneIDs=comp153910_c0_seq1.path1;transcripts=comp153910_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29026109	29026754	.	+	.	ID=comp153910_c0_seq1.mrna1;geneID=comp153910_c0_seq1.path1;Name=comp153910_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=638;mismatches=6;indels=2;unknowns=0;Target=comp153910_c0_seq1 644 1 .;CDS_Target=comp153910_c0_seq1 253 176 .;locus=RLOC_00001718
ChrX	stalkie_big_nohaplotig	exon	29026109	29026754	98	+	.	Parent=comp153910_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29026286	29026363	.	+	0	Parent=comp153910_c0_seq1.mrna1
ChrX	gffcl	locus	29027904	29028642	.	-	.	ID=RLOC_00001719;geneIDs=comp153424_c0_seq1.path1;transcripts=comp153424_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29027904	29028642	.	-	.	ID=comp153424_c0_seq1.mrna1;geneID=comp153424_c0_seq1.path1;Name=comp153424_c0_seq1;Dir=antisensecoverage=96.0;identity=99.9;matches=674;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001719
ChrX	stalkie_big_nohaplotig	exon	29027904	29028081	100	-	.	Parent=comp153424_c0_seq1.mrna1;Target=comp153424_c0_seq1 22 199 -
ChrX	stalkie_big_nohaplotig	exon	29028146	29028642	99	-	.	Parent=comp153424_c0_seq1.mrna1;Target=comp153424_c0_seq1 200 696 -
ChrX	stalkie_big_nohaplotig	CDS	29027940	29028081	.	-	1	Parent=comp153424_c0_seq1.mrna1;Target=comp153424_c0_seq1 58 199 .
ChrX	stalkie_big_nohaplotig	CDS	29028146	29028468	.	-	0	Parent=comp153424_c0_seq1.mrna1;Target=comp153424_c0_seq1 200 522 .
ChrX	gffcl	locus	29030488	29031234	.	-	.	ID=RLOC_00001720;geneIDs=FBgn0260862.1.path1;transcripts=FBgn0260862.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29030488	29031234	.	-	.	ID=FBgn0260862.1.mrna1;geneID=FBgn0260862.1.path1;Name=FBgn0260862.1;Dir=sensecoverage=100.0;identity=100.0;matches=684;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001720
ChrX	stalkie_big_nohaplotig	exon	29030488	29031077	100	-	.	Parent=FBgn0260862.1.mrna1;Target=FBgn0260862.1 95 684 +
ChrX	stalkie_big_nohaplotig	exon	29031141	29031234	100	-	.	Parent=FBgn0260862.1.mrna1;Target=FBgn0260862.1 1 94 +
ChrX	stalkie_big_nohaplotig	CDS	29030488	29031077	.	-	2	Parent=FBgn0260862.1.mrna1;Target=FBgn0260862.1 95 684 +
ChrX	stalkie_big_nohaplotig	CDS	29031141	29031234	.	-	0	Parent=FBgn0260862.1.mrna1;Target=FBgn0260862.1 1 94 +
ChrX	gffcl	locus	29037057	29038101	.	+	.	ID=RLOC_00001721;geneIDs=comp59080_c0_seq1.path1;transcripts=comp59080_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29037057	29038101	.	+	.	ID=comp59080_c0_seq1.mrna1;geneID=comp59080_c0_seq1.path1;Name=comp59080_c0_seq1;Dir=sensecoverage=97.5;identity=100.0;matches=932;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001721
ChrX	stalkie_big_nohaplotig	exon	29037057	29037367	100	+	.	Parent=comp59080_c0_seq1.mrna1;Target=comp59080_c0_seq1 6 316 +
ChrX	stalkie_big_nohaplotig	exon	29037426	29037610	100	+	.	Parent=comp59080_c0_seq1.mrna1;Target=comp59080_c0_seq1 317 501 +
ChrX	stalkie_big_nohaplotig	exon	29037666	29038101	100	+	.	Parent=comp59080_c0_seq1.mrna1;Target=comp59080_c0_seq1 502 937 +
ChrX	stalkie_big_nohaplotig	CDS	29037059	29037367	.	+	0	Parent=comp59080_c0_seq1.mrna1;Target=comp59080_c0_seq1 8 316 +
ChrX	stalkie_big_nohaplotig	CDS	29037426	29037515	.	+	0	Parent=comp59080_c0_seq1.mrna1;Target=comp59080_c0_seq1 317 406 +
ChrX	gffcl	locus	29039848	29040843	.	+	.	ID=RLOC_00001722;geneIDs=FBgn0037686.1.path1;transcripts=FBgn0037686.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29039848	29040843	.	+	.	ID=FBgn0037686.1.mrna1;geneID=FBgn0037686.1.path1;Name=FBgn0037686.1;Dir=sensecoverage=100.0;identity=100.0;matches=513;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001722
ChrX	stalkie_big_nohaplotig	exon	29039848	29039902	100	+	.	Parent=FBgn0037686.1.mrna1;Target=FBgn0037686.1 1 55 +
ChrX	stalkie_big_nohaplotig	exon	29040143	29040212	100	+	.	Parent=FBgn0037686.1.mrna1;Target=FBgn0037686.1 56 125 +
ChrX	stalkie_big_nohaplotig	exon	29040456	29040843	100	+	.	Parent=FBgn0037686.1.mrna1;Target=FBgn0037686.1 126 513 +
ChrX	stalkie_big_nohaplotig	CDS	29039848	29039902	.	+	0	Parent=FBgn0037686.1.mrna1;Target=FBgn0037686.1 1 55 +
ChrX	stalkie_big_nohaplotig	CDS	29040143	29040212	.	+	2	Parent=FBgn0037686.1.mrna1;Target=FBgn0037686.1 56 125 +
ChrX	stalkie_big_nohaplotig	CDS	29040456	29040843	.	+	1	Parent=FBgn0037686.1.mrna1;Target=FBgn0037686.1 126 513 +
ChrX	gffcl	locus	29045753	29046723	.	-	.	ID=RLOC_00001723;geneIDs=comp152670_c0_seq1.path1;transcripts=comp152670_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29045753	29046723	.	-	.	ID=comp152670_c0_seq1.mrna1;geneID=comp152670_c0_seq1.path1;Name=comp152670_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.7;matches=971;mismatches=0;indels=3;unknowns=0;Target=comp152670_c0_seq1 980 7 .;CDS_Target=comp152670_c0_seq1 672 505 .;locus=RLOC_00001723
ChrX	stalkie_big_nohaplotig	exon	29045753	29046723	99	-	.	Parent=comp152670_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29046058	29046225	.	-	0	Parent=comp152670_c0_seq1.mrna1
ChrX	gffcl	locus	29048453	29054164	.	-	.	ID=RLOC_00001724;geneIDs=FBgn0031694.1.path1;transcripts=FBgn0031694.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29048453	29054164	.	-	.	ID=FBgn0031694.1.mrna1;geneID=FBgn0031694.1.path1;Name=FBgn0031694.1;Dir=sensecoverage=100.0;identity=100.0;matches=1587;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001724
ChrX	stalkie_big_nohaplotig	exon	29048453	29048607	100	-	.	Parent=FBgn0031694.1.mrna1;Target=FBgn0031694.1 1433 1587 +
ChrX	stalkie_big_nohaplotig	exon	29048671	29048982	100	-	.	Parent=FBgn0031694.1.mrna1;Target=FBgn0031694.1 1121 1432 +
ChrX	stalkie_big_nohaplotig	exon	29049489	29049706	100	-	.	Parent=FBgn0031694.1.mrna1;Target=FBgn0031694.1 903 1120 +
ChrX	stalkie_big_nohaplotig	exon	29050157	29050433	100	-	.	Parent=FBgn0031694.1.mrna1;Target=FBgn0031694.1 626 902 +
ChrX	stalkie_big_nohaplotig	exon	29050511	29050611	100	-	.	Parent=FBgn0031694.1.mrna1;Target=FBgn0031694.1 525 625 +
ChrX	stalkie_big_nohaplotig	exon	29053501	29053582	100	-	.	Parent=FBgn0031694.1.mrna1;Target=FBgn0031694.1 443 524 +
ChrX	stalkie_big_nohaplotig	exon	29053661	29053864	100	-	.	Parent=FBgn0031694.1.mrna1;Target=FBgn0031694.1 239 442 +
ChrX	stalkie_big_nohaplotig	exon	29053927	29054164	100	-	.	Parent=FBgn0031694.1.mrna1;Target=FBgn0031694.1 1 238 +
ChrX	stalkie_big_nohaplotig	CDS	29048453	29048607	.	-	2	Parent=FBgn0031694.1.mrna1;Target=FBgn0031694.1 1433 1587 +
ChrX	stalkie_big_nohaplotig	CDS	29048671	29048982	.	-	2	Parent=FBgn0031694.1.mrna1;Target=FBgn0031694.1 1121 1432 +
ChrX	stalkie_big_nohaplotig	CDS	29049489	29049706	.	-	1	Parent=FBgn0031694.1.mrna1;Target=FBgn0031694.1 903 1120 +
ChrX	stalkie_big_nohaplotig	CDS	29050157	29050433	.	-	2	Parent=FBgn0031694.1.mrna1;Target=FBgn0031694.1 626 902 +
ChrX	stalkie_big_nohaplotig	CDS	29050511	29050611	.	-	1	Parent=FBgn0031694.1.mrna1;Target=FBgn0031694.1 525 625 +
ChrX	stalkie_big_nohaplotig	CDS	29053501	29053582	.	-	2	Parent=FBgn0031694.1.mrna1;Target=FBgn0031694.1 443 524 +
ChrX	stalkie_big_nohaplotig	CDS	29053661	29053864	.	-	2	Parent=FBgn0031694.1.mrna1;Target=FBgn0031694.1 239 442 +
ChrX	stalkie_big_nohaplotig	CDS	29053927	29054164	.	-	0	Parent=FBgn0031694.1.mrna1;Target=FBgn0031694.1 1 238 +
ChrX	gffcl	locus	29081368	29081513	.	-	.	ID=RLOC_00001725;geneIDs=comp135128_c0_seq1.path10;transcripts=comp135128_c0_seq1.mrna10
ChrX	stalkie_big_nohaplotig	mRNA	29081368	29081513	.	-	.	ID=comp135128_c0_seq1.mrna10;geneID=comp135128_c0_seq1.path10;Name=comp135128_c0_seq1;Dir=indeterminatecoverage=46.9;identity=84.2;matches=123;mismatches=23;indels=0;unknowns=0;Target=comp135128_c0_seq1 309 164 .;CDS_Target=comp135128_c0_seq1 215 165 .;locus=RLOC_00001725
ChrX	stalkie_big_nohaplotig	exon	29081368	29081513	84	-	.	Parent=comp135128_c0_seq1.mrna10
ChrX	stalkie_big_nohaplotig	CDS	29081462	29081512	.	-	0	Parent=comp135128_c0_seq1.mrna10
ChrX	gffcl	locus	29107284	29107926	.	+	.	ID=RLOC_00001726;geneIDs=comp147614_c0_seq1.path2;transcripts=comp147614_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	29107284	29107926	.	+	.	ID=comp147614_c0_seq1.mrna2;geneID=comp147614_c0_seq1.path2;Name=comp147614_c0_seq1;Dir=sensecoverage=93.2;identity=99.7;matches=584;mismatches=2;indels=0;unknowns=0;Target=comp147614_c0_seq1 172 516 +;locus=RLOC_00001726
ChrX	stalkie_big_nohaplotig	exon	29107284	29107356	100	+	.	Parent=comp147614_c0_seq1.mrna2;Target=comp147614_c0_seq1 44 116 +
ChrX	stalkie_big_nohaplotig	exon	29107414	29107926	99	+	.	Parent=comp147614_c0_seq1.mrna2;Target=comp147614_c0_seq1 117 629 +
ChrX	stalkie_big_nohaplotig	CDS	29107469	29107813	.	+	0	Parent=comp147614_c0_seq1.mrna2
ChrX	gffcl	locus	29107977	29109433	.	-	.	ID=RLOC_00001727;geneIDs=comp156029_c0_seq1.path1;transcripts=comp156029_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29107977	29109433	.	-	.	ID=comp156029_c0_seq1.mrna1;geneID=comp156029_c0_seq1.path1;Name=comp156029_c0_seq1;Dir=antisensecoverage=99.2;identity=99.5;matches=1383;mismatches=7;indels=0;unknowns=0;Target=comp156029_c0_seq1 614 1225 .;locus=RLOC_00001727
ChrX	stalkie_big_nohaplotig	exon	29107977	29108243	98	-	.	Parent=comp156029_c0_seq1.mrna1;Target=comp156029_c0_seq1 11 277 -
ChrX	stalkie_big_nohaplotig	exon	29108311	29109433	99	-	.	Parent=comp156029_c0_seq1.mrna1;Target=comp156029_c0_seq1 278 1400 -
ChrX	stalkie_big_nohaplotig	CDS	29108647	29109258	.	-	0	Parent=comp156029_c0_seq1.mrna1
ChrX	gffcl	locus	29216136	29216641	.	-	.	ID=RLOC_00001728;geneIDs=comp116735_c0_seq1.path1;transcripts=comp116735_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29216136	29216641	.	-	.	ID=comp116735_c0_seq1.mrna1;geneID=comp116735_c0_seq1.path1;Name=comp116735_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=506;mismatches=0;indels=0;unknowns=0;Target=comp116735_c0_seq1 506 1 .;CDS_Target=comp116735_c0_seq1 506 267 .;locus=RLOC_00001728
ChrX	stalkie_big_nohaplotig	exon	29216136	29216641	100	-	.	Parent=comp116735_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29216136	29216375	.	-	0	Parent=comp116735_c0_seq1.mrna1
ChrX	gffcl	locus	29251695	29252583	.	-	.	ID=RLOC_00001730;geneIDs=comp147990_c0_seq1.path1;transcripts=comp147990_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29251695	29252583	.	-	.	ID=comp147990_c0_seq1.mrna1;geneID=comp147990_c0_seq1.path1;Name=comp147990_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.7;matches=886;mismatches=3;indels=0;unknowns=0;Target=comp147990_c0_seq1 904 16 .;CDS_Target=comp147990_c0_seq1 705 16 .;locus=RLOC_00001730
ChrX	stalkie_big_nohaplotig	exon	29251695	29252583	99	-	.	Parent=comp147990_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29251894	29252583	.	-	0	Parent=comp147990_c0_seq1.mrna1
ChrX	gffcl	locus	29254550	29261911	.	+	.	ID=RLOC_00001731;geneIDs=FBgn0011300.1.path1;transcripts=FBgn0011300.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29254550	29261911	.	+	.	ID=FBgn0011300.1.mrna1;geneID=FBgn0011300.1.path1;Name=FBgn0011300.1;Dir=indeterminatecoverage=1.9;identity=94.6;matches=35;mismatches=1;indels=1;unknowns=0;locus=RLOC_00001731
ChrX	stalkie_big_nohaplotig	exon	29254550	29254556	100	+	.	Parent=FBgn0011300.1.mrna1;Target=FBgn0011300.1 772 766 .
ChrX	stalkie_big_nohaplotig	exon	29255586	29255594	100	+	.	Parent=FBgn0011300.1.mrna1;Target=FBgn0011300.1 781 773 .
ChrX	stalkie_big_nohaplotig	exon	29258071	29258084	85	+	.	Parent=FBgn0011300.1.mrna1;Target=FBgn0011300.1 794 782 .
ChrX	stalkie_big_nohaplotig	exon	29261905	29261911	100	+	.	Parent=FBgn0011300.1.mrna1;Target=FBgn0011300.1 801 795 .
ChrX	stalkie_big_nohaplotig	CDS	29254552	29254556	.	+	0	Parent=FBgn0011300.1.mrna1;Target=FBgn0011300.1 772 768 .
ChrX	stalkie_big_nohaplotig	CDS	29255586	29255594	.	+	1	Parent=FBgn0011300.1.mrna1;Target=FBgn0011300.1 781 773 .
ChrX	stalkie_big_nohaplotig	CDS	29258071	29258084	.	+	1	Parent=FBgn0011300.1.mrna1;Target=FBgn0011300.1 794 782 .
ChrX	stalkie_big_nohaplotig	CDS	29261905	29261910	.	+	2	Parent=FBgn0011300.1.mrna1;Target=FBgn0011300.1 800 795 .
ChrX	gffcl	locus	29277963	29279234	.	-	.	ID=RLOC_00001732;geneIDs=comp145970_c0_seq1.path1;transcripts=comp145970_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29277963	29279234	.	-	.	ID=comp145970_c0_seq1.mrna1;geneID=comp145970_c0_seq1.path1;Name=comp145970_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1268;mismatches=3;indels=1;unknowns=0;Target=comp145970_c0_seq1 1271 1 .;CDS_Target=comp145970_c0_seq1 122 3 .;locus=RLOC_00001732
ChrX	stalkie_big_nohaplotig	exon	29277963	29279234	99	-	.	Parent=comp145970_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29279113	29279232	.	-	0	Parent=comp145970_c0_seq1.mrna1
ChrX	gffcl	locus	29281590	29282309	.	-	.	ID=RLOC_00001733;geneIDs=FBgn0002284.1.path1;transcripts=FBgn0002284.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29281590	29282309	.	-	.	ID=FBgn0002284.1.mrna1;geneID=FBgn0002284.1.path1;Name=FBgn0002284.1;Dir=sensecoverage=100.0;identity=99.7;matches=652;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001733
ChrX	stalkie_big_nohaplotig	exon	29281590	29282202	99	-	.	Parent=FBgn0002284.1.mrna1;Target=FBgn0002284.1 42 654 +
ChrX	stalkie_big_nohaplotig	exon	29282269	29282309	100	-	.	Parent=FBgn0002284.1.mrna1;Target=FBgn0002284.1 1 41 +
ChrX	stalkie_big_nohaplotig	CDS	29281590	29282202	.	-	1	Parent=FBgn0002284.1.mrna1;Target=FBgn0002284.1 42 654 +
ChrX	stalkie_big_nohaplotig	CDS	29282269	29282309	.	-	0	Parent=FBgn0002284.1.mrna1;Target=FBgn0002284.1 1 41 +
ChrX	gffcl	locus	29283763	29289563	.	-	.	ID=RLOC_00001734;geneIDs=FBgn0031692.1.path1;transcripts=FBgn0031692.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29283763	29289563	.	-	.	ID=FBgn0031692.1.mrna1;geneID=FBgn0031692.1.path1;Name=FBgn0031692.1;Dir=sensecoverage=100.0;identity=100.0;matches=456;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001734
ChrX	stalkie_big_nohaplotig	exon	29283763	29283788	100	-	.	Parent=FBgn0031692.1.mrna1;Target=FBgn0031692.1 431 456 +
ChrX	stalkie_big_nohaplotig	exon	29283856	29284273	100	-	.	Parent=FBgn0031692.1.mrna1;Target=FBgn0031692.1 13 430 +
ChrX	stalkie_big_nohaplotig	exon	29289552	29289563	100	-	.	Parent=FBgn0031692.1.mrna1;Target=FBgn0031692.1 1 12 +
ChrX	stalkie_big_nohaplotig	CDS	29283763	29283788	.	-	2	Parent=FBgn0031692.1.mrna1;Target=FBgn0031692.1 431 456 +
ChrX	stalkie_big_nohaplotig	CDS	29283856	29284273	.	-	0	Parent=FBgn0031692.1.mrna1;Target=FBgn0031692.1 13 430 +
ChrX	stalkie_big_nohaplotig	CDS	29289552	29289563	.	-	0	Parent=FBgn0031692.1.mrna1;Target=FBgn0031692.1 1 12 +
ChrX	gffcl	locus	29300442	29307183	.	-	.	ID=RLOC_00001735;geneIDs=FBgn0031690.1.path1;transcripts=FBgn0031690.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29300442	29307183	.	-	.	ID=FBgn0031690.1.mrna1;geneID=FBgn0031690.1.path1;Name=FBgn0031690.1;Dir=sensecoverage=99.5;identity=99.9;matches=1325;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001735
ChrX	stalkie_big_nohaplotig	exon	29300442	29300615	100	-	.	Parent=FBgn0031690.1.mrna1;Target=FBgn0031690.1 1159 1332 +
ChrX	stalkie_big_nohaplotig	exon	29301530	29301611	98	-	.	Parent=FBgn0031690.1.mrna1;Target=FBgn0031690.1 1077 1158 +
ChrX	stalkie_big_nohaplotig	exon	29302475	29302566	100	-	.	Parent=FBgn0031690.1.mrna1;Target=FBgn0031690.1 985 1076 +
ChrX	stalkie_big_nohaplotig	exon	29304019	29304128	100	-	.	Parent=FBgn0031690.1.mrna1;Target=FBgn0031690.1 875 984 +
ChrX	stalkie_big_nohaplotig	exon	29304281	29304548	100	-	.	Parent=FBgn0031690.1.mrna1;Target=FBgn0031690.1 607 874 +
ChrX	stalkie_big_nohaplotig	exon	29304615	29304803	100	-	.	Parent=FBgn0031690.1.mrna1;Target=FBgn0031690.1 418 606 +
ChrX	stalkie_big_nohaplotig	exon	29304870	29304930	100	-	.	Parent=FBgn0031690.1.mrna1;Target=FBgn0031690.1 357 417 +
ChrX	stalkie_big_nohaplotig	exon	29305512	29305614	100	-	.	Parent=FBgn0031690.1.mrna1;Target=FBgn0031690.1 254 356 +
ChrX	stalkie_big_nohaplotig	exon	29306758	29306938	100	-	.	Parent=FBgn0031690.1.mrna1;Target=FBgn0031690.1 73 253 +
ChrX	stalkie_big_nohaplotig	exon	29307118	29307183	100	-	.	Parent=FBgn0031690.1.mrna1;Target=FBgn0031690.1 7 72 +
ChrX	stalkie_big_nohaplotig	CDS	29300442	29300615	.	-	0	Parent=FBgn0031690.1.mrna1;Target=FBgn0031690.1 1159 1332 +
ChrX	stalkie_big_nohaplotig	CDS	29301530	29301611	.	-	1	Parent=FBgn0031690.1.mrna1;Target=FBgn0031690.1 1077 1158 +
ChrX	stalkie_big_nohaplotig	CDS	29302475	29302566	.	-	0	Parent=FBgn0031690.1.mrna1;Target=FBgn0031690.1 985 1076 +
ChrX	stalkie_big_nohaplotig	CDS	29304019	29304128	.	-	2	Parent=FBgn0031690.1.mrna1;Target=FBgn0031690.1 875 984 +
ChrX	stalkie_big_nohaplotig	CDS	29304281	29304548	.	-	0	Parent=FBgn0031690.1.mrna1;Target=FBgn0031690.1 607 874 +
ChrX	stalkie_big_nohaplotig	CDS	29304615	29304803	.	-	0	Parent=FBgn0031690.1.mrna1;Target=FBgn0031690.1 418 606 +
ChrX	stalkie_big_nohaplotig	CDS	29304870	29304930	.	-	1	Parent=FBgn0031690.1.mrna1;Target=FBgn0031690.1 357 417 +
ChrX	stalkie_big_nohaplotig	CDS	29305512	29305614	.	-	2	Parent=FBgn0031690.1.mrna1;Target=FBgn0031690.1 254 356 +
ChrX	stalkie_big_nohaplotig	CDS	29306758	29306938	.	-	0	Parent=FBgn0031690.1.mrna1;Target=FBgn0031690.1 73 253 +
ChrX	stalkie_big_nohaplotig	CDS	29307118	29307183	.	-	0	Parent=FBgn0031690.1.mrna1;Target=FBgn0031690.1 7 72 +
ChrX	gffcl	locus	29320678	29321904	.	-	.	ID=RLOC_00001736;geneIDs=FBgn0263594.4.path1;transcripts=FBgn0263594.4.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29320678	29321904	.	-	.	ID=FBgn0263594.4.mrna1;geneID=FBgn0263594.4.path1;Name=FBgn0263594.4;Dir=sensecoverage=99.5;identity=98.6;matches=1156;mismatches=17;indels=0;unknowns=0;locus=RLOC_00001736
ChrX	stalkie_big_nohaplotig	exon	29320678	29321788	98	-	.	Parent=FBgn0263594.4.mrna1;Target=FBgn0263594.4 63 1173 +
ChrX	stalkie_big_nohaplotig	exon	29321843	29321904	100	-	.	Parent=FBgn0263594.4.mrna1;Target=FBgn0263594.4 1 62 +
ChrX	stalkie_big_nohaplotig	CDS	29320678	29321788	.	-	1	Parent=FBgn0263594.4.mrna1;Target=FBgn0263594.4 63 1173 +
ChrX	stalkie_big_nohaplotig	CDS	29321843	29321904	.	-	0	Parent=FBgn0263594.4.mrna1;Target=FBgn0263594.4 1 62 +
ChrX	gffcl	locus	29338403	29903177	.	-	.	ID=RLOC_00001737;geneIDs=FBgn0031660.1.path1,FBgn0083962.1.path1,comp159416_c0_seq1.path1;transcripts=FBgn0083962.1.mrna1,comp159416_c0_seq1.mrna1,FBgn0031660.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29338403	29367338	.	-	.	ID=FBgn0083962.1.mrna1;geneID=FBgn0083962.1.path1;Name=FBgn0083962.1;Dir=sensecoverage=98.1;identity=100.0;matches=4265;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001737
ChrX	stalkie_big_nohaplotig	exon	29338403	29338595	100	-	.	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 4133 4325 +
ChrX	stalkie_big_nohaplotig	exon	29338658	29338805	100	-	.	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 3985 4132 +
ChrX	stalkie_big_nohaplotig	exon	29345610	29345733	100	-	.	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 3861 3984 +
ChrX	stalkie_big_nohaplotig	exon	29346076	29346218	100	-	.	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 3718 3860 +
ChrX	stalkie_big_nohaplotig	exon	29353128	29353148	100	-	.	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 3697 3717 +
ChrX	stalkie_big_nohaplotig	exon	29355536	29355650	100	-	.	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 3582 3696 +
ChrX	stalkie_big_nohaplotig	exon	29355719	29355883	100	-	.	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 3417 3581 +
ChrX	stalkie_big_nohaplotig	exon	29357073	29357262	100	-	.	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 3227 3416 +
ChrX	stalkie_big_nohaplotig	exon	29357334	29357506	100	-	.	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 3054 3226 +
ChrX	stalkie_big_nohaplotig	exon	29357590	29357725	100	-	.	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 2918 3053 +
ChrX	stalkie_big_nohaplotig	exon	29360915	29361074	100	-	.	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 2758 2917 +
ChrX	stalkie_big_nohaplotig	exon	29361145	29362247	100	-	.	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 1655 2757 +
ChrX	stalkie_big_nohaplotig	exon	29362327	29362419	100	-	.	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 1562 1654 +
ChrX	stalkie_big_nohaplotig	exon	29364142	29364554	100	-	.	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 1149 1561 +
ChrX	stalkie_big_nohaplotig	exon	29364613	29364733	100	-	.	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 1028 1148 +
ChrX	stalkie_big_nohaplotig	exon	29365943	29366105	100	-	.	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 865 1027 +
ChrX	stalkie_big_nohaplotig	exon	29366166	29366558	100	-	.	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 472 864 +
ChrX	stalkie_big_nohaplotig	exon	29366855	29367061	100	-	.	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 265 471 +
ChrX	stalkie_big_nohaplotig	exon	29367134	29367338	99	-	.	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 60 264 +
ChrX	stalkie_big_nohaplotig	CDS	29338405	29338595	.	-	2	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 4133 4323 +
ChrX	stalkie_big_nohaplotig	CDS	29338658	29338805	.	-	0	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 3985 4132 +
ChrX	stalkie_big_nohaplotig	CDS	29345610	29345733	.	-	1	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 3861 3984 +
ChrX	stalkie_big_nohaplotig	CDS	29346076	29346218	.	-	0	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 3718 3860 +
ChrX	stalkie_big_nohaplotig	CDS	29353128	29353148	.	-	0	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 3697 3717 +
ChrX	stalkie_big_nohaplotig	CDS	29355536	29355650	.	-	1	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 3582 3696 +
ChrX	stalkie_big_nohaplotig	CDS	29355719	29355883	.	-	1	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 3417 3581 +
ChrX	stalkie_big_nohaplotig	CDS	29357073	29357262	.	-	2	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 3227 3416 +
ChrX	stalkie_big_nohaplotig	CDS	29357334	29357506	.	-	1	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 3054 3226 +
ChrX	stalkie_big_nohaplotig	CDS	29357590	29357725	.	-	2	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 2918 3053 +
ChrX	stalkie_big_nohaplotig	CDS	29360915	29361074	.	-	0	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 2758 2917 +
ChrX	stalkie_big_nohaplotig	CDS	29361145	29362247	.	-	2	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 1655 2757 +
ChrX	stalkie_big_nohaplotig	CDS	29362327	29362419	.	-	2	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 1562 1654 +
ChrX	stalkie_big_nohaplotig	CDS	29364142	29364554	.	-	1	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 1149 1561 +
ChrX	stalkie_big_nohaplotig	CDS	29364613	29364733	.	-	2	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 1028 1148 +
ChrX	stalkie_big_nohaplotig	CDS	29365943	29366105	.	-	0	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 865 1027 +
ChrX	stalkie_big_nohaplotig	CDS	29366166	29366558	.	-	0	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 472 864 +
ChrX	stalkie_big_nohaplotig	CDS	29366855	29367061	.	-	0	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 265 471 +
ChrX	stalkie_big_nohaplotig	CDS	29367134	29367337	.	-	0	Parent=FBgn0083962.1.mrna1;Target=FBgn0083962.1 61 264 +
ChrX	stalkie_big_nohaplotig	mRNA	29344853	29903177	.	-	.	ID=comp159416_c0_seq1.mrna1;geneID=comp159416_c0_seq1.path1;Name=comp159416_c0_seq1;Dir=indeterminatecoverage=77.0;identity=90.8;matches=1323;mismatches=71;indels=63;unknowns=0;Target=comp159416_c0_seq1 87 73 .;locus=RLOC_00001737
ChrX	stalkie_big_nohaplotig	exon	29344853	29344860	75	-	.	Parent=comp159416_c0_seq1.mrna1;Target=comp159416_c0_seq1 1523 1517 .
ChrX	stalkie_big_nohaplotig	exon	29345023	29345032	100	-	.	Parent=comp159416_c0_seq1.mrna1;Target=comp159416_c0_seq1 1513 1504 .
ChrX	stalkie_big_nohaplotig	exon	29347154	29347175	81	-	.	Parent=comp159416_c0_seq1.mrna1;Target=comp159416_c0_seq1 1503 1483 .
ChrX	stalkie_big_nohaplotig	exon	29347331	29347355	52	-	.	Parent=comp159416_c0_seq1.mrna1;Target=comp159416_c0_seq1 1482 1443 .
ChrX	stalkie_big_nohaplotig	exon	29353676	29353694	73	-	.	Parent=comp159416_c0_seq1.mrna1;Target=comp159416_c0_seq1 1442 1424 .
ChrX	stalkie_big_nohaplotig	exon	29355220	29355226	100	-	.	Parent=comp159416_c0_seq1.mrna1;Target=comp159416_c0_seq1 1423 1417 .
ChrX	stalkie_big_nohaplotig	exon	29357282	29357345	47	-	.	Parent=comp159416_c0_seq1.mrna1;Target=comp159416_c0_seq1 1416 1349 .
ChrX	stalkie_big_nohaplotig	exon	29368661	29368669	100	-	.	Parent=comp159416_c0_seq1.mrna1;Target=comp159416_c0_seq1 1348 1340 .
ChrX	stalkie_big_nohaplotig	exon	29375265	29375267	100	-	.	Parent=comp159416_c0_seq1.mrna1;Target=comp159416_c0_seq1 1339 1337 .
ChrX	stalkie_big_nohaplotig	exon	29382368	29382372	100	-	.	Parent=comp159416_c0_seq1.mrna1;Target=comp159416_c0_seq1 1336 1332 .
ChrX	stalkie_big_nohaplotig	exon	29389710	29389717	100	-	.	Parent=comp159416_c0_seq1.mrna1;Target=comp159416_c0_seq1 1331 1324 .
ChrX	stalkie_big_nohaplotig	exon	29396190	29396193	100	-	.	Parent=comp159416_c0_seq1.mrna1;Target=comp159416_c0_seq1 1323 1320 .
ChrX	stalkie_big_nohaplotig	exon	29397891	29397896	100	-	.	Parent=comp159416_c0_seq1.mrna1;Target=comp159416_c0_seq1 1319 1314 .
ChrX	stalkie_big_nohaplotig	exon	29398169	29398197	40	-	.	Parent=comp159416_c0_seq1.mrna1;Target=comp159416_c0_seq1 1313 1254 .
ChrX	stalkie_big_nohaplotig	exon	29408025	29408034	100	-	.	Parent=comp159416_c0_seq1.mrna1;Target=comp159416_c0_seq1 1253 1244 .
ChrX	stalkie_big_nohaplotig	exon	29413230	29413241	83	-	.	Parent=comp159416_c0_seq1.mrna1;Target=comp159416_c0_seq1 1243 1232 .
ChrX	stalkie_big_nohaplotig	exon	29425663	29425665	100	-	.	Parent=comp159416_c0_seq1.mrna1;Target=comp159416_c0_seq1 1231 1229 .
ChrX	stalkie_big_nohaplotig	exon	29429740	29429750	100	-	.	Parent=comp159416_c0_seq1.mrna1;Target=comp159416_c0_seq1 1228 1218 .
ChrX	stalkie_big_nohaplotig	exon	29430400	29430404	100	-	.	Parent=comp159416_c0_seq1.mrna1;Target=comp159416_c0_seq1 1217 1213 .
ChrX	stalkie_big_nohaplotig	exon	29438542	29438547	66	-	.	Parent=comp159416_c0_seq1.mrna1;Target=comp159416_c0_seq1 1212 1207 .
ChrX	stalkie_big_nohaplotig	exon	29462619	29462622	100	-	.	Parent=comp159416_c0_seq1.mrna1;Target=comp159416_c0_seq1 1206 1203 .
ChrX	stalkie_big_nohaplotig	exon	29902047	29903177	97	-	.	Parent=comp159416_c0_seq1.mrna1;Target=comp159416_c0_seq1 1202 71 .
ChrX	stalkie_big_nohaplotig	CDS	29903161	29903175	.	-	0	Parent=comp159416_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29438064	29440459	.	-	.	ID=FBgn0031660.1.mrna1;geneID=FBgn0031660.1.path1;Name=FBgn0031660.1;Dir=sensecoverage=100.0;identity=99.9;matches=965;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001737
ChrX	stalkie_big_nohaplotig	exon	29438064	29438139	100	-	.	Parent=FBgn0031660.1.mrna1;Target=FBgn0031660.1 891 966 +
ChrX	stalkie_big_nohaplotig	exon	29438222	29438484	100	-	.	Parent=FBgn0031660.1.mrna1;Target=FBgn0031660.1 628 890 +
ChrX	stalkie_big_nohaplotig	exon	29438546	29438692	100	-	.	Parent=FBgn0031660.1.mrna1;Target=FBgn0031660.1 481 627 +
ChrX	stalkie_big_nohaplotig	exon	29439878	29440312	99	-	.	Parent=FBgn0031660.1.mrna1;Target=FBgn0031660.1 46 480 +
ChrX	stalkie_big_nohaplotig	exon	29440415	29440459	100	-	.	Parent=FBgn0031660.1.mrna1;Target=FBgn0031660.1 1 45 +
ChrX	stalkie_big_nohaplotig	CDS	29438064	29438139	.	-	1	Parent=FBgn0031660.1.mrna1;Target=FBgn0031660.1 891 966 +
ChrX	stalkie_big_nohaplotig	CDS	29438222	29438484	.	-	0	Parent=FBgn0031660.1.mrna1;Target=FBgn0031660.1 628 890 +
ChrX	stalkie_big_nohaplotig	CDS	29438546	29438692	.	-	0	Parent=FBgn0031660.1.mrna1;Target=FBgn0031660.1 481 627 +
ChrX	stalkie_big_nohaplotig	CDS	29439878	29440312	.	-	0	Parent=FBgn0031660.1.mrna1;Target=FBgn0031660.1 46 480 +
ChrX	stalkie_big_nohaplotig	CDS	29440415	29440459	.	-	0	Parent=FBgn0031660.1.mrna1;Target=FBgn0031660.1 1 45 +
ChrX	gffcl	locus	29408464	29409993	.	+	.	ID=RLOC_00001738;geneIDs=FBgn0031664.1.path1;transcripts=FBgn0031664.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29408464	29409993	.	+	.	ID=FBgn0031664.1.mrna1;geneID=FBgn0031664.1.path1;Name=FBgn0031664.1;Dir=sensecoverage=100.0;identity=100.0;matches=1467;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001738
ChrX	stalkie_big_nohaplotig	exon	29408464	29409168	100	+	.	Parent=FBgn0031664.1.mrna1;Target=FBgn0031664.1 1 705 +
ChrX	stalkie_big_nohaplotig	exon	29409232	29409993	100	+	.	Parent=FBgn0031664.1.mrna1;Target=FBgn0031664.1 706 1467 +
ChrX	stalkie_big_nohaplotig	CDS	29408464	29409168	.	+	0	Parent=FBgn0031664.1.mrna1;Target=FBgn0031664.1 1 705 +
ChrX	stalkie_big_nohaplotig	CDS	29409232	29409993	.	+	0	Parent=FBgn0031664.1.mrna1;Target=FBgn0031664.1 706 1467 +
ChrX	gffcl	locus	29413426	29414050	.	+	.	ID=RLOC_00001739;geneIDs=FBgn0031663.1.path1;transcripts=FBgn0031663.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29413426	29414050	.	+	.	ID=FBgn0031663.1.mrna1;geneID=FBgn0031663.1.path1;Name=FBgn0031663.1;Dir=sensecoverage=100.0;identity=99.6;matches=565;mismatches=1;indels=1;unknowns=0;Target=FBgn0031663.1 3 116 +;locus=RLOC_00001739
ChrX	stalkie_big_nohaplotig	exon	29413426	29413671	99	+	.	Parent=FBgn0031663.1.mrna1;Target=FBgn0031663.1 1 247 +
ChrX	stalkie_big_nohaplotig	exon	29413731	29414050	100	+	.	Parent=FBgn0031663.1.mrna1;Target=FBgn0031663.1 248 567 +
ChrX	stalkie_big_nohaplotig	CDS	29413428	29413540	.	+	0	Parent=FBgn0031663.1.mrna1
ChrX	gffcl	locus	29415008	29415829	.	-	.	ID=RLOC_00001740;geneIDs=FBgn0031662.1.path1;transcripts=FBgn0031662.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29415008	29415829	.	-	.	ID=FBgn0031662.1.mrna1;geneID=FBgn0031662.1.path1;Name=FBgn0031662.1;Dir=sensecoverage=100.0;identity=100.0;matches=735;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001740
ChrX	stalkie_big_nohaplotig	exon	29415008	29415648	100	-	.	Parent=FBgn0031662.1.mrna1;Target=FBgn0031662.1 95 735 +
ChrX	stalkie_big_nohaplotig	exon	29415736	29415829	100	-	.	Parent=FBgn0031662.1.mrna1;Target=FBgn0031662.1 1 94 +
ChrX	stalkie_big_nohaplotig	CDS	29415008	29415648	.	-	2	Parent=FBgn0031662.1.mrna1;Target=FBgn0031662.1 95 735 +
ChrX	stalkie_big_nohaplotig	CDS	29415736	29415829	.	-	0	Parent=FBgn0031662.1.mrna1;Target=FBgn0031662.1 1 94 +
ChrX	gffcl	locus	29418325	29419191	.	-	.	ID=RLOC_00001741;geneIDs=FBgn0031662.2.path1;transcripts=FBgn0031662.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29418325	29419191	.	-	.	ID=FBgn0031662.2.mrna1;geneID=FBgn0031662.2.path1;Name=FBgn0031662.2;Dir=sensecoverage=100.0;identity=100.0;matches=795;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001741
ChrX	stalkie_big_nohaplotig	exon	29418325	29419028	100	-	.	Parent=FBgn0031662.2.mrna1;Target=FBgn0031662.2 92 795 +
ChrX	stalkie_big_nohaplotig	exon	29419101	29419191	100	-	.	Parent=FBgn0031662.2.mrna1;Target=FBgn0031662.2 1 91 +
ChrX	stalkie_big_nohaplotig	CDS	29418325	29419028	.	-	2	Parent=FBgn0031662.2.mrna1;Target=FBgn0031662.2 92 795 +
ChrX	stalkie_big_nohaplotig	CDS	29419101	29419191	.	-	0	Parent=FBgn0031662.2.mrna1;Target=FBgn0031662.2 1 91 +
ChrX	gffcl	locus	29421335	29422516	.	-	.	ID=RLOC_00001742;geneIDs=comp157244_c6_seq1.path1;transcripts=comp157244_c6_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29421335	29422516	.	-	.	ID=comp157244_c6_seq1.mrna1;geneID=comp157244_c6_seq1.path1;Name=comp157244_c6_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=1148;mismatches=1;indels=33;unknowns=0;Target=comp157244_c6_seq1 1149 1 .;CDS_Target=comp157244_c6_seq1 615 535 .;locus=RLOC_00001742
ChrX	stalkie_big_nohaplotig	exon	29421335	29422516	97	-	.	Parent=comp157244_c6_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29421869	29421982	.	-	0	Parent=comp157244_c6_seq1.mrna1
ChrX	gffcl	locus	29423859	29427832	.	-	.	ID=RLOC_00001743;geneIDs=FBgn0020407.1.path1;transcripts=FBgn0020407.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29423859	29427832	.	-	.	ID=FBgn0020407.1.mrna1;geneID=FBgn0020407.1.path1;Name=FBgn0020407.1;Dir=sensecoverage=100.0;identity=100.0;matches=2001;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001743
ChrX	stalkie_big_nohaplotig	exon	29423859	29423997	100	-	.	Parent=FBgn0020407.1.mrna1;Target=FBgn0020407.1 1863 2001 +
ChrX	stalkie_big_nohaplotig	exon	29424123	29424222	100	-	.	Parent=FBgn0020407.1.mrna1;Target=FBgn0020407.1 1763 1862 +
ChrX	stalkie_big_nohaplotig	exon	29425224	29425384	100	-	.	Parent=FBgn0020407.1.mrna1;Target=FBgn0020407.1 1602 1762 +
ChrX	stalkie_big_nohaplotig	exon	29426104	29426559	100	-	.	Parent=FBgn0020407.1.mrna1;Target=FBgn0020407.1 1146 1601 +
ChrX	stalkie_big_nohaplotig	exon	29426616	29426908	100	-	.	Parent=FBgn0020407.1.mrna1;Target=FBgn0020407.1 853 1145 +
ChrX	stalkie_big_nohaplotig	exon	29426981	29427832	100	-	.	Parent=FBgn0020407.1.mrna1;Target=FBgn0020407.1 1 852 +
ChrX	stalkie_big_nohaplotig	CDS	29423859	29423997	.	-	1	Parent=FBgn0020407.1.mrna1;Target=FBgn0020407.1 1863 2001 +
ChrX	stalkie_big_nohaplotig	CDS	29424123	29424222	.	-	2	Parent=FBgn0020407.1.mrna1;Target=FBgn0020407.1 1763 1862 +
ChrX	stalkie_big_nohaplotig	CDS	29425224	29425384	.	-	1	Parent=FBgn0020407.1.mrna1;Target=FBgn0020407.1 1602 1762 +
ChrX	stalkie_big_nohaplotig	CDS	29426104	29426559	.	-	1	Parent=FBgn0020407.1.mrna1;Target=FBgn0020407.1 1146 1601 +
ChrX	stalkie_big_nohaplotig	CDS	29426616	29426908	.	-	0	Parent=FBgn0020407.1.mrna1;Target=FBgn0020407.1 853 1145 +
ChrX	stalkie_big_nohaplotig	CDS	29426981	29427832	.	-	0	Parent=FBgn0020407.1.mrna1;Target=FBgn0020407.1 1 852 +
ChrX	gffcl	locus	29429519	29434489	.	+	.	ID=RLOC_00001744;geneIDs=FBgn0031661.1.path1;transcripts=FBgn0031661.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29429519	29434489	.	+	.	ID=FBgn0031661.1.mrna1;geneID=FBgn0031661.1.path1;Name=FBgn0031661.1;Dir=sensecoverage=100.0;identity=100.0;matches=1146;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001744
ChrX	stalkie_big_nohaplotig	exon	29429519	29429650	100	+	.	Parent=FBgn0031661.1.mrna1;Target=FBgn0031661.1 1 132 +
ChrX	stalkie_big_nohaplotig	exon	29433279	29433714	100	+	.	Parent=FBgn0031661.1.mrna1;Target=FBgn0031661.1 133 568 +
ChrX	stalkie_big_nohaplotig	exon	29433912	29434489	100	+	.	Parent=FBgn0031661.1.mrna1;Target=FBgn0031661.1 569 1146 +
ChrX	stalkie_big_nohaplotig	CDS	29429519	29429650	.	+	0	Parent=FBgn0031661.1.mrna1;Target=FBgn0031661.1 1 132 +
ChrX	stalkie_big_nohaplotig	CDS	29433279	29433714	.	+	0	Parent=FBgn0031661.1.mrna1;Target=FBgn0031661.1 133 568 +
ChrX	stalkie_big_nohaplotig	CDS	29433912	29434489	.	+	2	Parent=FBgn0031661.1.mrna1;Target=FBgn0031661.1 569 1146 +
ChrX	gffcl	locus	29434730	29436874	.	+	.	ID=RLOC_00001745;geneIDs=comp159312_c0_seq1.path1;transcripts=comp159312_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29434730	29436874	.	+	.	ID=comp159312_c0_seq1.mrna1;geneID=comp159312_c0_seq1.path1;Name=comp159312_c0_seq1;Dir=indeterminatecoverage=96.2;identity=99.8;matches=1900;mismatches=3;indels=1;unknowns=0;Target=comp159312_c0_seq1 198 76 .;locus=RLOC_00001745
ChrX	stalkie_big_nohaplotig	exon	29434730	29436173	100	+	.	Parent=comp159312_c0_seq1.mrna1;Target=comp159312_c0_seq1 1519 76 .
ChrX	stalkie_big_nohaplotig	exon	29436416	29436874	99	+	.	Parent=comp159312_c0_seq1.mrna1;Target=comp159312_c0_seq1 1979 1520 .
ChrX	stalkie_big_nohaplotig	CDS	29434730	29434852	.	+	0	Parent=comp159312_c0_seq1.mrna1
ChrX	gffcl	locus	29436846	29504518	.	.	.	ID=RLOC_00001746;geneIDs=comp155323_c2_seq1.path1,comp159161_c0_seq1.path1;transcripts=comp155323_c2_seq1.mrna1,comp159161_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29436846	29504518	.	-	.	ID=comp155323_c2_seq1.mrna1;geneID=comp155323_c2_seq1.path1;Name=comp155323_c2_seq1;Dir=indeterminatecoverage=77.4;identity=99.5;matches=1143;mismatches=3;indels=3;unknowns=0;locus=RLOC_00001746
ChrX	stalkie_big_nohaplotig	exon	29436846	29437966	99	-	.	Parent=comp155323_c2_seq1.mrna1;Target=comp155323_c2_seq1 1445 322 .
ChrX	stalkie_big_nohaplotig	exon	29442345	29442353	100	-	.	Parent=comp155323_c2_seq1.mrna1;Target=comp155323_c2_seq1 321 313 .
ChrX	stalkie_big_nohaplotig	exon	29443590	29443593	100	-	.	Parent=comp155323_c2_seq1.mrna1;Target=comp155323_c2_seq1 312 309 .
ChrX	stalkie_big_nohaplotig	exon	29457546	29457550	100	-	.	Parent=comp155323_c2_seq1.mrna1;Target=comp155323_c2_seq1 308 304 .
ChrX	stalkie_big_nohaplotig	exon	29504512	29504518	100	-	.	Parent=comp155323_c2_seq1.mrna1;Target=comp155323_c2_seq1 303 297 .
ChrX	stalkie_big_nohaplotig	CDS	29437841	29437966	.	-	0	Parent=comp155323_c2_seq1.mrna1;Target=comp155323_c2_seq1 447 322 .
ChrX	stalkie_big_nohaplotig	CDS	29442345	29442353	.	-	0	Parent=comp155323_c2_seq1.mrna1;Target=comp155323_c2_seq1 321 313 .
ChrX	stalkie_big_nohaplotig	CDS	29443590	29443593	.	-	1	Parent=comp155323_c2_seq1.mrna1;Target=comp155323_c2_seq1 312 309 .
ChrX	stalkie_big_nohaplotig	CDS	29457546	29457550	.	-	0	Parent=comp155323_c2_seq1.mrna1;Target=comp155323_c2_seq1 308 304 .
ChrX	stalkie_big_nohaplotig	CDS	29504512	29504517	.	-	0	Parent=comp155323_c2_seq1.mrna1;Target=comp155323_c2_seq1 303 298 .
ChrX	stalkie_big_nohaplotig	mRNA	29443198	29444059	.	+	.	ID=comp159161_c0_seq1.mrna1;geneID=comp159161_c0_seq1.path1;Name=comp159161_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=861;mismatches=1;indels=0;unknowns=0;Target=comp159161_c0_seq1 862 1 .;CDS_Target=comp159161_c0_seq1 320 180 .;locus=RLOC_00001746
ChrX	stalkie_big_nohaplotig	exon	29443198	29444059	99	+	.	Parent=comp159161_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29443377	29443517	.	+	0	Parent=comp159161_c0_seq1.mrna1
ChrX	gffcl	locus	29446362	29447324	.	-	.	ID=RLOC_00001747;geneIDs=comp153677_c0_seq1.path1;transcripts=comp153677_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29446362	29447324	.	-	.	ID=comp153677_c0_seq1.mrna1;geneID=comp153677_c0_seq1.path1;Name=comp153677_c0_seq1;Dir=indeterminatecoverage=94.5;identity=93.7;matches=946;mismatches=15;indels=49;unknowns=0;Target=comp153677_c0_seq1 1067 60 .;CDS_Target=comp153677_c0_seq1 239 60 .;locus=RLOC_00001747
ChrX	stalkie_big_nohaplotig	exon	29446362	29447324	93	-	.	Parent=comp153677_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29447145	29447324	.	-	0	Parent=comp153677_c0_seq1.mrna1
ChrX	gffcl	locus	29465782	29466542	.	-	.	ID=RLOC_00001748;geneIDs=FBgn0035155.1.path1;transcripts=FBgn0035155.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29465782	29466542	.	-	.	ID=FBgn0035155.1.mrna1;geneID=FBgn0035155.1.path1;Name=FBgn0035155.1;Dir=sensecoverage=100.0;identity=100.0;matches=696;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001748
ChrX	stalkie_big_nohaplotig	exon	29465782	29466234	100	-	.	Parent=FBgn0035155.1.mrna1;Target=FBgn0035155.1 244 696 +
ChrX	stalkie_big_nohaplotig	exon	29466300	29466542	100	-	.	Parent=FBgn0035155.1.mrna1;Target=FBgn0035155.1 1 243 +
ChrX	stalkie_big_nohaplotig	CDS	29465782	29466234	.	-	0	Parent=FBgn0035155.1.mrna1;Target=FBgn0035155.1 244 696 +
ChrX	stalkie_big_nohaplotig	CDS	29466300	29466542	.	-	0	Parent=FBgn0035155.1.mrna1;Target=FBgn0035155.1 1 243 +
ChrX	gffcl	locus	29474500	29479498	.	+	.	ID=RLOC_00001749;geneIDs=FBgn0035154.1.path1;transcripts=FBgn0035154.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29474500	29479498	.	+	.	ID=FBgn0035154.1.mrna1;geneID=FBgn0035154.1.path1;Name=FBgn0035154.1;Dir=sensecoverage=100.0;identity=100.0;matches=1377;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001749
ChrX	stalkie_big_nohaplotig	exon	29474500	29474602	100	+	.	Parent=FBgn0035154.1.mrna1;Target=FBgn0035154.1 1 103 +
ChrX	stalkie_big_nohaplotig	exon	29477978	29478552	100	+	.	Parent=FBgn0035154.1.mrna1;Target=FBgn0035154.1 104 678 +
ChrX	stalkie_big_nohaplotig	exon	29478639	29478858	100	+	.	Parent=FBgn0035154.1.mrna1;Target=FBgn0035154.1 679 898 +
ChrX	stalkie_big_nohaplotig	exon	29478948	29479133	100	+	.	Parent=FBgn0035154.1.mrna1;Target=FBgn0035154.1 899 1084 +
ChrX	stalkie_big_nohaplotig	exon	29479206	29479498	100	+	.	Parent=FBgn0035154.1.mrna1;Target=FBgn0035154.1 1085 1377 +
ChrX	stalkie_big_nohaplotig	CDS	29474500	29474602	.	+	0	Parent=FBgn0035154.1.mrna1;Target=FBgn0035154.1 1 103 +
ChrX	stalkie_big_nohaplotig	CDS	29477978	29478552	.	+	2	Parent=FBgn0035154.1.mrna1;Target=FBgn0035154.1 104 678 +
ChrX	stalkie_big_nohaplotig	CDS	29478639	29478858	.	+	0	Parent=FBgn0035154.1.mrna1;Target=FBgn0035154.1 679 898 +
ChrX	stalkie_big_nohaplotig	CDS	29478948	29479133	.	+	2	Parent=FBgn0035154.1.mrna1;Target=FBgn0035154.1 899 1084 +
ChrX	stalkie_big_nohaplotig	CDS	29479206	29479498	.	+	2	Parent=FBgn0035154.1.mrna1;Target=FBgn0035154.1 1085 1377 +
ChrX	gffcl	locus	29481468	29482394	.	-	.	ID=RLOC_00001750;geneIDs=comp149049_c0_seq1.path1;transcripts=comp149049_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29481468	29482394	.	-	.	ID=comp149049_c0_seq1.mrna1;geneID=comp149049_c0_seq1.path1;Name=comp149049_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=927;mismatches=0;indels=0;unknowns=0;Target=comp149049_c0_seq1 929 3 .;CDS_Target=comp149049_c0_seq1 483 289 .;locus=RLOC_00001750
ChrX	stalkie_big_nohaplotig	exon	29481468	29482394	100	-	.	Parent=comp149049_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29481914	29482108	.	-	0	Parent=comp149049_c0_seq1.mrna1
ChrX	gffcl	locus	29482801	29484069	.	-	.	ID=RLOC_00001751;geneIDs=comp152816_c0_seq1.path1;transcripts=comp152816_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29482801	29484069	.	-	.	ID=comp152816_c0_seq1.mrna1;geneID=comp152816_c0_seq1.path1;Name=comp152816_c0_seq1;Dir=antisensecoverage=96.2;identity=93.4;matches=694;mismatches=14;indels=35;unknowns=0;Target=comp152816_c0_seq1 332 532 .;locus=RLOC_00001751
ChrX	stalkie_big_nohaplotig	exon	29482801	29483005	81	-	.	Parent=comp152816_c0_seq1.mrna1;Target=comp152816_c0_seq1 22 261 -
ChrX	stalkie_big_nohaplotig	exon	29483066	29483363	99	-	.	Parent=comp152816_c0_seq1.mrna1;Target=comp152816_c0_seq1 262 559 -
ChrX	stalkie_big_nohaplotig	exon	29483562	29483696	100	-	.	Parent=comp152816_c0_seq1.mrna1;Target=comp152816_c0_seq1 560 694 -
ChrX	stalkie_big_nohaplotig	exon	29484000	29484069	95	-	.	Parent=comp152816_c0_seq1.mrna1;Target=comp152816_c0_seq1 695 764 -
ChrX	stalkie_big_nohaplotig	CDS	29483136	29483336	.	-	0	Parent=comp152816_c0_seq1.mrna1
ChrX	gffcl	locus	29508813	29535728	.	-	.	ID=RLOC_00001752;geneIDs=FBgn0031299.1.path1;transcripts=FBgn0031299.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29508813	29535728	.	-	.	ID=FBgn0031299.1.mrna1;geneID=FBgn0031299.1.path1;Name=FBgn0031299.1;Dir=sensecoverage=100.0;identity=100.0;matches=1677;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001752
ChrX	stalkie_big_nohaplotig	exon	29508813	29509594	100	-	.	Parent=FBgn0031299.1.mrna1;Target=FBgn0031299.1 896 1677 +
ChrX	stalkie_big_nohaplotig	exon	29509668	29509910	100	-	.	Parent=FBgn0031299.1.mrna1;Target=FBgn0031299.1 653 895 +
ChrX	stalkie_big_nohaplotig	exon	29515927	29516035	100	-	.	Parent=FBgn0031299.1.mrna1;Target=FBgn0031299.1 544 652 +
ChrX	stalkie_big_nohaplotig	exon	29516597	29516753	100	-	.	Parent=FBgn0031299.1.mrna1;Target=FBgn0031299.1 387 543 +
ChrX	stalkie_big_nohaplotig	exon	29517242	29517353	100	-	.	Parent=FBgn0031299.1.mrna1;Target=FBgn0031299.1 275 386 +
ChrX	stalkie_big_nohaplotig	exon	29518053	29518152	100	-	.	Parent=FBgn0031299.1.mrna1;Target=FBgn0031299.1 175 274 +
ChrX	stalkie_big_nohaplotig	exon	29535555	29535728	100	-	.	Parent=FBgn0031299.1.mrna1;Target=FBgn0031299.1 1 174 +
ChrX	stalkie_big_nohaplotig	CDS	29508813	29509594	.	-	2	Parent=FBgn0031299.1.mrna1;Target=FBgn0031299.1 896 1677 +
ChrX	stalkie_big_nohaplotig	CDS	29509668	29509910	.	-	2	Parent=FBgn0031299.1.mrna1;Target=FBgn0031299.1 653 895 +
ChrX	stalkie_big_nohaplotig	CDS	29515927	29516035	.	-	0	Parent=FBgn0031299.1.mrna1;Target=FBgn0031299.1 544 652 +
ChrX	stalkie_big_nohaplotig	CDS	29516597	29516753	.	-	1	Parent=FBgn0031299.1.mrna1;Target=FBgn0031299.1 387 543 +
ChrX	stalkie_big_nohaplotig	CDS	29517242	29517353	.	-	2	Parent=FBgn0031299.1.mrna1;Target=FBgn0031299.1 275 386 +
ChrX	stalkie_big_nohaplotig	CDS	29518053	29518152	.	-	0	Parent=FBgn0031299.1.mrna1;Target=FBgn0031299.1 175 274 +
ChrX	stalkie_big_nohaplotig	CDS	29535555	29535728	.	-	0	Parent=FBgn0031299.1.mrna1;Target=FBgn0031299.1 1 174 +
ChrX	gffcl	locus	29591313	29592272	.	-	.	ID=RLOC_00001753;geneIDs=ORF1923.path1;transcripts=ORF1923.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29591313	29592272	.	-	.	ID=ORF1923.mrna1;geneID=ORF1923.path1;Name=ORF1923;Dir=indeterminatecoverage=100.0;identity=99.9;matches=959;mismatches=1;indels=0;unknowns=0;Target=ORF1923 960 1 .;locus=RLOC_00001753
ChrX	stalkie_big_nohaplotig	exon	29591313	29592272	99	-	.	Parent=ORF1923.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29591313	29592272	.	-	0	Parent=ORF1923.mrna1
ChrX	gffcl	locus	29595170	29600406	.	+	.	ID=RLOC_00001754;geneIDs=FBgn0034745.2.path1;transcripts=FBgn0034745.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29595170	29600406	.	+	.	ID=FBgn0034745.2.mrna1;geneID=FBgn0034745.2.path1;Name=FBgn0034745.2;Dir=sensecoverage=100.0;identity=99.9;matches=3572;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001754
ChrX	stalkie_big_nohaplotig	exon	29595170	29595423	100	+	.	Parent=FBgn0034745.2.mrna1;Target=FBgn0034745.2 1 254 +
ChrX	stalkie_big_nohaplotig	exon	29595483	29595563	100	+	.	Parent=FBgn0034745.2.mrna1;Target=FBgn0034745.2 255 335 +
ChrX	stalkie_big_nohaplotig	exon	29595628	29596550	100	+	.	Parent=FBgn0034745.2.mrna1;Target=FBgn0034745.2 336 1258 +
ChrX	stalkie_big_nohaplotig	exon	29596687	29596856	99	+	.	Parent=FBgn0034745.2.mrna1;Target=FBgn0034745.2 1259 1428 +
ChrX	stalkie_big_nohaplotig	exon	29596913	29597047	100	+	.	Parent=FBgn0034745.2.mrna1;Target=FBgn0034745.2 1429 1563 +
ChrX	stalkie_big_nohaplotig	exon	29598394	29600406	99	+	.	Parent=FBgn0034745.2.mrna1;Target=FBgn0034745.2 1564 3576 +
ChrX	stalkie_big_nohaplotig	CDS	29595170	29595423	.	+	0	Parent=FBgn0034745.2.mrna1;Target=FBgn0034745.2 1 254 +
ChrX	stalkie_big_nohaplotig	CDS	29595483	29595563	.	+	1	Parent=FBgn0034745.2.mrna1;Target=FBgn0034745.2 255 335 +
ChrX	stalkie_big_nohaplotig	CDS	29595628	29596550	.	+	1	Parent=FBgn0034745.2.mrna1;Target=FBgn0034745.2 336 1258 +
ChrX	stalkie_big_nohaplotig	CDS	29596687	29596856	.	+	2	Parent=FBgn0034745.2.mrna1;Target=FBgn0034745.2 1259 1428 +
ChrX	stalkie_big_nohaplotig	CDS	29596913	29597047	.	+	0	Parent=FBgn0034745.2.mrna1;Target=FBgn0034745.2 1429 1563 +
ChrX	stalkie_big_nohaplotig	CDS	29598394	29600406	.	+	0	Parent=FBgn0034745.2.mrna1;Target=FBgn0034745.2 1564 3576 +
ChrX	gffcl	locus	29642717	29642798	.	-	.	ID=RLOC_00001755;geneIDs=comp158098_c0_seq1.path1;transcripts=comp158098_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29642717	29642798	.	-	.	ID=comp158098_c0_seq1.mrna1;geneID=comp158098_c0_seq1.path1;Name=comp158098_c0_seq1;Dir=indeterminatecoverage=3.9;identity=98.8;matches=81;mismatches=1;indels=0;unknowns=0;Target=comp158098_c0_seq1 82 1 .;locus=RLOC_00001755
ChrX	stalkie_big_nohaplotig	exon	29642717	29642798	98	-	.	Parent=comp158098_c0_seq1.mrna1
ChrX	gffcl	locus	29694111	29698750	.	-	.	ID=RLOC_00001756;geneIDs=FBgn0011708.1.path1,comp150037_c0_seq1.path1;transcripts=FBgn0011708.1.mrna1,comp150037_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29694111	29698750	.	-	.	ID=FBgn0011708.1.mrna1;geneID=FBgn0011708.1.path1;Name=FBgn0011708.1;Dir=sensecoverage=100.0;identity=100.0;matches=1554;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001756
ChrX	stalkie_big_nohaplotig	exon	29694111	29694853	100	-	.	Parent=FBgn0011708.1.mrna1;Target=FBgn0011708.1 812 1554 +
ChrX	stalkie_big_nohaplotig	exon	29697940	29698750	100	-	.	Parent=FBgn0011708.1.mrna1;Target=FBgn0011708.1 1 811 +
ChrX	stalkie_big_nohaplotig	CDS	29694111	29694853	.	-	2	Parent=FBgn0011708.1.mrna1;Target=FBgn0011708.1 812 1554 +
ChrX	stalkie_big_nohaplotig	CDS	29697940	29698750	.	-	0	Parent=FBgn0011708.1.mrna1;Target=FBgn0011708.1 1 811 +
ChrX	stalkie_big_nohaplotig	mRNA	29697066	29697962	.	-	.	ID=comp150037_c0_seq1.mrna1;geneID=comp150037_c0_seq1.path1;Name=comp150037_c0_seq1;Dir=sensecoverage=87.9;identity=99.9;matches=838;mismatches=1;indels=0;unknowns=0;Target=comp150037_c0_seq1 674 839 +;locus=RLOC_00001756
ChrX	stalkie_big_nohaplotig	exon	29697066	29697881	99	-	.	Parent=comp150037_c0_seq1.mrna1;Target=comp150037_c0_seq1 24 839 +
ChrX	stalkie_big_nohaplotig	exon	29697940	29697962	100	-	.	Parent=comp150037_c0_seq1.mrna1;Target=comp150037_c0_seq1 1 23 +
ChrX	stalkie_big_nohaplotig	CDS	29697066	29697231	.	-	0	Parent=comp150037_c0_seq1.mrna1
ChrX	gffcl	locus	29699492	29701739	.	+	.	ID=RLOC_00001757;geneIDs=FBgn0015338.1.path1;transcripts=FBgn0015338.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29699492	29701739	.	+	.	ID=FBgn0015338.1.mrna1;geneID=FBgn0015338.1.path1;Name=FBgn0015338.1;Dir=sensecoverage=100.0;identity=100.0;matches=714;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001757
ChrX	stalkie_big_nohaplotig	exon	29699492	29699595	100	+	.	Parent=FBgn0015338.1.mrna1;Target=FBgn0015338.1 1 104 +
ChrX	stalkie_big_nohaplotig	exon	29699672	29699813	100	+	.	Parent=FBgn0015338.1.mrna1;Target=FBgn0015338.1 105 246 +
ChrX	stalkie_big_nohaplotig	exon	29699878	29700099	100	+	.	Parent=FBgn0015338.1.mrna1;Target=FBgn0015338.1 247 468 +
ChrX	stalkie_big_nohaplotig	exon	29701494	29701739	100	+	.	Parent=FBgn0015338.1.mrna1;Target=FBgn0015338.1 469 714 +
ChrX	stalkie_big_nohaplotig	CDS	29699492	29699595	.	+	0	Parent=FBgn0015338.1.mrna1;Target=FBgn0015338.1 1 104 +
ChrX	stalkie_big_nohaplotig	CDS	29699672	29699813	.	+	1	Parent=FBgn0015338.1.mrna1;Target=FBgn0015338.1 105 246 +
ChrX	stalkie_big_nohaplotig	CDS	29699878	29700099	.	+	0	Parent=FBgn0015338.1.mrna1;Target=FBgn0015338.1 247 468 +
ChrX	stalkie_big_nohaplotig	CDS	29701494	29701739	.	+	0	Parent=FBgn0015338.1.mrna1;Target=FBgn0015338.1 469 714 +
ChrX	gffcl	locus	29719588	29734242	.	-	.	ID=RLOC_00001758;geneIDs=comp163251_c2_seq1.path1;transcripts=comp163251_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29719588	29734242	.	-	.	ID=comp163251_c2_seq1.mrna1;geneID=comp163251_c2_seq1.path1;Name=comp163251_c2_seq1;Dir=sensecoverage=96.7;identity=99.8;matches=635;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001758
ChrX	stalkie_big_nohaplotig	exon	29719588	29719642	100	-	.	Parent=comp163251_c2_seq1.mrna1;Target=comp163251_c2_seq1 583 637 +
ChrX	stalkie_big_nohaplotig	exon	29719728	29719785	100	-	.	Parent=comp163251_c2_seq1.mrna1;Target=comp163251_c2_seq1 525 582 +
ChrX	stalkie_big_nohaplotig	exon	29719871	29719928	100	-	.	Parent=comp163251_c2_seq1.mrna1;Target=comp163251_c2_seq1 467 524 +
ChrX	stalkie_big_nohaplotig	exon	29721341	29721438	98	-	.	Parent=comp163251_c2_seq1.mrna1;Target=comp163251_c2_seq1 369 466 +
ChrX	stalkie_big_nohaplotig	exon	29722453	29722501	100	-	.	Parent=comp163251_c2_seq1.mrna1;Target=comp163251_c2_seq1 320 368 +
ChrX	stalkie_big_nohaplotig	exon	29722622	29722697	100	-	.	Parent=comp163251_c2_seq1.mrna1;Target=comp163251_c2_seq1 244 319 +
ChrX	stalkie_big_nohaplotig	exon	29722774	29722831	100	-	.	Parent=comp163251_c2_seq1.mrna1;Target=comp163251_c2_seq1 186 243 +
ChrX	stalkie_big_nohaplotig	exon	29734059	29734242	100	-	.	Parent=comp163251_c2_seq1.mrna1;Target=comp163251_c2_seq1 2 185 +
ChrX	stalkie_big_nohaplotig	CDS	29719590	29719642	.	-	2	Parent=comp163251_c2_seq1.mrna1;Target=comp163251_c2_seq1 583 635 +
ChrX	stalkie_big_nohaplotig	CDS	29719728	29719785	.	-	0	Parent=comp163251_c2_seq1.mrna1;Target=comp163251_c2_seq1 525 582 +
ChrX	stalkie_big_nohaplotig	CDS	29719871	29719928	.	-	1	Parent=comp163251_c2_seq1.mrna1;Target=comp163251_c2_seq1 467 524 +
ChrX	stalkie_big_nohaplotig	CDS	29721341	29721438	.	-	0	Parent=comp163251_c2_seq1.mrna1;Target=comp163251_c2_seq1 369 466 +
ChrX	stalkie_big_nohaplotig	CDS	29722453	29722501	.	-	1	Parent=comp163251_c2_seq1.mrna1;Target=comp163251_c2_seq1 320 368 +
ChrX	stalkie_big_nohaplotig	CDS	29722622	29722659	.	-	0	Parent=comp163251_c2_seq1.mrna1;Target=comp163251_c2_seq1 282 319 +
ChrX	gffcl	locus	29728003	29731147	.	+	.	ID=RLOC_00001759;geneIDs=FBgn0028894.1.path1;transcripts=FBgn0028894.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29728003	29731147	.	+	.	ID=FBgn0028894.1.mrna1;geneID=FBgn0028894.1.path1;Name=FBgn0028894.1;Dir=sensecoverage=98.8;identity=100.0;matches=412;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001759
ChrX	stalkie_big_nohaplotig	exon	29728003	29728097	100	+	.	Parent=FBgn0028894.1.mrna1;Target=FBgn0028894.1 6 100 +
ChrX	stalkie_big_nohaplotig	exon	29730590	29730780	100	+	.	Parent=FBgn0028894.1.mrna1;Target=FBgn0028894.1 101 291 +
ChrX	stalkie_big_nohaplotig	exon	29731022	29731147	100	+	.	Parent=FBgn0028894.1.mrna1;Target=FBgn0028894.1 292 417 +
ChrX	stalkie_big_nohaplotig	CDS	29728004	29728097	.	+	0	Parent=FBgn0028894.1.mrna1;Target=FBgn0028894.1 7 100 +
ChrX	stalkie_big_nohaplotig	CDS	29730590	29730780	.	+	2	Parent=FBgn0028894.1.mrna1;Target=FBgn0028894.1 101 291 +
ChrX	stalkie_big_nohaplotig	CDS	29731022	29731147	.	+	0	Parent=FBgn0028894.1.mrna1;Target=FBgn0028894.1 292 417 +
ChrX	gffcl	locus	29731255	29733130	.	-	.	ID=RLOC_00001760;geneIDs=comp159227_c1_seq1.path1;transcripts=comp159227_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29731255	29733130	.	-	.	ID=comp159227_c1_seq1.mrna1;geneID=comp159227_c1_seq1.path1;Name=comp159227_c1_seq1;Dir=indeterminatecoverage=95.2;identity=99.8;matches=1874;mismatches=2;indels=1;unknowns=0;Target=comp159227_c1_seq1 1881 5 .;CDS_Target=comp159227_c1_seq1 763 698 .;locus=RLOC_00001760
ChrX	stalkie_big_nohaplotig	exon	29731255	29733130	99	-	.	Parent=comp159227_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29732373	29732438	.	-	0	Parent=comp159227_c1_seq1.mrna1
ChrX	gffcl	locus	29736535	29738219	.	-	.	ID=RLOC_00001761;geneIDs=FBgn0028895.1.path1;transcripts=FBgn0028895.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29736535	29738219	.	-	.	ID=FBgn0028895.1.mrna1;geneID=FBgn0028895.1.path1;Name=FBgn0028895.1;Dir=sensecoverage=100.0;identity=100.0;matches=1401;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001761
ChrX	stalkie_big_nohaplotig	exon	29736535	29737266	100	-	.	Parent=FBgn0028895.1.mrna1;Target=FBgn0028895.1 670 1401 +
ChrX	stalkie_big_nohaplotig	exon	29737332	29737584	100	-	.	Parent=FBgn0028895.1.mrna1;Target=FBgn0028895.1 417 669 +
ChrX	stalkie_big_nohaplotig	exon	29737677	29737802	100	-	.	Parent=FBgn0028895.1.mrna1;Target=FBgn0028895.1 291 416 +
ChrX	stalkie_big_nohaplotig	exon	29737870	29738012	100	-	.	Parent=FBgn0028895.1.mrna1;Target=FBgn0028895.1 148 290 +
ChrX	stalkie_big_nohaplotig	exon	29738073	29738219	100	-	.	Parent=FBgn0028895.1.mrna1;Target=FBgn0028895.1 1 147 +
ChrX	stalkie_big_nohaplotig	CDS	29736535	29737266	.	-	0	Parent=FBgn0028895.1.mrna1;Target=FBgn0028895.1 670 1401 +
ChrX	stalkie_big_nohaplotig	CDS	29737332	29737584	.	-	1	Parent=FBgn0028895.1.mrna1;Target=FBgn0028895.1 417 669 +
ChrX	stalkie_big_nohaplotig	CDS	29737677	29737802	.	-	1	Parent=FBgn0028895.1.mrna1;Target=FBgn0028895.1 291 416 +
ChrX	stalkie_big_nohaplotig	CDS	29737870	29738012	.	-	0	Parent=FBgn0028895.1.mrna1;Target=FBgn0028895.1 148 290 +
ChrX	stalkie_big_nohaplotig	CDS	29738073	29738219	.	-	0	Parent=FBgn0028895.1.mrna1;Target=FBgn0028895.1 1 147 +
ChrX	gffcl	locus	29740927	29745680	.	+	.	ID=RLOC_00001762;geneIDs=FBgn0028375.1.path1;transcripts=FBgn0028375.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29740927	29745680	.	+	.	ID=FBgn0028375.1.mrna1;geneID=FBgn0028375.1.path1;Name=FBgn0028375.1;Dir=sensecoverage=99.7;identity=100.0;matches=1143;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001762
ChrX	stalkie_big_nohaplotig	exon	29740927	29741433	100	+	.	Parent=FBgn0028375.1.mrna1;Target=FBgn0028375.1 4 510 +
ChrX	stalkie_big_nohaplotig	exon	29745045	29745680	100	+	.	Parent=FBgn0028375.1.mrna1;Target=FBgn0028375.1 511 1146 +
ChrX	stalkie_big_nohaplotig	CDS	29740927	29741433	.	+	0	Parent=FBgn0028375.1.mrna1;Target=FBgn0028375.1 4 510 +
ChrX	stalkie_big_nohaplotig	CDS	29745045	29745680	.	+	0	Parent=FBgn0028375.1.mrna1;Target=FBgn0028375.1 511 1146 +
ChrX	gffcl	locus	29748987	29749410	.	+	.	ID=RLOC_00001763;geneIDs=comp116348_c0_seq1.path1;transcripts=comp116348_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29748987	29749410	.	+	.	ID=comp116348_c0_seq1.mrna1;geneID=comp116348_c0_seq1.path1;Name=comp116348_c0_seq1;Dir=indeterminatecoverage=94.2;identity=100.0;matches=424;mismatches=0;indels=0;unknowns=0;Target=comp116348_c0_seq1 433 10 .;CDS_Target=comp116348_c0_seq1 68 12 .;locus=RLOC_00001763
ChrX	stalkie_big_nohaplotig	exon	29748987	29749410	100	+	.	Parent=comp116348_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29748989	29749045	.	+	0	Parent=comp116348_c0_seq1.mrna1
ChrX	gffcl	locus	29750079	29750808	.	+	.	ID=RLOC_00001764;geneIDs=comp143475_c0_seq1.path1;transcripts=comp143475_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29750079	29750808	.	+	.	ID=comp143475_c0_seq1.mrna1;geneID=comp143475_c0_seq1.path1;Name=comp143475_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=723;mismatches=5;indels=6;unknowns=0;Target=comp143475_c0_seq1 732 1 .;CDS_Target=comp143475_c0_seq1 309 205 .;locus=RLOC_00001764
ChrX	stalkie_big_nohaplotig	exon	29750079	29750808	98	+	.	Parent=comp143475_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29750283	29750387	.	+	0	Parent=comp143475_c0_seq1.mrna1
ChrX	gffcl	locus	29773190	29773815	.	-	.	ID=RLOC_00001765;geneIDs=comp1609974_c0_seq1.path1;transcripts=comp1609974_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29773190	29773815	.	-	.	ID=comp1609974_c0_seq1.mrna1;geneID=comp1609974_c0_seq1.path1;Name=comp1609974_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=626;mismatches=0;indels=0;unknowns=0;Target=comp1609974_c0_seq1 626 1 .;CDS_Target=comp1609974_c0_seq1 499 425 .;locus=RLOC_00001765
ChrX	stalkie_big_nohaplotig	exon	29773190	29773815	100	-	.	Parent=comp1609974_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29773317	29773391	.	-	0	Parent=comp1609974_c0_seq1.mrna1
ChrX	gffcl	locus	29773881	29774873	.	-	.	ID=RLOC_00001766;geneIDs=comp79163_c1_seq1.path1;transcripts=comp79163_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29773881	29774873	.	-	.	ID=comp79163_c1_seq1.mrna1;geneID=comp79163_c1_seq1.path1;Name=comp79163_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=991;mismatches=2;indels=0;unknowns=0;Target=comp79163_c1_seq1 993 1 .;CDS_Target=comp79163_c1_seq1 138 1 .;locus=RLOC_00001766
ChrX	stalkie_big_nohaplotig	exon	29773881	29774873	99	-	.	Parent=comp79163_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29774736	29774873	.	-	0	Parent=comp79163_c1_seq1.mrna1
ChrX	gffcl	locus	29775196	29778836	.	-	.	ID=RLOC_00001767;geneIDs=ORF604.path1,comp159341_c0_seq1.path1;transcripts=comp159341_c0_seq1.mrna1,ORF604.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29775196	29778836	.	-	.	ID=comp159341_c0_seq1.mrna1;geneID=comp159341_c0_seq1.path1;Name=comp159341_c0_seq1;Dir=sensecoverage=98.1;identity=100.0;matches=2246;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001767
ChrX	stalkie_big_nohaplotig	exon	29775196	29775727	100	-	.	Parent=comp159341_c0_seq1.mrna1;Target=comp159341_c0_seq1 1744 2275 +
ChrX	stalkie_big_nohaplotig	exon	29776067	29776357	100	-	.	Parent=comp159341_c0_seq1.mrna1;Target=comp159341_c0_seq1 1453 1743 +
ChrX	stalkie_big_nohaplotig	exon	29776460	29777191	100	-	.	Parent=comp159341_c0_seq1.mrna1;Target=comp159341_c0_seq1 721 1452 +
ChrX	stalkie_big_nohaplotig	exon	29777258	29777388	100	-	.	Parent=comp159341_c0_seq1.mrna1;Target=comp159341_c0_seq1 590 720 +
ChrX	stalkie_big_nohaplotig	exon	29778277	29778836	100	-	.	Parent=comp159341_c0_seq1.mrna1;Target=comp159341_c0_seq1 30 589 +
ChrX	stalkie_big_nohaplotig	CDS	29775659	29775727	.	-	0	Parent=comp159341_c0_seq1.mrna1;Target=comp159341_c0_seq1 1744 1812 +
ChrX	stalkie_big_nohaplotig	CDS	29776067	29776357	.	-	0	Parent=comp159341_c0_seq1.mrna1;Target=comp159341_c0_seq1 1453 1743 +
ChrX	stalkie_big_nohaplotig	CDS	29776460	29777191	.	-	0	Parent=comp159341_c0_seq1.mrna1;Target=comp159341_c0_seq1 721 1452 +
ChrX	stalkie_big_nohaplotig	CDS	29777258	29777388	.	-	2	Parent=comp159341_c0_seq1.mrna1;Target=comp159341_c0_seq1 590 720 +
ChrX	stalkie_big_nohaplotig	CDS	29778277	29778661	.	-	0	Parent=comp159341_c0_seq1.mrna1;Target=comp159341_c0_seq1 205 589 +
ChrX	stalkie_big_nohaplotig	mRNA	29776001	29778676	.	-	.	ID=ORF604.mrna1;geneID=ORF604.path1;Name=ORF604;Dir=sensecoverage=100.0;identity=99.4;matches=1611;mismatches=9;indels=0;unknowns=0;locus=RLOC_00001767
ChrX	stalkie_big_nohaplotig	exon	29776001	29776357	97	-	.	Parent=ORF604.mrna1;Target=ORF604 1264 1620 +
ChrX	stalkie_big_nohaplotig	exon	29776460	29777191	100	-	.	Parent=ORF604.mrna1;Target=ORF604 532 1263 +
ChrX	stalkie_big_nohaplotig	exon	29777258	29777388	100	-	.	Parent=ORF604.mrna1;Target=ORF604 401 531 +
ChrX	stalkie_big_nohaplotig	exon	29778277	29778676	100	-	.	Parent=ORF604.mrna1;Target=ORF604 1 400 +
ChrX	stalkie_big_nohaplotig	CDS	29776001	29776357	.	-	0	Parent=ORF604.mrna1;Target=ORF604 1264 1620 +
ChrX	stalkie_big_nohaplotig	CDS	29776460	29777191	.	-	0	Parent=ORF604.mrna1;Target=ORF604 532 1263 +
ChrX	stalkie_big_nohaplotig	CDS	29777258	29777388	.	-	2	Parent=ORF604.mrna1;Target=ORF604 401 531 +
ChrX	stalkie_big_nohaplotig	CDS	29778277	29778676	.	-	0	Parent=ORF604.mrna1;Target=ORF604 1 400 +
ChrX	gffcl	locus	29781071	29783253	.	.	.	ID=RLOC_00001768;geneIDs=ORF765.path1,comp156865_c0_seq1.path1;transcripts=comp156865_c0_seq1.mrna1,ORF765.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29781071	29783253	.	-	.	ID=comp156865_c0_seq1.mrna1;geneID=comp156865_c0_seq1.path1;Name=comp156865_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2182;mismatches=1;indels=0;unknowns=0;Target=comp156865_c0_seq1 2183 1 .;CDS_Target=comp156865_c0_seq1 1270 1043 .;locus=RLOC_00001768
ChrX	stalkie_big_nohaplotig	exon	29781071	29783253	99	-	.	Parent=comp156865_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29781984	29782211	.	-	0	Parent=comp156865_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29781601	29783201	.	+	.	ID=ORF765.mrna1;geneID=ORF765.path1;Name=ORF765;Dir=sensecoverage=100.0;identity=100.0;matches=1446;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001768
ChrX	stalkie_big_nohaplotig	exon	29781601	29782279	100	+	.	Parent=ORF765.mrna1;Target=ORF765 1 679 +
ChrX	stalkie_big_nohaplotig	exon	29782360	29782553	100	+	.	Parent=ORF765.mrna1;Target=ORF765 680 873 +
ChrX	stalkie_big_nohaplotig	exon	29782629	29783201	100	+	.	Parent=ORF765.mrna1;Target=ORF765 874 1446 +
ChrX	stalkie_big_nohaplotig	CDS	29781601	29782279	.	+	0	Parent=ORF765.mrna1;Target=ORF765 1 679 +
ChrX	stalkie_big_nohaplotig	CDS	29782360	29782553	.	+	2	Parent=ORF765.mrna1;Target=ORF765 680 873 +
ChrX	stalkie_big_nohaplotig	CDS	29782629	29783201	.	+	0	Parent=ORF765.mrna1;Target=ORF765 874 1446 +
ChrX	gffcl	locus	29785883	29786249	.	-	.	ID=RLOC_00001769;geneIDs=comp149694_c3_seq1.path1;transcripts=comp149694_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29785883	29786249	.	-	.	ID=comp149694_c3_seq1.mrna1;geneID=comp149694_c3_seq1.path1;Name=comp149694_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=364;mismatches=3;indels=0;unknowns=0;Target=comp149694_c3_seq1 367 1 .;CDS_Target=comp149694_c3_seq1 366 196 .;locus=RLOC_00001769
ChrX	stalkie_big_nohaplotig	exon	29785883	29786249	99	-	.	Parent=comp149694_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29785884	29786054	.	-	0	Parent=comp149694_c3_seq1.mrna1
ChrX	gffcl	locus	29787332	29788454	.	-	.	ID=RLOC_00001770;geneIDs=comp149268_c0_seq1.path1;transcripts=comp149268_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29787332	29788454	.	-	.	ID=comp149268_c0_seq1.mrna1;geneID=comp149268_c0_seq1.path1;Name=comp149268_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1120;mismatches=2;indels=1;unknowns=0;Target=comp149268_c0_seq1 1122 1 .;CDS_Target=comp149268_c0_seq1 975 871 .;locus=RLOC_00001770
ChrX	stalkie_big_nohaplotig	exon	29787332	29788454	99	-	.	Parent=comp149268_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29787479	29787583	.	-	0	Parent=comp149268_c0_seq1.mrna1
ChrX	gffcl	locus	29788548	29790522	.	-	.	ID=RLOC_00001771;geneIDs=comp157990_c0_seq1.path1;transcripts=comp157990_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29788548	29790522	.	-	.	ID=comp157990_c0_seq1.mrna1;geneID=comp157990_c0_seq1.path1;Name=comp157990_c0_seq1;Dir=sensecoverage=100.0;identity=99.1;matches=1791;mismatches=1;indels=16;unknowns=0;Target=comp157990_c0_seq1 1029 1196 +;locus=RLOC_00001771
ChrX	stalkie_big_nohaplotig	exon	29788548	29789792	100	-	.	Parent=comp157990_c0_seq1.mrna1;Target=comp157990_c0_seq1 564 1808 +
ChrX	stalkie_big_nohaplotig	exon	29789976	29790522	96	-	.	Parent=comp157990_c0_seq1.mrna1;Target=comp157990_c0_seq1 1 563 +
ChrX	stalkie_big_nohaplotig	CDS	29789160	29789327	.	-	0	Parent=comp157990_c0_seq1.mrna1
ChrX	gffcl	locus	29790892	29798873	.	-	.	ID=RLOC_00001772;geneIDs=FBgn0040079.1.path1;transcripts=FBgn0040079.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29790892	29798873	.	-	.	ID=FBgn0040079.1.mrna1;geneID=FBgn0040079.1.path1;Name=FBgn0040079.1;Dir=sensecoverage=100.0;identity=100.0;matches=2238;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001772
ChrX	stalkie_big_nohaplotig	exon	29790892	29792828	100	-	.	Parent=FBgn0040079.1.mrna1;Target=FBgn0040079.1 302 2238 +
ChrX	stalkie_big_nohaplotig	exon	29798346	29798606	100	-	.	Parent=FBgn0040079.1.mrna1;Target=FBgn0040079.1 41 301 +
ChrX	stalkie_big_nohaplotig	exon	29798834	29798873	100	-	.	Parent=FBgn0040079.1.mrna1;Target=FBgn0040079.1 1 40 +
ChrX	stalkie_big_nohaplotig	CDS	29790892	29792828	.	-	2	Parent=FBgn0040079.1.mrna1;Target=FBgn0040079.1 302 2238 +
ChrX	stalkie_big_nohaplotig	CDS	29798346	29798606	.	-	2	Parent=FBgn0040079.1.mrna1;Target=FBgn0040079.1 41 301 +
ChrX	stalkie_big_nohaplotig	CDS	29798834	29798873	.	-	0	Parent=FBgn0040079.1.mrna1;Target=FBgn0040079.1 1 40 +
ChrX	gffcl	locus	29807471	29807898	.	+	.	ID=RLOC_00001773;geneIDs=comp117378_c0_seq1.path1;transcripts=comp117378_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29807471	29807898	.	+	.	ID=comp117378_c0_seq1.mrna1;geneID=comp117378_c0_seq1.path1;Name=comp117378_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=428;mismatches=0;indels=9;unknowns=0;Target=comp117378_c0_seq1 437 1 .;CDS_Target=comp117378_c0_seq1 98 3 .;locus=RLOC_00001773
ChrX	stalkie_big_nohaplotig	exon	29807471	29807898	97	+	.	Parent=comp117378_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29807473	29807568	.	+	0	Parent=comp117378_c0_seq1.mrna1
ChrX	gffcl	locus	29811512	29812479	.	-	.	ID=RLOC_00001774;geneIDs=comp135035_c0_seq1.path1;transcripts=comp135035_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29811512	29812479	.	-	.	ID=comp135035_c0_seq1.mrna1;geneID=comp135035_c0_seq1.path1;Name=comp135035_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=967;mismatches=1;indels=0;unknowns=0;Target=comp135035_c0_seq1 968 1 .;CDS_Target=comp135035_c0_seq1 738 625 .;locus=RLOC_00001774
ChrX	stalkie_big_nohaplotig	exon	29811512	29812479	99	-	.	Parent=comp135035_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29811742	29811855	.	-	0	Parent=comp135035_c0_seq1.mrna1
ChrX	gffcl	locus	29814903	29815602	.	-	.	ID=RLOC_00001775;geneIDs=comp135612_c0_seq1.path1;transcripts=comp135612_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29814903	29815602	.	-	.	ID=comp135612_c0_seq1.mrna1;geneID=comp135612_c0_seq1.path1;Name=comp135612_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.6;matches=676;mismatches=0;indels=24;unknowns=0;Target=comp135612_c0_seq1 677 2 .;CDS_Target=comp135612_c0_seq1 677 3 .;locus=RLOC_00001775
ChrX	stalkie_big_nohaplotig	exon	29814903	29815602	96	-	.	Parent=comp135612_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29814903	29815601	.	-	0	Parent=comp135612_c0_seq1.mrna1
ChrX	gffcl	locus	29816886	29863318	.	-	.	ID=RLOC_00001776;geneIDs=FBgn0001994.1.path1;transcripts=FBgn0001994.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29816886	29863318	.	-	.	ID=FBgn0001994.1.mrna1;geneID=FBgn0001994.1.path1;Name=FBgn0001994.1;Dir=sensecoverage=100.0;identity=100.0;matches=1833;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001776
ChrX	stalkie_big_nohaplotig	exon	29816886	29818304	100	-	.	Parent=FBgn0001994.1.mrna1;Target=FBgn0001994.1 415 1833 +
ChrX	stalkie_big_nohaplotig	exon	29839889	29840207	100	-	.	Parent=FBgn0001994.1.mrna1;Target=FBgn0001994.1 96 414 +
ChrX	stalkie_big_nohaplotig	exon	29863224	29863318	100	-	.	Parent=FBgn0001994.1.mrna1;Target=FBgn0001994.1 1 95 +
ChrX	stalkie_big_nohaplotig	CDS	29816886	29818304	.	-	0	Parent=FBgn0001994.1.mrna1;Target=FBgn0001994.1 415 1833 +
ChrX	stalkie_big_nohaplotig	CDS	29839889	29840207	.	-	1	Parent=FBgn0001994.1.mrna1;Target=FBgn0001994.1 96 414 +
ChrX	stalkie_big_nohaplotig	CDS	29863224	29863318	.	-	0	Parent=FBgn0001994.1.mrna1;Target=FBgn0001994.1 1 95 +
ChrX	gffcl	locus	29872729	29877107	.	+	.	ID=RLOC_00001777;geneIDs=FBgn0039638.1.path1;transcripts=FBgn0039638.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29872729	29877107	.	+	.	ID=FBgn0039638.1.mrna1;geneID=FBgn0039638.1.path1;Name=FBgn0039638.1;Dir=sensecoverage=100.0;identity=100.0;matches=2319;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001777
ChrX	stalkie_big_nohaplotig	exon	29872729	29873134	100	+	.	Parent=FBgn0039638.1.mrna1;Target=FBgn0039638.1 1 406 +
ChrX	stalkie_big_nohaplotig	exon	29873221	29873742	100	+	.	Parent=FBgn0039638.1.mrna1;Target=FBgn0039638.1 407 928 +
ChrX	stalkie_big_nohaplotig	exon	29873816	29874235	100	+	.	Parent=FBgn0039638.1.mrna1;Target=FBgn0039638.1 929 1348 +
ChrX	stalkie_big_nohaplotig	exon	29875915	29876498	100	+	.	Parent=FBgn0039638.1.mrna1;Target=FBgn0039638.1 1349 1932 +
ChrX	stalkie_big_nohaplotig	exon	29876571	29876714	100	+	.	Parent=FBgn0039638.1.mrna1;Target=FBgn0039638.1 1933 2076 +
ChrX	stalkie_big_nohaplotig	exon	29876797	29876895	100	+	.	Parent=FBgn0039638.1.mrna1;Target=FBgn0039638.1 2077 2175 +
ChrX	stalkie_big_nohaplotig	exon	29876964	29877107	100	+	.	Parent=FBgn0039638.1.mrna1;Target=FBgn0039638.1 2176 2319 +
ChrX	stalkie_big_nohaplotig	CDS	29872729	29873134	.	+	0	Parent=FBgn0039638.1.mrna1;Target=FBgn0039638.1 1 406 +
ChrX	stalkie_big_nohaplotig	CDS	29873221	29873742	.	+	2	Parent=FBgn0039638.1.mrna1;Target=FBgn0039638.1 407 928 +
ChrX	stalkie_big_nohaplotig	CDS	29873816	29874235	.	+	2	Parent=FBgn0039638.1.mrna1;Target=FBgn0039638.1 929 1348 +
ChrX	stalkie_big_nohaplotig	CDS	29875915	29876498	.	+	2	Parent=FBgn0039638.1.mrna1;Target=FBgn0039638.1 1349 1932 +
ChrX	stalkie_big_nohaplotig	CDS	29876571	29876714	.	+	0	Parent=FBgn0039638.1.mrna1;Target=FBgn0039638.1 1933 2076 +
ChrX	stalkie_big_nohaplotig	CDS	29876797	29876895	.	+	0	Parent=FBgn0039638.1.mrna1;Target=FBgn0039638.1 2077 2175 +
ChrX	stalkie_big_nohaplotig	CDS	29876964	29877107	.	+	0	Parent=FBgn0039638.1.mrna1;Target=FBgn0039638.1 2176 2319 +
ChrX	gffcl	locus	29880581	29881467	.	-	.	ID=RLOC_00001778;geneIDs=FBgn0028897.1.path1;transcripts=FBgn0028897.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29880581	29881467	.	-	.	ID=FBgn0028897.1.mrna1;geneID=FBgn0028897.1.path1;Name=FBgn0028897.1;Dir=sensecoverage=100.0;identity=99.9;matches=821;mismatches=0;indels=1;unknowns=0;Target=FBgn0028897.1 3 59 +;locus=RLOC_00001778
ChrX	stalkie_big_nohaplotig	exon	29880581	29880699	100	-	.	Parent=FBgn0028897.1.mrna1;Target=FBgn0028897.1 704 822 +
ChrX	stalkie_big_nohaplotig	exon	29880766	29881467	99	-	.	Parent=FBgn0028897.1.mrna1;Target=FBgn0028897.1 1 703 +
ChrX	stalkie_big_nohaplotig	CDS	29881410	29881465	.	-	0	Parent=FBgn0028897.1.mrna1
ChrX	gffcl	locus	29885240	29911760	.	+	.	ID=RLOC_00001779;geneIDs=comp159224_c0_seq1.path1;transcripts=comp159224_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29885240	29911760	.	+	.	ID=comp159224_c0_seq1.mrna1;geneID=comp159224_c0_seq1.path1;Name=comp159224_c0_seq1;Dir=indeterminatecoverage=98.3;identity=98.7;matches=1734;mismatches=12;indels=10;unknowns=0;Target=comp159224_c0_seq1 1507 1370 .;locus=RLOC_00001779
ChrX	stalkie_big_nohaplotig	exon	29885240	29885246	100	+	.	Parent=comp159224_c0_seq1.mrna1;Target=comp159224_c0_seq1 38 32 .
ChrX	stalkie_big_nohaplotig	exon	29885635	29885640	100	+	.	Parent=comp159224_c0_seq1.mrna1;Target=comp159224_c0_seq1 44 39 .
ChrX	stalkie_big_nohaplotig	exon	29888575	29888576	100	+	.	Parent=comp159224_c0_seq1.mrna1;Target=comp159224_c0_seq1 46 45 .
ChrX	stalkie_big_nohaplotig	exon	29889034	29889037	100	+	.	Parent=comp159224_c0_seq1.mrna1;Target=comp159224_c0_seq1 50 47 .
ChrX	stalkie_big_nohaplotig	exon	29904476	29904480	100	+	.	Parent=comp159224_c0_seq1.mrna1;Target=comp159224_c0_seq1 55 51 .
ChrX	stalkie_big_nohaplotig	exon	29910030	29911760	98	+	.	Parent=comp159224_c0_seq1.mrna1;Target=comp159224_c0_seq1 1778 56 .
ChrX	stalkie_big_nohaplotig	CDS	29911352	29911489	.	+	0	Parent=comp159224_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31238639	31239523	.	+	.	ID=ORF2269.mrna1;geneID=ORF2269.path1;Name=ORF2269;Dir=indeterminatecoverage=100.0;identity=100.0;matches=885;mismatches=0;indels=0;unknowns=0;Target=ORF2269 885 1 .;locus=RLOC_00001780
ChrX	stalkie_big_nohaplotig	exon	31238639	31239523	100	+	.	Parent=ORF2269.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31238639	31239523	.	+	0	Parent=ORF2269.mrna1
ChrX	gffcl	locus	29914147	29914993	.	+	.	ID=RLOC_00001781;geneIDs=comp62026_c0_seq1.path1;transcripts=comp62026_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29914147	29914993	.	+	.	ID=comp62026_c0_seq1.mrna1;geneID=comp62026_c0_seq1.path1;Name=comp62026_c0_seq1;Dir=sensecoverage=99.2;identity=100.0;matches=785;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001781
ChrX	stalkie_big_nohaplotig	exon	29914147	29914532	100	+	.	Parent=comp62026_c0_seq1.mrna1;Target=comp62026_c0_seq1 2 387 +
ChrX	stalkie_big_nohaplotig	exon	29914595	29914993	100	+	.	Parent=comp62026_c0_seq1.mrna1;Target=comp62026_c0_seq1 388 786 +
ChrX	stalkie_big_nohaplotig	CDS	29914436	29914532	.	+	0	Parent=comp62026_c0_seq1.mrna1;Target=comp62026_c0_seq1 291 387 +
ChrX	stalkie_big_nohaplotig	CDS	29914595	29914743	.	+	2	Parent=comp62026_c0_seq1.mrna1;Target=comp62026_c0_seq1 388 536 +
ChrX	gffcl	locus	29917063	29919106	.	-	.	ID=RLOC_00001782;geneIDs=Dv_FBgn0203351.1.path1;transcripts=Dv_FBgn0203351.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29917063	29919106	.	-	.	ID=Dv_FBgn0203351.1.mrna1;geneID=Dv_FBgn0203351.1.path1;Name=Dv_FBgn0203351.1;Dir=sensecoverage=99.9;identity=100.0;matches=1286;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001782
ChrX	stalkie_big_nohaplotig	exon	29917063	29917191	100	-	.	Parent=Dv_FBgn0203351.1.mrna1;Target=Dv_FBgn0203351.1 1158 1286 +
ChrX	stalkie_big_nohaplotig	exon	29917266	29917628	100	-	.	Parent=Dv_FBgn0203351.1.mrna1;Target=Dv_FBgn0203351.1 795 1157 +
ChrX	stalkie_big_nohaplotig	exon	29918185	29918402	100	-	.	Parent=Dv_FBgn0203351.1.mrna1;Target=Dv_FBgn0203351.1 577 794 +
ChrX	stalkie_big_nohaplotig	exon	29918463	29918641	100	-	.	Parent=Dv_FBgn0203351.1.mrna1;Target=Dv_FBgn0203351.1 398 576 +
ChrX	stalkie_big_nohaplotig	exon	29918710	29919106	100	-	.	Parent=Dv_FBgn0203351.1.mrna1;Target=Dv_FBgn0203351.1 1 397 +
ChrX	stalkie_big_nohaplotig	CDS	29917065	29917191	.	-	1	Parent=Dv_FBgn0203351.1.mrna1;Target=Dv_FBgn0203351.1 1158 1284 +
ChrX	stalkie_big_nohaplotig	CDS	29917266	29917628	.	-	1	Parent=Dv_FBgn0203351.1.mrna1;Target=Dv_FBgn0203351.1 795 1157 +
ChrX	stalkie_big_nohaplotig	CDS	29918185	29918402	.	-	0	Parent=Dv_FBgn0203351.1.mrna1;Target=Dv_FBgn0203351.1 577 794 +
ChrX	stalkie_big_nohaplotig	CDS	29918463	29918641	.	-	2	Parent=Dv_FBgn0203351.1.mrna1;Target=Dv_FBgn0203351.1 398 576 +
ChrX	stalkie_big_nohaplotig	CDS	29918710	29919106	.	-	0	Parent=Dv_FBgn0203351.1.mrna1;Target=Dv_FBgn0203351.1 1 397 +
ChrX	gffcl	locus	29920271	29921274	.	+	.	ID=RLOC_00001783;geneIDs=comp152408_c0_seq1.path1;transcripts=comp152408_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29920271	29921274	.	+	.	ID=comp152408_c0_seq1.mrna1;geneID=comp152408_c0_seq1.path1;Name=comp152408_c0_seq1;Dir=antisensecoverage=100.0;identity=95.5;matches=931;mismatches=15;indels=29;unknowns=0;Target=comp152408_c0_seq1 703 936 .;locus=RLOC_00001783
ChrX	stalkie_big_nohaplotig	exon	29920271	29920694	92	+	.	Parent=comp152408_c0_seq1.mrna1;Target=comp152408_c0_seq1 523 975 -
ChrX	stalkie_big_nohaplotig	exon	29920753	29921274	97	+	.	Parent=comp152408_c0_seq1.mrna1;Target=comp152408_c0_seq1 1 522 -
ChrX	stalkie_big_nohaplotig	CDS	29920310	29920514	.	+	0	Parent=comp152408_c0_seq1.mrna1
ChrX	gffcl	locus	29926160	29939593	.	+	.	ID=RLOC_00001784;geneIDs=FBgn0051974.1.path1,comp1454660_c0_seq1.path1;transcripts=FBgn0051974.1.mrna1,comp1454660_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29926160	29939593	.	+	.	ID=FBgn0051974.1.mrna1;geneID=FBgn0051974.1.path1;Name=FBgn0051974.1;Dir=sensecoverage=100.0;identity=100.0;matches=1251;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001784
ChrX	stalkie_big_nohaplotig	exon	29926160	29926174	100	+	.	Parent=FBgn0051974.1.mrna1;Target=FBgn0051974.1 1 15 +
ChrX	stalkie_big_nohaplotig	exon	29935572	29936213	100	+	.	Parent=FBgn0051974.1.mrna1;Target=FBgn0051974.1 16 657 +
ChrX	stalkie_big_nohaplotig	exon	29937081	29937255	100	+	.	Parent=FBgn0051974.1.mrna1;Target=FBgn0051974.1 658 832 +
ChrX	stalkie_big_nohaplotig	exon	29937314	29937527	100	+	.	Parent=FBgn0051974.1.mrna1;Target=FBgn0051974.1 833 1046 +
ChrX	stalkie_big_nohaplotig	exon	29939389	29939593	100	+	.	Parent=FBgn0051974.1.mrna1;Target=FBgn0051974.1 1047 1251 +
ChrX	stalkie_big_nohaplotig	CDS	29926160	29926174	.	+	0	Parent=FBgn0051974.1.mrna1;Target=FBgn0051974.1 1 15 +
ChrX	stalkie_big_nohaplotig	CDS	29935572	29936213	.	+	0	Parent=FBgn0051974.1.mrna1;Target=FBgn0051974.1 16 657 +
ChrX	stalkie_big_nohaplotig	CDS	29937081	29937255	.	+	0	Parent=FBgn0051974.1.mrna1;Target=FBgn0051974.1 658 832 +
ChrX	stalkie_big_nohaplotig	CDS	29937314	29937527	.	+	2	Parent=FBgn0051974.1.mrna1;Target=FBgn0051974.1 833 1046 +
ChrX	stalkie_big_nohaplotig	CDS	29939389	29939593	.	+	1	Parent=FBgn0051974.1.mrna1;Target=FBgn0051974.1 1047 1251 +
ChrX	stalkie_big_nohaplotig	mRNA	29932122	29935595	.	+	.	ID=comp1454660_c0_seq1.mrna1;geneID=comp1454660_c0_seq1.path1;Name=comp1454660_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=396;mismatches=0;indels=0;unknowns=0;Target=comp1454660_c0_seq1 89 187 .;locus=RLOC_00001784
ChrX	stalkie_big_nohaplotig	exon	29932122	29932493	100	+	.	Parent=comp1454660_c0_seq1.mrna1;Target=comp1454660_c0_seq1 25 396 -
ChrX	stalkie_big_nohaplotig	exon	29935572	29935595	100	+	.	Parent=comp1454660_c0_seq1.mrna1;Target=comp1454660_c0_seq1 1 24 -
ChrX	stalkie_big_nohaplotig	CDS	29932331	29932429	.	+	0	Parent=comp1454660_c0_seq1.mrna1
ChrX	gffcl	locus	29931459	29932098	.	-	.	ID=RLOC_00001785;geneIDs=comp71208_c0_seq1.path1;transcripts=comp71208_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29931459	29932098	.	-	.	ID=comp71208_c0_seq1.mrna1;geneID=comp71208_c0_seq1.path1;Name=comp71208_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=640;mismatches=0;indels=0;unknowns=0;Target=comp71208_c0_seq1 640 1 .;CDS_Target=comp71208_c0_seq1 485 399 .;locus=RLOC_00001785
ChrX	stalkie_big_nohaplotig	exon	29931459	29932098	100	-	.	Parent=comp71208_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	29931614	29931700	.	-	0	Parent=comp71208_c0_seq1.mrna1
ChrX	gffcl	locus	29985444	29988248	.	+	.	ID=RLOC_00001786;geneIDs=comp153576_c0_seq1.path1;transcripts=comp153576_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	29985444	29988248	.	+	.	ID=comp153576_c0_seq1.mrna1;geneID=comp153576_c0_seq1.path1;Name=comp153576_c0_seq1;Dir=sensecoverage=99.7;identity=99.8;matches=957;mismatches=2;indels=0;unknowns=0;Target=comp153576_c0_seq1 175 798 +;locus=RLOC_00001786
ChrX	stalkie_big_nohaplotig	exon	29985444	29985569	98	+	.	Parent=comp153576_c0_seq1.mrna1;Target=comp153576_c0_seq1 3 128 +
ChrX	stalkie_big_nohaplotig	exon	29987416	29988248	100	+	.	Parent=comp153576_c0_seq1.mrna1;Target=comp153576_c0_seq1 129 961 +
ChrX	stalkie_big_nohaplotig	CDS	29987462	29988085	.	+	0	Parent=comp153576_c0_seq1.mrna1
ChrX	gffcl	locus	30000433	30001653	.	-	.	ID=RLOC_00001787;geneIDs=FBgn0001142.1.path1;transcripts=FBgn0001142.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30000433	30001653	.	-	.	ID=FBgn0001142.1.mrna1;geneID=FBgn0001142.1.path1;Name=FBgn0001142.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1221;mismatches=0;indels=0;unknowns=0;Target=FBgn0001142.1 1221 1 .;locus=RLOC_00001787
ChrX	stalkie_big_nohaplotig	exon	30000433	30001653	100	-	.	Parent=FBgn0001142.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30000433	30001653	.	-	0	Parent=FBgn0001142.1.mrna1
ChrX	gffcl	locus	30027016	30098213	.	+	.	ID=RLOC_00001788;geneIDs=FBgn0035711.1.path1;transcripts=FBgn0035711.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30027016	30098213	.	+	.	ID=FBgn0035711.1.mrna1;geneID=FBgn0035711.1.path1;Name=FBgn0035711.1;Dir=sensecoverage=100.0;identity=100.0;matches=837;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001788
ChrX	stalkie_big_nohaplotig	exon	30027016	30027142	100	+	.	Parent=FBgn0035711.1.mrna1;Target=FBgn0035711.1 1 127 +
ChrX	stalkie_big_nohaplotig	exon	30060733	30060819	100	+	.	Parent=FBgn0035711.1.mrna1;Target=FBgn0035711.1 128 214 +
ChrX	stalkie_big_nohaplotig	exon	30089499	30089656	100	+	.	Parent=FBgn0035711.1.mrna1;Target=FBgn0035711.1 215 372 +
ChrX	stalkie_big_nohaplotig	exon	30092487	30092642	100	+	.	Parent=FBgn0035711.1.mrna1;Target=FBgn0035711.1 373 528 +
ChrX	stalkie_big_nohaplotig	exon	30097905	30098213	100	+	.	Parent=FBgn0035711.1.mrna1;Target=FBgn0035711.1 529 837 +
ChrX	stalkie_big_nohaplotig	CDS	30027016	30027142	.	+	0	Parent=FBgn0035711.1.mrna1;Target=FBgn0035711.1 1 127 +
ChrX	stalkie_big_nohaplotig	CDS	30060733	30060819	.	+	2	Parent=FBgn0035711.1.mrna1;Target=FBgn0035711.1 128 214 +
ChrX	stalkie_big_nohaplotig	CDS	30089499	30089656	.	+	2	Parent=FBgn0035711.1.mrna1;Target=FBgn0035711.1 215 372 +
ChrX	stalkie_big_nohaplotig	CDS	30092487	30092642	.	+	0	Parent=FBgn0035711.1.mrna1;Target=FBgn0035711.1 373 528 +
ChrX	stalkie_big_nohaplotig	CDS	30097905	30098213	.	+	0	Parent=FBgn0035711.1.mrna1;Target=FBgn0035711.1 529 837 +
ChrX	gffcl	locus	30044890	30045651	.	+	.	ID=RLOC_00001789;geneIDs=ORF3163.path1;transcripts=ORF3163.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30044890	30045651	.	+	.	ID=ORF3163.mrna1;geneID=ORF3163.path1;Name=ORF3163;Dir=indeterminatecoverage=100.0;identity=100.0;matches=762;mismatches=0;indels=0;unknowns=0;Target=ORF3163 762 1 .;locus=RLOC_00001789
ChrX	stalkie_big_nohaplotig	exon	30044890	30045651	100	+	.	Parent=ORF3163.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30044890	30045651	.	+	0	Parent=ORF3163.mrna1
ChrX	gffcl	locus	30098989	30099513	.	-	.	ID=RLOC_00001791;geneIDs=comp135225_c0_seq1.path1;transcripts=comp135225_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30098989	30099513	.	-	.	ID=comp135225_c0_seq1.mrna1;geneID=comp135225_c0_seq1.path1;Name=comp135225_c0_seq1;Dir=indeterminatecoverage=95.6;identity=100.0;matches=525;mismatches=0;indels=0;unknowns=0;Target=comp135225_c0_seq1 528 4 .;CDS_Target=comp135225_c0_seq1 528 430 .;locus=RLOC_00001791
ChrX	stalkie_big_nohaplotig	exon	30098989	30099513	100	-	.	Parent=comp135225_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30098989	30099087	.	-	0	Parent=comp135225_c0_seq1.mrna1
ChrX	gffcl	locus	30105015	30110250	.	-	.	ID=RLOC_00001792;geneIDs=FBgn0042175.1.path1;transcripts=FBgn0042175.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30105015	30110250	.	-	.	ID=FBgn0042175.1.mrna1;geneID=FBgn0042175.1.path1;Name=FBgn0042175.1;Dir=sensecoverage=100.0;identity=100.0;matches=1290;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001792
ChrX	stalkie_big_nohaplotig	exon	30105015	30105237	100	-	.	Parent=FBgn0042175.1.mrna1;Target=FBgn0042175.1 1068 1290 +
ChrX	stalkie_big_nohaplotig	exon	30105306	30105600	100	-	.	Parent=FBgn0042175.1.mrna1;Target=FBgn0042175.1 773 1067 +
ChrX	stalkie_big_nohaplotig	exon	30105668	30105895	100	-	.	Parent=FBgn0042175.1.mrna1;Target=FBgn0042175.1 545 772 +
ChrX	stalkie_big_nohaplotig	exon	30105982	30106362	100	-	.	Parent=FBgn0042175.1.mrna1;Target=FBgn0042175.1 164 544 +
ChrX	stalkie_big_nohaplotig	exon	30110088	30110250	100	-	.	Parent=FBgn0042175.1.mrna1;Target=FBgn0042175.1 1 163 +
ChrX	stalkie_big_nohaplotig	CDS	30105015	30105237	.	-	1	Parent=FBgn0042175.1.mrna1;Target=FBgn0042175.1 1068 1290 +
ChrX	stalkie_big_nohaplotig	CDS	30105306	30105600	.	-	2	Parent=FBgn0042175.1.mrna1;Target=FBgn0042175.1 773 1067 +
ChrX	stalkie_big_nohaplotig	CDS	30105668	30105895	.	-	2	Parent=FBgn0042175.1.mrna1;Target=FBgn0042175.1 545 772 +
ChrX	stalkie_big_nohaplotig	CDS	30105982	30106362	.	-	2	Parent=FBgn0042175.1.mrna1;Target=FBgn0042175.1 164 544 +
ChrX	stalkie_big_nohaplotig	CDS	30110088	30110250	.	-	0	Parent=FBgn0042175.1.mrna1;Target=FBgn0042175.1 1 163 +
ChrX	gffcl	locus	30112824	30115125	.	+	.	ID=RLOC_00001793;geneIDs=FBgn0032863.1.path1;transcripts=FBgn0032863.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30112824	30115125	.	+	.	ID=FBgn0032863.1.mrna1;geneID=FBgn0032863.1.path1;Name=FBgn0032863.1;Dir=sensecoverage=100.0;identity=100.0;matches=2055;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001793
ChrX	stalkie_big_nohaplotig	exon	30112824	30113604	100	+	.	Parent=FBgn0032863.1.mrna1;Target=FBgn0032863.1 1 781 +
ChrX	stalkie_big_nohaplotig	exon	30113663	30113842	100	+	.	Parent=FBgn0032863.1.mrna1;Target=FBgn0032863.1 782 961 +
ChrX	stalkie_big_nohaplotig	exon	30113906	30114070	100	+	.	Parent=FBgn0032863.1.mrna1;Target=FBgn0032863.1 962 1126 +
ChrX	stalkie_big_nohaplotig	exon	30114132	30114568	100	+	.	Parent=FBgn0032863.1.mrna1;Target=FBgn0032863.1 1127 1563 +
ChrX	stalkie_big_nohaplotig	exon	30114634	30115125	100	+	.	Parent=FBgn0032863.1.mrna1;Target=FBgn0032863.1 1564 2055 +
ChrX	stalkie_big_nohaplotig	CDS	30112824	30113604	.	+	0	Parent=FBgn0032863.1.mrna1;Target=FBgn0032863.1 1 781 +
ChrX	stalkie_big_nohaplotig	CDS	30113663	30113842	.	+	2	Parent=FBgn0032863.1.mrna1;Target=FBgn0032863.1 782 961 +
ChrX	stalkie_big_nohaplotig	CDS	30113906	30114070	.	+	2	Parent=FBgn0032863.1.mrna1;Target=FBgn0032863.1 962 1126 +
ChrX	stalkie_big_nohaplotig	CDS	30114132	30114568	.	+	2	Parent=FBgn0032863.1.mrna1;Target=FBgn0032863.1 1127 1563 +
ChrX	stalkie_big_nohaplotig	CDS	30114634	30115125	.	+	0	Parent=FBgn0032863.1.mrna1;Target=FBgn0032863.1 1564 2055 +
ChrX	gffcl	locus	30118538	30124765	.	-	.	ID=RLOC_00001794;geneIDs=FBgn0031515.1.path1;transcripts=FBgn0031515.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30118538	30124765	.	-	.	ID=FBgn0031515.1.mrna1;geneID=FBgn0031515.1.path1;Name=FBgn0031515.1;Dir=sensecoverage=100.0;identity=100.0;matches=1977;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001794
ChrX	stalkie_big_nohaplotig	exon	30118538	30118879	100	-	.	Parent=FBgn0031515.1.mrna1;Target=FBgn0031515.1 1636 1977 +
ChrX	stalkie_big_nohaplotig	exon	30118949	30119205	100	-	.	Parent=FBgn0031515.1.mrna1;Target=FBgn0031515.1 1379 1635 +
ChrX	stalkie_big_nohaplotig	exon	30119274	30119442	100	-	.	Parent=FBgn0031515.1.mrna1;Target=FBgn0031515.1 1210 1378 +
ChrX	stalkie_big_nohaplotig	exon	30119506	30119699	100	-	.	Parent=FBgn0031515.1.mrna1;Target=FBgn0031515.1 1016 1209 +
ChrX	stalkie_big_nohaplotig	exon	30120076	30120195	100	-	.	Parent=FBgn0031515.1.mrna1;Target=FBgn0031515.1 896 1015 +
ChrX	stalkie_big_nohaplotig	exon	30120260	30120644	100	-	.	Parent=FBgn0031515.1.mrna1;Target=FBgn0031515.1 511 895 +
ChrX	stalkie_big_nohaplotig	exon	30120733	30120922	100	-	.	Parent=FBgn0031515.1.mrna1;Target=FBgn0031515.1 321 510 +
ChrX	stalkie_big_nohaplotig	exon	30120972	30121098	100	-	.	Parent=FBgn0031515.1.mrna1;Target=FBgn0031515.1 194 320 +
ChrX	stalkie_big_nohaplotig	exon	30124573	30124765	100	-	.	Parent=FBgn0031515.1.mrna1;Target=FBgn0031515.1 1 193 +
ChrX	stalkie_big_nohaplotig	CDS	30118538	30118879	.	-	0	Parent=FBgn0031515.1.mrna1;Target=FBgn0031515.1 1636 1977 +
ChrX	stalkie_big_nohaplotig	CDS	30118949	30119205	.	-	2	Parent=FBgn0031515.1.mrna1;Target=FBgn0031515.1 1379 1635 +
ChrX	stalkie_big_nohaplotig	CDS	30119274	30119442	.	-	0	Parent=FBgn0031515.1.mrna1;Target=FBgn0031515.1 1210 1378 +
ChrX	stalkie_big_nohaplotig	CDS	30119506	30119699	.	-	2	Parent=FBgn0031515.1.mrna1;Target=FBgn0031515.1 1016 1209 +
ChrX	stalkie_big_nohaplotig	CDS	30120076	30120195	.	-	2	Parent=FBgn0031515.1.mrna1;Target=FBgn0031515.1 896 1015 +
ChrX	stalkie_big_nohaplotig	CDS	30120260	30120644	.	-	0	Parent=FBgn0031515.1.mrna1;Target=FBgn0031515.1 511 895 +
ChrX	stalkie_big_nohaplotig	CDS	30120733	30120922	.	-	1	Parent=FBgn0031515.1.mrna1;Target=FBgn0031515.1 321 510 +
ChrX	stalkie_big_nohaplotig	CDS	30120972	30121098	.	-	2	Parent=FBgn0031515.1.mrna1;Target=FBgn0031515.1 194 320 +
ChrX	stalkie_big_nohaplotig	CDS	30124573	30124765	.	-	0	Parent=FBgn0031515.1.mrna1;Target=FBgn0031515.1 1 193 +
ChrX	gffcl	locus	30136309	30136934	.	-	.	ID=RLOC_00001795;geneIDs=comp95228_c0_seq1.path1;transcripts=comp95228_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30136309	30136934	.	-	.	ID=comp95228_c0_seq1.mrna1;geneID=comp95228_c0_seq1.path1;Name=comp95228_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.8;matches=625;mismatches=1;indels=0;unknowns=0;Target=comp95228_c0_seq1 626 1 .;CDS_Target=comp95228_c0_seq1 599 468 .;locus=RLOC_00001795
ChrX	stalkie_big_nohaplotig	exon	30136309	30136934	99	-	.	Parent=comp95228_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30136336	30136467	.	-	0	Parent=comp95228_c0_seq1.mrna1
ChrX	gffcl	locus	30140079	30188266	.	-	.	ID=RLOC_00001796;geneIDs=FBgn0031516.1.path1;transcripts=FBgn0031516.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30140079	30188266	.	-	.	ID=FBgn0031516.1.mrna1;geneID=FBgn0031516.1.path1;Name=FBgn0031516.1;Dir=sensecoverage=100.0;identity=100.0;matches=2619;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001796
ChrX	stalkie_big_nohaplotig	exon	30140079	30140420	100	-	.	Parent=FBgn0031516.1.mrna1;Target=FBgn0031516.1 2278 2619 +
ChrX	stalkie_big_nohaplotig	exon	30140488	30140744	100	-	.	Parent=FBgn0031516.1.mrna1;Target=FBgn0031516.1 2021 2277 +
ChrX	stalkie_big_nohaplotig	exon	30141795	30142328	100	-	.	Parent=FBgn0031516.1.mrna1;Target=FBgn0031516.1 1487 2020 +
ChrX	stalkie_big_nohaplotig	exon	30144314	30144448	100	-	.	Parent=FBgn0031516.1.mrna1;Target=FBgn0031516.1 1352 1486 +
ChrX	stalkie_big_nohaplotig	exon	30144585	30144823	100	-	.	Parent=FBgn0031516.1.mrna1;Target=FBgn0031516.1 1113 1351 +
ChrX	stalkie_big_nohaplotig	exon	30144886	30145031	100	-	.	Parent=FBgn0031516.1.mrna1;Target=FBgn0031516.1 967 1112 +
ChrX	stalkie_big_nohaplotig	exon	30145097	30145286	100	-	.	Parent=FBgn0031516.1.mrna1;Target=FBgn0031516.1 777 966 +
ChrX	stalkie_big_nohaplotig	exon	30146689	30146806	100	-	.	Parent=FBgn0031516.1.mrna1;Target=FBgn0031516.1 659 776 +
ChrX	stalkie_big_nohaplotig	exon	30187609	30188266	100	-	.	Parent=FBgn0031516.1.mrna1;Target=FBgn0031516.1 1 658 +
ChrX	stalkie_big_nohaplotig	CDS	30140079	30140420	.	-	0	Parent=FBgn0031516.1.mrna1;Target=FBgn0031516.1 2278 2619 +
ChrX	stalkie_big_nohaplotig	CDS	30140488	30140744	.	-	2	Parent=FBgn0031516.1.mrna1;Target=FBgn0031516.1 2021 2277 +
ChrX	stalkie_big_nohaplotig	CDS	30141795	30142328	.	-	2	Parent=FBgn0031516.1.mrna1;Target=FBgn0031516.1 1487 2020 +
ChrX	stalkie_big_nohaplotig	CDS	30144314	30144448	.	-	2	Parent=FBgn0031516.1.mrna1;Target=FBgn0031516.1 1352 1486 +
ChrX	stalkie_big_nohaplotig	CDS	30144585	30144823	.	-	1	Parent=FBgn0031516.1.mrna1;Target=FBgn0031516.1 1113 1351 +
ChrX	stalkie_big_nohaplotig	CDS	30144886	30145031	.	-	0	Parent=FBgn0031516.1.mrna1;Target=FBgn0031516.1 967 1112 +
ChrX	stalkie_big_nohaplotig	CDS	30145097	30145286	.	-	1	Parent=FBgn0031516.1.mrna1;Target=FBgn0031516.1 777 966 +
ChrX	stalkie_big_nohaplotig	CDS	30146689	30146806	.	-	2	Parent=FBgn0031516.1.mrna1;Target=FBgn0031516.1 659 776 +
ChrX	stalkie_big_nohaplotig	CDS	30187609	30188266	.	-	0	Parent=FBgn0031516.1.mrna1;Target=FBgn0031516.1 1 658 +
ChrX	gffcl	locus	30188591	30190668	.	-	.	ID=RLOC_00001797;geneIDs=comp144938_c0_seq1.path1;transcripts=comp144938_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30188591	30190668	.	-	.	ID=comp144938_c0_seq1.mrna1;geneID=comp144938_c0_seq1.path1;Name=comp144938_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2078;mismatches=0;indels=0;unknowns=0;Target=comp144938_c0_seq1 2078 1 .;CDS_Target=comp144938_c0_seq1 426 316 .;locus=RLOC_00001797
ChrX	stalkie_big_nohaplotig	exon	30188591	30190668	100	-	.	Parent=comp144938_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30190243	30190353	.	-	0	Parent=comp144938_c0_seq1.mrna1
ChrX	gffcl	locus	30190985	30191677	.	-	.	ID=RLOC_00001798;geneIDs=comp146701_c0_seq1.path1;transcripts=comp146701_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30190985	30191677	.	-	.	ID=comp146701_c0_seq1.mrna1;geneID=comp146701_c0_seq1.path1;Name=comp146701_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=693;mismatches=0;indels=1;unknowns=0;Target=comp146701_c0_seq1 694 1 .;CDS_Target=comp146701_c0_seq1 275 81 .;locus=RLOC_00001798
ChrX	stalkie_big_nohaplotig	exon	30190985	30191677	99	-	.	Parent=comp146701_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30191403	30191597	.	-	0	Parent=comp146701_c0_seq1.mrna1
ChrX	gffcl	locus	30192375	30193133	.	+	.	ID=RLOC_00001799;geneIDs=comp159490_c2_seq1.path1;transcripts=comp159490_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30192375	30193133	.	+	.	ID=comp159490_c2_seq1.mrna1;geneID=comp159490_c2_seq1.path1;Name=comp159490_c2_seq1;Dir=indeterminatecoverage=67.6;identity=100.0;matches=759;mismatches=0;indels=0;unknowns=0;Target=comp159490_c2_seq1 759 1 .;CDS_Target=comp159490_c2_seq1 89 3 .;locus=RLOC_00001799
ChrX	stalkie_big_nohaplotig	exon	30192375	30193133	100	+	.	Parent=comp159490_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30192377	30192463	.	+	0	Parent=comp159490_c2_seq1.mrna1
ChrX	gffcl	locus	30195699	30198156	.	-	.	ID=RLOC_00001800;geneIDs=comp120013_c0_seq1.path1;transcripts=comp120013_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30195699	30198156	.	-	.	ID=comp120013_c0_seq1.mrna1;geneID=comp120013_c0_seq1.path1;Name=comp120013_c0_seq1;Dir=antisensecoverage=99.8;identity=99.5;matches=870;mismatches=3;indels=1;unknowns=0;locus=RLOC_00001800
ChrX	stalkie_big_nohaplotig	exon	30195699	30196294	99	-	.	Parent=comp120013_c0_seq1.mrna1;Target=comp120013_c0_seq1 3 598 -
ChrX	stalkie_big_nohaplotig	exon	30196374	30196469	100	-	.	Parent=comp120013_c0_seq1.mrna1;Target=comp120013_c0_seq1 599 694 -
ChrX	stalkie_big_nohaplotig	exon	30196548	30196614	100	-	.	Parent=comp120013_c0_seq1.mrna1;Target=comp120013_c0_seq1 695 761 -
ChrX	stalkie_big_nohaplotig	exon	30198043	30198156	98	-	.	Parent=comp120013_c0_seq1.mrna1;Target=comp120013_c0_seq1 762 876 -
ChrX	stalkie_big_nohaplotig	CDS	30195926	30196294	.	-	0	Parent=comp120013_c0_seq1.mrna1;Target=comp120013_c0_seq1 230 598 .
ChrX	stalkie_big_nohaplotig	CDS	30196374	30196451	.	-	0	Parent=comp120013_c0_seq1.mrna1;Target=comp120013_c0_seq1 599 676 .
ChrX	gffcl	locus	30198982	30199635	.	-	.	ID=RLOC_00001801;geneIDs=comp172525_c0_seq1.path1;transcripts=comp172525_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30198982	30199635	.	-	.	ID=comp172525_c0_seq1.mrna1;geneID=comp172525_c0_seq1.path1;Name=comp172525_c0_seq1;Dir=sensecoverage=97.2;identity=100.0;matches=599;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001801
ChrX	stalkie_big_nohaplotig	exon	30198982	30199325	100	-	.	Parent=comp172525_c0_seq1.mrna1;Target=comp172525_c0_seq1 257 600 +
ChrX	stalkie_big_nohaplotig	exon	30199381	30199635	100	-	.	Parent=comp172525_c0_seq1.mrna1;Target=comp172525_c0_seq1 2 256 +
ChrX	stalkie_big_nohaplotig	CDS	30199143	30199325	.	-	0	Parent=comp172525_c0_seq1.mrna1;Target=comp172525_c0_seq1 257 439 +
ChrX	stalkie_big_nohaplotig	CDS	30199381	30199527	.	-	0	Parent=comp172525_c0_seq1.mrna1;Target=comp172525_c0_seq1 110 256 +
ChrX	gffcl	locus	30203420	30248283	.	-	.	ID=RLOC_00001802;geneIDs=FBgn0264494.1.path1;transcripts=FBgn0264494.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30203420	30248283	.	-	.	ID=FBgn0264494.1.mrna1;geneID=FBgn0264494.1.path1;Name=FBgn0264494.1;Dir=sensecoverage=100.0;identity=100.0;matches=2175;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001802
ChrX	stalkie_big_nohaplotig	exon	30203420	30203761	100	-	.	Parent=FBgn0264494.1.mrna1;Target=FBgn0264494.1 1834 2175 +
ChrX	stalkie_big_nohaplotig	exon	30203826	30203984	100	-	.	Parent=FBgn0264494.1.mrna1;Target=FBgn0264494.1 1675 1833 +
ChrX	stalkie_big_nohaplotig	exon	30209496	30209596	100	-	.	Parent=FBgn0264494.1.mrna1;Target=FBgn0264494.1 1574 1674 +
ChrX	stalkie_big_nohaplotig	exon	30216282	30216450	100	-	.	Parent=FBgn0264494.1.mrna1;Target=FBgn0264494.1 1405 1573 +
ChrX	stalkie_big_nohaplotig	exon	30220192	30220475	100	-	.	Parent=FBgn0264494.1.mrna1;Target=FBgn0264494.1 1121 1404 +
ChrX	stalkie_big_nohaplotig	exon	30224911	30225045	100	-	.	Parent=FBgn0264494.1.mrna1;Target=FBgn0264494.1 986 1120 +
ChrX	stalkie_big_nohaplotig	exon	30225204	30225442	100	-	.	Parent=FBgn0264494.1.mrna1;Target=FBgn0264494.1 747 985 +
ChrX	stalkie_big_nohaplotig	exon	30235735	30235880	100	-	.	Parent=FBgn0264494.1.mrna1;Target=FBgn0264494.1 601 746 +
ChrX	stalkie_big_nohaplotig	exon	30238334	30238529	100	-	.	Parent=FBgn0264494.1.mrna1;Target=FBgn0264494.1 405 600 +
ChrX	stalkie_big_nohaplotig	exon	30247732	30247849	100	-	.	Parent=FBgn0264494.1.mrna1;Target=FBgn0264494.1 287 404 +
ChrX	stalkie_big_nohaplotig	exon	30247998	30248283	100	-	.	Parent=FBgn0264494.1.mrna1;Target=FBgn0264494.1 1 286 +
ChrX	stalkie_big_nohaplotig	CDS	30203420	30203761	.	-	0	Parent=FBgn0264494.1.mrna1;Target=FBgn0264494.1 1834 2175 +
ChrX	stalkie_big_nohaplotig	CDS	30203826	30203984	.	-	0	Parent=FBgn0264494.1.mrna1;Target=FBgn0264494.1 1675 1833 +
ChrX	stalkie_big_nohaplotig	CDS	30209496	30209596	.	-	2	Parent=FBgn0264494.1.mrna1;Target=FBgn0264494.1 1574 1674 +
ChrX	stalkie_big_nohaplotig	CDS	30216282	30216450	.	-	0	Parent=FBgn0264494.1.mrna1;Target=FBgn0264494.1 1405 1573 +
ChrX	stalkie_big_nohaplotig	CDS	30220192	30220475	.	-	2	Parent=FBgn0264494.1.mrna1;Target=FBgn0264494.1 1121 1404 +
ChrX	stalkie_big_nohaplotig	CDS	30224911	30225045	.	-	2	Parent=FBgn0264494.1.mrna1;Target=FBgn0264494.1 986 1120 +
ChrX	stalkie_big_nohaplotig	CDS	30225204	30225442	.	-	1	Parent=FBgn0264494.1.mrna1;Target=FBgn0264494.1 747 985 +
ChrX	stalkie_big_nohaplotig	CDS	30235735	30235880	.	-	0	Parent=FBgn0264494.1.mrna1;Target=FBgn0264494.1 601 746 +
ChrX	stalkie_big_nohaplotig	CDS	30238334	30238529	.	-	1	Parent=FBgn0264494.1.mrna1;Target=FBgn0264494.1 405 600 +
ChrX	stalkie_big_nohaplotig	CDS	30247732	30247849	.	-	2	Parent=FBgn0264494.1.mrna1;Target=FBgn0264494.1 287 404 +
ChrX	stalkie_big_nohaplotig	CDS	30247998	30248283	.	-	0	Parent=FBgn0264494.1.mrna1;Target=FBgn0264494.1 1 286 +
ChrX	gffcl	locus	30309894	30311865	.	-	.	ID=RLOC_00001803;geneIDs=comp152916_c0_seq1.path1;transcripts=comp152916_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30309894	30311865	.	-	.	ID=comp152916_c0_seq1.mrna1;geneID=comp152916_c0_seq1.path1;Name=comp152916_c0_seq1;Dir=sensecoverage=99.9;identity=99.9;matches=1060;mismatches=0;indels=1;unknowns=0;Target=comp152916_c0_seq1 112 204 +;locus=RLOC_00001803
ChrX	stalkie_big_nohaplotig	exon	30309894	30310437	99	-	.	Parent=comp152916_c0_seq1.mrna1;Target=comp152916_c0_seq1 518 1062 +
ChrX	stalkie_big_nohaplotig	exon	30311285	30311578	100	-	.	Parent=comp152916_c0_seq1.mrna1;Target=comp152916_c0_seq1 224 517 +
ChrX	stalkie_big_nohaplotig	exon	30311644	30311865	100	-	.	Parent=comp152916_c0_seq1.mrna1;Target=comp152916_c0_seq1 2 223 +
ChrX	stalkie_big_nohaplotig	CDS	30311663	30311755	.	-	0	Parent=comp152916_c0_seq1.mrna1
ChrX	gffcl	locus	30312453	30313413	.	-	.	ID=RLOC_00001804;geneIDs=comp152541_c0_seq1.path1;transcripts=comp152541_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30312453	30313413	.	-	.	ID=comp152541_c0_seq1.mrna1;geneID=comp152541_c0_seq1.path1;Name=comp152541_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=901;mismatches=3;indels=0;unknowns=0;Target=comp152541_c0_seq1 433 516 +;locus=RLOC_00001804
ChrX	stalkie_big_nohaplotig	exon	30312453	30312740	100	-	.	Parent=comp152541_c0_seq1.mrna1;Target=comp152541_c0_seq1 617 904 +
ChrX	stalkie_big_nohaplotig	exon	30312798	30313413	99	-	.	Parent=comp152541_c0_seq1.mrna1;Target=comp152541_c0_seq1 1 616 +
ChrX	stalkie_big_nohaplotig	CDS	30312898	30312981	.	-	0	Parent=comp152541_c0_seq1.mrna1
ChrX	gffcl	locus	30314332	30315390	.	-	.	ID=RLOC_00001805;geneIDs=FBgn0031360.1.path1;transcripts=FBgn0031360.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30314332	30315390	.	-	.	ID=FBgn0031360.1.mrna1;geneID=FBgn0031360.1.path1;Name=FBgn0031360.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1058;mismatches=1;indels=0;unknowns=0;Target=FBgn0031360.1 1059 1 .;locus=RLOC_00001805
ChrX	stalkie_big_nohaplotig	exon	30314332	30315390	99	-	.	Parent=FBgn0031360.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30314332	30315390	.	-	0	Parent=FBgn0031360.1.mrna1
ChrX	gffcl	locus	30317293	30318256	.	-	.	ID=RLOC_00001806;geneIDs=FBgn0260648.1.path1;transcripts=FBgn0260648.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30317293	30318256	.	-	.	ID=FBgn0260648.1.mrna1;geneID=FBgn0260648.1.path1;Name=FBgn0260648.1;Dir=sensecoverage=100.0;identity=100.0;matches=888;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001806
ChrX	stalkie_big_nohaplotig	exon	30317293	30318125	100	-	.	Parent=FBgn0260648.1.mrna1;Target=FBgn0260648.1 56 888 +
ChrX	stalkie_big_nohaplotig	exon	30318202	30318256	100	-	.	Parent=FBgn0260648.1.mrna1;Target=FBgn0260648.1 1 55 +
ChrX	stalkie_big_nohaplotig	CDS	30317293	30318125	.	-	2	Parent=FBgn0260648.1.mrna1;Target=FBgn0260648.1 56 888 +
ChrX	stalkie_big_nohaplotig	CDS	30318202	30318256	.	-	0	Parent=FBgn0260648.1.mrna1;Target=FBgn0260648.1 1 55 +
ChrX	gffcl	locus	30323272	30331725	.	+	.	ID=RLOC_00001807;geneIDs=FBgn0000579.1.path1;transcripts=FBgn0000579.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30323272	30331725	.	+	.	ID=FBgn0000579.1.mrna1;geneID=FBgn0000579.1.path1;Name=FBgn0000579.1;Dir=sensecoverage=100.0;identity=100.0;matches=1743;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001807
ChrX	stalkie_big_nohaplotig	exon	30323272	30323696	100	+	.	Parent=FBgn0000579.1.mrna1;Target=FBgn0000579.1 1 425 +
ChrX	stalkie_big_nohaplotig	exon	30330339	30331074	100	+	.	Parent=FBgn0000579.1.mrna1;Target=FBgn0000579.1 426 1161 +
ChrX	stalkie_big_nohaplotig	exon	30331144	30331725	100	+	.	Parent=FBgn0000579.1.mrna1;Target=FBgn0000579.1 1162 1743 +
ChrX	stalkie_big_nohaplotig	CDS	30323272	30323696	.	+	0	Parent=FBgn0000579.1.mrna1;Target=FBgn0000579.1 1 425 +
ChrX	stalkie_big_nohaplotig	CDS	30330339	30331074	.	+	1	Parent=FBgn0000579.1.mrna1;Target=FBgn0000579.1 426 1161 +
ChrX	stalkie_big_nohaplotig	CDS	30331144	30331725	.	+	0	Parent=FBgn0000579.1.mrna1;Target=FBgn0000579.1 1162 1743 +
ChrX	gffcl	locus	30333738	30367192	.	-	.	ID=RLOC_00001808;geneIDs=FBgn0261278.1.path1,comp145394_c0_seq1.path1;transcripts=FBgn0261278.1.mrna1,comp145394_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30333738	30367192	.	-	.	ID=FBgn0261278.1.mrna1;geneID=FBgn0261278.1.path1;Name=FBgn0261278.1;Dir=sensecoverage=100.0;identity=100.0;matches=1746;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001808
ChrX	stalkie_big_nohaplotig	exon	30333738	30334402	100	-	.	Parent=FBgn0261278.1.mrna1;Target=FBgn0261278.1 1082 1746 +
ChrX	stalkie_big_nohaplotig	exon	30343182	30343400	100	-	.	Parent=FBgn0261278.1.mrna1;Target=FBgn0261278.1 863 1081 +
ChrX	stalkie_big_nohaplotig	exon	30345709	30345851	100	-	.	Parent=FBgn0261278.1.mrna1;Target=FBgn0261278.1 720 862 +
ChrX	stalkie_big_nohaplotig	exon	30345922	30346099	100	-	.	Parent=FBgn0261278.1.mrna1;Target=FBgn0261278.1 542 719 +
ChrX	stalkie_big_nohaplotig	exon	30363529	30363752	100	-	.	Parent=FBgn0261278.1.mrna1;Target=FBgn0261278.1 318 541 +
ChrX	stalkie_big_nohaplotig	exon	30366876	30367192	100	-	.	Parent=FBgn0261278.1.mrna1;Target=FBgn0261278.1 1 317 +
ChrX	stalkie_big_nohaplotig	CDS	30333738	30334402	.	-	2	Parent=FBgn0261278.1.mrna1;Target=FBgn0261278.1 1082 1746 +
ChrX	stalkie_big_nohaplotig	CDS	30343182	30343400	.	-	2	Parent=FBgn0261278.1.mrna1;Target=FBgn0261278.1 863 1081 +
ChrX	stalkie_big_nohaplotig	CDS	30345709	30345851	.	-	1	Parent=FBgn0261278.1.mrna1;Target=FBgn0261278.1 720 862 +
ChrX	stalkie_big_nohaplotig	CDS	30345922	30346099	.	-	2	Parent=FBgn0261278.1.mrna1;Target=FBgn0261278.1 542 719 +
ChrX	stalkie_big_nohaplotig	CDS	30363529	30363752	.	-	1	Parent=FBgn0261278.1.mrna1;Target=FBgn0261278.1 318 541 +
ChrX	stalkie_big_nohaplotig	CDS	30366876	30367192	.	-	0	Parent=FBgn0261278.1.mrna1;Target=FBgn0261278.1 1 317 +
ChrX	stalkie_big_nohaplotig	mRNA	30340671	30343205	.	-	.	ID=comp145394_c0_seq1.mrna1;geneID=comp145394_c0_seq1.path1;Name=comp145394_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=319;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001808
ChrX	stalkie_big_nohaplotig	exon	30340671	30340965	100	-	.	Parent=comp145394_c0_seq1.mrna1;Target=comp145394_c0_seq1 25 319 +
ChrX	stalkie_big_nohaplotig	exon	30343182	30343205	100	-	.	Parent=comp145394_c0_seq1.mrna1;Target=comp145394_c0_seq1 1 24 +
ChrX	stalkie_big_nohaplotig	CDS	30340760	30340965	.	-	2	Parent=comp145394_c0_seq1.mrna1;Target=comp145394_c0_seq1 25 230 +
ChrX	stalkie_big_nohaplotig	CDS	30343182	30343203	.	-	0	Parent=comp145394_c0_seq1.mrna1;Target=comp145394_c0_seq1 3 24 +
ChrX	gffcl	locus	30334731	30335559	.	-	.	ID=RLOC_00001809;geneIDs=comp148535_c0_seq1.path1;transcripts=comp148535_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30334731	30335559	.	-	.	ID=comp148535_c0_seq1.mrna1;geneID=comp148535_c0_seq1.path1;Name=comp148535_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=649;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001809
ChrX	stalkie_big_nohaplotig	exon	30334731	30334980	100	-	.	Parent=comp148535_c0_seq1.mrna1;Target=comp148535_c0_seq1 1 250 -
ChrX	stalkie_big_nohaplotig	exon	30335160	30335559	99	-	.	Parent=comp148535_c0_seq1.mrna1;Target=comp148535_c0_seq1 251 650 -
ChrX	stalkie_big_nohaplotig	CDS	30334951	30334980	.	-	0	Parent=comp148535_c0_seq1.mrna1;Target=comp148535_c0_seq1 221 250 .
ChrX	stalkie_big_nohaplotig	CDS	30335160	30335267	.	-	0	Parent=comp148535_c0_seq1.mrna1;Target=comp148535_c0_seq1 251 358 .
ChrX	gffcl	locus	30335893	30336557	.	+	.	ID=RLOC_00001810;geneIDs=comp137851_c0_seq1.path1;transcripts=comp137851_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30335893	30336557	.	+	.	ID=comp137851_c0_seq1.mrna1;geneID=comp137851_c0_seq1.path1;Name=comp137851_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=665;mismatches=0;indels=0;unknowns=0;Target=comp137851_c0_seq1 665 1 .;CDS_Target=comp137851_c0_seq1 629 492 .;locus=RLOC_00001810
ChrX	stalkie_big_nohaplotig	exon	30335893	30336557	100	+	.	Parent=comp137851_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30336384	30336521	.	+	0	Parent=comp137851_c0_seq1.mrna1
ChrX	gffcl	locus	30367395	30372580	.	-	.	ID=RLOC_00001811;geneIDs=comp142693_c0_seq1.path1;transcripts=comp142693_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30367395	30372580	.	-	.	ID=comp142693_c0_seq1.mrna1;geneID=comp142693_c0_seq1.path1;Name=comp142693_c0_seq1;Dir=sensecoverage=96.0;identity=99.8;matches=550;mismatches=0;indels=1;unknowns=0;Target=comp142693_c0_seq1 222 329 +;locus=RLOC_00001811
ChrX	stalkie_big_nohaplotig	exon	30367395	30367417	100	-	.	Parent=comp142693_c0_seq1.mrna1;Target=comp142693_c0_seq1 552 574 +
ChrX	stalkie_big_nohaplotig	exon	30372054	30372580	99	-	.	Parent=comp142693_c0_seq1.mrna1;Target=comp142693_c0_seq1 24 551 +
ChrX	stalkie_big_nohaplotig	CDS	30372276	30372382	.	-	0	Parent=comp142693_c0_seq1.mrna1
ChrX	gffcl	locus	30377195	30378142	.	-	.	ID=RLOC_00001812;geneIDs=ORF1962.path1;transcripts=ORF1962.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30377195	30378142	.	-	.	ID=ORF1962.mrna1;geneID=ORF1962.path1;Name=ORF1962;Dir=indeterminatecoverage=99.7;identity=100.0;matches=948;mismatches=0;indels=0;unknowns=0;Target=ORF1962 948 1 .;locus=RLOC_00001812
ChrX	stalkie_big_nohaplotig	exon	30377195	30378142	100	-	.	Parent=ORF1962.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30377195	30378142	.	-	0	Parent=ORF1962.mrna1
ChrX	gffcl	locus	30387048	30389569	.	-	.	ID=RLOC_00001813;geneIDs=comp159735_c0_seq1.path1;transcripts=comp159735_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30387048	30389569	.	-	.	ID=comp159735_c0_seq1.mrna1;geneID=comp159735_c0_seq1.path1;Name=comp159735_c0_seq1;Dir=antisensecoverage=100.0;identity=98.2;matches=2449;mismatches=10;indels=36;unknowns=0;Target=comp159735_c0_seq1 1062 1208 .;locus=RLOC_00001813
ChrX	stalkie_big_nohaplotig	exon	30387048	30388765	97	-	.	Parent=comp159735_c0_seq1.mrna1;Target=comp159735_c0_seq1 1 1752 -
ChrX	stalkie_big_nohaplotig	exon	30388819	30389032	99	-	.	Parent=comp159735_c0_seq1.mrna1;Target=comp159735_c0_seq1 1753 1967 -
ChrX	stalkie_big_nohaplotig	exon	30389043	30389569	98	-	.	Parent=comp159735_c0_seq1.mrna1;Target=comp159735_c0_seq1 2023 2550 -
ChrX	stalkie_big_nohaplotig	CDS	30388075	30388221	.	-	0	Parent=comp159735_c0_seq1.mrna1
ChrX	gffcl	locus	30390575	30391491	.	-	.	ID=RLOC_00001814;geneIDs=comp154208_c0_seq1.path1;transcripts=comp154208_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30390575	30391491	.	-	.	ID=comp154208_c0_seq1.mrna1;geneID=comp154208_c0_seq1.path1;Name=comp154208_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=915;mismatches=2;indels=0;unknowns=0;Target=comp154208_c0_seq1 917 1 .;CDS_Target=comp154208_c0_seq1 727 563 .;locus=RLOC_00001814
ChrX	stalkie_big_nohaplotig	exon	30390575	30391491	99	-	.	Parent=comp154208_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30390765	30390929	.	-	0	Parent=comp154208_c0_seq1.mrna1
ChrX	gffcl	locus	30392490	30392915	.	+	.	ID=RLOC_00001815;geneIDs=comp1333628_c0_seq1.path1;transcripts=comp1333628_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30392490	30392915	.	+	.	ID=comp1333628_c0_seq1.mrna1;geneID=comp1333628_c0_seq1.path1;Name=comp1333628_c0_seq1;Dir=indeterminatecoverage=97.7;identity=99.5;matches=424;mismatches=2;indels=0;unknowns=0;Target=comp1333628_c0_seq1 436 11 .;CDS_Target=comp1333628_c0_seq1 296 171 .;locus=RLOC_00001815
ChrX	stalkie_big_nohaplotig	exon	30392490	30392915	99	+	.	Parent=comp1333628_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30392650	30392775	.	+	0	Parent=comp1333628_c0_seq1.mrna1
ChrX	gffcl	locus	30393306	30394248	.	-	.	ID=RLOC_00001816;geneIDs=ORF2864.path1;transcripts=ORF2864.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30393306	30394248	.	-	.	ID=ORF2864.mrna1;geneID=ORF2864.path1;Name=ORF2864;Dir=sensecoverage=97.4;identity=98.1;matches=759;mismatches=3;indels=12;unknowns=0;locus=RLOC_00001816
ChrX	stalkie_big_nohaplotig	exon	30393306	30393494	93	-	.	Parent=ORF2864.mrna1;Target=ORF2864 595 795 +
ChrX	stalkie_big_nohaplotig	exon	30393676	30394248	99	-	.	Parent=ORF2864.mrna1;Target=ORF2864 22 594 +
ChrX	stalkie_big_nohaplotig	CDS	30393306	30393494	.	-	0	Parent=ORF2864.mrna1;Target=ORF2864 595 795 +
ChrX	stalkie_big_nohaplotig	CDS	30393676	30394248	.	-	0	Parent=ORF2864.mrna1;Target=ORF2864 22 594 +
ChrX	stalkie_big_nohaplotig	mRNA	30458244	30458692	.	-	.	ID=comp112694_c0_seq1.mrna1;geneID=comp112694_c0_seq1.path1;Name=comp112694_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=449;mismatches=0;indels=0;unknowns=0;Target=comp112694_c0_seq1 449 1 .;CDS_Target=comp112694_c0_seq1 245 78 .;locus=RLOC_00001818
ChrX	stalkie_big_nohaplotig	exon	30458244	30458692	100	-	.	Parent=comp112694_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30458448	30458615	.	-	0	Parent=comp112694_c0_seq1.mrna1
ChrX	gffcl	locus	30451808	30453835	.	-	.	ID=RLOC_00001819;geneIDs=comp148309_c0_seq1.path1;transcripts=comp148309_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30451808	30453835	.	-	.	ID=comp148309_c0_seq1.mrna1;geneID=comp148309_c0_seq1.path1;Name=comp148309_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2028;mismatches=0;indels=1;unknowns=0;Target=comp148309_c0_seq1 2029 1 .;CDS_Target=comp148309_c0_seq1 124 2 .;locus=RLOC_00001819
ChrX	stalkie_big_nohaplotig	exon	30451808	30453835	99	-	.	Parent=comp148309_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30453712	30453834	.	-	0	Parent=comp148309_c0_seq1.mrna1
ChrX	gffcl	locus	30473783	30477059	.	-	.	ID=RLOC_00001820;geneIDs=ORF1222.path1,comp151846_c0_seq1.path1;transcripts=comp151846_c0_seq1.mrna1,ORF1222.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30473783	30477059	.	-	.	ID=comp151846_c0_seq1.mrna1;geneID=comp151846_c0_seq1.path1;Name=comp151846_c0_seq1;Dir=sensecoverage=98.9;identity=99.9;matches=1840;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001820
ChrX	stalkie_big_nohaplotig	exon	30473783	30474338	100	-	.	Parent=comp151846_c0_seq1.mrna1;Target=comp151846_c0_seq1 1287 1842 +
ChrX	stalkie_big_nohaplotig	exon	30475117	30475302	100	-	.	Parent=comp151846_c0_seq1.mrna1;Target=comp151846_c0_seq1 1101 1286 +
ChrX	stalkie_big_nohaplotig	exon	30475961	30477059	99	-	.	Parent=comp151846_c0_seq1.mrna1;Target=comp151846_c0_seq1 2 1100 +
ChrX	stalkie_big_nohaplotig	CDS	30474057	30474338	.	-	0	Parent=comp151846_c0_seq1.mrna1;Target=comp151846_c0_seq1 1287 1568 +
ChrX	stalkie_big_nohaplotig	CDS	30475117	30475302	.	-	0	Parent=comp151846_c0_seq1.mrna1;Target=comp151846_c0_seq1 1101 1286 +
ChrX	stalkie_big_nohaplotig	CDS	30475961	30476857	.	-	0	Parent=comp151846_c0_seq1.mrna1;Target=comp151846_c0_seq1 204 1100 +
ChrX	stalkie_big_nohaplotig	mRNA	30474060	30476860	.	-	.	ID=ORF1222.mrna1;geneID=ORF1222.path1;Name=ORF1222;Dir=sensecoverage=100.0;identity=100.0;matches=1179;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001820
ChrX	stalkie_big_nohaplotig	exon	30474060	30474338	100	-	.	Parent=ORF1222.mrna1;Target=ORF1222 901 1179 +
ChrX	stalkie_big_nohaplotig	exon	30475961	30476860	100	-	.	Parent=ORF1222.mrna1;Target=ORF1222 1 900 +
ChrX	stalkie_big_nohaplotig	CDS	30474060	30474338	.	-	0	Parent=ORF1222.mrna1;Target=ORF1222 901 1179 +
ChrX	stalkie_big_nohaplotig	CDS	30475961	30476860	.	-	0	Parent=ORF1222.mrna1;Target=ORF1222 1 900 +
ChrX	gffcl	locus	30494238	30497666	.	-	.	ID=RLOC_00001821;geneIDs=ORF1010.path1,comp152883_c2_seq1.path1;transcripts=comp152883_c2_seq1.mrna1,ORF1010.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30494238	30497666	.	-	.	ID=comp152883_c2_seq1.mrna1;geneID=comp152883_c2_seq1.path1;Name=comp152883_c2_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=1624;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001821
ChrX	stalkie_big_nohaplotig	exon	30494238	30494844	100	-	.	Parent=comp152883_c2_seq1.mrna1;Target=comp152883_c2_seq1 1 607 -
ChrX	stalkie_big_nohaplotig	exon	30495564	30495636	100	-	.	Parent=comp152883_c2_seq1.mrna1;Target=comp152883_c2_seq1 608 680 -
ChrX	stalkie_big_nohaplotig	exon	30496210	30496369	100	-	.	Parent=comp152883_c2_seq1.mrna1;Target=comp152883_c2_seq1 681 840 -
ChrX	stalkie_big_nohaplotig	exon	30496431	30496638	100	-	.	Parent=comp152883_c2_seq1.mrna1;Target=comp152883_c2_seq1 841 1048 -
ChrX	stalkie_big_nohaplotig	exon	30496698	30496845	100	-	.	Parent=comp152883_c2_seq1.mrna1;Target=comp152883_c2_seq1 1049 1196 -
ChrX	stalkie_big_nohaplotig	exon	30497124	30497297	100	-	.	Parent=comp152883_c2_seq1.mrna1;Target=comp152883_c2_seq1 1197 1370 -
ChrX	stalkie_big_nohaplotig	exon	30497360	30497536	100	-	.	Parent=comp152883_c2_seq1.mrna1;Target=comp152883_c2_seq1 1371 1547 -
ChrX	stalkie_big_nohaplotig	exon	30497590	30497666	100	-	.	Parent=comp152883_c2_seq1.mrna1;Target=comp152883_c2_seq1 1548 1624 -
ChrX	stalkie_big_nohaplotig	CDS	30494563	30494844	.	-	0	Parent=comp152883_c2_seq1.mrna1;Target=comp152883_c2_seq1 326 607 .
ChrX	stalkie_big_nohaplotig	CDS	30495564	30495636	.	-	1	Parent=comp152883_c2_seq1.mrna1;Target=comp152883_c2_seq1 608 680 .
ChrX	stalkie_big_nohaplotig	CDS	30496210	30496280	.	-	0	Parent=comp152883_c2_seq1.mrna1;Target=comp152883_c2_seq1 681 751 .
ChrX	stalkie_big_nohaplotig	mRNA	30494566	30497665	.	-	.	ID=ORF1010.mrna1;geneID=ORF1010.path1;Name=ORF1010;Dir=sensecoverage=100.0;identity=100.0;matches=1281;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001821
ChrX	stalkie_big_nohaplotig	exon	30494566	30494844	100	-	.	Parent=ORF1010.mrna1;Target=ORF1010 1003 1281 +
ChrX	stalkie_big_nohaplotig	exon	30495564	30495636	100	-	.	Parent=ORF1010.mrna1;Target=ORF1010 930 1002 +
ChrX	stalkie_big_nohaplotig	exon	30496210	30496369	100	-	.	Parent=ORF1010.mrna1;Target=ORF1010 770 929 +
ChrX	stalkie_big_nohaplotig	exon	30496431	30496638	100	-	.	Parent=ORF1010.mrna1;Target=ORF1010 562 769 +
ChrX	stalkie_big_nohaplotig	exon	30496698	30496845	100	-	.	Parent=ORF1010.mrna1;Target=ORF1010 414 561 +
ChrX	stalkie_big_nohaplotig	exon	30497138	30497297	100	-	.	Parent=ORF1010.mrna1;Target=ORF1010 254 413 +
ChrX	stalkie_big_nohaplotig	exon	30497360	30497536	100	-	.	Parent=ORF1010.mrna1;Target=ORF1010 77 253 +
ChrX	stalkie_big_nohaplotig	exon	30497590	30497665	100	-	.	Parent=ORF1010.mrna1;Target=ORF1010 1 76 +
ChrX	stalkie_big_nohaplotig	CDS	30494566	30494844	.	-	0	Parent=ORF1010.mrna1;Target=ORF1010 1003 1281 +
ChrX	stalkie_big_nohaplotig	CDS	30495564	30495636	.	-	1	Parent=ORF1010.mrna1;Target=ORF1010 930 1002 +
ChrX	stalkie_big_nohaplotig	CDS	30496210	30496369	.	-	2	Parent=ORF1010.mrna1;Target=ORF1010 770 929 +
ChrX	stalkie_big_nohaplotig	CDS	30496431	30496638	.	-	0	Parent=ORF1010.mrna1;Target=ORF1010 562 769 +
ChrX	stalkie_big_nohaplotig	CDS	30496698	30496845	.	-	1	Parent=ORF1010.mrna1;Target=ORF1010 414 561 +
ChrX	stalkie_big_nohaplotig	CDS	30497138	30497297	.	-	2	Parent=ORF1010.mrna1;Target=ORF1010 254 413 +
ChrX	stalkie_big_nohaplotig	CDS	30497360	30497536	.	-	2	Parent=ORF1010.mrna1;Target=ORF1010 77 253 +
ChrX	stalkie_big_nohaplotig	CDS	30497590	30497665	.	-	0	Parent=ORF1010.mrna1;Target=ORF1010 1 76 +
ChrX	gffcl	locus	30499224	30502176	.	-	.	ID=RLOC_00001822;geneIDs=FBgn0031397.1.path1;transcripts=FBgn0031397.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30499224	30502176	.	-	.	ID=FBgn0031397.1.mrna1;geneID=FBgn0031397.1.path1;Name=FBgn0031397.1;Dir=sensecoverage=100.0;identity=100.0;matches=1764;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001822
ChrX	stalkie_big_nohaplotig	exon	30499224	30499385	100	-	.	Parent=FBgn0031397.1.mrna1;Target=FBgn0031397.1 1603 1764 +
ChrX	stalkie_big_nohaplotig	exon	30499453	30500482	100	-	.	Parent=FBgn0031397.1.mrna1;Target=FBgn0031397.1 573 1602 +
ChrX	stalkie_big_nohaplotig	exon	30501152	30501289	100	-	.	Parent=FBgn0031397.1.mrna1;Target=FBgn0031397.1 435 572 +
ChrX	stalkie_big_nohaplotig	exon	30501666	30501981	100	-	.	Parent=FBgn0031397.1.mrna1;Target=FBgn0031397.1 119 434 +
ChrX	stalkie_big_nohaplotig	exon	30502059	30502176	100	-	.	Parent=FBgn0031397.1.mrna1;Target=FBgn0031397.1 1 118 +
ChrX	stalkie_big_nohaplotig	CDS	30499224	30499385	.	-	0	Parent=FBgn0031397.1.mrna1;Target=FBgn0031397.1 1603 1764 +
ChrX	stalkie_big_nohaplotig	CDS	30499453	30500482	.	-	1	Parent=FBgn0031397.1.mrna1;Target=FBgn0031397.1 573 1602 +
ChrX	stalkie_big_nohaplotig	CDS	30501152	30501289	.	-	1	Parent=FBgn0031397.1.mrna1;Target=FBgn0031397.1 435 572 +
ChrX	stalkie_big_nohaplotig	CDS	30501666	30501981	.	-	2	Parent=FBgn0031397.1.mrna1;Target=FBgn0031397.1 119 434 +
ChrX	stalkie_big_nohaplotig	CDS	30502059	30502176	.	-	0	Parent=FBgn0031397.1.mrna1;Target=FBgn0031397.1 1 118 +
ChrX	gffcl	locus	30509905	30510703	.	-	.	ID=RLOC_00001824;geneIDs=FBgn0085203.1.path1;transcripts=FBgn0085203.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30509905	30510703	.	-	.	ID=FBgn0085203.1.mrna1;geneID=FBgn0085203.1.path1;Name=FBgn0085203.1;Dir=sensecoverage=100.0;identity=100.0;matches=684;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001824
ChrX	stalkie_big_nohaplotig	exon	30509905	30510035	100	-	.	Parent=FBgn0085203.1.mrna1;Target=FBgn0085203.1 554 684 +
ChrX	stalkie_big_nohaplotig	exon	30510091	30510540	100	-	.	Parent=FBgn0085203.1.mrna1;Target=FBgn0085203.1 104 553 +
ChrX	stalkie_big_nohaplotig	exon	30510601	30510703	100	-	.	Parent=FBgn0085203.1.mrna1;Target=FBgn0085203.1 1 103 +
ChrX	stalkie_big_nohaplotig	CDS	30509905	30510035	.	-	2	Parent=FBgn0085203.1.mrna1;Target=FBgn0085203.1 554 684 +
ChrX	stalkie_big_nohaplotig	CDS	30510091	30510540	.	-	2	Parent=FBgn0085203.1.mrna1;Target=FBgn0085203.1 104 553 +
ChrX	stalkie_big_nohaplotig	CDS	30510601	30510703	.	-	0	Parent=FBgn0085203.1.mrna1;Target=FBgn0085203.1 1 103 +
ChrX	gffcl	locus	30511221	30511970	.	-	.	ID=RLOC_00001825;geneIDs=comp136584_c0_seq1.path1;transcripts=comp136584_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30511221	30511970	.	-	.	ID=comp136584_c0_seq1.mrna1;geneID=comp136584_c0_seq1.path1;Name=comp136584_c0_seq1;Dir=sensecoverage=99.9;identity=100.0;matches=669;mismatches=0;indels=0;unknowns=0;Target=comp136584_c0_seq1 2 154 +;locus=RLOC_00001825
ChrX	stalkie_big_nohaplotig	exon	30511221	30511667	100	-	.	Parent=comp136584_c0_seq1.mrna1;Target=comp136584_c0_seq1 223 669 +
ChrX	stalkie_big_nohaplotig	exon	30511749	30511970	100	-	.	Parent=comp136584_c0_seq1.mrna1;Target=comp136584_c0_seq1 1 222 +
ChrX	stalkie_big_nohaplotig	CDS	30511817	30511969	.	-	0	Parent=comp136584_c0_seq1.mrna1
ChrX	gffcl	locus	30528450	30529066	.	+	.	ID=RLOC_00001826;geneIDs=comp138103_c0_seq1.path1;transcripts=comp138103_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30528450	30529066	.	+	.	ID=comp138103_c0_seq1.mrna1;geneID=comp138103_c0_seq1.path1;Name=comp138103_c0_seq1;Dir=sensecoverage=99.8;identity=99.2;matches=489;mismatches=2;indels=2;unknowns=0;Target=comp138103_c0_seq1 258 329 +;locus=RLOC_00001826
ChrX	stalkie_big_nohaplotig	exon	30528450	30528487	100	+	.	Parent=comp138103_c0_seq1.mrna1;Target=comp138103_c0_seq1 1 38 +
ChrX	stalkie_big_nohaplotig	exon	30528614	30529066	99	+	.	Parent=comp138103_c0_seq1.mrna1;Target=comp138103_c0_seq1 39 493 +
ChrX	stalkie_big_nohaplotig	CDS	30528833	30528904	.	+	0	Parent=comp138103_c0_seq1.mrna1
ChrX	gffcl	locus	30537436	30538267	.	+	.	ID=RLOC_00001828;geneIDs=comp163411_c6_seq1.path2;transcripts=comp163411_c6_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	30537436	30538267	.	+	.	ID=comp163411_c6_seq1.mrna2;geneID=comp163411_c6_seq1.path2;Name=comp163411_c6_seq1;Dir=indeterminatecoverage=31.3;identity=99.9;matches=831;mismatches=1;indels=0;unknowns=0;Target=comp163411_c6_seq1 2655 1824 .;locus=RLOC_00001828
ChrX	stalkie_big_nohaplotig	exon	30537436	30538267	99	+	.	Parent=comp163411_c6_seq1.mrna2
ChrX	gffcl	locus	30543787	30586602	.	-	.	ID=RLOC_00001829;geneIDs=FBgn0004177.1.path1;transcripts=FBgn0004177.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30543787	30586602	.	-	.	ID=FBgn0004177.1.mrna1;geneID=FBgn0004177.1.path1;Name=FBgn0004177.1;Dir=sensecoverage=100.0;identity=100.0;matches=1014;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001829
ChrX	stalkie_big_nohaplotig	exon	30543787	30543856	100	-	.	Parent=FBgn0004177.1.mrna1;Target=FBgn0004177.1 945 1014 +
ChrX	stalkie_big_nohaplotig	exon	30550710	30550900	100	-	.	Parent=FBgn0004177.1.mrna1;Target=FBgn0004177.1 754 944 +
ChrX	stalkie_big_nohaplotig	exon	30550970	30551533	100	-	.	Parent=FBgn0004177.1.mrna1;Target=FBgn0004177.1 190 753 +
ChrX	stalkie_big_nohaplotig	exon	30586414	30586602	100	-	.	Parent=FBgn0004177.1.mrna1;Target=FBgn0004177.1 1 189 +
ChrX	stalkie_big_nohaplotig	CDS	30543787	30543856	.	-	1	Parent=FBgn0004177.1.mrna1;Target=FBgn0004177.1 945 1014 +
ChrX	stalkie_big_nohaplotig	CDS	30550710	30550900	.	-	0	Parent=FBgn0004177.1.mrna1;Target=FBgn0004177.1 754 944 +
ChrX	stalkie_big_nohaplotig	CDS	30550970	30551533	.	-	0	Parent=FBgn0004177.1.mrna1;Target=FBgn0004177.1 190 753 +
ChrX	stalkie_big_nohaplotig	CDS	30586414	30586602	.	-	0	Parent=FBgn0004177.1.mrna1;Target=FBgn0004177.1 1 189 +
ChrX	gffcl	locus	30566773	30566826	.	-	.	ID=RLOC_00001830;geneIDs=comp143957_c0_seq1.path2;transcripts=comp143957_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	30566773	30566826	.	-	.	ID=comp143957_c0_seq1.mrna2;geneID=comp143957_c0_seq1.path2;Name=comp143957_c0_seq1;Dir=indeterminatecoverage=14.4;identity=100.0;matches=54;mismatches=0;indels=0;unknowns=0;Target=comp143957_c0_seq1 376 323 .;locus=RLOC_00001830
ChrX	stalkie_big_nohaplotig	exon	30566773	30566826	100	-	.	Parent=comp143957_c0_seq1.mrna2
ChrX	gffcl	locus	30583641	30584231	.	+	.	ID=RLOC_00001831;geneIDs=comp152110_c0_seq1.path1;transcripts=comp152110_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30583641	30584231	.	+	.	ID=comp152110_c0_seq1.mrna1;geneID=comp152110_c0_seq1.path1;Name=comp152110_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.6;matches=583;mismatches=6;indels=2;unknowns=0;Target=comp152110_c0_seq1 589 1 .;CDS_Target=comp152110_c0_seq1 167 3 .;locus=RLOC_00001831
ChrX	stalkie_big_nohaplotig	exon	30583641	30584231	98	+	.	Parent=comp152110_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30583643	30583809	.	+	0	Parent=comp152110_c0_seq1.mrna1
ChrX	gffcl	locus	30594540	30595139	.	+	.	ID=RLOC_00001832;geneIDs=FBgn0020618.2.path1;transcripts=FBgn0020618.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30594540	30595139	.	+	.	ID=FBgn0020618.2.mrna1;geneID=FBgn0020618.2.path1;Name=FBgn0020618.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=600;mismatches=0;indels=0;unknowns=0;Target=FBgn0020618.2 600 1 .;locus=RLOC_00001832
ChrX	stalkie_big_nohaplotig	exon	30594540	30595139	100	+	.	Parent=FBgn0020618.2.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30594540	30595139	.	+	0	Parent=FBgn0020618.2.mrna1
ChrX	gffcl	locus	30603581	30605310	.	+	.	ID=RLOC_00001833;geneIDs=FBgn0020618.3.path1,comp135064_c0_seq1.path1;transcripts=FBgn0020618.3.mrna1,comp135064_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30603581	30605310	.	+	.	ID=FBgn0020618.3.mrna1;geneID=FBgn0020618.3.path1;Name=FBgn0020618.3;Dir=sensecoverage=100.0;identity=100.0;matches=966;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001833
ChrX	stalkie_big_nohaplotig	exon	30603581	30603701	100	+	.	Parent=FBgn0020618.3.mrna1;Target=FBgn0020618.3 1 121 +
ChrX	stalkie_big_nohaplotig	exon	30603857	30604068	100	+	.	Parent=FBgn0020618.3.mrna1;Target=FBgn0020618.3 122 333 +
ChrX	stalkie_big_nohaplotig	exon	30604678	30605310	100	+	.	Parent=FBgn0020618.3.mrna1;Target=FBgn0020618.3 334 966 +
ChrX	stalkie_big_nohaplotig	CDS	30603581	30603701	.	+	0	Parent=FBgn0020618.3.mrna1;Target=FBgn0020618.3 1 121 +
ChrX	stalkie_big_nohaplotig	CDS	30603857	30604068	.	+	2	Parent=FBgn0020618.3.mrna1;Target=FBgn0020618.3 122 333 +
ChrX	stalkie_big_nohaplotig	CDS	30604678	30605310	.	+	0	Parent=FBgn0020618.3.mrna1;Target=FBgn0020618.3 334 966 +
ChrX	stalkie_big_nohaplotig	mRNA	30604046	30604699	.	+	.	ID=comp135064_c0_seq1.mrna1;geneID=comp135064_c0_seq1.path1;Name=comp135064_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=651;mismatches=3;indels=2;unknowns=0;Target=comp135064_c0_seq1 656 1 .;CDS_Target=comp135064_c0_seq1 655 536 .;locus=RLOC_00001833
ChrX	stalkie_big_nohaplotig	exon	30604046	30604699	99	+	.	Parent=comp135064_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30604579	30604698	.	+	0	Parent=comp135064_c0_seq1.mrna1
ChrX	gffcl	locus	30649695	30652101	.	+	.	ID=RLOC_00001835;geneIDs=comp157996_c1_seq1.path1;transcripts=comp157996_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30649695	30652101	.	+	.	ID=comp157996_c1_seq1.mrna1;geneID=comp157996_c1_seq1.path1;Name=comp157996_c1_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=904;mismatches=1;indels=0;unknowns=0;Target=comp157996_c1_seq1 99 257 +;locus=RLOC_00001835
ChrX	stalkie_big_nohaplotig	exon	30649695	30650119	100	+	.	Parent=comp157996_c1_seq1.mrna1;Target=comp157996_c1_seq1 1 425 +
ChrX	stalkie_big_nohaplotig	exon	30650173	30650232	100	+	.	Parent=comp157996_c1_seq1.mrna1;Target=comp157996_c1_seq1 426 485 +
ChrX	stalkie_big_nohaplotig	exon	30651682	30652101	99	+	.	Parent=comp157996_c1_seq1.mrna1;Target=comp157996_c1_seq1 486 905 +
ChrX	stalkie_big_nohaplotig	CDS	30649793	30649951	.	+	0	Parent=comp157996_c1_seq1.mrna1
ChrX	gffcl	locus	30664422	30667797	.	+	.	ID=RLOC_00001836;geneIDs=FBgn0038795.1.path1;transcripts=FBgn0038795.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30664422	30667797	.	+	.	ID=FBgn0038795.1.mrna1;geneID=FBgn0038795.1.path1;Name=FBgn0038795.1;Dir=sensecoverage=100.0;identity=100.0;matches=1110;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001836
ChrX	stalkie_big_nohaplotig	exon	30664422	30664626	100	+	.	Parent=FBgn0038795.1.mrna1;Target=FBgn0038795.1 1 205 +
ChrX	stalkie_big_nohaplotig	exon	30666893	30667797	100	+	.	Parent=FBgn0038795.1.mrna1;Target=FBgn0038795.1 206 1110 +
ChrX	stalkie_big_nohaplotig	CDS	30664422	30664626	.	+	0	Parent=FBgn0038795.1.mrna1;Target=FBgn0038795.1 1 205 +
ChrX	stalkie_big_nohaplotig	CDS	30666893	30667797	.	+	2	Parent=FBgn0038795.1.mrna1;Target=FBgn0038795.1 206 1110 +
ChrX	gffcl	locus	30675633	30680273	.	-	.	ID=RLOC_00001837;geneIDs=ORF1162.path1;transcripts=ORF1162.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30675633	30680273	.	-	.	ID=ORF1162.mrna1;geneID=ORF1162.path1;Name=ORF1162;Dir=sensecoverage=98.7;identity=100.0;matches=1187;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001837
ChrX	stalkie_big_nohaplotig	exon	30675633	30675656	100	-	.	Parent=ORF1162.mrna1;Target=ORF1162 1180 1203 +
ChrX	stalkie_big_nohaplotig	exon	30676850	30676960	100	-	.	Parent=ORF1162.mrna1;Target=ORF1162 1069 1179 +
ChrX	stalkie_big_nohaplotig	exon	30677810	30678001	100	-	.	Parent=ORF1162.mrna1;Target=ORF1162 877 1068 +
ChrX	stalkie_big_nohaplotig	exon	30678058	30678198	100	-	.	Parent=ORF1162.mrna1;Target=ORF1162 736 876 +
ChrX	stalkie_big_nohaplotig	exon	30679348	30679443	100	-	.	Parent=ORF1162.mrna1;Target=ORF1162 640 735 +
ChrX	stalkie_big_nohaplotig	exon	30679516	30679713	100	-	.	Parent=ORF1162.mrna1;Target=ORF1162 442 639 +
ChrX	stalkie_big_nohaplotig	exon	30679772	30679994	100	-	.	Parent=ORF1162.mrna1;Target=ORF1162 219 441 +
ChrX	stalkie_big_nohaplotig	exon	30680072	30680273	100	-	.	Parent=ORF1162.mrna1;Target=ORF1162 17 218 +
ChrX	stalkie_big_nohaplotig	CDS	30675633	30675656	.	-	0	Parent=ORF1162.mrna1;Target=ORF1162 1180 1203 +
ChrX	stalkie_big_nohaplotig	CDS	30676850	30676960	.	-	0	Parent=ORF1162.mrna1;Target=ORF1162 1069 1179 +
ChrX	stalkie_big_nohaplotig	CDS	30677810	30678001	.	-	0	Parent=ORF1162.mrna1;Target=ORF1162 877 1068 +
ChrX	stalkie_big_nohaplotig	CDS	30678058	30678198	.	-	0	Parent=ORF1162.mrna1;Target=ORF1162 736 876 +
ChrX	stalkie_big_nohaplotig	CDS	30679348	30679443	.	-	0	Parent=ORF1162.mrna1;Target=ORF1162 640 735 +
ChrX	stalkie_big_nohaplotig	CDS	30679516	30679713	.	-	0	Parent=ORF1162.mrna1;Target=ORF1162 442 639 +
ChrX	stalkie_big_nohaplotig	CDS	30679772	30679994	.	-	1	Parent=ORF1162.mrna1;Target=ORF1162 219 441 +
ChrX	stalkie_big_nohaplotig	CDS	30680072	30680271	.	-	0	Parent=ORF1162.mrna1;Target=ORF1162 19 218 +
ChrX	gffcl	locus	30708378	30709486	.	+	.	ID=RLOC_00001838;geneIDs=comp158057_c0_seq1.path1;transcripts=comp158057_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30708378	30709486	.	+	.	ID=comp158057_c0_seq1.mrna1;geneID=comp158057_c0_seq1.path1;Name=comp158057_c0_seq1;Dir=antisensecoverage=96.0;identity=100.0;matches=970;mismatches=0;indels=0;unknowns=0;Target=comp158057_c0_seq1 372 497 .;locus=RLOC_00001838
ChrX	stalkie_big_nohaplotig	exon	30708378	30708775	100	+	.	Parent=comp158057_c0_seq1.mrna1;Target=comp158057_c0_seq1 613 1010 -
ChrX	stalkie_big_nohaplotig	exon	30708842	30708922	100	+	.	Parent=comp158057_c0_seq1.mrna1;Target=comp158057_c0_seq1 532 612 -
ChrX	stalkie_big_nohaplotig	exon	30708996	30709486	100	+	.	Parent=comp158057_c0_seq1.mrna1;Target=comp158057_c0_seq1 41 531 -
ChrX	stalkie_big_nohaplotig	CDS	30709030	30709155	.	+	0	Parent=comp158057_c0_seq1.mrna1
ChrX	gffcl	locus	30709823	30710120	.	-	.	ID=RLOC_00001839;geneIDs=comp137130_c0_seq1.path1;transcripts=comp137130_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30709823	30710120	.	-	.	ID=comp137130_c0_seq1.mrna1;geneID=comp137130_c0_seq1.path1;Name=comp137130_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=297;mismatches=1;indels=0;unknowns=0;Target=comp137130_c0_seq1 298 1 .;CDS_Target=comp137130_c0_seq1 287 198 .;locus=RLOC_00001839
ChrX	stalkie_big_nohaplotig	exon	30709823	30710120	99	-	.	Parent=comp137130_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30709834	30709923	.	-	0	Parent=comp137130_c0_seq1.mrna1
ChrX	gffcl	locus	30715270	30715930	.	+	.	ID=RLOC_00001840;geneIDs=FBgn0032431.3.path1;transcripts=FBgn0032431.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30715270	30715930	.	+	.	ID=FBgn0032431.3.mrna1;geneID=FBgn0032431.3.path1;Name=FBgn0032431.3;Dir=sensecoverage=100.0;identity=100.0;matches=585;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001840
ChrX	stalkie_big_nohaplotig	exon	30715270	30715723	100	+	.	Parent=FBgn0032431.3.mrna1;Target=FBgn0032431.3 1 454 +
ChrX	stalkie_big_nohaplotig	exon	30715800	30715930	100	+	.	Parent=FBgn0032431.3.mrna1;Target=FBgn0032431.3 455 585 +
ChrX	stalkie_big_nohaplotig	CDS	30715270	30715723	.	+	0	Parent=FBgn0032431.3.mrna1;Target=FBgn0032431.3 1 454 +
ChrX	stalkie_big_nohaplotig	CDS	30715800	30715930	.	+	2	Parent=FBgn0032431.3.mrna1;Target=FBgn0032431.3 455 585 +
ChrX	gffcl	locus	30717815	30718777	.	+	.	ID=RLOC_00001841;geneIDs=comp149886_c0_seq1.path1;transcripts=comp149886_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30717815	30718777	.	+	.	ID=comp149886_c0_seq1.mrna1;geneID=comp149886_c0_seq1.path1;Name=comp149886_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=961;mismatches=2;indels=0;unknowns=0;Target=comp149886_c0_seq1 963 1 .;CDS_Target=comp149886_c0_seq1 926 834 .;locus=RLOC_00001841
ChrX	stalkie_big_nohaplotig	exon	30717815	30718777	99	+	.	Parent=comp149886_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30718648	30718740	.	+	0	Parent=comp149886_c0_seq1.mrna1
ChrX	gffcl	locus	30718982	30786594	.	+	.	ID=RLOC_00001842;geneIDs=FBgn0260486.1.path1,comp159237_c2_seq1.path1;transcripts=FBgn0260486.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30719030	30786594	.	+	.	ID=FBgn0260486.1.mrna1;geneID=FBgn0260486.1.path1;Name=FBgn0260486.1;Dir=sensecoverage=100.0;identity=100.0;matches=5538;mismatches=1;indels=0;unknowns=2;locus=RLOC_00001842
ChrX	stalkie_big_nohaplotig	exon	30719030	30719158	100	+	.	Parent=FBgn0260486.1.mrna1;Target=FBgn0260486.1 1 129 +
ChrX	stalkie_big_nohaplotig	exon	30777314	30777430	100	+	.	Parent=FBgn0260486.1.mrna1;Target=FBgn0260486.1 130 246 +
ChrX	stalkie_big_nohaplotig	exon	30777488	30778029	100	+	.	Parent=FBgn0260486.1.mrna1;Target=FBgn0260486.1 247 788 +
ChrX	stalkie_big_nohaplotig	exon	30778104	30778289	100	+	.	Parent=FBgn0260486.1.mrna1;Target=FBgn0260486.1 789 974 +
ChrX	stalkie_big_nohaplotig	exon	30779875	30779992	100	+	.	Parent=FBgn0260486.1.mrna1;Target=FBgn0260486.1 975 1092 +
ChrX	stalkie_big_nohaplotig	exon	30780062	30781217	100	+	.	Parent=FBgn0260486.1.mrna1;Target=FBgn0260486.1 1093 2248 +
ChrX	stalkie_big_nohaplotig	exon	30781499	30781749	100	+	.	Parent=FBgn0260486.1.mrna1;Target=FBgn0260486.1 2249 2499 +
ChrX	stalkie_big_nohaplotig	exon	30781834	30782169	100	+	.	Parent=FBgn0260486.1.mrna1;Target=FBgn0260486.1 2500 2835 +
ChrX	stalkie_big_nohaplotig	exon	30783823	30785286	99	+	.	Parent=FBgn0260486.1.mrna1;Target=FBgn0260486.1 2836 4299 +
ChrX	stalkie_big_nohaplotig	exon	30785353	30786594	100	+	.	Parent=FBgn0260486.1.mrna1;Target=FBgn0260486.1 4300 5541 +
ChrX	stalkie_big_nohaplotig	CDS	30719030	30719158	.	+	0	Parent=FBgn0260486.1.mrna1;Target=FBgn0260486.1 1 129 +
ChrX	stalkie_big_nohaplotig	CDS	30777314	30777430	.	+	0	Parent=FBgn0260486.1.mrna1;Target=FBgn0260486.1 130 246 +
ChrX	stalkie_big_nohaplotig	CDS	30777488	30778029	.	+	0	Parent=FBgn0260486.1.mrna1;Target=FBgn0260486.1 247 788 +
ChrX	stalkie_big_nohaplotig	CDS	30778104	30778289	.	+	1	Parent=FBgn0260486.1.mrna1;Target=FBgn0260486.1 789 974 +
ChrX	stalkie_big_nohaplotig	CDS	30779875	30779992	.	+	1	Parent=FBgn0260486.1.mrna1;Target=FBgn0260486.1 975 1092 +
ChrX	stalkie_big_nohaplotig	CDS	30780062	30781217	.	+	0	Parent=FBgn0260486.1.mrna1;Target=FBgn0260486.1 1093 2248 +
ChrX	stalkie_big_nohaplotig	CDS	30781499	30781749	.	+	2	Parent=FBgn0260486.1.mrna1;Target=FBgn0260486.1 2249 2499 +
ChrX	stalkie_big_nohaplotig	CDS	30781834	30782169	.	+	0	Parent=FBgn0260486.1.mrna1;Target=FBgn0260486.1 2500 2835 +
ChrX	stalkie_big_nohaplotig	CDS	30783823	30785286	.	+	0	Parent=FBgn0260486.1.mrna1;Target=FBgn0260486.1 2836 4299 +
ChrX	stalkie_big_nohaplotig	CDS	30785353	30786594	.	+	0	Parent=FBgn0260486.1.mrna1;Target=FBgn0260486.1 4300 5541 +
ChrX	gffcl	locus	30727255	30855255	.	-	.	ID=RLOC_00001843;geneIDs=comp162556_c0_seq1.path1;transcripts=comp162556_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30727255	30855255	.	-	.	ID=comp162556_c0_seq1.mrna1;geneID=comp162556_c0_seq1.path1;Name=comp162556_c0_seq1;Dir=sensecoverage=97.3;identity=98.2;matches=1024;mismatches=19;indels=0;unknowns=0;locus=RLOC_00001843
ChrX	stalkie_big_nohaplotig	exon	30727255	30727398	100	-	.	Parent=comp162556_c0_seq1.mrna1;Target=comp162556_c0_seq1 910 1053 +
ChrX	stalkie_big_nohaplotig	exon	30727507	30727676	100	-	.	Parent=comp162556_c0_seq1.mrna1;Target=comp162556_c0_seq1 740 909 +
ChrX	stalkie_big_nohaplotig	exon	30854527	30855255	97	-	.	Parent=comp162556_c0_seq1.mrna1;Target=comp162556_c0_seq1 11 739 +
ChrX	stalkie_big_nohaplotig	CDS	30727670	30727676	.	-	1	Parent=comp162556_c0_seq1.mrna1;Target=comp162556_c0_seq1 740 746 +
ChrX	stalkie_big_nohaplotig	CDS	30854527	30855116	.	-	0	Parent=comp162556_c0_seq1.mrna1;Target=comp162556_c0_seq1 150 739 +
ChrX	gffcl	locus	30790121	30790671	.	+	.	ID=RLOC_00001844;geneIDs=comp90403_c0_seq1.path1;transcripts=comp90403_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30790121	30790671	.	+	.	ID=comp90403_c0_seq1.mrna1;geneID=comp90403_c0_seq1.path1;Name=comp90403_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=551;mismatches=0;indels=0;unknowns=0;Target=comp90403_c0_seq1 551 1 .;CDS_Target=comp90403_c0_seq1 279 193 .;locus=RLOC_00001844
ChrX	stalkie_big_nohaplotig	exon	30790121	30790671	100	+	.	Parent=comp90403_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30790313	30790399	.	+	0	Parent=comp90403_c0_seq1.mrna1
ChrX	gffcl	locus	30791656	30793147	.	-	.	ID=RLOC_00001845;geneIDs=comp147772_c0_seq1.path1,comp158107_c0_seq1.path1;transcripts=comp158107_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30791656	30792879	.	-	.	ID=comp158107_c0_seq1.mrna1;geneID=comp158107_c0_seq1.path1;Name=comp158107_c0_seq1;Dir=indeterminatecoverage=98.8;identity=100.0;matches=1224;mismatches=0;indels=0;unknowns=0;Target=comp158107_c0_seq1 1224 1 .;CDS_Target=comp158107_c0_seq1 642 478 .;locus=RLOC_00001845
ChrX	stalkie_big_nohaplotig	exon	30791656	30792879	100	-	.	Parent=comp158107_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30792238	30792402	.	-	0	Parent=comp158107_c0_seq1.mrna1
ChrX	gffcl	locus	30794899	30795208	.	-	.	ID=RLOC_00001846;geneIDs=comp105410_c0_seq1.path1;transcripts=comp105410_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30794899	30795208	.	-	.	ID=comp105410_c0_seq1.mrna1;geneID=comp105410_c0_seq1.path1;Name=comp105410_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=310;mismatches=0;indels=0;unknowns=0;Target=comp105410_c0_seq1 310 1 .;CDS_Target=comp105410_c0_seq1 17 3 .;locus=RLOC_00001846
ChrX	stalkie_big_nohaplotig	exon	30794899	30795208	100	-	.	Parent=comp105410_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30795192	30795206	.	-	0	Parent=comp105410_c0_seq1.mrna1
ChrX	gffcl	locus	30798825	30800227	.	-	.	ID=RLOC_00001847;geneIDs=FBgn0031918.1.path1;transcripts=FBgn0031918.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30798825	30800227	.	-	.	ID=FBgn0031918.1.mrna1;geneID=FBgn0031918.1.path1;Name=FBgn0031918.1;Dir=sensecoverage=100.0;identity=100.0;matches=676;mismatches=0;indels=0;unknowns=2;locus=RLOC_00001847
ChrX	stalkie_big_nohaplotig	exon	30798825	30799381	100	-	.	Parent=FBgn0031918.1.mrna1;Target=FBgn0031918.1 122 678 +
ChrX	stalkie_big_nohaplotig	exon	30800107	30800227	100	-	.	Parent=FBgn0031918.1.mrna1;Target=FBgn0031918.1 1 121 +
ChrX	stalkie_big_nohaplotig	CDS	30798825	30799381	.	-	2	Parent=FBgn0031918.1.mrna1;Target=FBgn0031918.1 122 678 +
ChrX	stalkie_big_nohaplotig	CDS	30800107	30800227	.	-	0	Parent=FBgn0031918.1.mrna1;Target=FBgn0031918.1 1 121 +
ChrX	gffcl	locus	30889142	30900404	.	+	.	ID=RLOC_00001848;geneIDs=ORF1703.path1,FBgn0045495.path1;transcripts=ORF1703.mrna1,FBgn0045495.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30889142	30890157	.	+	.	ID=ORF1703.mrna1;geneID=ORF1703.path1;Name=ORF1703;Dir=indeterminatecoverage=99.7;identity=99.8;matches=1015;mismatches=1;indels=1;unknowns=0;Target=ORF1703 1020 4 .;locus=RLOC_00001848
ChrX	stalkie_big_nohaplotig	exon	30889142	30890157	99	+	.	Parent=ORF1703.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30889142	30890157	.	+	0	Parent=ORF1703.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30890093	30900404	.	+	.	ID=FBgn0045495.mrna1;geneID=FBgn0045495.path1;Name=FBgn0045495;Dir=sensecoverage=100.0;identity=100.0;matches=732;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001848
ChrX	stalkie_big_nohaplotig	exon	30890093	30890113	100	+	.	Parent=FBgn0045495.mrna1;Target=FBgn0045495 1 21 +
ChrX	stalkie_big_nohaplotig	exon	30899545	30899946	100	+	.	Parent=FBgn0045495.mrna1;Target=FBgn0045495 22 423 +
ChrX	stalkie_big_nohaplotig	exon	30900029	30900187	100	+	.	Parent=FBgn0045495.mrna1;Target=FBgn0045495 424 582 +
ChrX	stalkie_big_nohaplotig	exon	30900255	30900404	100	+	.	Parent=FBgn0045495.mrna1;Target=FBgn0045495 583 732 +
ChrX	stalkie_big_nohaplotig	CDS	30890093	30890113	.	+	0	Parent=FBgn0045495.mrna1;Target=FBgn0045495 1 21 +
ChrX	stalkie_big_nohaplotig	CDS	30899545	30899946	.	+	0	Parent=FBgn0045495.mrna1;Target=FBgn0045495 22 423 +
ChrX	stalkie_big_nohaplotig	CDS	30900029	30900187	.	+	0	Parent=FBgn0045495.mrna1;Target=FBgn0045495 424 582 +
ChrX	stalkie_big_nohaplotig	CDS	30900255	30900404	.	+	0	Parent=FBgn0045495.mrna1;Target=FBgn0045495 583 732 +
ChrX	gffcl	locus	30912730	30914348	.	.	.	ID=RLOC_00001849;geneIDs=comp121919_c0_seq1.path1,comp140250_c0_seq1.path1;transcripts=comp140250_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30913484	30914348	.	+	.	ID=comp140250_c0_seq1.mrna1;geneID=comp140250_c0_seq1.path1;Name=comp140250_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=862;mismatches=2;indels=1;unknowns=0;Target=comp140250_c0_seq1 864 1 .;CDS_Target=comp140250_c0_seq1 645 571 .;locus=RLOC_00001849
ChrX	stalkie_big_nohaplotig	exon	30913484	30914348	99	+	.	Parent=comp140250_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30914055	30914129	.	+	0	Parent=comp140250_c0_seq1.mrna1
ChrX	gffcl	locus	30915683	30916477	.	-	.	ID=RLOC_00001850;geneIDs=comp150219_c0_seq1.path1;transcripts=comp150219_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30915683	30916477	.	-	.	ID=comp150219_c0_seq1.mrna1;geneID=comp150219_c0_seq1.path1;Name=comp150219_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=792;mismatches=3;indels=0;unknowns=0;Target=comp150219_c0_seq1 795 1 .;CDS_Target=comp150219_c0_seq1 160 2 .;locus=RLOC_00001850
ChrX	stalkie_big_nohaplotig	exon	30915683	30916477	99	-	.	Parent=comp150219_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30916318	30916476	.	-	0	Parent=comp150219_c0_seq1.mrna1
ChrX	gffcl	locus	30942159	30942837	.	+	.	ID=RLOC_00001852;geneIDs=comp142646_c0_seq1.path1;transcripts=comp142646_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30942159	30942837	.	+	.	ID=comp142646_c0_seq1.mrna1;geneID=comp142646_c0_seq1.path1;Name=comp142646_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=677;mismatches=2;indels=1;unknowns=0;Target=comp142646_c0_seq1 680 1 .;CDS_Target=comp142646_c0_seq1 238 119 .;locus=RLOC_00001852
ChrX	stalkie_big_nohaplotig	exon	30942159	30942837	99	+	.	Parent=comp142646_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30942277	30942396	.	+	0	Parent=comp142646_c0_seq1.mrna1
ChrX	gffcl	locus	30943830	30944094	.	+	.	ID=RLOC_00001853;geneIDs=comp135445_c0_seq1.path1;transcripts=comp135445_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30943830	30944094	.	+	.	ID=comp135445_c0_seq1.mrna1;geneID=comp135445_c0_seq1.path1;Name=comp135445_c0_seq1;Dir=indeterminatecoverage=90.6;identity=98.1;matches=265;mismatches=0;indels=5;unknowns=0;Target=comp135445_c0_seq1 298 29 .;CDS_Target=comp135445_c0_seq1 91 29 .;locus=RLOC_00001853
ChrX	stalkie_big_nohaplotig	exon	30943830	30944094	98	+	.	Parent=comp135445_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30943830	30943887	.	+	0	Parent=comp135445_c0_seq1.mrna1
ChrX	gffcl	locus	30972996	30980113	.	-	.	ID=RLOC_00001854;geneIDs=comp159934_c0_seq1.path1;transcripts=comp159934_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30972996	30980113	.	-	.	ID=comp159934_c0_seq1.mrna1;geneID=comp159934_c0_seq1.path1;Name=comp159934_c0_seq1;Dir=antisensecoverage=96.4;identity=99.6;matches=6328;mismatches=23;indels=0;unknowns=0;locus=RLOC_00001854
ChrX	stalkie_big_nohaplotig	exon	30972996	30976707	100	-	.	Parent=comp159934_c0_seq1.mrna1;Target=comp159934_c0_seq1 5 3716 -
ChrX	stalkie_big_nohaplotig	exon	30976834	30978660	100	-	.	Parent=comp159934_c0_seq1.mrna1;Target=comp159934_c0_seq1 3717 5543 -
ChrX	stalkie_big_nohaplotig	exon	30978738	30978844	100	-	.	Parent=comp159934_c0_seq1.mrna1;Target=comp159934_c0_seq1 5544 5650 -
ChrX	stalkie_big_nohaplotig	exon	30979272	30979462	100	-	.	Parent=comp159934_c0_seq1.mrna1;Target=comp159934_c0_seq1 5651 5841 -
ChrX	stalkie_big_nohaplotig	exon	30979534	30979832	99	-	.	Parent=comp159934_c0_seq1.mrna1;Target=comp159934_c0_seq1 5842 6140 -
ChrX	stalkie_big_nohaplotig	exon	30979899	30980113	89	-	.	Parent=comp159934_c0_seq1.mrna1;Target=comp159934_c0_seq1 6141 6355 -
ChrX	stalkie_big_nohaplotig	CDS	30974010	30976707	.	-	1	Parent=comp159934_c0_seq1.mrna1;Target=comp159934_c0_seq1 1019 3716 .
ChrX	stalkie_big_nohaplotig	CDS	30976834	30978218	.	-	0	Parent=comp159934_c0_seq1.mrna1;Target=comp159934_c0_seq1 3717 5101 .
ChrX	gffcl	locus	30974013	30978581	.	+	.	ID=RLOC_00001855;geneIDs=ORF18.path1;transcripts=ORF18.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30974013	30978581	.	+	.	ID=ORF18.mrna1;geneID=ORF18.path1;Name=ORF18;Dir=antisensecoverage=100.0;identity=100.0;matches=4442;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001855
ChrX	stalkie_big_nohaplotig	exon	30974013	30976693	100	+	.	Parent=ORF18.mrna1;Target=ORF18 1763 4443 -
ChrX	stalkie_big_nohaplotig	exon	30976820	30978581	99	+	.	Parent=ORF18.mrna1;Target=ORF18 1 1762 -
ChrX	stalkie_big_nohaplotig	CDS	30976594	30976693	.	+	0	Parent=ORF18.mrna1;Target=ORF18 1763 1862 .
ChrX	stalkie_big_nohaplotig	CDS	30976820	30977046	.	+	2	Parent=ORF18.mrna1;Target=ORF18 1536 1762 .
ChrX	gffcl	locus	30991832	30992934	.	+	.	ID=RLOC_00001856;geneIDs=comp142175_c1_seq1.path1;transcripts=comp142175_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	30991832	30992934	.	+	.	ID=comp142175_c1_seq1.mrna1;geneID=comp142175_c1_seq1.path1;Name=comp142175_c1_seq1;Dir=indeterminatecoverage=99.9;identity=99.2;matches=1094;mismatches=3;indels=6;unknowns=0;Target=comp142175_c1_seq1 1097 1 .;CDS_Target=comp142175_c1_seq1 912 787 .;locus=RLOC_00001856
ChrX	stalkie_big_nohaplotig	exon	30991832	30992934	99	+	.	Parent=comp142175_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	30992624	30992749	.	+	0	Parent=comp142175_c1_seq1.mrna1
ChrX	gffcl	locus	31224590	32605640	.	-	.	ID=RLOC_00001857;geneIDs=comp135328_c0_seq1.path1;transcripts=comp135328_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31224590	32605640	.	-	.	ID=comp135328_c0_seq1.mrna1;geneID=comp135328_c0_seq1.path1;Name=comp135328_c0_seq1;Dir=sensecoverage=87.5;identity=98.7;matches=366;mismatches=5;indels=0;unknowns=0;Target=comp135328_c0_seq1 1 90 +;locus=RLOC_00001857
ChrX	stalkie_big_nohaplotig	exon	31224590	31224595	100	-	.	Parent=comp135328_c0_seq1.mrna1;Target=comp135328_c0_seq1 366 371 +
ChrX	stalkie_big_nohaplotig	exon	32597556	32597656	100	-	.	Parent=comp135328_c0_seq1.mrna1;Target=comp135328_c0_seq1 265 365 +
ChrX	stalkie_big_nohaplotig	exon	32605377	32605640	98	-	.	Parent=comp135328_c0_seq1.mrna1;Target=comp135328_c0_seq1 1 264 +
ChrX	stalkie_big_nohaplotig	CDS	32605551	32605640	.	-	0	Parent=comp135328_c0_seq1.mrna1
ChrX	gffcl	locus	31284258	31287941	.	+	.	ID=RLOC_00001858;geneIDs=ORF40.path1;transcripts=ORF40.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31284258	31287941	.	+	.	ID=ORF40.mrna1;geneID=ORF40.path1;Name=ORF40;Dir=indeterminatecoverage=100.0;identity=100.0;matches=3684;mismatches=0;indels=0;unknowns=0;Target=ORF40 3684 1 .;locus=RLOC_00001858
ChrX	stalkie_big_nohaplotig	exon	31284258	31287941	100	+	.	Parent=ORF40.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31284258	31287941	.	+	0	Parent=ORF40.mrna1
ChrX	gffcl	locus	31318292	31319122	.	+	.	ID=RLOC_00001859;geneIDs=ORF2629.path1;transcripts=ORF2629.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31318292	31319122	.	+	.	ID=ORF2629.mrna1;geneID=ORF2629.path1;Name=ORF2629;Dir=indeterminatecoverage=100.0;identity=100.0;matches=831;mismatches=0;indels=0;unknowns=0;Target=ORF2629 831 1 .;locus=RLOC_00001859
ChrX	stalkie_big_nohaplotig	exon	31318292	31319122	100	+	.	Parent=ORF2629.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31318292	31319122	.	+	0	Parent=ORF2629.mrna1
ChrX	gffcl	locus	31321499	31323004	.	-	.	ID=RLOC_00001860;geneIDs=ORF706.path1;transcripts=ORF706.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31321499	31323004	.	-	.	ID=ORF706.mrna1;geneID=ORF706.path1;Name=ORF706;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1506;mismatches=0;indels=0;unknowns=0;Target=ORF706 1506 1 .;locus=RLOC_00001860
ChrX	stalkie_big_nohaplotig	exon	31321499	31323004	100	-	.	Parent=ORF706.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31321499	31323004	.	-	0	Parent=ORF706.mrna1
ChrX	gffcl	locus	31369755	31384316	.	-	.	ID=RLOC_00001861;geneIDs=comp142759_c0_seq1.path1;transcripts=comp142759_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31369755	31384316	.	-	.	ID=comp142759_c0_seq1.mrna1;geneID=comp142759_c0_seq1.path1;Name=comp142759_c0_seq1;Dir=sensecoverage=95.2;identity=99.7;matches=698;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001861
ChrX	stalkie_big_nohaplotig	exon	31369755	31369756	100	-	.	Parent=comp142759_c0_seq1.mrna1;Target=comp142759_c0_seq1 699 700 +
ChrX	stalkie_big_nohaplotig	exon	31383392	31383562	100	-	.	Parent=comp142759_c0_seq1.mrna1;Target=comp142759_c0_seq1 528 698 +
ChrX	stalkie_big_nohaplotig	exon	31383624	31383923	100	-	.	Parent=comp142759_c0_seq1.mrna1;Target=comp142759_c0_seq1 228 527 +
ChrX	stalkie_big_nohaplotig	exon	31384090	31384316	99	-	.	Parent=comp142759_c0_seq1.mrna1;Target=comp142759_c0_seq1 1 227 +
ChrX	stalkie_big_nohaplotig	CDS	31383513	31383562	.	-	2	Parent=comp142759_c0_seq1.mrna1;Target=comp142759_c0_seq1 528 577 +
ChrX	stalkie_big_nohaplotig	CDS	31383624	31383915	.	-	0	Parent=comp142759_c0_seq1.mrna1;Target=comp142759_c0_seq1 236 527 +
ChrX	gffcl	locus	31388798	31391454	.	-	.	ID=RLOC_00001862;geneIDs=FBgn0032431.2.path1;transcripts=FBgn0032431.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31388798	31391454	.	-	.	ID=FBgn0032431.2.mrna1;geneID=FBgn0032431.2.path1;Name=FBgn0032431.2;Dir=sensecoverage=100.0;identity=100.0;matches=546;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001862
ChrX	stalkie_big_nohaplotig	exon	31388798	31388919	100	-	.	Parent=FBgn0032431.2.mrna1;Target=FBgn0032431.2 425 546 +
ChrX	stalkie_big_nohaplotig	exon	31391031	31391454	100	-	.	Parent=FBgn0032431.2.mrna1;Target=FBgn0032431.2 1 424 +
ChrX	stalkie_big_nohaplotig	CDS	31388798	31388919	.	-	2	Parent=FBgn0032431.2.mrna1;Target=FBgn0032431.2 425 546 +
ChrX	stalkie_big_nohaplotig	CDS	31391031	31391454	.	-	0	Parent=FBgn0032431.2.mrna1;Target=FBgn0032431.2 1 424 +
ChrX	gffcl	locus	31413589	31413968	.	+	.	ID=RLOC_00001863;geneIDs=comp607020_c0_seq1.path1;transcripts=comp607020_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31413589	31413968	.	+	.	ID=comp607020_c0_seq1.mrna1;geneID=comp607020_c0_seq1.path1;Name=comp607020_c0_seq1;Dir=indeterminatecoverage=94.3;identity=100.0;matches=380;mismatches=0;indels=0;unknowns=0;Target=comp607020_c0_seq1 380 1 .;CDS_Target=comp607020_c0_seq1 353 3 .;locus=RLOC_00001863
ChrX	stalkie_big_nohaplotig	exon	31413589	31413968	100	+	.	Parent=comp607020_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31413591	31413941	.	+	0	Parent=comp607020_c0_seq1.mrna1
ChrX	gffcl	locus	31432221	31455503	.	+	.	ID=RLOC_00001864;geneIDs=FBgn0032587.1.path1;transcripts=FBgn0032587.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31432221	31455503	.	+	.	ID=FBgn0032587.1.mrna1;geneID=FBgn0032587.1.path1;Name=FBgn0032587.1;Dir=sensecoverage=100.0;identity=100.0;matches=1824;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001864
ChrX	stalkie_big_nohaplotig	exon	31432221	31432814	100	+	.	Parent=FBgn0032587.1.mrna1;Target=FBgn0032587.1 1 594 +
ChrX	stalkie_big_nohaplotig	exon	31454274	31455503	100	+	.	Parent=FBgn0032587.1.mrna1;Target=FBgn0032587.1 595 1824 +
ChrX	stalkie_big_nohaplotig	CDS	31432221	31432814	.	+	0	Parent=FBgn0032587.1.mrna1;Target=FBgn0032587.1 1 594 +
ChrX	stalkie_big_nohaplotig	CDS	31454274	31455503	.	+	0	Parent=FBgn0032587.1.mrna1;Target=FBgn0032587.1 595 1824 +
ChrX	gffcl	locus	31456381	31457240	.	+	.	ID=RLOC_00001865;geneIDs=comp160302_c0_seq1.path1;transcripts=comp160302_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31456381	31457240	.	+	.	ID=comp160302_c0_seq1.mrna1;geneID=comp160302_c0_seq1.path1;Name=comp160302_c0_seq1;Dir=indeterminatecoverage=62.8;identity=95.7;matches=850;mismatches=10;indels=28;unknowns=0;Target=comp160302_c0_seq1 888 1 .;CDS_Target=comp160302_c0_seq1 113 3 .;locus=RLOC_00001865
ChrX	stalkie_big_nohaplotig	exon	31456381	31457240	95	+	.	Parent=comp160302_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31456383	31456493	.	+	0	Parent=comp160302_c0_seq1.mrna1
ChrX	gffcl	locus	31458218	31458902	.	+	.	ID=RLOC_00001866;geneIDs=comp147195_c0_seq1.path1;transcripts=comp147195_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31458218	31458902	.	+	.	ID=comp147195_c0_seq1.mrna1;geneID=comp147195_c0_seq1.path1;Name=comp147195_c0_seq1;Dir=indeterminatecoverage=96.3;identity=99.9;matches=685;mismatches=0;indels=1;unknowns=0;Target=comp147195_c0_seq1 694 9 .;CDS_Target=comp147195_c0_seq1 366 241 .;locus=RLOC_00001866
ChrX	stalkie_big_nohaplotig	exon	31458218	31458902	99	+	.	Parent=comp147195_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31458450	31458574	.	+	0	Parent=comp147195_c0_seq1.mrna1
ChrX	gffcl	locus	31463485	31463952	.	+	.	ID=RLOC_00001867;geneIDs=comp150516_c0_seq1.path1;transcripts=comp150516_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31463485	31463952	.	+	.	ID=comp150516_c0_seq1.mrna1;geneID=comp150516_c0_seq1.path1;Name=comp150516_c0_seq1;Dir=indeterminatecoverage=95.3;identity=97.4;matches=456;mismatches=9;indels=3;unknowns=0;Target=comp150516_c0_seq1 488 24 .;CDS_Target=comp150516_c0_seq1 116 24 .;locus=RLOC_00001867
ChrX	stalkie_big_nohaplotig	exon	31463485	31463952	97	+	.	Parent=comp150516_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31463485	31463580	.	+	0	Parent=comp150516_c0_seq1.mrna1
ChrX	gffcl	locus	31465151	31512893	.	-	.	ID=RLOC_00001868;geneIDs=FBgn0032586.2.path1;transcripts=FBgn0032586.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31465151	31512893	.	-	.	ID=FBgn0032586.2.mrna1;geneID=FBgn0032586.2.path1;Name=FBgn0032586.2;Dir=sensecoverage=100.0;identity=100.0;matches=1497;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001868
ChrX	stalkie_big_nohaplotig	exon	31465151	31465239	100	-	.	Parent=FBgn0032586.2.mrna1;Target=FBgn0032586.2 1409 1497 +
ChrX	stalkie_big_nohaplotig	exon	31466495	31467339	100	-	.	Parent=FBgn0032586.2.mrna1;Target=FBgn0032586.2 564 1408 +
ChrX	stalkie_big_nohaplotig	exon	31467408	31467860	100	-	.	Parent=FBgn0032586.2.mrna1;Target=FBgn0032586.2 111 563 +
ChrX	stalkie_big_nohaplotig	exon	31512784	31512893	100	-	.	Parent=FBgn0032586.2.mrna1;Target=FBgn0032586.2 1 110 +
ChrX	stalkie_big_nohaplotig	CDS	31465151	31465239	.	-	2	Parent=FBgn0032586.2.mrna1;Target=FBgn0032586.2 1409 1497 +
ChrX	stalkie_big_nohaplotig	CDS	31466495	31467339	.	-	1	Parent=FBgn0032586.2.mrna1;Target=FBgn0032586.2 564 1408 +
ChrX	stalkie_big_nohaplotig	CDS	31467408	31467860	.	-	1	Parent=FBgn0032586.2.mrna1;Target=FBgn0032586.2 111 563 +
ChrX	stalkie_big_nohaplotig	CDS	31512784	31512893	.	-	0	Parent=FBgn0032586.2.mrna1;Target=FBgn0032586.2 1 110 +
ChrX	gffcl	locus	31485761	31486325	.	+	.	ID=RLOC_00001869;geneIDs=comp141281_c0_seq1.path1;transcripts=comp141281_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31485761	31486325	.	+	.	ID=comp141281_c0_seq1.mrna1;geneID=comp141281_c0_seq1.path1;Name=comp141281_c0_seq1;Dir=indeterminatecoverage=95.9;identity=100.0;matches=565;mismatches=0;indels=0;unknowns=0;Target=comp141281_c0_seq1 589 25 .;CDS_Target=comp141281_c0_seq1 587 477 .;locus=RLOC_00001869
ChrX	stalkie_big_nohaplotig	exon	31485761	31486325	100	+	.	Parent=comp141281_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31486213	31486323	.	+	0	Parent=comp141281_c0_seq1.mrna1
ChrX	gffcl	locus	31499039	31499801	.	-	.	ID=RLOC_00001870;geneIDs=comp147447_c0_seq1.path1;transcripts=comp147447_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31499039	31499801	.	-	.	ID=comp147447_c0_seq1.mrna1;geneID=comp147447_c0_seq1.path1;Name=comp147447_c0_seq1;Dir=sensecoverage=99.0;identity=99.7;matches=701;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001870
ChrX	stalkie_big_nohaplotig	exon	31499039	31499579	99	-	.	Parent=comp147447_c0_seq1.mrna1;Target=comp147447_c0_seq1 164 704 +
ChrX	stalkie_big_nohaplotig	exon	31499640	31499801	100	-	.	Parent=comp147447_c0_seq1.mrna1;Target=comp147447_c0_seq1 2 163 +
ChrX	stalkie_big_nohaplotig	CDS	31499358	31499579	.	-	0	Parent=comp147447_c0_seq1.mrna1;Target=comp147447_c0_seq1 164 385 +
ChrX	stalkie_big_nohaplotig	CDS	31499640	31499663	.	-	0	Parent=comp147447_c0_seq1.mrna1;Target=comp147447_c0_seq1 140 163 +
ChrX	gffcl	locus	31583873	32439561	.	+	.	ID=RLOC_00001871;geneIDs=comp146429_c0_seq1.path1;transcripts=comp146429_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31583873	32439561	.	+	.	ID=comp146429_c0_seq1.mrna1;geneID=comp146429_c0_seq1.path1;Name=comp146429_c0_seq1;Dir=antisensecoverage=87.2;identity=100.0;matches=662;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001871
ChrX	stalkie_big_nohaplotig	exon	31583873	31583874	100	+	.	Parent=comp146429_c0_seq1.mrna1;Target=comp146429_c0_seq1 661 662 -
ChrX	stalkie_big_nohaplotig	exon	32436554	32436698	100	+	.	Parent=comp146429_c0_seq1.mrna1;Target=comp146429_c0_seq1 516 660 -
ChrX	stalkie_big_nohaplotig	exon	32436774	32436950	100	+	.	Parent=comp146429_c0_seq1.mrna1;Target=comp146429_c0_seq1 339 515 -
ChrX	stalkie_big_nohaplotig	exon	32439224	32439561	100	+	.	Parent=comp146429_c0_seq1.mrna1;Target=comp146429_c0_seq1 1 338 -
ChrX	stalkie_big_nohaplotig	CDS	32436650	32436698	.	+	0	Parent=comp146429_c0_seq1.mrna1;Target=comp146429_c0_seq1 516 564 .
ChrX	stalkie_big_nohaplotig	CDS	32436774	32436950	.	+	2	Parent=comp146429_c0_seq1.mrna1;Target=comp146429_c0_seq1 339 515 .
ChrX	stalkie_big_nohaplotig	CDS	32439224	32439447	.	+	2	Parent=comp146429_c0_seq1.mrna1;Target=comp146429_c0_seq1 115 338 .
ChrX	gffcl	locus	31625199	31625977	.	+	.	ID=RLOC_00001873;geneIDs=comp154851_c1_seq1.path1;transcripts=comp154851_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31625199	31625977	.	+	.	ID=comp154851_c1_seq1.mrna1;geneID=comp154851_c1_seq1.path1;Name=comp154851_c1_seq1;Dir=indeterminatecoverage=98.9;identity=98.0;matches=773;mismatches=6;indels=10;unknowns=0;Target=comp154851_c1_seq1 793 5 .;CDS_Target=comp154851_c1_seq1 627 520 .;locus=RLOC_00001873
ChrX	stalkie_big_nohaplotig	exon	31625199	31625977	97	+	.	Parent=comp154851_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31625714	31625815	.	+	0	Parent=comp154851_c1_seq1.mrna1
ChrX	gffcl	locus	31626671	31628210	.	+	.	ID=RLOC_00001874;geneIDs=comp160869_c0_seq1.path1;transcripts=comp160869_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31626671	31628210	.	+	.	ID=comp160869_c0_seq1.mrna1;geneID=comp160869_c0_seq1.path1;Name=comp160869_c0_seq1;Dir=indeterminatecoverage=98.8;identity=98.7;matches=1524;mismatches=14;indels=6;unknowns=0;Target=comp160869_c0_seq1 1560 19 .;CDS_Target=comp160869_c0_seq1 1225 1181 .;locus=RLOC_00001874
ChrX	stalkie_big_nohaplotig	exon	31626671	31628210	98	+	.	Parent=comp160869_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31627831	31627873	.	+	0	Parent=comp160869_c0_seq1.mrna1
ChrX	gffcl	locus	31641379	31643567	.	+	.	ID=RLOC_00001876;geneIDs=ORF404.path1;transcripts=ORF404.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31641379	31643567	.	+	.	ID=ORF404.mrna1;geneID=ORF404.path1;Name=ORF404;Dir=sensecoverage=99.0;identity=99.5;matches=1861;mismatches=10;indels=0;unknowns=0;locus=RLOC_00001876
ChrX	stalkie_big_nohaplotig	exon	31641379	31641898	99	+	.	Parent=ORF404.mrna1;Target=ORF404 20 539 +
ChrX	stalkie_big_nohaplotig	exon	31641956	31642196	99	+	.	Parent=ORF404.mrna1;Target=ORF404 540 780 +
ChrX	stalkie_big_nohaplotig	exon	31642272	31642686	98	+	.	Parent=ORF404.mrna1;Target=ORF404 781 1195 +
ChrX	stalkie_big_nohaplotig	exon	31642873	31643567	100	+	.	Parent=ORF404.mrna1;Target=ORF404 1196 1890 +
ChrX	stalkie_big_nohaplotig	CDS	31641381	31641898	.	+	0	Parent=ORF404.mrna1;Target=ORF404 22 539 +
ChrX	stalkie_big_nohaplotig	CDS	31641956	31642196	.	+	1	Parent=ORF404.mrna1;Target=ORF404 540 780 +
ChrX	stalkie_big_nohaplotig	CDS	31642272	31642686	.	+	0	Parent=ORF404.mrna1;Target=ORF404 781 1195 +
ChrX	stalkie_big_nohaplotig	CDS	31642873	31643567	.	+	2	Parent=ORF404.mrna1;Target=ORF404 1196 1890 +
ChrX	gffcl	locus	31649752	31650076	.	-	.	ID=RLOC_00001877;geneIDs=comp149661_c0_seq1.path1;transcripts=comp149661_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31649752	31650076	.	-	.	ID=comp149661_c0_seq1.mrna1;geneID=comp149661_c0_seq1.path1;Name=comp149661_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=325;mismatches=0;indels=0;unknowns=0;Target=comp149661_c0_seq1 325 1 .;CDS_Target=comp149661_c0_seq1 209 162 .;locus=RLOC_00001877
ChrX	stalkie_big_nohaplotig	exon	31649752	31650076	100	-	.	Parent=comp149661_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31649868	31649915	.	-	0	Parent=comp149661_c0_seq1.mrna1
ChrX	gffcl	locus	31654981	31655274	.	+	.	ID=RLOC_00001878;geneIDs=comp135276_c0_seq1.path1;transcripts=comp135276_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31654981	31655274	.	+	.	ID=comp135276_c0_seq1.mrna1;geneID=comp135276_c0_seq1.path1;Name=comp135276_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=293;mismatches=1;indels=0;unknowns=0;Target=comp135276_c0_seq1 294 1 .;CDS_Target=comp135276_c0_seq1 94 2 .;locus=RLOC_00001878
ChrX	stalkie_big_nohaplotig	exon	31654981	31655274	99	+	.	Parent=comp135276_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31654982	31655074	.	+	0	Parent=comp135276_c0_seq1.mrna1
ChrX	gffcl	locus	31660789	31665595	.	+	.	ID=RLOC_00001879;geneIDs=FBgn0032726.1.path1;transcripts=FBgn0032726.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31660789	31665595	.	+	.	ID=FBgn0032726.1.mrna1;geneID=FBgn0032726.1.path1;Name=FBgn0032726.1;Dir=sensecoverage=100.0;identity=99.9;matches=1040;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001879
ChrX	stalkie_big_nohaplotig	exon	31660789	31660993	100	+	.	Parent=FBgn0032726.1.mrna1;Target=FBgn0032726.1 1 205 +
ChrX	stalkie_big_nohaplotig	exon	31664572	31664751	100	+	.	Parent=FBgn0032726.1.mrna1;Target=FBgn0032726.1 206 385 +
ChrX	stalkie_big_nohaplotig	exon	31664819	31665081	100	+	.	Parent=FBgn0032726.1.mrna1;Target=FBgn0032726.1 386 648 +
ChrX	stalkie_big_nohaplotig	exon	31665136	31665261	100	+	.	Parent=FBgn0032726.1.mrna1;Target=FBgn0032726.1 649 774 +
ChrX	stalkie_big_nohaplotig	exon	31665329	31665595	99	+	.	Parent=FBgn0032726.1.mrna1;Target=FBgn0032726.1 775 1041 +
ChrX	stalkie_big_nohaplotig	CDS	31660789	31660993	.	+	0	Parent=FBgn0032726.1.mrna1;Target=FBgn0032726.1 1 205 +
ChrX	stalkie_big_nohaplotig	CDS	31664572	31664751	.	+	2	Parent=FBgn0032726.1.mrna1;Target=FBgn0032726.1 206 385 +
ChrX	stalkie_big_nohaplotig	CDS	31664819	31665081	.	+	2	Parent=FBgn0032726.1.mrna1;Target=FBgn0032726.1 386 648 +
ChrX	stalkie_big_nohaplotig	CDS	31665136	31665261	.	+	0	Parent=FBgn0032726.1.mrna1;Target=FBgn0032726.1 649 774 +
ChrX	stalkie_big_nohaplotig	CDS	31665329	31665595	.	+	0	Parent=FBgn0032726.1.mrna1;Target=FBgn0032726.1 775 1041 +
ChrX	gffcl	locus	31667427	31670777	.	+	.	ID=RLOC_00001880;geneIDs=comp146359_c0_seq1.path1;transcripts=comp146359_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31667427	31670777	.	+	.	ID=comp146359_c0_seq1.mrna1;geneID=comp146359_c0_seq1.path1;Name=comp146359_c0_seq1;Dir=antisensecoverage=97.4;identity=99.9;matches=1514;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001880
ChrX	stalkie_big_nohaplotig	exon	31667427	31667710	100	+	.	Parent=comp146359_c0_seq1.mrna1;Target=comp146359_c0_seq1 1233 1516 -
ChrX	stalkie_big_nohaplotig	exon	31668567	31668625	100	+	.	Parent=comp146359_c0_seq1.mrna1;Target=comp146359_c0_seq1 1174 1232 -
ChrX	stalkie_big_nohaplotig	exon	31668803	31668933	100	+	.	Parent=comp146359_c0_seq1.mrna1;Target=comp146359_c0_seq1 1043 1173 -
ChrX	stalkie_big_nohaplotig	exon	31669001	31669348	100	+	.	Parent=comp146359_c0_seq1.mrna1;Target=comp146359_c0_seq1 695 1042 -
ChrX	stalkie_big_nohaplotig	exon	31670013	31670101	100	+	.	Parent=comp146359_c0_seq1.mrna1;Target=comp146359_c0_seq1 606 694 -
ChrX	stalkie_big_nohaplotig	exon	31670173	31670777	99	+	.	Parent=comp146359_c0_seq1.mrna1;Target=comp146359_c0_seq1 1 605 -
ChrX	stalkie_big_nohaplotig	CDS	31668608	31668625	.	+	0	Parent=comp146359_c0_seq1.mrna1;Target=comp146359_c0_seq1 1174 1191 .
ChrX	stalkie_big_nohaplotig	CDS	31668803	31668933	.	+	0	Parent=comp146359_c0_seq1.mrna1;Target=comp146359_c0_seq1 1043 1173 .
ChrX	stalkie_big_nohaplotig	CDS	31669001	31669103	.	+	1	Parent=comp146359_c0_seq1.mrna1;Target=comp146359_c0_seq1 940 1042 .
ChrX	gffcl	locus	31670947	31671685	.	-	.	ID=RLOC_00001881;geneIDs=comp155786_c0_seq1.path1;transcripts=comp155786_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31670947	31671685	.	-	.	ID=comp155786_c0_seq1.mrna1;geneID=comp155786_c0_seq1.path1;Name=comp155786_c0_seq1;Dir=indeterminatecoverage=98.0;identity=99.7;matches=737;mismatches=2;indels=0;unknowns=0;Target=comp155786_c0_seq1 739 1 .;CDS_Target=comp155786_c0_seq1 474 382 .;locus=RLOC_00001881
ChrX	stalkie_big_nohaplotig	exon	31670947	31671685	99	-	.	Parent=comp155786_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31671212	31671304	.	-	0	Parent=comp155786_c0_seq1.mrna1
ChrX	gffcl	locus	31673381	31673926	.	+	.	ID=RLOC_00001882;geneIDs=FBgn0032725.1.path1;transcripts=FBgn0032725.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31673381	31673926	.	+	.	ID=FBgn0032725.1.mrna1;geneID=FBgn0032725.1.path1;Name=FBgn0032725.1;Dir=sensecoverage=100.0;identity=100.0;matches=261;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001882
ChrX	stalkie_big_nohaplotig	exon	31673381	31673413	100	+	.	Parent=FBgn0032725.1.mrna1;Target=FBgn0032725.1 1 33 +
ChrX	stalkie_big_nohaplotig	exon	31673625	31673755	100	+	.	Parent=FBgn0032725.1.mrna1;Target=FBgn0032725.1 34 164 +
ChrX	stalkie_big_nohaplotig	exon	31673830	31673926	100	+	.	Parent=FBgn0032725.1.mrna1;Target=FBgn0032725.1 165 261 +
ChrX	stalkie_big_nohaplotig	CDS	31673381	31673413	.	+	0	Parent=FBgn0032725.1.mrna1;Target=FBgn0032725.1 1 33 +
ChrX	stalkie_big_nohaplotig	CDS	31673625	31673755	.	+	0	Parent=FBgn0032725.1.mrna1;Target=FBgn0032725.1 34 164 +
ChrX	stalkie_big_nohaplotig	CDS	31673830	31673926	.	+	1	Parent=FBgn0032725.1.mrna1;Target=FBgn0032725.1 165 261 +
ChrX	gffcl	locus	31676177	31678002	.	-	.	ID=RLOC_00001883;geneIDs=FBgn0032724.1.path1;transcripts=FBgn0032724.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31676177	31678002	.	-	.	ID=FBgn0032724.1.mrna1;geneID=FBgn0032724.1.path1;Name=FBgn0032724.1;Dir=sensecoverage=100.0;identity=100.0;matches=1770;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001883
ChrX	stalkie_big_nohaplotig	exon	31676177	31677145	100	-	.	Parent=FBgn0032724.1.mrna1;Target=FBgn0032724.1 802 1770 +
ChrX	stalkie_big_nohaplotig	exon	31677202	31678002	100	-	.	Parent=FBgn0032724.1.mrna1;Target=FBgn0032724.1 1 801 +
ChrX	stalkie_big_nohaplotig	CDS	31676177	31677145	.	-	0	Parent=FBgn0032724.1.mrna1;Target=FBgn0032724.1 802 1770 +
ChrX	stalkie_big_nohaplotig	CDS	31677202	31678002	.	-	0	Parent=FBgn0032724.1.mrna1;Target=FBgn0032724.1 1 801 +
ChrX	gffcl	locus	31698586	31710494	.	+	.	ID=RLOC_00001884;geneIDs=FBgn0086909.1.path1;transcripts=FBgn0086909.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31698586	31710494	.	+	.	ID=FBgn0086909.1.mrna1;geneID=FBgn0086909.1.path1;Name=FBgn0086909.1;Dir=sensecoverage=100.0;identity=100.0;matches=1275;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001884
ChrX	stalkie_big_nohaplotig	exon	31698586	31698917	100	+	.	Parent=FBgn0086909.1.mrna1;Target=FBgn0086909.1 1 332 +
ChrX	stalkie_big_nohaplotig	exon	31708445	31708569	100	+	.	Parent=FBgn0086909.1.mrna1;Target=FBgn0086909.1 333 457 +
ChrX	stalkie_big_nohaplotig	exon	31708654	31708853	100	+	.	Parent=FBgn0086909.1.mrna1;Target=FBgn0086909.1 458 657 +
ChrX	stalkie_big_nohaplotig	exon	31709877	31710494	100	+	.	Parent=FBgn0086909.1.mrna1;Target=FBgn0086909.1 658 1275 +
ChrX	stalkie_big_nohaplotig	CDS	31698586	31698917	.	+	0	Parent=FBgn0086909.1.mrna1;Target=FBgn0086909.1 1 332 +
ChrX	stalkie_big_nohaplotig	CDS	31708445	31708569	.	+	1	Parent=FBgn0086909.1.mrna1;Target=FBgn0086909.1 333 457 +
ChrX	stalkie_big_nohaplotig	CDS	31708654	31708853	.	+	2	Parent=FBgn0086909.1.mrna1;Target=FBgn0086909.1 458 657 +
ChrX	stalkie_big_nohaplotig	CDS	31709877	31710494	.	+	0	Parent=FBgn0086909.1.mrna1;Target=FBgn0086909.1 658 1275 +
ChrX	gffcl	locus	31716330	31717524	.	-	.	ID=RLOC_00001885;geneIDs=comp156143_c0_seq1.path1;transcripts=comp156143_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31716330	31717524	.	-	.	ID=comp156143_c0_seq1.mrna1;geneID=comp156143_c0_seq1.path1;Name=comp156143_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.8;matches=1193;mismatches=2;indels=0;unknowns=0;Target=comp156143_c0_seq1 1214 20 .;CDS_Target=comp156143_c0_seq1 473 354 .;locus=RLOC_00001885
ChrX	stalkie_big_nohaplotig	exon	31716330	31717524	99	-	.	Parent=comp156143_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31717071	31717190	.	-	0	Parent=comp156143_c0_seq1.mrna1
ChrX	gffcl	locus	31720193	31721031	.	-	.	ID=RLOC_00001886;geneIDs=FBgn0005617.path1;transcripts=FBgn0005617.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31720193	31721031	.	-	.	ID=FBgn0005617.mrna1;geneID=FBgn0005617.path1;Name=FBgn0005617;Dir=indeterminatecoverage=100.0;identity=99.9;matches=839;mismatches=0;indels=1;unknowns=0;Target=FBgn0005617 840 1 .;CDS_Target=FBgn0005617 113 3 .;locus=RLOC_00001886
ChrX	stalkie_big_nohaplotig	exon	31720193	31721031	99	-	.	Parent=FBgn0005617.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31720920	31721029	.	-	0	Parent=FBgn0005617.mrna1
ChrX	gffcl	locus	31726091	31726930	.	+	.	ID=RLOC_00001887;geneIDs=comp151092_c0_seq1.path1;transcripts=comp151092_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31726091	31726930	.	+	.	ID=comp151092_c0_seq1.mrna1;geneID=comp151092_c0_seq1.path1;Name=comp151092_c0_seq1;Dir=sensecoverage=99.3;identity=99.7;matches=666;mismatches=2;indels=0;unknowns=0;Target=comp151092_c0_seq1 342 563 +;locus=RLOC_00001887
ChrX	stalkie_big_nohaplotig	exon	31726091	31726385	99	+	.	Parent=comp151092_c0_seq1.mrna1;Target=comp151092_c0_seq1 4 298 +
ChrX	stalkie_big_nohaplotig	exon	31726453	31726760	100	+	.	Parent=comp151092_c0_seq1.mrna1;Target=comp151092_c0_seq1 299 606 +
ChrX	stalkie_big_nohaplotig	exon	31726866	31726930	100	+	.	Parent=comp151092_c0_seq1.mrna1;Target=comp151092_c0_seq1 607 671 +
ChrX	stalkie_big_nohaplotig	CDS	31726496	31726717	.	+	0	Parent=comp151092_c0_seq1.mrna1
ChrX	gffcl	locus	31729413	31732333	.	+	.	ID=RLOC_00001888;geneIDs=FBgn0032246.1.path1;transcripts=FBgn0032246.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31729413	31732333	.	+	.	ID=FBgn0032246.1.mrna1;geneID=FBgn0032246.1.path1;Name=FBgn0032246.1;Dir=sensecoverage=100.0;identity=99.9;matches=1388;mismatches=0;indels=1;unknowns=0;Target=FBgn0032246.1 165 263 +;locus=RLOC_00001888
ChrX	stalkie_big_nohaplotig	exon	31729413	31729737	99	+	.	Parent=FBgn0032246.1.mrna1;Target=FBgn0032246.1 1 326 +
ChrX	stalkie_big_nohaplotig	exon	31729827	31730174	100	+	.	Parent=FBgn0032246.1.mrna1;Target=FBgn0032246.1 327 674 +
ChrX	stalkie_big_nohaplotig	exon	31730246	31730358	100	+	.	Parent=FBgn0032246.1.mrna1;Target=FBgn0032246.1 675 787 +
ChrX	stalkie_big_nohaplotig	exon	31730418	31730544	100	+	.	Parent=FBgn0032246.1.mrna1;Target=FBgn0032246.1 788 914 +
ChrX	stalkie_big_nohaplotig	exon	31730600	31730796	100	+	.	Parent=FBgn0032246.1.mrna1;Target=FBgn0032246.1 915 1111 +
ChrX	stalkie_big_nohaplotig	exon	31731981	31732122	100	+	.	Parent=FBgn0032246.1.mrna1;Target=FBgn0032246.1 1112 1253 +
ChrX	stalkie_big_nohaplotig	exon	31732198	31732333	100	+	.	Parent=FBgn0032246.1.mrna1;Target=FBgn0032246.1 1254 1389 +
ChrX	stalkie_big_nohaplotig	CDS	31729577	31729674	.	+	0	Parent=FBgn0032246.1.mrna1
ChrX	gffcl	locus	31736926	31737607	.	+	.	ID=RLOC_00001889;geneIDs=FBgn0262601.3.path1;transcripts=FBgn0262601.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31736926	31737607	.	+	.	ID=FBgn0262601.3.mrna1;geneID=FBgn0262601.3.path1;Name=FBgn0262601.3;Dir=sensecoverage=100.0;identity=100.0;matches=579;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001889
ChrX	stalkie_big_nohaplotig	exon	31736926	31736955	100	+	.	Parent=FBgn0262601.3.mrna1;Target=FBgn0262601.3 1 30 +
ChrX	stalkie_big_nohaplotig	exon	31737059	31737607	100	+	.	Parent=FBgn0262601.3.mrna1;Target=FBgn0262601.3 31 579 +
ChrX	stalkie_big_nohaplotig	CDS	31736926	31736955	.	+	0	Parent=FBgn0262601.3.mrna1;Target=FBgn0262601.3 1 30 +
ChrX	stalkie_big_nohaplotig	CDS	31737059	31737607	.	+	0	Parent=FBgn0262601.3.mrna1;Target=FBgn0262601.3 31 579 +
ChrX	gffcl	locus	31741050	31741718	.	+	.	ID=RLOC_00001890;geneIDs=FBgn0022268.1.path1;transcripts=FBgn0022268.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31741050	31741718	.	+	.	ID=FBgn0022268.1.mrna1;geneID=FBgn0022268.1.path1;Name=FBgn0022268.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=669;mismatches=0;indels=0;unknowns=0;Target=FBgn0022268.1 669 1 .;locus=RLOC_00001890
ChrX	stalkie_big_nohaplotig	exon	31741050	31741718	100	+	.	Parent=FBgn0022268.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31741050	31741718	.	+	0	Parent=FBgn0022268.1.mrna1
ChrX	gffcl	locus	31749949	31751105	.	-	.	ID=RLOC_00001891;geneIDs=FBgn0032250.1.path1;transcripts=FBgn0032250.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31749949	31751105	.	-	.	ID=FBgn0032250.1.mrna1;geneID=FBgn0032250.1.path1;Name=FBgn0032250.1;Dir=sensecoverage=100.0;identity=100.0;matches=990;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001891
ChrX	stalkie_big_nohaplotig	exon	31749949	31750602	100	-	.	Parent=FBgn0032250.1.mrna1;Target=FBgn0032250.1 337 990 +
ChrX	stalkie_big_nohaplotig	exon	31750710	31750896	100	-	.	Parent=FBgn0032250.1.mrna1;Target=FBgn0032250.1 150 336 +
ChrX	stalkie_big_nohaplotig	exon	31750957	31751105	100	-	.	Parent=FBgn0032250.1.mrna1;Target=FBgn0032250.1 1 149 +
ChrX	stalkie_big_nohaplotig	CDS	31749949	31750602	.	-	0	Parent=FBgn0032250.1.mrna1;Target=FBgn0032250.1 337 990 +
ChrX	stalkie_big_nohaplotig	CDS	31750710	31750896	.	-	1	Parent=FBgn0032250.1.mrna1;Target=FBgn0032250.1 150 336 +
ChrX	stalkie_big_nohaplotig	CDS	31750957	31751105	.	-	0	Parent=FBgn0032250.1.mrna1;Target=FBgn0032250.1 1 149 +
ChrX	gffcl	locus	31752537	31756073	.	+	.	ID=RLOC_00001892;geneIDs=FBgn0031675.1.path1;transcripts=FBgn0031675.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31752537	31756073	.	+	.	ID=FBgn0031675.1.mrna1;geneID=FBgn0031675.1.path1;Name=FBgn0031675.1;Dir=sensecoverage=100.0;identity=100.0;matches=1752;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001892
ChrX	stalkie_big_nohaplotig	exon	31752537	31752798	100	+	.	Parent=FBgn0031675.1.mrna1;Target=FBgn0031675.1 1 262 +
ChrX	stalkie_big_nohaplotig	exon	31752914	31753323	100	+	.	Parent=FBgn0031675.1.mrna1;Target=FBgn0031675.1 263 672 +
ChrX	stalkie_big_nohaplotig	exon	31753384	31754146	100	+	.	Parent=FBgn0031675.1.mrna1;Target=FBgn0031675.1 673 1435 +
ChrX	stalkie_big_nohaplotig	exon	31755757	31756073	100	+	.	Parent=FBgn0031675.1.mrna1;Target=FBgn0031675.1 1436 1752 +
ChrX	stalkie_big_nohaplotig	CDS	31752537	31752798	.	+	0	Parent=FBgn0031675.1.mrna1;Target=FBgn0031675.1 1 262 +
ChrX	stalkie_big_nohaplotig	CDS	31752914	31753323	.	+	2	Parent=FBgn0031675.1.mrna1;Target=FBgn0031675.1 263 672 +
ChrX	stalkie_big_nohaplotig	CDS	31753384	31754146	.	+	0	Parent=FBgn0031675.1.mrna1;Target=FBgn0031675.1 673 1435 +
ChrX	stalkie_big_nohaplotig	CDS	31755757	31756073	.	+	2	Parent=FBgn0031675.1.mrna1;Target=FBgn0031675.1 1436 1752 +
ChrX	gffcl	locus	31756765	31757076	.	+	.	ID=RLOC_00001893;geneIDs=comp144583_c0_seq1.path1;transcripts=comp144583_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31756765	31757076	.	+	.	ID=comp144583_c0_seq1.mrna1;geneID=comp144583_c0_seq1.path1;Name=comp144583_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=304;mismatches=8;indels=0;unknowns=0;Target=comp144583_c0_seq1 312 1 .;CDS_Target=comp144583_c0_seq1 65 3 .;locus=RLOC_00001893
ChrX	stalkie_big_nohaplotig	exon	31756765	31757076	97	+	.	Parent=comp144583_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31756767	31756829	.	+	0	Parent=comp144583_c0_seq1.mrna1
ChrX	gffcl	locus	31757242	31757629	.	-	.	ID=RLOC_00001894;geneIDs=comp149359_c0_seq1.path1;transcripts=comp149359_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31757242	31757629	.	-	.	ID=comp149359_c0_seq1.mrna1;geneID=comp149359_c0_seq1.path1;Name=comp149359_c0_seq1;Dir=indeterminatecoverage=92.8;identity=98.5;matches=384;mismatches=3;indels=3;unknowns=0;Target=comp149359_c0_seq1 389 1 .;CDS_Target=comp149359_c0_seq1 21 1 .;locus=RLOC_00001894
ChrX	stalkie_big_nohaplotig	exon	31757242	31757629	98	-	.	Parent=comp149359_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31757609	31757629	.	-	0	Parent=comp149359_c0_seq1.mrna1
ChrX	gffcl	locus	31757788	31758178	.	-	.	ID=RLOC_00001895;geneIDs=comp118982_c0_seq1.path1;transcripts=comp118982_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31757788	31758178	.	-	.	ID=comp118982_c0_seq1.mrna1;geneID=comp118982_c0_seq1.path1;Name=comp118982_c0_seq1;Dir=indeterminatecoverage=98.0;identity=99.2;matches=389;mismatches=2;indels=1;unknowns=0;Target=comp118982_c0_seq1 400 9 .;CDS_Target=comp118982_c0_seq1 313 206 .;locus=RLOC_00001895
ChrX	stalkie_big_nohaplotig	exon	31757788	31758178	99	-	.	Parent=comp118982_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31757875	31757982	.	-	0	Parent=comp118982_c0_seq1.mrna1
ChrX	gffcl	locus	31758488	31758963	.	-	.	ID=RLOC_00001896;geneIDs=comp152005_c0_seq1.path1;transcripts=comp152005_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31758488	31758963	.	-	.	ID=comp152005_c0_seq1.mrna1;geneID=comp152005_c0_seq1.path1;Name=comp152005_c0_seq1;Dir=indeterminatecoverage=95.9;identity=95.3;matches=469;mismatches=7;indels=16;unknowns=0;Target=comp152005_c0_seq1 513 22 .;CDS_Target=comp152005_c0_seq1 96 22 .;locus=RLOC_00001896
ChrX	stalkie_big_nohaplotig	exon	31758488	31758963	95	-	.	Parent=comp152005_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31758889	31758963	.	-	0	Parent=comp152005_c0_seq1.mrna1
ChrX	gffcl	locus	31762177	31762725	.	-	.	ID=RLOC_00001897;geneIDs=FBgn0031674.path1;transcripts=FBgn0031674.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31762177	31762725	.	-	.	ID=FBgn0031674.mrna1;geneID=FBgn0031674.path1;Name=FBgn0031674;Dir=indeterminatecoverage=100.0;identity=100.0;matches=549;mismatches=0;indels=0;unknowns=0;Target=FBgn0031674 549 1 .;locus=RLOC_00001897
ChrX	stalkie_big_nohaplotig	exon	31762177	31762725	100	-	.	Parent=FBgn0031674.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31762177	31762725	.	-	0	Parent=FBgn0031674.mrna1
ChrX	gffcl	locus	31763137	31771739	.	-	.	ID=RLOC_00001898;geneIDs=FBgn0053995.1.path1;transcripts=FBgn0053995.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31763137	31771739	.	-	.	ID=FBgn0053995.1.mrna1;geneID=FBgn0053995.1.path1;Name=FBgn0053995.1;Dir=sensecoverage=100.0;identity=100.0;matches=378;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001898
ChrX	stalkie_big_nohaplotig	exon	31763137	31763328	100	-	.	Parent=FBgn0053995.1.mrna1;Target=FBgn0053995.1 187 378 +
ChrX	stalkie_big_nohaplotig	exon	31765751	31765854	100	-	.	Parent=FBgn0053995.1.mrna1;Target=FBgn0053995.1 83 186 +
ChrX	stalkie_big_nohaplotig	exon	31771658	31771739	100	-	.	Parent=FBgn0053995.1.mrna1;Target=FBgn0053995.1 1 82 +
ChrX	stalkie_big_nohaplotig	CDS	31763137	31763328	.	-	0	Parent=FBgn0053995.1.mrna1;Target=FBgn0053995.1 187 378 +
ChrX	stalkie_big_nohaplotig	CDS	31765751	31765854	.	-	2	Parent=FBgn0053995.1.mrna1;Target=FBgn0053995.1 83 186 +
ChrX	stalkie_big_nohaplotig	CDS	31771658	31771739	.	-	0	Parent=FBgn0053995.1.mrna1;Target=FBgn0053995.1 1 82 +
ChrX	gffcl	locus	31763803	31780337	.	+	.	ID=RLOC_00001899;geneIDs=comp149903_c0_seq1.path1;transcripts=comp149903_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31763803	31780337	.	+	.	ID=comp149903_c0_seq1.mrna1;geneID=comp149903_c0_seq1.path1;Name=comp149903_c0_seq1;Dir=indeterminatecoverage=95.6;identity=99.9;matches=896;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001899
ChrX	stalkie_big_nohaplotig	exon	31763803	31763808	100	+	.	Parent=comp149903_c0_seq1.mrna1;Target=comp149903_c0_seq1 46 41 .
ChrX	stalkie_big_nohaplotig	exon	31770335	31770336	100	+	.	Parent=comp149903_c0_seq1.mrna1;Target=comp149903_c0_seq1 48 47 .
ChrX	stalkie_big_nohaplotig	exon	31776991	31776994	100	+	.	Parent=comp149903_c0_seq1.mrna1;Target=comp149903_c0_seq1 52 49 .
ChrX	stalkie_big_nohaplotig	exon	31779453	31780337	99	+	.	Parent=comp149903_c0_seq1.mrna1;Target=comp149903_c0_seq1 937 53 .
ChrX	stalkie_big_nohaplotig	CDS	31763804	31763808	.	+	0	Parent=comp149903_c0_seq1.mrna1;Target=comp149903_c0_seq1 46 42 .
ChrX	stalkie_big_nohaplotig	CDS	31770335	31770336	.	+	1	Parent=comp149903_c0_seq1.mrna1;Target=comp149903_c0_seq1 48 47 .
ChrX	stalkie_big_nohaplotig	CDS	31776991	31776994	.	+	2	Parent=comp149903_c0_seq1.mrna1;Target=comp149903_c0_seq1 52 49 .
ChrX	stalkie_big_nohaplotig	CDS	31779453	31779543	.	+	1	Parent=comp149903_c0_seq1.mrna1;Target=comp149903_c0_seq1 143 53 .
ChrX	gffcl	locus	31776230	31779113	.	+	.	ID=RLOC_00001900;geneIDs=FBgn0031673.1.path1;transcripts=FBgn0031673.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31776230	31779113	.	+	.	ID=FBgn0031673.1.mrna1;geneID=FBgn0031673.1.path1;Name=FBgn0031673.1;Dir=sensecoverage=100.0;identity=100.0;matches=1107;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001900
ChrX	stalkie_big_nohaplotig	exon	31776230	31776259	100	+	.	Parent=FBgn0031673.1.mrna1;Target=FBgn0031673.1 1 30 +
ChrX	stalkie_big_nohaplotig	exon	31776401	31776674	100	+	.	Parent=FBgn0031673.1.mrna1;Target=FBgn0031673.1 31 304 +
ChrX	stalkie_big_nohaplotig	exon	31777110	31777257	100	+	.	Parent=FBgn0031673.1.mrna1;Target=FBgn0031673.1 305 452 +
ChrX	stalkie_big_nohaplotig	exon	31778459	31779113	100	+	.	Parent=FBgn0031673.1.mrna1;Target=FBgn0031673.1 453 1107 +
ChrX	stalkie_big_nohaplotig	CDS	31776230	31776259	.	+	0	Parent=FBgn0031673.1.mrna1;Target=FBgn0031673.1 1 30 +
ChrX	stalkie_big_nohaplotig	CDS	31776401	31776674	.	+	0	Parent=FBgn0031673.1.mrna1;Target=FBgn0031673.1 31 304 +
ChrX	stalkie_big_nohaplotig	CDS	31777110	31777257	.	+	2	Parent=FBgn0031673.1.mrna1;Target=FBgn0031673.1 305 452 +
ChrX	stalkie_big_nohaplotig	CDS	31778459	31779113	.	+	1	Parent=FBgn0031673.1.mrna1;Target=FBgn0031673.1 453 1107 +
ChrX	gffcl	locus	31782351	31783530	.	-	.	ID=RLOC_00001901;geneIDs=comp130527_c0_seq1.path1;transcripts=comp130527_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31782351	31783530	.	-	.	ID=comp130527_c0_seq1.mrna1;geneID=comp130527_c0_seq1.path1;Name=comp130527_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1175;mismatches=1;indels=4;unknowns=0;Target=comp130527_c0_seq1 1176 1 .;CDS_Target=comp130527_c0_seq1 522 391 .;locus=RLOC_00001901
ChrX	stalkie_big_nohaplotig	exon	31782351	31783530	99	-	.	Parent=comp130527_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31783009	31783140	.	-	0	Parent=comp130527_c0_seq1.mrna1
ChrX	gffcl	locus	31783918	31784536	.	-	.	ID=RLOC_00001902;geneIDs=comp153860_c0_seq1.path1;transcripts=comp153860_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31783918	31784536	.	-	.	ID=comp153860_c0_seq1.mrna1;geneID=comp153860_c0_seq1.path1;Name=comp153860_c0_seq1;Dir=indeterminatecoverage=97.9;identity=98.2;matches=609;mismatches=9;indels=2;unknowns=0;Target=comp153860_c0_seq1 619 1 .;CDS_Target=comp153860_c0_seq1 103 2 .;locus=RLOC_00001902
ChrX	stalkie_big_nohaplotig	exon	31783918	31784536	98	-	.	Parent=comp153860_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31784434	31784535	.	-	0	Parent=comp153860_c0_seq1.mrna1
ChrX	gffcl	locus	31794234	31800667	.	-	.	ID=RLOC_00001904;geneIDs=FBgn0000299.1.path1;transcripts=FBgn0000299.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31794234	31800667	.	-	.	ID=FBgn0000299.1.mrna1;geneID=FBgn0000299.1.path1;Name=FBgn0000299.1;Dir=sensecoverage=100.0;identity=100.0;matches=5352;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001904
ChrX	stalkie_big_nohaplotig	exon	31794234	31794488	100	-	.	Parent=FBgn0000299.1.mrna1;Target=FBgn0000299.1 5098 5352 +
ChrX	stalkie_big_nohaplotig	exon	31794559	31795703	100	-	.	Parent=FBgn0000299.1.mrna1;Target=FBgn0000299.1 3953 5097 +
ChrX	stalkie_big_nohaplotig	exon	31795759	31796727	100	-	.	Parent=FBgn0000299.1.mrna1;Target=FBgn0000299.1 2984 3952 +
ChrX	stalkie_big_nohaplotig	exon	31796791	31798241	100	-	.	Parent=FBgn0000299.1.mrna1;Target=FBgn0000299.1 1533 2983 +
ChrX	stalkie_big_nohaplotig	exon	31798305	31798801	100	-	.	Parent=FBgn0000299.1.mrna1;Target=FBgn0000299.1 1036 1532 +
ChrX	stalkie_big_nohaplotig	exon	31798858	31799811	100	-	.	Parent=FBgn0000299.1.mrna1;Target=FBgn0000299.1 82 1035 +
ChrX	stalkie_big_nohaplotig	exon	31799891	31799939	100	-	.	Parent=FBgn0000299.1.mrna1;Target=FBgn0000299.1 33 81 +
ChrX	stalkie_big_nohaplotig	exon	31800636	31800667	100	-	.	Parent=FBgn0000299.1.mrna1;Target=FBgn0000299.1 1 32 +
ChrX	stalkie_big_nohaplotig	CDS	31794234	31794488	.	-	0	Parent=FBgn0000299.1.mrna1;Target=FBgn0000299.1 5098 5352 +
ChrX	stalkie_big_nohaplotig	CDS	31794559	31795703	.	-	2	Parent=FBgn0000299.1.mrna1;Target=FBgn0000299.1 3953 5097 +
ChrX	stalkie_big_nohaplotig	CDS	31795759	31796727	.	-	2	Parent=FBgn0000299.1.mrna1;Target=FBgn0000299.1 2984 3952 +
ChrX	stalkie_big_nohaplotig	CDS	31796791	31798241	.	-	1	Parent=FBgn0000299.1.mrna1;Target=FBgn0000299.1 1533 2983 +
ChrX	stalkie_big_nohaplotig	CDS	31798305	31798801	.	-	0	Parent=FBgn0000299.1.mrna1;Target=FBgn0000299.1 1036 1532 +
ChrX	stalkie_big_nohaplotig	CDS	31798858	31799811	.	-	0	Parent=FBgn0000299.1.mrna1;Target=FBgn0000299.1 82 1035 +
ChrX	stalkie_big_nohaplotig	CDS	31799891	31799939	.	-	1	Parent=FBgn0000299.1.mrna1;Target=FBgn0000299.1 33 81 +
ChrX	stalkie_big_nohaplotig	CDS	31800636	31800667	.	-	0	Parent=FBgn0000299.1.mrna1;Target=FBgn0000299.1 1 32 +
ChrX	gffcl	locus	31800705	31801276	.	-	.	ID=RLOC_00001905;geneIDs=comp1031484_c0_seq1.path1;transcripts=comp1031484_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31800705	31801276	.	-	.	ID=comp1031484_c0_seq1.mrna1;geneID=comp1031484_c0_seq1.path1;Name=comp1031484_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=307;mismatches=1;indels=0;unknowns=0;Target=comp1031484_c0_seq1 265 306 .;locus=RLOC_00001905
ChrX	stalkie_big_nohaplotig	exon	31800705	31800728	100	-	.	Parent=comp1031484_c0_seq1.mrna1;Target=comp1031484_c0_seq1 1 24 -
ChrX	stalkie_big_nohaplotig	exon	31800993	31801276	99	-	.	Parent=comp1031484_c0_seq1.mrna1;Target=comp1031484_c0_seq1 25 308 -
ChrX	stalkie_big_nohaplotig	CDS	31801233	31801274	.	-	0	Parent=comp1031484_c0_seq1.mrna1
ChrX	gffcl	locus	31815437	31876879	.	+	.	ID=RLOC_00001906;geneIDs=FBgn0016075.1.path1;transcripts=FBgn0016075.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31815437	31876879	.	+	.	ID=FBgn0016075.1.mrna1;geneID=FBgn0016075.1.path1;Name=FBgn0016075.1;Dir=sensecoverage=100.0;identity=100.0;matches=5523;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001906
ChrX	stalkie_big_nohaplotig	exon	31815437	31815589	100	+	.	Parent=FBgn0016075.1.mrna1;Target=FBgn0016075.1 1 153 +
ChrX	stalkie_big_nohaplotig	exon	31869202	31869396	100	+	.	Parent=FBgn0016075.1.mrna1;Target=FBgn0016075.1 154 348 +
ChrX	stalkie_big_nohaplotig	exon	31871349	31871393	100	+	.	Parent=FBgn0016075.1.mrna1;Target=FBgn0016075.1 349 393 +
ChrX	stalkie_big_nohaplotig	exon	31871452	31873211	100	+	.	Parent=FBgn0016075.1.mrna1;Target=FBgn0016075.1 394 2153 +
ChrX	stalkie_big_nohaplotig	exon	31873273	31874123	100	+	.	Parent=FBgn0016075.1.mrna1;Target=FBgn0016075.1 2154 3004 +
ChrX	stalkie_big_nohaplotig	exon	31874182	31876093	100	+	.	Parent=FBgn0016075.1.mrna1;Target=FBgn0016075.1 3005 4916 +
ChrX	stalkie_big_nohaplotig	exon	31876162	31876276	100	+	.	Parent=FBgn0016075.1.mrna1;Target=FBgn0016075.1 4917 5031 +
ChrX	stalkie_big_nohaplotig	exon	31876330	31876553	100	+	.	Parent=FBgn0016075.1.mrna1;Target=FBgn0016075.1 5032 5255 +
ChrX	stalkie_big_nohaplotig	exon	31876612	31876879	100	+	.	Parent=FBgn0016075.1.mrna1;Target=FBgn0016075.1 5256 5523 +
ChrX	stalkie_big_nohaplotig	CDS	31815437	31815589	.	+	0	Parent=FBgn0016075.1.mrna1;Target=FBgn0016075.1 1 153 +
ChrX	stalkie_big_nohaplotig	CDS	31869202	31869396	.	+	0	Parent=FBgn0016075.1.mrna1;Target=FBgn0016075.1 154 348 +
ChrX	stalkie_big_nohaplotig	CDS	31871349	31871393	.	+	0	Parent=FBgn0016075.1.mrna1;Target=FBgn0016075.1 349 393 +
ChrX	stalkie_big_nohaplotig	CDS	31871452	31873211	.	+	0	Parent=FBgn0016075.1.mrna1;Target=FBgn0016075.1 394 2153 +
ChrX	stalkie_big_nohaplotig	CDS	31873273	31874123	.	+	1	Parent=FBgn0016075.1.mrna1;Target=FBgn0016075.1 2154 3004 +
ChrX	stalkie_big_nohaplotig	CDS	31874182	31876093	.	+	2	Parent=FBgn0016075.1.mrna1;Target=FBgn0016075.1 3005 4916 +
ChrX	stalkie_big_nohaplotig	CDS	31876162	31876276	.	+	1	Parent=FBgn0016075.1.mrna1;Target=FBgn0016075.1 4917 5031 +
ChrX	stalkie_big_nohaplotig	CDS	31876330	31876553	.	+	0	Parent=FBgn0016075.1.mrna1;Target=FBgn0016075.1 5032 5255 +
ChrX	stalkie_big_nohaplotig	CDS	31876612	31876879	.	+	1	Parent=FBgn0016075.1.mrna1;Target=FBgn0016075.1 5256 5523 +
ChrX	gffcl	locus	31879596	31884197	.	-	.	ID=RLOC_00001907;geneIDs=FBgn0031670.1.path1;transcripts=FBgn0031670.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31879596	31884197	.	-	.	ID=FBgn0031670.1.mrna1;geneID=FBgn0031670.1.path1;Name=FBgn0031670.1;Dir=sensecoverage=100.0;identity=100.0;matches=612;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001907
ChrX	stalkie_big_nohaplotig	exon	31879596	31879754	100	-	.	Parent=FBgn0031670.1.mrna1;Target=FBgn0031670.1 454 612 +
ChrX	stalkie_big_nohaplotig	exon	31883684	31883972	100	-	.	Parent=FBgn0031670.1.mrna1;Target=FBgn0031670.1 165 453 +
ChrX	stalkie_big_nohaplotig	exon	31884034	31884197	100	-	.	Parent=FBgn0031670.1.mrna1;Target=FBgn0031670.1 1 164 +
ChrX	stalkie_big_nohaplotig	CDS	31879596	31879754	.	-	0	Parent=FBgn0031670.1.mrna1;Target=FBgn0031670.1 454 612 +
ChrX	stalkie_big_nohaplotig	CDS	31883684	31883972	.	-	1	Parent=FBgn0031670.1.mrna1;Target=FBgn0031670.1 165 453 +
ChrX	stalkie_big_nohaplotig	CDS	31884034	31884197	.	-	0	Parent=FBgn0031670.1.mrna1;Target=FBgn0031670.1 1 164 +
ChrX	gffcl	locus	31890487	31894613	.	-	.	ID=RLOC_00001908;geneIDs=FBgn0024352.1.path1;transcripts=FBgn0024352.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31890487	31894613	.	-	.	ID=FBgn0024352.1.mrna1;geneID=FBgn0024352.1.path1;Name=FBgn0024352.1;Dir=sensecoverage=100.0;identity=100.0;matches=1482;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001908
ChrX	stalkie_big_nohaplotig	exon	31890487	31890556	100	-	.	Parent=FBgn0024352.1.mrna1;Target=FBgn0024352.1 1413 1482 +
ChrX	stalkie_big_nohaplotig	exon	31890631	31890863	100	-	.	Parent=FBgn0024352.1.mrna1;Target=FBgn0024352.1 1180 1412 +
ChrX	stalkie_big_nohaplotig	exon	31893081	31893940	100	-	.	Parent=FBgn0024352.1.mrna1;Target=FBgn0024352.1 320 1179 +
ChrX	stalkie_big_nohaplotig	exon	31894233	31894515	100	-	.	Parent=FBgn0024352.1.mrna1;Target=FBgn0024352.1 37 319 +
ChrX	stalkie_big_nohaplotig	exon	31894578	31894613	100	-	.	Parent=FBgn0024352.1.mrna1;Target=FBgn0024352.1 1 36 +
ChrX	stalkie_big_nohaplotig	CDS	31890487	31890556	.	-	1	Parent=FBgn0024352.1.mrna1;Target=FBgn0024352.1 1413 1482 +
ChrX	stalkie_big_nohaplotig	CDS	31890631	31890863	.	-	0	Parent=FBgn0024352.1.mrna1;Target=FBgn0024352.1 1180 1412 +
ChrX	stalkie_big_nohaplotig	CDS	31893081	31893940	.	-	2	Parent=FBgn0024352.1.mrna1;Target=FBgn0024352.1 320 1179 +
ChrX	stalkie_big_nohaplotig	CDS	31894233	31894515	.	-	0	Parent=FBgn0024352.1.mrna1;Target=FBgn0024352.1 37 319 +
ChrX	stalkie_big_nohaplotig	CDS	31894578	31894613	.	-	0	Parent=FBgn0024352.1.mrna1;Target=FBgn0024352.1 1 36 +
ChrX	gffcl	locus	31896127	31896527	.	-	.	ID=RLOC_00001909;geneIDs=comp130596_c0_seq1.path1;transcripts=comp130596_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31896127	31896527	.	-	.	ID=comp130596_c0_seq1.mrna1;geneID=comp130596_c0_seq1.path1;Name=comp130596_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=401;mismatches=0;indels=0;unknowns=0;Target=comp130596_c0_seq1 401 1 .;CDS_Target=comp130596_c0_seq1 143 3 .;locus=RLOC_00001909
ChrX	stalkie_big_nohaplotig	exon	31896127	31896527	100	-	.	Parent=comp130596_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31896385	31896525	.	-	0	Parent=comp130596_c0_seq1.mrna1
ChrX	gffcl	locus	31902665	31903705	.	+	.	ID=RLOC_00001910;geneIDs=FBgn0017457.1.path1;transcripts=FBgn0017457.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31902665	31903705	.	+	.	ID=FBgn0017457.1.mrna1;geneID=FBgn0017457.1.path1;Name=FBgn0017457.1;Dir=sensecoverage=100.0;identity=100.0;matches=924;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001910
ChrX	stalkie_big_nohaplotig	exon	31902665	31902900	100	+	.	Parent=FBgn0017457.1.mrna1;Target=FBgn0017457.1 1 236 +
ChrX	stalkie_big_nohaplotig	exon	31902959	31903468	100	+	.	Parent=FBgn0017457.1.mrna1;Target=FBgn0017457.1 237 746 +
ChrX	stalkie_big_nohaplotig	exon	31903528	31903705	100	+	.	Parent=FBgn0017457.1.mrna1;Target=FBgn0017457.1 747 924 +
ChrX	stalkie_big_nohaplotig	CDS	31902665	31902900	.	+	0	Parent=FBgn0017457.1.mrna1;Target=FBgn0017457.1 1 236 +
ChrX	stalkie_big_nohaplotig	CDS	31902959	31903468	.	+	1	Parent=FBgn0017457.1.mrna1;Target=FBgn0017457.1 237 746 +
ChrX	stalkie_big_nohaplotig	CDS	31903528	31903705	.	+	1	Parent=FBgn0017457.1.mrna1;Target=FBgn0017457.1 747 924 +
ChrX	gffcl	locus	31911589	31912626	.	+	.	ID=RLOC_00001911;geneIDs=comp155253_c1_seq1.path1;transcripts=comp155253_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31911589	31912626	.	+	.	ID=comp155253_c1_seq1.mrna1;geneID=comp155253_c1_seq1.path1;Name=comp155253_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1034;mismatches=4;indels=0;unknowns=0;Target=comp155253_c1_seq1 1038 1 .;CDS_Target=comp155253_c1_seq1 510 328 .;locus=RLOC_00001911
ChrX	stalkie_big_nohaplotig	exon	31911589	31912626	99	+	.	Parent=comp155253_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31911916	31912098	.	+	0	Parent=comp155253_c1_seq1.mrna1
ChrX	gffcl	locus	31913361	31913734	.	-	.	ID=RLOC_00001912;geneIDs=comp147121_c0_seq1.path1;transcripts=comp147121_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31913361	31913734	.	-	.	ID=comp147121_c0_seq1.mrna1;geneID=comp147121_c0_seq1.path1;Name=comp147121_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=374;mismatches=0;indels=0;unknowns=0;Target=comp147121_c0_seq1 374 1 .;CDS_Target=comp147121_c0_seq1 131 3 .;locus=RLOC_00001912
ChrX	stalkie_big_nohaplotig	exon	31913361	31913734	100	-	.	Parent=comp147121_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31913604	31913732	.	-	0	Parent=comp147121_c0_seq1.mrna1
ChrX	gffcl	locus	31914295	31914726	.	-	.	ID=RLOC_00001913;geneIDs=comp116007_c0_seq1.path1;transcripts=comp116007_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31914295	31914726	.	-	.	ID=comp116007_c0_seq1.mrna1;geneID=comp116007_c0_seq1.path1;Name=comp116007_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.4;matches=427;mismatches=5;indels=11;unknowns=0;Target=comp116007_c0_seq1 443 1 .;CDS_Target=comp116007_c0_seq1 211 95 .;locus=RLOC_00001913
ChrX	stalkie_big_nohaplotig	exon	31914295	31914726	96	-	.	Parent=comp116007_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31914516	31914632	.	-	0	Parent=comp116007_c0_seq1.mrna1
ChrX	gffcl	locus	31914964	31930846	.	+	.	ID=RLOC_00001914;geneIDs=FBgn0031245.1.path1;transcripts=FBgn0031245.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31914964	31930846	.	+	.	ID=FBgn0031245.1.mrna1;geneID=FBgn0031245.1.path1;Name=FBgn0031245.1;Dir=sensecoverage=100.0;identity=99.7;matches=742;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001914
ChrX	stalkie_big_nohaplotig	exon	31914964	31915164	99	+	.	Parent=FBgn0031245.1.mrna1;Target=FBgn0031245.1 1 201 +
ChrX	stalkie_big_nohaplotig	exon	31930239	31930459	100	+	.	Parent=FBgn0031245.1.mrna1;Target=FBgn0031245.1 202 422 +
ChrX	stalkie_big_nohaplotig	exon	31930525	31930846	100	+	.	Parent=FBgn0031245.1.mrna1;Target=FBgn0031245.1 423 744 +
ChrX	stalkie_big_nohaplotig	CDS	31914964	31915164	.	+	0	Parent=FBgn0031245.1.mrna1;Target=FBgn0031245.1 1 201 +
ChrX	stalkie_big_nohaplotig	CDS	31930239	31930459	.	+	0	Parent=FBgn0031245.1.mrna1;Target=FBgn0031245.1 202 422 +
ChrX	stalkie_big_nohaplotig	CDS	31930525	31930846	.	+	1	Parent=FBgn0031245.1.mrna1;Target=FBgn0031245.1 423 744 +
ChrX	gffcl	locus	31925304	31926307	.	-	.	ID=RLOC_00001915;geneIDs=FBgn0025686.1.path1;transcripts=FBgn0025686.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31925304	31926307	.	-	.	ID=FBgn0025686.1.mrna1;geneID=FBgn0025686.1.path1;Name=FBgn0025686.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1004;mismatches=0;indels=1;unknowns=0;Target=FBgn0025686.1 1005 1 .;locus=RLOC_00001915
ChrX	stalkie_big_nohaplotig	exon	31925304	31926307	99	-	.	Parent=FBgn0025686.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31925304	31926307	.	-	0	Parent=FBgn0025686.1.mrna1
ChrX	gffcl	locus	31929022	31929462	.	-	.	ID=RLOC_00001916;geneIDs=comp146946_c0_seq1.path1;transcripts=comp146946_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31929022	31929462	.	-	.	ID=comp146946_c0_seq1.mrna1;geneID=comp146946_c0_seq1.path1;Name=comp146946_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=441;mismatches=0;indels=0;unknowns=0;Target=comp146946_c0_seq1 441 1 .;CDS_Target=comp146946_c0_seq1 242 159 .;locus=RLOC_00001916
ChrX	stalkie_big_nohaplotig	exon	31929022	31929462	100	-	.	Parent=comp146946_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31929221	31929304	.	-	0	Parent=comp146946_c0_seq1.mrna1
ChrX	gffcl	locus	31934199	31937087	.	+	.	ID=RLOC_00001917;geneIDs=FBgn0031244.1.path1;transcripts=FBgn0031244.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31934199	31937087	.	+	.	ID=FBgn0031244.1.mrna1;geneID=FBgn0031244.1.path1;Name=FBgn0031244.1;Dir=sensecoverage=100.0;identity=100.0;matches=864;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001917
ChrX	stalkie_big_nohaplotig	exon	31934199	31934507	100	+	.	Parent=FBgn0031244.1.mrna1;Target=FBgn0031244.1 1 309 +
ChrX	stalkie_big_nohaplotig	exon	31934585	31934805	100	+	.	Parent=FBgn0031244.1.mrna1;Target=FBgn0031244.1 310 530 +
ChrX	stalkie_big_nohaplotig	exon	31936754	31937087	100	+	.	Parent=FBgn0031244.1.mrna1;Target=FBgn0031244.1 531 864 +
ChrX	stalkie_big_nohaplotig	CDS	31934199	31934507	.	+	0	Parent=FBgn0031244.1.mrna1;Target=FBgn0031244.1 1 309 +
ChrX	stalkie_big_nohaplotig	CDS	31934585	31934805	.	+	0	Parent=FBgn0031244.1.mrna1;Target=FBgn0031244.1 310 530 +
ChrX	stalkie_big_nohaplotig	CDS	31936754	31937087	.	+	1	Parent=FBgn0031244.1.mrna1;Target=FBgn0031244.1 531 864 +
ChrX	gffcl	locus	31937438	31938530	.	-	.	ID=RLOC_00001918;geneIDs=comp155032_c0_seq1.path1;transcripts=comp155032_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31937438	31938530	.	-	.	ID=comp155032_c0_seq1.mrna1;geneID=comp155032_c0_seq1.path1;Name=comp155032_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.0;matches=1084;mismatches=8;indels=25;unknowns=0;Target=comp155032_c0_seq1 1116 1 .;CDS_Target=comp155032_c0_seq1 157 2 .;locus=RLOC_00001918
ChrX	stalkie_big_nohaplotig	exon	31937438	31938530	97	-	.	Parent=comp155032_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31938374	31938529	.	-	0	Parent=comp155032_c0_seq1.mrna1
ChrX	gffcl	locus	31940288	31940925	.	+	.	ID=RLOC_00001919;geneIDs=comp156222_c0_seq1.path1;transcripts=comp156222_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31940288	31940925	.	+	.	ID=comp156222_c0_seq1.mrna1;geneID=comp156222_c0_seq1.path1;Name=comp156222_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.7;matches=631;mismatches=7;indels=1;unknowns=0;Target=comp156222_c0_seq1 639 1 .;CDS_Target=comp156222_c0_seq1 422 336 .;locus=RLOC_00001919
ChrX	stalkie_big_nohaplotig	exon	31940288	31940925	98	+	.	Parent=comp156222_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31940622	31940708	.	+	0	Parent=comp156222_c0_seq1.mrna1
ChrX	gffcl	locus	31967241	31967591	.	+	.	ID=RLOC_00001920;geneIDs=comp113272_c0_seq1.path1;transcripts=comp113272_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	31967241	31967591	.	+	.	ID=comp113272_c0_seq1.mrna1;geneID=comp113272_c0_seq1.path1;Name=comp113272_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=350;mismatches=1;indels=0;unknowns=0;Target=comp113272_c0_seq1 351 1 .;CDS_Target=comp113272_c0_seq1 173 3 .;locus=RLOC_00001920
ChrX	stalkie_big_nohaplotig	exon	31967241	31967591	99	+	.	Parent=comp113272_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	31967243	31967413	.	+	0	Parent=comp113272_c0_seq1.mrna1
ChrX	gffcl	locus	32071934	32076269	.	-	.	ID=RLOC_00001921;geneIDs=FBgn0032693.1.path1;transcripts=FBgn0032693.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32071934	32076269	.	-	.	ID=FBgn0032693.1.mrna1;geneID=FBgn0032693.1.path1;Name=FBgn0032693.1;Dir=sensecoverage=100.0;identity=100.0;matches=1521;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001921
ChrX	stalkie_big_nohaplotig	exon	32071934	32072115	100	-	.	Parent=FBgn0032693.1.mrna1;Target=FBgn0032693.1 1340 1521 +
ChrX	stalkie_big_nohaplotig	exon	32072189	32072437	100	-	.	Parent=FBgn0032693.1.mrna1;Target=FBgn0032693.1 1091 1339 +
ChrX	stalkie_big_nohaplotig	exon	32074468	32074710	100	-	.	Parent=FBgn0032693.1.mrna1;Target=FBgn0032693.1 848 1090 +
ChrX	stalkie_big_nohaplotig	exon	32074798	32074988	100	-	.	Parent=FBgn0032693.1.mrna1;Target=FBgn0032693.1 657 847 +
ChrX	stalkie_big_nohaplotig	exon	32075135	32075257	100	-	.	Parent=FBgn0032693.1.mrna1;Target=FBgn0032693.1 534 656 +
ChrX	stalkie_big_nohaplotig	exon	32075737	32076269	100	-	.	Parent=FBgn0032693.1.mrna1;Target=FBgn0032693.1 1 533 +
ChrX	stalkie_big_nohaplotig	CDS	32071934	32072115	.	-	2	Parent=FBgn0032693.1.mrna1;Target=FBgn0032693.1 1340 1521 +
ChrX	stalkie_big_nohaplotig	CDS	32072189	32072437	.	-	2	Parent=FBgn0032693.1.mrna1;Target=FBgn0032693.1 1091 1339 +
ChrX	stalkie_big_nohaplotig	CDS	32074468	32074710	.	-	2	Parent=FBgn0032693.1.mrna1;Target=FBgn0032693.1 848 1090 +
ChrX	stalkie_big_nohaplotig	CDS	32074798	32074988	.	-	1	Parent=FBgn0032693.1.mrna1;Target=FBgn0032693.1 657 847 +
ChrX	stalkie_big_nohaplotig	CDS	32075135	32075257	.	-	1	Parent=FBgn0032693.1.mrna1;Target=FBgn0032693.1 534 656 +
ChrX	stalkie_big_nohaplotig	CDS	32075737	32076269	.	-	0	Parent=FBgn0032693.1.mrna1;Target=FBgn0032693.1 1 533 +
ChrX	gffcl	locus	32097485	32098291	.	+	.	ID=RLOC_00001922;geneIDs=FBgn0032694.1.path1;transcripts=FBgn0032694.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32097485	32098291	.	+	.	ID=FBgn0032694.1.mrna1;geneID=FBgn0032694.1.path1;Name=FBgn0032694.1;Dir=indeterminatecoverage=93.7;identity=100.0;matches=807;mismatches=0;indels=0;unknowns=0;Target=FBgn0032694.1 861 55 .;locus=RLOC_00001922
ChrX	stalkie_big_nohaplotig	exon	32097485	32098291	100	+	.	Parent=FBgn0032694.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32097485	32098291	.	+	0	Parent=FBgn0032694.1.mrna1
ChrX	gffcl	locus	32099043	32099970	.	+	.	ID=RLOC_00001923;geneIDs=comp146914_c0_seq1.path1;transcripts=comp146914_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32099043	32099970	.	+	.	ID=comp146914_c0_seq1.mrna1;geneID=comp146914_c0_seq1.path1;Name=comp146914_c0_seq1;Dir=indeterminatecoverage=97.7;identity=97.7;matches=907;mismatches=2;indels=19;unknowns=0;Target=comp146914_c0_seq1 930 22 .;CDS_Target=comp146914_c0_seq1 776 723 .;locus=RLOC_00001923
ChrX	stalkie_big_nohaplotig	exon	32099043	32099970	97	+	.	Parent=comp146914_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32099763	32099816	.	+	0	Parent=comp146914_c0_seq1.mrna1
ChrX	gffcl	locus	32121529	32122272	.	+	.	ID=RLOC_00001924;geneIDs=comp146250_c1_seq1.path1;transcripts=comp146250_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32121529	32122272	.	+	.	ID=comp146250_c1_seq1.mrna1;geneID=comp146250_c1_seq1.path1;Name=comp146250_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=743;mismatches=1;indels=3;unknowns=0;Target=comp146250_c1_seq1 747 1 .;CDS_Target=comp146250_c1_seq1 677 603 .;locus=RLOC_00001924
ChrX	stalkie_big_nohaplotig	exon	32121529	32122272	99	+	.	Parent=comp146250_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32122131	32122202	.	+	0	Parent=comp146250_c1_seq1.mrna1
ChrX	gffcl	locus	32131242	32132434	.	+	.	ID=RLOC_00001925;geneIDs=FBgn0036214.1.path1;transcripts=FBgn0036214.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32131242	32132434	.	+	.	ID=FBgn0036214.1.mrna1;geneID=FBgn0036214.1.path1;Name=FBgn0036214.1;Dir=sensecoverage=100.0;identity=99.9;matches=1112;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001925
ChrX	stalkie_big_nohaplotig	exon	32131242	32131379	100	+	.	Parent=FBgn0036214.1.mrna1;Target=FBgn0036214.1 1 138 +
ChrX	stalkie_big_nohaplotig	exon	32131460	32132434	99	+	.	Parent=FBgn0036214.1.mrna1;Target=FBgn0036214.1 139 1113 +
ChrX	stalkie_big_nohaplotig	CDS	32131242	32131379	.	+	0	Parent=FBgn0036214.1.mrna1;Target=FBgn0036214.1 1 138 +
ChrX	stalkie_big_nohaplotig	CDS	32131460	32132434	.	+	0	Parent=FBgn0036214.1.mrna1;Target=FBgn0036214.1 139 1113 +
ChrX	gffcl	locus	32145567	32148837	.	-	.	ID=RLOC_00001926;geneIDs=comp159047_c3_seq1.path1;transcripts=comp159047_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32145567	32148837	.	-	.	ID=comp159047_c3_seq1.mrna1;geneID=comp159047_c3_seq1.path1;Name=comp159047_c3_seq1;Dir=sensecoverage=85.0;identity=99.4;matches=1122;mismatches=7;indels=0;unknowns=0;locus=RLOC_00001926
ChrX	stalkie_big_nohaplotig	exon	32145567	32146115	100	-	.	Parent=comp159047_c3_seq1.mrna1;Target=comp159047_c3_seq1 779 1327 +
ChrX	stalkie_big_nohaplotig	exon	32146413	32146574	99	-	.	Parent=comp159047_c3_seq1.mrna1;Target=comp159047_c3_seq1 617 778 +
ChrX	stalkie_big_nohaplotig	exon	32146746	32146859	100	-	.	Parent=comp159047_c3_seq1.mrna1;Target=comp159047_c3_seq1 503 616 +
ChrX	stalkie_big_nohaplotig	exon	32148534	32148837	98	-	.	Parent=comp159047_c3_seq1.mrna1;Target=comp159047_c3_seq1 199 502 +
ChrX	stalkie_big_nohaplotig	CDS	32145732	32146115	.	-	0	Parent=comp159047_c3_seq1.mrna1;Target=comp159047_c3_seq1 779 1162 +
ChrX	stalkie_big_nohaplotig	CDS	32146413	32146574	.	-	0	Parent=comp159047_c3_seq1.mrna1;Target=comp159047_c3_seq1 617 778 +
ChrX	stalkie_big_nohaplotig	CDS	32146746	32146853	.	-	0	Parent=comp159047_c3_seq1.mrna1;Target=comp159047_c3_seq1 509 616 +
ChrX	gffcl	locus	32169521	32170173	.	-	.	ID=RLOC_00001927;geneIDs=comp82691_c0_seq1.path1;transcripts=comp82691_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32169521	32170173	.	-	.	ID=comp82691_c0_seq1.mrna1;geneID=comp82691_c0_seq1.path1;Name=comp82691_c0_seq1;Dir=indeterminatecoverage=95.5;identity=99.4;matches=650;mismatches=3;indels=1;unknowns=0;Target=comp82691_c0_seq1 685 32 .;CDS_Target=comp82691_c0_seq1 613 446 .;locus=RLOC_00001927
ChrX	stalkie_big_nohaplotig	exon	32169521	32170173	99	-	.	Parent=comp82691_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32169593	32169760	.	-	0	Parent=comp82691_c0_seq1.mrna1
ChrX	gffcl	locus	32185853	33979858	.	-	.	ID=RLOC_00001928;geneIDs=comp161026_c0_seq1.path1;transcripts=comp161026_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32185853	33979858	.	-	.	ID=comp161026_c0_seq1.mrna1;geneID=comp161026_c0_seq1.path1;Name=comp161026_c0_seq1;Dir=indeterminatecoverage=95.3;identity=99.6;matches=1918;mismatches=3;indels=4;unknowns=0;Target=comp161026_c0_seq1 938 759 .;locus=RLOC_00001928
ChrX	stalkie_big_nohaplotig	exon	32185853	32185858	100	-	.	Parent=comp161026_c0_seq1.mrna1;Target=comp161026_c0_seq1 1938 1933 .
ChrX	stalkie_big_nohaplotig	exon	32188661	32188665	100	-	.	Parent=comp161026_c0_seq1.mrna1;Target=comp161026_c0_seq1 1932 1928 .
ChrX	stalkie_big_nohaplotig	exon	32195471	32195473	100	-	.	Parent=comp161026_c0_seq1.mrna1;Target=comp161026_c0_seq1 1927 1925 .
ChrX	stalkie_big_nohaplotig	exon	32199387	32199388	100	-	.	Parent=comp161026_c0_seq1.mrna1;Target=comp161026_c0_seq1 1924 1923 .
ChrX	stalkie_big_nohaplotig	exon	32203049	32203053	100	-	.	Parent=comp161026_c0_seq1.mrna1;Target=comp161026_c0_seq1 1922 1918 .
ChrX	stalkie_big_nohaplotig	exon	32206918	32206926	100	-	.	Parent=comp161026_c0_seq1.mrna1;Target=comp161026_c0_seq1 1917 1909 .
ChrX	stalkie_big_nohaplotig	exon	33977968	33979858	99	-	.	Parent=comp161026_c0_seq1.mrna1;Target=comp161026_c0_seq1 1908 14 .
ChrX	stalkie_big_nohaplotig	CDS	33978935	33979114	.	-	0	Parent=comp161026_c0_seq1.mrna1
ChrX	gffcl	locus	32197263	32217018	.	+	.	ID=RLOC_00001929;geneIDs=FBgn0032886.1.path1,comp144032_c0_seq1.path1;transcripts=FBgn0032886.1.mrna1,comp144032_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32197263	32217018	.	+	.	ID=FBgn0032886.1.mrna1;geneID=FBgn0032886.1.path1;Name=FBgn0032886.1;Dir=sensecoverage=100.0;identity=100.0;matches=657;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001929
ChrX	stalkie_big_nohaplotig	exon	32197263	32197356	100	+	.	Parent=FBgn0032886.1.mrna1;Target=FBgn0032886.1 1 94 +
ChrX	stalkie_big_nohaplotig	exon	32213804	32214083	100	+	.	Parent=FBgn0032886.1.mrna1;Target=FBgn0032886.1 95 374 +
ChrX	stalkie_big_nohaplotig	exon	32216736	32217018	100	+	.	Parent=FBgn0032886.1.mrna1;Target=FBgn0032886.1 375 657 +
ChrX	stalkie_big_nohaplotig	CDS	32197263	32197356	.	+	0	Parent=FBgn0032886.1.mrna1;Target=FBgn0032886.1 1 94 +
ChrX	stalkie_big_nohaplotig	CDS	32213804	32214083	.	+	2	Parent=FBgn0032886.1.mrna1;Target=FBgn0032886.1 95 374 +
ChrX	stalkie_big_nohaplotig	CDS	32216736	32217018	.	+	1	Parent=FBgn0032886.1.mrna1;Target=FBgn0032886.1 375 657 +
ChrX	stalkie_big_nohaplotig	mRNA	32206285	32213843	.	+	.	ID=comp144032_c0_seq1.mrna1;geneID=comp144032_c0_seq1.path1;Name=comp144032_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=942;mismatches=3;indels=0;unknowns=0;Target=comp144032_c0_seq1 707 877 .;locus=RLOC_00001929
ChrX	stalkie_big_nohaplotig	exon	32206285	32207189	99	+	.	Parent=comp144032_c0_seq1.mrna1;Target=comp144032_c0_seq1 41 945 -
ChrX	stalkie_big_nohaplotig	exon	32213804	32213843	97	+	.	Parent=comp144032_c0_seq1.mrna1;Target=comp144032_c0_seq1 1 40 -
ChrX	stalkie_big_nohaplotig	CDS	32206353	32206523	.	+	0	Parent=comp144032_c0_seq1.mrna1
ChrX	gffcl	locus	32251203	32259969	.	.	.	ID=RLOC_00001930;geneIDs=FBgn0032889.1.path1,comp210477_c0_seq1.path1;transcripts=FBgn0032889.1.mrna1,comp210477_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32251203	32259969	.	+	.	ID=FBgn0032889.1.mrna1;geneID=FBgn0032889.1.path1;Name=FBgn0032889.1;Dir=sensecoverage=100.0;identity=100.0;matches=1068;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001930
ChrX	stalkie_big_nohaplotig	exon	32251203	32251263	100	+	.	Parent=FBgn0032889.1.mrna1;Target=FBgn0032889.1 1 61 +
ChrX	stalkie_big_nohaplotig	exon	32256010	32256436	100	+	.	Parent=FBgn0032889.1.mrna1;Target=FBgn0032889.1 62 488 +
ChrX	stalkie_big_nohaplotig	exon	32256512	32256849	100	+	.	Parent=FBgn0032889.1.mrna1;Target=FBgn0032889.1 489 826 +
ChrX	stalkie_big_nohaplotig	exon	32256915	32257040	100	+	.	Parent=FBgn0032889.1.mrna1;Target=FBgn0032889.1 827 952 +
ChrX	stalkie_big_nohaplotig	exon	32259854	32259969	100	+	.	Parent=FBgn0032889.1.mrna1;Target=FBgn0032889.1 953 1068 +
ChrX	stalkie_big_nohaplotig	CDS	32251203	32251263	.	+	0	Parent=FBgn0032889.1.mrna1;Target=FBgn0032889.1 1 61 +
ChrX	stalkie_big_nohaplotig	CDS	32256010	32256436	.	+	2	Parent=FBgn0032889.1.mrna1;Target=FBgn0032889.1 62 488 +
ChrX	stalkie_big_nohaplotig	CDS	32256512	32256849	.	+	1	Parent=FBgn0032889.1.mrna1;Target=FBgn0032889.1 489 826 +
ChrX	stalkie_big_nohaplotig	CDS	32256915	32257040	.	+	2	Parent=FBgn0032889.1.mrna1;Target=FBgn0032889.1 827 952 +
ChrX	stalkie_big_nohaplotig	CDS	32259854	32259969	.	+	2	Parent=FBgn0032889.1.mrna1;Target=FBgn0032889.1 953 1068 +
ChrX	stalkie_big_nohaplotig	mRNA	32255793	32256029	.	-	.	ID=comp210477_c0_seq1.mrna1;geneID=comp210477_c0_seq1.path1;Name=comp210477_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=237;mismatches=0;indels=0;unknowns=0;Target=comp210477_c0_seq1 237 1 .;CDS_Target=comp210477_c0_seq1 151 2 .;locus=RLOC_00001930
ChrX	stalkie_big_nohaplotig	exon	32255793	32256029	100	-	.	Parent=comp210477_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32255879	32256028	.	-	0	Parent=comp210477_c0_seq1.mrna1
ChrX	gffcl	locus	32259164	32259382	.	-	.	ID=RLOC_00001931;geneIDs=comp130698_c0_seq1.path2;transcripts=comp130698_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	32259164	32259382	.	-	.	ID=comp130698_c0_seq1.mrna2;geneID=comp130698_c0_seq1.path2;Name=comp130698_c0_seq1;Dir=indeterminatecoverage=69.7;identity=100.0;matches=219;mismatches=0;indels=0;unknowns=0;Target=comp130698_c0_seq1 314 96 .;CDS_Target=comp130698_c0_seq1 292 215 .;locus=RLOC_00001931
ChrX	stalkie_big_nohaplotig	exon	32259164	32259382	100	-	.	Parent=comp130698_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	32259186	32259263	.	-	0	Parent=comp130698_c0_seq1.mrna2
ChrX	gffcl	locus	32261435	32266540	.	+	.	ID=RLOC_00001932;geneIDs=FBgn0051673.1.path1;transcripts=FBgn0051673.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32261435	32266540	.	+	.	ID=FBgn0051673.1.mrna1;geneID=FBgn0051673.1.path1;Name=FBgn0051673.1;Dir=sensecoverage=100.0;identity=99.8;matches=988;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001932
ChrX	stalkie_big_nohaplotig	exon	32261435	32261850	100	+	.	Parent=FBgn0051673.1.mrna1;Target=FBgn0051673.1 1 416 +
ChrX	stalkie_big_nohaplotig	exon	32265854	32266185	99	+	.	Parent=FBgn0051673.1.mrna1;Target=FBgn0051673.1 417 748 +
ChrX	stalkie_big_nohaplotig	exon	32266237	32266362	100	+	.	Parent=FBgn0051673.1.mrna1;Target=FBgn0051673.1 749 874 +
ChrX	stalkie_big_nohaplotig	exon	32266425	32266540	99	+	.	Parent=FBgn0051673.1.mrna1;Target=FBgn0051673.1 875 990 +
ChrX	stalkie_big_nohaplotig	CDS	32261435	32261850	.	+	0	Parent=FBgn0051673.1.mrna1;Target=FBgn0051673.1 1 416 +
ChrX	stalkie_big_nohaplotig	CDS	32265854	32266185	.	+	1	Parent=FBgn0051673.1.mrna1;Target=FBgn0051673.1 417 748 +
ChrX	stalkie_big_nohaplotig	CDS	32266237	32266362	.	+	2	Parent=FBgn0051673.1.mrna1;Target=FBgn0051673.1 749 874 +
ChrX	stalkie_big_nohaplotig	CDS	32266425	32266540	.	+	2	Parent=FBgn0051673.1.mrna1;Target=FBgn0051673.1 875 990 +
ChrX	gffcl	locus	32266616	32270509	.	-	.	ID=RLOC_00001933;geneIDs=FBgn0032891.1.path1;transcripts=FBgn0032891.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32266616	32270509	.	-	.	ID=FBgn0032891.1.mrna1;geneID=FBgn0032891.1.path1;Name=FBgn0032891.1;Dir=sensecoverage=100.0;identity=99.9;matches=2347;mismatches=2;indels=0;unknowns=0;locus=RLOC_00001933
ChrX	stalkie_big_nohaplotig	exon	32266616	32266912	99	-	.	Parent=FBgn0032891.1.mrna1;Target=FBgn0032891.1 2053 2349 +
ChrX	stalkie_big_nohaplotig	exon	32266964	32267255	100	-	.	Parent=FBgn0032891.1.mrna1;Target=FBgn0032891.1 1761 2052 +
ChrX	stalkie_big_nohaplotig	exon	32267316	32267691	100	-	.	Parent=FBgn0032891.1.mrna1;Target=FBgn0032891.1 1385 1760 +
ChrX	stalkie_big_nohaplotig	exon	32268736	32268905	100	-	.	Parent=FBgn0032891.1.mrna1;Target=FBgn0032891.1 1215 1384 +
ChrX	stalkie_big_nohaplotig	exon	32268983	32269362	99	-	.	Parent=FBgn0032891.1.mrna1;Target=FBgn0032891.1 835 1214 +
ChrX	stalkie_big_nohaplotig	exon	32269426	32269653	100	-	.	Parent=FBgn0032891.1.mrna1;Target=FBgn0032891.1 607 834 +
ChrX	stalkie_big_nohaplotig	exon	32269783	32269961	100	-	.	Parent=FBgn0032891.1.mrna1;Target=FBgn0032891.1 428 606 +
ChrX	stalkie_big_nohaplotig	exon	32270026	32270303	100	-	.	Parent=FBgn0032891.1.mrna1;Target=FBgn0032891.1 150 427 +
ChrX	stalkie_big_nohaplotig	exon	32270361	32270509	100	-	.	Parent=FBgn0032891.1.mrna1;Target=FBgn0032891.1 1 149 +
ChrX	stalkie_big_nohaplotig	CDS	32266616	32266912	.	-	0	Parent=FBgn0032891.1.mrna1;Target=FBgn0032891.1 2053 2349 +
ChrX	stalkie_big_nohaplotig	CDS	32266964	32267255	.	-	1	Parent=FBgn0032891.1.mrna1;Target=FBgn0032891.1 1761 2052 +
ChrX	stalkie_big_nohaplotig	CDS	32267316	32267691	.	-	2	Parent=FBgn0032891.1.mrna1;Target=FBgn0032891.1 1385 1760 +
ChrX	stalkie_big_nohaplotig	CDS	32268736	32268905	.	-	1	Parent=FBgn0032891.1.mrna1;Target=FBgn0032891.1 1215 1384 +
ChrX	stalkie_big_nohaplotig	CDS	32268983	32269362	.	-	0	Parent=FBgn0032891.1.mrna1;Target=FBgn0032891.1 835 1214 +
ChrX	stalkie_big_nohaplotig	CDS	32269426	32269653	.	-	0	Parent=FBgn0032891.1.mrna1;Target=FBgn0032891.1 607 834 +
ChrX	stalkie_big_nohaplotig	CDS	32269783	32269961	.	-	2	Parent=FBgn0032891.1.mrna1;Target=FBgn0032891.1 428 606 +
ChrX	stalkie_big_nohaplotig	CDS	32270026	32270303	.	-	1	Parent=FBgn0032891.1.mrna1;Target=FBgn0032891.1 150 427 +
ChrX	stalkie_big_nohaplotig	CDS	32270361	32270509	.	-	0	Parent=FBgn0032891.1.mrna1;Target=FBgn0032891.1 1 149 +
ChrX	gffcl	locus	32283770	32321860	.	+	.	ID=RLOC_00001934;geneIDs=FBgn0051676.1.path1;transcripts=FBgn0051676.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32283770	32321860	.	+	.	ID=FBgn0051676.1.mrna1;geneID=FBgn0051676.1.path1;Name=FBgn0051676.1;Dir=sensecoverage=100.0;identity=100.0;matches=504;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001934
ChrX	stalkie_big_nohaplotig	exon	32283770	32283881	100	+	.	Parent=FBgn0051676.1.mrna1;Target=FBgn0051676.1 1 112 +
ChrX	stalkie_big_nohaplotig	exon	32305993	32306178	100	+	.	Parent=FBgn0051676.1.mrna1;Target=FBgn0051676.1 113 298 +
ChrX	stalkie_big_nohaplotig	exon	32321655	32321860	100	+	.	Parent=FBgn0051676.1.mrna1;Target=FBgn0051676.1 299 504 +
ChrX	stalkie_big_nohaplotig	CDS	32283770	32283881	.	+	0	Parent=FBgn0051676.1.mrna1;Target=FBgn0051676.1 1 112 +
ChrX	stalkie_big_nohaplotig	CDS	32305993	32306178	.	+	2	Parent=FBgn0051676.1.mrna1;Target=FBgn0051676.1 113 298 +
ChrX	stalkie_big_nohaplotig	CDS	32321655	32321860	.	+	2	Parent=FBgn0051676.1.mrna1;Target=FBgn0051676.1 299 504 +
ChrX	gffcl	locus	32321979	32323617	.	+	.	ID=RLOC_00001935;geneIDs=comp160447_c0_seq1.path1;transcripts=comp160447_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32321979	32323617	.	+	.	ID=comp160447_c0_seq1.mrna1;geneID=comp160447_c0_seq1.path1;Name=comp160447_c0_seq1;Dir=indeterminatecoverage=97.0;identity=99.5;matches=1632;mismatches=7;indels=2;unknowns=0;Target=comp160447_c0_seq1 1691 51 .;CDS_Target=comp160447_c0_seq1 243 115 .;locus=RLOC_00001935
ChrX	stalkie_big_nohaplotig	exon	32321979	32323617	99	+	.	Parent=comp160447_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32322043	32322169	.	+	0	Parent=comp160447_c0_seq1.mrna1
ChrX	gffcl	locus	32324320	32324535	.	-	.	ID=RLOC_00001936;geneIDs=comp115886_c0_seq1.path1;transcripts=comp115886_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32324320	32324535	.	-	.	ID=comp115886_c0_seq1.mrna1;geneID=comp115886_c0_seq1.path1;Name=comp115886_c0_seq1;Dir=indeterminatecoverage=78.5;identity=100.0;matches=216;mismatches=0;indels=0;unknowns=0;Target=comp115886_c0_seq1 227 12 .;CDS_Target=comp115886_c0_seq1 117 13 .;locus=RLOC_00001936
ChrX	stalkie_big_nohaplotig	exon	32324320	32324535	100	-	.	Parent=comp115886_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32324430	32324534	.	-	0	Parent=comp115886_c0_seq1.mrna1
ChrX	gffcl	locus	32325756	32326352	.	-	.	ID=RLOC_00001937;geneIDs=FBgn0011206.2.path1;transcripts=FBgn0011206.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32325756	32326352	.	-	.	ID=FBgn0011206.2.mrna1;geneID=FBgn0011206.2.path1;Name=FBgn0011206.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=597;mismatches=0;indels=0;unknowns=0;Target=FBgn0011206.2 597 1 .;locus=RLOC_00001937
ChrX	stalkie_big_nohaplotig	exon	32325756	32326352	100	-	.	Parent=FBgn0011206.2.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32325756	32326352	.	-	0	Parent=FBgn0011206.2.mrna1
ChrX	gffcl	locus	32340832	32366538	.	+	.	ID=RLOC_00001938;geneIDs=FBgn0032895.1.path1;transcripts=FBgn0032895.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32340832	32366538	.	+	.	ID=FBgn0032895.1.mrna1;geneID=FBgn0032895.1.path1;Name=FBgn0032895.1;Dir=sensecoverage=100.0;identity=100.0;matches=495;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001938
ChrX	stalkie_big_nohaplotig	exon	32340832	32340916	100	+	.	Parent=FBgn0032895.1.mrna1;Target=FBgn0032895.1 1 85 +
ChrX	stalkie_big_nohaplotig	exon	32366052	32366252	100	+	.	Parent=FBgn0032895.1.mrna1;Target=FBgn0032895.1 86 286 +
ChrX	stalkie_big_nohaplotig	exon	32366330	32366538	100	+	.	Parent=FBgn0032895.1.mrna1;Target=FBgn0032895.1 287 495 +
ChrX	stalkie_big_nohaplotig	CDS	32340832	32340916	.	+	0	Parent=FBgn0032895.1.mrna1;Target=FBgn0032895.1 1 85 +
ChrX	stalkie_big_nohaplotig	CDS	32366052	32366252	.	+	2	Parent=FBgn0032895.1.mrna1;Target=FBgn0032895.1 86 286 +
ChrX	stalkie_big_nohaplotig	CDS	32366330	32366538	.	+	2	Parent=FBgn0032895.1.mrna1;Target=FBgn0032895.1 287 495 +
ChrX	gffcl	locus	32367703	32368485	.	+	.	ID=RLOC_00001939;geneIDs=comp147799_c0_seq1.path1,comp151158_c0_seq1.path1;transcripts=comp151158_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32368051	32368485	.	+	.	ID=comp151158_c0_seq1.mrna1;geneID=comp151158_c0_seq1.path1;Name=comp151158_c0_seq1;Dir=indeterminatecoverage=98.4;identity=96.4;matches=428;mismatches=7;indels=9;unknowns=0;Target=comp151158_c0_seq1 451 8 .;CDS_Target=comp151158_c0_seq1 53 9 .;locus=RLOC_00001939
ChrX	stalkie_big_nohaplotig	exon	32368051	32368485	96	+	.	Parent=comp151158_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32368052	32368096	.	+	0	Parent=comp151158_c0_seq1.mrna1
ChrX	gffcl	locus	32368800	32370263	.	.	.	ID=RLOC_00001940;geneIDs=comp137570_c0_seq1.path1,comp159322_c0_seq1.path2;transcripts=comp159322_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	32368800	32369960	.	-	.	ID=comp159322_c0_seq1.mrna2;geneID=comp159322_c0_seq1.path2;Name=comp159322_c0_seq1;Dir=indeterminatecoverage=98.5;identity=99.7;matches=1157;mismatches=4;indels=0;unknowns=0;Target=comp159322_c0_seq1 1178 18 .;CDS_Target=comp159322_c0_seq1 305 135 .;locus=RLOC_00001940
ChrX	stalkie_big_nohaplotig	exon	32368800	32369960	99	-	.	Parent=comp159322_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	32369673	32369843	.	-	0	Parent=comp159322_c0_seq1.mrna2
ChrX	gffcl	locus	32377123	32378586	.	.	.	ID=RLOC_00001941;geneIDs=comp137570_c0_seq1.path2,comp159322_c0_seq1.path1;transcripts=comp159322_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32377425	32378586	.	+	.	ID=comp159322_c0_seq1.mrna1;geneID=comp159322_c0_seq1.path1;Name=comp159322_c0_seq1;Dir=indeterminatecoverage=98.6;identity=99.7;matches=1158;mismatches=4;indels=0;unknowns=0;Target=comp159322_c0_seq1 1178 17 .;CDS_Target=comp159322_c0_seq1 305 135 .;locus=RLOC_00001941
ChrX	stalkie_big_nohaplotig	exon	32377425	32378586	99	+	.	Parent=comp159322_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32377543	32377713	.	+	0	Parent=comp159322_c0_seq1.mrna1
ChrX	gffcl	locus	32378901	32379683	.	-	.	ID=RLOC_00001942;geneIDs=comp147799_c0_seq1.path2,comp151158_c0_seq1.path2;transcripts=comp151158_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	32378901	32379335	.	-	.	ID=comp151158_c0_seq1.mrna2;geneID=comp151158_c0_seq1.path2;Name=comp151158_c0_seq1;Dir=indeterminatecoverage=98.4;identity=96.4;matches=428;mismatches=7;indels=9;unknowns=0;Target=comp151158_c0_seq1 451 8 .;CDS_Target=comp151158_c0_seq1 53 9 .;locus=RLOC_00001942
ChrX	stalkie_big_nohaplotig	exon	32378901	32379335	96	-	.	Parent=comp151158_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	32379290	32379334	.	-	0	Parent=comp151158_c0_seq1.mrna2
ChrX	gffcl	locus	32404079	32422489	.	+	.	ID=RLOC_00001943;geneIDs=FBgn0032897.1.path1;transcripts=FBgn0032897.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32404079	32422489	.	+	.	ID=FBgn0032897.1.mrna1;geneID=FBgn0032897.1.path1;Name=FBgn0032897.1;Dir=sensecoverage=100.0;identity=100.0;matches=471;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001943
ChrX	stalkie_big_nohaplotig	exon	32404079	32404095	100	+	.	Parent=FBgn0032897.1.mrna1;Target=FBgn0032897.1 1 17 +
ChrX	stalkie_big_nohaplotig	exon	32404365	32404432	100	+	.	Parent=FBgn0032897.1.mrna1;Target=FBgn0032897.1 18 85 +
ChrX	stalkie_big_nohaplotig	exon	32409846	32410025	100	+	.	Parent=FBgn0032897.1.mrna1;Target=FBgn0032897.1 86 265 +
ChrX	stalkie_big_nohaplotig	exon	32422284	32422489	100	+	.	Parent=FBgn0032897.1.mrna1;Target=FBgn0032897.1 266 471 +
ChrX	stalkie_big_nohaplotig	CDS	32404079	32404095	.	+	0	Parent=FBgn0032897.1.mrna1;Target=FBgn0032897.1 1 17 +
ChrX	stalkie_big_nohaplotig	CDS	32404365	32404432	.	+	1	Parent=FBgn0032897.1.mrna1;Target=FBgn0032897.1 18 85 +
ChrX	stalkie_big_nohaplotig	CDS	32409846	32410025	.	+	2	Parent=FBgn0032897.1.mrna1;Target=FBgn0032897.1 86 265 +
ChrX	stalkie_big_nohaplotig	CDS	32422284	32422489	.	+	2	Parent=FBgn0032897.1.mrna1;Target=FBgn0032897.1 266 471 +
ChrX	gffcl	locus	32421703	32421965	.	+	.	ID=RLOC_00001944;geneIDs=comp149919_c0_seq1.path1;transcripts=comp149919_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32421703	32421965	.	+	.	ID=comp149919_c0_seq1.mrna1;geneID=comp149919_c0_seq1.path1;Name=comp149919_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=261;mismatches=2;indels=0;unknowns=0;Target=comp149919_c0_seq1 263 1 .;CDS_Target=comp149919_c0_seq1 39 1 .;locus=RLOC_00001944
ChrX	stalkie_big_nohaplotig	exon	32421703	32421965	99	+	.	Parent=comp149919_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32421703	32421741	.	+	0	Parent=comp149919_c0_seq1.mrna1
ChrX	gffcl	locus	32428486	32433788	.	+	.	ID=RLOC_00001945;geneIDs=FBgn0051675.1.path1;transcripts=FBgn0051675.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32428486	32433788	.	+	.	ID=FBgn0051675.1.mrna1;geneID=FBgn0051675.1.path1;Name=FBgn0051675.1;Dir=sensecoverage=100.0;identity=100.0;matches=519;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001945
ChrX	stalkie_big_nohaplotig	exon	32428486	32428594	100	+	.	Parent=FBgn0051675.1.mrna1;Target=FBgn0051675.1 1 109 +
ChrX	stalkie_big_nohaplotig	exon	32429428	32429604	100	+	.	Parent=FBgn0051675.1.mrna1;Target=FBgn0051675.1 110 286 +
ChrX	stalkie_big_nohaplotig	exon	32433556	32433788	100	+	.	Parent=FBgn0051675.1.mrna1;Target=FBgn0051675.1 287 519 +
ChrX	stalkie_big_nohaplotig	CDS	32428486	32428594	.	+	0	Parent=FBgn0051675.1.mrna1;Target=FBgn0051675.1 1 109 +
ChrX	stalkie_big_nohaplotig	CDS	32429428	32429604	.	+	2	Parent=FBgn0051675.1.mrna1;Target=FBgn0051675.1 110 286 +
ChrX	stalkie_big_nohaplotig	CDS	32433556	32433788	.	+	2	Parent=FBgn0051675.1.mrna1;Target=FBgn0051675.1 287 519 +
ChrX	gffcl	locus	32440224	32440997	.	+	.	ID=RLOC_00001946;geneIDs=comp152100_c0_seq1.path1;transcripts=comp152100_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32440224	32440997	.	+	.	ID=comp152100_c0_seq1.mrna1;geneID=comp152100_c0_seq1.path1;Name=comp152100_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.2;matches=619;mismatches=3;indels=2;unknowns=0;Target=comp152100_c0_seq1 277 185 .;locus=RLOC_00001946
ChrX	stalkie_big_nohaplotig	exon	32440224	32440368	100	+	.	Parent=comp152100_c0_seq1.mrna1;Target=comp152100_c0_seq1 150 6 .
ChrX	stalkie_big_nohaplotig	exon	32440521	32440997	98	+	.	Parent=comp152100_c0_seq1.mrna1;Target=comp152100_c0_seq1 629 151 .
ChrX	stalkie_big_nohaplotig	CDS	32440555	32440645	.	+	0	Parent=comp152100_c0_seq1.mrna1
ChrX	gffcl	locus	32441233	32441486	.	-	.	ID=RLOC_00001947;geneIDs=comp118245_c0_seq1.path1;transcripts=comp118245_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32441233	32441486	.	-	.	ID=comp118245_c0_seq1.mrna1;geneID=comp118245_c0_seq1.path1;Name=comp118245_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=253;mismatches=1;indels=1;unknowns=0;Target=comp118245_c0_seq1 255 1 .;CDS_Target=comp118245_c0_seq1 225 169 .;locus=RLOC_00001947
ChrX	stalkie_big_nohaplotig	exon	32441233	32441486	99	-	.	Parent=comp118245_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32441263	32441319	.	-	0	Parent=comp118245_c0_seq1.mrna1
ChrX	gffcl	locus	32441820	32442160	.	-	.	ID=RLOC_00001948;geneIDs=comp118277_c0_seq1.path1;transcripts=comp118277_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32441820	32442160	.	-	.	ID=comp118277_c0_seq1.mrna1;geneID=comp118277_c0_seq1.path1;Name=comp118277_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=340;mismatches=0;indels=1;unknowns=0;Target=comp118277_c0_seq1 340 1 .;CDS_Target=comp118277_c0_seq1 273 184 .;locus=RLOC_00001948
ChrX	stalkie_big_nohaplotig	exon	32441820	32442160	99	-	.	Parent=comp118277_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32441887	32441976	.	-	0	Parent=comp118277_c0_seq1.mrna1
ChrX	gffcl	locus	32442189	32442509	.	+	.	ID=RLOC_00001949;geneIDs=comp140174_c0_seq1.path1;transcripts=comp140174_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32442189	32442509	.	+	.	ID=comp140174_c0_seq1.mrna1;geneID=comp140174_c0_seq1.path1;Name=comp140174_c0_seq1;Dir=indeterminatecoverage=97.6;identity=100.0;matches=321;mismatches=0;indels=0;unknowns=0;Target=comp140174_c0_seq1 321 1 .;CDS_Target=comp140174_c0_seq1 158 105 .;locus=RLOC_00001949
ChrX	stalkie_big_nohaplotig	exon	32442189	32442509	100	+	.	Parent=comp140174_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32442293	32442346	.	+	0	Parent=comp140174_c0_seq1.mrna1
ChrX	gffcl	locus	32444873	32445407	.	+	.	ID=RLOC_00001950;geneIDs=comp150592_c0_seq1.path1;transcripts=comp150592_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32444873	32445407	.	+	.	ID=comp150592_c0_seq1.mrna1;geneID=comp150592_c0_seq1.path1;Name=comp150592_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=535;mismatches=0;indels=2;unknowns=0;Target=comp150592_c0_seq1 537 1 .;CDS_Target=comp150592_c0_seq1 468 406 .;locus=RLOC_00001950
ChrX	stalkie_big_nohaplotig	exon	32444873	32445407	99	+	.	Parent=comp150592_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32445276	32445338	.	+	0	Parent=comp150592_c0_seq1.mrna1
ChrX	gffcl	locus	32448758	32542981	.	-	.	ID=RLOC_00001951;geneIDs=FBgn0032901.1.path1;transcripts=FBgn0032901.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32448758	32542981	.	-	.	ID=FBgn0032901.1.mrna1;geneID=FBgn0032901.1.path1;Name=FBgn0032901.1;Dir=sensecoverage=100.0;identity=100.0;matches=1716;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001951
ChrX	stalkie_big_nohaplotig	exon	32448758	32448896	100	-	.	Parent=FBgn0032901.1.mrna1;Target=FBgn0032901.1 1578 1716 +
ChrX	stalkie_big_nohaplotig	exon	32448972	32449192	100	-	.	Parent=FBgn0032901.1.mrna1;Target=FBgn0032901.1 1357 1577 +
ChrX	stalkie_big_nohaplotig	exon	32450768	32450926	100	-	.	Parent=FBgn0032901.1.mrna1;Target=FBgn0032901.1 1198 1356 +
ChrX	stalkie_big_nohaplotig	exon	32460836	32461010	100	-	.	Parent=FBgn0032901.1.mrna1;Target=FBgn0032901.1 1023 1197 +
ChrX	stalkie_big_nohaplotig	exon	32461085	32461413	100	-	.	Parent=FBgn0032901.1.mrna1;Target=FBgn0032901.1 694 1022 +
ChrX	stalkie_big_nohaplotig	exon	32461490	32461614	100	-	.	Parent=FBgn0032901.1.mrna1;Target=FBgn0032901.1 569 693 +
ChrX	stalkie_big_nohaplotig	exon	32482029	32482233	100	-	.	Parent=FBgn0032901.1.mrna1;Target=FBgn0032901.1 364 568 +
ChrX	stalkie_big_nohaplotig	exon	32482322	32482524	100	-	.	Parent=FBgn0032901.1.mrna1;Target=FBgn0032901.1 161 363 +
ChrX	stalkie_big_nohaplotig	exon	32542822	32542981	100	-	.	Parent=FBgn0032901.1.mrna1;Target=FBgn0032901.1 1 160 +
ChrX	stalkie_big_nohaplotig	CDS	32448758	32448896	.	-	1	Parent=FBgn0032901.1.mrna1;Target=FBgn0032901.1 1578 1716 +
ChrX	stalkie_big_nohaplotig	CDS	32448972	32449192	.	-	0	Parent=FBgn0032901.1.mrna1;Target=FBgn0032901.1 1357 1577 +
ChrX	stalkie_big_nohaplotig	CDS	32450768	32450926	.	-	0	Parent=FBgn0032901.1.mrna1;Target=FBgn0032901.1 1198 1356 +
ChrX	stalkie_big_nohaplotig	CDS	32460836	32461010	.	-	1	Parent=FBgn0032901.1.mrna1;Target=FBgn0032901.1 1023 1197 +
ChrX	stalkie_big_nohaplotig	CDS	32461085	32461413	.	-	0	Parent=FBgn0032901.1.mrna1;Target=FBgn0032901.1 694 1022 +
ChrX	stalkie_big_nohaplotig	CDS	32461490	32461614	.	-	2	Parent=FBgn0032901.1.mrna1;Target=FBgn0032901.1 569 693 +
ChrX	stalkie_big_nohaplotig	CDS	32482029	32482233	.	-	0	Parent=FBgn0032901.1.mrna1;Target=FBgn0032901.1 364 568 +
ChrX	stalkie_big_nohaplotig	CDS	32482322	32482524	.	-	2	Parent=FBgn0032901.1.mrna1;Target=FBgn0032901.1 161 363 +
ChrX	stalkie_big_nohaplotig	CDS	32542822	32542981	.	-	0	Parent=FBgn0032901.1.mrna1;Target=FBgn0032901.1 1 160 +
ChrX	gffcl	locus	32611586	32623346	.	-	.	ID=RLOC_00001952;geneIDs=FBgn0032904.1.path1;transcripts=FBgn0032904.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32611586	32623346	.	-	.	ID=FBgn0032904.1.mrna1;geneID=FBgn0032904.1.path1;Name=FBgn0032904.1;Dir=sensecoverage=100.0;identity=100.0;matches=2673;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001952
ChrX	stalkie_big_nohaplotig	exon	32611586	32611727	100	-	.	Parent=FBgn0032904.1.mrna1;Target=FBgn0032904.1 2532 2673 +
ChrX	stalkie_big_nohaplotig	exon	32611789	32611956	100	-	.	Parent=FBgn0032904.1.mrna1;Target=FBgn0032904.1 2364 2531 +
ChrX	stalkie_big_nohaplotig	exon	32612023	32612381	100	-	.	Parent=FBgn0032904.1.mrna1;Target=FBgn0032904.1 2005 2363 +
ChrX	stalkie_big_nohaplotig	exon	32612441	32612592	100	-	.	Parent=FBgn0032904.1.mrna1;Target=FBgn0032904.1 1853 2004 +
ChrX	stalkie_big_nohaplotig	exon	32613648	32614581	100	-	.	Parent=FBgn0032904.1.mrna1;Target=FBgn0032904.1 919 1852 +
ChrX	stalkie_big_nohaplotig	exon	32614638	32614933	100	-	.	Parent=FBgn0032904.1.mrna1;Target=FBgn0032904.1 623 918 +
ChrX	stalkie_big_nohaplotig	exon	32615006	32615527	100	-	.	Parent=FBgn0032904.1.mrna1;Target=FBgn0032904.1 101 622 +
ChrX	stalkie_big_nohaplotig	exon	32623247	32623346	100	-	.	Parent=FBgn0032904.1.mrna1;Target=FBgn0032904.1 1 100 +
ChrX	stalkie_big_nohaplotig	CDS	32611586	32611727	.	-	1	Parent=FBgn0032904.1.mrna1;Target=FBgn0032904.1 2532 2673 +
ChrX	stalkie_big_nohaplotig	CDS	32611789	32611956	.	-	1	Parent=FBgn0032904.1.mrna1;Target=FBgn0032904.1 2364 2531 +
ChrX	stalkie_big_nohaplotig	CDS	32612023	32612381	.	-	0	Parent=FBgn0032904.1.mrna1;Target=FBgn0032904.1 2005 2363 +
ChrX	stalkie_big_nohaplotig	CDS	32612441	32612592	.	-	2	Parent=FBgn0032904.1.mrna1;Target=FBgn0032904.1 1853 2004 +
ChrX	stalkie_big_nohaplotig	CDS	32613648	32614581	.	-	0	Parent=FBgn0032904.1.mrna1;Target=FBgn0032904.1 919 1852 +
ChrX	stalkie_big_nohaplotig	CDS	32614638	32614933	.	-	2	Parent=FBgn0032904.1.mrna1;Target=FBgn0032904.1 623 918 +
ChrX	stalkie_big_nohaplotig	CDS	32615006	32615527	.	-	2	Parent=FBgn0032904.1.mrna1;Target=FBgn0032904.1 101 622 +
ChrX	stalkie_big_nohaplotig	CDS	32623247	32623346	.	-	0	Parent=FBgn0032904.1.mrna1;Target=FBgn0032904.1 1 100 +
ChrX	gffcl	locus	32612930	32613124	.	+	.	ID=RLOC_00001953;geneIDs=comp152041_c0_seq1.path1;transcripts=comp152041_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32612930	32613124	.	+	.	ID=comp152041_c0_seq1.mrna1;geneID=comp152041_c0_seq1.path1;Name=comp152041_c0_seq1;Dir=indeterminatecoverage=27.9;identity=100.0;matches=195;mismatches=0;indels=0;unknowns=0;Target=comp152041_c0_seq1 195 1 .;CDS_Target=comp152041_c0_seq1 195 187 .;locus=RLOC_00001953
ChrX	stalkie_big_nohaplotig	exon	32612930	32613124	100	+	.	Parent=comp152041_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32613116	32613124	.	+	0	Parent=comp152041_c0_seq1.mrna1
ChrX	gffcl	locus	32625564	32626914	.	+	.	ID=RLOC_00001954;geneIDs=comp153908_c0_seq1.path1;transcripts=comp153908_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32625564	32626914	.	+	.	ID=comp153908_c0_seq1.mrna1;geneID=comp153908_c0_seq1.path1;Name=comp153908_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=1057;mismatches=3;indels=0;unknowns=0;Target=comp153908_c0_seq1 81 254 +;locus=RLOC_00001954
ChrX	stalkie_big_nohaplotig	exon	32625564	32625822	100	+	.	Parent=comp153908_c0_seq1.mrna1;Target=comp153908_c0_seq1 1 259 +
ChrX	stalkie_big_nohaplotig	exon	32626051	32626436	100	+	.	Parent=comp153908_c0_seq1.mrna1;Target=comp153908_c0_seq1 260 645 +
ChrX	stalkie_big_nohaplotig	exon	32626500	32626914	99	+	.	Parent=comp153908_c0_seq1.mrna1;Target=comp153908_c0_seq1 646 1060 +
ChrX	stalkie_big_nohaplotig	CDS	32625644	32625817	.	+	0	Parent=comp153908_c0_seq1.mrna1
ChrX	gffcl	locus	32629252	32631051	.	-	.	ID=RLOC_00001955;geneIDs=FBgn0028487.1.path1;transcripts=FBgn0028487.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32629252	32631051	.	-	.	ID=FBgn0028487.1.mrna1;geneID=FBgn0028487.1.path1;Name=FBgn0028487.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1800;mismatches=0;indels=0;unknowns=0;Target=FBgn0028487.1 1800 1 .;locus=RLOC_00001955
ChrX	stalkie_big_nohaplotig	exon	32629252	32631051	100	-	.	Parent=FBgn0028487.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32629252	32631051	.	-	0	Parent=FBgn0028487.1.mrna1
ChrX	gffcl	locus	32703465	32707144	.	.	.	ID=RLOC_00001956;geneIDs=comp143046_c0_seq1.path1,comp154510_c0_seq1.path1,comp543599_c0_seq1.path1;transcripts=comp143046_c0_seq1.mrna1,comp543599_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32703465	32705265	.	-	.	ID=comp143046_c0_seq1.mrna1;geneID=comp143046_c0_seq1.path1;Name=comp143046_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=1432;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001956
ChrX	stalkie_big_nohaplotig	exon	32703465	32704001	100	-	.	Parent=comp143046_c0_seq1.mrna1;Target=comp143046_c0_seq1 1 537 -
ChrX	stalkie_big_nohaplotig	exon	32704179	32704447	100	-	.	Parent=comp143046_c0_seq1.mrna1;Target=comp143046_c0_seq1 538 806 -
ChrX	stalkie_big_nohaplotig	exon	32704639	32705265	99	-	.	Parent=comp143046_c0_seq1.mrna1;Target=comp143046_c0_seq1 807 1433 -
ChrX	stalkie_big_nohaplotig	CDS	32703906	32704001	.	-	0	Parent=comp143046_c0_seq1.mrna1;Target=comp143046_c0_seq1 442 537 .
ChrX	stalkie_big_nohaplotig	CDS	32704179	32704211	.	-	0	Parent=comp143046_c0_seq1.mrna1;Target=comp143046_c0_seq1 538 570 .
ChrX	stalkie_big_nohaplotig	mRNA	32704424	32704662	.	-	.	ID=comp543599_c0_seq1.mrna1;geneID=comp543599_c0_seq1.path1;Name=comp543599_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=239;mismatches=0;indels=0;unknowns=0;Target=comp543599_c0_seq1 239 1 .;CDS_Target=comp543599_c0_seq1 238 80 .;locus=RLOC_00001956
ChrX	stalkie_big_nohaplotig	exon	32704424	32704662	100	-	.	Parent=comp543599_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32704425	32704583	.	-	0	Parent=comp543599_c0_seq1.mrna1
ChrX	gffcl	locus	32707524	32707990	.	-	.	ID=RLOC_00001957;geneIDs=comp490265_c0_seq1.path1;transcripts=comp490265_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32707524	32707990	.	-	.	ID=comp490265_c0_seq1.mrna1;geneID=comp490265_c0_seq1.path1;Name=comp490265_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=464;mismatches=3;indels=0;unknowns=0;Target=comp490265_c0_seq1 467 1 .;CDS_Target=comp490265_c0_seq1 123 55 .;locus=RLOC_00001957
ChrX	stalkie_big_nohaplotig	exon	32707524	32707990	99	-	.	Parent=comp490265_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32707868	32707936	.	-	0	Parent=comp490265_c0_seq1.mrna1
ChrX	gffcl	locus	32708588	32709631	.	+	.	ID=RLOC_00001958;geneIDs=comp159100_c4_seq1.path1;transcripts=comp159100_c4_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32708588	32709631	.	+	.	ID=comp159100_c4_seq1.mrna1;geneID=comp159100_c4_seq1.path1;Name=comp159100_c4_seq1;Dir=indeterminatecoverage=95.6;identity=98.7;matches=1030;mismatches=13;indels=1;unknowns=0;Target=comp159100_c4_seq1 1072 30 .;CDS_Target=comp159100_c4_seq1 91 32 .;locus=RLOC_00001958
ChrX	stalkie_big_nohaplotig	exon	32708588	32709631	98	+	.	Parent=comp159100_c4_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32708590	32708650	.	+	0	Parent=comp159100_c4_seq1.mrna1
ChrX	gffcl	locus	32709958	32710456	.	+	.	ID=RLOC_00001959;geneIDs=comp99358_c0_seq1.path1;transcripts=comp99358_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32709958	32710456	.	+	.	ID=comp99358_c0_seq1.mrna1;geneID=comp99358_c0_seq1.path1;Name=comp99358_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=499;mismatches=0;indels=0;unknowns=0;Target=comp99358_c0_seq1 499 1 .;CDS_Target=comp99358_c0_seq1 165 58 .;locus=RLOC_00001959
ChrX	stalkie_big_nohaplotig	exon	32709958	32710456	100	+	.	Parent=comp99358_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32710015	32710122	.	+	0	Parent=comp99358_c0_seq1.mrna1
ChrX	gffcl	locus	32711897	33842763	.	-	.	ID=RLOC_00001960;geneIDs=comp142827_c0_seq1.path1,comp157113_c1_seq1.path1;transcripts=comp157113_c1_seq1.mrna1,comp142827_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32711897	32822612	.	-	.	ID=comp157113_c1_seq1.mrna1;geneID=comp157113_c1_seq1.path1;Name=comp157113_c1_seq1;Dir=sensecoverage=99.9;identity=100.0;matches=1855;mismatches=0;indels=0;unknowns=0;Target=comp157113_c1_seq1 1118 1219 +;locus=RLOC_00001960
ChrX	stalkie_big_nohaplotig	exon	32711897	32712026	100	-	.	Parent=comp157113_c1_seq1.mrna1;Target=comp157113_c1_seq1 1727 1856 +
ChrX	stalkie_big_nohaplotig	exon	32714176	32714558	100	-	.	Parent=comp157113_c1_seq1.mrna1;Target=comp157113_c1_seq1 1344 1726 +
ChrX	stalkie_big_nohaplotig	exon	32752026	32752049	100	-	.	Parent=comp157113_c1_seq1.mrna1;Target=comp157113_c1_seq1 1320 1343 +
ChrX	stalkie_big_nohaplotig	exon	32794612	32794671	100	-	.	Parent=comp157113_c1_seq1.mrna1;Target=comp157113_c1_seq1 1260 1319 +
ChrX	stalkie_big_nohaplotig	exon	32821355	32822612	100	-	.	Parent=comp157113_c1_seq1.mrna1;Target=comp157113_c1_seq1 2 1259 +
ChrX	stalkie_big_nohaplotig	CDS	32821395	32821496	.	-	0	Parent=comp157113_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32746359	33842763	.	-	.	ID=comp142827_c0_seq1.mrna1;geneID=comp142827_c0_seq1.path1;Name=comp142827_c0_seq1;Dir=sensecoverage=81.8;identity=95.7;matches=900;mismatches=24;indels=16;unknowns=0;locus=RLOC_00001960
ChrX	stalkie_big_nohaplotig	exon	32746359	32746366	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 1042 1049 +
ChrX	stalkie_big_nohaplotig	exon	32755107	32755115	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 1033 1041 +
ChrX	stalkie_big_nohaplotig	exon	32769751	32769758	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 1025 1032 +
ChrX	stalkie_big_nohaplotig	exon	32774219	32774224	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 1019 1024 +
ChrX	stalkie_big_nohaplotig	exon	32774247	32774249	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 964 966 +
ChrX	stalkie_big_nohaplotig	exon	32775712	32775718	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 957 963 +
ChrX	stalkie_big_nohaplotig	exon	32776903	32776916	64	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 944 956 +
ChrX	stalkie_big_nohaplotig	exon	32780023	32780048	50	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 924 943 +
ChrX	stalkie_big_nohaplotig	exon	32784934	32784939	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 918 923 +
ChrX	stalkie_big_nohaplotig	exon	32789912	32789917	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 912 917 +
ChrX	stalkie_big_nohaplotig	exon	32796881	32796883	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 909 911 +
ChrX	stalkie_big_nohaplotig	exon	32801095	32801098	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 905 908 +
ChrX	stalkie_big_nohaplotig	exon	32807217	32807224	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 897 904 +
ChrX	stalkie_big_nohaplotig	exon	32809575	32809583	88	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 888 896 +
ChrX	stalkie_big_nohaplotig	exon	32821925	32821926	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 886 887 +
ChrX	stalkie_big_nohaplotig	exon	32843938	32843944	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 879 885 +
ChrX	stalkie_big_nohaplotig	exon	32868493	32868498	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 873 878 +
ChrX	stalkie_big_nohaplotig	exon	32873517	32873519	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 870 872 +
ChrX	stalkie_big_nohaplotig	exon	32880013	32880022	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 860 869 +
ChrX	stalkie_big_nohaplotig	exon	32882491	32882515	80	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 835 859 +
ChrX	stalkie_big_nohaplotig	exon	32884995	32885004	80	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 825 834 +
ChrX	stalkie_big_nohaplotig	exon	32888679	32888682	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 821 824 +
ChrX	stalkie_big_nohaplotig	exon	32893360	32893361	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 819 820 +
ChrX	stalkie_big_nohaplotig	exon	32895529	32895536	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 811 818 +
ChrX	stalkie_big_nohaplotig	exon	32900246	32900251	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 805 810 +
ChrX	stalkie_big_nohaplotig	exon	32900962	32900964	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 802 804 +
ChrX	stalkie_big_nohaplotig	exon	32906922	32906926	40	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 797 801 +
ChrX	stalkie_big_nohaplotig	exon	32908445	32908456	25	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 794 796 +
ChrX	stalkie_big_nohaplotig	exon	32908828	32908835	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 772 779 +
ChrX	stalkie_big_nohaplotig	exon	32913057	32913068	83	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 760 771 +
ChrX	stalkie_big_nohaplotig	exon	32917156	32917163	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 752 759 +
ChrX	stalkie_big_nohaplotig	exon	32917166	32917173	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 685 692 +
ChrX	stalkie_big_nohaplotig	exon	32919172	32919173	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 683 684 +
ChrX	stalkie_big_nohaplotig	exon	32924843	32924844	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 681 682 +
ChrX	stalkie_big_nohaplotig	exon	32932868	32932873	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 675 680 +
ChrX	stalkie_big_nohaplotig	exon	33842024	33842381	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 317 674 +
ChrX	stalkie_big_nohaplotig	exon	33842448	33842763	100	-	.	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 1 316 +
ChrX	stalkie_big_nohaplotig	CDS	33842200	33842381	.	-	2	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 317 498 +
ChrX	stalkie_big_nohaplotig	CDS	33842448	33842520	.	-	0	Parent=comp142827_c0_seq1.mrna1;Target=comp142827_c0_seq1 244 316 +
ChrX	gffcl	locus	32765604	32774766	.	.	.	ID=RLOC_00001961;geneIDs=comp114964_c0_seq1.path1,comp114964_c0_seq1.path2;transcripts=comp114964_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32765604	32774766	.	-	.	ID=comp114964_c0_seq1.mrna1;geneID=comp114964_c0_seq1.path1;Name=comp114964_c0_seq1;Dir=indeterminatecoverage=61.5;identity=98.9;matches=376;mismatches=3;indels=1;unknowns=0;Target=comp114964_c0_seq1 227 105 .;locus=RLOC_00001961
ChrX	stalkie_big_nohaplotig	exon	32765604	32765607	100	-	.	Parent=comp114964_c0_seq1.mrna1;Target=comp114964_c0_seq1 379 376 .
ChrX	stalkie_big_nohaplotig	exon	32766398	32766400	100	-	.	Parent=comp114964_c0_seq1.mrna1;Target=comp114964_c0_seq1 375 373 .
ChrX	stalkie_big_nohaplotig	exon	32774394	32774766	98	-	.	Parent=comp114964_c0_seq1.mrna1;Target=comp114964_c0_seq1 372 1 .
ChrX	stalkie_big_nohaplotig	CDS	32774540	32774662	.	-	0	Parent=comp114964_c0_seq1.mrna1
ChrX	gffcl	locus	32815775	32816101	.	+	.	ID=RLOC_00001962;geneIDs=comp132788_c1_seq1.path1;transcripts=comp132788_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32815775	32816101	.	+	.	ID=comp132788_c1_seq1.mrna1;geneID=comp132788_c1_seq1.path1;Name=comp132788_c1_seq1;Dir=indeterminatecoverage=99.4;identity=100.0;matches=327;mismatches=0;indels=0;unknowns=0;Target=comp132788_c1_seq1 329 3 .;CDS_Target=comp132788_c1_seq1 134 3 .;locus=RLOC_00001962
ChrX	stalkie_big_nohaplotig	exon	32815775	32816101	100	+	.	Parent=comp132788_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32815775	32815906	.	+	0	Parent=comp132788_c1_seq1.mrna1
ChrX	gffcl	locus	32838674	32848069	.	+	.	ID=RLOC_00001963;geneIDs=FBgn0010395.1.path1;transcripts=FBgn0010395.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32838674	32848069	.	+	.	ID=FBgn0010395.1.mrna1;geneID=FBgn0010395.1.path1;Name=FBgn0010395.1;Dir=sensecoverage=100.0;identity=100.0;matches=2403;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001963
ChrX	stalkie_big_nohaplotig	exon	32838674	32838758	100	+	.	Parent=FBgn0010395.1.mrna1;Target=FBgn0010395.1 1 85 +
ChrX	stalkie_big_nohaplotig	exon	32842584	32842660	100	+	.	Parent=FBgn0010395.1.mrna1;Target=FBgn0010395.1 86 162 +
ChrX	stalkie_big_nohaplotig	exon	32842770	32842959	100	+	.	Parent=FBgn0010395.1.mrna1;Target=FBgn0010395.1 163 352 +
ChrX	stalkie_big_nohaplotig	exon	32845733	32846483	100	+	.	Parent=FBgn0010395.1.mrna1;Target=FBgn0010395.1 353 1103 +
ChrX	stalkie_big_nohaplotig	exon	32846544	32846739	100	+	.	Parent=FBgn0010395.1.mrna1;Target=FBgn0010395.1 1104 1299 +
ChrX	stalkie_big_nohaplotig	exon	32846829	32847004	100	+	.	Parent=FBgn0010395.1.mrna1;Target=FBgn0010395.1 1300 1475 +
ChrX	stalkie_big_nohaplotig	exon	32847069	32847634	100	+	.	Parent=FBgn0010395.1.mrna1;Target=FBgn0010395.1 1476 2041 +
ChrX	stalkie_big_nohaplotig	exon	32847708	32848069	100	+	.	Parent=FBgn0010395.1.mrna1;Target=FBgn0010395.1 2042 2403 +
ChrX	stalkie_big_nohaplotig	CDS	32838674	32838758	.	+	0	Parent=FBgn0010395.1.mrna1;Target=FBgn0010395.1 1 85 +
ChrX	stalkie_big_nohaplotig	CDS	32842584	32842660	.	+	2	Parent=FBgn0010395.1.mrna1;Target=FBgn0010395.1 86 162 +
ChrX	stalkie_big_nohaplotig	CDS	32842770	32842959	.	+	0	Parent=FBgn0010395.1.mrna1;Target=FBgn0010395.1 163 352 +
ChrX	stalkie_big_nohaplotig	CDS	32845733	32846483	.	+	2	Parent=FBgn0010395.1.mrna1;Target=FBgn0010395.1 353 1103 +
ChrX	stalkie_big_nohaplotig	CDS	32846544	32846739	.	+	1	Parent=FBgn0010395.1.mrna1;Target=FBgn0010395.1 1104 1299 +
ChrX	stalkie_big_nohaplotig	CDS	32846829	32847004	.	+	0	Parent=FBgn0010395.1.mrna1;Target=FBgn0010395.1 1300 1475 +
ChrX	stalkie_big_nohaplotig	CDS	32847069	32847634	.	+	1	Parent=FBgn0010395.1.mrna1;Target=FBgn0010395.1 1476 2041 +
ChrX	stalkie_big_nohaplotig	CDS	32847708	32848069	.	+	2	Parent=FBgn0010395.1.mrna1;Target=FBgn0010395.1 2042 2403 +
ChrX	gffcl	locus	32855567	32913327	.	-	.	ID=RLOC_00001964;geneIDs=FBgn0032910.1.path1;transcripts=FBgn0032910.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32855567	32913327	.	-	.	ID=FBgn0032910.1.mrna1;geneID=FBgn0032910.1.path1;Name=FBgn0032910.1;Dir=sensecoverage=100.0;identity=100.0;matches=1248;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001964
ChrX	stalkie_big_nohaplotig	exon	32855567	32855864	100	-	.	Parent=FBgn0032910.1.mrna1;Target=FBgn0032910.1 951 1248 +
ChrX	stalkie_big_nohaplotig	exon	32855924	32856040	100	-	.	Parent=FBgn0032910.1.mrna1;Target=FBgn0032910.1 834 950 +
ChrX	stalkie_big_nohaplotig	exon	32859392	32859513	100	-	.	Parent=FBgn0032910.1.mrna1;Target=FBgn0032910.1 712 833 +
ChrX	stalkie_big_nohaplotig	exon	32859596	32859721	100	-	.	Parent=FBgn0032910.1.mrna1;Target=FBgn0032910.1 586 711 +
ChrX	stalkie_big_nohaplotig	exon	32859821	32859931	100	-	.	Parent=FBgn0032910.1.mrna1;Target=FBgn0032910.1 475 585 +
ChrX	stalkie_big_nohaplotig	exon	32877711	32877835	100	-	.	Parent=FBgn0032910.1.mrna1;Target=FBgn0032910.1 350 474 +
ChrX	stalkie_big_nohaplotig	exon	32877895	32878048	100	-	.	Parent=FBgn0032910.1.mrna1;Target=FBgn0032910.1 196 349 +
ChrX	stalkie_big_nohaplotig	exon	32913133	32913327	100	-	.	Parent=FBgn0032910.1.mrna1;Target=FBgn0032910.1 1 195 +
ChrX	stalkie_big_nohaplotig	CDS	32855567	32855864	.	-	1	Parent=FBgn0032910.1.mrna1;Target=FBgn0032910.1 951 1248 +
ChrX	stalkie_big_nohaplotig	CDS	32855924	32856040	.	-	1	Parent=FBgn0032910.1.mrna1;Target=FBgn0032910.1 834 950 +
ChrX	stalkie_big_nohaplotig	CDS	32859392	32859513	.	-	0	Parent=FBgn0032910.1.mrna1;Target=FBgn0032910.1 712 833 +
ChrX	stalkie_big_nohaplotig	CDS	32859596	32859721	.	-	0	Parent=FBgn0032910.1.mrna1;Target=FBgn0032910.1 586 711 +
ChrX	stalkie_big_nohaplotig	CDS	32859821	32859931	.	-	0	Parent=FBgn0032910.1.mrna1;Target=FBgn0032910.1 475 585 +
ChrX	stalkie_big_nohaplotig	CDS	32877711	32877835	.	-	2	Parent=FBgn0032910.1.mrna1;Target=FBgn0032910.1 350 474 +
ChrX	stalkie_big_nohaplotig	CDS	32877895	32878048	.	-	0	Parent=FBgn0032910.1.mrna1;Target=FBgn0032910.1 196 349 +
ChrX	stalkie_big_nohaplotig	CDS	32913133	32913327	.	-	0	Parent=FBgn0032910.1.mrna1;Target=FBgn0032910.1 1 195 +
ChrX	gffcl	locus	32913553	32914462	.	-	.	ID=RLOC_00001965;geneIDs=comp143592_c0_seq1.path1;transcripts=comp143592_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32913553	32914462	.	-	.	ID=comp143592_c0_seq1.mrna1;geneID=comp143592_c0_seq1.path1;Name=comp143592_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.7;matches=908;mismatches=2;indels=1;unknowns=0;Target=comp143592_c0_seq1 915 5 .;CDS_Target=comp143592_c0_seq1 164 6 .;locus=RLOC_00001965
ChrX	stalkie_big_nohaplotig	exon	32913553	32914462	99	-	.	Parent=comp143592_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32914303	32914461	.	-	0	Parent=comp143592_c0_seq1.mrna1
ChrX	gffcl	locus	32953369	32954256	.	-	.	ID=RLOC_00001966;geneIDs=comp152304_c0_seq1.path1;transcripts=comp152304_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32953369	32954256	.	-	.	ID=comp152304_c0_seq1.mrna1;geneID=comp152304_c0_seq1.path1;Name=comp152304_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.2;matches=881;mismatches=7;indels=0;unknowns=0;Target=comp152304_c0_seq1 888 1 .;CDS_Target=comp152304_c0_seq1 359 240 .;locus=RLOC_00001966
ChrX	stalkie_big_nohaplotig	exon	32953369	32954256	99	-	.	Parent=comp152304_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32953898	32954017	.	-	0	Parent=comp152304_c0_seq1.mrna1
ChrX	gffcl	locus	32956547	32957434	.	+	.	ID=RLOC_00001967;geneIDs=comp152304_c0_seq1.path2;transcripts=comp152304_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	32956547	32957434	.	+	.	ID=comp152304_c0_seq1.mrna2;geneID=comp152304_c0_seq1.path2;Name=comp152304_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.2;matches=881;mismatches=7;indels=0;unknowns=0;Target=comp152304_c0_seq1 888 1 .;CDS_Target=comp152304_c0_seq1 359 240 .;locus=RLOC_00001967
ChrX	stalkie_big_nohaplotig	exon	32956547	32957434	99	+	.	Parent=comp152304_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	32956786	32956905	.	+	0	Parent=comp152304_c0_seq1.mrna2
ChrX	gffcl	locus	32959898	32960307	.	+	.	ID=RLOC_00001968;geneIDs=comp135243_c0_seq1.path1;transcripts=comp135243_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32959898	32960307	.	+	.	ID=comp135243_c0_seq1.mrna1;geneID=comp135243_c0_seq1.path1;Name=comp135243_c0_seq1;Dir=indeterminatecoverage=96.2;identity=98.8;matches=405;mismatches=4;indels=1;unknowns=0;Target=comp135243_c0_seq1 425 17 .;CDS_Target=comp135243_c0_seq1 122 18 .;locus=RLOC_00001968
ChrX	stalkie_big_nohaplotig	exon	32959898	32960307	98	+	.	Parent=comp135243_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	32959899	32960003	.	+	0	Parent=comp135243_c0_seq1.mrna1
ChrX	gffcl	locus	32960816	34556961	.	.	.	ID=RLOC_00001969;geneIDs=FBgn0032911.1.path1,comp47766_c0_seq1.path1,comp120767_c0_seq1.path1,comp158001_c0_seq1.path1,comp160908_c0_seq1.path1;transcripts=FBgn0032911.1.mrna1,comp160908_c0_seq1.mrna1,comp158001_c0_seq1.mrna1,comp120767_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32960816	32984142	.	+	.	ID=FBgn0032911.1.mrna1;geneID=FBgn0032911.1.path1;Name=FBgn0032911.1;Dir=sensecoverage=100.0;identity=100.0;matches=2031;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001969
ChrX	stalkie_big_nohaplotig	exon	32960816	32960871	100	+	.	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 1 56 +
ChrX	stalkie_big_nohaplotig	exon	32978194	32978339	100	+	.	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 57 202 +
ChrX	stalkie_big_nohaplotig	exon	32978464	32978658	100	+	.	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 203 397 +
ChrX	stalkie_big_nohaplotig	exon	32978768	32978859	100	+	.	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 398 489 +
ChrX	stalkie_big_nohaplotig	exon	32979017	32979151	100	+	.	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 490 624 +
ChrX	stalkie_big_nohaplotig	exon	32981000	32981157	100	+	.	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 625 782 +
ChrX	stalkie_big_nohaplotig	exon	32981231	32981475	100	+	.	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 783 1027 +
ChrX	stalkie_big_nohaplotig	exon	32981533	32981673	100	+	.	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 1028 1168 +
ChrX	stalkie_big_nohaplotig	exon	32981737	32982005	100	+	.	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 1169 1437 +
ChrX	stalkie_big_nohaplotig	exon	32982064	32982162	100	+	.	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 1438 1536 +
ChrX	stalkie_big_nohaplotig	exon	32983592	32983751	100	+	.	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 1537 1696 +
ChrX	stalkie_big_nohaplotig	exon	32983808	32984142	100	+	.	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 1697 2031 +
ChrX	stalkie_big_nohaplotig	CDS	32960816	32960871	.	+	0	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 1 56 +
ChrX	stalkie_big_nohaplotig	CDS	32978194	32978339	.	+	1	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 57 202 +
ChrX	stalkie_big_nohaplotig	CDS	32978464	32978658	.	+	2	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 203 397 +
ChrX	stalkie_big_nohaplotig	CDS	32978768	32978859	.	+	2	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 398 489 +
ChrX	stalkie_big_nohaplotig	CDS	32979017	32979151	.	+	0	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 490 624 +
ChrX	stalkie_big_nohaplotig	CDS	32981000	32981157	.	+	0	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 625 782 +
ChrX	stalkie_big_nohaplotig	CDS	32981231	32981475	.	+	1	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 783 1027 +
ChrX	stalkie_big_nohaplotig	CDS	32981533	32981673	.	+	2	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 1028 1168 +
ChrX	stalkie_big_nohaplotig	CDS	32981737	32982005	.	+	2	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 1169 1437 +
ChrX	stalkie_big_nohaplotig	CDS	32982064	32982162	.	+	0	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 1438 1536 +
ChrX	stalkie_big_nohaplotig	CDS	32983592	32983751	.	+	0	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 1537 1696 +
ChrX	stalkie_big_nohaplotig	CDS	32983808	32984142	.	+	2	Parent=FBgn0032911.1.mrna1;Target=FBgn0032911.1 1697 2031 +
ChrX	stalkie_big_nohaplotig	mRNA	32978194	34556961	.	+	.	ID=comp160908_c0_seq1.mrna1;geneID=comp160908_c0_seq1.path1;Name=comp160908_c0_seq1;Dir=sensecoverage=81.7;identity=99.7;matches=2300;mismatches=0;indels=6;unknowns=0;locus=RLOC_00001969
ChrX	stalkie_big_nohaplotig	exon	32978194	32978339	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 245 390 +
ChrX	stalkie_big_nohaplotig	exon	32978464	32978658	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 391 585 +
ChrX	stalkie_big_nohaplotig	exon	32978768	32978859	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 586 677 +
ChrX	stalkie_big_nohaplotig	exon	32979017	32979151	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 678 812 +
ChrX	stalkie_big_nohaplotig	exon	32981000	32981157	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 813 970 +
ChrX	stalkie_big_nohaplotig	exon	32981231	32981475	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 971 1215 +
ChrX	stalkie_big_nohaplotig	exon	32981533	32981673	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 1216 1356 +
ChrX	stalkie_big_nohaplotig	exon	32981737	32982005	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 1357 1625 +
ChrX	stalkie_big_nohaplotig	exon	32982064	32982162	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 1626 1724 +
ChrX	stalkie_big_nohaplotig	exon	32983592	32983751	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 1725 1884 +
ChrX	stalkie_big_nohaplotig	exon	32983808	32984268	98	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 1885 2339 +
ChrX	stalkie_big_nohaplotig	exon	34394011	34394015	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2340 2344 +
ChrX	stalkie_big_nohaplotig	exon	34400856	34400866	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2345 2355 +
ChrX	stalkie_big_nohaplotig	exon	34401887	34401891	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2362 2366 +
ChrX	stalkie_big_nohaplotig	exon	34405988	34405995	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2367 2374 +
ChrX	stalkie_big_nohaplotig	exon	34413747	34413756	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2375 2384 +
ChrX	stalkie_big_nohaplotig	exon	34417585	34417593	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2393 2401 +
ChrX	stalkie_big_nohaplotig	exon	34419187	34419192	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2407 2412 +
ChrX	stalkie_big_nohaplotig	exon	34419808	34419813	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2413 2418 +
ChrX	stalkie_big_nohaplotig	exon	34424405	34424407	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2419 2421 +
ChrX	stalkie_big_nohaplotig	exon	34430241	34430247	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2422 2428 +
ChrX	stalkie_big_nohaplotig	exon	34435579	34435583	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2429 2433 +
ChrX	stalkie_big_nohaplotig	exon	34440889	34440891	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2434 2436 +
ChrX	stalkie_big_nohaplotig	exon	34447434	34447439	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2437 2442 +
ChrX	stalkie_big_nohaplotig	exon	34455281	34455287	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2443 2449 +
ChrX	stalkie_big_nohaplotig	exon	34458343	34458346	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2450 2453 +
ChrX	stalkie_big_nohaplotig	exon	34462228	34462236	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2454 2462 +
ChrX	stalkie_big_nohaplotig	exon	34468716	34468718	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2464 2466 +
ChrX	stalkie_big_nohaplotig	exon	34470297	34470304	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2467 2474 +
ChrX	stalkie_big_nohaplotig	exon	34485368	34485378	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2475 2485 +
ChrX	stalkie_big_nohaplotig	exon	34490415	34490419	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2490 2494 +
ChrX	stalkie_big_nohaplotig	exon	34494272	34494283	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2495 2506 +
ChrX	stalkie_big_nohaplotig	exon	34499706	34499711	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2514 2519 +
ChrX	stalkie_big_nohaplotig	exon	34506194	34506202	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2520 2528 +
ChrX	stalkie_big_nohaplotig	exon	34506649	34506653	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2529 2533 +
ChrX	stalkie_big_nohaplotig	exon	34528145	34528152	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2534 2541 +
ChrX	stalkie_big_nohaplotig	exon	34533849	34533852	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2542 2545 +
ChrX	stalkie_big_nohaplotig	exon	34539046	34539049	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2546 2549 +
ChrX	stalkie_big_nohaplotig	exon	34544802	34544803	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2550 2551 +
ChrX	stalkie_big_nohaplotig	exon	34550814	34550821	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2552 2559 +
ChrX	stalkie_big_nohaplotig	exon	34550874	34550881	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2608 2615 +
ChrX	stalkie_big_nohaplotig	exon	34556957	34556961	100	+	.	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 2621 2625 +
ChrX	stalkie_big_nohaplotig	CDS	32978195	32978339	.	+	0	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 246 390 +
ChrX	stalkie_big_nohaplotig	CDS	32978464	32978658	.	+	2	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 391 585 +
ChrX	stalkie_big_nohaplotig	CDS	32978768	32978859	.	+	2	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 586 677 +
ChrX	stalkie_big_nohaplotig	CDS	32979017	32979151	.	+	0	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 678 812 +
ChrX	stalkie_big_nohaplotig	CDS	32981000	32981157	.	+	0	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 813 970 +
ChrX	stalkie_big_nohaplotig	CDS	32981231	32981475	.	+	1	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 971 1215 +
ChrX	stalkie_big_nohaplotig	CDS	32981533	32981673	.	+	2	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 1216 1356 +
ChrX	stalkie_big_nohaplotig	CDS	32981737	32982005	.	+	2	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 1357 1625 +
ChrX	stalkie_big_nohaplotig	CDS	32982064	32982162	.	+	0	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 1626 1724 +
ChrX	stalkie_big_nohaplotig	CDS	32983592	32983751	.	+	0	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 1725 1884 +
ChrX	stalkie_big_nohaplotig	CDS	32983808	32984145	.	+	2	Parent=comp160908_c0_seq1.mrna1;Target=comp160908_c0_seq1 1885 2222 +
ChrX	stalkie_big_nohaplotig	mRNA	34435230	34437321	.	+	.	ID=comp158001_c0_seq1.mrna1;geneID=comp158001_c0_seq1.path1;Name=comp158001_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=2076;mismatches=16;indels=1;unknowns=0;Target=comp158001_c0_seq1 2093 1 .;CDS_Target=comp158001_c0_seq1 1597 1292 .;locus=RLOC_00001969
ChrX	stalkie_big_nohaplotig	exon	34435230	34437321	99	+	.	Parent=comp158001_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	34436520	34436825	.	+	0	Parent=comp158001_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34457493	34458505	.	-	.	ID=comp120767_c0_seq1.mrna1;geneID=comp120767_c0_seq1.path1;Name=comp120767_c0_seq1;Dir=indeterminatecoverage=98.9;identity=96.0;matches=1012;mismatches=1;indels=41;unknowns=0;Target=comp120767_c0_seq1 1054 1 .;CDS_Target=comp120767_c0_seq1 484 371 .;locus=RLOC_00001969
ChrX	stalkie_big_nohaplotig	exon	34457493	34458505	96	-	.	Parent=comp120767_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	34458024	34458137	.	-	0	Parent=comp120767_c0_seq1.mrna1
ChrX	gffcl	locus	32989907	32994299	.	+	.	ID=RLOC_00001971;geneIDs=FBgn0053511.1.path1;transcripts=FBgn0053511.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	32989907	32994299	.	+	.	ID=FBgn0053511.1.mrna1;geneID=FBgn0053511.1.path1;Name=FBgn0053511.1;Dir=sensecoverage=100.0;identity=99.9;matches=1298;mismatches=1;indels=0;unknowns=0;locus=RLOC_00001971
ChrX	stalkie_big_nohaplotig	exon	32989907	32990119	100	+	.	Parent=FBgn0053511.1.mrna1;Target=FBgn0053511.1 1 213 +
ChrX	stalkie_big_nohaplotig	exon	32990197	32990347	100	+	.	Parent=FBgn0053511.1.mrna1;Target=FBgn0053511.1 214 364 +
ChrX	stalkie_big_nohaplotig	exon	32993223	32993500	100	+	.	Parent=FBgn0053511.1.mrna1;Target=FBgn0053511.1 365 642 +
ChrX	stalkie_big_nohaplotig	exon	32993643	32994299	99	+	.	Parent=FBgn0053511.1.mrna1;Target=FBgn0053511.1 643 1299 +
ChrX	stalkie_big_nohaplotig	CDS	32989907	32990119	.	+	0	Parent=FBgn0053511.1.mrna1;Target=FBgn0053511.1 1 213 +
ChrX	stalkie_big_nohaplotig	CDS	32990197	32990347	.	+	0	Parent=FBgn0053511.1.mrna1;Target=FBgn0053511.1 214 364 +
ChrX	stalkie_big_nohaplotig	CDS	32993223	32993500	.	+	2	Parent=FBgn0053511.1.mrna1;Target=FBgn0053511.1 365 642 +
ChrX	stalkie_big_nohaplotig	CDS	32993643	32994299	.	+	0	Parent=FBgn0053511.1.mrna1;Target=FBgn0053511.1 643 1299 +
ChrX	gffcl	locus	33004747	33007148	.	+	.	ID=RLOC_00001972;geneIDs=comp153286_c0_seq1.path1;transcripts=comp153286_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33004747	33007148	.	+	.	ID=comp153286_c0_seq1.mrna1;geneID=comp153286_c0_seq1.path1;Name=comp153286_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=863;mismatches=5;indels=0;unknowns=0;locus=RLOC_00001972
ChrX	stalkie_big_nohaplotig	exon	33004747	33004852	100	+	.	Parent=comp153286_c0_seq1.mrna1;Target=comp153286_c0_seq1 763 868 -
ChrX	stalkie_big_nohaplotig	exon	33005803	33005954	100	+	.	Parent=comp153286_c0_seq1.mrna1;Target=comp153286_c0_seq1 611 762 -
ChrX	stalkie_big_nohaplotig	exon	33006539	33007148	99	+	.	Parent=comp153286_c0_seq1.mrna1;Target=comp153286_c0_seq1 1 610 -
ChrX	stalkie_big_nohaplotig	CDS	33005938	33005954	.	+	0	Parent=comp153286_c0_seq1.mrna1;Target=comp153286_c0_seq1 611 627 .
ChrX	stalkie_big_nohaplotig	CDS	33006539	33007082	.	+	1	Parent=comp153286_c0_seq1.mrna1;Target=comp153286_c0_seq1 67 610 .
ChrX	gffcl	locus	33020754	33022097	.	+	.	ID=RLOC_00001973;geneIDs=FBgn0032913.1.path1;transcripts=FBgn0032913.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33020754	33022097	.	+	.	ID=FBgn0032913.1.mrna1;geneID=FBgn0032913.1.path1;Name=FBgn0032913.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1344;mismatches=0;indels=0;unknowns=0;Target=FBgn0032913.1 1344 1 .;locus=RLOC_00001973
ChrX	stalkie_big_nohaplotig	exon	33020754	33022097	100	+	.	Parent=FBgn0032913.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33020754	33022097	.	+	0	Parent=FBgn0032913.1.mrna1
ChrX	gffcl	locus	33044717	33045108	.	+	.	ID=RLOC_00001974;geneIDs=FBgn0032914.1.path1;transcripts=FBgn0032914.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33044717	33045108	.	+	.	ID=FBgn0032914.1.mrna1;geneID=FBgn0032914.1.path1;Name=FBgn0032914.1;Dir=sensecoverage=97.8;identity=100.0;matches=314;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001974
ChrX	stalkie_big_nohaplotig	exon	33044717	33044937	100	+	.	Parent=FBgn0032914.1.mrna1;Target=FBgn0032914.1 8 228 +
ChrX	stalkie_big_nohaplotig	exon	33045016	33045108	100	+	.	Parent=FBgn0032914.1.mrna1;Target=FBgn0032914.1 229 321 +
ChrX	stalkie_big_nohaplotig	CDS	33044719	33044937	.	+	0	Parent=FBgn0032914.1.mrna1;Target=FBgn0032914.1 10 228 +
ChrX	stalkie_big_nohaplotig	CDS	33045016	33045108	.	+	0	Parent=FBgn0032914.1.mrna1;Target=FBgn0032914.1 229 321 +
ChrX	gffcl	locus	33045648	33046035	.	+	.	ID=RLOC_00001975;geneIDs=comp152301_c0_seq1.path1;transcripts=comp152301_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33045648	33046035	.	+	.	ID=comp152301_c0_seq1.mrna1;geneID=comp152301_c0_seq1.path1;Name=comp152301_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.8;matches=385;mismatches=3;indels=18;unknowns=0;Target=comp152301_c0_seq1 406 1 .;CDS_Target=comp152301_c0_seq1 49 2 .;locus=RLOC_00001975
ChrX	stalkie_big_nohaplotig	exon	33045648	33046035	94	+	.	Parent=comp152301_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33045649	33045696	.	+	0	Parent=comp152301_c0_seq1.mrna1
ChrX	gffcl	locus	33050521	33075015	.	-	.	ID=RLOC_00001976;geneIDs=FBgn0032915.1.path1;transcripts=FBgn0032915.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33050521	33075015	.	-	.	ID=FBgn0032915.1.mrna1;geneID=FBgn0032915.1.path1;Name=FBgn0032915.1;Dir=sensecoverage=100.0;identity=100.0;matches=3339;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001976
ChrX	stalkie_big_nohaplotig	exon	33050521	33050988	100	-	.	Parent=FBgn0032915.1.mrna1;Target=FBgn0032915.1 2872 3339 +
ChrX	stalkie_big_nohaplotig	exon	33070395	33070598	100	-	.	Parent=FBgn0032915.1.mrna1;Target=FBgn0032915.1 2668 2871 +
ChrX	stalkie_big_nohaplotig	exon	33070664	33070824	100	-	.	Parent=FBgn0032915.1.mrna1;Target=FBgn0032915.1 2507 2667 +
ChrX	stalkie_big_nohaplotig	exon	33070903	33071044	100	-	.	Parent=FBgn0032915.1.mrna1;Target=FBgn0032915.1 2365 2506 +
ChrX	stalkie_big_nohaplotig	exon	33072286	33073345	100	-	.	Parent=FBgn0032915.1.mrna1;Target=FBgn0032915.1 1305 2364 +
ChrX	stalkie_big_nohaplotig	exon	33073409	33073587	100	-	.	Parent=FBgn0032915.1.mrna1;Target=FBgn0032915.1 1126 1304 +
ChrX	stalkie_big_nohaplotig	exon	33073648	33074058	100	-	.	Parent=FBgn0032915.1.mrna1;Target=FBgn0032915.1 715 1125 +
ChrX	stalkie_big_nohaplotig	exon	33074122	33074254	100	-	.	Parent=FBgn0032915.1.mrna1;Target=FBgn0032915.1 582 714 +
ChrX	stalkie_big_nohaplotig	exon	33074307	33074414	100	-	.	Parent=FBgn0032915.1.mrna1;Target=FBgn0032915.1 474 581 +
ChrX	stalkie_big_nohaplotig	exon	33074485	33074865	100	-	.	Parent=FBgn0032915.1.mrna1;Target=FBgn0032915.1 93 473 +
ChrX	stalkie_big_nohaplotig	exon	33074924	33075015	100	-	.	Parent=FBgn0032915.1.mrna1;Target=FBgn0032915.1 1 92 +
ChrX	stalkie_big_nohaplotig	CDS	33050521	33050988	.	-	0	Parent=FBgn0032915.1.mrna1;Target=FBgn0032915.1 2872 3339 +
ChrX	stalkie_big_nohaplotig	CDS	33070395	33070598	.	-	0	Parent=FBgn0032915.1.mrna1;Target=FBgn0032915.1 2668 2871 +
ChrX	stalkie_big_nohaplotig	CDS	33070664	33070824	.	-	2	Parent=FBgn0032915.1.mrna1;Target=FBgn0032915.1 2507 2667 +
ChrX	stalkie_big_nohaplotig	CDS	33070903	33071044	.	-	0	Parent=FBgn0032915.1.mrna1;Target=FBgn0032915.1 2365 2506 +
ChrX	stalkie_big_nohaplotig	CDS	33072286	33073345	.	-	1	Parent=FBgn0032915.1.mrna1;Target=FBgn0032915.1 1305 2364 +
ChrX	stalkie_big_nohaplotig	CDS	33073409	33073587	.	-	0	Parent=FBgn0032915.1.mrna1;Target=FBgn0032915.1 1126 1304 +
ChrX	stalkie_big_nohaplotig	CDS	33073648	33074058	.	-	0	Parent=FBgn0032915.1.mrna1;Target=FBgn0032915.1 715 1125 +
ChrX	stalkie_big_nohaplotig	CDS	33074122	33074254	.	-	1	Parent=FBgn0032915.1.mrna1;Target=FBgn0032915.1 582 714 +
ChrX	stalkie_big_nohaplotig	CDS	33074307	33074414	.	-	1	Parent=FBgn0032915.1.mrna1;Target=FBgn0032915.1 474 581 +
ChrX	stalkie_big_nohaplotig	CDS	33074485	33074865	.	-	1	Parent=FBgn0032915.1.mrna1;Target=FBgn0032915.1 93 473 +
ChrX	stalkie_big_nohaplotig	CDS	33074924	33075015	.	-	0	Parent=FBgn0032915.1.mrna1;Target=FBgn0032915.1 1 92 +
ChrX	gffcl	locus	33062259	33068175	.	+	.	ID=RLOC_00001977;geneIDs=FBgn0083972.1.path1;transcripts=FBgn0083972.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33062259	33068175	.	+	.	ID=FBgn0083972.1.mrna1;geneID=FBgn0083972.1.path1;Name=FBgn0083972.1;Dir=sensecoverage=99.3;identity=100.0;matches=286;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001977
ChrX	stalkie_big_nohaplotig	exon	33062259	33062400	100	+	.	Parent=FBgn0083972.1.mrna1;Target=FBgn0083972.1 3 144 +
ChrX	stalkie_big_nohaplotig	exon	33068032	33068175	100	+	.	Parent=FBgn0083972.1.mrna1;Target=FBgn0083972.1 145 288 +
ChrX	stalkie_big_nohaplotig	CDS	33062260	33062400	.	+	0	Parent=FBgn0083972.1.mrna1;Target=FBgn0083972.1 4 144 +
ChrX	stalkie_big_nohaplotig	CDS	33068032	33068175	.	+	0	Parent=FBgn0083972.1.mrna1;Target=FBgn0083972.1 145 288 +
ChrX	gffcl	locus	33082544	33083567	.	+	.	ID=RLOC_00001978;geneIDs=FBgn0086355.1.path1;transcripts=FBgn0086355.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33082544	33083567	.	+	.	ID=FBgn0086355.1.mrna1;geneID=FBgn0086355.1.path1;Name=FBgn0086355.1;Dir=sensecoverage=100.0;identity=100.0;matches=891;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001978
ChrX	stalkie_big_nohaplotig	exon	33082544	33082642	100	+	.	Parent=FBgn0086355.1.mrna1;Target=FBgn0086355.1 1 99 +
ChrX	stalkie_big_nohaplotig	exon	33082702	33083289	100	+	.	Parent=FBgn0086355.1.mrna1;Target=FBgn0086355.1 100 687 +
ChrX	stalkie_big_nohaplotig	exon	33083364	33083567	100	+	.	Parent=FBgn0086355.1.mrna1;Target=FBgn0086355.1 688 891 +
ChrX	stalkie_big_nohaplotig	CDS	33082544	33082642	.	+	0	Parent=FBgn0086355.1.mrna1;Target=FBgn0086355.1 1 99 +
ChrX	stalkie_big_nohaplotig	CDS	33082702	33083289	.	+	0	Parent=FBgn0086355.1.mrna1;Target=FBgn0086355.1 100 687 +
ChrX	stalkie_big_nohaplotig	CDS	33083364	33083567	.	+	0	Parent=FBgn0086355.1.mrna1;Target=FBgn0086355.1 688 891 +
ChrX	gffcl	locus	33084607	33085448	.	-	.	ID=RLOC_00001979;geneIDs=comp156003_c0_seq1.path1;transcripts=comp156003_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33084607	33085448	.	-	.	ID=comp156003_c0_seq1.mrna1;geneID=comp156003_c0_seq1.path1;Name=comp156003_c0_seq1;Dir=sensecoverage=95.4;identity=98.6;matches=634;mismatches=6;indels=3;unknowns=0;Target=comp156003_c0_seq1 455 586 +;locus=RLOC_00001979
ChrX	stalkie_big_nohaplotig	exon	33084607	33084950	99	-	.	Parent=comp156003_c0_seq1.mrna1;Target=comp156003_c0_seq1 329 672 +
ChrX	stalkie_big_nohaplotig	exon	33085012	33085218	99	-	.	Parent=comp156003_c0_seq1.mrna1;Target=comp156003_c0_seq1 122 328 +
ChrX	stalkie_big_nohaplotig	exon	33085358	33085448	93	-	.	Parent=comp156003_c0_seq1.mrna1;Target=comp156003_c0_seq1 32 121 +
ChrX	stalkie_big_nohaplotig	CDS	33084693	33084824	.	-	0	Parent=comp156003_c0_seq1.mrna1
ChrX	gffcl	locus	33087666	33088736	.	+	.	ID=RLOC_00001980;geneIDs=FBgn0032916.1.path1;transcripts=FBgn0032916.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33087666	33088736	.	+	.	ID=FBgn0032916.1.mrna1;geneID=FBgn0032916.1.path1;Name=FBgn0032916.1;Dir=sensecoverage=100.0;identity=100.0;matches=1005;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001980
ChrX	stalkie_big_nohaplotig	exon	33087666	33088106	100	+	.	Parent=FBgn0032916.1.mrna1;Target=FBgn0032916.1 1 441 +
ChrX	stalkie_big_nohaplotig	exon	33088173	33088736	100	+	.	Parent=FBgn0032916.1.mrna1;Target=FBgn0032916.1 442 1005 +
ChrX	stalkie_big_nohaplotig	CDS	33087666	33088106	.	+	0	Parent=FBgn0032916.1.mrna1;Target=FBgn0032916.1 1 441 +
ChrX	stalkie_big_nohaplotig	CDS	33088173	33088736	.	+	0	Parent=FBgn0032916.1.mrna1;Target=FBgn0032916.1 442 1005 +
ChrX	gffcl	locus	33089525	33090102	.	+	.	ID=RLOC_00001981;geneIDs=comp118431_c0_seq1.path1;transcripts=comp118431_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33089525	33090102	.	+	.	ID=comp118431_c0_seq1.mrna1;geneID=comp118431_c0_seq1.path1;Name=comp118431_c0_seq1;Dir=indeterminatecoverage=99.3;identity=100.0;matches=578;mismatches=0;indels=0;unknowns=0;Target=comp118431_c0_seq1 581 4 .;CDS_Target=comp118431_c0_seq1 222 4 .;locus=RLOC_00001981
ChrX	stalkie_big_nohaplotig	exon	33089525	33090102	100	+	.	Parent=comp118431_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33089525	33089743	.	+	0	Parent=comp118431_c0_seq1.mrna1
ChrX	gffcl	locus	33095700	33099035	.	-	.	ID=RLOC_00001982;geneIDs=FBgn0010398.1.path1;transcripts=FBgn0010398.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33095700	33099035	.	-	.	ID=FBgn0010398.1.mrna1;geneID=FBgn0010398.1.path1;Name=FBgn0010398.1;Dir=sensecoverage=99.2;identity=99.1;matches=1224;mismatches=11;indels=0;unknowns=0;locus=RLOC_00001982
ChrX	stalkie_big_nohaplotig	exon	33095700	33096362	98	-	.	Parent=FBgn0010398.1.mrna1;Target=FBgn0010398.1 583 1245 +
ChrX	stalkie_big_nohaplotig	exon	33098464	33099035	99	-	.	Parent=FBgn0010398.1.mrna1;Target=FBgn0010398.1 11 582 +
ChrX	stalkie_big_nohaplotig	CDS	33095700	33096362	.	-	0	Parent=FBgn0010398.1.mrna1;Target=FBgn0010398.1 583 1245 +
ChrX	stalkie_big_nohaplotig	CDS	33098464	33099033	.	-	0	Parent=FBgn0010398.1.mrna1;Target=FBgn0010398.1 13 582 +
ChrX	gffcl	locus	33100160	33115527	.	+	.	ID=RLOC_00001983;geneIDs=FBgn0010398.1.path2,comp161588_c1_seq1.path1;transcripts=comp161588_c1_seq1.mrna1,FBgn0010398.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	33100160	33115527	.	+	.	ID=comp161588_c1_seq1.mrna1;geneID=comp161588_c1_seq1.path1;Name=comp161588_c1_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=2161;mismatches=4;indels=0;unknowns=0;locus=RLOC_00001983
ChrX	stalkie_big_nohaplotig	exon	33100160	33100494	99	+	.	Parent=comp161588_c1_seq1.mrna1;Target=comp161588_c1_seq1 1 335 +
ChrX	stalkie_big_nohaplotig	exon	33100579	33101150	99	+	.	Parent=comp161588_c1_seq1.mrna1;Target=comp161588_c1_seq1 336 907 +
ChrX	stalkie_big_nohaplotig	exon	33101220	33101640	100	+	.	Parent=comp161588_c1_seq1.mrna1;Target=comp161588_c1_seq1 908 1328 +
ChrX	stalkie_big_nohaplotig	exon	33103252	33103312	100	+	.	Parent=comp161588_c1_seq1.mrna1;Target=comp161588_c1_seq1 1329 1389 +
ChrX	stalkie_big_nohaplotig	exon	33114752	33115527	99	+	.	Parent=comp161588_c1_seq1.mrna1;Target=comp161588_c1_seq1 1390 2165 +
ChrX	stalkie_big_nohaplotig	CDS	33100579	33101150	.	+	1	Parent=comp161588_c1_seq1.mrna1;Target=comp161588_c1_seq1 336 907 +
ChrX	stalkie_big_nohaplotig	CDS	33101220	33101288	.	+	2	Parent=comp161588_c1_seq1.mrna1;Target=comp161588_c1_seq1 908 976 +
ChrX	stalkie_big_nohaplotig	mRNA	33100579	33103914	.	+	.	ID=FBgn0010398.1.mrna2;geneID=FBgn0010398.1.path2;Name=FBgn0010398.1;Dir=sensecoverage=99.2;identity=99.1;matches=1224;mismatches=11;indels=0;unknowns=0;locus=RLOC_00001983
ChrX	stalkie_big_nohaplotig	exon	33100579	33101150	99	+	.	Parent=FBgn0010398.1.mrna2;Target=FBgn0010398.1 11 582 +
ChrX	stalkie_big_nohaplotig	exon	33103252	33103914	98	+	.	Parent=FBgn0010398.1.mrna2;Target=FBgn0010398.1 583 1245 +
ChrX	stalkie_big_nohaplotig	CDS	33100581	33101150	.	+	0	Parent=FBgn0010398.1.mrna2;Target=FBgn0010398.1 13 582 +
ChrX	stalkie_big_nohaplotig	CDS	33103252	33103914	.	+	0	Parent=FBgn0010398.1.mrna2;Target=FBgn0010398.1 583 1245 +
ChrX	gffcl	locus	33174969	33182078	.	+	.	ID=RLOC_00001984;geneIDs=FBgn0032264.1.path1;transcripts=FBgn0032264.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33174969	33182078	.	+	.	ID=FBgn0032264.1.mrna1;geneID=FBgn0032264.1.path1;Name=FBgn0032264.1;Dir=sensecoverage=100.0;identity=100.0;matches=1464;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001984
ChrX	stalkie_big_nohaplotig	exon	33174969	33175343	100	+	.	Parent=FBgn0032264.1.mrna1;Target=FBgn0032264.1 1 375 +
ChrX	stalkie_big_nohaplotig	exon	33178480	33178657	100	+	.	Parent=FBgn0032264.1.mrna1;Target=FBgn0032264.1 376 553 +
ChrX	stalkie_big_nohaplotig	exon	33181027	33181388	100	+	.	Parent=FBgn0032264.1.mrna1;Target=FBgn0032264.1 554 915 +
ChrX	stalkie_big_nohaplotig	exon	33181456	33181614	100	+	.	Parent=FBgn0032264.1.mrna1;Target=FBgn0032264.1 916 1074 +
ChrX	stalkie_big_nohaplotig	exon	33181689	33182078	100	+	.	Parent=FBgn0032264.1.mrna1;Target=FBgn0032264.1 1075 1464 +
ChrX	stalkie_big_nohaplotig	CDS	33174969	33175343	.	+	0	Parent=FBgn0032264.1.mrna1;Target=FBgn0032264.1 1 375 +
ChrX	stalkie_big_nohaplotig	CDS	33178480	33178657	.	+	0	Parent=FBgn0032264.1.mrna1;Target=FBgn0032264.1 376 553 +
ChrX	stalkie_big_nohaplotig	CDS	33181027	33181388	.	+	2	Parent=FBgn0032264.1.mrna1;Target=FBgn0032264.1 554 915 +
ChrX	stalkie_big_nohaplotig	CDS	33181456	33181614	.	+	0	Parent=FBgn0032264.1.mrna1;Target=FBgn0032264.1 916 1074 +
ChrX	stalkie_big_nohaplotig	CDS	33181689	33182078	.	+	0	Parent=FBgn0032264.1.mrna1;Target=FBgn0032264.1 1075 1464 +
ChrX	gffcl	locus	33221201	33226848	.	+	.	ID=RLOC_00001986;geneIDs=comp161640_c0_seq1.path1;transcripts=comp161640_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33221201	33226848	.	+	.	ID=comp161640_c0_seq1.mrna1;geneID=comp161640_c0_seq1.path1;Name=comp161640_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=784;mismatches=1;indels=0;unknowns=0;Target=comp161640_c0_seq1 1 477 .;locus=RLOC_00001986
ChrX	stalkie_big_nohaplotig	exon	33221201	33221243	100	+	.	Parent=comp161640_c0_seq1.mrna1;Target=comp161640_c0_seq1 743 785 -
ChrX	stalkie_big_nohaplotig	exon	33222279	33222370	100	+	.	Parent=comp161640_c0_seq1.mrna1;Target=comp161640_c0_seq1 651 742 -
ChrX	stalkie_big_nohaplotig	exon	33224789	33224922	100	+	.	Parent=comp161640_c0_seq1.mrna1;Target=comp161640_c0_seq1 517 650 -
ChrX	stalkie_big_nohaplotig	exon	33226333	33226848	99	+	.	Parent=comp161640_c0_seq1.mrna1;Target=comp161640_c0_seq1 1 516 -
ChrX	stalkie_big_nohaplotig	CDS	33226372	33226848	.	+	0	Parent=comp161640_c0_seq1.mrna1
ChrX	gffcl	locus	33234060	33235115	.	+	.	ID=RLOC_00001987;geneIDs=ORF1578.path1;transcripts=ORF1578.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33234060	33235115	.	+	.	ID=ORF1578.mrna1;geneID=ORF1578.path1;Name=ORF1578;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1056;mismatches=0;indels=0;unknowns=0;Target=ORF1578 1056 1 .;locus=RLOC_00001987
ChrX	stalkie_big_nohaplotig	exon	33234060	33235115	100	+	.	Parent=ORF1578.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33234060	33235115	.	+	0	Parent=ORF1578.mrna1
ChrX	gffcl	locus	33239996	33515806	.	+	.	ID=RLOC_00001988;geneIDs=FBgn0051721.1.path1,comp156745_c1_seq1.path1;transcripts=comp156745_c1_seq1.mrna1,FBgn0051721.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33239996	33515806	.	+	.	ID=comp156745_c1_seq1.mrna1;geneID=comp156745_c1_seq1.path1;Name=comp156745_c1_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=2641;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001988
ChrX	stalkie_big_nohaplotig	exon	33239996	33241072	100	+	.	Parent=comp156745_c1_seq1.mrna1;Target=comp156745_c1_seq1 1 1077 +
ChrX	stalkie_big_nohaplotig	exon	33489194	33489289	100	+	.	Parent=comp156745_c1_seq1.mrna1;Target=comp156745_c1_seq1 1078 1173 +
ChrX	stalkie_big_nohaplotig	exon	33492057	33492188	100	+	.	Parent=comp156745_c1_seq1.mrna1;Target=comp156745_c1_seq1 1174 1305 +
ChrX	stalkie_big_nohaplotig	exon	33492450	33492551	100	+	.	Parent=comp156745_c1_seq1.mrna1;Target=comp156745_c1_seq1 1306 1407 +
ChrX	stalkie_big_nohaplotig	exon	33494413	33494572	100	+	.	Parent=comp156745_c1_seq1.mrna1;Target=comp156745_c1_seq1 1408 1567 +
ChrX	stalkie_big_nohaplotig	exon	33498884	33498994	100	+	.	Parent=comp156745_c1_seq1.mrna1;Target=comp156745_c1_seq1 1568 1678 +
ChrX	stalkie_big_nohaplotig	exon	33502653	33502792	100	+	.	Parent=comp156745_c1_seq1.mrna1;Target=comp156745_c1_seq1 1679 1818 +
ChrX	stalkie_big_nohaplotig	exon	33506329	33506467	100	+	.	Parent=comp156745_c1_seq1.mrna1;Target=comp156745_c1_seq1 1819 1957 +
ChrX	stalkie_big_nohaplotig	exon	33509441	33509674	100	+	.	Parent=comp156745_c1_seq1.mrna1;Target=comp156745_c1_seq1 1958 2191 +
ChrX	stalkie_big_nohaplotig	exon	33515357	33515806	100	+	.	Parent=comp156745_c1_seq1.mrna1;Target=comp156745_c1_seq1 2192 2641 +
ChrX	stalkie_big_nohaplotig	CDS	33240122	33241072	.	+	0	Parent=comp156745_c1_seq1.mrna1;Target=comp156745_c1_seq1 127 1077 +
ChrX	stalkie_big_nohaplotig	CDS	33489194	33489289	.	+	0	Parent=comp156745_c1_seq1.mrna1;Target=comp156745_c1_seq1 1078 1173 +
ChrX	stalkie_big_nohaplotig	CDS	33492057	33492188	.	+	0	Parent=comp156745_c1_seq1.mrna1;Target=comp156745_c1_seq1 1174 1305 +
ChrX	stalkie_big_nohaplotig	CDS	33492450	33492551	.	+	0	Parent=comp156745_c1_seq1.mrna1;Target=comp156745_c1_seq1 1306 1407 +
ChrX	stalkie_big_nohaplotig	CDS	33494413	33494572	.	+	0	Parent=comp156745_c1_seq1.mrna1;Target=comp156745_c1_seq1 1408 1567 +
ChrX	stalkie_big_nohaplotig	CDS	33498884	33498994	.	+	2	Parent=comp156745_c1_seq1.mrna1;Target=comp156745_c1_seq1 1568 1678 +
ChrX	stalkie_big_nohaplotig	CDS	33502653	33502792	.	+	2	Parent=comp156745_c1_seq1.mrna1;Target=comp156745_c1_seq1 1679 1818 +
ChrX	stalkie_big_nohaplotig	CDS	33506329	33506467	.	+	0	Parent=comp156745_c1_seq1.mrna1;Target=comp156745_c1_seq1 1819 1957 +
ChrX	stalkie_big_nohaplotig	CDS	33509441	33509674	.	+	2	Parent=comp156745_c1_seq1.mrna1;Target=comp156745_c1_seq1 1958 2191 +
ChrX	stalkie_big_nohaplotig	CDS	33515357	33515646	.	+	2	Parent=comp156745_c1_seq1.mrna1;Target=comp156745_c1_seq1 2192 2481 +
ChrX	stalkie_big_nohaplotig	mRNA	33240059	33515643	.	+	.	ID=FBgn0051721.1.mrna1;geneID=FBgn0051721.1.path1;Name=FBgn0051721.1;Dir=sensecoverage=100.0;identity=100.0;matches=2337;mismatches=0;indels=0;unknowns=0;locus=RLOC_00001988
ChrX	stalkie_big_nohaplotig	exon	33240059	33241072	100	+	.	Parent=FBgn0051721.1.mrna1;Target=FBgn0051721.1 1 1014 +
ChrX	stalkie_big_nohaplotig	exon	33489194	33489289	100	+	.	Parent=FBgn0051721.1.mrna1;Target=FBgn0051721.1 1015 1110 +
ChrX	stalkie_big_nohaplotig	exon	33492057	33492188	100	+	.	Parent=FBgn0051721.1.mrna1;Target=FBgn0051721.1 1111 1242 +
ChrX	stalkie_big_nohaplotig	exon	33492450	33492551	100	+	.	Parent=FBgn0051721.1.mrna1;Target=FBgn0051721.1 1243 1344 +
ChrX	stalkie_big_nohaplotig	exon	33494413	33494572	100	+	.	Parent=FBgn0051721.1.mrna1;Target=FBgn0051721.1 1345 1504 +
ChrX	stalkie_big_nohaplotig	exon	33498884	33498916	100	+	.	Parent=FBgn0051721.1.mrna1;Target=FBgn0051721.1 1505 1537 +
ChrX	stalkie_big_nohaplotig	exon	33502653	33502792	100	+	.	Parent=FBgn0051721.1.mrna1;Target=FBgn0051721.1 1538 1677 +
ChrX	stalkie_big_nohaplotig	exon	33506329	33506467	100	+	.	Parent=FBgn0051721.1.mrna1;Target=FBgn0051721.1 1678 1816 +
ChrX	stalkie_big_nohaplotig	exon	33509441	33509674	100	+	.	Parent=FBgn0051721.1.mrna1;Target=FBgn0051721.1 1817 2050 +
ChrX	stalkie_big_nohaplotig	exon	33515357	33515643	100	+	.	Parent=FBgn0051721.1.mrna1;Target=FBgn0051721.1 2051 2337 +
ChrX	stalkie_big_nohaplotig	CDS	33240059	33241072	.	+	0	Parent=FBgn0051721.1.mrna1;Target=FBgn0051721.1 1 1014 +
ChrX	stalkie_big_nohaplotig	CDS	33489194	33489289	.	+	0	Parent=FBgn0051721.1.mrna1;Target=FBgn0051721.1 1015 1110 +
ChrX	stalkie_big_nohaplotig	CDS	33492057	33492188	.	+	0	Parent=FBgn0051721.1.mrna1;Target=FBgn0051721.1 1111 1242 +
ChrX	stalkie_big_nohaplotig	CDS	33492450	33492551	.	+	0	Parent=FBgn0051721.1.mrna1;Target=FBgn0051721.1 1243 1344 +
ChrX	stalkie_big_nohaplotig	CDS	33494413	33494572	.	+	0	Parent=FBgn0051721.1.mrna1;Target=FBgn0051721.1 1345 1504 +
ChrX	stalkie_big_nohaplotig	CDS	33498884	33498916	.	+	2	Parent=FBgn0051721.1.mrna1;Target=FBgn0051721.1 1505 1537 +
ChrX	stalkie_big_nohaplotig	CDS	33502653	33502792	.	+	2	Parent=FBgn0051721.1.mrna1;Target=FBgn0051721.1 1538 1677 +
ChrX	stalkie_big_nohaplotig	CDS	33506329	33506467	.	+	0	Parent=FBgn0051721.1.mrna1;Target=FBgn0051721.1 1678 1816 +
ChrX	stalkie_big_nohaplotig	CDS	33509441	33509674	.	+	2	Parent=FBgn0051721.1.mrna1;Target=FBgn0051721.1 1817 2050 +
ChrX	stalkie_big_nohaplotig	CDS	33515357	33515643	.	+	2	Parent=FBgn0051721.1.mrna1;Target=FBgn0051721.1 2051 2337 +
ChrX	gffcl	locus	33253759	33254075	.	+	.	ID=RLOC_00001989;geneIDs=comp136997_c0_seq1.path1;transcripts=comp136997_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33253759	33254075	.	+	.	ID=comp136997_c0_seq1.mrna1;geneID=comp136997_c0_seq1.path1;Name=comp136997_c0_seq1;Dir=indeterminatecoverage=100.0;identity=81.2;matches=273;mismatches=44;indels=19;unknowns=0;Target=comp136997_c0_seq1 336 1 .;CDS_Target=comp136997_c0_seq1 264 1 .;locus=RLOC_00001989
ChrX	stalkie_big_nohaplotig	exon	33253759	33254075	81	+	.	Parent=comp136997_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33253759	33254003	.	+	0	Parent=comp136997_c0_seq1.mrna1
ChrX	gffcl	locus	33277037	33278008	.	-	.	ID=RLOC_00001990;geneIDs=comp159163_c0_seq1.path1;transcripts=comp159163_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33277037	33278008	.	-	.	ID=comp159163_c0_seq1.mrna1;geneID=comp159163_c0_seq1.path1;Name=comp159163_c0_seq1;Dir=sensecoverage=57.9;identity=99.2;matches=842;mismatches=7;indels=0;unknowns=0;Target=comp159163_c0_seq1 668 826 +;locus=RLOC_00001990
ChrX	stalkie_big_nohaplotig	exon	33277037	33277519	99	-	.	Parent=comp159163_c0_seq1.mrna1;Target=comp159163_c0_seq1 984 1466 +
ChrX	stalkie_big_nohaplotig	exon	33277588	33277723	97	-	.	Parent=comp159163_c0_seq1.mrna1;Target=comp159163_c0_seq1 848 983 +
ChrX	stalkie_big_nohaplotig	exon	33277779	33278008	100	-	.	Parent=comp159163_c0_seq1.mrna1;Target=comp159163_c0_seq1 618 847 +
ChrX	stalkie_big_nohaplotig	CDS	33277800	33277958	.	-	0	Parent=comp159163_c0_seq1.mrna1
ChrX	gffcl	locus	33364064	33408066	.	-	.	ID=RLOC_00001991;geneIDs=comp160639_c0_seq1.path1;transcripts=comp160639_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33364064	33408066	.	-	.	ID=comp160639_c0_seq1.mrna1;geneID=comp160639_c0_seq1.path1;Name=comp160639_c0_seq1;Dir=indeterminatecoverage=78.9;identity=99.9;matches=882;mismatches=1;indels=0;unknowns=0;Target=comp160639_c0_seq1 927 358 .;locus=RLOC_00001991
ChrX	stalkie_big_nohaplotig	exon	33364064	33364904	99	-	.	Parent=comp160639_c0_seq1.mrna1;Target=comp160639_c0_seq1 1134 294 .
ChrX	stalkie_big_nohaplotig	exon	33368676	33368680	100	-	.	Parent=comp160639_c0_seq1.mrna1;Target=comp160639_c0_seq1 293 289 .
ChrX	stalkie_big_nohaplotig	exon	33369964	33369976	100	-	.	Parent=comp160639_c0_seq1.mrna1;Target=comp160639_c0_seq1 288 276 .
ChrX	stalkie_big_nohaplotig	exon	33378343	33378352	100	-	.	Parent=comp160639_c0_seq1.mrna1;Target=comp160639_c0_seq1 260 251 .
ChrX	stalkie_big_nohaplotig	exon	33392583	33392585	100	-	.	Parent=comp160639_c0_seq1.mrna1;Target=comp160639_c0_seq1 250 248 .
ChrX	stalkie_big_nohaplotig	exon	33408058	33408066	100	-	.	Parent=comp160639_c0_seq1.mrna1;Target=comp160639_c0_seq1 247 239 .
ChrX	stalkie_big_nohaplotig	CDS	33364271	33364840	.	-	0	Parent=comp160639_c0_seq1.mrna1
ChrX	gffcl	locus	33432722	33433225	.	-	.	ID=RLOC_00001992;geneIDs=comp149084_c0_seq1.path1;transcripts=comp149084_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33432722	33433225	.	-	.	ID=comp149084_c0_seq1.mrna1;geneID=comp149084_c0_seq1.path1;Name=comp149084_c0_seq1;Dir=indeterminatecoverage=97.7;identity=99.8;matches=503;mismatches=0;indels=1;unknowns=0;Target=comp149084_c0_seq1 515 13 .;CDS_Target=comp149084_c0_seq1 79 14 .;locus=RLOC_00001992
ChrX	stalkie_big_nohaplotig	exon	33432722	33433225	99	-	.	Parent=comp149084_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33433158	33433224	.	-	0	Parent=comp149084_c0_seq1.mrna1
ChrX	gffcl	locus	33516308	33517109	.	-	.	ID=RLOC_00001993;geneIDs=comp147484_c0_seq1.path1;transcripts=comp147484_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33516308	33517109	.	-	.	ID=comp147484_c0_seq1.mrna1;geneID=comp147484_c0_seq1.path1;Name=comp147484_c0_seq1;Dir=indeterminatecoverage=96.5;identity=100.0;matches=802;mismatches=0;indels=0;unknowns=0;Target=comp147484_c0_seq1 831 30 .;CDS_Target=comp147484_c0_seq1 614 546 .;locus=RLOC_00001993
ChrX	stalkie_big_nohaplotig	exon	33516308	33517109	100	-	.	Parent=comp147484_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33516525	33516593	.	-	0	Parent=comp147484_c0_seq1.mrna1
ChrX	gffcl	locus	33523503	33524153	.	-	.	ID=RLOC_00001994;geneIDs=comp145954_c1_seq1.path1;transcripts=comp145954_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33523503	33524153	.	-	.	ID=comp145954_c1_seq1.mrna1;geneID=comp145954_c1_seq1.path1;Name=comp145954_c1_seq1;Dir=indeterminatecoverage=95.2;identity=99.7;matches=649;mismatches=2;indels=0;unknowns=0;Target=comp145954_c1_seq1 670 20 .;CDS_Target=comp145954_c1_seq1 138 22 .;locus=RLOC_00001994
ChrX	stalkie_big_nohaplotig	exon	33523503	33524153	99	-	.	Parent=comp145954_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33524035	33524151	.	-	0	Parent=comp145954_c1_seq1.mrna1
ChrX	gffcl	locus	33541578	33542527	.	+	.	ID=RLOC_00001995;geneIDs=comp142943_c1_seq1.path1;transcripts=comp142943_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33541578	33542527	.	+	.	ID=comp142943_c1_seq1.mrna1;geneID=comp142943_c1_seq1.path1;Name=comp142943_c1_seq1;Dir=sensecoverage=99.8;identity=99.7;matches=610;mismatches=2;indels=0;unknowns=0;Target=comp142943_c1_seq1 253 396 +;locus=RLOC_00001995
ChrX	stalkie_big_nohaplotig	exon	33541578	33541649	100	+	.	Parent=comp142943_c1_seq1.mrna1;Target=comp142943_c1_seq1 2 73 +
ChrX	stalkie_big_nohaplotig	exon	33541988	33542527	99	+	.	Parent=comp142943_c1_seq1.mrna1;Target=comp142943_c1_seq1 74 613 +
ChrX	stalkie_big_nohaplotig	CDS	33542167	33542310	.	+	0	Parent=comp142943_c1_seq1.mrna1
ChrX	gffcl	locus	33564078	33565725	.	-	.	ID=RLOC_00001996;geneIDs=ORF2191.path1;transcripts=ORF2191.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33564078	33565725	.	-	.	ID=ORF2191.mrna1;geneID=ORF2191.path1;Name=ORF2191;Dir=sensecoverage=100.0;identity=95.1;matches=859;mismatches=17;indels=27;unknowns=0;locus=RLOC_00001996
ChrX	stalkie_big_nohaplotig	exon	33564078	33564100	100	-	.	Parent=ORF2191.mrna1;Target=ORF2191 878 900 +
ChrX	stalkie_big_nohaplotig	exon	33564161	33564355	100	-	.	Parent=ORF2191.mrna1;Target=ORF2191 683 877 +
ChrX	stalkie_big_nohaplotig	exon	33564671	33564810	99	-	.	Parent=ORF2191.mrna1;Target=ORF2191 543 682 +
ChrX	stalkie_big_nohaplotig	exon	33565066	33565492	92	-	.	Parent=ORF2191.mrna1;Target=ORF2191 95 542 +
ChrX	stalkie_big_nohaplotig	exon	33565632	33565725	91	-	.	Parent=ORF2191.mrna1;Target=ORF2191 1 94 +
ChrX	stalkie_big_nohaplotig	CDS	33564078	33564100	.	-	2	Parent=ORF2191.mrna1;Target=ORF2191 878 900 +
ChrX	stalkie_big_nohaplotig	CDS	33564161	33564355	.	-	2	Parent=ORF2191.mrna1;Target=ORF2191 683 877 +
ChrX	stalkie_big_nohaplotig	CDS	33564671	33564810	.	-	1	Parent=ORF2191.mrna1;Target=ORF2191 543 682 +
ChrX	stalkie_big_nohaplotig	CDS	33565066	33565492	.	-	2	Parent=ORF2191.mrna1;Target=ORF2191 95 542 +
ChrX	stalkie_big_nohaplotig	CDS	33565632	33565725	.	-	0	Parent=ORF2191.mrna1;Target=ORF2191 1 94 +
ChrX	gffcl	locus	33578969	33579589	.	-	.	ID=RLOC_00001997;geneIDs=comp7034_c1_seq1.path1;transcripts=comp7034_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33578969	33579589	.	-	.	ID=comp7034_c1_seq1.mrna1;geneID=comp7034_c1_seq1.path1;Name=comp7034_c1_seq1;Dir=indeterminatecoverage=97.2;identity=100.0;matches=621;mismatches=0;indels=0;unknowns=0;Target=comp7034_c1_seq1 639 19 .;CDS_Target=comp7034_c1_seq1 633 535 .;locus=RLOC_00001997
ChrX	stalkie_big_nohaplotig	exon	33578969	33579589	100	-	.	Parent=comp7034_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33578975	33579073	.	-	0	Parent=comp7034_c1_seq1.mrna1
ChrX	gffcl	locus	33583482	33585347	.	+	.	ID=RLOC_00001998;geneIDs=ORF622.path1;transcripts=ORF622.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33583482	33585347	.	+	.	ID=ORF622.mrna1;geneID=ORF622.path1;Name=ORF622;Dir=antisensecoverage=100.0;identity=99.1;matches=1582;mismatches=2;indels=12;unknowns=0;Target=ORF622 1428 1595 .;locus=RLOC_00001998
ChrX	stalkie_big_nohaplotig	exon	33583482	33584257	98	+	.	Parent=ORF622.mrna1;Target=ORF622 809 1596 -
ChrX	stalkie_big_nohaplotig	exon	33584540	33585347	99	+	.	Parent=ORF622.mrna1;Target=ORF622 1 808 -
ChrX	stalkie_big_nohaplotig	CDS	33583483	33583650	.	+	0	Parent=ORF622.mrna1
ChrX	gffcl	locus	33585873	33587132	.	+	.	ID=RLOC_00001999;geneIDs=comp157350_c1_seq1.path1;transcripts=comp157350_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33585873	33587132	.	+	.	ID=comp157350_c1_seq1.mrna1;geneID=comp157350_c1_seq1.path1;Name=comp157350_c1_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=1233;mismatches=25;indels=17;unknowns=0;Target=comp157350_c1_seq1 1273 1 .;CDS_Target=comp157350_c1_seq1 336 214 .;locus=RLOC_00001999
ChrX	stalkie_big_nohaplotig	exon	33585873	33587132	96	+	.	Parent=comp157350_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33586086	33586209	.	+	0	Parent=comp157350_c1_seq1.mrna1
ChrX	gffcl	locus	33641951	33646966	.	+	.	ID=RLOC_00002000;geneIDs=FBgn0051871.1.path1;transcripts=FBgn0051871.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33641951	33646966	.	+	.	ID=FBgn0051871.1.mrna1;geneID=FBgn0051871.1.path1;Name=FBgn0051871.1;Dir=sensecoverage=100.0;identity=100.0;matches=972;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002000
ChrX	stalkie_big_nohaplotig	exon	33641951	33642037	100	+	.	Parent=FBgn0051871.1.mrna1;Target=FBgn0051871.1 1 87 +
ChrX	stalkie_big_nohaplotig	exon	33642148	33642297	100	+	.	Parent=FBgn0051871.1.mrna1;Target=FBgn0051871.1 88 237 +
ChrX	stalkie_big_nohaplotig	exon	33642616	33642774	100	+	.	Parent=FBgn0051871.1.mrna1;Target=FBgn0051871.1 238 396 +
ChrX	stalkie_big_nohaplotig	exon	33646391	33646966	100	+	.	Parent=FBgn0051871.1.mrna1;Target=FBgn0051871.1 397 972 +
ChrX	stalkie_big_nohaplotig	CDS	33641951	33642037	.	+	0	Parent=FBgn0051871.1.mrna1;Target=FBgn0051871.1 1 87 +
ChrX	stalkie_big_nohaplotig	CDS	33642148	33642297	.	+	0	Parent=FBgn0051871.1.mrna1;Target=FBgn0051871.1 88 237 +
ChrX	stalkie_big_nohaplotig	CDS	33642616	33642774	.	+	0	Parent=FBgn0051871.1.mrna1;Target=FBgn0051871.1 238 396 +
ChrX	stalkie_big_nohaplotig	CDS	33646391	33646966	.	+	0	Parent=FBgn0051871.1.mrna1;Target=FBgn0051871.1 397 972 +
ChrX	gffcl	locus	33648690	33648973	.	+	.	ID=RLOC_00002001;geneIDs=comp118918_c0_seq1.path1;transcripts=comp118918_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33648690	33648973	.	+	.	ID=comp118918_c0_seq1.mrna1;geneID=comp118918_c0_seq1.path1;Name=comp118918_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.6;matches=283;mismatches=1;indels=0;unknowns=0;Target=comp118918_c0_seq1 284 1 .;CDS_Target=comp118918_c0_seq1 243 148 .;locus=RLOC_00002001
ChrX	stalkie_big_nohaplotig	exon	33648690	33648973	99	+	.	Parent=comp118918_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33648837	33648932	.	+	0	Parent=comp118918_c0_seq1.mrna1
ChrX	gffcl	locus	33657690	33658612	.	-	.	ID=RLOC_00002002;geneIDs=ORF2098.path1,ORF2098.path2;transcripts=ORF2098.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33657690	33658612	.	-	.	ID=ORF2098.mrna1;geneID=ORF2098.path1;Name=ORF2098;Dir=sensecoverage=94.2;identity=99.1;matches=857;mismatches=8;indels=0;unknowns=0;locus=RLOC_00002002
ChrX	stalkie_big_nohaplotig	exon	33657690	33657903	96	-	.	Parent=ORF2098.mrna1;Target=ORF2098 652 865 +
ChrX	stalkie_big_nohaplotig	exon	33657962	33658612	100	-	.	Parent=ORF2098.mrna1;Target=ORF2098 1 651 +
ChrX	stalkie_big_nohaplotig	CDS	33657690	33657903	.	-	0	Parent=ORF2098.mrna1;Target=ORF2098 652 865 +
ChrX	stalkie_big_nohaplotig	CDS	33657962	33658612	.	-	0	Parent=ORF2098.mrna1;Target=ORF2098 1 651 +
ChrX	gffcl	locus	33660465	33660908	.	+	.	ID=RLOC_00002003;geneIDs=comp135567_c0_seq1.path1;transcripts=comp135567_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33660465	33660908	.	+	.	ID=comp135567_c0_seq1.mrna1;geneID=comp135567_c0_seq1.path1;Name=comp135567_c0_seq1;Dir=sensecoverage=99.2;identity=99.2;matches=385;mismatches=3;indels=0;unknowns=0;Target=comp135567_c0_seq1 4 228 +;locus=RLOC_00002003
ChrX	stalkie_big_nohaplotig	exon	33660465	33660693	100	+	.	Parent=comp135567_c0_seq1.mrna1;Target=comp135567_c0_seq1 2 230 +
ChrX	stalkie_big_nohaplotig	exon	33660750	33660908	98	+	.	Parent=comp135567_c0_seq1.mrna1;Target=comp135567_c0_seq1 231 389 +
ChrX	stalkie_big_nohaplotig	CDS	33660467	33660691	.	+	0	Parent=comp135567_c0_seq1.mrna1
ChrX	gffcl	locus	33666486	33670617	.	+	.	ID=RLOC_00002004;geneIDs=comp162248_c0_seq1.path1;transcripts=comp162248_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33666486	33670617	.	+	.	ID=comp162248_c0_seq1.mrna1;geneID=comp162248_c0_seq1.path1;Name=comp162248_c0_seq1;Dir=antisensecoverage=99.8;identity=99.5;matches=4034;mismatches=5;indels=16;unknowns=0;Target=comp162248_c0_seq1 452 3616 .;locus=RLOC_00002004
ChrX	stalkie_big_nohaplotig	exon	33666486	33670245	99	+	.	Parent=comp162248_c0_seq1.mrna1;Target=comp162248_c0_seq1 303 4046 -
ChrX	stalkie_big_nohaplotig	exon	33670323	33670617	100	+	.	Parent=comp162248_c0_seq1.mrna1;Target=comp162248_c0_seq1 8 302 -
ChrX	stalkie_big_nohaplotig	CDS	33666932	33670096	.	+	0	Parent=comp162248_c0_seq1.mrna1
ChrX	gffcl	locus	33677320	33677535	.	-	.	ID=RLOC_00002005;geneIDs=comp120846_c0_seq1.path1;transcripts=comp120846_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33677320	33677535	.	-	.	ID=comp120846_c0_seq1.mrna1;geneID=comp120846_c0_seq1.path1;Name=comp120846_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=216;mismatches=0;indels=0;unknowns=0;Target=comp120846_c0_seq1 216 1 .;CDS_Target=comp120846_c0_seq1 122 3 .;locus=RLOC_00002005
ChrX	stalkie_big_nohaplotig	exon	33677320	33677535	100	-	.	Parent=comp120846_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33677414	33677533	.	-	0	Parent=comp120846_c0_seq1.mrna1
ChrX	gffcl	locus	33685627	33688909	.	-	.	ID=RLOC_00002006;geneIDs=comp158421_c0_seq1.path1;transcripts=comp158421_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33685627	33688909	.	-	.	ID=comp158421_c0_seq1.mrna1;geneID=comp158421_c0_seq1.path1;Name=comp158421_c0_seq1;Dir=sensecoverage=99.8;identity=98.6;matches=1373;mismatches=6;indels=14;unknowns=0;locus=RLOC_00002006
ChrX	stalkie_big_nohaplotig	exon	33685627	33686365	99	-	.	Parent=comp158421_c0_seq1.mrna1;Target=comp158421_c0_seq1 655 1393 +
ChrX	stalkie_big_nohaplotig	exon	33686446	33686565	89	-	.	Parent=comp158421_c0_seq1.mrna1;Target=comp158421_c0_seq1 521 654 +
ChrX	stalkie_big_nohaplotig	exon	33688327	33688501	100	-	.	Parent=comp158421_c0_seq1.mrna1;Target=comp158421_c0_seq1 346 520 +
ChrX	stalkie_big_nohaplotig	exon	33688565	33688909	98	-	.	Parent=comp158421_c0_seq1.mrna1;Target=comp158421_c0_seq1 1 345 +
ChrX	stalkie_big_nohaplotig	CDS	33688416	33688501	.	-	2	Parent=comp158421_c0_seq1.mrna1;Target=comp158421_c0_seq1 346 431 +
ChrX	stalkie_big_nohaplotig	CDS	33688565	33688799	.	-	0	Parent=comp158421_c0_seq1.mrna1;Target=comp158421_c0_seq1 111 345 +
ChrX	gffcl	locus	33692556	33693258	.	-	.	ID=RLOC_00002007;geneIDs=comp135661_c0_seq1.path1;transcripts=comp135661_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33692556	33693258	.	-	.	ID=comp135661_c0_seq1.mrna1;geneID=comp135661_c0_seq1.path1;Name=comp135661_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.7;matches=701;mismatches=2;indels=0;unknowns=0;Target=comp135661_c0_seq1 705 3 .;CDS_Target=comp135661_c0_seq1 278 201 .;locus=RLOC_00002007
ChrX	stalkie_big_nohaplotig	exon	33692556	33693258	99	-	.	Parent=comp135661_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33692983	33693060	.	-	0	Parent=comp135661_c0_seq1.mrna1
ChrX	gffcl	locus	33693623	33694327	.	+	.	ID=RLOC_00002008;geneIDs=comp140837_c0_seq1.path1;transcripts=comp140837_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33693623	33694327	.	+	.	ID=comp140837_c0_seq1.mrna1;geneID=comp140837_c0_seq1.path1;Name=comp140837_c0_seq1;Dir=indeterminatecoverage=98.2;identity=100.0;matches=705;mismatches=0;indels=0;unknowns=0;Target=comp140837_c0_seq1 705 1 .;CDS_Target=comp140837_c0_seq1 200 111 .;locus=RLOC_00002008
ChrX	stalkie_big_nohaplotig	exon	33693623	33694327	100	+	.	Parent=comp140837_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33693733	33693822	.	+	0	Parent=comp140837_c0_seq1.mrna1
ChrX	gffcl	locus	33696855	33698416	.	+	.	ID=RLOC_00002009;geneIDs=comp159879_c0_seq1.path1;transcripts=comp159879_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33696855	33698416	.	+	.	ID=comp159879_c0_seq1.mrna1;geneID=comp159879_c0_seq1.path1;Name=comp159879_c0_seq1;Dir=indeterminatecoverage=99.3;identity=96.9;matches=1462;mismatches=16;indels=31;unknowns=0;Target=comp159879_c0_seq1 1618 1367 .;locus=RLOC_00002009
ChrX	stalkie_big_nohaplotig	exon	33696855	33697074	99	+	.	Parent=comp159879_c0_seq1.mrna1;Target=comp159879_c0_seq1 222 3 .
ChrX	stalkie_big_nohaplotig	exon	33697083	33697183	95	+	.	Parent=comp159879_c0_seq1.mrna1;Target=comp159879_c0_seq1 693 593 .
ChrX	stalkie_big_nohaplotig	exon	33697230	33698416	96	+	.	Parent=comp159879_c0_seq1.mrna1;Target=comp159879_c0_seq1 1879 722 .
ChrX	stalkie_big_nohaplotig	CDS	33697904	33698155	.	+	0	Parent=comp159879_c0_seq1.mrna1
ChrX	gffcl	locus	33705240	33705945	.	+	.	ID=RLOC_00002010;geneIDs=comp154283_c0_seq1.path1;transcripts=comp154283_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33705240	33705945	.	+	.	ID=comp154283_c0_seq1.mrna1;geneID=comp154283_c0_seq1.path1;Name=comp154283_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=706;mismatches=0;indels=0;unknowns=0;Target=comp154283_c0_seq1 706 1 .;CDS_Target=comp154283_c0_seq1 241 2 .;locus=RLOC_00002010
ChrX	stalkie_big_nohaplotig	exon	33705240	33705945	100	+	.	Parent=comp154283_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33705241	33705480	.	+	0	Parent=comp154283_c0_seq1.mrna1
ChrX	gffcl	locus	33708387	33709414	.	+	.	ID=RLOC_00002011;geneIDs=comp147209_c0_seq1.path1;transcripts=comp147209_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33708387	33709414	.	+	.	ID=comp147209_c0_seq1.mrna1;geneID=comp147209_c0_seq1.path1;Name=comp147209_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.5;matches=1018;mismatches=1;indels=36;unknowns=0;Target=comp147209_c0_seq1 965 873 .;locus=RLOC_00002011
ChrX	stalkie_big_nohaplotig	exon	33708387	33709156	97	+	.	Parent=comp147209_c0_seq1.mrna1;Target=comp147209_c0_seq1 788 1 .
ChrX	stalkie_big_nohaplotig	exon	33709166	33709414	93	+	.	Parent=comp147209_c0_seq1.mrna1;Target=comp147209_c0_seq1 1106 840 .
ChrX	stalkie_big_nohaplotig	CDS	33709181	33709273	.	+	0	Parent=comp147209_c0_seq1.mrna1
ChrX	gffcl	locus	33716473	33717182	.	+	.	ID=RLOC_00002012;geneIDs=comp119901_c0_seq1.path1;transcripts=comp119901_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33716473	33717182	.	+	.	ID=comp119901_c0_seq1.mrna1;geneID=comp119901_c0_seq1.path1;Name=comp119901_c0_seq1;Dir=indeterminatecoverage=95.6;identity=99.9;matches=709;mismatches=0;indels=1;unknowns=0;Target=comp119901_c0_seq1 741 33 .;CDS_Target=comp119901_c0_seq1 623 384 .;locus=RLOC_00002012
ChrX	stalkie_big_nohaplotig	exon	33716473	33717182	99	+	.	Parent=comp119901_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33716825	33717064	.	+	0	Parent=comp119901_c0_seq1.mrna1
ChrX	gffcl	locus	33735035	33736934	.	-	.	ID=RLOC_00002013;geneIDs=FBgn0037583.1.path1;transcripts=FBgn0037583.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33735035	33736934	.	-	.	ID=FBgn0037583.1.mrna1;geneID=FBgn0037583.1.path1;Name=FBgn0037583.1;Dir=sensecoverage=100.0;identity=99.9;matches=1403;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002013
ChrX	stalkie_big_nohaplotig	exon	33735035	33735192	100	-	.	Parent=FBgn0037583.1.mrna1;Target=FBgn0037583.1 1247 1404 +
ChrX	stalkie_big_nohaplotig	exon	33735257	33735447	100	-	.	Parent=FBgn0037583.1.mrna1;Target=FBgn0037583.1 1056 1246 +
ChrX	stalkie_big_nohaplotig	exon	33735516	33735694	99	-	.	Parent=FBgn0037583.1.mrna1;Target=FBgn0037583.1 877 1055 +
ChrX	stalkie_big_nohaplotig	exon	33735782	33736493	100	-	.	Parent=FBgn0037583.1.mrna1;Target=FBgn0037583.1 165 876 +
ChrX	stalkie_big_nohaplotig	exon	33736559	33736702	100	-	.	Parent=FBgn0037583.1.mrna1;Target=FBgn0037583.1 21 164 +
ChrX	stalkie_big_nohaplotig	exon	33736915	33736934	100	-	.	Parent=FBgn0037583.1.mrna1;Target=FBgn0037583.1 1 20 +
ChrX	stalkie_big_nohaplotig	CDS	33735035	33735192	.	-	2	Parent=FBgn0037583.1.mrna1;Target=FBgn0037583.1 1247 1404 +
ChrX	stalkie_big_nohaplotig	CDS	33735257	33735447	.	-	1	Parent=FBgn0037583.1.mrna1;Target=FBgn0037583.1 1056 1246 +
ChrX	stalkie_big_nohaplotig	CDS	33735516	33735694	.	-	0	Parent=FBgn0037583.1.mrna1;Target=FBgn0037583.1 877 1055 +
ChrX	stalkie_big_nohaplotig	CDS	33735782	33736493	.	-	1	Parent=FBgn0037583.1.mrna1;Target=FBgn0037583.1 165 876 +
ChrX	stalkie_big_nohaplotig	CDS	33736559	33736702	.	-	1	Parent=FBgn0037583.1.mrna1;Target=FBgn0037583.1 21 164 +
ChrX	stalkie_big_nohaplotig	CDS	33736915	33736934	.	-	0	Parent=FBgn0037583.1.mrna1;Target=FBgn0037583.1 1 20 +
ChrX	gffcl	locus	33738878	33740545	.	+	.	ID=RLOC_00002014;geneIDs=FBgn0037583.1.path2;transcripts=FBgn0037583.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	33738878	33740545	.	+	.	ID=FBgn0037583.1.mrna2;geneID=FBgn0037583.1.path2;Name=FBgn0037583.1;Dir=sensecoverage=98.6;identity=99.9;matches=1383;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002014
ChrX	stalkie_big_nohaplotig	exon	33738878	33739021	100	+	.	Parent=FBgn0037583.1.mrna2;Target=FBgn0037583.1 21 164 +
ChrX	stalkie_big_nohaplotig	exon	33739087	33739798	100	+	.	Parent=FBgn0037583.1.mrna2;Target=FBgn0037583.1 165 876 +
ChrX	stalkie_big_nohaplotig	exon	33739886	33740064	99	+	.	Parent=FBgn0037583.1.mrna2;Target=FBgn0037583.1 877 1055 +
ChrX	stalkie_big_nohaplotig	exon	33740133	33740323	100	+	.	Parent=FBgn0037583.1.mrna2;Target=FBgn0037583.1 1056 1246 +
ChrX	stalkie_big_nohaplotig	exon	33740388	33740545	100	+	.	Parent=FBgn0037583.1.mrna2;Target=FBgn0037583.1 1247 1404 +
ChrX	stalkie_big_nohaplotig	CDS	33738879	33739021	.	+	0	Parent=FBgn0037583.1.mrna2;Target=FBgn0037583.1 22 164 +
ChrX	stalkie_big_nohaplotig	CDS	33739087	33739798	.	+	1	Parent=FBgn0037583.1.mrna2;Target=FBgn0037583.1 165 876 +
ChrX	stalkie_big_nohaplotig	CDS	33739886	33740064	.	+	0	Parent=FBgn0037583.1.mrna2;Target=FBgn0037583.1 877 1055 +
ChrX	stalkie_big_nohaplotig	CDS	33740133	33740323	.	+	1	Parent=FBgn0037583.1.mrna2;Target=FBgn0037583.1 1056 1246 +
ChrX	stalkie_big_nohaplotig	CDS	33740388	33740545	.	+	2	Parent=FBgn0037583.1.mrna2;Target=FBgn0037583.1 1247 1404 +
ChrX	gffcl	locus	33749894	33751883	.	+	.	ID=RLOC_00002015;geneIDs=comp153804_c0_seq1.path1;transcripts=comp153804_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33749894	33751883	.	+	.	ID=comp153804_c0_seq1.mrna1;geneID=comp153804_c0_seq1.path1;Name=comp153804_c0_seq1;Dir=antisensecoverage=95.5;identity=100.0;matches=850;mismatches=0;indels=0;unknowns=0;Target=comp153804_c0_seq1 493 705 .;locus=RLOC_00002015
ChrX	stalkie_big_nohaplotig	exon	33749894	33750344	100	+	.	Parent=comp153804_c0_seq1.mrna1;Target=comp153804_c0_seq1 421 871 -
ChrX	stalkie_big_nohaplotig	exon	33750416	33750481	100	+	.	Parent=comp153804_c0_seq1.mrna1;Target=comp153804_c0_seq1 355 420 -
ChrX	stalkie_big_nohaplotig	exon	33751551	33751883	100	+	.	Parent=comp153804_c0_seq1.mrna1;Target=comp153804_c0_seq1 22 354 -
ChrX	stalkie_big_nohaplotig	CDS	33750060	33750272	.	+	0	Parent=comp153804_c0_seq1.mrna1
ChrX	gffcl	locus	33761537	33762253	.	-	.	ID=RLOC_00002016;geneIDs=comp151258_c0_seq1.path1;transcripts=comp151258_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33761537	33762253	.	-	.	ID=comp151258_c0_seq1.mrna1;geneID=comp151258_c0_seq1.path1;Name=comp151258_c0_seq1;Dir=indeterminatecoverage=98.8;identity=100.0;matches=717;mismatches=0;indels=0;unknowns=0;Target=comp151258_c0_seq1 726 10 .;CDS_Target=comp151258_c0_seq1 588 31 .;locus=RLOC_00002016
ChrX	stalkie_big_nohaplotig	exon	33761537	33762253	100	-	.	Parent=comp151258_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33761675	33762232	.	-	0	Parent=comp151258_c0_seq1.mrna1
ChrX	gffcl	locus	33775501	33776487	.	-	.	ID=RLOC_00002017;geneIDs=comp57483_c0_seq1.path1;transcripts=comp57483_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33775501	33776487	.	-	.	ID=comp57483_c0_seq1.mrna1;geneID=comp57483_c0_seq1.path1;Name=comp57483_c0_seq1;Dir=sensecoverage=99.9;identity=100.0;matches=932;mismatches=0;indels=0;unknowns=0;Target=comp57483_c0_seq1 190 762 +;locus=RLOC_00002017
ChrX	stalkie_big_nohaplotig	exon	33775501	33775654	100	-	.	Parent=comp57483_c0_seq1.mrna1;Target=comp57483_c0_seq1 780 933 +
ChrX	stalkie_big_nohaplotig	exon	33775710	33776487	100	-	.	Parent=comp57483_c0_seq1.mrna1;Target=comp57483_c0_seq1 2 779 +
ChrX	stalkie_big_nohaplotig	CDS	33775727	33776299	.	-	0	Parent=comp57483_c0_seq1.mrna1
ChrX	gffcl	locus	33796128	33796666	.	-	.	ID=RLOC_00002018;geneIDs=comp132463_c0_seq1.path1;transcripts=comp132463_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33796128	33796666	.	-	.	ID=comp132463_c0_seq1.mrna1;geneID=comp132463_c0_seq1.path1;Name=comp132463_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=538;mismatches=1;indels=0;unknowns=0;Target=comp132463_c0_seq1 539 1 .;CDS_Target=comp132463_c0_seq1 340 71 .;locus=RLOC_00002018
ChrX	stalkie_big_nohaplotig	exon	33796128	33796666	99	-	.	Parent=comp132463_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33796327	33796596	.	-	0	Parent=comp132463_c0_seq1.mrna1
ChrX	gffcl	locus	33814891	33816583	.	+	.	ID=RLOC_00002019;geneIDs=comp149157_c0_seq1.path1;transcripts=comp149157_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33814891	33816583	.	+	.	ID=comp149157_c0_seq1.mrna1;geneID=comp149157_c0_seq1.path1;Name=comp149157_c0_seq1;Dir=antisensecoverage=96.6;identity=99.0;matches=799;mismatches=5;indels=3;unknowns=0;Target=comp149157_c0_seq1 156 401 .;locus=RLOC_00002019
ChrX	stalkie_big_nohaplotig	exon	33814891	33815085	100	+	.	Parent=comp149157_c0_seq1.mrna1;Target=comp149157_c0_seq1 640 834 -
ChrX	stalkie_big_nohaplotig	exon	33815164	33815395	96	+	.	Parent=comp149157_c0_seq1.mrna1;Target=comp149157_c0_seq1 407 639 -
ChrX	stalkie_big_nohaplotig	exon	33816206	33816583	100	+	.	Parent=comp149157_c0_seq1.mrna1;Target=comp149157_c0_seq1 29 406 -
ChrX	stalkie_big_nohaplotig	CDS	33816211	33816456	.	+	0	Parent=comp149157_c0_seq1.mrna1
ChrX	gffcl	locus	33838950	33839801	.	-	.	ID=RLOC_00002020;geneIDs=comp147556_c0_seq1.path1;transcripts=comp147556_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33838950	33839801	.	-	.	ID=comp147556_c0_seq1.mrna1;geneID=comp147556_c0_seq1.path1;Name=comp147556_c0_seq1;Dir=sensecoverage=97.4;identity=100.0;matches=799;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002020
ChrX	stalkie_big_nohaplotig	exon	33838950	33839356	100	-	.	Parent=comp147556_c0_seq1.mrna1;Target=comp147556_c0_seq1 414 820 +
ChrX	stalkie_big_nohaplotig	exon	33839410	33839801	100	-	.	Parent=comp147556_c0_seq1.mrna1;Target=comp147556_c0_seq1 22 413 +
ChrX	stalkie_big_nohaplotig	CDS	33839169	33839356	.	-	2	Parent=comp147556_c0_seq1.mrna1;Target=comp147556_c0_seq1 414 601 +
ChrX	stalkie_big_nohaplotig	CDS	33839410	33839482	.	-	0	Parent=comp147556_c0_seq1.mrna1;Target=comp147556_c0_seq1 341 413 +
ChrX	gffcl	locus	33845958	33846857	.	+	.	ID=RLOC_00002021;geneIDs=ORF2114.path1;transcripts=ORF2114.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33845958	33846857	.	+	.	ID=ORF2114.mrna1;geneID=ORF2114.path1;Name=ORF2114;Dir=indeterminatecoverage=100.0;identity=96.5;matches=883;mismatches=17;indels=15;unknowns=0;Target=ORF2114 915 1 .;locus=RLOC_00002021
ChrX	stalkie_big_nohaplotig	exon	33845958	33846857	96	+	.	Parent=ORF2114.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33845958	33846857	.	+	0	Parent=ORF2114.mrna1
ChrX	gffcl	locus	33869683	33871447	.	+	.	ID=RLOC_00002022;geneIDs=FBgn0032271.1.path1;transcripts=FBgn0032271.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33869683	33871447	.	+	.	ID=FBgn0032271.1.mrna1;geneID=FBgn0032271.1.path1;Name=FBgn0032271.1;Dir=sensecoverage=100.0;identity=99.2;matches=818;mismatches=7;indels=0;unknowns=0;locus=RLOC_00002022
ChrX	stalkie_big_nohaplotig	exon	33869683	33870018	97	+	.	Parent=FBgn0032271.1.mrna1;Target=FBgn0032271.1 1 336 +
ChrX	stalkie_big_nohaplotig	exon	33870083	33870217	100	+	.	Parent=FBgn0032271.1.mrna1;Target=FBgn0032271.1 337 471 +
ChrX	stalkie_big_nohaplotig	exon	33871094	33871447	100	+	.	Parent=FBgn0032271.1.mrna1;Target=FBgn0032271.1 472 825 +
ChrX	stalkie_big_nohaplotig	CDS	33869683	33870018	.	+	0	Parent=FBgn0032271.1.mrna1;Target=FBgn0032271.1 1 336 +
ChrX	stalkie_big_nohaplotig	CDS	33870083	33870217	.	+	0	Parent=FBgn0032271.1.mrna1;Target=FBgn0032271.1 337 471 +
ChrX	stalkie_big_nohaplotig	CDS	33871094	33871447	.	+	0	Parent=FBgn0032271.1.mrna1;Target=FBgn0032271.1 472 825 +
ChrX	gffcl	locus	33927511	33928620	.	-	.	ID=RLOC_00002025;geneIDs=comp159942_c0_seq1.path1;transcripts=comp159942_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33927511	33928620	.	-	.	ID=comp159942_c0_seq1.mrna1;geneID=comp159942_c0_seq1.path1;Name=comp159942_c0_seq1;Dir=indeterminatecoverage=90.9;identity=95.2;matches=1065;mismatches=45;indels=9;unknowns=0;Target=comp159942_c0_seq1 1231 113 .;CDS_Target=comp159942_c0_seq1 1204 959 .;locus=RLOC_00002025
ChrX	stalkie_big_nohaplotig	exon	33927511	33928620	95	-	.	Parent=comp159942_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33927538	33927782	.	-	0	Parent=comp159942_c0_seq1.mrna1
ChrX	gffcl	locus	33935059	33935531	.	-	.	ID=RLOC_00002026;geneIDs=comp145082_c0_seq1.path1;transcripts=comp145082_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33935059	33935531	.	-	.	ID=comp145082_c0_seq1.mrna1;geneID=comp145082_c0_seq1.path1;Name=comp145082_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=473;mismatches=0;indels=0;unknowns=0;Target=comp145082_c0_seq1 473 1 .;CDS_Target=comp145082_c0_seq1 126 1 .;locus=RLOC_00002026
ChrX	stalkie_big_nohaplotig	exon	33935059	33935531	100	-	.	Parent=comp145082_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33935406	33935531	.	-	0	Parent=comp145082_c0_seq1.mrna1
ChrX	gffcl	locus	33936409	33936820	.	-	.	ID=RLOC_00002027;geneIDs=comp159534_c1_seq1.path1;transcripts=comp159534_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33936409	33936820	.	-	.	ID=comp159534_c1_seq1.mrna1;geneID=comp159534_c1_seq1.path1;Name=comp159534_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=403;mismatches=9;indels=0;unknowns=0;Target=comp159534_c1_seq1 412 1 .;CDS_Target=comp159534_c1_seq1 167 123 .;locus=RLOC_00002027
ChrX	stalkie_big_nohaplotig	exon	33936409	33936820	97	-	.	Parent=comp159534_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33936654	33936698	.	-	0	Parent=comp159534_c1_seq1.mrna1
ChrX	gffcl	locus	33936927	33937172	.	+	.	ID=RLOC_00002028;geneIDs=FBgn0032289.path1;transcripts=FBgn0032289.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33936927	33937172	.	+	.	ID=FBgn0032289.mrna1;geneID=FBgn0032289.path1;Name=FBgn0032289;Dir=indeterminatecoverage=100.0;identity=100.0;matches=245;mismatches=0;indels=0;unknowns=1;Target=FBgn0032289 246 1 .;locus=RLOC_00002028
ChrX	stalkie_big_nohaplotig	exon	33936927	33937172	100	+	.	Parent=FBgn0032289.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33936927	33937172	.	+	0	Parent=FBgn0032289.mrna1
ChrX	gffcl	locus	33942687	33946869	.	+	.	ID=RLOC_00002029;geneIDs=FBgn0032295.4.path1;transcripts=FBgn0032295.4.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33942687	33946869	.	+	.	ID=FBgn0032295.4.mrna1;geneID=FBgn0032295.4.path1;Name=FBgn0032295.4;Dir=sensecoverage=99.2;identity=100.0;matches=2078;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002029
ChrX	stalkie_big_nohaplotig	exon	33942687	33943700	100	+	.	Parent=FBgn0032295.4.mrna1;Target=FBgn0032295.4 8 1021 +
ChrX	stalkie_big_nohaplotig	exon	33945806	33946869	100	+	.	Parent=FBgn0032295.4.mrna1;Target=FBgn0032295.4 1022 2085 +
ChrX	stalkie_big_nohaplotig	CDS	33942689	33943700	.	+	0	Parent=FBgn0032295.4.mrna1;Target=FBgn0032295.4 10 1021 +
ChrX	stalkie_big_nohaplotig	CDS	33945806	33946869	.	+	2	Parent=FBgn0032295.4.mrna1;Target=FBgn0032295.4 1022 2085 +
ChrX	gffcl	locus	33950261	33951275	.	+	.	ID=RLOC_00002030;geneIDs=comp152479_c0_seq1.path1;transcripts=comp152479_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33950261	33951275	.	+	.	ID=comp152479_c0_seq1.mrna1;geneID=comp152479_c0_seq1.path1;Name=comp152479_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=987;mismatches=25;indels=3;unknowns=0;Target=comp152479_c0_seq1 1012 1 .;CDS_Target=comp152479_c0_seq1 397 266 .;locus=RLOC_00002030
ChrX	stalkie_big_nohaplotig	exon	33950261	33951275	97	+	.	Parent=comp152479_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33950526	33950657	.	+	0	Parent=comp152479_c0_seq1.mrna1
ChrX	gffcl	locus	33951397	33952419	.	-	.	ID=RLOC_00002031;geneIDs=FBgn0032290.1.path1;transcripts=FBgn0032290.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33951397	33952419	.	-	.	ID=FBgn0032290.1.mrna1;geneID=FBgn0032290.1.path1;Name=FBgn0032290.1;Dir=sensecoverage=100.0;identity=100.0;matches=957;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002031
ChrX	stalkie_big_nohaplotig	exon	33951397	33952275	100	-	.	Parent=FBgn0032290.1.mrna1;Target=FBgn0032290.1 79 957 +
ChrX	stalkie_big_nohaplotig	exon	33952342	33952419	100	-	.	Parent=FBgn0032290.1.mrna1;Target=FBgn0032290.1 1 78 +
ChrX	stalkie_big_nohaplotig	CDS	33951397	33952275	.	-	0	Parent=FBgn0032290.1.mrna1;Target=FBgn0032290.1 79 957 +
ChrX	stalkie_big_nohaplotig	CDS	33952342	33952419	.	-	0	Parent=FBgn0032290.1.mrna1;Target=FBgn0032290.1 1 78 +
ChrX	gffcl	locus	33953508	33962554	.	+	.	ID=RLOC_00002032;geneIDs=FBgn0032296.1.path1;transcripts=FBgn0032296.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33953508	33962554	.	+	.	ID=FBgn0032296.1.mrna1;geneID=FBgn0032296.1.path1;Name=FBgn0032296.1;Dir=sensecoverage=100.0;identity=100.0;matches=2706;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002032
ChrX	stalkie_big_nohaplotig	exon	33953508	33953572	100	+	.	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 1 65 +
ChrX	stalkie_big_nohaplotig	exon	33953626	33953764	100	+	.	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 66 204 +
ChrX	stalkie_big_nohaplotig	exon	33953822	33954096	100	+	.	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 205 479 +
ChrX	stalkie_big_nohaplotig	exon	33954438	33954568	100	+	.	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 480 610 +
ChrX	stalkie_big_nohaplotig	exon	33954631	33954724	100	+	.	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 611 704 +
ChrX	stalkie_big_nohaplotig	exon	33954787	33954961	100	+	.	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 705 879 +
ChrX	stalkie_big_nohaplotig	exon	33955027	33955197	100	+	.	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 880 1050 +
ChrX	stalkie_big_nohaplotig	exon	33955521	33955622	100	+	.	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 1051 1152 +
ChrX	stalkie_big_nohaplotig	exon	33956840	33956886	100	+	.	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 1153 1199 +
ChrX	stalkie_big_nohaplotig	exon	33956953	33957052	100	+	.	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 1200 1299 +
ChrX	stalkie_big_nohaplotig	exon	33957168	33957538	100	+	.	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 1300 1670 +
ChrX	stalkie_big_nohaplotig	exon	33960052	33960716	100	+	.	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 1671 2335 +
ChrX	stalkie_big_nohaplotig	exon	33960772	33960926	100	+	.	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 2336 2490 +
ChrX	stalkie_big_nohaplotig	exon	33962339	33962554	100	+	.	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 2491 2706 +
ChrX	stalkie_big_nohaplotig	CDS	33953508	33953572	.	+	0	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 1 65 +
ChrX	stalkie_big_nohaplotig	CDS	33953626	33953764	.	+	1	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 66 204 +
ChrX	stalkie_big_nohaplotig	CDS	33953822	33954096	.	+	0	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 205 479 +
ChrX	stalkie_big_nohaplotig	CDS	33954438	33954568	.	+	1	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 480 610 +
ChrX	stalkie_big_nohaplotig	CDS	33954631	33954724	.	+	2	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 611 704 +
ChrX	stalkie_big_nohaplotig	CDS	33954787	33954961	.	+	1	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 705 879 +
ChrX	stalkie_big_nohaplotig	CDS	33955027	33955197	.	+	0	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 880 1050 +
ChrX	stalkie_big_nohaplotig	CDS	33955521	33955622	.	+	0	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 1051 1152 +
ChrX	stalkie_big_nohaplotig	CDS	33956840	33956886	.	+	0	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 1153 1199 +
ChrX	stalkie_big_nohaplotig	CDS	33956953	33957052	.	+	1	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 1200 1299 +
ChrX	stalkie_big_nohaplotig	CDS	33957168	33957538	.	+	0	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 1300 1670 +
ChrX	stalkie_big_nohaplotig	CDS	33960052	33960716	.	+	1	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 1671 2335 +
ChrX	stalkie_big_nohaplotig	CDS	33960772	33960926	.	+	2	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 2336 2490 +
ChrX	stalkie_big_nohaplotig	CDS	33962339	33962554	.	+	0	Parent=FBgn0032296.1.mrna1;Target=FBgn0032296.1 2491 2706 +
ChrX	gffcl	locus	33966000	33966840	.	+	.	ID=RLOC_00002033;geneIDs=FBgn0032292.1.path1;transcripts=FBgn0032292.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33966000	33966840	.	+	.	ID=FBgn0032292.1.mrna1;geneID=FBgn0032292.1.path1;Name=FBgn0032292.1;Dir=sensecoverage=100.0;identity=100.0;matches=762;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002033
ChrX	stalkie_big_nohaplotig	exon	33966000	33966151	100	+	.	Parent=FBgn0032292.1.mrna1;Target=FBgn0032292.1 1 152 +
ChrX	stalkie_big_nohaplotig	exon	33966231	33966840	100	+	.	Parent=FBgn0032292.1.mrna1;Target=FBgn0032292.1 153 762 +
ChrX	stalkie_big_nohaplotig	CDS	33966000	33966151	.	+	0	Parent=FBgn0032292.1.mrna1;Target=FBgn0032292.1 1 152 +
ChrX	stalkie_big_nohaplotig	CDS	33966231	33966840	.	+	1	Parent=FBgn0032292.1.mrna1;Target=FBgn0032292.1 153 762 +
ChrX	gffcl	locus	33973176	33975686	.	.	.	ID=RLOC_00002034;geneIDs=comp140331_c0_seq1.path1,comp160013_c0_seq1.path1;transcripts=comp160013_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33974084	33975686	.	-	.	ID=comp160013_c0_seq1.mrna1;geneID=comp160013_c0_seq1.path1;Name=comp160013_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.0;matches=1580;mismatches=13;indels=20;unknowns=0;Target=comp160013_c0_seq1 1607 5 .;CDS_Target=comp160013_c0_seq1 281 147 .;locus=RLOC_00002034
ChrX	stalkie_big_nohaplotig	exon	33974084	33975686	97	-	.	Parent=comp160013_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	33975410	33975544	.	-	0	Parent=comp160013_c0_seq1.mrna1
ChrX	gffcl	locus	33981808	33984202	.	-	.	ID=RLOC_00002035;geneIDs=FBgn0032297.1.path1;transcripts=FBgn0032297.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	33981808	33984202	.	-	.	ID=FBgn0032297.1.mrna1;geneID=FBgn0032297.1.path1;Name=FBgn0032297.1;Dir=sensecoverage=100.0;identity=100.0;matches=405;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002035
ChrX	stalkie_big_nohaplotig	exon	33981808	33981846	100	-	.	Parent=FBgn0032297.1.mrna1;Target=FBgn0032297.1 367 405 +
ChrX	stalkie_big_nohaplotig	exon	33981938	33981979	100	-	.	Parent=FBgn0032297.1.mrna1;Target=FBgn0032297.1 325 366 +
ChrX	stalkie_big_nohaplotig	exon	33983107	33983181	100	-	.	Parent=FBgn0032297.1.mrna1;Target=FBgn0032297.1 250 324 +
ChrX	stalkie_big_nohaplotig	exon	33983954	33984202	100	-	.	Parent=FBgn0032297.1.mrna1;Target=FBgn0032297.1 1 249 +
ChrX	stalkie_big_nohaplotig	CDS	33981808	33981846	.	-	0	Parent=FBgn0032297.1.mrna1;Target=FBgn0032297.1 367 405 +
ChrX	stalkie_big_nohaplotig	CDS	33981938	33981979	.	-	0	Parent=FBgn0032297.1.mrna1;Target=FBgn0032297.1 325 366 +
ChrX	stalkie_big_nohaplotig	CDS	33983107	33983181	.	-	0	Parent=FBgn0032297.1.mrna1;Target=FBgn0032297.1 250 324 +
ChrX	stalkie_big_nohaplotig	CDS	33983954	33984202	.	-	0	Parent=FBgn0032297.1.mrna1;Target=FBgn0032297.1 1 249 +
ChrX	gffcl	locus	34074503	34129212	.	+	.	ID=RLOC_00002036;geneIDs=comp784360_c0_seq1.path1;transcripts=comp784360_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34074503	34129212	.	+	.	ID=comp784360_c0_seq1.mrna1;geneID=comp784360_c0_seq1.path1;Name=comp784360_c0_seq1;Dir=sensecoverage=67.7;identity=99.6;matches=701;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002036
ChrX	stalkie_big_nohaplotig	exon	34074503	34074519	100	+	.	Parent=comp784360_c0_seq1.mrna1;Target=comp784360_c0_seq1 395 411 +
ChrX	stalkie_big_nohaplotig	exon	34082668	34082670	100	+	.	Parent=comp784360_c0_seq1.mrna1;Target=comp784360_c0_seq1 412 414 +
ChrX	stalkie_big_nohaplotig	exon	34104246	34104253	100	+	.	Parent=comp784360_c0_seq1.mrna1;Target=comp784360_c0_seq1 415 422 +
ChrX	stalkie_big_nohaplotig	exon	34108177	34108180	100	+	.	Parent=comp784360_c0_seq1.mrna1;Target=comp784360_c0_seq1 423 426 +
ChrX	stalkie_big_nohaplotig	exon	34108204	34108211	100	+	.	Parent=comp784360_c0_seq1.mrna1;Target=comp784360_c0_seq1 472 479 +
ChrX	stalkie_big_nohaplotig	exon	34112152	34112159	100	+	.	Parent=comp784360_c0_seq1.mrna1;Target=comp784360_c0_seq1 503 510 +
ChrX	stalkie_big_nohaplotig	exon	34112192	34112197	100	+	.	Parent=comp784360_c0_seq1.mrna1;Target=comp784360_c0_seq1 568 573 +
ChrX	stalkie_big_nohaplotig	exon	34113014	34113026	76	+	.	Parent=comp784360_c0_seq1.mrna1;Target=comp784360_c0_seq1 574 586 +
ChrX	stalkie_big_nohaplotig	exon	34119215	34119224	100	+	.	Parent=comp784360_c0_seq1.mrna1;Target=comp784360_c0_seq1 587 596 +
ChrX	stalkie_big_nohaplotig	exon	34122292	34122300	100	+	.	Parent=comp784360_c0_seq1.mrna1;Target=comp784360_c0_seq1 597 605 +
ChrX	stalkie_big_nohaplotig	exon	34128539	34128850	100	+	.	Parent=comp784360_c0_seq1.mrna1;Target=comp784360_c0_seq1 606 917 +
ChrX	stalkie_big_nohaplotig	exon	34128907	34129212	100	+	.	Parent=comp784360_c0_seq1.mrna1;Target=comp784360_c0_seq1 918 1223 +
ChrX	stalkie_big_nohaplotig	CDS	34074503	34074519	.	+	0	Parent=comp784360_c0_seq1.mrna1;Target=comp784360_c0_seq1 395 411 +
ChrX	stalkie_big_nohaplotig	CDS	34082668	34082670	.	+	1	Parent=comp784360_c0_seq1.mrna1;Target=comp784360_c0_seq1 412 414 +
ChrX	stalkie_big_nohaplotig	CDS	34104246	34104253	.	+	1	Parent=comp784360_c0_seq1.mrna1;Target=comp784360_c0_seq1 415 422 +
ChrX	stalkie_big_nohaplotig	CDS	34108177	34108180	.	+	2	Parent=comp784360_c0_seq1.mrna1;Target=comp784360_c0_seq1 423 426 +
ChrX	gffcl	locus	34083103	34087624	.	+	.	ID=RLOC_00002037;geneIDs=FBgn0027550.1.path1;transcripts=FBgn0027550.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34083103	34087624	.	+	.	ID=FBgn0027550.1.mrna1;geneID=FBgn0027550.1.path1;Name=FBgn0027550.1;Dir=sensecoverage=100.0;identity=100.0;matches=1227;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002037
ChrX	stalkie_big_nohaplotig	exon	34083103	34083415	100	+	.	Parent=FBgn0027550.1.mrna1;Target=FBgn0027550.1 1 313 +
ChrX	stalkie_big_nohaplotig	exon	34086516	34087052	100	+	.	Parent=FBgn0027550.1.mrna1;Target=FBgn0027550.1 314 850 +
ChrX	stalkie_big_nohaplotig	exon	34087113	34087237	100	+	.	Parent=FBgn0027550.1.mrna1;Target=FBgn0027550.1 851 975 +
ChrX	stalkie_big_nohaplotig	exon	34087310	34087450	100	+	.	Parent=FBgn0027550.1.mrna1;Target=FBgn0027550.1 976 1116 +
ChrX	stalkie_big_nohaplotig	exon	34087514	34087624	100	+	.	Parent=FBgn0027550.1.mrna1;Target=FBgn0027550.1 1117 1227 +
ChrX	stalkie_big_nohaplotig	CDS	34083103	34083415	.	+	0	Parent=FBgn0027550.1.mrna1;Target=FBgn0027550.1 1 313 +
ChrX	stalkie_big_nohaplotig	CDS	34086516	34087052	.	+	2	Parent=FBgn0027550.1.mrna1;Target=FBgn0027550.1 314 850 +
ChrX	stalkie_big_nohaplotig	CDS	34087113	34087237	.	+	2	Parent=FBgn0027550.1.mrna1;Target=FBgn0027550.1 851 975 +
ChrX	stalkie_big_nohaplotig	CDS	34087310	34087450	.	+	0	Parent=FBgn0027550.1.mrna1;Target=FBgn0027550.1 976 1116 +
ChrX	stalkie_big_nohaplotig	CDS	34087514	34087624	.	+	0	Parent=FBgn0027550.1.mrna1;Target=FBgn0027550.1 1117 1227 +
ChrX	gffcl	locus	34087696	34089634	.	+	.	ID=RLOC_00002038;geneIDs=comp150167_c0_seq1.path1;transcripts=comp150167_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34087696	34089634	.	+	.	ID=comp150167_c0_seq1.mrna1;geneID=comp150167_c0_seq1.path1;Name=comp150167_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=395;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002038
ChrX	stalkie_big_nohaplotig	exon	34087696	34087829	100	+	.	Parent=comp150167_c0_seq1.mrna1;Target=comp150167_c0_seq1 262 395 -
ChrX	stalkie_big_nohaplotig	exon	34089274	34089480	100	+	.	Parent=comp150167_c0_seq1.mrna1;Target=comp150167_c0_seq1 55 261 -
ChrX	stalkie_big_nohaplotig	exon	34089581	34089634	100	+	.	Parent=comp150167_c0_seq1.mrna1;Target=comp150167_c0_seq1 1 54 -
ChrX	stalkie_big_nohaplotig	CDS	34087697	34087829	.	+	0	Parent=comp150167_c0_seq1.mrna1;Target=comp150167_c0_seq1 262 394 .
ChrX	stalkie_big_nohaplotig	CDS	34089274	34089480	.	+	2	Parent=comp150167_c0_seq1.mrna1;Target=comp150167_c0_seq1 55 261 .
ChrX	stalkie_big_nohaplotig	CDS	34089581	34089633	.	+	2	Parent=comp150167_c0_seq1.mrna1;Target=comp150167_c0_seq1 2 54 .
ChrX	gffcl	locus	34095243	34096381	.	.	.	ID=RLOC_00002039;geneIDs=comp105213_c0_seq1.path1,comp115836_c0_seq1.path1,comp153156_c0_seq1.path1;transcripts=comp115836_c0_seq1.mrna1,comp153156_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34095243	34095520	.	-	.	ID=comp115836_c0_seq1.mrna1;geneID=comp115836_c0_seq1.path1;Name=comp115836_c0_seq1;Dir=indeterminatecoverage=93.3;identity=98.9;matches=275;mismatches=3;indels=0;unknowns=0;Target=comp115836_c0_seq1 278 1 .;CDS_Target=comp115836_c0_seq1 228 154 .;locus=RLOC_00002039
ChrX	stalkie_big_nohaplotig	exon	34095243	34095520	98	-	.	Parent=comp115836_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	34095293	34095367	.	-	0	Parent=comp115836_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34095686	34096381	.	+	.	ID=comp153156_c0_seq1.mrna1;geneID=comp153156_c0_seq1.path1;Name=comp153156_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=688;mismatches=6;indels=5;unknowns=0;Target=comp153156_c0_seq1 697 1 .;CDS_Target=comp153156_c0_seq1 483 376 .;locus=RLOC_00002039
ChrX	stalkie_big_nohaplotig	exon	34095686	34096381	98	+	.	Parent=comp153156_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	34096061	34096168	.	+	0	Parent=comp153156_c0_seq1.mrna1
ChrX	gffcl	locus	34097269	34098697	.	-	.	ID=RLOC_00002040;geneIDs=comp161728_c1_seq1.path1;transcripts=comp161728_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34097269	34098697	.	-	.	ID=comp161728_c1_seq1.mrna1;geneID=comp161728_c1_seq1.path1;Name=comp161728_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1425;mismatches=4;indels=2;unknowns=0;Target=comp161728_c1_seq1 1431 1 .;CDS_Target=comp161728_c1_seq1 964 623 .;locus=RLOC_00002040
ChrX	stalkie_big_nohaplotig	exon	34097269	34098697	99	-	.	Parent=comp161728_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	34097734	34098075	.	-	0	Parent=comp161728_c1_seq1.mrna1
ChrX	gffcl	locus	34099164	34099427	.	+	.	ID=RLOC_00002041;geneIDs=comp150633_c2_seq1.path1;transcripts=comp150633_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34099164	34099427	.	+	.	ID=comp150633_c2_seq1.mrna1;geneID=comp150633_c2_seq1.path1;Name=comp150633_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=262;mismatches=2;indels=0;unknowns=0;Target=comp150633_c2_seq1 264 1 .;CDS_Target=comp150633_c2_seq1 161 3 .;locus=RLOC_00002041
ChrX	stalkie_big_nohaplotig	exon	34099164	34099427	99	+	.	Parent=comp150633_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	34099166	34099324	.	+	0	Parent=comp150633_c2_seq1.mrna1
ChrX	gffcl	locus	34110808	34114020	.	-	.	ID=RLOC_00002043;geneIDs=FBgn0032298.1.path1;transcripts=FBgn0032298.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34110808	34114020	.	-	.	ID=FBgn0032298.1.mrna1;geneID=FBgn0032298.1.path1;Name=FBgn0032298.1;Dir=sensecoverage=100.0;identity=99.8;matches=1266;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002043
ChrX	stalkie_big_nohaplotig	exon	34110808	34110958	98	-	.	Parent=FBgn0032298.1.mrna1;Target=FBgn0032298.1 1119 1269 +
ChrX	stalkie_big_nohaplotig	exon	34112629	34112761	100	-	.	Parent=FBgn0032298.1.mrna1;Target=FBgn0032298.1 986 1118 +
ChrX	stalkie_big_nohaplotig	exon	34112832	34113078	100	-	.	Parent=FBgn0032298.1.mrna1;Target=FBgn0032298.1 739 985 +
ChrX	stalkie_big_nohaplotig	exon	34113145	34113203	100	-	.	Parent=FBgn0032298.1.mrna1;Target=FBgn0032298.1 680 738 +
ChrX	stalkie_big_nohaplotig	exon	34113281	34113894	100	-	.	Parent=FBgn0032298.1.mrna1;Target=FBgn0032298.1 66 679 +
ChrX	stalkie_big_nohaplotig	exon	34113956	34114020	100	-	.	Parent=FBgn0032298.1.mrna1;Target=FBgn0032298.1 1 65 +
ChrX	stalkie_big_nohaplotig	CDS	34110808	34110958	.	-	1	Parent=FBgn0032298.1.mrna1;Target=FBgn0032298.1 1119 1269 +
ChrX	stalkie_big_nohaplotig	CDS	34112629	34112761	.	-	2	Parent=FBgn0032298.1.mrna1;Target=FBgn0032298.1 986 1118 +
ChrX	stalkie_big_nohaplotig	CDS	34112832	34113078	.	-	0	Parent=FBgn0032298.1.mrna1;Target=FBgn0032298.1 739 985 +
ChrX	stalkie_big_nohaplotig	CDS	34113145	34113203	.	-	2	Parent=FBgn0032298.1.mrna1;Target=FBgn0032298.1 680 738 +
ChrX	stalkie_big_nohaplotig	CDS	34113281	34113894	.	-	1	Parent=FBgn0032298.1.mrna1;Target=FBgn0032298.1 66 679 +
ChrX	stalkie_big_nohaplotig	CDS	34113956	34114020	.	-	0	Parent=FBgn0032298.1.mrna1;Target=FBgn0032298.1 1 65 +
ChrX	gffcl	locus	34124822	34125136	.	+	.	ID=RLOC_00002044;geneIDs=FBgn0032299.1.path1;transcripts=FBgn0032299.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34124822	34125136	.	+	.	ID=FBgn0032299.1.mrna1;geneID=FBgn0032299.1.path1;Name=FBgn0032299.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=315;mismatches=0;indels=0;unknowns=0;Target=FBgn0032299.1 315 1 .;locus=RLOC_00002044
ChrX	stalkie_big_nohaplotig	exon	34124822	34125136	100	+	.	Parent=FBgn0032299.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	34124822	34125136	.	+	0	Parent=FBgn0032299.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34234487	34393277	.	-	.	ID=comp153221_c0_seq1.mrna1;geneID=comp153221_c0_seq1.path1;Name=comp153221_c0_seq1;Dir=indeterminatecoverage=67.8;identity=94.5;matches=1060;mismatches=40;indels=22;unknowns=0;Target=comp153221_c0_seq1 1315 1067 .;locus=RLOC_00002045
ChrX	stalkie_big_nohaplotig	exon	34234487	34235336	99	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 1671 822 .
ChrX	stalkie_big_nohaplotig	exon	34250812	34250819	100	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 821 814 .
ChrX	stalkie_big_nohaplotig	exon	34258485	34258486	100	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 813 812 .
ChrX	stalkie_big_nohaplotig	exon	34262297	34262301	100	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 811 807 .
ChrX	stalkie_big_nohaplotig	exon	34264906	34264913	100	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 806 799 .
ChrX	stalkie_big_nohaplotig	exon	34265070	34265109	65	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 798 761 .
ChrX	stalkie_big_nohaplotig	exon	34269649	34269656	100	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 760 753 .
ChrX	stalkie_big_nohaplotig	exon	34276115	34276119	100	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 752 748 .
ChrX	stalkie_big_nohaplotig	exon	34276121	34276128	100	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 724 717 .
ChrX	stalkie_big_nohaplotig	exon	34278564	34278568	100	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 716 712 .
ChrX	stalkie_big_nohaplotig	exon	34285409	34285414	100	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 711 706 .
ChrX	stalkie_big_nohaplotig	exon	34299520	34299561	57	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 705 654 .
ChrX	stalkie_big_nohaplotig	exon	34304759	34304763	100	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 653 649 .
ChrX	stalkie_big_nohaplotig	exon	34310276	34310280	100	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 648 644 .
ChrX	stalkie_big_nohaplotig	exon	34313828	34313832	100	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 643 639 .
ChrX	stalkie_big_nohaplotig	exon	34324445	34324447	100	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 638 636 .
ChrX	stalkie_big_nohaplotig	exon	34335217	34335246	60	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 635 610 .
ChrX	stalkie_big_nohaplotig	exon	34356018	34356020	100	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 609 607 .
ChrX	stalkie_big_nohaplotig	exon	34363230	34363238	88	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 606 598 .
ChrX	stalkie_big_nohaplotig	exon	34364136	34364140	60	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 597 593 .
ChrX	stalkie_big_nohaplotig	exon	34364650	34364665	75	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 592 578 .
ChrX	stalkie_big_nohaplotig	exon	34367899	34367906	100	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 577 570 .
ChrX	stalkie_big_nohaplotig	exon	34372103	34372108	100	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 569 564 .
ChrX	stalkie_big_nohaplotig	exon	34373061	34373067	100	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 563 557 .
ChrX	stalkie_big_nohaplotig	exon	34379904	34379911	100	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 556 549 .
ChrX	stalkie_big_nohaplotig	exon	34393263	34393277	66	-	.	Parent=comp153221_c0_seq1.mrna1;Target=comp153221_c0_seq1 548 539 .
ChrX	stalkie_big_nohaplotig	CDS	34234843	34235091	.	-	0	Parent=comp153221_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34302131	34386890	.	-	.	ID=FBgn0011676.1.mrna1;geneID=FBgn0011676.1.path1;Name=FBgn0011676.1;Dir=sensecoverage=100.0;identity=100.0;matches=4048;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002045
ChrX	stalkie_big_nohaplotig	exon	34302131	34302235	100	-	.	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 3946 4050 +
ChrX	stalkie_big_nohaplotig	exon	34303005	34303071	100	-	.	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 3879 3945 +
ChrX	stalkie_big_nohaplotig	exon	34309010	34309134	100	-	.	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 3754 3878 +
ChrX	stalkie_big_nohaplotig	exon	34309479	34310618	100	-	.	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 2614 3753 +
ChrX	stalkie_big_nohaplotig	exon	34310993	34311167	100	-	.	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 2439 2613 +
ChrX	stalkie_big_nohaplotig	exon	34314304	34314468	100	-	.	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 2274 2438 +
ChrX	stalkie_big_nohaplotig	exon	34329256	34329320	100	-	.	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 2209 2273 +
ChrX	stalkie_big_nohaplotig	exon	34329764	34329868	100	-	.	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 2104 2208 +
ChrX	stalkie_big_nohaplotig	exon	34332989	34333133	100	-	.	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 1959 2103 +
ChrX	stalkie_big_nohaplotig	exon	34342485	34342694	100	-	.	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 1749 1958 +
ChrX	stalkie_big_nohaplotig	exon	34345736	34345917	100	-	.	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 1567 1748 +
ChrX	stalkie_big_nohaplotig	exon	34347840	34348014	100	-	.	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 1392 1566 +
ChrX	stalkie_big_nohaplotig	exon	34352859	34352998	100	-	.	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 1252 1391 +
ChrX	stalkie_big_nohaplotig	exon	34353718	34353859	100	-	.	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 1110 1251 +
ChrX	stalkie_big_nohaplotig	exon	34359630	34359721	100	-	.	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 1018 1109 +
ChrX	stalkie_big_nohaplotig	exon	34366858	34367020	99	-	.	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 855 1017 +
ChrX	stalkie_big_nohaplotig	exon	34367784	34367920	100	-	.	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 718 854 +
ChrX	stalkie_big_nohaplotig	exon	34386174	34386890	99	-	.	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 1 717 +
ChrX	stalkie_big_nohaplotig	CDS	34302131	34302235	.	-	0	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 3946 4050 +
ChrX	stalkie_big_nohaplotig	CDS	34303005	34303071	.	-	1	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 3879 3945 +
ChrX	stalkie_big_nohaplotig	CDS	34309010	34309134	.	-	0	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 3754 3878 +
ChrX	stalkie_big_nohaplotig	CDS	34309479	34310618	.	-	0	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 2614 3753 +
ChrX	stalkie_big_nohaplotig	CDS	34310993	34311167	.	-	1	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 2439 2613 +
ChrX	stalkie_big_nohaplotig	CDS	34314304	34314468	.	-	1	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 2274 2438 +
ChrX	stalkie_big_nohaplotig	CDS	34329256	34329320	.	-	0	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 2209 2273 +
ChrX	stalkie_big_nohaplotig	CDS	34329764	34329868	.	-	0	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 2104 2208 +
ChrX	stalkie_big_nohaplotig	CDS	34332989	34333133	.	-	1	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 1959 2103 +
ChrX	stalkie_big_nohaplotig	CDS	34342485	34342694	.	-	1	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 1749 1958 +
ChrX	stalkie_big_nohaplotig	CDS	34345736	34345917	.	-	0	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 1567 1748 +
ChrX	stalkie_big_nohaplotig	CDS	34347840	34348014	.	-	1	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 1392 1566 +
ChrX	stalkie_big_nohaplotig	CDS	34352859	34352998	.	-	0	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 1252 1391 +
ChrX	stalkie_big_nohaplotig	CDS	34353718	34353859	.	-	1	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 1110 1251 +
ChrX	stalkie_big_nohaplotig	CDS	34359630	34359721	.	-	0	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 1018 1109 +
ChrX	stalkie_big_nohaplotig	CDS	34366858	34367020	.	-	1	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 855 1017 +
ChrX	stalkie_big_nohaplotig	CDS	34367784	34367920	.	-	0	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 718 854 +
ChrX	stalkie_big_nohaplotig	CDS	34386174	34386890	.	-	0	Parent=FBgn0011676.1.mrna1;Target=FBgn0011676.1 1 717 +
ChrX	gffcl	locus	34214269	34221453	.	-	.	ID=RLOC_00002046;geneIDs=comp152468_c0_seq1.path1;transcripts=comp152468_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34214269	34221453	.	-	.	ID=comp152468_c0_seq1.mrna1;geneID=comp152468_c0_seq1.path1;Name=comp152468_c0_seq1;Dir=antisensecoverage=99.9;identity=99.8;matches=927;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002046
ChrX	stalkie_big_nohaplotig	exon	34214269	34214683	100	-	.	Parent=comp152468_c0_seq1.mrna1;Target=comp152468_c0_seq1 1 415 -
ChrX	stalkie_big_nohaplotig	exon	34214774	34214816	100	-	.	Parent=comp152468_c0_seq1.mrna1;Target=comp152468_c0_seq1 416 458 -
ChrX	stalkie_big_nohaplotig	exon	34220922	34220951	100	-	.	Parent=comp152468_c0_seq1.mrna1;Target=comp152468_c0_seq1 459 488 -
ChrX	stalkie_big_nohaplotig	exon	34221013	34221453	99	-	.	Parent=comp152468_c0_seq1.mrna1;Target=comp152468_c0_seq1 489 929 -
ChrX	stalkie_big_nohaplotig	CDS	34214386	34214683	.	-	1	Parent=comp152468_c0_seq1.mrna1;Target=comp152468_c0_seq1 118 415 .
ChrX	stalkie_big_nohaplotig	CDS	34214774	34214816	.	-	2	Parent=comp152468_c0_seq1.mrna1;Target=comp152468_c0_seq1 416 458 .
ChrX	stalkie_big_nohaplotig	CDS	34220922	34220951	.	-	2	Parent=comp152468_c0_seq1.mrna1;Target=comp152468_c0_seq1 459 488 .
ChrX	stalkie_big_nohaplotig	CDS	34221013	34221304	.	-	0	Parent=comp152468_c0_seq1.mrna1;Target=comp152468_c0_seq1 489 780 .
ChrX	gffcl	locus	34223276	34223596	.	+	.	ID=RLOC_00002047;geneIDs=comp723610_c0_seq1.path1;transcripts=comp723610_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34223276	34223596	.	+	.	ID=comp723610_c0_seq1.mrna1;geneID=comp723610_c0_seq1.path1;Name=comp723610_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=320;mismatches=1;indels=0;unknowns=0;Target=comp723610_c0_seq1 322 2 .;CDS_Target=comp723610_c0_seq1 50 3 .;locus=RLOC_00002047
ChrX	stalkie_big_nohaplotig	exon	34223276	34223596	99	+	.	Parent=comp723610_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	34223277	34223324	.	+	0	Parent=comp723610_c0_seq1.mrna1
ChrX	gffcl	locus	34223811	34224036	.	-	.	ID=RLOC_00002048;geneIDs=comp145101_c0_seq1.path1;transcripts=comp145101_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34223811	34224036	.	-	.	ID=comp145101_c0_seq1.mrna1;geneID=comp145101_c0_seq1.path1;Name=comp145101_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=226;mismatches=0;indels=0;unknowns=0;Target=comp145101_c0_seq1 226 1 .;CDS_Target=comp145101_c0_seq1 226 80 .;locus=RLOC_00002048
ChrX	stalkie_big_nohaplotig	exon	34223811	34224036	100	-	.	Parent=comp145101_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	34223811	34223957	.	-	0	Parent=comp145101_c0_seq1.mrna1
ChrX	gffcl	locus	34293307	34294148	.	+	.	ID=RLOC_00002050;geneIDs=comp155519_c0_seq1.path1;transcripts=comp155519_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34293307	34294148	.	+	.	ID=comp155519_c0_seq1.mrna1;geneID=comp155519_c0_seq1.path1;Name=comp155519_c0_seq1;Dir=indeterminatecoverage=94.8;identity=99.9;matches=841;mismatches=1;indels=0;unknowns=0;Target=comp155519_c0_seq1 887 46 .;CDS_Target=comp155519_c0_seq1 652 464 .;locus=RLOC_00002050
ChrX	stalkie_big_nohaplotig	exon	34293307	34294148	99	+	.	Parent=comp155519_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	34293725	34293913	.	+	0	Parent=comp155519_c0_seq1.mrna1
ChrX	gffcl	locus	34298087	34516657	.	-	.	ID=RLOC_00002051;geneIDs=comp155076_c0_seq1.path1;transcripts=comp155076_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34298087	34516657	.	-	.	ID=comp155076_c0_seq1.mrna1;geneID=comp155076_c0_seq1.path1;Name=comp155076_c0_seq1;Dir=indeterminatecoverage=73.1;identity=100.0;matches=424;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002051
ChrX	stalkie_big_nohaplotig	exon	34298087	34298488	100	-	.	Parent=comp155076_c0_seq1.mrna1;Target=comp155076_c0_seq1 580 179 .
ChrX	stalkie_big_nohaplotig	exon	34511214	34511220	100	-	.	Parent=comp155076_c0_seq1.mrna1;Target=comp155076_c0_seq1 178 172 .
ChrX	stalkie_big_nohaplotig	exon	34515391	34515393	100	-	.	Parent=comp155076_c0_seq1.mrna1;Target=comp155076_c0_seq1 171 169 .
ChrX	stalkie_big_nohaplotig	exon	34516646	34516657	100	-	.	Parent=comp155076_c0_seq1.mrna1;Target=comp155076_c0_seq1 168 157 .
ChrX	stalkie_big_nohaplotig	CDS	34298455	34298488	.	-	1	Parent=comp155076_c0_seq1.mrna1;Target=comp155076_c0_seq1 212 179 .
ChrX	stalkie_big_nohaplotig	CDS	34511214	34511220	.	-	2	Parent=comp155076_c0_seq1.mrna1;Target=comp155076_c0_seq1 178 172 .
ChrX	stalkie_big_nohaplotig	CDS	34515391	34515393	.	-	2	Parent=comp155076_c0_seq1.mrna1;Target=comp155076_c0_seq1 171 169 .
ChrX	stalkie_big_nohaplotig	CDS	34516646	34516655	.	-	0	Parent=comp155076_c0_seq1.mrna1;Target=comp155076_c0_seq1 168 159 .
ChrX	gffcl	locus	34305335	34305456	.	+	.	ID=RLOC_00002052;geneIDs=comp145913_c0_seq1.path1;transcripts=comp145913_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34305335	34305456	.	+	.	ID=comp145913_c0_seq1.mrna1;geneID=comp145913_c0_seq1.path1;Name=comp145913_c0_seq1;Dir=indeterminatecoverage=37.8;identity=99.2;matches=121;mismatches=1;indels=0;unknowns=0;Target=comp145913_c0_seq1 122 1 .;CDS_Target=comp145913_c0_seq1 44 3 .;locus=RLOC_00002052
ChrX	stalkie_big_nohaplotig	exon	34305335	34305456	99	+	.	Parent=comp145913_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	34305337	34305378	.	+	0	Parent=comp145913_c0_seq1.mrna1
ChrX	gffcl	locus	34350884	34351429	.	-	.	ID=RLOC_00002053;geneIDs=comp156702_c0_seq1.path2;transcripts=comp156702_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	34350884	34351429	.	-	.	ID=comp156702_c0_seq1.mrna2;geneID=comp156702_c0_seq1.path2;Name=comp156702_c0_seq1;Dir=antisensecoverage=97.0;identity=97.8;matches=449;mismatches=9;indels=1;unknowns=0;Target=comp156702_c0_seq1 283 348 .;locus=RLOC_00002053
ChrX	stalkie_big_nohaplotig	exon	34350884	34351228	97	-	.	Parent=comp156702_c0_seq1.mrna2;Target=comp156702_c0_seq1 3 348 -
ChrX	stalkie_big_nohaplotig	exon	34351317	34351429	98	-	.	Parent=comp156702_c0_seq1.mrna2;Target=comp156702_c0_seq1 349 461 -
ChrX	stalkie_big_nohaplotig	CDS	34351164	34351228	.	-	0	Parent=comp156702_c0_seq1.mrna2
ChrX	gffcl	locus	34360444	34360964	.	+	.	ID=RLOC_00002054;geneIDs=comp156702_c0_seq1.path1;transcripts=comp156702_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34360444	34360964	.	+	.	ID=comp156702_c0_seq1.mrna1;geneID=comp156702_c0_seq1.path1;Name=comp156702_c0_seq1;Dir=antisensecoverage=92.8;identity=99.5;matches=437;mismatches=1;indels=1;unknowns=0;Target=comp156702_c0_seq1 283 348 .;locus=RLOC_00002054
ChrX	stalkie_big_nohaplotig	exon	34360444	34360556	100	+	.	Parent=comp156702_c0_seq1.mrna1;Target=comp156702_c0_seq1 349 461 -
ChrX	stalkie_big_nohaplotig	exon	34360640	34360964	99	+	.	Parent=comp156702_c0_seq1.mrna1;Target=comp156702_c0_seq1 23 348 -
ChrX	stalkie_big_nohaplotig	CDS	34360640	34360704	.	+	0	Parent=comp156702_c0_seq1.mrna1
ChrX	gffcl	locus	34370526	34371240	.	+	.	ID=RLOC_00002055;geneIDs=comp135473_c0_seq1.path1;transcripts=comp135473_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34370526	34371240	.	+	.	ID=comp135473_c0_seq1.mrna1;geneID=comp135473_c0_seq1.path1;Name=comp135473_c0_seq1;Dir=sensecoverage=99.1;identity=100.0;matches=658;mismatches=0;indels=0;unknowns=0;Target=comp135473_c0_seq1 194 484 +;locus=RLOC_00002055
ChrX	stalkie_big_nohaplotig	exon	34370526	34371015	100	+	.	Parent=comp135473_c0_seq1.mrna1;Target=comp135473_c0_seq1 7 496 +
ChrX	stalkie_big_nohaplotig	exon	34371073	34371240	100	+	.	Parent=comp135473_c0_seq1.mrna1;Target=comp135473_c0_seq1 497 664 +
ChrX	stalkie_big_nohaplotig	CDS	34370713	34371003	.	+	0	Parent=comp135473_c0_seq1.mrna1
ChrX	gffcl	locus	34453959	34455061	.	-	.	ID=RLOC_00002057;geneIDs=comp143961_c0_seq1.path1;transcripts=comp143961_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34453959	34455061	.	-	.	ID=comp143961_c0_seq1.mrna1;geneID=comp143961_c0_seq1.path1;Name=comp143961_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=932;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002057
ChrX	stalkie_big_nohaplotig	exon	34453959	34453986	96	-	.	Parent=comp143961_c0_seq1.mrna1;Target=comp143961_c0_seq1 1 28 -
ChrX	stalkie_big_nohaplotig	exon	34454083	34454361	100	-	.	Parent=comp143961_c0_seq1.mrna1;Target=comp143961_c0_seq1 29 307 -
ChrX	stalkie_big_nohaplotig	exon	34454435	34455061	99	-	.	Parent=comp143961_c0_seq1.mrna1;Target=comp143961_c0_seq1 308 934 -
ChrX	stalkie_big_nohaplotig	CDS	34454353	34454361	.	-	0	Parent=comp143961_c0_seq1.mrna1;Target=comp143961_c0_seq1 299 307 .
ChrX	stalkie_big_nohaplotig	CDS	34454435	34454830	.	-	0	Parent=comp143961_c0_seq1.mrna1;Target=comp143961_c0_seq1 308 703 .
ChrX	gffcl	locus	34470830	34481693	.	.	.	ID=RLOC_00002059;geneIDs=FBgn0024227.1.path1,comp145929_c0_seq1.path1,comp149699_c0_seq1.path1,comp161452_c0_seq1.path1;transcripts=comp161452_c0_seq1.mrna1,FBgn0024227.1.mrna1,comp149699_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34470830	34480445	.	+	.	ID=comp161452_c0_seq1.mrna1;geneID=comp161452_c0_seq1.path1;Name=comp161452_c0_seq1;Dir=sensecoverage=98.2;identity=99.3;matches=1425;mismatches=10;indels=0;unknowns=0;locus=RLOC_00002059
ChrX	stalkie_big_nohaplotig	exon	34470830	34471249	99	+	.	Parent=comp161452_c0_seq1.mrna1;Target=comp161452_c0_seq1 26 445 +
ChrX	stalkie_big_nohaplotig	exon	34478117	34478181	100	+	.	Parent=comp161452_c0_seq1.mrna1;Target=comp161452_c0_seq1 446 510 +
ChrX	stalkie_big_nohaplotig	exon	34478252	34478443	99	+	.	Parent=comp161452_c0_seq1.mrna1;Target=comp161452_c0_seq1 511 702 +
ChrX	stalkie_big_nohaplotig	exon	34478528	34478821	99	+	.	Parent=comp161452_c0_seq1.mrna1;Target=comp161452_c0_seq1 703 996 +
ChrX	stalkie_big_nohaplotig	exon	34479926	34480157	97	+	.	Parent=comp161452_c0_seq1.mrna1;Target=comp161452_c0_seq1 997 1228 +
ChrX	stalkie_big_nohaplotig	exon	34480214	34480445	99	+	.	Parent=comp161452_c0_seq1.mrna1;Target=comp161452_c0_seq1 1229 1460 +
ChrX	stalkie_big_nohaplotig	CDS	34471172	34471249	.	+	0	Parent=comp161452_c0_seq1.mrna1;Target=comp161452_c0_seq1 368 445 +
ChrX	stalkie_big_nohaplotig	CDS	34478117	34478181	.	+	0	Parent=comp161452_c0_seq1.mrna1;Target=comp161452_c0_seq1 446 510 +
ChrX	stalkie_big_nohaplotig	CDS	34478252	34478443	.	+	1	Parent=comp161452_c0_seq1.mrna1;Target=comp161452_c0_seq1 511 702 +
ChrX	stalkie_big_nohaplotig	CDS	34478528	34478821	.	+	1	Parent=comp161452_c0_seq1.mrna1;Target=comp161452_c0_seq1 703 996 +
ChrX	stalkie_big_nohaplotig	CDS	34479926	34480157	.	+	1	Parent=comp161452_c0_seq1.mrna1;Target=comp161452_c0_seq1 997 1228 +
ChrX	stalkie_big_nohaplotig	CDS	34480214	34480330	.	+	0	Parent=comp161452_c0_seq1.mrna1;Target=comp161452_c0_seq1 1229 1345 +
ChrX	stalkie_big_nohaplotig	mRNA	34478028	34480327	.	+	.	ID=FBgn0024227.1.mrna1;geneID=FBgn0024227.1.path1;Name=FBgn0024227.1;Dir=sensecoverage=99.3;identity=96.5;matches=957;mismatches=29;indels=6;unknowns=0;locus=RLOC_00002059
ChrX	stalkie_big_nohaplotig	exon	34478028	34478181	83	+	.	Parent=FBgn0024227.1.mrna1;Target=FBgn0024227.1 8 167 +
ChrX	stalkie_big_nohaplotig	exon	34478252	34478443	98	+	.	Parent=FBgn0024227.1.mrna1;Target=FBgn0024227.1 168 359 +
ChrX	stalkie_big_nohaplotig	exon	34478528	34478821	99	+	.	Parent=FBgn0024227.1.mrna1;Target=FBgn0024227.1 360 653 +
ChrX	stalkie_big_nohaplotig	exon	34479926	34480157	97	+	.	Parent=FBgn0024227.1.mrna1;Target=FBgn0024227.1 654 885 +
ChrX	stalkie_big_nohaplotig	exon	34480214	34480327	100	+	.	Parent=FBgn0024227.1.mrna1;Target=FBgn0024227.1 886 999 +
ChrX	stalkie_big_nohaplotig	CDS	34478030	34478181	.	+	0	Parent=FBgn0024227.1.mrna1;Target=FBgn0024227.1 10 167 +
ChrX	stalkie_big_nohaplotig	CDS	34478252	34478443	.	+	1	Parent=FBgn0024227.1.mrna1;Target=FBgn0024227.1 168 359 +
ChrX	stalkie_big_nohaplotig	CDS	34478528	34478821	.	+	1	Parent=FBgn0024227.1.mrna1;Target=FBgn0024227.1 360 653 +
ChrX	stalkie_big_nohaplotig	CDS	34479926	34480157	.	+	1	Parent=FBgn0024227.1.mrna1;Target=FBgn0024227.1 654 885 +
ChrX	stalkie_big_nohaplotig	CDS	34480214	34480327	.	+	0	Parent=FBgn0024227.1.mrna1;Target=FBgn0024227.1 886 999 +
ChrX	stalkie_big_nohaplotig	mRNA	34481050	34481693	.	-	.	ID=comp149699_c0_seq1.mrna1;geneID=comp149699_c0_seq1.path1;Name=comp149699_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=644;mismatches=0;indels=1;unknowns=0;Target=comp149699_c0_seq1 645 1 .;CDS_Target=comp149699_c0_seq1 372 328 .;locus=RLOC_00002059
ChrX	stalkie_big_nohaplotig	exon	34481050	34481693	99	-	.	Parent=comp149699_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	34481323	34481367	.	-	0	Parent=comp149699_c0_seq1.mrna1
ChrX	gffcl	locus	34482186	34490426	.	-	.	ID=RLOC_00002060;geneIDs=FBgn0004363.1.path1,comp132658_c0_seq1.path1;transcripts=FBgn0004363.1.mrna1,comp132658_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34482186	34484690	.	-	.	ID=FBgn0004363.1.mrna1;geneID=FBgn0004363.1.path1;Name=FBgn0004363.1;Dir=sensecoverage=100.0;identity=100.0;matches=1032;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002060
ChrX	stalkie_big_nohaplotig	exon	34482186	34482483	100	-	.	Parent=FBgn0004363.1.mrna1;Target=FBgn0004363.1 735 1032 +
ChrX	stalkie_big_nohaplotig	exon	34482553	34482780	100	-	.	Parent=FBgn0004363.1.mrna1;Target=FBgn0004363.1 507 734 +
ChrX	stalkie_big_nohaplotig	exon	34483821	34484140	100	-	.	Parent=FBgn0004363.1.mrna1;Target=FBgn0004363.1 187 506 +
ChrX	stalkie_big_nohaplotig	exon	34484505	34484690	100	-	.	Parent=FBgn0004363.1.mrna1;Target=FBgn0004363.1 1 186 +
ChrX	stalkie_big_nohaplotig	CDS	34482186	34482483	.	-	1	Parent=FBgn0004363.1.mrna1;Target=FBgn0004363.1 735 1032 +
ChrX	stalkie_big_nohaplotig	CDS	34482553	34482780	.	-	1	Parent=FBgn0004363.1.mrna1;Target=FBgn0004363.1 507 734 +
ChrX	stalkie_big_nohaplotig	CDS	34483821	34484140	.	-	0	Parent=FBgn0004363.1.mrna1;Target=FBgn0004363.1 187 506 +
ChrX	stalkie_big_nohaplotig	CDS	34484505	34484690	.	-	0	Parent=FBgn0004363.1.mrna1;Target=FBgn0004363.1 1 186 +
ChrX	stalkie_big_nohaplotig	mRNA	34484118	34490426	.	-	.	ID=comp132658_c0_seq1.mrna1;geneID=comp132658_c0_seq1.path1;Name=comp132658_c0_seq1;Dir=antisensecoverage=97.5;identity=98.5;matches=470;mismatches=4;indels=3;unknowns=0;Target=comp132658_c0_seq1 397 474 .;locus=RLOC_00002060
ChrX	stalkie_big_nohaplotig	exon	34484118	34484140	100	-	.	Parent=comp132658_c0_seq1.mrna1;Target=comp132658_c0_seq1 1 23 -
ChrX	stalkie_big_nohaplotig	exon	34489974	34490426	98	-	.	Parent=comp132658_c0_seq1.mrna1;Target=comp132658_c0_seq1 24 475 -
ChrX	stalkie_big_nohaplotig	CDS	34490346	34490425	.	-	0	Parent=comp132658_c0_seq1.mrna1
ChrX	gffcl	locus	34489260	34489596	.	+	.	ID=RLOC_00002061;geneIDs=comp141882_c0_seq1.path1;transcripts=comp141882_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34489260	34489596	.	+	.	ID=comp141882_c0_seq1.mrna1;geneID=comp141882_c0_seq1.path1;Name=comp141882_c0_seq1;Dir=indeterminatecoverage=96.5;identity=98.5;matches=332;mismatches=0;indels=5;unknowns=0;Target=comp141882_c0_seq1 332 1 .;CDS_Target=comp141882_c0_seq1 50 3 .;locus=RLOC_00002061
ChrX	stalkie_big_nohaplotig	exon	34489260	34489596	98	+	.	Parent=comp141882_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	34489262	34489309	.	+	0	Parent=comp141882_c0_seq1.mrna1
ChrX	gffcl	locus	34504249	34505835	.	-	.	ID=RLOC_00002063;geneIDs=FBgn0086912.1.path1;transcripts=FBgn0086912.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34504249	34505835	.	-	.	ID=FBgn0086912.1.mrna1;geneID=FBgn0086912.1.path1;Name=FBgn0086912.1;Dir=sensecoverage=100.0;identity=99.8;matches=1524;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002063
ChrX	stalkie_big_nohaplotig	exon	34504249	34504839	99	-	.	Parent=FBgn0086912.1.mrna1;Target=FBgn0086912.1 937 1527 +
ChrX	stalkie_big_nohaplotig	exon	34504900	34505835	100	-	.	Parent=FBgn0086912.1.mrna1;Target=FBgn0086912.1 1 936 +
ChrX	stalkie_big_nohaplotig	CDS	34504249	34504839	.	-	0	Parent=FBgn0086912.1.mrna1;Target=FBgn0086912.1 937 1527 +
ChrX	stalkie_big_nohaplotig	CDS	34504900	34505835	.	-	0	Parent=FBgn0086912.1.mrna1;Target=FBgn0086912.1 1 936 +
ChrX	gffcl	locus	34508596	34509408	.	+	.	ID=RLOC_00002064;geneIDs=comp149232_c0_seq1.path1;transcripts=comp149232_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34508596	34509408	.	+	.	ID=comp149232_c0_seq1.mrna1;geneID=comp149232_c0_seq1.path1;Name=comp149232_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=813;mismatches=0;indels=0;unknowns=0;Target=comp149232_c0_seq1 813 1 .;CDS_Target=comp149232_c0_seq1 813 535 .;locus=RLOC_00002064
ChrX	stalkie_big_nohaplotig	exon	34508596	34509408	100	+	.	Parent=comp149232_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	34509130	34509408	.	+	0	Parent=comp149232_c0_seq1.mrna1
ChrX	gffcl	locus	34509516	34510883	.	+	.	ID=RLOC_00002065;geneIDs=comp150604_c1_seq1.path1;transcripts=comp150604_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34509516	34510883	.	+	.	ID=comp150604_c1_seq1.mrna1;geneID=comp150604_c1_seq1.path1;Name=comp150604_c1_seq1;Dir=sensecoverage=99.5;identity=99.4;matches=1179;mismatches=4;indels=3;unknowns=0;Target=comp150604_c1_seq1 282 1130 +;locus=RLOC_00002065
ChrX	stalkie_big_nohaplotig	exon	34509516	34509630	100	+	.	Parent=comp150604_c1_seq1.mrna1;Target=comp150604_c1_seq1 1 115 +
ChrX	stalkie_big_nohaplotig	exon	34509691	34509844	100	+	.	Parent=comp150604_c1_seq1.mrna1;Target=comp150604_c1_seq1 116 269 +
ChrX	stalkie_big_nohaplotig	exon	34509967	34510883	99	+	.	Parent=comp150604_c1_seq1.mrna1;Target=comp150604_c1_seq1 270 1183 +
ChrX	stalkie_big_nohaplotig	CDS	34509979	34510827	.	+	0	Parent=comp150604_c1_seq1.mrna1
ChrX	gffcl	locus	34515866	34519449	.	-	.	ID=RLOC_00002066;geneIDs=FBgn0025608.1.path1;transcripts=FBgn0025608.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34515866	34519449	.	-	.	ID=FBgn0025608.1.mrna1;geneID=FBgn0025608.1.path1;Name=FBgn0025608.1;Dir=sensecoverage=100.0;identity=99.9;matches=1367;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002066
ChrX	stalkie_big_nohaplotig	exon	34515866	34516036	100	-	.	Parent=FBgn0025608.1.mrna1;Target=FBgn0025608.1 1198 1368 +
ChrX	stalkie_big_nohaplotig	exon	34517895	34518038	100	-	.	Parent=FBgn0025608.1.mrna1;Target=FBgn0025608.1 1054 1197 +
ChrX	stalkie_big_nohaplotig	exon	34518245	34518876	100	-	.	Parent=FBgn0025608.1.mrna1;Target=FBgn0025608.1 422 1053 +
ChrX	stalkie_big_nohaplotig	exon	34518967	34519252	99	-	.	Parent=FBgn0025608.1.mrna1;Target=FBgn0025608.1 136 421 +
ChrX	stalkie_big_nohaplotig	exon	34519315	34519449	100	-	.	Parent=FBgn0025608.1.mrna1;Target=FBgn0025608.1 1 135 +
ChrX	stalkie_big_nohaplotig	CDS	34515866	34516036	.	-	0	Parent=FBgn0025608.1.mrna1;Target=FBgn0025608.1 1198 1368 +
ChrX	stalkie_big_nohaplotig	CDS	34517895	34518038	.	-	0	Parent=FBgn0025608.1.mrna1;Target=FBgn0025608.1 1054 1197 +
ChrX	stalkie_big_nohaplotig	CDS	34518245	34518876	.	-	2	Parent=FBgn0025608.1.mrna1;Target=FBgn0025608.1 422 1053 +
ChrX	stalkie_big_nohaplotig	CDS	34518967	34519252	.	-	0	Parent=FBgn0025608.1.mrna1;Target=FBgn0025608.1 136 421 +
ChrX	stalkie_big_nohaplotig	CDS	34519315	34519449	.	-	0	Parent=FBgn0025608.1.mrna1;Target=FBgn0025608.1 1 135 +
ChrX	gffcl	locus	34522451	34522984	.	+	.	ID=RLOC_00002067;geneIDs=FBgn0031403.1.path1;transcripts=FBgn0031403.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34522451	34522984	.	+	.	ID=FBgn0031403.1.mrna1;geneID=FBgn0031403.1.path1;Name=FBgn0031403.1;Dir=sensecoverage=100.0;identity=100.0;matches=468;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002067
ChrX	stalkie_big_nohaplotig	exon	34522451	34522535	100	+	.	Parent=FBgn0031403.1.mrna1;Target=FBgn0031403.1 1 85 +
ChrX	stalkie_big_nohaplotig	exon	34522602	34522984	100	+	.	Parent=FBgn0031403.1.mrna1;Target=FBgn0031403.1 86 468 +
ChrX	stalkie_big_nohaplotig	CDS	34522451	34522535	.	+	0	Parent=FBgn0031403.1.mrna1;Target=FBgn0031403.1 1 85 +
ChrX	stalkie_big_nohaplotig	CDS	34522602	34522984	.	+	2	Parent=FBgn0031403.1.mrna1;Target=FBgn0031403.1 86 468 +
ChrX	gffcl	locus	34602778	34603733	.	+	.	ID=RLOC_00002068;geneIDs=ORF2258.path1;transcripts=ORF2258.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34602778	34603733	.	+	.	ID=ORF2258.mrna1;geneID=ORF2258.path1;Name=ORF2258;Dir=sensecoverage=100.0;identity=99.9;matches=887;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002068
ChrX	stalkie_big_nohaplotig	exon	34602778	34603366	100	+	.	Parent=ORF2258.mrna1;Target=ORF2258 1 589 +
ChrX	stalkie_big_nohaplotig	exon	34603435	34603733	99	+	.	Parent=ORF2258.mrna1;Target=ORF2258 590 888 +
ChrX	stalkie_big_nohaplotig	CDS	34602778	34603366	.	+	0	Parent=ORF2258.mrna1;Target=ORF2258 1 589 +
ChrX	stalkie_big_nohaplotig	CDS	34603435	34603733	.	+	2	Parent=ORF2258.mrna1;Target=ORF2258 590 888 +
ChrX	gffcl	locus	34632581	34635231	.	-	.	ID=RLOC_00002069;geneIDs=comp154467_c1_seq1.path1;transcripts=comp154467_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34632581	34635231	.	-	.	ID=comp154467_c1_seq1.mrna1;geneID=comp154467_c1_seq1.path1;Name=comp154467_c1_seq1;Dir=antisensecoverage=97.3;identity=99.3;matches=1813;mismatches=12;indels=0;unknowns=0;Target=comp154467_c1_seq1 910 975 .;locus=RLOC_00002069
ChrX	stalkie_big_nohaplotig	exon	34632581	34633182	99	-	.	Parent=comp154467_c1_seq1.mrna1;Target=comp154467_c1_seq1 17 618 -
ChrX	stalkie_big_nohaplotig	exon	34633249	34633806	99	-	.	Parent=comp154467_c1_seq1.mrna1;Target=comp154467_c1_seq1 619 1176 -
ChrX	stalkie_big_nohaplotig	exon	34634226	34634881	98	-	.	Parent=comp154467_c1_seq1.mrna1;Target=comp154467_c1_seq1 1177 1832 -
ChrX	stalkie_big_nohaplotig	exon	34635223	34635231	100	-	.	Parent=comp154467_c1_seq1.mrna1;Target=comp154467_c1_seq1 1836 1844 -
ChrX	stalkie_big_nohaplotig	CDS	34633540	34633605	.	-	0	Parent=comp154467_c1_seq1.mrna1
ChrX	gffcl	locus	34635163	34650622	.	+	.	ID=RLOC_00002070;geneIDs=ORF400.path1;transcripts=ORF400.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34635163	34650622	.	+	.	ID=ORF400.mrna1;geneID=ORF400.path1;Name=ORF400;Dir=sensecoverage=100.0;identity=100.0;matches=1893;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002070
ChrX	stalkie_big_nohaplotig	exon	34635163	34635219	100	+	.	Parent=ORF400.mrna1;Target=ORF400 1 57 +
ChrX	stalkie_big_nohaplotig	exon	34635802	34635834	100	+	.	Parent=ORF400.mrna1;Target=ORF400 58 90 +
ChrX	stalkie_big_nohaplotig	exon	34636832	34636891	100	+	.	Parent=ORF400.mrna1;Target=ORF400 91 150 +
ChrX	stalkie_big_nohaplotig	exon	34636961	34637035	100	+	.	Parent=ORF400.mrna1;Target=ORF400 151 225 +
ChrX	stalkie_big_nohaplotig	exon	34637964	34638065	100	+	.	Parent=ORF400.mrna1;Target=ORF400 226 327 +
ChrX	stalkie_big_nohaplotig	exon	34638117	34638194	100	+	.	Parent=ORF400.mrna1;Target=ORF400 328 405 +
ChrX	stalkie_big_nohaplotig	exon	34639132	34639218	100	+	.	Parent=ORF400.mrna1;Target=ORF400 406 492 +
ChrX	stalkie_big_nohaplotig	exon	34639292	34639426	100	+	.	Parent=ORF400.mrna1;Target=ORF400 493 627 +
ChrX	stalkie_big_nohaplotig	exon	34640415	34640522	100	+	.	Parent=ORF400.mrna1;Target=ORF400 628 735 +
ChrX	stalkie_big_nohaplotig	exon	34640583	34640660	100	+	.	Parent=ORF400.mrna1;Target=ORF400 736 813 +
ChrX	stalkie_big_nohaplotig	exon	34640985	34641056	100	+	.	Parent=ORF400.mrna1;Target=ORF400 814 885 +
ChrX	stalkie_big_nohaplotig	exon	34641120	34641206	100	+	.	Parent=ORF400.mrna1;Target=ORF400 886 972 +
ChrX	stalkie_big_nohaplotig	exon	34641715	34641747	100	+	.	Parent=ORF400.mrna1;Target=ORF400 973 1005 +
ChrX	stalkie_big_nohaplotig	exon	34641837	34641869	100	+	.	Parent=ORF400.mrna1;Target=ORF400 1006 1038 +
ChrX	stalkie_big_nohaplotig	exon	34641968	34642000	100	+	.	Parent=ORF400.mrna1;Target=ORF400 1039 1071 +
ChrX	stalkie_big_nohaplotig	exon	34643259	34643351	100	+	.	Parent=ORF400.mrna1;Target=ORF400 1072 1164 +
ChrX	stalkie_big_nohaplotig	exon	34643410	34643493	100	+	.	Parent=ORF400.mrna1;Target=ORF400 1165 1248 +
ChrX	stalkie_big_nohaplotig	exon	34644434	34644505	100	+	.	Parent=ORF400.mrna1;Target=ORF400 1249 1320 +
ChrX	stalkie_big_nohaplotig	exon	34645924	34646007	100	+	.	Parent=ORF400.mrna1;Target=ORF400 1321 1404 +
ChrX	stalkie_big_nohaplotig	exon	34647227	34647334	100	+	.	Parent=ORF400.mrna1;Target=ORF400 1405 1512 +
ChrX	stalkie_big_nohaplotig	exon	34649700	34649777	100	+	.	Parent=ORF400.mrna1;Target=ORF400 1513 1590 +
ChrX	stalkie_big_nohaplotig	exon	34649884	34649976	100	+	.	Parent=ORF400.mrna1;Target=ORF400 1591 1683 +
ChrX	stalkie_big_nohaplotig	exon	34650052	34650147	100	+	.	Parent=ORF400.mrna1;Target=ORF400 1684 1779 +
ChrX	stalkie_big_nohaplotig	exon	34650509	34650622	100	+	.	Parent=ORF400.mrna1;Target=ORF400 1780 1893 +
ChrX	stalkie_big_nohaplotig	CDS	34635163	34635219	.	+	0	Parent=ORF400.mrna1;Target=ORF400 1 57 +
ChrX	stalkie_big_nohaplotig	CDS	34635802	34635834	.	+	0	Parent=ORF400.mrna1;Target=ORF400 58 90 +
ChrX	stalkie_big_nohaplotig	CDS	34636832	34636891	.	+	0	Parent=ORF400.mrna1;Target=ORF400 91 150 +
ChrX	stalkie_big_nohaplotig	CDS	34636961	34637035	.	+	0	Parent=ORF400.mrna1;Target=ORF400 151 225 +
ChrX	stalkie_big_nohaplotig	CDS	34637964	34638065	.	+	0	Parent=ORF400.mrna1;Target=ORF400 226 327 +
ChrX	stalkie_big_nohaplotig	CDS	34638117	34638194	.	+	0	Parent=ORF400.mrna1;Target=ORF400 328 405 +
ChrX	stalkie_big_nohaplotig	CDS	34639132	34639218	.	+	0	Parent=ORF400.mrna1;Target=ORF400 406 492 +
ChrX	stalkie_big_nohaplotig	CDS	34639292	34639426	.	+	0	Parent=ORF400.mrna1;Target=ORF400 493 627 +
ChrX	stalkie_big_nohaplotig	CDS	34640415	34640522	.	+	0	Parent=ORF400.mrna1;Target=ORF400 628 735 +
ChrX	stalkie_big_nohaplotig	CDS	34640583	34640660	.	+	0	Parent=ORF400.mrna1;Target=ORF400 736 813 +
ChrX	stalkie_big_nohaplotig	CDS	34640985	34641056	.	+	0	Parent=ORF400.mrna1;Target=ORF400 814 885 +
ChrX	stalkie_big_nohaplotig	CDS	34641120	34641206	.	+	0	Parent=ORF400.mrna1;Target=ORF400 886 972 +
ChrX	stalkie_big_nohaplotig	CDS	34641715	34641747	.	+	0	Parent=ORF400.mrna1;Target=ORF400 973 1005 +
ChrX	stalkie_big_nohaplotig	CDS	34641837	34641869	.	+	0	Parent=ORF400.mrna1;Target=ORF400 1006 1038 +
ChrX	stalkie_big_nohaplotig	CDS	34641968	34642000	.	+	0	Parent=ORF400.mrna1;Target=ORF400 1039 1071 +
ChrX	stalkie_big_nohaplotig	CDS	34643259	34643351	.	+	0	Parent=ORF400.mrna1;Target=ORF400 1072 1164 +
ChrX	stalkie_big_nohaplotig	CDS	34643410	34643493	.	+	0	Parent=ORF400.mrna1;Target=ORF400 1165 1248 +
ChrX	stalkie_big_nohaplotig	CDS	34644434	34644505	.	+	0	Parent=ORF400.mrna1;Target=ORF400 1249 1320 +
ChrX	stalkie_big_nohaplotig	CDS	34645924	34646007	.	+	0	Parent=ORF400.mrna1;Target=ORF400 1321 1404 +
ChrX	stalkie_big_nohaplotig	CDS	34647227	34647334	.	+	0	Parent=ORF400.mrna1;Target=ORF400 1405 1512 +
ChrX	stalkie_big_nohaplotig	CDS	34649700	34649777	.	+	0	Parent=ORF400.mrna1;Target=ORF400 1513 1590 +
ChrX	stalkie_big_nohaplotig	CDS	34649884	34649976	.	+	0	Parent=ORF400.mrna1;Target=ORF400 1591 1683 +
ChrX	stalkie_big_nohaplotig	CDS	34650052	34650147	.	+	0	Parent=ORF400.mrna1;Target=ORF400 1684 1779 +
ChrX	stalkie_big_nohaplotig	CDS	34650509	34650622	.	+	0	Parent=ORF400.mrna1;Target=ORF400 1780 1893 +
ChrX	gffcl	locus	34655400	34656962	.	-	.	ID=RLOC_00002071;geneIDs=comp160625_c0_seq1.path1;transcripts=comp160625_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34655400	34656962	.	-	.	ID=comp160625_c0_seq1.mrna1;geneID=comp160625_c0_seq1.path1;Name=comp160625_c0_seq1;Dir=antisensecoverage=99.5;identity=96.9;matches=1290;mismatches=34;indels=7;unknowns=0;locus=RLOC_00002071
ChrX	stalkie_big_nohaplotig	exon	34655400	34656489	97	-	.	Parent=comp160625_c0_seq1.mrna1;Target=comp160625_c0_seq1 1 1089 -
ChrX	stalkie_big_nohaplotig	exon	34656722	34656962	95	-	.	Parent=comp160625_c0_seq1.mrna1;Target=comp160625_c0_seq1 1090 1324 -
ChrX	stalkie_big_nohaplotig	CDS	34656367	34656489	.	-	0	Parent=comp160625_c0_seq1.mrna1;Target=comp160625_c0_seq1 967 1089 .
ChrX	stalkie_big_nohaplotig	CDS	34656722	34656820	.	-	0	Parent=comp160625_c0_seq1.mrna1;Target=comp160625_c0_seq1 1090 1188 .
ChrX	gffcl	locus	34669452	34670130	.	+	.	ID=RLOC_00002072;geneIDs=comp152382_c1_seq1.path1;transcripts=comp152382_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34669452	34670130	.	+	.	ID=comp152382_c1_seq1.mrna1;geneID=comp152382_c1_seq1.path1;Name=comp152382_c1_seq1;Dir=sensecoverage=81.3;identity=99.8;matches=612;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002072
ChrX	stalkie_big_nohaplotig	exon	34669452	34669906	99	+	.	Parent=comp152382_c1_seq1.mrna1;Target=comp152382_c1_seq1 1 455 +
ChrX	stalkie_big_nohaplotig	exon	34669973	34670130	100	+	.	Parent=comp152382_c1_seq1.mrna1;Target=comp152382_c1_seq1 456 613 +
ChrX	stalkie_big_nohaplotig	CDS	34669453	34669906	.	+	0	Parent=comp152382_c1_seq1.mrna1;Target=comp152382_c1_seq1 2 455 +
ChrX	stalkie_big_nohaplotig	CDS	34669973	34670115	.	+	2	Parent=comp152382_c1_seq1.mrna1;Target=comp152382_c1_seq1 456 598 +
ChrX	gffcl	locus	34687438	34689390	.	-	.	ID=RLOC_00002073;geneIDs=FBgn0028487.3.path1;transcripts=FBgn0028487.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34687438	34689390	.	-	.	ID=FBgn0028487.3.mrna1;geneID=FBgn0028487.3.path1;Name=FBgn0028487.3;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1950;mismatches=3;indels=0;unknowns=0;Target=FBgn0028487.3 1953 1 .;locus=RLOC_00002073
ChrX	stalkie_big_nohaplotig	exon	34687438	34689390	99	-	.	Parent=FBgn0028487.3.mrna1
ChrX	stalkie_big_nohaplotig	CDS	34687438	34689390	.	-	0	Parent=FBgn0028487.3.mrna1
ChrX	gffcl	locus	34695129	34697119	.	+	.	ID=RLOC_00002074;geneIDs=ORF1513.path1;transcripts=ORF1513.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34695129	34697119	.	+	.	ID=ORF1513.mrna1;geneID=ORF1513.path1;Name=ORF1513;Dir=sensecoverage=100.0;identity=99.6;matches=1070;mismatches=4;indels=0;unknowns=0;locus=RLOC_00002074
ChrX	stalkie_big_nohaplotig	exon	34695129	34695591	99	+	.	Parent=ORF1513.mrna1;Target=ORF1513 1 463 +
ChrX	stalkie_big_nohaplotig	exon	34696509	34697119	100	+	.	Parent=ORF1513.mrna1;Target=ORF1513 464 1074 +
ChrX	stalkie_big_nohaplotig	CDS	34695129	34695591	.	+	0	Parent=ORF1513.mrna1;Target=ORF1513 1 463 +
ChrX	stalkie_big_nohaplotig	CDS	34696509	34697119	.	+	2	Parent=ORF1513.mrna1;Target=ORF1513 464 1074 +
ChrX	gffcl	locus	34699203	34745202	.	-	.	ID=RLOC_00002075;geneIDs=FBgn0033380.2.path1,comp158956_c0_seq1.path1;transcripts=FBgn0033380.2.mrna1,comp158956_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34699203	34745201	.	-	.	ID=FBgn0033380.2.mrna1;geneID=FBgn0033380.2.path1;Name=FBgn0033380.2;Dir=sensecoverage=100.0;identity=96.5;matches=900;mismatches=9;indels=24;unknowns=0;locus=RLOC_00002075
ChrX	stalkie_big_nohaplotig	exon	34699203	34699366	98	-	.	Parent=FBgn0033380.2.mrna1;Target=FBgn0033380.2 770 933 +
ChrX	stalkie_big_nohaplotig	exon	34699427	34699495	74	-	.	Parent=FBgn0033380.2.mrna1;Target=FBgn0033380.2 677 769 +
ChrX	stalkie_big_nohaplotig	exon	34743905	34744070	100	-	.	Parent=FBgn0033380.2.mrna1;Target=FBgn0033380.2 511 676 +
ChrX	stalkie_big_nohaplotig	exon	34744133	34744224	97	-	.	Parent=FBgn0033380.2.mrna1;Target=FBgn0033380.2 419 510 +
ChrX	stalkie_big_nohaplotig	exon	34744784	34745201	98	-	.	Parent=FBgn0033380.2.mrna1;Target=FBgn0033380.2 1 418 +
ChrX	stalkie_big_nohaplotig	CDS	34699203	34699366	.	-	2	Parent=FBgn0033380.2.mrna1;Target=FBgn0033380.2 770 933 +
ChrX	stalkie_big_nohaplotig	CDS	34699427	34699495	.	-	2	Parent=FBgn0033380.2.mrna1;Target=FBgn0033380.2 677 769 +
ChrX	stalkie_big_nohaplotig	CDS	34743905	34744070	.	-	0	Parent=FBgn0033380.2.mrna1;Target=FBgn0033380.2 511 676 +
ChrX	stalkie_big_nohaplotig	CDS	34744133	34744224	.	-	2	Parent=FBgn0033380.2.mrna1;Target=FBgn0033380.2 419 510 +
ChrX	stalkie_big_nohaplotig	CDS	34744784	34745201	.	-	0	Parent=FBgn0033380.2.mrna1;Target=FBgn0033380.2 1 418 +
ChrX	stalkie_big_nohaplotig	mRNA	34743534	34745202	.	-	.	ID=comp158956_c0_seq1.mrna1;geneID=comp158956_c0_seq1.path1;Name=comp158956_c0_seq1;Dir=antisensecoverage=99.6;identity=96.5;matches=977;mismatches=11;indels=24;unknowns=0;locus=RLOC_00002075
ChrX	stalkie_big_nohaplotig	exon	34743534	34743775	99	-	.	Parent=comp158956_c0_seq1.mrna1;Target=comp158956_c0_seq1 5 246 -
ChrX	stalkie_big_nohaplotig	exon	34743836	34744070	89	-	.	Parent=comp158956_c0_seq1.mrna1;Target=comp158956_c0_seq1 247 505 -
ChrX	stalkie_big_nohaplotig	exon	34744133	34744224	97	-	.	Parent=comp158956_c0_seq1.mrna1;Target=comp158956_c0_seq1 506 597 -
ChrX	stalkie_big_nohaplotig	exon	34744784	34745202	98	-	.	Parent=comp158956_c0_seq1.mrna1;Target=comp158956_c0_seq1 598 1016 -
ChrX	stalkie_big_nohaplotig	CDS	34743609	34743775	.	-	2	Parent=comp158956_c0_seq1.mrna1;Target=comp158956_c0_seq1 80 246 .
ChrX	stalkie_big_nohaplotig	CDS	34743836	34744070	.	-	0	Parent=comp158956_c0_seq1.mrna1;Target=comp158956_c0_seq1 247 505 .
ChrX	stalkie_big_nohaplotig	CDS	34744133	34744224	.	-	2	Parent=comp158956_c0_seq1.mrna1;Target=comp158956_c0_seq1 506 597 .
ChrX	stalkie_big_nohaplotig	CDS	34744784	34745201	.	-	0	Parent=comp158956_c0_seq1.mrna1;Target=comp158956_c0_seq1 598 1015 .
ChrX	gffcl	locus	34703933	34704202	.	-	.	ID=RLOC_00002076;geneIDs=comp145400_c1_seq1.path1;transcripts=comp145400_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34703933	34704202	.	-	.	ID=comp145400_c1_seq1.mrna1;geneID=comp145400_c1_seq1.path1;Name=comp145400_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=270;mismatches=0;indels=0;unknowns=0;Target=comp145400_c1_seq1 270 1 .;locus=RLOC_00002076
ChrX	stalkie_big_nohaplotig	exon	34703933	34704202	100	-	.	Parent=comp145400_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	34703933	34704202	.	-	0	Parent=comp145400_c1_seq1.mrna1
ChrX	gffcl	locus	34706409	34707054	.	-	.	ID=RLOC_00002077;geneIDs=Dv_FBgn0205088.path1,comp146028_c4_seq1.path1;transcripts=comp146028_c4_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34706717	34707054	.	-	.	ID=comp146028_c4_seq1.mrna1;geneID=comp146028_c4_seq1.path1;Name=comp146028_c4_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=336;mismatches=2;indels=0;unknowns=0;Target=comp146028_c4_seq1 338 1 .;CDS_Target=comp146028_c4_seq1 337 2 .;locus=RLOC_00002077
ChrX	stalkie_big_nohaplotig	exon	34706717	34707054	99	-	.	Parent=comp146028_c4_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	34706718	34707053	.	-	0	Parent=comp146028_c4_seq1.mrna1
ChrX	gffcl	locus	34723474	34724947	.	+	.	ID=RLOC_00002078;geneIDs=FBgn0260944.1.path1;transcripts=FBgn0260944.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34723474	34724947	.	+	.	ID=FBgn0260944.1.mrna1;geneID=FBgn0260944.1.path1;Name=FBgn0260944.1;Dir=sensecoverage=100.0;identity=100.0;matches=1023;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002078
ChrX	stalkie_big_nohaplotig	exon	34723474	34723700	100	+	.	Parent=FBgn0260944.1.mrna1;Target=FBgn0260944.1 1 227 +
ChrX	stalkie_big_nohaplotig	exon	34723797	34724417	100	+	.	Parent=FBgn0260944.1.mrna1;Target=FBgn0260944.1 228 848 +
ChrX	stalkie_big_nohaplotig	exon	34724523	34724612	100	+	.	Parent=FBgn0260944.1.mrna1;Target=FBgn0260944.1 849 938 +
ChrX	stalkie_big_nohaplotig	exon	34724863	34724947	100	+	.	Parent=FBgn0260944.1.mrna1;Target=FBgn0260944.1 939 1023 +
ChrX	stalkie_big_nohaplotig	CDS	34723474	34723700	.	+	0	Parent=FBgn0260944.1.mrna1;Target=FBgn0260944.1 1 227 +
ChrX	stalkie_big_nohaplotig	CDS	34723797	34724417	.	+	1	Parent=FBgn0260944.1.mrna1;Target=FBgn0260944.1 228 848 +
ChrX	stalkie_big_nohaplotig	CDS	34724523	34724612	.	+	1	Parent=FBgn0260944.1.mrna1;Target=FBgn0260944.1 849 938 +
ChrX	stalkie_big_nohaplotig	CDS	34724863	34724947	.	+	1	Parent=FBgn0260944.1.mrna1;Target=FBgn0260944.1 939 1023 +
ChrX	gffcl	locus	34731384	34732303	.	+	.	ID=RLOC_00002079;geneIDs=ORF2428.path1;transcripts=ORF2428.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34731384	34732303	.	+	.	ID=ORF2428.mrna1;geneID=ORF2428.path1;Name=ORF2428;Dir=sensecoverage=100.0;identity=100.0;matches=861;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002079
ChrX	stalkie_big_nohaplotig	exon	34731384	34731866	100	+	.	Parent=ORF2428.mrna1;Target=ORF2428 1 483 +
ChrX	stalkie_big_nohaplotig	exon	34731926	34732303	100	+	.	Parent=ORF2428.mrna1;Target=ORF2428 484 861 +
ChrX	stalkie_big_nohaplotig	CDS	34731384	34731866	.	+	0	Parent=ORF2428.mrna1;Target=ORF2428 1 483 +
ChrX	stalkie_big_nohaplotig	CDS	34731926	34732303	.	+	0	Parent=ORF2428.mrna1;Target=ORF2428 484 861 +
ChrX	gffcl	locus	34741105	34742503	.	+	.	ID=RLOC_00002080;geneIDs=comp157802_c0_seq1.path1;transcripts=comp157802_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34741105	34742503	.	+	.	ID=comp157802_c0_seq1.mrna1;geneID=comp157802_c0_seq1.path1;Name=comp157802_c0_seq1;Dir=antisensecoverage=99.5;identity=98.9;matches=721;mismatches=3;indels=5;unknowns=0;locus=RLOC_00002080
ChrX	stalkie_big_nohaplotig	exon	34741105	34741202	100	+	.	Parent=comp157802_c0_seq1.mrna1;Target=comp157802_c0_seq1 634 731 -
ChrX	stalkie_big_nohaplotig	exon	34741361	34741423	100	+	.	Parent=comp157802_c0_seq1.mrna1;Target=comp157802_c0_seq1 571 633 -
ChrX	stalkie_big_nohaplotig	exon	34741531	34741658	100	+	.	Parent=comp157802_c0_seq1.mrna1;Target=comp157802_c0_seq1 443 570 -
ChrX	stalkie_big_nohaplotig	exon	34741755	34741817	100	+	.	Parent=comp157802_c0_seq1.mrna1;Target=comp157802_c0_seq1 380 442 -
ChrX	stalkie_big_nohaplotig	exon	34742132	34742503	97	+	.	Parent=comp157802_c0_seq1.mrna1;Target=comp157802_c0_seq1 3 379 -
ChrX	stalkie_big_nohaplotig	CDS	34741364	34741423	.	+	0	Parent=comp157802_c0_seq1.mrna1;Target=comp157802_c0_seq1 571 630 .
ChrX	stalkie_big_nohaplotig	CDS	34741531	34741658	.	+	0	Parent=comp157802_c0_seq1.mrna1;Target=comp157802_c0_seq1 443 570 .
ChrX	stalkie_big_nohaplotig	CDS	34741755	34741817	.	+	1	Parent=comp157802_c0_seq1.mrna1;Target=comp157802_c0_seq1 380 442 .
ChrX	stalkie_big_nohaplotig	CDS	34742132	34742441	.	+	1	Parent=comp157802_c0_seq1.mrna1;Target=comp157802_c0_seq1 70 379 .
ChrX	gffcl	locus	34748959	34749440	.	-	.	ID=RLOC_00002081;geneIDs=comp152975_c0_seq1.path2;transcripts=comp152975_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	34748959	34749440	.	-	.	ID=comp152975_c0_seq1.mrna2;geneID=comp152975_c0_seq1.path2;Name=comp152975_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=479;mismatches=3;indels=0;unknowns=0;Target=comp152975_c0_seq1 482 1 .;CDS_Target=comp152975_c0_seq1 185 63 .;locus=RLOC_00002081
ChrX	stalkie_big_nohaplotig	exon	34748959	34749440	99	-	.	Parent=comp152975_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	34749256	34749378	.	-	0	Parent=comp152975_c0_seq1.mrna2
ChrX	gffcl	locus	34786781	34787838	.	-	.	ID=RLOC_00002082;geneIDs=ORF3059.path1;transcripts=ORF3059.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34786781	34787838	.	-	.	ID=ORF3059.mrna1;geneID=ORF3059.path1;Name=ORF3059;Dir=sensecoverage=100.0;identity=99.9;matches=773;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002082
ChrX	stalkie_big_nohaplotig	exon	34786781	34787437	100	-	.	Parent=ORF3059.mrna1;Target=ORF3059 118 774 +
ChrX	stalkie_big_nohaplotig	exon	34787722	34787838	99	-	.	Parent=ORF3059.mrna1;Target=ORF3059 1 117 +
ChrX	stalkie_big_nohaplotig	CDS	34786781	34787437	.	-	0	Parent=ORF3059.mrna1;Target=ORF3059 118 774 +
ChrX	stalkie_big_nohaplotig	CDS	34787722	34787838	.	-	0	Parent=ORF3059.mrna1;Target=ORF3059 1 117 +
ChrX	gffcl	locus	34790755	34794067	.	+	.	ID=RLOC_00002083;geneIDs=FBgn0039743.1.path1;transcripts=FBgn0039743.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34790755	34794067	.	+	.	ID=FBgn0039743.1.mrna1;geneID=FBgn0039743.1.path1;Name=FBgn0039743.1;Dir=sensecoverage=100.0;identity=99.1;matches=1085;mismatches=10;indels=0;unknowns=0;locus=RLOC_00002083
ChrX	stalkie_big_nohaplotig	exon	34790755	34790875	96	+	.	Parent=FBgn0039743.1.mrna1;Target=FBgn0039743.1 1 121 +
ChrX	stalkie_big_nohaplotig	exon	34791098	34791852	99	+	.	Parent=FBgn0039743.1.mrna1;Target=FBgn0039743.1 122 876 +
ChrX	stalkie_big_nohaplotig	exon	34793849	34794067	98	+	.	Parent=FBgn0039743.1.mrna1;Target=FBgn0039743.1 877 1095 +
ChrX	stalkie_big_nohaplotig	CDS	34790755	34790875	.	+	0	Parent=FBgn0039743.1.mrna1;Target=FBgn0039743.1 1 121 +
ChrX	stalkie_big_nohaplotig	CDS	34791098	34791852	.	+	2	Parent=FBgn0039743.1.mrna1;Target=FBgn0039743.1 122 876 +
ChrX	stalkie_big_nohaplotig	CDS	34793849	34794067	.	+	0	Parent=FBgn0039743.1.mrna1;Target=FBgn0039743.1 877 1095 +
ChrX	gffcl	locus	34932104	34932342	.	+	.	ID=RLOC_00002086;geneIDs=comp53301_c0_seq1.path1;transcripts=comp53301_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34932104	34932342	.	+	.	ID=comp53301_c0_seq1.mrna1;geneID=comp53301_c0_seq1.path1;Name=comp53301_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=239;mismatches=0;indels=0;unknowns=0;Target=comp53301_c0_seq1 239 1 .;CDS_Target=comp53301_c0_seq1 84 43 .;locus=RLOC_00002086
ChrX	stalkie_big_nohaplotig	exon	34932104	34932342	100	+	.	Parent=comp53301_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	34932146	34932187	.	+	0	Parent=comp53301_c0_seq1.mrna1
ChrX	gffcl	locus	34932591	34932978	.	+	.	ID=RLOC_00002087;geneIDs=comp93380_c0_seq1.path1;transcripts=comp93380_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34932591	34932978	.	+	.	ID=comp93380_c0_seq1.mrna1;geneID=comp93380_c0_seq1.path1;Name=comp93380_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=388;mismatches=0;indels=0;unknowns=0;Target=comp93380_c0_seq1 388 1 .;CDS_Target=comp93380_c0_seq1 62 3 .;locus=RLOC_00002087
ChrX	stalkie_big_nohaplotig	exon	34932591	34932978	100	+	.	Parent=comp93380_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	34932593	34932652	.	+	0	Parent=comp93380_c0_seq1.mrna1
ChrX	gffcl	locus	34933025	34933287	.	+	.	ID=RLOC_00002088;geneIDs=comp116019_c0_seq1.path1;transcripts=comp116019_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34933025	34933287	.	+	.	ID=comp116019_c0_seq1.mrna1;geneID=comp116019_c0_seq1.path1;Name=comp116019_c0_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=263;mismatches=0;indels=0;unknowns=0;Target=comp116019_c0_seq1 264 2 .;CDS_Target=comp116019_c0_seq1 64 2 .;locus=RLOC_00002088
ChrX	stalkie_big_nohaplotig	exon	34933025	34933287	100	+	.	Parent=comp116019_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	34933025	34933087	.	+	0	Parent=comp116019_c0_seq1.mrna1
ChrX	gffcl	locus	34936738	34946434	.	-	.	ID=RLOC_00002089;geneIDs=FBgn0031955.1.path1;transcripts=FBgn0031955.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	34936738	34946434	.	-	.	ID=FBgn0031955.1.mrna1;geneID=FBgn0031955.1.path1;Name=FBgn0031955.1;Dir=sensecoverage=92.3;identity=100.0;matches=2722;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002089
ChrX	stalkie_big_nohaplotig	exon	34936738	34937984	100	-	.	Parent=FBgn0031955.1.mrna1;Target=FBgn0031955.1 1676 2922 +
ChrX	stalkie_big_nohaplotig	exon	34938238	34938495	100	-	.	Parent=FBgn0031955.1.mrna1;Target=FBgn0031955.1 1418 1675 +
ChrX	stalkie_big_nohaplotig	exon	34938605	34938725	100	-	.	Parent=FBgn0031955.1.mrna1;Target=FBgn0031955.1 1297 1417 +
ChrX	stalkie_big_nohaplotig	exon	34939010	34939230	100	-	.	Parent=FBgn0031955.1.mrna1;Target=FBgn0031955.1 1076 1296 +
ChrX	stalkie_big_nohaplotig	exon	34939407	34939601	100	-	.	Parent=FBgn0031955.1.mrna1;Target=FBgn0031955.1 881 1075 +
ChrX	stalkie_big_nohaplotig	exon	34942030	34942233	100	-	.	Parent=FBgn0031955.1.mrna1;Target=FBgn0031955.1 677 880 +
ChrX	stalkie_big_nohaplotig	exon	34942441	34942534	100	-	.	Parent=FBgn0031955.1.mrna1;Target=FBgn0031955.1 583 676 +
ChrX	stalkie_big_nohaplotig	exon	34942721	34942930	100	-	.	Parent=FBgn0031955.1.mrna1;Target=FBgn0031955.1 373 582 +
ChrX	stalkie_big_nohaplotig	exon	34946263	34946434	100	-	.	Parent=FBgn0031955.1.mrna1;Target=FBgn0031955.1 201 372 +
ChrX	stalkie_big_nohaplotig	CDS	34936738	34937984	.	-	2	Parent=FBgn0031955.1.mrna1;Target=FBgn0031955.1 1676 2922 +
ChrX	stalkie_big_nohaplotig	CDS	34938238	34938495	.	-	2	Parent=FBgn0031955.1.mrna1;Target=FBgn0031955.1 1418 1675 +
ChrX	stalkie_big_nohaplotig	CDS	34938605	34938725	.	-	0	Parent=FBgn0031955.1.mrna1;Target=FBgn0031955.1 1297 1417 +
ChrX	stalkie_big_nohaplotig	CDS	34939010	34939230	.	-	2	Parent=FBgn0031955.1.mrna1;Target=FBgn0031955.1 1076 1296 +
ChrX	stalkie_big_nohaplotig	CDS	34939407	34939601	.	-	2	Parent=FBgn0031955.1.mrna1;Target=FBgn0031955.1 881 1075 +
ChrX	stalkie_big_nohaplotig	CDS	34942030	34942233	.	-	2	Parent=FBgn0031955.1.mrna1;Target=FBgn0031955.1 677 880 +
ChrX	stalkie_big_nohaplotig	CDS	34942441	34942534	.	-	0	Parent=FBgn0031955.1.mrna1;Target=FBgn0031955.1 583 676 +
ChrX	stalkie_big_nohaplotig	CDS	34942721	34942930	.	-	0	Parent=FBgn0031955.1.mrna1;Target=FBgn0031955.1 373 582 +
ChrX	stalkie_big_nohaplotig	CDS	34946263	34946433	.	-	0	Parent=FBgn0031955.1.mrna1;Target=FBgn0031955.1 202 372 +
ChrX	gffcl	locus	35017143	35040817	.	+	.	ID=RLOC_00002090;geneIDs=comp139237_c1_seq1.path1;transcripts=comp139237_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35017143	35040817	.	+	.	ID=comp139237_c1_seq1.mrna1;geneID=comp139237_c1_seq1.path1;Name=comp139237_c1_seq1;Dir=indeterminatecoverage=18.7;identity=100.0;matches=326;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002090
ChrX	stalkie_big_nohaplotig	exon	35017143	35017146	100	+	.	Parent=comp139237_c1_seq1.mrna1;Target=comp139237_c1_seq1 1422 1419 .
ChrX	stalkie_big_nohaplotig	exon	35020397	35020405	100	+	.	Parent=comp139237_c1_seq1.mrna1;Target=comp139237_c1_seq1 1431 1423 .
ChrX	stalkie_big_nohaplotig	exon	35027487	35027490	100	+	.	Parent=comp139237_c1_seq1.mrna1;Target=comp139237_c1_seq1 1436 1433 .
ChrX	stalkie_big_nohaplotig	exon	35040509	35040817	100	+	.	Parent=comp139237_c1_seq1.mrna1;Target=comp139237_c1_seq1 1745 1437 .
ChrX	stalkie_big_nohaplotig	CDS	35017144	35017146	.	+	0	Parent=comp139237_c1_seq1.mrna1;Target=comp139237_c1_seq1 1422 1420 .
ChrX	stalkie_big_nohaplotig	CDS	35020397	35020405	.	+	0	Parent=comp139237_c1_seq1.mrna1;Target=comp139237_c1_seq1 1431 1423 .
ChrX	stalkie_big_nohaplotig	CDS	35027487	35027490	.	+	0	Parent=comp139237_c1_seq1.mrna1;Target=comp139237_c1_seq1 1436 1433 .
ChrX	stalkie_big_nohaplotig	CDS	35040509	35040563	.	+	2	Parent=comp139237_c1_seq1.mrna1;Target=comp139237_c1_seq1 1491 1437 .
ChrX	gffcl	locus	35039781	35040355	.	-	.	ID=RLOC_00002091;geneIDs=comp112806_c0_seq1.path1;transcripts=comp112806_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35039781	35040355	.	-	.	ID=comp112806_c0_seq1.mrna1;geneID=comp112806_c0_seq1.path1;Name=comp112806_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.5;matches=572;mismatches=3;indels=0;unknowns=0;Target=comp112806_c0_seq1 577 3 .;CDS_Target=comp112806_c0_seq1 576 4 .;locus=RLOC_00002091
ChrX	stalkie_big_nohaplotig	exon	35039781	35040355	99	-	.	Parent=comp112806_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35039782	35040354	.	-	0	Parent=comp112806_c0_seq1.mrna1
ChrX	gffcl	locus	35041202	35052216	.	-	.	ID=RLOC_00002092;geneIDs=comp118732_c0_seq1.path1;transcripts=comp118732_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35041202	35052216	.	-	.	ID=comp118732_c0_seq1.mrna1;geneID=comp118732_c0_seq1.path1;Name=comp118732_c0_seq1;Dir=antisensecoverage=99.7;identity=100.0;matches=378;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002092
ChrX	stalkie_big_nohaplotig	exon	35041202	35041437	100	-	.	Parent=comp118732_c0_seq1.mrna1;Target=comp118732_c0_seq1 2 237 -
ChrX	stalkie_big_nohaplotig	exon	35049295	35049343	100	-	.	Parent=comp118732_c0_seq1.mrna1;Target=comp118732_c0_seq1 238 286 -
ChrX	stalkie_big_nohaplotig	exon	35052124	35052216	100	-	.	Parent=comp118732_c0_seq1.mrna1;Target=comp118732_c0_seq1 287 379 -
ChrX	stalkie_big_nohaplotig	CDS	35041203	35041437	.	-	1	Parent=comp118732_c0_seq1.mrna1;Target=comp118732_c0_seq1 3 237 .
ChrX	stalkie_big_nohaplotig	CDS	35049295	35049343	.	-	2	Parent=comp118732_c0_seq1.mrna1;Target=comp118732_c0_seq1 238 286 .
ChrX	stalkie_big_nohaplotig	CDS	35052124	35052214	.	-	0	Parent=comp118732_c0_seq1.mrna1;Target=comp118732_c0_seq1 287 377 .
ChrX	gffcl	locus	35042802	35045993	.	+	.	ID=RLOC_00002093;geneIDs=ORF80.path1;transcripts=ORF80.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35042802	35045993	.	+	.	ID=ORF80.mrna1;geneID=ORF80.path1;Name=ORF80;Dir=indeterminatecoverage=100.0;identity=99.8;matches=3185;mismatches=7;indels=0;unknowns=0;Target=ORF80 3192 1 .;locus=RLOC_00002093
ChrX	stalkie_big_nohaplotig	exon	35042802	35045993	99	+	.	Parent=ORF80.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35042802	35045993	.	+	0	Parent=ORF80.mrna1
ChrX	gffcl	locus	35159628	35160633	.	-	.	ID=RLOC_00002094;geneIDs=comp156550_c0_seq1.path1;transcripts=comp156550_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35159628	35160633	.	-	.	ID=comp156550_c0_seq1.mrna1;geneID=comp156550_c0_seq1.path1;Name=comp156550_c0_seq1;Dir=antisensecoverage=99.2;identity=96.7;matches=724;mismatches=25;indels=0;unknowns=0;Target=comp156550_c0_seq1 339 677 .;locus=RLOC_00002094
ChrX	stalkie_big_nohaplotig	exon	35159628	35159788	99	-	.	Parent=comp156550_c0_seq1.mrna1;Target=comp156550_c0_seq1 2 162 -
ChrX	stalkie_big_nohaplotig	exon	35159888	35159931	100	-	.	Parent=comp156550_c0_seq1.mrna1;Target=comp156550_c0_seq1 163 206 -
ChrX	stalkie_big_nohaplotig	exon	35160028	35160157	100	-	.	Parent=comp156550_c0_seq1.mrna1;Target=comp156550_c0_seq1 207 336 -
ChrX	stalkie_big_nohaplotig	exon	35160220	35160633	94	-	.	Parent=comp156550_c0_seq1.mrna1;Target=comp156550_c0_seq1 337 750 -
ChrX	stalkie_big_nohaplotig	CDS	35160222	35160560	.	-	0	Parent=comp156550_c0_seq1.mrna1
ChrX	gffcl	locus	35168335	35169163	.	-	.	ID=RLOC_00002095;geneIDs=ORF3056.path1;transcripts=ORF3056.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35168335	35169163	.	-	.	ID=ORF3056.mrna1;geneID=ORF3056.path1;Name=ORF3056;Dir=sensecoverage=100.0;identity=98.8;matches=765;mismatches=9;indels=0;unknowns=0;locus=RLOC_00002095
ChrX	stalkie_big_nohaplotig	exon	35168335	35168474	100	-	.	Parent=ORF3056.mrna1;Target=ORF3056 635 774 +
ChrX	stalkie_big_nohaplotig	exon	35168530	35169163	98	-	.	Parent=ORF3056.mrna1;Target=ORF3056 1 634 +
ChrX	stalkie_big_nohaplotig	CDS	35168335	35168474	.	-	2	Parent=ORF3056.mrna1;Target=ORF3056 635 774 +
ChrX	stalkie_big_nohaplotig	CDS	35168530	35169163	.	-	0	Parent=ORF3056.mrna1;Target=ORF3056 1 634 +
ChrX	gffcl	locus	35170666	35171628	.	+	.	ID=RLOC_00002096;geneIDs=comp292887_c0_seq1.path1;transcripts=comp292887_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35170666	35171628	.	+	.	ID=comp292887_c0_seq1.mrna1;geneID=comp292887_c0_seq1.path1;Name=comp292887_c0_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=963;mismatches=0;indels=0;unknowns=0;Target=comp292887_c0_seq1 963 1 .;CDS_Target=comp292887_c0_seq1 291 103 .;locus=RLOC_00002096
ChrX	stalkie_big_nohaplotig	exon	35170666	35171628	100	+	.	Parent=comp292887_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35170768	35170956	.	+	0	Parent=comp292887_c0_seq1.mrna1
ChrX	gffcl	locus	35177745	35179400	.	-	.	ID=RLOC_00002097;geneIDs=FBgn0039177.1.path1;transcripts=FBgn0039177.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35177745	35179400	.	-	.	ID=FBgn0039177.1.mrna1;geneID=FBgn0039177.1.path1;Name=FBgn0039177.1;Dir=sensecoverage=100.0;identity=99.9;matches=1520;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002097
ChrX	stalkie_big_nohaplotig	exon	35177745	35178603	100	-	.	Parent=FBgn0039177.1.mrna1;Target=FBgn0039177.1 663 1521 +
ChrX	stalkie_big_nohaplotig	exon	35178668	35178850	99	-	.	Parent=FBgn0039177.1.mrna1;Target=FBgn0039177.1 480 662 +
ChrX	stalkie_big_nohaplotig	exon	35178922	35179400	100	-	.	Parent=FBgn0039177.1.mrna1;Target=FBgn0039177.1 1 479 +
ChrX	stalkie_big_nohaplotig	CDS	35177745	35178603	.	-	1	Parent=FBgn0039177.1.mrna1;Target=FBgn0039177.1 663 1521 +
ChrX	stalkie_big_nohaplotig	CDS	35178668	35178850	.	-	1	Parent=FBgn0039177.1.mrna1;Target=FBgn0039177.1 480 662 +
ChrX	stalkie_big_nohaplotig	CDS	35178922	35179400	.	-	0	Parent=FBgn0039177.1.mrna1;Target=FBgn0039177.1 1 479 +
ChrX	gffcl	locus	35234578	35235577	.	+	.	ID=RLOC_00002098;geneIDs=comp155004_c0_seq1.path1;transcripts=comp155004_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35234578	35235577	.	+	.	ID=comp155004_c0_seq1.mrna1;geneID=comp155004_c0_seq1.path1;Name=comp155004_c0_seq1;Dir=sensecoverage=99.9;identity=99.6;matches=940;mismatches=4;indels=0;unknowns=0;locus=RLOC_00002098
ChrX	stalkie_big_nohaplotig	exon	35234578	35235246	100	+	.	Parent=comp155004_c0_seq1.mrna1;Target=comp155004_c0_seq1 1 669 +
ChrX	stalkie_big_nohaplotig	exon	35235303	35235577	98	+	.	Parent=comp155004_c0_seq1.mrna1;Target=comp155004_c0_seq1 670 944 +
ChrX	stalkie_big_nohaplotig	CDS	35234670	35235246	.	+	0	Parent=comp155004_c0_seq1.mrna1;Target=comp155004_c0_seq1 93 669 +
ChrX	stalkie_big_nohaplotig	CDS	35235303	35235433	.	+	2	Parent=comp155004_c0_seq1.mrna1;Target=comp155004_c0_seq1 670 800 +
ChrX	gffcl	locus	35258233	35259068	.	+	.	ID=RLOC_00002099;geneIDs=ORF3034.path1;transcripts=ORF3034.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35258233	35259068	.	+	.	ID=ORF3034.mrna1;geneID=ORF3034.path1;Name=ORF3034;Dir=sensecoverage=100.0;identity=99.5;matches=773;mismatches=4;indels=0;unknowns=0;locus=RLOC_00002099
ChrX	stalkie_big_nohaplotig	exon	35258233	35258869	99	+	.	Parent=ORF3034.mrna1;Target=ORF3034 1 637 +
ChrX	stalkie_big_nohaplotig	exon	35258929	35259068	100	+	.	Parent=ORF3034.mrna1;Target=ORF3034 638 777 +
ChrX	stalkie_big_nohaplotig	CDS	35258233	35258869	.	+	0	Parent=ORF3034.mrna1;Target=ORF3034 1 637 +
ChrX	stalkie_big_nohaplotig	CDS	35258929	35259068	.	+	2	Parent=ORF3034.mrna1;Target=ORF3034 638 777 +
ChrX	gffcl	locus	35260370	35260875	.	-	.	ID=RLOC_00002100;geneIDs=comp141597_c0_seq1.path1;transcripts=comp141597_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35260370	35260875	.	-	.	ID=comp141597_c0_seq1.mrna1;geneID=comp141597_c0_seq1.path1;Name=comp141597_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=506;mismatches=0;indels=0;unknowns=0;Target=comp141597_c0_seq1 506 1 .;CDS_Target=comp141597_c0_seq1 304 194 .;locus=RLOC_00002100
ChrX	stalkie_big_nohaplotig	exon	35260370	35260875	100	-	.	Parent=comp141597_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35260572	35260682	.	-	0	Parent=comp141597_c0_seq1.mrna1
ChrX	gffcl	locus	35260880	35261251	.	+	.	ID=RLOC_00002101;geneIDs=comp144359_c0_seq1.path2;transcripts=comp144359_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	35260880	35261251	.	+	.	ID=comp144359_c0_seq1.mrna2;geneID=comp144359_c0_seq1.path2;Name=comp144359_c0_seq1;Dir=indeterminatecoverage=84.9;identity=99.2;matches=369;mismatches=3;indels=0;unknowns=0;Target=comp144359_c0_seq1 438 67 .;CDS_Target=comp144359_c0_seq1 375 268 .;locus=RLOC_00002101
ChrX	stalkie_big_nohaplotig	exon	35260880	35261251	99	+	.	Parent=comp144359_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	35261081	35261188	.	+	0	Parent=comp144359_c0_seq1.mrna2
ChrX	gffcl	locus	35261263	35292134	.	-	.	ID=RLOC_00002102;geneIDs=comp152967_c0_seq1.path1;transcripts=comp152967_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35261263	35292134	.	-	.	ID=comp152967_c0_seq1.mrna1;geneID=comp152967_c0_seq1.path1;Name=comp152967_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=1276;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002102
ChrX	stalkie_big_nohaplotig	exon	35261263	35261843	100	-	.	Parent=comp152967_c0_seq1.mrna1;Target=comp152967_c0_seq1 697 1277 +
ChrX	stalkie_big_nohaplotig	exon	35280890	35281294	100	-	.	Parent=comp152967_c0_seq1.mrna1;Target=comp152967_c0_seq1 292 696 +
ChrX	stalkie_big_nohaplotig	exon	35291844	35292134	99	-	.	Parent=comp152967_c0_seq1.mrna1;Target=comp152967_c0_seq1 1 291 +
ChrX	stalkie_big_nohaplotig	CDS	35261676	35261843	.	-	0	Parent=comp152967_c0_seq1.mrna1;Target=comp152967_c0_seq1 697 864 +
ChrX	stalkie_big_nohaplotig	CDS	35280890	35281042	.	-	0	Parent=comp152967_c0_seq1.mrna1;Target=comp152967_c0_seq1 544 696 +
ChrX	gffcl	locus	35317850	35318465	.	+	.	ID=RLOC_00002103;geneIDs=comp156798_c0_seq1.path1;transcripts=comp156798_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35317850	35318465	.	+	.	ID=comp156798_c0_seq1.mrna1;geneID=comp156798_c0_seq1.path1;Name=comp156798_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.2;matches=611;mismatches=5;indels=0;unknowns=0;Target=comp156798_c0_seq1 626 11 .;CDS_Target=comp156798_c0_seq1 504 85 .;locus=RLOC_00002103
ChrX	stalkie_big_nohaplotig	exon	35317850	35318465	99	+	.	Parent=comp156798_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35317924	35318343	.	+	0	Parent=comp156798_c0_seq1.mrna1
ChrX	gffcl	locus	35326850	35327498	.	+	.	ID=RLOC_00002104;geneIDs=comp154886_c0_seq1.path1;transcripts=comp154886_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35326850	35327498	.	+	.	ID=comp154886_c0_seq1.mrna1;geneID=comp154886_c0_seq1.path1;Name=comp154886_c0_seq1;Dir=indeterminatecoverage=86.6;identity=98.5;matches=639;mismatches=10;indels=0;unknowns=0;Target=comp154886_c0_seq1 649 1 .;CDS_Target=comp154886_c0_seq1 628 68 .;locus=RLOC_00002104
ChrX	stalkie_big_nohaplotig	exon	35326850	35327498	98	+	.	Parent=comp154886_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35326917	35327477	.	+	0	Parent=comp154886_c0_seq1.mrna1
ChrX	gffcl	locus	35335258	35338189	.	-	.	ID=RLOC_00002105;geneIDs=ORF122.path1;transcripts=ORF122.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35335258	35338189	.	-	.	ID=ORF122.mrna1;geneID=ORF122.path1;Name=ORF122;Dir=indeterminatecoverage=99.3;identity=99.4;matches=2914;mismatches=18;indels=0;unknowns=0;Target=ORF122 2952 21 .;CDS_Target=ORF122 2952 22 .;locus=RLOC_00002105
ChrX	stalkie_big_nohaplotig	exon	35335258	35338189	99	-	.	Parent=ORF122.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35335258	35338188	.	-	0	Parent=ORF122.mrna1
ChrX	gffcl	locus	35349571	35350041	.	-	.	ID=RLOC_00002107;geneIDs=comp134854_c0_seq1.path1;transcripts=comp134854_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35349571	35350041	.	-	.	ID=comp134854_c0_seq1.mrna1;geneID=comp134854_c0_seq1.path1;Name=comp134854_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=471;mismatches=0;indels=0;unknowns=0;Target=comp134854_c0_seq1 471 1 .;CDS_Target=comp134854_c0_seq1 55 2 .;locus=RLOC_00002107
ChrX	stalkie_big_nohaplotig	exon	35349571	35350041	100	-	.	Parent=comp134854_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35349987	35350040	.	-	0	Parent=comp134854_c0_seq1.mrna1
ChrX	gffcl	locus	35350656	35418196	.	-	.	ID=RLOC_00002108;geneIDs=FBgn0031959.1.path1;transcripts=FBgn0031959.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35350656	35418196	.	-	.	ID=FBgn0031959.1.mrna1;geneID=FBgn0031959.1.path1;Name=FBgn0031959.1;Dir=sensecoverage=99.9;identity=99.6;matches=1102;mismatches=3;indels=1;unknowns=0;locus=RLOC_00002108
ChrX	stalkie_big_nohaplotig	exon	35350656	35350809	100	-	.	Parent=FBgn0031959.1.mrna1;Target=FBgn0031959.1 954 1107 +
ChrX	stalkie_big_nohaplotig	exon	35353281	35353406	100	-	.	Parent=FBgn0031959.1.mrna1;Target=FBgn0031959.1 828 953 +
ChrX	stalkie_big_nohaplotig	exon	35353469	35353813	100	-	.	Parent=FBgn0031959.1.mrna1;Target=FBgn0031959.1 483 827 +
ChrX	stalkie_big_nohaplotig	exon	35358249	35358373	100	-	.	Parent=FBgn0031959.1.mrna1;Target=FBgn0031959.1 358 482 +
ChrX	stalkie_big_nohaplotig	exon	35376017	35376150	99	-	.	Parent=FBgn0031959.1.mrna1;Target=FBgn0031959.1 223 357 +
ChrX	stalkie_big_nohaplotig	exon	35417976	35418196	98	-	.	Parent=FBgn0031959.1.mrna1;Target=FBgn0031959.1 2 222 +
ChrX	stalkie_big_nohaplotig	CDS	35358324	35358373	.	-	0	Parent=FBgn0031959.1.mrna1;Target=FBgn0031959.1 358 407 +
ChrX	stalkie_big_nohaplotig	CDS	35376017	35376150	.	-	2	Parent=FBgn0031959.1.mrna1;Target=FBgn0031959.1 223 357 +
ChrX	stalkie_big_nohaplotig	CDS	35417976	35418195	.	-	0	Parent=FBgn0031959.1.mrna1;Target=FBgn0031959.1 3 222 +
ChrX	gffcl	locus	35360663	35361319	.	+	.	ID=RLOC_00002109;geneIDs=comp146328_c0_seq1.path1;transcripts=comp146328_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35360663	35361319	.	+	.	ID=comp146328_c0_seq1.mrna1;geneID=comp146328_c0_seq1.path1;Name=comp146328_c0_seq1;Dir=indeterminatecoverage=97.8;identity=98.9;matches=650;mismatches=7;indels=0;unknowns=0;Target=comp146328_c0_seq1 657 1 .;CDS_Target=comp146328_c0_seq1 552 109 .;locus=RLOC_00002109
ChrX	stalkie_big_nohaplotig	exon	35360663	35361319	98	+	.	Parent=comp146328_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35360771	35361214	.	+	0	Parent=comp146328_c0_seq1.mrna1
ChrX	gffcl	locus	35418646	35419189	.	-	.	ID=RLOC_00002110;geneIDs=comp140222_c0_seq1.path1;transcripts=comp140222_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35418646	35419189	.	-	.	ID=comp140222_c0_seq1.mrna1;geneID=comp140222_c0_seq1.path1;Name=comp140222_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.8;matches=543;mismatches=0;indels=1;unknowns=0;Target=comp140222_c0_seq1 545 3 .;CDS_Target=comp140222_c0_seq1 545 156 .;locus=RLOC_00002110
ChrX	stalkie_big_nohaplotig	exon	35418646	35419189	99	-	.	Parent=comp140222_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35418646	35419035	.	-	0	Parent=comp140222_c0_seq1.mrna1
ChrX	gffcl	locus	35470166	35474285	.	-	.	ID=RLOC_00002111;geneIDs=FBgn0031298.1.path1,comp158197_c0_seq1.path1;transcripts=comp158197_c0_seq1.mrna1,FBgn0031298.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35470166	35474285	.	-	.	ID=comp158197_c0_seq1.mrna1;geneID=comp158197_c0_seq1.path1;Name=comp158197_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=2592;mismatches=4;indels=0;unknowns=0;locus=RLOC_00002111
ChrX	stalkie_big_nohaplotig	exon	35470166	35470688	99	-	.	Parent=comp158197_c0_seq1.mrna1;Target=comp158197_c0_seq1 1 523 -
ChrX	stalkie_big_nohaplotig	exon	35471759	35471929	100	-	.	Parent=comp158197_c0_seq1.mrna1;Target=comp158197_c0_seq1 524 694 -
ChrX	stalkie_big_nohaplotig	exon	35472117	35472417	100	-	.	Parent=comp158197_c0_seq1.mrna1;Target=comp158197_c0_seq1 695 995 -
ChrX	stalkie_big_nohaplotig	exon	35472483	35472832	100	-	.	Parent=comp158197_c0_seq1.mrna1;Target=comp158197_c0_seq1 996 1345 -
ChrX	stalkie_big_nohaplotig	exon	35472893	35472972	100	-	.	Parent=comp158197_c0_seq1.mrna1;Target=comp158197_c0_seq1 1346 1425 -
ChrX	stalkie_big_nohaplotig	exon	35473045	35473387	99	-	.	Parent=comp158197_c0_seq1.mrna1;Target=comp158197_c0_seq1 1426 1768 -
ChrX	stalkie_big_nohaplotig	exon	35473458	35474285	100	-	.	Parent=comp158197_c0_seq1.mrna1;Target=comp158197_c0_seq1 1769 2596 -
ChrX	stalkie_big_nohaplotig	CDS	35471832	35471929	.	-	2	Parent=comp158197_c0_seq1.mrna1;Target=comp158197_c0_seq1 597 694 .
ChrX	stalkie_big_nohaplotig	CDS	35472117	35472417	.	-	0	Parent=comp158197_c0_seq1.mrna1;Target=comp158197_c0_seq1 695 995 .
ChrX	stalkie_big_nohaplotig	CDS	35472483	35472832	.	-	2	Parent=comp158197_c0_seq1.mrna1;Target=comp158197_c0_seq1 996 1345 .
ChrX	stalkie_big_nohaplotig	CDS	35472893	35472972	.	-	1	Parent=comp158197_c0_seq1.mrna1;Target=comp158197_c0_seq1 1346 1425 .
ChrX	stalkie_big_nohaplotig	CDS	35473045	35473387	.	-	2	Parent=comp158197_c0_seq1.mrna1;Target=comp158197_c0_seq1 1426 1768 .
ChrX	stalkie_big_nohaplotig	CDS	35473458	35473596	.	-	0	Parent=comp158197_c0_seq1.mrna1;Target=comp158197_c0_seq1 1769 1907 .
ChrX	stalkie_big_nohaplotig	mRNA	35471835	35473863	.	-	.	ID=FBgn0031298.1.mrna1;geneID=FBgn0031298.1.path1;Name=FBgn0031298.1;Dir=sensecoverage=100.0;identity=99.9;matches=1405;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002111
ChrX	stalkie_big_nohaplotig	exon	35471835	35471929	100	-	.	Parent=FBgn0031298.1.mrna1;Target=FBgn0031298.1 1313 1407 +
ChrX	stalkie_big_nohaplotig	exon	35472285	35472417	100	-	.	Parent=FBgn0031298.1.mrna1;Target=FBgn0031298.1 1180 1312 +
ChrX	stalkie_big_nohaplotig	exon	35472483	35472832	100	-	.	Parent=FBgn0031298.1.mrna1;Target=FBgn0031298.1 830 1179 +
ChrX	stalkie_big_nohaplotig	exon	35472893	35472972	100	-	.	Parent=FBgn0031298.1.mrna1;Target=FBgn0031298.1 750 829 +
ChrX	stalkie_big_nohaplotig	exon	35473045	35473387	99	-	.	Parent=FBgn0031298.1.mrna1;Target=FBgn0031298.1 407 749 +
ChrX	stalkie_big_nohaplotig	exon	35473458	35473863	100	-	.	Parent=FBgn0031298.1.mrna1;Target=FBgn0031298.1 1 406 +
ChrX	stalkie_big_nohaplotig	CDS	35471835	35471929	.	-	2	Parent=FBgn0031298.1.mrna1;Target=FBgn0031298.1 1313 1407 +
ChrX	stalkie_big_nohaplotig	CDS	35472285	35472417	.	-	0	Parent=FBgn0031298.1.mrna1;Target=FBgn0031298.1 1180 1312 +
ChrX	stalkie_big_nohaplotig	CDS	35472483	35472832	.	-	2	Parent=FBgn0031298.1.mrna1;Target=FBgn0031298.1 830 1179 +
ChrX	stalkie_big_nohaplotig	CDS	35472893	35472972	.	-	1	Parent=FBgn0031298.1.mrna1;Target=FBgn0031298.1 750 829 +
ChrX	stalkie_big_nohaplotig	CDS	35473045	35473387	.	-	2	Parent=FBgn0031298.1.mrna1;Target=FBgn0031298.1 407 749 +
ChrX	stalkie_big_nohaplotig	CDS	35473458	35473863	.	-	0	Parent=FBgn0031298.1.mrna1;Target=FBgn0031298.1 1 406 +
ChrX	gffcl	locus	35479107	35480720	.	-	.	ID=RLOC_00002112;geneIDs=FBgn0015905.1.path1;transcripts=FBgn0015905.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35479107	35480720	.	-	.	ID=FBgn0015905.1.mrna1;geneID=FBgn0015905.1.path1;Name=FBgn0015905.1;Dir=sensecoverage=100.0;identity=99.7;matches=1552;mismatches=5;indels=0;unknowns=0;locus=RLOC_00002112
ChrX	stalkie_big_nohaplotig	exon	35479107	35479667	100	-	.	Parent=FBgn0015905.1.mrna1;Target=FBgn0015905.1 997 1557 +
ChrX	stalkie_big_nohaplotig	exon	35479725	35480720	99	-	.	Parent=FBgn0015905.1.mrna1;Target=FBgn0015905.1 1 996 +
ChrX	stalkie_big_nohaplotig	CDS	35479107	35479667	.	-	0	Parent=FBgn0015905.1.mrna1;Target=FBgn0015905.1 997 1557 +
ChrX	stalkie_big_nohaplotig	CDS	35479725	35480720	.	-	0	Parent=FBgn0015905.1.mrna1;Target=FBgn0015905.1 1 996 +
ChrX	gffcl	locus	35541373	35568554	.	+	.	ID=RLOC_00002113;geneIDs=FBgn0003310.1.path1;transcripts=FBgn0003310.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35541373	35568554	.	+	.	ID=FBgn0003310.1.mrna1;geneID=FBgn0003310.1.path1;Name=FBgn0003310.1;Dir=sensecoverage=100.0;identity=100.0;matches=1980;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002113
ChrX	stalkie_big_nohaplotig	exon	35541373	35542531	100	+	.	Parent=FBgn0003310.1.mrna1;Target=FBgn0003310.1 1 1159 +
ChrX	stalkie_big_nohaplotig	exon	35563856	35564310	100	+	.	Parent=FBgn0003310.1.mrna1;Target=FBgn0003310.1 1160 1614 +
ChrX	stalkie_big_nohaplotig	exon	35564389	35564559	100	+	.	Parent=FBgn0003310.1.mrna1;Target=FBgn0003310.1 1615 1785 +
ChrX	stalkie_big_nohaplotig	exon	35568360	35568554	100	+	.	Parent=FBgn0003310.1.mrna1;Target=FBgn0003310.1 1786 1980 +
ChrX	stalkie_big_nohaplotig	CDS	35541373	35542531	.	+	0	Parent=FBgn0003310.1.mrna1;Target=FBgn0003310.1 1 1159 +
ChrX	stalkie_big_nohaplotig	CDS	35563856	35564310	.	+	2	Parent=FBgn0003310.1.mrna1;Target=FBgn0003310.1 1160 1614 +
ChrX	stalkie_big_nohaplotig	CDS	35564389	35564559	.	+	0	Parent=FBgn0003310.1.mrna1;Target=FBgn0003310.1 1615 1785 +
ChrX	stalkie_big_nohaplotig	CDS	35568360	35568554	.	+	0	Parent=FBgn0003310.1.mrna1;Target=FBgn0003310.1 1786 1980 +
ChrX	gffcl	locus	35570243	35570493	.	-	.	ID=RLOC_00002114;geneIDs=comp117238_c0_seq1.path1;transcripts=comp117238_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35570243	35570493	.	-	.	ID=comp117238_c0_seq1.mrna1;geneID=comp117238_c0_seq1.path1;Name=comp117238_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=250;mismatches=0;indels=1;unknowns=0;Target=comp117238_c0_seq1 250 1 .;CDS_Target=comp117238_c0_seq1 27 1 .;locus=RLOC_00002114
ChrX	stalkie_big_nohaplotig	exon	35570243	35570493	99	-	.	Parent=comp117238_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35570466	35570493	.	-	0	Parent=comp117238_c0_seq1.mrna1
ChrX	gffcl	locus	35723879	35724192	.	-	.	ID=RLOC_00002116;geneIDs=comp87075_c0_seq1.path1;transcripts=comp87075_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35723879	35724192	.	-	.	ID=comp87075_c0_seq1.mrna1;geneID=comp87075_c0_seq1.path1;Name=comp87075_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=314;mismatches=0;indels=0;unknowns=0;Target=comp87075_c0_seq1 314 1 .;CDS_Target=comp87075_c0_seq1 144 1 .;locus=RLOC_00002116
ChrX	stalkie_big_nohaplotig	exon	35723879	35724192	100	-	.	Parent=comp87075_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35724049	35724192	.	-	0	Parent=comp87075_c0_seq1.mrna1
ChrX	gffcl	locus	35724784	35725395	.	-	.	ID=RLOC_00002117;geneIDs=comp135082_c0_seq1.path1;transcripts=comp135082_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35724784	35725395	.	-	.	ID=comp135082_c0_seq1.mrna1;geneID=comp135082_c0_seq1.path1;Name=comp135082_c0_seq1;Dir=indeterminatecoverage=92.0;identity=99.8;matches=611;mismatches=1;indels=0;unknowns=0;Target=comp135082_c0_seq1 612 1 .;CDS_Target=comp135082_c0_seq1 612 506 .;locus=RLOC_00002117
ChrX	stalkie_big_nohaplotig	exon	35724784	35725395	99	-	.	Parent=comp135082_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35724784	35724890	.	-	0	Parent=comp135082_c0_seq1.mrna1
ChrX	gffcl	locus	35725553	35727395	.	+	.	ID=RLOC_00002118;geneIDs=comp156786_c0_seq1.path1;transcripts=comp156786_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35725553	35727395	.	+	.	ID=comp156786_c0_seq1.mrna1;geneID=comp156786_c0_seq1.path1;Name=comp156786_c0_seq1;Dir=indeterminatecoverage=97.7;identity=99.7;matches=1839;mismatches=4;indels=2;unknowns=0;Target=comp156786_c0_seq1 1845 1 .;CDS_Target=comp156786_c0_seq1 966 844 .;locus=RLOC_00002118
ChrX	stalkie_big_nohaplotig	exon	35725553	35727395	99	+	.	Parent=comp156786_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35726396	35726516	.	+	0	Parent=comp156786_c0_seq1.mrna1
ChrX	gffcl	locus	35728368	35729047	.	-	.	ID=RLOC_00002119;geneIDs=comp145344_c0_seq1.path1;transcripts=comp145344_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35728368	35729047	.	-	.	ID=comp145344_c0_seq1.mrna1;geneID=comp145344_c0_seq1.path1;Name=comp145344_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=679;mismatches=1;indels=1;unknowns=0;Target=comp145344_c0_seq1 681 1 .;CDS_Target=comp145344_c0_seq1 436 335 .;locus=RLOC_00002119
ChrX	stalkie_big_nohaplotig	exon	35728368	35729047	99	-	.	Parent=comp145344_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35728613	35728714	.	-	0	Parent=comp145344_c0_seq1.mrna1
ChrX	gffcl	locus	35729141	35729874	.	+	.	ID=RLOC_00002120;geneIDs=comp118996_c0_seq1.path1;transcripts=comp118996_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35729141	35729874	.	+	.	ID=comp118996_c0_seq1.mrna1;geneID=comp118996_c0_seq1.path1;Name=comp118996_c0_seq1;Dir=indeterminatecoverage=94.8;identity=100.0;matches=734;mismatches=0;indels=0;unknowns=0;Target=comp118996_c0_seq1 774 41 .;CDS_Target=comp118996_c0_seq1 551 486 .;locus=RLOC_00002120
ChrX	stalkie_big_nohaplotig	exon	35729141	35729874	100	+	.	Parent=comp118996_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35729586	35729651	.	+	0	Parent=comp118996_c0_seq1.mrna1
ChrX	gffcl	locus	35729906	35730575	.	+	.	ID=RLOC_00002121;geneIDs=comp143714_c0_seq1.path1;transcripts=comp143714_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35729906	35730575	.	+	.	ID=comp143714_c0_seq1.mrna1;geneID=comp143714_c0_seq1.path1;Name=comp143714_c0_seq1;Dir=indeterminatecoverage=92.5;identity=100.0;matches=670;mismatches=0;indels=0;unknowns=0;Target=comp143714_c0_seq1 724 55 .;CDS_Target=comp143714_c0_seq1 696 511 .;locus=RLOC_00002121
ChrX	stalkie_big_nohaplotig	exon	35729906	35730575	100	+	.	Parent=comp143714_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35730362	35730547	.	+	0	Parent=comp143714_c0_seq1.mrna1
ChrX	gffcl	locus	35731946	35733666	.	+	.	ID=RLOC_00002122;geneIDs=comp135830_c0_seq1.path1;transcripts=comp135830_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35731946	35733666	.	+	.	ID=comp135830_c0_seq1.mrna1;geneID=comp135830_c0_seq1.path1;Name=comp135830_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1715;mismatches=0;indels=6;unknowns=0;Target=comp135830_c0_seq1 1715 1 .;CDS_Target=comp135830_c0_seq1 1403 1305 .;locus=RLOC_00002122
ChrX	stalkie_big_nohaplotig	exon	35731946	35733666	99	+	.	Parent=comp135830_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35733256	35733354	.	+	0	Parent=comp135830_c0_seq1.mrna1
ChrX	gffcl	locus	35733738	35734817	.	-	.	ID=RLOC_00002123;geneIDs=comp153213_c0_seq1.path1;transcripts=comp153213_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35733738	35734817	.	-	.	ID=comp153213_c0_seq1.mrna1;geneID=comp153213_c0_seq1.path1;Name=comp153213_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=1080;mismatches=0;indels=0;unknowns=0;Target=comp153213_c0_seq1 1083 4 .;CDS_Target=comp153213_c0_seq1 74 6 .;locus=RLOC_00002123
ChrX	stalkie_big_nohaplotig	exon	35733738	35734817	100	-	.	Parent=comp153213_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35734747	35734815	.	-	0	Parent=comp153213_c0_seq1.mrna1
ChrX	gffcl	locus	35735317	35736999	.	.	.	ID=RLOC_00002124;geneIDs=comp126832_c0_seq1.path1,comp148169_c0_seq1.path1;transcripts=comp126832_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35735830	35736999	.	+	.	ID=comp126832_c0_seq1.mrna1;geneID=comp126832_c0_seq1.path1;Name=comp126832_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.8;matches=1168;mismatches=2;indels=0;unknowns=0;Target=comp126832_c0_seq1 1180 11 .;CDS_Target=comp126832_c0_seq1 473 336 .;locus=RLOC_00002124
ChrX	stalkie_big_nohaplotig	exon	35735830	35736999	99	+	.	Parent=comp126832_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35736155	35736292	.	+	0	Parent=comp126832_c0_seq1.mrna1
ChrX	gffcl	locus	35740799	35741115	.	-	.	ID=RLOC_00002125;geneIDs=comp160090_c0_seq1.path1;transcripts=comp160090_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35740799	35741115	.	-	.	ID=comp160090_c0_seq1.mrna1;geneID=comp160090_c0_seq1.path1;Name=comp160090_c0_seq1;Dir=indeterminatecoverage=66.3;identity=93.0;matches=307;mismatches=10;indels=13;unknowns=0;Target=comp160090_c0_seq1 330 1 .;CDS_Target=comp160090_c0_seq1 64 2 .;locus=RLOC_00002125
ChrX	stalkie_big_nohaplotig	exon	35740799	35741115	93	-	.	Parent=comp160090_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35741052	35741114	.	-	0	Parent=comp160090_c0_seq1.mrna1
ChrX	gffcl	locus	35779989	35780914	.	-	.	ID=RLOC_00002127;geneIDs=comp160957_c0_seq1.path1;transcripts=comp160957_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35779989	35780914	.	-	.	ID=comp160957_c0_seq1.mrna1;geneID=comp160957_c0_seq1.path1;Name=comp160957_c0_seq1;Dir=sensecoverage=98.0;identity=98.9;matches=784;mismatches=9;indels=0;unknowns=0;locus=RLOC_00002127
ChrX	stalkie_big_nohaplotig	exon	35779989	35780271	99	-	.	Parent=comp160957_c0_seq1.mrna1;Target=comp160957_c0_seq1 527 809 +
ChrX	stalkie_big_nohaplotig	exon	35780341	35780684	99	-	.	Parent=comp160957_c0_seq1.mrna1;Target=comp160957_c0_seq1 183 526 +
ChrX	stalkie_big_nohaplotig	exon	35780749	35780914	95	-	.	Parent=comp160957_c0_seq1.mrna1;Target=comp160957_c0_seq1 17 182 +
ChrX	stalkie_big_nohaplotig	CDS	35780137	35780271	.	-	0	Parent=comp160957_c0_seq1.mrna1;Target=comp160957_c0_seq1 527 661 +
ChrX	stalkie_big_nohaplotig	CDS	35780341	35780684	.	-	2	Parent=comp160957_c0_seq1.mrna1;Target=comp160957_c0_seq1 183 526 +
ChrX	stalkie_big_nohaplotig	CDS	35780749	35780758	.	-	0	Parent=comp160957_c0_seq1.mrna1;Target=comp160957_c0_seq1 173 182 +
ChrX	gffcl	locus	35785443	35786297	.	+	.	ID=RLOC_00002128;geneIDs=FBgn0031596.1.path1;transcripts=FBgn0031596.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35785443	35786297	.	+	.	ID=FBgn0031596.1.mrna1;geneID=FBgn0031596.1.path1;Name=FBgn0031596.1;Dir=sensecoverage=100.0;identity=100.0;matches=708;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002128
ChrX	stalkie_big_nohaplotig	exon	35785443	35785670	100	+	.	Parent=FBgn0031596.1.mrna1;Target=FBgn0031596.1 1 228 +
ChrX	stalkie_big_nohaplotig	exon	35785759	35786124	100	+	.	Parent=FBgn0031596.1.mrna1;Target=FBgn0031596.1 229 594 +
ChrX	stalkie_big_nohaplotig	exon	35786184	35786297	100	+	.	Parent=FBgn0031596.1.mrna1;Target=FBgn0031596.1 595 708 +
ChrX	stalkie_big_nohaplotig	CDS	35785443	35785670	.	+	0	Parent=FBgn0031596.1.mrna1;Target=FBgn0031596.1 1 228 +
ChrX	stalkie_big_nohaplotig	CDS	35785759	35786124	.	+	0	Parent=FBgn0031596.1.mrna1;Target=FBgn0031596.1 229 594 +
ChrX	stalkie_big_nohaplotig	CDS	35786184	35786297	.	+	0	Parent=FBgn0031596.1.mrna1;Target=FBgn0031596.1 595 708 +
ChrX	gffcl	locus	35843574	35919773	.	+	.	ID=RLOC_00002129;geneIDs=FBgn0026319.1.path1;transcripts=FBgn0026319.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35843574	35919773	.	+	.	ID=FBgn0026319.1.mrna1;geneID=FBgn0026319.1.path1;Name=FBgn0026319.1;Dir=sensecoverage=100.0;identity=99.9;matches=1468;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002129
ChrX	stalkie_big_nohaplotig	exon	35843574	35843849	100	+	.	Parent=FBgn0026319.1.mrna1;Target=FBgn0026319.1 1 276 +
ChrX	stalkie_big_nohaplotig	exon	35915139	35915243	100	+	.	Parent=FBgn0026319.1.mrna1;Target=FBgn0026319.1 277 381 +
ChrX	stalkie_big_nohaplotig	exon	35918685	35919773	99	+	.	Parent=FBgn0026319.1.mrna1;Target=FBgn0026319.1 382 1470 +
ChrX	stalkie_big_nohaplotig	CDS	35843574	35843849	.	+	0	Parent=FBgn0026319.1.mrna1;Target=FBgn0026319.1 1 276 +
ChrX	stalkie_big_nohaplotig	CDS	35915139	35915243	.	+	0	Parent=FBgn0026319.1.mrna1;Target=FBgn0026319.1 277 381 +
ChrX	stalkie_big_nohaplotig	CDS	35918685	35919773	.	+	0	Parent=FBgn0026319.1.mrna1;Target=FBgn0026319.1 382 1470 +
ChrX	gffcl	locus	35896453	35897722	.	+	.	ID=RLOC_00002130;geneIDs=comp161938_c0_seq1.path1;transcripts=comp161938_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35896453	35897722	.	+	.	ID=comp161938_c0_seq1.mrna1;geneID=comp161938_c0_seq1.path1;Name=comp161938_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.2;matches=1248;mismatches=16;indels=20;unknowns=0;Target=comp161938_c0_seq1 1278 1 .;CDS_Target=comp161938_c0_seq1 362 135 .;locus=RLOC_00002130
ChrX	stalkie_big_nohaplotig	exon	35896453	35897722	97	+	.	Parent=comp161938_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35896590	35896817	.	+	0	Parent=comp161938_c0_seq1.mrna1
ChrX	gffcl	locus	35897724	35897955	.	+	.	ID=RLOC_00002131;geneIDs=comp205339_c0_seq1.path2;transcripts=comp205339_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	35897724	35897955	.	+	.	ID=comp205339_c0_seq1.mrna2;geneID=comp205339_c0_seq1.path2;Name=comp205339_c0_seq1;Dir=indeterminatecoverage=85.0;identity=99.1;matches=230;mismatches=2;indels=0;unknowns=0;Target=comp205339_c0_seq1 273 42 .;CDS_Target=comp205339_c0_seq1 121 74 .;locus=RLOC_00002131
ChrX	stalkie_big_nohaplotig	exon	35897724	35897955	99	+	.	Parent=comp205339_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	35897756	35897803	.	+	0	Parent=comp205339_c0_seq1.mrna2
ChrX	gffcl	locus	35903053	35904010	.	+	.	ID=RLOC_00002132;geneIDs=comp152523_c1_seq1.path2;transcripts=comp152523_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	35903053	35904010	.	+	.	ID=comp152523_c1_seq1.mrna2;geneID=comp152523_c1_seq1.path2;Name=comp152523_c1_seq1;Dir=indeterminatecoverage=99.0;identity=97.8;matches=941;mismatches=0;indels=21;unknowns=0;Target=comp152523_c1_seq1 946 2 .;CDS_Target=comp152523_c1_seq1 709 650 .;locus=RLOC_00002132
ChrX	stalkie_big_nohaplotig	exon	35903053	35904010	97	+	.	Parent=comp152523_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	35903712	35903773	.	+	0	Parent=comp152523_c1_seq1.mrna2
ChrX	gffcl	locus	35925759	35931935	.	-	.	ID=RLOC_00002133;geneIDs=FBgn0031598.1.path1;transcripts=FBgn0031598.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35925759	35931935	.	-	.	ID=FBgn0031598.1.mrna1;geneID=FBgn0031598.1.path1;Name=FBgn0031598.1;Dir=sensecoverage=100.0;identity=100.0;matches=2727;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002133
ChrX	stalkie_big_nohaplotig	exon	35925759	35926692	100	-	.	Parent=FBgn0031598.1.mrna1;Target=FBgn0031598.1 1794 2727 +
ChrX	stalkie_big_nohaplotig	exon	35929049	35929304	100	-	.	Parent=FBgn0031598.1.mrna1;Target=FBgn0031598.1 1538 1793 +
ChrX	stalkie_big_nohaplotig	exon	35929373	35929545	100	-	.	Parent=FBgn0031598.1.mrna1;Target=FBgn0031598.1 1365 1537 +
ChrX	stalkie_big_nohaplotig	exon	35929623	35930169	100	-	.	Parent=FBgn0031598.1.mrna1;Target=FBgn0031598.1 818 1364 +
ChrX	stalkie_big_nohaplotig	exon	35930964	35931168	100	-	.	Parent=FBgn0031598.1.mrna1;Target=FBgn0031598.1 613 817 +
ChrX	stalkie_big_nohaplotig	exon	35931242	35931748	100	-	.	Parent=FBgn0031598.1.mrna1;Target=FBgn0031598.1 106 612 +
ChrX	stalkie_big_nohaplotig	exon	35931831	35931935	100	-	.	Parent=FBgn0031598.1.mrna1;Target=FBgn0031598.1 1 105 +
ChrX	stalkie_big_nohaplotig	CDS	35925759	35926692	.	-	1	Parent=FBgn0031598.1.mrna1;Target=FBgn0031598.1 1794 2727 +
ChrX	stalkie_big_nohaplotig	CDS	35929049	35929304	.	-	2	Parent=FBgn0031598.1.mrna1;Target=FBgn0031598.1 1538 1793 +
ChrX	stalkie_big_nohaplotig	CDS	35929373	35929545	.	-	1	Parent=FBgn0031598.1.mrna1;Target=FBgn0031598.1 1365 1537 +
ChrX	stalkie_big_nohaplotig	CDS	35929623	35930169	.	-	2	Parent=FBgn0031598.1.mrna1;Target=FBgn0031598.1 818 1364 +
ChrX	stalkie_big_nohaplotig	CDS	35930964	35931168	.	-	0	Parent=FBgn0031598.1.mrna1;Target=FBgn0031598.1 613 817 +
ChrX	stalkie_big_nohaplotig	CDS	35931242	35931748	.	-	0	Parent=FBgn0031598.1.mrna1;Target=FBgn0031598.1 106 612 +
ChrX	stalkie_big_nohaplotig	CDS	35931831	35931935	.	-	0	Parent=FBgn0031598.1.mrna1;Target=FBgn0031598.1 1 105 +
ChrX	gffcl	locus	35934599	35935258	.	-	.	ID=RLOC_00002134;geneIDs=FBgn0261976.1.path1;transcripts=FBgn0261976.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35934599	35935258	.	-	.	ID=FBgn0261976.1.mrna1;geneID=FBgn0261976.1.path1;Name=FBgn0261976.1;Dir=sensecoverage=100.0;identity=100.0;matches=594;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002134
ChrX	stalkie_big_nohaplotig	exon	35934599	35934947	100	-	.	Parent=FBgn0261976.1.mrna1;Target=FBgn0261976.1 246 594 +
ChrX	stalkie_big_nohaplotig	exon	35935014	35935258	100	-	.	Parent=FBgn0261976.1.mrna1;Target=FBgn0261976.1 1 245 +
ChrX	stalkie_big_nohaplotig	CDS	35934599	35934947	.	-	1	Parent=FBgn0261976.1.mrna1;Target=FBgn0261976.1 246 594 +
ChrX	stalkie_big_nohaplotig	CDS	35935014	35935258	.	-	0	Parent=FBgn0261976.1.mrna1;Target=FBgn0261976.1 1 245 +
ChrX	gffcl	locus	35935977	35936308	.	+	.	ID=RLOC_00002135;geneIDs=comp141681_c0_seq1.path1;transcripts=comp141681_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35935977	35936308	.	+	.	ID=comp141681_c0_seq1.mrna1;geneID=comp141681_c0_seq1.path1;Name=comp141681_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=331;mismatches=1;indels=0;unknowns=0;Target=comp141681_c0_seq1 332 1 .;CDS_Target=comp141681_c0_seq1 67 2 .;locus=RLOC_00002135
ChrX	stalkie_big_nohaplotig	exon	35935977	35936308	99	+	.	Parent=comp141681_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35935978	35936043	.	+	0	Parent=comp141681_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37735190	37740339	.	+	.	ID=FBgn0040211.1.mrna1;geneID=FBgn0040211.1.path1;Name=FBgn0040211.1;Dir=sensecoverage=100.0;identity=100.0;matches=1362;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002136
ChrX	stalkie_big_nohaplotig	exon	37735190	37735255	100	+	.	Parent=FBgn0040211.1.mrna1;Target=FBgn0040211.1 1 66 +
ChrX	stalkie_big_nohaplotig	exon	37737323	37737592	100	+	.	Parent=FBgn0040211.1.mrna1;Target=FBgn0040211.1 67 336 +
ChrX	stalkie_big_nohaplotig	exon	37737669	37737852	100	+	.	Parent=FBgn0040211.1.mrna1;Target=FBgn0040211.1 337 520 +
ChrX	stalkie_big_nohaplotig	exon	37738243	37738363	100	+	.	Parent=FBgn0040211.1.mrna1;Target=FBgn0040211.1 521 641 +
ChrX	stalkie_big_nohaplotig	exon	37738431	37738561	100	+	.	Parent=FBgn0040211.1.mrna1;Target=FBgn0040211.1 642 772 +
ChrX	stalkie_big_nohaplotig	exon	37738638	37738919	100	+	.	Parent=FBgn0040211.1.mrna1;Target=FBgn0040211.1 773 1054 +
ChrX	stalkie_big_nohaplotig	exon	37739951	37740132	100	+	.	Parent=FBgn0040211.1.mrna1;Target=FBgn0040211.1 1055 1236 +
ChrX	stalkie_big_nohaplotig	exon	37740214	37740339	100	+	.	Parent=FBgn0040211.1.mrna1;Target=FBgn0040211.1 1237 1362 +
ChrX	stalkie_big_nohaplotig	CDS	37735190	37735255	.	+	0	Parent=FBgn0040211.1.mrna1;Target=FBgn0040211.1 1 66 +
ChrX	stalkie_big_nohaplotig	CDS	37737323	37737592	.	+	0	Parent=FBgn0040211.1.mrna1;Target=FBgn0040211.1 67 336 +
ChrX	stalkie_big_nohaplotig	CDS	37737669	37737852	.	+	0	Parent=FBgn0040211.1.mrna1;Target=FBgn0040211.1 337 520 +
ChrX	stalkie_big_nohaplotig	CDS	37738243	37738363	.	+	2	Parent=FBgn0040211.1.mrna1;Target=FBgn0040211.1 521 641 +
ChrX	stalkie_big_nohaplotig	CDS	37738431	37738561	.	+	1	Parent=FBgn0040211.1.mrna1;Target=FBgn0040211.1 642 772 +
ChrX	stalkie_big_nohaplotig	CDS	37738638	37738919	.	+	2	Parent=FBgn0040211.1.mrna1;Target=FBgn0040211.1 773 1054 +
ChrX	stalkie_big_nohaplotig	CDS	37739951	37740132	.	+	2	Parent=FBgn0040211.1.mrna1;Target=FBgn0040211.1 1055 1236 +
ChrX	stalkie_big_nohaplotig	CDS	37740214	37740339	.	+	0	Parent=FBgn0040211.1.mrna1;Target=FBgn0040211.1 1237 1362 +
ChrX	gffcl	locus	35942517	35943133	.	-	.	ID=RLOC_00002137;geneIDs=comp151903_c0_seq1.path1;transcripts=comp151903_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35942517	35943133	.	-	.	ID=comp151903_c0_seq1.mrna1;geneID=comp151903_c0_seq1.path1;Name=comp151903_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=617;mismatches=0;indels=7;unknowns=0;Target=comp151903_c0_seq1 624 1 .;CDS_Target=comp151903_c0_seq1 69 1 .;locus=RLOC_00002137
ChrX	stalkie_big_nohaplotig	exon	35942517	35943133	98	-	.	Parent=comp151903_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	35943065	35943133	.	-	0	Parent=comp151903_c0_seq1.mrna1
ChrX	gffcl	locus	35943482	35944470	.	-	.	ID=RLOC_00002138;geneIDs=comp134740_c0_seq1.path1;transcripts=comp134740_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35943482	35944470	.	-	.	ID=comp134740_c0_seq1.mrna1;geneID=comp134740_c0_seq1.path1;Name=comp134740_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=919;mismatches=4;indels=0;unknowns=0;locus=RLOC_00002138
ChrX	stalkie_big_nohaplotig	exon	35943482	35943822	99	-	.	Parent=comp134740_c0_seq1.mrna1;Target=comp134740_c0_seq1 1 341 -
ChrX	stalkie_big_nohaplotig	exon	35943889	35944470	99	-	.	Parent=comp134740_c0_seq1.mrna1;Target=comp134740_c0_seq1 342 923 -
ChrX	stalkie_big_nohaplotig	CDS	35943712	35943822	.	-	0	Parent=comp134740_c0_seq1.mrna1;Target=comp134740_c0_seq1 231 341 .
ChrX	stalkie_big_nohaplotig	CDS	35943889	35944266	.	-	0	Parent=comp134740_c0_seq1.mrna1;Target=comp134740_c0_seq1 342 719 .
ChrX	gffcl	locus	35946580	35947435	.	+	.	ID=RLOC_00002139;geneIDs=FBgn0000339.1.path1;transcripts=FBgn0000339.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35946580	35947435	.	+	.	ID=FBgn0000339.1.mrna1;geneID=FBgn0000339.1.path1;Name=FBgn0000339.1;Dir=sensecoverage=97.6;identity=100.0;matches=448;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002139
ChrX	stalkie_big_nohaplotig	exon	35946580	35946745	100	+	.	Parent=FBgn0000339.1.mrna1;Target=FBgn0000339.1 12 177 +
ChrX	stalkie_big_nohaplotig	exon	35946801	35946913	100	+	.	Parent=FBgn0000339.1.mrna1;Target=FBgn0000339.1 178 290 +
ChrX	stalkie_big_nohaplotig	exon	35947204	35947347	100	+	.	Parent=FBgn0000339.1.mrna1;Target=FBgn0000339.1 291 434 +
ChrX	stalkie_big_nohaplotig	exon	35947411	35947435	100	+	.	Parent=FBgn0000339.1.mrna1;Target=FBgn0000339.1 435 459 +
ChrX	stalkie_big_nohaplotig	CDS	35946581	35946745	.	+	0	Parent=FBgn0000339.1.mrna1;Target=FBgn0000339.1 13 177 +
ChrX	stalkie_big_nohaplotig	CDS	35946801	35946913	.	+	0	Parent=FBgn0000339.1.mrna1;Target=FBgn0000339.1 178 290 +
ChrX	stalkie_big_nohaplotig	CDS	35947204	35947347	.	+	1	Parent=FBgn0000339.1.mrna1;Target=FBgn0000339.1 291 434 +
ChrX	stalkie_big_nohaplotig	CDS	35947411	35947435	.	+	1	Parent=FBgn0000339.1.mrna1;Target=FBgn0000339.1 435 459 +
ChrX	gffcl	locus	35951189	35951833	.	-	.	ID=RLOC_00002140;geneIDs=FBgn0031315.1.path1;transcripts=FBgn0031315.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35951189	35951833	.	-	.	ID=FBgn0031315.1.mrna1;geneID=FBgn0031315.1.path1;Name=FBgn0031315.1;Dir=sensecoverage=100.0;identity=100.0;matches=591;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002140
ChrX	stalkie_big_nohaplotig	exon	35951189	35951350	100	-	.	Parent=FBgn0031315.1.mrna1;Target=FBgn0031315.1 430 591 +
ChrX	stalkie_big_nohaplotig	exon	35951405	35951833	100	-	.	Parent=FBgn0031315.1.mrna1;Target=FBgn0031315.1 1 429 +
ChrX	stalkie_big_nohaplotig	CDS	35951189	35951350	.	-	0	Parent=FBgn0031315.1.mrna1;Target=FBgn0031315.1 430 591 +
ChrX	stalkie_big_nohaplotig	CDS	35951405	35951833	.	-	0	Parent=FBgn0031315.1.mrna1;Target=FBgn0031315.1 1 429 +
ChrX	gffcl	locus	35953586	35957081	.	+	.	ID=RLOC_00002141;geneIDs=FBgn0024314.1.path1,comp105018_c0_seq1.path1;transcripts=FBgn0024314.1.mrna1,comp105018_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35953586	35957081	.	+	.	ID=FBgn0024314.1.mrna1;geneID=FBgn0024314.1.path1;Name=FBgn0024314.1;Dir=sensecoverage=100.0;identity=100.0;matches=2400;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002141
ChrX	stalkie_big_nohaplotig	exon	35953586	35953815	100	+	.	Parent=FBgn0024314.1.mrna1;Target=FBgn0024314.1 1 230 +
ChrX	stalkie_big_nohaplotig	exon	35953883	35954749	100	+	.	Parent=FBgn0024314.1.mrna1;Target=FBgn0024314.1 231 1097 +
ChrX	stalkie_big_nohaplotig	exon	35954800	35954986	100	+	.	Parent=FBgn0024314.1.mrna1;Target=FBgn0024314.1 1098 1284 +
ChrX	stalkie_big_nohaplotig	exon	35955042	35955238	100	+	.	Parent=FBgn0024314.1.mrna1;Target=FBgn0024314.1 1285 1481 +
ChrX	stalkie_big_nohaplotig	exon	35955296	35955432	100	+	.	Parent=FBgn0024314.1.mrna1;Target=FBgn0024314.1 1482 1618 +
ChrX	stalkie_big_nohaplotig	exon	35955487	35955565	100	+	.	Parent=FBgn0024314.1.mrna1;Target=FBgn0024314.1 1619 1697 +
ChrX	stalkie_big_nohaplotig	exon	35956138	35956277	100	+	.	Parent=FBgn0024314.1.mrna1;Target=FBgn0024314.1 1698 1837 +
ChrX	stalkie_big_nohaplotig	exon	35956519	35957081	100	+	.	Parent=FBgn0024314.1.mrna1;Target=FBgn0024314.1 1838 2400 +
ChrX	stalkie_big_nohaplotig	CDS	35953586	35953815	.	+	0	Parent=FBgn0024314.1.mrna1;Target=FBgn0024314.1 1 230 +
ChrX	stalkie_big_nohaplotig	CDS	35953883	35954749	.	+	1	Parent=FBgn0024314.1.mrna1;Target=FBgn0024314.1 231 1097 +
ChrX	stalkie_big_nohaplotig	CDS	35954800	35954986	.	+	1	Parent=FBgn0024314.1.mrna1;Target=FBgn0024314.1 1098 1284 +
ChrX	stalkie_big_nohaplotig	CDS	35955042	35955238	.	+	0	Parent=FBgn0024314.1.mrna1;Target=FBgn0024314.1 1285 1481 +
ChrX	stalkie_big_nohaplotig	CDS	35955296	35955432	.	+	1	Parent=FBgn0024314.1.mrna1;Target=FBgn0024314.1 1482 1618 +
ChrX	stalkie_big_nohaplotig	CDS	35955487	35955565	.	+	2	Parent=FBgn0024314.1.mrna1;Target=FBgn0024314.1 1619 1697 +
ChrX	stalkie_big_nohaplotig	CDS	35956138	35956277	.	+	1	Parent=FBgn0024314.1.mrna1;Target=FBgn0024314.1 1698 1837 +
ChrX	stalkie_big_nohaplotig	CDS	35956519	35957081	.	+	2	Parent=FBgn0024314.1.mrna1;Target=FBgn0024314.1 1838 2400 +
ChrX	stalkie_big_nohaplotig	mRNA	35955525	35956160	.	+	.	ID=comp105018_c0_seq1.mrna1;geneID=comp105018_c0_seq1.path1;Name=comp105018_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=574;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002141
ChrX	stalkie_big_nohaplotig	exon	35955525	35955548	100	+	.	Parent=comp105018_c0_seq1.mrna1;Target=comp105018_c0_seq1 551 574 -
ChrX	stalkie_big_nohaplotig	exon	35955611	35956160	100	+	.	Parent=comp105018_c0_seq1.mrna1;Target=comp105018_c0_seq1 1 550 -
ChrX	stalkie_big_nohaplotig	CDS	35955525	35955548	.	+	0	Parent=comp105018_c0_seq1.mrna1;Target=comp105018_c0_seq1 551 574 .
ChrX	stalkie_big_nohaplotig	CDS	35955611	35955823	.	+	0	Parent=comp105018_c0_seq1.mrna1;Target=comp105018_c0_seq1 338 550 .
ChrX	gffcl	locus	35960900	35962809	.	+	.	ID=RLOC_00002142;geneIDs=FBgn0031633.1.path1;transcripts=FBgn0031633.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35960900	35962809	.	+	.	ID=FBgn0031633.1.mrna1;geneID=FBgn0031633.1.path1;Name=FBgn0031633.1;Dir=sensecoverage=100.0;identity=100.0;matches=993;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002142
ChrX	stalkie_big_nohaplotig	exon	35960900	35961050	100	+	.	Parent=FBgn0031633.1.mrna1;Target=FBgn0031633.1 1 151 +
ChrX	stalkie_big_nohaplotig	exon	35961107	35961461	100	+	.	Parent=FBgn0031633.1.mrna1;Target=FBgn0031633.1 152 506 +
ChrX	stalkie_big_nohaplotig	exon	35962323	35962809	100	+	.	Parent=FBgn0031633.1.mrna1;Target=FBgn0031633.1 507 993 +
ChrX	stalkie_big_nohaplotig	CDS	35960900	35961050	.	+	0	Parent=FBgn0031633.1.mrna1;Target=FBgn0031633.1 1 151 +
ChrX	stalkie_big_nohaplotig	CDS	35961107	35961461	.	+	2	Parent=FBgn0031633.1.mrna1;Target=FBgn0031633.1 152 506 +
ChrX	stalkie_big_nohaplotig	CDS	35962323	35962809	.	+	1	Parent=FBgn0031633.1.mrna1;Target=FBgn0031633.1 507 993 +
ChrX	gffcl	locus	35986192	35991430	.	-	.	ID=RLOC_00002143;geneIDs=FBgn0027582.1.path1;transcripts=FBgn0027582.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35986192	35991430	.	-	.	ID=FBgn0027582.1.mrna1;geneID=FBgn0027582.1.path1;Name=FBgn0027582.1;Dir=sensecoverage=100.0;identity=100.0;matches=3585;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002143
ChrX	stalkie_big_nohaplotig	exon	35986192	35986308	100	-	.	Parent=FBgn0027582.1.mrna1;Target=FBgn0027582.1 3469 3585 +
ChrX	stalkie_big_nohaplotig	exon	35986373	35986516	100	-	.	Parent=FBgn0027582.1.mrna1;Target=FBgn0027582.1 3325 3468 +
ChrX	stalkie_big_nohaplotig	exon	35987790	35987922	100	-	.	Parent=FBgn0027582.1.mrna1;Target=FBgn0027582.1 3192 3324 +
ChrX	stalkie_big_nohaplotig	exon	35987994	35988136	100	-	.	Parent=FBgn0027582.1.mrna1;Target=FBgn0027582.1 3049 3191 +
ChrX	stalkie_big_nohaplotig	exon	35988194	35988390	100	-	.	Parent=FBgn0027582.1.mrna1;Target=FBgn0027582.1 2852 3048 +
ChrX	stalkie_big_nohaplotig	exon	35988454	35989363	100	-	.	Parent=FBgn0027582.1.mrna1;Target=FBgn0027582.1 1942 2851 +
ChrX	stalkie_big_nohaplotig	exon	35989420	35990375	100	-	.	Parent=FBgn0027582.1.mrna1;Target=FBgn0027582.1 986 1941 +
ChrX	stalkie_big_nohaplotig	exon	35990446	35991430	100	-	.	Parent=FBgn0027582.1.mrna1;Target=FBgn0027582.1 1 985 +
ChrX	stalkie_big_nohaplotig	CDS	35986192	35986308	.	-	0	Parent=FBgn0027582.1.mrna1;Target=FBgn0027582.1 3469 3585 +
ChrX	stalkie_big_nohaplotig	CDS	35986373	35986516	.	-	0	Parent=FBgn0027582.1.mrna1;Target=FBgn0027582.1 3325 3468 +
ChrX	stalkie_big_nohaplotig	CDS	35987790	35987922	.	-	1	Parent=FBgn0027582.1.mrna1;Target=FBgn0027582.1 3192 3324 +
ChrX	stalkie_big_nohaplotig	CDS	35987994	35988136	.	-	0	Parent=FBgn0027582.1.mrna1;Target=FBgn0027582.1 3049 3191 +
ChrX	stalkie_big_nohaplotig	CDS	35988194	35988390	.	-	2	Parent=FBgn0027582.1.mrna1;Target=FBgn0027582.1 2852 3048 +
ChrX	stalkie_big_nohaplotig	CDS	35988454	35989363	.	-	0	Parent=FBgn0027582.1.mrna1;Target=FBgn0027582.1 1942 2851 +
ChrX	stalkie_big_nohaplotig	CDS	35989420	35990375	.	-	2	Parent=FBgn0027582.1.mrna1;Target=FBgn0027582.1 986 1941 +
ChrX	stalkie_big_nohaplotig	CDS	35990446	35991430	.	-	0	Parent=FBgn0027582.1.mrna1;Target=FBgn0027582.1 1 985 +
ChrX	gffcl	locus	35993191	35999972	.	.	.	ID=RLOC_00002144;geneIDs=comp143549_c0_seq1.path1,comp143549_c0_seq1.path2,comp145273_c0_seq1.path1;transcripts=comp145273_c0_seq1.mrna1,comp143549_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35993191	35997451	.	+	.	ID=comp145273_c0_seq1.mrna1;geneID=comp145273_c0_seq1.path1;Name=comp145273_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=739;mismatches=2;indels=0;unknowns=0;Target=comp145273_c0_seq1 272 394 +;locus=RLOC_00002144
ChrX	stalkie_big_nohaplotig	exon	35993191	35993420	99	+	.	Parent=comp145273_c0_seq1.mrna1;Target=comp145273_c0_seq1 1 230 +
ChrX	stalkie_big_nohaplotig	exon	35993929	35994107	100	+	.	Parent=comp145273_c0_seq1.mrna1;Target=comp145273_c0_seq1 231 409 +
ChrX	stalkie_big_nohaplotig	exon	35994239	35994311	100	+	.	Parent=comp145273_c0_seq1.mrna1;Target=comp145273_c0_seq1 410 482 +
ChrX	stalkie_big_nohaplotig	exon	35994618	35994750	100	+	.	Parent=comp145273_c0_seq1.mrna1;Target=comp145273_c0_seq1 483 615 +
ChrX	stalkie_big_nohaplotig	exon	35995298	35995311	100	+	.	Parent=comp145273_c0_seq1.mrna1;Target=comp145273_c0_seq1 616 629 +
ChrX	stalkie_big_nohaplotig	exon	35996249	35996311	100	+	.	Parent=comp145273_c0_seq1.mrna1;Target=comp145273_c0_seq1 630 692 +
ChrX	stalkie_big_nohaplotig	exon	35997403	35997451	100	+	.	Parent=comp145273_c0_seq1.mrna1;Target=comp145273_c0_seq1 693 741 +
ChrX	stalkie_big_nohaplotig	CDS	35993970	35994092	.	+	0	Parent=comp145273_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	35997461	35997505	.	-	.	ID=comp143549_c0_seq1.mrna1;geneID=comp143549_c0_seq1.path1;Name=comp143549_c0_seq1;Dir=indeterminatecoverage=1.7;identity=97.8;matches=44;mismatches=1;indels=0;unknowns=0;Target=comp143549_c0_seq1 45 1 .;locus=RLOC_00002144
ChrX	stalkie_big_nohaplotig	exon	35997461	35997505	97	-	.	Parent=comp143549_c0_seq1.mrna1
ChrX	gffcl	locus	36000341	36020066	.	-	.	ID=RLOC_00002145;geneIDs=FBgn0031630.1.path1;transcripts=FBgn0031630.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36000341	36020066	.	-	.	ID=FBgn0031630.1.mrna1;geneID=FBgn0031630.1.path1;Name=FBgn0031630.1;Dir=sensecoverage=100.0;identity=100.0;matches=933;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002145
ChrX	stalkie_big_nohaplotig	exon	36000341	36000440	100	-	.	Parent=FBgn0031630.1.mrna1;Target=FBgn0031630.1 834 933 +
ChrX	stalkie_big_nohaplotig	exon	36002598	36003198	100	-	.	Parent=FBgn0031630.1.mrna1;Target=FBgn0031630.1 233 833 +
ChrX	stalkie_big_nohaplotig	exon	36003563	36003680	100	-	.	Parent=FBgn0031630.1.mrna1;Target=FBgn0031630.1 115 232 +
ChrX	stalkie_big_nohaplotig	exon	36019885	36019959	100	-	.	Parent=FBgn0031630.1.mrna1;Target=FBgn0031630.1 40 114 +
ChrX	stalkie_big_nohaplotig	exon	36020028	36020066	100	-	.	Parent=FBgn0031630.1.mrna1;Target=FBgn0031630.1 1 39 +
ChrX	stalkie_big_nohaplotig	CDS	36000341	36000440	.	-	1	Parent=FBgn0031630.1.mrna1;Target=FBgn0031630.1 834 933 +
ChrX	stalkie_big_nohaplotig	CDS	36002598	36003198	.	-	2	Parent=FBgn0031630.1.mrna1;Target=FBgn0031630.1 233 833 +
ChrX	stalkie_big_nohaplotig	CDS	36003563	36003680	.	-	0	Parent=FBgn0031630.1.mrna1;Target=FBgn0031630.1 115 232 +
ChrX	stalkie_big_nohaplotig	CDS	36019885	36019959	.	-	0	Parent=FBgn0031630.1.mrna1;Target=FBgn0031630.1 40 114 +
ChrX	stalkie_big_nohaplotig	CDS	36020028	36020066	.	-	0	Parent=FBgn0031630.1.mrna1;Target=FBgn0031630.1 1 39 +
ChrX	gffcl	locus	36026589	36027333	.	-	.	ID=RLOC_00002146;geneIDs=comp148782_c0_seq1.path1;transcripts=comp148782_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36026589	36027333	.	-	.	ID=comp148782_c0_seq1.mrna1;geneID=comp148782_c0_seq1.path1;Name=comp148782_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=735;mismatches=1;indels=9;unknowns=0;Target=comp148782_c0_seq1 736 1 .;CDS_Target=comp148782_c0_seq1 600 487 .;locus=RLOC_00002146
ChrX	stalkie_big_nohaplotig	exon	36026589	36027333	98	-	.	Parent=comp148782_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36026725	36026838	.	-	0	Parent=comp148782_c0_seq1.mrna1
ChrX	gffcl	locus	36027396	36031610	.	-	.	ID=RLOC_00002147;geneIDs=FBgn0032636.1.path1;transcripts=FBgn0032636.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36027396	36031610	.	-	.	ID=FBgn0032636.1.mrna1;geneID=FBgn0032636.1.path1;Name=FBgn0032636.1;Dir=sensecoverage=100.0;identity=99.8;matches=1063;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002147
ChrX	stalkie_big_nohaplotig	exon	36027396	36027636	100	-	.	Parent=FBgn0032636.1.mrna1;Target=FBgn0032636.1 825 1065 +
ChrX	stalkie_big_nohaplotig	exon	36029074	36029207	100	-	.	Parent=FBgn0032636.1.mrna1;Target=FBgn0032636.1 691 824 +
ChrX	stalkie_big_nohaplotig	exon	36030792	36031160	99	-	.	Parent=FBgn0032636.1.mrna1;Target=FBgn0032636.1 322 690 +
ChrX	stalkie_big_nohaplotig	exon	36031290	36031610	100	-	.	Parent=FBgn0032636.1.mrna1;Target=FBgn0032636.1 1 321 +
ChrX	stalkie_big_nohaplotig	CDS	36027396	36027636	.	-	1	Parent=FBgn0032636.1.mrna1;Target=FBgn0032636.1 825 1065 +
ChrX	stalkie_big_nohaplotig	CDS	36029074	36029207	.	-	0	Parent=FBgn0032636.1.mrna1;Target=FBgn0032636.1 691 824 +
ChrX	stalkie_big_nohaplotig	CDS	36030792	36031160	.	-	0	Parent=FBgn0032636.1.mrna1;Target=FBgn0032636.1 322 690 +
ChrX	stalkie_big_nohaplotig	CDS	36031290	36031610	.	-	0	Parent=FBgn0032636.1.mrna1;Target=FBgn0032636.1 1 321 +
ChrX	gffcl	locus	36099725	36100108	.	+	.	ID=RLOC_00002149;geneIDs=comp118214_c1_seq1.path1;transcripts=comp118214_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36099725	36100108	.	+	.	ID=comp118214_c1_seq1.mrna1;geneID=comp118214_c1_seq1.path1;Name=comp118214_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=379;mismatches=5;indels=0;unknowns=0;Target=comp118214_c1_seq1 384 1 .;CDS_Target=comp118214_c1_seq1 116 3 .;locus=RLOC_00002149
ChrX	stalkie_big_nohaplotig	exon	36099725	36100108	98	+	.	Parent=comp118214_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36099727	36099840	.	+	0	Parent=comp118214_c1_seq1.mrna1
ChrX	gffcl	locus	36109401	36110382	.	+	.	ID=RLOC_00002150;geneIDs=comp62230_c0_seq1.path1;transcripts=comp62230_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36109401	36110382	.	+	.	ID=comp62230_c0_seq1.mrna1;geneID=comp62230_c0_seq1.path1;Name=comp62230_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=912;mismatches=0;indels=1;unknowns=0;locus=RLOC_00002150
ChrX	stalkie_big_nohaplotig	exon	36109401	36109686	100	+	.	Parent=comp62230_c0_seq1.mrna1;Target=comp62230_c0_seq1 628 913 -
ChrX	stalkie_big_nohaplotig	exon	36109757	36110382	99	+	.	Parent=comp62230_c0_seq1.mrna1;Target=comp62230_c0_seq1 1 627 -
ChrX	stalkie_big_nohaplotig	CDS	36109402	36109686	.	+	0	Parent=comp62230_c0_seq1.mrna1;Target=comp62230_c0_seq1 628 912 .
ChrX	stalkie_big_nohaplotig	CDS	36109757	36110023	.	+	0	Parent=comp62230_c0_seq1.mrna1;Target=comp62230_c0_seq1 361 627 .
ChrX	gffcl	locus	36115201	36119577	.	-	.	ID=RLOC_00002151;geneIDs=comp154904_c0_seq1.path1;transcripts=comp154904_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36115201	36119577	.	-	.	ID=comp154904_c0_seq1.mrna1;geneID=comp154904_c0_seq1.path1;Name=comp154904_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=576;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002151
ChrX	stalkie_big_nohaplotig	exon	36115201	36115268	100	-	.	Parent=comp154904_c0_seq1.mrna1;Target=comp154904_c0_seq1 1 68 -
ChrX	stalkie_big_nohaplotig	exon	36115386	36115676	100	-	.	Parent=comp154904_c0_seq1.mrna1;Target=comp154904_c0_seq1 69 359 -
ChrX	stalkie_big_nohaplotig	exon	36119361	36119577	100	-	.	Parent=comp154904_c0_seq1.mrna1;Target=comp154904_c0_seq1 360 576 -
ChrX	stalkie_big_nohaplotig	CDS	36115203	36115268	.	-	0	Parent=comp154904_c0_seq1.mrna1;Target=comp154904_c0_seq1 3 68 .
ChrX	stalkie_big_nohaplotig	CDS	36115386	36115676	.	-	0	Parent=comp154904_c0_seq1.mrna1;Target=comp154904_c0_seq1 69 359 .
ChrX	stalkie_big_nohaplotig	CDS	36119361	36119417	.	-	0	Parent=comp154904_c0_seq1.mrna1;Target=comp154904_c0_seq1 360 416 .
ChrX	gffcl	locus	36121115	36126125	.	-	.	ID=RLOC_00002152;geneIDs=ORF548.path1;transcripts=ORF548.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36121115	36126125	.	-	.	ID=ORF548.mrna1;geneID=ORF548.path1;Name=ORF548;Dir=sensecoverage=100.0;identity=99.1;matches=1650;mismatches=15;indels=0;unknowns=0;locus=RLOC_00002152
ChrX	stalkie_big_nohaplotig	exon	36121115	36121325	99	-	.	Parent=ORF548.mrna1;Target=ORF548 1455 1665 +
ChrX	stalkie_big_nohaplotig	exon	36121388	36121512	98	-	.	Parent=ORF548.mrna1;Target=ORF548 1330 1454 +
ChrX	stalkie_big_nohaplotig	exon	36121582	36121929	99	-	.	Parent=ORF548.mrna1;Target=ORF548 982 1329 +
ChrX	stalkie_big_nohaplotig	exon	36123154	36123439	100	-	.	Parent=ORF548.mrna1;Target=ORF548 696 981 +
ChrX	stalkie_big_nohaplotig	exon	36123618	36124242	98	-	.	Parent=ORF548.mrna1;Target=ORF548 71 695 +
ChrX	stalkie_big_nohaplotig	exon	36126056	36126125	100	-	.	Parent=ORF548.mrna1;Target=ORF548 1 70 +
ChrX	stalkie_big_nohaplotig	CDS	36121115	36121325	.	-	1	Parent=ORF548.mrna1;Target=ORF548 1455 1665 +
ChrX	stalkie_big_nohaplotig	CDS	36121388	36121512	.	-	0	Parent=ORF548.mrna1;Target=ORF548 1330 1454 +
ChrX	stalkie_big_nohaplotig	CDS	36121582	36121929	.	-	0	Parent=ORF548.mrna1;Target=ORF548 982 1329 +
ChrX	stalkie_big_nohaplotig	CDS	36123154	36123439	.	-	1	Parent=ORF548.mrna1;Target=ORF548 696 981 +
ChrX	stalkie_big_nohaplotig	CDS	36123618	36124242	.	-	2	Parent=ORF548.mrna1;Target=ORF548 71 695 +
ChrX	stalkie_big_nohaplotig	CDS	36126056	36126125	.	-	0	Parent=ORF548.mrna1;Target=ORF548 1 70 +
ChrX	gffcl	locus	36189639	36245536	.	+	.	ID=RLOC_00002154;geneIDs=FBgn0011274.1.path1,comp158630_c0_seq1.path1;transcripts=FBgn0011274.1.mrna1,comp158630_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36189639	36236633	.	+	.	ID=FBgn0011274.1.mrna1;geneID=FBgn0011274.1.path1;Name=FBgn0011274.1;Dir=sensecoverage=100.0;identity=100.0;matches=2444;mismatches=0;indels=1;unknowns=0;locus=RLOC_00002154
ChrX	stalkie_big_nohaplotig	exon	36189639	36189723	100	+	.	Parent=FBgn0011274.1.mrna1;Target=FBgn0011274.1 1 85 +
ChrX	stalkie_big_nohaplotig	exon	36225959	36226012	100	+	.	Parent=FBgn0011274.1.mrna1;Target=FBgn0011274.1 86 139 +
ChrX	stalkie_big_nohaplotig	exon	36234211	36234780	100	+	.	Parent=FBgn0011274.1.mrna1;Target=FBgn0011274.1 140 709 +
ChrX	stalkie_big_nohaplotig	exon	36234841	36235238	100	+	.	Parent=FBgn0011274.1.mrna1;Target=FBgn0011274.1 710 1107 +
ChrX	stalkie_big_nohaplotig	exon	36235297	36236633	99	+	.	Parent=FBgn0011274.1.mrna1;Target=FBgn0011274.1 1108 2445 +
ChrX	stalkie_big_nohaplotig	CDS	36189639	36189723	.	+	0	Parent=FBgn0011274.1.mrna1;Target=FBgn0011274.1 1 85 +
ChrX	stalkie_big_nohaplotig	CDS	36225959	36226012	.	+	2	Parent=FBgn0011274.1.mrna1;Target=FBgn0011274.1 86 139 +
ChrX	stalkie_big_nohaplotig	CDS	36234211	36234780	.	+	2	Parent=FBgn0011274.1.mrna1;Target=FBgn0011274.1 140 709 +
ChrX	stalkie_big_nohaplotig	CDS	36234841	36235238	.	+	2	Parent=FBgn0011274.1.mrna1;Target=FBgn0011274.1 710 1107 +
ChrX	stalkie_big_nohaplotig	CDS	36235297	36236633	.	+	0	Parent=FBgn0011274.1.mrna1;Target=FBgn0011274.1 1108 2445 +
ChrX	stalkie_big_nohaplotig	mRNA	36225959	36245536	.	+	.	ID=comp158630_c0_seq1.mrna1;geneID=comp158630_c0_seq1.path1;Name=comp158630_c0_seq1;Dir=antisensecoverage=84.9;identity=99.9;matches=4665;mismatches=3;indels=3;unknowns=0;locus=RLOC_00002154
ChrX	stalkie_big_nohaplotig	exon	36225959	36226012	100	+	.	Parent=comp158630_c0_seq1.mrna1;Target=comp158630_c0_seq1 4618 4671 -
ChrX	stalkie_big_nohaplotig	exon	36234211	36234780	100	+	.	Parent=comp158630_c0_seq1.mrna1;Target=comp158630_c0_seq1 4048 4617 -
ChrX	stalkie_big_nohaplotig	exon	36234841	36235238	100	+	.	Parent=comp158630_c0_seq1.mrna1;Target=comp158630_c0_seq1 3650 4047 -
ChrX	stalkie_big_nohaplotig	exon	36235297	36237727	99	+	.	Parent=comp158630_c0_seq1.mrna1;Target=comp158630_c0_seq1 1218 3649 -
ChrX	stalkie_big_nohaplotig	exon	36239913	36239915	100	+	.	Parent=comp158630_c0_seq1.mrna1;Target=comp158630_c0_seq1 1215 1217 -
ChrX	stalkie_big_nohaplotig	exon	36244128	36244187	100	+	.	Parent=comp158630_c0_seq1.mrna1;Target=comp158630_c0_seq1 1155 1214 -
ChrX	stalkie_big_nohaplotig	exon	36244385	36245536	99	+	.	Parent=comp158630_c0_seq1.mrna1;Target=comp158630_c0_seq1 1 1154 -
ChrX	stalkie_big_nohaplotig	CDS	36225961	36226012	.	+	0	Parent=comp158630_c0_seq1.mrna1;Target=comp158630_c0_seq1 4618 4669 .
ChrX	stalkie_big_nohaplotig	CDS	36234211	36234780	.	+	2	Parent=comp158630_c0_seq1.mrna1;Target=comp158630_c0_seq1 4048 4617 .
ChrX	stalkie_big_nohaplotig	CDS	36234841	36235238	.	+	2	Parent=comp158630_c0_seq1.mrna1;Target=comp158630_c0_seq1 3650 4047 .
ChrX	stalkie_big_nohaplotig	CDS	36235297	36236636	.	+	0	Parent=comp158630_c0_seq1.mrna1;Target=comp158630_c0_seq1 2309 3649 .
ChrX	gffcl	locus	36204846	36205845	.	-	.	ID=RLOC_00002155;geneIDs=comp148764_c0_seq1.path1;transcripts=comp148764_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36204846	36205845	.	-	.	ID=comp148764_c0_seq1.mrna1;geneID=comp148764_c0_seq1.path1;Name=comp148764_c0_seq1;Dir=antisensecoverage=97.1;identity=94.0;matches=798;mismatches=6;indels=45;unknowns=0;Target=comp148764_c0_seq1 523 810 .;locus=RLOC_00002155
ChrX	stalkie_big_nohaplotig	exon	36204846	36204969	100	-	.	Parent=comp148764_c0_seq1.mrna1;Target=comp148764_c0_seq1 6 129 -
ChrX	stalkie_big_nohaplotig	exon	36205030	36205127	100	-	.	Parent=comp148764_c0_seq1.mrna1;Target=comp148764_c0_seq1 130 227 -
ChrX	stalkie_big_nohaplotig	exon	36205220	36205845	91	-	.	Parent=comp148764_c0_seq1.mrna1;Target=comp148764_c0_seq1 228 810 -
ChrX	stalkie_big_nohaplotig	CDS	36205559	36205845	.	-	0	Parent=comp148764_c0_seq1.mrna1
ChrX	gffcl	locus	36269076	36273267	.	-	.	ID=RLOC_00002156;geneIDs=FBgn0032635.1.path1;transcripts=FBgn0032635.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36269076	36273267	.	-	.	ID=FBgn0032635.1.mrna1;geneID=FBgn0032635.1.path1;Name=FBgn0032635.1;Dir=sensecoverage=100.0;identity=98.7;matches=1525;mismatches=8;indels=12;unknowns=0;locus=RLOC_00002156
ChrX	stalkie_big_nohaplotig	exon	36269076	36269452	100	-	.	Parent=FBgn0032635.1.mrna1;Target=FBgn0032635.1 1163 1539 +
ChrX	stalkie_big_nohaplotig	exon	36272106	36273267	98	-	.	Parent=FBgn0032635.1.mrna1;Target=FBgn0032635.1 1 1162 +
ChrX	stalkie_big_nohaplotig	CDS	36269076	36269452	.	-	2	Parent=FBgn0032635.1.mrna1;Target=FBgn0032635.1 1163 1539 +
ChrX	stalkie_big_nohaplotig	CDS	36272106	36273267	.	-	0	Parent=FBgn0032635.1.mrna1;Target=FBgn0032635.1 1 1162 +
ChrX	gffcl	locus	36269607	36270528	.	+	.	ID=RLOC_00002157;geneIDs=FBgn0051803.1.path1;transcripts=FBgn0051803.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36269607	36270528	.	+	.	ID=FBgn0051803.1.mrna1;geneID=FBgn0051803.1.path1;Name=FBgn0051803.1;Dir=sensecoverage=100.0;identity=100.0;matches=858;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002157
ChrX	stalkie_big_nohaplotig	exon	36269607	36269969	100	+	.	Parent=FBgn0051803.1.mrna1;Target=FBgn0051803.1 1 363 +
ChrX	stalkie_big_nohaplotig	exon	36270034	36270528	100	+	.	Parent=FBgn0051803.1.mrna1;Target=FBgn0051803.1 364 858 +
ChrX	stalkie_big_nohaplotig	CDS	36269607	36269969	.	+	0	Parent=FBgn0051803.1.mrna1;Target=FBgn0051803.1 1 363 +
ChrX	stalkie_big_nohaplotig	CDS	36270034	36270528	.	+	0	Parent=FBgn0051803.1.mrna1;Target=FBgn0051803.1 364 858 +
ChrX	gffcl	locus	36278967	36285812	.	-	.	ID=RLOC_00002158;geneIDs=comp163486_c0_seq1.path1;transcripts=comp163486_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36278967	36285812	.	-	.	ID=comp163486_c0_seq1.mrna1;geneID=comp163486_c0_seq1.path1;Name=comp163486_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=2275;mismatches=7;indels=1;unknowns=0;locus=RLOC_00002158
ChrX	stalkie_big_nohaplotig	exon	36278967	36279359	99	-	.	Parent=comp163486_c0_seq1.mrna1;Target=comp163486_c0_seq1 1 392 -
ChrX	stalkie_big_nohaplotig	exon	36280766	36280980	100	-	.	Parent=comp163486_c0_seq1.mrna1;Target=comp163486_c0_seq1 393 607 -
ChrX	stalkie_big_nohaplotig	exon	36284067	36284197	99	-	.	Parent=comp163486_c0_seq1.mrna1;Target=comp163486_c0_seq1 608 738 -
ChrX	stalkie_big_nohaplotig	exon	36284269	36285812	99	-	.	Parent=comp163486_c0_seq1.mrna1;Target=comp163486_c0_seq1 739 2282 -
ChrX	stalkie_big_nohaplotig	CDS	36279313	36279359	.	-	2	Parent=comp163486_c0_seq1.mrna1;Target=comp163486_c0_seq1 346 392 .
ChrX	stalkie_big_nohaplotig	CDS	36280766	36280980	.	-	1	Parent=comp163486_c0_seq1.mrna1;Target=comp163486_c0_seq1 393 607 .
ChrX	stalkie_big_nohaplotig	CDS	36284067	36284197	.	-	0	Parent=comp163486_c0_seq1.mrna1;Target=comp163486_c0_seq1 608 738 .
ChrX	stalkie_big_nohaplotig	CDS	36284269	36285810	.	-	0	Parent=comp163486_c0_seq1.mrna1;Target=comp163486_c0_seq1 739 2280 .
ChrX	gffcl	locus	36294931	36306809	.	-	.	ID=RLOC_00002159;geneIDs=FBgn0020503.1.path1;transcripts=FBgn0020503.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36294931	36306809	.	-	.	ID=FBgn0020503.1.mrna1;geneID=FBgn0020503.1.path1;Name=FBgn0020503.1;Dir=sensecoverage=85.2;identity=99.9;matches=1024;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002159
ChrX	stalkie_big_nohaplotig	exon	36294931	36295080	100	-	.	Parent=FBgn0020503.1.mrna1;Target=FBgn0020503.1 1054 1203 +
ChrX	stalkie_big_nohaplotig	exon	36301226	36301336	100	-	.	Parent=FBgn0020503.1.mrna1;Target=FBgn0020503.1 943 1053 +
ChrX	stalkie_big_nohaplotig	exon	36305502	36305558	100	-	.	Parent=FBgn0020503.1.mrna1;Target=FBgn0020503.1 886 942 +
ChrX	stalkie_big_nohaplotig	exon	36305828	36306005	100	-	.	Parent=FBgn0020503.1.mrna1;Target=FBgn0020503.1 708 885 +
ChrX	stalkie_big_nohaplotig	exon	36306090	36306255	100	-	.	Parent=FBgn0020503.1.mrna1;Target=FBgn0020503.1 542 707 +
ChrX	stalkie_big_nohaplotig	exon	36306351	36306560	100	-	.	Parent=FBgn0020503.1.mrna1;Target=FBgn0020503.1 332 541 +
ChrX	stalkie_big_nohaplotig	exon	36306657	36306809	99	-	.	Parent=FBgn0020503.1.mrna1;Target=FBgn0020503.1 179 331 +
ChrX	stalkie_big_nohaplotig	CDS	36294931	36295080	.	-	0	Parent=FBgn0020503.1.mrna1;Target=FBgn0020503.1 1054 1203 +
ChrX	stalkie_big_nohaplotig	CDS	36301226	36301336	.	-	0	Parent=FBgn0020503.1.mrna1;Target=FBgn0020503.1 943 1053 +
ChrX	stalkie_big_nohaplotig	CDS	36305502	36305558	.	-	0	Parent=FBgn0020503.1.mrna1;Target=FBgn0020503.1 886 942 +
ChrX	stalkie_big_nohaplotig	CDS	36305828	36306005	.	-	1	Parent=FBgn0020503.1.mrna1;Target=FBgn0020503.1 708 885 +
ChrX	stalkie_big_nohaplotig	CDS	36306090	36306255	.	-	2	Parent=FBgn0020503.1.mrna1;Target=FBgn0020503.1 542 707 +
ChrX	stalkie_big_nohaplotig	CDS	36306351	36306560	.	-	2	Parent=FBgn0020503.1.mrna1;Target=FBgn0020503.1 332 541 +
ChrX	stalkie_big_nohaplotig	CDS	36306657	36306807	.	-	0	Parent=FBgn0020503.1.mrna1;Target=FBgn0020503.1 181 331 +
ChrX	gffcl	locus	36295211	36295945	.	+	.	ID=RLOC_00002160;geneIDs=comp148561_c0_seq1.path1;transcripts=comp148561_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36295211	36295945	.	+	.	ID=comp148561_c0_seq1.mrna1;geneID=comp148561_c0_seq1.path1;Name=comp148561_c0_seq1;Dir=indeterminatecoverage=98.1;identity=99.9;matches=734;mismatches=1;indels=0;unknowns=0;Target=comp148561_c0_seq1 735 1 .;CDS_Target=comp148561_c0_seq1 506 405 .;locus=RLOC_00002160
ChrX	stalkie_big_nohaplotig	exon	36295211	36295945	99	+	.	Parent=comp148561_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36295615	36295716	.	+	0	Parent=comp148561_c0_seq1.mrna1
ChrX	gffcl	locus	36339265	36416244	.	-	.	ID=RLOC_00002161;geneIDs=Dv_FBgn0203373.path1,comp156355_c0_seq1.path1;transcripts=comp156355_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36339265	36416244	.	-	.	ID=comp156355_c0_seq1.mrna1;geneID=comp156355_c0_seq1.path1;Name=comp156355_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=1123;mismatches=11;indels=1;unknowns=0;locus=RLOC_00002161
ChrX	stalkie_big_nohaplotig	exon	36339265	36339310	97	-	.	Parent=comp156355_c0_seq1.mrna1;Target=comp156355_c0_seq1 1 46 -
ChrX	stalkie_big_nohaplotig	exon	36414718	36415093	99	-	.	Parent=comp156355_c0_seq1.mrna1;Target=comp156355_c0_seq1 47 422 -
ChrX	stalkie_big_nohaplotig	exon	36415533	36416244	98	-	.	Parent=comp156355_c0_seq1.mrna1;Target=comp156355_c0_seq1 423 1135 -
ChrX	stalkie_big_nohaplotig	CDS	36339267	36339310	.	-	2	Parent=comp156355_c0_seq1.mrna1;Target=comp156355_c0_seq1 3 46 .
ChrX	stalkie_big_nohaplotig	CDS	36414718	36414970	.	-	0	Parent=comp156355_c0_seq1.mrna1;Target=comp156355_c0_seq1 47 299 .
ChrX	stalkie_big_nohaplotig	mRNA	36433647	38217546	.	+	.	ID=comp148626_c0_seq1.mrna1;geneID=comp148626_c0_seq1.path1;Name=comp148626_c0_seq1;Dir=indeterminatecoverage=95.0;identity=92.9;matches=758;mismatches=23;indels=35;unknowns=0;Target=comp148626_c0_seq1 438 1 .;locus=RLOC_00002162
ChrX	stalkie_big_nohaplotig	exon	36433647	36434161	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 515 1 .
ChrX	stalkie_big_nohaplotig	exon	38103612	38103615	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 519 516 .
ChrX	stalkie_big_nohaplotig	exon	38108171	38108180	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 529 520 .
ChrX	stalkie_big_nohaplotig	exon	38110858	38110865	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 537 530 .
ChrX	stalkie_big_nohaplotig	exon	38113837	38113839	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 540 538 .
ChrX	stalkie_big_nohaplotig	exon	38120100	38120108	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 549 541 .
ChrX	stalkie_big_nohaplotig	exon	38122870	38122876	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 556 550 .
ChrX	stalkie_big_nohaplotig	exon	38128446	38128488	65	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 595 557 .
ChrX	stalkie_big_nohaplotig	exon	38128766	38128774	77	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 604 596 .
ChrX	stalkie_big_nohaplotig	exon	38134806	38134813	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 612 605 .
ChrX	stalkie_big_nohaplotig	exon	38139906	38139907	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 614 613 .
ChrX	stalkie_big_nohaplotig	exon	38146595	38146599	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 619 615 .
ChrX	stalkie_big_nohaplotig	exon	38154492	38154494	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 622 620 .
ChrX	stalkie_big_nohaplotig	exon	38156432	38156441	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 632 623 .
ChrX	stalkie_big_nohaplotig	exon	38159465	38159483	34	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 667 633 .
ChrX	stalkie_big_nohaplotig	exon	38166511	38166521	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 678 668 .
ChrX	stalkie_big_nohaplotig	exon	38170310	38170312	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 681 679 .
ChrX	stalkie_big_nohaplotig	exon	38172083	38172089	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 688 682 .
ChrX	stalkie_big_nohaplotig	exon	38172463	38172471	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 697 689 .
ChrX	stalkie_big_nohaplotig	exon	38175893	38175894	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 699 698 .
ChrX	stalkie_big_nohaplotig	exon	38183970	38183973	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 703 700 .
ChrX	stalkie_big_nohaplotig	exon	38184954	38184966	23	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 707 704 .
ChrX	stalkie_big_nohaplotig	exon	38185615	38185623	88	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 716 708 .
ChrX	stalkie_big_nohaplotig	exon	38189565	38189566	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 718 717 .
ChrX	stalkie_big_nohaplotig	exon	38196042	38196052	81	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 729 719 .
ChrX	stalkie_big_nohaplotig	exon	38201676	38201682	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 736 730 .
ChrX	stalkie_big_nohaplotig	exon	38202372	38202375	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 740 737 .
ChrX	stalkie_big_nohaplotig	exon	38206353	38206359	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 747 741 .
ChrX	stalkie_big_nohaplotig	exon	38213404	38213414	81	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 758 748 .
ChrX	stalkie_big_nohaplotig	exon	38216183	38216191	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 767 759 .
ChrX	stalkie_big_nohaplotig	exon	38216773	38216785	84	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 780 768 .
ChrX	stalkie_big_nohaplotig	exon	38217527	38217546	100	+	.	Parent=comp148626_c0_seq1.mrna1;Target=comp148626_c0_seq1 800 781 .
ChrX	stalkie_big_nohaplotig	CDS	36433647	36434084	.	+	0	Parent=comp148626_c0_seq1.mrna1
ChrX	gffcl	locus	36435115	36435353	.	-	.	ID=RLOC_00002163;geneIDs=comp117690_c0_seq1.path1;transcripts=comp117690_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36435115	36435353	.	-	.	ID=comp117690_c0_seq1.mrna1;geneID=comp117690_c0_seq1.path1;Name=comp117690_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=239;mismatches=0;indels=1;unknowns=0;Target=comp117690_c0_seq1 240 1 .;CDS_Target=comp117690_c0_seq1 136 2 .;locus=RLOC_00002163
ChrX	stalkie_big_nohaplotig	exon	36435115	36435353	99	-	.	Parent=comp117690_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36435218	36435352	.	-	0	Parent=comp117690_c0_seq1.mrna1
ChrX	gffcl	locus	36435588	36436178	.	-	.	ID=RLOC_00002164;geneIDs=comp149441_c0_seq1.path1;transcripts=comp149441_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36435588	36436178	.	-	.	ID=comp149441_c0_seq1.mrna1;geneID=comp149441_c0_seq1.path1;Name=comp149441_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=590;mismatches=1;indels=2;unknowns=0;Target=comp149441_c0_seq1 593 1 .;CDS_Target=comp149441_c0_seq1 294 46 .;locus=RLOC_00002164
ChrX	stalkie_big_nohaplotig	exon	36435588	36436178	99	-	.	Parent=comp149441_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36435885	36436133	.	-	0	Parent=comp149441_c0_seq1.mrna1
ChrX	gffcl	locus	36439006	36442717	.	-	.	ID=RLOC_00002165;geneIDs=FBgn0032339.1.path1;transcripts=FBgn0032339.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36439006	36442717	.	-	.	ID=FBgn0032339.1.mrna1;geneID=FBgn0032339.1.path1;Name=FBgn0032339.1;Dir=sensecoverage=100.0;identity=99.8;matches=2940;mismatches=6;indels=0;unknowns=0;locus=RLOC_00002165
ChrX	stalkie_big_nohaplotig	exon	36439006	36439080	100	-	.	Parent=FBgn0032339.1.mrna1;Target=FBgn0032339.1 2872 2946 +
ChrX	stalkie_big_nohaplotig	exon	36439146	36439367	100	-	.	Parent=FBgn0032339.1.mrna1;Target=FBgn0032339.1 2650 2871 +
ChrX	stalkie_big_nohaplotig	exon	36439436	36440479	99	-	.	Parent=FBgn0032339.1.mrna1;Target=FBgn0032339.1 1606 2649 +
ChrX	stalkie_big_nohaplotig	exon	36440665	36440856	100	-	.	Parent=FBgn0032339.1.mrna1;Target=FBgn0032339.1 1414 1605 +
ChrX	stalkie_big_nohaplotig	exon	36441002	36441442	99	-	.	Parent=FBgn0032339.1.mrna1;Target=FBgn0032339.1 973 1413 +
ChrX	stalkie_big_nohaplotig	exon	36441504	36441677	100	-	.	Parent=FBgn0032339.1.mrna1;Target=FBgn0032339.1 799 972 +
ChrX	stalkie_big_nohaplotig	exon	36441737	36441887	100	-	.	Parent=FBgn0032339.1.mrna1;Target=FBgn0032339.1 648 798 +
ChrX	stalkie_big_nohaplotig	exon	36441945	36442077	100	-	.	Parent=FBgn0032339.1.mrna1;Target=FBgn0032339.1 515 647 +
ChrX	stalkie_big_nohaplotig	exon	36442146	36442356	99	-	.	Parent=FBgn0032339.1.mrna1;Target=FBgn0032339.1 304 514 +
ChrX	stalkie_big_nohaplotig	exon	36442415	36442717	100	-	.	Parent=FBgn0032339.1.mrna1;Target=FBgn0032339.1 1 303 +
ChrX	stalkie_big_nohaplotig	CDS	36439006	36439080	.	-	0	Parent=FBgn0032339.1.mrna1;Target=FBgn0032339.1 2872 2946 +
ChrX	stalkie_big_nohaplotig	CDS	36439146	36439367	.	-	0	Parent=FBgn0032339.1.mrna1;Target=FBgn0032339.1 2650 2871 +
ChrX	stalkie_big_nohaplotig	CDS	36439436	36440479	.	-	0	Parent=FBgn0032339.1.mrna1;Target=FBgn0032339.1 1606 2649 +
ChrX	stalkie_big_nohaplotig	CDS	36440665	36440856	.	-	0	Parent=FBgn0032339.1.mrna1;Target=FBgn0032339.1 1414 1605 +
ChrX	stalkie_big_nohaplotig	CDS	36441002	36441442	.	-	0	Parent=FBgn0032339.1.mrna1;Target=FBgn0032339.1 973 1413 +
ChrX	stalkie_big_nohaplotig	CDS	36441504	36441677	.	-	0	Parent=FBgn0032339.1.mrna1;Target=FBgn0032339.1 799 972 +
ChrX	stalkie_big_nohaplotig	CDS	36441737	36441887	.	-	1	Parent=FBgn0032339.1.mrna1;Target=FBgn0032339.1 648 798 +
ChrX	stalkie_big_nohaplotig	CDS	36441945	36442077	.	-	2	Parent=FBgn0032339.1.mrna1;Target=FBgn0032339.1 515 647 +
ChrX	stalkie_big_nohaplotig	CDS	36442146	36442356	.	-	0	Parent=FBgn0032339.1.mrna1;Target=FBgn0032339.1 304 514 +
ChrX	stalkie_big_nohaplotig	CDS	36442415	36442717	.	-	0	Parent=FBgn0032339.1.mrna1;Target=FBgn0032339.1 1 303 +
ChrX	gffcl	locus	36444858	36445442	.	+	.	ID=RLOC_00002166;geneIDs=comp151900_c0_seq1.path1;transcripts=comp151900_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36444858	36445442	.	+	.	ID=comp151900_c0_seq1.mrna1;geneID=comp151900_c0_seq1.path1;Name=comp151900_c0_seq1;Dir=indeterminatecoverage=90.1;identity=81.7;matches=577;mismatches=3;indels=126;unknowns=0;Target=comp151900_c0_seq1 701 1 .;CDS_Target=comp151900_c0_seq1 432 373 .;locus=RLOC_00002166
ChrX	stalkie_big_nohaplotig	exon	36444858	36445442	81	+	.	Parent=comp151900_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36445114	36445173	.	+	0	Parent=comp151900_c0_seq1.mrna1
ChrX	gffcl	locus	36445502	36445814	.	-	.	ID=RLOC_00002167;geneIDs=comp145496_c0_seq1.path1;transcripts=comp145496_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36445502	36445814	.	-	.	ID=comp145496_c0_seq1.mrna1;geneID=comp145496_c0_seq1.path1;Name=comp145496_c0_seq1;Dir=indeterminatecoverage=99.1;identity=100.0;matches=313;mismatches=0;indels=0;unknowns=0;Target=comp145496_c0_seq1 316 4 .;CDS_Target=comp145496_c0_seq1 106 5 .;locus=RLOC_00002167
ChrX	stalkie_big_nohaplotig	exon	36445502	36445814	100	-	.	Parent=comp145496_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36445712	36445813	.	-	0	Parent=comp145496_c0_seq1.mrna1
ChrX	gffcl	locus	36446466	36446997	.	-	.	ID=RLOC_00002168;geneIDs=comp136931_c0_seq1.path1;transcripts=comp136931_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36446466	36446997	.	-	.	ID=comp136931_c0_seq1.mrna1;geneID=comp136931_c0_seq1.path1;Name=comp136931_c0_seq1;Dir=indeterminatecoverage=98.7;identity=100.0;matches=532;mismatches=0;indels=0;unknowns=0;Target=comp136931_c0_seq1 539 8 .;CDS_Target=comp136931_c0_seq1 416 279 .;locus=RLOC_00002168
ChrX	stalkie_big_nohaplotig	exon	36446466	36446997	100	-	.	Parent=comp136931_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36446589	36446726	.	-	0	Parent=comp136931_c0_seq1.mrna1
ChrX	gffcl	locus	36447459	36448037	.	+	.	ID=RLOC_00002169;geneIDs=comp150716_c1_seq1.path1;transcripts=comp150716_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36447459	36448037	.	+	.	ID=comp150716_c1_seq1.mrna1;geneID=comp150716_c1_seq1.path1;Name=comp150716_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=579;mismatches=0;indels=0;unknowns=0;Target=comp150716_c1_seq1 579 1 .;CDS_Target=comp150716_c1_seq1 241 77 .;locus=RLOC_00002169
ChrX	stalkie_big_nohaplotig	exon	36447459	36448037	100	+	.	Parent=comp150716_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36447535	36447699	.	+	0	Parent=comp150716_c1_seq1.mrna1
ChrX	gffcl	locus	36448651	36459527	.	-	.	ID=RLOC_00002170;geneIDs=FBgn0032338.1.path1;transcripts=FBgn0032338.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36448651	36459527	.	-	.	ID=FBgn0032338.1.mrna1;geneID=FBgn0032338.1.path1;Name=FBgn0032338.1;Dir=sensecoverage=100.0;identity=97.6;matches=2218;mismatches=5;indels=49;unknowns=0;Target=FBgn0032338.1 160 2223 +;locus=RLOC_00002170
ChrX	stalkie_big_nohaplotig	exon	36448651	36450742	99	-	.	Parent=FBgn0032338.1.mrna1;Target=FBgn0032338.1 132 2223 +
ChrX	stalkie_big_nohaplotig	exon	36459348	36459527	72	-	.	Parent=FBgn0032338.1.mrna1;Target=FBgn0032338.1 1 131 +
ChrX	stalkie_big_nohaplotig	CDS	36448651	36450714	.	-	0	Parent=FBgn0032338.1.mrna1
ChrX	gffcl	locus	36452677	36455525	.	-	.	ID=RLOC_00002171;geneIDs=FBgn0002413.6.path1;transcripts=FBgn0002413.6.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36452677	36455525	.	-	.	ID=FBgn0002413.6.mrna1;geneID=FBgn0002413.6.path1;Name=FBgn0002413.6;Dir=indeterminatecoverage=100.0;identity=99.8;matches=2843;mismatches=6;indels=1;unknowns=0;Target=FBgn0002413.6 2850 1 .;locus=RLOC_00002171
ChrX	stalkie_big_nohaplotig	exon	36452677	36455525	99	-	.	Parent=FBgn0002413.6.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36452677	36455525	.	-	0	Parent=FBgn0002413.6.mrna1
ChrX	gffcl	locus	36466267	36467641	.	+	.	ID=RLOC_00002172;geneIDs=comp126743_c0_seq1.path1,comp147909_c0_seq1.path1;transcripts=comp126743_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36466267	36467295	.	+	.	ID=comp126743_c0_seq1.mrna1;geneID=comp126743_c0_seq1.path1;Name=comp126743_c0_seq1;Dir=sensecoverage=98.0;identity=100.0;matches=750;mismatches=0;indels=0;unknowns=0;Target=comp126743_c0_seq1 13 444 +;locus=RLOC_00002172
ChrX	stalkie_big_nohaplotig	exon	36466267	36466702	100	+	.	Parent=comp126743_c0_seq1.mrna1;Target=comp126743_c0_seq1 13 448 +
ChrX	stalkie_big_nohaplotig	exon	36466797	36466882	100	+	.	Parent=comp126743_c0_seq1.mrna1;Target=comp126743_c0_seq1 449 534 +
ChrX	stalkie_big_nohaplotig	exon	36466950	36467037	100	+	.	Parent=comp126743_c0_seq1.mrna1;Target=comp126743_c0_seq1 535 622 +
ChrX	stalkie_big_nohaplotig	exon	36467156	36467295	100	+	.	Parent=comp126743_c0_seq1.mrna1;Target=comp126743_c0_seq1 623 762 +
ChrX	stalkie_big_nohaplotig	CDS	36466267	36466698	.	+	0	Parent=comp126743_c0_seq1.mrna1
ChrX	gffcl	locus	36534315	36534519	.	+	.	ID=RLOC_00002174;geneIDs=comp520609_c0_seq1.path1;transcripts=comp520609_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36534315	36534519	.	+	.	ID=comp520609_c0_seq1.mrna1;geneID=comp520609_c0_seq1.path1;Name=comp520609_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=205;mismatches=0;indels=0;unknowns=0;Target=comp520609_c0_seq1 205 1 .;CDS_Target=comp520609_c0_seq1 56 3 .;locus=RLOC_00002174
ChrX	stalkie_big_nohaplotig	exon	36534315	36534519	100	+	.	Parent=comp520609_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36534317	36534370	.	+	0	Parent=comp520609_c0_seq1.mrna1
ChrX	gffcl	locus	36537501	36538339	.	+	.	ID=RLOC_00002175;geneIDs=comp151104_c0_seq1.path1;transcripts=comp151104_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36537501	36538339	.	+	.	ID=comp151104_c0_seq1.mrna1;geneID=comp151104_c0_seq1.path1;Name=comp151104_c0_seq1;Dir=antisensecoverage=98.0;identity=99.9;matches=783;mismatches=1;indels=0;unknowns=0;Target=comp151104_c0_seq1 269 574 .;locus=RLOC_00002175
ChrX	stalkie_big_nohaplotig	exon	36537501	36537690	100	+	.	Parent=comp151104_c0_seq1.mrna1;Target=comp151104_c0_seq1 595 784 -
ChrX	stalkie_big_nohaplotig	exon	36537746	36538339	99	+	.	Parent=comp151104_c0_seq1.mrna1;Target=comp151104_c0_seq1 1 594 -
ChrX	stalkie_big_nohaplotig	CDS	36537766	36538071	.	+	0	Parent=comp151104_c0_seq1.mrna1
ChrX	gffcl	locus	36542162	36542945	.	+	.	ID=RLOC_00002176;geneIDs=FBgn0262601.1.path1;transcripts=FBgn0262601.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36542162	36542945	.	+	.	ID=FBgn0262601.1.mrna1;geneID=FBgn0262601.1.path1;Name=FBgn0262601.1;Dir=sensecoverage=100.0;identity=99.4;matches=668;mismatches=3;indels=1;unknowns=0;locus=RLOC_00002176
ChrX	stalkie_big_nohaplotig	exon	36542162	36542280	96	+	.	Parent=FBgn0262601.1.mrna1;Target=FBgn0262601.1 1 120 +
ChrX	stalkie_big_nohaplotig	exon	36542394	36542945	100	+	.	Parent=FBgn0262601.1.mrna1;Target=FBgn0262601.1 121 672 +
ChrX	stalkie_big_nohaplotig	CDS	36542278	36542280	.	+	0	Parent=FBgn0262601.1.mrna1;Target=FBgn0262601.1 118 120 +
ChrX	stalkie_big_nohaplotig	CDS	36542394	36542945	.	+	0	Parent=FBgn0262601.1.mrna1;Target=FBgn0262601.1 121 672 +
ChrX	gffcl	locus	36544747	36545530	.	-	.	ID=RLOC_00002177;geneIDs=FBgn0262601.1.path2;transcripts=FBgn0262601.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	36544747	36545530	.	-	.	ID=FBgn0262601.1.mrna2;geneID=FBgn0262601.1.path2;Name=FBgn0262601.1;Dir=sensecoverage=100.0;identity=99.3;matches=667;mismatches=4;indels=1;unknowns=0;locus=RLOC_00002177
ChrX	stalkie_big_nohaplotig	exon	36544747	36545298	99	-	.	Parent=FBgn0262601.1.mrna2;Target=FBgn0262601.1 121 672 +
ChrX	stalkie_big_nohaplotig	exon	36545412	36545530	96	-	.	Parent=FBgn0262601.1.mrna2;Target=FBgn0262601.1 1 120 +
ChrX	stalkie_big_nohaplotig	CDS	36544747	36545298	.	-	0	Parent=FBgn0262601.1.mrna2;Target=FBgn0262601.1 121 672 +
ChrX	stalkie_big_nohaplotig	CDS	36545412	36545414	.	-	0	Parent=FBgn0262601.1.mrna2;Target=FBgn0262601.1 118 120 +
ChrX	gffcl	locus	36549119	36578904	.	-	.	ID=RLOC_00002178;geneIDs=FBgn0032769.2.path1;transcripts=FBgn0032769.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36549119	36578904	.	-	.	ID=FBgn0032769.2.mrna1;geneID=FBgn0032769.2.path1;Name=FBgn0032769.2;Dir=sensecoverage=100.0;identity=99.4;matches=990;mismatches=6;indels=0;unknowns=0;locus=RLOC_00002178
ChrX	stalkie_big_nohaplotig	exon	36549119	36549228	100	-	.	Parent=FBgn0032769.2.mrna1;Target=FBgn0032769.2 887 996 +
ChrX	stalkie_big_nohaplotig	exon	36549302	36549589	98	-	.	Parent=FBgn0032769.2.mrna1;Target=FBgn0032769.2 599 886 +
ChrX	stalkie_big_nohaplotig	exon	36549656	36550110	99	-	.	Parent=FBgn0032769.2.mrna1;Target=FBgn0032769.2 144 598 +
ChrX	stalkie_big_nohaplotig	exon	36578762	36578904	100	-	.	Parent=FBgn0032769.2.mrna1;Target=FBgn0032769.2 1 143 +
ChrX	stalkie_big_nohaplotig	CDS	36549119	36549228	.	-	2	Parent=FBgn0032769.2.mrna1;Target=FBgn0032769.2 887 996 +
ChrX	stalkie_big_nohaplotig	CDS	36549302	36549589	.	-	2	Parent=FBgn0032769.2.mrna1;Target=FBgn0032769.2 599 886 +
ChrX	stalkie_big_nohaplotig	CDS	36549656	36550110	.	-	1	Parent=FBgn0032769.2.mrna1;Target=FBgn0032769.2 144 598 +
ChrX	stalkie_big_nohaplotig	CDS	36578762	36578904	.	-	0	Parent=FBgn0032769.2.mrna1;Target=FBgn0032769.2 1 143 +
ChrX	gffcl	locus	36550759	36551485	.	+	.	ID=RLOC_00002179;geneIDs=comp135030_c0_seq1.path1;transcripts=comp135030_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36550759	36551485	.	+	.	ID=comp135030_c0_seq1.mrna1;geneID=comp135030_c0_seq1.path1;Name=comp135030_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=726;mismatches=1;indels=0;unknowns=0;Target=comp135030_c0_seq1 727 1 .;CDS_Target=comp135030_c0_seq1 119 3 .;locus=RLOC_00002179
ChrX	stalkie_big_nohaplotig	exon	36550759	36551485	99	+	.	Parent=comp135030_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36550761	36550877	.	+	0	Parent=comp135030_c0_seq1.mrna1
ChrX	gffcl	locus	36553235	36554350	.	+	.	ID=RLOC_00002180;geneIDs=ORF1397.path1;transcripts=ORF1397.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36553235	36554350	.	+	.	ID=ORF1397.mrna1;geneID=ORF1397.path1;Name=ORF1397;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1113;mismatches=3;indels=0;unknowns=0;Target=ORF1397 1116 1 .;locus=RLOC_00002180
ChrX	stalkie_big_nohaplotig	exon	36553235	36554350	99	+	.	Parent=ORF1397.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36553235	36554350	.	+	0	Parent=ORF1397.mrna1
ChrX	gffcl	locus	36605596	36606287	.	-	.	ID=RLOC_00002181;geneIDs=comp154154_c1_seq1.path1;transcripts=comp154154_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36605596	36606287	.	-	.	ID=comp154154_c1_seq1.mrna1;geneID=comp154154_c1_seq1.path1;Name=comp154154_c1_seq1;Dir=sensecoverage=85.3;identity=99.8;matches=618;mismatches=1;indels=0;unknowns=0;Target=comp154154_c1_seq1 61 411 +;locus=RLOC_00002181
ChrX	stalkie_big_nohaplotig	exon	36605596	36605797	100	-	.	Parent=comp154154_c1_seq1.mrna1;Target=comp154154_c1_seq1 437 638 +
ChrX	stalkie_big_nohaplotig	exon	36605871	36606287	99	-	.	Parent=comp154154_c1_seq1.mrna1;Target=comp154154_c1_seq1 20 436 +
ChrX	stalkie_big_nohaplotig	CDS	36605896	36606246	.	-	0	Parent=comp154154_c1_seq1.mrna1
ChrX	gffcl	locus	36608818	36609646	.	+	.	ID=RLOC_00002182;geneIDs=comp142203_c0_seq1.path1;transcripts=comp142203_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36608818	36609646	.	+	.	ID=comp142203_c0_seq1.mrna1;geneID=comp142203_c0_seq1.path1;Name=comp142203_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=441;mismatches=0;indels=0;unknowns=0;Target=comp142203_c0_seq1 290 439 .;locus=RLOC_00002182
ChrX	stalkie_big_nohaplotig	exon	36608818	36609079	100	+	.	Parent=comp142203_c0_seq1.mrna1;Target=comp142203_c0_seq1 180 441 -
ChrX	stalkie_big_nohaplotig	exon	36609468	36609646	100	+	.	Parent=comp142203_c0_seq1.mrna1;Target=comp142203_c0_seq1 1 179 -
ChrX	stalkie_big_nohaplotig	CDS	36608820	36608969	.	+	0	Parent=comp142203_c0_seq1.mrna1
ChrX	gffcl	locus	36691095	36692370	.	-	.	ID=RLOC_00002183;geneIDs=comp159487_c0_seq1.path1;transcripts=comp159487_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36691095	36692370	.	-	.	ID=comp159487_c0_seq1.mrna1;geneID=comp159487_c0_seq1.path1;Name=comp159487_c0_seq1;Dir=antisensecoverage=98.9;identity=98.9;matches=1150;mismatches=11;indels=2;unknowns=0;locus=RLOC_00002183
ChrX	stalkie_big_nohaplotig	exon	36691095	36691617	99	-	.	Parent=comp159487_c0_seq1.mrna1;Target=comp159487_c0_seq1 1 523 -
ChrX	stalkie_big_nohaplotig	exon	36691678	36692090	99	-	.	Parent=comp159487_c0_seq1.mrna1;Target=comp159487_c0_seq1 524 936 -
ChrX	stalkie_big_nohaplotig	exon	36692146	36692370	97	-	.	Parent=comp159487_c0_seq1.mrna1;Target=comp159487_c0_seq1 937 1163 -
ChrX	stalkie_big_nohaplotig	CDS	36691400	36691617	.	-	2	Parent=comp159487_c0_seq1.mrna1;Target=comp159487_c0_seq1 306 523 .
ChrX	stalkie_big_nohaplotig	CDS	36691678	36692090	.	-	1	Parent=comp159487_c0_seq1.mrna1;Target=comp159487_c0_seq1 524 936 .
ChrX	stalkie_big_nohaplotig	CDS	36692146	36692192	.	-	0	Parent=comp159487_c0_seq1.mrna1;Target=comp159487_c0_seq1 937 983 .
ChrX	gffcl	locus	36730303	36786328	.	+	.	ID=RLOC_00002184;geneIDs=FBgn0032330.1.path1;transcripts=FBgn0032330.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36730303	36786328	.	+	.	ID=FBgn0032330.1.mrna1;geneID=FBgn0032330.1.path1;Name=FBgn0032330.1;Dir=sensecoverage=100.0;identity=100.0;matches=2079;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002184
ChrX	stalkie_big_nohaplotig	exon	36730303	36730724	100	+	.	Parent=FBgn0032330.1.mrna1;Target=FBgn0032330.1 1 422 +
ChrX	stalkie_big_nohaplotig	exon	36741156	36741422	100	+	.	Parent=FBgn0032330.1.mrna1;Target=FBgn0032330.1 423 689 +
ChrX	stalkie_big_nohaplotig	exon	36741493	36741847	100	+	.	Parent=FBgn0032330.1.mrna1;Target=FBgn0032330.1 690 1044 +
ChrX	stalkie_big_nohaplotig	exon	36741953	36742630	100	+	.	Parent=FBgn0032330.1.mrna1;Target=FBgn0032330.1 1045 1722 +
ChrX	stalkie_big_nohaplotig	exon	36785972	36786328	100	+	.	Parent=FBgn0032330.1.mrna1;Target=FBgn0032330.1 1723 2079 +
ChrX	stalkie_big_nohaplotig	CDS	36730303	36730724	.	+	0	Parent=FBgn0032330.1.mrna1;Target=FBgn0032330.1 1 422 +
ChrX	stalkie_big_nohaplotig	CDS	36741156	36741422	.	+	1	Parent=FBgn0032330.1.mrna1;Target=FBgn0032330.1 423 689 +
ChrX	stalkie_big_nohaplotig	CDS	36741493	36741847	.	+	1	Parent=FBgn0032330.1.mrna1;Target=FBgn0032330.1 690 1044 +
ChrX	stalkie_big_nohaplotig	CDS	36741953	36742630	.	+	0	Parent=FBgn0032330.1.mrna1;Target=FBgn0032330.1 1045 1722 +
ChrX	stalkie_big_nohaplotig	CDS	36785972	36786328	.	+	0	Parent=FBgn0032330.1.mrna1;Target=FBgn0032330.1 1723 2079 +
ChrX	gffcl	locus	36786967	36787520	.	+	.	ID=RLOC_00002185;geneIDs=comp524274_c0_seq1.path1;transcripts=comp524274_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36786967	36787520	.	+	.	ID=comp524274_c0_seq1.mrna1;geneID=comp524274_c0_seq1.path1;Name=comp524274_c0_seq1;Dir=indeterminatecoverage=96.0;identity=100.0;matches=554;mismatches=0;indels=0;unknowns=0;Target=comp524274_c0_seq1 554 1 .;CDS_Target=comp524274_c0_seq1 349 239 .;locus=RLOC_00002185
ChrX	stalkie_big_nohaplotig	exon	36786967	36787520	100	+	.	Parent=comp524274_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36787205	36787315	.	+	0	Parent=comp524274_c0_seq1.mrna1
ChrX	gffcl	locus	36791578	36792633	.	+	.	ID=RLOC_00002186;geneIDs=comp154914_c0_seq1.path1;transcripts=comp154914_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36791578	36792633	.	+	.	ID=comp154914_c0_seq1.mrna1;geneID=comp154914_c0_seq1.path1;Name=comp154914_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.5;matches=1050;mismatches=6;indels=10;unknowns=0;Target=comp154914_c0_seq1 1066 1 .;CDS_Target=comp154914_c0_seq1 181 2 .;locus=RLOC_00002186
ChrX	stalkie_big_nohaplotig	exon	36791578	36792633	98	+	.	Parent=comp154914_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36791579	36791758	.	+	0	Parent=comp154914_c0_seq1.mrna1
ChrX	gffcl	locus	36806574	36810627	.	+	.	ID=RLOC_00002187;geneIDs=comp160336_c0_seq1.path1;transcripts=comp160336_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36806574	36810627	.	+	.	ID=comp160336_c0_seq1.mrna1;geneID=comp160336_c0_seq1.path1;Name=comp160336_c0_seq1;Dir=sensecoverage=99.5;identity=96.0;matches=1380;mismatches=25;indels=32;unknowns=0;Target=comp160336_c0_seq1 123 566 +;locus=RLOC_00002187
ChrX	stalkie_big_nohaplotig	exon	36806574	36807349	99	+	.	Parent=comp160336_c0_seq1.mrna1;Target=comp160336_c0_seq1 8 785 +
ChrX	stalkie_big_nohaplotig	exon	36808237	36808379	92	+	.	Parent=comp160336_c0_seq1.mrna1;Target=comp160336_c0_seq1 786 929 +
ChrX	stalkie_big_nohaplotig	exon	36809483	36809654	86	+	.	Parent=comp160336_c0_seq1.mrna1;Target=comp160336_c0_seq1 930 1123 +
ChrX	stalkie_big_nohaplotig	exon	36809985	36810029	97	+	.	Parent=comp160336_c0_seq1.mrna1;Target=comp160336_c0_seq1 1124 1168 +
ChrX	stalkie_big_nohaplotig	exon	36810359	36810627	94	+	.	Parent=comp160336_c0_seq1.mrna1;Target=comp160336_c0_seq1 1169 1444 +
ChrX	stalkie_big_nohaplotig	CDS	36806689	36807132	.	+	0	Parent=comp160336_c0_seq1.mrna1
ChrX	gffcl	locus	36807388	36808106	.	+	.	ID=RLOC_00002188;geneIDs=comp153369_c0_seq1.path1;transcripts=comp153369_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36807388	36808106	.	+	.	ID=comp153369_c0_seq1.mrna1;geneID=comp153369_c0_seq1.path1;Name=comp153369_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.0;matches=705;mismatches=14;indels=64;unknowns=0;Target=comp153369_c0_seq1 783 1 .;CDS_Target=comp153369_c0_seq1 670 602 .;locus=RLOC_00002188
ChrX	stalkie_big_nohaplotig	exon	36807388	36808106	90	+	.	Parent=comp153369_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36807963	36808031	.	+	0	Parent=comp153369_c0_seq1.mrna1
ChrX	gffcl	locus	36811157	36811793	.	-	.	ID=RLOC_00002189;geneIDs=comp155425_c0_seq1.path1;transcripts=comp155425_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36811157	36811793	.	-	.	ID=comp155425_c0_seq1.mrna1;geneID=comp155425_c0_seq1.path1;Name=comp155425_c0_seq1;Dir=indeterminatecoverage=95.7;identity=94.4;matches=611;mismatches=26;indels=10;unknowns=0;Target=comp155425_c0_seq1 676 30 .;CDS_Target=comp155425_c0_seq1 615 511 .;locus=RLOC_00002189
ChrX	stalkie_big_nohaplotig	exon	36811157	36811793	94	-	.	Parent=comp155425_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36811218	36811322	.	-	0	Parent=comp155425_c0_seq1.mrna1
ChrX	gffcl	locus	36811999	36813302	.	-	.	ID=RLOC_00002190;geneIDs=comp146525_c0_seq1.path1;transcripts=comp146525_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36811999	36813302	.	-	.	ID=comp146525_c0_seq1.mrna1;geneID=comp146525_c0_seq1.path1;Name=comp146525_c0_seq1;Dir=sensecoverage=99.0;identity=97.5;matches=1074;mismatches=25;indels=3;unknowns=0;Target=comp146525_c0_seq1 657 947 +;locus=RLOC_00002190
ChrX	stalkie_big_nohaplotig	exon	36811999	36812536	97	-	.	Parent=comp146525_c0_seq1.mrna1;Target=comp146525_c0_seq1 575 1112 +
ChrX	stalkie_big_nohaplotig	exon	36812597	36812797	98	-	.	Parent=comp146525_c0_seq1.mrna1;Target=comp146525_c0_seq1 373 574 +
ChrX	stalkie_big_nohaplotig	exon	36812874	36813068	98	-	.	Parent=comp146525_c0_seq1.mrna1;Target=comp146525_c0_seq1 178 372 +
ChrX	stalkie_big_nohaplotig	exon	36813137	36813302	94	-	.	Parent=comp146525_c0_seq1.mrna1;Target=comp146525_c0_seq1 12 177 +
ChrX	stalkie_big_nohaplotig	CDS	36812164	36812454	.	-	0	Parent=comp146525_c0_seq1.mrna1
ChrX	gffcl	locus	36814454	36816225	.	+	.	ID=RLOC_00002191;geneIDs=comp147183_c0_seq1.path1;transcripts=comp147183_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36814454	36816225	.	+	.	ID=comp147183_c0_seq1.mrna1;geneID=comp147183_c0_seq1.path1;Name=comp147183_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=1699;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002191
ChrX	stalkie_big_nohaplotig	exon	36814454	36815029	99	+	.	Parent=comp147183_c0_seq1.mrna1;Target=comp147183_c0_seq1 1 576 +
ChrX	stalkie_big_nohaplotig	exon	36815102	36816225	100	+	.	Parent=comp147183_c0_seq1.mrna1;Target=comp147183_c0_seq1 577 1700 +
ChrX	stalkie_big_nohaplotig	CDS	36814690	36815029	.	+	0	Parent=comp147183_c0_seq1.mrna1;Target=comp147183_c0_seq1 237 576 +
ChrX	stalkie_big_nohaplotig	CDS	36815102	36815373	.	+	2	Parent=comp147183_c0_seq1.mrna1;Target=comp147183_c0_seq1 577 848 +
ChrX	gffcl	locus	36820515	36821171	.	+	.	ID=RLOC_00002193;geneIDs=FBgn0250837.1.path1;transcripts=FBgn0250837.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36820515	36821171	.	+	.	ID=FBgn0250837.1.mrna1;geneID=FBgn0250837.1.path1;Name=FBgn0250837.1;Dir=sensecoverage=100.0;identity=98.8;matches=596;mismatches=7;indels=0;unknowns=0;locus=RLOC_00002193
ChrX	stalkie_big_nohaplotig	exon	36820515	36820611	98	+	.	Parent=FBgn0250837.1.mrna1;Target=FBgn0250837.1 1 97 +
ChrX	stalkie_big_nohaplotig	exon	36820666	36821171	98	+	.	Parent=FBgn0250837.1.mrna1;Target=FBgn0250837.1 98 603 +
ChrX	stalkie_big_nohaplotig	CDS	36820515	36820611	.	+	0	Parent=FBgn0250837.1.mrna1;Target=FBgn0250837.1 1 97 +
ChrX	stalkie_big_nohaplotig	CDS	36820666	36821171	.	+	2	Parent=FBgn0250837.1.mrna1;Target=FBgn0250837.1 98 603 +
ChrX	gffcl	locus	36825024	36825944	.	-	.	ID=RLOC_00002194;geneIDs=ORF2643.path1;transcripts=ORF2643.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36825024	36825944	.	-	.	ID=ORF2643.mrna1;geneID=ORF2643.path1;Name=ORF2643;Dir=sensecoverage=100.0;identity=99.0;matches=823;mismatches=8;indels=0;unknowns=0;locus=RLOC_00002194
ChrX	stalkie_big_nohaplotig	exon	36825024	36825245	98	-	.	Parent=ORF2643.mrna1;Target=ORF2643 610 831 +
ChrX	stalkie_big_nohaplotig	exon	36825336	36825944	99	-	.	Parent=ORF2643.mrna1;Target=ORF2643 1 609 +
ChrX	stalkie_big_nohaplotig	CDS	36825024	36825245	.	-	0	Parent=ORF2643.mrna1;Target=ORF2643 610 831 +
ChrX	stalkie_big_nohaplotig	CDS	36825336	36825944	.	-	0	Parent=ORF2643.mrna1;Target=ORF2643 1 609 +
ChrX	gffcl	locus	36826174	36827309	.	+	.	ID=RLOC_00002195;geneIDs=comp160255_c0_seq1.path1;transcripts=comp160255_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36826174	36827309	.	+	.	ID=comp160255_c0_seq1.mrna1;geneID=comp160255_c0_seq1.path1;Name=comp160255_c0_seq1;Dir=antisensecoverage=99.4;identity=96.5;matches=1060;mismatches=4;indels=34;unknowns=0;Target=comp160255_c0_seq1 421 600 .;locus=RLOC_00002195
ChrX	stalkie_big_nohaplotig	exon	36826174	36826395	86	+	.	Parent=comp160255_c0_seq1.mrna1;Target=comp160255_c0_seq1 843 1098 -
ChrX	stalkie_big_nohaplotig	exon	36826468	36827309	99	+	.	Parent=comp160255_c0_seq1.mrna1;Target=comp160255_c0_seq1 1 842 -
ChrX	stalkie_big_nohaplotig	CDS	36826710	36826889	.	+	0	Parent=comp160255_c0_seq1.mrna1
ChrX	gffcl	locus	36827541	36828425	.	-	.	ID=RLOC_00002196;geneIDs=FBgn0032260.1.path1;transcripts=FBgn0032260.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36827541	36828425	.	-	.	ID=FBgn0032260.1.mrna1;geneID=FBgn0032260.1.path1;Name=FBgn0032260.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=885;mismatches=0;indels=0;unknowns=0;Target=FBgn0032260.1 885 1 .;locus=RLOC_00002196
ChrX	stalkie_big_nohaplotig	exon	36827541	36828425	100	-	.	Parent=FBgn0032260.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36827541	36828425	.	-	0	Parent=FBgn0032260.1.mrna1
ChrX	gffcl	locus	36828924	36829947	.	-	.	ID=RLOC_00002197;geneIDs=comp150971_c0_seq1.path1;transcripts=comp150971_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36828924	36829947	.	-	.	ID=comp150971_c0_seq1.mrna1;geneID=comp150971_c0_seq1.path1;Name=comp150971_c0_seq1;Dir=indeterminatecoverage=99.1;identity=93.5;matches=962;mismatches=34;indels=33;unknowns=0;Target=comp150971_c0_seq1 1010 10 .;CDS_Target=comp150971_c0_seq1 665 483 .;locus=RLOC_00002197
ChrX	stalkie_big_nohaplotig	exon	36828924	36829947	93	-	.	Parent=comp150971_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36829270	36829448	.	-	0	Parent=comp150971_c0_seq1.mrna1
ChrX	gffcl	locus	36833369	36846667	.	-	.	ID=RLOC_00002198;geneIDs=FBgn0086347.1.path1;transcripts=FBgn0086347.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36833369	36846667	.	-	.	ID=FBgn0086347.1.mrna1;geneID=FBgn0086347.1.path1;Name=FBgn0086347.1;Dir=sensecoverage=96.6;identity=100.0;matches=2629;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002198
ChrX	stalkie_big_nohaplotig	exon	36833369	36833534	100	-	.	Parent=FBgn0086347.1.mrna1;Target=FBgn0086347.1 2556 2721 +
ChrX	stalkie_big_nohaplotig	exon	36838291	36838448	100	-	.	Parent=FBgn0086347.1.mrna1;Target=FBgn0086347.1 2398 2555 +
ChrX	stalkie_big_nohaplotig	exon	36838518	36839912	100	-	.	Parent=FBgn0086347.1.mrna1;Target=FBgn0086347.1 1003 2397 +
ChrX	stalkie_big_nohaplotig	exon	36839988	36840067	100	-	.	Parent=FBgn0086347.1.mrna1;Target=FBgn0086347.1 923 1002 +
ChrX	stalkie_big_nohaplotig	exon	36840126	36840509	100	-	.	Parent=FBgn0086347.1.mrna1;Target=FBgn0086347.1 539 922 +
ChrX	stalkie_big_nohaplotig	exon	36840578	36840803	100	-	.	Parent=FBgn0086347.1.mrna1;Target=FBgn0086347.1 313 538 +
ChrX	stalkie_big_nohaplotig	exon	36846448	36846667	100	-	.	Parent=FBgn0086347.1.mrna1;Target=FBgn0086347.1 93 312 +
ChrX	stalkie_big_nohaplotig	CDS	36833369	36833534	.	-	1	Parent=FBgn0086347.1.mrna1;Target=FBgn0086347.1 2556 2721 +
ChrX	stalkie_big_nohaplotig	CDS	36838291	36838448	.	-	0	Parent=FBgn0086347.1.mrna1;Target=FBgn0086347.1 2398 2555 +
ChrX	stalkie_big_nohaplotig	CDS	36838518	36839912	.	-	0	Parent=FBgn0086347.1.mrna1;Target=FBgn0086347.1 1003 2397 +
ChrX	stalkie_big_nohaplotig	CDS	36839988	36840067	.	-	2	Parent=FBgn0086347.1.mrna1;Target=FBgn0086347.1 923 1002 +
ChrX	stalkie_big_nohaplotig	CDS	36840126	36840509	.	-	2	Parent=FBgn0086347.1.mrna1;Target=FBgn0086347.1 539 922 +
ChrX	stalkie_big_nohaplotig	CDS	36840578	36840803	.	-	0	Parent=FBgn0086347.1.mrna1;Target=FBgn0086347.1 313 538 +
ChrX	stalkie_big_nohaplotig	CDS	36846448	36846666	.	-	0	Parent=FBgn0086347.1.mrna1;Target=FBgn0086347.1 94 312 +
ChrX	gffcl	locus	36833861	36836656	.	+	.	ID=RLOC_00002199;geneIDs=comp158615_c0_seq1.path1;transcripts=comp158615_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36833861	36836656	.	+	.	ID=comp158615_c0_seq1.mrna1;geneID=comp158615_c0_seq1.path1;Name=comp158615_c0_seq1;Dir=sensecoverage=99.1;identity=99.8;matches=2296;mismatches=4;indels=0;unknowns=0;Target=comp158615_c0_seq1 10 609 +;locus=RLOC_00002199
ChrX	stalkie_big_nohaplotig	exon	36833861	36834697	99	+	.	Parent=comp158615_c0_seq1.mrna1;Target=comp158615_c0_seq1 9 845 +
ChrX	stalkie_big_nohaplotig	exon	36834950	36835421	100	+	.	Parent=comp158615_c0_seq1.mrna1;Target=comp158615_c0_seq1 846 1317 +
ChrX	stalkie_big_nohaplotig	exon	36835516	36835699	100	+	.	Parent=comp158615_c0_seq1.mrna1;Target=comp158615_c0_seq1 1318 1501 +
ChrX	stalkie_big_nohaplotig	exon	36835759	36836175	100	+	.	Parent=comp158615_c0_seq1.mrna1;Target=comp158615_c0_seq1 1502 1918 +
ChrX	stalkie_big_nohaplotig	exon	36836267	36836656	100	+	.	Parent=comp158615_c0_seq1.mrna1;Target=comp158615_c0_seq1 1919 2308 +
ChrX	stalkie_big_nohaplotig	CDS	36833862	36834461	.	+	0	Parent=comp158615_c0_seq1.mrna1
ChrX	gffcl	locus	36850684	36851488	.	+	.	ID=RLOC_00002200;geneIDs=comp152612_c3_seq1.path1;transcripts=comp152612_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36850684	36851488	.	+	.	ID=comp152612_c3_seq1.mrna1;geneID=comp152612_c3_seq1.path1;Name=comp152612_c3_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=631;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002200
ChrX	stalkie_big_nohaplotig	exon	36850684	36850828	100	+	.	Parent=comp152612_c3_seq1.mrna1;Target=comp152612_c3_seq1 1 145 +
ChrX	stalkie_big_nohaplotig	exon	36850888	36851106	99	+	.	Parent=comp152612_c3_seq1.mrna1;Target=comp152612_c3_seq1 146 364 +
ChrX	stalkie_big_nohaplotig	exon	36851169	36851294	100	+	.	Parent=comp152612_c3_seq1.mrna1;Target=comp152612_c3_seq1 365 490 +
ChrX	stalkie_big_nohaplotig	exon	36851347	36851488	100	+	.	Parent=comp152612_c3_seq1.mrna1;Target=comp152612_c3_seq1 491 632 +
ChrX	stalkie_big_nohaplotig	CDS	36850685	36850828	.	+	0	Parent=comp152612_c3_seq1.mrna1;Target=comp152612_c3_seq1 2 145 +
ChrX	stalkie_big_nohaplotig	CDS	36850888	36851106	.	+	0	Parent=comp152612_c3_seq1.mrna1;Target=comp152612_c3_seq1 146 364 +
ChrX	stalkie_big_nohaplotig	CDS	36851169	36851294	.	+	0	Parent=comp152612_c3_seq1.mrna1;Target=comp152612_c3_seq1 365 490 +
ChrX	stalkie_big_nohaplotig	CDS	36851347	36851373	.	+	0	Parent=comp152612_c3_seq1.mrna1;Target=comp152612_c3_seq1 491 517 +
ChrX	gffcl	locus	36887283	36888511	.	.	.	ID=RLOC_00002201;geneIDs=comp147327_c1_seq1.path1,comp149816_c0_seq1.path1;transcripts=comp147327_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36887283	36887970	.	-	.	ID=comp147327_c1_seq1.mrna1;geneID=comp147327_c1_seq1.path1;Name=comp147327_c1_seq1;Dir=indeterminatecoverage=99.1;identity=99.9;matches=687;mismatches=1;indels=0;unknowns=0;Target=comp147327_c1_seq1 694 7 .;CDS_Target=comp147327_c1_seq1 694 512 .;locus=RLOC_00002201
ChrX	stalkie_big_nohaplotig	exon	36887283	36887970	99	-	.	Parent=comp147327_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36887283	36887465	.	-	0	Parent=comp147327_c1_seq1.mrna1
ChrX	gffcl	locus	36903797	36906077	.	-	.	ID=RLOC_00002202;geneIDs=FBgn0031347.1.path1;transcripts=FBgn0031347.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36903797	36906077	.	-	.	ID=FBgn0031347.1.mrna1;geneID=FBgn0031347.1.path1;Name=FBgn0031347.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2202;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002202
ChrX	stalkie_big_nohaplotig	exon	36903797	36905751	99	-	.	Parent=FBgn0031347.1.mrna1;Target=FBgn0031347.1 2205 251 .
ChrX	stalkie_big_nohaplotig	exon	36905828	36906077	100	-	.	Parent=FBgn0031347.1.mrna1;Target=FBgn0031347.1 250 1 .
ChrX	stalkie_big_nohaplotig	CDS	36903797	36905751	.	-	2	Parent=FBgn0031347.1.mrna1;Target=FBgn0031347.1 2205 251 .
ChrX	stalkie_big_nohaplotig	CDS	36905828	36906077	.	-	0	Parent=FBgn0031347.1.mrna1;Target=FBgn0031347.1 250 1 .
ChrX	gffcl	locus	36906639	36909585	.	+	.	ID=RLOC_00002203;geneIDs=FBgn0031347.2.path1;transcripts=FBgn0031347.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36906639	36909585	.	+	.	ID=FBgn0031347.2.mrna1;geneID=FBgn0031347.2.path1;Name=FBgn0031347.2;Dir=sensecoverage=100.0;identity=99.8;matches=1788;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002203
ChrX	stalkie_big_nohaplotig	exon	36906639	36906873	100	+	.	Parent=FBgn0031347.2.mrna1;Target=FBgn0031347.2 1 235 +
ChrX	stalkie_big_nohaplotig	exon	36908030	36909585	99	+	.	Parent=FBgn0031347.2.mrna1;Target=FBgn0031347.2 236 1791 +
ChrX	stalkie_big_nohaplotig	CDS	36906639	36906873	.	+	0	Parent=FBgn0031347.2.mrna1;Target=FBgn0031347.2 1 235 +
ChrX	stalkie_big_nohaplotig	CDS	36908030	36909585	.	+	2	Parent=FBgn0031347.2.mrna1;Target=FBgn0031347.2 236 1791 +
ChrX	gffcl	locus	36912679	36913893	.	+	.	ID=RLOC_00002204;geneIDs=FBgn0032769.2.path2;transcripts=FBgn0032769.2.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	36912679	36913893	.	+	.	ID=FBgn0032769.2.mrna2;geneID=FBgn0032769.2.path2;Name=FBgn0032769.2;Dir=sensecoverage=100.0;identity=99.1;matches=987;mismatches=9;indels=0;unknowns=0;locus=RLOC_00002204
ChrX	stalkie_big_nohaplotig	exon	36912679	36912821	100	+	.	Parent=FBgn0032769.2.mrna2;Target=FBgn0032769.2 1 143 +
ChrX	stalkie_big_nohaplotig	exon	36912905	36913359	98	+	.	Parent=FBgn0032769.2.mrna2;Target=FBgn0032769.2 144 598 +
ChrX	stalkie_big_nohaplotig	exon	36913427	36913714	98	+	.	Parent=FBgn0032769.2.mrna2;Target=FBgn0032769.2 599 886 +
ChrX	stalkie_big_nohaplotig	exon	36913784	36913893	100	+	.	Parent=FBgn0032769.2.mrna2;Target=FBgn0032769.2 887 996 +
ChrX	stalkie_big_nohaplotig	CDS	36912679	36912821	.	+	0	Parent=FBgn0032769.2.mrna2;Target=FBgn0032769.2 1 143 +
ChrX	stalkie_big_nohaplotig	CDS	36912905	36913359	.	+	1	Parent=FBgn0032769.2.mrna2;Target=FBgn0032769.2 144 598 +
ChrX	stalkie_big_nohaplotig	CDS	36913427	36913714	.	+	2	Parent=FBgn0032769.2.mrna2;Target=FBgn0032769.2 599 886 +
ChrX	stalkie_big_nohaplotig	CDS	36913784	36913893	.	+	2	Parent=FBgn0032769.2.mrna2;Target=FBgn0032769.2 887 996 +
ChrX	gffcl	locus	36968789	36976867	.	+	.	ID=RLOC_00002205;geneIDs=FBgn0031517.1.path1,comp147332_c0_seq1.path1;transcripts=FBgn0031517.1.mrna1,comp147332_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36968789	36976867	.	+	.	ID=FBgn0031517.1.mrna1;geneID=FBgn0031517.1.path1;Name=FBgn0031517.1;Dir=sensecoverage=100.0;identity=99.7;matches=1438;mismatches=5;indels=0;unknowns=0;locus=RLOC_00002205
ChrX	stalkie_big_nohaplotig	exon	36968789	36968897	96	+	.	Parent=FBgn0031517.1.mrna1;Target=FBgn0031517.1 1 109 +
ChrX	stalkie_big_nohaplotig	exon	36975246	36975478	100	+	.	Parent=FBgn0031517.1.mrna1;Target=FBgn0031517.1 110 342 +
ChrX	stalkie_big_nohaplotig	exon	36975541	36975671	100	+	.	Parent=FBgn0031517.1.mrna1;Target=FBgn0031517.1 343 473 +
ChrX	stalkie_big_nohaplotig	exon	36975734	36976074	100	+	.	Parent=FBgn0031517.1.mrna1;Target=FBgn0031517.1 474 814 +
ChrX	stalkie_big_nohaplotig	exon	36976183	36976601	100	+	.	Parent=FBgn0031517.1.mrna1;Target=FBgn0031517.1 815 1233 +
ChrX	stalkie_big_nohaplotig	exon	36976658	36976867	99	+	.	Parent=FBgn0031517.1.mrna1;Target=FBgn0031517.1 1234 1443 +
ChrX	stalkie_big_nohaplotig	CDS	36968789	36968897	.	+	0	Parent=FBgn0031517.1.mrna1;Target=FBgn0031517.1 1 109 +
ChrX	stalkie_big_nohaplotig	CDS	36975246	36975478	.	+	2	Parent=FBgn0031517.1.mrna1;Target=FBgn0031517.1 110 342 +
ChrX	stalkie_big_nohaplotig	CDS	36975541	36975671	.	+	0	Parent=FBgn0031517.1.mrna1;Target=FBgn0031517.1 343 473 +
ChrX	stalkie_big_nohaplotig	CDS	36975734	36976074	.	+	1	Parent=FBgn0031517.1.mrna1;Target=FBgn0031517.1 474 814 +
ChrX	stalkie_big_nohaplotig	CDS	36976183	36976601	.	+	2	Parent=FBgn0031517.1.mrna1;Target=FBgn0031517.1 815 1233 +
ChrX	stalkie_big_nohaplotig	CDS	36976658	36976867	.	+	0	Parent=FBgn0031517.1.mrna1;Target=FBgn0031517.1 1234 1443 +
ChrX	stalkie_big_nohaplotig	mRNA	36974679	36975268	.	+	.	ID=comp147332_c0_seq1.mrna1;geneID=comp147332_c0_seq1.path1;Name=comp147332_c0_seq1;Dir=indeterminatecoverage=96.6;identity=98.6;matches=582;mismatches=8;indels=0;unknowns=0;Target=comp147332_c0_seq1 611 22 .;CDS_Target=comp147332_c0_seq1 480 361 .;locus=RLOC_00002205
ChrX	stalkie_big_nohaplotig	exon	36974679	36975268	98	+	.	Parent=comp147332_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36975018	36975137	.	+	0	Parent=comp147332_c0_seq1.mrna1
ChrX	gffcl	locus	36971062	36972742	.	+	.	ID=RLOC_00002206;geneIDs=comp162364_c1_seq1.path1;transcripts=comp162364_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36971062	36972742	.	+	.	ID=comp162364_c1_seq1.mrna1;geneID=comp162364_c1_seq1.path1;Name=comp162364_c1_seq1;Dir=indeterminatecoverage=99.9;identity=94.7;matches=1630;mismatches=43;indels=49;unknowns=0;Target=comp162364_c1_seq1 1714 1 .;CDS_Target=comp162364_c1_seq1 149 3 .;locus=RLOC_00002206
ChrX	stalkie_big_nohaplotig	exon	36971062	36972742	94	+	.	Parent=comp162364_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36971064	36971210	.	+	0	Parent=comp162364_c1_seq1.mrna1
ChrX	gffcl	locus	36974387	36974590	.	-	.	ID=RLOC_00002207;geneIDs=comp147679_c0_seq1.path1;transcripts=comp147679_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36974387	36974590	.	-	.	ID=comp147679_c0_seq1.mrna1;geneID=comp147679_c0_seq1.path1;Name=comp147679_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.6;matches=195;mismatches=8;indels=1;unknowns=0;Target=comp147679_c0_seq1 203 1 .;CDS_Target=comp147679_c0_seq1 171 91 .;locus=RLOC_00002207
ChrX	stalkie_big_nohaplotig	exon	36974387	36974590	95	-	.	Parent=comp147679_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	36974419	36974499	.	-	0	Parent=comp147679_c0_seq1.mrna1
ChrX	gffcl	locus	36996937	37003024	.	+	.	ID=RLOC_00002208;geneIDs=FBgn0031518.1.path1;transcripts=FBgn0031518.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	36996937	37003024	.	+	.	ID=FBgn0031518.1.mrna1;geneID=FBgn0031518.1.path1;Name=FBgn0031518.1;Dir=sensecoverage=100.0;identity=100.0;matches=1605;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002208
ChrX	stalkie_big_nohaplotig	exon	36996937	36997105	100	+	.	Parent=FBgn0031518.1.mrna1;Target=FBgn0031518.1 1 169 +
ChrX	stalkie_big_nohaplotig	exon	36997173	36997231	100	+	.	Parent=FBgn0031518.1.mrna1;Target=FBgn0031518.1 170 228 +
ChrX	stalkie_big_nohaplotig	exon	36997296	36997444	100	+	.	Parent=FBgn0031518.1.mrna1;Target=FBgn0031518.1 229 377 +
ChrX	stalkie_big_nohaplotig	exon	36997506	36997545	100	+	.	Parent=FBgn0031518.1.mrna1;Target=FBgn0031518.1 378 417 +
ChrX	stalkie_big_nohaplotig	exon	36997612	36997777	100	+	.	Parent=FBgn0031518.1.mrna1;Target=FBgn0031518.1 418 583 +
ChrX	stalkie_big_nohaplotig	exon	36999318	36999472	100	+	.	Parent=FBgn0031518.1.mrna1;Target=FBgn0031518.1 584 738 +
ChrX	stalkie_big_nohaplotig	exon	36999539	36999764	100	+	.	Parent=FBgn0031518.1.mrna1;Target=FBgn0031518.1 739 964 +
ChrX	stalkie_big_nohaplotig	exon	37000277	37000415	100	+	.	Parent=FBgn0031518.1.mrna1;Target=FBgn0031518.1 965 1103 +
ChrX	stalkie_big_nohaplotig	exon	37000487	37000592	100	+	.	Parent=FBgn0031518.1.mrna1;Target=FBgn0031518.1 1104 1209 +
ChrX	stalkie_big_nohaplotig	exon	37002629	37003024	100	+	.	Parent=FBgn0031518.1.mrna1;Target=FBgn0031518.1 1210 1605 +
ChrX	stalkie_big_nohaplotig	CDS	36996937	36997105	.	+	0	Parent=FBgn0031518.1.mrna1;Target=FBgn0031518.1 1 169 +
ChrX	stalkie_big_nohaplotig	CDS	36997173	36997231	.	+	2	Parent=FBgn0031518.1.mrna1;Target=FBgn0031518.1 170 228 +
ChrX	stalkie_big_nohaplotig	CDS	36997296	36997444	.	+	0	Parent=FBgn0031518.1.mrna1;Target=FBgn0031518.1 229 377 +
ChrX	stalkie_big_nohaplotig	CDS	36997506	36997545	.	+	1	Parent=FBgn0031518.1.mrna1;Target=FBgn0031518.1 378 417 +
ChrX	stalkie_big_nohaplotig	CDS	36997612	36997777	.	+	0	Parent=FBgn0031518.1.mrna1;Target=FBgn0031518.1 418 583 +
ChrX	stalkie_big_nohaplotig	CDS	36999318	36999472	.	+	2	Parent=FBgn0031518.1.mrna1;Target=FBgn0031518.1 584 738 +
ChrX	stalkie_big_nohaplotig	CDS	36999539	36999764	.	+	0	Parent=FBgn0031518.1.mrna1;Target=FBgn0031518.1 739 964 +
ChrX	stalkie_big_nohaplotig	CDS	37000277	37000415	.	+	2	Parent=FBgn0031518.1.mrna1;Target=FBgn0031518.1 965 1103 +
ChrX	stalkie_big_nohaplotig	CDS	37000487	37000592	.	+	1	Parent=FBgn0031518.1.mrna1;Target=FBgn0031518.1 1104 1209 +
ChrX	stalkie_big_nohaplotig	CDS	37002629	37003024	.	+	0	Parent=FBgn0031518.1.mrna1;Target=FBgn0031518.1 1210 1605 +
ChrX	gffcl	locus	37024180	37027366	.	+	.	ID=RLOC_00002209;geneIDs=FBgn0031520.1.path1;transcripts=FBgn0031520.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37024180	37027366	.	+	.	ID=FBgn0031520.1.mrna1;geneID=FBgn0031520.1.path1;Name=FBgn0031520.1;Dir=sensecoverage=100.0;identity=100.0;matches=1452;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002209
ChrX	stalkie_big_nohaplotig	exon	37024180	37024243	100	+	.	Parent=FBgn0031520.1.mrna1;Target=FBgn0031520.1 1 64 +
ChrX	stalkie_big_nohaplotig	exon	37024339	37024568	100	+	.	Parent=FBgn0031520.1.mrna1;Target=FBgn0031520.1 65 294 +
ChrX	stalkie_big_nohaplotig	exon	37024639	37025310	100	+	.	Parent=FBgn0031520.1.mrna1;Target=FBgn0031520.1 295 966 +
ChrX	stalkie_big_nohaplotig	exon	37026747	37026950	100	+	.	Parent=FBgn0031520.1.mrna1;Target=FBgn0031520.1 967 1170 +
ChrX	stalkie_big_nohaplotig	exon	37027005	37027070	100	+	.	Parent=FBgn0031520.1.mrna1;Target=FBgn0031520.1 1171 1236 +
ChrX	stalkie_big_nohaplotig	exon	37027151	37027366	100	+	.	Parent=FBgn0031520.1.mrna1;Target=FBgn0031520.1 1237 1452 +
ChrX	stalkie_big_nohaplotig	CDS	37024180	37024243	.	+	0	Parent=FBgn0031520.1.mrna1;Target=FBgn0031520.1 1 64 +
ChrX	stalkie_big_nohaplotig	CDS	37024339	37024568	.	+	2	Parent=FBgn0031520.1.mrna1;Target=FBgn0031520.1 65 294 +
ChrX	stalkie_big_nohaplotig	CDS	37024639	37025310	.	+	0	Parent=FBgn0031520.1.mrna1;Target=FBgn0031520.1 295 966 +
ChrX	stalkie_big_nohaplotig	CDS	37026747	37026950	.	+	0	Parent=FBgn0031520.1.mrna1;Target=FBgn0031520.1 967 1170 +
ChrX	stalkie_big_nohaplotig	CDS	37027005	37027070	.	+	0	Parent=FBgn0031520.1.mrna1;Target=FBgn0031520.1 1171 1236 +
ChrX	stalkie_big_nohaplotig	CDS	37027151	37027366	.	+	0	Parent=FBgn0031520.1.mrna1;Target=FBgn0031520.1 1237 1452 +
ChrX	gffcl	locus	37031683	37035910	.	+	.	ID=RLOC_00002210;geneIDs=FBgn0053281.1.path1;transcripts=FBgn0053281.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37031683	37035910	.	+	.	ID=FBgn0053281.1.mrna1;geneID=FBgn0053281.1.path1;Name=FBgn0053281.1;Dir=sensecoverage=100.0;identity=99.9;matches=1406;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002210
ChrX	stalkie_big_nohaplotig	exon	37031683	37031758	100	+	.	Parent=FBgn0053281.1.mrna1;Target=FBgn0053281.1 1 76 +
ChrX	stalkie_big_nohaplotig	exon	37034176	37034408	100	+	.	Parent=FBgn0053281.1.mrna1;Target=FBgn0053281.1 77 309 +
ChrX	stalkie_big_nohaplotig	exon	37034474	37034604	100	+	.	Parent=FBgn0053281.1.mrna1;Target=FBgn0053281.1 310 440 +
ChrX	stalkie_big_nohaplotig	exon	37034677	37034869	100	+	.	Parent=FBgn0053281.1.mrna1;Target=FBgn0053281.1 441 633 +
ChrX	stalkie_big_nohaplotig	exon	37034942	37035089	100	+	.	Parent=FBgn0053281.1.mrna1;Target=FBgn0053281.1 634 781 +
ChrX	stalkie_big_nohaplotig	exon	37035161	37035375	100	+	.	Parent=FBgn0053281.1.mrna1;Target=FBgn0053281.1 782 996 +
ChrX	stalkie_big_nohaplotig	exon	37035439	37035705	99	+	.	Parent=FBgn0053281.1.mrna1;Target=FBgn0053281.1 997 1263 +
ChrX	stalkie_big_nohaplotig	exon	37035767	37035910	100	+	.	Parent=FBgn0053281.1.mrna1;Target=FBgn0053281.1 1264 1407 +
ChrX	stalkie_big_nohaplotig	CDS	37031683	37031758	.	+	0	Parent=FBgn0053281.1.mrna1;Target=FBgn0053281.1 1 76 +
ChrX	stalkie_big_nohaplotig	CDS	37034176	37034408	.	+	2	Parent=FBgn0053281.1.mrna1;Target=FBgn0053281.1 77 309 +
ChrX	stalkie_big_nohaplotig	CDS	37034474	37034604	.	+	0	Parent=FBgn0053281.1.mrna1;Target=FBgn0053281.1 310 440 +
ChrX	stalkie_big_nohaplotig	CDS	37034677	37034869	.	+	1	Parent=FBgn0053281.1.mrna1;Target=FBgn0053281.1 441 633 +
ChrX	stalkie_big_nohaplotig	CDS	37034942	37035089	.	+	0	Parent=FBgn0053281.1.mrna1;Target=FBgn0053281.1 634 781 +
ChrX	stalkie_big_nohaplotig	CDS	37035161	37035375	.	+	2	Parent=FBgn0053281.1.mrna1;Target=FBgn0053281.1 782 996 +
ChrX	stalkie_big_nohaplotig	CDS	37035439	37035705	.	+	0	Parent=FBgn0053281.1.mrna1;Target=FBgn0053281.1 997 1263 +
ChrX	stalkie_big_nohaplotig	CDS	37035767	37035910	.	+	0	Parent=FBgn0053281.1.mrna1;Target=FBgn0053281.1 1264 1407 +
ChrX	gffcl	locus	37039847	37046339	.	.	.	ID=RLOC_00002211;geneIDs=FBgn0053282.1.path1,comp135397_c0_seq1.path1,comp1501232_c0_seq1.path1;transcripts=FBgn0053282.1.mrna1,comp1501232_c0_seq1.mrna1,comp135397_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37039847	37046339	.	+	.	ID=FBgn0053282.1.mrna1;geneID=FBgn0053282.1.path1;Name=FBgn0053282.1;Dir=sensecoverage=100.0;identity=99.8;matches=1488;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002211
ChrX	stalkie_big_nohaplotig	exon	37039847	37040033	100	+	.	Parent=FBgn0053282.1.mrna1;Target=FBgn0053282.1 1 187 +
ChrX	stalkie_big_nohaplotig	exon	37040123	37040352	99	+	.	Parent=FBgn0053282.1.mrna1;Target=FBgn0053282.1 188 417 +
ChrX	stalkie_big_nohaplotig	exon	37041628	37041758	100	+	.	Parent=FBgn0053282.1.mrna1;Target=FBgn0053282.1 418 548 +
ChrX	stalkie_big_nohaplotig	exon	37045281	37045624	100	+	.	Parent=FBgn0053282.1.mrna1;Target=FBgn0053282.1 549 892 +
ChrX	stalkie_big_nohaplotig	exon	37045685	37046085	99	+	.	Parent=FBgn0053282.1.mrna1;Target=FBgn0053282.1 893 1293 +
ChrX	stalkie_big_nohaplotig	exon	37046142	37046339	99	+	.	Parent=FBgn0053282.1.mrna1;Target=FBgn0053282.1 1294 1491 +
ChrX	stalkie_big_nohaplotig	CDS	37039847	37040033	.	+	0	Parent=FBgn0053282.1.mrna1;Target=FBgn0053282.1 1 187 +
ChrX	stalkie_big_nohaplotig	CDS	37040123	37040352	.	+	2	Parent=FBgn0053282.1.mrna1;Target=FBgn0053282.1 188 417 +
ChrX	stalkie_big_nohaplotig	CDS	37041628	37041758	.	+	0	Parent=FBgn0053282.1.mrna1;Target=FBgn0053282.1 418 548 +
ChrX	stalkie_big_nohaplotig	CDS	37045281	37045624	.	+	1	Parent=FBgn0053282.1.mrna1;Target=FBgn0053282.1 549 892 +
ChrX	stalkie_big_nohaplotig	CDS	37045685	37046085	.	+	2	Parent=FBgn0053282.1.mrna1;Target=FBgn0053282.1 893 1293 +
ChrX	stalkie_big_nohaplotig	CDS	37046142	37046339	.	+	0	Parent=FBgn0053282.1.mrna1;Target=FBgn0053282.1 1294 1491 +
ChrX	stalkie_big_nohaplotig	mRNA	37041735	37042046	.	-	.	ID=comp1501232_c0_seq1.mrna1;geneID=comp1501232_c0_seq1.path1;Name=comp1501232_c0_seq1;Dir=indeterminatecoverage=97.2;identity=100.0;matches=312;mismatches=0;indels=0;unknowns=0;Target=comp1501232_c0_seq1 321 10 .;CDS_Target=comp1501232_c0_seq1 89 12 .;locus=RLOC_00002211
ChrX	stalkie_big_nohaplotig	exon	37041735	37042046	100	-	.	Parent=comp1501232_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37041967	37042044	.	-	0	Parent=comp1501232_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37044395	37045301	.	-	.	ID=comp135397_c0_seq1.mrna1;geneID=comp135397_c0_seq1.path1;Name=comp135397_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=903;mismatches=4;indels=12;unknowns=0;Target=comp135397_c0_seq1 919 1 .;CDS_Target=comp135397_c0_seq1 324 190 .;locus=RLOC_00002211
ChrX	stalkie_big_nohaplotig	exon	37044395	37045301	98	-	.	Parent=comp135397_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37044978	37045112	.	-	0	Parent=comp135397_c0_seq1.mrna1
ChrX	gffcl	locus	37042150	37043121	.	+	.	ID=RLOC_00002212;geneIDs=comp119056_c0_seq1.path1;transcripts=comp119056_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37042150	37043121	.	+	.	ID=comp119056_c0_seq1.mrna1;geneID=comp119056_c0_seq1.path1;Name=comp119056_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=967;mismatches=4;indels=2;unknowns=0;Target=comp119056_c0_seq1 972 1 .;CDS_Target=comp119056_c0_seq1 867 637 .;locus=RLOC_00002212
ChrX	stalkie_big_nohaplotig	exon	37042150	37043121	99	+	.	Parent=comp119056_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37042785	37043015	.	+	0	Parent=comp119056_c0_seq1.mrna1
ChrX	gffcl	locus	37043463	37044221	.	+	.	ID=RLOC_00002213;geneIDs=comp141412_c0_seq1.path1;transcripts=comp141412_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37043463	37044221	.	+	.	ID=comp141412_c0_seq1.mrna1;geneID=comp141412_c0_seq1.path1;Name=comp141412_c0_seq1;Dir=indeterminatecoverage=99.5;identity=91.9;matches=736;mismatches=16;indels=49;unknowns=0;Target=comp141412_c0_seq1 798 5 .;CDS_Target=comp141412_c0_seq1 374 285 .;locus=RLOC_00002213
ChrX	stalkie_big_nohaplotig	exon	37043463	37044221	91	+	.	Parent=comp141412_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37043735	37043824	.	+	0	Parent=comp141412_c0_seq1.mrna1
ChrX	gffcl	locus	37051184	37053589	.	-	.	ID=RLOC_00002214;geneIDs=comp155652_c0_seq1.path1;transcripts=comp155652_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37051184	37053589	.	-	.	ID=comp155652_c0_seq1.mrna1;geneID=comp155652_c0_seq1.path1;Name=comp155652_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=463;mismatches=1;indels=0;unknowns=0;Target=comp155652_c0_seq1 2 328 .;locus=RLOC_00002214
ChrX	stalkie_big_nohaplotig	exon	37051184	37051531	99	-	.	Parent=comp155652_c0_seq1.mrna1;Target=comp155652_c0_seq1 1 348 -
ChrX	stalkie_big_nohaplotig	exon	37053474	37053589	100	-	.	Parent=comp155652_c0_seq1.mrna1;Target=comp155652_c0_seq1 349 464 -
ChrX	stalkie_big_nohaplotig	CDS	37051185	37051511	.	-	0	Parent=comp155652_c0_seq1.mrna1
ChrX	gffcl	locus	37052984	37053321	.	-	.	ID=RLOC_00002215;geneIDs=comp152176_c1_seq1.path1;transcripts=comp152176_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37052984	37053321	.	-	.	ID=comp152176_c1_seq1.mrna1;geneID=comp152176_c1_seq1.path1;Name=comp152176_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.0;matches=328;mismatches=10;indels=0;unknowns=0;Target=comp152176_c1_seq1 338 1 .;CDS_Target=comp152176_c1_seq1 280 242 .;locus=RLOC_00002215
ChrX	stalkie_big_nohaplotig	exon	37052984	37053321	97	-	.	Parent=comp152176_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37053042	37053080	.	-	0	Parent=comp152176_c1_seq1.mrna1
ChrX	gffcl	locus	37055657	37058255	.	+	.	ID=RLOC_00002216;geneIDs=comp155652_c0_seq1.path2;transcripts=comp155652_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	37055657	37058255	.	+	.	ID=comp155652_c0_seq1.mrna2;geneID=comp155652_c0_seq1.path2;Name=comp155652_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=461;mismatches=3;indels=0;unknowns=0;Target=comp155652_c0_seq1 2 328 .;locus=RLOC_00002216
ChrX	stalkie_big_nohaplotig	exon	37055657	37055772	100	+	.	Parent=comp155652_c0_seq1.mrna2;Target=comp155652_c0_seq1 349 464 -
ChrX	stalkie_big_nohaplotig	exon	37057908	37058255	99	+	.	Parent=comp155652_c0_seq1.mrna2;Target=comp155652_c0_seq1 1 348 -
ChrX	stalkie_big_nohaplotig	CDS	37057928	37058254	.	+	0	Parent=comp155652_c0_seq1.mrna2
ChrX	gffcl	locus	37055925	37056219	.	+	.	ID=RLOC_00002217;geneIDs=comp152176_c1_seq1.path2;transcripts=comp152176_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	37055925	37056219	.	+	.	ID=comp152176_c1_seq1.mrna2;geneID=comp152176_c1_seq1.path2;Name=comp152176_c1_seq1;Dir=indeterminatecoverage=100.0;identity=84.0;matches=284;mismatches=11;indels=43;unknowns=0;Target=comp152176_c1_seq1 338 1 .;CDS_Target=comp152176_c1_seq1 280 242 .;locus=RLOC_00002217
ChrX	stalkie_big_nohaplotig	exon	37055925	37056219	84	+	.	Parent=comp152176_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	37056123	37056161	.	+	0	Parent=comp152176_c1_seq1.mrna2
ChrX	gffcl	locus	37060487	37061128	.	+	.	ID=RLOC_00002218;geneIDs=comp146789_c0_seq1.path1;transcripts=comp146789_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37060487	37061128	.	+	.	ID=comp146789_c0_seq1.mrna1;geneID=comp146789_c0_seq1.path1;Name=comp146789_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.1;matches=636;mismatches=2;indels=4;unknowns=0;Target=comp146789_c0_seq1 638 1 .;CDS_Target=comp146789_c0_seq1 307 194 .;locus=RLOC_00002218
ChrX	stalkie_big_nohaplotig	exon	37060487	37061128	99	+	.	Parent=comp146789_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37060680	37060793	.	+	0	Parent=comp146789_c0_seq1.mrna1
ChrX	gffcl	locus	37065220	37066025	.	-	.	ID=RLOC_00002219;geneIDs=comp135730_c0_seq1.path1,comp139221_c0_seq1.path1;transcripts=comp135730_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37065220	37065726	.	-	.	ID=comp135730_c0_seq1.mrna1;geneID=comp135730_c0_seq1.path1;Name=comp135730_c0_seq1;Dir=indeterminatecoverage=97.0;identity=99.6;matches=507;mismatches=0;indels=2;unknowns=0;Target=comp135730_c0_seq1 519 11 .;CDS_Target=comp135730_c0_seq1 406 305 .;locus=RLOC_00002219
ChrX	stalkie_big_nohaplotig	exon	37065220	37065726	99	-	.	Parent=comp135730_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37065333	37065432	.	-	0	Parent=comp135730_c0_seq1.mrna1
ChrX	gffcl	locus	37066545	37087709	.	-	.	ID=RLOC_00002220;geneIDs=FBgn0051719.1.path1;transcripts=FBgn0051719.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37066545	37087709	.	-	.	ID=FBgn0051719.1.mrna1;geneID=FBgn0051719.1.path1;Name=FBgn0051719.1;Dir=sensecoverage=92.4;identity=100.0;matches=1653;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002220
ChrX	stalkie_big_nohaplotig	exon	37066545	37066616	100	-	.	Parent=FBgn0051719.1.mrna1;Target=FBgn0051719.1 1717 1788 +
ChrX	stalkie_big_nohaplotig	exon	37066685	37066840	100	-	.	Parent=FBgn0051719.1.mrna1;Target=FBgn0051719.1 1561 1716 +
ChrX	stalkie_big_nohaplotig	exon	37066966	37067255	100	-	.	Parent=FBgn0051719.1.mrna1;Target=FBgn0051719.1 1271 1560 +
ChrX	stalkie_big_nohaplotig	exon	37067320	37067553	100	-	.	Parent=FBgn0051719.1.mrna1;Target=FBgn0051719.1 1037 1270 +
ChrX	stalkie_big_nohaplotig	exon	37067633	37067823	100	-	.	Parent=FBgn0051719.1.mrna1;Target=FBgn0051719.1 846 1036 +
ChrX	stalkie_big_nohaplotig	exon	37068423	37068643	100	-	.	Parent=FBgn0051719.1.mrna1;Target=FBgn0051719.1 625 845 +
ChrX	stalkie_big_nohaplotig	exon	37079285	37079372	100	-	.	Parent=FBgn0051719.1.mrna1;Target=FBgn0051719.1 537 624 +
ChrX	stalkie_big_nohaplotig	exon	37082759	37082981	100	-	.	Parent=FBgn0051719.1.mrna1;Target=FBgn0051719.1 314 536 +
ChrX	stalkie_big_nohaplotig	exon	37086762	37086849	100	-	.	Parent=FBgn0051719.1.mrna1;Target=FBgn0051719.1 226 313 +
ChrX	stalkie_big_nohaplotig	exon	37087620	37087709	100	-	.	Parent=FBgn0051719.1.mrna1;Target=FBgn0051719.1 136 225 +
ChrX	stalkie_big_nohaplotig	CDS	37066545	37066616	.	-	0	Parent=FBgn0051719.1.mrna1;Target=FBgn0051719.1 1717 1788 +
ChrX	stalkie_big_nohaplotig	CDS	37066685	37066840	.	-	0	Parent=FBgn0051719.1.mrna1;Target=FBgn0051719.1 1561 1716 +
ChrX	stalkie_big_nohaplotig	CDS	37066966	37067255	.	-	2	Parent=FBgn0051719.1.mrna1;Target=FBgn0051719.1 1271 1560 +
ChrX	stalkie_big_nohaplotig	CDS	37067320	37067553	.	-	2	Parent=FBgn0051719.1.mrna1;Target=FBgn0051719.1 1037 1270 +
ChrX	stalkie_big_nohaplotig	CDS	37067633	37067823	.	-	1	Parent=FBgn0051719.1.mrna1;Target=FBgn0051719.1 846 1036 +
ChrX	stalkie_big_nohaplotig	CDS	37068423	37068643	.	-	0	Parent=FBgn0051719.1.mrna1;Target=FBgn0051719.1 625 845 +
ChrX	stalkie_big_nohaplotig	CDS	37079285	37079372	.	-	1	Parent=FBgn0051719.1.mrna1;Target=FBgn0051719.1 537 624 +
ChrX	stalkie_big_nohaplotig	CDS	37082759	37082981	.	-	2	Parent=FBgn0051719.1.mrna1;Target=FBgn0051719.1 314 536 +
ChrX	stalkie_big_nohaplotig	CDS	37086762	37086849	.	-	0	Parent=FBgn0051719.1.mrna1;Target=FBgn0051719.1 226 313 +
ChrX	stalkie_big_nohaplotig	CDS	37087620	37087709	.	-	0	Parent=FBgn0051719.1.mrna1;Target=FBgn0051719.1 136 225 +
ChrX	gffcl	locus	37176758	37177783	.	-	.	ID=RLOC_00002221;geneIDs=comp152827_c0_seq1.path2;transcripts=comp152827_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	37176758	37177783	.	-	.	ID=comp152827_c0_seq1.mrna2;geneID=comp152827_c0_seq1.path2;Name=comp152827_c0_seq1;Dir=indeterminatecoverage=82.6;identity=98.3;matches=1025;mismatches=0;indels=18;unknowns=0;Target=comp152827_c0_seq1 1262 221 .;CDS_Target=comp152827_c0_seq1 1262 564 .;locus=RLOC_00002221
ChrX	stalkie_big_nohaplotig	exon	37176758	37177783	98	-	.	Parent=comp152827_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	37176758	37177456	.	-	0	Parent=comp152827_c0_seq1.mrna2
ChrX	gffcl	locus	37188725	39092381	.	-	.	ID=RLOC_00002222;geneIDs=comp104064_c0_seq1.path1;transcripts=comp104064_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37188725	39092381	.	-	.	ID=comp104064_c0_seq1.mrna1;geneID=comp104064_c0_seq1.path1;Name=comp104064_c0_seq1;Dir=indeterminatecoverage=75.8;identity=100.0;matches=285;mismatches=0;indels=0;unknowns=0;Target=comp104064_c0_seq1 216 91 .;locus=RLOC_00002222
ChrX	stalkie_big_nohaplotig	exon	37188725	37188735	100	-	.	Parent=comp104064_c0_seq1.mrna1;Target=comp104064_c0_seq1 296 286 .
ChrX	stalkie_big_nohaplotig	exon	37189253	37189257	100	-	.	Parent=comp104064_c0_seq1.mrna1;Target=comp104064_c0_seq1 285 281 .
ChrX	stalkie_big_nohaplotig	exon	37189479	37189482	100	-	.	Parent=comp104064_c0_seq1.mrna1;Target=comp104064_c0_seq1 280 277 .
ChrX	stalkie_big_nohaplotig	exon	39092117	39092381	100	-	.	Parent=comp104064_c0_seq1.mrna1;Target=comp104064_c0_seq1 276 12 .
ChrX	stalkie_big_nohaplotig	CDS	39092177	39092302	.	-	0	Parent=comp104064_c0_seq1.mrna1
ChrX	gffcl	locus	37257798	37258017	.	+	.	ID=RLOC_00002223;geneIDs=comp152827_c0_seq1.path1;transcripts=comp152827_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37257798	37258017	.	+	.	ID=comp152827_c0_seq1.mrna1;geneID=comp152827_c0_seq1.path1;Name=comp152827_c0_seq1;Dir=indeterminatecoverage=17.4;identity=100.0;matches=220;mismatches=0;indels=0;unknowns=0;Target=comp152827_c0_seq1 220 1 .;locus=RLOC_00002223
ChrX	stalkie_big_nohaplotig	exon	37257798	37258017	100	+	.	Parent=comp152827_c0_seq1.mrna1
ChrX	gffcl	locus	37307122	37309023	.	-	.	ID=RLOC_00002224;geneIDs=ORF394.path1;transcripts=ORF394.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37307122	37309023	.	-	.	ID=ORF394.mrna1;geneID=ORF394.path1;Name=ORF394;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1882;mismatches=20;indels=0;unknowns=0;Target=ORF394 1902 1 .;locus=RLOC_00002224
ChrX	stalkie_big_nohaplotig	exon	37307122	37309023	98	-	.	Parent=ORF394.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37307122	37309023	.	-	0	Parent=ORF394.mrna1
ChrX	gffcl	locus	37329972	37330721	.	+	.	ID=RLOC_00002225;geneIDs=FBgn0034940.1.path1;transcripts=FBgn0034940.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37329972	37330721	.	+	.	ID=FBgn0034940.1.mrna1;geneID=FBgn0034940.1.path1;Name=FBgn0034940.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=748;mismatches=2;indels=0;unknowns=0;Target=FBgn0034940.1 750 1 .;locus=RLOC_00002225
ChrX	stalkie_big_nohaplotig	exon	37329972	37330721	99	+	.	Parent=FBgn0034940.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37329972	37330721	.	+	0	Parent=FBgn0034940.1.mrna1
ChrX	gffcl	locus	37353895	37361313	.	-	.	ID=RLOC_00002226;geneIDs=comp162524_c0_seq1.path2;transcripts=comp162524_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	37353895	37361313	.	-	.	ID=comp162524_c0_seq1.mrna2;geneID=comp162524_c0_seq1.path2;Name=comp162524_c0_seq1;Dir=antisensecoverage=94.3;identity=99.4;matches=1559;mismatches=6;indels=4;unknowns=0;Target=comp162524_c0_seq1 1205 1318 .;locus=RLOC_00002226
ChrX	stalkie_big_nohaplotig	exon	37353895	37354686	99	-	.	Parent=comp162524_c0_seq1.mrna2;Target=comp162524_c0_seq1 47 839 -
ChrX	stalkie_big_nohaplotig	exon	37354757	37355024	100	-	.	Parent=comp162524_c0_seq1.mrna2;Target=comp162524_c0_seq1 840 1107 -
ChrX	stalkie_big_nohaplotig	exon	37357247	37357338	100	-	.	Parent=comp162524_c0_seq1.mrna2;Target=comp162524_c0_seq1 1108 1199 -
ChrX	stalkie_big_nohaplotig	exon	37360841	37361007	100	-	.	Parent=comp162524_c0_seq1.mrna2;Target=comp162524_c0_seq1 1200 1366 -
ChrX	stalkie_big_nohaplotig	exon	37361068	37361313	97	-	.	Parent=comp162524_c0_seq1.mrna2;Target=comp162524_c0_seq1 1367 1615 -
ChrX	stalkie_big_nohaplotig	CDS	37360846	37360959	.	-	0	Parent=comp162524_c0_seq1.mrna2
ChrX	gffcl	locus	37407494	37408073	.	-	.	ID=RLOC_00002227;geneIDs=comp131416_c0_seq1.path1;transcripts=comp131416_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37407494	37408073	.	-	.	ID=comp131416_c0_seq1.mrna1;geneID=comp131416_c0_seq1.path1;Name=comp131416_c0_seq1;Dir=antisensecoverage=99.8;identity=100.0;matches=511;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002227
ChrX	stalkie_big_nohaplotig	exon	37407494	37407805	100	-	.	Parent=comp131416_c0_seq1.mrna1;Target=comp131416_c0_seq1 1 312 -
ChrX	stalkie_big_nohaplotig	exon	37407875	37408073	100	-	.	Parent=comp131416_c0_seq1.mrna1;Target=comp131416_c0_seq1 313 511 -
ChrX	stalkie_big_nohaplotig	CDS	37407755	37407805	.	-	0	Parent=comp131416_c0_seq1.mrna1;Target=comp131416_c0_seq1 262 312 .
ChrX	stalkie_big_nohaplotig	CDS	37407875	37407991	.	-	0	Parent=comp131416_c0_seq1.mrna1;Target=comp131416_c0_seq1 313 429 .
ChrX	gffcl	locus	37409530	37410008	.	-	.	ID=RLOC_00002228;geneIDs=comp135823_c0_seq1.path1;transcripts=comp135823_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37409530	37410008	.	-	.	ID=comp135823_c0_seq1.mrna1;geneID=comp135823_c0_seq1.path1;Name=comp135823_c0_seq1;Dir=antisensecoverage=99.1;identity=100.0;matches=420;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002228
ChrX	stalkie_big_nohaplotig	exon	37409530	37409780	100	-	.	Parent=comp135823_c0_seq1.mrna1;Target=comp135823_c0_seq1 2 252 -
ChrX	stalkie_big_nohaplotig	exon	37409840	37410008	100	-	.	Parent=comp135823_c0_seq1.mrna1;Target=comp135823_c0_seq1 253 421 -
ChrX	stalkie_big_nohaplotig	CDS	37409709	37409780	.	-	0	Parent=comp135823_c0_seq1.mrna1;Target=comp135823_c0_seq1 181 252 .
ChrX	stalkie_big_nohaplotig	CDS	37409840	37410007	.	-	0	Parent=comp135823_c0_seq1.mrna1;Target=comp135823_c0_seq1 253 420 .
ChrX	gffcl	locus	37415147	37416628	.	-	.	ID=RLOC_00002229;geneIDs=FBgn0032358.1.path1;transcripts=FBgn0032358.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37415147	37416628	.	-	.	ID=FBgn0032358.1.mrna1;geneID=FBgn0032358.1.path1;Name=FBgn0032358.1;Dir=sensecoverage=100.0;identity=100.0;matches=915;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002229
ChrX	stalkie_big_nohaplotig	exon	37415147	37415342	100	-	.	Parent=FBgn0032358.1.mrna1;Target=FBgn0032358.1 720 915 +
ChrX	stalkie_big_nohaplotig	exon	37415400	37415673	100	-	.	Parent=FBgn0032358.1.mrna1;Target=FBgn0032358.1 446 719 +
ChrX	stalkie_big_nohaplotig	exon	37415752	37415859	100	-	.	Parent=FBgn0032358.1.mrna1;Target=FBgn0032358.1 338 445 +
ChrX	stalkie_big_nohaplotig	exon	37416151	37416292	100	-	.	Parent=FBgn0032358.1.mrna1;Target=FBgn0032358.1 196 337 +
ChrX	stalkie_big_nohaplotig	exon	37416434	37416628	100	-	.	Parent=FBgn0032358.1.mrna1;Target=FBgn0032358.1 1 195 +
ChrX	stalkie_big_nohaplotig	CDS	37415147	37415342	.	-	1	Parent=FBgn0032358.1.mrna1;Target=FBgn0032358.1 720 915 +
ChrX	stalkie_big_nohaplotig	CDS	37415400	37415673	.	-	2	Parent=FBgn0032358.1.mrna1;Target=FBgn0032358.1 446 719 +
ChrX	stalkie_big_nohaplotig	CDS	37415752	37415859	.	-	2	Parent=FBgn0032358.1.mrna1;Target=FBgn0032358.1 338 445 +
ChrX	stalkie_big_nohaplotig	CDS	37416151	37416292	.	-	0	Parent=FBgn0032358.1.mrna1;Target=FBgn0032358.1 196 337 +
ChrX	stalkie_big_nohaplotig	CDS	37416434	37416628	.	-	0	Parent=FBgn0032358.1.mrna1;Target=FBgn0032358.1 1 195 +
ChrX	gffcl	locus	37421345	37425566	.	-	.	ID=RLOC_00002231;geneIDs=FBgn0026431.1.path1;transcripts=FBgn0026431.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37421345	37425566	.	-	.	ID=FBgn0026431.1.mrna1;geneID=FBgn0026431.1.path1;Name=FBgn0026431.1;Dir=sensecoverage=100.0;identity=100.0;matches=2046;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002231
ChrX	stalkie_big_nohaplotig	exon	37421345	37421549	100	-	.	Parent=FBgn0026431.1.mrna1;Target=FBgn0026431.1 1842 2046 +
ChrX	stalkie_big_nohaplotig	exon	37423098	37423261	100	-	.	Parent=FBgn0026431.1.mrna1;Target=FBgn0026431.1 1678 1841 +
ChrX	stalkie_big_nohaplotig	exon	37423329	37423447	100	-	.	Parent=FBgn0026431.1.mrna1;Target=FBgn0026431.1 1559 1677 +
ChrX	stalkie_big_nohaplotig	exon	37423506	37423872	100	-	.	Parent=FBgn0026431.1.mrna1;Target=FBgn0026431.1 1192 1558 +
ChrX	stalkie_big_nohaplotig	exon	37423949	37424458	100	-	.	Parent=FBgn0026431.1.mrna1;Target=FBgn0026431.1 682 1191 +
ChrX	stalkie_big_nohaplotig	exon	37424691	37424853	100	-	.	Parent=FBgn0026431.1.mrna1;Target=FBgn0026431.1 519 681 +
ChrX	stalkie_big_nohaplotig	exon	37424925	37425216	100	-	.	Parent=FBgn0026431.1.mrna1;Target=FBgn0026431.1 227 518 +
ChrX	stalkie_big_nohaplotig	exon	37425289	37425442	100	-	.	Parent=FBgn0026431.1.mrna1;Target=FBgn0026431.1 73 226 +
ChrX	stalkie_big_nohaplotig	exon	37425495	37425566	100	-	.	Parent=FBgn0026431.1.mrna1;Target=FBgn0026431.1 1 72 +
ChrX	stalkie_big_nohaplotig	CDS	37421345	37421549	.	-	1	Parent=FBgn0026431.1.mrna1;Target=FBgn0026431.1 1842 2046 +
ChrX	stalkie_big_nohaplotig	CDS	37423098	37423261	.	-	0	Parent=FBgn0026431.1.mrna1;Target=FBgn0026431.1 1678 1841 +
ChrX	stalkie_big_nohaplotig	CDS	37423329	37423447	.	-	2	Parent=FBgn0026431.1.mrna1;Target=FBgn0026431.1 1559 1677 +
ChrX	stalkie_big_nohaplotig	CDS	37423506	37423872	.	-	0	Parent=FBgn0026431.1.mrna1;Target=FBgn0026431.1 1192 1558 +
ChrX	stalkie_big_nohaplotig	CDS	37423949	37424458	.	-	0	Parent=FBgn0026431.1.mrna1;Target=FBgn0026431.1 682 1191 +
ChrX	stalkie_big_nohaplotig	CDS	37424691	37424853	.	-	1	Parent=FBgn0026431.1.mrna1;Target=FBgn0026431.1 519 681 +
ChrX	stalkie_big_nohaplotig	CDS	37424925	37425216	.	-	2	Parent=FBgn0026431.1.mrna1;Target=FBgn0026431.1 227 518 +
ChrX	stalkie_big_nohaplotig	CDS	37425289	37425442	.	-	0	Parent=FBgn0026431.1.mrna1;Target=FBgn0026431.1 73 226 +
ChrX	stalkie_big_nohaplotig	CDS	37425495	37425566	.	-	0	Parent=FBgn0026431.1.mrna1;Target=FBgn0026431.1 1 72 +
ChrX	gffcl	locus	37428895	37437697	.	+	.	ID=RLOC_00002232;geneIDs=FBgn0021761.1.path1;transcripts=FBgn0021761.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37428895	37437697	.	+	.	ID=FBgn0021761.1.mrna1;geneID=FBgn0021761.1.path1;Name=FBgn0021761.1;Dir=sensecoverage=100.0;identity=99.9;matches=4138;mismatches=5;indels=0;unknowns=0;locus=RLOC_00002232
ChrX	stalkie_big_nohaplotig	exon	37428895	37429014	100	+	.	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 1 120 +
ChrX	stalkie_big_nohaplotig	exon	37429073	37429232	100	+	.	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 121 280 +
ChrX	stalkie_big_nohaplotig	exon	37429285	37429361	100	+	.	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 281 357 +
ChrX	stalkie_big_nohaplotig	exon	37429421	37429577	100	+	.	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 358 514 +
ChrX	stalkie_big_nohaplotig	exon	37429636	37429940	100	+	.	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 515 819 +
ChrX	stalkie_big_nohaplotig	exon	37430106	37430278	100	+	.	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 820 992 +
ChrX	stalkie_big_nohaplotig	exon	37430336	37431044	100	+	.	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 993 1701 +
ChrX	stalkie_big_nohaplotig	exon	37431100	37431379	100	+	.	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 1702 1981 +
ChrX	stalkie_big_nohaplotig	exon	37432443	37432685	100	+	.	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 1982 2224 +
ChrX	stalkie_big_nohaplotig	exon	37432749	37432910	99	+	.	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 2225 2386 +
ChrX	stalkie_big_nohaplotig	exon	37432985	37433385	99	+	.	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 2387 2787 +
ChrX	stalkie_big_nohaplotig	exon	37435206	37435351	100	+	.	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 2788 2933 +
ChrX	stalkie_big_nohaplotig	exon	37436111	37436603	100	+	.	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 2934 3426 +
ChrX	stalkie_big_nohaplotig	exon	37436774	37437240	99	+	.	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 3427 3893 +
ChrX	stalkie_big_nohaplotig	exon	37437305	37437427	100	+	.	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 3894 4016 +
ChrX	stalkie_big_nohaplotig	exon	37437571	37437697	99	+	.	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 4017 4143 +
ChrX	stalkie_big_nohaplotig	CDS	37428895	37429014	.	+	0	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 1 120 +
ChrX	stalkie_big_nohaplotig	CDS	37429073	37429232	.	+	0	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 121 280 +
ChrX	stalkie_big_nohaplotig	CDS	37429285	37429361	.	+	2	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 281 357 +
ChrX	stalkie_big_nohaplotig	CDS	37429421	37429577	.	+	0	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 358 514 +
ChrX	stalkie_big_nohaplotig	CDS	37429636	37429940	.	+	2	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 515 819 +
ChrX	stalkie_big_nohaplotig	CDS	37430106	37430278	.	+	0	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 820 992 +
ChrX	stalkie_big_nohaplotig	CDS	37430336	37431044	.	+	1	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 993 1701 +
ChrX	stalkie_big_nohaplotig	CDS	37431100	37431379	.	+	0	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 1702 1981 +
ChrX	stalkie_big_nohaplotig	CDS	37432443	37432685	.	+	2	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 1982 2224 +
ChrX	stalkie_big_nohaplotig	CDS	37432749	37432910	.	+	2	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 2225 2386 +
ChrX	stalkie_big_nohaplotig	CDS	37432985	37433385	.	+	2	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 2387 2787 +
ChrX	stalkie_big_nohaplotig	CDS	37435206	37435351	.	+	0	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 2788 2933 +
ChrX	stalkie_big_nohaplotig	CDS	37436111	37436603	.	+	1	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 2934 3426 +
ChrX	stalkie_big_nohaplotig	CDS	37436774	37437240	.	+	0	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 3427 3893 +
ChrX	stalkie_big_nohaplotig	CDS	37437305	37437427	.	+	1	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 3894 4016 +
ChrX	stalkie_big_nohaplotig	CDS	37437571	37437697	.	+	1	Parent=FBgn0021761.1.mrna1;Target=FBgn0021761.1 4017 4143 +
ChrX	gffcl	locus	37448338	37450031	.	-	.	ID=RLOC_00002233;geneIDs=FBgn0032329.1.path1;transcripts=FBgn0032329.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37448338	37450031	.	-	.	ID=FBgn0032329.1.mrna1;geneID=FBgn0032329.1.path1;Name=FBgn0032329.1;Dir=sensecoverage=100.0;identity=99.9;matches=1073;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002233
ChrX	stalkie_big_nohaplotig	exon	37448338	37449093	99	-	.	Parent=FBgn0032329.1.mrna1;Target=FBgn0032329.1 319 1074 +
ChrX	stalkie_big_nohaplotig	exon	37449152	37449388	100	-	.	Parent=FBgn0032329.1.mrna1;Target=FBgn0032329.1 82 318 +
ChrX	stalkie_big_nohaplotig	exon	37449951	37450031	100	-	.	Parent=FBgn0032329.1.mrna1;Target=FBgn0032329.1 1 81 +
ChrX	stalkie_big_nohaplotig	CDS	37448338	37449093	.	-	0	Parent=FBgn0032329.1.mrna1;Target=FBgn0032329.1 319 1074 +
ChrX	stalkie_big_nohaplotig	CDS	37449152	37449388	.	-	0	Parent=FBgn0032329.1.mrna1;Target=FBgn0032329.1 82 318 +
ChrX	stalkie_big_nohaplotig	CDS	37449951	37450031	.	-	0	Parent=FBgn0032329.1.mrna1;Target=FBgn0032329.1 1 81 +
ChrX	gffcl	locus	37453178	37454275	.	.	.	ID=RLOC_00002234;geneIDs=FBgn0015756.1.path1,comp134982_c0_seq1.path1;transcripts=FBgn0015756.1.mrna1,comp134982_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37453178	37454275	.	+	.	ID=FBgn0015756.1.mrna1;geneID=FBgn0015756.1.path1;Name=FBgn0015756.1;Dir=sensecoverage=100.0;identity=100.0;matches=633;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002234
ChrX	stalkie_big_nohaplotig	exon	37453178	37453233	100	+	.	Parent=FBgn0015756.1.mrna1;Target=FBgn0015756.1 1 56 +
ChrX	stalkie_big_nohaplotig	exon	37453633	37453880	100	+	.	Parent=FBgn0015756.1.mrna1;Target=FBgn0015756.1 57 304 +
ChrX	stalkie_big_nohaplotig	exon	37453947	37454275	100	+	.	Parent=FBgn0015756.1.mrna1;Target=FBgn0015756.1 305 633 +
ChrX	stalkie_big_nohaplotig	CDS	37453178	37453233	.	+	0	Parent=FBgn0015756.1.mrna1;Target=FBgn0015756.1 1 56 +
ChrX	stalkie_big_nohaplotig	CDS	37453633	37453880	.	+	1	Parent=FBgn0015756.1.mrna1;Target=FBgn0015756.1 57 304 +
ChrX	stalkie_big_nohaplotig	CDS	37453947	37454275	.	+	2	Parent=FBgn0015756.1.mrna1;Target=FBgn0015756.1 305 633 +
ChrX	stalkie_big_nohaplotig	mRNA	37453211	37453656	.	-	.	ID=comp134982_c0_seq1.mrna1;geneID=comp134982_c0_seq1.path1;Name=comp134982_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=446;mismatches=0;indels=0;unknowns=0;Target=comp134982_c0_seq1 446 1 .;CDS_Target=comp134982_c0_seq1 120 1 .;locus=RLOC_00002234
ChrX	stalkie_big_nohaplotig	exon	37453211	37453656	100	-	.	Parent=comp134982_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37453537	37453656	.	-	0	Parent=comp134982_c0_seq1.mrna1
ChrX	gffcl	locus	37484440	37485154	.	+	.	ID=RLOC_00002235;geneIDs=comp146952_c0_seq1.path1;transcripts=comp146952_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37484440	37485154	.	+	.	ID=comp146952_c0_seq1.mrna1;geneID=comp146952_c0_seq1.path1;Name=comp146952_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=654;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002235
ChrX	stalkie_big_nohaplotig	exon	37484440	37484509	100	+	.	Parent=comp146952_c0_seq1.mrna1;Target=comp146952_c0_seq1 585 654 -
ChrX	stalkie_big_nohaplotig	exon	37484571	37485154	100	+	.	Parent=comp146952_c0_seq1.mrna1;Target=comp146952_c0_seq1 1 584 -
ChrX	stalkie_big_nohaplotig	CDS	37484441	37484509	.	+	0	Parent=comp146952_c0_seq1.mrna1;Target=comp146952_c0_seq1 585 653 .
ChrX	stalkie_big_nohaplotig	CDS	37484571	37484753	.	+	0	Parent=comp146952_c0_seq1.mrna1;Target=comp146952_c0_seq1 402 584 .
ChrX	gffcl	locus	37485530	37485931	.	+	.	ID=RLOC_00002236;geneIDs=comp927001_c0_seq1.path1;transcripts=comp927001_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37485530	37485931	.	+	.	ID=comp927001_c0_seq1.mrna1;geneID=comp927001_c0_seq1.path1;Name=comp927001_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=401;mismatches=1;indels=0;unknowns=0;Target=comp927001_c0_seq1 402 1 .;CDS_Target=comp927001_c0_seq1 335 159 .;locus=RLOC_00002236
ChrX	stalkie_big_nohaplotig	exon	37485530	37485931	99	+	.	Parent=comp927001_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37485688	37485864	.	+	0	Parent=comp927001_c0_seq1.mrna1
ChrX	gffcl	locus	37507473	37508234	.	+	.	ID=RLOC_00002238;geneIDs=comp147081_c0_seq1.path1;transcripts=comp147081_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37507473	37508234	.	+	.	ID=comp147081_c0_seq1.mrna1;geneID=comp147081_c0_seq1.path1;Name=comp147081_c0_seq1;Dir=indeterminatecoverage=86.3;identity=99.2;matches=756;mismatches=1;indels=5;unknowns=0;Target=comp147081_c0_seq1 764 8 .;CDS_Target=comp147081_c0_seq1 351 154 .;locus=RLOC_00002238
ChrX	stalkie_big_nohaplotig	exon	37507473	37508234	99	+	.	Parent=comp147081_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37507619	37507816	.	+	0	Parent=comp147081_c0_seq1.mrna1
ChrX	gffcl	locus	37509431	37509667	.	+	.	ID=RLOC_00002239;geneIDs=comp529780_c0_seq1.path1;transcripts=comp529780_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37509431	37509667	.	+	.	ID=comp529780_c0_seq1.mrna1;geneID=comp529780_c0_seq1.path1;Name=comp529780_c0_seq1;Dir=indeterminatecoverage=92.9;identity=100.0;matches=237;mismatches=0;indels=0;unknowns=0;Target=comp529780_c0_seq1 237 1 .;CDS_Target=comp529780_c0_seq1 60 1 .;locus=RLOC_00002239
ChrX	stalkie_big_nohaplotig	exon	37509431	37509667	100	+	.	Parent=comp529780_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37509431	37509490	.	+	0	Parent=comp529780_c0_seq1.mrna1
ChrX	gffcl	locus	37560773	39343441	.	-	.	ID=RLOC_00002242;geneIDs=comp117883_c0_seq1.path1;transcripts=comp117883_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37560773	39343441	.	-	.	ID=comp117883_c0_seq1.mrna1;geneID=comp117883_c0_seq1.path1;Name=comp117883_c0_seq1;Dir=indeterminatecoverage=93.0;identity=96.0;matches=550;mismatches=16;indels=7;unknowns=0;locus=RLOC_00002242
ChrX	stalkie_big_nohaplotig	exon	37560773	37560788	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 667 652 .
ChrX	stalkie_big_nohaplotig	exon	37560924	37560927	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 651 648 .
ChrX	stalkie_big_nohaplotig	exon	37561062	37561066	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 647 643 .
ChrX	stalkie_big_nohaplotig	exon	37564275	37564276	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 642 641 .
ChrX	stalkie_big_nohaplotig	exon	37565941	37565953	92	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 640 627 .
ChrX	stalkie_big_nohaplotig	exon	37565970	37565978	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 614 606 .
ChrX	stalkie_big_nohaplotig	exon	37571955	37571958	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 605 602 .
ChrX	stalkie_big_nohaplotig	exon	37572537	37572540	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 601 598 .
ChrX	stalkie_big_nohaplotig	exon	37572857	37572863	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 597 591 .
ChrX	stalkie_big_nohaplotig	exon	37579486	37579488	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 590 588 .
ChrX	stalkie_big_nohaplotig	exon	37583586	37583589	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 587 584 .
ChrX	stalkie_big_nohaplotig	exon	37583620	37583627	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 524 517 .
ChrX	stalkie_big_nohaplotig	exon	37584406	37584415	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 516 507 .
ChrX	stalkie_big_nohaplotig	exon	37591119	37591129	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 501 491 .
ChrX	stalkie_big_nohaplotig	exon	37600070	37600071	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 490 489 .
ChrX	stalkie_big_nohaplotig	exon	37600416	37600423	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 488 481 .
ChrX	stalkie_big_nohaplotig	exon	37601247	37601262	62	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 480 471 .
ChrX	stalkie_big_nohaplotig	exon	37607878	37607886	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 470 462 .
ChrX	stalkie_big_nohaplotig	exon	37608045	37608048	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 461 458 .
ChrX	stalkie_big_nohaplotig	exon	37608781	37608821	60	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 457 417 .
ChrX	stalkie_big_nohaplotig	exon	37618303	37618310	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 416 409 .
ChrX	stalkie_big_nohaplotig	exon	37625420	37625427	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 408 401 .
ChrX	stalkie_big_nohaplotig	exon	37640773	37640775	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 400 398 .
ChrX	stalkie_big_nohaplotig	exon	37647689	37647692	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 397 394 .
ChrX	stalkie_big_nohaplotig	exon	37654179	37654189	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 393 383 .
ChrX	stalkie_big_nohaplotig	exon	37656969	37656970	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 382 381 .
ChrX	stalkie_big_nohaplotig	exon	37656976	37656983	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 379 372 .
ChrX	stalkie_big_nohaplotig	exon	37656993	37657002	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 363 354 .
ChrX	stalkie_big_nohaplotig	exon	37657545	37657550	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 353 348 .
ChrX	stalkie_big_nohaplotig	exon	37659705	37659706	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 347 346 .
ChrX	stalkie_big_nohaplotig	exon	37671566	37671568	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 345 343 .
ChrX	stalkie_big_nohaplotig	exon	39343115	39343441	100	-	.	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 342 16 .
ChrX	stalkie_big_nohaplotig	CDS	37584413	37584415	.	-	2	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 509 507 .
ChrX	stalkie_big_nohaplotig	CDS	37591119	37591129	.	-	1	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 501 491 .
ChrX	stalkie_big_nohaplotig	CDS	37600070	37600071	.	-	0	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 490 489 .
ChrX	stalkie_big_nohaplotig	CDS	37600416	37600423	.	-	2	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 488 481 .
ChrX	stalkie_big_nohaplotig	CDS	37601247	37601262	.	-	0	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 480 471 .
ChrX	stalkie_big_nohaplotig	CDS	37607878	37607886	.	-	0	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 470 462 .
ChrX	stalkie_big_nohaplotig	CDS	37608045	37608047	.	-	0	Parent=comp117883_c0_seq1.mrna1;Target=comp117883_c0_seq1 461 459 .
ChrX	gffcl	locus	37561555	37571924	.	+	.	ID=RLOC_00002243;geneIDs=FBgn0004872.1.path1,comp163082_c1_seq1.path1;transcripts=comp163082_c1_seq1.mrna1,FBgn0004872.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37561555	37571924	.	+	.	ID=comp163082_c1_seq1.mrna1;geneID=comp163082_c1_seq1.path1;Name=comp163082_c1_seq1;Dir=antisensecoverage=99.4;identity=99.9;matches=3608;mismatches=4;indels=1;unknowns=0;locus=RLOC_00002243
ChrX	stalkie_big_nohaplotig	exon	37561555	37561682	100	+	.	Parent=comp163082_c1_seq1.mrna1;Target=comp163082_c1_seq1 3486 3613 -
ChrX	stalkie_big_nohaplotig	exon	37561765	37562286	99	+	.	Parent=comp163082_c1_seq1.mrna1;Target=comp163082_c1_seq1 2964 3485 -
ChrX	stalkie_big_nohaplotig	exon	37567135	37567809	100	+	.	Parent=comp163082_c1_seq1.mrna1;Target=comp163082_c1_seq1 2289 2963 -
ChrX	stalkie_big_nohaplotig	exon	37567892	37568212	100	+	.	Parent=comp163082_c1_seq1.mrna1;Target=comp163082_c1_seq1 1968 2288 -
ChrX	stalkie_big_nohaplotig	exon	37568282	37568430	100	+	.	Parent=comp163082_c1_seq1.mrna1;Target=comp163082_c1_seq1 1819 1967 -
ChrX	stalkie_big_nohaplotig	exon	37568639	37568839	100	+	.	Parent=comp163082_c1_seq1.mrna1;Target=comp163082_c1_seq1 1618 1818 -
ChrX	stalkie_big_nohaplotig	exon	37568906	37569097	100	+	.	Parent=comp163082_c1_seq1.mrna1;Target=comp163082_c1_seq1 1426 1617 -
ChrX	stalkie_big_nohaplotig	exon	37569186	37569296	100	+	.	Parent=comp163082_c1_seq1.mrna1;Target=comp163082_c1_seq1 1315 1425 -
ChrX	stalkie_big_nohaplotig	exon	37570612	37571924	99	+	.	Parent=comp163082_c1_seq1.mrna1;Target=comp163082_c1_seq1 1 1314 -
ChrX	stalkie_big_nohaplotig	CDS	37561771	37562286	.	+	0	Parent=comp163082_c1_seq1.mrna1;Target=comp163082_c1_seq1 2964 3479 .
ChrX	stalkie_big_nohaplotig	CDS	37567135	37567809	.	+	0	Parent=comp163082_c1_seq1.mrna1;Target=comp163082_c1_seq1 2289 2963 .
ChrX	stalkie_big_nohaplotig	CDS	37567892	37568212	.	+	0	Parent=comp163082_c1_seq1.mrna1;Target=comp163082_c1_seq1 1968 2288 .
ChrX	stalkie_big_nohaplotig	CDS	37568282	37568430	.	+	0	Parent=comp163082_c1_seq1.mrna1;Target=comp163082_c1_seq1 1819 1967 .
ChrX	stalkie_big_nohaplotig	CDS	37568639	37568839	.	+	1	Parent=comp163082_c1_seq1.mrna1;Target=comp163082_c1_seq1 1618 1818 .
ChrX	stalkie_big_nohaplotig	CDS	37568906	37569097	.	+	1	Parent=comp163082_c1_seq1.mrna1;Target=comp163082_c1_seq1 1426 1617 .
ChrX	stalkie_big_nohaplotig	CDS	37569186	37569296	.	+	1	Parent=comp163082_c1_seq1.mrna1;Target=comp163082_c1_seq1 1315 1425 .
ChrX	stalkie_big_nohaplotig	CDS	37570612	37571500	.	+	1	Parent=comp163082_c1_seq1.mrna1;Target=comp163082_c1_seq1 426 1314 .
ChrX	stalkie_big_nohaplotig	mRNA	37561617	37571497	.	+	.	ID=FBgn0004872.1.mrna1;geneID=FBgn0004872.1.path1;Name=FBgn0004872.1;Dir=sensecoverage=100.0;identity=99.9;matches=3077;mismatches=4;indels=0;unknowns=0;locus=RLOC_00002243
ChrX	stalkie_big_nohaplotig	exon	37561617	37561640	100	+	.	Parent=FBgn0004872.1.mrna1;Target=FBgn0004872.1 1 24 +
ChrX	stalkie_big_nohaplotig	exon	37561765	37562286	99	+	.	Parent=FBgn0004872.1.mrna1;Target=FBgn0004872.1 25 546 +
ChrX	stalkie_big_nohaplotig	exon	37567135	37567809	100	+	.	Parent=FBgn0004872.1.mrna1;Target=FBgn0004872.1 547 1221 +
ChrX	stalkie_big_nohaplotig	exon	37567892	37568212	100	+	.	Parent=FBgn0004872.1.mrna1;Target=FBgn0004872.1 1222 1542 +
ChrX	stalkie_big_nohaplotig	exon	37568282	37568430	100	+	.	Parent=FBgn0004872.1.mrna1;Target=FBgn0004872.1 1543 1691 +
ChrX	stalkie_big_nohaplotig	exon	37568639	37568839	100	+	.	Parent=FBgn0004872.1.mrna1;Target=FBgn0004872.1 1692 1892 +
ChrX	stalkie_big_nohaplotig	exon	37568906	37569097	100	+	.	Parent=FBgn0004872.1.mrna1;Target=FBgn0004872.1 1893 2084 +
ChrX	stalkie_big_nohaplotig	exon	37569186	37569296	100	+	.	Parent=FBgn0004872.1.mrna1;Target=FBgn0004872.1 2085 2195 +
ChrX	stalkie_big_nohaplotig	exon	37570612	37571497	99	+	.	Parent=FBgn0004872.1.mrna1;Target=FBgn0004872.1 2196 3081 +
ChrX	stalkie_big_nohaplotig	CDS	37561617	37561640	.	+	0	Parent=FBgn0004872.1.mrna1;Target=FBgn0004872.1 1 24 +
ChrX	stalkie_big_nohaplotig	CDS	37561765	37562286	.	+	0	Parent=FBgn0004872.1.mrna1;Target=FBgn0004872.1 25 546 +
ChrX	stalkie_big_nohaplotig	CDS	37567135	37567809	.	+	0	Parent=FBgn0004872.1.mrna1;Target=FBgn0004872.1 547 1221 +
ChrX	stalkie_big_nohaplotig	CDS	37567892	37568212	.	+	0	Parent=FBgn0004872.1.mrna1;Target=FBgn0004872.1 1222 1542 +
ChrX	stalkie_big_nohaplotig	CDS	37568282	37568430	.	+	0	Parent=FBgn0004872.1.mrna1;Target=FBgn0004872.1 1543 1691 +
ChrX	stalkie_big_nohaplotig	CDS	37568639	37568839	.	+	1	Parent=FBgn0004872.1.mrna1;Target=FBgn0004872.1 1692 1892 +
ChrX	stalkie_big_nohaplotig	CDS	37568906	37569097	.	+	1	Parent=FBgn0004872.1.mrna1;Target=FBgn0004872.1 1893 2084 +
ChrX	stalkie_big_nohaplotig	CDS	37569186	37569296	.	+	1	Parent=FBgn0004872.1.mrna1;Target=FBgn0004872.1 2085 2195 +
ChrX	stalkie_big_nohaplotig	CDS	37570612	37571497	.	+	1	Parent=FBgn0004872.1.mrna1;Target=FBgn0004872.1 2196 3081 +
ChrX	gffcl	locus	37574514	37574733	.	+	.	ID=RLOC_00002244;geneIDs=comp113623_c0_seq1.path1;transcripts=comp113623_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37574514	37574733	.	+	.	ID=comp113623_c0_seq1.mrna1;geneID=comp113623_c0_seq1.path1;Name=comp113623_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=220;mismatches=0;indels=0;unknowns=0;Target=comp113623_c0_seq1 220 1 .;CDS_Target=comp113623_c0_seq1 77 3 .;locus=RLOC_00002244
ChrX	stalkie_big_nohaplotig	exon	37574514	37574733	100	+	.	Parent=comp113623_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37574516	37574590	.	+	0	Parent=comp113623_c0_seq1.mrna1
ChrX	gffcl	locus	37580210	37580655	.	-	.	ID=RLOC_00002245;geneIDs=FBgn0010612.1.path1;transcripts=FBgn0010612.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37580210	37580655	.	-	.	ID=FBgn0010612.1.mrna1;geneID=FBgn0010612.1.path1;Name=FBgn0010612.1;Dir=sensecoverage=100.0;identity=100.0;matches=309;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002245
ChrX	stalkie_big_nohaplotig	exon	37580210	37580466	100	-	.	Parent=FBgn0010612.1.mrna1;Target=FBgn0010612.1 53 309 +
ChrX	stalkie_big_nohaplotig	exon	37580604	37580655	100	-	.	Parent=FBgn0010612.1.mrna1;Target=FBgn0010612.1 1 52 +
ChrX	stalkie_big_nohaplotig	CDS	37580210	37580466	.	-	2	Parent=FBgn0010612.1.mrna1;Target=FBgn0010612.1 53 309 +
ChrX	stalkie_big_nohaplotig	CDS	37580604	37580655	.	-	0	Parent=FBgn0010612.1.mrna1;Target=FBgn0010612.1 1 52 +
ChrX	stalkie_big_nohaplotig	mRNA	37623099	37623766	.	+	.	ID=Dp_FBgn0078325.mrna2;geneID=Dp_FBgn0078325.path2;Name=Dp_FBgn0078325;Dir=sensecoverage=79.9;identity=99.8;matches=598;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002246
ChrX	stalkie_big_nohaplotig	exon	37623099	37623641	99	+	.	Parent=Dp_FBgn0078325.mrna2;Target=Dp_FBgn0078325 121 663 +
ChrX	stalkie_big_nohaplotig	exon	37623711	37623766	100	+	.	Parent=Dp_FBgn0078325.mrna2;Target=Dp_FBgn0078325 664 719 +
ChrX	stalkie_big_nohaplotig	CDS	37623099	37623641	.	+	0	Parent=Dp_FBgn0078325.mrna2;Target=Dp_FBgn0078325 121 663 +
ChrX	stalkie_big_nohaplotig	CDS	37623711	37623764	.	+	0	Parent=Dp_FBgn0078325.mrna2;Target=Dp_FBgn0078325 664 717 +
ChrX	gffcl	locus	37627719	37627995	.	-	.	ID=RLOC_00002247;geneIDs=comp135109_c0_seq1.path1;transcripts=comp135109_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37627719	37627995	.	-	.	ID=comp135109_c0_seq1.mrna1;geneID=comp135109_c0_seq1.path1;Name=comp135109_c0_seq1;Dir=indeterminatecoverage=93.9;identity=100.0;matches=277;mismatches=0;indels=0;unknowns=0;Target=comp135109_c0_seq1 279 3 .;CDS_Target=comp135109_c0_seq1 196 116 .;locus=RLOC_00002247
ChrX	stalkie_big_nohaplotig	exon	37627719	37627995	100	-	.	Parent=comp135109_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37627802	37627882	.	-	0	Parent=comp135109_c0_seq1.mrna1
ChrX	gffcl	locus	37628761	37629283	.	+	.	ID=RLOC_00002248;geneIDs=comp1039484_c0_seq1.path1;transcripts=comp1039484_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37628761	37629283	.	+	.	ID=comp1039484_c0_seq1.mrna1;geneID=comp1039484_c0_seq1.path1;Name=comp1039484_c0_seq1;Dir=indeterminatecoverage=90.5;identity=99.8;matches=522;mismatches=1;indels=0;unknowns=0;Target=comp1039484_c0_seq1 523 1 .;CDS_Target=comp1039484_c0_seq1 115 2 .;locus=RLOC_00002248
ChrX	stalkie_big_nohaplotig	exon	37628761	37629283	99	+	.	Parent=comp1039484_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37628762	37628875	.	+	0	Parent=comp1039484_c0_seq1.mrna1
ChrX	gffcl	locus	37649423	37649745	.	-	.	ID=RLOC_00002249;geneIDs=comp143079_c0_seq1.path1;transcripts=comp143079_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37649423	37649745	.	-	.	ID=comp143079_c0_seq1.mrna1;geneID=comp143079_c0_seq1.path1;Name=comp143079_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=322;mismatches=1;indels=0;unknowns=0;Target=comp143079_c0_seq1 323 1 .;CDS_Target=comp143079_c0_seq1 119 3 .;locus=RLOC_00002249
ChrX	stalkie_big_nohaplotig	exon	37649423	37649745	99	-	.	Parent=comp143079_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37649627	37649743	.	-	0	Parent=comp143079_c0_seq1.mrna1
ChrX	gffcl	locus	37661898	37662700	.	+	.	ID=RLOC_00002250;geneIDs=AAEL012518.1.path1;transcripts=AAEL012518.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37661898	37662700	.	+	.	ID=AAEL012518.1.mrna1;geneID=AAEL012518.1.path1;Name=AAEL012518.1;Dir=indeterminatecoverage=93.6;identity=100.0;matches=803;mismatches=0;indels=0;unknowns=0;Target=AAEL012518.1 858 56 .;CDS_Target=AAEL012518.1 858 58 .;locus=RLOC_00002250
ChrX	stalkie_big_nohaplotig	exon	37661898	37662700	100	+	.	Parent=AAEL012518.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37661900	37662700	.	+	0	Parent=AAEL012518.1.mrna1
ChrX	gffcl	locus	37668879	37669673	.	+	.	ID=RLOC_00002251;geneIDs=FBgn0032345.1.path1;transcripts=FBgn0032345.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37668879	37669673	.	+	.	ID=FBgn0032345.1.mrna1;geneID=FBgn0032345.1.path1;Name=FBgn0032345.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=793;mismatches=2;indels=0;unknowns=0;Target=FBgn0032345.1 795 1 .;locus=RLOC_00002251
ChrX	stalkie_big_nohaplotig	exon	37668879	37669673	99	+	.	Parent=FBgn0032345.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37668879	37669673	.	+	0	Parent=FBgn0032345.1.mrna1
ChrX	gffcl	locus	37672096	37674485	.	-	.	ID=RLOC_00002252;geneIDs=comp162818_c0_seq1.path1;transcripts=comp162818_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37672096	37674485	.	-	.	ID=comp162818_c0_seq1.mrna1;geneID=comp162818_c0_seq1.path1;Name=comp162818_c0_seq1;Dir=sensecoverage=99.9;identity=99.4;matches=2177;mismatches=12;indels=1;unknowns=0;Target=comp162818_c0_seq1 192 569 +;locus=RLOC_00002252
ChrX	stalkie_big_nohaplotig	exon	37672096	37672666	99	-	.	Parent=comp162818_c0_seq1.mrna1;Target=comp162818_c0_seq1 1621 2191 +
ChrX	stalkie_big_nohaplotig	exon	37672727	37673665	100	-	.	Parent=comp162818_c0_seq1.mrna1;Target=comp162818_c0_seq1 682 1620 +
ChrX	stalkie_big_nohaplotig	exon	37673741	37673850	100	-	.	Parent=comp162818_c0_seq1.mrna1;Target=comp162818_c0_seq1 572 681 +
ChrX	stalkie_big_nohaplotig	exon	37673917	37674485	98	-	.	Parent=comp162818_c0_seq1.mrna1;Target=comp162818_c0_seq1 2 571 +
ChrX	stalkie_big_nohaplotig	CDS	37673919	37674296	.	-	0	Parent=comp162818_c0_seq1.mrna1
ChrX	gffcl	locus	37681325	37682298	.	+	.	ID=RLOC_00002253;geneIDs=FBgn0032348.path1;transcripts=FBgn0032348.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37681325	37682298	.	+	.	ID=FBgn0032348.mrna1;geneID=FBgn0032348.path1;Name=FBgn0032348;Dir=indeterminatecoverage=100.0;identity=99.7;matches=972;mismatches=2;indels=1;unknowns=0;Target=FBgn0032348 975 1 .;locus=RLOC_00002253
ChrX	stalkie_big_nohaplotig	exon	37681325	37682298	99	+	.	Parent=FBgn0032348.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37681325	37682298	.	+	0	Parent=FBgn0032348.mrna1
ChrX	gffcl	locus	37682737	37683623	.	+	.	ID=RLOC_00002254;geneIDs=comp155117_c0_seq1.path1;transcripts=comp155117_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37682737	37683623	.	+	.	ID=comp155117_c0_seq1.mrna1;geneID=comp155117_c0_seq1.path1;Name=comp155117_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.0;matches=872;mismatches=15;indels=3;unknowns=0;Target=comp155117_c0_seq1 890 1 .;CDS_Target=comp155117_c0_seq1 317 267 .;locus=RLOC_00002254
ChrX	stalkie_big_nohaplotig	exon	37682737	37683623	97	+	.	Parent=comp155117_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37683002	37683052	.	+	0	Parent=comp155117_c0_seq1.mrna1
ChrX	gffcl	locus	37683806	37685188	.	+	.	ID=RLOC_00002255;geneIDs=comp150628_c0_seq1.path1;transcripts=comp150628_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37683806	37685188	.	+	.	ID=comp150628_c0_seq1.mrna1;geneID=comp150628_c0_seq1.path1;Name=comp150628_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1383;mismatches=0;indels=0;unknowns=0;Target=comp150628_c0_seq1 1383 1 .;CDS_Target=comp150628_c0_seq1 196 89 .;locus=RLOC_00002255
ChrX	stalkie_big_nohaplotig	exon	37683806	37685188	100	+	.	Parent=comp150628_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37683894	37684001	.	+	0	Parent=comp150628_c0_seq1.mrna1
ChrX	gffcl	locus	37718787	37720774	.	-	.	ID=RLOC_00002256;geneIDs=comp160998_c1_seq1.path1;transcripts=comp160998_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37718787	37720774	.	-	.	ID=comp160998_c1_seq1.mrna1;geneID=comp160998_c1_seq1.path1;Name=comp160998_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1976;mismatches=7;indels=7;unknowns=0;Target=comp160998_c1_seq1 1985 1 .;CDS_Target=comp160998_c1_seq1 1558 1442 .;locus=RLOC_00002256
ChrX	stalkie_big_nohaplotig	exon	37718787	37720774	99	-	.	Parent=comp160998_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37719217	37719333	.	-	0	Parent=comp160998_c1_seq1.mrna1
ChrX	gffcl	locus	37739031	37739362	.	-	.	ID=RLOC_00002257;geneIDs=comp72027_c0_seq1.path1;transcripts=comp72027_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37739031	37739362	.	-	.	ID=comp72027_c0_seq1.mrna1;geneID=comp72027_c0_seq1.path1;Name=comp72027_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=332;mismatches=0;indels=0;unknowns=0;Target=comp72027_c0_seq1 332 1 .;CDS_Target=comp72027_c0_seq1 128 3 .;locus=RLOC_00002257
ChrX	stalkie_big_nohaplotig	exon	37739031	37739362	100	-	.	Parent=comp72027_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37739235	37739360	.	-	0	Parent=comp72027_c0_seq1.mrna1
ChrX	gffcl	locus	37849140	37849557	.	+	.	ID=RLOC_00002259;geneIDs=comp138294_c0_seq1.path1;transcripts=comp138294_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37849140	37849557	.	+	.	ID=comp138294_c0_seq1.mrna1;geneID=comp138294_c0_seq1.path1;Name=comp138294_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=416;mismatches=2;indels=0;unknowns=0;Target=comp138294_c0_seq1 418 1 .;CDS_Target=comp138294_c0_seq1 89 3 .;locus=RLOC_00002259
ChrX	stalkie_big_nohaplotig	exon	37849140	37849557	99	+	.	Parent=comp138294_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37849142	37849228	.	+	0	Parent=comp138294_c0_seq1.mrna1
ChrX	gffcl	locus	37855977	37865075	.	-	.	ID=RLOC_00002260;geneIDs=ORF1880.path1,comp158311_c0_seq1.path1;transcripts=comp158311_c0_seq1.mrna1,ORF1880.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37855977	37865075	.	-	.	ID=comp158311_c0_seq1.mrna1;geneID=comp158311_c0_seq1.path1;Name=comp158311_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=1632;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002260
ChrX	stalkie_big_nohaplotig	exon	37855977	37856533	99	-	.	Parent=comp158311_c0_seq1.mrna1;Target=comp158311_c0_seq1 1077 1633 +
ChrX	stalkie_big_nohaplotig	exon	37856632	37856866	100	-	.	Parent=comp158311_c0_seq1.mrna1;Target=comp158311_c0_seq1 842 1076 +
ChrX	stalkie_big_nohaplotig	exon	37860860	37861099	100	-	.	Parent=comp158311_c0_seq1.mrna1;Target=comp158311_c0_seq1 602 841 +
ChrX	stalkie_big_nohaplotig	exon	37862597	37863118	100	-	.	Parent=comp158311_c0_seq1.mrna1;Target=comp158311_c0_seq1 80 601 +
ChrX	stalkie_big_nohaplotig	exon	37864997	37865075	100	-	.	Parent=comp158311_c0_seq1.mrna1;Target=comp158311_c0_seq1 1 79 +
ChrX	stalkie_big_nohaplotig	CDS	37856732	37856866	.	-	0	Parent=comp158311_c0_seq1.mrna1;Target=comp158311_c0_seq1 842 976 +
ChrX	stalkie_big_nohaplotig	CDS	37860860	37861099	.	-	0	Parent=comp158311_c0_seq1.mrna1;Target=comp158311_c0_seq1 602 841 +
ChrX	stalkie_big_nohaplotig	CDS	37862597	37863118	.	-	0	Parent=comp158311_c0_seq1.mrna1;Target=comp158311_c0_seq1 80 601 +
ChrX	stalkie_big_nohaplotig	CDS	37864997	37865074	.	-	0	Parent=comp158311_c0_seq1.mrna1;Target=comp158311_c0_seq1 2 79 +
ChrX	stalkie_big_nohaplotig	mRNA	37860729	37865074	.	-	.	ID=ORF1880.mrna1;geneID=ORF1880.path1;Name=ORF1880;Dir=sensecoverage=100.0;identity=99.9;matches=970;mismatches=0;indels=1;unknowns=1;locus=RLOC_00002260
ChrX	stalkie_big_nohaplotig	exon	37860729	37861099	99	-	.	Parent=ORF1880.mrna1;Target=ORF1880 601 972 +
ChrX	stalkie_big_nohaplotig	exon	37862597	37863118	100	-	.	Parent=ORF1880.mrna1;Target=ORF1880 79 600 +
ChrX	stalkie_big_nohaplotig	exon	37864997	37865074	100	-	.	Parent=ORF1880.mrna1;Target=ORF1880 1 78 +
ChrX	stalkie_big_nohaplotig	CDS	37860729	37861099	.	-	0	Parent=ORF1880.mrna1;Target=ORF1880 601 972 +
ChrX	stalkie_big_nohaplotig	CDS	37862597	37863118	.	-	0	Parent=ORF1880.mrna1;Target=ORF1880 79 600 +
ChrX	stalkie_big_nohaplotig	CDS	37864997	37865074	.	-	0	Parent=ORF1880.mrna1;Target=ORF1880 1 78 +
ChrX	gffcl	locus	37876369	37881960	.	+	.	ID=RLOC_00002261;geneIDs=ORF1050.path1;transcripts=ORF1050.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37876369	37881960	.	+	.	ID=ORF1050.mrna1;geneID=ORF1050.path1;Name=ORF1050;Dir=sensecoverage=100.0;identity=99.8;matches=1261;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002261
ChrX	stalkie_big_nohaplotig	exon	37876369	37876380	100	+	.	Parent=ORF1050.mrna1;Target=ORF1050 1 12 +
ChrX	stalkie_big_nohaplotig	exon	37877839	37878054	100	+	.	Parent=ORF1050.mrna1;Target=ORF1050 13 228 +
ChrX	stalkie_big_nohaplotig	exon	37879711	37880112	100	+	.	Parent=ORF1050.mrna1;Target=ORF1050 229 630 +
ChrX	stalkie_big_nohaplotig	exon	37881328	37881960	99	+	.	Parent=ORF1050.mrna1;Target=ORF1050 631 1263 +
ChrX	stalkie_big_nohaplotig	CDS	37876369	37876380	.	+	0	Parent=ORF1050.mrna1;Target=ORF1050 1 12 +
ChrX	stalkie_big_nohaplotig	CDS	37877839	37878054	.	+	0	Parent=ORF1050.mrna1;Target=ORF1050 13 228 +
ChrX	stalkie_big_nohaplotig	CDS	37879711	37880112	.	+	0	Parent=ORF1050.mrna1;Target=ORF1050 229 630 +
ChrX	stalkie_big_nohaplotig	CDS	37881328	37881960	.	+	0	Parent=ORF1050.mrna1;Target=ORF1050 631 1263 +
ChrX	gffcl	locus	37885930	37897552	.	-	.	ID=RLOC_00002262;geneIDs=FBgn0032350.1.path1;transcripts=FBgn0032350.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37885930	37897552	.	-	.	ID=FBgn0032350.1.mrna1;geneID=FBgn0032350.1.path1;Name=FBgn0032350.1;Dir=sensecoverage=100.0;identity=100.0;matches=999;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002262
ChrX	stalkie_big_nohaplotig	exon	37885930	37886282	100	-	.	Parent=FBgn0032350.1.mrna1;Target=FBgn0032350.1 647 999 +
ChrX	stalkie_big_nohaplotig	exon	37887573	37887705	100	-	.	Parent=FBgn0032350.1.mrna1;Target=FBgn0032350.1 514 646 +
ChrX	stalkie_big_nohaplotig	exon	37887776	37887995	100	-	.	Parent=FBgn0032350.1.mrna1;Target=FBgn0032350.1 294 513 +
ChrX	stalkie_big_nohaplotig	exon	37888414	37888568	100	-	.	Parent=FBgn0032350.1.mrna1;Target=FBgn0032350.1 139 293 +
ChrX	stalkie_big_nohaplotig	exon	37894574	37894624	100	-	.	Parent=FBgn0032350.1.mrna1;Target=FBgn0032350.1 88 138 +
ChrX	stalkie_big_nohaplotig	exon	37897466	37897552	100	-	.	Parent=FBgn0032350.1.mrna1;Target=FBgn0032350.1 1 87 +
ChrX	stalkie_big_nohaplotig	CDS	37885930	37886282	.	-	2	Parent=FBgn0032350.1.mrna1;Target=FBgn0032350.1 647 999 +
ChrX	stalkie_big_nohaplotig	CDS	37887573	37887705	.	-	0	Parent=FBgn0032350.1.mrna1;Target=FBgn0032350.1 514 646 +
ChrX	stalkie_big_nohaplotig	CDS	37887776	37887995	.	-	1	Parent=FBgn0032350.1.mrna1;Target=FBgn0032350.1 294 513 +
ChrX	stalkie_big_nohaplotig	CDS	37888414	37888568	.	-	0	Parent=FBgn0032350.1.mrna1;Target=FBgn0032350.1 139 293 +
ChrX	stalkie_big_nohaplotig	CDS	37894574	37894624	.	-	0	Parent=FBgn0032350.1.mrna1;Target=FBgn0032350.1 88 138 +
ChrX	stalkie_big_nohaplotig	CDS	37897466	37897552	.	-	0	Parent=FBgn0032350.1.mrna1;Target=FBgn0032350.1 1 87 +
ChrX	gffcl	locus	37886449	37887201	.	+	.	ID=RLOC_00002263;geneIDs=comp151473_c4_seq1.path2;transcripts=comp151473_c4_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	37886449	37887201	.	+	.	ID=comp151473_c4_seq1.mrna2;geneID=comp151473_c4_seq1.path2;Name=comp151473_c4_seq1;Dir=indeterminatecoverage=76.4;identity=99.9;matches=752;mismatches=1;indels=0;unknowns=0;Target=comp151473_c4_seq1 986 234 .;CDS_Target=comp151473_c4_seq1 437 333 .;locus=RLOC_00002263
ChrX	stalkie_big_nohaplotig	exon	37886449	37887201	99	+	.	Parent=comp151473_c4_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	37886548	37886652	.	+	0	Parent=comp151473_c4_seq1.mrna2
ChrX	gffcl	locus	37902417	37907638	.	.	.	ID=RLOC_00002264;geneIDs=comp150488_c0_seq1.path1,comp159443_c10_seq1.path1;transcripts=comp159443_c10_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37902716	37907638	.	-	.	ID=comp159443_c10_seq1.mrna1;geneID=comp159443_c10_seq1.path1;Name=comp159443_c10_seq1;Dir=antisensecoverage=97.7;identity=97.9;matches=1127;mismatches=22;indels=2;unknowns=0;Target=comp159443_c10_seq1 1066 1176 .;locus=RLOC_00002264
ChrX	stalkie_big_nohaplotig	exon	37902716	37903291	95	-	.	Parent=comp159443_c10_seq1.mrna1;Target=comp159443_c10_seq1 28 605 -
ChrX	stalkie_big_nohaplotig	exon	37903350	37903646	100	-	.	Parent=comp159443_c10_seq1.mrna1;Target=comp159443_c10_seq1 606 902 -
ChrX	stalkie_big_nohaplotig	exon	37907363	37907638	100	-	.	Parent=comp159443_c10_seq1.mrna1;Target=comp159443_c10_seq1 903 1178 -
ChrX	stalkie_big_nohaplotig	CDS	37907526	37907636	.	-	0	Parent=comp159443_c10_seq1.mrna1
ChrX	gffcl	locus	37909034	37910451	.	+	.	ID=RLOC_00002265;geneIDs=FBgn0036266.2.path1;transcripts=FBgn0036266.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37909034	37910451	.	+	.	ID=FBgn0036266.2.mrna1;geneID=FBgn0036266.2.path1;Name=FBgn0036266.2;Dir=sensecoverage=100.0;identity=99.8;matches=1174;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002265
ChrX	stalkie_big_nohaplotig	exon	37909034	37909113	100	+	.	Parent=FBgn0036266.2.mrna1;Target=FBgn0036266.2 1 80 +
ChrX	stalkie_big_nohaplotig	exon	37909169	37909290	99	+	.	Parent=FBgn0036266.2.mrna1;Target=FBgn0036266.2 81 202 +
ChrX	stalkie_big_nohaplotig	exon	37909423	37909607	100	+	.	Parent=FBgn0036266.2.mrna1;Target=FBgn0036266.2 203 387 +
ChrX	stalkie_big_nohaplotig	exon	37909663	37910451	99	+	.	Parent=FBgn0036266.2.mrna1;Target=FBgn0036266.2 388 1176 +
ChrX	stalkie_big_nohaplotig	CDS	37909034	37909113	.	+	0	Parent=FBgn0036266.2.mrna1;Target=FBgn0036266.2 1 80 +
ChrX	stalkie_big_nohaplotig	CDS	37909169	37909290	.	+	1	Parent=FBgn0036266.2.mrna1;Target=FBgn0036266.2 81 202 +
ChrX	stalkie_big_nohaplotig	CDS	37909423	37909607	.	+	2	Parent=FBgn0036266.2.mrna1;Target=FBgn0036266.2 203 387 +
ChrX	stalkie_big_nohaplotig	CDS	37909663	37910451	.	+	0	Parent=FBgn0036266.2.mrna1;Target=FBgn0036266.2 388 1176 +
ChrX	gffcl	locus	37915364	37935490	.	+	.	ID=RLOC_00002266;geneIDs=FBgn0040232.1.path1;transcripts=FBgn0040232.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37915364	37935490	.	+	.	ID=FBgn0040232.1.mrna1;geneID=FBgn0040232.1.path1;Name=FBgn0040232.1;Dir=sensecoverage=100.0;identity=99.7;matches=7601;mismatches=25;indels=0;unknowns=0;locus=RLOC_00002266
ChrX	stalkie_big_nohaplotig	exon	37915364	37915514	100	+	.	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 1 151 +
ChrX	stalkie_big_nohaplotig	exon	37918090	37918212	100	+	.	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 152 274 +
ChrX	stalkie_big_nohaplotig	exon	37918282	37918393	100	+	.	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 275 386 +
ChrX	stalkie_big_nohaplotig	exon	37918461	37918695	100	+	.	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 387 621 +
ChrX	stalkie_big_nohaplotig	exon	37920013	37920335	99	+	.	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 622 944 +
ChrX	stalkie_big_nohaplotig	exon	37920404	37920958	99	+	.	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 945 1499 +
ChrX	stalkie_big_nohaplotig	exon	37921223	37921438	100	+	.	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 1500 1715 +
ChrX	stalkie_big_nohaplotig	exon	37926849	37927963	99	+	.	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 1716 2830 +
ChrX	stalkie_big_nohaplotig	exon	37928028	37931719	99	+	.	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 2831 6522 +
ChrX	stalkie_big_nohaplotig	exon	37932978	37933217	100	+	.	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 6523 6762 +
ChrX	stalkie_big_nohaplotig	exon	37934249	37934411	99	+	.	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 6763 6925 +
ChrX	stalkie_big_nohaplotig	exon	37934720	37935294	99	+	.	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 6926 7500 +
ChrX	stalkie_big_nohaplotig	exon	37935365	37935490	100	+	.	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 7501 7626 +
ChrX	stalkie_big_nohaplotig	CDS	37915364	37915514	.	+	0	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 1 151 +
ChrX	stalkie_big_nohaplotig	CDS	37918090	37918212	.	+	2	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 152 274 +
ChrX	stalkie_big_nohaplotig	CDS	37918282	37918393	.	+	2	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 275 386 +
ChrX	stalkie_big_nohaplotig	CDS	37918461	37918695	.	+	1	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 387 621 +
ChrX	stalkie_big_nohaplotig	CDS	37920013	37920335	.	+	0	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 622 944 +
ChrX	stalkie_big_nohaplotig	CDS	37920404	37920958	.	+	1	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 945 1499 +
ChrX	stalkie_big_nohaplotig	CDS	37921223	37921438	.	+	1	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 1500 1715 +
ChrX	stalkie_big_nohaplotig	CDS	37926849	37927963	.	+	1	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 1716 2830 +
ChrX	stalkie_big_nohaplotig	CDS	37928028	37931719	.	+	2	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 2831 6522 +
ChrX	stalkie_big_nohaplotig	CDS	37932978	37933217	.	+	0	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 6523 6762 +
ChrX	stalkie_big_nohaplotig	CDS	37934249	37934411	.	+	0	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 6763 6925 +
ChrX	stalkie_big_nohaplotig	CDS	37934720	37935294	.	+	2	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 6926 7500 +
ChrX	stalkie_big_nohaplotig	CDS	37935365	37935490	.	+	0	Parent=FBgn0040232.1.mrna1;Target=FBgn0040232.1 7501 7626 +
ChrX	gffcl	locus	37936386	37936689	.	-	.	ID=RLOC_00002267;geneIDs=comp118490_c0_seq1.path1;transcripts=comp118490_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37936386	37936689	.	-	.	ID=comp118490_c0_seq1.mrna1;geneID=comp118490_c0_seq1.path1;Name=comp118490_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=304;mismatches=0;indels=0;unknowns=0;Target=comp118490_c0_seq1 304 1 .;CDS_Target=comp118490_c0_seq1 105 1 .;locus=RLOC_00002267
ChrX	stalkie_big_nohaplotig	exon	37936386	37936689	100	-	.	Parent=comp118490_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37936585	37936689	.	-	0	Parent=comp118490_c0_seq1.mrna1
ChrX	gffcl	locus	37937782	37938025	.	-	.	ID=RLOC_00002268;geneIDs=comp117838_c0_seq1.path1;transcripts=comp117838_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37937782	37938025	.	-	.	ID=comp117838_c0_seq1.mrna1;geneID=comp117838_c0_seq1.path1;Name=comp117838_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.3;matches=236;mismatches=8;indels=1;unknowns=0;Target=comp117838_c0_seq1 245 1 .;CDS_Target=comp117838_c0_seq1 33 1 .;locus=RLOC_00002268
ChrX	stalkie_big_nohaplotig	exon	37937782	37938025	96	-	.	Parent=comp117838_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37937994	37938025	.	-	0	Parent=comp117838_c0_seq1.mrna1
ChrX	gffcl	locus	37938814	37946704	.	+	.	ID=RLOC_00002269;geneIDs=comp163674_c1_seq1.path1;transcripts=comp163674_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37938814	37946704	.	+	.	ID=comp163674_c1_seq1.mrna1;geneID=comp163674_c1_seq1.path1;Name=comp163674_c1_seq1;Dir=antisensecoverage=98.5;identity=98.6;matches=4845;mismatches=20;indels=48;unknowns=0;locus=RLOC_00002269
ChrX	stalkie_big_nohaplotig	exon	37938814	37940027	95	+	.	Parent=comp163674_c1_seq1.mrna1;Target=comp163674_c1_seq1 3653 4914 -
ChrX	stalkie_big_nohaplotig	exon	37940188	37940844	100	+	.	Parent=comp163674_c1_seq1.mrna1;Target=comp163674_c1_seq1 2996 3652 -
ChrX	stalkie_big_nohaplotig	exon	37941934	37944494	99	+	.	Parent=comp163674_c1_seq1.mrna1;Target=comp163674_c1_seq1 435 2995 -
ChrX	stalkie_big_nohaplotig	exon	37944556	37944699	98	+	.	Parent=comp163674_c1_seq1.mrna1;Target=comp163674_c1_seq1 291 434 -
ChrX	stalkie_big_nohaplotig	exon	37946416	37946704	99	+	.	Parent=comp163674_c1_seq1.mrna1;Target=comp163674_c1_seq1 2 290 -
ChrX	stalkie_big_nohaplotig	CDS	37938815	37940027	.	+	0	Parent=comp163674_c1_seq1.mrna1;Target=comp163674_c1_seq1 3653 4913 .
ChrX	stalkie_big_nohaplotig	CDS	37940188	37940844	.	+	2	Parent=comp163674_c1_seq1.mrna1;Target=comp163674_c1_seq1 2996 3652 .
ChrX	stalkie_big_nohaplotig	CDS	37941934	37944494	.	+	2	Parent=comp163674_c1_seq1.mrna1;Target=comp163674_c1_seq1 435 2995 .
ChrX	stalkie_big_nohaplotig	CDS	37944556	37944699	.	+	0	Parent=comp163674_c1_seq1.mrna1;Target=comp163674_c1_seq1 291 434 .
ChrX	stalkie_big_nohaplotig	CDS	37946416	37946529	.	+	0	Parent=comp163674_c1_seq1.mrna1;Target=comp163674_c1_seq1 177 290 .
ChrX	gffcl	locus	37953698	37954213	.	-	.	ID=RLOC_00002270;geneIDs=comp789990_c0_seq1.path1;transcripts=comp789990_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37953698	37954213	.	-	.	ID=comp789990_c0_seq1.mrna1;geneID=comp789990_c0_seq1.path1;Name=comp789990_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=515;mismatches=1;indels=0;unknowns=0;Target=comp789990_c0_seq1 516 1 .;CDS_Target=comp789990_c0_seq1 504 361 .;locus=RLOC_00002270
ChrX	stalkie_big_nohaplotig	exon	37953698	37954213	99	-	.	Parent=comp789990_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37953710	37953853	.	-	0	Parent=comp789990_c0_seq1.mrna1
ChrX	gffcl	locus	37955415	37956152	.	-	.	ID=RLOC_00002271;geneIDs=comp147889_c1_seq1.path1;transcripts=comp147889_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37955415	37956152	.	-	.	ID=comp147889_c1_seq1.mrna1;geneID=comp147889_c1_seq1.path1;Name=comp147889_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=735;mismatches=3;indels=2;unknowns=0;Target=comp147889_c1_seq1 740 1 .;CDS_Target=comp147889_c1_seq1 266 189 .;locus=RLOC_00002271
ChrX	stalkie_big_nohaplotig	exon	37955415	37956152	99	-	.	Parent=comp147889_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37955889	37955966	.	-	0	Parent=comp147889_c1_seq1.mrna1
ChrX	gffcl	locus	37956329	37956586	.	-	.	ID=RLOC_00002272;geneIDs=comp477777_c0_seq1.path1;transcripts=comp477777_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37956329	37956586	.	-	.	ID=comp477777_c0_seq1.mrna1;geneID=comp477777_c0_seq1.path1;Name=comp477777_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.2;matches=256;mismatches=2;indels=0;unknowns=0;Target=comp477777_c0_seq1 260 3 .;CDS_Target=comp477777_c0_seq1 10 5 .;locus=RLOC_00002272
ChrX	stalkie_big_nohaplotig	exon	37956329	37956586	99	-	.	Parent=comp477777_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37956579	37956584	.	-	0	Parent=comp477777_c0_seq1.mrna1
ChrX	gffcl	locus	37957577	38030887	.	-	.	ID=RLOC_00002273;geneIDs=FBgn0264442.1.path1;transcripts=FBgn0264442.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37957577	38030887	.	-	.	ID=FBgn0264442.1.mrna1;geneID=FBgn0264442.1.path1;Name=FBgn0264442.1;Dir=sensecoverage=100.0;identity=99.8;matches=1911;mismatches=0;indels=3;unknowns=0;locus=RLOC_00002273
ChrX	stalkie_big_nohaplotig	exon	37957577	37958025	100	-	.	Parent=FBgn0264442.1.mrna1;Target=FBgn0264442.1 1463 1911 +
ChrX	stalkie_big_nohaplotig	exon	37959003	37959701	100	-	.	Parent=FBgn0264442.1.mrna1;Target=FBgn0264442.1 764 1462 +
ChrX	stalkie_big_nohaplotig	exon	38029850	38030081	100	-	.	Parent=FBgn0264442.1.mrna1;Target=FBgn0264442.1 532 763 +
ChrX	stalkie_big_nohaplotig	exon	38030215	38030520	100	-	.	Parent=FBgn0264442.1.mrna1;Target=FBgn0264442.1 226 531 +
ChrX	stalkie_big_nohaplotig	exon	38030660	38030887	98	-	.	Parent=FBgn0264442.1.mrna1;Target=FBgn0264442.1 1 225 +
ChrX	stalkie_big_nohaplotig	CDS	37957577	37958025	.	-	2	Parent=FBgn0264442.1.mrna1;Target=FBgn0264442.1 1463 1911 +
ChrX	stalkie_big_nohaplotig	CDS	37959003	37959701	.	-	2	Parent=FBgn0264442.1.mrna1;Target=FBgn0264442.1 764 1462 +
ChrX	stalkie_big_nohaplotig	CDS	38029850	38030081	.	-	0	Parent=FBgn0264442.1.mrna1;Target=FBgn0264442.1 532 763 +
ChrX	stalkie_big_nohaplotig	CDS	38030215	38030520	.	-	0	Parent=FBgn0264442.1.mrna1;Target=FBgn0264442.1 226 531 +
ChrX	stalkie_big_nohaplotig	CDS	38030660	38030887	.	-	0	Parent=FBgn0264442.1.mrna1;Target=FBgn0264442.1 1 225 +
ChrX	gffcl	locus	37959808	39497342	.	+	.	ID=RLOC_00002274;geneIDs=comp118275_c1_seq1.path1;transcripts=comp118275_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37959808	39497342	.	+	.	ID=comp118275_c1_seq1.mrna1;geneID=comp118275_c1_seq1.path1;Name=comp118275_c1_seq1;Dir=indeterminatecoverage=66.0;identity=100.0;matches=192;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002274
ChrX	stalkie_big_nohaplotig	exon	37959808	37959976	100	+	.	Parent=comp118275_c1_seq1.mrna1;Target=comp118275_c1_seq1 201 33 .
ChrX	stalkie_big_nohaplotig	exon	39462999	39463001	100	+	.	Parent=comp118275_c1_seq1.mrna1;Target=comp118275_c1_seq1 204 202 .
ChrX	stalkie_big_nohaplotig	exon	39470755	39470760	100	+	.	Parent=comp118275_c1_seq1.mrna1;Target=comp118275_c1_seq1 210 205 .
ChrX	stalkie_big_nohaplotig	exon	39478837	39478840	100	+	.	Parent=comp118275_c1_seq1.mrna1;Target=comp118275_c1_seq1 214 211 .
ChrX	stalkie_big_nohaplotig	exon	39486982	39486984	100	+	.	Parent=comp118275_c1_seq1.mrna1;Target=comp118275_c1_seq1 217 215 .
ChrX	stalkie_big_nohaplotig	exon	39493557	39493558	100	+	.	Parent=comp118275_c1_seq1.mrna1;Target=comp118275_c1_seq1 219 218 .
ChrX	stalkie_big_nohaplotig	exon	39497338	39497342	100	+	.	Parent=comp118275_c1_seq1.mrna1;Target=comp118275_c1_seq1 224 220 .
ChrX	stalkie_big_nohaplotig	CDS	37959809	37959976	.	+	0	Parent=comp118275_c1_seq1.mrna1;Target=comp118275_c1_seq1 201 34 .
ChrX	stalkie_big_nohaplotig	CDS	39462999	39463001	.	+	0	Parent=comp118275_c1_seq1.mrna1;Target=comp118275_c1_seq1 204 202 .
ChrX	stalkie_big_nohaplotig	CDS	39470755	39470760	.	+	0	Parent=comp118275_c1_seq1.mrna1;Target=comp118275_c1_seq1 210 205 .
ChrX	stalkie_big_nohaplotig	CDS	39478837	39478840	.	+	0	Parent=comp118275_c1_seq1.mrna1;Target=comp118275_c1_seq1 214 211 .
ChrX	stalkie_big_nohaplotig	CDS	39486982	39486984	.	+	2	Parent=comp118275_c1_seq1.mrna1;Target=comp118275_c1_seq1 217 215 .
ChrX	stalkie_big_nohaplotig	CDS	39493557	39493558	.	+	2	Parent=comp118275_c1_seq1.mrna1;Target=comp118275_c1_seq1 219 218 .
ChrX	stalkie_big_nohaplotig	CDS	39497338	39497340	.	+	0	Parent=comp118275_c1_seq1.mrna1;Target=comp118275_c1_seq1 222 220 .
ChrX	gffcl	locus	37960790	37961231	.	-	.	ID=RLOC_00002275;geneIDs=comp152112_c0_seq1.path1;transcripts=comp152112_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37960790	37961231	.	-	.	ID=comp152112_c0_seq1.mrna1;geneID=comp152112_c0_seq1.path1;Name=comp152112_c0_seq1;Dir=indeterminatecoverage=95.5;identity=96.2;matches=425;mismatches=2;indels=15;unknowns=0;Target=comp152112_c0_seq1 447 21 .;CDS_Target=comp152112_c0_seq1 447 370 .;locus=RLOC_00002275
ChrX	stalkie_big_nohaplotig	exon	37960790	37961231	96	-	.	Parent=comp152112_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	37960790	37960867	.	-	0	Parent=comp152112_c0_seq1.mrna1
ChrX	gffcl	locus	37961884	38067362	.	-	.	ID=RLOC_00002276;geneIDs=comp157018_c0_seq1.path1;transcripts=comp157018_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	37961884	38067362	.	-	.	ID=comp157018_c0_seq1.mrna1;geneID=comp157018_c0_seq1.path1;Name=comp157018_c0_seq1;Dir=sensecoverage=97.1;identity=98.5;matches=637;mismatches=10;indels=0;unknowns=0;Target=comp157018_c0_seq1 204 302 +;locus=RLOC_00002276
ChrX	stalkie_big_nohaplotig	exon	37961884	37962514	98	-	.	Parent=comp157018_c0_seq1.mrna1;Target=comp157018_c0_seq1 36 666 +
ChrX	stalkie_big_nohaplotig	exon	38065942	38065944	100	-	.	Parent=comp157018_c0_seq1.mrna1;Target=comp157018_c0_seq1 33 35 +
ChrX	stalkie_big_nohaplotig	exon	38067350	38067362	100	-	.	Parent=comp157018_c0_seq1.mrna1;Target=comp157018_c0_seq1 20 32 +
ChrX	stalkie_big_nohaplotig	CDS	37962248	37962346	.	-	0	Parent=comp157018_c0_seq1.mrna1
ChrX	gffcl	locus	38031747	38103874	.	-	.	ID=RLOC_00002277;geneIDs=comp115902_c0_seq1.path1;transcripts=comp115902_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38031747	38103874	.	-	.	ID=comp115902_c0_seq1.mrna1;geneID=comp115902_c0_seq1.path1;Name=comp115902_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=454;mismatches=0;indels=0;unknowns=0;Target=comp115902_c0_seq1 3 77 +;locus=RLOC_00002277
ChrX	stalkie_big_nohaplotig	exon	38031747	38032036	100	-	.	Parent=comp115902_c0_seq1.mrna1;Target=comp115902_c0_seq1 165 454 +
ChrX	stalkie_big_nohaplotig	exon	38066504	38066569	100	-	.	Parent=comp115902_c0_seq1.mrna1;Target=comp115902_c0_seq1 99 164 +
ChrX	stalkie_big_nohaplotig	exon	38103777	38103874	100	-	.	Parent=comp115902_c0_seq1.mrna1;Target=comp115902_c0_seq1 1 98 +
ChrX	stalkie_big_nohaplotig	CDS	38103798	38103872	.	-	0	Parent=comp115902_c0_seq1.mrna1
ChrX	gffcl	locus	38151779	38152226	.	+	.	ID=RLOC_00002278;geneIDs=comp135528_c1_seq1.path1;transcripts=comp135528_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38151779	38152226	.	+	.	ID=comp135528_c1_seq1.mrna1;geneID=comp135528_c1_seq1.path1;Name=comp135528_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=448;mismatches=0;indels=0;unknowns=0;Target=comp135528_c1_seq1 448 1 .;CDS_Target=comp135528_c1_seq1 122 3 .;locus=RLOC_00002278
ChrX	stalkie_big_nohaplotig	exon	38151779	38152226	100	+	.	Parent=comp135528_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	38151781	38151900	.	+	0	Parent=comp135528_c1_seq1.mrna1
ChrX	gffcl	locus	38252293	38252721	.	-	.	ID=RLOC_00002279;geneIDs=comp4528_c1_seq1.path1;transcripts=comp4528_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38252293	38252721	.	-	.	ID=comp4528_c1_seq1.mrna1;geneID=comp4528_c1_seq1.path1;Name=comp4528_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=427;mismatches=2;indels=0;unknowns=0;Target=comp4528_c1_seq1 429 1 .;CDS_Target=comp4528_c1_seq1 118 2 .;locus=RLOC_00002279
ChrX	stalkie_big_nohaplotig	exon	38252293	38252721	99	-	.	Parent=comp4528_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	38252604	38252720	.	-	0	Parent=comp4528_c1_seq1.mrna1
ChrX	gffcl	locus	38347891	38348819	.	-	.	ID=RLOC_00002280;geneIDs=comp144324_c0_seq1.path1;transcripts=comp144324_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38347891	38348819	.	-	.	ID=comp144324_c0_seq1.mrna1;geneID=comp144324_c0_seq1.path1;Name=comp144324_c0_seq1;Dir=sensecoverage=99.6;identity=99.9;matches=798;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002280
ChrX	stalkie_big_nohaplotig	exon	38347891	38348101	100	-	.	Parent=comp144324_c0_seq1.mrna1;Target=comp144324_c0_seq1 590 800 +
ChrX	stalkie_big_nohaplotig	exon	38348161	38348409	100	-	.	Parent=comp144324_c0_seq1.mrna1;Target=comp144324_c0_seq1 341 589 +
ChrX	stalkie_big_nohaplotig	exon	38348481	38348819	99	-	.	Parent=comp144324_c0_seq1.mrna1;Target=comp144324_c0_seq1 2 340 +
ChrX	stalkie_big_nohaplotig	CDS	38348017	38348101	.	-	1	Parent=comp144324_c0_seq1.mrna1;Target=comp144324_c0_seq1 590 674 +
ChrX	stalkie_big_nohaplotig	CDS	38348161	38348409	.	-	1	Parent=comp144324_c0_seq1.mrna1;Target=comp144324_c0_seq1 341 589 +
ChrX	stalkie_big_nohaplotig	CDS	38348481	38348710	.	-	0	Parent=comp144324_c0_seq1.mrna1;Target=comp144324_c0_seq1 111 340 +
ChrX	gffcl	locus	38362721	38363491	.	+	.	ID=RLOC_00002281;geneIDs=comp149012_c0_seq1.path1;transcripts=comp149012_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38362721	38363491	.	+	.	ID=comp149012_c0_seq1.mrna1;geneID=comp149012_c0_seq1.path1;Name=comp149012_c0_seq1;Dir=sensecoverage=99.8;identity=99.7;matches=650;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002281
ChrX	stalkie_big_nohaplotig	exon	38362721	38363101	99	+	.	Parent=comp149012_c0_seq1.mrna1;Target=comp149012_c0_seq1 2 382 +
ChrX	stalkie_big_nohaplotig	exon	38363159	38363235	100	+	.	Parent=comp149012_c0_seq1.mrna1;Target=comp149012_c0_seq1 383 459 +
ChrX	stalkie_big_nohaplotig	exon	38363298	38363491	100	+	.	Parent=comp149012_c0_seq1.mrna1;Target=comp149012_c0_seq1 460 653 +
ChrX	stalkie_big_nohaplotig	CDS	38362818	38363101	.	+	0	Parent=comp149012_c0_seq1.mrna1;Target=comp149012_c0_seq1 99 382 +
ChrX	stalkie_big_nohaplotig	CDS	38363159	38363235	.	+	1	Parent=comp149012_c0_seq1.mrna1;Target=comp149012_c0_seq1 383 459 +
ChrX	stalkie_big_nohaplotig	CDS	38363298	38363344	.	+	2	Parent=comp149012_c0_seq1.mrna1;Target=comp149012_c0_seq1 460 506 +
ChrX	gffcl	locus	38374851	38455294	.	-	.	ID=RLOC_00002282;geneIDs=comp132665_c0_seq1.path1,comp158102_c0_seq1.path1;transcripts=comp158102_c0_seq1.mrna1,comp132665_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38374851	38455294	.	-	.	ID=comp158102_c0_seq1.mrna1;geneID=comp158102_c0_seq1.path1;Name=comp158102_c0_seq1;Dir=indeterminatecoverage=69.2;identity=92.9;matches=1144;mismatches=12;indels=76;unknowns=0;Target=comp158102_c0_seq1 164 3 .;locus=RLOC_00002282
ChrX	stalkie_big_nohaplotig	exon	38374851	38374862	100	-	.	Parent=comp158102_c0_seq1.mrna1;Target=comp158102_c0_seq1 1265 1254 .
ChrX	stalkie_big_nohaplotig	exon	38381967	38381970	100	-	.	Parent=comp158102_c0_seq1.mrna1;Target=comp158102_c0_seq1 1253 1250 .
ChrX	stalkie_big_nohaplotig	exon	38389620	38389637	55	-	.	Parent=comp158102_c0_seq1.mrna1;Target=comp158102_c0_seq1 1249 1240 .
ChrX	stalkie_big_nohaplotig	exon	38396230	38396245	81	-	.	Parent=comp158102_c0_seq1.mrna1;Target=comp158102_c0_seq1 1217 1202 .
ChrX	stalkie_big_nohaplotig	exon	38396986	38396992	100	-	.	Parent=comp158102_c0_seq1.mrna1;Target=comp158102_c0_seq1 1201 1195 .
ChrX	stalkie_big_nohaplotig	exon	38401442	38401445	100	-	.	Parent=comp158102_c0_seq1.mrna1;Target=comp158102_c0_seq1 1194 1191 .
ChrX	stalkie_big_nohaplotig	exon	38403341	38403344	100	-	.	Parent=comp158102_c0_seq1.mrna1;Target=comp158102_c0_seq1 1190 1187 .
ChrX	stalkie_big_nohaplotig	exon	38403452	38403461	80	-	.	Parent=comp158102_c0_seq1.mrna1;Target=comp158102_c0_seq1 1186 1178 .
ChrX	stalkie_big_nohaplotig	exon	38403646	38403681	54	-	.	Parent=comp158102_c0_seq1.mrna1;Target=comp158102_c0_seq1 1177 1127 .
ChrX	stalkie_big_nohaplotig	exon	38407118	38407128	100	-	.	Parent=comp158102_c0_seq1.mrna1;Target=comp158102_c0_seq1 1123 1113 .
ChrX	stalkie_big_nohaplotig	exon	38413155	38413162	100	-	.	Parent=comp158102_c0_seq1.mrna1;Target=comp158102_c0_seq1 1109 1102 .
ChrX	stalkie_big_nohaplotig	exon	38435459	38435463	100	-	.	Parent=comp158102_c0_seq1.mrna1;Target=comp158102_c0_seq1 1101 1097 .
ChrX	stalkie_big_nohaplotig	exon	38439443	38439453	100	-	.	Parent=comp158102_c0_seq1.mrna1;Target=comp158102_c0_seq1 1096 1086 .
ChrX	stalkie_big_nohaplotig	exon	38442769	38442770	100	-	.	Parent=comp158102_c0_seq1.mrna1;Target=comp158102_c0_seq1 1085 1084 .
ChrX	stalkie_big_nohaplotig	exon	38448997	38449005	100	-	.	Parent=comp158102_c0_seq1.mrna1;Target=comp158102_c0_seq1 1083 1075 .
ChrX	stalkie_big_nohaplotig	exon	38449651	38449663	20	-	.	Parent=comp158102_c0_seq1.mrna1;Target=comp158102_c0_seq1 1074 1010 .
ChrX	stalkie_big_nohaplotig	exon	38454301	38455294	100	-	.	Parent=comp158102_c0_seq1.mrna1;Target=comp158102_c0_seq1 994 1 .
ChrX	stalkie_big_nohaplotig	CDS	38455131	38455292	.	-	0	Parent=comp158102_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38378218	38403750	.	-	.	ID=comp132665_c0_seq1.mrna1;geneID=comp132665_c0_seq1.path1;Name=comp132665_c0_seq1;Dir=antisensecoverage=98.9;identity=100.0;matches=792;mismatches=0;indels=0;unknowns=0;Target=comp132665_c0_seq1 212 574 .;locus=RLOC_00002282
ChrX	stalkie_big_nohaplotig	exon	38378218	38378916	100	-	.	Parent=comp132665_c0_seq1.mrna1;Target=comp132665_c0_seq1 1 699 -
ChrX	stalkie_big_nohaplotig	exon	38403658	38403750	100	-	.	Parent=comp132665_c0_seq1.mrna1;Target=comp132665_c0_seq1 700 792 -
ChrX	stalkie_big_nohaplotig	CDS	38378429	38378791	.	-	0	Parent=comp132665_c0_seq1.mrna1
ChrX	gffcl	locus	38388310	38449469	.	+	.	ID=RLOC_00002283;geneIDs=FBgn0259822.1.path1,comp158986_c0_seq1.path1,comp1911660_c0_seq1.path1;transcripts=comp158986_c0_seq1.mrna1,FBgn0259822.1.mrna1,comp1911660_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38388310	38449469	.	+	.	ID=comp158986_c0_seq1.mrna1;geneID=comp158986_c0_seq1.path1;Name=comp158986_c0_seq1;Dir=antisensecoverage=99.3;identity=99.9;matches=3480;mismatches=0;indels=2;unknowns=0;locus=RLOC_00002283
ChrX	stalkie_big_nohaplotig	exon	38388310	38389030	100	+	.	Parent=comp158986_c0_seq1.mrna1;Target=comp158986_c0_seq1 2781 3501 -
ChrX	stalkie_big_nohaplotig	exon	38422860	38422976	100	+	.	Parent=comp158986_c0_seq1.mrna1;Target=comp158986_c0_seq1 2664 2780 -
ChrX	stalkie_big_nohaplotig	exon	38423098	38423319	100	+	.	Parent=comp158986_c0_seq1.mrna1;Target=comp158986_c0_seq1 2442 2663 -
ChrX	stalkie_big_nohaplotig	exon	38423390	38423501	100	+	.	Parent=comp158986_c0_seq1.mrna1;Target=comp158986_c0_seq1 2330 2441 -
ChrX	stalkie_big_nohaplotig	exon	38430703	38431202	100	+	.	Parent=comp158986_c0_seq1.mrna1;Target=comp158986_c0_seq1 1830 2329 -
ChrX	stalkie_big_nohaplotig	exon	38437345	38437512	99	+	.	Parent=comp158986_c0_seq1.mrna1;Target=comp158986_c0_seq1 1661 1829 -
ChrX	stalkie_big_nohaplotig	exon	38437586	38437703	100	+	.	Parent=comp158986_c0_seq1.mrna1;Target=comp158986_c0_seq1 1543 1660 -
ChrX	stalkie_big_nohaplotig	exon	38443061	38443348	100	+	.	Parent=comp158986_c0_seq1.mrna1;Target=comp158986_c0_seq1 1255 1542 -
ChrX	stalkie_big_nohaplotig	exon	38448236	38449469	99	+	.	Parent=comp158986_c0_seq1.mrna1;Target=comp158986_c0_seq1 20 1254 -
ChrX	stalkie_big_nohaplotig	CDS	38388959	38389030	.	+	0	Parent=comp158986_c0_seq1.mrna1;Target=comp158986_c0_seq1 2781 2852 .
ChrX	stalkie_big_nohaplotig	CDS	38422860	38422976	.	+	0	Parent=comp158986_c0_seq1.mrna1;Target=comp158986_c0_seq1 2664 2780 .
ChrX	stalkie_big_nohaplotig	CDS	38423098	38423319	.	+	0	Parent=comp158986_c0_seq1.mrna1;Target=comp158986_c0_seq1 2442 2663 .
ChrX	stalkie_big_nohaplotig	CDS	38423390	38423501	.	+	0	Parent=comp158986_c0_seq1.mrna1;Target=comp158986_c0_seq1 2330 2441 .
ChrX	stalkie_big_nohaplotig	CDS	38430703	38431202	.	+	2	Parent=comp158986_c0_seq1.mrna1;Target=comp158986_c0_seq1 1830 2329 .
ChrX	stalkie_big_nohaplotig	CDS	38437345	38437418	.	+	0	Parent=comp158986_c0_seq1.mrna1;Target=comp158986_c0_seq1 1755 1829 .
ChrX	stalkie_big_nohaplotig	mRNA	38407089	38448759	.	+	.	ID=FBgn0259822.1.mrna1;geneID=FBgn0259822.1.path1;Name=FBgn0259822.1;Dir=sensecoverage=100.0;identity=100.0;matches=1983;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002283
ChrX	stalkie_big_nohaplotig	exon	38407089	38407310	100	+	.	Parent=FBgn0259822.1.mrna1;Target=FBgn0259822.1 1 222 +
ChrX	stalkie_big_nohaplotig	exon	38422860	38422976	100	+	.	Parent=FBgn0259822.1.mrna1;Target=FBgn0259822.1 223 339 +
ChrX	stalkie_big_nohaplotig	exon	38423098	38423319	100	+	.	Parent=FBgn0259822.1.mrna1;Target=FBgn0259822.1 340 561 +
ChrX	stalkie_big_nohaplotig	exon	38423390	38423501	100	+	.	Parent=FBgn0259822.1.mrna1;Target=FBgn0259822.1 562 673 +
ChrX	stalkie_big_nohaplotig	exon	38430703	38431202	100	+	.	Parent=FBgn0259822.1.mrna1;Target=FBgn0259822.1 674 1173 +
ChrX	stalkie_big_nohaplotig	exon	38437345	38437512	100	+	.	Parent=FBgn0259822.1.mrna1;Target=FBgn0259822.1 1174 1341 +
ChrX	stalkie_big_nohaplotig	exon	38437586	38437703	100	+	.	Parent=FBgn0259822.1.mrna1;Target=FBgn0259822.1 1342 1459 +
ChrX	stalkie_big_nohaplotig	exon	38448236	38448759	100	+	.	Parent=FBgn0259822.1.mrna1;Target=FBgn0259822.1 1460 1983 +
ChrX	stalkie_big_nohaplotig	CDS	38407089	38407310	.	+	0	Parent=FBgn0259822.1.mrna1;Target=FBgn0259822.1 1 222 +
ChrX	stalkie_big_nohaplotig	CDS	38422860	38422976	.	+	0	Parent=FBgn0259822.1.mrna1;Target=FBgn0259822.1 223 339 +
ChrX	stalkie_big_nohaplotig	CDS	38423098	38423319	.	+	0	Parent=FBgn0259822.1.mrna1;Target=FBgn0259822.1 340 561 +
ChrX	stalkie_big_nohaplotig	CDS	38423390	38423501	.	+	0	Parent=FBgn0259822.1.mrna1;Target=FBgn0259822.1 562 673 +
ChrX	stalkie_big_nohaplotig	CDS	38430703	38431202	.	+	2	Parent=FBgn0259822.1.mrna1;Target=FBgn0259822.1 674 1173 +
ChrX	stalkie_big_nohaplotig	CDS	38437345	38437512	.	+	0	Parent=FBgn0259822.1.mrna1;Target=FBgn0259822.1 1174 1341 +
ChrX	stalkie_big_nohaplotig	CDS	38437586	38437703	.	+	0	Parent=FBgn0259822.1.mrna1;Target=FBgn0259822.1 1342 1459 +
ChrX	stalkie_big_nohaplotig	CDS	38448236	38448759	.	+	2	Parent=FBgn0259822.1.mrna1;Target=FBgn0259822.1 1460 1983 +
ChrX	stalkie_big_nohaplotig	mRNA	38407287	38407891	.	+	.	ID=comp1911660_c0_seq1.mrna1;geneID=comp1911660_c0_seq1.path1;Name=comp1911660_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=533;mismatches=0;indels=1;unknowns=0;locus=RLOC_00002283
ChrX	stalkie_big_nohaplotig	exon	38407287	38407310	100	+	.	Parent=comp1911660_c0_seq1.mrna1;Target=comp1911660_c0_seq1 1 24 +
ChrX	stalkie_big_nohaplotig	exon	38407383	38407891	99	+	.	Parent=comp1911660_c0_seq1.mrna1;Target=comp1911660_c0_seq1 25 534 +
ChrX	stalkie_big_nohaplotig	CDS	38407287	38407310	.	+	0	Parent=comp1911660_c0_seq1.mrna1;Target=comp1911660_c0_seq1 1 24 +
ChrX	stalkie_big_nohaplotig	CDS	38407383	38407538	.	+	0	Parent=comp1911660_c0_seq1.mrna1;Target=comp1911660_c0_seq1 25 180 +
ChrX	gffcl	locus	38407920	38408311	.	-	.	ID=RLOC_00002284;geneIDs=comp2115187_c0_seq1.path1;transcripts=comp2115187_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38407920	38408311	.	-	.	ID=comp2115187_c0_seq1.mrna1;geneID=comp2115187_c0_seq1.path1;Name=comp2115187_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=391;mismatches=1;indels=0;unknowns=0;Target=comp2115187_c0_seq1 392 1 .;CDS_Target=comp2115187_c0_seq1 106 2 .;locus=RLOC_00002284
ChrX	stalkie_big_nohaplotig	exon	38407920	38408311	99	-	.	Parent=comp2115187_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	38408206	38408310	.	-	0	Parent=comp2115187_c0_seq1.mrna1
ChrX	gffcl	locus	38432342	38435566	.	-	.	ID=RLOC_00002285;geneIDs=comp153257_c0_seq1.path1;transcripts=comp153257_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38432342	38435566	.	-	.	ID=comp153257_c0_seq1.mrna1;geneID=comp153257_c0_seq1.path1;Name=comp153257_c0_seq1;Dir=sensecoverage=98.9;identity=99.8;matches=1785;mismatches=0;indels=3;unknowns=0;locus=RLOC_00002285
ChrX	stalkie_big_nohaplotig	exon	38432342	38433891	99	-	.	Parent=comp153257_c0_seq1.mrna1;Target=comp153257_c0_seq1 237 1789 +
ChrX	stalkie_big_nohaplotig	exon	38433958	38434033	100	-	.	Parent=comp153257_c0_seq1.mrna1;Target=comp153257_c0_seq1 161 236 +
ChrX	stalkie_big_nohaplotig	exon	38435314	38435398	100	-	.	Parent=comp153257_c0_seq1.mrna1;Target=comp153257_c0_seq1 76 160 +
ChrX	stalkie_big_nohaplotig	exon	38435493	38435566	100	-	.	Parent=comp153257_c0_seq1.mrna1;Target=comp153257_c0_seq1 2 75 +
ChrX	stalkie_big_nohaplotig	CDS	38432554	38433891	.	-	0	Parent=comp153257_c0_seq1.mrna1;Target=comp153257_c0_seq1 237 1574 +
ChrX	stalkie_big_nohaplotig	CDS	38433958	38433966	.	-	0	Parent=comp153257_c0_seq1.mrna1;Target=comp153257_c0_seq1 228 236 +
ChrX	gffcl	locus	38450867	38451760	.	-	.	ID=RLOC_00002286;geneIDs=comp158450_c0_seq1.path1;transcripts=comp158450_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38450867	38451760	.	-	.	ID=comp158450_c0_seq1.mrna1;geneID=comp158450_c0_seq1.path1;Name=comp158450_c0_seq1;Dir=indeterminatecoverage=93.5;identity=100.0;matches=894;mismatches=0;indels=0;unknowns=0;Target=comp158450_c0_seq1 895 2 .;CDS_Target=comp158450_c0_seq1 321 250 .;locus=RLOC_00002286
ChrX	stalkie_big_nohaplotig	exon	38450867	38451760	100	-	.	Parent=comp158450_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	38451441	38451512	.	-	0	Parent=comp158450_c0_seq1.mrna1
ChrX	gffcl	locus	38452060	38453239	.	-	.	ID=RLOC_00002287;geneIDs=comp150307_c0_seq1.path1;transcripts=comp150307_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38452060	38453239	.	-	.	ID=comp150307_c0_seq1.mrna1;geneID=comp150307_c0_seq1.path1;Name=comp150307_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1180;mismatches=0;indels=0;unknowns=0;Target=comp150307_c0_seq1 1180 1 .;CDS_Target=comp150307_c0_seq1 92 3 .;locus=RLOC_00002287
ChrX	stalkie_big_nohaplotig	exon	38452060	38453239	100	-	.	Parent=comp150307_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	38453148	38453237	.	-	0	Parent=comp150307_c0_seq1.mrna1
ChrX	gffcl	locus	38457531	38458093	.	+	.	ID=RLOC_00002288;geneIDs=comp151121_c1_seq1.path1;transcripts=comp151121_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38457531	38458093	.	+	.	ID=comp151121_c1_seq1.mrna1;geneID=comp151121_c1_seq1.path1;Name=comp151121_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=560;mismatches=3;indels=0;unknowns=0;Target=comp151121_c1_seq1 563 1 .;CDS_Target=comp151121_c1_seq1 544 272 .;locus=RLOC_00002288
ChrX	stalkie_big_nohaplotig	exon	38457531	38458093	99	+	.	Parent=comp151121_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	38457802	38458074	.	+	0	Parent=comp151121_c1_seq1.mrna1
ChrX	gffcl	locus	38459180	38459668	.	+	.	ID=RLOC_00002289;geneIDs=comp118965_c0_seq1.path1;transcripts=comp118965_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38459180	38459668	.	+	.	ID=comp118965_c0_seq1.mrna1;geneID=comp118965_c0_seq1.path1;Name=comp118965_c0_seq1;Dir=indeterminatecoverage=96.4;identity=100.0;matches=489;mismatches=0;indels=0;unknowns=0;Target=comp118965_c0_seq1 507 19 .;CDS_Target=comp118965_c0_seq1 380 330 .;locus=RLOC_00002289
ChrX	stalkie_big_nohaplotig	exon	38459180	38459668	100	+	.	Parent=comp118965_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	38459491	38459541	.	+	0	Parent=comp118965_c0_seq1.mrna1
ChrX	gffcl	locus	38462164	38462896	.	+	.	ID=RLOC_00002290;geneIDs=comp154590_c0_seq1.path1;transcripts=comp154590_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38462164	38462896	.	+	.	ID=comp154590_c0_seq1.mrna1;geneID=comp154590_c0_seq1.path1;Name=comp154590_c0_seq1;Dir=sensecoverage=97.9;identity=99.5;matches=609;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002290
ChrX	stalkie_big_nohaplotig	exon	38462164	38462512	99	+	.	Parent=comp154590_c0_seq1.mrna1;Target=comp154590_c0_seq1 14 362 +
ChrX	stalkie_big_nohaplotig	exon	38462574	38462650	100	+	.	Parent=comp154590_c0_seq1.mrna1;Target=comp154590_c0_seq1 363 439 +
ChrX	stalkie_big_nohaplotig	exon	38462711	38462896	100	+	.	Parent=comp154590_c0_seq1.mrna1;Target=comp154590_c0_seq1 440 625 +
ChrX	stalkie_big_nohaplotig	CDS	38462244	38462512	.	+	0	Parent=comp154590_c0_seq1.mrna1;Target=comp154590_c0_seq1 94 362 +
ChrX	stalkie_big_nohaplotig	CDS	38462574	38462650	.	+	1	Parent=comp154590_c0_seq1.mrna1;Target=comp154590_c0_seq1 363 439 +
ChrX	stalkie_big_nohaplotig	CDS	38462711	38462745	.	+	2	Parent=comp154590_c0_seq1.mrna1;Target=comp154590_c0_seq1 440 474 +
ChrX	gffcl	locus	38465906	38466660	.	-	.	ID=RLOC_00002291;geneIDs=comp162927_c0_seq1.path1;transcripts=comp162927_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38465906	38466660	.	-	.	ID=comp162927_c0_seq1.mrna1;geneID=comp162927_c0_seq1.path1;Name=comp162927_c0_seq1;Dir=sensecoverage=91.1;identity=88.0;matches=572;mismatches=67;indels=11;unknowns=0;Target=comp162927_c0_seq1 2 16 +;locus=RLOC_00002291
ChrX	stalkie_big_nohaplotig	exon	38465906	38466053	90	-	.	Parent=comp162927_c0_seq1.mrna1;Target=comp162927_c0_seq1 499 646 +
ChrX	stalkie_big_nohaplotig	exon	38466110	38466178	83	-	.	Parent=comp162927_c0_seq1.mrna1;Target=comp162927_c0_seq1 427 498 +
ChrX	stalkie_big_nohaplotig	exon	38466235	38466660	87	-	.	Parent=comp162927_c0_seq1.mrna1;Target=comp162927_c0_seq1 1 426 +
ChrX	stalkie_big_nohaplotig	CDS	38466645	38466659	.	-	0	Parent=comp162927_c0_seq1.mrna1
ChrX	gffcl	locus	38468526	38469994	.	-	.	ID=RLOC_00002292;geneIDs=comp153434_c0_seq1.path1;transcripts=comp153434_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38468526	38469994	.	-	.	ID=comp153434_c0_seq1.mrna1;geneID=comp153434_c0_seq1.path1;Name=comp153434_c0_seq1;Dir=sensecoverage=99.9;identity=99.1;matches=850;mismatches=8;indels=0;unknowns=0;locus=RLOC_00002292
ChrX	stalkie_big_nohaplotig	exon	38468526	38468699	99	-	.	Parent=comp153434_c0_seq1.mrna1;Target=comp153434_c0_seq1 685 858 +
ChrX	stalkie_big_nohaplotig	exon	38468872	38469170	97	-	.	Parent=comp153434_c0_seq1.mrna1;Target=comp153434_c0_seq1 386 684 +
ChrX	stalkie_big_nohaplotig	exon	38469505	38469725	100	-	.	Parent=comp153434_c0_seq1.mrna1;Target=comp153434_c0_seq1 165 385 +
ChrX	stalkie_big_nohaplotig	exon	38469831	38469994	99	-	.	Parent=comp153434_c0_seq1.mrna1;Target=comp153434_c0_seq1 1 164 +
ChrX	stalkie_big_nohaplotig	CDS	38469660	38469725	.	-	0	Parent=comp153434_c0_seq1.mrna1;Target=comp153434_c0_seq1 165 230 +
ChrX	stalkie_big_nohaplotig	CDS	38469831	38469935	.	-	0	Parent=comp153434_c0_seq1.mrna1;Target=comp153434_c0_seq1 60 164 +
ChrX	gffcl	locus	38570190	38575649	.	-	.	ID=RLOC_00002293;geneIDs=comp152088_c0_seq1.path1;transcripts=comp152088_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38570190	38575649	.	-	.	ID=comp152088_c0_seq1.mrna1;geneID=comp152088_c0_seq1.path1;Name=comp152088_c0_seq1;Dir=sensecoverage=99.9;identity=99.2;matches=996;mismatches=7;indels=1;unknowns=0;Target=comp152088_c0_seq1 350 637 +;locus=RLOC_00002293
ChrX	stalkie_big_nohaplotig	exon	38570190	38570526	99	-	.	Parent=comp152088_c0_seq1.mrna1;Target=comp152088_c0_seq1 667 1004 +
ChrX	stalkie_big_nohaplotig	exon	38570592	38570928	100	-	.	Parent=comp152088_c0_seq1.mrna1;Target=comp152088_c0_seq1 330 666 +
ChrX	stalkie_big_nohaplotig	exon	38572105	38572168	92	-	.	Parent=comp152088_c0_seq1.mrna1;Target=comp152088_c0_seq1 266 329 +
ChrX	stalkie_big_nohaplotig	exon	38575385	38575649	99	-	.	Parent=comp152088_c0_seq1.mrna1;Target=comp152088_c0_seq1 1 265 +
ChrX	stalkie_big_nohaplotig	CDS	38570621	38570908	.	-	0	Parent=comp152088_c0_seq1.mrna1
ChrX	gffcl	locus	38618795	38717065	.	+	.	ID=RLOC_00002294;geneIDs=comp162346_c0_seq1.path1;transcripts=comp162346_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38618795	38717065	.	+	.	ID=comp162346_c0_seq1.mrna1;geneID=comp162346_c0_seq1.path1;Name=comp162346_c0_seq1;Dir=antisensecoverage=63.2;identity=92.3;matches=622;mismatches=9;indels=43;unknowns=0;locus=RLOC_00002294
ChrX	stalkie_big_nohaplotig	exon	38618795	38618977	100	+	.	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 2153 2335 -
ChrX	stalkie_big_nohaplotig	exon	38619675	38619836	100	+	.	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 1991 2152 -
ChrX	stalkie_big_nohaplotig	exon	38633436	38633438	100	+	.	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 1988 1990 -
ChrX	stalkie_big_nohaplotig	exon	38634182	38634189	87	+	.	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 1980 1987 -
ChrX	stalkie_big_nohaplotig	exon	38658387	38658397	100	+	.	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 1969 1979 -
ChrX	stalkie_big_nohaplotig	exon	38660146	38660156	81	+	.	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 1958 1968 -
ChrX	stalkie_big_nohaplotig	exon	38661668	38661677	100	+	.	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 1948 1957 -
ChrX	stalkie_big_nohaplotig	exon	38669545	38669555	90	+	.	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 1905 1914 -
ChrX	stalkie_big_nohaplotig	exon	38670894	38670904	100	+	.	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 1879 1889 -
ChrX	stalkie_big_nohaplotig	exon	38673407	38673420	62	+	.	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 1863 1878 -
ChrX	stalkie_big_nohaplotig	exon	38679083	38679090	87	+	.	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 1855 1862 -
ChrX	stalkie_big_nohaplotig	exon	38691892	38691899	100	+	.	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 1847 1854 -
ChrX	stalkie_big_nohaplotig	exon	38692136	38692149	100	+	.	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 1833 1846 -
ChrX	stalkie_big_nohaplotig	exon	38697127	38697132	83	+	.	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 1827 1832 -
ChrX	stalkie_big_nohaplotig	exon	38700511	38700562	23	+	.	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 1815 1826 -
ChrX	stalkie_big_nohaplotig	exon	38712784	38712886	100	+	.	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 1712 1814 -
ChrX	stalkie_big_nohaplotig	exon	38714591	38714599	100	+	.	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 1461 1469 -
ChrX	stalkie_big_nohaplotig	exon	38714604	38714612	100	+	.	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 1380 1388 -
ChrX	stalkie_big_nohaplotig	exon	38714616	38714624	100	+	.	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 1268 1276 -
ChrX	stalkie_big_nohaplotig	exon	38714986	38714993	100	+	.	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 1148 1155 -
ChrX	stalkie_big_nohaplotig	exon	38717033	38717041	100	+	.	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 607 615 -
ChrX	stalkie_big_nohaplotig	exon	38717057	38717065	100	+	.	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 544 552 -
ChrX	stalkie_big_nohaplotig	CDS	38618795	38618977	.	+	0	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 2153 2335 .
ChrX	stalkie_big_nohaplotig	CDS	38619675	38619758	.	+	0	Parent=comp162346_c0_seq1.mrna1;Target=comp162346_c0_seq1 2069 2152 .
ChrX	gffcl	locus	38708277	38710488	.	+	.	ID=RLOC_00002295;geneIDs=ORF1429.path1;transcripts=ORF1429.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38708277	38710488	.	+	.	ID=ORF1429.mrna1;geneID=ORF1429.path1;Name=ORF1429;Dir=sensecoverage=100.0;identity=99.9;matches=1106;mismatches=0;indels=1;unknowns=0;locus=RLOC_00002295
ChrX	stalkie_big_nohaplotig	exon	38708277	38708338	100	+	.	Parent=ORF1429.mrna1;Target=ORF1429 1 62 +
ChrX	stalkie_big_nohaplotig	exon	38708741	38708882	100	+	.	Parent=ORF1429.mrna1;Target=ORF1429 63 204 +
ChrX	stalkie_big_nohaplotig	exon	38709587	38710488	99	+	.	Parent=ORF1429.mrna1;Target=ORF1429 205 1107 +
ChrX	stalkie_big_nohaplotig	CDS	38708277	38708338	.	+	0	Parent=ORF1429.mrna1;Target=ORF1429 1 62 +
ChrX	stalkie_big_nohaplotig	CDS	38708741	38708882	.	+	1	Parent=ORF1429.mrna1;Target=ORF1429 63 204 +
ChrX	stalkie_big_nohaplotig	CDS	38709587	38710488	.	+	0	Parent=ORF1429.mrna1;Target=ORF1429 205 1107 +
ChrX	gffcl	locus	38735600	38736639	.	-	.	ID=RLOC_00002296;geneIDs=comp161507_c0_seq1.path1;transcripts=comp161507_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38735600	38736639	.	-	.	ID=comp161507_c0_seq1.mrna1;geneID=comp161507_c0_seq1.path1;Name=comp161507_c0_seq1;Dir=antisensecoverage=46.9;identity=99.6;matches=748;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002296
ChrX	stalkie_big_nohaplotig	exon	38735600	38735865	100	-	.	Parent=comp161507_c0_seq1.mrna1;Target=comp161507_c0_seq1 1 266 -
ChrX	stalkie_big_nohaplotig	exon	38735921	38736018	100	-	.	Parent=comp161507_c0_seq1.mrna1;Target=comp161507_c0_seq1 267 364 -
ChrX	stalkie_big_nohaplotig	exon	38736124	38736270	100	-	.	Parent=comp161507_c0_seq1.mrna1;Target=comp161507_c0_seq1 365 511 -
ChrX	stalkie_big_nohaplotig	exon	38736400	38736639	98	-	.	Parent=comp161507_c0_seq1.mrna1;Target=comp161507_c0_seq1 512 751 -
ChrX	gffcl	locus	38739899	38741709	.	+	.	ID=RLOC_00002297;geneIDs=ORF268.path1;transcripts=ORF268.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38739899	38741709	.	+	.	ID=ORF268.mrna1;geneID=ORF268.path1;Name=ORF268;Dir=sensecoverage=13.0;identity=94.4;matches=271;mismatches=4;indels=12;unknowns=0;locus=RLOC_00002297
ChrX	stalkie_big_nohaplotig	exon	38739899	38739995	100	+	.	Parent=ORF268.mrna1;Target=ORF268 4 100 +
ChrX	stalkie_big_nohaplotig	exon	38741532	38741709	91	+	.	Parent=ORF268.mrna1;Target=ORF268 101 290 +
ChrX	stalkie_big_nohaplotig	CDS	38739899	38739995	.	+	0	Parent=ORF268.mrna1;Target=ORF268 4 100 +
ChrX	stalkie_big_nohaplotig	CDS	38741532	38741707	.	+	2	Parent=ORF268.mrna1;Target=ORF268 101 288 +
ChrX	gffcl	locus	38744647	38751301	.	-	.	ID=RLOC_00002298;geneIDs=comp156881_c1_seq1.path1;transcripts=comp156881_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38744647	38751301	.	-	.	ID=comp156881_c1_seq1.mrna1;geneID=comp156881_c1_seq1.path1;Name=comp156881_c1_seq1;Dir=sensecoverage=77.3;identity=95.4;matches=796;mismatches=30;indels=8;unknowns=0;locus=RLOC_00002298
ChrX	stalkie_big_nohaplotig	exon	38744647	38744816	100	-	.	Parent=comp156881_c1_seq1.mrna1;Target=comp156881_c1_seq1 1501 1670 +
ChrX	stalkie_big_nohaplotig	exon	38744897	38745426	100	-	.	Parent=comp156881_c1_seq1.mrna1;Target=comp156881_c1_seq1 971 1500 +
ChrX	stalkie_big_nohaplotig	exon	38745805	38745812	100	-	.	Parent=comp156881_c1_seq1.mrna1;Target=comp156881_c1_seq1 569 576 +
ChrX	stalkie_big_nohaplotig	exon	38746729	38746779	58	-	.	Parent=comp156881_c1_seq1.mrna1;Target=comp156881_c1_seq1 481 533 +
ChrX	stalkie_big_nohaplotig	exon	38747015	38747018	100	-	.	Parent=comp156881_c1_seq1.mrna1;Target=comp156881_c1_seq1 477 480 +
ChrX	stalkie_big_nohaplotig	exon	38747165	38747170	100	-	.	Parent=comp156881_c1_seq1.mrna1;Target=comp156881_c1_seq1 471 476 +
ChrX	stalkie_big_nohaplotig	exon	38747534	38747542	100	-	.	Parent=comp156881_c1_seq1.mrna1;Target=comp156881_c1_seq1 462 470 +
ChrX	stalkie_big_nohaplotig	exon	38750752	38750757	83	-	.	Parent=comp156881_c1_seq1.mrna1;Target=comp156881_c1_seq1 456 461 +
ChrX	stalkie_big_nohaplotig	exon	38751254	38751283	58	-	.	Parent=comp156881_c1_seq1.mrna1;Target=comp156881_c1_seq1 420 455 +
ChrX	stalkie_big_nohaplotig	exon	38751292	38751301	100	-	.	Parent=comp156881_c1_seq1.mrna1;Target=comp156881_c1_seq1 379 388 +
ChrX	stalkie_big_nohaplotig	CDS	38744752	38744816	.	-	2	Parent=comp156881_c1_seq1.mrna1;Target=comp156881_c1_seq1 1501 1565 +
ChrX	stalkie_big_nohaplotig	CDS	38744897	38744903	.	-	0	Parent=comp156881_c1_seq1.mrna1;Target=comp156881_c1_seq1 1494 1500 +
ChrX	gffcl	locus	38754691	38755405	.	-	.	ID=RLOC_00002299;geneIDs=comp156998_c0_seq1.path1;transcripts=comp156998_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38754691	38755405	.	-	.	ID=comp156998_c0_seq1.mrna1;geneID=comp156998_c0_seq1.path1;Name=comp156998_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=635;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002299
ChrX	stalkie_big_nohaplotig	exon	38754691	38755189	100	-	.	Parent=comp156998_c0_seq1.mrna1;Target=comp156998_c0_seq1 1 499 -
ChrX	stalkie_big_nohaplotig	exon	38755270	38755405	100	-	.	Parent=comp156998_c0_seq1.mrna1;Target=comp156998_c0_seq1 500 635 -
ChrX	stalkie_big_nohaplotig	CDS	38755054	38755189	.	-	1	Parent=comp156998_c0_seq1.mrna1;Target=comp156998_c0_seq1 364 499 .
ChrX	stalkie_big_nohaplotig	CDS	38755270	38755403	.	-	0	Parent=comp156998_c0_seq1.mrna1;Target=comp156998_c0_seq1 500 633 .
ChrX	gffcl	locus	38786690	38787135	.	+	.	ID=RLOC_00002303;geneIDs=comp153789_c0_seq1.path1;transcripts=comp153789_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38786690	38787135	.	+	.	ID=comp153789_c0_seq1.mrna1;geneID=comp153789_c0_seq1.path1;Name=comp153789_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=445;mismatches=1;indels=1;unknowns=0;Target=comp153789_c0_seq1 447 1 .;CDS_Target=comp153789_c0_seq1 447 82 .;locus=RLOC_00002303
ChrX	stalkie_big_nohaplotig	exon	38786690	38787135	99	+	.	Parent=comp153789_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	38786770	38787135	.	+	0	Parent=comp153789_c0_seq1.mrna1
ChrX	gffcl	locus	38790414	38795908	.	+	.	ID=RLOC_00002304;geneIDs=comp149197_c1_seq1.path1;transcripts=comp149197_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38790414	38795908	.	+	.	ID=comp149197_c1_seq1.mrna1;geneID=comp149197_c1_seq1.path1;Name=comp149197_c1_seq1;Dir=sensecoverage=99.5;identity=99.8;matches=1075;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002304
ChrX	stalkie_big_nohaplotig	exon	38790414	38790684	99	+	.	Parent=comp149197_c1_seq1.mrna1;Target=comp149197_c1_seq1 6 276 +
ChrX	stalkie_big_nohaplotig	exon	38794986	38795088	100	+	.	Parent=comp149197_c1_seq1.mrna1;Target=comp149197_c1_seq1 277 379 +
ChrX	stalkie_big_nohaplotig	exon	38795206	38795908	99	+	.	Parent=comp149197_c1_seq1.mrna1;Target=comp149197_c1_seq1 380 1082 +
ChrX	stalkie_big_nohaplotig	CDS	38794998	38795088	.	+	0	Parent=comp149197_c1_seq1.mrna1;Target=comp149197_c1_seq1 289 379 +
ChrX	stalkie_big_nohaplotig	CDS	38795206	38795735	.	+	2	Parent=comp149197_c1_seq1.mrna1;Target=comp149197_c1_seq1 380 909 +
ChrX	gffcl	locus	38810132	38810919	.	+	.	ID=RLOC_00002305;geneIDs=comp146568_c0_seq1.path1;transcripts=comp146568_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38810132	38810919	.	+	.	ID=comp146568_c0_seq1.mrna1;geneID=comp146568_c0_seq1.path1;Name=comp146568_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=785;mismatches=3;indels=0;unknowns=0;Target=comp146568_c0_seq1 788 1 .;CDS_Target=comp146568_c0_seq1 653 3 .;locus=RLOC_00002305
ChrX	stalkie_big_nohaplotig	exon	38810132	38810919	99	+	.	Parent=comp146568_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	38810134	38810784	.	+	0	Parent=comp146568_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38859243	40885859	.	+	.	ID=comp159209_c0_seq1.mrna1;geneID=comp159209_c0_seq1.path1;Name=comp159209_c0_seq1;Dir=sensecoverage=98.9;identity=90.7;matches=1527;mismatches=65;indels=91;unknowns=0;Target=comp159209_c0_seq1 389 700 +;locus=RLOC_00002306
ChrX	stalkie_big_nohaplotig	exon	38859243	38859476	98	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1 233 +
ChrX	stalkie_big_nohaplotig	exon	38865137	38866074	98	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 234 1171 +
ChrX	stalkie_big_nohaplotig	exon	38866141	38866235	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1172 1266 +
ChrX	stalkie_big_nohaplotig	exon	38873617	38873648	47	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1274 1301 +
ChrX	stalkie_big_nohaplotig	exon	38886466	38886475	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1302 1311 +
ChrX	stalkie_big_nohaplotig	exon	38889589	38889623	30	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1339 1373 +
ChrX	stalkie_big_nohaplotig	exon	40676904	40676910	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1374 1380 +
ChrX	stalkie_big_nohaplotig	exon	40689597	40689607	81	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1381 1391 +
ChrX	stalkie_big_nohaplotig	exon	40689638	40689646	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1442 1450 +
ChrX	stalkie_big_nohaplotig	exon	40695765	40695781	23	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1458 1504 +
ChrX	stalkie_big_nohaplotig	exon	40700664	40700666	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1505 1507 +
ChrX	stalkie_big_nohaplotig	exon	40707825	40707834	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1508 1517 +
ChrX	stalkie_big_nohaplotig	exon	40730584	40730587	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1518 1521 +
ChrX	stalkie_big_nohaplotig	exon	40737471	40737475	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1522 1526 +
ChrX	stalkie_big_nohaplotig	exon	40747891	40747893	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1527 1529 +
ChrX	stalkie_big_nohaplotig	exon	40754937	40754941	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1530 1534 +
ChrX	stalkie_big_nohaplotig	exon	40760649	40760655	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1535 1541 +
ChrX	stalkie_big_nohaplotig	exon	40764450	40764455	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1542 1547 +
ChrX	stalkie_big_nohaplotig	exon	40774988	40775011	75	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1548 1569 +
ChrX	stalkie_big_nohaplotig	exon	40780903	40780908	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1570 1575 +
ChrX	stalkie_big_nohaplotig	exon	40799263	40799298	60	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1576 1607 +
ChrX	stalkie_big_nohaplotig	exon	40800352	40800360	66	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1608 1616 +
ChrX	stalkie_big_nohaplotig	exon	40802709	40802710	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1617 1618 +
ChrX	stalkie_big_nohaplotig	exon	40804501	40804503	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1619 1621 +
ChrX	stalkie_big_nohaplotig	exon	40804783	40804788	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1622 1627 +
ChrX	stalkie_big_nohaplotig	exon	40805910	40805915	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1628 1633 +
ChrX	stalkie_big_nohaplotig	exon	40809946	40809953	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1634 1641 +
ChrX	stalkie_big_nohaplotig	exon	40815865	40815870	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1642 1647 +
ChrX	stalkie_big_nohaplotig	exon	40830294	40830313	38	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1648 1697 +
ChrX	stalkie_big_nohaplotig	exon	40846550	40846552	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1698 1700 +
ChrX	stalkie_big_nohaplotig	exon	40849673	40849677	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1701 1705 +
ChrX	stalkie_big_nohaplotig	exon	40854131	40854140	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1706 1715 +
ChrX	stalkie_big_nohaplotig	exon	40854698	40854702	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1716 1720 +
ChrX	stalkie_big_nohaplotig	exon	40855536	40855543	87	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1721 1728 +
ChrX	stalkie_big_nohaplotig	exon	40858393	40858399	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1729 1735 +
ChrX	stalkie_big_nohaplotig	exon	40868044	40868048	80	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1736 1740 +
ChrX	stalkie_big_nohaplotig	exon	40871360	40871363	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1741 1744 +
ChrX	stalkie_big_nohaplotig	exon	40876108	40876111	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1745 1748 +
ChrX	stalkie_big_nohaplotig	exon	40880182	40880183	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1749 1750 +
ChrX	stalkie_big_nohaplotig	exon	40885857	40885859	100	+	.	Parent=comp159209_c0_seq1.mrna1;Target=comp159209_c0_seq1 1751 1753 +
ChrX	stalkie_big_nohaplotig	CDS	38865292	38865603	.	+	0	Parent=comp159209_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40692634	40720498	.	+	.	ID=FBgn0086783.1.mrna1;geneID=FBgn0086783.1.path1;Name=FBgn0086783.1;Dir=sensecoverage=100.0;identity=100.0;matches=5904;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002306
ChrX	stalkie_big_nohaplotig	exon	40692634	40692855	100	+	.	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 1 222 +
ChrX	stalkie_big_nohaplotig	exon	40693608	40693751	100	+	.	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 223 366 +
ChrX	stalkie_big_nohaplotig	exon	40694771	40695151	100	+	.	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 367 747 +
ChrX	stalkie_big_nohaplotig	exon	40695287	40695350	100	+	.	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 748 811 +
ChrX	stalkie_big_nohaplotig	exon	40695978	40696076	100	+	.	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 812 910 +
ChrX	stalkie_big_nohaplotig	exon	40699271	40699374	100	+	.	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 911 1014 +
ChrX	stalkie_big_nohaplotig	exon	40700905	40701312	100	+	.	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 1015 1422 +
ChrX	stalkie_big_nohaplotig	exon	40702440	40702610	100	+	.	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 1423 1593 +
ChrX	stalkie_big_nohaplotig	exon	40703898	40704487	100	+	.	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 1594 2183 +
ChrX	stalkie_big_nohaplotig	exon	40705337	40705454	100	+	.	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 2184 2301 +
ChrX	stalkie_big_nohaplotig	exon	40709604	40709867	100	+	.	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 2302 2565 +
ChrX	stalkie_big_nohaplotig	exon	40713635	40713844	100	+	.	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 2566 2775 +
ChrX	stalkie_big_nohaplotig	exon	40714780	40715666	100	+	.	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 2776 3662 +
ChrX	stalkie_big_nohaplotig	exon	40715863	40715941	100	+	.	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 3663 3741 +
ChrX	stalkie_big_nohaplotig	exon	40716840	40718015	100	+	.	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 3742 4917 +
ChrX	stalkie_big_nohaplotig	exon	40718110	40719015	100	+	.	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 4918 5823 +
ChrX	stalkie_big_nohaplotig	exon	40720418	40720498	100	+	.	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 5824 5904 +
ChrX	stalkie_big_nohaplotig	CDS	40692634	40692855	.	+	0	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 1 222 +
ChrX	stalkie_big_nohaplotig	CDS	40693608	40693751	.	+	0	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 223 366 +
ChrX	stalkie_big_nohaplotig	CDS	40694771	40695151	.	+	0	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 367 747 +
ChrX	stalkie_big_nohaplotig	CDS	40695287	40695350	.	+	0	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 748 811 +
ChrX	stalkie_big_nohaplotig	CDS	40695978	40696076	.	+	2	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 812 910 +
ChrX	stalkie_big_nohaplotig	CDS	40699271	40699374	.	+	2	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 911 1014 +
ChrX	stalkie_big_nohaplotig	CDS	40700905	40701312	.	+	0	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 1015 1422 +
ChrX	stalkie_big_nohaplotig	CDS	40702440	40702610	.	+	0	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 1423 1593 +
ChrX	stalkie_big_nohaplotig	CDS	40703898	40704487	.	+	0	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 1594 2183 +
ChrX	stalkie_big_nohaplotig	CDS	40705337	40705454	.	+	1	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 2184 2301 +
ChrX	stalkie_big_nohaplotig	CDS	40709604	40709867	.	+	0	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 2302 2565 +
ChrX	stalkie_big_nohaplotig	CDS	40713635	40713844	.	+	0	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 2566 2775 +
ChrX	stalkie_big_nohaplotig	CDS	40714780	40715666	.	+	0	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 2776 3662 +
ChrX	stalkie_big_nohaplotig	CDS	40715863	40715941	.	+	1	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 3663 3741 +
ChrX	stalkie_big_nohaplotig	CDS	40716840	40718015	.	+	0	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 3742 4917 +
ChrX	stalkie_big_nohaplotig	CDS	40718110	40719015	.	+	0	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 4918 5823 +
ChrX	stalkie_big_nohaplotig	CDS	40720418	40720498	.	+	0	Parent=FBgn0086783.1.mrna1;Target=FBgn0086783.1 5824 5904 +
ChrX	stalkie_big_nohaplotig	mRNA	40696055	40697713	.	+	.	ID=comp81814_c0_seq1.mrna1;geneID=comp81814_c0_seq1.path1;Name=comp81814_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=427;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002306
ChrX	stalkie_big_nohaplotig	exon	40696055	40696076	100	+	.	Parent=comp81814_c0_seq1.mrna1;Target=comp81814_c0_seq1 1 22 +
ChrX	stalkie_big_nohaplotig	exon	40697308	40697713	99	+	.	Parent=comp81814_c0_seq1.mrna1;Target=comp81814_c0_seq1 23 428 +
ChrX	stalkie_big_nohaplotig	CDS	40696055	40696076	.	+	0	Parent=comp81814_c0_seq1.mrna1;Target=comp81814_c0_seq1 1 22 +
ChrX	stalkie_big_nohaplotig	CDS	40697308	40697423	.	+	2	Parent=comp81814_c0_seq1.mrna1;Target=comp81814_c0_seq1 23 138 +
ChrX	stalkie_big_nohaplotig	mRNA	40698783	40699291	.	-	.	ID=comp100971_c0_seq1.mrna1;geneID=comp100971_c0_seq1.path1;Name=comp100971_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=509;mismatches=0;indels=0;unknowns=0;Target=comp100971_c0_seq1 509 1 .;CDS_Target=comp100971_c0_seq1 290 198 .;locus=RLOC_00002306
ChrX	stalkie_big_nohaplotig	exon	40698783	40699291	100	-	.	Parent=comp100971_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40699002	40699094	.	-	0	Parent=comp100971_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40699352	40700926	.	+	.	ID=comp115987_c0_seq1.mrna1;geneID=comp115987_c0_seq1.path1;Name=comp115987_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1575;mismatches=0;indels=1;unknowns=0;Target=comp115987_c0_seq1 1576 1 .;CDS_Target=comp115987_c0_seq1 493 155 .;locus=RLOC_00002306
ChrX	stalkie_big_nohaplotig	exon	40699352	40700926	99	+	.	Parent=comp115987_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40699506	40699844	.	+	0	Parent=comp115987_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40701290	40701824	.	-	.	ID=comp298900_c0_seq1.mrna1;geneID=comp298900_c0_seq1.path1;Name=comp298900_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=535;mismatches=0;indels=0;unknowns=0;Target=comp298900_c0_seq1 535 1 .;CDS_Target=comp298900_c0_seq1 141 37 .;locus=RLOC_00002306
ChrX	stalkie_big_nohaplotig	exon	40701290	40701824	100	-	.	Parent=comp298900_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40701684	40701788	.	-	0	Parent=comp298900_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40701948	40702462	.	+	.	ID=comp145375_c0_seq1.mrna1;geneID=comp145375_c0_seq1.path1;Name=comp145375_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=514;mismatches=1;indels=2;unknowns=0;Target=comp145375_c0_seq1 517 1 .;CDS_Target=comp145375_c0_seq1 299 252 .;locus=RLOC_00002306
ChrX	stalkie_big_nohaplotig	exon	40701948	40702462	99	+	.	Parent=comp145375_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40702198	40702244	.	+	0	Parent=comp145375_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40703365	40703917	.	-	.	ID=comp136409_c0_seq1.mrna1;geneID=comp136409_c0_seq1.path1;Name=comp136409_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=548;mismatches=5;indels=0;unknowns=0;Target=comp136409_c0_seq1 553 1 .;CDS_Target=comp136409_c0_seq1 414 328 .;locus=RLOC_00002306
ChrX	stalkie_big_nohaplotig	exon	40703365	40703917	99	-	.	Parent=comp136409_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40703504	40703590	.	-	0	Parent=comp136409_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40704442	40705090	.	+	.	ID=comp399433_c0_seq1.mrna1;geneID=comp399433_c0_seq1.path1;Name=comp399433_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=647;mismatches=2;indels=0;unknowns=0;Target=comp399433_c0_seq1 649 1 .;CDS_Target=comp399433_c0_seq1 105 1 .;locus=RLOC_00002306
ChrX	stalkie_big_nohaplotig	exon	40704442	40705090	99	+	.	Parent=comp399433_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40704442	40704546	.	+	0	Parent=comp399433_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40705915	40707009	.	+	.	ID=comp148273_c0_seq1.mrna2;geneID=comp148273_c0_seq1.path2;Name=comp148273_c0_seq1;Dir=indeterminatecoverage=78.7;identity=99.9;matches=1094;mismatches=1;indels=0;unknowns=0;Target=comp148273_c0_seq1 1391 297 .;locus=RLOC_00002306
ChrX	stalkie_big_nohaplotig	exon	40705915	40707009	99	+	.	Parent=comp148273_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	40707106	40709619	.	+	.	ID=comp130573_c0_seq1.mrna1;geneID=comp130573_c0_seq1.path1;Name=comp130573_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=939;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002306
ChrX	stalkie_big_nohaplotig	exon	40707106	40708030	99	+	.	Parent=comp130573_c0_seq1.mrna1;Target=comp130573_c0_seq1 17 941 -
ChrX	stalkie_big_nohaplotig	exon	40709604	40709619	100	+	.	Parent=comp130573_c0_seq1.mrna1;Target=comp130573_c0_seq1 1 16 -
ChrX	stalkie_big_nohaplotig	CDS	40707860	40708030	.	+	0	Parent=comp130573_c0_seq1.mrna1;Target=comp130573_c0_seq1 17 187 .
ChrX	stalkie_big_nohaplotig	CDS	40709604	40709618	.	+	0	Parent=comp130573_c0_seq1.mrna1;Target=comp130573_c0_seq1 2 16 .
ChrX	stalkie_big_nohaplotig	mRNA	40708008	40709624	.	-	.	ID=comp147724_c0_seq1.mrna1;geneID=comp147724_c0_seq1.path1;Name=comp147724_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1615;mismatches=2;indels=6;unknowns=0;Target=comp147724_c0_seq1 1623 1 .;CDS_Target=comp147724_c0_seq1 1621 1373 .;locus=RLOC_00002306
ChrX	stalkie_big_nohaplotig	exon	40708008	40709624	99	-	.	Parent=comp147724_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40708010	40708258	.	-	0	Parent=comp147724_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40712343	40713634	.	+	.	ID=comp135085_c0_seq1.mrna1;geneID=comp135085_c0_seq1.path1;Name=comp135085_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=1274;mismatches=3;indels=21;unknowns=0;Target=comp135085_c0_seq1 1283 1 .;CDS_Target=comp135085_c0_seq1 1009 929 .;locus=RLOC_00002306
ChrX	stalkie_big_nohaplotig	exon	40712343	40713634	98	+	.	Parent=comp135085_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40713281	40713360	.	+	0	Parent=comp135085_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40715668	40715885	.	-	.	ID=comp135515_c0_seq1.mrna1;geneID=comp135515_c0_seq1.path1;Name=comp135515_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=217;mismatches=1;indels=0;unknowns=0;Target=comp135515_c0_seq1 218 1 .;CDS_Target=comp135515_c0_seq1 46 2 .;locus=RLOC_00002306
ChrX	stalkie_big_nohaplotig	exon	40715668	40715885	99	-	.	Parent=comp135515_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40715840	40715884	.	-	0	Parent=comp135515_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40715919	40716384	.	+	.	ID=comp179813_c0_seq1.mrna1;geneID=comp179813_c0_seq1.path1;Name=comp179813_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=466;mismatches=0;indels=0;unknowns=0;Target=comp179813_c0_seq1 466 1 .;CDS_Target=comp179813_c0_seq1 200 123 .;locus=RLOC_00002306
ChrX	stalkie_big_nohaplotig	exon	40715919	40716384	100	+	.	Parent=comp179813_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40716041	40716118	.	+	0	Parent=comp179813_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40716417	40716860	.	-	.	ID=comp135639_c0_seq1.mrna1;geneID=comp135639_c0_seq1.path1;Name=comp135639_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=443;mismatches=1;indels=0;unknowns=0;Target=comp135639_c0_seq1 444 1 .;CDS_Target=comp135639_c0_seq1 274 200 .;locus=RLOC_00002306
ChrX	stalkie_big_nohaplotig	exon	40716417	40716860	99	-	.	Parent=comp135639_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40716587	40716661	.	-	0	Parent=comp135639_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40719518	40720440	.	-	.	ID=comp147591_c0_seq1.mrna1;geneID=comp147591_c0_seq1.path1;Name=comp147591_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=915;mismatches=8;indels=0;unknowns=0;Target=comp147591_c0_seq1 923 1 .;CDS_Target=comp147591_c0_seq1 658 515 .;locus=RLOC_00002306
ChrX	stalkie_big_nohaplotig	exon	40719518	40720440	99	-	.	Parent=comp147591_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40719783	40719926	.	-	0	Parent=comp147591_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40805232	40814865	.	+	.	ID=comp144246_c0_seq1.mrna1;geneID=comp144246_c0_seq1.path1;Name=comp144246_c0_seq1;Dir=antisensecoverage=96.8;identity=99.3;matches=1375;mismatches=4;indels=6;unknowns=0;locus=RLOC_00002306
ChrX	stalkie_big_nohaplotig	exon	40805232	40805460	100	+	.	Parent=comp144246_c0_seq1.mrna1;Target=comp144246_c0_seq1 1198 1426 -
ChrX	stalkie_big_nohaplotig	exon	40805696	40806006	100	+	.	Parent=comp144246_c0_seq1.mrna1;Target=comp144246_c0_seq1 887 1197 -
ChrX	stalkie_big_nohaplotig	exon	40813916	40813994	100	+	.	Parent=comp144246_c0_seq1.mrna1;Target=comp144246_c0_seq1 808 886 -
ChrX	stalkie_big_nohaplotig	exon	40814101	40814865	98	+	.	Parent=comp144246_c0_seq1.mrna1;Target=comp144246_c0_seq1 47 807 -
ChrX	stalkie_big_nohaplotig	CDS	40813992	40813994	.	+	0	Parent=comp144246_c0_seq1.mrna1;Target=comp144246_c0_seq1 808 810 .
ChrX	stalkie_big_nohaplotig	CDS	40814101	40814279	.	+	0	Parent=comp144246_c0_seq1.mrna1;Target=comp144246_c0_seq1 634 807 .
ChrX	stalkie_big_nohaplotig	mRNA	40846479	40847716	.	+	.	ID=comp154514_c0_seq1.mrna1;geneID=comp154514_c0_seq1.path1;Name=comp154514_c0_seq1;Dir=indeterminatecoverage=98.0;identity=95.1;matches=1201;mismatches=23;indels=39;unknowns=0;Target=comp154514_c0_seq1 1249 1 .;CDS_Target=comp154514_c0_seq1 954 826 .;locus=RLOC_00002306
ChrX	stalkie_big_nohaplotig	exon	40846479	40847716	95	+	.	Parent=comp154514_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40847291	40847419	.	+	0	Parent=comp154514_c0_seq1.mrna1
ChrX	gffcl	locus	38877541	38878414	.	+	.	ID=RLOC_00002307;geneIDs=comp85540_c0_seq1.path1;transcripts=comp85540_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38877541	38878414	.	+	.	ID=comp85540_c0_seq1.mrna1;geneID=comp85540_c0_seq1.path1;Name=comp85540_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=874;mismatches=0;indels=1;unknowns=0;Target=comp85540_c0_seq1 875 1 .;CDS_Target=comp85540_c0_seq1 496 338 .;locus=RLOC_00002307
ChrX	stalkie_big_nohaplotig	exon	38877541	38878414	99	+	.	Parent=comp85540_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	38877878	38878036	.	+	0	Parent=comp85540_c0_seq1.mrna1
ChrX	gffcl	locus	38903149	38903440	.	+	.	ID=RLOC_00002309;geneIDs=comp141837_c0_seq1.path1;transcripts=comp141837_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38903149	38903440	.	+	.	ID=comp141837_c0_seq1.mrna1;geneID=comp141837_c0_seq1.path1;Name=comp141837_c0_seq1;Dir=indeterminatecoverage=94.8;identity=95.9;matches=280;mismatches=12;indels=0;unknowns=0;Target=comp141837_c0_seq1 292 1 .;CDS_Target=comp141837_c0_seq1 266 123 .;locus=RLOC_00002309
ChrX	stalkie_big_nohaplotig	exon	38903149	38903440	95	+	.	Parent=comp141837_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	38903271	38903414	.	+	0	Parent=comp141837_c0_seq1.mrna1
ChrX	gffcl	locus	38912698	38913162	.	-	.	ID=RLOC_00002310;geneIDs=comp1113755_c0_seq1.path1;transcripts=comp1113755_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38912698	38913162	.	-	.	ID=comp1113755_c0_seq1.mrna1;geneID=comp1113755_c0_seq1.path1;Name=comp1113755_c0_seq1;Dir=indeterminatecoverage=98.3;identity=100.0;matches=465;mismatches=0;indels=0;unknowns=0;Target=comp1113755_c0_seq1 473 9 .;CDS_Target=comp1113755_c0_seq1 473 342 .;locus=RLOC_00002310
ChrX	stalkie_big_nohaplotig	exon	38912698	38913162	100	-	.	Parent=comp1113755_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	38912698	38912829	.	-	0	Parent=comp1113755_c0_seq1.mrna1
ChrX	gffcl	locus	38913498	38914096	.	-	.	ID=RLOC_00002311;geneIDs=comp578778_c0_seq1.path1;transcripts=comp578778_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38913498	38914096	.	-	.	ID=comp578778_c0_seq1.mrna1;geneID=comp578778_c0_seq1.path1;Name=comp578778_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=599;mismatches=0;indels=0;unknowns=0;Target=comp578778_c0_seq1 599 1 .;CDS_Target=comp578778_c0_seq1 535 269 .;locus=RLOC_00002311
ChrX	stalkie_big_nohaplotig	exon	38913498	38914096	100	-	.	Parent=comp578778_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	38913562	38913828	.	-	0	Parent=comp578778_c0_seq1.mrna1
ChrX	gffcl	locus	38914357	38923681	.	-	.	ID=RLOC_00002312;geneIDs=comp112704_c0_seq1.path1;transcripts=comp112704_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38914357	38923681	.	-	.	ID=comp112704_c0_seq1.mrna1;geneID=comp112704_c0_seq1.path1;Name=comp112704_c0_seq1;Dir=sensecoverage=99.2;identity=99.7;matches=1009;mismatches=2;indels=1;unknowns=0;Target=comp112704_c0_seq1 423 692 +;locus=RLOC_00002312
ChrX	stalkie_big_nohaplotig	exon	38914357	38915205	99	-	.	Parent=comp112704_c0_seq1.mrna1;Target=comp112704_c0_seq1 171 1019 +
ChrX	stalkie_big_nohaplotig	exon	38923519	38923681	98	-	.	Parent=comp112704_c0_seq1.mrna1;Target=comp112704_c0_seq1 9 170 +
ChrX	stalkie_big_nohaplotig	CDS	38914684	38914953	.	-	0	Parent=comp112704_c0_seq1.mrna1
ChrX	gffcl	locus	38938408	38974106	.	-	.	ID=RLOC_00002313;geneIDs=comp150241_c0_seq1.path1;transcripts=comp150241_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38938408	38974106	.	-	.	ID=comp150241_c0_seq1.mrna1;geneID=comp150241_c0_seq1.path1;Name=comp150241_c0_seq1;Dir=indeterminatecoverage=96.0;identity=99.3;matches=1347;mismatches=4;indels=5;unknowns=0;Target=comp150241_c0_seq1 220 89 .;locus=RLOC_00002313
ChrX	stalkie_big_nohaplotig	exon	38938408	38938413	100	-	.	Parent=comp150241_c0_seq1.mrna1;Target=comp150241_c0_seq1 1356 1351 .
ChrX	stalkie_big_nohaplotig	exon	38939786	38939790	100	-	.	Parent=comp150241_c0_seq1.mrna1;Target=comp150241_c0_seq1 1350 1346 .
ChrX	stalkie_big_nohaplotig	exon	38948956	38948969	52	-	.	Parent=comp150241_c0_seq1.mrna1;Target=comp150241_c0_seq1 1345 1327 .
ChrX	stalkie_big_nohaplotig	exon	38972463	38973405	100	-	.	Parent=comp150241_c0_seq1.mrna1;Target=comp150241_c0_seq1 1326 384 .
ChrX	stalkie_big_nohaplotig	exon	38973724	38974106	100	-	.	Parent=comp150241_c0_seq1.mrna1;Target=comp150241_c0_seq1 383 1 .
ChrX	stalkie_big_nohaplotig	CDS	38973887	38974018	.	-	0	Parent=comp150241_c0_seq1.mrna1
ChrX	gffcl	locus	38985070	38985396	.	+	.	ID=RLOC_00002314;geneIDs=comp146875_c1_seq1.path1;transcripts=comp146875_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38985070	38985396	.	+	.	ID=comp146875_c1_seq1.mrna1;geneID=comp146875_c1_seq1.path1;Name=comp146875_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=327;mismatches=0;indels=0;unknowns=0;Target=comp146875_c1_seq1 327 1 .;CDS_Target=comp146875_c1_seq1 175 2 .;locus=RLOC_00002314
ChrX	stalkie_big_nohaplotig	exon	38985070	38985396	100	+	.	Parent=comp146875_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	38985071	38985244	.	+	0	Parent=comp146875_c1_seq1.mrna1
ChrX	gffcl	locus	38985942	38986108	.	+	.	ID=RLOC_00002315;geneIDs=comp144176_c0_seq1.path1,comp144176_c0_seq1.path2;transcripts=comp144176_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	38985942	38986094	.	+	.	ID=comp144176_c0_seq1.mrna1;geneID=comp144176_c0_seq1.path1;Name=comp144176_c0_seq1;Dir=indeterminatecoverage=48.6;identity=94.1;matches=144;mismatches=9;indels=0;unknowns=0;Target=comp144176_c0_seq1 153 1 .;CDS_Target=comp144176_c0_seq1 153 2 .;locus=RLOC_00002315
ChrX	stalkie_big_nohaplotig	exon	38985942	38986094	94	+	.	Parent=comp144176_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	38985943	38986094	.	+	0	Parent=comp144176_c0_seq1.mrna1
ChrX	gffcl	locus	39032062	39032595	.	+	.	ID=RLOC_00002316;geneIDs=FBgn0031971.1.path1;transcripts=FBgn0031971.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39032062	39032595	.	+	.	ID=FBgn0031971.1.mrna1;geneID=FBgn0031971.1.path1;Name=FBgn0031971.1;Dir=sensecoverage=100.0;identity=100.0;matches=363;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002316
ChrX	stalkie_big_nohaplotig	exon	39032062	39032134	100	+	.	Parent=FBgn0031971.1.mrna1;Target=FBgn0031971.1 1 73 +
ChrX	stalkie_big_nohaplotig	exon	39032306	39032595	100	+	.	Parent=FBgn0031971.1.mrna1;Target=FBgn0031971.1 74 363 +
ChrX	stalkie_big_nohaplotig	CDS	39032062	39032134	.	+	0	Parent=FBgn0031971.1.mrna1;Target=FBgn0031971.1 1 73 +
ChrX	stalkie_big_nohaplotig	CDS	39032306	39032595	.	+	2	Parent=FBgn0031971.1.mrna1;Target=FBgn0031971.1 74 363 +
ChrX	gffcl	locus	39033198	39052234	.	-	.	ID=RLOC_00002317;geneIDs=FBgn0031972.1.path1;transcripts=FBgn0031972.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39033198	39052234	.	-	.	ID=FBgn0031972.1.mrna1;geneID=FBgn0031972.1.path1;Name=FBgn0031972.1;Dir=sensecoverage=100.0;identity=100.0;matches=1326;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002317
ChrX	stalkie_big_nohaplotig	exon	39033198	39033401	100	-	.	Parent=FBgn0031972.1.mrna1;Target=FBgn0031972.1 1123 1326 +
ChrX	stalkie_big_nohaplotig	exon	39033474	39033602	100	-	.	Parent=FBgn0031972.1.mrna1;Target=FBgn0031972.1 994 1122 +
ChrX	stalkie_big_nohaplotig	exon	39035947	39036076	100	-	.	Parent=FBgn0031972.1.mrna1;Target=FBgn0031972.1 864 993 +
ChrX	stalkie_big_nohaplotig	exon	39051084	39051263	100	-	.	Parent=FBgn0031972.1.mrna1;Target=FBgn0031972.1 684 863 +
ChrX	stalkie_big_nohaplotig	exon	39051347	39051657	100	-	.	Parent=FBgn0031972.1.mrna1;Target=FBgn0031972.1 373 683 +
ChrX	stalkie_big_nohaplotig	exon	39051719	39051917	100	-	.	Parent=FBgn0031972.1.mrna1;Target=FBgn0031972.1 174 372 +
ChrX	stalkie_big_nohaplotig	exon	39051988	39052075	100	-	.	Parent=FBgn0031972.1.mrna1;Target=FBgn0031972.1 86 173 +
ChrX	stalkie_big_nohaplotig	exon	39052150	39052234	100	-	.	Parent=FBgn0031972.1.mrna1;Target=FBgn0031972.1 1 85 +
ChrX	stalkie_big_nohaplotig	CDS	39033198	39033401	.	-	0	Parent=FBgn0031972.1.mrna1;Target=FBgn0031972.1 1123 1326 +
ChrX	stalkie_big_nohaplotig	CDS	39033474	39033602	.	-	0	Parent=FBgn0031972.1.mrna1;Target=FBgn0031972.1 994 1122 +
ChrX	stalkie_big_nohaplotig	CDS	39035947	39036076	.	-	1	Parent=FBgn0031972.1.mrna1;Target=FBgn0031972.1 864 993 +
ChrX	stalkie_big_nohaplotig	CDS	39051084	39051263	.	-	1	Parent=FBgn0031972.1.mrna1;Target=FBgn0031972.1 684 863 +
ChrX	stalkie_big_nohaplotig	CDS	39051347	39051657	.	-	0	Parent=FBgn0031972.1.mrna1;Target=FBgn0031972.1 373 683 +
ChrX	stalkie_big_nohaplotig	CDS	39051719	39051917	.	-	1	Parent=FBgn0031972.1.mrna1;Target=FBgn0031972.1 174 372 +
ChrX	stalkie_big_nohaplotig	CDS	39051988	39052075	.	-	2	Parent=FBgn0031972.1.mrna1;Target=FBgn0031972.1 86 173 +
ChrX	stalkie_big_nohaplotig	CDS	39052150	39052234	.	-	0	Parent=FBgn0031972.1.mrna1;Target=FBgn0031972.1 1 85 +
ChrX	gffcl	locus	39056624	39060779	.	-	.	ID=RLOC_00002318;geneIDs=FBgn0031973.1.path1;transcripts=FBgn0031973.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39056624	39060779	.	-	.	ID=FBgn0031973.1.mrna1;geneID=FBgn0031973.1.path1;Name=FBgn0031973.1;Dir=sensecoverage=99.9;identity=100.0;matches=1411;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002318
ChrX	stalkie_big_nohaplotig	exon	39056624	39057069	100	-	.	Parent=FBgn0031973.1.mrna1;Target=FBgn0031973.1 966 1411 +
ChrX	stalkie_big_nohaplotig	exon	39059815	39060779	100	-	.	Parent=FBgn0031973.1.mrna1;Target=FBgn0031973.1 1 965 +
ChrX	stalkie_big_nohaplotig	CDS	39056625	39057069	.	-	1	Parent=FBgn0031973.1.mrna1;Target=FBgn0031973.1 966 1410 +
ChrX	stalkie_big_nohaplotig	CDS	39059815	39060779	.	-	0	Parent=FBgn0031973.1.mrna1;Target=FBgn0031973.1 1 965 +
ChrX	gffcl	locus	39071405	39072772	.	+	.	ID=RLOC_00002319;geneIDs=FBgn0032671.1.path1;transcripts=FBgn0032671.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39071405	39072772	.	+	.	ID=FBgn0032671.1.mrna1;geneID=FBgn0032671.1.path1;Name=FBgn0032671.1;Dir=sensecoverage=100.0;identity=100.0;matches=1302;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002319
ChrX	stalkie_big_nohaplotig	exon	39071405	39072021	100	+	.	Parent=FBgn0032671.1.mrna1;Target=FBgn0032671.1 1 617 +
ChrX	stalkie_big_nohaplotig	exon	39072088	39072772	100	+	.	Parent=FBgn0032671.1.mrna1;Target=FBgn0032671.1 618 1302 +
ChrX	stalkie_big_nohaplotig	CDS	39071405	39072021	.	+	0	Parent=FBgn0032671.1.mrna1;Target=FBgn0032671.1 1 617 +
ChrX	stalkie_big_nohaplotig	CDS	39072088	39072772	.	+	1	Parent=FBgn0032671.1.mrna1;Target=FBgn0032671.1 618 1302 +
ChrX	gffcl	locus	39074098	39075302	.	+	.	ID=RLOC_00002320;geneIDs=FBgn0032881.1.path1;transcripts=FBgn0032881.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39074098	39075302	.	+	.	ID=FBgn0032881.1.mrna1;geneID=FBgn0032881.1.path1;Name=FBgn0032881.1;Dir=sensecoverage=100.0;identity=100.0;matches=1140;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002320
ChrX	stalkie_big_nohaplotig	exon	39074098	39074214	100	+	.	Parent=FBgn0032881.1.mrna1;Target=FBgn0032881.1 1 117 +
ChrX	stalkie_big_nohaplotig	exon	39074280	39075302	100	+	.	Parent=FBgn0032881.1.mrna1;Target=FBgn0032881.1 118 1140 +
ChrX	stalkie_big_nohaplotig	CDS	39074098	39074214	.	+	0	Parent=FBgn0032881.1.mrna1;Target=FBgn0032881.1 1 117 +
ChrX	stalkie_big_nohaplotig	CDS	39074280	39075302	.	+	0	Parent=FBgn0032881.1.mrna1;Target=FBgn0032881.1 118 1140 +
ChrX	gffcl	locus	39078828	39102277	.	.	.	ID=RLOC_00002321;geneIDs=comp150880_c0_seq1.path1,comp160389_c0_seq1.path1,comp162513_c1_seq1.path1;transcripts=comp160389_c0_seq1.mrna1,comp162513_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39078828	39102277	.	+	.	ID=comp160389_c0_seq1.mrna1;geneID=comp160389_c0_seq1.path1;Name=comp160389_c0_seq1;Dir=indeterminatecoverage=55.8;identity=99.9;matches=1200;mismatches=1;indels=0;unknowns=0;Target=comp160389_c0_seq1 756 637 .;locus=RLOC_00002321
ChrX	stalkie_big_nohaplotig	exon	39078828	39079964	100	+	.	Parent=comp160389_c0_seq1.mrna1;Target=comp160389_c0_seq1 1137 1 .
ChrX	stalkie_big_nohaplotig	exon	39083372	39083375	100	+	.	Parent=comp160389_c0_seq1.mrna1;Target=comp160389_c0_seq1 1141 1138 .
ChrX	stalkie_big_nohaplotig	exon	39086096	39086104	100	+	.	Parent=comp160389_c0_seq1.mrna1;Target=comp160389_c0_seq1 1150 1142 .
ChrX	stalkie_big_nohaplotig	exon	39090247	39090253	100	+	.	Parent=comp160389_c0_seq1.mrna1;Target=comp160389_c0_seq1 1186 1180 .
ChrX	stalkie_big_nohaplotig	exon	39090282	39090289	100	+	.	Parent=comp160389_c0_seq1.mrna1;Target=comp160389_c0_seq1 1247 1240 .
ChrX	stalkie_big_nohaplotig	exon	39090557	39090564	87	+	.	Parent=comp160389_c0_seq1.mrna1;Target=comp160389_c0_seq1 1255 1248 .
ChrX	stalkie_big_nohaplotig	exon	39091997	39092000	100	+	.	Parent=comp160389_c0_seq1.mrna1;Target=comp160389_c0_seq1 1259 1256 .
ChrX	stalkie_big_nohaplotig	exon	39095418	39095422	100	+	.	Parent=comp160389_c0_seq1.mrna1;Target=comp160389_c0_seq1 1264 1260 .
ChrX	stalkie_big_nohaplotig	exon	39097073	39097081	100	+	.	Parent=comp160389_c0_seq1.mrna1;Target=comp160389_c0_seq1 1273 1265 .
ChrX	stalkie_big_nohaplotig	exon	39097396	39097398	100	+	.	Parent=comp160389_c0_seq1.mrna1;Target=comp160389_c0_seq1 1276 1274 .
ChrX	stalkie_big_nohaplotig	exon	39102272	39102277	100	+	.	Parent=comp160389_c0_seq1.mrna1;Target=comp160389_c0_seq1 1282 1277 .
ChrX	stalkie_big_nohaplotig	CDS	39079464	39079583	.	+	0	Parent=comp160389_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39088253	39089808	.	-	.	ID=comp162513_c1_seq1.mrna1;geneID=comp162513_c1_seq1.path1;Name=comp162513_c1_seq1;Dir=indeterminatecoverage=99.2;identity=99.9;matches=1556;mismatches=0;indels=2;unknowns=0;Target=comp162513_c1_seq1 1571 14 .;CDS_Target=comp162513_c1_seq1 1246 1061 .;locus=RLOC_00002321
ChrX	stalkie_big_nohaplotig	exon	39088253	39089808	99	-	.	Parent=comp162513_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	39088578	39088763	.	-	0	Parent=comp162513_c1_seq1.mrna1
ChrX	gffcl	locus	39080363	39083203	.	-	.	ID=RLOC_00002322;geneIDs=comp148226_c0_seq1.path1;transcripts=comp148226_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39080363	39083203	.	-	.	ID=comp148226_c0_seq1.mrna1;geneID=comp148226_c0_seq1.path1;Name=comp148226_c0_seq1;Dir=sensecoverage=99.1;identity=99.8;matches=959;mismatches=0;indels=2;unknowns=0;Target=comp148226_c0_seq1 383 526 +;locus=RLOC_00002322
ChrX	stalkie_big_nohaplotig	exon	39080363	39080687	100	-	.	Parent=comp148226_c0_seq1.mrna1;Target=comp148226_c0_seq1 644 968 +
ChrX	stalkie_big_nohaplotig	exon	39082568	39083203	99	-	.	Parent=comp148226_c0_seq1.mrna1;Target=comp148226_c0_seq1 10 643 +
ChrX	stalkie_big_nohaplotig	CDS	39082685	39082828	.	-	0	Parent=comp148226_c0_seq1.mrna1
ChrX	gffcl	locus	39081126	39081776	.	-	.	ID=RLOC_00002323;geneIDs=comp150976_c1_seq1.path1;transcripts=comp150976_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39081126	39081776	.	-	.	ID=comp150976_c1_seq1.mrna1;geneID=comp150976_c1_seq1.path1;Name=comp150976_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=650;mismatches=1;indels=0;unknowns=0;Target=comp150976_c1_seq1 651 1 .;CDS_Target=comp150976_c1_seq1 533 408 .;locus=RLOC_00002323
ChrX	stalkie_big_nohaplotig	exon	39081126	39081776	99	-	.	Parent=comp150976_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	39081244	39081369	.	-	0	Parent=comp150976_c1_seq1.mrna1
ChrX	gffcl	locus	39081782	39082391	.	-	.	ID=RLOC_00002324;geneIDs=comp147187_c0_seq1.path1;transcripts=comp147187_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39081782	39082391	.	-	.	ID=comp147187_c0_seq1.mrna1;geneID=comp147187_c0_seq1.path1;Name=comp147187_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=601;mismatches=4;indels=5;unknowns=0;Target=comp147187_c0_seq1 605 1 .;CDS_Target=comp147187_c0_seq1 42 22 .;locus=RLOC_00002324
ChrX	stalkie_big_nohaplotig	exon	39081782	39082391	98	-	.	Parent=comp147187_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	39082350	39082370	.	-	0	Parent=comp147187_c0_seq1.mrna1
ChrX	gffcl	locus	39092413	39092746	.	-	.	ID=RLOC_00002325;geneIDs=comp49639_c0_seq1.path2;transcripts=comp49639_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	39092413	39092746	.	-	.	ID=comp49639_c0_seq1.mrna2;geneID=comp49639_c0_seq1.path2;Name=comp49639_c0_seq1;Dir=indeterminatecoverage=83.3;identity=98.2;matches=334;mismatches=0;indels=6;unknowns=0;Target=comp49639_c0_seq1 407 68 .;CDS_Target=comp49639_c0_seq1 304 185 .;locus=RLOC_00002325
ChrX	stalkie_big_nohaplotig	exon	39092413	39092746	98	-	.	Parent=comp49639_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	39092516	39092629	.	-	0	Parent=comp49639_c0_seq1.mrna2
ChrX	gffcl	locus	39095745	39103158	.	-	.	ID=RLOC_00002326;geneIDs=FBgn0262743.1.path1;transcripts=FBgn0262743.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39095745	39103158	.	-	.	ID=FBgn0262743.1.mrna1;geneID=FBgn0262743.1.path1;Name=FBgn0262743.1;Dir=sensecoverage=100.0;identity=100.0;matches=2705;mismatches=0;indels=1;unknowns=0;locus=RLOC_00002326
ChrX	stalkie_big_nohaplotig	exon	39095745	39096143	100	-	.	Parent=FBgn0262743.1.mrna1;Target=FBgn0262743.1 2308 2706 +
ChrX	stalkie_big_nohaplotig	exon	39096671	39097597	100	-	.	Parent=FBgn0262743.1.mrna1;Target=FBgn0262743.1 1381 2307 +
ChrX	stalkie_big_nohaplotig	exon	39097666	39098694	100	-	.	Parent=FBgn0262743.1.mrna1;Target=FBgn0262743.1 352 1380 +
ChrX	stalkie_big_nohaplotig	exon	39098780	39099021	100	-	.	Parent=FBgn0262743.1.mrna1;Target=FBgn0262743.1 110 351 +
ChrX	stalkie_big_nohaplotig	exon	39103051	39103158	99	-	.	Parent=FBgn0262743.1.mrna1;Target=FBgn0262743.1 1 109 +
ChrX	stalkie_big_nohaplotig	CDS	39095745	39096143	.	-	0	Parent=FBgn0262743.1.mrna1;Target=FBgn0262743.1 2308 2706 +
ChrX	stalkie_big_nohaplotig	CDS	39096671	39097597	.	-	0	Parent=FBgn0262743.1.mrna1;Target=FBgn0262743.1 1381 2307 +
ChrX	stalkie_big_nohaplotig	CDS	39097666	39098694	.	-	0	Parent=FBgn0262743.1.mrna1;Target=FBgn0262743.1 352 1380 +
ChrX	stalkie_big_nohaplotig	CDS	39098780	39099021	.	-	2	Parent=FBgn0262743.1.mrna1;Target=FBgn0262743.1 110 351 +
ChrX	stalkie_big_nohaplotig	CDS	39103051	39103108	.	-	0	Parent=FBgn0262743.1.mrna1;Target=FBgn0262743.1 52 109 +
ChrX	gffcl	locus	39110311	39120374	.	+	.	ID=RLOC_00002327;geneIDs=FBgn0032880.1.path1;transcripts=FBgn0032880.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39110311	39120374	.	+	.	ID=FBgn0032880.1.mrna1;geneID=FBgn0032880.1.path1;Name=FBgn0032880.1;Dir=sensecoverage=100.0;identity=100.0;matches=2010;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002327
ChrX	stalkie_big_nohaplotig	exon	39110311	39110475	100	+	.	Parent=FBgn0032880.1.mrna1;Target=FBgn0032880.1 1 165 +
ChrX	stalkie_big_nohaplotig	exon	39112401	39112595	100	+	.	Parent=FBgn0032880.1.mrna1;Target=FBgn0032880.1 166 360 +
ChrX	stalkie_big_nohaplotig	exon	39117507	39118495	100	+	.	Parent=FBgn0032880.1.mrna1;Target=FBgn0032880.1 361 1349 +
ChrX	stalkie_big_nohaplotig	exon	39119647	39119806	100	+	.	Parent=FBgn0032880.1.mrna1;Target=FBgn0032880.1 1350 1509 +
ChrX	stalkie_big_nohaplotig	exon	39119874	39120374	100	+	.	Parent=FBgn0032880.1.mrna1;Target=FBgn0032880.1 1510 2010 +
ChrX	stalkie_big_nohaplotig	CDS	39110311	39110475	.	+	0	Parent=FBgn0032880.1.mrna1;Target=FBgn0032880.1 1 165 +
ChrX	stalkie_big_nohaplotig	CDS	39112401	39112595	.	+	0	Parent=FBgn0032880.1.mrna1;Target=FBgn0032880.1 166 360 +
ChrX	stalkie_big_nohaplotig	CDS	39117507	39118495	.	+	0	Parent=FBgn0032880.1.mrna1;Target=FBgn0032880.1 361 1349 +
ChrX	stalkie_big_nohaplotig	CDS	39119647	39119806	.	+	1	Parent=FBgn0032880.1.mrna1;Target=FBgn0032880.1 1350 1509 +
ChrX	stalkie_big_nohaplotig	CDS	39119874	39120374	.	+	0	Parent=FBgn0032880.1.mrna1;Target=FBgn0032880.1 1510 2010 +
ChrX	gffcl	locus	39124670	39128518	.	+	.	ID=RLOC_00002328;geneIDs=FBgn0032879.1.path1;transcripts=FBgn0032879.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39124670	39128518	.	+	.	ID=FBgn0032879.1.mrna1;geneID=FBgn0032879.1.path1;Name=FBgn0032879.1;Dir=sensecoverage=100.0;identity=99.7;matches=2016;mismatches=0;indels=6;unknowns=0;locus=RLOC_00002328
ChrX	stalkie_big_nohaplotig	exon	39124670	39124783	95	+	.	Parent=FBgn0032879.1.mrna1;Target=FBgn0032879.1 1 120 +
ChrX	stalkie_big_nohaplotig	exon	39124851	39125075	100	+	.	Parent=FBgn0032879.1.mrna1;Target=FBgn0032879.1 121 345 +
ChrX	stalkie_big_nohaplotig	exon	39126180	39126353	100	+	.	Parent=FBgn0032879.1.mrna1;Target=FBgn0032879.1 346 519 +
ChrX	stalkie_big_nohaplotig	exon	39126641	39126899	100	+	.	Parent=FBgn0032879.1.mrna1;Target=FBgn0032879.1 520 778 +
ChrX	stalkie_big_nohaplotig	exon	39126981	39127347	100	+	.	Parent=FBgn0032879.1.mrna1;Target=FBgn0032879.1 779 1145 +
ChrX	stalkie_big_nohaplotig	exon	39127422	39127643	100	+	.	Parent=FBgn0032879.1.mrna1;Target=FBgn0032879.1 1146 1367 +
ChrX	stalkie_big_nohaplotig	exon	39127723	39127942	100	+	.	Parent=FBgn0032879.1.mrna1;Target=FBgn0032879.1 1368 1587 +
ChrX	stalkie_big_nohaplotig	exon	39128014	39128192	100	+	.	Parent=FBgn0032879.1.mrna1;Target=FBgn0032879.1 1588 1766 +
ChrX	stalkie_big_nohaplotig	exon	39128263	39128518	100	+	.	Parent=FBgn0032879.1.mrna1;Target=FBgn0032879.1 1767 2022 +
ChrX	stalkie_big_nohaplotig	CDS	39124670	39124783	.	+	0	Parent=FBgn0032879.1.mrna1;Target=FBgn0032879.1 1 120 +
ChrX	stalkie_big_nohaplotig	CDS	39124851	39125075	.	+	0	Parent=FBgn0032879.1.mrna1;Target=FBgn0032879.1 121 345 +
ChrX	stalkie_big_nohaplotig	CDS	39126180	39126353	.	+	0	Parent=FBgn0032879.1.mrna1;Target=FBgn0032879.1 346 519 +
ChrX	stalkie_big_nohaplotig	CDS	39126641	39126899	.	+	0	Parent=FBgn0032879.1.mrna1;Target=FBgn0032879.1 520 778 +
ChrX	stalkie_big_nohaplotig	CDS	39126981	39127347	.	+	2	Parent=FBgn0032879.1.mrna1;Target=FBgn0032879.1 779 1145 +
ChrX	stalkie_big_nohaplotig	CDS	39127422	39127643	.	+	1	Parent=FBgn0032879.1.mrna1;Target=FBgn0032879.1 1146 1367 +
ChrX	stalkie_big_nohaplotig	CDS	39127723	39127942	.	+	1	Parent=FBgn0032879.1.mrna1;Target=FBgn0032879.1 1368 1587 +
ChrX	stalkie_big_nohaplotig	CDS	39128014	39128192	.	+	0	Parent=FBgn0032879.1.mrna1;Target=FBgn0032879.1 1588 1766 +
ChrX	stalkie_big_nohaplotig	CDS	39128263	39128518	.	+	1	Parent=FBgn0032879.1.mrna1;Target=FBgn0032879.1 1767 2022 +
ChrX	gffcl	locus	39292359	39292667	.	+	.	ID=RLOC_00002329;geneIDs=comp144974_c0_seq1.path1,comp144974_c0_seq1.path2;transcripts=comp144974_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39292359	39292667	.	+	.	ID=comp144974_c0_seq1.mrna1;geneID=comp144974_c0_seq1.path1;Name=comp144974_c0_seq1;Dir=indeterminatecoverage=65.9;identity=100.0;matches=309;mismatches=0;indels=0;unknowns=0;Target=comp144974_c0_seq1 309 1 .;CDS_Target=comp144974_c0_seq1 123 1 .;locus=RLOC_00002329
ChrX	stalkie_big_nohaplotig	exon	39292359	39292667	100	+	.	Parent=comp144974_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	39292359	39292481	.	+	0	Parent=comp144974_c0_seq1.mrna1
ChrX	gffcl	locus	39293969	39294487	.	-	.	ID=RLOC_00002330;geneIDs=comp86342_c0_seq1.path1;transcripts=comp86342_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39293969	39294487	.	-	.	ID=comp86342_c0_seq1.mrna1;geneID=comp86342_c0_seq1.path1;Name=comp86342_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=519;mismatches=0;indels=0;unknowns=0;Target=comp86342_c0_seq1 519 1 .;CDS_Target=comp86342_c0_seq1 273 121 .;locus=RLOC_00002330
ChrX	stalkie_big_nohaplotig	exon	39293969	39294487	100	-	.	Parent=comp86342_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	39294215	39294367	.	-	0	Parent=comp86342_c0_seq1.mrna1
ChrX	gffcl	locus	39300538	39306294	.	-	.	ID=RLOC_00002331;geneIDs=FBgn0027885.1.path1;transcripts=FBgn0027885.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39300538	39306294	.	-	.	ID=FBgn0027885.1.mrna1;geneID=FBgn0027885.1.path1;Name=FBgn0027885.1;Dir=sensecoverage=100.0;identity=100.0;matches=1659;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002331
ChrX	stalkie_big_nohaplotig	exon	39300538	39300819	100	-	.	Parent=FBgn0027885.1.mrna1;Target=FBgn0027885.1 1378 1659 +
ChrX	stalkie_big_nohaplotig	exon	39301402	39301588	100	-	.	Parent=FBgn0027885.1.mrna1;Target=FBgn0027885.1 1191 1377 +
ChrX	stalkie_big_nohaplotig	exon	39301652	39301854	100	-	.	Parent=FBgn0027885.1.mrna1;Target=FBgn0027885.1 988 1190 +
ChrX	stalkie_big_nohaplotig	exon	39302543	39302743	100	-	.	Parent=FBgn0027885.1.mrna1;Target=FBgn0027885.1 787 987 +
ChrX	stalkie_big_nohaplotig	exon	39302820	39303023	100	-	.	Parent=FBgn0027885.1.mrna1;Target=FBgn0027885.1 583 786 +
ChrX	stalkie_big_nohaplotig	exon	39303449	39303622	100	-	.	Parent=FBgn0027885.1.mrna1;Target=FBgn0027885.1 409 582 +
ChrX	stalkie_big_nohaplotig	exon	39305703	39305855	100	-	.	Parent=FBgn0027885.1.mrna1;Target=FBgn0027885.1 256 408 +
ChrX	stalkie_big_nohaplotig	exon	39305962	39306123	100	-	.	Parent=FBgn0027885.1.mrna1;Target=FBgn0027885.1 94 255 +
ChrX	stalkie_big_nohaplotig	exon	39306202	39306294	100	-	.	Parent=FBgn0027885.1.mrna1;Target=FBgn0027885.1 1 93 +
ChrX	stalkie_big_nohaplotig	CDS	39300538	39300819	.	-	0	Parent=FBgn0027885.1.mrna1;Target=FBgn0027885.1 1378 1659 +
ChrX	stalkie_big_nohaplotig	CDS	39301402	39301588	.	-	1	Parent=FBgn0027885.1.mrna1;Target=FBgn0027885.1 1191 1377 +
ChrX	stalkie_big_nohaplotig	CDS	39301652	39301854	.	-	0	Parent=FBgn0027885.1.mrna1;Target=FBgn0027885.1 988 1190 +
ChrX	stalkie_big_nohaplotig	CDS	39302543	39302743	.	-	0	Parent=FBgn0027885.1.mrna1;Target=FBgn0027885.1 787 987 +
ChrX	stalkie_big_nohaplotig	CDS	39302820	39303023	.	-	0	Parent=FBgn0027885.1.mrna1;Target=FBgn0027885.1 583 786 +
ChrX	stalkie_big_nohaplotig	CDS	39303449	39303622	.	-	0	Parent=FBgn0027885.1.mrna1;Target=FBgn0027885.1 409 582 +
ChrX	stalkie_big_nohaplotig	CDS	39305703	39305855	.	-	0	Parent=FBgn0027885.1.mrna1;Target=FBgn0027885.1 256 408 +
ChrX	stalkie_big_nohaplotig	CDS	39305962	39306123	.	-	0	Parent=FBgn0027885.1.mrna1;Target=FBgn0027885.1 94 255 +
ChrX	stalkie_big_nohaplotig	CDS	39306202	39306294	.	-	0	Parent=FBgn0027885.1.mrna1;Target=FBgn0027885.1 1 93 +
ChrX	gffcl	locus	39316834	39317860	.	-	.	ID=RLOC_00002333;geneIDs=FBgn0032640.1.path1;transcripts=FBgn0032640.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39316834	39317860	.	-	.	ID=FBgn0032640.1.mrna1;geneID=FBgn0032640.1.path1;Name=FBgn0032640.1;Dir=sensecoverage=100.0;identity=100.0;matches=972;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002333
ChrX	stalkie_big_nohaplotig	exon	39316834	39317212	100	-	.	Parent=FBgn0032640.1.mrna1;Target=FBgn0032640.1 594 972 +
ChrX	stalkie_big_nohaplotig	exon	39317268	39317860	100	-	.	Parent=FBgn0032640.1.mrna1;Target=FBgn0032640.1 1 593 +
ChrX	stalkie_big_nohaplotig	CDS	39316834	39317212	.	-	1	Parent=FBgn0032640.1.mrna1;Target=FBgn0032640.1 594 972 +
ChrX	stalkie_big_nohaplotig	CDS	39317268	39317860	.	-	0	Parent=FBgn0032640.1.mrna1;Target=FBgn0032640.1 1 593 +
ChrX	gffcl	locus	39320795	39342275	.	+	.	ID=RLOC_00002334;geneIDs=FBgn0250785.1.path1;transcripts=FBgn0250785.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39320795	39342275	.	+	.	ID=FBgn0250785.1.mrna1;geneID=FBgn0250785.1.path1;Name=FBgn0250785.1;Dir=sensecoverage=100.0;identity=100.0;matches=1938;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002334
ChrX	stalkie_big_nohaplotig	exon	39320795	39320921	100	+	.	Parent=FBgn0250785.1.mrna1;Target=FBgn0250785.1 1 127 +
ChrX	stalkie_big_nohaplotig	exon	39321120	39321232	100	+	.	Parent=FBgn0250785.1.mrna1;Target=FBgn0250785.1 128 240 +
ChrX	stalkie_big_nohaplotig	exon	39335870	39336022	100	+	.	Parent=FBgn0250785.1.mrna1;Target=FBgn0250785.1 241 393 +
ChrX	stalkie_big_nohaplotig	exon	39336086	39336577	100	+	.	Parent=FBgn0250785.1.mrna1;Target=FBgn0250785.1 394 885 +
ChrX	stalkie_big_nohaplotig	exon	39338741	39338839	100	+	.	Parent=FBgn0250785.1.mrna1;Target=FBgn0250785.1 886 984 +
ChrX	stalkie_big_nohaplotig	exon	39338913	39339074	100	+	.	Parent=FBgn0250785.1.mrna1;Target=FBgn0250785.1 985 1146 +
ChrX	stalkie_big_nohaplotig	exon	39339171	39339381	100	+	.	Parent=FBgn0250785.1.mrna1;Target=FBgn0250785.1 1147 1357 +
ChrX	stalkie_big_nohaplotig	exon	39340999	39341169	100	+	.	Parent=FBgn0250785.1.mrna1;Target=FBgn0250785.1 1358 1528 +
ChrX	stalkie_big_nohaplotig	exon	39341236	39341396	100	+	.	Parent=FBgn0250785.1.mrna1;Target=FBgn0250785.1 1529 1689 +
ChrX	stalkie_big_nohaplotig	exon	39341962	39342036	100	+	.	Parent=FBgn0250785.1.mrna1;Target=FBgn0250785.1 1690 1764 +
ChrX	stalkie_big_nohaplotig	exon	39342102	39342275	100	+	.	Parent=FBgn0250785.1.mrna1;Target=FBgn0250785.1 1765 1938 +
ChrX	stalkie_big_nohaplotig	CDS	39320795	39320921	.	+	0	Parent=FBgn0250785.1.mrna1;Target=FBgn0250785.1 1 127 +
ChrX	stalkie_big_nohaplotig	CDS	39321120	39321232	.	+	2	Parent=FBgn0250785.1.mrna1;Target=FBgn0250785.1 128 240 +
ChrX	stalkie_big_nohaplotig	CDS	39335870	39336022	.	+	0	Parent=FBgn0250785.1.mrna1;Target=FBgn0250785.1 241 393 +
ChrX	stalkie_big_nohaplotig	CDS	39336086	39336577	.	+	0	Parent=FBgn0250785.1.mrna1;Target=FBgn0250785.1 394 885 +
ChrX	stalkie_big_nohaplotig	CDS	39338741	39338839	.	+	0	Parent=FBgn0250785.1.mrna1;Target=FBgn0250785.1 886 984 +
ChrX	stalkie_big_nohaplotig	CDS	39338913	39339074	.	+	0	Parent=FBgn0250785.1.mrna1;Target=FBgn0250785.1 985 1146 +
ChrX	stalkie_big_nohaplotig	CDS	39339171	39339381	.	+	0	Parent=FBgn0250785.1.mrna1;Target=FBgn0250785.1 1147 1357 +
ChrX	stalkie_big_nohaplotig	CDS	39340999	39341169	.	+	2	Parent=FBgn0250785.1.mrna1;Target=FBgn0250785.1 1358 1528 +
ChrX	stalkie_big_nohaplotig	CDS	39341236	39341396	.	+	2	Parent=FBgn0250785.1.mrna1;Target=FBgn0250785.1 1529 1689 +
ChrX	stalkie_big_nohaplotig	CDS	39341962	39342036	.	+	0	Parent=FBgn0250785.1.mrna1;Target=FBgn0250785.1 1690 1764 +
ChrX	stalkie_big_nohaplotig	CDS	39342102	39342275	.	+	0	Parent=FBgn0250785.1.mrna1;Target=FBgn0250785.1 1765 1938 +
ChrX	gffcl	locus	39336917	39337930	.	+	.	ID=RLOC_00002335;geneIDs=comp150679_c0_seq1.path1;transcripts=comp150679_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39336917	39337930	.	+	.	ID=comp150679_c0_seq1.mrna1;geneID=comp150679_c0_seq1.path1;Name=comp150679_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1014;mismatches=0;indels=1;unknowns=0;Target=comp150679_c0_seq1 1015 1 .;CDS_Target=comp150679_c0_seq1 185 3 .;locus=RLOC_00002335
ChrX	stalkie_big_nohaplotig	exon	39336917	39337930	99	+	.	Parent=comp150679_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	39336919	39337101	.	+	0	Parent=comp150679_c0_seq1.mrna1
ChrX	gffcl	locus	39344477	39345332	.	-	.	ID=RLOC_00002336;geneIDs=comp151795_c1_seq1.path1;transcripts=comp151795_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39344477	39345332	.	-	.	ID=comp151795_c1_seq1.mrna1;geneID=comp151795_c1_seq1.path1;Name=comp151795_c1_seq1;Dir=indeterminatecoverage=98.3;identity=99.5;matches=853;mismatches=3;indels=1;unknowns=0;Target=comp151795_c1_seq1 870 14 .;CDS_Target=comp151795_c1_seq1 88 14 .;locus=RLOC_00002336
ChrX	stalkie_big_nohaplotig	exon	39344477	39345332	99	-	.	Parent=comp151795_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	39345258	39345332	.	-	0	Parent=comp151795_c1_seq1.mrna1
ChrX	gffcl	locus	39346628	39347139	.	-	.	ID=RLOC_00002337;geneIDs=FBgn0032884.1.path1;transcripts=FBgn0032884.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39346628	39347139	.	-	.	ID=FBgn0032884.1.mrna1;geneID=FBgn0032884.1.path1;Name=FBgn0032884.1;Dir=sensecoverage=100.0;identity=100.0;matches=396;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002337
ChrX	stalkie_big_nohaplotig	exon	39346628	39346754	100	-	.	Parent=FBgn0032884.1.mrna1;Target=FBgn0032884.1 270 396 +
ChrX	stalkie_big_nohaplotig	exon	39346813	39347054	100	-	.	Parent=FBgn0032884.1.mrna1;Target=FBgn0032884.1 28 269 +
ChrX	stalkie_big_nohaplotig	exon	39347113	39347139	100	-	.	Parent=FBgn0032884.1.mrna1;Target=FBgn0032884.1 1 27 +
ChrX	stalkie_big_nohaplotig	CDS	39346628	39346754	.	-	1	Parent=FBgn0032884.1.mrna1;Target=FBgn0032884.1 270 396 +
ChrX	stalkie_big_nohaplotig	CDS	39346813	39347054	.	-	0	Parent=FBgn0032884.1.mrna1;Target=FBgn0032884.1 28 269 +
ChrX	stalkie_big_nohaplotig	CDS	39347113	39347139	.	-	0	Parent=FBgn0032884.1.mrna1;Target=FBgn0032884.1 1 27 +
ChrX	gffcl	locus	39432423	39433502	.	.	.	ID=RLOC_00002339;geneIDs=comp64754_c0_seq1.path1,comp106173_c0_seq1.path1;transcripts=comp64754_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39432423	39433092	.	+	.	ID=comp64754_c0_seq1.mrna1;geneID=comp64754_c0_seq1.path1;Name=comp64754_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=670;mismatches=0;indels=0;unknowns=0;Target=comp64754_c0_seq1 670 1 .;CDS_Target=comp64754_c0_seq1 97 2 .;locus=RLOC_00002339
ChrX	stalkie_big_nohaplotig	exon	39432423	39433092	100	+	.	Parent=comp64754_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	39432424	39432519	.	+	0	Parent=comp64754_c0_seq1.mrna1
ChrX	gffcl	locus	39454570	39455670	.	+	.	ID=RLOC_00002340;geneIDs=comp938075_c0_seq1.path1;transcripts=comp938075_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39454570	39455670	.	+	.	ID=comp938075_c0_seq1.mrna1;geneID=comp938075_c0_seq1.path1;Name=comp938075_c0_seq1;Dir=antisensecoverage=97.5;identity=96.5;matches=873;mismatches=29;indels=3;unknowns=0;Target=comp938075_c0_seq1 744 902 .;locus=RLOC_00002340
ChrX	stalkie_big_nohaplotig	exon	39454570	39454740	98	+	.	Parent=comp938075_c0_seq1.mrna1;Target=comp938075_c0_seq1 732 902 -
ChrX	stalkie_big_nohaplotig	exon	39454862	39455368	96	+	.	Parent=comp938075_c0_seq1.mrna1;Target=comp938075_c0_seq1 228 731 -
ChrX	stalkie_big_nohaplotig	exon	39455444	39455670	95	+	.	Parent=comp938075_c0_seq1.mrna1;Target=comp938075_c0_seq1 1 227 -
ChrX	stalkie_big_nohaplotig	CDS	39454570	39454728	.	+	0	Parent=comp938075_c0_seq1.mrna1
ChrX	gffcl	locus	39475936	39480583	.	+	.	ID=RLOC_00002342;geneIDs=FBgn0032883.1.path1;transcripts=FBgn0032883.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39475936	39480583	.	+	.	ID=FBgn0032883.1.mrna1;geneID=FBgn0032883.1.path1;Name=FBgn0032883.1;Dir=sensecoverage=100.0;identity=99.9;matches=2256;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002342
ChrX	stalkie_big_nohaplotig	exon	39475936	39476201	99	+	.	Parent=FBgn0032883.1.mrna1;Target=FBgn0032883.1 1 266 +
ChrX	stalkie_big_nohaplotig	exon	39476265	39476427	100	+	.	Parent=FBgn0032883.1.mrna1;Target=FBgn0032883.1 267 429 +
ChrX	stalkie_big_nohaplotig	exon	39477133	39477887	99	+	.	Parent=FBgn0032883.1.mrna1;Target=FBgn0032883.1 430 1184 +
ChrX	stalkie_big_nohaplotig	exon	39477956	39478132	100	+	.	Parent=FBgn0032883.1.mrna1;Target=FBgn0032883.1 1185 1361 +
ChrX	stalkie_big_nohaplotig	exon	39479363	39479731	100	+	.	Parent=FBgn0032883.1.mrna1;Target=FBgn0032883.1 1362 1730 +
ChrX	stalkie_big_nohaplotig	exon	39479796	39479909	100	+	.	Parent=FBgn0032883.1.mrna1;Target=FBgn0032883.1 1731 1844 +
ChrX	stalkie_big_nohaplotig	exon	39479973	39480092	100	+	.	Parent=FBgn0032883.1.mrna1;Target=FBgn0032883.1 1845 1964 +
ChrX	stalkie_big_nohaplotig	exon	39480158	39480304	100	+	.	Parent=FBgn0032883.1.mrna1;Target=FBgn0032883.1 1965 2111 +
ChrX	stalkie_big_nohaplotig	exon	39480377	39480493	100	+	.	Parent=FBgn0032883.1.mrna1;Target=FBgn0032883.1 2112 2228 +
ChrX	stalkie_big_nohaplotig	exon	39480553	39480583	100	+	.	Parent=FBgn0032883.1.mrna1;Target=FBgn0032883.1 2229 2259 +
ChrX	stalkie_big_nohaplotig	CDS	39475936	39476201	.	+	0	Parent=FBgn0032883.1.mrna1;Target=FBgn0032883.1 1 266 +
ChrX	stalkie_big_nohaplotig	CDS	39476265	39476427	.	+	1	Parent=FBgn0032883.1.mrna1;Target=FBgn0032883.1 267 429 +
ChrX	stalkie_big_nohaplotig	CDS	39477133	39477887	.	+	0	Parent=FBgn0032883.1.mrna1;Target=FBgn0032883.1 430 1184 +
ChrX	stalkie_big_nohaplotig	CDS	39477956	39478132	.	+	1	Parent=FBgn0032883.1.mrna1;Target=FBgn0032883.1 1185 1361 +
ChrX	stalkie_big_nohaplotig	CDS	39479363	39479731	.	+	1	Parent=FBgn0032883.1.mrna1;Target=FBgn0032883.1 1362 1730 +
ChrX	stalkie_big_nohaplotig	CDS	39479796	39479909	.	+	1	Parent=FBgn0032883.1.mrna1;Target=FBgn0032883.1 1731 1844 +
ChrX	stalkie_big_nohaplotig	CDS	39479973	39480092	.	+	1	Parent=FBgn0032883.1.mrna1;Target=FBgn0032883.1 1845 1964 +
ChrX	stalkie_big_nohaplotig	CDS	39480158	39480304	.	+	1	Parent=FBgn0032883.1.mrna1;Target=FBgn0032883.1 1965 2111 +
ChrX	stalkie_big_nohaplotig	CDS	39480377	39480493	.	+	1	Parent=FBgn0032883.1.mrna1;Target=FBgn0032883.1 2112 2228 +
ChrX	stalkie_big_nohaplotig	CDS	39480553	39480583	.	+	1	Parent=FBgn0032883.1.mrna1;Target=FBgn0032883.1 2229 2259 +
ChrX	gffcl	locus	39482678	39488429	.	-	.	ID=RLOC_00002343;geneIDs=FBgn0032882.1.path1;transcripts=FBgn0032882.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39482678	39488429	.	-	.	ID=FBgn0032882.1.mrna1;geneID=FBgn0032882.1.path1;Name=FBgn0032882.1;Dir=sensecoverage=100.0;identity=99.9;matches=1778;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002343
ChrX	stalkie_big_nohaplotig	exon	39482678	39482799	100	-	.	Parent=FBgn0032882.1.mrna1;Target=FBgn0032882.1 1658 1779 +
ChrX	stalkie_big_nohaplotig	exon	39482877	39482990	100	-	.	Parent=FBgn0032882.1.mrna1;Target=FBgn0032882.1 1544 1657 +
ChrX	stalkie_big_nohaplotig	exon	39486246	39486980	100	-	.	Parent=FBgn0032882.1.mrna1;Target=FBgn0032882.1 809 1543 +
ChrX	stalkie_big_nohaplotig	exon	39487436	39487625	100	-	.	Parent=FBgn0032882.1.mrna1;Target=FBgn0032882.1 619 808 +
ChrX	stalkie_big_nohaplotig	exon	39487696	39487842	100	-	.	Parent=FBgn0032882.1.mrna1;Target=FBgn0032882.1 472 618 +
ChrX	stalkie_big_nohaplotig	exon	39487894	39488219	100	-	.	Parent=FBgn0032882.1.mrna1;Target=FBgn0032882.1 146 471 +
ChrX	stalkie_big_nohaplotig	exon	39488285	39488429	99	-	.	Parent=FBgn0032882.1.mrna1;Target=FBgn0032882.1 1 145 +
ChrX	stalkie_big_nohaplotig	CDS	39482678	39482799	.	-	2	Parent=FBgn0032882.1.mrna1;Target=FBgn0032882.1 1658 1779 +
ChrX	stalkie_big_nohaplotig	CDS	39482877	39482990	.	-	2	Parent=FBgn0032882.1.mrna1;Target=FBgn0032882.1 1544 1657 +
ChrX	stalkie_big_nohaplotig	CDS	39486246	39486980	.	-	2	Parent=FBgn0032882.1.mrna1;Target=FBgn0032882.1 809 1543 +
ChrX	stalkie_big_nohaplotig	CDS	39487436	39487625	.	-	0	Parent=FBgn0032882.1.mrna1;Target=FBgn0032882.1 619 808 +
ChrX	stalkie_big_nohaplotig	CDS	39487696	39487842	.	-	0	Parent=FBgn0032882.1.mrna1;Target=FBgn0032882.1 472 618 +
ChrX	stalkie_big_nohaplotig	CDS	39487894	39488219	.	-	2	Parent=FBgn0032882.1.mrna1;Target=FBgn0032882.1 146 471 +
ChrX	stalkie_big_nohaplotig	CDS	39488285	39488429	.	-	0	Parent=FBgn0032882.1.mrna1;Target=FBgn0032882.1 1 145 +
ChrX	gffcl	locus	39494690	39496133	.	.	.	ID=RLOC_00002344;geneIDs=comp152270_c0_seq1.path1,comp157982_c0_seq1.path1;transcripts=comp157982_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39494690	39495601	.	-	.	ID=comp157982_c0_seq1.mrna1;geneID=comp157982_c0_seq1.path1;Name=comp157982_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=912;mismatches=0;indels=0;unknowns=0;Target=comp157982_c0_seq1 912 1 .;CDS_Target=comp157982_c0_seq1 728 483 .;locus=RLOC_00002344
ChrX	stalkie_big_nohaplotig	exon	39494690	39495601	100	-	.	Parent=comp157982_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	39494874	39495119	.	-	0	Parent=comp157982_c0_seq1.mrna1
ChrX	gffcl	locus	39505982	39520918	.	-	.	ID=RLOC_00002345;geneIDs=FBgn0261804.path1;transcripts=FBgn0261804.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39505982	39520918	.	-	.	ID=FBgn0261804.mrna1;geneID=FBgn0261804.path1;Name=FBgn0261804;Dir=sensecoverage=100.0;identity=99.7;matches=592;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002345
ChrX	stalkie_big_nohaplotig	exon	39505982	39506207	100	-	.	Parent=FBgn0261804.mrna1;Target=FBgn0261804 369 594 +
ChrX	stalkie_big_nohaplotig	exon	39519978	39520053	100	-	.	Parent=FBgn0261804.mrna1;Target=FBgn0261804 293 368 +
ChrX	stalkie_big_nohaplotig	exon	39520627	39520918	99	-	.	Parent=FBgn0261804.mrna1;Target=FBgn0261804 1 292 +
ChrX	stalkie_big_nohaplotig	CDS	39505982	39506207	.	-	1	Parent=FBgn0261804.mrna1;Target=FBgn0261804 369 594 +
ChrX	stalkie_big_nohaplotig	CDS	39519978	39520053	.	-	2	Parent=FBgn0261804.mrna1;Target=FBgn0261804 293 368 +
ChrX	stalkie_big_nohaplotig	CDS	39520627	39520918	.	-	0	Parent=FBgn0261804.mrna1;Target=FBgn0261804 1 292 +
ChrX	gffcl	locus	39521033	39521615	.	-	.	ID=RLOC_00002346;geneIDs=comp153104_c0_seq1.path1;transcripts=comp153104_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39521033	39521615	.	-	.	ID=comp153104_c0_seq1.mrna1;geneID=comp153104_c0_seq1.path1;Name=comp153104_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=582;mismatches=1;indels=0;unknowns=0;Target=comp153104_c0_seq1 583 1 .;CDS_Target=comp153104_c0_seq1 177 1 .;locus=RLOC_00002346
ChrX	stalkie_big_nohaplotig	exon	39521033	39521615	99	-	.	Parent=comp153104_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	39521439	39521615	.	-	0	Parent=comp153104_c0_seq1.mrna1
ChrX	gffcl	locus	39553731	39555800	.	-	.	ID=RLOC_00002347;geneIDs=FBgn0032673.1.path1;transcripts=FBgn0032673.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39553731	39555800	.	-	.	ID=FBgn0032673.1.mrna1;geneID=FBgn0032673.1.path1;Name=FBgn0032673.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=2064;mismatches=6;indels=0;unknowns=0;Target=FBgn0032673.1 2070 1 .;locus=RLOC_00002347
ChrX	stalkie_big_nohaplotig	exon	39553731	39555800	99	-	.	Parent=FBgn0032673.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	39553731	39555800	.	-	0	Parent=FBgn0032673.1.mrna1
ChrX	gffcl	locus	39568992	39570109	.	-	.	ID=RLOC_00002348;geneIDs=comp153328_c0_seq1.path1;transcripts=comp153328_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39568992	39570109	.	-	.	ID=comp153328_c0_seq1.mrna1;geneID=comp153328_c0_seq1.path1;Name=comp153328_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=940;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002348
ChrX	stalkie_big_nohaplotig	exon	39568992	39569287	100	-	.	Parent=comp153328_c0_seq1.mrna1;Target=comp153328_c0_seq1 1 296 -
ChrX	stalkie_big_nohaplotig	exon	39569463	39570109	99	-	.	Parent=comp153328_c0_seq1.mrna1;Target=comp153328_c0_seq1 297 943 -
ChrX	stalkie_big_nohaplotig	CDS	39569217	39569287	.	-	2	Parent=comp153328_c0_seq1.mrna1;Target=comp153328_c0_seq1 226 296 .
ChrX	stalkie_big_nohaplotig	CDS	39569463	39570108	.	-	0	Parent=comp153328_c0_seq1.mrna1;Target=comp153328_c0_seq1 297 942 .
ChrX	gffcl	locus	39680608	39682408	.	+	.	ID=RLOC_00002349;geneIDs=ORF502.path1;transcripts=ORF502.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39680608	39682408	.	+	.	ID=ORF502.mrna1;geneID=ORF502.path1;Name=ORF502;Dir=sensecoverage=99.5;identity=98.5;matches=1685;mismatches=13;indels=12;unknowns=0;locus=RLOC_00002349
ChrX	stalkie_big_nohaplotig	exon	39680608	39680715	100	+	.	Parent=ORF502.mrna1;Target=ORF502 10 117 +
ChrX	stalkie_big_nohaplotig	exon	39680819	39682408	98	+	.	Parent=ORF502.mrna1;Target=ORF502 118 1719 +
ChrX	stalkie_big_nohaplotig	CDS	39680608	39680715	.	+	0	Parent=ORF502.mrna1;Target=ORF502 10 117 +
ChrX	stalkie_big_nohaplotig	CDS	39680819	39682408	.	+	0	Parent=ORF502.mrna1;Target=ORF502 118 1719 +
ChrX	gffcl	locus	39719733	39720506	.	-	.	ID=RLOC_00002350;geneIDs=comp170768_c0_seq1.path1;transcripts=comp170768_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39719733	39720506	.	-	.	ID=comp170768_c0_seq1.mrna1;geneID=comp170768_c0_seq1.path1;Name=comp170768_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.5;matches=770;mismatches=4;indels=0;unknowns=0;Target=comp170768_c0_seq1 776 3 .;CDS_Target=comp170768_c0_seq1 143 3 .;locus=RLOC_00002350
ChrX	stalkie_big_nohaplotig	exon	39719733	39720506	99	-	.	Parent=comp170768_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	39720366	39720506	.	-	0	Parent=comp170768_c0_seq1.mrna1
ChrX	gffcl	locus	39755448	39755975	.	+	.	ID=RLOC_00002351;geneIDs=comp130117_c1_seq1.path1;transcripts=comp130117_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39755448	39755975	.	+	.	ID=comp130117_c1_seq1.mrna1;geneID=comp130117_c1_seq1.path1;Name=comp130117_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=524;mismatches=4;indels=0;unknowns=0;Target=comp130117_c1_seq1 528 1 .;CDS_Target=comp130117_c1_seq1 526 209 .;locus=RLOC_00002351
ChrX	stalkie_big_nohaplotig	exon	39755448	39755975	99	+	.	Parent=comp130117_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	39755656	39755973	.	+	0	Parent=comp130117_c1_seq1.mrna1
ChrX	gffcl	locus	39757653	39758486	.	+	.	ID=RLOC_00002352;geneIDs=ORF2605.path1;transcripts=ORF2605.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39757653	39758486	.	+	.	ID=ORF2605.mrna1;geneID=ORF2605.path1;Name=ORF2605;Dir=indeterminatecoverage=100.0;identity=99.4;matches=829;mismatches=5;indels=0;unknowns=0;Target=ORF2605 834 1 .;locus=RLOC_00002352
ChrX	stalkie_big_nohaplotig	exon	39757653	39758486	99	+	.	Parent=ORF2605.mrna1
ChrX	stalkie_big_nohaplotig	CDS	39757653	39758486	.	+	0	Parent=ORF2605.mrna1
ChrX	gffcl	locus	39764703	39895265	.	-	.	ID=RLOC_00002353;geneIDs=comp152866_c0_seq1.path1,comp160604_c0_seq1.path1;transcripts=comp160604_c0_seq1.mrna1,comp152866_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39764703	39766180	.	-	.	ID=comp160604_c0_seq1.mrna1;geneID=comp160604_c0_seq1.path1;Name=comp160604_c0_seq1;Dir=indeterminatecoverage=94.2;identity=91.2;matches=1165;mismatches=52;indels=61;unknowns=0;Target=comp160604_c0_seq1 1170 985 .;locus=RLOC_00002353
ChrX	stalkie_big_nohaplotig	exon	39764703	39765608	93	-	.	Parent=comp160604_c0_seq1.mrna1;Target=comp160604_c0_seq1 1311 391 .
ChrX	stalkie_big_nohaplotig	exon	39765844	39766180	84	-	.	Parent=comp160604_c0_seq1.mrna1;Target=comp160604_c0_seq1 390 60 .
ChrX	stalkie_big_nohaplotig	CDS	39764844	39765029	.	-	0	Parent=comp160604_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39765162	39895265	.	-	.	ID=comp152866_c0_seq1.mrna1;geneID=comp152866_c0_seq1.path1;Name=comp152866_c0_seq1;Dir=antisensecoverage=94.9;identity=99.5;matches=1093;mismatches=6;indels=0;unknowns=0;locus=RLOC_00002353
ChrX	stalkie_big_nohaplotig	exon	39765162	39765171	100	-	.	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 77 86 -
ChrX	stalkie_big_nohaplotig	exon	39768403	39768411	100	-	.	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 87 95 -
ChrX	stalkie_big_nohaplotig	exon	39770999	39771001	100	-	.	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 96 98 -
ChrX	stalkie_big_nohaplotig	exon	39781742	39781746	100	-	.	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 99 103 -
ChrX	stalkie_big_nohaplotig	exon	39782342	39782349	100	-	.	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 104 111 -
ChrX	stalkie_big_nohaplotig	exon	39782360	39782361	100	-	.	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 165 166 -
ChrX	stalkie_big_nohaplotig	exon	39789717	39789727	100	-	.	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 167 177 -
ChrX	stalkie_big_nohaplotig	exon	39805162	39805167	100	-	.	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 178 183 -
ChrX	stalkie_big_nohaplotig	exon	39811916	39811921	100	-	.	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 184 189 -
ChrX	stalkie_big_nohaplotig	exon	39834524	39834530	100	-	.	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 190 196 -
ChrX	stalkie_big_nohaplotig	exon	39834732	39834734	100	-	.	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 197 199 -
ChrX	stalkie_big_nohaplotig	exon	39838447	39838448	100	-	.	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 200 201 -
ChrX	stalkie_big_nohaplotig	exon	39841631	39841632	100	-	.	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 202 203 -
ChrX	stalkie_big_nohaplotig	exon	39849312	39849316	100	-	.	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 204 208 -
ChrX	stalkie_big_nohaplotig	exon	39870444	39870447	100	-	.	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 209 212 -
ChrX	stalkie_big_nohaplotig	exon	39880869	39880872	100	-	.	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 213 216 -
ChrX	stalkie_big_nohaplotig	exon	39882611	39882625	100	-	.	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 217 231 -
ChrX	stalkie_big_nohaplotig	exon	39893578	39893790	99	-	.	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 232 444 -
ChrX	stalkie_big_nohaplotig	exon	39894095	39894221	100	-	.	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 445 571 -
ChrX	stalkie_big_nohaplotig	exon	39894524	39894615	100	-	.	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 572 663 -
ChrX	stalkie_big_nohaplotig	exon	39894702	39895265	99	-	.	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 664 1227 -
ChrX	stalkie_big_nohaplotig	CDS	39894532	39894615	.	-	0	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 580 663 .
ChrX	stalkie_big_nohaplotig	CDS	39894702	39895178	.	-	0	Parent=comp152866_c0_seq1.mrna1;Target=comp152866_c0_seq1 664 1140 .
ChrX	gffcl	locus	39768730	39770806	.	-	.	ID=RLOC_00002354;geneIDs=comp155795_c0_seq1.path1;transcripts=comp155795_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39768730	39770806	.	-	.	ID=comp155795_c0_seq1.mrna1;geneID=comp155795_c0_seq1.path1;Name=comp155795_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.8;matches=2011;mismatches=65;indels=90;unknowns=0;Target=comp155795_c0_seq1 2165 1 .;CDS_Target=comp155795_c0_seq1 396 229 .;locus=RLOC_00002354
ChrX	stalkie_big_nohaplotig	exon	39768730	39770806	92	-	.	Parent=comp155795_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	39770414	39770578	.	-	0	Parent=comp155795_c0_seq1.mrna1
ChrX	gffcl	locus	39819388	39820776	.	+	.	ID=RLOC_00002355;geneIDs=comp158883_c0_seq1.path1;transcripts=comp158883_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39819388	39820776	.	+	.	ID=comp158883_c0_seq1.mrna1;geneID=comp158883_c0_seq1.path1;Name=comp158883_c0_seq1;Dir=indeterminatecoverage=98.8;identity=98.6;matches=1371;mismatches=18;indels=1;unknowns=0;Target=comp158883_c0_seq1 1407 18 .;CDS_Target=comp158883_c0_seq1 1270 173 .;locus=RLOC_00002355
ChrX	stalkie_big_nohaplotig	exon	39819388	39820776	98	+	.	Parent=comp158883_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	39819543	39820640	.	+	0	Parent=comp158883_c0_seq1.mrna1
ChrX	gffcl	locus	39889851	40115688	.	.	.	ID=RLOC_00002356;geneIDs=comp154586_c0_seq1.path2,comp159484_c1_seq1.path1;transcripts=comp159484_c1_seq1.mrna1,comp154586_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	39889851	40115688	.	+	.	ID=comp159484_c1_seq1.mrna1;geneID=comp159484_c1_seq1.path1;Name=comp159484_c1_seq1;Dir=indeterminatecoverage=100.0;identity=95.0;matches=1125;mismatches=50;indels=9;unknowns=0;Target=comp159484_c1_seq1 806 789 .;locus=RLOC_00002356
ChrX	stalkie_big_nohaplotig	exon	39889851	39889936	81	+	.	Parent=comp159484_c1_seq1.mrna1;Target=comp159484_c1_seq1 86 1 .
ChrX	stalkie_big_nohaplotig	exon	40114599	40115688	96	+	.	Parent=comp159484_c1_seq1.mrna1;Target=comp159484_c1_seq1 1182 88 .
ChrX	stalkie_big_nohaplotig	CDS	40115298	40115315	.	+	0	Parent=comp159484_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40114565	40114608	.	-	.	ID=comp154586_c0_seq1.mrna2;geneID=comp154586_c0_seq1.path2;Name=comp154586_c0_seq1;Dir=indeterminatecoverage=4.3;identity=100.0;matches=44;mismatches=0;indels=0;unknowns=0;Target=comp154586_c0_seq1 984 941 .;CDS_Target=comp154586_c0_seq1 982 941 .;locus=RLOC_00002356
ChrX	stalkie_big_nohaplotig	exon	40114565	40114608	100	-	.	Parent=comp154586_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	40114567	40114608	.	-	0	Parent=comp154586_c0_seq1.mrna2
ChrX	gffcl	locus	39912812	39913059	.	+	.	ID=RLOC_00002357;geneIDs=comp51865_c0_seq1.path1;transcripts=comp51865_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	39912812	39913059	.	+	.	ID=comp51865_c0_seq1.mrna1;geneID=comp51865_c0_seq1.path1;Name=comp51865_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=244;mismatches=4;indels=0;unknowns=0;Target=comp51865_c0_seq1 248 1 .;CDS_Target=comp51865_c0_seq1 11 3 .;locus=RLOC_00002357
ChrX	stalkie_big_nohaplotig	exon	39912812	39913059	98	+	.	Parent=comp51865_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	39912814	39912822	.	+	0	Parent=comp51865_c0_seq1.mrna1
ChrX	gffcl	locus	40054836	40113439	.	+	.	ID=RLOC_00002358;geneIDs=FBgn0000636.1.path1,comp160534_c0_seq1.path2;transcripts=FBgn0000636.1.mrna1,comp160534_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	40054836	40092439	.	+	.	ID=FBgn0000636.1.mrna1;geneID=FBgn0000636.1.path1;Name=FBgn0000636.1;Dir=sensecoverage=93.9;identity=100.0;matches=1625;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002358
ChrX	stalkie_big_nohaplotig	exon	40054836	40055153	100	+	.	Parent=FBgn0000636.1.mrna1;Target=FBgn0000636.1 107 424 +
ChrX	stalkie_big_nohaplotig	exon	40057356	40057697	100	+	.	Parent=FBgn0000636.1.mrna1;Target=FBgn0000636.1 425 766 +
ChrX	stalkie_big_nohaplotig	exon	40057777	40058211	100	+	.	Parent=FBgn0000636.1.mrna1;Target=FBgn0000636.1 767 1201 +
ChrX	stalkie_big_nohaplotig	exon	40090850	40090880	100	+	.	Parent=FBgn0000636.1.mrna1;Target=FBgn0000636.1 1202 1232 +
ChrX	stalkie_big_nohaplotig	exon	40091941	40092439	100	+	.	Parent=FBgn0000636.1.mrna1;Target=FBgn0000636.1 1233 1731 +
ChrX	stalkie_big_nohaplotig	CDS	40054838	40055153	.	+	0	Parent=FBgn0000636.1.mrna1;Target=FBgn0000636.1 109 424 +
ChrX	stalkie_big_nohaplotig	CDS	40057356	40057697	.	+	2	Parent=FBgn0000636.1.mrna1;Target=FBgn0000636.1 425 766 +
ChrX	stalkie_big_nohaplotig	CDS	40057777	40058211	.	+	2	Parent=FBgn0000636.1.mrna1;Target=FBgn0000636.1 767 1201 +
ChrX	stalkie_big_nohaplotig	CDS	40090850	40090880	.	+	2	Parent=FBgn0000636.1.mrna1;Target=FBgn0000636.1 1202 1232 +
ChrX	stalkie_big_nohaplotig	CDS	40091941	40092439	.	+	1	Parent=FBgn0000636.1.mrna1;Target=FBgn0000636.1 1233 1731 +
ChrX	stalkie_big_nohaplotig	mRNA	40054839	40113439	.	+	.	ID=comp160534_c0_seq1.mrna2;geneID=comp160534_c0_seq1.path2;Name=comp160534_c0_seq1;Dir=antisensecoverage=38.4;identity=100.0;matches=1542;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002358
ChrX	stalkie_big_nohaplotig	exon	40054839	40055153	100	+	.	Parent=comp160534_c0_seq1.mrna2;Target=comp160534_c0_seq1 3178 3492 -
ChrX	stalkie_big_nohaplotig	exon	40057356	40057697	100	+	.	Parent=comp160534_c0_seq1.mrna2;Target=comp160534_c0_seq1 2836 3177 -
ChrX	stalkie_big_nohaplotig	exon	40057777	40058211	100	+	.	Parent=comp160534_c0_seq1.mrna2;Target=comp160534_c0_seq1 2401 2835 -
ChrX	stalkie_big_nohaplotig	exon	40090850	40090880	100	+	.	Parent=comp160534_c0_seq1.mrna2;Target=comp160534_c0_seq1 2370 2400 -
ChrX	stalkie_big_nohaplotig	exon	40108619	40108901	100	+	.	Parent=comp160534_c0_seq1.mrna2;Target=comp160534_c0_seq1 2087 2369 -
ChrX	stalkie_big_nohaplotig	exon	40113304	40113439	100	+	.	Parent=comp160534_c0_seq1.mrna2;Target=comp160534_c0_seq1 1951 2086 -
ChrX	gffcl	locus	40066073	40076109	.	+	.	ID=RLOC_00002359;geneIDs=FBgn0033365.1.path1;transcripts=FBgn0033365.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40066073	40076109	.	+	.	ID=FBgn0033365.1.mrna1;geneID=FBgn0033365.1.path1;Name=FBgn0033365.1;Dir=sensecoverage=100.0;identity=99.6;matches=2515;mismatches=11;indels=0;unknowns=0;locus=RLOC_00002359
ChrX	stalkie_big_nohaplotig	exon	40066073	40067466	99	+	.	Parent=FBgn0033365.1.mrna1;Target=FBgn0033365.1 1 1394 +
ChrX	stalkie_big_nohaplotig	exon	40067517	40067644	100	+	.	Parent=FBgn0033365.1.mrna1;Target=FBgn0033365.1 1395 1522 +
ChrX	stalkie_big_nohaplotig	exon	40068515	40068745	100	+	.	Parent=FBgn0033365.1.mrna1;Target=FBgn0033365.1 1523 1753 +
ChrX	stalkie_big_nohaplotig	exon	40073086	40073197	99	+	.	Parent=FBgn0033365.1.mrna1;Target=FBgn0033365.1 1754 1865 +
ChrX	stalkie_big_nohaplotig	exon	40073493	40073746	98	+	.	Parent=FBgn0033365.1.mrna1;Target=FBgn0033365.1 1866 2119 +
ChrX	stalkie_big_nohaplotig	exon	40074514	40074652	100	+	.	Parent=FBgn0033365.1.mrna1;Target=FBgn0033365.1 2120 2258 +
ChrX	stalkie_big_nohaplotig	exon	40075778	40075932	100	+	.	Parent=FBgn0033365.1.mrna1;Target=FBgn0033365.1 2259 2413 +
ChrX	stalkie_big_nohaplotig	exon	40075997	40076109	100	+	.	Parent=FBgn0033365.1.mrna1;Target=FBgn0033365.1 2414 2526 +
ChrX	stalkie_big_nohaplotig	CDS	40066208	40067466	.	+	0	Parent=FBgn0033365.1.mrna1;Target=FBgn0033365.1 136 1394 +
ChrX	stalkie_big_nohaplotig	CDS	40067517	40067644	.	+	1	Parent=FBgn0033365.1.mrna1;Target=FBgn0033365.1 1395 1522 +
ChrX	stalkie_big_nohaplotig	CDS	40068515	40068745	.	+	2	Parent=FBgn0033365.1.mrna1;Target=FBgn0033365.1 1523 1753 +
ChrX	stalkie_big_nohaplotig	CDS	40073086	40073197	.	+	2	Parent=FBgn0033365.1.mrna1;Target=FBgn0033365.1 1754 1865 +
ChrX	stalkie_big_nohaplotig	CDS	40073493	40073746	.	+	1	Parent=FBgn0033365.1.mrna1;Target=FBgn0033365.1 1866 2119 +
ChrX	stalkie_big_nohaplotig	CDS	40074514	40074652	.	+	2	Parent=FBgn0033365.1.mrna1;Target=FBgn0033365.1 2120 2258 +
ChrX	stalkie_big_nohaplotig	CDS	40075778	40075932	.	+	1	Parent=FBgn0033365.1.mrna1;Target=FBgn0033365.1 2259 2413 +
ChrX	stalkie_big_nohaplotig	CDS	40075997	40076109	.	+	2	Parent=FBgn0033365.1.mrna1;Target=FBgn0033365.1 2414 2526 +
ChrX	gffcl	locus	40069849	40069939	.	-	.	ID=RLOC_00002360;geneIDs=comp159424_c1_seq1.path1;transcripts=comp159424_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40069849	40069939	.	-	.	ID=comp159424_c1_seq1.mrna1;geneID=comp159424_c1_seq1.path1;Name=comp159424_c1_seq1;Dir=indeterminatecoverage=7.9;identity=98.9;matches=90;mismatches=1;indels=0;unknowns=0;Target=comp159424_c1_seq1 91 1 .;locus=RLOC_00002360
ChrX	stalkie_big_nohaplotig	exon	40069849	40069939	98	-	.	Parent=comp159424_c1_seq1.mrna1
ChrX	gffcl	locus	40084564	40085859	.	-	.	ID=RLOC_00002361;geneIDs=comp153307_c0_seq1.path1;transcripts=comp153307_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40084564	40085859	.	-	.	ID=comp153307_c0_seq1.mrna1;geneID=comp153307_c0_seq1.path1;Name=comp153307_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.5;matches=1280;mismatches=16;indels=3;unknowns=0;Target=comp153307_c0_seq1 1299 1 .;CDS_Target=comp153307_c0_seq1 157 2 .;locus=RLOC_00002361
ChrX	stalkie_big_nohaplotig	exon	40084564	40085859	98	-	.	Parent=comp153307_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40085704	40085858	.	-	0	Parent=comp153307_c0_seq1.mrna1
ChrX	gffcl	locus	40086870	40088336	.	+	.	ID=RLOC_00002362;geneIDs=comp160156_c0_seq1.path1;transcripts=comp160156_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40086870	40088336	.	+	.	ID=comp160156_c0_seq1.mrna1;geneID=comp160156_c0_seq1.path1;Name=comp160156_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=1444;mismatches=22;indels=15;unknowns=0;Target=comp160156_c0_seq1 1480 1 .;CDS_Target=comp160156_c0_seq1 635 306 .;locus=RLOC_00002362
ChrX	stalkie_big_nohaplotig	exon	40086870	40088336	97	+	.	Parent=comp160156_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40087174	40087503	.	+	0	Parent=comp160156_c0_seq1.mrna1
ChrX	gffcl	locus	40127390	40128355	.	+	.	ID=RLOC_00002363;geneIDs=comp155296_c0_seq1.path1;transcripts=comp155296_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40127390	40128355	.	+	.	ID=comp155296_c0_seq1.mrna1;geneID=comp155296_c0_seq1.path1;Name=comp155296_c0_seq1;Dir=antisensecoverage=91.8;identity=96.0;matches=799;mismatches=17;indels=16;unknowns=0;locus=RLOC_00002363
ChrX	stalkie_big_nohaplotig	exon	40127390	40127634	92	+	.	Parent=comp155296_c0_seq1.mrna1;Target=comp155296_c0_seq1 649 900 -
ChrX	stalkie_big_nohaplotig	exon	40127711	40128145	97	+	.	Parent=comp155296_c0_seq1.mrna1;Target=comp155296_c0_seq1 212 648 -
ChrX	stalkie_big_nohaplotig	exon	40128214	40128355	95	+	.	Parent=comp155296_c0_seq1.mrna1;Target=comp155296_c0_seq1 75 211 -
ChrX	stalkie_big_nohaplotig	CDS	40128070	40128145	.	+	0	Parent=comp155296_c0_seq1.mrna1;Target=comp155296_c0_seq1 212 287 .
ChrX	stalkie_big_nohaplotig	CDS	40128214	40128251	.	+	2	Parent=comp155296_c0_seq1.mrna1;Target=comp155296_c0_seq1 174 211 .
ChrX	gffcl	locus	40139638	40140561	.	+	.	ID=RLOC_00002364;geneIDs=comp155298_c0_seq1.path1;transcripts=comp155298_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40139638	40140561	.	+	.	ID=comp155298_c0_seq1.mrna1;geneID=comp155298_c0_seq1.path1;Name=comp155298_c0_seq1;Dir=antisensecoverage=99.4;identity=99.0;matches=796;mismatches=4;indels=4;unknowns=0;locus=RLOC_00002364
ChrX	stalkie_big_nohaplotig	exon	40139638	40139790	98	+	.	Parent=comp155298_c0_seq1.mrna1;Target=comp155298_c0_seq1 653 807 -
ChrX	stalkie_big_nohaplotig	exon	40139844	40140226	99	+	.	Parent=comp155298_c0_seq1.mrna1;Target=comp155298_c0_seq1 270 652 -
ChrX	stalkie_big_nohaplotig	exon	40140296	40140561	98	+	.	Parent=comp155298_c0_seq1.mrna1;Target=comp155298_c0_seq1 6 269 -
ChrX	stalkie_big_nohaplotig	CDS	40139951	40140226	.	+	0	Parent=comp155298_c0_seq1.mrna1;Target=comp155298_c0_seq1 270 545 .
ChrX	stalkie_big_nohaplotig	CDS	40140296	40140454	.	+	0	Parent=comp155298_c0_seq1.mrna1;Target=comp155298_c0_seq1 111 269 .
ChrX	gffcl	locus	40143005	40144115	.	+	.	ID=RLOC_00002365;geneIDs=comp157646_c0_seq1.path1;transcripts=comp157646_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40143005	40144115	.	+	.	ID=comp157646_c0_seq1.mrna1;geneID=comp157646_c0_seq1.path1;Name=comp157646_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=960;mismatches=7;indels=0;unknowns=0;Target=comp157646_c0_seq1 349 287 .;locus=RLOC_00002365
ChrX	stalkie_big_nohaplotig	exon	40143005	40143858	99	+	.	Parent=comp157646_c0_seq1.mrna1;Target=comp157646_c0_seq1 854 1 .
ChrX	stalkie_big_nohaplotig	exon	40144003	40144115	99	+	.	Parent=comp157646_c0_seq1.mrna1;Target=comp157646_c0_seq1 967 855 .
ChrX	stalkie_big_nohaplotig	CDS	40143291	40143353	.	+	0	Parent=comp157646_c0_seq1.mrna1
ChrX	gffcl	locus	40195156	40216414	.	+	.	ID=RLOC_00002366;geneIDs=FBgn0261387.6.path1,FBgn0261387.8.path1,comp162108_c1_seq1.path1,comp162108_c1_seq1.path2;transcripts=FBgn0261387.6.mrna1,comp162108_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40195156	40197750	.	+	.	ID=FBgn0261387.6.mrna1;geneID=FBgn0261387.6.path1;Name=FBgn0261387.6;Dir=indeterminatecoverage=100.0;identity=99.5;matches=2583;mismatches=12;indels=0;unknowns=0;Target=FBgn0261387.6 2595 1 .;locus=RLOC_00002366
ChrX	stalkie_big_nohaplotig	exon	40195156	40197750	99	+	.	Parent=FBgn0261387.6.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40195156	40197750	.	+	0	Parent=FBgn0261387.6.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40196410	40216414	.	+	.	ID=comp162108_c1_seq1.mrna1;geneID=comp162108_c1_seq1.path1;Name=comp162108_c1_seq1;Dir=indeterminatecoverage=37.9;identity=76.7;matches=686;mismatches=193;indels=15;unknowns=0;Target=comp162108_c1_seq1 845 153 .;locus=RLOC_00002366
ChrX	stalkie_big_nohaplotig	exon	40196410	40197260	76	+	.	Parent=comp162108_c1_seq1.mrna1;Target=comp162108_c1_seq1 992 153 .
ChrX	stalkie_big_nohaplotig	exon	40208605	40208611	71	+	.	Parent=comp162108_c1_seq1.mrna1;Target=comp162108_c1_seq1 999 993 .
ChrX	stalkie_big_nohaplotig	exon	40210874	40210885	91	+	.	Parent=comp162108_c1_seq1.mrna1;Target=comp162108_c1_seq1 1011 1000 .
ChrX	stalkie_big_nohaplotig	exon	40213337	40213346	90	+	.	Parent=comp162108_c1_seq1.mrna1;Target=comp162108_c1_seq1 1033 1024 .
ChrX	stalkie_big_nohaplotig	exon	40216404	40216414	90	+	.	Parent=comp162108_c1_seq1.mrna1;Target=comp162108_c1_seq1 1044 1034 .
ChrX	stalkie_big_nohaplotig	CDS	40196410	40197113	.	+	0	Parent=comp162108_c1_seq1.mrna1
ChrX	gffcl	locus	40244265	40252624	.	-	.	ID=RLOC_00002367;geneIDs=comp168398_c0_seq1.path1;transcripts=comp168398_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40244265	40252624	.	-	.	ID=comp168398_c0_seq1.mrna1;geneID=comp168398_c0_seq1.path1;Name=comp168398_c0_seq1;Dir=sensecoverage=95.4;identity=100.0;matches=783;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002367
ChrX	stalkie_big_nohaplotig	exon	40244265	40244386	100	-	.	Parent=comp168398_c0_seq1.mrna1;Target=comp168398_c0_seq1 680 801 +
ChrX	stalkie_big_nohaplotig	exon	40244448	40244601	100	-	.	Parent=comp168398_c0_seq1.mrna1;Target=comp168398_c0_seq1 526 679 +
ChrX	stalkie_big_nohaplotig	exon	40244666	40244822	100	-	.	Parent=comp168398_c0_seq1.mrna1;Target=comp168398_c0_seq1 369 525 +
ChrX	stalkie_big_nohaplotig	exon	40244892	40244982	100	-	.	Parent=comp168398_c0_seq1.mrna1;Target=comp168398_c0_seq1 278 368 +
ChrX	stalkie_big_nohaplotig	exon	40245036	40245181	100	-	.	Parent=comp168398_c0_seq1.mrna1;Target=comp168398_c0_seq1 132 277 +
ChrX	stalkie_big_nohaplotig	exon	40252512	40252624	100	-	.	Parent=comp168398_c0_seq1.mrna1;Target=comp168398_c0_seq1 19 131 +
ChrX	stalkie_big_nohaplotig	CDS	40244549	40244601	.	-	2	Parent=comp168398_c0_seq1.mrna1;Target=comp168398_c0_seq1 526 578 +
ChrX	stalkie_big_nohaplotig	CDS	40244666	40244822	.	-	0	Parent=comp168398_c0_seq1.mrna1;Target=comp168398_c0_seq1 369 525 +
ChrX	stalkie_big_nohaplotig	CDS	40244892	40244982	.	-	1	Parent=comp168398_c0_seq1.mrna1;Target=comp168398_c0_seq1 278 368 +
ChrX	stalkie_big_nohaplotig	CDS	40245036	40245097	.	-	0	Parent=comp168398_c0_seq1.mrna1;Target=comp168398_c0_seq1 216 277 +
ChrX	gffcl	locus	40274943	41048194	.	-	.	ID=RLOC_00002368;geneIDs=comp117253_c0_seq1.path1,comp161516_c6_seq1.path1;transcripts=comp117253_c0_seq1.mrna1,comp161516_c6_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40274943	41048194	.	-	.	ID=comp117253_c0_seq1.mrna1;geneID=comp117253_c0_seq1.path1;Name=comp117253_c0_seq1;Dir=indeterminatecoverage=61.3;identity=100.0;matches=195;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002368
ChrX	stalkie_big_nohaplotig	exon	40274943	40274956	100	-	.	Parent=comp117253_c0_seq1.mrna1;Target=comp117253_c0_seq1 308 295 .
ChrX	stalkie_big_nohaplotig	exon	40283059	40283063	100	-	.	Parent=comp117253_c0_seq1.mrna1;Target=comp117253_c0_seq1 294 290 .
ChrX	stalkie_big_nohaplotig	exon	40292794	40292795	100	-	.	Parent=comp117253_c0_seq1.mrna1;Target=comp117253_c0_seq1 289 288 .
ChrX	stalkie_big_nohaplotig	exon	40297221	40297231	100	-	.	Parent=comp117253_c0_seq1.mrna1;Target=comp117253_c0_seq1 282 272 .
ChrX	stalkie_big_nohaplotig	exon	40301019	40301023	100	-	.	Parent=comp117253_c0_seq1.mrna1;Target=comp117253_c0_seq1 271 267 .
ChrX	stalkie_big_nohaplotig	exon	40307528	40307532	100	-	.	Parent=comp117253_c0_seq1.mrna1;Target=comp117253_c0_seq1 266 262 .
ChrX	stalkie_big_nohaplotig	exon	40314091	40314100	100	-	.	Parent=comp117253_c0_seq1.mrna1;Target=comp117253_c0_seq1 261 252 .
ChrX	stalkie_big_nohaplotig	exon	40325203	40325205	100	-	.	Parent=comp117253_c0_seq1.mrna1;Target=comp117253_c0_seq1 250 248 .
ChrX	stalkie_big_nohaplotig	exon	41048056	41048194	100	-	.	Parent=comp117253_c0_seq1.mrna1;Target=comp117253_c0_seq1 247 109 .
ChrX	stalkie_big_nohaplotig	CDS	40283061	40283063	.	-	0	Parent=comp117253_c0_seq1.mrna1;Target=comp117253_c0_seq1 292 290 .
ChrX	stalkie_big_nohaplotig	CDS	40292794	40292795	.	-	2	Parent=comp117253_c0_seq1.mrna1;Target=comp117253_c0_seq1 289 288 .
ChrX	stalkie_big_nohaplotig	CDS	40297221	40297231	.	-	1	Parent=comp117253_c0_seq1.mrna1;Target=comp117253_c0_seq1 282 272 .
ChrX	stalkie_big_nohaplotig	CDS	40301019	40301023	.	-	0	Parent=comp117253_c0_seq1.mrna1;Target=comp117253_c0_seq1 271 267 .
ChrX	stalkie_big_nohaplotig	CDS	40307528	40307532	.	-	2	Parent=comp117253_c0_seq1.mrna1;Target=comp117253_c0_seq1 266 262 .
ChrX	stalkie_big_nohaplotig	CDS	40314091	40314100	.	-	0	Parent=comp117253_c0_seq1.mrna1;Target=comp117253_c0_seq1 261 252 .
ChrX	stalkie_big_nohaplotig	CDS	40325203	40325205	.	-	0	Parent=comp117253_c0_seq1.mrna1;Target=comp117253_c0_seq1 250 248 .
ChrX	stalkie_big_nohaplotig	CDS	41048056	41048148	.	-	0	Parent=comp117253_c0_seq1.mrna1;Target=comp117253_c0_seq1 247 155 .
ChrX	stalkie_big_nohaplotig	mRNA	40318939	40334800	.	-	.	ID=comp161516_c6_seq1.mrna1;geneID=comp161516_c6_seq1.path1;Name=comp161516_c6_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=4023;mismatches=41;indels=5;unknowns=0;locus=RLOC_00002368
ChrX	stalkie_big_nohaplotig	exon	40318939	40320749	98	-	.	Parent=comp161516_c6_seq1.mrna1;Target=comp161516_c6_seq1 1 1809 -
ChrX	stalkie_big_nohaplotig	exon	40320811	40321001	100	-	.	Parent=comp161516_c6_seq1.mrna1;Target=comp161516_c6_seq1 1810 2000 -
ChrX	stalkie_big_nohaplotig	exon	40322361	40322501	99	-	.	Parent=comp161516_c6_seq1.mrna1;Target=comp161516_c6_seq1 2001 2141 -
ChrX	stalkie_big_nohaplotig	exon	40323872	40325102	98	-	.	Parent=comp161516_c6_seq1.mrna1;Target=comp161516_c6_seq1 2142 3375 -
ChrX	stalkie_big_nohaplotig	exon	40325166	40325560	99	-	.	Parent=comp161516_c6_seq1.mrna1;Target=comp161516_c6_seq1 3376 3770 -
ChrX	stalkie_big_nohaplotig	exon	40325620	40325717	100	-	.	Parent=comp161516_c6_seq1.mrna1;Target=comp161516_c6_seq1 3771 3868 -
ChrX	stalkie_big_nohaplotig	exon	40325796	40325961	99	-	.	Parent=comp161516_c6_seq1.mrna1;Target=comp161516_c6_seq1 3869 4034 -
ChrX	stalkie_big_nohaplotig	exon	40334768	40334800	100	-	.	Parent=comp161516_c6_seq1.mrna1;Target=comp161516_c6_seq1 4035 4067 -
ChrX	stalkie_big_nohaplotig	CDS	40320092	40320749	.	-	1	Parent=comp161516_c6_seq1.mrna1;Target=comp161516_c6_seq1 1152 1809 .
ChrX	stalkie_big_nohaplotig	CDS	40320811	40321001	.	-	0	Parent=comp161516_c6_seq1.mrna1;Target=comp161516_c6_seq1 1810 2000 .
ChrX	stalkie_big_nohaplotig	CDS	40322361	40322501	.	-	0	Parent=comp161516_c6_seq1.mrna1;Target=comp161516_c6_seq1 2001 2141 .
ChrX	stalkie_big_nohaplotig	CDS	40323872	40325102	.	-	1	Parent=comp161516_c6_seq1.mrna1;Target=comp161516_c6_seq1 2142 3375 .
ChrX	stalkie_big_nohaplotig	CDS	40325166	40325560	.	-	0	Parent=comp161516_c6_seq1.mrna1;Target=comp161516_c6_seq1 3376 3770 .
ChrX	stalkie_big_nohaplotig	CDS	40325620	40325717	.	-	2	Parent=comp161516_c6_seq1.mrna1;Target=comp161516_c6_seq1 3771 3868 .
ChrX	stalkie_big_nohaplotig	CDS	40325796	40325961	.	-	0	Parent=comp161516_c6_seq1.mrna1;Target=comp161516_c6_seq1 3869 4034 .
ChrX	stalkie_big_nohaplotig	CDS	40334768	40334800	.	-	0	Parent=comp161516_c6_seq1.mrna1;Target=comp161516_c6_seq1 4035 4067 .
ChrX	gffcl	locus	40288067	40292577	.	-	.	ID=RLOC_00002370;geneIDs=AAEL012899.1.path1;transcripts=AAEL012899.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40288067	40292577	.	-	.	ID=AAEL012899.1.mrna1;geneID=AAEL012899.1.path1;Name=AAEL012899.1;Dir=sensecoverage=100.0;identity=99.1;matches=675;mismatches=6;indels=0;unknowns=0;locus=RLOC_00002370
ChrX	stalkie_big_nohaplotig	exon	40288067	40288201	99	-	.	Parent=AAEL012899.1.mrna1;Target=AAEL012899.1 547 681 +
ChrX	stalkie_big_nohaplotig	exon	40288268	40288523	99	-	.	Parent=AAEL012899.1.mrna1;Target=AAEL012899.1 291 546 +
ChrX	stalkie_big_nohaplotig	exon	40288577	40288825	98	-	.	Parent=AAEL012899.1.mrna1;Target=AAEL012899.1 42 290 +
ChrX	stalkie_big_nohaplotig	exon	40292537	40292577	100	-	.	Parent=AAEL012899.1.mrna1;Target=AAEL012899.1 1 41 +
ChrX	stalkie_big_nohaplotig	CDS	40288067	40288201	.	-	0	Parent=AAEL012899.1.mrna1;Target=AAEL012899.1 547 681 +
ChrX	stalkie_big_nohaplotig	CDS	40288268	40288523	.	-	1	Parent=AAEL012899.1.mrna1;Target=AAEL012899.1 291 546 +
ChrX	stalkie_big_nohaplotig	CDS	40288577	40288825	.	-	1	Parent=AAEL012899.1.mrna1;Target=AAEL012899.1 42 290 +
ChrX	stalkie_big_nohaplotig	CDS	40292537	40292577	.	-	0	Parent=AAEL012899.1.mrna1;Target=AAEL012899.1 1 41 +
ChrX	gffcl	locus	40289217	40289539	.	+	.	ID=RLOC_00002371;geneIDs=FBgn0031668.1.path1;transcripts=FBgn0031668.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40289217	40289539	.	+	.	ID=FBgn0031668.1.mrna1;geneID=FBgn0031668.1.path1;Name=FBgn0031668.1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=319;mismatches=4;indels=1;unknowns=0;Target=FBgn0031668.1 324 1 .;CDS_Target=FBgn0031668.1 80 3 .;locus=RLOC_00002371
ChrX	stalkie_big_nohaplotig	exon	40289217	40289539	98	+	.	Parent=FBgn0031668.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40289219	40289295	.	+	0	Parent=FBgn0031668.1.mrna1
ChrX	gffcl	locus	40307847	40308760	.	-	.	ID=RLOC_00002373;geneIDs=FBgn0000826.1.path1;transcripts=FBgn0000826.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40307847	40308760	.	-	.	ID=FBgn0000826.1.mrna1;geneID=FBgn0000826.1.path1;Name=FBgn0000826.1;Dir=sensecoverage=100.0;identity=99.3;matches=846;mismatches=6;indels=0;unknowns=0;locus=RLOC_00002373
ChrX	stalkie_big_nohaplotig	exon	40307847	40308518	99	-	.	Parent=FBgn0000826.1.mrna1;Target=FBgn0000826.1 181 852 +
ChrX	stalkie_big_nohaplotig	exon	40308581	40308760	98	-	.	Parent=FBgn0000826.1.mrna1;Target=FBgn0000826.1 1 180 +
ChrX	stalkie_big_nohaplotig	CDS	40307847	40308518	.	-	0	Parent=FBgn0000826.1.mrna1;Target=FBgn0000826.1 181 852 +
ChrX	stalkie_big_nohaplotig	CDS	40308581	40308760	.	-	0	Parent=FBgn0000826.1.mrna1;Target=FBgn0000826.1 1 180 +
ChrX	gffcl	locus	40311736	40313824	.	-	.	ID=RLOC_00002374;geneIDs=comp157156_c0_seq1.path1;transcripts=comp157156_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40311736	40313824	.	-	.	ID=comp157156_c0_seq1.mrna1;geneID=comp157156_c0_seq1.path1;Name=comp157156_c0_seq1;Dir=sensecoverage=99.8;identity=88.1;matches=890;mismatches=45;indels=75;unknowns=0;Target=comp157156_c0_seq1 1 114 +;locus=RLOC_00002374
ChrX	stalkie_big_nohaplotig	exon	40311736	40311964	97	-	.	Parent=comp157156_c0_seq1.mrna1;Target=comp157156_c0_seq1 782 1010 +
ChrX	stalkie_big_nohaplotig	exon	40312480	40312759	95	-	.	Parent=comp157156_c0_seq1.mrna1;Target=comp157156_c0_seq1 502 781 +
ChrX	stalkie_big_nohaplotig	exon	40313399	40313824	79	-	.	Parent=comp157156_c0_seq1.mrna1;Target=comp157156_c0_seq1 1 501 +
ChrX	stalkie_big_nohaplotig	CDS	40313711	40313824	.	-	0	Parent=comp157156_c0_seq1.mrna1
ChrX	gffcl	locus	40314562	40316177	.	+	.	ID=RLOC_00002375;geneIDs=FBgn0032929.1.path1;transcripts=FBgn0032929.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40314562	40316177	.	+	.	ID=FBgn0032929.1.mrna1;geneID=FBgn0032929.1.path1;Name=FBgn0032929.1;Dir=sensecoverage=100.0;identity=99.4;matches=1542;mismatches=10;indels=0;unknowns=2;locus=RLOC_00002375
ChrX	stalkie_big_nohaplotig	exon	40314562	40315534	99	+	.	Parent=FBgn0032929.1.mrna1;Target=FBgn0032929.1 1 973 +
ChrX	stalkie_big_nohaplotig	exon	40315597	40316177	99	+	.	Parent=FBgn0032929.1.mrna1;Target=FBgn0032929.1 974 1554 +
ChrX	stalkie_big_nohaplotig	CDS	40314562	40315534	.	+	0	Parent=FBgn0032929.1.mrna1;Target=FBgn0032929.1 1 973 +
ChrX	stalkie_big_nohaplotig	CDS	40315597	40316177	.	+	2	Parent=FBgn0032929.1.mrna1;Target=FBgn0032929.1 974 1554 +
ChrX	gffcl	locus	40341655	40342346	.	-	.	ID=RLOC_00002376;geneIDs=comp156591_c0_seq1.path6;transcripts=comp156591_c0_seq1.mrna6
ChrX	stalkie_big_nohaplotig	mRNA	40341655	40342346	.	-	.	ID=comp156591_c0_seq1.mrna6;geneID=comp156591_c0_seq1.path6;Name=comp156591_c0_seq1;Dir=indeterminatecoverage=89.4;identity=97.9;matches=683;mismatches=8;indels=7;unknowns=0;Target=comp156591_c0_seq1 780 84 .;CDS_Target=comp156591_c0_seq1 105 85 .;locus=RLOC_00002376
ChrX	stalkie_big_nohaplotig	exon	40341655	40342346	97	-	.	Parent=comp156591_c0_seq1.mrna6
ChrX	stalkie_big_nohaplotig	CDS	40342326	40342345	.	-	0	Parent=comp156591_c0_seq1.mrna6
ChrX	gffcl	locus	40407583	40408624	.	-	.	ID=RLOC_00002377;geneIDs=FBgn0031717.1.path1;transcripts=FBgn0031717.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40407583	40408624	.	-	.	ID=FBgn0031717.1.mrna1;geneID=FBgn0031717.1.path1;Name=FBgn0031717.1;Dir=sensecoverage=100.0;identity=100.0;matches=828;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002377
ChrX	stalkie_big_nohaplotig	exon	40407583	40407633	100	-	.	Parent=FBgn0031717.1.mrna1;Target=FBgn0031717.1 778 828 +
ChrX	stalkie_big_nohaplotig	exon	40407720	40408261	100	-	.	Parent=FBgn0031717.1.mrna1;Target=FBgn0031717.1 236 777 +
ChrX	stalkie_big_nohaplotig	exon	40408329	40408456	100	-	.	Parent=FBgn0031717.1.mrna1;Target=FBgn0031717.1 108 235 +
ChrX	stalkie_big_nohaplotig	exon	40408518	40408624	100	-	.	Parent=FBgn0031717.1.mrna1;Target=FBgn0031717.1 1 107 +
ChrX	stalkie_big_nohaplotig	CDS	40407583	40407633	.	-	0	Parent=FBgn0031717.1.mrna1;Target=FBgn0031717.1 778 828 +
ChrX	stalkie_big_nohaplotig	CDS	40407720	40408261	.	-	2	Parent=FBgn0031717.1.mrna1;Target=FBgn0031717.1 236 777 +
ChrX	stalkie_big_nohaplotig	CDS	40408329	40408456	.	-	1	Parent=FBgn0031717.1.mrna1;Target=FBgn0031717.1 108 235 +
ChrX	stalkie_big_nohaplotig	CDS	40408518	40408624	.	-	0	Parent=FBgn0031717.1.mrna1;Target=FBgn0031717.1 1 107 +
ChrX	gffcl	locus	40422089	40422689	.	+	.	ID=RLOC_00002378;geneIDs=comp144957_c0_seq1.path1;transcripts=comp144957_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40422089	40422689	.	+	.	ID=comp144957_c0_seq1.mrna1;geneID=comp144957_c0_seq1.path1;Name=comp144957_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=450;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002378
ChrX	stalkie_big_nohaplotig	exon	40422089	40422265	100	+	.	Parent=comp144957_c0_seq1.mrna1;Target=comp144957_c0_seq1 1 177 +
ChrX	stalkie_big_nohaplotig	exon	40422353	40422514	100	+	.	Parent=comp144957_c0_seq1.mrna1;Target=comp144957_c0_seq1 178 339 +
ChrX	stalkie_big_nohaplotig	exon	40422576	40422689	97	+	.	Parent=comp144957_c0_seq1.mrna1;Target=comp144957_c0_seq1 340 453 +
ChrX	stalkie_big_nohaplotig	CDS	40422472	40422514	.	+	0	Parent=comp144957_c0_seq1.mrna1;Target=comp144957_c0_seq1 297 339 +
ChrX	stalkie_big_nohaplotig	CDS	40422576	40422649	.	+	2	Parent=comp144957_c0_seq1.mrna1;Target=comp144957_c0_seq1 340 413 +
ChrX	gffcl	locus	40424454	41817945	.	-	.	ID=RLOC_00002379;geneIDs=FBgn0031998.1.path1,comp117182_c0_seq1.path1;transcripts=comp117182_c0_seq1.mrna1,FBgn0031998.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40424454	41817945	.	-	.	ID=comp117182_c0_seq1.mrna1;geneID=comp117182_c0_seq1.path1;Name=comp117182_c0_seq1;Dir=indeterminatecoverage=75.6;identity=100.0;matches=192;mismatches=0;indels=0;unknowns=0;Target=comp117182_c0_seq1 127 20 .;locus=RLOC_00002379
ChrX	stalkie_big_nohaplotig	exon	40424454	40424459	100	-	.	Parent=comp117182_c0_seq1.mrna1;Target=comp117182_c0_seq1 210 205 .
ChrX	stalkie_big_nohaplotig	exon	40425464	40425468	100	-	.	Parent=comp117182_c0_seq1.mrna1;Target=comp117182_c0_seq1 204 200 .
ChrX	stalkie_big_nohaplotig	exon	40433596	40433602	100	-	.	Parent=comp117182_c0_seq1.mrna1;Target=comp117182_c0_seq1 199 193 .
ChrX	stalkie_big_nohaplotig	exon	40440892	40440899	100	-	.	Parent=comp117182_c0_seq1.mrna1;Target=comp117182_c0_seq1 192 185 .
ChrX	stalkie_big_nohaplotig	exon	40441864	40441866	100	-	.	Parent=comp117182_c0_seq1.mrna1;Target=comp117182_c0_seq1 184 182 .
ChrX	stalkie_big_nohaplotig	exon	40448628	40448631	100	-	.	Parent=comp117182_c0_seq1.mrna1;Target=comp117182_c0_seq1 181 178 .
ChrX	stalkie_big_nohaplotig	exon	40461145	40461148	100	-	.	Parent=comp117182_c0_seq1.mrna1;Target=comp117182_c0_seq1 177 174 .
ChrX	stalkie_big_nohaplotig	exon	41817791	41817945	100	-	.	Parent=comp117182_c0_seq1.mrna1;Target=comp117182_c0_seq1 173 19 .
ChrX	stalkie_big_nohaplotig	CDS	41817837	41817944	.	-	0	Parent=comp117182_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40439910	40467733	.	-	.	ID=FBgn0031998.1.mrna1;geneID=FBgn0031998.1.path1;Name=FBgn0031998.1;Dir=sensecoverage=100.0;identity=99.5;matches=2089;mismatches=4;indels=7;unknowns=0;locus=RLOC_00002379
ChrX	stalkie_big_nohaplotig	exon	40439910	40440042	100	-	.	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 1968 2100 +
ChrX	stalkie_big_nohaplotig	exon	40441714	40442405	99	-	.	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 1276 1967 +
ChrX	stalkie_big_nohaplotig	exon	40442474	40442732	100	-	.	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 1017 1275 +
ChrX	stalkie_big_nohaplotig	exon	40442793	40442947	100	-	.	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 862 1016 +
ChrX	stalkie_big_nohaplotig	exon	40443027	40443094	100	-	.	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 794 861 +
ChrX	stalkie_big_nohaplotig	exon	40443167	40443218	100	-	.	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 742 793 +
ChrX	stalkie_big_nohaplotig	exon	40443281	40443346	98	-	.	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 676 741 +
ChrX	stalkie_big_nohaplotig	exon	40444433	40444592	100	-	.	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 516 675 +
ChrX	stalkie_big_nohaplotig	exon	40444657	40444794	100	-	.	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 378 515 +
ChrX	stalkie_big_nohaplotig	exon	40444850	40444990	100	-	.	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 237 377 +
ChrX	stalkie_big_nohaplotig	exon	40459066	40459201	100	-	.	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 101 236 +
ChrX	stalkie_big_nohaplotig	exon	40467641	40467733	93	-	.	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 1 100 +
ChrX	stalkie_big_nohaplotig	CDS	40439910	40440042	.	-	1	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 1968 2100 +
ChrX	stalkie_big_nohaplotig	CDS	40441714	40442405	.	-	0	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 1276 1967 +
ChrX	stalkie_big_nohaplotig	CDS	40442474	40442732	.	-	1	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 1017 1275 +
ChrX	stalkie_big_nohaplotig	CDS	40442793	40442947	.	-	0	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 862 1016 +
ChrX	stalkie_big_nohaplotig	CDS	40443027	40443094	.	-	2	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 794 861 +
ChrX	stalkie_big_nohaplotig	CDS	40443167	40443218	.	-	0	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 742 793 +
ChrX	stalkie_big_nohaplotig	CDS	40443281	40443346	.	-	0	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 676 741 +
ChrX	stalkie_big_nohaplotig	CDS	40444433	40444592	.	-	1	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 516 675 +
ChrX	stalkie_big_nohaplotig	CDS	40444657	40444794	.	-	1	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 378 515 +
ChrX	stalkie_big_nohaplotig	CDS	40444850	40444990	.	-	1	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 237 377 +
ChrX	stalkie_big_nohaplotig	CDS	40459066	40459178	.	-	0	Parent=FBgn0031998.1.mrna1;Target=FBgn0031998.1 124 236 +
ChrX	gffcl	locus	40425969	40431131	.	-	.	ID=RLOC_00002380;geneIDs=FBgn0002525.1.path1;transcripts=FBgn0002525.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40425969	40431131	.	-	.	ID=FBgn0002525.1.mrna1;geneID=FBgn0002525.1.path1;Name=FBgn0002525.1;Dir=sensecoverage=100.0;identity=99.6;matches=1871;mismatches=7;indels=0;unknowns=0;locus=RLOC_00002380
ChrX	stalkie_big_nohaplotig	exon	40425969	40426688	99	-	.	Parent=FBgn0002525.1.mrna1;Target=FBgn0002525.1 1159 1878 +
ChrX	stalkie_big_nohaplotig	exon	40427918	40428621	99	-	.	Parent=FBgn0002525.1.mrna1;Target=FBgn0002525.1 455 1158 +
ChrX	stalkie_big_nohaplotig	exon	40430678	40431131	99	-	.	Parent=FBgn0002525.1.mrna1;Target=FBgn0002525.1 1 454 +
ChrX	stalkie_big_nohaplotig	CDS	40425969	40426688	.	-	0	Parent=FBgn0002525.1.mrna1;Target=FBgn0002525.1 1159 1878 +
ChrX	stalkie_big_nohaplotig	CDS	40427918	40428621	.	-	2	Parent=FBgn0002525.1.mrna1;Target=FBgn0002525.1 455 1158 +
ChrX	stalkie_big_nohaplotig	CDS	40430678	40431131	.	-	0	Parent=FBgn0002525.1.mrna1;Target=FBgn0002525.1 1 454 +
ChrX	gffcl	locus	40436588	40438395	.	+	.	ID=RLOC_00002381;geneIDs=FBgn0031997.1.path1;transcripts=FBgn0031997.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40436588	40438395	.	+	.	ID=FBgn0031997.1.mrna1;geneID=FBgn0031997.1.path1;Name=FBgn0031997.1;Dir=sensecoverage=100.0;identity=99.2;matches=1104;mismatches=9;indels=0;unknowns=0;locus=RLOC_00002381
ChrX	stalkie_big_nohaplotig	exon	40436588	40437033	99	+	.	Parent=FBgn0031997.1.mrna1;Target=FBgn0031997.1 1 446 +
ChrX	stalkie_big_nohaplotig	exon	40437092	40437258	99	+	.	Parent=FBgn0031997.1.mrna1;Target=FBgn0031997.1 447 613 +
ChrX	stalkie_big_nohaplotig	exon	40437343	40437549	99	+	.	Parent=FBgn0031997.1.mrna1;Target=FBgn0031997.1 614 820 +
ChrX	stalkie_big_nohaplotig	exon	40437615	40437751	98	+	.	Parent=FBgn0031997.1.mrna1;Target=FBgn0031997.1 821 957 +
ChrX	stalkie_big_nohaplotig	exon	40438240	40438395	98	+	.	Parent=FBgn0031997.1.mrna1;Target=FBgn0031997.1 958 1113 +
ChrX	stalkie_big_nohaplotig	CDS	40436588	40437033	.	+	0	Parent=FBgn0031997.1.mrna1;Target=FBgn0031997.1 1 446 +
ChrX	stalkie_big_nohaplotig	CDS	40437092	40437258	.	+	1	Parent=FBgn0031997.1.mrna1;Target=FBgn0031997.1 447 613 +
ChrX	stalkie_big_nohaplotig	CDS	40437343	40437549	.	+	2	Parent=FBgn0031997.1.mrna1;Target=FBgn0031997.1 614 820 +
ChrX	stalkie_big_nohaplotig	CDS	40437615	40437751	.	+	2	Parent=FBgn0031997.1.mrna1;Target=FBgn0031997.1 821 957 +
ChrX	stalkie_big_nohaplotig	CDS	40438240	40438395	.	+	0	Parent=FBgn0031997.1.mrna1;Target=FBgn0031997.1 958 1113 +
ChrX	gffcl	locus	40468349	40469037	.	-	.	ID=RLOC_00002382;geneIDs=comp119124_c0_seq1.path1;transcripts=comp119124_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40468349	40469037	.	-	.	ID=comp119124_c0_seq1.mrna1;geneID=comp119124_c0_seq1.path1;Name=comp119124_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=676;mismatches=4;indels=19;unknowns=0;Target=comp119124_c0_seq1 690 1 .;CDS_Target=comp119124_c0_seq1 542 360 .;locus=RLOC_00002382
ChrX	stalkie_big_nohaplotig	exon	40468349	40469037	96	-	.	Parent=comp119124_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40468497	40468680	.	-	0	Parent=comp119124_c0_seq1.mrna1
ChrX	gffcl	locus	40471699	40474613	.	+	.	ID=RLOC_00002383;geneIDs=comp157515_c0_seq1.path1;transcripts=comp157515_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40471699	40474613	.	+	.	ID=comp157515_c0_seq1.mrna1;geneID=comp157515_c0_seq1.path1;Name=comp157515_c0_seq1;Dir=sensecoverage=99.9;identity=98.1;matches=1437;mismatches=10;indels=18;unknowns=0;locus=RLOC_00002383
ChrX	stalkie_big_nohaplotig	exon	40471699	40471860	100	+	.	Parent=comp157515_c0_seq1.mrna1;Target=comp157515_c0_seq1 2 163 +
ChrX	stalkie_big_nohaplotig	exon	40471936	40472019	98	+	.	Parent=comp157515_c0_seq1.mrna1;Target=comp157515_c0_seq1 164 247 +
ChrX	stalkie_big_nohaplotig	exon	40472086	40472145	100	+	.	Parent=comp157515_c0_seq1.mrna1;Target=comp157515_c0_seq1 248 307 +
ChrX	stalkie_big_nohaplotig	exon	40472204	40472326	100	+	.	Parent=comp157515_c0_seq1.mrna1;Target=comp157515_c0_seq1 308 430 +
ChrX	stalkie_big_nohaplotig	exon	40472385	40472450	100	+	.	Parent=comp157515_c0_seq1.mrna1;Target=comp157515_c0_seq1 431 496 +
ChrX	stalkie_big_nohaplotig	exon	40473606	40473757	99	+	.	Parent=comp157515_c0_seq1.mrna1;Target=comp157515_c0_seq1 497 648 +
ChrX	stalkie_big_nohaplotig	exon	40473814	40474613	96	+	.	Parent=comp157515_c0_seq1.mrna1;Target=comp157515_c0_seq1 649 1466 +
ChrX	stalkie_big_nohaplotig	CDS	40471803	40471860	.	+	0	Parent=comp157515_c0_seq1.mrna1;Target=comp157515_c0_seq1 106 163 +
ChrX	stalkie_big_nohaplotig	CDS	40471936	40472019	.	+	2	Parent=comp157515_c0_seq1.mrna1;Target=comp157515_c0_seq1 164 247 +
ChrX	stalkie_big_nohaplotig	CDS	40472086	40472145	.	+	2	Parent=comp157515_c0_seq1.mrna1;Target=comp157515_c0_seq1 248 307 +
ChrX	stalkie_big_nohaplotig	CDS	40472204	40472326	.	+	2	Parent=comp157515_c0_seq1.mrna1;Target=comp157515_c0_seq1 308 430 +
ChrX	stalkie_big_nohaplotig	CDS	40472385	40472450	.	+	2	Parent=comp157515_c0_seq1.mrna1;Target=comp157515_c0_seq1 431 496 +
ChrX	stalkie_big_nohaplotig	CDS	40473606	40473757	.	+	2	Parent=comp157515_c0_seq1.mrna1;Target=comp157515_c0_seq1 497 648 +
ChrX	stalkie_big_nohaplotig	CDS	40473814	40473864	.	+	0	Parent=comp157515_c0_seq1.mrna1;Target=comp157515_c0_seq1 649 699 +
ChrX	gffcl	locus	40475466	40477763	.	-	.	ID=RLOC_00002384;geneIDs=FBgn0260639.1.path1;transcripts=FBgn0260639.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40475466	40477763	.	-	.	ID=FBgn0260639.1.mrna1;geneID=FBgn0260639.1.path1;Name=FBgn0260639.1;Dir=sensecoverage=100.0;identity=99.4;matches=1357;mismatches=8;indels=0;unknowns=0;locus=RLOC_00002384
ChrX	stalkie_big_nohaplotig	exon	40475466	40475849	99	-	.	Parent=FBgn0260639.1.mrna1;Target=FBgn0260639.1 982 1365 +
ChrX	stalkie_big_nohaplotig	exon	40476515	40476649	97	-	.	Parent=FBgn0260639.1.mrna1;Target=FBgn0260639.1 847 981 +
ChrX	stalkie_big_nohaplotig	exon	40476715	40477305	99	-	.	Parent=FBgn0260639.1.mrna1;Target=FBgn0260639.1 256 846 +
ChrX	stalkie_big_nohaplotig	exon	40477362	40477451	98	-	.	Parent=FBgn0260639.1.mrna1;Target=FBgn0260639.1 166 255 +
ChrX	stalkie_big_nohaplotig	exon	40477515	40477627	100	-	.	Parent=FBgn0260639.1.mrna1;Target=FBgn0260639.1 53 165 +
ChrX	stalkie_big_nohaplotig	exon	40477712	40477763	100	-	.	Parent=FBgn0260639.1.mrna1;Target=FBgn0260639.1 1 52 +
ChrX	stalkie_big_nohaplotig	CDS	40475466	40475849	.	-	0	Parent=FBgn0260639.1.mrna1;Target=FBgn0260639.1 982 1365 +
ChrX	stalkie_big_nohaplotig	CDS	40476515	40476649	.	-	0	Parent=FBgn0260639.1.mrna1;Target=FBgn0260639.1 847 981 +
ChrX	stalkie_big_nohaplotig	CDS	40476715	40477305	.	-	0	Parent=FBgn0260639.1.mrna1;Target=FBgn0260639.1 256 846 +
ChrX	stalkie_big_nohaplotig	CDS	40477362	40477451	.	-	0	Parent=FBgn0260639.1.mrna1;Target=FBgn0260639.1 166 255 +
ChrX	stalkie_big_nohaplotig	CDS	40477515	40477627	.	-	2	Parent=FBgn0260639.1.mrna1;Target=FBgn0260639.1 53 165 +
ChrX	stalkie_big_nohaplotig	CDS	40477712	40477763	.	-	0	Parent=FBgn0260639.1.mrna1;Target=FBgn0260639.1 1 52 +
ChrX	gffcl	locus	40480620	40490206	.	-	.	ID=RLOC_00002385;geneIDs=FBgn0014189.1.path1,FBgn0014189.2.path1,comp142997_c0_seq1.path1;transcripts=FBgn0014189.1.mrna1,comp142997_c0_seq1.mrna1,FBgn0014189.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40480620	40490206	.	-	.	ID=FBgn0014189.1.mrna1;geneID=FBgn0014189.1.path1;Name=FBgn0014189.1;Dir=sensecoverage=99.2;identity=99.9;matches=1335;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002385
ChrX	stalkie_big_nohaplotig	exon	40480620	40481022	100	-	.	Parent=FBgn0014189.1.mrna1;Target=FBgn0014189.1 934 1336 +
ChrX	stalkie_big_nohaplotig	exon	40481125	40481256	100	-	.	Parent=FBgn0014189.1.mrna1;Target=FBgn0014189.1 802 933 +
ChrX	stalkie_big_nohaplotig	exon	40482215	40482333	100	-	.	Parent=FBgn0014189.1.mrna1;Target=FBgn0014189.1 683 801 +
ChrX	stalkie_big_nohaplotig	exon	40482415	40482598	100	-	.	Parent=FBgn0014189.1.mrna1;Target=FBgn0014189.1 499 682 +
ChrX	stalkie_big_nohaplotig	exon	40482654	40482874	100	-	.	Parent=FBgn0014189.1.mrna1;Target=FBgn0014189.1 278 498 +
ChrX	stalkie_big_nohaplotig	exon	40483001	40483054	100	-	.	Parent=FBgn0014189.1.mrna1;Target=FBgn0014189.1 224 277 +
ChrX	stalkie_big_nohaplotig	exon	40489814	40489956	99	-	.	Parent=FBgn0014189.1.mrna1;Target=FBgn0014189.1 81 223 +
ChrX	stalkie_big_nohaplotig	exon	40490127	40490206	100	-	.	Parent=FBgn0014189.1.mrna1;Target=FBgn0014189.1 1 80 +
ChrX	stalkie_big_nohaplotig	CDS	40480621	40481022	.	-	0	Parent=FBgn0014189.1.mrna1;Target=FBgn0014189.1 934 1335 +
ChrX	stalkie_big_nohaplotig	CDS	40481125	40481256	.	-	0	Parent=FBgn0014189.1.mrna1;Target=FBgn0014189.1 802 933 +
ChrX	stalkie_big_nohaplotig	CDS	40482215	40482333	.	-	2	Parent=FBgn0014189.1.mrna1;Target=FBgn0014189.1 683 801 +
ChrX	stalkie_big_nohaplotig	CDS	40482415	40482598	.	-	0	Parent=FBgn0014189.1.mrna1;Target=FBgn0014189.1 499 682 +
ChrX	stalkie_big_nohaplotig	CDS	40482654	40482874	.	-	2	Parent=FBgn0014189.1.mrna1;Target=FBgn0014189.1 278 498 +
ChrX	stalkie_big_nohaplotig	CDS	40483001	40483054	.	-	2	Parent=FBgn0014189.1.mrna1;Target=FBgn0014189.1 224 277 +
ChrX	stalkie_big_nohaplotig	CDS	40489814	40489956	.	-	1	Parent=FBgn0014189.1.mrna1;Target=FBgn0014189.1 81 223 +
ChrX	stalkie_big_nohaplotig	CDS	40490127	40490206	.	-	0	Parent=FBgn0014189.1.mrna1;Target=FBgn0014189.1 1 80 +
ChrX	stalkie_big_nohaplotig	mRNA	40481233	40482238	.	-	.	ID=comp142997_c0_seq1.mrna1;geneID=comp142997_c0_seq1.path1;Name=comp142997_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1004;mismatches=2;indels=0;unknowns=0;Target=comp142997_c0_seq1 1006 1 .;CDS_Target=comp142997_c0_seq1 132 1 .;locus=RLOC_00002385
ChrX	stalkie_big_nohaplotig	exon	40481233	40482238	99	-	.	Parent=comp142997_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40482107	40482238	.	-	0	Parent=comp142997_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40487421	40490206	.	-	.	ID=FBgn0014189.2.mrna1;geneID=FBgn0014189.2.path1;Name=FBgn0014189.2;Dir=sensecoverage=99.2;identity=94.5;matches=1262;mismatches=74;indels=0;unknowns=0;locus=RLOC_00002385
ChrX	stalkie_big_nohaplotig	exon	40487421	40487823	89	-	.	Parent=FBgn0014189.2.mrna1;Target=FBgn0014189.2 934 1336 +
ChrX	stalkie_big_nohaplotig	exon	40487945	40488076	100	-	.	Parent=FBgn0014189.2.mrna1;Target=FBgn0014189.2 802 933 +
ChrX	stalkie_big_nohaplotig	exon	40488934	40489052	100	-	.	Parent=FBgn0014189.2.mrna1;Target=FBgn0014189.2 683 801 +
ChrX	stalkie_big_nohaplotig	exon	40489121	40489304	96	-	.	Parent=FBgn0014189.2.mrna1;Target=FBgn0014189.2 499 682 +
ChrX	stalkie_big_nohaplotig	exon	40489369	40489589	91	-	.	Parent=FBgn0014189.2.mrna1;Target=FBgn0014189.2 278 498 +
ChrX	stalkie_big_nohaplotig	exon	40489760	40489956	96	-	.	Parent=FBgn0014189.2.mrna1;Target=FBgn0014189.2 81 277 +
ChrX	stalkie_big_nohaplotig	exon	40490127	40490206	100	-	.	Parent=FBgn0014189.2.mrna1;Target=FBgn0014189.2 1 80 +
ChrX	stalkie_big_nohaplotig	CDS	40487422	40487823	.	-	0	Parent=FBgn0014189.2.mrna1;Target=FBgn0014189.2 934 1335 +
ChrX	stalkie_big_nohaplotig	CDS	40487945	40488076	.	-	0	Parent=FBgn0014189.2.mrna1;Target=FBgn0014189.2 802 933 +
ChrX	stalkie_big_nohaplotig	CDS	40488934	40489052	.	-	2	Parent=FBgn0014189.2.mrna1;Target=FBgn0014189.2 683 801 +
ChrX	stalkie_big_nohaplotig	CDS	40489121	40489304	.	-	0	Parent=FBgn0014189.2.mrna1;Target=FBgn0014189.2 499 682 +
ChrX	stalkie_big_nohaplotig	CDS	40489369	40489589	.	-	2	Parent=FBgn0014189.2.mrna1;Target=FBgn0014189.2 278 498 +
ChrX	stalkie_big_nohaplotig	CDS	40489760	40489956	.	-	1	Parent=FBgn0014189.2.mrna1;Target=FBgn0014189.2 81 277 +
ChrX	stalkie_big_nohaplotig	CDS	40490127	40490206	.	-	0	Parent=FBgn0014189.2.mrna1;Target=FBgn0014189.2 1 80 +
ChrX	gffcl	locus	40498288	40501056	.	-	.	ID=RLOC_00002386;geneIDs=FBgn0031996.1.path1;transcripts=FBgn0031996.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40498288	40501056	.	-	.	ID=FBgn0031996.1.mrna1;geneID=FBgn0031996.1.path1;Name=FBgn0031996.1;Dir=sensecoverage=100.0;identity=99.7;matches=1047;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002386
ChrX	stalkie_big_nohaplotig	exon	40498288	40498517	100	-	.	Parent=FBgn0031996.1.mrna1;Target=FBgn0031996.1 821 1050 +
ChrX	stalkie_big_nohaplotig	exon	40500064	40500225	99	-	.	Parent=FBgn0031996.1.mrna1;Target=FBgn0031996.1 659 820 +
ChrX	stalkie_big_nohaplotig	exon	40500281	40500484	99	-	.	Parent=FBgn0031996.1.mrna1;Target=FBgn0031996.1 455 658 +
ChrX	stalkie_big_nohaplotig	exon	40500542	40500725	100	-	.	Parent=FBgn0031996.1.mrna1;Target=FBgn0031996.1 271 454 +
ChrX	stalkie_big_nohaplotig	exon	40500787	40501056	99	-	.	Parent=FBgn0031996.1.mrna1;Target=FBgn0031996.1 1 270 +
ChrX	stalkie_big_nohaplotig	CDS	40498288	40498517	.	-	2	Parent=FBgn0031996.1.mrna1;Target=FBgn0031996.1 821 1050 +
ChrX	stalkie_big_nohaplotig	CDS	40500064	40500225	.	-	2	Parent=FBgn0031996.1.mrna1;Target=FBgn0031996.1 659 820 +
ChrX	stalkie_big_nohaplotig	CDS	40500281	40500484	.	-	2	Parent=FBgn0031996.1.mrna1;Target=FBgn0031996.1 455 658 +
ChrX	stalkie_big_nohaplotig	CDS	40500542	40500725	.	-	0	Parent=FBgn0031996.1.mrna1;Target=FBgn0031996.1 271 454 +
ChrX	stalkie_big_nohaplotig	CDS	40500787	40501056	.	-	0	Parent=FBgn0031996.1.mrna1;Target=FBgn0031996.1 1 270 +
ChrX	gffcl	locus	40505339	40505727	.	+	.	ID=RLOC_00002387;geneIDs=comp115099_c0_seq1.path1;transcripts=comp115099_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40505339	40505727	.	+	.	ID=comp115099_c0_seq1.mrna1;geneID=comp115099_c0_seq1.path1;Name=comp115099_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.7;matches=388;mismatches=1;indels=0;unknowns=0;Target=comp115099_c0_seq1 389 1 .;CDS_Target=comp115099_c0_seq1 183 124 .;locus=RLOC_00002387
ChrX	stalkie_big_nohaplotig	exon	40505339	40505727	99	+	.	Parent=comp115099_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40505462	40505521	.	+	0	Parent=comp115099_c0_seq1.mrna1
ChrX	gffcl	locus	40505978	40506217	.	-	.	ID=RLOC_00002388;geneIDs=comp142368_c0_seq1.path1;transcripts=comp142368_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40505978	40506217	.	-	.	ID=comp142368_c0_seq1.mrna1;geneID=comp142368_c0_seq1.path1;Name=comp142368_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=238;mismatches=2;indels=0;unknowns=0;Target=comp142368_c0_seq1 240 1 .;CDS_Target=comp142368_c0_seq1 71 3 .;locus=RLOC_00002388
ChrX	stalkie_big_nohaplotig	exon	40505978	40506217	99	-	.	Parent=comp142368_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40506147	40506215	.	-	0	Parent=comp142368_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40514745	40517772	.	-	.	ID=comp1241065_c0_seq1.mrna1;geneID=comp1241065_c0_seq1.path1;Name=comp1241065_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=597;mismatches=0;indels=0;unknowns=0;Target=comp1241065_c0_seq1 372 596 .;locus=RLOC_00002389
ChrX	stalkie_big_nohaplotig	exon	40514745	40514768	100	-	.	Parent=comp1241065_c0_seq1.mrna1;Target=comp1241065_c0_seq1 1 24 -
ChrX	stalkie_big_nohaplotig	exon	40517200	40517772	100	-	.	Parent=comp1241065_c0_seq1.mrna1;Target=comp1241065_c0_seq1 25 597 -
ChrX	stalkie_big_nohaplotig	CDS	40517547	40517771	.	-	0	Parent=comp1241065_c0_seq1.mrna1
ChrX	gffcl	locus	40526330	40530212	.	-	.	ID=RLOC_00002390;geneIDs=ORF1374.path1;transcripts=ORF1374.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40526330	40530212	.	-	.	ID=ORF1374.mrna1;geneID=ORF1374.path1;Name=ORF1374;Dir=sensecoverage=99.8;identity=98.4;matches=1102;mismatches=18;indels=0;unknowns=0;locus=RLOC_00002390
ChrX	stalkie_big_nohaplotig	exon	40526330	40526362	100	-	.	Parent=ORF1374.mrna1;Target=ORF1374 1088 1120 +
ChrX	stalkie_big_nohaplotig	exon	40526452	40526535	95	-	.	Parent=ORF1374.mrna1;Target=ORF1374 1004 1087 +
ChrX	stalkie_big_nohaplotig	exon	40526709	40526711	100	-	.	Parent=ORF1374.mrna1;Target=ORF1374 1001 1003 +
ChrX	stalkie_big_nohaplotig	exon	40526801	40526881	100	-	.	Parent=ORF1374.mrna1;Target=ORF1374 920 1000 +
ChrX	stalkie_big_nohaplotig	exon	40529243	40530084	98	-	.	Parent=ORF1374.mrna1;Target=ORF1374 78 919 +
ChrX	stalkie_big_nohaplotig	exon	40530136	40530212	93	-	.	Parent=ORF1374.mrna1;Target=ORF1374 1 77 +
ChrX	stalkie_big_nohaplotig	CDS	40526331	40526362	.	-	2	Parent=ORF1374.mrna1;Target=ORF1374 1088 1119 +
ChrX	stalkie_big_nohaplotig	CDS	40526452	40526535	.	-	2	Parent=ORF1374.mrna1;Target=ORF1374 1004 1087 +
ChrX	stalkie_big_nohaplotig	CDS	40526709	40526711	.	-	2	Parent=ORF1374.mrna1;Target=ORF1374 1001 1003 +
ChrX	stalkie_big_nohaplotig	CDS	40526801	40526881	.	-	2	Parent=ORF1374.mrna1;Target=ORF1374 920 1000 +
ChrX	stalkie_big_nohaplotig	CDS	40529243	40530084	.	-	1	Parent=ORF1374.mrna1;Target=ORF1374 78 919 +
ChrX	stalkie_big_nohaplotig	CDS	40530136	40530212	.	-	0	Parent=ORF1374.mrna1;Target=ORF1374 1 77 +
ChrX	gffcl	locus	40530704	40535312	.	+	.	ID=RLOC_00002391;geneIDs=FBgn0036710.1.path1;transcripts=FBgn0036710.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40530704	40535312	.	+	.	ID=FBgn0036710.1.mrna1;geneID=FBgn0036710.1.path1;Name=FBgn0036710.1;Dir=sensecoverage=100.0;identity=99.0;matches=1711;mismatches=17;indels=0;unknowns=0;locus=RLOC_00002391
ChrX	stalkie_big_nohaplotig	exon	40530704	40530831	96	+	.	Parent=FBgn0036710.1.mrna1;Target=FBgn0036710.1 1 128 +
ChrX	stalkie_big_nohaplotig	exon	40530886	40531190	97	+	.	Parent=FBgn0036710.1.mrna1;Target=FBgn0036710.1 129 433 +
ChrX	stalkie_big_nohaplotig	exon	40531253	40531366	100	+	.	Parent=FBgn0036710.1.mrna1;Target=FBgn0036710.1 434 547 +
ChrX	stalkie_big_nohaplotig	exon	40531430	40531652	98	+	.	Parent=FBgn0036710.1.mrna1;Target=FBgn0036710.1 548 770 +
ChrX	stalkie_big_nohaplotig	exon	40531712	40531860	100	+	.	Parent=FBgn0036710.1.mrna1;Target=FBgn0036710.1 771 919 +
ChrX	stalkie_big_nohaplotig	exon	40531928	40532049	100	+	.	Parent=FBgn0036710.1.mrna1;Target=FBgn0036710.1 920 1041 +
ChrX	stalkie_big_nohaplotig	exon	40532104	40532335	100	+	.	Parent=FBgn0036710.1.mrna1;Target=FBgn0036710.1 1042 1273 +
ChrX	stalkie_big_nohaplotig	exon	40534791	40534888	100	+	.	Parent=FBgn0036710.1.mrna1;Target=FBgn0036710.1 1274 1371 +
ChrX	stalkie_big_nohaplotig	exon	40534956	40535312	99	+	.	Parent=FBgn0036710.1.mrna1;Target=FBgn0036710.1 1372 1728 +
ChrX	stalkie_big_nohaplotig	CDS	40530704	40530831	.	+	0	Parent=FBgn0036710.1.mrna1;Target=FBgn0036710.1 1 128 +
ChrX	stalkie_big_nohaplotig	CDS	40530886	40531190	.	+	1	Parent=FBgn0036710.1.mrna1;Target=FBgn0036710.1 129 433 +
ChrX	stalkie_big_nohaplotig	CDS	40531253	40531366	.	+	2	Parent=FBgn0036710.1.mrna1;Target=FBgn0036710.1 434 547 +
ChrX	stalkie_big_nohaplotig	CDS	40531430	40531652	.	+	2	Parent=FBgn0036710.1.mrna1;Target=FBgn0036710.1 548 770 +
ChrX	stalkie_big_nohaplotig	CDS	40531712	40531860	.	+	1	Parent=FBgn0036710.1.mrna1;Target=FBgn0036710.1 771 919 +
ChrX	stalkie_big_nohaplotig	CDS	40531928	40532049	.	+	2	Parent=FBgn0036710.1.mrna1;Target=FBgn0036710.1 920 1041 +
ChrX	stalkie_big_nohaplotig	CDS	40532104	40532335	.	+	0	Parent=FBgn0036710.1.mrna1;Target=FBgn0036710.1 1042 1273 +
ChrX	stalkie_big_nohaplotig	CDS	40534791	40534888	.	+	2	Parent=FBgn0036710.1.mrna1;Target=FBgn0036710.1 1274 1371 +
ChrX	stalkie_big_nohaplotig	CDS	40534956	40535312	.	+	0	Parent=FBgn0036710.1.mrna1;Target=FBgn0036710.1 1372 1728 +
ChrX	gffcl	locus	40550038	40564375	.	+	.	ID=RLOC_00002392;geneIDs=FBgn0032598.1.path1;transcripts=FBgn0032598.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40550038	40564375	.	+	.	ID=FBgn0032598.1.mrna1;geneID=FBgn0032598.1.path1;Name=FBgn0032598.1;Dir=sensecoverage=100.0;identity=98.9;matches=1741;mismatches=11;indels=9;unknowns=0;locus=RLOC_00002392
ChrX	stalkie_big_nohaplotig	exon	40550038	40550275	95	+	.	Parent=FBgn0032598.1.mrna1;Target=FBgn0032598.1 1 247 +
ChrX	stalkie_big_nohaplotig	exon	40561639	40561881	100	+	.	Parent=FBgn0032598.1.mrna1;Target=FBgn0032598.1 248 490 +
ChrX	stalkie_big_nohaplotig	exon	40561939	40562075	98	+	.	Parent=FBgn0032598.1.mrna1;Target=FBgn0032598.1 491 627 +
ChrX	stalkie_big_nohaplotig	exon	40562643	40562977	99	+	.	Parent=FBgn0032598.1.mrna1;Target=FBgn0032598.1 628 962 +
ChrX	stalkie_big_nohaplotig	exon	40563525	40564047	99	+	.	Parent=FBgn0032598.1.mrna1;Target=FBgn0032598.1 963 1485 +
ChrX	stalkie_big_nohaplotig	exon	40564100	40564375	98	+	.	Parent=FBgn0032598.1.mrna1;Target=FBgn0032598.1 1486 1761 +
ChrX	stalkie_big_nohaplotig	CDS	40550038	40550275	.	+	0	Parent=FBgn0032598.1.mrna1;Target=FBgn0032598.1 1 247 +
ChrX	stalkie_big_nohaplotig	CDS	40561639	40561881	.	+	2	Parent=FBgn0032598.1.mrna1;Target=FBgn0032598.1 248 490 +
ChrX	stalkie_big_nohaplotig	CDS	40561939	40562075	.	+	2	Parent=FBgn0032598.1.mrna1;Target=FBgn0032598.1 491 627 +
ChrX	stalkie_big_nohaplotig	CDS	40562643	40562977	.	+	0	Parent=FBgn0032598.1.mrna1;Target=FBgn0032598.1 628 962 +
ChrX	stalkie_big_nohaplotig	CDS	40563525	40564047	.	+	1	Parent=FBgn0032598.1.mrna1;Target=FBgn0032598.1 963 1485 +
ChrX	stalkie_big_nohaplotig	CDS	40564100	40564375	.	+	0	Parent=FBgn0032598.1.mrna1;Target=FBgn0032598.1 1486 1761 +
ChrX	gffcl	locus	40564730	40565139	.	-	.	ID=RLOC_00002393;geneIDs=FBgn0261068.1.path1;transcripts=FBgn0261068.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40564730	40565139	.	-	.	ID=FBgn0261068.1.mrna1;geneID=FBgn0261068.1.path1;Name=FBgn0261068.1;Dir=sensecoverage=100.0;identity=99.4;matches=349;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002393
ChrX	stalkie_big_nohaplotig	exon	40564730	40565047	99	-	.	Parent=FBgn0261068.1.mrna1;Target=FBgn0261068.1 34 351 +
ChrX	stalkie_big_nohaplotig	exon	40565107	40565139	96	-	.	Parent=FBgn0261068.1.mrna1;Target=FBgn0261068.1 1 33 +
ChrX	stalkie_big_nohaplotig	CDS	40564730	40565047	.	-	0	Parent=FBgn0261068.1.mrna1;Target=FBgn0261068.1 34 351 +
ChrX	stalkie_big_nohaplotig	CDS	40565107	40565139	.	-	0	Parent=FBgn0261068.1.mrna1;Target=FBgn0261068.1 1 33 +
ChrX	stalkie_big_nohaplotig	mRNA	40570268	40571303	.	+	.	ID=comp150550_c0_seq1.mrna1;geneID=comp150550_c0_seq1.path1;Name=comp150550_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1023;mismatches=13;indels=0;unknowns=0;Target=comp150550_c0_seq1 1036 1 .;CDS_Target=comp150550_c0_seq1 747 652 .;locus=RLOC_00002394
ChrX	stalkie_big_nohaplotig	exon	40570268	40571303	98	+	.	Parent=comp150550_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40570919	40571014	.	+	0	Parent=comp150550_c0_seq1.mrna1
ChrX	gffcl	locus	40568864	40569470	.	+	.	ID=RLOC_00002395;geneIDs=comp113916_c0_seq1.path1;transcripts=comp113916_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40568864	40569470	.	+	.	ID=comp113916_c0_seq1.mrna1;geneID=comp113916_c0_seq1.path1;Name=comp113916_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=599;mismatches=2;indels=6;unknowns=0;Target=comp113916_c0_seq1 601 1 .;CDS_Target=comp113916_c0_seq1 496 377 .;locus=RLOC_00002395
ChrX	stalkie_big_nohaplotig	exon	40568864	40569470	98	+	.	Parent=comp113916_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40569240	40569359	.	+	0	Parent=comp113916_c0_seq1.mrna1
ChrX	gffcl	locus	40572661	40574299	.	-	.	ID=RLOC_00002396;geneIDs=comp158891_c0_seq1.path1;transcripts=comp158891_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40572661	40574299	.	-	.	ID=comp158891_c0_seq1.mrna1;geneID=comp158891_c0_seq1.path1;Name=comp158891_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=1611;mismatches=28;indels=1;unknowns=0;Target=comp158891_c0_seq1 1640 1 .;CDS_Target=comp158891_c0_seq1 1427 1227 .;locus=RLOC_00002396
ChrX	stalkie_big_nohaplotig	exon	40572661	40574299	98	-	.	Parent=comp158891_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40572874	40573074	.	-	0	Parent=comp158891_c0_seq1.mrna1
ChrX	gffcl	locus	40576094	40576663	.	+	.	ID=RLOC_00002397;geneIDs=comp147994_c0_seq1.path1;transcripts=comp147994_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40576094	40576663	.	+	.	ID=comp147994_c0_seq1.mrna1;geneID=comp147994_c0_seq1.path1;Name=comp147994_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=564;mismatches=6;indels=0;unknowns=0;Target=comp147994_c0_seq1 570 1 .;CDS_Target=comp147994_c0_seq1 518 375 .;locus=RLOC_00002397
ChrX	stalkie_big_nohaplotig	exon	40576094	40576663	98	+	.	Parent=comp147994_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40576468	40576611	.	+	0	Parent=comp147994_c0_seq1.mrna1
ChrX	gffcl	locus	40592015	40592890	.	+	.	ID=RLOC_00002398;geneIDs=comp157199_c0_seq1.path1;transcripts=comp157199_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40592015	40592890	.	+	.	ID=comp157199_c0_seq1.mrna1;geneID=comp157199_c0_seq1.path1;Name=comp157199_c0_seq1;Dir=indeterminatecoverage=99.4;identity=98.5;matches=863;mismatches=13;indels=0;unknowns=0;Target=comp157199_c0_seq1 880 5 .;CDS_Target=comp157199_c0_seq1 107 6 .;locus=RLOC_00002398
ChrX	stalkie_big_nohaplotig	exon	40592015	40592890	98	+	.	Parent=comp157199_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40592016	40592117	.	+	0	Parent=comp157199_c0_seq1.mrna1
ChrX	gffcl	locus	40594160	40596378	.	+	.	ID=RLOC_00002399;geneIDs=comp161544_c0_seq1.path1;transcripts=comp161544_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40594160	40596378	.	+	.	ID=comp161544_c0_seq1.mrna1;geneID=comp161544_c0_seq1.path1;Name=comp161544_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=2194;mismatches=21;indels=4;unknowns=0;Target=comp161544_c0_seq1 2215 1 .;CDS_Target=comp161544_c0_seq1 1738 1706 .;locus=RLOC_00002399
ChrX	stalkie_big_nohaplotig	exon	40594160	40596378	98	+	.	Parent=comp161544_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40595865	40595899	.	+	0	Parent=comp161544_c0_seq1.mrna1
ChrX	gffcl	locus	40598092	40599110	.	+	.	ID=RLOC_00002400;geneIDs=comp154781_c1_seq1.path1;transcripts=comp154781_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40598092	40599110	.	+	.	ID=comp154781_c1_seq1.mrna1;geneID=comp154781_c1_seq1.path1;Name=comp154781_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1015;mismatches=4;indels=0;unknowns=0;Target=comp154781_c1_seq1 1019 1 .;CDS_Target=comp154781_c1_seq1 553 383 .;locus=RLOC_00002400
ChrX	stalkie_big_nohaplotig	exon	40598092	40599110	99	+	.	Parent=comp154781_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40598474	40598644	.	+	0	Parent=comp154781_c1_seq1.mrna1
ChrX	gffcl	locus	40600641	40602444	.	.	.	ID=RLOC_00002401;geneIDs=comp122156_c1_seq1.path1,comp159186_c0_seq1.path1;transcripts=comp159186_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40601025	40602444	.	+	.	ID=comp159186_c0_seq1.mrna1;geneID=comp159186_c0_seq1.path1;Name=comp159186_c0_seq1;Dir=indeterminatecoverage=99.1;identity=97.9;matches=1412;mismatches=8;indels=23;unknowns=0;Target=comp159186_c0_seq1 1455 13 .;CDS_Target=comp159186_c0_seq1 616 587 .;locus=RLOC_00002401
ChrX	stalkie_big_nohaplotig	exon	40601025	40602444	97	+	.	Parent=comp159186_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40601598	40601619	.	+	0	Parent=comp159186_c0_seq1.mrna1
ChrX	gffcl	locus	40602612	40603635	.	-	.	ID=RLOC_00002402;geneIDs=comp148695_c0_seq1.path1;transcripts=comp148695_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40602612	40603635	.	-	.	ID=comp148695_c0_seq1.mrna1;geneID=comp148695_c0_seq1.path1;Name=comp148695_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=1021;mismatches=3;indels=0;unknowns=0;Target=comp148695_c0_seq1 1027 4 .;CDS_Target=comp148695_c0_seq1 988 851 .;locus=RLOC_00002402
ChrX	stalkie_big_nohaplotig	exon	40602612	40603635	99	-	.	Parent=comp148695_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40602651	40602788	.	-	0	Parent=comp148695_c0_seq1.mrna1
ChrX	gffcl	locus	40604553	40604771	.	+	.	ID=RLOC_00002403;geneIDs=comp139966_c0_seq1.path1;transcripts=comp139966_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40604553	40604771	.	+	.	ID=comp139966_c0_seq1.mrna1;geneID=comp139966_c0_seq1.path1;Name=comp139966_c0_seq1;Dir=indeterminatecoverage=93.5;identity=98.2;matches=215;mismatches=1;indels=3;unknowns=0;Target=comp139966_c0_seq1 216 1 .;CDS_Target=comp139966_c0_seq1 75 1 .;locus=RLOC_00002403
ChrX	stalkie_big_nohaplotig	exon	40604553	40604771	98	+	.	Parent=comp139966_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40604553	40604630	.	+	0	Parent=comp139966_c0_seq1.mrna1
ChrX	gffcl	locus	40605183	40605529	.	+	.	ID=RLOC_00002404;geneIDs=comp117074_c0_seq1.path1;transcripts=comp117074_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40605183	40605529	.	+	.	ID=comp117074_c0_seq1.mrna1;geneID=comp117074_c0_seq1.path1;Name=comp117074_c0_seq1;Dir=indeterminatecoverage=91.7;identity=98.8;matches=343;mismatches=1;indels=3;unknowns=0;Target=comp117074_c0_seq1 364 21 .;CDS_Target=comp117074_c0_seq1 119 21 .;locus=RLOC_00002404
ChrX	stalkie_big_nohaplotig	exon	40605183	40605529	98	+	.	Parent=comp117074_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40605183	40605281	.	+	0	Parent=comp117074_c0_seq1.mrna1
ChrX	gffcl	locus	40624604	40629640	.	+	.	ID=RLOC_00002405;geneIDs=FBgn0032601.1.path1;transcripts=FBgn0032601.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40624604	40629640	.	+	.	ID=FBgn0032601.1.mrna1;geneID=FBgn0032601.1.path1;Name=FBgn0032601.1;Dir=sensecoverage=100.0;identity=99.7;matches=1447;mismatches=5;indels=0;unknowns=0;locus=RLOC_00002405
ChrX	stalkie_big_nohaplotig	exon	40624604	40624937	99	+	.	Parent=FBgn0032601.1.mrna1;Target=FBgn0032601.1 1 334 +
ChrX	stalkie_big_nohaplotig	exon	40628523	40629640	99	+	.	Parent=FBgn0032601.1.mrna1;Target=FBgn0032601.1 335 1452 +
ChrX	stalkie_big_nohaplotig	CDS	40624604	40624937	.	+	0	Parent=FBgn0032601.1.mrna1;Target=FBgn0032601.1 1 334 +
ChrX	stalkie_big_nohaplotig	CDS	40628523	40629640	.	+	2	Parent=FBgn0032601.1.mrna1;Target=FBgn0032601.1 335 1452 +
ChrX	gffcl	locus	40630995	40631475	.	+	.	ID=RLOC_00002406;geneIDs=comp176507_c0_seq1.path1;transcripts=comp176507_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40630995	40631475	.	+	.	ID=comp176507_c0_seq1.mrna1;geneID=comp176507_c0_seq1.path1;Name=comp176507_c0_seq1;Dir=sensecoverage=98.7;identity=99.5;matches=377;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002406
ChrX	stalkie_big_nohaplotig	exon	40630995	40631143	100	+	.	Parent=comp176507_c0_seq1.mrna1;Target=comp176507_c0_seq1 1 149 +
ChrX	stalkie_big_nohaplotig	exon	40631246	40631475	99	+	.	Parent=comp176507_c0_seq1.mrna1;Target=comp176507_c0_seq1 150 379 +
ChrX	stalkie_big_nohaplotig	CDS	40631104	40631143	.	+	0	Parent=comp176507_c0_seq1.mrna1;Target=comp176507_c0_seq1 110 149 +
ChrX	stalkie_big_nohaplotig	CDS	40631246	40631325	.	+	2	Parent=comp176507_c0_seq1.mrna1;Target=comp176507_c0_seq1 150 229 +
ChrX	gffcl	locus	40673562	40674275	.	-	.	ID=RLOC_00002407;geneIDs=comp146150_c0_seq1.path1;transcripts=comp146150_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40673562	40674275	.	-	.	ID=comp146150_c0_seq1.mrna1;geneID=comp146150_c0_seq1.path1;Name=comp146150_c0_seq1;Dir=indeterminatecoverage=99.9;identity=93.7;matches=673;mismatches=38;indels=7;unknowns=0;Target=comp146150_c0_seq1 715 1 .;CDS_Target=comp146150_c0_seq1 105 1 .;locus=RLOC_00002407
ChrX	stalkie_big_nohaplotig	exon	40673562	40674275	93	-	.	Parent=comp146150_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40674168	40674275	.	-	0	Parent=comp146150_c0_seq1.mrna1
ChrX	gffcl	locus	40690215	40692529	.	+	.	ID=RLOC_00002408;geneIDs=comp64293_c0_seq1.path1,comp1542128_c0_seq1.path1;transcripts=comp64293_c0_seq1.mrna1,comp1542128_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40690215	40692529	.	+	.	ID=comp64293_c0_seq1.mrna1;geneID=comp64293_c0_seq1.path1;Name=comp64293_c0_seq1;Dir=antisensecoverage=99.6;identity=97.4;matches=742;mismatches=6;indels=14;unknowns=0;Target=comp64293_c0_seq1 524 754 .;locus=RLOC_00002408
ChrX	stalkie_big_nohaplotig	exon	40690215	40690737	96	+	.	Parent=comp64293_c0_seq1.mrna1;Target=comp64293_c0_seq1 234 754 -
ChrX	stalkie_big_nohaplotig	exon	40690844	40691052	99	+	.	Parent=comp64293_c0_seq1.mrna1;Target=comp64293_c0_seq1 25 233 -
ChrX	stalkie_big_nohaplotig	exon	40692506	40692529	100	+	.	Parent=comp64293_c0_seq1.mrna1;Target=comp64293_c0_seq1 1 24 -
ChrX	stalkie_big_nohaplotig	CDS	40690215	40690445	.	+	0	Parent=comp64293_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40691382	40692525	.	+	.	ID=comp1542128_c0_seq1.mrna1;geneID=comp1542128_c0_seq1.path1;Name=comp1542128_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=327;mismatches=0;indels=0;unknowns=0;Target=comp1542128_c0_seq1 161 244 .;locus=RLOC_00002408
ChrX	stalkie_big_nohaplotig	exon	40691382	40691688	100	+	.	Parent=comp1542128_c0_seq1.mrna1;Target=comp1542128_c0_seq1 21 327 -
ChrX	stalkie_big_nohaplotig	exon	40692506	40692525	100	+	.	Parent=comp1542128_c0_seq1.mrna1;Target=comp1542128_c0_seq1 1 20 -
ChrX	stalkie_big_nohaplotig	CDS	40691465	40691548	.	+	0	Parent=comp1542128_c0_seq1.mrna1
ChrX	gffcl	locus	40696656	40697090	.	-	.	ID=RLOC_00002409;geneIDs=comp138440_c1_seq1.path1;transcripts=comp138440_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40696656	40697090	.	-	.	ID=comp138440_c1_seq1.mrna1;geneID=comp138440_c1_seq1.path1;Name=comp138440_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=433;mismatches=2;indels=0;unknowns=0;Target=comp138440_c1_seq1 435 1 .;CDS_Target=comp138440_c1_seq1 410 273 .;locus=RLOC_00002409
ChrX	stalkie_big_nohaplotig	exon	40696656	40697090	99	-	.	Parent=comp138440_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40696681	40696818	.	-	0	Parent=comp138440_c1_seq1.mrna1
ChrX	gffcl	locus	40702897	40703240	.	+	.	ID=RLOC_00002410;geneIDs=comp137333_c0_seq1.path1;transcripts=comp137333_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40702897	40703240	.	+	.	ID=comp137333_c0_seq1.mrna1;geneID=comp137333_c0_seq1.path1;Name=comp137333_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=342;mismatches=2;indels=1;unknowns=0;Target=comp137333_c0_seq1 345 1 .;CDS_Target=comp137333_c0_seq1 251 126 .;locus=RLOC_00002410
ChrX	stalkie_big_nohaplotig	exon	40702897	40703240	99	+	.	Parent=comp137333_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40703022	40703146	.	+	0	Parent=comp137333_c0_seq1.mrna1
ChrX	gffcl	locus	40721318	40721563	.	+	.	ID=RLOC_00002411;geneIDs=comp154897_c0_seq1.path1;transcripts=comp154897_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40721318	40721563	.	+	.	ID=comp154897_c0_seq1.mrna1;geneID=comp154897_c0_seq1.path1;Name=comp154897_c0_seq1;Dir=indeterminatecoverage=30.4;identity=92.9;matches=234;mismatches=8;indels=10;unknowns=0;Target=comp154897_c0_seq1 248 1 .;CDS_Target=comp154897_c0_seq1 248 128 .;locus=RLOC_00002411
ChrX	stalkie_big_nohaplotig	exon	40721318	40721563	92	+	.	Parent=comp154897_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40721444	40721563	.	+	0	Parent=comp154897_c0_seq1.mrna1
ChrX	gffcl	locus	40723687	40729247	.	-	.	ID=RLOC_00002412;geneIDs=FBgn0000406.1.path1;transcripts=FBgn0000406.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40723687	40729247	.	-	.	ID=FBgn0000406.1.mrna1;geneID=FBgn0000406.1.path1;Name=FBgn0000406.1;Dir=sensecoverage=100.0;identity=99.2;matches=1303;mismatches=11;indels=0;unknowns=0;locus=RLOC_00002412
ChrX	stalkie_big_nohaplotig	exon	40723687	40724191	99	-	.	Parent=FBgn0000406.1.mrna1;Target=FBgn0000406.1 810 1314 +
ChrX	stalkie_big_nohaplotig	exon	40724253	40724635	98	-	.	Parent=FBgn0000406.1.mrna1;Target=FBgn0000406.1 427 809 +
ChrX	stalkie_big_nohaplotig	exon	40724693	40724896	98	-	.	Parent=FBgn0000406.1.mrna1;Target=FBgn0000406.1 223 426 +
ChrX	stalkie_big_nohaplotig	exon	40726511	40726637	100	-	.	Parent=FBgn0000406.1.mrna1;Target=FBgn0000406.1 96 222 +
ChrX	stalkie_big_nohaplotig	exon	40729153	40729247	100	-	.	Parent=FBgn0000406.1.mrna1;Target=FBgn0000406.1 1 95 +
ChrX	stalkie_big_nohaplotig	CDS	40723687	40724191	.	-	1	Parent=FBgn0000406.1.mrna1;Target=FBgn0000406.1 810 1314 +
ChrX	stalkie_big_nohaplotig	CDS	40724253	40724635	.	-	0	Parent=FBgn0000406.1.mrna1;Target=FBgn0000406.1 427 809 +
ChrX	stalkie_big_nohaplotig	CDS	40724693	40724896	.	-	0	Parent=FBgn0000406.1.mrna1;Target=FBgn0000406.1 223 426 +
ChrX	stalkie_big_nohaplotig	CDS	40726511	40726637	.	-	1	Parent=FBgn0000406.1.mrna1;Target=FBgn0000406.1 96 222 +
ChrX	stalkie_big_nohaplotig	CDS	40729153	40729247	.	-	0	Parent=FBgn0000406.1.mrna1;Target=FBgn0000406.1 1 95 +
ChrX	gffcl	locus	40725289	40725971	.	+	.	ID=RLOC_00002413;geneIDs=comp48022_c0_seq1.path1;transcripts=comp48022_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40725289	40725971	.	+	.	ID=comp48022_c0_seq1.mrna1;geneID=comp48022_c0_seq1.path1;Name=comp48022_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.8;matches=505;mismatches=16;indels=6;unknowns=0;locus=RLOC_00002413
ChrX	stalkie_big_nohaplotig	exon	40725289	40725431	92	+	.	Parent=comp48022_c0_seq1.mrna1;Target=comp48022_c0_seq1 143 1 .
ChrX	stalkie_big_nohaplotig	exon	40725594	40725971	97	+	.	Parent=comp48022_c0_seq1.mrna1;Target=comp48022_c0_seq1 527 144 .
ChrX	stalkie_big_nohaplotig	CDS	40725411	40725431	.	+	0	Parent=comp48022_c0_seq1.mrna1;Target=comp48022_c0_seq1 143 123 .
ChrX	stalkie_big_nohaplotig	CDS	40725594	40725669	.	+	0	Parent=comp48022_c0_seq1.mrna1;Target=comp48022_c0_seq1 224 144 .
ChrX	gffcl	locus	40727446	40728754	.	-	.	ID=RLOC_00002414;geneIDs=comp151791_c0_seq1.path1;transcripts=comp151791_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40727446	40728754	.	-	.	ID=comp151791_c0_seq1.mrna1;geneID=comp151791_c0_seq1.path1;Name=comp151791_c0_seq1;Dir=indeterminatecoverage=99.5;identity=96.7;matches=1277;mismatches=28;indels=15;unknowns=0;Target=comp151791_c0_seq1 1316 1 .;CDS_Target=comp151791_c0_seq1 974 825 .;locus=RLOC_00002414
ChrX	stalkie_big_nohaplotig	exon	40727446	40728754	96	-	.	Parent=comp151791_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40727788	40727928	.	-	0	Parent=comp151791_c0_seq1.mrna1
ChrX	gffcl	locus	40739297	40739647	.	-	.	ID=RLOC_00002415;geneIDs=FBgn0043001.1.path1;transcripts=FBgn0043001.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40739297	40739647	.	-	.	ID=FBgn0043001.1.mrna1;geneID=FBgn0043001.1.path1;Name=FBgn0043001.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=351;mismatches=0;indels=0;unknowns=0;Target=FBgn0043001.1 351 1 .;locus=RLOC_00002415
ChrX	stalkie_big_nohaplotig	exon	40739297	40739647	100	-	.	Parent=FBgn0043001.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40739297	40739647	.	-	0	Parent=FBgn0043001.1.mrna1
ChrX	gffcl	locus	40745217	40747383	.	+	.	ID=RLOC_00002416;geneIDs=FBgn0003607.2.path1;transcripts=FBgn0003607.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40745217	40747383	.	+	.	ID=FBgn0003607.2.mrna1;geneID=FBgn0003607.2.path1;Name=FBgn0003607.2;Dir=sensecoverage=100.0;identity=100.0;matches=600;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002416
ChrX	stalkie_big_nohaplotig	exon	40745217	40745333	100	+	.	Parent=FBgn0003607.2.mrna1;Target=FBgn0003607.2 1 117 +
ChrX	stalkie_big_nohaplotig	exon	40746775	40746879	100	+	.	Parent=FBgn0003607.2.mrna1;Target=FBgn0003607.2 118 222 +
ChrX	stalkie_big_nohaplotig	exon	40746946	40747045	100	+	.	Parent=FBgn0003607.2.mrna1;Target=FBgn0003607.2 223 322 +
ChrX	stalkie_big_nohaplotig	exon	40747106	40747383	100	+	.	Parent=FBgn0003607.2.mrna1;Target=FBgn0003607.2 323 600 +
ChrX	stalkie_big_nohaplotig	CDS	40745217	40745333	.	+	0	Parent=FBgn0003607.2.mrna1;Target=FBgn0003607.2 1 117 +
ChrX	stalkie_big_nohaplotig	CDS	40746775	40746879	.	+	0	Parent=FBgn0003607.2.mrna1;Target=FBgn0003607.2 118 222 +
ChrX	stalkie_big_nohaplotig	CDS	40746946	40747045	.	+	0	Parent=FBgn0003607.2.mrna1;Target=FBgn0003607.2 223 322 +
ChrX	stalkie_big_nohaplotig	CDS	40747106	40747383	.	+	2	Parent=FBgn0003607.2.mrna1;Target=FBgn0003607.2 323 600 +
ChrX	gffcl	locus	40768477	40771759	.	+	.	ID=RLOC_00002417;geneIDs=comp146898_c0_seq1.path1;transcripts=comp146898_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40768477	40771759	.	+	.	ID=comp146898_c0_seq1.mrna1;geneID=comp146898_c0_seq1.path1;Name=comp146898_c0_seq1;Dir=sensecoverage=88.9;identity=96.5;matches=633;mismatches=23;indels=0;unknowns=0;Target=comp146898_c0_seq1 548 634 +;locus=RLOC_00002417
ChrX	stalkie_big_nohaplotig	exon	40768477	40768606	97	+	.	Parent=comp146898_c0_seq1.mrna1;Target=comp146898_c0_seq1 15 144 +
ChrX	stalkie_big_nohaplotig	exon	40771150	40771378	97	+	.	Parent=comp146898_c0_seq1.mrna1;Target=comp146898_c0_seq1 145 373 +
ChrX	stalkie_big_nohaplotig	exon	40771463	40771759	95	+	.	Parent=comp146898_c0_seq1.mrna1;Target=comp146898_c0_seq1 374 670 +
ChrX	stalkie_big_nohaplotig	CDS	40771637	40771723	.	+	0	Parent=comp146898_c0_seq1.mrna1
ChrX	gffcl	locus	40790863	40802982	.	+	.	ID=RLOC_00002418;geneIDs=comp145114_c0_seq1.path1;transcripts=comp145114_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40790863	40802982	.	+	.	ID=comp145114_c0_seq1.mrna1;geneID=comp145114_c0_seq1.path1;Name=comp145114_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=311;mismatches=1;indels=0;unknowns=0;Target=comp145114_c0_seq1 133 219 +;locus=RLOC_00002418
ChrX	stalkie_big_nohaplotig	exon	40790863	40790986	100	+	.	Parent=comp145114_c0_seq1.mrna1;Target=comp145114_c0_seq1 1 124 +
ChrX	stalkie_big_nohaplotig	exon	40802795	40802982	99	+	.	Parent=comp145114_c0_seq1.mrna1;Target=comp145114_c0_seq1 125 312 +
ChrX	stalkie_big_nohaplotig	CDS	40802803	40802889	.	+	0	Parent=comp145114_c0_seq1.mrna1
ChrX	gffcl	locus	40820022	40837569	.	-	.	ID=RLOC_00002419;geneIDs=FBgn0032614.1.path1;transcripts=FBgn0032614.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40820022	40837569	.	-	.	ID=FBgn0032614.1.mrna1;geneID=FBgn0032614.1.path1;Name=FBgn0032614.1;Dir=sensecoverage=100.0;identity=99.2;matches=1030;mismatches=8;indels=0;unknowns=0;locus=RLOC_00002419
ChrX	stalkie_big_nohaplotig	exon	40820022	40820126	99	-	.	Parent=FBgn0032614.1.mrna1;Target=FBgn0032614.1 934 1038 +
ChrX	stalkie_big_nohaplotig	exon	40820441	40820889	99	-	.	Parent=FBgn0032614.1.mrna1;Target=FBgn0032614.1 485 933 +
ChrX	stalkie_big_nohaplotig	exon	40825746	40825856	99	-	.	Parent=FBgn0032614.1.mrna1;Target=FBgn0032614.1 374 484 +
ChrX	stalkie_big_nohaplotig	exon	40827856	40827978	100	-	.	Parent=FBgn0032614.1.mrna1;Target=FBgn0032614.1 251 373 +
ChrX	stalkie_big_nohaplotig	exon	40837320	40837569	99	-	.	Parent=FBgn0032614.1.mrna1;Target=FBgn0032614.1 1 250 +
ChrX	stalkie_big_nohaplotig	CDS	40820022	40820126	.	-	0	Parent=FBgn0032614.1.mrna1;Target=FBgn0032614.1 934 1038 +
ChrX	stalkie_big_nohaplotig	CDS	40820441	40820889	.	-	2	Parent=FBgn0032614.1.mrna1;Target=FBgn0032614.1 485 933 +
ChrX	stalkie_big_nohaplotig	CDS	40825746	40825856	.	-	2	Parent=FBgn0032614.1.mrna1;Target=FBgn0032614.1 374 484 +
ChrX	stalkie_big_nohaplotig	CDS	40827856	40827978	.	-	2	Parent=FBgn0032614.1.mrna1;Target=FBgn0032614.1 251 373 +
ChrX	stalkie_big_nohaplotig	CDS	40837320	40837569	.	-	0	Parent=FBgn0032614.1.mrna1;Target=FBgn0032614.1 1 250 +
ChrX	gffcl	locus	40837645	40838107	.	+	.	ID=RLOC_00002420;geneIDs=comp151595_c0_seq1.path1;transcripts=comp151595_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40837645	40838107	.	+	.	ID=comp151595_c0_seq1.mrna1;geneID=comp151595_c0_seq1.path1;Name=comp151595_c0_seq1;Dir=indeterminatecoverage=98.7;identity=97.5;matches=459;mismatches=2;indels=10;unknowns=0;Target=comp151595_c0_seq1 475 7 .;CDS_Target=comp151595_c0_seq1 59 9 .;locus=RLOC_00002420
ChrX	stalkie_big_nohaplotig	exon	40837645	40838107	97	+	.	Parent=comp151595_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	40837647	40837699	.	+	0	Parent=comp151595_c0_seq1.mrna1
ChrX	gffcl	locus	40848603	40851175	.	-	.	ID=RLOC_00002421;geneIDs=FBgn0032615.2.path1;transcripts=FBgn0032615.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40848603	40851175	.	-	.	ID=FBgn0032615.2.mrna1;geneID=FBgn0032615.2.path1;Name=FBgn0032615.2;Dir=sensecoverage=100.0;identity=99.2;matches=1116;mismatches=9;indels=0;unknowns=0;locus=RLOC_00002421
ChrX	stalkie_big_nohaplotig	exon	40848603	40848692	100	-	.	Parent=FBgn0032615.2.mrna1;Target=FBgn0032615.2 1036 1125 +
ChrX	stalkie_big_nohaplotig	exon	40849918	40850369	98	-	.	Parent=FBgn0032615.2.mrna1;Target=FBgn0032615.2 584 1035 +
ChrX	stalkie_big_nohaplotig	exon	40850434	40850544	98	-	.	Parent=FBgn0032615.2.mrna1;Target=FBgn0032615.2 473 583 +
ChrX	stalkie_big_nohaplotig	exon	40850635	40850757	99	-	.	Parent=FBgn0032615.2.mrna1;Target=FBgn0032615.2 350 472 +
ChrX	stalkie_big_nohaplotig	exon	40850827	40851175	99	-	.	Parent=FBgn0032615.2.mrna1;Target=FBgn0032615.2 1 349 +
ChrX	stalkie_big_nohaplotig	CDS	40848603	40848692	.	-	0	Parent=FBgn0032615.2.mrna1;Target=FBgn0032615.2 1036 1125 +
ChrX	stalkie_big_nohaplotig	CDS	40849918	40850369	.	-	2	Parent=FBgn0032615.2.mrna1;Target=FBgn0032615.2 584 1035 +
ChrX	stalkie_big_nohaplotig	CDS	40850434	40850544	.	-	2	Parent=FBgn0032615.2.mrna1;Target=FBgn0032615.2 473 583 +
ChrX	stalkie_big_nohaplotig	CDS	40850635	40850757	.	-	2	Parent=FBgn0032615.2.mrna1;Target=FBgn0032615.2 350 472 +
ChrX	stalkie_big_nohaplotig	CDS	40850827	40851175	.	-	0	Parent=FBgn0032615.2.mrna1;Target=FBgn0032615.2 1 349 +
ChrX	gffcl	locus	40858501	40859970	.	-	.	ID=RLOC_00002422;geneIDs=FBgn0032615.3.path1;transcripts=FBgn0032615.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40858501	40859970	.	-	.	ID=FBgn0032615.3.mrna1;geneID=FBgn0032615.3.path1;Name=FBgn0032615.3;Dir=sensecoverage=99.3;identity=99.8;matches=957;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002422
ChrX	stalkie_big_nohaplotig	exon	40858501	40858590	100	-	.	Parent=FBgn0032615.3.mrna1;Target=FBgn0032615.3 877 966 +
ChrX	stalkie_big_nohaplotig	exon	40858863	40859314	100	-	.	Parent=FBgn0032615.3.mrna1;Target=FBgn0032615.3 425 876 +
ChrX	stalkie_big_nohaplotig	exon	40859367	40859477	100	-	.	Parent=FBgn0032615.3.mrna1;Target=FBgn0032615.3 314 424 +
ChrX	stalkie_big_nohaplotig	exon	40859594	40859716	100	-	.	Parent=FBgn0032615.3.mrna1;Target=FBgn0032615.3 191 313 +
ChrX	stalkie_big_nohaplotig	exon	40859788	40859970	98	-	.	Parent=FBgn0032615.3.mrna1;Target=FBgn0032615.3 8 190 +
ChrX	stalkie_big_nohaplotig	CDS	40858501	40858590	.	-	0	Parent=FBgn0032615.3.mrna1;Target=FBgn0032615.3 877 966 +
ChrX	stalkie_big_nohaplotig	CDS	40858863	40859314	.	-	2	Parent=FBgn0032615.3.mrna1;Target=FBgn0032615.3 425 876 +
ChrX	stalkie_big_nohaplotig	CDS	40859367	40859477	.	-	2	Parent=FBgn0032615.3.mrna1;Target=FBgn0032615.3 314 424 +
ChrX	stalkie_big_nohaplotig	CDS	40859594	40859716	.	-	2	Parent=FBgn0032615.3.mrna1;Target=FBgn0032615.3 191 313 +
ChrX	stalkie_big_nohaplotig	CDS	40859788	40859968	.	-	0	Parent=FBgn0032615.3.mrna1;Target=FBgn0032615.3 10 190 +
ChrX	gffcl	locus	40927783	40963976	.	+	.	ID=RLOC_00002423;geneIDs=comp154301_c0_seq1.path1;transcripts=comp154301_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40927783	40963976	.	+	.	ID=comp154301_c0_seq1.mrna1;geneID=comp154301_c0_seq1.path1;Name=comp154301_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.7;matches=2043;mismatches=14;indels=12;unknowns=0;Target=comp154301_c0_seq1 1010 783 .;locus=RLOC_00002423
ChrX	stalkie_big_nohaplotig	exon	40927783	40928340	97	+	.	Parent=comp154301_c0_seq1.mrna1;Target=comp154301_c0_seq1 557 8 .
ChrX	stalkie_big_nohaplotig	exon	40942553	40942557	100	+	.	Parent=comp154301_c0_seq1.mrna1;Target=comp154301_c0_seq1 562 558 .
ChrX	stalkie_big_nohaplotig	exon	40950117	40950124	100	+	.	Parent=comp154301_c0_seq1.mrna1;Target=comp154301_c0_seq1 575 568 .
ChrX	stalkie_big_nohaplotig	exon	40956384	40956385	100	+	.	Parent=comp154301_c0_seq1.mrna1;Target=comp154301_c0_seq1 577 576 .
ChrX	stalkie_big_nohaplotig	exon	40962484	40963976	99	+	.	Parent=comp154301_c0_seq1.mrna1;Target=comp154301_c0_seq1 2072 578 .
ChrX	stalkie_big_nohaplotig	CDS	40962689	40962916	.	+	0	Parent=comp154301_c0_seq1.mrna1
ChrX	gffcl	locus	40969139	40969462	.	+	.	ID=RLOC_00002424;geneIDs=FBgn0040985.1.path1;transcripts=FBgn0040985.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	40969139	40969462	.	+	.	ID=FBgn0040985.1.mrna1;geneID=FBgn0040985.1.path1;Name=FBgn0040985.1;Dir=sensecoverage=100.0;identity=99.6;matches=257;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002424
ChrX	stalkie_big_nohaplotig	exon	40969139	40969192	100	+	.	Parent=FBgn0040985.1.mrna1;Target=FBgn0040985.1 1 54 +
ChrX	stalkie_big_nohaplotig	exon	40969259	40969462	99	+	.	Parent=FBgn0040985.1.mrna1;Target=FBgn0040985.1 55 258 +
ChrX	stalkie_big_nohaplotig	CDS	40969139	40969192	.	+	0	Parent=FBgn0040985.1.mrna1;Target=FBgn0040985.1 1 54 +
ChrX	stalkie_big_nohaplotig	CDS	40969259	40969462	.	+	0	Parent=FBgn0040985.1.mrna1;Target=FBgn0040985.1 55 258 +
ChrX	gffcl	locus	41015540	41037118	.	-	.	ID=RLOC_00002426;geneIDs=FBgn0004507.1.path1;transcripts=FBgn0004507.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41015540	41037118	.	-	.	ID=FBgn0004507.1.mrna1;geneID=FBgn0004507.1.path1;Name=FBgn0004507.1;Dir=sensecoverage=100.0;identity=99.6;matches=2541;mismatches=6;indels=5;unknowns=0;locus=RLOC_00002426
ChrX	stalkie_big_nohaplotig	exon	41015540	41015695	99	-	.	Parent=FBgn0004507.1.mrna1;Target=FBgn0004507.1 2392 2547 +
ChrX	stalkie_big_nohaplotig	exon	41015765	41017383	99	-	.	Parent=FBgn0004507.1.mrna1;Target=FBgn0004507.1 778 2391 +
ChrX	stalkie_big_nohaplotig	exon	41017450	41017971	99	-	.	Parent=FBgn0004507.1.mrna1;Target=FBgn0004507.1 256 777 +
ChrX	stalkie_big_nohaplotig	exon	41036864	41037118	100	-	.	Parent=FBgn0004507.1.mrna1;Target=FBgn0004507.1 1 255 +
ChrX	stalkie_big_nohaplotig	CDS	41015540	41015695	.	-	0	Parent=FBgn0004507.1.mrna1;Target=FBgn0004507.1 2392 2547 +
ChrX	stalkie_big_nohaplotig	CDS	41015765	41017246	.	-	0	Parent=FBgn0004507.1.mrna1;Target=FBgn0004507.1 910 2391 +
ChrX	gffcl	locus	41028390	43003128	.	-	.	ID=RLOC_00002427;geneIDs=comp162042_c3_seq1.path1;transcripts=comp162042_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41028390	43003128	.	-	.	ID=comp162042_c3_seq1.mrna1;geneID=comp162042_c3_seq1.path1;Name=comp162042_c3_seq1;Dir=indeterminatecoverage=47.5;identity=97.2;matches=2766;mismatches=31;indels=50;unknowns=0;Target=comp162042_c3_seq1 899 837 .;locus=RLOC_00002427
ChrX	stalkie_big_nohaplotig	exon	41028390	41028403	85	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3742 3729 .
ChrX	stalkie_big_nohaplotig	exon	41031649	41031680	68	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3728 3701 .
ChrX	stalkie_big_nohaplotig	exon	41038342	41038359	83	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3700 3683 .
ChrX	stalkie_big_nohaplotig	exon	41038975	41038982	62	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3682 3675 .
ChrX	stalkie_big_nohaplotig	exon	41039224	41039236	92	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3674 3662 .
ChrX	stalkie_big_nohaplotig	exon	41039336	41039342	100	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3661 3655 .
ChrX	stalkie_big_nohaplotig	exon	41042670	41042678	100	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3654 3646 .
ChrX	stalkie_big_nohaplotig	exon	41043562	41043566	100	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3645 3641 .
ChrX	stalkie_big_nohaplotig	exon	41051492	41051499	26	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3640 3615 .
ChrX	stalkie_big_nohaplotig	exon	41057332	41057338	100	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3614 3608 .
ChrX	stalkie_big_nohaplotig	exon	41058287	41058315	42	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3607 3566 .
ChrX	stalkie_big_nohaplotig	exon	41065037	41065046	100	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3542 3533 .
ChrX	stalkie_big_nohaplotig	exon	41066045	41066051	100	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3501 3495 .
ChrX	stalkie_big_nohaplotig	exon	41070394	41070398	100	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3494 3490 .
ChrX	stalkie_big_nohaplotig	exon	41075918	41075927	100	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3476 3467 .
ChrX	stalkie_big_nohaplotig	exon	41076797	41076799	100	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3466 3464 .
ChrX	stalkie_big_nohaplotig	exon	41079742	41079745	100	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3463 3460 .
ChrX	stalkie_big_nohaplotig	exon	41081113	41081115	100	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3459 3457 .
ChrX	stalkie_big_nohaplotig	exon	41083544	41083553	100	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3456 3447 .
ChrX	stalkie_big_nohaplotig	exon	41098162	41098169	100	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3446 3439 .
ChrX	stalkie_big_nohaplotig	exon	41104357	41104360	100	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3438 3435 .
ChrX	stalkie_big_nohaplotig	exon	41104492	41104497	100	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3434 3429 .
ChrX	stalkie_big_nohaplotig	exon	41107271	41107274	100	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3428 3425 .
ChrX	stalkie_big_nohaplotig	exon	41115314	41115315	100	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3424 3423 .
ChrX	stalkie_big_nohaplotig	exon	41118494	41118496	100	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3422 3420 .
ChrX	stalkie_big_nohaplotig	exon	43000557	43003128	99	-	.	Parent=comp162042_c3_seq1.mrna1;Target=comp162042_c3_seq1 3419 837 .
ChrX	stalkie_big_nohaplotig	CDS	43003064	43003128	.	-	0	Parent=comp162042_c3_seq1.mrna1
ChrX	gffcl	locus	41037169	41037818	.	-	.	ID=RLOC_00002428;geneIDs=comp122795_c0_seq1.path1;transcripts=comp122795_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41037169	41037818	.	-	.	ID=comp122795_c0_seq1.mrna1;geneID=comp122795_c0_seq1.path1;Name=comp122795_c0_seq1;Dir=indeterminatecoverage=98.8;identity=96.7;matches=644;mismatches=6;indels=16;unknowns=0;Target=comp122795_c0_seq1 666 1 .;CDS_Target=comp122795_c0_seq1 282 169 .;locus=RLOC_00002428
ChrX	stalkie_big_nohaplotig	exon	41037169	41037818	96	-	.	Parent=comp122795_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	41037545	41037658	.	-	0	Parent=comp122795_c0_seq1.mrna1
ChrX	gffcl	locus	41043660	41044688	.	+	.	ID=RLOC_00002429;geneIDs=comp113758_c0_seq1.path1,comp144359_c0_seq1.path1;transcripts=comp113758_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41043725	41044688	.	+	.	ID=comp113758_c0_seq1.mrna1;geneID=comp113758_c0_seq1.path1;Name=comp113758_c0_seq1;Dir=sensecoverage=99.9;identity=97.9;matches=807;mismatches=7;indels=10;unknowns=0;Target=comp113758_c0_seq1 440 607 +;locus=RLOC_00002429
ChrX	stalkie_big_nohaplotig	exon	41043725	41043822	83	+	.	Parent=comp113758_c0_seq1.mrna1;Target=comp113758_c0_seq1 1 88 +
ChrX	stalkie_big_nohaplotig	exon	41043906	41044037	100	+	.	Parent=comp113758_c0_seq1.mrna1;Target=comp113758_c0_seq1 89 220 +
ChrX	stalkie_big_nohaplotig	exon	41044095	41044688	99	+	.	Parent=comp113758_c0_seq1.mrna1;Target=comp113758_c0_seq1 221 814 +
ChrX	stalkie_big_nohaplotig	CDS	41044314	41044481	.	+	0	Parent=comp113758_c0_seq1.mrna1
ChrX	gffcl	locus	41045719	42902818	.	.	.	ID=RLOC_00002430;geneIDs=comp116682_c0_seq1.path1,comp155528_c1_seq1.path1,comp191183_c0_seq1.path1;transcripts=comp155528_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41046446	42902818	.	+	.	ID=comp155528_c1_seq1.mrna1;geneID=comp155528_c1_seq1.path1;Name=comp155528_c1_seq1;Dir=indeterminatecoverage=97.4;identity=94.5;matches=1437;mismatches=42;indels=42;unknowns=0;Target=comp155528_c1_seq1 384 247 .;locus=RLOC_00002430
ChrX	stalkie_big_nohaplotig	exon	41046446	41047717	98	+	.	Parent=comp155528_c1_seq1.mrna1;Target=comp155528_c1_seq1 1281 1 .
ChrX	stalkie_big_nohaplotig	exon	42841653	42841657	100	+	.	Parent=comp155528_c1_seq1.mrna1;Target=comp155528_c1_seq1 1286 1282 .
ChrX	stalkie_big_nohaplotig	exon	42844576	42844584	100	+	.	Parent=comp155528_c1_seq1.mrna1;Target=comp155528_c1_seq1 1295 1287 .
ChrX	stalkie_big_nohaplotig	exon	42845245	42845248	100	+	.	Parent=comp155528_c1_seq1.mrna1;Target=comp155528_c1_seq1 1299 1296 .
ChrX	stalkie_big_nohaplotig	exon	42848830	42848833	100	+	.	Parent=comp155528_c1_seq1.mrna1;Target=comp155528_c1_seq1 1303 1300 .
ChrX	stalkie_big_nohaplotig	exon	42850545	42850554	100	+	.	Parent=comp155528_c1_seq1.mrna1;Target=comp155528_c1_seq1 1313 1304 .
ChrX	stalkie_big_nohaplotig	exon	42853343	42853353	100	+	.	Parent=comp155528_c1_seq1.mrna1;Target=comp155528_c1_seq1 1324 1314 .
ChrX	stalkie_big_nohaplotig	exon	42870246	42870292	48	+	.	Parent=comp155528_c1_seq1.mrna1;Target=comp155528_c1_seq1 1445 1382 .
ChrX	stalkie_big_nohaplotig	exon	42874246	42874259	78	+	.	Parent=comp155528_c1_seq1.mrna1;Target=comp155528_c1_seq1 1458 1446 .
ChrX	stalkie_big_nohaplotig	exon	42874682	42874687	100	+	.	Parent=comp155528_c1_seq1.mrna1;Target=comp155528_c1_seq1 1464 1459 .
ChrX	stalkie_big_nohaplotig	exon	42882705	42882711	100	+	.	Parent=comp155528_c1_seq1.mrna1;Target=comp155528_c1_seq1 1471 1465 .
ChrX	stalkie_big_nohaplotig	exon	42885472	42885477	100	+	.	Parent=comp155528_c1_seq1.mrna1;Target=comp155528_c1_seq1 1477 1472 .
ChrX	stalkie_big_nohaplotig	exon	42892716	42892778	56	+	.	Parent=comp155528_c1_seq1.mrna1;Target=comp155528_c1_seq1 1545 1478 .
ChrX	stalkie_big_nohaplotig	exon	42900108	42900109	100	+	.	Parent=comp155528_c1_seq1.mrna1;Target=comp155528_c1_seq1 1547 1546 .
ChrX	stalkie_big_nohaplotig	exon	42901451	42901458	100	+	.	Parent=comp155528_c1_seq1.mrna1;Target=comp155528_c1_seq1 1555 1548 .
ChrX	stalkie_big_nohaplotig	exon	42901466	42901473	100	+	.	Parent=comp155528_c1_seq1.mrna1;Target=comp155528_c1_seq1 1605 1598 .
ChrX	stalkie_big_nohaplotig	exon	42902811	42902818	100	+	.	Parent=comp155528_c1_seq1.mrna1;Target=comp155528_c1_seq1 1613 1606 .
ChrX	stalkie_big_nohaplotig	CDS	41046693	41046830	.	+	0	Parent=comp155528_c1_seq1.mrna1
ChrX	gffcl	locus	41049576	41102746	.	-	.	ID=RLOC_00002431;geneIDs=FBgn0053113.2.path1,comp135146_c0_seq1.path1,comp148923_c0_seq1.path1;transcripts=FBgn0053113.2.mrna1,comp148923_c0_seq1.mrna1,comp135146_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41049576	41102746	.	-	.	ID=FBgn0053113.2.mrna1;geneID=FBgn0053113.2.path1;Name=FBgn0053113.2;Dir=sensecoverage=100.0;identity=99.9;matches=707;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002431
ChrX	stalkie_big_nohaplotig	exon	41049576	41049639	100	-	.	Parent=FBgn0053113.2.mrna1;Target=FBgn0053113.2 645 708 +
ChrX	stalkie_big_nohaplotig	exon	41049701	41049806	100	-	.	Parent=FBgn0053113.2.mrna1;Target=FBgn0053113.2 539 644 +
ChrX	stalkie_big_nohaplotig	exon	41051524	41051732	100	-	.	Parent=FBgn0053113.2.mrna1;Target=FBgn0053113.2 330 538 +
ChrX	stalkie_big_nohaplotig	exon	41051793	41052000	99	-	.	Parent=FBgn0053113.2.mrna1;Target=FBgn0053113.2 122 329 +
ChrX	stalkie_big_nohaplotig	exon	41102227	41102262	100	-	.	Parent=FBgn0053113.2.mrna1;Target=FBgn0053113.2 86 121 +
ChrX	stalkie_big_nohaplotig	exon	41102662	41102746	100	-	.	Parent=FBgn0053113.2.mrna1;Target=FBgn0053113.2 1 85 +
ChrX	stalkie_big_nohaplotig	CDS	41049576	41049639	.	-	1	Parent=FBgn0053113.2.mrna1;Target=FBgn0053113.2 645 708 +
ChrX	stalkie_big_nohaplotig	CDS	41049701	41049806	.	-	2	Parent=FBgn0053113.2.mrna1;Target=FBgn0053113.2 539 644 +
ChrX	stalkie_big_nohaplotig	CDS	41051524	41051732	.	-	1	Parent=FBgn0053113.2.mrna1;Target=FBgn0053113.2 330 538 +
ChrX	stalkie_big_nohaplotig	CDS	41051793	41052000	.	-	2	Parent=FBgn0053113.2.mrna1;Target=FBgn0053113.2 122 329 +
ChrX	stalkie_big_nohaplotig	CDS	41102227	41102262	.	-	2	Parent=FBgn0053113.2.mrna1;Target=FBgn0053113.2 86 121 +
ChrX	stalkie_big_nohaplotig	CDS	41102662	41102746	.	-	0	Parent=FBgn0053113.2.mrna1;Target=FBgn0053113.2 1 85 +
ChrX	stalkie_big_nohaplotig	mRNA	41051977	41054788	.	-	.	ID=comp148923_c0_seq1.mrna1;geneID=comp148923_c0_seq1.path1;Name=comp148923_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=430;mismatches=0;indels=0;unknowns=0;Target=comp148923_c0_seq1 354 428 .;locus=RLOC_00002431
ChrX	stalkie_big_nohaplotig	exon	41051977	41052000	100	-	.	Parent=comp148923_c0_seq1.mrna1;Target=comp148923_c0_seq1 1 24 -
ChrX	stalkie_big_nohaplotig	exon	41054383	41054788	100	-	.	Parent=comp148923_c0_seq1.mrna1;Target=comp148923_c0_seq1 25 430 -
ChrX	stalkie_big_nohaplotig	CDS	41054712	41054786	.	-	0	Parent=comp148923_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41100473	41102250	.	-	.	ID=comp135146_c0_seq1.mrna1;geneID=comp135146_c0_seq1.path1;Name=comp135146_c0_seq1;Dir=sensecoverage=100.0;identity=96.1;matches=271;mismatches=11;indels=0;unknowns=0;Target=comp135146_c0_seq1 205 282 +;locus=RLOC_00002431
ChrX	stalkie_big_nohaplotig	exon	41100473	41100730	95	-	.	Parent=comp135146_c0_seq1.mrna1;Target=comp135146_c0_seq1 25 282 +
ChrX	stalkie_big_nohaplotig	exon	41102227	41102250	100	-	.	Parent=comp135146_c0_seq1.mrna1;Target=comp135146_c0_seq1 1 24 +
ChrX	stalkie_big_nohaplotig	CDS	41100473	41100550	.	-	0	Parent=comp135146_c0_seq1.mrna1
ChrX	gffcl	locus	41080468	41080795	.	+	.	ID=RLOC_00002432;geneIDs=comp150862_c0_seq1.path1;transcripts=comp150862_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41080468	41080795	.	+	.	ID=comp150862_c0_seq1.mrna1;geneID=comp150862_c0_seq1.path1;Name=comp150862_c0_seq1;Dir=indeterminatecoverage=96.2;identity=99.4;matches=326;mismatches=2;indels=0;unknowns=0;Target=comp150862_c0_seq1 328 1 .;CDS_Target=comp150862_c0_seq1 238 170 .;locus=RLOC_00002432
ChrX	stalkie_big_nohaplotig	exon	41080468	41080795	99	+	.	Parent=comp150862_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	41080637	41080705	.	+	0	Parent=comp150862_c0_seq1.mrna1
ChrX	gffcl	locus	41103438	41105282	.	-	.	ID=RLOC_00002433;geneIDs=comp113436_c0_seq1.path1;transcripts=comp113436_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41103438	41105282	.	-	.	ID=comp113436_c0_seq1.mrna1;geneID=comp113436_c0_seq1.path1;Name=comp113436_c0_seq1;Dir=antisensecoverage=100.0;identity=98.2;matches=328;mismatches=6;indels=0;unknowns=0;Target=comp113436_c0_seq1 238 333 .;locus=RLOC_00002433
ChrX	stalkie_big_nohaplotig	exon	41103438	41103461	100	-	.	Parent=comp113436_c0_seq1.mrna1;Target=comp113436_c0_seq1 1 24 -
ChrX	stalkie_big_nohaplotig	exon	41104973	41105282	98	-	.	Parent=comp113436_c0_seq1.mrna1;Target=comp113436_c0_seq1 25 334 -
ChrX	stalkie_big_nohaplotig	CDS	41105186	41105281	.	-	0	Parent=comp113436_c0_seq1.mrna1
ChrX	gffcl	locus	41124182	41149237	.	+	.	ID=RLOC_00002434;geneIDs=FBgn0002524.1.path1,comp151635_c0_seq1.path1;transcripts=FBgn0002524.1.mrna1,comp151635_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41124182	41149237	.	+	.	ID=FBgn0002524.1.mrna1;geneID=FBgn0002524.1.path1;Name=FBgn0002524.1;Dir=sensecoverage=100.0;identity=99.3;matches=1886;mismatches=13;indels=0;unknowns=0;locus=RLOC_00002434
ChrX	stalkie_big_nohaplotig	exon	41124182	41124496	98	+	.	Parent=FBgn0002524.1.mrna1;Target=FBgn0002524.1 1 315 +
ChrX	stalkie_big_nohaplotig	exon	41147522	41148628	99	+	.	Parent=FBgn0002524.1.mrna1;Target=FBgn0002524.1 316 1422 +
ChrX	stalkie_big_nohaplotig	exon	41148696	41148958	99	+	.	Parent=FBgn0002524.1.mrna1;Target=FBgn0002524.1 1423 1685 +
ChrX	stalkie_big_nohaplotig	exon	41149024	41149237	99	+	.	Parent=FBgn0002524.1.mrna1;Target=FBgn0002524.1 1686 1899 +
ChrX	stalkie_big_nohaplotig	CDS	41124182	41124496	.	+	0	Parent=FBgn0002524.1.mrna1;Target=FBgn0002524.1 1 315 +
ChrX	stalkie_big_nohaplotig	CDS	41147522	41148628	.	+	0	Parent=FBgn0002524.1.mrna1;Target=FBgn0002524.1 316 1422 +
ChrX	stalkie_big_nohaplotig	CDS	41148696	41148958	.	+	0	Parent=FBgn0002524.1.mrna1;Target=FBgn0002524.1 1423 1685 +
ChrX	stalkie_big_nohaplotig	CDS	41149024	41149237	.	+	1	Parent=FBgn0002524.1.mrna1;Target=FBgn0002524.1 1686 1899 +
ChrX	stalkie_big_nohaplotig	mRNA	41124473	41125127	.	+	.	ID=comp151635_c0_seq1.mrna1;geneID=comp151635_c0_seq1.path1;Name=comp151635_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.0;matches=642;mismatches=6;indels=21;unknowns=0;Target=comp151635_c0_seq1 662 1 .;CDS_Target=comp151635_c0_seq1 610 545 .;locus=RLOC_00002434
ChrX	stalkie_big_nohaplotig	exon	41124473	41125127	95	+	.	Parent=comp151635_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	41125010	41125075	.	+	0	Parent=comp151635_c0_seq1.mrna1
ChrX	gffcl	locus	41149776	41151004	.	-	.	ID=RLOC_00002435;geneIDs=comp156336_c0_seq1.path1;transcripts=comp156336_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41149776	41151004	.	-	.	ID=comp156336_c0_seq1.mrna1;geneID=comp156336_c0_seq1.path1;Name=comp156336_c0_seq1;Dir=indeterminatecoverage=98.7;identity=96.8;matches=1205;mismatches=23;indels=17;unknowns=0;Target=comp156336_c0_seq1 1261 18 .;CDS_Target=comp156336_c0_seq1 659 486 .;locus=RLOC_00002435
ChrX	stalkie_big_nohaplotig	exon	41149776	41151004	96	-	.	Parent=comp156336_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	41150364	41150537	.	-	0	Parent=comp156336_c0_seq1.mrna1
ChrX	gffcl	locus	41176560	41178353	.	+	.	ID=RLOC_00002436;geneIDs=FBgn0263993.1.path1;transcripts=FBgn0263993.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41176560	41178353	.	+	.	ID=FBgn0263993.1.mrna1;geneID=FBgn0263993.1.path1;Name=FBgn0263993.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1794;mismatches=0;indels=0;unknowns=0;Target=FBgn0263993.1 1794 1 .;locus=RLOC_00002436
ChrX	stalkie_big_nohaplotig	exon	41176560	41178353	100	+	.	Parent=FBgn0263993.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	41176560	41178353	.	+	0	Parent=FBgn0263993.1.mrna1
ChrX	gffcl	locus	41192279	41192775	.	+	.	ID=RLOC_00002437;geneIDs=comp138784_c0_seq1.path1;transcripts=comp138784_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41192279	41192775	.	+	.	ID=comp138784_c0_seq1.mrna1;geneID=comp138784_c0_seq1.path1;Name=comp138784_c0_seq1;Dir=antisensecoverage=89.6;identity=91.9;matches=385;mismatches=19;indels=15;unknowns=0;locus=RLOC_00002437
ChrX	stalkie_big_nohaplotig	exon	41192279	41192413	91	+	.	Parent=comp138784_c0_seq1.mrna1;Target=comp138784_c0_seq1 298 422 -
ChrX	stalkie_big_nohaplotig	exon	41192492	41192775	92	+	.	Parent=comp138784_c0_seq1.mrna1;Target=comp138784_c0_seq1 19 297 -
ChrX	stalkie_big_nohaplotig	CDS	41192280	41192413	.	+	0	Parent=comp138784_c0_seq1.mrna1;Target=comp138784_c0_seq1 298 421 .
ChrX	stalkie_big_nohaplotig	CDS	41192492	41192618	.	+	1	Parent=comp138784_c0_seq1.mrna1;Target=comp138784_c0_seq1 176 297 .
ChrX	gffcl	locus	41241928	41242410	.	-	.	ID=RLOC_00002438;geneIDs=comp135074_c0_seq1.path1;transcripts=comp135074_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41241928	41242410	.	-	.	ID=comp135074_c0_seq1.mrna1;geneID=comp135074_c0_seq1.path1;Name=comp135074_c0_seq1;Dir=antisensecoverage=99.8;identity=97.9;matches=416;mismatches=2;indels=7;unknowns=0;locus=RLOC_00002438
ChrX	stalkie_big_nohaplotig	exon	41241928	41242065	100	-	.	Parent=comp135074_c0_seq1.mrna1;Target=comp135074_c0_seq1 2 139 -
ChrX	stalkie_big_nohaplotig	exon	41242124	41242410	96	-	.	Parent=comp135074_c0_seq1.mrna1;Target=comp135074_c0_seq1 140 419 -
ChrX	stalkie_big_nohaplotig	CDS	41242030	41242065	.	-	0	Parent=comp135074_c0_seq1.mrna1;Target=comp135074_c0_seq1 104 139 .
ChrX	stalkie_big_nohaplotig	CDS	41242124	41242228	.	-	0	Parent=comp135074_c0_seq1.mrna1;Target=comp135074_c0_seq1 140 244 .
ChrX	gffcl	locus	41244112	41244594	.	+	.	ID=RLOC_00002439;geneIDs=comp135074_c0_seq1.path2;transcripts=comp135074_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	41244112	41244594	.	+	.	ID=comp135074_c0_seq1.mrna2;geneID=comp135074_c0_seq1.path2;Name=comp135074_c0_seq1;Dir=antisensecoverage=99.8;identity=97.6;matches=415;mismatches=3;indels=7;unknowns=0;locus=RLOC_00002439
ChrX	stalkie_big_nohaplotig	exon	41244112	41244398	96	+	.	Parent=comp135074_c0_seq1.mrna2;Target=comp135074_c0_seq1 140 419 -
ChrX	stalkie_big_nohaplotig	exon	41244457	41244594	99	+	.	Parent=comp135074_c0_seq1.mrna2;Target=comp135074_c0_seq1 2 139 -
ChrX	stalkie_big_nohaplotig	CDS	41244294	41244398	.	+	0	Parent=comp135074_c0_seq1.mrna2;Target=comp135074_c0_seq1 140 244 .
ChrX	stalkie_big_nohaplotig	CDS	41244457	41244492	.	+	0	Parent=comp135074_c0_seq1.mrna2;Target=comp135074_c0_seq1 104 139 .
ChrX	gffcl	locus	41299362	41306638	.	-	.	ID=RLOC_00002441;geneIDs=FBgn0028518.4.path1,comp160899_c0_seq1.path1;transcripts=comp160899_c0_seq1.mrna1,FBgn0028518.4.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41299362	41306638	.	-	.	ID=comp160899_c0_seq1.mrna1;geneID=comp160899_c0_seq1.path1;Name=comp160899_c0_seq1;Dir=sensecoverage=100.0;identity=98.7;matches=1490;mismatches=15;indels=4;unknowns=0;locus=RLOC_00002441
ChrX	stalkie_big_nohaplotig	exon	41299362	41299666	97	-	.	Parent=comp160899_c0_seq1.mrna1;Target=comp160899_c0_seq1 1201 1509 +
ChrX	stalkie_big_nohaplotig	exon	41299725	41300592	99	-	.	Parent=comp160899_c0_seq1.mrna1;Target=comp160899_c0_seq1 333 1200 +
ChrX	stalkie_big_nohaplotig	exon	41300715	41300817	98	-	.	Parent=comp160899_c0_seq1.mrna1;Target=comp160899_c0_seq1 230 332 +
ChrX	stalkie_big_nohaplotig	exon	41306410	41306638	97	-	.	Parent=comp160899_c0_seq1.mrna1;Target=comp160899_c0_seq1 1 229 +
ChrX	stalkie_big_nohaplotig	CDS	41299596	41299666	.	-	2	Parent=comp160899_c0_seq1.mrna1;Target=comp160899_c0_seq1 1201 1271 +
ChrX	stalkie_big_nohaplotig	CDS	41299725	41300592	.	-	0	Parent=comp160899_c0_seq1.mrna1;Target=comp160899_c0_seq1 333 1200 +
ChrX	stalkie_big_nohaplotig	CDS	41300715	41300817	.	-	1	Parent=comp160899_c0_seq1.mrna1;Target=comp160899_c0_seq1 230 332 +
ChrX	stalkie_big_nohaplotig	CDS	41306410	41306552	.	-	0	Parent=comp160899_c0_seq1.mrna1;Target=comp160899_c0_seq1 87 229 +
ChrX	stalkie_big_nohaplotig	mRNA	41299599	41302380	.	-	.	ID=FBgn0028518.4.mrna1;geneID=FBgn0028518.4.path1;Name=FBgn0028518.4;Dir=sensecoverage=99.3;identity=99.6;matches=1225;mismatches=5;indels=0;unknowns=0;locus=RLOC_00002441
ChrX	stalkie_big_nohaplotig	exon	41299599	41299666	100	-	.	Parent=FBgn0028518.4.mrna1;Target=FBgn0028518.4 1172 1239 +
ChrX	stalkie_big_nohaplotig	exon	41299725	41300592	99	-	.	Parent=FBgn0028518.4.mrna1;Target=FBgn0028518.4 304 1171 +
ChrX	stalkie_big_nohaplotig	exon	41300715	41300817	98	-	.	Parent=FBgn0028518.4.mrna1;Target=FBgn0028518.4 201 303 +
ChrX	stalkie_big_nohaplotig	exon	41302190	41302380	100	-	.	Parent=FBgn0028518.4.mrna1;Target=FBgn0028518.4 10 200 +
ChrX	stalkie_big_nohaplotig	CDS	41299599	41299666	.	-	2	Parent=FBgn0028518.4.mrna1;Target=FBgn0028518.4 1172 1239 +
ChrX	stalkie_big_nohaplotig	CDS	41299725	41300592	.	-	0	Parent=FBgn0028518.4.mrna1;Target=FBgn0028518.4 304 1171 +
ChrX	stalkie_big_nohaplotig	CDS	41300715	41300817	.	-	1	Parent=FBgn0028518.4.mrna1;Target=FBgn0028518.4 201 303 +
ChrX	stalkie_big_nohaplotig	CDS	41302190	41302380	.	-	0	Parent=FBgn0028518.4.mrna1;Target=FBgn0028518.4 10 200 +
ChrX	gffcl	locus	41321671	41322656	.	-	.	ID=RLOC_00002442;geneIDs=FBgn0028847.2.path1;transcripts=FBgn0028847.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41321671	41322656	.	-	.	ID=FBgn0028847.2.mrna1;geneID=FBgn0028847.2.path1;Name=FBgn0028847.2;Dir=indeterminatecoverage=99.9;identity=99.6;matches=982;mismatches=4;indels=0;unknowns=0;Target=FBgn0028847.2 986 1 .;CDS_Target=FBgn0028847.2 984 1 .;locus=RLOC_00002442
ChrX	stalkie_big_nohaplotig	exon	41321671	41322656	99	-	.	Parent=FBgn0028847.2.mrna1
ChrX	stalkie_big_nohaplotig	CDS	41321673	41322656	.	-	0	Parent=FBgn0028847.2.mrna1
ChrX	gffcl	locus	41453537	41454422	.	+	.	ID=RLOC_00002443;geneIDs=comp157053_c0_seq1.path1;transcripts=comp157053_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41453537	41454422	.	+	.	ID=comp157053_c0_seq1.mrna1;geneID=comp157053_c0_seq1.path1;Name=comp157053_c0_seq1;Dir=sensecoverage=99.6;identity=99.3;matches=811;mismatches=5;indels=1;unknowns=0;locus=RLOC_00002443
ChrX	stalkie_big_nohaplotig	exon	41453537	41454033	100	+	.	Parent=comp157053_c0_seq1.mrna1;Target=comp157053_c0_seq1 4 500 +
ChrX	stalkie_big_nohaplotig	exon	41454103	41454422	98	+	.	Parent=comp157053_c0_seq1.mrna1;Target=comp157053_c0_seq1 501 819 +
ChrX	stalkie_big_nohaplotig	CDS	41453671	41454033	.	+	0	Parent=comp157053_c0_seq1.mrna1;Target=comp157053_c0_seq1 138 500 +
ChrX	stalkie_big_nohaplotig	CDS	41454103	41454252	.	+	0	Parent=comp157053_c0_seq1.mrna1;Target=comp157053_c0_seq1 501 650 +
ChrX	gffcl	locus	41543791	41544753	.	-	.	ID=RLOC_00002445;geneIDs=comp151515_c0_seq1.path1;transcripts=comp151515_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41543791	41544753	.	-	.	ID=comp151515_c0_seq1.mrna1;geneID=comp151515_c0_seq1.path1;Name=comp151515_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=963;mismatches=0;indels=0;unknowns=0;Target=comp151515_c0_seq1 963 1 .;CDS_Target=comp151515_c0_seq1 563 348 .;locus=RLOC_00002445
ChrX	stalkie_big_nohaplotig	exon	41543791	41544753	100	-	.	Parent=comp151515_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	41544191	41544406	.	-	0	Parent=comp151515_c0_seq1.mrna1
ChrX	gffcl	locus	41604086	41604873	.	-	.	ID=RLOC_00002446;geneIDs=ORF2917.path1;transcripts=ORF2917.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41604086	41604873	.	-	.	ID=ORF2917.mrna1;geneID=ORF2917.path1;Name=ORF2917;Dir=indeterminatecoverage=100.0;identity=98.9;matches=780;mismatches=8;indels=1;unknowns=0;Target=ORF2917 789 1 .;CDS_Target=ORF2917 170 3 .;locus=RLOC_00002446
ChrX	stalkie_big_nohaplotig	exon	41604086	41604873	98	-	.	Parent=ORF2917.mrna1
ChrX	stalkie_big_nohaplotig	CDS	41604705	41604871	.	-	0	Parent=ORF2917.mrna1
ChrX	gffcl	locus	41621901	41622887	.	+	.	ID=RLOC_00002447;geneIDs=FBgn0036546.3.path1;transcripts=FBgn0036546.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41621901	41622887	.	+	.	ID=FBgn0036546.3.mrna1;geneID=FBgn0036546.3.path1;Name=FBgn0036546.3;Dir=indeterminatecoverage=100.0;identity=98.4;matches=971;mismatches=16;indels=0;unknowns=0;Target=FBgn0036546.3 987 1 .;locus=RLOC_00002447
ChrX	stalkie_big_nohaplotig	exon	41621901	41622887	98	+	.	Parent=FBgn0036546.3.mrna1
ChrX	stalkie_big_nohaplotig	CDS	41621901	41622887	.	+	0	Parent=FBgn0036546.3.mrna1
ChrX	gffcl	locus	41648795	41657042	.	-	.	ID=RLOC_00002448;geneIDs=FBgn0028950.2.path1;transcripts=FBgn0028950.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41648795	41657042	.	-	.	ID=FBgn0028950.2.mrna1;geneID=FBgn0028950.2.path1;Name=FBgn0028950.2;Dir=sensecoverage=98.4;identity=99.8;matches=860;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002448
ChrX	stalkie_big_nohaplotig	exon	41648795	41649333	99	-	.	Parent=FBgn0028950.2.mrna1;Target=FBgn0028950.2 338 876 +
ChrX	stalkie_big_nohaplotig	exon	41656720	41657042	100	-	.	Parent=FBgn0028950.2.mrna1;Target=FBgn0028950.2 15 337 +
ChrX	stalkie_big_nohaplotig	CDS	41648795	41649333	.	-	2	Parent=FBgn0028950.2.mrna1;Target=FBgn0028950.2 338 876 +
ChrX	stalkie_big_nohaplotig	CDS	41656720	41657041	.	-	0	Parent=FBgn0028950.2.mrna1;Target=FBgn0028950.2 16 337 +
ChrX	gffcl	locus	41670166	41670983	.	-	.	ID=RLOC_00002449;geneIDs=FBgn0028949.1.path1;transcripts=FBgn0028949.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41670166	41670983	.	-	.	ID=FBgn0028949.1.mrna1;geneID=FBgn0028949.1.path1;Name=FBgn0028949.1;Dir=sensecoverage=100.0;identity=98.6;matches=750;mismatches=7;indels=4;unknowns=0;locus=RLOC_00002449
ChrX	stalkie_big_nohaplotig	exon	41670166	41670710	99	-	.	Parent=FBgn0028949.1.mrna1;Target=FBgn0028949.1 215 759 +
ChrX	stalkie_big_nohaplotig	exon	41670770	41670983	97	-	.	Parent=FBgn0028949.1.mrna1;Target=FBgn0028949.1 1 214 +
ChrX	stalkie_big_nohaplotig	CDS	41670166	41670710	.	-	2	Parent=FBgn0028949.1.mrna1;Target=FBgn0028949.1 215 759 +
ChrX	stalkie_big_nohaplotig	CDS	41670770	41670983	.	-	0	Parent=FBgn0028949.1.mrna1;Target=FBgn0028949.1 1 214 +
ChrX	gffcl	locus	41680294	41681223	.	-	.	ID=RLOC_00002450;geneIDs=FBgn0028950.1.path1;transcripts=FBgn0028950.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41680294	41681223	.	-	.	ID=FBgn0028950.1.mrna1;geneID=FBgn0028950.1.path1;Name=FBgn0028950.1;Dir=sensecoverage=100.0;identity=100.0;matches=867;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002450
ChrX	stalkie_big_nohaplotig	exon	41680294	41680823	100	-	.	Parent=FBgn0028950.1.mrna1;Target=FBgn0028950.1 338 867 +
ChrX	stalkie_big_nohaplotig	exon	41680887	41681223	100	-	.	Parent=FBgn0028950.1.mrna1;Target=FBgn0028950.1 1 337 +
ChrX	stalkie_big_nohaplotig	CDS	41680294	41680823	.	-	2	Parent=FBgn0028950.1.mrna1;Target=FBgn0028950.1 338 867 +
ChrX	stalkie_big_nohaplotig	CDS	41680887	41681223	.	-	0	Parent=FBgn0028950.1.mrna1;Target=FBgn0028950.1 1 337 +
ChrX	gffcl	locus	41699476	41700197	.	+	.	ID=RLOC_00002451;geneIDs=comp84393_c0_seq1.path1;transcripts=comp84393_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41699476	41700197	.	+	.	ID=comp84393_c0_seq1.mrna1;geneID=comp84393_c0_seq1.path1;Name=comp84393_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=722;mismatches=0;indels=0;unknowns=0;Target=comp84393_c0_seq1 722 1 .;CDS_Target=comp84393_c0_seq1 150 70 .;locus=RLOC_00002451
ChrX	stalkie_big_nohaplotig	exon	41699476	41700197	100	+	.	Parent=comp84393_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	41699545	41699625	.	+	0	Parent=comp84393_c0_seq1.mrna1
ChrX	gffcl	locus	41703147	41708523	.	+	.	ID=RLOC_00002452;geneIDs=FBgn0031853.11.path1;transcripts=FBgn0031853.11.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41703147	41708523	.	+	.	ID=FBgn0031853.11.mrna1;geneID=FBgn0031853.11.path1;Name=FBgn0031853.11;Dir=sensecoverage=100.0;identity=99.1;matches=2937;mismatches=27;indels=0;unknowns=0;locus=RLOC_00002452
ChrX	stalkie_big_nohaplotig	exon	41703147	41703170	100	+	.	Parent=FBgn0031853.11.mrna1;Target=FBgn0031853.11 1 24 +
ChrX	stalkie_big_nohaplotig	exon	41705451	41707665	99	+	.	Parent=FBgn0031853.11.mrna1;Target=FBgn0031853.11 25 2239 +
ChrX	stalkie_big_nohaplotig	exon	41707799	41708523	99	+	.	Parent=FBgn0031853.11.mrna1;Target=FBgn0031853.11 2240 2964 +
ChrX	stalkie_big_nohaplotig	CDS	41703147	41703170	.	+	0	Parent=FBgn0031853.11.mrna1;Target=FBgn0031853.11 1 24 +
ChrX	stalkie_big_nohaplotig	CDS	41705451	41707665	.	+	0	Parent=FBgn0031853.11.mrna1;Target=FBgn0031853.11 25 2239 +
ChrX	stalkie_big_nohaplotig	CDS	41707799	41708523	.	+	2	Parent=FBgn0031853.11.mrna1;Target=FBgn0031853.11 2240 2964 +
ChrX	gffcl	locus	41712353	41713744	.	+	.	ID=RLOC_00002453;geneIDs=ORF1997.path1;transcripts=ORF1997.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41712353	41713744	.	+	.	ID=ORF1997.mrna1;geneID=ORF1997.path1;Name=ORF1997;Dir=sensecoverage=100.0;identity=100.0;matches=942;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002453
ChrX	stalkie_big_nohaplotig	exon	41712353	41712418	100	+	.	Parent=ORF1997.mrna1;Target=ORF1997 1 66 +
ChrX	stalkie_big_nohaplotig	exon	41712489	41712554	100	+	.	Parent=ORF1997.mrna1;Target=ORF1997 67 132 +
ChrX	stalkie_big_nohaplotig	exon	41712935	41713744	100	+	.	Parent=ORF1997.mrna1;Target=ORF1997 133 942 +
ChrX	stalkie_big_nohaplotig	CDS	41712353	41712418	.	+	0	Parent=ORF1997.mrna1;Target=ORF1997 1 66 +
ChrX	stalkie_big_nohaplotig	CDS	41712489	41712554	.	+	0	Parent=ORF1997.mrna1;Target=ORF1997 67 132 +
ChrX	stalkie_big_nohaplotig	CDS	41712935	41713744	.	+	0	Parent=ORF1997.mrna1;Target=ORF1997 133 942 +
ChrX	gffcl	locus	41717744	41727372	.	+	.	ID=RLOC_00002454;geneIDs=FBgn0028518.2.path1;transcripts=FBgn0028518.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41717744	41727372	.	+	.	ID=FBgn0028518.2.mrna1;geneID=FBgn0028518.2.path1;Name=FBgn0028518.2;Dir=sensecoverage=100.0;identity=99.4;matches=1754;mismatches=10;indels=0;unknowns=0;locus=RLOC_00002454
ChrX	stalkie_big_nohaplotig	exon	41717744	41717910	99	+	.	Parent=FBgn0028518.2.mrna1;Target=FBgn0028518.2 1 167 +
ChrX	stalkie_big_nohaplotig	exon	41725605	41725707	99	+	.	Parent=FBgn0028518.2.mrna1;Target=FBgn0028518.2 168 270 +
ChrX	stalkie_big_nohaplotig	exon	41725771	41726746	99	+	.	Parent=FBgn0028518.2.mrna1;Target=FBgn0028518.2 271 1246 +
ChrX	stalkie_big_nohaplotig	exon	41726855	41727372	99	+	.	Parent=FBgn0028518.2.mrna1;Target=FBgn0028518.2 1247 1764 +
ChrX	stalkie_big_nohaplotig	CDS	41717744	41717910	.	+	0	Parent=FBgn0028518.2.mrna1;Target=FBgn0028518.2 1 167 +
ChrX	stalkie_big_nohaplotig	CDS	41725605	41725707	.	+	1	Parent=FBgn0028518.2.mrna1;Target=FBgn0028518.2 168 270 +
ChrX	stalkie_big_nohaplotig	CDS	41725771	41726746	.	+	0	Parent=FBgn0028518.2.mrna1;Target=FBgn0028518.2 271 1246 +
ChrX	stalkie_big_nohaplotig	CDS	41726855	41727372	.	+	2	Parent=FBgn0028518.2.mrna1;Target=FBgn0028518.2 1247 1764 +
ChrX	gffcl	locus	41757677	41760425	.	+	.	ID=RLOC_00002455;geneIDs=FBgn0028518.3.path1;transcripts=FBgn0028518.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41757677	41760425	.	+	.	ID=FBgn0028518.3.mrna1;geneID=FBgn0028518.3.path1;Name=FBgn0028518.3;Dir=sensecoverage=98.8;identity=99.5;matches=1159;mismatches=6;indels=0;unknowns=0;locus=RLOC_00002455
ChrX	stalkie_big_nohaplotig	exon	41757677	41757856	98	+	.	Parent=FBgn0028518.3.mrna1;Target=FBgn0028518.3 15 194 +
ChrX	stalkie_big_nohaplotig	exon	41759324	41759426	99	+	.	Parent=FBgn0028518.3.mrna1;Target=FBgn0028518.3 195 297 +
ChrX	stalkie_big_nohaplotig	exon	41759489	41760302	99	+	.	Parent=FBgn0028518.3.mrna1;Target=FBgn0028518.3 298 1111 +
ChrX	stalkie_big_nohaplotig	exon	41760358	41760425	100	+	.	Parent=FBgn0028518.3.mrna1;Target=FBgn0028518.3 1112 1179 +
ChrX	stalkie_big_nohaplotig	CDS	41757678	41757856	.	+	0	Parent=FBgn0028518.3.mrna1;Target=FBgn0028518.3 16 194 +
ChrX	stalkie_big_nohaplotig	CDS	41759324	41759426	.	+	1	Parent=FBgn0028518.3.mrna1;Target=FBgn0028518.3 195 297 +
ChrX	stalkie_big_nohaplotig	CDS	41759489	41760302	.	+	0	Parent=FBgn0028518.3.mrna1;Target=FBgn0028518.3 298 1111 +
ChrX	stalkie_big_nohaplotig	CDS	41760358	41760425	.	+	2	Parent=FBgn0028518.3.mrna1;Target=FBgn0028518.3 1112 1179 +
ChrX	gffcl	locus	41764256	41765381	.	+	.	ID=RLOC_00002456;geneIDs=FBgn0028518.1.path1;transcripts=FBgn0028518.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41764256	41765381	.	+	.	ID=FBgn0028518.1.mrna1;geneID=FBgn0028518.1.path1;Name=FBgn0028518.1;Dir=sensecoverage=86.7;identity=99.9;matches=954;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002456
ChrX	stalkie_big_nohaplotig	exon	41764256	41764355	100	+	.	Parent=FBgn0028518.1.mrna1;Target=FBgn0028518.1 147 246 +
ChrX	stalkie_big_nohaplotig	exon	41764415	41765168	99	+	.	Parent=FBgn0028518.1.mrna1;Target=FBgn0028518.1 247 1000 +
ChrX	stalkie_big_nohaplotig	exon	41765281	41765381	100	+	.	Parent=FBgn0028518.1.mrna1;Target=FBgn0028518.1 1001 1101 +
ChrX	stalkie_big_nohaplotig	CDS	41764257	41764355	.	+	0	Parent=FBgn0028518.1.mrna1;Target=FBgn0028518.1 148 246 +
ChrX	stalkie_big_nohaplotig	CDS	41764415	41765168	.	+	0	Parent=FBgn0028518.1.mrna1;Target=FBgn0028518.1 247 1000 +
ChrX	stalkie_big_nohaplotig	CDS	41765281	41765381	.	+	2	Parent=FBgn0028518.1.mrna1;Target=FBgn0028518.1 1001 1101 +
ChrX	gffcl	locus	41880765	41900676	.	+	.	ID=RLOC_00002457;geneIDs=FBgn0004242.1.path1;transcripts=FBgn0004242.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41880765	41900676	.	+	.	ID=FBgn0004242.1.mrna1;geneID=FBgn0004242.1.path1;Name=FBgn0004242.1;Dir=sensecoverage=100.0;identity=99.8;matches=1326;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002457
ChrX	stalkie_big_nohaplotig	exon	41880765	41880960	100	+	.	Parent=FBgn0004242.1.mrna1;Target=FBgn0004242.1 1 196 +
ChrX	stalkie_big_nohaplotig	exon	41881039	41881304	100	+	.	Parent=FBgn0004242.1.mrna1;Target=FBgn0004242.1 197 462 +
ChrX	stalkie_big_nohaplotig	exon	41881362	41881457	100	+	.	Parent=FBgn0004242.1.mrna1;Target=FBgn0004242.1 463 558 +
ChrX	stalkie_big_nohaplotig	exon	41882666	41882860	100	+	.	Parent=FBgn0004242.1.mrna1;Target=FBgn0004242.1 559 753 +
ChrX	stalkie_big_nohaplotig	exon	41882932	41883108	100	+	.	Parent=FBgn0004242.1.mrna1;Target=FBgn0004242.1 754 930 +
ChrX	stalkie_big_nohaplotig	exon	41895183	41895297	99	+	.	Parent=FBgn0004242.1.mrna1;Target=FBgn0004242.1 931 1045 +
ChrX	stalkie_big_nohaplotig	exon	41900393	41900676	99	+	.	Parent=FBgn0004242.1.mrna1;Target=FBgn0004242.1 1046 1329 +
ChrX	stalkie_big_nohaplotig	CDS	41880765	41880960	.	+	0	Parent=FBgn0004242.1.mrna1;Target=FBgn0004242.1 1 196 +
ChrX	stalkie_big_nohaplotig	CDS	41881039	41881304	.	+	2	Parent=FBgn0004242.1.mrna1;Target=FBgn0004242.1 197 462 +
ChrX	stalkie_big_nohaplotig	CDS	41881362	41881457	.	+	0	Parent=FBgn0004242.1.mrna1;Target=FBgn0004242.1 463 558 +
ChrX	stalkie_big_nohaplotig	CDS	41882666	41882860	.	+	0	Parent=FBgn0004242.1.mrna1;Target=FBgn0004242.1 559 753 +
ChrX	stalkie_big_nohaplotig	CDS	41882932	41883108	.	+	0	Parent=FBgn0004242.1.mrna1;Target=FBgn0004242.1 754 930 +
ChrX	stalkie_big_nohaplotig	CDS	41895183	41895297	.	+	0	Parent=FBgn0004242.1.mrna1;Target=FBgn0004242.1 931 1045 +
ChrX	stalkie_big_nohaplotig	CDS	41900393	41900676	.	+	2	Parent=FBgn0004242.1.mrna1;Target=FBgn0004242.1 1046 1329 +
ChrX	gffcl	locus	41902661	41903187	.	-	.	ID=RLOC_00002458;geneIDs=comp158153_c0_seq1.path1;transcripts=comp158153_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41902661	41903187	.	-	.	ID=comp158153_c0_seq1.mrna1;geneID=comp158153_c0_seq1.path1;Name=comp158153_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=518;mismatches=5;indels=4;unknowns=0;Target=comp158153_c0_seq1 523 1 .;CDS_Target=comp158153_c0_seq1 353 225 .;locus=RLOC_00002458
ChrX	stalkie_big_nohaplotig	exon	41902661	41903187	98	-	.	Parent=comp158153_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	41902831	41902959	.	-	0	Parent=comp158153_c0_seq1.mrna1
ChrX	gffcl	locus	41904081	41905148	.	-	.	ID=RLOC_00002459;geneIDs=comp152649_c1_seq1.path1;transcripts=comp152649_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41904081	41905148	.	-	.	ID=comp152649_c1_seq1.mrna1;geneID=comp152649_c1_seq1.path1;Name=comp152649_c1_seq1;Dir=indeterminatecoverage=98.5;identity=99.7;matches=1066;mismatches=2;indels=1;unknowns=0;Target=comp152649_c1_seq1 1069 1 .;CDS_Target=comp152649_c1_seq1 238 77 .;locus=RLOC_00002459
ChrX	stalkie_big_nohaplotig	exon	41904081	41905148	99	-	.	Parent=comp152649_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	41904911	41905072	.	-	0	Parent=comp152649_c1_seq1.mrna1
ChrX	gffcl	locus	41905429	41905766	.	+	.	ID=RLOC_00002460;geneIDs=comp144721_c0_seq1.path1;transcripts=comp144721_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41905429	41905766	.	+	.	ID=comp144721_c0_seq1.mrna1;geneID=comp144721_c0_seq1.path1;Name=comp144721_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=337;mismatches=1;indels=0;unknowns=0;Target=comp144721_c0_seq1 338 1 .;CDS_Target=comp144721_c0_seq1 293 117 .;locus=RLOC_00002460
ChrX	stalkie_big_nohaplotig	exon	41905429	41905766	99	+	.	Parent=comp144721_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	41905545	41905721	.	+	0	Parent=comp144721_c0_seq1.mrna1
ChrX	gffcl	locus	41905852	41906882	.	+	.	ID=RLOC_00002461;geneIDs=comp156289_c0_seq1.path1;transcripts=comp156289_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41905852	41906882	.	+	.	ID=comp156289_c0_seq1.mrna1;geneID=comp156289_c0_seq1.path1;Name=comp156289_c0_seq1;Dir=indeterminatecoverage=99.8;identity=96.1;matches=1022;mismatches=9;indels=33;unknowns=0;Target=comp156289_c0_seq1 1064 1 .;CDS_Target=comp156289_c0_seq1 140 3 .;locus=RLOC_00002461
ChrX	stalkie_big_nohaplotig	exon	41905852	41906882	96	+	.	Parent=comp156289_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	41905854	41905991	.	+	0	Parent=comp156289_c0_seq1.mrna1
ChrX	gffcl	locus	41909451	41910491	.	+	.	ID=RLOC_00002462;geneIDs=comp134998_c0_seq1.path1;transcripts=comp134998_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41909451	41910491	.	+	.	ID=comp134998_c0_seq1.mrna1;geneID=comp134998_c0_seq1.path1;Name=comp134998_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.9;matches=1040;mismatches=1;indels=0;unknowns=0;Target=comp134998_c0_seq1 1044 4 .;CDS_Target=comp134998_c0_seq1 139 5 .;locus=RLOC_00002462
ChrX	stalkie_big_nohaplotig	exon	41909451	41910491	99	+	.	Parent=comp134998_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	41909452	41909586	.	+	0	Parent=comp134998_c0_seq1.mrna1
ChrX	gffcl	locus	41910683	41910940	.	-	.	ID=RLOC_00002463;geneIDs=comp147165_c3_seq1.path1;transcripts=comp147165_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41910683	41910940	.	-	.	ID=comp147165_c3_seq1.mrna1;geneID=comp147165_c3_seq1.path1;Name=comp147165_c3_seq1;Dir=indeterminatecoverage=99.2;identity=98.4;matches=254;mismatches=2;indels=2;unknowns=0;Target=comp147165_c3_seq1 258 3 .;CDS_Target=comp147165_c3_seq1 115 5 .;locus=RLOC_00002463
ChrX	stalkie_big_nohaplotig	exon	41910683	41910940	98	-	.	Parent=comp147165_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	41910827	41910938	.	-	0	Parent=comp147165_c3_seq1.mrna1
ChrX	gffcl	locus	41911027	41911811	.	-	.	ID=RLOC_00002464;geneIDs=comp155534_c0_seq1.path1;transcripts=comp155534_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41911027	41911811	.	-	.	ID=comp155534_c0_seq1.mrna1;geneID=comp155534_c0_seq1.path1;Name=comp155534_c0_seq1;Dir=indeterminatecoverage=95.2;identity=99.1;matches=780;mismatches=5;indels=2;unknowns=0;Target=comp155534_c0_seq1 827 41 .;CDS_Target=comp155534_c0_seq1 664 482 .;locus=RLOC_00002464
ChrX	stalkie_big_nohaplotig	exon	41911027	41911811	99	-	.	Parent=comp155534_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	41911190	41911372	.	-	0	Parent=comp155534_c0_seq1.mrna1
ChrX	gffcl	locus	41912468	41942468	.	.	.	ID=RLOC_00002465;geneIDs=comp135779_c0_seq1.path1,comp158937_c0_seq1.path1,comp1004993_c0_seq1.path1;transcripts=comp158937_c0_seq1.mrna1,comp135779_c0_seq1.mrna1,comp1004993_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41912468	41942468	.	-	.	ID=comp158937_c0_seq1.mrna1;geneID=comp158937_c0_seq1.path1;Name=comp158937_c0_seq1;Dir=indeterminatecoverage=71.4;identity=94.1;matches=950;mismatches=41;indels=19;unknowns=0;Target=comp158937_c0_seq1 1149 1048 .;locus=RLOC_00002465
ChrX	stalkie_big_nohaplotig	exon	41912468	41913290	97	-	.	Parent=comp158937_c0_seq1.mrna1;Target=comp158937_c0_seq1 1402 581 .
ChrX	stalkie_big_nohaplotig	exon	41916947	41916953	100	-	.	Parent=comp158937_c0_seq1.mrna1;Target=comp158937_c0_seq1 580 574 .
ChrX	stalkie_big_nohaplotig	exon	41924377	41924402	57	-	.	Parent=comp158937_c0_seq1.mrna1;Target=comp158937_c0_seq1 573 548 .
ChrX	stalkie_big_nohaplotig	exon	41925148	41925156	100	-	.	Parent=comp158937_c0_seq1.mrna1;Target=comp158937_c0_seq1 547 539 .
ChrX	stalkie_big_nohaplotig	exon	41928794	41928843	75	-	.	Parent=comp158937_c0_seq1.mrna1;Target=comp158937_c0_seq1 538 489 .
ChrX	stalkie_big_nohaplotig	exon	41930211	41930218	100	-	.	Parent=comp158937_c0_seq1.mrna1;Target=comp158937_c0_seq1 488 481 .
ChrX	stalkie_big_nohaplotig	exon	41932235	41932262	64	-	.	Parent=comp158937_c0_seq1.mrna1;Target=comp158937_c0_seq1 480 450 .
ChrX	stalkie_big_nohaplotig	exon	41932604	41932615	66	-	.	Parent=comp158937_c0_seq1.mrna1;Target=comp158937_c0_seq1 449 439 .
ChrX	stalkie_big_nohaplotig	exon	41935530	41935535	100	-	.	Parent=comp158937_c0_seq1.mrna1;Target=comp158937_c0_seq1 438 433 .
ChrX	stalkie_big_nohaplotig	exon	41936812	41936818	100	-	.	Parent=comp158937_c0_seq1.mrna1;Target=comp158937_c0_seq1 432 426 .
ChrX	stalkie_big_nohaplotig	exon	41937910	41937913	100	-	.	Parent=comp158937_c0_seq1.mrna1;Target=comp158937_c0_seq1 425 422 .
ChrX	stalkie_big_nohaplotig	exon	41941334	41941338	100	-	.	Parent=comp158937_c0_seq1.mrna1;Target=comp158937_c0_seq1 421 417 .
ChrX	stalkie_big_nohaplotig	exon	41942454	41942468	100	-	.	Parent=comp158937_c0_seq1.mrna1;Target=comp158937_c0_seq1 416 402 .
ChrX	stalkie_big_nohaplotig	CDS	41912722	41912823	.	-	0	Parent=comp158937_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41913270	41914090	.	-	.	ID=comp135779_c0_seq1.mrna1;geneID=comp135779_c0_seq1.path1;Name=comp135779_c0_seq1;Dir=indeterminatecoverage=98.9;identity=100.0;matches=821;mismatches=0;indels=0;unknowns=0;Target=comp135779_c0_seq1 830 10 .;CDS_Target=comp135779_c0_seq1 290 135 .;locus=RLOC_00002465
ChrX	stalkie_big_nohaplotig	exon	41913270	41914090	100	-	.	Parent=comp135779_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	41913810	41913965	.	-	0	Parent=comp135779_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41924050	41924522	.	+	.	ID=comp1004993_c0_seq1.mrna1;geneID=comp1004993_c0_seq1.path1;Name=comp1004993_c0_seq1;Dir=indeterminatecoverage=96.3;identity=98.9;matches=470;mismatches=3;indels=2;unknowns=0;Target=comp1004993_c0_seq1 475 1 .;CDS_Target=comp1004993_c0_seq1 292 146 .;locus=RLOC_00002465
ChrX	stalkie_big_nohaplotig	exon	41924050	41924522	98	+	.	Parent=comp1004993_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	41924195	41924341	.	+	0	Parent=comp1004993_c0_seq1.mrna1
ChrX	gffcl	locus	41921846	41961679	.	-	.	ID=RLOC_00002466;geneIDs=FBgn0000250.1.path1;transcripts=FBgn0000250.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41921846	41961679	.	-	.	ID=FBgn0000250.1.mrna1;geneID=FBgn0000250.1.path1;Name=FBgn0000250.1;Dir=sensecoverage=100.0;identity=100.0;matches=1050;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002466
ChrX	stalkie_big_nohaplotig	exon	41921846	41921893	100	-	.	Parent=FBgn0000250.1.mrna1;Target=FBgn0000250.1 1003 1050 +
ChrX	stalkie_big_nohaplotig	exon	41925232	41925486	100	-	.	Parent=FBgn0000250.1.mrna1;Target=FBgn0000250.1 748 1002 +
ChrX	stalkie_big_nohaplotig	exon	41925555	41925643	100	-	.	Parent=FBgn0000250.1.mrna1;Target=FBgn0000250.1 659 747 +
ChrX	stalkie_big_nohaplotig	exon	41956695	41956905	100	-	.	Parent=FBgn0000250.1.mrna1;Target=FBgn0000250.1 448 658 +
ChrX	stalkie_big_nohaplotig	exon	41957898	41958075	100	-	.	Parent=FBgn0000250.1.mrna1;Target=FBgn0000250.1 270 447 +
ChrX	stalkie_big_nohaplotig	exon	41961411	41961679	100	-	.	Parent=FBgn0000250.1.mrna1;Target=FBgn0000250.1 1 269 +
ChrX	stalkie_big_nohaplotig	CDS	41921846	41921893	.	-	0	Parent=FBgn0000250.1.mrna1;Target=FBgn0000250.1 1003 1050 +
ChrX	stalkie_big_nohaplotig	CDS	41925232	41925486	.	-	0	Parent=FBgn0000250.1.mrna1;Target=FBgn0000250.1 748 1002 +
ChrX	stalkie_big_nohaplotig	CDS	41925555	41925643	.	-	2	Parent=FBgn0000250.1.mrna1;Target=FBgn0000250.1 659 747 +
ChrX	stalkie_big_nohaplotig	CDS	41956695	41956905	.	-	0	Parent=FBgn0000250.1.mrna1;Target=FBgn0000250.1 448 658 +
ChrX	stalkie_big_nohaplotig	CDS	41957898	41958075	.	-	1	Parent=FBgn0000250.1.mrna1;Target=FBgn0000250.1 270 447 +
ChrX	stalkie_big_nohaplotig	CDS	41961411	41961679	.	-	0	Parent=FBgn0000250.1.mrna1;Target=FBgn0000250.1 1 269 +
ChrX	gffcl	locus	41962514	41969810	.	-	.	ID=RLOC_00002467;geneIDs=comp147928_c1_seq1.path1;transcripts=comp147928_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41962514	41969810	.	-	.	ID=comp147928_c1_seq1.mrna1;geneID=comp147928_c1_seq1.path1;Name=comp147928_c1_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=461;mismatches=0;indels=1;unknowns=0;locus=RLOC_00002467
ChrX	stalkie_big_nohaplotig	exon	41962514	41962682	99	-	.	Parent=comp147928_c1_seq1.mrna1;Target=comp147928_c1_seq1 1 170 -
ChrX	stalkie_big_nohaplotig	exon	41969519	41969810	100	-	.	Parent=comp147928_c1_seq1.mrna1;Target=comp147928_c1_seq1 171 462 -
ChrX	stalkie_big_nohaplotig	CDS	41962593	41962682	.	-	0	Parent=comp147928_c1_seq1.mrna1;Target=comp147928_c1_seq1 81 170 .
ChrX	stalkie_big_nohaplotig	CDS	41969519	41969617	.	-	0	Parent=comp147928_c1_seq1.mrna1;Target=comp147928_c1_seq1 171 269 .
ChrX	gffcl	locus	41977893	41978837	.	+	.	ID=RLOC_00002468;geneIDs=FBgn0001995.1.path1;transcripts=FBgn0001995.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41977893	41978837	.	+	.	ID=FBgn0001995.1.mrna1;geneID=FBgn0001995.1.path1;Name=FBgn0001995.1;Dir=sensecoverage=100.0;identity=100.0;matches=873;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002468
ChrX	stalkie_big_nohaplotig	exon	41977893	41978548	100	+	.	Parent=FBgn0001995.1.mrna1;Target=FBgn0001995.1 1 656 +
ChrX	stalkie_big_nohaplotig	exon	41978621	41978837	100	+	.	Parent=FBgn0001995.1.mrna1;Target=FBgn0001995.1 657 873 +
ChrX	stalkie_big_nohaplotig	CDS	41977893	41978548	.	+	0	Parent=FBgn0001995.1.mrna1;Target=FBgn0001995.1 1 656 +
ChrX	stalkie_big_nohaplotig	CDS	41978621	41978837	.	+	1	Parent=FBgn0001995.1.mrna1;Target=FBgn0001995.1 657 873 +
ChrX	gffcl	locus	41990063	41990392	.	-	.	ID=RLOC_00002469;geneIDs=comp115641_c0_seq1.path1;transcripts=comp115641_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41990063	41990392	.	-	.	ID=comp115641_c0_seq1.mrna1;geneID=comp115641_c0_seq1.path1;Name=comp115641_c0_seq1;Dir=indeterminatecoverage=97.6;identity=100.0;matches=330;mismatches=0;indels=0;unknowns=0;Target=comp115641_c0_seq1 330 1 .;CDS_Target=comp115641_c0_seq1 92 3 .;locus=RLOC_00002469
ChrX	stalkie_big_nohaplotig	exon	41990063	41990392	100	-	.	Parent=comp115641_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	41990301	41990390	.	-	0	Parent=comp115641_c0_seq1.mrna1
ChrX	gffcl	locus	41991692	41997509	.	-	.	ID=RLOC_00002470;geneIDs=FBgn0000307.1.path1;transcripts=FBgn0000307.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	41991692	41997509	.	-	.	ID=FBgn0000307.1.mrna1;geneID=FBgn0000307.1.path1;Name=FBgn0000307.1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=5818;mismatches=0;indels=0;unknowns=0;Target=FBgn0000307.1 5841 24 .;CDS_Target=FBgn0000307.1 5841 25 .;locus=RLOC_00002470
ChrX	stalkie_big_nohaplotig	exon	41991692	41997509	100	-	.	Parent=FBgn0000307.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	41991692	41997508	.	-	0	Parent=FBgn0000307.1.mrna1
ChrX	gffcl	locus	42007309	42008292	.	-	.	ID=RLOC_00002471;geneIDs=comp135812_c0_seq1.path1;transcripts=comp135812_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42007309	42008292	.	-	.	ID=comp135812_c0_seq1.mrna1;geneID=comp135812_c0_seq1.path1;Name=comp135812_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=981;mismatches=3;indels=1;unknowns=0;Target=comp135812_c0_seq1 985 1 .;CDS_Target=comp135812_c0_seq1 123 1 .;locus=RLOC_00002471
ChrX	stalkie_big_nohaplotig	exon	42007309	42008292	99	-	.	Parent=comp135812_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42008170	42008292	.	-	0	Parent=comp135812_c0_seq1.mrna1
ChrX	gffcl	locus	42014565	42015714	.	+	.	ID=RLOC_00002473;geneIDs=comp156617_c1_seq1.path1;transcripts=comp156617_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42014565	42015714	.	+	.	ID=comp156617_c1_seq1.mrna1;geneID=comp156617_c1_seq1.path1;Name=comp156617_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=1135;mismatches=11;indels=18;unknowns=0;Target=comp156617_c1_seq1 1160 1 .;CDS_Target=comp156617_c1_seq1 144 1 .;locus=RLOC_00002473
ChrX	stalkie_big_nohaplotig	exon	42014565	42015714	97	+	.	Parent=comp156617_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42014565	42014708	.	+	0	Parent=comp156617_c1_seq1.mrna1
ChrX	gffcl	locus	42025046	42028069	.	-	.	ID=RLOC_00002474;geneIDs=FBgn0025678.1.path1;transcripts=FBgn0025678.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42025046	42028069	.	-	.	ID=FBgn0025678.1.mrna1;geneID=FBgn0025678.1.path1;Name=FBgn0025678.1;Dir=sensecoverage=100.0;identity=100.0;matches=1302;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002474
ChrX	stalkie_big_nohaplotig	exon	42025046	42025678	100	-	.	Parent=FBgn0025678.1.mrna1;Target=FBgn0025678.1 670 1302 +
ChrX	stalkie_big_nohaplotig	exon	42027335	42027966	100	-	.	Parent=FBgn0025678.1.mrna1;Target=FBgn0025678.1 38 669 +
ChrX	stalkie_big_nohaplotig	exon	42028033	42028069	100	-	.	Parent=FBgn0025678.1.mrna1;Target=FBgn0025678.1 1 37 +
ChrX	stalkie_big_nohaplotig	CDS	42025046	42025678	.	-	0	Parent=FBgn0025678.1.mrna1;Target=FBgn0025678.1 670 1302 +
ChrX	stalkie_big_nohaplotig	CDS	42027335	42027966	.	-	2	Parent=FBgn0025678.1.mrna1;Target=FBgn0025678.1 38 669 +
ChrX	stalkie_big_nohaplotig	CDS	42028033	42028069	.	-	0	Parent=FBgn0025678.1.mrna1;Target=FBgn0025678.1 1 37 +
ChrX	gffcl	locus	42053870	42056946	.	+	.	ID=RLOC_00002475;geneIDs=FBgn0028841.1.path1;transcripts=FBgn0028841.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42053870	42056946	.	+	.	ID=FBgn0028841.1.mrna1;geneID=FBgn0028841.1.path1;Name=FBgn0028841.1;Dir=sensecoverage=100.0;identity=99.9;matches=929;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002475
ChrX	stalkie_big_nohaplotig	exon	42053870	42054282	100	+	.	Parent=FBgn0028841.1.mrna1;Target=FBgn0028841.1 1 413 +
ChrX	stalkie_big_nohaplotig	exon	42056363	42056646	100	+	.	Parent=FBgn0028841.1.mrna1;Target=FBgn0028841.1 414 697 +
ChrX	stalkie_big_nohaplotig	exon	42056714	42056946	99	+	.	Parent=FBgn0028841.1.mrna1;Target=FBgn0028841.1 698 930 +
ChrX	stalkie_big_nohaplotig	CDS	42053870	42054282	.	+	0	Parent=FBgn0028841.1.mrna1;Target=FBgn0028841.1 1 413 +
ChrX	stalkie_big_nohaplotig	CDS	42056363	42056646	.	+	1	Parent=FBgn0028841.1.mrna1;Target=FBgn0028841.1 414 697 +
ChrX	stalkie_big_nohaplotig	CDS	42056714	42056946	.	+	2	Parent=FBgn0028841.1.mrna1;Target=FBgn0028841.1 698 930 +
ChrX	gffcl	locus	42058389	42058980	.	-	.	ID=RLOC_00002476;geneIDs=comp146499_c1_seq1.path1;transcripts=comp146499_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42058389	42058980	.	-	.	ID=comp146499_c1_seq1.mrna1;geneID=comp146499_c1_seq1.path1;Name=comp146499_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=590;mismatches=2;indels=1;unknowns=0;Target=comp146499_c1_seq1 593 1 .;CDS_Target=comp146499_c1_seq1 380 222 .;locus=RLOC_00002476
ChrX	stalkie_big_nohaplotig	exon	42058389	42058980	99	-	.	Parent=comp146499_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42058601	42058759	.	-	0	Parent=comp146499_c1_seq1.mrna1
ChrX	gffcl	locus	42077519	42081689	.	+	.	ID=RLOC_00002477;geneIDs=ORF743.path1;transcripts=ORF743.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42077519	42081689	.	+	.	ID=ORF743.mrna1;geneID=ORF743.path1;Name=ORF743;Dir=sensecoverage=100.0;identity=99.9;matches=1465;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002477
ChrX	stalkie_big_nohaplotig	exon	42077519	42077531	100	+	.	Parent=ORF743.mrna1;Target=ORF743 1 13 +
ChrX	stalkie_big_nohaplotig	exon	42080236	42081689	99	+	.	Parent=ORF743.mrna1;Target=ORF743 14 1467 +
ChrX	stalkie_big_nohaplotig	CDS	42077519	42077531	.	+	0	Parent=ORF743.mrna1;Target=ORF743 1 13 +
ChrX	stalkie_big_nohaplotig	CDS	42080236	42081689	.	+	2	Parent=ORF743.mrna1;Target=ORF743 14 1467 +
ChrX	gffcl	locus	42122993	42124206	.	-	.	ID=RLOC_00002478;geneIDs=comp151065_c0_seq1.path1;transcripts=comp151065_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42122993	42124206	.	-	.	ID=comp151065_c0_seq1.mrna1;geneID=comp151065_c0_seq1.path1;Name=comp151065_c0_seq1;Dir=sensecoverage=99.1;identity=98.5;matches=1151;mismatches=8;indels=10;unknowns=0;Target=comp151065_c0_seq1 193 795 +;locus=RLOC_00002478
ChrX	stalkie_big_nohaplotig	exon	42122993	42123997	98	-	.	Parent=comp151065_c0_seq1.mrna1;Target=comp151065_c0_seq1 158 1172 +
ChrX	stalkie_big_nohaplotig	exon	42124053	42124206	100	-	.	Parent=comp151065_c0_seq1.mrna1;Target=comp151065_c0_seq1 4 157 +
ChrX	stalkie_big_nohaplotig	CDS	42123360	42123962	.	-	0	Parent=comp151065_c0_seq1.mrna1
ChrX	gffcl	locus	42164852	42165406	.	+	.	ID=RLOC_00002479;geneIDs=comp147576_c0_seq1.path1;transcripts=comp147576_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42164852	42165406	.	+	.	ID=comp147576_c0_seq1.mrna1;geneID=comp147576_c0_seq1.path1;Name=comp147576_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=555;mismatches=0;indels=0;unknowns=0;Target=comp147576_c0_seq1 555 1 .;CDS_Target=comp147576_c0_seq1 374 243 .;locus=RLOC_00002479
ChrX	stalkie_big_nohaplotig	exon	42164852	42165406	100	+	.	Parent=comp147576_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42165094	42165225	.	+	0	Parent=comp147576_c0_seq1.mrna1
ChrX	gffcl	locus	42223674	42224457	.	+	.	ID=RLOC_00002480;geneIDs=comp115669_c0_seq1.path1;transcripts=comp115669_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42223674	42224457	.	+	.	ID=comp115669_c0_seq1.mrna1;geneID=comp115669_c0_seq1.path1;Name=comp115669_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.7;matches=782;mismatches=2;indels=0;unknowns=0;Target=comp115669_c0_seq1 784 1 .;CDS_Target=comp115669_c0_seq1 674 51 .;locus=RLOC_00002480
ChrX	stalkie_big_nohaplotig	exon	42223674	42224457	99	+	.	Parent=comp115669_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42223724	42224347	.	+	0	Parent=comp115669_c0_seq1.mrna1
ChrX	gffcl	locus	42346906	42347473	.	+	.	ID=RLOC_00002481;geneIDs=comp150718_c0_seq1.path1;transcripts=comp150718_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42346906	42347473	.	+	.	ID=comp150718_c0_seq1.mrna1;geneID=comp150718_c0_seq1.path1;Name=comp150718_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=556;mismatches=11;indels=3;unknowns=0;Target=comp150718_c0_seq1 569 1 .;CDS_Target=comp150718_c0_seq1 199 134 .;locus=RLOC_00002481
ChrX	stalkie_big_nohaplotig	exon	42346906	42347473	97	+	.	Parent=comp150718_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42347040	42347105	.	+	0	Parent=comp150718_c0_seq1.mrna1
ChrX	gffcl	locus	42398205	42399745	.	+	.	ID=RLOC_00002482;geneIDs=FBgn0020416.2.path1;transcripts=FBgn0020416.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42398205	42399745	.	+	.	ID=FBgn0020416.2.mrna1;geneID=FBgn0020416.2.path1;Name=FBgn0020416.2;Dir=sensecoverage=100.0;identity=99.2;matches=1360;mismatches=11;indels=0;unknowns=0;locus=RLOC_00002482
ChrX	stalkie_big_nohaplotig	exon	42398205	42398361	98	+	.	Parent=FBgn0020416.2.mrna1;Target=FBgn0020416.2 1 157 +
ChrX	stalkie_big_nohaplotig	exon	42398464	42399018	99	+	.	Parent=FBgn0020416.2.mrna1;Target=FBgn0020416.2 158 712 +
ChrX	stalkie_big_nohaplotig	exon	42399087	42399745	99	+	.	Parent=FBgn0020416.2.mrna1;Target=FBgn0020416.2 713 1371 +
ChrX	stalkie_big_nohaplotig	CDS	42398205	42398361	.	+	0	Parent=FBgn0020416.2.mrna1;Target=FBgn0020416.2 1 157 +
ChrX	stalkie_big_nohaplotig	CDS	42398464	42399018	.	+	2	Parent=FBgn0020416.2.mrna1;Target=FBgn0020416.2 158 712 +
ChrX	stalkie_big_nohaplotig	CDS	42399087	42399745	.	+	2	Parent=FBgn0020416.2.mrna1;Target=FBgn0020416.2 713 1371 +
ChrX	gffcl	locus	42404991	42408665	.	+	.	ID=RLOC_00002483;geneIDs=FBgn0020416.1.path1;transcripts=FBgn0020416.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42404991	42408665	.	+	.	ID=FBgn0020416.1.mrna1;geneID=FBgn0020416.1.path1;Name=FBgn0020416.1;Dir=sensecoverage=100.0;identity=99.9;matches=1433;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002483
ChrX	stalkie_big_nohaplotig	exon	42404991	42405222	100	+	.	Parent=FBgn0020416.1.mrna1;Target=FBgn0020416.1 1 232 +
ChrX	stalkie_big_nohaplotig	exon	42405284	42405835	99	+	.	Parent=FBgn0020416.1.mrna1;Target=FBgn0020416.1 233 784 +
ChrX	stalkie_big_nohaplotig	exon	42408016	42408665	100	+	.	Parent=FBgn0020416.1.mrna1;Target=FBgn0020416.1 785 1434 +
ChrX	stalkie_big_nohaplotig	CDS	42404991	42405222	.	+	0	Parent=FBgn0020416.1.mrna1;Target=FBgn0020416.1 1 232 +
ChrX	stalkie_big_nohaplotig	CDS	42405284	42405835	.	+	2	Parent=FBgn0020416.1.mrna1;Target=FBgn0020416.1 233 784 +
ChrX	stalkie_big_nohaplotig	CDS	42408016	42408665	.	+	2	Parent=FBgn0020416.1.mrna1;Target=FBgn0020416.1 785 1434 +
ChrX	gffcl	locus	42409363	42416414	.	.	.	ID=RLOC_00002484;geneIDs=FBgn0020415.1.path1,comp136029_c0_seq1.path1;transcripts=FBgn0020415.1.mrna1,comp136029_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42409363	42416414	.	+	.	ID=FBgn0020415.1.mrna1;geneID=FBgn0020415.1.path1;Name=FBgn0020415.1;Dir=sensecoverage=100.0;identity=99.9;matches=1366;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002484
ChrX	stalkie_big_nohaplotig	exon	42409363	42409516	100	+	.	Parent=FBgn0020415.1.mrna1;Target=FBgn0020415.1 1 154 +
ChrX	stalkie_big_nohaplotig	exon	42415139	42415696	99	+	.	Parent=FBgn0020415.1.mrna1;Target=FBgn0020415.1 155 712 +
ChrX	stalkie_big_nohaplotig	exon	42415759	42416414	99	+	.	Parent=FBgn0020415.1.mrna1;Target=FBgn0020415.1 713 1368 +
ChrX	stalkie_big_nohaplotig	CDS	42409363	42409516	.	+	0	Parent=FBgn0020415.1.mrna1;Target=FBgn0020415.1 1 154 +
ChrX	stalkie_big_nohaplotig	CDS	42415139	42415696	.	+	2	Parent=FBgn0020415.1.mrna1;Target=FBgn0020415.1 155 712 +
ChrX	stalkie_big_nohaplotig	CDS	42415759	42416414	.	+	2	Parent=FBgn0020415.1.mrna1;Target=FBgn0020415.1 713 1368 +
ChrX	stalkie_big_nohaplotig	mRNA	42414413	42415160	.	-	.	ID=comp136029_c0_seq1.mrna1;geneID=comp136029_c0_seq1.path1;Name=comp136029_c0_seq1;Dir=indeterminatecoverage=97.7;identity=100.0;matches=748;mismatches=0;indels=0;unknowns=0;Target=comp136029_c0_seq1 748 1 .;CDS_Target=comp136029_c0_seq1 425 312 .;locus=RLOC_00002484
ChrX	stalkie_big_nohaplotig	exon	42414413	42415160	100	-	.	Parent=comp136029_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42414736	42414849	.	-	0	Parent=comp136029_c0_seq1.mrna1
ChrX	gffcl	locus	42416670	42418966	.	+	.	ID=RLOC_00002485;geneIDs=FBgn0020414.1.path1;transcripts=FBgn0020414.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42416670	42418966	.	+	.	ID=FBgn0020414.1.mrna1;geneID=FBgn0020414.1.path1;Name=FBgn0020414.1;Dir=sensecoverage=100.0;identity=99.8;matches=1338;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002485
ChrX	stalkie_big_nohaplotig	exon	42416670	42416808	99	+	.	Parent=FBgn0020414.1.mrna1;Target=FBgn0020414.1 1 139 +
ChrX	stalkie_big_nohaplotig	exon	42416888	42417439	99	+	.	Parent=FBgn0020414.1.mrna1;Target=FBgn0020414.1 140 691 +
ChrX	stalkie_big_nohaplotig	exon	42418317	42418966	99	+	.	Parent=FBgn0020414.1.mrna1;Target=FBgn0020414.1 692 1341 +
ChrX	stalkie_big_nohaplotig	CDS	42416670	42416808	.	+	0	Parent=FBgn0020414.1.mrna1;Target=FBgn0020414.1 1 139 +
ChrX	stalkie_big_nohaplotig	CDS	42416888	42417439	.	+	2	Parent=FBgn0020414.1.mrna1;Target=FBgn0020414.1 140 691 +
ChrX	stalkie_big_nohaplotig	CDS	42418317	42418966	.	+	2	Parent=FBgn0020414.1.mrna1;Target=FBgn0020414.1 692 1341 +
ChrX	gffcl	locus	42432609	42447010	.	+	.	ID=RLOC_00002486;geneIDs=FBgn0031542.1.path1;transcripts=FBgn0031542.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42432609	42447010	.	+	.	ID=FBgn0031542.1.mrna1;geneID=FBgn0031542.1.path1;Name=FBgn0031542.1;Dir=indeterminatecoverage=94.9;identity=100.0;matches=982;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002486
ChrX	stalkie_big_nohaplotig	exon	42432609	42432618	100	+	.	Parent=FBgn0031542.1.mrna1;Target=FBgn0031542.1 63 54 .
ChrX	stalkie_big_nohaplotig	exon	42439286	42439291	100	+	.	Parent=FBgn0031542.1.mrna1;Target=FBgn0031542.1 69 64 .
ChrX	stalkie_big_nohaplotig	exon	42440462	42440468	100	+	.	Parent=FBgn0031542.1.mrna1;Target=FBgn0031542.1 76 70 .
ChrX	stalkie_big_nohaplotig	exon	42446052	42447010	100	+	.	Parent=FBgn0031542.1.mrna1;Target=FBgn0031542.1 1035 77 .
ChrX	stalkie_big_nohaplotig	CDS	42432610	42432618	.	+	0	Parent=FBgn0031542.1.mrna1;Target=FBgn0031542.1 63 55 .
ChrX	stalkie_big_nohaplotig	CDS	42439286	42439291	.	+	0	Parent=FBgn0031542.1.mrna1;Target=FBgn0031542.1 69 64 .
ChrX	stalkie_big_nohaplotig	CDS	42440462	42440468	.	+	0	Parent=FBgn0031542.1.mrna1;Target=FBgn0031542.1 76 70 .
ChrX	stalkie_big_nohaplotig	CDS	42446052	42447010	.	+	2	Parent=FBgn0031542.1.mrna1;Target=FBgn0031542.1 1035 77 .
ChrX	gffcl	locus	42478888	42479240	.	+	.	ID=RLOC_00002487;geneIDs=comp69100_c0_seq1.path1;transcripts=comp69100_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42478888	42479240	.	+	.	ID=comp69100_c0_seq1.mrna1;geneID=comp69100_c0_seq1.path1;Name=comp69100_c0_seq1;Dir=indeterminatecoverage=96.2;identity=100.0;matches=353;mismatches=0;indels=0;unknowns=0;Target=comp69100_c0_seq1 353 1 .;CDS_Target=comp69100_c0_seq1 90 1 .;locus=RLOC_00002487
ChrX	stalkie_big_nohaplotig	exon	42478888	42479240	100	+	.	Parent=comp69100_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42478888	42478977	.	+	0	Parent=comp69100_c0_seq1.mrna1
ChrX	gffcl	locus	42487066	42540433	.	+	.	ID=RLOC_00002488;geneIDs=FBgn0005677.1.path1;transcripts=FBgn0005677.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42487066	42540433	.	+	.	ID=FBgn0005677.1.mrna1;geneID=FBgn0005677.1.path1;Name=FBgn0005677.1;Dir=sensecoverage=100.0;identity=100.0;matches=2942;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002488
ChrX	stalkie_big_nohaplotig	exon	42487066	42487796	100	+	.	Parent=FBgn0005677.1.mrna1;Target=FBgn0005677.1 1 731 +
ChrX	stalkie_big_nohaplotig	exon	42500775	42500801	100	+	.	Parent=FBgn0005677.1.mrna1;Target=FBgn0005677.1 732 758 +
ChrX	stalkie_big_nohaplotig	exon	42518494	42518651	100	+	.	Parent=FBgn0005677.1.mrna1;Target=FBgn0005677.1 759 916 +
ChrX	stalkie_big_nohaplotig	exon	42528013	42528289	100	+	.	Parent=FBgn0005677.1.mrna1;Target=FBgn0005677.1 917 1193 +
ChrX	stalkie_big_nohaplotig	exon	42528528	42528616	100	+	.	Parent=FBgn0005677.1.mrna1;Target=FBgn0005677.1 1194 1282 +
ChrX	stalkie_big_nohaplotig	exon	42528710	42528946	100	+	.	Parent=FBgn0005677.1.mrna1;Target=FBgn0005677.1 1283 1519 +
ChrX	stalkie_big_nohaplotig	exon	42529189	42529710	99	+	.	Parent=FBgn0005677.1.mrna1;Target=FBgn0005677.1 1520 2041 +
ChrX	stalkie_big_nohaplotig	exon	42529885	42529968	100	+	.	Parent=FBgn0005677.1.mrna1;Target=FBgn0005677.1 2042 2125 +
ChrX	stalkie_big_nohaplotig	exon	42535734	42535958	100	+	.	Parent=FBgn0005677.1.mrna1;Target=FBgn0005677.1 2126 2350 +
ChrX	stalkie_big_nohaplotig	exon	42536317	42536778	100	+	.	Parent=FBgn0005677.1.mrna1;Target=FBgn0005677.1 2351 2812 +
ChrX	stalkie_big_nohaplotig	exon	42540303	42540433	100	+	.	Parent=FBgn0005677.1.mrna1;Target=FBgn0005677.1 2813 2943 +
ChrX	stalkie_big_nohaplotig	CDS	42487066	42487796	.	+	0	Parent=FBgn0005677.1.mrna1;Target=FBgn0005677.1 1 731 +
ChrX	stalkie_big_nohaplotig	CDS	42500775	42500801	.	+	1	Parent=FBgn0005677.1.mrna1;Target=FBgn0005677.1 732 758 +
ChrX	stalkie_big_nohaplotig	CDS	42518494	42518651	.	+	1	Parent=FBgn0005677.1.mrna1;Target=FBgn0005677.1 759 916 +
ChrX	stalkie_big_nohaplotig	CDS	42528013	42528289	.	+	2	Parent=FBgn0005677.1.mrna1;Target=FBgn0005677.1 917 1193 +
ChrX	stalkie_big_nohaplotig	CDS	42528528	42528616	.	+	1	Parent=FBgn0005677.1.mrna1;Target=FBgn0005677.1 1194 1282 +
ChrX	stalkie_big_nohaplotig	CDS	42528710	42528946	.	+	2	Parent=FBgn0005677.1.mrna1;Target=FBgn0005677.1 1283 1519 +
ChrX	stalkie_big_nohaplotig	CDS	42529189	42529710	.	+	2	Parent=FBgn0005677.1.mrna1;Target=FBgn0005677.1 1520 2041 +
ChrX	stalkie_big_nohaplotig	CDS	42529885	42529968	.	+	2	Parent=FBgn0005677.1.mrna1;Target=FBgn0005677.1 2042 2125 +
ChrX	stalkie_big_nohaplotig	CDS	42535734	42535958	.	+	2	Parent=FBgn0005677.1.mrna1;Target=FBgn0005677.1 2126 2350 +
ChrX	stalkie_big_nohaplotig	CDS	42536317	42536778	.	+	2	Parent=FBgn0005677.1.mrna1;Target=FBgn0005677.1 2351 2812 +
ChrX	stalkie_big_nohaplotig	CDS	42540303	42540433	.	+	2	Parent=FBgn0005677.1.mrna1;Target=FBgn0005677.1 2813 2943 +
ChrX	gffcl	locus	42536867	42537921	.	+	.	ID=RLOC_00002489;geneIDs=comp952317_c0_seq1.path1;transcripts=comp952317_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42536867	42537921	.	+	.	ID=comp952317_c0_seq1.mrna1;geneID=comp952317_c0_seq1.path1;Name=comp952317_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1041;mismatches=5;indels=9;unknowns=0;Target=comp952317_c0_seq1 1046 1 .;CDS_Target=comp952317_c0_seq1 573 490 .;locus=RLOC_00002489
ChrX	stalkie_big_nohaplotig	exon	42536867	42537921	98	+	.	Parent=comp952317_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42537356	42537439	.	+	0	Parent=comp952317_c0_seq1.mrna1
ChrX	gffcl	locus	42538659	42539158	.	+	.	ID=RLOC_00002490;geneIDs=comp143760_c0_seq1.path1;transcripts=comp143760_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42538659	42539158	.	+	.	ID=comp143760_c0_seq1.mrna1;geneID=comp143760_c0_seq1.path1;Name=comp143760_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.4;matches=497;mismatches=3;indels=0;unknowns=0;Target=comp143760_c0_seq1 501 2 .;CDS_Target=comp143760_c0_seq1 318 262 .;locus=RLOC_00002490
ChrX	stalkie_big_nohaplotig	exon	42538659	42539158	99	+	.	Parent=comp143760_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42538919	42538975	.	+	0	Parent=comp143760_c0_seq1.mrna1
ChrX	gffcl	locus	42541426	42541684	.	+	.	ID=RLOC_00002491;geneIDs=comp94482_c0_seq1.path1;transcripts=comp94482_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42541426	42541684	.	+	.	ID=comp94482_c0_seq1.mrna1;geneID=comp94482_c0_seq1.path1;Name=comp94482_c0_seq1;Dir=indeterminatecoverage=89.9;identity=99.6;matches=258;mismatches=1;indels=0;unknowns=0;Target=comp94482_c0_seq1 288 30 .;CDS_Target=comp94482_c0_seq1 231 157 .;locus=RLOC_00002491
ChrX	stalkie_big_nohaplotig	exon	42541426	42541684	99	+	.	Parent=comp94482_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42541553	42541627	.	+	0	Parent=comp94482_c0_seq1.mrna1
ChrX	gffcl	locus	42592727	42593474	.	+	.	ID=RLOC_00002492;geneIDs=FBgn0034654.3.path1;transcripts=FBgn0034654.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42592727	42593474	.	+	.	ID=FBgn0034654.3.mrna1;geneID=FBgn0034654.3.path1;Name=FBgn0034654.3;Dir=sensecoverage=100.0;identity=99.5;matches=630;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002492
ChrX	stalkie_big_nohaplotig	exon	42592727	42592797	100	+	.	Parent=FBgn0034654.3.mrna1;Target=FBgn0034654.3 1 71 +
ChrX	stalkie_big_nohaplotig	exon	42592856	42593292	99	+	.	Parent=FBgn0034654.3.mrna1;Target=FBgn0034654.3 72 508 +
ChrX	stalkie_big_nohaplotig	exon	42593350	42593474	99	+	.	Parent=FBgn0034654.3.mrna1;Target=FBgn0034654.3 509 633 +
ChrX	stalkie_big_nohaplotig	CDS	42592727	42592797	.	+	0	Parent=FBgn0034654.3.mrna1;Target=FBgn0034654.3 1 71 +
ChrX	stalkie_big_nohaplotig	CDS	42592856	42593292	.	+	1	Parent=FBgn0034654.3.mrna1;Target=FBgn0034654.3 72 508 +
ChrX	stalkie_big_nohaplotig	CDS	42593350	42593474	.	+	2	Parent=FBgn0034654.3.mrna1;Target=FBgn0034654.3 509 633 +
ChrX	gffcl	locus	42673993	42674308	.	+	.	ID=RLOC_00002494;geneIDs=comp1634799_c0_seq1.path1;transcripts=comp1634799_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42673993	42674308	.	+	.	ID=comp1634799_c0_seq1.mrna1;geneID=comp1634799_c0_seq1.path1;Name=comp1634799_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=316;mismatches=0;indels=0;unknowns=0;Target=comp1634799_c0_seq1 316 1 .;CDS_Target=comp1634799_c0_seq1 288 211 .;locus=RLOC_00002494
ChrX	stalkie_big_nohaplotig	exon	42673993	42674308	100	+	.	Parent=comp1634799_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42674203	42674280	.	+	0	Parent=comp1634799_c0_seq1.mrna1
ChrX	gffcl	locus	42719869	42724692	.	-	.	ID=RLOC_00002495;geneIDs=FBgn0053123.1.path1;transcripts=FBgn0053123.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42719869	42724692	.	-	.	ID=FBgn0053123.1.mrna1;geneID=FBgn0053123.1.path1;Name=FBgn0053123.1;Dir=sensecoverage=99.9;identity=100.0;matches=3544;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002495
ChrX	stalkie_big_nohaplotig	exon	42719869	42720071	100	-	.	Parent=FBgn0053123.1.mrna1;Target=FBgn0053123.1 3344 3546 +
ChrX	stalkie_big_nohaplotig	exon	42720140	42720371	100	-	.	Parent=FBgn0053123.1.mrna1;Target=FBgn0053123.1 3112 3343 +
ChrX	stalkie_big_nohaplotig	exon	42721341	42722581	100	-	.	Parent=FBgn0053123.1.mrna1;Target=FBgn0053123.1 1871 3111 +
ChrX	stalkie_big_nohaplotig	exon	42722643	42723101	100	-	.	Parent=FBgn0053123.1.mrna1;Target=FBgn0053123.1 1412 1870 +
ChrX	stalkie_big_nohaplotig	exon	42723168	42723739	100	-	.	Parent=FBgn0053123.1.mrna1;Target=FBgn0053123.1 840 1411 +
ChrX	stalkie_big_nohaplotig	exon	42723797	42724038	100	-	.	Parent=FBgn0053123.1.mrna1;Target=FBgn0053123.1 598 839 +
ChrX	stalkie_big_nohaplotig	exon	42724098	42724692	100	-	.	Parent=FBgn0053123.1.mrna1;Target=FBgn0053123.1 3 597 +
ChrX	stalkie_big_nohaplotig	CDS	42719869	42720071	.	-	2	Parent=FBgn0053123.1.mrna1;Target=FBgn0053123.1 3344 3546 +
ChrX	stalkie_big_nohaplotig	CDS	42720140	42720371	.	-	0	Parent=FBgn0053123.1.mrna1;Target=FBgn0053123.1 3112 3343 +
ChrX	stalkie_big_nohaplotig	CDS	42721341	42722581	.	-	2	Parent=FBgn0053123.1.mrna1;Target=FBgn0053123.1 1871 3111 +
ChrX	stalkie_big_nohaplotig	CDS	42722643	42723101	.	-	2	Parent=FBgn0053123.1.mrna1;Target=FBgn0053123.1 1412 1870 +
ChrX	stalkie_big_nohaplotig	CDS	42723168	42723739	.	-	1	Parent=FBgn0053123.1.mrna1;Target=FBgn0053123.1 840 1411 +
ChrX	stalkie_big_nohaplotig	CDS	42723797	42724038	.	-	0	Parent=FBgn0053123.1.mrna1;Target=FBgn0053123.1 598 839 +
ChrX	stalkie_big_nohaplotig	CDS	42724098	42724691	.	-	0	Parent=FBgn0053123.1.mrna1;Target=FBgn0053123.1 4 597 +
ChrX	gffcl	locus	42727619	42736640	.	+	.	ID=RLOC_00002496;geneIDs=FBgn0031601.1.path1,comp157249_c0_seq1.path1;transcripts=comp157249_c0_seq1.mrna1,FBgn0031601.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42727619	42736640	.	+	.	ID=comp157249_c0_seq1.mrna1;geneID=comp157249_c0_seq1.path1;Name=comp157249_c0_seq1;Dir=sensecoverage=100.0;identity=98.8;matches=1374;mismatches=10;indels=6;unknowns=0;locus=RLOC_00002496
ChrX	stalkie_big_nohaplotig	exon	42727619	42728132	100	+	.	Parent=comp157249_c0_seq1.mrna1;Target=comp157249_c0_seq1 1 514 +
ChrX	stalkie_big_nohaplotig	exon	42728192	42728229	100	+	.	Parent=comp157249_c0_seq1.mrna1;Target=comp157249_c0_seq1 515 552 +
ChrX	stalkie_big_nohaplotig	exon	42730887	42731268	100	+	.	Parent=comp157249_c0_seq1.mrna1;Target=comp157249_c0_seq1 553 934 +
ChrX	stalkie_big_nohaplotig	exon	42731336	42731607	98	+	.	Parent=comp157249_c0_seq1.mrna1;Target=comp157249_c0_seq1 935 1205 +
ChrX	stalkie_big_nohaplotig	exon	42736457	42736640	93	+	.	Parent=comp157249_c0_seq1.mrna1;Target=comp157249_c0_seq1 1206 1384 +
ChrX	stalkie_big_nohaplotig	CDS	42728055	42728132	.	+	0	Parent=comp157249_c0_seq1.mrna1;Target=comp157249_c0_seq1 437 514 +
ChrX	stalkie_big_nohaplotig	CDS	42728192	42728229	.	+	0	Parent=comp157249_c0_seq1.mrna1;Target=comp157249_c0_seq1 515 552 +
ChrX	stalkie_big_nohaplotig	CDS	42730887	42731199	.	+	1	Parent=comp157249_c0_seq1.mrna1;Target=comp157249_c0_seq1 553 865 +
ChrX	stalkie_big_nohaplotig	mRNA	42728040	42728532	.	+	.	ID=FBgn0031601.1.mrna1;geneID=FBgn0031601.1.path1;Name=FBgn0031601.1;Dir=sensecoverage=98.4;identity=94.9;matches=412;mismatches=22;indels=0;unknowns=0;locus=RLOC_00002496
ChrX	stalkie_big_nohaplotig	exon	42728040	42728132	100	+	.	Parent=FBgn0031601.1.mrna1;Target=FBgn0031601.1 1 93 +
ChrX	stalkie_big_nohaplotig	exon	42728192	42728532	93	+	.	Parent=FBgn0031601.1.mrna1;Target=FBgn0031601.1 94 434 +
ChrX	stalkie_big_nohaplotig	CDS	42728040	42728132	.	+	0	Parent=FBgn0031601.1.mrna1;Target=FBgn0031601.1 1 93 +
ChrX	stalkie_big_nohaplotig	CDS	42728192	42728530	.	+	0	Parent=FBgn0031601.1.mrna1;Target=FBgn0031601.1 94 432 +
ChrX	gffcl	locus	42738360	42741062	.	-	.	ID=RLOC_00002497;geneIDs=comp152799_c0_seq1.path1;transcripts=comp152799_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42738360	42741062	.	-	.	ID=comp152799_c0_seq1.mrna1;geneID=comp152799_c0_seq1.path1;Name=comp152799_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.7;matches=1541;mismatches=5;indels=0;unknowns=0;locus=RLOC_00002497
ChrX	stalkie_big_nohaplotig	exon	42738360	42738545	100	-	.	Parent=comp152799_c0_seq1.mrna1;Target=comp152799_c0_seq1 1549 1364 .
ChrX	stalkie_big_nohaplotig	exon	42738628	42738722	100	-	.	Parent=comp152799_c0_seq1.mrna1;Target=comp152799_c0_seq1 1363 1269 .
ChrX	stalkie_big_nohaplotig	exon	42739155	42739326	98	-	.	Parent=comp152799_c0_seq1.mrna1;Target=comp152799_c0_seq1 1268 1097 .
ChrX	stalkie_big_nohaplotig	exon	42739381	42739492	98	-	.	Parent=comp152799_c0_seq1.mrna1;Target=comp152799_c0_seq1 1096 985 .
ChrX	stalkie_big_nohaplotig	exon	42739645	42739803	100	-	.	Parent=comp152799_c0_seq1.mrna1;Target=comp152799_c0_seq1 984 826 .
ChrX	stalkie_big_nohaplotig	exon	42739862	42740152	100	-	.	Parent=comp152799_c0_seq1.mrna1;Target=comp152799_c0_seq1 825 535 .
ChrX	stalkie_big_nohaplotig	exon	42740217	42740302	100	-	.	Parent=comp152799_c0_seq1.mrna1;Target=comp152799_c0_seq1 534 449 .
ChrX	stalkie_big_nohaplotig	exon	42740618	42741062	100	-	.	Parent=comp152799_c0_seq1.mrna1;Target=comp152799_c0_seq1 448 4 .
ChrX	stalkie_big_nohaplotig	CDS	42739156	42739326	.	-	0	Parent=comp152799_c0_seq1.mrna1;Target=comp152799_c0_seq1 1267 1097 .
ChrX	stalkie_big_nohaplotig	CDS	42739381	42739492	.	-	1	Parent=comp152799_c0_seq1.mrna1;Target=comp152799_c0_seq1 1096 985 .
ChrX	stalkie_big_nohaplotig	CDS	42739645	42739706	.	-	0	Parent=comp152799_c0_seq1.mrna1;Target=comp152799_c0_seq1 984 923 .
ChrX	gffcl	locus	42739184	42749146	.	+	.	ID=RLOC_00002498;geneIDs=FBgn0015829.1.path1,FBgn0015829.2.path1;transcripts=FBgn0015829.2.mrna1,FBgn0015829.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42739184	42749146	.	+	.	ID=FBgn0015829.2.mrna1;geneID=FBgn0015829.2.path1;Name=FBgn0015829.2;Dir=sensecoverage=100.0;identity=99.4;matches=975;mismatches=6;indels=0;unknowns=0;locus=RLOC_00002498
ChrX	stalkie_big_nohaplotig	exon	42739184	42739326	100	+	.	Parent=FBgn0015829.2.mrna1;Target=FBgn0015829.2 1 143 +
ChrX	stalkie_big_nohaplotig	exon	42739381	42739488	100	+	.	Parent=FBgn0015829.2.mrna1;Target=FBgn0015829.2 144 251 +
ChrX	stalkie_big_nohaplotig	exon	42739641	42739704	100	+	.	Parent=FBgn0015829.2.mrna1;Target=FBgn0015829.2 252 315 +
ChrX	stalkie_big_nohaplotig	exon	42747878	42747976	100	+	.	Parent=FBgn0015829.2.mrna1;Target=FBgn0015829.2 316 414 +
ChrX	stalkie_big_nohaplotig	exon	42748034	42748324	98	+	.	Parent=FBgn0015829.2.mrna1;Target=FBgn0015829.2 415 705 +
ChrX	stalkie_big_nohaplotig	exon	42748384	42748471	100	+	.	Parent=FBgn0015829.2.mrna1;Target=FBgn0015829.2 706 793 +
ChrX	stalkie_big_nohaplotig	exon	42748959	42749146	98	+	.	Parent=FBgn0015829.2.mrna1;Target=FBgn0015829.2 794 981 +
ChrX	stalkie_big_nohaplotig	CDS	42739184	42739326	.	+	0	Parent=FBgn0015829.2.mrna1;Target=FBgn0015829.2 1 143 +
ChrX	stalkie_big_nohaplotig	CDS	42739381	42739488	.	+	1	Parent=FBgn0015829.2.mrna1;Target=FBgn0015829.2 144 251 +
ChrX	stalkie_big_nohaplotig	CDS	42739641	42739704	.	+	1	Parent=FBgn0015829.2.mrna1;Target=FBgn0015829.2 252 315 +
ChrX	stalkie_big_nohaplotig	CDS	42747878	42747976	.	+	0	Parent=FBgn0015829.2.mrna1;Target=FBgn0015829.2 316 414 +
ChrX	stalkie_big_nohaplotig	CDS	42748034	42748324	.	+	0	Parent=FBgn0015829.2.mrna1;Target=FBgn0015829.2 415 705 +
ChrX	stalkie_big_nohaplotig	CDS	42748384	42748471	.	+	0	Parent=FBgn0015829.2.mrna1;Target=FBgn0015829.2 706 793 +
ChrX	stalkie_big_nohaplotig	CDS	42748959	42749146	.	+	2	Parent=FBgn0015829.2.mrna1;Target=FBgn0015829.2 794 981 +
ChrX	stalkie_big_nohaplotig	mRNA	42739235	42740786	.	+	.	ID=FBgn0015829.1.mrna1;geneID=FBgn0015829.1.path1;Name=FBgn0015829.1;Dir=sensecoverage=100.0;identity=99.9;matches=908;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002498
ChrX	stalkie_big_nohaplotig	exon	42739235	42739326	98	+	.	Parent=FBgn0015829.1.mrna1;Target=FBgn0015829.1 1 92 +
ChrX	stalkie_big_nohaplotig	exon	42739381	42739488	100	+	.	Parent=FBgn0015829.1.mrna1;Target=FBgn0015829.1 93 200 +
ChrX	stalkie_big_nohaplotig	exon	42739641	42739803	100	+	.	Parent=FBgn0015829.1.mrna1;Target=FBgn0015829.1 201 363 +
ChrX	stalkie_big_nohaplotig	exon	42739862	42740152	100	+	.	Parent=FBgn0015829.1.mrna1;Target=FBgn0015829.1 364 654 +
ChrX	stalkie_big_nohaplotig	exon	42740217	42740304	100	+	.	Parent=FBgn0015829.1.mrna1;Target=FBgn0015829.1 655 742 +
ChrX	stalkie_big_nohaplotig	exon	42740620	42740786	100	+	.	Parent=FBgn0015829.1.mrna1;Target=FBgn0015829.1 743 909 +
ChrX	stalkie_big_nohaplotig	CDS	42739235	42739326	.	+	0	Parent=FBgn0015829.1.mrna1;Target=FBgn0015829.1 1 92 +
ChrX	stalkie_big_nohaplotig	CDS	42739381	42739488	.	+	1	Parent=FBgn0015829.1.mrna1;Target=FBgn0015829.1 93 200 +
ChrX	stalkie_big_nohaplotig	CDS	42739641	42739803	.	+	1	Parent=FBgn0015829.1.mrna1;Target=FBgn0015829.1 201 363 +
ChrX	stalkie_big_nohaplotig	CDS	42739862	42740152	.	+	0	Parent=FBgn0015829.1.mrna1;Target=FBgn0015829.1 364 654 +
ChrX	stalkie_big_nohaplotig	CDS	42740217	42740304	.	+	0	Parent=FBgn0015829.1.mrna1;Target=FBgn0015829.1 655 742 +
ChrX	stalkie_big_nohaplotig	CDS	42740620	42740786	.	+	2	Parent=FBgn0015829.1.mrna1;Target=FBgn0015829.1 743 909 +
ChrX	gffcl	locus	42741287	42742255	.	-	.	ID=RLOC_00002499;geneIDs=comp155710_c0_seq1.path1;transcripts=comp155710_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42741287	42742255	.	-	.	ID=comp155710_c0_seq1.mrna1;geneID=comp155710_c0_seq1.path1;Name=comp155710_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=956;mismatches=13;indels=5;unknowns=0;Target=comp155710_c0_seq1 974 1 .;CDS_Target=comp155710_c0_seq1 874 800 .;locus=RLOC_00002499
ChrX	stalkie_big_nohaplotig	exon	42741287	42742255	98	-	.	Parent=comp155710_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42741382	42741456	.	-	0	Parent=comp155710_c0_seq1.mrna1
ChrX	gffcl	locus	42808603	42809740	.	+	.	ID=RLOC_00002500;geneIDs=comp159302_c2_seq1.path2;transcripts=comp159302_c2_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	42808603	42809740	.	+	.	ID=comp159302_c2_seq1.mrna2;geneID=comp159302_c2_seq1.path2;Name=comp159302_c2_seq1;Dir=indeterminatecoverage=28.5;identity=98.9;matches=1126;mismatches=12;indels=0;unknowns=0;Target=comp159302_c2_seq1 3986 2849 .;locus=RLOC_00002500
ChrX	stalkie_big_nohaplotig	exon	42808603	42809740	98	+	.	Parent=comp159302_c2_seq1.mrna2
ChrX	gffcl	locus	42810455	42813305	.	+	.	ID=RLOC_00002501;geneIDs=comp159302_c2_seq1.path1;transcripts=comp159302_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42810455	42813305	.	+	.	ID=comp159302_c2_seq1.mrna1;geneID=comp159302_c2_seq1.path1;Name=comp159302_c2_seq1;Dir=indeterminatecoverage=71.5;identity=93.9;matches=2679;mismatches=168;indels=5;unknowns=0;Target=comp159302_c2_seq1 2848 1 .;CDS_Target=comp159302_c2_seq1 379 44 .;locus=RLOC_00002501
ChrX	stalkie_big_nohaplotig	exon	42810455	42813305	93	+	.	Parent=comp159302_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42810498	42810833	.	+	0	Parent=comp159302_c2_seq1.mrna1
ChrX	gffcl	locus	42876890	42879166	.	+	.	ID=RLOC_00002502;geneIDs=FBgn0031602.1.path1;transcripts=FBgn0031602.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42876890	42879166	.	+	.	ID=FBgn0031602.1.mrna1;geneID=FBgn0031602.1.path1;Name=FBgn0031602.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2277;mismatches=0;indels=0;unknowns=0;Target=FBgn0031602.1 2277 1 .;locus=RLOC_00002502
ChrX	stalkie_big_nohaplotig	exon	42876890	42879166	100	+	.	Parent=FBgn0031602.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42876890	42879166	.	+	0	Parent=FBgn0031602.1.mrna1
ChrX	gffcl	locus	42881997	42882701	.	+	.	ID=RLOC_00002503;geneIDs=comp144220_c0_seq1.path1;transcripts=comp144220_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42881997	42882701	.	+	.	ID=comp144220_c0_seq1.mrna1;geneID=comp144220_c0_seq1.path1;Name=comp144220_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=702;mismatches=3;indels=0;unknowns=0;Target=comp144220_c0_seq1 705 1 .;CDS_Target=comp144220_c0_seq1 406 212 .;locus=RLOC_00002503
ChrX	stalkie_big_nohaplotig	exon	42881997	42882701	99	+	.	Parent=comp144220_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42882208	42882402	.	+	0	Parent=comp144220_c0_seq1.mrna1
ChrX	gffcl	locus	42882741	42883714	.	+	.	ID=RLOC_00002504;geneIDs=comp161797_c1_seq1.path1;transcripts=comp161797_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42882741	42883714	.	+	.	ID=comp161797_c1_seq1.mrna1;geneID=comp161797_c1_seq1.path1;Name=comp161797_c1_seq1;Dir=indeterminatecoverage=99.4;identity=98.8;matches=963;mismatches=11;indels=1;unknowns=0;Target=comp161797_c1_seq1 981 7 .;CDS_Target=comp161797_c1_seq1 263 186 .;locus=RLOC_00002504
ChrX	stalkie_big_nohaplotig	exon	42882741	42883714	98	+	.	Parent=comp161797_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42882920	42882996	.	+	0	Parent=comp161797_c1_seq1.mrna1
ChrX	gffcl	locus	42884587	42885246	.	+	.	ID=RLOC_00002505;geneIDs=comp151256_c0_seq1.path1;transcripts=comp151256_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42884587	42885246	.	+	.	ID=comp151256_c0_seq1.mrna1;geneID=comp151256_c0_seq1.path1;Name=comp151256_c0_seq1;Dir=indeterminatecoverage=99.5;identity=98.6;matches=653;mismatches=7;indels=2;unknowns=0;Target=comp151256_c0_seq1 665 4 .;CDS_Target=comp151256_c0_seq1 291 181 .;locus=RLOC_00002505
ChrX	stalkie_big_nohaplotig	exon	42884587	42885246	98	+	.	Parent=comp151256_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42884764	42884874	.	+	0	Parent=comp151256_c0_seq1.mrna1
ChrX	gffcl	locus	42885635	42885851	.	+	.	ID=RLOC_00002506;geneIDs=comp1297102_c0_seq1.path1;transcripts=comp1297102_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42885635	42885851	.	+	.	ID=comp1297102_c0_seq1.mrna1;geneID=comp1297102_c0_seq1.path1;Name=comp1297102_c0_seq1;Dir=indeterminatecoverage=97.7;identity=100.0;matches=217;mismatches=0;indels=0;unknowns=0;Target=comp1297102_c0_seq1 217 1 .;CDS_Target=comp1297102_c0_seq1 55 2 .;locus=RLOC_00002506
ChrX	stalkie_big_nohaplotig	exon	42885635	42885851	100	+	.	Parent=comp1297102_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42885636	42885689	.	+	0	Parent=comp1297102_c0_seq1.mrna1
ChrX	gffcl	locus	42892209	42895801	.	-	.	ID=RLOC_00002507;geneIDs=FBgn0027609.1.path1;transcripts=FBgn0027609.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42892209	42895801	.	-	.	ID=FBgn0027609.1.mrna1;geneID=FBgn0027609.1.path1;Name=FBgn0027609.1;Dir=sensecoverage=100.0;identity=100.0;matches=1347;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002507
ChrX	stalkie_big_nohaplotig	exon	42892209	42892322	100	-	.	Parent=FBgn0027609.1.mrna1;Target=FBgn0027609.1 1234 1347 +
ChrX	stalkie_big_nohaplotig	exon	42894446	42894617	100	-	.	Parent=FBgn0027609.1.mrna1;Target=FBgn0027609.1 1062 1233 +
ChrX	stalkie_big_nohaplotig	exon	42894678	42895576	100	-	.	Parent=FBgn0027609.1.mrna1;Target=FBgn0027609.1 163 1061 +
ChrX	stalkie_big_nohaplotig	exon	42895640	42895801	100	-	.	Parent=FBgn0027609.1.mrna1;Target=FBgn0027609.1 1 162 +
ChrX	stalkie_big_nohaplotig	CDS	42892209	42892322	.	-	0	Parent=FBgn0027609.1.mrna1;Target=FBgn0027609.1 1234 1347 +
ChrX	stalkie_big_nohaplotig	CDS	42894446	42894617	.	-	1	Parent=FBgn0027609.1.mrna1;Target=FBgn0027609.1 1062 1233 +
ChrX	stalkie_big_nohaplotig	CDS	42894678	42895576	.	-	0	Parent=FBgn0027609.1.mrna1;Target=FBgn0027609.1 163 1061 +
ChrX	stalkie_big_nohaplotig	CDS	42895640	42895801	.	-	0	Parent=FBgn0027609.1.mrna1;Target=FBgn0027609.1 1 162 +
ChrX	gffcl	locus	42897977	42899919	.	+	.	ID=RLOC_00002509;geneIDs=FBgn0031604.1.path1;transcripts=FBgn0031604.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42897977	42899919	.	+	.	ID=FBgn0031604.1.mrna1;geneID=FBgn0031604.1.path1;Name=FBgn0031604.1;Dir=sensecoverage=100.0;identity=100.0;matches=1653;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002509
ChrX	stalkie_big_nohaplotig	exon	42897977	42898007	100	+	.	Parent=FBgn0031604.1.mrna1;Target=FBgn0031604.1 1 31 +
ChrX	stalkie_big_nohaplotig	exon	42898069	42898310	100	+	.	Parent=FBgn0031604.1.mrna1;Target=FBgn0031604.1 32 273 +
ChrX	stalkie_big_nohaplotig	exon	42898366	42899013	100	+	.	Parent=FBgn0031604.1.mrna1;Target=FBgn0031604.1 274 921 +
ChrX	stalkie_big_nohaplotig	exon	42899071	42899288	100	+	.	Parent=FBgn0031604.1.mrna1;Target=FBgn0031604.1 922 1139 +
ChrX	stalkie_big_nohaplotig	exon	42899352	42899712	100	+	.	Parent=FBgn0031604.1.mrna1;Target=FBgn0031604.1 1140 1500 +
ChrX	stalkie_big_nohaplotig	exon	42899767	42899919	100	+	.	Parent=FBgn0031604.1.mrna1;Target=FBgn0031604.1 1501 1653 +
ChrX	stalkie_big_nohaplotig	CDS	42897977	42898007	.	+	0	Parent=FBgn0031604.1.mrna1;Target=FBgn0031604.1 1 31 +
ChrX	stalkie_big_nohaplotig	CDS	42898069	42898310	.	+	2	Parent=FBgn0031604.1.mrna1;Target=FBgn0031604.1 32 273 +
ChrX	stalkie_big_nohaplotig	CDS	42898366	42899013	.	+	0	Parent=FBgn0031604.1.mrna1;Target=FBgn0031604.1 274 921 +
ChrX	stalkie_big_nohaplotig	CDS	42899071	42899288	.	+	0	Parent=FBgn0031604.1.mrna1;Target=FBgn0031604.1 922 1139 +
ChrX	stalkie_big_nohaplotig	CDS	42899352	42899712	.	+	1	Parent=FBgn0031604.1.mrna1;Target=FBgn0031604.1 1140 1500 +
ChrX	stalkie_big_nohaplotig	CDS	42899767	42899919	.	+	0	Parent=FBgn0031604.1.mrna1;Target=FBgn0031604.1 1501 1653 +
ChrX	gffcl	locus	42909573	42923343	.	+	.	ID=RLOC_00002510;geneIDs=comp154523_c0_seq1.path1;transcripts=comp154523_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42909573	42923343	.	+	.	ID=comp154523_c0_seq1.mrna1;geneID=comp154523_c0_seq1.path1;Name=comp154523_c0_seq1;Dir=indeterminatecoverage=91.2;identity=97.8;matches=782;mismatches=1;indels=17;unknowns=0;locus=RLOC_00002510
ChrX	stalkie_big_nohaplotig	exon	42909573	42909581	39	+	.	Parent=comp154523_c0_seq1.mrna1;Target=comp154523_c0_seq1 100 78 .
ChrX	stalkie_big_nohaplotig	exon	42912259	42912264	100	+	.	Parent=comp154523_c0_seq1.mrna1;Target=comp154523_c0_seq1 106 101 .
ChrX	stalkie_big_nohaplotig	exon	42916517	42916518	100	+	.	Parent=comp154523_c0_seq1.mrna1;Target=comp154523_c0_seq1 108 107 .
ChrX	stalkie_big_nohaplotig	exon	42922578	42923343	99	+	.	Parent=comp154523_c0_seq1.mrna1;Target=comp154523_c0_seq1 877 109 .
ChrX	stalkie_big_nohaplotig	CDS	42909573	42909581	.	+	0	Parent=comp154523_c0_seq1.mrna1;Target=comp154523_c0_seq1 100 78 .
ChrX	stalkie_big_nohaplotig	CDS	42912259	42912264	.	+	0	Parent=comp154523_c0_seq1.mrna1;Target=comp154523_c0_seq1 106 101 .
ChrX	stalkie_big_nohaplotig	CDS	42916517	42916518	.	+	0	Parent=comp154523_c0_seq1.mrna1;Target=comp154523_c0_seq1 108 107 .
ChrX	stalkie_big_nohaplotig	CDS	42922578	42922618	.	+	1	Parent=comp154523_c0_seq1.mrna1;Target=comp154523_c0_seq1 149 109 .
ChrX	gffcl	locus	42912073	42912555	.	+	.	ID=RLOC_00002511;geneIDs=FBgn0040705.1.path1;transcripts=FBgn0040705.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42912073	42912555	.	+	.	ID=FBgn0040705.1.mrna1;geneID=FBgn0040705.1.path1;Name=FBgn0040705.1;Dir=sensecoverage=100.0;identity=100.0;matches=303;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002511
ChrX	stalkie_big_nohaplotig	exon	42912073	42912188	100	+	.	Parent=FBgn0040705.1.mrna1;Target=FBgn0040705.1 1 116 +
ChrX	stalkie_big_nohaplotig	exon	42912294	42912400	100	+	.	Parent=FBgn0040705.1.mrna1;Target=FBgn0040705.1 117 223 +
ChrX	stalkie_big_nohaplotig	exon	42912476	42912555	100	+	.	Parent=FBgn0040705.1.mrna1;Target=FBgn0040705.1 224 303 +
ChrX	stalkie_big_nohaplotig	CDS	42912073	42912188	.	+	0	Parent=FBgn0040705.1.mrna1;Target=FBgn0040705.1 1 116 +
ChrX	stalkie_big_nohaplotig	CDS	42912294	42912400	.	+	1	Parent=FBgn0040705.1.mrna1;Target=FBgn0040705.1 117 223 +
ChrX	stalkie_big_nohaplotig	CDS	42912476	42912555	.	+	2	Parent=FBgn0040705.1.mrna1;Target=FBgn0040705.1 224 303 +
ChrX	stalkie_big_nohaplotig	mRNA	42914992	42916299	.	-	.	ID=comp145938_c0_seq1.mrna1;geneID=comp145938_c0_seq1.path1;Name=comp145938_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=1303;mismatches=5;indels=14;unknowns=0;Target=comp145938_c0_seq1 1322 1 .;CDS_Target=comp145938_c0_seq1 1050 859 .;locus=RLOC_00002512
ChrX	stalkie_big_nohaplotig	exon	42914992	42916299	98	-	.	Parent=comp145938_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42915264	42915455	.	-	0	Parent=comp145938_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42916581	42924430	.	-	.	ID=FBgn0019982.1.mrna1;geneID=FBgn0019982.1.path1;Name=FBgn0019982.1;Dir=sensecoverage=100.0;identity=100.0;matches=741;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002512
ChrX	stalkie_big_nohaplotig	exon	42916581	42916993	100	-	.	Parent=FBgn0019982.1.mrna1;Target=FBgn0019982.1 329 741 +
ChrX	stalkie_big_nohaplotig	exon	42921880	42922098	100	-	.	Parent=FBgn0019982.1.mrna1;Target=FBgn0019982.1 110 328 +
ChrX	stalkie_big_nohaplotig	exon	42924322	42924430	100	-	.	Parent=FBgn0019982.1.mrna1;Target=FBgn0019982.1 1 109 +
ChrX	stalkie_big_nohaplotig	CDS	42916581	42916993	.	-	2	Parent=FBgn0019982.1.mrna1;Target=FBgn0019982.1 329 741 +
ChrX	stalkie_big_nohaplotig	CDS	42921880	42922098	.	-	2	Parent=FBgn0019982.1.mrna1;Target=FBgn0019982.1 110 328 +
ChrX	stalkie_big_nohaplotig	CDS	42924322	42924430	.	-	0	Parent=FBgn0019982.1.mrna1;Target=FBgn0019982.1 1 109 +
ChrX	gffcl	locus	42917267	42917935	.	+	.	ID=RLOC_00002513;geneIDs=comp144817_c0_seq1.path1;transcripts=comp144817_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42917267	42917935	.	+	.	ID=comp144817_c0_seq1.mrna1;geneID=comp144817_c0_seq1.path1;Name=comp144817_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=668;mismatches=1;indels=0;unknowns=0;Target=comp144817_c0_seq1 669 1 .;CDS_Target=comp144817_c0_seq1 94 2 .;locus=RLOC_00002513
ChrX	stalkie_big_nohaplotig	exon	42917267	42917935	99	+	.	Parent=comp144817_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42917268	42917360	.	+	0	Parent=comp144817_c0_seq1.mrna1
ChrX	gffcl	locus	42924977	42926317	.	+	.	ID=RLOC_00002514;geneIDs=comp153345_c0_seq1.path1;transcripts=comp153345_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42924977	42926317	.	+	.	ID=comp153345_c0_seq1.mrna1;geneID=comp153345_c0_seq1.path1;Name=comp153345_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=1053;mismatches=0;indels=0;unknowns=0;Target=comp153345_c0_seq1 419 571 .;locus=RLOC_00002514
ChrX	stalkie_big_nohaplotig	exon	42924977	42925190	100	+	.	Parent=comp153345_c0_seq1.mrna1;Target=comp153345_c0_seq1 840 1053 -
ChrX	stalkie_big_nohaplotig	exon	42925479	42926317	100	+	.	Parent=comp153345_c0_seq1.mrna1;Target=comp153345_c0_seq1 1 839 -
ChrX	stalkie_big_nohaplotig	CDS	42925747	42925899	.	+	0	Parent=comp153345_c0_seq1.mrna1
ChrX	gffcl	locus	42928213	42929489	.	.	.	ID=RLOC_00002515;geneIDs=FBgn0261606.2.path1,comp131610_c0_seq1.path1,comp152896_c0_seq1.path1;transcripts=comp131610_c0_seq1.mrna1,FBgn0261606.2.mrna1,comp152896_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42928213	42928471	.	-	.	ID=comp131610_c0_seq1.mrna1;geneID=comp131610_c0_seq1.path1;Name=comp131610_c0_seq1;Dir=antisensecoverage=100.0;identity=99.0;matches=204;mismatches=1;indels=1;unknowns=0;Target=comp131610_c0_seq1 11 70 .;locus=RLOC_00002515
ChrX	stalkie_big_nohaplotig	exon	42928213	42928394	98	-	.	Parent=comp131610_c0_seq1.mrna1;Target=comp131610_c0_seq1 1 181 -
ChrX	stalkie_big_nohaplotig	exon	42928448	42928471	100	-	.	Parent=comp131610_c0_seq1.mrna1;Target=comp131610_c0_seq1 182 205 -
ChrX	stalkie_big_nohaplotig	CDS	42928223	42928283	.	-	0	Parent=comp131610_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42928457	42929489	.	-	.	ID=FBgn0261606.2.mrna1;geneID=FBgn0261606.2.path1;Name=FBgn0261606.2;Dir=sensecoverage=100.0;identity=100.0;matches=507;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002515
ChrX	stalkie_big_nohaplotig	exon	42928457	42928582	100	-	.	Parent=FBgn0261606.2.mrna1;Target=FBgn0261606.2 382 507 +
ChrX	stalkie_big_nohaplotig	exon	42928788	42929105	100	-	.	Parent=FBgn0261606.2.mrna1;Target=FBgn0261606.2 64 381 +
ChrX	stalkie_big_nohaplotig	exon	42929427	42929489	100	-	.	Parent=FBgn0261606.2.mrna1;Target=FBgn0261606.2 1 63 +
ChrX	stalkie_big_nohaplotig	CDS	42928457	42928582	.	-	0	Parent=FBgn0261606.2.mrna1;Target=FBgn0261606.2 382 507 +
ChrX	stalkie_big_nohaplotig	CDS	42928788	42929105	.	-	0	Parent=FBgn0261606.2.mrna1;Target=FBgn0261606.2 64 381 +
ChrX	stalkie_big_nohaplotig	CDS	42929427	42929489	.	-	0	Parent=FBgn0261606.2.mrna1;Target=FBgn0261606.2 1 63 +
ChrX	stalkie_big_nohaplotig	mRNA	42929083	42929437	.	+	.	ID=comp152896_c0_seq1.mrna1;geneID=comp152896_c0_seq1.path1;Name=comp152896_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=354;mismatches=1;indels=0;unknowns=0;Target=comp152896_c0_seq1 355 1 .;CDS_Target=comp152896_c0_seq1 203 138 .;locus=RLOC_00002515
ChrX	stalkie_big_nohaplotig	exon	42929083	42929437	99	+	.	Parent=comp152896_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42929220	42929285	.	+	0	Parent=comp152896_c0_seq1.mrna1
ChrX	gffcl	locus	42932178	42932744	.	-	.	ID=RLOC_00002516;geneIDs=FBgn0053002.1.path1;transcripts=FBgn0053002.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42932178	42932744	.	-	.	ID=FBgn0053002.1.mrna1;geneID=FBgn0053002.1.path1;Name=FBgn0053002.1;Dir=sensecoverage=100.0;identity=100.0;matches=441;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002516
ChrX	stalkie_big_nohaplotig	exon	42932178	42932378	100	-	.	Parent=FBgn0053002.1.mrna1;Target=FBgn0053002.1 241 441 +
ChrX	stalkie_big_nohaplotig	exon	42932439	42932602	100	-	.	Parent=FBgn0053002.1.mrna1;Target=FBgn0053002.1 77 240 +
ChrX	stalkie_big_nohaplotig	exon	42932669	42932744	100	-	.	Parent=FBgn0053002.1.mrna1;Target=FBgn0053002.1 1 76 +
ChrX	stalkie_big_nohaplotig	CDS	42932178	42932378	.	-	0	Parent=FBgn0053002.1.mrna1;Target=FBgn0053002.1 241 441 +
ChrX	stalkie_big_nohaplotig	CDS	42932439	42932602	.	-	2	Parent=FBgn0053002.1.mrna1;Target=FBgn0053002.1 77 240 +
ChrX	stalkie_big_nohaplotig	CDS	42932669	42932744	.	-	0	Parent=FBgn0053002.1.mrna1;Target=FBgn0053002.1 1 76 +
ChrX	gffcl	locus	42934925	42936182	.	+	.	ID=RLOC_00002517;geneIDs=FBgn0031609.1.path1;transcripts=FBgn0031609.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42934925	42936182	.	+	.	ID=FBgn0031609.1.mrna1;geneID=FBgn0031609.1.path1;Name=FBgn0031609.1;Dir=sensecoverage=100.0;identity=100.0;matches=1170;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002517
ChrX	stalkie_big_nohaplotig	exon	42934925	42935288	100	+	.	Parent=FBgn0031609.1.mrna1;Target=FBgn0031609.1 1 364 +
ChrX	stalkie_big_nohaplotig	exon	42935377	42936182	100	+	.	Parent=FBgn0031609.1.mrna1;Target=FBgn0031609.1 365 1170 +
ChrX	stalkie_big_nohaplotig	CDS	42934925	42935288	.	+	0	Parent=FBgn0031609.1.mrna1;Target=FBgn0031609.1 1 364 +
ChrX	stalkie_big_nohaplotig	CDS	42935377	42936182	.	+	2	Parent=FBgn0031609.1.mrna1;Target=FBgn0031609.1 365 1170 +
ChrX	gffcl	locus	42937241	42938327	.	+	.	ID=RLOC_00002518;geneIDs=comp147543_c0_seq1.path1;transcripts=comp147543_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42937241	42938327	.	+	.	ID=comp147543_c0_seq1.mrna1;geneID=comp147543_c0_seq1.path1;Name=comp147543_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1082;mismatches=5;indels=0;unknowns=0;Target=comp147543_c0_seq1 1087 1 .;CDS_Target=comp147543_c0_seq1 597 472 .;locus=RLOC_00002518
ChrX	stalkie_big_nohaplotig	exon	42937241	42938327	99	+	.	Parent=comp147543_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42937712	42937837	.	+	0	Parent=comp147543_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42957247	42961027	.	-	.	ID=comp118766_c0_seq1.mrna1;geneID=comp118766_c0_seq1.path1;Name=comp118766_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=417;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002520
ChrX	stalkie_big_nohaplotig	exon	42957247	42957270	100	-	.	Parent=comp118766_c0_seq1.mrna1;Target=comp118766_c0_seq1 396 419 +
ChrX	stalkie_big_nohaplotig	exon	42960633	42961027	99	-	.	Parent=comp118766_c0_seq1.mrna1;Target=comp118766_c0_seq1 1 395 +
ChrX	stalkie_big_nohaplotig	CDS	42957249	42957270	.	-	1	Parent=comp118766_c0_seq1.mrna1;Target=comp118766_c0_seq1 396 417 +
ChrX	stalkie_big_nohaplotig	CDS	42960633	42960718	.	-	0	Parent=comp118766_c0_seq1.mrna1;Target=comp118766_c0_seq1 310 395 +
ChrX	gffcl	locus	42990606	42992515	.	-	.	ID=RLOC_00002521;geneIDs=FBgn0031853.4.path1;transcripts=FBgn0031853.4.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42990606	42992515	.	-	.	ID=FBgn0031853.4.mrna1;geneID=FBgn0031853.4.path1;Name=FBgn0031853.4;Dir=sensecoverage=100.0;identity=99.9;matches=1847;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002521
ChrX	stalkie_big_nohaplotig	exon	42990606	42991282	100	-	.	Parent=FBgn0031853.4.mrna1;Target=FBgn0031853.4 1172 1848 +
ChrX	stalkie_big_nohaplotig	exon	42991345	42992515	99	-	.	Parent=FBgn0031853.4.mrna1;Target=FBgn0031853.4 1 1171 +
ChrX	stalkie_big_nohaplotig	CDS	42990606	42991282	.	-	2	Parent=FBgn0031853.4.mrna1;Target=FBgn0031853.4 1172 1848 +
ChrX	stalkie_big_nohaplotig	CDS	42991345	42992515	.	-	0	Parent=FBgn0031853.4.mrna1;Target=FBgn0031853.4 1 1171 +
ChrX	gffcl	locus	42996787	42998338	.	+	.	ID=RLOC_00002522;geneIDs=FBgn0261387.1.path1;transcripts=FBgn0261387.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	42996787	42998338	.	+	.	ID=FBgn0261387.1.mrna1;geneID=FBgn0261387.1.path1;Name=FBgn0261387.1;Dir=indeterminatecoverage=99.3;identity=100.0;matches=1552;mismatches=0;indels=0;unknowns=0;Target=FBgn0261387.1 1563 12 .;CDS_Target=FBgn0261387.1 1563 13 .;locus=RLOC_00002522
ChrX	stalkie_big_nohaplotig	exon	42996787	42998338	100	+	.	Parent=FBgn0261387.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	42996788	42998338	.	+	0	Parent=FBgn0261387.1.mrna1
ChrX	gffcl	locus	43006117	43123440	.	.	.	ID=RLOC_00002523;geneIDs=FBgn0053196.path1,comp157960_c0_seq1.path1,comp163826_c0_seq1.path1;transcripts=comp163826_c0_seq1.mrna1,FBgn0053196.mrna1,FBgn0053196.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43006117	43110345	.	-	.	ID=comp163826_c0_seq1.mrna1;geneID=comp163826_c0_seq1.path1;Name=comp163826_c0_seq1;Dir=sensecoverage=99.5;identity=100.0;matches=32580;mismatches=4;indels=1;unknowns=0;locus=RLOC_00002523
ChrX	stalkie_big_nohaplotig	exon	43006117	43009032	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 29841 32756 +
ChrX	stalkie_big_nohaplotig	exon	43009099	43009305	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 29634 29840 +
ChrX	stalkie_big_nohaplotig	exon	43009392	43010183	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 28842 29633 +
ChrX	stalkie_big_nohaplotig	exon	43010262	43010459	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 28644 28841 +
ChrX	stalkie_big_nohaplotig	exon	43010546	43010743	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 28446 28643 +
ChrX	stalkie_big_nohaplotig	exon	43010997	43011599	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 27843 28445 +
ChrX	stalkie_big_nohaplotig	exon	43011663	43012748	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 26757 27842 +
ChrX	stalkie_big_nohaplotig	exon	43012840	43013163	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 26433 26756 +
ChrX	stalkie_big_nohaplotig	exon	43013254	43013856	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 25830 26432 +
ChrX	stalkie_big_nohaplotig	exon	43013914	43014261	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 25482 25829 +
ChrX	stalkie_big_nohaplotig	exon	43014323	43014637	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 25167 25481 +
ChrX	stalkie_big_nohaplotig	exon	43019484	43020434	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 24216 25166 +
ChrX	stalkie_big_nohaplotig	exon	43020494	43020790	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 23919 24215 +
ChrX	stalkie_big_nohaplotig	exon	43020845	43021186	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 23577 23918 +
ChrX	stalkie_big_nohaplotig	exon	43021248	43021559	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 23265 23576 +
ChrX	stalkie_big_nohaplotig	exon	43021623	43022267	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 22620 23264 +
ChrX	stalkie_big_nohaplotig	exon	43022324	43023268	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 21675 22619 +
ChrX	stalkie_big_nohaplotig	exon	43023327	43023641	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 21360 21674 +
ChrX	stalkie_big_nohaplotig	exon	43023707	43024351	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 20715 21359 +
ChrX	stalkie_big_nohaplotig	exon	43024423	43024728	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 20409 20714 +
ChrX	stalkie_big_nohaplotig	exon	43024784	43025089	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 20103 20408 +
ChrX	stalkie_big_nohaplotig	exon	43025149	43025484	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 19767 20102 +
ChrX	stalkie_big_nohaplotig	exon	43025543	43025860	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 19449 19766 +
ChrX	stalkie_big_nohaplotig	exon	43025917	43026027	99	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 19338 19448 +
ChrX	stalkie_big_nohaplotig	exon	43028286	43029128	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 18495 19337 +
ChrX	stalkie_big_nohaplotig	exon	43029191	43029490	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 18195 18494 +
ChrX	stalkie_big_nohaplotig	exon	43029550	43029888	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 17856 18194 +
ChrX	stalkie_big_nohaplotig	exon	43029946	43030257	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 17544 17855 +
ChrX	stalkie_big_nohaplotig	exon	43030319	43030824	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 17038 17543 +
ChrX	stalkie_big_nohaplotig	exon	43051532	43051658	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 16911 17037 +
ChrX	stalkie_big_nohaplotig	exon	43051725	43052030	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 16605 16910 +
ChrX	stalkie_big_nohaplotig	exon	43052084	43052404	99	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 16283 16604 +
ChrX	stalkie_big_nohaplotig	exon	43052464	43054920	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 13826 16282 +
ChrX	stalkie_big_nohaplotig	exon	43055197	43055688	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 13334 13825 +
ChrX	stalkie_big_nohaplotig	exon	43056030	43056212	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 13151 13333 +
ChrX	stalkie_big_nohaplotig	exon	43056372	43056593	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 12929 13150 +
ChrX	stalkie_big_nohaplotig	exon	43058079	43058987	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 12020 12928 +
ChrX	stalkie_big_nohaplotig	exon	43059281	43059358	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 11942 12019 +
ChrX	stalkie_big_nohaplotig	exon	43059554	43059622	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 11873 11941 +
ChrX	stalkie_big_nohaplotig	exon	43060721	43060864	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 11729 11872 +
ChrX	stalkie_big_nohaplotig	exon	43074581	43075384	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 10925 11728 +
ChrX	stalkie_big_nohaplotig	exon	43082100	43082192	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 10832 10924 +
ChrX	stalkie_big_nohaplotig	exon	43082257	43084065	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 9023 10831 +
ChrX	stalkie_big_nohaplotig	exon	43084212	43084526	99	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 8708 9022 +
ChrX	stalkie_big_nohaplotig	exon	43085001	43092275	99	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 1433 8707 +
ChrX	stalkie_big_nohaplotig	exon	43092802	43093119	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 1115 1432 +
ChrX	stalkie_big_nohaplotig	exon	43093424	43093795	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 743 1114 +
ChrX	stalkie_big_nohaplotig	exon	43093878	43094009	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 611 742 +
ChrX	stalkie_big_nohaplotig	exon	43108108	43108224	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 494 610 +
ChrX	stalkie_big_nohaplotig	exon	43109270	43109371	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 392 493 +
ChrX	stalkie_big_nohaplotig	exon	43110126	43110345	100	-	.	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 172 391 +
ChrX	stalkie_big_nohaplotig	CDS	43052395	43052404	.	-	2	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 16283 16293 +
ChrX	stalkie_big_nohaplotig	CDS	43052464	43054920	.	-	2	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 13826 16282 +
ChrX	stalkie_big_nohaplotig	CDS	43055197	43055688	.	-	2	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 13334 13825 +
ChrX	stalkie_big_nohaplotig	CDS	43056030	43056212	.	-	2	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 13151 13333 +
ChrX	stalkie_big_nohaplotig	CDS	43056372	43056593	.	-	2	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 12929 13150 +
ChrX	stalkie_big_nohaplotig	CDS	43058079	43058987	.	-	2	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 12020 12928 +
ChrX	stalkie_big_nohaplotig	CDS	43059281	43059358	.	-	2	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 11942 12019 +
ChrX	stalkie_big_nohaplotig	CDS	43059554	43059622	.	-	2	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 11873 11941 +
ChrX	stalkie_big_nohaplotig	CDS	43060721	43060864	.	-	2	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 11729 11872 +
ChrX	stalkie_big_nohaplotig	CDS	43074581	43075384	.	-	2	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 10925 11728 +
ChrX	stalkie_big_nohaplotig	CDS	43082100	43082192	.	-	2	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 10832 10924 +
ChrX	stalkie_big_nohaplotig	CDS	43082257	43084065	.	-	2	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 9023 10831 +
ChrX	stalkie_big_nohaplotig	CDS	43084212	43084526	.	-	2	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 8708 9022 +
ChrX	stalkie_big_nohaplotig	CDS	43085001	43092275	.	-	2	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 1433 8707 +
ChrX	stalkie_big_nohaplotig	CDS	43092802	43093119	.	-	2	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 1115 1432 +
ChrX	stalkie_big_nohaplotig	CDS	43093424	43093795	.	-	2	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 743 1114 +
ChrX	stalkie_big_nohaplotig	CDS	43093878	43094009	.	-	2	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 611 742 +
ChrX	stalkie_big_nohaplotig	CDS	43108108	43108224	.	-	2	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 494 610 +
ChrX	stalkie_big_nohaplotig	CDS	43109270	43109371	.	-	2	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 392 493 +
ChrX	stalkie_big_nohaplotig	CDS	43110126	43110345	.	-	0	Parent=comp163826_c0_seq1.mrna1;Target=comp163826_c0_seq1 172 391 +
ChrX	stalkie_big_nohaplotig	mRNA	43006118	43123440	.	-	.	ID=FBgn0053196.mrna1;geneID=FBgn0053196.path1;Name=FBgn0053196;Dir=sensecoverage=100.0;identity=99.9;matches=2406;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002523
ChrX	stalkie_big_nohaplotig	exon	43006118	43009032	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 29732 32646 +
ChrX	stalkie_big_nohaplotig	exon	43009099	43009305	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 29525 29731 +
ChrX	stalkie_big_nohaplotig	exon	43009392	43010183	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 28733 29524 +
ChrX	stalkie_big_nohaplotig	exon	43010262	43010459	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 28535 28732 +
ChrX	stalkie_big_nohaplotig	exon	43010546	43010743	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 28337 28534 +
ChrX	stalkie_big_nohaplotig	exon	43010997	43011599	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 27734 28336 +
ChrX	stalkie_big_nohaplotig	exon	43011663	43012748	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 26648 27733 +
ChrX	stalkie_big_nohaplotig	exon	43012840	43013163	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 26324 26647 +
ChrX	stalkie_big_nohaplotig	exon	43013254	43013856	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 25721 26323 +
ChrX	stalkie_big_nohaplotig	exon	43013914	43014261	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 25373 25720 +
ChrX	stalkie_big_nohaplotig	exon	43014323	43014637	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 25058 25372 +
ChrX	stalkie_big_nohaplotig	exon	43016613	43016767	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 2255 2409 +
ChrX	stalkie_big_nohaplotig	exon	43016836	43017147	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 1943 2254 +
ChrX	stalkie_big_nohaplotig	exon	43017214	43017867	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 1289 1942 +
ChrX	stalkie_big_nohaplotig	exon	43017930	43018244	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 974 1288 +
ChrX	stalkie_big_nohaplotig	exon	43018304	43018606	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 671 973 +
ChrX	stalkie_big_nohaplotig	exon	43018678	43019325	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 23 670 +
ChrX	stalkie_big_nohaplotig	exon	43019484	43020434	86	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 24107 25057 +
ChrX	stalkie_big_nohaplotig	exon	43020494	43020790	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 23810 24106 +
ChrX	stalkie_big_nohaplotig	exon	43020845	43021186	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 23468 23809 +
ChrX	stalkie_big_nohaplotig	exon	43021248	43021559	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 23156 23467 +
ChrX	stalkie_big_nohaplotig	exon	43021623	43022267	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 22511 23155 +
ChrX	stalkie_big_nohaplotig	exon	43022324	43023268	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 21566 22510 +
ChrX	stalkie_big_nohaplotig	exon	43023327	43023641	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 21251 21565 +
ChrX	stalkie_big_nohaplotig	exon	43023707	43024351	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 20606 21250 +
ChrX	stalkie_big_nohaplotig	exon	43024423	43024728	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 20300 20605 +
ChrX	stalkie_big_nohaplotig	exon	43024784	43025089	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 19994 20299 +
ChrX	stalkie_big_nohaplotig	exon	43025149	43025484	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 19658 19993 +
ChrX	stalkie_big_nohaplotig	exon	43025543	43025860	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 19340 19657 +
ChrX	stalkie_big_nohaplotig	exon	43025917	43026027	99	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 19229 19339 +
ChrX	stalkie_big_nohaplotig	exon	43028286	43029128	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 18386 19228 +
ChrX	stalkie_big_nohaplotig	exon	43029191	43029490	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 18086 18385 +
ChrX	stalkie_big_nohaplotig	exon	43029550	43029888	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 17747 18085 +
ChrX	stalkie_big_nohaplotig	exon	43029946	43030257	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 17435 17746 +
ChrX	stalkie_big_nohaplotig	exon	43030319	43030824	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 16929 17434 +
ChrX	stalkie_big_nohaplotig	exon	43045002	43045021	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 3908 3927 +
ChrX	stalkie_big_nohaplotig	exon	43045214	43045540	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 3581 3907 +
ChrX	stalkie_big_nohaplotig	exon	43045930	43046238	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 3272 3580 +
ChrX	stalkie_big_nohaplotig	exon	43046364	43046702	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 2933 3271 +
ChrX	stalkie_big_nohaplotig	exon	43046769	43047095	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 2606 2932 +
ChrX	stalkie_big_nohaplotig	exon	43047277	43047585	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 2297 2605 +
ChrX	stalkie_big_nohaplotig	exon	43047647	43047970	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 1973 2296 +
ChrX	stalkie_big_nohaplotig	exon	43048075	43048398	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 1649 1972 +
ChrX	stalkie_big_nohaplotig	exon	43048681	43048995	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 1334 1648 +
ChrX	stalkie_big_nohaplotig	exon	43049346	43049675	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 1004 1333 +
ChrX	stalkie_big_nohaplotig	exon	43049939	43050277	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 665 1003 +
ChrX	stalkie_big_nohaplotig	exon	43050339	43050656	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 347 664 +
ChrX	stalkie_big_nohaplotig	exon	43050716	43051039	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 23 346 +
ChrX	stalkie_big_nohaplotig	exon	43051347	43051368	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 1 22 +
ChrX	stalkie_big_nohaplotig	exon	43051532	43051658	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 16802 16928 +
ChrX	stalkie_big_nohaplotig	exon	43051725	43052030	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 16496 16801 +
ChrX	stalkie_big_nohaplotig	exon	43052084	43052404	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 16175 16495 +
ChrX	stalkie_big_nohaplotig	exon	43052464	43054920	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 13718 16174 +
ChrX	stalkie_big_nohaplotig	exon	43055197	43055688	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 13226 13717 +
ChrX	stalkie_big_nohaplotig	exon	43056030	43056212	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 13043 13225 +
ChrX	stalkie_big_nohaplotig	exon	43056372	43056593	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 12821 13042 +
ChrX	stalkie_big_nohaplotig	exon	43058079	43058987	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 11912 12820 +
ChrX	stalkie_big_nohaplotig	exon	43059281	43059358	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 11834 11911 +
ChrX	stalkie_big_nohaplotig	exon	43059554	43059622	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 11765 11833 +
ChrX	stalkie_big_nohaplotig	exon	43060721	43060864	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 11621 11764 +
ChrX	stalkie_big_nohaplotig	exon	43074581	43075384	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 10817 11620 +
ChrX	stalkie_big_nohaplotig	exon	43082100	43082192	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 10724 10816 +
ChrX	stalkie_big_nohaplotig	exon	43082257	43084065	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 8915 10723 +
ChrX	stalkie_big_nohaplotig	exon	43084212	43084526	99	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 8600 8914 +
ChrX	stalkie_big_nohaplotig	exon	43085001	43092275	99	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 1325 8599 +
ChrX	stalkie_big_nohaplotig	exon	43092802	43093119	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 1007 1324 +
ChrX	stalkie_big_nohaplotig	exon	43093424	43093795	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 635 1006 +
ChrX	stalkie_big_nohaplotig	exon	43093878	43094009	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 503 634 +
ChrX	stalkie_big_nohaplotig	exon	43108108	43108224	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 386 502 +
ChrX	stalkie_big_nohaplotig	exon	43109270	43109371	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 284 385 +
ChrX	stalkie_big_nohaplotig	exon	43110126	43110345	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 64 283 +
ChrX	stalkie_big_nohaplotig	exon	43123384	43123440	100	-	.	Parent=FBgn0053196.mrna1;Target=FBgn0053196 7 63 +
ChrX	stalkie_big_nohaplotig	CDS	43006118	43009032	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 29732 32646 +
ChrX	stalkie_big_nohaplotig	CDS	43009099	43009305	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 29525 29731 +
ChrX	stalkie_big_nohaplotig	CDS	43009392	43010183	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 28733 29524 +
ChrX	stalkie_big_nohaplotig	CDS	43010262	43010459	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 28535 28732 +
ChrX	stalkie_big_nohaplotig	CDS	43010546	43010743	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 28337 28534 +
ChrX	stalkie_big_nohaplotig	CDS	43010997	43011599	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 27734 28336 +
ChrX	stalkie_big_nohaplotig	CDS	43011663	43012748	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 26648 27733 +
ChrX	stalkie_big_nohaplotig	CDS	43012840	43013163	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 26324 26647 +
ChrX	stalkie_big_nohaplotig	CDS	43013254	43013856	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 25721 26323 +
ChrX	stalkie_big_nohaplotig	CDS	43013914	43014261	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 25373 25720 +
ChrX	stalkie_big_nohaplotig	CDS	43014323	43014637	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 25058 25372 +
ChrX	stalkie_big_nohaplotig	CDS	43016613	43016767	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 2255 2409 +
ChrX	stalkie_big_nohaplotig	CDS	43016836	43017147	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 1943 2254 +
ChrX	stalkie_big_nohaplotig	CDS	43017214	43017867	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 1289 1942 +
ChrX	stalkie_big_nohaplotig	CDS	43017930	43018244	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 974 1288 +
ChrX	stalkie_big_nohaplotig	CDS	43018304	43018606	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 671 973 +
ChrX	stalkie_big_nohaplotig	CDS	43018678	43019325	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 23 670 +
ChrX	stalkie_big_nohaplotig	CDS	43019484	43019505	86	-	0	Parent=FBgn0053196.mrna1;Target=FBgn0053196 1 22 +
ChrX	stalkie_big_nohaplotig	CDS	43019484	43020434	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 24107 25057 +
ChrX	stalkie_big_nohaplotig	CDS	43020494	43020790	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 23810 24106 +
ChrX	stalkie_big_nohaplotig	CDS	43020845	43021186	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 23468 23809 +
ChrX	stalkie_big_nohaplotig	CDS	43021248	43021559	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 23156 23467 +
ChrX	stalkie_big_nohaplotig	CDS	43021623	43022267	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 22511 23155 +
ChrX	stalkie_big_nohaplotig	CDS	43022324	43023268	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 21566 22510 +
ChrX	stalkie_big_nohaplotig	CDS	43023327	43023641	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 21251 21565 +
ChrX	stalkie_big_nohaplotig	CDS	43023707	43024351	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 20606 21250 +
ChrX	stalkie_big_nohaplotig	CDS	43024423	43024728	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 20300 20605 +
ChrX	stalkie_big_nohaplotig	CDS	43024784	43025089	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 19994 20299 +
ChrX	stalkie_big_nohaplotig	CDS	43025149	43025484	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 19658 19993 +
ChrX	stalkie_big_nohaplotig	CDS	43025543	43025860	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 19340 19657 +
ChrX	stalkie_big_nohaplotig	CDS	43025917	43026027	99	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 19229 19339 +
ChrX	stalkie_big_nohaplotig	CDS	43028286	43029128	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 18386 19228 +
ChrX	stalkie_big_nohaplotig	CDS	43029191	43029490	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 18086 18385 +
ChrX	stalkie_big_nohaplotig	CDS	43029550	43029888	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 17747 18085 +
ChrX	stalkie_big_nohaplotig	CDS	43029946	43030257	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 17435 17746 +
ChrX	stalkie_big_nohaplotig	CDS	43030319	43030824	100	-	2	Parent=FBgn0053196.mrna1;Target=FBgn0053196 16929 17434 +
ChrX	stalkie_big_nohaplotig	CDS	43045002	43045021	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 3908 3927 +
ChrX	stalkie_big_nohaplotig	CDS	43045214	43045540	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 3581 3907 +
ChrX	stalkie_big_nohaplotig	CDS	43045930	43046238	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 3272 3580 +
ChrX	stalkie_big_nohaplotig	CDS	43046364	43046702	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 2933 3271 +
ChrX	stalkie_big_nohaplotig	CDS	43046769	43047095	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 2606 2932 +
ChrX	stalkie_big_nohaplotig	CDS	43047277	43047585	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 2297 2605 +
ChrX	stalkie_big_nohaplotig	CDS	43047647	43047970	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 1973 2296 +
ChrX	stalkie_big_nohaplotig	CDS	43048075	43048398	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 1649 1972 +
ChrX	stalkie_big_nohaplotig	CDS	43048681	43048995	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 1334 1648 +
ChrX	stalkie_big_nohaplotig	CDS	43049346	43049675	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 1004 1333 +
ChrX	stalkie_big_nohaplotig	CDS	43049939	43050277	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 665 1003 +
ChrX	stalkie_big_nohaplotig	CDS	43050339	43050656	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 347 664 +
ChrX	stalkie_big_nohaplotig	CDS	43050716	43051039	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 23 346 +
ChrX	stalkie_big_nohaplotig	CDS	43051347	43051368	100	-	0	Parent=FBgn0053196.mrna1;Target=FBgn0053196 1 22 +
ChrX	stalkie_big_nohaplotig	CDS	43051532	43051658	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 16802 16928 +
ChrX	stalkie_big_nohaplotig	CDS	43051725	43052030	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 16496 16801 +
ChrX	stalkie_big_nohaplotig	CDS	43052084	43052404	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 16175 16495 +
ChrX	stalkie_big_nohaplotig	CDS	43052464	43054920	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 13718 16174 +
ChrX	stalkie_big_nohaplotig	CDS	43055197	43055688	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 13226 13717 +
ChrX	stalkie_big_nohaplotig	CDS	43056030	43056212	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 13043 13225 +
ChrX	stalkie_big_nohaplotig	CDS	43056372	43056593	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 12821 13042 +
ChrX	stalkie_big_nohaplotig	CDS	43058079	43058987	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 11912 12820 +
ChrX	stalkie_big_nohaplotig	CDS	43059281	43059358	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 11834 11911 +
ChrX	stalkie_big_nohaplotig	CDS	43059554	43059622	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 11765 11833 +
ChrX	stalkie_big_nohaplotig	CDS	43060721	43060864	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 11621 11764 +
ChrX	stalkie_big_nohaplotig	CDS	43074581	43075384	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 10817 11620 +
ChrX	stalkie_big_nohaplotig	CDS	43082100	43082192	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 10724 10816 +
ChrX	stalkie_big_nohaplotig	CDS	43082257	43084065	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 8915 10723 +
ChrX	stalkie_big_nohaplotig	CDS	43084212	43084526	99	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 8600 8914 +
ChrX	stalkie_big_nohaplotig	CDS	43085001	43092275	99	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 1325 8599 +
ChrX	stalkie_big_nohaplotig	CDS	43092802	43093119	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 1007 1324 +
ChrX	stalkie_big_nohaplotig	CDS	43093424	43093795	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 635 1006 +
ChrX	stalkie_big_nohaplotig	CDS	43093878	43094009	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 503 634 +
ChrX	stalkie_big_nohaplotig	CDS	43108108	43108224	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 386 502 +
ChrX	stalkie_big_nohaplotig	CDS	43109270	43109371	100	-	1	Parent=FBgn0053196.mrna1;Target=FBgn0053196 284 385 +
ChrX	stalkie_big_nohaplotig	CDS	43110126	43110345	100	-	0	Parent=FBgn0053196.mrna1;Target=FBgn0053196 64 283 +
ChrX	stalkie_big_nohaplotig	CDS	43123384	43123440	100	-	0	Parent=FBgn0053196.mrna1;Target=FBgn0053196 7 63 +
ChrX	stalkie_big_nohaplotig	mRNA	43006118	43123440	.	-	.	ID=FBgn0053196.mrna1;geneID=FBgn0053196.path1;Name=FBgn0053196;Dir=sensecoverage=100.0;identity=100.0;matches=32636;mismatches=4;indels=0;unknowns=0;locus=RLOC_00002523
ChrX	stalkie_big_nohaplotig	exon	43006118	43123440	.	-	.	Parent=FBgn0053196.mrna1
ChrX	stalkie_big_nohaplotig	CDS	43071416	43071544	.	-	0	Parent=FBgn0053196.mrna1
ChrX	gffcl	locus	43222787	43223182	.	+	.	ID=RLOC_00002524;geneIDs=comp4712_c1_seq1.path1;transcripts=comp4712_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43222787	43223182	.	+	.	ID=comp4712_c1_seq1.mrna1;geneID=comp4712_c1_seq1.path1;Name=comp4712_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=394;mismatches=2;indels=0;unknowns=0;Target=comp4712_c1_seq1 396 1 .;CDS_Target=comp4712_c1_seq1 395 339 .;locus=RLOC_00002524
ChrX	stalkie_big_nohaplotig	exon	43222787	43223182	99	+	.	Parent=comp4712_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	43223125	43223181	.	+	0	Parent=comp4712_c1_seq1.mrna1
ChrX	gffcl	locus	43309600	43311427	.	+	.	ID=RLOC_00002525;geneIDs=comp151000_c2_seq1.path1;transcripts=comp151000_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43309600	43311427	.	+	.	ID=comp151000_c2_seq1.mrna1;geneID=comp151000_c2_seq1.path1;Name=comp151000_c2_seq1;Dir=antisensecoverage=100.0;identity=93.8;matches=692;mismatches=40;indels=6;unknowns=0;Target=comp151000_c2_seq1 676 735 .;locus=RLOC_00002525
ChrX	stalkie_big_nohaplotig	exon	43309600	43310104	94	+	.	Parent=comp151000_c2_seq1.mrna1;Target=comp151000_c2_seq1 229 736 -
ChrX	stalkie_big_nohaplotig	exon	43310732	43310913	91	+	.	Parent=comp151000_c2_seq1.mrna1;Target=comp151000_c2_seq1 48 228 -
ChrX	stalkie_big_nohaplotig	exon	43311381	43311427	97	+	.	Parent=comp151000_c2_seq1.mrna1;Target=comp151000_c2_seq1 1 47 -
ChrX	stalkie_big_nohaplotig	CDS	43309601	43309660	.	+	0	Parent=comp151000_c2_seq1.mrna1
ChrX	gffcl	locus	43324082	43327185	.	+	.	ID=RLOC_00002527;geneIDs=FBgn0031853.8.path1;transcripts=FBgn0031853.8.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43324082	43327185	.	+	.	ID=FBgn0031853.8.mrna1;geneID=FBgn0031853.8.path1;Name=FBgn0031853.8;Dir=sensecoverage=100.0;identity=100.0;matches=2960;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002527
ChrX	stalkie_big_nohaplotig	exon	43324082	43324348	99	+	.	Parent=FBgn0031853.8.mrna1;Target=FBgn0031853.8 1 267 +
ChrX	stalkie_big_nohaplotig	exon	43324408	43326511	100	+	.	Parent=FBgn0031853.8.mrna1;Target=FBgn0031853.8 268 2371 +
ChrX	stalkie_big_nohaplotig	exon	43326596	43327185	100	+	.	Parent=FBgn0031853.8.mrna1;Target=FBgn0031853.8 2372 2961 +
ChrX	stalkie_big_nohaplotig	CDS	43324082	43324348	.	+	0	Parent=FBgn0031853.8.mrna1;Target=FBgn0031853.8 1 267 +
ChrX	stalkie_big_nohaplotig	CDS	43324408	43326511	.	+	0	Parent=FBgn0031853.8.mrna1;Target=FBgn0031853.8 268 2371 +
ChrX	stalkie_big_nohaplotig	CDS	43326596	43327185	.	+	2	Parent=FBgn0031853.8.mrna1;Target=FBgn0031853.8 2372 2961 +
ChrX	gffcl	locus	43349134	43353234	.	-	.	ID=RLOC_00002528;geneIDs=FBgn0031619.1.path1;transcripts=FBgn0031619.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43349134	43353234	.	-	.	ID=FBgn0031619.1.mrna1;geneID=FBgn0031619.1.path1;Name=FBgn0031619.1;Dir=sensecoverage=100.0;identity=100.0;matches=1029;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002528
ChrX	stalkie_big_nohaplotig	exon	43349134	43349252	100	-	.	Parent=FBgn0031619.1.mrna1;Target=FBgn0031619.1 911 1029 +
ChrX	stalkie_big_nohaplotig	exon	43349316	43349547	100	-	.	Parent=FBgn0031619.1.mrna1;Target=FBgn0031619.1 679 910 +
ChrX	stalkie_big_nohaplotig	exon	43349662	43349811	100	-	.	Parent=FBgn0031619.1.mrna1;Target=FBgn0031619.1 529 678 +
ChrX	stalkie_big_nohaplotig	exon	43352576	43352817	100	-	.	Parent=FBgn0031619.1.mrna1;Target=FBgn0031619.1 287 528 +
ChrX	stalkie_big_nohaplotig	exon	43352949	43353234	100	-	.	Parent=FBgn0031619.1.mrna1;Target=FBgn0031619.1 1 286 +
ChrX	stalkie_big_nohaplotig	CDS	43349134	43349252	.	-	2	Parent=FBgn0031619.1.mrna1;Target=FBgn0031619.1 911 1029 +
ChrX	stalkie_big_nohaplotig	CDS	43349316	43349547	.	-	0	Parent=FBgn0031619.1.mrna1;Target=FBgn0031619.1 679 910 +
ChrX	stalkie_big_nohaplotig	CDS	43349662	43349811	.	-	0	Parent=FBgn0031619.1.mrna1;Target=FBgn0031619.1 529 678 +
ChrX	stalkie_big_nohaplotig	CDS	43352576	43352817	.	-	2	Parent=FBgn0031619.1.mrna1;Target=FBgn0031619.1 287 528 +
ChrX	stalkie_big_nohaplotig	CDS	43352949	43353234	.	-	0	Parent=FBgn0031619.1.mrna1;Target=FBgn0031619.1 1 286 +
ChrX	gffcl	locus	43397770	43403572	.	-	.	ID=RLOC_00002529;geneIDs=FBgn0004583.1.path1;transcripts=FBgn0004583.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43397770	43403572	.	-	.	ID=FBgn0004583.1.mrna1;geneID=FBgn0004583.1.path1;Name=FBgn0004583.1;Dir=sensecoverage=100.0;identity=100.0;matches=4641;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002529
ChrX	stalkie_big_nohaplotig	exon	43397770	43398413	100	-	.	Parent=FBgn0004583.1.mrna1;Target=FBgn0004583.1 3998 4641 +
ChrX	stalkie_big_nohaplotig	exon	43398471	43402143	100	-	.	Parent=FBgn0004583.1.mrna1;Target=FBgn0004583.1 325 3997 +
ChrX	stalkie_big_nohaplotig	exon	43402203	43402282	100	-	.	Parent=FBgn0004583.1.mrna1;Target=FBgn0004583.1 245 324 +
ChrX	stalkie_big_nohaplotig	exon	43403256	43403401	100	-	.	Parent=FBgn0004583.1.mrna1;Target=FBgn0004583.1 99 244 +
ChrX	stalkie_big_nohaplotig	exon	43403475	43403572	100	-	.	Parent=FBgn0004583.1.mrna1;Target=FBgn0004583.1 1 98 +
ChrX	stalkie_big_nohaplotig	CDS	43397770	43398413	.	-	2	Parent=FBgn0004583.1.mrna1;Target=FBgn0004583.1 3998 4641 +
ChrX	stalkie_big_nohaplotig	CDS	43398471	43402143	.	-	0	Parent=FBgn0004583.1.mrna1;Target=FBgn0004583.1 325 3997 +
ChrX	stalkie_big_nohaplotig	CDS	43402203	43402282	.	-	2	Parent=FBgn0004583.1.mrna1;Target=FBgn0004583.1 245 324 +
ChrX	stalkie_big_nohaplotig	CDS	43403256	43403401	.	-	1	Parent=FBgn0004583.1.mrna1;Target=FBgn0004583.1 99 244 +
ChrX	stalkie_big_nohaplotig	CDS	43403475	43403572	.	-	0	Parent=FBgn0004583.1.mrna1;Target=FBgn0004583.1 1 98 +
ChrX	gffcl	locus	43413551	43413886	.	-	.	ID=RLOC_00002530;geneIDs=comp119051_c0_seq1.path1;transcripts=comp119051_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43413551	43413886	.	-	.	ID=comp119051_c0_seq1.mrna1;geneID=comp119051_c0_seq1.path1;Name=comp119051_c0_seq1;Dir=indeterminatecoverage=90.8;identity=100.0;matches=336;mismatches=0;indels=0;unknowns=0;Target=comp119051_c0_seq1 370 35 .;CDS_Target=comp119051_c0_seq1 162 82 .;locus=RLOC_00002530
ChrX	stalkie_big_nohaplotig	exon	43413551	43413886	100	-	.	Parent=comp119051_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	43413759	43413839	.	-	0	Parent=comp119051_c0_seq1.mrna1
ChrX	gffcl	locus	43415249	43415600	.	-	.	ID=RLOC_00002531;geneIDs=comp106047_c0_seq1.path1;transcripts=comp106047_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43415249	43415600	.	-	.	ID=comp106047_c0_seq1.mrna1;geneID=comp106047_c0_seq1.path1;Name=comp106047_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=343;mismatches=1;indels=8;unknowns=0;Target=comp106047_c0_seq1 344 1 .;CDS_Target=comp106047_c0_seq1 305 246 .;locus=RLOC_00002531
ChrX	stalkie_big_nohaplotig	exon	43415249	43415600	97	-	.	Parent=comp106047_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	43415288	43415347	.	-	0	Parent=comp106047_c0_seq1.mrna1
ChrX	gffcl	locus	43421107	43437964	.	-	.	ID=RLOC_00002532;geneIDs=FBgn0016977.1.path1;transcripts=FBgn0016977.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43421107	43437964	.	-	.	ID=FBgn0016977.1.mrna1;geneID=FBgn0016977.1.path1;Name=FBgn0016977.1;Dir=sensecoverage=99.3;identity=99.9;matches=14088;mismatches=1;indels=15;unknowns=0;locus=RLOC_00002532
ChrX	stalkie_big_nohaplotig	exon	43421107	43432485	99	-	.	Parent=FBgn0016977.1.mrna1;Target=FBgn0016977.1 2830 14193 +
ChrX	stalkie_big_nohaplotig	exon	43432667	43432806	100	-	.	Parent=FBgn0016977.1.mrna1;Target=FBgn0016977.1 2690 2829 +
ChrX	stalkie_big_nohaplotig	exon	43432872	43433435	100	-	.	Parent=FBgn0016977.1.mrna1;Target=FBgn0016977.1 2126 2689 +
ChrX	stalkie_big_nohaplotig	exon	43434356	43435282	100	-	.	Parent=FBgn0016977.1.mrna1;Target=FBgn0016977.1 1199 2125 +
ChrX	stalkie_big_nohaplotig	exon	43436767	43437614	100	-	.	Parent=FBgn0016977.1.mrna1;Target=FBgn0016977.1 351 1198 +
ChrX	stalkie_big_nohaplotig	exon	43437719	43437964	100	-	.	Parent=FBgn0016977.1.mrna1;Target=FBgn0016977.1 105 350 +
ChrX	stalkie_big_nohaplotig	CDS	43421107	43432485	.	-	0	Parent=FBgn0016977.1.mrna1;Target=FBgn0016977.1 2830 14193 +
ChrX	stalkie_big_nohaplotig	CDS	43432667	43432806	.	-	2	Parent=FBgn0016977.1.mrna1;Target=FBgn0016977.1 2690 2829 +
ChrX	stalkie_big_nohaplotig	CDS	43432872	43433435	.	-	2	Parent=FBgn0016977.1.mrna1;Target=FBgn0016977.1 2126 2689 +
ChrX	stalkie_big_nohaplotig	CDS	43434356	43435282	.	-	2	Parent=FBgn0016977.1.mrna1;Target=FBgn0016977.1 1199 2125 +
ChrX	stalkie_big_nohaplotig	CDS	43436767	43437614	.	-	1	Parent=FBgn0016977.1.mrna1;Target=FBgn0016977.1 351 1198 +
ChrX	stalkie_big_nohaplotig	CDS	43437719	43437963	.	-	0	Parent=FBgn0016977.1.mrna1;Target=FBgn0016977.1 106 350 +
ChrX	gffcl	locus	43471822	43472430	.	-	.	ID=RLOC_00002533;geneIDs=comp143685_c0_seq1.path1;transcripts=comp143685_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43471822	43472430	.	-	.	ID=comp143685_c0_seq1.mrna1;geneID=comp143685_c0_seq1.path1;Name=comp143685_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=606;mismatches=0;indels=3;unknowns=0;Target=comp143685_c0_seq1 606 1 .;CDS_Target=comp143685_c0_seq1 321 199 .;locus=RLOC_00002533
ChrX	stalkie_big_nohaplotig	exon	43471822	43472430	99	-	.	Parent=comp143685_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	43472107	43472229	.	-	0	Parent=comp143685_c0_seq1.mrna1
ChrX	gffcl	locus	43498994	43501282	.	-	.	ID=RLOC_00002534;geneIDs=FBgn0031229.1.path1;transcripts=FBgn0031229.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43498994	43501282	.	-	.	ID=FBgn0031229.1.mrna1;geneID=FBgn0031229.1.path1;Name=FBgn0031229.1;Dir=sensecoverage=100.0;identity=99.4;matches=1076;mismatches=7;indels=0;unknowns=0;locus=RLOC_00002534
ChrX	stalkie_big_nohaplotig	exon	43498994	43499170	100	-	.	Parent=FBgn0031229.1.mrna1;Target=FBgn0031229.1 907 1083 +
ChrX	stalkie_big_nohaplotig	exon	43500258	43500883	99	-	.	Parent=FBgn0031229.1.mrna1;Target=FBgn0031229.1 281 906 +
ChrX	stalkie_big_nohaplotig	exon	43500947	43501076	99	-	.	Parent=FBgn0031229.1.mrna1;Target=FBgn0031229.1 151 280 +
ChrX	stalkie_big_nohaplotig	exon	43501133	43501282	100	-	.	Parent=FBgn0031229.1.mrna1;Target=FBgn0031229.1 1 150 +
ChrX	stalkie_big_nohaplotig	CDS	43498994	43499170	.	-	0	Parent=FBgn0031229.1.mrna1;Target=FBgn0031229.1 907 1083 +
ChrX	stalkie_big_nohaplotig	CDS	43500258	43500883	.	-	2	Parent=FBgn0031229.1.mrna1;Target=FBgn0031229.1 281 906 +
ChrX	stalkie_big_nohaplotig	CDS	43500947	43501076	.	-	0	Parent=FBgn0031229.1.mrna1;Target=FBgn0031229.1 151 280 +
ChrX	stalkie_big_nohaplotig	CDS	43501133	43501282	.	-	0	Parent=FBgn0031229.1.mrna1;Target=FBgn0031229.1 1 150 +
ChrX	gffcl	locus	43504044	43507310	.	+	.	ID=RLOC_00002535;geneIDs=FBgn0031255.1.path1;transcripts=FBgn0031255.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43504044	43507310	.	+	.	ID=FBgn0031255.1.mrna1;geneID=FBgn0031255.1.path1;Name=FBgn0031255.1;Dir=sensecoverage=99.0;identity=100.0;matches=1675;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002535
ChrX	stalkie_big_nohaplotig	exon	43504044	43504510	100	+	.	Parent=FBgn0031255.1.mrna1;Target=FBgn0031255.1 18 484 +
ChrX	stalkie_big_nohaplotig	exon	43504913	43505091	100	+	.	Parent=FBgn0031255.1.mrna1;Target=FBgn0031255.1 485 663 +
ChrX	stalkie_big_nohaplotig	exon	43505176	43505816	100	+	.	Parent=FBgn0031255.1.mrna1;Target=FBgn0031255.1 664 1304 +
ChrX	stalkie_big_nohaplotig	exon	43505880	43506054	100	+	.	Parent=FBgn0031255.1.mrna1;Target=FBgn0031255.1 1305 1479 +
ChrX	stalkie_big_nohaplotig	exon	43507098	43507310	100	+	.	Parent=FBgn0031255.1.mrna1;Target=FBgn0031255.1 1480 1692 +
ChrX	stalkie_big_nohaplotig	CDS	43504045	43504510	.	+	0	Parent=FBgn0031255.1.mrna1;Target=FBgn0031255.1 19 484 +
ChrX	stalkie_big_nohaplotig	CDS	43504913	43505091	.	+	2	Parent=FBgn0031255.1.mrna1;Target=FBgn0031255.1 485 663 +
ChrX	stalkie_big_nohaplotig	CDS	43505176	43505816	.	+	0	Parent=FBgn0031255.1.mrna1;Target=FBgn0031255.1 664 1304 +
ChrX	stalkie_big_nohaplotig	CDS	43505880	43506054	.	+	1	Parent=FBgn0031255.1.mrna1;Target=FBgn0031255.1 1305 1479 +
ChrX	stalkie_big_nohaplotig	CDS	43507098	43507310	.	+	0	Parent=FBgn0031255.1.mrna1;Target=FBgn0031255.1 1480 1692 +
ChrX	gffcl	locus	43511174	43511901	.	+	.	ID=RLOC_00002536;geneIDs=FBgn0053635.1.path1;transcripts=FBgn0053635.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43511174	43511901	.	+	.	ID=FBgn0053635.1.mrna1;geneID=FBgn0053635.1.path1;Name=FBgn0053635.1;Dir=sensecoverage=100.0;identity=100.0;matches=663;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002536
ChrX	stalkie_big_nohaplotig	exon	43511174	43511410	100	+	.	Parent=FBgn0053635.1.mrna1;Target=FBgn0053635.1 1 237 +
ChrX	stalkie_big_nohaplotig	exon	43511476	43511901	100	+	.	Parent=FBgn0053635.1.mrna1;Target=FBgn0053635.1 238 663 +
ChrX	stalkie_big_nohaplotig	CDS	43511174	43511410	.	+	0	Parent=FBgn0053635.1.mrna1;Target=FBgn0053635.1 1 237 +
ChrX	stalkie_big_nohaplotig	CDS	43511476	43511901	.	+	0	Parent=FBgn0053635.1.mrna1;Target=FBgn0053635.1 238 663 +
ChrX	gffcl	locus	43529029	43530513	.	-	.	ID=RLOC_00002538;geneIDs=comp155968_c1_seq1.path1;transcripts=comp155968_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43529029	43530513	.	-	.	ID=comp155968_c1_seq1.mrna1;geneID=comp155968_c1_seq1.path1;Name=comp155968_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1484;mismatches=1;indels=12;unknowns=0;Target=comp155968_c1_seq1 1497 1 .;CDS_Target=comp155968_c1_seq1 543 382 .;locus=RLOC_00002538
ChrX	stalkie_big_nohaplotig	exon	43529029	43530513	99	-	.	Parent=comp155968_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	43529971	43530132	.	-	0	Parent=comp155968_c1_seq1.mrna1
ChrX	gffcl	locus	43530909	43531049	.	-	.	ID=RLOC_00002539;geneIDs=comp113229_c0_seq1.path1;transcripts=comp113229_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43530909	43531049	.	-	.	ID=comp113229_c0_seq1.mrna1;geneID=comp113229_c0_seq1.path1;Name=comp113229_c0_seq1;Dir=indeterminatecoverage=37.3;identity=100.0;matches=141;mismatches=0;indels=0;unknowns=0;Target=comp113229_c0_seq1 142 2 .;CDS_Target=comp113229_c0_seq1 58 2 .;locus=RLOC_00002539
ChrX	stalkie_big_nohaplotig	exon	43530909	43531049	100	-	.	Parent=comp113229_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	43530993	43531049	.	-	0	Parent=comp113229_c0_seq1.mrna1
ChrX	gffcl	locus	43531766	43532227	.	-	.	ID=RLOC_00002540;geneIDs=comp146232_c0_seq1.path1;transcripts=comp146232_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43531766	43532227	.	-	.	ID=comp146232_c0_seq1.mrna1;geneID=comp146232_c0_seq1.path1;Name=comp146232_c0_seq1;Dir=indeterminatecoverage=95.7;identity=99.8;matches=461;mismatches=1;indels=0;unknowns=0;Target=comp146232_c0_seq1 483 22 .;CDS_Target=comp146232_c0_seq1 373 275 .;locus=RLOC_00002540
ChrX	stalkie_big_nohaplotig	exon	43531766	43532227	99	-	.	Parent=comp146232_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	43531876	43531974	.	-	0	Parent=comp146232_c0_seq1.mrna1
ChrX	gffcl	locus	43532340	43532603	.	+	.	ID=RLOC_00002541;geneIDs=comp116062_c0_seq1.path1;transcripts=comp116062_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43532340	43532603	.	+	.	ID=comp116062_c0_seq1.mrna1;geneID=comp116062_c0_seq1.path1;Name=comp116062_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=264;mismatches=0;indels=0;unknowns=0;Target=comp116062_c0_seq1 264 1 .;CDS_Target=comp116062_c0_seq1 119 3 .;locus=RLOC_00002541
ChrX	stalkie_big_nohaplotig	exon	43532340	43532603	100	+	.	Parent=comp116062_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	43532342	43532458	.	+	0	Parent=comp116062_c0_seq1.mrna1
ChrX	gffcl	locus	43543358	43554218	.	-	.	ID=RLOC_00002542;geneIDs=FBgn0031257.1.path1;transcripts=FBgn0031257.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43543358	43554218	.	-	.	ID=FBgn0031257.1.mrna1;geneID=FBgn0031257.1.path1;Name=FBgn0031257.1;Dir=sensecoverage=100.0;identity=99.6;matches=1590;mismatches=6;indels=0;unknowns=0;locus=RLOC_00002542
ChrX	stalkie_big_nohaplotig	exon	43543358	43543973	99	-	.	Parent=FBgn0031257.1.mrna1;Target=FBgn0031257.1 981 1596 +
ChrX	stalkie_big_nohaplotig	exon	43544783	43544945	100	-	.	Parent=FBgn0031257.1.mrna1;Target=FBgn0031257.1 818 980 +
ChrX	stalkie_big_nohaplotig	exon	43546563	43546754	99	-	.	Parent=FBgn0031257.1.mrna1;Target=FBgn0031257.1 626 817 +
ChrX	stalkie_big_nohaplotig	exon	43546825	43546910	100	-	.	Parent=FBgn0031257.1.mrna1;Target=FBgn0031257.1 540 625 +
ChrX	stalkie_big_nohaplotig	exon	43549792	43549985	98	-	.	Parent=FBgn0031257.1.mrna1;Target=FBgn0031257.1 346 539 +
ChrX	stalkie_big_nohaplotig	exon	43551355	43551534	100	-	.	Parent=FBgn0031257.1.mrna1;Target=FBgn0031257.1 166 345 +
ChrX	stalkie_big_nohaplotig	exon	43551606	43551743	100	-	.	Parent=FBgn0031257.1.mrna1;Target=FBgn0031257.1 28 165 +
ChrX	stalkie_big_nohaplotig	exon	43554192	43554218	100	-	.	Parent=FBgn0031257.1.mrna1;Target=FBgn0031257.1 1 27 +
ChrX	stalkie_big_nohaplotig	CDS	43543358	43543973	.	-	1	Parent=FBgn0031257.1.mrna1;Target=FBgn0031257.1 981 1596 +
ChrX	stalkie_big_nohaplotig	CDS	43544783	43544945	.	-	2	Parent=FBgn0031257.1.mrna1;Target=FBgn0031257.1 818 980 +
ChrX	stalkie_big_nohaplotig	CDS	43546563	43546754	.	-	2	Parent=FBgn0031257.1.mrna1;Target=FBgn0031257.1 626 817 +
ChrX	stalkie_big_nohaplotig	CDS	43546825	43546910	.	-	1	Parent=FBgn0031257.1.mrna1;Target=FBgn0031257.1 540 625 +
ChrX	stalkie_big_nohaplotig	CDS	43549792	43549985	.	-	0	Parent=FBgn0031257.1.mrna1;Target=FBgn0031257.1 346 539 +
ChrX	stalkie_big_nohaplotig	CDS	43551355	43551534	.	-	0	Parent=FBgn0031257.1.mrna1;Target=FBgn0031257.1 166 345 +
ChrX	stalkie_big_nohaplotig	CDS	43551606	43551743	.	-	0	Parent=FBgn0031257.1.mrna1;Target=FBgn0031257.1 28 165 +
ChrX	stalkie_big_nohaplotig	CDS	43554192	43554218	.	-	0	Parent=FBgn0031257.1.mrna1;Target=FBgn0031257.1 1 27 +
ChrX	gffcl	locus	43547404	43548555	.	+	.	ID=RLOC_00002543;geneIDs=comp157862_c1_seq1.path1;transcripts=comp157862_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43547404	43548555	.	+	.	ID=comp157862_c1_seq1.mrna1;geneID=comp157862_c1_seq1.path1;Name=comp157862_c1_seq1;Dir=sensecoverage=96.8;identity=96.0;matches=1002;mismatches=18;indels=24;unknowns=0;Target=comp157862_c1_seq1 14 283 +;locus=RLOC_00002543
ChrX	stalkie_big_nohaplotig	exon	43547404	43547931	94	+	.	Parent=comp157862_c1_seq1.mrna1;Target=comp157862_c1_seq1 14 565 +
ChrX	stalkie_big_nohaplotig	exon	43548011	43548150	97	+	.	Parent=comp157862_c1_seq1.mrna1;Target=comp157862_c1_seq1 566 705 +
ChrX	stalkie_big_nohaplotig	exon	43548204	43548555	97	+	.	Parent=comp157862_c1_seq1.mrna1;Target=comp157862_c1_seq1 706 1057 +
ChrX	stalkie_big_nohaplotig	CDS	43547404	43547673	.	+	0	Parent=comp157862_c1_seq1.mrna1
ChrX	gffcl	locus	43557523	43560161	.	+	.	ID=RLOC_00002544;geneIDs=FBgn0031256.1.path1;transcripts=FBgn0031256.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43557523	43560161	.	+	.	ID=FBgn0031256.1.mrna1;geneID=FBgn0031256.1.path1;Name=FBgn0031256.1;Dir=sensecoverage=100.0;identity=100.0;matches=1101;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002544
ChrX	stalkie_big_nohaplotig	exon	43557523	43558359	100	+	.	Parent=FBgn0031256.1.mrna1;Target=FBgn0031256.1 1 837 +
ChrX	stalkie_big_nohaplotig	exon	43558418	43558628	100	+	.	Parent=FBgn0031256.1.mrna1;Target=FBgn0031256.1 838 1048 +
ChrX	stalkie_big_nohaplotig	exon	43560109	43560161	100	+	.	Parent=FBgn0031256.1.mrna1;Target=FBgn0031256.1 1049 1101 +
ChrX	stalkie_big_nohaplotig	CDS	43557523	43558359	.	+	0	Parent=FBgn0031256.1.mrna1;Target=FBgn0031256.1 1 837 +
ChrX	stalkie_big_nohaplotig	CDS	43558418	43558628	.	+	0	Parent=FBgn0031256.1.mrna1;Target=FBgn0031256.1 838 1048 +
ChrX	stalkie_big_nohaplotig	CDS	43560109	43560161	.	+	2	Parent=FBgn0031256.1.mrna1;Target=FBgn0031256.1 1049 1101 +
ChrX	gffcl	locus	43563094	43568138	.	-	.	ID=RLOC_00002545;geneIDs=FBgn0027592.1.path1;transcripts=FBgn0027592.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43563094	43568138	.	-	.	ID=FBgn0027592.1.mrna1;geneID=FBgn0027592.1.path1;Name=FBgn0027592.1;Dir=sensecoverage=100.0;identity=100.0;matches=2235;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002545
ChrX	stalkie_big_nohaplotig	exon	43563094	43563320	100	-	.	Parent=FBgn0027592.1.mrna1;Target=FBgn0027592.1 2009 2235 +
ChrX	stalkie_big_nohaplotig	exon	43565335	43565555	100	-	.	Parent=FBgn0027592.1.mrna1;Target=FBgn0027592.1 1788 2008 +
ChrX	stalkie_big_nohaplotig	exon	43565622	43565740	100	-	.	Parent=FBgn0027592.1.mrna1;Target=FBgn0027592.1 1669 1787 +
ChrX	stalkie_big_nohaplotig	exon	43565806	43565948	100	-	.	Parent=FBgn0027592.1.mrna1;Target=FBgn0027592.1 1526 1668 +
ChrX	stalkie_big_nohaplotig	exon	43566019	43566498	100	-	.	Parent=FBgn0027592.1.mrna1;Target=FBgn0027592.1 1046 1525 +
ChrX	stalkie_big_nohaplotig	exon	43566688	43566904	100	-	.	Parent=FBgn0027592.1.mrna1;Target=FBgn0027592.1 829 1045 +
ChrX	stalkie_big_nohaplotig	exon	43567181	43567803	100	-	.	Parent=FBgn0027592.1.mrna1;Target=FBgn0027592.1 206 828 +
ChrX	stalkie_big_nohaplotig	exon	43567868	43568013	100	-	.	Parent=FBgn0027592.1.mrna1;Target=FBgn0027592.1 60 205 +
ChrX	stalkie_big_nohaplotig	exon	43568080	43568138	100	-	.	Parent=FBgn0027592.1.mrna1;Target=FBgn0027592.1 1 59 +
ChrX	stalkie_big_nohaplotig	CDS	43563094	43563320	.	-	2	Parent=FBgn0027592.1.mrna1;Target=FBgn0027592.1 2009 2235 +
ChrX	stalkie_big_nohaplotig	CDS	43565335	43565555	.	-	1	Parent=FBgn0027592.1.mrna1;Target=FBgn0027592.1 1788 2008 +
ChrX	stalkie_big_nohaplotig	CDS	43565622	43565740	.	-	0	Parent=FBgn0027592.1.mrna1;Target=FBgn0027592.1 1669 1787 +
ChrX	stalkie_big_nohaplotig	CDS	43565806	43565948	.	-	2	Parent=FBgn0027592.1.mrna1;Target=FBgn0027592.1 1526 1668 +
ChrX	stalkie_big_nohaplotig	CDS	43566019	43566498	.	-	2	Parent=FBgn0027592.1.mrna1;Target=FBgn0027592.1 1046 1525 +
ChrX	stalkie_big_nohaplotig	CDS	43566688	43566904	.	-	0	Parent=FBgn0027592.1.mrna1;Target=FBgn0027592.1 829 1045 +
ChrX	stalkie_big_nohaplotig	CDS	43567181	43567803	.	-	2	Parent=FBgn0027592.1.mrna1;Target=FBgn0027592.1 206 828 +
ChrX	stalkie_big_nohaplotig	CDS	43567868	43568013	.	-	1	Parent=FBgn0027592.1.mrna1;Target=FBgn0027592.1 60 205 +
ChrX	stalkie_big_nohaplotig	CDS	43568080	43568138	.	-	0	Parent=FBgn0027592.1.mrna1;Target=FBgn0027592.1 1 59 +
ChrX	gffcl	locus	43563785	43565356	.	+	.	ID=RLOC_00002546;geneIDs=comp142862_c0_seq1.path1;transcripts=comp142862_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43563785	43565356	.	+	.	ID=comp142862_c0_seq1.mrna1;geneID=comp142862_c0_seq1.path1;Name=comp142862_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=738;mismatches=4;indels=0;unknowns=0;Target=comp142862_c0_seq1 411 319 .;locus=RLOC_00002546
ChrX	stalkie_big_nohaplotig	exon	43563785	43564504	99	+	.	Parent=comp142862_c0_seq1.mrna1;Target=comp142862_c0_seq1 720 1 .
ChrX	stalkie_big_nohaplotig	exon	43565335	43565356	100	+	.	Parent=comp142862_c0_seq1.mrna1;Target=comp142862_c0_seq1 742 721 .
ChrX	stalkie_big_nohaplotig	CDS	43564103	43564195	.	+	0	Parent=comp142862_c0_seq1.mrna1
ChrX	gffcl	locus	43578427	43583513	.	+	.	ID=RLOC_00002547;geneIDs=FBgn0262619.1.path1;transcripts=FBgn0262619.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43578427	43583513	.	+	.	ID=FBgn0262619.1.mrna1;geneID=FBgn0262619.1.path1;Name=FBgn0262619.1;Dir=sensecoverage=100.0;identity=100.0;matches=2361;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002547
ChrX	stalkie_big_nohaplotig	exon	43578427	43578602	100	+	.	Parent=FBgn0262619.1.mrna1;Target=FBgn0262619.1 1 176 +
ChrX	stalkie_big_nohaplotig	exon	43578663	43578713	100	+	.	Parent=FBgn0262619.1.mrna1;Target=FBgn0262619.1 177 227 +
ChrX	stalkie_big_nohaplotig	exon	43579055	43579318	100	+	.	Parent=FBgn0262619.1.mrna1;Target=FBgn0262619.1 228 491 +
ChrX	stalkie_big_nohaplotig	exon	43580483	43580655	100	+	.	Parent=FBgn0262619.1.mrna1;Target=FBgn0262619.1 492 664 +
ChrX	stalkie_big_nohaplotig	exon	43580725	43581184	100	+	.	Parent=FBgn0262619.1.mrna1;Target=FBgn0262619.1 665 1124 +
ChrX	stalkie_big_nohaplotig	exon	43582220	43582845	100	+	.	Parent=FBgn0262619.1.mrna1;Target=FBgn0262619.1 1125 1750 +
ChrX	stalkie_big_nohaplotig	exon	43582903	43583513	100	+	.	Parent=FBgn0262619.1.mrna1;Target=FBgn0262619.1 1751 2361 +
ChrX	stalkie_big_nohaplotig	CDS	43578427	43578602	.	+	0	Parent=FBgn0262619.1.mrna1;Target=FBgn0262619.1 1 176 +
ChrX	stalkie_big_nohaplotig	CDS	43578663	43578713	.	+	1	Parent=FBgn0262619.1.mrna1;Target=FBgn0262619.1 177 227 +
ChrX	stalkie_big_nohaplotig	CDS	43579055	43579318	.	+	1	Parent=FBgn0262619.1.mrna1;Target=FBgn0262619.1 228 491 +
ChrX	stalkie_big_nohaplotig	CDS	43580483	43580655	.	+	1	Parent=FBgn0262619.1.mrna1;Target=FBgn0262619.1 492 664 +
ChrX	stalkie_big_nohaplotig	CDS	43580725	43581184	.	+	2	Parent=FBgn0262619.1.mrna1;Target=FBgn0262619.1 665 1124 +
ChrX	stalkie_big_nohaplotig	CDS	43582220	43582845	.	+	1	Parent=FBgn0262619.1.mrna1;Target=FBgn0262619.1 1125 1750 +
ChrX	stalkie_big_nohaplotig	CDS	43582903	43583513	.	+	2	Parent=FBgn0262619.1.mrna1;Target=FBgn0262619.1 1751 2361 +
ChrX	gffcl	locus	43600715	43601690	.	+	.	ID=RLOC_00002548;geneIDs=FBgn0043364.1.path1;transcripts=FBgn0043364.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43600715	43601690	.	+	.	ID=FBgn0043364.1.mrna1;geneID=FBgn0043364.1.path1;Name=FBgn0043364.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=976;mismatches=0;indels=2;unknowns=0;Target=FBgn0043364.1 978 1 .;CDS_Target=FBgn0043364.1 167 3 .;locus=RLOC_00002548
ChrX	stalkie_big_nohaplotig	exon	43600715	43601690	99	+	.	Parent=FBgn0043364.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	43600717	43600880	.	+	0	Parent=FBgn0043364.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43631568	45517316	.	+	.	ID=comp147589_c0_seq1.mrna8;geneID=comp147589_c0_seq1.path8;Name=comp147589_c0_seq1;Dir=indeterminatecoverage=95.1;identity=96.6;matches=1040;mismatches=20;indels=17;unknowns=0;Target=comp147589_c0_seq1 874 2 .;locus=RLOC_00002549
ChrX	stalkie_big_nohaplotig	exon	43631568	43632558	99	+	.	Parent=comp147589_c0_seq1.mrna8;Target=comp147589_c0_seq1 991 1 .
ChrX	stalkie_big_nohaplotig	exon	45494144	45494147	100	+	.	Parent=comp147589_c0_seq1.mrna8;Target=comp147589_c0_seq1 995 992 .
ChrX	stalkie_big_nohaplotig	exon	45500267	45500294	44	+	.	Parent=comp147589_c0_seq1.mrna8;Target=comp147589_c0_seq1 1040 996 .
ChrX	stalkie_big_nohaplotig	exon	45505795	45505803	100	+	.	Parent=comp147589_c0_seq1.mrna8;Target=comp147589_c0_seq1 1049 1041 .
ChrX	stalkie_big_nohaplotig	exon	45506045	45506054	90	+	.	Parent=comp147589_c0_seq1.mrna8;Target=comp147589_c0_seq1 1059 1050 .
ChrX	stalkie_big_nohaplotig	exon	45509954	45509967	78	+	.	Parent=comp147589_c0_seq1.mrna8;Target=comp147589_c0_seq1 1073 1060 .
ChrX	stalkie_big_nohaplotig	exon	45517313	45517316	100	+	.	Parent=comp147589_c0_seq1.mrna8;Target=comp147589_c0_seq1 1077 1074 .
ChrX	stalkie_big_nohaplotig	CDS	43631569	43632441	.	+	0	Parent=comp147589_c0_seq1.mrna8
ChrX	gffcl	locus	43642149	43642183	.	+	.	ID=RLOC_00002550;geneIDs=comp134699_c0_seq1.path2;transcripts=comp134699_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	43642149	43642183	.	+	.	ID=comp134699_c0_seq1.mrna2;geneID=comp134699_c0_seq1.path2;Name=comp134699_c0_seq1;Dir=indeterminatecoverage=8.1;identity=97.1;matches=34;mismatches=1;indels=0;unknowns=0;Target=comp134699_c0_seq1 426 392 .;locus=RLOC_00002550
ChrX	stalkie_big_nohaplotig	exon	43642149	43642183	97	+	.	Parent=comp134699_c0_seq1.mrna2
ChrX	gffcl	locus	43669894	43670309	.	-	.	ID=RLOC_00002551;geneIDs=comp991654_c0_seq1.path1;transcripts=comp991654_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43669894	43670309	.	-	.	ID=comp991654_c0_seq1.mrna1;geneID=comp991654_c0_seq1.path1;Name=comp991654_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=416;mismatches=0;indels=0;unknowns=0;Target=comp991654_c0_seq1 416 1 .;CDS_Target=comp991654_c0_seq1 415 221 .;locus=RLOC_00002551
ChrX	stalkie_big_nohaplotig	exon	43669894	43670309	100	-	.	Parent=comp991654_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	43669895	43670089	.	-	0	Parent=comp991654_c0_seq1.mrna1
ChrX	gffcl	locus	43684018	43684903	.	-	.	ID=RLOC_00002552;geneIDs=FBgn0033669.5.path1;transcripts=FBgn0033669.5.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43684018	43684903	.	-	.	ID=FBgn0033669.5.mrna1;geneID=FBgn0033669.5.path1;Name=FBgn0033669.5;Dir=sensecoverage=100.0;identity=100.0;matches=687;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002552
ChrX	stalkie_big_nohaplotig	exon	43684018	43684188	100	-	.	Parent=FBgn0033669.5.mrna1;Target=FBgn0033669.5 517 687 +
ChrX	stalkie_big_nohaplotig	exon	43684243	43684536	100	-	.	Parent=FBgn0033669.5.mrna1;Target=FBgn0033669.5 223 516 +
ChrX	stalkie_big_nohaplotig	exon	43684610	43684663	100	-	.	Parent=FBgn0033669.5.mrna1;Target=FBgn0033669.5 169 222 +
ChrX	stalkie_big_nohaplotig	exon	43684736	43684903	100	-	.	Parent=FBgn0033669.5.mrna1;Target=FBgn0033669.5 1 168 +
ChrX	stalkie_big_nohaplotig	CDS	43684018	43684188	.	-	0	Parent=FBgn0033669.5.mrna1;Target=FBgn0033669.5 517 687 +
ChrX	stalkie_big_nohaplotig	CDS	43684243	43684536	.	-	0	Parent=FBgn0033669.5.mrna1;Target=FBgn0033669.5 223 516 +
ChrX	stalkie_big_nohaplotig	CDS	43684610	43684663	.	-	0	Parent=FBgn0033669.5.mrna1;Target=FBgn0033669.5 169 222 +
ChrX	stalkie_big_nohaplotig	CDS	43684736	43684903	.	-	0	Parent=FBgn0033669.5.mrna1;Target=FBgn0033669.5 1 168 +
ChrX	gffcl	locus	43687580	43688424	.	-	.	ID=RLOC_00002553;geneIDs=comp146541_c0_seq1.path1;transcripts=comp146541_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43687580	43688424	.	-	.	ID=comp146541_c0_seq1.mrna1;geneID=comp146541_c0_seq1.path1;Name=comp146541_c0_seq1;Dir=antisensecoverage=79.2;identity=99.7;matches=732;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002553
ChrX	stalkie_big_nohaplotig	exon	43687580	43687872	99	-	.	Parent=comp146541_c0_seq1.mrna1;Target=comp146541_c0_seq1 1 293 -
ChrX	stalkie_big_nohaplotig	exon	43687931	43688201	100	-	.	Parent=comp146541_c0_seq1.mrna1;Target=comp146541_c0_seq1 294 564 -
ChrX	stalkie_big_nohaplotig	exon	43688255	43688424	100	-	.	Parent=comp146541_c0_seq1.mrna1;Target=comp146541_c0_seq1 565 734 -
ChrX	stalkie_big_nohaplotig	CDS	43687777	43687872	.	-	0	Parent=comp146541_c0_seq1.mrna1;Target=comp146541_c0_seq1 198 293 .
ChrX	stalkie_big_nohaplotig	CDS	43687931	43688201	.	-	1	Parent=comp146541_c0_seq1.mrna1;Target=comp146541_c0_seq1 294 564 .
ChrX	stalkie_big_nohaplotig	CDS	43688255	43688298	.	-	0	Parent=comp146541_c0_seq1.mrna1;Target=comp146541_c0_seq1 565 608 .
ChrX	gffcl	locus	43713221	43758358	.	+	.	ID=RLOC_00002554;geneIDs=FBgn0003963.1.path1,comp162647_c0_seq1.path1;transcripts=FBgn0003963.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43713221	43757491	.	+	.	ID=FBgn0003963.1.mrna1;geneID=FBgn0003963.1.path1;Name=FBgn0003963.1;Dir=sensecoverage=100.0;identity=100.0;matches=3794;mismatches=0;indels=1;unknowns=0;locus=RLOC_00002554
ChrX	stalkie_big_nohaplotig	exon	43713221	43713292	98	+	.	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 1 73 +
ChrX	stalkie_big_nohaplotig	exon	43732262	43732306	100	+	.	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 74 118 +
ChrX	stalkie_big_nohaplotig	exon	43751256	43751952	100	+	.	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 119 815 +
ChrX	stalkie_big_nohaplotig	exon	43752023	43752323	100	+	.	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 816 1116 +
ChrX	stalkie_big_nohaplotig	exon	43752415	43752515	100	+	.	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 1117 1217 +
ChrX	stalkie_big_nohaplotig	exon	43752581	43752817	100	+	.	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 1218 1454 +
ChrX	stalkie_big_nohaplotig	exon	43752870	43753127	100	+	.	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 1455 1712 +
ChrX	stalkie_big_nohaplotig	exon	43753195	43754122	100	+	.	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 1713 2640 +
ChrX	stalkie_big_nohaplotig	exon	43754187	43754458	100	+	.	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 2641 2912 +
ChrX	stalkie_big_nohaplotig	exon	43756456	43756660	100	+	.	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 2913 3117 +
ChrX	stalkie_big_nohaplotig	exon	43756748	43756884	100	+	.	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 3118 3254 +
ChrX	stalkie_big_nohaplotig	exon	43756951	43757491	100	+	.	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 3255 3795 +
ChrX	stalkie_big_nohaplotig	CDS	43713283	43713292	.	+	0	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 64 73 +
ChrX	stalkie_big_nohaplotig	CDS	43732262	43732306	.	+	2	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 74 118 +
ChrX	stalkie_big_nohaplotig	CDS	43751256	43751952	.	+	2	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 119 815 +
ChrX	stalkie_big_nohaplotig	CDS	43752023	43752323	.	+	1	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 816 1116 +
ChrX	stalkie_big_nohaplotig	CDS	43752415	43752515	.	+	0	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 1117 1217 +
ChrX	stalkie_big_nohaplotig	CDS	43752581	43752817	.	+	1	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 1218 1454 +
ChrX	stalkie_big_nohaplotig	CDS	43752870	43753127	.	+	1	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 1455 1712 +
ChrX	stalkie_big_nohaplotig	CDS	43753195	43754122	.	+	1	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 1713 2640 +
ChrX	stalkie_big_nohaplotig	CDS	43754187	43754458	.	+	0	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 2641 2912 +
ChrX	stalkie_big_nohaplotig	CDS	43756456	43756660	.	+	1	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 2913 3117 +
ChrX	stalkie_big_nohaplotig	CDS	43756748	43756884	.	+	0	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 3118 3254 +
ChrX	stalkie_big_nohaplotig	CDS	43756951	43757491	.	+	1	Parent=FBgn0003963.1.mrna1;Target=FBgn0003963.1 3255 3795 +
ChrX	gffcl	locus	43759148	43759464	.	+	.	ID=RLOC_00002555;geneIDs=comp144101_c1_seq1.path1;transcripts=comp144101_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43759148	43759464	.	+	.	ID=comp144101_c1_seq1.mrna1;geneID=comp144101_c1_seq1.path1;Name=comp144101_c1_seq1;Dir=indeterminatecoverage=82.1;identity=99.1;matches=314;mismatches=3;indels=0;unknowns=0;Target=comp144101_c1_seq1 317 1 .;CDS_Target=comp144101_c1_seq1 128 3 .;locus=RLOC_00002555
ChrX	stalkie_big_nohaplotig	exon	43759148	43759464	99	+	.	Parent=comp144101_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	43759150	43759275	.	+	0	Parent=comp144101_c1_seq1.mrna1
ChrX	gffcl	locus	43760064	43760589	.	-	.	ID=RLOC_00002556;geneIDs=comp147705_c0_seq1.path1;transcripts=comp147705_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43760064	43760589	.	-	.	ID=comp147705_c0_seq1.mrna1;geneID=comp147705_c0_seq1.path1;Name=comp147705_c0_seq1;Dir=indeterminatecoverage=98.7;identity=94.8;matches=514;mismatches=12;indels=16;unknowns=0;Target=comp147705_c0_seq1 542 1 .;CDS_Target=comp147705_c0_seq1 29 3 .;locus=RLOC_00002556
ChrX	stalkie_big_nohaplotig	exon	43760064	43760589	94	-	.	Parent=comp147705_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	43760561	43760587	.	-	0	Parent=comp147705_c0_seq1.mrna1
ChrX	gffcl	locus	43767260	43768102	.	-	.	ID=RLOC_00002557;geneIDs=FBgn0010602.2.path1;transcripts=FBgn0010602.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43767260	43768102	.	-	.	ID=FBgn0010602.2.mrna1;geneID=FBgn0010602.2.path1;Name=FBgn0010602.2;Dir=sensecoverage=100.0;identity=100.0;matches=492;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002557
ChrX	stalkie_big_nohaplotig	exon	43767260	43767656	100	-	.	Parent=FBgn0010602.2.mrna1;Target=FBgn0010602.2 96 492 +
ChrX	stalkie_big_nohaplotig	exon	43768008	43768102	100	-	.	Parent=FBgn0010602.2.mrna1;Target=FBgn0010602.2 1 95 +
ChrX	stalkie_big_nohaplotig	CDS	43767260	43767656	.	-	1	Parent=FBgn0010602.2.mrna1;Target=FBgn0010602.2 96 492 +
ChrX	stalkie_big_nohaplotig	CDS	43768008	43768102	.	-	0	Parent=FBgn0010602.2.mrna1;Target=FBgn0010602.2 1 95 +
ChrX	gffcl	locus	43770352	43809146	.	+	.	ID=RLOC_00002558;geneIDs=FBgn0261671.1.path1,comp163842_c0_seq1.path1;transcripts=comp163842_c0_seq1.mrna1,FBgn0261671.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43770352	43809146	.	+	.	ID=comp163842_c0_seq1.mrna1;geneID=comp163842_c0_seq1.path1;Name=comp163842_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=16364;mismatches=1;indels=9;unknowns=0;locus=RLOC_00002558
ChrX	stalkie_big_nohaplotig	exon	43770352	43770544	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 16180 16372 -
ChrX	stalkie_big_nohaplotig	exon	43770689	43770929	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 15939 16179 -
ChrX	stalkie_big_nohaplotig	exon	43778852	43778987	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 15803 15938 -
ChrX	stalkie_big_nohaplotig	exon	43779070	43779213	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 15659 15802 -
ChrX	stalkie_big_nohaplotig	exon	43779272	43779399	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 15531 15658 -
ChrX	stalkie_big_nohaplotig	exon	43779455	43780887	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 14098 15530 -
ChrX	stalkie_big_nohaplotig	exon	43780955	43781708	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 13344 14097 -
ChrX	stalkie_big_nohaplotig	exon	43782214	43782582	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 12975 13343 -
ChrX	stalkie_big_nohaplotig	exon	43782648	43783096	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 12526 12974 -
ChrX	stalkie_big_nohaplotig	exon	43783151	43783351	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 12325 12525 -
ChrX	stalkie_big_nohaplotig	exon	43783639	43783765	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 12198 12324 -
ChrX	stalkie_big_nohaplotig	exon	43783835	43784043	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 11989 12197 -
ChrX	stalkie_big_nohaplotig	exon	43784108	43784321	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 11775 11988 -
ChrX	stalkie_big_nohaplotig	exon	43784394	43784674	99	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 11493 11774 -
ChrX	stalkie_big_nohaplotig	exon	43786185	43786305	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 11372 11492 -
ChrX	stalkie_big_nohaplotig	exon	43790288	43791036	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 10623 11371 -
ChrX	stalkie_big_nohaplotig	exon	43793799	43793937	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 10484 10622 -
ChrX	stalkie_big_nohaplotig	exon	43793996	43794193	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 10286 10483 -
ChrX	stalkie_big_nohaplotig	exon	43794298	43795250	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 9333 10285 -
ChrX	stalkie_big_nohaplotig	exon	43795309	43795498	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 9143 9332 -
ChrX	stalkie_big_nohaplotig	exon	43795563	43795727	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 8978 9142 -
ChrX	stalkie_big_nohaplotig	exon	43795786	43796038	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 8725 8977 -
ChrX	stalkie_big_nohaplotig	exon	43796879	43796981	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 8622 8724 -
ChrX	stalkie_big_nohaplotig	exon	43797059	43797168	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 8512 8621 -
ChrX	stalkie_big_nohaplotig	exon	43798952	43799263	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 8200 8511 -
ChrX	stalkie_big_nohaplotig	exon	43799321	43799655	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 7865 8199 -
ChrX	stalkie_big_nohaplotig	exon	43799714	43799846	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 7732 7864 -
ChrX	stalkie_big_nohaplotig	exon	43799913	43800033	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 7611 7731 -
ChrX	stalkie_big_nohaplotig	exon	43800099	43800223	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 7486 7610 -
ChrX	stalkie_big_nohaplotig	exon	43800316	43800732	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 7069 7485 -
ChrX	stalkie_big_nohaplotig	exon	43800805	43801039	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 6834 7068 -
ChrX	stalkie_big_nohaplotig	exon	43801098	43801653	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 6278 6833 -
ChrX	stalkie_big_nohaplotig	exon	43801719	43801811	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 6185 6277 -
ChrX	stalkie_big_nohaplotig	exon	43801890	43802606	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 5468 6184 -
ChrX	stalkie_big_nohaplotig	exon	43802668	43802790	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 5345 5467 -
ChrX	stalkie_big_nohaplotig	exon	43802846	43803919	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 4271 5344 -
ChrX	stalkie_big_nohaplotig	exon	43804065	43804864	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 3471 4270 -
ChrX	stalkie_big_nohaplotig	exon	43804926	43806048	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 2348 3470 -
ChrX	stalkie_big_nohaplotig	exon	43806109	43806748	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 1708 2347 -
ChrX	stalkie_big_nohaplotig	exon	43806810	43807016	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 1501 1707 -
ChrX	stalkie_big_nohaplotig	exon	43807077	43807207	100	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 1370 1500 -
ChrX	stalkie_big_nohaplotig	exon	43807779	43809146	99	+	.	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 4 1369 -
ChrX	stalkie_big_nohaplotig	CDS	43790450	43791036	.	+	0	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 10623 11209 .
ChrX	stalkie_big_nohaplotig	CDS	43793799	43793937	.	+	1	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 10484 10622 .
ChrX	stalkie_big_nohaplotig	CDS	43793996	43794193	.	+	0	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 10286 10483 .
ChrX	stalkie_big_nohaplotig	CDS	43794298	43795250	.	+	0	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 9333 10285 .
ChrX	stalkie_big_nohaplotig	CDS	43795309	43795498	.	+	1	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 9143 9332 .
ChrX	stalkie_big_nohaplotig	CDS	43795563	43795727	.	+	0	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 8978 9142 .
ChrX	stalkie_big_nohaplotig	CDS	43795786	43796038	.	+	0	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 8725 8977 .
ChrX	stalkie_big_nohaplotig	CDS	43796879	43796981	.	+	2	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 8622 8724 .
ChrX	stalkie_big_nohaplotig	CDS	43797059	43797168	.	+	1	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 8512 8621 .
ChrX	stalkie_big_nohaplotig	CDS	43798952	43799263	.	+	2	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 8200 8511 .
ChrX	stalkie_big_nohaplotig	CDS	43799321	43799655	.	+	2	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 7865 8199 .
ChrX	stalkie_big_nohaplotig	CDS	43799714	43799846	.	+	0	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 7732 7864 .
ChrX	stalkie_big_nohaplotig	CDS	43799913	43800033	.	+	2	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 7611 7731 .
ChrX	stalkie_big_nohaplotig	CDS	43800099	43800223	.	+	1	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 7486 7610 .
ChrX	stalkie_big_nohaplotig	CDS	43800316	43800732	.	+	2	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 7069 7485 .
ChrX	stalkie_big_nohaplotig	CDS	43800805	43801039	.	+	2	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 6834 7068 .
ChrX	stalkie_big_nohaplotig	CDS	43801098	43801653	.	+	1	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 6278 6833 .
ChrX	stalkie_big_nohaplotig	CDS	43801719	43801811	.	+	0	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 6185 6277 .
ChrX	stalkie_big_nohaplotig	CDS	43801890	43802606	.	+	0	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 5468 6184 .
ChrX	stalkie_big_nohaplotig	CDS	43802668	43802790	.	+	0	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 5345 5467 .
ChrX	stalkie_big_nohaplotig	CDS	43802846	43803919	.	+	0	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 4271 5344 .
ChrX	stalkie_big_nohaplotig	CDS	43804065	43804864	.	+	0	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 3471 4270 .
ChrX	stalkie_big_nohaplotig	CDS	43804926	43806048	.	+	1	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 2348 3470 .
ChrX	stalkie_big_nohaplotig	CDS	43806109	43806748	.	+	0	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 1708 2347 .
ChrX	stalkie_big_nohaplotig	CDS	43806810	43807016	.	+	2	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 1501 1707 .
ChrX	stalkie_big_nohaplotig	CDS	43807077	43807207	.	+	2	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 1370 1500 .
ChrX	stalkie_big_nohaplotig	CDS	43807779	43808507	.	+	0	Parent=comp163842_c0_seq1.mrna1;Target=comp163842_c0_seq1 641 1369 .
ChrX	stalkie_big_nohaplotig	mRNA	43784617	43808504	.	+	.	ID=FBgn0261671.1.mrna1;geneID=FBgn0261671.1.path1;Name=FBgn0261671.1;Dir=sensecoverage=100.0;identity=100.0;matches=10736;mismatches=0;indels=1;unknowns=0;Target=FBgn0261671.1 3 53 +;locus=RLOC_00002558
ChrX	stalkie_big_nohaplotig	exon	43784617	43784674	98	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 1 59 +
ChrX	stalkie_big_nohaplotig	exon	43786185	43786305	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 60 180 +
ChrX	stalkie_big_nohaplotig	exon	43790459	43791036	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 181 758 +
ChrX	stalkie_big_nohaplotig	exon	43793799	43793937	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 759 897 +
ChrX	stalkie_big_nohaplotig	exon	43793996	43794193	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 898 1095 +
ChrX	stalkie_big_nohaplotig	exon	43794298	43795250	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 1096 2048 +
ChrX	stalkie_big_nohaplotig	exon	43795309	43795498	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 2049 2238 +
ChrX	stalkie_big_nohaplotig	exon	43795563	43795727	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 2239 2403 +
ChrX	stalkie_big_nohaplotig	exon	43795786	43796038	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 2404 2656 +
ChrX	stalkie_big_nohaplotig	exon	43796879	43796981	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 2657 2759 +
ChrX	stalkie_big_nohaplotig	exon	43797059	43797168	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 2760 2869 +
ChrX	stalkie_big_nohaplotig	exon	43798952	43799263	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 2870 3181 +
ChrX	stalkie_big_nohaplotig	exon	43799321	43799655	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 3182 3516 +
ChrX	stalkie_big_nohaplotig	exon	43799714	43799846	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 3517 3649 +
ChrX	stalkie_big_nohaplotig	exon	43799913	43800033	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 3650 3770 +
ChrX	stalkie_big_nohaplotig	exon	43800099	43800223	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 3771 3895 +
ChrX	stalkie_big_nohaplotig	exon	43800316	43800732	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 3896 4312 +
ChrX	stalkie_big_nohaplotig	exon	43800805	43801039	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 4313 4547 +
ChrX	stalkie_big_nohaplotig	exon	43801098	43801653	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 4548 5103 +
ChrX	stalkie_big_nohaplotig	exon	43801719	43801811	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 5104 5196 +
ChrX	stalkie_big_nohaplotig	exon	43801890	43802606	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 5197 5913 +
ChrX	stalkie_big_nohaplotig	exon	43802668	43802790	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 5914 6036 +
ChrX	stalkie_big_nohaplotig	exon	43802846	43803919	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 6037 7110 +
ChrX	stalkie_big_nohaplotig	exon	43804065	43804864	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 7111 7910 +
ChrX	stalkie_big_nohaplotig	exon	43804926	43806048	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 7911 9033 +
ChrX	stalkie_big_nohaplotig	exon	43806109	43806748	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 9034 9673 +
ChrX	stalkie_big_nohaplotig	exon	43806810	43807016	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 9674 9880 +
ChrX	stalkie_big_nohaplotig	exon	43807077	43807207	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 9881 10011 +
ChrX	stalkie_big_nohaplotig	exon	43807779	43808504	100	+	.	Parent=FBgn0261671.1.mrna1;Target=FBgn0261671.1 10012 10737 +
ChrX	stalkie_big_nohaplotig	CDS	43784619	43784668	.	+	0	Parent=FBgn0261671.1.mrna1
ChrX	gffcl	locus	43921171	44856548	.	-	.	ID=RLOC_00002559;geneIDs=comp142896_c0_seq1.path1,comp142896_c0_seq1.path2;transcripts=comp142896_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43921171	44856548	.	-	.	ID=comp142896_c0_seq1.mrna1;geneID=comp142896_c0_seq1.path1;Name=comp142896_c0_seq1;Dir=antisensecoverage=59.0;identity=100.0;matches=766;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002559
ChrX	stalkie_big_nohaplotig	exon	43921171	43921457	100	-	.	Parent=comp142896_c0_seq1.mrna1;Target=comp142896_c0_seq1 16 302 -
ChrX	stalkie_big_nohaplotig	exon	43921513	43921768	100	-	.	Parent=comp142896_c0_seq1.mrna1;Target=comp142896_c0_seq1 303 558 -
ChrX	stalkie_big_nohaplotig	exon	43921833	43922000	100	-	.	Parent=comp142896_c0_seq1.mrna1;Target=comp142896_c0_seq1 559 726 -
ChrX	stalkie_big_nohaplotig	exon	44814051	44814058	100	-	.	Parent=comp142896_c0_seq1.mrna1;Target=comp142896_c0_seq1 727 734 -
ChrX	stalkie_big_nohaplotig	exon	44814812	44814817	100	-	.	Parent=comp142896_c0_seq1.mrna1;Target=comp142896_c0_seq1 735 740 -
ChrX	stalkie_big_nohaplotig	exon	44820577	44820579	100	-	.	Parent=comp142896_c0_seq1.mrna1;Target=comp142896_c0_seq1 741 743 -
ChrX	stalkie_big_nohaplotig	exon	44822260	44822262	100	-	.	Parent=comp142896_c0_seq1.mrna1;Target=comp142896_c0_seq1 744 746 -
ChrX	stalkie_big_nohaplotig	exon	44827825	44827826	100	-	.	Parent=comp142896_c0_seq1.mrna1;Target=comp142896_c0_seq1 747 748 -
ChrX	stalkie_big_nohaplotig	exon	44838274	44838279	100	-	.	Parent=comp142896_c0_seq1.mrna1;Target=comp142896_c0_seq1 749 754 -
ChrX	stalkie_big_nohaplotig	exon	44839706	44839709	100	-	.	Parent=comp142896_c0_seq1.mrna1;Target=comp142896_c0_seq1 755 758 -
ChrX	stalkie_big_nohaplotig	exon	44850385	44850391	100	-	.	Parent=comp142896_c0_seq1.mrna1;Target=comp142896_c0_seq1 759 765 -
ChrX	stalkie_big_nohaplotig	exon	44850984	44850988	100	-	.	Parent=comp142896_c0_seq1.mrna1;Target=comp142896_c0_seq1 766 770 -
ChrX	stalkie_big_nohaplotig	exon	44856520	44856527	100	-	.	Parent=comp142896_c0_seq1.mrna1;Target=comp142896_c0_seq1 771 778 -
ChrX	stalkie_big_nohaplotig	exon	44856546	44856548	100	-	.	Parent=comp142896_c0_seq1.mrna1;Target=comp142896_c0_seq1 806 808 -
ChrX	stalkie_big_nohaplotig	CDS	43921356	43921457	.	-	0	Parent=comp142896_c0_seq1.mrna1;Target=comp142896_c0_seq1 201 302 .
ChrX	stalkie_big_nohaplotig	CDS	43921513	43921768	.	-	1	Parent=comp142896_c0_seq1.mrna1;Target=comp142896_c0_seq1 303 558 .
ChrX	stalkie_big_nohaplotig	CDS	43921833	43921879	.	-	0	Parent=comp142896_c0_seq1.mrna1;Target=comp142896_c0_seq1 559 605 .
ChrX	gffcl	locus	43995379	43997204	.	+	.	ID=RLOC_00002560;geneIDs=ORF819.path1;transcripts=ORF819.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	43995379	43997204	.	+	.	ID=ORF819.mrna1;geneID=ORF819.path1;Name=ORF819;Dir=sensecoverage=100.0;identity=99.6;matches=1405;mismatches=5;indels=0;unknowns=0;locus=RLOC_00002560
ChrX	stalkie_big_nohaplotig	exon	43995379	43996118	99	+	.	Parent=ORF819.mrna1;Target=ORF819 1 740 +
ChrX	stalkie_big_nohaplotig	exon	43996173	43996345	98	+	.	Parent=ORF819.mrna1;Target=ORF819 741 913 +
ChrX	stalkie_big_nohaplotig	exon	43996400	43996584	99	+	.	Parent=ORF819.mrna1;Target=ORF819 914 1098 +
ChrX	stalkie_big_nohaplotig	exon	43996833	43997045	99	+	.	Parent=ORF819.mrna1;Target=ORF819 1099 1311 +
ChrX	stalkie_big_nohaplotig	exon	43997106	43997204	100	+	.	Parent=ORF819.mrna1;Target=ORF819 1312 1410 +
ChrX	stalkie_big_nohaplotig	CDS	43995379	43996118	.	+	0	Parent=ORF819.mrna1;Target=ORF819 1 740 +
ChrX	stalkie_big_nohaplotig	CDS	43996173	43996345	.	+	1	Parent=ORF819.mrna1;Target=ORF819 741 913 +
ChrX	stalkie_big_nohaplotig	CDS	43996400	43996584	.	+	2	Parent=ORF819.mrna1;Target=ORF819 914 1098 +
ChrX	stalkie_big_nohaplotig	CDS	43996833	43997045	.	+	0	Parent=ORF819.mrna1;Target=ORF819 1099 1311 +
ChrX	stalkie_big_nohaplotig	CDS	43997106	43997204	.	+	0	Parent=ORF819.mrna1;Target=ORF819 1312 1410 +
ChrX	gffcl	locus	44014288	44015260	.	+	.	ID=RLOC_00002561;geneIDs=ORF2150.path1;transcripts=ORF2150.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44014288	44015260	.	+	.	ID=ORF2150.mrna1;geneID=ORF2150.path1;Name=ORF2150;Dir=sensecoverage=100.0;identity=98.6;matches=896;mismatches=13;indels=0;unknowns=0;locus=RLOC_00002561
ChrX	stalkie_big_nohaplotig	exon	44014288	44015065	98	+	.	Parent=ORF2150.mrna1;Target=ORF2150 1 778 +
ChrX	stalkie_big_nohaplotig	exon	44015130	44015260	99	+	.	Parent=ORF2150.mrna1;Target=ORF2150 779 909 +
ChrX	stalkie_big_nohaplotig	CDS	44014288	44015065	.	+	0	Parent=ORF2150.mrna1;Target=ORF2150 1 778 +
ChrX	stalkie_big_nohaplotig	CDS	44015130	44015260	.	+	2	Parent=ORF2150.mrna1;Target=ORF2150 779 909 +
ChrX	gffcl	locus	44184476	44185066	.	-	.	ID=RLOC_00002562;geneIDs=comp153914_c0_seq1.path1;transcripts=comp153914_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44184476	44185066	.	-	.	ID=comp153914_c0_seq1.mrna1;geneID=comp153914_c0_seq1.path1;Name=comp153914_c0_seq1;Dir=indeterminatecoverage=95.3;identity=99.8;matches=590;mismatches=1;indels=0;unknowns=0;Target=comp153914_c0_seq1 591 1 .;CDS_Target=comp153914_c0_seq1 504 403 .;locus=RLOC_00002562
ChrX	stalkie_big_nohaplotig	exon	44184476	44185066	99	-	.	Parent=comp153914_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	44184563	44184664	.	-	0	Parent=comp153914_c0_seq1.mrna1
ChrX	gffcl	locus	44186975	44206311	.	-	.	ID=RLOC_00002563;geneIDs=FBgn0032629.1.path1;transcripts=FBgn0032629.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44186975	44206311	.	-	.	ID=FBgn0032629.1.mrna1;geneID=FBgn0032629.1.path1;Name=FBgn0032629.1;Dir=sensecoverage=91.9;identity=99.9;matches=1027;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002563
ChrX	stalkie_big_nohaplotig	exon	44186975	44187391	99	-	.	Parent=FBgn0032629.1.mrna1;Target=FBgn0032629.1 703 1119 +
ChrX	stalkie_big_nohaplotig	exon	44191023	44191288	100	-	.	Parent=FBgn0032629.1.mrna1;Target=FBgn0032629.1 437 702 +
ChrX	stalkie_big_nohaplotig	exon	44198176	44198311	100	-	.	Parent=FBgn0032629.1.mrna1;Target=FBgn0032629.1 301 436 +
ChrX	stalkie_big_nohaplotig	exon	44206103	44206311	100	-	.	Parent=FBgn0032629.1.mrna1;Target=FBgn0032629.1 92 300 +
ChrX	stalkie_big_nohaplotig	CDS	44186975	44187391	.	-	0	Parent=FBgn0032629.1.mrna1;Target=FBgn0032629.1 703 1119 +
ChrX	stalkie_big_nohaplotig	CDS	44191023	44191288	.	-	2	Parent=FBgn0032629.1.mrna1;Target=FBgn0032629.1 437 702 +
ChrX	stalkie_big_nohaplotig	CDS	44198176	44198311	.	-	0	Parent=FBgn0032629.1.mrna1;Target=FBgn0032629.1 301 436 +
ChrX	stalkie_big_nohaplotig	CDS	44206103	44206309	.	-	0	Parent=FBgn0032629.1.mrna1;Target=FBgn0032629.1 94 300 +
ChrX	gffcl	locus	44242148	44242604	.	+	.	ID=RLOC_00002564;geneIDs=comp113132_c0_seq1.path1;transcripts=comp113132_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44242148	44242604	.	+	.	ID=comp113132_c0_seq1.mrna1;geneID=comp113132_c0_seq1.path1;Name=comp113132_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.8;matches=456;mismatches=1;indels=0;unknowns=0;Target=comp113132_c0_seq1 462 6 .;CDS_Target=comp113132_c0_seq1 129 55 .;locus=RLOC_00002564
ChrX	stalkie_big_nohaplotig	exon	44242148	44242604	99	+	.	Parent=comp113132_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	44242197	44242271	.	+	0	Parent=comp113132_c0_seq1.mrna1
ChrX	gffcl	locus	44356290	44356790	.	-	.	ID=RLOC_00002565;geneIDs=comp1677649_c0_seq1.path1;transcripts=comp1677649_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44356290	44356790	.	-	.	ID=comp1677649_c0_seq1.mrna1;geneID=comp1677649_c0_seq1.path1;Name=comp1677649_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=501;mismatches=0;indels=0;unknowns=0;Target=comp1677649_c0_seq1 501 1 .;CDS_Target=comp1677649_c0_seq1 328 215 .;locus=RLOC_00002565
ChrX	stalkie_big_nohaplotig	exon	44356290	44356790	100	-	.	Parent=comp1677649_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	44356463	44356576	.	-	0	Parent=comp1677649_c0_seq1.mrna1
ChrX	gffcl	locus	44415866	44437046	.	-	.	ID=RLOC_00002566;geneIDs=ORF670.path1;transcripts=ORF670.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44415866	44437046	.	-	.	ID=ORF670.mrna1;geneID=ORF670.path1;Name=ORF670;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1543;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002566
ChrX	stalkie_big_nohaplotig	exon	44415866	44417276	99	-	.	Parent=ORF670.mrna1;Target=ORF670 1545 135 .
ChrX	stalkie_big_nohaplotig	exon	44436913	44437046	100	-	.	Parent=ORF670.mrna1;Target=ORF670 134 1 .
ChrX	stalkie_big_nohaplotig	CDS	44415866	44417276	.	-	1	Parent=ORF670.mrna1;Target=ORF670 1545 135 .
ChrX	stalkie_big_nohaplotig	CDS	44436913	44437046	.	-	0	Parent=ORF670.mrna1;Target=ORF670 134 1 .
ChrX	gffcl	locus	44446344	44446412	.	+	.	ID=RLOC_00002567;geneIDs=comp162581_c3_seq1.path2;transcripts=comp162581_c3_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	44446344	44446412	.	+	.	ID=comp162581_c3_seq1.mrna2;geneID=comp162581_c3_seq1.path2;Name=comp162581_c3_seq1;Dir=indeterminatecoverage=6.8;identity=95.7;matches=66;mismatches=3;indels=0;unknowns=0;Target=comp162581_c3_seq1 1010 942 .;locus=RLOC_00002567
ChrX	stalkie_big_nohaplotig	exon	44446344	44446412	95	+	.	Parent=comp162581_c3_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	44446344	44446412	.	+	2	Parent=comp162581_c3_seq1.mrna2
ChrX	gffcl	locus	44490274	44491331	.	-	.	ID=RLOC_00002568;geneIDs=comp156321_c0_seq1.path1;transcripts=comp156321_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44490274	44491331	.	-	.	ID=comp156321_c0_seq1.mrna1;geneID=comp156321_c0_seq1.path1;Name=comp156321_c0_seq1;Dir=indeterminatecoverage=92.0;identity=96.9;matches=1049;mismatches=8;indels=26;unknowns=0;Target=comp156321_c0_seq1 1167 86 .;CDS_Target=comp156321_c0_seq1 517 374 .;locus=RLOC_00002568
ChrX	stalkie_big_nohaplotig	exon	44490274	44491331	96	-	.	Parent=comp156321_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	44490900	44491043	.	-	0	Parent=comp156321_c0_seq1.mrna1
ChrX	gffcl	locus	44498631	44499515	.	+	.	ID=RLOC_00002569;geneIDs=ORF2270.path1,comp149616_c0_seq1.path1;transcripts=ORF2270.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44498631	44499515	.	+	.	ID=ORF2270.mrna1;geneID=ORF2270.path1;Name=ORF2270;Dir=indeterminatecoverage=100.0;identity=99.9;matches=884;mismatches=1;indels=0;unknowns=0;Target=ORF2270 885 1 .;locus=RLOC_00002569
ChrX	stalkie_big_nohaplotig	exon	44498631	44499515	99	+	.	Parent=ORF2270.mrna1
ChrX	stalkie_big_nohaplotig	CDS	44498631	44499515	.	+	0	Parent=ORF2270.mrna1
ChrX	gffcl	locus	44512455	44513703	.	-	.	ID=RLOC_00002570;geneIDs=comp143270_c0_seq1.path1;transcripts=comp143270_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44512455	44513703	.	-	.	ID=comp143270_c0_seq1.mrna1;geneID=comp143270_c0_seq1.path1;Name=comp143270_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=1249;mismatches=0;indels=0;unknowns=0;Target=comp143270_c0_seq1 1249 1 .;CDS_Target=comp143270_c0_seq1 1247 840 .;locus=RLOC_00002570
ChrX	stalkie_big_nohaplotig	exon	44512455	44513703	100	-	.	Parent=comp143270_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	44512457	44512864	.	-	0	Parent=comp143270_c0_seq1.mrna1
ChrX	gffcl	locus	44521550	44522235	.	-	.	ID=RLOC_00002571;geneIDs=comp150220_c0_seq1.path1;transcripts=comp150220_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44521550	44522235	.	-	.	ID=comp150220_c0_seq1.mrna1;geneID=comp150220_c0_seq1.path1;Name=comp150220_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.7;matches=685;mismatches=1;indels=1;unknowns=0;Target=comp150220_c0_seq1 696 10 .;CDS_Target=comp150220_c0_seq1 138 10 .;locus=RLOC_00002571
ChrX	stalkie_big_nohaplotig	exon	44521550	44522235	99	-	.	Parent=comp150220_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	44522107	44522235	.	-	0	Parent=comp150220_c0_seq1.mrna1
ChrX	gffcl	locus	44526084	44798449	.	-	.	ID=RLOC_00002572;geneIDs=FBgn0031285.2.path1,comp159896_c0_seq1.path1;transcripts=comp159896_c0_seq1.mrna1,FBgn0031285.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44526084	44798449	.	-	.	ID=comp159896_c0_seq1.mrna1;geneID=comp159896_c0_seq1.path1;Name=comp159896_c0_seq1;Dir=sensecoverage=84.5;identity=99.5;matches=1168;mismatches=6;indels=0;unknowns=0;locus=RLOC_00002572
ChrX	stalkie_big_nohaplotig	exon	44526084	44526085	100	-	.	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1195 1196 +
ChrX	stalkie_big_nohaplotig	exon	44537718	44537728	100	-	.	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1184 1194 +
ChrX	stalkie_big_nohaplotig	exon	44542661	44542669	100	-	.	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1175 1183 +
ChrX	stalkie_big_nohaplotig	exon	44560235	44560238	100	-	.	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1171 1174 +
ChrX	stalkie_big_nohaplotig	exon	44570079	44570081	100	-	.	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1167 1169 +
ChrX	stalkie_big_nohaplotig	exon	44571557	44571558	100	-	.	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1165 1166 +
ChrX	stalkie_big_nohaplotig	exon	44573080	44573089	100	-	.	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1155 1164 +
ChrX	stalkie_big_nohaplotig	exon	44586033	44586037	100	-	.	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1150 1154 +
ChrX	stalkie_big_nohaplotig	exon	44588935	44588939	100	-	.	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1145 1149 +
ChrX	stalkie_big_nohaplotig	exon	44597994	44597997	100	-	.	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1141 1144 +
ChrX	stalkie_big_nohaplotig	exon	44602134	44602136	100	-	.	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1138 1140 +
ChrX	stalkie_big_nohaplotig	exon	44613395	44613399	100	-	.	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1132 1136 +
ChrX	stalkie_big_nohaplotig	exon	44617489	44617493	100	-	.	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1127 1131 +
ChrX	stalkie_big_nohaplotig	exon	44620189	44620193	100	-	.	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1122 1126 +
ChrX	stalkie_big_nohaplotig	exon	44637309	44637390	100	-	.	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1033 1114 +
ChrX	stalkie_big_nohaplotig	exon	44637452	44637541	100	-	.	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 943 1032 +
ChrX	stalkie_big_nohaplotig	exon	44796339	44797025	99	-	.	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 256 942 +
ChrX	stalkie_big_nohaplotig	exon	44798153	44798239	100	-	.	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 169 255 +
ChrX	stalkie_big_nohaplotig	exon	44798297	44798449	98	-	.	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 16 168 +
ChrX	stalkie_big_nohaplotig	CDS	44570079	44570081	.	-	2	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1167 1169 +
ChrX	stalkie_big_nohaplotig	CDS	44571557	44571558	.	-	1	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1165 1166 +
ChrX	stalkie_big_nohaplotig	CDS	44573080	44573089	.	-	2	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1155 1164 +
ChrX	stalkie_big_nohaplotig	CDS	44586033	44586037	.	-	1	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1150 1154 +
ChrX	stalkie_big_nohaplotig	CDS	44588935	44588939	.	-	0	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1145 1149 +
ChrX	stalkie_big_nohaplotig	CDS	44597994	44597997	.	-	1	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1141 1144 +
ChrX	stalkie_big_nohaplotig	CDS	44602134	44602136	.	-	1	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1138 1140 +
ChrX	stalkie_big_nohaplotig	CDS	44613395	44613399	.	-	0	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1132 1136 +
ChrX	stalkie_big_nohaplotig	CDS	44617489	44617493	.	-	2	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1127 1131 +
ChrX	stalkie_big_nohaplotig	CDS	44620189	44620193	.	-	1	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1122 1126 +
ChrX	stalkie_big_nohaplotig	CDS	44637309	44637390	.	-	2	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 1033 1114 +
ChrX	stalkie_big_nohaplotig	CDS	44637452	44637541	.	-	2	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 943 1032 +
ChrX	stalkie_big_nohaplotig	CDS	44796339	44797017	.	-	0	Parent=comp159896_c0_seq1.mrna1;Target=comp159896_c0_seq1 264 942 +
ChrX	stalkie_big_nohaplotig	mRNA	44796037	44797020	.	-	.	ID=FBgn0031285.2.mrna1;geneID=FBgn0031285.2.path1;Name=FBgn0031285.2;Dir=sensecoverage=100.0;identity=99.7;matches=915;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002572
ChrX	stalkie_big_nohaplotig	exon	44796037	44796182	100	-	.	Parent=FBgn0031285.2.mrna1;Target=FBgn0031285.2 773 918 +
ChrX	stalkie_big_nohaplotig	exon	44796249	44797020	99	-	.	Parent=FBgn0031285.2.mrna1;Target=FBgn0031285.2 1 772 +
ChrX	stalkie_big_nohaplotig	CDS	44796037	44796182	.	-	2	Parent=FBgn0031285.2.mrna1;Target=FBgn0031285.2 773 918 +
ChrX	stalkie_big_nohaplotig	CDS	44796249	44797020	.	-	0	Parent=FBgn0031285.2.mrna1;Target=FBgn0031285.2 1 772 +
ChrX	gffcl	locus	44578696	44582244	.	+	.	ID=RLOC_00002573;geneIDs=ORF327.path1;transcripts=ORF327.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44578696	44582244	.	+	.	ID=ORF327.mrna1;geneID=ORF327.path1;Name=ORF327;Dir=sensecoverage=100.0;identity=99.9;matches=2010;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002573
ChrX	stalkie_big_nohaplotig	exon	44578696	44578904	99	+	.	Parent=ORF327.mrna1;Target=ORF327 1 209 +
ChrX	stalkie_big_nohaplotig	exon	44579661	44580144	100	+	.	Parent=ORF327.mrna1;Target=ORF327 210 693 +
ChrX	stalkie_big_nohaplotig	exon	44580394	44580527	100	+	.	Parent=ORF327.mrna1;Target=ORF327 694 827 +
ChrX	stalkie_big_nohaplotig	exon	44580945	44581065	100	+	.	Parent=ORF327.mrna1;Target=ORF327 828 948 +
ChrX	stalkie_big_nohaplotig	exon	44581180	44582244	99	+	.	Parent=ORF327.mrna1;Target=ORF327 949 2013 +
ChrX	stalkie_big_nohaplotig	CDS	44578696	44578904	.	+	0	Parent=ORF327.mrna1;Target=ORF327 1 209 +
ChrX	stalkie_big_nohaplotig	CDS	44579661	44580144	.	+	1	Parent=ORF327.mrna1;Target=ORF327 210 693 +
ChrX	stalkie_big_nohaplotig	CDS	44580394	44580527	.	+	0	Parent=ORF327.mrna1;Target=ORF327 694 827 +
ChrX	stalkie_big_nohaplotig	CDS	44580945	44581065	.	+	1	Parent=ORF327.mrna1;Target=ORF327 828 948 +
ChrX	stalkie_big_nohaplotig	CDS	44581180	44582244	.	+	0	Parent=ORF327.mrna1;Target=ORF327 949 2013 +
ChrX	gffcl	locus	44618165	45934691	.	+	.	ID=RLOC_00002574;geneIDs=comp162793_c2_seq1.path1;transcripts=comp162793_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44618165	45934691	.	+	.	ID=comp162793_c2_seq1.mrna1;geneID=comp162793_c2_seq1.path1;Name=comp162793_c2_seq1;Dir=indeterminatecoverage=100.0;identity=92.8;matches=1007;mismatches=39;indels=39;unknowns=0;Target=comp162793_c2_seq1 1137 442 .;locus=RLOC_00002574
ChrX	stalkie_big_nohaplotig	exon	44618165	44618290	99	+	.	Parent=comp162793_c2_seq1.mrna1;Target=comp162793_c2_seq1 126 1 .
ChrX	stalkie_big_nohaplotig	exon	44619419	44619430	30	+	.	Parent=comp162793_c2_seq1.mrna1;Target=comp162793_c2_seq1 163 144 .
ChrX	stalkie_big_nohaplotig	exon	44623636	44623639	100	+	.	Parent=comp162793_c2_seq1.mrna1;Target=comp162793_c2_seq1 167 164 .
ChrX	stalkie_big_nohaplotig	exon	44628838	44628846	88	+	.	Parent=comp162793_c2_seq1.mrna1;Target=comp162793_c2_seq1 176 168 .
ChrX	stalkie_big_nohaplotig	exon	44633020	44633029	90	+	.	Parent=comp162793_c2_seq1.mrna1;Target=comp162793_c2_seq1 186 177 .
ChrX	stalkie_big_nohaplotig	exon	44638929	44638937	88	+	.	Parent=comp162793_c2_seq1.mrna1;Target=comp162793_c2_seq1 195 187 .
ChrX	stalkie_big_nohaplotig	exon	44640644	44640649	100	+	.	Parent=comp162793_c2_seq1.mrna1;Target=comp162793_c2_seq1 202 197 .
ChrX	stalkie_big_nohaplotig	exon	44641085	44641091	100	+	.	Parent=comp162793_c2_seq1.mrna1;Target=comp162793_c2_seq1 209 203 .
ChrX	stalkie_big_nohaplotig	exon	44643978	44643984	100	+	.	Parent=comp162793_c2_seq1.mrna1;Target=comp162793_c2_seq1 216 210 .
ChrX	stalkie_big_nohaplotig	exon	45920474	45920478	100	+	.	Parent=comp162793_c2_seq1.mrna1;Target=comp162793_c2_seq1 221 217 .
ChrX	stalkie_big_nohaplotig	exon	45920491	45920494	100	+	.	Parent=comp162793_c2_seq1.mrna1;Target=comp162793_c2_seq1 233 230 .
ChrX	stalkie_big_nohaplotig	exon	45921246	45921252	100	+	.	Parent=comp162793_c2_seq1.mrna1;Target=comp162793_c2_seq1 240 234 .
ChrX	stalkie_big_nohaplotig	exon	45930752	45930863	78	+	.	Parent=comp162793_c2_seq1.mrna1;Target=comp162793_c2_seq1 365 242 .
ChrX	stalkie_big_nohaplotig	exon	45931848	45931855	100	+	.	Parent=comp162793_c2_seq1.mrna1;Target=comp162793_c2_seq1 377 370 .
ChrX	stalkie_big_nohaplotig	exon	45933955	45934691	95	+	.	Parent=comp162793_c2_seq1.mrna1;Target=comp162793_c2_seq1 1137 420 .
ChrX	stalkie_big_nohaplotig	CDS	45933996	45934691	.	+	0	Parent=comp162793_c2_seq1.mrna1
ChrX	gffcl	locus	44710178	44710702	.	+	.	ID=RLOC_00002575;geneIDs=comp105050_c0_seq1.path1;transcripts=comp105050_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44710178	44710702	.	+	.	ID=comp105050_c0_seq1.mrna1;geneID=comp105050_c0_seq1.path1;Name=comp105050_c0_seq1;Dir=indeterminatecoverage=97.9;identity=96.0;matches=510;mismatches=3;indels=18;unknowns=0;Target=comp105050_c0_seq1 523 5 .;CDS_Target=comp105050_c0_seq1 166 83 .;locus=RLOC_00002575
ChrX	stalkie_big_nohaplotig	exon	44710178	44710702	96	+	.	Parent=comp105050_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	44710256	44710339	.	+	0	Parent=comp105050_c0_seq1.mrna1
ChrX	gffcl	locus	44711076	44711613	.	-	.	ID=RLOC_00002576;geneIDs=comp145284_c0_seq1.path1;transcripts=comp145284_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44711076	44711613	.	-	.	ID=comp145284_c0_seq1.mrna1;geneID=comp145284_c0_seq1.path1;Name=comp145284_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.8;matches=538;mismatches=0;indels=18;unknowns=0;Target=comp145284_c0_seq1 556 1 .;CDS_Target=comp145284_c0_seq1 556 2 .;locus=RLOC_00002576
ChrX	stalkie_big_nohaplotig	exon	44711076	44711613	96	-	.	Parent=comp145284_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	44711076	44711612	.	-	0	Parent=comp145284_c0_seq1.mrna1
ChrX	gffcl	locus	44720706	44721069	.	-	.	ID=RLOC_00002577;geneIDs=comp115741_c0_seq1.path1;transcripts=comp115741_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44720706	44721069	.	-	.	ID=comp115741_c0_seq1.mrna1;geneID=comp115741_c0_seq1.path1;Name=comp115741_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.3;matches=358;mismatches=0;indels=30;unknowns=0;Target=comp115741_c0_seq1 382 1 .;CDS_Target=comp115741_c0_seq1 369 1 .;locus=RLOC_00002577
ChrX	stalkie_big_nohaplotig	exon	44720706	44721069	92	-	.	Parent=comp115741_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	44720719	44721069	.	-	0	Parent=comp115741_c0_seq1.mrna1
ChrX	gffcl	locus	44722853	44723208	.	-	.	ID=RLOC_00002578;geneIDs=comp168015_c0_seq1.path1;transcripts=comp168015_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44722853	44723208	.	-	.	ID=comp168015_c0_seq1.mrna1;geneID=comp168015_c0_seq1.path1;Name=comp168015_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=356;mismatches=0;indels=0;unknowns=0;Target=comp168015_c0_seq1 356 1 .;CDS_Target=comp168015_c0_seq1 166 2 .;locus=RLOC_00002578
ChrX	stalkie_big_nohaplotig	exon	44722853	44723208	100	-	.	Parent=comp168015_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	44723043	44723207	.	-	0	Parent=comp168015_c0_seq1.mrna1
ChrX	gffcl	locus	44723612	44723930	.	-	.	ID=RLOC_00002579;geneIDs=comp120237_c1_seq1.path1;transcripts=comp120237_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44723612	44723930	.	-	.	ID=comp120237_c1_seq1.mrna1;geneID=comp120237_c1_seq1.path1;Name=comp120237_c1_seq1;Dir=sensecoverage=92.1;identity=95.4;matches=250;mismatches=0;indels=12;unknowns=0;locus=RLOC_00002579
ChrX	stalkie_big_nohaplotig	exon	44723612	44723755	92	-	.	Parent=comp120237_c1_seq1.mrna1;Target=comp120237_c1_seq1 135 278 +
ChrX	stalkie_big_nohaplotig	exon	44723819	44723930	100	-	.	Parent=comp120237_c1_seq1.mrna1;Target=comp120237_c1_seq1 23 134 +
ChrX	stalkie_big_nohaplotig	CDS	44723613	44723755	.	-	2	Parent=comp120237_c1_seq1.mrna1;Target=comp120237_c1_seq1 135 277 +
ChrX	stalkie_big_nohaplotig	CDS	44723819	44723930	.	-	0	Parent=comp120237_c1_seq1.mrna1;Target=comp120237_c1_seq1 23 134 +
ChrX	gffcl	locus	44739219	44740277	.	-	.	ID=RLOC_00002580;geneIDs=FBgn0034215.3.path1;transcripts=FBgn0034215.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44739219	44740277	.	-	.	ID=FBgn0034215.3.mrna1;geneID=FBgn0034215.3.path1;Name=FBgn0034215.3;Dir=sensecoverage=100.0;identity=99.9;matches=941;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002580
ChrX	stalkie_big_nohaplotig	exon	44739219	44739293	100	-	.	Parent=FBgn0034215.3.mrna1;Target=FBgn0034215.3 868 942 +
ChrX	stalkie_big_nohaplotig	exon	44739355	44740104	99	-	.	Parent=FBgn0034215.3.mrna1;Target=FBgn0034215.3 118 867 +
ChrX	stalkie_big_nohaplotig	exon	44740161	44740277	100	-	.	Parent=FBgn0034215.3.mrna1;Target=FBgn0034215.3 1 117 +
ChrX	stalkie_big_nohaplotig	CDS	44739219	44739293	.	-	0	Parent=FBgn0034215.3.mrna1;Target=FBgn0034215.3 868 942 +
ChrX	stalkie_big_nohaplotig	CDS	44739355	44740104	.	-	0	Parent=FBgn0034215.3.mrna1;Target=FBgn0034215.3 118 867 +
ChrX	stalkie_big_nohaplotig	CDS	44740161	44740277	.	-	0	Parent=FBgn0034215.3.mrna1;Target=FBgn0034215.3 1 117 +
ChrX	gffcl	locus	44789218	44805750	.	+	.	ID=RLOC_00002581;geneIDs=comp484063_c0_seq1.path2;transcripts=comp484063_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	44789218	44805750	.	+	.	ID=comp484063_c0_seq1.mrna2;geneID=comp484063_c0_seq1.path2;Name=comp484063_c0_seq1;Dir=indeterminatecoverage=5.5;identity=100.0;matches=20;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002581
ChrX	stalkie_big_nohaplotig	exon	44789218	44789223	100	+	.	Parent=comp484063_c0_seq1.mrna2;Target=comp484063_c0_seq1 35 30 .
ChrX	stalkie_big_nohaplotig	exon	44789431	44789434	100	+	.	Parent=comp484063_c0_seq1.mrna2;Target=comp484063_c0_seq1 39 36 .
ChrX	stalkie_big_nohaplotig	exon	44797235	44797238	100	+	.	Parent=comp484063_c0_seq1.mrna2;Target=comp484063_c0_seq1 43 40 .
ChrX	stalkie_big_nohaplotig	exon	44805745	44805750	100	+	.	Parent=comp484063_c0_seq1.mrna2;Target=comp484063_c0_seq1 49 44 .
ChrX	stalkie_big_nohaplotig	CDS	44789218	44789223	.	+	0	Parent=comp484063_c0_seq1.mrna2;Target=comp484063_c0_seq1 35 30 .
ChrX	stalkie_big_nohaplotig	CDS	44789431	44789434	.	+	0	Parent=comp484063_c0_seq1.mrna2;Target=comp484063_c0_seq1 39 36 .
ChrX	stalkie_big_nohaplotig	CDS	44797235	44797238	.	+	2	Parent=comp484063_c0_seq1.mrna2;Target=comp484063_c0_seq1 43 40 .
ChrX	stalkie_big_nohaplotig	CDS	44805745	44805748	.	+	1	Parent=comp484063_c0_seq1.mrna2;Target=comp484063_c0_seq1 47 44 .
ChrX	gffcl	locus	44813297	44818026	.	+	.	ID=RLOC_00002583;geneIDs=comp150333_c0_seq1.path1;transcripts=comp150333_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44813297	44818026	.	+	.	ID=comp150333_c0_seq1.mrna1;geneID=comp150333_c0_seq1.path1;Name=comp150333_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=877;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002583
ChrX	stalkie_big_nohaplotig	exon	44813297	44813704	100	+	.	Parent=comp150333_c0_seq1.mrna1;Target=comp150333_c0_seq1 470 877 -
ChrX	stalkie_big_nohaplotig	exon	44817496	44817777	100	+	.	Parent=comp150333_c0_seq1.mrna1;Target=comp150333_c0_seq1 188 469 -
ChrX	stalkie_big_nohaplotig	exon	44817840	44818026	100	+	.	Parent=comp150333_c0_seq1.mrna1;Target=comp150333_c0_seq1 1 187 -
ChrX	stalkie_big_nohaplotig	CDS	44817537	44817777	.	+	0	Parent=comp150333_c0_seq1.mrna1;Target=comp150333_c0_seq1 188 428 .
ChrX	stalkie_big_nohaplotig	CDS	44817840	44818024	.	+	2	Parent=comp150333_c0_seq1.mrna1;Target=comp150333_c0_seq1 3 187 .
ChrX	gffcl	locus	44866756	44870075	.	+	.	ID=RLOC_00002584;geneIDs=comp161190_c1_seq1.path1;transcripts=comp161190_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44866756	44870075	.	+	.	ID=comp161190_c1_seq1.mrna1;geneID=comp161190_c1_seq1.path1;Name=comp161190_c1_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=3200;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002584
ChrX	stalkie_big_nohaplotig	exon	44866756	44869183	99	+	.	Parent=comp161190_c1_seq1.mrna1;Target=comp161190_c1_seq1 776 3203 -
ChrX	stalkie_big_nohaplotig	exon	44869242	44869316	100	+	.	Parent=comp161190_c1_seq1.mrna1;Target=comp161190_c1_seq1 701 775 -
ChrX	stalkie_big_nohaplotig	exon	44869376	44870075	99	+	.	Parent=comp161190_c1_seq1.mrna1;Target=comp161190_c1_seq1 1 700 -
ChrX	stalkie_big_nohaplotig	CDS	44866756	44869183	.	+	0	Parent=comp161190_c1_seq1.mrna1;Target=comp161190_c1_seq1 776 3203 .
ChrX	stalkie_big_nohaplotig	CDS	44869242	44869316	.	+	2	Parent=comp161190_c1_seq1.mrna1;Target=comp161190_c1_seq1 701 775 .
ChrX	stalkie_big_nohaplotig	CDS	44869376	44869953	.	+	2	Parent=comp161190_c1_seq1.mrna1;Target=comp161190_c1_seq1 123 700 .
ChrX	stalkie_big_nohaplotig	mRNA	44926338	44926813	.	-	.	ID=comp74240_c0_seq1.mrna1;geneID=comp74240_c0_seq1.path1;Name=comp74240_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=476;mismatches=0;indels=0;unknowns=0;Target=comp74240_c0_seq1 476 1 .;CDS_Target=comp74240_c0_seq1 307 230 .;locus=RLOC_00002585
ChrX	stalkie_big_nohaplotig	exon	44926338	44926813	100	-	.	Parent=comp74240_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	44926507	44926584	.	-	0	Parent=comp74240_c0_seq1.mrna1
ChrX	gffcl	locus	44925688	44925913	.	+	.	ID=RLOC_00002586;geneIDs=comp148236_c0_seq1.path1;transcripts=comp148236_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44925688	44925913	.	+	.	ID=comp148236_c0_seq1.mrna1;geneID=comp148236_c0_seq1.path1;Name=comp148236_c0_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=226;mismatches=0;indels=0;unknowns=0;Target=comp148236_c0_seq1 227 2 .;CDS_Target=comp148236_c0_seq1 178 107 .;locus=RLOC_00002586
ChrX	stalkie_big_nohaplotig	exon	44925688	44925913	100	+	.	Parent=comp148236_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	44925793	44925864	.	+	0	Parent=comp148236_c0_seq1.mrna1
ChrX	gffcl	locus	44962143	44965941	.	+	.	ID=RLOC_00002587;geneIDs=FBgn0003278.1.path1;transcripts=FBgn0003278.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44962143	44965941	.	+	.	ID=FBgn0003278.1.mrna1;geneID=FBgn0003278.1.path1;Name=FBgn0003278.1;Dir=sensecoverage=100.0;identity=99.9;matches=3513;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002587
ChrX	stalkie_big_nohaplotig	exon	44962143	44962361	100	+	.	Parent=FBgn0003278.1.mrna1;Target=FBgn0003278.1 1 219 +
ChrX	stalkie_big_nohaplotig	exon	44962415	44963456	100	+	.	Parent=FBgn0003278.1.mrna1;Target=FBgn0003278.1 220 1261 +
ChrX	stalkie_big_nohaplotig	exon	44963520	44963977	100	+	.	Parent=FBgn0003278.1.mrna1;Target=FBgn0003278.1 1262 1719 +
ChrX	stalkie_big_nohaplotig	exon	44964037	44964494	100	+	.	Parent=FBgn0003278.1.mrna1;Target=FBgn0003278.1 1720 2177 +
ChrX	stalkie_big_nohaplotig	exon	44964548	44964955	99	+	.	Parent=FBgn0003278.1.mrna1;Target=FBgn0003278.1 2178 2585 +
ChrX	stalkie_big_nohaplotig	exon	44965011	44965941	99	+	.	Parent=FBgn0003278.1.mrna1;Target=FBgn0003278.1 2586 3516 +
ChrX	stalkie_big_nohaplotig	CDS	44962143	44962361	.	+	0	Parent=FBgn0003278.1.mrna1;Target=FBgn0003278.1 1 219 +
ChrX	stalkie_big_nohaplotig	CDS	44962415	44963456	.	+	0	Parent=FBgn0003278.1.mrna1;Target=FBgn0003278.1 220 1261 +
ChrX	stalkie_big_nohaplotig	CDS	44963520	44963977	.	+	2	Parent=FBgn0003278.1.mrna1;Target=FBgn0003278.1 1262 1719 +
ChrX	stalkie_big_nohaplotig	CDS	44964037	44964494	.	+	0	Parent=FBgn0003278.1.mrna1;Target=FBgn0003278.1 1720 2177 +
ChrX	stalkie_big_nohaplotig	CDS	44964548	44964955	.	+	1	Parent=FBgn0003278.1.mrna1;Target=FBgn0003278.1 2178 2585 +
ChrX	stalkie_big_nohaplotig	CDS	44965011	44965941	.	+	1	Parent=FBgn0003278.1.mrna1;Target=FBgn0003278.1 2586 3516 +
ChrX	gffcl	locus	44969447	44969880	.	-	.	ID=RLOC_00002588;geneIDs=comp151892_c0_seq1.path1;transcripts=comp151892_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44969447	44969880	.	-	.	ID=comp151892_c0_seq1.mrna1;geneID=comp151892_c0_seq1.path1;Name=comp151892_c0_seq1;Dir=indeterminatecoverage=96.4;identity=100.0;matches=434;mismatches=0;indels=0;unknowns=0;Target=comp151892_c0_seq1 450 17 .;CDS_Target=comp151892_c0_seq1 221 144 .;locus=RLOC_00002588
ChrX	stalkie_big_nohaplotig	exon	44969447	44969880	100	-	.	Parent=comp151892_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	44969676	44969753	.	-	0	Parent=comp151892_c0_seq1.mrna1
ChrX	gffcl	locus	44972163	44976219	.	+	.	ID=RLOC_00002589;geneIDs=comp96313_c0_seq1.path1;transcripts=comp96313_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44972163	44976219	.	+	.	ID=comp96313_c0_seq1.mrna1;geneID=comp96313_c0_seq1.path1;Name=comp96313_c0_seq1;Dir=indeterminatecoverage=86.1;identity=100.0;matches=310;mismatches=0;indels=0;unknowns=0;Target=comp96313_c0_seq1 51 1 .;locus=RLOC_00002589
ChrX	stalkie_big_nohaplotig	exon	44972163	44972465	100	+	.	Parent=comp96313_c0_seq1.mrna1;Target=comp96313_c0_seq1 303 1 .
ChrX	stalkie_big_nohaplotig	exon	44976213	44976219	100	+	.	Parent=comp96313_c0_seq1.mrna1;Target=comp96313_c0_seq1 310 304 .
ChrX	stalkie_big_nohaplotig	CDS	44972163	44972213	.	+	0	Parent=comp96313_c0_seq1.mrna1
ChrX	gffcl	locus	44972907	44985201	.	-	.	ID=RLOC_00002590;geneIDs=FBgn0263350.1.path1;transcripts=FBgn0263350.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	44972907	44985201	.	-	.	ID=FBgn0263350.1.mrna1;geneID=FBgn0263350.1.path1;Name=FBgn0263350.1;Dir=sensecoverage=100.0;identity=100.0;matches=2838;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002590
ChrX	stalkie_big_nohaplotig	exon	44972907	44972981	100	-	.	Parent=FBgn0263350.1.mrna1;Target=FBgn0263350.1 2764 2838 +
ChrX	stalkie_big_nohaplotig	exon	44973061	44973265	100	-	.	Parent=FBgn0263350.1.mrna1;Target=FBgn0263350.1 2559 2763 +
ChrX	stalkie_big_nohaplotig	exon	44973858	44974141	100	-	.	Parent=FBgn0263350.1.mrna1;Target=FBgn0263350.1 2275 2558 +
ChrX	stalkie_big_nohaplotig	exon	44974210	44974489	100	-	.	Parent=FBgn0263350.1.mrna1;Target=FBgn0263350.1 1995 2274 +
ChrX	stalkie_big_nohaplotig	exon	44974554	44975180	100	-	.	Parent=FBgn0263350.1.mrna1;Target=FBgn0263350.1 1368 1994 +
ChrX	stalkie_big_nohaplotig	exon	44975251	44975438	100	-	.	Parent=FBgn0263350.1.mrna1;Target=FBgn0263350.1 1180 1367 +
ChrX	stalkie_big_nohaplotig	exon	44976235	44976898	100	-	.	Parent=FBgn0263350.1.mrna1;Target=FBgn0263350.1 516 1179 +
ChrX	stalkie_big_nohaplotig	exon	44976966	44977159	100	-	.	Parent=FBgn0263350.1.mrna1;Target=FBgn0263350.1 322 515 +
ChrX	stalkie_big_nohaplotig	exon	44977229	44977440	100	-	.	Parent=FBgn0263350.1.mrna1;Target=FBgn0263350.1 110 321 +
ChrX	stalkie_big_nohaplotig	exon	44985093	44985201	100	-	.	Parent=FBgn0263350.1.mrna1;Target=FBgn0263350.1 1 109 +
ChrX	stalkie_big_nohaplotig	CDS	44972907	44972981	.	-	0	Parent=FBgn0263350.1.mrna1;Target=FBgn0263350.1 2764 2838 +
ChrX	stalkie_big_nohaplotig	CDS	44973061	44973265	.	-	1	Parent=FBgn0263350.1.mrna1;Target=FBgn0263350.1 2559 2763 +
ChrX	stalkie_big_nohaplotig	CDS	44973858	44974141	.	-	0	Parent=FBgn0263350.1.mrna1;Target=FBgn0263350.1 2275 2558 +
ChrX	stalkie_big_nohaplotig	CDS	44974210	44974489	.	-	1	Parent=FBgn0263350.1.mrna1;Target=FBgn0263350.1 1995 2274 +
ChrX	stalkie_big_nohaplotig	CDS	44974554	44975180	.	-	1	Parent=FBgn0263350.1.mrna1;Target=FBgn0263350.1 1368 1994 +
ChrX	stalkie_big_nohaplotig	CDS	44975251	44975438	.	-	0	Parent=FBgn0263350.1.mrna1;Target=FBgn0263350.1 1180 1367 +
ChrX	stalkie_big_nohaplotig	CDS	44976235	44976898	.	-	1	Parent=FBgn0263350.1.mrna1;Target=FBgn0263350.1 516 1179 +
ChrX	stalkie_big_nohaplotig	CDS	44976966	44977159	.	-	0	Parent=FBgn0263350.1.mrna1;Target=FBgn0263350.1 322 515 +
ChrX	stalkie_big_nohaplotig	CDS	44977229	44977440	.	-	2	Parent=FBgn0263350.1.mrna1;Target=FBgn0263350.1 110 321 +
ChrX	stalkie_big_nohaplotig	CDS	44985093	44985201	.	-	0	Parent=FBgn0263350.1.mrna1;Target=FBgn0263350.1 1 109 +
ChrX	gffcl	locus	45001936	45003994	.	+	.	ID=RLOC_00002591;geneIDs=FBgn0263933.1.path1;transcripts=FBgn0263933.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45001936	45003994	.	+	.	ID=FBgn0263933.1.mrna1;geneID=FBgn0263933.1.path1;Name=FBgn0263933.1;Dir=sensecoverage=100.0;identity=100.0;matches=1926;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002591
ChrX	stalkie_big_nohaplotig	exon	45001936	45002041	100	+	.	Parent=FBgn0263933.1.mrna1;Target=FBgn0263933.1 1 106 +
ChrX	stalkie_big_nohaplotig	exon	45002121	45003097	100	+	.	Parent=FBgn0263933.1.mrna1;Target=FBgn0263933.1 107 1083 +
ChrX	stalkie_big_nohaplotig	exon	45003152	45003994	100	+	.	Parent=FBgn0263933.1.mrna1;Target=FBgn0263933.1 1084 1926 +
ChrX	stalkie_big_nohaplotig	CDS	45001936	45002041	.	+	0	Parent=FBgn0263933.1.mrna1;Target=FBgn0263933.1 1 106 +
ChrX	stalkie_big_nohaplotig	CDS	45002121	45003097	.	+	2	Parent=FBgn0263933.1.mrna1;Target=FBgn0263933.1 107 1083 +
ChrX	stalkie_big_nohaplotig	CDS	45003152	45003994	.	+	0	Parent=FBgn0263933.1.mrna1;Target=FBgn0263933.1 1084 1926 +
ChrX	gffcl	locus	45007774	45008976	.	-	.	ID=RLOC_00002592;geneIDs=FBgn0031252.1.path1;transcripts=FBgn0031252.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45007774	45008976	.	-	.	ID=FBgn0031252.1.mrna1;geneID=FBgn0031252.1.path1;Name=FBgn0031252.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1202;mismatches=1;indels=0;unknowns=0;Target=FBgn0031252.1 1203 1 .;locus=RLOC_00002592
ChrX	stalkie_big_nohaplotig	exon	45007774	45008976	99	-	.	Parent=FBgn0031252.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	45007774	45008976	.	-	0	Parent=FBgn0031252.1.mrna1
ChrX	gffcl	locus	45011439	45011933	.	+	.	ID=RLOC_00002593;geneIDs=FBgn0002593.2.path1;transcripts=FBgn0002593.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45011439	45011933	.	+	.	ID=FBgn0002593.2.mrna1;geneID=FBgn0002593.2.path1;Name=FBgn0002593.2;Dir=sensecoverage=100.0;identity=100.0;matches=357;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002593
ChrX	stalkie_big_nohaplotig	exon	45011439	45011531	100	+	.	Parent=FBgn0002593.2.mrna1;Target=FBgn0002593.2 1 93 +
ChrX	stalkie_big_nohaplotig	exon	45011670	45011933	100	+	.	Parent=FBgn0002593.2.mrna1;Target=FBgn0002593.2 94 357 +
ChrX	stalkie_big_nohaplotig	CDS	45011439	45011531	.	+	0	Parent=FBgn0002593.2.mrna1;Target=FBgn0002593.2 1 93 +
ChrX	stalkie_big_nohaplotig	CDS	45011670	45011933	.	+	0	Parent=FBgn0002593.2.mrna1;Target=FBgn0002593.2 94 357 +
ChrX	gffcl	locus	45016913	45098945	.	+	.	ID=RLOC_00002594;geneIDs=FBgn0020304.1.path1;transcripts=FBgn0020304.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45016913	45098945	.	+	.	ID=FBgn0020304.1.mrna1;geneID=FBgn0020304.1.path1;Name=FBgn0020304.1;Dir=sensecoverage=100.0;identity=99.8;matches=1947;mismatches=0;indels=3;unknowns=0;locus=RLOC_00002594
ChrX	stalkie_big_nohaplotig	exon	45016913	45017328	100	+	.	Parent=FBgn0020304.1.mrna1;Target=FBgn0020304.1 1 416 +
ChrX	stalkie_big_nohaplotig	exon	45084969	45085846	99	+	.	Parent=FBgn0020304.1.mrna1;Target=FBgn0020304.1 417 1297 +
ChrX	stalkie_big_nohaplotig	exon	45096809	45097021	100	+	.	Parent=FBgn0020304.1.mrna1;Target=FBgn0020304.1 1298 1510 +
ChrX	stalkie_big_nohaplotig	exon	45097078	45097481	100	+	.	Parent=FBgn0020304.1.mrna1;Target=FBgn0020304.1 1511 1914 +
ChrX	stalkie_big_nohaplotig	exon	45098910	45098945	100	+	.	Parent=FBgn0020304.1.mrna1;Target=FBgn0020304.1 1915 1950 +
ChrX	stalkie_big_nohaplotig	CDS	45016913	45017328	.	+	0	Parent=FBgn0020304.1.mrna1;Target=FBgn0020304.1 1 416 +
ChrX	stalkie_big_nohaplotig	CDS	45084969	45085846	.	+	1	Parent=FBgn0020304.1.mrna1;Target=FBgn0020304.1 417 1297 +
ChrX	stalkie_big_nohaplotig	CDS	45096809	45097021	.	+	2	Parent=FBgn0020304.1.mrna1;Target=FBgn0020304.1 1298 1510 +
ChrX	stalkie_big_nohaplotig	CDS	45097078	45097481	.	+	2	Parent=FBgn0020304.1.mrna1;Target=FBgn0020304.1 1511 1914 +
ChrX	stalkie_big_nohaplotig	CDS	45098910	45098945	.	+	0	Parent=FBgn0020304.1.mrna1;Target=FBgn0020304.1 1915 1950 +
ChrX	gffcl	locus	45030884	45031444	.	-	.	ID=RLOC_00002595;geneIDs=comp137638_c0_seq1.path1;transcripts=comp137638_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45030884	45031444	.	-	.	ID=comp137638_c0_seq1.mrna1;geneID=comp137638_c0_seq1.path1;Name=comp137638_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=561;mismatches=0;indels=0;unknowns=0;Target=comp137638_c0_seq1 561 1 .;CDS_Target=comp137638_c0_seq1 561 433 .;locus=RLOC_00002595
ChrX	stalkie_big_nohaplotig	exon	45030884	45031444	100	-	.	Parent=comp137638_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	45030884	45031012	.	-	0	Parent=comp137638_c0_seq1.mrna1
ChrX	gffcl	locus	45031741	45032144	.	-	.	ID=RLOC_00002596;geneIDs=comp116221_c0_seq1.path1;transcripts=comp116221_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45031741	45032144	.	-	.	ID=comp116221_c0_seq1.mrna1;geneID=comp116221_c0_seq1.path1;Name=comp116221_c0_seq1;Dir=indeterminatecoverage=99.5;identity=97.3;matches=393;mismatches=11;indels=0;unknowns=0;Target=comp116221_c0_seq1 404 1 .;CDS_Target=comp116221_c0_seq1 363 235 .;locus=RLOC_00002596
ChrX	stalkie_big_nohaplotig	exon	45031741	45032144	97	-	.	Parent=comp116221_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	45031782	45031910	.	-	0	Parent=comp116221_c0_seq1.mrna1
ChrX	gffcl	locus	45104735	45105101	.	+	.	ID=RLOC_00002597;geneIDs=comp116759_c0_seq1.path1;transcripts=comp116759_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45104735	45105101	.	+	.	ID=comp116759_c0_seq1.mrna1;geneID=comp116759_c0_seq1.path1;Name=comp116759_c0_seq1;Dir=indeterminatecoverage=96.0;identity=97.3;matches=357;mismatches=3;indels=7;unknowns=0;Target=comp116759_c0_seq1 375 16 .;CDS_Target=comp116759_c0_seq1 366 307 .;locus=RLOC_00002597
ChrX	stalkie_big_nohaplotig	exon	45104735	45105101	97	+	.	Parent=comp116759_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	45105033	45105092	.	+	0	Parent=comp116759_c0_seq1.mrna1
ChrX	gffcl	locus	45105371	45105818	.	-	.	ID=RLOC_00002598;geneIDs=comp155837_c0_seq1.path1;transcripts=comp155837_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45105371	45105818	.	-	.	ID=comp155837_c0_seq1.mrna1;geneID=comp155837_c0_seq1.path1;Name=comp155837_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=447;mismatches=1;indels=0;unknowns=0;Target=comp155837_c0_seq1 448 1 .;CDS_Target=comp155837_c0_seq1 129 70 .;locus=RLOC_00002598
ChrX	stalkie_big_nohaplotig	exon	45105371	45105818	99	-	.	Parent=comp155837_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	45105690	45105749	.	-	0	Parent=comp155837_c0_seq1.mrna1
ChrX	gffcl	locus	45111198	45112404	.	+	.	ID=RLOC_00002599;geneIDs=FBgn0086130.1.path1;transcripts=FBgn0086130.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45111198	45112404	.	+	.	ID=FBgn0086130.1.mrna1;geneID=FBgn0086130.1.path1;Name=FBgn0086130.1;Dir=sensecoverage=99.7;identity=100.0;matches=1142;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002599
ChrX	stalkie_big_nohaplotig	exon	45111198	45112043	100	+	.	Parent=FBgn0086130.1.mrna1;Target=FBgn0086130.1 1 846 +
ChrX	stalkie_big_nohaplotig	exon	45112109	45112404	100	+	.	Parent=FBgn0086130.1.mrna1;Target=FBgn0086130.1 847 1142 +
ChrX	stalkie_big_nohaplotig	CDS	45111198	45112043	.	+	0	Parent=FBgn0086130.1.mrna1;Target=FBgn0086130.1 1 846 +
ChrX	stalkie_big_nohaplotig	CDS	45112109	45112402	.	+	0	Parent=FBgn0086130.1.mrna1;Target=FBgn0086130.1 847 1140 +
ChrX	gffcl	locus	45112911	45120301	.	-	.	ID=RLOC_00002600;geneIDs=FBgn0031281.1.path1;transcripts=FBgn0031281.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45112911	45120301	.	-	.	ID=FBgn0031281.1.mrna1;geneID=FBgn0031281.1.path1;Name=FBgn0031281.1;Dir=sensecoverage=100.0;identity=100.0;matches=2159;mismatches=0;indels=1;unknowns=0;Target=FBgn0031281.1 3 98 +;locus=RLOC_00002600
ChrX	stalkie_big_nohaplotig	exon	45112911	45113413	100	-	.	Parent=FBgn0031281.1.mrna1;Target=FBgn0031281.1 1658 2160 +
ChrX	stalkie_big_nohaplotig	exon	45113477	45113582	100	-	.	Parent=FBgn0031281.1.mrna1;Target=FBgn0031281.1 1552 1657 +
ChrX	stalkie_big_nohaplotig	exon	45113640	45113770	100	-	.	Parent=FBgn0031281.1.mrna1;Target=FBgn0031281.1 1421 1551 +
ChrX	stalkie_big_nohaplotig	exon	45114563	45115273	100	-	.	Parent=FBgn0031281.1.mrna1;Target=FBgn0031281.1 710 1420 +
ChrX	stalkie_big_nohaplotig	exon	45119411	45119552	100	-	.	Parent=FBgn0031281.1.mrna1;Target=FBgn0031281.1 568 709 +
ChrX	stalkie_big_nohaplotig	exon	45119605	45119757	100	-	.	Parent=FBgn0031281.1.mrna1;Target=FBgn0031281.1 415 567 +
ChrX	stalkie_big_nohaplotig	exon	45119835	45119978	100	-	.	Parent=FBgn0031281.1.mrna1;Target=FBgn0031281.1 271 414 +
ChrX	stalkie_big_nohaplotig	exon	45120033	45120301	99	-	.	Parent=FBgn0031281.1.mrna1;Target=FBgn0031281.1 1 270 +
ChrX	stalkie_big_nohaplotig	CDS	45120205	45120299	.	-	0	Parent=FBgn0031281.1.mrna1
ChrX	gffcl	locus	45120559	45121470	.	+	.	ID=RLOC_00002601;geneIDs=FBgn0031282.1.path1;transcripts=FBgn0031282.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45120559	45121470	.	+	.	ID=FBgn0031282.1.mrna1;geneID=FBgn0031282.1.path1;Name=FBgn0031282.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=912;mismatches=0;indels=0;unknowns=0;Target=FBgn0031282.1 912 1 .;locus=RLOC_00002601
ChrX	stalkie_big_nohaplotig	exon	45120559	45121470	100	+	.	Parent=FBgn0031282.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	45120559	45121470	.	+	0	Parent=FBgn0031282.1.mrna1
ChrX	gffcl	locus	45122019	45124442	.	-	.	ID=RLOC_00002602;geneIDs=FBgn0031284.2.path1;transcripts=FBgn0031284.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45122019	45124442	.	-	.	ID=FBgn0031284.2.mrna1;geneID=FBgn0031284.2.path1;Name=FBgn0031284.2;Dir=sensecoverage=100.0;identity=100.0;matches=807;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002602
ChrX	stalkie_big_nohaplotig	exon	45122019	45122155	100	-	.	Parent=FBgn0031284.2.mrna1;Target=FBgn0031284.2 671 807 +
ChrX	stalkie_big_nohaplotig	exon	45123773	45124442	100	-	.	Parent=FBgn0031284.2.mrna1;Target=FBgn0031284.2 1 670 +
ChrX	stalkie_big_nohaplotig	CDS	45122019	45122155	.	-	2	Parent=FBgn0031284.2.mrna1;Target=FBgn0031284.2 671 807 +
ChrX	stalkie_big_nohaplotig	CDS	45123773	45124442	.	-	0	Parent=FBgn0031284.2.mrna1;Target=FBgn0031284.2 1 670 +
ChrX	gffcl	locus	45128896	45131783	.	-	.	ID=RLOC_00002603;geneIDs=ORF709.path1;transcripts=ORF709.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45128896	45131783	.	-	.	ID=ORF709.mrna1;geneID=ORF709.path1;Name=ORF709;Dir=sensecoverage=99.3;identity=100.0;matches=1493;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002603
ChrX	stalkie_big_nohaplotig	exon	45128896	45130110	100	-	.	Parent=ORF709.mrna1;Target=ORF709 279 1493 +
ChrX	stalkie_big_nohaplotig	exon	45131304	45131402	100	-	.	Parent=ORF709.mrna1;Target=ORF709 180 278 +
ChrX	stalkie_big_nohaplotig	exon	45131605	45131783	100	-	.	Parent=ORF709.mrna1;Target=ORF709 1 179 +
ChrX	stalkie_big_nohaplotig	CDS	45128898	45130110	.	-	1	Parent=ORF709.mrna1;Target=ORF709 279 1491 +
ChrX	stalkie_big_nohaplotig	CDS	45131304	45131402	.	-	1	Parent=ORF709.mrna1;Target=ORF709 180 278 +
ChrX	stalkie_big_nohaplotig	CDS	45131605	45131783	.	-	0	Parent=ORF709.mrna1;Target=ORF709 1 179 +
ChrX	stalkie_big_nohaplotig	mRNA	45133438	45133993	.	+	.	ID=comp151327_c0_seq1.mrna1;geneID=comp151327_c0_seq1.path1;Name=comp151327_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=549;mismatches=7;indels=0;unknowns=0;Target=comp151327_c0_seq1 556 1 .;CDS_Target=comp151327_c0_seq1 270 238 .;locus=RLOC_00002604
ChrX	stalkie_big_nohaplotig	exon	45133438	45133993	98	+	.	Parent=comp151327_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	45133675	45133707	.	+	0	Parent=comp151327_c0_seq1.mrna1
ChrX	gffcl	locus	45148642	45150101	.	-	.	ID=RLOC_00002606;geneIDs=FBgn0031286.1.path1;transcripts=FBgn0031286.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45148642	45150101	.	-	.	ID=FBgn0031286.1.mrna1;geneID=FBgn0031286.1.path1;Name=FBgn0031286.1;Dir=sensecoverage=100.0;identity=99.9;matches=1393;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002606
ChrX	stalkie_big_nohaplotig	exon	45148642	45149906	99	-	.	Parent=FBgn0031286.1.mrna1;Target=FBgn0031286.1 131 1395 +
ChrX	stalkie_big_nohaplotig	exon	45149972	45150101	100	-	.	Parent=FBgn0031286.1.mrna1;Target=FBgn0031286.1 1 130 +
ChrX	stalkie_big_nohaplotig	CDS	45148642	45149906	.	-	2	Parent=FBgn0031286.1.mrna1;Target=FBgn0031286.1 131 1395 +
ChrX	stalkie_big_nohaplotig	CDS	45149972	45150101	.	-	0	Parent=FBgn0031286.1.mrna1;Target=FBgn0031286.1 1 130 +
ChrX	gffcl	locus	45181643	45188899	.	+	.	ID=RLOC_00002607;geneIDs=FBgn0010583.1.path1;transcripts=FBgn0010583.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45181643	45188899	.	+	.	ID=FBgn0010583.1.mrna1;geneID=FBgn0010583.1.path1;Name=FBgn0010583.1;Dir=sensecoverage=100.0;identity=100.0;matches=1593;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002607
ChrX	stalkie_big_nohaplotig	exon	45181643	45182051	100	+	.	Parent=FBgn0010583.1.mrna1;Target=FBgn0010583.1 1 409 +
ChrX	stalkie_big_nohaplotig	exon	45182140	45182344	100	+	.	Parent=FBgn0010583.1.mrna1;Target=FBgn0010583.1 410 614 +
ChrX	stalkie_big_nohaplotig	exon	45186441	45186786	100	+	.	Parent=FBgn0010583.1.mrna1;Target=FBgn0010583.1 615 960 +
ChrX	stalkie_big_nohaplotig	exon	45186855	45187280	100	+	.	Parent=FBgn0010583.1.mrna1;Target=FBgn0010583.1 961 1386 +
ChrX	stalkie_big_nohaplotig	exon	45188693	45188899	100	+	.	Parent=FBgn0010583.1.mrna1;Target=FBgn0010583.1 1387 1593 +
ChrX	stalkie_big_nohaplotig	CDS	45181643	45182051	.	+	0	Parent=FBgn0010583.1.mrna1;Target=FBgn0010583.1 1 409 +
ChrX	stalkie_big_nohaplotig	CDS	45182140	45182344	.	+	2	Parent=FBgn0010583.1.mrna1;Target=FBgn0010583.1 410 614 +
ChrX	stalkie_big_nohaplotig	CDS	45186441	45186786	.	+	1	Parent=FBgn0010583.1.mrna1;Target=FBgn0010583.1 615 960 +
ChrX	stalkie_big_nohaplotig	CDS	45186855	45187280	.	+	0	Parent=FBgn0010583.1.mrna1;Target=FBgn0010583.1 961 1386 +
ChrX	stalkie_big_nohaplotig	CDS	45188693	45188899	.	+	0	Parent=FBgn0010583.1.mrna1;Target=FBgn0010583.1 1387 1593 +
ChrX	gffcl	locus	45190047	45190765	.	-	.	ID=RLOC_00002608;geneIDs=comp56340_c0_seq1.path1;transcripts=comp56340_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45190047	45190765	.	-	.	ID=comp56340_c0_seq1.mrna1;geneID=comp56340_c0_seq1.path1;Name=comp56340_c0_seq1;Dir=indeterminatecoverage=99.0;identity=100.0;matches=719;mismatches=0;indels=0;unknowns=0;Target=comp56340_c0_seq1 719 1 .;CDS_Target=comp56340_c0_seq1 505 386 .;locus=RLOC_00002608
ChrX	stalkie_big_nohaplotig	exon	45190047	45190765	100	-	.	Parent=comp56340_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	45190261	45190380	.	-	0	Parent=comp56340_c0_seq1.mrna1
ChrX	gffcl	locus	45196152	45198040	.	-	.	ID=RLOC_00002609;geneIDs=comp150365_c0_seq1.path1;transcripts=comp150365_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45196152	45198040	.	-	.	ID=comp150365_c0_seq1.mrna1;geneID=comp150365_c0_seq1.path1;Name=comp150365_c0_seq1;Dir=sensecoverage=99.8;identity=98.6;matches=554;mismatches=2;indels=6;unknowns=0;locus=RLOC_00002609
ChrX	stalkie_big_nohaplotig	exon	45196152	45196339	95	-	.	Parent=comp150365_c0_seq1.mrna1;Target=comp150365_c0_seq1 369 562 +
ChrX	stalkie_big_nohaplotig	exon	45197673	45198040	100	-	.	Parent=comp150365_c0_seq1.mrna1;Target=comp150365_c0_seq1 1 368 +
ChrX	stalkie_big_nohaplotig	CDS	45196267	45196339	.	-	1	Parent=comp150365_c0_seq1.mrna1;Target=comp150365_c0_seq1 369 447 +
ChrX	stalkie_big_nohaplotig	CDS	45197673	45197845	.	-	0	Parent=comp150365_c0_seq1.mrna1;Target=comp150365_c0_seq1 196 368 +
ChrX	gffcl	locus	45224537	45232786	.	-	.	ID=RLOC_00002610;geneIDs=FBgn0001313.1.path1;transcripts=FBgn0001313.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45224537	45232786	.	-	.	ID=FBgn0001313.1.mrna1;geneID=FBgn0001313.1.path1;Name=FBgn0001313.1;Dir=sensecoverage=100.0;identity=100.0;matches=7761;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002610
ChrX	stalkie_big_nohaplotig	exon	45224537	45225081	100	-	.	Parent=FBgn0001313.1.mrna1;Target=FBgn0001313.1 7217 7761 +
ChrX	stalkie_big_nohaplotig	exon	45225140	45225630	100	-	.	Parent=FBgn0001313.1.mrna1;Target=FBgn0001313.1 6726 7216 +
ChrX	stalkie_big_nohaplotig	exon	45225683	45226625	100	-	.	Parent=FBgn0001313.1.mrna1;Target=FBgn0001313.1 5783 6725 +
ChrX	stalkie_big_nohaplotig	exon	45226678	45226782	100	-	.	Parent=FBgn0001313.1.mrna1;Target=FBgn0001313.1 5678 5782 +
ChrX	stalkie_big_nohaplotig	exon	45226846	45228200	100	-	.	Parent=FBgn0001313.1.mrna1;Target=FBgn0001313.1 4323 5677 +
ChrX	stalkie_big_nohaplotig	exon	45228349	45230870	100	-	.	Parent=FBgn0001313.1.mrna1;Target=FBgn0001313.1 1801 4322 +
ChrX	stalkie_big_nohaplotig	exon	45230931	45231129	100	-	.	Parent=FBgn0001313.1.mrna1;Target=FBgn0001313.1 1602 1800 +
ChrX	stalkie_big_nohaplotig	exon	45231186	45232786	100	-	.	Parent=FBgn0001313.1.mrna1;Target=FBgn0001313.1 1 1601 +
ChrX	stalkie_big_nohaplotig	CDS	45224537	45225081	.	-	2	Parent=FBgn0001313.1.mrna1;Target=FBgn0001313.1 7217 7761 +
ChrX	stalkie_big_nohaplotig	CDS	45225140	45225630	.	-	1	Parent=FBgn0001313.1.mrna1;Target=FBgn0001313.1 6726 7216 +
ChrX	stalkie_big_nohaplotig	CDS	45225683	45226625	.	-	2	Parent=FBgn0001313.1.mrna1;Target=FBgn0001313.1 5783 6725 +
ChrX	stalkie_big_nohaplotig	CDS	45226678	45226782	.	-	2	Parent=FBgn0001313.1.mrna1;Target=FBgn0001313.1 5678 5782 +
ChrX	stalkie_big_nohaplotig	CDS	45226846	45228200	.	-	1	Parent=FBgn0001313.1.mrna1;Target=FBgn0001313.1 4323 5677 +
ChrX	stalkie_big_nohaplotig	CDS	45228349	45230870	.	-	0	Parent=FBgn0001313.1.mrna1;Target=FBgn0001313.1 1801 4322 +
ChrX	stalkie_big_nohaplotig	CDS	45230931	45231129	.	-	1	Parent=FBgn0001313.1.mrna1;Target=FBgn0001313.1 1602 1800 +
ChrX	stalkie_big_nohaplotig	CDS	45231186	45232786	.	-	0	Parent=FBgn0001313.1.mrna1;Target=FBgn0001313.1 1 1601 +
ChrX	gffcl	locus	45245637	45246392	.	-	.	ID=RLOC_00002611;geneIDs=comp115570_c0_seq1.path1;transcripts=comp115570_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45245637	45246392	.	-	.	ID=comp115570_c0_seq1.mrna1;geneID=comp115570_c0_seq1.path1;Name=comp115570_c0_seq1;Dir=sensecoverage=99.7;identity=100.0;matches=693;mismatches=0;indels=0;unknowns=0;Target=comp115570_c0_seq1 177 563 +;locus=RLOC_00002611
ChrX	stalkie_big_nohaplotig	exon	45245637	45246197	100	-	.	Parent=comp115570_c0_seq1.mrna1;Target=comp115570_c0_seq1 134 694 +
ChrX	stalkie_big_nohaplotig	exon	45246261	45246392	100	-	.	Parent=comp115570_c0_seq1.mrna1;Target=comp115570_c0_seq1 2 133 +
ChrX	stalkie_big_nohaplotig	CDS	45245768	45246154	.	-	0	Parent=comp115570_c0_seq1.mrna1
ChrX	gffcl	locus	45250901	45251573	.	+	.	ID=RLOC_00002612;geneIDs=comp153231_c0_seq1.path1;transcripts=comp153231_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45250901	45251573	.	+	.	ID=comp153231_c0_seq1.mrna1;geneID=comp153231_c0_seq1.path1;Name=comp153231_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=663;mismatches=9;indels=2;unknowns=0;Target=comp153231_c0_seq1 673 1 .;CDS_Target=comp153231_c0_seq1 540 160 .;locus=RLOC_00002612
ChrX	stalkie_big_nohaplotig	exon	45250901	45251573	98	+	.	Parent=comp153231_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	45251060	45251440	.	+	0	Parent=comp153231_c0_seq1.mrna1
ChrX	gffcl	locus	45258739	45259341	.	+	.	ID=RLOC_00002613;geneIDs=comp151975_c0_seq1.path1;transcripts=comp151975_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45258739	45259341	.	+	.	ID=comp151975_c0_seq1.mrna1;geneID=comp151975_c0_seq1.path1;Name=comp151975_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.7;matches=601;mismatches=2;indels=0;unknowns=0;Target=comp151975_c0_seq1 604 2 .;CDS_Target=comp151975_c0_seq1 236 3 .;locus=RLOC_00002613
ChrX	stalkie_big_nohaplotig	exon	45258739	45259341	99	+	.	Parent=comp151975_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	45258740	45258973	.	+	0	Parent=comp151975_c0_seq1.mrna1
ChrX	gffcl	locus	45551124	45632679	.	+	.	ID=RLOC_00002614;geneIDs=FBgn0053126.3.path1,comp145699_c0_seq1.path1;transcripts=comp145699_c0_seq1.mrna1,FBgn0053126.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45551124	45632679	.	+	.	ID=comp145699_c0_seq1.mrna1;geneID=comp145699_c0_seq1.path1;Name=comp145699_c0_seq1;Dir=indeterminatecoverage=72.4;identity=97.3;matches=427;mismatches=5;indels=7;unknowns=0;locus=RLOC_00002614
ChrX	stalkie_big_nohaplotig	exon	45551124	45551127	36	+	.	Parent=comp145699_c0_seq1.mrna1;Target=comp145699_c0_seq1 201 191 .
ChrX	stalkie_big_nohaplotig	exon	45555111	45555114	100	+	.	Parent=comp145699_c0_seq1.mrna1;Target=comp145699_c0_seq1 205 202 .
ChrX	stalkie_big_nohaplotig	exon	45562699	45562706	100	+	.	Parent=comp145699_c0_seq1.mrna1;Target=comp145699_c0_seq1 213 206 .
ChrX	stalkie_big_nohaplotig	exon	45562720	45562727	100	+	.	Parent=comp145699_c0_seq1.mrna1;Target=comp145699_c0_seq1 266 259 .
ChrX	stalkie_big_nohaplotig	exon	45570227	45570229	100	+	.	Parent=comp145699_c0_seq1.mrna1;Target=comp145699_c0_seq1 269 267 .
ChrX	stalkie_big_nohaplotig	exon	45570766	45570767	100	+	.	Parent=comp145699_c0_seq1.mrna1;Target=comp145699_c0_seq1 271 270 .
ChrX	stalkie_big_nohaplotig	exon	45594840	45594842	100	+	.	Parent=comp145699_c0_seq1.mrna1;Target=comp145699_c0_seq1 274 272 .
ChrX	stalkie_big_nohaplotig	exon	45601166	45601170	100	+	.	Parent=comp145699_c0_seq1.mrna1;Target=comp145699_c0_seq1 279 275 .
ChrX	stalkie_big_nohaplotig	exon	45604010	45604017	100	+	.	Parent=comp145699_c0_seq1.mrna1;Target=comp145699_c0_seq1 287 280 .
ChrX	stalkie_big_nohaplotig	exon	45607693	45607694	100	+	.	Parent=comp145699_c0_seq1.mrna1;Target=comp145699_c0_seq1 289 288 .
ChrX	stalkie_big_nohaplotig	exon	45613397	45613407	100	+	.	Parent=comp145699_c0_seq1.mrna1;Target=comp145699_c0_seq1 300 290 .
ChrX	stalkie_big_nohaplotig	exon	45615562	45615577	81	+	.	Parent=comp145699_c0_seq1.mrna1;Target=comp145699_c0_seq1 316 301 .
ChrX	stalkie_big_nohaplotig	exon	45620183	45620190	100	+	.	Parent=comp145699_c0_seq1.mrna1;Target=comp145699_c0_seq1 332 325 .
ChrX	stalkie_big_nohaplotig	exon	45632332	45632679	99	+	.	Parent=comp145699_c0_seq1.mrna1;Target=comp145699_c0_seq1 693 346 .
ChrX	stalkie_big_nohaplotig	CDS	45551125	45551127	.	+	0	Parent=comp145699_c0_seq1.mrna1;Target=comp145699_c0_seq1 201 192 .
ChrX	stalkie_big_nohaplotig	CDS	45555111	45555114	.	+	0	Parent=comp145699_c0_seq1.mrna1;Target=comp145699_c0_seq1 205 202 .
ChrX	stalkie_big_nohaplotig	CDS	45562699	45562706	.	+	2	Parent=comp145699_c0_seq1.mrna1;Target=comp145699_c0_seq1 213 206 .
ChrX	stalkie_big_nohaplotig	CDS	45562720	45562724	.	+	0	Parent=comp145699_c0_seq1.mrna1;Target=comp145699_c0_seq1 263 259 .
ChrX	stalkie_big_nohaplotig	mRNA	45609161	45620291	.	+	.	ID=FBgn0053126.3.mrna1;geneID=FBgn0053126.3.path1;Name=FBgn0053126.3;Dir=sensecoverage=100.0;identity=99.5;matches=570;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002614
ChrX	stalkie_big_nohaplotig	exon	45609161	45609183	100	+	.	Parent=FBgn0053126.3.mrna1;Target=FBgn0053126.3 1 23 +
ChrX	stalkie_big_nohaplotig	exon	45609271	45609382	99	+	.	Parent=FBgn0053126.3.mrna1;Target=FBgn0053126.3 24 135 +
ChrX	stalkie_big_nohaplotig	exon	45609442	45609572	100	+	.	Parent=FBgn0053126.3.mrna1;Target=FBgn0053126.3 136 266 +
ChrX	stalkie_big_nohaplotig	exon	45609648	45609730	100	+	.	Parent=FBgn0053126.3.mrna1;Target=FBgn0053126.3 267 349 +
ChrX	stalkie_big_nohaplotig	exon	45613535	45613624	98	+	.	Parent=FBgn0053126.3.mrna1;Target=FBgn0053126.3 350 439 +
ChrX	stalkie_big_nohaplotig	exon	45620158	45620291	99	+	.	Parent=FBgn0053126.3.mrna1;Target=FBgn0053126.3 440 573 +
ChrX	stalkie_big_nohaplotig	CDS	45609161	45609183	.	+	0	Parent=FBgn0053126.3.mrna1;Target=FBgn0053126.3 1 23 +
ChrX	stalkie_big_nohaplotig	CDS	45609271	45609382	.	+	1	Parent=FBgn0053126.3.mrna1;Target=FBgn0053126.3 24 135 +
ChrX	stalkie_big_nohaplotig	CDS	45609442	45609572	.	+	0	Parent=FBgn0053126.3.mrna1;Target=FBgn0053126.3 136 266 +
ChrX	stalkie_big_nohaplotig	CDS	45609648	45609730	.	+	1	Parent=FBgn0053126.3.mrna1;Target=FBgn0053126.3 267 349 +
ChrX	stalkie_big_nohaplotig	CDS	45613535	45613624	.	+	2	Parent=FBgn0053126.3.mrna1;Target=FBgn0053126.3 350 439 +
ChrX	stalkie_big_nohaplotig	CDS	45620158	45620291	.	+	2	Parent=FBgn0053126.3.mrna1;Target=FBgn0053126.3 440 573 +
ChrX	gffcl	locus	45626564	45635058	.	+	.	ID=RLOC_00002615;geneIDs=FBgn0053126.1.path1;transcripts=FBgn0053126.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45626564	45635058	.	+	.	ID=FBgn0053126.1.mrna1;geneID=FBgn0053126.1.path1;Name=FBgn0053126.1;Dir=sensecoverage=100.0;identity=100.0;matches=738;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002615
ChrX	stalkie_big_nohaplotig	exon	45626564	45626586	100	+	.	Parent=FBgn0053126.1.mrna1;Target=FBgn0053126.1 1 23 +
ChrX	stalkie_big_nohaplotig	exon	45626863	45626959	100	+	.	Parent=FBgn0053126.1.mrna1;Target=FBgn0053126.1 24 120 +
ChrX	stalkie_big_nohaplotig	exon	45631975	45632105	100	+	.	Parent=FBgn0053126.1.mrna1;Target=FBgn0053126.1 121 251 +
ChrX	stalkie_big_nohaplotig	exon	45633243	45633322	100	+	.	Parent=FBgn0053126.1.mrna1;Target=FBgn0053126.1 252 331 +
ChrX	stalkie_big_nohaplotig	exon	45633391	45633489	100	+	.	Parent=FBgn0053126.1.mrna1;Target=FBgn0053126.1 332 430 +
ChrX	stalkie_big_nohaplotig	exon	45634751	45635058	100	+	.	Parent=FBgn0053126.1.mrna1;Target=FBgn0053126.1 431 738 +
ChrX	stalkie_big_nohaplotig	CDS	45626564	45626586	.	+	0	Parent=FBgn0053126.1.mrna1;Target=FBgn0053126.1 1 23 +
ChrX	stalkie_big_nohaplotig	CDS	45626863	45626959	.	+	1	Parent=FBgn0053126.1.mrna1;Target=FBgn0053126.1 24 120 +
ChrX	stalkie_big_nohaplotig	CDS	45631975	45632105	.	+	0	Parent=FBgn0053126.1.mrna1;Target=FBgn0053126.1 121 251 +
ChrX	stalkie_big_nohaplotig	CDS	45633243	45633322	.	+	1	Parent=FBgn0053126.1.mrna1;Target=FBgn0053126.1 252 331 +
ChrX	stalkie_big_nohaplotig	CDS	45633391	45633489	.	+	2	Parent=FBgn0053126.1.mrna1;Target=FBgn0053126.1 332 430 +
ChrX	stalkie_big_nohaplotig	CDS	45634751	45635058	.	+	2	Parent=FBgn0053126.1.mrna1;Target=FBgn0053126.1 431 738 +
ChrX	gffcl	locus	45633781	45634227	.	+	.	ID=RLOC_00002616;geneIDs=comp149832_c1_seq1.path1;transcripts=comp149832_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45633781	45634227	.	+	.	ID=comp149832_c1_seq1.mrna1;geneID=comp149832_c1_seq1.path1;Name=comp149832_c1_seq1;Dir=indeterminatecoverage=94.1;identity=99.6;matches=445;mismatches=2;indels=0;unknowns=0;Target=comp149832_c1_seq1 475 29 .;CDS_Target=comp149832_c1_seq1 163 29 .;locus=RLOC_00002616
ChrX	stalkie_big_nohaplotig	exon	45633781	45634227	99	+	.	Parent=comp149832_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	45633781	45633915	.	+	0	Parent=comp149832_c1_seq1.mrna1
ChrX	gffcl	locus	45650042	45653196	.	+	.	ID=RLOC_00002617;geneIDs=comp154254_c0_seq1.path1;transcripts=comp154254_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45650042	45653196	.	+	.	ID=comp154254_c0_seq1.mrna1;geneID=comp154254_c0_seq1.path1;Name=comp154254_c0_seq1;Dir=antisensecoverage=98.2;identity=99.2;matches=1435;mismatches=12;indels=0;unknowns=0;locus=RLOC_00002617
ChrX	stalkie_big_nohaplotig	exon	45650042	45650240	100	+	.	Parent=comp154254_c0_seq1.mrna1;Target=comp154254_c0_seq1 1249 1447 -
ChrX	stalkie_big_nohaplotig	exon	45650792	45650818	100	+	.	Parent=comp154254_c0_seq1.mrna1;Target=comp154254_c0_seq1 1222 1248 -
ChrX	stalkie_big_nohaplotig	exon	45650880	45651011	96	+	.	Parent=comp154254_c0_seq1.mrna1;Target=comp154254_c0_seq1 1090 1221 -
ChrX	stalkie_big_nohaplotig	exon	45651142	45651487	99	+	.	Parent=comp154254_c0_seq1.mrna1;Target=comp154254_c0_seq1 744 1089 -
ChrX	stalkie_big_nohaplotig	exon	45652371	45652552	99	+	.	Parent=comp154254_c0_seq1.mrna1;Target=comp154254_c0_seq1 562 743 -
ChrX	stalkie_big_nohaplotig	exon	45652636	45653196	98	+	.	Parent=comp154254_c0_seq1.mrna1;Target=comp154254_c0_seq1 1 561 -
ChrX	stalkie_big_nohaplotig	CDS	45650042	45650240	.	+	0	Parent=comp154254_c0_seq1.mrna1;Target=comp154254_c0_seq1 1249 1447 .
ChrX	stalkie_big_nohaplotig	CDS	45650792	45650818	.	+	2	Parent=comp154254_c0_seq1.mrna1;Target=comp154254_c0_seq1 1222 1248 .
ChrX	stalkie_big_nohaplotig	CDS	45650880	45651011	.	+	2	Parent=comp154254_c0_seq1.mrna1;Target=comp154254_c0_seq1 1090 1221 .
ChrX	stalkie_big_nohaplotig	CDS	45651142	45651440	.	+	2	Parent=comp154254_c0_seq1.mrna1;Target=comp154254_c0_seq1 791 1089 .
ChrX	gffcl	locus	45700562	45702946	.	-	.	ID=RLOC_00002618;geneIDs=comp76240_c0_seq1.path1;transcripts=comp76240_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45700562	45702946	.	-	.	ID=comp76240_c0_seq1.mrna1;geneID=comp76240_c0_seq1.path1;Name=comp76240_c0_seq1;Dir=sensecoverage=100.0;identity=98.1;matches=1791;mismatches=28;indels=6;unknowns=0;Target=comp76240_c0_seq1 324 464 +;locus=RLOC_00002618
ChrX	stalkie_big_nohaplotig	exon	45700562	45700623	87	-	.	Parent=comp76240_c0_seq1.mrna1;Target=comp76240_c0_seq1 1760 1823 +
ChrX	stalkie_big_nohaplotig	exon	45701127	45701442	98	-	.	Parent=comp76240_c0_seq1.mrna1;Target=comp76240_c0_seq1 1444 1759 +
ChrX	stalkie_big_nohaplotig	exon	45701504	45702946	98	-	.	Parent=comp76240_c0_seq1.mrna1;Target=comp76240_c0_seq1 1 1443 +
ChrX	stalkie_big_nohaplotig	CDS	45702481	45702621	.	-	0	Parent=comp76240_c0_seq1.mrna1
ChrX	gffcl	locus	45714684	45841257	.	+	.	ID=RLOC_00002619;geneIDs=FBgn0041097.1.path1;transcripts=FBgn0041097.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45714684	45841257	.	+	.	ID=FBgn0041097.1.mrna1;geneID=FBgn0041097.1.path1;Name=FBgn0041097.1;Dir=sensecoverage=100.0;identity=99.9;matches=3805;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002619
ChrX	stalkie_big_nohaplotig	exon	45714684	45714804	100	+	.	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 1 121 +
ChrX	stalkie_big_nohaplotig	exon	45792434	45792627	100	+	.	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 122 315 +
ChrX	stalkie_big_nohaplotig	exon	45814585	45814687	100	+	.	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 316 418 +
ChrX	stalkie_big_nohaplotig	exon	45825497	45825781	100	+	.	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 419 703 +
ChrX	stalkie_big_nohaplotig	exon	45826359	45826499	100	+	.	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 704 844 +
ChrX	stalkie_big_nohaplotig	exon	45827131	45827262	100	+	.	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 845 976 +
ChrX	stalkie_big_nohaplotig	exon	45827356	45828675	100	+	.	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 977 2296 +
ChrX	stalkie_big_nohaplotig	exon	45828975	45829073	100	+	.	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 2297 2395 +
ChrX	stalkie_big_nohaplotig	exon	45829255	45829495	100	+	.	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 2396 2636 +
ChrX	stalkie_big_nohaplotig	exon	45829835	45829995	100	+	.	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 2637 2797 +
ChrX	stalkie_big_nohaplotig	exon	45832369	45832549	100	+	.	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 2798 2978 +
ChrX	stalkie_big_nohaplotig	exon	45840429	45841257	99	+	.	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 2979 3807 +
ChrX	stalkie_big_nohaplotig	CDS	45714684	45714804	.	+	0	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 1 121 +
ChrX	stalkie_big_nohaplotig	CDS	45792434	45792627	.	+	2	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 122 315 +
ChrX	stalkie_big_nohaplotig	CDS	45814585	45814687	.	+	0	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 316 418 +
ChrX	stalkie_big_nohaplotig	CDS	45825497	45825781	.	+	2	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 419 703 +
ChrX	stalkie_big_nohaplotig	CDS	45826359	45826499	.	+	2	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 704 844 +
ChrX	stalkie_big_nohaplotig	CDS	45827131	45827262	.	+	2	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 845 976 +
ChrX	stalkie_big_nohaplotig	CDS	45827356	45828675	.	+	2	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 977 2296 +
ChrX	stalkie_big_nohaplotig	CDS	45828975	45829073	.	+	2	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 2297 2395 +
ChrX	stalkie_big_nohaplotig	CDS	45829255	45829495	.	+	2	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 2396 2636 +
ChrX	stalkie_big_nohaplotig	CDS	45829835	45829995	.	+	1	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 2637 2797 +
ChrX	stalkie_big_nohaplotig	CDS	45832369	45832549	.	+	2	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 2798 2978 +
ChrX	stalkie_big_nohaplotig	CDS	45840429	45841257	.	+	1	Parent=FBgn0041097.1.mrna1;Target=FBgn0041097.1 2979 3807 +
ChrX	gffcl	locus	45842783	45845502	.	+	.	ID=RLOC_00002620;geneIDs=comp155196_c0_seq1.path1,comp159659_c0_seq1.path1;transcripts=comp159659_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45842783	45844460	.	+	.	ID=comp159659_c0_seq1.mrna1;geneID=comp159659_c0_seq1.path1;Name=comp159659_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.3;matches=1667;mismatches=11;indels=0;unknowns=0;Target=comp159659_c0_seq1 1697 20 .;CDS_Target=comp159659_c0_seq1 641 516 .;locus=RLOC_00002620
ChrX	stalkie_big_nohaplotig	exon	45842783	45844460	99	+	.	Parent=comp159659_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	45843279	45843404	.	+	0	Parent=comp159659_c0_seq1.mrna1
ChrX	gffcl	locus	45870179	45872066	.	+	.	ID=RLOC_00002621;geneIDs=FBgn0034506.1.path1;transcripts=FBgn0034506.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45870179	45872066	.	+	.	ID=FBgn0034506.1.mrna1;geneID=FBgn0034506.1.path1;Name=FBgn0034506.1;Dir=sensecoverage=100.0;identity=99.9;matches=1625;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002621
ChrX	stalkie_big_nohaplotig	exon	45870179	45870326	100	+	.	Parent=FBgn0034506.1.mrna1;Target=FBgn0034506.1 1 148 +
ChrX	stalkie_big_nohaplotig	exon	45870398	45870484	100	+	.	Parent=FBgn0034506.1.mrna1;Target=FBgn0034506.1 149 235 +
ChrX	stalkie_big_nohaplotig	exon	45870546	45870872	100	+	.	Parent=FBgn0034506.1.mrna1;Target=FBgn0034506.1 236 562 +
ChrX	stalkie_big_nohaplotig	exon	45870931	45871048	100	+	.	Parent=FBgn0034506.1.mrna1;Target=FBgn0034506.1 563 680 +
ChrX	stalkie_big_nohaplotig	exon	45871121	45872066	99	+	.	Parent=FBgn0034506.1.mrna1;Target=FBgn0034506.1 681 1626 +
ChrX	stalkie_big_nohaplotig	CDS	45870179	45870326	.	+	0	Parent=FBgn0034506.1.mrna1;Target=FBgn0034506.1 1 148 +
ChrX	stalkie_big_nohaplotig	CDS	45870398	45870484	.	+	2	Parent=FBgn0034506.1.mrna1;Target=FBgn0034506.1 149 235 +
ChrX	stalkie_big_nohaplotig	CDS	45870546	45870872	.	+	2	Parent=FBgn0034506.1.mrna1;Target=FBgn0034506.1 236 562 +
ChrX	stalkie_big_nohaplotig	CDS	45870931	45871048	.	+	2	Parent=FBgn0034506.1.mrna1;Target=FBgn0034506.1 563 680 +
ChrX	stalkie_big_nohaplotig	CDS	45871121	45872066	.	+	1	Parent=FBgn0034506.1.mrna1;Target=FBgn0034506.1 681 1626 +
ChrX	gffcl	locus	45920790	45925535	.	-	.	ID=RLOC_00002622;geneIDs=FBgn0031327.1.path1;transcripts=FBgn0031327.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45920790	45925535	.	-	.	ID=FBgn0031327.1.mrna1;geneID=FBgn0031327.1.path1;Name=FBgn0031327.1;Dir=sensecoverage=100.0;identity=99.8;matches=2123;mismatches=4;indels=0;unknowns=0;locus=RLOC_00002622
ChrX	stalkie_big_nohaplotig	exon	45920790	45921527	99	-	.	Parent=FBgn0031327.1.mrna1;Target=FBgn0031327.1 1390 2127 +
ChrX	stalkie_big_nohaplotig	exon	45924080	45924541	100	-	.	Parent=FBgn0031327.1.mrna1;Target=FBgn0031327.1 928 1389 +
ChrX	stalkie_big_nohaplotig	exon	45924609	45925535	99	-	.	Parent=FBgn0031327.1.mrna1;Target=FBgn0031327.1 1 927 +
ChrX	stalkie_big_nohaplotig	CDS	45920790	45921527	.	-	0	Parent=FBgn0031327.1.mrna1;Target=FBgn0031327.1 1390 2127 +
ChrX	stalkie_big_nohaplotig	CDS	45924080	45924541	.	-	0	Parent=FBgn0031327.1.mrna1;Target=FBgn0031327.1 928 1389 +
ChrX	stalkie_big_nohaplotig	CDS	45924609	45925535	.	-	0	Parent=FBgn0031327.1.mrna1;Target=FBgn0031327.1 1 927 +
ChrX	gffcl	locus	45983257	45984942	.	+	.	ID=RLOC_00002624;geneIDs=comp155926_c0_seq1.path1;transcripts=comp155926_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45983257	45984942	.	+	.	ID=comp155926_c0_seq1.mrna1;geneID=comp155926_c0_seq1.path1;Name=comp155926_c0_seq1;Dir=sensecoverage=100.0;identity=98.5;matches=662;mismatches=9;indels=1;unknowns=0;locus=RLOC_00002624
ChrX	stalkie_big_nohaplotig	exon	45983257	45983348	100	+	.	Parent=comp155926_c0_seq1.mrna1;Target=comp155926_c0_seq1 1 92 +
ChrX	stalkie_big_nohaplotig	exon	45983894	45984002	99	+	.	Parent=comp155926_c0_seq1.mrna1;Target=comp155926_c0_seq1 93 201 +
ChrX	stalkie_big_nohaplotig	exon	45984070	45984203	99	+	.	Parent=comp155926_c0_seq1.mrna1;Target=comp155926_c0_seq1 202 335 +
ChrX	stalkie_big_nohaplotig	exon	45984607	45984942	97	+	.	Parent=comp155926_c0_seq1.mrna1;Target=comp155926_c0_seq1 336 672 +
ChrX	stalkie_big_nohaplotig	CDS	45983897	45984002	.	+	0	Parent=comp155926_c0_seq1.mrna1;Target=comp155926_c0_seq1 96 201 +
ChrX	stalkie_big_nohaplotig	CDS	45984070	45984203	.	+	2	Parent=comp155926_c0_seq1.mrna1;Target=comp155926_c0_seq1 202 335 +
ChrX	stalkie_big_nohaplotig	CDS	45984607	45984714	.	+	0	Parent=comp155926_c0_seq1.mrna1;Target=comp155926_c0_seq1 336 443 +
ChrX	gffcl	locus	45995740	45996889	.	+	.	ID=RLOC_00002625;geneIDs=comp135347_c0_seq1.path1;transcripts=comp135347_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45995740	45996889	.	+	.	ID=comp135347_c0_seq1.mrna1;geneID=comp135347_c0_seq1.path1;Name=comp135347_c0_seq1;Dir=sensecoverage=99.8;identity=99.2;matches=629;mismatches=5;indels=0;unknowns=0;locus=RLOC_00002625
ChrX	stalkie_big_nohaplotig	exon	45995740	45995972	98	+	.	Parent=comp135347_c0_seq1.mrna1;Target=comp135347_c0_seq1 2 234 +
ChrX	stalkie_big_nohaplotig	exon	45996033	45996126	100	+	.	Parent=comp135347_c0_seq1.mrna1;Target=comp135347_c0_seq1 235 328 +
ChrX	stalkie_big_nohaplotig	exon	45996185	45996329	100	+	.	Parent=comp135347_c0_seq1.mrna1;Target=comp135347_c0_seq1 329 473 +
ChrX	stalkie_big_nohaplotig	exon	45996728	45996889	99	+	.	Parent=comp135347_c0_seq1.mrna1;Target=comp135347_c0_seq1 474 635 +
ChrX	stalkie_big_nohaplotig	CDS	45995949	45995972	.	+	0	Parent=comp135347_c0_seq1.mrna1;Target=comp135347_c0_seq1 211 234 +
ChrX	stalkie_big_nohaplotig	CDS	45996033	45996126	.	+	0	Parent=comp135347_c0_seq1.mrna1;Target=comp135347_c0_seq1 235 328 +
ChrX	stalkie_big_nohaplotig	CDS	45996185	45996329	.	+	2	Parent=comp135347_c0_seq1.mrna1;Target=comp135347_c0_seq1 329 473 +
ChrX	stalkie_big_nohaplotig	CDS	45996728	45996851	.	+	1	Parent=comp135347_c0_seq1.mrna1;Target=comp135347_c0_seq1 474 597 +
ChrX	gffcl	locus	45999560	46002186	.	+	.	ID=RLOC_00002626;geneIDs=FBgn0025640.3.path1,comp139972_c1_seq1.path1;transcripts=FBgn0025640.3.mrna1,comp139972_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	45999560	46002186	.	+	.	ID=FBgn0025640.3.mrna1;geneID=FBgn0025640.3.path1;Name=FBgn0025640.3;Dir=sensecoverage=100.0;identity=99.8;matches=997;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002626
ChrX	stalkie_big_nohaplotig	exon	45999560	45999654	100	+	.	Parent=FBgn0025640.3.mrna1;Target=FBgn0025640.3 1 95 +
ChrX	stalkie_big_nohaplotig	exon	45999711	45999843	100	+	.	Parent=FBgn0025640.3.mrna1;Target=FBgn0025640.3 96 228 +
ChrX	stalkie_big_nohaplotig	exon	46001249	46001338	100	+	.	Parent=FBgn0025640.3.mrna1;Target=FBgn0025640.3 229 318 +
ChrX	stalkie_big_nohaplotig	exon	46001395	46001523	100	+	.	Parent=FBgn0025640.3.mrna1;Target=FBgn0025640.3 319 447 +
ChrX	stalkie_big_nohaplotig	exon	46001578	46001774	100	+	.	Parent=FBgn0025640.3.mrna1;Target=FBgn0025640.3 448 644 +
ChrX	stalkie_big_nohaplotig	exon	46001832	46002186	99	+	.	Parent=FBgn0025640.3.mrna1;Target=FBgn0025640.3 645 999 +
ChrX	stalkie_big_nohaplotig	CDS	45999560	45999654	.	+	0	Parent=FBgn0025640.3.mrna1;Target=FBgn0025640.3 1 95 +
ChrX	stalkie_big_nohaplotig	CDS	45999711	45999843	.	+	1	Parent=FBgn0025640.3.mrna1;Target=FBgn0025640.3 96 228 +
ChrX	stalkie_big_nohaplotig	CDS	46001249	46001338	.	+	0	Parent=FBgn0025640.3.mrna1;Target=FBgn0025640.3 229 318 +
ChrX	stalkie_big_nohaplotig	CDS	46001395	46001523	.	+	0	Parent=FBgn0025640.3.mrna1;Target=FBgn0025640.3 319 447 +
ChrX	stalkie_big_nohaplotig	CDS	46001578	46001774	.	+	0	Parent=FBgn0025640.3.mrna1;Target=FBgn0025640.3 448 644 +
ChrX	stalkie_big_nohaplotig	CDS	46001832	46002186	.	+	1	Parent=FBgn0025640.3.mrna1;Target=FBgn0025640.3 645 999 +
ChrX	stalkie_big_nohaplotig	mRNA	45999821	46000305	.	+	.	ID=comp139972_c1_seq1.mrna1;geneID=comp139972_c1_seq1.path1;Name=comp139972_c1_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=484;mismatches=1;indels=0;unknowns=0;Target=comp139972_c1_seq1 485 1 .;CDS_Target=comp139972_c1_seq1 169 2 .;locus=RLOC_00002626
ChrX	stalkie_big_nohaplotig	exon	45999821	46000305	99	+	.	Parent=comp139972_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	45999822	45999989	.	+	0	Parent=comp139972_c1_seq1.mrna1
ChrX	gffcl	locus	46017914	46023794	.	-	.	ID=RLOC_00002627;geneIDs=FBgn0031322.1.path1;transcripts=FBgn0031322.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46017914	46023794	.	-	.	ID=FBgn0031322.1.mrna1;geneID=FBgn0031322.1.path1;Name=FBgn0031322.1;Dir=sensecoverage=100.0;identity=99.9;matches=1067;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002627
ChrX	stalkie_big_nohaplotig	exon	46017914	46018138	99	-	.	Parent=FBgn0031322.1.mrna1;Target=FBgn0031322.1 844 1068 +
ChrX	stalkie_big_nohaplotig	exon	46022812	46023181	100	-	.	Parent=FBgn0031322.1.mrna1;Target=FBgn0031322.1 474 843 +
ChrX	stalkie_big_nohaplotig	exon	46023243	46023471	100	-	.	Parent=FBgn0031322.1.mrna1;Target=FBgn0031322.1 245 473 +
ChrX	stalkie_big_nohaplotig	exon	46023551	46023794	100	-	.	Parent=FBgn0031322.1.mrna1;Target=FBgn0031322.1 1 244 +
ChrX	stalkie_big_nohaplotig	CDS	46017914	46018138	.	-	0	Parent=FBgn0031322.1.mrna1;Target=FBgn0031322.1 844 1068 +
ChrX	stalkie_big_nohaplotig	CDS	46022812	46023181	.	-	1	Parent=FBgn0031322.1.mrna1;Target=FBgn0031322.1 474 843 +
ChrX	stalkie_big_nohaplotig	CDS	46023243	46023471	.	-	2	Parent=FBgn0031322.1.mrna1;Target=FBgn0031322.1 245 473 +
ChrX	stalkie_big_nohaplotig	CDS	46023551	46023794	.	-	0	Parent=FBgn0031322.1.mrna1;Target=FBgn0031322.1 1 244 +
ChrX	gffcl	locus	46048302	46049092	.	+	.	ID=RLOC_00002628;geneIDs=comp906658_c0_seq1.path1;transcripts=comp906658_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46048302	46049092	.	+	.	ID=comp906658_c0_seq1.mrna1;geneID=comp906658_c0_seq1.path1;Name=comp906658_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=713;mismatches=0;indels=0;unknowns=0;Target=comp906658_c0_seq1 669 713 .;locus=RLOC_00002628
ChrX	stalkie_big_nohaplotig	exon	46048302	46048724	100	+	.	Parent=comp906658_c0_seq1.mrna1;Target=comp906658_c0_seq1 291 713 -
ChrX	stalkie_big_nohaplotig	exon	46048803	46049092	100	+	.	Parent=comp906658_c0_seq1.mrna1;Target=comp906658_c0_seq1 1 290 -
ChrX	stalkie_big_nohaplotig	CDS	46048302	46048346	.	+	0	Parent=comp906658_c0_seq1.mrna1
ChrX	gffcl	locus	46057446	46061270	.	-	.	ID=RLOC_00002629;geneIDs=FBgn0031319.1.path1;transcripts=FBgn0031319.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46057446	46061270	.	-	.	ID=FBgn0031319.1.mrna1;geneID=FBgn0031319.1.path1;Name=FBgn0031319.1;Dir=sensecoverage=100.0;identity=99.7;matches=1896;mismatches=0;indels=6;unknowns=0;locus=RLOC_00002629
ChrX	stalkie_big_nohaplotig	exon	46057446	46057556	100	-	.	Parent=FBgn0031319.1.mrna1;Target=FBgn0031319.1 1789 1899 +
ChrX	stalkie_big_nohaplotig	exon	46057623	46057863	97	-	.	Parent=FBgn0031319.1.mrna1;Target=FBgn0031319.1 1548 1788 +
ChrX	stalkie_big_nohaplotig	exon	46059014	46059821	100	-	.	Parent=FBgn0031319.1.mrna1;Target=FBgn0031319.1 740 1547 +
ChrX	stalkie_big_nohaplotig	exon	46060462	46060941	100	-	.	Parent=FBgn0031319.1.mrna1;Target=FBgn0031319.1 260 739 +
ChrX	stalkie_big_nohaplotig	exon	46061012	46061270	100	-	.	Parent=FBgn0031319.1.mrna1;Target=FBgn0031319.1 1 259 +
ChrX	stalkie_big_nohaplotig	CDS	46057446	46057556	.	-	0	Parent=FBgn0031319.1.mrna1;Target=FBgn0031319.1 1789 1899 +
ChrX	stalkie_big_nohaplotig	CDS	46057623	46057863	.	-	1	Parent=FBgn0031319.1.mrna1;Target=FBgn0031319.1 1548 1788 +
ChrX	stalkie_big_nohaplotig	CDS	46059014	46059821	.	-	2	Parent=FBgn0031319.1.mrna1;Target=FBgn0031319.1 740 1547 +
ChrX	stalkie_big_nohaplotig	CDS	46060462	46060941	.	-	2	Parent=FBgn0031319.1.mrna1;Target=FBgn0031319.1 260 739 +
ChrX	stalkie_big_nohaplotig	CDS	46061012	46061270	.	-	0	Parent=FBgn0031319.1.mrna1;Target=FBgn0031319.1 1 259 +
ChrX	gffcl	locus	46067106	46067592	.	+	.	ID=RLOC_00002630;geneIDs=comp143029_c0_seq1.path1;transcripts=comp143029_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46067106	46067592	.	+	.	ID=comp143029_c0_seq1.mrna1;geneID=comp143029_c0_seq1.path1;Name=comp143029_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=487;mismatches=0;indels=0;unknowns=0;Target=comp143029_c0_seq1 488 2 .;CDS_Target=comp143029_c0_seq1 373 242 .;locus=RLOC_00002630
ChrX	stalkie_big_nohaplotig	exon	46067106	46067592	100	+	.	Parent=comp143029_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46067346	46067477	.	+	0	Parent=comp143029_c0_seq1.mrna1
ChrX	gffcl	locus	46071739	46073860	.	+	.	ID=RLOC_00002631;geneIDs=FBgn0031317.1.path1;transcripts=FBgn0031317.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46071739	46073860	.	+	.	ID=FBgn0031317.1.mrna1;geneID=FBgn0031317.1.path1;Name=FBgn0031317.1;Dir=sensecoverage=100.0;identity=99.8;matches=1830;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002631
ChrX	stalkie_big_nohaplotig	exon	46071739	46072608	99	+	.	Parent=FBgn0031317.1.mrna1;Target=FBgn0031317.1 1 870 +
ChrX	stalkie_big_nohaplotig	exon	46072672	46072862	100	+	.	Parent=FBgn0031317.1.mrna1;Target=FBgn0031317.1 871 1061 +
ChrX	stalkie_big_nohaplotig	exon	46072956	46073070	100	+	.	Parent=FBgn0031317.1.mrna1;Target=FBgn0031317.1 1062 1176 +
ChrX	stalkie_big_nohaplotig	exon	46073132	46073618	99	+	.	Parent=FBgn0031317.1.mrna1;Target=FBgn0031317.1 1177 1663 +
ChrX	stalkie_big_nohaplotig	exon	46073691	46073860	99	+	.	Parent=FBgn0031317.1.mrna1;Target=FBgn0031317.1 1664 1833 +
ChrX	stalkie_big_nohaplotig	CDS	46071739	46072608	.	+	0	Parent=FBgn0031317.1.mrna1;Target=FBgn0031317.1 1 870 +
ChrX	stalkie_big_nohaplotig	CDS	46072672	46072862	.	+	0	Parent=FBgn0031317.1.mrna1;Target=FBgn0031317.1 871 1061 +
ChrX	stalkie_big_nohaplotig	CDS	46072956	46073070	.	+	1	Parent=FBgn0031317.1.mrna1;Target=FBgn0031317.1 1062 1176 +
ChrX	stalkie_big_nohaplotig	CDS	46073132	46073618	.	+	0	Parent=FBgn0031317.1.mrna1;Target=FBgn0031317.1 1177 1663 +
ChrX	stalkie_big_nohaplotig	CDS	46073691	46073860	.	+	2	Parent=FBgn0031317.1.mrna1;Target=FBgn0031317.1 1664 1833 +
ChrX	gffcl	locus	46076805	46077277	.	-	.	ID=RLOC_00002632;geneIDs=FBgn0051922.1.path1;transcripts=FBgn0051922.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46076805	46077277	.	-	.	ID=FBgn0051922.1.mrna1;geneID=FBgn0051922.1.path1;Name=FBgn0051922.1;Dir=sensecoverage=98.7;identity=100.0;matches=311;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002632
ChrX	stalkie_big_nohaplotig	exon	46076805	46076823	100	-	.	Parent=FBgn0051922.1.mrna1;Target=FBgn0051922.1 293 311 +
ChrX	stalkie_big_nohaplotig	exon	46076928	46077062	100	-	.	Parent=FBgn0051922.1.mrna1;Target=FBgn0051922.1 158 292 +
ChrX	stalkie_big_nohaplotig	exon	46077121	46077277	100	-	.	Parent=FBgn0051922.1.mrna1;Target=FBgn0051922.1 1 157 +
ChrX	stalkie_big_nohaplotig	CDS	46076807	46076823	.	-	2	Parent=FBgn0051922.1.mrna1;Target=FBgn0051922.1 293 309 +
ChrX	stalkie_big_nohaplotig	CDS	46076928	46077062	.	-	2	Parent=FBgn0051922.1.mrna1;Target=FBgn0051922.1 158 292 +
ChrX	stalkie_big_nohaplotig	CDS	46077121	46077277	.	-	0	Parent=FBgn0051922.1.mrna1;Target=FBgn0051922.1 1 157 +
ChrX	gffcl	locus	46079028	46082387	.	+	.	ID=RLOC_00002633;geneIDs=FBgn0032691.1.path1;transcripts=FBgn0032691.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46079028	46082387	.	+	.	ID=FBgn0032691.1.mrna1;geneID=FBgn0032691.1.path1;Name=FBgn0032691.1;Dir=sensecoverage=100.0;identity=99.8;matches=2411;mismatches=4;indels=0;unknowns=0;locus=RLOC_00002633
ChrX	stalkie_big_nohaplotig	exon	46079028	46079482	99	+	.	Parent=FBgn0032691.1.mrna1;Target=FBgn0032691.1 1 455 +
ChrX	stalkie_big_nohaplotig	exon	46079536	46079687	100	+	.	Parent=FBgn0032691.1.mrna1;Target=FBgn0032691.1 456 607 +
ChrX	stalkie_big_nohaplotig	exon	46079746	46079920	100	+	.	Parent=FBgn0032691.1.mrna1;Target=FBgn0032691.1 608 782 +
ChrX	stalkie_big_nohaplotig	exon	46079988	46080395	100	+	.	Parent=FBgn0032691.1.mrna1;Target=FBgn0032691.1 783 1190 +
ChrX	stalkie_big_nohaplotig	exon	46080450	46080794	100	+	.	Parent=FBgn0032691.1.mrna1;Target=FBgn0032691.1 1191 1535 +
ChrX	stalkie_big_nohaplotig	exon	46080858	46081095	100	+	.	Parent=FBgn0032691.1.mrna1;Target=FBgn0032691.1 1536 1773 +
ChrX	stalkie_big_nohaplotig	exon	46081154	46081306	100	+	.	Parent=FBgn0032691.1.mrna1;Target=FBgn0032691.1 1774 1926 +
ChrX	stalkie_big_nohaplotig	exon	46081365	46081500	100	+	.	Parent=FBgn0032691.1.mrna1;Target=FBgn0032691.1 1927 2062 +
ChrX	stalkie_big_nohaplotig	exon	46082035	46082387	99	+	.	Parent=FBgn0032691.1.mrna1;Target=FBgn0032691.1 2063 2415 +
ChrX	stalkie_big_nohaplotig	CDS	46079028	46079482	.	+	0	Parent=FBgn0032691.1.mrna1;Target=FBgn0032691.1 1 455 +
ChrX	stalkie_big_nohaplotig	CDS	46079536	46079687	.	+	1	Parent=FBgn0032691.1.mrna1;Target=FBgn0032691.1 456 607 +
ChrX	stalkie_big_nohaplotig	CDS	46079746	46079920	.	+	2	Parent=FBgn0032691.1.mrna1;Target=FBgn0032691.1 608 782 +
ChrX	stalkie_big_nohaplotig	CDS	46079988	46080395	.	+	1	Parent=FBgn0032691.1.mrna1;Target=FBgn0032691.1 783 1190 +
ChrX	stalkie_big_nohaplotig	CDS	46080450	46080794	.	+	1	Parent=FBgn0032691.1.mrna1;Target=FBgn0032691.1 1191 1535 +
ChrX	stalkie_big_nohaplotig	CDS	46080858	46081095	.	+	1	Parent=FBgn0032691.1.mrna1;Target=FBgn0032691.1 1536 1773 +
ChrX	stalkie_big_nohaplotig	CDS	46081154	46081306	.	+	0	Parent=FBgn0032691.1.mrna1;Target=FBgn0032691.1 1774 1926 +
ChrX	stalkie_big_nohaplotig	CDS	46081365	46081500	.	+	0	Parent=FBgn0032691.1.mrna1;Target=FBgn0032691.1 1927 2062 +
ChrX	stalkie_big_nohaplotig	CDS	46082035	46082387	.	+	2	Parent=FBgn0032691.1.mrna1;Target=FBgn0032691.1 2063 2415 +
ChrX	gffcl	locus	46082549	46086929	.	-	.	ID=RLOC_00002634;geneIDs=FBgn0032690.1.path1;transcripts=FBgn0032690.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46082549	46086929	.	-	.	ID=FBgn0032690.1.mrna1;geneID=FBgn0032690.1.path1;Name=FBgn0032690.1;Dir=sensecoverage=100.0;identity=99.9;matches=2388;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002634
ChrX	stalkie_big_nohaplotig	exon	46082549	46083209	99	-	.	Parent=FBgn0032690.1.mrna1;Target=FBgn0032690.1 1731 2391 +
ChrX	stalkie_big_nohaplotig	exon	46085138	46086017	99	-	.	Parent=FBgn0032690.1.mrna1;Target=FBgn0032690.1 851 1730 +
ChrX	stalkie_big_nohaplotig	exon	46086080	46086929	100	-	.	Parent=FBgn0032690.1.mrna1;Target=FBgn0032690.1 1 850 +
ChrX	stalkie_big_nohaplotig	CDS	46082549	46083209	.	-	1	Parent=FBgn0032690.1.mrna1;Target=FBgn0032690.1 1731 2391 +
ChrX	stalkie_big_nohaplotig	CDS	46085138	46086017	.	-	2	Parent=FBgn0032690.1.mrna1;Target=FBgn0032690.1 851 1730 +
ChrX	stalkie_big_nohaplotig	CDS	46086080	46086929	.	-	0	Parent=FBgn0032690.1.mrna1;Target=FBgn0032690.1 1 850 +
ChrX	gffcl	locus	46098925	46099533	.	-	.	ID=RLOC_00002635;geneIDs=comp147196_c0_seq1.path1;transcripts=comp147196_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46098925	46099533	.	-	.	ID=comp147196_c0_seq1.mrna1;geneID=comp147196_c0_seq1.path1;Name=comp147196_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=609;mismatches=0;indels=0;unknowns=0;Target=comp147196_c0_seq1 609 1 .;CDS_Target=comp147196_c0_seq1 126 37 .;locus=RLOC_00002635
ChrX	stalkie_big_nohaplotig	exon	46098925	46099533	100	-	.	Parent=comp147196_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46099408	46099497	.	-	0	Parent=comp147196_c0_seq1.mrna1
ChrX	gffcl	locus	46099569	46116235	.	-	.	ID=RLOC_00002636;geneIDs=FBgn0000629.1.path1,comp161005_c2_seq1.path1;transcripts=comp161005_c2_seq1.mrna1,FBgn0000629.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46099569	46116235	.	-	.	ID=comp161005_c2_seq1.mrna1;geneID=comp161005_c2_seq1.path1;Name=comp161005_c2_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=2539;mismatches=9;indels=5;unknowns=0;locus=RLOC_00002636
ChrX	stalkie_big_nohaplotig	exon	46099569	46100129	98	-	.	Parent=comp161005_c2_seq1.mrna1;Target=comp161005_c2_seq1 1 556 -
ChrX	stalkie_big_nohaplotig	exon	46110521	46110947	100	-	.	Parent=comp161005_c2_seq1.mrna1;Target=comp161005_c2_seq1 557 983 -
ChrX	stalkie_big_nohaplotig	exon	46111024	46111160	100	-	.	Parent=comp161005_c2_seq1.mrna1;Target=comp161005_c2_seq1 984 1120 -
ChrX	stalkie_big_nohaplotig	exon	46112918	46113107	100	-	.	Parent=comp161005_c2_seq1.mrna1;Target=comp161005_c2_seq1 1121 1310 -
ChrX	stalkie_big_nohaplotig	exon	46113171	46113268	100	-	.	Parent=comp161005_c2_seq1.mrna1;Target=comp161005_c2_seq1 1311 1408 -
ChrX	stalkie_big_nohaplotig	exon	46114687	46114847	100	-	.	Parent=comp161005_c2_seq1.mrna1;Target=comp161005_c2_seq1 1409 1569 -
ChrX	stalkie_big_nohaplotig	exon	46114923	46115612	100	-	.	Parent=comp161005_c2_seq1.mrna1;Target=comp161005_c2_seq1 1570 2259 -
ChrX	stalkie_big_nohaplotig	exon	46115947	46116235	98	-	.	Parent=comp161005_c2_seq1.mrna1;Target=comp161005_c2_seq1 2260 2548 -
ChrX	stalkie_big_nohaplotig	CDS	46099720	46100129	.	-	2	Parent=comp161005_c2_seq1.mrna1;Target=comp161005_c2_seq1 147 556 .
ChrX	stalkie_big_nohaplotig	CDS	46110521	46110947	.	-	0	Parent=comp161005_c2_seq1.mrna1;Target=comp161005_c2_seq1 557 983 .
ChrX	stalkie_big_nohaplotig	CDS	46111024	46111160	.	-	2	Parent=comp161005_c2_seq1.mrna1;Target=comp161005_c2_seq1 984 1120 .
ChrX	stalkie_big_nohaplotig	CDS	46112918	46113107	.	-	0	Parent=comp161005_c2_seq1.mrna1;Target=comp161005_c2_seq1 1121 1310 .
ChrX	stalkie_big_nohaplotig	CDS	46113171	46113268	.	-	2	Parent=comp161005_c2_seq1.mrna1;Target=comp161005_c2_seq1 1311 1408 .
ChrX	stalkie_big_nohaplotig	CDS	46114687	46114847	.	-	1	Parent=comp161005_c2_seq1.mrna1;Target=comp161005_c2_seq1 1409 1569 .
ChrX	stalkie_big_nohaplotig	CDS	46114923	46115612	.	-	1	Parent=comp161005_c2_seq1.mrna1;Target=comp161005_c2_seq1 1570 2259 .
ChrX	stalkie_big_nohaplotig	CDS	46115947	46116068	.	-	0	Parent=comp161005_c2_seq1.mrna1;Target=comp161005_c2_seq1 2260 2381 .
ChrX	stalkie_big_nohaplotig	mRNA	46110051	46115612	.	-	.	ID=FBgn0000629.1.mrna1;geneID=FBgn0000629.1.path1;Name=FBgn0000629.1;Dir=sensecoverage=94.2;identity=100.0;matches=2110;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002636
ChrX	stalkie_big_nohaplotig	exon	46110051	46110457	100	-	.	Parent=FBgn0000629.1.mrna1;Target=FBgn0000629.1 1835 2241 +
ChrX	stalkie_big_nohaplotig	exon	46110521	46110947	100	-	.	Parent=FBgn0000629.1.mrna1;Target=FBgn0000629.1 1408 1834 +
ChrX	stalkie_big_nohaplotig	exon	46111024	46111160	100	-	.	Parent=FBgn0000629.1.mrna1;Target=FBgn0000629.1 1271 1407 +
ChrX	stalkie_big_nohaplotig	exon	46112918	46113107	100	-	.	Parent=FBgn0000629.1.mrna1;Target=FBgn0000629.1 1081 1270 +
ChrX	stalkie_big_nohaplotig	exon	46113171	46113268	100	-	.	Parent=FBgn0000629.1.mrna1;Target=FBgn0000629.1 983 1080 +
ChrX	stalkie_big_nohaplotig	exon	46114687	46114847	100	-	.	Parent=FBgn0000629.1.mrna1;Target=FBgn0000629.1 822 982 +
ChrX	stalkie_big_nohaplotig	exon	46114923	46115612	100	-	.	Parent=FBgn0000629.1.mrna1;Target=FBgn0000629.1 132 821 +
ChrX	stalkie_big_nohaplotig	CDS	46110051	46110457	.	-	2	Parent=FBgn0000629.1.mrna1;Target=FBgn0000629.1 1835 2241 +
ChrX	stalkie_big_nohaplotig	CDS	46110521	46110947	.	-	0	Parent=FBgn0000629.1.mrna1;Target=FBgn0000629.1 1408 1834 +
ChrX	stalkie_big_nohaplotig	CDS	46111024	46111160	.	-	2	Parent=FBgn0000629.1.mrna1;Target=FBgn0000629.1 1271 1407 +
ChrX	stalkie_big_nohaplotig	CDS	46112918	46113107	.	-	0	Parent=FBgn0000629.1.mrna1;Target=FBgn0000629.1 1081 1270 +
ChrX	stalkie_big_nohaplotig	CDS	46113171	46113268	.	-	2	Parent=FBgn0000629.1.mrna1;Target=FBgn0000629.1 983 1080 +
ChrX	stalkie_big_nohaplotig	CDS	46114687	46114847	.	-	1	Parent=FBgn0000629.1.mrna1;Target=FBgn0000629.1 822 982 +
ChrX	stalkie_big_nohaplotig	CDS	46114923	46115611	.	-	0	Parent=FBgn0000629.1.mrna1;Target=FBgn0000629.1 133 821 +
ChrX	gffcl	locus	46109253	46109861	.	-	.	ID=RLOC_00002637;geneIDs=comp147196_c0_seq1.path2;transcripts=comp147196_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	46109253	46109861	.	-	.	ID=comp147196_c0_seq1.mrna2;geneID=comp147196_c0_seq1.path2;Name=comp147196_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=609;mismatches=0;indels=0;unknowns=0;Target=comp147196_c0_seq1 609 1 .;CDS_Target=comp147196_c0_seq1 126 37 .;locus=RLOC_00002637
ChrX	stalkie_big_nohaplotig	exon	46109253	46109861	100	-	.	Parent=comp147196_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	46109736	46109825	.	-	0	Parent=comp147196_c0_seq1.mrna2
ChrX	gffcl	locus	46128317	46142616	.	+	.	ID=RLOC_00002638;geneIDs=FBgn0032689.1.path1;transcripts=FBgn0032689.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46128317	46142616	.	+	.	ID=FBgn0032689.1.mrna1;geneID=FBgn0032689.1.path1;Name=FBgn0032689.1;Dir=sensecoverage=100.0;identity=99.9;matches=2842;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002638
ChrX	stalkie_big_nohaplotig	exon	46128317	46128605	99	+	.	Parent=FBgn0032689.1.mrna1;Target=FBgn0032689.1 1 289 +
ChrX	stalkie_big_nohaplotig	exon	46131432	46131566	100	+	.	Parent=FBgn0032689.1.mrna1;Target=FBgn0032689.1 290 424 +
ChrX	stalkie_big_nohaplotig	exon	46135543	46135883	100	+	.	Parent=FBgn0032689.1.mrna1;Target=FBgn0032689.1 425 765 +
ChrX	stalkie_big_nohaplotig	exon	46137866	46138747	100	+	.	Parent=FBgn0032689.1.mrna1;Target=FBgn0032689.1 766 1647 +
ChrX	stalkie_big_nohaplotig	exon	46138813	46139201	100	+	.	Parent=FBgn0032689.1.mrna1;Target=FBgn0032689.1 1648 2036 +
ChrX	stalkie_big_nohaplotig	exon	46139285	46139476	100	+	.	Parent=FBgn0032689.1.mrna1;Target=FBgn0032689.1 2037 2228 +
ChrX	stalkie_big_nohaplotig	exon	46141299	46141487	100	+	.	Parent=FBgn0032689.1.mrna1;Target=FBgn0032689.1 2229 2417 +
ChrX	stalkie_big_nohaplotig	exon	46141551	46141647	100	+	.	Parent=FBgn0032689.1.mrna1;Target=FBgn0032689.1 2418 2514 +
ChrX	stalkie_big_nohaplotig	exon	46142216	46142349	100	+	.	Parent=FBgn0032689.1.mrna1;Target=FBgn0032689.1 2515 2648 +
ChrX	stalkie_big_nohaplotig	exon	46142421	46142616	100	+	.	Parent=FBgn0032689.1.mrna1;Target=FBgn0032689.1 2649 2844 +
ChrX	stalkie_big_nohaplotig	CDS	46128317	46128605	.	+	0	Parent=FBgn0032689.1.mrna1;Target=FBgn0032689.1 1 289 +
ChrX	stalkie_big_nohaplotig	CDS	46131432	46131566	.	+	2	Parent=FBgn0032689.1.mrna1;Target=FBgn0032689.1 290 424 +
ChrX	stalkie_big_nohaplotig	CDS	46135543	46135883	.	+	2	Parent=FBgn0032689.1.mrna1;Target=FBgn0032689.1 425 765 +
ChrX	stalkie_big_nohaplotig	CDS	46137866	46138747	.	+	0	Parent=FBgn0032689.1.mrna1;Target=FBgn0032689.1 766 1647 +
ChrX	stalkie_big_nohaplotig	CDS	46138813	46139201	.	+	0	Parent=FBgn0032689.1.mrna1;Target=FBgn0032689.1 1648 2036 +
ChrX	stalkie_big_nohaplotig	CDS	46139285	46139476	.	+	1	Parent=FBgn0032689.1.mrna1;Target=FBgn0032689.1 2037 2228 +
ChrX	stalkie_big_nohaplotig	CDS	46141299	46141487	.	+	1	Parent=FBgn0032689.1.mrna1;Target=FBgn0032689.1 2229 2417 +
ChrX	stalkie_big_nohaplotig	CDS	46141551	46141647	.	+	1	Parent=FBgn0032689.1.mrna1;Target=FBgn0032689.1 2418 2514 +
ChrX	stalkie_big_nohaplotig	CDS	46142216	46142349	.	+	0	Parent=FBgn0032689.1.mrna1;Target=FBgn0032689.1 2515 2648 +
ChrX	stalkie_big_nohaplotig	CDS	46142421	46142616	.	+	1	Parent=FBgn0032689.1.mrna1;Target=FBgn0032689.1 2649 2844 +
ChrX	gffcl	locus	46143406	46144087	.	-	.	ID=RLOC_00002639;geneIDs=comp64350_c0_seq1.path1;transcripts=comp64350_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46143406	46144087	.	-	.	ID=comp64350_c0_seq1.mrna1;geneID=comp64350_c0_seq1.path1;Name=comp64350_c0_seq1;Dir=indeterminatecoverage=96.2;identity=99.6;matches=679;mismatches=2;indels=1;unknowns=0;Target=comp64350_c0_seq1 681 1 .;CDS_Target=comp64350_c0_seq1 567 496 .;locus=RLOC_00002639
ChrX	stalkie_big_nohaplotig	exon	46143406	46144087	99	-	.	Parent=comp64350_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46143521	46143592	.	-	0	Parent=comp64350_c0_seq1.mrna1
ChrX	gffcl	locus	46170425	46171854	.	+	.	ID=RLOC_00002640;geneIDs=comp159238_c0_seq1.path1;transcripts=comp159238_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46170425	46171854	.	+	.	ID=comp159238_c0_seq1.mrna1;geneID=comp159238_c0_seq1.path1;Name=comp159238_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=1423;mismatches=7;indels=18;unknowns=0;Target=comp159238_c0_seq1 1448 1 .;CDS_Target=comp159238_c0_seq1 1447 1316 .;locus=RLOC_00002640
ChrX	stalkie_big_nohaplotig	exon	46170425	46171854	98	+	.	Parent=comp159238_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46171722	46171853	.	+	0	Parent=comp159238_c0_seq1.mrna1
ChrX	gffcl	locus	46173679	46186956	.	-	.	ID=RLOC_00002641;geneIDs=FBgn0032688.1.path1;transcripts=FBgn0032688.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46173679	46186956	.	-	.	ID=FBgn0032688.1.mrna1;geneID=FBgn0032688.1.path1;Name=FBgn0032688.1;Dir=sensecoverage=100.0;identity=99.9;matches=2704;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002641
ChrX	stalkie_big_nohaplotig	exon	46173679	46174352	100	-	.	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 2033 2706 +
ChrX	stalkie_big_nohaplotig	exon	46175703	46175810	100	-	.	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 1925 2032 +
ChrX	stalkie_big_nohaplotig	exon	46176040	46176094	100	-	.	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 1870 1924 +
ChrX	stalkie_big_nohaplotig	exon	46176152	46176262	100	-	.	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 1759 1869 +
ChrX	stalkie_big_nohaplotig	exon	46176316	46176419	100	-	.	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 1655 1758 +
ChrX	stalkie_big_nohaplotig	exon	46176476	46177045	100	-	.	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 1085 1654 +
ChrX	stalkie_big_nohaplotig	exon	46182841	46182946	100	-	.	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 979 1084 +
ChrX	stalkie_big_nohaplotig	exon	46183004	46183165	100	-	.	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 817 978 +
ChrX	stalkie_big_nohaplotig	exon	46183238	46183537	99	-	.	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 517 816 +
ChrX	stalkie_big_nohaplotig	exon	46183593	46183746	100	-	.	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 363 516 +
ChrX	stalkie_big_nohaplotig	exon	46183833	46183959	100	-	.	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 236 362 +
ChrX	stalkie_big_nohaplotig	exon	46186722	46186956	99	-	.	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 1 235 +
ChrX	stalkie_big_nohaplotig	CDS	46173679	46174352	.	-	2	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 2033 2706 +
ChrX	stalkie_big_nohaplotig	CDS	46175703	46175810	.	-	2	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 1925 2032 +
ChrX	stalkie_big_nohaplotig	CDS	46176040	46176094	.	-	0	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 1870 1924 +
ChrX	stalkie_big_nohaplotig	CDS	46176152	46176262	.	-	0	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 1759 1869 +
ChrX	stalkie_big_nohaplotig	CDS	46176316	46176419	.	-	2	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 1655 1758 +
ChrX	stalkie_big_nohaplotig	CDS	46176476	46177045	.	-	2	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 1085 1654 +
ChrX	stalkie_big_nohaplotig	CDS	46182841	46182946	.	-	0	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 979 1084 +
ChrX	stalkie_big_nohaplotig	CDS	46183004	46183165	.	-	0	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 817 978 +
ChrX	stalkie_big_nohaplotig	CDS	46183238	46183537	.	-	0	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 517 816 +
ChrX	stalkie_big_nohaplotig	CDS	46183593	46183746	.	-	1	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 363 516 +
ChrX	stalkie_big_nohaplotig	CDS	46183833	46183959	.	-	2	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 236 362 +
ChrX	stalkie_big_nohaplotig	CDS	46186722	46186872	.	-	0	Parent=FBgn0032688.1.mrna1;Target=FBgn0032688.1 85 235 +
ChrX	gffcl	locus	46189677	46195185	.	+	.	ID=RLOC_00002642;geneIDs=FBgn0020545.1.path1;transcripts=FBgn0020545.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46189677	46195185	.	+	.	ID=FBgn0020545.1.mrna1;geneID=FBgn0020545.1.path1;Name=FBgn0020545.1;Dir=sensecoverage=100.0;identity=99.8;matches=994;mismatches=1;indels=1;unknowns=0;Target=FBgn0020545.1 3 29 +;locus=RLOC_00002642
ChrX	stalkie_big_nohaplotig	exon	46189677	46189751	97	+	.	Parent=FBgn0020545.1.mrna1;Target=FBgn0020545.1 1 76 +
ChrX	stalkie_big_nohaplotig	exon	46190365	46190439	100	+	.	Parent=FBgn0020545.1.mrna1;Target=FBgn0020545.1 77 151 +
ChrX	stalkie_big_nohaplotig	exon	46194341	46195185	100	+	.	Parent=FBgn0020545.1.mrna1;Target=FBgn0020545.1 152 996 +
ChrX	stalkie_big_nohaplotig	CDS	46189679	46189704	.	+	0	Parent=FBgn0020545.1.mrna1
ChrX	gffcl	locus	46195379	46201653	.	+	.	ID=RLOC_00002643;geneIDs=comp152238_c0_seq1.path1;transcripts=comp152238_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46195379	46201653	.	+	.	ID=comp152238_c0_seq1.mrna1;geneID=comp152238_c0_seq1.path1;Name=comp152238_c0_seq1;Dir=sensecoverage=96.9;identity=99.0;matches=834;mismatches=8;indels=0;unknowns=0;locus=RLOC_00002643
ChrX	stalkie_big_nohaplotig	exon	46195379	46195652	100	+	.	Parent=comp152238_c0_seq1.mrna1;Target=comp152238_c0_seq1 1 274 +
ChrX	stalkie_big_nohaplotig	exon	46201024	46201144	99	+	.	Parent=comp152238_c0_seq1.mrna1;Target=comp152238_c0_seq1 275 395 +
ChrX	stalkie_big_nohaplotig	exon	46201207	46201653	98	+	.	Parent=comp152238_c0_seq1.mrna1;Target=comp152238_c0_seq1 396 842 +
ChrX	stalkie_big_nohaplotig	CDS	46195570	46195652	.	+	0	Parent=comp152238_c0_seq1.mrna1;Target=comp152238_c0_seq1 192 274 +
ChrX	stalkie_big_nohaplotig	CDS	46201024	46201144	.	+	1	Parent=comp152238_c0_seq1.mrna1;Target=comp152238_c0_seq1 275 395 +
ChrX	stalkie_big_nohaplotig	CDS	46201207	46201368	.	+	0	Parent=comp152238_c0_seq1.mrna1;Target=comp152238_c0_seq1 396 557 +
ChrX	gffcl	locus	46284435	46285664	.	-	.	ID=RLOC_00002644;geneIDs=comp159254_c0_seq1.path1;transcripts=comp159254_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46284435	46285664	.	-	.	ID=comp159254_c0_seq1.mrna1;geneID=comp159254_c0_seq1.path1;Name=comp159254_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1226;mismatches=4;indels=10;unknowns=0;Target=comp159254_c0_seq1 1240 1 .;CDS_Target=comp159254_c0_seq1 183 52 .;locus=RLOC_00002644
ChrX	stalkie_big_nohaplotig	exon	46284435	46285664	98	-	.	Parent=comp159254_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46285482	46285613	.	-	0	Parent=comp159254_c0_seq1.mrna1
ChrX	gffcl	locus	46285827	46286458	.	+	.	ID=RLOC_00002645;geneIDs=comp147952_c0_seq1.path1;transcripts=comp147952_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46285827	46286458	.	+	.	ID=comp147952_c0_seq1.mrna1;geneID=comp147952_c0_seq1.path1;Name=comp147952_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=626;mismatches=6;indels=0;unknowns=0;Target=comp147952_c0_seq1 632 1 .;CDS_Target=comp147952_c0_seq1 622 482 .;locus=RLOC_00002645
ChrX	stalkie_big_nohaplotig	exon	46285827	46286458	99	+	.	Parent=comp147952_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46286308	46286448	.	+	0	Parent=comp147952_c0_seq1.mrna1
ChrX	gffcl	locus	46289317	46289815	.	-	.	ID=RLOC_00002647;geneIDs=comp113084_c0_seq1.path1;transcripts=comp113084_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46289317	46289815	.	-	.	ID=comp113084_c0_seq1.mrna1;geneID=comp113084_c0_seq1.path1;Name=comp113084_c0_seq1;Dir=indeterminatecoverage=99.4;identity=100.0;matches=499;mismatches=0;indels=0;unknowns=0;Target=comp113084_c0_seq1 502 4 .;CDS_Target=comp113084_c0_seq1 502 389 .;locus=RLOC_00002647
ChrX	stalkie_big_nohaplotig	exon	46289317	46289815	100	-	.	Parent=comp113084_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46289317	46289430	.	-	0	Parent=comp113084_c0_seq1.mrna1
ChrX	gffcl	locus	46308958	46397675	.	+	.	ID=RLOC_00002648;geneIDs=FBgn0032723.1.path1;transcripts=FBgn0032723.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46308958	46397675	.	+	.	ID=FBgn0032723.1.mrna1;geneID=FBgn0032723.1.path1;Name=FBgn0032723.1;Dir=sensecoverage=100.0;identity=99.9;matches=5758;mismatches=8;indels=0;unknowns=0;locus=RLOC_00002648
ChrX	stalkie_big_nohaplotig	exon	46308958	46309072	100	+	.	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 1 115 +
ChrX	stalkie_big_nohaplotig	exon	46309146	46312106	99	+	.	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 116 3076 +
ChrX	stalkie_big_nohaplotig	exon	46312230	46313667	99	+	.	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 3077 4514 +
ChrX	stalkie_big_nohaplotig	exon	46313728	46313985	100	+	.	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 4515 4772 +
ChrX	stalkie_big_nohaplotig	exon	46314050	46314173	100	+	.	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 4773 4896 +
ChrX	stalkie_big_nohaplotig	exon	46327724	46327863	100	+	.	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 4897 5036 +
ChrX	stalkie_big_nohaplotig	exon	46378717	46378862	100	+	.	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 5037 5182 +
ChrX	stalkie_big_nohaplotig	exon	46379028	46379126	100	+	.	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 5183 5281 +
ChrX	stalkie_big_nohaplotig	exon	46379450	46379541	100	+	.	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 5282 5373 +
ChrX	stalkie_big_nohaplotig	exon	46391087	46391263	99	+	.	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 5374 5550 +
ChrX	stalkie_big_nohaplotig	exon	46391320	46391472	100	+	.	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 5551 5703 +
ChrX	stalkie_big_nohaplotig	exon	46397613	46397675	98	+	.	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 5704 5766 +
ChrX	stalkie_big_nohaplotig	CDS	46308958	46309072	.	+	0	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 1 115 +
ChrX	stalkie_big_nohaplotig	CDS	46309146	46312106	.	+	2	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 116 3076 +
ChrX	stalkie_big_nohaplotig	CDS	46312230	46313667	.	+	2	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 3077 4514 +
ChrX	stalkie_big_nohaplotig	CDS	46313728	46313985	.	+	1	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 4515 4772 +
ChrX	stalkie_big_nohaplotig	CDS	46314050	46314173	.	+	1	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 4773 4896 +
ChrX	stalkie_big_nohaplotig	CDS	46327724	46327863	.	+	0	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 4897 5036 +
ChrX	stalkie_big_nohaplotig	CDS	46378717	46378862	.	+	1	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 5037 5182 +
ChrX	stalkie_big_nohaplotig	CDS	46379028	46379126	.	+	2	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 5183 5281 +
ChrX	stalkie_big_nohaplotig	CDS	46379450	46379541	.	+	2	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 5282 5373 +
ChrX	stalkie_big_nohaplotig	CDS	46391087	46391263	.	+	0	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 5374 5550 +
ChrX	stalkie_big_nohaplotig	CDS	46391320	46391472	.	+	0	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 5551 5703 +
ChrX	stalkie_big_nohaplotig	CDS	46397613	46397675	.	+	0	Parent=FBgn0032723.1.mrna1;Target=FBgn0032723.1 5704 5766 +
ChrX	gffcl	locus	46334946	46335896	.	+	.	ID=RLOC_00002649;geneIDs=comp148518_c0_seq1.path1;transcripts=comp148518_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46334946	46335896	.	+	.	ID=comp148518_c0_seq1.mrna1;geneID=comp148518_c0_seq1.path1;Name=comp148518_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=950;mismatches=1;indels=0;unknowns=0;Target=comp148518_c0_seq1 951 1 .;CDS_Target=comp148518_c0_seq1 116 3 .;locus=RLOC_00002649
ChrX	stalkie_big_nohaplotig	exon	46334946	46335896	99	+	.	Parent=comp148518_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46334948	46335061	.	+	0	Parent=comp148518_c0_seq1.mrna1
ChrX	gffcl	locus	46336328	46337105	.	+	.	ID=RLOC_00002650;geneIDs=comp484063_c0_seq1.path1;transcripts=comp484063_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46336328	46337105	.	+	.	ID=comp484063_c0_seq1.mrna1;geneID=comp484063_c0_seq1.path1;Name=comp484063_c0_seq1;Dir=indeterminatecoverage=59.6;identity=76.3;matches=174;mismatches=29;indels=25;unknowns=0;Target=comp484063_c0_seq1 95 81 .;locus=RLOC_00002650
ChrX	stalkie_big_nohaplotig	exon	46336328	46336430	74	+	.	Parent=comp484063_c0_seq1.mrna1;Target=comp484063_c0_seq1 183 79 .
ChrX	stalkie_big_nohaplotig	exon	46336995	46337105	77	+	.	Parent=comp484063_c0_seq1.mrna1;Target=comp484063_c0_seq1 295 184 .
ChrX	stalkie_big_nohaplotig	CDS	46336330	46336342	.	+	0	Parent=comp484063_c0_seq1.mrna1
ChrX	gffcl	locus	46337886	46338331	.	-	.	ID=RLOC_00002651;geneIDs=comp159246_c0_seq1.path1;transcripts=comp159246_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46337886	46338331	.	-	.	ID=comp159246_c0_seq1.mrna1;geneID=comp159246_c0_seq1.path1;Name=comp159246_c0_seq1;Dir=indeterminatecoverage=53.2;identity=100.0;matches=446;mismatches=0;indels=0;unknowns=0;Target=comp159246_c0_seq1 446 1 .;CDS_Target=comp159246_c0_seq1 100 35 .;locus=RLOC_00002651
ChrX	stalkie_big_nohaplotig	exon	46337886	46338331	100	-	.	Parent=comp159246_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46338232	46338297	.	-	0	Parent=comp159246_c0_seq1.mrna1
ChrX	gffcl	locus	46503100	46503647	.	+	.	ID=RLOC_00002652;geneIDs=comp1036322_c0_seq1.path1;transcripts=comp1036322_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46503100	46503647	.	+	.	ID=comp1036322_c0_seq1.mrna1;geneID=comp1036322_c0_seq1.path1;Name=comp1036322_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=548;mismatches=0;indels=0;unknowns=0;Target=comp1036322_c0_seq1 548 1 .;CDS_Target=comp1036322_c0_seq1 295 2 .;locus=RLOC_00002652
ChrX	stalkie_big_nohaplotig	exon	46503100	46503647	100	+	.	Parent=comp1036322_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46503101	46503394	.	+	0	Parent=comp1036322_c0_seq1.mrna1
ChrX	gffcl	locus	46504133	46580673	.	+	.	ID=RLOC_00002653;geneIDs=FBgn0003896.1.path1;transcripts=FBgn0003896.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46504133	46580673	.	+	.	ID=FBgn0003896.1.mrna1;geneID=FBgn0003896.1.path1;Name=FBgn0003896.1;Dir=sensecoverage=100.0;identity=100.0;matches=1344;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002653
ChrX	stalkie_big_nohaplotig	exon	46504133	46504274	100	+	.	Parent=FBgn0003896.1.mrna1;Target=FBgn0003896.1 1 142 +
ChrX	stalkie_big_nohaplotig	exon	46568587	46568776	100	+	.	Parent=FBgn0003896.1.mrna1;Target=FBgn0003896.1 143 332 +
ChrX	stalkie_big_nohaplotig	exon	46572460	46572590	100	+	.	Parent=FBgn0003896.1.mrna1;Target=FBgn0003896.1 333 463 +
ChrX	stalkie_big_nohaplotig	exon	46572727	46572915	100	+	.	Parent=FBgn0003896.1.mrna1;Target=FBgn0003896.1 464 652 +
ChrX	stalkie_big_nohaplotig	exon	46579782	46579902	100	+	.	Parent=FBgn0003896.1.mrna1;Target=FBgn0003896.1 653 773 +
ChrX	stalkie_big_nohaplotig	exon	46579973	46580135	100	+	.	Parent=FBgn0003896.1.mrna1;Target=FBgn0003896.1 774 936 +
ChrX	stalkie_big_nohaplotig	exon	46580201	46580416	100	+	.	Parent=FBgn0003896.1.mrna1;Target=FBgn0003896.1 937 1152 +
ChrX	stalkie_big_nohaplotig	exon	46580482	46580673	100	+	.	Parent=FBgn0003896.1.mrna1;Target=FBgn0003896.1 1153 1344 +
ChrX	stalkie_big_nohaplotig	CDS	46504133	46504274	.	+	0	Parent=FBgn0003896.1.mrna1;Target=FBgn0003896.1 1 142 +
ChrX	stalkie_big_nohaplotig	CDS	46568587	46568776	.	+	2	Parent=FBgn0003896.1.mrna1;Target=FBgn0003896.1 143 332 +
ChrX	stalkie_big_nohaplotig	CDS	46572460	46572590	.	+	1	Parent=FBgn0003896.1.mrna1;Target=FBgn0003896.1 333 463 +
ChrX	stalkie_big_nohaplotig	CDS	46572727	46572915	.	+	2	Parent=FBgn0003896.1.mrna1;Target=FBgn0003896.1 464 652 +
ChrX	stalkie_big_nohaplotig	CDS	46579782	46579902	.	+	2	Parent=FBgn0003896.1.mrna1;Target=FBgn0003896.1 653 773 +
ChrX	stalkie_big_nohaplotig	CDS	46579973	46580135	.	+	1	Parent=FBgn0003896.1.mrna1;Target=FBgn0003896.1 774 936 +
ChrX	stalkie_big_nohaplotig	CDS	46580201	46580416	.	+	0	Parent=FBgn0003896.1.mrna1;Target=FBgn0003896.1 937 1152 +
ChrX	stalkie_big_nohaplotig	CDS	46580482	46580673	.	+	0	Parent=FBgn0003896.1.mrna1;Target=FBgn0003896.1 1153 1344 +
ChrX	gffcl	locus	46581034	46581296	.	+	.	ID=RLOC_00002654;geneIDs=comp149762_c0_seq1.path1;transcripts=comp149762_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46581034	46581296	.	+	.	ID=comp149762_c0_seq1.mrna1;geneID=comp149762_c0_seq1.path1;Name=comp149762_c0_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=263;mismatches=0;indels=0;unknowns=0;Target=comp149762_c0_seq1 264 2 .;CDS_Target=comp149762_c0_seq1 264 4 .;locus=RLOC_00002654
ChrX	stalkie_big_nohaplotig	exon	46581034	46581296	100	+	.	Parent=comp149762_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46581036	46581296	.	+	0	Parent=comp149762_c0_seq1.mrna1
ChrX	gffcl	locus	46581487	46581829	.	+	.	ID=RLOC_00002655;geneIDs=comp135976_c0_seq1.path1;transcripts=comp135976_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46581487	46581829	.	+	.	ID=comp135976_c0_seq1.mrna1;geneID=comp135976_c0_seq1.path1;Name=comp135976_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=337;mismatches=0;indels=6;unknowns=0;Target=comp135976_c0_seq1 337 1 .;CDS_Target=comp135976_c0_seq1 93 1 .;locus=RLOC_00002655
ChrX	stalkie_big_nohaplotig	exon	46581487	46581829	98	+	.	Parent=comp135976_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46581487	46581579	.	+	0	Parent=comp135976_c0_seq1.mrna1
ChrX	gffcl	locus	46582553	46583134	.	+	.	ID=RLOC_00002656;geneIDs=comp149839_c0_seq1.path1;transcripts=comp149839_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46582553	46583134	.	+	.	ID=comp149839_c0_seq1.mrna1;geneID=comp149839_c0_seq1.path1;Name=comp149839_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=582;mismatches=0;indels=0;unknowns=0;Target=comp149839_c0_seq1 582 1 .;CDS_Target=comp149839_c0_seq1 234 133 .;locus=RLOC_00002656
ChrX	stalkie_big_nohaplotig	exon	46582553	46583134	100	+	.	Parent=comp149839_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46582685	46582786	.	+	0	Parent=comp149839_c0_seq1.mrna1
ChrX	gffcl	locus	46600715	46601600	.	+	.	ID=RLOC_00002657;geneIDs=FBgn0032720.1.path1;transcripts=FBgn0032720.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46600715	46601600	.	+	.	ID=FBgn0032720.1.mrna1;geneID=FBgn0032720.1.path1;Name=FBgn0032720.1;Dir=sensecoverage=100.0;identity=100.0;matches=546;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002657
ChrX	stalkie_big_nohaplotig	exon	46600715	46600750	100	+	.	Parent=FBgn0032720.1.mrna1;Target=FBgn0032720.1 1 36 +
ChrX	stalkie_big_nohaplotig	exon	46600823	46600946	100	+	.	Parent=FBgn0032720.1.mrna1;Target=FBgn0032720.1 37 160 +
ChrX	stalkie_big_nohaplotig	exon	46601215	46601600	100	+	.	Parent=FBgn0032720.1.mrna1;Target=FBgn0032720.1 161 546 +
ChrX	stalkie_big_nohaplotig	CDS	46600715	46600750	.	+	0	Parent=FBgn0032720.1.mrna1;Target=FBgn0032720.1 1 36 +
ChrX	stalkie_big_nohaplotig	CDS	46600823	46600946	.	+	0	Parent=FBgn0032720.1.mrna1;Target=FBgn0032720.1 37 160 +
ChrX	stalkie_big_nohaplotig	CDS	46601215	46601600	.	+	2	Parent=FBgn0032720.1.mrna1;Target=FBgn0032720.1 161 546 +
ChrX	gffcl	locus	46604413	46606280	.	+	.	ID=RLOC_00002658;geneIDs=FBgn0032721.1.path1;transcripts=FBgn0032721.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46604413	46606280	.	+	.	ID=FBgn0032721.1.mrna1;geneID=FBgn0032721.1.path1;Name=FBgn0032721.1;Dir=sensecoverage=100.0;identity=99.9;matches=1537;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002658
ChrX	stalkie_big_nohaplotig	exon	46604413	46604658	100	+	.	Parent=FBgn0032721.1.mrna1;Target=FBgn0032721.1 1 246 +
ChrX	stalkie_big_nohaplotig	exon	46604718	46604866	100	+	.	Parent=FBgn0032721.1.mrna1;Target=FBgn0032721.1 247 395 +
ChrX	stalkie_big_nohaplotig	exon	46605002	46605740	99	+	.	Parent=FBgn0032721.1.mrna1;Target=FBgn0032721.1 396 1134 +
ChrX	stalkie_big_nohaplotig	exon	46605809	46606137	100	+	.	Parent=FBgn0032721.1.mrna1;Target=FBgn0032721.1 1135 1463 +
ChrX	stalkie_big_nohaplotig	exon	46606205	46606280	100	+	.	Parent=FBgn0032721.1.mrna1;Target=FBgn0032721.1 1464 1539 +
ChrX	stalkie_big_nohaplotig	CDS	46604413	46604658	.	+	0	Parent=FBgn0032721.1.mrna1;Target=FBgn0032721.1 1 246 +
ChrX	stalkie_big_nohaplotig	CDS	46604718	46604866	.	+	0	Parent=FBgn0032721.1.mrna1;Target=FBgn0032721.1 247 395 +
ChrX	stalkie_big_nohaplotig	CDS	46605002	46605740	.	+	1	Parent=FBgn0032721.1.mrna1;Target=FBgn0032721.1 396 1134 +
ChrX	stalkie_big_nohaplotig	CDS	46605809	46606137	.	+	0	Parent=FBgn0032721.1.mrna1;Target=FBgn0032721.1 1135 1463 +
ChrX	stalkie_big_nohaplotig	CDS	46606205	46606280	.	+	1	Parent=FBgn0032721.1.mrna1;Target=FBgn0032721.1 1464 1539 +
ChrX	gffcl	locus	46611728	46615959	.	-	.	ID=RLOC_00002659;geneIDs=FBgn0032719.1.path1;transcripts=FBgn0032719.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46611728	46615959	.	-	.	ID=FBgn0032719.1.mrna1;geneID=FBgn0032719.1.path1;Name=FBgn0032719.1;Dir=sensecoverage=100.0;identity=100.0;matches=993;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002659
ChrX	stalkie_big_nohaplotig	exon	46611728	46611741	100	-	.	Parent=FBgn0032719.1.mrna1;Target=FBgn0032719.1 980 993 +
ChrX	stalkie_big_nohaplotig	exon	46614770	46615052	100	-	.	Parent=FBgn0032719.1.mrna1;Target=FBgn0032719.1 697 979 +
ChrX	stalkie_big_nohaplotig	exon	46615125	46615256	100	-	.	Parent=FBgn0032719.1.mrna1;Target=FBgn0032719.1 565 696 +
ChrX	stalkie_big_nohaplotig	exon	46615315	46615509	100	-	.	Parent=FBgn0032719.1.mrna1;Target=FBgn0032719.1 370 564 +
ChrX	stalkie_big_nohaplotig	exon	46615591	46615959	100	-	.	Parent=FBgn0032719.1.mrna1;Target=FBgn0032719.1 1 369 +
ChrX	stalkie_big_nohaplotig	CDS	46611728	46611741	.	-	2	Parent=FBgn0032719.1.mrna1;Target=FBgn0032719.1 980 993 +
ChrX	stalkie_big_nohaplotig	CDS	46614770	46615052	.	-	0	Parent=FBgn0032719.1.mrna1;Target=FBgn0032719.1 697 979 +
ChrX	stalkie_big_nohaplotig	CDS	46615125	46615256	.	-	0	Parent=FBgn0032719.1.mrna1;Target=FBgn0032719.1 565 696 +
ChrX	stalkie_big_nohaplotig	CDS	46615315	46615509	.	-	0	Parent=FBgn0032719.1.mrna1;Target=FBgn0032719.1 370 564 +
ChrX	stalkie_big_nohaplotig	CDS	46615591	46615959	.	-	0	Parent=FBgn0032719.1.mrna1;Target=FBgn0032719.1 1 369 +
ChrX	gffcl	locus	46634415	46635496	.	-	.	ID=RLOC_00002660;geneIDs=ORF1725.path1;transcripts=ORF1725.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46634415	46635496	.	-	.	ID=ORF1725.mrna1;geneID=ORF1725.path1;Name=ORF1725;Dir=sensecoverage=100.0;identity=99.9;matches=1010;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002660
ChrX	stalkie_big_nohaplotig	exon	46634415	46635362	99	-	.	Parent=ORF1725.mrna1;Target=ORF1725 64 1011 +
ChrX	stalkie_big_nohaplotig	exon	46635434	46635496	100	-	.	Parent=ORF1725.mrna1;Target=ORF1725 1 63 +
ChrX	stalkie_big_nohaplotig	CDS	46634415	46635362	.	-	0	Parent=ORF1725.mrna1;Target=ORF1725 64 1011 +
ChrX	stalkie_big_nohaplotig	CDS	46635434	46635496	.	-	0	Parent=ORF1725.mrna1;Target=ORF1725 1 63 +
ChrX	gffcl	locus	46637875	46642419	.	-	.	ID=RLOC_00002661;geneIDs=FBgn0053120.1.path1;transcripts=FBgn0053120.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46637875	46642419	.	-	.	ID=FBgn0053120.1.mrna1;geneID=FBgn0053120.1.path1;Name=FBgn0053120.1;Dir=sensecoverage=100.0;identity=99.9;matches=2110;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002661
ChrX	stalkie_big_nohaplotig	exon	46637875	46638014	100	-	.	Parent=FBgn0053120.1.mrna1;Target=FBgn0053120.1 1973 2112 +
ChrX	stalkie_big_nohaplotig	exon	46638091	46639468	99	-	.	Parent=FBgn0053120.1.mrna1;Target=FBgn0053120.1 595 1972 +
ChrX	stalkie_big_nohaplotig	exon	46639533	46639725	100	-	.	Parent=FBgn0053120.1.mrna1;Target=FBgn0053120.1 402 594 +
ChrX	stalkie_big_nohaplotig	exon	46639784	46640072	99	-	.	Parent=FBgn0053120.1.mrna1;Target=FBgn0053120.1 113 401 +
ChrX	stalkie_big_nohaplotig	exon	46642247	46642338	100	-	.	Parent=FBgn0053120.1.mrna1;Target=FBgn0053120.1 21 112 +
ChrX	stalkie_big_nohaplotig	exon	46642400	46642419	100	-	.	Parent=FBgn0053120.1.mrna1;Target=FBgn0053120.1 1 20 +
ChrX	stalkie_big_nohaplotig	CDS	46637875	46638014	.	-	2	Parent=FBgn0053120.1.mrna1;Target=FBgn0053120.1 1973 2112 +
ChrX	stalkie_big_nohaplotig	CDS	46638091	46639468	.	-	0	Parent=FBgn0053120.1.mrna1;Target=FBgn0053120.1 595 1972 +
ChrX	stalkie_big_nohaplotig	CDS	46639533	46639725	.	-	1	Parent=FBgn0053120.1.mrna1;Target=FBgn0053120.1 402 594 +
ChrX	stalkie_big_nohaplotig	CDS	46639784	46640072	.	-	2	Parent=FBgn0053120.1.mrna1;Target=FBgn0053120.1 113 401 +
ChrX	stalkie_big_nohaplotig	CDS	46642247	46642338	.	-	1	Parent=FBgn0053120.1.mrna1;Target=FBgn0053120.1 21 112 +
ChrX	stalkie_big_nohaplotig	CDS	46642400	46642419	.	-	0	Parent=FBgn0053120.1.mrna1;Target=FBgn0053120.1 1 20 +
ChrX	gffcl	locus	46647159	46655285	.	+	.	ID=RLOC_00002662;geneIDs=FBgn0031575.1.path1;transcripts=FBgn0031575.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46647159	46655285	.	+	.	ID=FBgn0031575.1.mrna1;geneID=FBgn0031575.1.path1;Name=FBgn0031575.1;Dir=sensecoverage=100.0;identity=99.7;matches=2501;mismatches=6;indels=1;unknowns=0;Target=FBgn0031575.1 3 92 +;locus=RLOC_00002662
ChrX	stalkie_big_nohaplotig	exon	46647159	46647301	99	+	.	Parent=FBgn0031575.1.mrna1;Target=FBgn0031575.1 1 144 +
ChrX	stalkie_big_nohaplotig	exon	46649950	46650210	99	+	.	Parent=FBgn0031575.1.mrna1;Target=FBgn0031575.1 145 405 +
ChrX	stalkie_big_nohaplotig	exon	46650268	46650464	100	+	.	Parent=FBgn0031575.1.mrna1;Target=FBgn0031575.1 406 602 +
ChrX	stalkie_big_nohaplotig	exon	46650537	46650620	100	+	.	Parent=FBgn0031575.1.mrna1;Target=FBgn0031575.1 603 686 +
ChrX	stalkie_big_nohaplotig	exon	46650676	46650950	98	+	.	Parent=FBgn0031575.1.mrna1;Target=FBgn0031575.1 687 961 +
ChrX	stalkie_big_nohaplotig	exon	46651014	46651091	100	+	.	Parent=FBgn0031575.1.mrna1;Target=FBgn0031575.1 962 1039 +
ChrX	stalkie_big_nohaplotig	exon	46651155	46651340	99	+	.	Parent=FBgn0031575.1.mrna1;Target=FBgn0031575.1 1040 1225 +
ChrX	stalkie_big_nohaplotig	exon	46651486	46651656	100	+	.	Parent=FBgn0031575.1.mrna1;Target=FBgn0031575.1 1226 1396 +
ChrX	stalkie_big_nohaplotig	exon	46651717	46652002	100	+	.	Parent=FBgn0031575.1.mrna1;Target=FBgn0031575.1 1397 1682 +
ChrX	stalkie_big_nohaplotig	exon	46652065	46652229	100	+	.	Parent=FBgn0031575.1.mrna1;Target=FBgn0031575.1 1683 1847 +
ChrX	stalkie_big_nohaplotig	exon	46653243	46653495	100	+	.	Parent=FBgn0031575.1.mrna1;Target=FBgn0031575.1 1848 2100 +
ChrX	stalkie_big_nohaplotig	exon	46654878	46655285	100	+	.	Parent=FBgn0031575.1.mrna1;Target=FBgn0031575.1 2101 2508 +
ChrX	stalkie_big_nohaplotig	CDS	46647161	46647249	.	+	0	Parent=FBgn0031575.1.mrna1
ChrX	gffcl	locus	46657303	46676971	.	-	.	ID=RLOC_00002663;geneIDs=FBgn0000256.2.path1;transcripts=FBgn0000256.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46657303	46676971	.	-	.	ID=FBgn0000256.2.mrna1;geneID=FBgn0000256.2.path1;Name=FBgn0000256.2;Dir=sensecoverage=100.0;identity=99.9;matches=2799;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002663
ChrX	stalkie_big_nohaplotig	exon	46657303	46657408	100	-	.	Parent=FBgn0000256.2.mrna1;Target=FBgn0000256.2 2697 2802 +
ChrX	stalkie_big_nohaplotig	exon	46657487	46657784	100	-	.	Parent=FBgn0000256.2.mrna1;Target=FBgn0000256.2 2399 2696 +
ChrX	stalkie_big_nohaplotig	exon	46659132	46660109	100	-	.	Parent=FBgn0000256.2.mrna1;Target=FBgn0000256.2 1421 2398 +
ChrX	stalkie_big_nohaplotig	exon	46662160	46663021	100	-	.	Parent=FBgn0000256.2.mrna1;Target=FBgn0000256.2 559 1420 +
ChrX	stalkie_big_nohaplotig	exon	46664711	46664874	100	-	.	Parent=FBgn0000256.2.mrna1;Target=FBgn0000256.2 395 558 +
ChrX	stalkie_big_nohaplotig	exon	46672904	46673071	99	-	.	Parent=FBgn0000256.2.mrna1;Target=FBgn0000256.2 227 394 +
ChrX	stalkie_big_nohaplotig	exon	46676435	46676550	100	-	.	Parent=FBgn0000256.2.mrna1;Target=FBgn0000256.2 111 226 +
ChrX	stalkie_big_nohaplotig	exon	46676862	46676971	98	-	.	Parent=FBgn0000256.2.mrna1;Target=FBgn0000256.2 1 110 +
ChrX	stalkie_big_nohaplotig	CDS	46657303	46657408	.	-	1	Parent=FBgn0000256.2.mrna1;Target=FBgn0000256.2 2697 2802 +
ChrX	stalkie_big_nohaplotig	CDS	46657487	46657784	.	-	2	Parent=FBgn0000256.2.mrna1;Target=FBgn0000256.2 2399 2696 +
ChrX	stalkie_big_nohaplotig	CDS	46659132	46660109	.	-	2	Parent=FBgn0000256.2.mrna1;Target=FBgn0000256.2 1421 2398 +
ChrX	stalkie_big_nohaplotig	CDS	46662160	46663021	.	-	0	Parent=FBgn0000256.2.mrna1;Target=FBgn0000256.2 559 1420 +
ChrX	stalkie_big_nohaplotig	CDS	46664711	46664874	.	-	2	Parent=FBgn0000256.2.mrna1;Target=FBgn0000256.2 395 558 +
ChrX	stalkie_big_nohaplotig	CDS	46672904	46673071	.	-	2	Parent=FBgn0000256.2.mrna1;Target=FBgn0000256.2 227 394 +
ChrX	stalkie_big_nohaplotig	CDS	46676435	46676550	.	-	1	Parent=FBgn0000256.2.mrna1;Target=FBgn0000256.2 111 226 +
ChrX	stalkie_big_nohaplotig	CDS	46676862	46676971	.	-	0	Parent=FBgn0000256.2.mrna1;Target=FBgn0000256.2 1 110 +
ChrX	gffcl	locus	46667886	46668836	.	+	.	ID=RLOC_00002664;geneIDs=comp153584_c0_seq1.path1;transcripts=comp153584_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46667886	46668836	.	+	.	ID=comp153584_c0_seq1.mrna1;geneID=comp153584_c0_seq1.path1;Name=comp153584_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=949;mismatches=2;indels=0;unknowns=0;Target=comp153584_c0_seq1 951 1 .;CDS_Target=comp153584_c0_seq1 482 288 .;locus=RLOC_00002664
ChrX	stalkie_big_nohaplotig	exon	46667886	46668836	99	+	.	Parent=comp153584_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46668173	46668367	.	+	0	Parent=comp153584_c0_seq1.mrna1
ChrX	gffcl	locus	46679581	46680394	.	-	.	ID=RLOC_00002665;geneIDs=comp69507_c0_seq1.path1;transcripts=comp69507_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46679581	46680394	.	-	.	ID=comp69507_c0_seq1.mrna1;geneID=comp69507_c0_seq1.path1;Name=comp69507_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=814;mismatches=0;indels=0;unknowns=0;Target=comp69507_c0_seq1 814 1 .;CDS_Target=comp69507_c0_seq1 813 682 .;locus=RLOC_00002665
ChrX	stalkie_big_nohaplotig	exon	46679581	46680394	100	-	.	Parent=comp69507_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46679582	46679713	.	-	0	Parent=comp69507_c0_seq1.mrna1
ChrX	gffcl	locus	46697822	46708160	.	-	.	ID=RLOC_00002666;geneIDs=FBgn0020238.2.path1,comp142520_c2_seq1.path1;transcripts=comp142520_c2_seq1.mrna1,FBgn0020238.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46697822	46708160	.	-	.	ID=comp142520_c2_seq1.mrna1;geneID=comp142520_c2_seq1.path1;Name=comp142520_c2_seq1;Dir=sensecoverage=99.4;identity=99.6;matches=1214;mismatches=5;indels=0;unknowns=0;Target=comp142520_c2_seq1 197 1024 +;locus=RLOC_00002666
ChrX	stalkie_big_nohaplotig	exon	46697822	46698872	99	-	.	Parent=comp142520_c2_seq1.mrna1;Target=comp142520_c2_seq1 169 1219 +
ChrX	stalkie_big_nohaplotig	exon	46707993	46708160	100	-	.	Parent=comp142520_c2_seq1.mrna1;Target=comp142520_c2_seq1 1 168 +
ChrX	stalkie_big_nohaplotig	CDS	46698017	46698844	.	-	0	Parent=comp142520_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46698020	46698954	.	-	.	ID=FBgn0020238.2.mrna1;geneID=FBgn0020238.2.path1;Name=FBgn0020238.2;Dir=indeterminatecoverage=98.8;identity=99.4;matches=929;mismatches=5;indels=1;unknowns=0;Target=FBgn0020238.2 945 12 .;CDS_Target=FBgn0020238.2 945 121 .;locus=RLOC_00002666
ChrX	stalkie_big_nohaplotig	exon	46698020	46698954	99	-	.	Parent=FBgn0020238.2.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46698020	46698844	.	-	0	Parent=FBgn0020238.2.mrna1
ChrX	gffcl	locus	46702410	46703440	.	-	.	ID=RLOC_00002667;geneIDs=FBgn0050350.1.path1;transcripts=FBgn0050350.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46702410	46703440	.	-	.	ID=FBgn0050350.1.mrna1;geneID=FBgn0050350.1.path1;Name=FBgn0050350.1;Dir=indeterminatecoverage=99.9;identity=99.6;matches=1027;mismatches=4;indels=0;unknowns=0;Target=FBgn0050350.1 1032 2 .;CDS_Target=FBgn0050350.1 1032 4 .;locus=RLOC_00002667
ChrX	stalkie_big_nohaplotig	exon	46702410	46703440	99	-	.	Parent=FBgn0050350.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46702410	46703438	.	-	0	Parent=FBgn0050350.1.mrna1
ChrX	gffcl	locus	46753832	46758116	.	-	.	ID=RLOC_00002668;geneIDs=ORF1038.path1,comp144298_c0_seq1.path1;transcripts=comp144298_c0_seq1.mrna1,ORF1038.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46753832	46756565	.	-	.	ID=comp144298_c0_seq1.mrna1;geneID=comp144298_c0_seq1.path1;Name=comp144298_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=724;mismatches=0;indels=0;unknowns=0;Target=comp144298_c0_seq1 496 702 +;locus=RLOC_00002668
ChrX	stalkie_big_nohaplotig	exon	46753832	46754531	100	-	.	Parent=comp144298_c0_seq1.mrna1;Target=comp144298_c0_seq1 25 724 +
ChrX	stalkie_big_nohaplotig	exon	46756542	46756565	100	-	.	Parent=comp144298_c0_seq1.mrna1;Target=comp144298_c0_seq1 1 24 +
ChrX	stalkie_big_nohaplotig	CDS	46753854	46754060	.	-	0	Parent=comp144298_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46756565	46758116	.	-	.	ID=ORF1038.mrna1;geneID=ORF1038.path1;Name=ORF1038;Dir=sensecoverage=100.0;identity=100.0;matches=1269;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002668
ChrX	stalkie_big_nohaplotig	exon	46756565	46756933	100	-	.	Parent=ORF1038.mrna1;Target=ORF1038 901 1269 +
ChrX	stalkie_big_nohaplotig	exon	46757043	46757497	100	-	.	Parent=ORF1038.mrna1;Target=ORF1038 446 900 +
ChrX	stalkie_big_nohaplotig	exon	46757556	46757862	100	-	.	Parent=ORF1038.mrna1;Target=ORF1038 139 445 +
ChrX	stalkie_big_nohaplotig	exon	46757979	46758116	100	-	.	Parent=ORF1038.mrna1;Target=ORF1038 1 138 +
ChrX	stalkie_big_nohaplotig	CDS	46756565	46756933	.	-	0	Parent=ORF1038.mrna1;Target=ORF1038 901 1269 +
ChrX	stalkie_big_nohaplotig	CDS	46757043	46757497	.	-	2	Parent=ORF1038.mrna1;Target=ORF1038 446 900 +
ChrX	stalkie_big_nohaplotig	CDS	46757556	46757862	.	-	0	Parent=ORF1038.mrna1;Target=ORF1038 139 445 +
ChrX	stalkie_big_nohaplotig	CDS	46757979	46758116	.	-	0	Parent=ORF1038.mrna1;Target=ORF1038 1 138 +
ChrX	gffcl	locus	46755539	46756300	.	-	.	ID=RLOC_00002669;geneIDs=comp157000_c0_seq1.path1;transcripts=comp157000_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46755539	46756300	.	-	.	ID=comp157000_c0_seq1.mrna1;geneID=comp157000_c0_seq1.path1;Name=comp157000_c0_seq1;Dir=indeterminatecoverage=99.8;identity=93.2;matches=757;mismatches=5;indels=50;unknowns=0;Target=comp157000_c0_seq1 812 1 .;CDS_Target=comp157000_c0_seq1 196 68 .;locus=RLOC_00002669
ChrX	stalkie_big_nohaplotig	exon	46755539	46756300	93	-	.	Parent=comp157000_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46756154	46756233	.	-	0	Parent=comp157000_c0_seq1.mrna1
ChrX	gffcl	locus	46791106	47515113	.	-	.	ID=RLOC_00002670;geneIDs=comp150541_c2_seq1.path1,comp160866_c0_seq1.path1;transcripts=comp150541_c2_seq1.mrna1,comp160866_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46791106	47515113	.	-	.	ID=comp150541_c2_seq1.mrna1;geneID=comp150541_c2_seq1.path1;Name=comp150541_c2_seq1;Dir=indeterminatecoverage=80.5;identity=90.3;matches=648;mismatches=5;indels=65;unknowns=0;Target=comp150541_c2_seq1 599 438 .;locus=RLOC_00002670
ChrX	stalkie_big_nohaplotig	exon	46791106	46791113	100	-	.	Parent=comp150541_c2_seq1.mrna1;Target=comp150541_c2_seq1 681 674 .
ChrX	stalkie_big_nohaplotig	exon	46804059	46804064	100	-	.	Parent=comp150541_c2_seq1.mrna1;Target=comp150541_c2_seq1 673 668 .
ChrX	stalkie_big_nohaplotig	exon	46816261	46816265	100	-	.	Parent=comp150541_c2_seq1.mrna1;Target=comp150541_c2_seq1 667 663 .
ChrX	stalkie_big_nohaplotig	exon	46832050	46832054	100	-	.	Parent=comp150541_c2_seq1.mrna1;Target=comp150541_c2_seq1 662 658 .
ChrX	stalkie_big_nohaplotig	exon	46839552	46839556	100	-	.	Parent=comp150541_c2_seq1.mrna1;Target=comp150541_c2_seq1 657 653 .
ChrX	stalkie_big_nohaplotig	exon	46840243	46840244	100	-	.	Parent=comp150541_c2_seq1.mrna1;Target=comp150541_c2_seq1 652 651 .
ChrX	stalkie_big_nohaplotig	exon	46843871	46843872	100	-	.	Parent=comp150541_c2_seq1.mrna1;Target=comp150541_c2_seq1 650 649 .
ChrX	stalkie_big_nohaplotig	exon	46849516	46849519	100	-	.	Parent=comp150541_c2_seq1.mrna1;Target=comp150541_c2_seq1 648 645 .
ChrX	stalkie_big_nohaplotig	exon	46850027	46850036	100	-	.	Parent=comp150541_c2_seq1.mrna1;Target=comp150541_c2_seq1 644 635 .
ChrX	stalkie_big_nohaplotig	exon	46861028	46861035	100	-	.	Parent=comp150541_c2_seq1.mrna1;Target=comp150541_c2_seq1 633 626 .
ChrX	stalkie_big_nohaplotig	exon	46866028	46866090	39	-	.	Parent=comp150541_c2_seq1.mrna1;Target=comp150541_c2_seq1 625 600 .
ChrX	stalkie_big_nohaplotig	exon	47514543	47515113	94	-	.	Parent=comp150541_c2_seq1.mrna1;Target=comp150541_c2_seq1 599 1 .
ChrX	stalkie_big_nohaplotig	CDS	47514543	47514704	.	-	0	Parent=comp150541_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46848707	46850502	.	-	.	ID=comp160866_c0_seq1.mrna1;geneID=comp160866_c0_seq1.path1;Name=comp160866_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1774;mismatches=22;indels=2;unknowns=0;Target=comp160866_c0_seq1 1798 1 .;CDS_Target=comp160866_c0_seq1 1277 1092 .;locus=RLOC_00002670
ChrX	stalkie_big_nohaplotig	exon	46848707	46850502	98	-	.	Parent=comp160866_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46849227	46849412	.	-	0	Parent=comp160866_c0_seq1.mrna1
ChrX	gffcl	locus	46810567	46845732	.	+	.	ID=RLOC_00002671;geneIDs=FBgn0028906.1.path1;transcripts=FBgn0028906.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46810567	46845732	.	+	.	ID=FBgn0028906.1.mrna1;geneID=FBgn0028906.1.path1;Name=FBgn0028906.1;Dir=sensecoverage=100.0;identity=99.9;matches=1664;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002671
ChrX	stalkie_big_nohaplotig	exon	46810567	46810698	100	+	.	Parent=FBgn0028906.1.mrna1;Target=FBgn0028906.1 1 132 +
ChrX	stalkie_big_nohaplotig	exon	46840503	46840922	99	+	.	Parent=FBgn0028906.1.mrna1;Target=FBgn0028906.1 133 552 +
ChrX	stalkie_big_nohaplotig	exon	46842229	46842429	100	+	.	Parent=FBgn0028906.1.mrna1;Target=FBgn0028906.1 553 753 +
ChrX	stalkie_big_nohaplotig	exon	46844736	46845453	100	+	.	Parent=FBgn0028906.1.mrna1;Target=FBgn0028906.1 754 1471 +
ChrX	stalkie_big_nohaplotig	exon	46845539	46845732	100	+	.	Parent=FBgn0028906.1.mrna1;Target=FBgn0028906.1 1472 1665 +
ChrX	stalkie_big_nohaplotig	CDS	46810567	46810698	.	+	0	Parent=FBgn0028906.1.mrna1;Target=FBgn0028906.1 1 132 +
ChrX	stalkie_big_nohaplotig	CDS	46840503	46840922	.	+	0	Parent=FBgn0028906.1.mrna1;Target=FBgn0028906.1 133 552 +
ChrX	stalkie_big_nohaplotig	CDS	46842229	46842429	.	+	0	Parent=FBgn0028906.1.mrna1;Target=FBgn0028906.1 553 753 +
ChrX	stalkie_big_nohaplotig	CDS	46844736	46845453	.	+	0	Parent=FBgn0028906.1.mrna1;Target=FBgn0028906.1 754 1471 +
ChrX	stalkie_big_nohaplotig	CDS	46845539	46845732	.	+	2	Parent=FBgn0028906.1.mrna1;Target=FBgn0028906.1 1472 1665 +
ChrX	gffcl	locus	46845768	46847078	.	+	.	ID=RLOC_00002672;geneIDs=comp157397_c0_seq1.path1;transcripts=comp157397_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46845768	46847078	.	+	.	ID=comp157397_c0_seq1.mrna1;geneID=comp157397_c0_seq1.path1;Name=comp157397_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1303;mismatches=8;indels=3;unknowns=0;Target=comp157397_c0_seq1 1314 1 .;CDS_Target=comp157397_c0_seq1 232 2 .;locus=RLOC_00002672
ChrX	stalkie_big_nohaplotig	exon	46845768	46847078	99	+	.	Parent=comp157397_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46845769	46845999	.	+	0	Parent=comp157397_c0_seq1.mrna1
ChrX	gffcl	locus	46850500	46851540	.	+	.	ID=RLOC_00002673;geneIDs=comp157420_c0_seq1.path1;transcripts=comp157420_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46850500	46851540	.	+	.	ID=comp157420_c0_seq1.mrna1;geneID=comp157420_c0_seq1.path1;Name=comp157420_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=953;mismatches=12;indels=0;unknowns=0;Target=comp157420_c0_seq1 423 268 .;locus=RLOC_00002673
ChrX	stalkie_big_nohaplotig	exon	46850500	46850524	100	+	.	Parent=comp157420_c0_seq1.mrna1;Target=comp157420_c0_seq1 25 1 .
ChrX	stalkie_big_nohaplotig	exon	46850601	46851540	98	+	.	Parent=comp157420_c0_seq1.mrna1;Target=comp157420_c0_seq1 965 26 .
ChrX	stalkie_big_nohaplotig	CDS	46850843	46850998	.	+	0	Parent=comp157420_c0_seq1.mrna1
ChrX	gffcl	locus	46851811	46923010	.	+	.	ID=RLOC_00002674;geneIDs=comp135179_c1_seq1.path1;transcripts=comp135179_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46851811	46923010	.	+	.	ID=comp135179_c1_seq1.mrna1;geneID=comp135179_c1_seq1.path1;Name=comp135179_c1_seq1;Dir=indeterminatecoverage=65.5;identity=100.0;matches=271;mismatches=0;indels=0;unknowns=0;Target=comp135179_c1_seq1 180 97 .;locus=RLOC_00002674
ChrX	stalkie_big_nohaplotig	exon	46851811	46851996	100	+	.	Parent=comp135179_c1_seq1.mrna1;Target=comp135179_c1_seq1 233 48 .
ChrX	stalkie_big_nohaplotig	exon	46858621	46858630	100	+	.	Parent=comp135179_c1_seq1.mrna1;Target=comp135179_c1_seq1 243 234 .
ChrX	stalkie_big_nohaplotig	exon	46872412	46872418	100	+	.	Parent=comp135179_c1_seq1.mrna1;Target=comp135179_c1_seq1 250 244 .
ChrX	stalkie_big_nohaplotig	exon	46879777	46879783	100	+	.	Parent=comp135179_c1_seq1.mrna1;Target=comp135179_c1_seq1 257 251 .
ChrX	stalkie_big_nohaplotig	exon	46883626	46883630	100	+	.	Parent=comp135179_c1_seq1.mrna1;Target=comp135179_c1_seq1 262 258 .
ChrX	stalkie_big_nohaplotig	exon	46883946	46883950	100	+	.	Parent=comp135179_c1_seq1.mrna1;Target=comp135179_c1_seq1 267 263 .
ChrX	stalkie_big_nohaplotig	exon	46884460	46884467	100	+	.	Parent=comp135179_c1_seq1.mrna1;Target=comp135179_c1_seq1 275 268 .
ChrX	stalkie_big_nohaplotig	exon	46884474	46884481	100	+	.	Parent=comp135179_c1_seq1.mrna1;Target=comp135179_c1_seq1 293 286 .
ChrX	stalkie_big_nohaplotig	exon	46885707	46885713	100	+	.	Parent=comp135179_c1_seq1.mrna1;Target=comp135179_c1_seq1 311 305 .
ChrX	stalkie_big_nohaplotig	exon	46890436	46890437	100	+	.	Parent=comp135179_c1_seq1.mrna1;Target=comp135179_c1_seq1 313 312 .
ChrX	stalkie_big_nohaplotig	exon	46897880	46897881	100	+	.	Parent=comp135179_c1_seq1.mrna1;Target=comp135179_c1_seq1 315 314 .
ChrX	stalkie_big_nohaplotig	exon	46901875	46901877	100	+	.	Parent=comp135179_c1_seq1.mrna1;Target=comp135179_c1_seq1 318 316 .
ChrX	stalkie_big_nohaplotig	exon	46908992	46908995	100	+	.	Parent=comp135179_c1_seq1.mrna1;Target=comp135179_c1_seq1 322 319 .
ChrX	stalkie_big_nohaplotig	exon	46909722	46909724	100	+	.	Parent=comp135179_c1_seq1.mrna1;Target=comp135179_c1_seq1 325 323 .
ChrX	stalkie_big_nohaplotig	exon	46913865	46913868	100	+	.	Parent=comp135179_c1_seq1.mrna1;Target=comp135179_c1_seq1 329 326 .
ChrX	stalkie_big_nohaplotig	exon	46920551	46920553	100	+	.	Parent=comp135179_c1_seq1.mrna1;Target=comp135179_c1_seq1 332 330 .
ChrX	stalkie_big_nohaplotig	exon	46923004	46923010	100	+	.	Parent=comp135179_c1_seq1.mrna1;Target=comp135179_c1_seq1 339 333 .
ChrX	stalkie_big_nohaplotig	CDS	46851860	46851943	.	+	0	Parent=comp135179_c1_seq1.mrna1
ChrX	gffcl	locus	46876674	46885088	.	-	.	ID=RLOC_00002675;geneIDs=FBgn0032156.1.path1;transcripts=FBgn0032156.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46876674	46885088	.	-	.	ID=FBgn0032156.1.mrna1;geneID=FBgn0032156.1.path1;Name=FBgn0032156.1;Dir=sensecoverage=100.0;identity=100.0;matches=1683;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002675
ChrX	stalkie_big_nohaplotig	exon	46876674	46876895	100	-	.	Parent=FBgn0032156.1.mrna1;Target=FBgn0032156.1 1462 1683 +
ChrX	stalkie_big_nohaplotig	exon	46876961	46877173	100	-	.	Parent=FBgn0032156.1.mrna1;Target=FBgn0032156.1 1249 1461 +
ChrX	stalkie_big_nohaplotig	exon	46878359	46878889	100	-	.	Parent=FBgn0032156.1.mrna1;Target=FBgn0032156.1 718 1248 +
ChrX	stalkie_big_nohaplotig	exon	46878948	46879236	100	-	.	Parent=FBgn0032156.1.mrna1;Target=FBgn0032156.1 429 717 +
ChrX	stalkie_big_nohaplotig	exon	46879316	46879415	100	-	.	Parent=FBgn0032156.1.mrna1;Target=FBgn0032156.1 329 428 +
ChrX	stalkie_big_nohaplotig	exon	46884025	46884127	100	-	.	Parent=FBgn0032156.1.mrna1;Target=FBgn0032156.1 226 328 +
ChrX	stalkie_big_nohaplotig	exon	46884864	46885088	100	-	.	Parent=FBgn0032156.1.mrna1;Target=FBgn0032156.1 1 225 +
ChrX	stalkie_big_nohaplotig	CDS	46876674	46876895	.	-	0	Parent=FBgn0032156.1.mrna1;Target=FBgn0032156.1 1462 1683 +
ChrX	stalkie_big_nohaplotig	CDS	46876961	46877173	.	-	0	Parent=FBgn0032156.1.mrna1;Target=FBgn0032156.1 1249 1461 +
ChrX	stalkie_big_nohaplotig	CDS	46878359	46878889	.	-	0	Parent=FBgn0032156.1.mrna1;Target=FBgn0032156.1 718 1248 +
ChrX	stalkie_big_nohaplotig	CDS	46878948	46879236	.	-	1	Parent=FBgn0032156.1.mrna1;Target=FBgn0032156.1 429 717 +
ChrX	stalkie_big_nohaplotig	CDS	46879316	46879415	.	-	2	Parent=FBgn0032156.1.mrna1;Target=FBgn0032156.1 329 428 +
ChrX	stalkie_big_nohaplotig	CDS	46884025	46884127	.	-	0	Parent=FBgn0032156.1.mrna1;Target=FBgn0032156.1 226 328 +
ChrX	stalkie_big_nohaplotig	CDS	46884864	46885088	.	-	0	Parent=FBgn0032156.1.mrna1;Target=FBgn0032156.1 1 225 +
ChrX	gffcl	locus	46900437	46907956	.	-	.	ID=RLOC_00002677;geneIDs=FBgn0032157.1.path1;transcripts=FBgn0032157.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46900437	46907956	.	-	.	ID=FBgn0032157.1.mrna1;geneID=FBgn0032157.1.path1;Name=FBgn0032157.1;Dir=sensecoverage=100.0;identity=100.0;matches=2513;mismatches=0;indels=1;unknowns=0;locus=RLOC_00002677
ChrX	stalkie_big_nohaplotig	exon	46900437	46901045	100	-	.	Parent=FBgn0032157.1.mrna1;Target=FBgn0032157.1 1906 2514 +
ChrX	stalkie_big_nohaplotig	exon	46901110	46901409	100	-	.	Parent=FBgn0032157.1.mrna1;Target=FBgn0032157.1 1606 1905 +
ChrX	stalkie_big_nohaplotig	exon	46902638	46902784	100	-	.	Parent=FBgn0032157.1.mrna1;Target=FBgn0032157.1 1459 1605 +
ChrX	stalkie_big_nohaplotig	exon	46902844	46903111	100	-	.	Parent=FBgn0032157.1.mrna1;Target=FBgn0032157.1 1191 1458 +
ChrX	stalkie_big_nohaplotig	exon	46903173	46903505	100	-	.	Parent=FBgn0032157.1.mrna1;Target=FBgn0032157.1 858 1190 +
ChrX	stalkie_big_nohaplotig	exon	46903804	46904465	100	-	.	Parent=FBgn0032157.1.mrna1;Target=FBgn0032157.1 196 857 +
ChrX	stalkie_big_nohaplotig	exon	46907675	46907832	99	-	.	Parent=FBgn0032157.1.mrna1;Target=FBgn0032157.1 37 195 +
ChrX	stalkie_big_nohaplotig	exon	46907921	46907956	100	-	.	Parent=FBgn0032157.1.mrna1;Target=FBgn0032157.1 1 36 +
ChrX	stalkie_big_nohaplotig	CDS	46907790	46907832	.	-	2	Parent=FBgn0032157.1.mrna1;Target=FBgn0032157.1 37 80 +
ChrX	stalkie_big_nohaplotig	CDS	46907921	46907954	.	-	0	Parent=FBgn0032157.1.mrna1;Target=FBgn0032157.1 3 36 +
ChrX	gffcl	locus	46912752	46915544	.	+	.	ID=RLOC_00002678;geneIDs=FBgn0040064.1.path1,comp94707_c0_seq1.path1;transcripts=comp94707_c0_seq1.mrna1,FBgn0040064.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46912752	46913045	.	+	.	ID=comp94707_c0_seq1.mrna1;geneID=comp94707_c0_seq1.path1;Name=comp94707_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=294;mismatches=0;indels=0;unknowns=0;Target=comp94707_c0_seq1 294 1 .;CDS_Target=comp94707_c0_seq1 130 2 .;locus=RLOC_00002678
ChrX	stalkie_big_nohaplotig	exon	46912752	46913045	100	+	.	Parent=comp94707_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46912753	46912881	.	+	0	Parent=comp94707_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46912753	46915544	.	+	.	ID=FBgn0040064.1.mrna1;geneID=FBgn0040064.1.path1;Name=FBgn0040064.1;Dir=sensecoverage=100.0;identity=99.9;matches=1205;mismatches=0;indels=1;unknowns=0;locus=RLOC_00002678
ChrX	stalkie_big_nohaplotig	exon	46912753	46912774	100	+	.	Parent=FBgn0040064.1.mrna1;Target=FBgn0040064.1 1 22 +
ChrX	stalkie_big_nohaplotig	exon	46913025	46913191	100	+	.	Parent=FBgn0040064.1.mrna1;Target=FBgn0040064.1 23 189 +
ChrX	stalkie_big_nohaplotig	exon	46913255	46913827	100	+	.	Parent=FBgn0040064.1.mrna1;Target=FBgn0040064.1 190 762 +
ChrX	stalkie_big_nohaplotig	exon	46914966	46915166	100	+	.	Parent=FBgn0040064.1.mrna1;Target=FBgn0040064.1 763 963 +
ChrX	stalkie_big_nohaplotig	exon	46915234	46915388	100	+	.	Parent=FBgn0040064.1.mrna1;Target=FBgn0040064.1 964 1118 +
ChrX	stalkie_big_nohaplotig	exon	46915458	46915544	98	+	.	Parent=FBgn0040064.1.mrna1;Target=FBgn0040064.1 1119 1206 +
ChrX	stalkie_big_nohaplotig	CDS	46912753	46912774	.	+	0	Parent=FBgn0040064.1.mrna1;Target=FBgn0040064.1 1 22 +
ChrX	stalkie_big_nohaplotig	CDS	46913025	46913191	.	+	2	Parent=FBgn0040064.1.mrna1;Target=FBgn0040064.1 23 189 +
ChrX	stalkie_big_nohaplotig	CDS	46913255	46913827	.	+	0	Parent=FBgn0040064.1.mrna1;Target=FBgn0040064.1 190 762 +
ChrX	stalkie_big_nohaplotig	CDS	46914966	46915166	.	+	0	Parent=FBgn0040064.1.mrna1;Target=FBgn0040064.1 763 963 +
ChrX	stalkie_big_nohaplotig	CDS	46915234	46915388	.	+	0	Parent=FBgn0040064.1.mrna1;Target=FBgn0040064.1 964 1118 +
ChrX	stalkie_big_nohaplotig	CDS	46915458	46915544	.	+	1	Parent=FBgn0040064.1.mrna1;Target=FBgn0040064.1 1119 1206 +
ChrX	gffcl	locus	46920921	46921581	.	+	.	ID=RLOC_00002679;geneIDs=FBgn0025700.1.path1;transcripts=FBgn0025700.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46920921	46921581	.	+	.	ID=FBgn0025700.1.mrna1;geneID=FBgn0025700.1.path1;Name=FBgn0025700.1;Dir=sensecoverage=100.0;identity=100.0;matches=594;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002679
ChrX	stalkie_big_nohaplotig	exon	46920921	46921092	100	+	.	Parent=FBgn0025700.1.mrna1;Target=FBgn0025700.1 1 172 +
ChrX	stalkie_big_nohaplotig	exon	46921160	46921581	100	+	.	Parent=FBgn0025700.1.mrna1;Target=FBgn0025700.1 173 594 +
ChrX	stalkie_big_nohaplotig	CDS	46920921	46921092	.	+	0	Parent=FBgn0025700.1.mrna1;Target=FBgn0025700.1 1 172 +
ChrX	stalkie_big_nohaplotig	CDS	46921160	46921581	.	+	2	Parent=FBgn0025700.1.mrna1;Target=FBgn0025700.1 173 594 +
ChrX	gffcl	locus	46926238	46930324	.	-	.	ID=RLOC_00002680;geneIDs=FBgn0032163.1.path1;transcripts=FBgn0032163.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46926238	46930324	.	-	.	ID=FBgn0032163.1.mrna1;geneID=FBgn0032163.1.path1;Name=FBgn0032163.1;Dir=sensecoverage=100.0;identity=99.4;matches=1739;mismatches=10;indels=0;unknowns=0;locus=RLOC_00002680
ChrX	stalkie_big_nohaplotig	exon	46926238	46926358	100	-	.	Parent=FBgn0032163.1.mrna1;Target=FBgn0032163.1 1629 1749 +
ChrX	stalkie_big_nohaplotig	exon	46926422	46926756	99	-	.	Parent=FBgn0032163.1.mrna1;Target=FBgn0032163.1 1294 1628 +
ChrX	stalkie_big_nohaplotig	exon	46926968	46927523	99	-	.	Parent=FBgn0032163.1.mrna1;Target=FBgn0032163.1 738 1293 +
ChrX	stalkie_big_nohaplotig	exon	46927580	46927758	98	-	.	Parent=FBgn0032163.1.mrna1;Target=FBgn0032163.1 559 737 +
ChrX	stalkie_big_nohaplotig	exon	46927826	46928109	100	-	.	Parent=FBgn0032163.1.mrna1;Target=FBgn0032163.1 275 558 +
ChrX	stalkie_big_nohaplotig	exon	46929720	46929906	98	-	.	Parent=FBgn0032163.1.mrna1;Target=FBgn0032163.1 88 274 +
ChrX	stalkie_big_nohaplotig	exon	46930238	46930324	100	-	.	Parent=FBgn0032163.1.mrna1;Target=FBgn0032163.1 1 87 +
ChrX	stalkie_big_nohaplotig	CDS	46926238	46926358	.	-	1	Parent=FBgn0032163.1.mrna1;Target=FBgn0032163.1 1629 1749 +
ChrX	stalkie_big_nohaplotig	CDS	46926422	46926756	.	-	0	Parent=FBgn0032163.1.mrna1;Target=FBgn0032163.1 1294 1628 +
ChrX	stalkie_big_nohaplotig	CDS	46926968	46927523	.	-	1	Parent=FBgn0032163.1.mrna1;Target=FBgn0032163.1 738 1293 +
ChrX	stalkie_big_nohaplotig	CDS	46927580	46927758	.	-	0	Parent=FBgn0032163.1.mrna1;Target=FBgn0032163.1 559 737 +
ChrX	stalkie_big_nohaplotig	CDS	46927826	46928109	.	-	2	Parent=FBgn0032163.1.mrna1;Target=FBgn0032163.1 275 558 +
ChrX	stalkie_big_nohaplotig	CDS	46929720	46929906	.	-	0	Parent=FBgn0032163.1.mrna1;Target=FBgn0032163.1 88 274 +
ChrX	stalkie_big_nohaplotig	CDS	46930238	46930324	.	-	0	Parent=FBgn0032163.1.mrna1;Target=FBgn0032163.1 1 87 +
ChrX	gffcl	locus	46949874	46950537	.	+	.	ID=RLOC_00002681;geneIDs=comp136491_c0_seq1.path1;transcripts=comp136491_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46949874	46950537	.	+	.	ID=comp136491_c0_seq1.mrna1;geneID=comp136491_c0_seq1.path1;Name=comp136491_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.4;matches=661;mismatches=3;indels=1;unknowns=0;Target=comp136491_c0_seq1 665 1 .;CDS_Target=comp136491_c0_seq1 397 299 .;locus=RLOC_00002681
ChrX	stalkie_big_nohaplotig	exon	46949874	46950537	99	+	.	Parent=comp136491_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46950172	46950270	.	+	0	Parent=comp136491_c0_seq1.mrna1
ChrX	gffcl	locus	46951186	46951663	.	+	.	ID=RLOC_00002682;geneIDs=FBgn0259713.1.path1;transcripts=FBgn0259713.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46951186	46951663	.	+	.	ID=FBgn0259713.1.mrna1;geneID=FBgn0259713.1.path1;Name=FBgn0259713.1;Dir=sensecoverage=100.0;identity=98.8;matches=412;mismatches=5;indels=0;unknowns=0;locus=RLOC_00002682
ChrX	stalkie_big_nohaplotig	exon	46951186	46951233	100	+	.	Parent=FBgn0259713.1.mrna1;Target=FBgn0259713.1 1 48 +
ChrX	stalkie_big_nohaplotig	exon	46951295	46951663	98	+	.	Parent=FBgn0259713.1.mrna1;Target=FBgn0259713.1 49 417 +
ChrX	stalkie_big_nohaplotig	CDS	46951186	46951233	.	+	0	Parent=FBgn0259713.1.mrna1;Target=FBgn0259713.1 1 48 +
ChrX	stalkie_big_nohaplotig	CDS	46951295	46951663	.	+	0	Parent=FBgn0259713.1.mrna1;Target=FBgn0259713.1 49 417 +
ChrX	gffcl	locus	46953354	46955053	.	-	.	ID=RLOC_00002683;geneIDs=comp153064_c0_seq1.path1;transcripts=comp153064_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46953354	46955053	.	-	.	ID=comp153064_c0_seq1.mrna1;geneID=comp153064_c0_seq1.path1;Name=comp153064_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.5;matches=1692;mismatches=8;indels=0;unknowns=0;Target=comp153064_c0_seq1 1729 30 .;CDS_Target=comp153064_c0_seq1 1205 153 .;locus=RLOC_00002683
ChrX	stalkie_big_nohaplotig	exon	46953354	46955053	99	-	.	Parent=comp153064_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46953878	46954930	.	-	0	Parent=comp153064_c0_seq1.mrna1
ChrX	gffcl	locus	46972933	46980563	.	+	.	ID=RLOC_00002684;geneIDs=FBgn0032123.1.path1;transcripts=FBgn0032123.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46972933	46980563	.	+	.	ID=FBgn0032123.1.mrna1;geneID=FBgn0032123.1.path1;Name=FBgn0032123.1;Dir=sensecoverage=100.0;identity=99.9;matches=3774;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002684
ChrX	stalkie_big_nohaplotig	exon	46972933	46973165	99	+	.	Parent=FBgn0032123.1.mrna1;Target=FBgn0032123.1 1 233 +
ChrX	stalkie_big_nohaplotig	exon	46976108	46976763	99	+	.	Parent=FBgn0032123.1.mrna1;Target=FBgn0032123.1 234 889 +
ChrX	stalkie_big_nohaplotig	exon	46976949	46977413	100	+	.	Parent=FBgn0032123.1.mrna1;Target=FBgn0032123.1 890 1354 +
ChrX	stalkie_big_nohaplotig	exon	46977506	46977606	100	+	.	Parent=FBgn0032123.1.mrna1;Target=FBgn0032123.1 1355 1455 +
ChrX	stalkie_big_nohaplotig	exon	46977702	46977891	100	+	.	Parent=FBgn0032123.1.mrna1;Target=FBgn0032123.1 1456 1645 +
ChrX	stalkie_big_nohaplotig	exon	46977947	46978486	100	+	.	Parent=FBgn0032123.1.mrna1;Target=FBgn0032123.1 1646 2185 +
ChrX	stalkie_big_nohaplotig	exon	46978561	46978975	100	+	.	Parent=FBgn0032123.1.mrna1;Target=FBgn0032123.1 2186 2600 +
ChrX	stalkie_big_nohaplotig	exon	46979042	46979193	100	+	.	Parent=FBgn0032123.1.mrna1;Target=FBgn0032123.1 2601 2752 +
ChrX	stalkie_big_nohaplotig	exon	46979467	46979590	100	+	.	Parent=FBgn0032123.1.mrna1;Target=FBgn0032123.1 2753 2876 +
ChrX	stalkie_big_nohaplotig	exon	46979663	46980563	100	+	.	Parent=FBgn0032123.1.mrna1;Target=FBgn0032123.1 2877 3777 +
ChrX	stalkie_big_nohaplotig	CDS	46972933	46973165	.	+	0	Parent=FBgn0032123.1.mrna1;Target=FBgn0032123.1 1 233 +
ChrX	stalkie_big_nohaplotig	CDS	46976108	46976763	.	+	1	Parent=FBgn0032123.1.mrna1;Target=FBgn0032123.1 234 889 +
ChrX	stalkie_big_nohaplotig	CDS	46976949	46977413	.	+	2	Parent=FBgn0032123.1.mrna1;Target=FBgn0032123.1 890 1354 +
ChrX	stalkie_big_nohaplotig	CDS	46977506	46977606	.	+	2	Parent=FBgn0032123.1.mrna1;Target=FBgn0032123.1 1355 1455 +
ChrX	stalkie_big_nohaplotig	CDS	46977702	46977891	.	+	0	Parent=FBgn0032123.1.mrna1;Target=FBgn0032123.1 1456 1645 +
ChrX	stalkie_big_nohaplotig	CDS	46977947	46978486	.	+	2	Parent=FBgn0032123.1.mrna1;Target=FBgn0032123.1 1646 2185 +
ChrX	stalkie_big_nohaplotig	CDS	46978561	46978975	.	+	2	Parent=FBgn0032123.1.mrna1;Target=FBgn0032123.1 2186 2600 +
ChrX	stalkie_big_nohaplotig	CDS	46979042	46979193	.	+	1	Parent=FBgn0032123.1.mrna1;Target=FBgn0032123.1 2601 2752 +
ChrX	stalkie_big_nohaplotig	CDS	46979467	46979590	.	+	2	Parent=FBgn0032123.1.mrna1;Target=FBgn0032123.1 2753 2876 +
ChrX	stalkie_big_nohaplotig	CDS	46979663	46980563	.	+	1	Parent=FBgn0032123.1.mrna1;Target=FBgn0032123.1 2877 3777 +
ChrX	gffcl	locus	46981181	46983544	.	-	.	ID=RLOC_00002685;geneIDs=comp162253_c0_seq1.path1;transcripts=comp162253_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46981181	46983544	.	-	.	ID=comp162253_c0_seq1.mrna1;geneID=comp162253_c0_seq1.path1;Name=comp162253_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=2355;mismatches=9;indels=4;unknowns=0;Target=comp162253_c0_seq1 2368 1 .;CDS_Target=comp162253_c0_seq1 704 573 .;locus=RLOC_00002685
ChrX	stalkie_big_nohaplotig	exon	46981181	46983544	99	-	.	Parent=comp162253_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46982843	46982974	.	-	0	Parent=comp162253_c0_seq1.mrna1
ChrX	gffcl	locus	46983636	47023113	.	-	.	ID=RLOC_00002686;geneIDs=comp135518_c0_seq1.path1;transcripts=comp135518_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46983636	47023113	.	-	.	ID=comp135518_c0_seq1.mrna1;geneID=comp135518_c0_seq1.path1;Name=comp135518_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.9;matches=440;mismatches=19;indels=0;unknowns=0;Target=comp135518_c0_seq1 58 2 .;locus=RLOC_00002686
ChrX	stalkie_big_nohaplotig	exon	46983636	46984017	98	-	.	Parent=comp135518_c0_seq1.mrna1;Target=comp135518_c0_seq1 459 78 .
ChrX	stalkie_big_nohaplotig	exon	47023037	47023113	84	-	.	Parent=comp135518_c0_seq1.mrna1;Target=comp135518_c0_seq1 77 1 .
ChrX	stalkie_big_nohaplotig	CDS	47023056	47023112	.	-	0	Parent=comp135518_c0_seq1.mrna1
ChrX	gffcl	locus	46985534	46985999	.	-	.	ID=RLOC_00002687;geneIDs=comp161459_c2_seq1.path1;transcripts=comp161459_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46985534	46985999	.	-	.	ID=comp161459_c2_seq1.mrna1;geneID=comp161459_c2_seq1.path1;Name=comp161459_c2_seq1;Dir=indeterminatecoverage=99.8;identity=98.7;matches=460;mismatches=6;indels=0;unknowns=0;Target=comp161459_c2_seq1 467 2 .;CDS_Target=comp161459_c2_seq1 438 316 .;locus=RLOC_00002687
ChrX	stalkie_big_nohaplotig	exon	46985534	46985999	98	-	.	Parent=comp161459_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46985563	46985685	.	-	0	Parent=comp161459_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46987180	47089522	.	-	.	ID=comp160767_c0_seq1.mrna1;geneID=comp160767_c0_seq1.path1;Name=comp160767_c0_seq1;Dir=indeterminatecoverage=51.4;identity=80.2;matches=668;mismatches=72;indels=93;unknowns=0;Target=comp160767_c0_seq1 1478 1353 .;locus=RLOC_00002688
ChrX	stalkie_big_nohaplotig	exon	46987180	46987624	91	-	.	Parent=comp160767_c0_seq1.mrna1;Target=comp160767_c0_seq1 1747 1270 .
ChrX	stalkie_big_nohaplotig	exon	46987632	46987639	100	-	.	Parent=comp160767_c0_seq1.mrna1;Target=comp160767_c0_seq1 1208 1201 .
ChrX	stalkie_big_nohaplotig	exon	46988079	46988086	100	-	.	Parent=comp160767_c0_seq1.mrna1;Target=comp160767_c0_seq1 1193 1186 .
ChrX	stalkie_big_nohaplotig	exon	46988666	46988672	100	-	.	Parent=comp160767_c0_seq1.mrna1;Target=comp160767_c0_seq1 1185 1179 .
ChrX	stalkie_big_nohaplotig	exon	46988798	46988801	100	-	.	Parent=comp160767_c0_seq1.mrna1;Target=comp160767_c0_seq1 1178 1175 .
ChrX	stalkie_big_nohaplotig	exon	46989951	46989959	100	-	.	Parent=comp160767_c0_seq1.mrna1;Target=comp160767_c0_seq1 1174 1166 .
ChrX	stalkie_big_nohaplotig	exon	47003394	47003399	83	-	.	Parent=comp160767_c0_seq1.mrna1;Target=comp160767_c0_seq1 1165 1160 .
ChrX	stalkie_big_nohaplotig	exon	47011507	47011508	100	-	.	Parent=comp160767_c0_seq1.mrna1;Target=comp160767_c0_seq1 1159 1158 .
ChrX	stalkie_big_nohaplotig	exon	47018826	47018856	59	-	.	Parent=comp160767_c0_seq1.mrna1;Target=comp160767_c0_seq1 1157 1121 .
ChrX	stalkie_big_nohaplotig	exon	47022796	47022835	47	-	.	Parent=comp160767_c0_seq1.mrna1;Target=comp160767_c0_seq1 1120 1064 .
ChrX	stalkie_big_nohaplotig	exon	47043334	47043387	51	-	.	Parent=comp160767_c0_seq1.mrna1;Target=comp160767_c0_seq1 1063 1009 .
ChrX	stalkie_big_nohaplotig	exon	47052434	47052447	100	-	.	Parent=comp160767_c0_seq1.mrna1;Target=comp160767_c0_seq1 1008 995 .
ChrX	stalkie_big_nohaplotig	exon	47053972	47053992	54	-	.	Parent=comp160767_c0_seq1.mrna1;Target=comp160767_c0_seq1 994 962 .
ChrX	stalkie_big_nohaplotig	exon	47054320	47054368	52	-	.	Parent=comp160767_c0_seq1.mrna1;Target=comp160767_c0_seq1 961 895 .
ChrX	stalkie_big_nohaplotig	exon	47060332	47060346	66	-	.	Parent=comp160767_c0_seq1.mrna1;Target=comp160767_c0_seq1 894 880 .
ChrX	stalkie_big_nohaplotig	exon	47061171	47061176	100	-	.	Parent=comp160767_c0_seq1.mrna1;Target=comp160767_c0_seq1 879 874 .
ChrX	stalkie_big_nohaplotig	exon	47068621	47068629	100	-	.	Parent=comp160767_c0_seq1.mrna1;Target=comp160767_c0_seq1 873 865 .
ChrX	stalkie_big_nohaplotig	exon	47082451	47082454	100	-	.	Parent=comp160767_c0_seq1.mrna1;Target=comp160767_c0_seq1 864 861 .
ChrX	stalkie_big_nohaplotig	exon	47089512	47089522	100	-	.	Parent=comp160767_c0_seq1.mrna1;Target=comp160767_c0_seq1 860 850 .
ChrX	stalkie_big_nohaplotig	CDS	46987416	46987541	.	-	0	Parent=comp160767_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	46988156	46988669	.	-	.	ID=comp146425_c0_seq1.mrna1;geneID=comp146425_c0_seq1.path1;Name=comp146425_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=513;mismatches=1;indels=0;unknowns=0;Target=comp146425_c0_seq1 514 1 .;CDS_Target=comp146425_c0_seq1 61 2 .;locus=RLOC_00002688
ChrX	stalkie_big_nohaplotig	exon	46988156	46988669	99	-	.	Parent=comp146425_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	46988609	46988668	.	-	0	Parent=comp146425_c0_seq1.mrna1
ChrX	gffcl	locus	47070817	47071779	.	+	.	ID=RLOC_00002690;geneIDs=comp162541_c0_seq1.path1;transcripts=comp162541_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47070817	47071779	.	+	.	ID=comp162541_c0_seq1.mrna1;geneID=comp162541_c0_seq1.path1;Name=comp162541_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=954;mismatches=9;indels=0;unknowns=0;Target=comp162541_c0_seq1 963 1 .;CDS_Target=comp162541_c0_seq1 891 697 .;locus=RLOC_00002690
ChrX	stalkie_big_nohaplotig	exon	47070817	47071779	99	+	.	Parent=comp162541_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47071513	47071707	.	+	0	Parent=comp162541_c0_seq1.mrna1
ChrX	gffcl	locus	47071830	47072113	.	-	.	ID=RLOC_00002691;geneIDs=comp147983_c0_seq1.path1;transcripts=comp147983_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47071830	47072113	.	-	.	ID=comp147983_c0_seq1.mrna1;geneID=comp147983_c0_seq1.path1;Name=comp147983_c0_seq1;Dir=indeterminatecoverage=100.0;identity=86.4;matches=279;mismatches=5;indels=39;unknowns=0;Target=comp147983_c0_seq1 323 1 .;CDS_Target=comp147983_c0_seq1 71 3 .;locus=RLOC_00002691
ChrX	stalkie_big_nohaplotig	exon	47071830	47072113	86	-	.	Parent=comp147983_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47072043	47072111	.	-	0	Parent=comp147983_c0_seq1.mrna1
ChrX	gffcl	locus	47075046	47075706	.	-	.	ID=RLOC_00002692;geneIDs=comp146079_c0_seq1.path1;transcripts=comp146079_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47075046	47075706	.	-	.	ID=comp146079_c0_seq1.mrna1;geneID=comp146079_c0_seq1.path1;Name=comp146079_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=659;mismatches=2;indels=0;unknowns=0;Target=comp146079_c0_seq1 661 1 .;CDS_Target=comp146079_c0_seq1 475 413 .;locus=RLOC_00002692
ChrX	stalkie_big_nohaplotig	exon	47075046	47075706	99	-	.	Parent=comp146079_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47075232	47075294	.	-	0	Parent=comp146079_c0_seq1.mrna1
ChrX	gffcl	locus	47077816	47078166	.	+	.	ID=RLOC_00002693;geneIDs=comp138864_c0_seq1.path1;transcripts=comp138864_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47077816	47078166	.	+	.	ID=comp138864_c0_seq1.mrna1;geneID=comp138864_c0_seq1.path1;Name=comp138864_c0_seq1;Dir=indeterminatecoverage=99.0;identity=96.9;matches=280;mismatches=9;indels=0;unknowns=0;Target=comp138864_c0_seq1 73 2 .;locus=RLOC_00002693
ChrX	stalkie_big_nohaplotig	exon	47077816	47078071	98	+	.	Parent=comp138864_c0_seq1.mrna1;Target=comp138864_c0_seq1 256 1 .
ChrX	stalkie_big_nohaplotig	exon	47078134	47078166	87	+	.	Parent=comp138864_c0_seq1.mrna1;Target=comp138864_c0_seq1 289 257 .
ChrX	stalkie_big_nohaplotig	CDS	47077817	47077888	.	+	0	Parent=comp138864_c0_seq1.mrna1
ChrX	gffcl	locus	47080139	47080470	.	-	.	ID=RLOC_00002694;geneIDs=comp147480_c0_seq1.path1;transcripts=comp147480_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47080139	47080470	.	-	.	ID=comp147480_c0_seq1.mrna1;geneID=comp147480_c0_seq1.path1;Name=comp147480_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=331;mismatches=1;indels=0;unknowns=0;Target=comp147480_c0_seq1 332 1 .;CDS_Target=comp147480_c0_seq1 118 2 .;locus=RLOC_00002694
ChrX	stalkie_big_nohaplotig	exon	47080139	47080470	99	-	.	Parent=comp147480_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47080353	47080469	.	-	0	Parent=comp147480_c0_seq1.mrna1
ChrX	gffcl	locus	47080871	47098921	.	+	.	ID=RLOC_00002695;geneIDs=comp148506_c1_seq1.path1;transcripts=comp148506_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47080871	47098921	.	+	.	ID=comp148506_c1_seq1.mrna1;geneID=comp148506_c1_seq1.path1;Name=comp148506_c1_seq1;Dir=indeterminatecoverage=84.5;identity=91.2;matches=664;mismatches=33;indels=31;unknowns=0;Target=comp148506_c1_seq1 169 77 .;locus=RLOC_00002695
ChrX	stalkie_big_nohaplotig	exon	47080871	47081385	100	+	.	Parent=comp148506_c1_seq1.mrna1;Target=comp148506_c1_seq1 515 1 .
ChrX	stalkie_big_nohaplotig	exon	47081838	47081849	91	+	.	Parent=comp148506_c1_seq1.mrna1;Target=comp148506_c1_seq1 527 516 .
ChrX	stalkie_big_nohaplotig	exon	47082463	47082471	100	+	.	Parent=comp148506_c1_seq1.mrna1;Target=comp148506_c1_seq1 536 528 .
ChrX	stalkie_big_nohaplotig	exon	47083076	47083134	45	+	.	Parent=comp148506_c1_seq1.mrna1;Target=comp148506_c1_seq1 609 557 .
ChrX	stalkie_big_nohaplotig	exon	47085604	47085611	100	+	.	Parent=comp148506_c1_seq1.mrna1;Target=comp148506_c1_seq1 617 610 .
ChrX	stalkie_big_nohaplotig	exon	47085629	47085635	100	+	.	Parent=comp148506_c1_seq1.mrna1;Target=comp148506_c1_seq1 666 660 .
ChrX	stalkie_big_nohaplotig	exon	47086305	47086309	100	+	.	Parent=comp148506_c1_seq1.mrna1;Target=comp148506_c1_seq1 671 667 .
ChrX	stalkie_big_nohaplotig	exon	47086613	47086614	100	+	.	Parent=comp148506_c1_seq1.mrna1;Target=comp148506_c1_seq1 673 672 .
ChrX	stalkie_big_nohaplotig	exon	47086947	47086952	100	+	.	Parent=comp148506_c1_seq1.mrna1;Target=comp148506_c1_seq1 679 674 .
ChrX	stalkie_big_nohaplotig	exon	47087466	47087483	77	+	.	Parent=comp148506_c1_seq1.mrna1;Target=comp148506_c1_seq1 697 680 .
ChrX	stalkie_big_nohaplotig	exon	47089471	47089472	100	+	.	Parent=comp148506_c1_seq1.mrna1;Target=comp148506_c1_seq1 765 764 .
ChrX	stalkie_big_nohaplotig	exon	47091158	47091176	45	+	.	Parent=comp148506_c1_seq1.mrna1;Target=comp148506_c1_seq1 807 766 .
ChrX	stalkie_big_nohaplotig	exon	47098881	47098921	92	+	.	Parent=comp148506_c1_seq1.mrna1;Target=comp148506_c1_seq1 853 813 .
ChrX	stalkie_big_nohaplotig	CDS	47080947	47081039	.	+	0	Parent=comp148506_c1_seq1.mrna1
ChrX	gffcl	locus	47104078	47105010	.	+	.	ID=RLOC_00002696;geneIDs=comp155433_c1_seq1.path1;transcripts=comp155433_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47104078	47105010	.	+	.	ID=comp155433_c1_seq1.mrna1;geneID=comp155433_c1_seq1.path1;Name=comp155433_c1_seq1;Dir=indeterminatecoverage=97.5;identity=98.9;matches=923;mismatches=1;indels=9;unknowns=0;Target=comp155433_c1_seq1 926 3 .;CDS_Target=comp155433_c1_seq1 337 170 .;locus=RLOC_00002696
ChrX	stalkie_big_nohaplotig	exon	47104078	47105010	98	+	.	Parent=comp155433_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47104252	47104419	.	+	0	Parent=comp155433_c1_seq1.mrna1
ChrX	gffcl	locus	47121777	47125291	.	+	.	ID=RLOC_00002697;geneIDs=FBgn0028467.1.path1;transcripts=FBgn0028467.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47121777	47125291	.	+	.	ID=FBgn0028467.1.mrna1;geneID=FBgn0028467.1.path1;Name=FBgn0028467.1;Dir=sensecoverage=100.0;identity=100.0;matches=3140;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002697
ChrX	stalkie_big_nohaplotig	exon	47121777	47122659	99	+	.	Parent=FBgn0028467.1.mrna1;Target=FBgn0028467.1 1 883 +
ChrX	stalkie_big_nohaplotig	exon	47122721	47123109	100	+	.	Parent=FBgn0028467.1.mrna1;Target=FBgn0028467.1 884 1272 +
ChrX	stalkie_big_nohaplotig	exon	47123171	47124236	100	+	.	Parent=FBgn0028467.1.mrna1;Target=FBgn0028467.1 1273 2338 +
ChrX	stalkie_big_nohaplotig	exon	47124434	47124553	100	+	.	Parent=FBgn0028467.1.mrna1;Target=FBgn0028467.1 2339 2458 +
ChrX	stalkie_big_nohaplotig	exon	47124609	47125291	100	+	.	Parent=FBgn0028467.1.mrna1;Target=FBgn0028467.1 2459 3141 +
ChrX	stalkie_big_nohaplotig	CDS	47121777	47122659	.	+	0	Parent=FBgn0028467.1.mrna1;Target=FBgn0028467.1 1 883 +
ChrX	stalkie_big_nohaplotig	CDS	47122721	47123109	.	+	2	Parent=FBgn0028467.1.mrna1;Target=FBgn0028467.1 884 1272 +
ChrX	stalkie_big_nohaplotig	CDS	47123171	47124236	.	+	0	Parent=FBgn0028467.1.mrna1;Target=FBgn0028467.1 1273 2338 +
ChrX	stalkie_big_nohaplotig	CDS	47124434	47124553	.	+	2	Parent=FBgn0028467.1.mrna1;Target=FBgn0028467.1 2339 2458 +
ChrX	stalkie_big_nohaplotig	CDS	47124609	47125291	.	+	2	Parent=FBgn0028467.1.mrna1;Target=FBgn0028467.1 2459 3141 +
ChrX	gffcl	locus	47131035	47132187	.	+	.	ID=RLOC_00002698;geneIDs=FBgn0031877.1.path1;transcripts=FBgn0031877.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47131035	47132187	.	+	.	ID=FBgn0031877.1.mrna1;geneID=FBgn0031877.1.path1;Name=FBgn0031877.1;Dir=sensecoverage=100.0;identity=100.0;matches=1029;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002698
ChrX	stalkie_big_nohaplotig	exon	47131035	47131118	100	+	.	Parent=FBgn0031877.1.mrna1;Target=FBgn0031877.1 1 84 +
ChrX	stalkie_big_nohaplotig	exon	47131184	47131874	100	+	.	Parent=FBgn0031877.1.mrna1;Target=FBgn0031877.1 85 775 +
ChrX	stalkie_big_nohaplotig	exon	47131934	47132187	100	+	.	Parent=FBgn0031877.1.mrna1;Target=FBgn0031877.1 776 1029 +
ChrX	stalkie_big_nohaplotig	CDS	47131035	47131118	.	+	0	Parent=FBgn0031877.1.mrna1;Target=FBgn0031877.1 1 84 +
ChrX	stalkie_big_nohaplotig	CDS	47131184	47131874	.	+	0	Parent=FBgn0031877.1.mrna1;Target=FBgn0031877.1 85 775 +
ChrX	stalkie_big_nohaplotig	CDS	47131934	47132187	.	+	2	Parent=FBgn0031877.1.mrna1;Target=FBgn0031877.1 776 1029 +
ChrX	gffcl	locus	47141409	47142749	.	+	.	ID=RLOC_00002700;geneIDs=FBgn0016978.1.path1;transcripts=FBgn0016978.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47141409	47142749	.	+	.	ID=FBgn0016978.1.mrna1;geneID=FBgn0016978.1.path1;Name=FBgn0016978.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1341;mismatches=0;indels=0;unknowns=0;Target=FBgn0016978.1 1341 1 .;locus=RLOC_00002700
ChrX	stalkie_big_nohaplotig	exon	47141409	47142749	100	+	.	Parent=FBgn0016978.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47141409	47142749	.	+	0	Parent=FBgn0016978.1.mrna1
ChrX	gffcl	locus	47145409	47147005	.	+	.	ID=RLOC_00002701;geneIDs=comp161234_c0_seq1.path1;transcripts=comp161234_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47145409	47147005	.	+	.	ID=comp161234_c0_seq1.mrna1;geneID=comp161234_c0_seq1.path1;Name=comp161234_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1588;mismatches=8;indels=1;unknowns=0;Target=comp161234_c0_seq1 1596 1 .;CDS_Target=comp161234_c0_seq1 1456 1319 .;locus=RLOC_00002701
ChrX	stalkie_big_nohaplotig	exon	47145409	47147005	99	+	.	Parent=comp161234_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47146728	47146865	.	+	0	Parent=comp161234_c0_seq1.mrna1
ChrX	gffcl	locus	47147065	47149348	.	-	.	ID=RLOC_00002702;geneIDs=comp161667_c0_seq1.path1;transcripts=comp161667_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47147065	47149348	.	-	.	ID=comp161667_c0_seq1.mrna1;geneID=comp161667_c0_seq1.path1;Name=comp161667_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=2279;mismatches=5;indels=36;unknowns=0;Target=comp161667_c0_seq1 2320 1 .;CDS_Target=comp161667_c0_seq1 1751 1464 .;locus=RLOC_00002702
ChrX	stalkie_big_nohaplotig	exon	47147065	47149348	98	-	.	Parent=comp161667_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47147634	47147921	.	-	0	Parent=comp161667_c0_seq1.mrna1
ChrX	gffcl	locus	47150727	47151920	.	+	.	ID=RLOC_00002703;geneIDs=comp152205_c0_seq1.path1;transcripts=comp152205_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47150727	47151920	.	+	.	ID=comp152205_c0_seq1.mrna1;geneID=comp152205_c0_seq1.path1;Name=comp152205_c0_seq1;Dir=indeterminatecoverage=98.7;identity=96.3;matches=1193;mismatches=1;indels=45;unknowns=0;Target=comp152205_c0_seq1 1239 1 .;CDS_Target=comp152205_c0_seq1 533 438 .;locus=RLOC_00002703
ChrX	stalkie_big_nohaplotig	exon	47150727	47151920	96	+	.	Parent=comp152205_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47151164	47151259	.	+	0	Parent=comp152205_c0_seq1.mrna1
ChrX	gffcl	locus	47153100	47154272	.	-	.	ID=RLOC_00002704;geneIDs=FBgn0021944.1.path1;transcripts=FBgn0021944.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47153100	47154272	.	-	.	ID=FBgn0021944.1.mrna1;geneID=FBgn0021944.1.path1;Name=FBgn0021944.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1172;mismatches=1;indels=0;unknowns=0;Target=FBgn0021944.1 1173 1 .;locus=RLOC_00002704
ChrX	stalkie_big_nohaplotig	exon	47153100	47154272	99	-	.	Parent=FBgn0021944.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47153100	47154272	.	-	0	Parent=FBgn0021944.1.mrna1
ChrX	gffcl	locus	47172930	47174372	.	-	.	ID=RLOC_00002706;geneIDs=FBgn0028990.1.path1;transcripts=FBgn0028990.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47172930	47174372	.	-	.	ID=FBgn0028990.1.mrna1;geneID=FBgn0028990.1.path1;Name=FBgn0028990.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1443;mismatches=0;indels=0;unknowns=0;Target=FBgn0028990.1 1443 1 .;locus=RLOC_00002706
ChrX	stalkie_big_nohaplotig	exon	47172930	47174372	100	-	.	Parent=FBgn0028990.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47172930	47174372	.	-	0	Parent=FBgn0028990.1.mrna1
ChrX	gffcl	locus	47190925	47191332	.	-	.	ID=RLOC_00002707;geneIDs=comp157567_c0_seq1.path1;transcripts=comp157567_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47190925	47191332	.	-	.	ID=comp157567_c0_seq1.mrna1;geneID=comp157567_c0_seq1.path1;Name=comp157567_c0_seq1;Dir=indeterminatecoverage=34.5;identity=99.5;matches=406;mismatches=2;indels=0;unknowns=0;Target=comp157567_c0_seq1 1182 775 .;CDS_Target=comp157567_c0_seq1 1014 922 .;locus=RLOC_00002707
ChrX	stalkie_big_nohaplotig	exon	47190925	47191332	99	-	.	Parent=comp157567_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47191093	47191185	.	-	0	Parent=comp157567_c0_seq1.mrna1
ChrX	gffcl	locus	47196204	47209604	.	-	.	ID=RLOC_00002708;geneIDs=comp160212_c6_seq1.path1;transcripts=comp160212_c6_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47196204	47209604	.	-	.	ID=comp160212_c6_seq1.mrna1;geneID=comp160212_c6_seq1.path1;Name=comp160212_c6_seq1;Dir=indeterminatecoverage=75.3;identity=98.2;matches=1188;mismatches=13;indels=9;unknowns=0;Target=comp160212_c6_seq1 407 351 .;locus=RLOC_00002708
ChrX	stalkie_big_nohaplotig	exon	47196204	47197322	98	-	.	Parent=comp160212_c6_seq1.mrna1;Target=comp160212_c6_seq1 1454 329 .
ChrX	stalkie_big_nohaplotig	exon	47209524	47209604	87	-	.	Parent=comp160212_c6_seq1.mrna1;Target=comp160212_c6_seq1 312 230 .
ChrX	stalkie_big_nohaplotig	CDS	47197247	47197300	.	-	0	Parent=comp160212_c6_seq1.mrna1
ChrX	gffcl	locus	47201810	47202496	.	-	.	ID=RLOC_00002709;geneIDs=comp152471_c0_seq1.path1;transcripts=comp152471_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47201810	47202496	.	-	.	ID=comp152471_c0_seq1.mrna1;geneID=comp152471_c0_seq1.path1;Name=comp152471_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=679;mismatches=8;indels=0;unknowns=0;Target=comp152471_c0_seq1 687 1 .;CDS_Target=comp152471_c0_seq1 266 81 .;locus=RLOC_00002709
ChrX	stalkie_big_nohaplotig	exon	47201810	47202496	98	-	.	Parent=comp152471_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47202231	47202416	.	-	0	Parent=comp152471_c0_seq1.mrna1
ChrX	gffcl	locus	47203671	47204342	.	-	.	ID=RLOC_00002710;geneIDs=comp90487_c0_seq1.path1;transcripts=comp90487_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47203671	47204342	.	-	.	ID=comp90487_c0_seq1.mrna1;geneID=comp90487_c0_seq1.path1;Name=comp90487_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=666;mismatches=6;indels=0;unknowns=0;Target=comp90487_c0_seq1 672 1 .;CDS_Target=comp90487_c0_seq1 672 610 .;locus=RLOC_00002710
ChrX	stalkie_big_nohaplotig	exon	47203671	47204342	99	-	.	Parent=comp90487_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47203671	47203733	.	-	0	Parent=comp90487_c0_seq1.mrna1
ChrX	gffcl	locus	47206156	47227883	.	-	.	ID=RLOC_00002711;geneIDs=FBgn0028703.1.path1,comp147068_c0_seq1.path1;transcripts=FBgn0028703.1.mrna1,comp147068_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47206156	47227883	.	-	.	ID=FBgn0028703.1.mrna1;geneID=FBgn0028703.1.path1;Name=FBgn0028703.1;Dir=sensecoverage=100.0;identity=99.9;matches=2377;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002711
ChrX	stalkie_big_nohaplotig	exon	47206156	47206377	99	-	.	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 2158 2379 +
ChrX	stalkie_big_nohaplotig	exon	47207768	47207876	100	-	.	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 2049 2157 +
ChrX	stalkie_big_nohaplotig	exon	47207937	47208106	100	-	.	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 1879 2048 +
ChrX	stalkie_big_nohaplotig	exon	47210651	47210683	100	-	.	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 1846 1878 +
ChrX	stalkie_big_nohaplotig	exon	47212431	47212482	100	-	.	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 1794 1845 +
ChrX	stalkie_big_nohaplotig	exon	47212538	47212691	100	-	.	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 1640 1793 +
ChrX	stalkie_big_nohaplotig	exon	47213782	47213893	100	-	.	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 1528 1639 +
ChrX	stalkie_big_nohaplotig	exon	47213957	47214265	100	-	.	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 1219 1527 +
ChrX	stalkie_big_nohaplotig	exon	47215204	47215345	100	-	.	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 1077 1218 +
ChrX	stalkie_big_nohaplotig	exon	47215429	47215718	100	-	.	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 787 1076 +
ChrX	stalkie_big_nohaplotig	exon	47215788	47215982	100	-	.	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 592 786 +
ChrX	stalkie_big_nohaplotig	exon	47216043	47216167	100	-	.	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 467 591 +
ChrX	stalkie_big_nohaplotig	exon	47227418	47227883	99	-	.	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 1 466 +
ChrX	stalkie_big_nohaplotig	CDS	47206156	47206377	.	-	0	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 2158 2379 +
ChrX	stalkie_big_nohaplotig	CDS	47207768	47207876	.	-	1	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 2049 2157 +
ChrX	stalkie_big_nohaplotig	CDS	47207937	47208106	.	-	0	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 1879 2048 +
ChrX	stalkie_big_nohaplotig	CDS	47210651	47210683	.	-	0	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 1846 1878 +
ChrX	stalkie_big_nohaplotig	CDS	47212431	47212482	.	-	1	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 1794 1845 +
ChrX	stalkie_big_nohaplotig	CDS	47212538	47212691	.	-	2	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 1640 1793 +
ChrX	stalkie_big_nohaplotig	CDS	47213782	47213893	.	-	0	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 1528 1639 +
ChrX	stalkie_big_nohaplotig	CDS	47213957	47214265	.	-	0	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 1219 1527 +
ChrX	stalkie_big_nohaplotig	CDS	47215204	47215345	.	-	1	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 1077 1218 +
ChrX	stalkie_big_nohaplotig	CDS	47215429	47215718	.	-	0	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 787 1076 +
ChrX	stalkie_big_nohaplotig	CDS	47215788	47215982	.	-	0	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 592 786 +
ChrX	stalkie_big_nohaplotig	CDS	47216043	47216167	.	-	2	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 467 591 +
ChrX	stalkie_big_nohaplotig	CDS	47227418	47227883	.	-	0	Parent=FBgn0028703.1.mrna1;Target=FBgn0028703.1 1 466 +
ChrX	stalkie_big_nohaplotig	mRNA	47218427	47227441	.	-	.	ID=comp147068_c0_seq1.mrna1;geneID=comp147068_c0_seq1.path1;Name=comp147068_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=406;mismatches=0;indels=0;unknowns=0;Target=comp147068_c0_seq1 71 226 .;locus=RLOC_00002711
ChrX	stalkie_big_nohaplotig	exon	47218427	47218808	100	-	.	Parent=comp147068_c0_seq1.mrna1;Target=comp147068_c0_seq1 1 382 -
ChrX	stalkie_big_nohaplotig	exon	47227418	47227441	100	-	.	Parent=comp147068_c0_seq1.mrna1;Target=comp147068_c0_seq1 383 406 -
ChrX	stalkie_big_nohaplotig	CDS	47218497	47218652	.	-	0	Parent=comp147068_c0_seq1.mrna1
ChrX	gffcl	locus	47206359	48862459	.	+	.	ID=RLOC_00002712;geneIDs=comp158629_c0_seq1.path1;transcripts=comp158629_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47206359	48862459	.	+	.	ID=comp158629_c0_seq1.mrna1;geneID=comp158629_c0_seq1.path1;Name=comp158629_c0_seq1;Dir=indeterminatecoverage=73.4;identity=91.2;matches=763;mismatches=27;indels=47;unknowns=0;Target=comp158629_c0_seq1 310 278 .;locus=RLOC_00002712
ChrX	stalkie_big_nohaplotig	exon	47206359	47207135	92	+	.	Parent=comp158629_c0_seq1.mrna1;Target=comp158629_c0_seq1 775 1 .
ChrX	stalkie_big_nohaplotig	exon	48828060	48828066	100	+	.	Parent=comp158629_c0_seq1.mrna1;Target=comp158629_c0_seq1 782 776 .
ChrX	stalkie_big_nohaplotig	exon	48832921	48832924	100	+	.	Parent=comp158629_c0_seq1.mrna1;Target=comp158629_c0_seq1 786 783 .
ChrX	stalkie_big_nohaplotig	exon	48862429	48862459	58	+	.	Parent=comp158629_c0_seq1.mrna1;Target=comp158629_c0_seq1 808 787 .
ChrX	stalkie_big_nohaplotig	CDS	47206656	47206688	.	+	0	Parent=comp158629_c0_seq1.mrna1
ChrX	gffcl	locus	47230638	47231675	.	+	.	ID=RLOC_00002713;geneIDs=FBgn0031871.1.path1;transcripts=FBgn0031871.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47230638	47231675	.	+	.	ID=FBgn0031871.1.mrna1;geneID=FBgn0031871.1.path1;Name=FBgn0031871.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1038;mismatches=0;indels=0;unknowns=0;Target=FBgn0031871.1 1038 1 .;locus=RLOC_00002713
ChrX	stalkie_big_nohaplotig	exon	47230638	47231675	100	+	.	Parent=FBgn0031871.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47230638	47231675	.	+	0	Parent=FBgn0031871.1.mrna1
ChrX	gffcl	locus	47234230	47234568	.	-	.	ID=RLOC_00002714;geneIDs=comp151205_c0_seq2.path1;transcripts=comp151205_c0_seq2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47234230	47234568	.	-	.	ID=comp151205_c0_seq2.mrna1;geneID=comp151205_c0_seq2.path1;Name=comp151205_c0_seq2;Dir=antisensecoverage=92.6;identity=97.8;matches=271;mismatches=4;indels=2;unknowns=0;Target=comp151205_c0_seq2 187 297 .;locus=RLOC_00002714
ChrX	stalkie_big_nohaplotig	exon	47234230	47234314	95	-	.	Parent=comp151205_c0_seq2.mrna1;Target=comp151205_c0_seq2 23 109 -
ChrX	stalkie_big_nohaplotig	exon	47234379	47234568	98	-	.	Parent=comp151205_c0_seq2.mrna1;Target=comp151205_c0_seq2 110 299 -
ChrX	stalkie_big_nohaplotig	CDS	47234456	47234566	.	-	0	Parent=comp151205_c0_seq2.mrna1
ChrX	gffcl	locus	47240215	47265742	.	-	.	ID=RLOC_00002715;geneIDs=FBgn0031869.1.path1,comp113693_c0_seq1.path1,comp138349_c0_seq1.path1,comp159196_c2_seq1.path1;transcripts=comp159196_c2_seq1.mrna1,FBgn0031869.1.mrna1,comp138349_c0_seq1.mrna1,comp113693_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47240215	47265742	.	-	.	ID=comp159196_c2_seq1.mrna1;geneID=comp159196_c2_seq1.path1;Name=comp159196_c2_seq1;Dir=sensecoverage=95.6;identity=99.9;matches=7090;mismatches=1;indels=5;unknowns=0;locus=RLOC_00002715
ChrX	stalkie_big_nohaplotig	exon	47240215	47240525	100	-	.	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 6785 7095 +
ChrX	stalkie_big_nohaplotig	exon	47240582	47240824	99	-	.	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 6541 6784 +
ChrX	stalkie_big_nohaplotig	exon	47240887	47242107	99	-	.	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 5318 6540 +
ChrX	stalkie_big_nohaplotig	exon	47242161	47242434	100	-	.	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 5044 5317 +
ChrX	stalkie_big_nohaplotig	exon	47242762	47243534	100	-	.	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 4271 5043 +
ChrX	stalkie_big_nohaplotig	exon	47243591	47243730	100	-	.	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 4131 4270 +
ChrX	stalkie_big_nohaplotig	exon	47244817	47245560	100	-	.	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 3387 4130 +
ChrX	stalkie_big_nohaplotig	exon	47248963	47249053	100	-	.	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 3296 3386 +
ChrX	stalkie_big_nohaplotig	exon	47252209	47252421	100	-	.	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 3083 3295 +
ChrX	stalkie_big_nohaplotig	exon	47254230	47255334	100	-	.	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 1978 3082 +
ChrX	stalkie_big_nohaplotig	exon	47255406	47255623	100	-	.	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 1760 1977 +
ChrX	stalkie_big_nohaplotig	exon	47255684	47255883	100	-	.	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 1560 1759 +
ChrX	stalkie_big_nohaplotig	exon	47258138	47258211	100	-	.	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 1486 1559 +
ChrX	stalkie_big_nohaplotig	exon	47258267	47258494	100	-	.	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 1258 1485 +
ChrX	stalkie_big_nohaplotig	exon	47264486	47265742	99	-	.	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 1 1257 +
ChrX	stalkie_big_nohaplotig	CDS	47241659	47242107	.	-	0	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 5318 5767 +
ChrX	stalkie_big_nohaplotig	CDS	47242161	47242434	.	-	1	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 5044 5317 +
ChrX	stalkie_big_nohaplotig	CDS	47242762	47243534	.	-	0	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 4271 5043 +
ChrX	stalkie_big_nohaplotig	CDS	47243591	47243730	.	-	2	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 4131 4270 +
ChrX	stalkie_big_nohaplotig	CDS	47244817	47245560	.	-	2	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 3387 4130 +
ChrX	stalkie_big_nohaplotig	CDS	47248963	47249053	.	-	0	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 3296 3386 +
ChrX	stalkie_big_nohaplotig	CDS	47252209	47252421	.	-	0	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 3083 3295 +
ChrX	stalkie_big_nohaplotig	CDS	47254230	47255334	.	-	1	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 1978 3082 +
ChrX	stalkie_big_nohaplotig	CDS	47255406	47255623	.	-	0	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 1760 1977 +
ChrX	stalkie_big_nohaplotig	CDS	47255684	47255883	.	-	2	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 1560 1759 +
ChrX	stalkie_big_nohaplotig	CDS	47258138	47258211	.	-	1	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 1486 1559 +
ChrX	stalkie_big_nohaplotig	CDS	47258267	47258448	.	-	0	Parent=comp159196_c2_seq1.mrna1;Target=comp159196_c2_seq1 1304 1485 +
ChrX	stalkie_big_nohaplotig	mRNA	47241662	47258463	.	-	.	ID=FBgn0031869.1.mrna1;geneID=FBgn0031869.1.path1;Name=FBgn0031869.1;Dir=sensecoverage=100.0;identity=100.0;matches=4457;mismatches=0;indels=1;unknowns=0;locus=RLOC_00002715
ChrX	stalkie_big_nohaplotig	exon	47241662	47242107	99	-	.	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 4012 4458 +
ChrX	stalkie_big_nohaplotig	exon	47242161	47242434	100	-	.	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 3738 4011 +
ChrX	stalkie_big_nohaplotig	exon	47242762	47243534	100	-	.	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 2965 3737 +
ChrX	stalkie_big_nohaplotig	exon	47243591	47243730	100	-	.	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 2825 2964 +
ChrX	stalkie_big_nohaplotig	exon	47244817	47245560	100	-	.	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 2081 2824 +
ChrX	stalkie_big_nohaplotig	exon	47248963	47249053	100	-	.	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 1990 2080 +
ChrX	stalkie_big_nohaplotig	exon	47252209	47252421	100	-	.	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 1777 1989 +
ChrX	stalkie_big_nohaplotig	exon	47254230	47255334	100	-	.	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 672 1776 +
ChrX	stalkie_big_nohaplotig	exon	47255406	47255623	100	-	.	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 454 671 +
ChrX	stalkie_big_nohaplotig	exon	47255684	47255865	100	-	.	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 272 453 +
ChrX	stalkie_big_nohaplotig	exon	47258138	47258211	100	-	.	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 198 271 +
ChrX	stalkie_big_nohaplotig	exon	47258267	47258463	100	-	.	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 1 197 +
ChrX	stalkie_big_nohaplotig	CDS	47241662	47242107	.	-	0	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 4012 4458 +
ChrX	stalkie_big_nohaplotig	CDS	47242161	47242434	.	-	1	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 3738 4011 +
ChrX	stalkie_big_nohaplotig	CDS	47242762	47243534	.	-	0	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 2965 3737 +
ChrX	stalkie_big_nohaplotig	CDS	47243591	47243730	.	-	2	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 2825 2964 +
ChrX	stalkie_big_nohaplotig	CDS	47244817	47245560	.	-	2	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 2081 2824 +
ChrX	stalkie_big_nohaplotig	CDS	47248963	47249053	.	-	0	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 1990 2080 +
ChrX	stalkie_big_nohaplotig	CDS	47252209	47252421	.	-	0	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 1777 1989 +
ChrX	stalkie_big_nohaplotig	CDS	47254230	47255334	.	-	1	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 672 1776 +
ChrX	stalkie_big_nohaplotig	CDS	47255406	47255623	.	-	0	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 454 671 +
ChrX	stalkie_big_nohaplotig	CDS	47255684	47255865	.	-	2	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 272 453 +
ChrX	stalkie_big_nohaplotig	CDS	47258138	47258211	.	-	1	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 198 271 +
ChrX	stalkie_big_nohaplotig	CDS	47258267	47258463	.	-	0	Parent=FBgn0031869.1.mrna1;Target=FBgn0031869.1 1 197 +
ChrX	stalkie_big_nohaplotig	mRNA	47243712	47244531	.	-	.	ID=comp138349_c0_seq1.mrna1;geneID=comp138349_c0_seq1.path1;Name=comp138349_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.8;matches=813;mismatches=7;indels=29;unknowns=0;Target=comp138349_c0_seq1 849 1 .;CDS_Target=comp138349_c0_seq1 759 607 .;locus=RLOC_00002715
ChrX	stalkie_big_nohaplotig	exon	47243712	47244531	95	-	.	Parent=comp138349_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47243802	47243954	.	-	0	Parent=comp138349_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47245539	47252232	.	-	.	ID=comp113693_c0_seq1.mrna1;geneID=comp113693_c0_seq1.path1;Name=comp113693_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=521;mismatches=0;indels=1;unknowns=0;locus=RLOC_00002715
ChrX	stalkie_big_nohaplotig	exon	47245539	47245560	100	-	.	Parent=comp113693_c0_seq1.mrna1;Target=comp113693_c0_seq1 1 22 -
ChrX	stalkie_big_nohaplotig	exon	47251675	47252149	99	-	.	Parent=comp113693_c0_seq1.mrna1;Target=comp113693_c0_seq1 23 498 -
ChrX	stalkie_big_nohaplotig	exon	47252209	47252232	100	-	.	Parent=comp113693_c0_seq1.mrna1;Target=comp113693_c0_seq1 499 522 -
ChrX	stalkie_big_nohaplotig	CDS	47251704	47252149	.	-	0	Parent=comp113693_c0_seq1.mrna1;Target=comp113693_c0_seq1 52 498 .
ChrX	stalkie_big_nohaplotig	CDS	47252209	47252232	.	-	0	Parent=comp113693_c0_seq1.mrna1;Target=comp113693_c0_seq1 499 522 .
ChrX	gffcl	locus	47245853	47246283	.	-	.	ID=RLOC_00002716;geneIDs=comp150056_c0_seq1.path1;transcripts=comp150056_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47245853	47246283	.	-	.	ID=comp150056_c0_seq1.mrna1;geneID=comp150056_c0_seq1.path1;Name=comp150056_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=430;mismatches=1;indels=0;unknowns=0;Target=comp150056_c0_seq1 431 1 .;CDS_Target=comp150056_c0_seq1 430 278 .;locus=RLOC_00002716
ChrX	stalkie_big_nohaplotig	exon	47245853	47246283	99	-	.	Parent=comp150056_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47245854	47246006	.	-	0	Parent=comp150056_c0_seq1.mrna1
ChrX	gffcl	locus	47246605	47247522	.	.	.	ID=RLOC_00002717;geneIDs=comp73406_c0_seq1.path1,comp117587_c0_seq1.path1;transcripts=comp117587_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47247038	47247522	.	+	.	ID=comp117587_c0_seq1.mrna1;geneID=comp117587_c0_seq1.path1;Name=comp117587_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=482;mismatches=3;indels=0;unknowns=0;Target=comp117587_c0_seq1 485 1 .;CDS_Target=comp117587_c0_seq1 484 383 .;locus=RLOC_00002717
ChrX	stalkie_big_nohaplotig	exon	47247038	47247522	99	+	.	Parent=comp117587_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47247420	47247521	.	+	0	Parent=comp117587_c0_seq1.mrna1
ChrX	gffcl	locus	47256941	47257968	.	+	.	ID=RLOC_00002718;geneIDs=comp150120_c0_seq1.path1;transcripts=comp150120_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47256941	47257968	.	+	.	ID=comp150120_c0_seq1.mrna1;geneID=comp150120_c0_seq1.path1;Name=comp150120_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1028;mismatches=0;indels=0;unknowns=0;Target=comp150120_c0_seq1 1028 1 .;CDS_Target=comp150120_c0_seq1 1027 920 .;locus=RLOC_00002718
ChrX	stalkie_big_nohaplotig	exon	47256941	47257968	100	+	.	Parent=comp150120_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47257860	47257967	.	+	0	Parent=comp150120_c0_seq1.mrna1
ChrX	gffcl	locus	47272035	47277707	.	+	.	ID=RLOC_00002719;geneIDs=FBgn0027490.1.path1;transcripts=FBgn0027490.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47272035	47277707	.	+	.	ID=FBgn0027490.1.mrna1;geneID=FBgn0027490.1.path1;Name=FBgn0027490.1;Dir=sensecoverage=100.0;identity=100.0;matches=3818;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002719
ChrX	stalkie_big_nohaplotig	exon	47272035	47272964	99	+	.	Parent=FBgn0027490.1.mrna1;Target=FBgn0027490.1 1 930 +
ChrX	stalkie_big_nohaplotig	exon	47273019	47274249	100	+	.	Parent=FBgn0027490.1.mrna1;Target=FBgn0027490.1 931 2161 +
ChrX	stalkie_big_nohaplotig	exon	47276050	47277707	100	+	.	Parent=FBgn0027490.1.mrna1;Target=FBgn0027490.1 2162 3819 +
ChrX	stalkie_big_nohaplotig	CDS	47272035	47272964	.	+	0	Parent=FBgn0027490.1.mrna1;Target=FBgn0027490.1 1 930 +
ChrX	stalkie_big_nohaplotig	CDS	47273019	47274249	.	+	0	Parent=FBgn0027490.1.mrna1;Target=FBgn0027490.1 931 2161 +
ChrX	stalkie_big_nohaplotig	CDS	47276050	47277707	.	+	2	Parent=FBgn0027490.1.mrna1;Target=FBgn0027490.1 2162 3819 +
ChrX	gffcl	locus	47283689	47284628	.	+	.	ID=RLOC_00002720;geneIDs=comp144783_c0_seq1.path1;transcripts=comp144783_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47283689	47284628	.	+	.	ID=comp144783_c0_seq1.mrna1;geneID=comp144783_c0_seq1.path1;Name=comp144783_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.2;matches=934;mismatches=3;indels=5;unknowns=0;Target=comp144783_c0_seq1 955 17 .;CDS_Target=comp144783_c0_seq1 116 18 .;locus=RLOC_00002720
ChrX	stalkie_big_nohaplotig	exon	47283689	47284628	99	+	.	Parent=comp144783_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47283690	47283788	.	+	0	Parent=comp144783_c0_seq1.mrna1
ChrX	gffcl	locus	47285446	47327263	.	-	.	ID=RLOC_00002721;geneIDs=FBgn0032120.1.path1;transcripts=FBgn0032120.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47285446	47327263	.	-	.	ID=FBgn0032120.1.mrna1;geneID=FBgn0032120.1.path1;Name=FBgn0032120.1;Dir=sensecoverage=100.0;identity=100.0;matches=4557;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002721
ChrX	stalkie_big_nohaplotig	exon	47285446	47285491	100	-	.	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 4512 4557 +
ChrX	stalkie_big_nohaplotig	exon	47286626	47286766	100	-	.	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 4371 4511 +
ChrX	stalkie_big_nohaplotig	exon	47286924	47287111	100	-	.	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 4183 4370 +
ChrX	stalkie_big_nohaplotig	exon	47287169	47287369	100	-	.	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 3982 4182 +
ChrX	stalkie_big_nohaplotig	exon	47287542	47287727	100	-	.	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 3796 3981 +
ChrX	stalkie_big_nohaplotig	exon	47287801	47287971	100	-	.	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 3625 3795 +
ChrX	stalkie_big_nohaplotig	exon	47289370	47289538	100	-	.	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 3456 3624 +
ChrX	stalkie_big_nohaplotig	exon	47289606	47289764	100	-	.	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 3297 3455 +
ChrX	stalkie_big_nohaplotig	exon	47289853	47290225	100	-	.	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 2924 3296 +
ChrX	stalkie_big_nohaplotig	exon	47290324	47290646	100	-	.	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 2601 2923 +
ChrX	stalkie_big_nohaplotig	exon	47290747	47291101	100	-	.	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 2246 2600 +
ChrX	stalkie_big_nohaplotig	exon	47291192	47291874	100	-	.	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 1563 2245 +
ChrX	stalkie_big_nohaplotig	exon	47291944	47292068	100	-	.	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 1438 1562 +
ChrX	stalkie_big_nohaplotig	exon	47293258	47293437	100	-	.	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 1258 1437 +
ChrX	stalkie_big_nohaplotig	exon	47293534	47293714	100	-	.	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 1077 1257 +
ChrX	stalkie_big_nohaplotig	exon	47326188	47327263	100	-	.	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 1 1076 +
ChrX	stalkie_big_nohaplotig	CDS	47285446	47285491	.	-	1	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 4512 4557 +
ChrX	stalkie_big_nohaplotig	CDS	47286626	47286766	.	-	1	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 4371 4511 +
ChrX	stalkie_big_nohaplotig	CDS	47286924	47287111	.	-	0	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 4183 4370 +
ChrX	stalkie_big_nohaplotig	CDS	47287169	47287369	.	-	0	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 3982 4182 +
ChrX	stalkie_big_nohaplotig	CDS	47287542	47287727	.	-	0	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 3796 3981 +
ChrX	stalkie_big_nohaplotig	CDS	47287801	47287971	.	-	0	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 3625 3795 +
ChrX	stalkie_big_nohaplotig	CDS	47289370	47289538	.	-	1	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 3456 3624 +
ChrX	stalkie_big_nohaplotig	CDS	47289606	47289764	.	-	1	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 3297 3455 +
ChrX	stalkie_big_nohaplotig	CDS	47289853	47290225	.	-	2	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 2924 3296 +
ChrX	stalkie_big_nohaplotig	CDS	47290324	47290646	.	-	1	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 2601 2923 +
ChrX	stalkie_big_nohaplotig	CDS	47290747	47291101	.	-	2	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 2246 2600 +
ChrX	stalkie_big_nohaplotig	CDS	47291192	47291874	.	-	1	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 1563 2245 +
ChrX	stalkie_big_nohaplotig	CDS	47291944	47292068	.	-	0	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 1438 1562 +
ChrX	stalkie_big_nohaplotig	CDS	47293258	47293437	.	-	0	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 1258 1437 +
ChrX	stalkie_big_nohaplotig	CDS	47293534	47293714	.	-	1	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 1077 1257 +
ChrX	stalkie_big_nohaplotig	CDS	47326188	47327263	.	-	0	Parent=FBgn0032120.1.mrna1;Target=FBgn0032120.1 1 1076 +
ChrX	gffcl	locus	47354318	47362652	.	+	.	ID=RLOC_00002722;geneIDs=FBgn0004868.1.path1;transcripts=FBgn0004868.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47354318	47362652	.	+	.	ID=FBgn0004868.1.mrna1;geneID=FBgn0004868.1.path1;Name=FBgn0004868.1;Dir=sensecoverage=100.0;identity=100.0;matches=1335;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002722
ChrX	stalkie_big_nohaplotig	exon	47354318	47354717	100	+	.	Parent=FBgn0004868.1.mrna1;Target=FBgn0004868.1 1 400 +
ChrX	stalkie_big_nohaplotig	exon	47361629	47362104	100	+	.	Parent=FBgn0004868.1.mrna1;Target=FBgn0004868.1 401 876 +
ChrX	stalkie_big_nohaplotig	exon	47362194	47362652	100	+	.	Parent=FBgn0004868.1.mrna1;Target=FBgn0004868.1 877 1335 +
ChrX	stalkie_big_nohaplotig	CDS	47354318	47354717	.	+	0	Parent=FBgn0004868.1.mrna1;Target=FBgn0004868.1 1 400 +
ChrX	stalkie_big_nohaplotig	CDS	47361629	47362104	.	+	2	Parent=FBgn0004868.1.mrna1;Target=FBgn0004868.1 401 876 +
ChrX	stalkie_big_nohaplotig	CDS	47362194	47362652	.	+	0	Parent=FBgn0004868.1.mrna1;Target=FBgn0004868.1 877 1335 +
ChrX	gffcl	locus	47366344	47367617	.	-	.	ID=RLOC_00002723;geneIDs=FBgn0000477.1.path1;transcripts=FBgn0000477.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47366344	47367617	.	-	.	ID=FBgn0000477.1.mrna1;geneID=FBgn0000477.1.path1;Name=FBgn0000477.1;Dir=sensecoverage=100.0;identity=99.5;matches=1143;mismatches=6;indels=0;unknowns=0;locus=RLOC_00002723
ChrX	stalkie_big_nohaplotig	exon	47366344	47366605	99	-	.	Parent=FBgn0000477.1.mrna1;Target=FBgn0000477.1 888 1149 +
ChrX	stalkie_big_nohaplotig	exon	47366672	47367379	99	-	.	Parent=FBgn0000477.1.mrna1;Target=FBgn0000477.1 180 887 +
ChrX	stalkie_big_nohaplotig	exon	47367439	47367617	99	-	.	Parent=FBgn0000477.1.mrna1;Target=FBgn0000477.1 1 179 +
ChrX	stalkie_big_nohaplotig	CDS	47366344	47366605	.	-	1	Parent=FBgn0000477.1.mrna1;Target=FBgn0000477.1 888 1149 +
ChrX	stalkie_big_nohaplotig	CDS	47366672	47367379	.	-	1	Parent=FBgn0000477.1.mrna1;Target=FBgn0000477.1 180 887 +
ChrX	stalkie_big_nohaplotig	CDS	47367439	47367617	.	-	0	Parent=FBgn0000477.1.mrna1;Target=FBgn0000477.1 1 179 +
ChrX	gffcl	locus	47368842	47369175	.	-	.	ID=RLOC_00002724;geneIDs=comp150533_c0_seq1.path1;transcripts=comp150533_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47368842	47369175	.	-	.	ID=comp150533_c0_seq1.mrna1;geneID=comp150533_c0_seq1.path1;Name=comp150533_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=334;mismatches=0;indels=0;unknowns=0;Target=comp150533_c0_seq1 334 1 .;CDS_Target=comp150533_c0_seq1 220 2 .;locus=RLOC_00002724
ChrX	stalkie_big_nohaplotig	exon	47368842	47369175	100	-	.	Parent=comp150533_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47368956	47369174	.	-	0	Parent=comp150533_c0_seq1.mrna1
ChrX	gffcl	locus	47371073	47372476	.	-	.	ID=RLOC_00002725;geneIDs=FBgn0028919.1.path1;transcripts=FBgn0028919.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47371073	47372476	.	-	.	ID=FBgn0028919.1.mrna1;geneID=FBgn0028919.1.path1;Name=FBgn0028919.1;Dir=sensecoverage=100.0;identity=99.8;matches=656;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002725
ChrX	stalkie_big_nohaplotig	exon	47371073	47371201	99	-	.	Parent=FBgn0028919.1.mrna1;Target=FBgn0028919.1 529 657 +
ChrX	stalkie_big_nohaplotig	exon	47371271	47371525	100	-	.	Parent=FBgn0028919.1.mrna1;Target=FBgn0028919.1 274 528 +
ChrX	stalkie_big_nohaplotig	exon	47371584	47371732	100	-	.	Parent=FBgn0028919.1.mrna1;Target=FBgn0028919.1 125 273 +
ChrX	stalkie_big_nohaplotig	exon	47372353	47372476	100	-	.	Parent=FBgn0028919.1.mrna1;Target=FBgn0028919.1 1 124 +
ChrX	stalkie_big_nohaplotig	CDS	47371073	47371201	.	-	0	Parent=FBgn0028919.1.mrna1;Target=FBgn0028919.1 529 657 +
ChrX	stalkie_big_nohaplotig	CDS	47371271	47371525	.	-	0	Parent=FBgn0028919.1.mrna1;Target=FBgn0028919.1 274 528 +
ChrX	stalkie_big_nohaplotig	CDS	47371584	47371732	.	-	2	Parent=FBgn0028919.1.mrna1;Target=FBgn0028919.1 125 273 +
ChrX	stalkie_big_nohaplotig	CDS	47372353	47372476	.	-	0	Parent=FBgn0028919.1.mrna1;Target=FBgn0028919.1 1 124 +
ChrX	gffcl	locus	47376102	47388925	.	-	.	ID=RLOC_00002726;geneIDs=FBgn0028539.1.path1;transcripts=FBgn0028539.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47376102	47388925	.	-	.	ID=FBgn0028539.1.mrna1;geneID=FBgn0028539.1.path1;Name=FBgn0028539.1;Dir=sensecoverage=100.0;identity=100.0;matches=4715;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002726
ChrX	stalkie_big_nohaplotig	exon	47376102	47376519	100	-	.	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 4299 4716 +
ChrX	stalkie_big_nohaplotig	exon	47376708	47376838	100	-	.	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 4168 4298 +
ChrX	stalkie_big_nohaplotig	exon	47376891	47377354	99	-	.	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 3704 4167 +
ChrX	stalkie_big_nohaplotig	exon	47378422	47378587	100	-	.	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 3538 3703 +
ChrX	stalkie_big_nohaplotig	exon	47378647	47379197	100	-	.	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 2987 3537 +
ChrX	stalkie_big_nohaplotig	exon	47379261	47379319	100	-	.	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 2928 2986 +
ChrX	stalkie_big_nohaplotig	exon	47379381	47379603	100	-	.	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 2705 2927 +
ChrX	stalkie_big_nohaplotig	exon	47379662	47379899	100	-	.	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 2467 2704 +
ChrX	stalkie_big_nohaplotig	exon	47381652	47381832	100	-	.	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 2286 2466 +
ChrX	stalkie_big_nohaplotig	exon	47381894	47382045	100	-	.	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 2134 2285 +
ChrX	stalkie_big_nohaplotig	exon	47382112	47382424	100	-	.	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 1821 2133 +
ChrX	stalkie_big_nohaplotig	exon	47382490	47382644	100	-	.	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 1666 1820 +
ChrX	stalkie_big_nohaplotig	exon	47382712	47382857	100	-	.	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 1520 1665 +
ChrX	stalkie_big_nohaplotig	exon	47384470	47384686	100	-	.	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 1303 1519 +
ChrX	stalkie_big_nohaplotig	exon	47384743	47384921	100	-	.	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 1124 1302 +
ChrX	stalkie_big_nohaplotig	exon	47384988	47385131	100	-	.	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 980 1123 +
ChrX	stalkie_big_nohaplotig	exon	47385208	47385430	100	-	.	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 757 979 +
ChrX	stalkie_big_nohaplotig	exon	47387125	47387378	100	-	.	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 503 756 +
ChrX	stalkie_big_nohaplotig	exon	47388261	47388458	100	-	.	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 305 502 +
ChrX	stalkie_big_nohaplotig	exon	47388518	47388641	100	-	.	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 181 304 +
ChrX	stalkie_big_nohaplotig	exon	47388746	47388925	100	-	.	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 1 180 +
ChrX	stalkie_big_nohaplotig	CDS	47376102	47376519	.	-	1	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 4299 4716 +
ChrX	stalkie_big_nohaplotig	CDS	47376708	47376838	.	-	0	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 4168 4298 +
ChrX	stalkie_big_nohaplotig	CDS	47376891	47377354	.	-	2	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 3704 4167 +
ChrX	stalkie_big_nohaplotig	CDS	47378422	47378587	.	-	0	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 3538 3703 +
ChrX	stalkie_big_nohaplotig	CDS	47378647	47379197	.	-	2	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 2987 3537 +
ChrX	stalkie_big_nohaplotig	CDS	47379261	47379319	.	-	1	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 2928 2986 +
ChrX	stalkie_big_nohaplotig	CDS	47379381	47379603	.	-	2	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 2705 2927 +
ChrX	stalkie_big_nohaplotig	CDS	47379662	47379899	.	-	0	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 2467 2704 +
ChrX	stalkie_big_nohaplotig	CDS	47381652	47381832	.	-	1	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 2286 2466 +
ChrX	stalkie_big_nohaplotig	CDS	47381894	47382045	.	-	0	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 2134 2285 +
ChrX	stalkie_big_nohaplotig	CDS	47382112	47382424	.	-	1	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 1821 2133 +
ChrX	stalkie_big_nohaplotig	CDS	47382490	47382644	.	-	0	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 1666 1820 +
ChrX	stalkie_big_nohaplotig	CDS	47382712	47382857	.	-	2	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 1520 1665 +
ChrX	stalkie_big_nohaplotig	CDS	47384470	47384686	.	-	0	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 1303 1519 +
ChrX	stalkie_big_nohaplotig	CDS	47384743	47384921	.	-	2	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 1124 1302 +
ChrX	stalkie_big_nohaplotig	CDS	47384988	47385131	.	-	2	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 980 1123 +
ChrX	stalkie_big_nohaplotig	CDS	47385208	47385430	.	-	0	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 757 979 +
ChrX	stalkie_big_nohaplotig	CDS	47387125	47387378	.	-	2	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 503 756 +
ChrX	stalkie_big_nohaplotig	CDS	47388261	47388458	.	-	2	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 305 502 +
ChrX	stalkie_big_nohaplotig	CDS	47388518	47388641	.	-	0	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 181 304 +
ChrX	stalkie_big_nohaplotig	CDS	47388746	47388925	.	-	0	Parent=FBgn0028539.1.mrna1;Target=FBgn0028539.1 1 180 +
ChrX	gffcl	locus	47391207	47391800	.	+	.	ID=RLOC_00002727;geneIDs=FBgn0024846.path1;transcripts=FBgn0024846.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47391207	47391800	.	+	.	ID=FBgn0024846.mrna1;geneID=FBgn0024846.path1;Name=FBgn0024846;Dir=indeterminatecoverage=100.0;identity=100.0;matches=594;mismatches=0;indels=0;unknowns=0;Target=FBgn0024846 594 1 .;locus=RLOC_00002727
ChrX	stalkie_big_nohaplotig	exon	47391207	47391800	100	+	.	Parent=FBgn0024846.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47391207	47391800	.	+	0	Parent=FBgn0024846.mrna1
ChrX	gffcl	locus	47392616	47393091	.	-	.	ID=RLOC_00002728;geneIDs=comp146660_c0_seq1.path1;transcripts=comp146660_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47392616	47393091	.	-	.	ID=comp146660_c0_seq1.mrna1;geneID=comp146660_c0_seq1.path1;Name=comp146660_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.6;matches=474;mismatches=2;indels=0;unknowns=0;Target=comp146660_c0_seq1 482 7 .;CDS_Target=comp146660_c0_seq1 134 9 .;locus=RLOC_00002728
ChrX	stalkie_big_nohaplotig	exon	47392616	47393091	99	-	.	Parent=comp146660_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47392964	47393089	.	-	0	Parent=comp146660_c0_seq1.mrna1
ChrX	gffcl	locus	47395492	47396268	.	-	.	ID=RLOC_00002729;geneIDs=FBgn0028932.1.path1;transcripts=FBgn0028932.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47395492	47396268	.	-	.	ID=FBgn0028932.1.mrna1;geneID=FBgn0028932.1.path1;Name=FBgn0028932.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=777;mismatches=0;indels=0;unknowns=0;Target=FBgn0028932.1 777 1 .;locus=RLOC_00002729
ChrX	stalkie_big_nohaplotig	exon	47395492	47396268	100	-	.	Parent=FBgn0028932.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47395492	47396268	.	-	0	Parent=FBgn0028932.1.mrna1
ChrX	gffcl	locus	47434495	47435042	.	+	.	ID=RLOC_00002731;geneIDs=comp144900_c0_seq1.path1;transcripts=comp144900_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47434495	47435042	.	+	.	ID=comp144900_c0_seq1.mrna1;geneID=comp144900_c0_seq1.path1;Name=comp144900_c0_seq1;Dir=indeterminatecoverage=98.7;identity=99.8;matches=547;mismatches=1;indels=0;unknowns=0;Target=comp144900_c0_seq1 555 8 .;CDS_Target=comp144900_c0_seq1 469 242 .;locus=RLOC_00002731
ChrX	stalkie_big_nohaplotig	exon	47434495	47435042	99	+	.	Parent=comp144900_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47434729	47434956	.	+	0	Parent=comp144900_c0_seq1.mrna1
ChrX	gffcl	locus	47436851	47437893	.	+	.	ID=RLOC_00002732;geneIDs=comp150811_c0_seq1.path1;transcripts=comp150811_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47436851	47437893	.	+	.	ID=comp150811_c0_seq1.mrna1;geneID=comp150811_c0_seq1.path1;Name=comp150811_c0_seq1;Dir=indeterminatecoverage=99.9;identity=93.2;matches=1021;mismatches=17;indels=58;unknowns=0;Target=comp150811_c0_seq1 1091 1 .;CDS_Target=comp150811_c0_seq1 639 550 .;locus=RLOC_00002732
ChrX	stalkie_big_nohaplotig	exon	47436851	47437893	93	+	.	Parent=comp150811_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47437347	47437436	.	+	0	Parent=comp150811_c0_seq1.mrna1
ChrX	gffcl	locus	47444666	47444893	.	-	.	ID=RLOC_00002733;geneIDs=comp54497_c0_seq1.path1;transcripts=comp54497_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47444666	47444893	.	-	.	ID=comp54497_c0_seq1.mrna1;geneID=comp54497_c0_seq1.path1;Name=comp54497_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=227;mismatches=1;indels=0;unknowns=0;Target=comp54497_c0_seq1 228 1 .;CDS_Target=comp54497_c0_seq1 160 152 .;locus=RLOC_00002733
ChrX	stalkie_big_nohaplotig	exon	47444666	47444893	99	-	.	Parent=comp54497_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47444734	47444742	.	-	0	Parent=comp54497_c0_seq1.mrna1
ChrX	gffcl	locus	47445031	47445428	.	+	.	ID=RLOC_00002734;geneIDs=comp116984_c0_seq1.path1;transcripts=comp116984_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47445031	47445428	.	+	.	ID=comp116984_c0_seq1.mrna1;geneID=comp116984_c0_seq1.path1;Name=comp116984_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=395;mismatches=3;indels=0;unknowns=0;Target=comp116984_c0_seq1 398 1 .;CDS_Target=comp116984_c0_seq1 293 222 .;locus=RLOC_00002734
ChrX	stalkie_big_nohaplotig	exon	47445031	47445428	99	+	.	Parent=comp116984_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47445252	47445323	.	+	0	Parent=comp116984_c0_seq1.mrna1
ChrX	gffcl	locus	47445705	47446251	.	-	.	ID=RLOC_00002735;geneIDs=FBgn0261534.1.path1;transcripts=FBgn0261534.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47445705	47446251	.	-	.	ID=FBgn0261534.1.mrna1;geneID=FBgn0261534.1.path1;Name=FBgn0261534.1;Dir=sensecoverage=100.0;identity=99.8;matches=473;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002735
ChrX	stalkie_big_nohaplotig	exon	47445705	47445863	100	-	.	Parent=FBgn0261534.1.mrna1;Target=FBgn0261534.1 316 474 +
ChrX	stalkie_big_nohaplotig	exon	47445937	47446251	99	-	.	Parent=FBgn0261534.1.mrna1;Target=FBgn0261534.1 1 315 +
ChrX	stalkie_big_nohaplotig	CDS	47445705	47445863	.	-	0	Parent=FBgn0261534.1.mrna1;Target=FBgn0261534.1 316 474 +
ChrX	stalkie_big_nohaplotig	CDS	47445937	47446251	.	-	0	Parent=FBgn0261534.1.mrna1;Target=FBgn0261534.1 1 315 +
ChrX	gffcl	locus	47446965	47447577	.	+	.	ID=RLOC_00002736;geneIDs=comp149323_c0_seq1.path1;transcripts=comp149323_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47446965	47447577	.	+	.	ID=comp149323_c0_seq1.mrna1;geneID=comp149323_c0_seq1.path1;Name=comp149323_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=604;mismatches=9;indels=0;unknowns=0;Target=comp149323_c0_seq1 613 1 .;CDS_Target=comp149323_c0_seq1 504 349 .;locus=RLOC_00002736
ChrX	stalkie_big_nohaplotig	exon	47446965	47447577	98	+	.	Parent=comp149323_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47447313	47447468	.	+	0	Parent=comp149323_c0_seq1.mrna1
ChrX	gffcl	locus	47447597	47449166	.	+	.	ID=RLOC_00002737;geneIDs=comp113130_c0_seq1.path1,comp154534_c0_seq1.path1;transcripts=comp154534_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47447597	47448645	.	+	.	ID=comp154534_c0_seq1.mrna1;geneID=comp154534_c0_seq1.path1;Name=comp154534_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=1045;mismatches=4;indels=17;unknowns=0;Target=comp154534_c0_seq1 1066 1 .;CDS_Target=comp154534_c0_seq1 399 280 .;locus=RLOC_00002737
ChrX	stalkie_big_nohaplotig	exon	47447597	47448645	98	+	.	Parent=comp154534_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47447859	47447978	.	+	0	Parent=comp154534_c0_seq1.mrna1
ChrX	gffcl	locus	47470541	47473404	.	-	.	ID=RLOC_00002738;geneIDs=FBgn0261535.1.path1;transcripts=FBgn0261535.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47470541	47473404	.	-	.	ID=FBgn0261535.1.mrna1;geneID=FBgn0261535.1.path1;Name=FBgn0261535.1;Dir=sensecoverage=99.9;identity=100.0;matches=2064;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002738
ChrX	stalkie_big_nohaplotig	exon	47470541	47471399	100	-	.	Parent=FBgn0261535.1.mrna1;Target=FBgn0261535.1 1206 2064 +
ChrX	stalkie_big_nohaplotig	exon	47471465	47471574	100	-	.	Parent=FBgn0261535.1.mrna1;Target=FBgn0261535.1 1096 1205 +
ChrX	stalkie_big_nohaplotig	exon	47472017	47472202	100	-	.	Parent=FBgn0261535.1.mrna1;Target=FBgn0261535.1 910 1095 +
ChrX	stalkie_big_nohaplotig	exon	47472256	47472681	100	-	.	Parent=FBgn0261535.1.mrna1;Target=FBgn0261535.1 484 909 +
ChrX	stalkie_big_nohaplotig	exon	47472742	47472879	100	-	.	Parent=FBgn0261535.1.mrna1;Target=FBgn0261535.1 346 483 +
ChrX	stalkie_big_nohaplotig	exon	47472941	47473204	100	-	.	Parent=FBgn0261535.1.mrna1;Target=FBgn0261535.1 82 345 +
ChrX	stalkie_big_nohaplotig	exon	47473324	47473404	100	-	.	Parent=FBgn0261535.1.mrna1;Target=FBgn0261535.1 1 81 +
ChrX	stalkie_big_nohaplotig	CDS	47470541	47471399	.	-	1	Parent=FBgn0261535.1.mrna1;Target=FBgn0261535.1 1206 2064 +
ChrX	stalkie_big_nohaplotig	CDS	47471465	47471574	.	-	0	Parent=FBgn0261535.1.mrna1;Target=FBgn0261535.1 1096 1205 +
ChrX	stalkie_big_nohaplotig	CDS	47472017	47472202	.	-	0	Parent=FBgn0261535.1.mrna1;Target=FBgn0261535.1 910 1095 +
ChrX	stalkie_big_nohaplotig	CDS	47472256	47472681	.	-	0	Parent=FBgn0261535.1.mrna1;Target=FBgn0261535.1 484 909 +
ChrX	stalkie_big_nohaplotig	CDS	47472742	47472879	.	-	0	Parent=FBgn0261535.1.mrna1;Target=FBgn0261535.1 346 483 +
ChrX	stalkie_big_nohaplotig	CDS	47472941	47473204	.	-	0	Parent=FBgn0261535.1.mrna1;Target=FBgn0261535.1 82 345 +
ChrX	stalkie_big_nohaplotig	CDS	47473324	47473404	.	-	0	Parent=FBgn0261535.1.mrna1;Target=FBgn0261535.1 1 81 +
ChrX	gffcl	locus	47486222	47488808	.	+	.	ID=RLOC_00002739;geneIDs=FBgn0015791.1.path1;transcripts=FBgn0015791.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47486222	47488808	.	+	.	ID=FBgn0015791.1.mrna1;geneID=FBgn0015791.1.path1;Name=FBgn0015791.1;Dir=sensecoverage=98.6;identity=100.0;matches=654;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002739
ChrX	stalkie_big_nohaplotig	exon	47486222	47486336	100	+	.	Parent=FBgn0015791.1.mrna1;Target=FBgn0015791.1 10 124 +
ChrX	stalkie_big_nohaplotig	exon	47486406	47486586	100	+	.	Parent=FBgn0015791.1.mrna1;Target=FBgn0015791.1 125 305 +
ChrX	stalkie_big_nohaplotig	exon	47487420	47487602	100	+	.	Parent=FBgn0015791.1.mrna1;Target=FBgn0015791.1 306 488 +
ChrX	stalkie_big_nohaplotig	exon	47488634	47488808	100	+	.	Parent=FBgn0015791.1.mrna1;Target=FBgn0015791.1 489 663 +
ChrX	stalkie_big_nohaplotig	CDS	47486222	47486336	.	+	0	Parent=FBgn0015791.1.mrna1;Target=FBgn0015791.1 10 124 +
ChrX	stalkie_big_nohaplotig	CDS	47486406	47486586	.	+	2	Parent=FBgn0015791.1.mrna1;Target=FBgn0015791.1 125 305 +
ChrX	stalkie_big_nohaplotig	CDS	47487420	47487602	.	+	1	Parent=FBgn0015791.1.mrna1;Target=FBgn0015791.1 306 488 +
ChrX	stalkie_big_nohaplotig	CDS	47488634	47488808	.	+	1	Parent=FBgn0015791.1.mrna1;Target=FBgn0015791.1 489 663 +
ChrX	gffcl	locus	47490396	47491139	.	+	.	ID=RLOC_00002740;geneIDs=comp134839_c0_seq1.path1;transcripts=comp134839_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47490396	47491139	.	+	.	ID=comp134839_c0_seq1.mrna1;geneID=comp134839_c0_seq1.path1;Name=comp134839_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=735;mismatches=7;indels=2;unknowns=0;Target=comp134839_c0_seq1 742 1 .;CDS_Target=comp134839_c0_seq1 347 225 .;locus=RLOC_00002740
ChrX	stalkie_big_nohaplotig	exon	47490396	47491139	98	+	.	Parent=comp134839_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47490622	47490744	.	+	0	Parent=comp134839_c0_seq1.mrna1
ChrX	gffcl	locus	47493225	47496103	.	+	.	ID=RLOC_00002741;geneIDs=FBgn0034826.1.path1;transcripts=FBgn0034826.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47493225	47496103	.	+	.	ID=FBgn0034826.1.mrna1;geneID=FBgn0034826.1.path1;Name=FBgn0034826.1;Dir=sensecoverage=100.0;identity=100.0;matches=1206;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002741
ChrX	stalkie_big_nohaplotig	exon	47493225	47493364	100	+	.	Parent=FBgn0034826.1.mrna1;Target=FBgn0034826.1 1 140 +
ChrX	stalkie_big_nohaplotig	exon	47493430	47493507	100	+	.	Parent=FBgn0034826.1.mrna1;Target=FBgn0034826.1 141 218 +
ChrX	stalkie_big_nohaplotig	exon	47493567	47493965	100	+	.	Parent=FBgn0034826.1.mrna1;Target=FBgn0034826.1 219 617 +
ChrX	stalkie_big_nohaplotig	exon	47495441	47495748	100	+	.	Parent=FBgn0034826.1.mrna1;Target=FBgn0034826.1 618 925 +
ChrX	stalkie_big_nohaplotig	exon	47495823	47496103	100	+	.	Parent=FBgn0034826.1.mrna1;Target=FBgn0034826.1 926 1206 +
ChrX	stalkie_big_nohaplotig	CDS	47493225	47493364	.	+	0	Parent=FBgn0034826.1.mrna1;Target=FBgn0034826.1 1 140 +
ChrX	stalkie_big_nohaplotig	CDS	47493430	47493507	.	+	1	Parent=FBgn0034826.1.mrna1;Target=FBgn0034826.1 141 218 +
ChrX	stalkie_big_nohaplotig	CDS	47493567	47493965	.	+	1	Parent=FBgn0034826.1.mrna1;Target=FBgn0034826.1 219 617 +
ChrX	stalkie_big_nohaplotig	CDS	47495441	47495748	.	+	1	Parent=FBgn0034826.1.mrna1;Target=FBgn0034826.1 618 925 +
ChrX	stalkie_big_nohaplotig	CDS	47495823	47496103	.	+	2	Parent=FBgn0034826.1.mrna1;Target=FBgn0034826.1 926 1206 +
ChrX	gffcl	locus	47497932	47498591	.	+	.	ID=RLOC_00002742;geneIDs=FBgn0028858.5.path1;transcripts=FBgn0028858.5.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47497932	47498591	.	+	.	ID=FBgn0028858.5.mrna1;geneID=FBgn0028858.5.path1;Name=FBgn0028858.5;Dir=sensecoverage=95.4;identity=100.0;matches=604;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002742
ChrX	stalkie_big_nohaplotig	exon	47497932	47498253	100	+	.	Parent=FBgn0028858.5.mrna1;Target=FBgn0028858.5 30 351 +
ChrX	stalkie_big_nohaplotig	exon	47498310	47498591	100	+	.	Parent=FBgn0028858.5.mrna1;Target=FBgn0028858.5 352 633 +
ChrX	stalkie_big_nohaplotig	CDS	47497933	47498253	.	+	0	Parent=FBgn0028858.5.mrna1;Target=FBgn0028858.5 31 351 +
ChrX	stalkie_big_nohaplotig	CDS	47498310	47498591	.	+	0	Parent=FBgn0028858.5.mrna1;Target=FBgn0028858.5 352 633 +
ChrX	gffcl	locus	47502058	47503380	.	-	.	ID=RLOC_00002743;geneIDs=comp162384_c0_seq1.path1;transcripts=comp162384_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47502058	47503380	.	-	.	ID=comp162384_c0_seq1.mrna1;geneID=comp162384_c0_seq1.path1;Name=comp162384_c0_seq1;Dir=indeterminatecoverage=98.7;identity=98.7;matches=1312;mismatches=5;indels=12;unknowns=0;Target=comp162384_c0_seq1 1323 1 .;CDS_Target=comp162384_c0_seq1 547 374 .;locus=RLOC_00002743
ChrX	stalkie_big_nohaplotig	exon	47502058	47503380	98	-	.	Parent=comp162384_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47502834	47503007	.	-	0	Parent=comp162384_c0_seq1.mrna1
ChrX	gffcl	locus	47504672	47505532	.	-	.	ID=RLOC_00002744;geneIDs=FBgn0001970.path1;transcripts=FBgn0001970.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47504672	47505532	.	-	.	ID=FBgn0001970.mrna1;geneID=FBgn0001970.path1;Name=FBgn0001970;Dir=indeterminatecoverage=100.0;identity=100.0;matches=857;mismatches=0;indels=0;unknowns=4;Target=FBgn0001970 861 1 .;locus=RLOC_00002744
ChrX	stalkie_big_nohaplotig	exon	47504672	47505532	100	-	.	Parent=FBgn0001970.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47504672	47505532	.	-	0	Parent=FBgn0001970.mrna1
ChrX	gffcl	locus	47505929	47508077	.	+	.	ID=RLOC_00002745;geneIDs=FBgn0015546.path1,comp158700_c4_seq1.path1;transcripts=FBgn0015546.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47506067	47508077	.	+	.	ID=FBgn0015546.mrna1;geneID=FBgn0015546.path1;Name=FBgn0015546;Dir=sensecoverage=99.9;identity=99.7;matches=1627;mismatches=5;indels=0;unknowns=2;locus=RLOC_00002745
ChrX	stalkie_big_nohaplotig	exon	47506067	47506250	99	+	.	Parent=FBgn0015546.mrna1;Target=FBgn0015546 1 184 +
ChrX	stalkie_big_nohaplotig	exon	47506312	47506361	100	+	.	Parent=FBgn0015546.mrna1;Target=FBgn0015546 185 234 +
ChrX	stalkie_big_nohaplotig	exon	47506564	47507088	100	+	.	Parent=FBgn0015546.mrna1;Target=FBgn0015546 235 759 +
ChrX	stalkie_big_nohaplotig	exon	47507143	47507414	100	+	.	Parent=FBgn0015546.mrna1;Target=FBgn0015546 760 1031 +
ChrX	stalkie_big_nohaplotig	exon	47507475	47508077	99	+	.	Parent=FBgn0015546.mrna1;Target=FBgn0015546 1032 1634 +
ChrX	stalkie_big_nohaplotig	CDS	47506067	47506250	.	+	0	Parent=FBgn0015546.mrna1;Target=FBgn0015546 1 184 +
ChrX	stalkie_big_nohaplotig	CDS	47506312	47506361	.	+	2	Parent=FBgn0015546.mrna1;Target=FBgn0015546 185 234 +
ChrX	stalkie_big_nohaplotig	CDS	47506564	47507088	.	+	0	Parent=FBgn0015546.mrna1;Target=FBgn0015546 235 759 +
ChrX	stalkie_big_nohaplotig	CDS	47507143	47507414	.	+	0	Parent=FBgn0015546.mrna1;Target=FBgn0015546 760 1031 +
ChrX	stalkie_big_nohaplotig	CDS	47507475	47508075	.	+	1	Parent=FBgn0015546.mrna1;Target=FBgn0015546 1032 1632 +
ChrX	gffcl	locus	47515594	47517239	.	-	.	ID=RLOC_00002746;geneIDs=comp157098_c0_seq1.path1;transcripts=comp157098_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47515594	47517239	.	-	.	ID=comp157098_c0_seq1.mrna1;geneID=comp157098_c0_seq1.path1;Name=comp157098_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1641;mismatches=5;indels=9;unknowns=0;Target=comp157098_c0_seq1 1655 1 .;CDS_Target=comp157098_c0_seq1 490 431 .;locus=RLOC_00002746
ChrX	stalkie_big_nohaplotig	exon	47515594	47517239	99	-	.	Parent=comp157098_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47516754	47516809	.	-	0	Parent=comp157098_c0_seq1.mrna1
ChrX	gffcl	locus	47517880	47519981	.	.	.	ID=RLOC_00002747;geneIDs=comp150055_c0_seq1.path1,comp161042_c1_seq1.path1;transcripts=comp161042_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47517880	47519322	.	+	.	ID=comp161042_c1_seq1.mrna1;geneID=comp161042_c1_seq1.path1;Name=comp161042_c1_seq1;Dir=indeterminatecoverage=90.2;identity=99.9;matches=1443;mismatches=0;indels=2;unknowns=0;Target=comp161042_c1_seq1 1602 158 .;CDS_Target=comp161042_c1_seq1 977 678 .;locus=RLOC_00002747
ChrX	stalkie_big_nohaplotig	exon	47517880	47519322	99	+	.	Parent=comp161042_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47518399	47518698	.	+	0	Parent=comp161042_c1_seq1.mrna1
ChrX	gffcl	locus	47520105	47524280	.	-	.	ID=RLOC_00002748;geneIDs=FBgn0261999.1.path1;transcripts=FBgn0261999.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47520105	47524280	.	-	.	ID=FBgn0261999.1.mrna1;geneID=FBgn0261999.1.path1;Name=FBgn0261999.1;Dir=sensecoverage=100.0;identity=100.0;matches=2759;mismatches=0;indels=1;unknowns=0;Target=FBgn0261999.1 3 86 +;locus=RLOC_00002748
ChrX	stalkie_big_nohaplotig	exon	47520105	47520212	100	-	.	Parent=FBgn0261999.1.mrna1;Target=FBgn0261999.1 2653 2760 +
ChrX	stalkie_big_nohaplotig	exon	47520538	47520959	100	-	.	Parent=FBgn0261999.1.mrna1;Target=FBgn0261999.1 2231 2652 +
ChrX	stalkie_big_nohaplotig	exon	47521044	47521137	100	-	.	Parent=FBgn0261999.1.mrna1;Target=FBgn0261999.1 2137 2230 +
ChrX	stalkie_big_nohaplotig	exon	47521458	47521700	100	-	.	Parent=FBgn0261999.1.mrna1;Target=FBgn0261999.1 1894 2136 +
ChrX	stalkie_big_nohaplotig	exon	47521780	47522285	100	-	.	Parent=FBgn0261999.1.mrna1;Target=FBgn0261999.1 1388 1893 +
ChrX	stalkie_big_nohaplotig	exon	47522349	47522497	100	-	.	Parent=FBgn0261999.1.mrna1;Target=FBgn0261999.1 1239 1387 +
ChrX	stalkie_big_nohaplotig	exon	47522555	47522931	100	-	.	Parent=FBgn0261999.1.mrna1;Target=FBgn0261999.1 862 1238 +
ChrX	stalkie_big_nohaplotig	exon	47523134	47523211	100	-	.	Parent=FBgn0261999.1.mrna1;Target=FBgn0261999.1 784 861 +
ChrX	stalkie_big_nohaplotig	exon	47523272	47523442	100	-	.	Parent=FBgn0261999.1.mrna1;Target=FBgn0261999.1 613 783 +
ChrX	stalkie_big_nohaplotig	exon	47523514	47523873	100	-	.	Parent=FBgn0261999.1.mrna1;Target=FBgn0261999.1 253 612 +
ChrX	stalkie_big_nohaplotig	exon	47524030	47524280	99	-	.	Parent=FBgn0261999.1.mrna1;Target=FBgn0261999.1 1 252 +
ChrX	stalkie_big_nohaplotig	CDS	47524196	47524278	.	-	0	Parent=FBgn0261999.1.mrna1
ChrX	gffcl	locus	47529462	47530493	.	+	.	ID=RLOC_00002749;geneIDs=Dp_FBgn0244711.1.path6;transcripts=Dp_FBgn0244711.1.mrna6
ChrX	stalkie_big_nohaplotig	mRNA	47529462	47530493	.	+	.	ID=Dp_FBgn0244711.1.mrna6;geneID=Dp_FBgn0244711.1.path6;Name=Dp_FBgn0244711.1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1020;mismatches=12;indels=0;unknowns=0;Target=Dp_FBgn0244711.1 1032 1 .;locus=RLOC_00002749
ChrX	stalkie_big_nohaplotig	exon	47529462	47530493	98	+	.	Parent=Dp_FBgn0244711.1.mrna6
ChrX	stalkie_big_nohaplotig	CDS	47529462	47530493	.	+	0	Parent=Dp_FBgn0244711.1.mrna6
ChrX	gffcl	locus	47541964	47542892	.	+	.	ID=RLOC_00002750;geneIDs=comp150283_c0_seq1.path2;transcripts=comp150283_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	47541964	47542892	.	+	.	ID=comp150283_c0_seq1.mrna2;geneID=comp150283_c0_seq1.path2;Name=comp150283_c0_seq1;Dir=indeterminatecoverage=91.8;identity=99.9;matches=928;mismatches=1;indels=0;unknowns=0;Target=comp150283_c0_seq1 1012 84 .;CDS_Target=comp150283_c0_seq1 567 283 .;locus=RLOC_00002750
ChrX	stalkie_big_nohaplotig	exon	47541964	47542892	99	+	.	Parent=comp150283_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	47542163	47542447	.	+	0	Parent=comp150283_c0_seq1.mrna2
ChrX	gffcl	locus	47569357	47569540	.	-	.	ID=RLOC_00002751;geneIDs=comp157434_c1_seq1.path2;transcripts=comp157434_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	47569357	47569540	.	-	.	ID=comp157434_c1_seq1.mrna2;geneID=comp157434_c1_seq1.path2;Name=comp157434_c1_seq1;Dir=indeterminatecoverage=9.3;identity=99.5;matches=183;mismatches=1;indels=0;unknowns=0;Target=comp157434_c1_seq1 1970 1787 .;locus=RLOC_00002751
ChrX	stalkie_big_nohaplotig	exon	47569357	47569540	99	-	.	Parent=comp157434_c1_seq1.mrna2
ChrX	gffcl	locus	47599222	47600052	.	-	.	ID=RLOC_00002752;geneIDs=ORF2636.path1;transcripts=ORF2636.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47599222	47600052	.	-	.	ID=ORF2636.mrna1;geneID=ORF2636.path1;Name=ORF2636;Dir=indeterminatecoverage=100.0;identity=99.8;matches=829;mismatches=2;indels=0;unknowns=0;Target=ORF2636 831 1 .;locus=RLOC_00002752
ChrX	stalkie_big_nohaplotig	exon	47599222	47600052	99	-	.	Parent=ORF2636.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47599222	47600052	.	-	0	Parent=ORF2636.mrna1
ChrX	gffcl	locus	47612139	47613290	.	-	.	ID=RLOC_00002753;geneIDs=comp149504_c0_seq1.path1;transcripts=comp149504_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47612139	47613290	.	-	.	ID=comp149504_c0_seq1.mrna1;geneID=comp149504_c0_seq1.path1;Name=comp149504_c0_seq1;Dir=sensecoverage=99.8;identity=99.0;matches=986;mismatches=5;indels=5;unknowns=0;Target=comp149504_c0_seq1 167 640 +;locus=RLOC_00002753
ChrX	stalkie_big_nohaplotig	exon	47612139	47612412	96	-	.	Parent=comp149504_c0_seq1.mrna1;Target=comp149504_c0_seq1 719 997 +
ChrX	stalkie_big_nohaplotig	exon	47612515	47613084	100	-	.	Parent=comp149504_c0_seq1.mrna1;Target=comp149504_c0_seq1 149 718 +
ChrX	stalkie_big_nohaplotig	exon	47613144	47613290	99	-	.	Parent=comp149504_c0_seq1.mrna1;Target=comp149504_c0_seq1 2 148 +
ChrX	stalkie_big_nohaplotig	CDS	47612593	47613066	.	-	0	Parent=comp149504_c0_seq1.mrna1
ChrX	gffcl	locus	47617666	47618602	.	-	.	ID=RLOC_00002754;geneIDs=ORF2310.path1;transcripts=ORF2310.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47617666	47618602	.	-	.	ID=ORF2310.mrna1;geneID=ORF2310.path1;Name=ORF2310;Dir=sensecoverage=99.7;identity=99.1;matches=868;mismatches=5;indels=3;unknowns=0;locus=RLOC_00002754
ChrX	stalkie_big_nohaplotig	exon	47617666	47618517	99	-	.	Parent=ORF2310.mrna1;Target=ORF2310 25 879 +
ChrX	stalkie_big_nohaplotig	exon	47618582	47618602	100	-	.	Parent=ORF2310.mrna1;Target=ORF2310 4 24 +
ChrX	stalkie_big_nohaplotig	CDS	47617666	47618517	.	-	0	Parent=ORF2310.mrna1;Target=ORF2310 25 879 +
ChrX	stalkie_big_nohaplotig	CDS	47618582	47618602	.	-	0	Parent=ORF2310.mrna1;Target=ORF2310 4 24 +
ChrX	gffcl	locus	47638499	47640376	.	-	.	ID=RLOC_00002755;geneIDs=FBgn0023175.2.path1;transcripts=FBgn0023175.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47638499	47640376	.	-	.	ID=FBgn0023175.2.mrna1;geneID=FBgn0023175.2.path1;Name=FBgn0023175.2;Dir=sensecoverage=99.9;identity=93.4;matches=949;mismatches=55;indels=12;unknowns=0;locus=RLOC_00002755
ChrX	stalkie_big_nohaplotig	exon	47638499	47638632	99	-	.	Parent=FBgn0023175.2.mrna1;Target=FBgn0023175.2 878 1011 +
ChrX	stalkie_big_nohaplotig	exon	47638807	47639009	96	-	.	Parent=FBgn0023175.2.mrna1;Target=FBgn0023175.2 675 877 +
ChrX	stalkie_big_nohaplotig	exon	47639166	47639740	92	-	.	Parent=FBgn0023175.2.mrna1;Target=FBgn0023175.2 100 674 +
ChrX	stalkie_big_nohaplotig	exon	47640279	47640376	83	-	.	Parent=FBgn0023175.2.mrna1;Target=FBgn0023175.2 2 99 +
ChrX	stalkie_big_nohaplotig	CDS	47638499	47638632	.	-	2	Parent=FBgn0023175.2.mrna1;Target=FBgn0023175.2 878 1011 +
ChrX	stalkie_big_nohaplotig	CDS	47638807	47639009	.	-	1	Parent=FBgn0023175.2.mrna1;Target=FBgn0023175.2 675 877 +
ChrX	stalkie_big_nohaplotig	CDS	47639166	47639740	.	-	0	Parent=FBgn0023175.2.mrna1;Target=FBgn0023175.2 100 674 +
ChrX	stalkie_big_nohaplotig	CDS	47640279	47640374	.	-	0	Parent=FBgn0023175.2.mrna1;Target=FBgn0023175.2 4 99 +
ChrX	gffcl	locus	47664350	47666005	.	-	.	ID=RLOC_00002756;geneIDs=FBgn0023175.3.path1;transcripts=FBgn0023175.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47664350	47666005	.	-	.	ID=FBgn0023175.3.mrna1;geneID=FBgn0023175.3.path1;Name=FBgn0023175.3;Dir=sensecoverage=99.4;identity=97.9;matches=922;mismatches=20;indels=0;unknowns=0;locus=RLOC_00002756
ChrX	stalkie_big_nohaplotig	exon	47664350	47664614	93	-	.	Parent=FBgn0023175.3.mrna1;Target=FBgn0023175.3 678 942 +
ChrX	stalkie_big_nohaplotig	exon	47664771	47665345	99	-	.	Parent=FBgn0023175.3.mrna1;Target=FBgn0023175.3 103 677 +
ChrX	stalkie_big_nohaplotig	exon	47665904	47666005	100	-	.	Parent=FBgn0023175.3.mrna1;Target=FBgn0023175.3 1 102 +
ChrX	stalkie_big_nohaplotig	CDS	47664350	47664614	.	-	1	Parent=FBgn0023175.3.mrna1;Target=FBgn0023175.3 678 942 +
ChrX	stalkie_big_nohaplotig	CDS	47664771	47665345	.	-	0	Parent=FBgn0023175.3.mrna1;Target=FBgn0023175.3 103 677 +
ChrX	stalkie_big_nohaplotig	CDS	47665904	47666005	.	-	0	Parent=FBgn0023175.3.mrna1;Target=FBgn0023175.3 1 102 +
ChrX	gffcl	locus	47695703	47696018	.	+	.	ID=RLOC_00002757;geneIDs=comp154146_c0_seq1.path1;transcripts=comp154146_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47695703	47696018	.	+	.	ID=comp154146_c0_seq1.mrna1;geneID=comp154146_c0_seq1.path1;Name=comp154146_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=314;mismatches=2;indels=2;unknowns=0;Target=comp154146_c0_seq1 318 1 .;CDS_Target=comp154146_c0_seq1 67 2 .;locus=RLOC_00002757
ChrX	stalkie_big_nohaplotig	exon	47695703	47696018	98	+	.	Parent=comp154146_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47695704	47695769	.	+	0	Parent=comp154146_c0_seq1.mrna1
ChrX	gffcl	locus	47700537	47700777	.	+	.	ID=RLOC_00002758;geneIDs=comp72531_c0_seq1.path1;transcripts=comp72531_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47700537	47700777	.	+	.	ID=comp72531_c0_seq1.mrna1;geneID=comp72531_c0_seq1.path1;Name=comp72531_c0_seq1;Dir=indeterminatecoverage=81.1;identity=100.0;matches=241;mismatches=0;indels=0;unknowns=0;Target=comp72531_c0_seq1 295 55 .;CDS_Target=comp72531_c0_seq1 156 55 .;locus=RLOC_00002758
ChrX	stalkie_big_nohaplotig	exon	47700537	47700777	100	+	.	Parent=comp72531_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47700537	47700638	.	+	0	Parent=comp72531_c0_seq1.mrna1
ChrX	gffcl	locus	47702477	47703267	.	.	.	ID=RLOC_00002759;geneIDs=comp135953_c0_seq1.path1,comp146538_c0_seq1.path1;transcripts=comp135953_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47702477	47702994	.	-	.	ID=comp135953_c0_seq1.mrna1;geneID=comp135953_c0_seq1.path1;Name=comp135953_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.7;matches=512;mismatches=5;indels=2;unknowns=0;Target=comp135953_c0_seq1 518 1 .;CDS_Target=comp135953_c0_seq1 159 1 .;locus=RLOC_00002759
ChrX	stalkie_big_nohaplotig	exon	47702477	47702994	98	-	.	Parent=comp135953_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47702835	47702994	.	-	0	Parent=comp135953_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47705944	47762444	.	-	.	ID=comp147657_c0_seq1.mrna1;geneID=comp147657_c0_seq1.path1;Name=comp147657_c0_seq1;Dir=indeterminatecoverage=75.7;identity=93.5;matches=487;mismatches=19;indels=15;unknowns=0;locus=RLOC_00002760
ChrX	stalkie_big_nohaplotig	exon	47705944	47706312	96	-	.	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 686 313 .
ChrX	stalkie_big_nohaplotig	exon	47706591	47706616	76	-	.	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 312 287 .
ChrX	stalkie_big_nohaplotig	exon	47707739	47707745	100	-	.	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 286 280 .
ChrX	stalkie_big_nohaplotig	exon	47708377	47708386	55	-	.	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 279 262 .
ChrX	stalkie_big_nohaplotig	exon	47709658	47709666	100	-	.	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 261 253 .
ChrX	stalkie_big_nohaplotig	exon	47716966	47716979	100	-	.	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 252 239 .
ChrX	stalkie_big_nohaplotig	exon	47720359	47720360	100	-	.	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 238 237 .
ChrX	stalkie_big_nohaplotig	exon	47722701	47722716	75	-	.	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 236 221 .
ChrX	stalkie_big_nohaplotig	exon	47724718	47724719	100	-	.	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 220 219 .
ChrX	stalkie_big_nohaplotig	exon	47726341	47726347	100	-	.	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 218 212 .
ChrX	stalkie_big_nohaplotig	exon	47732221	47732225	100	-	.	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 211 207 .
ChrX	stalkie_big_nohaplotig	exon	47735921	47735925	100	-	.	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 206 202 .
ChrX	stalkie_big_nohaplotig	exon	47739627	47739631	100	-	.	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 201 197 .
ChrX	stalkie_big_nohaplotig	exon	47743262	47743268	100	-	.	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 196 190 .
ChrX	stalkie_big_nohaplotig	exon	47748514	47748515	100	-	.	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 189 188 .
ChrX	stalkie_big_nohaplotig	exon	47753279	47753282	100	-	.	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 187 184 .
ChrX	stalkie_big_nohaplotig	exon	47761181	47761183	100	-	.	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 183 181 .
ChrX	stalkie_big_nohaplotig	exon	47762369	47762375	85	-	.	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 180 174 .
ChrX	stalkie_big_nohaplotig	exon	47762438	47762444	100	-	.	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 173 167 .
ChrX	stalkie_big_nohaplotig	CDS	47706311	47706312	.	-	1	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 314 313 .
ChrX	stalkie_big_nohaplotig	CDS	47706591	47706616	.	-	0	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 312 287 .
ChrX	stalkie_big_nohaplotig	CDS	47707739	47707745	.	-	1	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 286 280 .
ChrX	stalkie_big_nohaplotig	CDS	47708377	47708386	.	-	2	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 279 262 .
ChrX	stalkie_big_nohaplotig	CDS	47709658	47709666	.	-	2	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 261 253 .
ChrX	stalkie_big_nohaplotig	CDS	47716966	47716979	.	-	1	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 252 239 .
ChrX	stalkie_big_nohaplotig	CDS	47720359	47720360	.	-	0	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 238 237 .
ChrX	stalkie_big_nohaplotig	CDS	47722701	47722716	.	-	1	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 236 221 .
ChrX	stalkie_big_nohaplotig	CDS	47724718	47724719	.	-	0	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 220 219 .
ChrX	stalkie_big_nohaplotig	CDS	47726341	47726347	.	-	1	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 218 212 .
ChrX	stalkie_big_nohaplotig	CDS	47732221	47732225	.	-	0	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 211 207 .
ChrX	stalkie_big_nohaplotig	CDS	47735921	47735925	.	-	2	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 206 202 .
ChrX	stalkie_big_nohaplotig	CDS	47739627	47739631	.	-	1	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 201 197 .
ChrX	stalkie_big_nohaplotig	CDS	47743262	47743268	.	-	2	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 196 190 .
ChrX	stalkie_big_nohaplotig	CDS	47748514	47748515	.	-	1	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 189 188 .
ChrX	stalkie_big_nohaplotig	CDS	47753279	47753282	.	-	2	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 187 184 .
ChrX	stalkie_big_nohaplotig	CDS	47761181	47761183	.	-	2	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 183 181 .
ChrX	stalkie_big_nohaplotig	CDS	47762369	47762375	.	-	0	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 180 174 .
ChrX	stalkie_big_nohaplotig	CDS	47762438	47762443	.	-	0	Parent=comp147657_c0_seq1.mrna1;Target=comp147657_c0_seq1 173 168 .
ChrX	gffcl	locus	47708852	47709265	.	-	.	ID=RLOC_00002761;geneIDs=comp143410_c0_seq1.path1;transcripts=comp143410_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47708852	47709265	.	-	.	ID=comp143410_c0_seq1.mrna1;geneID=comp143410_c0_seq1.path1;Name=comp143410_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=410;mismatches=4;indels=0;unknowns=0;Target=comp143410_c0_seq1 414 1 .;CDS_Target=comp143410_c0_seq1 64 2 .;locus=RLOC_00002761
ChrX	stalkie_big_nohaplotig	exon	47708852	47709265	99	-	.	Parent=comp143410_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47709202	47709264	.	-	0	Parent=comp143410_c0_seq1.mrna1
ChrX	gffcl	locus	47729048	49677249	.	-	.	ID=RLOC_00002762;geneIDs=comp117810_c0_seq1.path1;transcripts=comp117810_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47729048	49677249	.	-	.	ID=comp117810_c0_seq1.mrna1;geneID=comp117810_c0_seq1.path1;Name=comp117810_c0_seq1;Dir=sensecoverage=100.0;identity=96.1;matches=199;mismatches=8;indels=0;unknowns=0;locus=RLOC_00002762
ChrX	stalkie_big_nohaplotig	exon	47729048	47729094	85	-	.	Parent=comp117810_c0_seq1.mrna1;Target=comp117810_c0_seq1 161 207 +
ChrX	stalkie_big_nohaplotig	exon	49677090	49677249	99	-	.	Parent=comp117810_c0_seq1.mrna1;Target=comp117810_c0_seq1 1 160 +
ChrX	stalkie_big_nohaplotig	CDS	47729050	47729094	.	-	0	Parent=comp117810_c0_seq1.mrna1;Target=comp117810_c0_seq1 161 205 +
ChrX	stalkie_big_nohaplotig	CDS	49677090	49677110	.	-	0	Parent=comp117810_c0_seq1.mrna1;Target=comp117810_c0_seq1 140 160 +
ChrX	gffcl	locus	47773728	47779133	.	+	.	ID=RLOC_00002763;geneIDs=FBgn0028406.1.path1;transcripts=FBgn0028406.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47773728	47779133	.	+	.	ID=FBgn0028406.1.mrna1;geneID=FBgn0028406.1.path1;Name=FBgn0028406.1;Dir=sensecoverage=100.0;identity=100.0;matches=1296;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002763
ChrX	stalkie_big_nohaplotig	exon	47773728	47773907	100	+	.	Parent=FBgn0028406.1.mrna1;Target=FBgn0028406.1 1 180 +
ChrX	stalkie_big_nohaplotig	exon	47776924	47777047	100	+	.	Parent=FBgn0028406.1.mrna1;Target=FBgn0028406.1 181 304 +
ChrX	stalkie_big_nohaplotig	exon	47778142	47779133	100	+	.	Parent=FBgn0028406.1.mrna1;Target=FBgn0028406.1 305 1296 +
ChrX	stalkie_big_nohaplotig	CDS	47773728	47773907	.	+	0	Parent=FBgn0028406.1.mrna1;Target=FBgn0028406.1 1 180 +
ChrX	stalkie_big_nohaplotig	CDS	47776924	47777047	.	+	0	Parent=FBgn0028406.1.mrna1;Target=FBgn0028406.1 181 304 +
ChrX	stalkie_big_nohaplotig	CDS	47778142	47779133	.	+	2	Parent=FBgn0028406.1.mrna1;Target=FBgn0028406.1 305 1296 +
ChrX	gffcl	locus	47780495	47780848	.	-	.	ID=RLOC_00002764;geneIDs=comp147228_c0_seq1.path1;transcripts=comp147228_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47780495	47780848	.	-	.	ID=comp147228_c0_seq1.mrna1;geneID=comp147228_c0_seq1.path1;Name=comp147228_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=347;mismatches=5;indels=2;unknowns=0;Target=comp147228_c0_seq1 352 1 .;CDS_Target=comp147228_c0_seq1 127 35 .;locus=RLOC_00002764
ChrX	stalkie_big_nohaplotig	exon	47780495	47780848	98	-	.	Parent=comp147228_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47780722	47780814	.	-	0	Parent=comp147228_c0_seq1.mrna1
ChrX	gffcl	locus	47799486	47800690	.	-	.	ID=RLOC_00002765;geneIDs=comp156740_c0_seq1.path1;transcripts=comp156740_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47799486	47800690	.	-	.	ID=comp156740_c0_seq1.mrna1;geneID=comp156740_c0_seq1.path1;Name=comp156740_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.5;matches=1199;mismatches=6;indels=0;unknowns=0;Target=comp156740_c0_seq1 1205 1 .;CDS_Target=comp156740_c0_seq1 933 649 .;locus=RLOC_00002765
ChrX	stalkie_big_nohaplotig	exon	47799486	47800690	99	-	.	Parent=comp156740_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47799758	47800042	.	-	0	Parent=comp156740_c0_seq1.mrna1
ChrX	gffcl	locus	47813420	47813589	.	-	.	ID=RLOC_00002766;geneIDs=comp144128_c1_seq1.path2;transcripts=comp144128_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	47813420	47813589	.	-	.	ID=comp144128_c1_seq1.mrna2;geneID=comp144128_c1_seq1.path2;Name=comp144128_c1_seq1;Dir=indeterminatecoverage=4.1;identity=99.4;matches=169;mismatches=1;indels=0;unknowns=0;Target=comp144128_c1_seq1 4152 3983 .;locus=RLOC_00002766
ChrX	stalkie_big_nohaplotig	exon	47813420	47813589	99	-	.	Parent=comp144128_c1_seq1.mrna2
ChrX	gffcl	locus	47815959	47816382	.	-	.	ID=RLOC_00002767;geneIDs=comp148797_c0_seq1.path2;transcripts=comp148797_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	47815959	47816382	.	-	.	ID=comp148797_c0_seq1.mrna2;geneID=comp148797_c0_seq1.path2;Name=comp148797_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.8;matches=419;mismatches=5;indels=0;unknowns=0;Target=comp148797_c0_seq1 425 2 .;CDS_Target=comp148797_c0_seq1 282 172 .;locus=RLOC_00002767
ChrX	stalkie_big_nohaplotig	exon	47815959	47816382	98	-	.	Parent=comp148797_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	47816102	47816212	.	-	0	Parent=comp148797_c0_seq1.mrna2
ChrX	gffcl	locus	47832967	47834704	.	-	.	ID=RLOC_00002769;geneIDs=comp145976_c0_seq1.path1;transcripts=comp145976_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47832967	47834704	.	-	.	ID=comp145976_c0_seq1.mrna1;geneID=comp145976_c0_seq1.path1;Name=comp145976_c0_seq1;Dir=antisensecoverage=98.3;identity=100.0;matches=629;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002769
ChrX	stalkie_big_nohaplotig	exon	47832967	47833146	100	-	.	Parent=comp145976_c0_seq1.mrna1;Target=comp145976_c0_seq1 8 187 -
ChrX	stalkie_big_nohaplotig	exon	47834198	47834365	100	-	.	Parent=comp145976_c0_seq1.mrna1;Target=comp145976_c0_seq1 188 355 -
ChrX	stalkie_big_nohaplotig	exon	47834424	47834704	100	-	.	Parent=comp145976_c0_seq1.mrna1;Target=comp145976_c0_seq1 356 636 -
ChrX	stalkie_big_nohaplotig	CDS	47833051	47833146	.	-	0	Parent=comp145976_c0_seq1.mrna1;Target=comp145976_c0_seq1 92 187 .
ChrX	stalkie_big_nohaplotig	CDS	47834198	47834365	.	-	0	Parent=comp145976_c0_seq1.mrna1;Target=comp145976_c0_seq1 188 355 .
ChrX	stalkie_big_nohaplotig	CDS	47834424	47834549	.	-	0	Parent=comp145976_c0_seq1.mrna1;Target=comp145976_c0_seq1 356 481 .
ChrX	gffcl	locus	47853321	47854367	.	-	.	ID=RLOC_00002770;geneIDs=comp153165_c0_seq1.path1;transcripts=comp153165_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47853321	47854367	.	-	.	ID=comp153165_c0_seq1.mrna1;geneID=comp153165_c0_seq1.path1;Name=comp153165_c0_seq1;Dir=indeterminatecoverage=99.1;identity=98.9;matches=1035;mismatches=12;indels=0;unknowns=0;Target=comp153165_c0_seq1 1056 10 .;CDS_Target=comp153165_c0_seq1 821 741 .;locus=RLOC_00002770
ChrX	stalkie_big_nohaplotig	exon	47853321	47854367	98	-	.	Parent=comp153165_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47853556	47853636	.	-	0	Parent=comp153165_c0_seq1.mrna1
ChrX	gffcl	locus	47854476	47861264	.	-	.	ID=RLOC_00002771;geneIDs=FBgn0032494.1.path1;transcripts=FBgn0032494.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47854476	47861264	.	-	.	ID=FBgn0032494.1.mrna1;geneID=FBgn0032494.1.path1;Name=FBgn0032494.1;Dir=sensecoverage=100.0;identity=99.6;matches=905;mismatches=4;indels=0;unknowns=0;locus=RLOC_00002771
ChrX	stalkie_big_nohaplotig	exon	47854476	47854627	98	-	.	Parent=FBgn0032494.1.mrna1;Target=FBgn0032494.1 758 909 +
ChrX	stalkie_big_nohaplotig	exon	47857021	47857167	99	-	.	Parent=FBgn0032494.1.mrna1;Target=FBgn0032494.1 611 757 +
ChrX	stalkie_big_nohaplotig	exon	47857238	47857618	100	-	.	Parent=FBgn0032494.1.mrna1;Target=FBgn0032494.1 230 610 +
ChrX	stalkie_big_nohaplotig	exon	47861036	47861264	100	-	.	Parent=FBgn0032494.1.mrna1;Target=FBgn0032494.1 1 229 +
ChrX	stalkie_big_nohaplotig	CDS	47854476	47854627	.	-	2	Parent=FBgn0032494.1.mrna1;Target=FBgn0032494.1 758 909 +
ChrX	stalkie_big_nohaplotig	CDS	47857021	47857167	.	-	2	Parent=FBgn0032494.1.mrna1;Target=FBgn0032494.1 611 757 +
ChrX	stalkie_big_nohaplotig	CDS	47857238	47857618	.	-	2	Parent=FBgn0032494.1.mrna1;Target=FBgn0032494.1 230 610 +
ChrX	stalkie_big_nohaplotig	CDS	47861036	47861264	.	-	0	Parent=FBgn0032494.1.mrna1;Target=FBgn0032494.1 1 229 +
ChrX	gffcl	locus	47865045	47877378	.	-	.	ID=RLOC_00002772;geneIDs=FBgn0027586.1.path1;transcripts=FBgn0027586.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47865045	47877378	.	-	.	ID=FBgn0027586.1.mrna1;geneID=FBgn0027586.1.path1;Name=FBgn0027586.1;Dir=sensecoverage=100.0;identity=99.6;matches=774;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002772
ChrX	stalkie_big_nohaplotig	exon	47865045	47865199	100	-	.	Parent=FBgn0027586.1.mrna1;Target=FBgn0027586.1 623 777 +
ChrX	stalkie_big_nohaplotig	exon	47865903	47866049	97	-	.	Parent=FBgn0027586.1.mrna1;Target=FBgn0027586.1 476 622 +
ChrX	stalkie_big_nohaplotig	exon	47866113	47866490	100	-	.	Parent=FBgn0027586.1.mrna1;Target=FBgn0027586.1 98 475 +
ChrX	stalkie_big_nohaplotig	exon	47877282	47877378	100	-	.	Parent=FBgn0027586.1.mrna1;Target=FBgn0027586.1 1 97 +
ChrX	stalkie_big_nohaplotig	CDS	47865045	47865199	.	-	2	Parent=FBgn0027586.1.mrna1;Target=FBgn0027586.1 623 777 +
ChrX	stalkie_big_nohaplotig	CDS	47865903	47866049	.	-	2	Parent=FBgn0027586.1.mrna1;Target=FBgn0027586.1 476 622 +
ChrX	stalkie_big_nohaplotig	CDS	47866113	47866490	.	-	2	Parent=FBgn0027586.1.mrna1;Target=FBgn0027586.1 98 475 +
ChrX	stalkie_big_nohaplotig	CDS	47877282	47877378	.	-	0	Parent=FBgn0027586.1.mrna1;Target=FBgn0027586.1 1 97 +
ChrX	gffcl	locus	47866807	47867363	.	+	.	ID=RLOC_00002773;geneIDs=comp156554_c0_seq1.path1;transcripts=comp156554_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47866807	47867363	.	+	.	ID=comp156554_c0_seq1.mrna1;geneID=comp156554_c0_seq1.path1;Name=comp156554_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=556;mismatches=1;indels=0;unknowns=0;Target=comp156554_c0_seq1 557 1 .;CDS_Target=comp156554_c0_seq1 534 340 .;locus=RLOC_00002773
ChrX	stalkie_big_nohaplotig	exon	47866807	47867363	99	+	.	Parent=comp156554_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47867146	47867340	.	+	0	Parent=comp156554_c0_seq1.mrna1
ChrX	gffcl	locus	47867723	47868372	.	+	.	ID=RLOC_00002774;geneIDs=comp148371_c0_seq1.path1;transcripts=comp148371_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47867723	47868372	.	+	.	ID=comp148371_c0_seq1.mrna1;geneID=comp148371_c0_seq1.path1;Name=comp148371_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.9;matches=643;mismatches=7;indels=0;unknowns=0;Target=comp148371_c0_seq1 651 2 .;CDS_Target=comp148371_c0_seq1 388 242 .;locus=RLOC_00002774
ChrX	stalkie_big_nohaplotig	exon	47867723	47868372	98	+	.	Parent=comp148371_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47867963	47868109	.	+	0	Parent=comp148371_c0_seq1.mrna1
ChrX	gffcl	locus	47869420	47870114	.	+	.	ID=RLOC_00002775;geneIDs=comp159202_c2_seq1.path1;transcripts=comp159202_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47869420	47870114	.	+	.	ID=comp159202_c2_seq1.mrna1;geneID=comp159202_c2_seq1.path1;Name=comp159202_c2_seq1;Dir=indeterminatecoverage=55.8;identity=94.1;matches=588;mismatches=31;indels=6;unknowns=0;Target=comp159202_c2_seq1 651 579 .;locus=RLOC_00002775
ChrX	stalkie_big_nohaplotig	exon	47869420	47869493	85	+	.	Parent=comp159202_c2_seq1.mrna1;Target=comp159202_c2_seq1 651 578 .
ChrX	stalkie_big_nohaplotig	exon	47869564	47870114	95	+	.	Parent=comp159202_c2_seq1.mrna1;Target=comp159202_c2_seq1 1304 760 .
ChrX	stalkie_big_nohaplotig	CDS	47869421	47869493	.	+	0	Parent=comp159202_c2_seq1.mrna1
ChrX	gffcl	locus	47871961	47872685	.	+	.	ID=RLOC_00002776;geneIDs=comp112373_c0_seq1.path1;transcripts=comp112373_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47871961	47872685	.	+	.	ID=comp112373_c0_seq1.mrna1;geneID=comp112373_c0_seq1.path1;Name=comp112373_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=723;mismatches=2;indels=0;unknowns=0;Target=comp112373_c0_seq1 725 1 .;CDS_Target=comp112373_c0_seq1 108 1 .;locus=RLOC_00002776
ChrX	stalkie_big_nohaplotig	exon	47871961	47872685	99	+	.	Parent=comp112373_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47871961	47872068	.	+	0	Parent=comp112373_c0_seq1.mrna1
ChrX	gffcl	locus	47872745	47873088	.	-	.	ID=RLOC_00002777;geneIDs=comp142773_c0_seq1.path1;transcripts=comp142773_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47872745	47873088	.	-	.	ID=comp142773_c0_seq1.mrna1;geneID=comp142773_c0_seq1.path1;Name=comp142773_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=344;mismatches=0;indels=0;unknowns=0;Target=comp142773_c0_seq1 344 1 .;CDS_Target=comp142773_c0_seq1 215 93 .;locus=RLOC_00002777
ChrX	stalkie_big_nohaplotig	exon	47872745	47873088	100	-	.	Parent=comp142773_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47872874	47872996	.	-	0	Parent=comp142773_c0_seq1.mrna1
ChrX	gffcl	locus	47875859	47876514	.	+	.	ID=RLOC_00002778;geneIDs=comp146020_c0_seq1.path1;transcripts=comp146020_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47875859	47876514	.	+	.	ID=comp146020_c0_seq1.mrna1;geneID=comp146020_c0_seq1.path1;Name=comp146020_c0_seq1;Dir=indeterminatecoverage=99.8;identity=94.3;matches=629;mismatches=18;indels=20;unknowns=0;Target=comp146020_c0_seq1 658 1 .;CDS_Target=comp146020_c0_seq1 364 176 .;locus=RLOC_00002778
ChrX	stalkie_big_nohaplotig	exon	47875859	47876514	94	+	.	Parent=comp146020_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47876023	47876211	.	+	0	Parent=comp146020_c0_seq1.mrna1
ChrX	gffcl	locus	47940253	47941023	.	+	.	ID=RLOC_00002780;geneIDs=FBgn0032487.1.path1;transcripts=FBgn0032487.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47940253	47941023	.	+	.	ID=FBgn0032487.1.mrna1;geneID=FBgn0032487.1.path1;Name=FBgn0032487.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=771;mismatches=0;indels=0;unknowns=0;Target=FBgn0032487.1 771 1 .;locus=RLOC_00002780
ChrX	stalkie_big_nohaplotig	exon	47940253	47941023	100	+	.	Parent=FBgn0032487.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47940253	47941023	.	+	0	Parent=FBgn0032487.1.mrna1
ChrX	gffcl	locus	47941157	47942883	.	-	.	ID=RLOC_00002781;geneIDs=FBgn0032486.1.path1;transcripts=FBgn0032486.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47941157	47942883	.	-	.	ID=FBgn0032486.1.mrna1;geneID=FBgn0032486.1.path1;Name=FBgn0032486.1;Dir=sensecoverage=100.0;identity=100.0;matches=1260;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002781
ChrX	stalkie_big_nohaplotig	exon	47941157	47941797	100	-	.	Parent=FBgn0032486.1.mrna1;Target=FBgn0032486.1 620 1260 +
ChrX	stalkie_big_nohaplotig	exon	47942207	47942432	100	-	.	Parent=FBgn0032486.1.mrna1;Target=FBgn0032486.1 394 619 +
ChrX	stalkie_big_nohaplotig	exon	47942491	47942883	100	-	.	Parent=FBgn0032486.1.mrna1;Target=FBgn0032486.1 1 393 +
ChrX	stalkie_big_nohaplotig	CDS	47941157	47941797	.	-	2	Parent=FBgn0032486.1.mrna1;Target=FBgn0032486.1 620 1260 +
ChrX	stalkie_big_nohaplotig	CDS	47942207	47942432	.	-	0	Parent=FBgn0032486.1.mrna1;Target=FBgn0032486.1 394 619 +
ChrX	stalkie_big_nohaplotig	CDS	47942491	47942883	.	-	0	Parent=FBgn0032486.1.mrna1;Target=FBgn0032486.1 1 393 +
ChrX	gffcl	locus	47950308	47954417	.	+	.	ID=RLOC_00002782;geneIDs=FBgn0032485.1.path1;transcripts=FBgn0032485.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47950308	47954417	.	+	.	ID=FBgn0032485.1.mrna1;geneID=FBgn0032485.1.path1;Name=FBgn0032485.1;Dir=sensecoverage=100.0;identity=100.0;matches=1845;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002782
ChrX	stalkie_big_nohaplotig	exon	47950308	47950727	100	+	.	Parent=FBgn0032485.1.mrna1;Target=FBgn0032485.1 1 420 +
ChrX	stalkie_big_nohaplotig	exon	47950789	47950980	100	+	.	Parent=FBgn0032485.1.mrna1;Target=FBgn0032485.1 421 612 +
ChrX	stalkie_big_nohaplotig	exon	47953027	47953868	100	+	.	Parent=FBgn0032485.1.mrna1;Target=FBgn0032485.1 613 1454 +
ChrX	stalkie_big_nohaplotig	exon	47953928	47954183	100	+	.	Parent=FBgn0032485.1.mrna1;Target=FBgn0032485.1 1455 1710 +
ChrX	stalkie_big_nohaplotig	exon	47954283	47954417	100	+	.	Parent=FBgn0032485.1.mrna1;Target=FBgn0032485.1 1711 1845 +
ChrX	stalkie_big_nohaplotig	CDS	47950308	47950727	.	+	0	Parent=FBgn0032485.1.mrna1;Target=FBgn0032485.1 1 420 +
ChrX	stalkie_big_nohaplotig	CDS	47950789	47950980	.	+	0	Parent=FBgn0032485.1.mrna1;Target=FBgn0032485.1 421 612 +
ChrX	stalkie_big_nohaplotig	CDS	47953027	47953868	.	+	0	Parent=FBgn0032485.1.mrna1;Target=FBgn0032485.1 613 1454 +
ChrX	stalkie_big_nohaplotig	CDS	47953928	47954183	.	+	1	Parent=FBgn0032485.1.mrna1;Target=FBgn0032485.1 1455 1710 +
ChrX	stalkie_big_nohaplotig	CDS	47954283	47954417	.	+	0	Parent=FBgn0032485.1.mrna1;Target=FBgn0032485.1 1711 1845 +
ChrX	gffcl	locus	47954561	47955010	.	+	.	ID=RLOC_00002783;geneIDs=comp142723_c0_seq1.path1;transcripts=comp142723_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47954561	47955010	.	+	.	ID=comp142723_c0_seq1.mrna1;geneID=comp142723_c0_seq1.path1;Name=comp142723_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=449;mismatches=1;indels=0;unknowns=0;Target=comp142723_c0_seq1 450 1 .;CDS_Target=comp142723_c0_seq1 120 1 .;locus=RLOC_00002783
ChrX	stalkie_big_nohaplotig	exon	47954561	47955010	99	+	.	Parent=comp142723_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47954561	47954680	.	+	0	Parent=comp142723_c0_seq1.mrna1
ChrX	gffcl	locus	47955550	47955947	.	-	.	ID=RLOC_00002784;geneIDs=comp148412_c0_seq1.path1;transcripts=comp148412_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47955550	47955947	.	-	.	ID=comp148412_c0_seq1.mrna1;geneID=comp148412_c0_seq1.path1;Name=comp148412_c0_seq1;Dir=indeterminatecoverage=96.4;identity=99.2;matches=395;mismatches=3;indels=0;unknowns=0;Target=comp148412_c0_seq1 400 3 .;CDS_Target=comp148412_c0_seq1 90 4 .;locus=RLOC_00002784
ChrX	stalkie_big_nohaplotig	exon	47955550	47955947	99	-	.	Parent=comp148412_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47955860	47955946	.	-	0	Parent=comp148412_c0_seq1.mrna1
ChrX	gffcl	locus	47956842	47957195	.	+	.	ID=RLOC_00002785;geneIDs=comp136032_c0_seq1.path1;transcripts=comp136032_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47956842	47957195	.	+	.	ID=comp136032_c0_seq1.mrna1;geneID=comp136032_c0_seq1.path1;Name=comp136032_c0_seq1;Dir=indeterminatecoverage=96.7;identity=99.4;matches=352;mismatches=2;indels=0;unknowns=0;Target=comp136032_c0_seq1 366 13 .;CDS_Target=comp136032_c0_seq1 115 14 .;locus=RLOC_00002785
ChrX	stalkie_big_nohaplotig	exon	47956842	47957195	99	+	.	Parent=comp136032_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47956843	47956944	.	+	0	Parent=comp136032_c0_seq1.mrna1
ChrX	gffcl	locus	47957916	47958207	.	-	.	ID=RLOC_00002786;geneIDs=comp143928_c0_seq1.path1;transcripts=comp143928_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47957916	47958207	.	-	.	ID=comp143928_c0_seq1.mrna1;geneID=comp143928_c0_seq1.path1;Name=comp143928_c0_seq1;Dir=indeterminatecoverage=74.9;identity=99.3;matches=290;mismatches=2;indels=0;unknowns=0;Target=comp143928_c0_seq1 292 1 .;CDS_Target=comp143928_c0_seq1 48 1 .;locus=RLOC_00002786
ChrX	stalkie_big_nohaplotig	exon	47957916	47958207	99	-	.	Parent=comp143928_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47958160	47958207	.	-	0	Parent=comp143928_c0_seq1.mrna1
ChrX	gffcl	locus	47960009	47962830	.	-	.	ID=RLOC_00002787;geneIDs=FBgn0032790.1.path1;transcripts=FBgn0032790.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47960009	47962830	.	-	.	ID=FBgn0032790.1.mrna1;geneID=FBgn0032790.1.path1;Name=FBgn0032790.1;Dir=sensecoverage=100.0;identity=100.0;matches=1068;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002787
ChrX	stalkie_big_nohaplotig	exon	47960009	47960407	100	-	.	Parent=FBgn0032790.1.mrna1;Target=FBgn0032790.1 670 1068 +
ChrX	stalkie_big_nohaplotig	exon	47960481	47960562	100	-	.	Parent=FBgn0032790.1.mrna1;Target=FBgn0032790.1 588 669 +
ChrX	stalkie_big_nohaplotig	exon	47962132	47962392	100	-	.	Parent=FBgn0032790.1.mrna1;Target=FBgn0032790.1 327 587 +
ChrX	stalkie_big_nohaplotig	exon	47962452	47962663	100	-	.	Parent=FBgn0032790.1.mrna1;Target=FBgn0032790.1 115 326 +
ChrX	stalkie_big_nohaplotig	exon	47962717	47962830	100	-	.	Parent=FBgn0032790.1.mrna1;Target=FBgn0032790.1 1 114 +
ChrX	stalkie_big_nohaplotig	CDS	47960009	47960407	.	-	0	Parent=FBgn0032790.1.mrna1;Target=FBgn0032790.1 670 1068 +
ChrX	stalkie_big_nohaplotig	CDS	47960481	47960562	.	-	1	Parent=FBgn0032790.1.mrna1;Target=FBgn0032790.1 588 669 +
ChrX	stalkie_big_nohaplotig	CDS	47962132	47962392	.	-	1	Parent=FBgn0032790.1.mrna1;Target=FBgn0032790.1 327 587 +
ChrX	stalkie_big_nohaplotig	CDS	47962452	47962663	.	-	0	Parent=FBgn0032790.1.mrna1;Target=FBgn0032790.1 115 326 +
ChrX	stalkie_big_nohaplotig	CDS	47962717	47962830	.	-	0	Parent=FBgn0032790.1.mrna1;Target=FBgn0032790.1 1 114 +
ChrX	gffcl	locus	47963858	47965608	.	+	.	ID=RLOC_00002788;geneIDs=FBgn0032791.1.path1;transcripts=FBgn0032791.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47963858	47965608	.	+	.	ID=FBgn0032791.1.mrna1;geneID=FBgn0032791.1.path1;Name=FBgn0032791.1;Dir=sensecoverage=100.0;identity=100.0;matches=1071;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002788
ChrX	stalkie_big_nohaplotig	exon	47963858	47963950	100	+	.	Parent=FBgn0032791.1.mrna1;Target=FBgn0032791.1 1 93 +
ChrX	stalkie_big_nohaplotig	exon	47964015	47964496	100	+	.	Parent=FBgn0032791.1.mrna1;Target=FBgn0032791.1 94 575 +
ChrX	stalkie_big_nohaplotig	exon	47964576	47964657	100	+	.	Parent=FBgn0032791.1.mrna1;Target=FBgn0032791.1 576 657 +
ChrX	stalkie_big_nohaplotig	exon	47965130	47965337	100	+	.	Parent=FBgn0032791.1.mrna1;Target=FBgn0032791.1 658 865 +
ChrX	stalkie_big_nohaplotig	exon	47965403	47965608	100	+	.	Parent=FBgn0032791.1.mrna1;Target=FBgn0032791.1 866 1071 +
ChrX	stalkie_big_nohaplotig	CDS	47963858	47963950	.	+	0	Parent=FBgn0032791.1.mrna1;Target=FBgn0032791.1 1 93 +
ChrX	stalkie_big_nohaplotig	CDS	47964015	47964496	.	+	0	Parent=FBgn0032791.1.mrna1;Target=FBgn0032791.1 94 575 +
ChrX	stalkie_big_nohaplotig	CDS	47964576	47964657	.	+	1	Parent=FBgn0032791.1.mrna1;Target=FBgn0032791.1 576 657 +
ChrX	stalkie_big_nohaplotig	CDS	47965130	47965337	.	+	0	Parent=FBgn0032791.1.mrna1;Target=FBgn0032791.1 658 865 +
ChrX	stalkie_big_nohaplotig	CDS	47965403	47965608	.	+	2	Parent=FBgn0032791.1.mrna1;Target=FBgn0032791.1 866 1071 +
ChrX	stalkie_big_nohaplotig	mRNA	48985612	48986015	.	-	.	ID=comp135558_c0_seq1.mrna1;geneID=comp135558_c0_seq1.path1;Name=comp135558_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=402;mismatches=2;indels=0;unknowns=0;Target=comp135558_c0_seq1 404 1 .;CDS_Target=comp135558_c0_seq1 80 3 .;locus=RLOC_00002789
ChrX	stalkie_big_nohaplotig	exon	48985612	48986015	99	-	.	Parent=comp135558_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48985936	48986013	.	-	0	Parent=comp135558_c0_seq1.mrna1
ChrX	gffcl	locus	47989106	47989476	.	+	.	ID=RLOC_00002790;geneIDs=comp188324_c0_seq1.path1;transcripts=comp188324_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47989106	47989476	.	+	.	ID=comp188324_c0_seq1.mrna1;geneID=comp188324_c0_seq1.path1;Name=comp188324_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=371;mismatches=0;indels=2;unknowns=0;Target=comp188324_c0_seq1 373 1 .;CDS_Target=comp188324_c0_seq1 373 245 .;locus=RLOC_00002790
ChrX	stalkie_big_nohaplotig	exon	47989106	47989476	99	+	.	Parent=comp188324_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	47989348	47989476	.	+	0	Parent=comp188324_c0_seq1.mrna1
ChrX	gffcl	locus	47992485	47998437	.	+	.	ID=RLOC_00002791;geneIDs=FBgn0040268.1.path1;transcripts=FBgn0040268.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47992485	47998437	.	+	.	ID=FBgn0040268.1.mrna1;geneID=FBgn0040268.1.path1;Name=FBgn0040268.1;Dir=sensecoverage=100.0;identity=99.9;matches=4125;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002791
ChrX	stalkie_big_nohaplotig	exon	47992485	47992634	100	+	.	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 1 150 +
ChrX	stalkie_big_nohaplotig	exon	47992690	47993323	100	+	.	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 151 784 +
ChrX	stalkie_big_nohaplotig	exon	47993388	47993703	99	+	.	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 785 1100 +
ChrX	stalkie_big_nohaplotig	exon	47993763	47993902	100	+	.	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 1101 1240 +
ChrX	stalkie_big_nohaplotig	exon	47994252	47994467	99	+	.	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 1241 1456 +
ChrX	stalkie_big_nohaplotig	exon	47994538	47994693	100	+	.	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 1457 1612 +
ChrX	stalkie_big_nohaplotig	exon	47994908	47995163	100	+	.	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 1613 1868 +
ChrX	stalkie_big_nohaplotig	exon	47995227	47995924	100	+	.	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 1869 2566 +
ChrX	stalkie_big_nohaplotig	exon	47996639	47997263	100	+	.	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 2567 3191 +
ChrX	stalkie_big_nohaplotig	exon	47997327	47998001	100	+	.	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 3192 3866 +
ChrX	stalkie_big_nohaplotig	exon	47998063	47998163	100	+	.	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 3867 3967 +
ChrX	stalkie_big_nohaplotig	exon	47998219	47998284	100	+	.	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 3968 4033 +
ChrX	stalkie_big_nohaplotig	exon	47998343	47998437	100	+	.	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 4034 4128 +
ChrX	stalkie_big_nohaplotig	CDS	47992485	47992634	.	+	0	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 1 150 +
ChrX	stalkie_big_nohaplotig	CDS	47992690	47993323	.	+	0	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 151 784 +
ChrX	stalkie_big_nohaplotig	CDS	47993388	47993703	.	+	2	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 785 1100 +
ChrX	stalkie_big_nohaplotig	CDS	47993763	47993902	.	+	1	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 1101 1240 +
ChrX	stalkie_big_nohaplotig	CDS	47994252	47994467	.	+	2	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 1241 1456 +
ChrX	stalkie_big_nohaplotig	CDS	47994538	47994693	.	+	2	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 1457 1612 +
ChrX	stalkie_big_nohaplotig	CDS	47994908	47995163	.	+	2	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 1613 1868 +
ChrX	stalkie_big_nohaplotig	CDS	47995227	47995924	.	+	1	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 1869 2566 +
ChrX	stalkie_big_nohaplotig	CDS	47996639	47997263	.	+	2	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 2567 3191 +
ChrX	stalkie_big_nohaplotig	CDS	47997327	47998001	.	+	1	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 3192 3866 +
ChrX	stalkie_big_nohaplotig	CDS	47998063	47998163	.	+	1	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 3867 3967 +
ChrX	stalkie_big_nohaplotig	CDS	47998219	47998284	.	+	2	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 3968 4033 +
ChrX	stalkie_big_nohaplotig	CDS	47998343	47998437	.	+	2	Parent=FBgn0040268.1.mrna1;Target=FBgn0040268.1 4034 4128 +
ChrX	gffcl	locus	47999526	48007884	.	+	.	ID=RLOC_00002792;geneIDs=comp64173_c0_seq1.path1;transcripts=comp64173_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	47999526	48007884	.	+	.	ID=comp64173_c0_seq1.mrna1;geneID=comp64173_c0_seq1.path1;Name=comp64173_c0_seq1;Dir=indeterminatecoverage=99.0;identity=100.0;matches=1277;mismatches=0;indels=0;unknowns=0;Target=comp64173_c0_seq1 119 15 .;locus=RLOC_00002792
ChrX	stalkie_big_nohaplotig	exon	47999526	47999874	100	+	.	Parent=comp64173_c0_seq1.mrna1;Target=comp64173_c0_seq1 362 14 .
ChrX	stalkie_big_nohaplotig	exon	47999947	48000524	100	+	.	Parent=comp64173_c0_seq1.mrna1;Target=comp64173_c0_seq1 940 363 .
ChrX	stalkie_big_nohaplotig	exon	48007535	48007884	100	+	.	Parent=comp64173_c0_seq1.mrna1;Target=comp64173_c0_seq1 1290 941 .
ChrX	stalkie_big_nohaplotig	CDS	47999527	47999631	.	+	0	Parent=comp64173_c0_seq1.mrna1
ChrX	gffcl	locus	48003058	48027725	.	+	.	ID=RLOC_00002793;geneIDs=FBgn0039338.1.path1;transcripts=FBgn0039338.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48003058	48027725	.	+	.	ID=FBgn0039338.1.mrna1;geneID=FBgn0039338.1.path1;Name=FBgn0039338.1;Dir=sensecoverage=99.9;identity=98.9;matches=7195;mismatches=78;indels=0;unknowns=0;locus=RLOC_00002793
ChrX	stalkie_big_nohaplotig	exon	48003058	48003086	100	+	.	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 1 29 +
ChrX	stalkie_big_nohaplotig	exon	48011807	48013320	100	+	.	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 30 1543 +
ChrX	stalkie_big_nohaplotig	exon	48013398	48013560	100	+	.	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 1544 1706 +
ChrX	stalkie_big_nohaplotig	exon	48013631	48013669	100	+	.	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 1707 1745 +
ChrX	stalkie_big_nohaplotig	exon	48013737	48013896	100	+	.	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 1746 1905 +
ChrX	stalkie_big_nohaplotig	exon	48015199	48016131	100	+	.	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 1906 2838 +
ChrX	stalkie_big_nohaplotig	exon	48016210	48016379	100	+	.	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 2839 3008 +
ChrX	stalkie_big_nohaplotig	exon	48016993	48017186	100	+	.	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 3009 3202 +
ChrX	stalkie_big_nohaplotig	exon	48017246	48017383	100	+	.	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 3203 3340 +
ChrX	stalkie_big_nohaplotig	exon	48017450	48017540	100	+	.	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 3341 3431 +
ChrX	stalkie_big_nohaplotig	exon	48018100	48018223	37	+	.	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 3493 3616 +
ChrX	stalkie_big_nohaplotig	exon	48018590	48018651	100	+	.	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 3689 3750 +
ChrX	stalkie_big_nohaplotig	exon	48018722	48018933	100	+	.	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 3751 3962 +
ChrX	stalkie_big_nohaplotig	exon	48019307	48019401	100	+	.	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 3963 4057 +
ChrX	stalkie_big_nohaplotig	exon	48019459	48019766	100	+	.	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 4058 4365 +
ChrX	stalkie_big_nohaplotig	exon	48021931	48022052	100	+	.	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 4366 4487 +
ChrX	stalkie_big_nohaplotig	exon	48022131	48022358	100	+	.	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 4488 4715 +
ChrX	stalkie_big_nohaplotig	exon	48023819	48023870	100	+	.	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 4716 4767 +
ChrX	stalkie_big_nohaplotig	exon	48023953	48026477	100	+	.	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 4768 7292 +
ChrX	stalkie_big_nohaplotig	exon	48027612	48027725	100	+	.	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 7293 7406 +
ChrX	stalkie_big_nohaplotig	CDS	48018806	48018933	.	+	0	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 3835 3962 +
ChrX	stalkie_big_nohaplotig	CDS	48019307	48019401	.	+	1	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 3963 4057 +
ChrX	stalkie_big_nohaplotig	CDS	48019459	48019766	.	+	2	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 4058 4365 +
ChrX	stalkie_big_nohaplotig	CDS	48021931	48022052	.	+	0	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 4366 4487 +
ChrX	stalkie_big_nohaplotig	CDS	48022131	48022358	.	+	1	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 4488 4715 +
ChrX	stalkie_big_nohaplotig	CDS	48023819	48023870	.	+	1	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 4716 4767 +
ChrX	stalkie_big_nohaplotig	CDS	48023953	48026477	.	+	0	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 4768 7292 +
ChrX	stalkie_big_nohaplotig	CDS	48027612	48027723	.	+	1	Parent=FBgn0039338.1.mrna1;Target=FBgn0039338.1 7293 7404 +
ChrX	gffcl	locus	48022392	48023337	.	+	.	ID=RLOC_00002794;geneIDs=comp115801_c0_seq1.path1;transcripts=comp115801_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48022392	48023337	.	+	.	ID=comp115801_c0_seq1.mrna1;geneID=comp115801_c0_seq1.path1;Name=comp115801_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=946;mismatches=0;indels=0;unknowns=0;Target=comp115801_c0_seq1 947 2 .;CDS_Target=comp115801_c0_seq1 339 223 .;locus=RLOC_00002794
ChrX	stalkie_big_nohaplotig	exon	48022392	48023337	100	+	.	Parent=comp115801_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48022613	48022729	.	+	0	Parent=comp115801_c0_seq1.mrna1
ChrX	gffcl	locus	48035878	48041054	.	-	.	ID=RLOC_00002795;geneIDs=FBgn0027780.1.path1;transcripts=FBgn0027780.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48035878	48041054	.	-	.	ID=FBgn0027780.1.mrna1;geneID=FBgn0027780.1.path1;Name=FBgn0027780.1;Dir=sensecoverage=100.0;identity=99.7;matches=3101;mismatches=10;indels=0;unknowns=0;locus=RLOC_00002795
ChrX	stalkie_big_nohaplotig	exon	48035878	48036279	100	-	.	Parent=FBgn0027780.1.mrna1;Target=FBgn0027780.1 2710 3111 +
ChrX	stalkie_big_nohaplotig	exon	48037764	48038027	100	-	.	Parent=FBgn0027780.1.mrna1;Target=FBgn0027780.1 2446 2709 +
ChrX	stalkie_big_nohaplotig	exon	48038373	48039502	99	-	.	Parent=FBgn0027780.1.mrna1;Target=FBgn0027780.1 1316 2445 +
ChrX	stalkie_big_nohaplotig	exon	48039560	48040029	99	-	.	Parent=FBgn0027780.1.mrna1;Target=FBgn0027780.1 846 1315 +
ChrX	stalkie_big_nohaplotig	exon	48040091	48040372	100	-	.	Parent=FBgn0027780.1.mrna1;Target=FBgn0027780.1 564 845 +
ChrX	stalkie_big_nohaplotig	exon	48040433	48040756	99	-	.	Parent=FBgn0027780.1.mrna1;Target=FBgn0027780.1 240 563 +
ChrX	stalkie_big_nohaplotig	exon	48040816	48041054	100	-	.	Parent=FBgn0027780.1.mrna1;Target=FBgn0027780.1 1 239 +
ChrX	stalkie_big_nohaplotig	CDS	48035878	48036279	.	-	0	Parent=FBgn0027780.1.mrna1;Target=FBgn0027780.1 2710 3111 +
ChrX	stalkie_big_nohaplotig	CDS	48037764	48038027	.	-	0	Parent=FBgn0027780.1.mrna1;Target=FBgn0027780.1 2446 2709 +
ChrX	stalkie_big_nohaplotig	CDS	48038373	48039502	.	-	2	Parent=FBgn0027780.1.mrna1;Target=FBgn0027780.1 1316 2445 +
ChrX	stalkie_big_nohaplotig	CDS	48039560	48040029	.	-	1	Parent=FBgn0027780.1.mrna1;Target=FBgn0027780.1 846 1315 +
ChrX	stalkie_big_nohaplotig	CDS	48040091	48040372	.	-	1	Parent=FBgn0027780.1.mrna1;Target=FBgn0027780.1 564 845 +
ChrX	stalkie_big_nohaplotig	CDS	48040433	48040756	.	-	1	Parent=FBgn0027780.1.mrna1;Target=FBgn0027780.1 240 563 +
ChrX	stalkie_big_nohaplotig	CDS	48040816	48041054	.	-	0	Parent=FBgn0027780.1.mrna1;Target=FBgn0027780.1 1 239 +
ChrX	gffcl	locus	48043537	48047839	.	-	.	ID=RLOC_00002796;geneIDs=FBgn0002887.1.path1;transcripts=FBgn0002887.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48043537	48047839	.	-	.	ID=FBgn0002887.1.mrna1;geneID=FBgn0002887.1.path1;Name=FBgn0002887.1;Dir=sensecoverage=100.0;identity=99.9;matches=2728;mismatches=1;indels=1;unknowns=0;Target=FBgn0002887.1 3 47 +;locus=RLOC_00002796
ChrX	stalkie_big_nohaplotig	exon	48043537	48044547	100	-	.	Parent=FBgn0002887.1.mrna1;Target=FBgn0002887.1 1720 2730 +
ChrX	stalkie_big_nohaplotig	exon	48044603	48044844	100	-	.	Parent=FBgn0002887.1.mrna1;Target=FBgn0002887.1 1478 1719 +
ChrX	stalkie_big_nohaplotig	exon	48045220	48045619	100	-	.	Parent=FBgn0002887.1.mrna1;Target=FBgn0002887.1 1078 1477 +
ChrX	stalkie_big_nohaplotig	exon	48045674	48046329	100	-	.	Parent=FBgn0002887.1.mrna1;Target=FBgn0002887.1 422 1077 +
ChrX	stalkie_big_nohaplotig	exon	48046664	48046795	100	-	.	Parent=FBgn0002887.1.mrna1;Target=FBgn0002887.1 290 421 +
ChrX	stalkie_big_nohaplotig	exon	48046853	48046923	98	-	.	Parent=FBgn0002887.1.mrna1;Target=FBgn0002887.1 219 289 +
ChrX	stalkie_big_nohaplotig	exon	48047623	48047839	99	-	.	Parent=FBgn0002887.1.mrna1;Target=FBgn0002887.1 1 218 +
ChrX	stalkie_big_nohaplotig	CDS	48047794	48047837	.	-	0	Parent=FBgn0002887.1.mrna1
ChrX	gffcl	locus	48053852	48055321	.	-	.	ID=RLOC_00002797;geneIDs=FBgn0026718.2.path1;transcripts=FBgn0026718.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48053852	48055321	.	-	.	ID=FBgn0026718.2.mrna1;geneID=FBgn0026718.2.path1;Name=FBgn0026718.2;Dir=sensecoverage=99.3;identity=100.0;matches=822;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002797
ChrX	stalkie_big_nohaplotig	exon	48053852	48054354	100	-	.	Parent=FBgn0026718.2.mrna1;Target=FBgn0026718.2 326 828 +
ChrX	stalkie_big_nohaplotig	exon	48054436	48054569	100	-	.	Parent=FBgn0026718.2.mrna1;Target=FBgn0026718.2 192 325 +
ChrX	stalkie_big_nohaplotig	exon	48055137	48055321	100	-	.	Parent=FBgn0026718.2.mrna1;Target=FBgn0026718.2 7 191 +
ChrX	stalkie_big_nohaplotig	CDS	48053852	48054354	.	-	2	Parent=FBgn0026718.2.mrna1;Target=FBgn0026718.2 326 828 +
ChrX	stalkie_big_nohaplotig	CDS	48054436	48054569	.	-	1	Parent=FBgn0026718.2.mrna1;Target=FBgn0026718.2 192 325 +
ChrX	stalkie_big_nohaplotig	CDS	48055137	48055321	.	-	0	Parent=FBgn0026718.2.mrna1;Target=FBgn0026718.2 7 191 +
ChrX	gffcl	locus	48089412	48089902	.	-	.	ID=RLOC_00002798;geneIDs=comp113094_c0_seq1.path1;transcripts=comp113094_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48089412	48089902	.	-	.	ID=comp113094_c0_seq1.mrna1;geneID=comp113094_c0_seq1.path1;Name=comp113094_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=488;mismatches=3;indels=0;unknowns=0;Target=comp113094_c0_seq1 491 1 .;CDS_Target=comp113094_c0_seq1 52 2 .;locus=RLOC_00002798
ChrX	stalkie_big_nohaplotig	exon	48089412	48089902	99	-	.	Parent=comp113094_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48089851	48089901	.	-	0	Parent=comp113094_c0_seq1.mrna1
ChrX	gffcl	locus	48091497	48092158	.	+	.	ID=RLOC_00002799;geneIDs=comp134736_c0_seq1.path1;transcripts=comp134736_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48091497	48092158	.	+	.	ID=comp134736_c0_seq1.mrna1;geneID=comp134736_c0_seq1.path1;Name=comp134736_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=662;mismatches=0;indels=0;unknowns=0;Target=comp134736_c0_seq1 662 1 .;CDS_Target=comp134736_c0_seq1 550 437 .;locus=RLOC_00002799
ChrX	stalkie_big_nohaplotig	exon	48091497	48092158	100	+	.	Parent=comp134736_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48091933	48092046	.	+	0	Parent=comp134736_c0_seq1.mrna1
ChrX	gffcl	locus	48148822	48150367	.	-	.	ID=RLOC_00002801;geneIDs=comp153711_c1_seq1.path2,comp156320_c0_seq1.path1;transcripts=comp156320_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48148822	48150315	.	-	.	ID=comp156320_c0_seq1.mrna1;geneID=comp156320_c0_seq1.path1;Name=comp156320_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=1136;mismatches=1;indels=4;unknowns=0;Target=comp156320_c0_seq1 767 841 .;locus=RLOC_00002801
ChrX	stalkie_big_nohaplotig	exon	48148822	48149053	100	-	.	Parent=comp156320_c0_seq1.mrna1;Target=comp156320_c0_seq1 1 232 -
ChrX	stalkie_big_nohaplotig	exon	48149115	48149268	99	-	.	Parent=comp156320_c0_seq1.mrna1;Target=comp156320_c0_seq1 233 387 -
ChrX	stalkie_big_nohaplotig	exon	48149371	48149630	100	-	.	Parent=comp156320_c0_seq1.mrna1;Target=comp156320_c0_seq1 388 647 -
ChrX	stalkie_big_nohaplotig	exon	48149685	48149877	99	-	.	Parent=comp156320_c0_seq1.mrna1;Target=comp156320_c0_seq1 648 841 -
ChrX	stalkie_big_nohaplotig	exon	48149944	48150138	98	-	.	Parent=comp156320_c0_seq1.mrna1;Target=comp156320_c0_seq1 842 1038 -
ChrX	stalkie_big_nohaplotig	exon	48150213	48150315	100	-	.	Parent=comp156320_c0_seq1.mrna1;Target=comp156320_c0_seq1 1039 1141 -
ChrX	stalkie_big_nohaplotig	CDS	48149804	48149877	.	-	0	Parent=comp156320_c0_seq1.mrna1
ChrX	gffcl	locus	48151315	48151627	.	-	.	ID=RLOC_00002802;geneIDs=comp1069234_c0_seq1.path1;transcripts=comp1069234_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48151315	48151627	.	-	.	ID=comp1069234_c0_seq1.mrna1;geneID=comp1069234_c0_seq1.path1;Name=comp1069234_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=252;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002802
ChrX	stalkie_big_nohaplotig	exon	48151315	48151412	100	-	.	Parent=comp1069234_c0_seq1.mrna1;Target=comp1069234_c0_seq1 155 252 +
ChrX	stalkie_big_nohaplotig	exon	48151474	48151627	100	-	.	Parent=comp1069234_c0_seq1.mrna1;Target=comp1069234_c0_seq1 1 154 +
ChrX	stalkie_big_nohaplotig	CDS	48151397	48151412	.	-	1	Parent=comp1069234_c0_seq1.mrna1;Target=comp1069234_c0_seq1 155 170 +
ChrX	stalkie_big_nohaplotig	CDS	48151474	48151625	.	-	0	Parent=comp1069234_c0_seq1.mrna1;Target=comp1069234_c0_seq1 3 154 +
ChrX	gffcl	locus	48166379	48167488	.	+	.	ID=RLOC_00002803;geneIDs=comp138910_c0_seq1.path1;transcripts=comp138910_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48166379	48167488	.	+	.	ID=comp138910_c0_seq1.mrna1;geneID=comp138910_c0_seq1.path1;Name=comp138910_c0_seq1;Dir=antisensecoverage=98.6;identity=100.0;matches=566;mismatches=0;indels=0;unknowns=0;Target=comp138910_c0_seq1 346 396 .;locus=RLOC_00002803
ChrX	stalkie_big_nohaplotig	exon	48166379	48166779	100	+	.	Parent=comp138910_c0_seq1.mrna1;Target=comp138910_c0_seq1 174 574 -
ChrX	stalkie_big_nohaplotig	exon	48167324	48167488	100	+	.	Parent=comp138910_c0_seq1.mrna1;Target=comp138910_c0_seq1 9 173 -
ChrX	stalkie_big_nohaplotig	CDS	48166557	48166607	.	+	0	Parent=comp138910_c0_seq1.mrna1
ChrX	gffcl	locus	48232648	48233155	.	-	.	ID=RLOC_00002805;geneIDs=comp135652_c0_seq1.path1;transcripts=comp135652_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48232648	48233155	.	-	.	ID=comp135652_c0_seq1.mrna1;geneID=comp135652_c0_seq1.path1;Name=comp135652_c0_seq1;Dir=indeterminatecoverage=99.8;identity=96.5;matches=498;mismatches=2;indels=16;unknowns=0;Target=comp135652_c0_seq1 509 2 .;CDS_Target=comp135652_c0_seq1 109 2 .;locus=RLOC_00002805
ChrX	stalkie_big_nohaplotig	exon	48232648	48233155	96	-	.	Parent=comp135652_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48233048	48233155	.	-	0	Parent=comp135652_c0_seq1.mrna1
ChrX	gffcl	locus	48233199	48233537	.	+	.	ID=RLOC_00002806;geneIDs=comp64104_c0_seq1.path1;transcripts=comp64104_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48233199	48233537	.	+	.	ID=comp64104_c0_seq1.mrna1;geneID=comp64104_c0_seq1.path1;Name=comp64104_c0_seq1;Dir=indeterminatecoverage=98.5;identity=99.7;matches=338;mismatches=1;indels=0;unknowns=0;Target=comp64104_c0_seq1 344 6 .;CDS_Target=comp64104_c0_seq1 86 6 .;locus=RLOC_00002806
ChrX	stalkie_big_nohaplotig	exon	48233199	48233537	99	+	.	Parent=comp64104_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48233199	48233279	.	+	0	Parent=comp64104_c0_seq1.mrna1
ChrX	gffcl	locus	48234088	48243449	.	-	.	ID=RLOC_00002807;geneIDs=FBgn0032048.1.path1;transcripts=FBgn0032048.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48234088	48243449	.	-	.	ID=FBgn0032048.1.mrna1;geneID=FBgn0032048.1.path1;Name=FBgn0032048.1;Dir=sensecoverage=97.0;identity=99.7;matches=354;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002807
ChrX	stalkie_big_nohaplotig	exon	48234088	48234220	100	-	.	Parent=FBgn0032048.1.mrna1;Target=FBgn0032048.1 234 366 +
ChrX	stalkie_big_nohaplotig	exon	48236985	48237095	100	-	.	Parent=FBgn0032048.1.mrna1;Target=FBgn0032048.1 123 233 +
ChrX	stalkie_big_nohaplotig	exon	48243339	48243449	99	-	.	Parent=FBgn0032048.1.mrna1;Target=FBgn0032048.1 12 122 +
ChrX	stalkie_big_nohaplotig	CDS	48234088	48234220	.	-	1	Parent=FBgn0032048.1.mrna1;Target=FBgn0032048.1 234 366 +
ChrX	stalkie_big_nohaplotig	CDS	48236985	48237095	.	-	1	Parent=FBgn0032048.1.mrna1;Target=FBgn0032048.1 123 233 +
ChrX	stalkie_big_nohaplotig	CDS	48243339	48243448	.	-	0	Parent=FBgn0032048.1.mrna1;Target=FBgn0032048.1 13 122 +
ChrX	gffcl	locus	48275016	48275914	.	+	.	ID=RLOC_00002808;geneIDs=comp115015_c0_seq1.path1;transcripts=comp115015_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48275016	48275914	.	+	.	ID=comp115015_c0_seq1.mrna1;geneID=comp115015_c0_seq1.path1;Name=comp115015_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=899;mismatches=0;indels=0;unknowns=0;Target=comp115015_c0_seq1 900 2 .;CDS_Target=comp115015_c0_seq1 155 3 .;locus=RLOC_00002808
ChrX	stalkie_big_nohaplotig	exon	48275016	48275914	100	+	.	Parent=comp115015_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48275017	48275169	.	+	0	Parent=comp115015_c0_seq1.mrna1
ChrX	gffcl	locus	48347439	48349169	.	+	.	ID=RLOC_00002810;geneIDs=FBgn0032052.1.path1;transcripts=FBgn0032052.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48347439	48349169	.	+	.	ID=FBgn0032052.1.mrna1;geneID=FBgn0032052.1.path1;Name=FBgn0032052.1;Dir=sensecoverage=100.0;identity=100.0;matches=1299;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002810
ChrX	stalkie_big_nohaplotig	exon	48347439	48347589	100	+	.	Parent=FBgn0032052.1.mrna1;Target=FBgn0032052.1 1 151 +
ChrX	stalkie_big_nohaplotig	exon	48347650	48348274	100	+	.	Parent=FBgn0032052.1.mrna1;Target=FBgn0032052.1 152 776 +
ChrX	stalkie_big_nohaplotig	exon	48348338	48348609	100	+	.	Parent=FBgn0032052.1.mrna1;Target=FBgn0032052.1 777 1048 +
ChrX	stalkie_big_nohaplotig	exon	48348844	48348986	100	+	.	Parent=FBgn0032052.1.mrna1;Target=FBgn0032052.1 1049 1191 +
ChrX	stalkie_big_nohaplotig	exon	48349062	48349169	100	+	.	Parent=FBgn0032052.1.mrna1;Target=FBgn0032052.1 1192 1299 +
ChrX	stalkie_big_nohaplotig	CDS	48347439	48347589	.	+	0	Parent=FBgn0032052.1.mrna1;Target=FBgn0032052.1 1 151 +
ChrX	stalkie_big_nohaplotig	CDS	48347650	48348274	.	+	2	Parent=FBgn0032052.1.mrna1;Target=FBgn0032052.1 152 776 +
ChrX	stalkie_big_nohaplotig	CDS	48348338	48348609	.	+	1	Parent=FBgn0032052.1.mrna1;Target=FBgn0032052.1 777 1048 +
ChrX	stalkie_big_nohaplotig	CDS	48348844	48348986	.	+	2	Parent=FBgn0032052.1.mrna1;Target=FBgn0032052.1 1049 1191 +
ChrX	stalkie_big_nohaplotig	CDS	48349062	48349169	.	+	0	Parent=FBgn0032052.1.mrna1;Target=FBgn0032052.1 1192 1299 +
ChrX	gffcl	locus	48352008	48353434	.	-	.	ID=RLOC_00002811;geneIDs=comp158826_c0_seq1.path1;transcripts=comp158826_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48352008	48353434	.	-	.	ID=comp158826_c0_seq1.mrna1;geneID=comp158826_c0_seq1.path1;Name=comp158826_c0_seq1;Dir=indeterminatecoverage=70.9;identity=97.2;matches=1407;mismatches=19;indels=22;unknowns=0;Target=comp158826_c0_seq1 1447 1 .;CDS_Target=comp158826_c0_seq1 201 124 .;locus=RLOC_00002811
ChrX	stalkie_big_nohaplotig	exon	48352008	48353434	97	-	.	Parent=comp158826_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48353236	48353312	.	-	0	Parent=comp158826_c0_seq1.mrna1
ChrX	gffcl	locus	48356756	48358200	.	-	.	ID=RLOC_00002812;geneIDs=comp159859_c0_seq1.path1;transcripts=comp159859_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48356756	48358200	.	-	.	ID=comp159859_c0_seq1.mrna1;geneID=comp159859_c0_seq1.path1;Name=comp159859_c0_seq1;Dir=sensecoverage=98.7;identity=98.0;matches=1257;mismatches=17;indels=9;unknowns=0;Target=comp159859_c0_seq1 407 559 +;locus=RLOC_00002812
ChrX	stalkie_big_nohaplotig	exon	48356756	48357984	97	-	.	Parent=comp159859_c0_seq1.mrna1;Target=comp159859_c0_seq1 46 1283 +
ChrX	stalkie_big_nohaplotig	exon	48358156	48358200	100	-	.	Parent=comp159859_c0_seq1.mrna1;Target=comp159859_c0_seq1 1 45 +
ChrX	stalkie_big_nohaplotig	CDS	48357472	48357624	.	-	0	Parent=comp159859_c0_seq1.mrna1
ChrX	gffcl	locus	48359425	48359914	.	-	.	ID=RLOC_00002813;geneIDs=comp148277_c1_seq1.path1;transcripts=comp148277_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48359425	48359914	.	-	.	ID=comp148277_c1_seq1.mrna1;geneID=comp148277_c1_seq1.path1;Name=comp148277_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=483;mismatches=6;indels=1;unknowns=0;Target=comp148277_c1_seq1 489 1 .;CDS_Target=comp148277_c1_seq1 83 3 .;locus=RLOC_00002813
ChrX	stalkie_big_nohaplotig	exon	48359425	48359914	98	-	.	Parent=comp148277_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48359832	48359912	.	-	0	Parent=comp148277_c1_seq1.mrna1
ChrX	gffcl	locus	48360302	48360844	.	-	.	ID=RLOC_00002814;geneIDs=comp370317_c0_seq1.path1;transcripts=comp370317_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48360302	48360844	.	-	.	ID=comp370317_c0_seq1.mrna1;geneID=comp370317_c0_seq1.path1;Name=comp370317_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=540;mismatches=0;indels=3;unknowns=0;Target=comp370317_c0_seq1 540 1 .;CDS_Target=comp370317_c0_seq1 529 443 .;locus=RLOC_00002814
ChrX	stalkie_big_nohaplotig	exon	48360302	48360844	99	-	.	Parent=comp370317_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48360313	48360399	.	-	0	Parent=comp370317_c0_seq1.mrna1
ChrX	gffcl	locus	48361578	48362603	.	-	.	ID=RLOC_00002815;geneIDs=ORF1685.path1;transcripts=ORF1685.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48361578	48362603	.	-	.	ID=ORF1685.mrna1;geneID=ORF1685.path1;Name=ORF1685;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1026;mismatches=0;indels=0;unknowns=0;Target=ORF1685 1026 1 .;locus=RLOC_00002815
ChrX	stalkie_big_nohaplotig	exon	48361578	48362603	100	-	.	Parent=ORF1685.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48361578	48362603	.	-	0	Parent=ORF1685.mrna1
ChrX	gffcl	locus	48362796	48363071	.	-	.	ID=RLOC_00002816;geneIDs=FBgn0250903.1.path1;transcripts=FBgn0250903.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48362796	48363071	.	-	.	ID=FBgn0250903.1.mrna1;geneID=FBgn0250903.1.path1;Name=FBgn0250903.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=276;mismatches=0;indels=0;unknowns=0;Target=FBgn0250903.1 276 1 .;locus=RLOC_00002816
ChrX	stalkie_big_nohaplotig	exon	48362796	48363071	100	-	.	Parent=FBgn0250903.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48362796	48363071	.	-	0	Parent=FBgn0250903.1.mrna1
ChrX	gffcl	locus	48381489	48381700	.	+	.	ID=RLOC_00002817;geneIDs=comp1301390_c0_seq1.path1;transcripts=comp1301390_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48381489	48381700	.	+	.	ID=comp1301390_c0_seq1.mrna1;geneID=comp1301390_c0_seq1.path1;Name=comp1301390_c0_seq1;Dir=indeterminatecoverage=95.1;identity=100.0;matches=212;mismatches=0;indels=0;unknowns=0;Target=comp1301390_c0_seq1 223 12 .;CDS_Target=comp1301390_c0_seq1 97 14 .;locus=RLOC_00002817
ChrX	stalkie_big_nohaplotig	exon	48381489	48381700	100	+	.	Parent=comp1301390_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48381491	48381574	.	+	0	Parent=comp1301390_c0_seq1.mrna1
ChrX	gffcl	locus	48384953	48412781	.	+	.	ID=RLOC_00002818;geneIDs=comp135329_c0_seq1.path1;transcripts=comp135329_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48384953	48412781	.	+	.	ID=comp135329_c0_seq1.mrna1;geneID=comp135329_c0_seq1.path1;Name=comp135329_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=784;mismatches=0;indels=0;unknowns=0;Target=comp135329_c0_seq1 1 219 +;locus=RLOC_00002818
ChrX	stalkie_big_nohaplotig	exon	48384953	48385239	100	+	.	Parent=comp135329_c0_seq1.mrna1;Target=comp135329_c0_seq1 1 287 +
ChrX	stalkie_big_nohaplotig	exon	48412285	48412781	100	+	.	Parent=comp135329_c0_seq1.mrna1;Target=comp135329_c0_seq1 288 784 +
ChrX	stalkie_big_nohaplotig	CDS	48384953	48385171	.	+	0	Parent=comp135329_c0_seq1.mrna1
ChrX	gffcl	locus	48385401	48385666	.	+	.	ID=RLOC_00002819;geneIDs=comp884289_c0_seq1.path1;transcripts=comp884289_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48385401	48385666	.	+	.	ID=comp884289_c0_seq1.mrna1;geneID=comp884289_c0_seq1.path1;Name=comp884289_c0_seq1;Dir=indeterminatecoverage=99.3;identity=98.1;matches=261;mismatches=5;indels=0;unknowns=0;Target=comp884289_c0_seq1 266 1 .;CDS_Target=comp884289_c0_seq1 168 49 .;locus=RLOC_00002819
ChrX	stalkie_big_nohaplotig	exon	48385401	48385666	98	+	.	Parent=comp884289_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48385449	48385568	.	+	0	Parent=comp884289_c0_seq1.mrna1
ChrX	gffcl	locus	48453934	48454918	.	-	.	ID=RLOC_00002821;geneIDs=comp152501_c1_seq1.path1;transcripts=comp152501_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48453934	48454918	.	-	.	ID=comp152501_c1_seq1.mrna1;geneID=comp152501_c1_seq1.path1;Name=comp152501_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=981;mismatches=4;indels=2;unknowns=0;Target=comp152501_c1_seq1 987 1 .;CDS_Target=comp152501_c1_seq1 661 524 .;locus=RLOC_00002821
ChrX	stalkie_big_nohaplotig	exon	48453934	48454918	99	-	.	Parent=comp152501_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48454259	48454396	.	-	0	Parent=comp152501_c1_seq1.mrna1
ChrX	gffcl	locus	48538731	48954183	.	+	.	ID=RLOC_00002822;geneIDs=FBgn0011259.1.path1,comp158323_c0_seq1.path1;transcripts=comp158323_c0_seq1.mrna1,FBgn0011259.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48538731	48954183	.	+	.	ID=comp158323_c0_seq1.mrna1;geneID=comp158323_c0_seq1.path1;Name=comp158323_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=3330;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002822
ChrX	stalkie_big_nohaplotig	exon	48538731	48539380	100	+	.	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 2684 3333 -
ChrX	stalkie_big_nohaplotig	exon	48750935	48751031	100	+	.	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 2587 2683 -
ChrX	stalkie_big_nohaplotig	exon	48819897	48820005	100	+	.	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 2478 2586 -
ChrX	stalkie_big_nohaplotig	exon	48847352	48847547	100	+	.	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 2282 2477 -
ChrX	stalkie_big_nohaplotig	exon	48896516	48896620	100	+	.	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 2177 2281 -
ChrX	stalkie_big_nohaplotig	exon	48899067	48899155	100	+	.	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 2088 2176 -
ChrX	stalkie_big_nohaplotig	exon	48900755	48900896	100	+	.	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 1946 2087 -
ChrX	stalkie_big_nohaplotig	exon	48903150	48903271	100	+	.	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 1824 1945 -
ChrX	stalkie_big_nohaplotig	exon	48903690	48903770	100	+	.	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 1743 1823 -
ChrX	stalkie_big_nohaplotig	exon	48907513	48907658	100	+	.	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 1597 1742 -
ChrX	stalkie_big_nohaplotig	exon	48928473	48928555	100	+	.	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 1514 1596 -
ChrX	stalkie_big_nohaplotig	exon	48931440	48931583	97	+	.	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 1370 1513 -
ChrX	stalkie_big_nohaplotig	exon	48932670	48932781	100	+	.	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 1258 1369 -
ChrX	stalkie_big_nohaplotig	exon	48933348	48933490	100	+	.	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 1115 1257 -
ChrX	stalkie_big_nohaplotig	exon	48937469	48937600	100	+	.	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 983 1114 -
ChrX	stalkie_big_nohaplotig	exon	48941806	48942013	100	+	.	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 775 982 -
ChrX	stalkie_big_nohaplotig	exon	48942077	48942326	100	+	.	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 525 774 -
ChrX	stalkie_big_nohaplotig	exon	48942416	48942469	100	+	.	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 471 524 -
ChrX	stalkie_big_nohaplotig	exon	48946082	48946144	100	+	.	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 408 470 -
ChrX	stalkie_big_nohaplotig	exon	48951206	48951275	100	+	.	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 338 407 -
ChrX	stalkie_big_nohaplotig	exon	48953847	48954183	100	+	.	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 1 337 -
ChrX	stalkie_big_nohaplotig	CDS	48539206	48539380	.	+	0	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 2684 2858 .
ChrX	stalkie_big_nohaplotig	CDS	48750935	48751031	.	+	2	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 2587 2683 .
ChrX	stalkie_big_nohaplotig	CDS	48819897	48820005	.	+	1	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 2478 2586 .
ChrX	stalkie_big_nohaplotig	CDS	48847352	48847547	.	+	0	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 2282 2477 .
ChrX	stalkie_big_nohaplotig	CDS	48896516	48896620	.	+	2	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 2177 2281 .
ChrX	stalkie_big_nohaplotig	CDS	48899067	48899155	.	+	2	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 2088 2176 .
ChrX	stalkie_big_nohaplotig	CDS	48900755	48900896	.	+	0	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 1946 2087 .
ChrX	stalkie_big_nohaplotig	CDS	48903150	48903271	.	+	2	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 1824 1945 .
ChrX	stalkie_big_nohaplotig	CDS	48903690	48903770	.	+	0	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 1743 1823 .
ChrX	stalkie_big_nohaplotig	CDS	48907513	48907658	.	+	0	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 1597 1742 .
ChrX	stalkie_big_nohaplotig	CDS	48928473	48928555	.	+	1	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 1514 1596 .
ChrX	stalkie_big_nohaplotig	CDS	48931440	48931583	.	+	2	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 1370 1513 .
ChrX	stalkie_big_nohaplotig	CDS	48932670	48932781	.	+	2	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 1258 1369 .
ChrX	stalkie_big_nohaplotig	CDS	48933348	48933490	.	+	1	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 1115 1257 .
ChrX	stalkie_big_nohaplotig	CDS	48937469	48937600	.	+	2	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 983 1114 .
ChrX	stalkie_big_nohaplotig	CDS	48941806	48942013	.	+	2	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 775 982 .
ChrX	stalkie_big_nohaplotig	CDS	48942077	48942326	.	+	1	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 525 774 .
ChrX	stalkie_big_nohaplotig	CDS	48942416	48942469	.	+	0	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 471 524 .
ChrX	stalkie_big_nohaplotig	CDS	48946082	48946093	.	+	0	Parent=comp158323_c0_seq1.mrna1;Target=comp158323_c0_seq1 459 470 .
ChrX	stalkie_big_nohaplotig	mRNA	48539074	48953995	.	+	.	ID=FBgn0011259.1.mrna1;geneID=FBgn0011259.1.path1;Name=FBgn0011259.1;Dir=sensecoverage=100.0;identity=99.9;matches=2736;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002822
ChrX	stalkie_big_nohaplotig	exon	48539074	48539380	100	+	.	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 1 307 +
ChrX	stalkie_big_nohaplotig	exon	48750935	48751031	100	+	.	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 308 404 +
ChrX	stalkie_big_nohaplotig	exon	48819897	48820005	100	+	.	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 405 513 +
ChrX	stalkie_big_nohaplotig	exon	48847352	48847547	100	+	.	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 514 709 +
ChrX	stalkie_big_nohaplotig	exon	48896516	48896620	100	+	.	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 710 814 +
ChrX	stalkie_big_nohaplotig	exon	48899067	48899155	100	+	.	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 815 903 +
ChrX	stalkie_big_nohaplotig	exon	48900755	48900896	100	+	.	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 904 1045 +
ChrX	stalkie_big_nohaplotig	exon	48903150	48903271	100	+	.	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 1046 1167 +
ChrX	stalkie_big_nohaplotig	exon	48903690	48903770	100	+	.	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 1168 1248 +
ChrX	stalkie_big_nohaplotig	exon	48907513	48907658	100	+	.	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 1249 1394 +
ChrX	stalkie_big_nohaplotig	exon	48928473	48928555	100	+	.	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 1395 1477 +
ChrX	stalkie_big_nohaplotig	exon	48931440	48931583	97	+	.	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 1478 1621 +
ChrX	stalkie_big_nohaplotig	exon	48932670	48932781	100	+	.	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 1622 1733 +
ChrX	stalkie_big_nohaplotig	exon	48933348	48933490	100	+	.	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 1734 1876 +
ChrX	stalkie_big_nohaplotig	exon	48937469	48937600	100	+	.	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 1877 2008 +
ChrX	stalkie_big_nohaplotig	exon	48941806	48942013	100	+	.	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 2009 2216 +
ChrX	stalkie_big_nohaplotig	exon	48942077	48942326	100	+	.	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 2217 2466 +
ChrX	stalkie_big_nohaplotig	exon	48942416	48942469	100	+	.	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 2467 2520 +
ChrX	stalkie_big_nohaplotig	exon	48951206	48951275	100	+	.	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 2521 2590 +
ChrX	stalkie_big_nohaplotig	exon	48953847	48953995	100	+	.	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 2591 2739 +
ChrX	stalkie_big_nohaplotig	CDS	48539074	48539380	.	+	0	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 1 307 +
ChrX	stalkie_big_nohaplotig	CDS	48750935	48751031	.	+	2	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 308 404 +
ChrX	stalkie_big_nohaplotig	CDS	48819897	48820005	.	+	1	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 405 513 +
ChrX	stalkie_big_nohaplotig	CDS	48847352	48847547	.	+	0	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 514 709 +
ChrX	stalkie_big_nohaplotig	CDS	48896516	48896620	.	+	2	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 710 814 +
ChrX	stalkie_big_nohaplotig	CDS	48899067	48899155	.	+	2	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 815 903 +
ChrX	stalkie_big_nohaplotig	CDS	48900755	48900896	.	+	0	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 904 1045 +
ChrX	stalkie_big_nohaplotig	CDS	48903150	48903271	.	+	2	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 1046 1167 +
ChrX	stalkie_big_nohaplotig	CDS	48903690	48903770	.	+	0	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 1168 1248 +
ChrX	stalkie_big_nohaplotig	CDS	48907513	48907658	.	+	0	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 1249 1394 +
ChrX	stalkie_big_nohaplotig	CDS	48928473	48928555	.	+	1	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 1395 1477 +
ChrX	stalkie_big_nohaplotig	CDS	48931440	48931583	.	+	2	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 1478 1621 +
ChrX	stalkie_big_nohaplotig	CDS	48932670	48932781	.	+	2	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 1622 1733 +
ChrX	stalkie_big_nohaplotig	CDS	48933348	48933490	.	+	1	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 1734 1876 +
ChrX	stalkie_big_nohaplotig	CDS	48937469	48937600	.	+	2	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 1877 2008 +
ChrX	stalkie_big_nohaplotig	CDS	48941806	48942013	.	+	2	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 2009 2216 +
ChrX	stalkie_big_nohaplotig	CDS	48942077	48942326	.	+	1	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 2217 2466 +
ChrX	stalkie_big_nohaplotig	CDS	48942416	48942469	.	+	0	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 2467 2520 +
ChrX	stalkie_big_nohaplotig	CDS	48951206	48951275	.	+	0	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 2521 2590 +
ChrX	stalkie_big_nohaplotig	CDS	48953847	48953995	.	+	2	Parent=FBgn0011259.1.mrna1;Target=FBgn0011259.1 2591 2739 +
ChrX	gffcl	locus	48684107	48684751	.	-	.	ID=RLOC_00002823;geneIDs=comp142416_c1_seq1.path1;transcripts=comp142416_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48684107	48684751	.	-	.	ID=comp142416_c1_seq1.mrna1;geneID=comp142416_c1_seq1.path1;Name=comp142416_c1_seq1;Dir=indeterminatecoverage=99.7;identity=97.8;matches=631;mismatches=6;indels=8;unknowns=0;Target=comp142416_c1_seq1 638 2 .;CDS_Target=comp142416_c1_seq1 308 99 .;locus=RLOC_00002823
ChrX	stalkie_big_nohaplotig	exon	48684107	48684751	97	-	.	Parent=comp142416_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48684445	48684654	.	-	0	Parent=comp142416_c1_seq1.mrna1
ChrX	gffcl	locus	48704785	48714273	.	-	.	ID=RLOC_00002824;geneIDs=FBgn0002564.1.path1;transcripts=FBgn0002564.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48704785	48714273	.	-	.	ID=FBgn0002564.1.mrna1;geneID=FBgn0002564.1.path1;Name=FBgn0002564.1;Dir=sensecoverage=100.0;identity=87.9;matches=1979;mismatches=273;indels=0;unknowns=0;Target=FBgn0002564.1 660 692 +;locus=RLOC_00002824
ChrX	stalkie_big_nohaplotig	exon	48704785	48706323	89	-	.	Parent=FBgn0002564.1.mrna1;Target=FBgn0002564.1 787 2325 +
ChrX	stalkie_big_nohaplotig	exon	48709295	48709298	100	-	.	Parent=FBgn0002564.1.mrna1;Target=FBgn0002564.1 783 786 +
ChrX	stalkie_big_nohaplotig	exon	48711796	48711799	100	-	.	Parent=FBgn0002564.1.mrna1;Target=FBgn0002564.1 779 782 +
ChrX	stalkie_big_nohaplotig	exon	48713478	48713968	84	-	.	Parent=FBgn0002564.1.mrna1;Target=FBgn0002564.1 214 704 +
ChrX	stalkie_big_nohaplotig	exon	48714061	48714273	81	-	.	Parent=FBgn0002564.1.mrna1;Target=FBgn0002564.1 1 213 +
ChrX	stalkie_big_nohaplotig	CDS	48713490	48713522	.	-	0	Parent=FBgn0002564.1.mrna1
ChrX	gffcl	locus	48718611	48718876	.	-	.	ID=RLOC_00002825;geneIDs=comp235907_c0_seq1.path1;transcripts=comp235907_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48718611	48718876	.	-	.	ID=comp235907_c0_seq1.mrna1;geneID=comp235907_c0_seq1.path1;Name=comp235907_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.6;matches=265;mismatches=0;indels=1;unknowns=0;Target=comp235907_c0_seq1 265 1 .;CDS_Target=comp235907_c0_seq1 41 3 .;locus=RLOC_00002825
ChrX	stalkie_big_nohaplotig	exon	48718611	48718876	99	-	.	Parent=comp235907_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48718835	48718874	.	-	0	Parent=comp235907_c0_seq1.mrna1
ChrX	gffcl	locus	48811477	48812465	.	+	.	ID=RLOC_00002826;geneIDs=comp153117_c1_seq1.path1;transcripts=comp153117_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48811477	48812465	.	+	.	ID=comp153117_c1_seq1.mrna1;geneID=comp153117_c1_seq1.path1;Name=comp153117_c1_seq1;Dir=sensecoverage=100.0;identity=98.2;matches=909;mismatches=8;indels=9;unknowns=0;locus=RLOC_00002826
ChrX	stalkie_big_nohaplotig	exon	48811477	48811926	100	+	.	Parent=comp153117_c1_seq1.mrna1;Target=comp153117_c1_seq1 1 450 +
ChrX	stalkie_big_nohaplotig	exon	48811990	48812465	96	+	.	Parent=comp153117_c1_seq1.mrna1;Target=comp153117_c1_seq1 451 917 +
ChrX	stalkie_big_nohaplotig	CDS	48811752	48811926	.	+	0	Parent=comp153117_c1_seq1.mrna1;Target=comp153117_c1_seq1 276 450 +
ChrX	stalkie_big_nohaplotig	CDS	48811990	48812012	.	+	2	Parent=comp153117_c1_seq1.mrna1;Target=comp153117_c1_seq1 451 473 +
ChrX	gffcl	locus	48812640	48813255	.	-	.	ID=RLOC_00002827;geneIDs=comp162376_c1_seq1.path1;transcripts=comp162376_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48812640	48813255	.	-	.	ID=comp162376_c1_seq1.mrna1;geneID=comp162376_c1_seq1.path1;Name=comp162376_c1_seq1;Dir=indeterminatecoverage=96.1;identity=98.9;matches=611;mismatches=5;indels=2;unknowns=0;Target=comp162376_c1_seq1 643 26 .;CDS_Target=comp162376_c1_seq1 41 27 .;locus=RLOC_00002827
ChrX	stalkie_big_nohaplotig	exon	48812640	48813255	98	-	.	Parent=comp162376_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48813242	48813254	.	-	0	Parent=comp162376_c1_seq1.mrna1
ChrX	gffcl	locus	48816128	48817180	.	-	.	ID=RLOC_00002828;geneIDs=FBgn0015268.4.path1;transcripts=FBgn0015268.4.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48816128	48817180	.	-	.	ID=FBgn0015268.4.mrna1;geneID=FBgn0015268.4.path1;Name=FBgn0015268.4;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1051;mismatches=2;indels=0;unknowns=0;Target=FBgn0015268.4 1053 1 .;locus=RLOC_00002828
ChrX	stalkie_big_nohaplotig	exon	48816128	48817180	99	-	.	Parent=FBgn0015268.4.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48816128	48817180	.	-	0	Parent=FBgn0015268.4.mrna1
ChrX	gffcl	locus	48825211	48826315	.	-	.	ID=RLOC_00002829;geneIDs=FBgn0032030.2.path1;transcripts=FBgn0032030.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48825211	48826315	.	-	.	ID=FBgn0032030.2.mrna1;geneID=FBgn0032030.2.path1;Name=FBgn0032030.2;Dir=sensecoverage=100.0;identity=99.9;matches=1052;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002829
ChrX	stalkie_big_nohaplotig	exon	48825211	48826173	99	-	.	Parent=FBgn0032030.2.mrna1;Target=FBgn0032030.2 91 1053 +
ChrX	stalkie_big_nohaplotig	exon	48826226	48826315	100	-	.	Parent=FBgn0032030.2.mrna1;Target=FBgn0032030.2 1 90 +
ChrX	stalkie_big_nohaplotig	CDS	48825211	48826173	.	-	0	Parent=FBgn0032030.2.mrna1;Target=FBgn0032030.2 91 1053 +
ChrX	stalkie_big_nohaplotig	CDS	48826226	48826315	.	-	0	Parent=FBgn0032030.2.mrna1;Target=FBgn0032030.2 1 90 +
ChrX	gffcl	locus	48860147	49109409	.	.	.	ID=RLOC_00002830;geneIDs=comp115667_c0_seq1.path1,comp118270_c0_seq1.path1,comp118484_c0_seq1.path1,comp149118_c0_seq1.path1;transcripts=comp149118_c0_seq1.mrna1,comp118484_c0_seq1.mrna1,comp115667_c0_seq1.mrna1,comp118270_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48860147	49109409	.	+	.	ID=comp149118_c0_seq1.mrna1;geneID=comp149118_c0_seq1.path1;Name=comp149118_c0_seq1;Dir=indeterminatecoverage=95.9;identity=90.1;matches=1046;mismatches=48;indels=67;unknowns=0;Target=comp149118_c0_seq1 859 737 .;locus=RLOC_00002830
ChrX	stalkie_big_nohaplotig	exon	48860147	48860152	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 51 46 .
ChrX	stalkie_big_nohaplotig	exon	48864239	48864246	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 59 52 .
ChrX	stalkie_big_nohaplotig	exon	48895745	48895750	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 65 60 .
ChrX	stalkie_big_nohaplotig	exon	48901406	48901409	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 69 66 .
ChrX	stalkie_big_nohaplotig	exon	48904563	48904565	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 72 70 .
ChrX	stalkie_big_nohaplotig	exon	48905801	48905802	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 74 73 .
ChrX	stalkie_big_nohaplotig	exon	48907040	48907044	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 79 75 .
ChrX	stalkie_big_nohaplotig	exon	48911882	48911887	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 85 80 .
ChrX	stalkie_big_nohaplotig	exon	48933787	48933808	81	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 106 86 .
ChrX	stalkie_big_nohaplotig	exon	48949236	48949244	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 115 107 .
ChrX	stalkie_big_nohaplotig	exon	48951360	48951361	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 120 119 .
ChrX	stalkie_big_nohaplotig	exon	48955173	48955180	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 128 121 .
ChrX	stalkie_big_nohaplotig	exon	48955213	48955218	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 159 154 .
ChrX	stalkie_big_nohaplotig	exon	48957128	48957137	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 169 160 .
ChrX	stalkie_big_nohaplotig	exon	48974079	48974102	39	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 199 172 .
ChrX	stalkie_big_nohaplotig	exon	48976494	48976510	44	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 233 200 .
ChrX	stalkie_big_nohaplotig	exon	48981853	48981854	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 235 234 .
ChrX	stalkie_big_nohaplotig	exon	48984099	48984114	93	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 251 236 .
ChrX	stalkie_big_nohaplotig	exon	48984352	48984370	78	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 269 252 .
ChrX	stalkie_big_nohaplotig	exon	48985230	48985232	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 272 270 .
ChrX	stalkie_big_nohaplotig	exon	48987205	48987212	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 280 273 .
ChrX	stalkie_big_nohaplotig	exon	48987279	48987287	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 289 281 .
ChrX	stalkie_big_nohaplotig	exon	48994922	48994985	39	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 318 290 .
ChrX	stalkie_big_nohaplotig	exon	49002672	49002678	85	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 325 319 .
ChrX	stalkie_big_nohaplotig	exon	49010825	49010838	85	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 339 326 .
ChrX	stalkie_big_nohaplotig	exon	49016440	49016463	62	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 362 340 .
ChrX	stalkie_big_nohaplotig	exon	49019626	49019630	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 367 363 .
ChrX	stalkie_big_nohaplotig	exon	49026507	49026512	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 373 368 .
ChrX	stalkie_big_nohaplotig	exon	49028936	49028964	61	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 407 374 .
ChrX	stalkie_big_nohaplotig	exon	49048341	49048358	83	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 500 484 .
ChrX	stalkie_big_nohaplotig	exon	49051780	49051785	83	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 506 501 .
ChrX	stalkie_big_nohaplotig	exon	49052032	49052034	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 509 507 .
ChrX	stalkie_big_nohaplotig	exon	49066017	49066024	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 517 510 .
ChrX	stalkie_big_nohaplotig	exon	49067551	49067552	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 519 518 .
ChrX	stalkie_big_nohaplotig	exon	49068742	49068743	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 521 520 .
ChrX	stalkie_big_nohaplotig	exon	49072373	49072380	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 529 522 .
ChrX	stalkie_big_nohaplotig	exon	49078711	49078712	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 531 530 .
ChrX	stalkie_big_nohaplotig	exon	49092233	49092236	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 535 532 .
ChrX	stalkie_big_nohaplotig	exon	49093177	49093178	100	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 537 536 .
ChrX	stalkie_big_nohaplotig	exon	49108675	49109409	99	+	.	Parent=comp149118_c0_seq1.mrna1;Target=comp149118_c0_seq1 1270 538 .
ChrX	stalkie_big_nohaplotig	CDS	49108874	49108996	.	+	0	Parent=comp149118_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48976462	48976951	.	+	.	ID=comp118484_c0_seq1.mrna1;geneID=comp118484_c0_seq1.path1;Name=comp118484_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=490;mismatches=0;indels=0;unknowns=0;Target=comp118484_c0_seq1 490 1 .;CDS_Target=comp118484_c0_seq1 173 54 .;locus=RLOC_00002830
ChrX	stalkie_big_nohaplotig	exon	48976462	48976951	100	+	.	Parent=comp118484_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48976515	48976634	.	+	0	Parent=comp118484_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48981761	48982211	.	-	.	ID=comp115667_c0_seq1.mrna1;geneID=comp115667_c0_seq1.path1;Name=comp115667_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=450;mismatches=1;indels=0;unknowns=0;Target=comp115667_c0_seq1 451 1 .;CDS_Target=comp115667_c0_seq1 152 3 .;locus=RLOC_00002830
ChrX	stalkie_big_nohaplotig	exon	48981761	48982211	99	-	.	Parent=comp115667_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48982060	48982209	.	-	0	Parent=comp115667_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49108263	49108684	.	-	.	ID=comp118270_c0_seq1.mrna1;geneID=comp118270_c0_seq1.path1;Name=comp118270_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=422;mismatches=0;indels=0;unknowns=0;Target=comp118270_c0_seq1 422 1 .;CDS_Target=comp118270_c0_seq1 342 265 .;locus=RLOC_00002830
ChrX	stalkie_big_nohaplotig	exon	49108263	49108684	100	-	.	Parent=comp118270_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49108343	49108420	.	-	0	Parent=comp118270_c0_seq1.mrna1
ChrX	gffcl	locus	48959540	48960733	.	+	.	ID=RLOC_00002831;geneIDs=comp154138_c0_seq1.path1;transcripts=comp154138_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48959540	48960733	.	+	.	ID=comp154138_c0_seq1.mrna1;geneID=comp154138_c0_seq1.path1;Name=comp154138_c0_seq1;Dir=indeterminatecoverage=96.1;identity=99.3;matches=1186;mismatches=8;indels=0;unknowns=0;Target=comp154138_c0_seq1 1243 50 .;CDS_Target=comp154138_c0_seq1 785 669 .;locus=RLOC_00002831
ChrX	stalkie_big_nohaplotig	exon	48959540	48960733	99	+	.	Parent=comp154138_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48960159	48960275	.	+	0	Parent=comp154138_c0_seq1.mrna1
ChrX	gffcl	locus	48962982	48963461	.	+	.	ID=RLOC_00002832;geneIDs=comp155502_c0_seq1.path1;transcripts=comp155502_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48962982	48963461	.	+	.	ID=comp155502_c0_seq1.mrna1;geneID=comp155502_c0_seq1.path1;Name=comp155502_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=474;mismatches=6;indels=9;unknowns=0;Target=comp155502_c0_seq1 489 1 .;CDS_Target=comp155502_c0_seq1 488 405 .;locus=RLOC_00002832
ChrX	stalkie_big_nohaplotig	exon	48962982	48963461	96	+	.	Parent=comp155502_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48963377	48963460	.	+	0	Parent=comp155502_c0_seq1.mrna1
ChrX	gffcl	locus	48969343	48970010	.	+	.	ID=RLOC_00002833;geneIDs=comp152349_c0_seq1.path1;transcripts=comp152349_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48969343	48970010	.	+	.	ID=comp152349_c0_seq1.mrna1;geneID=comp152349_c0_seq1.path1;Name=comp152349_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=665;mismatches=3;indels=0;unknowns=0;Target=comp152349_c0_seq1 668 1 .;CDS_Target=comp152349_c0_seq1 395 306 .;locus=RLOC_00002833
ChrX	stalkie_big_nohaplotig	exon	48969343	48970010	99	+	.	Parent=comp152349_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48969648	48969737	.	+	0	Parent=comp152349_c0_seq1.mrna1
ChrX	gffcl	locus	48971033	48971869	.	+	.	ID=RLOC_00002834;geneIDs=comp161378_c0_seq1.path1;transcripts=comp161378_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48971033	48971869	.	+	.	ID=comp161378_c0_seq1.mrna1;geneID=comp161378_c0_seq1.path1;Name=comp161378_c0_seq1;Dir=indeterminatecoverage=99.5;identity=97.9;matches=800;mismatches=15;indels=2;unknowns=0;Target=comp161378_c0_seq1 113 6 .;locus=RLOC_00002834
ChrX	stalkie_big_nohaplotig	exon	48971033	48971760	97	+	.	Parent=comp161378_c0_seq1.mrna1;Target=comp161378_c0_seq1 733 5 .
ChrX	stalkie_big_nohaplotig	exon	48971782	48971869	98	+	.	Parent=comp161378_c0_seq1.mrna1;Target=comp161378_c0_seq1 831 745 .
ChrX	stalkie_big_nohaplotig	CDS	48971034	48971141	.	+	0	Parent=comp161378_c0_seq1.mrna1
ChrX	gffcl	locus	48972009	48972930	.	-	.	ID=RLOC_00002835;geneIDs=comp153529_c0_seq1.path1;transcripts=comp153529_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48972009	48972930	.	-	.	ID=comp153529_c0_seq1.mrna1;geneID=comp153529_c0_seq1.path1;Name=comp153529_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.0;matches=914;mismatches=8;indels=1;unknowns=0;Target=comp153529_c0_seq1 923 1 .;CDS_Target=comp153529_c0_seq1 74 3 .;locus=RLOC_00002835
ChrX	stalkie_big_nohaplotig	exon	48972009	48972930	99	-	.	Parent=comp153529_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48972857	48972928	.	-	0	Parent=comp153529_c0_seq1.mrna1
ChrX	gffcl	locus	48977340	48977669	.	-	.	ID=RLOC_00002836;geneIDs=comp105210_c0_seq1.path1;transcripts=comp105210_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48977340	48977669	.	-	.	ID=comp105210_c0_seq1.mrna1;geneID=comp105210_c0_seq1.path1;Name=comp105210_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.4;matches=325;mismatches=5;indels=7;unknowns=0;Target=comp105210_c0_seq1 337 1 .;CDS_Target=comp105210_c0_seq1 295 239 .;locus=RLOC_00002836
ChrX	stalkie_big_nohaplotig	exon	48977340	48977669	96	-	.	Parent=comp105210_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48977382	48977438	.	-	0	Parent=comp105210_c0_seq1.mrna1
ChrX	gffcl	locus	48977726	48978021	.	+	.	ID=RLOC_00002837;geneIDs=comp99356_c0_seq1.path1;transcripts=comp99356_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48977726	48978021	.	+	.	ID=comp99356_c0_seq1.mrna1;geneID=comp99356_c0_seq1.path1;Name=comp99356_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=296;mismatches=0;indels=0;unknowns=0;Target=comp99356_c0_seq1 296 1 .;CDS_Target=comp99356_c0_seq1 45 1 .;locus=RLOC_00002837
ChrX	stalkie_big_nohaplotig	exon	48977726	48978021	100	+	.	Parent=comp99356_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48977726	48977770	.	+	0	Parent=comp99356_c0_seq1.mrna1
ChrX	gffcl	locus	48978125	48978682	.	+	.	ID=RLOC_00002838;geneIDs=comp152204_c0_seq1.path1;transcripts=comp152204_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48978125	48978682	.	+	.	ID=comp152204_c0_seq1.mrna1;geneID=comp152204_c0_seq1.path1;Name=comp152204_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=548;mismatches=10;indels=6;unknowns=0;Target=comp152204_c0_seq1 564 1 .;CDS_Target=comp152204_c0_seq1 356 102 .;locus=RLOC_00002838
ChrX	stalkie_big_nohaplotig	exon	48978125	48978682	97	+	.	Parent=comp152204_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	48978226	48978474	.	+	0	Parent=comp152204_c0_seq1.mrna1
ChrX	gffcl	locus	48985994	49020618	.	-	.	ID=RLOC_00002839;geneIDs=comp143791_c0_seq1.path1;transcripts=comp143791_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48985994	49020618	.	-	.	ID=comp143791_c0_seq1.mrna1;geneID=comp143791_c0_seq1.path1;Name=comp143791_c0_seq1;Dir=indeterminatecoverage=61.0;identity=96.4;matches=320;mismatches=3;indels=9;unknowns=0;Target=comp143791_c0_seq1 347 288 .;locus=RLOC_00002839
ChrX	stalkie_big_nohaplotig	exon	48985994	48986272	99	-	.	Parent=comp143791_c0_seq1.mrna1;Target=comp143791_c0_seq1 544 264 .
ChrX	stalkie_big_nohaplotig	exon	49001700	49001705	100	-	.	Parent=comp143791_c0_seq1.mrna1;Target=comp143791_c0_seq1 263 258 .
ChrX	stalkie_big_nohaplotig	exon	49005157	49005158	100	-	.	Parent=comp143791_c0_seq1.mrna1;Target=comp143791_c0_seq1 257 256 .
ChrX	stalkie_big_nohaplotig	exon	49009751	49009759	100	-	.	Parent=comp143791_c0_seq1.mrna1;Target=comp143791_c0_seq1 255 247 .
ChrX	stalkie_big_nohaplotig	exon	49013232	49013250	61	-	.	Parent=comp143791_c0_seq1.mrna1;Target=comp143791_c0_seq1 246 221 .
ChrX	stalkie_big_nohaplotig	exon	49018009	49018012	100	-	.	Parent=comp143791_c0_seq1.mrna1;Target=comp143791_c0_seq1 220 217 .
ChrX	stalkie_big_nohaplotig	exon	49020615	49020618	100	-	.	Parent=comp143791_c0_seq1.mrna1;Target=comp143791_c0_seq1 216 213 .
ChrX	stalkie_big_nohaplotig	CDS	48986189	48986248	.	-	0	Parent=comp143791_c0_seq1.mrna1
ChrX	gffcl	locus	48987460	49020195	.	-	.	ID=RLOC_00002840;geneIDs=FBgn0086779.1.path1;transcripts=FBgn0086779.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	48987460	49020195	.	-	.	ID=FBgn0086779.1.mrna1;geneID=FBgn0086779.1.path1;Name=FBgn0086779.1;Dir=sensecoverage=100.0;identity=100.0;matches=2379;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002840
ChrX	stalkie_big_nohaplotig	exon	48987460	48987609	100	-	.	Parent=FBgn0086779.1.mrna1;Target=FBgn0086779.1 2230 2379 +
ChrX	stalkie_big_nohaplotig	exon	48987666	48987767	100	-	.	Parent=FBgn0086779.1.mrna1;Target=FBgn0086779.1 2128 2229 +
ChrX	stalkie_big_nohaplotig	exon	48987835	48987946	100	-	.	Parent=FBgn0086779.1.mrna1;Target=FBgn0086779.1 2016 2127 +
ChrX	stalkie_big_nohaplotig	exon	48988951	48989156	100	-	.	Parent=FBgn0086779.1.mrna1;Target=FBgn0086779.1 1810 2015 +
ChrX	stalkie_big_nohaplotig	exon	48994196	48994370	100	-	.	Parent=FBgn0086779.1.mrna1;Target=FBgn0086779.1 1635 1809 +
ChrX	stalkie_big_nohaplotig	exon	48994425	48994524	100	-	.	Parent=FBgn0086779.1.mrna1;Target=FBgn0086779.1 1535 1634 +
ChrX	stalkie_big_nohaplotig	exon	48994732	48994830	100	-	.	Parent=FBgn0086779.1.mrna1;Target=FBgn0086779.1 1436 1534 +
ChrX	stalkie_big_nohaplotig	exon	49010911	49011043	100	-	.	Parent=FBgn0086779.1.mrna1;Target=FBgn0086779.1 1303 1435 +
ChrX	stalkie_big_nohaplotig	exon	49018894	49020195	100	-	.	Parent=FBgn0086779.1.mrna1;Target=FBgn0086779.1 1 1302 +
ChrX	stalkie_big_nohaplotig	CDS	48987460	48987609	.	-	0	Parent=FBgn0086779.1.mrna1;Target=FBgn0086779.1 2230 2379 +
ChrX	stalkie_big_nohaplotig	CDS	48987666	48987767	.	-	0	Parent=FBgn0086779.1.mrna1;Target=FBgn0086779.1 2128 2229 +
ChrX	stalkie_big_nohaplotig	CDS	48987835	48987946	.	-	1	Parent=FBgn0086779.1.mrna1;Target=FBgn0086779.1 2016 2127 +
ChrX	stalkie_big_nohaplotig	CDS	48988951	48989156	.	-	0	Parent=FBgn0086779.1.mrna1;Target=FBgn0086779.1 1810 2015 +
ChrX	stalkie_big_nohaplotig	CDS	48994196	48994370	.	-	1	Parent=FBgn0086779.1.mrna1;Target=FBgn0086779.1 1635 1809 +
ChrX	stalkie_big_nohaplotig	CDS	48994425	48994524	.	-	2	Parent=FBgn0086779.1.mrna1;Target=FBgn0086779.1 1535 1634 +
ChrX	stalkie_big_nohaplotig	CDS	48994732	48994830	.	-	2	Parent=FBgn0086779.1.mrna1;Target=FBgn0086779.1 1436 1534 +
ChrX	stalkie_big_nohaplotig	CDS	49010911	49011043	.	-	0	Parent=FBgn0086779.1.mrna1;Target=FBgn0086779.1 1303 1435 +
ChrX	stalkie_big_nohaplotig	CDS	49018894	49020195	.	-	0	Parent=FBgn0086779.1.mrna1;Target=FBgn0086779.1 1 1302 +
ChrX	gffcl	locus	49081643	49082024	.	+	.	ID=RLOC_00002841;geneIDs=comp74518_c0_seq1.path1;transcripts=comp74518_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49081643	49082024	.	+	.	ID=comp74518_c0_seq1.mrna1;geneID=comp74518_c0_seq1.path1;Name=comp74518_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=381;mismatches=0;indels=2;unknowns=0;Target=comp74518_c0_seq1 382 1 .;CDS_Target=comp74518_c0_seq1 382 260 .;locus=RLOC_00002841
ChrX	stalkie_big_nohaplotig	exon	49081643	49082024	99	+	.	Parent=comp74518_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49081902	49082024	.	+	0	Parent=comp74518_c0_seq1.mrna1
ChrX	gffcl	locus	49101475	49103582	.	+	.	ID=RLOC_00002842;geneIDs=comp162582_c0_seq1.path1;transcripts=comp162582_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49101475	49103582	.	+	.	ID=comp162582_c0_seq1.mrna1;geneID=comp162582_c0_seq1.path1;Name=comp162582_c0_seq1;Dir=sensecoverage=92.3;identity=98.1;matches=1776;mismatches=16;indels=19;unknowns=0;Target=comp162582_c0_seq1 690 788 +;locus=RLOC_00002842
ChrX	stalkie_big_nohaplotig	exon	49101475	49101690	97	+	.	Parent=comp162582_c0_seq1.mrna1;Target=comp162582_c0_seq1 1 210 +
ChrX	stalkie_big_nohaplotig	exon	49101751	49101919	95	+	.	Parent=comp162582_c0_seq1.mrna1;Target=comp162582_c0_seq1 211 381 +
ChrX	stalkie_big_nohaplotig	exon	49102105	49102981	98	+	.	Parent=comp162582_c0_seq1.mrna1;Target=comp162582_c0_seq1 382 1269 +
ChrX	stalkie_big_nohaplotig	exon	49103047	49103582	99	+	.	Parent=comp162582_c0_seq1.mrna1;Target=comp162582_c0_seq1 1270 1805 +
ChrX	stalkie_big_nohaplotig	CDS	49102413	49102511	.	+	0	Parent=comp162582_c0_seq1.mrna1
ChrX	gffcl	locus	49104458	49105334	.	+	.	ID=RLOC_00002843;geneIDs=FBgn0031054.1.path1;transcripts=FBgn0031054.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49104458	49105334	.	+	.	ID=FBgn0031054.1.mrna1;geneID=FBgn0031054.1.path1;Name=FBgn0031054.1;Dir=sensecoverage=100.0;identity=100.0;matches=663;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002843
ChrX	stalkie_big_nohaplotig	exon	49104458	49104762	100	+	.	Parent=FBgn0031054.1.mrna1;Target=FBgn0031054.1 1 305 +
ChrX	stalkie_big_nohaplotig	exon	49104824	49105082	100	+	.	Parent=FBgn0031054.1.mrna1;Target=FBgn0031054.1 306 564 +
ChrX	stalkie_big_nohaplotig	exon	49105236	49105334	100	+	.	Parent=FBgn0031054.1.mrna1;Target=FBgn0031054.1 565 663 +
ChrX	stalkie_big_nohaplotig	CDS	49104458	49104762	.	+	0	Parent=FBgn0031054.1.mrna1;Target=FBgn0031054.1 1 305 +
ChrX	stalkie_big_nohaplotig	CDS	49104824	49105082	.	+	1	Parent=FBgn0031054.1.mrna1;Target=FBgn0031054.1 306 564 +
ChrX	stalkie_big_nohaplotig	CDS	49105236	49105334	.	+	0	Parent=FBgn0031054.1.mrna1;Target=FBgn0031054.1 565 663 +
ChrX	gffcl	locus	49107794	49108212	.	-	.	ID=RLOC_00002844;geneIDs=comp113791_c1_seq1.path1;transcripts=comp113791_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49107794	49108212	.	-	.	ID=comp113791_c1_seq1.mrna1;geneID=comp113791_c1_seq1.path1;Name=comp113791_c1_seq1;Dir=indeterminatecoverage=92.1;identity=99.3;matches=416;mismatches=1;indels=2;unknowns=0;Target=comp113791_c1_seq1 417 1 .;CDS_Target=comp113791_c1_seq1 395 252 .;locus=RLOC_00002844
ChrX	stalkie_big_nohaplotig	exon	49107794	49108212	99	-	.	Parent=comp113791_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49107816	49107959	.	-	0	Parent=comp113791_c1_seq1.mrna1
ChrX	gffcl	locus	49110041	49127604	.	-	.	ID=RLOC_00002845;geneIDs=FBgn0032129.1.path1,comp147856_c0_seq1.path1;transcripts=FBgn0032129.1.mrna1,comp147856_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49110041	49124736	.	-	.	ID=FBgn0032129.1.mrna1;geneID=FBgn0032129.1.path1;Name=FBgn0032129.1;Dir=sensecoverage=100.0;identity=100.0;matches=2672;mismatches=0;indels=1;unknowns=0;locus=RLOC_00002845
ChrX	stalkie_big_nohaplotig	exon	49110041	49110111	98	-	.	Parent=FBgn0032129.1.mrna1;Target=FBgn0032129.1 2602 2673 +
ChrX	stalkie_big_nohaplotig	exon	49118261	49119821	100	-	.	Parent=FBgn0032129.1.mrna1;Target=FBgn0032129.1 1041 2601 +
ChrX	stalkie_big_nohaplotig	exon	49119883	49120023	100	-	.	Parent=FBgn0032129.1.mrna1;Target=FBgn0032129.1 900 1040 +
ChrX	stalkie_big_nohaplotig	exon	49120082	49120218	100	-	.	Parent=FBgn0032129.1.mrna1;Target=FBgn0032129.1 763 899 +
ChrX	stalkie_big_nohaplotig	exon	49120281	49120546	100	-	.	Parent=FBgn0032129.1.mrna1;Target=FBgn0032129.1 497 762 +
ChrX	stalkie_big_nohaplotig	exon	49121812	49122026	100	-	.	Parent=FBgn0032129.1.mrna1;Target=FBgn0032129.1 282 496 +
ChrX	stalkie_big_nohaplotig	exon	49124456	49124736	100	-	.	Parent=FBgn0032129.1.mrna1;Target=FBgn0032129.1 1 281 +
ChrX	stalkie_big_nohaplotig	CDS	49110041	49110111	.	-	0	Parent=FBgn0032129.1.mrna1;Target=FBgn0032129.1 2602 2673 +
ChrX	stalkie_big_nohaplotig	CDS	49118261	49119821	.	-	1	Parent=FBgn0032129.1.mrna1;Target=FBgn0032129.1 1041 2601 +
ChrX	stalkie_big_nohaplotig	CDS	49119883	49120023	.	-	1	Parent=FBgn0032129.1.mrna1;Target=FBgn0032129.1 900 1040 +
ChrX	stalkie_big_nohaplotig	CDS	49120082	49120218	.	-	0	Parent=FBgn0032129.1.mrna1;Target=FBgn0032129.1 763 899 +
ChrX	stalkie_big_nohaplotig	CDS	49120281	49120546	.	-	2	Parent=FBgn0032129.1.mrna1;Target=FBgn0032129.1 497 762 +
ChrX	stalkie_big_nohaplotig	CDS	49121812	49122026	.	-	1	Parent=FBgn0032129.1.mrna1;Target=FBgn0032129.1 282 496 +
ChrX	stalkie_big_nohaplotig	CDS	49124456	49124736	.	-	0	Parent=FBgn0032129.1.mrna1;Target=FBgn0032129.1 1 281 +
ChrX	stalkie_big_nohaplotig	mRNA	49124736	49127604	.	-	.	ID=comp147856_c0_seq1.mrna1;geneID=comp147856_c0_seq1.path1;Name=comp147856_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=1008;mismatches=1;indels=0;unknowns=0;Target=comp147856_c0_seq1 679 873 .;locus=RLOC_00002845
ChrX	stalkie_big_nohaplotig	exon	49124736	49125032	99	-	.	Parent=comp147856_c0_seq1.mrna1;Target=comp147856_c0_seq1 1 297 -
ChrX	stalkie_big_nohaplotig	exon	49126893	49127604	100	-	.	Parent=comp147856_c0_seq1.mrna1;Target=comp147856_c0_seq1 298 1009 -
ChrX	stalkie_big_nohaplotig	CDS	49127274	49127468	.	-	0	Parent=comp147856_c0_seq1.mrna1
ChrX	gffcl	locus	49125453	49126008	.	-	.	ID=RLOC_00002846;geneIDs=comp115799_c0_seq1.path1;transcripts=comp115799_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49125453	49126008	.	-	.	ID=comp115799_c0_seq1.mrna1;geneID=comp115799_c0_seq1.path1;Name=comp115799_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.1;matches=551;mismatches=5;indels=0;unknowns=0;Target=comp115799_c0_seq1 560 5 .;CDS_Target=comp115799_c0_seq1 180 136 .;locus=RLOC_00002846
ChrX	stalkie_big_nohaplotig	exon	49125453	49126008	99	-	.	Parent=comp115799_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49125833	49125877	.	-	0	Parent=comp115799_c0_seq1.mrna1
ChrX	gffcl	locus	49126047	49126296	.	-	.	ID=RLOC_00002847;geneIDs=comp84828_c0_seq1.path1;transcripts=comp84828_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49126047	49126296	.	-	.	ID=comp84828_c0_seq1.mrna1;geneID=comp84828_c0_seq1.path1;Name=comp84828_c0_seq1;Dir=indeterminatecoverage=94.7;identity=99.6;matches=249;mismatches=1;indels=0;unknowns=0;Target=comp84828_c0_seq1 264 15 .;CDS_Target=comp84828_c0_seq1 180 16 .;locus=RLOC_00002847
ChrX	stalkie_big_nohaplotig	exon	49126047	49126296	99	-	.	Parent=comp84828_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49126131	49126295	.	-	0	Parent=comp84828_c0_seq1.mrna1
ChrX	gffcl	locus	49193702	49194203	.	+	.	ID=RLOC_00002849;geneIDs=comp94126_c0_seq1.path1;transcripts=comp94126_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49193702	49194203	.	+	.	ID=comp94126_c0_seq1.mrna1;geneID=comp94126_c0_seq1.path1;Name=comp94126_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=501;mismatches=0;indels=5;unknowns=0;Target=comp94126_c0_seq1 505 1 .;CDS_Target=comp94126_c0_seq1 348 316 .;locus=RLOC_00002849
ChrX	stalkie_big_nohaplotig	exon	49193702	49194203	99	+	.	Parent=comp94126_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49194013	49194046	.	+	0	Parent=comp94126_c0_seq1.mrna1
ChrX	gffcl	locus	49194469	49195244	.	.	.	ID=RLOC_00002850;geneIDs=comp139421_c0_seq1.path1,comp144426_c0_seq1.path1;transcripts=comp139421_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49194632	49195244	.	-	.	ID=comp139421_c0_seq1.mrna1;geneID=comp139421_c0_seq1.path1;Name=comp139421_c0_seq1;Dir=indeterminatecoverage=97.7;identity=97.1;matches=595;mismatches=13;indels=5;unknowns=0;Target=comp139421_c0_seq1 622 15 .;CDS_Target=comp139421_c0_seq1 149 15 .;locus=RLOC_00002850
ChrX	stalkie_big_nohaplotig	exon	49194632	49195244	97	-	.	Parent=comp139421_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49195110	49195244	.	-	0	Parent=comp139421_c0_seq1.mrna1
ChrX	gffcl	locus	49196193	49198730	.	+	.	ID=RLOC_00002851;geneIDs=comp153493_c0_seq1.path1;transcripts=comp153493_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49196193	49198730	.	+	.	ID=comp153493_c0_seq1.mrna1;geneID=comp153493_c0_seq1.path1;Name=comp153493_c0_seq1;Dir=antisensecoverage=100.0;identity=99.0;matches=624;mismatches=6;indels=0;unknowns=0;Target=comp153493_c0_seq1 1 186 .;locus=RLOC_00002851
ChrX	stalkie_big_nohaplotig	exon	49196193	49196212	100	+	.	Parent=comp153493_c0_seq1.mrna1;Target=comp153493_c0_seq1 611 630 -
ChrX	stalkie_big_nohaplotig	exon	49198121	49198730	99	+	.	Parent=comp153493_c0_seq1.mrna1;Target=comp153493_c0_seq1 1 610 -
ChrX	stalkie_big_nohaplotig	CDS	49198545	49198730	.	+	0	Parent=comp153493_c0_seq1.mrna1
ChrX	gffcl	locus	49210183	49210680	.	-	.	ID=RLOC_00002852;geneIDs=comp135758_c0_seq1.path1;transcripts=comp135758_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49210183	49210680	.	-	.	ID=comp135758_c0_seq1.mrna1;geneID=comp135758_c0_seq1.path1;Name=comp135758_c0_seq1;Dir=indeterminatecoverage=97.8;identity=100.0;matches=498;mismatches=0;indels=0;unknowns=0;Target=comp135758_c0_seq1 498 1 .;CDS_Target=comp135758_c0_seq1 432 397 .;locus=RLOC_00002852
ChrX	stalkie_big_nohaplotig	exon	49210183	49210680	100	-	.	Parent=comp135758_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49210249	49210284	.	-	0	Parent=comp135758_c0_seq1.mrna1
ChrX	gffcl	locus	49211856	49213508	.	-	.	ID=RLOC_00002853;geneIDs=FBgn0029123.1.path1;transcripts=FBgn0029123.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49211856	49213508	.	-	.	ID=FBgn0029123.1.mrna1;geneID=FBgn0029123.1.path1;Name=FBgn0029123.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1653;mismatches=0;indels=0;unknowns=0;Target=FBgn0029123.1 1653 1 .;locus=RLOC_00002853
ChrX	stalkie_big_nohaplotig	exon	49211856	49213508	100	-	.	Parent=FBgn0029123.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49211856	49213508	.	-	0	Parent=FBgn0029123.1.mrna1
ChrX	gffcl	locus	49213933	49214225	.	-	.	ID=RLOC_00002854;geneIDs=comp662170_c0_seq1.path1;transcripts=comp662170_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49213933	49214225	.	-	.	ID=comp662170_c0_seq1.mrna1;geneID=comp662170_c0_seq1.path1;Name=comp662170_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.3;matches=291;mismatches=0;indels=2;unknowns=0;Target=comp662170_c0_seq1 292 2 .;CDS_Target=comp662170_c0_seq1 28 2 .;locus=RLOC_00002854
ChrX	stalkie_big_nohaplotig	exon	49213933	49214225	99	-	.	Parent=comp662170_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49214197	49214225	.	-	0	Parent=comp662170_c0_seq1.mrna1
ChrX	gffcl	locus	49279359	49279670	.	-	.	ID=RLOC_00002855;geneIDs=comp151758_c0_seq1.path1;transcripts=comp151758_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49279359	49279670	.	-	.	ID=comp151758_c0_seq1.mrna1;geneID=comp151758_c0_seq1.path1;Name=comp151758_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=310;mismatches=2;indels=0;unknowns=0;Target=comp151758_c0_seq1 312 1 .;CDS_Target=comp151758_c0_seq1 75 1 .;locus=RLOC_00002855
ChrX	stalkie_big_nohaplotig	exon	49279359	49279670	99	-	.	Parent=comp151758_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49279596	49279670	.	-	0	Parent=comp151758_c0_seq1.mrna1
ChrX	gffcl	locus	49360076	49363405	.	+	.	ID=RLOC_00002856;geneIDs=FBgn0000559.1.path1;transcripts=FBgn0000559.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49360076	49363405	.	+	.	ID=FBgn0000559.1.mrna1;geneID=FBgn0000559.1.path1;Name=FBgn0000559.1;Dir=sensecoverage=100.0;identity=100.0;matches=2541;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002856
ChrX	stalkie_big_nohaplotig	exon	49360076	49360087	100	+	.	Parent=FBgn0000559.1.mrna1;Target=FBgn0000559.1 1 12 +
ChrX	stalkie_big_nohaplotig	exon	49360408	49360521	100	+	.	Parent=FBgn0000559.1.mrna1;Target=FBgn0000559.1 13 126 +
ChrX	stalkie_big_nohaplotig	exon	49360581	49360681	100	+	.	Parent=FBgn0000559.1.mrna1;Target=FBgn0000559.1 127 227 +
ChrX	stalkie_big_nohaplotig	exon	49360744	49361271	100	+	.	Parent=FBgn0000559.1.mrna1;Target=FBgn0000559.1 228 755 +
ChrX	stalkie_big_nohaplotig	exon	49361562	49362258	100	+	.	Parent=FBgn0000559.1.mrna1;Target=FBgn0000559.1 756 1452 +
ChrX	stalkie_big_nohaplotig	exon	49362317	49363405	100	+	.	Parent=FBgn0000559.1.mrna1;Target=FBgn0000559.1 1453 2541 +
ChrX	stalkie_big_nohaplotig	CDS	49360076	49360087	.	+	0	Parent=FBgn0000559.1.mrna1;Target=FBgn0000559.1 1 12 +
ChrX	stalkie_big_nohaplotig	CDS	49360408	49360521	.	+	0	Parent=FBgn0000559.1.mrna1;Target=FBgn0000559.1 13 126 +
ChrX	stalkie_big_nohaplotig	CDS	49360581	49360681	.	+	0	Parent=FBgn0000559.1.mrna1;Target=FBgn0000559.1 127 227 +
ChrX	stalkie_big_nohaplotig	CDS	49360744	49361271	.	+	1	Parent=FBgn0000559.1.mrna1;Target=FBgn0000559.1 228 755 +
ChrX	stalkie_big_nohaplotig	CDS	49361562	49362258	.	+	1	Parent=FBgn0000559.1.mrna1;Target=FBgn0000559.1 756 1452 +
ChrX	stalkie_big_nohaplotig	CDS	49362317	49363405	.	+	0	Parent=FBgn0000559.1.mrna1;Target=FBgn0000559.1 1453 2541 +
ChrX	gffcl	locus	49395072	49395532	.	+	.	ID=RLOC_00002858;geneIDs=comp142579_c0_seq1.path1;transcripts=comp142579_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49395072	49395532	.	+	.	ID=comp142579_c0_seq1.mrna1;geneID=comp142579_c0_seq1.path1;Name=comp142579_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=461;mismatches=0;indels=0;unknowns=0;Target=comp142579_c0_seq1 461 1 .;CDS_Target=comp142579_c0_seq1 111 1 .;locus=RLOC_00002858
ChrX	stalkie_big_nohaplotig	exon	49395072	49395532	100	+	.	Parent=comp142579_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49395072	49395182	.	+	0	Parent=comp142579_c0_seq1.mrna1
ChrX	gffcl	locus	49395548	49396276	.	-	.	ID=RLOC_00002859;geneIDs=comp382436_c0_seq1.path1;transcripts=comp382436_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49395548	49396276	.	-	.	ID=comp382436_c0_seq1.mrna1;geneID=comp382436_c0_seq1.path1;Name=comp382436_c0_seq1;Dir=indeterminatecoverage=97.5;identity=99.7;matches=727;mismatches=1;indels=1;unknowns=0;Target=comp382436_c0_seq1 728 1 .;CDS_Target=comp382436_c0_seq1 728 627 .;locus=RLOC_00002859
ChrX	stalkie_big_nohaplotig	exon	49395548	49396276	99	-	.	Parent=comp382436_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49395548	49395649	.	-	0	Parent=comp382436_c0_seq1.mrna1
ChrX	gffcl	locus	49396338	49396824	.	-	.	ID=RLOC_00002860;geneIDs=comp186074_c0_seq1.path1;transcripts=comp186074_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49396338	49396824	.	-	.	ID=comp186074_c0_seq1.mrna1;geneID=comp186074_c0_seq1.path1;Name=comp186074_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=486;mismatches=1;indels=0;unknowns=0;Target=comp186074_c0_seq1 487 1 .;CDS_Target=comp186074_c0_seq1 62 3 .;locus=RLOC_00002860
ChrX	stalkie_big_nohaplotig	exon	49396338	49396824	99	-	.	Parent=comp186074_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49396763	49396822	.	-	0	Parent=comp186074_c0_seq1.mrna1
ChrX	gffcl	locus	49436055	49442808	.	-	.	ID=RLOC_00002863;geneIDs=FBgn0028878.1.path1;transcripts=FBgn0028878.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49436055	49442808	.	-	.	ID=FBgn0028878.1.mrna1;geneID=FBgn0028878.1.path1;Name=FBgn0028878.1;Dir=sensecoverage=100.0;identity=99.9;matches=1907;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002863
ChrX	stalkie_big_nohaplotig	exon	49436055	49436512	100	-	.	Parent=FBgn0028878.1.mrna1;Target=FBgn0028878.1 1451 1908 +
ChrX	stalkie_big_nohaplotig	exon	49436574	49437018	100	-	.	Parent=FBgn0028878.1.mrna1;Target=FBgn0028878.1 1006 1450 +
ChrX	stalkie_big_nohaplotig	exon	49441804	49442808	99	-	.	Parent=FBgn0028878.1.mrna1;Target=FBgn0028878.1 1 1005 +
ChrX	stalkie_big_nohaplotig	CDS	49436055	49436512	.	-	2	Parent=FBgn0028878.1.mrna1;Target=FBgn0028878.1 1451 1908 +
ChrX	stalkie_big_nohaplotig	CDS	49436574	49437018	.	-	0	Parent=FBgn0028878.1.mrna1;Target=FBgn0028878.1 1006 1450 +
ChrX	stalkie_big_nohaplotig	CDS	49441804	49442808	.	-	0	Parent=FBgn0028878.1.mrna1;Target=FBgn0028878.1 1 1005 +
ChrX	gffcl	locus	49477207	49502543	.	-	.	ID=RLOC_00002864;geneIDs=FBgn0028879.1.path1;transcripts=FBgn0028879.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49477207	49502543	.	-	.	ID=FBgn0028879.1.mrna1;geneID=FBgn0028879.1.path1;Name=FBgn0028879.1;Dir=sensecoverage=100.0;identity=99.8;matches=3762;mismatches=6;indels=0;unknowns=0;locus=RLOC_00002864
ChrX	stalkie_big_nohaplotig	exon	49477207	49477419	100	-	.	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 3556 3768 +
ChrX	stalkie_big_nohaplotig	exon	49478334	49478479	99	-	.	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 3410 3555 +
ChrX	stalkie_big_nohaplotig	exon	49478610	49478985	100	-	.	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 3034 3409 +
ChrX	stalkie_big_nohaplotig	exon	49481701	49481799	100	-	.	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 2935 3033 +
ChrX	stalkie_big_nohaplotig	exon	49485987	49486242	100	-	.	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 2679 2934 +
ChrX	stalkie_big_nohaplotig	exon	49490711	49490811	97	-	.	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 2578 2678 +
ChrX	stalkie_big_nohaplotig	exon	49491503	49491889	100	-	.	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 2191 2577 +
ChrX	stalkie_big_nohaplotig	exon	49491960	49492289	99	-	.	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 1861 2190 +
ChrX	stalkie_big_nohaplotig	exon	49492371	49492673	100	-	.	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 1558 1860 +
ChrX	stalkie_big_nohaplotig	exon	49495174	49495304	100	-	.	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 1427 1557 +
ChrX	stalkie_big_nohaplotig	exon	49495369	49495504	100	-	.	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 1291 1426 +
ChrX	stalkie_big_nohaplotig	exon	49496065	49496220	100	-	.	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 1135 1290 +
ChrX	stalkie_big_nohaplotig	exon	49496286	49496578	100	-	.	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 842 1134 +
ChrX	stalkie_big_nohaplotig	exon	49496652	49497022	100	-	.	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 471 841 +
ChrX	stalkie_big_nohaplotig	exon	49497101	49497353	100	-	.	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 218 470 +
ChrX	stalkie_big_nohaplotig	exon	49502327	49502543	99	-	.	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 1 217 +
ChrX	stalkie_big_nohaplotig	CDS	49477207	49477419	.	-	0	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 3556 3768 +
ChrX	stalkie_big_nohaplotig	CDS	49478334	49478479	.	-	2	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 3410 3555 +
ChrX	stalkie_big_nohaplotig	CDS	49478610	49478985	.	-	0	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 3034 3409 +
ChrX	stalkie_big_nohaplotig	CDS	49481701	49481799	.	-	0	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 2935 3033 +
ChrX	stalkie_big_nohaplotig	CDS	49485987	49486242	.	-	1	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 2679 2934 +
ChrX	stalkie_big_nohaplotig	CDS	49490711	49490811	.	-	0	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 2578 2678 +
ChrX	stalkie_big_nohaplotig	CDS	49491503	49491889	.	-	0	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 2191 2577 +
ChrX	stalkie_big_nohaplotig	CDS	49491960	49492289	.	-	0	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 1861 2190 +
ChrX	stalkie_big_nohaplotig	CDS	49492371	49492673	.	-	0	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 1558 1860 +
ChrX	stalkie_big_nohaplotig	CDS	49495174	49495304	.	-	2	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 1427 1557 +
ChrX	stalkie_big_nohaplotig	CDS	49495369	49495504	.	-	0	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 1291 1426 +
ChrX	stalkie_big_nohaplotig	CDS	49496065	49496220	.	-	0	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 1135 1290 +
ChrX	stalkie_big_nohaplotig	CDS	49496286	49496578	.	-	2	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 842 1134 +
ChrX	stalkie_big_nohaplotig	CDS	49496652	49497022	.	-	1	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 471 841 +
ChrX	stalkie_big_nohaplotig	CDS	49497101	49497353	.	-	2	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 218 470 +
ChrX	stalkie_big_nohaplotig	CDS	49502327	49502543	.	-	0	Parent=FBgn0028879.1.mrna1;Target=FBgn0028879.1 1 217 +
ChrX	gffcl	locus	49507552	49517854	.	-	.	ID=RLOC_00002865;geneIDs=FBgn0262526.2.path1;transcripts=FBgn0262526.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49507552	49517854	.	-	.	ID=FBgn0262526.2.mrna1;geneID=FBgn0262526.2.path1;Name=FBgn0262526.2;Dir=sensecoverage=100.0;identity=100.0;matches=1929;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002865
ChrX	stalkie_big_nohaplotig	exon	49507552	49507602	100	-	.	Parent=FBgn0262526.2.mrna1;Target=FBgn0262526.2 1879 1929 +
ChrX	stalkie_big_nohaplotig	exon	49509147	49509436	100	-	.	Parent=FBgn0262526.2.mrna1;Target=FBgn0262526.2 1589 1878 +
ChrX	stalkie_big_nohaplotig	exon	49509500	49509719	100	-	.	Parent=FBgn0262526.2.mrna1;Target=FBgn0262526.2 1369 1588 +
ChrX	stalkie_big_nohaplotig	exon	49510594	49511148	100	-	.	Parent=FBgn0262526.2.mrna1;Target=FBgn0262526.2 814 1368 +
ChrX	stalkie_big_nohaplotig	exon	49511211	49511396	100	-	.	Parent=FBgn0262526.2.mrna1;Target=FBgn0262526.2 628 813 +
ChrX	stalkie_big_nohaplotig	exon	49511467	49511624	100	-	.	Parent=FBgn0262526.2.mrna1;Target=FBgn0262526.2 470 627 +
ChrX	stalkie_big_nohaplotig	exon	49511689	49512054	100	-	.	Parent=FBgn0262526.2.mrna1;Target=FBgn0262526.2 104 469 +
ChrX	stalkie_big_nohaplotig	exon	49517682	49517727	100	-	.	Parent=FBgn0262526.2.mrna1;Target=FBgn0262526.2 58 103 +
ChrX	stalkie_big_nohaplotig	exon	49517798	49517854	100	-	.	Parent=FBgn0262526.2.mrna1;Target=FBgn0262526.2 1 57 +
ChrX	stalkie_big_nohaplotig	CDS	49507552	49507602	.	-	0	Parent=FBgn0262526.2.mrna1;Target=FBgn0262526.2 1879 1929 +
ChrX	stalkie_big_nohaplotig	CDS	49509147	49509436	.	-	2	Parent=FBgn0262526.2.mrna1;Target=FBgn0262526.2 1589 1878 +
ChrX	stalkie_big_nohaplotig	CDS	49509500	49509719	.	-	0	Parent=FBgn0262526.2.mrna1;Target=FBgn0262526.2 1369 1588 +
ChrX	stalkie_big_nohaplotig	CDS	49510594	49511148	.	-	0	Parent=FBgn0262526.2.mrna1;Target=FBgn0262526.2 814 1368 +
ChrX	stalkie_big_nohaplotig	CDS	49511211	49511396	.	-	0	Parent=FBgn0262526.2.mrna1;Target=FBgn0262526.2 628 813 +
ChrX	stalkie_big_nohaplotig	CDS	49511467	49511624	.	-	2	Parent=FBgn0262526.2.mrna1;Target=FBgn0262526.2 470 627 +
ChrX	stalkie_big_nohaplotig	CDS	49511689	49512054	.	-	2	Parent=FBgn0262526.2.mrna1;Target=FBgn0262526.2 104 469 +
ChrX	stalkie_big_nohaplotig	CDS	49517682	49517727	.	-	0	Parent=FBgn0262526.2.mrna1;Target=FBgn0262526.2 58 103 +
ChrX	stalkie_big_nohaplotig	CDS	49517798	49517854	.	-	0	Parent=FBgn0262526.2.mrna1;Target=FBgn0262526.2 1 57 +
ChrX	gffcl	locus	49513259	49515958	.	-	.	ID=RLOC_00002867;geneIDs=ORF465.path1,comp157456_c2_seq1.path1;transcripts=comp157456_c2_seq1.mrna1,ORF465.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49513259	49515958	.	-	.	ID=comp157456_c2_seq1.mrna1;geneID=comp157456_c2_seq1.path1;Name=comp157456_c2_seq1;Dir=indeterminatecoverage=96.2;identity=99.8;matches=2694;mismatches=6;indels=0;unknowns=0;Target=comp157456_c2_seq1 2700 1 .;CDS_Target=comp157456_c2_seq1 2695 1448 .;locus=RLOC_00002867
ChrX	stalkie_big_nohaplotig	exon	49513259	49515958	99	-	.	Parent=comp157456_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49513264	49514511	.	-	0	Parent=comp157456_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49513267	49515956	.	-	.	ID=ORF465.mrna1;geneID=ORF465.path1;Name=ORF465;Dir=sensecoverage=100.0;identity=99.7;matches=1765;mismatches=5;indels=0;unknowns=0;locus=RLOC_00002867
ChrX	stalkie_big_nohaplotig	exon	49513267	49514530	99	-	.	Parent=ORF465.mrna1;Target=ORF465 507 1770 +
ChrX	stalkie_big_nohaplotig	exon	49515451	49515956	99	-	.	Parent=ORF465.mrna1;Target=ORF465 1 506 +
ChrX	stalkie_big_nohaplotig	CDS	49513267	49514530	.	-	1	Parent=ORF465.mrna1;Target=ORF465 507 1770 +
ChrX	stalkie_big_nohaplotig	CDS	49515451	49515956	.	-	0	Parent=ORF465.mrna1;Target=ORF465 1 506 +
ChrX	gffcl	locus	49523554	49523839	.	+	.	ID=RLOC_00002868;geneIDs=comp142858_c0_seq1.path1;transcripts=comp142858_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49523554	49523839	.	+	.	ID=comp142858_c0_seq1.mrna1;geneID=comp142858_c0_seq1.path1;Name=comp142858_c0_seq1;Dir=indeterminatecoverage=92.9;identity=99.7;matches=285;mismatches=1;indels=0;unknowns=0;Target=comp142858_c0_seq1 286 1 .;CDS_Target=comp142858_c0_seq1 197 135 .;locus=RLOC_00002868
ChrX	stalkie_big_nohaplotig	exon	49523554	49523839	99	+	.	Parent=comp142858_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49523688	49523750	.	+	0	Parent=comp142858_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49536311	49552625	.	-	.	ID=comp150042_c0_seq1.mrna1;geneID=comp150042_c0_seq1.path1;Name=comp150042_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=1571;mismatches=0;indels=1;unknowns=0;Target=comp150042_c0_seq1 3 323 .;locus=RLOC_00002869
ChrX	stalkie_big_nohaplotig	exon	49536311	49536647	100	-	.	Parent=comp150042_c0_seq1.mrna1;Target=comp150042_c0_seq1 1 337 -
ChrX	stalkie_big_nohaplotig	exon	49551392	49552625	99	-	.	Parent=comp150042_c0_seq1.mrna1;Target=comp150042_c0_seq1 338 1572 -
ChrX	stalkie_big_nohaplotig	CDS	49536313	49536633	.	-	0	Parent=comp150042_c0_seq1.mrna1
ChrX	gffcl	locus	49532714	49534132	.	-	.	ID=RLOC_00002870;geneIDs=comp158003_c2_seq1.path1;transcripts=comp158003_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49532714	49534132	.	-	.	ID=comp158003_c2_seq1.mrna1;geneID=comp158003_c2_seq1.path1;Name=comp158003_c2_seq1;Dir=indeterminatecoverage=94.6;identity=97.7;matches=1409;mismatches=10;indels=23;unknowns=0;Target=comp158003_c2_seq1 1442 1 .;CDS_Target=comp158003_c2_seq1 1025 834 .;locus=RLOC_00002870
ChrX	stalkie_big_nohaplotig	exon	49532714	49534132	97	-	.	Parent=comp158003_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49533131	49533322	.	-	0	Parent=comp158003_c2_seq1.mrna1
ChrX	gffcl	locus	49561977	49562637	.	+	.	ID=RLOC_00002871;geneIDs=comp113812_c0_seq1.path1;transcripts=comp113812_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49561977	49562637	.	+	.	ID=comp113812_c0_seq1.mrna1;geneID=comp113812_c0_seq1.path1;Name=comp113812_c0_seq1;Dir=antisensecoverage=100.0;identity=98.5;matches=531;mismatches=8;indels=0;unknowns=0;Target=comp113812_c0_seq1 15 266 .;locus=RLOC_00002871
ChrX	stalkie_big_nohaplotig	exon	49561977	49562031	90	+	.	Parent=comp113812_c0_seq1.mrna1;Target=comp113812_c0_seq1 485 539 -
ChrX	stalkie_big_nohaplotig	exon	49562088	49562192	98	+	.	Parent=comp113812_c0_seq1.mrna1;Target=comp113812_c0_seq1 380 484 -
ChrX	stalkie_big_nohaplotig	exon	49562259	49562637	99	+	.	Parent=comp113812_c0_seq1.mrna1;Target=comp113812_c0_seq1 1 379 -
ChrX	stalkie_big_nohaplotig	CDS	49562372	49562623	.	+	0	Parent=comp113812_c0_seq1.mrna1
ChrX	gffcl	locus	49565991	49566513	.	+	.	ID=RLOC_00002872;geneIDs=comp147753_c0_seq1.path1;transcripts=comp147753_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49565991	49566513	.	+	.	ID=comp147753_c0_seq1.mrna1;geneID=comp147753_c0_seq1.path1;Name=comp147753_c0_seq1;Dir=indeterminatecoverage=40.0;identity=97.5;matches=510;mismatches=12;indels=1;unknowns=0;Target=comp147753_c0_seq1 522 1 .;CDS_Target=comp147753_c0_seq1 301 74 .;locus=RLOC_00002872
ChrX	stalkie_big_nohaplotig	exon	49565991	49566513	97	+	.	Parent=comp147753_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49566064	49566291	.	+	0	Parent=comp147753_c0_seq1.mrna1
ChrX	gffcl	locus	49588734	49597022	.	-	.	ID=RLOC_00002873;geneIDs=FBgn0028419.1.path1,comp116889_c0_seq1.path1;transcripts=FBgn0028419.1.mrna1,comp116889_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49588734	49592123	.	-	.	ID=FBgn0028419.1.mrna1;geneID=FBgn0028419.1.path1;Name=FBgn0028419.1;Dir=sensecoverage=99.8;identity=100.0;matches=799;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002873
ChrX	stalkie_big_nohaplotig	exon	49588734	49588953	100	-	.	Parent=FBgn0028419.1.mrna1;Target=FBgn0028419.1 582 801 +
ChrX	stalkie_big_nohaplotig	exon	49591387	49591520	100	-	.	Parent=FBgn0028419.1.mrna1;Target=FBgn0028419.1 448 581 +
ChrX	stalkie_big_nohaplotig	exon	49591609	49591858	100	-	.	Parent=FBgn0028419.1.mrna1;Target=FBgn0028419.1 198 447 +
ChrX	stalkie_big_nohaplotig	exon	49591929	49592123	100	-	.	Parent=FBgn0028419.1.mrna1;Target=FBgn0028419.1 3 197 +
ChrX	stalkie_big_nohaplotig	CDS	49588734	49588953	.	-	1	Parent=FBgn0028419.1.mrna1;Target=FBgn0028419.1 582 801 +
ChrX	stalkie_big_nohaplotig	CDS	49591387	49591520	.	-	0	Parent=FBgn0028419.1.mrna1;Target=FBgn0028419.1 448 581 +
ChrX	stalkie_big_nohaplotig	CDS	49591609	49591858	.	-	1	Parent=FBgn0028419.1.mrna1;Target=FBgn0028419.1 198 447 +
ChrX	stalkie_big_nohaplotig	CDS	49591929	49592122	.	-	0	Parent=FBgn0028419.1.mrna1;Target=FBgn0028419.1 4 197 +
ChrX	stalkie_big_nohaplotig	mRNA	49592100	49597022	.	-	.	ID=comp116889_c0_seq1.mrna1;geneID=comp116889_c0_seq1.path1;Name=comp116889_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=597;mismatches=0;indels=0;unknowns=0;Target=comp116889_c0_seq1 54 167 +;locus=RLOC_00002873
ChrX	stalkie_big_nohaplotig	exon	49592100	49592123	100	-	.	Parent=comp116889_c0_seq1.mrna1;Target=comp116889_c0_seq1 574 597 +
ChrX	stalkie_big_nohaplotig	exon	49596450	49597022	100	-	.	Parent=comp116889_c0_seq1.mrna1;Target=comp116889_c0_seq1 1 573 +
ChrX	stalkie_big_nohaplotig	CDS	49596856	49596969	.	-	0	Parent=comp116889_c0_seq1.mrna1
ChrX	gffcl	locus	49600358	49601638	.	+	.	ID=RLOC_00002874;geneIDs=FBgn0032818.1.path1;transcripts=FBgn0032818.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49600358	49601638	.	+	.	ID=FBgn0032818.1.mrna1;geneID=FBgn0032818.1.path1;Name=FBgn0032818.1;Dir=sensecoverage=100.0;identity=99.9;matches=1160;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002874
ChrX	stalkie_big_nohaplotig	exon	49600358	49600411	100	+	.	Parent=FBgn0032818.1.mrna1;Target=FBgn0032818.1 1 54 +
ChrX	stalkie_big_nohaplotig	exon	49600470	49600992	99	+	.	Parent=FBgn0032818.1.mrna1;Target=FBgn0032818.1 55 577 +
ChrX	stalkie_big_nohaplotig	exon	49601055	49601638	100	+	.	Parent=FBgn0032818.1.mrna1;Target=FBgn0032818.1 578 1161 +
ChrX	stalkie_big_nohaplotig	CDS	49600358	49600411	.	+	0	Parent=FBgn0032818.1.mrna1;Target=FBgn0032818.1 1 54 +
ChrX	stalkie_big_nohaplotig	CDS	49600470	49600992	.	+	0	Parent=FBgn0032818.1.mrna1;Target=FBgn0032818.1 55 577 +
ChrX	stalkie_big_nohaplotig	CDS	49601055	49601638	.	+	2	Parent=FBgn0032818.1.mrna1;Target=FBgn0032818.1 578 1161 +
ChrX	gffcl	locus	49649701	49665572	.	+	.	ID=RLOC_00002875;geneIDs=FBgn0032817.1.path1;transcripts=FBgn0032817.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49649701	49665572	.	+	.	ID=FBgn0032817.1.mrna1;geneID=FBgn0032817.1.path1;Name=FBgn0032817.1;Dir=sensecoverage=95.3;identity=100.0;matches=10355;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002875
ChrX	stalkie_big_nohaplotig	exon	49649701	49650618	99	+	.	Parent=FBgn0032817.1.mrna1;Target=FBgn0032817.1 499 1416 +
ChrX	stalkie_big_nohaplotig	exon	49652354	49652677	100	+	.	Parent=FBgn0032817.1.mrna1;Target=FBgn0032817.1 1417 1740 +
ChrX	stalkie_big_nohaplotig	exon	49652777	49652945	100	+	.	Parent=FBgn0032817.1.mrna1;Target=FBgn0032817.1 1741 1909 +
ChrX	stalkie_big_nohaplotig	exon	49655440	49655523	100	+	.	Parent=FBgn0032817.1.mrna1;Target=FBgn0032817.1 1910 1993 +
ChrX	stalkie_big_nohaplotig	exon	49655578	49655667	100	+	.	Parent=FBgn0032817.1.mrna1;Target=FBgn0032817.1 1994 2083 +
ChrX	stalkie_big_nohaplotig	exon	49656800	49665572	99	+	.	Parent=FBgn0032817.1.mrna1;Target=FBgn0032817.1 2084 10856 +
ChrX	stalkie_big_nohaplotig	CDS	49649701	49650618	.	+	0	Parent=FBgn0032817.1.mrna1;Target=FBgn0032817.1 499 1416 +
ChrX	stalkie_big_nohaplotig	CDS	49652354	49652677	.	+	0	Parent=FBgn0032817.1.mrna1;Target=FBgn0032817.1 1417 1740 +
ChrX	stalkie_big_nohaplotig	CDS	49652777	49652945	.	+	0	Parent=FBgn0032817.1.mrna1;Target=FBgn0032817.1 1741 1909 +
ChrX	stalkie_big_nohaplotig	CDS	49655440	49655523	.	+	2	Parent=FBgn0032817.1.mrna1;Target=FBgn0032817.1 1910 1993 +
ChrX	stalkie_big_nohaplotig	CDS	49655578	49655667	.	+	2	Parent=FBgn0032817.1.mrna1;Target=FBgn0032817.1 1994 2083 +
ChrX	stalkie_big_nohaplotig	CDS	49656800	49665570	.	+	2	Parent=FBgn0032817.1.mrna1;Target=FBgn0032817.1 2084 10854 +
ChrX	gffcl	locus	49677352	49678053	.	+	.	ID=RLOC_00002876;geneIDs=comp151644_c0_seq1.path1;transcripts=comp151644_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49677352	49678053	.	+	.	ID=comp151644_c0_seq1.mrna1;geneID=comp151644_c0_seq1.path1;Name=comp151644_c0_seq1;Dir=indeterminatecoverage=96.7;identity=96.6;matches=690;mismatches=5;indels=19;unknowns=0;Target=comp151644_c0_seq1 708 2 .;CDS_Target=comp151644_c0_seq1 234 163 .;locus=RLOC_00002876
ChrX	stalkie_big_nohaplotig	exon	49677352	49678053	96	+	.	Parent=comp151644_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49677513	49677580	.	+	0	Parent=comp151644_c0_seq1.mrna1
ChrX	gffcl	locus	49678158	49678369	.	-	.	ID=RLOC_00002877;geneIDs=comp117925_c0_seq1.path1;transcripts=comp117925_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49678158	49678369	.	-	.	ID=comp117925_c0_seq1.mrna1;geneID=comp117925_c0_seq1.path1;Name=comp117925_c0_seq1;Dir=indeterminatecoverage=95.9;identity=99.5;matches=211;mismatches=1;indels=0;unknowns=0;Target=comp117925_c0_seq1 221 10 .;CDS_Target=comp117925_c0_seq1 123 10 .;locus=RLOC_00002877
ChrX	stalkie_big_nohaplotig	exon	49678158	49678369	99	-	.	Parent=comp117925_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49678256	49678369	.	-	0	Parent=comp117925_c0_seq1.mrna1
ChrX	gffcl	locus	49678604	49679267	.	+	.	ID=RLOC_00002878;geneIDs=comp138561_c0_seq1.path1;transcripts=comp138561_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49678604	49679267	.	+	.	ID=comp138561_c0_seq1.mrna1;geneID=comp138561_c0_seq1.path1;Name=comp138561_c0_seq1;Dir=indeterminatecoverage=95.2;identity=96.2;matches=661;mismatches=3;indels=23;unknowns=0;Target=comp138561_c0_seq1 687 1 .;CDS_Target=comp138561_c0_seq1 265 122 .;locus=RLOC_00002878
ChrX	stalkie_big_nohaplotig	exon	49678604	49679267	96	+	.	Parent=comp138561_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49678702	49678845	.	+	0	Parent=comp138561_c0_seq1.mrna1
ChrX	gffcl	locus	49679329	49679704	.	-	.	ID=RLOC_00002879;geneIDs=comp137950_c0_seq1.path1;transcripts=comp137950_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49679329	49679704	.	-	.	ID=comp137950_c0_seq1.mrna1;geneID=comp137950_c0_seq1.path1;Name=comp137950_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.5;matches=374;mismatches=2;indels=0;unknowns=0;Target=comp137950_c0_seq1 377 2 .;CDS_Target=comp137950_c0_seq1 189 67 .;locus=RLOC_00002879
ChrX	stalkie_big_nohaplotig	exon	49679329	49679704	99	-	.	Parent=comp137950_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49679517	49679639	.	-	0	Parent=comp137950_c0_seq1.mrna1
ChrX	gffcl	locus	49680225	49681434	.	+	.	ID=RLOC_00002880;geneIDs=comp162116_c1_seq1.path2;transcripts=comp162116_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	49680225	49681434	.	+	.	ID=comp162116_c1_seq1.mrna2;geneID=comp162116_c1_seq1.path2;Name=comp162116_c1_seq1;Dir=indeterminatecoverage=60.3;identity=99.3;matches=1203;mismatches=6;indels=2;unknowns=0;Target=comp162116_c1_seq1 2008 799 .;locus=RLOC_00002880
ChrX	stalkie_big_nohaplotig	exon	49680225	49681434	99	+	.	Parent=comp162116_c1_seq1.mrna2
ChrX	gffcl	locus	49681448	49682262	.	+	.	ID=RLOC_00002881;geneIDs=comp874123_c0_seq1.path1;transcripts=comp874123_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49681448	49682262	.	+	.	ID=comp874123_c0_seq1.mrna1;geneID=comp874123_c0_seq1.path1;Name=comp874123_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.5;matches=811;mismatches=4;indels=0;unknowns=0;Target=comp874123_c0_seq1 815 1 .;CDS_Target=comp874123_c0_seq1 401 111 .;locus=RLOC_00002881
ChrX	stalkie_big_nohaplotig	exon	49681448	49682262	99	+	.	Parent=comp874123_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49681558	49681848	.	+	0	Parent=comp874123_c0_seq1.mrna1
ChrX	gffcl	locus	49682316	49683327	.	+	.	ID=RLOC_00002882;geneIDs=comp154782_c0_seq1.path1;transcripts=comp154782_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49682316	49683327	.	+	.	ID=comp154782_c0_seq1.mrna1;geneID=comp154782_c0_seq1.path1;Name=comp154782_c0_seq1;Dir=sensecoverage=98.6;identity=98.6;matches=941;mismatches=13;indels=0;unknowns=0;locus=RLOC_00002882
ChrX	stalkie_big_nohaplotig	exon	49682316	49682495	98	+	.	Parent=comp154782_c0_seq1.mrna1;Target=comp154782_c0_seq1 15 194 +
ChrX	stalkie_big_nohaplotig	exon	49682554	49683327	98	+	.	Parent=comp154782_c0_seq1.mrna1;Target=comp154782_c0_seq1 195 968 +
ChrX	stalkie_big_nohaplotig	CDS	49682478	49682495	.	+	0	Parent=comp154782_c0_seq1.mrna1;Target=comp154782_c0_seq1 177 194 +
ChrX	stalkie_big_nohaplotig	CDS	49682554	49683006	.	+	0	Parent=comp154782_c0_seq1.mrna1;Target=comp154782_c0_seq1 195 647 +
ChrX	gffcl	locus	49685385	49686076	.	-	.	ID=RLOC_00002883;geneIDs=comp151333_c0_seq1.path1;transcripts=comp151333_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49685385	49686076	.	-	.	ID=comp151333_c0_seq1.mrna1;geneID=comp151333_c0_seq1.path1;Name=comp151333_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=567;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002883
ChrX	stalkie_big_nohaplotig	exon	49685385	49685578	100	-	.	Parent=comp151333_c0_seq1.mrna1;Target=comp151333_c0_seq1 1 194 -
ChrX	stalkie_big_nohaplotig	exon	49685639	49685786	99	-	.	Parent=comp151333_c0_seq1.mrna1;Target=comp151333_c0_seq1 195 342 -
ChrX	stalkie_big_nohaplotig	exon	49685851	49686076	100	-	.	Parent=comp151333_c0_seq1.mrna1;Target=comp151333_c0_seq1 343 568 -
ChrX	stalkie_big_nohaplotig	CDS	49685397	49685578	.	-	2	Parent=comp151333_c0_seq1.mrna1;Target=comp151333_c0_seq1 13 194 .
ChrX	stalkie_big_nohaplotig	CDS	49685639	49685666	.	-	0	Parent=comp151333_c0_seq1.mrna1;Target=comp151333_c0_seq1 195 222 .
ChrX	gffcl	locus	49691350	49692361	.	-	.	ID=RLOC_00002885;geneIDs=comp154782_c0_seq1.path2;transcripts=comp154782_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	49691350	49692361	.	-	.	ID=comp154782_c0_seq1.mrna2;geneID=comp154782_c0_seq1.path2;Name=comp154782_c0_seq1;Dir=sensecoverage=98.6;identity=98.6;matches=941;mismatches=13;indels=0;unknowns=0;locus=RLOC_00002885
ChrX	stalkie_big_nohaplotig	exon	49691350	49692123	98	-	.	Parent=comp154782_c0_seq1.mrna2;Target=comp154782_c0_seq1 195 968 +
ChrX	stalkie_big_nohaplotig	exon	49692182	49692361	98	-	.	Parent=comp154782_c0_seq1.mrna2;Target=comp154782_c0_seq1 15 194 +
ChrX	stalkie_big_nohaplotig	CDS	49691671	49692123	.	-	0	Parent=comp154782_c0_seq1.mrna2;Target=comp154782_c0_seq1 195 647 +
ChrX	stalkie_big_nohaplotig	CDS	49692182	49692199	.	-	0	Parent=comp154782_c0_seq1.mrna2;Target=comp154782_c0_seq1 177 194 +
ChrX	gffcl	locus	49698306	49699548	.	+	.	ID=RLOC_00002886;geneIDs=comp159689_c0_seq1.path1;transcripts=comp159689_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49698306	49699548	.	+	.	ID=comp159689_c0_seq1.mrna1;geneID=comp159689_c0_seq1.path1;Name=comp159689_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1233;mismatches=10;indels=1;unknowns=0;Target=comp159689_c0_seq1 1244 1 .;CDS_Target=comp159689_c0_seq1 1066 1022 .;locus=RLOC_00002886
ChrX	stalkie_big_nohaplotig	exon	49698306	49699548	99	+	.	Parent=comp159689_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49699326	49699370	.	+	0	Parent=comp159689_c0_seq1.mrna1
ChrX	gffcl	locus	49708115	49708567	.	+	.	ID=RLOC_00002887;geneIDs=comp149638_c0_seq1.path1;transcripts=comp149638_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49708115	49708567	.	+	.	ID=comp149638_c0_seq1.mrna1;geneID=comp149638_c0_seq1.path1;Name=comp149638_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.2;matches=436;mismatches=12;indels=5;unknowns=0;Target=comp149638_c0_seq1 448 1 .;CDS_Target=comp149638_c0_seq1 279 166 .;locus=RLOC_00002887
ChrX	stalkie_big_nohaplotig	exon	49708115	49708567	96	+	.	Parent=comp149638_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49708280	49708393	.	+	0	Parent=comp149638_c0_seq1.mrna1
ChrX	gffcl	locus	49726045	49726292	.	+	.	ID=RLOC_00002888;geneIDs=comp51865_c0_seq1.path2;transcripts=comp51865_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	49726045	49726292	.	+	.	ID=comp51865_c0_seq1.mrna2;geneID=comp51865_c0_seq1.path2;Name=comp51865_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=244;mismatches=4;indels=0;unknowns=0;Target=comp51865_c0_seq1 248 1 .;CDS_Target=comp51865_c0_seq1 11 3 .;locus=RLOC_00002888
ChrX	stalkie_big_nohaplotig	exon	49726045	49726292	98	+	.	Parent=comp51865_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	49726047	49726055	.	+	0	Parent=comp51865_c0_seq1.mrna2
ChrX	gffcl	locus	49738329	49739061	.	.	.	ID=RLOC_00002889;geneIDs=comp134802_c0_seq1.path1,comp149934_c0_seq1.path1;transcripts=comp149934_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49738551	49739061	.	-	.	ID=comp149934_c0_seq1.mrna1;geneID=comp149934_c0_seq1.path1;Name=comp149934_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=510;mismatches=1;indels=0;unknowns=0;Target=comp149934_c0_seq1 511 1 .;CDS_Target=comp149934_c0_seq1 255 232 .;locus=RLOC_00002889
ChrX	stalkie_big_nohaplotig	exon	49738551	49739061	99	-	.	Parent=comp149934_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49738807	49738830	.	-	0	Parent=comp149934_c0_seq1.mrna1
ChrX	gffcl	locus	49739746	49739871	.	-	.	ID=RLOC_00002890;geneIDs=comp145410_c0_seq1.path2;transcripts=comp145410_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	49739746	49739871	.	-	.	ID=comp145410_c0_seq1.mrna2;geneID=comp145410_c0_seq1.path2;Name=comp145410_c0_seq1;Dir=indeterminatecoverage=41.0;identity=100.0;matches=126;mismatches=0;indels=0;unknowns=0;Target=comp145410_c0_seq1 287 162 .;locus=RLOC_00002890
ChrX	stalkie_big_nohaplotig	exon	49739746	49739871	100	-	.	Parent=comp145410_c0_seq1.mrna2
ChrX	gffcl	locus	49739873	49740033	.	+	.	ID=RLOC_00002891;geneIDs=comp145410_c0_seq1.path1;transcripts=comp145410_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49739873	49740033	.	+	.	ID=comp145410_c0_seq1.mrna1;geneID=comp145410_c0_seq1.path1;Name=comp145410_c0_seq1;Dir=indeterminatecoverage=52.4;identity=99.4;matches=160;mismatches=1;indels=0;unknowns=0;Target=comp145410_c0_seq1 161 1 .;CDS_Target=comp145410_c0_seq1 109 41 .;locus=RLOC_00002891
ChrX	stalkie_big_nohaplotig	exon	49739873	49740033	99	+	.	Parent=comp145410_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49739913	49739981	.	+	0	Parent=comp145410_c0_seq1.mrna1
ChrX	gffcl	locus	49740711	50038462	.	-	.	ID=RLOC_00002892;geneIDs=FBgn0028704.1.path1;transcripts=FBgn0028704.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49740711	50038462	.	-	.	ID=FBgn0028704.1.mrna1;geneID=FBgn0028704.1.path1;Name=FBgn0028704.1;Dir=sensecoverage=100.0;identity=99.8;matches=2014;mismatches=5;indels=0;unknowns=0;locus=RLOC_00002892
ChrX	stalkie_big_nohaplotig	exon	49740711	49740948	99	-	.	Parent=FBgn0028704.1.mrna1;Target=FBgn0028704.1 1782 2019 +
ChrX	stalkie_big_nohaplotig	exon	49777096	49777232	100	-	.	Parent=FBgn0028704.1.mrna1;Target=FBgn0028704.1 1645 1781 +
ChrX	stalkie_big_nohaplotig	exon	49777463	49777717	100	-	.	Parent=FBgn0028704.1.mrna1;Target=FBgn0028704.1 1390 1644 +
ChrX	stalkie_big_nohaplotig	exon	49793290	49793364	100	-	.	Parent=FBgn0028704.1.mrna1;Target=FBgn0028704.1 1315 1389 +
ChrX	stalkie_big_nohaplotig	exon	49807408	49807589	100	-	.	Parent=FBgn0028704.1.mrna1;Target=FBgn0028704.1 1133 1314 +
ChrX	stalkie_big_nohaplotig	exon	49863631	49863856	100	-	.	Parent=FBgn0028704.1.mrna1;Target=FBgn0028704.1 907 1132 +
ChrX	stalkie_big_nohaplotig	exon	49980785	49981404	99	-	.	Parent=FBgn0028704.1.mrna1;Target=FBgn0028704.1 287 906 +
ChrX	stalkie_big_nohaplotig	exon	50038177	50038462	98	-	.	Parent=FBgn0028704.1.mrna1;Target=FBgn0028704.1 1 286 +
ChrX	stalkie_big_nohaplotig	CDS	49740711	49740948	.	-	1	Parent=FBgn0028704.1.mrna1;Target=FBgn0028704.1 1782 2019 +
ChrX	stalkie_big_nohaplotig	CDS	49777096	49777232	.	-	0	Parent=FBgn0028704.1.mrna1;Target=FBgn0028704.1 1645 1781 +
ChrX	stalkie_big_nohaplotig	CDS	49777463	49777717	.	-	0	Parent=FBgn0028704.1.mrna1;Target=FBgn0028704.1 1390 1644 +
ChrX	stalkie_big_nohaplotig	CDS	49793290	49793364	.	-	0	Parent=FBgn0028704.1.mrna1;Target=FBgn0028704.1 1315 1389 +
ChrX	stalkie_big_nohaplotig	CDS	49807408	49807589	.	-	2	Parent=FBgn0028704.1.mrna1;Target=FBgn0028704.1 1133 1314 +
ChrX	stalkie_big_nohaplotig	CDS	49863631	49863856	.	-	0	Parent=FBgn0028704.1.mrna1;Target=FBgn0028704.1 907 1132 +
ChrX	stalkie_big_nohaplotig	CDS	49980785	49981404	.	-	2	Parent=FBgn0028704.1.mrna1;Target=FBgn0028704.1 287 906 +
ChrX	stalkie_big_nohaplotig	CDS	50038177	50038462	.	-	0	Parent=FBgn0028704.1.mrna1;Target=FBgn0028704.1 1 286 +
ChrX	gffcl	locus	49772888	49775624	.	+	.	ID=RLOC_00002893;geneIDs=comp161254_c0_seq1.path1;transcripts=comp161254_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49772888	49775624	.	+	.	ID=comp161254_c0_seq1.mrna1;geneID=comp161254_c0_seq1.path1;Name=comp161254_c0_seq1;Dir=antisensecoverage=98.1;identity=97.5;matches=1648;mismatches=20;indels=22;unknowns=0;locus=RLOC_00002893
ChrX	stalkie_big_nohaplotig	exon	49772888	49773103	100	+	.	Parent=comp161254_c0_seq1.mrna1;Target=comp161254_c0_seq1 1487 1702 -
ChrX	stalkie_big_nohaplotig	exon	49773168	49773634	99	+	.	Parent=comp161254_c0_seq1.mrna1;Target=comp161254_c0_seq1 1020 1486 -
ChrX	stalkie_big_nohaplotig	exon	49774410	49774567	88	+	.	Parent=comp161254_c0_seq1.mrna1;Target=comp161254_c0_seq1 858 1019 -
ChrX	stalkie_big_nohaplotig	exon	49774628	49774741	100	+	.	Parent=comp161254_c0_seq1.mrna1;Target=comp161254_c0_seq1 744 857 -
ChrX	stalkie_big_nohaplotig	exon	49774911	49775624	97	+	.	Parent=comp161254_c0_seq1.mrna1;Target=comp161254_c0_seq1 14 743 -
ChrX	stalkie_big_nohaplotig	CDS	49773089	49773103	.	+	0	Parent=comp161254_c0_seq1.mrna1;Target=comp161254_c0_seq1 1487 1501 .
ChrX	stalkie_big_nohaplotig	CDS	49773168	49773551	.	+	0	Parent=comp161254_c0_seq1.mrna1;Target=comp161254_c0_seq1 1103 1486 .
ChrX	gffcl	locus	49789743	49790609	.	+	.	ID=RLOC_00002894;geneIDs=ORF2397.path3;transcripts=ORF2397.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	49789743	49790609	.	+	.	ID=ORF2397.mrna3;geneID=ORF2397.path3;Name=ORF2397;Dir=indeterminatecoverage=100.0;identity=98.4;matches=853;mismatches=14;indels=0;unknowns=0;Target=ORF2397 867 1 .;locus=RLOC_00002894
ChrX	stalkie_big_nohaplotig	exon	49789743	49790609	98	+	.	Parent=ORF2397.mrna3
ChrX	stalkie_big_nohaplotig	CDS	49789743	49790609	.	+	0	Parent=ORF2397.mrna3
ChrX	gffcl	locus	49833320	49834298	.	-	.	ID=RLOC_00002895;geneIDs=comp156538_c0_seq1.path1;transcripts=comp156538_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49833320	49834298	.	-	.	ID=comp156538_c0_seq1.mrna1;geneID=comp156538_c0_seq1.path1;Name=comp156538_c0_seq1;Dir=sensecoverage=99.8;identity=99.7;matches=914;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002895
ChrX	stalkie_big_nohaplotig	exon	49833320	49834067	99	-	.	Parent=comp156538_c0_seq1.mrna1;Target=comp156538_c0_seq1 171 918 +
ChrX	stalkie_big_nohaplotig	exon	49834130	49834298	100	-	.	Parent=comp156538_c0_seq1.mrna1;Target=comp156538_c0_seq1 2 170 +
ChrX	stalkie_big_nohaplotig	CDS	49833597	49834067	.	-	0	Parent=comp156538_c0_seq1.mrna1;Target=comp156538_c0_seq1 171 641 +
ChrX	stalkie_big_nohaplotig	CDS	49834130	49834144	.	-	0	Parent=comp156538_c0_seq1.mrna1;Target=comp156538_c0_seq1 156 170 +
ChrX	gffcl	locus	49843189	49844162	.	+	.	ID=RLOC_00002896;geneIDs=comp161065_c0_seq1.path1;transcripts=comp161065_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49843189	49844162	.	+	.	ID=comp161065_c0_seq1.mrna1;geneID=comp161065_c0_seq1.path1;Name=comp161065_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=953;mismatches=21;indels=1;unknowns=0;Target=comp161065_c0_seq1 975 1 .;CDS_Target=comp161065_c0_seq1 621 259 .;locus=RLOC_00002896
ChrX	stalkie_big_nohaplotig	exon	49843189	49844162	97	+	.	Parent=comp161065_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49843446	49843808	.	+	0	Parent=comp161065_c0_seq1.mrna1
ChrX	gffcl	locus	49855434	49855716	.	+	.	ID=RLOC_00002897;geneIDs=comp149821_c0_seq1.path2;transcripts=comp149821_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	49855434	49855716	.	+	.	ID=comp149821_c0_seq1.mrna2;geneID=comp149821_c0_seq1.path2;Name=comp149821_c0_seq1;Dir=antisensecoverage=51.1;identity=100.0;matches=224;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002897
ChrX	stalkie_big_nohaplotig	exon	49855434	49855509	100	+	.	Parent=comp149821_c0_seq1.mrna2;Target=comp149821_c0_seq1 363 438 -
ChrX	stalkie_big_nohaplotig	exon	49855569	49855716	100	+	.	Parent=comp149821_c0_seq1.mrna2;Target=comp149821_c0_seq1 215 362 -
ChrX	stalkie_big_nohaplotig	CDS	49855434	49855509	.	+	2	Parent=comp149821_c0_seq1.mrna2;Target=comp149821_c0_seq1 363 438 .
ChrX	stalkie_big_nohaplotig	CDS	49855569	49855579	.	+	1	Parent=comp149821_c0_seq1.mrna2;Target=comp149821_c0_seq1 352 362 .
ChrX	gffcl	locus	49873470	49874335	.	+	.	ID=RLOC_00002898;geneIDs=comp147462_c0_seq1.path1;transcripts=comp147462_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49873470	49874335	.	+	.	ID=comp147462_c0_seq1.mrna1;geneID=comp147462_c0_seq1.path1;Name=comp147462_c0_seq1;Dir=sensecoverage=99.3;identity=99.5;matches=799;mismatches=4;indels=0;unknowns=0;locus=RLOC_00002898
ChrX	stalkie_big_nohaplotig	exon	49873470	49873583	100	+	.	Parent=comp147462_c0_seq1.mrna1;Target=comp147462_c0_seq1 2 115 +
ChrX	stalkie_big_nohaplotig	exon	49873647	49874335	99	+	.	Parent=comp147462_c0_seq1.mrna1;Target=comp147462_c0_seq1 116 804 +
ChrX	stalkie_big_nohaplotig	CDS	49873569	49873583	.	+	0	Parent=comp147462_c0_seq1.mrna1;Target=comp147462_c0_seq1 101 115 +
ChrX	stalkie_big_nohaplotig	CDS	49873647	49874126	.	+	0	Parent=comp147462_c0_seq1.mrna1;Target=comp147462_c0_seq1 116 595 +
ChrX	gffcl	locus	49892796	49893786	.	-	.	ID=RLOC_00002899;geneIDs=comp154414_c0_seq1.path1;transcripts=comp154414_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49892796	49893786	.	-	.	ID=comp154414_c0_seq1.mrna1;geneID=comp154414_c0_seq1.path1;Name=comp154414_c0_seq1;Dir=sensecoverage=98.6;identity=99.9;matches=928;mismatches=0;indels=1;unknowns=0;locus=RLOC_00002899
ChrX	stalkie_big_nohaplotig	exon	49892796	49893536	100	-	.	Parent=comp154414_c0_seq1.mrna1;Target=comp154414_c0_seq1 202 942 +
ChrX	stalkie_big_nohaplotig	exon	49893600	49893786	99	-	.	Parent=comp154414_c0_seq1.mrna1;Target=comp154414_c0_seq1 14 201 +
ChrX	stalkie_big_nohaplotig	CDS	49893520	49893536	.	-	0	Parent=comp154414_c0_seq1.mrna1;Target=comp154414_c0_seq1 202 218 +
ChrX	stalkie_big_nohaplotig	CDS	49893600	49893614	.	-	0	Parent=comp154414_c0_seq1.mrna1;Target=comp154414_c0_seq1 186 201 +
ChrX	gffcl	locus	49935617	49936398	.	-	.	ID=RLOC_00002900;geneIDs=comp146603_c0_seq1.path1;transcripts=comp146603_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	49935617	49936398	.	-	.	ID=comp146603_c0_seq1.mrna1;geneID=comp146603_c0_seq1.path1;Name=comp146603_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=782;mismatches=0;indels=0;unknowns=0;Target=comp146603_c0_seq1 782 1 .;CDS_Target=comp146603_c0_seq1 723 598 .;locus=RLOC_00002900
ChrX	stalkie_big_nohaplotig	exon	49935617	49936398	100	-	.	Parent=comp146603_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	49935676	49935801	.	-	0	Parent=comp146603_c0_seq1.mrna1
ChrX	gffcl	locus	50000144	50001663	.	+	.	ID=RLOC_00002901;geneIDs=comp158288_c2_seq1.path2;transcripts=comp158288_c2_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	50000144	50001663	.	+	.	ID=comp158288_c2_seq1.mrna2;geneID=comp158288_c2_seq1.path2;Name=comp158288_c2_seq1;Dir=sensecoverage=90.5;identity=97.8;matches=1193;mismatches=27;indels=0;unknowns=0;locus=RLOC_00002901
ChrX	stalkie_big_nohaplotig	exon	50000144	50000262	87	+	.	Parent=comp158288_c2_seq1.mrna2;Target=comp158288_c2_seq1 128 246 +
ChrX	stalkie_big_nohaplotig	exon	50000326	50000924	99	+	.	Parent=comp158288_c2_seq1.mrna2;Target=comp158288_c2_seq1 247 845 +
ChrX	stalkie_big_nohaplotig	exon	50001162	50001663	98	+	.	Parent=comp158288_c2_seq1.mrna2;Target=comp158288_c2_seq1 846 1347 +
ChrX	stalkie_big_nohaplotig	CDS	50000248	50000262	.	+	0	Parent=comp158288_c2_seq1.mrna2;Target=comp158288_c2_seq1 232 246 +
ChrX	stalkie_big_nohaplotig	CDS	50000326	50000805	.	+	0	Parent=comp158288_c2_seq1.mrna2;Target=comp158288_c2_seq1 247 726 +
ChrX	gffcl	locus	50032601	50033547	.	-	.	ID=RLOC_00002903;geneIDs=comp150447_c0_seq1.path1;transcripts=comp150447_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50032601	50033547	.	-	.	ID=comp150447_c0_seq1.mrna1;geneID=comp150447_c0_seq1.path1;Name=comp150447_c0_seq1;Dir=antisensecoverage=97.4;identity=99.9;matches=884;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002903
ChrX	stalkie_big_nohaplotig	exon	50032601	50033341	99	-	.	Parent=comp150447_c0_seq1.mrna1;Target=comp150447_c0_seq1 1 741 -
ChrX	stalkie_big_nohaplotig	exon	50033404	50033547	100	-	.	Parent=comp150447_c0_seq1.mrna1;Target=comp150447_c0_seq1 742 885 -
ChrX	stalkie_big_nohaplotig	CDS	50032862	50033341	.	-	0	Parent=comp150447_c0_seq1.mrna1;Target=comp150447_c0_seq1 262 741 .
ChrX	stalkie_big_nohaplotig	CDS	50033404	50033418	.	-	0	Parent=comp150447_c0_seq1.mrna1;Target=comp150447_c0_seq1 742 756 .
ChrX	gffcl	locus	50041938	50042395	.	-	.	ID=RLOC_00002904;geneIDs=comp641467_c0_seq1.path1;transcripts=comp641467_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50041938	50042395	.	-	.	ID=comp641467_c0_seq1.mrna1;geneID=comp641467_c0_seq1.path1;Name=comp641467_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=457;mismatches=1;indels=0;unknowns=0;Target=comp641467_c0_seq1 458 1 .;CDS_Target=comp641467_c0_seq1 124 2 .;locus=RLOC_00002904
ChrX	stalkie_big_nohaplotig	exon	50041938	50042395	99	-	.	Parent=comp641467_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	50042272	50042394	.	-	0	Parent=comp641467_c0_seq1.mrna1
ChrX	gffcl	locus	50042461	50070107	.	-	.	ID=RLOC_00002905;geneIDs=comp115942_c0_seq1.path1;transcripts=comp115942_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50042461	50070107	.	-	.	ID=comp115942_c0_seq1.mrna1;geneID=comp115942_c0_seq1.path1;Name=comp115942_c0_seq1;Dir=antisensecoverage=98.4;identity=99.7;matches=606;mismatches=2;indels=0;unknowns=0;Target=comp115942_c0_seq1 475 606 .;locus=RLOC_00002905
ChrX	stalkie_big_nohaplotig	exon	50042461	50042915	99	-	.	Parent=comp115942_c0_seq1.mrna1;Target=comp115942_c0_seq1 1 455 -
ChrX	stalkie_big_nohaplotig	exon	50069955	50070107	100	-	.	Parent=comp115942_c0_seq1.mrna1;Target=comp115942_c0_seq1 456 608 -
ChrX	stalkie_big_nohaplotig	CDS	50069974	50070105	.	-	0	Parent=comp115942_c0_seq1.mrna1
ChrX	gffcl	locus	50082067	50082968	.	+	.	ID=RLOC_00002906;geneIDs=FBgn0039116.2.path2;transcripts=FBgn0039116.2.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	50082067	50082968	.	+	.	ID=FBgn0039116.2.mrna2;geneID=FBgn0039116.2.path2;Name=FBgn0039116.2;Dir=sensecoverage=100.0;identity=99.2;matches=735;mismatches=6;indels=0;unknowns=0;locus=RLOC_00002906
ChrX	stalkie_big_nohaplotig	exon	50082067	50082147	98	+	.	Parent=FBgn0039116.2.mrna2;Target=FBgn0039116.2 1 81 +
ChrX	stalkie_big_nohaplotig	exon	50082248	50082568	98	+	.	Parent=FBgn0039116.2.mrna2;Target=FBgn0039116.2 82 402 +
ChrX	stalkie_big_nohaplotig	exon	50082630	50082968	99	+	.	Parent=FBgn0039116.2.mrna2;Target=FBgn0039116.2 403 741 +
ChrX	stalkie_big_nohaplotig	CDS	50082067	50082147	.	+	0	Parent=FBgn0039116.2.mrna2;Target=FBgn0039116.2 1 81 +
ChrX	stalkie_big_nohaplotig	CDS	50082248	50082568	.	+	0	Parent=FBgn0039116.2.mrna2;Target=FBgn0039116.2 82 402 +
ChrX	stalkie_big_nohaplotig	CDS	50082630	50082968	.	+	0	Parent=FBgn0039116.2.mrna2;Target=FBgn0039116.2 403 741 +
ChrX	gffcl	locus	50088171	50088808	.	+	.	ID=RLOC_00002907;geneIDs=comp144481_c0_seq1.path1;transcripts=comp144481_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50088171	50088808	.	+	.	ID=comp144481_c0_seq1.mrna1;geneID=comp144481_c0_seq1.path1;Name=comp144481_c0_seq1;Dir=sensecoverage=99.8;identity=99.0;matches=573;mismatches=3;indels=3;unknowns=0;Target=comp144481_c0_seq1 2 301 +;locus=RLOC_00002907
ChrX	stalkie_big_nohaplotig	exon	50088171	50088489	100	+	.	Parent=comp144481_c0_seq1.mrna1;Target=comp144481_c0_seq1 1 319 +
ChrX	stalkie_big_nohaplotig	exon	50088552	50088808	97	+	.	Parent=comp144481_c0_seq1.mrna1;Target=comp144481_c0_seq1 320 579 +
ChrX	stalkie_big_nohaplotig	CDS	50088172	50088471	.	+	0	Parent=comp144481_c0_seq1.mrna1
ChrX	gffcl	locus	50109459	50110433	.	-	.	ID=RLOC_00002908;geneIDs=comp158953_c0_seq1.path1;transcripts=comp158953_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50109459	50110433	.	-	.	ID=comp158953_c0_seq1.mrna1;geneID=comp158953_c0_seq1.path1;Name=comp158953_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=962;mismatches=13;indels=0;unknowns=0;Target=comp158953_c0_seq1 975 1 .;CDS_Target=comp158953_c0_seq1 974 387 .;locus=RLOC_00002908
ChrX	stalkie_big_nohaplotig	exon	50109459	50110433	98	-	.	Parent=comp158953_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	50109460	50110047	.	-	0	Parent=comp158953_c0_seq1.mrna1
ChrX	gffcl	locus	50113551	50114454	.	-	.	ID=RLOC_00002909;geneIDs=FBgn0039116.2.path1;transcripts=FBgn0039116.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50113551	50114454	.	-	.	ID=FBgn0039116.2.mrna1;geneID=FBgn0039116.2.path1;Name=FBgn0039116.2;Dir=sensecoverage=100.0;identity=99.5;matches=737;mismatches=4;indels=0;unknowns=0;locus=RLOC_00002909
ChrX	stalkie_big_nohaplotig	exon	50113551	50113889	99	-	.	Parent=FBgn0039116.2.mrna1;Target=FBgn0039116.2 403 741 +
ChrX	stalkie_big_nohaplotig	exon	50113953	50114273	100	-	.	Parent=FBgn0039116.2.mrna1;Target=FBgn0039116.2 82 402 +
ChrX	stalkie_big_nohaplotig	exon	50114374	50114454	96	-	.	Parent=FBgn0039116.2.mrna1;Target=FBgn0039116.2 1 81 +
ChrX	stalkie_big_nohaplotig	CDS	50113551	50113889	.	-	0	Parent=FBgn0039116.2.mrna1;Target=FBgn0039116.2 403 741 +
ChrX	stalkie_big_nohaplotig	CDS	50113953	50114273	.	-	0	Parent=FBgn0039116.2.mrna1;Target=FBgn0039116.2 82 402 +
ChrX	stalkie_big_nohaplotig	CDS	50114374	50114436	.	-	0	Parent=FBgn0039116.2.mrna1;Target=FBgn0039116.2 19 81 +
ChrX	gffcl	locus	50124810	50125673	.	-	.	ID=RLOC_00002910;geneIDs=ORF2397.path2;transcripts=ORF2397.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	50124810	50125673	.	-	.	ID=ORF2397.mrna2;geneID=ORF2397.path2;Name=ORF2397;Dir=indeterminatecoverage=100.0;identity=98.4;matches=853;mismatches=11;indels=3;unknowns=0;Target=ORF2397 867 1 .;locus=RLOC_00002910
ChrX	stalkie_big_nohaplotig	exon	50124810	50125673	98	-	.	Parent=ORF2397.mrna2
ChrX	stalkie_big_nohaplotig	CDS	50124810	50125673	.	-	0	Parent=ORF2397.mrna2
ChrX	gffcl	locus	50138727	50156479	.	+	.	ID=RLOC_00002911;geneIDs=FBgn0032981.1.path1;transcripts=FBgn0032981.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50138727	50156479	.	+	.	ID=FBgn0032981.1.mrna1;geneID=FBgn0032981.1.path1;Name=FBgn0032981.1;Dir=sensecoverage=100.0;identity=100.0;matches=1278;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002911
ChrX	stalkie_big_nohaplotig	exon	50138727	50138882	100	+	.	Parent=FBgn0032981.1.mrna1;Target=FBgn0032981.1 1 156 +
ChrX	stalkie_big_nohaplotig	exon	50155230	50155455	100	+	.	Parent=FBgn0032981.1.mrna1;Target=FBgn0032981.1 157 382 +
ChrX	stalkie_big_nohaplotig	exon	50155520	50156019	100	+	.	Parent=FBgn0032981.1.mrna1;Target=FBgn0032981.1 383 882 +
ChrX	stalkie_big_nohaplotig	exon	50156084	50156479	100	+	.	Parent=FBgn0032981.1.mrna1;Target=FBgn0032981.1 883 1278 +
ChrX	stalkie_big_nohaplotig	CDS	50138727	50138882	.	+	0	Parent=FBgn0032981.1.mrna1;Target=FBgn0032981.1 1 156 +
ChrX	stalkie_big_nohaplotig	CDS	50155230	50155455	.	+	0	Parent=FBgn0032981.1.mrna1;Target=FBgn0032981.1 157 382 +
ChrX	stalkie_big_nohaplotig	CDS	50155520	50156019	.	+	2	Parent=FBgn0032981.1.mrna1;Target=FBgn0032981.1 383 882 +
ChrX	stalkie_big_nohaplotig	CDS	50156084	50156479	.	+	0	Parent=FBgn0032981.1.mrna1;Target=FBgn0032981.1 883 1278 +
ChrX	gffcl	locus	50163957	50167524	.	+	.	ID=RLOC_00002912;geneIDs=FBgn0022720.1.path1;transcripts=FBgn0022720.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50163957	50167524	.	+	.	ID=FBgn0022720.1.mrna1;geneID=FBgn0022720.1.path1;Name=FBgn0022720.1;Dir=sensecoverage=100.0;identity=100.0;matches=2195;mismatches=0;indels=1;unknowns=0;Target=FBgn0022720.1 3 107 +;locus=RLOC_00002912
ChrX	stalkie_big_nohaplotig	exon	50163957	50164666	99	+	.	Parent=FBgn0022720.1.mrna1;Target=FBgn0022720.1 1 711 +
ChrX	stalkie_big_nohaplotig	exon	50164729	50165230	100	+	.	Parent=FBgn0022720.1.mrna1;Target=FBgn0022720.1 712 1213 +
ChrX	stalkie_big_nohaplotig	exon	50165294	50165769	100	+	.	Parent=FBgn0022720.1.mrna1;Target=FBgn0022720.1 1214 1689 +
ChrX	stalkie_big_nohaplotig	exon	50167018	50167524	100	+	.	Parent=FBgn0022720.1.mrna1;Target=FBgn0022720.1 1690 2196 +
ChrX	stalkie_big_nohaplotig	CDS	50163959	50164062	.	+	0	Parent=FBgn0022720.1.mrna1
ChrX	gffcl	locus	50175251	50175914	.	+	.	ID=RLOC_00002913;geneIDs=comp138027_c0_seq1.path1;transcripts=comp138027_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50175251	50175914	.	+	.	ID=comp138027_c0_seq1.mrna1;geneID=comp138027_c0_seq1.path1;Name=comp138027_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=664;mismatches=0;indels=0;unknowns=0;Target=comp138027_c0_seq1 664 1 .;CDS_Target=comp138027_c0_seq1 108 1 .;locus=RLOC_00002913
ChrX	stalkie_big_nohaplotig	exon	50175251	50175914	100	+	.	Parent=comp138027_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	50175251	50175358	.	+	0	Parent=comp138027_c0_seq1.mrna1
ChrX	gffcl	locus	50177262	50180221	.	-	.	ID=RLOC_00002914;geneIDs=FBgn0011291.1.path1;transcripts=FBgn0011291.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50177262	50180221	.	-	.	ID=FBgn0011291.1.mrna1;geneID=FBgn0011291.1.path1;Name=FBgn0011291.1;Dir=sensecoverage=100.0;identity=100.0;matches=579;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002914
ChrX	stalkie_big_nohaplotig	exon	50177262	50177395	100	-	.	Parent=FBgn0011291.1.mrna1;Target=FBgn0011291.1 446 579 +
ChrX	stalkie_big_nohaplotig	exon	50179688	50179872	100	-	.	Parent=FBgn0011291.1.mrna1;Target=FBgn0011291.1 261 445 +
ChrX	stalkie_big_nohaplotig	exon	50179962	50180221	100	-	.	Parent=FBgn0011291.1.mrna1;Target=FBgn0011291.1 1 260 +
ChrX	stalkie_big_nohaplotig	CDS	50177262	50177395	.	-	2	Parent=FBgn0011291.1.mrna1;Target=FBgn0011291.1 446 579 +
ChrX	stalkie_big_nohaplotig	CDS	50179688	50179872	.	-	1	Parent=FBgn0011291.1.mrna1;Target=FBgn0011291.1 261 445 +
ChrX	stalkie_big_nohaplotig	CDS	50179962	50180221	.	-	0	Parent=FBgn0011291.1.mrna1;Target=FBgn0011291.1 1 260 +
ChrX	gffcl	locus	50177772	50178234	.	+	.	ID=RLOC_00002915;geneIDs=comp147808_c0_seq1.path1;transcripts=comp147808_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50177772	50178234	.	+	.	ID=comp147808_c0_seq1.mrna1;geneID=comp147808_c0_seq1.path1;Name=comp147808_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=461;mismatches=1;indels=1;unknowns=0;Target=comp147808_c0_seq1 462 1 .;CDS_Target=comp147808_c0_seq1 461 258 .;locus=RLOC_00002915
ChrX	stalkie_big_nohaplotig	exon	50177772	50178234	99	+	.	Parent=comp147808_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	50178030	50178233	.	+	0	Parent=comp147808_c0_seq1.mrna1
ChrX	gffcl	locus	50183967	50191140	.	+	.	ID=RLOC_00002916;geneIDs=FBgn0025117.1.path1;transcripts=FBgn0025117.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50183967	50191140	.	+	.	ID=FBgn0025117.1.mrna1;geneID=FBgn0025117.1.path1;Name=FBgn0025117.1;Dir=sensecoverage=100.0;identity=100.0;matches=1458;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002916
ChrX	stalkie_big_nohaplotig	exon	50183967	50184150	100	+	.	Parent=FBgn0025117.1.mrna1;Target=FBgn0025117.1 1 184 +
ChrX	stalkie_big_nohaplotig	exon	50184209	50185057	100	+	.	Parent=FBgn0025117.1.mrna1;Target=FBgn0025117.1 185 1033 +
ChrX	stalkie_big_nohaplotig	exon	50190716	50191140	100	+	.	Parent=FBgn0025117.1.mrna1;Target=FBgn0025117.1 1034 1458 +
ChrX	stalkie_big_nohaplotig	CDS	50183967	50184150	.	+	0	Parent=FBgn0025117.1.mrna1;Target=FBgn0025117.1 1 184 +
ChrX	stalkie_big_nohaplotig	CDS	50184209	50185057	.	+	2	Parent=FBgn0025117.1.mrna1;Target=FBgn0025117.1 185 1033 +
ChrX	stalkie_big_nohaplotig	CDS	50190716	50191140	.	+	2	Parent=FBgn0025117.1.mrna1;Target=FBgn0025117.1 1034 1458 +
ChrX	gffcl	locus	50191349	50198473	.	-	.	ID=RLOC_00002917;geneIDs=comp145236_c0_seq1.path1,comp156778_c0_seq1.path1;transcripts=comp145236_c0_seq1.mrna1,comp156778_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50191349	50196133	.	-	.	ID=comp145236_c0_seq1.mrna1;geneID=comp145236_c0_seq1.path1;Name=comp145236_c0_seq1;Dir=sensecoverage=100.0;identity=96.3;matches=234;mismatches=4;indels=5;unknowns=0;Target=comp145236_c0_seq1 2 22 +;locus=RLOC_00002917
ChrX	stalkie_big_nohaplotig	exon	50191349	50191534	96	-	.	Parent=comp145236_c0_seq1.mrna1;Target=comp145236_c0_seq1 53 243 +
ChrX	stalkie_big_nohaplotig	exon	50196082	50196133	96	-	.	Parent=comp145236_c0_seq1.mrna1;Target=comp145236_c0_seq1 1 52 +
ChrX	stalkie_big_nohaplotig	CDS	50196112	50196132	.	-	0	Parent=comp145236_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50194429	50198473	.	-	.	ID=comp156778_c0_seq1.mrna1;geneID=comp156778_c0_seq1.path1;Name=comp156778_c0_seq1;Dir=antisensecoverage=99.5;identity=99.3;matches=1373;mismatches=9;indels=0;unknowns=0;Target=comp156778_c0_seq1 537 1232 .;locus=RLOC_00002917
ChrX	stalkie_big_nohaplotig	exon	50194429	50194873	99	-	.	Parent=comp156778_c0_seq1.mrna1;Target=comp156778_c0_seq1 3 447 -
ChrX	stalkie_big_nohaplotig	exon	50196082	50196149	100	-	.	Parent=comp156778_c0_seq1.mrna1;Target=comp156778_c0_seq1 448 515 -
ChrX	stalkie_big_nohaplotig	exon	50196207	50196943	99	-	.	Parent=comp156778_c0_seq1.mrna1;Target=comp156778_c0_seq1 516 1252 -
ChrX	stalkie_big_nohaplotig	exon	50198278	50198311	100	-	.	Parent=comp156778_c0_seq1.mrna1;Target=comp156778_c0_seq1 1253 1286 -
ChrX	stalkie_big_nohaplotig	exon	50198376	50198473	95	-	.	Parent=comp156778_c0_seq1.mrna1;Target=comp156778_c0_seq1 1287 1384 -
ChrX	stalkie_big_nohaplotig	CDS	50196228	50196923	.	-	0	Parent=comp156778_c0_seq1.mrna1
ChrX	gffcl	locus	50204533	50206164	.	+	.	ID=RLOC_00002918;geneIDs=comp161776_c0_seq1.path1;transcripts=comp161776_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50204533	50206164	.	+	.	ID=comp161776_c0_seq1.mrna1;geneID=comp161776_c0_seq1.path1;Name=comp161776_c0_seq1;Dir=sensecoverage=92.9;identity=98.1;matches=832;mismatches=11;indels=5;unknowns=0;locus=RLOC_00002918
ChrX	stalkie_big_nohaplotig	exon	50204533	50204745	98	+	.	Parent=comp161776_c0_seq1.mrna1;Target=comp161776_c0_seq1 41 254 +
ChrX	stalkie_big_nohaplotig	exon	50204799	50204872	100	+	.	Parent=comp161776_c0_seq1.mrna1;Target=comp161776_c0_seq1 255 328 +
ChrX	stalkie_big_nohaplotig	exon	50204955	50205087	99	+	.	Parent=comp161776_c0_seq1.mrna1;Target=comp161776_c0_seq1 329 461 +
ChrX	stalkie_big_nohaplotig	exon	50205537	50205581	95	+	.	Parent=comp161776_c0_seq1.mrna1;Target=comp161776_c0_seq1 462 506 +
ChrX	stalkie_big_nohaplotig	exon	50205668	50205882	97	+	.	Parent=comp161776_c0_seq1.mrna1;Target=comp161776_c0_seq1 507 721 +
ChrX	stalkie_big_nohaplotig	exon	50205944	50205996	100	+	.	Parent=comp161776_c0_seq1.mrna1;Target=comp161776_c0_seq1 722 774 +
ChrX	stalkie_big_nohaplotig	exon	50206053	50206164	95	+	.	Parent=comp161776_c0_seq1.mrna1;Target=comp161776_c0_seq1 775 886 +
ChrX	stalkie_big_nohaplotig	CDS	50204705	50204745	.	+	0	Parent=comp161776_c0_seq1.mrna1;Target=comp161776_c0_seq1 213 254 +
ChrX	stalkie_big_nohaplotig	CDS	50204799	50204801	.	+	1	Parent=comp161776_c0_seq1.mrna1;Target=comp161776_c0_seq1 255 257 +
ChrX	gffcl	locus	50215416	50215680	.	-	.	ID=RLOC_00002919;geneIDs=comp117656_c0_seq1.path1;transcripts=comp117656_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50215416	50215680	.	-	.	ID=comp117656_c0_seq1.mrna1;geneID=comp117656_c0_seq1.path1;Name=comp117656_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.2;matches=257;mismatches=8;indels=5;unknowns=0;Target=comp117656_c0_seq1 270 1 .;CDS_Target=comp117656_c0_seq1 78 1 .;locus=RLOC_00002919
ChrX	stalkie_big_nohaplotig	exon	50215416	50215680	95	-	.	Parent=comp117656_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	50215603	50215680	.	-	0	Parent=comp117656_c0_seq1.mrna1
ChrX	gffcl	locus	50221480	50225101	.	+	.	ID=RLOC_00002920;geneIDs=comp163680_c0_seq1.path1;transcripts=comp163680_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50221480	50225101	.	+	.	ID=comp163680_c0_seq1.mrna1;geneID=comp163680_c0_seq1.path1;Name=comp163680_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=1032;mismatches=2;indels=0;unknowns=0;Target=comp163680_c0_seq1 326 481 +;locus=RLOC_00002920
ChrX	stalkie_big_nohaplotig	exon	50221480	50221599	100	+	.	Parent=comp163680_c0_seq1.mrna1;Target=comp163680_c0_seq1 1 120 +
ChrX	stalkie_big_nohaplotig	exon	50222226	50222414	99	+	.	Parent=comp163680_c0_seq1.mrna1;Target=comp163680_c0_seq1 121 309 +
ChrX	stalkie_big_nohaplotig	exon	50223241	50223597	99	+	.	Parent=comp163680_c0_seq1.mrna1;Target=comp163680_c0_seq1 310 666 +
ChrX	stalkie_big_nohaplotig	exon	50224734	50225101	100	+	.	Parent=comp163680_c0_seq1.mrna1;Target=comp163680_c0_seq1 667 1034 +
ChrX	stalkie_big_nohaplotig	CDS	50223257	50223412	.	+	0	Parent=comp163680_c0_seq1.mrna1
ChrX	gffcl	locus	50229410	50229771	.	-	.	ID=RLOC_00002921;geneIDs=comp409083_c0_seq1.path1;transcripts=comp409083_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50229410	50229771	.	-	.	ID=comp409083_c0_seq1.mrna1;geneID=comp409083_c0_seq1.path1;Name=comp409083_c0_seq1;Dir=indeterminatecoverage=98.9;identity=100.0;matches=362;mismatches=0;indels=0;unknowns=0;Target=comp409083_c0_seq1 366 5 .;CDS_Target=comp409083_c0_seq1 273 121 .;locus=RLOC_00002921
ChrX	stalkie_big_nohaplotig	exon	50229410	50229771	100	-	.	Parent=comp409083_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	50229503	50229655	.	-	0	Parent=comp409083_c0_seq1.mrna1
ChrX	gffcl	locus	50244012	50244837	.	+	.	ID=RLOC_00002922;geneIDs=comp146817_c1_seq1.path1;transcripts=comp146817_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50244012	50244837	.	+	.	ID=comp146817_c1_seq1.mrna1;geneID=comp146817_c1_seq1.path1;Name=comp146817_c1_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=728;mismatches=0;indels=0;unknowns=0;Target=comp146817_c1_seq1 114 287 +;locus=RLOC_00002922
ChrX	stalkie_big_nohaplotig	exon	50244012	50244122	100	+	.	Parent=comp146817_c1_seq1.mrna1;Target=comp146817_c1_seq1 1 111 +
ChrX	stalkie_big_nohaplotig	exon	50244221	50244837	100	+	.	Parent=comp146817_c1_seq1.mrna1;Target=comp146817_c1_seq1 112 728 +
ChrX	stalkie_big_nohaplotig	CDS	50244223	50244396	.	+	0	Parent=comp146817_c1_seq1.mrna1
ChrX	gffcl	locus	50287326	50288145	.	-	.	ID=RLOC_00002923;geneIDs=ORF3178.path1;transcripts=ORF3178.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50287326	50288145	.	-	.	ID=ORF3178.mrna1;geneID=ORF3178.path1;Name=ORF3178;Dir=sensecoverage=100.0;identity=99.6;matches=756;mismatches=3;indels=0;unknowns=0;locus=RLOC_00002923
ChrX	stalkie_big_nohaplotig	exon	50287326	50288060	99	-	.	Parent=ORF3178.mrna1;Target=ORF3178 25 759 +
ChrX	stalkie_big_nohaplotig	exon	50288122	50288145	100	-	.	Parent=ORF3178.mrna1;Target=ORF3178 1 24 +
ChrX	stalkie_big_nohaplotig	CDS	50287326	50288060	.	-	0	Parent=ORF3178.mrna1;Target=ORF3178 25 759 +
ChrX	stalkie_big_nohaplotig	CDS	50288122	50288145	.	-	0	Parent=ORF3178.mrna1;Target=ORF3178 1 24 +
ChrX	gffcl	locus	50329119	50330417	.	+	.	ID=RLOC_00002924;geneIDs=FBgn0032144.1.path1;transcripts=FBgn0032144.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50329119	50330417	.	+	.	ID=FBgn0032144.1.mrna1;geneID=FBgn0032144.1.path1;Name=FBgn0032144.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1299;mismatches=0;indels=0;unknowns=0;Target=FBgn0032144.1 1299 1 .;locus=RLOC_00002924
ChrX	stalkie_big_nohaplotig	exon	50329119	50330417	100	+	.	Parent=FBgn0032144.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	50329119	50330417	.	+	0	Parent=FBgn0032144.1.mrna1
ChrX	gffcl	locus	50335001	50335916	.	-	.	ID=RLOC_00002925;geneIDs=comp134978_c0_seq1.path1;transcripts=comp134978_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50335001	50335916	.	-	.	ID=comp134978_c0_seq1.mrna1;geneID=comp134978_c0_seq1.path1;Name=comp134978_c0_seq1;Dir=antisensecoverage=98.7;identity=99.0;matches=797;mismatches=1;indels=7;unknowns=0;locus=RLOC_00002925
ChrX	stalkie_big_nohaplotig	exon	50335001	50335266	97	-	.	Parent=comp134978_c0_seq1.mrna1;Target=comp134978_c0_seq1 1 273 -
ChrX	stalkie_big_nohaplotig	exon	50335332	50335770	100	-	.	Parent=comp134978_c0_seq1.mrna1;Target=comp134978_c0_seq1 274 712 -
ChrX	stalkie_big_nohaplotig	exon	50335824	50335916	100	-	.	Parent=comp134978_c0_seq1.mrna1;Target=comp134978_c0_seq1 713 805 -
ChrX	stalkie_big_nohaplotig	CDS	50335345	50335770	.	-	0	Parent=comp134978_c0_seq1.mrna1;Target=comp134978_c0_seq1 287 712 .
ChrX	stalkie_big_nohaplotig	CDS	50335824	50335838	.	-	0	Parent=comp134978_c0_seq1.mrna1;Target=comp134978_c0_seq1 713 727 .
ChrX	gffcl	locus	50345565	50355144	.	-	.	ID=RLOC_00002926;geneIDs=FBgn0065109.1.path1,comp160201_c0_seq1.path1;transcripts=comp160201_c0_seq1.mrna1,FBgn0065109.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50345565	50355144	.	-	.	ID=comp160201_c0_seq1.mrna1;geneID=comp160201_c0_seq1.path1;Name=comp160201_c0_seq1;Dir=antisensecoverage=99.8;identity=99.6;matches=3986;mismatches=12;indels=2;unknowns=0;locus=RLOC_00002926
ChrX	stalkie_big_nohaplotig	exon	50345565	50345940	99	-	.	Parent=comp160201_c0_seq1.mrna1;Target=comp160201_c0_seq1 8 383 -
ChrX	stalkie_big_nohaplotig	exon	50347370	50347989	98	-	.	Parent=comp160201_c0_seq1.mrna1;Target=comp160201_c0_seq1 384 1005 -
ChrX	stalkie_big_nohaplotig	exon	50348330	50348865	99	-	.	Parent=comp160201_c0_seq1.mrna1;Target=comp160201_c0_seq1 1006 1541 -
ChrX	stalkie_big_nohaplotig	exon	50348932	50349398	100	-	.	Parent=comp160201_c0_seq1.mrna1;Target=comp160201_c0_seq1 1542 2008 -
ChrX	stalkie_big_nohaplotig	exon	50350008	50350313	100	-	.	Parent=comp160201_c0_seq1.mrna1;Target=comp160201_c0_seq1 2009 2314 -
ChrX	stalkie_big_nohaplotig	exon	50351046	50352170	99	-	.	Parent=comp160201_c0_seq1.mrna1;Target=comp160201_c0_seq1 2315 3439 -
ChrX	stalkie_big_nohaplotig	exon	50354511	50354925	100	-	.	Parent=comp160201_c0_seq1.mrna1;Target=comp160201_c0_seq1 3440 3854 -
ChrX	stalkie_big_nohaplotig	exon	50354992	50355144	100	-	.	Parent=comp160201_c0_seq1.mrna1;Target=comp160201_c0_seq1 3855 4007 -
ChrX	stalkie_big_nohaplotig	CDS	50348693	50348865	.	-	2	Parent=comp160201_c0_seq1.mrna1;Target=comp160201_c0_seq1 1369 1541 .
ChrX	stalkie_big_nohaplotig	CDS	50348932	50349398	.	-	1	Parent=comp160201_c0_seq1.mrna1;Target=comp160201_c0_seq1 1542 2008 .
ChrX	stalkie_big_nohaplotig	CDS	50350008	50350313	.	-	1	Parent=comp160201_c0_seq1.mrna1;Target=comp160201_c0_seq1 2009 2314 .
ChrX	stalkie_big_nohaplotig	CDS	50351046	50351761	.	-	0	Parent=comp160201_c0_seq1.mrna1;Target=comp160201_c0_seq1 2315 3030 .
ChrX	stalkie_big_nohaplotig	mRNA	50345729	50351779	.	-	.	ID=FBgn0065109.1.mrna1;geneID=FBgn0065109.1.path1;Name=FBgn0065109.1;Dir=sensecoverage=100.0;identity=100.0;matches=1995;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002926
ChrX	stalkie_big_nohaplotig	exon	50345729	50345940	100	-	.	Parent=FBgn0065109.1.mrna1;Target=FBgn0065109.1 1784 1995 +
ChrX	stalkie_big_nohaplotig	exon	50347370	50347476	100	-	.	Parent=FBgn0065109.1.mrna1;Target=FBgn0065109.1 1677 1783 +
ChrX	stalkie_big_nohaplotig	exon	50348697	50348865	100	-	.	Parent=FBgn0065109.1.mrna1;Target=FBgn0065109.1 1508 1676 +
ChrX	stalkie_big_nohaplotig	exon	50348932	50349398	100	-	.	Parent=FBgn0065109.1.mrna1;Target=FBgn0065109.1 1041 1507 +
ChrX	stalkie_big_nohaplotig	exon	50350008	50350313	100	-	.	Parent=FBgn0065109.1.mrna1;Target=FBgn0065109.1 735 1040 +
ChrX	stalkie_big_nohaplotig	exon	50351046	50351779	100	-	.	Parent=FBgn0065109.1.mrna1;Target=FBgn0065109.1 1 734 +
ChrX	stalkie_big_nohaplotig	CDS	50345729	50345940	.	-	2	Parent=FBgn0065109.1.mrna1;Target=FBgn0065109.1 1784 1995 +
ChrX	stalkie_big_nohaplotig	CDS	50347370	50347476	.	-	1	Parent=FBgn0065109.1.mrna1;Target=FBgn0065109.1 1677 1783 +
ChrX	stalkie_big_nohaplotig	CDS	50348697	50348865	.	-	2	Parent=FBgn0065109.1.mrna1;Target=FBgn0065109.1 1508 1676 +
ChrX	stalkie_big_nohaplotig	CDS	50348932	50349398	.	-	1	Parent=FBgn0065109.1.mrna1;Target=FBgn0065109.1 1041 1507 +
ChrX	stalkie_big_nohaplotig	CDS	50350008	50350313	.	-	1	Parent=FBgn0065109.1.mrna1;Target=FBgn0065109.1 735 1040 +
ChrX	stalkie_big_nohaplotig	CDS	50351046	50351779	.	-	0	Parent=FBgn0065109.1.mrna1;Target=FBgn0065109.1 1 734 +
ChrX	gffcl	locus	50360840	50362066	.	-	.	ID=RLOC_00002927;geneIDs=ORF1118.path1;transcripts=ORF1118.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50360840	50362066	.	-	.	ID=ORF1118.mrna1;geneID=ORF1118.path1;Name=ORF1118;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1226;mismatches=1;indels=0;unknowns=0;Target=ORF1118 1227 1 .;locus=RLOC_00002927
ChrX	stalkie_big_nohaplotig	exon	50360840	50362066	99	-	.	Parent=ORF1118.mrna1
ChrX	stalkie_big_nohaplotig	CDS	50360840	50362066	.	-	0	Parent=ORF1118.mrna1
ChrX	gffcl	locus	50377046	50377140	.	-	.	ID=RLOC_00002928;geneIDs=comp159801_c0_seq1.path1;transcripts=comp159801_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50377046	50377140	.	-	.	ID=comp159801_c0_seq1.mrna1;geneID=comp159801_c0_seq1.path1;Name=comp159801_c0_seq1;Dir=indeterminatecoverage=7.0;identity=98.9;matches=94;mismatches=1;indels=0;unknowns=0;Target=comp159801_c0_seq1 95 1 .;locus=RLOC_00002928
ChrX	stalkie_big_nohaplotig	exon	50377046	50377140	98	-	.	Parent=comp159801_c0_seq1.mrna1
ChrX	gffcl	locus	50431218	50432084	.	-	.	ID=RLOC_00002929;geneIDs=ORF2397.path1;transcripts=ORF2397.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50431218	50432084	.	-	.	ID=ORF2397.mrna1;geneID=ORF2397.path1;Name=ORF2397;Dir=indeterminatecoverage=100.0;identity=98.8;matches=857;mismatches=10;indels=0;unknowns=0;Target=ORF2397 867 1 .;locus=RLOC_00002929
ChrX	stalkie_big_nohaplotig	exon	50431218	50432084	98	-	.	Parent=ORF2397.mrna1
ChrX	stalkie_big_nohaplotig	CDS	50431218	50432084	.	-	0	Parent=ORF2397.mrna1
ChrX	gffcl	locus	50441285	50441861	.	-	.	ID=RLOC_00002931;geneIDs=comp147853_c0_seq1.path1;transcripts=comp147853_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50441285	50441861	.	-	.	ID=comp147853_c0_seq1.mrna1;geneID=comp147853_c0_seq1.path1;Name=comp147853_c0_seq1;Dir=antisensecoverage=100.0;identity=98.3;matches=515;mismatches=8;indels=1;unknowns=0;Target=comp147853_c0_seq1 164 523 .;locus=RLOC_00002931
ChrX	stalkie_big_nohaplotig	exon	50441285	50441423	95	-	.	Parent=comp147853_c0_seq1.mrna1;Target=comp147853_c0_seq1 1 140 -
ChrX	stalkie_big_nohaplotig	exon	50441478	50441861	99	-	.	Parent=comp147853_c0_seq1.mrna1;Target=comp147853_c0_seq1 141 524 -
ChrX	stalkie_big_nohaplotig	CDS	50441501	50441860	.	-	0	Parent=comp147853_c0_seq1.mrna1
ChrX	gffcl	locus	50454045	50454841	.	-	.	ID=RLOC_00002932;geneIDs=comp64594_c0_seq1.path1;transcripts=comp64594_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50454045	50454841	.	-	.	ID=comp64594_c0_seq1.mrna1;geneID=comp64594_c0_seq1.path1;Name=comp64594_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=797;mismatches=0;indels=1;unknowns=0;Target=comp64594_c0_seq1 798 1 .;CDS_Target=comp64594_c0_seq1 791 519 .;locus=RLOC_00002932
ChrX	stalkie_big_nohaplotig	exon	50454045	50454841	99	-	.	Parent=comp64594_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	50454052	50454324	.	-	0	Parent=comp64594_c0_seq1.mrna1
ChrX	gffcl	locus	50475929	50743541	.	-	.	ID=RLOC_00002933;geneIDs=comp160341_c0_seq1.path1;transcripts=comp160341_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50475929	50743541	.	-	.	ID=comp160341_c0_seq1.mrna1;geneID=comp160341_c0_seq1.path1;Name=comp160341_c0_seq1;Dir=indeterminatecoverage=92.9;identity=98.3;matches=1127;mismatches=18;indels=2;unknowns=0;Target=comp160341_c0_seq1 368 246 .;locus=RLOC_00002933
ChrX	stalkie_big_nohaplotig	exon	50475929	50475938	72	-	.	Parent=comp160341_c0_seq1.mrna1;Target=comp160341_c0_seq1 1150 1140 .
ChrX	stalkie_big_nohaplotig	exon	50476957	50476966	90	-	.	Parent=comp160341_c0_seq1.mrna1;Target=comp160341_c0_seq1 1139 1130 .
ChrX	stalkie_big_nohaplotig	exon	50479433	50479439	100	-	.	Parent=comp160341_c0_seq1.mrna1;Target=comp160341_c0_seq1 1129 1123 .
ChrX	stalkie_big_nohaplotig	exon	50480278	50480288	100	-	.	Parent=comp160341_c0_seq1.mrna1;Target=comp160341_c0_seq1 1119 1109 .
ChrX	stalkie_big_nohaplotig	exon	50485522	50485539	100	-	.	Parent=comp160341_c0_seq1.mrna1;Target=comp160341_c0_seq1 1108 1091 .
ChrX	stalkie_big_nohaplotig	exon	50489330	50489335	100	-	.	Parent=comp160341_c0_seq1.mrna1;Target=comp160341_c0_seq1 1090 1085 .
ChrX	stalkie_big_nohaplotig	exon	50494500	50494502	100	-	.	Parent=comp160341_c0_seq1.mrna1;Target=comp160341_c0_seq1 1084 1082 .
ChrX	stalkie_big_nohaplotig	exon	50500049	50500050	100	-	.	Parent=comp160341_c0_seq1.mrna1;Target=comp160341_c0_seq1 1081 1080 .
ChrX	stalkie_big_nohaplotig	exon	50505696	50505698	100	-	.	Parent=comp160341_c0_seq1.mrna1;Target=comp160341_c0_seq1 1079 1077 .
ChrX	stalkie_big_nohaplotig	exon	50520577	50520579	100	-	.	Parent=comp160341_c0_seq1.mrna1;Target=comp160341_c0_seq1 1076 1074 .
ChrX	stalkie_big_nohaplotig	exon	50528149	50528155	100	-	.	Parent=comp160341_c0_seq1.mrna1;Target=comp160341_c0_seq1 1073 1067 .
ChrX	stalkie_big_nohaplotig	exon	50536047	50536049	100	-	.	Parent=comp160341_c0_seq1.mrna1;Target=comp160341_c0_seq1 1066 1064 .
ChrX	stalkie_big_nohaplotig	exon	50742480	50743541	98	-	.	Parent=comp160341_c0_seq1.mrna1;Target=comp160341_c0_seq1 1063 1 .
ChrX	stalkie_big_nohaplotig	CDS	50743174	50743296	.	-	0	Parent=comp160341_c0_seq1.mrna1
ChrX	gffcl	locus	50489342	50498240	.	+	.	ID=RLOC_00002934;geneIDs=FBgn0032147.1.path1;transcripts=FBgn0032147.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50489342	50498240	.	+	.	ID=FBgn0032147.1.mrna1;geneID=FBgn0032147.1.path1;Name=FBgn0032147.1;Dir=sensecoverage=97.5;identity=100.0;matches=1035;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002934
ChrX	stalkie_big_nohaplotig	exon	50489342	50489440	100	+	.	Parent=FBgn0032147.1.mrna1;Target=FBgn0032147.1 28 126 +
ChrX	stalkie_big_nohaplotig	exon	50496850	50496971	100	+	.	Parent=FBgn0032147.1.mrna1;Target=FBgn0032147.1 127 248 +
ChrX	stalkie_big_nohaplotig	exon	50497427	50498240	100	+	.	Parent=FBgn0032147.1.mrna1;Target=FBgn0032147.1 249 1062 +
ChrX	stalkie_big_nohaplotig	CDS	50489342	50489440	.	+	0	Parent=FBgn0032147.1.mrna1;Target=FBgn0032147.1 28 126 +
ChrX	stalkie_big_nohaplotig	CDS	50496850	50496971	.	+	0	Parent=FBgn0032147.1.mrna1;Target=FBgn0032147.1 127 248 +
ChrX	stalkie_big_nohaplotig	CDS	50497427	50498240	.	+	1	Parent=FBgn0032147.1.mrna1;Target=FBgn0032147.1 249 1062 +
ChrX	gffcl	locus	50511553	50512554	.	+	.	ID=RLOC_00002936;geneIDs=FBgn0032149.1.path1;transcripts=FBgn0032149.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50511553	50512554	.	+	.	ID=FBgn0032149.1.mrna1;geneID=FBgn0032149.1.path1;Name=FBgn0032149.1;Dir=sensecoverage=100.0;identity=99.9;matches=947;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002936
ChrX	stalkie_big_nohaplotig	exon	50511553	50512295	100	+	.	Parent=FBgn0032149.1.mrna1;Target=FBgn0032149.1 1 743 +
ChrX	stalkie_big_nohaplotig	exon	50512350	50512554	99	+	.	Parent=FBgn0032149.1.mrna1;Target=FBgn0032149.1 744 948 +
ChrX	stalkie_big_nohaplotig	CDS	50511553	50512295	.	+	0	Parent=FBgn0032149.1.mrna1;Target=FBgn0032149.1 1 743 +
ChrX	stalkie_big_nohaplotig	CDS	50512350	50512554	.	+	1	Parent=FBgn0032149.1.mrna1;Target=FBgn0032149.1 744 948 +
ChrX	gffcl	locus	50514884	50516367	.	-	.	ID=RLOC_00002937;geneIDs=FBgn0032150.1.path1;transcripts=FBgn0032150.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50514884	50516367	.	-	.	ID=FBgn0032150.1.mrna1;geneID=FBgn0032150.1.path1;Name=FBgn0032150.1;Dir=sensecoverage=100.0;identity=99.9;matches=1417;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002937
ChrX	stalkie_big_nohaplotig	exon	50514884	50516125	99	-	.	Parent=FBgn0032150.1.mrna1;Target=FBgn0032150.1 178 1419 +
ChrX	stalkie_big_nohaplotig	exon	50516191	50516367	100	-	.	Parent=FBgn0032150.1.mrna1;Target=FBgn0032150.1 1 177 +
ChrX	stalkie_big_nohaplotig	CDS	50514884	50516125	.	-	0	Parent=FBgn0032150.1.mrna1;Target=FBgn0032150.1 178 1419 +
ChrX	stalkie_big_nohaplotig	CDS	50516191	50516367	.	-	0	Parent=FBgn0032150.1.mrna1;Target=FBgn0032150.1 1 177 +
ChrX	gffcl	locus	50521648	50522307	.	+	.	ID=RLOC_00002938;geneIDs=comp151787_c0_seq1.path1;transcripts=comp151787_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50521648	50522307	.	+	.	ID=comp151787_c0_seq1.mrna1;geneID=comp151787_c0_seq1.path1;Name=comp151787_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=508;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002938
ChrX	stalkie_big_nohaplotig	exon	50521648	50521829	100	+	.	Parent=comp151787_c0_seq1.mrna1;Target=comp151787_c0_seq1 329 510 -
ChrX	stalkie_big_nohaplotig	exon	50521980	50522307	99	+	.	Parent=comp151787_c0_seq1.mrna1;Target=comp151787_c0_seq1 1 328 -
ChrX	stalkie_big_nohaplotig	CDS	50521790	50521829	.	+	0	Parent=comp151787_c0_seq1.mrna1;Target=comp151787_c0_seq1 329 368 .
ChrX	stalkie_big_nohaplotig	CDS	50521980	50522305	.	+	2	Parent=comp151787_c0_seq1.mrna1;Target=comp151787_c0_seq1 3 328 .
ChrX	gffcl	locus	50525152	50525804	.	+	.	ID=RLOC_00002939;geneIDs=comp139899_c0_seq1.path1;transcripts=comp139899_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50525152	50525804	.	+	.	ID=comp139899_c0_seq1.mrna1;geneID=comp139899_c0_seq1.path1;Name=comp139899_c0_seq1;Dir=indeterminatecoverage=90.1;identity=96.8;matches=602;mismatches=14;indels=6;unknowns=0;Target=comp139899_c0_seq1 505 416 .;locus=RLOC_00002939
ChrX	stalkie_big_nohaplotig	exon	50525152	50525686	96	+	.	Parent=comp139899_c0_seq1.mrna1;Target=comp139899_c0_seq1 529 1 .
ChrX	stalkie_big_nohaplotig	exon	50525718	50525804	100	+	.	Parent=comp139899_c0_seq1.mrna1;Target=comp139899_c0_seq1 621 535 .
ChrX	stalkie_big_nohaplotig	CDS	50525573	50525662	.	+	0	Parent=comp139899_c0_seq1.mrna1
ChrX	gffcl	locus	50527362	50529379	.	+	.	ID=RLOC_00002940;geneIDs=comp162110_c0_seq1.path1;transcripts=comp162110_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50527362	50529379	.	+	.	ID=comp162110_c0_seq1.mrna1;geneID=comp162110_c0_seq1.path1;Name=comp162110_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=1577;mismatches=30;indels=12;unknowns=0;Target=comp162110_c0_seq1 670 530 .;locus=RLOC_00002940
ChrX	stalkie_big_nohaplotig	exon	50527362	50528579	97	+	.	Parent=comp162110_c0_seq1.mrna1;Target=comp162110_c0_seq1 1224 1 .
ChrX	stalkie_big_nohaplotig	exon	50528636	50528992	98	+	.	Parent=comp162110_c0_seq1.mrna1;Target=comp162110_c0_seq1 1581 1225 .
ChrX	stalkie_big_nohaplotig	exon	50529345	50529379	97	+	.	Parent=comp162110_c0_seq1.mrna1;Target=comp162110_c0_seq1 1616 1582 .
ChrX	stalkie_big_nohaplotig	CDS	50527885	50528025	.	+	0	Parent=comp162110_c0_seq1.mrna1
ChrX	gffcl	locus	50529514	50531744	.	+	.	ID=RLOC_00002941;geneIDs=FBgn0032787.1.path1;transcripts=FBgn0032787.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50529514	50531744	.	+	.	ID=FBgn0032787.1.mrna1;geneID=FBgn0032787.1.path1;Name=FBgn0032787.1;Dir=sensecoverage=100.0;identity=100.0;matches=1134;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002941
ChrX	stalkie_big_nohaplotig	exon	50529514	50529651	100	+	.	Parent=FBgn0032787.1.mrna1;Target=FBgn0032787.1 1 138 +
ChrX	stalkie_big_nohaplotig	exon	50529706	50529947	100	+	.	Parent=FBgn0032787.1.mrna1;Target=FBgn0032787.1 139 380 +
ChrX	stalkie_big_nohaplotig	exon	50530031	50530291	100	+	.	Parent=FBgn0032787.1.mrna1;Target=FBgn0032787.1 381 641 +
ChrX	stalkie_big_nohaplotig	exon	50530357	50530438	100	+	.	Parent=FBgn0032787.1.mrna1;Target=FBgn0032787.1 642 723 +
ChrX	stalkie_big_nohaplotig	exon	50530495	50530702	100	+	.	Parent=FBgn0032787.1.mrna1;Target=FBgn0032787.1 724 931 +
ChrX	stalkie_big_nohaplotig	exon	50531542	50531744	100	+	.	Parent=FBgn0032787.1.mrna1;Target=FBgn0032787.1 932 1134 +
ChrX	stalkie_big_nohaplotig	CDS	50529514	50529651	.	+	0	Parent=FBgn0032787.1.mrna1;Target=FBgn0032787.1 1 138 +
ChrX	stalkie_big_nohaplotig	CDS	50529706	50529947	.	+	0	Parent=FBgn0032787.1.mrna1;Target=FBgn0032787.1 139 380 +
ChrX	stalkie_big_nohaplotig	CDS	50530031	50530291	.	+	1	Parent=FBgn0032787.1.mrna1;Target=FBgn0032787.1 381 641 +
ChrX	stalkie_big_nohaplotig	CDS	50530357	50530438	.	+	1	Parent=FBgn0032787.1.mrna1;Target=FBgn0032787.1 642 723 +
ChrX	stalkie_big_nohaplotig	CDS	50530495	50530702	.	+	0	Parent=FBgn0032787.1.mrna1;Target=FBgn0032787.1 724 931 +
ChrX	stalkie_big_nohaplotig	CDS	50531542	50531744	.	+	2	Parent=FBgn0032787.1.mrna1;Target=FBgn0032787.1 932 1134 +
ChrX	gffcl	locus	50534710	50535467	.	-	.	ID=RLOC_00002942;geneIDs=comp142647_c0_seq1.path1;transcripts=comp142647_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50534710	50535467	.	-	.	ID=comp142647_c0_seq1.mrna1;geneID=comp142647_c0_seq1.path1;Name=comp142647_c0_seq1;Dir=sensecoverage=98.9;identity=99.2;matches=637;mismatches=4;indels=1;unknowns=0;locus=RLOC_00002942
ChrX	stalkie_big_nohaplotig	exon	50534710	50535031	99	-	.	Parent=comp142647_c0_seq1.mrna1;Target=comp142647_c0_seq1 327 648 +
ChrX	stalkie_big_nohaplotig	exon	50535094	50535236	100	-	.	Parent=comp142647_c0_seq1.mrna1;Target=comp142647_c0_seq1 184 326 +
ChrX	stalkie_big_nohaplotig	exon	50535291	50535467	98	-	.	Parent=comp142647_c0_seq1.mrna1;Target=comp142647_c0_seq1 8 183 +
ChrX	stalkie_big_nohaplotig	CDS	50534819	50535031	.	-	0	Parent=comp142647_c0_seq1.mrna1;Target=comp142647_c0_seq1 327 539 +
ChrX	stalkie_big_nohaplotig	CDS	50535094	50535236	.	-	2	Parent=comp142647_c0_seq1.mrna1;Target=comp142647_c0_seq1 184 326 +
ChrX	stalkie_big_nohaplotig	CDS	50535291	50535315	.	-	0	Parent=comp142647_c0_seq1.mrna1;Target=comp142647_c0_seq1 159 183 +
ChrX	gffcl	locus	50555077	50555687	.	-	.	ID=RLOC_00002943;geneIDs=comp130910_c0_seq1.path1;transcripts=comp130910_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50555077	50555687	.	-	.	ID=comp130910_c0_seq1.mrna1;geneID=comp130910_c0_seq1.path1;Name=comp130910_c0_seq1;Dir=sensecoverage=98.9;identity=100.0;matches=557;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002943
ChrX	stalkie_big_nohaplotig	exon	50555077	50555528	100	-	.	Parent=comp130910_c0_seq1.mrna1;Target=comp130910_c0_seq1 106 557 +
ChrX	stalkie_big_nohaplotig	exon	50555583	50555687	100	-	.	Parent=comp130910_c0_seq1.mrna1;Target=comp130910_c0_seq1 1 105 +
ChrX	stalkie_big_nohaplotig	CDS	50555313	50555528	.	-	0	Parent=comp130910_c0_seq1.mrna1;Target=comp130910_c0_seq1 106 321 +
ChrX	stalkie_big_nohaplotig	CDS	50555583	50555609	.	-	0	Parent=comp130910_c0_seq1.mrna1;Target=comp130910_c0_seq1 79 105 +
ChrX	gffcl	locus	50586896	50588014	.	+	.	ID=RLOC_00002944;geneIDs=ORF1382.path1;transcripts=ORF1382.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50586896	50588014	.	+	.	ID=ORF1382.mrna1;geneID=ORF1382.path1;Name=ORF1382;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1117;mismatches=2;indels=0;unknowns=0;Target=ORF1382 1119 1 .;locus=RLOC_00002944
ChrX	stalkie_big_nohaplotig	exon	50586896	50588014	99	+	.	Parent=ORF1382.mrna1
ChrX	stalkie_big_nohaplotig	CDS	50586896	50588014	.	+	0	Parent=ORF1382.mrna1
ChrX	gffcl	locus	50630253	50630690	.	-	.	ID=RLOC_00002945;geneIDs=comp238804_c0_seq1.path1;transcripts=comp238804_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50630253	50630690	.	-	.	ID=comp238804_c0_seq1.mrna1;geneID=comp238804_c0_seq1.path1;Name=comp238804_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=436;mismatches=2;indels=0;unknowns=0;Target=comp238804_c0_seq1 438 1 .;CDS_Target=comp238804_c0_seq1 259 92 .;locus=RLOC_00002945
ChrX	stalkie_big_nohaplotig	exon	50630253	50630690	99	-	.	Parent=comp238804_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	50630432	50630599	.	-	0	Parent=comp238804_c0_seq1.mrna1
ChrX	gffcl	locus	50630882	50632237	.	-	.	ID=RLOC_00002946;geneIDs=FBgn0000964.1.path1;transcripts=FBgn0000964.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50630882	50632237	.	-	.	ID=FBgn0000964.1.mrna1;geneID=FBgn0000964.1.path1;Name=FBgn0000964.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1353;mismatches=3;indels=0;unknowns=0;Target=FBgn0000964.1 1356 1 .;locus=RLOC_00002946
ChrX	stalkie_big_nohaplotig	exon	50630882	50632237	99	-	.	Parent=FBgn0000964.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	50630882	50632237	.	-	0	Parent=FBgn0000964.1.mrna1
ChrX	gffcl	locus	50674398	50681290	.	+	.	ID=RLOC_00002947;geneIDs=FBgn0028902.1.path1;transcripts=FBgn0028902.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50674398	50681290	.	+	.	ID=FBgn0028902.1.mrna1;geneID=FBgn0028902.1.path1;Name=FBgn0028902.1;Dir=sensecoverage=100.0;identity=99.7;matches=1526;mismatches=4;indels=0;unknowns=0;locus=RLOC_00002947
ChrX	stalkie_big_nohaplotig	exon	50674398	50674466	95	+	.	Parent=FBgn0028902.1.mrna1;Target=FBgn0028902.1 1 69 +
ChrX	stalkie_big_nohaplotig	exon	50674528	50674596	100	+	.	Parent=FBgn0028902.1.mrna1;Target=FBgn0028902.1 70 138 +
ChrX	stalkie_big_nohaplotig	exon	50675962	50676236	100	+	.	Parent=FBgn0028902.1.mrna1;Target=FBgn0028902.1 139 413 +
ChrX	stalkie_big_nohaplotig	exon	50676308	50676534	100	+	.	Parent=FBgn0028902.1.mrna1;Target=FBgn0028902.1 414 640 +
ChrX	stalkie_big_nohaplotig	exon	50676611	50676905	100	+	.	Parent=FBgn0028902.1.mrna1;Target=FBgn0028902.1 641 935 +
ChrX	stalkie_big_nohaplotig	exon	50676963	50677038	100	+	.	Parent=FBgn0028902.1.mrna1;Target=FBgn0028902.1 936 1011 +
ChrX	stalkie_big_nohaplotig	exon	50679694	50679840	99	+	.	Parent=FBgn0028902.1.mrna1;Target=FBgn0028902.1 1012 1158 +
ChrX	stalkie_big_nohaplotig	exon	50680919	50681290	100	+	.	Parent=FBgn0028902.1.mrna1;Target=FBgn0028902.1 1159 1530 +
ChrX	stalkie_big_nohaplotig	CDS	50674398	50674466	.	+	0	Parent=FBgn0028902.1.mrna1;Target=FBgn0028902.1 1 69 +
ChrX	stalkie_big_nohaplotig	CDS	50674528	50674596	.	+	0	Parent=FBgn0028902.1.mrna1;Target=FBgn0028902.1 70 138 +
ChrX	stalkie_big_nohaplotig	CDS	50675962	50676236	.	+	0	Parent=FBgn0028902.1.mrna1;Target=FBgn0028902.1 139 413 +
ChrX	stalkie_big_nohaplotig	CDS	50676308	50676534	.	+	1	Parent=FBgn0028902.1.mrna1;Target=FBgn0028902.1 414 640 +
ChrX	stalkie_big_nohaplotig	CDS	50676611	50676905	.	+	2	Parent=FBgn0028902.1.mrna1;Target=FBgn0028902.1 641 935 +
ChrX	stalkie_big_nohaplotig	CDS	50676963	50677038	.	+	1	Parent=FBgn0028902.1.mrna1;Target=FBgn0028902.1 936 1011 +
ChrX	stalkie_big_nohaplotig	CDS	50679694	50679840	.	+	0	Parent=FBgn0028902.1.mrna1;Target=FBgn0028902.1 1012 1158 +
ChrX	stalkie_big_nohaplotig	CDS	50680919	50681290	.	+	0	Parent=FBgn0028902.1.mrna1;Target=FBgn0028902.1 1159 1530 +
ChrX	gffcl	locus	50682029	50685147	.	-	.	ID=RLOC_00002948;geneIDs=FBgn0032785.2.path1;transcripts=FBgn0032785.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50682029	50685147	.	-	.	ID=FBgn0032785.2.mrna1;geneID=FBgn0032785.2.path1;Name=FBgn0032785.2;Dir=sensecoverage=100.0;identity=100.0;matches=873;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002948
ChrX	stalkie_big_nohaplotig	exon	50682029	50682131	100	-	.	Parent=FBgn0032785.2.mrna1;Target=FBgn0032785.2 771 873 +
ChrX	stalkie_big_nohaplotig	exon	50684183	50684361	100	-	.	Parent=FBgn0032785.2.mrna1;Target=FBgn0032785.2 592 770 +
ChrX	stalkie_big_nohaplotig	exon	50684427	50684771	100	-	.	Parent=FBgn0032785.2.mrna1;Target=FBgn0032785.2 247 591 +
ChrX	stalkie_big_nohaplotig	exon	50684836	50684930	100	-	.	Parent=FBgn0032785.2.mrna1;Target=FBgn0032785.2 152 246 +
ChrX	stalkie_big_nohaplotig	exon	50684997	50685147	100	-	.	Parent=FBgn0032785.2.mrna1;Target=FBgn0032785.2 1 151 +
ChrX	stalkie_big_nohaplotig	CDS	50682029	50682131	.	-	1	Parent=FBgn0032785.2.mrna1;Target=FBgn0032785.2 771 873 +
ChrX	stalkie_big_nohaplotig	CDS	50684183	50684361	.	-	0	Parent=FBgn0032785.2.mrna1;Target=FBgn0032785.2 592 770 +
ChrX	stalkie_big_nohaplotig	CDS	50684427	50684771	.	-	0	Parent=FBgn0032785.2.mrna1;Target=FBgn0032785.2 247 591 +
ChrX	stalkie_big_nohaplotig	CDS	50684836	50684930	.	-	2	Parent=FBgn0032785.2.mrna1;Target=FBgn0032785.2 152 246 +
ChrX	stalkie_big_nohaplotig	CDS	50684997	50685147	.	-	0	Parent=FBgn0032785.2.mrna1;Target=FBgn0032785.2 1 151 +
ChrX	gffcl	locus	50691221	50692101	.	-	.	ID=RLOC_00002949;geneIDs=comp159849_c0_seq1.path1;transcripts=comp159849_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50691221	50692101	.	-	.	ID=comp159849_c0_seq1.mrna1;geneID=comp159849_c0_seq1.path1;Name=comp159849_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.6;matches=852;mismatches=15;indels=15;unknowns=0;Target=comp159849_c0_seq1 868 1 .;CDS_Target=comp159849_c0_seq1 604 284 .;locus=RLOC_00002949
ChrX	stalkie_big_nohaplotig	exon	50691221	50692101	96	-	.	Parent=comp159849_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	50691499	50691818	.	-	0	Parent=comp159849_c0_seq1.mrna1
ChrX	gffcl	locus	50693381	50694603	.	+	.	ID=RLOC_00002950;geneIDs=FBgn0032030.7.path2;transcripts=FBgn0032030.7.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	50693381	50694603	.	+	.	ID=FBgn0032030.7.mrna2;geneID=FBgn0032030.7.path2;Name=FBgn0032030.7;Dir=sensecoverage=100.0;identity=99.3;matches=1052;mismatches=7;indels=0;unknowns=0;locus=RLOC_00002950
ChrX	stalkie_big_nohaplotig	exon	50693381	50693475	100	+	.	Parent=FBgn0032030.7.mrna2;Target=FBgn0032030.7 1 95 +
ChrX	stalkie_big_nohaplotig	exon	50693640	50694603	99	+	.	Parent=FBgn0032030.7.mrna2;Target=FBgn0032030.7 96 1059 +
ChrX	stalkie_big_nohaplotig	CDS	50693381	50693475	.	+	0	Parent=FBgn0032030.7.mrna2;Target=FBgn0032030.7 1 95 +
ChrX	stalkie_big_nohaplotig	CDS	50693640	50694603	.	+	1	Parent=FBgn0032030.7.mrna2;Target=FBgn0032030.7 96 1059 +
ChrX	gffcl	locus	50731385	50741461	.	+	.	ID=RLOC_00002951;geneIDs=FBgn0031773.1.path1;transcripts=FBgn0031773.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50731385	50741461	.	+	.	ID=FBgn0031773.1.mrna1;geneID=FBgn0031773.1.path1;Name=FBgn0031773.1;Dir=sensecoverage=100.0;identity=100.0;matches=1998;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002951
ChrX	stalkie_big_nohaplotig	exon	50731385	50731667	100	+	.	Parent=FBgn0031773.1.mrna1;Target=FBgn0031773.1 1 283 +
ChrX	stalkie_big_nohaplotig	exon	50734192	50734349	100	+	.	Parent=FBgn0031773.1.mrna1;Target=FBgn0031773.1 284 441 +
ChrX	stalkie_big_nohaplotig	exon	50735795	50735972	100	+	.	Parent=FBgn0031773.1.mrna1;Target=FBgn0031773.1 442 619 +
ChrX	stalkie_big_nohaplotig	exon	50736047	50736345	100	+	.	Parent=FBgn0031773.1.mrna1;Target=FBgn0031773.1 620 918 +
ChrX	stalkie_big_nohaplotig	exon	50736416	50736940	100	+	.	Parent=FBgn0031773.1.mrna1;Target=FBgn0031773.1 919 1443 +
ChrX	stalkie_big_nohaplotig	exon	50737520	50737626	100	+	.	Parent=FBgn0031773.1.mrna1;Target=FBgn0031773.1 1444 1550 +
ChrX	stalkie_big_nohaplotig	exon	50738943	50739155	100	+	.	Parent=FBgn0031773.1.mrna1;Target=FBgn0031773.1 1551 1763 +
ChrX	stalkie_big_nohaplotig	exon	50741168	50741318	100	+	.	Parent=FBgn0031773.1.mrna1;Target=FBgn0031773.1 1764 1914 +
ChrX	stalkie_big_nohaplotig	exon	50741378	50741461	100	+	.	Parent=FBgn0031773.1.mrna1;Target=FBgn0031773.1 1915 1998 +
ChrX	stalkie_big_nohaplotig	CDS	50731385	50731667	.	+	0	Parent=FBgn0031773.1.mrna1;Target=FBgn0031773.1 1 283 +
ChrX	stalkie_big_nohaplotig	CDS	50734192	50734349	.	+	2	Parent=FBgn0031773.1.mrna1;Target=FBgn0031773.1 284 441 +
ChrX	stalkie_big_nohaplotig	CDS	50735795	50735972	.	+	0	Parent=FBgn0031773.1.mrna1;Target=FBgn0031773.1 442 619 +
ChrX	stalkie_big_nohaplotig	CDS	50736047	50736345	.	+	2	Parent=FBgn0031773.1.mrna1;Target=FBgn0031773.1 620 918 +
ChrX	stalkie_big_nohaplotig	CDS	50736416	50736940	.	+	0	Parent=FBgn0031773.1.mrna1;Target=FBgn0031773.1 919 1443 +
ChrX	stalkie_big_nohaplotig	CDS	50737520	50737626	.	+	0	Parent=FBgn0031773.1.mrna1;Target=FBgn0031773.1 1444 1550 +
ChrX	stalkie_big_nohaplotig	CDS	50738943	50739155	.	+	1	Parent=FBgn0031773.1.mrna1;Target=FBgn0031773.1 1551 1763 +
ChrX	stalkie_big_nohaplotig	CDS	50741168	50741318	.	+	1	Parent=FBgn0031773.1.mrna1;Target=FBgn0031773.1 1764 1914 +
ChrX	stalkie_big_nohaplotig	CDS	50741378	50741461	.	+	0	Parent=FBgn0031773.1.mrna1;Target=FBgn0031773.1 1915 1998 +
ChrX	gffcl	locus	50748363	50750206	.	+	.	ID=RLOC_00002952;geneIDs=FBgn0031771.1.path1;transcripts=FBgn0031771.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50748363	50750206	.	+	.	ID=FBgn0031771.1.mrna1;geneID=FBgn0031771.1.path1;Name=FBgn0031771.1;Dir=sensecoverage=100.0;identity=99.9;matches=1484;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002952
ChrX	stalkie_big_nohaplotig	exon	50748363	50748465	99	+	.	Parent=FBgn0031771.1.mrna1;Target=FBgn0031771.1 1 103 +
ChrX	stalkie_big_nohaplotig	exon	50748696	50749049	100	+	.	Parent=FBgn0031771.1.mrna1;Target=FBgn0031771.1 104 457 +
ChrX	stalkie_big_nohaplotig	exon	50749111	50749945	100	+	.	Parent=FBgn0031771.1.mrna1;Target=FBgn0031771.1 458 1292 +
ChrX	stalkie_big_nohaplotig	exon	50750014	50750206	100	+	.	Parent=FBgn0031771.1.mrna1;Target=FBgn0031771.1 1293 1485 +
ChrX	stalkie_big_nohaplotig	CDS	50748363	50748465	.	+	0	Parent=FBgn0031771.1.mrna1;Target=FBgn0031771.1 1 103 +
ChrX	stalkie_big_nohaplotig	CDS	50748696	50749049	.	+	2	Parent=FBgn0031771.1.mrna1;Target=FBgn0031771.1 104 457 +
ChrX	stalkie_big_nohaplotig	CDS	50749111	50749945	.	+	2	Parent=FBgn0031771.1.mrna1;Target=FBgn0031771.1 458 1292 +
ChrX	stalkie_big_nohaplotig	CDS	50750014	50750206	.	+	1	Parent=FBgn0031771.1.mrna1;Target=FBgn0031771.1 1293 1485 +
ChrX	gffcl	locus	50752776	50753292	.	-	.	ID=RLOC_00002953;geneIDs=comp119313_c0_seq1.path1;transcripts=comp119313_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50752776	50753292	.	-	.	ID=comp119313_c0_seq1.mrna1;geneID=comp119313_c0_seq1.path1;Name=comp119313_c0_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=454;mismatches=3;indels=1;unknowns=0;locus=RLOC_00002953
ChrX	stalkie_big_nohaplotig	exon	50752776	50753037	98	-	.	Parent=comp119313_c0_seq1.mrna1;Target=comp119313_c0_seq1 1 263 -
ChrX	stalkie_big_nohaplotig	exon	50753098	50753292	100	-	.	Parent=comp119313_c0_seq1.mrna1;Target=comp119313_c0_seq1 264 458 -
ChrX	stalkie_big_nohaplotig	CDS	50752921	50753037	.	-	1	Parent=comp119313_c0_seq1.mrna1;Target=comp119313_c0_seq1 146 263 .
ChrX	stalkie_big_nohaplotig	CDS	50753098	50753183	.	-	0	Parent=comp119313_c0_seq1.mrna1;Target=comp119313_c0_seq1 264 349 .
ChrX	gffcl	locus	50838197	50838883	.	+	.	ID=RLOC_00002954;geneIDs=comp149388_c0_seq1.path1;transcripts=comp149388_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50838197	50838883	.	+	.	ID=comp149388_c0_seq1.mrna1;geneID=comp149388_c0_seq1.path1;Name=comp149388_c0_seq1;Dir=indeterminatecoverage=96.7;identity=97.2;matches=453;mismatches=13;indels=0;unknowns=0;Target=comp149388_c0_seq1 211 95 .;locus=RLOC_00002954
ChrX	stalkie_big_nohaplotig	exon	50838197	50838568	99	+	.	Parent=comp149388_c0_seq1.mrna1;Target=comp149388_c0_seq1 372 1 .
ChrX	stalkie_big_nohaplotig	exon	50838790	50838883	88	+	.	Parent=comp149388_c0_seq1.mrna1;Target=comp149388_c0_seq1 466 373 .
ChrX	stalkie_big_nohaplotig	CDS	50838291	50838407	.	+	0	Parent=comp149388_c0_seq1.mrna1
ChrX	gffcl	locus	50838939	50839680	.	-	.	ID=RLOC_00002955;geneIDs=comp153017_c0_seq1.path1;transcripts=comp153017_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50838939	50839680	.	-	.	ID=comp153017_c0_seq1.mrna1;geneID=comp153017_c0_seq1.path1;Name=comp153017_c0_seq1;Dir=indeterminatecoverage=98.9;identity=98.7;matches=732;mismatches=10;indels=0;unknowns=0;Target=comp153017_c0_seq1 749 8 .;CDS_Target=comp153017_c0_seq1 486 379 .;locus=RLOC_00002955
ChrX	stalkie_big_nohaplotig	exon	50838939	50839680	98	-	.	Parent=comp153017_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	50839202	50839309	.	-	0	Parent=comp153017_c0_seq1.mrna1
ChrX	gffcl	locus	50839685	50840132	.	-	.	ID=RLOC_00002956;geneIDs=comp141303_c0_seq1.path1;transcripts=comp141303_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50839685	50840132	.	-	.	ID=comp141303_c0_seq1.mrna1;geneID=comp141303_c0_seq1.path1;Name=comp141303_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=447;mismatches=1;indels=0;unknowns=0;Target=comp141303_c0_seq1 449 2 .;CDS_Target=comp141303_c0_seq1 125 75 .;locus=RLOC_00002956
ChrX	stalkie_big_nohaplotig	exon	50839685	50840132	99	-	.	Parent=comp141303_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	50840009	50840059	.	-	0	Parent=comp141303_c0_seq1.mrna1
ChrX	gffcl	locus	50841008	50841229	.	+	.	ID=RLOC_00002957;geneIDs=comp137248_c0_seq1.path1;transcripts=comp137248_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50841008	50841229	.	+	.	ID=comp137248_c0_seq1.mrna1;geneID=comp137248_c0_seq1.path1;Name=comp137248_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=219;mismatches=3;indels=0;unknowns=0;Target=comp137248_c0_seq1 222 1 .;CDS_Target=comp137248_c0_seq1 221 3 .;locus=RLOC_00002957
ChrX	stalkie_big_nohaplotig	exon	50841008	50841229	98	+	.	Parent=comp137248_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	50841010	50841228	.	+	0	Parent=comp137248_c0_seq1.mrna1
ChrX	gffcl	locus	50854645	50855048	.	+	.	ID=RLOC_00002958;geneIDs=comp149969_c0_seq1.path1;transcripts=comp149969_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50854645	50855048	.	+	.	ID=comp149969_c0_seq1.mrna1;geneID=comp149969_c0_seq1.path1;Name=comp149969_c0_seq1;Dir=indeterminatecoverage=98.8;identity=97.8;matches=395;mismatches=9;indels=0;unknowns=0;Target=comp149969_c0_seq1 409 6 .;CDS_Target=comp149969_c0_seq1 408 313 .;locus=RLOC_00002958
ChrX	stalkie_big_nohaplotig	exon	50854645	50855048	97	+	.	Parent=comp149969_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	50854952	50855047	.	+	0	Parent=comp149969_c0_seq1.mrna1
ChrX	gffcl	locus	50859732	50866881	.	-	.	ID=RLOC_00002959;geneIDs=FBgn0031769.1.path1;transcripts=FBgn0031769.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50859732	50866881	.	-	.	ID=FBgn0031769.1.mrna1;geneID=FBgn0031769.1.path1;Name=FBgn0031769.1;Dir=sensecoverage=100.0;identity=100.0;matches=1455;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002959
ChrX	stalkie_big_nohaplotig	exon	50859732	50860006	100	-	.	Parent=FBgn0031769.1.mrna1;Target=FBgn0031769.1 1181 1455 +
ChrX	stalkie_big_nohaplotig	exon	50860079	50860337	100	-	.	Parent=FBgn0031769.1.mrna1;Target=FBgn0031769.1 922 1180 +
ChrX	stalkie_big_nohaplotig	exon	50861795	50862373	100	-	.	Parent=FBgn0031769.1.mrna1;Target=FBgn0031769.1 343 921 +
ChrX	stalkie_big_nohaplotig	exon	50866540	50866881	100	-	.	Parent=FBgn0031769.1.mrna1;Target=FBgn0031769.1 1 342 +
ChrX	stalkie_big_nohaplotig	CDS	50859732	50860006	.	-	2	Parent=FBgn0031769.1.mrna1;Target=FBgn0031769.1 1181 1455 +
ChrX	stalkie_big_nohaplotig	CDS	50860079	50860337	.	-	0	Parent=FBgn0031769.1.mrna1;Target=FBgn0031769.1 922 1180 +
ChrX	stalkie_big_nohaplotig	CDS	50861795	50862373	.	-	0	Parent=FBgn0031769.1.mrna1;Target=FBgn0031769.1 343 921 +
ChrX	stalkie_big_nohaplotig	CDS	50866540	50866881	.	-	0	Parent=FBgn0031769.1.mrna1;Target=FBgn0031769.1 1 342 +
ChrX	gffcl	locus	50872738	50873430	.	+	.	ID=RLOC_00002960;geneIDs=comp58728_c0_seq1.path1;transcripts=comp58728_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50872738	50873430	.	+	.	ID=comp58728_c0_seq1.mrna1;geneID=comp58728_c0_seq1.path1;Name=comp58728_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.7;matches=691;mismatches=2;indels=0;unknowns=0;Target=comp58728_c0_seq1 694 2 .;CDS_Target=comp58728_c0_seq1 418 161 .;locus=RLOC_00002960
ChrX	stalkie_big_nohaplotig	exon	50872738	50873430	99	+	.	Parent=comp58728_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	50872897	50873154	.	+	0	Parent=comp58728_c0_seq1.mrna1
ChrX	gffcl	locus	50873589	50880838	.	-	.	ID=RLOC_00002961;geneIDs=comp129925_c0_seq1.path1;transcripts=comp129925_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50873589	50880838	.	-	.	ID=comp129925_c0_seq1.mrna1;geneID=comp129925_c0_seq1.path1;Name=comp129925_c0_seq1;Dir=sensecoverage=98.6;identity=99.7;matches=356;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002961
ChrX	stalkie_big_nohaplotig	exon	50873589	50873814	99	-	.	Parent=comp129925_c0_seq1.mrna1;Target=comp129925_c0_seq1 137 362 +
ChrX	stalkie_big_nohaplotig	exon	50880708	50880838	100	-	.	Parent=comp129925_c0_seq1.mrna1;Target=comp129925_c0_seq1 6 136 +
ChrX	stalkie_big_nohaplotig	CDS	50873810	50873814	.	-	2	Parent=comp129925_c0_seq1.mrna1;Target=comp129925_c0_seq1 137 141 +
ChrX	stalkie_big_nohaplotig	CDS	50880708	50880837	.	-	0	Parent=comp129925_c0_seq1.mrna1;Target=comp129925_c0_seq1 7 136 +
ChrX	gffcl	locus	50885528	50892608	.	+	.	ID=RLOC_00002962;geneIDs=ORF1505.path1,comp163505_c0_seq1.path1;transcripts=comp163505_c0_seq1.mrna1,ORF1505.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50885528	50887454	.	+	.	ID=comp163505_c0_seq1.mrna1;geneID=comp163505_c0_seq1.path1;Name=comp163505_c0_seq1;Dir=sensecoverage=99.9;identity=97.3;matches=1815;mismatches=50;indels=1;unknowns=0;Target=comp163505_c0_seq1 253 1317 +;locus=RLOC_00002962
ChrX	stalkie_big_nohaplotig	exon	50885528	50885718	99	+	.	Parent=comp163505_c0_seq1.mrna1;Target=comp163505_c0_seq1 1 191 +
ChrX	stalkie_big_nohaplotig	exon	50885781	50887454	97	+	.	Parent=comp163505_c0_seq1.mrna1;Target=comp163505_c0_seq1 192 1866 +
ChrX	stalkie_big_nohaplotig	CDS	50885842	50886905	.	+	0	Parent=comp163505_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50885824	50892608	.	+	.	ID=ORF1505.mrna1;geneID=ORF1505.path1;Name=ORF1505;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1068;mismatches=12;indels=0;unknowns=0;locus=RLOC_00002962
ChrX	stalkie_big_nohaplotig	exon	50885824	50886855	98	+	.	Parent=ORF1505.mrna1;Target=ORF1505 1032 1 .
ChrX	stalkie_big_nohaplotig	exon	50892561	50892608	100	+	.	Parent=ORF1505.mrna1;Target=ORF1505 1080 1033 .
ChrX	stalkie_big_nohaplotig	CDS	50885824	50886855	.	+	0	Parent=ORF1505.mrna1;Target=ORF1505 1032 1 .
ChrX	stalkie_big_nohaplotig	CDS	50892561	50892608	.	+	0	Parent=ORF1505.mrna1;Target=ORF1505 1080 1033 .
ChrX	gffcl	locus	50898446	50901048	.	-	.	ID=RLOC_00002963;geneIDs=FBgn0037703.1.path1;transcripts=FBgn0037703.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50898446	50901048	.	-	.	ID=FBgn0037703.1.mrna1;geneID=FBgn0037703.1.path1;Name=FBgn0037703.1;Dir=sensecoverage=100.0;identity=100.0;matches=2406;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002963
ChrX	stalkie_big_nohaplotig	exon	50898446	50900406	100	-	.	Parent=FBgn0037703.1.mrna1;Target=FBgn0037703.1 446 2406 +
ChrX	stalkie_big_nohaplotig	exon	50900546	50900758	100	-	.	Parent=FBgn0037703.1.mrna1;Target=FBgn0037703.1 233 445 +
ChrX	stalkie_big_nohaplotig	exon	50900817	50901048	100	-	.	Parent=FBgn0037703.1.mrna1;Target=FBgn0037703.1 1 232 +
ChrX	stalkie_big_nohaplotig	CDS	50898446	50900406	.	-	2	Parent=FBgn0037703.1.mrna1;Target=FBgn0037703.1 446 2406 +
ChrX	stalkie_big_nohaplotig	CDS	50900546	50900758	.	-	2	Parent=FBgn0037703.1.mrna1;Target=FBgn0037703.1 233 445 +
ChrX	stalkie_big_nohaplotig	CDS	50900817	50901048	.	-	0	Parent=FBgn0037703.1.mrna1;Target=FBgn0037703.1 1 232 +
ChrX	gffcl	locus	50903210	50903854	.	-	.	ID=RLOC_00002964;geneIDs=comp144663_c1_seq1.path1;transcripts=comp144663_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50903210	50903854	.	-	.	ID=comp144663_c1_seq1.mrna1;geneID=comp144663_c1_seq1.path1;Name=comp144663_c1_seq1;Dir=indeterminatecoverage=99.5;identity=99.5;matches=645;mismatches=0;indels=3;unknowns=0;Target=comp144663_c1_seq1 648 1 .;CDS_Target=comp144663_c1_seq1 278 141 .;locus=RLOC_00002964
ChrX	stalkie_big_nohaplotig	exon	50903210	50903854	99	-	.	Parent=comp144663_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	50903580	50903717	.	-	0	Parent=comp144663_c1_seq1.mrna1
ChrX	gffcl	locus	50906311	50906982	.	+	.	ID=RLOC_00002965;geneIDs=FBgn0029161.1.path1;transcripts=FBgn0029161.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50906311	50906982	.	+	.	ID=FBgn0029161.1.mrna1;geneID=FBgn0029161.1.path1;Name=FBgn0029161.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=672;mismatches=0;indels=0;unknowns=0;Target=FBgn0029161.1 672 1 .;locus=RLOC_00002965
ChrX	stalkie_big_nohaplotig	exon	50906311	50906982	100	+	.	Parent=FBgn0029161.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	50906311	50906982	.	+	0	Parent=FBgn0029161.1.mrna1
ChrX	gffcl	locus	50914856	50921489	.	+	.	ID=RLOC_00002966;geneIDs=FBgn0000052.1.path1;transcripts=FBgn0000052.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50914856	50921489	.	+	.	ID=FBgn0000052.1.mrna1;geneID=FBgn0000052.1.path1;Name=FBgn0000052.1;Dir=sensecoverage=100.0;identity=99.9;matches=3627;mismatches=2;indels=1;unknowns=0;Target=FBgn0000052.1 3 50 +;locus=RLOC_00002966
ChrX	stalkie_big_nohaplotig	exon	50914856	50915417	99	+	.	Parent=FBgn0000052.1.mrna1;Target=FBgn0000052.1 1 563 +
ChrX	stalkie_big_nohaplotig	exon	50916654	50916733	100	+	.	Parent=FBgn0000052.1.mrna1;Target=FBgn0000052.1 564 643 +
ChrX	stalkie_big_nohaplotig	exon	50917016	50917276	100	+	.	Parent=FBgn0000052.1.mrna1;Target=FBgn0000052.1 644 904 +
ChrX	stalkie_big_nohaplotig	exon	50917666	50917880	100	+	.	Parent=FBgn0000052.1.mrna1;Target=FBgn0000052.1 905 1119 +
ChrX	stalkie_big_nohaplotig	exon	50917943	50918588	100	+	.	Parent=FBgn0000052.1.mrna1;Target=FBgn0000052.1 1120 1765 +
ChrX	stalkie_big_nohaplotig	exon	50918765	50919913	100	+	.	Parent=FBgn0000052.1.mrna1;Target=FBgn0000052.1 1766 2914 +
ChrX	stalkie_big_nohaplotig	exon	50920774	50921489	99	+	.	Parent=FBgn0000052.1.mrna1;Target=FBgn0000052.1 2915 3630 +
ChrX	stalkie_big_nohaplotig	CDS	50914858	50914904	.	+	0	Parent=FBgn0000052.1.mrna1
ChrX	gffcl	locus	50921763	50928650	.	-	.	ID=RLOC_00002967;geneIDs=FBgn0051643.1.path1;transcripts=FBgn0051643.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50921763	50928650	.	-	.	ID=FBgn0051643.1.mrna1;geneID=FBgn0051643.1.path1;Name=FBgn0051643.1;Dir=sensecoverage=100.0;identity=99.9;matches=2800;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002967
ChrX	stalkie_big_nohaplotig	exon	50921763	50921967	100	-	.	Parent=FBgn0051643.1.mrna1;Target=FBgn0051643.1 2598 2802 +
ChrX	stalkie_big_nohaplotig	exon	50922023	50922105	100	-	.	Parent=FBgn0051643.1.mrna1;Target=FBgn0051643.1 2515 2597 +
ChrX	stalkie_big_nohaplotig	exon	50923210	50923319	100	-	.	Parent=FBgn0051643.1.mrna1;Target=FBgn0051643.1 2405 2514 +
ChrX	stalkie_big_nohaplotig	exon	50923385	50923508	99	-	.	Parent=FBgn0051643.1.mrna1;Target=FBgn0051643.1 2281 2404 +
ChrX	stalkie_big_nohaplotig	exon	50924456	50924606	100	-	.	Parent=FBgn0051643.1.mrna1;Target=FBgn0051643.1 2130 2280 +
ChrX	stalkie_big_nohaplotig	exon	50925468	50925747	100	-	.	Parent=FBgn0051643.1.mrna1;Target=FBgn0051643.1 1850 2129 +
ChrX	stalkie_big_nohaplotig	exon	50926689	50926840	100	-	.	Parent=FBgn0051643.1.mrna1;Target=FBgn0051643.1 1698 1849 +
ChrX	stalkie_big_nohaplotig	exon	50926903	50928212	99	-	.	Parent=FBgn0051643.1.mrna1;Target=FBgn0051643.1 388 1697 +
ChrX	stalkie_big_nohaplotig	exon	50928264	50928650	100	-	.	Parent=FBgn0051643.1.mrna1;Target=FBgn0051643.1 1 387 +
ChrX	stalkie_big_nohaplotig	CDS	50921763	50921967	.	-	1	Parent=FBgn0051643.1.mrna1;Target=FBgn0051643.1 2598 2802 +
ChrX	stalkie_big_nohaplotig	CDS	50922023	50922105	.	-	0	Parent=FBgn0051643.1.mrna1;Target=FBgn0051643.1 2515 2597 +
ChrX	stalkie_big_nohaplotig	CDS	50923210	50923319	.	-	2	Parent=FBgn0051643.1.mrna1;Target=FBgn0051643.1 2405 2514 +
ChrX	stalkie_big_nohaplotig	CDS	50923385	50923508	.	-	0	Parent=FBgn0051643.1.mrna1;Target=FBgn0051643.1 2281 2404 +
ChrX	stalkie_big_nohaplotig	CDS	50924456	50924606	.	-	1	Parent=FBgn0051643.1.mrna1;Target=FBgn0051643.1 2130 2280 +
ChrX	stalkie_big_nohaplotig	CDS	50925468	50925747	.	-	2	Parent=FBgn0051643.1.mrna1;Target=FBgn0051643.1 1850 2129 +
ChrX	stalkie_big_nohaplotig	CDS	50926689	50926840	.	-	1	Parent=FBgn0051643.1.mrna1;Target=FBgn0051643.1 1698 1849 +
ChrX	stalkie_big_nohaplotig	CDS	50926903	50928212	.	-	0	Parent=FBgn0051643.1.mrna1;Target=FBgn0051643.1 388 1697 +
ChrX	stalkie_big_nohaplotig	CDS	50928264	50928650	.	-	0	Parent=FBgn0051643.1.mrna1;Target=FBgn0051643.1 1 387 +
ChrX	gffcl	locus	50929020	50933076	.	+	.	ID=RLOC_00002968;geneIDs=FBgn0025742.1.path1;transcripts=FBgn0025742.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	50929020	50933076	.	+	.	ID=FBgn0025742.1.mrna1;geneID=FBgn0025742.1.path1;Name=FBgn0025742.1;Dir=sensecoverage=100.0;identity=99.9;matches=2047;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002968
ChrX	stalkie_big_nohaplotig	exon	50929020	50930748	99	+	.	Parent=FBgn0025742.1.mrna1;Target=FBgn0025742.1 1 1729 +
ChrX	stalkie_big_nohaplotig	exon	50932757	50933076	100	+	.	Parent=FBgn0025742.1.mrna1;Target=FBgn0025742.1 1730 2049 +
ChrX	stalkie_big_nohaplotig	CDS	50929020	50930748	.	+	0	Parent=FBgn0025742.1.mrna1;Target=FBgn0025742.1 1 1729 +
ChrX	stalkie_big_nohaplotig	CDS	50932757	50933076	.	+	2	Parent=FBgn0025742.1.mrna1;Target=FBgn0025742.1 1730 2049 +
ChrX	stalkie_big_nohaplotig	mRNA	50953623	50954135	.	+	.	ID=comp149755_c0_seq1.mrna1;geneID=comp149755_c0_seq1.path1;Name=comp149755_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.2;matches=509;mismatches=1;indels=3;unknowns=0;Target=comp149755_c0_seq1 511 2 .;CDS_Target=comp149755_c0_seq1 144 4 .;locus=RLOC_00002969
ChrX	stalkie_big_nohaplotig	exon	50953623	50954135	99	+	.	Parent=comp149755_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	50953625	50953768	.	+	0	Parent=comp149755_c0_seq1.mrna1
ChrX	gffcl	locus	51000860	51002074	.	+	.	ID=RLOC_00002970;geneIDs=FBgn0032030.7.path1;transcripts=FBgn0032030.7.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51000860	51002074	.	+	.	ID=FBgn0032030.7.mrna1;geneID=FBgn0032030.7.path1;Name=FBgn0032030.7;Dir=sensecoverage=100.0;identity=99.4;matches=1053;mismatches=6;indels=0;unknowns=0;locus=RLOC_00002970
ChrX	stalkie_big_nohaplotig	exon	51000860	51000954	100	+	.	Parent=FBgn0032030.7.mrna1;Target=FBgn0032030.7 1 95 +
ChrX	stalkie_big_nohaplotig	exon	51001111	51002074	99	+	.	Parent=FBgn0032030.7.mrna1;Target=FBgn0032030.7 96 1059 +
ChrX	stalkie_big_nohaplotig	CDS	51000860	51000954	.	+	0	Parent=FBgn0032030.7.mrna1;Target=FBgn0032030.7 1 95 +
ChrX	stalkie_big_nohaplotig	CDS	51001111	51002074	.	+	1	Parent=FBgn0032030.7.mrna1;Target=FBgn0032030.7 96 1059 +
ChrX	gffcl	locus	51007256	51007278	.	-	.	ID=RLOC_00002971;geneIDs=comp264777_c0_seq1.path1;transcripts=comp264777_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51007256	51007278	.	-	.	ID=comp264777_c0_seq1.mrna1;geneID=comp264777_c0_seq1.path1;Name=comp264777_c0_seq1;Dir=indeterminatecoverage=7.0;identity=95.7;matches=22;mismatches=1;indels=0;unknowns=0;Target=comp264777_c0_seq1 152 130 .;locus=RLOC_00002971
ChrX	stalkie_big_nohaplotig	exon	51007256	51007278	95	-	.	Parent=comp264777_c0_seq1.mrna1
ChrX	gffcl	locus	51035025	51076949	.	+	.	ID=RLOC_00002972;geneIDs=FBgn0001170.1.path1;transcripts=FBgn0001170.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51035025	51076949	.	+	.	ID=FBgn0001170.1.mrna1;geneID=FBgn0001170.1.path1;Name=FBgn0001170.1;Dir=sensecoverage=100.0;identity=99.6;matches=1673;mismatches=7;indels=0;unknowns=0;locus=RLOC_00002972
ChrX	stalkie_big_nohaplotig	exon	51035025	51035880	99	+	.	Parent=FBgn0001170.1.mrna1;Target=FBgn0001170.1 1 856 +
ChrX	stalkie_big_nohaplotig	exon	51076074	51076654	99	+	.	Parent=FBgn0001170.1.mrna1;Target=FBgn0001170.1 857 1437 +
ChrX	stalkie_big_nohaplotig	exon	51076707	51076949	100	+	.	Parent=FBgn0001170.1.mrna1;Target=FBgn0001170.1 1438 1680 +
ChrX	stalkie_big_nohaplotig	CDS	51035025	51035880	.	+	0	Parent=FBgn0001170.1.mrna1;Target=FBgn0001170.1 1 856 +
ChrX	stalkie_big_nohaplotig	CDS	51076074	51076654	.	+	2	Parent=FBgn0001170.1.mrna1;Target=FBgn0001170.1 857 1437 +
ChrX	stalkie_big_nohaplotig	CDS	51076707	51076949	.	+	0	Parent=FBgn0001170.1.mrna1;Target=FBgn0001170.1 1438 1680 +
ChrX	gffcl	locus	51078468	51079802	.	+	.	ID=RLOC_00002973;geneIDs=comp142109_c0_seq1.path1;transcripts=comp142109_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51078468	51079802	.	+	.	ID=comp142109_c0_seq1.mrna1;geneID=comp142109_c0_seq1.path1;Name=comp142109_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=623;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002973
ChrX	stalkie_big_nohaplotig	exon	51078468	51078616	100	+	.	Parent=comp142109_c0_seq1.mrna1;Target=comp142109_c0_seq1 475 623 -
ChrX	stalkie_big_nohaplotig	exon	51079329	51079802	100	+	.	Parent=comp142109_c0_seq1.mrna1;Target=comp142109_c0_seq1 1 474 -
ChrX	stalkie_big_nohaplotig	CDS	51078582	51078616	.	+	0	Parent=comp142109_c0_seq1.mrna1;Target=comp142109_c0_seq1 475 509 .
ChrX	stalkie_big_nohaplotig	CDS	51079329	51079389	.	+	1	Parent=comp142109_c0_seq1.mrna1;Target=comp142109_c0_seq1 414 474 .
ChrX	gffcl	locus	51082732	51097183	.	+	.	ID=RLOC_00002974;geneIDs=FBgn0031762.1.path1;transcripts=FBgn0031762.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51082732	51097183	.	+	.	ID=FBgn0031762.1.mrna1;geneID=FBgn0031762.1.path1;Name=FBgn0031762.1;Dir=sensecoverage=100.0;identity=99.7;matches=3159;mismatches=9;indels=0;unknowns=0;locus=RLOC_00002974
ChrX	stalkie_big_nohaplotig	exon	51082732	51082819	100	+	.	Parent=FBgn0031762.1.mrna1;Target=FBgn0031762.1 1 88 +
ChrX	stalkie_big_nohaplotig	exon	51082948	51083070	100	+	.	Parent=FBgn0031762.1.mrna1;Target=FBgn0031762.1 89 211 +
ChrX	stalkie_big_nohaplotig	exon	51083138	51083296	99	+	.	Parent=FBgn0031762.1.mrna1;Target=FBgn0031762.1 212 370 +
ChrX	stalkie_big_nohaplotig	exon	51086565	51086751	100	+	.	Parent=FBgn0031762.1.mrna1;Target=FBgn0031762.1 371 557 +
ChrX	stalkie_big_nohaplotig	exon	51090246	51090651	100	+	.	Parent=FBgn0031762.1.mrna1;Target=FBgn0031762.1 558 963 +
ChrX	stalkie_big_nohaplotig	exon	51093164	51093266	100	+	.	Parent=FBgn0031762.1.mrna1;Target=FBgn0031762.1 964 1066 +
ChrX	stalkie_big_nohaplotig	exon	51093344	51094452	99	+	.	Parent=FBgn0031762.1.mrna1;Target=FBgn0031762.1 1067 2175 +
ChrX	stalkie_big_nohaplotig	exon	51094555	51095001	100	+	.	Parent=FBgn0031762.1.mrna1;Target=FBgn0031762.1 2176 2622 +
ChrX	stalkie_big_nohaplotig	exon	51095070	51095476	100	+	.	Parent=FBgn0031762.1.mrna1;Target=FBgn0031762.1 2623 3029 +
ChrX	stalkie_big_nohaplotig	exon	51097045	51097183	99	+	.	Parent=FBgn0031762.1.mrna1;Target=FBgn0031762.1 3030 3168 +
ChrX	stalkie_big_nohaplotig	CDS	51082732	51082819	.	+	0	Parent=FBgn0031762.1.mrna1;Target=FBgn0031762.1 1 88 +
ChrX	stalkie_big_nohaplotig	CDS	51082948	51083070	.	+	2	Parent=FBgn0031762.1.mrna1;Target=FBgn0031762.1 89 211 +
ChrX	stalkie_big_nohaplotig	CDS	51083138	51083296	.	+	2	Parent=FBgn0031762.1.mrna1;Target=FBgn0031762.1 212 370 +
ChrX	stalkie_big_nohaplotig	CDS	51086565	51086751	.	+	2	Parent=FBgn0031762.1.mrna1;Target=FBgn0031762.1 371 557 +
ChrX	stalkie_big_nohaplotig	CDS	51090246	51090651	.	+	1	Parent=FBgn0031762.1.mrna1;Target=FBgn0031762.1 558 963 +
ChrX	stalkie_big_nohaplotig	CDS	51093164	51093266	.	+	0	Parent=FBgn0031762.1.mrna1;Target=FBgn0031762.1 964 1066 +
ChrX	stalkie_big_nohaplotig	CDS	51093344	51094452	.	+	2	Parent=FBgn0031762.1.mrna1;Target=FBgn0031762.1 1067 2175 +
ChrX	stalkie_big_nohaplotig	CDS	51094555	51095001	.	+	0	Parent=FBgn0031762.1.mrna1;Target=FBgn0031762.1 2176 2622 +
ChrX	stalkie_big_nohaplotig	CDS	51095070	51095476	.	+	0	Parent=FBgn0031762.1.mrna1;Target=FBgn0031762.1 2623 3029 +
ChrX	stalkie_big_nohaplotig	CDS	51097045	51097183	.	+	1	Parent=FBgn0031762.1.mrna1;Target=FBgn0031762.1 3030 3168 +
ChrX	gffcl	locus	51097881	51098679	.	-	.	ID=RLOC_00002975;geneIDs=comp157565_c0_seq1.path1;transcripts=comp157565_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51097881	51098679	.	-	.	ID=comp157565_c0_seq1.mrna1;geneID=comp157565_c0_seq1.path1;Name=comp157565_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.2;matches=781;mismatches=18;indels=21;unknowns=0;Target=comp157565_c0_seq1 820 1 .;CDS_Target=comp157565_c0_seq1 67 2 .;locus=RLOC_00002975
ChrX	stalkie_big_nohaplotig	exon	51097881	51098679	95	-	.	Parent=comp157565_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51098623	51098678	.	-	0	Parent=comp157565_c0_seq1.mrna1
ChrX	gffcl	locus	51099116	51099856	.	+	.	ID=RLOC_00002976;geneIDs=comp157320_c0_seq1.path1;transcripts=comp157320_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51099116	51099856	.	+	.	ID=comp157320_c0_seq1.mrna1;geneID=comp157320_c0_seq1.path1;Name=comp157320_c0_seq1;Dir=indeterminatecoverage=98.2;identity=93.3;matches=697;mismatches=16;indels=34;unknowns=0;Target=comp157320_c0_seq1 732 14 .;CDS_Target=comp157320_c0_seq1 195 124 .;locus=RLOC_00002976
ChrX	stalkie_big_nohaplotig	exon	51099116	51099856	93	+	.	Parent=comp157320_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51099226	51099325	.	+	0	Parent=comp157320_c0_seq1.mrna1
ChrX	gffcl	locus	51103470	51114987	.	+	.	ID=RLOC_00002977;geneIDs=FBgn0001089.1.path1;transcripts=FBgn0001089.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51103470	51114987	.	+	.	ID=FBgn0001089.1.mrna1;geneID=FBgn0001089.1.path1;Name=FBgn0001089.1;Dir=sensecoverage=100.0;identity=99.9;matches=1958;mismatches=0;indels=1;unknowns=0;locus=RLOC_00002977
ChrX	stalkie_big_nohaplotig	exon	51103470	51103589	100	+	.	Parent=FBgn0001089.1.mrna1;Target=FBgn0001089.1 1 120 +
ChrX	stalkie_big_nohaplotig	exon	51112007	51112164	100	+	.	Parent=FBgn0001089.1.mrna1;Target=FBgn0001089.1 121 278 +
ChrX	stalkie_big_nohaplotig	exon	51112713	51112863	100	+	.	Parent=FBgn0001089.1.mrna1;Target=FBgn0001089.1 279 429 +
ChrX	stalkie_big_nohaplotig	exon	51112937	51113279	100	+	.	Parent=FBgn0001089.1.mrna1;Target=FBgn0001089.1 430 772 +
ChrX	stalkie_big_nohaplotig	exon	51113351	51113498	100	+	.	Parent=FBgn0001089.1.mrna1;Target=FBgn0001089.1 773 920 +
ChrX	stalkie_big_nohaplotig	exon	51113950	51114987	99	+	.	Parent=FBgn0001089.1.mrna1;Target=FBgn0001089.1 921 1959 +
ChrX	stalkie_big_nohaplotig	CDS	51103470	51103589	.	+	0	Parent=FBgn0001089.1.mrna1;Target=FBgn0001089.1 1 120 +
ChrX	stalkie_big_nohaplotig	CDS	51112007	51112164	.	+	0	Parent=FBgn0001089.1.mrna1;Target=FBgn0001089.1 121 278 +
ChrX	stalkie_big_nohaplotig	CDS	51112713	51112863	.	+	1	Parent=FBgn0001089.1.mrna1;Target=FBgn0001089.1 279 429 +
ChrX	stalkie_big_nohaplotig	CDS	51112937	51113279	.	+	0	Parent=FBgn0001089.1.mrna1;Target=FBgn0001089.1 430 772 +
ChrX	stalkie_big_nohaplotig	CDS	51113351	51113498	.	+	2	Parent=FBgn0001089.1.mrna1;Target=FBgn0001089.1 773 920 +
ChrX	stalkie_big_nohaplotig	CDS	51113950	51114987	.	+	1	Parent=FBgn0001089.1.mrna1;Target=FBgn0001089.1 921 1959 +
ChrX	gffcl	locus	51118836	51119269	.	-	.	ID=RLOC_00002978;geneIDs=comp144597_c0_seq1.path1;transcripts=comp144597_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51118836	51119269	.	-	.	ID=comp144597_c0_seq1.mrna1;geneID=comp144597_c0_seq1.path1;Name=comp144597_c0_seq1;Dir=indeterminatecoverage=98.6;identity=99.1;matches=430;mismatches=3;indels=1;unknowns=0;Target=comp144597_c0_seq1 439 7 .;CDS_Target=comp144597_c0_seq1 130 8 .;locus=RLOC_00002978
ChrX	stalkie_big_nohaplotig	exon	51118836	51119269	99	-	.	Parent=comp144597_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51119146	51119268	.	-	0	Parent=comp144597_c0_seq1.mrna1
ChrX	gffcl	locus	51119505	51120304	.	-	.	ID=RLOC_00002979;geneIDs=comp156042_c1_seq1.path1;transcripts=comp156042_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51119505	51120304	.	-	.	ID=comp156042_c1_seq1.mrna1;geneID=comp156042_c1_seq1.path1;Name=comp156042_c1_seq1;Dir=indeterminatecoverage=100.0;identity=89.7;matches=793;mismatches=7;indels=84;unknowns=0;Target=comp156042_c1_seq1 884 1 .;CDS_Target=comp156042_c1_seq1 195 121 .;locus=RLOC_00002979
ChrX	stalkie_big_nohaplotig	exon	51119505	51120304	89	-	.	Parent=comp156042_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51120123	51120184	.	-	0	Parent=comp156042_c1_seq1.mrna1
ChrX	gffcl	locus	51120481	51121075	.	-	.	ID=RLOC_00002980;geneIDs=comp116267_c0_seq1.path1;transcripts=comp116267_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51120481	51121075	.	-	.	ID=comp116267_c0_seq1.mrna1;geneID=comp116267_c0_seq1.path1;Name=comp116267_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=594;mismatches=1;indels=0;unknowns=0;Target=comp116267_c0_seq1 595 1 .;CDS_Target=comp116267_c0_seq1 58 2 .;locus=RLOC_00002980
ChrX	stalkie_big_nohaplotig	exon	51120481	51121075	99	-	.	Parent=comp116267_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51121018	51121074	.	-	0	Parent=comp116267_c0_seq1.mrna1
ChrX	gffcl	locus	51121561	51125128	.	-	.	ID=RLOC_00002981;geneIDs=FBgn0031760.1.path1;transcripts=FBgn0031760.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51121561	51125128	.	-	.	ID=FBgn0031760.1.mrna1;geneID=FBgn0031760.1.path1;Name=FBgn0031760.1;Dir=sensecoverage=100.0;identity=100.0;matches=957;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002981
ChrX	stalkie_big_nohaplotig	exon	51121561	51121626	100	-	.	Parent=FBgn0031760.1.mrna1;Target=FBgn0031760.1 892 957 +
ChrX	stalkie_big_nohaplotig	exon	51122777	51122893	100	-	.	Parent=FBgn0031760.1.mrna1;Target=FBgn0031760.1 775 891 +
ChrX	stalkie_big_nohaplotig	exon	51124051	51124161	100	-	.	Parent=FBgn0031760.1.mrna1;Target=FBgn0031760.1 664 774 +
ChrX	stalkie_big_nohaplotig	exon	51124271	51124549	100	-	.	Parent=FBgn0031760.1.mrna1;Target=FBgn0031760.1 385 663 +
ChrX	stalkie_big_nohaplotig	exon	51124608	51124688	100	-	.	Parent=FBgn0031760.1.mrna1;Target=FBgn0031760.1 304 384 +
ChrX	stalkie_big_nohaplotig	exon	51124757	51124951	100	-	.	Parent=FBgn0031760.1.mrna1;Target=FBgn0031760.1 109 303 +
ChrX	stalkie_big_nohaplotig	exon	51125021	51125128	100	-	.	Parent=FBgn0031760.1.mrna1;Target=FBgn0031760.1 1 108 +
ChrX	stalkie_big_nohaplotig	CDS	51121561	51121626	.	-	0	Parent=FBgn0031760.1.mrna1;Target=FBgn0031760.1 892 957 +
ChrX	stalkie_big_nohaplotig	CDS	51122777	51122893	.	-	0	Parent=FBgn0031760.1.mrna1;Target=FBgn0031760.1 775 891 +
ChrX	stalkie_big_nohaplotig	CDS	51124051	51124161	.	-	0	Parent=FBgn0031760.1.mrna1;Target=FBgn0031760.1 664 774 +
ChrX	stalkie_big_nohaplotig	CDS	51124271	51124549	.	-	0	Parent=FBgn0031760.1.mrna1;Target=FBgn0031760.1 385 663 +
ChrX	stalkie_big_nohaplotig	CDS	51124608	51124688	.	-	0	Parent=FBgn0031760.1.mrna1;Target=FBgn0031760.1 304 384 +
ChrX	stalkie_big_nohaplotig	CDS	51124757	51124951	.	-	0	Parent=FBgn0031760.1.mrna1;Target=FBgn0031760.1 109 303 +
ChrX	stalkie_big_nohaplotig	CDS	51125021	51125128	.	-	0	Parent=FBgn0031760.1.mrna1;Target=FBgn0031760.1 1 108 +
ChrX	gffcl	locus	51127129	51131312	.	+	.	ID=RLOC_00002982;geneIDs=FBgn0035024.1.path1;transcripts=FBgn0035024.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51127129	51131312	.	+	.	ID=FBgn0035024.1.mrna1;geneID=FBgn0035024.1.path1;Name=FBgn0035024.1;Dir=sensecoverage=100.0;identity=98.5;matches=1592;mismatches=7;indels=18;unknowns=0;locus=RLOC_00002982
ChrX	stalkie_big_nohaplotig	exon	51127129	51127207	97	+	.	Parent=FBgn0035024.1.mrna1;Target=FBgn0035024.1 1 79 +
ChrX	stalkie_big_nohaplotig	exon	51129775	51131312	98	+	.	Parent=FBgn0035024.1.mrna1;Target=FBgn0035024.1 80 1599 +
ChrX	stalkie_big_nohaplotig	CDS	51127129	51127207	.	+	0	Parent=FBgn0035024.1.mrna1;Target=FBgn0035024.1 1 79 +
ChrX	stalkie_big_nohaplotig	CDS	51129775	51131312	.	+	2	Parent=FBgn0035024.1.mrna1;Target=FBgn0035024.1 80 1599 +
ChrX	gffcl	locus	51134266	51140333	.	-	.	ID=RLOC_00002983;geneIDs=FBgn0032085.1.path1;transcripts=FBgn0032085.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51134266	51140333	.	-	.	ID=FBgn0032085.1.mrna1;geneID=FBgn0032085.1.path1;Name=FBgn0032085.1;Dir=sensecoverage=99.9;identity=100.0;matches=797;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002983
ChrX	stalkie_big_nohaplotig	exon	51134266	51134443	100	-	.	Parent=FBgn0032085.1.mrna1;Target=FBgn0032085.1 621 798 +
ChrX	stalkie_big_nohaplotig	exon	51134513	51134699	100	-	.	Parent=FBgn0032085.1.mrna1;Target=FBgn0032085.1 434 620 +
ChrX	stalkie_big_nohaplotig	exon	51139748	51139849	100	-	.	Parent=FBgn0032085.1.mrna1;Target=FBgn0032085.1 332 433 +
ChrX	stalkie_big_nohaplotig	exon	51139915	51140128	100	-	.	Parent=FBgn0032085.1.mrna1;Target=FBgn0032085.1 118 331 +
ChrX	stalkie_big_nohaplotig	exon	51140218	51140333	100	-	.	Parent=FBgn0032085.1.mrna1;Target=FBgn0032085.1 2 117 +
ChrX	stalkie_big_nohaplotig	CDS	51134266	51134443	.	-	1	Parent=FBgn0032085.1.mrna1;Target=FBgn0032085.1 621 798 +
ChrX	stalkie_big_nohaplotig	CDS	51134513	51134699	.	-	2	Parent=FBgn0032085.1.mrna1;Target=FBgn0032085.1 434 620 +
ChrX	stalkie_big_nohaplotig	CDS	51139748	51139849	.	-	2	Parent=FBgn0032085.1.mrna1;Target=FBgn0032085.1 332 433 +
ChrX	stalkie_big_nohaplotig	CDS	51139915	51140128	.	-	0	Parent=FBgn0032085.1.mrna1;Target=FBgn0032085.1 118 331 +
ChrX	stalkie_big_nohaplotig	CDS	51140218	51140331	.	-	0	Parent=FBgn0032085.1.mrna1;Target=FBgn0032085.1 4 117 +
ChrX	gffcl	locus	51154338	51166504	.	+	.	ID=RLOC_00002984;geneIDs=FBgn0011705.1.path1;transcripts=FBgn0011705.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51154338	51166504	.	+	.	ID=FBgn0011705.1.mrna1;geneID=FBgn0011705.1.path1;Name=FBgn0011705.1;Dir=sensecoverage=100.0;identity=99.9;matches=884;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002984
ChrX	stalkie_big_nohaplotig	exon	51154338	51154475	100	+	.	Parent=FBgn0011705.1.mrna1;Target=FBgn0011705.1 1 138 +
ChrX	stalkie_big_nohaplotig	exon	51163521	51163896	100	+	.	Parent=FBgn0011705.1.mrna1;Target=FBgn0011705.1 139 514 +
ChrX	stalkie_big_nohaplotig	exon	51164256	51164439	100	+	.	Parent=FBgn0011705.1.mrna1;Target=FBgn0011705.1 515 698 +
ChrX	stalkie_big_nohaplotig	exon	51166318	51166504	99	+	.	Parent=FBgn0011705.1.mrna1;Target=FBgn0011705.1 699 885 +
ChrX	stalkie_big_nohaplotig	CDS	51154338	51154475	.	+	0	Parent=FBgn0011705.1.mrna1;Target=FBgn0011705.1 1 138 +
ChrX	stalkie_big_nohaplotig	CDS	51163521	51163896	.	+	0	Parent=FBgn0011705.1.mrna1;Target=FBgn0011705.1 139 514 +
ChrX	stalkie_big_nohaplotig	CDS	51164256	51164439	.	+	2	Parent=FBgn0011705.1.mrna1;Target=FBgn0011705.1 515 698 +
ChrX	stalkie_big_nohaplotig	CDS	51166318	51166504	.	+	1	Parent=FBgn0011705.1.mrna1;Target=FBgn0011705.1 699 885 +
ChrX	gffcl	locus	51174375	51174954	.	+	.	ID=RLOC_00002985;geneIDs=comp142885_c0_seq1.path1;transcripts=comp142885_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51174375	51174954	.	+	.	ID=comp142885_c0_seq1.mrna1;geneID=comp142885_c0_seq1.path1;Name=comp142885_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=448;mismatches=1;indels=0;unknowns=0;Target=comp142885_c0_seq1 2 109 +;locus=RLOC_00002985
ChrX	stalkie_big_nohaplotig	exon	51174375	51174663	100	+	.	Parent=comp142885_c0_seq1.mrna1;Target=comp142885_c0_seq1 1 289 +
ChrX	stalkie_big_nohaplotig	exon	51174795	51174954	99	+	.	Parent=comp142885_c0_seq1.mrna1;Target=comp142885_c0_seq1 290 449 +
ChrX	stalkie_big_nohaplotig	CDS	51174376	51174483	.	+	0	Parent=comp142885_c0_seq1.mrna1
ChrX	gffcl	locus	51175036	51175121	.	+	.	ID=RLOC_00002986;geneIDs=FBgn0005638.1.path2;transcripts=FBgn0005638.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	51175036	51175121	.	+	.	ID=FBgn0005638.1.mrna2;geneID=FBgn0005638.1.path2;Name=FBgn0005638.1;Dir=indeterminatecoverage=8.5;identity=100.0;matches=86;mismatches=0;indels=0;unknowns=0;Target=FBgn0005638.1 1002 917 .;locus=RLOC_00002986
ChrX	stalkie_big_nohaplotig	exon	51175036	51175121	100	+	.	Parent=FBgn0005638.1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	51175036	51175121	.	+	1	Parent=FBgn0005638.1.mrna2
ChrX	gffcl	locus	51204620	51211620	.	+	.	ID=RLOC_00002987;geneIDs=FBgn0032084.1.path1;transcripts=FBgn0032084.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51204620	51211620	.	+	.	ID=FBgn0032084.1.mrna1;geneID=FBgn0032084.1.path1;Name=FBgn0032084.1;Dir=sensecoverage=100.0;identity=99.9;matches=989;mismatches=1;indels=0;unknowns=0;locus=RLOC_00002987
ChrX	stalkie_big_nohaplotig	exon	51204620	51204742	100	+	.	Parent=FBgn0032084.1.mrna1;Target=FBgn0032084.1 1 123 +
ChrX	stalkie_big_nohaplotig	exon	51209521	51209743	100	+	.	Parent=FBgn0032084.1.mrna1;Target=FBgn0032084.1 124 346 +
ChrX	stalkie_big_nohaplotig	exon	51209802	51209921	100	+	.	Parent=FBgn0032084.1.mrna1;Target=FBgn0032084.1 347 466 +
ChrX	stalkie_big_nohaplotig	exon	51211026	51211209	100	+	.	Parent=FBgn0032084.1.mrna1;Target=FBgn0032084.1 467 650 +
ChrX	stalkie_big_nohaplotig	exon	51211281	51211620	99	+	.	Parent=FBgn0032084.1.mrna1;Target=FBgn0032084.1 651 990 +
ChrX	stalkie_big_nohaplotig	CDS	51204620	51204742	.	+	0	Parent=FBgn0032084.1.mrna1;Target=FBgn0032084.1 1 123 +
ChrX	stalkie_big_nohaplotig	CDS	51209521	51209743	.	+	0	Parent=FBgn0032084.1.mrna1;Target=FBgn0032084.1 124 346 +
ChrX	stalkie_big_nohaplotig	CDS	51209802	51209921	.	+	2	Parent=FBgn0032084.1.mrna1;Target=FBgn0032084.1 347 466 +
ChrX	stalkie_big_nohaplotig	CDS	51211026	51211209	.	+	2	Parent=FBgn0032084.1.mrna1;Target=FBgn0032084.1 467 650 +
ChrX	stalkie_big_nohaplotig	CDS	51211281	51211620	.	+	1	Parent=FBgn0032084.1.mrna1;Target=FBgn0032084.1 651 990 +
ChrX	gffcl	locus	51228127	51229080	.	-	.	ID=RLOC_00002988;geneIDs=FBgn0031644.1.path1;transcripts=FBgn0031644.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51228127	51229080	.	-	.	ID=FBgn0031644.1.mrna1;geneID=FBgn0031644.1.path1;Name=FBgn0031644.1;Dir=sensecoverage=99.6;identity=99.8;matches=808;mismatches=1;indels=1;unknowns=0;locus=RLOC_00002988
ChrX	stalkie_big_nohaplotig	exon	51228127	51228584	99	-	.	Parent=FBgn0031644.1.mrna1;Target=FBgn0031644.1 355 813 +
ChrX	stalkie_big_nohaplotig	exon	51228730	51229080	100	-	.	Parent=FBgn0031644.1.mrna1;Target=FBgn0031644.1 4 354 +
ChrX	stalkie_big_nohaplotig	CDS	51228127	51228584	.	-	0	Parent=FBgn0031644.1.mrna1;Target=FBgn0031644.1 355 813 +
ChrX	stalkie_big_nohaplotig	CDS	51228730	51229080	.	-	0	Parent=FBgn0031644.1.mrna1;Target=FBgn0031644.1 4 354 +
ChrX	gffcl	locus	51261819	51262577	.	+	.	ID=RLOC_00002989;geneIDs=comp149522_c0_seq1.path1;transcripts=comp149522_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51261819	51262577	.	+	.	ID=comp149522_c0_seq1.mrna1;geneID=comp149522_c0_seq1.path1;Name=comp149522_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=739;mismatches=14;indels=6;unknowns=0;Target=comp149522_c0_seq1 753 1 .;CDS_Target=comp149522_c0_seq1 143 66 .;locus=RLOC_00002989
ChrX	stalkie_big_nohaplotig	exon	51261819	51262577	97	+	.	Parent=comp149522_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51261884	51261961	.	+	0	Parent=comp149522_c0_seq1.mrna1
ChrX	gffcl	locus	51282374	51282686	.	-	.	ID=RLOC_00002990;geneIDs=comp82100_c0_seq1.path1;transcripts=comp82100_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51282374	51282686	.	-	.	ID=comp82100_c0_seq1.mrna1;geneID=comp82100_c0_seq1.path1;Name=comp82100_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=313;mismatches=0;indels=0;unknowns=0;Target=comp82100_c0_seq1 313 1 .;CDS_Target=comp82100_c0_seq1 307 221 .;locus=RLOC_00002990
ChrX	stalkie_big_nohaplotig	exon	51282374	51282686	100	-	.	Parent=comp82100_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51282380	51282466	.	-	0	Parent=comp82100_c0_seq1.mrna1
ChrX	gffcl	locus	51352978	51355493	.	+	.	ID=RLOC_00002992;geneIDs=FBgn0032078.1.path1;transcripts=FBgn0032078.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51352978	51355493	.	+	.	ID=FBgn0032078.1.mrna1;geneID=FBgn0032078.1.path1;Name=FBgn0032078.1;Dir=sensecoverage=100.0;identity=100.0;matches=1140;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002992
ChrX	stalkie_big_nohaplotig	exon	51352978	51353032	100	+	.	Parent=FBgn0032078.1.mrna1;Target=FBgn0032078.1 1 55 +
ChrX	stalkie_big_nohaplotig	exon	51353092	51353602	100	+	.	Parent=FBgn0032078.1.mrna1;Target=FBgn0032078.1 56 566 +
ChrX	stalkie_big_nohaplotig	exon	51353659	51353755	100	+	.	Parent=FBgn0032078.1.mrna1;Target=FBgn0032078.1 567 663 +
ChrX	stalkie_big_nohaplotig	exon	51354947	51355231	100	+	.	Parent=FBgn0032078.1.mrna1;Target=FBgn0032078.1 664 948 +
ChrX	stalkie_big_nohaplotig	exon	51355302	51355493	100	+	.	Parent=FBgn0032078.1.mrna1;Target=FBgn0032078.1 949 1140 +
ChrX	stalkie_big_nohaplotig	CDS	51352978	51353032	.	+	0	Parent=FBgn0032078.1.mrna1;Target=FBgn0032078.1 1 55 +
ChrX	stalkie_big_nohaplotig	CDS	51353092	51353602	.	+	2	Parent=FBgn0032078.1.mrna1;Target=FBgn0032078.1 56 566 +
ChrX	stalkie_big_nohaplotig	CDS	51353659	51353755	.	+	1	Parent=FBgn0032078.1.mrna1;Target=FBgn0032078.1 567 663 +
ChrX	stalkie_big_nohaplotig	CDS	51354947	51355231	.	+	0	Parent=FBgn0032078.1.mrna1;Target=FBgn0032078.1 664 948 +
ChrX	stalkie_big_nohaplotig	CDS	51355302	51355493	.	+	0	Parent=FBgn0032078.1.mrna1;Target=FBgn0032078.1 949 1140 +
ChrX	gffcl	locus	51374785	51377027	.	-	.	ID=RLOC_00002993;geneIDs=comp152944_c0_seq1.path1;transcripts=comp152944_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51374785	51377027	.	-	.	ID=comp152944_c0_seq1.mrna1;geneID=comp152944_c0_seq1.path1;Name=comp152944_c0_seq1;Dir=sensecoverage=96.6;identity=99.3;matches=1056;mismatches=7;indels=0;unknowns=0;locus=RLOC_00002993
ChrX	stalkie_big_nohaplotig	exon	51374785	51375569	99	-	.	Parent=comp152944_c0_seq1.mrna1;Target=comp152944_c0_seq1 316 1100 +
ChrX	stalkie_big_nohaplotig	exon	51376750	51377027	98	-	.	Parent=comp152944_c0_seq1.mrna1;Target=comp152944_c0_seq1 38 315 +
ChrX	stalkie_big_nohaplotig	CDS	51375201	51375569	.	-	0	Parent=comp152944_c0_seq1.mrna1;Target=comp152944_c0_seq1 316 684 +
ChrX	stalkie_big_nohaplotig	CDS	51376750	51376881	.	-	0	Parent=comp152944_c0_seq1.mrna1;Target=comp152944_c0_seq1 184 315 +
ChrX	gffcl	locus	51382045	51383267	.	-	.	ID=RLOC_00002994;geneIDs=FBgn0032030.7.path3;transcripts=FBgn0032030.7.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	51382045	51383267	.	-	.	ID=FBgn0032030.7.mrna3;geneID=FBgn0032030.7.path3;Name=FBgn0032030.7;Dir=sensecoverage=100.0;identity=99.0;matches=1048;mismatches=11;indels=0;unknowns=0;locus=RLOC_00002994
ChrX	stalkie_big_nohaplotig	exon	51382045	51383008	99	-	.	Parent=FBgn0032030.7.mrna3;Target=FBgn0032030.7 96 1059 +
ChrX	stalkie_big_nohaplotig	exon	51383173	51383267	96	-	.	Parent=FBgn0032030.7.mrna3;Target=FBgn0032030.7 1 95 +
ChrX	stalkie_big_nohaplotig	CDS	51382045	51383008	.	-	1	Parent=FBgn0032030.7.mrna3;Target=FBgn0032030.7 96 1059 +
ChrX	stalkie_big_nohaplotig	CDS	51383173	51383267	.	-	0	Parent=FBgn0032030.7.mrna3;Target=FBgn0032030.7 1 95 +
ChrX	gffcl	locus	51444070	51450377	.	+	.	ID=RLOC_00002996;geneIDs=FBgn0031461.1.path1;transcripts=FBgn0031461.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51444070	51450377	.	+	.	ID=FBgn0031461.1.mrna1;geneID=FBgn0031461.1.path1;Name=FBgn0031461.1;Dir=sensecoverage=100.0;identity=100.0;matches=1983;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002996
ChrX	stalkie_big_nohaplotig	exon	51444070	51445255	100	+	.	Parent=FBgn0031461.1.mrna1;Target=FBgn0031461.1 1 1186 +
ChrX	stalkie_big_nohaplotig	exon	51447232	51447480	100	+	.	Parent=FBgn0031461.1.mrna1;Target=FBgn0031461.1 1187 1435 +
ChrX	stalkie_big_nohaplotig	exon	51449753	51450135	100	+	.	Parent=FBgn0031461.1.mrna1;Target=FBgn0031461.1 1436 1818 +
ChrX	stalkie_big_nohaplotig	exon	51450213	51450377	100	+	.	Parent=FBgn0031461.1.mrna1;Target=FBgn0031461.1 1819 1983 +
ChrX	stalkie_big_nohaplotig	CDS	51444070	51445255	.	+	0	Parent=FBgn0031461.1.mrna1;Target=FBgn0031461.1 1 1186 +
ChrX	stalkie_big_nohaplotig	CDS	51447232	51447480	.	+	2	Parent=FBgn0031461.1.mrna1;Target=FBgn0031461.1 1187 1435 +
ChrX	stalkie_big_nohaplotig	CDS	51449753	51450135	.	+	2	Parent=FBgn0031461.1.mrna1;Target=FBgn0031461.1 1436 1818 +
ChrX	stalkie_big_nohaplotig	CDS	51450213	51450377	.	+	0	Parent=FBgn0031461.1.mrna1;Target=FBgn0031461.1 1819 1983 +
ChrX	gffcl	locus	51460416	51462233	.	-	.	ID=RLOC_00002997;geneIDs=ORF439.path1;transcripts=ORF439.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51460416	51462233	.	-	.	ID=ORF439.mrna1;geneID=ORF439.path1;Name=ORF439;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1816;mismatches=2;indels=0;unknowns=0;Target=ORF439 1818 1 .;locus=RLOC_00002997
ChrX	stalkie_big_nohaplotig	exon	51460416	51462233	99	-	.	Parent=ORF439.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51460416	51462233	.	-	0	Parent=ORF439.mrna1
ChrX	gffcl	locus	51464132	51467406	.	-	.	ID=RLOC_00002998;geneIDs=FBgn0031463.1.path1,comp160984_c0_seq1.path1;transcripts=comp160984_c0_seq1.mrna1,FBgn0031463.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51464132	51467406	.	-	.	ID=comp160984_c0_seq1.mrna1;geneID=comp160984_c0_seq1.path1;Name=comp160984_c0_seq1;Dir=sensecoverage=99.9;identity=99.4;matches=2067;mismatches=11;indels=1;unknowns=0;locus=RLOC_00002998
ChrX	stalkie_big_nohaplotig	exon	51464132	51464831	99	-	.	Parent=comp160984_c0_seq1.mrna1;Target=comp160984_c0_seq1 1381 2081 +
ChrX	stalkie_big_nohaplotig	exon	51465903	51466573	99	-	.	Parent=comp160984_c0_seq1.mrna1;Target=comp160984_c0_seq1 710 1380 +
ChrX	stalkie_big_nohaplotig	exon	51466635	51466799	100	-	.	Parent=comp160984_c0_seq1.mrna1;Target=comp160984_c0_seq1 545 709 +
ChrX	stalkie_big_nohaplotig	exon	51466865	51467406	99	-	.	Parent=comp160984_c0_seq1.mrna1;Target=comp160984_c0_seq1 3 544 +
ChrX	stalkie_big_nohaplotig	CDS	51464785	51464831	.	-	2	Parent=comp160984_c0_seq1.mrna1;Target=comp160984_c0_seq1 1381 1427 +
ChrX	stalkie_big_nohaplotig	CDS	51465903	51466573	.	-	1	Parent=comp160984_c0_seq1.mrna1;Target=comp160984_c0_seq1 710 1380 +
ChrX	stalkie_big_nohaplotig	CDS	51466635	51466799	.	-	1	Parent=comp160984_c0_seq1.mrna1;Target=comp160984_c0_seq1 545 709 +
ChrX	stalkie_big_nohaplotig	CDS	51466865	51466950	.	-	0	Parent=comp160984_c0_seq1.mrna1;Target=comp160984_c0_seq1 459 544 +
ChrX	stalkie_big_nohaplotig	mRNA	51464648	51466953	.	-	.	ID=FBgn0031463.1.mrna1;geneID=FBgn0031463.1.path1;Name=FBgn0031463.1;Dir=sensecoverage=100.0;identity=99.8;matches=1039;mismatches=2;indels=0;unknowns=0;locus=RLOC_00002998
ChrX	stalkie_big_nohaplotig	exon	51464648	51464831	99	-	.	Parent=FBgn0031463.1.mrna1;Target=FBgn0031463.1 858 1041 +
ChrX	stalkie_big_nohaplotig	exon	51465903	51466021	99	-	.	Parent=FBgn0031463.1.mrna1;Target=FBgn0031463.1 739 857 +
ChrX	stalkie_big_nohaplotig	exon	51466090	51466573	100	-	.	Parent=FBgn0031463.1.mrna1;Target=FBgn0031463.1 255 738 +
ChrX	stalkie_big_nohaplotig	exon	51466635	51466799	100	-	.	Parent=FBgn0031463.1.mrna1;Target=FBgn0031463.1 90 254 +
ChrX	stalkie_big_nohaplotig	exon	51466865	51466953	100	-	.	Parent=FBgn0031463.1.mrna1;Target=FBgn0031463.1 1 89 +
ChrX	stalkie_big_nohaplotig	CDS	51464648	51464831	.	-	1	Parent=FBgn0031463.1.mrna1;Target=FBgn0031463.1 858 1041 +
ChrX	stalkie_big_nohaplotig	CDS	51465903	51466021	.	-	0	Parent=FBgn0031463.1.mrna1;Target=FBgn0031463.1 739 857 +
ChrX	stalkie_big_nohaplotig	CDS	51466090	51466573	.	-	1	Parent=FBgn0031463.1.mrna1;Target=FBgn0031463.1 255 738 +
ChrX	stalkie_big_nohaplotig	CDS	51466635	51466799	.	-	1	Parent=FBgn0031463.1.mrna1;Target=FBgn0031463.1 90 254 +
ChrX	stalkie_big_nohaplotig	CDS	51466865	51466953	.	-	0	Parent=FBgn0031463.1.mrna1;Target=FBgn0031463.1 1 89 +
ChrX	gffcl	locus	51470309	51477912	.	-	.	ID=RLOC_00002999;geneIDs=FBgn0031464.1.path1;transcripts=FBgn0031464.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51470309	51477912	.	-	.	ID=FBgn0031464.1.mrna1;geneID=FBgn0031464.1.path1;Name=FBgn0031464.1;Dir=sensecoverage=96.6;identity=100.0;matches=4430;mismatches=0;indels=0;unknowns=0;locus=RLOC_00002999
ChrX	stalkie_big_nohaplotig	exon	51470309	51470434	100	-	.	Parent=FBgn0031464.1.mrna1;Target=FBgn0031464.1 4462 4587 +
ChrX	stalkie_big_nohaplotig	exon	51470505	51470633	100	-	.	Parent=FBgn0031464.1.mrna1;Target=FBgn0031464.1 4333 4461 +
ChrX	stalkie_big_nohaplotig	exon	51470693	51471525	100	-	.	Parent=FBgn0031464.1.mrna1;Target=FBgn0031464.1 3500 4332 +
ChrX	stalkie_big_nohaplotig	exon	51472326	51472576	100	-	.	Parent=FBgn0031464.1.mrna1;Target=FBgn0031464.1 3249 3499 +
ChrX	stalkie_big_nohaplotig	exon	51473736	51473859	100	-	.	Parent=FBgn0031464.1.mrna1;Target=FBgn0031464.1 3125 3248 +
ChrX	stalkie_big_nohaplotig	exon	51473961	51475609	100	-	.	Parent=FBgn0031464.1.mrna1;Target=FBgn0031464.1 1476 3124 +
ChrX	stalkie_big_nohaplotig	exon	51475674	51475951	100	-	.	Parent=FBgn0031464.1.mrna1;Target=FBgn0031464.1 1198 1475 +
ChrX	stalkie_big_nohaplotig	exon	51476017	51476420	100	-	.	Parent=FBgn0031464.1.mrna1;Target=FBgn0031464.1 794 1197 +
ChrX	stalkie_big_nohaplotig	exon	51476478	51476682	100	-	.	Parent=FBgn0031464.1.mrna1;Target=FBgn0031464.1 589 793 +
ChrX	stalkie_big_nohaplotig	exon	51476740	51477089	100	-	.	Parent=FBgn0031464.1.mrna1;Target=FBgn0031464.1 239 588 +
ChrX	stalkie_big_nohaplotig	exon	51477832	51477912	100	-	.	Parent=FBgn0031464.1.mrna1;Target=FBgn0031464.1 158 238 +
ChrX	stalkie_big_nohaplotig	CDS	51470309	51470434	.	-	0	Parent=FBgn0031464.1.mrna1;Target=FBgn0031464.1 4462 4587 +
ChrX	stalkie_big_nohaplotig	CDS	51470505	51470633	.	-	0	Parent=FBgn0031464.1.mrna1;Target=FBgn0031464.1 4333 4461 +
ChrX	stalkie_big_nohaplotig	CDS	51470693	51471525	.	-	2	Parent=FBgn0031464.1.mrna1;Target=FBgn0031464.1 3500 4332 +
ChrX	stalkie_big_nohaplotig	CDS	51472326	51472576	.	-	1	Parent=FBgn0031464.1.mrna1;Target=FBgn0031464.1 3249 3499 +
ChrX	stalkie_big_nohaplotig	CDS	51473736	51473859	.	-	2	Parent=FBgn0031464.1.mrna1;Target=FBgn0031464.1 3125 3248 +
ChrX	stalkie_big_nohaplotig	CDS	51473961	51475609	.	-	1	Parent=FBgn0031464.1.mrna1;Target=FBgn0031464.1 1476 3124 +
ChrX	stalkie_big_nohaplotig	CDS	51475674	51475951	.	-	0	Parent=FBgn0031464.1.mrna1;Target=FBgn0031464.1 1198 1475 +
ChrX	stalkie_big_nohaplotig	CDS	51476017	51476420	.	-	2	Parent=FBgn0031464.1.mrna1;Target=FBgn0031464.1 794 1197 +
ChrX	stalkie_big_nohaplotig	CDS	51476478	51476682	.	-	0	Parent=FBgn0031464.1.mrna1;Target=FBgn0031464.1 589 793 +
ChrX	stalkie_big_nohaplotig	CDS	51476740	51477089	.	-	2	Parent=FBgn0031464.1.mrna1;Target=FBgn0031464.1 239 588 +
ChrX	stalkie_big_nohaplotig	CDS	51477832	51477910	.	-	0	Parent=FBgn0031464.1.mrna1;Target=FBgn0031464.1 160 238 +
ChrX	gffcl	locus	51566778	51587945	.	-	.	ID=RLOC_00003000;geneIDs=FBgn0031466.1.path1;transcripts=FBgn0031466.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51566778	51587945	.	-	.	ID=FBgn0031466.1.mrna1;geneID=FBgn0031466.1.path1;Name=FBgn0031466.1;Dir=sensecoverage=100.0;identity=99.7;matches=1174;mismatches=3;indels=0;unknowns=2;locus=RLOC_00003000
ChrX	stalkie_big_nohaplotig	exon	51566778	51567002	99	-	.	Parent=FBgn0031466.1.mrna1;Target=FBgn0031466.1 955 1179 +
ChrX	stalkie_big_nohaplotig	exon	51568175	51568474	99	-	.	Parent=FBgn0031466.1.mrna1;Target=FBgn0031466.1 655 954 +
ChrX	stalkie_big_nohaplotig	exon	51583913	51584006	100	-	.	Parent=FBgn0031466.1.mrna1;Target=FBgn0031466.1 561 654 +
ChrX	stalkie_big_nohaplotig	exon	51587386	51587945	100	-	.	Parent=FBgn0031466.1.mrna1;Target=FBgn0031466.1 1 560 +
ChrX	stalkie_big_nohaplotig	CDS	51566778	51567002	.	-	0	Parent=FBgn0031466.1.mrna1;Target=FBgn0031466.1 955 1179 +
ChrX	stalkie_big_nohaplotig	CDS	51568175	51568474	.	-	0	Parent=FBgn0031466.1.mrna1;Target=FBgn0031466.1 655 954 +
ChrX	stalkie_big_nohaplotig	CDS	51583913	51584006	.	-	1	Parent=FBgn0031466.1.mrna1;Target=FBgn0031466.1 561 654 +
ChrX	stalkie_big_nohaplotig	CDS	51587386	51587945	.	-	0	Parent=FBgn0031466.1.mrna1;Target=FBgn0031466.1 1 560 +
ChrX	gffcl	locus	51610356	51613003	.	+	.	ID=RLOC_00003001;geneIDs=FBgn0032078.2.path1;transcripts=FBgn0032078.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51610356	51613003	.	+	.	ID=FBgn0032078.2.mrna1;geneID=FBgn0032078.2.path1;Name=FBgn0032078.2;Dir=sensecoverage=100.0;identity=99.8;matches=1195;mismatches=1;indels=1;unknowns=0;locus=RLOC_00003001
ChrX	stalkie_big_nohaplotig	exon	51610356	51610983	99	+	.	Parent=FBgn0032078.2.mrna1;Target=FBgn0032078.2 1 629 +
ChrX	stalkie_big_nohaplotig	exon	51611044	51611140	100	+	.	Parent=FBgn0032078.2.mrna1;Target=FBgn0032078.2 630 726 +
ChrX	stalkie_big_nohaplotig	exon	51611207	51611485	100	+	.	Parent=FBgn0032078.2.mrna1;Target=FBgn0032078.2 727 1005 +
ChrX	stalkie_big_nohaplotig	exon	51612812	51613003	100	+	.	Parent=FBgn0032078.2.mrna1;Target=FBgn0032078.2 1006 1197 +
ChrX	stalkie_big_nohaplotig	CDS	51610424	51610983	.	+	0	Parent=FBgn0032078.2.mrna1;Target=FBgn0032078.2 70 629 +
ChrX	stalkie_big_nohaplotig	CDS	51611044	51611140	.	+	1	Parent=FBgn0032078.2.mrna1;Target=FBgn0032078.2 630 726 +
ChrX	stalkie_big_nohaplotig	CDS	51611207	51611485	.	+	0	Parent=FBgn0032078.2.mrna1;Target=FBgn0032078.2 727 1005 +
ChrX	stalkie_big_nohaplotig	CDS	51612812	51613003	.	+	0	Parent=FBgn0032078.2.mrna1;Target=FBgn0032078.2 1006 1197 +
ChrX	gffcl	locus	51613263	51614418	.	+	.	ID=RLOC_00003002;geneIDs=comp155279_c0_seq1.path1;transcripts=comp155279_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51613263	51614418	.	+	.	ID=comp155279_c0_seq1.mrna1;geneID=comp155279_c0_seq1.path1;Name=comp155279_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=1150;mismatches=6;indels=11;unknowns=0;Target=comp155279_c0_seq1 1167 1 .;CDS_Target=comp155279_c0_seq1 677 585 .;locus=RLOC_00003002
ChrX	stalkie_big_nohaplotig	exon	51613263	51614418	98	+	.	Parent=comp155279_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51613836	51613928	.	+	0	Parent=comp155279_c0_seq1.mrna1
ChrX	gffcl	locus	51614501	51615138	.	+	.	ID=RLOC_00003003;geneIDs=FBgn0028858.2.path1;transcripts=FBgn0028858.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51614501	51615138	.	+	.	ID=FBgn0028858.2.mrna1;geneID=FBgn0028858.2.path1;Name=FBgn0028858.2;Dir=sensecoverage=100.0;identity=100.0;matches=570;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003003
ChrX	stalkie_big_nohaplotig	exon	51614501	51614767	100	+	.	Parent=FBgn0028858.2.mrna1;Target=FBgn0028858.2 1 267 +
ChrX	stalkie_big_nohaplotig	exon	51614836	51615138	100	+	.	Parent=FBgn0028858.2.mrna1;Target=FBgn0028858.2 268 570 +
ChrX	stalkie_big_nohaplotig	CDS	51614501	51614767	.	+	0	Parent=FBgn0028858.2.mrna1;Target=FBgn0028858.2 1 267 +
ChrX	stalkie_big_nohaplotig	CDS	51614836	51615138	.	+	0	Parent=FBgn0028858.2.mrna1;Target=FBgn0028858.2 268 570 +
ChrX	gffcl	locus	51617521	51618177	.	+	.	ID=RLOC_00003004;geneIDs=FBgn0028858.3.path1;transcripts=FBgn0028858.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51617521	51618177	.	+	.	ID=FBgn0028858.3.mrna1;geneID=FBgn0028858.3.path1;Name=FBgn0028858.3;Dir=sensecoverage=100.0;identity=100.0;matches=549;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003004
ChrX	stalkie_big_nohaplotig	exon	51617521	51617790	100	+	.	Parent=FBgn0028858.3.mrna1;Target=FBgn0028858.3 1 270 +
ChrX	stalkie_big_nohaplotig	exon	51617899	51618177	100	+	.	Parent=FBgn0028858.3.mrna1;Target=FBgn0028858.3 271 549 +
ChrX	stalkie_big_nohaplotig	CDS	51617521	51617790	.	+	0	Parent=FBgn0028858.3.mrna1;Target=FBgn0028858.3 1 270 +
ChrX	stalkie_big_nohaplotig	CDS	51617899	51618177	.	+	0	Parent=FBgn0028858.3.mrna1;Target=FBgn0028858.3 271 549 +
ChrX	gffcl	locus	51622048	51623459	.	-	.	ID=RLOC_00003005;geneIDs=comp162845_c1_seq1.path1;transcripts=comp162845_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51622048	51623459	.	-	.	ID=comp162845_c1_seq1.mrna1;geneID=comp162845_c1_seq1.path1;Name=comp162845_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=1394;mismatches=18;indels=4;unknowns=0;Target=comp162845_c1_seq1 1416 1 .;CDS_Target=comp162845_c1_seq1 719 573 .;locus=RLOC_00003005
ChrX	stalkie_big_nohaplotig	exon	51622048	51623459	98	-	.	Parent=comp162845_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51622745	51622891	.	-	0	Parent=comp162845_c1_seq1.mrna1
ChrX	gffcl	locus	51625882	51626500	.	-	.	ID=RLOC_00003006;geneIDs=comp159684_c0_seq1.path1;transcripts=comp159684_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51625882	51626500	.	-	.	ID=comp159684_c0_seq1.mrna1;geneID=comp159684_c0_seq1.path1;Name=comp159684_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=619;mismatches=0;indels=0;unknowns=0;Target=comp159684_c0_seq1 619 1 .;CDS_Target=comp159684_c0_seq1 459 271 .;locus=RLOC_00003006
ChrX	stalkie_big_nohaplotig	exon	51625882	51626500	100	-	.	Parent=comp159684_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51626042	51626230	.	-	0	Parent=comp159684_c0_seq1.mrna1
ChrX	gffcl	locus	51626510	51627268	.	-	.	ID=RLOC_00003007;geneIDs=comp155061_c0_seq1.path1;transcripts=comp155061_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51626510	51627268	.	-	.	ID=comp155061_c0_seq1.mrna1;geneID=comp155061_c0_seq1.path1;Name=comp155061_c0_seq1;Dir=indeterminatecoverage=99.1;identity=97.0;matches=737;mismatches=11;indels=12;unknowns=0;Target=comp155061_c0_seq1 756 8 .;CDS_Target=comp155061_c0_seq1 116 9 .;locus=RLOC_00003007
ChrX	stalkie_big_nohaplotig	exon	51626510	51627268	96	-	.	Parent=comp155061_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51627160	51627267	.	-	0	Parent=comp155061_c0_seq1.mrna1
ChrX	gffcl	locus	51737803	51739637	.	+	.	ID=RLOC_00003010;geneIDs=comp158438_c0_seq1.path1;transcripts=comp158438_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51737803	51739637	.	+	.	ID=comp158438_c0_seq1.mrna1;geneID=comp158438_c0_seq1.path1;Name=comp158438_c0_seq1;Dir=antisensecoverage=97.8;identity=99.5;matches=1543;mismatches=6;indels=1;unknowns=0;locus=RLOC_00003010
ChrX	stalkie_big_nohaplotig	exon	51737803	51738025	99	+	.	Parent=comp158438_c0_seq1.mrna1;Target=comp158438_c0_seq1 1362 1584 -
ChrX	stalkie_big_nohaplotig	exon	51738083	51738192	100	+	.	Parent=comp158438_c0_seq1.mrna1;Target=comp158438_c0_seq1 1252 1361 -
ChrX	stalkie_big_nohaplotig	exon	51738259	51738510	100	+	.	Parent=comp158438_c0_seq1.mrna1;Target=comp158438_c0_seq1 1000 1251 -
ChrX	stalkie_big_nohaplotig	exon	51738674	51739637	99	+	.	Parent=comp158438_c0_seq1.mrna1;Target=comp158438_c0_seq1 35 999 -
ChrX	stalkie_big_nohaplotig	CDS	51737956	51738025	.	+	0	Parent=comp158438_c0_seq1.mrna1;Target=comp158438_c0_seq1 1362 1431 .
ChrX	stalkie_big_nohaplotig	CDS	51738083	51738192	.	+	2	Parent=comp158438_c0_seq1.mrna1;Target=comp158438_c0_seq1 1252 1361 .
ChrX	stalkie_big_nohaplotig	CDS	51738259	51738510	.	+	0	Parent=comp158438_c0_seq1.mrna1;Target=comp158438_c0_seq1 1000 1251 .
ChrX	stalkie_big_nohaplotig	CDS	51738674	51738703	.	+	0	Parent=comp158438_c0_seq1.mrna1;Target=comp158438_c0_seq1 970 999 .
ChrX	gffcl	locus	51755897	51756464	.	+	.	ID=RLOC_00003011;geneIDs=comp66934_c0_seq1.path1;transcripts=comp66934_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51755897	51756464	.	+	.	ID=comp66934_c0_seq1.mrna1;geneID=comp66934_c0_seq1.path1;Name=comp66934_c0_seq1;Dir=indeterminatecoverage=96.6;identity=98.6;matches=560;mismatches=2;indels=6;unknowns=0;Target=comp66934_c0_seq1 564 3 .;CDS_Target=comp66934_c0_seq1 278 138 .;locus=RLOC_00003011
ChrX	stalkie_big_nohaplotig	exon	51755897	51756464	98	+	.	Parent=comp66934_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51756032	51756178	.	+	0	Parent=comp66934_c0_seq1.mrna1
ChrX	gffcl	locus	51764481	51766007	.	+	.	ID=RLOC_00003012;geneIDs=comp150457_c0_seq1.path1;transcripts=comp150457_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51764481	51766007	.	+	.	ID=comp150457_c0_seq1.mrna1;geneID=comp150457_c0_seq1.path1;Name=comp150457_c0_seq1;Dir=antisensecoverage=98.3;identity=99.9;matches=818;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003012
ChrX	stalkie_big_nohaplotig	exon	51764481	51764668	100	+	.	Parent=comp150457_c0_seq1.mrna1;Target=comp150457_c0_seq1 646 833 -
ChrX	stalkie_big_nohaplotig	exon	51765261	51765400	100	+	.	Parent=comp150457_c0_seq1.mrna1;Target=comp150457_c0_seq1 506 645 -
ChrX	stalkie_big_nohaplotig	exon	51765517	51766007	99	+	.	Parent=comp150457_c0_seq1.mrna1;Target=comp150457_c0_seq1 15 505 -
ChrX	stalkie_big_nohaplotig	CDS	51764596	51764668	.	+	0	Parent=comp150457_c0_seq1.mrna1;Target=comp150457_c0_seq1 646 718 .
ChrX	stalkie_big_nohaplotig	CDS	51765261	51765400	.	+	2	Parent=comp150457_c0_seq1.mrna1;Target=comp150457_c0_seq1 506 645 .
ChrX	stalkie_big_nohaplotig	CDS	51765517	51765729	.	+	0	Parent=comp150457_c0_seq1.mrna1;Target=comp150457_c0_seq1 293 505 .
ChrX	gffcl	locus	51796641	51818609	.	-	.	ID=RLOC_00003013;geneIDs=FBgn0010382.1.path1;transcripts=FBgn0010382.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51796641	51818609	.	-	.	ID=FBgn0010382.1.mrna1;geneID=FBgn0010382.1.path1;Name=FBgn0010382.1;Dir=sensecoverage=98.3;identity=100.0;matches=2257;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003013
ChrX	stalkie_big_nohaplotig	exon	51796641	51797069	100	-	.	Parent=FBgn0010382.1.mrna1;Target=FBgn0010382.1 1867 2295 +
ChrX	stalkie_big_nohaplotig	exon	51797604	51797829	100	-	.	Parent=FBgn0010382.1.mrna1;Target=FBgn0010382.1 1641 1866 +
ChrX	stalkie_big_nohaplotig	exon	51797908	51799172	100	-	.	Parent=FBgn0010382.1.mrna1;Target=FBgn0010382.1 376 1640 +
ChrX	stalkie_big_nohaplotig	exon	51818273	51818609	100	-	.	Parent=FBgn0010382.1.mrna1;Target=FBgn0010382.1 39 375 +
ChrX	stalkie_big_nohaplotig	CDS	51796641	51797069	.	-	0	Parent=FBgn0010382.1.mrna1;Target=FBgn0010382.1 1867 2295 +
ChrX	stalkie_big_nohaplotig	CDS	51797604	51797829	.	-	1	Parent=FBgn0010382.1.mrna1;Target=FBgn0010382.1 1641 1866 +
ChrX	stalkie_big_nohaplotig	CDS	51797908	51799172	.	-	0	Parent=FBgn0010382.1.mrna1;Target=FBgn0010382.1 376 1640 +
ChrX	stalkie_big_nohaplotig	CDS	51818273	51818608	.	-	0	Parent=FBgn0010382.1.mrna1;Target=FBgn0010382.1 40 375 +
ChrX	gffcl	locus	51844867	51845243	.	+	.	ID=RLOC_00003014;geneIDs=comp1605470_c0_seq1.path1;transcripts=comp1605470_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51844867	51845243	.	+	.	ID=comp1605470_c0_seq1.mrna1;geneID=comp1605470_c0_seq1.path1;Name=comp1605470_c0_seq1;Dir=indeterminatecoverage=94.5;identity=100.0;matches=377;mismatches=0;indels=0;unknowns=0;Target=comp1605470_c0_seq1 399 23 .;CDS_Target=comp1605470_c0_seq1 160 23 .;locus=RLOC_00003014
ChrX	stalkie_big_nohaplotig	exon	51844867	51845243	100	+	.	Parent=comp1605470_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51844867	51845004	.	+	0	Parent=comp1605470_c0_seq1.mrna1
ChrX	gffcl	locus	51854232	51855676	.	-	.	ID=RLOC_00003015;geneIDs=comp162424_c0_seq1.path1;transcripts=comp162424_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51854232	51855676	.	-	.	ID=comp162424_c0_seq1.mrna1;geneID=comp162424_c0_seq1.path1;Name=comp162424_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1440;mismatches=5;indels=6;unknowns=0;Target=comp162424_c0_seq1 1451 1 .;CDS_Target=comp162424_c0_seq1 752 672 .;locus=RLOC_00003015
ChrX	stalkie_big_nohaplotig	exon	51854232	51855676	99	-	.	Parent=comp162424_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51854931	51855011	.	-	0	Parent=comp162424_c0_seq1.mrna1
ChrX	gffcl	locus	51857346	51857728	.	+	.	ID=RLOC_00003016;geneIDs=comp150256_c0_seq1.path1;transcripts=comp150256_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51857346	51857728	.	+	.	ID=comp150256_c0_seq1.mrna1;geneID=comp150256_c0_seq1.path1;Name=comp150256_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=383;mismatches=0;indels=0;unknowns=0;Target=comp150256_c0_seq1 383 1 .;CDS_Target=comp150256_c0_seq1 87 1 .;locus=RLOC_00003016
ChrX	stalkie_big_nohaplotig	exon	51857346	51857728	100	+	.	Parent=comp150256_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51857346	51857432	.	+	0	Parent=comp150256_c0_seq1.mrna1
ChrX	gffcl	locus	51864004	51865448	.	-	.	ID=RLOC_00003017;geneIDs=comp162424_c0_seq1.path2;transcripts=comp162424_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	51864004	51865448	.	-	.	ID=comp162424_c0_seq1.mrna2;geneID=comp162424_c0_seq1.path2;Name=comp162424_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1440;mismatches=5;indels=6;unknowns=0;Target=comp162424_c0_seq1 1451 1 .;CDS_Target=comp162424_c0_seq1 752 672 .;locus=RLOC_00003017
ChrX	stalkie_big_nohaplotig	exon	51864004	51865448	99	-	.	Parent=comp162424_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	51864703	51864783	.	-	0	Parent=comp162424_c0_seq1.mrna2
ChrX	gffcl	locus	51867052	51867434	.	+	.	ID=RLOC_00003018;geneIDs=comp150256_c0_seq1.path2;transcripts=comp150256_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	51867052	51867434	.	+	.	ID=comp150256_c0_seq1.mrna2;geneID=comp150256_c0_seq1.path2;Name=comp150256_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=383;mismatches=0;indels=0;unknowns=0;Target=comp150256_c0_seq1 383 1 .;CDS_Target=comp150256_c0_seq1 87 1 .;locus=RLOC_00003018
ChrX	stalkie_big_nohaplotig	exon	51867052	51867434	100	+	.	Parent=comp150256_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	51867052	51867138	.	+	0	Parent=comp150256_c0_seq1.mrna2
ChrX	gffcl	locus	51868089	51869097	.	-	.	ID=RLOC_00003019;geneIDs=comp156738_c0_seq1.path1;transcripts=comp156738_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51868089	51869097	.	-	.	ID=comp156738_c0_seq1.mrna1;geneID=comp156738_c0_seq1.path1;Name=comp156738_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1008;mismatches=1;indels=0;unknowns=0;Target=comp156738_c0_seq1 1009 1 .;CDS_Target=comp156738_c0_seq1 367 152 .;locus=RLOC_00003019
ChrX	stalkie_big_nohaplotig	exon	51868089	51869097	99	-	.	Parent=comp156738_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51868731	51868946	.	-	0	Parent=comp156738_c0_seq1.mrna1
ChrX	gffcl	locus	51878105	51881595	.	-	.	ID=RLOC_00003020;geneIDs=FBgn0001989.1.path1;transcripts=FBgn0001989.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51878105	51881595	.	-	.	ID=FBgn0001989.1.mrna1;geneID=FBgn0001989.1.path1;Name=FBgn0001989.1;Dir=sensecoverage=100.0;identity=100.0;matches=507;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003020
ChrX	stalkie_big_nohaplotig	exon	51878105	51878242	100	-	.	Parent=FBgn0001989.1.mrna1;Target=FBgn0001989.1 370 507 +
ChrX	stalkie_big_nohaplotig	exon	51881043	51881144	100	-	.	Parent=FBgn0001989.1.mrna1;Target=FBgn0001989.1 268 369 +
ChrX	stalkie_big_nohaplotig	exon	51881329	51881595	100	-	.	Parent=FBgn0001989.1.mrna1;Target=FBgn0001989.1 1 267 +
ChrX	stalkie_big_nohaplotig	CDS	51878105	51878242	.	-	0	Parent=FBgn0001989.1.mrna1;Target=FBgn0001989.1 370 507 +
ChrX	stalkie_big_nohaplotig	CDS	51881043	51881144	.	-	0	Parent=FBgn0001989.1.mrna1;Target=FBgn0001989.1 268 369 +
ChrX	stalkie_big_nohaplotig	CDS	51881329	51881595	.	-	0	Parent=FBgn0001989.1.mrna1;Target=FBgn0001989.1 1 267 +
ChrX	gffcl	locus	51882013	51891258	.	+	.	ID=RLOC_00003021;geneIDs=FBgn0001986.1.path1;transcripts=FBgn0001986.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51882013	51891258	.	+	.	ID=FBgn0001986.1.mrna1;geneID=FBgn0001986.1.path1;Name=FBgn0001986.1;Dir=sensecoverage=100.0;identity=99.9;matches=3471;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003021
ChrX	stalkie_big_nohaplotig	exon	51882013	51882038	100	+	.	Parent=FBgn0001986.1.mrna1;Target=FBgn0001986.1 1 26 +
ChrX	stalkie_big_nohaplotig	exon	51884147	51884200	100	+	.	Parent=FBgn0001986.1.mrna1;Target=FBgn0001986.1 27 80 +
ChrX	stalkie_big_nohaplotig	exon	51884310	51884363	98	+	.	Parent=FBgn0001986.1.mrna1;Target=FBgn0001986.1 81 134 +
ChrX	stalkie_big_nohaplotig	exon	51884417	51884470	100	+	.	Parent=FBgn0001986.1.mrna1;Target=FBgn0001986.1 135 188 +
ChrX	stalkie_big_nohaplotig	exon	51886335	51886400	100	+	.	Parent=FBgn0001986.1.mrna1;Target=FBgn0001986.1 189 254 +
ChrX	stalkie_big_nohaplotig	exon	51886675	51886824	100	+	.	Parent=FBgn0001986.1.mrna1;Target=FBgn0001986.1 255 404 +
ChrX	stalkie_big_nohaplotig	exon	51887987	51888990	99	+	.	Parent=FBgn0001986.1.mrna1;Target=FBgn0001986.1 405 1408 +
ChrX	stalkie_big_nohaplotig	exon	51889045	51889525	100	+	.	Parent=FBgn0001986.1.mrna1;Target=FBgn0001986.1 1409 1889 +
ChrX	stalkie_big_nohaplotig	exon	51889674	51891258	100	+	.	Parent=FBgn0001986.1.mrna1;Target=FBgn0001986.1 1890 3474 +
ChrX	stalkie_big_nohaplotig	CDS	51882013	51882038	.	+	0	Parent=FBgn0001986.1.mrna1;Target=FBgn0001986.1 1 26 +
ChrX	stalkie_big_nohaplotig	CDS	51884147	51884200	.	+	1	Parent=FBgn0001986.1.mrna1;Target=FBgn0001986.1 27 80 +
ChrX	stalkie_big_nohaplotig	CDS	51884310	51884363	.	+	1	Parent=FBgn0001986.1.mrna1;Target=FBgn0001986.1 81 134 +
ChrX	stalkie_big_nohaplotig	CDS	51884417	51884470	.	+	1	Parent=FBgn0001986.1.mrna1;Target=FBgn0001986.1 135 188 +
ChrX	stalkie_big_nohaplotig	CDS	51886335	51886400	.	+	1	Parent=FBgn0001986.1.mrna1;Target=FBgn0001986.1 189 254 +
ChrX	stalkie_big_nohaplotig	CDS	51886675	51886824	.	+	1	Parent=FBgn0001986.1.mrna1;Target=FBgn0001986.1 255 404 +
ChrX	stalkie_big_nohaplotig	CDS	51887987	51888990	.	+	1	Parent=FBgn0001986.1.mrna1;Target=FBgn0001986.1 405 1408 +
ChrX	stalkie_big_nohaplotig	CDS	51889045	51889525	.	+	2	Parent=FBgn0001986.1.mrna1;Target=FBgn0001986.1 1409 1889 +
ChrX	stalkie_big_nohaplotig	CDS	51889674	51891258	.	+	1	Parent=FBgn0001986.1.mrna1;Target=FBgn0001986.1 1890 3474 +
ChrX	gffcl	locus	51896504	51897304	.	-	.	ID=RLOC_00003022;geneIDs=FBgn0015316.1.path1;transcripts=FBgn0015316.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51896504	51897304	.	-	.	ID=FBgn0015316.1.mrna1;geneID=FBgn0015316.1.path1;Name=FBgn0015316.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=799;mismatches=2;indels=0;unknowns=0;Target=FBgn0015316.1 801 1 .;locus=RLOC_00003022
ChrX	stalkie_big_nohaplotig	exon	51896504	51897304	99	-	.	Parent=FBgn0015316.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51896504	51897304	.	-	0	Parent=FBgn0015316.1.mrna1
ChrX	gffcl	locus	51897634	51898446	.	-	.	ID=RLOC_00003023;geneIDs=FBgn0040964.1.path1;transcripts=FBgn0040964.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51897634	51898446	.	-	.	ID=FBgn0040964.1.mrna1;geneID=FBgn0040964.1.path1;Name=FBgn0040964.1;Dir=sensecoverage=100.0;identity=99.4;matches=638;mismatches=4;indels=0;unknowns=0;locus=RLOC_00003023
ChrX	stalkie_big_nohaplotig	exon	51897634	51898255	99	-	.	Parent=FBgn0040964.1.mrna1;Target=FBgn0040964.1 21 642 +
ChrX	stalkie_big_nohaplotig	exon	51898427	51898446	100	-	.	Parent=FBgn0040964.1.mrna1;Target=FBgn0040964.1 1 20 +
ChrX	stalkie_big_nohaplotig	CDS	51897634	51898255	.	-	1	Parent=FBgn0040964.1.mrna1;Target=FBgn0040964.1 21 642 +
ChrX	stalkie_big_nohaplotig	CDS	51898427	51898446	.	-	0	Parent=FBgn0040964.1.mrna1;Target=FBgn0040964.1 1 20 +
ChrX	gffcl	locus	51903301	51903999	.	-	.	ID=RLOC_00003024;geneIDs=comp155265_c0_seq1.path1;transcripts=comp155265_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51903301	51903999	.	-	.	ID=comp155265_c0_seq1.mrna1;geneID=comp155265_c0_seq1.path1;Name=comp155265_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.7;matches=697;mismatches=2;indels=0;unknowns=0;Target=comp155265_c0_seq1 699 1 .;CDS_Target=comp155265_c0_seq1 492 367 .;locus=RLOC_00003024
ChrX	stalkie_big_nohaplotig	exon	51903301	51903999	99	-	.	Parent=comp155265_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51903508	51903633	.	-	0	Parent=comp155265_c0_seq1.mrna1
ChrX	gffcl	locus	51954436	51960510	.	+	.	ID=RLOC_00003026;geneIDs=FBgn0028507.1.path1;transcripts=FBgn0028507.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51954436	51960510	.	+	.	ID=FBgn0028507.1.mrna1;geneID=FBgn0028507.1.path1;Name=FBgn0028507.1;Dir=sensecoverage=100.0;identity=100.0;matches=1005;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003026
ChrX	stalkie_big_nohaplotig	exon	51954436	51954675	100	+	.	Parent=FBgn0028507.1.mrna1;Target=FBgn0028507.1 1 240 +
ChrX	stalkie_big_nohaplotig	exon	51957525	51957950	100	+	.	Parent=FBgn0028507.1.mrna1;Target=FBgn0028507.1 241 666 +
ChrX	stalkie_big_nohaplotig	exon	51960095	51960399	100	+	.	Parent=FBgn0028507.1.mrna1;Target=FBgn0028507.1 667 971 +
ChrX	stalkie_big_nohaplotig	exon	51960477	51960510	100	+	.	Parent=FBgn0028507.1.mrna1;Target=FBgn0028507.1 972 1005 +
ChrX	stalkie_big_nohaplotig	CDS	51954436	51954675	.	+	0	Parent=FBgn0028507.1.mrna1;Target=FBgn0028507.1 1 240 +
ChrX	stalkie_big_nohaplotig	CDS	51957525	51957950	.	+	0	Parent=FBgn0028507.1.mrna1;Target=FBgn0028507.1 241 666 +
ChrX	stalkie_big_nohaplotig	CDS	51960095	51960399	.	+	0	Parent=FBgn0028507.1.mrna1;Target=FBgn0028507.1 667 971 +
ChrX	stalkie_big_nohaplotig	CDS	51960477	51960510	.	+	1	Parent=FBgn0028507.1.mrna1;Target=FBgn0028507.1 972 1005 +
ChrX	gffcl	locus	51961068	51964214	.	-	.	ID=RLOC_00003027;geneIDs=comp163276_c0_seq1.path1;transcripts=comp163276_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51961068	51964214	.	-	.	ID=comp163276_c0_seq1.mrna1;geneID=comp163276_c0_seq1.path1;Name=comp163276_c0_seq1;Dir=indeterminatecoverage=99.6;identity=97.8;matches=3081;mismatches=24;indels=46;unknowns=0;Target=comp163276_c0_seq1 3109 1 .;CDS_Target=comp163276_c0_seq1 1223 852 .;locus=RLOC_00003027
ChrX	stalkie_big_nohaplotig	exon	51961068	51964214	97	-	.	Parent=comp163276_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51962955	51963326	.	-	0	Parent=comp163276_c0_seq1.mrna1
ChrX	gffcl	locus	51966740	51967351	.	+	.	ID=RLOC_00003028;geneIDs=comp160520_c0_seq1.path1;transcripts=comp160520_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51966740	51967351	.	+	.	ID=comp160520_c0_seq1.mrna1;geneID=comp160520_c0_seq1.path1;Name=comp160520_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.7;matches=597;mismatches=14;indels=40;unknowns=0;Target=comp160520_c0_seq1 650 1 .;CDS_Target=comp160520_c0_seq1 46 2 .;locus=RLOC_00003028
ChrX	stalkie_big_nohaplotig	exon	51966740	51967351	91	+	.	Parent=comp160520_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51966741	51966785	.	+	0	Parent=comp160520_c0_seq1.mrna1
ChrX	gffcl	locus	51968074	51969448	.	-	.	ID=RLOC_00003029;geneIDs=comp143492_c0_seq1.path1,comp159124_c0_seq1.path1;transcripts=comp159124_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51968074	51969218	.	-	.	ID=comp159124_c0_seq1.mrna1;geneID=comp159124_c0_seq1.path1;Name=comp159124_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=1132;mismatches=13;indels=8;unknowns=0;Target=comp159124_c0_seq1 1153 1 .;CDS_Target=comp159124_c0_seq1 342 217 .;locus=RLOC_00003029
ChrX	stalkie_big_nohaplotig	exon	51968074	51969218	98	-	.	Parent=comp159124_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51968877	51969002	.	-	0	Parent=comp159124_c0_seq1.mrna1
ChrX	gffcl	locus	51977169	51978095	.	+	.	ID=RLOC_00003030;geneIDs=comp160368_c0_seq1.path1;transcripts=comp160368_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51977169	51978095	.	+	.	ID=comp160368_c0_seq1.mrna1;geneID=comp160368_c0_seq1.path1;Name=comp160368_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.3;matches=920;mismatches=7;indels=9;unknowns=0;Target=comp160368_c0_seq1 937 2 .;CDS_Target=comp160368_c0_seq1 118 2 .;locus=RLOC_00003030
ChrX	stalkie_big_nohaplotig	exon	51977169	51978095	98	+	.	Parent=comp160368_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51977169	51977285	.	+	0	Parent=comp160368_c0_seq1.mrna1
ChrX	gffcl	locus	51978796	51979663	.	+	.	ID=RLOC_00003031;geneIDs=comp148114_c0_seq1.path1;transcripts=comp148114_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	51978796	51979663	.	+	.	ID=comp148114_c0_seq1.mrna1;geneID=comp148114_c0_seq1.path1;Name=comp148114_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.1;matches=860;mismatches=7;indels=1;unknowns=0;Target=comp148114_c0_seq1 867 1 .;CDS_Target=comp148114_c0_seq1 621 580 .;locus=RLOC_00003031
ChrX	stalkie_big_nohaplotig	exon	51978796	51979663	99	+	.	Parent=comp148114_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	51979375	51979416	.	+	0	Parent=comp148114_c0_seq1.mrna1
ChrX	gffcl	locus	52066320	52114607	.	+	.	ID=RLOC_00003033;geneIDs=comp151677_c0_seq1.path1;transcripts=comp151677_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52066320	52114607	.	+	.	ID=comp151677_c0_seq1.mrna1;geneID=comp151677_c0_seq1.path1;Name=comp151677_c0_seq1;Dir=indeterminatecoverage=83.6;identity=94.3;matches=857;mismatches=12;indels=40;unknowns=0;Target=comp151677_c0_seq1 845 714 .;locus=RLOC_00003033
ChrX	stalkie_big_nohaplotig	exon	52066320	52066325	100	+	.	Parent=comp151677_c0_seq1.mrna1;Target=comp151677_c0_seq1 183 178 .
ChrX	stalkie_big_nohaplotig	exon	52066773	52066823	58	+	.	Parent=comp151677_c0_seq1.mrna1;Target=comp151677_c0_seq1 230 184 .
ChrX	stalkie_big_nohaplotig	exon	52067811	52067812	100	+	.	Parent=comp151677_c0_seq1.mrna1;Target=comp151677_c0_seq1 232 231 .
ChrX	stalkie_big_nohaplotig	exon	52073690	52073693	100	+	.	Parent=comp151677_c0_seq1.mrna1;Target=comp151677_c0_seq1 236 233 .
ChrX	stalkie_big_nohaplotig	exon	52078328	52078333	100	+	.	Parent=comp151677_c0_seq1.mrna1;Target=comp151677_c0_seq1 242 237 .
ChrX	stalkie_big_nohaplotig	exon	52083211	52083218	100	+	.	Parent=comp151677_c0_seq1.mrna1;Target=comp151677_c0_seq1 250 243 .
ChrX	stalkie_big_nohaplotig	exon	52090998	52091004	100	+	.	Parent=comp151677_c0_seq1.mrna1;Target=comp151677_c0_seq1 257 251 .
ChrX	stalkie_big_nohaplotig	exon	52098083	52098094	32	+	.	Parent=comp151677_c0_seq1.mrna1;Target=comp151677_c0_seq1 294 258 .
ChrX	stalkie_big_nohaplotig	exon	52099295	52099299	100	+	.	Parent=comp151677_c0_seq1.mrna1;Target=comp151677_c0_seq1 299 295 .
ChrX	stalkie_big_nohaplotig	exon	52110437	52110440	100	+	.	Parent=comp151677_c0_seq1.mrna1;Target=comp151677_c0_seq1 303 300 .
ChrX	stalkie_big_nohaplotig	exon	52113835	52114607	99	+	.	Parent=comp151677_c0_seq1.mrna1;Target=comp151677_c0_seq1 1077 304 .
ChrX	stalkie_big_nohaplotig	CDS	52114244	52114375	.	+	0	Parent=comp151677_c0_seq1.mrna1
ChrX	gffcl	locus	52082312	52083137	.	-	.	ID=RLOC_00003034;geneIDs=FBgn0011272.1.path1;transcripts=FBgn0011272.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52082312	52083137	.	-	.	ID=FBgn0011272.1.mrna1;geneID=FBgn0011272.1.path1;Name=FBgn0011272.1;Dir=sensecoverage=100.0;identity=100.0;matches=657;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003034
ChrX	stalkie_big_nohaplotig	exon	52082312	52082413	100	-	.	Parent=FBgn0011272.1.mrna1;Target=FBgn0011272.1 556 657 +
ChrX	stalkie_big_nohaplotig	exon	52082511	52082816	100	-	.	Parent=FBgn0011272.1.mrna1;Target=FBgn0011272.1 250 555 +
ChrX	stalkie_big_nohaplotig	exon	52082889	52083137	100	-	.	Parent=FBgn0011272.1.mrna1;Target=FBgn0011272.1 1 249 +
ChrX	stalkie_big_nohaplotig	CDS	52082312	52082413	.	-	0	Parent=FBgn0011272.1.mrna1;Target=FBgn0011272.1 556 657 +
ChrX	stalkie_big_nohaplotig	CDS	52082511	52082816	.	-	0	Parent=FBgn0011272.1.mrna1;Target=FBgn0011272.1 250 555 +
ChrX	stalkie_big_nohaplotig	CDS	52082889	52083137	.	-	0	Parent=FBgn0011272.1.mrna1;Target=FBgn0011272.1 1 249 +
ChrX	gffcl	locus	52085931	52091451	.	+	.	ID=RLOC_00003035;geneIDs=FBgn0015664.1.path1;transcripts=FBgn0015664.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52085931	52091451	.	+	.	ID=FBgn0015664.1.mrna1;geneID=FBgn0015664.1.path1;Name=FBgn0015664.1;Dir=sensecoverage=99.8;identity=100.0;matches=2068;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003035
ChrX	stalkie_big_nohaplotig	exon	52085931	52086693	100	+	.	Parent=FBgn0015664.1.mrna1;Target=FBgn0015664.1 6 768 +
ChrX	stalkie_big_nohaplotig	exon	52086755	52087079	100	+	.	Parent=FBgn0015664.1.mrna1;Target=FBgn0015664.1 769 1093 +
ChrX	stalkie_big_nohaplotig	exon	52087139	52087275	100	+	.	Parent=FBgn0015664.1.mrna1;Target=FBgn0015664.1 1094 1230 +
ChrX	stalkie_big_nohaplotig	exon	52087486	52087635	100	+	.	Parent=FBgn0015664.1.mrna1;Target=FBgn0015664.1 1231 1380 +
ChrX	stalkie_big_nohaplotig	exon	52089133	52089290	100	+	.	Parent=FBgn0015664.1.mrna1;Target=FBgn0015664.1 1381 1538 +
ChrX	stalkie_big_nohaplotig	exon	52089359	52089564	100	+	.	Parent=FBgn0015664.1.mrna1;Target=FBgn0015664.1 1539 1744 +
ChrX	stalkie_big_nohaplotig	exon	52091123	52091451	100	+	.	Parent=FBgn0015664.1.mrna1;Target=FBgn0015664.1 1745 2073 +
ChrX	stalkie_big_nohaplotig	CDS	52085932	52086693	.	+	0	Parent=FBgn0015664.1.mrna1;Target=FBgn0015664.1 7 768 +
ChrX	stalkie_big_nohaplotig	CDS	52086755	52087079	.	+	0	Parent=FBgn0015664.1.mrna1;Target=FBgn0015664.1 769 1093 +
ChrX	stalkie_big_nohaplotig	CDS	52087139	52087275	.	+	2	Parent=FBgn0015664.1.mrna1;Target=FBgn0015664.1 1094 1230 +
ChrX	stalkie_big_nohaplotig	CDS	52087486	52087635	.	+	0	Parent=FBgn0015664.1.mrna1;Target=FBgn0015664.1 1231 1380 +
ChrX	stalkie_big_nohaplotig	CDS	52089133	52089290	.	+	0	Parent=FBgn0015664.1.mrna1;Target=FBgn0015664.1 1381 1538 +
ChrX	stalkie_big_nohaplotig	CDS	52089359	52089564	.	+	1	Parent=FBgn0015664.1.mrna1;Target=FBgn0015664.1 1539 1744 +
ChrX	stalkie_big_nohaplotig	CDS	52091123	52091451	.	+	2	Parent=FBgn0015664.1.mrna1;Target=FBgn0015664.1 1745 2073 +
ChrX	gffcl	locus	52092436	52092875	.	+	.	ID=RLOC_00003036;geneIDs=comp134806_c0_seq1.path1;transcripts=comp134806_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52092436	52092875	.	+	.	ID=comp134806_c0_seq1.mrna1;geneID=comp134806_c0_seq1.path1;Name=comp134806_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=433;mismatches=7;indels=4;unknowns=0;Target=comp134806_c0_seq1 444 1 .;CDS_Target=comp134806_c0_seq1 88 2 .;locus=RLOC_00003036
ChrX	stalkie_big_nohaplotig	exon	52092436	52092875	97	+	.	Parent=comp134806_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	52092437	52092523	.	+	0	Parent=comp134806_c0_seq1.mrna1
ChrX	gffcl	locus	52112045	52113303	.	-	.	ID=RLOC_00003038;geneIDs=comp159159_c0_seq1.path1;transcripts=comp159159_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52112045	52113303	.	-	.	ID=comp159159_c0_seq1.mrna1;geneID=comp159159_c0_seq1.path1;Name=comp159159_c0_seq1;Dir=indeterminatecoverage=99.3;identity=94.2;matches=1228;mismatches=21;indels=55;unknowns=0;Target=comp159159_c0_seq1 1294 1 .;CDS_Target=comp159159_c0_seq1 1102 845 .;locus=RLOC_00003038
ChrX	stalkie_big_nohaplotig	exon	52112045	52113303	94	-	.	Parent=comp159159_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	52112237	52112488	.	-	0	Parent=comp159159_c0_seq1.mrna1
ChrX	gffcl	locus	52114624	52115021	.	+	.	ID=RLOC_00003039;geneIDs=comp116141_c0_seq1.path1;transcripts=comp116141_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52114624	52115021	.	+	.	ID=comp116141_c0_seq1.mrna1;geneID=comp116141_c0_seq1.path1;Name=comp116141_c0_seq1;Dir=indeterminatecoverage=99.7;identity=96.3;matches=390;mismatches=1;indels=14;unknowns=0;Target=comp116141_c0_seq1 398 1 .;CDS_Target=comp116141_c0_seq1 61 2 .;locus=RLOC_00003039
ChrX	stalkie_big_nohaplotig	exon	52114624	52115021	96	+	.	Parent=comp116141_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	52114625	52114684	.	+	0	Parent=comp116141_c0_seq1.mrna1
ChrX	gffcl	locus	52115053	52118690	.	.	.	ID=RLOC_00003040;geneIDs=comp157630_c0_seq1.path1,comp160117_c0_seq1.path1;transcripts=comp157630_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52117370	52118690	.	+	.	ID=comp157630_c0_seq1.mrna1;geneID=comp157630_c0_seq1.path1;Name=comp157630_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=1319;mismatches=0;indels=0;unknowns=0;Target=comp157630_c0_seq1 165 43 .;locus=RLOC_00003040
ChrX	stalkie_big_nohaplotig	exon	52117370	52118109	100	+	.	Parent=comp157630_c0_seq1.mrna1;Target=comp157630_c0_seq1 740 1 .
ChrX	stalkie_big_nohaplotig	exon	52118112	52118690	100	+	.	Parent=comp157630_c0_seq1.mrna1;Target=comp157630_c0_seq1 1418 840 .
ChrX	stalkie_big_nohaplotig	CDS	52117412	52117534	.	+	0	Parent=comp157630_c0_seq1.mrna1
ChrX	gffcl	locus	52119317	52129637	.	-	.	ID=RLOC_00003041;geneIDs=FBgn0032170.1.path1;transcripts=FBgn0032170.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52119317	52129637	.	-	.	ID=FBgn0032170.1.mrna1;geneID=FBgn0032170.1.path1;Name=FBgn0032170.1;Dir=sensecoverage=100.0;identity=99.9;matches=1547;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003041
ChrX	stalkie_big_nohaplotig	exon	52119317	52119484	100	-	.	Parent=FBgn0032170.1.mrna1;Target=FBgn0032170.1 1381 1548 +
ChrX	stalkie_big_nohaplotig	exon	52127763	52127934	100	-	.	Parent=FBgn0032170.1.mrna1;Target=FBgn0032170.1 1209 1380 +
ChrX	stalkie_big_nohaplotig	exon	52128302	52128924	99	-	.	Parent=FBgn0032170.1.mrna1;Target=FBgn0032170.1 586 1208 +
ChrX	stalkie_big_nohaplotig	exon	52128985	52129269	100	-	.	Parent=FBgn0032170.1.mrna1;Target=FBgn0032170.1 301 585 +
ChrX	stalkie_big_nohaplotig	exon	52129338	52129637	100	-	.	Parent=FBgn0032170.1.mrna1;Target=FBgn0032170.1 1 300 +
ChrX	stalkie_big_nohaplotig	CDS	52119317	52119484	.	-	0	Parent=FBgn0032170.1.mrna1;Target=FBgn0032170.1 1381 1548 +
ChrX	stalkie_big_nohaplotig	CDS	52127763	52127934	.	-	1	Parent=FBgn0032170.1.mrna1;Target=FBgn0032170.1 1209 1380 +
ChrX	stalkie_big_nohaplotig	CDS	52128302	52128924	.	-	0	Parent=FBgn0032170.1.mrna1;Target=FBgn0032170.1 586 1208 +
ChrX	stalkie_big_nohaplotig	CDS	52128985	52129269	.	-	0	Parent=FBgn0032170.1.mrna1;Target=FBgn0032170.1 301 585 +
ChrX	stalkie_big_nohaplotig	CDS	52129338	52129637	.	-	0	Parent=FBgn0032170.1.mrna1;Target=FBgn0032170.1 1 300 +
ChrX	gffcl	locus	52130865	52218249	.	+	.	ID=RLOC_00003042;geneIDs=CPIJ003423.path7,FBgn0032168.1.path1,comp163982_c2_seq1.path2;transcripts=comp163982_c2_seq1.mrna2,FBgn0032168.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52130865	52218249	.	+	.	ID=comp163982_c2_seq1.mrna2;geneID=comp163982_c2_seq1.path2;Name=comp163982_c2_seq1;Dir=indeterminatecoverage=89.3;identity=98.9;matches=3548;mismatches=22;indels=16;unknowns=0;locus=RLOC_00003042
ChrX	stalkie_big_nohaplotig	exon	52130865	52134284	99	+	.	Parent=comp163982_c2_seq1.mrna2;Target=comp163982_c2_seq1 3419 1 .
ChrX	stalkie_big_nohaplotig	exon	52135081	52135099	94	+	.	Parent=comp163982_c2_seq1.mrna2;Target=comp163982_c2_seq1 3438 3420 .
ChrX	stalkie_big_nohaplotig	exon	52136746	52136806	67	+	.	Parent=comp163982_c2_seq1.mrna2;Target=comp163982_c2_seq1 3512 3439 .
ChrX	stalkie_big_nohaplotig	exon	52136816	52136826	81	+	.	Parent=comp163982_c2_seq1.mrna2;Target=comp163982_c2_seq1 3559 3549 .
ChrX	stalkie_big_nohaplotig	exon	52138846	52138854	88	+	.	Parent=comp163982_c2_seq1.mrna2;Target=comp163982_c2_seq1 3568 3560 .
ChrX	stalkie_big_nohaplotig	exon	52141476	52141478	100	+	.	Parent=comp163982_c2_seq1.mrna2;Target=comp163982_c2_seq1 3571 3569 .
ChrX	stalkie_big_nohaplotig	exon	52148495	52148496	100	+	.	Parent=comp163982_c2_seq1.mrna2;Target=comp163982_c2_seq1 3573 3572 .
ChrX	stalkie_big_nohaplotig	exon	52161597	52161605	100	+	.	Parent=comp163982_c2_seq1.mrna2;Target=comp163982_c2_seq1 3582 3574 .
ChrX	stalkie_big_nohaplotig	exon	52166471	52166475	100	+	.	Parent=comp163982_c2_seq1.mrna2;Target=comp163982_c2_seq1 3587 3583 .
ChrX	stalkie_big_nohaplotig	exon	52205936	52205943	100	+	.	Parent=comp163982_c2_seq1.mrna2;Target=comp163982_c2_seq1 3595 3588 .
ChrX	stalkie_big_nohaplotig	exon	52211080	52211082	100	+	.	Parent=comp163982_c2_seq1.mrna2;Target=comp163982_c2_seq1 3598 3596 .
ChrX	stalkie_big_nohaplotig	exon	52211110	52211117	100	+	.	Parent=comp163982_c2_seq1.mrna2;Target=comp163982_c2_seq1 3658 3651 .
ChrX	stalkie_big_nohaplotig	exon	52218228	52218235	100	+	.	Parent=comp163982_c2_seq1.mrna2;Target=comp163982_c2_seq1 3666 3659 .
ChrX	stalkie_big_nohaplotig	exon	52218244	52218249	100	+	.	Parent=comp163982_c2_seq1.mrna2;Target=comp163982_c2_seq1 3705 3700 .
ChrX	stalkie_big_nohaplotig	CDS	52132463	52134284	.	+	0	Parent=comp163982_c2_seq1.mrna2;Target=comp163982_c2_seq1 3419 1598 .
ChrX	stalkie_big_nohaplotig	CDS	52135081	52135099	.	+	2	Parent=comp163982_c2_seq1.mrna2;Target=comp163982_c2_seq1 3438 3420 .
ChrX	stalkie_big_nohaplotig	CDS	52136746	52136749	.	+	1	Parent=comp163982_c2_seq1.mrna2;Target=comp163982_c2_seq1 3442 3439 .
ChrX	stalkie_big_nohaplotig	mRNA	52148351	52150930	.	+	.	ID=FBgn0032168.1.mrna1;geneID=FBgn0032168.1.path1;Name=FBgn0032168.1;Dir=sensecoverage=100.0;identity=99.9;matches=1469;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003042
ChrX	stalkie_big_nohaplotig	exon	52148351	52149157	100	+	.	Parent=FBgn0032168.1.mrna1;Target=FBgn0032168.1 1 807 +
ChrX	stalkie_big_nohaplotig	exon	52149234	52149449	100	+	.	Parent=FBgn0032168.1.mrna1;Target=FBgn0032168.1 808 1023 +
ChrX	stalkie_big_nohaplotig	exon	52150420	52150706	100	+	.	Parent=FBgn0032168.1.mrna1;Target=FBgn0032168.1 1024 1310 +
ChrX	stalkie_big_nohaplotig	exon	52150771	52150930	99	+	.	Parent=FBgn0032168.1.mrna1;Target=FBgn0032168.1 1311 1470 +
ChrX	stalkie_big_nohaplotig	CDS	52148351	52149157	.	+	0	Parent=FBgn0032168.1.mrna1;Target=FBgn0032168.1 1 807 +
ChrX	stalkie_big_nohaplotig	CDS	52149234	52149449	.	+	0	Parent=FBgn0032168.1.mrna1;Target=FBgn0032168.1 808 1023 +
ChrX	stalkie_big_nohaplotig	CDS	52150420	52150706	.	+	0	Parent=FBgn0032168.1.mrna1;Target=FBgn0032168.1 1024 1310 +
ChrX	stalkie_big_nohaplotig	CDS	52150771	52150930	.	+	1	Parent=FBgn0032168.1.mrna1;Target=FBgn0032168.1 1311 1470 +
ChrX	gffcl	locus	52146107	52148034	.	-	.	ID=RLOC_00003044;geneIDs=FBgn0032169.1.path1;transcripts=FBgn0032169.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52146107	52148034	.	-	.	ID=FBgn0032169.1.mrna1;geneID=FBgn0032169.1.path1;Name=FBgn0032169.1;Dir=sensecoverage=100.0;identity=99.9;matches=1616;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003044
ChrX	stalkie_big_nohaplotig	exon	52146107	52146712	99	-	.	Parent=FBgn0032169.1.mrna1;Target=FBgn0032169.1 1012 1617 +
ChrX	stalkie_big_nohaplotig	exon	52146774	52146925	100	-	.	Parent=FBgn0032169.1.mrna1;Target=FBgn0032169.1 860 1011 +
ChrX	stalkie_big_nohaplotig	exon	52146998	52147472	100	-	.	Parent=FBgn0032169.1.mrna1;Target=FBgn0032169.1 385 859 +
ChrX	stalkie_big_nohaplotig	exon	52147528	52147884	100	-	.	Parent=FBgn0032169.1.mrna1;Target=FBgn0032169.1 28 384 +
ChrX	stalkie_big_nohaplotig	exon	52148008	52148034	100	-	.	Parent=FBgn0032169.1.mrna1;Target=FBgn0032169.1 1 27 +
ChrX	stalkie_big_nohaplotig	CDS	52146107	52146712	.	-	0	Parent=FBgn0032169.1.mrna1;Target=FBgn0032169.1 1012 1617 +
ChrX	stalkie_big_nohaplotig	CDS	52146774	52146925	.	-	2	Parent=FBgn0032169.1.mrna1;Target=FBgn0032169.1 860 1011 +
ChrX	stalkie_big_nohaplotig	CDS	52146998	52147472	.	-	0	Parent=FBgn0032169.1.mrna1;Target=FBgn0032169.1 385 859 +
ChrX	stalkie_big_nohaplotig	CDS	52147528	52147884	.	-	0	Parent=FBgn0032169.1.mrna1;Target=FBgn0032169.1 28 384 +
ChrX	stalkie_big_nohaplotig	CDS	52148008	52148034	.	-	0	Parent=FBgn0032169.1.mrna1;Target=FBgn0032169.1 1 27 +
ChrX	gffcl	locus	52153152	52154966	.	+	.	ID=RLOC_00003045;geneIDs=comp155791_c0_seq1.path1;transcripts=comp155791_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52153152	52154966	.	+	.	ID=comp155791_c0_seq1.mrna1;geneID=comp155791_c0_seq1.path1;Name=comp155791_c0_seq1;Dir=sensecoverage=98.8;identity=99.9;matches=1366;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003045
ChrX	stalkie_big_nohaplotig	exon	52153152	52153321	100	+	.	Parent=comp155791_c0_seq1.mrna1;Target=comp155791_c0_seq1 17 186 +
ChrX	stalkie_big_nohaplotig	exon	52153437	52153552	100	+	.	Parent=comp155791_c0_seq1.mrna1;Target=comp155791_c0_seq1 187 302 +
ChrX	stalkie_big_nohaplotig	exon	52153626	52153871	100	+	.	Parent=comp155791_c0_seq1.mrna1;Target=comp155791_c0_seq1 303 548 +
ChrX	stalkie_big_nohaplotig	exon	52154131	52154966	99	+	.	Parent=comp155791_c0_seq1.mrna1;Target=comp155791_c0_seq1 549 1384 +
ChrX	stalkie_big_nohaplotig	CDS	52153252	52153321	.	+	0	Parent=comp155791_c0_seq1.mrna1;Target=comp155791_c0_seq1 117 186 +
ChrX	stalkie_big_nohaplotig	CDS	52153437	52153552	.	+	2	Parent=comp155791_c0_seq1.mrna1;Target=comp155791_c0_seq1 187 302 +
ChrX	stalkie_big_nohaplotig	CDS	52153626	52153871	.	+	0	Parent=comp155791_c0_seq1.mrna1;Target=comp155791_c0_seq1 303 548 +
ChrX	stalkie_big_nohaplotig	CDS	52154131	52154157	.	+	0	Parent=comp155791_c0_seq1.mrna1;Target=comp155791_c0_seq1 549 575 +
ChrX	gffcl	locus	52233506	52287122	.	+	.	ID=RLOC_00003046;geneIDs=FBgn0032167.1.path1;transcripts=FBgn0032167.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52233506	52287122	.	+	.	ID=FBgn0032167.1.mrna1;geneID=FBgn0032167.1.path1;Name=FBgn0032167.1;Dir=sensecoverage=100.0;identity=100.0;matches=2097;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003046
ChrX	stalkie_big_nohaplotig	exon	52233506	52233896	100	+	.	Parent=FBgn0032167.1.mrna1;Target=FBgn0032167.1 1 391 +
ChrX	stalkie_big_nohaplotig	exon	52281084	52281254	100	+	.	Parent=FBgn0032167.1.mrna1;Target=FBgn0032167.1 392 562 +
ChrX	stalkie_big_nohaplotig	exon	52281433	52281569	100	+	.	Parent=FBgn0032167.1.mrna1;Target=FBgn0032167.1 563 699 +
ChrX	stalkie_big_nohaplotig	exon	52281625	52281770	100	+	.	Parent=FBgn0032167.1.mrna1;Target=FBgn0032167.1 700 845 +
ChrX	stalkie_big_nohaplotig	exon	52281933	52282171	100	+	.	Parent=FBgn0032167.1.mrna1;Target=FBgn0032167.1 846 1084 +
ChrX	stalkie_big_nohaplotig	exon	52282301	52282711	100	+	.	Parent=FBgn0032167.1.mrna1;Target=FBgn0032167.1 1085 1495 +
ChrX	stalkie_big_nohaplotig	exon	52285169	52285269	100	+	.	Parent=FBgn0032167.1.mrna1;Target=FBgn0032167.1 1496 1596 +
ChrX	stalkie_big_nohaplotig	exon	52285342	52285497	100	+	.	Parent=FBgn0032167.1.mrna1;Target=FBgn0032167.1 1597 1752 +
ChrX	stalkie_big_nohaplotig	exon	52286722	52286927	100	+	.	Parent=FBgn0032167.1.mrna1;Target=FBgn0032167.1 1753 1958 +
ChrX	stalkie_big_nohaplotig	exon	52286984	52287122	100	+	.	Parent=FBgn0032167.1.mrna1;Target=FBgn0032167.1 1959 2097 +
ChrX	stalkie_big_nohaplotig	CDS	52233506	52233896	.	+	0	Parent=FBgn0032167.1.mrna1;Target=FBgn0032167.1 1 391 +
ChrX	stalkie_big_nohaplotig	CDS	52281084	52281254	.	+	2	Parent=FBgn0032167.1.mrna1;Target=FBgn0032167.1 392 562 +
ChrX	stalkie_big_nohaplotig	CDS	52281433	52281569	.	+	2	Parent=FBgn0032167.1.mrna1;Target=FBgn0032167.1 563 699 +
ChrX	stalkie_big_nohaplotig	CDS	52281625	52281770	.	+	0	Parent=FBgn0032167.1.mrna1;Target=FBgn0032167.1 700 845 +
ChrX	stalkie_big_nohaplotig	CDS	52281933	52282171	.	+	1	Parent=FBgn0032167.1.mrna1;Target=FBgn0032167.1 846 1084 +
ChrX	stalkie_big_nohaplotig	CDS	52282301	52282711	.	+	2	Parent=FBgn0032167.1.mrna1;Target=FBgn0032167.1 1085 1495 +
ChrX	stalkie_big_nohaplotig	CDS	52285169	52285269	.	+	2	Parent=FBgn0032167.1.mrna1;Target=FBgn0032167.1 1496 1596 +
ChrX	stalkie_big_nohaplotig	CDS	52285342	52285497	.	+	0	Parent=FBgn0032167.1.mrna1;Target=FBgn0032167.1 1597 1752 +
ChrX	stalkie_big_nohaplotig	CDS	52286722	52286927	.	+	0	Parent=FBgn0032167.1.mrna1;Target=FBgn0032167.1 1753 1958 +
ChrX	stalkie_big_nohaplotig	CDS	52286984	52287122	.	+	1	Parent=FBgn0032167.1.mrna1;Target=FBgn0032167.1 1959 2097 +
ChrX	gffcl	locus	52289431	52291483	.	+	.	ID=RLOC_00003047;geneIDs=comp160559_c0_seq1.path1;transcripts=comp160559_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52289431	52291483	.	+	.	ID=comp160559_c0_seq1.mrna1;geneID=comp160559_c0_seq1.path1;Name=comp160559_c0_seq1;Dir=sensecoverage=98.6;identity=98.5;matches=1699;mismatches=26;indels=0;unknowns=0;Target=comp160559_c0_seq1 203 796 +;locus=RLOC_00003047
ChrX	stalkie_big_nohaplotig	exon	52289431	52290480	98	+	.	Parent=comp160559_c0_seq1.mrna1;Target=comp160559_c0_seq1 12 1061 +
ChrX	stalkie_big_nohaplotig	exon	52290707	52290894	97	+	.	Parent=comp160559_c0_seq1.mrna1;Target=comp160559_c0_seq1 1062 1249 +
ChrX	stalkie_big_nohaplotig	exon	52290997	52291483	98	+	.	Parent=comp160559_c0_seq1.mrna1;Target=comp160559_c0_seq1 1250 1736 +
ChrX	stalkie_big_nohaplotig	CDS	52289622	52290215	.	+	0	Parent=comp160559_c0_seq1.mrna1
ChrX	gffcl	locus	52292803	52293411	.	-	.	ID=RLOC_00003048;geneIDs=FBgn0051713.1.path1;transcripts=FBgn0051713.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52292803	52293411	.	-	.	ID=FBgn0051713.1.mrna1;geneID=FBgn0051713.1.path1;Name=FBgn0051713.1;Dir=sensecoverage=100.0;identity=100.0;matches=492;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003048
ChrX	stalkie_big_nohaplotig	exon	52292803	52293049	100	-	.	Parent=FBgn0051713.1.mrna1;Target=FBgn0051713.1 246 492 +
ChrX	stalkie_big_nohaplotig	exon	52293167	52293411	100	-	.	Parent=FBgn0051713.1.mrna1;Target=FBgn0051713.1 1 245 +
ChrX	stalkie_big_nohaplotig	CDS	52292803	52293049	.	-	1	Parent=FBgn0051713.1.mrna1;Target=FBgn0051713.1 246 492 +
ChrX	stalkie_big_nohaplotig	CDS	52293167	52293411	.	-	0	Parent=FBgn0051713.1.mrna1;Target=FBgn0051713.1 1 245 +
ChrX	gffcl	locus	52295361	52297592	.	+	.	ID=RLOC_00003049;geneIDs=FBgn0032166.1.path1;transcripts=FBgn0032166.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52295361	52297592	.	+	.	ID=FBgn0032166.1.mrna1;geneID=FBgn0032166.1.path1;Name=FBgn0032166.1;Dir=sensecoverage=100.0;identity=100.0;matches=1854;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003049
ChrX	stalkie_big_nohaplotig	exon	52295361	52297061	100	+	.	Parent=FBgn0032166.1.mrna1;Target=FBgn0032166.1 1 1701 +
ChrX	stalkie_big_nohaplotig	exon	52297440	52297592	100	+	.	Parent=FBgn0032166.1.mrna1;Target=FBgn0032166.1 1702 1854 +
ChrX	stalkie_big_nohaplotig	CDS	52295361	52297061	.	+	0	Parent=FBgn0032166.1.mrna1;Target=FBgn0032166.1 1 1701 +
ChrX	stalkie_big_nohaplotig	CDS	52297440	52297592	.	+	0	Parent=FBgn0032166.1.mrna1;Target=FBgn0032166.1 1702 1854 +
ChrX	gffcl	locus	52306790	52319653	.	+	.	ID=RLOC_00003050;geneIDs=FBgn0010309.1.path1,comp157046_c0_seq1.path1;transcripts=FBgn0010309.1.mrna1,comp157046_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52306790	52319549	.	+	.	ID=FBgn0010309.1.mrna1;geneID=FBgn0010309.1.path1;Name=FBgn0010309.1;Dir=sensecoverage=100.0;identity=100.0;matches=2858;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003050
ChrX	stalkie_big_nohaplotig	exon	52306790	52306886	100	+	.	Parent=FBgn0010309.1.mrna1;Target=FBgn0010309.1 1 97 +
ChrX	stalkie_big_nohaplotig	exon	52312195	52312629	100	+	.	Parent=FBgn0010309.1.mrna1;Target=FBgn0010309.1 98 532 +
ChrX	stalkie_big_nohaplotig	exon	52312703	52313019	100	+	.	Parent=FBgn0010309.1.mrna1;Target=FBgn0010309.1 533 849 +
ChrX	stalkie_big_nohaplotig	exon	52313276	52314481	100	+	.	Parent=FBgn0010309.1.mrna1;Target=FBgn0010309.1 850 2055 +
ChrX	stalkie_big_nohaplotig	exon	52314596	52314828	100	+	.	Parent=FBgn0010309.1.mrna1;Target=FBgn0010309.1 2056 2288 +
ChrX	stalkie_big_nohaplotig	exon	52314891	52315105	99	+	.	Parent=FBgn0010309.1.mrna1;Target=FBgn0010309.1 2289 2503 +
ChrX	stalkie_big_nohaplotig	exon	52315179	52315400	100	+	.	Parent=FBgn0010309.1.mrna1;Target=FBgn0010309.1 2504 2725 +
ChrX	stalkie_big_nohaplotig	exon	52319416	52319549	100	+	.	Parent=FBgn0010309.1.mrna1;Target=FBgn0010309.1 2726 2859 +
ChrX	stalkie_big_nohaplotig	CDS	52306790	52306886	.	+	0	Parent=FBgn0010309.1.mrna1;Target=FBgn0010309.1 1 97 +
ChrX	stalkie_big_nohaplotig	CDS	52312195	52312629	.	+	2	Parent=FBgn0010309.1.mrna1;Target=FBgn0010309.1 98 532 +
ChrX	stalkie_big_nohaplotig	CDS	52312703	52313019	.	+	2	Parent=FBgn0010309.1.mrna1;Target=FBgn0010309.1 533 849 +
ChrX	stalkie_big_nohaplotig	CDS	52313276	52314481	.	+	0	Parent=FBgn0010309.1.mrna1;Target=FBgn0010309.1 850 2055 +
ChrX	stalkie_big_nohaplotig	CDS	52314596	52314828	.	+	0	Parent=FBgn0010309.1.mrna1;Target=FBgn0010309.1 2056 2288 +
ChrX	stalkie_big_nohaplotig	CDS	52314891	52315105	.	+	1	Parent=FBgn0010309.1.mrna1;Target=FBgn0010309.1 2289 2503 +
ChrX	stalkie_big_nohaplotig	CDS	52315179	52315400	.	+	2	Parent=FBgn0010309.1.mrna1;Target=FBgn0010309.1 2504 2725 +
ChrX	stalkie_big_nohaplotig	CDS	52319416	52319549	.	+	2	Parent=FBgn0010309.1.mrna1;Target=FBgn0010309.1 2726 2859 +
ChrX	stalkie_big_nohaplotig	mRNA	52311700	52319653	.	+	.	ID=comp157046_c0_seq1.mrna1;geneID=comp157046_c0_seq1.path1;Name=comp157046_c0_seq1;Dir=sensecoverage=99.9;identity=99.9;matches=3418;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003050
ChrX	stalkie_big_nohaplotig	exon	52311700	52312121	99	+	.	Parent=comp157046_c0_seq1.mrna1;Target=comp157046_c0_seq1 3 424 +
ChrX	stalkie_big_nohaplotig	exon	52312195	52312629	100	+	.	Parent=comp157046_c0_seq1.mrna1;Target=comp157046_c0_seq1 425 859 +
ChrX	stalkie_big_nohaplotig	exon	52312703	52313019	100	+	.	Parent=comp157046_c0_seq1.mrna1;Target=comp157046_c0_seq1 860 1176 +
ChrX	stalkie_big_nohaplotig	exon	52313276	52314481	100	+	.	Parent=comp157046_c0_seq1.mrna1;Target=comp157046_c0_seq1 1177 2382 +
ChrX	stalkie_big_nohaplotig	exon	52314596	52314828	100	+	.	Parent=comp157046_c0_seq1.mrna1;Target=comp157046_c0_seq1 2383 2615 +
ChrX	stalkie_big_nohaplotig	exon	52314891	52315105	99	+	.	Parent=comp157046_c0_seq1.mrna1;Target=comp157046_c0_seq1 2616 2830 +
ChrX	stalkie_big_nohaplotig	exon	52315179	52315400	100	+	.	Parent=comp157046_c0_seq1.mrna1;Target=comp157046_c0_seq1 2831 3052 +
ChrX	stalkie_big_nohaplotig	exon	52317074	52317205	100	+	.	Parent=comp157046_c0_seq1.mrna1;Target=comp157046_c0_seq1 3053 3184 +
ChrX	stalkie_big_nohaplotig	exon	52319416	52319653	100	+	.	Parent=comp157046_c0_seq1.mrna1;Target=comp157046_c0_seq1 3185 3422 +
ChrX	stalkie_big_nohaplotig	CDS	52312058	52312121	.	+	0	Parent=comp157046_c0_seq1.mrna1;Target=comp157046_c0_seq1 361 424 +
ChrX	stalkie_big_nohaplotig	CDS	52312195	52312629	.	+	2	Parent=comp157046_c0_seq1.mrna1;Target=comp157046_c0_seq1 425 859 +
ChrX	stalkie_big_nohaplotig	CDS	52312703	52313019	.	+	2	Parent=comp157046_c0_seq1.mrna1;Target=comp157046_c0_seq1 860 1176 +
ChrX	stalkie_big_nohaplotig	CDS	52313276	52314481	.	+	0	Parent=comp157046_c0_seq1.mrna1;Target=comp157046_c0_seq1 1177 2382 +
ChrX	stalkie_big_nohaplotig	CDS	52314596	52314828	.	+	0	Parent=comp157046_c0_seq1.mrna1;Target=comp157046_c0_seq1 2383 2615 +
ChrX	stalkie_big_nohaplotig	CDS	52314891	52315105	.	+	1	Parent=comp157046_c0_seq1.mrna1;Target=comp157046_c0_seq1 2616 2830 +
ChrX	stalkie_big_nohaplotig	CDS	52315179	52315400	.	+	2	Parent=comp157046_c0_seq1.mrna1;Target=comp157046_c0_seq1 2831 3052 +
ChrX	stalkie_big_nohaplotig	CDS	52317074	52317192	.	+	2	Parent=comp157046_c0_seq1.mrna1;Target=comp157046_c0_seq1 3053 3171 +
ChrX	gffcl	locus	52339043	52341438	.	-	.	ID=RLOC_00003051;geneIDs=comp152696_c0_seq1.path1;transcripts=comp152696_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52339043	52341438	.	-	.	ID=comp152696_c0_seq1.mrna1;geneID=comp152696_c0_seq1.path1;Name=comp152696_c0_seq1;Dir=antisensecoverage=99.2;identity=100.0;matches=1223;mismatches=0;indels=0;unknowns=0;Target=comp152696_c0_seq1 409 1125 .;locus=RLOC_00003051
ChrX	stalkie_big_nohaplotig	exon	52339043	52339265	100	-	.	Parent=comp152696_c0_seq1.mrna1;Target=comp152696_c0_seq1 3 225 -
ChrX	stalkie_big_nohaplotig	exon	52339321	52339494	100	-	.	Parent=comp152696_c0_seq1.mrna1;Target=comp152696_c0_seq1 226 399 -
ChrX	stalkie_big_nohaplotig	exon	52340613	52341438	100	-	.	Parent=comp152696_c0_seq1.mrna1;Target=comp152696_c0_seq1 400 1225 -
ChrX	stalkie_big_nohaplotig	CDS	52340622	52341338	.	-	0	Parent=comp152696_c0_seq1.mrna1
ChrX	gffcl	locus	52505034	52508571	.	+	.	ID=RLOC_00003053;geneIDs=FBgn0015380.1.path1;transcripts=FBgn0015380.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52505034	52508571	.	+	.	ID=FBgn0015380.1.mrna1;geneID=FBgn0015380.1.path1;Name=FBgn0015380.1;Dir=sensecoverage=92.7;identity=99.9;matches=1732;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003053
ChrX	stalkie_big_nohaplotig	exon	52505034	52506360	99	+	.	Parent=FBgn0015380.1.mrna1;Target=FBgn0015380.1 137 1463 +
ChrX	stalkie_big_nohaplotig	exon	52507922	52508218	100	+	.	Parent=FBgn0015380.1.mrna1;Target=FBgn0015380.1 1464 1760 +
ChrX	stalkie_big_nohaplotig	exon	52508463	52508571	100	+	.	Parent=FBgn0015380.1.mrna1;Target=FBgn0015380.1 1761 1869 +
ChrX	stalkie_big_nohaplotig	CDS	52505036	52506360	.	+	0	Parent=FBgn0015380.1.mrna1;Target=FBgn0015380.1 139 1463 +
ChrX	stalkie_big_nohaplotig	CDS	52507922	52508218	.	+	1	Parent=FBgn0015380.1.mrna1;Target=FBgn0015380.1 1464 1760 +
ChrX	stalkie_big_nohaplotig	CDS	52508463	52508571	.	+	1	Parent=FBgn0015380.1.mrna1;Target=FBgn0015380.1 1761 1869 +
ChrX	gffcl	locus	52509004	52509775	.	+	.	ID=RLOC_00003054;geneIDs=comp152595_c0_seq1.path1;transcripts=comp152595_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52509004	52509775	.	+	.	ID=comp152595_c0_seq1.mrna1;geneID=comp152595_c0_seq1.path1;Name=comp152595_c0_seq1;Dir=indeterminatecoverage=98.7;identity=99.0;matches=766;mismatches=6;indels=2;unknowns=0;Target=comp152595_c0_seq1 784 11 .;CDS_Target=comp152595_c0_seq1 347 267 .;locus=RLOC_00003054
ChrX	stalkie_big_nohaplotig	exon	52509004	52509775	98	+	.	Parent=comp152595_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	52509258	52509338	.	+	0	Parent=comp152595_c0_seq1.mrna1
ChrX	gffcl	locus	52514910	52515468	.	-	.	ID=RLOC_00003055;geneIDs=comp117269_c0_seq1.path1;transcripts=comp117269_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52514910	52515468	.	-	.	ID=comp117269_c0_seq1.mrna1;geneID=comp117269_c0_seq1.path1;Name=comp117269_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=556;mismatches=3;indels=0;unknowns=0;Target=comp117269_c0_seq1 559 1 .;CDS_Target=comp117269_c0_seq1 129 1 .;locus=RLOC_00003055
ChrX	stalkie_big_nohaplotig	exon	52514910	52515468	99	-	.	Parent=comp117269_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	52515340	52515468	.	-	0	Parent=comp117269_c0_seq1.mrna1
ChrX	gffcl	locus	52516264	52516696	.	+	.	ID=RLOC_00003056;geneIDs=comp71263_c0_seq1.path1,comp816464_c0_seq1.path1;transcripts=comp816464_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52516264	52516486	.	+	.	ID=comp816464_c0_seq1.mrna1;geneID=comp816464_c0_seq1.path1;Name=comp816464_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=222;mismatches=1;indels=0;unknowns=0;Target=comp816464_c0_seq1 223 1 .;CDS_Target=comp816464_c0_seq1 48 1 .;locus=RLOC_00003056
ChrX	stalkie_big_nohaplotig	exon	52516264	52516486	99	+	.	Parent=comp816464_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	52516264	52516311	.	+	0	Parent=comp816464_c0_seq1.mrna1
ChrX	gffcl	locus	52522343	52522719	.	-	.	ID=RLOC_00003057;geneIDs=comp140269_c0_seq1.path2;transcripts=comp140269_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	52522343	52522719	.	-	.	ID=comp140269_c0_seq1.mrna2;geneID=comp140269_c0_seq1.path2;Name=comp140269_c0_seq1;Dir=indeterminatecoverage=86.2;identity=98.9;matches=373;mismatches=3;indels=1;unknowns=0;Target=comp140269_c0_seq1 436 61 .;CDS_Target=comp140269_c0_seq1 179 61 .;locus=RLOC_00003057
ChrX	stalkie_big_nohaplotig	exon	52522343	52522719	98	-	.	Parent=comp140269_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	52522600	52522719	.	-	1	Parent=comp140269_c0_seq1.mrna2
ChrX	gffcl	locus	52523488	52765064	.	-	.	ID=RLOC_00003058;geneIDs=FBgn0024245.1.path1;transcripts=FBgn0024245.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52523488	52765064	.	-	.	ID=FBgn0024245.1.mrna1;geneID=FBgn0024245.1.path1;Name=FBgn0024245.1;Dir=sensecoverage=100.0;identity=99.9;matches=1871;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003058
ChrX	stalkie_big_nohaplotig	exon	52523488	52523596	99	-	.	Parent=FBgn0024245.1.mrna1;Target=FBgn0024245.1 1764 1872 +
ChrX	stalkie_big_nohaplotig	exon	52523703	52523999	100	-	.	Parent=FBgn0024245.1.mrna1;Target=FBgn0024245.1 1467 1763 +
ChrX	stalkie_big_nohaplotig	exon	52524507	52525620	100	-	.	Parent=FBgn0024245.1.mrna1;Target=FBgn0024245.1 353 1466 +
ChrX	stalkie_big_nohaplotig	exon	52764713	52765064	100	-	.	Parent=FBgn0024245.1.mrna1;Target=FBgn0024245.1 1 352 +
ChrX	stalkie_big_nohaplotig	CDS	52523488	52523596	.	-	1	Parent=FBgn0024245.1.mrna1;Target=FBgn0024245.1 1764 1872 +
ChrX	stalkie_big_nohaplotig	CDS	52523703	52523999	.	-	1	Parent=FBgn0024245.1.mrna1;Target=FBgn0024245.1 1467 1763 +
ChrX	stalkie_big_nohaplotig	CDS	52524507	52525620	.	-	2	Parent=FBgn0024245.1.mrna1;Target=FBgn0024245.1 353 1466 +
ChrX	stalkie_big_nohaplotig	CDS	52764713	52765064	.	-	0	Parent=FBgn0024245.1.mrna1;Target=FBgn0024245.1 1 352 +
ChrX	gffcl	locus	52709648	52974732	.	-	.	ID=RLOC_00003059;geneIDs=comp163374_c0_seq1.path1;transcripts=comp163374_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52709648	52974732	.	-	.	ID=comp163374_c0_seq1.mrna1;geneID=comp163374_c0_seq1.path1;Name=comp163374_c0_seq1;Dir=sensecoverage=96.0;identity=96.0;matches=1721;mismatches=17;indels=54;unknowns=0;Target=comp163374_c0_seq1 424 492 +;locus=RLOC_00003059
ChrX	stalkie_big_nohaplotig	exon	52709648	52709659	100	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 2009 2020 +
ChrX	stalkie_big_nohaplotig	exon	52713572	52713573	100	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 2007 2008 +
ChrX	stalkie_big_nohaplotig	exon	52714351	52714355	100	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 2002 2006 +
ChrX	stalkie_big_nohaplotig	exon	52720011	52720016	100	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 1996 2001 +
ChrX	stalkie_big_nohaplotig	exon	52721791	52721798	100	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 1988 1995 +
ChrX	stalkie_big_nohaplotig	exon	52724281	52724284	100	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 1984 1987 +
ChrX	stalkie_big_nohaplotig	exon	52731001	52731002	100	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 1982 1983 +
ChrX	stalkie_big_nohaplotig	exon	52731131	52731140	100	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 1964 1973 +
ChrX	stalkie_big_nohaplotig	exon	52731764	52731765	100	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 1962 1963 +
ChrX	stalkie_big_nohaplotig	exon	52732079	52732087	100	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 1950 1958 +
ChrX	stalkie_big_nohaplotig	exon	52732123	52732131	100	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 1904 1912 +
ChrX	stalkie_big_nohaplotig	exon	52735506	52735513	100	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 1883 1890 +
ChrX	stalkie_big_nohaplotig	exon	52735520	52735532	100	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 1840 1852 +
ChrX	stalkie_big_nohaplotig	exon	52735705	52735712	100	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 1787 1794 +
ChrX	stalkie_big_nohaplotig	exon	52735730	52735737	100	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 1745 1752 +
ChrX	stalkie_big_nohaplotig	exon	52735799	52735802	100	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 1741 1744 +
ChrX	stalkie_big_nohaplotig	exon	52738760	52738767	100	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 1682 1689 +
ChrX	stalkie_big_nohaplotig	exon	52738803	52738810	100	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 1635 1642 +
ChrX	stalkie_big_nohaplotig	exon	52738964	52738966	100	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 1632 1634 +
ChrX	stalkie_big_nohaplotig	exon	52739276	52739277	100	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 1630 1631 +
ChrX	stalkie_big_nohaplotig	exon	52747086	52747088	100	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 1627 1629 +
ChrX	stalkie_big_nohaplotig	exon	52747703	52747717	93	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 1611 1626 +
ChrX	stalkie_big_nohaplotig	exon	52751947	52752002	30	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 1594 1610 +
ChrX	stalkie_big_nohaplotig	exon	52971982	52972361	98	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 1214 1593 +
ChrX	stalkie_big_nohaplotig	exon	52972667	52972861	98	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 1019 1213 +
ChrX	stalkie_big_nohaplotig	exon	52973330	52973958	98	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 386 1018 +
ChrX	stalkie_big_nohaplotig	exon	52974246	52974376	93	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 263 385 +
ChrX	stalkie_big_nohaplotig	exon	52974429	52974496	100	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 195 262 +
ChrX	stalkie_big_nohaplotig	exon	52974557	52974732	98	-	.	Parent=comp163374_c0_seq1.mrna1;Target=comp163374_c0_seq1 17 194 +
ChrX	stalkie_big_nohaplotig	CDS	52973856	52973920	.	-	0	Parent=comp163374_c0_seq1.mrna1
ChrX	gffcl	locus	52767405	52772017	.	+	.	ID=RLOC_00003060;geneIDs=FBgn0050357.3.path1,comp159766_c0_seq1.path1;transcripts=comp159766_c0_seq1.mrna1,FBgn0050357.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52767405	52772017	.	+	.	ID=comp159766_c0_seq1.mrna1;geneID=comp159766_c0_seq1.path1;Name=comp159766_c0_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=1790;mismatches=13;indels=3;unknowns=0;locus=RLOC_00003060
ChrX	stalkie_big_nohaplotig	exon	52767405	52767582	98	+	.	Parent=comp159766_c0_seq1.mrna1;Target=comp159766_c0_seq1 1628 1805 -
ChrX	stalkie_big_nohaplotig	exon	52770251	52770407	100	+	.	Parent=comp159766_c0_seq1.mrna1;Target=comp159766_c0_seq1 1471 1627 -
ChrX	stalkie_big_nohaplotig	exon	52770549	52772017	99	+	.	Parent=comp159766_c0_seq1.mrna1;Target=comp159766_c0_seq1 1 1470 -
ChrX	stalkie_big_nohaplotig	CDS	52770324	52770407	.	+	0	Parent=comp159766_c0_seq1.mrna1;Target=comp159766_c0_seq1 1471 1554 .
ChrX	stalkie_big_nohaplotig	CDS	52770549	52771853	.	+	0	Parent=comp159766_c0_seq1.mrna1;Target=comp159766_c0_seq1 166 1470 .
ChrX	stalkie_big_nohaplotig	mRNA	52770285	52771850	.	+	.	ID=FBgn0050357.3.mrna1;geneID=FBgn0050357.3.path1;Name=FBgn0050357.3;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1417;mismatches=8;indels=0;unknowns=0;locus=RLOC_00003060
ChrX	stalkie_big_nohaplotig	exon	52770285	52770416	99	+	.	Parent=FBgn0050357.3.mrna1;Target=FBgn0050357.3 132 1 .
ChrX	stalkie_big_nohaplotig	exon	52770558	52771850	99	+	.	Parent=FBgn0050357.3.mrna1;Target=FBgn0050357.3 1425 133 .
ChrX	stalkie_big_nohaplotig	CDS	52770285	52770416	.	+	0	Parent=FBgn0050357.3.mrna1;Target=FBgn0050357.3 132 1 .
ChrX	stalkie_big_nohaplotig	CDS	52770558	52771850	.	+	0	Parent=FBgn0050357.3.mrna1;Target=FBgn0050357.3 1425 133 .
ChrX	gffcl	locus	52830414	52831315	.	-	.	ID=RLOC_00003061;geneIDs=comp153614_c2_seq1.path1;transcripts=comp153614_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52830414	52831315	.	-	.	ID=comp153614_c2_seq1.mrna1;geneID=comp153614_c2_seq1.path1;Name=comp153614_c2_seq1;Dir=indeterminatecoverage=90.0;identity=92.7;matches=880;mismatches=20;indels=49;unknowns=0;Target=comp153614_c2_seq1 1052 106 .;CDS_Target=comp153614_c2_seq1 117 112 .;locus=RLOC_00003061
ChrX	stalkie_big_nohaplotig	exon	52830414	52831315	92	-	.	Parent=comp153614_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	52831305	52831309	.	-	0	Parent=comp153614_c2_seq1.mrna1
ChrX	gffcl	locus	52840549	52841453	.	+	.	ID=RLOC_00003062;geneIDs=comp152142_c0_seq1.path1;transcripts=comp152142_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52840549	52841453	.	+	.	ID=comp152142_c0_seq1.mrna1;geneID=comp152142_c0_seq1.path1;Name=comp152142_c0_seq1;Dir=indeterminatecoverage=95.6;identity=99.0;matches=896;mismatches=9;indels=0;unknowns=0;Target=comp152142_c0_seq1 947 43 .;CDS_Target=comp152142_c0_seq1 243 85 .;locus=RLOC_00003062
ChrX	stalkie_big_nohaplotig	exon	52840549	52841453	99	+	.	Parent=comp152142_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	52840591	52840749	.	+	0	Parent=comp152142_c0_seq1.mrna1
ChrX	gffcl	locus	52847915	52848790	.	-	.	ID=RLOC_00003063;geneIDs=ORF2230.path1;transcripts=ORF2230.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52847915	52848790	.	-	.	ID=ORF2230.mrna1;geneID=ORF2230.path1;Name=ORF2230;Dir=indeterminatecoverage=100.0;identity=97.3;matches=870;mismatches=6;indels=18;unknowns=0;Target=ORF2230 894 1 .;locus=RLOC_00003063
ChrX	stalkie_big_nohaplotig	exon	52847915	52848790	97	-	.	Parent=ORF2230.mrna1
ChrX	stalkie_big_nohaplotig	CDS	52847915	52848790	.	-	0	Parent=ORF2230.mrna1
ChrX	gffcl	locus	52853368	52859025	.	+	.	ID=RLOC_00003064;geneIDs=FBgn0032772.1.path1;transcripts=FBgn0032772.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52853368	52859025	.	+	.	ID=FBgn0032772.1.mrna1;geneID=FBgn0032772.1.path1;Name=FBgn0032772.1;Dir=sensecoverage=100.0;identity=96.6;matches=1014;mismatches=0;indels=36;unknowns=0;locus=RLOC_00003064
ChrX	stalkie_big_nohaplotig	exon	52853368	52853503	100	+	.	Parent=FBgn0032772.1.mrna1;Target=FBgn0032772.1 1 136 +
ChrX	stalkie_big_nohaplotig	exon	52856425	52856706	88	+	.	Parent=FBgn0032772.1.mrna1;Target=FBgn0032772.1 137 385 +
ChrX	stalkie_big_nohaplotig	exon	52856893	52857033	100	+	.	Parent=FBgn0032772.1.mrna1;Target=FBgn0032772.1 386 526 +
ChrX	stalkie_big_nohaplotig	exon	52858538	52859025	99	+	.	Parent=FBgn0032772.1.mrna1;Target=FBgn0032772.1 527 1017 +
ChrX	stalkie_big_nohaplotig	CDS	52853368	52853503	.	+	0	Parent=FBgn0032772.1.mrna1;Target=FBgn0032772.1 1 136 +
ChrX	stalkie_big_nohaplotig	CDS	52856425	52856706	.	+	2	Parent=FBgn0032772.1.mrna1;Target=FBgn0032772.1 137 385 +
ChrX	stalkie_big_nohaplotig	CDS	52856893	52857033	.	+	2	Parent=FBgn0032772.1.mrna1;Target=FBgn0032772.1 386 526 +
ChrX	stalkie_big_nohaplotig	CDS	52858538	52859025	.	+	2	Parent=FBgn0032772.1.mrna1;Target=FBgn0032772.1 527 1017 +
ChrX	gffcl	locus	52860865	52869212	.	-	.	ID=RLOC_00003065;geneIDs=Dv_FBgn0205148.1.path1;transcripts=Dv_FBgn0205148.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52860865	52869212	.	-	.	ID=Dv_FBgn0205148.1.mrna1;geneID=Dv_FBgn0205148.1.path1;Name=Dv_FBgn0205148.1;Dir=sensecoverage=100.0;identity=99.6;matches=1810;mismatches=8;indels=0;unknowns=0;locus=RLOC_00003065
ChrX	stalkie_big_nohaplotig	exon	52860865	52861014	98	-	.	Parent=Dv_FBgn0205148.1.mrna1;Target=Dv_FBgn0205148.1 1669 1818 +
ChrX	stalkie_big_nohaplotig	exon	52861075	52861490	99	-	.	Parent=Dv_FBgn0205148.1.mrna1;Target=Dv_FBgn0205148.1 1253 1668 +
ChrX	stalkie_big_nohaplotig	exon	52861550	52861660	100	-	.	Parent=Dv_FBgn0205148.1.mrna1;Target=Dv_FBgn0205148.1 1142 1252 +
ChrX	stalkie_big_nohaplotig	exon	52861743	52862725	99	-	.	Parent=Dv_FBgn0205148.1.mrna1;Target=Dv_FBgn0205148.1 159 1141 +
ChrX	stalkie_big_nohaplotig	exon	52863220	52863285	100	-	.	Parent=Dv_FBgn0205148.1.mrna1;Target=Dv_FBgn0205148.1 93 158 +
ChrX	stalkie_big_nohaplotig	exon	52865006	52865029	100	-	.	Parent=Dv_FBgn0205148.1.mrna1;Target=Dv_FBgn0205148.1 69 92 +
ChrX	stalkie_big_nohaplotig	exon	52865158	52865173	100	-	.	Parent=Dv_FBgn0205148.1.mrna1;Target=Dv_FBgn0205148.1 53 68 +
ChrX	stalkie_big_nohaplotig	exon	52869161	52869212	100	-	.	Parent=Dv_FBgn0205148.1.mrna1;Target=Dv_FBgn0205148.1 1 52 +
ChrX	stalkie_big_nohaplotig	CDS	52860865	52861014	.	-	0	Parent=Dv_FBgn0205148.1.mrna1;Target=Dv_FBgn0205148.1 1669 1818 +
ChrX	stalkie_big_nohaplotig	CDS	52861075	52861490	.	-	2	Parent=Dv_FBgn0205148.1.mrna1;Target=Dv_FBgn0205148.1 1253 1668 +
ChrX	stalkie_big_nohaplotig	CDS	52861550	52861660	.	-	2	Parent=Dv_FBgn0205148.1.mrna1;Target=Dv_FBgn0205148.1 1142 1252 +
ChrX	stalkie_big_nohaplotig	CDS	52861743	52862725	.	-	1	Parent=Dv_FBgn0205148.1.mrna1;Target=Dv_FBgn0205148.1 159 1141 +
ChrX	stalkie_big_nohaplotig	CDS	52863220	52863285	.	-	1	Parent=Dv_FBgn0205148.1.mrna1;Target=Dv_FBgn0205148.1 93 158 +
ChrX	stalkie_big_nohaplotig	CDS	52865006	52865029	.	-	1	Parent=Dv_FBgn0205148.1.mrna1;Target=Dv_FBgn0205148.1 69 92 +
ChrX	stalkie_big_nohaplotig	CDS	52865158	52865173	.	-	2	Parent=Dv_FBgn0205148.1.mrna1;Target=Dv_FBgn0205148.1 53 68 +
ChrX	stalkie_big_nohaplotig	CDS	52869161	52869212	.	-	0	Parent=Dv_FBgn0205148.1.mrna1;Target=Dv_FBgn0205148.1 1 52 +
ChrX	gffcl	locus	52879507	52880792	.	-	.	ID=RLOC_00003066;geneIDs=FBgn0032774.1.path1;transcripts=FBgn0032774.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52879507	52880792	.	-	.	ID=FBgn0032774.1.mrna1;geneID=FBgn0032774.1.path1;Name=FBgn0032774.1;Dir=sensecoverage=97.1;identity=99.7;matches=630;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003066
ChrX	stalkie_big_nohaplotig	exon	52879507	52879683	100	-	.	Parent=FBgn0032774.1.mrna1;Target=FBgn0032774.1 475 651 +
ChrX	stalkie_big_nohaplotig	exon	52879771	52879948	100	-	.	Parent=FBgn0032774.1.mrna1;Target=FBgn0032774.1 297 474 +
ChrX	stalkie_big_nohaplotig	exon	52880362	52880578	99	-	.	Parent=FBgn0032774.1.mrna1;Target=FBgn0032774.1 80 296 +
ChrX	stalkie_big_nohaplotig	exon	52880733	52880792	98	-	.	Parent=FBgn0032774.1.mrna1;Target=FBgn0032774.1 20 79 +
ChrX	stalkie_big_nohaplotig	CDS	52879507	52879683	.	-	0	Parent=FBgn0032774.1.mrna1;Target=FBgn0032774.1 475 651 +
ChrX	stalkie_big_nohaplotig	CDS	52879771	52879948	.	-	1	Parent=FBgn0032774.1.mrna1;Target=FBgn0032774.1 297 474 +
ChrX	stalkie_big_nohaplotig	CDS	52880362	52880578	.	-	2	Parent=FBgn0032774.1.mrna1;Target=FBgn0032774.1 80 296 +
ChrX	stalkie_big_nohaplotig	CDS	52880733	52880790	.	-	0	Parent=FBgn0032774.1.mrna1;Target=FBgn0032774.1 22 79 +
ChrX	gffcl	locus	52880891	52881332	.	-	.	ID=RLOC_00003067;geneIDs=comp139717_c0_seq1.path1;transcripts=comp139717_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52880891	52881332	.	-	.	ID=comp139717_c0_seq1.mrna1;geneID=comp139717_c0_seq1.path1;Name=comp139717_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.3;matches=439;mismatches=3;indels=0;unknowns=0;Target=comp139717_c0_seq1 444 3 .;CDS_Target=comp139717_c0_seq1 96 4 .;locus=RLOC_00003067
ChrX	stalkie_big_nohaplotig	exon	52880891	52881332	99	-	.	Parent=comp139717_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	52881239	52881331	.	-	0	Parent=comp139717_c0_seq1.mrna1
ChrX	gffcl	locus	52881548	52882536	.	+	.	ID=RLOC_00003068;geneIDs=comp150915_c0_seq1.path1;transcripts=comp150915_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52881548	52882536	.	+	.	ID=comp150915_c0_seq1.mrna1;geneID=comp150915_c0_seq1.path1;Name=comp150915_c0_seq1;Dir=indeterminatecoverage=98.3;identity=93.8;matches=949;mismatches=33;indels=30;unknowns=0;Target=comp150915_c0_seq1 1022 18 .;CDS_Target=comp150915_c0_seq1 1022 942 .;locus=RLOC_00003068
ChrX	stalkie_big_nohaplotig	exon	52881548	52882536	93	+	.	Parent=comp150915_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	52882456	52882536	.	+	0	Parent=comp150915_c0_seq1.mrna1
ChrX	gffcl	locus	52885287	52885994	.	+	.	ID=RLOC_00003069;geneIDs=comp139395_c0_seq1.path1;transcripts=comp139395_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52885287	52885994	.	+	.	ID=comp139395_c0_seq1.mrna1;geneID=comp139395_c0_seq1.path1;Name=comp139395_c0_seq1;Dir=indeterminatecoverage=97.7;identity=99.3;matches=703;mismatches=5;indels=0;unknowns=0;Target=comp139395_c0_seq1 725 18 .;CDS_Target=comp139395_c0_seq1 686 567 .;locus=RLOC_00003069
ChrX	stalkie_big_nohaplotig	exon	52885287	52885994	99	+	.	Parent=comp139395_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	52885836	52885955	.	+	0	Parent=comp139395_c0_seq1.mrna1
ChrX	gffcl	locus	52887546	52888321	.	+	.	ID=RLOC_00003070;geneIDs=comp143722_c0_seq1.path1;transcripts=comp143722_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52887546	52888321	.	+	.	ID=comp143722_c0_seq1.mrna1;geneID=comp143722_c0_seq1.path1;Name=comp143722_c0_seq1;Dir=indeterminatecoverage=98.1;identity=97.3;matches=762;mismatches=14;indels=7;unknowns=0;Target=comp143722_c0_seq1 784 2 .;CDS_Target=comp143722_c0_seq1 233 3 .;locus=RLOC_00003070
ChrX	stalkie_big_nohaplotig	exon	52887546	52888321	97	+	.	Parent=comp143722_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	52887547	52887777	.	+	0	Parent=comp143722_c0_seq1.mrna1
ChrX	gffcl	locus	52889790	52890169	.	+	.	ID=RLOC_00003071;geneIDs=comp144205_c0_seq1.path1;transcripts=comp144205_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52889790	52890169	.	+	.	ID=comp144205_c0_seq1.mrna1;geneID=comp144205_c0_seq1.path1;Name=comp144205_c0_seq1;Dir=sensecoverage=72.0;identity=93.4;matches=296;mismatches=19;indels=2;unknowns=0;locus=RLOC_00003071
ChrX	stalkie_big_nohaplotig	exon	52889790	52889959	97	+	.	Parent=comp144205_c0_seq1.mrna1;Target=comp144205_c0_seq1 124 292 +
ChrX	stalkie_big_nohaplotig	exon	52890024	52890169	89	+	.	Parent=comp144205_c0_seq1.mrna1;Target=comp144205_c0_seq1 293 439 +
ChrX	stalkie_big_nohaplotig	CDS	52889791	52889959	.	+	0	Parent=comp144205_c0_seq1.mrna1;Target=comp144205_c0_seq1 125 292 +
ChrX	stalkie_big_nohaplotig	CDS	52890024	52890089	.	+	2	Parent=comp144205_c0_seq1.mrna1;Target=comp144205_c0_seq1 293 358 +
ChrX	gffcl	locus	52894499	52895068	.	+	.	ID=RLOC_00003072;geneIDs=comp141980_c0_seq1.path1;transcripts=comp141980_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52894499	52895068	.	+	.	ID=comp141980_c0_seq1.mrna1;geneID=comp141980_c0_seq1.path1;Name=comp141980_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=569;mismatches=1;indels=2;unknowns=0;Target=comp141980_c0_seq1 572 1 .;CDS_Target=comp141980_c0_seq1 55 2 .;locus=RLOC_00003072
ChrX	stalkie_big_nohaplotig	exon	52894499	52895068	99	+	.	Parent=comp141980_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	52894500	52894551	.	+	0	Parent=comp141980_c0_seq1.mrna1
ChrX	gffcl	locus	52895139	52895454	.	+	.	ID=RLOC_00003073;geneIDs=comp111147_c0_seq1.path1;transcripts=comp111147_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52895139	52895454	.	+	.	ID=comp111147_c0_seq1.mrna1;geneID=comp111147_c0_seq1.path1;Name=comp111147_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=314;mismatches=2;indels=0;unknowns=0;Target=comp111147_c0_seq1 316 1 .;CDS_Target=comp111147_c0_seq1 46 2 .;locus=RLOC_00003073
ChrX	stalkie_big_nohaplotig	exon	52895139	52895454	99	+	.	Parent=comp111147_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	52895140	52895184	.	+	0	Parent=comp111147_c0_seq1.mrna1
ChrX	gffcl	locus	52901509	52901885	.	-	.	ID=RLOC_00003074;geneIDs=comp1716596_c0_seq1.path1;transcripts=comp1716596_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52901509	52901885	.	-	.	ID=comp1716596_c0_seq1.mrna1;geneID=comp1716596_c0_seq1.path1;Name=comp1716596_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.6;matches=353;mismatches=19;indels=5;unknowns=0;Target=comp1716596_c0_seq1 372 1 .;CDS_Target=comp1716596_c0_seq1 168 61 .;locus=RLOC_00003074
ChrX	stalkie_big_nohaplotig	exon	52901509	52901885	93	-	.	Parent=comp1716596_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	52901718	52901825	.	-	0	Parent=comp1716596_c0_seq1.mrna1
ChrX	gffcl	locus	52911481	52916315	.	-	.	ID=RLOC_00003075;geneIDs=FBgn0032775.1.path1;transcripts=FBgn0032775.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52911481	52916315	.	-	.	ID=FBgn0032775.1.mrna1;geneID=FBgn0032775.1.path1;Name=FBgn0032775.1;Dir=sensecoverage=100.0;identity=99.7;matches=2066;mismatches=7;indels=0;unknowns=0;locus=RLOC_00003075
ChrX	stalkie_big_nohaplotig	exon	52911481	52912028	99	-	.	Parent=FBgn0032775.1.mrna1;Target=FBgn0032775.1 1526 2073 +
ChrX	stalkie_big_nohaplotig	exon	52912095	52912431	99	-	.	Parent=FBgn0032775.1.mrna1;Target=FBgn0032775.1 1189 1525 +
ChrX	stalkie_big_nohaplotig	exon	52914999	52915124	100	-	.	Parent=FBgn0032775.1.mrna1;Target=FBgn0032775.1 1063 1188 +
ChrX	stalkie_big_nohaplotig	exon	52915186	52916109	99	-	.	Parent=FBgn0032775.1.mrna1;Target=FBgn0032775.1 139 1062 +
ChrX	stalkie_big_nohaplotig	exon	52916178	52916315	100	-	.	Parent=FBgn0032775.1.mrna1;Target=FBgn0032775.1 1 138 +
ChrX	stalkie_big_nohaplotig	CDS	52911481	52912028	.	-	2	Parent=FBgn0032775.1.mrna1;Target=FBgn0032775.1 1526 2073 +
ChrX	stalkie_big_nohaplotig	CDS	52912095	52912431	.	-	0	Parent=FBgn0032775.1.mrna1;Target=FBgn0032775.1 1189 1525 +
ChrX	stalkie_big_nohaplotig	CDS	52914999	52915124	.	-	0	Parent=FBgn0032775.1.mrna1;Target=FBgn0032775.1 1063 1188 +
ChrX	stalkie_big_nohaplotig	CDS	52915186	52916109	.	-	0	Parent=FBgn0032775.1.mrna1;Target=FBgn0032775.1 139 1062 +
ChrX	stalkie_big_nohaplotig	CDS	52916178	52916315	.	-	0	Parent=FBgn0032775.1.mrna1;Target=FBgn0032775.1 1 138 +
ChrX	gffcl	locus	52941856	52942169	.	-	.	ID=RLOC_00003076;geneIDs=comp134760_c1_seq1.path2;transcripts=comp134760_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	52941856	52942169	.	-	.	ID=comp134760_c1_seq1.mrna2;geneID=comp134760_c1_seq1.path2;Name=comp134760_c1_seq1;Dir=indeterminatecoverage=62.4;identity=100.0;matches=314;mismatches=0;indels=0;unknowns=0;Target=comp134760_c1_seq1 498 185 .;locus=RLOC_00003076
ChrX	stalkie_big_nohaplotig	exon	52941856	52942169	100	-	.	Parent=comp134760_c1_seq1.mrna2
ChrX	gffcl	locus	52957661	52959240	.	-	.	ID=RLOC_00003077;geneIDs=ORF637.path1;transcripts=ORF637.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52957661	52959240	.	-	.	ID=ORF637.mrna1;geneID=ORF637.path1;Name=ORF637;Dir=indeterminatecoverage=99.9;identity=99.1;matches=1566;mismatches=14;indels=0;unknowns=0;Target=ORF637 1581 2 .;CDS_Target=ORF637 1581 4 .;locus=RLOC_00003077
ChrX	stalkie_big_nohaplotig	exon	52957661	52959240	99	-	.	Parent=ORF637.mrna1
ChrX	stalkie_big_nohaplotig	CDS	52957661	52959238	.	-	0	Parent=ORF637.mrna1
ChrX	gffcl	locus	52964024	52965603	.	+	.	ID=RLOC_00003078;geneIDs=ORF637.path2;transcripts=ORF637.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	52964024	52965603	.	+	.	ID=ORF637.mrna2;geneID=ORF637.path2;Name=ORF637;Dir=indeterminatecoverage=99.9;identity=99.1;matches=1566;mismatches=14;indels=0;unknowns=0;Target=ORF637 1581 2 .;CDS_Target=ORF637 1581 4 .;locus=RLOC_00003078
ChrX	stalkie_big_nohaplotig	exon	52964024	52965603	99	+	.	Parent=ORF637.mrna2
ChrX	stalkie_big_nohaplotig	CDS	52964026	52965603	.	+	0	Parent=ORF637.mrna2
ChrX	gffcl	locus	52977325	52979838	.	-	.	ID=RLOC_00003079;geneIDs=FBgn0032955.1.path1;transcripts=FBgn0032955.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52977325	52979838	.	-	.	ID=FBgn0032955.1.mrna1;geneID=FBgn0032955.1.path1;Name=FBgn0032955.1;Dir=sensecoverage=59.0;identity=100.0;matches=915;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003079
ChrX	stalkie_big_nohaplotig	exon	52977325	52977402	100	-	.	Parent=FBgn0032955.1.mrna1;Target=FBgn0032955.1 1474 1551 +
ChrX	stalkie_big_nohaplotig	exon	52977470	52977860	100	-	.	Parent=FBgn0032955.1.mrna1;Target=FBgn0032955.1 1083 1473 +
ChrX	stalkie_big_nohaplotig	exon	52979238	52979309	100	-	.	Parent=FBgn0032955.1.mrna1;Target=FBgn0032955.1 1011 1082 +
ChrX	stalkie_big_nohaplotig	exon	52979379	52979576	100	-	.	Parent=FBgn0032955.1.mrna1;Target=FBgn0032955.1 813 1010 +
ChrX	stalkie_big_nohaplotig	exon	52979663	52979838	100	-	.	Parent=FBgn0032955.1.mrna1;Target=FBgn0032955.1 637 812 +
ChrX	stalkie_big_nohaplotig	CDS	52977325	52977402	.	-	0	Parent=FBgn0032955.1.mrna1;Target=FBgn0032955.1 1474 1551 +
ChrX	stalkie_big_nohaplotig	CDS	52977470	52977860	.	-	1	Parent=FBgn0032955.1.mrna1;Target=FBgn0032955.1 1083 1473 +
ChrX	stalkie_big_nohaplotig	CDS	52979238	52979309	.	-	1	Parent=FBgn0032955.1.mrna1;Target=FBgn0032955.1 1011 1082 +
ChrX	stalkie_big_nohaplotig	CDS	52979379	52979576	.	-	1	Parent=FBgn0032955.1.mrna1;Target=FBgn0032955.1 813 1010 +
ChrX	stalkie_big_nohaplotig	CDS	52979663	52979838	.	-	0	Parent=FBgn0032955.1.mrna1;Target=FBgn0032955.1 637 812 +
ChrX	gffcl	locus	52978346	52979071	.	+	.	ID=RLOC_00003080;geneIDs=comp156669_c0_seq1.path1;transcripts=comp156669_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52978346	52979071	.	+	.	ID=comp156669_c0_seq1.mrna1;geneID=comp156669_c0_seq1.path1;Name=comp156669_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=718;mismatches=8;indels=0;unknowns=0;Target=comp156669_c0_seq1 726 1 .;CDS_Target=comp156669_c0_seq1 535 398 .;locus=RLOC_00003080
ChrX	stalkie_big_nohaplotig	exon	52978346	52979071	98	+	.	Parent=comp156669_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	52978743	52978880	.	+	0	Parent=comp156669_c0_seq1.mrna1
ChrX	gffcl	locus	52998705	53010392	.	+	.	ID=RLOC_00003081;geneIDs=comp157718_c0_seq1.path1;transcripts=comp157718_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	52998705	53010392	.	+	.	ID=comp157718_c0_seq1.mrna1;geneID=comp157718_c0_seq1.path1;Name=comp157718_c0_seq1;Dir=sensecoverage=99.9;identity=99.3;matches=764;mismatches=4;indels=1;unknowns=0;locus=RLOC_00003081
ChrX	stalkie_big_nohaplotig	exon	52998705	52998873	100	+	.	Parent=comp157718_c0_seq1.mrna1;Target=comp157718_c0_seq1 1 169 +
ChrX	stalkie_big_nohaplotig	exon	52999223	52999282	100	+	.	Parent=comp157718_c0_seq1.mrna1;Target=comp157718_c0_seq1 170 229 +
ChrX	stalkie_big_nohaplotig	exon	53006796	53007096	98	+	.	Parent=comp157718_c0_seq1.mrna1;Target=comp157718_c0_seq1 230 530 +
ChrX	stalkie_big_nohaplotig	exon	53010154	53010392	99	+	.	Parent=comp157718_c0_seq1.mrna1;Target=comp157718_c0_seq1 531 768 +
ChrX	stalkie_big_nohaplotig	CDS	53007022	53007096	.	+	0	Parent=comp157718_c0_seq1.mrna1;Target=comp157718_c0_seq1 456 530 +
ChrX	stalkie_big_nohaplotig	CDS	53010154	53010262	.	+	0	Parent=comp157718_c0_seq1.mrna1;Target=comp157718_c0_seq1 531 638 +
ChrX	gffcl	locus	53014791	53015312	.	-	.	ID=RLOC_00003082;geneIDs=comp136644_c0_seq1.path1;transcripts=comp136644_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53014791	53015312	.	-	.	ID=comp136644_c0_seq1.mrna1;geneID=comp136644_c0_seq1.path1;Name=comp136644_c0_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=434;mismatches=2;indels=1;unknowns=0;locus=RLOC_00003082
ChrX	stalkie_big_nohaplotig	exon	53014791	53015203	99	-	.	Parent=comp136644_c0_seq1.mrna1;Target=comp136644_c0_seq1 1 414 -
ChrX	stalkie_big_nohaplotig	exon	53015290	53015312	100	-	.	Parent=comp136644_c0_seq1.mrna1;Target=comp136644_c0_seq1 415 437 -
ChrX	stalkie_big_nohaplotig	CDS	53015144	53015203	.	-	1	Parent=comp136644_c0_seq1.mrna1;Target=comp136644_c0_seq1 354 414 .
ChrX	stalkie_big_nohaplotig	CDS	53015290	53015312	.	-	0	Parent=comp136644_c0_seq1.mrna1;Target=comp136644_c0_seq1 415 437 .
ChrX	gffcl	locus	53024693	53030571	.	-	.	ID=RLOC_00003083;geneIDs=comp148571_c0_seq1.path1;transcripts=comp148571_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53024693	53030571	.	-	.	ID=comp148571_c0_seq1.mrna1;geneID=comp148571_c0_seq1.path1;Name=comp148571_c0_seq1;Dir=sensecoverage=77.7;identity=98.9;matches=904;mismatches=10;indels=0;unknowns=0;Target=comp148571_c0_seq1 204 386 +;locus=RLOC_00003083
ChrX	stalkie_big_nohaplotig	exon	53024693	53025583	99	-	.	Parent=comp148571_c0_seq1.mrna1;Target=comp148571_c0_seq1 24 914 +
ChrX	stalkie_big_nohaplotig	exon	53030549	53030571	86	-	.	Parent=comp148571_c0_seq1.mrna1;Target=comp148571_c0_seq1 1 23 +
ChrX	stalkie_big_nohaplotig	CDS	53025221	53025403	.	-	0	Parent=comp148571_c0_seq1.mrna1
ChrX	gffcl	locus	53069321	53079282	.	+	.	ID=RLOC_00003084;geneIDs=FBgn0023416.1.path1;transcripts=FBgn0023416.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53069321	53079282	.	+	.	ID=FBgn0023416.1.mrna1;geneID=FBgn0023416.1.path1;Name=FBgn0023416.1;Dir=sensecoverage=100.0;identity=99.8;matches=2907;mismatches=5;indels=1;unknowns=0;Target=FBgn0023416.1 3 77 +;locus=RLOC_00003084
ChrX	stalkie_big_nohaplotig	exon	53069321	53069421	98	+	.	Parent=FBgn0023416.1.mrna1;Target=FBgn0023416.1 1 102 +
ChrX	stalkie_big_nohaplotig	exon	53069484	53069752	100	+	.	Parent=FBgn0023416.1.mrna1;Target=FBgn0023416.1 103 371 +
ChrX	stalkie_big_nohaplotig	exon	53070728	53070839	100	+	.	Parent=FBgn0023416.1.mrna1;Target=FBgn0023416.1 372 483 +
ChrX	stalkie_big_nohaplotig	exon	53070919	53071046	100	+	.	Parent=FBgn0023416.1.mrna1;Target=FBgn0023416.1 484 611 +
ChrX	stalkie_big_nohaplotig	exon	53071156	53071314	99	+	.	Parent=FBgn0023416.1.mrna1;Target=FBgn0023416.1 612 770 +
ChrX	stalkie_big_nohaplotig	exon	53072391	53072529	99	+	.	Parent=FBgn0023416.1.mrna1;Target=FBgn0023416.1 771 909 +
ChrX	stalkie_big_nohaplotig	exon	53072826	53073028	100	+	.	Parent=FBgn0023416.1.mrna1;Target=FBgn0023416.1 910 1112 +
ChrX	stalkie_big_nohaplotig	exon	53073116	53073274	100	+	.	Parent=FBgn0023416.1.mrna1;Target=FBgn0023416.1 1113 1271 +
ChrX	stalkie_big_nohaplotig	exon	53073337	53073541	99	+	.	Parent=FBgn0023416.1.mrna1;Target=FBgn0023416.1 1272 1476 +
ChrX	stalkie_big_nohaplotig	exon	53073630	53073873	100	+	.	Parent=FBgn0023416.1.mrna1;Target=FBgn0023416.1 1477 1720 +
ChrX	stalkie_big_nohaplotig	exon	53073932	53074004	100	+	.	Parent=FBgn0023416.1.mrna1;Target=FBgn0023416.1 1721 1793 +
ChrX	stalkie_big_nohaplotig	exon	53075310	53075385	98	+	.	Parent=FBgn0023416.1.mrna1;Target=FBgn0023416.1 1794 1869 +
ChrX	stalkie_big_nohaplotig	exon	53076221	53076446	100	+	.	Parent=FBgn0023416.1.mrna1;Target=FBgn0023416.1 1870 2095 +
ChrX	stalkie_big_nohaplotig	exon	53076525	53076607	100	+	.	Parent=FBgn0023416.1.mrna1;Target=FBgn0023416.1 2096 2178 +
ChrX	stalkie_big_nohaplotig	exon	53076669	53077016	100	+	.	Parent=FBgn0023416.1.mrna1;Target=FBgn0023416.1 2179 2526 +
ChrX	stalkie_big_nohaplotig	exon	53078821	53078928	100	+	.	Parent=FBgn0023416.1.mrna1;Target=FBgn0023416.1 2527 2634 +
ChrX	stalkie_big_nohaplotig	exon	53079004	53079282	100	+	.	Parent=FBgn0023416.1.mrna1;Target=FBgn0023416.1 2635 2913 +
ChrX	stalkie_big_nohaplotig	CDS	53069323	53069396	.	+	0	Parent=FBgn0023416.1.mrna1
ChrX	gffcl	locus	53083890	53084989	.	-	.	ID=RLOC_00003085;geneIDs=comp153632_c0_seq1.path1;transcripts=comp153632_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53083890	53084989	.	-	.	ID=comp153632_c0_seq1.mrna1;geneID=comp153632_c0_seq1.path1;Name=comp153632_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.8;matches=1098;mismatches=2;indels=0;unknowns=0;Target=comp153632_c0_seq1 1100 1 .;CDS_Target=comp153632_c0_seq1 752 660 .;locus=RLOC_00003085
ChrX	stalkie_big_nohaplotig	exon	53083890	53084989	99	-	.	Parent=comp153632_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53084238	53084330	.	-	0	Parent=comp153632_c0_seq1.mrna1
ChrX	gffcl	locus	53085107	53085504	.	-	.	ID=RLOC_00003086;geneIDs=comp149548_c0_seq1.path1;transcripts=comp149548_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53085107	53085504	.	-	.	ID=comp149548_c0_seq1.mrna1;geneID=comp149548_c0_seq1.path1;Name=comp149548_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=398;mismatches=0;indels=0;unknowns=0;Target=comp149548_c0_seq1 398 1 .;CDS_Target=comp149548_c0_seq1 387 241 .;locus=RLOC_00003086
ChrX	stalkie_big_nohaplotig	exon	53085107	53085504	100	-	.	Parent=comp149548_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53085118	53085264	.	-	0	Parent=comp149548_c0_seq1.mrna1
ChrX	gffcl	locus	53085696	53086293	.	-	.	ID=RLOC_00003087;geneIDs=comp147052_c0_seq1.path1;transcripts=comp147052_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53085696	53086293	.	-	.	ID=comp147052_c0_seq1.mrna1;geneID=comp147052_c0_seq1.path1;Name=comp147052_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=593;mismatches=5;indels=1;unknowns=0;Target=comp147052_c0_seq1 599 1 .;CDS_Target=comp147052_c0_seq1 527 450 .;locus=RLOC_00003087
ChrX	stalkie_big_nohaplotig	exon	53085696	53086293	98	-	.	Parent=comp147052_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53085768	53085845	.	-	0	Parent=comp147052_c0_seq1.mrna1
ChrX	gffcl	locus	53087398	53088696	.	-	.	ID=RLOC_00003088;geneIDs=comp150480_c0_seq1.path1,comp158011_c1_seq1.path1;transcripts=comp158011_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53087398	53088498	.	-	.	ID=comp158011_c1_seq1.mrna1;geneID=comp158011_c1_seq1.path1;Name=comp158011_c1_seq1;Dir=indeterminatecoverage=100.0;identity=91.2;matches=1015;mismatches=34;indels=64;unknowns=0;Target=comp158011_c1_seq1 1017 916 .;locus=RLOC_00003088
ChrX	stalkie_big_nohaplotig	exon	53087398	53088408	90	-	.	Parent=comp158011_c1_seq1.mrna1;Target=comp158011_c1_seq1 1492 496 .
ChrX	stalkie_big_nohaplotig	exon	53088422	53088498	98	-	.	Parent=comp158011_c1_seq1.mrna1;Target=comp158011_c1_seq1 77 1 .
ChrX	stalkie_big_nohaplotig	CDS	53087848	53087949	.	-	0	Parent=comp158011_c1_seq1.mrna1
ChrX	gffcl	locus	53089934	53090297	.	-	.	ID=RLOC_00003089;geneIDs=comp142014_c0_seq1.path1;transcripts=comp142014_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53089934	53090297	.	-	.	ID=comp142014_c0_seq1.mrna1;geneID=comp142014_c0_seq1.path1;Name=comp142014_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.7;matches=363;mismatches=1;indels=0;unknowns=0;Target=comp142014_c0_seq1 364 1 .;CDS_Target=comp142014_c0_seq1 272 228 .;locus=RLOC_00003089
ChrX	stalkie_big_nohaplotig	exon	53089934	53090297	99	-	.	Parent=comp142014_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53090026	53090070	.	-	0	Parent=comp142014_c0_seq1.mrna1
ChrX	gffcl	locus	53096791	53120952	.	+	.	ID=RLOC_00003090;geneIDs=FBgn0032956.1.path1;transcripts=FBgn0032956.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53096791	53120952	.	+	.	ID=FBgn0032956.1.mrna1;geneID=FBgn0032956.1.path1;Name=FBgn0032956.1;Dir=sensecoverage=100.0;identity=99.8;matches=2309;mismatches=4;indels=0;unknowns=0;locus=RLOC_00003090
ChrX	stalkie_big_nohaplotig	exon	53096791	53096951	99	+	.	Parent=FBgn0032956.1.mrna1;Target=FBgn0032956.1 1 161 +
ChrX	stalkie_big_nohaplotig	exon	53097042	53097275	99	+	.	Parent=FBgn0032956.1.mrna1;Target=FBgn0032956.1 162 395 +
ChrX	stalkie_big_nohaplotig	exon	53097368	53097474	100	+	.	Parent=FBgn0032956.1.mrna1;Target=FBgn0032956.1 396 502 +
ChrX	stalkie_big_nohaplotig	exon	53099764	53100118	100	+	.	Parent=FBgn0032956.1.mrna1;Target=FBgn0032956.1 503 857 +
ChrX	stalkie_big_nohaplotig	exon	53100189	53100743	100	+	.	Parent=FBgn0032956.1.mrna1;Target=FBgn0032956.1 858 1412 +
ChrX	stalkie_big_nohaplotig	exon	53111746	53111806	100	+	.	Parent=FBgn0032956.1.mrna1;Target=FBgn0032956.1 1413 1473 +
ChrX	stalkie_big_nohaplotig	exon	53112826	53112943	100	+	.	Parent=FBgn0032956.1.mrna1;Target=FBgn0032956.1 1474 1591 +
ChrX	stalkie_big_nohaplotig	exon	53113013	53113122	100	+	.	Parent=FBgn0032956.1.mrna1;Target=FBgn0032956.1 1592 1701 +
ChrX	stalkie_big_nohaplotig	exon	53113193	53113561	99	+	.	Parent=FBgn0032956.1.mrna1;Target=FBgn0032956.1 1702 2070 +
ChrX	stalkie_big_nohaplotig	exon	53114108	53114221	99	+	.	Parent=FBgn0032956.1.mrna1;Target=FBgn0032956.1 2071 2184 +
ChrX	stalkie_big_nohaplotig	exon	53120824	53120952	100	+	.	Parent=FBgn0032956.1.mrna1;Target=FBgn0032956.1 2185 2313 +
ChrX	stalkie_big_nohaplotig	CDS	53096791	53096951	.	+	0	Parent=FBgn0032956.1.mrna1;Target=FBgn0032956.1 1 161 +
ChrX	stalkie_big_nohaplotig	CDS	53097042	53097275	.	+	1	Parent=FBgn0032956.1.mrna1;Target=FBgn0032956.1 162 395 +
ChrX	stalkie_big_nohaplotig	CDS	53097368	53097474	.	+	1	Parent=FBgn0032956.1.mrna1;Target=FBgn0032956.1 396 502 +
ChrX	stalkie_big_nohaplotig	CDS	53099764	53100118	.	+	2	Parent=FBgn0032956.1.mrna1;Target=FBgn0032956.1 503 857 +
ChrX	stalkie_big_nohaplotig	CDS	53100189	53100743	.	+	1	Parent=FBgn0032956.1.mrna1;Target=FBgn0032956.1 858 1412 +
ChrX	stalkie_big_nohaplotig	CDS	53111746	53111806	.	+	1	Parent=FBgn0032956.1.mrna1;Target=FBgn0032956.1 1413 1473 +
ChrX	stalkie_big_nohaplotig	CDS	53112826	53112943	.	+	0	Parent=FBgn0032956.1.mrna1;Target=FBgn0032956.1 1474 1591 +
ChrX	stalkie_big_nohaplotig	CDS	53113013	53113122	.	+	2	Parent=FBgn0032956.1.mrna1;Target=FBgn0032956.1 1592 1701 +
ChrX	stalkie_big_nohaplotig	CDS	53113193	53113561	.	+	0	Parent=FBgn0032956.1.mrna1;Target=FBgn0032956.1 1702 2070 +
ChrX	stalkie_big_nohaplotig	CDS	53114108	53114221	.	+	0	Parent=FBgn0032956.1.mrna1;Target=FBgn0032956.1 2071 2184 +
ChrX	stalkie_big_nohaplotig	CDS	53120824	53120952	.	+	0	Parent=FBgn0032956.1.mrna1;Target=FBgn0032956.1 2185 2313 +
ChrX	gffcl	locus	53121461	53122331	.	-	.	ID=RLOC_00003091;geneIDs=comp149898_c1_seq1.path1;transcripts=comp149898_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53121461	53122331	.	-	.	ID=comp149898_c1_seq1.mrna1;geneID=comp149898_c1_seq1.path1;Name=comp149898_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=871;mismatches=0;indels=0;unknowns=0;Target=comp149898_c1_seq1 871 1 .;CDS_Target=comp149898_c1_seq1 92 3 .;locus=RLOC_00003091
ChrX	stalkie_big_nohaplotig	exon	53121461	53122331	100	-	.	Parent=comp149898_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53122240	53122329	.	-	0	Parent=comp149898_c1_seq1.mrna1
ChrX	gffcl	locus	53123940	53125337	.	-	.	ID=RLOC_00003092;geneIDs=comp160040_c0_seq1.path1;transcripts=comp160040_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53123940	53125337	.	-	.	ID=comp160040_c0_seq1.mrna1;geneID=comp160040_c0_seq1.path1;Name=comp160040_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.0;matches=1363;mismatches=35;indels=22;unknowns=0;Target=comp160040_c0_seq1 1422 3 .;CDS_Target=comp160040_c0_seq1 883 785 .;locus=RLOC_00003092
ChrX	stalkie_big_nohaplotig	exon	53123940	53125337	95	-	.	Parent=comp160040_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53124457	53124555	.	-	0	Parent=comp160040_c0_seq1.mrna1
ChrX	gffcl	locus	53129209	53129785	.	+	.	ID=RLOC_00003093;geneIDs=comp146313_c0_seq1.path1;transcripts=comp146313_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53129209	53129785	.	+	.	ID=comp146313_c0_seq1.mrna1;geneID=comp146313_c0_seq1.path1;Name=comp146313_c0_seq1;Dir=indeterminatecoverage=88.0;identity=99.8;matches=576;mismatches=1;indels=0;unknowns=0;Target=comp146313_c0_seq1 579 3 .;CDS_Target=comp146313_c0_seq1 408 175 .;locus=RLOC_00003093
ChrX	stalkie_big_nohaplotig	exon	53129209	53129785	99	+	.	Parent=comp146313_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53129381	53129614	.	+	0	Parent=comp146313_c0_seq1.mrna1
ChrX	gffcl	locus	53155845	53156402	.	-	.	ID=RLOC_00003095;geneIDs=comp51421_c0_seq1.path1;transcripts=comp51421_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53155845	53156402	.	-	.	ID=comp51421_c0_seq1.mrna1;geneID=comp51421_c0_seq1.path1;Name=comp51421_c0_seq1;Dir=indeterminatecoverage=99.5;identity=100.0;matches=558;mismatches=0;indels=0;unknowns=0;Target=comp51421_c0_seq1 561 4 .;CDS_Target=comp51421_c0_seq1 83 6 .;locus=RLOC_00003095
ChrX	stalkie_big_nohaplotig	exon	53155845	53156402	100	-	.	Parent=comp51421_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53156323	53156400	.	-	0	Parent=comp51421_c0_seq1.mrna1
ChrX	gffcl	locus	53157296	53157907	.	-	.	ID=RLOC_00003096;geneIDs=comp143797_c0_seq1.path1;transcripts=comp143797_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53157296	53157907	.	-	.	ID=comp143797_c0_seq1.mrna1;geneID=comp143797_c0_seq1.path1;Name=comp143797_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.8;matches=612;mismatches=0;indels=1;unknowns=0;Target=comp143797_c0_seq1 618 6 .;CDS_Target=comp143797_c0_seq1 472 413 .;locus=RLOC_00003096
ChrX	stalkie_big_nohaplotig	exon	53157296	53157907	99	-	.	Parent=comp143797_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53157442	53157501	.	-	0	Parent=comp143797_c0_seq1.mrna1
ChrX	gffcl	locus	53164648	53173697	.	-	.	ID=RLOC_00003097;geneIDs=FBgn0046704.1.path1;transcripts=FBgn0046704.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53164648	53173697	.	-	.	ID=FBgn0046704.1.mrna1;geneID=FBgn0046704.1.path1;Name=FBgn0046704.1;Dir=sensecoverage=100.0;identity=99.8;matches=3527;mismatches=7;indels=0;unknowns=0;locus=RLOC_00003097
ChrX	stalkie_big_nohaplotig	exon	53164648	53164734	100	-	.	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 3448 3534 +
ChrX	stalkie_big_nohaplotig	exon	53166824	53166940	100	-	.	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 3331 3447 +
ChrX	stalkie_big_nohaplotig	exon	53167011	53167330	100	-	.	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 3011 3330 +
ChrX	stalkie_big_nohaplotig	exon	53167395	53167502	100	-	.	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 2903 3010 +
ChrX	stalkie_big_nohaplotig	exon	53167569	53167771	100	-	.	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 2700 2902 +
ChrX	stalkie_big_nohaplotig	exon	53167849	53168247	99	-	.	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 2301 2699 +
ChrX	stalkie_big_nohaplotig	exon	53168396	53168440	100	-	.	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 2256 2300 +
ChrX	stalkie_big_nohaplotig	exon	53168503	53168669	99	-	.	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 2089 2255 +
ChrX	stalkie_big_nohaplotig	exon	53169286	53169469	100	-	.	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 1905 2088 +
ChrX	stalkie_big_nohaplotig	exon	53169536	53170257	99	-	.	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 1183 1904 +
ChrX	stalkie_big_nohaplotig	exon	53170589	53170729	100	-	.	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 1042 1182 +
ChrX	stalkie_big_nohaplotig	exon	53170824	53170943	100	-	.	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 922 1041 +
ChrX	stalkie_big_nohaplotig	exon	53171013	53171180	99	-	.	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 754 921 +
ChrX	stalkie_big_nohaplotig	exon	53171675	53171758	98	-	.	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 670 753 +
ChrX	stalkie_big_nohaplotig	exon	53171831	53171902	100	-	.	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 598 669 +
ChrX	stalkie_big_nohaplotig	exon	53171967	53172206	99	-	.	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 358 597 +
ChrX	stalkie_big_nohaplotig	exon	53172280	53172381	100	-	.	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 256 357 +
ChrX	stalkie_big_nohaplotig	exon	53173443	53173697	100	-	.	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 1 255 +
ChrX	stalkie_big_nohaplotig	CDS	53164648	53164734	.	-	0	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 3448 3534 +
ChrX	stalkie_big_nohaplotig	CDS	53166824	53166940	.	-	0	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 3331 3447 +
ChrX	stalkie_big_nohaplotig	CDS	53167011	53167330	.	-	2	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 3011 3330 +
ChrX	stalkie_big_nohaplotig	CDS	53167395	53167502	.	-	2	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 2903 3010 +
ChrX	stalkie_big_nohaplotig	CDS	53167569	53167771	.	-	1	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 2700 2902 +
ChrX	stalkie_big_nohaplotig	CDS	53167849	53168247	.	-	1	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 2301 2699 +
ChrX	stalkie_big_nohaplotig	CDS	53168396	53168440	.	-	1	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 2256 2300 +
ChrX	stalkie_big_nohaplotig	CDS	53168503	53168669	.	-	0	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 2089 2255 +
ChrX	stalkie_big_nohaplotig	CDS	53169286	53169469	.	-	1	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 1905 2088 +
ChrX	stalkie_big_nohaplotig	CDS	53169536	53170257	.	-	0	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 1183 1904 +
ChrX	stalkie_big_nohaplotig	CDS	53170589	53170729	.	-	0	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 1042 1182 +
ChrX	stalkie_big_nohaplotig	CDS	53170824	53170943	.	-	0	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 922 1041 +
ChrX	stalkie_big_nohaplotig	CDS	53171013	53171180	.	-	0	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 754 921 +
ChrX	stalkie_big_nohaplotig	CDS	53171675	53171758	.	-	0	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 670 753 +
ChrX	stalkie_big_nohaplotig	CDS	53171831	53171902	.	-	0	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 598 669 +
ChrX	stalkie_big_nohaplotig	CDS	53171967	53172206	.	-	0	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 358 597 +
ChrX	stalkie_big_nohaplotig	CDS	53172280	53172381	.	-	0	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 256 357 +
ChrX	stalkie_big_nohaplotig	CDS	53173443	53173697	.	-	0	Parent=FBgn0046704.1.mrna1;Target=FBgn0046704.1 1 255 +
ChrX	gffcl	locus	53185093	53187966	.	+	.	ID=RLOC_00003098;geneIDs=FBgn0025777.1.path1;transcripts=FBgn0025777.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53185093	53187966	.	+	.	ID=FBgn0025777.1.mrna1;geneID=FBgn0025777.1.path1;Name=FBgn0025777.1;Dir=sensecoverage=99.1;identity=99.7;matches=1160;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003098
ChrX	stalkie_big_nohaplotig	exon	53185093	53185382	100	+	.	Parent=FBgn0025777.1.mrna1;Target=FBgn0025777.1 11 300 +
ChrX	stalkie_big_nohaplotig	exon	53185445	53185505	96	+	.	Parent=FBgn0025777.1.mrna1;Target=FBgn0025777.1 301 361 +
ChrX	stalkie_big_nohaplotig	exon	53185561	53185915	99	+	.	Parent=FBgn0025777.1.mrna1;Target=FBgn0025777.1 362 716 +
ChrX	stalkie_big_nohaplotig	exon	53185972	53186050	100	+	.	Parent=FBgn0025777.1.mrna1;Target=FBgn0025777.1 717 795 +
ChrX	stalkie_big_nohaplotig	exon	53187528	53187800	100	+	.	Parent=FBgn0025777.1.mrna1;Target=FBgn0025777.1 796 1068 +
ChrX	stalkie_big_nohaplotig	exon	53187862	53187966	100	+	.	Parent=FBgn0025777.1.mrna1;Target=FBgn0025777.1 1069 1173 +
ChrX	stalkie_big_nohaplotig	CDS	53185095	53185382	.	+	0	Parent=FBgn0025777.1.mrna1;Target=FBgn0025777.1 13 300 +
ChrX	stalkie_big_nohaplotig	CDS	53185445	53185505	.	+	0	Parent=FBgn0025777.1.mrna1;Target=FBgn0025777.1 301 361 +
ChrX	stalkie_big_nohaplotig	CDS	53185561	53185915	.	+	2	Parent=FBgn0025777.1.mrna1;Target=FBgn0025777.1 362 716 +
ChrX	stalkie_big_nohaplotig	CDS	53185972	53186050	.	+	1	Parent=FBgn0025777.1.mrna1;Target=FBgn0025777.1 717 795 +
ChrX	stalkie_big_nohaplotig	CDS	53187528	53187800	.	+	0	Parent=FBgn0025777.1.mrna1;Target=FBgn0025777.1 796 1068 +
ChrX	stalkie_big_nohaplotig	CDS	53187862	53187966	.	+	0	Parent=FBgn0025777.1.mrna1;Target=FBgn0025777.1 1069 1173 +
ChrX	gffcl	locus	53195133	53195785	.	+	.	ID=RLOC_00003099;geneIDs=comp146384_c0_seq1.path1;transcripts=comp146384_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53195133	53195785	.	+	.	ID=comp146384_c0_seq1.mrna1;geneID=comp146384_c0_seq1.path1;Name=comp146384_c0_seq1;Dir=indeterminatecoverage=98.9;identity=97.4;matches=643;mismatches=3;indels=14;unknowns=0;Target=comp146384_c0_seq1 657 5 .;CDS_Target=comp146384_c0_seq1 159 49 .;locus=RLOC_00003099
ChrX	stalkie_big_nohaplotig	exon	53195133	53195785	97	+	.	Parent=comp146384_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53195177	53195287	.	+	0	Parent=comp146384_c0_seq1.mrna1
ChrX	gffcl	locus	53198988	53200449	.	-	.	ID=RLOC_00003100;geneIDs=FBgn0031851.1.path1;transcripts=FBgn0031851.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53198988	53200449	.	-	.	ID=FBgn0031851.1.mrna1;geneID=FBgn0031851.1.path1;Name=FBgn0031851.1;Dir=sensecoverage=100.0;identity=99.5;matches=1394;mismatches=7;indels=0;unknowns=0;locus=RLOC_00003100
ChrX	stalkie_big_nohaplotig	exon	53198988	53199087	100	-	.	Parent=FBgn0031851.1.mrna1;Target=FBgn0031851.1 1302 1401 +
ChrX	stalkie_big_nohaplotig	exon	53199149	53200449	99	-	.	Parent=FBgn0031851.1.mrna1;Target=FBgn0031851.1 1 1301 +
ChrX	stalkie_big_nohaplotig	CDS	53198988	53199087	.	-	1	Parent=FBgn0031851.1.mrna1;Target=FBgn0031851.1 1302 1401 +
ChrX	stalkie_big_nohaplotig	CDS	53199149	53200449	.	-	0	Parent=FBgn0031851.1.mrna1;Target=FBgn0031851.1 1 1301 +
ChrX	gffcl	locus	53202277	53203024	.	-	.	ID=RLOC_00003101;geneIDs=comp146121_c0_seq1.path1;transcripts=comp146121_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53202277	53203024	.	-	.	ID=comp146121_c0_seq1.mrna1;geneID=comp146121_c0_seq1.path1;Name=comp146121_c0_seq1;Dir=antisensecoverage=98.9;identity=100.0;matches=697;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003101
ChrX	stalkie_big_nohaplotig	exon	53202277	53202553	100	-	.	Parent=comp146121_c0_seq1.mrna1;Target=comp146121_c0_seq1 8 284 -
ChrX	stalkie_big_nohaplotig	exon	53202605	53203024	100	-	.	Parent=comp146121_c0_seq1.mrna1;Target=comp146121_c0_seq1 285 704 -
ChrX	stalkie_big_nohaplotig	CDS	53202447	53202553	.	-	2	Parent=comp146121_c0_seq1.mrna1;Target=comp146121_c0_seq1 178 284 .
ChrX	stalkie_big_nohaplotig	CDS	53202605	53202944	.	-	0	Parent=comp146121_c0_seq1.mrna1;Target=comp146121_c0_seq1 285 624 .
ChrX	gffcl	locus	53221168	53222285	.	+	.	ID=RLOC_00003102;geneIDs=comp116200_c0_seq1.path1;transcripts=comp116200_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53221168	53222285	.	+	.	ID=comp116200_c0_seq1.mrna1;geneID=comp116200_c0_seq1.path1;Name=comp116200_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1104;mismatches=6;indels=9;unknowns=0;Target=comp116200_c0_seq1 1111 1 .;CDS_Target=comp116200_c0_seq1 478 275 .;locus=RLOC_00003102
ChrX	stalkie_big_nohaplotig	exon	53221168	53222285	98	+	.	Parent=comp116200_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53221450	53221653	.	+	0	Parent=comp116200_c0_seq1.mrna1
ChrX	gffcl	locus	53233451	53245544	.	+	.	ID=RLOC_00003103;geneIDs=FBgn0025595.1.path1;transcripts=FBgn0025595.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53233451	53245544	.	+	.	ID=FBgn0025595.1.mrna1;geneID=FBgn0025595.1.path1;Name=FBgn0025595.1;Dir=sensecoverage=100.0;identity=98.6;matches=1300;mismatches=5;indels=13;unknowns=0;locus=RLOC_00003103
ChrX	stalkie_big_nohaplotig	exon	53233451	53233644	100	+	.	Parent=FBgn0025595.1.mrna1;Target=FBgn0025595.1 1 194 +
ChrX	stalkie_big_nohaplotig	exon	53236760	53237038	100	+	.	Parent=FBgn0025595.1.mrna1;Target=FBgn0025595.1 195 473 +
ChrX	stalkie_big_nohaplotig	exon	53237180	53237279	100	+	.	Parent=FBgn0025595.1.mrna1;Target=FBgn0025595.1 474 573 +
ChrX	stalkie_big_nohaplotig	exon	53237377	53237600	99	+	.	Parent=FBgn0025595.1.mrna1;Target=FBgn0025595.1 574 796 +
ChrX	stalkie_big_nohaplotig	exon	53243169	53243440	94	+	.	Parent=FBgn0025595.1.mrna1;Target=FBgn0025595.1 797 1068 +
ChrX	stalkie_big_nohaplotig	exon	53245002	53245204	98	+	.	Parent=FBgn0025595.1.mrna1;Target=FBgn0025595.1 1069 1271 +
ChrX	stalkie_big_nohaplotig	exon	53245505	53245544	100	+	.	Parent=FBgn0025595.1.mrna1;Target=FBgn0025595.1 1272 1311 +
ChrX	stalkie_big_nohaplotig	CDS	53233451	53233644	.	+	0	Parent=FBgn0025595.1.mrna1;Target=FBgn0025595.1 1 194 +
ChrX	stalkie_big_nohaplotig	CDS	53236760	53237038	.	+	1	Parent=FBgn0025595.1.mrna1;Target=FBgn0025595.1 195 473 +
ChrX	stalkie_big_nohaplotig	CDS	53237180	53237279	.	+	1	Parent=FBgn0025595.1.mrna1;Target=FBgn0025595.1 474 573 +
ChrX	stalkie_big_nohaplotig	CDS	53237377	53237600	.	+	0	Parent=FBgn0025595.1.mrna1;Target=FBgn0025595.1 574 796 +
ChrX	stalkie_big_nohaplotig	CDS	53243169	53243440	.	+	1	Parent=FBgn0025595.1.mrna1;Target=FBgn0025595.1 797 1068 +
ChrX	stalkie_big_nohaplotig	CDS	53245002	53245204	.	+	2	Parent=FBgn0025595.1.mrna1;Target=FBgn0025595.1 1069 1271 +
ChrX	stalkie_big_nohaplotig	CDS	53245505	53245544	.	+	0	Parent=FBgn0025595.1.mrna1;Target=FBgn0025595.1 1272 1311 +
ChrX	gffcl	locus	53256912	53257484	.	+	.	ID=RLOC_00003104;geneIDs=comp146785_c0_seq1.path1;transcripts=comp146785_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53256912	53257484	.	+	.	ID=comp146785_c0_seq1.mrna1;geneID=comp146785_c0_seq1.path1;Name=comp146785_c0_seq1;Dir=sensecoverage=94.0;identity=99.8;matches=436;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003104
ChrX	stalkie_big_nohaplotig	exon	53256912	53257076	100	+	.	Parent=comp146785_c0_seq1.mrna1;Target=comp146785_c0_seq1 28 192 +
ChrX	stalkie_big_nohaplotig	exon	53257140	53257174	97	+	.	Parent=comp146785_c0_seq1.mrna1;Target=comp146785_c0_seq1 193 227 +
ChrX	stalkie_big_nohaplotig	exon	53257248	53257484	100	+	.	Parent=comp146785_c0_seq1.mrna1;Target=comp146785_c0_seq1 228 464 +
ChrX	stalkie_big_nohaplotig	CDS	53257064	53257076	.	+	0	Parent=comp146785_c0_seq1.mrna1;Target=comp146785_c0_seq1 180 192 +
ChrX	stalkie_big_nohaplotig	CDS	53257140	53257174	.	+	2	Parent=comp146785_c0_seq1.mrna1;Target=comp146785_c0_seq1 193 227 +
ChrX	stalkie_big_nohaplotig	CDS	53257248	53257379	.	+	0	Parent=comp146785_c0_seq1.mrna1;Target=comp146785_c0_seq1 228 359 +
ChrX	gffcl	locus	53326242	53326821	.	-	.	ID=RLOC_00003105;geneIDs=comp153549_c1_seq1.path1;transcripts=comp153549_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53326242	53326821	.	-	.	ID=comp153549_c1_seq1.mrna1;geneID=comp153549_c1_seq1.path1;Name=comp153549_c1_seq1;Dir=antisensecoverage=99.6;identity=98.7;matches=520;mismatches=7;indels=0;unknowns=0;Target=comp153549_c1_seq1 289 438 .;locus=RLOC_00003105
ChrX	stalkie_big_nohaplotig	exon	53326242	53326692	98	-	.	Parent=comp153549_c1_seq1.mrna1;Target=comp153549_c1_seq1 2 452 -
ChrX	stalkie_big_nohaplotig	exon	53326746	53326821	100	-	.	Parent=comp153549_c1_seq1.mrna1;Target=comp153549_c1_seq1 453 528 -
ChrX	stalkie_big_nohaplotig	CDS	53326529	53326678	.	-	0	Parent=comp153549_c1_seq1.mrna1
ChrX	gffcl	locus	53343018	53343491	.	+	.	ID=RLOC_00003106;geneIDs=comp147694_c0_seq1.path1;transcripts=comp147694_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53343018	53343491	.	+	.	ID=comp147694_c0_seq1.mrna1;geneID=comp147694_c0_seq1.path1;Name=comp147694_c0_seq1;Dir=sensecoverage=95.6;identity=99.3;matches=411;mismatches=3;indels=0;unknowns=0;Target=comp147694_c0_seq1 191 358 +;locus=RLOC_00003106
ChrX	stalkie_big_nohaplotig	exon	53343018	53343200	99	+	.	Parent=comp147694_c0_seq1.mrna1;Target=comp147694_c0_seq1 1 183 +
ChrX	stalkie_big_nohaplotig	exon	53343261	53343491	99	+	.	Parent=comp147694_c0_seq1.mrna1;Target=comp147694_c0_seq1 184 414 +
ChrX	stalkie_big_nohaplotig	CDS	53343268	53343435	.	+	0	Parent=comp147694_c0_seq1.mrna1
ChrX	gffcl	locus	53346505	53347110	.	-	.	ID=RLOC_00003107;geneIDs=comp134959_c0_seq1.path1;transcripts=comp134959_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53346505	53347110	.	-	.	ID=comp134959_c0_seq1.mrna1;geneID=comp134959_c0_seq1.path1;Name=comp134959_c0_seq1;Dir=antisensecoverage=99.6;identity=98.7;matches=540;mismatches=3;indels=4;unknowns=0;Target=comp134959_c0_seq1 204 365 .;locus=RLOC_00003107
ChrX	stalkie_big_nohaplotig	exon	53346505	53346878	98	-	.	Parent=comp134959_c0_seq1.mrna1;Target=comp134959_c0_seq1 3 372 -
ChrX	stalkie_big_nohaplotig	exon	53346938	53347110	99	-	.	Parent=comp134959_c0_seq1.mrna1;Target=comp134959_c0_seq1 373 545 -
ChrX	stalkie_big_nohaplotig	CDS	53346710	53346871	.	-	0	Parent=comp134959_c0_seq1.mrna1
ChrX	gffcl	locus	53353101	53364505	.	-	.	ID=RLOC_00003108;geneIDs=FBgn0026439.1.path1;transcripts=FBgn0026439.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53353101	53364505	.	-	.	ID=FBgn0026439.1.mrna1;geneID=FBgn0026439.1.path1;Name=FBgn0026439.1;Dir=sensecoverage=100.0;identity=100.0;matches=1491;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003108
ChrX	stalkie_big_nohaplotig	exon	53353101	53353160	100	-	.	Parent=FBgn0026439.1.mrna1;Target=FBgn0026439.1 1432 1491 +
ChrX	stalkie_big_nohaplotig	exon	53355413	53355509	100	-	.	Parent=FBgn0026439.1.mrna1;Target=FBgn0026439.1 1335 1431 +
ChrX	stalkie_big_nohaplotig	exon	53355579	53356008	100	-	.	Parent=FBgn0026439.1.mrna1;Target=FBgn0026439.1 905 1334 +
ChrX	stalkie_big_nohaplotig	exon	53356066	53356196	100	-	.	Parent=FBgn0026439.1.mrna1;Target=FBgn0026439.1 774 904 +
ChrX	stalkie_big_nohaplotig	exon	53356479	53356662	100	-	.	Parent=FBgn0026439.1.mrna1;Target=FBgn0026439.1 590 773 +
ChrX	stalkie_big_nohaplotig	exon	53356741	53356783	100	-	.	Parent=FBgn0026439.1.mrna1;Target=FBgn0026439.1 547 589 +
ChrX	stalkie_big_nohaplotig	exon	53361154	53361196	100	-	.	Parent=FBgn0026439.1.mrna1;Target=FBgn0026439.1 504 546 +
ChrX	stalkie_big_nohaplotig	exon	53361259	53361426	100	-	.	Parent=FBgn0026439.1.mrna1;Target=FBgn0026439.1 336 503 +
ChrX	stalkie_big_nohaplotig	exon	53363940	53364035	100	-	.	Parent=FBgn0026439.1.mrna1;Target=FBgn0026439.1 240 335 +
ChrX	stalkie_big_nohaplotig	exon	53364267	53364505	100	-	.	Parent=FBgn0026439.1.mrna1;Target=FBgn0026439.1 1 239 +
ChrX	stalkie_big_nohaplotig	CDS	53353101	53353160	.	-	0	Parent=FBgn0026439.1.mrna1;Target=FBgn0026439.1 1432 1491 +
ChrX	stalkie_big_nohaplotig	CDS	53355413	53355509	.	-	1	Parent=FBgn0026439.1.mrna1;Target=FBgn0026439.1 1335 1431 +
ChrX	stalkie_big_nohaplotig	CDS	53355579	53356008	.	-	2	Parent=FBgn0026439.1.mrna1;Target=FBgn0026439.1 905 1334 +
ChrX	stalkie_big_nohaplotig	CDS	53356066	53356196	.	-	1	Parent=FBgn0026439.1.mrna1;Target=FBgn0026439.1 774 904 +
ChrX	stalkie_big_nohaplotig	CDS	53356479	53356662	.	-	2	Parent=FBgn0026439.1.mrna1;Target=FBgn0026439.1 590 773 +
ChrX	stalkie_big_nohaplotig	CDS	53356741	53356783	.	-	0	Parent=FBgn0026439.1.mrna1;Target=FBgn0026439.1 547 589 +
ChrX	stalkie_big_nohaplotig	CDS	53361154	53361196	.	-	1	Parent=FBgn0026439.1.mrna1;Target=FBgn0026439.1 504 546 +
ChrX	stalkie_big_nohaplotig	CDS	53361259	53361426	.	-	1	Parent=FBgn0026439.1.mrna1;Target=FBgn0026439.1 336 503 +
ChrX	stalkie_big_nohaplotig	CDS	53363940	53364035	.	-	1	Parent=FBgn0026439.1.mrna1;Target=FBgn0026439.1 240 335 +
ChrX	stalkie_big_nohaplotig	CDS	53364267	53364505	.	-	0	Parent=FBgn0026439.1.mrna1;Target=FBgn0026439.1 1 239 +
ChrX	gffcl	locus	53449981	53453351	.	.	.	ID=RLOC_00003109;geneIDs=CPIJ017423.1.path2,comp163228_c0_seq1.path3;transcripts=comp163228_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	53449981	53453351	.	-	.	ID=comp163228_c0_seq1.mrna3;geneID=comp163228_c0_seq1.path3;Name=comp163228_c0_seq1;Dir=indeterminatecoverage=95.6;identity=99.0;matches=3354;mismatches=17;indels=16;unknowns=0;Target=comp163228_c0_seq1 3544 158 .;CDS_Target=comp163228_c0_seq1 496 275 .;locus=RLOC_00003109
ChrX	stalkie_big_nohaplotig	exon	53449981	53453351	99	-	.	Parent=comp163228_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	CDS	53453013	53453234	.	-	0	Parent=comp163228_c0_seq1.mrna3
ChrX	gffcl	locus	53465671	53466242	.	-	.	ID=RLOC_00003110;geneIDs=comp146785_c0_seq1.path2;transcripts=comp146785_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	53465671	53466242	.	-	.	ID=comp146785_c0_seq1.mrna2;geneID=comp146785_c0_seq1.path2;Name=comp146785_c0_seq1;Dir=sensecoverage=94.0;identity=99.3;matches=434;mismatches=2;indels=1;unknowns=0;locus=RLOC_00003110
ChrX	stalkie_big_nohaplotig	exon	53465671	53465907	99	-	.	Parent=comp146785_c0_seq1.mrna2;Target=comp146785_c0_seq1 228 464 +
ChrX	stalkie_big_nohaplotig	exon	53465981	53466015	100	-	.	Parent=comp146785_c0_seq1.mrna2;Target=comp146785_c0_seq1 193 227 +
ChrX	stalkie_big_nohaplotig	exon	53466079	53466242	99	-	.	Parent=comp146785_c0_seq1.mrna2;Target=comp146785_c0_seq1 28 192 +
ChrX	stalkie_big_nohaplotig	CDS	53465776	53465907	.	-	0	Parent=comp146785_c0_seq1.mrna2;Target=comp146785_c0_seq1 228 359 +
ChrX	stalkie_big_nohaplotig	CDS	53465981	53466015	.	-	2	Parent=comp146785_c0_seq1.mrna2;Target=comp146785_c0_seq1 193 227 +
ChrX	stalkie_big_nohaplotig	CDS	53466079	53466091	.	-	0	Parent=comp146785_c0_seq1.mrna2;Target=comp146785_c0_seq1 180 192 +
ChrX	gffcl	locus	53476103	53476942	.	-	.	ID=RLOC_00003111;geneIDs=FBgn0031249.1.path1;transcripts=FBgn0031249.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53476103	53476942	.	-	.	ID=FBgn0031249.1.mrna1;geneID=FBgn0031249.1.path1;Name=FBgn0031249.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=840;mismatches=0;indels=0;unknowns=0;Target=FBgn0031249.1 840 1 .;locus=RLOC_00003111
ChrX	stalkie_big_nohaplotig	exon	53476103	53476942	100	-	.	Parent=FBgn0031249.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53476103	53476942	.	-	0	Parent=FBgn0031249.1.mrna1
ChrX	gffcl	locus	53484954	53485447	.	+	.	ID=RLOC_00003112;geneIDs=comp143340_c0_seq1.path1;transcripts=comp143340_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53484954	53485447	.	+	.	ID=comp143340_c0_seq1.mrna1;geneID=comp143340_c0_seq1.path1;Name=comp143340_c0_seq1;Dir=antisensecoverage=82.2;identity=99.4;matches=357;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003112
ChrX	stalkie_big_nohaplotig	exon	53484954	53485079	100	+	.	Parent=comp143340_c0_seq1.mrna1;Target=comp143340_c0_seq1 251 376 -
ChrX	stalkie_big_nohaplotig	exon	53485143	53485177	94	+	.	Parent=comp143340_c0_seq1.mrna1;Target=comp143340_c0_seq1 216 250 -
ChrX	stalkie_big_nohaplotig	exon	53485250	53485447	100	+	.	Parent=comp143340_c0_seq1.mrna1;Target=comp143340_c0_seq1 18 215 -
ChrX	stalkie_big_nohaplotig	CDS	53485067	53485079	.	+	0	Parent=comp143340_c0_seq1.mrna1;Target=comp143340_c0_seq1 251 263 .
ChrX	stalkie_big_nohaplotig	CDS	53485143	53485177	.	+	2	Parent=comp143340_c0_seq1.mrna1;Target=comp143340_c0_seq1 216 250 .
ChrX	stalkie_big_nohaplotig	CDS	53485250	53485381	.	+	0	Parent=comp143340_c0_seq1.mrna1;Target=comp143340_c0_seq1 84 215 .
ChrX	gffcl	locus	53532157	54952969	.	+	.	ID=RLOC_00003113;geneIDs=comp154335_c0_seq1.path1;transcripts=comp154335_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53532157	54952969	.	+	.	ID=comp154335_c0_seq1.mrna1;geneID=comp154335_c0_seq1.path1;Name=comp154335_c0_seq1;Dir=antisensecoverage=82.0;identity=93.8;matches=1665;mismatches=42;indels=68;unknowns=0;Target=comp154335_c0_seq1 1078 1272 .;locus=RLOC_00003113
ChrX	stalkie_big_nohaplotig	exon	53532157	53532161	100	+	.	Parent=comp154335_c0_seq1.mrna1;Target=comp154335_c0_seq1 2117 2121 -
ChrX	stalkie_big_nohaplotig	exon	53534972	53534973	100	+	.	Parent=comp154335_c0_seq1.mrna1;Target=comp154335_c0_seq1 2115 2116 -
ChrX	stalkie_big_nohaplotig	exon	53537850	53537851	100	+	.	Parent=comp154335_c0_seq1.mrna1;Target=comp154335_c0_seq1 2113 2114 -
ChrX	stalkie_big_nohaplotig	exon	53542487	53542494	100	+	.	Parent=comp154335_c0_seq1.mrna1;Target=comp154335_c0_seq1 2105 2112 -
ChrX	stalkie_big_nohaplotig	exon	53547703	53547707	100	+	.	Parent=comp154335_c0_seq1.mrna1;Target=comp154335_c0_seq1 2100 2104 -
ChrX	stalkie_big_nohaplotig	exon	53559604	53559607	100	+	.	Parent=comp154335_c0_seq1.mrna1;Target=comp154335_c0_seq1 2096 2099 -
ChrX	stalkie_big_nohaplotig	exon	53565102	53565108	100	+	.	Parent=comp154335_c0_seq1.mrna1;Target=comp154335_c0_seq1 2089 2095 -
ChrX	stalkie_big_nohaplotig	exon	54614101	54614105	100	+	.	Parent=comp154335_c0_seq1.mrna1;Target=comp154335_c0_seq1 2084 2088 -
ChrX	stalkie_big_nohaplotig	exon	54867929	54867931	100	+	.	Parent=comp154335_c0_seq1.mrna1;Target=comp154335_c0_seq1 2081 2083 -
ChrX	stalkie_big_nohaplotig	exon	54886055	54886838	97	+	.	Parent=comp154335_c0_seq1.mrna1;Target=comp154335_c0_seq1 1279 2080 -
ChrX	stalkie_big_nohaplotig	exon	54888875	54889331	88	+	.	Parent=comp154335_c0_seq1.mrna1;Target=comp154335_c0_seq1 794 1278 -
ChrX	stalkie_big_nohaplotig	exon	54889876	54890259	91	+	.	Parent=comp154335_c0_seq1.mrna1;Target=comp154335_c0_seq1 394 793 -
ChrX	stalkie_big_nohaplotig	exon	54895474	54895475	100	+	.	Parent=comp154335_c0_seq1.mrna1;Target=comp154335_c0_seq1 392 393 -
ChrX	stalkie_big_nohaplotig	exon	54899378	54899384	100	+	.	Parent=comp154335_c0_seq1.mrna1;Target=comp154335_c0_seq1 385 391 -
ChrX	stalkie_big_nohaplotig	exon	54903989	54903992	100	+	.	Parent=comp154335_c0_seq1.mrna1;Target=comp154335_c0_seq1 381 384 -
ChrX	stalkie_big_nohaplotig	exon	54907155	54907161	100	+	.	Parent=comp154335_c0_seq1.mrna1;Target=comp154335_c0_seq1 374 380 -
ChrX	stalkie_big_nohaplotig	exon	54921284	54921288	100	+	.	Parent=comp154335_c0_seq1.mrna1;Target=comp154335_c0_seq1 369 373 -
ChrX	stalkie_big_nohaplotig	exon	54930432	54930437	100	+	.	Parent=comp154335_c0_seq1.mrna1;Target=comp154335_c0_seq1 363 368 -
ChrX	stalkie_big_nohaplotig	exon	54941724	54941727	100	+	.	Parent=comp154335_c0_seq1.mrna1;Target=comp154335_c0_seq1 359 362 -
ChrX	stalkie_big_nohaplotig	exon	54945262	54945267	100	+	.	Parent=comp154335_c0_seq1.mrna1;Target=comp154335_c0_seq1 353 358 -
ChrX	stalkie_big_nohaplotig	exon	54952967	54952969	100	+	.	Parent=comp154335_c0_seq1.mrna1;Target=comp154335_c0_seq1 349 351 -
ChrX	stalkie_big_nohaplotig	CDS	54888881	54889075	.	+	0	Parent=comp154335_c0_seq1.mrna1
ChrX	gffcl	locus	53555357	53556066	.	-	.	ID=RLOC_00003114;geneIDs=FBgn0032511.1.path1;transcripts=FBgn0032511.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53555357	53556066	.	-	.	ID=FBgn0032511.1.mrna1;geneID=FBgn0032511.1.path1;Name=FBgn0032511.1;Dir=sensecoverage=100.0;identity=99.8;matches=533;mismatches=0;indels=1;unknowns=0;locus=RLOC_00003114
ChrX	stalkie_big_nohaplotig	exon	53555357	53555547	100	-	.	Parent=FBgn0032511.1.mrna1;Target=FBgn0032511.1 344 534 +
ChrX	stalkie_big_nohaplotig	exon	53555645	53555784	100	-	.	Parent=FBgn0032511.1.mrna1;Target=FBgn0032511.1 204 343 +
ChrX	stalkie_big_nohaplotig	exon	53555865	53556066	99	-	.	Parent=FBgn0032511.1.mrna1;Target=FBgn0032511.1 1 203 +
ChrX	stalkie_big_nohaplotig	CDS	53555357	53555547	.	-	2	Parent=FBgn0032511.1.mrna1;Target=FBgn0032511.1 344 534 +
ChrX	stalkie_big_nohaplotig	CDS	53555645	53555784	.	-	1	Parent=FBgn0032511.1.mrna1;Target=FBgn0032511.1 204 343 +
ChrX	stalkie_big_nohaplotig	CDS	53555865	53555962	.	-	0	Parent=FBgn0032511.1.mrna1;Target=FBgn0032511.1 106 203 +
ChrX	gffcl	locus	53557303	53558467	.	+	.	ID=RLOC_00003115;geneIDs=comp152233_c0_seq1.path1;transcripts=comp152233_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53557303	53558467	.	+	.	ID=comp152233_c0_seq1.mrna1;geneID=comp152233_c0_seq1.path1;Name=comp152233_c0_seq1;Dir=sensecoverage=99.9;identity=99.3;matches=739;mismatches=5;indels=0;unknowns=0;locus=RLOC_00003115
ChrX	stalkie_big_nohaplotig	exon	53557303	53557346	100	+	.	Parent=comp152233_c0_seq1.mrna1;Target=comp152233_c0_seq1 1 44 +
ChrX	stalkie_big_nohaplotig	exon	53557488	53557524	100	+	.	Parent=comp152233_c0_seq1.mrna1;Target=comp152233_c0_seq1 45 81 +
ChrX	stalkie_big_nohaplotig	exon	53557587	53557798	100	+	.	Parent=comp152233_c0_seq1.mrna1;Target=comp152233_c0_seq1 83 294 +
ChrX	stalkie_big_nohaplotig	exon	53557959	53558089	97	+	.	Parent=comp152233_c0_seq1.mrna1;Target=comp152233_c0_seq1 295 425 +
ChrX	stalkie_big_nohaplotig	exon	53558148	53558467	99	+	.	Parent=comp152233_c0_seq1.mrna1;Target=comp152233_c0_seq1 426 745 +
ChrX	stalkie_big_nohaplotig	CDS	53557507	53557524	.	+	0	Parent=comp152233_c0_seq1.mrna1;Target=comp152233_c0_seq1 64 81 +
ChrX	stalkie_big_nohaplotig	CDS	53557587	53557624	.	+	0	Parent=comp152233_c0_seq1.mrna1;Target=comp152233_c0_seq1 83 120 +
ChrX	gffcl	locus	53566765	53569254	.	+	.	ID=RLOC_00003116;geneIDs=FBgn0032171.1.path1;transcripts=FBgn0032171.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53566765	53569254	.	+	.	ID=FBgn0032171.1.mrna1;geneID=FBgn0032171.1.path1;Name=FBgn0032171.1;Dir=sensecoverage=99.9;identity=99.6;matches=797;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003116
ChrX	stalkie_big_nohaplotig	exon	53566765	53566832	100	+	.	Parent=FBgn0032171.1.mrna1;Target=FBgn0032171.1 1 68 +
ChrX	stalkie_big_nohaplotig	exon	53568523	53569254	99	+	.	Parent=FBgn0032171.1.mrna1;Target=FBgn0032171.1 69 800 +
ChrX	stalkie_big_nohaplotig	CDS	53566765	53566832	.	+	0	Parent=FBgn0032171.1.mrna1;Target=FBgn0032171.1 1 68 +
ChrX	stalkie_big_nohaplotig	CDS	53568523	53569252	.	+	1	Parent=FBgn0032171.1.mrna1;Target=FBgn0032171.1 69 798 +
ChrX	gffcl	locus	53609117	53609819	.	+	.	ID=RLOC_00003117;geneIDs=comp143338_c0_seq1.path1;transcripts=comp143338_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53609117	53609819	.	+	.	ID=comp143338_c0_seq1.mrna1;geneID=comp143338_c0_seq1.path1;Name=comp143338_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=701;mismatches=2;indels=1;unknowns=0;Target=comp143338_c0_seq1 704 1 .;CDS_Target=comp143338_c0_seq1 613 506 .;locus=RLOC_00003117
ChrX	stalkie_big_nohaplotig	exon	53609117	53609819	99	+	.	Parent=comp143338_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53609622	53609729	.	+	0	Parent=comp143338_c0_seq1.mrna1
ChrX	gffcl	locus	53612724	53613452	.	+	.	ID=RLOC_00003118;geneIDs=FBgn0005672.1.path1;transcripts=FBgn0005672.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53612724	53613452	.	+	.	ID=FBgn0005672.1.mrna1;geneID=FBgn0005672.1.path1;Name=FBgn0005672.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=729;mismatches=0;indels=0;unknowns=0;Target=FBgn0005672.1 729 1 .;locus=RLOC_00003118
ChrX	stalkie_big_nohaplotig	exon	53612724	53613452	100	+	.	Parent=FBgn0005672.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53612724	53613452	.	+	0	Parent=FBgn0005672.1.mrna1
ChrX	gffcl	locus	53614395	53614589	.	+	.	ID=RLOC_00003119;geneIDs=comp98654_c0_seq1.path1;transcripts=comp98654_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53614395	53614589	.	+	.	ID=comp98654_c0_seq1.mrna1;geneID=comp98654_c0_seq1.path1;Name=comp98654_c0_seq1;Dir=indeterminatecoverage=91.5;identity=97.9;matches=191;mismatches=4;indels=0;unknowns=0;Target=comp98654_c0_seq1 210 16 .;CDS_Target=comp98654_c0_seq1 73 17 .;locus=RLOC_00003119
ChrX	stalkie_big_nohaplotig	exon	53614395	53614589	97	+	.	Parent=comp98654_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53614396	53614452	.	+	0	Parent=comp98654_c0_seq1.mrna1
ChrX	gffcl	locus	53628192	53631493	.	-	.	ID=RLOC_00003120;geneIDs=FBgn0032810.2.path1;transcripts=FBgn0032810.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53628192	53631493	.	-	.	ID=FBgn0032810.2.mrna1;geneID=FBgn0032810.2.path1;Name=FBgn0032810.2;Dir=sensecoverage=100.0;identity=98.5;matches=530;mismatches=0;indels=8;unknowns=0;Target=FBgn0032810.2 2 19 +;locus=RLOC_00003120
ChrX	stalkie_big_nohaplotig	exon	53628192	53628288	98	-	.	Parent=FBgn0032810.2.mrna1;Target=FBgn0032810.2 434 531 +
ChrX	stalkie_big_nohaplotig	exon	53628353	53628545	100	-	.	Parent=FBgn0032810.2.mrna1;Target=FBgn0032810.2 241 433 +
ChrX	stalkie_big_nohaplotig	exon	53631247	53631493	97	-	.	Parent=FBgn0032810.2.mrna1;Target=FBgn0032810.2 1 240 +
ChrX	stalkie_big_nohaplotig	CDS	53631468	53631492	.	-	0	Parent=FBgn0032810.2.mrna1
ChrX	gffcl	locus	53639661	53642872	.	-	.	ID=RLOC_00003121;geneIDs=FBgn0032810.3.path1;transcripts=FBgn0032810.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53639661	53642872	.	-	.	ID=FBgn0032810.3.mrna1;geneID=FBgn0032810.3.path1;Name=FBgn0032810.3;Dir=sensecoverage=100.0;identity=100.0;matches=1032;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003121
ChrX	stalkie_big_nohaplotig	exon	53639661	53639971	100	-	.	Parent=FBgn0032810.3.mrna1;Target=FBgn0032810.3 722 1032 +
ChrX	stalkie_big_nohaplotig	exon	53640032	53640224	100	-	.	Parent=FBgn0032810.3.mrna1;Target=FBgn0032810.3 529 721 +
ChrX	stalkie_big_nohaplotig	exon	53642345	53642872	100	-	.	Parent=FBgn0032810.3.mrna1;Target=FBgn0032810.3 1 528 +
ChrX	stalkie_big_nohaplotig	CDS	53639661	53639971	.	-	2	Parent=FBgn0032810.3.mrna1;Target=FBgn0032810.3 722 1032 +
ChrX	stalkie_big_nohaplotig	CDS	53640032	53640224	.	-	0	Parent=FBgn0032810.3.mrna1;Target=FBgn0032810.3 529 721 +
ChrX	stalkie_big_nohaplotig	CDS	53642345	53642872	.	-	0	Parent=FBgn0032810.3.mrna1;Target=FBgn0032810.3 1 528 +
ChrX	gffcl	locus	53643861	53645445	.	.	.	ID=RLOC_00003122;geneIDs=comp118384_c0_seq1.path1,comp148180_c0_seq1.path1;transcripts=comp148180_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53643861	53644740	.	+	.	ID=comp148180_c0_seq1.mrna1;geneID=comp148180_c0_seq1.path1;Name=comp148180_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=873;mismatches=7;indels=0;unknowns=0;Target=comp148180_c0_seq1 880 1 .;CDS_Target=comp148180_c0_seq1 669 496 .;locus=RLOC_00003122
ChrX	stalkie_big_nohaplotig	exon	53643861	53644740	99	+	.	Parent=comp148180_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53644356	53644529	.	+	0	Parent=comp148180_c0_seq1.mrna1
ChrX	gffcl	locus	53667112	53669719	.	+	.	ID=RLOC_00003123;geneIDs=FBgn0032810.4.path1;transcripts=FBgn0032810.4.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53667112	53669719	.	+	.	ID=FBgn0032810.4.mrna1;geneID=FBgn0032810.4.path1;Name=FBgn0032810.4;Dir=sensecoverage=100.0;identity=99.9;matches=770;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003123
ChrX	stalkie_big_nohaplotig	exon	53667112	53667393	99	+	.	Parent=FBgn0032810.4.mrna1;Target=FBgn0032810.4 1 282 +
ChrX	stalkie_big_nohaplotig	exon	53669162	53669354	100	+	.	Parent=FBgn0032810.4.mrna1;Target=FBgn0032810.4 283 475 +
ChrX	stalkie_big_nohaplotig	exon	53669424	53669719	100	+	.	Parent=FBgn0032810.4.mrna1;Target=FBgn0032810.4 476 771 +
ChrX	stalkie_big_nohaplotig	CDS	53667157	53667393	.	+	0	Parent=FBgn0032810.4.mrna1;Target=FBgn0032810.4 46 282 +
ChrX	stalkie_big_nohaplotig	CDS	53669162	53669354	.	+	0	Parent=FBgn0032810.4.mrna1;Target=FBgn0032810.4 283 475 +
ChrX	stalkie_big_nohaplotig	CDS	53669424	53669719	.	+	2	Parent=FBgn0032810.4.mrna1;Target=FBgn0032810.4 476 771 +
ChrX	gffcl	locus	53673302	53678525	.	+	.	ID=RLOC_00003124;geneIDs=comp146750_c1_seq1.path1;transcripts=comp146750_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53673302	53678525	.	+	.	ID=comp146750_c1_seq1.mrna1;geneID=comp146750_c1_seq1.path1;Name=comp146750_c1_seq1;Dir=antisensecoverage=99.8;identity=99.5;matches=411;mismatches=1;indels=1;unknowns=0;Target=comp146750_c1_seq1 234 413 .;locus=RLOC_00003124
ChrX	stalkie_big_nohaplotig	exon	53673302	53673515	99	+	.	Parent=comp146750_c1_seq1.mrna1;Target=comp146750_c1_seq1 199 413 -
ChrX	stalkie_big_nohaplotig	exon	53674036	53674138	100	+	.	Parent=comp146750_c1_seq1.mrna1;Target=comp146750_c1_seq1 96 198 -
ChrX	stalkie_big_nohaplotig	exon	53678431	53678525	100	+	.	Parent=comp146750_c1_seq1.mrna1;Target=comp146750_c1_seq1 1 95 -
ChrX	stalkie_big_nohaplotig	CDS	53673302	53673480	.	+	0	Parent=comp146750_c1_seq1.mrna1
ChrX	gffcl	locus	53688990	53689800	.	-	.	ID=RLOC_00003125;geneIDs=comp154799_c0_seq1.path1;transcripts=comp154799_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53688990	53689800	.	-	.	ID=comp154799_c0_seq1.mrna1;geneID=comp154799_c0_seq1.path1;Name=comp154799_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=801;mismatches=10;indels=1;unknowns=0;Target=comp154799_c0_seq1 812 1 .;CDS_Target=comp154799_c0_seq1 499 308 .;locus=RLOC_00003125
ChrX	stalkie_big_nohaplotig	exon	53688990	53689800	98	-	.	Parent=comp154799_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53689302	53689493	.	-	0	Parent=comp154799_c0_seq1.mrna1
ChrX	gffcl	locus	53693488	53695088	.	-	.	ID=RLOC_00003126;geneIDs=comp159792_c0_seq1.path1;transcripts=comp159792_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53693488	53695088	.	-	.	ID=comp159792_c0_seq1.mrna1;geneID=comp159792_c0_seq1.path1;Name=comp159792_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1597;mismatches=4;indels=1;unknowns=0;Target=comp159792_c0_seq1 1602 1 .;CDS_Target=comp159792_c0_seq1 1514 1377 .;locus=RLOC_00003126
ChrX	stalkie_big_nohaplotig	exon	53693488	53695088	99	-	.	Parent=comp159792_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53693576	53693713	.	-	0	Parent=comp159792_c0_seq1.mrna1
ChrX	gffcl	locus	53702137	53702261	.	+	.	ID=RLOC_00003127;geneIDs=comp151824_c0_seq1.path1;transcripts=comp151824_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53702137	53702261	.	+	.	ID=comp151824_c0_seq1.mrna1;geneID=comp151824_c0_seq1.path1;Name=comp151824_c0_seq1;Dir=indeterminatecoverage=58.0;identity=83.1;matches=108;mismatches=17;indels=5;unknowns=0;Target=comp151824_c0_seq1 151 22 .;CDS_Target=comp151824_c0_seq1 32 24 .;locus=RLOC_00003127
ChrX	stalkie_big_nohaplotig	exon	53702137	53702261	83	+	.	Parent=comp151824_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53702139	53702147	.	+	0	Parent=comp151824_c0_seq1.mrna1
ChrX	gffcl	locus	53706701	53764419	.	+	.	ID=RLOC_00003128;geneIDs=FBgn0032252.2.path1;transcripts=FBgn0032252.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53706701	53764419	.	+	.	ID=FBgn0032252.2.mrna1;geneID=FBgn0032252.2.path1;Name=FBgn0032252.2;Dir=sensecoverage=100.0;identity=99.1;matches=2468;mismatches=22;indels=0;unknowns=0;locus=RLOC_00003128
ChrX	stalkie_big_nohaplotig	exon	53706701	53706735	100	+	.	Parent=FBgn0032252.2.mrna1;Target=FBgn0032252.2 1 35 +
ChrX	stalkie_big_nohaplotig	exon	53715681	53716001	98	+	.	Parent=FBgn0032252.2.mrna1;Target=FBgn0032252.2 36 356 +
ChrX	stalkie_big_nohaplotig	exon	53716068	53716440	99	+	.	Parent=FBgn0032252.2.mrna1;Target=FBgn0032252.2 357 729 +
ChrX	stalkie_big_nohaplotig	exon	53760759	53760957	100	+	.	Parent=FBgn0032252.2.mrna1;Target=FBgn0032252.2 730 928 +
ChrX	stalkie_big_nohaplotig	exon	53761031	53761185	97	+	.	Parent=FBgn0032252.2.mrna1;Target=FBgn0032252.2 929 1083 +
ChrX	stalkie_big_nohaplotig	exon	53761255	53762349	99	+	.	Parent=FBgn0032252.2.mrna1;Target=FBgn0032252.2 1084 2178 +
ChrX	stalkie_big_nohaplotig	exon	53763898	53764048	98	+	.	Parent=FBgn0032252.2.mrna1;Target=FBgn0032252.2 2179 2329 +
ChrX	stalkie_big_nohaplotig	exon	53764259	53764419	100	+	.	Parent=FBgn0032252.2.mrna1;Target=FBgn0032252.2 2330 2490 +
ChrX	stalkie_big_nohaplotig	CDS	53706701	53706735	.	+	0	Parent=FBgn0032252.2.mrna1;Target=FBgn0032252.2 1 35 +
ChrX	stalkie_big_nohaplotig	CDS	53715681	53716001	.	+	1	Parent=FBgn0032252.2.mrna1;Target=FBgn0032252.2 36 356 +
ChrX	stalkie_big_nohaplotig	CDS	53716068	53716440	.	+	1	Parent=FBgn0032252.2.mrna1;Target=FBgn0032252.2 357 729 +
ChrX	stalkie_big_nohaplotig	CDS	53760759	53760957	.	+	0	Parent=FBgn0032252.2.mrna1;Target=FBgn0032252.2 730 928 +
ChrX	stalkie_big_nohaplotig	CDS	53761031	53761185	.	+	2	Parent=FBgn0032252.2.mrna1;Target=FBgn0032252.2 929 1083 +
ChrX	stalkie_big_nohaplotig	CDS	53761255	53762349	.	+	0	Parent=FBgn0032252.2.mrna1;Target=FBgn0032252.2 1084 2178 +
ChrX	stalkie_big_nohaplotig	CDS	53763898	53764048	.	+	0	Parent=FBgn0032252.2.mrna1;Target=FBgn0032252.2 2179 2329 +
ChrX	stalkie_big_nohaplotig	CDS	53764259	53764419	.	+	2	Parent=FBgn0032252.2.mrna1;Target=FBgn0032252.2 2330 2490 +
ChrX	gffcl	locus	53754656	53766261	.	-	.	ID=RLOC_00003129;geneIDs=comp135136_c0_seq1.path1;transcripts=comp135136_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53754656	53766261	.	-	.	ID=comp135136_c0_seq1.mrna1;geneID=comp135136_c0_seq1.path1;Name=comp135136_c0_seq1;Dir=indeterminatecoverage=93.5;identity=99.2;matches=883;mismatches=7;indels=0;unknowns=0;Target=comp135136_c0_seq1 108 1 .;locus=RLOC_00003129
ChrX	stalkie_big_nohaplotig	exon	53754656	53754659	100	-	.	Parent=comp135136_c0_seq1.mrna1;Target=comp135136_c0_seq1 890 887 .
ChrX	stalkie_big_nohaplotig	exon	53761866	53761873	100	-	.	Parent=comp135136_c0_seq1.mrna1;Target=comp135136_c0_seq1 886 879 .
ChrX	stalkie_big_nohaplotig	exon	53765384	53766261	99	-	.	Parent=comp135136_c0_seq1.mrna1;Target=comp135136_c0_seq1 878 1 .
ChrX	stalkie_big_nohaplotig	CDS	53766154	53766261	.	-	0	Parent=comp135136_c0_seq1.mrna1
ChrX	gffcl	locus	53765209	53765270	.	+	.	ID=RLOC_00003130;geneIDs=comp135136_c0_seq1.path2;transcripts=comp135136_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	53765209	53765270	.	+	.	ID=comp135136_c0_seq1.mrna2;geneID=comp135136_c0_seq1.path2;Name=comp135136_c0_seq1;Dir=indeterminatecoverage=6.5;identity=100.0;matches=62;mismatches=0;indels=0;unknowns=0;Target=comp135136_c0_seq1 952 891 .;locus=RLOC_00003130
ChrX	stalkie_big_nohaplotig	exon	53765209	53765270	100	+	.	Parent=comp135136_c0_seq1.mrna2
ChrX	gffcl	locus	53766331	53767123	.	-	.	ID=RLOC_00003131;geneIDs=comp141917_c0_seq1.path1;transcripts=comp141917_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53766331	53767123	.	-	.	ID=comp141917_c0_seq1.mrna1;geneID=comp141917_c0_seq1.path1;Name=comp141917_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=789;mismatches=4;indels=0;unknowns=0;Target=comp141917_c0_seq1 793 1 .;CDS_Target=comp141917_c0_seq1 96 1 .;locus=RLOC_00003131
ChrX	stalkie_big_nohaplotig	exon	53766331	53767123	99	-	.	Parent=comp141917_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53767028	53767123	.	-	0	Parent=comp141917_c0_seq1.mrna1
ChrX	gffcl	locus	53833968	53960290	.	+	.	ID=RLOC_00003132;geneIDs=FBgn0032252.1.path1;transcripts=FBgn0032252.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53833968	53960290	.	+	.	ID=FBgn0032252.1.mrna1;geneID=FBgn0032252.1.path1;Name=FBgn0032252.1;Dir=sensecoverage=100.0;identity=99.8;matches=2733;mismatches=6;indels=0;unknowns=0;locus=RLOC_00003132
ChrX	stalkie_big_nohaplotig	exon	53833968	53834035	98	+	.	Parent=FBgn0032252.1.mrna1;Target=FBgn0032252.1 1 68 +
ChrX	stalkie_big_nohaplotig	exon	53847737	53847803	100	+	.	Parent=FBgn0032252.1.mrna1;Target=FBgn0032252.1 69 135 +
ChrX	stalkie_big_nohaplotig	exon	53862001	53862614	100	+	.	Parent=FBgn0032252.1.mrna1;Target=FBgn0032252.1 136 749 +
ChrX	stalkie_big_nohaplotig	exon	53894259	53894337	100	+	.	Parent=FBgn0032252.1.mrna1;Target=FBgn0032252.1 750 828 +
ChrX	stalkie_big_nohaplotig	exon	53894403	53894505	99	+	.	Parent=FBgn0032252.1.mrna1;Target=FBgn0032252.1 829 931 +
ChrX	stalkie_big_nohaplotig	exon	53895516	53895673	98	+	.	Parent=FBgn0032252.1.mrna1;Target=FBgn0032252.1 932 1089 +
ChrX	stalkie_big_nohaplotig	exon	53956265	53956466	100	+	.	Parent=FBgn0032252.1.mrna1;Target=FBgn0032252.1 1090 1291 +
ChrX	stalkie_big_nohaplotig	exon	53956580	53956761	100	+	.	Parent=FBgn0032252.1.mrna1;Target=FBgn0032252.1 1292 1473 +
ChrX	stalkie_big_nohaplotig	exon	53957291	53958265	99	+	.	Parent=FBgn0032252.1.mrna1;Target=FBgn0032252.1 1474 2448 +
ChrX	stalkie_big_nohaplotig	exon	53958350	53958500	100	+	.	Parent=FBgn0032252.1.mrna1;Target=FBgn0032252.1 2449 2599 +
ChrX	stalkie_big_nohaplotig	exon	53960151	53960290	100	+	.	Parent=FBgn0032252.1.mrna1;Target=FBgn0032252.1 2600 2739 +
ChrX	stalkie_big_nohaplotig	CDS	53833968	53834035	.	+	0	Parent=FBgn0032252.1.mrna1;Target=FBgn0032252.1 1 68 +
ChrX	stalkie_big_nohaplotig	CDS	53847737	53847803	.	+	1	Parent=FBgn0032252.1.mrna1;Target=FBgn0032252.1 69 135 +
ChrX	stalkie_big_nohaplotig	CDS	53862001	53862614	.	+	0	Parent=FBgn0032252.1.mrna1;Target=FBgn0032252.1 136 749 +
ChrX	stalkie_big_nohaplotig	CDS	53894259	53894337	.	+	1	Parent=FBgn0032252.1.mrna1;Target=FBgn0032252.1 750 828 +
ChrX	stalkie_big_nohaplotig	CDS	53894403	53894505	.	+	0	Parent=FBgn0032252.1.mrna1;Target=FBgn0032252.1 829 931 +
ChrX	stalkie_big_nohaplotig	CDS	53895516	53895673	.	+	2	Parent=FBgn0032252.1.mrna1;Target=FBgn0032252.1 932 1089 +
ChrX	stalkie_big_nohaplotig	CDS	53956265	53956466	.	+	0	Parent=FBgn0032252.1.mrna1;Target=FBgn0032252.1 1090 1291 +
ChrX	stalkie_big_nohaplotig	CDS	53956580	53956761	.	+	2	Parent=FBgn0032252.1.mrna1;Target=FBgn0032252.1 1292 1473 +
ChrX	stalkie_big_nohaplotig	CDS	53957291	53958265	.	+	0	Parent=FBgn0032252.1.mrna1;Target=FBgn0032252.1 1474 2448 +
ChrX	stalkie_big_nohaplotig	CDS	53958350	53958500	.	+	0	Parent=FBgn0032252.1.mrna1;Target=FBgn0032252.1 2449 2599 +
ChrX	stalkie_big_nohaplotig	CDS	53960151	53960290	.	+	2	Parent=FBgn0032252.1.mrna1;Target=FBgn0032252.1 2600 2739 +
ChrX	gffcl	locus	53873767	53874613	.	+	.	ID=RLOC_00003133;geneIDs=ORF2969.path1;transcripts=ORF2969.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53873767	53874613	.	+	.	ID=ORF2969.mrna1;geneID=ORF2969.path1;Name=ORF2969;Dir=sensecoverage=100.0;identity=100.0;matches=783;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003133
ChrX	stalkie_big_nohaplotig	exon	53873767	53873871	100	+	.	Parent=ORF2969.mrna1;Target=ORF2969 1 105 +
ChrX	stalkie_big_nohaplotig	exon	53873936	53874613	100	+	.	Parent=ORF2969.mrna1;Target=ORF2969 106 783 +
ChrX	stalkie_big_nohaplotig	CDS	53873767	53873871	.	+	0	Parent=ORF2969.mrna1;Target=ORF2969 1 105 +
ChrX	stalkie_big_nohaplotig	CDS	53873936	53874613	.	+	0	Parent=ORF2969.mrna1;Target=ORF2969 106 783 +
ChrX	gffcl	locus	53883707	53886204	.	+	.	ID=RLOC_00003134;geneIDs=comp152251_c0_seq1.path1;transcripts=comp152251_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53883707	53886204	.	+	.	ID=comp152251_c0_seq1.mrna1;geneID=comp152251_c0_seq1.path1;Name=comp152251_c0_seq1;Dir=indeterminatecoverage=73.8;identity=88.6;matches=1103;mismatches=41;indels=101;unknowns=0;Target=comp152251_c0_seq1 1212 1207 .;locus=RLOC_00003134
ChrX	stalkie_big_nohaplotig	exon	53883707	53883713	11	+	.	Parent=comp152251_c0_seq1.mrna1;Target=comp152251_c0_seq1 452 394 .
ChrX	stalkie_big_nohaplotig	exon	53885047	53886204	92	+	.	Parent=comp152251_c0_seq1.mrna1;Target=comp152251_c0_seq1 1617 453 .
ChrX	stalkie_big_nohaplotig	CDS	53885807	53885812	.	+	0	Parent=comp152251_c0_seq1.mrna1
ChrX	gffcl	locus	53883828	53886738	.	-	.	ID=RLOC_00003135;geneIDs=comp134786_c0_seq1.path1;transcripts=comp134786_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53883828	53886738	.	-	.	ID=comp134786_c0_seq1.mrna1;geneID=comp134786_c0_seq1.path1;Name=comp134786_c0_seq1;Dir=antisensecoverage=99.3;identity=98.7;matches=814;mismatches=10;indels=1;unknowns=0;locus=RLOC_00003135
ChrX	stalkie_big_nohaplotig	exon	53883828	53884485	98	-	.	Parent=comp134786_c0_seq1.mrna1;Target=comp134786_c0_seq1 7 665 -
ChrX	stalkie_big_nohaplotig	exon	53886573	53886738	100	-	.	Parent=comp134786_c0_seq1.mrna1;Target=comp134786_c0_seq1 666 831 -
ChrX	stalkie_big_nohaplotig	CDS	53884177	53884485	.	-	0	Parent=comp134786_c0_seq1.mrna1;Target=comp134786_c0_seq1 357 665 .
ChrX	stalkie_big_nohaplotig	CDS	53886573	53886623	.	-	0	Parent=comp134786_c0_seq1.mrna1;Target=comp134786_c0_seq1 666 716 .
ChrX	gffcl	locus	53961721	53961956	.	+	.	ID=RLOC_00003136;geneIDs=comp135220_c0_seq1.path1;transcripts=comp135220_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53961721	53961956	.	+	.	ID=comp135220_c0_seq1.mrna1;geneID=comp135220_c0_seq1.path1;Name=comp135220_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=235;mismatches=1;indels=0;unknowns=0;Target=comp135220_c0_seq1 236 1 .;CDS_Target=comp135220_c0_seq1 227 156 .;locus=RLOC_00003136
ChrX	stalkie_big_nohaplotig	exon	53961721	53961956	99	+	.	Parent=comp135220_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53961876	53961947	.	+	0	Parent=comp135220_c0_seq1.mrna1
ChrX	gffcl	locus	53972533	53979676	.	-	.	ID=RLOC_00003137;geneIDs=FBgn0027611.1.path1,comp149663_c0_seq1.path1;transcripts=FBgn0027611.1.mrna1,comp149663_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53972533	53979676	.	-	.	ID=FBgn0027611.1.mrna1;geneID=FBgn0027611.1.path1;Name=FBgn0027611.1;Dir=sensecoverage=100.0;identity=100.0;matches=3264;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003137
ChrX	stalkie_big_nohaplotig	exon	53972533	53973105	100	-	.	Parent=FBgn0027611.1.mrna1;Target=FBgn0027611.1 2692 3264 +
ChrX	stalkie_big_nohaplotig	exon	53973165	53974019	100	-	.	Parent=FBgn0027611.1.mrna1;Target=FBgn0027611.1 1837 2691 +
ChrX	stalkie_big_nohaplotig	exon	53974755	53974969	100	-	.	Parent=FBgn0027611.1.mrna1;Target=FBgn0027611.1 1622 1836 +
ChrX	stalkie_big_nohaplotig	exon	53975030	53975679	100	-	.	Parent=FBgn0027611.1.mrna1;Target=FBgn0027611.1 972 1621 +
ChrX	stalkie_big_nohaplotig	exon	53976955	53977088	100	-	.	Parent=FBgn0027611.1.mrna1;Target=FBgn0027611.1 838 971 +
ChrX	stalkie_big_nohaplotig	exon	53977203	53977339	100	-	.	Parent=FBgn0027611.1.mrna1;Target=FBgn0027611.1 701 837 +
ChrX	stalkie_big_nohaplotig	exon	53977400	53977605	100	-	.	Parent=FBgn0027611.1.mrna1;Target=FBgn0027611.1 495 700 +
ChrX	stalkie_big_nohaplotig	exon	53977670	53978040	100	-	.	Parent=FBgn0027611.1.mrna1;Target=FBgn0027611.1 124 494 +
ChrX	stalkie_big_nohaplotig	exon	53979554	53979676	100	-	.	Parent=FBgn0027611.1.mrna1;Target=FBgn0027611.1 1 123 +
ChrX	stalkie_big_nohaplotig	CDS	53972533	53973105	.	-	0	Parent=FBgn0027611.1.mrna1;Target=FBgn0027611.1 2692 3264 +
ChrX	stalkie_big_nohaplotig	CDS	53973165	53974019	.	-	0	Parent=FBgn0027611.1.mrna1;Target=FBgn0027611.1 1837 2691 +
ChrX	stalkie_big_nohaplotig	CDS	53974755	53974969	.	-	2	Parent=FBgn0027611.1.mrna1;Target=FBgn0027611.1 1622 1836 +
ChrX	stalkie_big_nohaplotig	CDS	53975030	53975679	.	-	1	Parent=FBgn0027611.1.mrna1;Target=FBgn0027611.1 972 1621 +
ChrX	stalkie_big_nohaplotig	CDS	53976955	53977088	.	-	0	Parent=FBgn0027611.1.mrna1;Target=FBgn0027611.1 838 971 +
ChrX	stalkie_big_nohaplotig	CDS	53977203	53977339	.	-	2	Parent=FBgn0027611.1.mrna1;Target=FBgn0027611.1 701 837 +
ChrX	stalkie_big_nohaplotig	CDS	53977400	53977605	.	-	1	Parent=FBgn0027611.1.mrna1;Target=FBgn0027611.1 495 700 +
ChrX	stalkie_big_nohaplotig	CDS	53977670	53978040	.	-	0	Parent=FBgn0027611.1.mrna1;Target=FBgn0027611.1 124 494 +
ChrX	stalkie_big_nohaplotig	CDS	53979554	53979676	.	-	0	Parent=FBgn0027611.1.mrna1;Target=FBgn0027611.1 1 123 +
ChrX	stalkie_big_nohaplotig	mRNA	53974223	53974778	.	-	.	ID=comp149663_c0_seq1.mrna1;geneID=comp149663_c0_seq1.path1;Name=comp149663_c0_seq1;Dir=indeterminatecoverage=100.0;identity=85.5;matches=514;mismatches=33;indels=54;unknowns=0;Target=comp149663_c0_seq1 592 1 .;CDS_Target=comp149663_c0_seq1 39 1 .;locus=RLOC_00003137
ChrX	stalkie_big_nohaplotig	exon	53974223	53974778	85	-	.	Parent=comp149663_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53974740	53974778	.	-	0	Parent=comp149663_c0_seq1.mrna1
ChrX	gffcl	locus	53984291	53985079	.	+	.	ID=RLOC_00003138;geneIDs=ORF2918.path1;transcripts=ORF2918.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53984291	53985079	.	+	.	ID=ORF2918.mrna1;geneID=ORF2918.path1;Name=ORF2918;Dir=indeterminatecoverage=100.0;identity=99.4;matches=784;mismatches=5;indels=0;unknowns=0;Target=ORF2918 789 1 .;locus=RLOC_00003138
ChrX	stalkie_big_nohaplotig	exon	53984291	53985079	99	+	.	Parent=ORF2918.mrna1
ChrX	stalkie_big_nohaplotig	CDS	53984291	53985079	.	+	0	Parent=ORF2918.mrna1
ChrX	gffcl	locus	53993943	54003644	.	+	.	ID=RLOC_00003139;geneIDs=FBgn0032253.1.path1;transcripts=FBgn0032253.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	53993943	54003644	.	+	.	ID=FBgn0032253.1.mrna1;geneID=FBgn0032253.1.path1;Name=FBgn0032253.1;Dir=sensecoverage=100.0;identity=100.0;matches=2999;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003139
ChrX	stalkie_big_nohaplotig	exon	53993943	53994038	100	+	.	Parent=FBgn0032253.1.mrna1;Target=FBgn0032253.1 1 96 +
ChrX	stalkie_big_nohaplotig	exon	53998774	53998958	100	+	.	Parent=FBgn0032253.1.mrna1;Target=FBgn0032253.1 97 281 +
ChrX	stalkie_big_nohaplotig	exon	53999046	53999231	100	+	.	Parent=FBgn0032253.1.mrna1;Target=FBgn0032253.1 282 467 +
ChrX	stalkie_big_nohaplotig	exon	53999305	53999510	100	+	.	Parent=FBgn0032253.1.mrna1;Target=FBgn0032253.1 468 673 +
ChrX	stalkie_big_nohaplotig	exon	53999574	53999707	100	+	.	Parent=FBgn0032253.1.mrna1;Target=FBgn0032253.1 674 807 +
ChrX	stalkie_big_nohaplotig	exon	54001265	54001398	100	+	.	Parent=FBgn0032253.1.mrna1;Target=FBgn0032253.1 808 941 +
ChrX	stalkie_big_nohaplotig	exon	54001460	54002076	100	+	.	Parent=FBgn0032253.1.mrna1;Target=FBgn0032253.1 942 1558 +
ChrX	stalkie_big_nohaplotig	exon	54002139	54002386	100	+	.	Parent=FBgn0032253.1.mrna1;Target=FBgn0032253.1 1559 1806 +
ChrX	stalkie_big_nohaplotig	exon	54002451	54003644	99	+	.	Parent=FBgn0032253.1.mrna1;Target=FBgn0032253.1 1807 3000 +
ChrX	stalkie_big_nohaplotig	CDS	53993943	53994038	.	+	0	Parent=FBgn0032253.1.mrna1;Target=FBgn0032253.1 1 96 +
ChrX	stalkie_big_nohaplotig	CDS	53998774	53998958	.	+	0	Parent=FBgn0032253.1.mrna1;Target=FBgn0032253.1 97 281 +
ChrX	stalkie_big_nohaplotig	CDS	53999046	53999231	.	+	1	Parent=FBgn0032253.1.mrna1;Target=FBgn0032253.1 282 467 +
ChrX	stalkie_big_nohaplotig	CDS	53999305	53999510	.	+	1	Parent=FBgn0032253.1.mrna1;Target=FBgn0032253.1 468 673 +
ChrX	stalkie_big_nohaplotig	CDS	53999574	53999707	.	+	2	Parent=FBgn0032253.1.mrna1;Target=FBgn0032253.1 674 807 +
ChrX	stalkie_big_nohaplotig	CDS	54001265	54001398	.	+	0	Parent=FBgn0032253.1.mrna1;Target=FBgn0032253.1 808 941 +
ChrX	stalkie_big_nohaplotig	CDS	54001460	54002076	.	+	1	Parent=FBgn0032253.1.mrna1;Target=FBgn0032253.1 942 1558 +
ChrX	stalkie_big_nohaplotig	CDS	54002139	54002386	.	+	2	Parent=FBgn0032253.1.mrna1;Target=FBgn0032253.1 1559 1806 +
ChrX	stalkie_big_nohaplotig	CDS	54002451	54003644	.	+	0	Parent=FBgn0032253.1.mrna1;Target=FBgn0032253.1 1807 3000 +
ChrX	gffcl	locus	54005905	54030520	.	-	.	ID=RLOC_00003140;geneIDs=FBgn0000442.1.path1;transcripts=FBgn0000442.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54005905	54030520	.	-	.	ID=FBgn0000442.1.mrna1;geneID=FBgn0000442.1.path1;Name=FBgn0000442.1;Dir=sensecoverage=100.0;identity=99.9;matches=4395;mismatches=6;indels=0;unknowns=0;locus=RLOC_00003140
ChrX	stalkie_big_nohaplotig	exon	54005905	54006064	99	-	.	Parent=FBgn0000442.1.mrna1;Target=FBgn0000442.1 4242 4401 +
ChrX	stalkie_big_nohaplotig	exon	54006144	54006329	100	-	.	Parent=FBgn0000442.1.mrna1;Target=FBgn0000442.1 4056 4241 +
ChrX	stalkie_big_nohaplotig	exon	54008087	54008250	100	-	.	Parent=FBgn0000442.1.mrna1;Target=FBgn0000442.1 3892 4055 +
ChrX	stalkie_big_nohaplotig	exon	54009257	54009708	99	-	.	Parent=FBgn0000442.1.mrna1;Target=FBgn0000442.1 3440 3891 +
ChrX	stalkie_big_nohaplotig	exon	54009779	54010148	100	-	.	Parent=FBgn0000442.1.mrna1;Target=FBgn0000442.1 3070 3439 +
ChrX	stalkie_big_nohaplotig	exon	54010220	54010670	100	-	.	Parent=FBgn0000442.1.mrna1;Target=FBgn0000442.1 2619 3069 +
ChrX	stalkie_big_nohaplotig	exon	54010869	54011293	100	-	.	Parent=FBgn0000442.1.mrna1;Target=FBgn0000442.1 2194 2618 +
ChrX	stalkie_big_nohaplotig	exon	54022134	54022571	99	-	.	Parent=FBgn0000442.1.mrna1;Target=FBgn0000442.1 1756 2193 +
ChrX	stalkie_big_nohaplotig	exon	54028766	54030520	99	-	.	Parent=FBgn0000442.1.mrna1;Target=FBgn0000442.1 1 1755 +
ChrX	stalkie_big_nohaplotig	CDS	54005905	54006064	.	-	1	Parent=FBgn0000442.1.mrna1;Target=FBgn0000442.1 4242 4401 +
ChrX	stalkie_big_nohaplotig	CDS	54006144	54006329	.	-	1	Parent=FBgn0000442.1.mrna1;Target=FBgn0000442.1 4056 4241 +
ChrX	stalkie_big_nohaplotig	CDS	54008087	54008250	.	-	0	Parent=FBgn0000442.1.mrna1;Target=FBgn0000442.1 3892 4055 +
ChrX	stalkie_big_nohaplotig	CDS	54009257	54009708	.	-	2	Parent=FBgn0000442.1.mrna1;Target=FBgn0000442.1 3440 3891 +
ChrX	stalkie_big_nohaplotig	CDS	54009779	54010148	.	-	0	Parent=FBgn0000442.1.mrna1;Target=FBgn0000442.1 3070 3439 +
ChrX	stalkie_big_nohaplotig	CDS	54010220	54010670	.	-	1	Parent=FBgn0000442.1.mrna1;Target=FBgn0000442.1 2619 3069 +
ChrX	stalkie_big_nohaplotig	CDS	54010869	54011293	.	-	0	Parent=FBgn0000442.1.mrna1;Target=FBgn0000442.1 2194 2618 +
ChrX	stalkie_big_nohaplotig	CDS	54022134	54022571	.	-	0	Parent=FBgn0000442.1.mrna1;Target=FBgn0000442.1 1756 2193 +
ChrX	stalkie_big_nohaplotig	CDS	54028766	54030520	.	-	0	Parent=FBgn0000442.1.mrna1;Target=FBgn0000442.1 1 1755 +
ChrX	gffcl	locus	54084319	54086196	.	+	.	ID=RLOC_00003141;geneIDs=comp162407_c0_seq1.path1;transcripts=comp162407_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54084319	54086196	.	+	.	ID=comp162407_c0_seq1.mrna1;geneID=comp162407_c0_seq1.path1;Name=comp162407_c0_seq1;Dir=sensecoverage=98.3;identity=97.2;matches=1190;mismatches=31;indels=3;unknowns=0;Target=comp162407_c0_seq1 463 558 +;locus=RLOC_00003141
ChrX	stalkie_big_nohaplotig	exon	54084319	54084410	97	+	.	Parent=comp162407_c0_seq1.mrna1;Target=comp162407_c0_seq1 1 91 +
ChrX	stalkie_big_nohaplotig	exon	54084821	54084996	94	+	.	Parent=comp162407_c0_seq1.mrna1;Target=comp162407_c0_seq1 92 267 +
ChrX	stalkie_big_nohaplotig	exon	54085051	54085435	95	+	.	Parent=comp162407_c0_seq1.mrna1;Target=comp162407_c0_seq1 268 652 +
ChrX	stalkie_big_nohaplotig	exon	54085507	54085703	96	+	.	Parent=comp162407_c0_seq1.mrna1;Target=comp162407_c0_seq1 653 849 +
ChrX	stalkie_big_nohaplotig	exon	54085824	54086196	100	+	.	Parent=comp162407_c0_seq1.mrna1;Target=comp162407_c0_seq1 850 1222 +
ChrX	stalkie_big_nohaplotig	CDS	54085246	54085341	.	+	0	Parent=comp162407_c0_seq1.mrna1
ChrX	gffcl	locus	54092912	54093429	.	+	.	ID=RLOC_00003142;geneIDs=comp116093_c0_seq1.path1;transcripts=comp116093_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54092912	54093429	.	+	.	ID=comp116093_c0_seq1.mrna1;geneID=comp116093_c0_seq1.path1;Name=comp116093_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.0;matches=513;mismatches=3;indels=2;unknowns=0;Target=comp116093_c0_seq1 521 6 .;CDS_Target=comp116093_c0_seq1 494 351 .;locus=RLOC_00003142
ChrX	stalkie_big_nohaplotig	exon	54092912	54093429	99	+	.	Parent=comp116093_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	54093259	54093402	.	+	0	Parent=comp116093_c0_seq1.mrna1
ChrX	gffcl	locus	54129307	54132296	.	-	.	ID=RLOC_00003143;geneIDs=comp112786_c1_seq1.path1,comp157953_c0_seq1.path1;transcripts=comp112786_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54129307	54131361	.	-	.	ID=comp112786_c1_seq1.mrna1;geneID=comp112786_c1_seq1.path1;Name=comp112786_c1_seq1;Dir=sensecoverage=94.9;identity=100.0;matches=394;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003143
ChrX	stalkie_big_nohaplotig	exon	54129307	54129499	100	-	.	Parent=comp112786_c1_seq1.mrna1;Target=comp112786_c1_seq1 223 415 +
ChrX	stalkie_big_nohaplotig	exon	54131161	54131361	100	-	.	Parent=comp112786_c1_seq1.mrna1;Target=comp112786_c1_seq1 22 222 +
ChrX	stalkie_big_nohaplotig	CDS	54129394	54129499	.	-	1	Parent=comp112786_c1_seq1.mrna1;Target=comp112786_c1_seq1 223 328 +
ChrX	stalkie_big_nohaplotig	CDS	54131161	54131177	.	-	0	Parent=comp112786_c1_seq1.mrna1;Target=comp112786_c1_seq1 206 222 +
ChrX	gffcl	locus	54135811	54136327	.	.	.	ID=RLOC_00003144;geneIDs=comp72199_c0_seq1.path1,comp293745_c0_seq1.path1;transcripts=comp72199_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54136035	54136327	.	+	.	ID=comp72199_c0_seq1.mrna1;geneID=comp72199_c0_seq1.path1;Name=comp72199_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.7;matches=292;mismatches=1;indels=0;unknowns=0;Target=comp72199_c0_seq1 296 4 .;CDS_Target=comp72199_c0_seq1 107 6 .;locus=RLOC_00003144
ChrX	stalkie_big_nohaplotig	exon	54136035	54136327	99	+	.	Parent=comp72199_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	54136037	54136138	.	+	0	Parent=comp72199_c0_seq1.mrna1
ChrX	gffcl	locus	54136513	54136946	.	+	.	ID=RLOC_00003145;geneIDs=comp149273_c0_seq1.path1;transcripts=comp149273_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54136513	54136946	.	+	.	ID=comp149273_c0_seq1.mrna1;geneID=comp149273_c0_seq1.path1;Name=comp149273_c0_seq1;Dir=indeterminatecoverage=92.4;identity=99.5;matches=433;mismatches=1;indels=1;unknowns=0;Target=comp149273_c0_seq1 447 13 .;CDS_Target=comp149273_c0_seq1 86 15 .;locus=RLOC_00003145
ChrX	stalkie_big_nohaplotig	exon	54136513	54136946	99	+	.	Parent=comp149273_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	54136515	54136586	.	+	0	Parent=comp149273_c0_seq1.mrna1
ChrX	gffcl	locus	54220296	54222750	.	+	.	ID=RLOC_00003146;geneIDs=ORF1785.path1;transcripts=ORF1785.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54220296	54222750	.	+	.	ID=ORF1785.mrna1;geneID=ORF1785.path1;Name=ORF1785;Dir=sensecoverage=100.0;identity=98.9;matches=985;mismatches=11;indels=0;unknowns=0;locus=RLOC_00003146
ChrX	stalkie_big_nohaplotig	exon	54220296	54220546	97	+	.	Parent=ORF1785.mrna1;Target=ORF1785 1 251 +
ChrX	stalkie_big_nohaplotig	exon	54220610	54220725	100	+	.	Parent=ORF1785.mrna1;Target=ORF1785 252 367 +
ChrX	stalkie_big_nohaplotig	exon	54220820	54221226	99	+	.	Parent=ORF1785.mrna1;Target=ORF1785 368 774 +
ChrX	stalkie_big_nohaplotig	exon	54222467	54222649	98	+	.	Parent=ORF1785.mrna1;Target=ORF1785 775 957 +
ChrX	stalkie_big_nohaplotig	exon	54222712	54222750	100	+	.	Parent=ORF1785.mrna1;Target=ORF1785 958 996 +
ChrX	stalkie_big_nohaplotig	CDS	54220296	54220546	.	+	0	Parent=ORF1785.mrna1;Target=ORF1785 1 251 +
ChrX	stalkie_big_nohaplotig	CDS	54220610	54220725	.	+	1	Parent=ORF1785.mrna1;Target=ORF1785 252 367 +
ChrX	stalkie_big_nohaplotig	CDS	54220820	54221226	.	+	2	Parent=ORF1785.mrna1;Target=ORF1785 368 774 +
ChrX	stalkie_big_nohaplotig	CDS	54222467	54222649	.	+	0	Parent=ORF1785.mrna1;Target=ORF1785 775 957 +
ChrX	stalkie_big_nohaplotig	CDS	54222712	54222750	.	+	0	Parent=ORF1785.mrna1;Target=ORF1785 958 996 +
ChrX	gffcl	locus	54280902	54283399	.	+	.	ID=RLOC_00003147;geneIDs=ORF1841.path1;transcripts=ORF1841.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54280902	54283399	.	+	.	ID=ORF1841.mrna1;geneID=ORF1841.path1;Name=ORF1841;Dir=sensecoverage=99.8;identity=98.0;matches=962;mismatches=20;indels=0;unknowns=0;locus=RLOC_00003147
ChrX	stalkie_big_nohaplotig	exon	54280902	54281186	98	+	.	Parent=ORF1841.mrna1;Target=ORF1841 3 287 +
ChrX	stalkie_big_nohaplotig	exon	54281242	54281339	98	+	.	Parent=ORF1841.mrna1;Target=ORF1841 288 385 +
ChrX	stalkie_big_nohaplotig	exon	54281412	54281767	95	+	.	Parent=ORF1841.mrna1;Target=ORF1841 386 741 +
ChrX	stalkie_big_nohaplotig	exon	54283094	54283279	100	+	.	Parent=ORF1841.mrna1;Target=ORF1841 742 927 +
ChrX	stalkie_big_nohaplotig	exon	54283343	54283399	98	+	.	Parent=ORF1841.mrna1;Target=ORF1841 928 984 +
ChrX	stalkie_big_nohaplotig	CDS	54280903	54281186	.	+	0	Parent=ORF1841.mrna1;Target=ORF1841 4 287 +
ChrX	stalkie_big_nohaplotig	CDS	54281242	54281339	.	+	1	Parent=ORF1841.mrna1;Target=ORF1841 288 385 +
ChrX	stalkie_big_nohaplotig	CDS	54281412	54281767	.	+	2	Parent=ORF1841.mrna1;Target=ORF1841 386 741 +
ChrX	stalkie_big_nohaplotig	CDS	54283094	54283279	.	+	0	Parent=ORF1841.mrna1;Target=ORF1841 742 927 +
ChrX	stalkie_big_nohaplotig	CDS	54283343	54283399	.	+	0	Parent=ORF1841.mrna1;Target=ORF1841 928 984 +
ChrX	gffcl	locus	54479115	54485015	.	+	.	ID=RLOC_00003148;geneIDs=comp152145_c0_seq1.path1;transcripts=comp152145_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54479115	54485015	.	+	.	ID=comp152145_c0_seq1.mrna1;geneID=comp152145_c0_seq1.path1;Name=comp152145_c0_seq1;Dir=sensecoverage=98.7;identity=98.9;matches=992;mismatches=11;indels=0;unknowns=0;locus=RLOC_00003148
ChrX	stalkie_big_nohaplotig	exon	54479115	54479316	98	+	.	Parent=comp152145_c0_seq1.mrna1;Target=comp152145_c0_seq1 14 215 +
ChrX	stalkie_big_nohaplotig	exon	54479723	54479785	100	+	.	Parent=comp152145_c0_seq1.mrna1;Target=comp152145_c0_seq1 216 278 +
ChrX	stalkie_big_nohaplotig	exon	54483933	54484160	98	+	.	Parent=comp152145_c0_seq1.mrna1;Target=comp152145_c0_seq1 279 506 +
ChrX	stalkie_big_nohaplotig	exon	54484506	54485015	99	+	.	Parent=comp152145_c0_seq1.mrna1;Target=comp152145_c0_seq1 507 1016 +
ChrX	stalkie_big_nohaplotig	CDS	54479259	54479316	.	+	0	Parent=comp152145_c0_seq1.mrna1;Target=comp152145_c0_seq1 158 215 +
ChrX	stalkie_big_nohaplotig	CDS	54479723	54479785	.	+	2	Parent=comp152145_c0_seq1.mrna1;Target=comp152145_c0_seq1 216 278 +
ChrX	stalkie_big_nohaplotig	CDS	54483933	54484160	.	+	2	Parent=comp152145_c0_seq1.mrna1;Target=comp152145_c0_seq1 279 506 +
ChrX	stalkie_big_nohaplotig	CDS	54484506	54484531	.	+	2	Parent=comp152145_c0_seq1.mrna1;Target=comp152145_c0_seq1 507 532 +
ChrX	stalkie_big_nohaplotig	mRNA	54530025	54534240	.	-	.	ID=FBgn0028519.1.mrna1;geneID=FBgn0028519.1.path1;Name=FBgn0028519.1;Dir=sensecoverage=100.0;identity=100.0;matches=2100;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003149
ChrX	stalkie_big_nohaplotig	exon	54530025	54530095	100	-	.	Parent=FBgn0028519.1.mrna1;Target=FBgn0028519.1 2030 2100 +
ChrX	stalkie_big_nohaplotig	exon	54530198	54530489	100	-	.	Parent=FBgn0028519.1.mrna1;Target=FBgn0028519.1 1738 2029 +
ChrX	stalkie_big_nohaplotig	exon	54530555	54530845	100	-	.	Parent=FBgn0028519.1.mrna1;Target=FBgn0028519.1 1447 1737 +
ChrX	stalkie_big_nohaplotig	exon	54532595	54532889	100	-	.	Parent=FBgn0028519.1.mrna1;Target=FBgn0028519.1 1152 1446 +
ChrX	stalkie_big_nohaplotig	exon	54532945	54533345	100	-	.	Parent=FBgn0028519.1.mrna1;Target=FBgn0028519.1 751 1151 +
ChrX	stalkie_big_nohaplotig	exon	54533491	54534240	100	-	.	Parent=FBgn0028519.1.mrna1;Target=FBgn0028519.1 1 750 +
ChrX	stalkie_big_nohaplotig	CDS	54530025	54530095	.	-	2	Parent=FBgn0028519.1.mrna1;Target=FBgn0028519.1 2030 2100 +
ChrX	stalkie_big_nohaplotig	CDS	54530198	54530489	.	-	0	Parent=FBgn0028519.1.mrna1;Target=FBgn0028519.1 1738 2029 +
ChrX	stalkie_big_nohaplotig	CDS	54530555	54530845	.	-	0	Parent=FBgn0028519.1.mrna1;Target=FBgn0028519.1 1447 1737 +
ChrX	stalkie_big_nohaplotig	CDS	54532595	54532889	.	-	1	Parent=FBgn0028519.1.mrna1;Target=FBgn0028519.1 1152 1446 +
ChrX	stalkie_big_nohaplotig	CDS	54532945	54533345	.	-	0	Parent=FBgn0028519.1.mrna1;Target=FBgn0028519.1 751 1151 +
ChrX	stalkie_big_nohaplotig	CDS	54533491	54534240	.	-	0	Parent=FBgn0028519.1.mrna1;Target=FBgn0028519.1 1 750 +
ChrX	stalkie_big_nohaplotig	mRNA	54530825	54532213	.	-	.	ID=comp156908_c0_seq1.mrna1;geneID=comp156908_c0_seq1.path1;Name=comp156908_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1389;mismatches=0;indels=0;unknowns=0;Target=comp156908_c0_seq1 1389 1 .;CDS_Target=comp156908_c0_seq1 770 507 .;locus=RLOC_00003149
ChrX	stalkie_big_nohaplotig	exon	54530825	54532213	100	-	.	Parent=comp156908_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	54531444	54531707	.	-	0	Parent=comp156908_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54546504	54547334	.	+	.	ID=comp158046_c0_seq1.mrna2;geneID=comp158046_c0_seq1.path2;Name=comp158046_c0_seq1;Dir=antisensecoverage=99.4;identity=95.5;matches=749;mismatches=23;indels=12;unknowns=0;Target=comp158046_c0_seq1 77 346 .;locus=RLOC_00003149
ChrX	stalkie_big_nohaplotig	exon	54546504	54546939	95	+	.	Parent=comp158046_c0_seq1.mrna2;Target=comp158046_c0_seq1 349 787 -
ChrX	stalkie_big_nohaplotig	exon	54546999	54547334	95	+	.	Parent=comp158046_c0_seq1.mrna2;Target=comp158046_c0_seq1 4 348 -
ChrX	stalkie_big_nohaplotig	CDS	54547001	54547261	.	+	0	Parent=comp158046_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	54699131	54699612	.	-	.	ID=comp1096495_c0_seq1.mrna1;geneID=comp1096495_c0_seq1.path1;Name=comp1096495_c0_seq1;Dir=indeterminatecoverage=96.2;identity=90.5;matches=477;mismatches=5;indels=45;unknowns=0;Target=comp1096495_c0_seq1 527 1 .;CDS_Target=comp1096495_c0_seq1 244 197 .;locus=RLOC_00003149
ChrX	stalkie_big_nohaplotig	exon	54699131	54699612	90	-	.	Parent=comp1096495_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	54699369	54699416	.	-	0	Parent=comp1096495_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56092368	56095119	.	+	.	ID=FBgn0028534.1.mrna1;geneID=FBgn0028534.1.path1;Name=FBgn0028534.1;Dir=sensecoverage=100.0;identity=100.0;matches=837;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003149
ChrX	stalkie_big_nohaplotig	exon	56092368	56092476	100	+	.	Parent=FBgn0028534.1.mrna1;Target=FBgn0028534.1 1 109 +
ChrX	stalkie_big_nohaplotig	exon	56094320	56094485	100	+	.	Parent=FBgn0028534.1.mrna1;Target=FBgn0028534.1 110 275 +
ChrX	stalkie_big_nohaplotig	exon	56094558	56095119	100	+	.	Parent=FBgn0028534.1.mrna1;Target=FBgn0028534.1 276 837 +
ChrX	stalkie_big_nohaplotig	CDS	56092368	56092476	.	+	0	Parent=FBgn0028534.1.mrna1;Target=FBgn0028534.1 1 109 +
ChrX	stalkie_big_nohaplotig	CDS	56094320	56094485	.	+	2	Parent=FBgn0028534.1.mrna1;Target=FBgn0028534.1 110 275 +
ChrX	stalkie_big_nohaplotig	CDS	56094558	56095119	.	+	1	Parent=FBgn0028534.1.mrna1;Target=FBgn0028534.1 276 837 +
ChrX	gffcl	locus	54510525	54529861	.	+	.	ID=RLOC_00003151;geneIDs=FBgn0028872.1.path1;transcripts=FBgn0028872.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54510525	54529861	.	+	.	ID=FBgn0028872.1.mrna1;geneID=FBgn0028872.1.path1;Name=FBgn0028872.1;Dir=sensecoverage=100.0;identity=99.7;matches=1855;mismatches=5;indels=0;unknowns=0;locus=RLOC_00003151
ChrX	stalkie_big_nohaplotig	exon	54510525	54511490	99	+	.	Parent=FBgn0028872.1.mrna1;Target=FBgn0028872.1 1 966 +
ChrX	stalkie_big_nohaplotig	exon	54525620	54526210	99	+	.	Parent=FBgn0028872.1.mrna1;Target=FBgn0028872.1 967 1557 +
ChrX	stalkie_big_nohaplotig	exon	54526301	54526495	99	+	.	Parent=FBgn0028872.1.mrna1;Target=FBgn0028872.1 1558 1752 +
ChrX	stalkie_big_nohaplotig	exon	54529754	54529861	99	+	.	Parent=FBgn0028872.1.mrna1;Target=FBgn0028872.1 1753 1860 +
ChrX	stalkie_big_nohaplotig	CDS	54510525	54511490	.	+	0	Parent=FBgn0028872.1.mrna1;Target=FBgn0028872.1 1 966 +
ChrX	stalkie_big_nohaplotig	CDS	54525620	54526210	.	+	0	Parent=FBgn0028872.1.mrna1;Target=FBgn0028872.1 967 1557 +
ChrX	stalkie_big_nohaplotig	CDS	54526301	54526495	.	+	0	Parent=FBgn0028872.1.mrna1;Target=FBgn0028872.1 1558 1752 +
ChrX	stalkie_big_nohaplotig	CDS	54529754	54529861	.	+	0	Parent=FBgn0028872.1.mrna1;Target=FBgn0028872.1 1753 1860 +
ChrX	gffcl	locus	54573510	54574379	.	-	.	ID=RLOC_00003153;geneIDs=FBgn0051245.1.path1;transcripts=FBgn0051245.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54573510	54574379	.	-	.	ID=FBgn0051245.1.mrna1;geneID=FBgn0051245.1.path1;Name=FBgn0051245.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=868;mismatches=2;indels=0;unknowns=0;Target=FBgn0051245.1 870 1 .;locus=RLOC_00003153
ChrX	stalkie_big_nohaplotig	exon	54573510	54574379	99	-	.	Parent=FBgn0051245.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	54573510	54574379	.	-	0	Parent=FBgn0051245.1.mrna1
ChrX	gffcl	locus	54578372	54579241	.	+	.	ID=RLOC_00003154;geneIDs=FBgn0051245.1.path2;transcripts=FBgn0051245.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	54578372	54579241	.	+	.	ID=FBgn0051245.1.mrna2;geneID=FBgn0051245.1.path2;Name=FBgn0051245.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=868;mismatches=2;indels=0;unknowns=0;Target=FBgn0051245.1 870 1 .;locus=RLOC_00003154
ChrX	stalkie_big_nohaplotig	exon	54578372	54579241	99	+	.	Parent=FBgn0051245.1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	54578372	54579241	.	+	0	Parent=FBgn0051245.1.mrna2
ChrX	gffcl	locus	54582351	54596196	.	-	.	ID=RLOC_00003155;geneIDs=FBgn0027348.1.path1;transcripts=FBgn0027348.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54582351	54596196	.	-	.	ID=FBgn0027348.1.mrna1;geneID=FBgn0027348.1.path1;Name=FBgn0027348.1;Dir=sensecoverage=100.0;identity=99.8;matches=2011;mismatches=5;indels=0;unknowns=0;locus=RLOC_00003155
ChrX	stalkie_big_nohaplotig	exon	54582351	54582421	100	-	.	Parent=FBgn0027348.1.mrna1;Target=FBgn0027348.1 1946 2016 +
ChrX	stalkie_big_nohaplotig	exon	54582482	54582731	100	-	.	Parent=FBgn0027348.1.mrna1;Target=FBgn0027348.1 1696 1945 +
ChrX	stalkie_big_nohaplotig	exon	54584448	54584738	100	-	.	Parent=FBgn0027348.1.mrna1;Target=FBgn0027348.1 1405 1695 +
ChrX	stalkie_big_nohaplotig	exon	54584858	54585158	99	-	.	Parent=FBgn0027348.1.mrna1;Target=FBgn0027348.1 1104 1404 +
ChrX	stalkie_big_nohaplotig	exon	54590165	54590562	98	-	.	Parent=FBgn0027348.1.mrna1;Target=FBgn0027348.1 706 1103 +
ChrX	stalkie_big_nohaplotig	exon	54592249	54592350	100	-	.	Parent=FBgn0027348.1.mrna1;Target=FBgn0027348.1 604 705 +
ChrX	stalkie_big_nohaplotig	exon	54592856	54593201	100	-	.	Parent=FBgn0027348.1.mrna1;Target=FBgn0027348.1 258 603 +
ChrX	stalkie_big_nohaplotig	exon	54595940	54596196	100	-	.	Parent=FBgn0027348.1.mrna1;Target=FBgn0027348.1 1 257 +
ChrX	stalkie_big_nohaplotig	CDS	54582351	54582421	.	-	2	Parent=FBgn0027348.1.mrna1;Target=FBgn0027348.1 1946 2016 +
ChrX	stalkie_big_nohaplotig	CDS	54582482	54582731	.	-	0	Parent=FBgn0027348.1.mrna1;Target=FBgn0027348.1 1696 1945 +
ChrX	stalkie_big_nohaplotig	CDS	54584448	54584738	.	-	0	Parent=FBgn0027348.1.mrna1;Target=FBgn0027348.1 1405 1695 +
ChrX	stalkie_big_nohaplotig	CDS	54584858	54585158	.	-	1	Parent=FBgn0027348.1.mrna1;Target=FBgn0027348.1 1104 1404 +
ChrX	stalkie_big_nohaplotig	CDS	54590165	54590562	.	-	0	Parent=FBgn0027348.1.mrna1;Target=FBgn0027348.1 706 1103 +
ChrX	stalkie_big_nohaplotig	CDS	54592249	54592350	.	-	0	Parent=FBgn0027348.1.mrna1;Target=FBgn0027348.1 604 705 +
ChrX	stalkie_big_nohaplotig	CDS	54592856	54593201	.	-	1	Parent=FBgn0027348.1.mrna1;Target=FBgn0027348.1 258 603 +
ChrX	stalkie_big_nohaplotig	CDS	54595940	54596196	.	-	0	Parent=FBgn0027348.1.mrna1;Target=FBgn0027348.1 1 257 +
ChrX	gffcl	locus	54615072	54622358	.	+	.	ID=RLOC_00003156;geneIDs=comp160471_c0_seq1.path1;transcripts=comp160471_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54615072	54622358	.	+	.	ID=comp160471_c0_seq1.mrna1;geneID=comp160471_c0_seq1.path1;Name=comp160471_c0_seq1;Dir=sensecoverage=98.2;identity=99.0;matches=1570;mismatches=16;indels=0;unknowns=0;locus=RLOC_00003156
ChrX	stalkie_big_nohaplotig	exon	54615072	54615152	97	+	.	Parent=comp160471_c0_seq1.mrna1;Target=comp160471_c0_seq1 30 110 +
ChrX	stalkie_big_nohaplotig	exon	54620721	54620825	100	+	.	Parent=comp160471_c0_seq1.mrna1;Target=comp160471_c0_seq1 111 215 +
ChrX	stalkie_big_nohaplotig	exon	54620893	54621618	99	+	.	Parent=comp160471_c0_seq1.mrna1;Target=comp160471_c0_seq1 216 941 +
ChrX	stalkie_big_nohaplotig	exon	54621685	54622358	98	+	.	Parent=comp160471_c0_seq1.mrna1;Target=comp160471_c0_seq1 942 1615 +
ChrX	stalkie_big_nohaplotig	CDS	54620753	54620825	.	+	0	Parent=comp160471_c0_seq1.mrna1;Target=comp160471_c0_seq1 143 215 +
ChrX	stalkie_big_nohaplotig	CDS	54620893	54621618	.	+	2	Parent=comp160471_c0_seq1.mrna1;Target=comp160471_c0_seq1 216 941 +
ChrX	stalkie_big_nohaplotig	CDS	54621685	54622349	.	+	2	Parent=comp160471_c0_seq1.mrna1;Target=comp160471_c0_seq1 942 1606 +
ChrX	gffcl	locus	54645255	54646223	.	+	.	ID=RLOC_00003157;geneIDs=FBgn0031607.1.path1;transcripts=FBgn0031607.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54645255	54646223	.	+	.	ID=FBgn0031607.1.mrna1;geneID=FBgn0031607.1.path1;Name=FBgn0031607.1;Dir=sensecoverage=100.0;identity=99.8;matches=910;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003157
ChrX	stalkie_big_nohaplotig	exon	54645255	54645314	100	+	.	Parent=FBgn0031607.1.mrna1;Target=FBgn0031607.1 1 60 +
ChrX	stalkie_big_nohaplotig	exon	54645372	54646223	99	+	.	Parent=FBgn0031607.1.mrna1;Target=FBgn0031607.1 61 912 +
ChrX	stalkie_big_nohaplotig	CDS	54645255	54645314	.	+	0	Parent=FBgn0031607.1.mrna1;Target=FBgn0031607.1 1 60 +
ChrX	stalkie_big_nohaplotig	CDS	54645372	54646223	.	+	0	Parent=FBgn0031607.1.mrna1;Target=FBgn0031607.1 61 912 +
ChrX	gffcl	locus	54650799	54651590	.	+	.	ID=RLOC_00003158;geneIDs=FBgn0031607.3.path1;transcripts=FBgn0031607.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54650799	54651590	.	+	.	ID=FBgn0031607.3.mrna1;geneID=FBgn0031607.3.path1;Name=FBgn0031607.3;Dir=indeterminatecoverage=100.0;identity=99.7;matches=790;mismatches=2;indels=0;unknowns=0;Target=FBgn0031607.3 792 1 .;locus=RLOC_00003158
ChrX	stalkie_big_nohaplotig	exon	54650799	54651590	99	+	.	Parent=FBgn0031607.3.mrna1
ChrX	stalkie_big_nohaplotig	CDS	54650799	54651590	.	+	0	Parent=FBgn0031607.3.mrna1
ChrX	gffcl	locus	54678365	54679903	.	-	.	ID=RLOC_00003159;geneIDs=ORF946.path1;transcripts=ORF946.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54678365	54679903	.	-	.	ID=ORF946.mrna1;geneID=ORF946.path1;Name=ORF946;Dir=sensecoverage=100.0;identity=99.9;matches=1331;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003159
ChrX	stalkie_big_nohaplotig	exon	54678365	54678642	100	-	.	Parent=ORF946.mrna1;Target=ORF946 1055 1332 +
ChrX	stalkie_big_nohaplotig	exon	54678729	54678773	100	-	.	Parent=ORF946.mrna1;Target=ORF946 1010 1054 +
ChrX	stalkie_big_nohaplotig	exon	54678832	54679485	100	-	.	Parent=ORF946.mrna1;Target=ORF946 356 1009 +
ChrX	stalkie_big_nohaplotig	exon	54679549	54679903	99	-	.	Parent=ORF946.mrna1;Target=ORF946 1 355 +
ChrX	stalkie_big_nohaplotig	CDS	54678365	54678642	.	-	2	Parent=ORF946.mrna1;Target=ORF946 1055 1332 +
ChrX	stalkie_big_nohaplotig	CDS	54678729	54678773	.	-	2	Parent=ORF946.mrna1;Target=ORF946 1010 1054 +
ChrX	stalkie_big_nohaplotig	CDS	54678832	54679485	.	-	2	Parent=ORF946.mrna1;Target=ORF946 356 1009 +
ChrX	stalkie_big_nohaplotig	CDS	54679549	54679903	.	-	0	Parent=ORF946.mrna1;Target=ORF946 1 355 +
ChrX	gffcl	locus	54680084	54680600	.	-	.	ID=RLOC_00003160;geneIDs=comp133925_c0_seq1.path1;transcripts=comp133925_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54680084	54680600	.	-	.	ID=comp133925_c0_seq1.mrna1;geneID=comp133925_c0_seq1.path1;Name=comp133925_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=517;mismatches=0;indels=0;unknowns=0;Target=comp133925_c0_seq1 517 1 .;CDS_Target=comp133925_c0_seq1 103 2 .;locus=RLOC_00003160
ChrX	stalkie_big_nohaplotig	exon	54680084	54680600	100	-	.	Parent=comp133925_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	54680498	54680599	.	-	0	Parent=comp133925_c0_seq1.mrna1
ChrX	gffcl	locus	54705940	54707482	.	-	.	ID=RLOC_00003161;geneIDs=ORF944.path1;transcripts=ORF944.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54705940	54707482	.	-	.	ID=ORF944.mrna1;geneID=ORF944.path1;Name=ORF944;Dir=sensecoverage=100.0;identity=98.7;matches=1317;mismatches=18;indels=0;unknowns=0;locus=RLOC_00003161
ChrX	stalkie_big_nohaplotig	exon	54705940	54706103	97	-	.	Parent=ORF944.mrna1;Target=ORF944 1172 1335 +
ChrX	stalkie_big_nohaplotig	exon	54706190	54706234	97	-	.	Parent=ORF944.mrna1;Target=ORF944 1127 1171 +
ChrX	stalkie_big_nohaplotig	exon	54706293	54706961	98	-	.	Parent=ORF944.mrna1;Target=ORF944 458 1126 +
ChrX	stalkie_big_nohaplotig	exon	54707026	54707482	99	-	.	Parent=ORF944.mrna1;Target=ORF944 1 457 +
ChrX	stalkie_big_nohaplotig	CDS	54705940	54706103	.	-	2	Parent=ORF944.mrna1;Target=ORF944 1172 1335 +
ChrX	stalkie_big_nohaplotig	CDS	54706190	54706234	.	-	2	Parent=ORF944.mrna1;Target=ORF944 1127 1171 +
ChrX	stalkie_big_nohaplotig	CDS	54706293	54706961	.	-	2	Parent=ORF944.mrna1;Target=ORF944 458 1126 +
ChrX	stalkie_big_nohaplotig	CDS	54707026	54707482	.	-	0	Parent=ORF944.mrna1;Target=ORF944 1 457 +
ChrX	gffcl	locus	54712689	54717570	.	-	.	ID=RLOC_00003162;geneIDs=comp152656_c0_seq1.path1;transcripts=comp152656_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54712689	54717570	.	-	.	ID=comp152656_c0_seq1.mrna1;geneID=comp152656_c0_seq1.path1;Name=comp152656_c0_seq1;Dir=sensecoverage=97.3;identity=93.3;matches=614;mismatches=16;indels=28;unknowns=0;Target=comp152656_c0_seq1 314 442 +;locus=RLOC_00003162
ChrX	stalkie_big_nohaplotig	exon	54712689	54713108	89	-	.	Parent=comp152656_c0_seq1.mrna1;Target=comp152656_c0_seq1 248 657 +
ChrX	stalkie_big_nohaplotig	exon	54717342	54717570	100	-	.	Parent=comp152656_c0_seq1.mrna1;Target=comp152656_c0_seq1 19 247 +
ChrX	stalkie_big_nohaplotig	CDS	54712914	54713042	.	-	0	Parent=comp152656_c0_seq1.mrna1
ChrX	gffcl	locus	54733771	54735379	.	-	.	ID=RLOC_00003163;geneIDs=ORF2231.path3;transcripts=ORF2231.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	54733771	54735379	.	-	.	ID=ORF2231.mrna3;geneID=ORF2231.path3;Name=ORF2231;Dir=sensecoverage=99.9;identity=98.4;matches=879;mismatches=14;indels=0;unknowns=0;locus=RLOC_00003163
ChrX	stalkie_big_nohaplotig	exon	54733771	54734005	100	-	.	Parent=ORF2231.mrna3;Target=ORF2231 659 893 +
ChrX	stalkie_big_nohaplotig	exon	54734128	54734212	98	-	.	Parent=ORF2231.mrna3;Target=ORF2231 574 658 +
ChrX	stalkie_big_nohaplotig	exon	54734294	54734477	98	-	.	Parent=ORF2231.mrna3;Target=ORF2231 390 573 +
ChrX	stalkie_big_nohaplotig	exon	54734655	54734703	97	-	.	Parent=ORF2231.mrna3;Target=ORF2231 341 389 +
ChrX	stalkie_big_nohaplotig	exon	54735040	54735379	97	-	.	Parent=ORF2231.mrna3;Target=ORF2231 1 340 +
ChrX	stalkie_big_nohaplotig	CDS	54733773	54734005	.	-	2	Parent=ORF2231.mrna3;Target=ORF2231 659 891 +
ChrX	stalkie_big_nohaplotig	CDS	54734128	54734212	.	-	0	Parent=ORF2231.mrna3;Target=ORF2231 574 658 +
ChrX	stalkie_big_nohaplotig	CDS	54734294	54734477	.	-	1	Parent=ORF2231.mrna3;Target=ORF2231 390 573 +
ChrX	stalkie_big_nohaplotig	CDS	54734655	54734703	.	-	2	Parent=ORF2231.mrna3;Target=ORF2231 341 389 +
ChrX	stalkie_big_nohaplotig	CDS	54735040	54735379	.	-	0	Parent=ORF2231.mrna3;Target=ORF2231 1 340 +
ChrX	gffcl	locus	54740949	54741782	.	-	.	ID=RLOC_00003164;geneIDs=comp158046_c0_seq1.path1;transcripts=comp158046_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54740949	54741782	.	-	.	ID=comp158046_c0_seq1.mrna1;geneID=comp158046_c0_seq1.path1;Name=comp158046_c0_seq1;Dir=antisensecoverage=99.4;identity=95.5;matches=749;mismatches=26;indels=9;unknowns=0;Target=comp158046_c0_seq1 77 346 .;locus=RLOC_00003164
ChrX	stalkie_big_nohaplotig	exon	54740949	54741284	95	-	.	Parent=comp158046_c0_seq1.mrna1;Target=comp158046_c0_seq1 4 348 -
ChrX	stalkie_big_nohaplotig	exon	54741344	54741782	95	-	.	Parent=comp158046_c0_seq1.mrna1;Target=comp158046_c0_seq1 349 787 -
ChrX	stalkie_big_nohaplotig	CDS	54741022	54741282	.	-	0	Parent=comp158046_c0_seq1.mrna1
ChrX	gffcl	locus	54775452	54776725	.	+	.	ID=RLOC_00003165;geneIDs=ORF2231.path1;transcripts=ORF2231.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54775452	54776725	.	+	.	ID=ORF2231.mrna1;geneID=ORF2231.path1;Name=ORF2231;Dir=sensecoverage=100.0;identity=98.9;matches=884;mismatches=10;indels=0;unknowns=0;locus=RLOC_00003165
ChrX	stalkie_big_nohaplotig	exon	54775452	54775800	98	+	.	Parent=ORF2231.mrna1;Target=ORF2231 1 349 +
ChrX	stalkie_big_nohaplotig	exon	54775978	54776201	98	+	.	Parent=ORF2231.mrna1;Target=ORF2231 350 573 +
ChrX	stalkie_big_nohaplotig	exon	54776283	54776367	98	+	.	Parent=ORF2231.mrna1;Target=ORF2231 574 658 +
ChrX	stalkie_big_nohaplotig	exon	54776490	54776725	99	+	.	Parent=ORF2231.mrna1;Target=ORF2231 659 894 +
ChrX	stalkie_big_nohaplotig	CDS	54775452	54775800	.	+	0	Parent=ORF2231.mrna1;Target=ORF2231 1 349 +
ChrX	stalkie_big_nohaplotig	CDS	54775978	54776201	.	+	2	Parent=ORF2231.mrna1;Target=ORF2231 350 573 +
ChrX	stalkie_big_nohaplotig	CDS	54776283	54776367	.	+	0	Parent=ORF2231.mrna1;Target=ORF2231 574 658 +
ChrX	stalkie_big_nohaplotig	CDS	54776490	54776725	.	+	2	Parent=ORF2231.mrna1;Target=ORF2231 659 894 +
ChrX	gffcl	locus	54798927	54801455	.	-	.	ID=RLOC_00003166;geneIDs=comp153122_c1_seq1.path1;transcripts=comp153122_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54798927	54801455	.	-	.	ID=comp153122_c1_seq1.mrna1;geneID=comp153122_c1_seq1.path1;Name=comp153122_c1_seq1;Dir=indeterminatecoverage=100.0;identity=95.6;matches=918;mismatches=18;indels=24;unknowns=0;locus=RLOC_00003166
ChrX	stalkie_big_nohaplotig	exon	54798927	54799170	97	-	.	Parent=comp153122_c1_seq1.mrna1;Target=comp153122_c1_seq1 1006 764 .
ChrX	stalkie_big_nohaplotig	exon	54799270	54799668	94	-	.	Parent=comp153122_c1_seq1.mrna1;Target=comp153122_c1_seq1 763 348 .
ChrX	stalkie_big_nohaplotig	exon	54799674	54799807	97	-	.	Parent=comp153122_c1_seq1.mrna1;Target=comp153122_c1_seq1 294 161 .
ChrX	stalkie_big_nohaplotig	exon	54799873	54799979	90	-	.	Parent=comp153122_c1_seq1.mrna1;Target=comp153122_c1_seq1 160 60 .
ChrX	stalkie_big_nohaplotig	exon	54801397	54801455	98	-	.	Parent=comp153122_c1_seq1.mrna1;Target=comp153122_c1_seq1 59 1 .
ChrX	stalkie_big_nohaplotig	CDS	54799921	54799979	.	-	2	Parent=comp153122_c1_seq1.mrna1;Target=comp153122_c1_seq1 112 60 .
ChrX	stalkie_big_nohaplotig	CDS	54801397	54801454	.	-	0	Parent=comp153122_c1_seq1.mrna1;Target=comp153122_c1_seq1 59 2 .
ChrX	gffcl	locus	54825394	54825662	.	-	.	ID=RLOC_00003167;geneIDs=comp88479_c0_seq1.path1;transcripts=comp88479_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54825394	54825662	.	-	.	ID=comp88479_c0_seq1.mrna1;geneID=comp88479_c0_seq1.path1;Name=comp88479_c0_seq1;Dir=indeterminatecoverage=92.2;identity=97.4;matches=263;mismatches=6;indels=1;unknowns=0;Target=comp88479_c0_seq1 293 24 .;CDS_Target=comp88479_c0_seq1 293 240 .;locus=RLOC_00003167
ChrX	stalkie_big_nohaplotig	exon	54825394	54825662	97	-	.	Parent=comp88479_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	54825394	54825447	.	-	0	Parent=comp88479_c0_seq1.mrna1
ChrX	gffcl	locus	54825752	54826550	.	-	.	ID=RLOC_00003168;geneIDs=comp157081_c0_seq1.path1;transcripts=comp157081_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54825752	54826550	.	-	.	ID=comp157081_c0_seq1.mrna1;geneID=comp157081_c0_seq1.path1;Name=comp157081_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.6;matches=798;mismatches=1;indels=2;unknowns=0;Target=comp157081_c0_seq1 809 9 .;CDS_Target=comp157081_c0_seq1 482 138 .;locus=RLOC_00003168
ChrX	stalkie_big_nohaplotig	exon	54825752	54826550	99	-	.	Parent=comp157081_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	54826078	54826422	.	-	0	Parent=comp157081_c0_seq1.mrna1
ChrX	gffcl	locus	54826703	54827464	.	+	.	ID=RLOC_00003169;geneIDs=comp153531_c1_seq1.path1;transcripts=comp153531_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54826703	54827464	.	+	.	ID=comp153531_c1_seq1.mrna1;geneID=comp153531_c1_seq1.path1;Name=comp153531_c1_seq1;Dir=indeterminatecoverage=99.7;identity=99.9;matches=761;mismatches=1;indels=0;unknowns=0;Target=comp153531_c1_seq1 762 1 .;CDS_Target=comp153531_c1_seq1 760 410 .;locus=RLOC_00003169
ChrX	stalkie_big_nohaplotig	exon	54826703	54827464	99	+	.	Parent=comp153531_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	54827112	54827462	.	+	0	Parent=comp153531_c1_seq1.mrna1
ChrX	gffcl	locus	54831668	54832077	.	+	.	ID=RLOC_00003170;geneIDs=comp140291_c0_seq1.path1;transcripts=comp140291_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54831668	54832077	.	+	.	ID=comp140291_c0_seq1.mrna1;geneID=comp140291_c0_seq1.path1;Name=comp140291_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=405;mismatches=5;indels=0;unknowns=0;Target=comp140291_c0_seq1 410 1 .;CDS_Target=comp140291_c0_seq1 211 86 .;locus=RLOC_00003170
ChrX	stalkie_big_nohaplotig	exon	54831668	54832077	98	+	.	Parent=comp140291_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	54831753	54831878	.	+	0	Parent=comp140291_c0_seq1.mrna1
ChrX	gffcl	locus	54832090	54832499	.	+	.	ID=RLOC_00003171;geneIDs=comp140291_c0_seq1.path2;transcripts=comp140291_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	54832090	54832499	.	+	.	ID=comp140291_c0_seq1.mrna2;geneID=comp140291_c0_seq1.path2;Name=comp140291_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=405;mismatches=5;indels=0;unknowns=0;Target=comp140291_c0_seq1 410 1 .;CDS_Target=comp140291_c0_seq1 211 86 .;locus=RLOC_00003171
ChrX	stalkie_big_nohaplotig	exon	54832090	54832499	98	+	.	Parent=comp140291_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	54832175	54832300	.	+	0	Parent=comp140291_c0_seq1.mrna2
ChrX	gffcl	locus	54833974	54834879	.	-	.	ID=RLOC_00003172;geneIDs=comp155986_c0_seq1.path1;transcripts=comp155986_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54833974	54834879	.	-	.	ID=comp155986_c0_seq1.mrna1;geneID=comp155986_c0_seq1.path1;Name=comp155986_c0_seq1;Dir=antisensecoverage=98.2;identity=96.5;matches=779;mismatches=20;indels=8;unknowns=0;locus=RLOC_00003172
ChrX	stalkie_big_nohaplotig	exon	54833974	54834474	95	-	.	Parent=comp155986_c0_seq1.mrna1;Target=comp155986_c0_seq1 16 524 -
ChrX	stalkie_big_nohaplotig	exon	54834582	54834879	98	-	.	Parent=comp155986_c0_seq1.mrna1;Target=comp155986_c0_seq1 525 822 -
ChrX	stalkie_big_nohaplotig	CDS	54834344	54834474	.	-	2	Parent=comp155986_c0_seq1.mrna1;Target=comp155986_c0_seq1 394 524 .
ChrX	stalkie_big_nohaplotig	CDS	54834582	54834594	.	-	0	Parent=comp155986_c0_seq1.mrna1;Target=comp155986_c0_seq1 525 537 .
ChrX	gffcl	locus	54852283	54853336	.	+	.	ID=RLOC_00003173;geneIDs=comp147077_c0_seq1.path1;transcripts=comp147077_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54852283	54853336	.	+	.	ID=comp147077_c0_seq1.mrna1;geneID=comp147077_c0_seq1.path1;Name=comp147077_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.3;matches=1047;mismatches=7;indels=0;unknowns=0;Target=comp147077_c0_seq1 1071 18 .;CDS_Target=comp147077_c0_seq1 768 415 .;locus=RLOC_00003173
ChrX	stalkie_big_nohaplotig	exon	54852283	54853336	99	+	.	Parent=comp147077_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	54852680	54853033	.	+	0	Parent=comp147077_c0_seq1.mrna1
ChrX	gffcl	locus	54885052	55207261	.	+	.	ID=RLOC_00003176;geneIDs=comp149822_c2_seq1.path1;transcripts=comp149822_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54885052	55207261	.	+	.	ID=comp149822_c2_seq1.mrna1;geneID=comp149822_c2_seq1.path1;Name=comp149822_c2_seq1;Dir=antisensecoverage=79.8;identity=95.9;matches=351;mismatches=11;indels=4;unknowns=0;locus=RLOC_00003176
ChrX	stalkie_big_nohaplotig	exon	54885052	54885195	92	+	.	Parent=comp149822_c2_seq1.mrna1;Target=comp149822_c2_seq1 222 363 -
ChrX	stalkie_big_nohaplotig	exon	55207041	55207261	98	+	.	Parent=comp149822_c2_seq1.mrna1;Target=comp149822_c2_seq1 1 221 -
ChrX	stalkie_big_nohaplotig	CDS	54885097	54885195	.	+	0	Parent=comp149822_c2_seq1.mrna1;Target=comp149822_c2_seq1 222 321 .
ChrX	stalkie_big_nohaplotig	CDS	55207041	55207180	.	+	0	Parent=comp149822_c2_seq1.mrna1;Target=comp149822_c2_seq1 82 221 .
ChrX	gffcl	locus	54886917	54888098	.	-	.	ID=RLOC_00003177;geneIDs=comp141070_c0_seq1.path1;transcripts=comp141070_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54886917	54888098	.	-	.	ID=comp141070_c0_seq1.mrna1;geneID=comp141070_c0_seq1.path1;Name=comp141070_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1182;mismatches=0;indels=1;unknowns=0;Target=comp141070_c0_seq1 1183 1 .;CDS_Target=comp141070_c0_seq1 190 2 .;locus=RLOC_00003177
ChrX	stalkie_big_nohaplotig	exon	54886917	54888098	99	-	.	Parent=comp141070_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	54887909	54888097	.	-	0	Parent=comp141070_c0_seq1.mrna1
ChrX	gffcl	locus	54894445	54894772	.	-	.	ID=RLOC_00003179;geneIDs=comp146113_c0_seq1.path1;transcripts=comp146113_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54894445	54894772	.	-	.	ID=comp146113_c0_seq1.mrna1;geneID=comp146113_c0_seq1.path1;Name=comp146113_c0_seq1;Dir=indeterminatecoverage=99.7;identity=84.7;matches=320;mismatches=8;indels=50;unknowns=0;Target=comp146113_c0_seq1 379 2 .;CDS_Target=comp146113_c0_seq1 79 2 .;locus=RLOC_00003179
ChrX	stalkie_big_nohaplotig	exon	54894445	54894772	84	-	.	Parent=comp146113_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	54894695	54894772	.	-	0	Parent=comp146113_c0_seq1.mrna1
ChrX	gffcl	locus	54895490	54896527	.	-	.	ID=RLOC_00003180;geneIDs=comp153594_c0_seq1.path1;transcripts=comp153594_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54895490	54896527	.	-	.	ID=comp153594_c0_seq1.mrna1;geneID=comp153594_c0_seq1.path1;Name=comp153594_c0_seq1;Dir=indeterminatecoverage=97.7;identity=98.1;matches=1018;mismatches=16;indels=4;unknowns=0;Target=comp153594_c0_seq1 1034 1 .;CDS_Target=comp153594_c0_seq1 610 290 .;locus=RLOC_00003180
ChrX	stalkie_big_nohaplotig	exon	54895490	54896527	98	-	.	Parent=comp153594_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	54895914	54896234	.	-	0	Parent=comp153594_c0_seq1.mrna1
ChrX	gffcl	locus	54897798	54898511	.	-	.	ID=RLOC_00003181;geneIDs=comp144626_c0_seq1.path1;transcripts=comp144626_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54897798	54898511	.	-	.	ID=comp144626_c0_seq1.mrna1;geneID=comp144626_c0_seq1.path1;Name=comp144626_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.4;matches=710;mismatches=4;indels=0;unknowns=0;Target=comp144626_c0_seq1 715 2 .;CDS_Target=comp144626_c0_seq1 359 66 .;locus=RLOC_00003181
ChrX	stalkie_big_nohaplotig	exon	54897798	54898511	99	-	.	Parent=comp144626_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	54898154	54898447	.	-	0	Parent=comp144626_c0_seq1.mrna1
ChrX	gffcl	locus	54939878	54943572	.	-	.	ID=RLOC_00003182;geneIDs=comp157433_c0_seq1.path2;transcripts=comp157433_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	54939878	54943572	.	-	.	ID=comp157433_c0_seq1.mrna2;geneID=comp157433_c0_seq1.path2;Name=comp157433_c0_seq1;Dir=antisensecoverage=91.7;identity=94.4;matches=970;mismatches=19;indels=39;unknowns=0;Target=comp157433_c0_seq1 90 266 .;locus=RLOC_00003182
ChrX	stalkie_big_nohaplotig	exon	54939878	54940150	80	-	.	Parent=comp157433_c0_seq1.mrna2;Target=comp157433_c0_seq1 90 323 -
ChrX	stalkie_big_nohaplotig	exon	54940223	54940368	100	-	.	Parent=comp157433_c0_seq1.mrna2;Target=comp157433_c0_seq1 324 469 -
ChrX	stalkie_big_nohaplotig	exon	54942128	54942281	100	-	.	Parent=comp157433_c0_seq1.mrna2;Target=comp157433_c0_seq1 470 623 -
ChrX	stalkie_big_nohaplotig	exon	54942348	54942591	97	-	.	Parent=comp157433_c0_seq1.mrna2;Target=comp157433_c0_seq1 624 867 -
ChrX	stalkie_big_nohaplotig	exon	54943362	54943572	99	-	.	Parent=comp157433_c0_seq1.mrna2;Target=comp157433_c0_seq1 868 1078 -
ChrX	stalkie_big_nohaplotig	CDS	54939878	54940093	.	-	0	Parent=comp157433_c0_seq1.mrna2
ChrX	gffcl	locus	54968510	54972204	.	+	.	ID=RLOC_00003183;geneIDs=comp157433_c0_seq1.path1;transcripts=comp157433_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	54968510	54972204	.	+	.	ID=comp157433_c0_seq1.mrna1;geneID=comp157433_c0_seq1.path1;Name=comp157433_c0_seq1;Dir=antisensecoverage=91.7;identity=97.7;matches=968;mismatches=21;indels=2;unknowns=0;Target=comp157433_c0_seq1 917 1078 .;locus=RLOC_00003183
ChrX	stalkie_big_nohaplotig	exon	54968510	54968720	99	+	.	Parent=comp157433_c0_seq1.mrna1;Target=comp157433_c0_seq1 868 1078 -
ChrX	stalkie_big_nohaplotig	exon	54969491	54969734	97	+	.	Parent=comp157433_c0_seq1.mrna1;Target=comp157433_c0_seq1 624 867 -
ChrX	stalkie_big_nohaplotig	exon	54969801	54969954	100	+	.	Parent=comp157433_c0_seq1.mrna1;Target=comp157433_c0_seq1 470 623 -
ChrX	stalkie_big_nohaplotig	exon	54971714	54971859	100	+	.	Parent=comp157433_c0_seq1.mrna1;Target=comp157433_c0_seq1 324 469 -
ChrX	stalkie_big_nohaplotig	exon	54971932	54972042	91	+	.	Parent=comp157433_c0_seq1.mrna1;Target=comp157433_c0_seq1 215 323 -
ChrX	stalkie_big_nohaplotig	exon	54972080	54972204	93	+	.	Parent=comp157433_c0_seq1.mrna1;Target=comp157433_c0_seq1 90 214 -
ChrX	stalkie_big_nohaplotig	CDS	54968510	54968671	.	+	0	Parent=comp157433_c0_seq1.mrna1
ChrX	gffcl	locus	55036213	55036911	.	-	.	ID=RLOC_00003184;geneIDs=comp116511_c0_seq1.path1;transcripts=comp116511_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55036213	55036911	.	-	.	ID=comp116511_c0_seq1.mrna1;geneID=comp116511_c0_seq1.path1;Name=comp116511_c0_seq1;Dir=sensecoverage=98.3;identity=99.8;matches=628;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003184
ChrX	stalkie_big_nohaplotig	exon	55036213	55036508	100	-	.	Parent=comp116511_c0_seq1.mrna1;Target=comp116511_c0_seq1 345 640 +
ChrX	stalkie_big_nohaplotig	exon	55036579	55036911	99	-	.	Parent=comp116511_c0_seq1.mrna1;Target=comp116511_c0_seq1 12 344 +
ChrX	stalkie_big_nohaplotig	CDS	55036426	55036508	.	-	2	Parent=comp116511_c0_seq1.mrna1;Target=comp116511_c0_seq1 345 427 +
ChrX	stalkie_big_nohaplotig	CDS	55036579	55036705	.	-	0	Parent=comp116511_c0_seq1.mrna1;Target=comp116511_c0_seq1 218 344 +
ChrX	gffcl	locus	55205132	55217039	.	-	.	ID=RLOC_00003188;geneIDs=comp145641_c0_seq1.path1;transcripts=comp145641_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55205132	55217039	.	-	.	ID=comp145641_c0_seq1.mrna1;geneID=comp145641_c0_seq1.path1;Name=comp145641_c0_seq1;Dir=antisensecoverage=99.8;identity=98.7;matches=463;mismatches=4;indels=2;unknowns=0;Target=comp145641_c0_seq1 87 293 .;locus=RLOC_00003188
ChrX	stalkie_big_nohaplotig	exon	55205132	55205445	98	-	.	Parent=comp145641_c0_seq1.mrna1;Target=comp145641_c0_seq1 2 317 -
ChrX	stalkie_big_nohaplotig	exon	55216703	55216743	97	-	.	Parent=comp145641_c0_seq1.mrna1;Target=comp145641_c0_seq1 318 358 -
ChrX	stalkie_big_nohaplotig	exon	55216928	55217039	100	-	.	Parent=comp145641_c0_seq1.mrna1;Target=comp145641_c0_seq1 359 470 -
ChrX	stalkie_big_nohaplotig	CDS	55205215	55205421	.	-	0	Parent=comp145641_c0_seq1.mrna1
ChrX	gffcl	locus	55213674	55270746	.	+	.	ID=RLOC_00003189;geneIDs=FBgn0003255.1.path1;transcripts=FBgn0003255.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55213674	55270746	.	+	.	ID=FBgn0003255.1.mrna1;geneID=FBgn0003255.1.path1;Name=FBgn0003255.1;Dir=sensecoverage=100.0;identity=99.7;matches=4042;mismatches=14;indels=0;unknowns=0;locus=RLOC_00003189
ChrX	stalkie_big_nohaplotig	exon	55213674	55214230	99	+	.	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 1 557 +
ChrX	stalkie_big_nohaplotig	exon	55239656	55239727	100	+	.	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 558 629 +
ChrX	stalkie_big_nohaplotig	exon	55244133	55244276	100	+	.	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 630 773 +
ChrX	stalkie_big_nohaplotig	exon	55248037	55248180	100	+	.	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 774 917 +
ChrX	stalkie_big_nohaplotig	exon	55250872	55250943	100	+	.	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 918 989 +
ChrX	stalkie_big_nohaplotig	exon	55251255	55251326	100	+	.	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 990 1061 +
ChrX	stalkie_big_nohaplotig	exon	55252872	55252940	100	+	.	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 1062 1130 +
ChrX	stalkie_big_nohaplotig	exon	55261538	55261675	100	+	.	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 1131 1268 +
ChrX	stalkie_big_nohaplotig	exon	55263140	55263280	100	+	.	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 1269 1409 +
ChrX	stalkie_big_nohaplotig	exon	55264757	55264822	100	+	.	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 1410 1475 +
ChrX	stalkie_big_nohaplotig	exon	55266251	55266394	100	+	.	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 1476 1619 +
ChrX	stalkie_big_nohaplotig	exon	55266463	55266830	99	+	.	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 1620 1987 +
ChrX	stalkie_big_nohaplotig	exon	55266892	55268628	99	+	.	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 1988 3724 +
ChrX	stalkie_big_nohaplotig	exon	55270415	55270746	99	+	.	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 3725 4056 +
ChrX	stalkie_big_nohaplotig	CDS	55213674	55214230	.	+	0	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 1 557 +
ChrX	stalkie_big_nohaplotig	CDS	55239656	55239727	.	+	1	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 558 629 +
ChrX	stalkie_big_nohaplotig	CDS	55244133	55244276	.	+	1	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 630 773 +
ChrX	stalkie_big_nohaplotig	CDS	55248037	55248180	.	+	1	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 774 917 +
ChrX	stalkie_big_nohaplotig	CDS	55250872	55250943	.	+	1	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 918 989 +
ChrX	stalkie_big_nohaplotig	CDS	55251255	55251326	.	+	1	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 990 1061 +
ChrX	stalkie_big_nohaplotig	CDS	55252872	55252940	.	+	1	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 1062 1130 +
ChrX	stalkie_big_nohaplotig	CDS	55261538	55261675	.	+	1	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 1131 1268 +
ChrX	stalkie_big_nohaplotig	CDS	55263140	55263280	.	+	1	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 1269 1409 +
ChrX	stalkie_big_nohaplotig	CDS	55264757	55264822	.	+	1	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 1410 1475 +
ChrX	stalkie_big_nohaplotig	CDS	55266251	55266394	.	+	1	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 1476 1619 +
ChrX	stalkie_big_nohaplotig	CDS	55266463	55266830	.	+	1	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 1620 1987 +
ChrX	stalkie_big_nohaplotig	CDS	55266892	55268628	.	+	2	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 1988 3724 +
ChrX	stalkie_big_nohaplotig	CDS	55270415	55270746	.	+	2	Parent=FBgn0003255.1.mrna1;Target=FBgn0003255.1 3725 4056 +
ChrX	gffcl	locus	55220958	55241233	.	-	.	ID=RLOC_00003190;geneIDs=ORF736.path1,comp155136_c0_seq1.path1;transcripts=comp155136_c0_seq1.mrna1,ORF736.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55220958	55241233	.	-	.	ID=comp155136_c0_seq1.mrna1;geneID=comp155136_c0_seq1.path1;Name=comp155136_c0_seq1;Dir=sensecoverage=99.6;identity=99.5;matches=1961;mismatches=10;indels=0;unknowns=0;locus=RLOC_00003190
ChrX	stalkie_big_nohaplotig	exon	55220958	55222487	99	-	.	Parent=comp155136_c0_seq1.mrna1;Target=comp155136_c0_seq1 449 1978 +
ChrX	stalkie_big_nohaplotig	exon	55222539	55222620	100	-	.	Parent=comp155136_c0_seq1.mrna1;Target=comp155136_c0_seq1 367 448 +
ChrX	stalkie_big_nohaplotig	exon	55231187	55231253	100	-	.	Parent=comp155136_c0_seq1.mrna1;Target=comp155136_c0_seq1 300 366 +
ChrX	stalkie_big_nohaplotig	exon	55231778	55231832	100	-	.	Parent=comp155136_c0_seq1.mrna1;Target=comp155136_c0_seq1 245 299 +
ChrX	stalkie_big_nohaplotig	exon	55232061	55232182	99	-	.	Parent=comp155136_c0_seq1.mrna1;Target=comp155136_c0_seq1 123 244 +
ChrX	stalkie_big_nohaplotig	exon	55241119	55241233	99	-	.	Parent=comp155136_c0_seq1.mrna1;Target=comp155136_c0_seq1 8 122 +
ChrX	stalkie_big_nohaplotig	CDS	55221183	55222487	.	-	0	Parent=comp155136_c0_seq1.mrna1;Target=comp155136_c0_seq1 449 1753 +
ChrX	stalkie_big_nohaplotig	CDS	55222539	55222574	.	-	0	Parent=comp155136_c0_seq1.mrna1;Target=comp155136_c0_seq1 413 448 +
ChrX	stalkie_big_nohaplotig	mRNA	55221186	55225720	.	-	.	ID=ORF736.mrna1;geneID=ORF736.path1;Name=ORF736;Dir=sensecoverage=100.0;identity=99.4;matches=1467;mismatches=9;indels=0;unknowns=0;locus=RLOC_00003190
ChrX	stalkie_big_nohaplotig	exon	55221186	55222487	99	-	.	Parent=ORF736.mrna1;Target=ORF736 175 1476 +
ChrX	stalkie_big_nohaplotig	exon	55222539	55222620	100	-	.	Parent=ORF736.mrna1;Target=ORF736 93 174 +
ChrX	stalkie_big_nohaplotig	exon	55225629	55225720	98	-	.	Parent=ORF736.mrna1;Target=ORF736 1 92 +
ChrX	stalkie_big_nohaplotig	CDS	55221186	55222487	.	-	0	Parent=ORF736.mrna1;Target=ORF736 175 1476 +
ChrX	stalkie_big_nohaplotig	CDS	55222539	55222620	.	-	1	Parent=ORF736.mrna1;Target=ORF736 93 174 +
ChrX	stalkie_big_nohaplotig	CDS	55225629	55225720	.	-	0	Parent=ORF736.mrna1;Target=ORF736 1 92 +
ChrX	gffcl	locus	55271339	55278061	.	.	.	ID=RLOC_00003191;geneIDs=FBgn0028939.1.path1,comp145201_c0_seq1.path1;transcripts=FBgn0028939.1.mrna1,comp145201_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55271339	55278061	.	-	.	ID=FBgn0028939.1.mrna1;geneID=FBgn0028939.1.path1;Name=FBgn0028939.1;Dir=sensecoverage=100.0;identity=100.0;matches=2289;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003191
ChrX	stalkie_big_nohaplotig	exon	55271339	55271546	100	-	.	Parent=FBgn0028939.1.mrna1;Target=FBgn0028939.1 2082 2289 +
ChrX	stalkie_big_nohaplotig	exon	55273361	55275178	100	-	.	Parent=FBgn0028939.1.mrna1;Target=FBgn0028939.1 264 2081 +
ChrX	stalkie_big_nohaplotig	exon	55275246	55275304	100	-	.	Parent=FBgn0028939.1.mrna1;Target=FBgn0028939.1 205 263 +
ChrX	stalkie_big_nohaplotig	exon	55275387	55275504	100	-	.	Parent=FBgn0028939.1.mrna1;Target=FBgn0028939.1 87 204 +
ChrX	stalkie_big_nohaplotig	exon	55277976	55278061	100	-	.	Parent=FBgn0028939.1.mrna1;Target=FBgn0028939.1 1 86 +
ChrX	stalkie_big_nohaplotig	CDS	55271339	55271546	.	-	1	Parent=FBgn0028939.1.mrna1;Target=FBgn0028939.1 2082 2289 +
ChrX	stalkie_big_nohaplotig	CDS	55273361	55275178	.	-	1	Parent=FBgn0028939.1.mrna1;Target=FBgn0028939.1 264 2081 +
ChrX	stalkie_big_nohaplotig	CDS	55275246	55275304	.	-	0	Parent=FBgn0028939.1.mrna1;Target=FBgn0028939.1 205 263 +
ChrX	stalkie_big_nohaplotig	CDS	55275387	55275504	.	-	1	Parent=FBgn0028939.1.mrna1;Target=FBgn0028939.1 87 204 +
ChrX	stalkie_big_nohaplotig	CDS	55277976	55278061	.	-	0	Parent=FBgn0028939.1.mrna1;Target=FBgn0028939.1 1 86 +
ChrX	stalkie_big_nohaplotig	mRNA	55271498	55272028	.	+	.	ID=comp145201_c0_seq1.mrna1;geneID=comp145201_c0_seq1.path1;Name=comp145201_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=530;mismatches=1;indels=0;unknowns=0;Target=comp145201_c0_seq1 531 1 .;CDS_Target=comp145201_c0_seq1 182 3 .;locus=RLOC_00003191
ChrX	stalkie_big_nohaplotig	exon	55271498	55272028	99	+	.	Parent=comp145201_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	55271500	55271679	.	+	0	Parent=comp145201_c0_seq1.mrna1
ChrX	gffcl	locus	55272180	55272589	.	-	.	ID=RLOC_00003192;geneIDs=comp344234_c0_seq1.path2;transcripts=comp344234_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	55272180	55272589	.	-	.	ID=comp344234_c0_seq1.mrna2;geneID=comp344234_c0_seq1.path2;Name=comp344234_c0_seq1;Dir=indeterminatecoverage=90.5;identity=99.8;matches=409;mismatches=1;indels=0;unknowns=0;Target=comp344234_c0_seq1 453 44 .;CDS_Target=comp344234_c0_seq1 115 44 .;locus=RLOC_00003192
ChrX	stalkie_big_nohaplotig	exon	55272180	55272589	99	-	.	Parent=comp344234_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	55272518	55272589	.	-	0	Parent=comp344234_c0_seq1.mrna2
ChrX	gffcl	locus	55280858	55289934	.	+	.	ID=RLOC_00003193;geneIDs=comp153172_c0_seq1.path1;transcripts=comp153172_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55280858	55289934	.	+	.	ID=comp153172_c0_seq1.mrna1;geneID=comp153172_c0_seq1.path1;Name=comp153172_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=1088;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003193
ChrX	stalkie_big_nohaplotig	exon	55280858	55280879	95	+	.	Parent=comp153172_c0_seq1.mrna1;Target=comp153172_c0_seq1 1068 1089 -
ChrX	stalkie_big_nohaplotig	exon	55288733	55288921	100	+	.	Parent=comp153172_c0_seq1.mrna1;Target=comp153172_c0_seq1 879 1067 -
ChrX	stalkie_big_nohaplotig	exon	55288992	55289125	100	+	.	Parent=comp153172_c0_seq1.mrna1;Target=comp153172_c0_seq1 745 878 -
ChrX	stalkie_big_nohaplotig	exon	55289191	55289934	100	+	.	Parent=comp153172_c0_seq1.mrna1;Target=comp153172_c0_seq1 1 744 -
ChrX	stalkie_big_nohaplotig	CDS	55288799	55288921	.	+	0	Parent=comp153172_c0_seq1.mrna1;Target=comp153172_c0_seq1 879 1001 .
ChrX	stalkie_big_nohaplotig	CDS	55288992	55289125	.	+	0	Parent=comp153172_c0_seq1.mrna1;Target=comp153172_c0_seq1 745 878 .
ChrX	stalkie_big_nohaplotig	CDS	55289191	55289932	.	+	1	Parent=comp153172_c0_seq1.mrna1;Target=comp153172_c0_seq1 3 744 .
ChrX	gffcl	locus	55300038	55300808	.	-	.	ID=RLOC_00003195;geneIDs=ORF3077.path1;transcripts=ORF3077.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55300038	55300808	.	-	.	ID=ORF3077.mrna1;geneID=ORF3077.path1;Name=ORF3077;Dir=indeterminatecoverage=100.0;identity=100.0;matches=771;mismatches=0;indels=0;unknowns=0;Target=ORF3077 771 1 .;locus=RLOC_00003195
ChrX	stalkie_big_nohaplotig	exon	55300038	55300808	100	-	.	Parent=ORF3077.mrna1
ChrX	stalkie_big_nohaplotig	CDS	55300038	55300808	.	-	0	Parent=ORF3077.mrna1
ChrX	gffcl	locus	55304976	55306169	.	-	.	ID=RLOC_00003196;geneIDs=comp154940_c0_seq1.path1;transcripts=comp154940_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55304976	55306169	.	-	.	ID=comp154940_c0_seq1.mrna1;geneID=comp154940_c0_seq1.path1;Name=comp154940_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=1124;mismatches=5;indels=0;unknowns=0;locus=RLOC_00003196
ChrX	stalkie_big_nohaplotig	exon	55304976	55305214	98	-	.	Parent=comp154940_c0_seq1.mrna1;Target=comp154940_c0_seq1 891 1129 +
ChrX	stalkie_big_nohaplotig	exon	55305280	55306169	99	-	.	Parent=comp154940_c0_seq1.mrna1;Target=comp154940_c0_seq1 1 890 +
ChrX	stalkie_big_nohaplotig	CDS	55305150	55305214	.	-	2	Parent=comp154940_c0_seq1.mrna1;Target=comp154940_c0_seq1 891 955 +
ChrX	stalkie_big_nohaplotig	CDS	55305280	55306099	.	-	0	Parent=comp154940_c0_seq1.mrna1;Target=comp154940_c0_seq1 71 890 +
ChrX	gffcl	locus	55307284	55309338	.	+	.	ID=RLOC_00003197;geneIDs=comp160952_c0_seq1.path1;transcripts=comp160952_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55307284	55309338	.	+	.	ID=comp160952_c0_seq1.mrna1;geneID=comp160952_c0_seq1.path1;Name=comp160952_c0_seq1;Dir=antisensecoverage=97.1;identity=98.8;matches=1278;mismatches=15;indels=1;unknowns=0;locus=RLOC_00003197
ChrX	stalkie_big_nohaplotig	exon	55307284	55307445	100	+	.	Parent=comp160952_c0_seq1.mrna1;Target=comp160952_c0_seq1 1145 1306 -
ChrX	stalkie_big_nohaplotig	exon	55307502	55307576	100	+	.	Parent=comp160952_c0_seq1.mrna1;Target=comp160952_c0_seq1 1070 1144 -
ChrX	stalkie_big_nohaplotig	exon	55308146	55308324	100	+	.	Parent=comp160952_c0_seq1.mrna1;Target=comp160952_c0_seq1 891 1069 -
ChrX	stalkie_big_nohaplotig	exon	55308401	55308470	100	+	.	Parent=comp160952_c0_seq1.mrna1;Target=comp160952_c0_seq1 821 890 -
ChrX	stalkie_big_nohaplotig	exon	55308532	55309338	98	+	.	Parent=comp160952_c0_seq1.mrna1;Target=comp160952_c0_seq1 13 820 -
ChrX	stalkie_big_nohaplotig	CDS	55307388	55307445	.	+	0	Parent=comp160952_c0_seq1.mrna1;Target=comp160952_c0_seq1 1145 1202 .
ChrX	stalkie_big_nohaplotig	CDS	55307502	55307576	.	+	2	Parent=comp160952_c0_seq1.mrna1;Target=comp160952_c0_seq1 1070 1144 .
ChrX	stalkie_big_nohaplotig	CDS	55308146	55308324	.	+	2	Parent=comp160952_c0_seq1.mrna1;Target=comp160952_c0_seq1 891 1069 .
ChrX	stalkie_big_nohaplotig	CDS	55308401	55308421	.	+	0	Parent=comp160952_c0_seq1.mrna1;Target=comp160952_c0_seq1 870 890 .
ChrX	gffcl	locus	55311647	55312327	.	+	.	ID=RLOC_00003198;geneIDs=FBgn0001967.1.path1;transcripts=FBgn0001967.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55311647	55312327	.	+	.	ID=FBgn0001967.1.mrna1;geneID=FBgn0001967.1.path1;Name=FBgn0001967.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=681;mismatches=0;indels=0;unknowns=0;Target=FBgn0001967.1 681 1 .;locus=RLOC_00003198
ChrX	stalkie_big_nohaplotig	exon	55311647	55312327	100	+	.	Parent=FBgn0001967.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	55311647	55312327	.	+	0	Parent=FBgn0001967.1.mrna1
ChrX	gffcl	locus	55324288	55342700	.	-	.	ID=RLOC_00003201;geneIDs=FBgn0028936.1.path1,comp160944_c1_seq1.path1;transcripts=comp160944_c1_seq1.mrna1,FBgn0028936.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55324288	55342700	.	-	.	ID=comp160944_c1_seq1.mrna1;geneID=comp160944_c1_seq1.path1;Name=comp160944_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=4195;mismatches=14;indels=0;unknowns=0;locus=RLOC_00003201
ChrX	stalkie_big_nohaplotig	exon	55324288	55324550	99	-	.	Parent=comp160944_c1_seq1.mrna1;Target=comp160944_c1_seq1 4210 3948 .
ChrX	stalkie_big_nohaplotig	exon	55326998	55329074	99	-	.	Parent=comp160944_c1_seq1.mrna1;Target=comp160944_c1_seq1 3947 1871 .
ChrX	stalkie_big_nohaplotig	exon	55329788	55330117	99	-	.	Parent=comp160944_c1_seq1.mrna1;Target=comp160944_c1_seq1 1870 1541 .
ChrX	stalkie_big_nohaplotig	exon	55330178	55330732	99	-	.	Parent=comp160944_c1_seq1.mrna1;Target=comp160944_c1_seq1 1540 986 .
ChrX	stalkie_big_nohaplotig	exon	55333863	55334101	100	-	.	Parent=comp160944_c1_seq1.mrna1;Target=comp160944_c1_seq1 985 747 .
ChrX	stalkie_big_nohaplotig	exon	55341687	55341900	100	-	.	Parent=comp160944_c1_seq1.mrna1;Target=comp160944_c1_seq1 746 533 .
ChrX	stalkie_big_nohaplotig	exon	55341962	55342157	98	-	.	Parent=comp160944_c1_seq1.mrna1;Target=comp160944_c1_seq1 532 337 .
ChrX	stalkie_big_nohaplotig	exon	55342366	55342700	99	-	.	Parent=comp160944_c1_seq1.mrna1;Target=comp160944_c1_seq1 336 2 .
ChrX	stalkie_big_nohaplotig	CDS	55330021	55330117	.	-	1	Parent=comp160944_c1_seq1.mrna1;Target=comp160944_c1_seq1 1637 1541 .
ChrX	stalkie_big_nohaplotig	CDS	55330178	55330732	.	-	1	Parent=comp160944_c1_seq1.mrna1;Target=comp160944_c1_seq1 1540 986 .
ChrX	stalkie_big_nohaplotig	CDS	55333863	55333984	.	-	0	Parent=comp160944_c1_seq1.mrna1;Target=comp160944_c1_seq1 985 864 .
ChrX	stalkie_big_nohaplotig	mRNA	55330024	55334266	.	-	.	ID=FBgn0028936.1.mrna1;geneID=FBgn0028936.1.path1;Name=FBgn0028936.1;Dir=sensecoverage=100.0;identity=99.7;matches=1050;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003201
ChrX	stalkie_big_nohaplotig	exon	55330024	55330117	100	-	.	Parent=FBgn0028936.1.mrna1;Target=FBgn0028936.1 960 1053 +
ChrX	stalkie_big_nohaplotig	exon	55330178	55330732	99	-	.	Parent=FBgn0028936.1.mrna1;Target=FBgn0028936.1 405 959 +
ChrX	stalkie_big_nohaplotig	exon	55333863	55334266	100	-	.	Parent=FBgn0028936.1.mrna1;Target=FBgn0028936.1 1 404 +
ChrX	stalkie_big_nohaplotig	CDS	55330024	55330117	.	-	1	Parent=FBgn0028936.1.mrna1;Target=FBgn0028936.1 960 1053 +
ChrX	stalkie_big_nohaplotig	CDS	55330178	55330732	.	-	1	Parent=FBgn0028936.1.mrna1;Target=FBgn0028936.1 405 959 +
ChrX	stalkie_big_nohaplotig	CDS	55333863	55334266	.	-	0	Parent=FBgn0028936.1.mrna1;Target=FBgn0028936.1 1 404 +
ChrX	gffcl	locus	55324323	55329810	.	+	.	ID=RLOC_00003202;geneIDs=FBgn0243514.1.path1;transcripts=FBgn0243514.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55324323	55329810	.	+	.	ID=FBgn0243514.1.mrna1;geneID=FBgn0243514.1.path1;Name=FBgn0243514.1;Dir=sensecoverage=100.0;identity=99.9;matches=2326;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003202
ChrX	stalkie_big_nohaplotig	exon	55324323	55324550	100	+	.	Parent=FBgn0243514.1.mrna1;Target=FBgn0243514.1 1 228 +
ChrX	stalkie_big_nohaplotig	exon	55326998	55329074	99	+	.	Parent=FBgn0243514.1.mrna1;Target=FBgn0243514.1 229 2305 +
ChrX	stalkie_big_nohaplotig	exon	55329788	55329810	100	+	.	Parent=FBgn0243514.1.mrna1;Target=FBgn0243514.1 2306 2328 +
ChrX	stalkie_big_nohaplotig	CDS	55324323	55324550	.	+	0	Parent=FBgn0243514.1.mrna1;Target=FBgn0243514.1 1 228 +
ChrX	stalkie_big_nohaplotig	CDS	55326998	55329074	.	+	0	Parent=FBgn0243514.1.mrna1;Target=FBgn0243514.1 229 2305 +
ChrX	stalkie_big_nohaplotig	CDS	55329788	55329810	.	+	2	Parent=FBgn0243514.1.mrna1;Target=FBgn0243514.1 2306 2328 +
ChrX	gffcl	locus	55337428	55339725	.	+	.	ID=RLOC_00003203;geneIDs=FBgn0028542.1.path1;transcripts=FBgn0028542.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55337428	55339725	.	+	.	ID=FBgn0028542.1.mrna1;geneID=FBgn0028542.1.path1;Name=FBgn0028542.1;Dir=sensecoverage=100.0;identity=99.9;matches=1251;mismatches=0;indels=1;unknowns=0;locus=RLOC_00003203
ChrX	stalkie_big_nohaplotig	exon	55337428	55337615	100	+	.	Parent=FBgn0028542.1.mrna1;Target=FBgn0028542.1 1 188 +
ChrX	stalkie_big_nohaplotig	exon	55338468	55338918	100	+	.	Parent=FBgn0028542.1.mrna1;Target=FBgn0028542.1 189 639 +
ChrX	stalkie_big_nohaplotig	exon	55338985	55339101	99	+	.	Parent=FBgn0028542.1.mrna1;Target=FBgn0028542.1 640 755 +
ChrX	stalkie_big_nohaplotig	exon	55339174	55339371	100	+	.	Parent=FBgn0028542.1.mrna1;Target=FBgn0028542.1 756 953 +
ChrX	stalkie_big_nohaplotig	exon	55339428	55339725	100	+	.	Parent=FBgn0028542.1.mrna1;Target=FBgn0028542.1 954 1251 +
ChrX	stalkie_big_nohaplotig	CDS	55337428	55337615	.	+	0	Parent=FBgn0028542.1.mrna1;Target=FBgn0028542.1 1 188 +
ChrX	stalkie_big_nohaplotig	CDS	55338468	55338918	.	+	1	Parent=FBgn0028542.1.mrna1;Target=FBgn0028542.1 189 639 +
ChrX	stalkie_big_nohaplotig	CDS	55338985	55339101	.	+	0	Parent=FBgn0028542.1.mrna1;Target=FBgn0028542.1 640 755 +
ChrX	stalkie_big_nohaplotig	CDS	55339174	55339371	.	+	0	Parent=FBgn0028542.1.mrna1;Target=FBgn0028542.1 756 953 +
ChrX	stalkie_big_nohaplotig	CDS	55339428	55339725	.	+	0	Parent=FBgn0028542.1.mrna1;Target=FBgn0028542.1 954 1251 +
ChrX	gffcl	locus	55349446	55350384	.	+	.	ID=RLOC_00003204;geneIDs=comp148870_c0_seq1.path1;transcripts=comp148870_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55349446	55350384	.	+	.	ID=comp148870_c0_seq1.mrna1;geneID=comp148870_c0_seq1.path1;Name=comp148870_c0_seq1;Dir=antisensecoverage=92.8;identity=99.8;matches=851;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003204
ChrX	stalkie_big_nohaplotig	exon	55349446	55349828	99	+	.	Parent=comp148870_c0_seq1.mrna1;Target=comp148870_c0_seq1 471 853 -
ChrX	stalkie_big_nohaplotig	exon	55349915	55350384	99	+	.	Parent=comp148870_c0_seq1.mrna1;Target=comp148870_c0_seq1 1 470 -
ChrX	stalkie_big_nohaplotig	CDS	55349665	55349828	.	+	0	Parent=comp148870_c0_seq1.mrna1;Target=comp148870_c0_seq1 471 634 .
ChrX	stalkie_big_nohaplotig	CDS	55349915	55350116	.	+	1	Parent=comp148870_c0_seq1.mrna1;Target=comp148870_c0_seq1 269 470 .
ChrX	gffcl	locus	55356800	55366048	.	+	.	ID=RLOC_00003205;geneIDs=FBgn0028543.1.path1;transcripts=FBgn0028543.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55356800	55366048	.	+	.	ID=FBgn0028543.1.mrna1;geneID=FBgn0028543.1.path1;Name=FBgn0028543.1;Dir=sensecoverage=100.0;identity=99.4;matches=1267;mismatches=8;indels=0;unknowns=0;locus=RLOC_00003205
ChrX	stalkie_big_nohaplotig	exon	55356800	55357230	99	+	.	Parent=FBgn0028543.1.mrna1;Target=FBgn0028543.1 1 431 +
ChrX	stalkie_big_nohaplotig	exon	55365136	55365672	99	+	.	Parent=FBgn0028543.1.mrna1;Target=FBgn0028543.1 432 968 +
ChrX	stalkie_big_nohaplotig	exon	55365742	55366048	99	+	.	Parent=FBgn0028543.1.mrna1;Target=FBgn0028543.1 969 1275 +
ChrX	stalkie_big_nohaplotig	CDS	55356800	55357230	.	+	0	Parent=FBgn0028543.1.mrna1;Target=FBgn0028543.1 1 431 +
ChrX	stalkie_big_nohaplotig	CDS	55365136	55365672	.	+	1	Parent=FBgn0028543.1.mrna1;Target=FBgn0028543.1 432 968 +
ChrX	stalkie_big_nohaplotig	CDS	55365742	55366048	.	+	1	Parent=FBgn0028543.1.mrna1;Target=FBgn0028543.1 969 1275 +
ChrX	gffcl	locus	55378054	55418287	.	-	.	ID=RLOC_00003207;geneIDs=FBgn0261514.1.path1;transcripts=FBgn0261514.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55378054	55418287	.	-	.	ID=FBgn0261514.1.mrna1;geneID=FBgn0261514.1.path1;Name=FBgn0261514.1;Dir=sensecoverage=100.0;identity=100.0;matches=1449;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003207
ChrX	stalkie_big_nohaplotig	exon	55378054	55378066	100	-	.	Parent=FBgn0261514.1.mrna1;Target=FBgn0261514.1 1437 1449 +
ChrX	stalkie_big_nohaplotig	exon	55378193	55378933	100	-	.	Parent=FBgn0261514.1.mrna1;Target=FBgn0261514.1 696 1436 +
ChrX	stalkie_big_nohaplotig	exon	55380446	55380563	100	-	.	Parent=FBgn0261514.1.mrna1;Target=FBgn0261514.1 578 695 +
ChrX	stalkie_big_nohaplotig	exon	55382490	55382664	100	-	.	Parent=FBgn0261514.1.mrna1;Target=FBgn0261514.1 403 577 +
ChrX	stalkie_big_nohaplotig	exon	55417886	55418287	100	-	.	Parent=FBgn0261514.1.mrna1;Target=FBgn0261514.1 1 402 +
ChrX	stalkie_big_nohaplotig	CDS	55378054	55378066	.	-	1	Parent=FBgn0261514.1.mrna1;Target=FBgn0261514.1 1437 1449 +
ChrX	stalkie_big_nohaplotig	CDS	55378193	55378933	.	-	1	Parent=FBgn0261514.1.mrna1;Target=FBgn0261514.1 696 1436 +
ChrX	stalkie_big_nohaplotig	CDS	55380446	55380563	.	-	2	Parent=FBgn0261514.1.mrna1;Target=FBgn0261514.1 578 695 +
ChrX	stalkie_big_nohaplotig	CDS	55382490	55382664	.	-	0	Parent=FBgn0261514.1.mrna1;Target=FBgn0261514.1 403 577 +
ChrX	stalkie_big_nohaplotig	CDS	55417886	55418287	.	-	0	Parent=FBgn0261514.1.mrna1;Target=FBgn0261514.1 1 402 +
ChrX	gffcl	locus	55448662	55764154	.	-	.	ID=RLOC_00003208;geneIDs=FBgn0032536.1.path1;transcripts=FBgn0032536.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55448662	55764154	.	-	.	ID=FBgn0032536.1.mrna1;geneID=FBgn0032536.1.path1;Name=FBgn0032536.1;Dir=sensecoverage=100.0;identity=100.0;matches=2661;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003208
ChrX	stalkie_big_nohaplotig	exon	55448662	55448971	100	-	.	Parent=FBgn0032536.1.mrna1;Target=FBgn0032536.1 2352 2661 +
ChrX	stalkie_big_nohaplotig	exon	55449041	55449181	100	-	.	Parent=FBgn0032536.1.mrna1;Target=FBgn0032536.1 2211 2351 +
ChrX	stalkie_big_nohaplotig	exon	55750069	55750167	100	-	.	Parent=FBgn0032536.1.mrna1;Target=FBgn0032536.1 2112 2210 +
ChrX	stalkie_big_nohaplotig	exon	55751907	55752010	100	-	.	Parent=FBgn0032536.1.mrna1;Target=FBgn0032536.1 2008 2111 +
ChrX	stalkie_big_nohaplotig	exon	55752071	55752210	100	-	.	Parent=FBgn0032536.1.mrna1;Target=FBgn0032536.1 1868 2007 +
ChrX	stalkie_big_nohaplotig	exon	55752277	55752861	100	-	.	Parent=FBgn0032536.1.mrna1;Target=FBgn0032536.1 1283 1867 +
ChrX	stalkie_big_nohaplotig	exon	55752963	55753203	100	-	.	Parent=FBgn0032536.1.mrna1;Target=FBgn0032536.1 1042 1282 +
ChrX	stalkie_big_nohaplotig	exon	55755104	55755262	100	-	.	Parent=FBgn0032536.1.mrna1;Target=FBgn0032536.1 883 1041 +
ChrX	stalkie_big_nohaplotig	exon	55763208	55763795	100	-	.	Parent=FBgn0032536.1.mrna1;Target=FBgn0032536.1 295 882 +
ChrX	stalkie_big_nohaplotig	exon	55763861	55764154	100	-	.	Parent=FBgn0032536.1.mrna1;Target=FBgn0032536.1 1 294 +
ChrX	stalkie_big_nohaplotig	CDS	55448662	55448971	.	-	1	Parent=FBgn0032536.1.mrna1;Target=FBgn0032536.1 2352 2661 +
ChrX	stalkie_big_nohaplotig	CDS	55449041	55449181	.	-	1	Parent=FBgn0032536.1.mrna1;Target=FBgn0032536.1 2211 2351 +
ChrX	stalkie_big_nohaplotig	CDS	55750069	55750167	.	-	1	Parent=FBgn0032536.1.mrna1;Target=FBgn0032536.1 2112 2210 +
ChrX	stalkie_big_nohaplotig	CDS	55751907	55752010	.	-	0	Parent=FBgn0032536.1.mrna1;Target=FBgn0032536.1 2008 2111 +
ChrX	stalkie_big_nohaplotig	CDS	55752071	55752210	.	-	2	Parent=FBgn0032536.1.mrna1;Target=FBgn0032536.1 1868 2007 +
ChrX	stalkie_big_nohaplotig	CDS	55752277	55752861	.	-	2	Parent=FBgn0032536.1.mrna1;Target=FBgn0032536.1 1283 1867 +
ChrX	stalkie_big_nohaplotig	CDS	55752963	55753203	.	-	0	Parent=FBgn0032536.1.mrna1;Target=FBgn0032536.1 1042 1282 +
ChrX	stalkie_big_nohaplotig	CDS	55755104	55755262	.	-	0	Parent=FBgn0032536.1.mrna1;Target=FBgn0032536.1 883 1041 +
ChrX	stalkie_big_nohaplotig	CDS	55763208	55763795	.	-	0	Parent=FBgn0032536.1.mrna1;Target=FBgn0032536.1 295 882 +
ChrX	stalkie_big_nohaplotig	CDS	55763861	55764154	.	-	0	Parent=FBgn0032536.1.mrna1;Target=FBgn0032536.1 1 294 +
ChrX	gffcl	locus	55479624	55489770	.	+	.	ID=RLOC_00003209;geneIDs=comp135531_c0_seq1.path1;transcripts=comp135531_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55479624	55489770	.	+	.	ID=comp135531_c0_seq1.mrna1;geneID=comp135531_c0_seq1.path1;Name=comp135531_c0_seq1;Dir=antisensecoverage=99.4;identity=100.0;matches=2511;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003209
ChrX	stalkie_big_nohaplotig	exon	55479624	55479717	100	+	.	Parent=comp135531_c0_seq1.mrna1;Target=comp135531_c0_seq1 2433 2526 -
ChrX	stalkie_big_nohaplotig	exon	55479855	55479927	100	+	.	Parent=comp135531_c0_seq1.mrna1;Target=comp135531_c0_seq1 2360 2432 -
ChrX	stalkie_big_nohaplotig	exon	55487427	55489770	100	+	.	Parent=comp135531_c0_seq1.mrna1;Target=comp135531_c0_seq1 16 2359 -
ChrX	stalkie_big_nohaplotig	CDS	55479916	55479927	.	+	0	Parent=comp135531_c0_seq1.mrna1;Target=comp135531_c0_seq1 2360 2371 .
ChrX	stalkie_big_nohaplotig	CDS	55487427	55488836	.	+	0	Parent=comp135531_c0_seq1.mrna1;Target=comp135531_c0_seq1 950 2359 .
ChrX	gffcl	locus	55488309	55581317	.	-	.	ID=RLOC_00003210;geneIDs=comp147074_c0_seq1.path1;transcripts=comp147074_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55488309	55581317	.	-	.	ID=comp147074_c0_seq1.mrna1;geneID=comp147074_c0_seq1.path1;Name=comp147074_c0_seq1;Dir=indeterminatecoverage=95.2;identity=99.5;matches=1476;mismatches=2;indels=6;unknowns=0;locus=RLOC_00003210
ChrX	stalkie_big_nohaplotig	exon	55488309	55488340	75	-	.	Parent=comp147074_c0_seq1.mrna1;Target=comp147074_c0_seq1 1489 1464 .
ChrX	stalkie_big_nohaplotig	exon	55503452	55503454	100	-	.	Parent=comp147074_c0_seq1.mrna1;Target=comp147074_c0_seq1 1463 1461 .
ChrX	stalkie_big_nohaplotig	exon	55579869	55581317	100	-	.	Parent=comp147074_c0_seq1.mrna1;Target=comp147074_c0_seq1 1460 12 .
ChrX	stalkie_big_nohaplotig	CDS	55488309	55488340	.	-	2	Parent=comp147074_c0_seq1.mrna1;Target=comp147074_c0_seq1 1489 1464 .
ChrX	stalkie_big_nohaplotig	CDS	55503452	55503454	.	-	2	Parent=comp147074_c0_seq1.mrna1;Target=comp147074_c0_seq1 1463 1461 .
ChrX	stalkie_big_nohaplotig	CDS	55579869	55580415	.	-	0	Parent=comp147074_c0_seq1.mrna1;Target=comp147074_c0_seq1 1460 914 .
ChrX	gffcl	locus	55571621	55579881	.	+	.	ID=RLOC_00003211;geneIDs=comp132954_c0_seq1.path1;transcripts=comp132954_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55571621	55579881	.	+	.	ID=comp132954_c0_seq1.mrna1;geneID=comp132954_c0_seq1.path1;Name=comp132954_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=845;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003211
ChrX	stalkie_big_nohaplotig	exon	55571621	55571856	100	+	.	Parent=comp132954_c0_seq1.mrna1;Target=comp132954_c0_seq1 1 236 +
ChrX	stalkie_big_nohaplotig	exon	55579273	55579881	100	+	.	Parent=comp132954_c0_seq1.mrna1;Target=comp132954_c0_seq1 237 845 +
ChrX	stalkie_big_nohaplotig	CDS	55571845	55571856	.	+	0	Parent=comp132954_c0_seq1.mrna1;Target=comp132954_c0_seq1 225 236 +
ChrX	stalkie_big_nohaplotig	CDS	55579273	55579881	.	+	0	Parent=comp132954_c0_seq1.mrna1;Target=comp132954_c0_seq1 237 845 +
ChrX	gffcl	locus	55577144	55578812	.	+	.	ID=RLOC_00003212;geneIDs=comp142397_c0_seq1.path1;transcripts=comp142397_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55577144	55578812	.	+	.	ID=comp142397_c0_seq1.mrna1;geneID=comp142397_c0_seq1.path1;Name=comp142397_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1669;mismatches=0;indels=0;unknowns=0;Target=comp142397_c0_seq1 1669 1 .;CDS_Target=comp142397_c0_seq1 748 506 .;locus=RLOC_00003212
ChrX	stalkie_big_nohaplotig	exon	55577144	55578812	100	+	.	Parent=comp142397_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	55577649	55577891	.	+	0	Parent=comp142397_c0_seq1.mrna1
ChrX	gffcl	locus	55656804	55659367	.	+	.	ID=RLOC_00003213;geneIDs=comp161953_c2_seq1.path1;transcripts=comp161953_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55656804	55659367	.	+	.	ID=comp161953_c2_seq1.mrna1;geneID=comp161953_c2_seq1.path1;Name=comp161953_c2_seq1;Dir=indeterminatecoverage=100.0;identity=96.6;matches=2490;mismatches=70;indels=18;unknowns=0;Target=comp161953_c2_seq1 2574 1 .;CDS_Target=comp161953_c2_seq1 46 2 .;locus=RLOC_00003213
ChrX	stalkie_big_nohaplotig	exon	55656804	55659367	96	+	.	Parent=comp161953_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	55656805	55656849	.	+	0	Parent=comp161953_c2_seq1.mrna1
ChrX	gffcl	locus	55664759	55665136	.	+	.	ID=RLOC_00003214;geneIDs=comp137898_c1_seq1.path1;transcripts=comp137898_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55664759	55665136	.	+	.	ID=comp137898_c1_seq1.mrna1;geneID=comp137898_c1_seq1.path1;Name=comp137898_c1_seq1;Dir=indeterminatecoverage=100.0;identity=95.7;matches=376;mismatches=2;indels=15;unknowns=0;Target=comp137898_c1_seq1 393 1 .;CDS_Target=comp137898_c1_seq1 168 1 .;locus=RLOC_00003214
ChrX	stalkie_big_nohaplotig	exon	55664759	55665136	95	+	.	Parent=comp137898_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	55664759	55664911	.	+	0	Parent=comp137898_c1_seq1.mrna1
ChrX	gffcl	locus	55707012	55707472	.	+	.	ID=RLOC_00003215;geneIDs=comp150438_c0_seq1.path2;transcripts=comp150438_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	55707012	55707472	.	+	.	ID=comp150438_c0_seq1.mrna2;geneID=comp150438_c0_seq1.path2;Name=comp150438_c0_seq1;Dir=antisensecoverage=99.8;identity=98.2;matches=393;mismatches=6;indels=1;unknowns=0;locus=RLOC_00003215
ChrX	stalkie_big_nohaplotig	exon	55707012	55707104	95	+	.	Parent=comp150438_c0_seq1.mrna2;Target=comp150438_c0_seq1 307 400 -
ChrX	stalkie_big_nohaplotig	exon	55707167	55707472	99	+	.	Parent=comp150438_c0_seq1.mrna2;Target=comp150438_c0_seq1 1 306 -
ChrX	stalkie_big_nohaplotig	CDS	55707102	55707104	.	+	0	Parent=comp150438_c0_seq1.mrna2;Target=comp150438_c0_seq1 307 309 .
ChrX	stalkie_big_nohaplotig	CDS	55707167	55707424	.	+	0	Parent=comp150438_c0_seq1.mrna2;Target=comp150438_c0_seq1 49 306 .
ChrX	gffcl	locus	55781047	55782462	.	-	.	ID=RLOC_00003216;geneIDs=ORF919.path1;transcripts=ORF919.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55781047	55782462	.	-	.	ID=ORF919.mrna1;geneID=ORF919.path1;Name=ORF919;Dir=sensecoverage=100.0;identity=98.7;matches=1329;mismatches=18;indels=0;unknowns=0;locus=RLOC_00003216
ChrX	stalkie_big_nohaplotig	exon	55781047	55782318	98	-	.	Parent=ORF919.mrna1;Target=ORF919 76 1347 +
ChrX	stalkie_big_nohaplotig	exon	55782388	55782462	100	-	.	Parent=ORF919.mrna1;Target=ORF919 1 75 +
ChrX	stalkie_big_nohaplotig	CDS	55781047	55782318	.	-	0	Parent=ORF919.mrna1;Target=ORF919 76 1347 +
ChrX	stalkie_big_nohaplotig	CDS	55782388	55782462	.	-	0	Parent=ORF919.mrna1;Target=ORF919 1 75 +
ChrX	gffcl	locus	55786905	55808092	.	.	.	ID=RLOC_00003217;geneIDs=FBgn0032535.1.path1,comp145741_c0_seq1.path1,comp160075_c0_seq1.path1;transcripts=comp160075_c0_seq1.mrna1,FBgn0032535.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55786905	55808092	.	+	.	ID=comp160075_c0_seq1.mrna1;geneID=comp160075_c0_seq1.path1;Name=comp160075_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.7;matches=2263;mismatches=6;indels=0;unknowns=0;locus=RLOC_00003217
ChrX	stalkie_big_nohaplotig	exon	55786905	55787093	100	+	.	Parent=comp160075_c0_seq1.mrna1;Target=comp160075_c0_seq1 191 3 .
ChrX	stalkie_big_nohaplotig	exon	55787158	55787330	99	+	.	Parent=comp160075_c0_seq1.mrna1;Target=comp160075_c0_seq1 364 192 .
ChrX	stalkie_big_nohaplotig	exon	55787397	55787539	99	+	.	Parent=comp160075_c0_seq1.mrna1;Target=comp160075_c0_seq1 507 365 .
ChrX	stalkie_big_nohaplotig	exon	55787680	55787889	99	+	.	Parent=comp160075_c0_seq1.mrna1;Target=comp160075_c0_seq1 717 508 .
ChrX	stalkie_big_nohaplotig	exon	55800564	55800927	100	+	.	Parent=comp160075_c0_seq1.mrna1;Target=comp160075_c0_seq1 1081 718 .
ChrX	stalkie_big_nohaplotig	exon	55800992	55801417	100	+	.	Parent=comp160075_c0_seq1.mrna1;Target=comp160075_c0_seq1 1507 1082 .
ChrX	stalkie_big_nohaplotig	exon	55801471	55802183	99	+	.	Parent=comp160075_c0_seq1.mrna1;Target=comp160075_c0_seq1 2220 1508 .
ChrX	stalkie_big_nohaplotig	exon	55808042	55808092	100	+	.	Parent=comp160075_c0_seq1.mrna1;Target=comp160075_c0_seq1 2271 2221 .
ChrX	stalkie_big_nohaplotig	CDS	55800822	55800927	.	+	0	Parent=comp160075_c0_seq1.mrna1;Target=comp160075_c0_seq1 1081 976 .
ChrX	stalkie_big_nohaplotig	CDS	55800992	55801068	.	+	2	Parent=comp160075_c0_seq1.mrna1;Target=comp160075_c0_seq1 1158 1082 .
ChrX	stalkie_big_nohaplotig	mRNA	55787156	55802182	.	-	.	ID=FBgn0032535.1.mrna1;geneID=FBgn0032535.1.path1;Name=FBgn0032535.1;Dir=indeterminatecoverage=99.2;identity=99.6;matches=1955;mismatches=5;indels=2;unknowns=1;locus=RLOC_00003217
ChrX	stalkie_big_nohaplotig	exon	55787156	55787330	99	-	.	Parent=FBgn0032535.1.mrna1;Target=FBgn0032535.1 1968 1794 .
ChrX	stalkie_big_nohaplotig	exon	55787397	55787537	99	-	.	Parent=FBgn0032535.1.mrna1;Target=FBgn0032535.1 1793 1653 .
ChrX	stalkie_big_nohaplotig	exon	55787678	55787889	99	-	.	Parent=FBgn0032535.1.mrna1;Target=FBgn0032535.1 1652 1441 .
ChrX	stalkie_big_nohaplotig	exon	55800564	55800927	100	-	.	Parent=FBgn0032535.1.mrna1;Target=FBgn0032535.1 1440 1077 .
ChrX	stalkie_big_nohaplotig	exon	55800992	55801417	99	-	.	Parent=FBgn0032535.1.mrna1;Target=FBgn0032535.1 1076 652 .
ChrX	stalkie_big_nohaplotig	exon	55801471	55802018	99	-	.	Parent=FBgn0032535.1.mrna1;Target=FBgn0032535.1 651 103 .
ChrX	stalkie_big_nohaplotig	exon	55802087	55802182	98	-	.	Parent=FBgn0032535.1.mrna1;Target=FBgn0032535.1 102 7 .
ChrX	stalkie_big_nohaplotig	CDS	55787156	55787330	.	-	1	Parent=FBgn0032535.1.mrna1;Target=FBgn0032535.1 1968 1794 .
ChrX	stalkie_big_nohaplotig	CDS	55787397	55787537	.	-	1	Parent=FBgn0032535.1.mrna1;Target=FBgn0032535.1 1793 1653 .
ChrX	stalkie_big_nohaplotig	CDS	55787678	55787889	.	-	0	Parent=FBgn0032535.1.mrna1;Target=FBgn0032535.1 1652 1441 .
ChrX	stalkie_big_nohaplotig	CDS	55800564	55800890	.	-	0	Parent=FBgn0032535.1.mrna1;Target=FBgn0032535.1 1440 1114 .
ChrX	gffcl	locus	55789675	55790251	.	-	.	ID=RLOC_00003218;geneIDs=comp155200_c0_seq1.path1;transcripts=comp155200_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55789675	55790251	.	-	.	ID=comp155200_c0_seq1.mrna1;geneID=comp155200_c0_seq1.path1;Name=comp155200_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=577;mismatches=0;indels=0;unknowns=0;Target=comp155200_c0_seq1 577 1 .;CDS_Target=comp155200_c0_seq1 144 1 .;locus=RLOC_00003218
ChrX	stalkie_big_nohaplotig	exon	55789675	55790251	100	-	.	Parent=comp155200_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	55790108	55790251	.	-	0	Parent=comp155200_c0_seq1.mrna1
ChrX	gffcl	locus	55793781	55795583	.	+	.	ID=RLOC_00003219;geneIDs=FBgn0039691.1.path1;transcripts=FBgn0039691.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55793781	55795583	.	+	.	ID=FBgn0039691.1.mrna1;geneID=FBgn0039691.1.path1;Name=FBgn0039691.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1801;mismatches=2;indels=0;unknowns=0;Target=FBgn0039691.1 1803 1 .;locus=RLOC_00003219
ChrX	stalkie_big_nohaplotig	exon	55793781	55795583	99	+	.	Parent=FBgn0039691.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	55793781	55795583	.	+	0	Parent=FBgn0039691.1.mrna1
ChrX	gffcl	locus	55799480	55800212	.	+	.	ID=RLOC_00003220;geneIDs=comp152492_c0_seq1.path1;transcripts=comp152492_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55799480	55800212	.	+	.	ID=comp152492_c0_seq1.mrna1;geneID=comp152492_c0_seq1.path1;Name=comp152492_c0_seq1;Dir=indeterminatecoverage=98.0;identity=97.2;matches=732;mismatches=1;indels=20;unknowns=0;Target=comp152492_c0_seq1 768 16 .;CDS_Target=comp152492_c0_seq1 257 18 .;locus=RLOC_00003220
ChrX	stalkie_big_nohaplotig	exon	55799480	55800212	97	+	.	Parent=comp152492_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	55799482	55799701	.	+	0	Parent=comp152492_c0_seq1.mrna1
ChrX	gffcl	locus	55820204	55846929	.	-	.	ID=RLOC_00003221;geneIDs=FBgn0012037.1.path1;transcripts=FBgn0012037.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55820204	55846929	.	-	.	ID=FBgn0012037.1.mrna1;geneID=FBgn0012037.1.path1;Name=FBgn0012037.1;Dir=sensecoverage=99.3;identity=100.0;matches=1978;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003221
ChrX	stalkie_big_nohaplotig	exon	55820204	55820376	100	-	.	Parent=FBgn0012037.1.mrna1;Target=FBgn0012037.1 1806 1978 +
ChrX	stalkie_big_nohaplotig	exon	55820434	55820574	100	-	.	Parent=FBgn0012037.1.mrna1;Target=FBgn0012037.1 1665 1805 +
ChrX	stalkie_big_nohaplotig	exon	55822740	55822954	100	-	.	Parent=FBgn0012037.1.mrna1;Target=FBgn0012037.1 1450 1664 +
ChrX	stalkie_big_nohaplotig	exon	55823023	55823374	100	-	.	Parent=FBgn0012037.1.mrna1;Target=FBgn0012037.1 1098 1449 +
ChrX	stalkie_big_nohaplotig	exon	55823438	55823801	100	-	.	Parent=FBgn0012037.1.mrna1;Target=FBgn0012037.1 734 1097 +
ChrX	stalkie_big_nohaplotig	exon	55823874	55824420	100	-	.	Parent=FBgn0012037.1.mrna1;Target=FBgn0012037.1 187 733 +
ChrX	stalkie_big_nohaplotig	exon	55825615	55825662	100	-	.	Parent=FBgn0012037.1.mrna1;Target=FBgn0012037.1 139 186 +
ChrX	stalkie_big_nohaplotig	exon	55846792	55846929	100	-	.	Parent=FBgn0012037.1.mrna1;Target=FBgn0012037.1 1 138 +
ChrX	stalkie_big_nohaplotig	CDS	55820205	55820376	.	-	1	Parent=FBgn0012037.1.mrna1;Target=FBgn0012037.1 1806 1977 +
ChrX	stalkie_big_nohaplotig	CDS	55820434	55820574	.	-	1	Parent=FBgn0012037.1.mrna1;Target=FBgn0012037.1 1665 1805 +
ChrX	stalkie_big_nohaplotig	CDS	55822740	55822954	.	-	0	Parent=FBgn0012037.1.mrna1;Target=FBgn0012037.1 1450 1664 +
ChrX	stalkie_big_nohaplotig	CDS	55823023	55823374	.	-	1	Parent=FBgn0012037.1.mrna1;Target=FBgn0012037.1 1098 1449 +
ChrX	stalkie_big_nohaplotig	CDS	55823438	55823801	.	-	2	Parent=FBgn0012037.1.mrna1;Target=FBgn0012037.1 734 1097 +
ChrX	stalkie_big_nohaplotig	CDS	55823874	55824420	.	-	0	Parent=FBgn0012037.1.mrna1;Target=FBgn0012037.1 187 733 +
ChrX	stalkie_big_nohaplotig	CDS	55825615	55825662	.	-	0	Parent=FBgn0012037.1.mrna1;Target=FBgn0012037.1 139 186 +
ChrX	stalkie_big_nohaplotig	CDS	55846792	55846929	.	-	0	Parent=FBgn0012037.1.mrna1;Target=FBgn0012037.1 1 138 +
ChrX	gffcl	locus	55821046	55821645	.	-	.	ID=RLOC_00003222;geneIDs=comp149668_c0_seq1.path1;transcripts=comp149668_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55821046	55821645	.	-	.	ID=comp149668_c0_seq1.mrna1;geneID=comp149668_c0_seq1.path1;Name=comp149668_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=600;mismatches=0;indels=0;unknowns=0;Target=comp149668_c0_seq1 600 1 .;CDS_Target=comp149668_c0_seq1 298 2 .;locus=RLOC_00003222
ChrX	stalkie_big_nohaplotig	exon	55821046	55821645	100	-	.	Parent=comp149668_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	55821348	55821644	.	-	0	Parent=comp149668_c0_seq1.mrna1
ChrX	gffcl	locus	55857628	55858400	.	+	.	ID=RLOC_00003224;geneIDs=comp142434_c1_seq1.path1;transcripts=comp142434_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55857628	55858400	.	+	.	ID=comp142434_c1_seq1.mrna1;geneID=comp142434_c1_seq1.path1;Name=comp142434_c1_seq1;Dir=sensecoverage=57.0;identity=99.7;matches=632;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003224
ChrX	stalkie_big_nohaplotig	exon	55857628	55858001	99	+	.	Parent=comp142434_c1_seq1.mrna1;Target=comp142434_c1_seq1 416 789 +
ChrX	stalkie_big_nohaplotig	exon	55858081	55858212	100	+	.	Parent=comp142434_c1_seq1.mrna1;Target=comp142434_c1_seq1 790 921 +
ChrX	stalkie_big_nohaplotig	exon	55858273	55858400	100	+	.	Parent=comp142434_c1_seq1.mrna1;Target=comp142434_c1_seq1 922 1049 +
ChrX	stalkie_big_nohaplotig	CDS	55857758	55858001	.	+	0	Parent=comp142434_c1_seq1.mrna1;Target=comp142434_c1_seq1 546 789 +
ChrX	stalkie_big_nohaplotig	CDS	55858081	55858112	.	+	2	Parent=comp142434_c1_seq1.mrna1;Target=comp142434_c1_seq1 790 821 +
ChrX	gffcl	locus	55862189	55866736	.	-	.	ID=RLOC_00003225;geneIDs=FBgn0016122.1.path1;transcripts=FBgn0016122.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55862189	55866736	.	-	.	ID=FBgn0016122.1.mrna1;geneID=FBgn0016122.1.path1;Name=FBgn0016122.1;Dir=sensecoverage=100.0;identity=99.6;matches=1966;mismatches=8;indels=0;unknowns=0;locus=RLOC_00003225
ChrX	stalkie_big_nohaplotig	exon	55862189	55862223	100	-	.	Parent=FBgn0016122.1.mrna1;Target=FBgn0016122.1 1940 1974 +
ChrX	stalkie_big_nohaplotig	exon	55862294	55862466	100	-	.	Parent=FBgn0016122.1.mrna1;Target=FBgn0016122.1 1767 1939 +
ChrX	stalkie_big_nohaplotig	exon	55862538	55862893	99	-	.	Parent=FBgn0016122.1.mrna1;Target=FBgn0016122.1 1411 1766 +
ChrX	stalkie_big_nohaplotig	exon	55862970	55863682	100	-	.	Parent=FBgn0016122.1.mrna1;Target=FBgn0016122.1 698 1410 +
ChrX	stalkie_big_nohaplotig	exon	55865956	55866514	99	-	.	Parent=FBgn0016122.1.mrna1;Target=FBgn0016122.1 139 697 +
ChrX	stalkie_big_nohaplotig	exon	55866599	55866736	99	-	.	Parent=FBgn0016122.1.mrna1;Target=FBgn0016122.1 1 138 +
ChrX	stalkie_big_nohaplotig	CDS	55862189	55862223	.	-	2	Parent=FBgn0016122.1.mrna1;Target=FBgn0016122.1 1940 1974 +
ChrX	stalkie_big_nohaplotig	CDS	55862294	55862466	.	-	1	Parent=FBgn0016122.1.mrna1;Target=FBgn0016122.1 1767 1939 +
ChrX	stalkie_big_nohaplotig	CDS	55862538	55862893	.	-	0	Parent=FBgn0016122.1.mrna1;Target=FBgn0016122.1 1411 1766 +
ChrX	stalkie_big_nohaplotig	CDS	55862970	55863682	.	-	2	Parent=FBgn0016122.1.mrna1;Target=FBgn0016122.1 698 1410 +
ChrX	stalkie_big_nohaplotig	CDS	55865956	55866514	.	-	0	Parent=FBgn0016122.1.mrna1;Target=FBgn0016122.1 139 697 +
ChrX	stalkie_big_nohaplotig	CDS	55866599	55866736	.	-	0	Parent=FBgn0016122.1.mrna1;Target=FBgn0016122.1 1 138 +
ChrX	gffcl	locus	55869831	55871693	.	-	.	ID=RLOC_00003226;geneIDs=comp157389_c0_seq1.path1;transcripts=comp157389_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55869831	55871693	.	-	.	ID=comp157389_c0_seq1.mrna1;geneID=comp157389_c0_seq1.path1;Name=comp157389_c0_seq1;Dir=sensecoverage=100.0;identity=94.1;matches=1717;mismatches=60;indels=48;unknowns=0;Target=comp157389_c0_seq1 1592 1621 +;locus=RLOC_00003226
ChrX	stalkie_big_nohaplotig	exon	55869831	55870413	90	-	.	Parent=comp157389_c0_seq1.mrna1;Target=comp157389_c0_seq1 1222 1816 +
ChrX	stalkie_big_nohaplotig	exon	55870491	55871693	95	-	.	Parent=comp157389_c0_seq1.mrna1;Target=comp157389_c0_seq1 1 1221 +
ChrX	stalkie_big_nohaplotig	CDS	55870025	55870052	.	-	0	Parent=comp157389_c0_seq1.mrna1
ChrX	gffcl	locus	55876307	55881592	.	+	.	ID=RLOC_00003227;geneIDs=comp117958_c0_seq1.path1;transcripts=comp117958_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55876307	55881592	.	+	.	ID=comp117958_c0_seq1.mrna1;geneID=comp117958_c0_seq1.path1;Name=comp117958_c0_seq1;Dir=sensecoverage=99.8;identity=99.3;matches=561;mismatches=3;indels=1;unknowns=0;Target=comp117958_c0_seq1 2 112 +;locus=RLOC_00003227
ChrX	stalkie_big_nohaplotig	exon	55876307	55876635	99	+	.	Parent=comp117958_c0_seq1.mrna1;Target=comp117958_c0_seq1 1 330 +
ChrX	stalkie_big_nohaplotig	exon	55881358	55881592	98	+	.	Parent=comp117958_c0_seq1.mrna1;Target=comp117958_c0_seq1 331 565 +
ChrX	stalkie_big_nohaplotig	CDS	55876308	55876418	.	+	0	Parent=comp117958_c0_seq1.mrna1
ChrX	gffcl	locus	55881740	56306226	.	+	.	ID=RLOC_00003228;geneIDs=FBgn0028509.1.path1;transcripts=FBgn0028509.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	55881740	56306226	.	+	.	ID=FBgn0028509.1.mrna1;geneID=FBgn0028509.1.path1;Name=FBgn0028509.1;Dir=sensecoverage=100.0;identity=100.0;matches=3333;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003228
ChrX	stalkie_big_nohaplotig	exon	55881740	55882133	100	+	.	Parent=FBgn0028509.1.mrna1;Target=FBgn0028509.1 1 394 +
ChrX	stalkie_big_nohaplotig	exon	56279189	56279421	100	+	.	Parent=FBgn0028509.1.mrna1;Target=FBgn0028509.1 395 627 +
ChrX	stalkie_big_nohaplotig	exon	56299871	56300012	100	+	.	Parent=FBgn0028509.1.mrna1;Target=FBgn0028509.1 628 769 +
ChrX	stalkie_big_nohaplotig	exon	56301057	56301191	100	+	.	Parent=FBgn0028509.1.mrna1;Target=FBgn0028509.1 770 904 +
ChrX	stalkie_big_nohaplotig	exon	56301268	56302758	100	+	.	Parent=FBgn0028509.1.mrna1;Target=FBgn0028509.1 905 2395 +
ChrX	stalkie_big_nohaplotig	exon	56302822	56302939	100	+	.	Parent=FBgn0028509.1.mrna1;Target=FBgn0028509.1 2396 2513 +
ChrX	stalkie_big_nohaplotig	exon	56305270	56305488	100	+	.	Parent=FBgn0028509.1.mrna1;Target=FBgn0028509.1 2514 2732 +
ChrX	stalkie_big_nohaplotig	exon	56305561	56305708	100	+	.	Parent=FBgn0028509.1.mrna1;Target=FBgn0028509.1 2733 2880 +
ChrX	stalkie_big_nohaplotig	exon	56305774	56306226	100	+	.	Parent=FBgn0028509.1.mrna1;Target=FBgn0028509.1 2881 3333 +
ChrX	stalkie_big_nohaplotig	CDS	55881740	55882133	.	+	0	Parent=FBgn0028509.1.mrna1;Target=FBgn0028509.1 1 394 +
ChrX	stalkie_big_nohaplotig	CDS	56279189	56279421	.	+	2	Parent=FBgn0028509.1.mrna1;Target=FBgn0028509.1 395 627 +
ChrX	stalkie_big_nohaplotig	CDS	56299871	56300012	.	+	0	Parent=FBgn0028509.1.mrna1;Target=FBgn0028509.1 628 769 +
ChrX	stalkie_big_nohaplotig	CDS	56301057	56301191	.	+	2	Parent=FBgn0028509.1.mrna1;Target=FBgn0028509.1 770 904 +
ChrX	stalkie_big_nohaplotig	CDS	56301268	56302758	.	+	2	Parent=FBgn0028509.1.mrna1;Target=FBgn0028509.1 905 2395 +
ChrX	stalkie_big_nohaplotig	CDS	56302822	56302939	.	+	2	Parent=FBgn0028509.1.mrna1;Target=FBgn0028509.1 2396 2513 +
ChrX	stalkie_big_nohaplotig	CDS	56305270	56305488	.	+	1	Parent=FBgn0028509.1.mrna1;Target=FBgn0028509.1 2514 2732 +
ChrX	stalkie_big_nohaplotig	CDS	56305561	56305708	.	+	1	Parent=FBgn0028509.1.mrna1;Target=FBgn0028509.1 2733 2880 +
ChrX	stalkie_big_nohaplotig	CDS	56305774	56306226	.	+	0	Parent=FBgn0028509.1.mrna1;Target=FBgn0028509.1 2881 3333 +
ChrX	gffcl	locus	56013166	56015075	.	+	.	ID=RLOC_00003229;geneIDs=ORF1864.path1;transcripts=ORF1864.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56013166	56015075	.	+	.	ID=ORF1864.mrna1;geneID=ORF1864.path1;Name=ORF1864;Dir=sensecoverage=100.0;identity=99.3;matches=971;mismatches=7;indels=0;unknowns=0;locus=RLOC_00003229
ChrX	stalkie_big_nohaplotig	exon	56013166	56013210	97	+	.	Parent=ORF1864.mrna1;Target=ORF1864 1 45 +
ChrX	stalkie_big_nohaplotig	exon	56014143	56015075	99	+	.	Parent=ORF1864.mrna1;Target=ORF1864 46 978 +
ChrX	stalkie_big_nohaplotig	CDS	56013166	56013210	.	+	0	Parent=ORF1864.mrna1;Target=ORF1864 1 45 +
ChrX	stalkie_big_nohaplotig	CDS	56014143	56015075	.	+	0	Parent=ORF1864.mrna1;Target=ORF1864 46 978 +
ChrX	gffcl	locus	56017199	56017660	.	-	.	ID=RLOC_00003230;geneIDs=comp150438_c0_seq1.path1;transcripts=comp150438_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56017199	56017660	.	-	.	ID=comp150438_c0_seq1.mrna1;geneID=comp150438_c0_seq1.path1;Name=comp150438_c0_seq1;Dir=antisensecoverage=99.8;identity=99.0;matches=396;mismatches=4;indels=0;unknowns=0;locus=RLOC_00003230
ChrX	stalkie_big_nohaplotig	exon	56017199	56017504	99	-	.	Parent=comp150438_c0_seq1.mrna1;Target=comp150438_c0_seq1 1 306 -
ChrX	stalkie_big_nohaplotig	exon	56017567	56017660	97	-	.	Parent=comp150438_c0_seq1.mrna1;Target=comp150438_c0_seq1 307 400 -
ChrX	stalkie_big_nohaplotig	CDS	56017247	56017504	.	-	0	Parent=comp150438_c0_seq1.mrna1;Target=comp150438_c0_seq1 49 306 .
ChrX	stalkie_big_nohaplotig	CDS	56017567	56017569	.	-	0	Parent=comp150438_c0_seq1.mrna1;Target=comp150438_c0_seq1 307 309 .
ChrX	gffcl	locus	56027638	56029334	.	-	.	ID=RLOC_00003231;geneIDs=ORF827.path1;transcripts=ORF827.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56027638	56029334	.	-	.	ID=ORF827.mrna1;geneID=ORF827.path1;Name=ORF827;Dir=sensecoverage=100.0;identity=99.4;matches=1395;mismatches=9;indels=0;unknowns=0;locus=RLOC_00003231
ChrX	stalkie_big_nohaplotig	exon	56027638	56028843	99	-	.	Parent=ORF827.mrna1;Target=ORF827 199 1404 +
ChrX	stalkie_big_nohaplotig	exon	56028908	56028967	96	-	.	Parent=ORF827.mrna1;Target=ORF827 139 198 +
ChrX	stalkie_big_nohaplotig	exon	56029030	56029092	98	-	.	Parent=ORF827.mrna1;Target=ORF827 76 138 +
ChrX	stalkie_big_nohaplotig	exon	56029190	56029222	100	-	.	Parent=ORF827.mrna1;Target=ORF827 43 75 +
ChrX	stalkie_big_nohaplotig	exon	56029293	56029334	100	-	.	Parent=ORF827.mrna1;Target=ORF827 1 42 +
ChrX	stalkie_big_nohaplotig	CDS	56027638	56028843	.	-	0	Parent=ORF827.mrna1;Target=ORF827 199 1404 +
ChrX	stalkie_big_nohaplotig	CDS	56028908	56028967	.	-	0	Parent=ORF827.mrna1;Target=ORF827 139 198 +
ChrX	stalkie_big_nohaplotig	CDS	56029030	56029092	.	-	0	Parent=ORF827.mrna1;Target=ORF827 76 138 +
ChrX	stalkie_big_nohaplotig	CDS	56029190	56029222	.	-	0	Parent=ORF827.mrna1;Target=ORF827 43 75 +
ChrX	stalkie_big_nohaplotig	CDS	56029293	56029334	.	-	0	Parent=ORF827.mrna1;Target=ORF827 1 42 +
ChrX	gffcl	locus	56066301	56069684	.	-	.	ID=RLOC_00003232;geneIDs=FBgn0028920.2.path1;transcripts=FBgn0028920.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56066301	56069684	.	-	.	ID=FBgn0028920.2.mrna1;geneID=FBgn0028920.2.path1;Name=FBgn0028920.2;Dir=sensecoverage=100.0;identity=100.0;matches=825;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003232
ChrX	stalkie_big_nohaplotig	exon	56066301	56067022	100	-	.	Parent=FBgn0028920.2.mrna1;Target=FBgn0028920.2 104 825 +
ChrX	stalkie_big_nohaplotig	exon	56069582	56069684	100	-	.	Parent=FBgn0028920.2.mrna1;Target=FBgn0028920.2 1 103 +
ChrX	stalkie_big_nohaplotig	CDS	56066301	56067022	.	-	2	Parent=FBgn0028920.2.mrna1;Target=FBgn0028920.2 104 825 +
ChrX	stalkie_big_nohaplotig	CDS	56069582	56069684	.	-	0	Parent=FBgn0028920.2.mrna1;Target=FBgn0028920.2 1 103 +
ChrX	gffcl	locus	56077375	56078835	.	-	.	ID=RLOC_00003233;geneIDs=FBgn0028920.1.path1;transcripts=FBgn0028920.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56077375	56078835	.	-	.	ID=FBgn0028920.1.mrna1;geneID=FBgn0028920.1.path1;Name=FBgn0028920.1;Dir=sensecoverage=100.0;identity=100.0;matches=783;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003233
ChrX	stalkie_big_nohaplotig	exon	56077375	56078075	100	-	.	Parent=FBgn0028920.1.mrna1;Target=FBgn0028920.1 83 783 +
ChrX	stalkie_big_nohaplotig	exon	56078754	56078835	100	-	.	Parent=FBgn0028920.1.mrna1;Target=FBgn0028920.1 1 82 +
ChrX	stalkie_big_nohaplotig	CDS	56077375	56078075	.	-	2	Parent=FBgn0028920.1.mrna1;Target=FBgn0028920.1 83 783 +
ChrX	stalkie_big_nohaplotig	CDS	56078754	56078835	.	-	0	Parent=FBgn0028920.1.mrna1;Target=FBgn0028920.1 1 82 +
ChrX	gffcl	locus	56098469	56099562	.	+	.	ID=RLOC_00003234;geneIDs=FBgn0028533.1.path1;transcripts=FBgn0028533.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56098469	56099562	.	+	.	ID=FBgn0028533.1.mrna1;geneID=FBgn0028533.1.path1;Name=FBgn0028533.1;Dir=sensecoverage=100.0;identity=100.0;matches=957;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003234
ChrX	stalkie_big_nohaplotig	exon	56098469	56098679	100	+	.	Parent=FBgn0028533.1.mrna1;Target=FBgn0028533.1 1 211 +
ChrX	stalkie_big_nohaplotig	exon	56098756	56098909	100	+	.	Parent=FBgn0028533.1.mrna1;Target=FBgn0028533.1 212 365 +
ChrX	stalkie_big_nohaplotig	exon	56098971	56099562	100	+	.	Parent=FBgn0028533.1.mrna1;Target=FBgn0028533.1 366 957 +
ChrX	stalkie_big_nohaplotig	CDS	56098469	56098679	.	+	0	Parent=FBgn0028533.1.mrna1;Target=FBgn0028533.1 1 211 +
ChrX	stalkie_big_nohaplotig	CDS	56098756	56098909	.	+	2	Parent=FBgn0028533.1.mrna1;Target=FBgn0028533.1 212 365 +
ChrX	stalkie_big_nohaplotig	CDS	56098971	56099562	.	+	1	Parent=FBgn0028533.1.mrna1;Target=FBgn0028533.1 366 957 +
ChrX	gffcl	locus	56103764	56104655	.	+	.	ID=RLOC_00003235;geneIDs=FBgn0028532.1.path1;transcripts=FBgn0028532.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56103764	56104655	.	+	.	ID=FBgn0028532.1.mrna1;geneID=FBgn0028532.1.path1;Name=FBgn0028532.1;Dir=sensecoverage=100.0;identity=100.0;matches=816;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003235
ChrX	stalkie_big_nohaplotig	exon	56103764	56104032	100	+	.	Parent=FBgn0028532.1.mrna1;Target=FBgn0028532.1 1 269 +
ChrX	stalkie_big_nohaplotig	exon	56104109	56104655	100	+	.	Parent=FBgn0028532.1.mrna1;Target=FBgn0028532.1 270 816 +
ChrX	stalkie_big_nohaplotig	CDS	56103764	56104032	.	+	0	Parent=FBgn0028532.1.mrna1;Target=FBgn0028532.1 1 269 +
ChrX	stalkie_big_nohaplotig	CDS	56104109	56104655	.	+	1	Parent=FBgn0028532.1.mrna1;Target=FBgn0028532.1 270 816 +
ChrX	gffcl	locus	56121368	56122387	.	+	.	ID=RLOC_00003236;geneIDs=ORF1854.path1;transcripts=ORF1854.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56121368	56122387	.	+	.	ID=ORF1854.mrna1;geneID=ORF1854.path1;Name=ORF1854;Dir=indeterminatecoverage=100.0;identity=93.5;matches=954;mismatches=27;indels=39;unknowns=0;Target=ORF1854 981 1 .;locus=RLOC_00003236
ChrX	stalkie_big_nohaplotig	exon	56121368	56122387	93	+	.	Parent=ORF1854.mrna1
ChrX	stalkie_big_nohaplotig	CDS	56121368	56122387	.	+	0	Parent=ORF1854.mrna1
ChrX	gffcl	locus	56131623	56132185	.	-	.	ID=RLOC_00003237;geneIDs=comp134992_c0_seq1.path1;transcripts=comp134992_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56131623	56132185	.	-	.	ID=comp134992_c0_seq1.mrna1;geneID=comp134992_c0_seq1.path1;Name=comp134992_c0_seq1;Dir=sensecoverage=97.7;identity=99.4;matches=504;mismatches=0;indels=3;unknowns=0;locus=RLOC_00003237
ChrX	stalkie_big_nohaplotig	exon	56131623	56131803	100	-	.	Parent=comp134992_c0_seq1.mrna1;Target=comp134992_c0_seq1 325 505 +
ChrX	stalkie_big_nohaplotig	exon	56131860	56132185	99	-	.	Parent=comp134992_c0_seq1.mrna1;Target=comp134992_c0_seq1 2 324 +
ChrX	stalkie_big_nohaplotig	CDS	56131799	56131803	.	-	2	Parent=comp134992_c0_seq1.mrna1;Target=comp134992_c0_seq1 325 329 +
ChrX	stalkie_big_nohaplotig	CDS	56131860	56132064	.	-	0	Parent=comp134992_c0_seq1.mrna1;Target=comp134992_c0_seq1 120 324 +
ChrX	gffcl	locus	56144969	56145496	.	+	.	ID=RLOC_00003238;geneIDs=comp149899_c0_seq1.path1;transcripts=comp149899_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56144969	56145496	.	+	.	ID=comp149899_c0_seq1.mrna1;geneID=comp149899_c0_seq1.path1;Name=comp149899_c0_seq1;Dir=sensecoverage=100.0;identity=97.9;matches=459;mismatches=10;indels=0;unknowns=0;Target=comp149899_c0_seq1 124 375 +;locus=RLOC_00003238
ChrX	stalkie_big_nohaplotig	exon	56144969	56145081	95	+	.	Parent=comp149899_c0_seq1.mrna1;Target=comp149899_c0_seq1 1 113 +
ChrX	stalkie_big_nohaplotig	exon	56145141	56145496	98	+	.	Parent=comp149899_c0_seq1.mrna1;Target=comp149899_c0_seq1 114 469 +
ChrX	stalkie_big_nohaplotig	CDS	56145151	56145402	.	+	0	Parent=comp149899_c0_seq1.mrna1
ChrX	gffcl	locus	56211475	56212146	.	-	.	ID=RLOC_00003239;geneIDs=comp109885_c0_seq1.path1;transcripts=comp109885_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56211475	56212146	.	-	.	ID=comp109885_c0_seq1.mrna1;geneID=comp109885_c0_seq1.path1;Name=comp109885_c0_seq1;Dir=indeterminatecoverage=99.0;identity=100.0;matches=672;mismatches=0;indels=0;unknowns=0;Target=comp109885_c0_seq1 673 2 .;CDS_Target=comp109885_c0_seq1 261 88 .;locus=RLOC_00003239
ChrX	stalkie_big_nohaplotig	exon	56211475	56212146	100	-	.	Parent=comp109885_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	56211887	56212060	.	-	0	Parent=comp109885_c0_seq1.mrna1
ChrX	gffcl	locus	56304210	56305076	.	+	.	ID=RLOC_00003240;geneIDs=comp131280_c1_seq1.path1;transcripts=comp131280_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56304210	56305076	.	+	.	ID=comp131280_c1_seq1.mrna1;geneID=comp131280_c1_seq1.path1;Name=comp131280_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=389;mismatches=5;indels=0;unknowns=0;Target=comp131280_c1_seq1 211 83 .;locus=RLOC_00003240
ChrX	stalkie_big_nohaplotig	exon	56304210	56304568	99	+	.	Parent=comp131280_c1_seq1.mrna1;Target=comp131280_c1_seq1 359 1 .
ChrX	stalkie_big_nohaplotig	exon	56305042	56305076	91	+	.	Parent=comp131280_c1_seq1.mrna1;Target=comp131280_c1_seq1 394 360 .
ChrX	stalkie_big_nohaplotig	CDS	56304292	56304420	.	+	0	Parent=comp131280_c1_seq1.mrna1
ChrX	gffcl	locus	56309935	56310262	.	+	.	ID=RLOC_00003241;geneIDs=comp151391_c1_seq1.path1;transcripts=comp151391_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56309935	56310262	.	+	.	ID=comp151391_c1_seq1.mrna1;geneID=comp151391_c1_seq1.path1;Name=comp151391_c1_seq1;Dir=indeterminatecoverage=93.0;identity=93.7;matches=313;mismatches=15;indels=6;unknowns=0;Target=comp151391_c1_seq1 359 26 .;CDS_Target=comp151391_c1_seq1 128 105 .;locus=RLOC_00003241
ChrX	stalkie_big_nohaplotig	exon	56309935	56310262	93	+	.	Parent=comp151391_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	56310014	56310037	.	+	0	Parent=comp151391_c1_seq1.mrna1
ChrX	gffcl	locus	56310512	56310910	.	-	.	ID=RLOC_00003242;geneIDs=comp116477_c0_seq1.path1,comp687541_c0_seq1.path1;transcripts=comp116477_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56310512	56310726	.	-	.	ID=comp116477_c0_seq1.mrna1;geneID=comp116477_c0_seq1.path1;Name=comp116477_c0_seq1;Dir=indeterminatecoverage=99.5;identity=93.5;matches=201;mismatches=13;indels=1;unknowns=0;Target=comp116477_c0_seq1 214 1 .;CDS_Target=comp116477_c0_seq1 84 1 .;locus=RLOC_00003242
ChrX	stalkie_big_nohaplotig	exon	56310512	56310726	93	-	.	Parent=comp116477_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	56310643	56310726	.	-	0	Parent=comp116477_c0_seq1.mrna1
ChrX	gffcl	locus	56311218	56312267	.	-	.	ID=RLOC_00003243;geneIDs=comp160473_c0_seq1.path1;transcripts=comp160473_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56311218	56312267	.	-	.	ID=comp160473_c0_seq1.mrna1;geneID=comp160473_c0_seq1.path1;Name=comp160473_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.0;matches=1040;mismatches=10;indels=0;unknowns=0;Target=comp160473_c0_seq1 1050 1 .;CDS_Target=comp160473_c0_seq1 691 596 .;locus=RLOC_00003243
ChrX	stalkie_big_nohaplotig	exon	56311218	56312267	99	-	.	Parent=comp160473_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	56311577	56311672	.	-	0	Parent=comp160473_c0_seq1.mrna1
ChrX	gffcl	locus	56316945	56318942	.	-	.	ID=RLOC_00003244;geneIDs=FBgn0039713.2.path1;transcripts=FBgn0039713.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56316945	56318942	.	-	.	ID=FBgn0039713.2.mrna1;geneID=FBgn0039713.2.path1;Name=FBgn0039713.2;Dir=sensecoverage=100.0;identity=100.0;matches=726;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003244
ChrX	stalkie_big_nohaplotig	exon	56316945	56317045	100	-	.	Parent=FBgn0039713.2.mrna1;Target=FBgn0039713.2 626 726 +
ChrX	stalkie_big_nohaplotig	exon	56317321	56317732	100	-	.	Parent=FBgn0039713.2.mrna1;Target=FBgn0039713.2 214 625 +
ChrX	stalkie_big_nohaplotig	exon	56318356	56318462	100	-	.	Parent=FBgn0039713.2.mrna1;Target=FBgn0039713.2 107 213 +
ChrX	stalkie_big_nohaplotig	exon	56318837	56318942	100	-	.	Parent=FBgn0039713.2.mrna1;Target=FBgn0039713.2 1 106 +
ChrX	stalkie_big_nohaplotig	CDS	56316945	56317045	.	-	2	Parent=FBgn0039713.2.mrna1;Target=FBgn0039713.2 626 726 +
ChrX	stalkie_big_nohaplotig	CDS	56317321	56317732	.	-	0	Parent=FBgn0039713.2.mrna1;Target=FBgn0039713.2 214 625 +
ChrX	stalkie_big_nohaplotig	CDS	56318356	56318462	.	-	2	Parent=FBgn0039713.2.mrna1;Target=FBgn0039713.2 107 213 +
ChrX	stalkie_big_nohaplotig	CDS	56318837	56318942	.	-	0	Parent=FBgn0039713.2.mrna1;Target=FBgn0039713.2 1 106 +
ChrX	gffcl	locus	56351004	56351553	.	+	.	ID=RLOC_00003245;geneIDs=comp138063_c0_seq1.path1;transcripts=comp138063_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56351004	56351553	.	+	.	ID=comp138063_c0_seq1.mrna1;geneID=comp138063_c0_seq1.path1;Name=comp138063_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=549;mismatches=1;indels=0;unknowns=0;Target=comp138063_c0_seq1 550 1 .;CDS_Target=comp138063_c0_seq1 95 3 .;locus=RLOC_00003245
ChrX	stalkie_big_nohaplotig	exon	56351004	56351553	99	+	.	Parent=comp138063_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	56351006	56351098	.	+	0	Parent=comp138063_c0_seq1.mrna1
ChrX	gffcl	locus	56352177	56352866	.	+	.	ID=RLOC_00003246;geneIDs=comp145029_c0_seq1.path1;transcripts=comp145029_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56352177	56352866	.	+	.	ID=comp145029_c0_seq1.mrna1;geneID=comp145029_c0_seq1.path1;Name=comp145029_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=688;mismatches=2;indels=0;unknowns=0;Target=comp145029_c0_seq1 690 1 .;CDS_Target=comp145029_c0_seq1 370 287 .;locus=RLOC_00003246
ChrX	stalkie_big_nohaplotig	exon	56352177	56352866	99	+	.	Parent=comp145029_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	56352463	56352546	.	+	0	Parent=comp145029_c0_seq1.mrna1
ChrX	gffcl	locus	56354439	56354998	.	-	.	ID=RLOC_00003247;geneIDs=comp155500_c0_seq1.path1;transcripts=comp155500_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56354439	56354998	.	-	.	ID=comp155500_c0_seq1.mrna1;geneID=comp155500_c0_seq1.path1;Name=comp155500_c0_seq1;Dir=sensecoverage=87.9;identity=96.9;matches=466;mismatches=15;indels=0;unknowns=0;locus=RLOC_00003247
ChrX	stalkie_big_nohaplotig	exon	56354439	56354824	99	-	.	Parent=comp155500_c0_seq1.mrna1;Target=comp155500_c0_seq1 162 547 +
ChrX	stalkie_big_nohaplotig	exon	56354904	56354998	86	-	.	Parent=comp155500_c0_seq1.mrna1;Target=comp155500_c0_seq1 67 161 +
ChrX	stalkie_big_nohaplotig	CDS	56354821	56354824	.	-	1	Parent=comp155500_c0_seq1.mrna1;Target=comp155500_c0_seq1 162 165 +
ChrX	stalkie_big_nohaplotig	CDS	56354904	56354998	.	-	0	Parent=comp155500_c0_seq1.mrna1;Target=comp155500_c0_seq1 67 161 +
ChrX	gffcl	locus	56357051	56358193	.	-	.	ID=RLOC_00003248;geneIDs=comp150663_c0_seq1.path1;transcripts=comp150663_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56357051	56358193	.	-	.	ID=comp150663_c0_seq1.mrna1;geneID=comp150663_c0_seq1.path1;Name=comp150663_c0_seq1;Dir=indeterminatecoverage=89.4;identity=99.4;matches=1136;mismatches=1;indels=6;unknowns=0;Target=comp150663_c0_seq1 1137 1 .;CDS_Target=comp150663_c0_seq1 538 413 .;locus=RLOC_00003248
ChrX	stalkie_big_nohaplotig	exon	56357051	56358193	99	-	.	Parent=comp150663_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	56357650	56357775	.	-	0	Parent=comp150663_c0_seq1.mrna1
ChrX	gffcl	locus	56360012	56361080	.	+	.	ID=RLOC_00003249;geneIDs=comp59506_c0_seq1.path1;transcripts=comp59506_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56360012	56361080	.	+	.	ID=comp59506_c0_seq1.mrna1;geneID=comp59506_c0_seq1.path1;Name=comp59506_c0_seq1;Dir=antisensecoverage=97.3;identity=100.0;matches=946;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003249
ChrX	stalkie_big_nohaplotig	exon	56360012	56360441	100	+	.	Parent=comp59506_c0_seq1.mrna1;Target=comp59506_c0_seq1 533 962 -
ChrX	stalkie_big_nohaplotig	exon	56360504	56360843	100	+	.	Parent=comp59506_c0_seq1.mrna1;Target=comp59506_c0_seq1 193 532 -
ChrX	stalkie_big_nohaplotig	exon	56360905	56361080	100	+	.	Parent=comp59506_c0_seq1.mrna1;Target=comp59506_c0_seq1 17 192 -
ChrX	stalkie_big_nohaplotig	CDS	56360303	56360441	.	+	0	Parent=comp59506_c0_seq1.mrna1;Target=comp59506_c0_seq1 533 671 .
ChrX	stalkie_big_nohaplotig	CDS	56360504	56360724	.	+	2	Parent=comp59506_c0_seq1.mrna1;Target=comp59506_c0_seq1 312 532 .
ChrX	gffcl	locus	56377808	56378509	.	+	.	ID=RLOC_00003250;geneIDs=FBgn0015222.3.path1;transcripts=FBgn0015222.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56377808	56378509	.	+	.	ID=FBgn0015222.3.mrna1;geneID=FBgn0015222.3.path1;Name=FBgn0015222.3;Dir=indeterminatecoverage=100.0;identity=99.9;matches=701;mismatches=1;indels=0;unknowns=0;Target=FBgn0015222.3 702 1 .;locus=RLOC_00003250
ChrX	stalkie_big_nohaplotig	exon	56377808	56378509	99	+	.	Parent=FBgn0015222.3.mrna1
ChrX	stalkie_big_nohaplotig	CDS	56377808	56378509	.	+	0	Parent=FBgn0015222.3.mrna1
ChrX	gffcl	locus	56380324	56381060	.	-	.	ID=RLOC_00003251;geneIDs=comp134855_c0_seq1.path1;transcripts=comp134855_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56380324	56381060	.	-	.	ID=comp134855_c0_seq1.mrna1;geneID=comp134855_c0_seq1.path1;Name=comp134855_c0_seq1;Dir=antisensecoverage=85.5;identity=92.2;matches=678;mismatches=3;indels=54;unknowns=0;locus=RLOC_00003251
ChrX	stalkie_big_nohaplotig	exon	56380324	56380893	91	-	.	Parent=comp134855_c0_seq1.mrna1;Target=comp134855_c0_seq1 43 666 -
ChrX	stalkie_big_nohaplotig	exon	56380950	56381060	99	-	.	Parent=comp134855_c0_seq1.mrna1;Target=comp134855_c0_seq1 667 777 -
ChrX	stalkie_big_nohaplotig	CDS	56380396	56380893	.	-	0	Parent=comp134855_c0_seq1.mrna1;Target=comp134855_c0_seq1 115 666 .
ChrX	stalkie_big_nohaplotig	CDS	56380950	56380952	.	-	0	Parent=comp134855_c0_seq1.mrna1;Target=comp134855_c0_seq1 667 669 .
ChrX	gffcl	locus	56402159	56403175	.	+	.	ID=RLOC_00003252;geneIDs=comp153429_c0_seq1.path1;transcripts=comp153429_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56402159	56403175	.	+	.	ID=comp153429_c0_seq1.mrna1;geneID=comp153429_c0_seq1.path1;Name=comp153429_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=960;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003252
ChrX	stalkie_big_nohaplotig	exon	56402159	56402748	99	+	.	Parent=comp153429_c0_seq1.mrna1;Target=comp153429_c0_seq1 1 590 +
ChrX	stalkie_big_nohaplotig	exon	56402804	56403175	99	+	.	Parent=comp153429_c0_seq1.mrna1;Target=comp153429_c0_seq1 591 962 +
ChrX	stalkie_big_nohaplotig	CDS	56402371	56402748	.	+	0	Parent=comp153429_c0_seq1.mrna1;Target=comp153429_c0_seq1 213 590 +
ChrX	stalkie_big_nohaplotig	CDS	56402804	56402980	.	+	0	Parent=comp153429_c0_seq1.mrna1;Target=comp153429_c0_seq1 591 767 +
ChrX	gffcl	locus	56419954	56427783	.	+	.	ID=RLOC_00003253;geneIDs=FBgn0026432.1.path1;transcripts=FBgn0026432.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56419954	56427783	.	+	.	ID=FBgn0026432.1.mrna1;geneID=FBgn0026432.1.path1;Name=FBgn0026432.1;Dir=sensecoverage=100.0;identity=99.4;matches=3723;mismatches=21;indels=0;unknowns=0;locus=RLOC_00003253
ChrX	stalkie_big_nohaplotig	exon	56419954	56420352	97	+	.	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 1 399 +
ChrX	stalkie_big_nohaplotig	exon	56420408	56420651	97	+	.	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 400 643 +
ChrX	stalkie_big_nohaplotig	exon	56420718	56420749	100	+	.	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 644 675 +
ChrX	stalkie_big_nohaplotig	exon	56420810	56421068	99	+	.	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 676 934 +
ChrX	stalkie_big_nohaplotig	exon	56421127	56421320	99	+	.	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 935 1128 +
ChrX	stalkie_big_nohaplotig	exon	56421419	56421572	100	+	.	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 1129 1282 +
ChrX	stalkie_big_nohaplotig	exon	56421640	56421763	99	+	.	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 1283 1406 +
ChrX	stalkie_big_nohaplotig	exon	56421851	56422067	99	+	.	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 1407 1623 +
ChrX	stalkie_big_nohaplotig	exon	56423653	56424037	99	+	.	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 1624 2008 +
ChrX	stalkie_big_nohaplotig	exon	56425927	56426931	99	+	.	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 2009 3013 +
ChrX	stalkie_big_nohaplotig	exon	56426990	56427527	100	+	.	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 3014 3551 +
ChrX	stalkie_big_nohaplotig	exon	56427591	56427783	100	+	.	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 3552 3744 +
ChrX	stalkie_big_nohaplotig	CDS	56419954	56420352	.	+	0	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 1 399 +
ChrX	stalkie_big_nohaplotig	CDS	56420408	56420651	.	+	0	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 400 643 +
ChrX	stalkie_big_nohaplotig	CDS	56420718	56420749	.	+	2	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 644 675 +
ChrX	stalkie_big_nohaplotig	CDS	56420810	56421068	.	+	0	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 676 934 +
ChrX	stalkie_big_nohaplotig	CDS	56421127	56421320	.	+	2	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 935 1128 +
ChrX	stalkie_big_nohaplotig	CDS	56421419	56421572	.	+	0	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 1129 1282 +
ChrX	stalkie_big_nohaplotig	CDS	56421640	56421763	.	+	2	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 1283 1406 +
ChrX	stalkie_big_nohaplotig	CDS	56421851	56422067	.	+	1	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 1407 1623 +
ChrX	stalkie_big_nohaplotig	CDS	56423653	56424037	.	+	0	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 1624 2008 +
ChrX	stalkie_big_nohaplotig	CDS	56425927	56426931	.	+	2	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 2009 3013 +
ChrX	stalkie_big_nohaplotig	CDS	56426990	56427527	.	+	2	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 3014 3551 +
ChrX	stalkie_big_nohaplotig	CDS	56427591	56427783	.	+	1	Parent=FBgn0026432.1.mrna1;Target=FBgn0026432.1 3552 3744 +
ChrX	gffcl	locus	56443539	56445145	.	+	.	ID=RLOC_00003255;geneIDs=comp157901_c0_seq1.path1;transcripts=comp157901_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56443539	56445145	.	+	.	ID=comp157901_c0_seq1.mrna1;geneID=comp157901_c0_seq1.path1;Name=comp157901_c0_seq1;Dir=antisensecoverage=50.7;identity=97.5;matches=1314;mismatches=33;indels=1;unknowns=0;locus=RLOC_00003255
ChrX	stalkie_big_nohaplotig	exon	56443539	56443942	99	+	.	Parent=comp157901_c0_seq1.mrna1;Target=comp157901_c0_seq1 965 1368 -
ChrX	stalkie_big_nohaplotig	exon	56443994	56444342	98	+	.	Parent=comp157901_c0_seq1.mrna1;Target=comp157901_c0_seq1 616 964 -
ChrX	stalkie_big_nohaplotig	exon	56444405	56444461	100	+	.	Parent=comp157901_c0_seq1.mrna1;Target=comp157901_c0_seq1 559 615 -
ChrX	stalkie_big_nohaplotig	exon	56444525	56444721	95	+	.	Parent=comp157901_c0_seq1.mrna1;Target=comp157901_c0_seq1 361 558 -
ChrX	stalkie_big_nohaplotig	exon	56444806	56445145	95	+	.	Parent=comp157901_c0_seq1.mrna1;Target=comp157901_c0_seq1 21 360 -
ChrX	stalkie_big_nohaplotig	CDS	56443813	56443942	.	+	0	Parent=comp157901_c0_seq1.mrna1;Target=comp157901_c0_seq1 965 1094 .
ChrX	stalkie_big_nohaplotig	CDS	56443994	56444205	.	+	2	Parent=comp157901_c0_seq1.mrna1;Target=comp157901_c0_seq1 753 964 .
ChrX	gffcl	locus	56500684	56511308	.	-	.	ID=RLOC_00003256;geneIDs=ORF1461.path1;transcripts=ORF1461.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56500684	56511308	.	-	.	ID=ORF1461.mrna1;geneID=ORF1461.path1;Name=ORF1461;Dir=sensecoverage=93.2;identity=98.7;matches=1010;mismatches=13;indels=0;unknowns=0;locus=RLOC_00003256
ChrX	stalkie_big_nohaplotig	exon	56500684	56500885	99	-	.	Parent=ORF1461.mrna1;Target=ORF1461 822 1023 +
ChrX	stalkie_big_nohaplotig	exon	56500942	56501074	97	-	.	Parent=ORF1461.mrna1;Target=ORF1461 689 821 +
ChrX	stalkie_big_nohaplotig	exon	56501997	56502514	98	-	.	Parent=ORF1461.mrna1;Target=ORF1461 171 688 +
ChrX	stalkie_big_nohaplotig	exon	56509354	56509475	100	-	.	Parent=ORF1461.mrna1;Target=ORF1461 49 170 +
ChrX	stalkie_big_nohaplotig	exon	56509573	56509603	100	-	.	Parent=ORF1461.mrna1;Target=ORF1461 18 48 +
ChrX	stalkie_big_nohaplotig	exon	56511292	56511308	100	-	.	Parent=ORF1461.mrna1;Target=ORF1461 1 17 +
ChrX	stalkie_big_nohaplotig	CDS	56500684	56500885	.	-	1	Parent=ORF1461.mrna1;Target=ORF1461 822 1023 +
ChrX	stalkie_big_nohaplotig	CDS	56500942	56501074	.	-	2	Parent=ORF1461.mrna1;Target=ORF1461 689 821 +
ChrX	stalkie_big_nohaplotig	CDS	56501997	56502514	.	-	1	Parent=ORF1461.mrna1;Target=ORF1461 171 688 +
ChrX	stalkie_big_nohaplotig	CDS	56509354	56509475	.	-	0	Parent=ORF1461.mrna1;Target=ORF1461 49 170 +
ChrX	stalkie_big_nohaplotig	CDS	56509573	56509603	.	-	1	Parent=ORF1461.mrna1;Target=ORF1461 18 48 +
ChrX	stalkie_big_nohaplotig	CDS	56511292	56511308	.	-	0	Parent=ORF1461.mrna1;Target=ORF1461 1 17 +
ChrX	gffcl	locus	56503342	56503416	.	-	.	ID=RLOC_00003257;geneIDs=ORF1461.path2;transcripts=ORF1461.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	56503342	56503416	.	-	.	ID=ORF1461.mrna2;geneID=ORF1461.path2;Name=ORF1461;Dir=indeterminatecoverage=6.8;identity=100.0;matches=75;mismatches=0;indels=0;unknowns=0;Target=ORF1461 1098 1024 .;locus=RLOC_00003257
ChrX	stalkie_big_nohaplotig	exon	56503342	56503416	100	-	.	Parent=ORF1461.mrna2
ChrX	stalkie_big_nohaplotig	CDS	56503342	56503416	.	-	0	Parent=ORF1461.mrna2
ChrX	gffcl	locus	56529430	56529929	.	+	.	ID=RLOC_00003258;geneIDs=comp155494_c0_seq1.path1;transcripts=comp155494_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56529430	56529929	.	+	.	ID=comp155494_c0_seq1.mrna1;geneID=comp155494_c0_seq1.path1;Name=comp155494_c0_seq1;Dir=indeterminatecoverage=97.8;identity=98.8;matches=494;mismatches=6;indels=0;unknowns=0;Target=comp155494_c0_seq1 500 1 .;CDS_Target=comp155494_c0_seq1 238 143 .;locus=RLOC_00003258
ChrX	stalkie_big_nohaplotig	exon	56529430	56529929	98	+	.	Parent=comp155494_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	56529572	56529667	.	+	0	Parent=comp155494_c0_seq1.mrna1
ChrX	gffcl	locus	56555191	56556191	.	+	.	ID=RLOC_00003259;geneIDs=comp119064_c0_seq1.path1;transcripts=comp119064_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56555191	56556191	.	+	.	ID=comp119064_c0_seq1.mrna1;geneID=comp119064_c0_seq1.path1;Name=comp119064_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1001;mismatches=0;indels=0;unknowns=0;Target=comp119064_c0_seq1 1001 1 .;CDS_Target=comp119064_c0_seq1 658 80 .;locus=RLOC_00003259
ChrX	stalkie_big_nohaplotig	exon	56555191	56556191	100	+	.	Parent=comp119064_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	56555270	56555848	.	+	0	Parent=comp119064_c0_seq1.mrna1
ChrX	gffcl	locus	56565960	56566211	.	+	.	ID=RLOC_00003260;geneIDs=comp153547_c0_seq1.path2;transcripts=comp153547_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	56565960	56566211	.	+	.	ID=comp153547_c0_seq1.mrna2;geneID=comp153547_c0_seq1.path2;Name=comp153547_c0_seq1;Dir=sensecoverage=12.6;identity=86.8;matches=210;mismatches=31;indels=1;unknowns=0;locus=RLOC_00003260
ChrX	stalkie_big_nohaplotig	exon	56565960	56566154	88	+	.	Parent=comp153547_c0_seq1.mrna2;Target=comp153547_c0_seq1 291 486 +
ChrX	stalkie_big_nohaplotig	exon	56566166	56566211	80	+	.	Parent=comp153547_c0_seq1.mrna2;Target=comp153547_c0_seq1 487 532 +
ChrX	stalkie_big_nohaplotig	CDS	56565962	56566154	.	+	0	Parent=comp153547_c0_seq1.mrna2;Target=comp153547_c0_seq1 293 486 +
ChrX	stalkie_big_nohaplotig	CDS	56566166	56566211	.	+	2	Parent=comp153547_c0_seq1.mrna2;Target=comp153547_c0_seq1 487 532 +
ChrX	gffcl	locus	56566241	58432884	.	+	.	ID=RLOC_00003261;geneIDs=comp153547_c0_seq1.path1;transcripts=comp153547_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56566241	58432884	.	+	.	ID=comp153547_c0_seq1.mrna1;geneID=comp153547_c0_seq1.path1;Name=comp153547_c0_seq1;Dir=indeterminatecoverage=47.1;identity=86.5;matches=334;mismatches=46;indels=6;unknowns=0;Target=comp153547_c0_seq1 862 758 .;locus=RLOC_00003261
ChrX	stalkie_big_nohaplotig	exon	56566241	56566348	83	+	.	Parent=comp153547_c0_seq1.mrna1;Target=comp153547_c0_seq1 678 571 .
ChrX	stalkie_big_nohaplotig	exon	56566488	56566703	84	+	.	Parent=comp153547_c0_seq1.mrna1;Target=comp153547_c0_seq1 940 731 .
ChrX	stalkie_big_nohaplotig	exon	58410233	58410239	100	+	.	Parent=comp153547_c0_seq1.mrna1;Target=comp153547_c0_seq1 1371 1365 .
ChrX	stalkie_big_nohaplotig	exon	58414217	58414222	100	+	.	Parent=comp153547_c0_seq1.mrna1;Target=comp153547_c0_seq1 1377 1372 .
ChrX	stalkie_big_nohaplotig	exon	58420360	58420369	100	+	.	Parent=comp153547_c0_seq1.mrna1;Target=comp153547_c0_seq1 1387 1378 .
ChrX	stalkie_big_nohaplotig	exon	58422857	58422861	100	+	.	Parent=comp153547_c0_seq1.mrna1;Target=comp153547_c0_seq1 1395 1391 .
ChrX	stalkie_big_nohaplotig	exon	58428438	58428445	100	+	.	Parent=comp153547_c0_seq1.mrna1;Target=comp153547_c0_seq1 1403 1396 .
ChrX	stalkie_big_nohaplotig	exon	58428466	58428472	100	+	.	Parent=comp153547_c0_seq1.mrna1;Target=comp153547_c0_seq1 1454 1448 .
ChrX	stalkie_big_nohaplotig	exon	58432866	58432884	100	+	.	Parent=comp153547_c0_seq1.mrna1;Target=comp153547_c0_seq1 1473 1455 .
ChrX	stalkie_big_nohaplotig	CDS	56566515	56566625	.	+	0	Parent=comp153547_c0_seq1.mrna1
ChrX	gffcl	locus	56581469	56582611	.	+	.	ID=RLOC_00003262;geneIDs=ORF1313.path1;transcripts=ORF1313.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56581469	56582611	.	+	.	ID=ORF1313.mrna1;geneID=ORF1313.path1;Name=ORF1313;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1134;mismatches=9;indels=0;unknowns=0;Target=ORF1313 1143 1 .;locus=RLOC_00003262
ChrX	stalkie_big_nohaplotig	exon	56581469	56582611	99	+	.	Parent=ORF1313.mrna1
ChrX	stalkie_big_nohaplotig	CDS	56581469	56582611	.	+	0	Parent=ORF1313.mrna1
ChrX	gffcl	locus	56594251	56595107	.	+	.	ID=RLOC_00003263;geneIDs=ORF2816.path1;transcripts=ORF2816.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56594251	56595107	.	+	.	ID=ORF2816.mrna1;geneID=ORF2816.path1;Name=ORF2816;Dir=sensecoverage=100.0;identity=99.0;matches=793;mismatches=8;indels=0;unknowns=0;locus=RLOC_00003263
ChrX	stalkie_big_nohaplotig	exon	56594251	56594841	100	+	.	Parent=ORF2816.mrna1;Target=ORF2816 1 591 +
ChrX	stalkie_big_nohaplotig	exon	56594898	56595107	96	+	.	Parent=ORF2816.mrna1;Target=ORF2816 592 801 +
ChrX	stalkie_big_nohaplotig	CDS	56594251	56594841	.	+	0	Parent=ORF2816.mrna1;Target=ORF2816 1 591 +
ChrX	stalkie_big_nohaplotig	CDS	56594898	56595107	.	+	0	Parent=ORF2816.mrna1;Target=ORF2816 592 801 +
ChrX	gffcl	locus	56604946	56641336	.	-	.	ID=RLOC_00003264;geneIDs=ORF1609.path1,comp161744_c0_seq1.path1;transcripts=ORF1609.mrna1,comp161744_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56604946	56641118	.	-	.	ID=ORF1609.mrna1;geneID=ORF1609.path1;Name=ORF1609;Dir=sensecoverage=100.0;identity=98.9;matches=1035;mismatches=12;indels=0;unknowns=0;locus=RLOC_00003264
ChrX	stalkie_big_nohaplotig	exon	56604946	56605044	94	-	.	Parent=ORF1609.mrna1;Target=ORF1609 949 1047 +
ChrX	stalkie_big_nohaplotig	exon	56605134	56605440	97	-	.	Parent=ORF1609.mrna1;Target=ORF1609 642 948 +
ChrX	stalkie_big_nohaplotig	exon	56605507	56605653	100	-	.	Parent=ORF1609.mrna1;Target=ORF1609 495 641 +
ChrX	stalkie_big_nohaplotig	exon	56605720	56605908	100	-	.	Parent=ORF1609.mrna1;Target=ORF1609 306 494 +
ChrX	stalkie_big_nohaplotig	exon	56605975	56606024	100	-	.	Parent=ORF1609.mrna1;Target=ORF1609 256 305 +
ChrX	stalkie_big_nohaplotig	exon	56639477	56639561	100	-	.	Parent=ORF1609.mrna1;Target=ORF1609 171 255 +
ChrX	stalkie_big_nohaplotig	exon	56639628	56639739	100	-	.	Parent=ORF1609.mrna1;Target=ORF1609 59 170 +
ChrX	stalkie_big_nohaplotig	exon	56641061	56641118	100	-	.	Parent=ORF1609.mrna1;Target=ORF1609 1 58 +
ChrX	stalkie_big_nohaplotig	CDS	56604946	56605044	.	-	0	Parent=ORF1609.mrna1;Target=ORF1609 949 1047 +
ChrX	stalkie_big_nohaplotig	CDS	56605134	56605440	.	-	1	Parent=ORF1609.mrna1;Target=ORF1609 642 948 +
ChrX	stalkie_big_nohaplotig	CDS	56605507	56605653	.	-	1	Parent=ORF1609.mrna1;Target=ORF1609 495 641 +
ChrX	stalkie_big_nohaplotig	CDS	56605720	56605908	.	-	1	Parent=ORF1609.mrna1;Target=ORF1609 306 494 +
ChrX	stalkie_big_nohaplotig	CDS	56605975	56606024	.	-	0	Parent=ORF1609.mrna1;Target=ORF1609 256 305 +
ChrX	stalkie_big_nohaplotig	CDS	56639477	56639561	.	-	1	Parent=ORF1609.mrna1;Target=ORF1609 171 255 +
ChrX	stalkie_big_nohaplotig	CDS	56639628	56639739	.	-	2	Parent=ORF1609.mrna1;Target=ORF1609 59 170 +
ChrX	stalkie_big_nohaplotig	CDS	56641061	56641118	.	-	0	Parent=ORF1609.mrna1;Target=ORF1609 1 58 +
ChrX	stalkie_big_nohaplotig	mRNA	56637944	56641336	.	-	.	ID=comp161744_c0_seq1.mrna1;geneID=comp161744_c0_seq1.path1;Name=comp161744_c0_seq1;Dir=antisensecoverage=99.7;identity=98.3;matches=1690;mismatches=25;indels=4;unknowns=0;locus=RLOC_00003264
ChrX	stalkie_big_nohaplotig	exon	56637944	56638496	99	-	.	Parent=comp161744_c0_seq1.mrna1;Target=comp161744_c0_seq1 6 558 -
ChrX	stalkie_big_nohaplotig	exon	56638586	56638892	99	-	.	Parent=comp161744_c0_seq1.mrna1;Target=comp161744_c0_seq1 559 865 -
ChrX	stalkie_big_nohaplotig	exon	56638959	56639105	97	-	.	Parent=comp161744_c0_seq1.mrna1;Target=comp161744_c0_seq1 866 1012 -
ChrX	stalkie_big_nohaplotig	exon	56639172	56639360	95	-	.	Parent=comp161744_c0_seq1.mrna1;Target=comp161744_c0_seq1 1013 1201 -
ChrX	stalkie_big_nohaplotig	exon	56639427	56639561	97	-	.	Parent=comp161744_c0_seq1.mrna1;Target=comp161744_c0_seq1 1202 1336 -
ChrX	stalkie_big_nohaplotig	exon	56639628	56639739	100	-	.	Parent=comp161744_c0_seq1.mrna1;Target=comp161744_c0_seq1 1337 1448 -
ChrX	stalkie_big_nohaplotig	exon	56641061	56641336	97	-	.	Parent=comp161744_c0_seq1.mrna1;Target=comp161744_c0_seq1 1449 1720 -
ChrX	stalkie_big_nohaplotig	CDS	56638395	56638496	.	-	0	Parent=comp161744_c0_seq1.mrna1;Target=comp161744_c0_seq1 457 558 .
ChrX	stalkie_big_nohaplotig	CDS	56638586	56638892	.	-	1	Parent=comp161744_c0_seq1.mrna1;Target=comp161744_c0_seq1 559 865 .
ChrX	stalkie_big_nohaplotig	CDS	56638959	56639105	.	-	1	Parent=comp161744_c0_seq1.mrna1;Target=comp161744_c0_seq1 866 1012 .
ChrX	stalkie_big_nohaplotig	CDS	56639172	56639360	.	-	1	Parent=comp161744_c0_seq1.mrna1;Target=comp161744_c0_seq1 1013 1201 .
ChrX	stalkie_big_nohaplotig	CDS	56639427	56639561	.	-	1	Parent=comp161744_c0_seq1.mrna1;Target=comp161744_c0_seq1 1202 1336 .
ChrX	stalkie_big_nohaplotig	CDS	56639628	56639739	.	-	2	Parent=comp161744_c0_seq1.mrna1;Target=comp161744_c0_seq1 1337 1448 .
ChrX	stalkie_big_nohaplotig	CDS	56641061	56641085	.	-	0	Parent=comp161744_c0_seq1.mrna1;Target=comp161744_c0_seq1 1449 1473 .
ChrX	gffcl	locus	56606967	56607559	.	+	.	ID=RLOC_00003265;geneIDs=comp172145_c0_seq1.path1;transcripts=comp172145_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56606967	56607559	.	+	.	ID=comp172145_c0_seq1.mrna1;geneID=comp172145_c0_seq1.path1;Name=comp172145_c0_seq1;Dir=antisensecoverage=98.7;identity=100.0;matches=524;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003265
ChrX	stalkie_big_nohaplotig	exon	56606967	56607062	100	+	.	Parent=comp172145_c0_seq1.mrna1;Target=comp172145_c0_seq1 436 531 -
ChrX	stalkie_big_nohaplotig	exon	56607132	56607559	100	+	.	Parent=comp172145_c0_seq1.mrna1;Target=comp172145_c0_seq1 8 435 -
ChrX	stalkie_big_nohaplotig	CDS	56607060	56607062	.	+	0	Parent=comp172145_c0_seq1.mrna1;Target=comp172145_c0_seq1 436 438 .
ChrX	stalkie_big_nohaplotig	CDS	56607132	56607437	.	+	0	Parent=comp172145_c0_seq1.mrna1;Target=comp172145_c0_seq1 130 435 .
ChrX	gffcl	locus	56663918	56664372	.	-	.	ID=RLOC_00003267;geneIDs=FBgn0011586.3.path1;transcripts=FBgn0011586.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56663918	56664372	.	-	.	ID=FBgn0011586.3.mrna1;geneID=FBgn0011586.3.path1;Name=FBgn0011586.3;Dir=indeterminatecoverage=99.1;identity=99.8;matches=454;mismatches=1;indels=0;unknowns=0;Target=FBgn0011586.3 459 5 .;CDS_Target=FBgn0011586.3 459 7 .;locus=RLOC_00003267
ChrX	stalkie_big_nohaplotig	exon	56663918	56664372	99	-	.	Parent=FBgn0011586.3.mrna1
ChrX	stalkie_big_nohaplotig	CDS	56663918	56664370	.	-	0	Parent=FBgn0011586.3.mrna1
ChrX	gffcl	locus	56686426	56687867	.	-	.	ID=RLOC_00003268;geneIDs=comp156375_c0_seq1.path2;transcripts=comp156375_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	56686426	56687867	.	-	.	ID=comp156375_c0_seq1.mrna2;geneID=comp156375_c0_seq1.path2;Name=comp156375_c0_seq1;Dir=sensecoverage=99.6;identity=98.5;matches=1127;mismatches=16;indels=1;unknowns=0;locus=RLOC_00003268
ChrX	stalkie_big_nohaplotig	exon	56686426	56686917	99	-	.	Parent=comp156375_c0_seq1.mrna2;Target=comp156375_c0_seq1 658 1149 +
ChrX	stalkie_big_nohaplotig	exon	56686987	56687137	100	-	.	Parent=comp156375_c0_seq1.mrna2;Target=comp156375_c0_seq1 507 657 +
ChrX	stalkie_big_nohaplotig	exon	56687261	56687487	98	-	.	Parent=comp156375_c0_seq1.mrna2;Target=comp156375_c0_seq1 279 506 +
ChrX	stalkie_big_nohaplotig	exon	56687595	56687867	96	-	.	Parent=comp156375_c0_seq1.mrna2;Target=comp156375_c0_seq1 6 278 +
ChrX	stalkie_big_nohaplotig	CDS	56686652	56686917	.	-	2	Parent=comp156375_c0_seq1.mrna2;Target=comp156375_c0_seq1 658 923 +
ChrX	stalkie_big_nohaplotig	CDS	56686987	56687137	.	-	0	Parent=comp156375_c0_seq1.mrna2;Target=comp156375_c0_seq1 507 657 +
ChrX	stalkie_big_nohaplotig	CDS	56687261	56687443	.	-	0	Parent=comp156375_c0_seq1.mrna2;Target=comp156375_c0_seq1 324 506 +
ChrX	gffcl	locus	56745980	56793627	.	+	.	ID=RLOC_00003269;geneIDs=ORF2985.path1;transcripts=ORF2985.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56745980	56793627	.	+	.	ID=ORF2985.mrna1;geneID=ORF2985.path1;Name=ORF2985;Dir=indeterminatecoverage=99.9;identity=99.0;matches=774;mismatches=8;indels=0;unknowns=0;locus=RLOC_00003269
ChrX	stalkie_big_nohaplotig	exon	56745980	56746389	99	+	.	Parent=ORF2985.mrna1;Target=ORF2985 411 2 .
ChrX	stalkie_big_nohaplotig	exon	56793256	56793627	98	+	.	Parent=ORF2985.mrna1;Target=ORF2985 783 412 .
ChrX	stalkie_big_nohaplotig	CDS	56745982	56746389	.	+	0	Parent=ORF2985.mrna1;Target=ORF2985 411 4 .
ChrX	stalkie_big_nohaplotig	CDS	56793256	56793627	.	+	0	Parent=ORF2985.mrna1;Target=ORF2985 783 412 .
ChrX	gffcl	locus	56758190	56758670	.	+	.	ID=RLOC_00003270;geneIDs=comp144854_c0_seq1.path1;transcripts=comp144854_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56758190	56758670	.	+	.	ID=comp144854_c0_seq1.mrna1;geneID=comp144854_c0_seq1.path1;Name=comp144854_c0_seq1;Dir=antisensecoverage=100.0;identity=94.4;matches=353;mismatches=5;indels=16;unknowns=0;locus=RLOC_00003270
ChrX	stalkie_big_nohaplotig	exon	56758190	56758262	95	+	.	Parent=comp144854_c0_seq1.mrna1;Target=comp144854_c0_seq1 302 374 -
ChrX	stalkie_big_nohaplotig	exon	56758386	56758670	94	+	.	Parent=comp144854_c0_seq1.mrna1;Target=comp144854_c0_seq1 1 301 -
ChrX	stalkie_big_nohaplotig	CDS	56758242	56758262	.	+	0	Parent=comp144854_c0_seq1.mrna1;Target=comp144854_c0_seq1 302 322 .
ChrX	stalkie_big_nohaplotig	CDS	56758386	56758556	.	+	0	Parent=comp144854_c0_seq1.mrna1;Target=comp144854_c0_seq1 131 301 .
ChrX	gffcl	locus	56764687	56765318	.	-	.	ID=RLOC_00003271;geneIDs=comp135983_c0_seq1.path1;transcripts=comp135983_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56764687	56765318	.	-	.	ID=comp135983_c0_seq1.mrna1;geneID=comp135983_c0_seq1.path1;Name=comp135983_c0_seq1;Dir=antisensecoverage=98.7;identity=98.7;matches=472;mismatches=0;indels=6;unknowns=0;locus=RLOC_00003271
ChrX	stalkie_big_nohaplotig	exon	56764687	56764866	96	-	.	Parent=comp135983_c0_seq1.mrna1;Target=comp135983_c0_seq1 7 180 -
ChrX	stalkie_big_nohaplotig	exon	56764968	56765087	100	-	.	Parent=comp135983_c0_seq1.mrna1;Target=comp135983_c0_seq1 181 300 -
ChrX	stalkie_big_nohaplotig	exon	56765141	56765318	100	-	.	Parent=comp135983_c0_seq1.mrna1;Target=comp135983_c0_seq1 301 478 -
ChrX	stalkie_big_nohaplotig	CDS	56764687	56764866	.	-	0	Parent=comp135983_c0_seq1.mrna1;Target=comp135983_c0_seq1 7 180 .
ChrX	stalkie_big_nohaplotig	CDS	56764968	56765087	.	-	0	Parent=comp135983_c0_seq1.mrna1;Target=comp135983_c0_seq1 181 300 .
ChrX	stalkie_big_nohaplotig	CDS	56765141	56765317	.	-	0	Parent=comp135983_c0_seq1.mrna1;Target=comp135983_c0_seq1 301 477 .
ChrX	gffcl	locus	56780873	56781410	.	+	.	ID=RLOC_00003272;geneIDs=comp134218_c0_seq1.path1;transcripts=comp134218_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56780873	56781410	.	+	.	ID=comp134218_c0_seq1.mrna1;geneID=comp134218_c0_seq1.path1;Name=comp134218_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.4;matches=535;mismatches=3;indels=0;unknowns=0;Target=comp134218_c0_seq1 539 2 .;CDS_Target=comp134218_c0_seq1 403 74 .;locus=RLOC_00003272
ChrX	stalkie_big_nohaplotig	exon	56780873	56781410	99	+	.	Parent=comp134218_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	56780945	56781274	.	+	0	Parent=comp134218_c0_seq1.mrna1
ChrX	gffcl	locus	56787230	56787767	.	+	.	ID=RLOC_00003273;geneIDs=comp134218_c0_seq1.path2;transcripts=comp134218_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	56787230	56787767	.	+	.	ID=comp134218_c0_seq1.mrna2;geneID=comp134218_c0_seq1.path2;Name=comp134218_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.4;matches=535;mismatches=3;indels=0;unknowns=0;Target=comp134218_c0_seq1 539 2 .;CDS_Target=comp134218_c0_seq1 403 74 .;locus=RLOC_00003273
ChrX	stalkie_big_nohaplotig	exon	56787230	56787767	99	+	.	Parent=comp134218_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	56787302	56787631	.	+	0	Parent=comp134218_c0_seq1.mrna2
ChrX	gffcl	locus	56798319	56799759	.	+	.	ID=RLOC_00003274;geneIDs=comp156375_c0_seq1.path1;transcripts=comp156375_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56798319	56799759	.	+	.	ID=comp156375_c0_seq1.mrna1;geneID=comp156375_c0_seq1.path1;Name=comp156375_c0_seq1;Dir=sensecoverage=99.6;identity=98.9;matches=1131;mismatches=11;indels=2;unknowns=0;locus=RLOC_00003274
ChrX	stalkie_big_nohaplotig	exon	56798319	56798591	98	+	.	Parent=comp156375_c0_seq1.mrna1;Target=comp156375_c0_seq1 6 278 +
ChrX	stalkie_big_nohaplotig	exon	56798699	56798926	100	+	.	Parent=comp156375_c0_seq1.mrna1;Target=comp156375_c0_seq1 279 506 +
ChrX	stalkie_big_nohaplotig	exon	56799050	56799200	100	+	.	Parent=comp156375_c0_seq1.mrna1;Target=comp156375_c0_seq1 507 657 +
ChrX	stalkie_big_nohaplotig	exon	56799270	56799759	98	+	.	Parent=comp156375_c0_seq1.mrna1;Target=comp156375_c0_seq1 658 1149 +
ChrX	stalkie_big_nohaplotig	CDS	56798744	56798926	.	+	0	Parent=comp156375_c0_seq1.mrna1;Target=comp156375_c0_seq1 324 506 +
ChrX	stalkie_big_nohaplotig	CDS	56799050	56799200	.	+	0	Parent=comp156375_c0_seq1.mrna1;Target=comp156375_c0_seq1 507 657 +
ChrX	stalkie_big_nohaplotig	CDS	56799270	56799535	.	+	2	Parent=comp156375_c0_seq1.mrna1;Target=comp156375_c0_seq1 658 923 +
ChrX	gffcl	locus	56807228	56808490	.	-	.	ID=RLOC_00003275;geneIDs=ORF1750.path1;transcripts=ORF1750.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56807228	56808490	.	-	.	ID=ORF1750.mrna1;geneID=ORF1750.path1;Name=ORF1750;Dir=sensecoverage=100.0;identity=98.9;matches=994;mismatches=11;indels=0;unknowns=0;locus=RLOC_00003275
ChrX	stalkie_big_nohaplotig	exon	56807228	56807296	100	-	.	Parent=ORF1750.mrna1;Target=ORF1750 937 1005 +
ChrX	stalkie_big_nohaplotig	exon	56807356	56807544	98	-	.	Parent=ORF1750.mrna1;Target=ORF1750 748 936 +
ChrX	stalkie_big_nohaplotig	exon	56807620	56807762	99	-	.	Parent=ORF1750.mrna1;Target=ORF1750 605 747 +
ChrX	stalkie_big_nohaplotig	exon	56807820	56807953	100	-	.	Parent=ORF1750.mrna1;Target=ORF1750 471 604 +
ChrX	stalkie_big_nohaplotig	exon	56808021	56808490	98	-	.	Parent=ORF1750.mrna1;Target=ORF1750 1 470 +
ChrX	stalkie_big_nohaplotig	CDS	56807228	56807296	.	-	0	Parent=ORF1750.mrna1;Target=ORF1750 937 1005 +
ChrX	stalkie_big_nohaplotig	CDS	56807356	56807544	.	-	0	Parent=ORF1750.mrna1;Target=ORF1750 748 936 +
ChrX	stalkie_big_nohaplotig	CDS	56807620	56807762	.	-	2	Parent=ORF1750.mrna1;Target=ORF1750 605 747 +
ChrX	stalkie_big_nohaplotig	CDS	56807820	56807953	.	-	1	Parent=ORF1750.mrna1;Target=ORF1750 471 604 +
ChrX	stalkie_big_nohaplotig	CDS	56808021	56808490	.	-	0	Parent=ORF1750.mrna1;Target=ORF1750 1 470 +
ChrX	gffcl	locus	56810569	56810818	.	+	.	ID=RLOC_00003276;geneIDs=comp148603_c0_seq1.path1;transcripts=comp148603_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56810569	56810818	.	+	.	ID=comp148603_c0_seq1.mrna1;geneID=comp148603_c0_seq1.path1;Name=comp148603_c0_seq1;Dir=sensecoverage=18.2;identity=98.0;matches=193;mismatches=4;indels=0;unknowns=0;locus=RLOC_00003276
ChrX	stalkie_big_nohaplotig	exon	56810569	56810731	97	+	.	Parent=comp148603_c0_seq1.mrna1;Target=comp148603_c0_seq1 1 163 +
ChrX	stalkie_big_nohaplotig	exon	56810785	56810818	100	+	.	Parent=comp148603_c0_seq1.mrna1;Target=comp148603_c0_seq1 164 197 +
ChrX	gffcl	locus	56833754	56834620	.	-	.	ID=RLOC_00003277;geneIDs=comp148603_c0_seq1.path2;transcripts=comp148603_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	56833754	56834620	.	-	.	ID=comp148603_c0_seq1.mrna2;geneID=comp148603_c0_seq1.path2;Name=comp148603_c0_seq1;Dir=indeterminatecoverage=80.3;identity=99.8;matches=865;mismatches=2;indels=0;unknowns=0;Target=comp148603_c0_seq1 1064 198 .;CDS_Target=comp148603_c0_seq1 747 205 .;locus=RLOC_00003277
ChrX	stalkie_big_nohaplotig	exon	56833754	56834620	99	-	.	Parent=comp148603_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	56834071	56834613	.	-	0	Parent=comp148603_c0_seq1.mrna2
ChrX	gffcl	locus	56838983	56839904	.	+	.	ID=RLOC_00003278;geneIDs=comp147404_c0_seq1.path1;transcripts=comp147404_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56838983	56839904	.	+	.	ID=comp147404_c0_seq1.mrna1;geneID=comp147404_c0_seq1.path1;Name=comp147404_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.3;matches=872;mismatches=41;indels=53;unknowns=0;Target=comp147404_c0_seq1 957 1 .;CDS_Target=comp147404_c0_seq1 508 419 .;locus=RLOC_00003278
ChrX	stalkie_big_nohaplotig	exon	56838983	56839904	90	+	.	Parent=comp147404_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	56839406	56839495	.	+	0	Parent=comp147404_c0_seq1.mrna1
ChrX	gffcl	locus	56849853	56859243	.	+	.	ID=RLOC_00003280;geneIDs=ORF965.path1;transcripts=ORF965.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56849853	56859243	.	+	.	ID=ORF965.mrna1;geneID=ORF965.path1;Name=ORF965;Dir=sensecoverage=100.0;identity=99.4;matches=1306;mismatches=8;indels=0;unknowns=0;locus=RLOC_00003280
ChrX	stalkie_big_nohaplotig	exon	56849853	56849901	100	+	.	Parent=ORF965.mrna1;Target=ORF965 1 49 +
ChrX	stalkie_big_nohaplotig	exon	56855518	56856195	99	+	.	Parent=ORF965.mrna1;Target=ORF965 50 727 +
ChrX	stalkie_big_nohaplotig	exon	56858407	56858661	99	+	.	Parent=ORF965.mrna1;Target=ORF965 728 982 +
ChrX	stalkie_big_nohaplotig	exon	56858729	56858830	100	+	.	Parent=ORF965.mrna1;Target=ORF965 983 1084 +
ChrX	stalkie_big_nohaplotig	exon	56858899	56858994	100	+	.	Parent=ORF965.mrna1;Target=ORF965 1085 1180 +
ChrX	stalkie_big_nohaplotig	exon	56859060	56859131	100	+	.	Parent=ORF965.mrna1;Target=ORF965 1181 1252 +
ChrX	stalkie_big_nohaplotig	exon	56859182	56859243	98	+	.	Parent=ORF965.mrna1;Target=ORF965 1253 1314 +
ChrX	stalkie_big_nohaplotig	CDS	56849853	56849901	.	+	0	Parent=ORF965.mrna1;Target=ORF965 1 49 +
ChrX	stalkie_big_nohaplotig	CDS	56855518	56856195	.	+	2	Parent=ORF965.mrna1;Target=ORF965 50 727 +
ChrX	stalkie_big_nohaplotig	CDS	56858407	56858661	.	+	2	Parent=ORF965.mrna1;Target=ORF965 728 982 +
ChrX	stalkie_big_nohaplotig	CDS	56858729	56858830	.	+	2	Parent=ORF965.mrna1;Target=ORF965 983 1084 +
ChrX	stalkie_big_nohaplotig	CDS	56858899	56858994	.	+	2	Parent=ORF965.mrna1;Target=ORF965 1085 1180 +
ChrX	stalkie_big_nohaplotig	CDS	56859060	56859131	.	+	2	Parent=ORF965.mrna1;Target=ORF965 1181 1252 +
ChrX	stalkie_big_nohaplotig	CDS	56859182	56859243	.	+	2	Parent=ORF965.mrna1;Target=ORF965 1253 1314 +
ChrX	gffcl	locus	56893392	56896623	.	-	.	ID=RLOC_00003281;geneIDs=ORF648.path1;transcripts=ORF648.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56893392	56896623	.	-	.	ID=ORF648.mrna1;geneID=ORF648.path1;Name=ORF648;Dir=sensecoverage=100.0;identity=99.8;matches=1563;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003281
ChrX	stalkie_big_nohaplotig	exon	56893392	56893714	100	-	.	Parent=ORF648.mrna1;Target=ORF648 1244 1566 +
ChrX	stalkie_big_nohaplotig	exon	56893776	56893859	100	-	.	Parent=ORF648.mrna1;Target=ORF648 1160 1243 +
ChrX	stalkie_big_nohaplotig	exon	56893919	56894071	100	-	.	Parent=ORF648.mrna1;Target=ORF648 1007 1159 +
ChrX	stalkie_big_nohaplotig	exon	56894574	56894666	98	-	.	Parent=ORF648.mrna1;Target=ORF648 914 1006 +
ChrX	stalkie_big_nohaplotig	exon	56894765	56894974	100	-	.	Parent=ORF648.mrna1;Target=ORF648 704 913 +
ChrX	stalkie_big_nohaplotig	exon	56895921	56896623	99	-	.	Parent=ORF648.mrna1;Target=ORF648 1 703 +
ChrX	stalkie_big_nohaplotig	CDS	56893392	56893714	.	-	2	Parent=ORF648.mrna1;Target=ORF648 1244 1566 +
ChrX	stalkie_big_nohaplotig	CDS	56893776	56893859	.	-	2	Parent=ORF648.mrna1;Target=ORF648 1160 1243 +
ChrX	stalkie_big_nohaplotig	CDS	56893919	56894071	.	-	2	Parent=ORF648.mrna1;Target=ORF648 1007 1159 +
ChrX	stalkie_big_nohaplotig	CDS	56894574	56894666	.	-	2	Parent=ORF648.mrna1;Target=ORF648 914 1006 +
ChrX	stalkie_big_nohaplotig	CDS	56894765	56894974	.	-	2	Parent=ORF648.mrna1;Target=ORF648 704 913 +
ChrX	stalkie_big_nohaplotig	CDS	56895921	56896623	.	-	0	Parent=ORF648.mrna1;Target=ORF648 1 703 +
ChrX	gffcl	locus	56900260	56901722	.	+	.	ID=RLOC_00003282;geneIDs=ORF2024.path1;transcripts=ORF2024.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56900260	56901722	.	+	.	ID=ORF2024.mrna1;geneID=ORF2024.path1;Name=ORF2024;Dir=sensecoverage=100.0;identity=98.3;matches=920;mismatches=16;indels=0;unknowns=0;locus=RLOC_00003282
ChrX	stalkie_big_nohaplotig	exon	56900260	56900506	99	+	.	Parent=ORF2024.mrna1;Target=ORF2024 1 247 +
ChrX	stalkie_big_nohaplotig	exon	56900982	56901141	98	+	.	Parent=ORF2024.mrna1;Target=ORF2024 248 407 +
ChrX	stalkie_big_nohaplotig	exon	56901194	56901722	97	+	.	Parent=ORF2024.mrna1;Target=ORF2024 408 936 +
ChrX	stalkie_big_nohaplotig	CDS	56900260	56900506	.	+	0	Parent=ORF2024.mrna1;Target=ORF2024 1 247 +
ChrX	stalkie_big_nohaplotig	CDS	56900982	56901141	.	+	2	Parent=ORF2024.mrna1;Target=ORF2024 248 407 +
ChrX	stalkie_big_nohaplotig	CDS	56901194	56901722	.	+	1	Parent=ORF2024.mrna1;Target=ORF2024 408 936 +
ChrX	gffcl	locus	56907794	56908463	.	-	.	ID=RLOC_00003283;geneIDs=comp152738_c0_seq1.path1;transcripts=comp152738_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56907794	56908463	.	-	.	ID=comp152738_c0_seq1.mrna1;geneID=comp152738_c0_seq1.path1;Name=comp152738_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.0;matches=663;mismatches=7;indels=0;unknowns=0;Target=comp152738_c0_seq1 670 1 .;CDS_Target=comp152738_c0_seq1 589 2 .;locus=RLOC_00003283
ChrX	stalkie_big_nohaplotig	exon	56907794	56908463	98	-	.	Parent=comp152738_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	56907875	56908462	.	-	0	Parent=comp152738_c0_seq1.mrna1
ChrX	gffcl	locus	56918495	57273928	.	+	.	ID=RLOC_00003284;geneIDs=ORF1791.path1,comp162731_c0_seq1.path1;transcripts=comp162731_c0_seq1.mrna1,ORF1791.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56918495	56920067	.	+	.	ID=comp162731_c0_seq1.mrna1;geneID=comp162731_c0_seq1.path1;Name=comp162731_c0_seq1;Dir=sensecoverage=98.7;identity=92.9;matches=1164;mismatches=56;indels=33;unknowns=0;locus=RLOC_00003284
ChrX	stalkie_big_nohaplotig	exon	56918495	56918712	96	+	.	Parent=comp162731_c0_seq1.mrna1;Target=comp162731_c0_seq1 1 218 +
ChrX	stalkie_big_nohaplotig	exon	56918884	56918988	95	+	.	Parent=comp162731_c0_seq1.mrna1;Target=comp162731_c0_seq1 219 323 +
ChrX	stalkie_big_nohaplotig	exon	56919050	56919142	95	+	.	Parent=comp162731_c0_seq1.mrna1;Target=comp162731_c0_seq1 324 416 +
ChrX	stalkie_big_nohaplotig	exon	56919208	56919486	94	+	.	Parent=comp162731_c0_seq1.mrna1;Target=comp162731_c0_seq1 417 695 +
ChrX	stalkie_big_nohaplotig	exon	56919543	56920067	89	+	.	Parent=comp162731_c0_seq1.mrna1;Target=comp162731_c0_seq1 696 1253 +
ChrX	stalkie_big_nohaplotig	CDS	56918496	56918712	.	+	0	Parent=comp162731_c0_seq1.mrna1;Target=comp162731_c0_seq1 2 218 +
ChrX	stalkie_big_nohaplotig	CDS	56918884	56918988	.	+	2	Parent=comp162731_c0_seq1.mrna1;Target=comp162731_c0_seq1 219 323 +
ChrX	stalkie_big_nohaplotig	CDS	56919050	56919142	.	+	2	Parent=comp162731_c0_seq1.mrna1;Target=comp162731_c0_seq1 324 416 +
ChrX	stalkie_big_nohaplotig	CDS	56919208	56919486	.	+	2	Parent=comp162731_c0_seq1.mrna1;Target=comp162731_c0_seq1 417 695 +
ChrX	stalkie_big_nohaplotig	CDS	56919543	56919847	.	+	2	Parent=comp162731_c0_seq1.mrna1;Target=comp162731_c0_seq1 696 1000 +
ChrX	stalkie_big_nohaplotig	mRNA	56918496	57273928	.	+	.	ID=ORF1791.mrna1;geneID=ORF1791.path1;Name=ORF1791;Dir=sensecoverage=100.0;identity=96.7;matches=963;mismatches=33;indels=0;unknowns=0;locus=RLOC_00003284
ChrX	stalkie_big_nohaplotig	exon	56918496	56918712	96	+	.	Parent=ORF1791.mrna1;Target=ORF1791 1 217 +
ChrX	stalkie_big_nohaplotig	exon	56918884	56918988	95	+	.	Parent=ORF1791.mrna1;Target=ORF1791 218 322 +
ChrX	stalkie_big_nohaplotig	exon	56919050	56919142	95	+	.	Parent=ORF1791.mrna1;Target=ORF1791 323 415 +
ChrX	stalkie_big_nohaplotig	exon	56919208	56919486	94	+	.	Parent=ORF1791.mrna1;Target=ORF1791 416 694 +
ChrX	stalkie_big_nohaplotig	exon	57273627	57273928	99	+	.	Parent=ORF1791.mrna1;Target=ORF1791 695 996 +
ChrX	stalkie_big_nohaplotig	CDS	56918496	56918712	.	+	0	Parent=ORF1791.mrna1;Target=ORF1791 1 217 +
ChrX	stalkie_big_nohaplotig	CDS	56918884	56918988	.	+	2	Parent=ORF1791.mrna1;Target=ORF1791 218 322 +
ChrX	stalkie_big_nohaplotig	CDS	56919050	56919142	.	+	2	Parent=ORF1791.mrna1;Target=ORF1791 323 415 +
ChrX	stalkie_big_nohaplotig	CDS	56919208	56919486	.	+	2	Parent=ORF1791.mrna1;Target=ORF1791 416 694 +
ChrX	stalkie_big_nohaplotig	CDS	57273627	57273928	.	+	2	Parent=ORF1791.mrna1;Target=ORF1791 695 996 +
ChrX	gffcl	locus	56960440	56961919	.	+	.	ID=RLOC_00003285;geneIDs=ORF958.path1;transcripts=ORF958.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	56960440	56961919	.	+	.	ID=ORF958.mrna1;geneID=ORF958.path1;Name=ORF958;Dir=sensecoverage=100.0;identity=99.0;matches=1310;mismatches=13;indels=0;unknowns=0;locus=RLOC_00003285
ChrX	stalkie_big_nohaplotig	exon	56960440	56960457	100	+	.	Parent=ORF958.mrna1;Target=ORF958 1 18 +
ChrX	stalkie_big_nohaplotig	exon	56960541	56961716	98	+	.	Parent=ORF958.mrna1;Target=ORF958 19 1194 +
ChrX	stalkie_big_nohaplotig	exon	56961791	56961919	100	+	.	Parent=ORF958.mrna1;Target=ORF958 1195 1323 +
ChrX	stalkie_big_nohaplotig	CDS	56960440	56960457	.	+	0	Parent=ORF958.mrna1;Target=ORF958 1 18 +
ChrX	stalkie_big_nohaplotig	CDS	56960541	56961716	.	+	0	Parent=ORF958.mrna1;Target=ORF958 19 1194 +
ChrX	stalkie_big_nohaplotig	CDS	56961791	56961919	.	+	0	Parent=ORF958.mrna1;Target=ORF958 1195 1323 +
ChrX	gffcl	locus	57025528	57026298	.	-	.	ID=RLOC_00003287;geneIDs=FBgn0015222.2.path1;transcripts=FBgn0015222.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57025528	57026298	.	-	.	ID=FBgn0015222.2.mrna1;geneID=FBgn0015222.2.path1;Name=FBgn0015222.2;Dir=indeterminatecoverage=100.0;identity=99.9;matches=770;mismatches=1;indels=0;unknowns=0;Target=FBgn0015222.2 771 1 .;locus=RLOC_00003287
ChrX	stalkie_big_nohaplotig	exon	57025528	57026298	99	-	.	Parent=FBgn0015222.2.mrna1
ChrX	stalkie_big_nohaplotig	CDS	57025528	57026298	.	-	0	Parent=FBgn0015222.2.mrna1
ChrX	gffcl	locus	57066126	57067336	.	-	.	ID=RLOC_00003288;geneIDs=comp157922_c0_seq1.path1,comp280326_c0_seq1.path1;transcripts=comp157922_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57066126	57067336	.	-	.	ID=comp157922_c0_seq1.mrna1;geneID=comp157922_c0_seq1.path1;Name=comp157922_c0_seq1;Dir=antisensecoverage=99.8;identity=95.1;matches=990;mismatches=36;indels=15;unknowns=0;locus=RLOC_00003288
ChrX	stalkie_big_nohaplotig	exon	57066126	57066615	92	-	.	Parent=comp157922_c0_seq1.mrna1;Target=comp157922_c0_seq1 2 493 -
ChrX	stalkie_big_nohaplotig	exon	57066675	57066950	96	-	.	Parent=comp157922_c0_seq1.mrna1;Target=comp157922_c0_seq1 494 769 -
ChrX	stalkie_big_nohaplotig	exon	57067016	57067111	98	-	.	Parent=comp157922_c0_seq1.mrna1;Target=comp157922_c0_seq1 770 866 -
ChrX	stalkie_big_nohaplotig	exon	57067167	57067336	99	-	.	Parent=comp157922_c0_seq1.mrna1;Target=comp157922_c0_seq1 867 1036 -
ChrX	stalkie_big_nohaplotig	CDS	57066881	57066950	.	-	2	Parent=comp157922_c0_seq1.mrna1;Target=comp157922_c0_seq1 700 769 .
ChrX	stalkie_big_nohaplotig	CDS	57067016	57067111	.	-	2	Parent=comp157922_c0_seq1.mrna1;Target=comp157922_c0_seq1 770 866 .
ChrX	stalkie_big_nohaplotig	CDS	57067167	57067335	.	-	0	Parent=comp157922_c0_seq1.mrna1;Target=comp157922_c0_seq1 867 1035 .
ChrX	gffcl	locus	57131469	57132157	.	+	.	ID=RLOC_00003289;geneIDs=comp150380_c0_seq1.path1;transcripts=comp150380_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57131469	57132157	.	+	.	ID=comp150380_c0_seq1.mrna1;geneID=comp150380_c0_seq1.path1;Name=comp150380_c0_seq1;Dir=sensecoverage=98.5;identity=97.1;matches=507;mismatches=15;indels=0;unknowns=0;locus=RLOC_00003289
ChrX	stalkie_big_nohaplotig	exon	57131469	57131529	100	+	.	Parent=comp150380_c0_seq1.mrna1;Target=comp150380_c0_seq1 7 67 +
ChrX	stalkie_big_nohaplotig	exon	57131643	57131768	100	+	.	Parent=comp150380_c0_seq1.mrna1;Target=comp150380_c0_seq1 68 193 +
ChrX	stalkie_big_nohaplotig	exon	57131823	57132157	95	+	.	Parent=comp150380_c0_seq1.mrna1;Target=comp150380_c0_seq1 194 528 +
ChrX	stalkie_big_nohaplotig	CDS	57131648	57131768	.	+	0	Parent=comp150380_c0_seq1.mrna1;Target=comp150380_c0_seq1 73 193 +
ChrX	stalkie_big_nohaplotig	CDS	57131823	57132055	.	+	2	Parent=comp150380_c0_seq1.mrna1;Target=comp150380_c0_seq1 194 426 +
ChrX	gffcl	locus	57136623	57137336	.	-	.	ID=RLOC_00003290;geneIDs=comp62524_c0_seq1.path1;transcripts=comp62524_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57136623	57137336	.	-	.	ID=comp62524_c0_seq1.mrna1;geneID=comp62524_c0_seq1.path1;Name=comp62524_c0_seq1;Dir=antisensecoverage=97.6;identity=100.0;matches=661;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003290
ChrX	stalkie_big_nohaplotig	exon	57136623	57137198	100	-	.	Parent=comp62524_c0_seq1.mrna1;Target=comp62524_c0_seq1 16 591 -
ChrX	stalkie_big_nohaplotig	exon	57137252	57137336	100	-	.	Parent=comp62524_c0_seq1.mrna1;Target=comp62524_c0_seq1 592 676 -
ChrX	stalkie_big_nohaplotig	CDS	57136752	57137198	.	-	0	Parent=comp62524_c0_seq1.mrna1;Target=comp62524_c0_seq1 145 591 .
ChrX	stalkie_big_nohaplotig	CDS	57137252	57137335	.	-	0	Parent=comp62524_c0_seq1.mrna1;Target=comp62524_c0_seq1 592 675 .
ChrX	gffcl	locus	57137495	57138035	.	-	.	ID=RLOC_00003291;geneIDs=comp67652_c0_seq1.path1;transcripts=comp67652_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57137495	57138035	.	-	.	ID=comp67652_c0_seq1.mrna1;geneID=comp67652_c0_seq1.path1;Name=comp67652_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=536;mismatches=5;indels=0;unknowns=0;Target=comp67652_c0_seq1 541 1 .;CDS_Target=comp67652_c0_seq1 387 274 .;locus=RLOC_00003291
ChrX	stalkie_big_nohaplotig	exon	57137495	57138035	99	-	.	Parent=comp67652_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	57137649	57137762	.	-	0	Parent=comp67652_c0_seq1.mrna1
ChrX	gffcl	locus	57176897	57178137	.	+	.	ID=RLOC_00003292;geneIDs=comp151199_c0_seq1.path1;transcripts=comp151199_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57176897	57178137	.	+	.	ID=comp151199_c0_seq1.mrna1;geneID=comp151199_c0_seq1.path1;Name=comp151199_c0_seq1;Dir=antisensecoverage=99.7;identity=99.8;matches=946;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003292
ChrX	stalkie_big_nohaplotig	exon	57176897	57176987	100	+	.	Parent=comp151199_c0_seq1.mrna1;Target=comp151199_c0_seq1 860 950 -
ChrX	stalkie_big_nohaplotig	exon	57177090	57177257	100	+	.	Parent=comp151199_c0_seq1.mrna1;Target=comp151199_c0_seq1 692 859 -
ChrX	stalkie_big_nohaplotig	exon	57177330	57177518	99	+	.	Parent=comp151199_c0_seq1.mrna1;Target=comp151199_c0_seq1 503 691 -
ChrX	stalkie_big_nohaplotig	exon	57177577	57177774	99	+	.	Parent=comp151199_c0_seq1.mrna1;Target=comp151199_c0_seq1 305 502 -
ChrX	stalkie_big_nohaplotig	exon	57177836	57178137	100	+	.	Parent=comp151199_c0_seq1.mrna1;Target=comp151199_c0_seq1 3 304 -
ChrX	stalkie_big_nohaplotig	CDS	57176934	57176987	.	+	0	Parent=comp151199_c0_seq1.mrna1;Target=comp151199_c0_seq1 860 913 .
ChrX	stalkie_big_nohaplotig	CDS	57177090	57177257	.	+	0	Parent=comp151199_c0_seq1.mrna1;Target=comp151199_c0_seq1 692 859 .
ChrX	stalkie_big_nohaplotig	CDS	57177330	57177518	.	+	0	Parent=comp151199_c0_seq1.mrna1;Target=comp151199_c0_seq1 503 691 .
ChrX	stalkie_big_nohaplotig	CDS	57177577	57177774	.	+	0	Parent=comp151199_c0_seq1.mrna1;Target=comp151199_c0_seq1 305 502 .
ChrX	stalkie_big_nohaplotig	CDS	57177836	57177883	.	+	0	Parent=comp151199_c0_seq1.mrna1;Target=comp151199_c0_seq1 257 304 .
ChrX	gffcl	locus	57180949	57181877	.	-	.	ID=RLOC_00003293;geneIDs=comp148933_c0_seq1.path1;transcripts=comp148933_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57180949	57181877	.	-	.	ID=comp148933_c0_seq1.mrna1;geneID=comp148933_c0_seq1.path1;Name=comp148933_c0_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=749;mismatches=7;indels=0;unknowns=0;locus=RLOC_00003293
ChrX	stalkie_big_nohaplotig	exon	57180949	57181400	99	-	.	Parent=comp148933_c0_seq1.mrna1;Target=comp148933_c0_seq1 1 452 -
ChrX	stalkie_big_nohaplotig	exon	57181505	57181621	98	-	.	Parent=comp148933_c0_seq1.mrna1;Target=comp148933_c0_seq1 453 569 -
ChrX	stalkie_big_nohaplotig	exon	57181691	57181877	99	-	.	Parent=comp148933_c0_seq1.mrna1;Target=comp148933_c0_seq1 570 756 -
ChrX	stalkie_big_nohaplotig	CDS	57181086	57181400	.	-	0	Parent=comp148933_c0_seq1.mrna1;Target=comp148933_c0_seq1 138 452 .
ChrX	stalkie_big_nohaplotig	CDS	57181505	57181621	.	-	0	Parent=comp148933_c0_seq1.mrna1;Target=comp148933_c0_seq1 453 569 .
ChrX	stalkie_big_nohaplotig	CDS	57181691	57181804	.	-	0	Parent=comp148933_c0_seq1.mrna1;Target=comp148933_c0_seq1 570 683 .
ChrX	gffcl	locus	57353971	57359529	.	-	.	ID=RLOC_00003295;geneIDs=comp149987_c0_seq1.path1;transcripts=comp149987_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57353971	57359529	.	-	.	ID=comp149987_c0_seq1.mrna1;geneID=comp149987_c0_seq1.path1;Name=comp149987_c0_seq1;Dir=sensecoverage=99.9;identity=98.8;matches=908;mismatches=11;indels=0;unknowns=0;locus=RLOC_00003295
ChrX	stalkie_big_nohaplotig	exon	57353971	57354095	96	-	.	Parent=comp149987_c0_seq1.mrna1;Target=comp149987_c0_seq1 796 920 +
ChrX	stalkie_big_nohaplotig	exon	57355405	57355582	100	-	.	Parent=comp149987_c0_seq1.mrna1;Target=comp149987_c0_seq1 618 795 +
ChrX	stalkie_big_nohaplotig	exon	57355647	57355701	100	-	.	Parent=comp149987_c0_seq1.mrna1;Target=comp149987_c0_seq1 563 617 +
ChrX	stalkie_big_nohaplotig	exon	57355767	57356106	100	-	.	Parent=comp149987_c0_seq1.mrna1;Target=comp149987_c0_seq1 223 562 +
ChrX	stalkie_big_nohaplotig	exon	57359309	57359529	96	-	.	Parent=comp149987_c0_seq1.mrna1;Target=comp149987_c0_seq1 2 222 +
ChrX	stalkie_big_nohaplotig	CDS	57355653	57355701	.	-	1	Parent=comp149987_c0_seq1.mrna1;Target=comp149987_c0_seq1 563 611 +
ChrX	stalkie_big_nohaplotig	CDS	57355767	57356106	.	-	2	Parent=comp149987_c0_seq1.mrna1;Target=comp149987_c0_seq1 223 562 +
ChrX	stalkie_big_nohaplotig	CDS	57359309	57359327	.	-	0	Parent=comp149987_c0_seq1.mrna1;Target=comp149987_c0_seq1 204 222 +
ChrX	gffcl	locus	57368619	57369478	.	+	.	ID=RLOC_00003296;geneIDs=comp149630_c1_seq1.path1;transcripts=comp149630_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57368619	57369478	.	+	.	ID=comp149630_c1_seq1.mrna1;geneID=comp149630_c1_seq1.path1;Name=comp149630_c1_seq1;Dir=indeterminatecoverage=98.3;identity=97.8;matches=841;mismatches=18;indels=1;unknowns=0;Target=comp149630_c1_seq1 874 16 .;CDS_Target=comp149630_c1_seq1 384 307 .;locus=RLOC_00003296
ChrX	stalkie_big_nohaplotig	exon	57368619	57369478	97	+	.	Parent=comp149630_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	57368910	57368987	.	+	0	Parent=comp149630_c1_seq1.mrna1
ChrX	gffcl	locus	57369742	57372034	.	+	.	ID=RLOC_00003297;geneIDs=ORF966.path1;transcripts=ORF966.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57369742	57372034	.	+	.	ID=ORF966.mrna1;geneID=ORF966.path1;Name=ORF966;Dir=sensecoverage=100.0;identity=99.8;matches=1308;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003297
ChrX	stalkie_big_nohaplotig	exon	57369742	57369812	100	+	.	Parent=ORF966.mrna1;Target=ORF966 1 71 +
ChrX	stalkie_big_nohaplotig	exon	57370621	57371144	99	+	.	Parent=ORF966.mrna1;Target=ORF966 72 595 +
ChrX	stalkie_big_nohaplotig	exon	57371202	57371638	99	+	.	Parent=ORF966.mrna1;Target=ORF966 596 1032 +
ChrX	stalkie_big_nohaplotig	exon	57371704	57371866	100	+	.	Parent=ORF966.mrna1;Target=ORF966 1033 1195 +
ChrX	stalkie_big_nohaplotig	exon	57371919	57372034	99	+	.	Parent=ORF966.mrna1;Target=ORF966 1196 1311 +
ChrX	stalkie_big_nohaplotig	CDS	57369742	57369812	.	+	0	Parent=ORF966.mrna1;Target=ORF966 1 71 +
ChrX	stalkie_big_nohaplotig	CDS	57370621	57371144	.	+	1	Parent=ORF966.mrna1;Target=ORF966 72 595 +
ChrX	stalkie_big_nohaplotig	CDS	57371202	57371638	.	+	2	Parent=ORF966.mrna1;Target=ORF966 596 1032 +
ChrX	stalkie_big_nohaplotig	CDS	57371704	57371866	.	+	0	Parent=ORF966.mrna1;Target=ORF966 1033 1195 +
ChrX	stalkie_big_nohaplotig	CDS	57371919	57372034	.	+	2	Parent=ORF966.mrna1;Target=ORF966 1196 1311 +
ChrX	gffcl	locus	57389690	57391112	.	+	.	ID=RLOC_00003298;geneIDs=ORF2572.path1;transcripts=ORF2572.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57389690	57391112	.	+	.	ID=ORF2572.mrna1;geneID=ORF2572.path1;Name=ORF2572;Dir=sensecoverage=100.0;identity=97.7;matches=821;mismatches=19;indels=0;unknowns=0;locus=RLOC_00003298
ChrX	stalkie_big_nohaplotig	exon	57389690	57389777	100	+	.	Parent=ORF2572.mrna1;Target=ORF2572 1 88 +
ChrX	stalkie_big_nohaplotig	exon	57390185	57390432	95	+	.	Parent=ORF2572.mrna1;Target=ORF2572 89 336 +
ChrX	stalkie_big_nohaplotig	exon	57390552	57390702	96	+	.	Parent=ORF2572.mrna1;Target=ORF2572 337 487 +
ChrX	stalkie_big_nohaplotig	exon	57390760	57391112	99	+	.	Parent=ORF2572.mrna1;Target=ORF2572 488 840 +
ChrX	stalkie_big_nohaplotig	CDS	57390199	57390432	.	+	0	Parent=ORF2572.mrna1;Target=ORF2572 103 336 +
ChrX	stalkie_big_nohaplotig	CDS	57390552	57390702	.	+	0	Parent=ORF2572.mrna1;Target=ORF2572 337 487 +
ChrX	stalkie_big_nohaplotig	CDS	57390760	57391112	.	+	2	Parent=ORF2572.mrna1;Target=ORF2572 488 840 +
ChrX	gffcl	locus	57392800	57394959	.	+	.	ID=RLOC_00003299;geneIDs=comp146663_c0_seq1.path1;transcripts=comp146663_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57392800	57394959	.	+	.	ID=comp146663_c0_seq1.mrna1;geneID=comp146663_c0_seq1.path1;Name=comp146663_c0_seq1;Dir=sensecoverage=97.4;identity=99.4;matches=720;mismatches=4;indels=0;unknowns=0;locus=RLOC_00003299
ChrX	stalkie_big_nohaplotig	exon	57392800	57392883	98	+	.	Parent=comp146663_c0_seq1.mrna1;Target=comp146663_c0_seq1 2 85 +
ChrX	stalkie_big_nohaplotig	exon	57394141	57394308	100	+	.	Parent=comp146663_c0_seq1.mrna1;Target=comp146663_c0_seq1 86 253 +
ChrX	stalkie_big_nohaplotig	exon	57394369	57394557	100	+	.	Parent=comp146663_c0_seq1.mrna1;Target=comp146663_c0_seq1 254 442 +
ChrX	stalkie_big_nohaplotig	exon	57394619	57394819	99	+	.	Parent=comp146663_c0_seq1.mrna1;Target=comp146663_c0_seq1 443 643 +
ChrX	stalkie_big_nohaplotig	exon	57394878	57394959	97	+	.	Parent=comp146663_c0_seq1.mrna1;Target=comp146663_c0_seq1 644 725 +
ChrX	stalkie_big_nohaplotig	CDS	57392800	57392883	.	+	0	Parent=comp146663_c0_seq1.mrna1;Target=comp146663_c0_seq1 2 85 +
ChrX	stalkie_big_nohaplotig	CDS	57394141	57394308	.	+	0	Parent=comp146663_c0_seq1.mrna1;Target=comp146663_c0_seq1 86 253 +
ChrX	stalkie_big_nohaplotig	CDS	57394369	57394557	.	+	0	Parent=comp146663_c0_seq1.mrna1;Target=comp146663_c0_seq1 254 442 +
ChrX	stalkie_big_nohaplotig	CDS	57394619	57394819	.	+	0	Parent=comp146663_c0_seq1.mrna1;Target=comp146663_c0_seq1 443 643 +
ChrX	stalkie_big_nohaplotig	CDS	57394878	57394919	.	+	0	Parent=comp146663_c0_seq1.mrna1;Target=comp146663_c0_seq1 644 685 +
ChrX	gffcl	locus	57414821	57418116	.	-	.	ID=RLOC_00003300;geneIDs=comp118947_c1_seq1.path1;transcripts=comp118947_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57414821	57418116	.	-	.	ID=comp118947_c1_seq1.mrna1;geneID=comp118947_c1_seq1.path1;Name=comp118947_c1_seq1;Dir=sensecoverage=79.9;identity=93.9;matches=519;mismatches=34;indels=0;unknowns=0;locus=RLOC_00003300
ChrX	stalkie_big_nohaplotig	exon	57414821	57414825	100	-	.	Parent=comp118947_c1_seq1.mrna1;Target=comp118947_c1_seq1 549 553 +
ChrX	stalkie_big_nohaplotig	exon	57417407	57417712	93	-	.	Parent=comp118947_c1_seq1.mrna1;Target=comp118947_c1_seq1 243 548 +
ChrX	stalkie_big_nohaplotig	exon	57417796	57418020	93	-	.	Parent=comp118947_c1_seq1.mrna1;Target=comp118947_c1_seq1 18 242 +
ChrX	stalkie_big_nohaplotig	exon	57418100	57418116	94	-	.	Parent=comp118947_c1_seq1.mrna1;Target=comp118947_c1_seq1 1 17 +
ChrX	stalkie_big_nohaplotig	CDS	57417710	57417712	.	-	0	Parent=comp118947_c1_seq1.mrna1;Target=comp118947_c1_seq1 243 245 +
ChrX	stalkie_big_nohaplotig	CDS	57417796	57418020	.	-	0	Parent=comp118947_c1_seq1.mrna1;Target=comp118947_c1_seq1 18 242 +
ChrX	stalkie_big_nohaplotig	CDS	57418100	57418114	.	-	0	Parent=comp118947_c1_seq1.mrna1;Target=comp118947_c1_seq1 3 17 +
ChrX	gffcl	locus	57415029	58007685	.	-	.	ID=RLOC_00003301;geneIDs=comp162094_c2_seq1.path2;transcripts=comp162094_c2_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	57415029	58007685	.	-	.	ID=comp162094_c2_seq1.mrna2;geneID=comp162094_c2_seq1.path2;Name=comp162094_c2_seq1;Dir=antisensecoverage=64.4;identity=95.5;matches=514;mismatches=7;indels=17;unknowns=0;Target=comp162094_c2_seq1 372 455 .;locus=RLOC_00003301
ChrX	stalkie_big_nohaplotig	exon	57415029	57415030	100	-	.	Parent=comp162094_c2_seq1.mrna2;Target=comp162094_c2_seq1 274 275 -
ChrX	stalkie_big_nohaplotig	exon	57420775	57420776	100	-	.	Parent=comp162094_c2_seq1.mrna2;Target=comp162094_c2_seq1 276 277 -
ChrX	stalkie_big_nohaplotig	exon	57424669	57424672	100	-	.	Parent=comp162094_c2_seq1.mrna2;Target=comp162094_c2_seq1 278 281 -
ChrX	stalkie_big_nohaplotig	exon	57440541	57440543	100	-	.	Parent=comp162094_c2_seq1.mrna2;Target=comp162094_c2_seq1 282 284 -
ChrX	stalkie_big_nohaplotig	exon	57448149	57448153	100	-	.	Parent=comp162094_c2_seq1.mrna2;Target=comp162094_c2_seq1 285 289 -
ChrX	stalkie_big_nohaplotig	exon	57456165	57456185	71	-	.	Parent=comp162094_c2_seq1.mrna2;Target=comp162094_c2_seq1 290 306 -
ChrX	stalkie_big_nohaplotig	exon	57458611	57458616	100	-	.	Parent=comp162094_c2_seq1.mrna2;Target=comp162094_c2_seq1 307 312 -
ChrX	stalkie_big_nohaplotig	exon	57962102	57962108	100	-	.	Parent=comp162094_c2_seq1.mrna2;Target=comp162094_c2_seq1 313 319 -
ChrX	stalkie_big_nohaplotig	exon	57965937	57965938	100	-	.	Parent=comp162094_c2_seq1.mrna2;Target=comp162094_c2_seq1 320 321 -
ChrX	stalkie_big_nohaplotig	exon	57973014	57973017	100	-	.	Parent=comp162094_c2_seq1.mrna2;Target=comp162094_c2_seq1 322 325 -
ChrX	stalkie_big_nohaplotig	exon	57978655	57978661	100	-	.	Parent=comp162094_c2_seq1.mrna2;Target=comp162094_c2_seq1 326 332 -
ChrX	stalkie_big_nohaplotig	exon	57994939	57994948	30	-	.	Parent=comp162094_c2_seq1.mrna2;Target=comp162094_c2_seq1 333 335 -
ChrX	stalkie_big_nohaplotig	exon	57998159	57998160	100	-	.	Parent=comp162094_c2_seq1.mrna2;Target=comp162094_c2_seq1 336 337 -
ChrX	stalkie_big_nohaplotig	exon	58005376	58005384	100	-	.	Parent=comp162094_c2_seq1.mrna2;Target=comp162094_c2_seq1 338 346 -
ChrX	stalkie_big_nohaplotig	exon	58007234	58007685	97	-	.	Parent=comp162094_c2_seq1.mrna2;Target=comp162094_c2_seq1 347 796 -
ChrX	stalkie_big_nohaplotig	CDS	58007263	58007346	.	-	2	Parent=comp162094_c2_seq1.mrna2
ChrX	gffcl	locus	57450723	57452096	.	-	.	ID=RLOC_00003302;geneIDs=FBgn0051694.2.path2;transcripts=FBgn0051694.2.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	57450723	57452096	.	-	.	ID=FBgn0051694.2.mrna2;geneID=FBgn0051694.2.path2;Name=FBgn0051694.2;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1363;mismatches=11;indels=0;unknowns=0;Target=FBgn0051694.2 1374 1 .;locus=RLOC_00003302
ChrX	stalkie_big_nohaplotig	exon	57450723	57452096	99	-	.	Parent=FBgn0051694.2.mrna2
ChrX	stalkie_big_nohaplotig	CDS	57450723	57452096	.	-	0	Parent=FBgn0051694.2.mrna2
ChrX	gffcl	locus	57466019	57501606	.	+	.	ID=RLOC_00003303;geneIDs=ORF2921.path1,comp163039_c0_seq1.path1;transcripts=comp163039_c0_seq1.mrna1,ORF2921.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57466019	57501606	.	+	.	ID=comp163039_c0_seq1.mrna1;geneID=comp163039_c0_seq1.path1;Name=comp163039_c0_seq1;Dir=sensecoverage=100.0;identity=96.6;matches=1534;mismatches=51;indels=3;unknowns=0;Target=comp163039_c0_seq1 767 922 +;locus=RLOC_00003303
ChrX	stalkie_big_nohaplotig	exon	57466019	57466406	96	+	.	Parent=comp163039_c0_seq1.mrna1;Target=comp163039_c0_seq1 1 389 +
ChrX	stalkie_big_nohaplotig	exon	57500347	57500616	94	+	.	Parent=comp163039_c0_seq1.mrna1;Target=comp163039_c0_seq1 390 659 +
ChrX	stalkie_big_nohaplotig	exon	57500679	57501606	97	+	.	Parent=comp163039_c0_seq1.mrna1;Target=comp163039_c0_seq1 660 1587 +
ChrX	stalkie_big_nohaplotig	CDS	57500786	57500941	.	+	0	Parent=comp163039_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57466094	57500938	.	+	.	ID=ORF2921.mrna1;geneID=ORF2921.path1;Name=ORF2921;Dir=sensecoverage=100.0;identity=97.3;matches=768;mismatches=21;indels=0;unknowns=0;locus=RLOC_00003303
ChrX	stalkie_big_nohaplotig	exon	57466094	57466244	99	+	.	Parent=ORF2921.mrna1;Target=ORF2921 1 151 +
ChrX	stalkie_big_nohaplotig	exon	57466299	57466406	98	+	.	Parent=ORF2921.mrna1;Target=ORF2921 152 259 +
ChrX	stalkie_big_nohaplotig	exon	57500347	57500616	94	+	.	Parent=ORF2921.mrna1;Target=ORF2921 260 529 +
ChrX	stalkie_big_nohaplotig	exon	57500679	57500938	98	+	.	Parent=ORF2921.mrna1;Target=ORF2921 530 789 +
ChrX	stalkie_big_nohaplotig	CDS	57466094	57466244	.	+	0	Parent=ORF2921.mrna1;Target=ORF2921 1 151 +
ChrX	stalkie_big_nohaplotig	CDS	57466299	57466406	.	+	2	Parent=ORF2921.mrna1;Target=ORF2921 152 259 +
ChrX	stalkie_big_nohaplotig	CDS	57500347	57500616	.	+	2	Parent=ORF2921.mrna1;Target=ORF2921 260 529 +
ChrX	stalkie_big_nohaplotig	CDS	57500679	57500938	.	+	2	Parent=ORF2921.mrna1;Target=ORF2921 530 789 +
ChrX	gffcl	locus	57472708	57604245	.	-	.	ID=RLOC_00003304;geneIDs=comp155572_c0_seq1.path1;transcripts=comp155572_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57472708	57604245	.	-	.	ID=comp155572_c0_seq1.mrna1;geneID=comp155572_c0_seq1.path1;Name=comp155572_c0_seq1;Dir=indeterminatecoverage=96.4;identity=97.3;matches=587;mismatches=9;indels=7;unknowns=0;Target=comp155572_c0_seq1 525 379 .;locus=RLOC_00003304
ChrX	stalkie_big_nohaplotig	exon	57472708	57473032	98	-	.	Parent=comp155572_c0_seq1.mrna1;Target=comp155572_c0_seq1 607 283 .
ChrX	stalkie_big_nohaplotig	exon	57603968	57604245	95	-	.	Parent=comp155572_c0_seq1.mrna1;Target=comp155572_c0_seq1 282 12 .
ChrX	stalkie_big_nohaplotig	CDS	57472790	57472936	.	-	0	Parent=comp155572_c0_seq1.mrna1
ChrX	gffcl	locus	57479802	57480794	.	-	.	ID=RLOC_00003305;geneIDs=FBgn0042125.1.path1;transcripts=FBgn0042125.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57479802	57480794	.	-	.	ID=FBgn0042125.1.mrna1;geneID=FBgn0042125.1.path1;Name=FBgn0042125.1;Dir=indeterminatecoverage=99.1;identity=86.7;matches=892;mismatches=98;indels=39;unknowns=0;Target=FBgn0042125.1 1026 1 .;locus=RLOC_00003305
ChrX	stalkie_big_nohaplotig	exon	57479802	57480794	86	-	.	Parent=FBgn0042125.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	57479802	57480794	.	-	0	Parent=FBgn0042125.1.mrna1
ChrX	gffcl	locus	57516526	57574383	.	+	.	ID=RLOC_00003306;geneIDs=FBgn0038976.2.path1;transcripts=FBgn0038976.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57516526	57574383	.	+	.	ID=FBgn0038976.2.mrna1;geneID=FBgn0038976.2.path1;Name=FBgn0038976.2;Dir=sensecoverage=100.0;identity=99.4;matches=462;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003306
ChrX	stalkie_big_nohaplotig	exon	57516526	57516624	100	+	.	Parent=FBgn0038976.2.mrna1;Target=FBgn0038976.2 1 99 +
ChrX	stalkie_big_nohaplotig	exon	57516691	57516900	99	+	.	Parent=FBgn0038976.2.mrna1;Target=FBgn0038976.2 100 309 +
ChrX	stalkie_big_nohaplotig	exon	57574228	57574383	99	+	.	Parent=FBgn0038976.2.mrna1;Target=FBgn0038976.2 310 465 +
ChrX	stalkie_big_nohaplotig	CDS	57516526	57516624	.	+	0	Parent=FBgn0038976.2.mrna1;Target=FBgn0038976.2 1 99 +
ChrX	stalkie_big_nohaplotig	CDS	57516691	57516900	.	+	0	Parent=FBgn0038976.2.mrna1;Target=FBgn0038976.2 100 309 +
ChrX	stalkie_big_nohaplotig	CDS	57574228	57574383	.	+	0	Parent=FBgn0038976.2.mrna1;Target=FBgn0038976.2 310 465 +
ChrX	gffcl	locus	57548302	57548772	.	+	.	ID=RLOC_00003308;geneIDs=FBgn0000253.7.path1;transcripts=FBgn0000253.7.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57548302	57548772	.	+	.	ID=FBgn0000253.7.mrna1;geneID=FBgn0000253.7.path1;Name=FBgn0000253.7;Dir=indeterminatecoverage=100.0;identity=100.0;matches=471;mismatches=0;indels=0;unknowns=0;Target=FBgn0000253.7 471 1 .;locus=RLOC_00003308
ChrX	stalkie_big_nohaplotig	exon	57548302	57548772	100	+	.	Parent=FBgn0000253.7.mrna1
ChrX	stalkie_big_nohaplotig	CDS	57548302	57548772	.	+	0	Parent=FBgn0000253.7.mrna1
ChrX	gffcl	locus	57575049	57575451	.	-	.	ID=RLOC_00003309;geneIDs=comp153615_c1_seq1.path3;transcripts=comp153615_c1_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	57575049	57575451	.	-	.	ID=comp153615_c1_seq1.mrna3;geneID=comp153615_c1_seq1.path3;Name=comp153615_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=403;mismatches=0;indels=0;unknowns=0;Target=comp153615_c1_seq1 403 1 .;CDS_Target=comp153615_c1_seq1 96 1 .;locus=RLOC_00003309
ChrX	stalkie_big_nohaplotig	exon	57575049	57575451	100	-	.	Parent=comp153615_c1_seq1.mrna3
ChrX	stalkie_big_nohaplotig	CDS	57575356	57575451	.	-	0	Parent=comp153615_c1_seq1.mrna3
ChrX	gffcl	locus	57589726	57590985	.	-	.	ID=RLOC_00003310;geneIDs=comp151653_c0_seq1.path1;transcripts=comp151653_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57589726	57590985	.	-	.	ID=comp151653_c0_seq1.mrna1;geneID=comp151653_c0_seq1.path1;Name=comp151653_c0_seq1;Dir=sensecoverage=97.4;identity=100.0;matches=817;mismatches=0;indels=0;unknowns=0;Target=comp151653_c0_seq1 375 701 +;locus=RLOC_00003310
ChrX	stalkie_big_nohaplotig	exon	57589726	57590186	100	-	.	Parent=comp151653_c0_seq1.mrna1;Target=comp151653_c0_seq1 362 822 +
ChrX	stalkie_big_nohaplotig	exon	57590255	57590329	100	-	.	Parent=comp151653_c0_seq1.mrna1;Target=comp151653_c0_seq1 287 361 +
ChrX	stalkie_big_nohaplotig	exon	57590486	57590715	100	-	.	Parent=comp151653_c0_seq1.mrna1;Target=comp151653_c0_seq1 57 286 +
ChrX	stalkie_big_nohaplotig	exon	57590935	57590985	100	-	.	Parent=comp151653_c0_seq1.mrna1;Target=comp151653_c0_seq1 6 56 +
ChrX	stalkie_big_nohaplotig	CDS	57589847	57590173	.	-	0	Parent=comp151653_c0_seq1.mrna1
ChrX	gffcl	locus	57594617	57595399	.	-	.	ID=RLOC_00003311;geneIDs=FBgn0022959.2.path1;transcripts=FBgn0022959.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57594617	57595399	.	-	.	ID=FBgn0022959.2.mrna1;geneID=FBgn0022959.2.path1;Name=FBgn0022959.2;Dir=indeterminatecoverage=100.0;identity=99.9;matches=782;mismatches=1;indels=0;unknowns=0;Target=FBgn0022959.2 783 1 .;locus=RLOC_00003311
ChrX	stalkie_big_nohaplotig	exon	57594617	57595399	99	-	.	Parent=FBgn0022959.2.mrna1
ChrX	stalkie_big_nohaplotig	CDS	57594617	57595399	.	-	0	Parent=FBgn0022959.2.mrna1
ChrX	gffcl	locus	57611730	57615485	.	+	.	ID=RLOC_00003312;geneIDs=FBgn0261477.2.path1;transcripts=FBgn0261477.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57611730	57615485	.	+	.	ID=FBgn0261477.2.mrna1;geneID=FBgn0261477.2.path1;Name=FBgn0261477.2;Dir=sensecoverage=100.0;identity=99.2;matches=1512;mismatches=12;indels=0;unknowns=0;locus=RLOC_00003312
ChrX	stalkie_big_nohaplotig	exon	57611730	57611790	96	+	.	Parent=FBgn0261477.2.mrna1;Target=FBgn0261477.2 1 61 +
ChrX	stalkie_big_nohaplotig	exon	57614023	57615485	99	+	.	Parent=FBgn0261477.2.mrna1;Target=FBgn0261477.2 62 1524 +
ChrX	stalkie_big_nohaplotig	CDS	57611730	57611790	.	+	0	Parent=FBgn0261477.2.mrna1;Target=FBgn0261477.2 1 61 +
ChrX	stalkie_big_nohaplotig	CDS	57614023	57615485	.	+	2	Parent=FBgn0261477.2.mrna1;Target=FBgn0261477.2 62 1524 +
ChrX	gffcl	locus	57624287	57625054	.	+	.	ID=RLOC_00003313;geneIDs=comp151359_c0_seq1.path1;transcripts=comp151359_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57624287	57625054	.	+	.	ID=comp151359_c0_seq1.mrna1;geneID=comp151359_c0_seq1.path1;Name=comp151359_c0_seq1;Dir=antisensecoverage=98.5;identity=99.3;matches=667;mismatches=5;indels=0;unknowns=0;Target=comp151359_c0_seq1 291 680 .;locus=RLOC_00003313
ChrX	stalkie_big_nohaplotig	exon	57624287	57624843	99	+	.	Parent=comp151359_c0_seq1.mrna1;Target=comp151359_c0_seq1 126 682 -
ChrX	stalkie_big_nohaplotig	exon	57624940	57625054	98	+	.	Parent=comp151359_c0_seq1.mrna1;Target=comp151359_c0_seq1 11 125 -
ChrX	stalkie_big_nohaplotig	CDS	57624289	57624678	.	+	0	Parent=comp151359_c0_seq1.mrna1
ChrX	gffcl	locus	57629995	57630580	.	-	.	ID=RLOC_00003314;geneIDs=comp170612_c0_seq1.path1;transcripts=comp170612_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57629995	57630580	.	-	.	ID=comp170612_c0_seq1.mrna1;geneID=comp170612_c0_seq1.path1;Name=comp170612_c0_seq1;Dir=indeterminatecoverage=36.0;identity=99.5;matches=584;mismatches=2;indels=1;unknowns=0;Target=comp170612_c0_seq1 1628 1042 .;CDS_Target=comp170612_c0_seq1 1317 1255 .;locus=RLOC_00003314
ChrX	stalkie_big_nohaplotig	exon	57629995	57630580	99	-	.	Parent=comp170612_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	57630306	57630368	.	-	0	Parent=comp170612_c0_seq1.mrna1
ChrX	gffcl	locus	57637152	57645879	.	-	.	ID=RLOC_00003315;geneIDs=AAEL002910.1.path1;transcripts=AAEL002910.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57637152	57645879	.	-	.	ID=AAEL002910.1.mrna1;geneID=AAEL002910.1.path1;Name=AAEL002910.1;Dir=sensecoverage=100.0;identity=97.9;matches=2232;mismatches=38;indels=10;unknowns=0;locus=RLOC_00003315
ChrX	stalkie_big_nohaplotig	exon	57637152	57637463	99	-	.	Parent=AAEL002910.1.mrna1;Target=AAEL002910.1 2047 2358 +
ChrX	stalkie_big_nohaplotig	exon	57637522	57637644	99	-	.	Parent=AAEL002910.1.mrna1;Target=AAEL002910.1 1924 2046 +
ChrX	stalkie_big_nohaplotig	exon	57637794	57637913	81	-	.	Parent=AAEL002910.1.mrna1;Target=AAEL002910.1 1804 1923 +
ChrX	stalkie_big_nohaplotig	exon	57639574	57639895	99	-	.	Parent=AAEL002910.1.mrna1;Target=AAEL002910.1 1482 1803 +
ChrX	stalkie_big_nohaplotig	exon	57639990	57640099	99	-	.	Parent=AAEL002910.1.mrna1;Target=AAEL002910.1 1372 1481 +
ChrX	stalkie_big_nohaplotig	exon	57641786	57641951	98	-	.	Parent=AAEL002910.1.mrna1;Target=AAEL002910.1 1206 1371 +
ChrX	stalkie_big_nohaplotig	exon	57642514	57642809	98	-	.	Parent=AAEL002910.1.mrna1;Target=AAEL002910.1 910 1205 +
ChrX	stalkie_big_nohaplotig	exon	57643034	57643507	97	-	.	Parent=AAEL002910.1.mrna1;Target=AAEL002910.1 436 909 +
ChrX	stalkie_big_nohaplotig	exon	57643583	57643870	99	-	.	Parent=AAEL002910.1.mrna1;Target=AAEL002910.1 148 435 +
ChrX	stalkie_big_nohaplotig	exon	57645817	57645879	100	-	.	Parent=AAEL002910.1.mrna1;Target=AAEL002910.1 1 63 +
ChrX	stalkie_big_nohaplotig	CDS	57637152	57637463	.	-	0	Parent=AAEL002910.1.mrna1;Target=AAEL002910.1 2047 2358 +
ChrX	stalkie_big_nohaplotig	CDS	57637522	57637644	.	-	0	Parent=AAEL002910.1.mrna1;Target=AAEL002910.1 1924 2046 +
ChrX	stalkie_big_nohaplotig	CDS	57637794	57637913	.	-	0	Parent=AAEL002910.1.mrna1;Target=AAEL002910.1 1804 1923 +
ChrX	stalkie_big_nohaplotig	CDS	57639574	57639895	.	-	1	Parent=AAEL002910.1.mrna1;Target=AAEL002910.1 1482 1803 +
ChrX	stalkie_big_nohaplotig	CDS	57639990	57640099	.	-	0	Parent=AAEL002910.1.mrna1;Target=AAEL002910.1 1372 1481 +
ChrX	stalkie_big_nohaplotig	CDS	57641786	57641951	.	-	1	Parent=AAEL002910.1.mrna1;Target=AAEL002910.1 1206 1371 +
ChrX	stalkie_big_nohaplotig	CDS	57642514	57642809	.	-	0	Parent=AAEL002910.1.mrna1;Target=AAEL002910.1 910 1205 +
ChrX	stalkie_big_nohaplotig	CDS	57643034	57643507	.	-	0	Parent=AAEL002910.1.mrna1;Target=AAEL002910.1 436 909 +
ChrX	stalkie_big_nohaplotig	CDS	57643583	57643762	.	-	0	Parent=AAEL002910.1.mrna1;Target=AAEL002910.1 256 435 +
ChrX	gffcl	locus	57688399	57727125	.	-	.	ID=RLOC_00003317;geneIDs=FBgn0015268.5.path1;transcripts=FBgn0015268.5.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57688399	57727125	.	-	.	ID=FBgn0015268.5.mrna1;geneID=FBgn0015268.5.path1;Name=FBgn0015268.5;Dir=sensecoverage=100.0;identity=94.0;matches=1151;mismatches=28;indels=45;unknowns=0;locus=RLOC_00003317
ChrX	stalkie_big_nohaplotig	exon	57688399	57688680	80	-	.	Parent=FBgn0015268.5.mrna1;Target=FBgn0015268.5 943 1179 +
ChrX	stalkie_big_nohaplotig	exon	57725818	57726695	97	-	.	Parent=FBgn0015268.5.mrna1;Target=FBgn0015268.5 65 942 +
ChrX	stalkie_big_nohaplotig	exon	57727062	57727125	100	-	.	Parent=FBgn0015268.5.mrna1;Target=FBgn0015268.5 1 64 +
ChrX	stalkie_big_nohaplotig	CDS	57688399	57688680	.	-	0	Parent=FBgn0015268.5.mrna1;Target=FBgn0015268.5 943 1179 +
ChrX	stalkie_big_nohaplotig	CDS	57725818	57726695	.	-	2	Parent=FBgn0015268.5.mrna1;Target=FBgn0015268.5 65 942 +
ChrX	stalkie_big_nohaplotig	CDS	57727062	57727125	.	-	0	Parent=FBgn0015268.5.mrna1;Target=FBgn0015268.5 1 64 +
ChrX	gffcl	locus	57694573	57695946	.	+	.	ID=RLOC_00003318;geneIDs=FBgn0051694.2.path1;transcripts=FBgn0051694.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57694573	57695946	.	+	.	ID=FBgn0051694.2.mrna1;geneID=FBgn0051694.2.path1;Name=FBgn0051694.2;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1366;mismatches=8;indels=0;unknowns=0;Target=FBgn0051694.2 1374 1 .;locus=RLOC_00003318
ChrX	stalkie_big_nohaplotig	exon	57694573	57695946	99	+	.	Parent=FBgn0051694.2.mrna1
ChrX	stalkie_big_nohaplotig	CDS	57694573	57695946	.	+	0	Parent=FBgn0051694.2.mrna1
ChrX	gffcl	locus	57719399	57719947	.	-	.	ID=RLOC_00003319;geneIDs=FBgn0031068.2.path1;transcripts=FBgn0031068.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57719399	57719947	.	-	.	ID=FBgn0031068.2.mrna1;geneID=FBgn0031068.2.path1;Name=FBgn0031068.2;Dir=sensecoverage=100.0;identity=99.2;matches=485;mismatches=4;indels=0;unknowns=0;locus=RLOC_00003319
ChrX	stalkie_big_nohaplotig	exon	57719399	57719874	99	-	.	Parent=FBgn0031068.2.mrna1;Target=FBgn0031068.2 14 489 +
ChrX	stalkie_big_nohaplotig	exon	57719935	57719947	100	-	.	Parent=FBgn0031068.2.mrna1;Target=FBgn0031068.2 1 13 +
ChrX	stalkie_big_nohaplotig	CDS	57719399	57719874	.	-	2	Parent=FBgn0031068.2.mrna1;Target=FBgn0031068.2 14 489 +
ChrX	stalkie_big_nohaplotig	CDS	57719935	57719947	.	-	0	Parent=FBgn0031068.2.mrna1;Target=FBgn0031068.2 1 13 +
ChrX	gffcl	locus	57750732	57751223	.	-	.	ID=RLOC_00003320;geneIDs=comp134643_c0_seq1.path1;transcripts=comp134643_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57750732	57751223	.	-	.	ID=comp134643_c0_seq1.mrna1;geneID=comp134643_c0_seq1.path1;Name=comp134643_c0_seq1;Dir=sensecoverage=99.5;identity=100.0;matches=378;mismatches=0;indels=0;unknowns=0;Target=comp134643_c0_seq1 180 347 +;locus=RLOC_00003320
ChrX	stalkie_big_nohaplotig	exon	57750732	57750942	100	-	.	Parent=comp134643_c0_seq1.mrna1;Target=comp134643_c0_seq1 168 378 +
ChrX	stalkie_big_nohaplotig	exon	57751057	57751223	100	-	.	Parent=comp134643_c0_seq1.mrna1;Target=comp134643_c0_seq1 1 167 +
ChrX	stalkie_big_nohaplotig	CDS	57750763	57750930	.	-	0	Parent=comp134643_c0_seq1.mrna1
ChrX	gffcl	locus	57834237	57835144	.	-	.	ID=RLOC_00003321;geneIDs=comp173696_c0_seq1.path1;transcripts=comp173696_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57834237	57835144	.	-	.	ID=comp173696_c0_seq1.mrna1;geneID=comp173696_c0_seq1.path1;Name=comp173696_c0_seq1;Dir=indeterminatecoverage=97.5;identity=98.0;matches=349;mismatches=7;indels=0;unknowns=0;Target=comp173696_c0_seq1 55 8 .;locus=RLOC_00003321
ChrX	stalkie_big_nohaplotig	exon	57834237	57834353	98	-	.	Parent=comp173696_c0_seq1.mrna1;Target=comp173696_c0_seq1 363 247 .
ChrX	stalkie_big_nohaplotig	exon	57834906	57835144	97	-	.	Parent=comp173696_c0_seq1.mrna1;Target=comp173696_c0_seq1 246 8 .
ChrX	stalkie_big_nohaplotig	CDS	57835097	57835144	.	-	0	Parent=comp173696_c0_seq1.mrna1
ChrX	gffcl	locus	57834433	57834681	.	-	.	ID=RLOC_00003322;geneIDs=comp346636_c0_seq1.path2;transcripts=comp346636_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	57834433	57834681	.	-	.	ID=comp346636_c0_seq1.mrna2;geneID=comp346636_c0_seq1.path2;Name=comp346636_c0_seq1;Dir=indeterminatecoverage=97.6;identity=95.6;matches=238;mismatches=11;indels=0;unknowns=0;Target=comp346636_c0_seq1 255 7 .;CDS_Target=comp346636_c0_seq1 62 9 .;locus=RLOC_00003322
ChrX	stalkie_big_nohaplotig	exon	57834433	57834681	95	-	.	Parent=comp346636_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	57834626	57834679	.	-	0	Parent=comp346636_c0_seq1.mrna2
ChrX	gffcl	locus	57839599	57840969	.	+	.	ID=RLOC_00003323;geneIDs=FBgn0015268.7.path1;transcripts=FBgn0015268.7.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57839599	57840969	.	+	.	ID=FBgn0015268.7.mrna1;geneID=FBgn0015268.7.path1;Name=FBgn0015268.7;Dir=sensecoverage=100.0;identity=98.1;matches=1159;mismatches=23;indels=0;unknowns=0;locus=RLOC_00003323
ChrX	stalkie_big_nohaplotig	exon	57839599	57839641	100	+	.	Parent=FBgn0015268.7.mrna1;Target=FBgn0015268.7 1 43 +
ChrX	stalkie_big_nohaplotig	exon	57839831	57840969	97	+	.	Parent=FBgn0015268.7.mrna1;Target=FBgn0015268.7 44 1182 +
ChrX	stalkie_big_nohaplotig	CDS	57839599	57839641	.	+	0	Parent=FBgn0015268.7.mrna1;Target=FBgn0015268.7 1 43 +
ChrX	stalkie_big_nohaplotig	CDS	57839831	57840969	.	+	2	Parent=FBgn0015268.7.mrna1;Target=FBgn0015268.7 44 1182 +
ChrX	gffcl	locus	57929917	57930179	.	-	.	ID=RLOC_00003324;geneIDs=comp103709_c0_seq1.path1;transcripts=comp103709_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57929917	57930179	.	-	.	ID=comp103709_c0_seq1.mrna1;geneID=comp103709_c0_seq1.path1;Name=comp103709_c0_seq1;Dir=indeterminatecoverage=98.1;identity=97.7;matches=257;mismatches=5;indels=1;unknowns=0;Target=comp103709_c0_seq1 262 1 .;CDS_Target=comp103709_c0_seq1 90 1 .;locus=RLOC_00003324
ChrX	stalkie_big_nohaplotig	exon	57929917	57930179	97	-	.	Parent=comp103709_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	57930090	57930179	.	-	0	Parent=comp103709_c0_seq1.mrna1
ChrX	gffcl	locus	57965342	57965866	.	+	.	ID=RLOC_00003325;geneIDs=FBgn0026373.3.path1;transcripts=FBgn0026373.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57965342	57965866	.	+	.	ID=FBgn0026373.3.mrna1;geneID=FBgn0026373.3.path1;Name=FBgn0026373.3;Dir=indeterminatecoverage=100.0;identity=99.8;matches=524;mismatches=1;indels=0;unknowns=0;Target=FBgn0026373.3 525 1 .;locus=RLOC_00003325
ChrX	stalkie_big_nohaplotig	exon	57965342	57965866	99	+	.	Parent=FBgn0026373.3.mrna1
ChrX	stalkie_big_nohaplotig	CDS	57965342	57965866	.	+	0	Parent=FBgn0026373.3.mrna1
ChrX	gffcl	locus	57974349	57975265	.	+	.	ID=RLOC_00003326;geneIDs=comp156824_c0_seq1.path1;transcripts=comp156824_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57974349	57975265	.	+	.	ID=comp156824_c0_seq1.mrna1;geneID=comp156824_c0_seq1.path1;Name=comp156824_c0_seq1;Dir=indeterminatecoverage=99.7;identity=97.8;matches=897;mismatches=11;indels=9;unknowns=0;Target=comp156824_c0_seq1 911 4 .;CDS_Target=comp156824_c0_seq1 744 61 .;locus=RLOC_00003326
ChrX	stalkie_big_nohaplotig	exon	57974349	57975265	97	+	.	Parent=comp156824_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	57974406	57975089	.	+	0	Parent=comp156824_c0_seq1.mrna1
ChrX	gffcl	locus	57979424	57980365	.	+	.	ID=RLOC_00003327;geneIDs=comp158595_c0_seq1.path1;transcripts=comp158595_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	57979424	57980365	.	+	.	ID=comp158595_c0_seq1.mrna1;geneID=comp158595_c0_seq1.path1;Name=comp158595_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=933;mismatches=9;indels=1;unknowns=0;Target=comp158595_c0_seq1 943 1 .;CDS_Target=comp158595_c0_seq1 638 3 .;locus=RLOC_00003327
ChrX	stalkie_big_nohaplotig	exon	57979424	57980365	98	+	.	Parent=comp158595_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	57979426	57980060	.	+	0	Parent=comp158595_c0_seq1.mrna1
ChrX	gffcl	locus	58005226	58028275	.	.	.	ID=RLOC_00003328;geneIDs=FBgn0028527.1.path1,comp116940_c0_seq1.path1,comp155325_c2_seq1.path1;transcripts=FBgn0028527.1.mrna1,comp155325_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58005226	58027570	.	-	.	ID=FBgn0028527.1.mrna1;geneID=FBgn0028527.1.path1;Name=FBgn0028527.1;Dir=sensecoverage=100.0;identity=100.0;matches=1650;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003328
ChrX	stalkie_big_nohaplotig	exon	58005226	58005278	100	-	.	Parent=FBgn0028527.1.mrna1;Target=FBgn0028527.1 1598 1650 +
ChrX	stalkie_big_nohaplotig	exon	58008152	58008311	100	-	.	Parent=FBgn0028527.1.mrna1;Target=FBgn0028527.1 1438 1597 +
ChrX	stalkie_big_nohaplotig	exon	58015468	58015989	100	-	.	Parent=FBgn0028527.1.mrna1;Target=FBgn0028527.1 916 1437 +
ChrX	stalkie_big_nohaplotig	exon	58016053	58016168	100	-	.	Parent=FBgn0028527.1.mrna1;Target=FBgn0028527.1 800 915 +
ChrX	stalkie_big_nohaplotig	exon	58017985	58018276	100	-	.	Parent=FBgn0028527.1.mrna1;Target=FBgn0028527.1 508 799 +
ChrX	stalkie_big_nohaplotig	exon	58027064	58027570	100	-	.	Parent=FBgn0028527.1.mrna1;Target=FBgn0028527.1 1 507 +
ChrX	stalkie_big_nohaplotig	CDS	58005226	58005278	.	-	2	Parent=FBgn0028527.1.mrna1;Target=FBgn0028527.1 1598 1650 +
ChrX	stalkie_big_nohaplotig	CDS	58008152	58008311	.	-	0	Parent=FBgn0028527.1.mrna1;Target=FBgn0028527.1 1438 1597 +
ChrX	stalkie_big_nohaplotig	CDS	58015468	58015989	.	-	0	Parent=FBgn0028527.1.mrna1;Target=FBgn0028527.1 916 1437 +
ChrX	stalkie_big_nohaplotig	CDS	58016053	58016168	.	-	2	Parent=FBgn0028527.1.mrna1;Target=FBgn0028527.1 800 915 +
ChrX	stalkie_big_nohaplotig	CDS	58017985	58018276	.	-	0	Parent=FBgn0028527.1.mrna1;Target=FBgn0028527.1 508 799 +
ChrX	stalkie_big_nohaplotig	CDS	58027064	58027570	.	-	0	Parent=FBgn0028527.1.mrna1;Target=FBgn0028527.1 1 507 +
ChrX	stalkie_big_nohaplotig	mRNA	58007952	58027698	.	-	.	ID=comp155325_c2_seq1.mrna1;geneID=comp155325_c2_seq1.path1;Name=comp155325_c2_seq1;Dir=sensecoverage=99.9;identity=100.0;matches=1925;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003328
ChrX	stalkie_big_nohaplotig	exon	58007952	58008311	100	-	.	Parent=comp155325_c2_seq1.mrna1;Target=comp155325_c2_seq1 1567 1926 +
ChrX	stalkie_big_nohaplotig	exon	58015468	58015989	100	-	.	Parent=comp155325_c2_seq1.mrna1;Target=comp155325_c2_seq1 1045 1566 +
ChrX	stalkie_big_nohaplotig	exon	58016053	58016168	100	-	.	Parent=comp155325_c2_seq1.mrna1;Target=comp155325_c2_seq1 929 1044 +
ChrX	stalkie_big_nohaplotig	exon	58017985	58018276	100	-	.	Parent=comp155325_c2_seq1.mrna1;Target=comp155325_c2_seq1 637 928 +
ChrX	stalkie_big_nohaplotig	exon	58027064	58027698	100	-	.	Parent=comp155325_c2_seq1.mrna1;Target=comp155325_c2_seq1 2 636 +
ChrX	stalkie_big_nohaplotig	CDS	58008090	58008311	.	-	0	Parent=comp155325_c2_seq1.mrna1;Target=comp155325_c2_seq1 1567 1788 +
ChrX	stalkie_big_nohaplotig	CDS	58015468	58015989	.	-	0	Parent=comp155325_c2_seq1.mrna1;Target=comp155325_c2_seq1 1045 1566 +
ChrX	stalkie_big_nohaplotig	CDS	58016053	58016168	.	-	2	Parent=comp155325_c2_seq1.mrna1;Target=comp155325_c2_seq1 929 1044 +
ChrX	stalkie_big_nohaplotig	CDS	58017985	58018276	.	-	0	Parent=comp155325_c2_seq1.mrna1;Target=comp155325_c2_seq1 637 928 +
ChrX	stalkie_big_nohaplotig	CDS	58027064	58027555	.	-	0	Parent=comp155325_c2_seq1.mrna1;Target=comp155325_c2_seq1 145 636 +
ChrX	gffcl	locus	58044866	58047063	.	-	.	ID=RLOC_00003329;geneIDs=comp62449_c0_seq1.path1;transcripts=comp62449_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58044866	58047063	.	-	.	ID=comp62449_c0_seq1.mrna1;geneID=comp62449_c0_seq1.path1;Name=comp62449_c0_seq1;Dir=sensecoverage=99.8;identity=99.5;matches=401;mismatches=1;indels=1;unknowns=0;Target=comp62449_c0_seq1 192 344 +;locus=RLOC_00003329
ChrX	stalkie_big_nohaplotig	exon	58044866	58045112	100	-	.	Parent=comp62449_c0_seq1.mrna1;Target=comp62449_c0_seq1 157 403 +
ChrX	stalkie_big_nohaplotig	exon	58046909	58047063	98	-	.	Parent=comp62449_c0_seq1.mrna1;Target=comp62449_c0_seq1 1 156 +
ChrX	stalkie_big_nohaplotig	CDS	58044925	58045077	.	-	0	Parent=comp62449_c0_seq1.mrna1
ChrX	gffcl	locus	58054348	58055118	.	+	.	ID=RLOC_00003330;geneIDs=comp151887_c0_seq1.path1;transcripts=comp151887_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58054348	58055118	.	+	.	ID=comp151887_c0_seq1.mrna1;geneID=comp151887_c0_seq1.path1;Name=comp151887_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=621;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003330
ChrX	stalkie_big_nohaplotig	exon	58054348	58054436	100	+	.	Parent=comp151887_c0_seq1.mrna1;Target=comp151887_c0_seq1 1 89 +
ChrX	stalkie_big_nohaplotig	exon	58054505	58054751	100	+	.	Parent=comp151887_c0_seq1.mrna1;Target=comp151887_c0_seq1 90 336 +
ChrX	stalkie_big_nohaplotig	exon	58054831	58055118	98	+	.	Parent=comp151887_c0_seq1.mrna1;Target=comp151887_c0_seq1 337 624 +
ChrX	stalkie_big_nohaplotig	CDS	58054518	58054751	.	+	0	Parent=comp151887_c0_seq1.mrna1;Target=comp151887_c0_seq1 103 336 +
ChrX	stalkie_big_nohaplotig	CDS	58054831	58055049	.	+	0	Parent=comp151887_c0_seq1.mrna1;Target=comp151887_c0_seq1 337 555 +
ChrX	gffcl	locus	58075554	58079456	.	+	.	ID=RLOC_00003331;geneIDs=ORF31.path1;transcripts=ORF31.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58075554	58079456	.	+	.	ID=ORF31.mrna1;geneID=ORF31.path1;Name=ORF31;Dir=sensecoverage=100.0;identity=99.8;matches=3762;mismatches=6;indels=0;unknowns=0;locus=RLOC_00003331
ChrX	stalkie_big_nohaplotig	exon	58075554	58076580	99	+	.	Parent=ORF31.mrna1;Target=ORF31 1 1027 +
ChrX	stalkie_big_nohaplotig	exon	58076653	58076805	99	+	.	Parent=ORF31.mrna1;Target=ORF31 1028 1180 +
ChrX	stalkie_big_nohaplotig	exon	58076869	58079456	99	+	.	Parent=ORF31.mrna1;Target=ORF31 1181 3768 +
ChrX	stalkie_big_nohaplotig	CDS	58075554	58076580	.	+	0	Parent=ORF31.mrna1;Target=ORF31 1 1027 +
ChrX	stalkie_big_nohaplotig	CDS	58076653	58076805	.	+	2	Parent=ORF31.mrna1;Target=ORF31 1028 1180 +
ChrX	stalkie_big_nohaplotig	CDS	58076869	58079456	.	+	2	Parent=ORF31.mrna1;Target=ORF31 1181 3768 +
ChrX	gffcl	locus	58080075	58082047	.	+	.	ID=RLOC_00003332;geneIDs=ORF1164.path1;transcripts=ORF1164.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58080075	58082047	.	+	.	ID=ORF1164.mrna1;geneID=ORF1164.path1;Name=ORF1164;Dir=sensecoverage=100.0;identity=99.8;matches=1201;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003332
ChrX	stalkie_big_nohaplotig	exon	58080075	58080861	99	+	.	Parent=ORF1164.mrna1;Target=ORF1164 1 787 +
ChrX	stalkie_big_nohaplotig	exon	58080922	58081059	100	+	.	Parent=ORF1164.mrna1;Target=ORF1164 788 925 +
ChrX	stalkie_big_nohaplotig	exon	58081132	58081245	100	+	.	Parent=ORF1164.mrna1;Target=ORF1164 926 1039 +
ChrX	stalkie_big_nohaplotig	exon	58081304	58081417	99	+	.	Parent=ORF1164.mrna1;Target=ORF1164 1040 1153 +
ChrX	stalkie_big_nohaplotig	exon	58081998	58082047	100	+	.	Parent=ORF1164.mrna1;Target=ORF1164 1154 1203 +
ChrX	stalkie_big_nohaplotig	CDS	58080075	58080861	.	+	0	Parent=ORF1164.mrna1;Target=ORF1164 1 787 +
ChrX	stalkie_big_nohaplotig	CDS	58080922	58081059	.	+	2	Parent=ORF1164.mrna1;Target=ORF1164 788 925 +
ChrX	stalkie_big_nohaplotig	CDS	58081132	58081245	.	+	2	Parent=ORF1164.mrna1;Target=ORF1164 926 1039 +
ChrX	stalkie_big_nohaplotig	CDS	58081304	58081417	.	+	2	Parent=ORF1164.mrna1;Target=ORF1164 1040 1153 +
ChrX	stalkie_big_nohaplotig	CDS	58081998	58082047	.	+	2	Parent=ORF1164.mrna1;Target=ORF1164 1154 1203 +
ChrX	gffcl	locus	58103990	58105798	.	-	.	ID=RLOC_00003333;geneIDs=FBgn0028372.1.path1;transcripts=FBgn0028372.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58103990	58105798	.	-	.	ID=FBgn0028372.1.mrna1;geneID=FBgn0028372.1.path1;Name=FBgn0028372.1;Dir=sensecoverage=100.0;identity=99.6;matches=1422;mismatches=6;indels=0;unknowns=0;locus=RLOC_00003333
ChrX	stalkie_big_nohaplotig	exon	58103990	58104147	100	-	.	Parent=FBgn0028372.1.mrna1;Target=FBgn0028372.1 1271 1428 +
ChrX	stalkie_big_nohaplotig	exon	58104205	58104508	99	-	.	Parent=FBgn0028372.1.mrna1;Target=FBgn0028372.1 967 1270 +
ChrX	stalkie_big_nohaplotig	exon	58104574	58104703	100	-	.	Parent=FBgn0028372.1.mrna1;Target=FBgn0028372.1 837 966 +
ChrX	stalkie_big_nohaplotig	exon	58104765	58104970	100	-	.	Parent=FBgn0028372.1.mrna1;Target=FBgn0028372.1 631 836 +
ChrX	stalkie_big_nohaplotig	exon	58105084	58105594	99	-	.	Parent=FBgn0028372.1.mrna1;Target=FBgn0028372.1 120 630 +
ChrX	stalkie_big_nohaplotig	exon	58105680	58105798	100	-	.	Parent=FBgn0028372.1.mrna1;Target=FBgn0028372.1 1 119 +
ChrX	stalkie_big_nohaplotig	CDS	58103990	58104147	.	-	2	Parent=FBgn0028372.1.mrna1;Target=FBgn0028372.1 1271 1428 +
ChrX	stalkie_big_nohaplotig	CDS	58104205	58104508	.	-	0	Parent=FBgn0028372.1.mrna1;Target=FBgn0028372.1 967 1270 +
ChrX	stalkie_big_nohaplotig	CDS	58104574	58104703	.	-	1	Parent=FBgn0028372.1.mrna1;Target=FBgn0028372.1 837 966 +
ChrX	stalkie_big_nohaplotig	CDS	58104765	58104970	.	-	0	Parent=FBgn0028372.1.mrna1;Target=FBgn0028372.1 631 836 +
ChrX	stalkie_big_nohaplotig	CDS	58105084	58105594	.	-	1	Parent=FBgn0028372.1.mrna1;Target=FBgn0028372.1 120 630 +
ChrX	stalkie_big_nohaplotig	CDS	58105680	58105798	.	-	0	Parent=FBgn0028372.1.mrna1;Target=FBgn0028372.1 1 119 +
ChrX	gffcl	locus	58113699	58115892	.	+	.	ID=RLOC_00003334;geneIDs=FBgn0020309.3.path1;transcripts=FBgn0020309.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58113699	58115892	.	+	.	ID=FBgn0020309.3.mrna1;geneID=FBgn0020309.3.path1;Name=FBgn0020309.3;Dir=sensecoverage=88.7;identity=98.6;matches=1788;mismatches=26;indels=0;unknowns=0;locus=RLOC_00003334
ChrX	stalkie_big_nohaplotig	exon	58113699	58113916	98	+	.	Parent=FBgn0020309.3.mrna1;Target=FBgn0020309.3 1 218 +
ChrX	stalkie_big_nohaplotig	exon	58114179	58114482	99	+	.	Parent=FBgn0020309.3.mrna1;Target=FBgn0020309.3 219 522 +
ChrX	stalkie_big_nohaplotig	exon	58114539	58115444	99	+	.	Parent=FBgn0020309.3.mrna1;Target=FBgn0020309.3 523 1428 +
ChrX	stalkie_big_nohaplotig	exon	58115507	58115892	96	+	.	Parent=FBgn0020309.3.mrna1;Target=FBgn0020309.3 1429 1814 +
ChrX	stalkie_big_nohaplotig	CDS	58113699	58113916	.	+	0	Parent=FBgn0020309.3.mrna1;Target=FBgn0020309.3 1 218 +
ChrX	stalkie_big_nohaplotig	CDS	58114179	58114482	.	+	1	Parent=FBgn0020309.3.mrna1;Target=FBgn0020309.3 219 522 +
ChrX	stalkie_big_nohaplotig	CDS	58114539	58115444	.	+	0	Parent=FBgn0020309.3.mrna1;Target=FBgn0020309.3 523 1428 +
ChrX	stalkie_big_nohaplotig	CDS	58115507	58115890	.	+	0	Parent=FBgn0020309.3.mrna1;Target=FBgn0020309.3 1429 1812 +
ChrX	gffcl	locus	58122710	58123192	.	+	.	ID=RLOC_00003335;geneIDs=FBgn0031068.3.path1;transcripts=FBgn0031068.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58122710	58123192	.	+	.	ID=FBgn0031068.3.mrna1;geneID=FBgn0031068.3.path1;Name=FBgn0031068.3;Dir=indeterminatecoverage=100.0;identity=98.1;matches=474;mismatches=9;indels=0;unknowns=0;Target=FBgn0031068.3 483 1 .;locus=RLOC_00003335
ChrX	stalkie_big_nohaplotig	exon	58122710	58123192	98	+	.	Parent=FBgn0031068.3.mrna1
ChrX	stalkie_big_nohaplotig	CDS	58122710	58123192	.	+	0	Parent=FBgn0031068.3.mrna1
ChrX	gffcl	locus	58133594	58135226	.	+	.	ID=RLOC_00003336;geneIDs=ORF1301.path1;transcripts=ORF1301.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58133594	58135226	.	+	.	ID=ORF1301.mrna1;geneID=ORF1301.path1;Name=ORF1301;Dir=sensecoverage=100.0;identity=99.8;matches=1147;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003336
ChrX	stalkie_big_nohaplotig	exon	58133594	58133628	100	+	.	Parent=ORF1301.mrna1;Target=ORF1301 1 35 +
ChrX	stalkie_big_nohaplotig	exon	58133685	58133791	100	+	.	Parent=ORF1301.mrna1;Target=ORF1301 36 142 +
ChrX	stalkie_big_nohaplotig	exon	58133855	58133953	100	+	.	Parent=ORF1301.mrna1;Target=ORF1301 143 241 +
ChrX	stalkie_big_nohaplotig	exon	58134012	58134302	99	+	.	Parent=ORF1301.mrna1;Target=ORF1301 242 532 +
ChrX	stalkie_big_nohaplotig	exon	58134357	58134491	100	+	.	Parent=ORF1301.mrna1;Target=ORF1301 533 667 +
ChrX	stalkie_big_nohaplotig	exon	58134546	58134683	100	+	.	Parent=ORF1301.mrna1;Target=ORF1301 668 805 +
ChrX	stalkie_big_nohaplotig	exon	58134738	58134875	100	+	.	Parent=ORF1301.mrna1;Target=ORF1301 806 943 +
ChrX	stalkie_big_nohaplotig	exon	58134938	58135003	100	+	.	Parent=ORF1301.mrna1;Target=ORF1301 944 1009 +
ChrX	stalkie_big_nohaplotig	exon	58135087	58135226	100	+	.	Parent=ORF1301.mrna1;Target=ORF1301 1010 1149 +
ChrX	stalkie_big_nohaplotig	CDS	58133594	58133628	.	+	0	Parent=ORF1301.mrna1;Target=ORF1301 1 35 +
ChrX	stalkie_big_nohaplotig	CDS	58133685	58133791	.	+	1	Parent=ORF1301.mrna1;Target=ORF1301 36 142 +
ChrX	stalkie_big_nohaplotig	CDS	58133855	58133953	.	+	2	Parent=ORF1301.mrna1;Target=ORF1301 143 241 +
ChrX	stalkie_big_nohaplotig	CDS	58134012	58134302	.	+	2	Parent=ORF1301.mrna1;Target=ORF1301 242 532 +
ChrX	stalkie_big_nohaplotig	CDS	58134357	58134491	.	+	2	Parent=ORF1301.mrna1;Target=ORF1301 533 667 +
ChrX	stalkie_big_nohaplotig	CDS	58134546	58134683	.	+	2	Parent=ORF1301.mrna1;Target=ORF1301 668 805 +
ChrX	stalkie_big_nohaplotig	CDS	58134738	58134875	.	+	2	Parent=ORF1301.mrna1;Target=ORF1301 806 943 +
ChrX	stalkie_big_nohaplotig	CDS	58134938	58135003	.	+	2	Parent=ORF1301.mrna1;Target=ORF1301 944 1009 +
ChrX	stalkie_big_nohaplotig	CDS	58135087	58135226	.	+	2	Parent=ORF1301.mrna1;Target=ORF1301 1010 1149 +
ChrX	gffcl	locus	58159307	58160104	.	+	.	ID=RLOC_00003339;geneIDs=ORF2835.path1;transcripts=ORF2835.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58159307	58160104	.	+	.	ID=ORF2835.mrna1;geneID=ORF2835.path1;Name=ORF2835;Dir=indeterminatecoverage=100.0;identity=98.1;matches=783;mismatches=15;indels=0;unknowns=0;Target=ORF2835 798 1 .;locus=RLOC_00003339
ChrX	stalkie_big_nohaplotig	exon	58159307	58160104	98	+	.	Parent=ORF2835.mrna1
ChrX	stalkie_big_nohaplotig	CDS	58159307	58160104	.	+	0	Parent=ORF2835.mrna1
ChrX	gffcl	locus	58165541	58166485	.	+	.	ID=RLOC_00003340;geneIDs=FBgn0027786.2.path1;transcripts=FBgn0027786.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58165541	58166485	.	+	.	ID=FBgn0027786.2.mrna1;geneID=FBgn0027786.2.path1;Name=FBgn0027786.2;Dir=indeterminatecoverage=100.0;identity=98.9;matches=935;mismatches=10;indels=0;unknowns=0;Target=FBgn0027786.2 945 1 .;locus=RLOC_00003340
ChrX	stalkie_big_nohaplotig	exon	58165541	58166485	98	+	.	Parent=FBgn0027786.2.mrna1
ChrX	stalkie_big_nohaplotig	CDS	58165541	58166485	.	+	0	Parent=FBgn0027786.2.mrna1
ChrX	gffcl	locus	58171033	58172125	.	+	.	ID=RLOC_00003341;geneIDs=FBgn0039471.2.path1;transcripts=FBgn0039471.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58171033	58172125	.	+	.	ID=FBgn0039471.2.mrna1;geneID=FBgn0039471.2.path1;Name=FBgn0039471.2;Dir=sensecoverage=97.8;identity=100.0;matches=1027;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003341
ChrX	stalkie_big_nohaplotig	exon	58171033	58171094	100	+	.	Parent=FBgn0039471.2.mrna1;Target=FBgn0039471.2 24 85 +
ChrX	stalkie_big_nohaplotig	exon	58171161	58172125	100	+	.	Parent=FBgn0039471.2.mrna1;Target=FBgn0039471.2 86 1050 +
ChrX	stalkie_big_nohaplotig	CDS	58171034	58171094	.	+	0	Parent=FBgn0039471.2.mrna1;Target=FBgn0039471.2 25 85 +
ChrX	stalkie_big_nohaplotig	CDS	58171161	58172125	.	+	2	Parent=FBgn0039471.2.mrna1;Target=FBgn0039471.2 86 1050 +
ChrX	gffcl	locus	58186802	58191067	.	+	.	ID=RLOC_00003342;geneIDs=FBgn0028546.1.path1;transcripts=FBgn0028546.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58186802	58191067	.	+	.	ID=FBgn0028546.1.mrna1;geneID=FBgn0028546.1.path1;Name=FBgn0028546.1;Dir=sensecoverage=100.0;identity=100.0;matches=876;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003342
ChrX	stalkie_big_nohaplotig	exon	58186802	58186967	100	+	.	Parent=FBgn0028546.1.mrna1;Target=FBgn0028546.1 1 166 +
ChrX	stalkie_big_nohaplotig	exon	58190293	58190914	100	+	.	Parent=FBgn0028546.1.mrna1;Target=FBgn0028546.1 167 788 +
ChrX	stalkie_big_nohaplotig	exon	58190980	58191067	100	+	.	Parent=FBgn0028546.1.mrna1;Target=FBgn0028546.1 789 876 +
ChrX	stalkie_big_nohaplotig	CDS	58186802	58186967	.	+	0	Parent=FBgn0028546.1.mrna1;Target=FBgn0028546.1 1 166 +
ChrX	stalkie_big_nohaplotig	CDS	58190293	58190914	.	+	2	Parent=FBgn0028546.1.mrna1;Target=FBgn0028546.1 167 788 +
ChrX	stalkie_big_nohaplotig	CDS	58190980	58191067	.	+	1	Parent=FBgn0028546.1.mrna1;Target=FBgn0028546.1 789 876 +
ChrX	gffcl	locus	58199122	58230782	.	.	.	ID=RLOC_00003343;geneIDs=FBgn0031857.1.path1,comp90320_c0_seq1.path1;transcripts=FBgn0031857.1.mrna1,comp90320_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58199122	58230782	.	-	.	ID=FBgn0031857.1.mrna1;geneID=FBgn0031857.1.path1;Name=FBgn0031857.1;Dir=sensecoverage=99.7;identity=99.8;matches=7445;mismatches=4;indels=10;unknowns=0;locus=RLOC_00003343
ChrX	stalkie_big_nohaplotig	exon	58199122	58199941	99	-	.	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 6665 7485 +
ChrX	stalkie_big_nohaplotig	exon	58200383	58203172	99	-	.	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 3866 6664 +
ChrX	stalkie_big_nohaplotig	exon	58203250	58203760	100	-	.	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 3355 3865 +
ChrX	stalkie_big_nohaplotig	exon	58204601	58204708	100	-	.	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 3247 3354 +
ChrX	stalkie_big_nohaplotig	exon	58204770	58205006	100	-	.	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 3010 3246 +
ChrX	stalkie_big_nohaplotig	exon	58225443	58225544	100	-	.	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 2908 3009 +
ChrX	stalkie_big_nohaplotig	exon	58225616	58225836	100	-	.	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 2687 2907 +
ChrX	stalkie_big_nohaplotig	exon	58226231	58227460	100	-	.	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 1457 2686 +
ChrX	stalkie_big_nohaplotig	exon	58227519	58227798	100	-	.	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 1177 1456 +
ChrX	stalkie_big_nohaplotig	exon	58228654	58228929	100	-	.	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 901 1176 +
ChrX	stalkie_big_nohaplotig	exon	58229115	58229453	100	-	.	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 562 900 +
ChrX	stalkie_big_nohaplotig	exon	58230000	58230131	100	-	.	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 430 561 +
ChrX	stalkie_big_nohaplotig	exon	58230219	58230355	100	-	.	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 293 429 +
ChrX	stalkie_big_nohaplotig	exon	58230453	58230648	100	-	.	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 97 292 +
ChrX	stalkie_big_nohaplotig	exon	58230713	58230782	100	-	.	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 27 96 +
ChrX	stalkie_big_nohaplotig	CDS	58199122	58199941	.	-	2	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 6665 7485 +
ChrX	stalkie_big_nohaplotig	CDS	58200383	58203172	.	-	2	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 3866 6664 +
ChrX	stalkie_big_nohaplotig	CDS	58203250	58203760	.	-	0	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 3355 3865 +
ChrX	stalkie_big_nohaplotig	CDS	58204601	58204708	.	-	0	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 3247 3354 +
ChrX	stalkie_big_nohaplotig	CDS	58204770	58205006	.	-	0	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 3010 3246 +
ChrX	stalkie_big_nohaplotig	CDS	58225443	58225544	.	-	0	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 2908 3009 +
ChrX	stalkie_big_nohaplotig	CDS	58225616	58225836	.	-	2	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 2687 2907 +
ChrX	stalkie_big_nohaplotig	CDS	58226231	58227460	.	-	2	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 1457 2686 +
ChrX	stalkie_big_nohaplotig	CDS	58227519	58227798	.	-	0	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 1177 1456 +
ChrX	stalkie_big_nohaplotig	CDS	58228654	58228929	.	-	0	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 901 1176 +
ChrX	stalkie_big_nohaplotig	CDS	58229115	58229453	.	-	0	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 562 900 +
ChrX	stalkie_big_nohaplotig	CDS	58230000	58230131	.	-	0	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 430 561 +
ChrX	stalkie_big_nohaplotig	CDS	58230219	58230355	.	-	2	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 293 429 +
ChrX	stalkie_big_nohaplotig	CDS	58230453	58230648	.	-	0	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 97 292 +
ChrX	stalkie_big_nohaplotig	CDS	58230713	58230781	.	-	0	Parent=FBgn0031857.1.mrna1;Target=FBgn0031857.1 28 96 +
ChrX	stalkie_big_nohaplotig	mRNA	58228909	58229138	.	+	.	ID=comp90320_c0_seq1.mrna1;geneID=comp90320_c0_seq1.path1;Name=comp90320_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=230;mismatches=0;indels=0;unknowns=0;Target=comp90320_c0_seq1 230 1 .;CDS_Target=comp90320_c0_seq1 188 3 .;locus=RLOC_00003343
ChrX	stalkie_big_nohaplotig	exon	58228909	58229138	100	+	.	Parent=comp90320_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	58228911	58229096	.	+	0	Parent=comp90320_c0_seq1.mrna1
ChrX	gffcl	locus	58211587	58217279	.	+	.	ID=RLOC_00003344;geneIDs=FBgn0261561.2.path1;transcripts=FBgn0261561.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58211587	58217279	.	+	.	ID=FBgn0261561.2.mrna1;geneID=FBgn0261561.2.path1;Name=FBgn0261561.2;Dir=sensecoverage=100.0;identity=99.6;matches=2101;mismatches=8;indels=0;unknowns=0;locus=RLOC_00003344
ChrX	stalkie_big_nohaplotig	exon	58211587	58211706	98	+	.	Parent=FBgn0261561.2.mrna1;Target=FBgn0261561.2 1 120 +
ChrX	stalkie_big_nohaplotig	exon	58211788	58211991	99	+	.	Parent=FBgn0261561.2.mrna1;Target=FBgn0261561.2 121 324 +
ChrX	stalkie_big_nohaplotig	exon	58212050	58212736	99	+	.	Parent=FBgn0261561.2.mrna1;Target=FBgn0261561.2 325 1011 +
ChrX	stalkie_big_nohaplotig	exon	58212802	58212900	100	+	.	Parent=FBgn0261561.2.mrna1;Target=FBgn0261561.2 1012 1110 +
ChrX	stalkie_big_nohaplotig	exon	58214616	58214738	100	+	.	Parent=FBgn0261561.2.mrna1;Target=FBgn0261561.2 1111 1233 +
ChrX	stalkie_big_nohaplotig	exon	58214824	58214931	100	+	.	Parent=FBgn0261561.2.mrna1;Target=FBgn0261561.2 1234 1341 +
ChrX	stalkie_big_nohaplotig	exon	58215001	58215138	100	+	.	Parent=FBgn0261561.2.mrna1;Target=FBgn0261561.2 1342 1479 +
ChrX	stalkie_big_nohaplotig	exon	58215340	58215435	100	+	.	Parent=FBgn0261561.2.mrna1;Target=FBgn0261561.2 1480 1575 +
ChrX	stalkie_big_nohaplotig	exon	58216684	58216740	100	+	.	Parent=FBgn0261561.2.mrna1;Target=FBgn0261561.2 1576 1632 +
ChrX	stalkie_big_nohaplotig	exon	58216803	58217279	99	+	.	Parent=FBgn0261561.2.mrna1;Target=FBgn0261561.2 1633 2109 +
ChrX	stalkie_big_nohaplotig	CDS	58211587	58211706	.	+	0	Parent=FBgn0261561.2.mrna1;Target=FBgn0261561.2 1 120 +
ChrX	stalkie_big_nohaplotig	CDS	58211788	58211991	.	+	0	Parent=FBgn0261561.2.mrna1;Target=FBgn0261561.2 121 324 +
ChrX	stalkie_big_nohaplotig	CDS	58212050	58212736	.	+	0	Parent=FBgn0261561.2.mrna1;Target=FBgn0261561.2 325 1011 +
ChrX	stalkie_big_nohaplotig	CDS	58212802	58212900	.	+	0	Parent=FBgn0261561.2.mrna1;Target=FBgn0261561.2 1012 1110 +
ChrX	stalkie_big_nohaplotig	CDS	58214616	58214738	.	+	0	Parent=FBgn0261561.2.mrna1;Target=FBgn0261561.2 1111 1233 +
ChrX	stalkie_big_nohaplotig	CDS	58214824	58214931	.	+	0	Parent=FBgn0261561.2.mrna1;Target=FBgn0261561.2 1234 1341 +
ChrX	stalkie_big_nohaplotig	CDS	58215001	58215138	.	+	0	Parent=FBgn0261561.2.mrna1;Target=FBgn0261561.2 1342 1479 +
ChrX	stalkie_big_nohaplotig	CDS	58215340	58215435	.	+	0	Parent=FBgn0261561.2.mrna1;Target=FBgn0261561.2 1480 1575 +
ChrX	stalkie_big_nohaplotig	CDS	58216684	58216740	.	+	0	Parent=FBgn0261561.2.mrna1;Target=FBgn0261561.2 1576 1632 +
ChrX	stalkie_big_nohaplotig	CDS	58216803	58217279	.	+	0	Parent=FBgn0261561.2.mrna1;Target=FBgn0261561.2 1633 2109 +
ChrX	gffcl	locus	58220778	58257793	.	+	.	ID=RLOC_00003346;geneIDs=FBgn0031858.1.path1,comp150507_c0_seq1.path1;transcripts=FBgn0031858.1.mrna1,comp150507_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58220778	58257793	.	+	.	ID=FBgn0031858.1.mrna1;geneID=FBgn0031858.1.path1;Name=FBgn0031858.1;Dir=sensecoverage=99.7;identity=99.5;matches=1701;mismatches=9;indels=0;unknowns=0;locus=RLOC_00003346
ChrX	stalkie_big_nohaplotig	exon	58220778	58220849	97	+	.	Parent=FBgn0031858.1.mrna1;Target=FBgn0031858.1 7 78 +
ChrX	stalkie_big_nohaplotig	exon	58253841	58253904	100	+	.	Parent=FBgn0031858.1.mrna1;Target=FBgn0031858.1 79 142 +
ChrX	stalkie_big_nohaplotig	exon	58253968	58254051	100	+	.	Parent=FBgn0031858.1.mrna1;Target=FBgn0031858.1 143 226 +
ChrX	stalkie_big_nohaplotig	exon	58254134	58254163	96	+	.	Parent=FBgn0031858.1.mrna1;Target=FBgn0031858.1 227 256 +
ChrX	stalkie_big_nohaplotig	exon	58254226	58255080	99	+	.	Parent=FBgn0031858.1.mrna1;Target=FBgn0031858.1 257 1111 +
ChrX	stalkie_big_nohaplotig	exon	58255137	58255572	99	+	.	Parent=FBgn0031858.1.mrna1;Target=FBgn0031858.1 1112 1547 +
ChrX	stalkie_big_nohaplotig	exon	58255635	58255729	100	+	.	Parent=FBgn0031858.1.mrna1;Target=FBgn0031858.1 1548 1642 +
ChrX	stalkie_big_nohaplotig	exon	58257720	58257793	98	+	.	Parent=FBgn0031858.1.mrna1;Target=FBgn0031858.1 1643 1716 +
ChrX	stalkie_big_nohaplotig	CDS	58220778	58220849	.	+	0	Parent=FBgn0031858.1.mrna1;Target=FBgn0031858.1 7 78 +
ChrX	stalkie_big_nohaplotig	CDS	58253841	58253904	.	+	0	Parent=FBgn0031858.1.mrna1;Target=FBgn0031858.1 79 142 +
ChrX	stalkie_big_nohaplotig	CDS	58253968	58254051	.	+	2	Parent=FBgn0031858.1.mrna1;Target=FBgn0031858.1 143 226 +
ChrX	stalkie_big_nohaplotig	CDS	58254134	58254163	.	+	2	Parent=FBgn0031858.1.mrna1;Target=FBgn0031858.1 227 256 +
ChrX	stalkie_big_nohaplotig	CDS	58254226	58255080	.	+	2	Parent=FBgn0031858.1.mrna1;Target=FBgn0031858.1 257 1111 +
ChrX	stalkie_big_nohaplotig	CDS	58255137	58255572	.	+	2	Parent=FBgn0031858.1.mrna1;Target=FBgn0031858.1 1112 1547 +
ChrX	stalkie_big_nohaplotig	CDS	58255635	58255729	.	+	1	Parent=FBgn0031858.1.mrna1;Target=FBgn0031858.1 1548 1642 +
ChrX	stalkie_big_nohaplotig	CDS	58257720	58257793	.	+	2	Parent=FBgn0031858.1.mrna1;Target=FBgn0031858.1 1643 1716 +
ChrX	stalkie_big_nohaplotig	mRNA	58250052	58253864	.	+	.	ID=comp150507_c0_seq1.mrna1;geneID=comp150507_c0_seq1.path1;Name=comp150507_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=794;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003346
ChrX	stalkie_big_nohaplotig	exon	58250052	58250821	100	+	.	Parent=comp150507_c0_seq1.mrna1;Target=comp150507_c0_seq1 25 794 -
ChrX	stalkie_big_nohaplotig	exon	58253841	58253864	100	+	.	Parent=comp150507_c0_seq1.mrna1;Target=comp150507_c0_seq1 1 24 -
ChrX	stalkie_big_nohaplotig	CDS	58250660	58250821	.	+	0	Parent=comp150507_c0_seq1.mrna1;Target=comp150507_c0_seq1 25 186 .
ChrX	stalkie_big_nohaplotig	CDS	58253841	58253864	.	+	0	Parent=comp150507_c0_seq1.mrna1;Target=comp150507_c0_seq1 1 24 .
ChrX	gffcl	locus	58258596	58258938	.	+	.	ID=RLOC_00003347;geneIDs=comp135172_c0_seq1.path1;transcripts=comp135172_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58258596	58258938	.	+	.	ID=comp135172_c0_seq1.mrna1;geneID=comp135172_c0_seq1.path1;Name=comp135172_c0_seq1;Dir=indeterminatecoverage=97.4;identity=100.0;matches=343;mismatches=0;indels=0;unknowns=0;Target=comp135172_c0_seq1 352 10 .;CDS_Target=comp135172_c0_seq1 144 10 .;locus=RLOC_00003347
ChrX	stalkie_big_nohaplotig	exon	58258596	58258938	100	+	.	Parent=comp135172_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	58258596	58258730	.	+	0	Parent=comp135172_c0_seq1.mrna1
ChrX	gffcl	locus	58259375	58259910	.	+	.	ID=RLOC_00003348;geneIDs=comp146390_c0_seq1.path1;transcripts=comp146390_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58259375	58259910	.	+	.	ID=comp146390_c0_seq1.mrna1;geneID=comp146390_c0_seq1.path1;Name=comp146390_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=535;mismatches=1;indels=0;unknowns=0;Target=comp146390_c0_seq1 536 1 .;CDS_Target=comp146390_c0_seq1 317 228 .;locus=RLOC_00003348
ChrX	stalkie_big_nohaplotig	exon	58259375	58259910	99	+	.	Parent=comp146390_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	58259602	58259691	.	+	0	Parent=comp146390_c0_seq1.mrna1
ChrX	gffcl	locus	58263579	58307257	.	-	.	ID=RLOC_00003349;geneIDs=FBgn0015776.1.path1;transcripts=FBgn0015776.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58263579	58307257	.	-	.	ID=FBgn0015776.1.mrna1;geneID=FBgn0015776.1.path1;Name=FBgn0015776.1;Dir=sensecoverage=100.0;identity=100.0;matches=1002;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003349
ChrX	stalkie_big_nohaplotig	exon	58263579	58263854	100	-	.	Parent=FBgn0015776.1.mrna1;Target=FBgn0015776.1 727 1002 +
ChrX	stalkie_big_nohaplotig	exon	58265482	58265753	100	-	.	Parent=FBgn0015776.1.mrna1;Target=FBgn0015776.1 455 726 +
ChrX	stalkie_big_nohaplotig	exon	58265826	58266083	100	-	.	Parent=FBgn0015776.1.mrna1;Target=FBgn0015776.1 197 454 +
ChrX	stalkie_big_nohaplotig	exon	58306468	58306620	100	-	.	Parent=FBgn0015776.1.mrna1;Target=FBgn0015776.1 44 196 +
ChrX	stalkie_big_nohaplotig	exon	58307215	58307257	100	-	.	Parent=FBgn0015776.1.mrna1;Target=FBgn0015776.1 1 43 +
ChrX	stalkie_big_nohaplotig	CDS	58263579	58263854	.	-	0	Parent=FBgn0015776.1.mrna1;Target=FBgn0015776.1 727 1002 +
ChrX	stalkie_big_nohaplotig	CDS	58265482	58265753	.	-	2	Parent=FBgn0015776.1.mrna1;Target=FBgn0015776.1 455 726 +
ChrX	stalkie_big_nohaplotig	CDS	58265826	58266083	.	-	2	Parent=FBgn0015776.1.mrna1;Target=FBgn0015776.1 197 454 +
ChrX	stalkie_big_nohaplotig	CDS	58306468	58306620	.	-	2	Parent=FBgn0015776.1.mrna1;Target=FBgn0015776.1 44 196 +
ChrX	stalkie_big_nohaplotig	CDS	58307215	58307257	.	-	0	Parent=FBgn0015776.1.mrna1;Target=FBgn0015776.1 1 43 +
ChrX	gffcl	locus	58346276	58346875	.	-	.	ID=RLOC_00003350;geneIDs=comp135549_c0_seq1.path1;transcripts=comp135549_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58346276	58346875	.	-	.	ID=comp135549_c0_seq1.mrna1;geneID=comp135549_c0_seq1.path1;Name=comp135549_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=600;mismatches=0;indels=0;unknowns=0;Target=comp135549_c0_seq1 602 3 .;CDS_Target=comp135549_c0_seq1 170 33 .;locus=RLOC_00003350
ChrX	stalkie_big_nohaplotig	exon	58346276	58346875	100	-	.	Parent=comp135549_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	58346708	58346845	.	-	0	Parent=comp135549_c0_seq1.mrna1
ChrX	gffcl	locus	58347321	58365152	.	-	.	ID=RLOC_00003351;geneIDs=FBgn0015777.1.path1;transcripts=FBgn0015777.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58347321	58365152	.	-	.	ID=FBgn0015777.1.mrna1;geneID=FBgn0015777.1.path1;Name=FBgn0015777.1;Dir=sensecoverage=100.0;identity=100.0;matches=975;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003351
ChrX	stalkie_big_nohaplotig	exon	58347321	58347421	100	-	.	Parent=FBgn0015777.1.mrna1;Target=FBgn0015777.1 875 975 +
ChrX	stalkie_big_nohaplotig	exon	58347489	58347657	100	-	.	Parent=FBgn0015777.1.mrna1;Target=FBgn0015777.1 706 874 +
ChrX	stalkie_big_nohaplotig	exon	58347735	58348027	100	-	.	Parent=FBgn0015777.1.mrna1;Target=FBgn0015777.1 413 705 +
ChrX	stalkie_big_nohaplotig	exon	58353239	58353358	100	-	.	Parent=FBgn0015777.1.mrna1;Target=FBgn0015777.1 293 412 +
ChrX	stalkie_big_nohaplotig	exon	58353430	58353570	100	-	.	Parent=FBgn0015777.1.mrna1;Target=FBgn0015777.1 152 292 +
ChrX	stalkie_big_nohaplotig	exon	58365002	58365152	100	-	.	Parent=FBgn0015777.1.mrna1;Target=FBgn0015777.1 1 151 +
ChrX	stalkie_big_nohaplotig	CDS	58347321	58347421	.	-	2	Parent=FBgn0015777.1.mrna1;Target=FBgn0015777.1 875 975 +
ChrX	stalkie_big_nohaplotig	CDS	58347489	58347657	.	-	0	Parent=FBgn0015777.1.mrna1;Target=FBgn0015777.1 706 874 +
ChrX	stalkie_big_nohaplotig	CDS	58347735	58348027	.	-	2	Parent=FBgn0015777.1.mrna1;Target=FBgn0015777.1 413 705 +
ChrX	stalkie_big_nohaplotig	CDS	58353239	58353358	.	-	2	Parent=FBgn0015777.1.mrna1;Target=FBgn0015777.1 293 412 +
ChrX	stalkie_big_nohaplotig	CDS	58353430	58353570	.	-	2	Parent=FBgn0015777.1.mrna1;Target=FBgn0015777.1 152 292 +
ChrX	stalkie_big_nohaplotig	CDS	58365002	58365152	.	-	0	Parent=FBgn0015777.1.mrna1;Target=FBgn0015777.1 1 151 +
ChrX	gffcl	locus	58365393	58365683	.	-	.	ID=RLOC_00003352;geneIDs=comp1055683_c0_seq1.path1;transcripts=comp1055683_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58365393	58365683	.	-	.	ID=comp1055683_c0_seq1.mrna1;geneID=comp1055683_c0_seq1.path1;Name=comp1055683_c0_seq1;Dir=indeterminatecoverage=96.7;identity=99.7;matches=290;mismatches=1;indels=0;unknowns=0;Target=comp1055683_c0_seq1 301 11 .;CDS_Target=comp1055683_c0_seq1 161 78 .;locus=RLOC_00003352
ChrX	stalkie_big_nohaplotig	exon	58365393	58365683	99	-	.	Parent=comp1055683_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	58365533	58365616	.	-	0	Parent=comp1055683_c0_seq1.mrna1
ChrX	gffcl	locus	58376500	58377794	.	+	.	ID=RLOC_00003353;geneIDs=FBgn0032768.3.path1;transcripts=FBgn0032768.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58376500	58377794	.	+	.	ID=FBgn0032768.3.mrna1;geneID=FBgn0032768.3.path1;Name=FBgn0032768.3;Dir=sensecoverage=100.0;identity=100.0;matches=1029;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003353
ChrX	stalkie_big_nohaplotig	exon	58376500	58376642	100	+	.	Parent=FBgn0032768.3.mrna1;Target=FBgn0032768.3 1 143 +
ChrX	stalkie_big_nohaplotig	exon	58376776	58377230	100	+	.	Parent=FBgn0032768.3.mrna1;Target=FBgn0032768.3 144 598 +
ChrX	stalkie_big_nohaplotig	exon	58377293	58377580	100	+	.	Parent=FBgn0032768.3.mrna1;Target=FBgn0032768.3 599 886 +
ChrX	stalkie_big_nohaplotig	exon	58377652	58377794	100	+	.	Parent=FBgn0032768.3.mrna1;Target=FBgn0032768.3 887 1029 +
ChrX	stalkie_big_nohaplotig	CDS	58376500	58376642	.	+	0	Parent=FBgn0032768.3.mrna1;Target=FBgn0032768.3 1 143 +
ChrX	stalkie_big_nohaplotig	CDS	58376776	58377230	.	+	1	Parent=FBgn0032768.3.mrna1;Target=FBgn0032768.3 144 598 +
ChrX	stalkie_big_nohaplotig	CDS	58377293	58377580	.	+	2	Parent=FBgn0032768.3.mrna1;Target=FBgn0032768.3 599 886 +
ChrX	stalkie_big_nohaplotig	CDS	58377652	58377794	.	+	2	Parent=FBgn0032768.3.mrna1;Target=FBgn0032768.3 887 1029 +
ChrX	gffcl	locus	58384863	60332934	.	-	.	ID=RLOC_00003354;geneIDs=comp154503_c1_seq1.path1;transcripts=comp154503_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58384863	60332934	.	-	.	ID=comp154503_c1_seq1.mrna1;geneID=comp154503_c1_seq1.path1;Name=comp154503_c1_seq1;Dir=indeterminatecoverage=33.4;identity=96.9;matches=401;mismatches=0;indels=13;unknowns=0;Target=comp154503_c1_seq1 486 382 .;locus=RLOC_00003354
ChrX	stalkie_big_nohaplotig	exon	58384863	58384875	50	-	.	Parent=comp154503_c1_seq1.mrna1;Target=comp154503_c1_seq1 797 772 .
ChrX	stalkie_big_nohaplotig	exon	58385805	58385813	100	-	.	Parent=comp154503_c1_seq1.mrna1;Target=comp154503_c1_seq1 771 763 .
ChrX	stalkie_big_nohaplotig	exon	58390009	58390016	100	-	.	Parent=comp154503_c1_seq1.mrna1;Target=comp154503_c1_seq1 762 755 .
ChrX	stalkie_big_nohaplotig	exon	58399476	58399479	100	-	.	Parent=comp154503_c1_seq1.mrna1;Target=comp154503_c1_seq1 754 751 .
ChrX	stalkie_big_nohaplotig	exon	58400918	58400922	100	-	.	Parent=comp154503_c1_seq1.mrna1;Target=comp154503_c1_seq1 750 746 .
ChrX	stalkie_big_nohaplotig	exon	58403033	58403038	100	-	.	Parent=comp154503_c1_seq1.mrna1;Target=comp154503_c1_seq1 745 740 .
ChrX	stalkie_big_nohaplotig	exon	58410625	58410626	100	-	.	Parent=comp154503_c1_seq1.mrna1;Target=comp154503_c1_seq1 739 738 .
ChrX	stalkie_big_nohaplotig	exon	60332581	60332934	100	-	.	Parent=comp154503_c1_seq1.mrna1;Target=comp154503_c1_seq1 735 382 .
ChrX	stalkie_big_nohaplotig	CDS	60332830	60332934	.	-	0	Parent=comp154503_c1_seq1.mrna1
ChrX	gffcl	locus	58396081	58397232	.	-	.	ID=RLOC_00003355;geneIDs=comp138644_c0_seq1.path1;transcripts=comp138644_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58396081	58397232	.	-	.	ID=comp138644_c0_seq1.mrna1;geneID=comp138644_c0_seq1.path1;Name=comp138644_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.0;matches=1064;mismatches=73;indels=19;unknowns=0;Target=comp138644_c0_seq1 1141 1 .;CDS_Target=comp138644_c0_seq1 505 437 .;locus=RLOC_00003355
ChrX	stalkie_big_nohaplotig	exon	58396081	58397232	92	-	.	Parent=comp138644_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	58396716	58396781	.	-	0	Parent=comp138644_c0_seq1.mrna1
ChrX	gffcl	locus	58405490	58406346	.	.	.	ID=RLOC_00003356;geneIDs=comp130526_c0_seq1.path1,comp158002_c0_seq1.path1;transcripts=comp130526_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58405490	58406202	.	-	.	ID=comp130526_c0_seq1.mrna1;geneID=comp130526_c0_seq1.path1;Name=comp130526_c0_seq1;Dir=indeterminatecoverage=98.1;identity=99.9;matches=712;mismatches=1;indels=0;unknowns=0;Target=comp130526_c0_seq1 727 15 .;CDS_Target=comp130526_c0_seq1 123 16 .;locus=RLOC_00003356
ChrX	stalkie_big_nohaplotig	exon	58405490	58406202	99	-	.	Parent=comp130526_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	58406094	58406201	.	-	0	Parent=comp130526_c0_seq1.mrna1
ChrX	gffcl	locus	58408208	58490192	.	-	.	ID=RLOC_00003357;geneIDs=FBgn0051619.1.path1;transcripts=FBgn0051619.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58408208	58490192	.	-	.	ID=FBgn0051619.1.mrna1;geneID=FBgn0051619.1.path1;Name=FBgn0051619.1;Dir=sensecoverage=100.0;identity=100.0;matches=3446;mismatches=0;indels=1;unknowns=0;Target=FBgn0051619.1 3 26 +;locus=RLOC_00003357
ChrX	stalkie_big_nohaplotig	exon	58408208	58408329	100	-	.	Parent=FBgn0051619.1.mrna1;Target=FBgn0051619.1 3326 3447 +
ChrX	stalkie_big_nohaplotig	exon	58408484	58408634	100	-	.	Parent=FBgn0051619.1.mrna1;Target=FBgn0051619.1 3175 3325 +
ChrX	stalkie_big_nohaplotig	exon	58408717	58409085	100	-	.	Parent=FBgn0051619.1.mrna1;Target=FBgn0051619.1 2806 3174 +
ChrX	stalkie_big_nohaplotig	exon	58412558	58412953	100	-	.	Parent=FBgn0051619.1.mrna1;Target=FBgn0051619.1 2410 2805 +
ChrX	stalkie_big_nohaplotig	exon	58450680	58450808	100	-	.	Parent=FBgn0051619.1.mrna1;Target=FBgn0051619.1 2281 2409 +
ChrX	stalkie_big_nohaplotig	exon	58454277	58454382	100	-	.	Parent=FBgn0051619.1.mrna1;Target=FBgn0051619.1 2175 2280 +
ChrX	stalkie_big_nohaplotig	exon	58457228	58457303	100	-	.	Parent=FBgn0051619.1.mrna1;Target=FBgn0051619.1 2099 2174 +
ChrX	stalkie_big_nohaplotig	exon	58462619	58463787	100	-	.	Parent=FBgn0051619.1.mrna1;Target=FBgn0051619.1 930 2098 +
ChrX	stalkie_big_nohaplotig	exon	58469827	58470104	100	-	.	Parent=FBgn0051619.1.mrna1;Target=FBgn0051619.1 652 929 +
ChrX	stalkie_big_nohaplotig	exon	58470203	58470397	100	-	.	Parent=FBgn0051619.1.mrna1;Target=FBgn0051619.1 457 651 +
ChrX	stalkie_big_nohaplotig	exon	58473553	58473648	100	-	.	Parent=FBgn0051619.1.mrna1;Target=FBgn0051619.1 361 456 +
ChrX	stalkie_big_nohaplotig	exon	58474064	58474166	100	-	.	Parent=FBgn0051619.1.mrna1;Target=FBgn0051619.1 258 360 +
ChrX	stalkie_big_nohaplotig	exon	58477665	58477794	100	-	.	Parent=FBgn0051619.1.mrna1;Target=FBgn0051619.1 128 257 +
ChrX	stalkie_big_nohaplotig	exon	58490067	58490192	99	-	.	Parent=FBgn0051619.1.mrna1;Target=FBgn0051619.1 1 127 +
ChrX	stalkie_big_nohaplotig	CDS	58490168	58490190	.	-	0	Parent=FBgn0051619.1.mrna1
ChrX	gffcl	locus	58528625	58529505	.	+	.	ID=RLOC_00003358;geneIDs=comp149410_c0_seq1.path1;transcripts=comp149410_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58528625	58529505	.	+	.	ID=comp149410_c0_seq1.mrna1;geneID=comp149410_c0_seq1.path1;Name=comp149410_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.9;matches=810;mismatches=1;indels=0;unknowns=0;Target=comp149410_c0_seq1 375 214 .;locus=RLOC_00003358
ChrX	stalkie_big_nohaplotig	exon	58528625	58528694	100	+	.	Parent=comp149410_c0_seq1.mrna1;Target=comp149410_c0_seq1 70 1 .
ChrX	stalkie_big_nohaplotig	exon	58528765	58529505	99	+	.	Parent=comp149410_c0_seq1.mrna1;Target=comp149410_c0_seq1 818 78 .
ChrX	stalkie_big_nohaplotig	CDS	58528901	58529062	.	+	0	Parent=comp149410_c0_seq1.mrna1
ChrX	gffcl	locus	58542165	58542918	.	-	.	ID=RLOC_00003359;geneIDs=ORF3098.path1;transcripts=ORF3098.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58542165	58542918	.	-	.	ID=ORF3098.mrna1;geneID=ORF3098.path1;Name=ORF3098;Dir=indeterminatecoverage=98.2;identity=99.3;matches=749;mismatches=5;indels=0;unknowns=0;Target=ORF3098 768 15 .;CDS_Target=ORF3098 768 127 .;locus=RLOC_00003359
ChrX	stalkie_big_nohaplotig	exon	58542165	58542918	99	-	.	Parent=ORF3098.mrna1
ChrX	stalkie_big_nohaplotig	CDS	58542165	58542806	.	-	0	Parent=ORF3098.mrna1
ChrX	gffcl	locus	58683918	58692829	.	+	.	ID=RLOC_00003360;geneIDs=comp156191_c3_seq1.path1;transcripts=comp156191_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58683918	58692829	.	+	.	ID=comp156191_c3_seq1.mrna1;geneID=comp156191_c3_seq1.path1;Name=comp156191_c3_seq1;Dir=antisensecoverage=100.0;identity=98.4;matches=667;mismatches=8;indels=3;unknowns=0;locus=RLOC_00003360
ChrX	stalkie_big_nohaplotig	exon	58683918	58683941	100	+	.	Parent=comp156191_c3_seq1.mrna1;Target=comp156191_c3_seq1 780 803 -
ChrX	stalkie_big_nohaplotig	exon	58683946	58684106	94	+	.	Parent=comp156191_c3_seq1.mrna1;Target=comp156191_c3_seq1 492 653 -
ChrX	stalkie_big_nohaplotig	exon	58692279	58692542	100	+	.	Parent=comp156191_c3_seq1.mrna1;Target=comp156191_c3_seq1 228 491 -
ChrX	stalkie_big_nohaplotig	exon	58692603	58692829	99	+	.	Parent=comp156191_c3_seq1.mrna1;Target=comp156191_c3_seq1 1 227 -
ChrX	stalkie_big_nohaplotig	CDS	58692513	58692542	.	+	0	Parent=comp156191_c3_seq1.mrna1;Target=comp156191_c3_seq1 228 257 .
ChrX	stalkie_big_nohaplotig	CDS	58692603	58692764	.	+	0	Parent=comp156191_c3_seq1.mrna1;Target=comp156191_c3_seq1 66 227 .
ChrX	gffcl	locus	58735150	58737840	.	-	.	ID=RLOC_00003362;geneIDs=comp151496_c0_seq1.path1;transcripts=comp151496_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58735150	58737840	.	-	.	ID=comp151496_c0_seq1.mrna1;geneID=comp151496_c0_seq1.path1;Name=comp151496_c0_seq1;Dir=sensecoverage=99.7;identity=99.0;matches=619;mismatches=6;indels=0;unknowns=0;locus=RLOC_00003362
ChrX	stalkie_big_nohaplotig	exon	58735150	58735459	99	-	.	Parent=comp151496_c0_seq1.mrna1;Target=comp151496_c0_seq1 316 625 +
ChrX	stalkie_big_nohaplotig	exon	58735517	58735589	98	-	.	Parent=comp151496_c0_seq1.mrna1;Target=comp151496_c0_seq1 243 315 +
ChrX	stalkie_big_nohaplotig	exon	58735644	58735746	97	-	.	Parent=comp151496_c0_seq1.mrna1;Target=comp151496_c0_seq1 140 242 +
ChrX	stalkie_big_nohaplotig	exon	58737702	58737840	99	-	.	Parent=comp151496_c0_seq1.mrna1;Target=comp151496_c0_seq1 1 139 +
ChrX	stalkie_big_nohaplotig	CDS	58735300	58735459	.	-	1	Parent=comp151496_c0_seq1.mrna1;Target=comp151496_c0_seq1 316 475 +
ChrX	stalkie_big_nohaplotig	CDS	58735517	58735551	.	-	0	Parent=comp151496_c0_seq1.mrna1;Target=comp151496_c0_seq1 281 315 +
ChrX	gffcl	locus	58759339	58759690	.	+	.	ID=RLOC_00003363;geneIDs=comp155996_c0_seq1.path1;transcripts=comp155996_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58759339	58759690	.	+	.	ID=comp155996_c0_seq1.mrna1;geneID=comp155996_c0_seq1.path1;Name=comp155996_c0_seq1;Dir=indeterminatecoverage=45.7;identity=100.0;matches=352;mismatches=0;indels=0;unknowns=0;Target=comp155996_c0_seq1 352 1 .;CDS_Target=comp155996_c0_seq1 313 221 .;locus=RLOC_00003363
ChrX	stalkie_big_nohaplotig	exon	58759339	58759690	100	+	.	Parent=comp155996_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	58759559	58759651	.	+	0	Parent=comp155996_c0_seq1.mrna1
ChrX	gffcl	locus	58761007	58761216	.	-	.	ID=RLOC_00003364;geneIDs=comp116435_c0_seq1.path1;transcripts=comp116435_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58761007	58761216	.	-	.	ID=comp116435_c0_seq1.mrna1;geneID=comp116435_c0_seq1.path1;Name=comp116435_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=210;mismatches=0;indels=0;unknowns=0;Target=comp116435_c0_seq1 210 1 .;CDS_Target=comp116435_c0_seq1 107 3 .;locus=RLOC_00003364
ChrX	stalkie_big_nohaplotig	exon	58761007	58761216	100	-	.	Parent=comp116435_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	58761110	58761214	.	-	0	Parent=comp116435_c0_seq1.mrna1
ChrX	gffcl	locus	58761883	58762224	.	-	.	ID=RLOC_00003365;geneIDs=comp135289_c0_seq1.path1;transcripts=comp135289_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58761883	58762224	.	-	.	ID=comp135289_c0_seq1.mrna1;geneID=comp135289_c0_seq1.path1;Name=comp135289_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=275;mismatches=0;indels=0;unknowns=0;Target=comp135289_c0_seq1 220 273 .;locus=RLOC_00003365
ChrX	stalkie_big_nohaplotig	exon	58761883	58761905	100	-	.	Parent=comp135289_c0_seq1.mrna1;Target=comp135289_c0_seq1 1 23 -
ChrX	stalkie_big_nohaplotig	exon	58761973	58762224	100	-	.	Parent=comp135289_c0_seq1.mrna1;Target=comp135289_c0_seq1 24 275 -
ChrX	stalkie_big_nohaplotig	CDS	58762169	58762222	.	-	0	Parent=comp135289_c0_seq1.mrna1
ChrX	gffcl	locus	58781759	58782116	.	-	.	ID=RLOC_00003366;geneIDs=comp106422_c0_seq1.path1;transcripts=comp106422_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58781759	58782116	.	-	.	ID=comp106422_c0_seq1.mrna1;geneID=comp106422_c0_seq1.path1;Name=comp106422_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=357;mismatches=1;indels=0;unknowns=0;Target=comp106422_c0_seq1 358 1 .;CDS_Target=comp106422_c0_seq1 84 1 .;locus=RLOC_00003366
ChrX	stalkie_big_nohaplotig	exon	58781759	58782116	99	-	.	Parent=comp106422_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	58782033	58782116	.	-	0	Parent=comp106422_c0_seq1.mrna1
ChrX	gffcl	locus	58786654	58826933	.	-	.	ID=RLOC_00003367;geneIDs=FBgn0041789.path1;transcripts=FBgn0041789.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58786654	58826933	.	-	.	ID=FBgn0041789.mrna1;geneID=FBgn0041789.path1;Name=FBgn0041789;Dir=sensecoverage=97.4;identity=100.0;matches=882;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003367
ChrX	stalkie_big_nohaplotig	exon	58786654	58786787	100	-	.	Parent=FBgn0041789.mrna1;Target=FBgn0041789 749 882 +
ChrX	stalkie_big_nohaplotig	exon	58786852	58786943	100	-	.	Parent=FBgn0041789.mrna1;Target=FBgn0041789 657 748 +
ChrX	stalkie_big_nohaplotig	exon	58790770	58790911	100	-	.	Parent=FBgn0041789.mrna1;Target=FBgn0041789 515 656 +
ChrX	stalkie_big_nohaplotig	exon	58792015	58792273	100	-	.	Parent=FBgn0041789.mrna1;Target=FBgn0041789 256 514 +
ChrX	stalkie_big_nohaplotig	exon	58792337	58792491	100	-	.	Parent=FBgn0041789.mrna1;Target=FBgn0041789 101 255 +
ChrX	stalkie_big_nohaplotig	exon	58826834	58826933	100	-	.	Parent=FBgn0041789.mrna1;Target=FBgn0041789 1 100 +
ChrX	stalkie_big_nohaplotig	CDS	58786654	58786787	.	-	2	Parent=FBgn0041789.mrna1;Target=FBgn0041789 749 882 +
ChrX	stalkie_big_nohaplotig	CDS	58786852	58786943	.	-	1	Parent=FBgn0041789.mrna1;Target=FBgn0041789 657 748 +
ChrX	stalkie_big_nohaplotig	CDS	58790770	58790911	.	-	2	Parent=FBgn0041789.mrna1;Target=FBgn0041789 515 656 +
ChrX	stalkie_big_nohaplotig	CDS	58792015	58792273	.	-	0	Parent=FBgn0041789.mrna1;Target=FBgn0041789 256 514 +
ChrX	stalkie_big_nohaplotig	CDS	58792337	58792491	.	-	2	Parent=FBgn0041789.mrna1;Target=FBgn0041789 101 255 +
ChrX	stalkie_big_nohaplotig	CDS	58826834	58826933	.	-	0	Parent=FBgn0041789.mrna1;Target=FBgn0041789 1 100 +
ChrX	gffcl	locus	58850620	58851426	.	+	.	ID=RLOC_00003368;geneIDs=FBgn0016697.3.path2;transcripts=FBgn0016697.3.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	58850620	58851426	.	+	.	ID=FBgn0016697.3.mrna2;geneID=FBgn0016697.3.path2;Name=FBgn0016697.3;Dir=indeterminatecoverage=87.7;identity=97.4;matches=738;mismatches=20;indels=0;unknowns=0;locus=RLOC_00003368
ChrX	stalkie_big_nohaplotig	exon	58850620	58850760	93	+	.	Parent=FBgn0016697.3.mrna2;Target=FBgn0016697.3 247 107 .
ChrX	stalkie_big_nohaplotig	exon	58850810	58851426	98	+	.	Parent=FBgn0016697.3.mrna2;Target=FBgn0016697.3 864 248 .
ChrX	stalkie_big_nohaplotig	CDS	58850620	58850760	.	+	1	Parent=FBgn0016697.3.mrna2;Target=FBgn0016697.3 247 107 .
ChrX	stalkie_big_nohaplotig	CDS	58850810	58851426	.	+	1	Parent=FBgn0016697.3.mrna2;Target=FBgn0016697.3 864 248 .
ChrX	gffcl	locus	58855726	58856261	.	+	.	ID=RLOC_00003369;geneIDs=comp142159_c0_seq1.path1;transcripts=comp142159_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58855726	58856261	.	+	.	ID=comp142159_c0_seq1.mrna1;geneID=comp142159_c0_seq1.path1;Name=comp142159_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=531;mismatches=2;indels=11;unknowns=0;Target=comp142159_c0_seq1 541 1 .;CDS_Target=comp142159_c0_seq1 54 1 .;locus=RLOC_00003369
ChrX	stalkie_big_nohaplotig	exon	58855726	58856261	97	+	.	Parent=comp142159_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	58855726	58855775	.	+	0	Parent=comp142159_c0_seq1.mrna1
ChrX	gffcl	locus	58863779	58867126	.	-	.	ID=RLOC_00003370;geneIDs=FBgn0032943.2.path1;transcripts=FBgn0032943.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58863779	58867126	.	-	.	ID=FBgn0032943.2.mrna1;geneID=FBgn0032943.2.path1;Name=FBgn0032943.2;Dir=sensecoverage=100.0;identity=99.9;matches=722;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003370
ChrX	stalkie_big_nohaplotig	exon	58863779	58863841	100	-	.	Parent=FBgn0032943.2.mrna1;Target=FBgn0032943.2 661 723 +
ChrX	stalkie_big_nohaplotig	exon	58863907	58864125	100	-	.	Parent=FBgn0032943.2.mrna1;Target=FBgn0032943.2 442 660 +
ChrX	stalkie_big_nohaplotig	exon	58866623	58866982	99	-	.	Parent=FBgn0032943.2.mrna1;Target=FBgn0032943.2 82 441 +
ChrX	stalkie_big_nohaplotig	exon	58867046	58867126	100	-	.	Parent=FBgn0032943.2.mrna1;Target=FBgn0032943.2 1 81 +
ChrX	stalkie_big_nohaplotig	CDS	58863779	58863841	.	-	0	Parent=FBgn0032943.2.mrna1;Target=FBgn0032943.2 661 723 +
ChrX	stalkie_big_nohaplotig	CDS	58863907	58864125	.	-	0	Parent=FBgn0032943.2.mrna1;Target=FBgn0032943.2 442 660 +
ChrX	stalkie_big_nohaplotig	CDS	58866623	58866982	.	-	0	Parent=FBgn0032943.2.mrna1;Target=FBgn0032943.2 82 441 +
ChrX	stalkie_big_nohaplotig	CDS	58867046	58867126	.	-	0	Parent=FBgn0032943.2.mrna1;Target=FBgn0032943.2 1 81 +
ChrX	gffcl	locus	58879285	58881005	.	-	.	ID=RLOC_00003371;geneIDs=FBgn0032943.1.path1;transcripts=FBgn0032943.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58879285	58881005	.	-	.	ID=FBgn0032943.1.mrna1;geneID=FBgn0032943.1.path1;Name=FBgn0032943.1;Dir=sensecoverage=100.0;identity=99.7;matches=694;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003371
ChrX	stalkie_big_nohaplotig	exon	58879285	58879323	100	-	.	Parent=FBgn0032943.1.mrna1;Target=FBgn0032943.1 658 696 +
ChrX	stalkie_big_nohaplotig	exon	58879392	58879610	99	-	.	Parent=FBgn0032943.1.mrna1;Target=FBgn0032943.1 439 657 +
ChrX	stalkie_big_nohaplotig	exon	58880510	58880869	99	-	.	Parent=FBgn0032943.1.mrna1;Target=FBgn0032943.1 79 438 +
ChrX	stalkie_big_nohaplotig	exon	58880928	58881005	100	-	.	Parent=FBgn0032943.1.mrna1;Target=FBgn0032943.1 1 78 +
ChrX	stalkie_big_nohaplotig	CDS	58879285	58879323	.	-	0	Parent=FBgn0032943.1.mrna1;Target=FBgn0032943.1 658 696 +
ChrX	stalkie_big_nohaplotig	CDS	58879392	58879610	.	-	0	Parent=FBgn0032943.1.mrna1;Target=FBgn0032943.1 439 657 +
ChrX	stalkie_big_nohaplotig	CDS	58880510	58880869	.	-	0	Parent=FBgn0032943.1.mrna1;Target=FBgn0032943.1 79 438 +
ChrX	stalkie_big_nohaplotig	CDS	58880928	58881005	.	-	0	Parent=FBgn0032943.1.mrna1;Target=FBgn0032943.1 1 78 +
ChrX	gffcl	locus	58888493	58892602	.	+	.	ID=RLOC_00003372;geneIDs=comp142731_c0_seq1.path1;transcripts=comp142731_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58888493	58892602	.	+	.	ID=comp142731_c0_seq1.mrna1;geneID=comp142731_c0_seq1.path1;Name=comp142731_c0_seq1;Dir=sensecoverage=99.6;identity=98.5;matches=793;mismatches=6;indels=6;unknowns=0;Target=comp142731_c0_seq1 166 681 +;locus=RLOC_00003372
ChrX	stalkie_big_nohaplotig	exon	58888493	58888646	99	+	.	Parent=comp142731_c0_seq1.mrna1;Target=comp142731_c0_seq1 2 155 +
ChrX	stalkie_big_nohaplotig	exon	58891958	58892602	98	+	.	Parent=comp142731_c0_seq1.mrna1;Target=comp142731_c0_seq1 156 806 +
ChrX	stalkie_big_nohaplotig	CDS	58891968	58892477	.	+	0	Parent=comp142731_c0_seq1.mrna1
ChrX	gffcl	locus	58897685	58898622	.	+	.	ID=RLOC_00003373;geneIDs=comp149658_c0_seq1.path1;transcripts=comp149658_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58897685	58898622	.	+	.	ID=comp149658_c0_seq1.mrna1;geneID=comp149658_c0_seq1.path1;Name=comp149658_c0_seq1;Dir=antisensecoverage=99.7;identity=99.6;matches=777;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003373
ChrX	stalkie_big_nohaplotig	exon	58897685	58897823	100	+	.	Parent=comp149658_c0_seq1.mrna1;Target=comp149658_c0_seq1 643 781 -
ChrX	stalkie_big_nohaplotig	exon	58897982	58898622	99	+	.	Parent=comp149658_c0_seq1.mrna1;Target=comp149658_c0_seq1 2 642 -
ChrX	stalkie_big_nohaplotig	CDS	58897797	58897823	.	+	0	Parent=comp149658_c0_seq1.mrna1;Target=comp149658_c0_seq1 643 669 .
ChrX	stalkie_big_nohaplotig	CDS	58897982	58898506	.	+	0	Parent=comp149658_c0_seq1.mrna1;Target=comp149658_c0_seq1 118 642 .
ChrX	gffcl	locus	58987072	58987984	.	-	.	ID=RLOC_00003374;geneIDs=comp143519_c0_seq1.path1;transcripts=comp143519_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58987072	58987984	.	-	.	ID=comp143519_c0_seq1.mrna1;geneID=comp143519_c0_seq1.path1;Name=comp143519_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=913;mismatches=0;indels=1;unknowns=0;Target=comp143519_c0_seq1 914 1 .;CDS_Target=comp143519_c0_seq1 597 493 .;locus=RLOC_00003374
ChrX	stalkie_big_nohaplotig	exon	58987072	58987984	99	-	.	Parent=comp143519_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	58987389	58987493	.	-	0	Parent=comp143519_c0_seq1.mrna1
ChrX	gffcl	locus	58988133	58988951	.	-	.	ID=RLOC_00003375;geneIDs=ORF2705.path1;transcripts=ORF2705.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	58988133	58988951	.	-	.	ID=ORF2705.mrna1;geneID=ORF2705.path1;Name=ORF2705;Dir=indeterminatecoverage=100.0;identity=99.9;matches=818;mismatches=1;indels=0;unknowns=0;Target=ORF2705 819 1 .;locus=RLOC_00003375
ChrX	stalkie_big_nohaplotig	exon	58988133	58988951	99	-	.	Parent=ORF2705.mrna1
ChrX	stalkie_big_nohaplotig	CDS	58988133	58988951	.	-	0	Parent=ORF2705.mrna1
ChrX	gffcl	locus	59003377	59022277	.	+	.	ID=RLOC_00003376;geneIDs=comp151643_c0_seq1.path1;transcripts=comp151643_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59003377	59022277	.	+	.	ID=comp151643_c0_seq1.mrna1;geneID=comp151643_c0_seq1.path1;Name=comp151643_c0_seq1;Dir=sensecoverage=99.4;identity=99.5;matches=1070;mismatches=5;indels=0;unknowns=0;locus=RLOC_00003376
ChrX	stalkie_big_nohaplotig	exon	59003377	59003492	97	+	.	Parent=comp151643_c0_seq1.mrna1;Target=comp151643_c0_seq1 8 123 +
ChrX	stalkie_big_nohaplotig	exon	59021241	59021923	99	+	.	Parent=comp151643_c0_seq1.mrna1;Target=comp151643_c0_seq1 124 806 +
ChrX	stalkie_big_nohaplotig	exon	59022002	59022277	99	+	.	Parent=comp151643_c0_seq1.mrna1;Target=comp151643_c0_seq1 807 1082 +
ChrX	stalkie_big_nohaplotig	CDS	59003457	59003492	.	+	0	Parent=comp151643_c0_seq1.mrna1;Target=comp151643_c0_seq1 88 123 +
ChrX	stalkie_big_nohaplotig	CDS	59021241	59021923	.	+	0	Parent=comp151643_c0_seq1.mrna1;Target=comp151643_c0_seq1 124 806 +
ChrX	stalkie_big_nohaplotig	CDS	59022002	59022008	.	+	1	Parent=comp151643_c0_seq1.mrna1;Target=comp151643_c0_seq1 807 813 +
ChrX	gffcl	locus	59044042	59044953	.	+	.	ID=RLOC_00003377;geneIDs=ORF3004.path1;transcripts=ORF3004.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59044042	59044953	.	+	.	ID=ORF3004.mrna1;geneID=ORF3004.path1;Name=ORF3004;Dir=sensecoverage=100.0;identity=99.6;matches=777;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003377
ChrX	stalkie_big_nohaplotig	exon	59044042	59044146	100	+	.	Parent=ORF3004.mrna1;Target=ORF3004 1 105 +
ChrX	stalkie_big_nohaplotig	exon	59044209	59044265	100	+	.	Parent=ORF3004.mrna1;Target=ORF3004 106 162 +
ChrX	stalkie_big_nohaplotig	exon	59044336	59044953	99	+	.	Parent=ORF3004.mrna1;Target=ORF3004 163 780 +
ChrX	stalkie_big_nohaplotig	CDS	59044042	59044146	.	+	0	Parent=ORF3004.mrna1;Target=ORF3004 1 105 +
ChrX	stalkie_big_nohaplotig	CDS	59044209	59044265	.	+	0	Parent=ORF3004.mrna1;Target=ORF3004 106 162 +
ChrX	stalkie_big_nohaplotig	CDS	59044336	59044953	.	+	0	Parent=ORF3004.mrna1;Target=ORF3004 163 780 +
ChrX	gffcl	locus	59082727	59083741	.	-	.	ID=RLOC_00003378;geneIDs=comp98219_c0_seq1.path1;transcripts=comp98219_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59082727	59083741	.	-	.	ID=comp98219_c0_seq1.mrna1;geneID=comp98219_c0_seq1.path1;Name=comp98219_c0_seq1;Dir=sensecoverage=99.6;identity=99.8;matches=521;mismatches=1;indels=0;unknowns=0;Target=comp98219_c0_seq1 104 442 +;locus=RLOC_00003378
ChrX	stalkie_big_nohaplotig	exon	59082727	59083156	99	-	.	Parent=comp98219_c0_seq1.mrna1;Target=comp98219_c0_seq1 94 523 +
ChrX	stalkie_big_nohaplotig	exon	59083650	59083741	100	-	.	Parent=comp98219_c0_seq1.mrna1;Target=comp98219_c0_seq1 2 93 +
ChrX	stalkie_big_nohaplotig	CDS	59082808	59083146	.	-	0	Parent=comp98219_c0_seq1.mrna1
ChrX	gffcl	locus	59084747	59084974	.	+	.	ID=RLOC_00003379;geneIDs=comp5382028_c0_seq1.path1;transcripts=comp5382028_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59084747	59084974	.	+	.	ID=comp5382028_c0_seq1.mrna1;geneID=comp5382028_c0_seq1.path1;Name=comp5382028_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.2;matches=217;mismatches=10;indels=1;unknowns=0;Target=comp5382028_c0_seq1 227 1 .;CDS_Target=comp5382028_c0_seq1 197 135 .;locus=RLOC_00003379
ChrX	stalkie_big_nohaplotig	exon	59084747	59084974	95	+	.	Parent=comp5382028_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59084882	59084944	.	+	0	Parent=comp5382028_c0_seq1.mrna1
ChrX	gffcl	locus	59090624	59091187	.	-	.	ID=RLOC_00003380;geneIDs=FBgn0000370.1.path1;transcripts=FBgn0000370.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59090624	59091187	.	-	.	ID=FBgn0000370.1.mrna1;geneID=FBgn0000370.1.path1;Name=FBgn0000370.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=564;mismatches=0;indels=0;unknowns=0;Target=FBgn0000370.1 564 1 .;locus=RLOC_00003380
ChrX	stalkie_big_nohaplotig	exon	59090624	59091187	100	-	.	Parent=FBgn0000370.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59090624	59091187	.	-	0	Parent=FBgn0000370.1.mrna1
ChrX	gffcl	locus	59095184	59378447	.	-	.	ID=RLOC_00003381;geneIDs=comp161537_c1_seq1.path1;transcripts=comp161537_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59095184	59378447	.	-	.	ID=comp161537_c1_seq1.mrna1;geneID=comp161537_c1_seq1.path1;Name=comp161537_c1_seq1;Dir=indeterminatecoverage=70.5;identity=91.9;matches=1697;mismatches=70;indels=79;unknowns=0;Target=comp161537_c1_seq1 991 884 .;locus=RLOC_00003381
ChrX	stalkie_big_nohaplotig	exon	59095184	59095190	100	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 2042 2036 .
ChrX	stalkie_big_nohaplotig	exon	59098096	59098100	100	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 2035 2031 .
ChrX	stalkie_big_nohaplotig	exon	59102382	59102384	100	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 2030 2028 .
ChrX	stalkie_big_nohaplotig	exon	59104048	59104054	100	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 2027 2021 .
ChrX	stalkie_big_nohaplotig	exon	59105329	59105333	100	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 2020 2016 .
ChrX	stalkie_big_nohaplotig	exon	59111167	59111173	100	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 2015 2009 .
ChrX	stalkie_big_nohaplotig	exon	59113388	59113393	100	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 2008 2003 .
ChrX	stalkie_big_nohaplotig	exon	59119641	59119642	100	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 2002 2001 .
ChrX	stalkie_big_nohaplotig	exon	59125363	59125366	100	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 2000 1997 .
ChrX	stalkie_big_nohaplotig	exon	59129283	59129291	100	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1996 1988 .
ChrX	stalkie_big_nohaplotig	exon	59139385	59139437	50	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1987 1933 .
ChrX	stalkie_big_nohaplotig	exon	59140765	59140776	91	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1932 1921 .
ChrX	stalkie_big_nohaplotig	exon	59142009	59142017	100	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1920 1912 .
ChrX	stalkie_big_nohaplotig	exon	59150002	59150039	52	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1911 1872 .
ChrX	stalkie_big_nohaplotig	exon	59159966	59159969	100	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1871 1868 .
ChrX	stalkie_big_nohaplotig	exon	59165862	59165895	38	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1867 1855 .
ChrX	stalkie_big_nohaplotig	exon	59173074	59173076	100	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1854 1852 .
ChrX	stalkie_big_nohaplotig	exon	59176857	59176863	100	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1851 1845 .
ChrX	stalkie_big_nohaplotig	exon	59179255	59179263	100	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1813 1805 .
ChrX	stalkie_big_nohaplotig	exon	59179388	59179428	58	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1797 1766 .
ChrX	stalkie_big_nohaplotig	exon	59185806	59185819	100	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1749 1736 .
ChrX	stalkie_big_nohaplotig	exon	59186476	59186487	46	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1735 1723 .
ChrX	stalkie_big_nohaplotig	exon	59193471	59193480	100	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1710 1701 .
ChrX	stalkie_big_nohaplotig	exon	59207763	59207780	50	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1700 1691 .
ChrX	stalkie_big_nohaplotig	exon	59211905	59211915	40	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1690 1664 .
ChrX	stalkie_big_nohaplotig	exon	59217039	59217051	92	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1663 1651 .
ChrX	stalkie_big_nohaplotig	exon	59243786	59243794	88	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1650 1642 .
ChrX	stalkie_big_nohaplotig	exon	59281286	59281294	100	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1637 1629 .
ChrX	stalkie_big_nohaplotig	exon	59284793	59284794	100	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1571 1570 .
ChrX	stalkie_big_nohaplotig	exon	59289069	59289072	100	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1569 1566 .
ChrX	stalkie_big_nohaplotig	exon	59294036	59294042	71	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1565 1559 .
ChrX	stalkie_big_nohaplotig	exon	59307424	59307432	100	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1558 1550 .
ChrX	stalkie_big_nohaplotig	exon	59316605	59316612	100	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1549 1542 .
ChrX	stalkie_big_nohaplotig	exon	59322470	59322474	80	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1541 1537 .
ChrX	stalkie_big_nohaplotig	exon	59323287	59323292	66	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1536 1532 .
ChrX	stalkie_big_nohaplotig	exon	59377041	59378447	98	-	.	Parent=comp161537_c1_seq1.mrna1;Target=comp161537_c1_seq1 1412 1 .
ChrX	stalkie_big_nohaplotig	CDS	59377457	59377564	.	-	0	Parent=comp161537_c1_seq1.mrna1
ChrX	gffcl	locus	59109662	59109851	.	-	.	ID=RLOC_00003382;geneIDs=comp158258_c1_seq1.path2;transcripts=comp158258_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	59109662	59109851	.	-	.	ID=comp158258_c1_seq1.mrna2;geneID=comp158258_c1_seq1.path2;Name=comp158258_c1_seq1;Dir=indeterminatecoverage=6.3;identity=100.0;matches=190;mismatches=0;indels=0;unknowns=0;Target=comp158258_c1_seq1 2998 2809 .;locus=RLOC_00003382
ChrX	stalkie_big_nohaplotig	exon	59109662	59109851	100	-	.	Parent=comp158258_c1_seq1.mrna2
ChrX	gffcl	locus	59157195	59204610	.	+	.	ID=RLOC_00003384;geneIDs=FBgn0032940.1.path1;transcripts=FBgn0032940.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59157195	59204610	.	+	.	ID=FBgn0032940.1.mrna1;geneID=FBgn0032940.1.path1;Name=FBgn0032940.1;Dir=sensecoverage=100.0;identity=99.4;matches=2285;mismatches=13;indels=0;unknowns=0;locus=RLOC_00003384
ChrX	stalkie_big_nohaplotig	exon	59157195	59157658	99	+	.	Parent=FBgn0032940.1.mrna1;Target=FBgn0032940.1 1 464 +
ChrX	stalkie_big_nohaplotig	exon	59167543	59167649	100	+	.	Parent=FBgn0032940.1.mrna1;Target=FBgn0032940.1 465 571 +
ChrX	stalkie_big_nohaplotig	exon	59173627	59173700	100	+	.	Parent=FBgn0032940.1.mrna1;Target=FBgn0032940.1 572 645 +
ChrX	stalkie_big_nohaplotig	exon	59186177	59186293	99	+	.	Parent=FBgn0032940.1.mrna1;Target=FBgn0032940.1 646 762 +
ChrX	stalkie_big_nohaplotig	exon	59202169	59202298	100	+	.	Parent=FBgn0032940.1.mrna1;Target=FBgn0032940.1 763 892 +
ChrX	stalkie_big_nohaplotig	exon	59202377	59202463	100	+	.	Parent=FBgn0032940.1.mrna1;Target=FBgn0032940.1 893 979 +
ChrX	stalkie_big_nohaplotig	exon	59202539	59202628	100	+	.	Parent=FBgn0032940.1.mrna1;Target=FBgn0032940.1 980 1069 +
ChrX	stalkie_big_nohaplotig	exon	59203312	59203717	98	+	.	Parent=FBgn0032940.1.mrna1;Target=FBgn0032940.1 1070 1475 +
ChrX	stalkie_big_nohaplotig	exon	59203788	59204610	99	+	.	Parent=FBgn0032940.1.mrna1;Target=FBgn0032940.1 1476 2298 +
ChrX	stalkie_big_nohaplotig	CDS	59157195	59157658	.	+	0	Parent=FBgn0032940.1.mrna1;Target=FBgn0032940.1 1 464 +
ChrX	stalkie_big_nohaplotig	CDS	59167543	59167649	.	+	1	Parent=FBgn0032940.1.mrna1;Target=FBgn0032940.1 465 571 +
ChrX	stalkie_big_nohaplotig	CDS	59173627	59173700	.	+	2	Parent=FBgn0032940.1.mrna1;Target=FBgn0032940.1 572 645 +
ChrX	stalkie_big_nohaplotig	CDS	59186177	59186293	.	+	0	Parent=FBgn0032940.1.mrna1;Target=FBgn0032940.1 646 762 +
ChrX	stalkie_big_nohaplotig	CDS	59202169	59202298	.	+	0	Parent=FBgn0032940.1.mrna1;Target=FBgn0032940.1 763 892 +
ChrX	stalkie_big_nohaplotig	CDS	59202377	59202463	.	+	2	Parent=FBgn0032940.1.mrna1;Target=FBgn0032940.1 893 979 +
ChrX	stalkie_big_nohaplotig	CDS	59202539	59202628	.	+	2	Parent=FBgn0032940.1.mrna1;Target=FBgn0032940.1 980 1069 +
ChrX	stalkie_big_nohaplotig	CDS	59203312	59203717	.	+	2	Parent=FBgn0032940.1.mrna1;Target=FBgn0032940.1 1070 1475 +
ChrX	stalkie_big_nohaplotig	CDS	59203788	59204610	.	+	1	Parent=FBgn0032940.1.mrna1;Target=FBgn0032940.1 1476 2298 +
ChrX	gffcl	locus	59205092	59211538	.	+	.	ID=RLOC_00003385;geneIDs=comp159004_c0_seq1.path2;transcripts=comp159004_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	59205092	59211538	.	+	.	ID=comp159004_c0_seq1.mrna2;geneID=comp159004_c0_seq1.path2;Name=comp159004_c0_seq1;Dir=sensecoverage=33.4;identity=99.0;matches=1201;mismatches=6;indels=6;unknowns=0;locus=RLOC_00003385
ChrX	stalkie_big_nohaplotig	exon	59205092	59205419	98	+	.	Parent=comp159004_c0_seq1.mrna2;Target=comp159004_c0_seq1 2397 2718 +
ChrX	stalkie_big_nohaplotig	exon	59207866	59208114	99	+	.	Parent=comp159004_c0_seq1.mrna2;Target=comp159004_c0_seq1 2719 2967 +
ChrX	stalkie_big_nohaplotig	exon	59208186	59208313	100	+	.	Parent=comp159004_c0_seq1.mrna2;Target=comp159004_c0_seq1 2968 3095 +
ChrX	stalkie_big_nohaplotig	exon	59208392	59208515	100	+	.	Parent=comp159004_c0_seq1.mrna2;Target=comp159004_c0_seq1 3096 3219 +
ChrX	stalkie_big_nohaplotig	exon	59208583	59208712	96	+	.	Parent=comp159004_c0_seq1.mrna2;Target=comp159004_c0_seq1 3220 3349 +
ChrX	stalkie_big_nohaplotig	exon	59211285	59211538	100	+	.	Parent=comp159004_c0_seq1.mrna2;Target=comp159004_c0_seq1 3350 3603 +
ChrX	stalkie_big_nohaplotig	CDS	59205108	59205419	.	+	0	Parent=comp159004_c0_seq1.mrna2;Target=comp159004_c0_seq1 2413 2718 +
ChrX	stalkie_big_nohaplotig	CDS	59207866	59208114	.	+	0	Parent=comp159004_c0_seq1.mrna2;Target=comp159004_c0_seq1 2719 2967 +
ChrX	stalkie_big_nohaplotig	CDS	59208186	59208313	.	+	0	Parent=comp159004_c0_seq1.mrna2;Target=comp159004_c0_seq1 2968 3095 +
ChrX	stalkie_big_nohaplotig	CDS	59208392	59208515	.	+	1	Parent=comp159004_c0_seq1.mrna2;Target=comp159004_c0_seq1 3096 3219 +
ChrX	stalkie_big_nohaplotig	CDS	59208583	59208712	.	+	0	Parent=comp159004_c0_seq1.mrna2;Target=comp159004_c0_seq1 3220 3349 +
ChrX	stalkie_big_nohaplotig	CDS	59211285	59211418	.	+	2	Parent=comp159004_c0_seq1.mrna2;Target=comp159004_c0_seq1 3350 3483 +
ChrX	gffcl	locus	59251999	59252659	.	+	.	ID=RLOC_00003387;geneIDs=FBgn0032849.1.path1;transcripts=FBgn0032849.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59251999	59252659	.	+	.	ID=FBgn0032849.1.mrna1;geneID=FBgn0032849.1.path1;Name=FBgn0032849.1;Dir=sensecoverage=100.0;identity=100.0;matches=603;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003387
ChrX	stalkie_big_nohaplotig	exon	59251999	59252288	100	+	.	Parent=FBgn0032849.1.mrna1;Target=FBgn0032849.1 1 290 +
ChrX	stalkie_big_nohaplotig	exon	59252347	59252659	100	+	.	Parent=FBgn0032849.1.mrna1;Target=FBgn0032849.1 291 603 +
ChrX	stalkie_big_nohaplotig	CDS	59251999	59252288	.	+	0	Parent=FBgn0032849.1.mrna1;Target=FBgn0032849.1 1 290 +
ChrX	stalkie_big_nohaplotig	CDS	59252347	59252659	.	+	1	Parent=FBgn0032849.1.mrna1;Target=FBgn0032849.1 291 603 +
ChrX	gffcl	locus	59252731	59254152	.	+	.	ID=RLOC_00003388;geneIDs=FBgn0032846.1.path1;transcripts=FBgn0032846.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59252731	59254152	.	+	.	ID=FBgn0032846.1.mrna1;geneID=FBgn0032846.1.path1;Name=FBgn0032846.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1422;mismatches=0;indels=0;unknowns=0;Target=FBgn0032846.1 1422 1 .;locus=RLOC_00003388
ChrX	stalkie_big_nohaplotig	exon	59252731	59254152	100	+	.	Parent=FBgn0032846.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59252731	59254152	.	+	0	Parent=FBgn0032846.1.mrna1
ChrX	gffcl	locus	59255816	59256369	.	-	.	ID=RLOC_00003389;geneIDs=FBgn0032847.1.path1;transcripts=FBgn0032847.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59255816	59256369	.	-	.	ID=FBgn0032847.1.mrna1;geneID=FBgn0032847.1.path1;Name=FBgn0032847.1;Dir=sensecoverage=100.0;identity=100.0;matches=501;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003389
ChrX	stalkie_big_nohaplotig	exon	59255816	59256175	100	-	.	Parent=FBgn0032847.1.mrna1;Target=FBgn0032847.1 142 501 +
ChrX	stalkie_big_nohaplotig	exon	59256229	59256369	100	-	.	Parent=FBgn0032847.1.mrna1;Target=FBgn0032847.1 1 141 +
ChrX	stalkie_big_nohaplotig	CDS	59255816	59256175	.	-	0	Parent=FBgn0032847.1.mrna1;Target=FBgn0032847.1 142 501 +
ChrX	stalkie_big_nohaplotig	CDS	59256229	59256369	.	-	0	Parent=FBgn0032847.1.mrna1;Target=FBgn0032847.1 1 141 +
ChrX	gffcl	locus	59258683	59260210	.	-	.	ID=RLOC_00003390;geneIDs=comp161420_c0_seq1.path1;transcripts=comp161420_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59258683	59260210	.	-	.	ID=comp161420_c0_seq1.mrna1;geneID=comp161420_c0_seq1.path1;Name=comp161420_c0_seq1;Dir=antisensecoverage=99.9;identity=95.2;matches=1302;mismatches=27;indels=39;unknowns=0;locus=RLOC_00003390
ChrX	stalkie_big_nohaplotig	exon	59258683	59259089	90	-	.	Parent=comp161420_c0_seq1.mrna1;Target=comp161420_c0_seq1 1 443 -
ChrX	stalkie_big_nohaplotig	exon	59259225	59259891	98	-	.	Parent=comp161420_c0_seq1.mrna1;Target=comp161420_c0_seq1 444 1110 -
ChrX	stalkie_big_nohaplotig	exon	59259953	59260210	95	-	.	Parent=comp161420_c0_seq1.mrna1;Target=comp161420_c0_seq1 1111 1365 -
ChrX	stalkie_big_nohaplotig	CDS	59259075	59259089	.	-	0	Parent=comp161420_c0_seq1.mrna1;Target=comp161420_c0_seq1 429 443 .
ChrX	stalkie_big_nohaplotig	CDS	59259225	59259377	.	-	0	Parent=comp161420_c0_seq1.mrna1;Target=comp161420_c0_seq1 444 596 .
ChrX	gffcl	locus	59261920	59263646	.	.	.	ID=RLOC_00003391;geneIDs=FBgn0032845.1.path1,comp159446_c0_seq1.path1;transcripts=comp159446_c0_seq1.mrna1,FBgn0032845.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59261920	59263646	.	-	.	ID=comp159446_c0_seq1.mrna1;geneID=comp159446_c0_seq1.path1;Name=comp159446_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1722;mismatches=5;indels=2;unknowns=0;Target=comp159446_c0_seq1 1729 1 .;CDS_Target=comp159446_c0_seq1 1541 1314 .;locus=RLOC_00003391
ChrX	stalkie_big_nohaplotig	exon	59261920	59263646	99	-	.	Parent=comp159446_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59262108	59262335	.	-	0	Parent=comp159446_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59262146	59263249	.	+	.	ID=FBgn0032845.1.mrna1;geneID=FBgn0032845.1.path1;Name=FBgn0032845.1;Dir=sensecoverage=100.0;identity=100.0;matches=1005;mismatches=0;indels=0;unknowns=9;locus=RLOC_00003391
ChrX	stalkie_big_nohaplotig	exon	59262146	59262224	100	+	.	Parent=FBgn0032845.1.mrna1;Target=FBgn0032845.1 1 79 +
ChrX	stalkie_big_nohaplotig	exon	59262315	59263249	100	+	.	Parent=FBgn0032845.1.mrna1;Target=FBgn0032845.1 80 1014 +
ChrX	stalkie_big_nohaplotig	CDS	59262146	59262224	.	+	0	Parent=FBgn0032845.1.mrna1;Target=FBgn0032845.1 1 79 +
ChrX	stalkie_big_nohaplotig	CDS	59262315	59263249	.	+	2	Parent=FBgn0032845.1.mrna1;Target=FBgn0032845.1 80 1014 +
ChrX	gffcl	locus	59265016	59318784	.	-	.	ID=RLOC_00003392;geneIDs=FBgn0004374.1.path1;transcripts=FBgn0004374.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59265016	59318784	.	-	.	ID=FBgn0004374.1.mrna1;geneID=FBgn0004374.1.path1;Name=FBgn0004374.1;Dir=sensecoverage=100.0;identity=99.9;matches=3526;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003392
ChrX	stalkie_big_nohaplotig	exon	59265016	59265894	100	-	.	Parent=FBgn0004374.1.mrna1;Target=FBgn0004374.1 2650 3528 +
ChrX	stalkie_big_nohaplotig	exon	59267666	59268019	99	-	.	Parent=FBgn0004374.1.mrna1;Target=FBgn0004374.1 2296 2649 +
ChrX	stalkie_big_nohaplotig	exon	59268081	59268264	100	-	.	Parent=FBgn0004374.1.mrna1;Target=FBgn0004374.1 2112 2295 +
ChrX	stalkie_big_nohaplotig	exon	59268337	59268947	100	-	.	Parent=FBgn0004374.1.mrna1;Target=FBgn0004374.1 1501 2111 +
ChrX	stalkie_big_nohaplotig	exon	59317285	59318784	100	-	.	Parent=FBgn0004374.1.mrna1;Target=FBgn0004374.1 1 1500 +
ChrX	stalkie_big_nohaplotig	CDS	59265016	59265894	.	-	0	Parent=FBgn0004374.1.mrna1;Target=FBgn0004374.1 2650 3528 +
ChrX	stalkie_big_nohaplotig	CDS	59267666	59268019	.	-	0	Parent=FBgn0004374.1.mrna1;Target=FBgn0004374.1 2296 2649 +
ChrX	stalkie_big_nohaplotig	CDS	59268081	59268264	.	-	1	Parent=FBgn0004374.1.mrna1;Target=FBgn0004374.1 2112 2295 +
ChrX	stalkie_big_nohaplotig	CDS	59268337	59268947	.	-	0	Parent=FBgn0004374.1.mrna1;Target=FBgn0004374.1 1501 2111 +
ChrX	stalkie_big_nohaplotig	CDS	59317285	59318784	.	-	0	Parent=FBgn0004374.1.mrna1;Target=FBgn0004374.1 1 1500 +
ChrX	gffcl	locus	59280308	59296405	.	+	.	ID=RLOC_00003393;geneIDs=FBgn0263773.1.path1;transcripts=FBgn0263773.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59280308	59296405	.	+	.	ID=FBgn0263773.1.mrna1;geneID=FBgn0263773.1.path1;Name=FBgn0263773.1;Dir=sensecoverage=100.0;identity=100.0;matches=429;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003393
ChrX	stalkie_big_nohaplotig	exon	59280308	59280509	100	+	.	Parent=FBgn0263773.1.mrna1;Target=FBgn0263773.1 1 202 +
ChrX	stalkie_big_nohaplotig	exon	59296179	59296405	100	+	.	Parent=FBgn0263773.1.mrna1;Target=FBgn0263773.1 203 429 +
ChrX	stalkie_big_nohaplotig	CDS	59280308	59280509	.	+	0	Parent=FBgn0263773.1.mrna1;Target=FBgn0263773.1 1 202 +
ChrX	stalkie_big_nohaplotig	CDS	59296179	59296405	.	+	2	Parent=FBgn0263773.1.mrna1;Target=FBgn0263773.1 203 429 +
ChrX	gffcl	locus	59297059	59297676	.	-	.	ID=RLOC_00003394;geneIDs=comp61108_c0_seq1.path2,comp166506_c0_seq1.path1;transcripts=comp166506_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59297059	59297384	.	-	.	ID=comp166506_c0_seq1.mrna1;geneID=comp166506_c0_seq1.path1;Name=comp166506_c0_seq1;Dir=indeterminatecoverage=98.2;identity=100.0;matches=326;mismatches=0;indels=0;unknowns=0;Target=comp166506_c0_seq1 326 1 .;CDS_Target=comp166506_c0_seq1 99 1 .;locus=RLOC_00003394
ChrX	stalkie_big_nohaplotig	exon	59297059	59297384	100	-	.	Parent=comp166506_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59297286	59297384	.	-	0	Parent=comp166506_c0_seq1.mrna1
ChrX	gffcl	locus	59307932	59309050	.	+	.	ID=RLOC_00003395;geneIDs=comp135909_c0_seq1.path1;transcripts=comp135909_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59307932	59309050	.	+	.	ID=comp135909_c0_seq1.mrna1;geneID=comp135909_c0_seq1.path1;Name=comp135909_c0_seq1;Dir=antisensecoverage=100.0;identity=96.2;matches=919;mismatches=3;indels=33;unknowns=0;locus=RLOC_00003395
ChrX	stalkie_big_nohaplotig	exon	59307932	59308107	100	+	.	Parent=comp135909_c0_seq1.mrna1;Target=comp135909_c0_seq1 779 954 -
ChrX	stalkie_big_nohaplotig	exon	59308304	59309050	95	+	.	Parent=comp135909_c0_seq1.mrna1;Target=comp135909_c0_seq1 1 778 -
ChrX	stalkie_big_nohaplotig	CDS	59308032	59308107	.	+	0	Parent=comp135909_c0_seq1.mrna1;Target=comp135909_c0_seq1 779 854 .
ChrX	stalkie_big_nohaplotig	CDS	59308304	59308527	.	+	2	Parent=comp135909_c0_seq1.mrna1;Target=comp135909_c0_seq1 555 778 .
ChrX	stalkie_big_nohaplotig	mRNA	59313318	59328172	.	+	.	ID=comp148668_c1_seq1.mrna1;geneID=comp148668_c1_seq1.path1;Name=comp148668_c1_seq1;Dir=indeterminatecoverage=61.1;identity=96.7;matches=723;mismatches=6;indels=19;unknowns=0;Target=comp148668_c1_seq1 1192 1061 .;locus=RLOC_00003396
ChrX	stalkie_big_nohaplotig	exon	59313318	59313327	100	+	.	Parent=comp148668_c1_seq1.mrna1;Target=comp148668_c1_seq1 478 469 .
ChrX	stalkie_big_nohaplotig	exon	59319385	59319391	100	+	.	Parent=comp148668_c1_seq1.mrna1;Target=comp148668_c1_seq1 485 479 .
ChrX	stalkie_big_nohaplotig	exon	59320175	59320203	51	+	.	Parent=comp148668_c1_seq1.mrna1;Target=comp148668_c1_seq1 506 486 .
ChrX	stalkie_big_nohaplotig	exon	59327476	59328172	98	+	.	Parent=comp148668_c1_seq1.mrna1;Target=comp148668_c1_seq1 1202 507 .
ChrX	stalkie_big_nohaplotig	CDS	59328031	59328162	.	+	0	Parent=comp148668_c1_seq1.mrna1
ChrX	gffcl	locus	59321894	59325057	.	-	.	ID=RLOC_00003397;geneIDs=FBgn0032744.1.path1;transcripts=FBgn0032744.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59321894	59325057	.	-	.	ID=FBgn0032744.1.mrna1;geneID=FBgn0032744.1.path1;Name=FBgn0032744.1;Dir=sensecoverage=100.0;identity=99.9;matches=1202;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003397
ChrX	stalkie_big_nohaplotig	exon	59321894	59322145	100	-	.	Parent=FBgn0032744.1.mrna1;Target=FBgn0032744.1 952 1203 +
ChrX	stalkie_big_nohaplotig	exon	59322226	59322373	100	-	.	Parent=FBgn0032744.1.mrna1;Target=FBgn0032744.1 804 951 +
ChrX	stalkie_big_nohaplotig	exon	59324196	59324359	100	-	.	Parent=FBgn0032744.1.mrna1;Target=FBgn0032744.1 640 803 +
ChrX	stalkie_big_nohaplotig	exon	59324419	59325057	99	-	.	Parent=FBgn0032744.1.mrna1;Target=FBgn0032744.1 1 639 +
ChrX	stalkie_big_nohaplotig	CDS	59321894	59322145	.	-	0	Parent=FBgn0032744.1.mrna1;Target=FBgn0032744.1 952 1203 +
ChrX	stalkie_big_nohaplotig	CDS	59322226	59322373	.	-	1	Parent=FBgn0032744.1.mrna1;Target=FBgn0032744.1 804 951 +
ChrX	stalkie_big_nohaplotig	CDS	59324196	59324359	.	-	0	Parent=FBgn0032744.1.mrna1;Target=FBgn0032744.1 640 803 +
ChrX	stalkie_big_nohaplotig	CDS	59324419	59325057	.	-	0	Parent=FBgn0032744.1.mrna1;Target=FBgn0032744.1 1 639 +
ChrX	gffcl	locus	59329194	59331130	.	-	.	ID=RLOC_00003398;geneIDs=comp159696_c0_seq1.path1;transcripts=comp159696_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59329194	59331130	.	-	.	ID=comp159696_c0_seq1.mrna1;geneID=comp159696_c0_seq1.path1;Name=comp159696_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=1937;mismatches=0;indels=0;unknowns=0;Target=comp159696_c0_seq1 1940 4 .;CDS_Target=comp159696_c0_seq1 494 405 .;locus=RLOC_00003398
ChrX	stalkie_big_nohaplotig	exon	59329194	59331130	100	-	.	Parent=comp159696_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59330640	59330729	.	-	0	Parent=comp159696_c0_seq1.mrna1
ChrX	gffcl	locus	59332318	59350151	.	-	.	ID=RLOC_00003399;geneIDs=FBgn0086442.1.path1;transcripts=FBgn0086442.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59332318	59350151	.	-	.	ID=FBgn0086442.1.mrna1;geneID=FBgn0086442.1.path1;Name=FBgn0086442.1;Dir=sensecoverage=100.0;identity=100.0;matches=3351;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003399
ChrX	stalkie_big_nohaplotig	exon	59332318	59334594	100	-	.	Parent=FBgn0086442.1.mrna1;Target=FBgn0086442.1 1075 3351 +
ChrX	stalkie_big_nohaplotig	exon	59334660	59334822	100	-	.	Parent=FBgn0086442.1.mrna1;Target=FBgn0086442.1 912 1074 +
ChrX	stalkie_big_nohaplotig	exon	59334905	59335100	100	-	.	Parent=FBgn0086442.1.mrna1;Target=FBgn0086442.1 716 911 +
ChrX	stalkie_big_nohaplotig	exon	59335179	59335364	100	-	.	Parent=FBgn0086442.1.mrna1;Target=FBgn0086442.1 530 715 +
ChrX	stalkie_big_nohaplotig	exon	59338820	59338935	100	-	.	Parent=FBgn0086442.1.mrna1;Target=FBgn0086442.1 414 529 +
ChrX	stalkie_big_nohaplotig	exon	59340511	59340682	100	-	.	Parent=FBgn0086442.1.mrna1;Target=FBgn0086442.1 242 413 +
ChrX	stalkie_big_nohaplotig	exon	59340786	59340953	100	-	.	Parent=FBgn0086442.1.mrna1;Target=FBgn0086442.1 74 241 +
ChrX	stalkie_big_nohaplotig	exon	59350079	59350151	100	-	.	Parent=FBgn0086442.1.mrna1;Target=FBgn0086442.1 1 73 +
ChrX	stalkie_big_nohaplotig	CDS	59332318	59334594	.	-	0	Parent=FBgn0086442.1.mrna1;Target=FBgn0086442.1 1075 3351 +
ChrX	stalkie_big_nohaplotig	CDS	59334660	59334822	.	-	1	Parent=FBgn0086442.1.mrna1;Target=FBgn0086442.1 912 1074 +
ChrX	stalkie_big_nohaplotig	CDS	59334905	59335100	.	-	2	Parent=FBgn0086442.1.mrna1;Target=FBgn0086442.1 716 911 +
ChrX	stalkie_big_nohaplotig	CDS	59335179	59335364	.	-	2	Parent=FBgn0086442.1.mrna1;Target=FBgn0086442.1 530 715 +
ChrX	stalkie_big_nohaplotig	CDS	59338820	59338935	.	-	1	Parent=FBgn0086442.1.mrna1;Target=FBgn0086442.1 414 529 +
ChrX	stalkie_big_nohaplotig	CDS	59340511	59340682	.	-	2	Parent=FBgn0086442.1.mrna1;Target=FBgn0086442.1 242 413 +
ChrX	stalkie_big_nohaplotig	CDS	59340786	59340953	.	-	2	Parent=FBgn0086442.1.mrna1;Target=FBgn0086442.1 74 241 +
ChrX	stalkie_big_nohaplotig	CDS	59350079	59350151	.	-	0	Parent=FBgn0086442.1.mrna1;Target=FBgn0086442.1 1 73 +
ChrX	gffcl	locus	59370943	59372006	.	-	.	ID=RLOC_00003400;geneIDs=FBgn0032032.1.path1;transcripts=FBgn0032032.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59370943	59372006	.	-	.	ID=FBgn0032032.1.mrna1;geneID=FBgn0032032.1.path1;Name=FBgn0032032.1;Dir=sensecoverage=100.0;identity=100.0;matches=879;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003400
ChrX	stalkie_big_nohaplotig	exon	59370943	59371107	100	-	.	Parent=FBgn0032032.1.mrna1;Target=FBgn0032032.1 715 879 +
ChrX	stalkie_big_nohaplotig	exon	59371176	59371395	100	-	.	Parent=FBgn0032032.1.mrna1;Target=FBgn0032032.1 495 714 +
ChrX	stalkie_big_nohaplotig	exon	59371453	59371749	100	-	.	Parent=FBgn0032032.1.mrna1;Target=FBgn0032032.1 198 494 +
ChrX	stalkie_big_nohaplotig	exon	59371810	59372006	100	-	.	Parent=FBgn0032032.1.mrna1;Target=FBgn0032032.1 1 197 +
ChrX	stalkie_big_nohaplotig	CDS	59370943	59371107	.	-	0	Parent=FBgn0032032.1.mrna1;Target=FBgn0032032.1 715 879 +
ChrX	stalkie_big_nohaplotig	CDS	59371176	59371395	.	-	1	Parent=FBgn0032032.1.mrna1;Target=FBgn0032032.1 495 714 +
ChrX	stalkie_big_nohaplotig	CDS	59371453	59371749	.	-	1	Parent=FBgn0032032.1.mrna1;Target=FBgn0032032.1 198 494 +
ChrX	stalkie_big_nohaplotig	CDS	59371810	59372006	.	-	0	Parent=FBgn0032032.1.mrna1;Target=FBgn0032032.1 1 197 +
ChrX	gffcl	locus	59372643	59373935	.	+	.	ID=RLOC_00003401;geneIDs=FBgn0032031.1.path1;transcripts=FBgn0032031.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59372643	59373935	.	+	.	ID=FBgn0032031.1.mrna1;geneID=FBgn0032031.1.path1;Name=FBgn0032031.1;Dir=sensecoverage=100.0;identity=99.6;matches=1225;mismatches=5;indels=0;unknowns=0;locus=RLOC_00003401
ChrX	stalkie_big_nohaplotig	exon	59372643	59372867	100	+	.	Parent=FBgn0032031.1.mrna1;Target=FBgn0032031.1 1 225 +
ChrX	stalkie_big_nohaplotig	exon	59372931	59373935	99	+	.	Parent=FBgn0032031.1.mrna1;Target=FBgn0032031.1 226 1230 +
ChrX	stalkie_big_nohaplotig	CDS	59372643	59372867	.	+	0	Parent=FBgn0032031.1.mrna1;Target=FBgn0032031.1 1 225 +
ChrX	stalkie_big_nohaplotig	CDS	59372931	59373935	.	+	0	Parent=FBgn0032031.1.mrna1;Target=FBgn0032031.1 226 1230 +
ChrX	gffcl	locus	59378500	59382205	.	-	.	ID=RLOC_00003402;geneIDs=FBgn0032029.1.path1;transcripts=FBgn0032029.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59378500	59382205	.	-	.	ID=FBgn0032029.1.mrna1;geneID=FBgn0032029.1.path1;Name=FBgn0032029.1;Dir=sensecoverage=91.4;identity=99.7;matches=1034;mismatches=0;indels=3;unknowns=0;locus=RLOC_00003402
ChrX	stalkie_big_nohaplotig	exon	59378500	59378638	97	-	.	Parent=FBgn0032029.1.mrna1;Target=FBgn0032029.1 993 1134 +
ChrX	stalkie_big_nohaplotig	exon	59378741	59378909	100	-	.	Parent=FBgn0032029.1.mrna1;Target=FBgn0032029.1 824 992 +
ChrX	stalkie_big_nohaplotig	exon	59379027	59379244	100	-	.	Parent=FBgn0032029.1.mrna1;Target=FBgn0032029.1 606 823 +
ChrX	stalkie_big_nohaplotig	exon	59379303	59379460	100	-	.	Parent=FBgn0032029.1.mrna1;Target=FBgn0032029.1 448 605 +
ChrX	stalkie_big_nohaplotig	exon	59379560	59379809	100	-	.	Parent=FBgn0032029.1.mrna1;Target=FBgn0032029.1 198 447 +
ChrX	stalkie_big_nohaplotig	exon	59380967	59381033	100	-	.	Parent=FBgn0032029.1.mrna1;Target=FBgn0032029.1 131 197 +
ChrX	stalkie_big_nohaplotig	exon	59382173	59382205	100	-	.	Parent=FBgn0032029.1.mrna1;Target=FBgn0032029.1 98 130 +
ChrX	stalkie_big_nohaplotig	CDS	59378500	59378638	.	-	1	Parent=FBgn0032029.1.mrna1;Target=FBgn0032029.1 993 1134 +
ChrX	stalkie_big_nohaplotig	CDS	59378741	59378909	.	-	2	Parent=FBgn0032029.1.mrna1;Target=FBgn0032029.1 824 992 +
ChrX	stalkie_big_nohaplotig	CDS	59379027	59379244	.	-	1	Parent=FBgn0032029.1.mrna1;Target=FBgn0032029.1 606 823 +
ChrX	stalkie_big_nohaplotig	CDS	59379303	59379460	.	-	0	Parent=FBgn0032029.1.mrna1;Target=FBgn0032029.1 448 605 +
ChrX	stalkie_big_nohaplotig	CDS	59379560	59379809	.	-	1	Parent=FBgn0032029.1.mrna1;Target=FBgn0032029.1 198 447 +
ChrX	stalkie_big_nohaplotig	CDS	59380967	59381033	.	-	2	Parent=FBgn0032029.1.mrna1;Target=FBgn0032029.1 131 197 +
ChrX	stalkie_big_nohaplotig	CDS	59382173	59382203	.	-	0	Parent=FBgn0032029.1.mrna1;Target=FBgn0032029.1 100 130 +
ChrX	gffcl	locus	59387713	61370261	.	-	.	ID=RLOC_00003403;geneIDs=comp53802_c0_seq1.path1;transcripts=comp53802_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59387713	61370261	.	-	.	ID=comp53802_c0_seq1.mrna1;geneID=comp53802_c0_seq1.path1;Name=comp53802_c0_seq1;Dir=indeterminatecoverage=92.6;identity=99.7;matches=372;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003403
ChrX	stalkie_big_nohaplotig	exon	59387713	59387724	100	-	.	Parent=comp53802_c0_seq1.mrna1;Target=comp53802_c0_seq1 376 365 .
ChrX	stalkie_big_nohaplotig	exon	59392166	59392171	100	-	.	Parent=comp53802_c0_seq1.mrna1;Target=comp53802_c0_seq1 364 359 .
ChrX	stalkie_big_nohaplotig	exon	59400589	59400596	100	-	.	Parent=comp53802_c0_seq1.mrna1;Target=comp53802_c0_seq1 358 351 .
ChrX	stalkie_big_nohaplotig	exon	59403622	59403626	100	-	.	Parent=comp53802_c0_seq1.mrna1;Target=comp53802_c0_seq1 350 346 .
ChrX	stalkie_big_nohaplotig	exon	59410089	59410093	100	-	.	Parent=comp53802_c0_seq1.mrna1;Target=comp53802_c0_seq1 345 341 .
ChrX	stalkie_big_nohaplotig	exon	61369925	61370261	99	-	.	Parent=comp53802_c0_seq1.mrna1;Target=comp53802_c0_seq1 340 4 .
ChrX	stalkie_big_nohaplotig	CDS	59387715	59387724	.	-	1	Parent=comp53802_c0_seq1.mrna1;Target=comp53802_c0_seq1 374 365 .
ChrX	stalkie_big_nohaplotig	CDS	59392166	59392171	.	-	1	Parent=comp53802_c0_seq1.mrna1;Target=comp53802_c0_seq1 364 359 .
ChrX	stalkie_big_nohaplotig	CDS	59400589	59400596	.	-	0	Parent=comp53802_c0_seq1.mrna1;Target=comp53802_c0_seq1 358 351 .
ChrX	stalkie_big_nohaplotig	CDS	59403622	59403626	.	-	2	Parent=comp53802_c0_seq1.mrna1;Target=comp53802_c0_seq1 350 346 .
ChrX	stalkie_big_nohaplotig	CDS	59410089	59410093	.	-	1	Parent=comp53802_c0_seq1.mrna1;Target=comp53802_c0_seq1 345 341 .
ChrX	stalkie_big_nohaplotig	CDS	61369925	61370088	.	-	0	Parent=comp53802_c0_seq1.mrna1;Target=comp53802_c0_seq1 340 177 .
ChrX	gffcl	locus	59407879	59408695	.	-	.	ID=RLOC_00003404;geneIDs=comp145836_c0_seq1.path1;transcripts=comp145836_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59407879	59408695	.	-	.	ID=comp145836_c0_seq1.mrna1;geneID=comp145836_c0_seq1.path1;Name=comp145836_c0_seq1;Dir=sensecoverage=100.0;identity=99.0;matches=679;mismatches=1;indels=6;unknowns=0;locus=RLOC_00003404
ChrX	stalkie_big_nohaplotig	exon	59407879	59408251	98	-	.	Parent=comp145836_c0_seq1.mrna1;Target=comp145836_c0_seq1 308 686 +
ChrX	stalkie_big_nohaplotig	exon	59408317	59408589	100	-	.	Parent=comp145836_c0_seq1.mrna1;Target=comp145836_c0_seq1 35 307 +
ChrX	stalkie_big_nohaplotig	exon	59408662	59408695	100	-	.	Parent=comp145836_c0_seq1.mrna1;Target=comp145836_c0_seq1 1 34 +
ChrX	stalkie_big_nohaplotig	CDS	59408124	59408251	.	-	2	Parent=comp145836_c0_seq1.mrna1;Target=comp145836_c0_seq1 308 435 +
ChrX	stalkie_big_nohaplotig	CDS	59408317	59408589	.	-	2	Parent=comp145836_c0_seq1.mrna1;Target=comp145836_c0_seq1 35 307 +
ChrX	stalkie_big_nohaplotig	CDS	59408662	59408695	.	-	0	Parent=comp145836_c0_seq1.mrna1;Target=comp145836_c0_seq1 1 34 +
ChrX	gffcl	locus	59418077	59439792	.	-	.	ID=RLOC_00003405;geneIDs=FBgn0260439.1.path1,comp155928_c2_seq1.path1;transcripts=comp155928_c2_seq1.mrna1,FBgn0260439.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59418077	59439792	.	-	.	ID=comp155928_c2_seq1.mrna1;geneID=comp155928_c2_seq1.path1;Name=comp155928_c2_seq1;Dir=antisensecoverage=99.1;identity=100.0;matches=2831;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003405
ChrX	stalkie_big_nohaplotig	exon	59418077	59418530	100	-	.	Parent=comp155928_c2_seq1.mrna1;Target=comp155928_c2_seq1 27 480 -
ChrX	stalkie_big_nohaplotig	exon	59421814	59422086	100	-	.	Parent=comp155928_c2_seq1.mrna1;Target=comp155928_c2_seq1 481 753 -
ChrX	stalkie_big_nohaplotig	exon	59422153	59422438	100	-	.	Parent=comp155928_c2_seq1.mrna1;Target=comp155928_c2_seq1 754 1039 -
ChrX	stalkie_big_nohaplotig	exon	59424806	59425147	100	-	.	Parent=comp155928_c2_seq1.mrna1;Target=comp155928_c2_seq1 1040 1381 -
ChrX	stalkie_big_nohaplotig	exon	59425218	59425373	100	-	.	Parent=comp155928_c2_seq1.mrna1;Target=comp155928_c2_seq1 1382 1537 -
ChrX	stalkie_big_nohaplotig	exon	59425424	59425498	100	-	.	Parent=comp155928_c2_seq1.mrna1;Target=comp155928_c2_seq1 1538 1612 -
ChrX	stalkie_big_nohaplotig	exon	59425629	59426047	100	-	.	Parent=comp155928_c2_seq1.mrna1;Target=comp155928_c2_seq1 1613 2031 -
ChrX	stalkie_big_nohaplotig	exon	59426117	59426270	100	-	.	Parent=comp155928_c2_seq1.mrna1;Target=comp155928_c2_seq1 2032 2185 -
ChrX	stalkie_big_nohaplotig	exon	59439121	59439792	100	-	.	Parent=comp155928_c2_seq1.mrna1;Target=comp155928_c2_seq1 2186 2857 -
ChrX	stalkie_big_nohaplotig	CDS	59418526	59418530	.	-	2	Parent=comp155928_c2_seq1.mrna1;Target=comp155928_c2_seq1 476 480 .
ChrX	stalkie_big_nohaplotig	CDS	59421814	59422086	.	-	2	Parent=comp155928_c2_seq1.mrna1;Target=comp155928_c2_seq1 481 753 .
ChrX	stalkie_big_nohaplotig	CDS	59422153	59422438	.	-	0	Parent=comp155928_c2_seq1.mrna1;Target=comp155928_c2_seq1 754 1039 .
ChrX	stalkie_big_nohaplotig	CDS	59424806	59425147	.	-	0	Parent=comp155928_c2_seq1.mrna1;Target=comp155928_c2_seq1 1040 1381 .
ChrX	stalkie_big_nohaplotig	CDS	59425218	59425373	.	-	0	Parent=comp155928_c2_seq1.mrna1;Target=comp155928_c2_seq1 1382 1537 .
ChrX	stalkie_big_nohaplotig	CDS	59425424	59425498	.	-	0	Parent=comp155928_c2_seq1.mrna1;Target=comp155928_c2_seq1 1538 1612 .
ChrX	stalkie_big_nohaplotig	CDS	59425629	59426047	.	-	2	Parent=comp155928_c2_seq1.mrna1;Target=comp155928_c2_seq1 1613 2031 .
ChrX	stalkie_big_nohaplotig	CDS	59426117	59426270	.	-	0	Parent=comp155928_c2_seq1.mrna1;Target=comp155928_c2_seq1 2032 2185 .
ChrX	stalkie_big_nohaplotig	CDS	59439121	59439204	.	-	0	Parent=comp155928_c2_seq1.mrna1;Target=comp155928_c2_seq1 2186 2269 .
ChrX	stalkie_big_nohaplotig	mRNA	59421814	59439210	.	-	.	ID=FBgn0260439.1.mrna1;geneID=FBgn0260439.1.path1;Name=FBgn0260439.1;Dir=sensecoverage=99.9;identity=100.0;matches=1777;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003405
ChrX	stalkie_big_nohaplotig	exon	59421814	59422086	100	-	.	Parent=FBgn0260439.1.mrna1;Target=FBgn0260439.1 1505 1777 +
ChrX	stalkie_big_nohaplotig	exon	59422153	59422438	100	-	.	Parent=FBgn0260439.1.mrna1;Target=FBgn0260439.1 1219 1504 +
ChrX	stalkie_big_nohaplotig	exon	59424806	59425147	100	-	.	Parent=FBgn0260439.1.mrna1;Target=FBgn0260439.1 877 1218 +
ChrX	stalkie_big_nohaplotig	exon	59425218	59425355	100	-	.	Parent=FBgn0260439.1.mrna1;Target=FBgn0260439.1 739 876 +
ChrX	stalkie_big_nohaplotig	exon	59425424	59425498	100	-	.	Parent=FBgn0260439.1.mrna1;Target=FBgn0260439.1 664 738 +
ChrX	stalkie_big_nohaplotig	exon	59425629	59426047	100	-	.	Parent=FBgn0260439.1.mrna1;Target=FBgn0260439.1 245 663 +
ChrX	stalkie_big_nohaplotig	exon	59426117	59426270	100	-	.	Parent=FBgn0260439.1.mrna1;Target=FBgn0260439.1 91 244 +
ChrX	stalkie_big_nohaplotig	exon	59439121	59439210	100	-	.	Parent=FBgn0260439.1.mrna1;Target=FBgn0260439.1 1 90 +
ChrX	stalkie_big_nohaplotig	CDS	59421815	59422086	.	-	2	Parent=FBgn0260439.1.mrna1;Target=FBgn0260439.1 1505 1776 +
ChrX	stalkie_big_nohaplotig	CDS	59422153	59422438	.	-	0	Parent=FBgn0260439.1.mrna1;Target=FBgn0260439.1 1219 1504 +
ChrX	stalkie_big_nohaplotig	CDS	59424806	59425147	.	-	0	Parent=FBgn0260439.1.mrna1;Target=FBgn0260439.1 877 1218 +
ChrX	stalkie_big_nohaplotig	CDS	59425218	59425355	.	-	0	Parent=FBgn0260439.1.mrna1;Target=FBgn0260439.1 739 876 +
ChrX	stalkie_big_nohaplotig	CDS	59425424	59425498	.	-	0	Parent=FBgn0260439.1.mrna1;Target=FBgn0260439.1 664 738 +
ChrX	stalkie_big_nohaplotig	CDS	59425629	59426047	.	-	2	Parent=FBgn0260439.1.mrna1;Target=FBgn0260439.1 245 663 +
ChrX	stalkie_big_nohaplotig	CDS	59426117	59426270	.	-	0	Parent=FBgn0260439.1.mrna1;Target=FBgn0260439.1 91 244 +
ChrX	stalkie_big_nohaplotig	CDS	59439121	59439210	.	-	0	Parent=FBgn0260439.1.mrna1;Target=FBgn0260439.1 1 90 +
ChrX	gffcl	locus	59419005	59419776	.	-	.	ID=RLOC_00003406;geneIDs=comp155312_c0_seq1.path1;transcripts=comp155312_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59419005	59419776	.	-	.	ID=comp155312_c0_seq1.mrna1;geneID=comp155312_c0_seq1.path1;Name=comp155312_c0_seq1;Dir=indeterminatecoverage=95.3;identity=99.4;matches=767;mismatches=5;indels=0;unknowns=0;Target=comp155312_c0_seq1 772 1 .;CDS_Target=comp155312_c0_seq1 429 277 .;locus=RLOC_00003406
ChrX	stalkie_big_nohaplotig	exon	59419005	59419776	99	-	.	Parent=comp155312_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59419348	59419500	.	-	0	Parent=comp155312_c0_seq1.mrna1
ChrX	gffcl	locus	59442676	59443437	.	-	.	ID=RLOC_00003407;geneIDs=FBgn0261437.1.path1;transcripts=FBgn0261437.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59442676	59443437	.	-	.	ID=FBgn0261437.1.mrna1;geneID=FBgn0261437.1.path1;Name=FBgn0261437.1;Dir=sensecoverage=100.0;identity=100.0;matches=579;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003407
ChrX	stalkie_big_nohaplotig	exon	59442676	59442929	100	-	.	Parent=FBgn0261437.1.mrna1;Target=FBgn0261437.1 326 579 +
ChrX	stalkie_big_nohaplotig	exon	59442985	59443160	100	-	.	Parent=FBgn0261437.1.mrna1;Target=FBgn0261437.1 150 325 +
ChrX	stalkie_big_nohaplotig	exon	59443228	59443292	100	-	.	Parent=FBgn0261437.1.mrna1;Target=FBgn0261437.1 85 149 +
ChrX	stalkie_big_nohaplotig	exon	59443354	59443437	100	-	.	Parent=FBgn0261437.1.mrna1;Target=FBgn0261437.1 1 84 +
ChrX	stalkie_big_nohaplotig	CDS	59442676	59442929	.	-	2	Parent=FBgn0261437.1.mrna1;Target=FBgn0261437.1 326 579 +
ChrX	stalkie_big_nohaplotig	CDS	59442985	59443160	.	-	1	Parent=FBgn0261437.1.mrna1;Target=FBgn0261437.1 150 325 +
ChrX	stalkie_big_nohaplotig	CDS	59443228	59443292	.	-	0	Parent=FBgn0261437.1.mrna1;Target=FBgn0261437.1 85 149 +
ChrX	stalkie_big_nohaplotig	CDS	59443354	59443437	.	-	0	Parent=FBgn0261437.1.mrna1;Target=FBgn0261437.1 1 84 +
ChrX	gffcl	locus	59483149	59662225	.	-	.	ID=RLOC_00003408;geneIDs=comp163859_c4_seq1.path1;transcripts=comp163859_c4_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59483149	59662225	.	-	.	ID=comp163859_c4_seq1.mrna1;geneID=comp163859_c4_seq1.path1;Name=comp163859_c4_seq1;Dir=indeterminatecoverage=64.7;identity=97.0;matches=829;mismatches=18;indels=8;unknowns=0;Target=comp163859_c4_seq1 509 198 .;locus=RLOC_00003408
ChrX	stalkie_big_nohaplotig	exon	59483149	59483155	100	-	.	Parent=comp163859_c4_seq1.mrna1;Target=comp163859_c4_seq1 1081 1075 .
ChrX	stalkie_big_nohaplotig	exon	59488081	59488085	100	-	.	Parent=comp163859_c4_seq1.mrna1;Target=comp163859_c4_seq1 1067 1063 .
ChrX	stalkie_big_nohaplotig	exon	59501449	59501454	100	-	.	Parent=comp163859_c4_seq1.mrna1;Target=comp163859_c4_seq1 1062 1057 .
ChrX	stalkie_big_nohaplotig	exon	59503471	59503477	100	-	.	Parent=comp163859_c4_seq1.mrna1;Target=comp163859_c4_seq1 1056 1050 .
ChrX	stalkie_big_nohaplotig	exon	59567458	59567467	100	-	.	Parent=comp163859_c4_seq1.mrna1;Target=comp163859_c4_seq1 1039 1030 .
ChrX	stalkie_big_nohaplotig	exon	59573252	59573260	100	-	.	Parent=comp163859_c4_seq1.mrna1;Target=comp163859_c4_seq1 1014 1006 .
ChrX	stalkie_big_nohaplotig	exon	59574225	59574245	55	-	.	Parent=comp163859_c4_seq1.mrna1;Target=comp163859_c4_seq1 1005 977 .
ChrX	stalkie_big_nohaplotig	exon	59606793	59606803	100	-	.	Parent=comp163859_c4_seq1.mrna1;Target=comp163859_c4_seq1 939 929 .
ChrX	stalkie_big_nohaplotig	exon	59610971	59610972	100	-	.	Parent=comp163859_c4_seq1.mrna1;Target=comp163859_c4_seq1 928 927 .
ChrX	stalkie_big_nohaplotig	exon	59613911	59613919	100	-	.	Parent=comp163859_c4_seq1.mrna1;Target=comp163859_c4_seq1 823 815 .
ChrX	stalkie_big_nohaplotig	exon	59626596	59626598	100	-	.	Parent=comp163859_c4_seq1.mrna1;Target=comp163859_c4_seq1 814 812 .
ChrX	stalkie_big_nohaplotig	exon	59641255	59641264	90	-	.	Parent=comp163859_c4_seq1.mrna1;Target=comp163859_c4_seq1 811 802 .
ChrX	stalkie_big_nohaplotig	exon	59661484	59662225	98	-	.	Parent=comp163859_c4_seq1.mrna1;Target=comp163859_c4_seq1 742 1 .
ChrX	stalkie_big_nohaplotig	CDS	59661717	59662028	.	-	0	Parent=comp163859_c4_seq1.mrna1
ChrX	gffcl	locus	59510490	59510970	.	+	.	ID=RLOC_00003409;geneIDs=comp115589_c0_seq1.path1;transcripts=comp115589_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59510490	59510970	.	+	.	ID=comp115589_c0_seq1.mrna1;geneID=comp115589_c0_seq1.path1;Name=comp115589_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=481;mismatches=0;indels=0;unknowns=0;Target=comp115589_c0_seq1 481 1 .;CDS_Target=comp115589_c0_seq1 218 3 .;locus=RLOC_00003409
ChrX	stalkie_big_nohaplotig	exon	59510490	59510970	100	+	.	Parent=comp115589_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59510492	59510707	.	+	0	Parent=comp115589_c0_seq1.mrna1
ChrX	gffcl	locus	59527106	59527401	.	-	.	ID=RLOC_00003411;geneIDs=comp111043_c0_seq1.path1;transcripts=comp111043_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59527106	59527401	.	-	.	ID=comp111043_c0_seq1.mrna1;geneID=comp111043_c0_seq1.path1;Name=comp111043_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=295;mismatches=1;indels=0;unknowns=0;Target=comp111043_c0_seq1 296 1 .;CDS_Target=comp111043_c0_seq1 294 163 .;locus=RLOC_00003411
ChrX	stalkie_big_nohaplotig	exon	59527106	59527401	99	-	.	Parent=comp111043_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59527108	59527239	.	-	0	Parent=comp111043_c0_seq1.mrna1
ChrX	gffcl	locus	59528815	59529158	.	-	.	ID=RLOC_00003412;geneIDs=comp146050_c0_seq1.path1;transcripts=comp146050_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59528815	59529158	.	-	.	ID=comp146050_c0_seq1.mrna1;geneID=comp146050_c0_seq1.path1;Name=comp146050_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=344;mismatches=0;indels=0;unknowns=0;Target=comp146050_c0_seq1 344 1 .;CDS_Target=comp146050_c0_seq1 88 2 .;locus=RLOC_00003412
ChrX	stalkie_big_nohaplotig	exon	59528815	59529158	100	-	.	Parent=comp146050_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59529071	59529157	.	-	0	Parent=comp146050_c0_seq1.mrna1
ChrX	gffcl	locus	59529331	59529911	.	+	.	ID=RLOC_00003413;geneIDs=comp149722_c0_seq1.path1;transcripts=comp149722_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59529331	59529911	.	+	.	ID=comp149722_c0_seq1.mrna1;geneID=comp149722_c0_seq1.path1;Name=comp149722_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.8;matches=575;mismatches=6;indels=1;unknowns=0;Target=comp149722_c0_seq1 583 2 .;CDS_Target=comp149722_c0_seq1 141 4 .;locus=RLOC_00003413
ChrX	stalkie_big_nohaplotig	exon	59529331	59529911	98	+	.	Parent=comp149722_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59529333	59529470	.	+	0	Parent=comp149722_c0_seq1.mrna1
ChrX	gffcl	locus	59530289	59530628	.	+	.	ID=RLOC_00003414;geneIDs=comp112391_c0_seq1.path1;transcripts=comp112391_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59530289	59530628	.	+	.	ID=comp112391_c0_seq1.mrna1;geneID=comp112391_c0_seq1.path1;Name=comp112391_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=338;mismatches=2;indels=0;unknowns=0;Target=comp112391_c0_seq1 340 1 .;CDS_Target=comp112391_c0_seq1 61 2 .;locus=RLOC_00003414
ChrX	stalkie_big_nohaplotig	exon	59530289	59530628	99	+	.	Parent=comp112391_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59530290	59530349	.	+	0	Parent=comp112391_c0_seq1.mrna1
ChrX	gffcl	locus	59530820	59531350	.	-	.	ID=RLOC_00003415;geneIDs=comp90947_c0_seq1.path1;transcripts=comp90947_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59530820	59531350	.	-	.	ID=comp90947_c0_seq1.mrna1;geneID=comp90947_c0_seq1.path1;Name=comp90947_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=530;mismatches=1;indels=0;unknowns=0;Target=comp90947_c0_seq1 531 1 .;CDS_Target=comp90947_c0_seq1 385 353 .;locus=RLOC_00003415
ChrX	stalkie_big_nohaplotig	exon	59530820	59531350	99	-	.	Parent=comp90947_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59530966	59530998	.	-	0	Parent=comp90947_c0_seq1.mrna1
ChrX	gffcl	locus	59534771	59544011	.	-	.	ID=RLOC_00003416;geneIDs=FBgn0001202.1.path1,comp148256_c0_seq1.path1;transcripts=FBgn0001202.1.mrna1,comp148256_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59534771	59544011	.	-	.	ID=FBgn0001202.1.mrna1;geneID=FBgn0001202.1.path1;Name=FBgn0001202.1;Dir=sensecoverage=100.0;identity=99.9;matches=1991;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003416
ChrX	stalkie_big_nohaplotig	exon	59534771	59534882	99	-	.	Parent=FBgn0001202.1.mrna1;Target=FBgn0001202.1 1881 1992 +
ChrX	stalkie_big_nohaplotig	exon	59534955	59535057	100	-	.	Parent=FBgn0001202.1.mrna1;Target=FBgn0001202.1 1778 1880 +
ChrX	stalkie_big_nohaplotig	exon	59538370	59538546	100	-	.	Parent=FBgn0001202.1.mrna1;Target=FBgn0001202.1 1601 1777 +
ChrX	stalkie_big_nohaplotig	exon	59538698	59538750	100	-	.	Parent=FBgn0001202.1.mrna1;Target=FBgn0001202.1 1548 1600 +
ChrX	stalkie_big_nohaplotig	exon	59538824	59538942	100	-	.	Parent=FBgn0001202.1.mrna1;Target=FBgn0001202.1 1429 1547 +
ChrX	stalkie_big_nohaplotig	exon	59539709	59539830	100	-	.	Parent=FBgn0001202.1.mrna1;Target=FBgn0001202.1 1307 1428 +
ChrX	stalkie_big_nohaplotig	exon	59542388	59542577	100	-	.	Parent=FBgn0001202.1.mrna1;Target=FBgn0001202.1 1117 1306 +
ChrX	stalkie_big_nohaplotig	exon	59542686	59542937	100	-	.	Parent=FBgn0001202.1.mrna1;Target=FBgn0001202.1 865 1116 +
ChrX	stalkie_big_nohaplotig	exon	59543024	59543308	100	-	.	Parent=FBgn0001202.1.mrna1;Target=FBgn0001202.1 580 864 +
ChrX	stalkie_big_nohaplotig	exon	59543366	59543790	100	-	.	Parent=FBgn0001202.1.mrna1;Target=FBgn0001202.1 155 579 +
ChrX	stalkie_big_nohaplotig	exon	59543858	59544011	100	-	.	Parent=FBgn0001202.1.mrna1;Target=FBgn0001202.1 1 154 +
ChrX	stalkie_big_nohaplotig	CDS	59534771	59534882	.	-	1	Parent=FBgn0001202.1.mrna1;Target=FBgn0001202.1 1881 1992 +
ChrX	stalkie_big_nohaplotig	CDS	59534955	59535057	.	-	2	Parent=FBgn0001202.1.mrna1;Target=FBgn0001202.1 1778 1880 +
ChrX	stalkie_big_nohaplotig	CDS	59538370	59538546	.	-	2	Parent=FBgn0001202.1.mrna1;Target=FBgn0001202.1 1601 1777 +
ChrX	stalkie_big_nohaplotig	CDS	59538698	59538750	.	-	1	Parent=FBgn0001202.1.mrna1;Target=FBgn0001202.1 1548 1600 +
ChrX	stalkie_big_nohaplotig	CDS	59538824	59538942	.	-	0	Parent=FBgn0001202.1.mrna1;Target=FBgn0001202.1 1429 1547 +
ChrX	stalkie_big_nohaplotig	CDS	59539709	59539830	.	-	2	Parent=FBgn0001202.1.mrna1;Target=FBgn0001202.1 1307 1428 +
ChrX	stalkie_big_nohaplotig	CDS	59542388	59542577	.	-	0	Parent=FBgn0001202.1.mrna1;Target=FBgn0001202.1 1117 1306 +
ChrX	stalkie_big_nohaplotig	CDS	59542686	59542937	.	-	0	Parent=FBgn0001202.1.mrna1;Target=FBgn0001202.1 865 1116 +
ChrX	stalkie_big_nohaplotig	CDS	59543024	59543308	.	-	0	Parent=FBgn0001202.1.mrna1;Target=FBgn0001202.1 580 864 +
ChrX	stalkie_big_nohaplotig	CDS	59543366	59543790	.	-	2	Parent=FBgn0001202.1.mrna1;Target=FBgn0001202.1 155 579 +
ChrX	stalkie_big_nohaplotig	CDS	59543858	59544011	.	-	0	Parent=FBgn0001202.1.mrna1;Target=FBgn0001202.1 1 154 +
ChrX	stalkie_big_nohaplotig	mRNA	59535036	59538393	.	-	.	ID=comp148256_c0_seq1.mrna1;geneID=comp148256_c0_seq1.path1;Name=comp148256_c0_seq1;Dir=sensecoverage=100.0;identity=93.2;matches=722;mismatches=7;indels=46;unknowns=0;Target=comp148256_c0_seq1 511 666 +;locus=RLOC_00003416
ChrX	stalkie_big_nohaplotig	exon	59535036	59535740	92	-	.	Parent=comp148256_c0_seq1.mrna1;Target=comp148256_c0_seq1 25 775 +
ChrX	stalkie_big_nohaplotig	exon	59538370	59538393	100	-	.	Parent=comp148256_c0_seq1.mrna1;Target=comp148256_c0_seq1 1 24 +
ChrX	stalkie_big_nohaplotig	CDS	59535145	59535300	.	-	0	Parent=comp148256_c0_seq1.mrna1
ChrX	gffcl	locus	59536777	59537888	.	-	.	ID=RLOC_00003417;geneIDs=comp150314_c1_seq1.path1;transcripts=comp150314_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59536777	59537888	.	-	.	ID=comp150314_c1_seq1.mrna1;geneID=comp150314_c1_seq1.path1;Name=comp150314_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1107;mismatches=5;indels=6;unknowns=0;Target=comp150314_c1_seq1 1118 1 .;CDS_Target=comp150314_c1_seq1 939 787 .;locus=RLOC_00003417
ChrX	stalkie_big_nohaplotig	exon	59536777	59537888	99	-	.	Parent=comp150314_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59536956	59537108	.	-	0	Parent=comp150314_c1_seq1.mrna1
ChrX	gffcl	locus	59549435	59552811	.	-	.	ID=RLOC_00003418;geneIDs=FBgn0051800.1.path1;transcripts=FBgn0051800.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59549435	59552811	.	-	.	ID=FBgn0051800.1.mrna1;geneID=FBgn0051800.1.path1;Name=FBgn0051800.1;Dir=sensecoverage=100.0;identity=99.0;matches=615;mismatches=6;indels=0;unknowns=0;locus=RLOC_00003418
ChrX	stalkie_big_nohaplotig	exon	59549435	59549635	100	-	.	Parent=FBgn0051800.1.mrna1;Target=FBgn0051800.1 421 621 +
ChrX	stalkie_big_nohaplotig	exon	59552188	59552349	100	-	.	Parent=FBgn0051800.1.mrna1;Target=FBgn0051800.1 259 420 +
ChrX	stalkie_big_nohaplotig	exon	59552419	59552588	97	-	.	Parent=FBgn0051800.1.mrna1;Target=FBgn0051800.1 89 258 +
ChrX	stalkie_big_nohaplotig	exon	59552656	59552715	100	-	.	Parent=FBgn0051800.1.mrna1;Target=FBgn0051800.1 29 88 +
ChrX	stalkie_big_nohaplotig	exon	59552784	59552811	96	-	.	Parent=FBgn0051800.1.mrna1;Target=FBgn0051800.1 1 28 +
ChrX	stalkie_big_nohaplotig	CDS	59549435	59549635	.	-	0	Parent=FBgn0051800.1.mrna1;Target=FBgn0051800.1 421 621 +
ChrX	stalkie_big_nohaplotig	CDS	59552188	59552349	.	-	0	Parent=FBgn0051800.1.mrna1;Target=FBgn0051800.1 259 420 +
ChrX	stalkie_big_nohaplotig	CDS	59552419	59552588	.	-	2	Parent=FBgn0051800.1.mrna1;Target=FBgn0051800.1 89 258 +
ChrX	stalkie_big_nohaplotig	CDS	59552656	59552715	.	-	2	Parent=FBgn0051800.1.mrna1;Target=FBgn0051800.1 29 88 +
ChrX	stalkie_big_nohaplotig	CDS	59552784	59552811	.	-	0	Parent=FBgn0051800.1.mrna1;Target=FBgn0051800.1 1 28 +
ChrX	gffcl	locus	59554351	59557417	.	-	.	ID=RLOC_00003419;geneIDs=FBgn0027094.1.path1;transcripts=FBgn0027094.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59554351	59557417	.	-	.	ID=FBgn0027094.1.mrna1;geneID=FBgn0027094.1.path1;Name=FBgn0027094.1;Dir=sensecoverage=99.7;identity=100.0;matches=2915;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003419
ChrX	stalkie_big_nohaplotig	exon	59554351	59556256	100	-	.	Parent=FBgn0027094.1.mrna1;Target=FBgn0027094.1 1020 2925 +
ChrX	stalkie_big_nohaplotig	exon	59556409	59557417	100	-	.	Parent=FBgn0027094.1.mrna1;Target=FBgn0027094.1 11 1019 +
ChrX	stalkie_big_nohaplotig	CDS	59554351	59556256	.	-	1	Parent=FBgn0027094.1.mrna1;Target=FBgn0027094.1 1020 2925 +
ChrX	stalkie_big_nohaplotig	CDS	59556409	59557415	.	-	0	Parent=FBgn0027094.1.mrna1;Target=FBgn0027094.1 13 1019 +
ChrX	gffcl	locus	59560617	59562039	.	+	.	ID=RLOC_00003420;geneIDs=comp118943_c0_seq1.path1;transcripts=comp118943_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59560617	59562039	.	+	.	ID=comp118943_c0_seq1.mrna1;geneID=comp118943_c0_seq1.path1;Name=comp118943_c0_seq1;Dir=antisensecoverage=98.4;identity=98.2;matches=490;mismatches=8;indels=1;unknowns=0;Target=comp118943_c0_seq1 324 497 .;locus=RLOC_00003420
ChrX	stalkie_big_nohaplotig	exon	59560617	59560859	97	+	.	Parent=comp118943_c0_seq1.mrna1;Target=comp118943_c0_seq1 256 499 -
ChrX	stalkie_big_nohaplotig	exon	59561724	59561962	98	+	.	Parent=comp118943_c0_seq1.mrna1;Target=comp118943_c0_seq1 17 255 -
ChrX	stalkie_big_nohaplotig	exon	59562024	59562039	100	+	.	Parent=comp118943_c0_seq1.mrna1;Target=comp118943_c0_seq1 1 16 -
ChrX	stalkie_big_nohaplotig	CDS	59560619	59560791	.	+	0	Parent=comp118943_c0_seq1.mrna1
ChrX	gffcl	locus	59569209	59569516	.	-	.	ID=RLOC_00003421;geneIDs=FBgn0263852.1.path1;transcripts=FBgn0263852.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59569209	59569516	.	-	.	ID=FBgn0263852.1.mrna1;geneID=FBgn0263852.1.path1;Name=FBgn0263852.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=308;mismatches=0;indels=1;unknowns=0;Target=FBgn0263852.1 309 1 .;CDS_Target=FBgn0263852.1 92 3 .;locus=RLOC_00003421
ChrX	stalkie_big_nohaplotig	exon	59569209	59569516	99	-	.	Parent=FBgn0263852.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59569426	59569514	.	-	0	Parent=FBgn0263852.1.mrna1
ChrX	gffcl	locus	59587633	59594891	.	+	.	ID=RLOC_00003422;geneIDs=FBgn0032036.1.path1;transcripts=FBgn0032036.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59587633	59594891	.	+	.	ID=FBgn0032036.1.mrna1;geneID=FBgn0032036.1.path1;Name=FBgn0032036.1;Dir=sensecoverage=99.8;identity=100.0;matches=1449;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003422
ChrX	stalkie_big_nohaplotig	exon	59587633	59587783	100	+	.	Parent=FBgn0032036.1.mrna1;Target=FBgn0032036.1 4 154 +
ChrX	stalkie_big_nohaplotig	exon	59590383	59590728	100	+	.	Parent=FBgn0032036.1.mrna1;Target=FBgn0032036.1 155 500 +
ChrX	stalkie_big_nohaplotig	exon	59593806	59594342	100	+	.	Parent=FBgn0032036.1.mrna1;Target=FBgn0032036.1 501 1037 +
ChrX	stalkie_big_nohaplotig	exon	59594410	59594582	100	+	.	Parent=FBgn0032036.1.mrna1;Target=FBgn0032036.1 1038 1210 +
ChrX	stalkie_big_nohaplotig	exon	59594650	59594891	100	+	.	Parent=FBgn0032036.1.mrna1;Target=FBgn0032036.1 1211 1452 +
ChrX	stalkie_big_nohaplotig	CDS	59587633	59587783	.	+	0	Parent=FBgn0032036.1.mrna1;Target=FBgn0032036.1 4 154 +
ChrX	stalkie_big_nohaplotig	CDS	59590383	59590728	.	+	2	Parent=FBgn0032036.1.mrna1;Target=FBgn0032036.1 155 500 +
ChrX	stalkie_big_nohaplotig	CDS	59593806	59594342	.	+	1	Parent=FBgn0032036.1.mrna1;Target=FBgn0032036.1 501 1037 +
ChrX	stalkie_big_nohaplotig	CDS	59594410	59594582	.	+	1	Parent=FBgn0032036.1.mrna1;Target=FBgn0032036.1 1038 1210 +
ChrX	stalkie_big_nohaplotig	CDS	59594650	59594891	.	+	2	Parent=FBgn0032036.1.mrna1;Target=FBgn0032036.1 1211 1452 +
ChrX	gffcl	locus	59595155	59600945	.	+	.	ID=RLOC_00003423;geneIDs=comp163500_c0_seq1.path1;transcripts=comp163500_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59595155	59600945	.	+	.	ID=comp163500_c0_seq1.mrna1;geneID=comp163500_c0_seq1.path1;Name=comp163500_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=5787;mismatches=4;indels=1;unknowns=0;Target=comp163500_c0_seq1 5792 1 .;CDS_Target=comp163500_c0_seq1 3203 2922 .;locus=RLOC_00003423
ChrX	stalkie_big_nohaplotig	exon	59595155	59600945	99	+	.	Parent=comp163500_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59598076	59598357	.	+	0	Parent=comp163500_c0_seq1.mrna1
ChrX	gffcl	locus	59601617	59602166	.	-	.	ID=RLOC_00003424;geneIDs=comp151078_c0_seq1.path1;transcripts=comp151078_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59601617	59602166	.	-	.	ID=comp151078_c0_seq1.mrna1;geneID=comp151078_c0_seq1.path1;Name=comp151078_c0_seq1;Dir=indeterminatecoverage=94.7;identity=98.7;matches=546;mismatches=4;indels=3;unknowns=0;Target=comp151078_c0_seq1 584 32 .;CDS_Target=comp151078_c0_seq1 88 32 .;locus=RLOC_00003424
ChrX	stalkie_big_nohaplotig	exon	59601617	59602166	98	-	.	Parent=comp151078_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59602110	59602166	.	-	0	Parent=comp151078_c0_seq1.mrna1
ChrX	gffcl	locus	59614452	59632810	.	+	.	ID=RLOC_00003426;geneIDs=FBgn0020497.1.path1;transcripts=FBgn0020497.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59614452	59632810	.	+	.	ID=FBgn0020497.1.mrna1;geneID=FBgn0020497.1.path1;Name=FBgn0020497.1;Dir=sensecoverage=100.0;identity=100.0;matches=3207;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003426
ChrX	stalkie_big_nohaplotig	exon	59614452	59615961	100	+	.	Parent=FBgn0020497.1.mrna1;Target=FBgn0020497.1 1 1510 +
ChrX	stalkie_big_nohaplotig	exon	59624535	59624905	100	+	.	Parent=FBgn0020497.1.mrna1;Target=FBgn0020497.1 1511 1881 +
ChrX	stalkie_big_nohaplotig	exon	59624976	59625455	100	+	.	Parent=FBgn0020497.1.mrna1;Target=FBgn0020497.1 1882 2361 +
ChrX	stalkie_big_nohaplotig	exon	59625521	59625853	100	+	.	Parent=FBgn0020497.1.mrna1;Target=FBgn0020497.1 2362 2694 +
ChrX	stalkie_big_nohaplotig	exon	59625915	59626280	100	+	.	Parent=FBgn0020497.1.mrna1;Target=FBgn0020497.1 2695 3060 +
ChrX	stalkie_big_nohaplotig	exon	59632664	59632810	100	+	.	Parent=FBgn0020497.1.mrna1;Target=FBgn0020497.1 3061 3207 +
ChrX	stalkie_big_nohaplotig	CDS	59614452	59615961	.	+	0	Parent=FBgn0020497.1.mrna1;Target=FBgn0020497.1 1 1510 +
ChrX	stalkie_big_nohaplotig	CDS	59624535	59624905	.	+	2	Parent=FBgn0020497.1.mrna1;Target=FBgn0020497.1 1511 1881 +
ChrX	stalkie_big_nohaplotig	CDS	59624976	59625455	.	+	0	Parent=FBgn0020497.1.mrna1;Target=FBgn0020497.1 1882 2361 +
ChrX	stalkie_big_nohaplotig	CDS	59625521	59625853	.	+	0	Parent=FBgn0020497.1.mrna1;Target=FBgn0020497.1 2362 2694 +
ChrX	stalkie_big_nohaplotig	CDS	59625915	59626280	.	+	0	Parent=FBgn0020497.1.mrna1;Target=FBgn0020497.1 2695 3060 +
ChrX	stalkie_big_nohaplotig	CDS	59632664	59632810	.	+	0	Parent=FBgn0020497.1.mrna1;Target=FBgn0020497.1 3061 3207 +
ChrX	gffcl	locus	59635373	59636090	.	+	.	ID=RLOC_00003427;geneIDs=comp144211_c0_seq1.path1;transcripts=comp144211_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59635373	59636090	.	+	.	ID=comp144211_c0_seq1.mrna1;geneID=comp144211_c0_seq1.path1;Name=comp144211_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.3;matches=713;mismatches=5;indels=7;unknowns=0;Target=comp144211_c0_seq1 726 2 .;CDS_Target=comp144211_c0_seq1 361 221 .;locus=RLOC_00003427
ChrX	stalkie_big_nohaplotig	exon	59635373	59636090	98	+	.	Parent=comp144211_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59635585	59635725	.	+	0	Parent=comp144211_c0_seq1.mrna1
ChrX	gffcl	locus	59638109	59646196	.	-	.	ID=RLOC_00003428;geneIDs=FBgn0014417.1.path1;transcripts=FBgn0014417.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59638109	59646196	.	-	.	ID=FBgn0014417.1.mrna1;geneID=FBgn0014417.1.path1;Name=FBgn0014417.1;Dir=sensecoverage=100.0;identity=100.0;matches=2250;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003428
ChrX	stalkie_big_nohaplotig	exon	59638109	59639756	100	-	.	Parent=FBgn0014417.1.mrna1;Target=FBgn0014417.1 603 2250 +
ChrX	stalkie_big_nohaplotig	exon	59641898	59642295	100	-	.	Parent=FBgn0014417.1.mrna1;Target=FBgn0014417.1 205 602 +
ChrX	stalkie_big_nohaplotig	exon	59643607	59643758	100	-	.	Parent=FBgn0014417.1.mrna1;Target=FBgn0014417.1 53 204 +
ChrX	stalkie_big_nohaplotig	exon	59646145	59646196	100	-	.	Parent=FBgn0014417.1.mrna1;Target=FBgn0014417.1 1 52 +
ChrX	stalkie_big_nohaplotig	CDS	59638109	59639756	.	-	1	Parent=FBgn0014417.1.mrna1;Target=FBgn0014417.1 603 2250 +
ChrX	stalkie_big_nohaplotig	CDS	59641898	59642295	.	-	0	Parent=FBgn0014417.1.mrna1;Target=FBgn0014417.1 205 602 +
ChrX	stalkie_big_nohaplotig	CDS	59643607	59643758	.	-	2	Parent=FBgn0014417.1.mrna1;Target=FBgn0014417.1 53 204 +
ChrX	stalkie_big_nohaplotig	CDS	59646145	59646196	.	-	0	Parent=FBgn0014417.1.mrna1;Target=FBgn0014417.1 1 52 +
ChrX	gffcl	locus	59700784	59702825	.	-	.	ID=RLOC_00003430;geneIDs=comp162147_c3_seq1.path1;transcripts=comp162147_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59700784	59702825	.	-	.	ID=comp162147_c3_seq1.mrna1;geneID=comp162147_c3_seq1.path1;Name=comp162147_c3_seq1;Dir=indeterminatecoverage=97.6;identity=99.9;matches=2039;mismatches=3;indels=0;unknowns=0;Target=comp162147_c3_seq1 2043 2 .;CDS_Target=comp162147_c3_seq1 1373 1248 .;locus=RLOC_00003430
ChrX	stalkie_big_nohaplotig	exon	59700784	59702825	99	-	.	Parent=comp162147_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59701454	59701579	.	-	0	Parent=comp162147_c3_seq1.mrna1
ChrX	gffcl	locus	59720749	59721628	.	+	.	ID=RLOC_00003431;geneIDs=comp157268_c3_seq1.path1;transcripts=comp157268_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59720749	59721628	.	+	.	ID=comp157268_c3_seq1.mrna1;geneID=comp157268_c3_seq1.path1;Name=comp157268_c3_seq1;Dir=indeterminatecoverage=56.9;identity=99.0;matches=871;mismatches=9;indels=0;unknowns=0;Target=comp157268_c3_seq1 1546 667 .;CDS_Target=comp157268_c3_seq1 1520 963 .;locus=RLOC_00003431
ChrX	stalkie_big_nohaplotig	exon	59720749	59721628	98	+	.	Parent=comp157268_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59721045	59721602	.	+	0	Parent=comp157268_c3_seq1.mrna1
ChrX	gffcl	locus	59740221	59740485	.	-	.	ID=RLOC_00003432;geneIDs=comp82644_c0_seq1.path1;transcripts=comp82644_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59740221	59740485	.	-	.	ID=comp82644_c0_seq1.mrna1;geneID=comp82644_c0_seq1.path1;Name=comp82644_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=265;mismatches=0;indels=0;unknowns=0;Target=comp82644_c0_seq1 265 1 .;CDS_Target=comp82644_c0_seq1 178 47 .;locus=RLOC_00003432
ChrX	stalkie_big_nohaplotig	exon	59740221	59740485	100	-	.	Parent=comp82644_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59740308	59740439	.	-	0	Parent=comp82644_c0_seq1.mrna1
ChrX	gffcl	locus	59742206	59743124	.	-	.	ID=RLOC_00003433;geneIDs=comp153480_c0_seq1.path1;transcripts=comp153480_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59742206	59743124	.	-	.	ID=comp153480_c0_seq1.mrna1;geneID=comp153480_c0_seq1.path1;Name=comp153480_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=919;mismatches=0;indels=0;unknowns=0;Target=comp153480_c0_seq1 919 1 .;CDS_Target=comp153480_c0_seq1 676 527 .;locus=RLOC_00003433
ChrX	stalkie_big_nohaplotig	exon	59742206	59743124	100	-	.	Parent=comp153480_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59742449	59742598	.	-	0	Parent=comp153480_c0_seq1.mrna1
ChrX	gffcl	locus	59744717	59744983	.	+	.	ID=RLOC_00003434;geneIDs=comp428318_c0_seq1.path1;transcripts=comp428318_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59744717	59744983	.	+	.	ID=comp428318_c0_seq1.mrna1;geneID=comp428318_c0_seq1.path1;Name=comp428318_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=265;mismatches=2;indels=0;unknowns=0;Target=comp428318_c0_seq1 267 1 .;CDS_Target=comp428318_c0_seq1 86 3 .;locus=RLOC_00003434
ChrX	stalkie_big_nohaplotig	exon	59744717	59744983	99	+	.	Parent=comp428318_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59744719	59744802	.	+	0	Parent=comp428318_c0_seq1.mrna1
ChrX	gffcl	locus	59745128	59745613	.	-	.	ID=RLOC_00003435;geneIDs=comp117664_c0_seq1.path1;transcripts=comp117664_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59745128	59745613	.	-	.	ID=comp117664_c0_seq1.mrna1;geneID=comp117664_c0_seq1.path1;Name=comp117664_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.2;matches=483;mismatches=3;indels=1;unknowns=0;Target=comp117664_c0_seq1 487 1 .;CDS_Target=comp117664_c0_seq1 309 154 .;locus=RLOC_00003435
ChrX	stalkie_big_nohaplotig	exon	59745128	59745613	99	-	.	Parent=comp117664_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59745306	59745460	.	-	0	Parent=comp117664_c0_seq1.mrna1
ChrX	gffcl	locus	59749513	59751003	.	-	.	ID=RLOC_00003436;geneIDs=FBgn0032042.1.path1;transcripts=FBgn0032042.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59749513	59751003	.	-	.	ID=FBgn0032042.1.mrna1;geneID=FBgn0032042.1.path1;Name=FBgn0032042.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1491;mismatches=0;indels=0;unknowns=0;Target=FBgn0032042.1 1491 1 .;locus=RLOC_00003436
ChrX	stalkie_big_nohaplotig	exon	59749513	59751003	100	-	.	Parent=FBgn0032042.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59749513	59751003	.	-	0	Parent=FBgn0032042.1.mrna1
ChrX	gffcl	locus	59759444	59760192	.	-	.	ID=RLOC_00003437;geneIDs=comp144180_c0_seq1.path1;transcripts=comp144180_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59759444	59760192	.	-	.	ID=comp144180_c0_seq1.mrna1;geneID=comp144180_c0_seq1.path1;Name=comp144180_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=746;mismatches=3;indels=0;unknowns=0;Target=comp144180_c0_seq1 749 1 .;CDS_Target=comp144180_c0_seq1 595 482 .;locus=RLOC_00003437
ChrX	stalkie_big_nohaplotig	exon	59759444	59760192	99	-	.	Parent=comp144180_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59759598	59759711	.	-	0	Parent=comp144180_c0_seq1.mrna1
ChrX	gffcl	locus	59816832	59822252	.	+	.	ID=RLOC_00003438;geneIDs=comp113328_c0_seq1.path1;transcripts=comp113328_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59816832	59822252	.	+	.	ID=comp113328_c0_seq1.mrna1;geneID=comp113328_c0_seq1.path1;Name=comp113328_c0_seq1;Dir=sensecoverage=89.2;identity=98.9;matches=188;mismatches=2;indels=0;unknowns=0;Target=comp113328_c0_seq1 19 147 +;locus=RLOC_00003438
ChrX	stalkie_big_nohaplotig	exon	59816832	59817005	98	+	.	Parent=comp113328_c0_seq1.mrna1;Target=comp113328_c0_seq1 18 191 +
ChrX	stalkie_big_nohaplotig	exon	59822237	59822252	100	+	.	Parent=comp113328_c0_seq1.mrna1;Target=comp113328_c0_seq1 192 207 +
ChrX	stalkie_big_nohaplotig	CDS	59816833	59816961	.	+	0	Parent=comp113328_c0_seq1.mrna1
ChrX	gffcl	locus	59844743	59853442	.	+	.	ID=RLOC_00003439;geneIDs=comp135237_c0_seq1.path1;transcripts=comp135237_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59844743	59853442	.	+	.	ID=comp135237_c0_seq1.mrna1;geneID=comp135237_c0_seq1.path1;Name=comp135237_c0_seq1;Dir=antisensecoverage=89.6;identity=100.0;matches=3019;mismatches=0;indels=1;unknowns=0;locus=RLOC_00003439
ChrX	stalkie_big_nohaplotig	exon	59844743	59844903	100	+	.	Parent=comp135237_c0_seq1.mrna1;Target=comp135237_c0_seq1 2879 3039 -
ChrX	stalkie_big_nohaplotig	exon	59846775	59847128	99	+	.	Parent=comp135237_c0_seq1.mrna1;Target=comp135237_c0_seq1 2524 2878 -
ChrX	stalkie_big_nohaplotig	exon	59847232	59849442	100	+	.	Parent=comp135237_c0_seq1.mrna1;Target=comp135237_c0_seq1 313 2523 -
ChrX	stalkie_big_nohaplotig	exon	59853150	59853442	100	+	.	Parent=comp135237_c0_seq1.mrna1;Target=comp135237_c0_seq1 20 312 -
ChrX	stalkie_big_nohaplotig	CDS	59844745	59844903	.	+	0	Parent=comp135237_c0_seq1.mrna1;Target=comp135237_c0_seq1 2879 3037 .
ChrX	stalkie_big_nohaplotig	CDS	59846775	59847019	.	+	0	Parent=comp135237_c0_seq1.mrna1;Target=comp135237_c0_seq1 2633 2878 .
ChrX	gffcl	locus	59851899	59852932	.	-	.	ID=RLOC_00003440;geneIDs=comp112813_c0_seq1.path1;transcripts=comp112813_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59851899	59852932	.	-	.	ID=comp112813_c0_seq1.mrna1;geneID=comp112813_c0_seq1.path1;Name=comp112813_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1034;mismatches=0;indels=1;unknowns=0;Target=comp112813_c0_seq1 1035 1 .;CDS_Target=comp112813_c0_seq1 400 236 .;locus=RLOC_00003440
ChrX	stalkie_big_nohaplotig	exon	59851899	59852932	99	-	.	Parent=comp112813_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59852533	59852697	.	-	0	Parent=comp112813_c0_seq1.mrna1
ChrX	gffcl	locus	59858147	59861473	.	+	.	ID=RLOC_00003441;geneIDs=comp151320_c0_seq1.path1;transcripts=comp151320_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59858147	59861473	.	+	.	ID=comp151320_c0_seq1.mrna1;geneID=comp151320_c0_seq1.path1;Name=comp151320_c0_seq1;Dir=indeterminatecoverage=99.5;identity=97.6;matches=3278;mismatches=1;indels=81;unknowns=0;Target=comp151320_c0_seq1 3314 3 .;CDS_Target=comp151320_c0_seq1 1451 1428 .;locus=RLOC_00003441
ChrX	stalkie_big_nohaplotig	exon	59858147	59861473	97	+	.	Parent=comp151320_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59859620	59859631	.	+	0	Parent=comp151320_c0_seq1.mrna1
ChrX	gffcl	locus	59862597	60021054	.	-	.	ID=RLOC_00003442;geneIDs=FBgn0262872.1.path1,comp136838_c0_seq1.path1,comp153969_c0_seq1.path1,comp162033_c6_seq1.path1,comp162033_c6_seq1.path2;transcripts=comp162033_c6_seq1.mrna2,FBgn0262872.1.mrna1,comp153969_c0_seq1.mrna1,comp136838_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59862597	60021054	.	-	.	ID=comp162033_c6_seq1.mrna2;geneID=comp162033_c6_seq1.path2;Name=comp162033_c6_seq1;Dir=sensecoverage=57.8;identity=97.0;matches=3885;mismatches=81;indels=38;unknowns=0;locus=RLOC_00003442
ChrX	stalkie_big_nohaplotig	exon	59862597	59863161	100	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 6582 7146 +
ChrX	stalkie_big_nohaplotig	exon	59863920	59864098	100	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 6403 6581 +
ChrX	stalkie_big_nohaplotig	exon	59864161	59865721	100	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 4842 6402 +
ChrX	stalkie_big_nohaplotig	exon	59865793	59866071	100	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 4563 4841 +
ChrX	stalkie_big_nohaplotig	exon	59883831	59884832	100	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3561 4562 +
ChrX	stalkie_big_nohaplotig	exon	59891017	59891044	40	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3534 3560 +
ChrX	stalkie_big_nohaplotig	exon	59896041	59896050	100	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3455 3464 +
ChrX	stalkie_big_nohaplotig	exon	59896708	59896724	76	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3438 3454 +
ChrX	stalkie_big_nohaplotig	exon	59899352	59899420	55	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3374 3437 +
ChrX	stalkie_big_nohaplotig	exon	59906509	59906537	58	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3347 3373 +
ChrX	stalkie_big_nohaplotig	exon	59920706	59920726	80	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3329 3346 +
ChrX	stalkie_big_nohaplotig	exon	59923469	59923475	100	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3322 3328 +
ChrX	stalkie_big_nohaplotig	exon	59924186	59924187	100	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3320 3321 +
ChrX	stalkie_big_nohaplotig	exon	59924259	59924264	100	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3314 3319 +
ChrX	stalkie_big_nohaplotig	exon	59926217	59926225	100	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3305 3313 +
ChrX	stalkie_big_nohaplotig	exon	59928061	59928079	78	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3288 3304 +
ChrX	stalkie_big_nohaplotig	exon	59930380	59930386	100	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3281 3287 +
ChrX	stalkie_big_nohaplotig	exon	59933268	59933287	58	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3250 3280 +
ChrX	stalkie_big_nohaplotig	exon	59938768	59938770	100	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3247 3249 +
ChrX	stalkie_big_nohaplotig	exon	59945320	59945333	78	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3233 3246 +
ChrX	stalkie_big_nohaplotig	exon	59945336	59945344	100	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3194 3202 +
ChrX	stalkie_big_nohaplotig	exon	59950705	59950710	100	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3158 3163 +
ChrX	stalkie_big_nohaplotig	exon	59953375	59953380	100	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3152 3157 +
ChrX	stalkie_big_nohaplotig	exon	59958571	59958582	83	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3140 3151 +
ChrX	stalkie_big_nohaplotig	exon	59962113	59962118	100	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3134 3139 +
ChrX	stalkie_big_nohaplotig	exon	59967016	59967021	100	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3128 3133 +
ChrX	stalkie_big_nohaplotig	exon	59982046	59982056	100	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3095 3105 +
ChrX	stalkie_big_nohaplotig	exon	59988351	59988399	46	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3050 3094 +
ChrX	stalkie_big_nohaplotig	exon	59995024	59995034	90	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3039 3049 +
ChrX	stalkie_big_nohaplotig	exon	60006030	60006032	100	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3036 3038 +
ChrX	stalkie_big_nohaplotig	exon	60013898	60013906	100	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3027 3035 +
ChrX	stalkie_big_nohaplotig	exon	60018848	60018854	100	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3020 3026 +
ChrX	stalkie_big_nohaplotig	exon	60021051	60021054	100	-	.	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3016 3019 +
ChrX	stalkie_big_nohaplotig	CDS	59862599	59863161	.	-	2	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 6582 7144 +
ChrX	stalkie_big_nohaplotig	CDS	59863920	59864098	.	-	1	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 6403 6581 +
ChrX	stalkie_big_nohaplotig	CDS	59864161	59865721	.	-	2	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 4842 6402 +
ChrX	stalkie_big_nohaplotig	CDS	59865793	59866071	.	-	2	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 4563 4841 +
ChrX	stalkie_big_nohaplotig	CDS	59883831	59884764	.	-	0	Parent=comp162033_c6_seq1.mrna2;Target=comp162033_c6_seq1 3629 4562 +
ChrX	stalkie_big_nohaplotig	mRNA	59862599	59905929	.	-	.	ID=FBgn0262872.1.mrna1;geneID=FBgn0262872.1.path1;Name=FBgn0262872.1;Dir=sensecoverage=99.9;identity=100.0;matches=2971;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003442
ChrX	stalkie_big_nohaplotig	exon	59862599	59863161	100	-	.	Parent=FBgn0262872.1.mrna1;Target=FBgn0262872.1 2411 2973 +
ChrX	stalkie_big_nohaplotig	exon	59863920	59864098	100	-	.	Parent=FBgn0262872.1.mrna1;Target=FBgn0262872.1 2232 2410 +
ChrX	stalkie_big_nohaplotig	exon	59864161	59865721	100	-	.	Parent=FBgn0262872.1.mrna1;Target=FBgn0262872.1 671 2231 +
ChrX	stalkie_big_nohaplotig	exon	59865793	59866071	100	-	.	Parent=FBgn0262872.1.mrna1;Target=FBgn0262872.1 392 670 +
ChrX	stalkie_big_nohaplotig	exon	59905474	59905683	100	-	.	Parent=FBgn0262872.1.mrna1;Target=FBgn0262872.1 182 391 +
ChrX	stalkie_big_nohaplotig	exon	59905751	59905929	100	-	.	Parent=FBgn0262872.1.mrna1;Target=FBgn0262872.1 3 181 +
ChrX	stalkie_big_nohaplotig	CDS	59862599	59863161	.	-	2	Parent=FBgn0262872.1.mrna1;Target=FBgn0262872.1 2411 2973 +
ChrX	stalkie_big_nohaplotig	CDS	59863920	59864098	.	-	1	Parent=FBgn0262872.1.mrna1;Target=FBgn0262872.1 2232 2410 +
ChrX	stalkie_big_nohaplotig	CDS	59864161	59865721	.	-	2	Parent=FBgn0262872.1.mrna1;Target=FBgn0262872.1 671 2231 +
ChrX	stalkie_big_nohaplotig	CDS	59865793	59866071	.	-	2	Parent=FBgn0262872.1.mrna1;Target=FBgn0262872.1 392 670 +
ChrX	stalkie_big_nohaplotig	CDS	59905474	59905683	.	-	2	Parent=FBgn0262872.1.mrna1;Target=FBgn0262872.1 182 391 +
ChrX	stalkie_big_nohaplotig	CDS	59905751	59905928	.	-	0	Parent=FBgn0262872.1.mrna1;Target=FBgn0262872.1 4 181 +
ChrX	stalkie_big_nohaplotig	mRNA	59950210	59952181	.	-	.	ID=comp153969_c0_seq1.mrna1;geneID=comp153969_c0_seq1.path1;Name=comp153969_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1970;mismatches=2;indels=1;unknowns=0;Target=comp153969_c0_seq1 1973 1 .;CDS_Target=comp153969_c0_seq1 792 658 .;locus=RLOC_00003442
ChrX	stalkie_big_nohaplotig	exon	59950210	59952181	99	-	.	Parent=comp153969_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59951391	59951525	.	-	0	Parent=comp153969_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59966465	59967171	.	-	.	ID=comp136838_c0_seq1.mrna1;geneID=comp136838_c0_seq1.path1;Name=comp136838_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=706;mismatches=1;indels=0;unknowns=0;Target=comp136838_c0_seq1 707 1 .;CDS_Target=comp136838_c0_seq1 580 491 .;locus=RLOC_00003442
ChrX	stalkie_big_nohaplotig	exon	59966465	59967171	99	-	.	Parent=comp136838_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59966592	59966681	.	-	0	Parent=comp136838_c0_seq1.mrna1
ChrX	gffcl	locus	59938884	61676676	.	.	.	ID=RLOC_00003443;geneIDs=FBgn0031883.1.path1,comp140897_c0_seq1.path1,comp141782_c0_seq1.path1,comp146500_c1_seq1.path1,comp153379_c1_seq1.path1,comp156394_c0_seq1.path1;transcripts=comp153379_c1_seq1.mrna1,FBgn0031883.1.mrna1,comp141782_c0_seq1.mrna1,comp146500_c1_seq1.mrna1,comp156394_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59938884	60125449	.	-	.	ID=comp153379_c1_seq1.mrna1;geneID=comp153379_c1_seq1.path1;Name=comp153379_c1_seq1;Dir=sensecoverage=58.5;identity=97.1;matches=4197;mismatches=42;indels=85;unknowns=0;locus=RLOC_00003443
ChrX	stalkie_big_nohaplotig	exon	59938884	59940000	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 6564 7680 +
ChrX	stalkie_big_nohaplotig	exon	59940057	59940606	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 6014 6563 +
ChrX	stalkie_big_nohaplotig	exon	59940675	59940719	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 5969 6013 +
ChrX	stalkie_big_nohaplotig	exon	59941760	59942407	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 5321 5968 +
ChrX	stalkie_big_nohaplotig	exon	59943417	59943965	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 4772 5320 +
ChrX	stalkie_big_nohaplotig	exon	59944226	59945187	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3810 4771 +
ChrX	stalkie_big_nohaplotig	exon	59949406	59949412	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3803 3809 +
ChrX	stalkie_big_nohaplotig	exon	59955780	59955784	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3798 3802 +
ChrX	stalkie_big_nohaplotig	exon	59960196	59960199	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3794 3797 +
ChrX	stalkie_big_nohaplotig	exon	59976325	59976336	91	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3743 3754 +
ChrX	stalkie_big_nohaplotig	exon	59981925	59981938	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3729 3742 +
ChrX	stalkie_big_nohaplotig	exon	59981982	59981989	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3666 3673 +
ChrX	stalkie_big_nohaplotig	exon	59982088	59982098	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3646 3656 +
ChrX	stalkie_big_nohaplotig	exon	59986655	59986664	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3601 3610 +
ChrX	stalkie_big_nohaplotig	exon	59987206	59987214	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3592 3600 +
ChrX	stalkie_big_nohaplotig	exon	59989442	59989448	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3585 3591 +
ChrX	stalkie_big_nohaplotig	exon	59996109	59996111	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3582 3584 +
ChrX	stalkie_big_nohaplotig	exon	60002966	60002974	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3573 3581 +
ChrX	stalkie_big_nohaplotig	exon	60018241	60018249	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3564 3572 +
ChrX	stalkie_big_nohaplotig	exon	60019200	60019209	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3554 3563 +
ChrX	stalkie_big_nohaplotig	exon	60022561	60022564	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3550 3553 +
ChrX	stalkie_big_nohaplotig	exon	60024179	60024222	55	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3503 3549 +
ChrX	stalkie_big_nohaplotig	exon	60032101	60032105	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3498 3502 +
ChrX	stalkie_big_nohaplotig	exon	60038110	60038112	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3495 3497 +
ChrX	stalkie_big_nohaplotig	exon	60038220	60038226	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3488 3494 +
ChrX	stalkie_big_nohaplotig	exon	60040568	60040578	90	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3477 3487 +
ChrX	stalkie_big_nohaplotig	exon	60050425	60050431	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3470 3476 +
ChrX	stalkie_big_nohaplotig	exon	60054125	60054134	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3460 3469 +
ChrX	stalkie_big_nohaplotig	exon	60055616	60055627	83	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3449 3459 +
ChrX	stalkie_big_nohaplotig	exon	60056148	60056156	88	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3440 3448 +
ChrX	stalkie_big_nohaplotig	exon	60057732	60057738	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3433 3439 +
ChrX	stalkie_big_nohaplotig	exon	60091052	60091063	91	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3421 3432 +
ChrX	stalkie_big_nohaplotig	exon	60106772	60106783	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3383 3394 +
ChrX	stalkie_big_nohaplotig	exon	60112992	60113003	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3304 3315 +
ChrX	stalkie_big_nohaplotig	exon	60120960	60120965	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3298 3303 +
ChrX	stalkie_big_nohaplotig	exon	60121865	60121867	100	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3295 3297 +
ChrX	stalkie_big_nohaplotig	exon	60124938	60124978	58	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3222 3256 +
ChrX	stalkie_big_nohaplotig	exon	60125110	60125124	86	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3207 3221 +
ChrX	stalkie_big_nohaplotig	exon	60125343	60125449	24	-	.	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 3175 3206 +
ChrX	stalkie_big_nohaplotig	CDS	59939365	59940000	.	-	0	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 6564 7199 +
ChrX	stalkie_big_nohaplotig	CDS	59940057	59940479	.	-	0	Parent=comp153379_c1_seq1.mrna1;Target=comp153379_c1_seq1 6141 6563 +
ChrX	stalkie_big_nohaplotig	mRNA	59939368	59944334	.	-	.	ID=FBgn0031883.1.mrna1;geneID=FBgn0031883.1.path1;Name=FBgn0031883.1;Dir=sensecoverage=100.0;identity=99.9;matches=2028;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003443
ChrX	stalkie_big_nohaplotig	exon	59939368	59940000	100	-	.	Parent=FBgn0031883.1.mrna1;Target=FBgn0031883.1 1399 2031 +
ChrX	stalkie_big_nohaplotig	exon	59940057	59940606	100	-	.	Parent=FBgn0031883.1.mrna1;Target=FBgn0031883.1 849 1398 +
ChrX	stalkie_big_nohaplotig	exon	59940675	59940719	100	-	.	Parent=FBgn0031883.1.mrna1;Target=FBgn0031883.1 804 848 +
ChrX	stalkie_big_nohaplotig	exon	59941760	59942407	100	-	.	Parent=FBgn0031883.1.mrna1;Target=FBgn0031883.1 156 803 +
ChrX	stalkie_big_nohaplotig	exon	59943417	59943539	98	-	.	Parent=FBgn0031883.1.mrna1;Target=FBgn0031883.1 33 155 +
ChrX	stalkie_big_nohaplotig	exon	59944303	59944334	96	-	.	Parent=FBgn0031883.1.mrna1;Target=FBgn0031883.1 1 32 +
ChrX	stalkie_big_nohaplotig	CDS	59939368	59940000	.	-	0	Parent=FBgn0031883.1.mrna1;Target=FBgn0031883.1 1399 2031 +
ChrX	stalkie_big_nohaplotig	CDS	59940057	59940479	.	-	0	Parent=FBgn0031883.1.mrna1;Target=FBgn0031883.1 976 1398 +
ChrX	stalkie_big_nohaplotig	mRNA	59940787	59941783	.	+	.	ID=comp141782_c0_seq1.mrna1;geneID=comp141782_c0_seq1.path1;Name=comp141782_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=997;mismatches=0;indels=0;unknowns=0;Target=comp141782_c0_seq1 997 1 .;CDS_Target=comp141782_c0_seq1 429 328 .;locus=RLOC_00003443
ChrX	stalkie_big_nohaplotig	exon	59940787	59941783	100	+	.	Parent=comp141782_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59941114	59941215	.	+	0	Parent=comp141782_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60040535	61676676	.	-	.	ID=comp146500_c1_seq1.mrna1;geneID=comp146500_c1_seq1.path1;Name=comp146500_c1_seq1;Dir=antisensecoverage=86.8;identity=96.6;matches=481;mismatches=17;indels=0;unknowns=0;locus=RLOC_00003443
ChrX	stalkie_big_nohaplotig	exon	60040535	60040986	96	-	.	Parent=comp146500_c1_seq1.mrna1;Target=comp146500_c1_seq1 1 452 -
ChrX	stalkie_big_nohaplotig	exon	61605267	61605271	100	-	.	Parent=comp146500_c1_seq1.mrna1;Target=comp146500_c1_seq1 453 457 -
ChrX	stalkie_big_nohaplotig	exon	61612611	61612613	100	-	.	Parent=comp146500_c1_seq1.mrna1;Target=comp146500_c1_seq1 458 460 -
ChrX	stalkie_big_nohaplotig	exon	61619299	61619303	100	-	.	Parent=comp146500_c1_seq1.mrna1;Target=comp146500_c1_seq1 461 465 -
ChrX	stalkie_big_nohaplotig	exon	61633804	61633809	100	-	.	Parent=comp146500_c1_seq1.mrna1;Target=comp146500_c1_seq1 466 471 -
ChrX	stalkie_big_nohaplotig	exon	61634730	61634731	100	-	.	Parent=comp146500_c1_seq1.mrna1;Target=comp146500_c1_seq1 472 473 -
ChrX	stalkie_big_nohaplotig	exon	61654563	61654564	100	-	.	Parent=comp146500_c1_seq1.mrna1;Target=comp146500_c1_seq1 474 475 -
ChrX	stalkie_big_nohaplotig	exon	61657890	61657895	100	-	.	Parent=comp146500_c1_seq1.mrna1;Target=comp146500_c1_seq1 476 481 -
ChrX	stalkie_big_nohaplotig	exon	61661537	61661546	90	-	.	Parent=comp146500_c1_seq1.mrna1;Target=comp146500_c1_seq1 482 491 -
ChrX	stalkie_big_nohaplotig	exon	61676670	61676676	100	-	.	Parent=comp146500_c1_seq1.mrna1;Target=comp146500_c1_seq1 492 498 -
ChrX	stalkie_big_nohaplotig	CDS	60040928	60040986	.	-	2	Parent=comp146500_c1_seq1.mrna1;Target=comp146500_c1_seq1 394 452 .
ChrX	stalkie_big_nohaplotig	CDS	61605267	61605271	.	-	1	Parent=comp146500_c1_seq1.mrna1;Target=comp146500_c1_seq1 453 457 .
ChrX	stalkie_big_nohaplotig	CDS	61612611	61612613	.	-	1	Parent=comp146500_c1_seq1.mrna1;Target=comp146500_c1_seq1 458 460 .
ChrX	stalkie_big_nohaplotig	CDS	61619299	61619303	.	-	0	Parent=comp146500_c1_seq1.mrna1;Target=comp146500_c1_seq1 461 465 .
ChrX	stalkie_big_nohaplotig	CDS	61633804	61633809	.	-	0	Parent=comp146500_c1_seq1.mrna1;Target=comp146500_c1_seq1 466 471 .
ChrX	stalkie_big_nohaplotig	CDS	61634730	61634731	.	-	2	Parent=comp146500_c1_seq1.mrna1;Target=comp146500_c1_seq1 472 473 .
ChrX	stalkie_big_nohaplotig	CDS	61654563	61654564	.	-	1	Parent=comp146500_c1_seq1.mrna1;Target=comp146500_c1_seq1 474 475 .
ChrX	stalkie_big_nohaplotig	CDS	61657890	61657895	.	-	1	Parent=comp146500_c1_seq1.mrna1;Target=comp146500_c1_seq1 476 481 .
ChrX	stalkie_big_nohaplotig	CDS	61661537	61661546	.	-	2	Parent=comp146500_c1_seq1.mrna1;Target=comp146500_c1_seq1 482 491 .
ChrX	stalkie_big_nohaplotig	CDS	61676670	61676676	.	-	0	Parent=comp146500_c1_seq1.mrna1;Target=comp146500_c1_seq1 492 498 .
ChrX	stalkie_big_nohaplotig	mRNA	61633624	61634629	.	-	.	ID=comp156394_c0_seq1.mrna1;geneID=comp156394_c0_seq1.path1;Name=comp156394_c0_seq1;Dir=indeterminatecoverage=98.0;identity=99.7;matches=1003;mismatches=3;indels=0;unknowns=0;Target=comp156394_c0_seq1 1027 22 .;CDS_Target=comp156394_c0_seq1 705 508 .;locus=RLOC_00003443
ChrX	stalkie_big_nohaplotig	exon	61633624	61634629	99	-	.	Parent=comp156394_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61633946	61634143	.	-	0	Parent=comp156394_c0_seq1.mrna1
ChrX	gffcl	locus	59946928	59947694	.	+	.	ID=RLOC_00003444;geneIDs=comp150020_c0_seq1.path1;transcripts=comp150020_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59946928	59947694	.	+	.	ID=comp150020_c0_seq1.mrna1;geneID=comp150020_c0_seq1.path1;Name=comp150020_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=767;mismatches=0;indels=0;unknowns=0;Target=comp150020_c0_seq1 767 1 .;CDS_Target=comp150020_c0_seq1 82 2 .;locus=RLOC_00003444
ChrX	stalkie_big_nohaplotig	exon	59946928	59947694	100	+	.	Parent=comp150020_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59946929	59947009	.	+	0	Parent=comp150020_c0_seq1.mrna1
ChrX	gffcl	locus	59952417	59953210	.	+	.	ID=RLOC_00003445;geneIDs=comp119154_c0_seq1.path1;transcripts=comp119154_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59952417	59953210	.	+	.	ID=comp119154_c0_seq1.mrna1;geneID=comp119154_c0_seq1.path1;Name=comp119154_c0_seq1;Dir=indeterminatecoverage=96.1;identity=99.6;matches=791;mismatches=3;indels=0;unknowns=0;Target=comp119154_c0_seq1 794 1 .;CDS_Target=comp119154_c0_seq1 433 329 .;locus=RLOC_00003445
ChrX	stalkie_big_nohaplotig	exon	59952417	59953210	99	+	.	Parent=comp119154_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59952745	59952849	.	+	0	Parent=comp119154_c0_seq1.mrna1
ChrX	gffcl	locus	59954257	59955309	.	+	.	ID=RLOC_00003446;geneIDs=comp157792_c2_seq1.path1;transcripts=comp157792_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59954257	59955309	.	+	.	ID=comp157792_c2_seq1.mrna1;geneID=comp157792_c2_seq1.path1;Name=comp157792_c2_seq1;Dir=indeterminatecoverage=99.8;identity=99.2;matches=1051;mismatches=2;indels=6;unknowns=0;Target=comp157792_c2_seq1 1059 1 .;CDS_Target=comp157792_c2_seq1 1059 904 .;locus=RLOC_00003446
ChrX	stalkie_big_nohaplotig	exon	59954257	59955309	99	+	.	Parent=comp157792_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	59955154	59955309	.	+	0	Parent=comp157792_c2_seq1.mrna1
ChrX	gffcl	locus	59959742	59960574	.	+	.	ID=RLOC_00003447;geneIDs=FBgn0031882.1.path1;transcripts=FBgn0031882.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59959742	59960574	.	+	.	ID=FBgn0031882.1.mrna1;geneID=FBgn0031882.1.path1;Name=FBgn0031882.1;Dir=sensecoverage=100.0;identity=100.0;matches=696;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003447
ChrX	stalkie_big_nohaplotig	exon	59959742	59959766	100	+	.	Parent=FBgn0031882.1.mrna1;Target=FBgn0031882.1 1 25 +
ChrX	stalkie_big_nohaplotig	exon	59959836	59960029	100	+	.	Parent=FBgn0031882.1.mrna1;Target=FBgn0031882.1 26 219 +
ChrX	stalkie_big_nohaplotig	exon	59960098	59960574	100	+	.	Parent=FBgn0031882.1.mrna1;Target=FBgn0031882.1 220 696 +
ChrX	stalkie_big_nohaplotig	CDS	59959742	59959766	.	+	0	Parent=FBgn0031882.1.mrna1;Target=FBgn0031882.1 1 25 +
ChrX	stalkie_big_nohaplotig	CDS	59959836	59960029	.	+	2	Parent=FBgn0031882.1.mrna1;Target=FBgn0031882.1 26 219 +
ChrX	stalkie_big_nohaplotig	CDS	59960098	59960574	.	+	0	Parent=FBgn0031882.1.mrna1;Target=FBgn0031882.1 220 696 +
ChrX	gffcl	locus	59965961	59967911	.	-	.	ID=RLOC_00003448;geneIDs=FBgn0031504.1.path1;transcripts=FBgn0031504.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59965961	59967911	.	-	.	ID=FBgn0031504.1.mrna1;geneID=FBgn0031504.1.path1;Name=FBgn0031504.1;Dir=sensecoverage=100.0;identity=100.0;matches=438;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003448
ChrX	stalkie_big_nohaplotig	exon	59965961	59966192	100	-	.	Parent=FBgn0031504.1.mrna1;Target=FBgn0031504.1 207 438 +
ChrX	stalkie_big_nohaplotig	exon	59967706	59967911	100	-	.	Parent=FBgn0031504.1.mrna1;Target=FBgn0031504.1 1 206 +
ChrX	stalkie_big_nohaplotig	CDS	59965961	59966192	.	-	1	Parent=FBgn0031504.1.mrna1;Target=FBgn0031504.1 207 438 +
ChrX	stalkie_big_nohaplotig	CDS	59967706	59967911	.	-	0	Parent=FBgn0031504.1.mrna1;Target=FBgn0031504.1 1 206 +
ChrX	gffcl	locus	59970732	59976890	.	-	.	ID=RLOC_00003449;geneIDs=FBgn0039970.1.path1;transcripts=FBgn0039970.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59970732	59976890	.	-	.	ID=FBgn0039970.1.mrna1;geneID=FBgn0039970.1.path1;Name=FBgn0039970.1;Dir=sensecoverage=99.2;identity=100.0;matches=598;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003449
ChrX	stalkie_big_nohaplotig	exon	59970732	59971211	100	-	.	Parent=FBgn0039970.1.mrna1;Target=FBgn0039970.1 119 598 +
ChrX	stalkie_big_nohaplotig	exon	59976773	59976890	100	-	.	Parent=FBgn0039970.1.mrna1;Target=FBgn0039970.1 1 118 +
ChrX	stalkie_big_nohaplotig	CDS	59970733	59971211	.	-	2	Parent=FBgn0039970.1.mrna1;Target=FBgn0039970.1 119 597 +
ChrX	stalkie_big_nohaplotig	CDS	59976773	59976890	.	-	0	Parent=FBgn0039970.1.mrna1;Target=FBgn0039970.1 1 118 +
ChrX	gffcl	locus	59982470	59993017	.	+	.	ID=RLOC_00003450;geneIDs=FBgn0000384.1.path1;transcripts=FBgn0000384.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59982470	59993017	.	+	.	ID=FBgn0000384.1.mrna1;geneID=FBgn0000384.1.path1;Name=FBgn0000384.1;Dir=sensecoverage=100.0;identity=100.0;matches=1275;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003450
ChrX	stalkie_big_nohaplotig	exon	59982470	59982772	100	+	.	Parent=FBgn0000384.1.mrna1;Target=FBgn0000384.1 1 303 +
ChrX	stalkie_big_nohaplotig	exon	59990071	59990209	100	+	.	Parent=FBgn0000384.1.mrna1;Target=FBgn0000384.1 304 442 +
ChrX	stalkie_big_nohaplotig	exon	59990295	59990500	100	+	.	Parent=FBgn0000384.1.mrna1;Target=FBgn0000384.1 443 648 +
ChrX	stalkie_big_nohaplotig	exon	59990574	59990705	100	+	.	Parent=FBgn0000384.1.mrna1;Target=FBgn0000384.1 649 780 +
ChrX	stalkie_big_nohaplotig	exon	59992458	59992597	100	+	.	Parent=FBgn0000384.1.mrna1;Target=FBgn0000384.1 781 920 +
ChrX	stalkie_big_nohaplotig	exon	59992663	59993017	100	+	.	Parent=FBgn0000384.1.mrna1;Target=FBgn0000384.1 921 1275 +
ChrX	stalkie_big_nohaplotig	CDS	59982470	59982772	.	+	0	Parent=FBgn0000384.1.mrna1;Target=FBgn0000384.1 1 303 +
ChrX	stalkie_big_nohaplotig	CDS	59990071	59990209	.	+	0	Parent=FBgn0000384.1.mrna1;Target=FBgn0000384.1 304 442 +
ChrX	stalkie_big_nohaplotig	CDS	59990295	59990500	.	+	2	Parent=FBgn0000384.1.mrna1;Target=FBgn0000384.1 443 648 +
ChrX	stalkie_big_nohaplotig	CDS	59990574	59990705	.	+	0	Parent=FBgn0000384.1.mrna1;Target=FBgn0000384.1 649 780 +
ChrX	stalkie_big_nohaplotig	CDS	59992458	59992597	.	+	0	Parent=FBgn0000384.1.mrna1;Target=FBgn0000384.1 781 920 +
ChrX	stalkie_big_nohaplotig	CDS	59992663	59993017	.	+	1	Parent=FBgn0000384.1.mrna1;Target=FBgn0000384.1 921 1275 +
ChrX	gffcl	locus	59996554	60006195	.	-	.	ID=RLOC_00003451;geneIDs=FBgn0033028.1.path1;transcripts=FBgn0033028.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	59996554	60006195	.	-	.	ID=FBgn0033028.1.mrna1;geneID=FBgn0033028.1.path1;Name=FBgn0033028.1;Dir=sensecoverage=96.9;identity=100.0;matches=2040;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003451
ChrX	stalkie_big_nohaplotig	exon	59996554	59997970	100	-	.	Parent=FBgn0033028.1.mrna1;Target=FBgn0033028.1 690 2106 +
ChrX	stalkie_big_nohaplotig	exon	59998038	59998217	100	-	.	Parent=FBgn0033028.1.mrna1;Target=FBgn0033028.1 510 689 +
ChrX	stalkie_big_nohaplotig	exon	60001319	60001445	100	-	.	Parent=FBgn0033028.1.mrna1;Target=FBgn0033028.1 383 509 +
ChrX	stalkie_big_nohaplotig	exon	60001516	60001740	100	-	.	Parent=FBgn0033028.1.mrna1;Target=FBgn0033028.1 158 382 +
ChrX	stalkie_big_nohaplotig	exon	60006105	60006195	100	-	.	Parent=FBgn0033028.1.mrna1;Target=FBgn0033028.1 67 157 +
ChrX	stalkie_big_nohaplotig	CDS	59996554	59997970	.	-	1	Parent=FBgn0033028.1.mrna1;Target=FBgn0033028.1 690 2106 +
ChrX	stalkie_big_nohaplotig	CDS	59998038	59998217	.	-	1	Parent=FBgn0033028.1.mrna1;Target=FBgn0033028.1 510 689 +
ChrX	stalkie_big_nohaplotig	CDS	60001319	60001445	.	-	2	Parent=FBgn0033028.1.mrna1;Target=FBgn0033028.1 383 509 +
ChrX	stalkie_big_nohaplotig	CDS	60001516	60001740	.	-	2	Parent=FBgn0033028.1.mrna1;Target=FBgn0033028.1 158 382 +
ChrX	stalkie_big_nohaplotig	CDS	60006105	60006195	.	-	0	Parent=FBgn0033028.1.mrna1;Target=FBgn0033028.1 67 157 +
ChrX	gffcl	locus	60038553	60046292	.	-	.	ID=RLOC_00003452;geneIDs=FBgn0032797.1.path1;transcripts=FBgn0032797.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60038553	60046292	.	-	.	ID=FBgn0032797.1.mrna1;geneID=FBgn0032797.1.path1;Name=FBgn0032797.1;Dir=sensecoverage=100.0;identity=100.0;matches=3629;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003452
ChrX	stalkie_big_nohaplotig	exon	60038553	60039459	99	-	.	Parent=FBgn0032797.1.mrna1;Target=FBgn0032797.1 2724 3630 +
ChrX	stalkie_big_nohaplotig	exon	60039515	60039674	100	-	.	Parent=FBgn0032797.1.mrna1;Target=FBgn0032797.1 2564 2723 +
ChrX	stalkie_big_nohaplotig	exon	60039939	60040057	100	-	.	Parent=FBgn0032797.1.mrna1;Target=FBgn0032797.1 2445 2563 +
ChrX	stalkie_big_nohaplotig	exon	60040136	60040250	100	-	.	Parent=FBgn0032797.1.mrna1;Target=FBgn0032797.1 2330 2444 +
ChrX	stalkie_big_nohaplotig	exon	60040346	60040488	100	-	.	Parent=FBgn0032797.1.mrna1;Target=FBgn0032797.1 2187 2329 +
ChrX	stalkie_big_nohaplotig	exon	60041314	60041666	100	-	.	Parent=FBgn0032797.1.mrna1;Target=FBgn0032797.1 1834 2186 +
ChrX	stalkie_big_nohaplotig	exon	60042655	60042762	100	-	.	Parent=FBgn0032797.1.mrna1;Target=FBgn0032797.1 1726 1833 +
ChrX	stalkie_big_nohaplotig	exon	60042835	60042998	100	-	.	Parent=FBgn0032797.1.mrna1;Target=FBgn0032797.1 1562 1725 +
ChrX	stalkie_big_nohaplotig	exon	60043286	60044113	100	-	.	Parent=FBgn0032797.1.mrna1;Target=FBgn0032797.1 734 1561 +
ChrX	stalkie_big_nohaplotig	exon	60045488	60045779	100	-	.	Parent=FBgn0032797.1.mrna1;Target=FBgn0032797.1 442 733 +
ChrX	stalkie_big_nohaplotig	exon	60045852	60046292	100	-	.	Parent=FBgn0032797.1.mrna1;Target=FBgn0032797.1 1 441 +
ChrX	stalkie_big_nohaplotig	CDS	60038553	60039459	.	-	1	Parent=FBgn0032797.1.mrna1;Target=FBgn0032797.1 2724 3630 +
ChrX	stalkie_big_nohaplotig	CDS	60039515	60039674	.	-	2	Parent=FBgn0032797.1.mrna1;Target=FBgn0032797.1 2564 2723 +
ChrX	stalkie_big_nohaplotig	CDS	60039939	60040057	.	-	1	Parent=FBgn0032797.1.mrna1;Target=FBgn0032797.1 2445 2563 +
ChrX	stalkie_big_nohaplotig	CDS	60040136	60040250	.	-	2	Parent=FBgn0032797.1.mrna1;Target=FBgn0032797.1 2330 2444 +
ChrX	stalkie_big_nohaplotig	CDS	60040346	60040488	.	-	1	Parent=FBgn0032797.1.mrna1;Target=FBgn0032797.1 2187 2329 +
ChrX	stalkie_big_nohaplotig	CDS	60041314	60041666	.	-	0	Parent=FBgn0032797.1.mrna1;Target=FBgn0032797.1 1834 2186 +
ChrX	stalkie_big_nohaplotig	CDS	60042655	60042762	.	-	0	Parent=FBgn0032797.1.mrna1;Target=FBgn0032797.1 1726 1833 +
ChrX	stalkie_big_nohaplotig	CDS	60042835	60042998	.	-	2	Parent=FBgn0032797.1.mrna1;Target=FBgn0032797.1 1562 1725 +
ChrX	stalkie_big_nohaplotig	CDS	60043286	60044113	.	-	2	Parent=FBgn0032797.1.mrna1;Target=FBgn0032797.1 734 1561 +
ChrX	stalkie_big_nohaplotig	CDS	60045488	60045779	.	-	0	Parent=FBgn0032797.1.mrna1;Target=FBgn0032797.1 442 733 +
ChrX	stalkie_big_nohaplotig	CDS	60045852	60046292	.	-	0	Parent=FBgn0032797.1.mrna1;Target=FBgn0032797.1 1 441 +
ChrX	gffcl	locus	60053946	60062901	.	-	.	ID=RLOC_00003453;geneIDs=FBgn0032797.path1;transcripts=FBgn0032797.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60053946	60062901	.	-	.	ID=FBgn0032797.mrna1;geneID=FBgn0032797.path1;Name=FBgn0032797;Dir=sensecoverage=100.0;identity=100.0;matches=933;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003453
ChrX	stalkie_big_nohaplotig	exon	60053946	60053986	100	-	.	Parent=FBgn0032797.mrna1;Target=FBgn0032797 893 933 +
ChrX	stalkie_big_nohaplotig	exon	60054311	60054487	100	-	.	Parent=FBgn0032797.mrna1;Target=FBgn0032797 716 892 +
ChrX	stalkie_big_nohaplotig	exon	60054567	60054758	100	-	.	Parent=FBgn0032797.mrna1;Target=FBgn0032797 524 715 +
ChrX	stalkie_big_nohaplotig	exon	60054845	60055024	100	-	.	Parent=FBgn0032797.mrna1;Target=FBgn0032797 344 523 +
ChrX	stalkie_big_nohaplotig	exon	60056233	60056502	100	-	.	Parent=FBgn0032797.mrna1;Target=FBgn0032797 74 343 +
ChrX	stalkie_big_nohaplotig	exon	60062829	60062901	100	-	.	Parent=FBgn0032797.mrna1;Target=FBgn0032797 1 73 +
ChrX	stalkie_big_nohaplotig	CDS	60053946	60053986	.	-	2	Parent=FBgn0032797.mrna1;Target=FBgn0032797 893 933 +
ChrX	stalkie_big_nohaplotig	CDS	60054311	60054487	.	-	2	Parent=FBgn0032797.mrna1;Target=FBgn0032797 716 892 +
ChrX	stalkie_big_nohaplotig	CDS	60054567	60054758	.	-	2	Parent=FBgn0032797.mrna1;Target=FBgn0032797 524 715 +
ChrX	stalkie_big_nohaplotig	CDS	60054845	60055024	.	-	2	Parent=FBgn0032797.mrna1;Target=FBgn0032797 344 523 +
ChrX	stalkie_big_nohaplotig	CDS	60056233	60056502	.	-	2	Parent=FBgn0032797.mrna1;Target=FBgn0032797 74 343 +
ChrX	stalkie_big_nohaplotig	CDS	60062829	60062901	.	-	0	Parent=FBgn0032797.mrna1;Target=FBgn0032797 1 73 +
ChrX	gffcl	locus	60092610	60100049	.	+	.	ID=RLOC_00003454;geneIDs=FBgn0032798.1.path1;transcripts=FBgn0032798.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60092610	60100049	.	+	.	ID=FBgn0032798.1.mrna1;geneID=FBgn0032798.1.path1;Name=FBgn0032798.1;Dir=sensecoverage=99.6;identity=100.0;matches=3967;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003454
ChrX	stalkie_big_nohaplotig	exon	60092610	60092687	100	+	.	Parent=FBgn0032798.1.mrna1;Target=FBgn0032798.1 18 95 +
ChrX	stalkie_big_nohaplotig	exon	60092759	60092967	100	+	.	Parent=FBgn0032798.1.mrna1;Target=FBgn0032798.1 96 304 +
ChrX	stalkie_big_nohaplotig	exon	60093190	60094306	100	+	.	Parent=FBgn0032798.1.mrna1;Target=FBgn0032798.1 305 1421 +
ChrX	stalkie_big_nohaplotig	exon	60094373	60094501	100	+	.	Parent=FBgn0032798.1.mrna1;Target=FBgn0032798.1 1422 1550 +
ChrX	stalkie_big_nohaplotig	exon	60094570	60094675	100	+	.	Parent=FBgn0032798.1.mrna1;Target=FBgn0032798.1 1551 1656 +
ChrX	stalkie_big_nohaplotig	exon	60096545	60097329	100	+	.	Parent=FBgn0032798.1.mrna1;Target=FBgn0032798.1 1657 2441 +
ChrX	stalkie_big_nohaplotig	exon	60097400	60098078	100	+	.	Parent=FBgn0032798.1.mrna1;Target=FBgn0032798.1 2442 3120 +
ChrX	stalkie_big_nohaplotig	exon	60098153	60098343	100	+	.	Parent=FBgn0032798.1.mrna1;Target=FBgn0032798.1 3121 3311 +
ChrX	stalkie_big_nohaplotig	exon	60098402	60098874	100	+	.	Parent=FBgn0032798.1.mrna1;Target=FBgn0032798.1 3312 3784 +
ChrX	stalkie_big_nohaplotig	exon	60099850	60100049	100	+	.	Parent=FBgn0032798.1.mrna1;Target=FBgn0032798.1 3785 3984 +
ChrX	stalkie_big_nohaplotig	CDS	60092611	60092687	.	+	0	Parent=FBgn0032798.1.mrna1;Target=FBgn0032798.1 19 95 +
ChrX	stalkie_big_nohaplotig	CDS	60092759	60092967	.	+	1	Parent=FBgn0032798.1.mrna1;Target=FBgn0032798.1 96 304 +
ChrX	stalkie_big_nohaplotig	CDS	60093190	60094306	.	+	2	Parent=FBgn0032798.1.mrna1;Target=FBgn0032798.1 305 1421 +
ChrX	stalkie_big_nohaplotig	CDS	60094373	60094501	.	+	1	Parent=FBgn0032798.1.mrna1;Target=FBgn0032798.1 1422 1550 +
ChrX	stalkie_big_nohaplotig	CDS	60094570	60094675	.	+	1	Parent=FBgn0032798.1.mrna1;Target=FBgn0032798.1 1551 1656 +
ChrX	stalkie_big_nohaplotig	CDS	60096545	60097329	.	+	0	Parent=FBgn0032798.1.mrna1;Target=FBgn0032798.1 1657 2441 +
ChrX	stalkie_big_nohaplotig	CDS	60097400	60098078	.	+	1	Parent=FBgn0032798.1.mrna1;Target=FBgn0032798.1 2442 3120 +
ChrX	stalkie_big_nohaplotig	CDS	60098153	60098343	.	+	0	Parent=FBgn0032798.1.mrna1;Target=FBgn0032798.1 3121 3311 +
ChrX	stalkie_big_nohaplotig	CDS	60098402	60098874	.	+	1	Parent=FBgn0032798.1.mrna1;Target=FBgn0032798.1 3312 3784 +
ChrX	stalkie_big_nohaplotig	CDS	60099850	60100049	.	+	2	Parent=FBgn0032798.1.mrna1;Target=FBgn0032798.1 3785 3984 +
ChrX	gffcl	locus	60100536	60100738	.	+	.	ID=RLOC_00003455;geneIDs=comp95101_c0_seq1.path1;transcripts=comp95101_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60100536	60100738	.	+	.	ID=comp95101_c0_seq1.mrna1;geneID=comp95101_c0_seq1.path1;Name=comp95101_c0_seq1;Dir=indeterminatecoverage=95.3;identity=100.0;matches=203;mismatches=0;indels=0;unknowns=0;Target=comp95101_c0_seq1 213 11 .;CDS_Target=comp95101_c0_seq1 67 11 .;locus=RLOC_00003455
ChrX	stalkie_big_nohaplotig	exon	60100536	60100738	100	+	.	Parent=comp95101_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	60100536	60100592	.	+	0	Parent=comp95101_c0_seq1.mrna1
ChrX	gffcl	locus	60161865	60176392	.	+	.	ID=RLOC_00003456;geneIDs=FBgn0000153.1.path1;transcripts=FBgn0000153.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60161865	60176392	.	+	.	ID=FBgn0000153.1.mrna1;geneID=FBgn0000153.1.path1;Name=FBgn0000153.1;Dir=sensecoverage=100.0;identity=100.0;matches=1890;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003456
ChrX	stalkie_big_nohaplotig	exon	60161865	60162791	100	+	.	Parent=FBgn0000153.1.mrna1;Target=FBgn0000153.1 1 927 +
ChrX	stalkie_big_nohaplotig	exon	60175348	60175715	100	+	.	Parent=FBgn0000153.1.mrna1;Target=FBgn0000153.1 928 1295 +
ChrX	stalkie_big_nohaplotig	exon	60175798	60176392	100	+	.	Parent=FBgn0000153.1.mrna1;Target=FBgn0000153.1 1296 1890 +
ChrX	stalkie_big_nohaplotig	CDS	60161865	60162791	.	+	0	Parent=FBgn0000153.1.mrna1;Target=FBgn0000153.1 1 927 +
ChrX	stalkie_big_nohaplotig	CDS	60175348	60175715	.	+	0	Parent=FBgn0000153.1.mrna1;Target=FBgn0000153.1 928 1295 +
ChrX	stalkie_big_nohaplotig	CDS	60175798	60176392	.	+	1	Parent=FBgn0000153.1.mrna1;Target=FBgn0000153.1 1296 1890 +
ChrX	gffcl	locus	60165542	60165945	.	+	.	ID=RLOC_00003457;geneIDs=comp75877_c0_seq1.path1;transcripts=comp75877_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60165542	60165945	.	+	.	ID=comp75877_c0_seq1.mrna1;geneID=comp75877_c0_seq1.path1;Name=comp75877_c0_seq1;Dir=indeterminatecoverage=98.8;identity=100.0;matches=404;mismatches=0;indels=0;unknowns=0;Target=comp75877_c0_seq1 409 6 .;CDS_Target=comp75877_c0_seq1 126 7 .;locus=RLOC_00003457
ChrX	stalkie_big_nohaplotig	exon	60165542	60165945	100	+	.	Parent=comp75877_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	60165543	60165662	.	+	0	Parent=comp75877_c0_seq1.mrna1
ChrX	gffcl	locus	60169414	60170197	.	-	.	ID=RLOC_00003458;geneIDs=comp964384_c0_seq1.path1;transcripts=comp964384_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60169414	60170197	.	-	.	ID=comp964384_c0_seq1.mrna1;geneID=comp964384_c0_seq1.path1;Name=comp964384_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=784;mismatches=0;indels=0;unknowns=0;Target=comp964384_c0_seq1 784 1 .;CDS_Target=comp964384_c0_seq1 599 456 .;locus=RLOC_00003458
ChrX	stalkie_big_nohaplotig	exon	60169414	60170197	100	-	.	Parent=comp964384_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	60169599	60169742	.	-	0	Parent=comp964384_c0_seq1.mrna1
ChrX	gffcl	locus	60170209	60170927	.	+	.	ID=RLOC_00003459;geneIDs=comp943653_c0_seq1.path1;transcripts=comp943653_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60170209	60170927	.	+	.	ID=comp943653_c0_seq1.mrna1;geneID=comp943653_c0_seq1.path1;Name=comp943653_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=716;mismatches=3;indels=0;unknowns=0;Target=comp943653_c0_seq1 719 1 .;CDS_Target=comp943653_c0_seq1 325 212 .;locus=RLOC_00003459
ChrX	stalkie_big_nohaplotig	exon	60170209	60170927	99	+	.	Parent=comp943653_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	60170420	60170533	.	+	0	Parent=comp943653_c0_seq1.mrna1
ChrX	gffcl	locus	60171480	60171912	.	-	.	ID=RLOC_00003460;geneIDs=comp68811_c0_seq1.path1;transcripts=comp68811_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60171480	60171912	.	-	.	ID=comp68811_c0_seq1.mrna1;geneID=comp68811_c0_seq1.path1;Name=comp68811_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=433;mismatches=0;indels=0;unknowns=0;Target=comp68811_c0_seq1 433 1 .;CDS_Target=comp68811_c0_seq1 412 311 .;locus=RLOC_00003460
ChrX	stalkie_big_nohaplotig	exon	60171480	60171912	100	-	.	Parent=comp68811_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	60171501	60171602	.	-	0	Parent=comp68811_c0_seq1.mrna1
ChrX	gffcl	locus	60172746	60173219	.	+	.	ID=RLOC_00003461;geneIDs=comp67200_c0_seq1.path1;transcripts=comp67200_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60172746	60173219	.	+	.	ID=comp67200_c0_seq1.mrna1;geneID=comp67200_c0_seq1.path1;Name=comp67200_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=474;mismatches=0;indels=0;unknowns=0;Target=comp67200_c0_seq1 474 1 .;CDS_Target=comp67200_c0_seq1 421 347 .;locus=RLOC_00003461
ChrX	stalkie_big_nohaplotig	exon	60172746	60173219	100	+	.	Parent=comp67200_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	60173092	60173166	.	+	0	Parent=comp67200_c0_seq1.mrna1
ChrX	gffcl	locus	60173476	60174326	.	+	.	ID=RLOC_00003462;geneIDs=comp142306_c0_seq1.path1;transcripts=comp142306_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60173476	60174326	.	+	.	ID=comp142306_c0_seq1.mrna1;geneID=comp142306_c0_seq1.path1;Name=comp142306_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=851;mismatches=0;indels=0;unknowns=0;Target=comp142306_c0_seq1 851 1 .;CDS_Target=comp142306_c0_seq1 166 74 .;locus=RLOC_00003462
ChrX	stalkie_big_nohaplotig	exon	60173476	60174326	100	+	.	Parent=comp142306_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	60173549	60173641	.	+	0	Parent=comp142306_c0_seq1.mrna1
ChrX	gffcl	locus	60174687	60175080	.	+	.	ID=RLOC_00003463;geneIDs=comp103966_c0_seq1.path1;transcripts=comp103966_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60174687	60175080	.	+	.	ID=comp103966_c0_seq1.mrna1;geneID=comp103966_c0_seq1.path1;Name=comp103966_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=392;mismatches=2;indels=0;unknowns=0;Target=comp103966_c0_seq1 394 1 .;CDS_Target=comp103966_c0_seq1 155 105 .;locus=RLOC_00003463
ChrX	stalkie_big_nohaplotig	exon	60174687	60175080	99	+	.	Parent=comp103966_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	60174791	60174841	.	+	0	Parent=comp103966_c0_seq1.mrna1
ChrX	gffcl	locus	60188755	60190005	.	-	.	ID=RLOC_00003464;geneIDs=FBgn0001961.1.path1;transcripts=FBgn0001961.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60188755	60190005	.	-	.	ID=FBgn0001961.1.mrna1;geneID=FBgn0001961.1.path1;Name=FBgn0001961.1;Dir=sensecoverage=100.0;identity=100.0;matches=1131;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003464
ChrX	stalkie_big_nohaplotig	exon	60188755	60189369	100	-	.	Parent=FBgn0001961.1.mrna1;Target=FBgn0001961.1 517 1131 +
ChrX	stalkie_big_nohaplotig	exon	60189427	60189860	100	-	.	Parent=FBgn0001961.1.mrna1;Target=FBgn0001961.1 83 516 +
ChrX	stalkie_big_nohaplotig	exon	60189924	60190005	100	-	.	Parent=FBgn0001961.1.mrna1;Target=FBgn0001961.1 1 82 +
ChrX	stalkie_big_nohaplotig	CDS	60188755	60189369	.	-	0	Parent=FBgn0001961.1.mrna1;Target=FBgn0001961.1 517 1131 +
ChrX	stalkie_big_nohaplotig	CDS	60189427	60189860	.	-	2	Parent=FBgn0001961.1.mrna1;Target=FBgn0001961.1 83 516 +
ChrX	stalkie_big_nohaplotig	CDS	60189924	60190005	.	-	0	Parent=FBgn0001961.1.mrna1;Target=FBgn0001961.1 1 82 +
ChrX	gffcl	locus	60192105	60192782	.	-	.	ID=RLOC_00003465;geneIDs=FBgn0260407.1.path1;transcripts=FBgn0260407.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60192105	60192782	.	-	.	ID=FBgn0260407.1.mrna1;geneID=FBgn0260407.1.path1;Name=FBgn0260407.1;Dir=sensecoverage=100.0;identity=100.0;matches=555;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003465
ChrX	stalkie_big_nohaplotig	exon	60192105	60192447	100	-	.	Parent=FBgn0260407.1.mrna1;Target=FBgn0260407.1 213 555 +
ChrX	stalkie_big_nohaplotig	exon	60192514	60192675	100	-	.	Parent=FBgn0260407.1.mrna1;Target=FBgn0260407.1 51 212 +
ChrX	stalkie_big_nohaplotig	exon	60192733	60192782	100	-	.	Parent=FBgn0260407.1.mrna1;Target=FBgn0260407.1 1 50 +
ChrX	stalkie_big_nohaplotig	CDS	60192105	60192447	.	-	1	Parent=FBgn0260407.1.mrna1;Target=FBgn0260407.1 213 555 +
ChrX	stalkie_big_nohaplotig	CDS	60192514	60192675	.	-	1	Parent=FBgn0260407.1.mrna1;Target=FBgn0260407.1 51 212 +
ChrX	stalkie_big_nohaplotig	CDS	60192733	60192782	.	-	0	Parent=FBgn0260407.1.mrna1;Target=FBgn0260407.1 1 50 +
ChrX	gffcl	locus	60201679	60211768	.	+	.	ID=RLOC_00003467;geneIDs=FBgn0028538.1.path1;transcripts=FBgn0028538.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60201679	60211768	.	+	.	ID=FBgn0028538.1.mrna1;geneID=FBgn0028538.1.path1;Name=FBgn0028538.1;Dir=sensecoverage=100.0;identity=99.9;matches=5300;mismatches=4;indels=0;unknowns=0;locus=RLOC_00003467
ChrX	stalkie_big_nohaplotig	exon	60201679	60202564	100	+	.	Parent=FBgn0028538.1.mrna1;Target=FBgn0028538.1 1 886 +
ChrX	stalkie_big_nohaplotig	exon	60204622	60206936	99	+	.	Parent=FBgn0028538.1.mrna1;Target=FBgn0028538.1 887 3201 +
ChrX	stalkie_big_nohaplotig	exon	60208334	60210301	100	+	.	Parent=FBgn0028538.1.mrna1;Target=FBgn0028538.1 3202 5169 +
ChrX	stalkie_big_nohaplotig	exon	60211634	60211768	100	+	.	Parent=FBgn0028538.1.mrna1;Target=FBgn0028538.1 5170 5304 +
ChrX	stalkie_big_nohaplotig	CDS	60201679	60202564	.	+	0	Parent=FBgn0028538.1.mrna1;Target=FBgn0028538.1 1 886 +
ChrX	stalkie_big_nohaplotig	CDS	60204622	60206936	.	+	2	Parent=FBgn0028538.1.mrna1;Target=FBgn0028538.1 887 3201 +
ChrX	stalkie_big_nohaplotig	CDS	60208334	60210301	.	+	0	Parent=FBgn0028538.1.mrna1;Target=FBgn0028538.1 3202 5169 +
ChrX	stalkie_big_nohaplotig	CDS	60211634	60211768	.	+	0	Parent=FBgn0028538.1.mrna1;Target=FBgn0028538.1 5170 5304 +
ChrX	gffcl	locus	60212040	60212093	.	-	.	ID=RLOC_00003468;geneIDs=comp51858_c0_seq1.path1;transcripts=comp51858_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60212040	60212093	.	-	.	ID=comp51858_c0_seq1.mrna1;geneID=comp51858_c0_seq1.path1;Name=comp51858_c0_seq1;Dir=indeterminatecoverage=15.8;identity=100.0;matches=54;mismatches=0;indels=0;unknowns=0;Target=comp51858_c0_seq1 62 9 .;locus=RLOC_00003468
ChrX	stalkie_big_nohaplotig	exon	60212040	60212093	100	-	.	Parent=comp51858_c0_seq1.mrna1
ChrX	gffcl	locus	60212819	60214175	.	-	.	ID=RLOC_00003469;geneIDs=comp152105_c0_seq1.path1;transcripts=comp152105_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60212819	60214175	.	-	.	ID=comp152105_c0_seq1.mrna1;geneID=comp152105_c0_seq1.path1;Name=comp152105_c0_seq1;Dir=indeterminatecoverage=98.1;identity=99.9;matches=1355;mismatches=2;indels=0;unknowns=0;Target=comp152105_c0_seq1 1383 27 .;CDS_Target=comp152105_c0_seq1 332 201 .;locus=RLOC_00003469
ChrX	stalkie_big_nohaplotig	exon	60212819	60214175	99	-	.	Parent=comp152105_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	60213870	60214001	.	-	0	Parent=comp152105_c0_seq1.mrna1
ChrX	gffcl	locus	60242907	60278963	.	+	.	ID=RLOC_00003470;geneIDs=FBgn0027844.1.path1;transcripts=FBgn0027844.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60242907	60278963	.	+	.	ID=FBgn0027844.1.mrna1;geneID=FBgn0027844.1.path1;Name=FBgn0027844.1;Dir=sensecoverage=100.0;identity=100.0;matches=861;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003470
ChrX	stalkie_big_nohaplotig	exon	60242907	60242991	100	+	.	Parent=FBgn0027844.1.mrna1;Target=FBgn0027844.1 1 85 +
ChrX	stalkie_big_nohaplotig	exon	60278042	60278200	100	+	.	Parent=FBgn0027844.1.mrna1;Target=FBgn0027844.1 86 244 +
ChrX	stalkie_big_nohaplotig	exon	60278270	60278526	100	+	.	Parent=FBgn0027844.1.mrna1;Target=FBgn0027844.1 245 501 +
ChrX	stalkie_big_nohaplotig	exon	60278604	60278963	100	+	.	Parent=FBgn0027844.1.mrna1;Target=FBgn0027844.1 502 861 +
ChrX	stalkie_big_nohaplotig	CDS	60242907	60242991	.	+	0	Parent=FBgn0027844.1.mrna1;Target=FBgn0027844.1 1 85 +
ChrX	stalkie_big_nohaplotig	CDS	60278042	60278200	.	+	2	Parent=FBgn0027844.1.mrna1;Target=FBgn0027844.1 86 244 +
ChrX	stalkie_big_nohaplotig	CDS	60278270	60278526	.	+	2	Parent=FBgn0027844.1.mrna1;Target=FBgn0027844.1 245 501 +
ChrX	stalkie_big_nohaplotig	CDS	60278604	60278963	.	+	0	Parent=FBgn0027844.1.mrna1;Target=FBgn0027844.1 502 861 +
ChrX	gffcl	locus	60285865	60286245	.	+	.	ID=RLOC_00003471;geneIDs=FBgn0051855.1.path1;transcripts=FBgn0051855.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60285865	60286245	.	+	.	ID=FBgn0051855.1.mrna1;geneID=FBgn0051855.1.path1;Name=FBgn0051855.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=381;mismatches=0;indels=0;unknowns=0;Target=FBgn0051855.1 381 1 .;locus=RLOC_00003471
ChrX	stalkie_big_nohaplotig	exon	60285865	60286245	100	+	.	Parent=FBgn0051855.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	60285865	60286245	.	+	0	Parent=FBgn0051855.1.mrna1
ChrX	gffcl	locus	60287731	60288589	.	-	.	ID=RLOC_00003472;geneIDs=FBgn0032799.1.path1;transcripts=FBgn0032799.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60287731	60288589	.	-	.	ID=FBgn0032799.1.mrna1;geneID=FBgn0032799.1.path1;Name=FBgn0032799.1;Dir=sensecoverage=100.0;identity=100.0;matches=729;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003472
ChrX	stalkie_big_nohaplotig	exon	60287731	60288138	100	-	.	Parent=FBgn0032799.1.mrna1;Target=FBgn0032799.1 322 729 +
ChrX	stalkie_big_nohaplotig	exon	60288201	60288411	100	-	.	Parent=FBgn0032799.1.mrna1;Target=FBgn0032799.1 111 321 +
ChrX	stalkie_big_nohaplotig	exon	60288480	60288589	100	-	.	Parent=FBgn0032799.1.mrna1;Target=FBgn0032799.1 1 110 +
ChrX	stalkie_big_nohaplotig	CDS	60287731	60288138	.	-	0	Parent=FBgn0032799.1.mrna1;Target=FBgn0032799.1 322 729 +
ChrX	stalkie_big_nohaplotig	CDS	60288201	60288411	.	-	1	Parent=FBgn0032799.1.mrna1;Target=FBgn0032799.1 111 321 +
ChrX	stalkie_big_nohaplotig	CDS	60288480	60288589	.	-	0	Parent=FBgn0032799.1.mrna1;Target=FBgn0032799.1 1 110 +
ChrX	gffcl	locus	60290100	60319194	.	+	.	ID=RLOC_00003473;geneIDs=FBgn0032800.1.path1,comp161494_c6_seq1.path1;transcripts=FBgn0032800.1.mrna1,comp161494_c6_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60290100	60311713	.	+	.	ID=FBgn0032800.1.mrna1;geneID=FBgn0032800.1.path1;Name=FBgn0032800.1;Dir=sensecoverage=100.0;identity=100.0;matches=3038;mismatches=0;indels=0;unknowns=1;locus=RLOC_00003473
ChrX	stalkie_big_nohaplotig	exon	60290100	60290169	100	+	.	Parent=FBgn0032800.1.mrna1;Target=FBgn0032800.1 1 70 +
ChrX	stalkie_big_nohaplotig	exon	60304535	60304702	100	+	.	Parent=FBgn0032800.1.mrna1;Target=FBgn0032800.1 71 238 +
ChrX	stalkie_big_nohaplotig	exon	60304782	60305898	100	+	.	Parent=FBgn0032800.1.mrna1;Target=FBgn0032800.1 239 1355 +
ChrX	stalkie_big_nohaplotig	exon	60306316	60306433	100	+	.	Parent=FBgn0032800.1.mrna1;Target=FBgn0032800.1 1356 1473 +
ChrX	stalkie_big_nohaplotig	exon	60306649	60307829	100	+	.	Parent=FBgn0032800.1.mrna1;Target=FBgn0032800.1 1474 2654 +
ChrX	stalkie_big_nohaplotig	exon	60308257	60308402	100	+	.	Parent=FBgn0032800.1.mrna1;Target=FBgn0032800.1 2655 2800 +
ChrX	stalkie_big_nohaplotig	exon	60308475	60308576	100	+	.	Parent=FBgn0032800.1.mrna1;Target=FBgn0032800.1 2801 2902 +
ChrX	stalkie_big_nohaplotig	exon	60311577	60311713	100	+	.	Parent=FBgn0032800.1.mrna1;Target=FBgn0032800.1 2903 3039 +
ChrX	stalkie_big_nohaplotig	CDS	60290100	60290169	.	+	0	Parent=FBgn0032800.1.mrna1;Target=FBgn0032800.1 1 70 +
ChrX	stalkie_big_nohaplotig	CDS	60304535	60304702	.	+	2	Parent=FBgn0032800.1.mrna1;Target=FBgn0032800.1 71 238 +
ChrX	stalkie_big_nohaplotig	CDS	60304782	60305898	.	+	2	Parent=FBgn0032800.1.mrna1;Target=FBgn0032800.1 239 1355 +
ChrX	stalkie_big_nohaplotig	CDS	60306316	60306433	.	+	1	Parent=FBgn0032800.1.mrna1;Target=FBgn0032800.1 1356 1473 +
ChrX	stalkie_big_nohaplotig	CDS	60306649	60307829	.	+	0	Parent=FBgn0032800.1.mrna1;Target=FBgn0032800.1 1474 2654 +
ChrX	stalkie_big_nohaplotig	CDS	60308257	60308402	.	+	1	Parent=FBgn0032800.1.mrna1;Target=FBgn0032800.1 2655 2800 +
ChrX	stalkie_big_nohaplotig	CDS	60308475	60308576	.	+	2	Parent=FBgn0032800.1.mrna1;Target=FBgn0032800.1 2801 2902 +
ChrX	stalkie_big_nohaplotig	CDS	60311577	60311713	.	+	2	Parent=FBgn0032800.1.mrna1;Target=FBgn0032800.1 2903 3039 +
ChrX	stalkie_big_nohaplotig	mRNA	60302939	60319194	.	+	.	ID=comp161494_c6_seq1.mrna1;geneID=comp161494_c6_seq1.path1;Name=comp161494_c6_seq1;Dir=sensecoverage=88.4;identity=99.9;matches=3365;mismatches=4;indels=0;unknowns=0;locus=RLOC_00003473
ChrX	stalkie_big_nohaplotig	exon	60302939	60303187	98	+	.	Parent=comp161494_c6_seq1.mrna1;Target=comp161494_c6_seq1 22 270 +
ChrX	stalkie_big_nohaplotig	exon	60304535	60304702	100	+	.	Parent=comp161494_c6_seq1.mrna1;Target=comp161494_c6_seq1 271 438 +
ChrX	stalkie_big_nohaplotig	exon	60304782	60305898	100	+	.	Parent=comp161494_c6_seq1.mrna1;Target=comp161494_c6_seq1 439 1555 +
ChrX	stalkie_big_nohaplotig	exon	60306292	60306433	100	+	.	Parent=comp161494_c6_seq1.mrna1;Target=comp161494_c6_seq1 1556 1697 +
ChrX	stalkie_big_nohaplotig	exon	60306649	60307829	100	+	.	Parent=comp161494_c6_seq1.mrna1;Target=comp161494_c6_seq1 1698 2878 +
ChrX	stalkie_big_nohaplotig	exon	60308257	60308402	100	+	.	Parent=comp161494_c6_seq1.mrna1;Target=comp161494_c6_seq1 2879 3024 +
ChrX	stalkie_big_nohaplotig	exon	60308475	60308576	100	+	.	Parent=comp161494_c6_seq1.mrna1;Target=comp161494_c6_seq1 3025 3126 +
ChrX	stalkie_big_nohaplotig	exon	60311577	60311817	100	+	.	Parent=comp161494_c6_seq1.mrna1;Target=comp161494_c6_seq1 3127 3367 +
ChrX	stalkie_big_nohaplotig	exon	60313256	60313263	100	+	.	Parent=comp161494_c6_seq1.mrna1;Target=comp161494_c6_seq1 3368 3375 +
ChrX	stalkie_big_nohaplotig	exon	60315396	60315404	100	+	.	Parent=comp161494_c6_seq1.mrna1;Target=comp161494_c6_seq1 3376 3384 +
ChrX	stalkie_big_nohaplotig	exon	60319189	60319194	100	+	.	Parent=comp161494_c6_seq1.mrna1;Target=comp161494_c6_seq1 3385 3390 +
ChrX	stalkie_big_nohaplotig	CDS	60305183	60305898	.	+	0	Parent=comp161494_c6_seq1.mrna1;Target=comp161494_c6_seq1 840 1555 +
ChrX	stalkie_big_nohaplotig	CDS	60306292	60306433	.	+	1	Parent=comp161494_c6_seq1.mrna1;Target=comp161494_c6_seq1 1556 1697 +
ChrX	stalkie_big_nohaplotig	CDS	60306649	60307829	.	+	0	Parent=comp161494_c6_seq1.mrna1;Target=comp161494_c6_seq1 1698 2878 +
ChrX	stalkie_big_nohaplotig	CDS	60308257	60308402	.	+	1	Parent=comp161494_c6_seq1.mrna1;Target=comp161494_c6_seq1 2879 3024 +
ChrX	stalkie_big_nohaplotig	CDS	60308475	60308576	.	+	2	Parent=comp161494_c6_seq1.mrna1;Target=comp161494_c6_seq1 3025 3126 +
ChrX	stalkie_big_nohaplotig	CDS	60311577	60311716	.	+	2	Parent=comp161494_c6_seq1.mrna1;Target=comp161494_c6_seq1 3127 3266 +
ChrX	gffcl	locus	60299553	60301854	.	-	.	ID=RLOC_00003474;geneIDs=FBgn0032801.1.path1;transcripts=FBgn0032801.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60299553	60301854	.	-	.	ID=FBgn0032801.1.mrna1;geneID=FBgn0032801.1.path1;Name=FBgn0032801.1;Dir=sensecoverage=100.0;identity=100.0;matches=687;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003474
ChrX	stalkie_big_nohaplotig	exon	60299553	60299872	100	-	.	Parent=FBgn0032801.1.mrna1;Target=FBgn0032801.1 368 687 +
ChrX	stalkie_big_nohaplotig	exon	60299937	60300132	100	-	.	Parent=FBgn0032801.1.mrna1;Target=FBgn0032801.1 172 367 +
ChrX	stalkie_big_nohaplotig	exon	60301684	60301854	100	-	.	Parent=FBgn0032801.1.mrna1;Target=FBgn0032801.1 1 171 +
ChrX	stalkie_big_nohaplotig	CDS	60299553	60299872	.	-	2	Parent=FBgn0032801.1.mrna1;Target=FBgn0032801.1 368 687 +
ChrX	stalkie_big_nohaplotig	CDS	60299937	60300132	.	-	0	Parent=FBgn0032801.1.mrna1;Target=FBgn0032801.1 172 367 +
ChrX	stalkie_big_nohaplotig	CDS	60301684	60301854	.	-	0	Parent=FBgn0032801.1.mrna1;Target=FBgn0032801.1 1 171 +
ChrX	gffcl	locus	60317339	60390429	.	+	.	ID=RLOC_00003475;geneIDs=FBgn0053116.1.path1,comp150381_c0_seq1.path1;transcripts=FBgn0053116.1.mrna1,comp150381_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60317339	60332020	.	+	.	ID=FBgn0053116.1.mrna1;geneID=FBgn0053116.1.path1;Name=FBgn0053116.1;Dir=sensecoverage=100.0;identity=100.0;matches=1308;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003475
ChrX	stalkie_big_nohaplotig	exon	60317339	60317452	100	+	.	Parent=FBgn0053116.1.mrna1;Target=FBgn0053116.1 1 114 +
ChrX	stalkie_big_nohaplotig	exon	60317545	60317613	100	+	.	Parent=FBgn0053116.1.mrna1;Target=FBgn0053116.1 115 183 +
ChrX	stalkie_big_nohaplotig	exon	60327689	60328299	100	+	.	Parent=FBgn0053116.1.mrna1;Target=FBgn0053116.1 184 794 +
ChrX	stalkie_big_nohaplotig	exon	60328382	60328562	100	+	.	Parent=FBgn0053116.1.mrna1;Target=FBgn0053116.1 795 975 +
ChrX	stalkie_big_nohaplotig	exon	60331688	60332020	100	+	.	Parent=FBgn0053116.1.mrna1;Target=FBgn0053116.1 976 1308 +
ChrX	stalkie_big_nohaplotig	CDS	60317339	60317452	.	+	0	Parent=FBgn0053116.1.mrna1;Target=FBgn0053116.1 1 114 +
ChrX	stalkie_big_nohaplotig	CDS	60317545	60317613	.	+	0	Parent=FBgn0053116.1.mrna1;Target=FBgn0053116.1 115 183 +
ChrX	stalkie_big_nohaplotig	CDS	60327689	60328299	.	+	0	Parent=FBgn0053116.1.mrna1;Target=FBgn0053116.1 184 794 +
ChrX	stalkie_big_nohaplotig	CDS	60328382	60328562	.	+	1	Parent=FBgn0053116.1.mrna1;Target=FBgn0053116.1 795 975 +
ChrX	stalkie_big_nohaplotig	CDS	60331688	60332020	.	+	0	Parent=FBgn0053116.1.mrna1;Target=FBgn0053116.1 976 1308 +
ChrX	stalkie_big_nohaplotig	mRNA	60320812	60390429	.	+	.	ID=comp150381_c0_seq1.mrna1;geneID=comp150381_c0_seq1.path1;Name=comp150381_c0_seq1;Dir=indeterminatecoverage=93.4;identity=88.9;matches=937;mismatches=64;indels=53;unknowns=0;locus=RLOC_00003475
ChrX	stalkie_big_nohaplotig	exon	60320812	60320822	100	+	.	Parent=comp150381_c0_seq1.mrna1;Target=comp150381_c0_seq1 87 77 .
ChrX	stalkie_big_nohaplotig	exon	60328389	60328396	100	+	.	Parent=comp150381_c0_seq1.mrna1;Target=comp150381_c0_seq1 95 88 .
ChrX	stalkie_big_nohaplotig	exon	60333728	60333733	100	+	.	Parent=comp150381_c0_seq1.mrna1;Target=comp150381_c0_seq1 101 96 .
ChrX	stalkie_big_nohaplotig	exon	60336098	60336122	42	+	.	Parent=comp150381_c0_seq1.mrna1;Target=comp150381_c0_seq1 160 102 .
ChrX	stalkie_big_nohaplotig	exon	60338399	60338403	60	+	.	Parent=comp150381_c0_seq1.mrna1;Target=comp150381_c0_seq1 165 161 .
ChrX	stalkie_big_nohaplotig	exon	60350707	60350714	100	+	.	Parent=comp150381_c0_seq1.mrna1;Target=comp150381_c0_seq1 173 166 .
ChrX	stalkie_big_nohaplotig	exon	60353118	60353122	100	+	.	Parent=comp150381_c0_seq1.mrna1;Target=comp150381_c0_seq1 178 174 .
ChrX	stalkie_big_nohaplotig	exon	60355715	60355732	70	+	.	Parent=comp150381_c0_seq1.mrna1;Target=comp150381_c0_seq1 198 179 .
ChrX	stalkie_big_nohaplotig	exon	60376615	60376619	100	+	.	Parent=comp150381_c0_seq1.mrna1;Target=comp150381_c0_seq1 203 199 .
ChrX	stalkie_big_nohaplotig	exon	60379687	60379695	100	+	.	Parent=comp150381_c0_seq1.mrna1;Target=comp150381_c0_seq1 213 205 .
ChrX	stalkie_big_nohaplotig	exon	60380265	60380272	100	+	.	Parent=comp150381_c0_seq1.mrna1;Target=comp150381_c0_seq1 221 214 .
ChrX	stalkie_big_nohaplotig	exon	60389491	60389564	83	+	.	Parent=comp150381_c0_seq1.mrna1;Target=comp150381_c0_seq1 302 229 .
ChrX	stalkie_big_nohaplotig	exon	60389613	60390429	92	+	.	Parent=comp150381_c0_seq1.mrna1;Target=comp150381_c0_seq1 1156 323 .
ChrX	stalkie_big_nohaplotig	CDS	60320812	60320822	.	+	0	Parent=comp150381_c0_seq1.mrna1;Target=comp150381_c0_seq1 87 77 .
ChrX	stalkie_big_nohaplotig	CDS	60328389	60328396	.	+	1	Parent=comp150381_c0_seq1.mrna1;Target=comp150381_c0_seq1 95 88 .
ChrX	stalkie_big_nohaplotig	CDS	60333728	60333733	.	+	2	Parent=comp150381_c0_seq1.mrna1;Target=comp150381_c0_seq1 101 96 .
ChrX	stalkie_big_nohaplotig	CDS	60336098	60336114	.	+	2	Parent=comp150381_c0_seq1.mrna1;Target=comp150381_c0_seq1 139 102 .
ChrX	gffcl	locus	60347195	60348090	.	+	.	ID=RLOC_00003476;geneIDs=FBgn0032803.1.path1;transcripts=FBgn0032803.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60347195	60348090	.	+	.	ID=FBgn0032803.1.mrna1;geneID=FBgn0032803.1.path1;Name=FBgn0032803.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=896;mismatches=0;indels=1;unknowns=0;Target=FBgn0032803.1 897 1 .;CDS_Target=FBgn0032803.1 83 3 .;locus=RLOC_00003476
ChrX	stalkie_big_nohaplotig	exon	60347195	60348090	99	+	.	Parent=FBgn0032803.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	60347197	60347276	.	+	0	Parent=FBgn0032803.1.mrna1
ChrX	gffcl	locus	60369207	60370343	.	+	.	ID=RLOC_00003477;geneIDs=comp1285622_c0_seq1.path1;transcripts=comp1285622_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60369207	60370343	.	+	.	ID=comp1285622_c0_seq1.mrna1;geneID=comp1285622_c0_seq1.path1;Name=comp1285622_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=944;mismatches=2;indels=1;unknowns=0;locus=RLOC_00003477
ChrX	stalkie_big_nohaplotig	exon	60369207	60369704	100	+	.	Parent=comp1285622_c0_seq1.mrna1;Target=comp1285622_c0_seq1 449 946 -
ChrX	stalkie_big_nohaplotig	exon	60369765	60369978	100	+	.	Parent=comp1285622_c0_seq1.mrna1;Target=comp1285622_c0_seq1 235 448 -
ChrX	stalkie_big_nohaplotig	exon	60370109	60370343	98	+	.	Parent=comp1285622_c0_seq1.mrna1;Target=comp1285622_c0_seq1 1 234 -
ChrX	stalkie_big_nohaplotig	CDS	60369410	60369704	.	+	0	Parent=comp1285622_c0_seq1.mrna1;Target=comp1285622_c0_seq1 449 743 .
ChrX	stalkie_big_nohaplotig	CDS	60369765	60369978	.	+	2	Parent=comp1285622_c0_seq1.mrna1;Target=comp1285622_c0_seq1 235 448 .
ChrX	stalkie_big_nohaplotig	CDS	60370109	60370184	.	+	1	Parent=comp1285622_c0_seq1.mrna1;Target=comp1285622_c0_seq1 159 234 .
ChrX	gffcl	locus	60387429	60388853	.	+	.	ID=RLOC_00003478;geneIDs=FBgn0050357.1.path1;transcripts=FBgn0050357.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60387429	60388853	.	+	.	ID=FBgn0050357.1.mrna1;geneID=FBgn0050357.1.path1;Name=FBgn0050357.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1425;mismatches=0;indels=0;unknowns=0;Target=FBgn0050357.1 1425 1 .;locus=RLOC_00003478
ChrX	stalkie_big_nohaplotig	exon	60387429	60388853	100	+	.	Parent=FBgn0050357.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	60387429	60388853	.	+	0	Parent=FBgn0050357.1.mrna1
ChrX	gffcl	locus	60391613	60392329	.	-	.	ID=RLOC_00003479;geneIDs=FBgn0014269.2.path1;transcripts=FBgn0014269.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60391613	60392329	.	-	.	ID=FBgn0014269.2.mrna1;geneID=FBgn0014269.2.path1;Name=FBgn0014269.2;Dir=indeterminatecoverage=87.8;identity=83.7;matches=611;mismatches=95;indels=24;unknowns=0;Target=FBgn0014269.2 275 204 .;locus=RLOC_00003479
ChrX	stalkie_big_nohaplotig	exon	60391613	60392081	85	-	.	Parent=FBgn0014269.2.mrna1;Target=FBgn0014269.2 921 458 .
ChrX	stalkie_big_nohaplotig	exon	60392087	60392329	81	-	.	Parent=FBgn0014269.2.mrna1;Target=FBgn0014269.2 346 87 .
ChrX	stalkie_big_nohaplotig	CDS	60392158	60392229	.	-	0	Parent=FBgn0014269.2.mrna1
ChrX	gffcl	locus	60415184	60416227	.	-	.	ID=RLOC_00003480;geneIDs=comp151176_c0_seq1.path1;transcripts=comp151176_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60415184	60416227	.	-	.	ID=comp151176_c0_seq1.mrna1;geneID=comp151176_c0_seq1.path1;Name=comp151176_c0_seq1;Dir=antisensecoverage=98.8;identity=99.8;matches=857;mismatches=2;indels=0;unknowns=0;Target=comp151176_c0_seq1 462 755 .;locus=RLOC_00003480
ChrX	stalkie_big_nohaplotig	exon	60415184	60415365	99	-	.	Parent=comp151176_c0_seq1.mrna1;Target=comp151176_c0_seq1 9 190 -
ChrX	stalkie_big_nohaplotig	exon	60415420	60415589	100	-	.	Parent=comp151176_c0_seq1.mrna1;Target=comp151176_c0_seq1 191 360 -
ChrX	stalkie_big_nohaplotig	exon	60415650	60415735	100	-	.	Parent=comp151176_c0_seq1.mrna1;Target=comp151176_c0_seq1 361 446 -
ChrX	stalkie_big_nohaplotig	exon	60415807	60416227	99	-	.	Parent=comp151176_c0_seq1.mrna1;Target=comp151176_c0_seq1 447 867 -
ChrX	stalkie_big_nohaplotig	CDS	60415822	60416115	.	-	0	Parent=comp151176_c0_seq1.mrna1
ChrX	gffcl	locus	60419943	60431168	.	-	.	ID=RLOC_00003481;geneIDs=comp150417_c0_seq1.path1;transcripts=comp150417_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60419943	60431168	.	-	.	ID=comp150417_c0_seq1.mrna1;geneID=comp150417_c0_seq1.path1;Name=comp150417_c0_seq1;Dir=antisensecoverage=99.6;identity=99.8;matches=812;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003481
ChrX	stalkie_big_nohaplotig	exon	60419943	60420513	99	-	.	Parent=comp150417_c0_seq1.mrna1;Target=comp150417_c0_seq1 1 571 -
ChrX	stalkie_big_nohaplotig	exon	60420571	60420679	100	-	.	Parent=comp150417_c0_seq1.mrna1;Target=comp150417_c0_seq1 572 680 -
ChrX	stalkie_big_nohaplotig	exon	60431035	60431168	99	-	.	Parent=comp150417_c0_seq1.mrna1;Target=comp150417_c0_seq1 681 814 -
ChrX	stalkie_big_nohaplotig	CDS	60419963	60420513	.	-	2	Parent=comp150417_c0_seq1.mrna1;Target=comp150417_c0_seq1 21 571 .
ChrX	stalkie_big_nohaplotig	CDS	60420571	60420634	.	-	0	Parent=comp150417_c0_seq1.mrna1;Target=comp150417_c0_seq1 572 635 .
ChrX	gffcl	locus	60443327	60444422	.	-	.	ID=RLOC_00003482;geneIDs=ORF2686.path1;transcripts=ORF2686.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60443327	60444422	.	-	.	ID=ORF2686.mrna1;geneID=ORF2686.path1;Name=ORF2686;Dir=sensecoverage=100.0;identity=99.5;matches=818;mismatches=4;indels=0;unknowns=0;locus=RLOC_00003482
ChrX	stalkie_big_nohaplotig	exon	60443327	60443491	98	-	.	Parent=ORF2686.mrna1;Target=ORF2686 658 822 +
ChrX	stalkie_big_nohaplotig	exon	60443559	60443708	100	-	.	Parent=ORF2686.mrna1;Target=ORF2686 508 657 +
ChrX	stalkie_big_nohaplotig	exon	60443769	60443894	100	-	.	Parent=ORF2686.mrna1;Target=ORF2686 382 507 +
ChrX	stalkie_big_nohaplotig	exon	60443961	60444105	100	-	.	Parent=ORF2686.mrna1;Target=ORF2686 237 381 +
ChrX	stalkie_big_nohaplotig	exon	60444187	60444422	99	-	.	Parent=ORF2686.mrna1;Target=ORF2686 1 236 +
ChrX	stalkie_big_nohaplotig	CDS	60443327	60443491	.	-	0	Parent=ORF2686.mrna1;Target=ORF2686 658 822 +
ChrX	stalkie_big_nohaplotig	CDS	60443559	60443708	.	-	0	Parent=ORF2686.mrna1;Target=ORF2686 508 657 +
ChrX	stalkie_big_nohaplotig	CDS	60443769	60443894	.	-	0	Parent=ORF2686.mrna1;Target=ORF2686 382 507 +
ChrX	stalkie_big_nohaplotig	CDS	60443961	60444105	.	-	1	Parent=ORF2686.mrna1;Target=ORF2686 237 381 +
ChrX	stalkie_big_nohaplotig	CDS	60444187	60444422	.	-	0	Parent=ORF2686.mrna1;Target=ORF2686 1 236 +
ChrX	gffcl	locus	60586309	60589911	.	-	.	ID=RLOC_00003483;geneIDs=comp1498847_c0_seq1.path1;transcripts=comp1498847_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60586309	60589911	.	-	.	ID=comp1498847_c0_seq1.mrna1;geneID=comp1498847_c0_seq1.path1;Name=comp1498847_c0_seq1;Dir=antisensecoverage=100.0;identity=90.3;matches=260;mismatches=12;indels=16;unknowns=0;Target=comp1498847_c0_seq1 195 209 .;locus=RLOC_00003483
ChrX	stalkie_big_nohaplotig	exon	60586309	60586428	100	-	.	Parent=comp1498847_c0_seq1.mrna1;Target=comp1498847_c0_seq1 1 120 -
ChrX	stalkie_big_nohaplotig	exon	60589744	60589911	83	-	.	Parent=comp1498847_c0_seq1.mrna1;Target=comp1498847_c0_seq1 121 272 -
ChrX	stalkie_big_nohaplotig	CDS	60589818	60589832	.	-	0	Parent=comp1498847_c0_seq1.mrna1
ChrX	gffcl	locus	60601193	60604977	.	-	.	ID=RLOC_00003484;geneIDs=comp157920_c0_seq1.path1;transcripts=comp157920_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60601193	60604977	.	-	.	ID=comp157920_c0_seq1.mrna1;geneID=comp157920_c0_seq1.path1;Name=comp157920_c0_seq1;Dir=sensecoverage=99.7;identity=98.7;matches=1522;mismatches=20;indels=0;unknowns=0;Target=comp157920_c0_seq1 1 324 +;locus=RLOC_00003484
ChrX	stalkie_big_nohaplotig	exon	60601193	60601630	99	-	.	Parent=comp157920_c0_seq1.mrna1;Target=comp157920_c0_seq1 1105 1542 +
ChrX	stalkie_big_nohaplotig	exon	60601697	60601778	95	-	.	Parent=comp157920_c0_seq1.mrna1;Target=comp157920_c0_seq1 1023 1104 +
ChrX	stalkie_big_nohaplotig	exon	60601852	60602082	100	-	.	Parent=comp157920_c0_seq1.mrna1;Target=comp157920_c0_seq1 792 1022 +
ChrX	stalkie_big_nohaplotig	exon	60602142	60602251	95	-	.	Parent=comp157920_c0_seq1.mrna1;Target=comp157920_c0_seq1 682 791 +
ChrX	stalkie_big_nohaplotig	exon	60602310	60602436	99	-	.	Parent=comp157920_c0_seq1.mrna1;Target=comp157920_c0_seq1 555 681 +
ChrX	stalkie_big_nohaplotig	exon	60602538	60602610	100	-	.	Parent=comp157920_c0_seq1.mrna1;Target=comp157920_c0_seq1 482 554 +
ChrX	stalkie_big_nohaplotig	exon	60604322	60604412	100	-	.	Parent=comp157920_c0_seq1.mrna1;Target=comp157920_c0_seq1 391 481 +
ChrX	stalkie_big_nohaplotig	exon	60604514	60604538	96	-	.	Parent=comp157920_c0_seq1.mrna1;Target=comp157920_c0_seq1 366 390 +
ChrX	stalkie_big_nohaplotig	exon	60604613	60604977	98	-	.	Parent=comp157920_c0_seq1.mrna1;Target=comp157920_c0_seq1 1 365 +
ChrX	stalkie_big_nohaplotig	CDS	60604654	60604977	.	-	0	Parent=comp157920_c0_seq1.mrna1
ChrX	gffcl	locus	60618824	60714461	.	-	.	ID=RLOC_00003485;geneIDs=ORF50.path1,comp156803_c0_seq1.path1;transcripts=comp156803_c0_seq1.mrna1,ORF50.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60618824	60711016	.	-	.	ID=comp156803_c0_seq1.mrna1;geneID=comp156803_c0_seq1.path1;Name=comp156803_c0_seq1;Dir=antisensecoverage=90.1;identity=97.0;matches=1049;mismatches=31;indels=1;unknowns=0;locus=RLOC_00003485
ChrX	stalkie_big_nohaplotig	exon	60618824	60619208	96	-	.	Parent=comp156803_c0_seq1.mrna1;Target=comp156803_c0_seq1 1 386 -
ChrX	stalkie_big_nohaplotig	exon	60619322	60619862	96	-	.	Parent=comp156803_c0_seq1.mrna1;Target=comp156803_c0_seq1 387 927 -
ChrX	stalkie_big_nohaplotig	exon	60619929	60619964	100	-	.	Parent=comp156803_c0_seq1.mrna1;Target=comp156803_c0_seq1 928 963 -
ChrX	stalkie_big_nohaplotig	exon	60633287	60633290	100	-	.	Parent=comp156803_c0_seq1.mrna1;Target=comp156803_c0_seq1 972 975 -
ChrX	stalkie_big_nohaplotig	exon	60638927	60638937	100	-	.	Parent=comp156803_c0_seq1.mrna1;Target=comp156803_c0_seq1 976 986 -
ChrX	stalkie_big_nohaplotig	exon	60641237	60641238	100	-	.	Parent=comp156803_c0_seq1.mrna1;Target=comp156803_c0_seq1 990 991 -
ChrX	stalkie_big_nohaplotig	exon	60644875	60644879	100	-	.	Parent=comp156803_c0_seq1.mrna1;Target=comp156803_c0_seq1 992 996 -
ChrX	stalkie_big_nohaplotig	exon	60648049	60648056	100	-	.	Parent=comp156803_c0_seq1.mrna1;Target=comp156803_c0_seq1 997 1004 -
ChrX	stalkie_big_nohaplotig	exon	60654384	60654391	100	-	.	Parent=comp156803_c0_seq1.mrna1;Target=comp156803_c0_seq1 1013 1020 -
ChrX	stalkie_big_nohaplotig	exon	60659811	60659813	100	-	.	Parent=comp156803_c0_seq1.mrna1;Target=comp156803_c0_seq1 1021 1023 -
ChrX	stalkie_big_nohaplotig	exon	60664125	60664137	100	-	.	Parent=comp156803_c0_seq1.mrna1;Target=comp156803_c0_seq1 1024 1036 -
ChrX	stalkie_big_nohaplotig	exon	60665361	60665369	100	-	.	Parent=comp156803_c0_seq1.mrna1;Target=comp156803_c0_seq1 1040 1048 -
ChrX	stalkie_big_nohaplotig	exon	60665423	60665432	100	-	.	Parent=comp156803_c0_seq1.mrna1;Target=comp156803_c0_seq1 1108 1117 -
ChrX	stalkie_big_nohaplotig	exon	60669323	60669327	100	-	.	Parent=comp156803_c0_seq1.mrna1;Target=comp156803_c0_seq1 1132 1136 -
ChrX	stalkie_big_nohaplotig	exon	60689177	60689179	100	-	.	Parent=comp156803_c0_seq1.mrna1;Target=comp156803_c0_seq1 1137 1139 -
ChrX	stalkie_big_nohaplotig	exon	60695614	60695621	100	-	.	Parent=comp156803_c0_seq1.mrna1;Target=comp156803_c0_seq1 1140 1147 -
ChrX	stalkie_big_nohaplotig	exon	60695645	60695651	100	-	.	Parent=comp156803_c0_seq1.mrna1;Target=comp156803_c0_seq1 1190 1196 -
ChrX	stalkie_big_nohaplotig	exon	60701341	60701342	100	-	.	Parent=comp156803_c0_seq1.mrna1;Target=comp156803_c0_seq1 1197 1198 -
ChrX	stalkie_big_nohaplotig	exon	60704568	60704572	100	-	.	Parent=comp156803_c0_seq1.mrna1;Target=comp156803_c0_seq1 1199 1203 -
ChrX	stalkie_big_nohaplotig	exon	60711003	60711016	100	-	.	Parent=comp156803_c0_seq1.mrna1;Target=comp156803_c0_seq1 1204 1217 -
ChrX	stalkie_big_nohaplotig	CDS	60665423	60665432	.	-	2	Parent=comp156803_c0_seq1.mrna1;Target=comp156803_c0_seq1 1108 1117 .
ChrX	stalkie_big_nohaplotig	CDS	60669323	60669326	.	-	0	Parent=comp156803_c0_seq1.mrna1;Target=comp156803_c0_seq1 1132 1135 .
ChrX	stalkie_big_nohaplotig	mRNA	60710598	60714461	.	-	.	ID=ORF50.mrna1;geneID=ORF50.path1;Name=ORF50;Dir=sensecoverage=100.0;identity=99.9;matches=3448;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003485
ChrX	stalkie_big_nohaplotig	exon	60710598	60710860	100	-	.	Parent=ORF50.mrna1;Target=ORF50 3188 3450 +
ChrX	stalkie_big_nohaplotig	exon	60710933	60711110	100	-	.	Parent=ORF50.mrna1;Target=ORF50 3010 3187 +
ChrX	stalkie_big_nohaplotig	exon	60711179	60711691	99	-	.	Parent=ORF50.mrna1;Target=ORF50 2497 3009 +
ChrX	stalkie_big_nohaplotig	exon	60711753	60712688	100	-	.	Parent=ORF50.mrna1;Target=ORF50 1561 2496 +
ChrX	stalkie_big_nohaplotig	exon	60712774	60713436	99	-	.	Parent=ORF50.mrna1;Target=ORF50 898 1560 +
ChrX	stalkie_big_nohaplotig	exon	60713503	60714150	100	-	.	Parent=ORF50.mrna1;Target=ORF50 250 897 +
ChrX	stalkie_big_nohaplotig	exon	60714213	60714461	100	-	.	Parent=ORF50.mrna1;Target=ORF50 1 249 +
ChrX	stalkie_big_nohaplotig	CDS	60710598	60710860	.	-	2	Parent=ORF50.mrna1;Target=ORF50 3188 3450 +
ChrX	stalkie_big_nohaplotig	CDS	60710933	60711110	.	-	0	Parent=ORF50.mrna1;Target=ORF50 3010 3187 +
ChrX	stalkie_big_nohaplotig	CDS	60711179	60711691	.	-	0	Parent=ORF50.mrna1;Target=ORF50 2497 3009 +
ChrX	stalkie_big_nohaplotig	CDS	60711753	60712688	.	-	0	Parent=ORF50.mrna1;Target=ORF50 1561 2496 +
ChrX	stalkie_big_nohaplotig	CDS	60712774	60713436	.	-	0	Parent=ORF50.mrna1;Target=ORF50 898 1560 +
ChrX	stalkie_big_nohaplotig	CDS	60713503	60714150	.	-	0	Parent=ORF50.mrna1;Target=ORF50 250 897 +
ChrX	stalkie_big_nohaplotig	CDS	60714213	60714461	.	-	0	Parent=ORF50.mrna1;Target=ORF50 1 249 +
ChrX	gffcl	locus	60631577	60632579	.	-	.	ID=RLOC_00003486;geneIDs=comp162357_c1_seq1.path1;transcripts=comp162357_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60631577	60632579	.	-	.	ID=comp162357_c1_seq1.mrna1;geneID=comp162357_c1_seq1.path1;Name=comp162357_c1_seq1;Dir=indeterminatecoverage=95.3;identity=94.8;matches=957;mismatches=37;indels=15;unknowns=0;Target=comp162357_c1_seq1 1049 50 .;CDS_Target=comp162357_c1_seq1 163 50 .;locus=RLOC_00003486
ChrX	stalkie_big_nohaplotig	exon	60631577	60632579	94	-	.	Parent=comp162357_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	60632458	60632579	.	-	0	Parent=comp162357_c1_seq1.mrna1
ChrX	gffcl	locus	60662472	60666689	.	-	.	ID=RLOC_00003487;geneIDs=comp144839_c0_seq1.path1;transcripts=comp144839_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60662472	60666689	.	-	.	ID=comp144839_c0_seq1.mrna1;geneID=comp144839_c0_seq1.path1;Name=comp144839_c0_seq1;Dir=antisensecoverage=99.9;identity=99.9;matches=1026;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003487
ChrX	stalkie_big_nohaplotig	exon	60662472	60662701	100	-	.	Parent=comp144839_c0_seq1.mrna1;Target=comp144839_c0_seq1 1 230 -
ChrX	stalkie_big_nohaplotig	exon	60664590	60664652	100	-	.	Parent=comp144839_c0_seq1.mrna1;Target=comp144839_c0_seq1 231 293 -
ChrX	stalkie_big_nohaplotig	exon	60664706	60664999	99	-	.	Parent=comp144839_c0_seq1.mrna1;Target=comp144839_c0_seq1 294 587 -
ChrX	stalkie_big_nohaplotig	exon	60665071	60665132	100	-	.	Parent=comp144839_c0_seq1.mrna1;Target=comp144839_c0_seq1 588 649 -
ChrX	stalkie_big_nohaplotig	exon	60666234	60666339	100	-	.	Parent=comp144839_c0_seq1.mrna1;Target=comp144839_c0_seq1 650 755 -
ChrX	stalkie_big_nohaplotig	exon	60666418	60666689	100	-	.	Parent=comp144839_c0_seq1.mrna1;Target=comp144839_c0_seq1 756 1027 -
ChrX	stalkie_big_nohaplotig	CDS	60662652	60662701	.	-	2	Parent=comp144839_c0_seq1.mrna1;Target=comp144839_c0_seq1 181 230 .
ChrX	stalkie_big_nohaplotig	CDS	60664590	60664652	.	-	2	Parent=comp144839_c0_seq1.mrna1;Target=comp144839_c0_seq1 231 293 .
ChrX	stalkie_big_nohaplotig	CDS	60664706	60664814	.	-	0	Parent=comp144839_c0_seq1.mrna1;Target=comp144839_c0_seq1 294 402 .
ChrX	gffcl	locus	60675466	60676020	.	+	.	ID=RLOC_00003489;geneIDs=FBgn0260939.1.path1;transcripts=FBgn0260939.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60675466	60676020	.	+	.	ID=FBgn0260939.1.mrna1;geneID=FBgn0260939.1.path1;Name=FBgn0260939.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=554;mismatches=1;indels=0;unknowns=0;Target=FBgn0260939.1 555 1 .;locus=RLOC_00003489
ChrX	stalkie_big_nohaplotig	exon	60675466	60676020	99	+	.	Parent=FBgn0260939.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	60675466	60676020	.	+	0	Parent=FBgn0260939.1.mrna1
ChrX	gffcl	locus	60718388	60719240	.	-	.	ID=RLOC_00003491;geneIDs=comp143800_c0_seq1.path1;transcripts=comp143800_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60718388	60719240	.	-	.	ID=comp143800_c0_seq1.mrna1;geneID=comp143800_c0_seq1.path1;Name=comp143800_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=798;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003491
ChrX	stalkie_big_nohaplotig	exon	60718388	60718642	99	-	.	Parent=comp143800_c0_seq1.mrna1;Target=comp143800_c0_seq1 1 255 -
ChrX	stalkie_big_nohaplotig	exon	60718697	60719240	100	-	.	Parent=comp143800_c0_seq1.mrna1;Target=comp143800_c0_seq1 256 799 -
ChrX	stalkie_big_nohaplotig	CDS	60718550	60718642	.	-	0	Parent=comp143800_c0_seq1.mrna1;Target=comp143800_c0_seq1 163 255 .
ChrX	stalkie_big_nohaplotig	CDS	60718697	60719113	.	-	0	Parent=comp143800_c0_seq1.mrna1;Target=comp143800_c0_seq1 256 672 .
ChrX	gffcl	locus	60719992	60720594	.	-	.	ID=RLOC_00003492;geneIDs=comp119071_c0_seq1.path1;transcripts=comp119071_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60719992	60720594	.	-	.	ID=comp119071_c0_seq1.mrna1;geneID=comp119071_c0_seq1.path1;Name=comp119071_c0_seq1;Dir=antisensecoverage=99.3;identity=98.5;matches=540;mismatches=8;indels=0;unknowns=0;locus=RLOC_00003492
ChrX	stalkie_big_nohaplotig	exon	60719992	60720471	98	-	.	Parent=comp119071_c0_seq1.mrna1;Target=comp119071_c0_seq1 4 483 -
ChrX	stalkie_big_nohaplotig	exon	60720527	60720594	100	-	.	Parent=comp119071_c0_seq1.mrna1;Target=comp119071_c0_seq1 484 551 -
ChrX	stalkie_big_nohaplotig	CDS	60720148	60720471	.	-	0	Parent=comp119071_c0_seq1.mrna1;Target=comp119071_c0_seq1 160 483 .
ChrX	stalkie_big_nohaplotig	CDS	60720527	60720544	.	-	0	Parent=comp119071_c0_seq1.mrna1;Target=comp119071_c0_seq1 484 501 .
ChrX	gffcl	locus	60738861	60739492	.	+	.	ID=RLOC_00003493;geneIDs=comp135178_c0_seq1.path1;transcripts=comp135178_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60738861	60739492	.	+	.	ID=comp135178_c0_seq1.mrna1;geneID=comp135178_c0_seq1.path1;Name=comp135178_c0_seq1;Dir=antisensecoverage=100.0;identity=98.2;matches=551;mismatches=9;indels=1;unknowns=0;Target=comp135178_c0_seq1 532 561 .;locus=RLOC_00003493
ChrX	stalkie_big_nohaplotig	exon	60738861	60738990	93	+	.	Parent=comp135178_c0_seq1.mrna1;Target=comp135178_c0_seq1 431 561 -
ChrX	stalkie_big_nohaplotig	exon	60739063	60739492	99	+	.	Parent=comp135178_c0_seq1.mrna1;Target=comp135178_c0_seq1 1 430 -
ChrX	stalkie_big_nohaplotig	CDS	60738861	60738889	.	+	0	Parent=comp135178_c0_seq1.mrna1
ChrX	gffcl	locus	60739760	60740792	.	.	.	ID=RLOC_00003494;geneIDs=FBgn0260939.3.path1,comp158904_c0_seq1.path1;transcripts=comp158904_c0_seq1.mrna1,FBgn0260939.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60739760	60740792	.	+	.	ID=comp158904_c0_seq1.mrna1;geneID=comp158904_c0_seq1.path1;Name=comp158904_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=1016;mismatches=17;indels=0;unknowns=0;Target=comp158904_c0_seq1 1033 1 .;CDS_Target=comp158904_c0_seq1 989 903 .;locus=RLOC_00003494
ChrX	stalkie_big_nohaplotig	exon	60739760	60740792	98	+	.	Parent=comp158904_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	60740662	60740748	.	+	0	Parent=comp158904_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60740014	60740716	.	-	.	ID=FBgn0260939.3.mrna1;geneID=FBgn0260939.3.path1;Name=FBgn0260939.3;Dir=sensecoverage=100.0;identity=98.8;matches=643;mismatches=8;indels=0;unknowns=0;locus=RLOC_00003494
ChrX	stalkie_big_nohaplotig	exon	60740014	60740065	100	-	.	Parent=FBgn0260939.3.mrna1;Target=FBgn0260939.3 600 651 +
ChrX	stalkie_big_nohaplotig	exon	60740118	60740716	98	-	.	Parent=FBgn0260939.3.mrna1;Target=FBgn0260939.3 1 599 +
ChrX	stalkie_big_nohaplotig	CDS	60740014	60740065	.	-	1	Parent=FBgn0260939.3.mrna1;Target=FBgn0260939.3 600 651 +
ChrX	stalkie_big_nohaplotig	CDS	60740118	60740716	.	-	0	Parent=FBgn0260939.3.mrna1;Target=FBgn0260939.3 1 599 +
ChrX	gffcl	locus	60749910	60750419	.	+	.	ID=RLOC_00003495;geneIDs=FBgn0000253.24.path1;transcripts=FBgn0000253.24.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60749910	60750419	.	+	.	ID=FBgn0000253.24.mrna1;geneID=FBgn0000253.24.path1;Name=FBgn0000253.24;Dir=indeterminatecoverage=100.0;identity=99.6;matches=508;mismatches=2;indels=0;unknowns=0;Target=FBgn0000253.24 510 1 .;locus=RLOC_00003495
ChrX	stalkie_big_nohaplotig	exon	60749910	60750419	99	+	.	Parent=FBgn0000253.24.mrna1
ChrX	stalkie_big_nohaplotig	CDS	60749910	60750419	.	+	0	Parent=FBgn0000253.24.mrna1
ChrX	gffcl	locus	60789755	60790162	.	-	.	ID=RLOC_00003496;geneIDs=comp59369_c0_seq1.path1;transcripts=comp59369_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60789755	60790162	.	-	.	ID=comp59369_c0_seq1.mrna1;geneID=comp59369_c0_seq1.path1;Name=comp59369_c0_seq1;Dir=indeterminatecoverage=97.9;identity=74.0;matches=305;mismatches=103;indels=4;unknowns=0;Target=comp59369_c0_seq1 416 5 .;CDS_Target=comp59369_c0_seq1 295 53 .;locus=RLOC_00003496
ChrX	stalkie_big_nohaplotig	exon	60789755	60790162	74	-	.	Parent=comp59369_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	60789872	60790114	.	-	0	Parent=comp59369_c0_seq1.mrna1
ChrX	gffcl	locus	60791065	60791525	.	+	.	ID=RLOC_00003497;geneIDs=comp621671_c0_seq1.path1;transcripts=comp621671_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60791065	60791525	.	+	.	ID=comp621671_c0_seq1.mrna1;geneID=comp621671_c0_seq1.path1;Name=comp621671_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.5;matches=432;mismatches=28;indels=2;unknowns=0;Target=comp621671_c0_seq1 461 1 .;CDS_Target=comp621671_c0_seq1 252 139 .;locus=RLOC_00003497
ChrX	stalkie_big_nohaplotig	exon	60791065	60791525	93	+	.	Parent=comp621671_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	60791203	60791316	.	+	0	Parent=comp621671_c0_seq1.mrna1
ChrX	gffcl	locus	60824505	60825850	.	-	.	ID=RLOC_00003498;geneIDs=comp153705_c0_seq1.path1;transcripts=comp153705_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60824505	60825850	.	-	.	ID=comp153705_c0_seq1.mrna1;geneID=comp153705_c0_seq1.path1;Name=comp153705_c0_seq1;Dir=antisensecoverage=97.9;identity=99.3;matches=1230;mismatches=5;indels=4;unknowns=0;Target=comp153705_c0_seq1 272 457 .;locus=RLOC_00003498
ChrX	stalkie_big_nohaplotig	exon	60824505	60825338	99	-	.	Parent=comp153705_c0_seq1.mrna1;Target=comp153705_c0_seq1 27 864 -
ChrX	stalkie_big_nohaplotig	exon	60825450	60825850	99	-	.	Parent=comp153705_c0_seq1.mrna1;Target=comp153705_c0_seq1 865 1265 -
ChrX	stalkie_big_nohaplotig	CDS	60824746	60824931	.	-	0	Parent=comp153705_c0_seq1.mrna1
ChrX	gffcl	locus	60826177	60826572	.	+	.	ID=RLOC_00003499;geneIDs=comp135125_c0_seq1.path1;transcripts=comp135125_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60826177	60826572	.	+	.	ID=comp135125_c0_seq1.mrna1;geneID=comp135125_c0_seq1.path1;Name=comp135125_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.7;matches=395;mismatches=1;indels=0;unknowns=0;Target=comp135125_c0_seq1 396 1 .;CDS_Target=comp135125_c0_seq1 347 252 .;locus=RLOC_00003499
ChrX	stalkie_big_nohaplotig	exon	60826177	60826572	99	+	.	Parent=comp135125_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	60826428	60826523	.	+	0	Parent=comp135125_c0_seq1.mrna1
ChrX	gffcl	locus	60888440	60889197	.	+	.	ID=RLOC_00003500;geneIDs=comp105924_c0_seq1.path1;transcripts=comp105924_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	60888440	60889197	.	+	.	ID=comp105924_c0_seq1.mrna1;geneID=comp105924_c0_seq1.path1;Name=comp105924_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.6;matches=755;mismatches=3;indels=0;unknowns=0;Target=comp105924_c0_seq1 758 1 .;CDS_Target=comp105924_c0_seq1 546 421 .;locus=RLOC_00003500
ChrX	stalkie_big_nohaplotig	exon	60888440	60889197	99	+	.	Parent=comp105924_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	60888860	60888985	.	+	0	Parent=comp105924_c0_seq1.mrna1
ChrX	gffcl	locus	61005845	61051113	.	+	.	ID=RLOC_00003502;geneIDs=FBgn0051708.1.path1;transcripts=FBgn0051708.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61005845	61051113	.	+	.	ID=FBgn0051708.1.mrna1;geneID=FBgn0051708.1.path1;Name=FBgn0051708.1;Dir=sensecoverage=80.1;identity=100.0;matches=915;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003502
ChrX	stalkie_big_nohaplotig	exon	61005845	61006063	100	+	.	Parent=FBgn0051708.1.mrna1;Target=FBgn0051708.1 5 223 +
ChrX	stalkie_big_nohaplotig	exon	61013393	61013551	100	+	.	Parent=FBgn0051708.1.mrna1;Target=FBgn0051708.1 224 382 +
ChrX	stalkie_big_nohaplotig	exon	61016527	61016655	100	+	.	Parent=FBgn0051708.1.mrna1;Target=FBgn0051708.1 383 511 +
ChrX	stalkie_big_nohaplotig	exon	61034680	61034830	100	+	.	Parent=FBgn0051708.1.mrna1;Target=FBgn0051708.1 512 662 +
ChrX	stalkie_big_nohaplotig	exon	61038534	61038676	100	+	.	Parent=FBgn0051708.1.mrna1;Target=FBgn0051708.1 663 805 +
ChrX	stalkie_big_nohaplotig	exon	61051000	61051113	100	+	.	Parent=FBgn0051708.1.mrna1;Target=FBgn0051708.1 806 919 +
ChrX	stalkie_big_nohaplotig	CDS	61005847	61006063	.	+	0	Parent=FBgn0051708.1.mrna1;Target=FBgn0051708.1 7 223 +
ChrX	stalkie_big_nohaplotig	CDS	61013393	61013551	.	+	2	Parent=FBgn0051708.1.mrna1;Target=FBgn0051708.1 224 382 +
ChrX	stalkie_big_nohaplotig	CDS	61016527	61016655	.	+	2	Parent=FBgn0051708.1.mrna1;Target=FBgn0051708.1 383 511 +
ChrX	stalkie_big_nohaplotig	CDS	61034680	61034830	.	+	2	Parent=FBgn0051708.1.mrna1;Target=FBgn0051708.1 512 662 +
ChrX	stalkie_big_nohaplotig	CDS	61038534	61038676	.	+	1	Parent=FBgn0051708.1.mrna1;Target=FBgn0051708.1 663 805 +
ChrX	stalkie_big_nohaplotig	CDS	61051000	61051113	.	+	2	Parent=FBgn0051708.1.mrna1;Target=FBgn0051708.1 806 919 +
ChrX	stalkie_big_nohaplotig	mRNA	61072482	61077331	.	+	.	ID=comp116885_c0_seq1.mrna1;geneID=comp116885_c0_seq1.path1;Name=comp116885_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=1077;mismatches=1;indels=0;unknowns=0;Target=comp116885_c0_seq1 86 160 .;locus=RLOC_00003503
ChrX	stalkie_big_nohaplotig	exon	61072482	61073536	99	+	.	Parent=comp116885_c0_seq1.mrna1;Target=comp116885_c0_seq1 24 1078 -
ChrX	stalkie_big_nohaplotig	exon	61077309	61077331	100	+	.	Parent=comp116885_c0_seq1.mrna1;Target=comp116885_c0_seq1 1 23 -
ChrX	stalkie_big_nohaplotig	CDS	61073400	61073474	.	+	0	Parent=comp116885_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61084663	61096029	.	+	.	ID=comp156343_c0_seq1.mrna1;geneID=comp156343_c0_seq1.path1;Name=comp156343_c0_seq1;Dir=antisensecoverage=99.7;identity=99.9;matches=1705;mismatches=1;indels=0;unknowns=0;Target=comp156343_c0_seq1 465 635 .;locus=RLOC_00003503
ChrX	stalkie_big_nohaplotig	exon	61084663	61084685	100	+	.	Parent=comp156343_c0_seq1.mrna1;Target=comp156343_c0_seq1 1689 1711 -
ChrX	stalkie_big_nohaplotig	exon	61093803	61094170	100	+	.	Parent=comp156343_c0_seq1.mrna1;Target=comp156343_c0_seq1 1321 1688 -
ChrX	stalkie_big_nohaplotig	exon	61094497	61094954	99	+	.	Parent=comp156343_c0_seq1.mrna1;Target=comp156343_c0_seq1 863 1320 -
ChrX	stalkie_big_nohaplotig	exon	61095173	61096029	100	+	.	Parent=comp156343_c0_seq1.mrna1;Target=comp156343_c0_seq1 6 862 -
ChrX	stalkie_big_nohaplotig	CDS	61095400	61095570	.	+	0	Parent=comp156343_c0_seq1.mrna1
ChrX	gffcl	locus	61085779	61086292	.	+	.	ID=RLOC_00003504;geneIDs=comp51468_c0_seq1.path1;transcripts=comp51468_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61085779	61086292	.	+	.	ID=comp51468_c0_seq1.mrna1;geneID=comp51468_c0_seq1.path1;Name=comp51468_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=513;mismatches=1;indels=0;unknowns=0;Target=comp51468_c0_seq1 514 1 .;CDS_Target=comp51468_c0_seq1 190 2 .;locus=RLOC_00003504
ChrX	stalkie_big_nohaplotig	exon	61085779	61086292	99	+	.	Parent=comp51468_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61085780	61085968	.	+	0	Parent=comp51468_c0_seq1.mrna1
ChrX	gffcl	locus	61087318	61089225	.	+	.	ID=RLOC_00003505;geneIDs=comp161568_c0_seq1.path1;transcripts=comp161568_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61087318	61089225	.	+	.	ID=comp161568_c0_seq1.mrna1;geneID=comp161568_c0_seq1.path1;Name=comp161568_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=1903;mismatches=5;indels=0;unknowns=0;Target=comp161568_c0_seq1 1908 1 .;CDS_Target=comp161568_c0_seq1 302 174 .;locus=RLOC_00003505
ChrX	stalkie_big_nohaplotig	exon	61087318	61089225	99	+	.	Parent=comp161568_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61087491	61087619	.	+	0	Parent=comp161568_c0_seq1.mrna1
ChrX	gffcl	locus	61105632	61106098	.	-	.	ID=RLOC_00003506;geneIDs=comp50565_c0_seq1.path1;transcripts=comp50565_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61105632	61106098	.	-	.	ID=comp50565_c0_seq1.mrna1;geneID=comp50565_c0_seq1.path1;Name=comp50565_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=466;mismatches=1;indels=2;unknowns=0;Target=comp50565_c0_seq1 469 1 .;CDS_Target=comp50565_c0_seq1 275 30 .;locus=RLOC_00003506
ChrX	stalkie_big_nohaplotig	exon	61105632	61106098	99	-	.	Parent=comp50565_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61105826	61106069	.	-	0	Parent=comp50565_c0_seq1.mrna1
ChrX	gffcl	locus	61106183	61106388	.	-	.	ID=RLOC_00003507;geneIDs=comp139939_c0_seq1.path1;transcripts=comp139939_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61106183	61106388	.	-	.	ID=comp139939_c0_seq1.mrna1;geneID=comp139939_c0_seq1.path1;Name=comp139939_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=206;mismatches=0;indels=0;unknowns=0;Target=comp139939_c0_seq1 206 1 .;CDS_Target=comp139939_c0_seq1 140 60 .;locus=RLOC_00003507
ChrX	stalkie_big_nohaplotig	exon	61106183	61106388	100	-	.	Parent=comp139939_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61106249	61106329	.	-	0	Parent=comp139939_c0_seq1.mrna1
ChrX	gffcl	locus	61107366	61107589	.	-	.	ID=RLOC_00003508;geneIDs=FBgn0051708.1.path2;transcripts=FBgn0051708.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	61107366	61107589	.	-	.	ID=FBgn0051708.1.mrna2;geneID=FBgn0051708.1.path2;Name=FBgn0051708.1;Dir=indeterminatecoverage=19.6;identity=100.0;matches=224;mismatches=0;indels=0;unknowns=0;Target=FBgn0051708.1 1143 920 .;locus=RLOC_00003508
ChrX	stalkie_big_nohaplotig	exon	61107366	61107589	100	-	.	Parent=FBgn0051708.1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	61107366	61107589	.	-	1	Parent=FBgn0051708.1.mrna2
ChrX	gffcl	locus	61120065	61126336	.	+	.	ID=RLOC_00003509;geneIDs=FBgn0001942.3.path1,comp130725_c0_seq1.path1;transcripts=FBgn0001942.3.mrna1,comp130725_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61120065	61126336	.	+	.	ID=FBgn0001942.3.mrna1;geneID=FBgn0001942.3.path1;Name=FBgn0001942.3;Dir=sensecoverage=100.0;identity=100.0;matches=1233;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003509
ChrX	stalkie_big_nohaplotig	exon	61120065	61120090	100	+	.	Parent=FBgn0001942.3.mrna1;Target=FBgn0001942.3 1 26 +
ChrX	stalkie_big_nohaplotig	exon	61122283	61122509	100	+	.	Parent=FBgn0001942.3.mrna1;Target=FBgn0001942.3 27 253 +
ChrX	stalkie_big_nohaplotig	exon	61124083	61124696	100	+	.	Parent=FBgn0001942.3.mrna1;Target=FBgn0001942.3 254 867 +
ChrX	stalkie_big_nohaplotig	exon	61125907	61126130	100	+	.	Parent=FBgn0001942.3.mrna1;Target=FBgn0001942.3 868 1091 +
ChrX	stalkie_big_nohaplotig	exon	61126195	61126336	100	+	.	Parent=FBgn0001942.3.mrna1;Target=FBgn0001942.3 1092 1233 +
ChrX	stalkie_big_nohaplotig	CDS	61120065	61120090	.	+	0	Parent=FBgn0001942.3.mrna1;Target=FBgn0001942.3 1 26 +
ChrX	stalkie_big_nohaplotig	CDS	61122283	61122509	.	+	1	Parent=FBgn0001942.3.mrna1;Target=FBgn0001942.3 27 253 +
ChrX	stalkie_big_nohaplotig	CDS	61124083	61124696	.	+	2	Parent=FBgn0001942.3.mrna1;Target=FBgn0001942.3 254 867 +
ChrX	stalkie_big_nohaplotig	CDS	61125907	61126130	.	+	0	Parent=FBgn0001942.3.mrna1;Target=FBgn0001942.3 868 1091 +
ChrX	stalkie_big_nohaplotig	CDS	61126195	61126336	.	+	1	Parent=FBgn0001942.3.mrna1;Target=FBgn0001942.3 1092 1233 +
ChrX	stalkie_big_nohaplotig	mRNA	61121670	61122304	.	+	.	ID=comp130725_c0_seq1.mrna1;geneID=comp130725_c0_seq1.path1;Name=comp130725_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=512;mismatches=0;indels=0;unknowns=0;Target=comp130725_c0_seq1 2 82 +;locus=RLOC_00003509
ChrX	stalkie_big_nohaplotig	exon	61121670	61122159	100	+	.	Parent=comp130725_c0_seq1.mrna1;Target=comp130725_c0_seq1 1 490 +
ChrX	stalkie_big_nohaplotig	exon	61122283	61122304	100	+	.	Parent=comp130725_c0_seq1.mrna1;Target=comp130725_c0_seq1 491 512 +
ChrX	stalkie_big_nohaplotig	CDS	61121671	61121751	.	+	0	Parent=comp130725_c0_seq1.mrna1
ChrX	gffcl	locus	61149506	61158077	.	+	.	ID=RLOC_00003510;geneIDs=FBgn0001941.1.path1;transcripts=FBgn0001941.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61149506	61158077	.	+	.	ID=FBgn0001941.1.mrna1;geneID=FBgn0001941.1.path1;Name=FBgn0001941.1;Dir=sensecoverage=100.0;identity=100.0;matches=972;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003510
ChrX	stalkie_big_nohaplotig	exon	61149506	61149912	100	+	.	Parent=FBgn0001941.1.mrna1;Target=FBgn0001941.1 1 407 +
ChrX	stalkie_big_nohaplotig	exon	61157513	61158077	100	+	.	Parent=FBgn0001941.1.mrna1;Target=FBgn0001941.1 408 972 +
ChrX	stalkie_big_nohaplotig	CDS	61149506	61149912	.	+	0	Parent=FBgn0001941.1.mrna1;Target=FBgn0001941.1 1 407 +
ChrX	stalkie_big_nohaplotig	CDS	61157513	61158077	.	+	1	Parent=FBgn0001941.1.mrna1;Target=FBgn0001941.1 408 972 +
ChrX	gffcl	locus	61158410	61158863	.	-	.	ID=RLOC_00003511;geneIDs=comp55377_c0_seq1.path1;transcripts=comp55377_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61158410	61158863	.	-	.	ID=comp55377_c0_seq1.mrna1;geneID=comp55377_c0_seq1.path1;Name=comp55377_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=453;mismatches=1;indels=0;unknowns=0;Target=comp55377_c0_seq1 454 1 .;CDS_Target=comp55377_c0_seq1 86 33 .;locus=RLOC_00003511
ChrX	stalkie_big_nohaplotig	exon	61158410	61158863	99	-	.	Parent=comp55377_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61158778	61158831	.	-	0	Parent=comp55377_c0_seq1.mrna1
ChrX	gffcl	locus	61165296	61165773	.	.	.	ID=RLOC_00003512;geneIDs=comp86554_c0_seq1.path1,comp204800_c0_seq1.path1;transcripts=comp204800_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61165485	61165773	.	+	.	ID=comp204800_c0_seq1.mrna1;geneID=comp204800_c0_seq1.path1;Name=comp204800_c0_seq1;Dir=antisensecoverage=98.2;identity=99.1;matches=215;mismatches=2;indels=0;unknowns=0;Target=comp204800_c0_seq1 52 93 .;locus=RLOC_00003512
ChrX	stalkie_big_nohaplotig	exon	61165485	61165679	98	+	.	Parent=comp204800_c0_seq1.mrna1;Target=comp204800_c0_seq1 23 217 -
ChrX	stalkie_big_nohaplotig	exon	61165752	61165773	100	+	.	Parent=comp204800_c0_seq1.mrna1;Target=comp204800_c0_seq1 1 22 -
ChrX	stalkie_big_nohaplotig	CDS	61165609	61165650	.	+	0	Parent=comp204800_c0_seq1.mrna1
ChrX	gffcl	locus	61165799	61176347	.	+	.	ID=RLOC_00003513;geneIDs=FBgn0000308.3.path1;transcripts=FBgn0000308.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61165799	61176347	.	+	.	ID=FBgn0000308.3.mrna1;geneID=FBgn0000308.3.path1;Name=FBgn0000308.3;Dir=sensecoverage=100.0;identity=100.0;matches=474;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003513
ChrX	stalkie_big_nohaplotig	exon	61165799	61166005	100	+	.	Parent=FBgn0000308.3.mrna1;Target=FBgn0000308.3 1 207 +
ChrX	stalkie_big_nohaplotig	exon	61171978	61172149	100	+	.	Parent=FBgn0000308.3.mrna1;Target=FBgn0000308.3 208 379 +
ChrX	stalkie_big_nohaplotig	exon	61176253	61176347	100	+	.	Parent=FBgn0000308.3.mrna1;Target=FBgn0000308.3 380 474 +
ChrX	stalkie_big_nohaplotig	CDS	61165799	61166005	.	+	0	Parent=FBgn0000308.3.mrna1;Target=FBgn0000308.3 1 207 +
ChrX	stalkie_big_nohaplotig	CDS	61171978	61172149	.	+	0	Parent=FBgn0000308.3.mrna1;Target=FBgn0000308.3 208 379 +
ChrX	stalkie_big_nohaplotig	CDS	61176253	61176347	.	+	2	Parent=FBgn0000308.3.mrna1;Target=FBgn0000308.3 380 474 +
ChrX	gffcl	locus	61166031	61166782	.	-	.	ID=RLOC_00003514;geneIDs=comp105656_c0_seq1.path1;transcripts=comp105656_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61166031	61166782	.	-	.	ID=comp105656_c0_seq1.mrna1;geneID=comp105656_c0_seq1.path1;Name=comp105656_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.9;matches=751;mismatches=1;indels=0;unknowns=0;Target=comp105656_c0_seq1 755 4 .;CDS_Target=comp105656_c0_seq1 217 116 .;locus=RLOC_00003514
ChrX	stalkie_big_nohaplotig	exon	61166031	61166782	99	-	.	Parent=comp105656_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61166569	61166670	.	-	0	Parent=comp105656_c0_seq1.mrna1
ChrX	gffcl	locus	61178693	61179563	.	-	.	ID=RLOC_00003515;geneIDs=comp135266_c0_seq1.path1;transcripts=comp135266_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61178693	61179563	.	-	.	ID=comp135266_c0_seq1.mrna1;geneID=comp135266_c0_seq1.path1;Name=comp135266_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=819;mismatches=0;indels=0;unknowns=0;Target=comp135266_c0_seq1 371 225 .;locus=RLOC_00003515
ChrX	stalkie_big_nohaplotig	exon	61178693	61179304	100	-	.	Parent=comp135266_c0_seq1.mrna1;Target=comp135266_c0_seq1 819 208 .
ChrX	stalkie_big_nohaplotig	exon	61179357	61179563	100	-	.	Parent=comp135266_c0_seq1.mrna1;Target=comp135266_c0_seq1 207 1 .
ChrX	stalkie_big_nohaplotig	CDS	61179141	61179287	.	-	0	Parent=comp135266_c0_seq1.mrna1
ChrX	gffcl	locus	61179933	61180423	.	+	.	ID=RLOC_00003516;geneIDs=comp136365_c0_seq1.path1;transcripts=comp136365_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61179933	61180423	.	+	.	ID=comp136365_c0_seq1.mrna1;geneID=comp136365_c0_seq1.path1;Name=comp136365_c0_seq1;Dir=indeterminatecoverage=95.6;identity=97.8;matches=489;mismatches=2;indels=9;unknowns=0;Target=comp136365_c0_seq1 500 1 .;CDS_Target=comp136365_c0_seq1 245 105 .;locus=RLOC_00003516
ChrX	stalkie_big_nohaplotig	exon	61179933	61180423	97	+	.	Parent=comp136365_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61180037	61180177	.	+	0	Parent=comp136365_c0_seq1.mrna1
ChrX	gffcl	locus	61181240	61181459	.	+	.	ID=RLOC_00003517;geneIDs=comp73801_c0_seq1.path1;transcripts=comp73801_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61181240	61181459	.	+	.	ID=comp73801_c0_seq1.mrna1;geneID=comp73801_c0_seq1.path1;Name=comp73801_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=220;mismatches=0;indels=0;unknowns=0;Target=comp73801_c0_seq1 220 1 .;CDS_Target=comp73801_c0_seq1 122 3 .;locus=RLOC_00003517
ChrX	stalkie_big_nohaplotig	exon	61181240	61181459	100	+	.	Parent=comp73801_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61181242	61181361	.	+	0	Parent=comp73801_c0_seq1.mrna1
ChrX	gffcl	locus	61184126	61187436	.	+	.	ID=RLOC_00003518;geneIDs=ORF61.path1;transcripts=ORF61.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61184126	61187436	.	+	.	ID=ORF61.mrna1;geneID=ORF61.path1;Name=ORF61;Dir=indeterminatecoverage=100.0;identity=100.0;matches=3311;mismatches=0;indels=1;unknowns=0;Target=ORF61 3312 1 .;locus=RLOC_00003518
ChrX	stalkie_big_nohaplotig	exon	61184126	61187436	99	+	.	Parent=ORF61.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61184126	61187436	.	+	0	Parent=ORF61.mrna1
ChrX	gffcl	locus	61190007	61191608	.	+	.	ID=RLOC_00003519;geneIDs=comp154038_c2_seq1.path1;transcripts=comp154038_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61190007	61191608	.	+	.	ID=comp154038_c2_seq1.mrna1;geneID=comp154038_c2_seq1.path1;Name=comp154038_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1602;mismatches=0;indels=1;unknowns=0;Target=comp154038_c2_seq1 1603 1 .;CDS_Target=comp154038_c2_seq1 1335 226 .;locus=RLOC_00003519
ChrX	stalkie_big_nohaplotig	exon	61190007	61191608	99	+	.	Parent=comp154038_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61190232	61191340	.	+	0	Parent=comp154038_c2_seq1.mrna1
ChrX	gffcl	locus	61191987	61193150	.	+	.	ID=RLOC_00003520;geneIDs=ORF1252.path1;transcripts=ORF1252.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61191987	61193150	.	+	.	ID=ORF1252.mrna1;geneID=ORF1252.path1;Name=ORF1252;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1164;mismatches=0;indels=0;unknowns=0;Target=ORF1252 1164 1 .;locus=RLOC_00003520
ChrX	stalkie_big_nohaplotig	exon	61191987	61193150	100	+	.	Parent=ORF1252.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61191987	61193150	.	+	0	Parent=ORF1252.mrna1
ChrX	gffcl	locus	61197516	61198059	.	-	.	ID=RLOC_00003521;geneIDs=comp116035_c0_seq1.path1;transcripts=comp116035_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61197516	61198059	.	-	.	ID=comp116035_c0_seq1.mrna1;geneID=comp116035_c0_seq1.path1;Name=comp116035_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=544;mismatches=0;indels=0;unknowns=0;Target=comp116035_c0_seq1 544 1 .;CDS_Target=comp116035_c0_seq1 468 1 .;locus=RLOC_00003521
ChrX	stalkie_big_nohaplotig	exon	61197516	61198059	100	-	.	Parent=comp116035_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61197592	61198059	.	-	0	Parent=comp116035_c0_seq1.mrna1
ChrX	gffcl	locus	61206167	61206928	.	+	.	ID=RLOC_00003522;geneIDs=FBgn0032213.2.path1;transcripts=FBgn0032213.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61206167	61206928	.	+	.	ID=FBgn0032213.2.mrna1;geneID=FBgn0032213.2.path1;Name=FBgn0032213.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=762;mismatches=0;indels=0;unknowns=0;Target=FBgn0032213.2 762 1 .;locus=RLOC_00003522
ChrX	stalkie_big_nohaplotig	exon	61206167	61206928	100	+	.	Parent=FBgn0032213.2.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61206167	61206928	.	+	0	Parent=FBgn0032213.2.mrna1
ChrX	gffcl	locus	61221043	61221403	.	+	.	ID=RLOC_00003523;geneIDs=comp129515_c0_seq1.path1;transcripts=comp129515_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61221043	61221403	.	+	.	ID=comp129515_c0_seq1.mrna1;geneID=comp129515_c0_seq1.path1;Name=comp129515_c0_seq1;Dir=indeterminatecoverage=97.8;identity=97.0;matches=350;mismatches=8;indels=3;unknowns=0;Target=comp129515_c0_seq1 358 1 .;CDS_Target=comp129515_c0_seq1 357 112 .;locus=RLOC_00003523
ChrX	stalkie_big_nohaplotig	exon	61221043	61221403	96	+	.	Parent=comp129515_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61221154	61221402	.	+	0	Parent=comp129515_c0_seq1.mrna1
ChrX	gffcl	locus	61221427	61221835	.	+	.	ID=RLOC_00003524;geneIDs=comp114744_c0_seq1.path1;transcripts=comp114744_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61221427	61221835	.	+	.	ID=comp114744_c0_seq1.mrna1;geneID=comp114744_c0_seq1.path1;Name=comp114744_c0_seq1;Dir=indeterminatecoverage=93.0;identity=99.8;matches=408;mismatches=1;indels=0;unknowns=0;Target=comp114744_c0_seq1 409 1 .;CDS_Target=comp114744_c0_seq1 339 1 .;locus=RLOC_00003524
ChrX	stalkie_big_nohaplotig	exon	61221427	61221835	99	+	.	Parent=comp114744_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61221427	61221765	.	+	0	Parent=comp114744_c0_seq1.mrna1
ChrX	gffcl	locus	61225359	61226601	.	-	.	ID=RLOC_00003525;geneIDs=FBgn0032521.path1;transcripts=FBgn0032521.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61225359	61226601	.	-	.	ID=FBgn0032521.mrna1;geneID=FBgn0032521.path1;Name=FBgn0032521;Dir=sensecoverage=100.0;identity=100.0;matches=1176;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003525
ChrX	stalkie_big_nohaplotig	exon	61225359	61225943	100	-	.	Parent=FBgn0032521.mrna1;Target=FBgn0032521 592 1176 +
ChrX	stalkie_big_nohaplotig	exon	61226011	61226601	100	-	.	Parent=FBgn0032521.mrna1;Target=FBgn0032521 1 591 +
ChrX	stalkie_big_nohaplotig	CDS	61225359	61225943	.	-	0	Parent=FBgn0032521.mrna1;Target=FBgn0032521 592 1176 +
ChrX	stalkie_big_nohaplotig	CDS	61226011	61226601	.	-	0	Parent=FBgn0032521.mrna1;Target=FBgn0032521 1 591 +
ChrX	gffcl	locus	61236439	61239080	.	+	.	ID=RLOC_00003526;geneIDs=comp149087_c0_seq1.path1,comp178454_c0_seq1.path1;transcripts=comp149087_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61237401	61239080	.	+	.	ID=comp149087_c0_seq1.mrna1;geneID=comp149087_c0_seq1.path1;Name=comp149087_c0_seq1;Dir=indeterminatecoverage=98.9;identity=100.0;matches=1680;mismatches=0;indels=0;unknowns=0;Target=comp149087_c0_seq1 1680 1 .;CDS_Target=comp149087_c0_seq1 1554 1396 .;locus=RLOC_00003526
ChrX	stalkie_big_nohaplotig	exon	61237401	61239080	100	+	.	Parent=comp149087_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61238796	61238954	.	+	0	Parent=comp149087_c0_seq1.mrna1
ChrX	gffcl	locus	61240137	61281521	.	-	.	ID=RLOC_00003527;geneIDs=FBgn0263354.1.path1;transcripts=FBgn0263354.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61240137	61281521	.	-	.	ID=FBgn0263354.1.mrna1;geneID=FBgn0263354.1.path1;Name=FBgn0263354.1;Dir=sensecoverage=100.0;identity=100.0;matches=2859;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003527
ChrX	stalkie_big_nohaplotig	exon	61240137	61240564	100	-	.	Parent=FBgn0263354.1.mrna1;Target=FBgn0263354.1 2432 2859 +
ChrX	stalkie_big_nohaplotig	exon	61240636	61241358	100	-	.	Parent=FBgn0263354.1.mrna1;Target=FBgn0263354.1 1709 2431 +
ChrX	stalkie_big_nohaplotig	exon	61241427	61241589	100	-	.	Parent=FBgn0263354.1.mrna1;Target=FBgn0263354.1 1546 1708 +
ChrX	stalkie_big_nohaplotig	exon	61242734	61242912	100	-	.	Parent=FBgn0263354.1.mrna1;Target=FBgn0263354.1 1367 1545 +
ChrX	stalkie_big_nohaplotig	exon	61246264	61246462	100	-	.	Parent=FBgn0263354.1.mrna1;Target=FBgn0263354.1 1168 1366 +
ChrX	stalkie_big_nohaplotig	exon	61246534	61246641	100	-	.	Parent=FBgn0263354.1.mrna1;Target=FBgn0263354.1 1060 1167 +
ChrX	stalkie_big_nohaplotig	exon	61280463	61281521	100	-	.	Parent=FBgn0263354.1.mrna1;Target=FBgn0263354.1 1 1059 +
ChrX	stalkie_big_nohaplotig	CDS	61240137	61240564	.	-	2	Parent=FBgn0263354.1.mrna1;Target=FBgn0263354.1 2432 2859 +
ChrX	stalkie_big_nohaplotig	CDS	61240636	61241358	.	-	2	Parent=FBgn0263354.1.mrna1;Target=FBgn0263354.1 1709 2431 +
ChrX	stalkie_big_nohaplotig	CDS	61241427	61241589	.	-	0	Parent=FBgn0263354.1.mrna1;Target=FBgn0263354.1 1546 1708 +
ChrX	stalkie_big_nohaplotig	CDS	61242734	61242912	.	-	2	Parent=FBgn0263354.1.mrna1;Target=FBgn0263354.1 1367 1545 +
ChrX	stalkie_big_nohaplotig	CDS	61246264	61246462	.	-	0	Parent=FBgn0263354.1.mrna1;Target=FBgn0263354.1 1168 1366 +
ChrX	stalkie_big_nohaplotig	CDS	61246534	61246641	.	-	0	Parent=FBgn0263354.1.mrna1;Target=FBgn0263354.1 1060 1167 +
ChrX	stalkie_big_nohaplotig	CDS	61280463	61281521	.	-	0	Parent=FBgn0263354.1.mrna1;Target=FBgn0263354.1 1 1059 +
ChrX	gffcl	locus	61319569	61321011	.	+	.	ID=RLOC_00003528;geneIDs=FBgn0032524.1.path1;transcripts=FBgn0032524.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61319569	61321011	.	+	.	ID=FBgn0032524.1.mrna1;geneID=FBgn0032524.1.path1;Name=FBgn0032524.1;Dir=sensecoverage=100.0;identity=100.0;matches=1218;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003528
ChrX	stalkie_big_nohaplotig	exon	61319569	61319775	100	+	.	Parent=FBgn0032524.1.mrna1;Target=FBgn0032524.1 1 207 +
ChrX	stalkie_big_nohaplotig	exon	61319835	61319951	100	+	.	Parent=FBgn0032524.1.mrna1;Target=FBgn0032524.1 208 324 +
ChrX	stalkie_big_nohaplotig	exon	61320014	61320245	100	+	.	Parent=FBgn0032524.1.mrna1;Target=FBgn0032524.1 325 556 +
ChrX	stalkie_big_nohaplotig	exon	61320298	61320643	100	+	.	Parent=FBgn0032524.1.mrna1;Target=FBgn0032524.1 557 902 +
ChrX	stalkie_big_nohaplotig	exon	61320696	61321011	100	+	.	Parent=FBgn0032524.1.mrna1;Target=FBgn0032524.1 903 1218 +
ChrX	stalkie_big_nohaplotig	CDS	61319569	61319775	.	+	0	Parent=FBgn0032524.1.mrna1;Target=FBgn0032524.1 1 207 +
ChrX	stalkie_big_nohaplotig	CDS	61319835	61319951	.	+	0	Parent=FBgn0032524.1.mrna1;Target=FBgn0032524.1 208 324 +
ChrX	stalkie_big_nohaplotig	CDS	61320014	61320245	.	+	0	Parent=FBgn0032524.1.mrna1;Target=FBgn0032524.1 325 556 +
ChrX	stalkie_big_nohaplotig	CDS	61320298	61320643	.	+	2	Parent=FBgn0032524.1.mrna1;Target=FBgn0032524.1 557 902 +
ChrX	stalkie_big_nohaplotig	CDS	61320696	61321011	.	+	1	Parent=FBgn0032524.1.mrna1;Target=FBgn0032524.1 903 1218 +
ChrX	gffcl	locus	61342225	61344867	.	+	.	ID=RLOC_00003530;geneIDs=comp154617_c0_seq1.path1;transcripts=comp154617_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61342225	61344867	.	+	.	ID=comp154617_c0_seq1.mrna1;geneID=comp154617_c0_seq1.path1;Name=comp154617_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2643;mismatches=0;indels=1;unknowns=0;Target=comp154617_c0_seq1 2644 1 .;CDS_Target=comp154617_c0_seq1 836 648 .;locus=RLOC_00003530
ChrX	stalkie_big_nohaplotig	exon	61342225	61344867	99	+	.	Parent=comp154617_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61342872	61343060	.	+	0	Parent=comp154617_c0_seq1.mrna1
ChrX	gffcl	locus	61348958	61349769	.	+	.	ID=RLOC_00003531;geneIDs=comp161813_c1_seq1.path1;transcripts=comp161813_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61348958	61349769	.	+	.	ID=comp161813_c1_seq1.mrna1;geneID=comp161813_c1_seq1.path1;Name=comp161813_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=812;mismatches=0;indels=0;unknowns=0;Target=comp161813_c1_seq1 812 1 .;CDS_Target=comp161813_c1_seq1 156 85 .;locus=RLOC_00003531
ChrX	stalkie_big_nohaplotig	exon	61348958	61349769	100	+	.	Parent=comp161813_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61349042	61349113	.	+	0	Parent=comp161813_c1_seq1.mrna1
ChrX	gffcl	locus	61355609	61359133	.	.	.	ID=RLOC_00003532;geneIDs=FBgn0021967.1.path1,comp155803_c0_seq1.path1;transcripts=FBgn0021967.1.mrna1,comp155803_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61355609	61359133	.	+	.	ID=FBgn0021967.1.mrna1;geneID=FBgn0021967.1.path1;Name=FBgn0021967.1;Dir=sensecoverage=100.0;identity=100.0;matches=492;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003532
ChrX	stalkie_big_nohaplotig	exon	61355609	61355699	100	+	.	Parent=FBgn0021967.1.mrna1;Target=FBgn0021967.1 1 91 +
ChrX	stalkie_big_nohaplotig	exon	61356159	61356434	100	+	.	Parent=FBgn0021967.1.mrna1;Target=FBgn0021967.1 92 367 +
ChrX	stalkie_big_nohaplotig	exon	61359009	61359133	100	+	.	Parent=FBgn0021967.1.mrna1;Target=FBgn0021967.1 368 492 +
ChrX	stalkie_big_nohaplotig	CDS	61355609	61355699	.	+	0	Parent=FBgn0021967.1.mrna1;Target=FBgn0021967.1 1 91 +
ChrX	stalkie_big_nohaplotig	CDS	61356159	61356434	.	+	2	Parent=FBgn0021967.1.mrna1;Target=FBgn0021967.1 92 367 +
ChrX	stalkie_big_nohaplotig	CDS	61359009	61359133	.	+	2	Parent=FBgn0021967.1.mrna1;Target=FBgn0021967.1 368 492 +
ChrX	stalkie_big_nohaplotig	mRNA	61357507	61359031	.	-	.	ID=comp155803_c0_seq1.mrna1;geneID=comp155803_c0_seq1.path1;Name=comp155803_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1519;mismatches=6;indels=2;unknowns=0;Target=comp155803_c0_seq1 1527 1 .;CDS_Target=comp155803_c0_seq1 176 144 .;locus=RLOC_00003532
ChrX	stalkie_big_nohaplotig	exon	61357507	61359031	99	-	.	Parent=comp155803_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61358856	61358888	.	-	0	Parent=comp155803_c0_seq1.mrna1
ChrX	gffcl	locus	61361736	61364065	.	-	.	ID=RLOC_00003533;geneIDs=FBgn0031540.1.path1;transcripts=FBgn0031540.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61361736	61364065	.	-	.	ID=FBgn0031540.1.mrna1;geneID=FBgn0031540.1.path1;Name=FBgn0031540.1;Dir=sensecoverage=100.0;identity=100.0;matches=2001;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003533
ChrX	stalkie_big_nohaplotig	exon	61361736	61362773	100	-	.	Parent=FBgn0031540.1.mrna1;Target=FBgn0031540.1 964 2001 +
ChrX	stalkie_big_nohaplotig	exon	61363040	61363200	100	-	.	Parent=FBgn0031540.1.mrna1;Target=FBgn0031540.1 803 963 +
ChrX	stalkie_big_nohaplotig	exon	61363264	61364065	100	-	.	Parent=FBgn0031540.1.mrna1;Target=FBgn0031540.1 1 802 +
ChrX	stalkie_big_nohaplotig	CDS	61361736	61362773	.	-	0	Parent=FBgn0031540.1.mrna1;Target=FBgn0031540.1 964 2001 +
ChrX	stalkie_big_nohaplotig	CDS	61363040	61363200	.	-	2	Parent=FBgn0031540.1.mrna1;Target=FBgn0031540.1 803 963 +
ChrX	stalkie_big_nohaplotig	CDS	61363264	61364065	.	-	0	Parent=FBgn0031540.1.mrna1;Target=FBgn0031540.1 1 802 +
ChrX	gffcl	locus	61373285	61376167	.	-	.	ID=RLOC_00003534;geneIDs=FBgn0020622.1.path1;transcripts=FBgn0020622.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61373285	61376167	.	-	.	ID=FBgn0020622.1.mrna1;geneID=FBgn0020622.1.path1;Name=FBgn0020622.1;Dir=sensecoverage=100.0;identity=100.0;matches=1593;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003534
ChrX	stalkie_big_nohaplotig	exon	61373285	61373996	100	-	.	Parent=FBgn0020622.1.mrna1;Target=FBgn0020622.1 882 1593 +
ChrX	stalkie_big_nohaplotig	exon	61375161	61376025	100	-	.	Parent=FBgn0020622.1.mrna1;Target=FBgn0020622.1 17 881 +
ChrX	stalkie_big_nohaplotig	exon	61376152	61376167	100	-	.	Parent=FBgn0020622.1.mrna1;Target=FBgn0020622.1 1 16 +
ChrX	stalkie_big_nohaplotig	CDS	61373285	61373996	.	-	1	Parent=FBgn0020622.1.mrna1;Target=FBgn0020622.1 882 1593 +
ChrX	stalkie_big_nohaplotig	CDS	61375161	61376025	.	-	2	Parent=FBgn0020622.1.mrna1;Target=FBgn0020622.1 17 881 +
ChrX	stalkie_big_nohaplotig	CDS	61376152	61376167	.	-	0	Parent=FBgn0020622.1.mrna1;Target=FBgn0020622.1 1 16 +
ChrX	gffcl	locus	61415089	61432223	.	-	.	ID=RLOC_00003536;geneIDs=FBgn0085450.1.path1;transcripts=FBgn0085450.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61415089	61432223	.	-	.	ID=FBgn0085450.1.mrna1;geneID=FBgn0085450.1.path1;Name=FBgn0085450.1;Dir=sensecoverage=100.0;identity=100.0;matches=2226;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003536
ChrX	stalkie_big_nohaplotig	exon	61415089	61416138	100	-	.	Parent=FBgn0085450.1.mrna1;Target=FBgn0085450.1 1177 2226 +
ChrX	stalkie_big_nohaplotig	exon	61431048	61432223	100	-	.	Parent=FBgn0085450.1.mrna1;Target=FBgn0085450.1 1 1176 +
ChrX	stalkie_big_nohaplotig	CDS	61415089	61416138	.	-	0	Parent=FBgn0085450.1.mrna1;Target=FBgn0085450.1 1177 2226 +
ChrX	stalkie_big_nohaplotig	CDS	61431048	61432223	.	-	0	Parent=FBgn0085450.1.mrna1;Target=FBgn0085450.1 1 1176 +
ChrX	stalkie_big_nohaplotig	mRNA	61475999	61477391	.	-	.	ID=comp155168_c1_seq1.mrna1;geneID=comp155168_c1_seq1.path1;Name=comp155168_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1388;mismatches=4;indels=3;unknowns=0;Target=comp155168_c1_seq1 1394 1 .;CDS_Target=comp155168_c1_seq1 955 731 .;locus=RLOC_00003537
ChrX	stalkie_big_nohaplotig	exon	61475999	61477391	99	-	.	Parent=comp155168_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61476437	61476661	.	-	0	Parent=comp155168_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61528646	61529452	.	+	.	ID=comp114930_c0_seq1.mrna1;geneID=comp114930_c0_seq1.path1;Name=comp114930_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=807;mismatches=0;indels=0;unknowns=0;Target=comp114930_c0_seq1 807 1 .;CDS_Target=comp114930_c0_seq1 288 106 .;locus=RLOC_00003537
ChrX	stalkie_big_nohaplotig	exon	61528646	61529452	100	+	.	Parent=comp114930_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61528751	61528933	.	+	0	Parent=comp114930_c0_seq1.mrna1
ChrX	gffcl	locus	61474625	61474949	.	-	.	ID=RLOC_00003538;geneIDs=comp143540_c0_seq1.path1;transcripts=comp143540_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61474625	61474949	.	-	.	ID=comp143540_c0_seq1.mrna1;geneID=comp143540_c0_seq1.path1;Name=comp143540_c0_seq1;Dir=indeterminatecoverage=92.3;identity=100.0;matches=325;mismatches=0;indels=0;unknowns=0;Target=comp143540_c0_seq1 352 28 .;CDS_Target=comp143540_c0_seq1 159 100 .;locus=RLOC_00003538
ChrX	stalkie_big_nohaplotig	exon	61474625	61474949	100	-	.	Parent=comp143540_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61474818	61474877	.	-	0	Parent=comp143540_c0_seq1.mrna1
ChrX	gffcl	locus	61477631	61485296	.	-	.	ID=RLOC_00003539;geneIDs=comp160345_c0_seq1.path1;transcripts=comp160345_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61477631	61485296	.	-	.	ID=comp160345_c0_seq1.mrna1;geneID=comp160345_c0_seq1.path1;Name=comp160345_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=4467;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003539
ChrX	stalkie_big_nohaplotig	exon	61477631	61479065	100	-	.	Parent=comp160345_c0_seq1.mrna1;Target=comp160345_c0_seq1 3033 4467 +
ChrX	stalkie_big_nohaplotig	exon	61480904	61481392	100	-	.	Parent=comp160345_c0_seq1.mrna1;Target=comp160345_c0_seq1 2544 3032 +
ChrX	stalkie_big_nohaplotig	exon	61482754	61485296	100	-	.	Parent=comp160345_c0_seq1.mrna1;Target=comp160345_c0_seq1 1 2543 +
ChrX	stalkie_big_nohaplotig	CDS	61479034	61479065	.	-	2	Parent=comp160345_c0_seq1.mrna1;Target=comp160345_c0_seq1 3033 3064 +
ChrX	stalkie_big_nohaplotig	CDS	61480904	61481392	.	-	2	Parent=comp160345_c0_seq1.mrna1;Target=comp160345_c0_seq1 2544 3032 +
ChrX	stalkie_big_nohaplotig	CDS	61482754	61485295	.	-	0	Parent=comp160345_c0_seq1.mrna1;Target=comp160345_c0_seq1 2 2543 +
ChrX	gffcl	locus	61486294	61487688	.	+	.	ID=RLOC_00003540;geneIDs=comp163705_c1_seq1.path2;transcripts=comp163705_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	61486294	61487688	.	+	.	ID=comp163705_c1_seq1.mrna2;geneID=comp163705_c1_seq1.path2;Name=comp163705_c1_seq1;Dir=indeterminatecoverage=18.5;identity=100.0;matches=1395;mismatches=0;indels=0;unknowns=0;Target=comp163705_c1_seq1 7534 6140 .;locus=RLOC_00003540
ChrX	stalkie_big_nohaplotig	exon	61486294	61487688	100	+	.	Parent=comp163705_c1_seq1.mrna2
ChrX	gffcl	locus	61492716	61493251	.	-	.	ID=RLOC_00003541;geneIDs=comp137765_c0_seq1.path1;transcripts=comp137765_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61492716	61493251	.	-	.	ID=comp137765_c0_seq1.mrna1;geneID=comp137765_c0_seq1.path1;Name=comp137765_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=431;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003541
ChrX	stalkie_big_nohaplotig	exon	61492716	61492910	100	-	.	Parent=comp137765_c0_seq1.mrna1;Target=comp137765_c0_seq1 240 434 +
ChrX	stalkie_big_nohaplotig	exon	61492951	61493103	98	-	.	Parent=comp137765_c0_seq1.mrna1;Target=comp137765_c0_seq1 87 239 +
ChrX	stalkie_big_nohaplotig	exon	61493166	61493251	98	-	.	Parent=comp137765_c0_seq1.mrna1;Target=comp137765_c0_seq1 1 86 +
ChrX	stalkie_big_nohaplotig	CDS	61492882	61492910	.	-	2	Parent=comp137765_c0_seq1.mrna1;Target=comp137765_c0_seq1 240 268 +
ChrX	stalkie_big_nohaplotig	CDS	61492951	61493103	.	-	2	Parent=comp137765_c0_seq1.mrna1;Target=comp137765_c0_seq1 87 239 +
ChrX	stalkie_big_nohaplotig	CDS	61493166	61493250	.	-	0	Parent=comp137765_c0_seq1.mrna1;Target=comp137765_c0_seq1 2 86 +
ChrX	gffcl	locus	61497867	61498785	.	+	.	ID=RLOC_00003542;geneIDs=comp94931_c0_seq1.path1;transcripts=comp94931_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61497867	61498785	.	+	.	ID=comp94931_c0_seq1.mrna1;geneID=comp94931_c0_seq1.path1;Name=comp94931_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.9;matches=918;mismatches=0;indels=1;unknowns=0;Target=comp94931_c0_seq1 921 4 .;CDS_Target=comp94931_c0_seq1 398 276 .;locus=RLOC_00003542
ChrX	stalkie_big_nohaplotig	exon	61497867	61498785	99	+	.	Parent=comp94931_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61498140	61498262	.	+	0	Parent=comp94931_c0_seq1.mrna1
ChrX	gffcl	locus	61504518	61517993	.	+	.	ID=RLOC_00003543;geneIDs=FBgn0032395.1.path1;transcripts=FBgn0032395.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61504518	61517993	.	+	.	ID=FBgn0032395.1.mrna1;geneID=FBgn0032395.1.path1;Name=FBgn0032395.1;Dir=sensecoverage=100.0;identity=100.0;matches=6078;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003543
ChrX	stalkie_big_nohaplotig	exon	61504518	61505100	100	+	.	Parent=FBgn0032395.1.mrna1;Target=FBgn0032395.1 1 583 +
ChrX	stalkie_big_nohaplotig	exon	61505153	61505889	100	+	.	Parent=FBgn0032395.1.mrna1;Target=FBgn0032395.1 584 1320 +
ChrX	stalkie_big_nohaplotig	exon	61505947	61506290	100	+	.	Parent=FBgn0032395.1.mrna1;Target=FBgn0032395.1 1321 1664 +
ChrX	stalkie_big_nohaplotig	exon	61507808	61509597	100	+	.	Parent=FBgn0032395.1.mrna1;Target=FBgn0032395.1 1665 3454 +
ChrX	stalkie_big_nohaplotig	exon	61509653	61510393	100	+	.	Parent=FBgn0032395.1.mrna1;Target=FBgn0032395.1 3455 4195 +
ChrX	stalkie_big_nohaplotig	exon	61512380	61512555	100	+	.	Parent=FBgn0032395.1.mrna1;Target=FBgn0032395.1 4196 4371 +
ChrX	stalkie_big_nohaplotig	exon	61512610	61513491	100	+	.	Parent=FBgn0032395.1.mrna1;Target=FBgn0032395.1 4372 5253 +
ChrX	stalkie_big_nohaplotig	exon	61517083	61517675	100	+	.	Parent=FBgn0032395.1.mrna1;Target=FBgn0032395.1 5254 5846 +
ChrX	stalkie_big_nohaplotig	exon	61517762	61517993	100	+	.	Parent=FBgn0032395.1.mrna1;Target=FBgn0032395.1 5847 6078 +
ChrX	stalkie_big_nohaplotig	CDS	61504518	61505100	.	+	0	Parent=FBgn0032395.1.mrna1;Target=FBgn0032395.1 1 583 +
ChrX	stalkie_big_nohaplotig	CDS	61505153	61505889	.	+	2	Parent=FBgn0032395.1.mrna1;Target=FBgn0032395.1 584 1320 +
ChrX	stalkie_big_nohaplotig	CDS	61505947	61506290	.	+	0	Parent=FBgn0032395.1.mrna1;Target=FBgn0032395.1 1321 1664 +
ChrX	stalkie_big_nohaplotig	CDS	61507808	61509597	.	+	1	Parent=FBgn0032395.1.mrna1;Target=FBgn0032395.1 1665 3454 +
ChrX	stalkie_big_nohaplotig	CDS	61509653	61510393	.	+	2	Parent=FBgn0032395.1.mrna1;Target=FBgn0032395.1 3455 4195 +
ChrX	stalkie_big_nohaplotig	CDS	61512380	61512555	.	+	2	Parent=FBgn0032395.1.mrna1;Target=FBgn0032395.1 4196 4371 +
ChrX	stalkie_big_nohaplotig	CDS	61512610	61513491	.	+	0	Parent=FBgn0032395.1.mrna1;Target=FBgn0032395.1 4372 5253 +
ChrX	stalkie_big_nohaplotig	CDS	61517083	61517675	.	+	0	Parent=FBgn0032395.1.mrna1;Target=FBgn0032395.1 5254 5846 +
ChrX	stalkie_big_nohaplotig	CDS	61517762	61517993	.	+	1	Parent=FBgn0032395.1.mrna1;Target=FBgn0032395.1 5847 6078 +
ChrX	gffcl	locus	61532086	61532461	.	-	.	ID=RLOC_00003544;geneIDs=comp118890_c0_seq1.path1;transcripts=comp118890_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61532086	61532461	.	-	.	ID=comp118890_c0_seq1.mrna1;geneID=comp118890_c0_seq1.path1;Name=comp118890_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=376;mismatches=0;indels=0;unknowns=0;Target=comp118890_c0_seq1 376 1 .;CDS_Target=comp118890_c0_seq1 80 3 .;locus=RLOC_00003544
ChrX	stalkie_big_nohaplotig	exon	61532086	61532461	100	-	.	Parent=comp118890_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61532382	61532459	.	-	0	Parent=comp118890_c0_seq1.mrna1
ChrX	gffcl	locus	61548023	61559091	.	+	.	ID=RLOC_00003546;geneIDs=FBgn0002938.1.path1;transcripts=FBgn0002938.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61548023	61559091	.	+	.	ID=FBgn0002938.1.mrna1;geneID=FBgn0002938.1.path1;Name=FBgn0002938.1;Dir=sensecoverage=100.0;identity=100.0;matches=3471;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003546
ChrX	stalkie_big_nohaplotig	exon	61548023	61548072	100	+	.	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 1 50 +
ChrX	stalkie_big_nohaplotig	exon	61550514	61550820	100	+	.	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 51 357 +
ChrX	stalkie_big_nohaplotig	exon	61551006	61551309	100	+	.	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 358 661 +
ChrX	stalkie_big_nohaplotig	exon	61551370	61551650	100	+	.	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 662 942 +
ChrX	stalkie_big_nohaplotig	exon	61552545	61552823	100	+	.	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 943 1221 +
ChrX	stalkie_big_nohaplotig	exon	61552879	61553267	100	+	.	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 1222 1610 +
ChrX	stalkie_big_nohaplotig	exon	61553325	61553873	100	+	.	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 1611 2159 +
ChrX	stalkie_big_nohaplotig	exon	61554719	61554869	100	+	.	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 2160 2310 +
ChrX	stalkie_big_nohaplotig	exon	61554931	61555072	100	+	.	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 2311 2452 +
ChrX	stalkie_big_nohaplotig	exon	61555140	61555414	100	+	.	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 2453 2727 +
ChrX	stalkie_big_nohaplotig	exon	61555471	61555757	100	+	.	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 2728 3014 +
ChrX	stalkie_big_nohaplotig	exon	61555819	61555968	100	+	.	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 3015 3164 +
ChrX	stalkie_big_nohaplotig	exon	61556061	61556158	100	+	.	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 3165 3262 +
ChrX	stalkie_big_nohaplotig	exon	61558883	61559091	100	+	.	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 3263 3471 +
ChrX	stalkie_big_nohaplotig	CDS	61548023	61548072	.	+	0	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 1 50 +
ChrX	stalkie_big_nohaplotig	CDS	61550514	61550820	.	+	1	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 51 357 +
ChrX	stalkie_big_nohaplotig	CDS	61551006	61551309	.	+	0	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 358 661 +
ChrX	stalkie_big_nohaplotig	CDS	61551370	61551650	.	+	2	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 662 942 +
ChrX	stalkie_big_nohaplotig	CDS	61552545	61552823	.	+	0	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 943 1221 +
ChrX	stalkie_big_nohaplotig	CDS	61552879	61553267	.	+	0	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 1222 1610 +
ChrX	stalkie_big_nohaplotig	CDS	61553325	61553873	.	+	1	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 1611 2159 +
ChrX	stalkie_big_nohaplotig	CDS	61554719	61554869	.	+	1	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 2160 2310 +
ChrX	stalkie_big_nohaplotig	CDS	61554931	61555072	.	+	0	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 2311 2452 +
ChrX	stalkie_big_nohaplotig	CDS	61555140	61555414	.	+	2	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 2453 2727 +
ChrX	stalkie_big_nohaplotig	CDS	61555471	61555757	.	+	0	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 2728 3014 +
ChrX	stalkie_big_nohaplotig	CDS	61555819	61555968	.	+	1	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 3015 3164 +
ChrX	stalkie_big_nohaplotig	CDS	61556061	61556158	.	+	1	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 3165 3262 +
ChrX	stalkie_big_nohaplotig	CDS	61558883	61559091	.	+	2	Parent=FBgn0002938.1.mrna1;Target=FBgn0002938.1 3263 3471 +
ChrX	gffcl	locus	61549581	61550071	.	+	.	ID=RLOC_00003547;geneIDs=comp148374_c0_seq1.path1;transcripts=comp148374_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61549581	61550071	.	+	.	ID=comp148374_c0_seq1.mrna1;geneID=comp148374_c0_seq1.path1;Name=comp148374_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=487;mismatches=4;indels=8;unknowns=0;Target=comp148374_c0_seq1 499 1 .;CDS_Target=comp148374_c0_seq1 386 327 .;locus=RLOC_00003547
ChrX	stalkie_big_nohaplotig	exon	61549581	61550071	97	+	.	Parent=comp148374_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61549899	61549958	.	+	0	Parent=comp148374_c0_seq1.mrna1
ChrX	gffcl	locus	61556325	61556628	.	-	.	ID=RLOC_00003548;geneIDs=comp118885_c0_seq1.path1;transcripts=comp118885_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61556325	61556628	.	-	.	ID=comp118885_c0_seq1.mrna1;geneID=comp118885_c0_seq1.path1;Name=comp118885_c0_seq1;Dir=indeterminatecoverage=81.1;identity=98.7;matches=300;mismatches=4;indels=0;unknowns=0;Target=comp118885_c0_seq1 304 1 .;CDS_Target=comp118885_c0_seq1 74 3 .;locus=RLOC_00003548
ChrX	stalkie_big_nohaplotig	exon	61556325	61556628	98	-	.	Parent=comp118885_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61556555	61556626	.	-	0	Parent=comp118885_c0_seq1.mrna1
ChrX	gffcl	locus	61557037	61557310	.	-	.	ID=RLOC_00003549;geneIDs=comp146276_c0_seq1.path1;transcripts=comp146276_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61557037	61557310	.	-	.	ID=comp146276_c0_seq1.mrna1;geneID=comp146276_c0_seq1.path1;Name=comp146276_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.5;matches=270;mismatches=4;indels=0;unknowns=0;Target=comp146276_c0_seq1 275 2 .;CDS_Target=comp146276_c0_seq1 120 4 .;locus=RLOC_00003549
ChrX	stalkie_big_nohaplotig	exon	61557037	61557310	98	-	.	Parent=comp146276_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61557192	61557308	.	-	0	Parent=comp146276_c0_seq1.mrna1
ChrX	gffcl	locus	61563768	61564177	.	-	.	ID=RLOC_00003550;geneIDs=comp148380_c0_seq1.path1;transcripts=comp148380_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61563768	61564177	.	-	.	ID=comp148380_c0_seq1.mrna1;geneID=comp148380_c0_seq1.path1;Name=comp148380_c0_seq1;Dir=indeterminatecoverage=93.7;identity=93.1;matches=402;mismatches=8;indels=22;unknowns=0;Target=comp148380_c0_seq1 432 1 .;CDS_Target=comp148380_c0_seq1 243 142 .;locus=RLOC_00003550
ChrX	stalkie_big_nohaplotig	exon	61563768	61564177	93	-	.	Parent=comp148380_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61563953	61564054	.	-	0	Parent=comp148380_c0_seq1.mrna1
ChrX	gffcl	locus	61564303	61564961	.	+	.	ID=RLOC_00003551;geneIDs=comp150837_c0_seq1.path2;transcripts=comp150837_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	61564303	61564961	.	+	.	ID=comp150837_c0_seq1.mrna2;geneID=comp150837_c0_seq1.path2;Name=comp150837_c0_seq1;Dir=indeterminatecoverage=84.5;identity=99.8;matches=658;mismatches=1;indels=0;unknowns=0;Target=comp150837_c0_seq1 728 70 .;CDS_Target=comp150837_c0_seq1 598 473 .;locus=RLOC_00003551
ChrX	stalkie_big_nohaplotig	exon	61564303	61564961	99	+	.	Parent=comp150837_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	61564706	61564831	.	+	0	Parent=comp150837_c0_seq1.mrna2
ChrX	gffcl	locus	61565298	61567334	.	+	.	ID=RLOC_00003552;geneIDs=comp151215_c0_seq1.path1;transcripts=comp151215_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61565298	61567334	.	+	.	ID=comp151215_c0_seq1.mrna1;geneID=comp151215_c0_seq1.path1;Name=comp151215_c0_seq1;Dir=sensecoverage=99.9;identity=100.0;matches=1316;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003552
ChrX	stalkie_big_nohaplotig	exon	61565298	61565800	100	+	.	Parent=comp151215_c0_seq1.mrna1;Target=comp151215_c0_seq1 1 503 +
ChrX	stalkie_big_nohaplotig	exon	61565976	61566025	100	+	.	Parent=comp151215_c0_seq1.mrna1;Target=comp151215_c0_seq1 504 553 +
ChrX	stalkie_big_nohaplotig	exon	61566084	61566454	100	+	.	Parent=comp151215_c0_seq1.mrna1;Target=comp151215_c0_seq1 554 924 +
ChrX	stalkie_big_nohaplotig	exon	61566539	61566616	100	+	.	Parent=comp151215_c0_seq1.mrna1;Target=comp151215_c0_seq1 925 1002 +
ChrX	stalkie_big_nohaplotig	exon	61566887	61566998	100	+	.	Parent=comp151215_c0_seq1.mrna1;Target=comp151215_c0_seq1 1003 1114 +
ChrX	stalkie_big_nohaplotig	exon	61567062	61567137	100	+	.	Parent=comp151215_c0_seq1.mrna1;Target=comp151215_c0_seq1 1115 1190 +
ChrX	stalkie_big_nohaplotig	exon	61567209	61567334	100	+	.	Parent=comp151215_c0_seq1.mrna1;Target=comp151215_c0_seq1 1191 1316 +
ChrX	stalkie_big_nohaplotig	CDS	61565467	61565800	.	+	0	Parent=comp151215_c0_seq1.mrna1;Target=comp151215_c0_seq1 170 503 +
ChrX	stalkie_big_nohaplotig	CDS	61565976	61565995	.	+	2	Parent=comp151215_c0_seq1.mrna1;Target=comp151215_c0_seq1 504 523 +
ChrX	gffcl	locus	61569081	61571128	.	-	.	ID=RLOC_00003553;geneIDs=comp102507_c0_seq1.path1;transcripts=comp102507_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61569081	61571128	.	-	.	ID=comp102507_c0_seq1.mrna1;geneID=comp102507_c0_seq1.path1;Name=comp102507_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=312;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003553
ChrX	stalkie_big_nohaplotig	exon	61569081	61569103	100	-	.	Parent=comp102507_c0_seq1.mrna1;Target=comp102507_c0_seq1 1 23 -
ChrX	stalkie_big_nohaplotig	exon	61569244	61569509	100	-	.	Parent=comp102507_c0_seq1.mrna1;Target=comp102507_c0_seq1 24 289 -
ChrX	stalkie_big_nohaplotig	exon	61571106	61571128	100	-	.	Parent=comp102507_c0_seq1.mrna1;Target=comp102507_c0_seq1 290 312 -
ChrX	stalkie_big_nohaplotig	CDS	61569412	61569509	.	-	2	Parent=comp102507_c0_seq1.mrna1;Target=comp102507_c0_seq1 192 289 .
ChrX	stalkie_big_nohaplotig	CDS	61571106	61571127	.	-	0	Parent=comp102507_c0_seq1.mrna1;Target=comp102507_c0_seq1 290 311 .
ChrX	gffcl	locus	61574377	61574678	.	+	.	ID=RLOC_00003554;geneIDs=comp141344_c0_seq1.path1;transcripts=comp141344_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61574377	61574678	.	+	.	ID=comp141344_c0_seq1.mrna1;geneID=comp141344_c0_seq1.path1;Name=comp141344_c0_seq1;Dir=indeterminatecoverage=100.0;identity=86.4;matches=298;mismatches=4;indels=43;unknowns=0;Target=comp141344_c0_seq1 345 1 .;CDS_Target=comp141344_c0_seq1 242 186 .;locus=RLOC_00003554
ChrX	stalkie_big_nohaplotig	exon	61574377	61574678	86	+	.	Parent=comp141344_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61574562	61574592	.	+	0	Parent=comp141344_c0_seq1.mrna1
ChrX	gffcl	locus	61595897	61600740	.	-	.	ID=RLOC_00003556;geneIDs=comp152188_c0_seq1.path1;transcripts=comp152188_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61595897	61600740	.	-	.	ID=comp152188_c0_seq1.mrna1;geneID=comp152188_c0_seq1.path1;Name=comp152188_c0_seq1;Dir=indeterminatecoverage=98.2;identity=100.0;matches=1161;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003556
ChrX	stalkie_big_nohaplotig	exon	61595897	61596688	100	-	.	Parent=comp152188_c0_seq1.mrna1;Target=comp152188_c0_seq1 1161 370 .
ChrX	stalkie_big_nohaplotig	exon	61596743	61597011	100	-	.	Parent=comp152188_c0_seq1.mrna1;Target=comp152188_c0_seq1 369 101 .
ChrX	stalkie_big_nohaplotig	exon	61600641	61600740	100	-	.	Parent=comp152188_c0_seq1.mrna1;Target=comp152188_c0_seq1 100 1 .
ChrX	stalkie_big_nohaplotig	CDS	61596065	61596688	.	-	0	Parent=comp152188_c0_seq1.mrna1;Target=comp152188_c0_seq1 993 370 .
ChrX	stalkie_big_nohaplotig	CDS	61596743	61596790	.	-	0	Parent=comp152188_c0_seq1.mrna1;Target=comp152188_c0_seq1 369 322 .
ChrX	gffcl	locus	61603286	61604191	.	-	.	ID=RLOC_00003557;geneIDs=comp148084_c0_seq1.path1;transcripts=comp148084_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61603286	61604191	.	-	.	ID=comp148084_c0_seq1.mrna1;geneID=comp148084_c0_seq1.path1;Name=comp148084_c0_seq1;Dir=antisensecoverage=96.6;identity=99.6;matches=830;mismatches=0;indels=3;unknowns=0;Target=comp148084_c0_seq1 746 838 .;locus=RLOC_00003557
ChrX	stalkie_big_nohaplotig	exon	61603286	61604004	99	-	.	Parent=comp148084_c0_seq1.mrna1;Target=comp148084_c0_seq1 6 726 -
ChrX	stalkie_big_nohaplotig	exon	61604081	61604191	99	-	.	Parent=comp148084_c0_seq1.mrna1;Target=comp148084_c0_seq1 727 838 -
ChrX	stalkie_big_nohaplotig	CDS	61604100	61604191	.	-	0	Parent=comp148084_c0_seq1.mrna1
ChrX	gffcl	locus	61610896	61612490	.	+	.	ID=RLOC_00003558;geneIDs=comp151196_c0_seq1.path1;transcripts=comp151196_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61610896	61612490	.	+	.	ID=comp151196_c0_seq1.mrna1;geneID=comp151196_c0_seq1.path1;Name=comp151196_c0_seq1;Dir=sensecoverage=99.7;identity=99.9;matches=1530;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003558
ChrX	stalkie_big_nohaplotig	exon	61610896	61611197	100	+	.	Parent=comp151196_c0_seq1.mrna1;Target=comp151196_c0_seq1 1 302 +
ChrX	stalkie_big_nohaplotig	exon	61611262	61612490	99	+	.	Parent=comp151196_c0_seq1.mrna1;Target=comp151196_c0_seq1 303 1531 +
ChrX	stalkie_big_nohaplotig	CDS	61611150	61611197	.	+	0	Parent=comp151196_c0_seq1.mrna1;Target=comp151196_c0_seq1 255 302 +
ChrX	stalkie_big_nohaplotig	CDS	61611262	61611915	.	+	0	Parent=comp151196_c0_seq1.mrna1;Target=comp151196_c0_seq1 303 956 +
ChrX	gffcl	locus	61620066	61621241	.	-	.	ID=RLOC_00003559;geneIDs=comp213060_c0_seq1.path1;transcripts=comp213060_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61620066	61621241	.	-	.	ID=comp213060_c0_seq1.mrna1;geneID=comp213060_c0_seq1.path1;Name=comp213060_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=938;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003559
ChrX	stalkie_big_nohaplotig	exon	61620066	61620755	100	-	.	Parent=comp213060_c0_seq1.mrna1;Target=comp213060_c0_seq1 249 938 +
ChrX	stalkie_big_nohaplotig	exon	61620810	61621006	100	-	.	Parent=comp213060_c0_seq1.mrna1;Target=comp213060_c0_seq1 52 248 +
ChrX	stalkie_big_nohaplotig	exon	61621191	61621241	100	-	.	Parent=comp213060_c0_seq1.mrna1;Target=comp213060_c0_seq1 1 51 +
ChrX	stalkie_big_nohaplotig	CDS	61620072	61620755	.	-	0	Parent=comp213060_c0_seq1.mrna1;Target=comp213060_c0_seq1 249 932 +
ChrX	stalkie_big_nohaplotig	CDS	61620810	61620860	.	-	0	Parent=comp213060_c0_seq1.mrna1;Target=comp213060_c0_seq1 198 248 +
ChrX	gffcl	locus	61628833	61629696	.	-	.	ID=RLOC_00003560;geneIDs=ORF2814.path1;transcripts=ORF2814.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61628833	61629696	.	-	.	ID=ORF2814.mrna1;geneID=ORF2814.path1;Name=ORF2814;Dir=sensecoverage=100.0;identity=100.0;matches=801;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003560
ChrX	stalkie_big_nohaplotig	exon	61628833	61629480	100	-	.	Parent=ORF2814.mrna1;Target=ORF2814 154 801 +
ChrX	stalkie_big_nohaplotig	exon	61629544	61629696	100	-	.	Parent=ORF2814.mrna1;Target=ORF2814 1 153 +
ChrX	stalkie_big_nohaplotig	CDS	61628833	61629480	.	-	0	Parent=ORF2814.mrna1;Target=ORF2814 154 801 +
ChrX	stalkie_big_nohaplotig	CDS	61629544	61629696	.	-	0	Parent=ORF2814.mrna1;Target=ORF2814 1 153 +
ChrX	gffcl	locus	61635213	61636017	.	+	.	ID=RLOC_00003561;geneIDs=comp156419_c0_seq1.path1;transcripts=comp156419_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61635213	61636017	.	+	.	ID=comp156419_c0_seq1.mrna1;geneID=comp156419_c0_seq1.path1;Name=comp156419_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.8;matches=804;mismatches=1;indels=1;unknowns=0;Target=comp156419_c0_seq1 806 1 .;CDS_Target=comp156419_c0_seq1 112 2 .;locus=RLOC_00003561
ChrX	stalkie_big_nohaplotig	exon	61635213	61636017	99	+	.	Parent=comp156419_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61635214	61635324	.	+	0	Parent=comp156419_c0_seq1.mrna1
ChrX	gffcl	locus	61636455	61645550	.	.	.	ID=RLOC_00003562;geneIDs=ORF2441.path1,comp147615_c0_seq1.path1,comp156618_c0_seq1.path1,comp159431_c1_seq1.path1;transcripts=ORF2441.mrna1,comp159431_c1_seq1.mrna1,comp147615_c0_seq1.mrna1,comp156618_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61636455	61645550	.	+	.	ID=ORF2441.mrna1;geneID=ORF2441.path1;Name=ORF2441;Dir=sensecoverage=100.0;identity=100.0;matches=858;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003562
ChrX	stalkie_big_nohaplotig	exon	61636455	61636523	100	+	.	Parent=ORF2441.mrna1;Target=ORF2441 1 69 +
ChrX	stalkie_big_nohaplotig	exon	61639429	61639518	100	+	.	Parent=ORF2441.mrna1;Target=ORF2441 70 159 +
ChrX	stalkie_big_nohaplotig	exon	61640966	61641028	100	+	.	Parent=ORF2441.mrna1;Target=ORF2441 160 222 +
ChrX	stalkie_big_nohaplotig	exon	61641093	61641191	100	+	.	Parent=ORF2441.mrna1;Target=ORF2441 223 321 +
ChrX	stalkie_big_nohaplotig	exon	61641257	61641337	100	+	.	Parent=ORF2441.mrna1;Target=ORF2441 322 402 +
ChrX	stalkie_big_nohaplotig	exon	61641430	61641510	100	+	.	Parent=ORF2441.mrna1;Target=ORF2441 403 483 +
ChrX	stalkie_big_nohaplotig	exon	61643312	61643356	100	+	.	Parent=ORF2441.mrna1;Target=ORF2441 484 528 +
ChrX	stalkie_big_nohaplotig	exon	61643426	61643518	100	+	.	Parent=ORF2441.mrna1;Target=ORF2441 529 621 +
ChrX	stalkie_big_nohaplotig	exon	61643984	61644076	100	+	.	Parent=ORF2441.mrna1;Target=ORF2441 622 714 +
ChrX	stalkie_big_nohaplotig	exon	61645346	61645411	100	+	.	Parent=ORF2441.mrna1;Target=ORF2441 715 780 +
ChrX	stalkie_big_nohaplotig	exon	61645473	61645550	100	+	.	Parent=ORF2441.mrna1;Target=ORF2441 781 858 +
ChrX	stalkie_big_nohaplotig	CDS	61636455	61636523	.	+	0	Parent=ORF2441.mrna1;Target=ORF2441 1 69 +
ChrX	stalkie_big_nohaplotig	CDS	61639429	61639518	.	+	0	Parent=ORF2441.mrna1;Target=ORF2441 70 159 +
ChrX	stalkie_big_nohaplotig	CDS	61640966	61641028	.	+	0	Parent=ORF2441.mrna1;Target=ORF2441 160 222 +
ChrX	stalkie_big_nohaplotig	CDS	61641093	61641191	.	+	0	Parent=ORF2441.mrna1;Target=ORF2441 223 321 +
ChrX	stalkie_big_nohaplotig	CDS	61641257	61641337	.	+	0	Parent=ORF2441.mrna1;Target=ORF2441 322 402 +
ChrX	stalkie_big_nohaplotig	CDS	61641430	61641510	.	+	0	Parent=ORF2441.mrna1;Target=ORF2441 403 483 +
ChrX	stalkie_big_nohaplotig	CDS	61643312	61643356	.	+	0	Parent=ORF2441.mrna1;Target=ORF2441 484 528 +
ChrX	stalkie_big_nohaplotig	CDS	61643426	61643518	.	+	0	Parent=ORF2441.mrna1;Target=ORF2441 529 621 +
ChrX	stalkie_big_nohaplotig	CDS	61643984	61644076	.	+	0	Parent=ORF2441.mrna1;Target=ORF2441 622 714 +
ChrX	stalkie_big_nohaplotig	CDS	61645346	61645411	.	+	0	Parent=ORF2441.mrna1;Target=ORF2441 715 780 +
ChrX	stalkie_big_nohaplotig	CDS	61645473	61645550	.	+	0	Parent=ORF2441.mrna1;Target=ORF2441 781 858 +
ChrX	stalkie_big_nohaplotig	mRNA	61641619	61643332	.	-	.	ID=comp159431_c1_seq1.mrna1;geneID=comp159431_c1_seq1.path1;Name=comp159431_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1705;mismatches=9;indels=4;unknowns=0;Target=comp159431_c1_seq1 1718 1 .;CDS_Target=comp159431_c1_seq1 1292 1071 .;locus=RLOC_00003562
ChrX	stalkie_big_nohaplotig	exon	61641619	61643332	99	-	.	Parent=comp159431_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61642045	61642266	.	-	0	Parent=comp159431_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61643497	61644005	.	+	.	ID=comp147615_c0_seq1.mrna1;geneID=comp147615_c0_seq1.path1;Name=comp147615_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=509;mismatches=0;indels=0;unknowns=0;Target=comp147615_c0_seq1 509 1 .;CDS_Target=comp147615_c0_seq1 347 90 .;locus=RLOC_00003562
ChrX	stalkie_big_nohaplotig	exon	61643497	61644005	100	+	.	Parent=comp147615_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61643586	61643843	.	+	0	Parent=comp147615_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61644053	61645253	.	-	.	ID=comp156618_c0_seq1.mrna1;geneID=comp156618_c0_seq1.path1;Name=comp156618_c0_seq1;Dir=indeterminatecoverage=98.2;identity=99.5;matches=1195;mismatches=6;indels=0;unknowns=0;Target=comp156618_c0_seq1 1223 23 .;CDS_Target=comp156618_c0_seq1 391 287 .;locus=RLOC_00003562
ChrX	stalkie_big_nohaplotig	exon	61644053	61645253	99	-	.	Parent=comp156618_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61644885	61644989	.	-	0	Parent=comp156618_c0_seq1.mrna1
ChrX	gffcl	locus	61673847	61674354	.	-	.	ID=RLOC_00003563;geneIDs=comp144714_c1_seq1.path1;transcripts=comp144714_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61673847	61674354	.	-	.	ID=comp144714_c1_seq1.mrna1;geneID=comp144714_c1_seq1.path1;Name=comp144714_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=506;mismatches=2;indels=0;unknowns=0;Target=comp144714_c1_seq1 508 1 .;CDS_Target=comp144714_c1_seq1 77 3 .;locus=RLOC_00003563
ChrX	stalkie_big_nohaplotig	exon	61673847	61674354	99	-	.	Parent=comp144714_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61674278	61674352	.	-	0	Parent=comp144714_c1_seq1.mrna1
ChrX	gffcl	locus	61689258	61692889	.	+	.	ID=RLOC_00003564;geneIDs=comp160668_c0_seq1.path1;transcripts=comp160668_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61689258	61692889	.	+	.	ID=comp160668_c0_seq1.mrna1;geneID=comp160668_c0_seq1.path1;Name=comp160668_c0_seq1;Dir=sensecoverage=99.7;identity=99.4;matches=1323;mismatches=7;indels=1;unknowns=0;locus=RLOC_00003564
ChrX	stalkie_big_nohaplotig	exon	61689258	61689561	98	+	.	Parent=comp160668_c0_seq1.mrna1;Target=comp160668_c0_seq1 5 309 +
ChrX	stalkie_big_nohaplotig	exon	61689624	61689926	99	+	.	Parent=comp160668_c0_seq1.mrna1;Target=comp160668_c0_seq1 310 612 +
ChrX	stalkie_big_nohaplotig	exon	61692167	61692889	99	+	.	Parent=comp160668_c0_seq1.mrna1;Target=comp160668_c0_seq1 613 1335 +
ChrX	stalkie_big_nohaplotig	CDS	61689448	61689561	.	+	0	Parent=comp160668_c0_seq1.mrna1;Target=comp160668_c0_seq1 196 309 +
ChrX	stalkie_big_nohaplotig	CDS	61689624	61689926	.	+	0	Parent=comp160668_c0_seq1.mrna1;Target=comp160668_c0_seq1 310 612 +
ChrX	stalkie_big_nohaplotig	CDS	61692167	61692508	.	+	0	Parent=comp160668_c0_seq1.mrna1;Target=comp160668_c0_seq1 613 954 +
ChrX	gffcl	locus	61759913	61760915	.	-	.	ID=RLOC_00003565;geneIDs=comp150542_c0_seq1.path1;transcripts=comp150542_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61759913	61760915	.	-	.	ID=comp150542_c0_seq1.mrna1;geneID=comp150542_c0_seq1.path1;Name=comp150542_c0_seq1;Dir=sensecoverage=96.1;identity=98.2;matches=926;mismatches=8;indels=9;unknowns=0;Target=comp150542_c0_seq1 63 74 +;locus=RLOC_00003565
ChrX	stalkie_big_nohaplotig	exon	61759913	61760406	99	-	.	Parent=comp150542_c0_seq1.mrna1;Target=comp150542_c0_seq1 470 963 +
ChrX	stalkie_big_nohaplotig	exon	61760476	61760915	96	-	.	Parent=comp150542_c0_seq1.mrna1;Target=comp150542_c0_seq1 21 469 +
ChrX	stalkie_big_nohaplotig	CDS	61760870	61760873	.	-	0	Parent=comp150542_c0_seq1.mrna1
ChrX	gffcl	locus	61763331	61764435	.	.	.	ID=RLOC_00003566;geneIDs=FBgn0032833.1.path1,comp146022_c0_seq1.path1;transcripts=FBgn0032833.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61763331	61763946	.	-	.	ID=FBgn0032833.1.mrna1;geneID=FBgn0032833.1.path1;Name=FBgn0032833.1;Dir=sensecoverage=100.0;identity=100.0;matches=549;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003566
ChrX	stalkie_big_nohaplotig	exon	61763331	61763461	100	-	.	Parent=FBgn0032833.1.mrna1;Target=FBgn0032833.1 419 549 +
ChrX	stalkie_big_nohaplotig	exon	61763529	61763946	100	-	.	Parent=FBgn0032833.1.mrna1;Target=FBgn0032833.1 1 418 +
ChrX	stalkie_big_nohaplotig	CDS	61763331	61763461	.	-	2	Parent=FBgn0032833.1.mrna1;Target=FBgn0032833.1 419 549 +
ChrX	stalkie_big_nohaplotig	CDS	61763529	61763946	.	-	0	Parent=FBgn0032833.1.mrna1;Target=FBgn0032833.1 1 418 +
ChrX	gffcl	locus	61769019	61771471	.	+	.	ID=RLOC_00003567;geneIDs=comp118009_c0_seq1.path1;transcripts=comp118009_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61769019	61771471	.	+	.	ID=comp118009_c0_seq1.mrna1;geneID=comp118009_c0_seq1.path1;Name=comp118009_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=244;mismatches=0;indels=0;unknowns=0;Target=comp118009_c0_seq1 77 244 +;locus=RLOC_00003567
ChrX	stalkie_big_nohaplotig	exon	61769019	61769077	100	+	.	Parent=comp118009_c0_seq1.mrna1;Target=comp118009_c0_seq1 1 59 +
ChrX	stalkie_big_nohaplotig	exon	61771287	61771471	100	+	.	Parent=comp118009_c0_seq1.mrna1;Target=comp118009_c0_seq1 60 244 +
ChrX	stalkie_big_nohaplotig	CDS	61771304	61771471	.	+	0	Parent=comp118009_c0_seq1.mrna1
ChrX	gffcl	locus	61773948	63581929	.	.	.	ID=RLOC_00003568;geneIDs=comp115266_c0_seq1.path1,comp151901_c1_seq1.path1;transcripts=comp115266_c0_seq1.mrna1,comp151901_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61773948	63581929	.	+	.	ID=comp115266_c0_seq1.mrna1;geneID=comp115266_c0_seq1.path1;Name=comp115266_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=334;mismatches=0;indels=9;unknowns=0;Target=comp115266_c0_seq1 124 2 .;locus=RLOC_00003568
ChrX	stalkie_big_nohaplotig	exon	61773948	61774181	100	+	.	Parent=comp115266_c0_seq1.mrna1;Target=comp115266_c0_seq1 234 1 .
ChrX	stalkie_big_nohaplotig	exon	63540787	63540793	100	+	.	Parent=comp115266_c0_seq1.mrna1;Target=comp115266_c0_seq1 241 235 .
ChrX	stalkie_big_nohaplotig	exon	63542358	63542361	100	+	.	Parent=comp115266_c0_seq1.mrna1;Target=comp115266_c0_seq1 245 242 .
ChrX	stalkie_big_nohaplotig	exon	63548515	63548532	50	+	.	Parent=comp115266_c0_seq1.mrna1;Target=comp115266_c0_seq1 254 246 .
ChrX	stalkie_big_nohaplotig	exon	63549849	63549858	100	+	.	Parent=comp115266_c0_seq1.mrna1;Target=comp115266_c0_seq1 264 255 .
ChrX	stalkie_big_nohaplotig	exon	63556332	63556337	100	+	.	Parent=comp115266_c0_seq1.mrna1;Target=comp115266_c0_seq1 270 265 .
ChrX	stalkie_big_nohaplotig	exon	63556586	63556590	100	+	.	Parent=comp115266_c0_seq1.mrna1;Target=comp115266_c0_seq1 275 271 .
ChrX	stalkie_big_nohaplotig	exon	63564523	63564526	100	+	.	Parent=comp115266_c0_seq1.mrna1;Target=comp115266_c0_seq1 279 276 .
ChrX	stalkie_big_nohaplotig	exon	63569396	63569398	100	+	.	Parent=comp115266_c0_seq1.mrna1;Target=comp115266_c0_seq1 282 280 .
ChrX	stalkie_big_nohaplotig	exon	63575634	63575639	100	+	.	Parent=comp115266_c0_seq1.mrna1;Target=comp115266_c0_seq1 288 283 .
ChrX	stalkie_big_nohaplotig	exon	63578077	63578087	100	+	.	Parent=comp115266_c0_seq1.mrna1;Target=comp115266_c0_seq1 299 289 .
ChrX	stalkie_big_nohaplotig	exon	63578154	63578160	100	+	.	Parent=comp115266_c0_seq1.mrna1;Target=comp115266_c0_seq1 306 300 .
ChrX	stalkie_big_nohaplotig	exon	63578173	63578174	100	+	.	Parent=comp115266_c0_seq1.mrna1;Target=comp115266_c0_seq1 365 364 .
ChrX	stalkie_big_nohaplotig	exon	63580061	63580067	100	+	.	Parent=comp115266_c0_seq1.mrna1;Target=comp115266_c0_seq1 372 366 .
ChrX	stalkie_big_nohaplotig	exon	63581911	63581929	100	+	.	Parent=comp115266_c0_seq1.mrna1;Target=comp115266_c0_seq1 391 373 .
ChrX	stalkie_big_nohaplotig	CDS	61773949	61774071	.	+	0	Parent=comp115266_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63580007	63580531	.	-	.	ID=comp151901_c1_seq1.mrna1;geneID=comp151901_c1_seq1.path1;Name=comp151901_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=525;mismatches=0;indels=1;unknowns=0;Target=comp151901_c1_seq1 526 1 .;CDS_Target=comp151901_c1_seq1 210 88 .;locus=RLOC_00003568
ChrX	stalkie_big_nohaplotig	exon	63580007	63580531	99	-	.	Parent=comp151901_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	63580322	63580444	.	-	0	Parent=comp151901_c1_seq1.mrna1
ChrX	gffcl	locus	61774965	61776167	.	-	.	ID=RLOC_00003569;geneIDs=comp157608_c0_seq1.path1;transcripts=comp157608_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61774965	61776167	.	-	.	ID=comp157608_c0_seq1.mrna1;geneID=comp157608_c0_seq1.path1;Name=comp157608_c0_seq1;Dir=indeterminatecoverage=90.0;identity=100.0;matches=1203;mismatches=0;indels=0;unknowns=0;Target=comp157608_c0_seq1 1249 47 .;CDS_Target=comp157608_c0_seq1 298 47 .;locus=RLOC_00003569
ChrX	stalkie_big_nohaplotig	exon	61774965	61776167	100	-	.	Parent=comp157608_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	61775916	61776167	.	-	0	Parent=comp157608_c0_seq1.mrna1
ChrX	gffcl	locus	61977431	62145142	.	.	.	ID=RLOC_00003571;geneIDs=FBgn0014031.1.path1,comp74642_c0_seq1.path1,comp163990_c0_seq1.path1;transcripts=comp163990_c0_seq1.mrna1,FBgn0014031.1.mrna1,comp74642_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	61977431	62145142	.	+	.	ID=comp163990_c0_seq1.mrna1;geneID=comp163990_c0_seq1.path1;Name=comp163990_c0_seq1;Dir=indeterminatecoverage=24.7;identity=97.5;matches=583;mismatches=13;indels=2;unknowns=0;Target=comp163990_c0_seq1 1521 1462 .;locus=RLOC_00003571
ChrX	stalkie_big_nohaplotig	exon	61977431	61977853	96	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 1880 1460 .
ChrX	stalkie_big_nohaplotig	exon	61984084	61984088	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 1885 1881 .
ChrX	stalkie_big_nohaplotig	exon	62000922	62000931	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 1895 1886 .
ChrX	stalkie_big_nohaplotig	exon	62005198	62005206	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 1904 1896 .
ChrX	stalkie_big_nohaplotig	exon	62037095	62037104	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 1928 1919 .
ChrX	stalkie_big_nohaplotig	exon	62038591	62038599	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 1952 1944 .
ChrX	stalkie_big_nohaplotig	exon	62041943	62041949	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 1964 1958 .
ChrX	stalkie_big_nohaplotig	exon	62045424	62045435	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 1976 1965 .
ChrX	stalkie_big_nohaplotig	exon	62051550	62051552	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 1986 1984 .
ChrX	stalkie_big_nohaplotig	exon	62052270	62052273	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 1990 1987 .
ChrX	stalkie_big_nohaplotig	exon	62058805	62058816	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 2002 1991 .
ChrX	stalkie_big_nohaplotig	exon	62065100	62065101	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 2018 2017 .
ChrX	stalkie_big_nohaplotig	exon	62071215	62071223	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 2027 2019 .
ChrX	stalkie_big_nohaplotig	exon	62071240	62071247	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 2056 2049 .
ChrX	stalkie_big_nohaplotig	exon	62071272	62071275	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 2085 2082 .
ChrX	stalkie_big_nohaplotig	exon	62078135	62078144	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 2095 2086 .
ChrX	stalkie_big_nohaplotig	exon	62078817	62078821	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 2114 2110 .
ChrX	stalkie_big_nohaplotig	exon	62079206	62079207	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 2116 2115 .
ChrX	stalkie_big_nohaplotig	exon	62083322	62083328	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 2123 2117 .
ChrX	stalkie_big_nohaplotig	exon	62094063	62094066	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 2127 2124 .
ChrX	stalkie_big_nohaplotig	exon	62114154	62114159	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 2133 2128 .
ChrX	stalkie_big_nohaplotig	exon	62124801	62124804	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 2137 2134 .
ChrX	stalkie_big_nohaplotig	exon	62140506	62140509	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 2141 2138 .
ChrX	stalkie_big_nohaplotig	exon	62142517	62142527	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 2152 2142 .
ChrX	stalkie_big_nohaplotig	exon	62142598	62142604	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 2159 2153 .
ChrX	stalkie_big_nohaplotig	exon	62143487	62143494	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 2167 2160 .
ChrX	stalkie_big_nohaplotig	exon	62145140	62145142	100	+	.	Parent=comp163990_c0_seq1.mrna1;Target=comp163990_c0_seq1 2170 2168 .
ChrX	stalkie_big_nohaplotig	CDS	61977433	61977492	.	+	0	Parent=comp163990_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62119367	62125871	.	+	.	ID=FBgn0014031.1.mrna1;geneID=FBgn0014031.1.path1;Name=FBgn0014031.1;Dir=sensecoverage=100.0;identity=100.0;matches=1245;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003571
ChrX	stalkie_big_nohaplotig	exon	62119367	62119582	100	+	.	Parent=FBgn0014031.1.mrna1;Target=FBgn0014031.1 1 216 +
ChrX	stalkie_big_nohaplotig	exon	62124783	62125645	100	+	.	Parent=FBgn0014031.1.mrna1;Target=FBgn0014031.1 217 1079 +
ChrX	stalkie_big_nohaplotig	exon	62125706	62125871	100	+	.	Parent=FBgn0014031.1.mrna1;Target=FBgn0014031.1 1080 1245 +
ChrX	stalkie_big_nohaplotig	CDS	62119367	62119582	.	+	0	Parent=FBgn0014031.1.mrna1;Target=FBgn0014031.1 1 216 +
ChrX	stalkie_big_nohaplotig	CDS	62124783	62125645	.	+	0	Parent=FBgn0014031.1.mrna1;Target=FBgn0014031.1 217 1079 +
ChrX	stalkie_big_nohaplotig	CDS	62125706	62125871	.	+	1	Parent=FBgn0014031.1.mrna1;Target=FBgn0014031.1 1080 1245 +
ChrX	stalkie_big_nohaplotig	mRNA	62124422	62124804	.	-	.	ID=comp74642_c0_seq1.mrna1;geneID=comp74642_c0_seq1.path1;Name=comp74642_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=383;mismatches=0;indels=0;unknowns=0;Target=comp74642_c0_seq1 383 1 .;CDS_Target=comp74642_c0_seq1 160 2 .;locus=RLOC_00003571
ChrX	stalkie_big_nohaplotig	exon	62124422	62124804	100	-	.	Parent=comp74642_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62124645	62124803	.	-	0	Parent=comp74642_c0_seq1.mrna1
ChrX	gffcl	locus	62027077	62028617	.	+	.	ID=RLOC_00003572;geneIDs=comp134278_c2_seq1.path1;transcripts=comp134278_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62027077	62028617	.	+	.	ID=comp134278_c2_seq1.mrna1;geneID=comp134278_c2_seq1.path1;Name=comp134278_c2_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=576;mismatches=2;indels=0;unknowns=0;Target=comp134278_c2_seq1 3 203 +;locus=RLOC_00003572
ChrX	stalkie_big_nohaplotig	exon	62027077	62027348	99	+	.	Parent=comp134278_c2_seq1.mrna1;Target=comp134278_c2_seq1 1 272 +
ChrX	stalkie_big_nohaplotig	exon	62028312	62028617	99	+	.	Parent=comp134278_c2_seq1.mrna1;Target=comp134278_c2_seq1 273 578 +
ChrX	stalkie_big_nohaplotig	CDS	62027079	62027279	.	+	0	Parent=comp134278_c2_seq1.mrna1
ChrX	gffcl	locus	62092764	62093904	.	+	.	ID=RLOC_00003573;geneIDs=comp111136_c0_seq1.path1,comp253567_c0_seq1.path1;transcripts=comp111136_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62093072	62093904	.	+	.	ID=comp111136_c0_seq1.mrna1;geneID=comp111136_c0_seq1.path1;Name=comp111136_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=549;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003573
ChrX	stalkie_big_nohaplotig	exon	62093072	62093118	100	+	.	Parent=comp111136_c0_seq1.mrna1;Target=comp111136_c0_seq1 1 47 +
ChrX	stalkie_big_nohaplotig	exon	62093403	62093904	100	+	.	Parent=comp111136_c0_seq1.mrna1;Target=comp111136_c0_seq1 48 549 +
ChrX	stalkie_big_nohaplotig	CDS	62093073	62093118	.	+	0	Parent=comp111136_c0_seq1.mrna1;Target=comp111136_c0_seq1 2 47 +
ChrX	stalkie_big_nohaplotig	CDS	62093403	62093557	.	+	2	Parent=comp111136_c0_seq1.mrna1;Target=comp111136_c0_seq1 48 202 +
ChrX	gffcl	locus	62126131	62126607	.	+	.	ID=RLOC_00003574;geneIDs=comp146912_c0_seq1.path1;transcripts=comp146912_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62126131	62126607	.	+	.	ID=comp146912_c0_seq1.mrna1;geneID=comp146912_c0_seq1.path1;Name=comp146912_c0_seq1;Dir=indeterminatecoverage=99.5;identity=100.0;matches=400;mismatches=0;indels=0;unknowns=0;Target=comp146912_c0_seq1 54 4 .;locus=RLOC_00003574
ChrX	stalkie_big_nohaplotig	exon	62126131	62126346	100	+	.	Parent=comp146912_c0_seq1.mrna1;Target=comp146912_c0_seq1 218 3 .
ChrX	stalkie_big_nohaplotig	exon	62126424	62126607	100	+	.	Parent=comp146912_c0_seq1.mrna1;Target=comp146912_c0_seq1 402 219 .
ChrX	stalkie_big_nohaplotig	CDS	62126132	62126182	.	+	0	Parent=comp146912_c0_seq1.mrna1
ChrX	gffcl	locus	62127191	62128245	.	+	.	ID=RLOC_00003575;geneIDs=comp153159_c0_seq1.path1;transcripts=comp153159_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62127191	62128245	.	+	.	ID=comp153159_c0_seq1.mrna1;geneID=comp153159_c0_seq1.path1;Name=comp153159_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1055;mismatches=0;indels=0;unknowns=0;Target=comp153159_c0_seq1 1055 1 .;CDS_Target=comp153159_c0_seq1 1055 969 .;locus=RLOC_00003575
ChrX	stalkie_big_nohaplotig	exon	62127191	62128245	100	+	.	Parent=comp153159_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62128159	62128245	.	+	0	Parent=comp153159_c0_seq1.mrna1
ChrX	gffcl	locus	62189310	62191091	.	+	.	ID=RLOC_00003576;geneIDs=ORF458.path1;transcripts=ORF458.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62189310	62191091	.	+	.	ID=ORF458.mrna1;geneID=ORF458.path1;Name=ORF458;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1780;mismatches=2;indels=0;unknowns=0;Target=ORF458 1782 1 .;locus=RLOC_00003576
ChrX	stalkie_big_nohaplotig	exon	62189310	62191091	99	+	.	Parent=ORF458.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62189310	62191091	.	+	0	Parent=ORF458.mrna1
ChrX	gffcl	locus	62221580	62223722	.	+	.	ID=RLOC_00003577;geneIDs=ORF323.path1;transcripts=ORF323.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62221580	62223722	.	+	.	ID=ORF323.mrna1;geneID=ORF323.path1;Name=ORF323;Dir=sensecoverage=100.0;identity=99.3;matches=2005;mismatches=11;indels=3;unknowns=0;locus=RLOC_00003577
ChrX	stalkie_big_nohaplotig	exon	62221580	62221835	94	+	.	Parent=ORF323.mrna1;Target=ORF323 1 259 +
ChrX	stalkie_big_nohaplotig	exon	62221911	62223524	100	+	.	Parent=ORF323.mrna1;Target=ORF323 260 1873 +
ChrX	stalkie_big_nohaplotig	exon	62223577	62223722	100	+	.	Parent=ORF323.mrna1;Target=ORF323 1874 2019 +
ChrX	stalkie_big_nohaplotig	CDS	62221580	62221835	.	+	0	Parent=ORF323.mrna1;Target=ORF323 1 259 +
ChrX	stalkie_big_nohaplotig	CDS	62221911	62223524	.	+	2	Parent=ORF323.mrna1;Target=ORF323 260 1873 +
ChrX	stalkie_big_nohaplotig	CDS	62223577	62223722	.	+	2	Parent=ORF323.mrna1;Target=ORF323 1874 2019 +
ChrX	gffcl	locus	62266429	62267276	.	-	.	ID=RLOC_00003578;geneIDs=comp148365_c0_seq1.path1;transcripts=comp148365_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62266429	62267276	.	-	.	ID=comp148365_c0_seq1.mrna1;geneID=comp148365_c0_seq1.path1;Name=comp148365_c0_seq1;Dir=sensecoverage=100.0;identity=98.9;matches=786;mismatches=7;indels=2;unknowns=0;locus=RLOC_00003578
ChrX	stalkie_big_nohaplotig	exon	62266429	62267046	98	-	.	Parent=comp148365_c0_seq1.mrna1;Target=comp148365_c0_seq1 178 793 +
ChrX	stalkie_big_nohaplotig	exon	62267100	62267276	98	-	.	Parent=comp148365_c0_seq1.mrna1;Target=comp148365_c0_seq1 1 177 +
ChrX	stalkie_big_nohaplotig	CDS	62266561	62267046	.	-	0	Parent=comp148365_c0_seq1.mrna1;Target=comp148365_c0_seq1 178 663 +
ChrX	stalkie_big_nohaplotig	CDS	62267100	62267129	.	-	0	Parent=comp148365_c0_seq1.mrna1;Target=comp148365_c0_seq1 148 177 +
ChrX	gffcl	locus	62292209	62616014	.	+	.	ID=RLOC_00003579;geneIDs=FBgn0262123.1.path1,comp155285_c0_seq1.path1;transcripts=comp155285_c0_seq1.mrna1,FBgn0262123.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62292209	62616014	.	+	.	ID=comp155285_c0_seq1.mrna1;geneID=comp155285_c0_seq1.path1;Name=comp155285_c0_seq1;Dir=indeterminatecoverage=98.0;identity=89.1;matches=846;mismatches=52;indels=51;unknowns=0;Target=comp155285_c0_seq1 1065 826 .;locus=RLOC_00003579
ChrX	stalkie_big_nohaplotig	exon	62292209	62292222	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 36 23 .
ChrX	stalkie_big_nohaplotig	exon	62296617	62296621	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 41 37 .
ChrX	stalkie_big_nohaplotig	exon	62298628	62298631	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 45 42 .
ChrX	stalkie_big_nohaplotig	exon	62300697	62300702	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 51 46 .
ChrX	stalkie_big_nohaplotig	exon	62306754	62306774	52	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 62 52 .
ChrX	stalkie_big_nohaplotig	exon	62333533	62333536	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 66 63 .
ChrX	stalkie_big_nohaplotig	exon	62340579	62340586	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 74 67 .
ChrX	stalkie_big_nohaplotig	exon	62362787	62362788	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 76 75 .
ChrX	stalkie_big_nohaplotig	exon	62378542	62378545	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 80 77 .
ChrX	stalkie_big_nohaplotig	exon	62386083	62386094	91	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 92 81 .
ChrX	stalkie_big_nohaplotig	exon	62394956	62394966	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 103 93 .
ChrX	stalkie_big_nohaplotig	exon	62398968	62398995	42	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 182 162 .
ChrX	stalkie_big_nohaplotig	exon	62405395	62405401	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 189 183 .
ChrX	stalkie_big_nohaplotig	exon	62413000	62413004	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 194 190 .
ChrX	stalkie_big_nohaplotig	exon	62420836	62420839	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 198 195 .
ChrX	stalkie_big_nohaplotig	exon	62425793	62425804	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 210 199 .
ChrX	stalkie_big_nohaplotig	exon	62430325	62430329	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 215 211 .
ChrX	stalkie_big_nohaplotig	exon	62442299	62442308	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 225 216 .
ChrX	stalkie_big_nohaplotig	exon	62445548	62445554	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 295 289 .
ChrX	stalkie_big_nohaplotig	exon	62452253	62452263	90	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 306 296 .
ChrX	stalkie_big_nohaplotig	exon	62459161	62459212	44	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 355 307 .
ChrX	stalkie_big_nohaplotig	exon	62466352	62466358	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 362 356 .
ChrX	stalkie_big_nohaplotig	exon	62471514	62471518	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 367 363 .
ChrX	stalkie_big_nohaplotig	exon	62477072	62477074	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 370 368 .
ChrX	stalkie_big_nohaplotig	exon	62478024	62478054	56	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 407 371 .
ChrX	stalkie_big_nohaplotig	exon	62542205	62542206	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 410 409 .
ChrX	stalkie_big_nohaplotig	exon	62549370	62549371	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 412 411 .
ChrX	stalkie_big_nohaplotig	exon	62556731	62556735	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 417 413 .
ChrX	stalkie_big_nohaplotig	exon	62563301	62563303	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 420 418 .
ChrX	stalkie_big_nohaplotig	exon	62569344	62569346	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 423 421 .
ChrX	stalkie_big_nohaplotig	exon	62572660	62572668	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 432 424 .
ChrX	stalkie_big_nohaplotig	exon	62576795	62576801	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 441 435 .
ChrX	stalkie_big_nohaplotig	exon	62580560	62580563	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 445 442 .
ChrX	stalkie_big_nohaplotig	exon	62581653	62581661	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 454 446 .
ChrX	stalkie_big_nohaplotig	exon	62583273	62583277	100	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 462 458 .
ChrX	stalkie_big_nohaplotig	exon	62615424	62616014	95	+	.	Parent=comp155285_c0_seq1.mrna1;Target=comp155285_c0_seq1 1074 463 .
ChrX	stalkie_big_nohaplotig	CDS	62615766	62616005	.	+	0	Parent=comp155285_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62473278	62483826	.	+	.	ID=FBgn0262123.1.mrna1;geneID=FBgn0262123.1.path1;Name=FBgn0262123.1;Dir=sensecoverage=100.0;identity=100.0;matches=3326;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003579
ChrX	stalkie_big_nohaplotig	exon	62473278	62474743	99	+	.	Parent=FBgn0262123.1.mrna1;Target=FBgn0262123.1 1 1466 +
ChrX	stalkie_big_nohaplotig	exon	62476721	62476863	100	+	.	Parent=FBgn0262123.1.mrna1;Target=FBgn0262123.1 1467 1609 +
ChrX	stalkie_big_nohaplotig	exon	62476924	62477480	100	+	.	Parent=FBgn0262123.1.mrna1;Target=FBgn0262123.1 1610 2166 +
ChrX	stalkie_big_nohaplotig	exon	62478364	62478508	100	+	.	Parent=FBgn0262123.1.mrna1;Target=FBgn0262123.1 2167 2311 +
ChrX	stalkie_big_nohaplotig	exon	62478576	62478784	100	+	.	Parent=FBgn0262123.1.mrna1;Target=FBgn0262123.1 2312 2520 +
ChrX	stalkie_big_nohaplotig	exon	62483020	62483826	100	+	.	Parent=FBgn0262123.1.mrna1;Target=FBgn0262123.1 2521 3327 +
ChrX	stalkie_big_nohaplotig	CDS	62473278	62474743	.	+	0	Parent=FBgn0262123.1.mrna1;Target=FBgn0262123.1 1 1466 +
ChrX	stalkie_big_nohaplotig	CDS	62476721	62476863	.	+	1	Parent=FBgn0262123.1.mrna1;Target=FBgn0262123.1 1467 1609 +
ChrX	stalkie_big_nohaplotig	CDS	62476924	62477480	.	+	2	Parent=FBgn0262123.1.mrna1;Target=FBgn0262123.1 1610 2166 +
ChrX	stalkie_big_nohaplotig	CDS	62478364	62478508	.	+	0	Parent=FBgn0262123.1.mrna1;Target=FBgn0262123.1 2167 2311 +
ChrX	stalkie_big_nohaplotig	CDS	62478576	62478784	.	+	2	Parent=FBgn0262123.1.mrna1;Target=FBgn0262123.1 2312 2520 +
ChrX	stalkie_big_nohaplotig	CDS	62483020	62483826	.	+	0	Parent=FBgn0262123.1.mrna1;Target=FBgn0262123.1 2521 3327 +
ChrX	gffcl	locus	62379187	62380014	.	+	.	ID=RLOC_00003580;geneIDs=comp78013_c0_seq1.path1;transcripts=comp78013_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62379187	62380014	.	+	.	ID=comp78013_c0_seq1.mrna1;geneID=comp78013_c0_seq1.path1;Name=comp78013_c0_seq1;Dir=antisensecoverage=99.7;identity=100.0;matches=588;mismatches=0;indels=0;unknowns=0;Target=comp78013_c0_seq1 3 80 .;locus=RLOC_00003580
ChrX	stalkie_big_nohaplotig	exon	62379187	62379687	100	+	.	Parent=comp78013_c0_seq1.mrna1;Target=comp78013_c0_seq1 88 588 -
ChrX	stalkie_big_nohaplotig	exon	62379928	62380014	100	+	.	Parent=comp78013_c0_seq1.mrna1;Target=comp78013_c0_seq1 1 87 -
ChrX	stalkie_big_nohaplotig	CDS	62379935	62380012	.	+	0	Parent=comp78013_c0_seq1.mrna1
ChrX	gffcl	locus	62390178	62390827	.	+	.	ID=RLOC_00003581;geneIDs=comp136295_c0_seq1.path1;transcripts=comp136295_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62390178	62390827	.	+	.	ID=comp136295_c0_seq1.mrna1;geneID=comp136295_c0_seq1.path1;Name=comp136295_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=650;mismatches=0;indels=0;unknowns=0;Target=comp136295_c0_seq1 650 1 .;CDS_Target=comp136295_c0_seq1 569 267 .;locus=RLOC_00003581
ChrX	stalkie_big_nohaplotig	exon	62390178	62390827	100	+	.	Parent=comp136295_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62390444	62390746	.	+	0	Parent=comp136295_c0_seq1.mrna1
ChrX	gffcl	locus	62392504	62393840	.	-	.	ID=RLOC_00003582;geneIDs=FBgn0032213.1.path1;transcripts=FBgn0032213.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62392504	62393840	.	-	.	ID=FBgn0032213.1.mrna1;geneID=FBgn0032213.1.path1;Name=FBgn0032213.1;Dir=sensecoverage=100.0;identity=100.0;matches=1278;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003582
ChrX	stalkie_big_nohaplotig	exon	62392504	62393379	100	-	.	Parent=FBgn0032213.1.mrna1;Target=FBgn0032213.1 403 1278 +
ChrX	stalkie_big_nohaplotig	exon	62393439	62393840	100	-	.	Parent=FBgn0032213.1.mrna1;Target=FBgn0032213.1 1 402 +
ChrX	stalkie_big_nohaplotig	CDS	62392504	62393379	.	-	0	Parent=FBgn0032213.1.mrna1;Target=FBgn0032213.1 403 1278 +
ChrX	stalkie_big_nohaplotig	CDS	62393439	62393840	.	-	0	Parent=FBgn0032213.1.mrna1;Target=FBgn0032213.1 1 402 +
ChrX	gffcl	locus	62415521	62416506	.	-	.	ID=RLOC_00003583;geneIDs=comp158569_c1_seq1.path1;transcripts=comp158569_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62415521	62416506	.	-	.	ID=comp158569_c1_seq1.mrna1;geneID=comp158569_c1_seq1.path1;Name=comp158569_c1_seq1;Dir=sensecoverage=100.0;identity=98.6;matches=915;mismatches=6;indels=7;unknowns=0;Target=comp158569_c1_seq1 360 527 +;locus=RLOC_00003583
ChrX	stalkie_big_nohaplotig	exon	62415521	62416358	98	-	.	Parent=comp158569_c1_seq1.mrna1;Target=comp158569_c1_seq1 84 928 +
ChrX	stalkie_big_nohaplotig	exon	62416424	62416506	100	-	.	Parent=comp158569_c1_seq1.mrna1;Target=comp158569_c1_seq1 1 83 +
ChrX	stalkie_big_nohaplotig	CDS	62415915	62416082	.	-	0	Parent=comp158569_c1_seq1.mrna1
ChrX	gffcl	locus	62436845	62445005	.	+	.	ID=RLOC_00003584;geneIDs=CPIJ000760.1.path1;transcripts=CPIJ000760.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62436845	62445005	.	+	.	ID=CPIJ000760.1.mrna1;geneID=CPIJ000760.1.path1;Name=CPIJ000760.1;Dir=sensecoverage=100.0;identity=100.0;matches=1914;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003584
ChrX	stalkie_big_nohaplotig	exon	62436845	62437213	100	+	.	Parent=CPIJ000760.1.mrna1;Target=CPIJ000760.1 1 369 +
ChrX	stalkie_big_nohaplotig	exon	62443404	62443585	100	+	.	Parent=CPIJ000760.1.mrna1;Target=CPIJ000760.1 370 551 +
ChrX	stalkie_big_nohaplotig	exon	62443643	62445005	100	+	.	Parent=CPIJ000760.1.mrna1;Target=CPIJ000760.1 552 1914 +
ChrX	stalkie_big_nohaplotig	CDS	62436845	62437213	.	+	0	Parent=CPIJ000760.1.mrna1;Target=CPIJ000760.1 1 369 +
ChrX	stalkie_big_nohaplotig	CDS	62443404	62443585	.	+	0	Parent=CPIJ000760.1.mrna1;Target=CPIJ000760.1 370 551 +
ChrX	stalkie_big_nohaplotig	CDS	62443643	62445005	.	+	1	Parent=CPIJ000760.1.mrna1;Target=CPIJ000760.1 552 1914 +
ChrX	gffcl	locus	62457374	62458037	.	-	.	ID=RLOC_00003585;geneIDs=comp113633_c0_seq1.path1;transcripts=comp113633_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62457374	62458037	.	-	.	ID=comp113633_c0_seq1.mrna1;geneID=comp113633_c0_seq1.path1;Name=comp113633_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=584;mismatches=0;indels=0;unknowns=0;Target=comp113633_c0_seq1 60 194 .;locus=RLOC_00003585
ChrX	stalkie_big_nohaplotig	exon	62457374	62457609	100	-	.	Parent=comp113633_c0_seq1.mrna1;Target=comp113633_c0_seq1 1 236 -
ChrX	stalkie_big_nohaplotig	exon	62457690	62458037	100	-	.	Parent=comp113633_c0_seq1.mrna1;Target=comp113633_c0_seq1 237 584 -
ChrX	stalkie_big_nohaplotig	CDS	62457433	62457567	.	-	0	Parent=comp113633_c0_seq1.mrna1
ChrX	gffcl	locus	62466457	62467845	.	+	.	ID=RLOC_00003586;geneIDs=FBgn0032219.1.path1;transcripts=FBgn0032219.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62466457	62467845	.	+	.	ID=FBgn0032219.1.mrna1;geneID=FBgn0032219.1.path1;Name=FBgn0032219.1;Dir=sensecoverage=100.0;identity=100.0;matches=1263;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003586
ChrX	stalkie_big_nohaplotig	exon	62466457	62466556	100	+	.	Parent=FBgn0032219.1.mrna1;Target=FBgn0032219.1 1 100 +
ChrX	stalkie_big_nohaplotig	exon	62466618	62467079	100	+	.	Parent=FBgn0032219.1.mrna1;Target=FBgn0032219.1 101 562 +
ChrX	stalkie_big_nohaplotig	exon	62467145	62467845	100	+	.	Parent=FBgn0032219.1.mrna1;Target=FBgn0032219.1 563 1263 +
ChrX	stalkie_big_nohaplotig	CDS	62466457	62466556	.	+	0	Parent=FBgn0032219.1.mrna1;Target=FBgn0032219.1 1 100 +
ChrX	stalkie_big_nohaplotig	CDS	62466618	62467079	.	+	2	Parent=FBgn0032219.1.mrna1;Target=FBgn0032219.1 101 562 +
ChrX	stalkie_big_nohaplotig	CDS	62467145	62467845	.	+	2	Parent=FBgn0032219.1.mrna1;Target=FBgn0032219.1 563 1263 +
ChrX	gffcl	locus	62489632	62491699	.	-	.	ID=RLOC_00003587;geneIDs=comp147879_c0_seq1.path1;transcripts=comp147879_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62489632	62491699	.	-	.	ID=comp147879_c0_seq1.mrna1;geneID=comp147879_c0_seq1.path1;Name=comp147879_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=2066;mismatches=2;indels=0;unknowns=0;Target=comp147879_c0_seq1 2070 3 .;CDS_Target=comp147879_c0_seq1 1262 1170 .;locus=RLOC_00003587
ChrX	stalkie_big_nohaplotig	exon	62489632	62491699	99	-	.	Parent=comp147879_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62490440	62490532	.	-	0	Parent=comp147879_c0_seq1.mrna1
ChrX	gffcl	locus	62492898	62493550	.	+	.	ID=RLOC_00003588;geneIDs=comp144347_c1_seq1.path1;transcripts=comp144347_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62492898	62493550	.	+	.	ID=comp144347_c1_seq1.mrna1;geneID=comp144347_c1_seq1.path1;Name=comp144347_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=651;mismatches=2;indels=1;unknowns=0;Target=comp144347_c1_seq1 654 1 .;CDS_Target=comp144347_c1_seq1 232 125 .;locus=RLOC_00003588
ChrX	stalkie_big_nohaplotig	exon	62492898	62493550	99	+	.	Parent=comp144347_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62493022	62493129	.	+	0	Parent=comp144347_c1_seq1.mrna1
ChrX	gffcl	locus	62493827	62494184	.	-	.	ID=RLOC_00003589;geneIDs=comp146784_c0_seq1.path1;transcripts=comp146784_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62493827	62494184	.	-	.	ID=comp146784_c0_seq1.mrna1;geneID=comp146784_c0_seq1.path1;Name=comp146784_c0_seq1;Dir=indeterminatecoverage=92.0;identity=100.0;matches=358;mismatches=0;indels=0;unknowns=0;Target=comp146784_c0_seq1 389 32 .;CDS_Target=comp146784_c0_seq1 177 73 .;locus=RLOC_00003589
ChrX	stalkie_big_nohaplotig	exon	62493827	62494184	100	-	.	Parent=comp146784_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62494039	62494143	.	-	0	Parent=comp146784_c0_seq1.mrna1
ChrX	gffcl	locus	62495959	62496457	.	-	.	ID=RLOC_00003590;geneIDs=comp117387_c0_seq1.path1;transcripts=comp117387_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62495959	62496457	.	-	.	ID=comp117387_c0_seq1.mrna1;geneID=comp117387_c0_seq1.path1;Name=comp117387_c0_seq1;Dir=indeterminatecoverage=97.8;identity=99.6;matches=497;mismatches=0;indels=2;unknowns=0;Target=comp117387_c0_seq1 497 1 .;CDS_Target=comp117387_c0_seq1 334 182 .;locus=RLOC_00003590
ChrX	stalkie_big_nohaplotig	exon	62495959	62496457	99	-	.	Parent=comp117387_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62496122	62496274	.	-	0	Parent=comp117387_c0_seq1.mrna1
ChrX	gffcl	locus	62497887	62499406	.	-	.	ID=RLOC_00003591;geneIDs=FBgn0000413.1.path1;transcripts=FBgn0000413.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62497887	62499406	.	-	.	ID=FBgn0000413.1.mrna1;geneID=FBgn0000413.1.path1;Name=FBgn0000413.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1520;mismatches=0;indels=1;unknowns=0;Target=FBgn0000413.1 1521 1 .;locus=RLOC_00003591
ChrX	stalkie_big_nohaplotig	exon	62497887	62499406	99	-	.	Parent=FBgn0000413.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62497887	62499406	.	-	0	Parent=FBgn0000413.1.mrna1
ChrX	gffcl	locus	62523808	62524909	.	+	.	ID=RLOC_00003592;geneIDs=comp132166_c0_seq1.path1;transcripts=comp132166_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62523808	62524909	.	+	.	ID=comp132166_c0_seq1.mrna1;geneID=comp132166_c0_seq1.path1;Name=comp132166_c0_seq1;Dir=sensecoverage=93.0;identity=90.9;matches=884;mismatches=16;indels=72;unknowns=0;locus=RLOC_00003592
ChrX	stalkie_big_nohaplotig	exon	62523808	62524059	99	+	.	Parent=comp132166_c0_seq1.mrna1;Target=comp132166_c0_seq1 1 252 +
ChrX	stalkie_big_nohaplotig	exon	62524118	62524356	100	+	.	Parent=comp132166_c0_seq1.mrna1;Target=comp132166_c0_seq1 253 491 +
ChrX	stalkie_big_nohaplotig	exon	62524429	62524909	82	+	.	Parent=comp132166_c0_seq1.mrna1;Target=comp132166_c0_seq1 492 900 +
ChrX	stalkie_big_nohaplotig	CDS	62523990	62524059	.	+	0	Parent=comp132166_c0_seq1.mrna1;Target=comp132166_c0_seq1 183 252 +
ChrX	stalkie_big_nohaplotig	CDS	62524118	62524356	.	+	2	Parent=comp132166_c0_seq1.mrna1;Target=comp132166_c0_seq1 253 491 +
ChrX	stalkie_big_nohaplotig	CDS	62524429	62524563	.	+	0	Parent=comp132166_c0_seq1.mrna1;Target=comp132166_c0_seq1 492 626 +
ChrX	gffcl	locus	62572016	62579861	.	+	.	ID=RLOC_00003593;geneIDs=FBgn0032218.1.path1,comp157947_c0_seq1.path1;transcripts=comp157947_c0_seq1.mrna1,FBgn0032218.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62572016	62579861	.	+	.	ID=comp157947_c0_seq1.mrna1;geneID=comp157947_c0_seq1.path1;Name=comp157947_c0_seq1;Dir=antisensecoverage=89.0;identity=100.0;matches=2953;mismatches=0;indels=1;unknowns=0;locus=RLOC_00003593
ChrX	stalkie_big_nohaplotig	exon	62572016	62572245	100	+	.	Parent=comp157947_c0_seq1.mrna1;Target=comp157947_c0_seq1 2732 2961 -
ChrX	stalkie_big_nohaplotig	exon	62573057	62573285	100	+	.	Parent=comp157947_c0_seq1.mrna1;Target=comp157947_c0_seq1 2503 2731 -
ChrX	stalkie_big_nohaplotig	exon	62574608	62574807	100	+	.	Parent=comp157947_c0_seq1.mrna1;Target=comp157947_c0_seq1 2303 2502 -
ChrX	stalkie_big_nohaplotig	exon	62575110	62575263	100	+	.	Parent=comp157947_c0_seq1.mrna1;Target=comp157947_c0_seq1 2149 2302 -
ChrX	stalkie_big_nohaplotig	exon	62577667	62579419	100	+	.	Parent=comp157947_c0_seq1.mrna1;Target=comp157947_c0_seq1 396 2148 -
ChrX	stalkie_big_nohaplotig	exon	62579475	62579861	99	+	.	Parent=comp157947_c0_seq1.mrna1;Target=comp157947_c0_seq1 8 395 -
ChrX	stalkie_big_nohaplotig	CDS	62572049	62572245	.	+	0	Parent=comp157947_c0_seq1.mrna1;Target=comp157947_c0_seq1 2732 2928 .
ChrX	stalkie_big_nohaplotig	CDS	62573057	62573285	.	+	1	Parent=comp157947_c0_seq1.mrna1;Target=comp157947_c0_seq1 2503 2731 .
ChrX	stalkie_big_nohaplotig	CDS	62574608	62574807	.	+	0	Parent=comp157947_c0_seq1.mrna1;Target=comp157947_c0_seq1 2303 2502 .
ChrX	stalkie_big_nohaplotig	CDS	62575110	62575263	.	+	1	Parent=comp157947_c0_seq1.mrna1;Target=comp157947_c0_seq1 2149 2302 .
ChrX	stalkie_big_nohaplotig	CDS	62577667	62579419	.	+	0	Parent=comp157947_c0_seq1.mrna1;Target=comp157947_c0_seq1 396 2148 .
ChrX	stalkie_big_nohaplotig	CDS	62579475	62579757	.	+	2	Parent=comp157947_c0_seq1.mrna1;Target=comp157947_c0_seq1 112 395 .
ChrX	stalkie_big_nohaplotig	mRNA	62572034	62579754	.	+	.	ID=FBgn0032218.1.mrna1;geneID=FBgn0032218.1.path1;Name=FBgn0032218.1;Dir=sensecoverage=100.0;identity=100.0;matches=2750;mismatches=0;indels=1;unknowns=0;locus=RLOC_00003593
ChrX	stalkie_big_nohaplotig	exon	62572034	62572245	100	+	.	Parent=FBgn0032218.1.mrna1;Target=FBgn0032218.1 1 212 +
ChrX	stalkie_big_nohaplotig	exon	62573057	62573285	100	+	.	Parent=FBgn0032218.1.mrna1;Target=FBgn0032218.1 213 441 +
ChrX	stalkie_big_nohaplotig	exon	62574608	62574729	100	+	.	Parent=FBgn0032218.1.mrna1;Target=FBgn0032218.1 442 563 +
ChrX	stalkie_big_nohaplotig	exon	62575110	62575263	100	+	.	Parent=FBgn0032218.1.mrna1;Target=FBgn0032218.1 564 717 +
ChrX	stalkie_big_nohaplotig	exon	62577667	62579419	100	+	.	Parent=FBgn0032218.1.mrna1;Target=FBgn0032218.1 718 2470 +
ChrX	stalkie_big_nohaplotig	exon	62579475	62579754	99	+	.	Parent=FBgn0032218.1.mrna1;Target=FBgn0032218.1 2471 2751 +
ChrX	stalkie_big_nohaplotig	CDS	62572034	62572245	.	+	0	Parent=FBgn0032218.1.mrna1;Target=FBgn0032218.1 1 212 +
ChrX	stalkie_big_nohaplotig	CDS	62573057	62573285	.	+	1	Parent=FBgn0032218.1.mrna1;Target=FBgn0032218.1 213 441 +
ChrX	stalkie_big_nohaplotig	CDS	62574608	62574729	.	+	0	Parent=FBgn0032218.1.mrna1;Target=FBgn0032218.1 442 563 +
ChrX	stalkie_big_nohaplotig	CDS	62575110	62575263	.	+	1	Parent=FBgn0032218.1.mrna1;Target=FBgn0032218.1 564 717 +
ChrX	stalkie_big_nohaplotig	CDS	62577667	62579419	.	+	0	Parent=FBgn0032218.1.mrna1;Target=FBgn0032218.1 718 2470 +
ChrX	stalkie_big_nohaplotig	CDS	62579475	62579754	.	+	2	Parent=FBgn0032218.1.mrna1;Target=FBgn0032218.1 2471 2751 +
ChrX	gffcl	locus	62585466	62590102	.	-	.	ID=RLOC_00003594;geneIDs=FBgn0032202.1.path1;transcripts=FBgn0032202.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62585466	62590102	.	-	.	ID=FBgn0032202.1.mrna1;geneID=FBgn0032202.1.path1;Name=FBgn0032202.1;Dir=sensecoverage=100.0;identity=100.0;matches=330;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003594
ChrX	stalkie_big_nohaplotig	exon	62585466	62585491	100	-	.	Parent=FBgn0032202.1.mrna1;Target=FBgn0032202.1 305 330 +
ChrX	stalkie_big_nohaplotig	exon	62585571	62585696	100	-	.	Parent=FBgn0032202.1.mrna1;Target=FBgn0032202.1 179 304 +
ChrX	stalkie_big_nohaplotig	exon	62586698	62586779	100	-	.	Parent=FBgn0032202.1.mrna1;Target=FBgn0032202.1 97 178 +
ChrX	stalkie_big_nohaplotig	exon	62590007	62590102	100	-	.	Parent=FBgn0032202.1.mrna1;Target=FBgn0032202.1 1 96 +
ChrX	stalkie_big_nohaplotig	CDS	62585466	62585491	.	-	2	Parent=FBgn0032202.1.mrna1;Target=FBgn0032202.1 305 330 +
ChrX	stalkie_big_nohaplotig	CDS	62585571	62585696	.	-	2	Parent=FBgn0032202.1.mrna1;Target=FBgn0032202.1 179 304 +
ChrX	stalkie_big_nohaplotig	CDS	62586698	62586779	.	-	0	Parent=FBgn0032202.1.mrna1;Target=FBgn0032202.1 97 178 +
ChrX	stalkie_big_nohaplotig	CDS	62590007	62590102	.	-	0	Parent=FBgn0032202.1.mrna1;Target=FBgn0032202.1 1 96 +
ChrX	gffcl	locus	62594592	62596558	.	+	.	ID=RLOC_00003595;geneIDs=FBgn0032214.1.path1;transcripts=FBgn0032214.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62594592	62596558	.	+	.	ID=FBgn0032214.1.mrna1;geneID=FBgn0032214.1.path1;Name=FBgn0032214.1;Dir=sensecoverage=100.0;identity=100.0;matches=795;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003595
ChrX	stalkie_big_nohaplotig	exon	62594592	62594678	100	+	.	Parent=FBgn0032214.1.mrna1;Target=FBgn0032214.1 1 87 +
ChrX	stalkie_big_nohaplotig	exon	62594784	62595083	100	+	.	Parent=FBgn0032214.1.mrna1;Target=FBgn0032214.1 88 387 +
ChrX	stalkie_big_nohaplotig	exon	62596151	62596558	100	+	.	Parent=FBgn0032214.1.mrna1;Target=FBgn0032214.1 388 795 +
ChrX	stalkie_big_nohaplotig	CDS	62594592	62594678	.	+	0	Parent=FBgn0032214.1.mrna1;Target=FBgn0032214.1 1 87 +
ChrX	stalkie_big_nohaplotig	CDS	62594784	62595083	.	+	0	Parent=FBgn0032214.1.mrna1;Target=FBgn0032214.1 88 387 +
ChrX	stalkie_big_nohaplotig	CDS	62596151	62596558	.	+	0	Parent=FBgn0032214.1.mrna1;Target=FBgn0032214.1 388 795 +
ChrX	gffcl	locus	62600118	62606744	.	-	.	ID=RLOC_00003596;geneIDs=FBgn0262782.1.path1;transcripts=FBgn0262782.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62600118	62606744	.	-	.	ID=FBgn0262782.1.mrna1;geneID=FBgn0262782.1.path1;Name=FBgn0262782.1;Dir=sensecoverage=100.0;identity=100.0;matches=1020;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003596
ChrX	stalkie_big_nohaplotig	exon	62600118	62601113	100	-	.	Parent=FBgn0262782.1.mrna1;Target=FBgn0262782.1 25 1020 +
ChrX	stalkie_big_nohaplotig	exon	62606721	62606744	100	-	.	Parent=FBgn0262782.1.mrna1;Target=FBgn0262782.1 1 24 +
ChrX	stalkie_big_nohaplotig	CDS	62600118	62601113	.	-	0	Parent=FBgn0262782.1.mrna1;Target=FBgn0262782.1 25 1020 +
ChrX	stalkie_big_nohaplotig	CDS	62606721	62606744	.	-	0	Parent=FBgn0262782.1.mrna1;Target=FBgn0262782.1 1 24 +
ChrX	gffcl	locus	62616856	62633813	.	-	.	ID=RLOC_00003597;geneIDs=FBgn0032208.1.path1;transcripts=FBgn0032208.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62616856	62633813	.	-	.	ID=FBgn0032208.1.mrna1;geneID=FBgn0032208.1.path1;Name=FBgn0032208.1;Dir=sensecoverage=99.9;identity=100.0;matches=8496;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003597
ChrX	stalkie_big_nohaplotig	exon	62616856	62617135	100	-	.	Parent=FBgn0032208.1.mrna1;Target=FBgn0032208.1 8223 8502 +
ChrX	stalkie_big_nohaplotig	exon	62617827	62618815	100	-	.	Parent=FBgn0032208.1.mrna1;Target=FBgn0032208.1 7234 8222 +
ChrX	stalkie_big_nohaplotig	exon	62618895	62620025	100	-	.	Parent=FBgn0032208.1.mrna1;Target=FBgn0032208.1 6103 7233 +
ChrX	stalkie_big_nohaplotig	exon	62620730	62620980	100	-	.	Parent=FBgn0032208.1.mrna1;Target=FBgn0032208.1 5852 6102 +
ChrX	stalkie_big_nohaplotig	exon	62621048	62624524	100	-	.	Parent=FBgn0032208.1.mrna1;Target=FBgn0032208.1 2375 5851 +
ChrX	stalkie_big_nohaplotig	exon	62629674	62629715	100	-	.	Parent=FBgn0032208.1.mrna1;Target=FBgn0032208.1 2333 2374 +
ChrX	stalkie_big_nohaplotig	exon	62630347	62630565	100	-	.	Parent=FBgn0032208.1.mrna1;Target=FBgn0032208.1 2114 2332 +
ChrX	stalkie_big_nohaplotig	exon	62630617	62630869	100	-	.	Parent=FBgn0032208.1.mrna1;Target=FBgn0032208.1 1861 2113 +
ChrX	stalkie_big_nohaplotig	exon	62631882	62633595	100	-	.	Parent=FBgn0032208.1.mrna1;Target=FBgn0032208.1 147 1860 +
ChrX	stalkie_big_nohaplotig	exon	62633674	62633813	100	-	.	Parent=FBgn0032208.1.mrna1;Target=FBgn0032208.1 7 146 +
ChrX	stalkie_big_nohaplotig	CDS	62616856	62617135	.	-	1	Parent=FBgn0032208.1.mrna1;Target=FBgn0032208.1 8223 8502 +
ChrX	stalkie_big_nohaplotig	CDS	62617827	62618815	.	-	0	Parent=FBgn0032208.1.mrna1;Target=FBgn0032208.1 7234 8222 +
ChrX	stalkie_big_nohaplotig	CDS	62618895	62620025	.	-	0	Parent=FBgn0032208.1.mrna1;Target=FBgn0032208.1 6103 7233 +
ChrX	stalkie_big_nohaplotig	CDS	62620730	62620980	.	-	2	Parent=FBgn0032208.1.mrna1;Target=FBgn0032208.1 5852 6102 +
ChrX	stalkie_big_nohaplotig	CDS	62621048	62624524	.	-	2	Parent=FBgn0032208.1.mrna1;Target=FBgn0032208.1 2375 5851 +
ChrX	stalkie_big_nohaplotig	CDS	62629674	62629715	.	-	2	Parent=FBgn0032208.1.mrna1;Target=FBgn0032208.1 2333 2374 +
ChrX	stalkie_big_nohaplotig	CDS	62630347	62630565	.	-	2	Parent=FBgn0032208.1.mrna1;Target=FBgn0032208.1 2114 2332 +
ChrX	stalkie_big_nohaplotig	CDS	62630617	62630869	.	-	0	Parent=FBgn0032208.1.mrna1;Target=FBgn0032208.1 1861 2113 +
ChrX	stalkie_big_nohaplotig	CDS	62631882	62633595	.	-	1	Parent=FBgn0032208.1.mrna1;Target=FBgn0032208.1 147 1860 +
ChrX	stalkie_big_nohaplotig	CDS	62633674	62633813	.	-	0	Parent=FBgn0032208.1.mrna1;Target=FBgn0032208.1 7 146 +
ChrX	gffcl	locus	62624956	62625203	.	-	.	ID=RLOC_00003598;geneIDs=comp135418_c0_seq1.path1;transcripts=comp135418_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62624956	62625203	.	-	.	ID=comp135418_c0_seq1.mrna1;geneID=comp135418_c0_seq1.path1;Name=comp135418_c0_seq1;Dir=indeterminatecoverage=82.4;identity=93.1;matches=231;mismatches=17;indels=0;unknowns=0;Target=comp135418_c0_seq1 248 1 .;CDS_Target=comp135418_c0_seq1 66 1 .;locus=RLOC_00003598
ChrX	stalkie_big_nohaplotig	exon	62624956	62625203	93	-	.	Parent=comp135418_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62625138	62625203	.	-	0	Parent=comp135418_c0_seq1.mrna1
ChrX	gffcl	locus	62653830	62654828	.	+	.	ID=RLOC_00003599;geneIDs=ORF1780.path1;transcripts=ORF1780.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62653830	62654828	.	+	.	ID=ORF1780.mrna1;geneID=ORF1780.path1;Name=ORF1780;Dir=indeterminatecoverage=100.0;identity=100.0;matches=999;mismatches=0;indels=0;unknowns=0;Target=ORF1780 999 1 .;locus=RLOC_00003599
ChrX	stalkie_big_nohaplotig	exon	62653830	62654828	100	+	.	Parent=ORF1780.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62653830	62654828	.	+	0	Parent=ORF1780.mrna1
ChrX	gffcl	locus	62657745	62661069	.	-	.	ID=RLOC_00003600;geneIDs=comp163046_c0_seq1.path1;transcripts=comp163046_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62657745	62661069	.	-	.	ID=comp163046_c0_seq1.mrna1;geneID=comp163046_c0_seq1.path1;Name=comp163046_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.8;matches=3320;mismatches=5;indels=69;unknowns=0;Target=comp163046_c0_seq1 3396 3 .;CDS_Target=comp163046_c0_seq1 2661 2464 .;locus=RLOC_00003600
ChrX	stalkie_big_nohaplotig	exon	62657745	62661069	97	-	.	Parent=comp163046_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62658480	62658677	.	-	0	Parent=comp163046_c0_seq1.mrna1
ChrX	gffcl	locus	62661793	62666688	.	+	.	ID=RLOC_00003601;geneIDs=comp162629_c2_seq1.path1;transcripts=comp162629_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62661793	62666688	.	+	.	ID=comp162629_c2_seq1.mrna1;geneID=comp162629_c2_seq1.path1;Name=comp162629_c2_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=4649;mismatches=1;indels=2;unknowns=0;Target=comp162629_c2_seq1 870 1019 .;locus=RLOC_00003601
ChrX	stalkie_big_nohaplotig	exon	62661793	62662164	100	+	.	Parent=comp162629_c2_seq1.mrna1;Target=comp162629_c2_seq1 4281 4652 -
ChrX	stalkie_big_nohaplotig	exon	62662411	62666688	99	+	.	Parent=comp162629_c2_seq1.mrna1;Target=comp162629_c2_seq1 1 4280 -
ChrX	stalkie_big_nohaplotig	CDS	62665672	62665820	.	+	0	Parent=comp162629_c2_seq1.mrna1
ChrX	gffcl	locus	62702227	62703755	.	+	.	ID=RLOC_00003604;geneIDs=comp158300_c1_seq1.path1;transcripts=comp158300_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62702227	62703755	.	+	.	ID=comp158300_c1_seq1.mrna1;geneID=comp158300_c1_seq1.path1;Name=comp158300_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1525;mismatches=4;indels=0;unknowns=0;Target=comp158300_c1_seq1 1529 1 .;CDS_Target=comp158300_c1_seq1 651 484 .;locus=RLOC_00003604
ChrX	stalkie_big_nohaplotig	exon	62702227	62703755	99	+	.	Parent=comp158300_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62702710	62702877	.	+	0	Parent=comp158300_c1_seq1.mrna1
ChrX	gffcl	locus	62706252	62708089	.	-	.	ID=RLOC_00003605;geneIDs=comp156766_c1_seq1.path1;transcripts=comp156766_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62706252	62708089	.	-	.	ID=comp156766_c1_seq1.mrna1;geneID=comp156766_c1_seq1.path1;Name=comp156766_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1834;mismatches=4;indels=0;unknowns=0;Target=comp156766_c1_seq1 1838 1 .;CDS_Target=comp156766_c1_seq1 1803 1588 .;locus=RLOC_00003605
ChrX	stalkie_big_nohaplotig	exon	62706252	62708089	99	-	.	Parent=comp156766_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62706287	62706502	.	-	0	Parent=comp156766_c1_seq1.mrna1
ChrX	gffcl	locus	62725152	62725823	.	.	.	ID=RLOC_00003606;geneIDs=comp174711_c0_seq1.path1,comp692464_c0_seq1.path1;transcripts=comp174711_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62725462	62725823	.	+	.	ID=comp174711_c0_seq1.mrna1;geneID=comp174711_c0_seq1.path1;Name=comp174711_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=362;mismatches=0;indels=0;unknowns=0;Target=comp174711_c0_seq1 362 1 .;CDS_Target=comp174711_c0_seq1 209 3 .;locus=RLOC_00003606
ChrX	stalkie_big_nohaplotig	exon	62725462	62725823	100	+	.	Parent=comp174711_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62725464	62725670	.	+	0	Parent=comp174711_c0_seq1.mrna1
ChrX	gffcl	locus	62773506	62785120	.	+	.	ID=RLOC_00003607;geneIDs=FBgn0263780.1.path1;transcripts=FBgn0263780.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62773506	62785120	.	+	.	ID=FBgn0263780.1.mrna1;geneID=FBgn0263780.1.path1;Name=FBgn0263780.1;Dir=sensecoverage=100.0;identity=100.0;matches=2601;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003607
ChrX	stalkie_big_nohaplotig	exon	62773506	62773744	100	+	.	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 1 239 +
ChrX	stalkie_big_nohaplotig	exon	62779787	62780060	100	+	.	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 240 513 +
ChrX	stalkie_big_nohaplotig	exon	62780135	62780402	100	+	.	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 514 781 +
ChrX	stalkie_big_nohaplotig	exon	62780466	62780760	100	+	.	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 782 1076 +
ChrX	stalkie_big_nohaplotig	exon	62781699	62781831	100	+	.	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 1077 1209 +
ChrX	stalkie_big_nohaplotig	exon	62781908	62782096	100	+	.	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 1210 1398 +
ChrX	stalkie_big_nohaplotig	exon	62782217	62782341	100	+	.	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 1399 1523 +
ChrX	stalkie_big_nohaplotig	exon	62782403	62782789	100	+	.	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 1524 1910 +
ChrX	stalkie_big_nohaplotig	exon	62782848	62783033	100	+	.	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 1911 2096 +
ChrX	stalkie_big_nohaplotig	exon	62783093	62783250	100	+	.	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 2097 2254 +
ChrX	stalkie_big_nohaplotig	exon	62783312	62783517	100	+	.	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 2255 2460 +
ChrX	stalkie_big_nohaplotig	exon	62784980	62785120	100	+	.	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 2461 2601 +
ChrX	stalkie_big_nohaplotig	CDS	62773506	62773744	.	+	0	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 1 239 +
ChrX	stalkie_big_nohaplotig	CDS	62779787	62780060	.	+	1	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 240 513 +
ChrX	stalkie_big_nohaplotig	CDS	62780135	62780402	.	+	0	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 514 781 +
ChrX	stalkie_big_nohaplotig	CDS	62780466	62780760	.	+	2	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 782 1076 +
ChrX	stalkie_big_nohaplotig	CDS	62781699	62781831	.	+	1	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 1077 1209 +
ChrX	stalkie_big_nohaplotig	CDS	62781908	62782096	.	+	0	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 1210 1398 +
ChrX	stalkie_big_nohaplotig	CDS	62782217	62782341	.	+	0	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 1399 1523 +
ChrX	stalkie_big_nohaplotig	CDS	62782403	62782789	.	+	1	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 1524 1910 +
ChrX	stalkie_big_nohaplotig	CDS	62782848	62783033	.	+	1	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 1911 2096 +
ChrX	stalkie_big_nohaplotig	CDS	62783093	62783250	.	+	1	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 2097 2254 +
ChrX	stalkie_big_nohaplotig	CDS	62783312	62783517	.	+	2	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 2255 2460 +
ChrX	stalkie_big_nohaplotig	CDS	62784980	62785120	.	+	0	Parent=FBgn0263780.1.mrna1;Target=FBgn0263780.1 2461 2601 +
ChrX	gffcl	locus	62789373	62789848	.	-	.	ID=RLOC_00003608;geneIDs=comp127254_c0_seq1.path1;transcripts=comp127254_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62789373	62789848	.	-	.	ID=comp127254_c0_seq1.mrna1;geneID=comp127254_c0_seq1.path1;Name=comp127254_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=476;mismatches=0;indels=0;unknowns=0;Target=comp127254_c0_seq1 476 1 .;CDS_Target=comp127254_c0_seq1 454 392 .;locus=RLOC_00003608
ChrX	stalkie_big_nohaplotig	exon	62789373	62789848	100	-	.	Parent=comp127254_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62789395	62789457	.	-	0	Parent=comp127254_c0_seq1.mrna1
ChrX	gffcl	locus	62790007	62790530	.	+	.	ID=RLOC_00003609;geneIDs=comp150979_c1_seq1.path1;transcripts=comp150979_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62790007	62790530	.	+	.	ID=comp150979_c1_seq1.mrna1;geneID=comp150979_c1_seq1.path1;Name=comp150979_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=524;mismatches=0;indels=0;unknowns=0;Target=comp150979_c1_seq1 524 1 .;CDS_Target=comp150979_c1_seq1 101 3 .;locus=RLOC_00003609
ChrX	stalkie_big_nohaplotig	exon	62790007	62790530	100	+	.	Parent=comp150979_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62790009	62790107	.	+	0	Parent=comp150979_c1_seq1.mrna1
ChrX	gffcl	locus	62790564	62793725	.	+	.	ID=RLOC_00003610;geneIDs=comp162510_c2_seq1.path1;transcripts=comp162510_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62790564	62793725	.	+	.	ID=comp162510_c2_seq1.mrna1;geneID=comp162510_c2_seq1.path1;Name=comp162510_c2_seq1;Dir=indeterminatecoverage=93.8;identity=99.4;matches=3142;mismatches=20;indels=0;unknowns=0;Target=comp162510_c2_seq1 3234 73 .;CDS_Target=comp162510_c2_seq1 405 73 .;locus=RLOC_00003610
ChrX	stalkie_big_nohaplotig	exon	62790564	62793725	99	+	.	Parent=comp162510_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62790564	62790896	.	+	0	Parent=comp162510_c2_seq1.mrna1
ChrX	gffcl	locus	62795027	62796173	.	+	.	ID=RLOC_00003611;geneIDs=comp149042_c0_seq1.path1;transcripts=comp149042_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62795027	62796173	.	+	.	ID=comp149042_c0_seq1.mrna1;geneID=comp149042_c0_seq1.path1;Name=comp149042_c0_seq1;Dir=indeterminatecoverage=97.2;identity=99.9;matches=1146;mismatches=1;indels=0;unknowns=0;Target=comp149042_c0_seq1 1180 34 .;CDS_Target=comp149042_c0_seq1 717 481 .;locus=RLOC_00003611
ChrX	stalkie_big_nohaplotig	exon	62795027	62796173	99	+	.	Parent=comp149042_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62795474	62795710	.	+	0	Parent=comp149042_c0_seq1.mrna1
ChrX	gffcl	locus	62803078	62804569	.	+	.	ID=RLOC_00003612;geneIDs=comp159754_c1_seq1.path1;transcripts=comp159754_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62803078	62804569	.	+	.	ID=comp159754_c1_seq1.mrna1;geneID=comp159754_c1_seq1.path1;Name=comp159754_c1_seq1;Dir=indeterminatecoverage=96.8;identity=95.7;matches=1453;mismatches=39;indels=26;unknowns=0;Target=comp159754_c1_seq1 1568 51 .;CDS_Target=comp159754_c1_seq1 663 400 .;locus=RLOC_00003612
ChrX	stalkie_big_nohaplotig	exon	62803078	62804569	95	+	.	Parent=comp159754_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62803424	62803687	.	+	0	Parent=comp159754_c1_seq1.mrna1
ChrX	gffcl	locus	62811535	62813256	.	-	.	ID=RLOC_00003613;geneIDs=comp150536_c1_seq1.path1;transcripts=comp150536_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62811535	62813256	.	-	.	ID=comp150536_c1_seq1.mrna1;geneID=comp150536_c1_seq1.path1;Name=comp150536_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1722;mismatches=0;indels=0;unknowns=0;Target=comp150536_c1_seq1 1722 1 .;CDS_Target=comp150536_c1_seq1 633 523 .;locus=RLOC_00003613
ChrX	stalkie_big_nohaplotig	exon	62811535	62813256	100	-	.	Parent=comp150536_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62812624	62812734	.	-	0	Parent=comp150536_c1_seq1.mrna1
ChrX	gffcl	locus	62815538	62816152	.	-	.	ID=RLOC_00003614;geneIDs=comp142054_c1_seq1.path1;transcripts=comp142054_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62815538	62816152	.	-	.	ID=comp142054_c1_seq1.mrna1;geneID=comp142054_c1_seq1.path1;Name=comp142054_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=614;mismatches=1;indels=16;unknowns=0;Target=comp142054_c1_seq1 631 1 .;CDS_Target=comp142054_c1_seq1 595 458 .;locus=RLOC_00003614
ChrX	stalkie_big_nohaplotig	exon	62815538	62816152	97	-	.	Parent=comp142054_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62815558	62815695	.	-	0	Parent=comp142054_c1_seq1.mrna1
ChrX	gffcl	locus	62816154	62818034	.	-	.	ID=RLOC_00003615;geneIDs=comp159545_c0_seq1.path1;transcripts=comp159545_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62816154	62818034	.	-	.	ID=comp159545_c0_seq1.mrna1;geneID=comp159545_c0_seq1.path1;Name=comp159545_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1875;mismatches=6;indels=14;unknowns=0;Target=comp159545_c0_seq1 1895 1 .;CDS_Target=comp159545_c0_seq1 759 709 .;locus=RLOC_00003615
ChrX	stalkie_big_nohaplotig	exon	62816154	62818034	98	-	.	Parent=comp159545_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62817276	62817326	.	-	0	Parent=comp159545_c0_seq1.mrna1
ChrX	gffcl	locus	62818671	62819724	.	+	.	ID=RLOC_00003616;geneIDs=comp157392_c0_seq1.path1;transcripts=comp157392_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62818671	62819724	.	+	.	ID=comp157392_c0_seq1.mrna1;geneID=comp157392_c0_seq1.path1;Name=comp157392_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.7;matches=1053;mismatches=1;indels=2;unknowns=0;Target=comp157392_c0_seq1 1062 7 .;CDS_Target=comp157392_c0_seq1 1061 945 .;locus=RLOC_00003616
ChrX	stalkie_big_nohaplotig	exon	62818671	62819724	99	+	.	Parent=comp157392_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62819607	62819723	.	+	0	Parent=comp157392_c0_seq1.mrna1
ChrX	gffcl	locus	62820324	62850109	.	-	.	ID=RLOC_00003617;geneIDs=FBgn0026379.1.path1,comp157222_c0_seq1.path1;transcripts=comp157222_c0_seq1.mrna1,FBgn0026379.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62820324	62850109	.	-	.	ID=comp157222_c0_seq1.mrna1;geneID=comp157222_c0_seq1.path1;Name=comp157222_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=4558;mismatches=1;indels=1;unknowns=0;locus=RLOC_00003617
ChrX	stalkie_big_nohaplotig	exon	62820324	62822486	99	-	.	Parent=comp157222_c0_seq1.mrna1;Target=comp157222_c0_seq1 2397 4560 +
ChrX	stalkie_big_nohaplotig	exon	62831093	62831873	100	-	.	Parent=comp157222_c0_seq1.mrna1;Target=comp157222_c0_seq1 1616 2396 +
ChrX	stalkie_big_nohaplotig	exon	62832013	62832122	100	-	.	Parent=comp157222_c0_seq1.mrna1;Target=comp157222_c0_seq1 1506 1615 +
ChrX	stalkie_big_nohaplotig	exon	62832189	62832354	100	-	.	Parent=comp157222_c0_seq1.mrna1;Target=comp157222_c0_seq1 1340 1505 +
ChrX	stalkie_big_nohaplotig	exon	62835046	62835150	100	-	.	Parent=comp157222_c0_seq1.mrna1;Target=comp157222_c0_seq1 1235 1339 +
ChrX	stalkie_big_nohaplotig	exon	62835210	62835397	100	-	.	Parent=comp157222_c0_seq1.mrna1;Target=comp157222_c0_seq1 1047 1234 +
ChrX	stalkie_big_nohaplotig	exon	62835458	62835602	100	-	.	Parent=comp157222_c0_seq1.mrna1;Target=comp157222_c0_seq1 902 1046 +
ChrX	stalkie_big_nohaplotig	exon	62835664	62835833	100	-	.	Parent=comp157222_c0_seq1.mrna1;Target=comp157222_c0_seq1 732 901 +
ChrX	stalkie_big_nohaplotig	exon	62838538	62838671	100	-	.	Parent=comp157222_c0_seq1.mrna1;Target=comp157222_c0_seq1 598 731 +
ChrX	stalkie_big_nohaplotig	exon	62849513	62850109	99	-	.	Parent=comp157222_c0_seq1.mrna1;Target=comp157222_c0_seq1 1 597 +
ChrX	stalkie_big_nohaplotig	CDS	62821909	62822486	.	-	2	Parent=comp157222_c0_seq1.mrna1;Target=comp157222_c0_seq1 2397 2974 +
ChrX	stalkie_big_nohaplotig	CDS	62831093	62831873	.	-	0	Parent=comp157222_c0_seq1.mrna1;Target=comp157222_c0_seq1 1616 2396 +
ChrX	stalkie_big_nohaplotig	CDS	62832013	62832122	.	-	2	Parent=comp157222_c0_seq1.mrna1;Target=comp157222_c0_seq1 1506 1615 +
ChrX	stalkie_big_nohaplotig	CDS	62832189	62832354	.	-	0	Parent=comp157222_c0_seq1.mrna1;Target=comp157222_c0_seq1 1340 1505 +
ChrX	stalkie_big_nohaplotig	CDS	62835046	62835150	.	-	0	Parent=comp157222_c0_seq1.mrna1;Target=comp157222_c0_seq1 1235 1339 +
ChrX	stalkie_big_nohaplotig	CDS	62835210	62835397	.	-	2	Parent=comp157222_c0_seq1.mrna1;Target=comp157222_c0_seq1 1047 1234 +
ChrX	stalkie_big_nohaplotig	CDS	62835458	62835602	.	-	0	Parent=comp157222_c0_seq1.mrna1;Target=comp157222_c0_seq1 902 1046 +
ChrX	stalkie_big_nohaplotig	CDS	62835664	62835833	.	-	2	Parent=comp157222_c0_seq1.mrna1;Target=comp157222_c0_seq1 732 901 +
ChrX	stalkie_big_nohaplotig	CDS	62838538	62838634	.	-	0	Parent=comp157222_c0_seq1.mrna1;Target=comp157222_c0_seq1 635 731 +
ChrX	stalkie_big_nohaplotig	mRNA	62821912	62838652	.	-	.	ID=FBgn0026379.1.mrna1;geneID=FBgn0026379.1.path1;Name=FBgn0026379.1;Dir=sensecoverage=100.0;identity=100.0;matches=2286;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003617
ChrX	stalkie_big_nohaplotig	exon	62821912	62822486	100	-	.	Parent=FBgn0026379.1.mrna1;Target=FBgn0026379.1 1712 2286 +
ChrX	stalkie_big_nohaplotig	exon	62831093	62831473	100	-	.	Parent=FBgn0026379.1.mrna1;Target=FBgn0026379.1 1331 1711 +
ChrX	stalkie_big_nohaplotig	exon	62831543	62831873	100	-	.	Parent=FBgn0026379.1.mrna1;Target=FBgn0026379.1 1000 1330 +
ChrX	stalkie_big_nohaplotig	exon	62832013	62832122	100	-	.	Parent=FBgn0026379.1.mrna1;Target=FBgn0026379.1 890 999 +
ChrX	stalkie_big_nohaplotig	exon	62832189	62832354	100	-	.	Parent=FBgn0026379.1.mrna1;Target=FBgn0026379.1 724 889 +
ChrX	stalkie_big_nohaplotig	exon	62835046	62835150	100	-	.	Parent=FBgn0026379.1.mrna1;Target=FBgn0026379.1 619 723 +
ChrX	stalkie_big_nohaplotig	exon	62835210	62835397	100	-	.	Parent=FBgn0026379.1.mrna1;Target=FBgn0026379.1 431 618 +
ChrX	stalkie_big_nohaplotig	exon	62835458	62835602	100	-	.	Parent=FBgn0026379.1.mrna1;Target=FBgn0026379.1 286 430 +
ChrX	stalkie_big_nohaplotig	exon	62835664	62835833	100	-	.	Parent=FBgn0026379.1.mrna1;Target=FBgn0026379.1 116 285 +
ChrX	stalkie_big_nohaplotig	exon	62838538	62838652	100	-	.	Parent=FBgn0026379.1.mrna1;Target=FBgn0026379.1 1 115 +
ChrX	stalkie_big_nohaplotig	CDS	62821912	62822486	.	-	2	Parent=FBgn0026379.1.mrna1;Target=FBgn0026379.1 1712 2286 +
ChrX	stalkie_big_nohaplotig	CDS	62831093	62831473	.	-	2	Parent=FBgn0026379.1.mrna1;Target=FBgn0026379.1 1331 1711 +
ChrX	stalkie_big_nohaplotig	CDS	62831543	62831873	.	-	0	Parent=FBgn0026379.1.mrna1;Target=FBgn0026379.1 1000 1330 +
ChrX	stalkie_big_nohaplotig	CDS	62832013	62832122	.	-	2	Parent=FBgn0026379.1.mrna1;Target=FBgn0026379.1 890 999 +
ChrX	stalkie_big_nohaplotig	CDS	62832189	62832354	.	-	0	Parent=FBgn0026379.1.mrna1;Target=FBgn0026379.1 724 889 +
ChrX	stalkie_big_nohaplotig	CDS	62835046	62835150	.	-	0	Parent=FBgn0026379.1.mrna1;Target=FBgn0026379.1 619 723 +
ChrX	stalkie_big_nohaplotig	CDS	62835210	62835397	.	-	2	Parent=FBgn0026379.1.mrna1;Target=FBgn0026379.1 431 618 +
ChrX	stalkie_big_nohaplotig	CDS	62835458	62835602	.	-	0	Parent=FBgn0026379.1.mrna1;Target=FBgn0026379.1 286 430 +
ChrX	stalkie_big_nohaplotig	CDS	62835664	62835833	.	-	2	Parent=FBgn0026379.1.mrna1;Target=FBgn0026379.1 116 285 +
ChrX	stalkie_big_nohaplotig	CDS	62838538	62838652	.	-	0	Parent=FBgn0026379.1.mrna1;Target=FBgn0026379.1 1 115 +
ChrX	gffcl	locus	62825025	62825281	.	+	.	ID=RLOC_00003618;geneIDs=comp632535_c0_seq1.path1;transcripts=comp632535_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62825025	62825281	.	+	.	ID=comp632535_c0_seq1.mrna1;geneID=comp632535_c0_seq1.path1;Name=comp632535_c0_seq1;Dir=indeterminatecoverage=93.1;identity=100.0;matches=257;mismatches=0;indels=0;unknowns=0;Target=comp632535_c0_seq1 257 1 .;CDS_Target=comp632535_c0_seq1 154 2 .;locus=RLOC_00003618
ChrX	stalkie_big_nohaplotig	exon	62825025	62825281	100	+	.	Parent=comp632535_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62825026	62825178	.	+	0	Parent=comp632535_c0_seq1.mrna1
ChrX	gffcl	locus	62825623	62825840	.	+	.	ID=RLOC_00003619;geneIDs=comp104096_c0_seq1.path1;transcripts=comp104096_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62825623	62825840	.	+	.	ID=comp104096_c0_seq1.mrna1;geneID=comp104096_c0_seq1.path1;Name=comp104096_c0_seq1;Dir=indeterminatecoverage=97.3;identity=100.0;matches=218;mismatches=0;indels=0;unknowns=0;Target=comp104096_c0_seq1 218 1 .;CDS_Target=comp104096_c0_seq1 217 134 .;locus=RLOC_00003619
ChrX	stalkie_big_nohaplotig	exon	62825623	62825840	100	+	.	Parent=comp104096_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62825756	62825839	.	+	0	Parent=comp104096_c0_seq1.mrna1
ChrX	gffcl	locus	62858788	62864245	.	+	.	ID=RLOC_00003621;geneIDs=FBgn0037439.1.path1;transcripts=FBgn0037439.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62858788	62864245	.	+	.	ID=FBgn0037439.1.mrna1;geneID=FBgn0037439.1.path1;Name=FBgn0037439.1;Dir=sensecoverage=99.9;identity=100.0;matches=2064;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003621
ChrX	stalkie_big_nohaplotig	exon	62858788	62859625	100	+	.	Parent=FBgn0037439.1.mrna1;Target=FBgn0037439.1 4 841 +
ChrX	stalkie_big_nohaplotig	exon	62859710	62859889	100	+	.	Parent=FBgn0037439.1.mrna1;Target=FBgn0037439.1 842 1021 +
ChrX	stalkie_big_nohaplotig	exon	62860011	62860160	100	+	.	Parent=FBgn0037439.1.mrna1;Target=FBgn0037439.1 1022 1171 +
ChrX	stalkie_big_nohaplotig	exon	62860222	62860370	100	+	.	Parent=FBgn0037439.1.mrna1;Target=FBgn0037439.1 1172 1320 +
ChrX	stalkie_big_nohaplotig	exon	62860426	62860502	100	+	.	Parent=FBgn0037439.1.mrna1;Target=FBgn0037439.1 1321 1397 +
ChrX	stalkie_big_nohaplotig	exon	62860548	62860803	100	+	.	Parent=FBgn0037439.1.mrna1;Target=FBgn0037439.1 1398 1653 +
ChrX	stalkie_big_nohaplotig	exon	62863692	62863832	100	+	.	Parent=FBgn0037439.1.mrna1;Target=FBgn0037439.1 1654 1794 +
ChrX	stalkie_big_nohaplotig	exon	62863902	62864039	100	+	.	Parent=FBgn0037439.1.mrna1;Target=FBgn0037439.1 1795 1932 +
ChrX	stalkie_big_nohaplotig	exon	62864111	62864245	100	+	.	Parent=FBgn0037439.1.mrna1;Target=FBgn0037439.1 1933 2067 +
ChrX	stalkie_big_nohaplotig	CDS	62858788	62859625	.	+	0	Parent=FBgn0037439.1.mrna1;Target=FBgn0037439.1 4 841 +
ChrX	stalkie_big_nohaplotig	CDS	62859710	62859889	.	+	2	Parent=FBgn0037439.1.mrna1;Target=FBgn0037439.1 842 1021 +
ChrX	stalkie_big_nohaplotig	CDS	62860011	62860160	.	+	2	Parent=FBgn0037439.1.mrna1;Target=FBgn0037439.1 1022 1171 +
ChrX	stalkie_big_nohaplotig	CDS	62860222	62860370	.	+	2	Parent=FBgn0037439.1.mrna1;Target=FBgn0037439.1 1172 1320 +
ChrX	stalkie_big_nohaplotig	CDS	62860426	62860502	.	+	0	Parent=FBgn0037439.1.mrna1;Target=FBgn0037439.1 1321 1397 +
ChrX	stalkie_big_nohaplotig	CDS	62860548	62860803	.	+	1	Parent=FBgn0037439.1.mrna1;Target=FBgn0037439.1 1398 1653 +
ChrX	stalkie_big_nohaplotig	CDS	62863692	62863832	.	+	0	Parent=FBgn0037439.1.mrna1;Target=FBgn0037439.1 1654 1794 +
ChrX	stalkie_big_nohaplotig	CDS	62863902	62864039	.	+	0	Parent=FBgn0037439.1.mrna1;Target=FBgn0037439.1 1795 1932 +
ChrX	stalkie_big_nohaplotig	CDS	62864111	62864245	.	+	0	Parent=FBgn0037439.1.mrna1;Target=FBgn0037439.1 1933 2067 +
ChrX	gffcl	locus	62869117	62869466	.	-	.	ID=RLOC_00003622;geneIDs=comp175604_c0_seq1.path1;transcripts=comp175604_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62869117	62869466	.	-	.	ID=comp175604_c0_seq1.mrna1;geneID=comp175604_c0_seq1.path1;Name=comp175604_c0_seq1;Dir=indeterminatecoverage=95.9;identity=100.0;matches=350;mismatches=0;indels=0;unknowns=0;Target=comp175604_c0_seq1 350 1 .;CDS_Target=comp175604_c0_seq1 146 3 .;locus=RLOC_00003622
ChrX	stalkie_big_nohaplotig	exon	62869117	62869466	100	-	.	Parent=comp175604_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62869321	62869464	.	-	0	Parent=comp175604_c0_seq1.mrna1
ChrX	gffcl	locus	62870139	62898111	.	.	.	ID=RLOC_00003623;geneIDs=FBgn0020908.1.path1,comp161181_c0_seq1.path1;transcripts=FBgn0020908.1.mrna1,comp161181_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62870139	62898111	.	-	.	ID=FBgn0020908.1.mrna1;geneID=FBgn0020908.1.path1;Name=FBgn0020908.1;Dir=sensecoverage=100.0;identity=100.0;matches=588;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003623
ChrX	stalkie_big_nohaplotig	exon	62870139	62870252	100	-	.	Parent=FBgn0020908.1.mrna1;Target=FBgn0020908.1 475 588 +
ChrX	stalkie_big_nohaplotig	exon	62871825	62871977	100	-	.	Parent=FBgn0020908.1.mrna1;Target=FBgn0020908.1 322 474 +
ChrX	stalkie_big_nohaplotig	exon	62872041	62872121	100	-	.	Parent=FBgn0020908.1.mrna1;Target=FBgn0020908.1 241 321 +
ChrX	stalkie_big_nohaplotig	exon	62872281	62872447	100	-	.	Parent=FBgn0020908.1.mrna1;Target=FBgn0020908.1 74 240 +
ChrX	stalkie_big_nohaplotig	exon	62898039	62898111	100	-	.	Parent=FBgn0020908.1.mrna1;Target=FBgn0020908.1 1 73 +
ChrX	stalkie_big_nohaplotig	CDS	62870139	62870252	.	-	0	Parent=FBgn0020908.1.mrna1;Target=FBgn0020908.1 475 588 +
ChrX	stalkie_big_nohaplotig	CDS	62871825	62871977	.	-	0	Parent=FBgn0020908.1.mrna1;Target=FBgn0020908.1 322 474 +
ChrX	stalkie_big_nohaplotig	CDS	62872041	62872121	.	-	0	Parent=FBgn0020908.1.mrna1;Target=FBgn0020908.1 241 321 +
ChrX	stalkie_big_nohaplotig	CDS	62872281	62872447	.	-	2	Parent=FBgn0020908.1.mrna1;Target=FBgn0020908.1 74 240 +
ChrX	stalkie_big_nohaplotig	CDS	62898039	62898111	.	-	0	Parent=FBgn0020908.1.mrna1;Target=FBgn0020908.1 1 73 +
ChrX	stalkie_big_nohaplotig	mRNA	62870230	62871847	.	+	.	ID=comp161181_c0_seq1.mrna1;geneID=comp161181_c0_seq1.path1;Name=comp161181_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1618;mismatches=0;indels=0;unknowns=0;Target=comp161181_c0_seq1 1618 1 .;CDS_Target=comp161181_c0_seq1 700 293 .;locus=RLOC_00003623
ChrX	stalkie_big_nohaplotig	exon	62870230	62871847	100	+	.	Parent=comp161181_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62870522	62870929	.	+	0	Parent=comp161181_c0_seq1.mrna1
ChrX	gffcl	locus	62874246	62875343	.	-	.	ID=RLOC_00003624;geneIDs=comp1782226_c0_seq1.path1;transcripts=comp1782226_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62874246	62875343	.	-	.	ID=comp1782226_c0_seq1.mrna1;geneID=comp1782226_c0_seq1.path1;Name=comp1782226_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1098;mismatches=0;indels=0;unknowns=0;Target=comp1782226_c0_seq1 1098 1 .;CDS_Target=comp1782226_c0_seq1 746 672 .;locus=RLOC_00003624
ChrX	stalkie_big_nohaplotig	exon	62874246	62875343	100	-	.	Parent=comp1782226_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62874598	62874672	.	-	0	Parent=comp1782226_c0_seq1.mrna1
ChrX	gffcl	locus	62877262	62878813	.	+	.	ID=RLOC_00003625;geneIDs=ORF659.path10;transcripts=ORF659.mrna10
ChrX	stalkie_big_nohaplotig	mRNA	62877262	62878813	.	+	.	ID=ORF659.mrna10;geneID=ORF659.path10;Name=ORF659;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1550;mismatches=2;indels=2;unknowns=0;Target=ORF659 1554 1 .;CDS_Target=ORF659 107 3 .;locus=RLOC_00003625
ChrX	stalkie_big_nohaplotig	exon	62877262	62878813	99	+	.	Parent=ORF659.mrna10
ChrX	stalkie_big_nohaplotig	CDS	62877264	62877367	.	+	0	Parent=ORF659.mrna10
ChrX	gffcl	locus	62881977	62882500	.	-	.	ID=RLOC_00003626;geneIDs=comp851597_c0_seq1.path1;transcripts=comp851597_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62881977	62882500	.	-	.	ID=comp851597_c0_seq1.mrna1;geneID=comp851597_c0_seq1.path1;Name=comp851597_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=524;mismatches=0;indels=0;unknowns=0;Target=comp851597_c0_seq1 524 1 .;CDS_Target=comp851597_c0_seq1 80 3 .;locus=RLOC_00003626
ChrX	stalkie_big_nohaplotig	exon	62881977	62882500	100	-	.	Parent=comp851597_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62882421	62882498	.	-	0	Parent=comp851597_c0_seq1.mrna1
ChrX	gffcl	locus	62898240	62898508	.	-	.	ID=RLOC_00003627;geneIDs=comp47360_c0_seq1.path1;transcripts=comp47360_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62898240	62898508	.	-	.	ID=comp47360_c0_seq1.mrna1;geneID=comp47360_c0_seq1.path1;Name=comp47360_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=269;mismatches=0;indels=0;unknowns=0;Target=comp47360_c0_seq1 269 1 .;CDS_Target=comp47360_c0_seq1 56 3 .;locus=RLOC_00003627
ChrX	stalkie_big_nohaplotig	exon	62898240	62898508	100	-	.	Parent=comp47360_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62898453	62898506	.	-	0	Parent=comp47360_c0_seq1.mrna1
ChrX	gffcl	locus	62945606	62988237	.	-	.	ID=RLOC_00003628;geneIDs=FBgn0024320.1.path1,comp144153_c0_seq1.path1,comp158887_c1_seq1.path1;transcripts=comp158887_c1_seq1.mrna1,FBgn0024320.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62946296	62988237	.	-	.	ID=comp158887_c1_seq1.mrna1;geneID=comp158887_c1_seq1.path1;Name=comp158887_c1_seq1;Dir=sensecoverage=99.5;identity=100.0;matches=5875;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003628
ChrX	stalkie_big_nohaplotig	exon	62946296	62946893	99	-	.	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 5281 5878 +
ChrX	stalkie_big_nohaplotig	exon	62949881	62950142	100	-	.	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 5019 5280 +
ChrX	stalkie_big_nohaplotig	exon	62952083	62952955	100	-	.	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 4146 5018 +
ChrX	stalkie_big_nohaplotig	exon	62953021	62954410	100	-	.	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 2756 4145 +
ChrX	stalkie_big_nohaplotig	exon	62954794	62955090	100	-	.	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 2459 2755 +
ChrX	stalkie_big_nohaplotig	exon	62955200	62955522	100	-	.	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 2136 2458 +
ChrX	stalkie_big_nohaplotig	exon	62958615	62958737	100	-	.	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 2013 2135 +
ChrX	stalkie_big_nohaplotig	exon	62962370	62962562	100	-	.	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 1820 2012 +
ChrX	stalkie_big_nohaplotig	exon	62965112	62965336	100	-	.	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 1595 1819 +
ChrX	stalkie_big_nohaplotig	exon	62965485	62965561	100	-	.	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 1518 1594 +
ChrX	stalkie_big_nohaplotig	exon	62965650	62965806	100	-	.	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 1361 1517 +
ChrX	stalkie_big_nohaplotig	exon	62965901	62966071	100	-	.	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 1190 1360 +
ChrX	stalkie_big_nohaplotig	exon	62987051	62988237	100	-	.	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 3 1189 +
ChrX	stalkie_big_nohaplotig	CDS	62950054	62950142	.	-	2	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 5019 5107 +
ChrX	stalkie_big_nohaplotig	CDS	62952083	62952955	.	-	2	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 4146 5018 +
ChrX	stalkie_big_nohaplotig	CDS	62953021	62954410	.	-	0	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 2756 4145 +
ChrX	stalkie_big_nohaplotig	CDS	62954794	62955090	.	-	0	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 2459 2755 +
ChrX	stalkie_big_nohaplotig	CDS	62955200	62955522	.	-	2	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 2136 2458 +
ChrX	stalkie_big_nohaplotig	CDS	62958615	62958737	.	-	2	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 2013 2135 +
ChrX	stalkie_big_nohaplotig	CDS	62962370	62962562	.	-	0	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 1820 2012 +
ChrX	stalkie_big_nohaplotig	CDS	62965112	62965336	.	-	0	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 1595 1819 +
ChrX	stalkie_big_nohaplotig	CDS	62965485	62965561	.	-	2	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 1518 1594 +
ChrX	stalkie_big_nohaplotig	CDS	62965650	62965806	.	-	0	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 1361 1517 +
ChrX	stalkie_big_nohaplotig	CDS	62965901	62966071	.	-	0	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 1190 1360 +
ChrX	stalkie_big_nohaplotig	CDS	62987051	62987149	.	-	0	Parent=comp158887_c1_seq1.mrna1;Target=comp158887_c1_seq1 1091 1189 +
ChrX	stalkie_big_nohaplotig	mRNA	62950065	62987215	.	-	.	ID=FBgn0024320.1.mrna1;geneID=FBgn0024320.1.path1;Name=FBgn0024320.1;Dir=sensecoverage=99.9;identity=100.0;matches=3949;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003628
ChrX	stalkie_big_nohaplotig	exon	62950065	62950142	100	-	.	Parent=FBgn0024320.1.mrna1;Target=FBgn0024320.1 3872 3949 +
ChrX	stalkie_big_nohaplotig	exon	62952083	62952955	100	-	.	Parent=FBgn0024320.1.mrna1;Target=FBgn0024320.1 2999 3871 +
ChrX	stalkie_big_nohaplotig	exon	62953021	62954410	100	-	.	Parent=FBgn0024320.1.mrna1;Target=FBgn0024320.1 1609 2998 +
ChrX	stalkie_big_nohaplotig	exon	62954794	62955090	100	-	.	Parent=FBgn0024320.1.mrna1;Target=FBgn0024320.1 1312 1608 +
ChrX	stalkie_big_nohaplotig	exon	62955200	62955522	100	-	.	Parent=FBgn0024320.1.mrna1;Target=FBgn0024320.1 989 1311 +
ChrX	stalkie_big_nohaplotig	exon	62962370	62962562	100	-	.	Parent=FBgn0024320.1.mrna1;Target=FBgn0024320.1 796 988 +
ChrX	stalkie_big_nohaplotig	exon	62965112	62965336	100	-	.	Parent=FBgn0024320.1.mrna1;Target=FBgn0024320.1 571 795 +
ChrX	stalkie_big_nohaplotig	exon	62965485	62965561	100	-	.	Parent=FBgn0024320.1.mrna1;Target=FBgn0024320.1 494 570 +
ChrX	stalkie_big_nohaplotig	exon	62965650	62965806	100	-	.	Parent=FBgn0024320.1.mrna1;Target=FBgn0024320.1 337 493 +
ChrX	stalkie_big_nohaplotig	exon	62965901	62966071	100	-	.	Parent=FBgn0024320.1.mrna1;Target=FBgn0024320.1 166 336 +
ChrX	stalkie_big_nohaplotig	exon	62987051	62987215	100	-	.	Parent=FBgn0024320.1.mrna1;Target=FBgn0024320.1 1 165 +
ChrX	stalkie_big_nohaplotig	CDS	62950066	62950142	.	-	2	Parent=FBgn0024320.1.mrna1;Target=FBgn0024320.1 3872 3948 +
ChrX	stalkie_big_nohaplotig	CDS	62952083	62952955	.	-	2	Parent=FBgn0024320.1.mrna1;Target=FBgn0024320.1 2999 3871 +
ChrX	stalkie_big_nohaplotig	CDS	62953021	62954410	.	-	0	Parent=FBgn0024320.1.mrna1;Target=FBgn0024320.1 1609 2998 +
ChrX	stalkie_big_nohaplotig	CDS	62954794	62955090	.	-	0	Parent=FBgn0024320.1.mrna1;Target=FBgn0024320.1 1312 1608 +
ChrX	stalkie_big_nohaplotig	CDS	62955200	62955522	.	-	2	Parent=FBgn0024320.1.mrna1;Target=FBgn0024320.1 989 1311 +
ChrX	stalkie_big_nohaplotig	CDS	62962370	62962562	.	-	0	Parent=FBgn0024320.1.mrna1;Target=FBgn0024320.1 796 988 +
ChrX	stalkie_big_nohaplotig	CDS	62965112	62965336	.	-	0	Parent=FBgn0024320.1.mrna1;Target=FBgn0024320.1 571 795 +
ChrX	stalkie_big_nohaplotig	CDS	62965485	62965561	.	-	2	Parent=FBgn0024320.1.mrna1;Target=FBgn0024320.1 494 570 +
ChrX	stalkie_big_nohaplotig	CDS	62965650	62965806	.	-	0	Parent=FBgn0024320.1.mrna1;Target=FBgn0024320.1 337 493 +
ChrX	stalkie_big_nohaplotig	CDS	62965901	62966071	.	-	0	Parent=FBgn0024320.1.mrna1;Target=FBgn0024320.1 166 336 +
ChrX	stalkie_big_nohaplotig	CDS	62987051	62987215	.	-	0	Parent=FBgn0024320.1.mrna1;Target=FBgn0024320.1 1 165 +
ChrX	gffcl	locus	62947530	62948375	.	-	.	ID=RLOC_00003629;geneIDs=comp152391_c0_seq1.path1;transcripts=comp152391_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62947530	62948375	.	-	.	ID=comp152391_c0_seq1.mrna1;geneID=comp152391_c0_seq1.path1;Name=comp152391_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.8;matches=844;mismatches=1;indels=1;unknowns=0;Target=comp152391_c0_seq1 859 15 .;CDS_Target=comp152391_c0_seq1 390 283 .;locus=RLOC_00003629
ChrX	stalkie_big_nohaplotig	exon	62947530	62948375	99	-	.	Parent=comp152391_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62948000	62948107	.	-	0	Parent=comp152391_c0_seq1.mrna1
ChrX	gffcl	locus	62948835	62949568	.	-	.	ID=RLOC_00003630;geneIDs=comp152392_c0_seq1.path1;transcripts=comp152392_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62948835	62949568	.	-	.	ID=comp152392_c0_seq1.mrna1;geneID=comp152392_c0_seq1.path1;Name=comp152392_c0_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=734;mismatches=0;indels=0;unknowns=0;Target=comp152392_c0_seq1 737 4 .;CDS_Target=comp152392_c0_seq1 129 4 .;locus=RLOC_00003630
ChrX	stalkie_big_nohaplotig	exon	62948835	62949568	100	-	.	Parent=comp152392_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62949443	62949568	.	-	0	Parent=comp152392_c0_seq1.mrna1
ChrX	gffcl	locus	62950253	62951011	.	+	.	ID=RLOC_00003631;geneIDs=comp147669_c1_seq1.path1;transcripts=comp147669_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62950253	62951011	.	+	.	ID=comp147669_c1_seq1.mrna1;geneID=comp147669_c1_seq1.path1;Name=comp147669_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=759;mismatches=0;indels=0;unknowns=0;Target=comp147669_c1_seq1 759 1 .;CDS_Target=comp147669_c1_seq1 260 72 .;locus=RLOC_00003631
ChrX	stalkie_big_nohaplotig	exon	62950253	62951011	100	+	.	Parent=comp147669_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	62950324	62950512	.	+	0	Parent=comp147669_c1_seq1.mrna1
ChrX	gffcl	locus	62990825	62992543	.	+	.	ID=RLOC_00003632;geneIDs=comp157524_c0_seq1.path1;transcripts=comp157524_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	62990825	62992543	.	+	.	ID=comp157524_c0_seq1.mrna1;geneID=comp157524_c0_seq1.path1;Name=comp157524_c0_seq1;Dir=antisensecoverage=97.7;identity=99.4;matches=1461;mismatches=7;indels=2;unknowns=0;Target=comp157524_c0_seq1 876 1211 .;locus=RLOC_00003632
ChrX	stalkie_big_nohaplotig	exon	62990825	62991086	100	+	.	Parent=comp157524_c0_seq1.mrna1;Target=comp157524_c0_seq1 1227 1488 -
ChrX	stalkie_big_nohaplotig	exon	62991144	62991519	99	+	.	Parent=comp157524_c0_seq1.mrna1;Target=comp157524_c0_seq1 850 1226 -
ChrX	stalkie_big_nohaplotig	exon	62991652	62992355	98	+	.	Parent=comp157524_c0_seq1.mrna1;Target=comp157524_c0_seq1 147 849 -
ChrX	stalkie_big_nohaplotig	exon	62992417	62992543	100	+	.	Parent=comp157524_c0_seq1.mrna1;Target=comp157524_c0_seq1 20 146 -
ChrX	stalkie_big_nohaplotig	CDS	62991159	62991493	.	+	0	Parent=comp157524_c0_seq1.mrna1
ChrX	gffcl	locus	63008351	63009457	.	+	.	ID=RLOC_00003633;geneIDs=FBgn0032785.1.path1;transcripts=FBgn0032785.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63008351	63009457	.	+	.	ID=FBgn0032785.1.mrna1;geneID=FBgn0032785.1.path1;Name=FBgn0032785.1;Dir=sensecoverage=100.0;identity=100.0;matches=1017;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003633
ChrX	stalkie_big_nohaplotig	exon	63008351	63008965	100	+	.	Parent=FBgn0032785.1.mrna1;Target=FBgn0032785.1 1 615 +
ChrX	stalkie_big_nohaplotig	exon	63009056	63009457	100	+	.	Parent=FBgn0032785.1.mrna1;Target=FBgn0032785.1 616 1017 +
ChrX	stalkie_big_nohaplotig	CDS	63008351	63008965	.	+	0	Parent=FBgn0032785.1.mrna1;Target=FBgn0032785.1 1 615 +
ChrX	stalkie_big_nohaplotig	CDS	63009056	63009457	.	+	0	Parent=FBgn0032785.1.mrna1;Target=FBgn0032785.1 616 1017 +
ChrX	gffcl	locus	63013206	63045508	.	+	.	ID=RLOC_00003634;geneIDs=AGAP003616.1.path1;transcripts=AGAP003616.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63013206	63045508	.	+	.	ID=AGAP003616.1.mrna1;geneID=AGAP003616.1.path1;Name=AGAP003616.1;Dir=sensecoverage=100.0;identity=100.0;matches=6462;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003634
ChrX	stalkie_big_nohaplotig	exon	63013206	63013316	100	+	.	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 1 111 +
ChrX	stalkie_big_nohaplotig	exon	63013382	63013495	100	+	.	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 112 225 +
ChrX	stalkie_big_nohaplotig	exon	63016223	63016339	100	+	.	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 226 342 +
ChrX	stalkie_big_nohaplotig	exon	63016601	63017568	100	+	.	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 343 1310 +
ChrX	stalkie_big_nohaplotig	exon	63019756	63019930	100	+	.	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 1311 1485 +
ChrX	stalkie_big_nohaplotig	exon	63021301	63021422	100	+	.	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 1486 1607 +
ChrX	stalkie_big_nohaplotig	exon	63023264	63023380	100	+	.	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 1608 1724 +
ChrX	stalkie_big_nohaplotig	exon	63023444	63023731	100	+	.	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 1725 2012 +
ChrX	stalkie_big_nohaplotig	exon	63025927	63026113	100	+	.	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 2013 2199 +
ChrX	stalkie_big_nohaplotig	exon	63026202	63026361	100	+	.	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 2200 2359 +
ChrX	stalkie_big_nohaplotig	exon	63026418	63026571	100	+	.	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 2360 2513 +
ChrX	stalkie_big_nohaplotig	exon	63026632	63026872	100	+	.	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 2514 2754 +
ChrX	stalkie_big_nohaplotig	exon	63027657	63028159	100	+	.	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 2755 3257 +
ChrX	stalkie_big_nohaplotig	exon	63028215	63028388	100	+	.	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 3258 3431 +
ChrX	stalkie_big_nohaplotig	exon	63028839	63029037	100	+	.	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 3432 3630 +
ChrX	stalkie_big_nohaplotig	exon	63029096	63029327	100	+	.	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 3631 3862 +
ChrX	stalkie_big_nohaplotig	exon	63029387	63029685	100	+	.	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 3863 4161 +
ChrX	stalkie_big_nohaplotig	exon	63040020	63040537	100	+	.	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 4162 4679 +
ChrX	stalkie_big_nohaplotig	exon	63040601	63040997	100	+	.	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 4680 5076 +
ChrX	stalkie_big_nohaplotig	exon	63042863	63043057	100	+	.	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 5077 5271 +
ChrX	stalkie_big_nohaplotig	exon	63044318	63045508	100	+	.	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 5272 6462 +
ChrX	stalkie_big_nohaplotig	CDS	63013206	63013316	.	+	0	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 1 111 +
ChrX	stalkie_big_nohaplotig	CDS	63013382	63013495	.	+	0	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 112 225 +
ChrX	stalkie_big_nohaplotig	CDS	63016223	63016339	.	+	0	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 226 342 +
ChrX	stalkie_big_nohaplotig	CDS	63016601	63017568	.	+	0	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 343 1310 +
ChrX	stalkie_big_nohaplotig	CDS	63019756	63019930	.	+	1	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 1311 1485 +
ChrX	stalkie_big_nohaplotig	CDS	63021301	63021422	.	+	0	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 1486 1607 +
ChrX	stalkie_big_nohaplotig	CDS	63023264	63023380	.	+	1	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 1608 1724 +
ChrX	stalkie_big_nohaplotig	CDS	63023444	63023731	.	+	1	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 1725 2012 +
ChrX	stalkie_big_nohaplotig	CDS	63025927	63026113	.	+	1	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 2013 2199 +
ChrX	stalkie_big_nohaplotig	CDS	63026202	63026361	.	+	0	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 2200 2359 +
ChrX	stalkie_big_nohaplotig	CDS	63026418	63026571	.	+	2	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 2360 2513 +
ChrX	stalkie_big_nohaplotig	CDS	63026632	63026872	.	+	1	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 2514 2754 +
ChrX	stalkie_big_nohaplotig	CDS	63027657	63028159	.	+	0	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 2755 3257 +
ChrX	stalkie_big_nohaplotig	CDS	63028215	63028388	.	+	1	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 3258 3431 +
ChrX	stalkie_big_nohaplotig	CDS	63028839	63029037	.	+	1	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 3432 3630 +
ChrX	stalkie_big_nohaplotig	CDS	63029096	63029327	.	+	0	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 3631 3862 +
ChrX	stalkie_big_nohaplotig	CDS	63029387	63029685	.	+	2	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 3863 4161 +
ChrX	stalkie_big_nohaplotig	CDS	63040020	63040537	.	+	0	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 4162 4679 +
ChrX	stalkie_big_nohaplotig	CDS	63040601	63040997	.	+	1	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 4680 5076 +
ChrX	stalkie_big_nohaplotig	CDS	63042863	63043057	.	+	0	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 5077 5271 +
ChrX	stalkie_big_nohaplotig	CDS	63044318	63045508	.	+	0	Parent=AGAP003616.1.mrna1;Target=AGAP003616.1 5272 6462 +
ChrX	gffcl	locus	63032026	63035739	.	-	.	ID=RLOC_00003635;geneIDs=FBgn0010407.1.path1;transcripts=FBgn0010407.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63032026	63035739	.	-	.	ID=FBgn0010407.1.mrna1;geneID=FBgn0010407.1.path1;Name=FBgn0010407.1;Dir=sensecoverage=100.0;identity=100.0;matches=2259;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003635
ChrX	stalkie_big_nohaplotig	exon	63032026	63032265	100	-	.	Parent=FBgn0010407.1.mrna1;Target=FBgn0010407.1 2020 2259 +
ChrX	stalkie_big_nohaplotig	exon	63032329	63032461	100	-	.	Parent=FBgn0010407.1.mrna1;Target=FBgn0010407.1 1887 2019 +
ChrX	stalkie_big_nohaplotig	exon	63032519	63032966	100	-	.	Parent=FBgn0010407.1.mrna1;Target=FBgn0010407.1 1439 1886 +
ChrX	stalkie_big_nohaplotig	exon	63033040	63033247	100	-	.	Parent=FBgn0010407.1.mrna1;Target=FBgn0010407.1 1231 1438 +
ChrX	stalkie_big_nohaplotig	exon	63033309	63033522	100	-	.	Parent=FBgn0010407.1.mrna1;Target=FBgn0010407.1 1017 1230 +
ChrX	stalkie_big_nohaplotig	exon	63033581	63034228	100	-	.	Parent=FBgn0010407.1.mrna1;Target=FBgn0010407.1 369 1016 +
ChrX	stalkie_big_nohaplotig	exon	63034290	63034435	100	-	.	Parent=FBgn0010407.1.mrna1;Target=FBgn0010407.1 223 368 +
ChrX	stalkie_big_nohaplotig	exon	63034503	63034557	100	-	.	Parent=FBgn0010407.1.mrna1;Target=FBgn0010407.1 168 222 +
ChrX	stalkie_big_nohaplotig	exon	63035573	63035739	100	-	.	Parent=FBgn0010407.1.mrna1;Target=FBgn0010407.1 1 167 +
ChrX	stalkie_big_nohaplotig	CDS	63032026	63032265	.	-	0	Parent=FBgn0010407.1.mrna1;Target=FBgn0010407.1 2020 2259 +
ChrX	stalkie_big_nohaplotig	CDS	63032329	63032461	.	-	1	Parent=FBgn0010407.1.mrna1;Target=FBgn0010407.1 1887 2019 +
ChrX	stalkie_big_nohaplotig	CDS	63032519	63032966	.	-	2	Parent=FBgn0010407.1.mrna1;Target=FBgn0010407.1 1439 1886 +
ChrX	stalkie_big_nohaplotig	CDS	63033040	63033247	.	-	0	Parent=FBgn0010407.1.mrna1;Target=FBgn0010407.1 1231 1438 +
ChrX	stalkie_big_nohaplotig	CDS	63033309	63033522	.	-	1	Parent=FBgn0010407.1.mrna1;Target=FBgn0010407.1 1017 1230 +
ChrX	stalkie_big_nohaplotig	CDS	63033581	63034228	.	-	1	Parent=FBgn0010407.1.mrna1;Target=FBgn0010407.1 369 1016 +
ChrX	stalkie_big_nohaplotig	CDS	63034290	63034435	.	-	0	Parent=FBgn0010407.1.mrna1;Target=FBgn0010407.1 223 368 +
ChrX	stalkie_big_nohaplotig	CDS	63034503	63034557	.	-	1	Parent=FBgn0010407.1.mrna1;Target=FBgn0010407.1 168 222 +
ChrX	stalkie_big_nohaplotig	CDS	63035573	63035739	.	-	0	Parent=FBgn0010407.1.mrna1;Target=FBgn0010407.1 1 167 +
ChrX	gffcl	locus	63049988	63052381	.	-	.	ID=RLOC_00003636;geneIDs=AGAP003615.1.path1;transcripts=AGAP003615.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63049988	63052381	.	-	.	ID=AGAP003615.1.mrna1;geneID=AGAP003615.1.path1;Name=AGAP003615.1;Dir=sensecoverage=100.0;identity=100.0;matches=831;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003636
ChrX	stalkie_big_nohaplotig	exon	63049988	63050095	100	-	.	Parent=AGAP003615.1.mrna1;Target=AGAP003615.1 724 831 +
ChrX	stalkie_big_nohaplotig	exon	63050165	63050710	100	-	.	Parent=AGAP003615.1.mrna1;Target=AGAP003615.1 178 723 +
ChrX	stalkie_big_nohaplotig	exon	63052149	63052262	100	-	.	Parent=AGAP003615.1.mrna1;Target=AGAP003615.1 64 177 +
ChrX	stalkie_big_nohaplotig	exon	63052319	63052381	100	-	.	Parent=AGAP003615.1.mrna1;Target=AGAP003615.1 1 63 +
ChrX	stalkie_big_nohaplotig	CDS	63049988	63050095	.	-	0	Parent=AGAP003615.1.mrna1;Target=AGAP003615.1 724 831 +
ChrX	stalkie_big_nohaplotig	CDS	63050165	63050710	.	-	0	Parent=AGAP003615.1.mrna1;Target=AGAP003615.1 178 723 +
ChrX	stalkie_big_nohaplotig	CDS	63052149	63052262	.	-	0	Parent=AGAP003615.1.mrna1;Target=AGAP003615.1 64 177 +
ChrX	stalkie_big_nohaplotig	CDS	63052319	63052381	.	-	0	Parent=AGAP003615.1.mrna1;Target=AGAP003615.1 1 63 +
ChrX	gffcl	locus	63055926	63057260	.	+	.	ID=RLOC_00003637;geneIDs=FBgn0032195.1.path1;transcripts=FBgn0032195.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63055926	63057260	.	+	.	ID=FBgn0032195.1.mrna1;geneID=FBgn0032195.1.path1;Name=FBgn0032195.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1335;mismatches=0;indels=0;unknowns=0;Target=FBgn0032195.1 1335 1 .;locus=RLOC_00003637
ChrX	stalkie_big_nohaplotig	exon	63055926	63057260	100	+	.	Parent=FBgn0032195.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	63055926	63057260	.	+	0	Parent=FBgn0032195.1.mrna1
ChrX	gffcl	locus	63090196	63096407	.	+	.	ID=RLOC_00003638;geneIDs=FBgn0032197.1.path2,FBgn0032197.2.path1;transcripts=FBgn0032197.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63090196	63095625	.	+	.	ID=FBgn0032197.2.mrna1;geneID=FBgn0032197.2.path1;Name=FBgn0032197.2;Dir=sensecoverage=99.7;identity=94.0;matches=1371;mismatches=79;indels=9;unknowns=0;locus=RLOC_00003638
ChrX	stalkie_big_nohaplotig	exon	63090196	63090453	100	+	.	Parent=FBgn0032197.2.mrna1;Target=FBgn0032197.2 1 258 +
ChrX	stalkie_big_nohaplotig	exon	63090519	63090716	100	+	.	Parent=FBgn0032197.2.mrna1;Target=FBgn0032197.2 259 456 +
ChrX	stalkie_big_nohaplotig	exon	63091960	63092127	100	+	.	Parent=FBgn0032197.2.mrna1;Target=FBgn0032197.2 457 624 +
ChrX	stalkie_big_nohaplotig	exon	63094800	63095625	89	+	.	Parent=FBgn0032197.2.mrna1;Target=FBgn0032197.2 625 1459 +
ChrX	stalkie_big_nohaplotig	CDS	63090196	63090453	.	+	0	Parent=FBgn0032197.2.mrna1;Target=FBgn0032197.2 1 258 +
ChrX	stalkie_big_nohaplotig	CDS	63090519	63090716	.	+	0	Parent=FBgn0032197.2.mrna1;Target=FBgn0032197.2 259 456 +
ChrX	stalkie_big_nohaplotig	CDS	63091960	63092127	.	+	0	Parent=FBgn0032197.2.mrna1;Target=FBgn0032197.2 457 624 +
ChrX	stalkie_big_nohaplotig	CDS	63094800	63095624	.	+	0	Parent=FBgn0032197.2.mrna1;Target=FBgn0032197.2 625 1458 +
ChrX	gffcl	locus	63098909	63099202	.	+	.	ID=RLOC_00003639;geneIDs=comp49080_c0_seq1.path1;transcripts=comp49080_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63098909	63099202	.	+	.	ID=comp49080_c0_seq1.mrna1;geneID=comp49080_c0_seq1.path1;Name=comp49080_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.7;matches=293;mismatches=1;indels=0;unknowns=0;Target=comp49080_c0_seq1 294 1 .;CDS_Target=comp49080_c0_seq1 98 3 .;locus=RLOC_00003639
ChrX	stalkie_big_nohaplotig	exon	63098909	63099202	99	+	.	Parent=comp49080_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	63098911	63099006	.	+	0	Parent=comp49080_c0_seq1.mrna1
ChrX	gffcl	locus	63110194	63116157	.	+	.	ID=RLOC_00003640;geneIDs=FBgn0032200.1.path1;transcripts=FBgn0032200.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63110194	63116157	.	+	.	ID=FBgn0032200.1.mrna1;geneID=FBgn0032200.1.path1;Name=FBgn0032200.1;Dir=sensecoverage=100.0;identity=100.0;matches=696;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003640
ChrX	stalkie_big_nohaplotig	exon	63110194	63110318	100	+	.	Parent=FBgn0032200.1.mrna1;Target=FBgn0032200.1 1 125 +
ChrX	stalkie_big_nohaplotig	exon	63110414	63110608	100	+	.	Parent=FBgn0032200.1.mrna1;Target=FBgn0032200.1 126 320 +
ChrX	stalkie_big_nohaplotig	exon	63112666	63112861	100	+	.	Parent=FBgn0032200.1.mrna1;Target=FBgn0032200.1 321 516 +
ChrX	stalkie_big_nohaplotig	exon	63115978	63116157	100	+	.	Parent=FBgn0032200.1.mrna1;Target=FBgn0032200.1 517 696 +
ChrX	stalkie_big_nohaplotig	CDS	63110194	63110318	.	+	0	Parent=FBgn0032200.1.mrna1;Target=FBgn0032200.1 1 125 +
ChrX	stalkie_big_nohaplotig	CDS	63110414	63110608	.	+	1	Parent=FBgn0032200.1.mrna1;Target=FBgn0032200.1 126 320 +
ChrX	stalkie_big_nohaplotig	CDS	63112666	63112861	.	+	1	Parent=FBgn0032200.1.mrna1;Target=FBgn0032200.1 321 516 +
ChrX	stalkie_big_nohaplotig	CDS	63115978	63116157	.	+	0	Parent=FBgn0032200.1.mrna1;Target=FBgn0032200.1 517 696 +
ChrX	gffcl	locus	63120881	63122140	.	+	.	ID=RLOC_00003641;geneIDs=FBgn0005322.1.path1;transcripts=FBgn0005322.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63120881	63122140	.	+	.	ID=FBgn0005322.1.mrna1;geneID=FBgn0005322.1.path1;Name=FBgn0005322.1;Dir=sensecoverage=100.0;identity=100.0;matches=1200;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003641
ChrX	stalkie_big_nohaplotig	exon	63120881	63121089	100	+	.	Parent=FBgn0005322.1.mrna1;Target=FBgn0005322.1 1 209 +
ChrX	stalkie_big_nohaplotig	exon	63121150	63122140	100	+	.	Parent=FBgn0005322.1.mrna1;Target=FBgn0005322.1 210 1200 +
ChrX	stalkie_big_nohaplotig	CDS	63120881	63121089	.	+	0	Parent=FBgn0005322.1.mrna1;Target=FBgn0005322.1 1 209 +
ChrX	stalkie_big_nohaplotig	CDS	63121150	63122140	.	+	1	Parent=FBgn0005322.1.mrna1;Target=FBgn0005322.1 210 1200 +
ChrX	gffcl	locus	63155697	63174357	.	.	.	ID=RLOC_00003642;geneIDs=FBgn0260749.1.path1,comp151853_c0_seq1.path1,comp162014_c2_seq1.path1;transcripts=FBgn0260749.1.mrna1,comp162014_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63155697	63172880	.	+	.	ID=FBgn0260749.1.mrna1;geneID=FBgn0260749.1.path1;Name=FBgn0260749.1;Dir=sensecoverage=100.0;identity=100.0;matches=2955;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003642
ChrX	stalkie_big_nohaplotig	exon	63155697	63155738	100	+	.	Parent=FBgn0260749.1.mrna1;Target=FBgn0260749.1 1 42 +
ChrX	stalkie_big_nohaplotig	exon	63160454	63160783	100	+	.	Parent=FBgn0260749.1.mrna1;Target=FBgn0260749.1 43 372 +
ChrX	stalkie_big_nohaplotig	exon	63166107	63166737	100	+	.	Parent=FBgn0260749.1.mrna1;Target=FBgn0260749.1 373 1003 +
ChrX	stalkie_big_nohaplotig	exon	63167428	63168293	100	+	.	Parent=FBgn0260749.1.mrna1;Target=FBgn0260749.1 1004 1869 +
ChrX	stalkie_big_nohaplotig	exon	63168490	63168614	100	+	.	Parent=FBgn0260749.1.mrna1;Target=FBgn0260749.1 1870 1994 +
ChrX	stalkie_big_nohaplotig	exon	63168929	63169348	100	+	.	Parent=FBgn0260749.1.mrna1;Target=FBgn0260749.1 1995 2414 +
ChrX	stalkie_big_nohaplotig	exon	63170863	63171072	100	+	.	Parent=FBgn0260749.1.mrna1;Target=FBgn0260749.1 2415 2624 +
ChrX	stalkie_big_nohaplotig	exon	63171137	63171263	100	+	.	Parent=FBgn0260749.1.mrna1;Target=FBgn0260749.1 2625 2751 +
ChrX	stalkie_big_nohaplotig	exon	63172677	63172880	100	+	.	Parent=FBgn0260749.1.mrna1;Target=FBgn0260749.1 2752 2955 +
ChrX	stalkie_big_nohaplotig	CDS	63155697	63155738	.	+	0	Parent=FBgn0260749.1.mrna1;Target=FBgn0260749.1 1 42 +
ChrX	stalkie_big_nohaplotig	CDS	63160454	63160783	.	+	0	Parent=FBgn0260749.1.mrna1;Target=FBgn0260749.1 43 372 +
ChrX	stalkie_big_nohaplotig	CDS	63166107	63166737	.	+	0	Parent=FBgn0260749.1.mrna1;Target=FBgn0260749.1 373 1003 +
ChrX	stalkie_big_nohaplotig	CDS	63167428	63168293	.	+	2	Parent=FBgn0260749.1.mrna1;Target=FBgn0260749.1 1004 1869 +
ChrX	stalkie_big_nohaplotig	CDS	63168490	63168614	.	+	0	Parent=FBgn0260749.1.mrna1;Target=FBgn0260749.1 1870 1994 +
ChrX	stalkie_big_nohaplotig	CDS	63168929	63169348	.	+	1	Parent=FBgn0260749.1.mrna1;Target=FBgn0260749.1 1995 2414 +
ChrX	stalkie_big_nohaplotig	CDS	63170863	63171072	.	+	1	Parent=FBgn0260749.1.mrna1;Target=FBgn0260749.1 2415 2624 +
ChrX	stalkie_big_nohaplotig	CDS	63171137	63171263	.	+	1	Parent=FBgn0260749.1.mrna1;Target=FBgn0260749.1 2625 2751 +
ChrX	stalkie_big_nohaplotig	CDS	63172677	63172880	.	+	0	Parent=FBgn0260749.1.mrna1;Target=FBgn0260749.1 2752 2955 +
ChrX	stalkie_big_nohaplotig	mRNA	63157457	63173221	.	+	.	ID=comp162014_c2_seq1.mrna1;geneID=comp162014_c2_seq1.path1;Name=comp162014_c2_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=3787;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003642
ChrX	stalkie_big_nohaplotig	exon	63157457	63157585	100	+	.	Parent=comp162014_c2_seq1.mrna1;Target=comp162014_c2_seq1 1 129 +
ChrX	stalkie_big_nohaplotig	exon	63157657	63157882	100	+	.	Parent=comp162014_c2_seq1.mrna1;Target=comp162014_c2_seq1 130 355 +
ChrX	stalkie_big_nohaplotig	exon	63157945	63158122	100	+	.	Parent=comp162014_c2_seq1.mrna1;Target=comp162014_c2_seq1 356 533 +
ChrX	stalkie_big_nohaplotig	exon	63160454	63160783	100	+	.	Parent=comp162014_c2_seq1.mrna1;Target=comp162014_c2_seq1 534 863 +
ChrX	stalkie_big_nohaplotig	exon	63166107	63166737	100	+	.	Parent=comp162014_c2_seq1.mrna1;Target=comp162014_c2_seq1 864 1494 +
ChrX	stalkie_big_nohaplotig	exon	63167428	63168293	100	+	.	Parent=comp162014_c2_seq1.mrna1;Target=comp162014_c2_seq1 1495 2360 +
ChrX	stalkie_big_nohaplotig	exon	63168490	63168614	100	+	.	Parent=comp162014_c2_seq1.mrna1;Target=comp162014_c2_seq1 2361 2485 +
ChrX	stalkie_big_nohaplotig	exon	63168929	63169348	100	+	.	Parent=comp162014_c2_seq1.mrna1;Target=comp162014_c2_seq1 2486 2905 +
ChrX	stalkie_big_nohaplotig	exon	63170863	63171072	100	+	.	Parent=comp162014_c2_seq1.mrna1;Target=comp162014_c2_seq1 2906 3115 +
ChrX	stalkie_big_nohaplotig	exon	63171137	63171263	100	+	.	Parent=comp162014_c2_seq1.mrna1;Target=comp162014_c2_seq1 3116 3242 +
ChrX	stalkie_big_nohaplotig	exon	63172677	63173221	100	+	.	Parent=comp162014_c2_seq1.mrna1;Target=comp162014_c2_seq1 3243 3787 +
ChrX	stalkie_big_nohaplotig	CDS	63157459	63157585	.	+	0	Parent=comp162014_c2_seq1.mrna1;Target=comp162014_c2_seq1 3 129 +
ChrX	stalkie_big_nohaplotig	CDS	63157657	63157882	.	+	2	Parent=comp162014_c2_seq1.mrna1;Target=comp162014_c2_seq1 130 355 +
ChrX	stalkie_big_nohaplotig	CDS	63157945	63158122	.	+	1	Parent=comp162014_c2_seq1.mrna1;Target=comp162014_c2_seq1 356 533 +
ChrX	stalkie_big_nohaplotig	CDS	63160454	63160783	.	+	0	Parent=comp162014_c2_seq1.mrna1;Target=comp162014_c2_seq1 534 863 +
ChrX	stalkie_big_nohaplotig	CDS	63166107	63166737	.	+	0	Parent=comp162014_c2_seq1.mrna1;Target=comp162014_c2_seq1 864 1494 +
ChrX	stalkie_big_nohaplotig	CDS	63167428	63168293	.	+	2	Parent=comp162014_c2_seq1.mrna1;Target=comp162014_c2_seq1 1495 2360 +
ChrX	stalkie_big_nohaplotig	CDS	63168490	63168614	.	+	0	Parent=comp162014_c2_seq1.mrna1;Target=comp162014_c2_seq1 2361 2485 +
ChrX	stalkie_big_nohaplotig	CDS	63168929	63169348	.	+	1	Parent=comp162014_c2_seq1.mrna1;Target=comp162014_c2_seq1 2486 2905 +
ChrX	stalkie_big_nohaplotig	CDS	63170863	63171072	.	+	1	Parent=comp162014_c2_seq1.mrna1;Target=comp162014_c2_seq1 2906 3115 +
ChrX	stalkie_big_nohaplotig	CDS	63171137	63171263	.	+	1	Parent=comp162014_c2_seq1.mrna1;Target=comp162014_c2_seq1 3116 3242 +
ChrX	stalkie_big_nohaplotig	CDS	63172677	63172883	.	+	0	Parent=comp162014_c2_seq1.mrna1;Target=comp162014_c2_seq1 3243 3449 +
ChrX	gffcl	locus	63156392	63157066	.	+	.	ID=RLOC_00003643;geneIDs=comp134674_c0_seq1.path2;transcripts=comp134674_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	63156392	63157066	.	+	.	ID=comp134674_c0_seq1.mrna2;geneID=comp134674_c0_seq1.path2;Name=comp134674_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=675;mismatches=0;indels=0;unknowns=0;Target=comp134674_c0_seq1 675 1 .;CDS_Target=comp134674_c0_seq1 450 313 .;locus=RLOC_00003643
ChrX	stalkie_big_nohaplotig	exon	63156392	63157066	100	+	.	Parent=comp134674_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	63156704	63156841	.	+	0	Parent=comp134674_c0_seq1.mrna2
ChrX	gffcl	locus	63160928	63161271	.	+	.	ID=RLOC_00003644;geneIDs=comp105904_c0_seq1.path1;transcripts=comp105904_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63160928	63161271	.	+	.	ID=comp105904_c0_seq1.mrna1;geneID=comp105904_c0_seq1.path1;Name=comp105904_c0_seq1;Dir=indeterminatecoverage=97.7;identity=100.0;matches=344;mismatches=0;indels=0;unknowns=0;Target=comp105904_c0_seq1 344 1 .;CDS_Target=comp105904_c0_seq1 196 149 .;locus=RLOC_00003644
ChrX	stalkie_big_nohaplotig	exon	63160928	63161271	100	+	.	Parent=comp105904_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	63161076	63161123	.	+	0	Parent=comp105904_c0_seq1.mrna1
ChrX	gffcl	locus	63161458	63161947	.	+	.	ID=RLOC_00003645;geneIDs=comp146380_c0_seq1.path1;transcripts=comp146380_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63161458	63161947	.	+	.	ID=comp146380_c0_seq1.mrna1;geneID=comp146380_c0_seq1.path1;Name=comp146380_c0_seq1;Dir=indeterminatecoverage=95.9;identity=100.0;matches=490;mismatches=0;indels=0;unknowns=0;Target=comp146380_c0_seq1 511 22 .;CDS_Target=comp146380_c0_seq1 467 378 .;locus=RLOC_00003645
ChrX	stalkie_big_nohaplotig	exon	63161458	63161947	100	+	.	Parent=comp146380_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	63161814	63161903	.	+	0	Parent=comp146380_c0_seq1.mrna1
ChrX	gffcl	locus	63175733	63178476	.	+	.	ID=RLOC_00003646;geneIDs=comp154818_c1_seq1.path1;transcripts=comp154818_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63175733	63178476	.	+	.	ID=comp154818_c1_seq1.mrna1;geneID=comp154818_c1_seq1.path1;Name=comp154818_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2346;mismatches=0;indels=0;unknowns=0;Target=comp154818_c1_seq1 685 506 .;locus=RLOC_00003646
ChrX	stalkie_big_nohaplotig	exon	63175733	63176940	100	+	.	Parent=comp154818_c1_seq1.mrna1;Target=comp154818_c1_seq1 1208 1 .
ChrX	stalkie_big_nohaplotig	exon	63177339	63178476	100	+	.	Parent=comp154818_c1_seq1.mrna1;Target=comp154818_c1_seq1 2346 1209 .
ChrX	stalkie_big_nohaplotig	CDS	63176238	63176417	.	+	0	Parent=comp154818_c1_seq1.mrna1
ChrX	gffcl	locus	63182917	63184608	.	+	.	ID=RLOC_00003647;geneIDs=FBgn0039070.1.path1;transcripts=FBgn0039070.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63182917	63184608	.	+	.	ID=FBgn0039070.1.mrna1;geneID=FBgn0039070.1.path1;Name=FBgn0039070.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1692;mismatches=0;indels=0;unknowns=0;Target=FBgn0039070.1 1692 1 .;locus=RLOC_00003647
ChrX	stalkie_big_nohaplotig	exon	63182917	63184608	100	+	.	Parent=FBgn0039070.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	63182917	63184608	.	+	0	Parent=FBgn0039070.1.mrna1
ChrX	gffcl	locus	63187752	63188333	.	-	.	ID=RLOC_00003648;geneIDs=comp113814_c0_seq1.path1;transcripts=comp113814_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63187752	63188333	.	-	.	ID=comp113814_c0_seq1.mrna1;geneID=comp113814_c0_seq1.path1;Name=comp113814_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=582;mismatches=0;indels=0;unknowns=0;Target=comp113814_c0_seq1 582 1 .;CDS_Target=comp113814_c0_seq1 518 210 .;locus=RLOC_00003648
ChrX	stalkie_big_nohaplotig	exon	63187752	63188333	100	-	.	Parent=comp113814_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	63187816	63188124	.	-	0	Parent=comp113814_c0_seq1.mrna1
ChrX	gffcl	locus	63193173	63195256	.	-	.	ID=RLOC_00003649;geneIDs=comp157179_c5_seq1.path1;transcripts=comp157179_c5_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63193173	63195256	.	-	.	ID=comp157179_c5_seq1.mrna1;geneID=comp157179_c5_seq1.path1;Name=comp157179_c5_seq1;Dir=antisensecoverage=95.2;identity=97.7;matches=1307;mismatches=23;indels=8;unknowns=0;locus=RLOC_00003649
ChrX	stalkie_big_nohaplotig	exon	63193173	63193915	99	-	.	Parent=comp157179_c5_seq1.mrna1;Target=comp157179_c5_seq1 1 743 -
ChrX	stalkie_big_nohaplotig	exon	63194052	63194500	97	-	.	Parent=comp157179_c5_seq1.mrna1;Target=comp157179_c5_seq1 744 1192 -
ChrX	stalkie_big_nohaplotig	exon	63195119	63195256	86	-	.	Parent=comp157179_c5_seq1.mrna1;Target=comp157179_c5_seq1 1193 1338 -
ChrX	stalkie_big_nohaplotig	CDS	63193615	63193915	.	-	1	Parent=comp157179_c5_seq1.mrna1;Target=comp157179_c5_seq1 443 743 .
ChrX	stalkie_big_nohaplotig	CDS	63194052	63194308	.	-	0	Parent=comp157179_c5_seq1.mrna1;Target=comp157179_c5_seq1 744 1000 .
ChrX	gffcl	locus	63205044	63210180	.	+	.	ID=RLOC_00003650;geneIDs=ORF182.path1;transcripts=ORF182.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63205044	63210180	.	+	.	ID=ORF182.mrna1;geneID=ORF182.path1;Name=ORF182;Dir=sensecoverage=100.0;identity=100.0;matches=2625;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003650
ChrX	stalkie_big_nohaplotig	exon	63205044	63205264	100	+	.	Parent=ORF182.mrna1;Target=ORF182 1 221 +
ChrX	stalkie_big_nohaplotig	exon	63207156	63207300	100	+	.	Parent=ORF182.mrna1;Target=ORF182 222 366 +
ChrX	stalkie_big_nohaplotig	exon	63207451	63207551	100	+	.	Parent=ORF182.mrna1;Target=ORF182 367 467 +
ChrX	stalkie_big_nohaplotig	exon	63207842	63207974	100	+	.	Parent=ORF182.mrna1;Target=ORF182 468 600 +
ChrX	stalkie_big_nohaplotig	exon	63208156	63210180	100	+	.	Parent=ORF182.mrna1;Target=ORF182 601 2625 +
ChrX	stalkie_big_nohaplotig	CDS	63205044	63205264	.	+	0	Parent=ORF182.mrna1;Target=ORF182 1 221 +
ChrX	stalkie_big_nohaplotig	CDS	63207156	63207300	.	+	1	Parent=ORF182.mrna1;Target=ORF182 222 366 +
ChrX	stalkie_big_nohaplotig	CDS	63207451	63207551	.	+	0	Parent=ORF182.mrna1;Target=ORF182 367 467 +
ChrX	stalkie_big_nohaplotig	CDS	63207842	63207974	.	+	1	Parent=ORF182.mrna1;Target=ORF182 468 600 +
ChrX	stalkie_big_nohaplotig	CDS	63208156	63210180	.	+	0	Parent=ORF182.mrna1;Target=ORF182 601 2625 +
ChrX	gffcl	locus	63218371	63226429	.	-	.	ID=RLOC_00003651;geneIDs=FBgn0262955.1.path1;transcripts=FBgn0262955.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63218371	63226429	.	-	.	ID=FBgn0262955.1.mrna1;geneID=FBgn0262955.1.path1;Name=FBgn0262955.1;Dir=sensecoverage=100.0;identity=100.0;matches=3545;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003651
ChrX	stalkie_big_nohaplotig	exon	63218371	63218769	100	-	.	Parent=FBgn0262955.1.mrna1;Target=FBgn0262955.1 3148 3546 +
ChrX	stalkie_big_nohaplotig	exon	63218824	63218984	100	-	.	Parent=FBgn0262955.1.mrna1;Target=FBgn0262955.1 2987 3147 +
ChrX	stalkie_big_nohaplotig	exon	63219038	63219359	99	-	.	Parent=FBgn0262955.1.mrna1;Target=FBgn0262955.1 2665 2986 +
ChrX	stalkie_big_nohaplotig	exon	63219415	63220650	100	-	.	Parent=FBgn0262955.1.mrna1;Target=FBgn0262955.1 1429 2664 +
ChrX	stalkie_big_nohaplotig	exon	63220749	63220987	100	-	.	Parent=FBgn0262955.1.mrna1;Target=FBgn0262955.1 1190 1428 +
ChrX	stalkie_big_nohaplotig	exon	63221050	63221971	100	-	.	Parent=FBgn0262955.1.mrna1;Target=FBgn0262955.1 268 1189 +
ChrX	stalkie_big_nohaplotig	exon	63223151	63223377	100	-	.	Parent=FBgn0262955.1.mrna1;Target=FBgn0262955.1 41 267 +
ChrX	stalkie_big_nohaplotig	exon	63226390	63226429	100	-	.	Parent=FBgn0262955.1.mrna1;Target=FBgn0262955.1 1 40 +
ChrX	stalkie_big_nohaplotig	CDS	63218371	63218769	.	-	0	Parent=FBgn0262955.1.mrna1;Target=FBgn0262955.1 3148 3546 +
ChrX	stalkie_big_nohaplotig	CDS	63218824	63218984	.	-	2	Parent=FBgn0262955.1.mrna1;Target=FBgn0262955.1 2987 3147 +
ChrX	stalkie_big_nohaplotig	CDS	63219038	63219359	.	-	0	Parent=FBgn0262955.1.mrna1;Target=FBgn0262955.1 2665 2986 +
ChrX	stalkie_big_nohaplotig	CDS	63219415	63220650	.	-	0	Parent=FBgn0262955.1.mrna1;Target=FBgn0262955.1 1429 2664 +
ChrX	stalkie_big_nohaplotig	CDS	63220749	63220987	.	-	2	Parent=FBgn0262955.1.mrna1;Target=FBgn0262955.1 1190 1428 +
ChrX	stalkie_big_nohaplotig	CDS	63221050	63221971	.	-	0	Parent=FBgn0262955.1.mrna1;Target=FBgn0262955.1 268 1189 +
ChrX	stalkie_big_nohaplotig	CDS	63223151	63223377	.	-	2	Parent=FBgn0262955.1.mrna1;Target=FBgn0262955.1 41 267 +
ChrX	stalkie_big_nohaplotig	CDS	63226390	63226429	.	-	0	Parent=FBgn0262955.1.mrna1;Target=FBgn0262955.1 1 40 +
ChrX	gffcl	locus	63228678	63229784	.	-	.	ID=RLOC_00003652;geneIDs=ORF1428.path1;transcripts=ORF1428.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63228678	63229784	.	-	.	ID=ORF1428.mrna1;geneID=ORF1428.path1;Name=ORF1428;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1106;mismatches=1;indels=0;unknowns=0;Target=ORF1428 1107 1 .;locus=RLOC_00003652
ChrX	stalkie_big_nohaplotig	exon	63228678	63229784	99	-	.	Parent=ORF1428.mrna1
ChrX	stalkie_big_nohaplotig	CDS	63228678	63229784	.	-	0	Parent=ORF1428.mrna1
ChrX	gffcl	locus	63248344	63249144	.	+	.	ID=RLOC_00003653;geneIDs=comp158664_c0_seq1.path1;transcripts=comp158664_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63248344	63249144	.	+	.	ID=comp158664_c0_seq1.mrna1;geneID=comp158664_c0_seq1.path1;Name=comp158664_c0_seq1;Dir=antisensecoverage=99.9;identity=99.6;matches=739;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003653
ChrX	stalkie_big_nohaplotig	exon	63248344	63248543	100	+	.	Parent=comp158664_c0_seq1.mrna1;Target=comp158664_c0_seq1 543 742 -
ChrX	stalkie_big_nohaplotig	exon	63248603	63249144	99	+	.	Parent=comp158664_c0_seq1.mrna1;Target=comp158664_c0_seq1 1 542 -
ChrX	stalkie_big_nohaplotig	CDS	63248420	63248543	.	+	0	Parent=comp158664_c0_seq1.mrna1;Target=comp158664_c0_seq1 543 666 .
ChrX	stalkie_big_nohaplotig	CDS	63248603	63249102	.	+	2	Parent=comp158664_c0_seq1.mrna1;Target=comp158664_c0_seq1 43 542 .
ChrX	gffcl	locus	63274698	63275101	.	-	.	ID=RLOC_00003656;geneIDs=comp136459_c0_seq1.path1;transcripts=comp136459_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63274698	63275101	.	-	.	ID=comp136459_c0_seq1.mrna1;geneID=comp136459_c0_seq1.path1;Name=comp136459_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=404;mismatches=0;indels=0;unknowns=0;Target=comp136459_c0_seq1 404 1 .;CDS_Target=comp136459_c0_seq1 365 3 .;locus=RLOC_00003656
ChrX	stalkie_big_nohaplotig	exon	63274698	63275101	100	-	.	Parent=comp136459_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	63274737	63275099	.	-	0	Parent=comp136459_c0_seq1.mrna1
ChrX	gffcl	locus	63372919	63375779	.	-	.	ID=RLOC_00003657;geneIDs=ORF258.path1;transcripts=ORF258.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63372919	63375779	.	-	.	ID=ORF258.mrna1;geneID=ORF258.path1;Name=ORF258;Dir=sensecoverage=100.0;identity=100.0;matches=2226;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003657
ChrX	stalkie_big_nohaplotig	exon	63372919	63373109	100	-	.	Parent=ORF258.mrna1;Target=ORF258 2036 2226 +
ChrX	stalkie_big_nohaplotig	exon	63373178	63373960	100	-	.	Parent=ORF258.mrna1;Target=ORF258 1253 2035 +
ChrX	stalkie_big_nohaplotig	exon	63374045	63374167	100	-	.	Parent=ORF258.mrna1;Target=ORF258 1130 1252 +
ChrX	stalkie_big_nohaplotig	exon	63374262	63374630	100	-	.	Parent=ORF258.mrna1;Target=ORF258 761 1129 +
ChrX	stalkie_big_nohaplotig	exon	63374763	63375083	100	-	.	Parent=ORF258.mrna1;Target=ORF258 440 760 +
ChrX	stalkie_big_nohaplotig	exon	63375223	63375408	100	-	.	Parent=ORF258.mrna1;Target=ORF258 254 439 +
ChrX	stalkie_big_nohaplotig	exon	63375527	63375779	100	-	.	Parent=ORF258.mrna1;Target=ORF258 1 253 +
ChrX	stalkie_big_nohaplotig	CDS	63372919	63373109	.	-	2	Parent=ORF258.mrna1;Target=ORF258 2036 2226 +
ChrX	stalkie_big_nohaplotig	CDS	63373178	63373960	.	-	2	Parent=ORF258.mrna1;Target=ORF258 1253 2035 +
ChrX	stalkie_big_nohaplotig	CDS	63374045	63374167	.	-	2	Parent=ORF258.mrna1;Target=ORF258 1130 1252 +
ChrX	stalkie_big_nohaplotig	CDS	63374262	63374630	.	-	2	Parent=ORF258.mrna1;Target=ORF258 761 1129 +
ChrX	stalkie_big_nohaplotig	CDS	63374763	63375083	.	-	2	Parent=ORF258.mrna1;Target=ORF258 440 760 +
ChrX	stalkie_big_nohaplotig	CDS	63375223	63375408	.	-	2	Parent=ORF258.mrna1;Target=ORF258 254 439 +
ChrX	stalkie_big_nohaplotig	CDS	63375527	63375779	.	-	0	Parent=ORF258.mrna1;Target=ORF258 1 253 +
ChrX	gffcl	locus	63383370	63384483	.	-	.	ID=RLOC_00003658;geneIDs=ORF1584.path1;transcripts=ORF1584.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63383370	63384483	.	-	.	ID=ORF1584.mrna1;geneID=ORF1584.path1;Name=ORF1584;Dir=sensecoverage=100.0;identity=99.5;matches=1048;mismatches=5;indels=0;unknowns=0;locus=RLOC_00003658
ChrX	stalkie_big_nohaplotig	exon	63383370	63383795	99	-	.	Parent=ORF1584.mrna1;Target=ORF1584 628 1053 +
ChrX	stalkie_big_nohaplotig	exon	63383857	63384483	99	-	.	Parent=ORF1584.mrna1;Target=ORF1584 1 627 +
ChrX	stalkie_big_nohaplotig	CDS	63383370	63383795	.	-	0	Parent=ORF1584.mrna1;Target=ORF1584 628 1053 +
ChrX	stalkie_big_nohaplotig	CDS	63383857	63384483	.	-	0	Parent=ORF1584.mrna1;Target=ORF1584 1 627 +
ChrX	gffcl	locus	63531366	63532044	.	+	.	ID=RLOC_00003659;geneIDs=comp131773_c0_seq1.path1;transcripts=comp131773_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63531366	63532044	.	+	.	ID=comp131773_c0_seq1.mrna1;geneID=comp131773_c0_seq1.path1;Name=comp131773_c0_seq1;Dir=antisensecoverage=95.1;identity=99.8;matches=624;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003659
ChrX	stalkie_big_nohaplotig	exon	63531366	63531496	100	+	.	Parent=comp131773_c0_seq1.mrna1;Target=comp131773_c0_seq1 514 644 -
ChrX	stalkie_big_nohaplotig	exon	63531551	63532044	99	+	.	Parent=comp131773_c0_seq1.mrna1;Target=comp131773_c0_seq1 20 513 -
ChrX	stalkie_big_nohaplotig	CDS	63531461	63531496	.	+	0	Parent=comp131773_c0_seq1.mrna1;Target=comp131773_c0_seq1 514 549 .
ChrX	stalkie_big_nohaplotig	CDS	63531551	63531844	.	+	0	Parent=comp131773_c0_seq1.mrna1;Target=comp131773_c0_seq1 220 513 .
ChrX	gffcl	locus	63560798	63577395	.	+	.	ID=RLOC_00003660;geneIDs=FBgn0025639.2.path1;transcripts=FBgn0025639.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63560798	63577395	.	+	.	ID=FBgn0025639.2.mrna1;geneID=FBgn0025639.2.path1;Name=FBgn0025639.2;Dir=sensecoverage=100.0;identity=100.0;matches=4770;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003660
ChrX	stalkie_big_nohaplotig	exon	63560798	63561209	100	+	.	Parent=FBgn0025639.2.mrna1;Target=FBgn0025639.2 1 412 +
ChrX	stalkie_big_nohaplotig	exon	63564726	63564845	100	+	.	Parent=FBgn0025639.2.mrna1;Target=FBgn0025639.2 413 532 +
ChrX	stalkie_big_nohaplotig	exon	63564931	63565122	100	+	.	Parent=FBgn0025639.2.mrna1;Target=FBgn0025639.2 533 724 +
ChrX	stalkie_big_nohaplotig	exon	63566893	63567360	100	+	.	Parent=FBgn0025639.2.mrna1;Target=FBgn0025639.2 725 1192 +
ChrX	stalkie_big_nohaplotig	exon	63567445	63568797	100	+	.	Parent=FBgn0025639.2.mrna1;Target=FBgn0025639.2 1193 2545 +
ChrX	stalkie_big_nohaplotig	exon	63568856	63569134	100	+	.	Parent=FBgn0025639.2.mrna1;Target=FBgn0025639.2 2546 2824 +
ChrX	stalkie_big_nohaplotig	exon	63569200	63569378	100	+	.	Parent=FBgn0025639.2.mrna1;Target=FBgn0025639.2 2825 3003 +
ChrX	stalkie_big_nohaplotig	exon	63569447	63569705	100	+	.	Parent=FBgn0025639.2.mrna1;Target=FBgn0025639.2 3004 3262 +
ChrX	stalkie_big_nohaplotig	exon	63571009	63571584	100	+	.	Parent=FBgn0025639.2.mrna1;Target=FBgn0025639.2 3263 3838 +
ChrX	stalkie_big_nohaplotig	exon	63571649	63571724	100	+	.	Parent=FBgn0025639.2.mrna1;Target=FBgn0025639.2 3839 3914 +
ChrX	stalkie_big_nohaplotig	exon	63576540	63577395	100	+	.	Parent=FBgn0025639.2.mrna1;Target=FBgn0025639.2 3915 4770 +
ChrX	stalkie_big_nohaplotig	CDS	63560798	63561209	.	+	0	Parent=FBgn0025639.2.mrna1;Target=FBgn0025639.2 1 412 +
ChrX	stalkie_big_nohaplotig	CDS	63564726	63564845	.	+	2	Parent=FBgn0025639.2.mrna1;Target=FBgn0025639.2 413 532 +
ChrX	stalkie_big_nohaplotig	CDS	63564931	63565122	.	+	2	Parent=FBgn0025639.2.mrna1;Target=FBgn0025639.2 533 724 +
ChrX	stalkie_big_nohaplotig	CDS	63566893	63567360	.	+	2	Parent=FBgn0025639.2.mrna1;Target=FBgn0025639.2 725 1192 +
ChrX	stalkie_big_nohaplotig	CDS	63567445	63568797	.	+	2	Parent=FBgn0025639.2.mrna1;Target=FBgn0025639.2 1193 2545 +
ChrX	stalkie_big_nohaplotig	CDS	63568856	63569134	.	+	2	Parent=FBgn0025639.2.mrna1;Target=FBgn0025639.2 2546 2824 +
ChrX	stalkie_big_nohaplotig	CDS	63569200	63569378	.	+	2	Parent=FBgn0025639.2.mrna1;Target=FBgn0025639.2 2825 3003 +
ChrX	stalkie_big_nohaplotig	CDS	63569447	63569705	.	+	0	Parent=FBgn0025639.2.mrna1;Target=FBgn0025639.2 3004 3262 +
ChrX	stalkie_big_nohaplotig	CDS	63571009	63571584	.	+	2	Parent=FBgn0025639.2.mrna1;Target=FBgn0025639.2 3263 3838 +
ChrX	stalkie_big_nohaplotig	CDS	63571649	63571724	.	+	2	Parent=FBgn0025639.2.mrna1;Target=FBgn0025639.2 3839 3914 +
ChrX	stalkie_big_nohaplotig	CDS	63576540	63577395	.	+	1	Parent=FBgn0025639.2.mrna1;Target=FBgn0025639.2 3915 4770 +
ChrX	gffcl	locus	63578270	63579411	.	-	.	ID=RLOC_00003661;geneIDs=comp153008_c0_seq1.path1;transcripts=comp153008_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63578270	63579411	.	-	.	ID=comp153008_c0_seq1.mrna1;geneID=comp153008_c0_seq1.path1;Name=comp153008_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1133;mismatches=9;indels=1;unknowns=0;Target=comp153008_c0_seq1 1143 1 .;CDS_Target=comp153008_c0_seq1 906 799 .;locus=RLOC_00003661
ChrX	stalkie_big_nohaplotig	exon	63578270	63579411	99	-	.	Parent=comp153008_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	63578507	63578614	.	-	0	Parent=comp153008_c0_seq1.mrna1
ChrX	gffcl	locus	63580538	63581250	.	-	.	ID=RLOC_00003662;geneIDs=comp155698_c0_seq1.path1;transcripts=comp155698_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63580538	63581250	.	-	.	ID=comp155698_c0_seq1.mrna1;geneID=comp155698_c0_seq1.path1;Name=comp155698_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=709;mismatches=4;indels=1;unknowns=0;Target=comp155698_c0_seq1 714 1 .;CDS_Target=comp155698_c0_seq1 714 529 .;locus=RLOC_00003662
ChrX	stalkie_big_nohaplotig	exon	63580538	63581250	99	-	.	Parent=comp155698_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	63580538	63580723	.	-	0	Parent=comp155698_c0_seq1.mrna1
ChrX	gffcl	locus	63585827	63586597	.	-	.	ID=RLOC_00003663;geneIDs=ORF3074.path1;transcripts=ORF3074.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63585827	63586597	.	-	.	ID=ORF3074.mrna1;geneID=ORF3074.path1;Name=ORF3074;Dir=indeterminatecoverage=100.0;identity=100.0;matches=771;mismatches=0;indels=0;unknowns=0;Target=ORF3074 771 1 .;locus=RLOC_00003663
ChrX	stalkie_big_nohaplotig	exon	63585827	63586597	100	-	.	Parent=ORF3074.mrna1
ChrX	stalkie_big_nohaplotig	CDS	63585827	63586597	.	-	0	Parent=ORF3074.mrna1
ChrX	gffcl	locus	63604043	63604828	.	-	.	ID=RLOC_00003665;geneIDs=FBgn0020238.9.path1;transcripts=FBgn0020238.9.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63604043	63604828	.	-	.	ID=FBgn0020238.9.mrna1;geneID=FBgn0020238.9.path1;Name=FBgn0020238.9;Dir=indeterminatecoverage=100.0;identity=100.0;matches=786;mismatches=0;indels=0;unknowns=0;Target=FBgn0020238.9 786 1 .;locus=RLOC_00003665
ChrX	stalkie_big_nohaplotig	exon	63604043	63604828	100	-	.	Parent=FBgn0020238.9.mrna1
ChrX	stalkie_big_nohaplotig	CDS	63604043	63604828	.	-	0	Parent=FBgn0020238.9.mrna1
ChrX	gffcl	locus	63607787	63608681	.	+	.	ID=RLOC_00003666;geneIDs=comp150044_c1_seq1.path1;transcripts=comp150044_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63607787	63608681	.	+	.	ID=comp150044_c1_seq1.mrna1;geneID=comp150044_c1_seq1.path1;Name=comp150044_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=890;mismatches=5;indels=0;unknowns=0;Target=comp150044_c1_seq1 895 1 .;CDS_Target=comp150044_c1_seq1 895 161 .;locus=RLOC_00003666
ChrX	stalkie_big_nohaplotig	exon	63607787	63608681	99	+	.	Parent=comp150044_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	63607947	63608681	.	+	0	Parent=comp150044_c1_seq1.mrna1
ChrX	gffcl	locus	63617546	63618358	.	+	.	ID=RLOC_00003667;geneIDs=FBgn0020238.4.path1;transcripts=FBgn0020238.4.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63617546	63618358	.	+	.	ID=FBgn0020238.4.mrna1;geneID=FBgn0020238.4.path1;Name=FBgn0020238.4;Dir=indeterminatecoverage=100.0;identity=100.0;matches=813;mismatches=0;indels=0;unknowns=0;Target=FBgn0020238.4 813 1 .;locus=RLOC_00003667
ChrX	stalkie_big_nohaplotig	exon	63617546	63618358	100	+	.	Parent=FBgn0020238.4.mrna1
ChrX	stalkie_big_nohaplotig	CDS	63617546	63618358	.	+	0	Parent=FBgn0020238.4.mrna1
ChrX	gffcl	locus	63620873	63621700	.	-	.	ID=RLOC_00003668;geneIDs=FBgn0004907.1.path1;transcripts=FBgn0004907.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63620873	63621700	.	-	.	ID=FBgn0004907.1.mrna1;geneID=FBgn0004907.1.path1;Name=FBgn0004907.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=828;mismatches=0;indels=0;unknowns=0;Target=FBgn0004907.1 828 1 .;locus=RLOC_00003668
ChrX	stalkie_big_nohaplotig	exon	63620873	63621700	100	-	.	Parent=FBgn0004907.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	63620873	63621700	.	-	0	Parent=FBgn0004907.1.mrna1
ChrX	gffcl	locus	63674538	63677773	.	+	.	ID=RLOC_00003669;geneIDs=comp140113_c0_seq1.path1;transcripts=comp140113_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63674538	63677773	.	+	.	ID=comp140113_c0_seq1.mrna1;geneID=comp140113_c0_seq1.path1;Name=comp140113_c0_seq1;Dir=antisensecoverage=97.0;identity=100.0;matches=555;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003669
ChrX	stalkie_big_nohaplotig	exon	63674538	63674765	100	+	.	Parent=comp140113_c0_seq1.mrna1;Target=comp140113_c0_seq1 328 555 -
ChrX	stalkie_big_nohaplotig	exon	63674821	63674916	100	+	.	Parent=comp140113_c0_seq1.mrna1;Target=comp140113_c0_seq1 232 327 -
ChrX	stalkie_big_nohaplotig	exon	63677543	63677773	100	+	.	Parent=comp140113_c0_seq1.mrna1;Target=comp140113_c0_seq1 1 231 -
ChrX	stalkie_big_nohaplotig	CDS	63674821	63674916	.	+	0	Parent=comp140113_c0_seq1.mrna1;Target=comp140113_c0_seq1 232 327 .
ChrX	stalkie_big_nohaplotig	CDS	63677543	63677620	.	+	0	Parent=comp140113_c0_seq1.mrna1;Target=comp140113_c0_seq1 154 231 .
ChrX	gffcl	locus	63725558	63726043	.	+	.	ID=RLOC_00003670;geneIDs=FBgn0039678.1.path1;transcripts=FBgn0039678.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63725558	63726043	.	+	.	ID=FBgn0039678.1.mrna1;geneID=FBgn0039678.1.path1;Name=FBgn0039678.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=486;mismatches=0;indels=0;unknowns=0;Target=FBgn0039678.1 486 1 .;locus=RLOC_00003670
ChrX	stalkie_big_nohaplotig	exon	63725558	63726043	100	+	.	Parent=FBgn0039678.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	63725558	63726043	.	+	0	Parent=FBgn0039678.1.mrna1
ChrX	gffcl	locus	63730012	63730797	.	+	.	ID=RLOC_00003671;geneIDs=ORF2936.path1;transcripts=ORF2936.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63730012	63730797	.	+	.	ID=ORF2936.mrna1;geneID=ORF2936.path1;Name=ORF2936;Dir=indeterminatecoverage=100.0;identity=100.0;matches=786;mismatches=0;indels=0;unknowns=0;Target=ORF2936 786 1 .;locus=RLOC_00003671
ChrX	stalkie_big_nohaplotig	exon	63730012	63730797	100	+	.	Parent=ORF2936.mrna1
ChrX	stalkie_big_nohaplotig	CDS	63730012	63730797	.	+	0	Parent=ORF2936.mrna1
ChrX	gffcl	locus	63807613	63808364	.	-	.	ID=RLOC_00003672;geneIDs=comp152867_c0_seq1.path1;transcripts=comp152867_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63807613	63808364	.	-	.	ID=comp152867_c0_seq1.mrna1;geneID=comp152867_c0_seq1.path1;Name=comp152867_c0_seq1;Dir=sensecoverage=100.0;identity=93.8;matches=690;mismatches=5;indels=41;unknowns=0;locus=RLOC_00003672
ChrX	stalkie_big_nohaplotig	exon	63807613	63808113	91	-	.	Parent=comp152867_c0_seq1.mrna1;Target=comp152867_c0_seq1 195 736 +
ChrX	stalkie_big_nohaplotig	exon	63808171	63808364	99	-	.	Parent=comp152867_c0_seq1.mrna1;Target=comp152867_c0_seq1 1 194 +
ChrX	stalkie_big_nohaplotig	CDS	63807700	63808113	.	-	2	Parent=comp152867_c0_seq1.mrna1;Target=comp152867_c0_seq1 195 619 +
ChrX	stalkie_big_nohaplotig	CDS	63808171	63808294	.	-	0	Parent=comp152867_c0_seq1.mrna1;Target=comp152867_c0_seq1 71 194 +
ChrX	gffcl	locus	63816322	63817529	.	-	.	ID=RLOC_00003673;geneIDs=comp151565_c0_seq1.path1;transcripts=comp151565_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63816322	63817529	.	-	.	ID=comp151565_c0_seq1.mrna1;geneID=comp151565_c0_seq1.path1;Name=comp151565_c0_seq1;Dir=antisensecoverage=99.9;identity=98.9;matches=1100;mismatches=1;indels=11;unknowns=0;locus=RLOC_00003673
ChrX	stalkie_big_nohaplotig	exon	63816322	63816530	100	-	.	Parent=comp151565_c0_seq1.mrna1;Target=comp151565_c0_seq1 2 210 -
ChrX	stalkie_big_nohaplotig	exon	63816576	63817054	100	-	.	Parent=comp151565_c0_seq1.mrna1;Target=comp151565_c0_seq1 211 689 -
ChrX	stalkie_big_nohaplotig	exon	63817115	63817529	97	-	.	Parent=comp151565_c0_seq1.mrna1;Target=comp151565_c0_seq1 690 1111 -
ChrX	stalkie_big_nohaplotig	CDS	63816462	63816530	.	-	0	Parent=comp151565_c0_seq1.mrna1;Target=comp151565_c0_seq1 142 210 .
ChrX	stalkie_big_nohaplotig	CDS	63816576	63817054	.	-	2	Parent=comp151565_c0_seq1.mrna1;Target=comp151565_c0_seq1 211 689 .
ChrX	stalkie_big_nohaplotig	CDS	63817115	63817238	.	-	0	Parent=comp151565_c0_seq1.mrna1;Target=comp151565_c0_seq1 690 813 .
ChrX	gffcl	locus	63826640	63828153	.	+	.	ID=RLOC_00003674;geneIDs=comp160884_c1_seq1.path1;transcripts=comp160884_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63826640	63828153	.	+	.	ID=comp160884_c1_seq1.mrna1;geneID=comp160884_c1_seq1.path1;Name=comp160884_c1_seq1;Dir=sensecoverage=99.9;identity=91.6;matches=1364;mismatches=69;indels=56;unknowns=0;Target=comp160884_c1_seq1 476 667 +;locus=RLOC_00003674
ChrX	stalkie_big_nohaplotig	exon	63826640	63827348	89	+	.	Parent=comp160884_c1_seq1.mrna1;Target=comp160884_c1_seq1 1 735 +
ChrX	stalkie_big_nohaplotig	exon	63827410	63828153	93	+	.	Parent=comp160884_c1_seq1.mrna1;Target=comp160884_c1_seq1 736 1469 +
ChrX	stalkie_big_nohaplotig	CDS	63827089	63827280	.	+	0	Parent=comp160884_c1_seq1.mrna1
ChrX	gffcl	locus	63829216	63829992	.	-	.	ID=RLOC_00003675;geneIDs=ORF3023.path1;transcripts=ORF3023.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63829216	63829992	.	-	.	ID=ORF3023.mrna1;geneID=ORF3023.path1;Name=ORF3023;Dir=indeterminatecoverage=100.0;identity=100.0;matches=777;mismatches=0;indels=0;unknowns=0;Target=ORF3023 777 1 .;locus=RLOC_00003675
ChrX	stalkie_big_nohaplotig	exon	63829216	63829992	100	-	.	Parent=ORF3023.mrna1
ChrX	stalkie_big_nohaplotig	CDS	63829216	63829992	.	-	0	Parent=ORF3023.mrna1
ChrX	gffcl	locus	63831754	63836547	.	-	.	ID=RLOC_00003676;geneIDs=comp154667_c0_seq1.path1;transcripts=comp154667_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63831754	63836547	.	-	.	ID=comp154667_c0_seq1.mrna1;geneID=comp154667_c0_seq1.path1;Name=comp154667_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=1010;mismatches=3;indels=1;unknowns=0;locus=RLOC_00003676
ChrX	stalkie_big_nohaplotig	exon	63831754	63832317	99	-	.	Parent=comp154667_c0_seq1.mrna1;Target=comp154667_c0_seq1 1 565 -
ChrX	stalkie_big_nohaplotig	exon	63834657	63834915	100	-	.	Parent=comp154667_c0_seq1.mrna1;Target=comp154667_c0_seq1 566 824 -
ChrX	stalkie_big_nohaplotig	exon	63836358	63836547	100	-	.	Parent=comp154667_c0_seq1.mrna1;Target=comp154667_c0_seq1 825 1014 -
ChrX	stalkie_big_nohaplotig	CDS	63832261	63832317	.	-	0	Parent=comp154667_c0_seq1.mrna1;Target=comp154667_c0_seq1 509 565 .
ChrX	stalkie_big_nohaplotig	CDS	63834657	63834731	.	-	0	Parent=comp154667_c0_seq1.mrna1;Target=comp154667_c0_seq1 566 640 .
ChrX	gffcl	locus	63836565	63850544	.	+	.	ID=RLOC_00003677;geneIDs=comp87806_c0_seq1.path1;transcripts=comp87806_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63836565	63850544	.	+	.	ID=comp87806_c0_seq1.mrna1;geneID=comp87806_c0_seq1.path1;Name=comp87806_c0_seq1;Dir=indeterminatecoverage=67.3;identity=100.0;matches=1040;mismatches=0;indels=0;unknowns=48;Target=comp87806_c0_seq1 1460 693 .;locus=RLOC_00003677
ChrX	stalkie_big_nohaplotig	exon	63836565	63836567	100	+	.	Parent=comp87806_c0_seq1.mrna1;Target=comp87806_c0_seq1 531 529 .
ChrX	stalkie_big_nohaplotig	exon	63839820	63839822	100	+	.	Parent=comp87806_c0_seq1.mrna1;Target=comp87806_c0_seq1 534 532 .
ChrX	stalkie_big_nohaplotig	exon	63844684	63845716	100	+	.	Parent=comp87806_c0_seq1.mrna1;Target=comp87806_c0_seq1 1567 535 .
ChrX	stalkie_big_nohaplotig	exon	63850496	63850544	100	+	.	Parent=comp87806_c0_seq1.mrna1;Target=comp87806_c0_seq1 1616 1568 .
ChrX	stalkie_big_nohaplotig	CDS	63844842	63845609	.	+	0	Parent=comp87806_c0_seq1.mrna1
ChrX	gffcl	locus	63848591	64153788	.	+	.	ID=RLOC_00003678;geneIDs=ORF131.path1;transcripts=ORF131.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63848591	64153788	.	+	.	ID=ORF131.mrna1;geneID=ORF131.path1;Name=ORF131;Dir=sensecoverage=74.4;identity=95.2;matches=1919;mismatches=43;indels=54;unknowns=0;locus=RLOC_00003678
ChrX	stalkie_big_nohaplotig	exon	63848591	63849731	98	+	.	Parent=ORF131.mrna1;Target=ORF131 1 1141 +
ChrX	stalkie_big_nohaplotig	exon	63849795	63849878	100	+	.	Parent=ORF131.mrna1;Target=ORF131 1142 1225 +
ChrX	stalkie_big_nohaplotig	exon	63849954	63850418	99	+	.	Parent=ORF131.mrna1;Target=ORF131 1226 1690 +
ChrX	stalkie_big_nohaplotig	exon	63868037	63868054	72	+	.	Parent=ORF131.mrna1;Target=ORF131 1691 1703 +
ChrX	stalkie_big_nohaplotig	exon	63895060	63895070	81	+	.	Parent=ORF131.mrna1;Target=ORF131 1704 1714 +
ChrX	stalkie_big_nohaplotig	exon	63910627	63910640	78	+	.	Parent=ORF131.mrna1;Target=ORF131 1715 1725 +
ChrX	stalkie_big_nohaplotig	exon	63917555	63917594	63	+	.	Parent=ORF131.mrna1;Target=ORF131 1726 1760 +
ChrX	stalkie_big_nohaplotig	exon	63920135	63920146	85	+	.	Parent=ORF131.mrna1;Target=ORF131 1761 1774 +
ChrX	stalkie_big_nohaplotig	exon	63922861	63922863	100	+	.	Parent=ORF131.mrna1;Target=ORF131 1775 1777 +
ChrX	stalkie_big_nohaplotig	exon	63929916	63929926	100	+	.	Parent=ORF131.mrna1;Target=ORF131 1778 1788 +
ChrX	stalkie_big_nohaplotig	exon	63945818	63945835	58	+	.	Parent=ORF131.mrna1;Target=ORF131 1793 1816 +
ChrX	stalkie_big_nohaplotig	exon	63955159	63955169	90	+	.	Parent=ORF131.mrna1;Target=ORF131 1856 1866 +
ChrX	stalkie_big_nohaplotig	exon	63991628	63991634	100	+	.	Parent=ORF131.mrna1;Target=ORF131 1873 1879 +
ChrX	stalkie_big_nohaplotig	exon	64001961	64001970	90	+	.	Parent=ORF131.mrna1;Target=ORF131 1880 1889 +
ChrX	stalkie_big_nohaplotig	exon	64028141	64028150	90	+	.	Parent=ORF131.mrna1;Target=ORF131 1890 1899 +
ChrX	stalkie_big_nohaplotig	exon	64060284	64060290	100	+	.	Parent=ORF131.mrna1;Target=ORF131 1900 1906 +
ChrX	stalkie_big_nohaplotig	exon	64069093	64069098	100	+	.	Parent=ORF131.mrna1;Target=ORF131 1911 1916 +
ChrX	stalkie_big_nohaplotig	exon	64070002	64070013	91	+	.	Parent=ORF131.mrna1;Target=ORF131 1938 1949 +
ChrX	stalkie_big_nohaplotig	exon	64071621	64071622	100	+	.	Parent=ORF131.mrna1;Target=ORF131 1950 1951 +
ChrX	stalkie_big_nohaplotig	exon	64071627	64071628	100	+	.	Parent=ORF131.mrna1;Target=ORF131 1978 1979 +
ChrX	stalkie_big_nohaplotig	exon	64075945	64075953	100	+	.	Parent=ORF131.mrna1;Target=ORF131 1980 1988 +
ChrX	stalkie_big_nohaplotig	exon	64095878	64095891	33	+	.	Parent=ORF131.mrna1;Target=ORF131 2011 2037 +
ChrX	stalkie_big_nohaplotig	exon	64105215	64105221	100	+	.	Parent=ORF131.mrna1;Target=ORF131 2038 2044 +
ChrX	stalkie_big_nohaplotig	exon	64111168	64111179	100	+	.	Parent=ORF131.mrna1;Target=ORF131 2048 2059 +
ChrX	stalkie_big_nohaplotig	exon	64126337	64126339	100	+	.	Parent=ORF131.mrna1;Target=ORF131 2060 2062 +
ChrX	stalkie_big_nohaplotig	exon	64128709	64128710	50	+	.	Parent=ORF131.mrna1;Target=ORF131 2063 2064 +
ChrX	stalkie_big_nohaplotig	exon	64138833	64138846	85	+	.	Parent=ORF131.mrna1;Target=ORF131 2065 2078 +
ChrX	stalkie_big_nohaplotig	exon	64150060	64150069	80	+	.	Parent=ORF131.mrna1;Target=ORF131 2079 2088 +
ChrX	stalkie_big_nohaplotig	exon	64153771	64153788	47	+	.	Parent=ORF131.mrna1;Target=ORF131 2089 2124 +
ChrX	stalkie_big_nohaplotig	CDS	63848591	63849731	.	+	0	Parent=ORF131.mrna1;Target=ORF131 1 1141 +
ChrX	stalkie_big_nohaplotig	CDS	63849795	63849878	.	+	2	Parent=ORF131.mrna1;Target=ORF131 1142 1225 +
ChrX	stalkie_big_nohaplotig	CDS	63849954	63850418	.	+	2	Parent=ORF131.mrna1;Target=ORF131 1226 1690 +
ChrX	stalkie_big_nohaplotig	CDS	63868037	63868054	.	+	2	Parent=ORF131.mrna1;Target=ORF131 1691 1703 +
ChrX	stalkie_big_nohaplotig	CDS	63895060	63895070	.	+	2	Parent=ORF131.mrna1;Target=ORF131 1704 1714 +
ChrX	stalkie_big_nohaplotig	CDS	63910627	63910640	.	+	0	Parent=ORF131.mrna1;Target=ORF131 1715 1725 +
ChrX	stalkie_big_nohaplotig	CDS	63917555	63917594	.	+	1	Parent=ORF131.mrna1;Target=ORF131 1726 1760 +
ChrX	stalkie_big_nohaplotig	CDS	63920135	63920146	.	+	0	Parent=ORF131.mrna1;Target=ORF131 1761 1774 +
ChrX	stalkie_big_nohaplotig	CDS	63922861	63922863	.	+	0	Parent=ORF131.mrna1;Target=ORF131 1775 1777 +
ChrX	stalkie_big_nohaplotig	CDS	63929916	63929926	.	+	0	Parent=ORF131.mrna1;Target=ORF131 1778 1788 +
ChrX	stalkie_big_nohaplotig	CDS	63945818	63945835	.	+	1	Parent=ORF131.mrna1;Target=ORF131 1793 1816 +
ChrX	stalkie_big_nohaplotig	CDS	63955159	63955169	.	+	1	Parent=ORF131.mrna1;Target=ORF131 1856 1866 +
ChrX	stalkie_big_nohaplotig	CDS	63991628	63991634	.	+	2	Parent=ORF131.mrna1;Target=ORF131 1873 1879 +
ChrX	stalkie_big_nohaplotig	CDS	64001961	64001970	.	+	1	Parent=ORF131.mrna1;Target=ORF131 1880 1889 +
ChrX	stalkie_big_nohaplotig	CDS	64028141	64028150	.	+	0	Parent=ORF131.mrna1;Target=ORF131 1890 1899 +
ChrX	stalkie_big_nohaplotig	CDS	64060284	64060290	.	+	2	Parent=ORF131.mrna1;Target=ORF131 1900 1906 +
ChrX	stalkie_big_nohaplotig	CDS	64069093	64069098	.	+	1	Parent=ORF131.mrna1;Target=ORF131 1911 1916 +
ChrX	stalkie_big_nohaplotig	CDS	64070002	64070013	.	+	1	Parent=ORF131.mrna1;Target=ORF131 1938 1949 +
ChrX	stalkie_big_nohaplotig	CDS	64071621	64071622	.	+	1	Parent=ORF131.mrna1;Target=ORF131 1950 1951 +
ChrX	stalkie_big_nohaplotig	CDS	64071627	64071628	.	+	2	Parent=ORF131.mrna1;Target=ORF131 1978 1979 +
ChrX	stalkie_big_nohaplotig	CDS	64075945	64075953	.	+	0	Parent=ORF131.mrna1;Target=ORF131 1980 1988 +
ChrX	stalkie_big_nohaplotig	CDS	64095878	64095891	.	+	0	Parent=ORF131.mrna1;Target=ORF131 2011 2037 +
ChrX	stalkie_big_nohaplotig	CDS	64105215	64105221	.	+	1	Parent=ORF131.mrna1;Target=ORF131 2038 2044 +
ChrX	stalkie_big_nohaplotig	CDS	64111168	64111179	.	+	0	Parent=ORF131.mrna1;Target=ORF131 2048 2059 +
ChrX	stalkie_big_nohaplotig	CDS	64126337	64126339	.	+	0	Parent=ORF131.mrna1;Target=ORF131 2060 2062 +
ChrX	stalkie_big_nohaplotig	CDS	64128709	64128710	.	+	0	Parent=ORF131.mrna1;Target=ORF131 2063 2064 +
ChrX	stalkie_big_nohaplotig	CDS	64138833	64138846	.	+	1	Parent=ORF131.mrna1;Target=ORF131 2065 2078 +
ChrX	stalkie_big_nohaplotig	CDS	64150060	64150069	.	+	2	Parent=ORF131.mrna1;Target=ORF131 2079 2088 +
ChrX	stalkie_big_nohaplotig	CDS	64153771	64153788	.	+	1	Parent=ORF131.mrna1;Target=ORF131 2089 2124 +
ChrX	gffcl	locus	63893371	63894201	.	-	.	ID=RLOC_00003679;geneIDs=ORF2627.path1;transcripts=ORF2627.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	63893371	63894201	.	-	.	ID=ORF2627.mrna1;geneID=ORF2627.path1;Name=ORF2627;Dir=indeterminatecoverage=100.0;identity=100.0;matches=831;mismatches=0;indels=0;unknowns=0;Target=ORF2627 831 1 .;locus=RLOC_00003679
ChrX	stalkie_big_nohaplotig	exon	63893371	63894201	100	-	.	Parent=ORF2627.mrna1
ChrX	stalkie_big_nohaplotig	CDS	63893371	63894201	.	-	0	Parent=ORF2627.mrna1
ChrX	gffcl	locus	64026834	64029963	.	-	.	ID=RLOC_00003680;geneIDs=comp136917_c1_seq1.path1;transcripts=comp136917_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64026834	64029963	.	-	.	ID=comp136917_c1_seq1.mrna1;geneID=comp136917_c1_seq1.path1;Name=comp136917_c1_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=1565;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003680
ChrX	stalkie_big_nohaplotig	exon	64026834	64027429	100	-	.	Parent=comp136917_c1_seq1.mrna1;Target=comp136917_c1_seq1 970 1565 +
ChrX	stalkie_big_nohaplotig	exon	64028120	64028966	100	-	.	Parent=comp136917_c1_seq1.mrna1;Target=comp136917_c1_seq1 123 969 +
ChrX	stalkie_big_nohaplotig	exon	64029842	64029963	100	-	.	Parent=comp136917_c1_seq1.mrna1;Target=comp136917_c1_seq1 1 122 +
ChrX	stalkie_big_nohaplotig	CDS	64027317	64027429	.	-	2	Parent=comp136917_c1_seq1.mrna1;Target=comp136917_c1_seq1 970 1082 +
ChrX	stalkie_big_nohaplotig	CDS	64028120	64028207	.	-	0	Parent=comp136917_c1_seq1.mrna1;Target=comp136917_c1_seq1 882 969 +
ChrX	gffcl	locus	64047140	64048143	.	-	.	ID=RLOC_00003681;geneIDs=comp155383_c1_seq1.path1;transcripts=comp155383_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64047140	64048143	.	-	.	ID=comp155383_c1_seq1.mrna1;geneID=comp155383_c1_seq1.path1;Name=comp155383_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1003;mismatches=1;indels=0;unknowns=0;Target=comp155383_c1_seq1 1004 1 .;CDS_Target=comp155383_c1_seq1 337 68 .;locus=RLOC_00003681
ChrX	stalkie_big_nohaplotig	exon	64047140	64048143	99	-	.	Parent=comp155383_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	64047807	64048076	.	-	0	Parent=comp155383_c1_seq1.mrna1
ChrX	gffcl	locus	64118634	65587164	.	+	.	ID=RLOC_00003682;geneIDs=comp159734_c0_seq1.path1;transcripts=comp159734_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64118634	65587164	.	+	.	ID=comp159734_c0_seq1.mrna1;geneID=comp159734_c0_seq1.path1;Name=comp159734_c0_seq1;Dir=indeterminatecoverage=81.4;identity=92.4;matches=1377;mismatches=63;indels=51;unknowns=0;Target=comp159734_c0_seq1 710 477 .;locus=RLOC_00003682
ChrX	stalkie_big_nohaplotig	exon	64118634	64119715	99	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1087 5 .
ChrX	stalkie_big_nohaplotig	exon	65417940	65417945	100	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1093 1088 .
ChrX	stalkie_big_nohaplotig	exon	65419103	65419106	100	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1097 1094 .
ChrX	stalkie_big_nohaplotig	exon	65427001	65427003	100	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1100 1098 .
ChrX	stalkie_big_nohaplotig	exon	65430503	65430513	90	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1111 1101 .
ChrX	stalkie_big_nohaplotig	exon	65430939	65430944	100	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1117 1112 .
ChrX	stalkie_big_nohaplotig	exon	65432207	65432209	100	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1120 1118 .
ChrX	stalkie_big_nohaplotig	exon	65439805	65439810	100	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1126 1121 .
ChrX	stalkie_big_nohaplotig	exon	65442376	65442377	100	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1128 1127 .
ChrX	stalkie_big_nohaplotig	exon	65465036	65465039	100	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1132 1129 .
ChrX	stalkie_big_nohaplotig	exon	65473052	65473059	100	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1140 1133 .
ChrX	stalkie_big_nohaplotig	exon	65473061	65473096	51	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1239 1186 .
ChrX	stalkie_big_nohaplotig	exon	65473340	65473348	100	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1248 1240 .
ChrX	stalkie_big_nohaplotig	exon	65476702	65476710	88	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1257 1249 .
ChrX	stalkie_big_nohaplotig	exon	65480036	65480044	100	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1266 1258 .
ChrX	stalkie_big_nohaplotig	exon	65488126	65488132	57	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1287 1283 .
ChrX	stalkie_big_nohaplotig	exon	65490615	65490669	56	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1343 1288 .
ChrX	stalkie_big_nohaplotig	exon	65498098	65498108	100	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1354 1344 .
ChrX	stalkie_big_nohaplotig	exon	65509612	65509622	100	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1431 1421 .
ChrX	stalkie_big_nohaplotig	exon	65519074	65519078	100	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1520 1516 .
ChrX	stalkie_big_nohaplotig	exon	65520886	65520891	100	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1526 1521 .
ChrX	stalkie_big_nohaplotig	exon	65535365	65535369	100	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1531 1527 .
ChrX	stalkie_big_nohaplotig	exon	65550180	65550188	100	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1540 1532 .
ChrX	stalkie_big_nohaplotig	exon	65552222	65552229	100	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1548 1541 .
ChrX	stalkie_big_nohaplotig	exon	65556921	65556935	80	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1563 1549 .
ChrX	stalkie_big_nohaplotig	exon	65562942	65562957	87	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1579 1564 .
ChrX	stalkie_big_nohaplotig	exon	65572347	65572423	49	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1681 1580 .
ChrX	stalkie_big_nohaplotig	exon	65586390	65586397	100	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1689 1682 .
ChrX	stalkie_big_nohaplotig	exon	65586418	65586425	100	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1739 1732 .
ChrX	stalkie_big_nohaplotig	exon	65587162	65587164	100	+	.	Parent=comp159734_c0_seq1.mrna1;Target=comp159734_c0_seq1 1742 1740 .
ChrX	stalkie_big_nohaplotig	CDS	64119105	64119338	.	+	0	Parent=comp159734_c0_seq1.mrna1
ChrX	gffcl	locus	64120562	64131337	.	-	.	ID=RLOC_00003683;geneIDs=FBgn0013984.1.path1;transcripts=FBgn0013984.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64120562	64131337	.	-	.	ID=FBgn0013984.1.mrna1;geneID=FBgn0013984.1.path1;Name=FBgn0013984.1;Dir=sensecoverage=100.0;identity=100.0;matches=4041;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003683
ChrX	stalkie_big_nohaplotig	exon	64120562	64122496	100	-	.	Parent=FBgn0013984.1.mrna1;Target=FBgn0013984.1 2107 4041 +
ChrX	stalkie_big_nohaplotig	exon	64123574	64123687	100	-	.	Parent=FBgn0013984.1.mrna1;Target=FBgn0013984.1 1993 2106 +
ChrX	stalkie_big_nohaplotig	exon	64123759	64123857	100	-	.	Parent=FBgn0013984.1.mrna1;Target=FBgn0013984.1 1894 1992 +
ChrX	stalkie_big_nohaplotig	exon	64123920	64125057	100	-	.	Parent=FBgn0013984.1.mrna1;Target=FBgn0013984.1 756 1893 +
ChrX	stalkie_big_nohaplotig	exon	64125115	64125411	100	-	.	Parent=FBgn0013984.1.mrna1;Target=FBgn0013984.1 459 755 +
ChrX	stalkie_big_nohaplotig	exon	64125479	64125674	100	-	.	Parent=FBgn0013984.1.mrna1;Target=FBgn0013984.1 263 458 +
ChrX	stalkie_big_nohaplotig	exon	64131076	64131337	100	-	.	Parent=FBgn0013984.1.mrna1;Target=FBgn0013984.1 1 262 +
ChrX	stalkie_big_nohaplotig	CDS	64120562	64122496	.	-	0	Parent=FBgn0013984.1.mrna1;Target=FBgn0013984.1 2107 4041 +
ChrX	stalkie_big_nohaplotig	CDS	64123574	64123687	.	-	0	Parent=FBgn0013984.1.mrna1;Target=FBgn0013984.1 1993 2106 +
ChrX	stalkie_big_nohaplotig	CDS	64123759	64123857	.	-	0	Parent=FBgn0013984.1.mrna1;Target=FBgn0013984.1 1894 1992 +
ChrX	stalkie_big_nohaplotig	CDS	64123920	64125057	.	-	1	Parent=FBgn0013984.1.mrna1;Target=FBgn0013984.1 756 1893 +
ChrX	stalkie_big_nohaplotig	CDS	64125115	64125411	.	-	1	Parent=FBgn0013984.1.mrna1;Target=FBgn0013984.1 459 755 +
ChrX	stalkie_big_nohaplotig	CDS	64125479	64125674	.	-	2	Parent=FBgn0013984.1.mrna1;Target=FBgn0013984.1 263 458 +
ChrX	stalkie_big_nohaplotig	CDS	64131076	64131337	.	-	0	Parent=FBgn0013984.1.mrna1;Target=FBgn0013984.1 1 262 +
ChrX	gffcl	locus	64206427	66035241	.	-	.	ID=RLOC_00003685;geneIDs=FBgn0069969.1.path1,comp146943_c0_seq1.path1;transcripts=comp146943_c0_seq1.mrna1,FBgn0069969.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64206427	66035241	.	-	.	ID=comp146943_c0_seq1.mrna1;geneID=comp146943_c0_seq1.path1;Name=comp146943_c0_seq1;Dir=sensecoverage=41.0;identity=100.0;matches=445;mismatches=0;indels=0;unknowns=0;Target=comp146943_c0_seq1 204 314 +;locus=RLOC_00003685
ChrX	stalkie_big_nohaplotig	exon	64206427	64206432	100	-	.	Parent=comp146943_c0_seq1.mrna1;Target=comp146943_c0_seq1 642 647 +
ChrX	stalkie_big_nohaplotig	exon	64208318	64208324	100	-	.	Parent=comp146943_c0_seq1.mrna1;Target=comp146943_c0_seq1 635 641 +
ChrX	stalkie_big_nohaplotig	exon	64209751	64209755	100	-	.	Parent=comp146943_c0_seq1.mrna1;Target=comp146943_c0_seq1 630 634 +
ChrX	stalkie_big_nohaplotig	exon	64210084	64210091	100	-	.	Parent=comp146943_c0_seq1.mrna1;Target=comp146943_c0_seq1 622 629 +
ChrX	stalkie_big_nohaplotig	exon	64210507	64210508	100	-	.	Parent=comp146943_c0_seq1.mrna1;Target=comp146943_c0_seq1 620 621 +
ChrX	stalkie_big_nohaplotig	exon	64215070	64215071	100	-	.	Parent=comp146943_c0_seq1.mrna1;Target=comp146943_c0_seq1 618 619 +
ChrX	stalkie_big_nohaplotig	exon	64218305	64218312	100	-	.	Parent=comp146943_c0_seq1.mrna1;Target=comp146943_c0_seq1 610 617 +
ChrX	stalkie_big_nohaplotig	exon	64225483	64225490	100	-	.	Parent=comp146943_c0_seq1.mrna1;Target=comp146943_c0_seq1 602 609 +
ChrX	stalkie_big_nohaplotig	exon	64231744	64231750	100	-	.	Parent=comp146943_c0_seq1.mrna1;Target=comp146943_c0_seq1 595 601 +
ChrX	stalkie_big_nohaplotig	exon	64238229	64238235	100	-	.	Parent=comp146943_c0_seq1.mrna1;Target=comp146943_c0_seq1 588 594 +
ChrX	stalkie_big_nohaplotig	exon	64241892	64241895	100	-	.	Parent=comp146943_c0_seq1.mrna1;Target=comp146943_c0_seq1 584 587 +
ChrX	stalkie_big_nohaplotig	exon	64249877	64249882	100	-	.	Parent=comp146943_c0_seq1.mrna1;Target=comp146943_c0_seq1 578 583 +
ChrX	stalkie_big_nohaplotig	exon	64254854	64254855	100	-	.	Parent=comp146943_c0_seq1.mrna1;Target=comp146943_c0_seq1 576 577 +
ChrX	stalkie_big_nohaplotig	exon	64260912	64260913	100	-	.	Parent=comp146943_c0_seq1.mrna1;Target=comp146943_c0_seq1 574 575 +
ChrX	stalkie_big_nohaplotig	exon	64265660	64265661	100	-	.	Parent=comp146943_c0_seq1.mrna1;Target=comp146943_c0_seq1 572 573 +
ChrX	stalkie_big_nohaplotig	exon	64269260	64269262	100	-	.	Parent=comp146943_c0_seq1.mrna1;Target=comp146943_c0_seq1 569 571 +
ChrX	stalkie_big_nohaplotig	exon	66034876	66035241	100	-	.	Parent=comp146943_c0_seq1.mrna1;Target=comp146943_c0_seq1 203 568 +
ChrX	stalkie_big_nohaplotig	CDS	66035130	66035240	.	-	0	Parent=comp146943_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64265504	64278053	.	-	.	ID=FBgn0069969.1.mrna1;geneID=FBgn0069969.1.path1;Name=FBgn0069969.1;Dir=sensecoverage=100.0;identity=100.0;matches=840;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003685
ChrX	stalkie_big_nohaplotig	exon	64265504	64265661	100	-	.	Parent=FBgn0069969.1.mrna1;Target=FBgn0069969.1 683 840 +
ChrX	stalkie_big_nohaplotig	exon	64267569	64267892	100	-	.	Parent=FBgn0069969.1.mrna1;Target=FBgn0069969.1 359 682 +
ChrX	stalkie_big_nohaplotig	exon	64267947	64268058	100	-	.	Parent=FBgn0069969.1.mrna1;Target=FBgn0069969.1 247 358 +
ChrX	stalkie_big_nohaplotig	exon	64269011	64269224	100	-	.	Parent=FBgn0069969.1.mrna1;Target=FBgn0069969.1 33 246 +
ChrX	stalkie_big_nohaplotig	exon	64278022	64278053	100	-	.	Parent=FBgn0069969.1.mrna1;Target=FBgn0069969.1 1 32 +
ChrX	stalkie_big_nohaplotig	CDS	64265504	64265661	.	-	2	Parent=FBgn0069969.1.mrna1;Target=FBgn0069969.1 683 840 +
ChrX	stalkie_big_nohaplotig	CDS	64267569	64267892	.	-	2	Parent=FBgn0069969.1.mrna1;Target=FBgn0069969.1 359 682 +
ChrX	stalkie_big_nohaplotig	CDS	64267947	64268058	.	-	0	Parent=FBgn0069969.1.mrna1;Target=FBgn0069969.1 247 358 +
ChrX	stalkie_big_nohaplotig	CDS	64269011	64269224	.	-	1	Parent=FBgn0069969.1.mrna1;Target=FBgn0069969.1 33 246 +
ChrX	stalkie_big_nohaplotig	CDS	64278022	64278053	.	-	0	Parent=FBgn0069969.1.mrna1;Target=FBgn0069969.1 1 32 +
ChrX	gffcl	locus	64218953	64219185	.	-	.	ID=RLOC_00003686;geneIDs=comp739318_c0_seq1.path1;transcripts=comp739318_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64218953	64219185	.	-	.	ID=comp739318_c0_seq1.mrna1;geneID=comp739318_c0_seq1.path1;Name=comp739318_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=233;mismatches=0;indels=0;unknowns=0;Target=comp739318_c0_seq1 233 1 .;CDS_Target=comp739318_c0_seq1 114 1 .;locus=RLOC_00003686
ChrX	stalkie_big_nohaplotig	exon	64218953	64219185	100	-	.	Parent=comp739318_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	64219072	64219185	.	-	0	Parent=comp739318_c0_seq1.mrna1
ChrX	gffcl	locus	64235452	64236101	.	+	.	ID=RLOC_00003687;geneIDs=FBgn0058439.1.path1;transcripts=FBgn0058439.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64235452	64236101	.	+	.	ID=FBgn0058439.1.mrna1;geneID=FBgn0058439.1.path1;Name=FBgn0058439.1;Dir=sensecoverage=100.0;identity=100.0;matches=594;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003687
ChrX	stalkie_big_nohaplotig	exon	64235452	64235541	100	+	.	Parent=FBgn0058439.1.mrna1;Target=FBgn0058439.1 1 90 +
ChrX	stalkie_big_nohaplotig	exon	64235598	64236101	100	+	.	Parent=FBgn0058439.1.mrna1;Target=FBgn0058439.1 91 594 +
ChrX	stalkie_big_nohaplotig	CDS	64235452	64235541	.	+	0	Parent=FBgn0058439.1.mrna1;Target=FBgn0058439.1 1 90 +
ChrX	stalkie_big_nohaplotig	CDS	64235598	64236101	.	+	0	Parent=FBgn0058439.1.mrna1;Target=FBgn0058439.1 91 594 +
ChrX	gffcl	locus	64239093	64243710	.	-	.	ID=RLOC_00003688;geneIDs=FBgn0040005.1.path1;transcripts=FBgn0040005.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64239093	64243710	.	-	.	ID=FBgn0040005.1.mrna1;geneID=FBgn0040005.1.path1;Name=FBgn0040005.1;Dir=sensecoverage=100.0;identity=100.0;matches=1209;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003688
ChrX	stalkie_big_nohaplotig	exon	64239093	64239303	100	-	.	Parent=FBgn0040005.1.mrna1;Target=FBgn0040005.1 999 1209 +
ChrX	stalkie_big_nohaplotig	exon	64239400	64239509	100	-	.	Parent=FBgn0040005.1.mrna1;Target=FBgn0040005.1 889 998 +
ChrX	stalkie_big_nohaplotig	exon	64242756	64243531	100	-	.	Parent=FBgn0040005.1.mrna1;Target=FBgn0040005.1 113 888 +
ChrX	stalkie_big_nohaplotig	exon	64243599	64243710	100	-	.	Parent=FBgn0040005.1.mrna1;Target=FBgn0040005.1 1 112 +
ChrX	stalkie_big_nohaplotig	CDS	64239093	64239303	.	-	1	Parent=FBgn0040005.1.mrna1;Target=FBgn0040005.1 999 1209 +
ChrX	stalkie_big_nohaplotig	CDS	64239400	64239509	.	-	0	Parent=FBgn0040005.1.mrna1;Target=FBgn0040005.1 889 998 +
ChrX	stalkie_big_nohaplotig	CDS	64242756	64243531	.	-	2	Parent=FBgn0040005.1.mrna1;Target=FBgn0040005.1 113 888 +
ChrX	stalkie_big_nohaplotig	CDS	64243599	64243710	.	-	0	Parent=FBgn0040005.1.mrna1;Target=FBgn0040005.1 1 112 +
ChrX	gffcl	locus	64262990	64263830	.	+	.	ID=RLOC_00003689;geneIDs=comp113476_c0_seq1.path1;transcripts=comp113476_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64262990	64263830	.	+	.	ID=comp113476_c0_seq1.mrna1;geneID=comp113476_c0_seq1.path1;Name=comp113476_c0_seq1;Dir=indeterminatecoverage=97.6;identity=99.9;matches=840;mismatches=1;indels=0;unknowns=0;Target=comp113476_c0_seq1 841 1 .;CDS_Target=comp113476_c0_seq1 384 193 .;locus=RLOC_00003689
ChrX	stalkie_big_nohaplotig	exon	64262990	64263830	99	+	.	Parent=comp113476_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	64263182	64263373	.	+	0	Parent=comp113476_c0_seq1.mrna1
ChrX	gffcl	locus	64264648	64265003	.	-	.	ID=RLOC_00003690;geneIDs=comp150202_c2_seq1.path1;transcripts=comp150202_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64264648	64265003	.	-	.	ID=comp150202_c2_seq1.mrna1;geneID=comp150202_c2_seq1.path1;Name=comp150202_c2_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=356;mismatches=0;indels=0;unknowns=0;Target=comp150202_c2_seq1 356 1 .;CDS_Target=comp150202_c2_seq1 235 149 .;locus=RLOC_00003690
ChrX	stalkie_big_nohaplotig	exon	64264648	64265003	100	-	.	Parent=comp150202_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	64264769	64264855	.	-	0	Parent=comp150202_c2_seq1.mrna1
ChrX	gffcl	locus	64278144	64278786	.	-	.	ID=RLOC_00003691;geneIDs=comp148331_c0_seq1.path1;transcripts=comp148331_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64278144	64278786	.	-	.	ID=comp148331_c0_seq1.mrna1;geneID=comp148331_c0_seq1.path1;Name=comp148331_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=641;mismatches=2;indels=0;unknowns=0;Target=comp148331_c0_seq1 643 1 .;CDS_Target=comp148331_c0_seq1 44 3 .;locus=RLOC_00003691
ChrX	stalkie_big_nohaplotig	exon	64278144	64278786	99	-	.	Parent=comp148331_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	64278743	64278784	.	-	0	Parent=comp148331_c0_seq1.mrna1
ChrX	gffcl	locus	64294427	64296061	.	+	.	ID=RLOC_00003693;geneIDs=FBgn0039993.1.path1;transcripts=FBgn0039993.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64294427	64296061	.	+	.	ID=FBgn0039993.1.mrna1;geneID=FBgn0039993.1.path1;Name=FBgn0039993.1;Dir=sensecoverage=100.0;identity=100.0;matches=1119;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003693
ChrX	stalkie_big_nohaplotig	exon	64294427	64295227	100	+	.	Parent=FBgn0039993.1.mrna1;Target=FBgn0039993.1 1 801 +
ChrX	stalkie_big_nohaplotig	exon	64295682	64295774	100	+	.	Parent=FBgn0039993.1.mrna1;Target=FBgn0039993.1 802 894 +
ChrX	stalkie_big_nohaplotig	exon	64295837	64296061	100	+	.	Parent=FBgn0039993.1.mrna1;Target=FBgn0039993.1 895 1119 +
ChrX	stalkie_big_nohaplotig	CDS	64294427	64295227	.	+	0	Parent=FBgn0039993.1.mrna1;Target=FBgn0039993.1 1 801 +
ChrX	stalkie_big_nohaplotig	CDS	64295682	64295774	.	+	0	Parent=FBgn0039993.1.mrna1;Target=FBgn0039993.1 802 894 +
ChrX	stalkie_big_nohaplotig	CDS	64295837	64296061	.	+	0	Parent=FBgn0039993.1.mrna1;Target=FBgn0039993.1 895 1119 +
ChrX	gffcl	locus	64296792	64299602	.	-	.	ID=RLOC_00003694;geneIDs=FBgn0039969.1.path1;transcripts=FBgn0039969.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64296792	64299602	.	-	.	ID=FBgn0039969.1.mrna1;geneID=FBgn0039969.1.path1;Name=FBgn0039969.1;Dir=sensecoverage=100.0;identity=100.0;matches=483;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003694
ChrX	stalkie_big_nohaplotig	exon	64296792	64296810	100	-	.	Parent=FBgn0039969.1.mrna1;Target=FBgn0039969.1 465 483 +
ChrX	stalkie_big_nohaplotig	exon	64296984	64297096	100	-	.	Parent=FBgn0039969.1.mrna1;Target=FBgn0039969.1 352 464 +
ChrX	stalkie_big_nohaplotig	exon	64299081	64299248	100	-	.	Parent=FBgn0039969.1.mrna1;Target=FBgn0039969.1 184 351 +
ChrX	stalkie_big_nohaplotig	exon	64299335	64299451	100	-	.	Parent=FBgn0039969.1.mrna1;Target=FBgn0039969.1 67 183 +
ChrX	stalkie_big_nohaplotig	exon	64299537	64299602	100	-	.	Parent=FBgn0039969.1.mrna1;Target=FBgn0039969.1 1 66 +
ChrX	stalkie_big_nohaplotig	CDS	64296792	64296810	.	-	1	Parent=FBgn0039969.1.mrna1;Target=FBgn0039969.1 465 483 +
ChrX	stalkie_big_nohaplotig	CDS	64296984	64297096	.	-	0	Parent=FBgn0039969.1.mrna1;Target=FBgn0039969.1 352 464 +
ChrX	stalkie_big_nohaplotig	CDS	64299081	64299248	.	-	0	Parent=FBgn0039969.1.mrna1;Target=FBgn0039969.1 184 351 +
ChrX	stalkie_big_nohaplotig	CDS	64299335	64299451	.	-	0	Parent=FBgn0039969.1.mrna1;Target=FBgn0039969.1 67 183 +
ChrX	stalkie_big_nohaplotig	CDS	64299537	64299602	.	-	0	Parent=FBgn0039969.1.mrna1;Target=FBgn0039969.1 1 66 +
ChrX	gffcl	locus	64297203	64297745	.	+	.	ID=RLOC_00003695;geneIDs=comp146893_c0_seq1.path1;transcripts=comp146893_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64297203	64297745	.	+	.	ID=comp146893_c0_seq1.mrna1;geneID=comp146893_c0_seq1.path1;Name=comp146893_c0_seq1;Dir=indeterminatecoverage=96.1;identity=86.9;matches=519;mismatches=21;indels=57;unknowns=0;Target=comp146893_c0_seq1 618 25 .;CDS_Target=comp146893_c0_seq1 267 232 .;locus=RLOC_00003695
ChrX	stalkie_big_nohaplotig	exon	64297203	64297745	86	+	.	Parent=comp146893_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	64297381	64297417	.	+	0	Parent=comp146893_c0_seq1.mrna1
ChrX	gffcl	locus	64312070	64312738	.	-	.	ID=RLOC_00003697;geneIDs=comp118075_c0_seq1.path1;transcripts=comp118075_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64312070	64312738	.	-	.	ID=comp118075_c0_seq1.mrna1;geneID=comp118075_c0_seq1.path1;Name=comp118075_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=668;mismatches=0;indels=1;unknowns=0;Target=comp118075_c0_seq1 668 1 .;CDS_Target=comp118075_c0_seq1 226 86 .;locus=RLOC_00003697
ChrX	stalkie_big_nohaplotig	exon	64312070	64312738	99	-	.	Parent=comp118075_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	64312512	64312652	.	-	0	Parent=comp118075_c0_seq1.mrna1
ChrX	gffcl	locus	64320768	64322712	.	+	.	ID=RLOC_00003699;geneIDs=comp163812_c0_seq1.path5;transcripts=comp163812_c0_seq1.mrna5
ChrX	stalkie_big_nohaplotig	mRNA	64320768	64322712	.	+	.	ID=comp163812_c0_seq1.mrna5;geneID=comp163812_c0_seq1.path5;Name=comp163812_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=1906;mismatches=39;indels=0;unknowns=0;Target=comp163812_c0_seq1 1945 1 .;CDS_Target=comp163812_c0_seq1 1945 2 .;locus=RLOC_00003699
ChrX	stalkie_big_nohaplotig	exon	64320768	64322712	97	+	.	Parent=comp163812_c0_seq1.mrna5
ChrX	stalkie_big_nohaplotig	CDS	64320769	64322712	.	+	0	Parent=comp163812_c0_seq1.mrna5
ChrX	gffcl	locus	64406517	64408461	.	-	.	ID=RLOC_00003700;geneIDs=comp163812_c0_seq1.path1;transcripts=comp163812_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64406517	64408461	.	-	.	ID=comp163812_c0_seq1.mrna1;geneID=comp163812_c0_seq1.path1;Name=comp163812_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=1910;mismatches=35;indels=0;unknowns=0;Target=comp163812_c0_seq1 1945 1 .;CDS_Target=comp163812_c0_seq1 1945 2 .;locus=RLOC_00003700
ChrX	stalkie_big_nohaplotig	exon	64406517	64408461	98	-	.	Parent=comp163812_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	64406517	64408460	.	-	0	Parent=comp163812_c0_seq1.mrna1
ChrX	gffcl	locus	64454753	64480041	.	+	.	ID=RLOC_00003702;geneIDs=comp157230_c0_seq1.path1;transcripts=comp157230_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64454753	64480041	.	+	.	ID=comp157230_c0_seq1.mrna1;geneID=comp157230_c0_seq1.path1;Name=comp157230_c0_seq1;Dir=sensecoverage=100.0;identity=98.0;matches=1038;mismatches=9;indels=12;unknowns=0;Target=comp157230_c0_seq1 449 613 +;locus=RLOC_00003702
ChrX	stalkie_big_nohaplotig	exon	64454753	64455095	94	+	.	Parent=comp157230_c0_seq1.mrna1;Target=comp157230_c0_seq1 1 347 +
ChrX	stalkie_big_nohaplotig	exon	64479334	64480041	100	+	.	Parent=comp157230_c0_seq1.mrna1;Target=comp157230_c0_seq1 348 1055 +
ChrX	stalkie_big_nohaplotig	CDS	64479435	64479599	.	+	0	Parent=comp157230_c0_seq1.mrna1
ChrX	gffcl	locus	64473488	64474240	.	+	.	ID=RLOC_00003703;geneIDs=ORF3150.path1;transcripts=ORF3150.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64473488	64474240	.	+	.	ID=ORF3150.mrna1;geneID=ORF3150.path1;Name=ORF3150;Dir=indeterminatecoverage=100.0;identity=93.6;matches=713;mismatches=40;indels=9;unknowns=0;Target=ORF3150 762 1 .;locus=RLOC_00003703
ChrX	stalkie_big_nohaplotig	exon	64473488	64474240	93	+	.	Parent=ORF3150.mrna1
ChrX	stalkie_big_nohaplotig	CDS	64473488	64474240	.	+	0	Parent=ORF3150.mrna1
ChrX	gffcl	locus	64522357	64523244	.	+	.	ID=RLOC_00003704;geneIDs=FBgn0023519.1.path2;transcripts=FBgn0023519.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	64522357	64523244	.	+	.	ID=FBgn0023519.1.mrna2;geneID=FBgn0023519.1.path2;Name=FBgn0023519.1;Dir=sensecoverage=100.0;identity=100.0;matches=780;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003704
ChrX	stalkie_big_nohaplotig	exon	64522357	64522453	100	+	.	Parent=FBgn0023519.1.mrna2;Target=FBgn0023519.1 1 97 +
ChrX	stalkie_big_nohaplotig	exon	64522507	64522575	100	+	.	Parent=FBgn0023519.1.mrna2;Target=FBgn0023519.1 98 166 +
ChrX	stalkie_big_nohaplotig	exon	64522631	64523244	100	+	.	Parent=FBgn0023519.1.mrna2;Target=FBgn0023519.1 167 780 +
ChrX	stalkie_big_nohaplotig	CDS	64522357	64522453	.	+	0	Parent=FBgn0023519.1.mrna2;Target=FBgn0023519.1 1 97 +
ChrX	stalkie_big_nohaplotig	CDS	64522507	64522575	.	+	2	Parent=FBgn0023519.1.mrna2;Target=FBgn0023519.1 98 166 +
ChrX	stalkie_big_nohaplotig	CDS	64522631	64523244	.	+	2	Parent=FBgn0023519.1.mrna2;Target=FBgn0023519.1 167 780 +
ChrX	gffcl	locus	64523662	64531340	.	-	.	ID=RLOC_00003705;geneIDs=comp145703_c0_seq1.path2;transcripts=comp145703_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	64523662	64531340	.	-	.	ID=comp145703_c0_seq1.mrna2;geneID=comp145703_c0_seq1.path2;Name=comp145703_c0_seq1;Dir=indeterminatecoverage=71.0;identity=99.7;matches=356;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003705
ChrX	stalkie_big_nohaplotig	exon	64523662	64524007	100	-	.	Parent=comp145703_c0_seq1.mrna2;Target=comp145703_c0_seq1 503 158 .
ChrX	stalkie_big_nohaplotig	exon	64531330	64531340	90	-	.	Parent=comp145703_c0_seq1.mrna2;Target=comp145703_c0_seq1 157 147 .
ChrX	stalkie_big_nohaplotig	CDS	64523892	64524007	.	-	2	Parent=comp145703_c0_seq1.mrna2;Target=comp145703_c0_seq1 273 158 .
ChrX	stalkie_big_nohaplotig	CDS	64531330	64531339	.	-	0	Parent=comp145703_c0_seq1.mrna2;Target=comp145703_c0_seq1 157 148 .
ChrX	gffcl	locus	64545809	64578653	.	-	.	ID=RLOC_00003706;geneIDs=FBgn0004009.1.path1;transcripts=FBgn0004009.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64545809	64578653	.	-	.	ID=FBgn0004009.1.mrna1;geneID=FBgn0004009.1.path1;Name=FBgn0004009.1;Dir=sensecoverage=100.0;identity=99.9;matches=1226;mismatches=0;indels=1;unknowns=0;locus=RLOC_00003706
ChrX	stalkie_big_nohaplotig	exon	64545809	64545946	99	-	.	Parent=FBgn0004009.1.mrna1;Target=FBgn0004009.1 1089 1227 +
ChrX	stalkie_big_nohaplotig	exon	64546120	64546535	100	-	.	Parent=FBgn0004009.1.mrna1;Target=FBgn0004009.1 673 1088 +
ChrX	stalkie_big_nohaplotig	exon	64547687	64547988	100	-	.	Parent=FBgn0004009.1.mrna1;Target=FBgn0004009.1 371 672 +
ChrX	stalkie_big_nohaplotig	exon	64567188	64567450	100	-	.	Parent=FBgn0004009.1.mrna1;Target=FBgn0004009.1 108 370 +
ChrX	stalkie_big_nohaplotig	exon	64578547	64578653	100	-	.	Parent=FBgn0004009.1.mrna1;Target=FBgn0004009.1 1 107 +
ChrX	stalkie_big_nohaplotig	CDS	64545809	64545946	.	-	1	Parent=FBgn0004009.1.mrna1;Target=FBgn0004009.1 1089 1227 +
ChrX	stalkie_big_nohaplotig	CDS	64546120	64546535	.	-	0	Parent=FBgn0004009.1.mrna1;Target=FBgn0004009.1 673 1088 +
ChrX	stalkie_big_nohaplotig	CDS	64547687	64547988	.	-	2	Parent=FBgn0004009.1.mrna1;Target=FBgn0004009.1 371 672 +
ChrX	stalkie_big_nohaplotig	CDS	64567188	64567450	.	-	1	Parent=FBgn0004009.1.mrna1;Target=FBgn0004009.1 108 370 +
ChrX	stalkie_big_nohaplotig	CDS	64578547	64578653	.	-	0	Parent=FBgn0004009.1.mrna1;Target=FBgn0004009.1 1 107 +
ChrX	gffcl	locus	64572593	64573238	.	-	.	ID=RLOC_00003707;geneIDs=comp118988_c0_seq1.path1;transcripts=comp118988_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64572593	64573238	.	-	.	ID=comp118988_c0_seq1.mrna1;geneID=comp118988_c0_seq1.path1;Name=comp118988_c0_seq1;Dir=indeterminatecoverage=99.5;identity=100.0;matches=646;mismatches=0;indels=0;unknowns=0;Target=comp118988_c0_seq1 649 4 .;CDS_Target=comp118988_c0_seq1 107 6 .;locus=RLOC_00003707
ChrX	stalkie_big_nohaplotig	exon	64572593	64573238	100	-	.	Parent=comp118988_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	64573135	64573236	.	-	0	Parent=comp118988_c0_seq1.mrna1
ChrX	gffcl	locus	64578970	64579351	.	+	.	ID=RLOC_00003708;geneIDs=comp1915963_c0_seq1.path1;transcripts=comp1915963_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64578970	64579351	.	+	.	ID=comp1915963_c0_seq1.mrna1;geneID=comp1915963_c0_seq1.path1;Name=comp1915963_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=382;mismatches=0;indels=0;unknowns=0;Target=comp1915963_c0_seq1 382 1 .;CDS_Target=comp1915963_c0_seq1 338 162 .;locus=RLOC_00003708
ChrX	stalkie_big_nohaplotig	exon	64578970	64579351	100	+	.	Parent=comp1915963_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	64579131	64579307	.	+	0	Parent=comp1915963_c0_seq1.mrna1
ChrX	gffcl	locus	64773525	64774575	.	-	.	ID=RLOC_00003709;geneIDs=comp71751_c0_seq1.path1;transcripts=comp71751_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64773525	64774575	.	-	.	ID=comp71751_c0_seq1.mrna1;geneID=comp71751_c0_seq1.path1;Name=comp71751_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1050;mismatches=1;indels=0;unknowns=0;Target=comp71751_c0_seq1 1051 1 .;CDS_Target=comp71751_c0_seq1 704 573 .;locus=RLOC_00003709
ChrX	stalkie_big_nohaplotig	exon	64773525	64774575	99	-	.	Parent=comp71751_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	64773872	64774003	.	-	0	Parent=comp71751_c0_seq1.mrna1
ChrX	gffcl	locus	64774830	64862547	.	+	.	ID=RLOC_00003710;geneIDs=FBgn0010453.1.path1;transcripts=FBgn0010453.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64774830	64862547	.	+	.	ID=FBgn0010453.1.mrna1;geneID=FBgn0010453.1.path1;Name=FBgn0010453.1;Dir=sensecoverage=100.0;identity=100.0;matches=1527;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003710
ChrX	stalkie_big_nohaplotig	exon	64774830	64775389	100	+	.	Parent=FBgn0010453.1.mrna1;Target=FBgn0010453.1 1 560 +
ChrX	stalkie_big_nohaplotig	exon	64861441	64861939	100	+	.	Parent=FBgn0010453.1.mrna1;Target=FBgn0010453.1 561 1059 +
ChrX	stalkie_big_nohaplotig	exon	64862016	64862246	100	+	.	Parent=FBgn0010453.1.mrna1;Target=FBgn0010453.1 1060 1290 +
ChrX	stalkie_big_nohaplotig	exon	64862311	64862547	100	+	.	Parent=FBgn0010453.1.mrna1;Target=FBgn0010453.1 1291 1527 +
ChrX	stalkie_big_nohaplotig	CDS	64774830	64775389	.	+	0	Parent=FBgn0010453.1.mrna1;Target=FBgn0010453.1 1 560 +
ChrX	stalkie_big_nohaplotig	CDS	64861441	64861939	.	+	1	Parent=FBgn0010453.1.mrna1;Target=FBgn0010453.1 561 1059 +
ChrX	stalkie_big_nohaplotig	CDS	64862016	64862246	.	+	0	Parent=FBgn0010453.1.mrna1;Target=FBgn0010453.1 1060 1290 +
ChrX	stalkie_big_nohaplotig	CDS	64862311	64862547	.	+	0	Parent=FBgn0010453.1.mrna1;Target=FBgn0010453.1 1291 1527 +
ChrX	gffcl	locus	64882284	64975546	.	+	.	ID=RLOC_00003711;geneIDs=FBgn0259111.1.path1,comp158225_c0_seq1.path1;transcripts=comp158225_c0_seq1.mrna1,FBgn0259111.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64882284	64942680	.	+	.	ID=comp158225_c0_seq1.mrna1;geneID=comp158225_c0_seq1.path1;Name=comp158225_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=4674;mismatches=1;indels=1;unknowns=0;locus=RLOC_00003711
ChrX	stalkie_big_nohaplotig	exon	64882284	64882856	100	+	.	Parent=comp158225_c0_seq1.mrna1;Target=comp158225_c0_seq1 1 573 +
ChrX	stalkie_big_nohaplotig	exon	64900183	64900286	100	+	.	Parent=comp158225_c0_seq1.mrna1;Target=comp158225_c0_seq1 574 677 +
ChrX	stalkie_big_nohaplotig	exon	64901106	64901231	100	+	.	Parent=comp158225_c0_seq1.mrna1;Target=comp158225_c0_seq1 678 803 +
ChrX	stalkie_big_nohaplotig	exon	64902670	64903143	100	+	.	Parent=comp158225_c0_seq1.mrna1;Target=comp158225_c0_seq1 804 1277 +
ChrX	stalkie_big_nohaplotig	exon	64915820	64916007	100	+	.	Parent=comp158225_c0_seq1.mrna1;Target=comp158225_c0_seq1 1278 1465 +
ChrX	stalkie_big_nohaplotig	exon	64916068	64916111	100	+	.	Parent=comp158225_c0_seq1.mrna1;Target=comp158225_c0_seq1 1466 1509 +
ChrX	stalkie_big_nohaplotig	exon	64926235	64927045	100	+	.	Parent=comp158225_c0_seq1.mrna1;Target=comp158225_c0_seq1 1510 2320 +
ChrX	stalkie_big_nohaplotig	exon	64927114	64927248	100	+	.	Parent=comp158225_c0_seq1.mrna1;Target=comp158225_c0_seq1 2321 2455 +
ChrX	stalkie_big_nohaplotig	exon	64927304	64927806	100	+	.	Parent=comp158225_c0_seq1.mrna1;Target=comp158225_c0_seq1 2456 2958 +
ChrX	stalkie_big_nohaplotig	exon	64927873	64928185	100	+	.	Parent=comp158225_c0_seq1.mrna1;Target=comp158225_c0_seq1 2959 3271 +
ChrX	stalkie_big_nohaplotig	exon	64941276	64942680	99	+	.	Parent=comp158225_c0_seq1.mrna1;Target=comp158225_c0_seq1 3272 4675 +
ChrX	stalkie_big_nohaplotig	CDS	64900193	64900286	.	+	0	Parent=comp158225_c0_seq1.mrna1;Target=comp158225_c0_seq1 584 677 +
ChrX	stalkie_big_nohaplotig	CDS	64901106	64901231	.	+	2	Parent=comp158225_c0_seq1.mrna1;Target=comp158225_c0_seq1 678 803 +
ChrX	stalkie_big_nohaplotig	CDS	64902670	64903143	.	+	2	Parent=comp158225_c0_seq1.mrna1;Target=comp158225_c0_seq1 804 1277 +
ChrX	stalkie_big_nohaplotig	CDS	64915820	64916007	.	+	2	Parent=comp158225_c0_seq1.mrna1;Target=comp158225_c0_seq1 1278 1465 +
ChrX	stalkie_big_nohaplotig	CDS	64916068	64916111	.	+	0	Parent=comp158225_c0_seq1.mrna1;Target=comp158225_c0_seq1 1466 1509 +
ChrX	stalkie_big_nohaplotig	CDS	64926235	64927045	.	+	1	Parent=comp158225_c0_seq1.mrna1;Target=comp158225_c0_seq1 1510 2320 +
ChrX	stalkie_big_nohaplotig	CDS	64927114	64927248	.	+	0	Parent=comp158225_c0_seq1.mrna1;Target=comp158225_c0_seq1 2321 2455 +
ChrX	stalkie_big_nohaplotig	CDS	64927304	64927806	.	+	0	Parent=comp158225_c0_seq1.mrna1;Target=comp158225_c0_seq1 2456 2958 +
ChrX	stalkie_big_nohaplotig	CDS	64927873	64928185	.	+	1	Parent=comp158225_c0_seq1.mrna1;Target=comp158225_c0_seq1 2959 3271 +
ChrX	stalkie_big_nohaplotig	CDS	64941276	64941671	.	+	0	Parent=comp158225_c0_seq1.mrna1;Target=comp158225_c0_seq1 3272 3667 +
ChrX	stalkie_big_nohaplotig	mRNA	64890683	64975546	.	+	.	ID=FBgn0259111.1.mrna1;geneID=FBgn0259111.1.path1;Name=FBgn0259111.1;Dir=sensecoverage=100.0;identity=100.0;matches=3309;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003711
ChrX	stalkie_big_nohaplotig	exon	64890683	64890747	100	+	.	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 1 65 +
ChrX	stalkie_big_nohaplotig	exon	64900183	64900286	100	+	.	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 66 169 +
ChrX	stalkie_big_nohaplotig	exon	64901106	64901231	100	+	.	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 170 295 +
ChrX	stalkie_big_nohaplotig	exon	64902670	64903143	100	+	.	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 296 769 +
ChrX	stalkie_big_nohaplotig	exon	64915820	64916007	100	+	.	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 770 957 +
ChrX	stalkie_big_nohaplotig	exon	64916068	64916111	100	+	.	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 958 1001 +
ChrX	stalkie_big_nohaplotig	exon	64926235	64927045	100	+	.	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 1002 1812 +
ChrX	stalkie_big_nohaplotig	exon	64927114	64927248	100	+	.	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 1813 1947 +
ChrX	stalkie_big_nohaplotig	exon	64927304	64927806	100	+	.	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 1948 2450 +
ChrX	stalkie_big_nohaplotig	exon	64927873	64928185	100	+	.	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 2451 2763 +
ChrX	stalkie_big_nohaplotig	exon	64941276	64941518	100	+	.	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 2764 3006 +
ChrX	stalkie_big_nohaplotig	exon	64969678	64969880	100	+	.	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 3007 3209 +
ChrX	stalkie_big_nohaplotig	exon	64975447	64975546	100	+	.	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 3210 3309 +
ChrX	stalkie_big_nohaplotig	CDS	64890683	64890747	.	+	0	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 1 65 +
ChrX	stalkie_big_nohaplotig	CDS	64900183	64900286	.	+	1	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 66 169 +
ChrX	stalkie_big_nohaplotig	CDS	64901106	64901231	.	+	2	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 170 295 +
ChrX	stalkie_big_nohaplotig	CDS	64902670	64903143	.	+	2	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 296 769 +
ChrX	stalkie_big_nohaplotig	CDS	64915820	64916007	.	+	2	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 770 957 +
ChrX	stalkie_big_nohaplotig	CDS	64916068	64916111	.	+	0	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 958 1001 +
ChrX	stalkie_big_nohaplotig	CDS	64926235	64927045	.	+	1	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 1002 1812 +
ChrX	stalkie_big_nohaplotig	CDS	64927114	64927248	.	+	0	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 1813 1947 +
ChrX	stalkie_big_nohaplotig	CDS	64927304	64927806	.	+	0	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 1948 2450 +
ChrX	stalkie_big_nohaplotig	CDS	64927873	64928185	.	+	1	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 2451 2763 +
ChrX	stalkie_big_nohaplotig	CDS	64941276	64941518	.	+	0	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 2764 3006 +
ChrX	stalkie_big_nohaplotig	CDS	64969678	64969880	.	+	0	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 3007 3209 +
ChrX	stalkie_big_nohaplotig	CDS	64975447	64975546	.	+	1	Parent=FBgn0259111.1.mrna1;Target=FBgn0259111.1 3210 3309 +
ChrX	gffcl	locus	64945344	64946218	.	+	.	ID=RLOC_00003712;geneIDs=comp149966_c0_seq1.path1;transcripts=comp149966_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64945344	64946218	.	+	.	ID=comp149966_c0_seq1.mrna1;geneID=comp149966_c0_seq1.path1;Name=comp149966_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=873;mismatches=2;indels=0;unknowns=0;Target=comp149966_c0_seq1 875 1 .;CDS_Target=comp149966_c0_seq1 258 133 .;locus=RLOC_00003712
ChrX	stalkie_big_nohaplotig	exon	64945344	64946218	99	+	.	Parent=comp149966_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	64945476	64945601	.	+	0	Parent=comp149966_c0_seq1.mrna1
ChrX	gffcl	locus	64948264	64949696	.	+	.	ID=RLOC_00003713;geneIDs=comp146029_c0_seq1.path1;transcripts=comp146029_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64948264	64949696	.	+	.	ID=comp146029_c0_seq1.mrna1;geneID=comp146029_c0_seq1.path1;Name=comp146029_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=1433;mismatches=0;indels=0;unknowns=0;Target=comp146029_c0_seq1 1433 1 .;CDS_Target=comp146029_c0_seq1 1307 1167 .;locus=RLOC_00003713
ChrX	stalkie_big_nohaplotig	exon	64948264	64949696	100	+	.	Parent=comp146029_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	64949430	64949570	.	+	0	Parent=comp146029_c0_seq1.mrna1
ChrX	gffcl	locus	64949732	64950307	.	-	.	ID=RLOC_00003714;geneIDs=comp116911_c0_seq1.path1;transcripts=comp116911_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64949732	64950307	.	-	.	ID=comp116911_c0_seq1.mrna1;geneID=comp116911_c0_seq1.path1;Name=comp116911_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=576;mismatches=0;indels=0;unknowns=0;Target=comp116911_c0_seq1 576 1 .;CDS_Target=comp116911_c0_seq1 491 381 .;locus=RLOC_00003714
ChrX	stalkie_big_nohaplotig	exon	64949732	64950307	100	-	.	Parent=comp116911_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	64949817	64949927	.	-	0	Parent=comp116911_c0_seq1.mrna1
ChrX	gffcl	locus	64951605	64952164	.	-	.	ID=RLOC_00003715;geneIDs=comp162296_c0_seq1.path1;transcripts=comp162296_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64951605	64952164	.	-	.	ID=comp162296_c0_seq1.mrna1;geneID=comp162296_c0_seq1.path1;Name=comp162296_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=560;mismatches=0;indels=0;unknowns=0;Target=comp162296_c0_seq1 560 1 .;CDS_Target=comp162296_c0_seq1 558 415 .;locus=RLOC_00003715
ChrX	stalkie_big_nohaplotig	exon	64951605	64952164	100	-	.	Parent=comp162296_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	64951607	64951750	.	-	0	Parent=comp162296_c0_seq1.mrna1
ChrX	gffcl	locus	64954663	64955438	.	+	.	ID=RLOC_00003716;geneIDs=comp150901_c1_seq1.path1;transcripts=comp150901_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64954663	64955438	.	+	.	ID=comp150901_c1_seq1.mrna1;geneID=comp150901_c1_seq1.path1;Name=comp150901_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=773;mismatches=3;indels=0;unknowns=0;Target=comp150901_c1_seq1 776 1 .;CDS_Target=comp150901_c1_seq1 466 347 .;locus=RLOC_00003716
ChrX	stalkie_big_nohaplotig	exon	64954663	64955438	99	+	.	Parent=comp150901_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	64955009	64955128	.	+	0	Parent=comp150901_c1_seq1.mrna1
ChrX	gffcl	locus	64973167	64973372	.	-	.	ID=RLOC_00003717;geneIDs=comp114438_c0_seq1.path1;transcripts=comp114438_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64973167	64973372	.	-	.	ID=comp114438_c0_seq1.mrna1;geneID=comp114438_c0_seq1.path1;Name=comp114438_c0_seq1;Dir=indeterminatecoverage=79.8;identity=98.1;matches=202;mismatches=4;indels=0;unknowns=0;Target=comp114438_c0_seq1 206 1 .;CDS_Target=comp114438_c0_seq1 204 151 .;locus=RLOC_00003717
ChrX	stalkie_big_nohaplotig	exon	64973167	64973372	98	-	.	Parent=comp114438_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	64973169	64973222	.	-	0	Parent=comp114438_c0_seq1.mrna1
ChrX	gffcl	locus	64986167	64988763	.	+	.	ID=RLOC_00003718;geneIDs=FBgn0263133.1.path1;transcripts=FBgn0263133.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64986167	64988763	.	+	.	ID=FBgn0263133.1.mrna1;geneID=FBgn0263133.1.path1;Name=FBgn0263133.1;Dir=sensecoverage=100.0;identity=100.0;matches=2343;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003718
ChrX	stalkie_big_nohaplotig	exon	64986167	64986349	100	+	.	Parent=FBgn0263133.1.mrna1;Target=FBgn0263133.1 1 183 +
ChrX	stalkie_big_nohaplotig	exon	64986489	64987887	100	+	.	Parent=FBgn0263133.1.mrna1;Target=FBgn0263133.1 184 1582 +
ChrX	stalkie_big_nohaplotig	exon	64987942	64988563	100	+	.	Parent=FBgn0263133.1.mrna1;Target=FBgn0263133.1 1583 2204 +
ChrX	stalkie_big_nohaplotig	exon	64988625	64988763	100	+	.	Parent=FBgn0263133.1.mrna1;Target=FBgn0263133.1 2205 2343 +
ChrX	stalkie_big_nohaplotig	CDS	64986167	64986349	.	+	0	Parent=FBgn0263133.1.mrna1;Target=FBgn0263133.1 1 183 +
ChrX	stalkie_big_nohaplotig	CDS	64986489	64987887	.	+	0	Parent=FBgn0263133.1.mrna1;Target=FBgn0263133.1 184 1582 +
ChrX	stalkie_big_nohaplotig	CDS	64987942	64988563	.	+	2	Parent=FBgn0263133.1.mrna1;Target=FBgn0263133.1 1583 2204 +
ChrX	stalkie_big_nohaplotig	CDS	64988625	64988763	.	+	1	Parent=FBgn0263133.1.mrna1;Target=FBgn0263133.1 2205 2343 +
ChrX	gffcl	locus	64990470	64991138	.	+	.	ID=RLOC_00003719;geneIDs=comp135911_c0_seq1.path1;transcripts=comp135911_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64990470	64991138	.	+	.	ID=comp135911_c0_seq1.mrna1;geneID=comp135911_c0_seq1.path1;Name=comp135911_c0_seq1;Dir=indeterminatecoverage=99.0;identity=100.0;matches=669;mismatches=0;indels=0;unknowns=0;Target=comp135911_c0_seq1 676 8 .;CDS_Target=comp135911_c0_seq1 354 295 .;locus=RLOC_00003719
ChrX	stalkie_big_nohaplotig	exon	64990470	64991138	100	+	.	Parent=comp135911_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	64990757	64990816	.	+	0	Parent=comp135911_c0_seq1.mrna1
ChrX	gffcl	locus	64997587	65003790	.	+	.	ID=RLOC_00003720;geneIDs=FBgn0000318.2.path1;transcripts=FBgn0000318.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	64997587	65003790	.	+	.	ID=FBgn0000318.2.mrna1;geneID=FBgn0000318.2.path1;Name=FBgn0000318.2;Dir=sensecoverage=100.0;identity=100.0;matches=399;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003720
ChrX	stalkie_big_nohaplotig	exon	64997587	64997752	100	+	.	Parent=FBgn0000318.2.mrna1;Target=FBgn0000318.2 1 166 +
ChrX	stalkie_big_nohaplotig	exon	64997815	64997896	100	+	.	Parent=FBgn0000318.2.mrna1;Target=FBgn0000318.2 167 248 +
ChrX	stalkie_big_nohaplotig	exon	65003640	65003790	100	+	.	Parent=FBgn0000318.2.mrna1;Target=FBgn0000318.2 249 399 +
ChrX	stalkie_big_nohaplotig	CDS	64997587	64997752	.	+	0	Parent=FBgn0000318.2.mrna1;Target=FBgn0000318.2 1 166 +
ChrX	stalkie_big_nohaplotig	CDS	64997815	64997896	.	+	2	Parent=FBgn0000318.2.mrna1;Target=FBgn0000318.2 167 248 +
ChrX	stalkie_big_nohaplotig	CDS	65003640	65003790	.	+	1	Parent=FBgn0000318.2.mrna1;Target=FBgn0000318.2 249 399 +
ChrX	gffcl	locus	65003879	65007245	.	-	.	ID=RLOC_00003721;geneIDs=FBgn0031710.1.path1;transcripts=FBgn0031710.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65003879	65007245	.	-	.	ID=FBgn0031710.1.mrna1;geneID=FBgn0031710.1.path1;Name=FBgn0031710.1;Dir=sensecoverage=100.0;identity=100.0;matches=2019;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003721
ChrX	stalkie_big_nohaplotig	exon	65003879	65004505	100	-	.	Parent=FBgn0031710.1.mrna1;Target=FBgn0031710.1 1393 2019 +
ChrX	stalkie_big_nohaplotig	exon	65004563	65004683	100	-	.	Parent=FBgn0031710.1.mrna1;Target=FBgn0031710.1 1272 1392 +
ChrX	stalkie_big_nohaplotig	exon	65005717	65005835	100	-	.	Parent=FBgn0031710.1.mrna1;Target=FBgn0031710.1 1153 1271 +
ChrX	stalkie_big_nohaplotig	exon	65005903	65006058	100	-	.	Parent=FBgn0031710.1.mrna1;Target=FBgn0031710.1 997 1152 +
ChrX	stalkie_big_nohaplotig	exon	65006117	65006332	100	-	.	Parent=FBgn0031710.1.mrna1;Target=FBgn0031710.1 781 996 +
ChrX	stalkie_big_nohaplotig	exon	65006396	65007144	100	-	.	Parent=FBgn0031710.1.mrna1;Target=FBgn0031710.1 32 780 +
ChrX	stalkie_big_nohaplotig	exon	65007215	65007245	100	-	.	Parent=FBgn0031710.1.mrna1;Target=FBgn0031710.1 1 31 +
ChrX	stalkie_big_nohaplotig	CDS	65003879	65004505	.	-	0	Parent=FBgn0031710.1.mrna1;Target=FBgn0031710.1 1393 2019 +
ChrX	stalkie_big_nohaplotig	CDS	65004563	65004683	.	-	1	Parent=FBgn0031710.1.mrna1;Target=FBgn0031710.1 1272 1392 +
ChrX	stalkie_big_nohaplotig	CDS	65005717	65005835	.	-	0	Parent=FBgn0031710.1.mrna1;Target=FBgn0031710.1 1153 1271 +
ChrX	stalkie_big_nohaplotig	CDS	65005903	65006058	.	-	0	Parent=FBgn0031710.1.mrna1;Target=FBgn0031710.1 997 1152 +
ChrX	stalkie_big_nohaplotig	CDS	65006117	65006332	.	-	0	Parent=FBgn0031710.1.mrna1;Target=FBgn0031710.1 781 996 +
ChrX	stalkie_big_nohaplotig	CDS	65006396	65007144	.	-	2	Parent=FBgn0031710.1.mrna1;Target=FBgn0031710.1 32 780 +
ChrX	stalkie_big_nohaplotig	CDS	65007215	65007245	.	-	0	Parent=FBgn0031710.1.mrna1;Target=FBgn0031710.1 1 31 +
ChrX	gffcl	locus	65039472	65048334	.	-	.	ID=RLOC_00003722;geneIDs=FBgn0031384.1.path1;transcripts=FBgn0031384.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65039472	65048334	.	-	.	ID=FBgn0031384.1.mrna1;geneID=FBgn0031384.1.path1;Name=FBgn0031384.1;Dir=sensecoverage=91.7;identity=100.0;matches=2684;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003722
ChrX	stalkie_big_nohaplotig	exon	65039472	65039571	100	-	.	Parent=FBgn0031384.1.mrna1;Target=FBgn0031384.1 2829 2928 +
ChrX	stalkie_big_nohaplotig	exon	65041070	65041332	100	-	.	Parent=FBgn0031384.1.mrna1;Target=FBgn0031384.1 2566 2828 +
ChrX	stalkie_big_nohaplotig	exon	65041387	65041710	100	-	.	Parent=FBgn0031384.1.mrna1;Target=FBgn0031384.1 2242 2565 +
ChrX	stalkie_big_nohaplotig	exon	65041765	65042054	100	-	.	Parent=FBgn0031384.1.mrna1;Target=FBgn0031384.1 1952 2241 +
ChrX	stalkie_big_nohaplotig	exon	65042115	65042532	100	-	.	Parent=FBgn0031384.1.mrna1;Target=FBgn0031384.1 1534 1951 +
ChrX	stalkie_big_nohaplotig	exon	65042612	65042751	100	-	.	Parent=FBgn0031384.1.mrna1;Target=FBgn0031384.1 1394 1533 +
ChrX	stalkie_big_nohaplotig	exon	65045344	65045542	100	-	.	Parent=FBgn0031384.1.mrna1;Target=FBgn0031384.1 1195 1393 +
ChrX	stalkie_big_nohaplotig	exon	65047318	65047623	100	-	.	Parent=FBgn0031384.1.mrna1;Target=FBgn0031384.1 889 1194 +
ChrX	stalkie_big_nohaplotig	exon	65047691	65048334	100	-	.	Parent=FBgn0031384.1.mrna1;Target=FBgn0031384.1 245 888 +
ChrX	stalkie_big_nohaplotig	CDS	65039472	65039571	.	-	1	Parent=FBgn0031384.1.mrna1;Target=FBgn0031384.1 2829 2928 +
ChrX	stalkie_big_nohaplotig	CDS	65041070	65041332	.	-	0	Parent=FBgn0031384.1.mrna1;Target=FBgn0031384.1 2566 2828 +
ChrX	stalkie_big_nohaplotig	CDS	65041387	65041710	.	-	0	Parent=FBgn0031384.1.mrna1;Target=FBgn0031384.1 2242 2565 +
ChrX	stalkie_big_nohaplotig	CDS	65041765	65042054	.	-	2	Parent=FBgn0031384.1.mrna1;Target=FBgn0031384.1 1952 2241 +
ChrX	stalkie_big_nohaplotig	CDS	65042115	65042532	.	-	0	Parent=FBgn0031384.1.mrna1;Target=FBgn0031384.1 1534 1951 +
ChrX	stalkie_big_nohaplotig	CDS	65042612	65042751	.	-	2	Parent=FBgn0031384.1.mrna1;Target=FBgn0031384.1 1394 1533 +
ChrX	stalkie_big_nohaplotig	CDS	65045344	65045542	.	-	0	Parent=FBgn0031384.1.mrna1;Target=FBgn0031384.1 1195 1393 +
ChrX	stalkie_big_nohaplotig	CDS	65047318	65047623	.	-	0	Parent=FBgn0031384.1.mrna1;Target=FBgn0031384.1 889 1194 +
ChrX	stalkie_big_nohaplotig	CDS	65047691	65048332	.	-	0	Parent=FBgn0031384.1.mrna1;Target=FBgn0031384.1 247 888 +
ChrX	gffcl	locus	65052644	65053670	.	+	.	ID=RLOC_00003723;geneIDs=ORF2042.path1;transcripts=ORF2042.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65052644	65053670	.	+	.	ID=ORF2042.mrna1;geneID=ORF2042.path1;Name=ORF2042;Dir=sensecoverage=100.0;identity=100.0;matches=930;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003723
ChrX	stalkie_big_nohaplotig	exon	65052644	65052681	100	+	.	Parent=ORF2042.mrna1;Target=ORF2042 1 38 +
ChrX	stalkie_big_nohaplotig	exon	65052779	65053670	100	+	.	Parent=ORF2042.mrna1;Target=ORF2042 39 930 +
ChrX	stalkie_big_nohaplotig	CDS	65052644	65052681	.	+	0	Parent=ORF2042.mrna1;Target=ORF2042 1 38 +
ChrX	stalkie_big_nohaplotig	CDS	65052779	65053670	.	+	1	Parent=ORF2042.mrna1;Target=ORF2042 39 930 +
ChrX	gffcl	locus	65073791	65084653	.	+	.	ID=RLOC_00003724;geneIDs=FBgn0031627.1.path1;transcripts=FBgn0031627.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65073791	65084653	.	+	.	ID=FBgn0031627.1.mrna1;geneID=FBgn0031627.1.path1;Name=FBgn0031627.1;Dir=sensecoverage=100.0;identity=100.0;matches=1365;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003724
ChrX	stalkie_big_nohaplotig	exon	65073791	65073848	100	+	.	Parent=FBgn0031627.1.mrna1;Target=FBgn0031627.1 1 58 +
ChrX	stalkie_big_nohaplotig	exon	65078243	65078437	100	+	.	Parent=FBgn0031627.1.mrna1;Target=FBgn0031627.1 59 253 +
ChrX	stalkie_big_nohaplotig	exon	65078532	65078642	100	+	.	Parent=FBgn0031627.1.mrna1;Target=FBgn0031627.1 254 364 +
ChrX	stalkie_big_nohaplotig	exon	65078739	65078876	100	+	.	Parent=FBgn0031627.1.mrna1;Target=FBgn0031627.1 365 502 +
ChrX	stalkie_big_nohaplotig	exon	65078953	65079102	100	+	.	Parent=FBgn0031627.1.mrna1;Target=FBgn0031627.1 503 652 +
ChrX	stalkie_big_nohaplotig	exon	65082600	65083088	100	+	.	Parent=FBgn0031627.1.mrna1;Target=FBgn0031627.1 653 1141 +
ChrX	stalkie_big_nohaplotig	exon	65084430	65084653	100	+	.	Parent=FBgn0031627.1.mrna1;Target=FBgn0031627.1 1142 1365 +
ChrX	stalkie_big_nohaplotig	CDS	65073791	65073848	.	+	0	Parent=FBgn0031627.1.mrna1;Target=FBgn0031627.1 1 58 +
ChrX	stalkie_big_nohaplotig	CDS	65078243	65078437	.	+	2	Parent=FBgn0031627.1.mrna1;Target=FBgn0031627.1 59 253 +
ChrX	stalkie_big_nohaplotig	CDS	65078532	65078642	.	+	2	Parent=FBgn0031627.1.mrna1;Target=FBgn0031627.1 254 364 +
ChrX	stalkie_big_nohaplotig	CDS	65078739	65078876	.	+	2	Parent=FBgn0031627.1.mrna1;Target=FBgn0031627.1 365 502 +
ChrX	stalkie_big_nohaplotig	CDS	65078953	65079102	.	+	2	Parent=FBgn0031627.1.mrna1;Target=FBgn0031627.1 503 652 +
ChrX	stalkie_big_nohaplotig	CDS	65082600	65083088	.	+	2	Parent=FBgn0031627.1.mrna1;Target=FBgn0031627.1 653 1141 +
ChrX	stalkie_big_nohaplotig	CDS	65084430	65084653	.	+	2	Parent=FBgn0031627.1.mrna1;Target=FBgn0031627.1 1142 1365 +
ChrX	gffcl	locus	65079130	65079502	.	+	.	ID=RLOC_00003725;geneIDs=comp135540_c0_seq1.path1;transcripts=comp135540_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65079130	65079502	.	+	.	ID=comp135540_c0_seq1.mrna1;geneID=comp135540_c0_seq1.path1;Name=comp135540_c0_seq1;Dir=indeterminatecoverage=97.4;identity=100.0;matches=373;mismatches=0;indels=0;unknowns=0;Target=comp135540_c0_seq1 382 10 .;CDS_Target=comp135540_c0_seq1 118 56 .;locus=RLOC_00003725
ChrX	stalkie_big_nohaplotig	exon	65079130	65079502	100	+	.	Parent=comp135540_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65079176	65079238	.	+	0	Parent=comp135540_c0_seq1.mrna1
ChrX	gffcl	locus	65079665	65080240	.	-	.	ID=RLOC_00003726;geneIDs=comp149888_c0_seq1.path1;transcripts=comp149888_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65079665	65080240	.	-	.	ID=comp149888_c0_seq1.mrna1;geneID=comp149888_c0_seq1.path1;Name=comp149888_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=576;mismatches=0;indels=0;unknowns=0;Target=comp149888_c0_seq1 576 1 .;CDS_Target=comp149888_c0_seq1 68 3 .;locus=RLOC_00003726
ChrX	stalkie_big_nohaplotig	exon	65079665	65080240	100	-	.	Parent=comp149888_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65080173	65080238	.	-	0	Parent=comp149888_c0_seq1.mrna1
ChrX	gffcl	locus	65081409	65081853	.	+	.	ID=RLOC_00003727;geneIDs=comp143366_c0_seq1.path1;transcripts=comp143366_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65081409	65081853	.	+	.	ID=comp143366_c0_seq1.mrna1;geneID=comp143366_c0_seq1.path1;Name=comp143366_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.6;matches=443;mismatches=2;indels=0;unknowns=0;Target=comp143366_c0_seq1 445 1 .;CDS_Target=comp143366_c0_seq1 125 3 .;locus=RLOC_00003727
ChrX	stalkie_big_nohaplotig	exon	65081409	65081853	99	+	.	Parent=comp143366_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65081411	65081533	.	+	0	Parent=comp143366_c0_seq1.mrna1
ChrX	gffcl	locus	65085532	65089311	.	-	.	ID=RLOC_00003728;geneIDs=comp143704_c0_seq1.path1,comp160840_c0_seq1.path1;transcripts=comp160840_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65085532	65088670	.	-	.	ID=comp160840_c0_seq1.mrna1;geneID=comp160840_c0_seq1.path1;Name=comp160840_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=3137;mismatches=2;indels=1;unknowns=0;Target=comp160840_c0_seq1 3140 1 .;CDS_Target=comp160840_c0_seq1 2179 1940 .;locus=RLOC_00003728
ChrX	stalkie_big_nohaplotig	exon	65085532	65088670	99	-	.	Parent=comp160840_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65086493	65086732	.	-	0	Parent=comp160840_c0_seq1.mrna1
ChrX	gffcl	locus	65092110	65457092	.	+	.	ID=RLOC_00003729;geneIDs=comp153173_c0_seq1.path1;transcripts=comp153173_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65092110	65457092	.	+	.	ID=comp153173_c0_seq1.mrna1;geneID=comp153173_c0_seq1.path1;Name=comp153173_c0_seq1;Dir=sensecoverage=81.9;identity=98.5;matches=520;mismatches=8;indels=0;unknowns=0;Target=comp153173_c0_seq1 332 483 +;locus=RLOC_00003729
ChrX	stalkie_big_nohaplotig	exon	65092110	65092326	98	+	.	Parent=comp153173_c0_seq1.mrna1;Target=comp153173_c0_seq1 1 217 +
ChrX	stalkie_big_nohaplotig	exon	65092389	65092654	98	+	.	Parent=comp153173_c0_seq1.mrna1;Target=comp153173_c0_seq1 218 483 +
ChrX	stalkie_big_nohaplotig	exon	65435410	65435418	100	+	.	Parent=comp153173_c0_seq1.mrna1;Target=comp153173_c0_seq1 517 525 +
ChrX	stalkie_big_nohaplotig	exon	65437873	65437874	100	+	.	Parent=comp153173_c0_seq1.mrna1;Target=comp153173_c0_seq1 526 527 +
ChrX	stalkie_big_nohaplotig	exon	65441247	65441253	100	+	.	Parent=comp153173_c0_seq1.mrna1;Target=comp153173_c0_seq1 528 534 +
ChrX	stalkie_big_nohaplotig	exon	65453617	65453625	100	+	.	Parent=comp153173_c0_seq1.mrna1;Target=comp153173_c0_seq1 535 543 +
ChrX	stalkie_big_nohaplotig	exon	65457075	65457092	94	+	.	Parent=comp153173_c0_seq1.mrna1;Target=comp153173_c0_seq1 547 564 +
ChrX	stalkie_big_nohaplotig	CDS	65092503	65092654	.	+	0	Parent=comp153173_c0_seq1.mrna1
ChrX	gffcl	locus	65100654	65125702	.	-	.	ID=RLOC_00003731;geneIDs=FBgn0031589.1.path1;transcripts=FBgn0031589.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65100654	65125702	.	-	.	ID=FBgn0031589.1.mrna1;geneID=FBgn0031589.1.path1;Name=FBgn0031589.1;Dir=sensecoverage=100.0;identity=100.0;matches=2163;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003731
ChrX	stalkie_big_nohaplotig	exon	65100654	65100728	100	-	.	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 2089 2163 +
ChrX	stalkie_big_nohaplotig	exon	65100792	65101074	100	-	.	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 1806 2088 +
ChrX	stalkie_big_nohaplotig	exon	65101143	65101269	100	-	.	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 1679 1805 +
ChrX	stalkie_big_nohaplotig	exon	65104363	65104628	100	-	.	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 1413 1678 +
ChrX	stalkie_big_nohaplotig	exon	65114106	65114594	100	-	.	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 924 1412 +
ChrX	stalkie_big_nohaplotig	exon	65114966	65115137	100	-	.	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 752 923 +
ChrX	stalkie_big_nohaplotig	exon	65115192	65115332	100	-	.	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 611 751 +
ChrX	stalkie_big_nohaplotig	exon	65118507	65118634	100	-	.	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 483 610 +
ChrX	stalkie_big_nohaplotig	exon	65119615	65119698	100	-	.	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 399 482 +
ChrX	stalkie_big_nohaplotig	exon	65119765	65119891	100	-	.	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 272 398 +
ChrX	stalkie_big_nohaplotig	exon	65119956	65120126	100	-	.	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 101 271 +
ChrX	stalkie_big_nohaplotig	exon	65125603	65125702	100	-	.	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 1 100 +
ChrX	stalkie_big_nohaplotig	CDS	65100654	65100728	.	-	0	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 2089 2163 +
ChrX	stalkie_big_nohaplotig	CDS	65100792	65101074	.	-	1	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 1806 2088 +
ChrX	stalkie_big_nohaplotig	CDS	65101143	65101269	.	-	2	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 1679 1805 +
ChrX	stalkie_big_nohaplotig	CDS	65104363	65104628	.	-	1	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 1413 1678 +
ChrX	stalkie_big_nohaplotig	CDS	65114106	65114594	.	-	1	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 924 1412 +
ChrX	stalkie_big_nohaplotig	CDS	65114966	65115137	.	-	2	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 752 923 +
ChrX	stalkie_big_nohaplotig	CDS	65115192	65115332	.	-	2	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 611 751 +
ChrX	stalkie_big_nohaplotig	CDS	65118507	65118634	.	-	1	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 483 610 +
ChrX	stalkie_big_nohaplotig	CDS	65119615	65119698	.	-	1	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 399 482 +
ChrX	stalkie_big_nohaplotig	CDS	65119765	65119891	.	-	2	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 272 398 +
ChrX	stalkie_big_nohaplotig	CDS	65119956	65120126	.	-	2	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 101 271 +
ChrX	stalkie_big_nohaplotig	CDS	65125603	65125702	.	-	0	Parent=FBgn0031589.1.mrna1;Target=FBgn0031589.1 1 100 +
ChrX	gffcl	locus	65101419	65102150	.	+	.	ID=RLOC_00003732;geneIDs=comp143906_c0_seq1.path1;transcripts=comp143906_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65101419	65102150	.	+	.	ID=comp143906_c0_seq1.mrna1;geneID=comp143906_c0_seq1.path1;Name=comp143906_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=732;mismatches=0;indels=0;unknowns=0;Target=comp143906_c0_seq1 732 1 .;CDS_Target=comp143906_c0_seq1 181 2 .;locus=RLOC_00003732
ChrX	stalkie_big_nohaplotig	exon	65101419	65102150	100	+	.	Parent=comp143906_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65101420	65101599	.	+	0	Parent=comp143906_c0_seq1.mrna1
ChrX	gffcl	locus	65107597	65109311	.	+	.	ID=RLOC_00003733;geneIDs=comp155267_c0_seq1.path1;transcripts=comp155267_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65107597	65109311	.	+	.	ID=comp155267_c0_seq1.mrna1;geneID=comp155267_c0_seq1.path1;Name=comp155267_c0_seq1;Dir=antisensecoverage=99.4;identity=99.6;matches=1691;mismatches=5;indels=1;unknowns=0;Target=comp155267_c0_seq1 88 225 .;locus=RLOC_00003733
ChrX	stalkie_big_nohaplotig	exon	65107597	65108275	99	+	.	Parent=comp155267_c0_seq1.mrna1;Target=comp155267_c0_seq1 1029 1708 -
ChrX	stalkie_big_nohaplotig	exon	65108295	65109311	99	+	.	Parent=comp155267_c0_seq1.mrna1;Target=comp155267_c0_seq1 12 1028 -
ChrX	stalkie_big_nohaplotig	CDS	65109098	65109235	.	+	0	Parent=comp155267_c0_seq1.mrna1
ChrX	gffcl	locus	65129091	65130048	.	-	.	ID=RLOC_00003734;geneIDs=comp68827_c0_seq1.path1;transcripts=comp68827_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65129091	65130048	.	-	.	ID=comp68827_c0_seq1.mrna1;geneID=comp68827_c0_seq1.path1;Name=comp68827_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=958;mismatches=0;indels=0;unknowns=0;Target=comp68827_c0_seq1 958 1 .;CDS_Target=comp68827_c0_seq1 204 97 .;locus=RLOC_00003734
ChrX	stalkie_big_nohaplotig	exon	65129091	65130048	100	-	.	Parent=comp68827_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65129845	65129952	.	-	0	Parent=comp68827_c0_seq1.mrna1
ChrX	gffcl	locus	65136038	65137476	.	-	.	ID=RLOC_00003735;geneIDs=FBgn0031228.1.path1,comp145459_c0_seq1.path1;transcripts=FBgn0031228.1.mrna1,comp145459_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65136038	65136400	.	-	.	ID=FBgn0031228.1.mrna1;geneID=FBgn0031228.1.path1;Name=FBgn0031228.1;Dir=sensecoverage=98.7;identity=100.0;matches=308;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003735
ChrX	stalkie_big_nohaplotig	exon	65136038	65136127	100	-	.	Parent=FBgn0031228.1.mrna1;Target=FBgn0031228.1 223 312 +
ChrX	stalkie_big_nohaplotig	exon	65136183	65136400	100	-	.	Parent=FBgn0031228.1.mrna1;Target=FBgn0031228.1 5 222 +
ChrX	stalkie_big_nohaplotig	CDS	65136038	65136127	.	-	0	Parent=FBgn0031228.1.mrna1;Target=FBgn0031228.1 223 312 +
ChrX	stalkie_big_nohaplotig	CDS	65136183	65136398	.	-	0	Parent=FBgn0031228.1.mrna1;Target=FBgn0031228.1 7 222 +
ChrX	stalkie_big_nohaplotig	mRNA	65136378	65137476	.	-	.	ID=comp145459_c0_seq1.mrna1;geneID=comp145459_c0_seq1.path1;Name=comp145459_c0_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=591;mismatches=4;indels=0;unknowns=0;Target=comp145459_c0_seq1 283 408 .;locus=RLOC_00003735
ChrX	stalkie_big_nohaplotig	exon	65136378	65136400	100	-	.	Parent=comp145459_c0_seq1.mrna1;Target=comp145459_c0_seq1 1 23 -
ChrX	stalkie_big_nohaplotig	exon	65136905	65137476	99	-	.	Parent=comp145459_c0_seq1.mrna1;Target=comp145459_c0_seq1 24 595 -
ChrX	stalkie_big_nohaplotig	CDS	65137164	65137289	.	-	0	Parent=comp145459_c0_seq1.mrna1
ChrX	gffcl	locus	65141132	65142718	.	+	.	ID=RLOC_00003736;geneIDs=FBgn0031227.1.path1;transcripts=FBgn0031227.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65141132	65142718	.	+	.	ID=FBgn0031227.1.mrna1;geneID=FBgn0031227.1.path1;Name=FBgn0031227.1;Dir=sensecoverage=100.0;identity=100.0;matches=1479;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003736
ChrX	stalkie_big_nohaplotig	exon	65141132	65141257	100	+	.	Parent=FBgn0031227.1.mrna1;Target=FBgn0031227.1 1 126 +
ChrX	stalkie_big_nohaplotig	exon	65141315	65142048	100	+	.	Parent=FBgn0031227.1.mrna1;Target=FBgn0031227.1 127 860 +
ChrX	stalkie_big_nohaplotig	exon	65142100	65142718	100	+	.	Parent=FBgn0031227.1.mrna1;Target=FBgn0031227.1 861 1479 +
ChrX	stalkie_big_nohaplotig	CDS	65141132	65141257	.	+	0	Parent=FBgn0031227.1.mrna1;Target=FBgn0031227.1 1 126 +
ChrX	stalkie_big_nohaplotig	CDS	65141315	65142048	.	+	0	Parent=FBgn0031227.1.mrna1;Target=FBgn0031227.1 127 860 +
ChrX	stalkie_big_nohaplotig	CDS	65142100	65142718	.	+	1	Parent=FBgn0031227.1.mrna1;Target=FBgn0031227.1 861 1479 +
ChrX	gffcl	locus	65142786	65143611	.	-	.	ID=RLOC_00003737;geneIDs=FBgn0032596.1.path1;transcripts=FBgn0032596.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65142786	65143611	.	-	.	ID=FBgn0032596.1.mrna1;geneID=FBgn0032596.1.path1;Name=FBgn0032596.1;Dir=sensecoverage=100.0;identity=100.0;matches=693;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003737
ChrX	stalkie_big_nohaplotig	exon	65142786	65143086	100	-	.	Parent=FBgn0032596.1.mrna1;Target=FBgn0032596.1 393 693 +
ChrX	stalkie_big_nohaplotig	exon	65143142	65143367	100	-	.	Parent=FBgn0032596.1.mrna1;Target=FBgn0032596.1 167 392 +
ChrX	stalkie_big_nohaplotig	exon	65143446	65143611	100	-	.	Parent=FBgn0032596.1.mrna1;Target=FBgn0032596.1 1 166 +
ChrX	stalkie_big_nohaplotig	CDS	65142786	65143086	.	-	1	Parent=FBgn0032596.1.mrna1;Target=FBgn0032596.1 393 693 +
ChrX	stalkie_big_nohaplotig	CDS	65143142	65143367	.	-	2	Parent=FBgn0032596.1.mrna1;Target=FBgn0032596.1 167 392 +
ChrX	stalkie_big_nohaplotig	CDS	65143446	65143611	.	-	0	Parent=FBgn0032596.1.mrna1;Target=FBgn0032596.1 1 166 +
ChrX	gffcl	locus	65149599	65150703	.	+	.	ID=RLOC_00003738;geneIDs=FBgn0031607.2.path1;transcripts=FBgn0031607.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65149599	65150703	.	+	.	ID=FBgn0031607.2.mrna1;geneID=FBgn0031607.2.path1;Name=FBgn0031607.2;Dir=sensecoverage=100.0;identity=100.0;matches=1050;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003738
ChrX	stalkie_big_nohaplotig	exon	65149599	65149667	100	+	.	Parent=FBgn0031607.2.mrna1;Target=FBgn0031607.2 1 69 +
ChrX	stalkie_big_nohaplotig	exon	65149723	65150703	100	+	.	Parent=FBgn0031607.2.mrna1;Target=FBgn0031607.2 70 1050 +
ChrX	stalkie_big_nohaplotig	CDS	65149599	65149667	.	+	0	Parent=FBgn0031607.2.mrna1;Target=FBgn0031607.2 1 69 +
ChrX	stalkie_big_nohaplotig	CDS	65149723	65150703	.	+	0	Parent=FBgn0031607.2.mrna1;Target=FBgn0031607.2 70 1050 +
ChrX	gffcl	locus	65153427	65153836	.	+	.	ID=RLOC_00003739;geneIDs=comp65559_c0_seq1.path1;transcripts=comp65559_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65153427	65153836	.	+	.	ID=comp65559_c0_seq1.mrna1;geneID=comp65559_c0_seq1.path1;Name=comp65559_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=410;mismatches=0;indels=1;unknowns=0;Target=comp65559_c0_seq1 412 2 .;CDS_Target=comp65559_c0_seq1 410 321 .;locus=RLOC_00003739
ChrX	stalkie_big_nohaplotig	exon	65153427	65153836	99	+	.	Parent=comp65559_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65153745	65153834	.	+	0	Parent=comp65559_c0_seq1.mrna1
ChrX	gffcl	locus	65154045	65155631	.	-	.	ID=RLOC_00003740;geneIDs=FBgn0031260.1.path1;transcripts=FBgn0031260.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65154045	65155631	.	-	.	ID=FBgn0031260.1.mrna1;geneID=FBgn0031260.1.path1;Name=FBgn0031260.1;Dir=sensecoverage=100.0;identity=100.0;matches=1242;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003740
ChrX	stalkie_big_nohaplotig	exon	65154045	65154177	100	-	.	Parent=FBgn0031260.1.mrna1;Target=FBgn0031260.1 1110 1242 +
ChrX	stalkie_big_nohaplotig	exon	65154235	65155085	100	-	.	Parent=FBgn0031260.1.mrna1;Target=FBgn0031260.1 259 1109 +
ChrX	stalkie_big_nohaplotig	exon	65155374	65155631	100	-	.	Parent=FBgn0031260.1.mrna1;Target=FBgn0031260.1 1 258 +
ChrX	stalkie_big_nohaplotig	CDS	65154045	65154177	.	-	1	Parent=FBgn0031260.1.mrna1;Target=FBgn0031260.1 1110 1242 +
ChrX	stalkie_big_nohaplotig	CDS	65154235	65155085	.	-	0	Parent=FBgn0031260.1.mrna1;Target=FBgn0031260.1 259 1109 +
ChrX	stalkie_big_nohaplotig	CDS	65155374	65155631	.	-	0	Parent=FBgn0031260.1.mrna1;Target=FBgn0031260.1 1 258 +
ChrX	gffcl	locus	65158326	65159702	.	-	.	ID=RLOC_00003741;geneIDs=FBgn0035593.2.path1;transcripts=FBgn0035593.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65158326	65159702	.	-	.	ID=FBgn0035593.2.mrna1;geneID=FBgn0035593.2.path1;Name=FBgn0035593.2;Dir=sensecoverage=100.0;identity=100.0;matches=1314;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003741
ChrX	stalkie_big_nohaplotig	exon	65158326	65158853	100	-	.	Parent=FBgn0035593.2.mrna1;Target=FBgn0035593.2 787 1314 +
ChrX	stalkie_big_nohaplotig	exon	65158917	65159702	100	-	.	Parent=FBgn0035593.2.mrna1;Target=FBgn0035593.2 1 786 +
ChrX	stalkie_big_nohaplotig	CDS	65158326	65158853	.	-	0	Parent=FBgn0035593.2.mrna1;Target=FBgn0035593.2 787 1314 +
ChrX	stalkie_big_nohaplotig	CDS	65158917	65159702	.	-	0	Parent=FBgn0035593.2.mrna1;Target=FBgn0035593.2 1 786 +
ChrX	gffcl	locus	65162387	65166880	.	-	.	ID=RLOC_00003742;geneIDs=FBgn0035593.4.path1;transcripts=FBgn0035593.4.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65162387	65166880	.	-	.	ID=FBgn0035593.4.mrna1;geneID=FBgn0035593.4.path1;Name=FBgn0035593.4;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1454;mismatches=4;indels=0;unknowns=0;locus=RLOC_00003742
ChrX	stalkie_big_nohaplotig	exon	65162387	65162600	100	-	.	Parent=FBgn0035593.4.mrna1;Target=FBgn0035593.4 1458 1245 .
ChrX	stalkie_big_nohaplotig	exon	65162973	65163005	100	-	.	Parent=FBgn0035593.4.mrna1;Target=FBgn0035593.4 1244 1212 .
ChrX	stalkie_big_nohaplotig	exon	65163192	65163583	98	-	.	Parent=FBgn0035593.4.mrna1;Target=FBgn0035593.4 1211 820 .
ChrX	stalkie_big_nohaplotig	exon	65166062	65166880	100	-	.	Parent=FBgn0035593.4.mrna1;Target=FBgn0035593.4 819 1 .
ChrX	stalkie_big_nohaplotig	CDS	65162387	65162600	.	-	1	Parent=FBgn0035593.4.mrna1;Target=FBgn0035593.4 1458 1245 .
ChrX	stalkie_big_nohaplotig	CDS	65162973	65163005	.	-	1	Parent=FBgn0035593.4.mrna1;Target=FBgn0035593.4 1244 1212 .
ChrX	stalkie_big_nohaplotig	CDS	65163192	65163583	.	-	0	Parent=FBgn0035593.4.mrna1;Target=FBgn0035593.4 1211 820 .
ChrX	stalkie_big_nohaplotig	CDS	65166062	65166880	.	-	0	Parent=FBgn0035593.4.mrna1;Target=FBgn0035593.4 819 1 .
ChrX	gffcl	locus	65169811	65171316	.	-	.	ID=RLOC_00003743;geneIDs=FBgn0264443.1.path1;transcripts=FBgn0264443.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65169811	65171316	.	-	.	ID=FBgn0264443.1.mrna1;geneID=FBgn0264443.1.path1;Name=FBgn0264443.1;Dir=sensecoverage=100.0;identity=99.8;matches=1443;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003743
ChrX	stalkie_big_nohaplotig	exon	65169811	65170872	99	-	.	Parent=FBgn0264443.1.mrna1;Target=FBgn0264443.1 385 1446 +
ChrX	stalkie_big_nohaplotig	exon	65170933	65171316	100	-	.	Parent=FBgn0264443.1.mrna1;Target=FBgn0264443.1 1 384 +
ChrX	stalkie_big_nohaplotig	CDS	65169811	65170872	.	-	0	Parent=FBgn0264443.1.mrna1;Target=FBgn0264443.1 385 1446 +
ChrX	stalkie_big_nohaplotig	CDS	65170933	65171316	.	-	0	Parent=FBgn0264443.1.mrna1;Target=FBgn0264443.1 1 384 +
ChrX	gffcl	locus	65190967	65191572	.	-	.	ID=RLOC_00003744;geneIDs=comp147559_c0_seq1.path1;transcripts=comp147559_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65190967	65191572	.	-	.	ID=comp147559_c0_seq1.mrna1;geneID=comp147559_c0_seq1.path1;Name=comp147559_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=606;mismatches=0;indels=0;unknowns=0;Target=comp147559_c0_seq1 606 1 .;CDS_Target=comp147559_c0_seq1 120 1 .;locus=RLOC_00003744
ChrX	stalkie_big_nohaplotig	exon	65190967	65191572	100	-	.	Parent=comp147559_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65191453	65191572	.	-	0	Parent=comp147559_c0_seq1.mrna1
ChrX	gffcl	locus	65193207	65193675	.	-	.	ID=RLOC_00003745;geneIDs=comp1592029_c0_seq1.path1;transcripts=comp1592029_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65193207	65193675	.	-	.	ID=comp1592029_c0_seq1.mrna1;geneID=comp1592029_c0_seq1.path1;Name=comp1592029_c0_seq1;Dir=indeterminatecoverage=92.9;identity=99.1;matches=465;mismatches=4;indels=0;unknowns=0;Target=comp1592029_c0_seq1 505 37 .;CDS_Target=comp1592029_c0_seq1 491 441 .;locus=RLOC_00003745
ChrX	stalkie_big_nohaplotig	exon	65193207	65193675	99	-	.	Parent=comp1592029_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65193221	65193271	.	-	0	Parent=comp1592029_c0_seq1.mrna1
ChrX	gffcl	locus	65194133	65194881	.	+	.	ID=RLOC_00003746;geneIDs=comp147662_c0_seq1.path1;transcripts=comp147662_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65194133	65194881	.	+	.	ID=comp147662_c0_seq1.mrna1;geneID=comp147662_c0_seq1.path1;Name=comp147662_c0_seq1;Dir=indeterminatecoverage=94.9;identity=100.0;matches=749;mismatches=0;indels=0;unknowns=0;Target=comp147662_c0_seq1 749 1 .;CDS_Target=comp147662_c0_seq1 662 603 .;locus=RLOC_00003746
ChrX	stalkie_big_nohaplotig	exon	65194133	65194881	100	+	.	Parent=comp147662_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65194735	65194794	.	+	0	Parent=comp147662_c0_seq1.mrna1
ChrX	gffcl	locus	65195050	65214041	.	-	.	ID=RLOC_00003747;geneIDs=FBgn0051637.1.path1;transcripts=FBgn0051637.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65195050	65214041	.	-	.	ID=FBgn0051637.1.mrna1;geneID=FBgn0051637.1.path1;Name=FBgn0051637.1;Dir=sensecoverage=100.0;identity=100.0;matches=1473;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003747
ChrX	stalkie_big_nohaplotig	exon	65195050	65195169	100	-	.	Parent=FBgn0051637.1.mrna1;Target=FBgn0051637.1 1354 1473 +
ChrX	stalkie_big_nohaplotig	exon	65195598	65195799	100	-	.	Parent=FBgn0051637.1.mrna1;Target=FBgn0051637.1 1152 1353 +
ChrX	stalkie_big_nohaplotig	exon	65195858	65196037	100	-	.	Parent=FBgn0051637.1.mrna1;Target=FBgn0051637.1 972 1151 +
ChrX	stalkie_big_nohaplotig	exon	65213071	65214041	100	-	.	Parent=FBgn0051637.1.mrna1;Target=FBgn0051637.1 1 971 +
ChrX	stalkie_big_nohaplotig	CDS	65195050	65195169	.	-	0	Parent=FBgn0051637.1.mrna1;Target=FBgn0051637.1 1354 1473 +
ChrX	stalkie_big_nohaplotig	CDS	65195598	65195799	.	-	1	Parent=FBgn0051637.1.mrna1;Target=FBgn0051637.1 1152 1353 +
ChrX	stalkie_big_nohaplotig	CDS	65195858	65196037	.	-	1	Parent=FBgn0051637.1.mrna1;Target=FBgn0051637.1 972 1151 +
ChrX	stalkie_big_nohaplotig	CDS	65213071	65214041	.	-	0	Parent=FBgn0051637.1.mrna1;Target=FBgn0051637.1 1 971 +
ChrX	gffcl	locus	65221123	65221468	.	+	.	ID=RLOC_00003748;geneIDs=comp135493_c0_seq1.path1;transcripts=comp135493_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65221123	65221468	.	+	.	ID=comp135493_c0_seq1.mrna1;geneID=comp135493_c0_seq1.path1;Name=comp135493_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=346;mismatches=0;indels=0;unknowns=0;Target=comp135493_c0_seq1 346 1 .;CDS_Target=comp135493_c0_seq1 74 3 .;locus=RLOC_00003748
ChrX	stalkie_big_nohaplotig	exon	65221123	65221468	100	+	.	Parent=comp135493_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65221125	65221196	.	+	0	Parent=comp135493_c0_seq1.mrna1
ChrX	gffcl	locus	65221690	65222707	.	-	.	ID=RLOC_00003749;geneIDs=comp145909_c0_seq1.path1;transcripts=comp145909_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65221690	65222707	.	-	.	ID=comp145909_c0_seq1.mrna1;geneID=comp145909_c0_seq1.path1;Name=comp145909_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1018;mismatches=0;indels=0;unknowns=0;Target=comp145909_c0_seq1 1018 1 .;CDS_Target=comp145909_c0_seq1 274 77 .;locus=RLOC_00003749
ChrX	stalkie_big_nohaplotig	exon	65221690	65222707	100	-	.	Parent=comp145909_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65222434	65222631	.	-	0	Parent=comp145909_c0_seq1.mrna1
ChrX	gffcl	locus	65223923	65237428	.	-	.	ID=RLOC_00003750;geneIDs=FBgn0031820.1.path1;transcripts=FBgn0031820.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65223923	65237428	.	-	.	ID=FBgn0031820.1.mrna1;geneID=FBgn0031820.1.path1;Name=FBgn0031820.1;Dir=sensecoverage=100.0;identity=100.0;matches=3186;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003750
ChrX	stalkie_big_nohaplotig	exon	65223923	65224482	100	-	.	Parent=FBgn0031820.1.mrna1;Target=FBgn0031820.1 2627 3186 +
ChrX	stalkie_big_nohaplotig	exon	65224551	65224654	100	-	.	Parent=FBgn0031820.1.mrna1;Target=FBgn0031820.1 2523 2626 +
ChrX	stalkie_big_nohaplotig	exon	65226083	65226263	100	-	.	Parent=FBgn0031820.1.mrna1;Target=FBgn0031820.1 2342 2522 +
ChrX	stalkie_big_nohaplotig	exon	65226327	65226555	100	-	.	Parent=FBgn0031820.1.mrna1;Target=FBgn0031820.1 2113 2341 +
ChrX	stalkie_big_nohaplotig	exon	65227480	65229546	100	-	.	Parent=FBgn0031820.1.mrna1;Target=FBgn0031820.1 46 2112 +
ChrX	stalkie_big_nohaplotig	exon	65237384	65237428	100	-	.	Parent=FBgn0031820.1.mrna1;Target=FBgn0031820.1 1 45 +
ChrX	stalkie_big_nohaplotig	CDS	65223923	65224482	.	-	2	Parent=FBgn0031820.1.mrna1;Target=FBgn0031820.1 2627 3186 +
ChrX	stalkie_big_nohaplotig	CDS	65224551	65224654	.	-	1	Parent=FBgn0031820.1.mrna1;Target=FBgn0031820.1 2523 2626 +
ChrX	stalkie_big_nohaplotig	CDS	65226083	65226263	.	-	2	Parent=FBgn0031820.1.mrna1;Target=FBgn0031820.1 2342 2522 +
ChrX	stalkie_big_nohaplotig	CDS	65226327	65226555	.	-	0	Parent=FBgn0031820.1.mrna1;Target=FBgn0031820.1 2113 2341 +
ChrX	stalkie_big_nohaplotig	CDS	65227480	65229546	.	-	0	Parent=FBgn0031820.1.mrna1;Target=FBgn0031820.1 46 2112 +
ChrX	stalkie_big_nohaplotig	CDS	65237384	65237428	.	-	0	Parent=FBgn0031820.1.mrna1;Target=FBgn0031820.1 1 45 +
ChrX	gffcl	locus	65243741	65245263	.	+	.	ID=RLOC_00003752;geneIDs=FBgn0031832.1.path1;transcripts=FBgn0031832.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65243741	65245263	.	+	.	ID=FBgn0031832.1.mrna1;geneID=FBgn0031832.1.path1;Name=FBgn0031832.1;Dir=sensecoverage=100.0;identity=100.0;matches=1464;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003752
ChrX	stalkie_big_nohaplotig	exon	65243741	65244809	100	+	.	Parent=FBgn0031832.1.mrna1;Target=FBgn0031832.1 1 1069 +
ChrX	stalkie_big_nohaplotig	exon	65244869	65245263	100	+	.	Parent=FBgn0031832.1.mrna1;Target=FBgn0031832.1 1070 1464 +
ChrX	stalkie_big_nohaplotig	CDS	65243741	65244809	.	+	0	Parent=FBgn0031832.1.mrna1;Target=FBgn0031832.1 1 1069 +
ChrX	stalkie_big_nohaplotig	CDS	65244869	65245263	.	+	2	Parent=FBgn0031832.1.mrna1;Target=FBgn0031832.1 1070 1464 +
ChrX	gffcl	locus	65245410	65246077	.	-	.	ID=RLOC_00003753;geneIDs=comp143157_c0_seq1.path1;transcripts=comp143157_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65245410	65246077	.	-	.	ID=comp143157_c0_seq1.mrna1;geneID=comp143157_c0_seq1.path1;Name=comp143157_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=668;mismatches=0;indels=0;unknowns=0;Target=comp143157_c0_seq1 668 1 .;CDS_Target=comp143157_c0_seq1 268 131 .;locus=RLOC_00003753
ChrX	stalkie_big_nohaplotig	exon	65245410	65246077	100	-	.	Parent=comp143157_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65245810	65245947	.	-	0	Parent=comp143157_c0_seq1.mrna1
ChrX	gffcl	locus	65247308	65248167	.	-	.	ID=RLOC_00003754;geneIDs=comp152982_c2_seq1.path1;transcripts=comp152982_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65247308	65248167	.	-	.	ID=comp152982_c2_seq1.mrna1;geneID=comp152982_c2_seq1.path1;Name=comp152982_c2_seq1;Dir=sensecoverage=100.0;identity=96.1;matches=610;mismatches=14;indels=11;unknowns=0;Target=comp152982_c2_seq1 154 234 +;locus=RLOC_00003754
ChrX	stalkie_big_nohaplotig	exon	65247308	65247447	97	-	.	Parent=comp152982_c2_seq1.mrna1;Target=comp152982_c2_seq1 486 625 +
ChrX	stalkie_big_nohaplotig	exon	65247500	65247723	93	-	.	Parent=comp152982_c2_seq1.mrna1;Target=comp152982_c2_seq1 272 485 +
ChrX	stalkie_big_nohaplotig	exon	65247898	65248167	97	-	.	Parent=comp152982_c2_seq1.mrna1;Target=comp152982_c2_seq1 1 271 +
ChrX	stalkie_big_nohaplotig	CDS	65247934	65248014	.	-	0	Parent=comp152982_c2_seq1.mrna1
ChrX	gffcl	locus	65249636	65253345	.	-	.	ID=RLOC_00003755;geneIDs=FBgn0031830.1.path1;transcripts=FBgn0031830.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65249636	65253345	.	-	.	ID=FBgn0031830.1.mrna1;geneID=FBgn0031830.1.path1;Name=FBgn0031830.1;Dir=sensecoverage=100.0;identity=100.0;matches=381;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003755
ChrX	stalkie_big_nohaplotig	exon	65249636	65249739	100	-	.	Parent=FBgn0031830.1.mrna1;Target=FBgn0031830.1 278 381 +
ChrX	stalkie_big_nohaplotig	exon	65249805	65249978	100	-	.	Parent=FBgn0031830.1.mrna1;Target=FBgn0031830.1 104 277 +
ChrX	stalkie_big_nohaplotig	exon	65253243	65253345	100	-	.	Parent=FBgn0031830.1.mrna1;Target=FBgn0031830.1 1 103 +
ChrX	stalkie_big_nohaplotig	CDS	65249636	65249739	.	-	2	Parent=FBgn0031830.1.mrna1;Target=FBgn0031830.1 278 381 +
ChrX	stalkie_big_nohaplotig	CDS	65249805	65249978	.	-	2	Parent=FBgn0031830.1.mrna1;Target=FBgn0031830.1 104 277 +
ChrX	stalkie_big_nohaplotig	CDS	65253243	65253345	.	-	0	Parent=FBgn0031830.1.mrna1;Target=FBgn0031830.1 1 103 +
ChrX	gffcl	locus	65258457	65262391	.	+	.	ID=RLOC_00003756;geneIDs=FBgn0031829.1.path1;transcripts=FBgn0031829.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65258457	65262391	.	+	.	ID=FBgn0031829.1.mrna1;geneID=FBgn0031829.1.path1;Name=FBgn0031829.1;Dir=sensecoverage=100.0;identity=99.8;matches=1323;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003756
ChrX	stalkie_big_nohaplotig	exon	65258457	65258587	100	+	.	Parent=FBgn0031829.1.mrna1;Target=FBgn0031829.1 1 131 +
ChrX	stalkie_big_nohaplotig	exon	65258646	65258748	100	+	.	Parent=FBgn0031829.1.mrna1;Target=FBgn0031829.1 132 234 +
ChrX	stalkie_big_nohaplotig	exon	65259615	65259729	100	+	.	Parent=FBgn0031829.1.mrna1;Target=FBgn0031829.1 235 349 +
ChrX	stalkie_big_nohaplotig	exon	65260793	65261229	99	+	.	Parent=FBgn0031829.1.mrna1;Target=FBgn0031829.1 350 786 +
ChrX	stalkie_big_nohaplotig	exon	65261325	65261573	100	+	.	Parent=FBgn0031829.1.mrna1;Target=FBgn0031829.1 787 1035 +
ChrX	stalkie_big_nohaplotig	exon	65262101	65262391	99	+	.	Parent=FBgn0031829.1.mrna1;Target=FBgn0031829.1 1036 1326 +
ChrX	stalkie_big_nohaplotig	CDS	65258457	65258587	.	+	0	Parent=FBgn0031829.1.mrna1;Target=FBgn0031829.1 1 131 +
ChrX	stalkie_big_nohaplotig	CDS	65258646	65258748	.	+	1	Parent=FBgn0031829.1.mrna1;Target=FBgn0031829.1 132 234 +
ChrX	stalkie_big_nohaplotig	CDS	65259615	65259729	.	+	0	Parent=FBgn0031829.1.mrna1;Target=FBgn0031829.1 235 349 +
ChrX	stalkie_big_nohaplotig	CDS	65260793	65261229	.	+	2	Parent=FBgn0031829.1.mrna1;Target=FBgn0031829.1 350 786 +
ChrX	stalkie_big_nohaplotig	CDS	65261325	65261573	.	+	0	Parent=FBgn0031829.1.mrna1;Target=FBgn0031829.1 787 1035 +
ChrX	stalkie_big_nohaplotig	CDS	65262101	65262391	.	+	0	Parent=FBgn0031829.1.mrna1;Target=FBgn0031829.1 1036 1326 +
ChrX	gffcl	locus	65347993	65348748	.	+	.	ID=RLOC_00003757;geneIDs=FBgn0031188.1.path1;transcripts=FBgn0031188.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65347993	65348748	.	+	.	ID=FBgn0031188.1.mrna1;geneID=FBgn0031188.1.path1;Name=FBgn0031188.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=756;mismatches=0;indels=0;unknowns=0;Target=FBgn0031188.1 756 1 .;locus=RLOC_00003757
ChrX	stalkie_big_nohaplotig	exon	65347993	65348748	100	+	.	Parent=FBgn0031188.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65347993	65348748	.	+	0	Parent=FBgn0031188.1.mrna1
ChrX	gffcl	locus	65394171	65397200	.	+	.	ID=RLOC_00003759;geneIDs=FBgn0000320.1.path1;transcripts=FBgn0000320.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65394171	65397200	.	+	.	ID=FBgn0000320.1.mrna1;geneID=FBgn0000320.1.path1;Name=FBgn0000320.1;Dir=sensecoverage=99.7;identity=100.0;matches=2163;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003759
ChrX	stalkie_big_nohaplotig	exon	65394171	65395909	100	+	.	Parent=FBgn0000320.1.mrna1;Target=FBgn0000320.1 7 1745 +
ChrX	stalkie_big_nohaplotig	exon	65395985	65396229	100	+	.	Parent=FBgn0000320.1.mrna1;Target=FBgn0000320.1 1746 1990 +
ChrX	stalkie_big_nohaplotig	exon	65397022	65397200	100	+	.	Parent=FBgn0000320.1.mrna1;Target=FBgn0000320.1 1991 2169 +
ChrX	stalkie_big_nohaplotig	CDS	65394171	65395909	.	+	0	Parent=FBgn0000320.1.mrna1;Target=FBgn0000320.1 7 1745 +
ChrX	stalkie_big_nohaplotig	CDS	65395985	65396229	.	+	1	Parent=FBgn0000320.1.mrna1;Target=FBgn0000320.1 1746 1990 +
ChrX	stalkie_big_nohaplotig	CDS	65397022	65397200	.	+	2	Parent=FBgn0000320.1.mrna1;Target=FBgn0000320.1 1991 2169 +
ChrX	gffcl	locus	65397483	65397969	.	+	.	ID=RLOC_00003760;geneIDs=comp708290_c0_seq1.path1;transcripts=comp708290_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65397483	65397969	.	+	.	ID=comp708290_c0_seq1.mrna1;geneID=comp708290_c0_seq1.path1;Name=comp708290_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=487;mismatches=0;indels=0;unknowns=0;Target=comp708290_c0_seq1 487 1 .;CDS_Target=comp708290_c0_seq1 113 3 .;locus=RLOC_00003760
ChrX	stalkie_big_nohaplotig	exon	65397483	65397969	100	+	.	Parent=comp708290_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65397485	65397595	.	+	0	Parent=comp708290_c0_seq1.mrna1
ChrX	gffcl	locus	65405055	65406186	.	+	.	ID=RLOC_00003761;geneIDs=comp182170_c0_seq1.path1;transcripts=comp182170_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65405055	65406186	.	+	.	ID=comp182170_c0_seq1.mrna1;geneID=comp182170_c0_seq1.path1;Name=comp182170_c0_seq1;Dir=sensecoverage=95.3;identity=100.0;matches=583;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003761
ChrX	stalkie_big_nohaplotig	exon	65405055	65405231	100	+	.	Parent=comp182170_c0_seq1.mrna1;Target=comp182170_c0_seq1 8 184 +
ChrX	stalkie_big_nohaplotig	exon	65405288	65405525	100	+	.	Parent=comp182170_c0_seq1.mrna1;Target=comp182170_c0_seq1 185 422 +
ChrX	stalkie_big_nohaplotig	exon	65406019	65406186	100	+	.	Parent=comp182170_c0_seq1.mrna1;Target=comp182170_c0_seq1 423 590 +
ChrX	stalkie_big_nohaplotig	CDS	65405055	65405231	.	+	0	Parent=comp182170_c0_seq1.mrna1;Target=comp182170_c0_seq1 8 184 +
ChrX	stalkie_big_nohaplotig	CDS	65405288	65405407	.	+	0	Parent=comp182170_c0_seq1.mrna1;Target=comp182170_c0_seq1 185 304 +
ChrX	gffcl	locus	65412546	65417608	.	-	.	ID=RLOC_00003762;geneIDs=Dp_FBgn0246829.1.path1;transcripts=Dp_FBgn0246829.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65412546	65417608	.	-	.	ID=Dp_FBgn0246829.1.mrna1;geneID=Dp_FBgn0246829.1.path1;Name=Dp_FBgn0246829.1;Dir=sensecoverage=100.0;identity=100.0;matches=1074;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003762
ChrX	stalkie_big_nohaplotig	exon	65412546	65412718	100	-	.	Parent=Dp_FBgn0246829.1.mrna1;Target=Dp_FBgn0246829.1 902 1074 +
ChrX	stalkie_big_nohaplotig	exon	65412780	65413556	100	-	.	Parent=Dp_FBgn0246829.1.mrna1;Target=Dp_FBgn0246829.1 125 901 +
ChrX	stalkie_big_nohaplotig	exon	65417485	65417608	100	-	.	Parent=Dp_FBgn0246829.1.mrna1;Target=Dp_FBgn0246829.1 1 124 +
ChrX	stalkie_big_nohaplotig	CDS	65412546	65412718	.	-	2	Parent=Dp_FBgn0246829.1.mrna1;Target=Dp_FBgn0246829.1 902 1074 +
ChrX	stalkie_big_nohaplotig	CDS	65412780	65413556	.	-	2	Parent=Dp_FBgn0246829.1.mrna1;Target=Dp_FBgn0246829.1 125 901 +
ChrX	stalkie_big_nohaplotig	CDS	65417485	65417608	.	-	0	Parent=Dp_FBgn0246829.1.mrna1;Target=Dp_FBgn0246829.1 1 124 +
ChrX	gffcl	locus	65498220	65498862	.	-	.	ID=RLOC_00003763;geneIDs=comp145426_c0_seq1.path1;transcripts=comp145426_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65498220	65498862	.	-	.	ID=comp145426_c0_seq1.mrna1;geneID=comp145426_c0_seq1.path1;Name=comp145426_c0_seq1;Dir=sensecoverage=96.7;identity=100.0;matches=523;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003763
ChrX	stalkie_big_nohaplotig	exon	65498220	65498516	100	-	.	Parent=comp145426_c0_seq1.mrna1;Target=comp145426_c0_seq1 228 524 +
ChrX	stalkie_big_nohaplotig	exon	65498586	65498649	100	-	.	Parent=comp145426_c0_seq1.mrna1;Target=comp145426_c0_seq1 164 227 +
ChrX	stalkie_big_nohaplotig	exon	65498701	65498862	100	-	.	Parent=comp145426_c0_seq1.mrna1;Target=comp145426_c0_seq1 2 163 +
ChrX	stalkie_big_nohaplotig	CDS	65498394	65498516	.	-	0	Parent=comp145426_c0_seq1.mrna1;Target=comp145426_c0_seq1 228 350 +
ChrX	stalkie_big_nohaplotig	CDS	65498586	65498649	.	-	1	Parent=comp145426_c0_seq1.mrna1;Target=comp145426_c0_seq1 164 227 +
ChrX	stalkie_big_nohaplotig	CDS	65498701	65498768	.	-	0	Parent=comp145426_c0_seq1.mrna1;Target=comp145426_c0_seq1 96 163 +
ChrX	gffcl	locus	65503490	65505275	.	+	.	ID=RLOC_00003764;geneIDs=ORF603.path1;transcripts=ORF603.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65503490	65505275	.	+	.	ID=ORF603.mrna1;geneID=ORF603.path1;Name=ORF603;Dir=sensecoverage=100.0;identity=100.0;matches=1620;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003764
ChrX	stalkie_big_nohaplotig	exon	65503490	65504017	100	+	.	Parent=ORF603.mrna1;Target=ORF603 1 528 +
ChrX	stalkie_big_nohaplotig	exon	65504125	65504209	100	+	.	Parent=ORF603.mrna1;Target=ORF603 529 613 +
ChrX	stalkie_big_nohaplotig	exon	65504269	65505275	100	+	.	Parent=ORF603.mrna1;Target=ORF603 614 1620 +
ChrX	stalkie_big_nohaplotig	CDS	65503490	65504017	.	+	0	Parent=ORF603.mrna1;Target=ORF603 1 528 +
ChrX	stalkie_big_nohaplotig	CDS	65504125	65504209	.	+	0	Parent=ORF603.mrna1;Target=ORF603 529 613 +
ChrX	stalkie_big_nohaplotig	CDS	65504269	65505275	.	+	2	Parent=ORF603.mrna1;Target=ORF603 614 1620 +
ChrX	gffcl	locus	65588705	65590174	.	-	.	ID=RLOC_00003765;geneIDs=comp145830_c0_seq1.path1;transcripts=comp145830_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65588705	65590174	.	-	.	ID=comp145830_c0_seq1.mrna1;geneID=comp145830_c0_seq1.path1;Name=comp145830_c0_seq1;Dir=indeterminatecoverage=98.9;identity=100.0;matches=1470;mismatches=0;indels=0;unknowns=0;Target=comp145830_c0_seq1 1471 2 .;CDS_Target=comp145830_c0_seq1 1331 108 .;locus=RLOC_00003765
ChrX	stalkie_big_nohaplotig	exon	65588705	65590174	100	-	.	Parent=comp145830_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65588845	65590068	.	-	0	Parent=comp145830_c0_seq1.mrna1
ChrX	gffcl	locus	65600711	65601433	.	-	.	ID=RLOC_00003766;geneIDs=comp182723_c0_seq1.path1;transcripts=comp182723_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65600711	65601433	.	-	.	ID=comp182723_c0_seq1.mrna1;geneID=comp182723_c0_seq1.path1;Name=comp182723_c0_seq1;Dir=sensecoverage=97.0;identity=100.0;matches=611;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003766
ChrX	stalkie_big_nohaplotig	exon	65600711	65601051	100	-	.	Parent=comp182723_c0_seq1.mrna1;Target=comp182723_c0_seq1 271 611 +
ChrX	stalkie_big_nohaplotig	exon	65601106	65601160	100	-	.	Parent=comp182723_c0_seq1.mrna1;Target=comp182723_c0_seq1 216 270 +
ChrX	stalkie_big_nohaplotig	exon	65601219	65601433	100	-	.	Parent=comp182723_c0_seq1.mrna1;Target=comp182723_c0_seq1 1 215 +
ChrX	stalkie_big_nohaplotig	CDS	65600899	65601051	.	-	0	Parent=comp182723_c0_seq1.mrna1;Target=comp182723_c0_seq1 271 423 +
ChrX	stalkie_big_nohaplotig	CDS	65601106	65601160	.	-	1	Parent=comp182723_c0_seq1.mrna1;Target=comp182723_c0_seq1 216 270 +
ChrX	stalkie_big_nohaplotig	CDS	65601219	65601277	.	-	0	Parent=comp182723_c0_seq1.mrna1;Target=comp182723_c0_seq1 157 215 +
ChrX	gffcl	locus	65626707	65627853	.	+	.	ID=RLOC_00003767;geneIDs=comp154689_c0_seq1.path1;transcripts=comp154689_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65626707	65627853	.	+	.	ID=comp154689_c0_seq1.mrna1;geneID=comp154689_c0_seq1.path1;Name=comp154689_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1147;mismatches=0;indels=1;unknowns=0;Target=comp154689_c0_seq1 1149 2 .;CDS_Target=comp154689_c0_seq1 174 115 .;locus=RLOC_00003767
ChrX	stalkie_big_nohaplotig	exon	65626707	65627853	99	+	.	Parent=comp154689_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65626820	65626878	.	+	0	Parent=comp154689_c0_seq1.mrna1
ChrX	gffcl	locus	65767536	65768237	.	+	.	ID=RLOC_00003768;geneIDs=FBgn0023407.path1;transcripts=FBgn0023407.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65767536	65768237	.	+	.	ID=FBgn0023407.mrna1;geneID=FBgn0023407.path1;Name=FBgn0023407;Dir=indeterminatecoverage=99.6;identity=100.0;matches=702;mismatches=0;indels=0;unknowns=0;Target=FBgn0023407 702 1 .;locus=RLOC_00003768
ChrX	stalkie_big_nohaplotig	exon	65767536	65768237	100	+	.	Parent=FBgn0023407.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65767536	65768237	.	+	0	Parent=FBgn0023407.mrna1
ChrX	gffcl	locus	65768510	65770055	.	+	.	ID=RLOC_00003769;geneIDs=comp162622_c2_seq1.path1;transcripts=comp162622_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65768510	65770055	.	+	.	ID=comp162622_c2_seq1.mrna1;geneID=comp162622_c2_seq1.path1;Name=comp162622_c2_seq1;Dir=sensecoverage=99.9;identity=99.8;matches=1449;mismatches=3;indels=0;unknowns=0;Target=comp162622_c2_seq1 2 1192 +;locus=RLOC_00003769
ChrX	stalkie_big_nohaplotig	exon	65768510	65769813	99	+	.	Parent=comp162622_c2_seq1.mrna1;Target=comp162622_c2_seq1 1 1304 +
ChrX	stalkie_big_nohaplotig	exon	65769908	65770055	100	+	.	Parent=comp162622_c2_seq1.mrna1;Target=comp162622_c2_seq1 1305 1452 +
ChrX	stalkie_big_nohaplotig	CDS	65768511	65769701	.	+	0	Parent=comp162622_c2_seq1.mrna1
ChrX	gffcl	locus	65773426	65789541	.	.	.	ID=RLOC_00003770;geneIDs=comp143334_c0_seq1.path1,comp162980_c0_seq1.path1;transcripts=comp162980_c0_seq1.mrna1,comp143334_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65773426	65789500	.	-	.	ID=comp162980_c0_seq1.mrna1;geneID=comp162980_c0_seq1.path1;Name=comp162980_c0_seq1;Dir=antisensecoverage=96.6;identity=99.5;matches=2304;mismatches=10;indels=2;unknowns=0;Target=comp162980_c0_seq1 1456 1647 .;locus=RLOC_00003770
ChrX	stalkie_big_nohaplotig	exon	65773426	65775724	99	-	.	Parent=comp162980_c0_seq1.mrna1;Target=comp162980_c0_seq1 1 2301 -
ChrX	stalkie_big_nohaplotig	exon	65786169	65786176	87	-	.	Parent=comp162980_c0_seq1.mrna1;Target=comp162980_c0_seq1 2302 2309 -
ChrX	stalkie_big_nohaplotig	exon	65789494	65789500	100	-	.	Parent=comp162980_c0_seq1.mrna1;Target=comp162980_c0_seq1 2310 2316 -
ChrX	stalkie_big_nohaplotig	CDS	65774879	65775070	.	-	0	Parent=comp162980_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65789104	65789541	.	+	.	ID=comp143334_c0_seq1.mrna1;geneID=comp143334_c0_seq1.path1;Name=comp143334_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=436;mismatches=2;indels=1;unknowns=0;Target=comp143334_c0_seq1 439 1 .;CDS_Target=comp143334_c0_seq1 300 229 .;locus=RLOC_00003770
ChrX	stalkie_big_nohaplotig	exon	65789104	65789541	99	+	.	Parent=comp143334_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65789331	65789402	.	+	0	Parent=comp143334_c0_seq1.mrna1
ChrX	gffcl	locus	65777258	65778064	.	-	.	ID=RLOC_00003771;geneIDs=comp149472_c2_seq1.path1;transcripts=comp149472_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65777258	65778064	.	-	.	ID=comp149472_c2_seq1.mrna1;geneID=comp149472_c2_seq1.path1;Name=comp149472_c2_seq1;Dir=indeterminatecoverage=97.3;identity=99.8;matches=805;mismatches=2;indels=0;unknowns=0;Target=comp149472_c2_seq1 807 1 .;CDS_Target=comp149472_c2_seq1 638 552 .;locus=RLOC_00003771
ChrX	stalkie_big_nohaplotig	exon	65777258	65778064	99	-	.	Parent=comp149472_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65777427	65777513	.	-	0	Parent=comp149472_c2_seq1.mrna1
ChrX	gffcl	locus	65790668	65791201	.	+	.	ID=RLOC_00003772;geneIDs=comp156559_c0_seq1.path1;transcripts=comp156559_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65790668	65791201	.	+	.	ID=comp156559_c0_seq1.mrna1;geneID=comp156559_c0_seq1.path1;Name=comp156559_c0_seq1;Dir=indeterminatecoverage=97.1;identity=97.0;matches=518;mismatches=16;indels=0;unknowns=0;Target=comp156559_c0_seq1 534 1 .;CDS_Target=comp156559_c0_seq1 259 170 .;locus=RLOC_00003772
ChrX	stalkie_big_nohaplotig	exon	65790668	65791201	97	+	.	Parent=comp156559_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65790837	65790926	.	+	0	Parent=comp156559_c0_seq1.mrna1
ChrX	gffcl	locus	65791904	65793578	.	+	.	ID=RLOC_00003773;geneIDs=comp161811_c0_seq1.path1;transcripts=comp161811_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65791904	65793578	.	+	.	ID=comp161811_c0_seq1.mrna1;geneID=comp161811_c0_seq1.path1;Name=comp161811_c0_seq1;Dir=indeterminatecoverage=99.2;identity=97.8;matches=1674;mismatches=1;indels=36;unknowns=0;Target=comp161811_c0_seq1 1725 15 .;CDS_Target=comp161811_c0_seq1 1330 1274 .;locus=RLOC_00003773
ChrX	stalkie_big_nohaplotig	exon	65791904	65793578	97	+	.	Parent=comp161811_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65793127	65793183	.	+	0	Parent=comp161811_c0_seq1.mrna1
ChrX	gffcl	locus	65796813	65809841	.	-	.	ID=RLOC_00003774;geneIDs=FBgn0031865.1.path1;transcripts=FBgn0031865.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65796813	65809841	.	-	.	ID=FBgn0031865.1.mrna1;geneID=FBgn0031865.1.path1;Name=FBgn0031865.1;Dir=sensecoverage=99.7;identity=100.0;matches=2081;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003774
ChrX	stalkie_big_nohaplotig	exon	65796813	65796970	100	-	.	Parent=FBgn0031865.1.mrna1;Target=FBgn0031865.1 1931 2088 +
ChrX	stalkie_big_nohaplotig	exon	65797036	65797390	100	-	.	Parent=FBgn0031865.1.mrna1;Target=FBgn0031865.1 1576 1930 +
ChrX	stalkie_big_nohaplotig	exon	65797462	65798229	100	-	.	Parent=FBgn0031865.1.mrna1;Target=FBgn0031865.1 808 1575 +
ChrX	stalkie_big_nohaplotig	exon	65799698	65799870	100	-	.	Parent=FBgn0031865.1.mrna1;Target=FBgn0031865.1 635 807 +
ChrX	stalkie_big_nohaplotig	exon	65799951	65800202	100	-	.	Parent=FBgn0031865.1.mrna1;Target=FBgn0031865.1 383 634 +
ChrX	stalkie_big_nohaplotig	exon	65806162	65806273	100	-	.	Parent=FBgn0031865.1.mrna1;Target=FBgn0031865.1 271 382 +
ChrX	stalkie_big_nohaplotig	exon	65809579	65809841	100	-	.	Parent=FBgn0031865.1.mrna1;Target=FBgn0031865.1 8 270 +
ChrX	stalkie_big_nohaplotig	CDS	65796813	65796970	.	-	2	Parent=FBgn0031865.1.mrna1;Target=FBgn0031865.1 1931 2088 +
ChrX	stalkie_big_nohaplotig	CDS	65797036	65797390	.	-	0	Parent=FBgn0031865.1.mrna1;Target=FBgn0031865.1 1576 1930 +
ChrX	stalkie_big_nohaplotig	CDS	65797462	65798229	.	-	0	Parent=FBgn0031865.1.mrna1;Target=FBgn0031865.1 808 1575 +
ChrX	stalkie_big_nohaplotig	CDS	65799698	65799870	.	-	2	Parent=FBgn0031865.1.mrna1;Target=FBgn0031865.1 635 807 +
ChrX	stalkie_big_nohaplotig	CDS	65799951	65800202	.	-	2	Parent=FBgn0031865.1.mrna1;Target=FBgn0031865.1 383 634 +
ChrX	stalkie_big_nohaplotig	CDS	65806162	65806273	.	-	0	Parent=FBgn0031865.1.mrna1;Target=FBgn0031865.1 271 382 +
ChrX	stalkie_big_nohaplotig	CDS	65809579	65809839	.	-	0	Parent=FBgn0031865.1.mrna1;Target=FBgn0031865.1 10 270 +
ChrX	gffcl	locus	65803493	65927437	.	+	.	ID=RLOC_00003775;geneIDs=ORF3052.path1,FBgn0031866.1.path1,comp163821_c1_seq1.path1;transcripts=comp163821_c1_seq1.mrna1,ORF3052.mrna1,FBgn0031866.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65803493	65915636	.	+	.	ID=comp163821_c1_seq1.mrna1;geneID=comp163821_c1_seq1.path1;Name=comp163821_c1_seq1;Dir=indeterminatecoverage=26.9;identity=91.0;matches=718;mismatches=34;indels=37;unknowns=0;Target=comp163821_c1_seq1 2827 2744 .;locus=RLOC_00003775
ChrX	stalkie_big_nohaplotig	exon	65803493	65803494	100	+	.	Parent=comp163821_c1_seq1.mrna1;Target=comp163821_c1_seq1 2141 2140 .
ChrX	stalkie_big_nohaplotig	exon	65808717	65808722	100	+	.	Parent=comp163821_c1_seq1.mrna1;Target=comp163821_c1_seq1 2147 2142 .
ChrX	stalkie_big_nohaplotig	exon	65816457	65816461	100	+	.	Parent=comp163821_c1_seq1.mrna1;Target=comp163821_c1_seq1 2152 2148 .
ChrX	stalkie_big_nohaplotig	exon	65832339	65832341	100	+	.	Parent=comp163821_c1_seq1.mrna1;Target=comp163821_c1_seq1 2156 2154 .
ChrX	stalkie_big_nohaplotig	exon	65835371	65835372	100	+	.	Parent=comp163821_c1_seq1.mrna1;Target=comp163821_c1_seq1 2158 2157 .
ChrX	stalkie_big_nohaplotig	exon	65835499	65835505	100	+	.	Parent=comp163821_c1_seq1.mrna1;Target=comp163821_c1_seq1 2165 2159 .
ChrX	stalkie_big_nohaplotig	exon	65840936	65840945	100	+	.	Parent=comp163821_c1_seq1.mrna1;Target=comp163821_c1_seq1 2175 2166 .
ChrX	stalkie_big_nohaplotig	exon	65847616	65847620	100	+	.	Parent=comp163821_c1_seq1.mrna1;Target=comp163821_c1_seq1 2201 2197 .
ChrX	stalkie_big_nohaplotig	exon	65850624	65850627	100	+	.	Parent=comp163821_c1_seq1.mrna1;Target=comp163821_c1_seq1 2205 2202 .
ChrX	stalkie_big_nohaplotig	exon	65854427	65854434	100	+	.	Parent=comp163821_c1_seq1.mrna1;Target=comp163821_c1_seq1 2213 2206 .
ChrX	stalkie_big_nohaplotig	exon	65862236	65862238	100	+	.	Parent=comp163821_c1_seq1.mrna1;Target=comp163821_c1_seq1 2216 2214 .
ChrX	stalkie_big_nohaplotig	exon	65863902	65863915	100	+	.	Parent=comp163821_c1_seq1.mrna1;Target=comp163821_c1_seq1 2230 2217 .
ChrX	stalkie_big_nohaplotig	exon	65867840	65867844	100	+	.	Parent=comp163821_c1_seq1.mrna1;Target=comp163821_c1_seq1 2235 2231 .
ChrX	stalkie_big_nohaplotig	exon	65871060	65871072	100	+	.	Parent=comp163821_c1_seq1.mrna1;Target=comp163821_c1_seq1 2248 2236 .
ChrX	stalkie_big_nohaplotig	exon	65876974	65877020	61	+	.	Parent=comp163821_c1_seq1.mrna1;Target=comp163821_c1_seq1 2290 2249 .
ChrX	stalkie_big_nohaplotig	exon	65880331	65880340	100	+	.	Parent=comp163821_c1_seq1.mrna1;Target=comp163821_c1_seq1 2300 2291 .
ChrX	stalkie_big_nohaplotig	exon	65895908	65895912	100	+	.	Parent=comp163821_c1_seq1.mrna1;Target=comp163821_c1_seq1 2305 2301 .
ChrX	stalkie_big_nohaplotig	exon	65897528	65897532	100	+	.	Parent=comp163821_c1_seq1.mrna1;Target=comp163821_c1_seq1 2310 2306 .
ChrX	stalkie_big_nohaplotig	exon	65902658	65902661	100	+	.	Parent=comp163821_c1_seq1.mrna1;Target=comp163821_c1_seq1 2314 2311 .
ChrX	stalkie_big_nohaplotig	exon	65914172	65914176	100	+	.	Parent=comp163821_c1_seq1.mrna1;Target=comp163821_c1_seq1 2319 2315 .
ChrX	stalkie_big_nohaplotig	exon	65915025	65915636	91	+	.	Parent=comp163821_c1_seq1.mrna1;Target=comp163821_c1_seq1 2925 2320 .
ChrX	stalkie_big_nohaplotig	CDS	65915455	65915538	.	+	0	Parent=comp163821_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65816455	65817283	.	+	.	ID=ORF3052.mrna1;geneID=ORF3052.path1;Name=ORF3052;Dir=sensecoverage=100.0;identity=100.0;matches=774;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003775
ChrX	stalkie_big_nohaplotig	exon	65816455	65816842	100	+	.	Parent=ORF3052.mrna1;Target=ORF3052 1 388 +
ChrX	stalkie_big_nohaplotig	exon	65816898	65817283	100	+	.	Parent=ORF3052.mrna1;Target=ORF3052 389 774 +
ChrX	stalkie_big_nohaplotig	CDS	65816455	65816842	.	+	0	Parent=ORF3052.mrna1;Target=ORF3052 1 388 +
ChrX	stalkie_big_nohaplotig	CDS	65816898	65817283	.	+	2	Parent=ORF3052.mrna1;Target=ORF3052 389 774 +
ChrX	stalkie_big_nohaplotig	mRNA	65902633	65927437	.	+	.	ID=FBgn0031866.1.mrna1;geneID=FBgn0031866.1.path1;Name=FBgn0031866.1;Dir=sensecoverage=100.0;identity=100.0;matches=4242;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003775
ChrX	stalkie_big_nohaplotig	exon	65902633	65903738	100	+	.	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 1 1106 +
ChrX	stalkie_big_nohaplotig	exon	65920229	65920461	100	+	.	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 1107 1339 +
ChrX	stalkie_big_nohaplotig	exon	65920736	65921095	100	+	.	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 1340 1699 +
ChrX	stalkie_big_nohaplotig	exon	65922512	65922707	100	+	.	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 1700 1895 +
ChrX	stalkie_big_nohaplotig	exon	65922764	65922865	100	+	.	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 1896 1997 +
ChrX	stalkie_big_nohaplotig	exon	65922927	65923122	100	+	.	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 1998 2193 +
ChrX	stalkie_big_nohaplotig	exon	65923184	65923372	100	+	.	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 2194 2382 +
ChrX	stalkie_big_nohaplotig	exon	65923427	65923569	100	+	.	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 2383 2525 +
ChrX	stalkie_big_nohaplotig	exon	65923645	65924075	100	+	.	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 2526 2956 +
ChrX	stalkie_big_nohaplotig	exon	65925989	65926144	100	+	.	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 2957 3112 +
ChrX	stalkie_big_nohaplotig	exon	65926250	65926399	100	+	.	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 3113 3262 +
ChrX	stalkie_big_nohaplotig	exon	65926458	65927437	100	+	.	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 3263 4242 +
ChrX	stalkie_big_nohaplotig	CDS	65902633	65903738	.	+	0	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 1 1106 +
ChrX	stalkie_big_nohaplotig	CDS	65920229	65920461	.	+	1	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 1107 1339 +
ChrX	stalkie_big_nohaplotig	CDS	65920736	65921095	.	+	2	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 1340 1699 +
ChrX	stalkie_big_nohaplotig	CDS	65922512	65922707	.	+	2	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 1700 1895 +
ChrX	stalkie_big_nohaplotig	CDS	65922764	65922865	.	+	1	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 1896 1997 +
ChrX	stalkie_big_nohaplotig	CDS	65922927	65923122	.	+	1	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 1998 2193 +
ChrX	stalkie_big_nohaplotig	CDS	65923184	65923372	.	+	0	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 2194 2382 +
ChrX	stalkie_big_nohaplotig	CDS	65923427	65923569	.	+	0	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 2383 2525 +
ChrX	stalkie_big_nohaplotig	CDS	65923645	65924075	.	+	1	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 2526 2956 +
ChrX	stalkie_big_nohaplotig	CDS	65925989	65926144	.	+	2	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 2957 3112 +
ChrX	stalkie_big_nohaplotig	CDS	65926250	65926399	.	+	2	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 3113 3262 +
ChrX	stalkie_big_nohaplotig	CDS	65926458	65927437	.	+	2	Parent=FBgn0031866.1.mrna1;Target=FBgn0031866.1 3263 4242 +
ChrX	gffcl	locus	65849884	65850373	.	-	.	ID=RLOC_00003776;geneIDs=comp460189_c0_seq1.path1;transcripts=comp460189_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65849884	65850373	.	-	.	ID=comp460189_c0_seq1.mrna1;geneID=comp460189_c0_seq1.path1;Name=comp460189_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=489;mismatches=1;indels=0;unknowns=0;Target=comp460189_c0_seq1 490 1 .;CDS_Target=comp460189_c0_seq1 68 3 .;locus=RLOC_00003776
ChrX	stalkie_big_nohaplotig	exon	65849884	65850373	99	-	.	Parent=comp460189_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	65850306	65850371	.	-	0	Parent=comp460189_c0_seq1.mrna1
ChrX	gffcl	locus	65861968	65863078	.	-	.	ID=RLOC_00003777;geneIDs=FBgn0035593.3.path1;transcripts=FBgn0035593.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65861968	65863078	.	-	.	ID=FBgn0035593.3.mrna1;geneID=FBgn0035593.3.path1;Name=FBgn0035593.3;Dir=sensecoverage=100.0;identity=100.0;matches=1038;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003777
ChrX	stalkie_big_nohaplotig	exon	65861968	65862174	100	-	.	Parent=FBgn0035593.3.mrna1;Target=FBgn0035593.3 832 1038 +
ChrX	stalkie_big_nohaplotig	exon	65862248	65863078	100	-	.	Parent=FBgn0035593.3.mrna1;Target=FBgn0035593.3 1 831 +
ChrX	stalkie_big_nohaplotig	CDS	65861968	65862174	.	-	0	Parent=FBgn0035593.3.mrna1;Target=FBgn0035593.3 832 1038 +
ChrX	stalkie_big_nohaplotig	CDS	65862248	65863078	.	-	0	Parent=FBgn0035593.3.mrna1;Target=FBgn0035593.3 1 831 +
ChrX	gffcl	locus	65935398	65936594	.	-	.	ID=RLOC_00003778;geneIDs=FBgn0042092.1.path1;transcripts=FBgn0042092.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65935398	65936594	.	-	.	ID=FBgn0042092.1.mrna1;geneID=FBgn0042092.1.path1;Name=FBgn0042092.1;Dir=sensecoverage=99.9;identity=100.0;matches=1142;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003778
ChrX	stalkie_big_nohaplotig	exon	65935398	65935900	100	-	.	Parent=FBgn0042092.1.mrna1;Target=FBgn0042092.1 640 1142 +
ChrX	stalkie_big_nohaplotig	exon	65935956	65936594	100	-	.	Parent=FBgn0042092.1.mrna1;Target=FBgn0042092.1 1 639 +
ChrX	stalkie_big_nohaplotig	CDS	65935400	65935900	.	-	0	Parent=FBgn0042092.1.mrna1;Target=FBgn0042092.1 640 1140 +
ChrX	stalkie_big_nohaplotig	CDS	65935956	65936594	.	-	0	Parent=FBgn0042092.1.mrna1;Target=FBgn0042092.1 1 639 +
ChrX	gffcl	locus	65940330	65941292	.	+	.	ID=RLOC_00003779;geneIDs=FBgn0085638.1.path1;transcripts=FBgn0085638.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65940330	65941292	.	+	.	ID=FBgn0085638.1.mrna1;geneID=FBgn0085638.1.path1;Name=FBgn0085638.1;Dir=sensecoverage=100.0;identity=100.0;matches=717;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003779
ChrX	stalkie_big_nohaplotig	exon	65940330	65940452	100	+	.	Parent=FBgn0085638.1.mrna1;Target=FBgn0085638.1 1 123 +
ChrX	stalkie_big_nohaplotig	exon	65940572	65940916	100	+	.	Parent=FBgn0085638.1.mrna1;Target=FBgn0085638.1 124 468 +
ChrX	stalkie_big_nohaplotig	exon	65941044	65941292	100	+	.	Parent=FBgn0085638.1.mrna1;Target=FBgn0085638.1 469 717 +
ChrX	stalkie_big_nohaplotig	CDS	65940330	65940452	.	+	0	Parent=FBgn0085638.1.mrna1;Target=FBgn0085638.1 1 123 +
ChrX	stalkie_big_nohaplotig	CDS	65940572	65940916	.	+	0	Parent=FBgn0085638.1.mrna1;Target=FBgn0085638.1 124 468 +
ChrX	stalkie_big_nohaplotig	CDS	65941044	65941292	.	+	0	Parent=FBgn0085638.1.mrna1;Target=FBgn0085638.1 469 717 +
ChrX	gffcl	locus	65948631	65949926	.	+	.	ID=RLOC_00003780;geneIDs=comp144251_c0_seq1.path1;transcripts=comp144251_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65948631	65949926	.	+	.	ID=comp144251_c0_seq1.mrna1;geneID=comp144251_c0_seq1.path1;Name=comp144251_c0_seq1;Dir=antisensecoverage=99.2;identity=99.8;matches=1097;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003780
ChrX	stalkie_big_nohaplotig	exon	65948631	65948845	99	+	.	Parent=comp144251_c0_seq1.mrna1;Target=comp144251_c0_seq1 888 1102 -
ChrX	stalkie_big_nohaplotig	exon	65948911	65949047	100	+	.	Parent=comp144251_c0_seq1.mrna1;Target=comp144251_c0_seq1 751 887 -
ChrX	stalkie_big_nohaplotig	exon	65949121	65949268	100	+	.	Parent=comp144251_c0_seq1.mrna1;Target=comp144251_c0_seq1 603 750 -
ChrX	stalkie_big_nohaplotig	exon	65949328	65949926	100	+	.	Parent=comp144251_c0_seq1.mrna1;Target=comp144251_c0_seq1 4 602 -
ChrX	stalkie_big_nohaplotig	CDS	65948915	65949047	.	+	0	Parent=comp144251_c0_seq1.mrna1;Target=comp144251_c0_seq1 751 883 .
ChrX	stalkie_big_nohaplotig	CDS	65949121	65949268	.	+	2	Parent=comp144251_c0_seq1.mrna1;Target=comp144251_c0_seq1 603 750 .
ChrX	stalkie_big_nohaplotig	CDS	65949328	65949676	.	+	1	Parent=comp144251_c0_seq1.mrna1;Target=comp144251_c0_seq1 254 602 .
ChrX	gffcl	locus	65953932	65956353	.	-	.	ID=RLOC_00003781;geneIDs=FBgn0250830.1.path1;transcripts=FBgn0250830.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65953932	65956353	.	-	.	ID=FBgn0250830.1.mrna1;geneID=FBgn0250830.1.path1;Name=FBgn0250830.1;Dir=sensecoverage=100.0;identity=100.0;matches=2223;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003781
ChrX	stalkie_big_nohaplotig	exon	65953932	65954705	100	-	.	Parent=FBgn0250830.1.mrna1;Target=FBgn0250830.1 1450 2223 +
ChrX	stalkie_big_nohaplotig	exon	65954770	65955977	100	-	.	Parent=FBgn0250830.1.mrna1;Target=FBgn0250830.1 242 1449 +
ChrX	stalkie_big_nohaplotig	exon	65956036	65956233	100	-	.	Parent=FBgn0250830.1.mrna1;Target=FBgn0250830.1 44 241 +
ChrX	stalkie_big_nohaplotig	exon	65956311	65956353	100	-	.	Parent=FBgn0250830.1.mrna1;Target=FBgn0250830.1 1 43 +
ChrX	stalkie_big_nohaplotig	CDS	65953932	65954705	.	-	0	Parent=FBgn0250830.1.mrna1;Target=FBgn0250830.1 1450 2223 +
ChrX	stalkie_big_nohaplotig	CDS	65954770	65955977	.	-	2	Parent=FBgn0250830.1.mrna1;Target=FBgn0250830.1 242 1449 +
ChrX	stalkie_big_nohaplotig	CDS	65956036	65956233	.	-	2	Parent=FBgn0250830.1.mrna1;Target=FBgn0250830.1 44 241 +
ChrX	stalkie_big_nohaplotig	CDS	65956311	65956353	.	-	0	Parent=FBgn0250830.1.mrna1;Target=FBgn0250830.1 1 43 +
ChrX	gffcl	locus	65961036	65999948	.	+	.	ID=RLOC_00003782;geneIDs=FBgn0262124.1.path1;transcripts=FBgn0262124.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	65961036	65999948	.	+	.	ID=FBgn0262124.1.mrna1;geneID=FBgn0262124.1.path1;Name=FBgn0262124.1;Dir=sensecoverage=99.9;identity=100.0;matches=2397;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003782
ChrX	stalkie_big_nohaplotig	exon	65961036	65961412	100	+	.	Parent=FBgn0262124.1.mrna1;Target=FBgn0262124.1 1 377 +
ChrX	stalkie_big_nohaplotig	exon	65996177	65996495	100	+	.	Parent=FBgn0262124.1.mrna1;Target=FBgn0262124.1 378 696 +
ChrX	stalkie_big_nohaplotig	exon	65996556	65996726	100	+	.	Parent=FBgn0262124.1.mrna1;Target=FBgn0262124.1 697 867 +
ChrX	stalkie_big_nohaplotig	exon	65996816	65997031	100	+	.	Parent=FBgn0262124.1.mrna1;Target=FBgn0262124.1 868 1083 +
ChrX	stalkie_big_nohaplotig	exon	65997164	65997337	100	+	.	Parent=FBgn0262124.1.mrna1;Target=FBgn0262124.1 1084 1257 +
ChrX	stalkie_big_nohaplotig	exon	65998669	65999314	100	+	.	Parent=FBgn0262124.1.mrna1;Target=FBgn0262124.1 1258 1903 +
ChrX	stalkie_big_nohaplotig	exon	65999388	65999654	100	+	.	Parent=FBgn0262124.1.mrna1;Target=FBgn0262124.1 1904 2170 +
ChrX	stalkie_big_nohaplotig	exon	65999722	65999948	100	+	.	Parent=FBgn0262124.1.mrna1;Target=FBgn0262124.1 2171 2397 +
ChrX	stalkie_big_nohaplotig	CDS	65961036	65961412	.	+	0	Parent=FBgn0262124.1.mrna1;Target=FBgn0262124.1 1 377 +
ChrX	stalkie_big_nohaplotig	CDS	65996177	65996495	.	+	1	Parent=FBgn0262124.1.mrna1;Target=FBgn0262124.1 378 696 +
ChrX	stalkie_big_nohaplotig	CDS	65996556	65996726	.	+	0	Parent=FBgn0262124.1.mrna1;Target=FBgn0262124.1 697 867 +
ChrX	stalkie_big_nohaplotig	CDS	65996816	65997031	.	+	0	Parent=FBgn0262124.1.mrna1;Target=FBgn0262124.1 868 1083 +
ChrX	stalkie_big_nohaplotig	CDS	65997164	65997337	.	+	0	Parent=FBgn0262124.1.mrna1;Target=FBgn0262124.1 1084 1257 +
ChrX	stalkie_big_nohaplotig	CDS	65998669	65999314	.	+	0	Parent=FBgn0262124.1.mrna1;Target=FBgn0262124.1 1258 1903 +
ChrX	stalkie_big_nohaplotig	CDS	65999388	65999654	.	+	2	Parent=FBgn0262124.1.mrna1;Target=FBgn0262124.1 1904 2170 +
ChrX	stalkie_big_nohaplotig	CDS	65999722	65999948	.	+	2	Parent=FBgn0262124.1.mrna1;Target=FBgn0262124.1 2171 2397 +
ChrX	gffcl	locus	66005490	66005741	.	+	.	ID=RLOC_00003783;geneIDs=comp188451_c0_seq1.path1;transcripts=comp188451_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66005490	66005741	.	+	.	ID=comp188451_c0_seq1.mrna1;geneID=comp188451_c0_seq1.path1;Name=comp188451_c0_seq1;Dir=indeterminatecoverage=88.7;identity=100.0;matches=252;mismatches=0;indels=0;unknowns=0;Target=comp188451_c0_seq1 284 33 .;CDS_Target=comp188451_c0_seq1 116 33 .;locus=RLOC_00003783
ChrX	stalkie_big_nohaplotig	exon	66005490	66005741	100	+	.	Parent=comp188451_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	66005490	66005573	.	+	0	Parent=comp188451_c0_seq1.mrna1
ChrX	gffcl	locus	66008640	66009927	.	-	.	ID=RLOC_00003784;geneIDs=comp157748_c0_seq1.path1;transcripts=comp157748_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66008640	66009927	.	-	.	ID=comp157748_c0_seq1.mrna1;geneID=comp157748_c0_seq1.path1;Name=comp157748_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1287;mismatches=1;indels=0;unknowns=0;Target=comp157748_c0_seq1 1289 2 .;CDS_Target=comp157748_c0_seq1 439 365 .;locus=RLOC_00003784
ChrX	stalkie_big_nohaplotig	exon	66008640	66009927	99	-	.	Parent=comp157748_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	66009490	66009564	.	-	0	Parent=comp157748_c0_seq1.mrna1
ChrX	gffcl	locus	66010167	66022449	.	-	.	ID=RLOC_00003785;geneIDs=FBgn0028554.1.path1,comp151886_c0_seq1.path1;transcripts=FBgn0028554.1.mrna1,comp151886_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66010167	66022449	.	-	.	ID=FBgn0028554.1.mrna1;geneID=FBgn0028554.1.path1;Name=FBgn0028554.1;Dir=sensecoverage=100.0;identity=100.0;matches=723;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003785
ChrX	stalkie_big_nohaplotig	exon	66010167	66010512	100	-	.	Parent=FBgn0028554.1.mrna1;Target=FBgn0028554.1 378 723 +
ChrX	stalkie_big_nohaplotig	exon	66022013	66022347	100	-	.	Parent=FBgn0028554.1.mrna1;Target=FBgn0028554.1 43 377 +
ChrX	stalkie_big_nohaplotig	exon	66022408	66022449	100	-	.	Parent=FBgn0028554.1.mrna1;Target=FBgn0028554.1 1 42 +
ChrX	stalkie_big_nohaplotig	CDS	66010167	66010512	.	-	1	Parent=FBgn0028554.1.mrna1;Target=FBgn0028554.1 378 723 +
ChrX	stalkie_big_nohaplotig	CDS	66022013	66022347	.	-	0	Parent=FBgn0028554.1.mrna1;Target=FBgn0028554.1 43 377 +
ChrX	stalkie_big_nohaplotig	CDS	66022408	66022449	.	-	0	Parent=FBgn0028554.1.mrna1;Target=FBgn0028554.1 1 42 +
ChrX	stalkie_big_nohaplotig	mRNA	66020995	66022036	.	-	.	ID=comp151886_c0_seq1.mrna1;geneID=comp151886_c0_seq1.path1;Name=comp151886_c0_seq1;Dir=sensecoverage=99.5;identity=96.3;matches=629;mismatches=4;indels=20;unknowns=0;Target=comp151886_c0_seq1 412 588 +;locus=RLOC_00003785
ChrX	stalkie_big_nohaplotig	exon	66020995	66021358	93	-	.	Parent=comp151886_c0_seq1.mrna1;Target=comp151886_c0_seq1 270 653 +
ChrX	stalkie_big_nohaplotig	exon	66021416	66021579	100	-	.	Parent=comp151886_c0_seq1.mrna1;Target=comp151886_c0_seq1 106 269 +
ChrX	stalkie_big_nohaplotig	exon	66021679	66021759	100	-	.	Parent=comp151886_c0_seq1.mrna1;Target=comp151886_c0_seq1 25 105 +
ChrX	stalkie_big_nohaplotig	exon	66022013	66022036	100	-	.	Parent=comp151886_c0_seq1.mrna1;Target=comp151886_c0_seq1 1 24 +
ChrX	stalkie_big_nohaplotig	CDS	66021060	66021236	.	-	0	Parent=comp151886_c0_seq1.mrna1
ChrX	gffcl	locus	66013812	66015576	.	-	.	ID=RLOC_00003786;geneIDs=FBgn0026196.1.path1;transcripts=FBgn0026196.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66013812	66015576	.	-	.	ID=FBgn0026196.1.mrna1;geneID=FBgn0026196.1.path1;Name=FBgn0026196.1;Dir=sensecoverage=100.0;identity=100.0;matches=1563;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003786
ChrX	stalkie_big_nohaplotig	exon	66013812	66014076	100	-	.	Parent=FBgn0026196.1.mrna1;Target=FBgn0026196.1 1299 1563 +
ChrX	stalkie_big_nohaplotig	exon	66014279	66015576	100	-	.	Parent=FBgn0026196.1.mrna1;Target=FBgn0026196.1 1 1298 +
ChrX	stalkie_big_nohaplotig	CDS	66013812	66014076	.	-	1	Parent=FBgn0026196.1.mrna1;Target=FBgn0026196.1 1299 1563 +
ChrX	stalkie_big_nohaplotig	CDS	66014279	66015576	.	-	0	Parent=FBgn0026196.1.mrna1;Target=FBgn0026196.1 1 1298 +
ChrX	gffcl	locus	66030220	66031134	.	+	.	ID=RLOC_00003787;geneIDs=comp136383_c0_seq1.path1;transcripts=comp136383_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66030220	66031134	.	+	.	ID=comp136383_c0_seq1.mrna1;geneID=comp136383_c0_seq1.path1;Name=comp136383_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=592;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003787
ChrX	stalkie_big_nohaplotig	exon	66030220	66030790	99	+	.	Parent=comp136383_c0_seq1.mrna1;Target=comp136383_c0_seq1 1 571 +
ChrX	stalkie_big_nohaplotig	exon	66031113	66031134	100	+	.	Parent=comp136383_c0_seq1.mrna1;Target=comp136383_c0_seq1 572 593 +
ChrX	stalkie_big_nohaplotig	CDS	66030703	66030790	.	+	0	Parent=comp136383_c0_seq1.mrna1;Target=comp136383_c0_seq1 484 571 +
ChrX	stalkie_big_nohaplotig	CDS	66031113	66031126	.	+	2	Parent=comp136383_c0_seq1.mrna1;Target=comp136383_c0_seq1 572 585 +
ChrX	gffcl	locus	66031378	66032974	.	+	.	ID=RLOC_00003788;geneIDs=FBgn0004838.1.path1;transcripts=FBgn0004838.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66031378	66032974	.	+	.	ID=FBgn0004838.1.mrna1;geneID=FBgn0004838.1.path1;Name=FBgn0004838.1;Dir=sensecoverage=100.0;identity=99.9;matches=1310;mismatches=0;indels=1;unknowns=0;Target=FBgn0004838.1 3 149 +;locus=RLOC_00003788
ChrX	stalkie_big_nohaplotig	exon	66031378	66031916	99	+	.	Parent=FBgn0004838.1.mrna1;Target=FBgn0004838.1 1 540 +
ChrX	stalkie_big_nohaplotig	exon	66032204	66032974	100	+	.	Parent=FBgn0004838.1.mrna1;Target=FBgn0004838.1 541 1311 +
ChrX	stalkie_big_nohaplotig	CDS	66031380	66031525	.	+	0	Parent=FBgn0004838.1.mrna1
ChrX	gffcl	locus	66033225	66034375	.	-	.	ID=RLOC_00003789;geneIDs=comp153830_c0_seq1.path1;transcripts=comp153830_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66033225	66034375	.	-	.	ID=comp153830_c0_seq1.mrna1;geneID=comp153830_c0_seq1.path1;Name=comp153830_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1151;mismatches=0;indels=0;unknowns=0;Target=comp153830_c0_seq1 1151 1 .;CDS_Target=comp153830_c0_seq1 87 1 .;locus=RLOC_00003789
ChrX	stalkie_big_nohaplotig	exon	66033225	66034375	100	-	.	Parent=comp153830_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	66034289	66034375	.	-	0	Parent=comp153830_c0_seq1.mrna1
ChrX	gffcl	locus	66036941	66038242	.	-	.	ID=RLOC_00003790;geneIDs=comp151178_c0_seq1.path1;transcripts=comp151178_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66036941	66038242	.	-	.	ID=comp151178_c0_seq1.mrna1;geneID=comp151178_c0_seq1.path1;Name=comp151178_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1300;mismatches=2;indels=3;unknowns=0;Target=comp151178_c0_seq1 1305 1 .;CDS_Target=comp151178_c0_seq1 87 1 .;locus=RLOC_00003790
ChrX	stalkie_big_nohaplotig	exon	66036941	66038242	99	-	.	Parent=comp151178_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	66038156	66038242	.	-	0	Parent=comp151178_c0_seq1.mrna1
ChrX	gffcl	locus	66039957	66040881	.	+	.	ID=RLOC_00003791;geneIDs=comp162350_c1_seq1.path1;transcripts=comp162350_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66039957	66040881	.	+	.	ID=comp162350_c1_seq1.mrna1;geneID=comp162350_c1_seq1.path1;Name=comp162350_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=924;mismatches=1;indels=0;unknowns=0;Target=comp162350_c1_seq1 925 1 .;CDS_Target=comp162350_c1_seq1 310 122 .;locus=RLOC_00003791
ChrX	stalkie_big_nohaplotig	exon	66039957	66040881	99	+	.	Parent=comp162350_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	66040078	66040266	.	+	0	Parent=comp162350_c1_seq1.mrna1
ChrX	gffcl	locus	66043360	66043878	.	+	.	ID=RLOC_00003792;geneIDs=comp140135_c0_seq1.path1;transcripts=comp140135_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66043360	66043878	.	+	.	ID=comp140135_c0_seq1.mrna1;geneID=comp140135_c0_seq1.path1;Name=comp140135_c0_seq1;Dir=indeterminatecoverage=96.5;identity=99.6;matches=517;mismatches=2;indels=0;unknowns=0;Target=comp140135_c0_seq1 538 20 .;CDS_Target=comp140135_c0_seq1 350 234 .;locus=RLOC_00003792
ChrX	stalkie_big_nohaplotig	exon	66043360	66043878	99	+	.	Parent=comp140135_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	66043574	66043690	.	+	0	Parent=comp140135_c0_seq1.mrna1
ChrX	gffcl	locus	66044384	67741681	.	-	.	ID=RLOC_00003793;geneIDs=comp135188_c0_seq1.path1,comp140932_c1_seq1.path1;transcripts=comp135188_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66044579	67741681	.	-	.	ID=comp135188_c0_seq1.mrna1;geneID=comp135188_c0_seq1.path1;Name=comp135188_c0_seq1;Dir=antisensecoverage=64.5;identity=99.8;matches=630;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003793
ChrX	stalkie_big_nohaplotig	exon	66044579	66045080	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 24 525 -
ChrX	stalkie_big_nohaplotig	exon	67583033	67583034	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 526 527 -
ChrX	stalkie_big_nohaplotig	exon	67586572	67586577	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 528 533 -
ChrX	stalkie_big_nohaplotig	exon	67588553	67588557	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 534 538 -
ChrX	stalkie_big_nohaplotig	exon	67603613	67603615	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 539 541 -
ChrX	stalkie_big_nohaplotig	exon	67608878	67608886	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 542 550 -
ChrX	stalkie_big_nohaplotig	exon	67610076	67610084	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 551 559 -
ChrX	stalkie_big_nohaplotig	exon	67610824	67610827	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 626 629 -
ChrX	stalkie_big_nohaplotig	exon	67638189	67638198	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 630 639 -
ChrX	stalkie_big_nohaplotig	exon	67639669	67639673	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 640 644 -
ChrX	stalkie_big_nohaplotig	exon	67652181	67652182	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 645 646 -
ChrX	stalkie_big_nohaplotig	exon	67655516	67655518	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 647 649 -
ChrX	stalkie_big_nohaplotig	exon	67662986	67662988	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 650 652 -
ChrX	stalkie_big_nohaplotig	exon	67666509	67666514	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 653 658 -
ChrX	stalkie_big_nohaplotig	exon	67674386	67674394	88	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 659 667 -
ChrX	stalkie_big_nohaplotig	exon	67680450	67680453	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 668 671 -
ChrX	stalkie_big_nohaplotig	exon	67704033	67704041	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 672 680 -
ChrX	stalkie_big_nohaplotig	exon	67706715	67706718	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 681 684 -
ChrX	stalkie_big_nohaplotig	exon	67710945	67710946	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 685 686 -
ChrX	stalkie_big_nohaplotig	exon	67716760	67716767	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 687 694 -
ChrX	stalkie_big_nohaplotig	exon	67722486	67722488	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 695 697 -
ChrX	stalkie_big_nohaplotig	exon	67732621	67732628	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 698 705 -
ChrX	stalkie_big_nohaplotig	exon	67740409	67740416	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 706 713 -
ChrX	stalkie_big_nohaplotig	exon	67741676	67741681	100	-	.	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 714 719 -
ChrX	stalkie_big_nohaplotig	CDS	66045060	66045080	.	-	0	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 505 525 .
ChrX	stalkie_big_nohaplotig	CDS	67583033	67583034	.	-	2	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 526 527 .
ChrX	stalkie_big_nohaplotig	CDS	67586572	67586577	.	-	2	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 528 533 .
ChrX	stalkie_big_nohaplotig	CDS	67588553	67588557	.	-	1	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 534 538 .
ChrX	stalkie_big_nohaplotig	CDS	67603613	67603615	.	-	1	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 539 541 .
ChrX	stalkie_big_nohaplotig	CDS	67608878	67608886	.	-	1	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 542 550 .
ChrX	stalkie_big_nohaplotig	CDS	67610076	67610084	.	-	1	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 551 559 .
ChrX	stalkie_big_nohaplotig	CDS	67610824	67610827	.	-	2	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 626 629 .
ChrX	stalkie_big_nohaplotig	CDS	67638189	67638198	.	-	0	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 630 639 .
ChrX	stalkie_big_nohaplotig	CDS	67639669	67639673	.	-	2	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 640 644 .
ChrX	stalkie_big_nohaplotig	CDS	67652181	67652182	.	-	1	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 645 646 .
ChrX	stalkie_big_nohaplotig	CDS	67655516	67655518	.	-	1	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 647 649 .
ChrX	stalkie_big_nohaplotig	CDS	67662986	67662988	.	-	1	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 650 652 .
ChrX	stalkie_big_nohaplotig	CDS	67666509	67666514	.	-	1	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 653 658 .
ChrX	stalkie_big_nohaplotig	CDS	67674386	67674394	.	-	1	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 659 667 .
ChrX	stalkie_big_nohaplotig	CDS	67680450	67680453	.	-	2	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 668 671 .
ChrX	stalkie_big_nohaplotig	CDS	67704033	67704041	.	-	2	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 672 680 .
ChrX	stalkie_big_nohaplotig	CDS	67706715	67706718	.	-	0	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 681 684 .
ChrX	stalkie_big_nohaplotig	CDS	67710945	67710946	.	-	2	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 685 686 .
ChrX	stalkie_big_nohaplotig	CDS	67716760	67716767	.	-	1	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 687 694 .
ChrX	stalkie_big_nohaplotig	CDS	67722486	67722488	.	-	1	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 695 697 .
ChrX	stalkie_big_nohaplotig	CDS	67732621	67732628	.	-	0	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 698 705 .
ChrX	stalkie_big_nohaplotig	CDS	67740409	67740416	.	-	2	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 706 713 .
ChrX	stalkie_big_nohaplotig	CDS	67741676	67741679	.	-	0	Parent=comp135188_c0_seq1.mrna1;Target=comp135188_c0_seq1 714 717 .
ChrX	gffcl	locus	66052673	66071130	.	+	.	ID=RLOC_00003794;geneIDs=FBgn0011737.1.path1,FBgn0011737.2.path1;transcripts=FBgn0011737.2.mrna1,FBgn0011737.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66052673	66071130	.	+	.	ID=FBgn0011737.2.mrna1;geneID=FBgn0011737.2.path1;Name=FBgn0011737.2;Dir=sensecoverage=100.0;identity=100.0;matches=1722;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003794
ChrX	stalkie_big_nohaplotig	exon	66052673	66053090	100	+	.	Parent=FBgn0011737.2.mrna1;Target=FBgn0011737.2 1 418 +
ChrX	stalkie_big_nohaplotig	exon	66053146	66053343	100	+	.	Parent=FBgn0011737.2.mrna1;Target=FBgn0011737.2 419 616 +
ChrX	stalkie_big_nohaplotig	exon	66053722	66053824	100	+	.	Parent=FBgn0011737.2.mrna1;Target=FBgn0011737.2 617 719 +
ChrX	stalkie_big_nohaplotig	exon	66069230	66069934	100	+	.	Parent=FBgn0011737.2.mrna1;Target=FBgn0011737.2 720 1424 +
ChrX	stalkie_big_nohaplotig	exon	66070761	66070894	100	+	.	Parent=FBgn0011737.2.mrna1;Target=FBgn0011737.2 1425 1558 +
ChrX	stalkie_big_nohaplotig	exon	66070967	66071130	100	+	.	Parent=FBgn0011737.2.mrna1;Target=FBgn0011737.2 1559 1722 +
ChrX	stalkie_big_nohaplotig	CDS	66052673	66053090	.	+	0	Parent=FBgn0011737.2.mrna1;Target=FBgn0011737.2 1 418 +
ChrX	stalkie_big_nohaplotig	CDS	66053146	66053343	.	+	2	Parent=FBgn0011737.2.mrna1;Target=FBgn0011737.2 419 616 +
ChrX	stalkie_big_nohaplotig	CDS	66053722	66053824	.	+	2	Parent=FBgn0011737.2.mrna1;Target=FBgn0011737.2 617 719 +
ChrX	stalkie_big_nohaplotig	CDS	66069230	66069934	.	+	1	Parent=FBgn0011737.2.mrna1;Target=FBgn0011737.2 720 1424 +
ChrX	stalkie_big_nohaplotig	CDS	66070761	66070894	.	+	1	Parent=FBgn0011737.2.mrna1;Target=FBgn0011737.2 1425 1558 +
ChrX	stalkie_big_nohaplotig	CDS	66070967	66071130	.	+	2	Parent=FBgn0011737.2.mrna1;Target=FBgn0011737.2 1559 1722 +
ChrX	stalkie_big_nohaplotig	mRNA	66067859	66071130	.	+	.	ID=FBgn0011737.1.mrna1;geneID=FBgn0011737.1.path1;Name=FBgn0011737.1;Dir=sensecoverage=100.0;identity=98.5;matches=1693;mismatches=26;indels=0;unknowns=0;locus=RLOC_00003794
ChrX	stalkie_big_nohaplotig	exon	66067859	66068273	100	+	.	Parent=FBgn0011737.1.mrna1;Target=FBgn0011737.1 1 415 +
ChrX	stalkie_big_nohaplotig	exon	66068328	66068525	100	+	.	Parent=FBgn0011737.1.mrna1;Target=FBgn0011737.1 416 613 +
ChrX	stalkie_big_nohaplotig	exon	66069070	66069172	100	+	.	Parent=FBgn0011737.1.mrna1;Target=FBgn0011737.1 614 716 +
ChrX	stalkie_big_nohaplotig	exon	66069230	66069934	100	+	.	Parent=FBgn0011737.1.mrna1;Target=FBgn0011737.1 717 1421 +
ChrX	stalkie_big_nohaplotig	exon	66070761	66070894	85	+	.	Parent=FBgn0011737.1.mrna1;Target=FBgn0011737.1 1422 1555 +
ChrX	stalkie_big_nohaplotig	exon	66070967	66071130	96	+	.	Parent=FBgn0011737.1.mrna1;Target=FBgn0011737.1 1556 1719 +
ChrX	stalkie_big_nohaplotig	CDS	66067859	66068273	.	+	0	Parent=FBgn0011737.1.mrna1;Target=FBgn0011737.1 1 415 +
ChrX	stalkie_big_nohaplotig	CDS	66068328	66068525	.	+	2	Parent=FBgn0011737.1.mrna1;Target=FBgn0011737.1 416 613 +
ChrX	stalkie_big_nohaplotig	CDS	66069070	66069172	.	+	2	Parent=FBgn0011737.1.mrna1;Target=FBgn0011737.1 614 716 +
ChrX	stalkie_big_nohaplotig	CDS	66069230	66069934	.	+	1	Parent=FBgn0011737.1.mrna1;Target=FBgn0011737.1 717 1421 +
ChrX	stalkie_big_nohaplotig	CDS	66070761	66070894	.	+	1	Parent=FBgn0011737.1.mrna1;Target=FBgn0011737.1 1422 1555 +
ChrX	stalkie_big_nohaplotig	CDS	66070967	66071130	.	+	2	Parent=FBgn0011737.1.mrna1;Target=FBgn0011737.1 1556 1719 +
ChrX	gffcl	locus	66073880	66084170	.	-	.	ID=RLOC_00003795;geneIDs=FBgn0262117.1.path1,comp72895_c0_seq1.path1;transcripts=FBgn0262117.1.mrna1,comp72895_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66073880	66084170	.	-	.	ID=FBgn0262117.1.mrna1;geneID=FBgn0262117.1.path1;Name=FBgn0262117.1;Dir=sensecoverage=100.0;identity=100.0;matches=3456;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003795
ChrX	stalkie_big_nohaplotig	exon	66073880	66073942	100	-	.	Parent=FBgn0262117.1.mrna1;Target=FBgn0262117.1 3394 3456 +
ChrX	stalkie_big_nohaplotig	exon	66074013	66074201	100	-	.	Parent=FBgn0262117.1.mrna1;Target=FBgn0262117.1 3205 3393 +
ChrX	stalkie_big_nohaplotig	exon	66074273	66074398	100	-	.	Parent=FBgn0262117.1.mrna1;Target=FBgn0262117.1 3079 3204 +
ChrX	stalkie_big_nohaplotig	exon	66078627	66078774	100	-	.	Parent=FBgn0262117.1.mrna1;Target=FBgn0262117.1 2931 3078 +
ChrX	stalkie_big_nohaplotig	exon	66078844	66079001	100	-	.	Parent=FBgn0262117.1.mrna1;Target=FBgn0262117.1 2773 2930 +
ChrX	stalkie_big_nohaplotig	exon	66079079	66079897	100	-	.	Parent=FBgn0262117.1.mrna1;Target=FBgn0262117.1 1954 2772 +
ChrX	stalkie_big_nohaplotig	exon	66081136	66081744	100	-	.	Parent=FBgn0262117.1.mrna1;Target=FBgn0262117.1 1345 1953 +
ChrX	stalkie_big_nohaplotig	exon	66081981	66082614	100	-	.	Parent=FBgn0262117.1.mrna1;Target=FBgn0262117.1 711 1344 +
ChrX	stalkie_big_nohaplotig	exon	66082677	66083287	100	-	.	Parent=FBgn0262117.1.mrna1;Target=FBgn0262117.1 100 710 +
ChrX	stalkie_big_nohaplotig	exon	66084072	66084170	100	-	.	Parent=FBgn0262117.1.mrna1;Target=FBgn0262117.1 1 99 +
ChrX	stalkie_big_nohaplotig	CDS	66073880	66073942	.	-	0	Parent=FBgn0262117.1.mrna1;Target=FBgn0262117.1 3394 3456 +
ChrX	stalkie_big_nohaplotig	CDS	66074013	66074201	.	-	0	Parent=FBgn0262117.1.mrna1;Target=FBgn0262117.1 3205 3393 +
ChrX	stalkie_big_nohaplotig	CDS	66074273	66074398	.	-	0	Parent=FBgn0262117.1.mrna1;Target=FBgn0262117.1 3079 3204 +
ChrX	stalkie_big_nohaplotig	CDS	66078627	66078774	.	-	1	Parent=FBgn0262117.1.mrna1;Target=FBgn0262117.1 2931 3078 +
ChrX	stalkie_big_nohaplotig	CDS	66078844	66079001	.	-	0	Parent=FBgn0262117.1.mrna1;Target=FBgn0262117.1 2773 2930 +
ChrX	stalkie_big_nohaplotig	CDS	66079079	66079897	.	-	0	Parent=FBgn0262117.1.mrna1;Target=FBgn0262117.1 1954 2772 +
ChrX	stalkie_big_nohaplotig	CDS	66081136	66081744	.	-	0	Parent=FBgn0262117.1.mrna1;Target=FBgn0262117.1 1345 1953 +
ChrX	stalkie_big_nohaplotig	CDS	66081981	66082614	.	-	1	Parent=FBgn0262117.1.mrna1;Target=FBgn0262117.1 711 1344 +
ChrX	stalkie_big_nohaplotig	CDS	66082677	66083287	.	-	0	Parent=FBgn0262117.1.mrna1;Target=FBgn0262117.1 100 710 +
ChrX	stalkie_big_nohaplotig	CDS	66084072	66084170	.	-	0	Parent=FBgn0262117.1.mrna1;Target=FBgn0262117.1 1 99 +
ChrX	stalkie_big_nohaplotig	mRNA	66076759	66078649	.	-	.	ID=comp72895_c0_seq1.mrna1;geneID=comp72895_c0_seq1.path1;Name=comp72895_c0_seq1;Dir=antisensecoverage=93.3;identity=99.6;matches=237;mismatches=0;indels=1;unknowns=0;Target=comp72895_c0_seq1 69 167 .;locus=RLOC_00003795
ChrX	stalkie_big_nohaplotig	exon	66076759	66076972	99	-	.	Parent=comp72895_c0_seq1.mrna1;Target=comp72895_c0_seq1 18 232 -
ChrX	stalkie_big_nohaplotig	exon	66078627	66078649	100	-	.	Parent=comp72895_c0_seq1.mrna1;Target=comp72895_c0_seq1 233 255 -
ChrX	stalkie_big_nohaplotig	CDS	66076810	66076907	.	-	0	Parent=comp72895_c0_seq1.mrna1
ChrX	gffcl	locus	66095941	66097853	.	+	.	ID=RLOC_00003796;geneIDs=FBgn0031320.1.path1;transcripts=FBgn0031320.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66095941	66097853	.	+	.	ID=FBgn0031320.1.mrna1;geneID=FBgn0031320.1.path1;Name=FBgn0031320.1;Dir=sensecoverage=100.0;identity=100.0;matches=1464;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003796
ChrX	stalkie_big_nohaplotig	exon	66095941	66095967	100	+	.	Parent=FBgn0031320.1.mrna1;Target=FBgn0031320.1 1 27 +
ChrX	stalkie_big_nohaplotig	exon	66096180	66096370	100	+	.	Parent=FBgn0031320.1.mrna1;Target=FBgn0031320.1 28 218 +
ChrX	stalkie_big_nohaplotig	exon	66096428	66096639	100	+	.	Parent=FBgn0031320.1.mrna1;Target=FBgn0031320.1 219 430 +
ChrX	stalkie_big_nohaplotig	exon	66096703	66097289	100	+	.	Parent=FBgn0031320.1.mrna1;Target=FBgn0031320.1 431 1017 +
ChrX	stalkie_big_nohaplotig	exon	66097349	66097551	100	+	.	Parent=FBgn0031320.1.mrna1;Target=FBgn0031320.1 1018 1220 +
ChrX	stalkie_big_nohaplotig	exon	66097610	66097853	100	+	.	Parent=FBgn0031320.1.mrna1;Target=FBgn0031320.1 1221 1464 +
ChrX	stalkie_big_nohaplotig	CDS	66095941	66095967	.	+	0	Parent=FBgn0031320.1.mrna1;Target=FBgn0031320.1 1 27 +
ChrX	stalkie_big_nohaplotig	CDS	66096180	66096370	.	+	0	Parent=FBgn0031320.1.mrna1;Target=FBgn0031320.1 28 218 +
ChrX	stalkie_big_nohaplotig	CDS	66096428	66096639	.	+	1	Parent=FBgn0031320.1.mrna1;Target=FBgn0031320.1 219 430 +
ChrX	stalkie_big_nohaplotig	CDS	66096703	66097289	.	+	2	Parent=FBgn0031320.1.mrna1;Target=FBgn0031320.1 431 1017 +
ChrX	stalkie_big_nohaplotig	CDS	66097349	66097551	.	+	0	Parent=FBgn0031320.1.mrna1;Target=FBgn0031320.1 1018 1220 +
ChrX	stalkie_big_nohaplotig	CDS	66097610	66097853	.	+	1	Parent=FBgn0031320.1.mrna1;Target=FBgn0031320.1 1221 1464 +
ChrX	gffcl	locus	66100299	66106391	.	+	.	ID=RLOC_00003797;geneIDs=FBgn0036299.1.path2,comp161770_c1_seq1.path1;transcripts=comp161770_c1_seq1.mrna1,FBgn0036299.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	66100299	66106391	.	+	.	ID=comp161770_c1_seq1.mrna1;geneID=comp161770_c1_seq1.path1;Name=comp161770_c1_seq1;Dir=antisensecoverage=97.7;identity=98.5;matches=3519;mismatches=43;indels=9;unknowns=0;locus=RLOC_00003797
ChrX	stalkie_big_nohaplotig	exon	66100299	66100569	92	+	.	Parent=comp161770_c1_seq1.mrna1;Target=comp161770_c1_seq1 3292 3562 -
ChrX	stalkie_big_nohaplotig	exon	66100601	66100643	97	+	.	Parent=comp161770_c1_seq1.mrna1;Target=comp161770_c1_seq1 3249 3291 -
ChrX	stalkie_big_nohaplotig	exon	66101083	66101453	96	+	.	Parent=comp161770_c1_seq1.mrna1;Target=comp161770_c1_seq1 2878 3248 -
ChrX	stalkie_big_nohaplotig	exon	66101844	66102271	99	+	.	Parent=comp161770_c1_seq1.mrna1;Target=comp161770_c1_seq1 2450 2877 -
ChrX	stalkie_big_nohaplotig	exon	66102337	66102470	100	+	.	Parent=comp161770_c1_seq1.mrna1;Target=comp161770_c1_seq1 2316 2449 -
ChrX	stalkie_big_nohaplotig	exon	66103772	66103932	100	+	.	Parent=comp161770_c1_seq1.mrna1;Target=comp161770_c1_seq1 2155 2315 -
ChrX	stalkie_big_nohaplotig	exon	66103998	66104506	97	+	.	Parent=comp161770_c1_seq1.mrna1;Target=comp161770_c1_seq1 1655 2154 -
ChrX	stalkie_big_nohaplotig	exon	66104572	66104736	99	+	.	Parent=comp161770_c1_seq1.mrna1;Target=comp161770_c1_seq1 1490 1654 -
ChrX	stalkie_big_nohaplotig	exon	66104839	66105505	99	+	.	Parent=comp161770_c1_seq1.mrna1;Target=comp161770_c1_seq1 823 1489 -
ChrX	stalkie_big_nohaplotig	exon	66105570	66106391	99	+	.	Parent=comp161770_c1_seq1.mrna1;Target=comp161770_c1_seq1 1 822 -
ChrX	stalkie_big_nohaplotig	CDS	66101396	66101453	.	+	0	Parent=comp161770_c1_seq1.mrna1;Target=comp161770_c1_seq1 2878 2935 .
ChrX	stalkie_big_nohaplotig	CDS	66101844	66102271	.	+	2	Parent=comp161770_c1_seq1.mrna1;Target=comp161770_c1_seq1 2450 2877 .
ChrX	stalkie_big_nohaplotig	CDS	66102337	66102470	.	+	0	Parent=comp161770_c1_seq1.mrna1;Target=comp161770_c1_seq1 2316 2449 .
ChrX	stalkie_big_nohaplotig	CDS	66103772	66103932	.	+	1	Parent=comp161770_c1_seq1.mrna1;Target=comp161770_c1_seq1 2155 2315 .
ChrX	stalkie_big_nohaplotig	CDS	66103998	66104506	.	+	2	Parent=comp161770_c1_seq1.mrna1;Target=comp161770_c1_seq1 1655 2154 .
ChrX	stalkie_big_nohaplotig	CDS	66104572	66104736	.	+	0	Parent=comp161770_c1_seq1.mrna1;Target=comp161770_c1_seq1 1490 1654 .
ChrX	stalkie_big_nohaplotig	CDS	66104839	66105505	.	+	0	Parent=comp161770_c1_seq1.mrna1;Target=comp161770_c1_seq1 823 1489 .
ChrX	stalkie_big_nohaplotig	CDS	66105570	66105970	.	+	2	Parent=comp161770_c1_seq1.mrna1;Target=comp161770_c1_seq1 422 822 .
ChrX	stalkie_big_nohaplotig	mRNA	66100479	66105967	.	+	.	ID=FBgn0036299.1.mrna2;geneID=FBgn0036299.1.path2;Name=FBgn0036299.1;Dir=sensecoverage=100.0;identity=99.2;matches=2523;mismatches=12;indels=9;unknowns=0;locus=RLOC_00003797
ChrX	stalkie_big_nohaplotig	exon	66100479	66100560	97	+	.	Parent=FBgn0036299.1.mrna2;Target=FBgn0036299.1 1 82 +
ChrX	stalkie_big_nohaplotig	exon	66101844	66102271	99	+	.	Parent=FBgn0036299.1.mrna2;Target=FBgn0036299.1 83 510 +
ChrX	stalkie_big_nohaplotig	exon	66102337	66102470	100	+	.	Parent=FBgn0036299.1.mrna2;Target=FBgn0036299.1 511 644 +
ChrX	stalkie_big_nohaplotig	exon	66103772	66103932	100	+	.	Parent=FBgn0036299.1.mrna2;Target=FBgn0036299.1 645 805 +
ChrX	stalkie_big_nohaplotig	exon	66103998	66104506	97	+	.	Parent=FBgn0036299.1.mrna2;Target=FBgn0036299.1 806 1305 +
ChrX	stalkie_big_nohaplotig	exon	66104572	66104736	99	+	.	Parent=FBgn0036299.1.mrna2;Target=FBgn0036299.1 1306 1470 +
ChrX	stalkie_big_nohaplotig	exon	66104839	66105505	99	+	.	Parent=FBgn0036299.1.mrna2;Target=FBgn0036299.1 1471 2137 +
ChrX	stalkie_big_nohaplotig	exon	66105570	66105967	100	+	.	Parent=FBgn0036299.1.mrna2;Target=FBgn0036299.1 2138 2535 +
ChrX	stalkie_big_nohaplotig	CDS	66100479	66100560	.	+	0	Parent=FBgn0036299.1.mrna2;Target=FBgn0036299.1 1 82 +
ChrX	stalkie_big_nohaplotig	CDS	66101844	66102271	.	+	2	Parent=FBgn0036299.1.mrna2;Target=FBgn0036299.1 83 510 +
ChrX	stalkie_big_nohaplotig	CDS	66102337	66102470	.	+	0	Parent=FBgn0036299.1.mrna2;Target=FBgn0036299.1 511 644 +
ChrX	stalkie_big_nohaplotig	CDS	66103772	66103932	.	+	1	Parent=FBgn0036299.1.mrna2;Target=FBgn0036299.1 645 805 +
ChrX	stalkie_big_nohaplotig	CDS	66103998	66104506	.	+	2	Parent=FBgn0036299.1.mrna2;Target=FBgn0036299.1 806 1305 +
ChrX	stalkie_big_nohaplotig	CDS	66104572	66104736	.	+	0	Parent=FBgn0036299.1.mrna2;Target=FBgn0036299.1 1306 1470 +
ChrX	stalkie_big_nohaplotig	CDS	66104839	66105505	.	+	0	Parent=FBgn0036299.1.mrna2;Target=FBgn0036299.1 1471 2137 +
ChrX	stalkie_big_nohaplotig	CDS	66105570	66105967	.	+	2	Parent=FBgn0036299.1.mrna2;Target=FBgn0036299.1 2138 2535 +
ChrX	gffcl	locus	66112325	66113112	.	+	.	ID=RLOC_00003798;geneIDs=comp152172_c0_seq1.path1;transcripts=comp152172_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66112325	66113112	.	+	.	ID=comp152172_c0_seq1.mrna1;geneID=comp152172_c0_seq1.path1;Name=comp152172_c0_seq1;Dir=indeterminatecoverage=98.1;identity=99.5;matches=784;mismatches=4;indels=0;unknowns=0;Target=comp152172_c0_seq1 794 7 .;CDS_Target=comp152172_c0_seq1 747 484 .;locus=RLOC_00003798
ChrX	stalkie_big_nohaplotig	exon	66112325	66113112	99	+	.	Parent=comp152172_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	66112802	66113065	.	+	0	Parent=comp152172_c0_seq1.mrna1
ChrX	gffcl	locus	66113736	66114237	.	-	.	ID=RLOC_00003799;geneIDs=comp149592_c0_seq1.path1;transcripts=comp149592_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66113736	66114237	.	-	.	ID=comp149592_c0_seq1.mrna1;geneID=comp149592_c0_seq1.path1;Name=comp149592_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.6;matches=470;mismatches=9;indels=23;unknowns=0;Target=comp149592_c0_seq1 479 1 .;CDS_Target=comp149592_c0_seq1 169 2 .;locus=RLOC_00003799
ChrX	stalkie_big_nohaplotig	exon	66113736	66114237	93	-	.	Parent=comp149592_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	66114069	66114236	.	-	0	Parent=comp149592_c0_seq1.mrna1
ChrX	gffcl	locus	66115695	66116336	.	+	.	ID=RLOC_00003800;geneIDs=comp136236_c0_seq1.path1;transcripts=comp136236_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66115695	66116336	.	+	.	ID=comp136236_c0_seq1.mrna1;geneID=comp136236_c0_seq1.path1;Name=comp136236_c0_seq1;Dir=indeterminatecoverage=98.0;identity=98.9;matches=636;mismatches=3;indels=4;unknowns=0;Target=comp136236_c0_seq1 653 14 .;CDS_Target=comp136236_c0_seq1 514 119 .;locus=RLOC_00003800
ChrX	stalkie_big_nohaplotig	exon	66115695	66116336	98	+	.	Parent=comp136236_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	66115802	66116197	.	+	0	Parent=comp136236_c0_seq1.mrna1
ChrX	gffcl	locus	66116970	66117850	.	-	.	ID=RLOC_00003801;geneIDs=comp76979_c0_seq1.path1;transcripts=comp76979_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66116970	66117850	.	-	.	ID=comp76979_c0_seq1.mrna1;geneID=comp76979_c0_seq1.path1;Name=comp76979_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.5;matches=877;mismatches=4;indels=0;unknowns=0;Target=comp76979_c0_seq1 882 2 .;CDS_Target=comp76979_c0_seq1 881 660 .;locus=RLOC_00003801
ChrX	stalkie_big_nohaplotig	exon	66116970	66117850	99	-	.	Parent=comp76979_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	66116971	66117192	.	-	0	Parent=comp76979_c0_seq1.mrna1
ChrX	gffcl	locus	66170570	66171368	.	+	.	ID=RLOC_00003802;geneIDs=comp157799_c0_seq1.path1;transcripts=comp157799_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66170570	66171368	.	+	.	ID=comp157799_c0_seq1.mrna1;geneID=comp157799_c0_seq1.path1;Name=comp157799_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=796;mismatches=3;indels=0;unknowns=0;Target=comp157799_c0_seq1 799 1 .;CDS_Target=comp157799_c0_seq1 291 229 .;locus=RLOC_00003802
ChrX	stalkie_big_nohaplotig	exon	66170570	66171368	99	+	.	Parent=comp157799_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	66170798	66170860	.	+	0	Parent=comp157799_c0_seq1.mrna1
ChrX	gffcl	locus	66176658	66178598	.	+	.	ID=RLOC_00003803;geneIDs=comp163611_c0_seq1.path6;transcripts=comp163611_c0_seq1.mrna6
ChrX	stalkie_big_nohaplotig	mRNA	66176658	66178598	.	+	.	ID=comp163611_c0_seq1.mrna6;geneID=comp163611_c0_seq1.path6;Name=comp163611_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1933;mismatches=8;indels=0;unknowns=0;Target=comp163611_c0_seq1 1941 1 .;locus=RLOC_00003803
ChrX	stalkie_big_nohaplotig	exon	66176658	66178598	99	+	.	Parent=comp163611_c0_seq1.mrna6
ChrX	stalkie_big_nohaplotig	CDS	66176658	66178598	.	+	0	Parent=comp163611_c0_seq1.mrna6
ChrX	gffcl	locus	66183384	66183524	.	+	.	ID=RLOC_00003804;geneIDs=comp158532_c2_seq1.path1;transcripts=comp158532_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66183384	66183524	.	+	.	ID=comp158532_c2_seq1.mrna1;geneID=comp158532_c2_seq1.path1;Name=comp158532_c2_seq1;Dir=indeterminatecoverage=17.5;identity=99.3;matches=140;mismatches=1;indels=0;unknowns=0;Target=comp158532_c2_seq1 141 1 .;locus=RLOC_00003804
ChrX	stalkie_big_nohaplotig	exon	66183384	66183524	99	+	.	Parent=comp158532_c2_seq1.mrna1
ChrX	gffcl	locus	66186517	66187246	.	-	.	ID=RLOC_00003805;geneIDs=comp150175_c0_seq1.path1;transcripts=comp150175_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66186517	66187246	.	-	.	ID=comp150175_c0_seq1.mrna1;geneID=comp150175_c0_seq1.path1;Name=comp150175_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=728;mismatches=2;indels=0;unknowns=0;Target=comp150175_c0_seq1 730 1 .;CDS_Target=comp150175_c0_seq1 450 295 .;locus=RLOC_00003805
ChrX	stalkie_big_nohaplotig	exon	66186517	66187246	99	-	.	Parent=comp150175_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	66186797	66186952	.	-	0	Parent=comp150175_c0_seq1.mrna1
ChrX	gffcl	locus	66230768	66235071	.	-	.	ID=RLOC_00003806;geneIDs=FBgn0032814.2.path1;transcripts=FBgn0032814.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66230768	66235071	.	-	.	ID=FBgn0032814.2.mrna1;geneID=FBgn0032814.2.path1;Name=FBgn0032814.2;Dir=sensecoverage=100.0;identity=100.0;matches=2484;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003806
ChrX	stalkie_big_nohaplotig	exon	66230768	66231437	100	-	.	Parent=FBgn0032814.2.mrna1;Target=FBgn0032814.2 1815 2484 +
ChrX	stalkie_big_nohaplotig	exon	66232761	66233116	100	-	.	Parent=FBgn0032814.2.mrna1;Target=FBgn0032814.2 1459 1814 +
ChrX	stalkie_big_nohaplotig	exon	66233190	66234365	100	-	.	Parent=FBgn0032814.2.mrna1;Target=FBgn0032814.2 283 1458 +
ChrX	stalkie_big_nohaplotig	exon	66234790	66235071	100	-	.	Parent=FBgn0032814.2.mrna1;Target=FBgn0032814.2 1 282 +
ChrX	stalkie_big_nohaplotig	CDS	66230768	66231437	.	-	1	Parent=FBgn0032814.2.mrna1;Target=FBgn0032814.2 1815 2484 +
ChrX	stalkie_big_nohaplotig	CDS	66232761	66233116	.	-	0	Parent=FBgn0032814.2.mrna1;Target=FBgn0032814.2 1459 1814 +
ChrX	stalkie_big_nohaplotig	CDS	66233190	66234365	.	-	0	Parent=FBgn0032814.2.mrna1;Target=FBgn0032814.2 283 1458 +
ChrX	stalkie_big_nohaplotig	CDS	66234790	66235071	.	-	0	Parent=FBgn0032814.2.mrna1;Target=FBgn0032814.2 1 282 +
ChrX	gffcl	locus	66237927	66241227	.	+	.	ID=RLOC_00003807;geneIDs=FBgn0032814.1.path1;transcripts=FBgn0032814.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66237927	66241227	.	+	.	ID=FBgn0032814.1.mrna1;geneID=FBgn0032814.1.path1;Name=FBgn0032814.1;Dir=sensecoverage=100.0;identity=99.9;matches=2032;mismatches=1;indels=1;unknowns=0;Target=FBgn0032814.1 3 11 +;locus=RLOC_00003807
ChrX	stalkie_big_nohaplotig	exon	66237927	66238111	99	+	.	Parent=FBgn0032814.1.mrna1;Target=FBgn0032814.1 1 186 +
ChrX	stalkie_big_nohaplotig	exon	66238172	66239395	99	+	.	Parent=FBgn0032814.1.mrna1;Target=FBgn0032814.1 187 1410 +
ChrX	stalkie_big_nohaplotig	exon	66239454	66239806	100	+	.	Parent=FBgn0032814.1.mrna1;Target=FBgn0032814.1 1411 1763 +
ChrX	stalkie_big_nohaplotig	exon	66240957	66241227	100	+	.	Parent=FBgn0032814.1.mrna1;Target=FBgn0032814.1 1764 2034 +
ChrX	stalkie_big_nohaplotig	CDS	66237929	66237936	.	+	0	Parent=FBgn0032814.1.mrna1
ChrX	gffcl	locus	66242581	66248271	.	-	.	ID=RLOC_00003808;geneIDs=FBgn0053003.1.path1;transcripts=FBgn0053003.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66242581	66248271	.	-	.	ID=FBgn0053003.1.mrna1;geneID=FBgn0053003.1.path1;Name=FBgn0053003.1;Dir=sensecoverage=100.0;identity=99.9;matches=1927;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003808
ChrX	stalkie_big_nohaplotig	exon	66242581	66242718	100	-	.	Parent=FBgn0053003.1.mrna1;Target=FBgn0053003.1 1792 1929 +
ChrX	stalkie_big_nohaplotig	exon	66242788	66243197	100	-	.	Parent=FBgn0053003.1.mrna1;Target=FBgn0053003.1 1382 1791 +
ChrX	stalkie_big_nohaplotig	exon	66243431	66243631	100	-	.	Parent=FBgn0053003.1.mrna1;Target=FBgn0053003.1 1181 1381 +
ChrX	stalkie_big_nohaplotig	exon	66243696	66244280	99	-	.	Parent=FBgn0053003.1.mrna1;Target=FBgn0053003.1 596 1180 +
ChrX	stalkie_big_nohaplotig	exon	66244371	66244795	99	-	.	Parent=FBgn0053003.1.mrna1;Target=FBgn0053003.1 171 595 +
ChrX	stalkie_big_nohaplotig	exon	66248102	66248271	100	-	.	Parent=FBgn0053003.1.mrna1;Target=FBgn0053003.1 1 170 +
ChrX	stalkie_big_nohaplotig	CDS	66242581	66242718	.	-	0	Parent=FBgn0053003.1.mrna1;Target=FBgn0053003.1 1792 1929 +
ChrX	stalkie_big_nohaplotig	CDS	66242788	66243197	.	-	2	Parent=FBgn0053003.1.mrna1;Target=FBgn0053003.1 1382 1791 +
ChrX	stalkie_big_nohaplotig	CDS	66243431	66243631	.	-	2	Parent=FBgn0053003.1.mrna1;Target=FBgn0053003.1 1181 1381 +
ChrX	stalkie_big_nohaplotig	CDS	66243696	66244280	.	-	2	Parent=FBgn0053003.1.mrna1;Target=FBgn0053003.1 596 1180 +
ChrX	stalkie_big_nohaplotig	CDS	66244371	66244795	.	-	1	Parent=FBgn0053003.1.mrna1;Target=FBgn0053003.1 171 595 +
ChrX	stalkie_big_nohaplotig	CDS	66248102	66248271	.	-	0	Parent=FBgn0053003.1.mrna1;Target=FBgn0053003.1 1 170 +
ChrX	gffcl	locus	66363619	66373716	.	+	.	ID=RLOC_00003809;geneIDs=FBgn0032399.path1;transcripts=FBgn0032399.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66363619	66373716	.	+	.	ID=FBgn0032399.mrna1;geneID=FBgn0032399.path1;Name=FBgn0032399;Dir=sensecoverage=100.0;identity=100.0;matches=576;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003809
ChrX	stalkie_big_nohaplotig	exon	66363619	66363897	100	+	.	Parent=FBgn0032399.mrna1;Target=FBgn0032399 1 279 +
ChrX	stalkie_big_nohaplotig	exon	66373420	66373716	100	+	.	Parent=FBgn0032399.mrna1;Target=FBgn0032399 280 576 +
ChrX	stalkie_big_nohaplotig	CDS	66363619	66363897	.	+	0	Parent=FBgn0032399.mrna1;Target=FBgn0032399 1 279 +
ChrX	stalkie_big_nohaplotig	CDS	66373420	66373716	.	+	0	Parent=FBgn0032399.mrna1;Target=FBgn0032399 280 576 +
ChrX	gffcl	locus	66377442	66380278	.	+	.	ID=RLOC_00003810;geneIDs=ORF702.path1;transcripts=ORF702.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66377442	66380278	.	+	.	ID=ORF702.mrna1;geneID=ORF702.path1;Name=ORF702;Dir=sensecoverage=100.0;identity=99.9;matches=1508;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003810
ChrX	stalkie_big_nohaplotig	exon	66377442	66377664	100	+	.	Parent=ORF702.mrna1;Target=ORF702 1 223 +
ChrX	stalkie_big_nohaplotig	exon	66378038	66378148	100	+	.	Parent=ORF702.mrna1;Target=ORF702 224 334 +
ChrX	stalkie_big_nohaplotig	exon	66379104	66380278	99	+	.	Parent=ORF702.mrna1;Target=ORF702 335 1509 +
ChrX	stalkie_big_nohaplotig	CDS	66377442	66377664	.	+	0	Parent=ORF702.mrna1;Target=ORF702 1 223 +
ChrX	stalkie_big_nohaplotig	CDS	66378038	66378148	.	+	2	Parent=ORF702.mrna1;Target=ORF702 224 334 +
ChrX	stalkie_big_nohaplotig	CDS	66379104	66380278	.	+	2	Parent=ORF702.mrna1;Target=ORF702 335 1509 +
ChrX	gffcl	locus	66384528	68304548	.	-	.	ID=RLOC_00003811;geneIDs=comp117464_c0_seq1.path1;transcripts=comp117464_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66384528	68304548	.	-	.	ID=comp117464_c0_seq1.mrna1;geneID=comp117464_c0_seq1.path1;Name=comp117464_c0_seq1;Dir=indeterminatecoverage=94.1;identity=100.0;matches=506;mismatches=0;indels=0;unknowns=0;Target=comp117464_c0_seq1 84 1 .;locus=RLOC_00003811
ChrX	stalkie_big_nohaplotig	exon	66384528	66384531	100	-	.	Parent=comp117464_c0_seq1.mrna1;Target=comp117464_c0_seq1 506 503 .
ChrX	stalkie_big_nohaplotig	exon	66396740	66396750	100	-	.	Parent=comp117464_c0_seq1.mrna1;Target=comp117464_c0_seq1 502 492 .
ChrX	stalkie_big_nohaplotig	exon	66402821	66402822	100	-	.	Parent=comp117464_c0_seq1.mrna1;Target=comp117464_c0_seq1 491 490 .
ChrX	stalkie_big_nohaplotig	exon	68304060	68304548	100	-	.	Parent=comp117464_c0_seq1.mrna1;Target=comp117464_c0_seq1 489 1 .
ChrX	stalkie_big_nohaplotig	CDS	68304465	68304548	.	-	0	Parent=comp117464_c0_seq1.mrna1
ChrX	gffcl	locus	66519673	66521217	.	-	.	ID=RLOC_00003813;geneIDs=comp155734_c0_seq1.path1;transcripts=comp155734_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66519673	66521217	.	-	.	ID=comp155734_c0_seq1.mrna1;geneID=comp155734_c0_seq1.path1;Name=comp155734_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1545;mismatches=0;indels=1;unknowns=0;Target=comp155734_c0_seq1 1546 1 .;CDS_Target=comp155734_c0_seq1 904 764 .;locus=RLOC_00003813
ChrX	stalkie_big_nohaplotig	exon	66519673	66521217	99	-	.	Parent=comp155734_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	66520315	66520455	.	-	0	Parent=comp155734_c0_seq1.mrna1
ChrX	gffcl	locus	66587979	66588913	.	-	.	ID=RLOC_00003815;geneIDs=comp138848_c1_seq1.path1;transcripts=comp138848_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66587979	66588913	.	-	.	ID=comp138848_c1_seq1.mrna1;geneID=comp138848_c1_seq1.path1;Name=comp138848_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=931;mismatches=4;indels=0;unknowns=0;Target=comp138848_c1_seq1 935 1 .;CDS_Target=comp138848_c1_seq1 110 3 .;locus=RLOC_00003815
ChrX	stalkie_big_nohaplotig	exon	66587979	66588913	99	-	.	Parent=comp138848_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	66588804	66588911	.	-	0	Parent=comp138848_c1_seq1.mrna1
ChrX	gffcl	locus	66589659	66590861	.	-	.	ID=RLOC_00003816;geneIDs=ORF1163.path1;transcripts=ORF1163.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66589659	66590861	.	-	.	ID=ORF1163.mrna1;geneID=ORF1163.path1;Name=ORF1163;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1195;mismatches=8;indels=0;unknowns=0;Target=ORF1163 1203 1 .;locus=RLOC_00003816
ChrX	stalkie_big_nohaplotig	exon	66589659	66590861	99	-	.	Parent=ORF1163.mrna1
ChrX	stalkie_big_nohaplotig	CDS	66589659	66590861	.	-	0	Parent=ORF1163.mrna1
ChrX	gffcl	locus	66593140	66593636	.	-	.	ID=RLOC_00003817;geneIDs=comp162396_c0_seq1.path1;transcripts=comp162396_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66593140	66593636	.	-	.	ID=comp162396_c0_seq1.mrna1;geneID=comp162396_c0_seq1.path1;Name=comp162396_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=494;mismatches=3;indels=0;unknowns=0;Target=comp162396_c0_seq1 497 1 .;CDS_Target=comp162396_c0_seq1 350 3 .;locus=RLOC_00003817
ChrX	stalkie_big_nohaplotig	exon	66593140	66593636	99	-	.	Parent=comp162396_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	66593287	66593634	.	-	0	Parent=comp162396_c0_seq1.mrna1
ChrX	gffcl	locus	66596038	66597092	.	+	.	ID=RLOC_00003818;geneIDs=comp84482_c0_seq1.path1;transcripts=comp84482_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66596038	66597092	.	+	.	ID=comp84482_c0_seq1.mrna1;geneID=comp84482_c0_seq1.path1;Name=comp84482_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1055;mismatches=0;indels=0;unknowns=0;Target=comp84482_c0_seq1 1055 1 .;CDS_Target=comp84482_c0_seq1 565 449 .;locus=RLOC_00003818
ChrX	stalkie_big_nohaplotig	exon	66596038	66597092	100	+	.	Parent=comp84482_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	66596486	66596602	.	+	0	Parent=comp84482_c0_seq1.mrna1
ChrX	gffcl	locus	66599747	66601655	.	-	.	ID=RLOC_00003819;geneIDs=comp157248_c0_seq1.path1;transcripts=comp157248_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66599747	66601655	.	-	.	ID=comp157248_c0_seq1.mrna1;geneID=comp157248_c0_seq1.path1;Name=comp157248_c0_seq1;Dir=sensecoverage=93.7;identity=99.8;matches=1397;mismatches=2;indels=1;unknowns=0;Target=comp157248_c0_seq1 297 977 +;locus=RLOC_00003819
ChrX	stalkie_big_nohaplotig	exon	66599747	66600044	99	-	.	Parent=comp157248_c0_seq1.mrna1;Target=comp157248_c0_seq1 1175 1472 +
ChrX	stalkie_big_nohaplotig	exon	66600129	66600272	100	-	.	Parent=comp157248_c0_seq1.mrna1;Target=comp157248_c0_seq1 1031 1174 +
ChrX	stalkie_big_nohaplotig	exon	66600620	66600672	100	-	.	Parent=comp157248_c0_seq1.mrna1;Target=comp157248_c0_seq1 978 1030 +
ChrX	stalkie_big_nohaplotig	exon	66600752	66601655	99	-	.	Parent=comp157248_c0_seq1.mrna1;Target=comp157248_c0_seq1 73 977 +
ChrX	stalkie_big_nohaplotig	CDS	66600752	66601432	.	-	0	Parent=comp157248_c0_seq1.mrna1
ChrX	gffcl	locus	66600250	66600642	.	+	.	ID=RLOC_00003820;geneIDs=comp143543_c0_seq1.path1;transcripts=comp143543_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66600250	66600642	.	+	.	ID=comp143543_c0_seq1.mrna1;geneID=comp143543_c0_seq1.path1;Name=comp143543_c0_seq1;Dir=indeterminatecoverage=100.0;identity=89.8;matches=309;mismatches=12;indels=23;unknowns=0;Target=comp143543_c0_seq1 154 2 .;locus=RLOC_00003820
ChrX	stalkie_big_nohaplotig	exon	66600250	66600563	89	+	.	Parent=comp143543_c0_seq1.mrna1;Target=comp143543_c0_seq1 305 1 .
ChrX	stalkie_big_nohaplotig	exon	66600620	66600642	95	+	.	Parent=comp143543_c0_seq1.mrna1;Target=comp143543_c0_seq1 328 306 .
ChrX	stalkie_big_nohaplotig	CDS	66600251	66600403	.	+	0	Parent=comp143543_c0_seq1.mrna1
ChrX	gffcl	locus	66605397	66610511	.	+	.	ID=RLOC_00003821;geneIDs=FBgn0033498.1.path1;transcripts=FBgn0033498.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66605397	66610511	.	+	.	ID=FBgn0033498.1.mrna1;geneID=FBgn0033498.1.path1;Name=FBgn0033498.1;Dir=sensecoverage=100.0;identity=100.0;matches=909;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003821
ChrX	stalkie_big_nohaplotig	exon	66605397	66605461	100	+	.	Parent=FBgn0033498.1.mrna1;Target=FBgn0033498.1 1 65 +
ChrX	stalkie_big_nohaplotig	exon	66609391	66609534	100	+	.	Parent=FBgn0033498.1.mrna1;Target=FBgn0033498.1 66 209 +
ChrX	stalkie_big_nohaplotig	exon	66609586	66609730	100	+	.	Parent=FBgn0033498.1.mrna1;Target=FBgn0033498.1 210 354 +
ChrX	stalkie_big_nohaplotig	exon	66609794	66609919	100	+	.	Parent=FBgn0033498.1.mrna1;Target=FBgn0033498.1 355 480 +
ChrX	stalkie_big_nohaplotig	exon	66609975	66610124	100	+	.	Parent=FBgn0033498.1.mrna1;Target=FBgn0033498.1 481 630 +
ChrX	stalkie_big_nohaplotig	exon	66610178	66610356	100	+	.	Parent=FBgn0033498.1.mrna1;Target=FBgn0033498.1 631 809 +
ChrX	stalkie_big_nohaplotig	exon	66610412	66610511	100	+	.	Parent=FBgn0033498.1.mrna1;Target=FBgn0033498.1 810 909 +
ChrX	stalkie_big_nohaplotig	CDS	66605397	66605461	.	+	0	Parent=FBgn0033498.1.mrna1;Target=FBgn0033498.1 1 65 +
ChrX	stalkie_big_nohaplotig	CDS	66609391	66609534	.	+	1	Parent=FBgn0033498.1.mrna1;Target=FBgn0033498.1 66 209 +
ChrX	stalkie_big_nohaplotig	CDS	66609586	66609730	.	+	1	Parent=FBgn0033498.1.mrna1;Target=FBgn0033498.1 210 354 +
ChrX	stalkie_big_nohaplotig	CDS	66609794	66609919	.	+	0	Parent=FBgn0033498.1.mrna1;Target=FBgn0033498.1 355 480 +
ChrX	stalkie_big_nohaplotig	CDS	66609975	66610124	.	+	0	Parent=FBgn0033498.1.mrna1;Target=FBgn0033498.1 481 630 +
ChrX	stalkie_big_nohaplotig	CDS	66610178	66610356	.	+	0	Parent=FBgn0033498.1.mrna1;Target=FBgn0033498.1 631 809 +
ChrX	stalkie_big_nohaplotig	CDS	66610412	66610511	.	+	1	Parent=FBgn0033498.1.mrna1;Target=FBgn0033498.1 810 909 +
ChrX	gffcl	locus	66622923	66623417	.	-	.	ID=RLOC_00003822;geneIDs=FBgn0000253.8.path1;transcripts=FBgn0000253.8.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66622923	66623417	.	-	.	ID=FBgn0000253.8.mrna1;geneID=FBgn0000253.8.path1;Name=FBgn0000253.8;Dir=indeterminatecoverage=100.0;identity=100.0;matches=495;mismatches=0;indels=0;unknowns=0;Target=FBgn0000253.8 495 1 .;locus=RLOC_00003822
ChrX	stalkie_big_nohaplotig	exon	66622923	66623417	100	-	.	Parent=FBgn0000253.8.mrna1
ChrX	stalkie_big_nohaplotig	CDS	66622923	66623417	.	-	0	Parent=FBgn0000253.8.mrna1
ChrX	gffcl	locus	66709257	66710034	.	-	.	ID=RLOC_00003823;geneIDs=comp148858_c0_seq1.path1;transcripts=comp148858_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66709257	66710034	.	-	.	ID=comp148858_c0_seq1.mrna1;geneID=comp148858_c0_seq1.path1;Name=comp148858_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=771;mismatches=7;indels=0;unknowns=0;Target=comp148858_c0_seq1 778 1 .;CDS_Target=comp148858_c0_seq1 299 234 .;locus=RLOC_00003823
ChrX	stalkie_big_nohaplotig	exon	66709257	66710034	99	-	.	Parent=comp148858_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	66709736	66709801	.	-	0	Parent=comp148858_c0_seq1.mrna1
ChrX	gffcl	locus	66711232	66712403	.	-	.	ID=RLOC_00003824;geneIDs=comp162252_c0_seq1.path1;transcripts=comp162252_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66711232	66712403	.	-	.	ID=comp162252_c0_seq1.mrna1;geneID=comp162252_c0_seq1.path1;Name=comp162252_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.1;matches=1166;mismatches=6;indels=5;unknowns=0;Target=comp162252_c0_seq1 1179 3 .;CDS_Target=comp162252_c0_seq1 974 723 .;locus=RLOC_00003824
ChrX	stalkie_big_nohaplotig	exon	66711232	66712403	99	-	.	Parent=comp162252_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	66711437	66711688	.	-	0	Parent=comp162252_c0_seq1.mrna1
ChrX	gffcl	locus	66712705	66713969	.	+	.	ID=RLOC_00003825;geneIDs=comp157519_c0_seq1.path1;transcripts=comp157519_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66712705	66713969	.	+	.	ID=comp157519_c0_seq1.mrna1;geneID=comp157519_c0_seq1.path1;Name=comp157519_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=1239;mismatches=25;indels=1;unknowns=0;Target=comp157519_c0_seq1 1264 1 .;CDS_Target=comp157519_c0_seq1 1256 1089 .;locus=RLOC_00003825
ChrX	stalkie_big_nohaplotig	exon	66712705	66713969	97	+	.	Parent=comp157519_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	66713793	66713961	.	+	0	Parent=comp157519_c0_seq1.mrna1
ChrX	gffcl	locus	66714683	66719524	.	-	.	ID=RLOC_00003826;geneIDs=FBgn0028888.path1;transcripts=FBgn0028888.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66714683	66719524	.	-	.	ID=FBgn0028888.mrna1;geneID=FBgn0028888.path1;Name=FBgn0028888;Dir=sensecoverage=97.7;identity=100.0;matches=692;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003826
ChrX	stalkie_big_nohaplotig	exon	66714683	66714853	100	-	.	Parent=FBgn0028888.mrna1;Target=FBgn0028888 538 708 +
ChrX	stalkie_big_nohaplotig	exon	66719004	66719524	100	-	.	Parent=FBgn0028888.mrna1;Target=FBgn0028888 17 537 +
ChrX	stalkie_big_nohaplotig	CDS	66714683	66714853	.	-	0	Parent=FBgn0028888.mrna1;Target=FBgn0028888 538 708 +
ChrX	stalkie_big_nohaplotig	CDS	66719004	66719522	.	-	0	Parent=FBgn0028888.mrna1;Target=FBgn0028888 19 537 +
ChrX	gffcl	locus	66721372	66846536	.	-	.	ID=RLOC_00003827;geneIDs=comp153902_c0_seq1.path1;transcripts=comp153902_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66721372	66846536	.	-	.	ID=comp153902_c0_seq1.mrna1;geneID=comp153902_c0_seq1.path1;Name=comp153902_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=1856;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003827
ChrX	stalkie_big_nohaplotig	exon	66721372	66722298	100	-	.	Parent=comp153902_c0_seq1.mrna1;Target=comp153902_c0_seq1 1 927 -
ChrX	stalkie_big_nohaplotig	exon	66723208	66723318	100	-	.	Parent=comp153902_c0_seq1.mrna1;Target=comp153902_c0_seq1 928 1038 -
ChrX	stalkie_big_nohaplotig	exon	66732090	66732234	100	-	.	Parent=comp153902_c0_seq1.mrna1;Target=comp153902_c0_seq1 1039 1183 -
ChrX	stalkie_big_nohaplotig	exon	66800682	66801034	99	-	.	Parent=comp153902_c0_seq1.mrna1;Target=comp153902_c0_seq1 1184 1536 -
ChrX	stalkie_big_nohaplotig	exon	66845075	66845112	100	-	.	Parent=comp153902_c0_seq1.mrna1;Target=comp153902_c0_seq1 1537 1574 -
ChrX	stalkie_big_nohaplotig	exon	66846254	66846536	100	-	.	Parent=comp153902_c0_seq1.mrna1;Target=comp153902_c0_seq1 1575 1857 -
ChrX	stalkie_big_nohaplotig	CDS	66721374	66722298	.	-	1	Parent=comp153902_c0_seq1.mrna1;Target=comp153902_c0_seq1 3 927 .
ChrX	stalkie_big_nohaplotig	CDS	66723208	66723318	.	-	1	Parent=comp153902_c0_seq1.mrna1;Target=comp153902_c0_seq1 928 1038 .
ChrX	stalkie_big_nohaplotig	CDS	66732090	66732234	.	-	2	Parent=comp153902_c0_seq1.mrna1;Target=comp153902_c0_seq1 1039 1183 .
ChrX	stalkie_big_nohaplotig	CDS	66800682	66801033	.	-	0	Parent=comp153902_c0_seq1.mrna1;Target=comp153902_c0_seq1 1184 1535 .
ChrX	gffcl	locus	66836789	66838790	.	-	.	ID=RLOC_00003829;geneIDs=comp160266_c1_seq1.path2;transcripts=comp160266_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	66836789	66838790	.	-	.	ID=comp160266_c1_seq1.mrna2;geneID=comp160266_c1_seq1.path2;Name=comp160266_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1994;mismatches=8;indels=0;unknowns=0;Target=comp160266_c1_seq1 2002 1 .;CDS_Target=comp160266_c1_seq1 2002 2 .;locus=RLOC_00003829
ChrX	stalkie_big_nohaplotig	exon	66836789	66838790	99	-	.	Parent=comp160266_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	66836789	66838789	.	-	0	Parent=comp160266_c1_seq1.mrna2
ChrX	gffcl	locus	66875647	66876743	.	+	.	ID=RLOC_00003830;geneIDs=comp156406_c0_seq1.path1;transcripts=comp156406_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66875647	66876743	.	+	.	ID=comp156406_c0_seq1.mrna1;geneID=comp156406_c0_seq1.path1;Name=comp156406_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=863;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003830
ChrX	stalkie_big_nohaplotig	exon	66875647	66875996	100	+	.	Parent=comp156406_c0_seq1.mrna1;Target=comp156406_c0_seq1 516 865 -
ChrX	stalkie_big_nohaplotig	exon	66876051	66876131	100	+	.	Parent=comp156406_c0_seq1.mrna1;Target=comp156406_c0_seq1 435 515 -
ChrX	stalkie_big_nohaplotig	exon	66876187	66876252	100	+	.	Parent=comp156406_c0_seq1.mrna1;Target=comp156406_c0_seq1 369 434 -
ChrX	stalkie_big_nohaplotig	exon	66876376	66876743	99	+	.	Parent=comp156406_c0_seq1.mrna1;Target=comp156406_c0_seq1 1 368 -
ChrX	stalkie_big_nohaplotig	CDS	66875703	66875996	.	+	0	Parent=comp156406_c0_seq1.mrna1;Target=comp156406_c0_seq1 516 809 .
ChrX	stalkie_big_nohaplotig	CDS	66876051	66876131	.	+	0	Parent=comp156406_c0_seq1.mrna1;Target=comp156406_c0_seq1 435 515 .
ChrX	stalkie_big_nohaplotig	CDS	66876187	66876252	.	+	0	Parent=comp156406_c0_seq1.mrna1;Target=comp156406_c0_seq1 369 434 .
ChrX	stalkie_big_nohaplotig	CDS	66876376	66876516	.	+	0	Parent=comp156406_c0_seq1.mrna1;Target=comp156406_c0_seq1 228 368 .
ChrX	gffcl	locus	66957179	66959004	.	+	.	ID=RLOC_00003831;geneIDs=ORF475.path1;transcripts=ORF475.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	66957179	66959004	.	+	.	ID=ORF475.mrna1;geneID=ORF475.path1;Name=ORF475;Dir=sensecoverage=100.0;identity=99.4;matches=1750;mismatches=10;indels=1;unknowns=0;locus=RLOC_00003831
ChrX	stalkie_big_nohaplotig	exon	66957179	66957216	97	+	.	Parent=ORF475.mrna1;Target=ORF475 1 39 +
ChrX	stalkie_big_nohaplotig	exon	66957283	66959004	99	+	.	Parent=ORF475.mrna1;Target=ORF475 40 1761 +
ChrX	stalkie_big_nohaplotig	CDS	66957181	66957216	.	+	0	Parent=ORF475.mrna1;Target=ORF475 3 39 +
ChrX	stalkie_big_nohaplotig	CDS	66957283	66957284	.	+	0	Parent=ORF475.mrna1;Target=ORF475 40 41 +
ChrX	gffcl	locus	67024164	67025884	.	-	.	ID=RLOC_00003834;geneIDs=comp154937_c0_seq1.path1;transcripts=comp154937_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67024164	67025884	.	-	.	ID=comp154937_c0_seq1.mrna1;geneID=comp154937_c0_seq1.path1;Name=comp154937_c0_seq1;Dir=antisensecoverage=98.1;identity=99.8;matches=1478;mismatches=3;indels=0;unknowns=0;Target=comp154937_c0_seq1 580 1254 .;locus=RLOC_00003834
ChrX	stalkie_big_nohaplotig	exon	67024164	67024731	99	-	.	Parent=comp154937_c0_seq1.mrna1;Target=comp154937_c0_seq1 12 579 -
ChrX	stalkie_big_nohaplotig	exon	67024972	67025884	99	-	.	Parent=comp154937_c0_seq1.mrna1;Target=comp154937_c0_seq1 580 1492 -
ChrX	stalkie_big_nohaplotig	CDS	67024972	67025646	.	-	0	Parent=comp154937_c0_seq1.mrna1
ChrX	gffcl	locus	67030980	67123950	.	-	.	ID=RLOC_00003835;geneIDs=ORF1691.path2,comp162687_c0_seq1.path2;transcripts=comp162687_c0_seq1.mrna2,ORF1691.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	67030980	67123950	.	-	.	ID=comp162687_c0_seq1.mrna2;geneID=comp162687_c0_seq1.path2;Name=comp162687_c0_seq1;Dir=sensecoverage=97.1;identity=99.1;matches=1485;mismatches=12;indels=1;unknowns=0;locus=RLOC_00003835
ChrX	stalkie_big_nohaplotig	exon	67030980	67031161	99	-	.	Parent=comp162687_c0_seq1.mrna2;Target=comp162687_c0_seq1 1361 1542 +
ChrX	stalkie_big_nohaplotig	exon	67031235	67031451	99	-	.	Parent=comp162687_c0_seq1.mrna2;Target=comp162687_c0_seq1 1144 1360 +
ChrX	stalkie_big_nohaplotig	exon	67122795	67123496	100	-	.	Parent=comp162687_c0_seq1.mrna2;Target=comp162687_c0_seq1 442 1143 +
ChrX	stalkie_big_nohaplotig	exon	67123554	67123950	97	-	.	Parent=comp162687_c0_seq1.mrna2;Target=comp162687_c0_seq1 46 441 +
ChrX	stalkie_big_nohaplotig	CDS	67030982	67031161	.	-	0	Parent=comp162687_c0_seq1.mrna2;Target=comp162687_c0_seq1 1361 1540 +
ChrX	stalkie_big_nohaplotig	CDS	67031235	67031451	.	-	1	Parent=comp162687_c0_seq1.mrna2;Target=comp162687_c0_seq1 1144 1360 +
ChrX	stalkie_big_nohaplotig	CDS	67122795	67123213	.	-	0	Parent=comp162687_c0_seq1.mrna2;Target=comp162687_c0_seq1 725 1143 +
ChrX	stalkie_big_nohaplotig	mRNA	67030982	67123495	.	-	.	ID=ORF1691.mrna2;geneID=ORF1691.path2;Name=ORF1691;Dir=sensecoverage=100.0;identity=98.8;matches=1014;mismatches=12;indels=0;unknowns=0;locus=RLOC_00003835
ChrX	stalkie_big_nohaplotig	exon	67030982	67031161	99	-	.	Parent=ORF1691.mrna2;Target=ORF1691 847 1026 +
ChrX	stalkie_big_nohaplotig	exon	67031235	67031451	99	-	.	Parent=ORF1691.mrna2;Target=ORF1691 630 846 +
ChrX	stalkie_big_nohaplotig	exon	67122795	67123222	99	-	.	Parent=ORF1691.mrna2;Target=ORF1691 202 629 +
ChrX	stalkie_big_nohaplotig	exon	67123295	67123495	96	-	.	Parent=ORF1691.mrna2;Target=ORF1691 1 201 +
ChrX	stalkie_big_nohaplotig	CDS	67030982	67031161	.	-	0	Parent=ORF1691.mrna2;Target=ORF1691 847 1026 +
ChrX	stalkie_big_nohaplotig	CDS	67031235	67031451	.	-	1	Parent=ORF1691.mrna2;Target=ORF1691 630 846 +
ChrX	stalkie_big_nohaplotig	CDS	67122795	67123222	.	-	0	Parent=ORF1691.mrna2;Target=ORF1691 202 629 +
ChrX	stalkie_big_nohaplotig	CDS	67123295	67123495	.	-	0	Parent=ORF1691.mrna2;Target=ORF1691 1 201 +
ChrX	gffcl	locus	67038052	67039626	.	+	.	ID=RLOC_00003836;geneIDs=ORF705.path1;transcripts=ORF705.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67038052	67039626	.	+	.	ID=ORF705.mrna1;geneID=ORF705.path1;Name=ORF705;Dir=sensecoverage=100.0;identity=98.9;matches=1492;mismatches=17;indels=0;unknowns=0;locus=RLOC_00003836
ChrX	stalkie_big_nohaplotig	exon	67038052	67038319	100	+	.	Parent=ORF705.mrna1;Target=ORF705 1 268 +
ChrX	stalkie_big_nohaplotig	exon	67038386	67039626	98	+	.	Parent=ORF705.mrna1;Target=ORF705 269 1509 +
ChrX	stalkie_big_nohaplotig	CDS	67038052	67038319	.	+	0	Parent=ORF705.mrna1;Target=ORF705 1 268 +
ChrX	stalkie_big_nohaplotig	CDS	67038386	67039626	.	+	2	Parent=ORF705.mrna1;Target=ORF705 269 1509 +
ChrX	gffcl	locus	67094514	67096088	.	-	.	ID=RLOC_00003837;geneIDs=ORF705.path2;transcripts=ORF705.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	67094514	67096088	.	-	.	ID=ORF705.mrna2;geneID=ORF705.path2;Name=ORF705;Dir=sensecoverage=100.0;identity=98.9;matches=1492;mismatches=17;indels=0;unknowns=0;locus=RLOC_00003837
ChrX	stalkie_big_nohaplotig	exon	67094514	67095754	98	-	.	Parent=ORF705.mrna2;Target=ORF705 269 1509 +
ChrX	stalkie_big_nohaplotig	exon	67095821	67096088	100	-	.	Parent=ORF705.mrna2;Target=ORF705 1 268 +
ChrX	stalkie_big_nohaplotig	CDS	67094514	67095754	.	-	2	Parent=ORF705.mrna2;Target=ORF705 269 1509 +
ChrX	stalkie_big_nohaplotig	CDS	67095821	67096088	.	-	0	Parent=ORF705.mrna2;Target=ORF705 1 268 +
ChrX	gffcl	locus	67105124	67106848	.	+	.	ID=RLOC_00003838;geneIDs=ORF620.path1;transcripts=ORF620.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67105124	67106848	.	+	.	ID=ORF620.mrna1;geneID=ORF620.path1;Name=ORF620;Dir=sensecoverage=100.0;identity=99.9;matches=1598;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003838
ChrX	stalkie_big_nohaplotig	exon	67105124	67105153	100	+	.	Parent=ORF620.mrna1;Target=ORF620 1 30 +
ChrX	stalkie_big_nohaplotig	exon	67105217	67105502	100	+	.	Parent=ORF620.mrna1;Target=ORF620 31 316 +
ChrX	stalkie_big_nohaplotig	exon	67105566	67106848	99	+	.	Parent=ORF620.mrna1;Target=ORF620 317 1599 +
ChrX	stalkie_big_nohaplotig	CDS	67105124	67105153	.	+	0	Parent=ORF620.mrna1;Target=ORF620 1 30 +
ChrX	stalkie_big_nohaplotig	CDS	67105217	67105502	.	+	0	Parent=ORF620.mrna1;Target=ORF620 31 316 +
ChrX	stalkie_big_nohaplotig	CDS	67105566	67106848	.	+	2	Parent=ORF620.mrna1;Target=ORF620 317 1599 +
ChrX	gffcl	locus	67125066	67128121	.	+	.	ID=RLOC_00003839;geneIDs=ORF1691.path1,comp162687_c0_seq1.path1;transcripts=comp162687_c0_seq1.mrna1,ORF1691.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67125066	67128121	.	+	.	ID=comp162687_c0_seq1.mrna1;geneID=comp162687_c0_seq1.path1;Name=comp162687_c0_seq1;Dir=sensecoverage=95.9;identity=99.5;matches=1471;mismatches=8;indels=0;unknowns=0;locus=RLOC_00003839
ChrX	stalkie_big_nohaplotig	exon	67125066	67125443	98	+	.	Parent=comp162687_c0_seq1.mrna1;Target=comp162687_c0_seq1 64 441 +
ChrX	stalkie_big_nohaplotig	exon	67125501	67126202	100	+	.	Parent=comp162687_c0_seq1.mrna1;Target=comp162687_c0_seq1 442 1143 +
ChrX	stalkie_big_nohaplotig	exon	67127650	67127866	99	+	.	Parent=comp162687_c0_seq1.mrna1;Target=comp162687_c0_seq1 1144 1360 +
ChrX	stalkie_big_nohaplotig	exon	67127940	67128121	99	+	.	Parent=comp162687_c0_seq1.mrna1;Target=comp162687_c0_seq1 1361 1542 +
ChrX	stalkie_big_nohaplotig	CDS	67125784	67126202	.	+	0	Parent=comp162687_c0_seq1.mrna1;Target=comp162687_c0_seq1 725 1143 +
ChrX	stalkie_big_nohaplotig	CDS	67127650	67127866	.	+	1	Parent=comp162687_c0_seq1.mrna1;Target=comp162687_c0_seq1 1144 1360 +
ChrX	stalkie_big_nohaplotig	CDS	67127940	67128119	.	+	0	Parent=comp162687_c0_seq1.mrna1;Target=comp162687_c0_seq1 1361 1540 +
ChrX	stalkie_big_nohaplotig	mRNA	67125502	67128119	.	+	.	ID=ORF1691.mrna1;geneID=ORF1691.path1;Name=ORF1691;Dir=sensecoverage=100.0;identity=98.8;matches=1014;mismatches=12;indels=0;unknowns=0;locus=RLOC_00003839
ChrX	stalkie_big_nohaplotig	exon	67125502	67125702	96	+	.	Parent=ORF1691.mrna1;Target=ORF1691 1 201 +
ChrX	stalkie_big_nohaplotig	exon	67125775	67126202	99	+	.	Parent=ORF1691.mrna1;Target=ORF1691 202 629 +
ChrX	stalkie_big_nohaplotig	exon	67127650	67127866	99	+	.	Parent=ORF1691.mrna1;Target=ORF1691 630 846 +
ChrX	stalkie_big_nohaplotig	exon	67127940	67128119	99	+	.	Parent=ORF1691.mrna1;Target=ORF1691 847 1026 +
ChrX	stalkie_big_nohaplotig	CDS	67125502	67125702	.	+	0	Parent=ORF1691.mrna1;Target=ORF1691 1 201 +
ChrX	stalkie_big_nohaplotig	CDS	67125775	67126202	.	+	0	Parent=ORF1691.mrna1;Target=ORF1691 202 629 +
ChrX	stalkie_big_nohaplotig	CDS	67127650	67127866	.	+	1	Parent=ORF1691.mrna1;Target=ORF1691 630 846 +
ChrX	stalkie_big_nohaplotig	CDS	67127940	67128119	.	+	0	Parent=ORF1691.mrna1;Target=ORF1691 847 1026 +
ChrX	gffcl	locus	67157359	67158086	.	+	.	ID=RLOC_00003840;geneIDs=comp163340_c1_seq1.path1;transcripts=comp163340_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67157359	67158086	.	+	.	ID=comp163340_c1_seq1.mrna1;geneID=comp163340_c1_seq1.path1;Name=comp163340_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=727;mismatches=1;indels=0;unknowns=0;Target=comp163340_c1_seq1 728 1 .;CDS_Target=comp163340_c1_seq1 407 204 .;locus=RLOC_00003840
ChrX	stalkie_big_nohaplotig	exon	67157359	67158086	99	+	.	Parent=comp163340_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	67157562	67157765	.	+	0	Parent=comp163340_c1_seq1.mrna1
ChrX	gffcl	locus	67183811	67186302	.	-	.	ID=RLOC_00003842;geneIDs=comp154303_c0_seq1.path1;transcripts=comp154303_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67183811	67186302	.	-	.	ID=comp154303_c0_seq1.mrna1;geneID=comp154303_c0_seq1.path1;Name=comp154303_c0_seq1;Dir=indeterminatecoverage=97.4;identity=92.2;matches=1511;mismatches=51;indels=77;unknowns=0;Target=comp154303_c0_seq1 652 497 .;locus=RLOC_00003842
ChrX	stalkie_big_nohaplotig	exon	67183811	67184937	89	-	.	Parent=comp154303_c0_seq1.mrna1;Target=comp154303_c0_seq1 1638 437 .
ChrX	stalkie_big_nohaplotig	exon	67185867	67186302	99	-	.	Parent=comp154303_c0_seq1.mrna1;Target=comp154303_c0_seq1 436 1 .
ChrX	stalkie_big_nohaplotig	CDS	67184722	67184877	.	-	0	Parent=comp154303_c0_seq1.mrna1
ChrX	gffcl	locus	67215251	67215996	.	+	.	ID=RLOC_00003843;geneIDs=comp156710_c0_seq1.path1;transcripts=comp156710_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67215251	67215996	.	+	.	ID=comp156710_c0_seq1.mrna1;geneID=comp156710_c0_seq1.path1;Name=comp156710_c0_seq1;Dir=indeterminatecoverage=98.8;identity=97.1;matches=725;mismatches=21;indels=1;unknowns=0;Target=comp156710_c0_seq1 756 10 .;CDS_Target=comp156710_c0_seq1 581 429 .;locus=RLOC_00003843
ChrX	stalkie_big_nohaplotig	exon	67215251	67215996	97	+	.	Parent=comp156710_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	67215669	67215821	.	+	0	Parent=comp156710_c0_seq1.mrna1
ChrX	gffcl	locus	67231906	67233301	.	+	.	ID=RLOC_00003844;geneIDs=comp151154_c0_seq1.path2;transcripts=comp151154_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	67231906	67233301	.	+	.	ID=comp151154_c0_seq1.mrna2;geneID=comp151154_c0_seq1.path2;Name=comp151154_c0_seq1;Dir=sensecoverage=99.4;identity=99.6;matches=700;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003844
ChrX	stalkie_big_nohaplotig	exon	67231906	67232189	98	+	.	Parent=comp151154_c0_seq1.mrna2;Target=comp151154_c0_seq1 2 285 +
ChrX	stalkie_big_nohaplotig	exon	67232724	67232895	100	+	.	Parent=comp151154_c0_seq1.mrna2;Target=comp151154_c0_seq1 286 457 +
ChrX	stalkie_big_nohaplotig	exon	67233055	67233301	100	+	.	Parent=comp151154_c0_seq1.mrna2;Target=comp151154_c0_seq1 458 704 +
ChrX	stalkie_big_nohaplotig	CDS	67232072	67232189	.	+	0	Parent=comp151154_c0_seq1.mrna2;Target=comp151154_c0_seq1 168 285 +
ChrX	stalkie_big_nohaplotig	CDS	67232724	67232895	.	+	2	Parent=comp151154_c0_seq1.mrna2;Target=comp151154_c0_seq1 286 457 +
ChrX	stalkie_big_nohaplotig	CDS	67233055	67233223	.	+	1	Parent=comp151154_c0_seq1.mrna2;Target=comp151154_c0_seq1 458 626 +
ChrX	gffcl	locus	67234323	67235718	.	-	.	ID=RLOC_00003845;geneIDs=comp151154_c0_seq1.path1;transcripts=comp151154_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67234323	67235718	.	-	.	ID=comp151154_c0_seq1.mrna1;geneID=comp151154_c0_seq1.path1;Name=comp151154_c0_seq1;Dir=sensecoverage=99.4;identity=99.7;matches=701;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003845
ChrX	stalkie_big_nohaplotig	exon	67234323	67234569	100	-	.	Parent=comp151154_c0_seq1.mrna1;Target=comp151154_c0_seq1 458 704 +
ChrX	stalkie_big_nohaplotig	exon	67234729	67234900	100	-	.	Parent=comp151154_c0_seq1.mrna1;Target=comp151154_c0_seq1 286 457 +
ChrX	stalkie_big_nohaplotig	exon	67235435	67235718	99	-	.	Parent=comp151154_c0_seq1.mrna1;Target=comp151154_c0_seq1 2 285 +
ChrX	stalkie_big_nohaplotig	CDS	67234401	67234569	.	-	1	Parent=comp151154_c0_seq1.mrna1;Target=comp151154_c0_seq1 458 626 +
ChrX	stalkie_big_nohaplotig	CDS	67234729	67234900	.	-	2	Parent=comp151154_c0_seq1.mrna1;Target=comp151154_c0_seq1 286 457 +
ChrX	stalkie_big_nohaplotig	CDS	67235435	67235552	.	-	0	Parent=comp151154_c0_seq1.mrna1;Target=comp151154_c0_seq1 168 285 +
ChrX	gffcl	locus	67246277	67251670	.	-	.	ID=RLOC_00003846;geneIDs=FBgn0038960.1.path1;transcripts=FBgn0038960.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67246277	67251670	.	-	.	ID=FBgn0038960.1.mrna1;geneID=FBgn0038960.1.path1;Name=FBgn0038960.1;Dir=sensecoverage=100.0;identity=99.9;matches=1996;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003846
ChrX	stalkie_big_nohaplotig	exon	67246277	67246541	100	-	.	Parent=FBgn0038960.1.mrna1;Target=FBgn0038960.1 1734 1998 +
ChrX	stalkie_big_nohaplotig	exon	67246664	67246848	99	-	.	Parent=FBgn0038960.1.mrna1;Target=FBgn0038960.1 1549 1733 +
ChrX	stalkie_big_nohaplotig	exon	67246920	67247032	100	-	.	Parent=FBgn0038960.1.mrna1;Target=FBgn0038960.1 1436 1548 +
ChrX	stalkie_big_nohaplotig	exon	67248911	67249049	100	-	.	Parent=FBgn0038960.1.mrna1;Target=FBgn0038960.1 1297 1435 +
ChrX	stalkie_big_nohaplotig	exon	67249130	67249293	100	-	.	Parent=FBgn0038960.1.mrna1;Target=FBgn0038960.1 1133 1296 +
ChrX	stalkie_big_nohaplotig	exon	67249349	67249695	100	-	.	Parent=FBgn0038960.1.mrna1;Target=FBgn0038960.1 786 1132 +
ChrX	stalkie_big_nohaplotig	exon	67249760	67249977	100	-	.	Parent=FBgn0038960.1.mrna1;Target=FBgn0038960.1 568 785 +
ChrX	stalkie_big_nohaplotig	exon	67250077	67250195	100	-	.	Parent=FBgn0038960.1.mrna1;Target=FBgn0038960.1 449 567 +
ChrX	stalkie_big_nohaplotig	exon	67251072	67251214	99	-	.	Parent=FBgn0038960.1.mrna1;Target=FBgn0038960.1 306 448 +
ChrX	stalkie_big_nohaplotig	exon	67251366	67251670	100	-	.	Parent=FBgn0038960.1.mrna1;Target=FBgn0038960.1 1 305 +
ChrX	stalkie_big_nohaplotig	CDS	67246277	67246541	.	-	1	Parent=FBgn0038960.1.mrna1;Target=FBgn0038960.1 1734 1998 +
ChrX	stalkie_big_nohaplotig	CDS	67246664	67246848	.	-	0	Parent=FBgn0038960.1.mrna1;Target=FBgn0038960.1 1549 1733 +
ChrX	stalkie_big_nohaplotig	CDS	67246920	67247032	.	-	2	Parent=FBgn0038960.1.mrna1;Target=FBgn0038960.1 1436 1548 +
ChrX	stalkie_big_nohaplotig	CDS	67248911	67249049	.	-	0	Parent=FBgn0038960.1.mrna1;Target=FBgn0038960.1 1297 1435 +
ChrX	stalkie_big_nohaplotig	CDS	67249130	67249293	.	-	2	Parent=FBgn0038960.1.mrna1;Target=FBgn0038960.1 1133 1296 +
ChrX	stalkie_big_nohaplotig	CDS	67249349	67249695	.	-	1	Parent=FBgn0038960.1.mrna1;Target=FBgn0038960.1 786 1132 +
ChrX	stalkie_big_nohaplotig	CDS	67249760	67249977	.	-	0	Parent=FBgn0038960.1.mrna1;Target=FBgn0038960.1 568 785 +
ChrX	stalkie_big_nohaplotig	CDS	67250077	67250195	.	-	2	Parent=FBgn0038960.1.mrna1;Target=FBgn0038960.1 449 567 +
ChrX	stalkie_big_nohaplotig	CDS	67251072	67251214	.	-	1	Parent=FBgn0038960.1.mrna1;Target=FBgn0038960.1 306 448 +
ChrX	stalkie_big_nohaplotig	CDS	67251366	67251670	.	-	0	Parent=FBgn0038960.1.mrna1;Target=FBgn0038960.1 1 305 +
ChrX	gffcl	locus	67257447	67261552	.	-	.	ID=RLOC_00003847;geneIDs=comp158280_c0_seq1.path1;transcripts=comp158280_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67257447	67261552	.	-	.	ID=comp158280_c0_seq1.mrna1;geneID=comp158280_c0_seq1.path1;Name=comp158280_c0_seq1;Dir=antisensecoverage=97.2;identity=97.7;matches=822;mismatches=15;indels=4;unknowns=0;Target=comp158280_c0_seq1 325 390 .;locus=RLOC_00003847
ChrX	stalkie_big_nohaplotig	exon	67257447	67257879	98	-	.	Parent=comp158280_c0_seq1.mrna1;Target=comp158280_c0_seq1 1 435 -
ChrX	stalkie_big_nohaplotig	exon	67257938	67258040	97	-	.	Parent=comp158280_c0_seq1.mrna1;Target=comp158280_c0_seq1 436 538 -
ChrX	stalkie_big_nohaplotig	exon	67261250	67261552	97	-	.	Parent=comp158280_c0_seq1.mrna1;Target=comp158280_c0_seq1 539 839 -
ChrX	stalkie_big_nohaplotig	CDS	67257769	67257834	.	-	0	Parent=comp158280_c0_seq1.mrna1
ChrX	gffcl	locus	67260398	69210081	.	+	.	ID=RLOC_00003848;geneIDs=comp152017_c0_seq1.path1;transcripts=comp152017_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67260398	69210081	.	+	.	ID=comp152017_c0_seq1.mrna1;geneID=comp152017_c0_seq1.path1;Name=comp152017_c0_seq1;Dir=sensecoverage=90.9;identity=96.9;matches=1753;mismatches=19;indels=38;unknowns=0;Target=comp152017_c0_seq1 499 1176 +;locus=RLOC_00003848
ChrX	stalkie_big_nohaplotig	exon	67260398	67260872	94	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 18 492 +
ChrX	stalkie_big_nohaplotig	exon	67262976	67264129	98	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 493 1652 +
ChrX	stalkie_big_nohaplotig	exon	69103966	69103969	100	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 1653 1656 +
ChrX	stalkie_big_nohaplotig	exon	69116586	69116589	100	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 1657 1660 +
ChrX	stalkie_big_nohaplotig	exon	69122557	69122570	100	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 1661 1674 +
ChrX	stalkie_big_nohaplotig	exon	69122800	69122805	100	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 1675 1680 +
ChrX	stalkie_big_nohaplotig	exon	69127121	69127122	100	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 1681 1682 +
ChrX	stalkie_big_nohaplotig	exon	69128991	69129008	78	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 1683 1705 +
ChrX	stalkie_big_nohaplotig	exon	69133825	69133827	100	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 1706 1708 +
ChrX	stalkie_big_nohaplotig	exon	69139544	69139551	100	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 1709 1716 +
ChrX	stalkie_big_nohaplotig	exon	69139557	69139559	100	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 1724 1726 +
ChrX	stalkie_big_nohaplotig	exon	69146753	69146758	100	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 1727 1732 +
ChrX	stalkie_big_nohaplotig	exon	69152952	69152955	100	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 1733 1736 +
ChrX	stalkie_big_nohaplotig	exon	69156009	69156017	100	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 1737 1745 +
ChrX	stalkie_big_nohaplotig	exon	69156049	69156071	60	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 1779 1792 +
ChrX	stalkie_big_nohaplotig	exon	69172223	69172226	100	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 1793 1796 +
ChrX	stalkie_big_nohaplotig	exon	69179776	69179781	100	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 1797 1802 +
ChrX	stalkie_big_nohaplotig	exon	69187010	69187017	100	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 1803 1810 +
ChrX	stalkie_big_nohaplotig	exon	69193579	69193585	100	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 1811 1817 +
ChrX	stalkie_big_nohaplotig	exon	69194741	69194748	100	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 1818 1825 +
ChrX	stalkie_big_nohaplotig	exon	69198931	69198935	100	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 1826 1830 +
ChrX	stalkie_big_nohaplotig	exon	69208109	69208113	100	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 1831 1835 +
ChrX	stalkie_big_nohaplotig	exon	69210068	69210081	100	+	.	Parent=comp152017_c0_seq1.mrna1;Target=comp152017_c0_seq1 1836 1849 +
ChrX	stalkie_big_nohaplotig	CDS	67262982	67263659	.	+	0	Parent=comp152017_c0_seq1.mrna1
ChrX	gffcl	locus	67267972	67271799	.	-	.	ID=RLOC_00003849;geneIDs=comp159288_c0_seq1.path1;transcripts=comp159288_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67267972	67271799	.	-	.	ID=comp159288_c0_seq1.mrna1;geneID=comp159288_c0_seq1.path1;Name=comp159288_c0_seq1;Dir=sensecoverage=99.1;identity=99.6;matches=1868;mismatches=6;indels=1;unknowns=0;Target=comp159288_c0_seq1 215 823 +;locus=RLOC_00003849
ChrX	stalkie_big_nohaplotig	exon	67267972	67268159	98	-	.	Parent=comp159288_c0_seq1.mrna1;Target=comp159288_c0_seq1 1702 1890 +
ChrX	stalkie_big_nohaplotig	exon	67268734	67268790	98	-	.	Parent=comp159288_c0_seq1.mrna1;Target=comp159288_c0_seq1 1645 1701 +
ChrX	stalkie_big_nohaplotig	exon	67269033	67269203	98	-	.	Parent=comp159288_c0_seq1.mrna1;Target=comp159288_c0_seq1 1474 1644 +
ChrX	stalkie_big_nohaplotig	exon	67269294	67269613	100	-	.	Parent=comp159288_c0_seq1.mrna1;Target=comp159288_c0_seq1 1154 1473 +
ChrX	stalkie_big_nohaplotig	exon	67270603	67270639	100	-	.	Parent=comp159288_c0_seq1.mrna1;Target=comp159288_c0_seq1 1117 1153 +
ChrX	stalkie_big_nohaplotig	exon	67270699	67271799	100	-	.	Parent=comp159288_c0_seq1.mrna1;Target=comp159288_c0_seq1 16 1116 +
ChrX	stalkie_big_nohaplotig	CDS	67270992	67271600	.	-	0	Parent=comp159288_c0_seq1.mrna1
ChrX	gffcl	locus	67474167	67475045	.	+	.	ID=RLOC_00003850;geneIDs=comp157116_c0_seq1.path1;transcripts=comp157116_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67474167	67475045	.	+	.	ID=comp157116_c0_seq1.mrna1;geneID=comp157116_c0_seq1.path1;Name=comp157116_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=874;mismatches=5;indels=0;unknowns=0;Target=comp157116_c0_seq1 879 1 .;CDS_Target=comp157116_c0_seq1 591 436 .;locus=RLOC_00003850
ChrX	stalkie_big_nohaplotig	exon	67474167	67475045	99	+	.	Parent=comp157116_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	67474602	67474757	.	+	0	Parent=comp157116_c0_seq1.mrna1
ChrX	gffcl	locus	67476092	67477747	.	-	.	ID=RLOC_00003851;geneIDs=comp162251_c0_seq1.path1;transcripts=comp162251_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67476092	67477747	.	-	.	ID=comp162251_c0_seq1.mrna1;geneID=comp162251_c0_seq1.path1;Name=comp162251_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.3;matches=1651;mismatches=4;indels=8;unknowns=0;Target=comp162251_c0_seq1 1675 14 .;CDS_Target=comp162251_c0_seq1 84 49 .;locus=RLOC_00003851
ChrX	stalkie_big_nohaplotig	exon	67476092	67477747	99	-	.	Parent=comp162251_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	67477676	67477712	.	-	0	Parent=comp162251_c0_seq1.mrna1
ChrX	gffcl	locus	67477945	67481561	.	-	.	ID=RLOC_00003852;geneIDs=FBgn0021856.2.path1;transcripts=FBgn0021856.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67477945	67481561	.	-	.	ID=FBgn0021856.2.mrna1;geneID=FBgn0021856.2.path1;Name=FBgn0021856.2;Dir=sensecoverage=100.0;identity=99.6;matches=804;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003852
ChrX	stalkie_big_nohaplotig	exon	67477945	67478174	100	-	.	Parent=FBgn0021856.2.mrna1;Target=FBgn0021856.2 578 807 +
ChrX	stalkie_big_nohaplotig	exon	67478240	67478420	98	-	.	Parent=FBgn0021856.2.mrna1;Target=FBgn0021856.2 397 577 +
ChrX	stalkie_big_nohaplotig	exon	67481112	67481419	100	-	.	Parent=FBgn0021856.2.mrna1;Target=FBgn0021856.2 89 396 +
ChrX	stalkie_big_nohaplotig	exon	67481474	67481561	100	-	.	Parent=FBgn0021856.2.mrna1;Target=FBgn0021856.2 1 88 +
ChrX	stalkie_big_nohaplotig	CDS	67477945	67478174	.	-	2	Parent=FBgn0021856.2.mrna1;Target=FBgn0021856.2 578 807 +
ChrX	stalkie_big_nohaplotig	CDS	67478240	67478420	.	-	0	Parent=FBgn0021856.2.mrna1;Target=FBgn0021856.2 397 577 +
ChrX	stalkie_big_nohaplotig	CDS	67481112	67481419	.	-	2	Parent=FBgn0021856.2.mrna1;Target=FBgn0021856.2 89 396 +
ChrX	stalkie_big_nohaplotig	CDS	67481474	67481561	.	-	0	Parent=FBgn0021856.2.mrna1;Target=FBgn0021856.2 1 88 +
ChrX	gffcl	locus	67483603	67494799	.	+	.	ID=RLOC_00003853;geneIDs=FBgn0010422.2.path1;transcripts=FBgn0010422.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67483603	67494799	.	+	.	ID=FBgn0010422.2.mrna1;geneID=FBgn0010422.2.path1;Name=FBgn0010422.2;Dir=sensecoverage=100.0;identity=99.8;matches=988;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003853
ChrX	stalkie_big_nohaplotig	exon	67483603	67483701	100	+	.	Parent=FBgn0010422.2.mrna1;Target=FBgn0010422.2 1 99 +
ChrX	stalkie_big_nohaplotig	exon	67493909	67494799	99	+	.	Parent=FBgn0010422.2.mrna1;Target=FBgn0010422.2 100 990 +
ChrX	stalkie_big_nohaplotig	CDS	67483603	67483701	.	+	0	Parent=FBgn0010422.2.mrna1;Target=FBgn0010422.2 1 99 +
ChrX	stalkie_big_nohaplotig	CDS	67493909	67494799	.	+	0	Parent=FBgn0010422.2.mrna1;Target=FBgn0010422.2 100 990 +
ChrX	gffcl	locus	67495051	67495458	.	+	.	ID=RLOC_00003854;geneIDs=comp161494_c6_seq1.path2;transcripts=comp161494_c6_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	67495051	67495458	.	+	.	ID=comp161494_c6_seq1.mrna2;geneID=comp161494_c6_seq1.path2;Name=comp161494_c6_seq1;Dir=indeterminatecoverage=10.7;identity=100.0;matches=408;mismatches=0;indels=0;unknowns=0;Target=comp161494_c6_seq1 3798 3391 .;locus=RLOC_00003854
ChrX	stalkie_big_nohaplotig	exon	67495051	67495458	100	+	.	Parent=comp161494_c6_seq1.mrna2
ChrX	gffcl	locus	67497434	67498199	.	+	.	ID=RLOC_00003855;geneIDs=comp152580_c0_seq1.path1;transcripts=comp152580_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67497434	67498199	.	+	.	ID=comp152580_c0_seq1.mrna1;geneID=comp152580_c0_seq1.path1;Name=comp152580_c0_seq1;Dir=indeterminatecoverage=97.8;identity=98.8;matches=758;mismatches=8;indels=1;unknowns=0;Target=comp152580_c0_seq1 784 18 .;CDS_Target=comp152580_c0_seq1 639 613 .;locus=RLOC_00003855
ChrX	stalkie_big_nohaplotig	exon	67497434	67498199	98	+	.	Parent=comp152580_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	67498028	67498054	.	+	0	Parent=comp152580_c0_seq1.mrna1
ChrX	gffcl	locus	67572529	67573062	.	+	.	ID=RLOC_00003858;geneIDs=comp135878_c0_seq1.path1;transcripts=comp135878_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67572529	67573062	.	+	.	ID=comp135878_c0_seq1.mrna1;geneID=comp135878_c0_seq1.path1;Name=comp135878_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=533;mismatches=1;indels=0;unknowns=0;Target=comp135878_c0_seq1 534 1 .;CDS_Target=comp135878_c0_seq1 391 260 .;locus=RLOC_00003858
ChrX	stalkie_big_nohaplotig	exon	67572529	67573062	99	+	.	Parent=comp135878_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	67572788	67572919	.	+	0	Parent=comp135878_c0_seq1.mrna1
ChrX	gffcl	locus	67594649	67608532	.	-	.	ID=RLOC_00003859;geneIDs=FBgn0004837.1.path1;transcripts=FBgn0004837.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67594649	67608532	.	-	.	ID=FBgn0004837.1.mrna1;geneID=FBgn0004837.1.path1;Name=FBgn0004837.1;Dir=sensecoverage=100.0;identity=99.8;matches=1959;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003859
ChrX	stalkie_big_nohaplotig	exon	67594649	67594951	100	-	.	Parent=FBgn0004837.1.mrna1;Target=FBgn0004837.1 1660 1962 +
ChrX	stalkie_big_nohaplotig	exon	67595039	67595246	99	-	.	Parent=FBgn0004837.1.mrna1;Target=FBgn0004837.1 1452 1659 +
ChrX	stalkie_big_nohaplotig	exon	67595301	67595635	100	-	.	Parent=FBgn0004837.1.mrna1;Target=FBgn0004837.1 1117 1451 +
ChrX	stalkie_big_nohaplotig	exon	67595706	67596251	99	-	.	Parent=FBgn0004837.1.mrna1;Target=FBgn0004837.1 571 1116 +
ChrX	stalkie_big_nohaplotig	exon	67607963	67608532	100	-	.	Parent=FBgn0004837.1.mrna1;Target=FBgn0004837.1 1 570 +
ChrX	stalkie_big_nohaplotig	CDS	67594649	67594951	.	-	0	Parent=FBgn0004837.1.mrna1;Target=FBgn0004837.1 1660 1962 +
ChrX	stalkie_big_nohaplotig	CDS	67595039	67595246	.	-	1	Parent=FBgn0004837.1.mrna1;Target=FBgn0004837.1 1452 1659 +
ChrX	stalkie_big_nohaplotig	CDS	67595301	67595635	.	-	0	Parent=FBgn0004837.1.mrna1;Target=FBgn0004837.1 1117 1451 +
ChrX	stalkie_big_nohaplotig	CDS	67595706	67596251	.	-	0	Parent=FBgn0004837.1.mrna1;Target=FBgn0004837.1 571 1116 +
ChrX	stalkie_big_nohaplotig	CDS	67607963	67608532	.	-	0	Parent=FBgn0004837.1.mrna1;Target=FBgn0004837.1 1 570 +
ChrX	gffcl	locus	67641293	67643574	.	+	.	ID=RLOC_00003860;geneIDs=FBgn0031853.5.path1;transcripts=FBgn0031853.5.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67641293	67643574	.	+	.	ID=FBgn0031853.5.mrna1;geneID=FBgn0031853.5.path1;Name=FBgn0031853.5;Dir=sensecoverage=100.0;identity=99.9;matches=2143;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003860
ChrX	stalkie_big_nohaplotig	exon	67641293	67642538	99	+	.	Parent=FBgn0031853.5.mrna1;Target=FBgn0031853.5 1 1246 +
ChrX	stalkie_big_nohaplotig	exon	67642611	67643380	100	+	.	Parent=FBgn0031853.5.mrna1;Target=FBgn0031853.5 1247 2016 +
ChrX	stalkie_big_nohaplotig	exon	67643446	67643574	100	+	.	Parent=FBgn0031853.5.mrna1;Target=FBgn0031853.5 2017 2145 +
ChrX	stalkie_big_nohaplotig	CDS	67641293	67642538	.	+	0	Parent=FBgn0031853.5.mrna1;Target=FBgn0031853.5 1 1246 +
ChrX	stalkie_big_nohaplotig	CDS	67642611	67643380	.	+	2	Parent=FBgn0031853.5.mrna1;Target=FBgn0031853.5 1247 2016 +
ChrX	stalkie_big_nohaplotig	CDS	67643446	67643574	.	+	0	Parent=FBgn0031853.5.mrna1;Target=FBgn0031853.5 2017 2145 +
ChrX	gffcl	locus	67645029	67645573	.	-	.	ID=RLOC_00003861;geneIDs=comp147119_c0_seq1.path1;transcripts=comp147119_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67645029	67645573	.	-	.	ID=comp147119_c0_seq1.mrna1;geneID=comp147119_c0_seq1.path1;Name=comp147119_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.8;matches=544;mismatches=1;indels=0;unknowns=0;Target=comp147119_c0_seq1 545 1 .;CDS_Target=comp147119_c0_seq1 81 1 .;locus=RLOC_00003861
ChrX	stalkie_big_nohaplotig	exon	67645029	67645573	99	-	.	Parent=comp147119_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	67645493	67645573	.	-	0	Parent=comp147119_c0_seq1.mrna1
ChrX	gffcl	locus	67645889	67646375	.	+	.	ID=RLOC_00003862;geneIDs=comp155814_c0_seq1.path1;transcripts=comp155814_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67645889	67646375	.	+	.	ID=comp155814_c0_seq1.mrna1;geneID=comp155814_c0_seq1.path1;Name=comp155814_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.8;matches=477;mismatches=10;indels=11;unknowns=0;Target=comp155814_c0_seq1 498 1 .;CDS_Target=comp155814_c0_seq1 186 46 .;locus=RLOC_00003862
ChrX	stalkie_big_nohaplotig	exon	67645889	67646375	95	+	.	Parent=comp155814_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	67645934	67646074	.	+	0	Parent=comp155814_c0_seq1.mrna1
ChrX	gffcl	locus	67649382	67650361	.	+	.	ID=RLOC_00003863;geneIDs=comp154763_c0_seq1.path1;transcripts=comp154763_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67649382	67650361	.	+	.	ID=comp154763_c0_seq1.mrna1;geneID=comp154763_c0_seq1.path1;Name=comp154763_c0_seq1;Dir=indeterminatecoverage=98.9;identity=97.0;matches=965;mismatches=15;indels=15;unknowns=0;Target=comp154763_c0_seq1 995 1 .;CDS_Target=comp154763_c0_seq1 549 349 .;locus=RLOC_00003863
ChrX	stalkie_big_nohaplotig	exon	67649382	67650361	96	+	.	Parent=comp154763_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	67649730	67649929	.	+	0	Parent=comp154763_c0_seq1.mrna1
ChrX	gffcl	locus	67650803	67651094	.	-	.	ID=RLOC_00003864;geneIDs=comp141748_c0_seq1.path1;transcripts=comp141748_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67650803	67651094	.	-	.	ID=comp141748_c0_seq1.mrna1;geneID=comp141748_c0_seq1.path1;Name=comp141748_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=285;mismatches=7;indels=1;unknowns=0;Target=comp141748_c0_seq1 293 1 .;CDS_Target=comp141748_c0_seq1 293 249 .;locus=RLOC_00003864
ChrX	stalkie_big_nohaplotig	exon	67650803	67651094	97	-	.	Parent=comp141748_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	67650803	67650847	.	-	0	Parent=comp141748_c0_seq1.mrna1
ChrX	gffcl	locus	67663486	67665253	.	+	.	ID=RLOC_00003865;geneIDs=AGAP004990.1.path1;transcripts=AGAP004990.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67663486	67665253	.	+	.	ID=AGAP004990.1.mrna1;geneID=AGAP004990.1.path1;Name=AGAP004990.1;Dir=sensecoverage=100.0;identity=99.6;matches=553;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003865
ChrX	stalkie_big_nohaplotig	exon	67663486	67663669	98	+	.	Parent=AGAP004990.1.mrna1;Target=AGAP004990.1 1 184 +
ChrX	stalkie_big_nohaplotig	exon	67664807	67664967	100	+	.	Parent=AGAP004990.1.mrna1;Target=AGAP004990.1 185 345 +
ChrX	stalkie_big_nohaplotig	exon	67665044	67665253	100	+	.	Parent=AGAP004990.1.mrna1;Target=AGAP004990.1 346 555 +
ChrX	stalkie_big_nohaplotig	CDS	67663486	67663669	.	+	0	Parent=AGAP004990.1.mrna1;Target=AGAP004990.1 1 184 +
ChrX	stalkie_big_nohaplotig	CDS	67664807	67664967	.	+	2	Parent=AGAP004990.1.mrna1;Target=AGAP004990.1 185 345 +
ChrX	stalkie_big_nohaplotig	CDS	67665044	67665253	.	+	0	Parent=AGAP004990.1.mrna1;Target=AGAP004990.1 346 555 +
ChrX	gffcl	locus	67725265	67727426	.	+	.	ID=RLOC_00003866;geneIDs=comp146105_c0_seq1.path1;transcripts=comp146105_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67725265	67727426	.	+	.	ID=comp146105_c0_seq1.mrna1;geneID=comp146105_c0_seq1.path1;Name=comp146105_c0_seq1;Dir=antisensecoverage=97.4;identity=98.2;matches=754;mismatches=9;indels=5;unknowns=0;Target=comp146105_c0_seq1 83 319 .;locus=RLOC_00003866
ChrX	stalkie_big_nohaplotig	exon	67725265	67725682	99	+	.	Parent=comp146105_c0_seq1.mrna1;Target=comp146105_c0_seq1 348 765 -
ChrX	stalkie_big_nohaplotig	exon	67727078	67727426	96	+	.	Parent=comp146105_c0_seq1.mrna1;Target=comp146105_c0_seq1 2 347 -
ChrX	stalkie_big_nohaplotig	CDS	67727106	67727341	.	+	0	Parent=comp146105_c0_seq1.mrna1
ChrX	gffcl	locus	67769206	67770461	.	-	.	ID=RLOC_00003867;geneIDs=comp163207_c0_seq1.path1;transcripts=comp163207_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67769206	67770461	.	-	.	ID=comp163207_c0_seq1.mrna1;geneID=comp163207_c0_seq1.path1;Name=comp163207_c0_seq1;Dir=antisensecoverage=99.3;identity=95.3;matches=1165;mismatches=27;indels=31;unknowns=0;Target=comp163207_c0_seq1 297 827 .;locus=RLOC_00003867
ChrX	stalkie_big_nohaplotig	exon	67769206	67770149	96	-	.	Parent=comp163207_c0_seq1.mrna1;Target=comp163207_c0_seq1 1 946 -
ChrX	stalkie_big_nohaplotig	exon	67770209	67770461	90	-	.	Parent=comp163207_c0_seq1.mrna1;Target=comp163207_c0_seq1 947 1218 -
ChrX	stalkie_big_nohaplotig	CDS	67769507	67770037	.	-	0	Parent=comp163207_c0_seq1.mrna1
ChrX	gffcl	locus	67880498	67882737	.	+	.	ID=RLOC_00003868;geneIDs=FBgn0036538.1.path1;transcripts=FBgn0036538.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67880498	67882737	.	+	.	ID=FBgn0036538.1.mrna1;geneID=FBgn0036538.1.path1;Name=FBgn0036538.1;Dir=sensecoverage=100.0;identity=100.0;matches=267;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003868
ChrX	stalkie_big_nohaplotig	exon	67880498	67880518	100	+	.	Parent=FBgn0036538.1.mrna1;Target=FBgn0036538.1 1 21 +
ChrX	stalkie_big_nohaplotig	exon	67882430	67882588	100	+	.	Parent=FBgn0036538.1.mrna1;Target=FBgn0036538.1 22 180 +
ChrX	stalkie_big_nohaplotig	exon	67882651	67882737	100	+	.	Parent=FBgn0036538.1.mrna1;Target=FBgn0036538.1 181 267 +
ChrX	stalkie_big_nohaplotig	CDS	67880498	67880518	.	+	0	Parent=FBgn0036538.1.mrna1;Target=FBgn0036538.1 1 21 +
ChrX	stalkie_big_nohaplotig	CDS	67882430	67882588	.	+	0	Parent=FBgn0036538.1.mrna1;Target=FBgn0036538.1 22 180 +
ChrX	stalkie_big_nohaplotig	CDS	67882651	67882737	.	+	0	Parent=FBgn0036538.1.mrna1;Target=FBgn0036538.1 181 267 +
ChrX	gffcl	locus	67892740	67893701	.	-	.	ID=RLOC_00003869;geneIDs=FBgn0037889.1.path1;transcripts=FBgn0037889.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67892740	67893701	.	-	.	ID=FBgn0037889.1.mrna1;geneID=FBgn0037889.1.path1;Name=FBgn0037889.1;Dir=sensecoverage=100.0;identity=99.9;matches=836;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003869
ChrX	stalkie_big_nohaplotig	exon	67892740	67892986	100	-	.	Parent=FBgn0037889.1.mrna1;Target=FBgn0037889.1 591 837 +
ChrX	stalkie_big_nohaplotig	exon	67893050	67893447	100	-	.	Parent=FBgn0037889.1.mrna1;Target=FBgn0037889.1 193 590 +
ChrX	stalkie_big_nohaplotig	exon	67893510	67893701	99	-	.	Parent=FBgn0037889.1.mrna1;Target=FBgn0037889.1 1 192 +
ChrX	stalkie_big_nohaplotig	CDS	67892740	67892986	.	-	1	Parent=FBgn0037889.1.mrna1;Target=FBgn0037889.1 591 837 +
ChrX	stalkie_big_nohaplotig	CDS	67893050	67893447	.	-	0	Parent=FBgn0037889.1.mrna1;Target=FBgn0037889.1 193 590 +
ChrX	stalkie_big_nohaplotig	CDS	67893510	67893701	.	-	0	Parent=FBgn0037889.1.mrna1;Target=FBgn0037889.1 1 192 +
ChrX	gffcl	locus	67903052	67904443	.	+	.	ID=RLOC_00003870;geneIDs=FBgn0052238.2.path1;transcripts=FBgn0052238.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67903052	67904443	.	+	.	ID=FBgn0052238.2.mrna1;geneID=FBgn0052238.2.path1;Name=FBgn0052238.2;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1387;mismatches=5;indels=0;unknowns=0;Target=FBgn0052238.2 1392 1 .;locus=RLOC_00003870
ChrX	stalkie_big_nohaplotig	exon	67903052	67904443	99	+	.	Parent=FBgn0052238.2.mrna1
ChrX	stalkie_big_nohaplotig	CDS	67903052	67904443	.	+	0	Parent=FBgn0052238.2.mrna1
ChrX	gffcl	locus	67928324	68316949	.	-	.	ID=RLOC_00003873;geneIDs=comp156718_c0_seq1.path1;transcripts=comp156718_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67928324	68316949	.	-	.	ID=comp156718_c0_seq1.mrna1;geneID=comp156718_c0_seq1.path1;Name=comp156718_c0_seq1;Dir=indeterminatecoverage=94.7;identity=94.7;matches=647;mismatches=9;indels=27;unknowns=0;Target=comp156718_c0_seq1 848 765 .;locus=RLOC_00003873
ChrX	stalkie_big_nohaplotig	exon	67928324	67928826	99	-	.	Parent=comp156718_c0_seq1.mrna1;Target=comp156718_c0_seq1 849 347 .
ChrX	stalkie_big_nohaplotig	exon	67937885	67937886	100	-	.	Parent=comp156718_c0_seq1.mrna1;Target=comp156718_c0_seq1 346 345 .
ChrX	stalkie_big_nohaplotig	exon	67953539	67953547	100	-	.	Parent=comp156718_c0_seq1.mrna1;Target=comp156718_c0_seq1 333 325 .
ChrX	stalkie_big_nohaplotig	exon	67953556	67953563	100	-	.	Parent=comp156718_c0_seq1.mrna1;Target=comp156718_c0_seq1 271 264 .
ChrX	stalkie_big_nohaplotig	exon	68195988	68195995	100	-	.	Parent=comp156718_c0_seq1.mrna1;Target=comp156718_c0_seq1 263 256 .
ChrX	stalkie_big_nohaplotig	exon	68195999	68196001	100	-	.	Parent=comp156718_c0_seq1.mrna1;Target=comp156718_c0_seq1 216 214 .
ChrX	stalkie_big_nohaplotig	exon	68198509	68198512	100	-	.	Parent=comp156718_c0_seq1.mrna1;Target=comp156718_c0_seq1 213 210 .
ChrX	stalkie_big_nohaplotig	exon	68206660	68206666	100	-	.	Parent=comp156718_c0_seq1.mrna1;Target=comp156718_c0_seq1 209 203 .
ChrX	stalkie_big_nohaplotig	exon	68212493	68212496	100	-	.	Parent=comp156718_c0_seq1.mrna1;Target=comp156718_c0_seq1 202 199 .
ChrX	stalkie_big_nohaplotig	exon	68217472	68217481	100	-	.	Parent=comp156718_c0_seq1.mrna1;Target=comp156718_c0_seq1 198 189 .
ChrX	stalkie_big_nohaplotig	exon	68220476	68220484	100	-	.	Parent=comp156718_c0_seq1.mrna1;Target=comp156718_c0_seq1 188 180 .
ChrX	stalkie_big_nohaplotig	exon	68223177	68223183	100	-	.	Parent=comp156718_c0_seq1.mrna1;Target=comp156718_c0_seq1 179 173 .
ChrX	stalkie_big_nohaplotig	exon	68227540	68227549	80	-	.	Parent=comp156718_c0_seq1.mrna1;Target=comp156718_c0_seq1 172 163 .
ChrX	stalkie_big_nohaplotig	exon	68231918	68231934	50	-	.	Parent=comp156718_c0_seq1.mrna1;Target=comp156718_c0_seq1 162 133 .
ChrX	stalkie_big_nohaplotig	exon	68248140	68248149	100	-	.	Parent=comp156718_c0_seq1.mrna1;Target=comp156718_c0_seq1 132 123 .
ChrX	stalkie_big_nohaplotig	exon	68268008	68268027	52	-	.	Parent=comp156718_c0_seq1.mrna1;Target=comp156718_c0_seq1 122 89 .
ChrX	stalkie_big_nohaplotig	exon	68281825	68281829	100	-	.	Parent=comp156718_c0_seq1.mrna1;Target=comp156718_c0_seq1 88 84 .
ChrX	stalkie_big_nohaplotig	exon	68302656	68302664	100	-	.	Parent=comp156718_c0_seq1.mrna1;Target=comp156718_c0_seq1 83 75 .
ChrX	stalkie_big_nohaplotig	exon	68316941	68316949	100	-	.	Parent=comp156718_c0_seq1.mrna1;Target=comp156718_c0_seq1 72 64 .
ChrX	stalkie_big_nohaplotig	CDS	67928325	67928408	.	-	0	Parent=comp156718_c0_seq1.mrna1
ChrX	gffcl	locus	67950569	67951041	.	-	.	ID=RLOC_00003874;geneIDs=Dp_FBgn0246681.1.path1;transcripts=Dp_FBgn0246681.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67950569	67951041	.	-	.	ID=Dp_FBgn0246681.1.mrna1;geneID=Dp_FBgn0246681.1.path1;Name=Dp_FBgn0246681.1;Dir=indeterminatecoverage=98.5;identity=100.0;matches=473;mismatches=0;indels=0;unknowns=0;Target=Dp_FBgn0246681.1 480 8 .;CDS_Target=Dp_FBgn0246681.1 480 10 .;locus=RLOC_00003874
ChrX	stalkie_big_nohaplotig	exon	67950569	67951041	100	-	.	Parent=Dp_FBgn0246681.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	67950569	67951039	.	-	0	Parent=Dp_FBgn0246681.1.mrna1
ChrX	gffcl	locus	67963587	67963940	.	-	.	ID=RLOC_00003875;geneIDs=comp90745_c0_seq1.path1;transcripts=comp90745_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67963587	67963940	.	-	.	ID=comp90745_c0_seq1.mrna1;geneID=comp90745_c0_seq1.path1;Name=comp90745_c0_seq1;Dir=indeterminatecoverage=98.6;identity=99.4;matches=352;mismatches=2;indels=0;unknowns=0;Target=comp90745_c0_seq1 354 1 .;CDS_Target=comp90745_c0_seq1 137 3 .;locus=RLOC_00003875
ChrX	stalkie_big_nohaplotig	exon	67963587	67963940	99	-	.	Parent=comp90745_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	67963804	67963938	.	-	0	Parent=comp90745_c0_seq1.mrna1
ChrX	gffcl	locus	67966646	67967069	.	-	.	ID=RLOC_00003876;geneIDs=comp93593_c0_seq1.path1;transcripts=comp93593_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67966646	67967069	.	-	.	ID=comp93593_c0_seq1.mrna1;geneID=comp93593_c0_seq1.path1;Name=comp93593_c0_seq1;Dir=indeterminatecoverage=94.0;identity=99.8;matches=423;mismatches=1;indels=0;unknowns=0;Target=comp93593_c0_seq1 450 27 .;CDS_Target=comp93593_c0_seq1 283 29 .;locus=RLOC_00003876
ChrX	stalkie_big_nohaplotig	exon	67966646	67967069	99	-	.	Parent=comp93593_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	67966813	67967067	.	-	0	Parent=comp93593_c0_seq1.mrna1
ChrX	gffcl	locus	67973837	67974308	.	+	.	ID=RLOC_00003877;geneIDs=FBgn0015521.1.path1;transcripts=FBgn0015521.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	67973837	67974308	.	+	.	ID=FBgn0015521.1.mrna1;geneID=FBgn0015521.1.path1;Name=FBgn0015521.1;Dir=sensecoverage=97.8;identity=100.0;matches=264;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003877
ChrX	stalkie_big_nohaplotig	exon	67973837	67973848	100	+	.	Parent=FBgn0015521.1.mrna1;Target=FBgn0015521.1 1 12 +
ChrX	stalkie_big_nohaplotig	exon	67973931	67973989	100	+	.	Parent=FBgn0015521.1.mrna1;Target=FBgn0015521.1 13 71 +
ChrX	stalkie_big_nohaplotig	exon	67974116	67974308	100	+	.	Parent=FBgn0015521.1.mrna1;Target=FBgn0015521.1 72 264 +
ChrX	stalkie_big_nohaplotig	CDS	67973837	67973848	.	+	0	Parent=FBgn0015521.1.mrna1;Target=FBgn0015521.1 1 12 +
ChrX	stalkie_big_nohaplotig	CDS	67973931	67973989	.	+	0	Parent=FBgn0015521.1.mrna1;Target=FBgn0015521.1 13 71 +
ChrX	stalkie_big_nohaplotig	CDS	67974116	67974308	.	+	1	Parent=FBgn0015521.1.mrna1;Target=FBgn0015521.1 72 264 +
ChrX	gffcl	locus	68017787	68029310	.	+	.	ID=RLOC_00003878;geneIDs=FBgn0031474.1.path1;transcripts=FBgn0031474.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68017787	68029310	.	+	.	ID=FBgn0031474.1.mrna1;geneID=FBgn0031474.1.path1;Name=FBgn0031474.1;Dir=sensecoverage=94.1;identity=99.9;matches=1678;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003878
ChrX	stalkie_big_nohaplotig	exon	68017787	68018215	99	+	.	Parent=FBgn0031474.1.mrna1;Target=FBgn0031474.1 106 534 +
ChrX	stalkie_big_nohaplotig	exon	68018283	68018378	100	+	.	Parent=FBgn0031474.1.mrna1;Target=FBgn0031474.1 535 630 +
ChrX	stalkie_big_nohaplotig	exon	68025882	68026291	99	+	.	Parent=FBgn0031474.1.mrna1;Target=FBgn0031474.1 631 1040 +
ChrX	stalkie_big_nohaplotig	exon	68026390	68026806	100	+	.	Parent=FBgn0031474.1.mrna1;Target=FBgn0031474.1 1041 1457 +
ChrX	stalkie_big_nohaplotig	exon	68028983	68029310	100	+	.	Parent=FBgn0031474.1.mrna1;Target=FBgn0031474.1 1458 1785 +
ChrX	stalkie_big_nohaplotig	CDS	68017787	68018215	.	+	0	Parent=FBgn0031474.1.mrna1;Target=FBgn0031474.1 106 534 +
ChrX	stalkie_big_nohaplotig	CDS	68018283	68018378	.	+	0	Parent=FBgn0031474.1.mrna1;Target=FBgn0031474.1 535 630 +
ChrX	stalkie_big_nohaplotig	CDS	68025882	68026291	.	+	0	Parent=FBgn0031474.1.mrna1;Target=FBgn0031474.1 631 1040 +
ChrX	stalkie_big_nohaplotig	CDS	68026390	68026806	.	+	1	Parent=FBgn0031474.1.mrna1;Target=FBgn0031474.1 1041 1457 +
ChrX	stalkie_big_nohaplotig	CDS	68028983	68029310	.	+	1	Parent=FBgn0031474.1.mrna1;Target=FBgn0031474.1 1458 1785 +
ChrX	gffcl	locus	68033102	68033417	.	-	.	ID=RLOC_00003879;geneIDs=comp152381_c0_seq1.path1;transcripts=comp152381_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68033102	68033417	.	-	.	ID=comp152381_c0_seq1.mrna1;geneID=comp152381_c0_seq1.path1;Name=comp152381_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=316;mismatches=0;indels=0;unknowns=0;Target=comp152381_c0_seq1 316 1 .;CDS_Target=comp152381_c0_seq1 172 71 .;locus=RLOC_00003879
ChrX	stalkie_big_nohaplotig	exon	68033102	68033417	100	-	.	Parent=comp152381_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68033246	68033347	.	-	0	Parent=comp152381_c0_seq1.mrna1
ChrX	gffcl	locus	68035149	68036202	.	+	.	ID=RLOC_00003880;geneIDs=ORF2174.path1;transcripts=ORF2174.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68035149	68036202	.	+	.	ID=ORF2174.mrna1;geneID=ORF2174.path1;Name=ORF2174;Dir=indeterminatecoverage=100.0;identity=99.6;matches=899;mismatches=4;indels=0;unknowns=0;locus=RLOC_00003880
ChrX	stalkie_big_nohaplotig	exon	68035149	68035332	100	+	.	Parent=ORF2174.mrna1;Target=ORF2174 184 1 .
ChrX	stalkie_big_nohaplotig	exon	68035400	68035724	100	+	.	Parent=ORF2174.mrna1;Target=ORF2174 509 185 .
ChrX	stalkie_big_nohaplotig	exon	68035809	68036202	98	+	.	Parent=ORF2174.mrna1;Target=ORF2174 903 510 .
ChrX	stalkie_big_nohaplotig	CDS	68035149	68035332	.	+	0	Parent=ORF2174.mrna1;Target=ORF2174 184 1 .
ChrX	stalkie_big_nohaplotig	CDS	68035400	68035724	.	+	2	Parent=ORF2174.mrna1;Target=ORF2174 509 185 .
ChrX	stalkie_big_nohaplotig	CDS	68035809	68036202	.	+	1	Parent=ORF2174.mrna1;Target=ORF2174 903 510 .
ChrX	stalkie_big_nohaplotig	mRNA	68037957	68039059	.	-	.	ID=comp117835_c0_seq1.mrna1;geneID=comp117835_c0_seq1.path1;Name=comp117835_c0_seq1;Dir=sensecoverage=100.0;identity=96.3;matches=488;mismatches=17;indels=2;unknowns=0;Target=comp117835_c0_seq1 353 463 +;locus=RLOC_00003881
ChrX	stalkie_big_nohaplotig	exon	68037957	68037979	100	-	.	Parent=comp117835_c0_seq1.mrna1;Target=comp117835_c0_seq1 485 507 +
ChrX	stalkie_big_nohaplotig	exon	68038578	68039059	96	-	.	Parent=comp117835_c0_seq1.mrna1;Target=comp117835_c0_seq1 1 484 +
ChrX	stalkie_big_nohaplotig	CDS	68038599	68038709	.	-	0	Parent=comp117835_c0_seq1.mrna1
ChrX	gffcl	locus	68042145	68042549	.	+	.	ID=RLOC_00003882;geneIDs=Dp_FBgn0075457.1.path1;transcripts=Dp_FBgn0075457.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68042145	68042549	.	+	.	ID=Dp_FBgn0075457.1.mrna1;geneID=Dp_FBgn0075457.1.path1;Name=Dp_FBgn0075457.1;Dir=indeterminatecoverage=75.4;identity=99.8;matches=404;mismatches=1;indels=0;unknowns=0;Target=Dp_FBgn0075457.1 405 1 .;locus=RLOC_00003882
ChrX	stalkie_big_nohaplotig	exon	68042145	68042549	99	+	.	Parent=Dp_FBgn0075457.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68042145	68042549	.	+	0	Parent=Dp_FBgn0075457.1.mrna1
ChrX	gffcl	locus	68062089	68063816	.	-	.	ID=RLOC_00003883;geneIDs=comp148847_c0_seq1.path1;transcripts=comp148847_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68062089	68063816	.	-	.	ID=comp148847_c0_seq1.mrna1;geneID=comp148847_c0_seq1.path1;Name=comp148847_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.7;matches=1728;mismatches=0;indels=5;unknowns=0;Target=comp148847_c0_seq1 1733 1 .;CDS_Target=comp148847_c0_seq1 159 67 .;locus=RLOC_00003883
ChrX	stalkie_big_nohaplotig	exon	68062089	68063816	99	-	.	Parent=comp148847_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68063658	68063750	.	-	0	Parent=comp148847_c0_seq1.mrna1
ChrX	gffcl	locus	68065297	68082166	.	-	.	ID=RLOC_00003884;geneIDs=FBgn0051694.1.path1;transcripts=FBgn0051694.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68065297	68082166	.	-	.	ID=FBgn0051694.1.mrna1;geneID=FBgn0051694.1.path1;Name=FBgn0051694.1;Dir=sensecoverage=100.0;identity=99.7;matches=1513;mismatches=0;indels=5;unknowns=0;locus=RLOC_00003884
ChrX	stalkie_big_nohaplotig	exon	68065297	68065377	100	-	.	Parent=FBgn0051694.1.mrna1;Target=FBgn0051694.1 1438 1518 +
ChrX	stalkie_big_nohaplotig	exon	68065443	68065664	100	-	.	Parent=FBgn0051694.1.mrna1;Target=FBgn0051694.1 1216 1437 +
ChrX	stalkie_big_nohaplotig	exon	68067203	68067446	100	-	.	Parent=FBgn0051694.1.mrna1;Target=FBgn0051694.1 972 1215 +
ChrX	stalkie_big_nohaplotig	exon	68067517	68068213	100	-	.	Parent=FBgn0051694.1.mrna1;Target=FBgn0051694.1 275 971 +
ChrX	stalkie_big_nohaplotig	exon	68081898	68082166	98	-	.	Parent=FBgn0051694.1.mrna1;Target=FBgn0051694.1 1 274 +
ChrX	stalkie_big_nohaplotig	CDS	68065297	68065377	.	-	0	Parent=FBgn0051694.1.mrna1;Target=FBgn0051694.1 1438 1518 +
ChrX	stalkie_big_nohaplotig	CDS	68065443	68065664	.	-	0	Parent=FBgn0051694.1.mrna1;Target=FBgn0051694.1 1216 1437 +
ChrX	stalkie_big_nohaplotig	CDS	68067203	68067446	.	-	1	Parent=FBgn0051694.1.mrna1;Target=FBgn0051694.1 972 1215 +
ChrX	stalkie_big_nohaplotig	CDS	68067517	68068213	.	-	2	Parent=FBgn0051694.1.mrna1;Target=FBgn0051694.1 275 971 +
ChrX	stalkie_big_nohaplotig	CDS	68081898	68081928	.	-	0	Parent=FBgn0051694.1.mrna1;Target=FBgn0051694.1 244 274 +
ChrX	stalkie_big_nohaplotig	mRNA	68632235	68633298	.	+	.	ID=ORF2477.mrna1;geneID=ORF2477.path1;Name=ORF2477;Dir=sensecoverage=100.0;identity=99.5;matches=848;mismatches=4;indels=0;unknowns=0;locus=RLOC_00003885
ChrX	stalkie_big_nohaplotig	exon	68632235	68632526	99	+	.	Parent=ORF2477.mrna1;Target=ORF2477 1 292 +
ChrX	stalkie_big_nohaplotig	exon	68632739	68633298	99	+	.	Parent=ORF2477.mrna1;Target=ORF2477 293 852 +
ChrX	stalkie_big_nohaplotig	CDS	68632235	68632526	.	+	0	Parent=ORF2477.mrna1;Target=ORF2477 1 292 +
ChrX	stalkie_big_nohaplotig	CDS	68632739	68633298	.	+	2	Parent=ORF2477.mrna1;Target=ORF2477 293 852 +
ChrX	gffcl	locus	68105768	68106771	.	+	.	ID=RLOC_00003886;geneIDs=FBgn0031479.1.path1;transcripts=FBgn0031479.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68105768	68106771	.	+	.	ID=FBgn0031479.1.mrna1;geneID=FBgn0031479.1.path1;Name=FBgn0031479.1;Dir=sensecoverage=100.0;identity=100.0;matches=675;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003886
ChrX	stalkie_big_nohaplotig	exon	68105768	68105874	100	+	.	Parent=FBgn0031479.1.mrna1;Target=FBgn0031479.1 1 107 +
ChrX	stalkie_big_nohaplotig	exon	68105932	68106107	100	+	.	Parent=FBgn0031479.1.mrna1;Target=FBgn0031479.1 108 283 +
ChrX	stalkie_big_nohaplotig	exon	68106165	68106357	100	+	.	Parent=FBgn0031479.1.mrna1;Target=FBgn0031479.1 284 476 +
ChrX	stalkie_big_nohaplotig	exon	68106513	68106585	100	+	.	Parent=FBgn0031479.1.mrna1;Target=FBgn0031479.1 477 549 +
ChrX	stalkie_big_nohaplotig	exon	68106646	68106771	100	+	.	Parent=FBgn0031479.1.mrna1;Target=FBgn0031479.1 550 675 +
ChrX	stalkie_big_nohaplotig	CDS	68105768	68105874	.	+	0	Parent=FBgn0031479.1.mrna1;Target=FBgn0031479.1 1 107 +
ChrX	stalkie_big_nohaplotig	CDS	68105932	68106107	.	+	1	Parent=FBgn0031479.1.mrna1;Target=FBgn0031479.1 108 283 +
ChrX	stalkie_big_nohaplotig	CDS	68106165	68106357	.	+	2	Parent=FBgn0031479.1.mrna1;Target=FBgn0031479.1 284 476 +
ChrX	stalkie_big_nohaplotig	CDS	68106513	68106585	.	+	1	Parent=FBgn0031479.1.mrna1;Target=FBgn0031479.1 477 549 +
ChrX	stalkie_big_nohaplotig	CDS	68106646	68106771	.	+	0	Parent=FBgn0031479.1.mrna1;Target=FBgn0031479.1 550 675 +
ChrX	gffcl	locus	68113194	68123922	.	+	.	ID=RLOC_00003887;geneIDs=FBgn0019830.1.path1;transcripts=FBgn0019830.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68113194	68123922	.	+	.	ID=FBgn0019830.1.mrna1;geneID=FBgn0019830.1.path1;Name=FBgn0019830.1;Dir=sensecoverage=100.0;identity=100.0;matches=948;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003887
ChrX	stalkie_big_nohaplotig	exon	68113194	68113343	100	+	.	Parent=FBgn0019830.1.mrna1;Target=FBgn0019830.1 1 150 +
ChrX	stalkie_big_nohaplotig	exon	68113406	68113838	100	+	.	Parent=FBgn0019830.1.mrna1;Target=FBgn0019830.1 151 583 +
ChrX	stalkie_big_nohaplotig	exon	68123489	68123668	100	+	.	Parent=FBgn0019830.1.mrna1;Target=FBgn0019830.1 584 763 +
ChrX	stalkie_big_nohaplotig	exon	68123738	68123922	100	+	.	Parent=FBgn0019830.1.mrna1;Target=FBgn0019830.1 764 948 +
ChrX	stalkie_big_nohaplotig	CDS	68113194	68113343	.	+	0	Parent=FBgn0019830.1.mrna1;Target=FBgn0019830.1 1 150 +
ChrX	stalkie_big_nohaplotig	CDS	68113406	68113838	.	+	0	Parent=FBgn0019830.1.mrna1;Target=FBgn0019830.1 151 583 +
ChrX	stalkie_big_nohaplotig	CDS	68123489	68123668	.	+	2	Parent=FBgn0019830.1.mrna1;Target=FBgn0019830.1 584 763 +
ChrX	stalkie_big_nohaplotig	CDS	68123738	68123922	.	+	2	Parent=FBgn0019830.1.mrna1;Target=FBgn0019830.1 764 948 +
ChrX	gffcl	locus	68114707	68116581	.	-	.	ID=RLOC_00003888;geneIDs=Dp_FBgn0250446.1.path1;transcripts=Dp_FBgn0250446.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68114707	68116581	.	-	.	ID=Dp_FBgn0250446.1.mrna1;geneID=Dp_FBgn0250446.1.path1;Name=Dp_FBgn0250446.1;Dir=sensecoverage=100.0;identity=99.9;matches=1682;mismatches=0;indels=1;unknowns=0;locus=RLOC_00003888
ChrX	stalkie_big_nohaplotig	exon	68114707	68114891	99	-	.	Parent=Dp_FBgn0250446.1.mrna1;Target=Dp_FBgn0250446.1 1498 1683 +
ChrX	stalkie_big_nohaplotig	exon	68114946	68115847	100	-	.	Parent=Dp_FBgn0250446.1.mrna1;Target=Dp_FBgn0250446.1 596 1497 +
ChrX	stalkie_big_nohaplotig	exon	68115987	68116581	100	-	.	Parent=Dp_FBgn0250446.1.mrna1;Target=Dp_FBgn0250446.1 1 595 +
ChrX	stalkie_big_nohaplotig	CDS	68114707	68114891	.	-	0	Parent=Dp_FBgn0250446.1.mrna1;Target=Dp_FBgn0250446.1 1498 1683 +
ChrX	stalkie_big_nohaplotig	CDS	68114946	68115847	.	-	2	Parent=Dp_FBgn0250446.1.mrna1;Target=Dp_FBgn0250446.1 596 1497 +
ChrX	stalkie_big_nohaplotig	CDS	68115987	68116581	.	-	0	Parent=Dp_FBgn0250446.1.mrna1;Target=Dp_FBgn0250446.1 1 595 +
ChrX	gffcl	locus	68119246	68120121	.	-	.	ID=RLOC_00003889;geneIDs=comp144727_c0_seq1.path1;transcripts=comp144727_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68119246	68120121	.	-	.	ID=comp144727_c0_seq1.mrna1;geneID=comp144727_c0_seq1.path1;Name=comp144727_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.7;matches=874;mismatches=2;indels=1;unknowns=0;Target=comp144727_c0_seq1 879 3 .;CDS_Target=comp144727_c0_seq1 542 480 .;locus=RLOC_00003889
ChrX	stalkie_big_nohaplotig	exon	68119246	68120121	99	-	.	Parent=comp144727_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68119583	68119644	.	-	0	Parent=comp144727_c0_seq1.mrna1
ChrX	gffcl	locus	68121954	68122815	.	+	.	ID=RLOC_00003890;geneIDs=comp156272_c0_seq1.path1;transcripts=comp156272_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68121954	68122815	.	+	.	ID=comp156272_c0_seq1.mrna1;geneID=comp156272_c0_seq1.path1;Name=comp156272_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=862;mismatches=0;indels=0;unknowns=0;Target=comp156272_c0_seq1 862 1 .;CDS_Target=comp156272_c0_seq1 544 470 .;locus=RLOC_00003890
ChrX	stalkie_big_nohaplotig	exon	68121954	68122815	100	+	.	Parent=comp156272_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68122423	68122497	.	+	0	Parent=comp156272_c0_seq1.mrna1
ChrX	gffcl	locus	68126916	68138528	.	-	.	ID=RLOC_00003891;geneIDs=FBgn0039972.1.path1;transcripts=FBgn0039972.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68126916	68138528	.	-	.	ID=FBgn0039972.1.mrna1;geneID=FBgn0039972.1.path1;Name=FBgn0039972.1;Dir=sensecoverage=100.0;identity=99.6;matches=4189;mismatches=10;indels=6;unknowns=0;locus=RLOC_00003891
ChrX	stalkie_big_nohaplotig	exon	68126916	68127038	100	-	.	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 4084 4206 +
ChrX	stalkie_big_nohaplotig	exon	68128461	68128526	100	-	.	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 4018 4083 +
ChrX	stalkie_big_nohaplotig	exon	68128592	68129583	99	-	.	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 3026 4017 +
ChrX	stalkie_big_nohaplotig	exon	68129647	68129754	100	-	.	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 2918 3025 +
ChrX	stalkie_big_nohaplotig	exon	68129832	68129985	100	-	.	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 2764 2917 +
ChrX	stalkie_big_nohaplotig	exon	68130041	68130277	94	-	.	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 2521 2763 +
ChrX	stalkie_big_nohaplotig	exon	68131531	68133036	99	-	.	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 1015 2520 +
ChrX	stalkie_big_nohaplotig	exon	68133100	68133231	100	-	.	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 883 1014 +
ChrX	stalkie_big_nohaplotig	exon	68133290	68133543	100	-	.	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 629 882 +
ChrX	stalkie_big_nohaplotig	exon	68137770	68137794	100	-	.	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 604 628 +
ChrX	stalkie_big_nohaplotig	exon	68137862	68138423	100	-	.	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 42 603 +
ChrX	stalkie_big_nohaplotig	exon	68138489	68138528	100	-	.	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 2 41 +
ChrX	stalkie_big_nohaplotig	CDS	68126916	68127038	.	-	0	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 4084 4206 +
ChrX	stalkie_big_nohaplotig	CDS	68128461	68128526	.	-	0	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 4018 4083 +
ChrX	stalkie_big_nohaplotig	CDS	68128592	68129583	.	-	2	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 3026 4017 +
ChrX	stalkie_big_nohaplotig	CDS	68129647	68129754	.	-	2	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 2918 3025 +
ChrX	stalkie_big_nohaplotig	CDS	68129832	68129985	.	-	0	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 2764 2917 +
ChrX	stalkie_big_nohaplotig	CDS	68130041	68130277	.	-	0	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 2521 2763 +
ChrX	stalkie_big_nohaplotig	CDS	68131531	68133036	.	-	0	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 1015 2520 +
ChrX	stalkie_big_nohaplotig	CDS	68133100	68133231	.	-	0	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 883 1014 +
ChrX	stalkie_big_nohaplotig	CDS	68133290	68133543	.	-	2	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 629 882 +
ChrX	stalkie_big_nohaplotig	CDS	68137770	68137794	.	-	0	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 604 628 +
ChrX	stalkie_big_nohaplotig	CDS	68137862	68138423	.	-	1	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 42 603 +
ChrX	stalkie_big_nohaplotig	CDS	68138489	68138526	.	-	0	Parent=FBgn0039972.1.mrna1;Target=FBgn0039972.1 4 41 +
ChrX	gffcl	locus	68169326	68169593	.	+	.	ID=RLOC_00003892;geneIDs=comp118493_c0_seq1.path1;transcripts=comp118493_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68169326	68169593	.	+	.	ID=comp118493_c0_seq1.mrna1;geneID=comp118493_c0_seq1.path1;Name=comp118493_c0_seq1;Dir=indeterminatecoverage=92.7;identity=100.0;matches=268;mismatches=0;indels=0;unknowns=0;Target=comp118493_c0_seq1 289 22 .;CDS_Target=comp118493_c0_seq1 42 22 .;locus=RLOC_00003892
ChrX	stalkie_big_nohaplotig	exon	68169326	68169593	100	+	.	Parent=comp118493_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68169326	68169346	.	+	0	Parent=comp118493_c0_seq1.mrna1
ChrX	gffcl	locus	68220424	68298286	.	+	.	ID=RLOC_00003894;geneIDs=FBgn0058006.1.path1,comp156286_c0_seq1.path1;transcripts=FBgn0058006.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68220424	68297229	.	+	.	ID=FBgn0058006.1.mrna1;geneID=FBgn0058006.1.path1;Name=FBgn0058006.1;Dir=sensecoverage=100.0;identity=99.9;matches=2345;mismatches=2;indels=0;unknowns=2;locus=RLOC_00003894
ChrX	stalkie_big_nohaplotig	exon	68220424	68220706	100	+	.	Parent=FBgn0058006.1.mrna1;Target=FBgn0058006.1 1 283 +
ChrX	stalkie_big_nohaplotig	exon	68260844	68260935	100	+	.	Parent=FBgn0058006.1.mrna1;Target=FBgn0058006.1 284 375 +
ChrX	stalkie_big_nohaplotig	exon	68261369	68261529	98	+	.	Parent=FBgn0058006.1.mrna1;Target=FBgn0058006.1 376 536 +
ChrX	stalkie_big_nohaplotig	exon	68261618	68261762	100	+	.	Parent=FBgn0058006.1.mrna1;Target=FBgn0058006.1 537 681 +
ChrX	stalkie_big_nohaplotig	exon	68286292	68286492	100	+	.	Parent=FBgn0058006.1.mrna1;Target=FBgn0058006.1 682 882 +
ChrX	stalkie_big_nohaplotig	exon	68286553	68286780	100	+	.	Parent=FBgn0058006.1.mrna1;Target=FBgn0058006.1 883 1110 +
ChrX	stalkie_big_nohaplotig	exon	68287225	68287342	100	+	.	Parent=FBgn0058006.1.mrna1;Target=FBgn0058006.1 1111 1228 +
ChrX	stalkie_big_nohaplotig	exon	68290573	68290739	100	+	.	Parent=FBgn0058006.1.mrna1;Target=FBgn0058006.1 1229 1395 +
ChrX	stalkie_big_nohaplotig	exon	68296039	68296164	100	+	.	Parent=FBgn0058006.1.mrna1;Target=FBgn0058006.1 1396 1521 +
ChrX	stalkie_big_nohaplotig	exon	68296228	68296779	100	+	.	Parent=FBgn0058006.1.mrna1;Target=FBgn0058006.1 1522 2073 +
ChrX	stalkie_big_nohaplotig	exon	68296954	68297229	100	+	.	Parent=FBgn0058006.1.mrna1;Target=FBgn0058006.1 2074 2349 +
ChrX	stalkie_big_nohaplotig	CDS	68220424	68220706	.	+	0	Parent=FBgn0058006.1.mrna1;Target=FBgn0058006.1 1 283 +
ChrX	stalkie_big_nohaplotig	CDS	68260844	68260935	.	+	2	Parent=FBgn0058006.1.mrna1;Target=FBgn0058006.1 284 375 +
ChrX	stalkie_big_nohaplotig	CDS	68261369	68261529	.	+	0	Parent=FBgn0058006.1.mrna1;Target=FBgn0058006.1 376 536 +
ChrX	stalkie_big_nohaplotig	CDS	68261618	68261762	.	+	1	Parent=FBgn0058006.1.mrna1;Target=FBgn0058006.1 537 681 +
ChrX	stalkie_big_nohaplotig	CDS	68286292	68286492	.	+	0	Parent=FBgn0058006.1.mrna1;Target=FBgn0058006.1 682 882 +
ChrX	stalkie_big_nohaplotig	CDS	68286553	68286780	.	+	0	Parent=FBgn0058006.1.mrna1;Target=FBgn0058006.1 883 1110 +
ChrX	stalkie_big_nohaplotig	CDS	68287225	68287342	.	+	0	Parent=FBgn0058006.1.mrna1;Target=FBgn0058006.1 1111 1228 +
ChrX	stalkie_big_nohaplotig	CDS	68290573	68290739	.	+	2	Parent=FBgn0058006.1.mrna1;Target=FBgn0058006.1 1229 1395 +
ChrX	stalkie_big_nohaplotig	CDS	68296039	68296164	.	+	0	Parent=FBgn0058006.1.mrna1;Target=FBgn0058006.1 1396 1521 +
ChrX	stalkie_big_nohaplotig	CDS	68296228	68296779	.	+	0	Parent=FBgn0058006.1.mrna1;Target=FBgn0058006.1 1522 2073 +
ChrX	stalkie_big_nohaplotig	CDS	68296954	68297229	.	+	0	Parent=FBgn0058006.1.mrna1;Target=FBgn0058006.1 2074 2349 +
ChrX	gffcl	locus	68304525	68310251	.	+	.	ID=RLOC_00003895;geneIDs=FBgn0037440.1.path1;transcripts=FBgn0037440.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68304525	68310251	.	+	.	ID=FBgn0037440.1.mrna1;geneID=FBgn0037440.1.path1;Name=FBgn0037440.1;Dir=sensecoverage=99.7;identity=99.9;matches=1983;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003895
ChrX	stalkie_big_nohaplotig	exon	68304525	68304636	100	+	.	Parent=FBgn0037440.1.mrna1;Target=FBgn0037440.1 6 117 +
ChrX	stalkie_big_nohaplotig	exon	68305918	68306538	100	+	.	Parent=FBgn0037440.1.mrna1;Target=FBgn0037440.1 118 738 +
ChrX	stalkie_big_nohaplotig	exon	68306596	68306943	99	+	.	Parent=FBgn0037440.1.mrna1;Target=FBgn0037440.1 739 1086 +
ChrX	stalkie_big_nohaplotig	exon	68307856	68307956	100	+	.	Parent=FBgn0037440.1.mrna1;Target=FBgn0037440.1 1087 1187 +
ChrX	stalkie_big_nohaplotig	exon	68309358	68309600	100	+	.	Parent=FBgn0037440.1.mrna1;Target=FBgn0037440.1 1188 1430 +
ChrX	stalkie_big_nohaplotig	exon	68309693	68310251	100	+	.	Parent=FBgn0037440.1.mrna1;Target=FBgn0037440.1 1431 1989 +
ChrX	stalkie_big_nohaplotig	CDS	68304526	68304636	.	+	0	Parent=FBgn0037440.1.mrna1;Target=FBgn0037440.1 7 117 +
ChrX	stalkie_big_nohaplotig	CDS	68305918	68306538	.	+	0	Parent=FBgn0037440.1.mrna1;Target=FBgn0037440.1 118 738 +
ChrX	stalkie_big_nohaplotig	CDS	68306596	68306943	.	+	0	Parent=FBgn0037440.1.mrna1;Target=FBgn0037440.1 739 1086 +
ChrX	stalkie_big_nohaplotig	CDS	68307856	68307956	.	+	0	Parent=FBgn0037440.1.mrna1;Target=FBgn0037440.1 1087 1187 +
ChrX	stalkie_big_nohaplotig	CDS	68309358	68309600	.	+	1	Parent=FBgn0037440.1.mrna1;Target=FBgn0037440.1 1188 1430 +
ChrX	stalkie_big_nohaplotig	CDS	68309693	68310251	.	+	1	Parent=FBgn0037440.1.mrna1;Target=FBgn0037440.1 1431 1989 +
ChrX	gffcl	locus	68310600	68311116	.	-	.	ID=RLOC_00003896;geneIDs=FBgn0261386.1.path1;transcripts=FBgn0261386.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68310600	68311116	.	-	.	ID=FBgn0261386.1.mrna1;geneID=FBgn0261386.1.path1;Name=FBgn0261386.1;Dir=sensecoverage=100.0;identity=100.0;matches=420;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003896
ChrX	stalkie_big_nohaplotig	exon	68310600	68310689	100	-	.	Parent=FBgn0261386.1.mrna1;Target=FBgn0261386.1 331 420 +
ChrX	stalkie_big_nohaplotig	exon	68310787	68311116	100	-	.	Parent=FBgn0261386.1.mrna1;Target=FBgn0261386.1 1 330 +
ChrX	stalkie_big_nohaplotig	CDS	68310600	68310689	.	-	0	Parent=FBgn0261386.1.mrna1;Target=FBgn0261386.1 331 420 +
ChrX	stalkie_big_nohaplotig	CDS	68310787	68311116	.	-	0	Parent=FBgn0261386.1.mrna1;Target=FBgn0261386.1 1 330 +
ChrX	gffcl	locus	68314311	68324962	.	+	.	ID=RLOC_00003897;geneIDs=FBgn0040038.2.path1;transcripts=FBgn0040038.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68314311	68324962	.	+	.	ID=FBgn0040038.2.mrna1;geneID=FBgn0040038.2.path1;Name=FBgn0040038.2;Dir=sensecoverage=100.0;identity=100.0;matches=2073;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003897
ChrX	stalkie_big_nohaplotig	exon	68314311	68314534	100	+	.	Parent=FBgn0040038.2.mrna1;Target=FBgn0040038.2 1 224 +
ChrX	stalkie_big_nohaplotig	exon	68318059	68318328	100	+	.	Parent=FBgn0040038.2.mrna1;Target=FBgn0040038.2 225 494 +
ChrX	stalkie_big_nohaplotig	exon	68318696	68318960	100	+	.	Parent=FBgn0040038.2.mrna1;Target=FBgn0040038.2 495 759 +
ChrX	stalkie_big_nohaplotig	exon	68322447	68322569	100	+	.	Parent=FBgn0040038.2.mrna1;Target=FBgn0040038.2 760 882 +
ChrX	stalkie_big_nohaplotig	exon	68322633	68322908	100	+	.	Parent=FBgn0040038.2.mrna1;Target=FBgn0040038.2 883 1158 +
ChrX	stalkie_big_nohaplotig	exon	68323009	68323219	100	+	.	Parent=FBgn0040038.2.mrna1;Target=FBgn0040038.2 1159 1369 +
ChrX	stalkie_big_nohaplotig	exon	68324072	68324417	100	+	.	Parent=FBgn0040038.2.mrna1;Target=FBgn0040038.2 1370 1715 +
ChrX	stalkie_big_nohaplotig	exon	68324485	68324830	100	+	.	Parent=FBgn0040038.2.mrna1;Target=FBgn0040038.2 1716 2061 +
ChrX	stalkie_big_nohaplotig	exon	68324951	68324962	100	+	.	Parent=FBgn0040038.2.mrna1;Target=FBgn0040038.2 2062 2073 +
ChrX	stalkie_big_nohaplotig	CDS	68314311	68314534	.	+	0	Parent=FBgn0040038.2.mrna1;Target=FBgn0040038.2 1 224 +
ChrX	stalkie_big_nohaplotig	CDS	68318059	68318328	.	+	1	Parent=FBgn0040038.2.mrna1;Target=FBgn0040038.2 225 494 +
ChrX	stalkie_big_nohaplotig	CDS	68318696	68318960	.	+	1	Parent=FBgn0040038.2.mrna1;Target=FBgn0040038.2 495 759 +
ChrX	stalkie_big_nohaplotig	CDS	68322447	68322569	.	+	0	Parent=FBgn0040038.2.mrna1;Target=FBgn0040038.2 760 882 +
ChrX	stalkie_big_nohaplotig	CDS	68322633	68322908	.	+	0	Parent=FBgn0040038.2.mrna1;Target=FBgn0040038.2 883 1158 +
ChrX	stalkie_big_nohaplotig	CDS	68323009	68323219	.	+	0	Parent=FBgn0040038.2.mrna1;Target=FBgn0040038.2 1159 1369 +
ChrX	stalkie_big_nohaplotig	CDS	68324072	68324417	.	+	2	Parent=FBgn0040038.2.mrna1;Target=FBgn0040038.2 1370 1715 +
ChrX	stalkie_big_nohaplotig	CDS	68324485	68324830	.	+	1	Parent=FBgn0040038.2.mrna1;Target=FBgn0040038.2 1716 2061 +
ChrX	stalkie_big_nohaplotig	CDS	68324951	68324962	.	+	0	Parent=FBgn0040038.2.mrna1;Target=FBgn0040038.2 2062 2073 +
ChrX	gffcl	locus	68328472	68329062	.	+	.	ID=RLOC_00003898;geneIDs=FBgn0063368.1.path1;transcripts=FBgn0063368.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68328472	68329062	.	+	.	ID=FBgn0063368.1.mrna1;geneID=FBgn0063368.1.path1;Name=FBgn0063368.1;Dir=sensecoverage=99.6;identity=100.0;matches=526;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003898
ChrX	stalkie_big_nohaplotig	exon	68328472	68328510	100	+	.	Parent=FBgn0063368.1.mrna1;Target=FBgn0063368.1 3 41 +
ChrX	stalkie_big_nohaplotig	exon	68328576	68329062	100	+	.	Parent=FBgn0063368.1.mrna1;Target=FBgn0063368.1 42 528 +
ChrX	stalkie_big_nohaplotig	CDS	68328473	68328510	.	+	0	Parent=FBgn0063368.1.mrna1;Target=FBgn0063368.1 4 41 +
ChrX	stalkie_big_nohaplotig	CDS	68328576	68329062	.	+	1	Parent=FBgn0063368.1.mrna1;Target=FBgn0063368.1 42 528 +
ChrX	gffcl	locus	68332813	68333985	.	-	.	ID=RLOC_00003899;geneIDs=FBgn0058042.1.path1;transcripts=FBgn0058042.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68332813	68333985	.	-	.	ID=FBgn0058042.1.mrna1;geneID=FBgn0058042.1.path1;Name=FBgn0058042.1;Dir=sensecoverage=100.0;identity=99.6;matches=672;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003899
ChrX	stalkie_big_nohaplotig	exon	68332813	68332922	100	-	.	Parent=FBgn0058042.1.mrna1;Target=FBgn0058042.1 566 675 +
ChrX	stalkie_big_nohaplotig	exon	68332992	68333161	98	-	.	Parent=FBgn0058042.1.mrna1;Target=FBgn0058042.1 396 565 +
ChrX	stalkie_big_nohaplotig	exon	68333480	68333753	100	-	.	Parent=FBgn0058042.1.mrna1;Target=FBgn0058042.1 122 395 +
ChrX	stalkie_big_nohaplotig	exon	68333865	68333985	100	-	.	Parent=FBgn0058042.1.mrna1;Target=FBgn0058042.1 1 121 +
ChrX	stalkie_big_nohaplotig	CDS	68332813	68332922	.	-	2	Parent=FBgn0058042.1.mrna1;Target=FBgn0058042.1 566 675 +
ChrX	stalkie_big_nohaplotig	CDS	68332992	68333161	.	-	1	Parent=FBgn0058042.1.mrna1;Target=FBgn0058042.1 396 565 +
ChrX	stalkie_big_nohaplotig	CDS	68333480	68333753	.	-	2	Parent=FBgn0058042.1.mrna1;Target=FBgn0058042.1 122 395 +
ChrX	stalkie_big_nohaplotig	CDS	68333865	68333985	.	-	0	Parent=FBgn0058042.1.mrna1;Target=FBgn0058042.1 1 121 +
ChrX	gffcl	locus	68337614	68353740	.	+	.	ID=RLOC_00003900;geneIDs=FBgn0039958.1.path1;transcripts=FBgn0039958.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68337614	68353740	.	+	.	ID=FBgn0039958.1.mrna1;geneID=FBgn0039958.1.path1;Name=FBgn0039958.1;Dir=sensecoverage=100.0;identity=100.0;matches=1083;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003900
ChrX	stalkie_big_nohaplotig	exon	68337614	68337764	100	+	.	Parent=FBgn0039958.1.mrna1;Target=FBgn0039958.1 1 151 +
ChrX	stalkie_big_nohaplotig	exon	68347597	68347730	100	+	.	Parent=FBgn0039958.1.mrna1;Target=FBgn0039958.1 152 285 +
ChrX	stalkie_big_nohaplotig	exon	68352811	68352933	100	+	.	Parent=FBgn0039958.1.mrna1;Target=FBgn0039958.1 286 408 +
ChrX	stalkie_big_nohaplotig	exon	68353008	68353545	100	+	.	Parent=FBgn0039958.1.mrna1;Target=FBgn0039958.1 409 946 +
ChrX	stalkie_big_nohaplotig	exon	68353604	68353740	100	+	.	Parent=FBgn0039958.1.mrna1;Target=FBgn0039958.1 947 1083 +
ChrX	stalkie_big_nohaplotig	CDS	68337614	68337764	.	+	0	Parent=FBgn0039958.1.mrna1;Target=FBgn0039958.1 1 151 +
ChrX	stalkie_big_nohaplotig	CDS	68347597	68347730	.	+	2	Parent=FBgn0039958.1.mrna1;Target=FBgn0039958.1 152 285 +
ChrX	stalkie_big_nohaplotig	CDS	68352811	68352933	.	+	0	Parent=FBgn0039958.1.mrna1;Target=FBgn0039958.1 286 408 +
ChrX	stalkie_big_nohaplotig	CDS	68353008	68353545	.	+	0	Parent=FBgn0039958.1.mrna1;Target=FBgn0039958.1 409 946 +
ChrX	stalkie_big_nohaplotig	CDS	68353604	68353740	.	+	2	Parent=FBgn0039958.1.mrna1;Target=FBgn0039958.1 947 1083 +
ChrX	gffcl	locus	68354612	68358268	.	-	.	ID=RLOC_00003901;geneIDs=comp161417_c1_seq1.path1;transcripts=comp161417_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68354612	68358268	.	-	.	ID=comp161417_c1_seq1.mrna1;geneID=comp161417_c1_seq1.path1;Name=comp161417_c1_seq1;Dir=indeterminatecoverage=99.9;identity=93.8;matches=3632;mismatches=23;indels=217;unknowns=0;Target=comp161417_c1_seq1 3875 6 .;CDS_Target=comp161417_c1_seq1 3858 3733 .;locus=RLOC_00003901
ChrX	stalkie_big_nohaplotig	exon	68354612	68358268	93	-	.	Parent=comp161417_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68354629	68354754	.	-	0	Parent=comp161417_c1_seq1.mrna1
ChrX	gffcl	locus	68365247	68367847	.	-	.	ID=RLOC_00003902;geneIDs=FBgn0021776.1.path1;transcripts=FBgn0021776.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68365247	68367847	.	-	.	ID=FBgn0021776.1.mrna1;geneID=FBgn0021776.1.path1;Name=FBgn0021776.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2601;mismatches=0;indels=0;unknowns=0;Target=FBgn0021776.1 2601 1 .;locus=RLOC_00003902
ChrX	stalkie_big_nohaplotig	exon	68365247	68367847	100	-	.	Parent=FBgn0021776.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68365247	68367847	.	-	0	Parent=FBgn0021776.1.mrna1
ChrX	gffcl	locus	68390322	68406514	.	+	.	ID=RLOC_00003903;geneIDs=FBgn0259749.1.path1;transcripts=FBgn0259749.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68390322	68406514	.	+	.	ID=FBgn0259749.1.mrna1;geneID=FBgn0259749.1.path1;Name=FBgn0259749.1;Dir=sensecoverage=100.0;identity=100.0;matches=1461;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003903
ChrX	stalkie_big_nohaplotig	exon	68390322	68390670	100	+	.	Parent=FBgn0259749.1.mrna1;Target=FBgn0259749.1 1 349 +
ChrX	stalkie_big_nohaplotig	exon	68405403	68406514	100	+	.	Parent=FBgn0259749.1.mrna1;Target=FBgn0259749.1 350 1461 +
ChrX	stalkie_big_nohaplotig	CDS	68390322	68390670	.	+	0	Parent=FBgn0259749.1.mrna1;Target=FBgn0259749.1 1 349 +
ChrX	stalkie_big_nohaplotig	CDS	68405403	68406514	.	+	2	Parent=FBgn0259749.1.mrna1;Target=FBgn0259749.1 350 1461 +
ChrX	gffcl	locus	68418565	68422452	.	+	.	ID=RLOC_00003904;geneIDs=FBgn0032812.1.path1;transcripts=FBgn0032812.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68418565	68422452	.	+	.	ID=FBgn0032812.1.mrna1;geneID=FBgn0032812.1.path1;Name=FBgn0032812.1;Dir=sensecoverage=100.0;identity=99.9;matches=1507;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003904
ChrX	stalkie_big_nohaplotig	exon	68418565	68418704	100	+	.	Parent=FBgn0032812.1.mrna1;Target=FBgn0032812.1 1 140 +
ChrX	stalkie_big_nohaplotig	exon	68418764	68419089	100	+	.	Parent=FBgn0032812.1.mrna1;Target=FBgn0032812.1 141 466 +
ChrX	stalkie_big_nohaplotig	exon	68419149	68419516	99	+	.	Parent=FBgn0032812.1.mrna1;Target=FBgn0032812.1 467 834 +
ChrX	stalkie_big_nohaplotig	exon	68421702	68421839	100	+	.	Parent=FBgn0032812.1.mrna1;Target=FBgn0032812.1 835 972 +
ChrX	stalkie_big_nohaplotig	exon	68421916	68422452	99	+	.	Parent=FBgn0032812.1.mrna1;Target=FBgn0032812.1 973 1509 +
ChrX	stalkie_big_nohaplotig	CDS	68418565	68418704	.	+	0	Parent=FBgn0032812.1.mrna1;Target=FBgn0032812.1 1 140 +
ChrX	stalkie_big_nohaplotig	CDS	68418764	68419089	.	+	1	Parent=FBgn0032812.1.mrna1;Target=FBgn0032812.1 141 466 +
ChrX	stalkie_big_nohaplotig	CDS	68419149	68419516	.	+	2	Parent=FBgn0032812.1.mrna1;Target=FBgn0032812.1 467 834 +
ChrX	stalkie_big_nohaplotig	CDS	68421702	68421839	.	+	0	Parent=FBgn0032812.1.mrna1;Target=FBgn0032812.1 835 972 +
ChrX	stalkie_big_nohaplotig	CDS	68421916	68422452	.	+	0	Parent=FBgn0032812.1.mrna1;Target=FBgn0032812.1 973 1509 +
ChrX	gffcl	locus	68423399	68425190	.	-	.	ID=RLOC_00003905;geneIDs=comp161901_c0_seq1.path1;transcripts=comp161901_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68423399	68425190	.	-	.	ID=comp161901_c0_seq1.mrna1;geneID=comp161901_c0_seq1.path1;Name=comp161901_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=1781;mismatches=11;indels=17;unknowns=0;Target=comp161901_c0_seq1 1809 1 .;CDS_Target=comp161901_c0_seq1 1515 1402 .;locus=RLOC_00003905
ChrX	stalkie_big_nohaplotig	exon	68423399	68425190	98	-	.	Parent=comp161901_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68423691	68423804	.	-	0	Parent=comp161901_c0_seq1.mrna1
ChrX	gffcl	locus	68425746	68426505	.	-	.	ID=RLOC_00003906;geneIDs=comp150129_c0_seq1.path1;transcripts=comp150129_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68425746	68426505	.	-	.	ID=comp150129_c0_seq1.mrna1;geneID=comp150129_c0_seq1.path1;Name=comp150129_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=749;mismatches=11;indels=2;unknowns=0;Target=comp150129_c0_seq1 762 1 .;CDS_Target=comp150129_c0_seq1 239 99 .;locus=RLOC_00003906
ChrX	stalkie_big_nohaplotig	exon	68425746	68426505	98	-	.	Parent=comp150129_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68426267	68426407	.	-	0	Parent=comp150129_c0_seq1.mrna1
ChrX	gffcl	locus	68426530	68427062	.	+	.	ID=RLOC_00003907;geneIDs=comp150539_c0_seq1.path1;transcripts=comp150539_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68426530	68427062	.	+	.	ID=comp150539_c0_seq1.mrna1;geneID=comp150539_c0_seq1.path1;Name=comp150539_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.4;matches=519;mismatches=14;indels=0;unknowns=0;Target=comp150539_c0_seq1 533 1 .;CDS_Target=comp150539_c0_seq1 143 3 .;locus=RLOC_00003907
ChrX	stalkie_big_nohaplotig	exon	68426530	68427062	97	+	.	Parent=comp150539_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68426532	68426672	.	+	0	Parent=comp150539_c0_seq1.mrna1
ChrX	gffcl	locus	68427104	68428015	.	-	.	ID=RLOC_00003908;geneIDs=comp153818_c0_seq1.path1;transcripts=comp153818_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68427104	68428015	.	-	.	ID=comp153818_c0_seq1.mrna1;geneID=comp153818_c0_seq1.path1;Name=comp153818_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=903;mismatches=9;indels=9;unknowns=0;Target=comp153818_c0_seq1 921 1 .;CDS_Target=comp153818_c0_seq1 808 734 .;locus=RLOC_00003908
ChrX	stalkie_big_nohaplotig	exon	68427104	68428015	98	-	.	Parent=comp153818_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68427217	68427290	.	-	0	Parent=comp153818_c0_seq1.mrna1
ChrX	gffcl	locus	68428647	68434925	.	-	.	ID=RLOC_00003909;geneIDs=FBgn0031818.1.path1;transcripts=FBgn0031818.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68428647	68434925	.	-	.	ID=FBgn0031818.1.mrna1;geneID=FBgn0031818.1.path1;Name=FBgn0031818.1;Dir=sensecoverage=100.0;identity=100.0;matches=1389;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003909
ChrX	stalkie_big_nohaplotig	exon	68428647	68429115	100	-	.	Parent=FBgn0031818.1.mrna1;Target=FBgn0031818.1 921 1389 +
ChrX	stalkie_big_nohaplotig	exon	68433940	68434296	100	-	.	Parent=FBgn0031818.1.mrna1;Target=FBgn0031818.1 564 920 +
ChrX	stalkie_big_nohaplotig	exon	68434363	68434925	100	-	.	Parent=FBgn0031818.1.mrna1;Target=FBgn0031818.1 1 563 +
ChrX	stalkie_big_nohaplotig	CDS	68428647	68429115	.	-	1	Parent=FBgn0031818.1.mrna1;Target=FBgn0031818.1 921 1389 +
ChrX	stalkie_big_nohaplotig	CDS	68433940	68434296	.	-	1	Parent=FBgn0031818.1.mrna1;Target=FBgn0031818.1 564 920 +
ChrX	stalkie_big_nohaplotig	CDS	68434363	68434925	.	-	0	Parent=FBgn0031818.1.mrna1;Target=FBgn0031818.1 1 563 +
ChrX	gffcl	locus	68439364	68442697	.	-	.	ID=RLOC_00003910;geneIDs=FBgn0086357.1.path1;transcripts=FBgn0086357.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68439364	68442697	.	-	.	ID=FBgn0086357.1.mrna1;geneID=FBgn0086357.1.path1;Name=FBgn0086357.1;Dir=sensecoverage=100.0;identity=99.9;matches=1433;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003910
ChrX	stalkie_big_nohaplotig	exon	68439364	68439624	100	-	.	Parent=FBgn0086357.1.mrna1;Target=FBgn0086357.1 1174 1434 +
ChrX	stalkie_big_nohaplotig	exon	68439691	68440782	99	-	.	Parent=FBgn0086357.1.mrna1;Target=FBgn0086357.1 82 1173 +
ChrX	stalkie_big_nohaplotig	exon	68442334	68442401	100	-	.	Parent=FBgn0086357.1.mrna1;Target=FBgn0086357.1 14 81 +
ChrX	stalkie_big_nohaplotig	exon	68442685	68442697	100	-	.	Parent=FBgn0086357.1.mrna1;Target=FBgn0086357.1 1 13 +
ChrX	stalkie_big_nohaplotig	CDS	68439364	68439624	.	-	0	Parent=FBgn0086357.1.mrna1;Target=FBgn0086357.1 1174 1434 +
ChrX	stalkie_big_nohaplotig	CDS	68439691	68440782	.	-	0	Parent=FBgn0086357.1.mrna1;Target=FBgn0086357.1 82 1173 +
ChrX	stalkie_big_nohaplotig	CDS	68442334	68442401	.	-	2	Parent=FBgn0086357.1.mrna1;Target=FBgn0086357.1 14 81 +
ChrX	stalkie_big_nohaplotig	CDS	68442685	68442697	.	-	0	Parent=FBgn0086357.1.mrna1;Target=FBgn0086357.1 1 13 +
ChrX	gffcl	locus	68440759	68448914	.	+	.	ID=RLOC_00003911;geneIDs=comp155738_c1_seq1.path1;transcripts=comp155738_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68440759	68448914	.	+	.	ID=comp155738_c1_seq1.mrna1;geneID=comp155738_c1_seq1.path1;Name=comp155738_c1_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=1685;mismatches=3;indels=2;unknowns=0;locus=RLOC_00003911
ChrX	stalkie_big_nohaplotig	exon	68440759	68440782	100	+	.	Parent=comp155738_c1_seq1.mrna1;Target=comp155738_c1_seq1 1667 1690 -
ChrX	stalkie_big_nohaplotig	exon	68440858	68441181	100	+	.	Parent=comp155738_c1_seq1.mrna1;Target=comp155738_c1_seq1 1343 1666 -
ChrX	stalkie_big_nohaplotig	exon	68444670	68444785	100	+	.	Parent=comp155738_c1_seq1.mrna1;Target=comp155738_c1_seq1 1227 1342 -
ChrX	stalkie_big_nohaplotig	exon	68444947	68445068	99	+	.	Parent=comp155738_c1_seq1.mrna1;Target=comp155738_c1_seq1 1105 1226 -
ChrX	stalkie_big_nohaplotig	exon	68445490	68445744	99	+	.	Parent=comp155738_c1_seq1.mrna1;Target=comp155738_c1_seq1 850 1104 -
ChrX	stalkie_big_nohaplotig	exon	68445813	68446029	100	+	.	Parent=comp155738_c1_seq1.mrna1;Target=comp155738_c1_seq1 633 849 -
ChrX	stalkie_big_nohaplotig	exon	68448285	68448914	99	+	.	Parent=comp155738_c1_seq1.mrna1;Target=comp155738_c1_seq1 1 632 -
ChrX	stalkie_big_nohaplotig	CDS	68444971	68445068	.	+	0	Parent=comp155738_c1_seq1.mrna1;Target=comp155738_c1_seq1 1105 1202 .
ChrX	stalkie_big_nohaplotig	CDS	68445490	68445744	.	+	1	Parent=comp155738_c1_seq1.mrna1;Target=comp155738_c1_seq1 850 1104 .
ChrX	stalkie_big_nohaplotig	CDS	68445813	68446029	.	+	1	Parent=comp155738_c1_seq1.mrna1;Target=comp155738_c1_seq1 633 849 .
ChrX	stalkie_big_nohaplotig	CDS	68448285	68448287	.	+	0	Parent=comp155738_c1_seq1.mrna1;Target=comp155738_c1_seq1 630 632 .
ChrX	gffcl	locus	68471995	68472226	.	+	.	ID=RLOC_00003912;geneIDs=comp145884_c1_seq1.path1;transcripts=comp145884_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68471995	68472226	.	+	.	ID=comp145884_c1_seq1.mrna1;geneID=comp145884_c1_seq1.path1;Name=comp145884_c1_seq1;Dir=indeterminatecoverage=99.6;identity=96.6;matches=224;mismatches=8;indels=0;unknowns=0;Target=comp145884_c1_seq1 232 1 .;CDS_Target=comp145884_c1_seq1 163 2 .;locus=RLOC_00003912
ChrX	stalkie_big_nohaplotig	exon	68471995	68472226	96	+	.	Parent=comp145884_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68471996	68472157	.	+	0	Parent=comp145884_c1_seq1.mrna1
ChrX	gffcl	locus	68538874	68539734	.	-	.	ID=RLOC_00003913;geneIDs=FBgn0028515.1.path1;transcripts=FBgn0028515.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68538874	68539734	.	-	.	ID=FBgn0028515.1.mrna1;geneID=FBgn0028515.1.path1;Name=FBgn0028515.1;Dir=sensecoverage=100.0;identity=99.8;matches=799;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003913
ChrX	stalkie_big_nohaplotig	exon	68538874	68539371	99	-	.	Parent=FBgn0028515.1.mrna1;Target=FBgn0028515.1 304 801 +
ChrX	stalkie_big_nohaplotig	exon	68539432	68539734	100	-	.	Parent=FBgn0028515.1.mrna1;Target=FBgn0028515.1 1 303 +
ChrX	stalkie_big_nohaplotig	CDS	68538874	68539371	.	-	0	Parent=FBgn0028515.1.mrna1;Target=FBgn0028515.1 304 801 +
ChrX	stalkie_big_nohaplotig	CDS	68539432	68539734	.	-	0	Parent=FBgn0028515.1.mrna1;Target=FBgn0028515.1 1 303 +
ChrX	gffcl	locus	68546699	68546976	.	+	.	ID=RLOC_00003914;geneIDs=comp143017_c0_seq1.path1;transcripts=comp143017_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68546699	68546976	.	+	.	ID=comp143017_c0_seq1.mrna1;geneID=comp143017_c0_seq1.path1;Name=comp143017_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=278;mismatches=0;indels=0;unknowns=0;Target=comp143017_c0_seq1 278 1 .;CDS_Target=comp143017_c0_seq1 274 206 .;locus=RLOC_00003914
ChrX	stalkie_big_nohaplotig	exon	68546699	68546976	100	+	.	Parent=comp143017_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68546904	68546972	.	+	0	Parent=comp143017_c0_seq1.mrna1
ChrX	gffcl	locus	68549246	68560139	.	+	.	ID=RLOC_00003915;geneIDs=FBgn0032938.1.path1;transcripts=FBgn0032938.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68549246	68560139	.	+	.	ID=FBgn0032938.1.mrna1;geneID=FBgn0032938.1.path1;Name=FBgn0032938.1;Dir=sensecoverage=100.0;identity=99.8;matches=2301;mismatches=5;indels=0;unknowns=0;locus=RLOC_00003915
ChrX	stalkie_big_nohaplotig	exon	68549246	68549487	100	+	.	Parent=FBgn0032938.1.mrna1;Target=FBgn0032938.1 1 242 +
ChrX	stalkie_big_nohaplotig	exon	68549562	68549873	100	+	.	Parent=FBgn0032938.1.mrna1;Target=FBgn0032938.1 243 554 +
ChrX	stalkie_big_nohaplotig	exon	68549928	68550154	98	+	.	Parent=FBgn0032938.1.mrna1;Target=FBgn0032938.1 555 781 +
ChrX	stalkie_big_nohaplotig	exon	68551912	68552291	100	+	.	Parent=FBgn0032938.1.mrna1;Target=FBgn0032938.1 782 1161 +
ChrX	stalkie_big_nohaplotig	exon	68552450	68552532	100	+	.	Parent=FBgn0032938.1.mrna1;Target=FBgn0032938.1 1162 1244 +
ChrX	stalkie_big_nohaplotig	exon	68559078	68560139	99	+	.	Parent=FBgn0032938.1.mrna1;Target=FBgn0032938.1 1245 2306 +
ChrX	stalkie_big_nohaplotig	CDS	68549246	68549487	.	+	0	Parent=FBgn0032938.1.mrna1;Target=FBgn0032938.1 1 242 +
ChrX	stalkie_big_nohaplotig	CDS	68549562	68549873	.	+	1	Parent=FBgn0032938.1.mrna1;Target=FBgn0032938.1 243 554 +
ChrX	stalkie_big_nohaplotig	CDS	68549928	68550154	.	+	1	Parent=FBgn0032938.1.mrna1;Target=FBgn0032938.1 555 781 +
ChrX	stalkie_big_nohaplotig	CDS	68551912	68552291	.	+	2	Parent=FBgn0032938.1.mrna1;Target=FBgn0032938.1 782 1161 +
ChrX	stalkie_big_nohaplotig	CDS	68552450	68552532	.	+	0	Parent=FBgn0032938.1.mrna1;Target=FBgn0032938.1 1162 1244 +
ChrX	stalkie_big_nohaplotig	CDS	68559078	68560137	.	+	1	Parent=FBgn0032938.1.mrna1;Target=FBgn0032938.1 1245 2304 +
ChrX	gffcl	locus	68568096	68655690	.	.	.	ID=RLOC_00003916;geneIDs=CPIJ003908.1.path1,comp116693_c0_seq1.path1;transcripts=CPIJ003908.1.mrna1,comp116693_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68568096	68655690	.	+	.	ID=CPIJ003908.1.mrna1;geneID=CPIJ003908.1.path1;Name=CPIJ003908.1;Dir=indeterminatecoverage=96.7;identity=99.8;matches=2319;mismatches=4;indels=0;unknowns=0;Target=CPIJ003908.1 2433 211 .;locus=RLOC_00003916
ChrX	stalkie_big_nohaplotig	exon	68568096	68568103	100	+	.	Parent=CPIJ003908.1.mrna1;Target=CPIJ003908.1 52 45 .
ChrX	stalkie_big_nohaplotig	exon	68575250	68575254	100	+	.	Parent=CPIJ003908.1.mrna1;Target=CPIJ003908.1 57 53 .
ChrX	stalkie_big_nohaplotig	exon	68653382	68655690	99	+	.	Parent=CPIJ003908.1.mrna1;Target=CPIJ003908.1 2435 127 .
ChrX	stalkie_big_nohaplotig	CDS	68653466	68655688	.	+	0	Parent=CPIJ003908.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68574951	68575448	.	-	.	ID=comp116693_c0_seq1.mrna1;geneID=comp116693_c0_seq1.path1;Name=comp116693_c0_seq1;Dir=indeterminatecoverage=96.9;identity=99.8;matches=497;mismatches=1;indels=0;unknowns=0;Target=comp116693_c0_seq1 498 1 .;CDS_Target=comp116693_c0_seq1 171 1 .;locus=RLOC_00003916
ChrX	stalkie_big_nohaplotig	exon	68574951	68575448	99	-	.	Parent=comp116693_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68575278	68575448	.	-	0	Parent=comp116693_c0_seq1.mrna1
ChrX	gffcl	locus	68575882	68577005	.	-	.	ID=RLOC_00003917;geneIDs=comp119743_c0_seq1.path1;transcripts=comp119743_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68575882	68577005	.	-	.	ID=comp119743_c0_seq1.mrna1;geneID=comp119743_c0_seq1.path1;Name=comp119743_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1113;mismatches=5;indels=6;unknowns=0;Target=comp119743_c0_seq1 1118 1 .;CDS_Target=comp119743_c0_seq1 164 21 .;locus=RLOC_00003917
ChrX	stalkie_big_nohaplotig	exon	68575882	68577005	99	-	.	Parent=comp119743_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68576842	68576985	.	-	0	Parent=comp119743_c0_seq1.mrna1
ChrX	gffcl	locus	68580827	68584829	.	-	.	ID=RLOC_00003918;geneIDs=FBgn0031182.1.path1;transcripts=FBgn0031182.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68580827	68584829	.	-	.	ID=FBgn0031182.1.mrna1;geneID=FBgn0031182.1.path1;Name=FBgn0031182.1;Dir=sensecoverage=100.0;identity=99.9;matches=1576;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003918
ChrX	stalkie_big_nohaplotig	exon	68580827	68581117	99	-	.	Parent=FBgn0031182.1.mrna1;Target=FBgn0031182.1 1288 1578 +
ChrX	stalkie_big_nohaplotig	exon	68582904	68583695	100	-	.	Parent=FBgn0031182.1.mrna1;Target=FBgn0031182.1 496 1287 +
ChrX	stalkie_big_nohaplotig	exon	68583776	68584049	100	-	.	Parent=FBgn0031182.1.mrna1;Target=FBgn0031182.1 222 495 +
ChrX	stalkie_big_nohaplotig	exon	68584609	68584829	99	-	.	Parent=FBgn0031182.1.mrna1;Target=FBgn0031182.1 1 221 +
ChrX	stalkie_big_nohaplotig	CDS	68580827	68581117	.	-	0	Parent=FBgn0031182.1.mrna1;Target=FBgn0031182.1 1288 1578 +
ChrX	stalkie_big_nohaplotig	CDS	68582904	68583695	.	-	0	Parent=FBgn0031182.1.mrna1;Target=FBgn0031182.1 496 1287 +
ChrX	stalkie_big_nohaplotig	CDS	68583776	68584049	.	-	1	Parent=FBgn0031182.1.mrna1;Target=FBgn0031182.1 222 495 +
ChrX	stalkie_big_nohaplotig	CDS	68584609	68584829	.	-	0	Parent=FBgn0031182.1.mrna1;Target=FBgn0031182.1 1 221 +
ChrX	gffcl	locus	68588602	68590904	.	-	.	ID=RLOC_00003919;geneIDs=FBgn0002865.1.path1,FBgn0031859.1.path1;transcripts=FBgn0031859.1.mrna1,FBgn0002865.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68588602	68590904	.	-	.	ID=FBgn0031859.1.mrna1;geneID=FBgn0031859.1.path1;Name=FBgn0031859.1;Dir=sensecoverage=97.0;identity=100.0;matches=544;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003919
ChrX	stalkie_big_nohaplotig	exon	68588602	68589009	100	-	.	Parent=FBgn0031859.1.mrna1;Target=FBgn0031859.1 148 555 +
ChrX	stalkie_big_nohaplotig	exon	68590769	68590904	100	-	.	Parent=FBgn0031859.1.mrna1;Target=FBgn0031859.1 12 147 +
ChrX	stalkie_big_nohaplotig	CDS	68588602	68589009	.	-	0	Parent=FBgn0031859.1.mrna1;Target=FBgn0031859.1 148 555 +
ChrX	stalkie_big_nohaplotig	CDS	68590769	68590903	.	-	0	Parent=FBgn0031859.1.mrna1;Target=FBgn0031859.1 13 147 +
ChrX	stalkie_big_nohaplotig	mRNA	68589585	68590904	.	-	.	ID=FBgn0002865.1.mrna1;geneID=FBgn0002865.1.path1;Name=FBgn0002865.1;Dir=sensecoverage=95.7;identity=97.3;matches=844;mismatches=23;indels=0;unknowns=0;locus=RLOC_00003919
ChrX	stalkie_big_nohaplotig	exon	68589585	68590315	96	-	.	Parent=FBgn0002865.1.mrna1;Target=FBgn0002865.1 148 878 +
ChrX	stalkie_big_nohaplotig	exon	68590769	68590904	100	-	.	Parent=FBgn0002865.1.mrna1;Target=FBgn0002865.1 12 147 +
ChrX	stalkie_big_nohaplotig	CDS	68589587	68590315	.	-	0	Parent=FBgn0002865.1.mrna1;Target=FBgn0002865.1 148 876 +
ChrX	stalkie_big_nohaplotig	CDS	68590769	68590903	.	-	0	Parent=FBgn0002865.1.mrna1;Target=FBgn0002865.1 13 147 +
ChrX	gffcl	locus	68633989	68634341	.	+	.	ID=RLOC_00003920;geneIDs=comp113413_c0_seq1.path1;transcripts=comp113413_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68633989	68634341	.	+	.	ID=comp113413_c0_seq1.mrna1;geneID=comp113413_c0_seq1.path1;Name=comp113413_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=349;mismatches=0;indels=4;unknowns=0;Target=comp113413_c0_seq1 349 1 .;CDS_Target=comp113413_c0_seq1 151 47 .;locus=RLOC_00003920
ChrX	stalkie_big_nohaplotig	exon	68633989	68634341	98	+	.	Parent=comp113413_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68634039	68634143	.	+	0	Parent=comp113413_c0_seq1.mrna1
ChrX	gffcl	locus	68634796	68635349	.	-	.	ID=RLOC_00003921;geneIDs=comp143174_c0_seq1.path1;transcripts=comp143174_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68634796	68635349	.	-	.	ID=comp143174_c0_seq1.mrna1;geneID=comp143174_c0_seq1.path1;Name=comp143174_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=548;mismatches=6;indels=0;unknowns=0;Target=comp143174_c0_seq1 554 1 .;CDS_Target=comp143174_c0_seq1 203 126 .;locus=RLOC_00003921
ChrX	stalkie_big_nohaplotig	exon	68634796	68635349	98	-	.	Parent=comp143174_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68635147	68635224	.	-	0	Parent=comp143174_c0_seq1.mrna1
ChrX	gffcl	locus	68636173	68637591	.	-	.	ID=RLOC_00003922;geneIDs=comp161066_c0_seq1.path1;transcripts=comp161066_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68636173	68637591	.	-	.	ID=comp161066_c0_seq1.mrna1;geneID=comp161066_c0_seq1.path1;Name=comp161066_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.5;matches=1401;mismatches=18;indels=3;unknowns=0;Target=comp161066_c0_seq1 1425 4 .;CDS_Target=comp161066_c0_seq1 553 425 .;locus=RLOC_00003922
ChrX	stalkie_big_nohaplotig	exon	68636173	68637591	98	-	.	Parent=comp161066_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68637045	68637170	.	-	0	Parent=comp161066_c0_seq1.mrna1
ChrX	gffcl	locus	68637706	68638306	.	-	.	ID=RLOC_00003923;geneIDs=comp156017_c1_seq1.path1;transcripts=comp156017_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68637706	68638306	.	-	.	ID=comp156017_c1_seq1.mrna1;geneID=comp156017_c1_seq1.path1;Name=comp156017_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=593;mismatches=3;indels=5;unknowns=0;Target=comp156017_c1_seq1 596 1 .;CDS_Target=comp156017_c1_seq1 395 327 .;locus=RLOC_00003923
ChrX	stalkie_big_nohaplotig	exon	68637706	68638306	98	-	.	Parent=comp156017_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68637912	68637980	.	-	0	Parent=comp156017_c1_seq1.mrna1
ChrX	gffcl	locus	68640201	68665838	.	-	.	ID=RLOC_00003924;geneIDs=FBgn0031836.1.path1;transcripts=FBgn0031836.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68640201	68665838	.	-	.	ID=FBgn0031836.1.mrna1;geneID=FBgn0031836.1.path1;Name=FBgn0031836.1;Dir=sensecoverage=100.0;identity=99.4;matches=1380;mismatches=3;indels=6;unknowns=0;locus=RLOC_00003924
ChrX	stalkie_big_nohaplotig	exon	68640201	68640536	99	-	.	Parent=FBgn0031836.1.mrna1;Target=FBgn0031836.1 1048 1383 +
ChrX	stalkie_big_nohaplotig	exon	68643611	68643904	100	-	.	Parent=FBgn0031836.1.mrna1;Target=FBgn0031836.1 754 1047 +
ChrX	stalkie_big_nohaplotig	exon	68665080	68665838	98	-	.	Parent=FBgn0031836.1.mrna1;Target=FBgn0031836.1 1 753 +
ChrX	stalkie_big_nohaplotig	CDS	68640201	68640536	.	-	0	Parent=FBgn0031836.1.mrna1;Target=FBgn0031836.1 1048 1383 +
ChrX	stalkie_big_nohaplotig	CDS	68643611	68643904	.	-	0	Parent=FBgn0031836.1.mrna1;Target=FBgn0031836.1 754 1047 +
ChrX	stalkie_big_nohaplotig	CDS	68665080	68665838	.	-	0	Parent=FBgn0031836.1.mrna1;Target=FBgn0031836.1 1 753 +
ChrX	gffcl	locus	68672236	68673290	.	+	.	ID=RLOC_00003925;geneIDs=FBgn0028515.2.path1;transcripts=FBgn0028515.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68672236	68673290	.	+	.	ID=FBgn0028515.2.mrna1;geneID=FBgn0028515.2.path1;Name=FBgn0028515.2;Dir=sensecoverage=100.0;identity=100.0;matches=996;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003925
ChrX	stalkie_big_nohaplotig	exon	68672236	68672760	100	+	.	Parent=FBgn0028515.2.mrna1;Target=FBgn0028515.2 1 525 +
ChrX	stalkie_big_nohaplotig	exon	68672820	68673290	100	+	.	Parent=FBgn0028515.2.mrna1;Target=FBgn0028515.2 526 996 +
ChrX	stalkie_big_nohaplotig	CDS	68672236	68672760	.	+	0	Parent=FBgn0028515.2.mrna1;Target=FBgn0028515.2 1 525 +
ChrX	stalkie_big_nohaplotig	CDS	68672820	68673290	.	+	0	Parent=FBgn0028515.2.mrna1;Target=FBgn0028515.2 526 996 +
ChrX	gffcl	locus	68675681	68676669	.	-	.	ID=RLOC_00003926;geneIDs=FBgn0039128.1.path1;transcripts=FBgn0039128.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68675681	68676669	.	-	.	ID=FBgn0039128.1.mrna1;geneID=FBgn0039128.1.path1;Name=FBgn0039128.1;Dir=sensecoverage=100.0;identity=99.3;matches=876;mismatches=3;indels=3;unknowns=0;locus=RLOC_00003926
ChrX	stalkie_big_nohaplotig	exon	68675681	68676080	98	-	.	Parent=FBgn0039128.1.mrna1;Target=FBgn0039128.1 480 882 +
ChrX	stalkie_big_nohaplotig	exon	68676135	68676310	100	-	.	Parent=FBgn0039128.1.mrna1;Target=FBgn0039128.1 304 479 +
ChrX	stalkie_big_nohaplotig	exon	68676367	68676669	100	-	.	Parent=FBgn0039128.1.mrna1;Target=FBgn0039128.1 1 303 +
ChrX	stalkie_big_nohaplotig	CDS	68675681	68676080	.	-	1	Parent=FBgn0039128.1.mrna1;Target=FBgn0039128.1 480 882 +
ChrX	stalkie_big_nohaplotig	CDS	68676135	68676310	.	-	0	Parent=FBgn0039128.1.mrna1;Target=FBgn0039128.1 304 479 +
ChrX	stalkie_big_nohaplotig	CDS	68676367	68676669	.	-	0	Parent=FBgn0039128.1.mrna1;Target=FBgn0039128.1 1 303 +
ChrX	gffcl	locus	68682425	68686659	.	+	.	ID=RLOC_00003927;geneIDs=FBgn0041627.1.path1;transcripts=FBgn0041627.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68682425	68686659	.	+	.	ID=FBgn0041627.1.mrna1;geneID=FBgn0041627.1.path1;Name=FBgn0041627.1;Dir=sensecoverage=100.0;identity=100.0;matches=2127;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003927
ChrX	stalkie_big_nohaplotig	exon	68682425	68682457	100	+	.	Parent=FBgn0041627.1.mrna1;Target=FBgn0041627.1 1 33 +
ChrX	stalkie_big_nohaplotig	exon	68682513	68682608	100	+	.	Parent=FBgn0041627.1.mrna1;Target=FBgn0041627.1 34 129 +
ChrX	stalkie_big_nohaplotig	exon	68682669	68682907	100	+	.	Parent=FBgn0041627.1.mrna1;Target=FBgn0041627.1 130 368 +
ChrX	stalkie_big_nohaplotig	exon	68682966	68683088	100	+	.	Parent=FBgn0041627.1.mrna1;Target=FBgn0041627.1 369 491 +
ChrX	stalkie_big_nohaplotig	exon	68684967	68685651	100	+	.	Parent=FBgn0041627.1.mrna1;Target=FBgn0041627.1 492 1176 +
ChrX	stalkie_big_nohaplotig	exon	68685709	68686659	100	+	.	Parent=FBgn0041627.1.mrna1;Target=FBgn0041627.1 1177 2127 +
ChrX	stalkie_big_nohaplotig	CDS	68682425	68682457	.	+	0	Parent=FBgn0041627.1.mrna1;Target=FBgn0041627.1 1 33 +
ChrX	stalkie_big_nohaplotig	CDS	68682513	68682608	.	+	0	Parent=FBgn0041627.1.mrna1;Target=FBgn0041627.1 34 129 +
ChrX	stalkie_big_nohaplotig	CDS	68682669	68682907	.	+	0	Parent=FBgn0041627.1.mrna1;Target=FBgn0041627.1 130 368 +
ChrX	stalkie_big_nohaplotig	CDS	68682966	68683088	.	+	1	Parent=FBgn0041627.1.mrna1;Target=FBgn0041627.1 369 491 +
ChrX	stalkie_big_nohaplotig	CDS	68684967	68685651	.	+	1	Parent=FBgn0041627.1.mrna1;Target=FBgn0041627.1 492 1176 +
ChrX	stalkie_big_nohaplotig	CDS	68685709	68686659	.	+	0	Parent=FBgn0041627.1.mrna1;Target=FBgn0041627.1 1177 2127 +
ChrX	gffcl	locus	68690591	68691420	.	-	.	ID=RLOC_00003928;geneIDs=FBgn0038545.1.path1;transcripts=FBgn0038545.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68690591	68691420	.	-	.	ID=FBgn0038545.1.mrna1;geneID=FBgn0038545.1.path1;Name=FBgn0038545.1;Dir=sensecoverage=99.0;identity=100.0;matches=511;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003928
ChrX	stalkie_big_nohaplotig	exon	68690591	68690671	100	-	.	Parent=FBgn0038545.1.mrna1;Target=FBgn0038545.1 436 516 +
ChrX	stalkie_big_nohaplotig	exon	68690736	68690786	100	-	.	Parent=FBgn0038545.1.mrna1;Target=FBgn0038545.1 385 435 +
ChrX	stalkie_big_nohaplotig	exon	68690860	68690959	100	-	.	Parent=FBgn0038545.1.mrna1;Target=FBgn0038545.1 285 384 +
ChrX	stalkie_big_nohaplotig	exon	68691023	68691183	100	-	.	Parent=FBgn0038545.1.mrna1;Target=FBgn0038545.1 124 284 +
ChrX	stalkie_big_nohaplotig	exon	68691303	68691420	100	-	.	Parent=FBgn0038545.1.mrna1;Target=FBgn0038545.1 6 123 +
ChrX	stalkie_big_nohaplotig	CDS	68690591	68690671	.	-	0	Parent=FBgn0038545.1.mrna1;Target=FBgn0038545.1 436 516 +
ChrX	stalkie_big_nohaplotig	CDS	68690736	68690786	.	-	0	Parent=FBgn0038545.1.mrna1;Target=FBgn0038545.1 385 435 +
ChrX	stalkie_big_nohaplotig	CDS	68690860	68690959	.	-	1	Parent=FBgn0038545.1.mrna1;Target=FBgn0038545.1 285 384 +
ChrX	stalkie_big_nohaplotig	CDS	68691023	68691183	.	-	0	Parent=FBgn0038545.1.mrna1;Target=FBgn0038545.1 124 284 +
ChrX	stalkie_big_nohaplotig	CDS	68691303	68691419	.	-	0	Parent=FBgn0038545.1.mrna1;Target=FBgn0038545.1 7 123 +
ChrX	gffcl	locus	68692020	68693546	.	+	.	ID=RLOC_00003929;geneIDs=comp155095_c0_seq1.path1;transcripts=comp155095_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68692020	68693546	.	+	.	ID=comp155095_c0_seq1.mrna1;geneID=comp155095_c0_seq1.path1;Name=comp155095_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=743;mismatches=3;indels=1;unknowns=0;locus=RLOC_00003929
ChrX	stalkie_big_nohaplotig	exon	68692020	68692143	96	+	.	Parent=comp155095_c0_seq1.mrna1;Target=comp155095_c0_seq1 623 747 -
ChrX	stalkie_big_nohaplotig	exon	68692925	68693546	100	+	.	Parent=comp155095_c0_seq1.mrna1;Target=comp155095_c0_seq1 1 622 -
ChrX	stalkie_big_nohaplotig	CDS	68692135	68692143	.	+	0	Parent=comp155095_c0_seq1.mrna1;Target=comp155095_c0_seq1 623 631 .
ChrX	stalkie_big_nohaplotig	CDS	68692925	68693545	.	+	0	Parent=comp155095_c0_seq1.mrna1;Target=comp155095_c0_seq1 2 622 .
ChrX	gffcl	locus	68704371	68706202	.	+	.	ID=RLOC_00003930;geneIDs=comp149468_c0_seq1.path1,comp174229_c0_seq1.path1;transcripts=comp174229_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68704371	68705339	.	+	.	ID=comp174229_c0_seq1.mrna1;geneID=comp174229_c0_seq1.path1;Name=comp174229_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=827;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003930
ChrX	stalkie_big_nohaplotig	exon	68704371	68704545	100	+	.	Parent=comp174229_c0_seq1.mrna1;Target=comp174229_c0_seq1 1 175 +
ChrX	stalkie_big_nohaplotig	exon	68704630	68704700	100	+	.	Parent=comp174229_c0_seq1.mrna1;Target=comp174229_c0_seq1 176 246 +
ChrX	stalkie_big_nohaplotig	exon	68704759	68705339	100	+	.	Parent=comp174229_c0_seq1.mrna1;Target=comp174229_c0_seq1 247 827 +
ChrX	stalkie_big_nohaplotig	CDS	68704489	68704545	.	+	0	Parent=comp174229_c0_seq1.mrna1;Target=comp174229_c0_seq1 119 175 +
ChrX	stalkie_big_nohaplotig	CDS	68704630	68704700	.	+	0	Parent=comp174229_c0_seq1.mrna1;Target=comp174229_c0_seq1 176 246 +
ChrX	stalkie_big_nohaplotig	CDS	68704759	68704963	.	+	1	Parent=comp174229_c0_seq1.mrna1;Target=comp174229_c0_seq1 247 451 +
ChrX	gffcl	locus	68706250	68708623	.	-	.	ID=RLOC_00003931;geneIDs=FBgn0028515.3.path1,comp153246_c0_seq1.path1;transcripts=comp153246_c0_seq1.mrna1,FBgn0028515.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68706250	68708623	.	-	.	ID=comp153246_c0_seq1.mrna1;geneID=comp153246_c0_seq1.path1;Name=comp153246_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=2260;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003931
ChrX	stalkie_big_nohaplotig	exon	68706250	68707478	99	-	.	Parent=comp153246_c0_seq1.mrna1;Target=comp153246_c0_seq1 1 1229 -
ChrX	stalkie_big_nohaplotig	exon	68707537	68708159	100	-	.	Parent=comp153246_c0_seq1.mrna1;Target=comp153246_c0_seq1 1230 1852 -
ChrX	stalkie_big_nohaplotig	exon	68708213	68708623	99	-	.	Parent=comp153246_c0_seq1.mrna1;Target=comp153246_c0_seq1 1853 2263 -
ChrX	stalkie_big_nohaplotig	CDS	68706981	68707478	.	-	0	Parent=comp153246_c0_seq1.mrna1;Target=comp153246_c0_seq1 732 1229 .
ChrX	stalkie_big_nohaplotig	CDS	68707537	68708106	.	-	0	Parent=comp153246_c0_seq1.mrna1;Target=comp153246_c0_seq1 1230 1799 .
ChrX	stalkie_big_nohaplotig	mRNA	68706984	68708307	.	-	.	ID=FBgn0028515.3.mrna1;geneID=FBgn0028515.3.path1;Name=FBgn0028515.3;Dir=sensecoverage=100.0;identity=100.0;matches=1203;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003931
ChrX	stalkie_big_nohaplotig	exon	68706984	68707478	100	-	.	Parent=FBgn0028515.3.mrna1;Target=FBgn0028515.3 709 1203 +
ChrX	stalkie_big_nohaplotig	exon	68707537	68708172	100	-	.	Parent=FBgn0028515.3.mrna1;Target=FBgn0028515.3 73 708 +
ChrX	stalkie_big_nohaplotig	exon	68708236	68708307	100	-	.	Parent=FBgn0028515.3.mrna1;Target=FBgn0028515.3 1 72 +
ChrX	stalkie_big_nohaplotig	CDS	68706984	68707478	.	-	0	Parent=FBgn0028515.3.mrna1;Target=FBgn0028515.3 709 1203 +
ChrX	stalkie_big_nohaplotig	CDS	68707537	68708172	.	-	0	Parent=FBgn0028515.3.mrna1;Target=FBgn0028515.3 73 708 +
ChrX	stalkie_big_nohaplotig	CDS	68708236	68708307	.	-	0	Parent=FBgn0028515.3.mrna1;Target=FBgn0028515.3 1 72 +
ChrX	gffcl	locus	68740323	68741369	.	-	.	ID=RLOC_00003932;geneIDs=ORF1824.path1;transcripts=ORF1824.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68740323	68741369	.	-	.	ID=ORF1824.mrna1;geneID=ORF1824.path1;Name=ORF1824;Dir=sensecoverage=100.0;identity=99.6;matches=983;mismatches=4;indels=0;unknowns=0;locus=RLOC_00003932
ChrX	stalkie_big_nohaplotig	exon	68740323	68741024	99	-	.	Parent=ORF1824.mrna1;Target=ORF1824 286 987 +
ChrX	stalkie_big_nohaplotig	exon	68741085	68741369	99	-	.	Parent=ORF1824.mrna1;Target=ORF1824 1 285 +
ChrX	stalkie_big_nohaplotig	CDS	68740323	68741024	.	-	0	Parent=ORF1824.mrna1;Target=ORF1824 286 987 +
ChrX	stalkie_big_nohaplotig	CDS	68741085	68741369	.	-	0	Parent=ORF1824.mrna1;Target=ORF1824 1 285 +
ChrX	gffcl	locus	68748290	68750096	.	-	.	ID=RLOC_00003933;geneIDs=comp159337_c0_seq1.path1;transcripts=comp159337_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68748290	68750096	.	-	.	ID=comp159337_c0_seq1.mrna1;geneID=comp159337_c0_seq1.path1;Name=comp159337_c0_seq1;Dir=indeterminatecoverage=98.7;identity=97.7;matches=1766;mismatches=39;indels=2;unknowns=0;Target=comp159337_c0_seq1 1815 11 .;CDS_Target=comp159337_c0_seq1 941 723 .;locus=RLOC_00003933
ChrX	stalkie_big_nohaplotig	exon	68748290	68750096	97	-	.	Parent=comp159337_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68749164	68749382	.	-	0	Parent=comp159337_c0_seq1.mrna1
ChrX	gffcl	locus	68911785	68913323	.	-	.	ID=RLOC_00003934;geneIDs=FBgn0004858.1.path1;transcripts=FBgn0004858.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68911785	68913323	.	-	.	ID=FBgn0004858.1.mrna1;geneID=FBgn0004858.1.path1;Name=FBgn0004858.1;Dir=indeterminatecoverage=92.4;identity=99.9;matches=1538;mismatches=1;indels=0;unknowns=0;Target=FBgn0004858.1 1665 127 .;locus=RLOC_00003934
ChrX	stalkie_big_nohaplotig	exon	68911785	68913323	99	-	.	Parent=FBgn0004858.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68911785	68913323	.	-	0	Parent=FBgn0004858.1.mrna1
ChrX	gffcl	locus	68984637	68985314	.	-	.	ID=RLOC_00003935;geneIDs=comp138211_c0_seq1.path1;transcripts=comp138211_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68984637	68985314	.	-	.	ID=comp138211_c0_seq1.mrna1;geneID=comp138211_c0_seq1.path1;Name=comp138211_c0_seq1;Dir=indeterminatecoverage=96.0;identity=100.0;matches=678;mismatches=0;indels=0;unknowns=0;Target=comp138211_c0_seq1 706 29 .;CDS_Target=comp138211_c0_seq1 170 30 .;locus=RLOC_00003935
ChrX	stalkie_big_nohaplotig	exon	68984637	68985314	100	-	.	Parent=comp138211_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68985173	68985313	.	-	0	Parent=comp138211_c0_seq1.mrna1
ChrX	gffcl	locus	68988112	68988478	.	-	.	ID=RLOC_00003936;geneIDs=comp143921_c0_seq1.path1;transcripts=comp143921_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	68988112	68988478	.	-	.	ID=comp143921_c0_seq1.mrna1;geneID=comp143921_c0_seq1.path1;Name=comp143921_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=360;mismatches=7;indels=0;unknowns=0;Target=comp143921_c0_seq1 367 1 .;CDS_Target=comp143921_c0_seq1 108 52 .;locus=RLOC_00003936
ChrX	stalkie_big_nohaplotig	exon	68988112	68988478	98	-	.	Parent=comp143921_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	68988371	68988427	.	-	0	Parent=comp143921_c0_seq1.mrna1
ChrX	gffcl	locus	69013877	69014433	.	-	.	ID=RLOC_00003937;geneIDs=FBgn0032546.1.path1;transcripts=FBgn0032546.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69013877	69014433	.	-	.	ID=FBgn0032546.1.mrna1;geneID=FBgn0032546.1.path1;Name=FBgn0032546.1;Dir=sensecoverage=100.0;identity=100.0;matches=495;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003937
ChrX	stalkie_big_nohaplotig	exon	69013877	69014044	100	-	.	Parent=FBgn0032546.1.mrna1;Target=FBgn0032546.1 328 495 +
ChrX	stalkie_big_nohaplotig	exon	69014107	69014433	100	-	.	Parent=FBgn0032546.1.mrna1;Target=FBgn0032546.1 1 327 +
ChrX	stalkie_big_nohaplotig	CDS	69013877	69014044	.	-	0	Parent=FBgn0032546.1.mrna1;Target=FBgn0032546.1 328 495 +
ChrX	stalkie_big_nohaplotig	CDS	69014107	69014433	.	-	0	Parent=FBgn0032546.1.mrna1;Target=FBgn0032546.1 1 327 +
ChrX	gffcl	locus	69018211	69018873	.	-	.	ID=RLOC_00003938;geneIDs=comp151207_c0_seq1.path1;transcripts=comp151207_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69018211	69018873	.	-	.	ID=comp151207_c0_seq1.mrna1;geneID=comp151207_c0_seq1.path1;Name=comp151207_c0_seq1;Dir=sensecoverage=96.3;identity=99.3;matches=594;mismatches=3;indels=1;unknowns=0;Target=comp151207_c0_seq1 86 415 +;locus=RLOC_00003938
ChrX	stalkie_big_nohaplotig	exon	69018211	69018365	100	-	.	Parent=comp151207_c0_seq1.mrna1;Target=comp151207_c0_seq1 445 599 +
ChrX	stalkie_big_nohaplotig	exon	69018432	69018873	99	-	.	Parent=comp151207_c0_seq1.mrna1;Target=comp151207_c0_seq1 2 444 +
ChrX	stalkie_big_nohaplotig	CDS	69018461	69018790	.	-	0	Parent=comp151207_c0_seq1.mrna1
ChrX	gffcl	locus	69146964	69148266	.	-	.	ID=RLOC_00003939;geneIDs=comp160215_c0_seq1.path1;transcripts=comp160215_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69146964	69148266	.	-	.	ID=comp160215_c0_seq1.mrna1;geneID=comp160215_c0_seq1.path1;Name=comp160215_c0_seq1;Dir=antisensecoverage=98.6;identity=97.9;matches=969;mismatches=21;indels=0;unknowns=0;locus=RLOC_00003939
ChrX	stalkie_big_nohaplotig	exon	69146964	69147302	99	-	.	Parent=comp160215_c0_seq1.mrna1;Target=comp160215_c0_seq1 2 340 -
ChrX	stalkie_big_nohaplotig	exon	69147359	69147595	96	-	.	Parent=comp160215_c0_seq1.mrna1;Target=comp160215_c0_seq1 341 577 -
ChrX	stalkie_big_nohaplotig	exon	69147719	69147927	99	-	.	Parent=comp160215_c0_seq1.mrna1;Target=comp160215_c0_seq1 578 786 -
ChrX	stalkie_big_nohaplotig	exon	69147984	69148052	97	-	.	Parent=comp160215_c0_seq1.mrna1;Target=comp160215_c0_seq1 787 855 -
ChrX	stalkie_big_nohaplotig	exon	69148131	69148266	95	-	.	Parent=comp160215_c0_seq1.mrna1;Target=comp160215_c0_seq1 856 991 -
ChrX	stalkie_big_nohaplotig	CDS	69147774	69147927	.	-	1	Parent=comp160215_c0_seq1.mrna1;Target=comp160215_c0_seq1 633 786 .
ChrX	stalkie_big_nohaplotig	CDS	69147984	69148052	.	-	1	Parent=comp160215_c0_seq1.mrna1;Target=comp160215_c0_seq1 787 855 .
ChrX	stalkie_big_nohaplotig	CDS	69148131	69148159	.	-	0	Parent=comp160215_c0_seq1.mrna1;Target=comp160215_c0_seq1 856 884 .
ChrX	gffcl	locus	69396226	69396409	.	+	.	ID=RLOC_00003941;geneIDs=comp239180_c0_seq1.path1;transcripts=comp239180_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69396226	69396409	.	+	.	ID=comp239180_c0_seq1.mrna1;geneID=comp239180_c0_seq1.path1;Name=comp239180_c0_seq1;Dir=indeterminatecoverage=85.6;identity=97.3;matches=179;mismatches=5;indels=0;unknowns=0;Target=comp239180_c0_seq1 214 31 .;CDS_Target=comp239180_c0_seq1 97 32 .;locus=RLOC_00003941
ChrX	stalkie_big_nohaplotig	exon	69396226	69396409	97	+	.	Parent=comp239180_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	69396227	69396292	.	+	0	Parent=comp239180_c0_seq1.mrna1
ChrX	gffcl	locus	69448593	69459884	.	-	.	ID=RLOC_00003942;geneIDs=comp158511_c0_seq1.path1;transcripts=comp158511_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69448593	69459884	.	-	.	ID=comp158511_c0_seq1.mrna1;geneID=comp158511_c0_seq1.path1;Name=comp158511_c0_seq1;Dir=sensecoverage=99.2;identity=97.1;matches=1412;mismatches=40;indels=2;unknowns=0;locus=RLOC_00003942
ChrX	stalkie_big_nohaplotig	exon	69448593	69449329	94	-	.	Parent=comp158511_c0_seq1.mrna1;Target=comp158511_c0_seq1 722 1460 +
ChrX	stalkie_big_nohaplotig	exon	69459015	69459521	99	-	.	Parent=comp158511_c0_seq1.mrna1;Target=comp158511_c0_seq1 215 721 +
ChrX	stalkie_big_nohaplotig	exon	69459619	69459699	98	-	.	Parent=comp158511_c0_seq1.mrna1;Target=comp158511_c0_seq1 134 214 +
ChrX	stalkie_big_nohaplotig	exon	69459758	69459884	100	-	.	Parent=comp158511_c0_seq1.mrna1;Target=comp158511_c0_seq1 7 133 +
ChrX	stalkie_big_nohaplotig	CDS	69459419	69459521	.	-	1	Parent=comp158511_c0_seq1.mrna1;Target=comp158511_c0_seq1 215 317 +
ChrX	stalkie_big_nohaplotig	CDS	69459619	69459699	.	-	1	Parent=comp158511_c0_seq1.mrna1;Target=comp158511_c0_seq1 134 214 +
ChrX	stalkie_big_nohaplotig	CDS	69459758	69459768	.	-	0	Parent=comp158511_c0_seq1.mrna1;Target=comp158511_c0_seq1 123 133 +
ChrX	gffcl	locus	69449805	69452988	.	+	.	ID=RLOC_00003943;geneIDs=comp163652_c0_seq1.path1;transcripts=comp163652_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69449805	69452988	.	+	.	ID=comp163652_c0_seq1.mrna1;geneID=comp163652_c0_seq1.path1;Name=comp163652_c0_seq1;Dir=sensecoverage=100.0;identity=96.3;matches=2830;mismatches=63;indels=45;unknowns=0;locus=RLOC_00003943
ChrX	stalkie_big_nohaplotig	exon	69449805	69450036	97	+	.	Parent=comp163652_c0_seq1.mrna1;Target=comp163652_c0_seq1 1 232 +
ChrX	stalkie_big_nohaplotig	exon	69450101	69450166	100	+	.	Parent=comp163652_c0_seq1.mrna1;Target=comp163652_c0_seq1 233 298 +
ChrX	stalkie_big_nohaplotig	exon	69450224	69450615	99	+	.	Parent=comp163652_c0_seq1.mrna1;Target=comp163652_c0_seq1 299 690 +
ChrX	stalkie_big_nohaplotig	exon	69450778	69452988	95	+	.	Parent=comp163652_c0_seq1.mrna1;Target=comp163652_c0_seq1 691 2930 +
ChrX	stalkie_big_nohaplotig	CDS	69449939	69450036	.	+	0	Parent=comp163652_c0_seq1.mrna1;Target=comp163652_c0_seq1 135 232 +
ChrX	stalkie_big_nohaplotig	CDS	69450101	69450166	.	+	1	Parent=comp163652_c0_seq1.mrna1;Target=comp163652_c0_seq1 233 298 +
ChrX	stalkie_big_nohaplotig	CDS	69450224	69450608	.	+	1	Parent=comp163652_c0_seq1.mrna1;Target=comp163652_c0_seq1 299 683 +
ChrX	gffcl	locus	69548307	69548923	.	+	.	ID=RLOC_00003944;geneIDs=comp150201_c0_seq1.path1;transcripts=comp150201_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69548307	69548923	.	+	.	ID=comp150201_c0_seq1.mrna1;geneID=comp150201_c0_seq1.path1;Name=comp150201_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=538;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003944
ChrX	stalkie_big_nohaplotig	exon	69548307	69548594	100	+	.	Parent=comp150201_c0_seq1.mrna1;Target=comp150201_c0_seq1 1 288 +
ChrX	stalkie_big_nohaplotig	exon	69548674	69548923	100	+	.	Parent=comp150201_c0_seq1.mrna1;Target=comp150201_c0_seq1 289 538 +
ChrX	stalkie_big_nohaplotig	CDS	69548427	69548594	.	+	0	Parent=comp150201_c0_seq1.mrna1;Target=comp150201_c0_seq1 121 288 +
ChrX	stalkie_big_nohaplotig	CDS	69548674	69548781	.	+	0	Parent=comp150201_c0_seq1.mrna1;Target=comp150201_c0_seq1 289 396 +
ChrX	gffcl	locus	69554284	69555086	.	-	.	ID=RLOC_00003945;geneIDs=comp65711_c0_seq1.path1;transcripts=comp65711_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69554284	69555086	.	-	.	ID=comp65711_c0_seq1.mrna1;geneID=comp65711_c0_seq1.path1;Name=comp65711_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=630;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003945
ChrX	stalkie_big_nohaplotig	exon	69554284	69554683	100	-	.	Parent=comp65711_c0_seq1.mrna1;Target=comp65711_c0_seq1 1 400 -
ChrX	stalkie_big_nohaplotig	exon	69554743	69554813	100	-	.	Parent=comp65711_c0_seq1.mrna1;Target=comp65711_c0_seq1 401 471 -
ChrX	stalkie_big_nohaplotig	exon	69554928	69555086	100	-	.	Parent=comp65711_c0_seq1.mrna1;Target=comp65711_c0_seq1 472 630 -
ChrX	stalkie_big_nohaplotig	CDS	69554485	69554683	.	-	1	Parent=comp65711_c0_seq1.mrna1;Target=comp65711_c0_seq1 202 400 .
ChrX	stalkie_big_nohaplotig	CDS	69554743	69554813	.	-	0	Parent=comp65711_c0_seq1.mrna1;Target=comp65711_c0_seq1 401 471 .
ChrX	stalkie_big_nohaplotig	CDS	69554928	69554990	.	-	0	Parent=comp65711_c0_seq1.mrna1;Target=comp65711_c0_seq1 472 534 .
ChrX	gffcl	locus	69564076	69564716	.	-	.	ID=RLOC_00003946;geneIDs=comp143580_c0_seq1.path1;transcripts=comp143580_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69564076	69564716	.	-	.	ID=comp143580_c0_seq1.mrna1;geneID=comp143580_c0_seq1.path1;Name=comp143580_c0_seq1;Dir=antisensecoverage=65.7;identity=90.3;matches=465;mismatches=19;indels=31;unknowns=0;locus=RLOC_00003946
ChrX	stalkie_big_nohaplotig	exon	69564076	69564385	87	-	.	Parent=comp143580_c0_seq1.mrna1;Target=comp143580_c0_seq1 2 320 -
ChrX	stalkie_big_nohaplotig	exon	69564474	69564558	100	-	.	Parent=comp143580_c0_seq1.mrna1;Target=comp143580_c0_seq1 321 405 -
ChrX	stalkie_big_nohaplotig	exon	69564617	69564716	92	-	.	Parent=comp143580_c0_seq1.mrna1;Target=comp143580_c0_seq1 406 505 -
ChrX	stalkie_big_nohaplotig	CDS	69564533	69564558	.	-	2	Parent=comp143580_c0_seq1.mrna1;Target=comp143580_c0_seq1 380 405 .
ChrX	stalkie_big_nohaplotig	CDS	69564617	69564716	.	-	0	Parent=comp143580_c0_seq1.mrna1;Target=comp143580_c0_seq1 406 505 .
ChrX	gffcl	locus	69565142	69566282	.	-	.	ID=RLOC_00003947;geneIDs=comp157703_c0_seq1.path1;transcripts=comp157703_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69565142	69566282	.	-	.	ID=comp157703_c0_seq1.mrna1;geneID=comp157703_c0_seq1.path1;Name=comp157703_c0_seq1;Dir=antisensecoverage=99.2;identity=99.7;matches=1030;mismatches=3;indels=0;unknowns=0;Target=comp157703_c0_seq1 399 851 .;locus=RLOC_00003947
ChrX	stalkie_big_nohaplotig	exon	69565142	69565319	99	-	.	Parent=comp157703_c0_seq1.mrna1;Target=comp157703_c0_seq1 1 178 -
ChrX	stalkie_big_nohaplotig	exon	69565371	69565508	100	-	.	Parent=comp157703_c0_seq1.mrna1;Target=comp157703_c0_seq1 179 316 -
ChrX	stalkie_big_nohaplotig	exon	69565566	69566282	99	-	.	Parent=comp157703_c0_seq1.mrna1;Target=comp157703_c0_seq1 317 1033 -
ChrX	stalkie_big_nohaplotig	CDS	69565648	69566100	.	-	0	Parent=comp157703_c0_seq1.mrna1
ChrX	gffcl	locus	69642162	69643449	.	-	.	ID=RLOC_00003948;geneIDs=comp152360_c0_seq1.path1;transcripts=comp152360_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69642162	69643449	.	-	.	ID=comp152360_c0_seq1.mrna1;geneID=comp152360_c0_seq1.path1;Name=comp152360_c0_seq1;Dir=sensecoverage=99.9;identity=100.0;matches=678;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003948
ChrX	stalkie_big_nohaplotig	exon	69642162	69642444	100	-	.	Parent=comp152360_c0_seq1.mrna1;Target=comp152360_c0_seq1 397 679 +
ChrX	stalkie_big_nohaplotig	exon	69642510	69642694	100	-	.	Parent=comp152360_c0_seq1.mrna1;Target=comp152360_c0_seq1 212 396 +
ChrX	stalkie_big_nohaplotig	exon	69643170	69643250	100	-	.	Parent=comp152360_c0_seq1.mrna1;Target=comp152360_c0_seq1 131 211 +
ChrX	stalkie_big_nohaplotig	exon	69643321	69643449	100	-	.	Parent=comp152360_c0_seq1.mrna1;Target=comp152360_c0_seq1 2 130 +
ChrX	stalkie_big_nohaplotig	CDS	69642547	69642694	.	-	1	Parent=comp152360_c0_seq1.mrna1;Target=comp152360_c0_seq1 212 359 +
ChrX	stalkie_big_nohaplotig	CDS	69643170	69643250	.	-	1	Parent=comp152360_c0_seq1.mrna1;Target=comp152360_c0_seq1 131 211 +
ChrX	stalkie_big_nohaplotig	CDS	69643321	69643349	.	-	0	Parent=comp152360_c0_seq1.mrna1;Target=comp152360_c0_seq1 102 130 +
ChrX	gffcl	locus	69669415	69681089	.	-	.	ID=RLOC_00003949;geneIDs=comp148777_c0_seq1.path1;transcripts=comp148777_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69669415	69681089	.	-	.	ID=comp148777_c0_seq1.mrna1;geneID=comp148777_c0_seq1.path1;Name=comp148777_c0_seq1;Dir=indeterminatecoverage=94.8;identity=98.7;matches=377;mismatches=5;indels=0;unknowns=0;Target=comp148777_c0_seq1 358 275 .;locus=RLOC_00003949
ChrX	stalkie_big_nohaplotig	exon	69669415	69669589	97	-	.	Parent=comp148777_c0_seq1.mrna1;Target=comp148777_c0_seq1 403 229 .
ChrX	stalkie_big_nohaplotig	exon	69680883	69681089	99	-	.	Parent=comp148777_c0_seq1.mrna1;Target=comp148777_c0_seq1 228 22 .
ChrX	stalkie_big_nohaplotig	CDS	69669460	69669543	.	-	0	Parent=comp148777_c0_seq1.mrna1
ChrX	gffcl	locus	69683415	69683945	.	-	.	ID=RLOC_00003950;geneIDs=comp149894_c0_seq1.path1;transcripts=comp149894_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69683415	69683945	.	-	.	ID=comp149894_c0_seq1.mrna1;geneID=comp149894_c0_seq1.path1;Name=comp149894_c0_seq1;Dir=indeterminatecoverage=97.1;identity=97.4;matches=518;mismatches=13;indels=1;unknowns=0;Target=comp149894_c0_seq1 532 1 .;CDS_Target=comp149894_c0_seq1 530 447 .;locus=RLOC_00003950
ChrX	stalkie_big_nohaplotig	exon	69683415	69683945	97	-	.	Parent=comp149894_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	69683417	69683499	.	-	0	Parent=comp149894_c0_seq1.mrna1
ChrX	gffcl	locus	69688768	69701829	.	.	.	ID=RLOC_00003951;geneIDs=FBgn0003016.1.path1,comp157300_c0_seq1.path1;transcripts=FBgn0003016.1.mrna1,comp157300_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69688768	69701829	.	-	.	ID=FBgn0003016.1.mrna1;geneID=FBgn0003016.1.path1;Name=FBgn0003016.1;Dir=sensecoverage=100.0;identity=99.8;matches=6857;mismatches=13;indels=0;unknowns=0;locus=RLOC_00003951
ChrX	stalkie_big_nohaplotig	exon	69688768	69690068	99	-	.	Parent=FBgn0003016.1.mrna1;Target=FBgn0003016.1 5570 6870 +
ChrX	stalkie_big_nohaplotig	exon	69692543	69692918	99	-	.	Parent=FBgn0003016.1.mrna1;Target=FBgn0003016.1 5194 5569 +
ChrX	stalkie_big_nohaplotig	exon	69693183	69693288	100	-	.	Parent=FBgn0003016.1.mrna1;Target=FBgn0003016.1 5088 5193 +
ChrX	stalkie_big_nohaplotig	exon	69695544	69695693	100	-	.	Parent=FBgn0003016.1.mrna1;Target=FBgn0003016.1 4938 5087 +
ChrX	stalkie_big_nohaplotig	exon	69695766	69695902	100	-	.	Parent=FBgn0003016.1.mrna1;Target=FBgn0003016.1 4801 4937 +
ChrX	stalkie_big_nohaplotig	exon	69696963	69697097	100	-	.	Parent=FBgn0003016.1.mrna1;Target=FBgn0003016.1 4666 4800 +
ChrX	stalkie_big_nohaplotig	exon	69697165	69701829	99	-	.	Parent=FBgn0003016.1.mrna1;Target=FBgn0003016.1 1 4665 +
ChrX	stalkie_big_nohaplotig	CDS	69688768	69690068	.	-	2	Parent=FBgn0003016.1.mrna1;Target=FBgn0003016.1 5570 6870 +
ChrX	stalkie_big_nohaplotig	CDS	69692543	69692918	.	-	0	Parent=FBgn0003016.1.mrna1;Target=FBgn0003016.1 5194 5569 +
ChrX	stalkie_big_nohaplotig	CDS	69693183	69693288	.	-	1	Parent=FBgn0003016.1.mrna1;Target=FBgn0003016.1 5088 5193 +
ChrX	stalkie_big_nohaplotig	CDS	69695544	69695693	.	-	1	Parent=FBgn0003016.1.mrna1;Target=FBgn0003016.1 4938 5087 +
ChrX	stalkie_big_nohaplotig	CDS	69695766	69695902	.	-	0	Parent=FBgn0003016.1.mrna1;Target=FBgn0003016.1 4801 4937 +
ChrX	stalkie_big_nohaplotig	CDS	69696963	69697097	.	-	0	Parent=FBgn0003016.1.mrna1;Target=FBgn0003016.1 4666 4800 +
ChrX	stalkie_big_nohaplotig	CDS	69697165	69701829	.	-	0	Parent=FBgn0003016.1.mrna1;Target=FBgn0003016.1 1 4665 +
ChrX	stalkie_big_nohaplotig	mRNA	69695881	69696962	.	+	.	ID=comp157300_c0_seq1.mrna1;geneID=comp157300_c0_seq1.path1;Name=comp157300_c0_seq1;Dir=indeterminatecoverage=100.0;identity=86.3;matches=1075;mismatches=7;indels=163;unknowns=0;Target=comp157300_c0_seq1 1245 1 .;CDS_Target=comp157300_c0_seq1 111 1 .;locus=RLOC_00003951
ChrX	stalkie_big_nohaplotig	exon	69695881	69696962	86	+	.	Parent=comp157300_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	69695881	69695991	.	+	0	Parent=comp157300_c0_seq1.mrna1
ChrX	gffcl	locus	69709056	69710059	.	+	.	ID=RLOC_00003952;geneIDs=FBgn0000056.1.path1;transcripts=FBgn0000056.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69709056	69710059	.	+	.	ID=FBgn0000056.1.mrna1;geneID=FBgn0000056.1.path1;Name=FBgn0000056.1;Dir=sensecoverage=100.0;identity=99.9;matches=887;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003952
ChrX	stalkie_big_nohaplotig	exon	69709056	69709244	100	+	.	Parent=FBgn0000056.1.mrna1;Target=FBgn0000056.1 1 189 +
ChrX	stalkie_big_nohaplotig	exon	69709301	69709705	100	+	.	Parent=FBgn0000056.1.mrna1;Target=FBgn0000056.1 190 594 +
ChrX	stalkie_big_nohaplotig	exon	69709766	69710059	99	+	.	Parent=FBgn0000056.1.mrna1;Target=FBgn0000056.1 595 888 +
ChrX	stalkie_big_nohaplotig	CDS	69709056	69709244	.	+	0	Parent=FBgn0000056.1.mrna1;Target=FBgn0000056.1 1 189 +
ChrX	stalkie_big_nohaplotig	CDS	69709301	69709705	.	+	0	Parent=FBgn0000056.1.mrna1;Target=FBgn0000056.1 190 594 +
ChrX	stalkie_big_nohaplotig	CDS	69709766	69710059	.	+	0	Parent=FBgn0000056.1.mrna1;Target=FBgn0000056.1 595 888 +
ChrX	gffcl	locus	69750955	69751369	.	-	.	ID=RLOC_00003953;geneIDs=comp66503_c0_seq1.path1;transcripts=comp66503_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69750955	69751369	.	-	.	ID=comp66503_c0_seq1.mrna1;geneID=comp66503_c0_seq1.path1;Name=comp66503_c0_seq1;Dir=indeterminatecoverage=98.8;identity=97.8;matches=406;mismatches=1;indels=8;unknowns=0;Target=comp66503_c0_seq1 407 1 .;CDS_Target=comp66503_c0_seq1 163 56 .;locus=RLOC_00003953
ChrX	stalkie_big_nohaplotig	exon	69750955	69751369	97	-	.	Parent=comp66503_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	69751199	69751314	.	-	0	Parent=comp66503_c0_seq1.mrna1
ChrX	gffcl	locus	69780180	69781017	.	-	.	ID=RLOC_00003954;geneIDs=comp155023_c0_seq1.path1;transcripts=comp155023_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69780180	69781017	.	-	.	ID=comp155023_c0_seq1.mrna1;geneID=comp155023_c0_seq1.path1;Name=comp155023_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=835;mismatches=3;indels=1;unknowns=0;Target=comp155023_c0_seq1 839 1 .;CDS_Target=comp155023_c0_seq1 185 3 .;locus=RLOC_00003954
ChrX	stalkie_big_nohaplotig	exon	69780180	69781017	99	-	.	Parent=comp155023_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	69780833	69781015	.	-	0	Parent=comp155023_c0_seq1.mrna1
ChrX	gffcl	locus	69824131	69824871	.	-	.	ID=RLOC_00003955;geneIDs=ORF1539.path1;transcripts=ORF1539.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69824131	69824871	.	-	.	ID=ORF1539.mrna1;geneID=ORF1539.path1;Name=ORF1539;Dir=indeterminatecoverage=69.4;identity=96.2;matches=713;mismatches=28;indels=0;unknowns=0;Target=ORF1539 741 1 .;locus=RLOC_00003955
ChrX	stalkie_big_nohaplotig	exon	69824131	69824871	96	-	.	Parent=ORF1539.mrna1
ChrX	stalkie_big_nohaplotig	CDS	69824131	69824871	.	-	0	Parent=ORF1539.mrna1
ChrX	gffcl	locus	69833226	69834695	.	+	.	ID=RLOC_00003956;geneIDs=comp151149_c0_seq1.path1;transcripts=comp151149_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69833226	69834695	.	+	.	ID=comp151149_c0_seq1.mrna1;geneID=comp151149_c0_seq1.path1;Name=comp151149_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.7;matches=1465;mismatches=5;indels=0;unknowns=0;Target=comp151149_c0_seq1 1470 1 .;CDS_Target=comp151149_c0_seq1 1236 106 .;locus=RLOC_00003956
ChrX	stalkie_big_nohaplotig	exon	69833226	69834695	99	+	.	Parent=comp151149_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	69833331	69834461	.	+	0	Parent=comp151149_c0_seq1.mrna1
ChrX	gffcl	locus	69836591	69837155	.	+	.	ID=RLOC_00003957;geneIDs=comp146190_c0_seq1.path1;transcripts=comp146190_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69836591	69837155	.	+	.	ID=comp146190_c0_seq1.mrna1;geneID=comp146190_c0_seq1.path1;Name=comp146190_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=435;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003957
ChrX	stalkie_big_nohaplotig	exon	69836591	69836791	98	+	.	Parent=comp146190_c0_seq1.mrna1;Target=comp146190_c0_seq1 1 201 +
ChrX	stalkie_big_nohaplotig	exon	69836846	69836917	100	+	.	Parent=comp146190_c0_seq1.mrna1;Target=comp146190_c0_seq1 202 273 +
ChrX	stalkie_big_nohaplotig	exon	69836991	69837155	100	+	.	Parent=comp146190_c0_seq1.mrna1;Target=comp146190_c0_seq1 274 438 +
ChrX	stalkie_big_nohaplotig	CDS	69836764	69836791	.	+	0	Parent=comp146190_c0_seq1.mrna1;Target=comp146190_c0_seq1 174 201 +
ChrX	stalkie_big_nohaplotig	CDS	69836846	69836917	.	+	2	Parent=comp146190_c0_seq1.mrna1;Target=comp146190_c0_seq1 202 273 +
ChrX	stalkie_big_nohaplotig	CDS	69836991	69837154	.	+	2	Parent=comp146190_c0_seq1.mrna1;Target=comp146190_c0_seq1 274 437 +
ChrX	gffcl	locus	69849521	69849995	.	+	.	ID=RLOC_00003959;geneIDs=comp154248_c0_seq1.path1;transcripts=comp154248_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69849521	69849995	.	+	.	ID=comp154248_c0_seq1.mrna1;geneID=comp154248_c0_seq1.path1;Name=comp154248_c0_seq1;Dir=sensecoverage=98.9;identity=98.4;matches=358;mismatches=6;indels=0;unknowns=0;Target=comp154248_c0_seq1 3 35 +;locus=RLOC_00003959
ChrX	stalkie_big_nohaplotig	exon	69849521	69849595	97	+	.	Parent=comp154248_c0_seq1.mrna1;Target=comp154248_c0_seq1 1 75 +
ChrX	stalkie_big_nohaplotig	exon	69849650	69849712	95	+	.	Parent=comp154248_c0_seq1.mrna1;Target=comp154248_c0_seq1 76 138 +
ChrX	stalkie_big_nohaplotig	exon	69849770	69849995	99	+	.	Parent=comp154248_c0_seq1.mrna1;Target=comp154248_c0_seq1 139 364 +
ChrX	stalkie_big_nohaplotig	CDS	69849523	69849555	.	+	0	Parent=comp154248_c0_seq1.mrna1
ChrX	gffcl	locus	69894942	69896572	.	-	.	ID=RLOC_00003960;geneIDs=ORF1398.path1;transcripts=ORF1398.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69894942	69896572	.	-	.	ID=ORF1398.mrna1;geneID=ORF1398.path1;Name=ORF1398;Dir=sensecoverage=100.0;identity=100.0;matches=1116;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003960
ChrX	stalkie_big_nohaplotig	exon	69894942	69895183	100	-	.	Parent=ORF1398.mrna1;Target=ORF1398 875 1116 +
ChrX	stalkie_big_nohaplotig	exon	69895274	69895354	100	-	.	Parent=ORF1398.mrna1;Target=ORF1398 794 874 +
ChrX	stalkie_big_nohaplotig	exon	69895421	69895603	100	-	.	Parent=ORF1398.mrna1;Target=ORF1398 611 793 +
ChrX	stalkie_big_nohaplotig	exon	69895904	69896336	100	-	.	Parent=ORF1398.mrna1;Target=ORF1398 178 610 +
ChrX	stalkie_big_nohaplotig	exon	69896396	69896572	100	-	.	Parent=ORF1398.mrna1;Target=ORF1398 1 177 +
ChrX	stalkie_big_nohaplotig	CDS	69894942	69895183	.	-	2	Parent=ORF1398.mrna1;Target=ORF1398 875 1116 +
ChrX	stalkie_big_nohaplotig	CDS	69895274	69895354	.	-	2	Parent=ORF1398.mrna1;Target=ORF1398 794 874 +
ChrX	stalkie_big_nohaplotig	CDS	69895421	69895603	.	-	2	Parent=ORF1398.mrna1;Target=ORF1398 611 793 +
ChrX	stalkie_big_nohaplotig	CDS	69895904	69896336	.	-	0	Parent=ORF1398.mrna1;Target=ORF1398 178 610 +
ChrX	stalkie_big_nohaplotig	CDS	69896396	69896572	.	-	0	Parent=ORF1398.mrna1;Target=ORF1398 1 177 +
ChrX	gffcl	locus	69906443	69906887	.	+	.	ID=RLOC_00003961;geneIDs=comp1004430_c0_seq1.path1;transcripts=comp1004430_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69906443	69906887	.	+	.	ID=comp1004430_c0_seq1.mrna1;geneID=comp1004430_c0_seq1.path1;Name=comp1004430_c0_seq1;Dir=sensecoverage=99.5;identity=100.0;matches=385;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003961
ChrX	stalkie_big_nohaplotig	exon	69906443	69906699	100	+	.	Parent=comp1004430_c0_seq1.mrna1;Target=comp1004430_c0_seq1 1 257 +
ChrX	stalkie_big_nohaplotig	exon	69906760	69906887	100	+	.	Parent=comp1004430_c0_seq1.mrna1;Target=comp1004430_c0_seq1 258 385 +
ChrX	stalkie_big_nohaplotig	CDS	69906445	69906699	.	+	0	Parent=comp1004430_c0_seq1.mrna1;Target=comp1004430_c0_seq1 3 257 +
ChrX	stalkie_big_nohaplotig	CDS	69906760	69906810	.	+	0	Parent=comp1004430_c0_seq1.mrna1;Target=comp1004430_c0_seq1 258 308 +
ChrX	gffcl	locus	69915880	69916324	.	+	.	ID=RLOC_00003962;geneIDs=comp1004430_c0_seq1.path2;transcripts=comp1004430_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	69915880	69916324	.	+	.	ID=comp1004430_c0_seq1.mrna2;geneID=comp1004430_c0_seq1.path2;Name=comp1004430_c0_seq1;Dir=sensecoverage=99.5;identity=100.0;matches=385;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003962
ChrX	stalkie_big_nohaplotig	exon	69915880	69916136	100	+	.	Parent=comp1004430_c0_seq1.mrna2;Target=comp1004430_c0_seq1 1 257 +
ChrX	stalkie_big_nohaplotig	exon	69916197	69916324	100	+	.	Parent=comp1004430_c0_seq1.mrna2;Target=comp1004430_c0_seq1 258 385 +
ChrX	stalkie_big_nohaplotig	CDS	69915882	69916136	.	+	0	Parent=comp1004430_c0_seq1.mrna2;Target=comp1004430_c0_seq1 3 257 +
ChrX	stalkie_big_nohaplotig	CDS	69916197	69916247	.	+	0	Parent=comp1004430_c0_seq1.mrna2;Target=comp1004430_c0_seq1 258 308 +
ChrX	gffcl	locus	69988293	69988787	.	-	.	ID=RLOC_00003963;geneIDs=comp150819_c0_seq1.path1;transcripts=comp150819_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69988293	69988787	.	-	.	ID=comp150819_c0_seq1.mrna1;geneID=comp150819_c0_seq1.path1;Name=comp150819_c0_seq1;Dir=sensecoverage=99.8;identity=99.8;matches=442;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003963
ChrX	stalkie_big_nohaplotig	exon	69988293	69988467	99	-	.	Parent=comp150819_c0_seq1.mrna1;Target=comp150819_c0_seq1 269 443 +
ChrX	stalkie_big_nohaplotig	exon	69988520	69988787	100	-	.	Parent=comp150819_c0_seq1.mrna1;Target=comp150819_c0_seq1 1 268 +
ChrX	stalkie_big_nohaplotig	CDS	69988375	69988467	.	-	0	Parent=comp150819_c0_seq1.mrna1;Target=comp150819_c0_seq1 269 361 +
ChrX	stalkie_big_nohaplotig	CDS	69988520	69988681	.	-	0	Parent=comp150819_c0_seq1.mrna1;Target=comp150819_c0_seq1 107 268 +
ChrX	gffcl	locus	69993433	69994571	.	-	.	ID=RLOC_00003964;geneIDs=comp156140_c0_seq1.path1;transcripts=comp156140_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	69993433	69994571	.	-	.	ID=comp156140_c0_seq1.mrna1;geneID=comp156140_c0_seq1.path1;Name=comp156140_c0_seq1;Dir=antisensecoverage=99.4;identity=99.7;matches=1077;mismatches=3;indels=0;unknowns=0;Target=comp156140_c0_seq1 379 981 .;locus=RLOC_00003964
ChrX	stalkie_big_nohaplotig	exon	69993433	69993677	99	-	.	Parent=comp156140_c0_seq1.mrna1;Target=comp156140_c0_seq1 1 245 -
ChrX	stalkie_big_nohaplotig	exon	69993737	69994571	99	-	.	Parent=comp156140_c0_seq1.mrna1;Target=comp156140_c0_seq1 246 1080 -
ChrX	stalkie_big_nohaplotig	CDS	69993870	69994472	.	-	0	Parent=comp156140_c0_seq1.mrna1
ChrX	gffcl	locus	69998823	69999889	.	-	.	ID=RLOC_00003965;geneIDs=ORF1539.path2;transcripts=ORF1539.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	69998823	69999889	.	-	.	ID=ORF1539.mrna2;geneID=ORF1539.path2;Name=ORF1539;Dir=indeterminatecoverage=99.9;identity=89.6;matches=957;mismatches=109;indels=2;unknowns=0;Target=ORF1539 1068 2 .;CDS_Target=ORF1539 1068 55 .;locus=RLOC_00003965
ChrX	stalkie_big_nohaplotig	exon	69998823	69999889	89	-	.	Parent=ORF1539.mrna2
ChrX	stalkie_big_nohaplotig	CDS	69998823	69999836	.	-	0	Parent=ORF1539.mrna2
ChrX	gffcl	locus	70021345	70021930	.	+	.	ID=RLOC_00003967;geneIDs=comp155261_c0_seq1.path1;transcripts=comp155261_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70021345	70021930	.	+	.	ID=comp155261_c0_seq1.mrna1;geneID=comp155261_c0_seq1.path1;Name=comp155261_c0_seq1;Dir=antisensecoverage=100.0;identity=99.2;matches=515;mismatches=4;indels=0;unknowns=0;locus=RLOC_00003967
ChrX	stalkie_big_nohaplotig	exon	70021345	70021562	98	+	.	Parent=comp155261_c0_seq1.mrna1;Target=comp155261_c0_seq1 302 519 -
ChrX	stalkie_big_nohaplotig	exon	70021630	70021930	99	+	.	Parent=comp155261_c0_seq1.mrna1;Target=comp155261_c0_seq1 1 301 -
ChrX	stalkie_big_nohaplotig	CDS	70021401	70021562	.	+	0	Parent=comp155261_c0_seq1.mrna1;Target=comp155261_c0_seq1 302 463 .
ChrX	stalkie_big_nohaplotig	CDS	70021630	70021722	.	+	0	Parent=comp155261_c0_seq1.mrna1;Target=comp155261_c0_seq1 209 301 .
ChrX	gffcl	locus	70025211	70026030	.	-	.	ID=RLOC_00003968;geneIDs=comp162684_c0_seq1.path1;transcripts=comp162684_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70025211	70026030	.	-	.	ID=comp162684_c0_seq1.mrna1;geneID=comp162684_c0_seq1.path1;Name=comp162684_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=760;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003968
ChrX	stalkie_big_nohaplotig	exon	70025211	70025388	99	-	.	Parent=comp162684_c0_seq1.mrna1;Target=comp162684_c0_seq1 586 763 +
ChrX	stalkie_big_nohaplotig	exon	70025446	70026030	99	-	.	Parent=comp162684_c0_seq1.mrna1;Target=comp162684_c0_seq1 1 585 +
ChrX	stalkie_big_nohaplotig	CDS	70025287	70025388	.	-	0	Parent=comp162684_c0_seq1.mrna1;Target=comp162684_c0_seq1 586 687 +
ChrX	stalkie_big_nohaplotig	CDS	70025446	70025613	.	-	0	Parent=comp162684_c0_seq1.mrna1;Target=comp162684_c0_seq1 418 585 +
ChrX	gffcl	locus	70072252	70073127	.	-	.	ID=RLOC_00003969;geneIDs=comp155164_c0_seq1.path1;transcripts=comp155164_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70072252	70073127	.	-	.	ID=comp155164_c0_seq1.mrna1;geneID=comp155164_c0_seq1.path1;Name=comp155164_c0_seq1;Dir=sensecoverage=96.7;identity=99.4;matches=812;mismatches=5;indels=0;unknowns=0;locus=RLOC_00003969
ChrX	stalkie_big_nohaplotig	exon	70072252	70072887	99	-	.	Parent=comp155164_c0_seq1.mrna1;Target=comp155164_c0_seq1 210 845 +
ChrX	stalkie_big_nohaplotig	exon	70072947	70073127	99	-	.	Parent=comp155164_c0_seq1.mrna1;Target=comp155164_c0_seq1 29 209 +
ChrX	stalkie_big_nohaplotig	CDS	70072355	70072887	.	-	2	Parent=comp155164_c0_seq1.mrna1;Target=comp155164_c0_seq1 210 742 +
ChrX	stalkie_big_nohaplotig	CDS	70072947	70073031	.	-	0	Parent=comp155164_c0_seq1.mrna1;Target=comp155164_c0_seq1 125 209 +
ChrX	gffcl	locus	70183813	70184363	.	-	.	ID=RLOC_00003970;geneIDs=comp157238_c0_seq1.path1;transcripts=comp157238_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70183813	70184363	.	-	.	ID=comp157238_c0_seq1.mrna1;geneID=comp157238_c0_seq1.path1;Name=comp157238_c0_seq1;Dir=sensecoverage=99.8;identity=99.4;matches=466;mismatches=3;indels=0;unknowns=0;locus=RLOC_00003970
ChrX	stalkie_big_nohaplotig	exon	70183813	70183984	100	-	.	Parent=comp157238_c0_seq1.mrna1;Target=comp157238_c0_seq1 298 469 +
ChrX	stalkie_big_nohaplotig	exon	70184067	70184363	98	-	.	Parent=comp157238_c0_seq1.mrna1;Target=comp157238_c0_seq1 1 297 +
ChrX	stalkie_big_nohaplotig	CDS	70183901	70183984	.	-	0	Parent=comp157238_c0_seq1.mrna1;Target=comp157238_c0_seq1 298 381 +
ChrX	stalkie_big_nohaplotig	CDS	70184067	70184234	.	-	0	Parent=comp157238_c0_seq1.mrna1;Target=comp157238_c0_seq1 130 297 +
ChrX	gffcl	locus	70311766	70314109	.	+	.	ID=RLOC_00003971;geneIDs=ORF304.path1;transcripts=ORF304.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70311766	70314109	.	+	.	ID=ORF304.mrna1;geneID=ORF304.path1;Name=ORF304;Dir=sensecoverage=100.0;identity=99.3;matches=2074;mismatches=14;indels=0;unknowns=0;locus=RLOC_00003971
ChrX	stalkie_big_nohaplotig	exon	70311766	70313338	99	+	.	Parent=ORF304.mrna1;Target=ORF304 1 1573 +
ChrX	stalkie_big_nohaplotig	exon	70313529	70313603	98	+	.	Parent=ORF304.mrna1;Target=ORF304 1574 1648 +
ChrX	stalkie_big_nohaplotig	exon	70313670	70314109	99	+	.	Parent=ORF304.mrna1;Target=ORF304 1649 2088 +
ChrX	stalkie_big_nohaplotig	CDS	70311766	70313338	.	+	0	Parent=ORF304.mrna1;Target=ORF304 1 1573 +
ChrX	stalkie_big_nohaplotig	CDS	70313529	70313603	.	+	2	Parent=ORF304.mrna1;Target=ORF304 1574 1648 +
ChrX	stalkie_big_nohaplotig	CDS	70313670	70314109	.	+	2	Parent=ORF304.mrna1;Target=ORF304 1649 2088 +
ChrX	gffcl	locus	70336261	70337003	.	+	.	ID=RLOC_00003972;geneIDs=comp154926_c0_seq1.path2;transcripts=comp154926_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	70336261	70337003	.	+	.	ID=comp154926_c0_seq1.mrna2;geneID=comp154926_c0_seq1.path2;Name=comp154926_c0_seq1;Dir=antisensecoverage=99.9;identity=98.3;matches=682;mismatches=6;indels=6;unknowns=0;locus=RLOC_00003972
ChrX	stalkie_big_nohaplotig	exon	70336261	70336571	98	+	.	Parent=comp154926_c0_seq1.mrna2;Target=comp154926_c0_seq1 384 694 -
ChrX	stalkie_big_nohaplotig	exon	70336627	70337003	97	+	.	Parent=comp154926_c0_seq1.mrna2;Target=comp154926_c0_seq1 1 383 -
ChrX	stalkie_big_nohaplotig	CDS	70336417	70336571	.	+	0	Parent=comp154926_c0_seq1.mrna2;Target=comp154926_c0_seq1 384 538 .
ChrX	stalkie_big_nohaplotig	CDS	70336627	70337002	.	+	1	Parent=comp154926_c0_seq1.mrna2;Target=comp154926_c0_seq1 2 383 .
ChrX	gffcl	locus	70350940	70362677	.	-	.	ID=RLOC_00003973;geneIDs=comp161571_c0_seq1.path1;transcripts=comp161571_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70350940	70362677	.	-	.	ID=comp161571_c0_seq1.mrna1;geneID=comp161571_c0_seq1.path1;Name=comp161571_c0_seq1;Dir=antisensecoverage=100.0;identity=97.2;matches=1073;mismatches=29;indels=2;unknowns=0;locus=RLOC_00003973
ChrX	stalkie_big_nohaplotig	exon	70350940	70351142	97	-	.	Parent=comp161571_c0_seq1.mrna1;Target=comp161571_c0_seq1 1 203 -
ChrX	stalkie_big_nohaplotig	exon	70351200	70351390	97	-	.	Parent=comp161571_c0_seq1.mrna1;Target=comp161571_c0_seq1 204 394 -
ChrX	stalkie_big_nohaplotig	exon	70351446	70351796	96	-	.	Parent=comp161571_c0_seq1.mrna1;Target=comp161571_c0_seq1 395 747 -
ChrX	stalkie_big_nohaplotig	exon	70352310	70352442	97	-	.	Parent=comp161571_c0_seq1.mrna1;Target=comp161571_c0_seq1 748 880 -
ChrX	stalkie_big_nohaplotig	exon	70356550	70356568	100	-	.	Parent=comp161571_c0_seq1.mrna1;Target=comp161571_c0_seq1 881 899 -
ChrX	stalkie_big_nohaplotig	exon	70359392	70359395	100	-	.	Parent=comp161571_c0_seq1.mrna1;Target=comp161571_c0_seq1 900 903 -
ChrX	stalkie_big_nohaplotig	exon	70360551	70360559	100	-	.	Parent=comp161571_c0_seq1.mrna1;Target=comp161571_c0_seq1 904 912 -
ChrX	stalkie_big_nohaplotig	exon	70362486	70362677	96	-	.	Parent=comp161571_c0_seq1.mrna1;Target=comp161571_c0_seq1 913 1104 -
ChrX	stalkie_big_nohaplotig	CDS	70351711	70351796	.	-	2	Parent=comp161571_c0_seq1.mrna1;Target=comp161571_c0_seq1 662 747 .
ChrX	stalkie_big_nohaplotig	CDS	70352310	70352442	.	-	0	Parent=comp161571_c0_seq1.mrna1;Target=comp161571_c0_seq1 748 880 .
ChrX	stalkie_big_nohaplotig	CDS	70356550	70356568	.	-	1	Parent=comp161571_c0_seq1.mrna1;Target=comp161571_c0_seq1 881 899 .
ChrX	stalkie_big_nohaplotig	CDS	70359392	70359395	.	-	2	Parent=comp161571_c0_seq1.mrna1;Target=comp161571_c0_seq1 900 903 .
ChrX	stalkie_big_nohaplotig	CDS	70360551	70360559	.	-	2	Parent=comp161571_c0_seq1.mrna1;Target=comp161571_c0_seq1 904 912 .
ChrX	stalkie_big_nohaplotig	CDS	70362486	70362675	.	-	0	Parent=comp161571_c0_seq1.mrna1;Target=comp161571_c0_seq1 913 1102 .
ChrX	gffcl	locus	70365381	70366123	.	-	.	ID=RLOC_00003974;geneIDs=comp154926_c0_seq1.path1;transcripts=comp154926_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70365381	70366123	.	-	.	ID=comp154926_c0_seq1.mrna1;geneID=comp154926_c0_seq1.path1;Name=comp154926_c0_seq1;Dir=antisensecoverage=99.9;identity=98.7;matches=685;mismatches=3;indels=6;unknowns=0;locus=RLOC_00003974
ChrX	stalkie_big_nohaplotig	exon	70365381	70365757	97	-	.	Parent=comp154926_c0_seq1.mrna1;Target=comp154926_c0_seq1 1 383 -
ChrX	stalkie_big_nohaplotig	exon	70365813	70366123	100	-	.	Parent=comp154926_c0_seq1.mrna1;Target=comp154926_c0_seq1 384 694 -
ChrX	stalkie_big_nohaplotig	CDS	70365382	70365757	.	-	1	Parent=comp154926_c0_seq1.mrna1;Target=comp154926_c0_seq1 2 383 .
ChrX	stalkie_big_nohaplotig	CDS	70365813	70365967	.	-	0	Parent=comp154926_c0_seq1.mrna1;Target=comp154926_c0_seq1 384 538 .
ChrX	gffcl	locus	70536144	70538319	.	+	.	ID=RLOC_00003975;geneIDs=FBgn0015553.1.path1;transcripts=FBgn0015553.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70536144	70538319	.	+	.	ID=FBgn0015553.1.mrna1;geneID=FBgn0015553.1.path1;Name=FBgn0015553.1;Dir=sensecoverage=100.0;identity=99.5;matches=2113;mismatches=11;indels=0;unknowns=0;locus=RLOC_00003975
ChrX	stalkie_big_nohaplotig	exon	70536144	70536962	99	+	.	Parent=FBgn0015553.1.mrna1;Target=FBgn0015553.1 1 819 +
ChrX	stalkie_big_nohaplotig	exon	70537015	70538319	99	+	.	Parent=FBgn0015553.1.mrna1;Target=FBgn0015553.1 820 2124 +
ChrX	stalkie_big_nohaplotig	CDS	70536144	70536962	.	+	0	Parent=FBgn0015553.1.mrna1;Target=FBgn0015553.1 1 819 +
ChrX	stalkie_big_nohaplotig	CDS	70537015	70538319	.	+	0	Parent=FBgn0015553.1.mrna1;Target=FBgn0015553.1 820 2124 +
ChrX	gffcl	locus	70538674	70539058	.	-	.	ID=RLOC_00003976;geneIDs=comp118581_c0_seq1.path1;transcripts=comp118581_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70538674	70539058	.	-	.	ID=comp118581_c0_seq1.mrna1;geneID=comp118581_c0_seq1.path1;Name=comp118581_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=381;mismatches=4;indels=1;unknowns=0;Target=comp118581_c0_seq1 386 1 .;CDS_Target=comp118581_c0_seq1 205 104 .;locus=RLOC_00003976
ChrX	stalkie_big_nohaplotig	exon	70538674	70539058	98	-	.	Parent=comp118581_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	70538855	70538955	.	-	0	Parent=comp118581_c0_seq1.mrna1
ChrX	gffcl	locus	70541274	70542328	.	-	.	ID=RLOC_00003977;geneIDs=ORF2392.path1;transcripts=ORF2392.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70541274	70542328	.	-	.	ID=ORF2392.mrna1;geneID=ORF2392.path1;Name=ORF2392;Dir=sensecoverage=100.0;identity=99.8;matches=865;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003977
ChrX	stalkie_big_nohaplotig	exon	70541274	70541684	99	-	.	Parent=ORF2392.mrna1;Target=ORF2392 457 867 +
ChrX	stalkie_big_nohaplotig	exon	70541744	70541822	100	-	.	Parent=ORF2392.mrna1;Target=ORF2392 378 456 +
ChrX	stalkie_big_nohaplotig	exon	70541896	70542198	99	-	.	Parent=ORF2392.mrna1;Target=ORF2392 75 377 +
ChrX	stalkie_big_nohaplotig	exon	70542255	70542328	100	-	.	Parent=ORF2392.mrna1;Target=ORF2392 1 74 +
ChrX	stalkie_big_nohaplotig	CDS	70541274	70541684	.	-	0	Parent=ORF2392.mrna1;Target=ORF2392 457 867 +
ChrX	stalkie_big_nohaplotig	CDS	70541744	70541822	.	-	1	Parent=ORF2392.mrna1;Target=ORF2392 378 456 +
ChrX	stalkie_big_nohaplotig	CDS	70541896	70542198	.	-	1	Parent=ORF2392.mrna1;Target=ORF2392 75 377 +
ChrX	stalkie_big_nohaplotig	CDS	70542255	70542328	.	-	0	Parent=ORF2392.mrna1;Target=ORF2392 1 74 +
ChrX	stalkie_big_nohaplotig	mRNA	70554351	71481735	.	+	.	ID=comp160709_c0_seq1.mrna1;geneID=comp160709_c0_seq1.path1;Name=comp160709_c0_seq1;Dir=indeterminatecoverage=81.8;identity=93.5;matches=2233;mismatches=97;indels=58;unknowns=0;Target=comp160709_c0_seq1 2565 2440 .;locus=RLOC_00003978
ChrX	stalkie_big_nohaplotig	exon	70554351	70554502	69	+	.	Parent=comp160709_c0_seq1.mrna1;Target=comp160709_c0_seq1 669 530 .
ChrX	stalkie_big_nohaplotig	exon	70557342	70557345	100	+	.	Parent=comp160709_c0_seq1.mrna1;Target=comp160709_c0_seq1 673 670 .
ChrX	stalkie_big_nohaplotig	exon	70596739	70596744	100	+	.	Parent=comp160709_c0_seq1.mrna1;Target=comp160709_c0_seq1 679 674 .
ChrX	stalkie_big_nohaplotig	exon	70611141	70611147	100	+	.	Parent=comp160709_c0_seq1.mrna1;Target=comp160709_c0_seq1 686 680 .
ChrX	stalkie_big_nohaplotig	exon	70616253	70616261	100	+	.	Parent=comp160709_c0_seq1.mrna1;Target=comp160709_c0_seq1 695 687 .
ChrX	stalkie_big_nohaplotig	exon	70621344	70621351	75	+	.	Parent=comp160709_c0_seq1.mrna1;Target=comp160709_c0_seq1 703 696 .
ChrX	stalkie_big_nohaplotig	exon	70650694	70650700	100	+	.	Parent=comp160709_c0_seq1.mrna1;Target=comp160709_c0_seq1 710 704 .
ChrX	stalkie_big_nohaplotig	exon	70660396	70660458	39	+	.	Parent=comp160709_c0_seq1.mrna1;Target=comp160709_c0_seq1 813 711 .
ChrX	stalkie_big_nohaplotig	exon	70664605	70664632	60	+	.	Parent=comp160709_c0_seq1.mrna1;Target=comp160709_c0_seq1 846 814 .
ChrX	stalkie_big_nohaplotig	exon	70669412	70669422	100	+	.	Parent=comp160709_c0_seq1.mrna1;Target=comp160709_c0_seq1 857 847 .
ChrX	stalkie_big_nohaplotig	exon	71479688	71481735	98	+	.	Parent=comp160709_c0_seq1.mrna1;Target=comp160709_c0_seq1 2904 858 .
ChrX	stalkie_big_nohaplotig	CDS	71481271	71481396	.	+	0	Parent=comp160709_c0_seq1.mrna1
ChrX	gffcl	locus	70568523	70569119	.	-	.	ID=RLOC_00003979;geneIDs=FBgn0029659.1.path1;transcripts=FBgn0029659.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70568523	70569119	.	-	.	ID=FBgn0029659.1.mrna1;geneID=FBgn0029659.1.path1;Name=FBgn0029659.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=595;mismatches=2;indels=0;unknowns=0;Target=FBgn0029659.1 597 1 .;CDS_Target=FBgn0029659.1 597 28 .;locus=RLOC_00003979
ChrX	stalkie_big_nohaplotig	exon	70568523	70569119	99	-	.	Parent=FBgn0029659.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	70568523	70569092	.	-	0	Parent=FBgn0029659.1.mrna1
ChrX	gffcl	locus	70626567	70636212	.	-	.	ID=RLOC_00003980;geneIDs=FBgn0032515.1.path1;transcripts=FBgn0032515.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70626567	70636212	.	-	.	ID=FBgn0032515.1.mrna1;geneID=FBgn0032515.1.path1;Name=FBgn0032515.1;Dir=sensecoverage=100.0;identity=99.9;matches=1283;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003980
ChrX	stalkie_big_nohaplotig	exon	70626567	70626812	100	-	.	Parent=FBgn0032515.1.mrna1;Target=FBgn0032515.1 1039 1284 +
ChrX	stalkie_big_nohaplotig	exon	70632975	70633112	100	-	.	Parent=FBgn0032515.1.mrna1;Target=FBgn0032515.1 901 1038 +
ChrX	stalkie_big_nohaplotig	exon	70634342	70634627	100	-	.	Parent=FBgn0032515.1.mrna1;Target=FBgn0032515.1 615 900 +
ChrX	stalkie_big_nohaplotig	exon	70634690	70635018	99	-	.	Parent=FBgn0032515.1.mrna1;Target=FBgn0032515.1 286 614 +
ChrX	stalkie_big_nohaplotig	exon	70635928	70636212	100	-	.	Parent=FBgn0032515.1.mrna1;Target=FBgn0032515.1 1 285 +
ChrX	stalkie_big_nohaplotig	CDS	70626567	70626812	.	-	0	Parent=FBgn0032515.1.mrna1;Target=FBgn0032515.1 1039 1284 +
ChrX	stalkie_big_nohaplotig	CDS	70632975	70633112	.	-	0	Parent=FBgn0032515.1.mrna1;Target=FBgn0032515.1 901 1038 +
ChrX	stalkie_big_nohaplotig	CDS	70634342	70634627	.	-	1	Parent=FBgn0032515.1.mrna1;Target=FBgn0032515.1 615 900 +
ChrX	stalkie_big_nohaplotig	CDS	70634690	70635018	.	-	0	Parent=FBgn0032515.1.mrna1;Target=FBgn0032515.1 286 614 +
ChrX	stalkie_big_nohaplotig	CDS	70635928	70636212	.	-	0	Parent=FBgn0032515.1.mrna1;Target=FBgn0032515.1 1 285 +
ChrX	gffcl	locus	70644951	70648399	.	+	.	ID=RLOC_00003981;geneIDs=FBgn0086711.1.path1;transcripts=FBgn0086711.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70644951	70648399	.	+	.	ID=FBgn0086711.1.mrna1;geneID=FBgn0086711.1.path1;Name=FBgn0086711.1;Dir=sensecoverage=100.0;identity=99.9;matches=1319;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003981
ChrX	stalkie_big_nohaplotig	exon	70644951	70645127	100	+	.	Parent=FBgn0086711.1.mrna1;Target=FBgn0086711.1 1 177 +
ChrX	stalkie_big_nohaplotig	exon	70645781	70645838	100	+	.	Parent=FBgn0086711.1.mrna1;Target=FBgn0086711.1 178 235 +
ChrX	stalkie_big_nohaplotig	exon	70645908	70646042	100	+	.	Parent=FBgn0086711.1.mrna1;Target=FBgn0086711.1 236 370 +
ChrX	stalkie_big_nohaplotig	exon	70647303	70647737	99	+	.	Parent=FBgn0086711.1.mrna1;Target=FBgn0086711.1 371 805 +
ChrX	stalkie_big_nohaplotig	exon	70647816	70648290	100	+	.	Parent=FBgn0086711.1.mrna1;Target=FBgn0086711.1 806 1280 +
ChrX	stalkie_big_nohaplotig	exon	70648360	70648399	100	+	.	Parent=FBgn0086711.1.mrna1;Target=FBgn0086711.1 1281 1320 +
ChrX	stalkie_big_nohaplotig	CDS	70644951	70645127	.	+	0	Parent=FBgn0086711.1.mrna1;Target=FBgn0086711.1 1 177 +
ChrX	stalkie_big_nohaplotig	CDS	70645781	70645838	.	+	0	Parent=FBgn0086711.1.mrna1;Target=FBgn0086711.1 178 235 +
ChrX	stalkie_big_nohaplotig	CDS	70645908	70646042	.	+	2	Parent=FBgn0086711.1.mrna1;Target=FBgn0086711.1 236 370 +
ChrX	stalkie_big_nohaplotig	CDS	70647303	70647737	.	+	2	Parent=FBgn0086711.1.mrna1;Target=FBgn0086711.1 371 805 +
ChrX	stalkie_big_nohaplotig	CDS	70647816	70648290	.	+	2	Parent=FBgn0086711.1.mrna1;Target=FBgn0086711.1 806 1280 +
ChrX	stalkie_big_nohaplotig	CDS	70648360	70648399	.	+	1	Parent=FBgn0086711.1.mrna1;Target=FBgn0086711.1 1281 1320 +
ChrX	gffcl	locus	70651528	70652234	.	+	.	ID=RLOC_00003982;geneIDs=FBgn0040228.1.path1;transcripts=FBgn0040228.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70651528	70652234	.	+	.	ID=FBgn0040228.1.mrna1;geneID=FBgn0040228.1.path1;Name=FBgn0040228.1;Dir=sensecoverage=100.0;identity=100.0;matches=597;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003982
ChrX	stalkie_big_nohaplotig	exon	70651528	70651617	100	+	.	Parent=FBgn0040228.1.mrna1;Target=FBgn0040228.1 1 90 +
ChrX	stalkie_big_nohaplotig	exon	70651672	70651971	100	+	.	Parent=FBgn0040228.1.mrna1;Target=FBgn0040228.1 91 390 +
ChrX	stalkie_big_nohaplotig	exon	70652028	70652234	100	+	.	Parent=FBgn0040228.1.mrna1;Target=FBgn0040228.1 391 597 +
ChrX	stalkie_big_nohaplotig	CDS	70651528	70651617	.	+	0	Parent=FBgn0040228.1.mrna1;Target=FBgn0040228.1 1 90 +
ChrX	stalkie_big_nohaplotig	CDS	70651672	70651971	.	+	0	Parent=FBgn0040228.1.mrna1;Target=FBgn0040228.1 91 390 +
ChrX	stalkie_big_nohaplotig	CDS	70652028	70652234	.	+	0	Parent=FBgn0040228.1.mrna1;Target=FBgn0040228.1 391 597 +
ChrX	gffcl	locus	70655083	70655912	.	+	.	ID=RLOC_00003983;geneIDs=comp155380_c0_seq1.path1;transcripts=comp155380_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70655083	70655912	.	+	.	ID=comp155380_c0_seq1.mrna1;geneID=comp155380_c0_seq1.path1;Name=comp155380_c0_seq1;Dir=sensecoverage=100.0;identity=99.2;matches=755;mismatches=2;indels=4;unknowns=0;locus=RLOC_00003983
ChrX	stalkie_big_nohaplotig	exon	70655083	70655505	100	+	.	Parent=comp155380_c0_seq1.mrna1;Target=comp155380_c0_seq1 1 423 +
ChrX	stalkie_big_nohaplotig	exon	70655579	70655912	98	+	.	Parent=comp155380_c0_seq1.mrna1;Target=comp155380_c0_seq1 424 761 +
ChrX	stalkie_big_nohaplotig	CDS	70655464	70655505	.	+	0	Parent=comp155380_c0_seq1.mrna1;Target=comp155380_c0_seq1 382 423 +
ChrX	stalkie_big_nohaplotig	CDS	70655579	70655665	.	+	0	Parent=comp155380_c0_seq1.mrna1;Target=comp155380_c0_seq1 424 510 +
ChrX	gffcl	locus	70656261	70656954	.	-	.	ID=RLOC_00003984;geneIDs=comp154633_c0_seq1.path1;transcripts=comp154633_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70656261	70656954	.	-	.	ID=comp154633_c0_seq1.mrna1;geneID=comp154633_c0_seq1.path1;Name=comp154633_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=683;mismatches=11;indels=1;unknowns=0;Target=comp154633_c0_seq1 695 1 .;CDS_Target=comp154633_c0_seq1 122 3 .;locus=RLOC_00003984
ChrX	stalkie_big_nohaplotig	exon	70656261	70656954	98	-	.	Parent=comp154633_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	70656833	70656952	.	-	0	Parent=comp154633_c0_seq1.mrna1
ChrX	gffcl	locus	70658566	70663608	.	+	.	ID=RLOC_00003985;geneIDs=FBgn0032225.path1;transcripts=FBgn0032225.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70658566	70663608	.	+	.	ID=FBgn0032225.mrna1;geneID=FBgn0032225.path1;Name=FBgn0032225;Dir=sensecoverage=97.4;identity=100.0;matches=795;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003985
ChrX	stalkie_big_nohaplotig	exon	70658566	70658658	100	+	.	Parent=FBgn0032225.mrna1;Target=FBgn0032225 1 93 +
ChrX	stalkie_big_nohaplotig	exon	70660881	70660985	100	+	.	Parent=FBgn0032225.mrna1;Target=FBgn0032225 94 198 +
ChrX	stalkie_big_nohaplotig	exon	70662897	70662939	100	+	.	Parent=FBgn0032225.mrna1;Target=FBgn0032225 199 241 +
ChrX	stalkie_big_nohaplotig	exon	70662994	70663167	100	+	.	Parent=FBgn0032225.mrna1;Target=FBgn0032225 242 415 +
ChrX	stalkie_big_nohaplotig	exon	70663229	70663608	100	+	.	Parent=FBgn0032225.mrna1;Target=FBgn0032225 416 795 +
ChrX	stalkie_big_nohaplotig	CDS	70658566	70658658	.	+	0	Parent=FBgn0032225.mrna1;Target=FBgn0032225 1 93 +
ChrX	stalkie_big_nohaplotig	CDS	70660881	70660985	.	+	0	Parent=FBgn0032225.mrna1;Target=FBgn0032225 94 198 +
ChrX	stalkie_big_nohaplotig	CDS	70662897	70662939	.	+	0	Parent=FBgn0032225.mrna1;Target=FBgn0032225 199 241 +
ChrX	stalkie_big_nohaplotig	CDS	70662994	70663167	.	+	2	Parent=FBgn0032225.mrna1;Target=FBgn0032225 242 415 +
ChrX	stalkie_big_nohaplotig	CDS	70663229	70663608	.	+	2	Parent=FBgn0032225.mrna1;Target=FBgn0032225 416 795 +
ChrX	gffcl	locus	70667365	70668532	.	+	.	ID=RLOC_00003986;geneIDs=comp103536_c0_seq1.path1;transcripts=comp103536_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70667365	70668532	.	+	.	ID=comp103536_c0_seq1.mrna1;geneID=comp103536_c0_seq1.path1;Name=comp103536_c0_seq1;Dir=indeterminatecoverage=97.4;identity=99.3;matches=1161;mismatches=6;indels=2;unknowns=0;Target=comp103536_c0_seq1 1199 32 .;CDS_Target=comp103536_c0_seq1 323 132 .;locus=RLOC_00003986
ChrX	stalkie_big_nohaplotig	exon	70667365	70668532	99	+	.	Parent=comp103536_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	70667465	70667656	.	+	0	Parent=comp103536_c0_seq1.mrna1
ChrX	gffcl	locus	70668837	70672984	.	-	.	ID=RLOC_00003987;geneIDs=FBgn0025724.1.path1;transcripts=FBgn0025724.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70668837	70672984	.	-	.	ID=FBgn0025724.1.mrna1;geneID=FBgn0025724.1.path1;Name=FBgn0025724.1;Dir=sensecoverage=100.0;identity=99.9;matches=2765;mismatches=1;indels=3;unknowns=0;locus=RLOC_00003987
ChrX	stalkie_big_nohaplotig	exon	70668837	70670041	99	-	.	Parent=FBgn0025724.1.mrna1;Target=FBgn0025724.1 1562 2769 +
ChrX	stalkie_big_nohaplotig	exon	70670701	70671280	100	-	.	Parent=FBgn0025724.1.mrna1;Target=FBgn0025724.1 982 1561 +
ChrX	stalkie_big_nohaplotig	exon	70671336	70671955	100	-	.	Parent=FBgn0025724.1.mrna1;Target=FBgn0025724.1 362 981 +
ChrX	stalkie_big_nohaplotig	exon	70672624	70672984	99	-	.	Parent=FBgn0025724.1.mrna1;Target=FBgn0025724.1 1 361 +
ChrX	stalkie_big_nohaplotig	CDS	70668837	70670041	.	-	2	Parent=FBgn0025724.1.mrna1;Target=FBgn0025724.1 1562 2769 +
ChrX	stalkie_big_nohaplotig	CDS	70670701	70671280	.	-	0	Parent=FBgn0025724.1.mrna1;Target=FBgn0025724.1 982 1561 +
ChrX	stalkie_big_nohaplotig	CDS	70671336	70671955	.	-	2	Parent=FBgn0025724.1.mrna1;Target=FBgn0025724.1 362 981 +
ChrX	stalkie_big_nohaplotig	CDS	70672624	70672984	.	-	0	Parent=FBgn0025724.1.mrna1;Target=FBgn0025724.1 1 361 +
ChrX	gffcl	locus	70683124	70687120	.	+	.	ID=RLOC_00003988;geneIDs=FBgn0019686.1.path1,comp155377_c0_seq1.path1;transcripts=FBgn0019686.1.mrna1,comp155377_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70683124	70687120	.	+	.	ID=FBgn0019686.1.mrna1;geneID=FBgn0019686.1.path1;Name=FBgn0019686.1;Dir=sensecoverage=100.0;identity=99.6;matches=1417;mismatches=5;indels=0;unknowns=0;locus=RLOC_00003988
ChrX	stalkie_big_nohaplotig	exon	70683124	70683307	100	+	.	Parent=FBgn0019686.1.mrna1;Target=FBgn0019686.1 1 184 +
ChrX	stalkie_big_nohaplotig	exon	70684972	70685129	99	+	.	Parent=FBgn0019686.1.mrna1;Target=FBgn0019686.1 185 342 +
ChrX	stalkie_big_nohaplotig	exon	70685816	70685924	100	+	.	Parent=FBgn0019686.1.mrna1;Target=FBgn0019686.1 343 451 +
ChrX	stalkie_big_nohaplotig	exon	70685983	70686233	100	+	.	Parent=FBgn0019686.1.mrna1;Target=FBgn0019686.1 452 702 +
ChrX	stalkie_big_nohaplotig	exon	70686286	70686466	99	+	.	Parent=FBgn0019686.1.mrna1;Target=FBgn0019686.1 703 883 +
ChrX	stalkie_big_nohaplotig	exon	70686525	70686759	98	+	.	Parent=FBgn0019686.1.mrna1;Target=FBgn0019686.1 884 1118 +
ChrX	stalkie_big_nohaplotig	exon	70686817	70687120	100	+	.	Parent=FBgn0019686.1.mrna1;Target=FBgn0019686.1 1119 1422 +
ChrX	stalkie_big_nohaplotig	CDS	70683124	70683307	.	+	0	Parent=FBgn0019686.1.mrna1;Target=FBgn0019686.1 1 184 +
ChrX	stalkie_big_nohaplotig	CDS	70684972	70685129	.	+	2	Parent=FBgn0019686.1.mrna1;Target=FBgn0019686.1 185 342 +
ChrX	stalkie_big_nohaplotig	CDS	70685816	70685924	.	+	0	Parent=FBgn0019686.1.mrna1;Target=FBgn0019686.1 343 451 +
ChrX	stalkie_big_nohaplotig	CDS	70685983	70686233	.	+	2	Parent=FBgn0019686.1.mrna1;Target=FBgn0019686.1 452 702 +
ChrX	stalkie_big_nohaplotig	CDS	70686286	70686466	.	+	0	Parent=FBgn0019686.1.mrna1;Target=FBgn0019686.1 703 883 +
ChrX	stalkie_big_nohaplotig	CDS	70686525	70686759	.	+	2	Parent=FBgn0019686.1.mrna1;Target=FBgn0019686.1 884 1118 +
ChrX	stalkie_big_nohaplotig	CDS	70686817	70687120	.	+	1	Parent=FBgn0019686.1.mrna1;Target=FBgn0019686.1 1119 1422 +
ChrX	stalkie_big_nohaplotig	mRNA	70685106	70685836	.	+	.	ID=comp155377_c0_seq1.mrna1;geneID=comp155377_c0_seq1.path1;Name=comp155377_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=669;mismatches=2;indels=0;unknowns=0;Target=comp155377_c0_seq1 477 632 .;locus=RLOC_00003988
ChrX	stalkie_big_nohaplotig	exon	70685106	70685129	100	+	.	Parent=comp155377_c0_seq1.mrna1;Target=comp155377_c0_seq1 648 671 -
ChrX	stalkie_big_nohaplotig	exon	70685190	70685836	99	+	.	Parent=comp155377_c0_seq1.mrna1;Target=comp155377_c0_seq1 1 647 -
ChrX	stalkie_big_nohaplotig	CDS	70685205	70685360	.	+	0	Parent=comp155377_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70730212	70730891	.	-	.	ID=comp145706_c0_seq1.mrna1;geneID=comp145706_c0_seq1.path1;Name=comp145706_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.7;matches=678;mismatches=2;indels=0;unknowns=0;Target=comp145706_c0_seq1 680 1 .;CDS_Target=comp145706_c0_seq1 83 3 .;locus=RLOC_00003989
ChrX	stalkie_big_nohaplotig	exon	70730212	70730891	99	-	.	Parent=comp145706_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	70730809	70730889	.	-	0	Parent=comp145706_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70752782	70753126	.	-	.	ID=comp53632_c0_seq1.mrna2;geneID=comp53632_c0_seq1.path2;Name=comp53632_c0_seq1;Dir=indeterminatecoverage=29.1;identity=99.1;matches=343;mismatches=2;indels=1;unknowns=0;Target=comp53632_c0_seq1 1171 826 .;locus=RLOC_00003989
ChrX	stalkie_big_nohaplotig	exon	70752782	70753126	99	-	.	Parent=comp53632_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	70753567	70753777	.	+	.	ID=comp99355_c0_seq1.mrna1;geneID=comp99355_c0_seq1.path1;Name=comp99355_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=211;mismatches=0;indels=0;unknowns=0;Target=comp99355_c0_seq1 211 1 .;CDS_Target=comp99355_c0_seq1 175 71 .;locus=RLOC_00003989
ChrX	stalkie_big_nohaplotig	exon	70753567	70753777	100	+	.	Parent=comp99355_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	70753637	70753741	.	+	0	Parent=comp99355_c0_seq1.mrna1
ChrX	gffcl	locus	70698278	70706568	.	+	.	ID=RLOC_00003990;geneIDs=FBgn0250816.1.path1;transcripts=FBgn0250816.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70698278	70706568	.	+	.	ID=FBgn0250816.1.mrna1;geneID=FBgn0250816.1.path1;Name=FBgn0250816.1;Dir=sensecoverage=100.0;identity=100.0;matches=2615;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003990
ChrX	stalkie_big_nohaplotig	exon	70698278	70698644	100	+	.	Parent=FBgn0250816.1.mrna1;Target=FBgn0250816.1 1 367 +
ChrX	stalkie_big_nohaplotig	exon	70699368	70700785	100	+	.	Parent=FBgn0250816.1.mrna1;Target=FBgn0250816.1 368 1785 +
ChrX	stalkie_big_nohaplotig	exon	70702074	70702257	99	+	.	Parent=FBgn0250816.1.mrna1;Target=FBgn0250816.1 1786 1969 +
ChrX	stalkie_big_nohaplotig	exon	70702320	70702485	100	+	.	Parent=FBgn0250816.1.mrna1;Target=FBgn0250816.1 1970 2135 +
ChrX	stalkie_big_nohaplotig	exon	70704159	70704303	100	+	.	Parent=FBgn0250816.1.mrna1;Target=FBgn0250816.1 2136 2280 +
ChrX	stalkie_big_nohaplotig	exon	70704392	70704643	100	+	.	Parent=FBgn0250816.1.mrna1;Target=FBgn0250816.1 2281 2532 +
ChrX	stalkie_big_nohaplotig	exon	70706485	70706568	100	+	.	Parent=FBgn0250816.1.mrna1;Target=FBgn0250816.1 2533 2616 +
ChrX	stalkie_big_nohaplotig	CDS	70698278	70698644	.	+	0	Parent=FBgn0250816.1.mrna1;Target=FBgn0250816.1 1 367 +
ChrX	stalkie_big_nohaplotig	CDS	70699368	70700785	.	+	2	Parent=FBgn0250816.1.mrna1;Target=FBgn0250816.1 368 1785 +
ChrX	stalkie_big_nohaplotig	CDS	70702074	70702257	.	+	0	Parent=FBgn0250816.1.mrna1;Target=FBgn0250816.1 1786 1969 +
ChrX	stalkie_big_nohaplotig	CDS	70702320	70702485	.	+	2	Parent=FBgn0250816.1.mrna1;Target=FBgn0250816.1 1970 2135 +
ChrX	stalkie_big_nohaplotig	CDS	70704159	70704303	.	+	1	Parent=FBgn0250816.1.mrna1;Target=FBgn0250816.1 2136 2280 +
ChrX	stalkie_big_nohaplotig	CDS	70704392	70704643	.	+	0	Parent=FBgn0250816.1.mrna1;Target=FBgn0250816.1 2281 2532 +
ChrX	stalkie_big_nohaplotig	CDS	70706485	70706568	.	+	0	Parent=FBgn0250816.1.mrna1;Target=FBgn0250816.1 2533 2616 +
ChrX	gffcl	locus	70723353	70726605	.	-	.	ID=RLOC_00003992;geneIDs=comp155099_c1_seq1.path1;transcripts=comp155099_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70723353	70726605	.	-	.	ID=comp155099_c1_seq1.mrna1;geneID=comp155099_c1_seq1.path1;Name=comp155099_c1_seq1;Dir=sensecoverage=100.0;identity=95.9;matches=898;mismatches=13;indels=25;unknowns=0;Target=comp155099_c1_seq1 252 329 +;locus=RLOC_00003992
ChrX	stalkie_big_nohaplotig	exon	70723353	70724103	95	-	.	Parent=comp155099_c1_seq1.mrna1;Target=comp155099_c1_seq1 169 928 +
ChrX	stalkie_big_nohaplotig	exon	70726438	70726605	99	-	.	Parent=comp155099_c1_seq1.mrna1;Target=comp155099_c1_seq1 1 168 +
ChrX	stalkie_big_nohaplotig	CDS	70723945	70724014	.	-	0	Parent=comp155099_c1_seq1.mrna1
ChrX	gffcl	locus	70772329	70774923	.	+	.	ID=RLOC_00003993;geneIDs=FBgn0032512.1.path1;transcripts=FBgn0032512.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70772329	70774923	.	+	.	ID=FBgn0032512.1.mrna1;geneID=FBgn0032512.1.path1;Name=FBgn0032512.1;Dir=sensecoverage=100.0;identity=100.0;matches=2277;mismatches=0;indels=0;unknowns=0;locus=RLOC_00003993
ChrX	stalkie_big_nohaplotig	exon	70772329	70773115	100	+	.	Parent=FBgn0032512.1.mrna1;Target=FBgn0032512.1 1 787 +
ChrX	stalkie_big_nohaplotig	exon	70773274	70774142	100	+	.	Parent=FBgn0032512.1.mrna1;Target=FBgn0032512.1 788 1656 +
ChrX	stalkie_big_nohaplotig	exon	70774303	70774923	100	+	.	Parent=FBgn0032512.1.mrna1;Target=FBgn0032512.1 1657 2277 +
ChrX	stalkie_big_nohaplotig	CDS	70772329	70773115	.	+	0	Parent=FBgn0032512.1.mrna1;Target=FBgn0032512.1 1 787 +
ChrX	stalkie_big_nohaplotig	CDS	70773274	70774142	.	+	2	Parent=FBgn0032512.1.mrna1;Target=FBgn0032512.1 788 1656 +
ChrX	stalkie_big_nohaplotig	CDS	70774303	70774923	.	+	0	Parent=FBgn0032512.1.mrna1;Target=FBgn0032512.1 1657 2277 +
ChrX	gffcl	locus	70776990	70777896	.	-	.	ID=RLOC_00003994;geneIDs=comp153123_c0_seq1.path1;transcripts=comp153123_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70776990	70777896	.	-	.	ID=comp153123_c0_seq1.mrna1;geneID=comp153123_c0_seq1.path1;Name=comp153123_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=898;mismatches=9;indels=11;unknowns=0;Target=comp153123_c0_seq1 918 1 .;CDS_Target=comp153123_c0_seq1 45 1 .;locus=RLOC_00003994
ChrX	stalkie_big_nohaplotig	exon	70776990	70777896	97	-	.	Parent=comp153123_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	70777853	70777896	.	-	0	Parent=comp153123_c0_seq1.mrna1
ChrX	gffcl	locus	70789424	70790988	.	+	.	ID=RLOC_00003995;geneIDs=comp118728_c0_seq1.path1,comp160412_c0_seq1.path1;transcripts=comp160412_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70789995	70790988	.	+	.	ID=comp160412_c0_seq1.mrna1;geneID=comp160412_c0_seq1.path1;Name=comp160412_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.2;matches=990;mismatches=4;indels=4;unknowns=0;Target=comp160412_c0_seq1 1010 13 .;CDS_Target=comp160412_c0_seq1 558 445 .;locus=RLOC_00003995
ChrX	stalkie_big_nohaplotig	exon	70789995	70790988	99	+	.	Parent=comp160412_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	70790424	70790537	.	+	0	Parent=comp160412_c0_seq1.mrna1
ChrX	gffcl	locus	70795728	70817025	.	-	.	ID=RLOC_00003996;geneIDs=FBgn0032223.1.path1;transcripts=FBgn0032223.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70795728	70817025	.	-	.	ID=FBgn0032223.1.mrna1;geneID=FBgn0032223.1.path1;Name=FBgn0032223.1;Dir=sensecoverage=100.0;identity=99.9;matches=2488;mismatches=2;indels=0;unknowns=0;locus=RLOC_00003996
ChrX	stalkie_big_nohaplotig	exon	70795728	70795919	100	-	.	Parent=FBgn0032223.1.mrna1;Target=FBgn0032223.1 2299 2490 +
ChrX	stalkie_big_nohaplotig	exon	70797366	70797499	100	-	.	Parent=FBgn0032223.1.mrna1;Target=FBgn0032223.1 2165 2298 +
ChrX	stalkie_big_nohaplotig	exon	70799025	70799259	100	-	.	Parent=FBgn0032223.1.mrna1;Target=FBgn0032223.1 1930 2164 +
ChrX	stalkie_big_nohaplotig	exon	70800837	70801007	100	-	.	Parent=FBgn0032223.1.mrna1;Target=FBgn0032223.1 1759 1929 +
ChrX	stalkie_big_nohaplotig	exon	70807585	70807718	100	-	.	Parent=FBgn0032223.1.mrna1;Target=FBgn0032223.1 1625 1758 +
ChrX	stalkie_big_nohaplotig	exon	70809191	70810073	99	-	.	Parent=FBgn0032223.1.mrna1;Target=FBgn0032223.1 742 1624 +
ChrX	stalkie_big_nohaplotig	exon	70812541	70812684	100	-	.	Parent=FBgn0032223.1.mrna1;Target=FBgn0032223.1 598 741 +
ChrX	stalkie_big_nohaplotig	exon	70816429	70817025	100	-	.	Parent=FBgn0032223.1.mrna1;Target=FBgn0032223.1 1 597 +
ChrX	stalkie_big_nohaplotig	CDS	70795728	70795919	.	-	0	Parent=FBgn0032223.1.mrna1;Target=FBgn0032223.1 2299 2490 +
ChrX	stalkie_big_nohaplotig	CDS	70797366	70797499	.	-	2	Parent=FBgn0032223.1.mrna1;Target=FBgn0032223.1 2165 2298 +
ChrX	stalkie_big_nohaplotig	CDS	70799025	70799259	.	-	0	Parent=FBgn0032223.1.mrna1;Target=FBgn0032223.1 1930 2164 +
ChrX	stalkie_big_nohaplotig	CDS	70800837	70801007	.	-	0	Parent=FBgn0032223.1.mrna1;Target=FBgn0032223.1 1759 1929 +
ChrX	stalkie_big_nohaplotig	CDS	70807585	70807718	.	-	2	Parent=FBgn0032223.1.mrna1;Target=FBgn0032223.1 1625 1758 +
ChrX	stalkie_big_nohaplotig	CDS	70809191	70810073	.	-	0	Parent=FBgn0032223.1.mrna1;Target=FBgn0032223.1 742 1624 +
ChrX	stalkie_big_nohaplotig	CDS	70812541	70812684	.	-	0	Parent=FBgn0032223.1.mrna1;Target=FBgn0032223.1 598 741 +
ChrX	stalkie_big_nohaplotig	CDS	70816429	70817025	.	-	0	Parent=FBgn0032223.1.mrna1;Target=FBgn0032223.1 1 597 +
ChrX	gffcl	locus	70834227	70837837	.	+	.	ID=RLOC_00003997;geneIDs=FBgn0034432.1.path1;transcripts=FBgn0034432.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70834227	70837837	.	+	.	ID=FBgn0034432.1.mrna1;geneID=FBgn0034432.1.path1;Name=FBgn0034432.1;Dir=sensecoverage=100.0;identity=99.9;matches=1970;mismatches=1;indels=0;unknowns=0;locus=RLOC_00003997
ChrX	stalkie_big_nohaplotig	exon	70834227	70834387	100	+	.	Parent=FBgn0034432.1.mrna1;Target=FBgn0034432.1 1 161 +
ChrX	stalkie_big_nohaplotig	exon	70835078	70835267	100	+	.	Parent=FBgn0034432.1.mrna1;Target=FBgn0034432.1 162 351 +
ChrX	stalkie_big_nohaplotig	exon	70835641	70836132	99	+	.	Parent=FBgn0034432.1.mrna1;Target=FBgn0034432.1 352 843 +
ChrX	stalkie_big_nohaplotig	exon	70836529	70837518	100	+	.	Parent=FBgn0034432.1.mrna1;Target=FBgn0034432.1 844 1833 +
ChrX	stalkie_big_nohaplotig	exon	70837700	70837837	100	+	.	Parent=FBgn0034432.1.mrna1;Target=FBgn0034432.1 1834 1971 +
ChrX	stalkie_big_nohaplotig	CDS	70834227	70834387	.	+	0	Parent=FBgn0034432.1.mrna1;Target=FBgn0034432.1 1 161 +
ChrX	stalkie_big_nohaplotig	CDS	70835078	70835267	.	+	1	Parent=FBgn0034432.1.mrna1;Target=FBgn0034432.1 162 351 +
ChrX	stalkie_big_nohaplotig	CDS	70835641	70836132	.	+	0	Parent=FBgn0034432.1.mrna1;Target=FBgn0034432.1 352 843 +
ChrX	stalkie_big_nohaplotig	CDS	70836529	70837518	.	+	0	Parent=FBgn0034432.1.mrna1;Target=FBgn0034432.1 844 1833 +
ChrX	stalkie_big_nohaplotig	CDS	70837700	70837837	.	+	0	Parent=FBgn0034432.1.mrna1;Target=FBgn0034432.1 1834 1971 +
ChrX	gffcl	locus	70838013	70839843	.	.	.	ID=RLOC_00003998;geneIDs=comp153109_c0_seq1.path1,comp153907_c0_seq1.path1;transcripts=comp153109_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70838013	70839009	.	-	.	ID=comp153109_c0_seq1.mrna1;geneID=comp153109_c0_seq1.path1;Name=comp153109_c0_seq1;Dir=indeterminatecoverage=79.0;identity=99.5;matches=992;mismatches=2;indels=3;unknowns=0;Target=comp153109_c0_seq1 994 1 .;CDS_Target=comp153109_c0_seq1 108 1 .;locus=RLOC_00003998
ChrX	stalkie_big_nohaplotig	exon	70838013	70839009	99	-	.	Parent=comp153109_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	70838902	70839009	.	-	0	Parent=comp153109_c0_seq1.mrna1
ChrX	gffcl	locus	70840015	70840394	.	-	.	ID=RLOC_00003999;geneIDs=comp118836_c0_seq1.path1;transcripts=comp118836_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70840015	70840394	.	-	.	ID=comp118836_c0_seq1.mrna1;geneID=comp118836_c0_seq1.path1;Name=comp118836_c0_seq1;Dir=indeterminatecoverage=98.4;identity=97.9;matches=373;mismatches=7;indels=1;unknowns=0;Target=comp118836_c0_seq1 387 7 .;CDS_Target=comp118836_c0_seq1 104 72 .;locus=RLOC_00003999
ChrX	stalkie_big_nohaplotig	exon	70840015	70840394	97	-	.	Parent=comp118836_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	70840297	70840329	.	-	0	Parent=comp118836_c0_seq1.mrna1
ChrX	gffcl	locus	70840979	70847784	.	-	.	ID=RLOC_00004000;geneIDs=FBgn0000229.1.path1,comp150112_c0_seq1.path1;transcripts=FBgn0000229.1.mrna1,comp150112_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70840979	70847784	.	-	.	ID=FBgn0000229.1.mrna1;geneID=FBgn0000229.1.path1;Name=FBgn0000229.1;Dir=sensecoverage=100.0;identity=100.0;matches=1158;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004000
ChrX	stalkie_big_nohaplotig	exon	70840979	70841110	100	-	.	Parent=FBgn0000229.1.mrna1;Target=FBgn0000229.1 1027 1158 +
ChrX	stalkie_big_nohaplotig	exon	70841493	70841776	100	-	.	Parent=FBgn0000229.1.mrna1;Target=FBgn0000229.1 743 1026 +
ChrX	stalkie_big_nohaplotig	exon	70841842	70842106	100	-	.	Parent=FBgn0000229.1.mrna1;Target=FBgn0000229.1 478 742 +
ChrX	stalkie_big_nohaplotig	exon	70844896	70845093	100	-	.	Parent=FBgn0000229.1.mrna1;Target=FBgn0000229.1 280 477 +
ChrX	stalkie_big_nohaplotig	exon	70845149	70845278	100	-	.	Parent=FBgn0000229.1.mrna1;Target=FBgn0000229.1 150 279 +
ChrX	stalkie_big_nohaplotig	exon	70847636	70847784	100	-	.	Parent=FBgn0000229.1.mrna1;Target=FBgn0000229.1 1 149 +
ChrX	stalkie_big_nohaplotig	CDS	70840979	70841110	.	-	0	Parent=FBgn0000229.1.mrna1;Target=FBgn0000229.1 1027 1158 +
ChrX	stalkie_big_nohaplotig	CDS	70841493	70841776	.	-	2	Parent=FBgn0000229.1.mrna1;Target=FBgn0000229.1 743 1026 +
ChrX	stalkie_big_nohaplotig	CDS	70841842	70842106	.	-	0	Parent=FBgn0000229.1.mrna1;Target=FBgn0000229.1 478 742 +
ChrX	stalkie_big_nohaplotig	CDS	70844896	70845093	.	-	0	Parent=FBgn0000229.1.mrna1;Target=FBgn0000229.1 280 477 +
ChrX	stalkie_big_nohaplotig	CDS	70845149	70845278	.	-	1	Parent=FBgn0000229.1.mrna1;Target=FBgn0000229.1 150 279 +
ChrX	stalkie_big_nohaplotig	CDS	70847636	70847784	.	-	0	Parent=FBgn0000229.1.mrna1;Target=FBgn0000229.1 1 149 +
ChrX	stalkie_big_nohaplotig	mRNA	70842107	70842351	.	-	.	ID=comp150112_c0_seq1.mrna1;geneID=comp150112_c0_seq1.path1;Name=comp150112_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.8;matches=243;mismatches=2;indels=14;unknowns=0;Target=comp150112_c0_seq1 259 1 .;CDS_Target=comp150112_c0_seq1 48 1 .;locus=RLOC_00004000
ChrX	stalkie_big_nohaplotig	exon	70842107	70842351	93	-	.	Parent=comp150112_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	70842304	70842351	.	-	0	Parent=comp150112_c0_seq1.mrna1
ChrX	gffcl	locus	70842354	70842964	.	-	.	ID=RLOC_00004001;geneIDs=comp153853_c0_seq1.path1;transcripts=comp153853_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70842354	70842964	.	-	.	ID=comp153853_c0_seq1.mrna1;geneID=comp153853_c0_seq1.path1;Name=comp153853_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.3;matches=595;mismatches=6;indels=17;unknowns=0;Target=comp153853_c0_seq1 608 1 .;CDS_Target=comp153853_c0_seq1 87 1 .;locus=RLOC_00004001
ChrX	stalkie_big_nohaplotig	exon	70842354	70842964	96	-	.	Parent=comp153853_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	70842868	70842964	.	-	0	Parent=comp153853_c0_seq1.mrna1
ChrX	gffcl	locus	70843017	70843539	.	+	.	ID=RLOC_00004002;geneIDs=comp146155_c0_seq1.path1;transcripts=comp146155_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70843017	70843539	.	+	.	ID=comp146155_c0_seq1.mrna1;geneID=comp146155_c0_seq1.path1;Name=comp146155_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.5;matches=515;mismatches=8;indels=0;unknowns=0;Target=comp146155_c0_seq1 524 2 .;CDS_Target=comp146155_c0_seq1 355 239 .;locus=RLOC_00004002
ChrX	stalkie_big_nohaplotig	exon	70843017	70843539	98	+	.	Parent=comp146155_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	70843254	70843370	.	+	0	Parent=comp146155_c0_seq1.mrna1
ChrX	gffcl	locus	70843607	70843903	.	-	.	ID=RLOC_00004003;geneIDs=comp149637_c1_seq1.path1;transcripts=comp149637_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70843607	70843903	.	-	.	ID=comp149637_c1_seq1.mrna1;geneID=comp149637_c1_seq1.path1;Name=comp149637_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=295;mismatches=2;indels=0;unknowns=0;Target=comp149637_c1_seq1 297 1 .;CDS_Target=comp149637_c1_seq1 130 44 .;locus=RLOC_00004003
ChrX	stalkie_big_nohaplotig	exon	70843607	70843903	99	-	.	Parent=comp149637_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	70843774	70843860	.	-	0	Parent=comp149637_c1_seq1.mrna1
ChrX	gffcl	locus	70863714	70864309	.	+	.	ID=RLOC_00004004;geneIDs=FBgn0003751.1.path1;transcripts=FBgn0003751.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70863714	70864309	.	+	.	ID=FBgn0003751.1.mrna1;geneID=FBgn0003751.1.path1;Name=FBgn0003751.1;Dir=indeterminatecoverage=97.9;identity=99.8;matches=595;mismatches=1;indels=0;unknowns=0;Target=FBgn0003751.1 609 14 .;CDS_Target=FBgn0003751.1 609 16 .;locus=RLOC_00004004
ChrX	stalkie_big_nohaplotig	exon	70863714	70864309	99	+	.	Parent=FBgn0003751.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	70863716	70864309	.	+	0	Parent=FBgn0003751.1.mrna1
ChrX	gffcl	locus	70866652	70867376	.	-	.	ID=RLOC_00004005;geneIDs=FBgn0032236.1.path1;transcripts=FBgn0032236.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70866652	70867376	.	-	.	ID=FBgn0032236.1.mrna1;geneID=FBgn0032236.1.path1;Name=FBgn0032236.1;Dir=sensecoverage=100.0;identity=99.9;matches=671;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004005
ChrX	stalkie_big_nohaplotig	exon	70866652	70867276	99	-	.	Parent=FBgn0032236.1.mrna1;Target=FBgn0032236.1 48 672 +
ChrX	stalkie_big_nohaplotig	exon	70867330	70867376	100	-	.	Parent=FBgn0032236.1.mrna1;Target=FBgn0032236.1 1 47 +
ChrX	stalkie_big_nohaplotig	CDS	70866652	70867276	.	-	1	Parent=FBgn0032236.1.mrna1;Target=FBgn0032236.1 48 672 +
ChrX	stalkie_big_nohaplotig	CDS	70867330	70867376	.	-	0	Parent=FBgn0032236.1.mrna1;Target=FBgn0032236.1 1 47 +
ChrX	gffcl	locus	70871518	70878289	.	+	.	ID=RLOC_00004006;geneIDs=FBgn0260995.1.path1;transcripts=FBgn0260995.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70871518	70878289	.	+	.	ID=FBgn0260995.1.mrna1;geneID=FBgn0260995.1.path1;Name=FBgn0260995.1;Dir=sensecoverage=100.0;identity=99.7;matches=918;mismatches=3;indels=0;unknowns=0;locus=RLOC_00004006
ChrX	stalkie_big_nohaplotig	exon	70871518	70871581	100	+	.	Parent=FBgn0260995.1.mrna1;Target=FBgn0260995.1 1 64 +
ChrX	stalkie_big_nohaplotig	exon	70874253	70874506	99	+	.	Parent=FBgn0260995.1.mrna1;Target=FBgn0260995.1 65 318 +
ChrX	stalkie_big_nohaplotig	exon	70875294	70875410	100	+	.	Parent=FBgn0260995.1.mrna1;Target=FBgn0260995.1 319 435 +
ChrX	stalkie_big_nohaplotig	exon	70875609	70875702	100	+	.	Parent=FBgn0260995.1.mrna1;Target=FBgn0260995.1 436 529 +
ChrX	stalkie_big_nohaplotig	exon	70876823	70876950	99	+	.	Parent=FBgn0260995.1.mrna1;Target=FBgn0260995.1 530 657 +
ChrX	stalkie_big_nohaplotig	exon	70877896	70878064	99	+	.	Parent=FBgn0260995.1.mrna1;Target=FBgn0260995.1 658 826 +
ChrX	stalkie_big_nohaplotig	exon	70878195	70878289	100	+	.	Parent=FBgn0260995.1.mrna1;Target=FBgn0260995.1 827 921 +
ChrX	stalkie_big_nohaplotig	CDS	70871518	70871581	.	+	0	Parent=FBgn0260995.1.mrna1;Target=FBgn0260995.1 1 64 +
ChrX	stalkie_big_nohaplotig	CDS	70874253	70874506	.	+	2	Parent=FBgn0260995.1.mrna1;Target=FBgn0260995.1 65 318 +
ChrX	stalkie_big_nohaplotig	CDS	70875294	70875410	.	+	0	Parent=FBgn0260995.1.mrna1;Target=FBgn0260995.1 319 435 +
ChrX	stalkie_big_nohaplotig	CDS	70875609	70875702	.	+	0	Parent=FBgn0260995.1.mrna1;Target=FBgn0260995.1 436 529 +
ChrX	stalkie_big_nohaplotig	CDS	70876823	70876950	.	+	2	Parent=FBgn0260995.1.mrna1;Target=FBgn0260995.1 530 657 +
ChrX	stalkie_big_nohaplotig	CDS	70877896	70878064	.	+	0	Parent=FBgn0260995.1.mrna1;Target=FBgn0260995.1 658 826 +
ChrX	stalkie_big_nohaplotig	CDS	70878195	70878289	.	+	2	Parent=FBgn0260995.1.mrna1;Target=FBgn0260995.1 827 921 +
ChrX	gffcl	locus	70876105	70876493	.	-	.	ID=RLOC_00004007;geneIDs=comp149954_c1_seq1.path1;transcripts=comp149954_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70876105	70876493	.	-	.	ID=comp149954_c1_seq1.mrna1;geneID=comp149954_c1_seq1.path1;Name=comp149954_c1_seq1;Dir=indeterminatecoverage=97.7;identity=97.7;matches=380;mismatches=9;indels=0;unknowns=0;Target=comp149954_c1_seq1 389 1 .;CDS_Target=comp149954_c1_seq1 47 3 .;locus=RLOC_00004007
ChrX	stalkie_big_nohaplotig	exon	70876105	70876493	97	-	.	Parent=comp149954_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	70876447	70876491	.	-	0	Parent=comp149954_c1_seq1.mrna1
ChrX	gffcl	locus	70883382	70886828	.	+	.	ID=RLOC_00004008;geneIDs=FBgn0032234.1.path1;transcripts=FBgn0032234.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70883382	70886828	.	+	.	ID=FBgn0032234.1.mrna1;geneID=FBgn0032234.1.path1;Name=FBgn0032234.1;Dir=sensecoverage=99.9;identity=99.9;matches=1594;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004008
ChrX	stalkie_big_nohaplotig	exon	70883382	70884171	100	+	.	Parent=FBgn0032234.1.mrna1;Target=FBgn0032234.1 2 791 +
ChrX	stalkie_big_nohaplotig	exon	70885141	70885338	99	+	.	Parent=FBgn0032234.1.mrna1;Target=FBgn0032234.1 792 989 +
ChrX	stalkie_big_nohaplotig	exon	70886161	70886320	100	+	.	Parent=FBgn0032234.1.mrna1;Target=FBgn0032234.1 990 1149 +
ChrX	stalkie_big_nohaplotig	exon	70886382	70886828	100	+	.	Parent=FBgn0032234.1.mrna1;Target=FBgn0032234.1 1150 1596 +
ChrX	stalkie_big_nohaplotig	CDS	70883384	70884171	.	+	0	Parent=FBgn0032234.1.mrna1;Target=FBgn0032234.1 4 791 +
ChrX	stalkie_big_nohaplotig	CDS	70885141	70885338	.	+	1	Parent=FBgn0032234.1.mrna1;Target=FBgn0032234.1 792 989 +
ChrX	stalkie_big_nohaplotig	CDS	70886161	70886320	.	+	1	Parent=FBgn0032234.1.mrna1;Target=FBgn0032234.1 990 1149 +
ChrX	stalkie_big_nohaplotig	CDS	70886382	70886828	.	+	0	Parent=FBgn0032234.1.mrna1;Target=FBgn0032234.1 1150 1596 +
ChrX	gffcl	locus	70888530	70895068	.	-	.	ID=RLOC_00004009;geneIDs=FBgn0019932.1.path1,comp150210_c0_seq1.path1;transcripts=FBgn0019932.1.mrna1,comp150210_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70888530	70895068	.	-	.	ID=FBgn0019932.1.mrna1;geneID=FBgn0019932.1.path1;Name=FBgn0019932.1;Dir=sensecoverage=100.0;identity=99.5;matches=1066;mismatches=5;indels=0;unknowns=0;locus=RLOC_00004009
ChrX	stalkie_big_nohaplotig	exon	70888530	70888688	100	-	.	Parent=FBgn0019932.1.mrna1;Target=FBgn0019932.1 913 1071 +
ChrX	stalkie_big_nohaplotig	exon	70888950	70889105	100	-	.	Parent=FBgn0019932.1.mrna1;Target=FBgn0019932.1 757 912 +
ChrX	stalkie_big_nohaplotig	exon	70890979	70891071	100	-	.	Parent=FBgn0019932.1.mrna1;Target=FBgn0019932.1 664 756 +
ChrX	stalkie_big_nohaplotig	exon	70892365	70892628	100	-	.	Parent=FBgn0019932.1.mrna1;Target=FBgn0019932.1 400 663 +
ChrX	stalkie_big_nohaplotig	exon	70893570	70893738	98	-	.	Parent=FBgn0019932.1.mrna1;Target=FBgn0019932.1 231 399 +
ChrX	stalkie_big_nohaplotig	exon	70894274	70894360	100	-	.	Parent=FBgn0019932.1.mrna1;Target=FBgn0019932.1 144 230 +
ChrX	stalkie_big_nohaplotig	exon	70894926	70895068	97	-	.	Parent=FBgn0019932.1.mrna1;Target=FBgn0019932.1 1 143 +
ChrX	stalkie_big_nohaplotig	CDS	70888530	70888688	.	-	0	Parent=FBgn0019932.1.mrna1;Target=FBgn0019932.1 913 1071 +
ChrX	stalkie_big_nohaplotig	CDS	70888950	70889105	.	-	0	Parent=FBgn0019932.1.mrna1;Target=FBgn0019932.1 757 912 +
ChrX	stalkie_big_nohaplotig	CDS	70890979	70891071	.	-	0	Parent=FBgn0019932.1.mrna1;Target=FBgn0019932.1 664 756 +
ChrX	stalkie_big_nohaplotig	CDS	70892365	70892628	.	-	0	Parent=FBgn0019932.1.mrna1;Target=FBgn0019932.1 400 663 +
ChrX	stalkie_big_nohaplotig	CDS	70893570	70893738	.	-	1	Parent=FBgn0019932.1.mrna1;Target=FBgn0019932.1 231 399 +
ChrX	stalkie_big_nohaplotig	CDS	70894274	70894360	.	-	1	Parent=FBgn0019932.1.mrna1;Target=FBgn0019932.1 144 230 +
ChrX	stalkie_big_nohaplotig	CDS	70894926	70895068	.	-	0	Parent=FBgn0019932.1.mrna1;Target=FBgn0019932.1 1 143 +
ChrX	stalkie_big_nohaplotig	mRNA	70891050	70891823	.	-	.	ID=comp150210_c0_seq1.mrna1;geneID=comp150210_c0_seq1.path1;Name=comp150210_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=773;mismatches=1;indels=0;unknowns=0;Target=comp150210_c0_seq1 774 1 .;CDS_Target=comp150210_c0_seq1 131 3 .;locus=RLOC_00004009
ChrX	stalkie_big_nohaplotig	exon	70891050	70891823	99	-	.	Parent=comp150210_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	70891693	70891821	.	-	0	Parent=comp150210_c0_seq1.mrna1
ChrX	gffcl	locus	70896952	71085254	.	+	.	ID=RLOC_00004010;geneIDs=CPIJ003423.path4,FBgn0027491.1.path1,FBgn0032193.1.path1,comp163982_c2_seq1.path1;transcripts=comp163982_c2_seq1.mrna1,FBgn0027491.1.mrna1,FBgn0032193.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70896952	71083314	.	+	.	ID=comp163982_c2_seq1.mrna1;geneID=comp163982_c2_seq1.path1;Name=comp163982_c2_seq1;Dir=indeterminatecoverage=89.5;identity=99.0;matches=3594;mismatches=31;indels=7;unknowns=0;locus=RLOC_00004010
ChrX	stalkie_big_nohaplotig	exon	70896952	70900364	99	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3413 1 .
ChrX	stalkie_big_nohaplotig	exon	70914203	70914205	100	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3416 3414 .
ChrX	stalkie_big_nohaplotig	exon	70918527	70918533	100	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3423 3417 .
ChrX	stalkie_big_nohaplotig	exon	70926046	70926048	100	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3426 3424 .
ChrX	stalkie_big_nohaplotig	exon	70932826	70932832	100	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3433 3427 .
ChrX	stalkie_big_nohaplotig	exon	70939938	70939943	100	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3439 3434 .
ChrX	stalkie_big_nohaplotig	exon	70944765	70944776	100	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3451 3440 .
ChrX	stalkie_big_nohaplotig	exon	70952003	70952004	100	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3453 3452 .
ChrX	stalkie_big_nohaplotig	exon	70956656	70956658	100	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3456 3454 .
ChrX	stalkie_big_nohaplotig	exon	70964157	70964166	100	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3466 3457 .
ChrX	stalkie_big_nohaplotig	exon	70965718	70965728	100	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3477 3467 .
ChrX	stalkie_big_nohaplotig	exon	70967451	70967457	71	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3484 3478 .
ChrX	stalkie_big_nohaplotig	exon	70979321	70979360	48	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3531 3485 .
ChrX	stalkie_big_nohaplotig	exon	70980986	70980993	100	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3539 3532 .
ChrX	stalkie_big_nohaplotig	exon	70985519	70985534	81	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3604 3589 .
ChrX	stalkie_big_nohaplotig	exon	70986819	70986823	100	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3609 3605 .
ChrX	stalkie_big_nohaplotig	exon	70990519	70990528	100	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3619 3610 .
ChrX	stalkie_big_nohaplotig	exon	70992668	70992675	100	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3627 3620 .
ChrX	stalkie_big_nohaplotig	exon	70998847	70998857	90	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3638 3628 .
ChrX	stalkie_big_nohaplotig	exon	71008615	71008625	100	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3668 3658 .
ChrX	stalkie_big_nohaplotig	exon	71017674	71017683	90	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3694 3685 .
ChrX	stalkie_big_nohaplotig	exon	71071592	71071594	100	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3697 3695 .
ChrX	stalkie_big_nohaplotig	exon	71083299	71083314	100	+	.	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3713 3698 .
ChrX	stalkie_big_nohaplotig	CDS	70897862	70900364	.	+	0	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3413 911 .
ChrX	stalkie_big_nohaplotig	CDS	70914203	70914205	.	+	2	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3416 3414 .
ChrX	stalkie_big_nohaplotig	CDS	70918527	70918533	.	+	2	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3423 3417 .
ChrX	stalkie_big_nohaplotig	CDS	70926046	70926048	.	+	1	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3426 3424 .
ChrX	stalkie_big_nohaplotig	CDS	70932826	70932832	.	+	1	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3433 3427 .
ChrX	stalkie_big_nohaplotig	CDS	70939938	70939943	.	+	0	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3439 3434 .
ChrX	stalkie_big_nohaplotig	CDS	70944765	70944767	.	+	0	Parent=comp163982_c2_seq1.mrna1;Target=comp163982_c2_seq1 3442 3440 .
ChrX	stalkie_big_nohaplotig	mRNA	70980938	70993203	.	+	.	ID=FBgn0027491.1.mrna1;geneID=FBgn0027491.1.path1;Name=FBgn0027491.1;Dir=sensecoverage=100.0;identity=99.8;matches=1521;mismatches=3;indels=0;unknowns=0;locus=RLOC_00004010
ChrX	stalkie_big_nohaplotig	exon	70980938	70981135	98	+	.	Parent=FBgn0027491.1.mrna1;Target=FBgn0027491.1 1 198 +
ChrX	stalkie_big_nohaplotig	exon	70985300	70986136	99	+	.	Parent=FBgn0027491.1.mrna1;Target=FBgn0027491.1 199 1035 +
ChrX	stalkie_big_nohaplotig	exon	70987707	70987844	100	+	.	Parent=FBgn0027491.1.mrna1;Target=FBgn0027491.1 1036 1173 +
ChrX	stalkie_big_nohaplotig	exon	70992719	70992924	100	+	.	Parent=FBgn0027491.1.mrna1;Target=FBgn0027491.1 1174 1379 +
ChrX	stalkie_big_nohaplotig	exon	70993059	70993203	100	+	.	Parent=FBgn0027491.1.mrna1;Target=FBgn0027491.1 1380 1524 +
ChrX	stalkie_big_nohaplotig	CDS	70980938	70981135	.	+	0	Parent=FBgn0027491.1.mrna1;Target=FBgn0027491.1 1 198 +
ChrX	stalkie_big_nohaplotig	CDS	70985300	70986136	.	+	0	Parent=FBgn0027491.1.mrna1;Target=FBgn0027491.1 199 1035 +
ChrX	stalkie_big_nohaplotig	CDS	70987707	70987844	.	+	0	Parent=FBgn0027491.1.mrna1;Target=FBgn0027491.1 1036 1173 +
ChrX	stalkie_big_nohaplotig	CDS	70992719	70992924	.	+	0	Parent=FBgn0027491.1.mrna1;Target=FBgn0027491.1 1174 1379 +
ChrX	stalkie_big_nohaplotig	CDS	70993059	70993203	.	+	1	Parent=FBgn0027491.1.mrna1;Target=FBgn0027491.1 1380 1524 +
ChrX	stalkie_big_nohaplotig	mRNA	71083000	71085254	.	+	.	ID=FBgn0032193.1.mrna1;geneID=FBgn0032193.1.path1;Name=FBgn0032193.1;Dir=sensecoverage=100.0;identity=100.0;matches=576;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004010
ChrX	stalkie_big_nohaplotig	exon	71083000	71083402	100	+	.	Parent=FBgn0032193.1.mrna1;Target=FBgn0032193.1 1 403 +
ChrX	stalkie_big_nohaplotig	exon	71085082	71085254	100	+	.	Parent=FBgn0032193.1.mrna1;Target=FBgn0032193.1 404 576 +
ChrX	stalkie_big_nohaplotig	CDS	71083000	71083402	.	+	0	Parent=FBgn0032193.1.mrna1;Target=FBgn0032193.1 1 403 +
ChrX	stalkie_big_nohaplotig	CDS	71085082	71085254	.	+	2	Parent=FBgn0032193.1.mrna1;Target=FBgn0032193.1 404 576 +
ChrX	gffcl	locus	70916387	70918516	.	+	.	ID=RLOC_00004011;geneIDs=FBgn0026238.1.path1;transcripts=FBgn0026238.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70916387	70918516	.	+	.	ID=FBgn0026238.1.mrna1;geneID=FBgn0026238.1.path1;Name=FBgn0026238.1;Dir=sensecoverage=100.0;identity=100.0;matches=1089;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004011
ChrX	stalkie_big_nohaplotig	exon	70916387	70916445	100	+	.	Parent=FBgn0026238.1.mrna1;Target=FBgn0026238.1 1 59 +
ChrX	stalkie_big_nohaplotig	exon	70917419	70918311	100	+	.	Parent=FBgn0026238.1.mrna1;Target=FBgn0026238.1 60 952 +
ChrX	stalkie_big_nohaplotig	exon	70918380	70918516	100	+	.	Parent=FBgn0026238.1.mrna1;Target=FBgn0026238.1 953 1089 +
ChrX	stalkie_big_nohaplotig	CDS	70916387	70916445	.	+	0	Parent=FBgn0026238.1.mrna1;Target=FBgn0026238.1 1 59 +
ChrX	stalkie_big_nohaplotig	CDS	70917419	70918311	.	+	1	Parent=FBgn0026238.1.mrna1;Target=FBgn0026238.1 60 952 +
ChrX	stalkie_big_nohaplotig	CDS	70918380	70918516	.	+	2	Parent=FBgn0026238.1.mrna1;Target=FBgn0026238.1 953 1089 +
ChrX	gffcl	locus	70919015	70920115	.	+	.	ID=RLOC_00004012;geneIDs=comp158174_c0_seq1.path1;transcripts=comp158174_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70919015	70920115	.	+	.	ID=comp158174_c0_seq1.mrna1;geneID=comp158174_c0_seq1.path1;Name=comp158174_c0_seq1;Dir=indeterminatecoverage=96.7;identity=98.8;matches=1088;mismatches=13;indels=0;unknowns=0;Target=comp158174_c0_seq1 1138 38 .;CDS_Target=comp158174_c0_seq1 1028 837 .;locus=RLOC_00004012
ChrX	stalkie_big_nohaplotig	exon	70919015	70920115	98	+	.	Parent=comp158174_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	70919814	70920005	.	+	0	Parent=comp158174_c0_seq1.mrna1
ChrX	gffcl	locus	70935456	70949866	.	+	.	ID=RLOC_00004013;geneIDs=FBgn0024248.1.path1;transcripts=FBgn0024248.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70935456	70949866	.	+	.	ID=FBgn0024248.1.mrna1;geneID=FBgn0024248.1.path1;Name=FBgn0024248.1;Dir=sensecoverage=100.0;identity=100.0;matches=3018;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004013
ChrX	stalkie_big_nohaplotig	exon	70935456	70935840	100	+	.	Parent=FBgn0024248.1.mrna1;Target=FBgn0024248.1 1 385 +
ChrX	stalkie_big_nohaplotig	exon	70935917	70936097	100	+	.	Parent=FBgn0024248.1.mrna1;Target=FBgn0024248.1 386 566 +
ChrX	stalkie_big_nohaplotig	exon	70940008	70940133	100	+	.	Parent=FBgn0024248.1.mrna1;Target=FBgn0024248.1 567 692 +
ChrX	stalkie_big_nohaplotig	exon	70942456	70942598	100	+	.	Parent=FBgn0024248.1.mrna1;Target=FBgn0024248.1 693 835 +
ChrX	stalkie_big_nohaplotig	exon	70943143	70943401	100	+	.	Parent=FBgn0024248.1.mrna1;Target=FBgn0024248.1 836 1094 +
ChrX	stalkie_big_nohaplotig	exon	70944161	70944255	100	+	.	Parent=FBgn0024248.1.mrna1;Target=FBgn0024248.1 1095 1189 +
ChrX	stalkie_big_nohaplotig	exon	70946616	70946790	100	+	.	Parent=FBgn0024248.1.mrna1;Target=FBgn0024248.1 1190 1364 +
ChrX	stalkie_big_nohaplotig	exon	70948213	70949866	100	+	.	Parent=FBgn0024248.1.mrna1;Target=FBgn0024248.1 1365 3018 +
ChrX	stalkie_big_nohaplotig	CDS	70935456	70935840	.	+	0	Parent=FBgn0024248.1.mrna1;Target=FBgn0024248.1 1 385 +
ChrX	stalkie_big_nohaplotig	CDS	70935917	70936097	.	+	2	Parent=FBgn0024248.1.mrna1;Target=FBgn0024248.1 386 566 +
ChrX	stalkie_big_nohaplotig	CDS	70940008	70940133	.	+	1	Parent=FBgn0024248.1.mrna1;Target=FBgn0024248.1 567 692 +
ChrX	stalkie_big_nohaplotig	CDS	70942456	70942598	.	+	1	Parent=FBgn0024248.1.mrna1;Target=FBgn0024248.1 693 835 +
ChrX	stalkie_big_nohaplotig	CDS	70943143	70943401	.	+	2	Parent=FBgn0024248.1.mrna1;Target=FBgn0024248.1 836 1094 +
ChrX	stalkie_big_nohaplotig	CDS	70944161	70944255	.	+	1	Parent=FBgn0024248.1.mrna1;Target=FBgn0024248.1 1095 1189 +
ChrX	stalkie_big_nohaplotig	CDS	70946616	70946790	.	+	2	Parent=FBgn0024248.1.mrna1;Target=FBgn0024248.1 1190 1364 +
ChrX	stalkie_big_nohaplotig	CDS	70948213	70949866	.	+	1	Parent=FBgn0024248.1.mrna1;Target=FBgn0024248.1 1365 3018 +
ChrX	gffcl	locus	70952212	70955046	.	-	.	ID=RLOC_00004014;geneIDs=AAEL014559.1.path1;transcripts=AAEL014559.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70952212	70955046	.	-	.	ID=AAEL014559.1.mrna1;geneID=AAEL014559.1.path1;Name=AAEL014559.1;Dir=sensecoverage=100.0;identity=100.0;matches=402;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004014
ChrX	stalkie_big_nohaplotig	exon	70952212	70952229	100	-	.	Parent=AAEL014559.1.mrna1;Target=AAEL014559.1 385 402 +
ChrX	stalkie_big_nohaplotig	exon	70954213	70954336	100	-	.	Parent=AAEL014559.1.mrna1;Target=AAEL014559.1 261 384 +
ChrX	stalkie_big_nohaplotig	exon	70954425	70954645	100	-	.	Parent=AAEL014559.1.mrna1;Target=AAEL014559.1 40 260 +
ChrX	stalkie_big_nohaplotig	exon	70955008	70955046	100	-	.	Parent=AAEL014559.1.mrna1;Target=AAEL014559.1 1 39 +
ChrX	stalkie_big_nohaplotig	CDS	70952212	70952229	.	-	0	Parent=AAEL014559.1.mrna1;Target=AAEL014559.1 385 402 +
ChrX	stalkie_big_nohaplotig	CDS	70954213	70954336	.	-	1	Parent=AAEL014559.1.mrna1;Target=AAEL014559.1 261 384 +
ChrX	stalkie_big_nohaplotig	CDS	70954425	70954645	.	-	0	Parent=AAEL014559.1.mrna1;Target=AAEL014559.1 40 260 +
ChrX	stalkie_big_nohaplotig	CDS	70955008	70955046	.	-	0	Parent=AAEL014559.1.mrna1;Target=AAEL014559.1 1 39 +
ChrX	gffcl	locus	70960610	70973191	.	+	.	ID=RLOC_00004015;geneIDs=FBgn0032192.1.path1;transcripts=FBgn0032192.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70960610	70973191	.	+	.	ID=FBgn0032192.1.mrna1;geneID=FBgn0032192.1.path1;Name=FBgn0032192.1;Dir=sensecoverage=100.0;identity=100.0;matches=762;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004015
ChrX	stalkie_big_nohaplotig	exon	70960610	70960631	100	+	.	Parent=FBgn0032192.1.mrna1;Target=FBgn0032192.1 1 22 +
ChrX	stalkie_big_nohaplotig	exon	70965495	70965663	100	+	.	Parent=FBgn0032192.1.mrna1;Target=FBgn0032192.1 23 191 +
ChrX	stalkie_big_nohaplotig	exon	70966281	70966455	100	+	.	Parent=FBgn0032192.1.mrna1;Target=FBgn0032192.1 192 366 +
ChrX	stalkie_big_nohaplotig	exon	70972796	70973191	100	+	.	Parent=FBgn0032192.1.mrna1;Target=FBgn0032192.1 367 762 +
ChrX	stalkie_big_nohaplotig	CDS	70960610	70960631	.	+	0	Parent=FBgn0032192.1.mrna1;Target=FBgn0032192.1 1 22 +
ChrX	stalkie_big_nohaplotig	CDS	70965495	70965663	.	+	2	Parent=FBgn0032192.1.mrna1;Target=FBgn0032192.1 23 191 +
ChrX	stalkie_big_nohaplotig	CDS	70966281	70966455	.	+	1	Parent=FBgn0032192.1.mrna1;Target=FBgn0032192.1 192 366 +
ChrX	stalkie_big_nohaplotig	CDS	70972796	70973191	.	+	0	Parent=FBgn0032192.1.mrna1;Target=FBgn0032192.1 367 762 +
ChrX	gffcl	locus	70994822	70996357	.	-	.	ID=RLOC_00004017;geneIDs=comp156852_c0_seq1.path1;transcripts=comp156852_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70994822	70996357	.	-	.	ID=comp156852_c0_seq1.mrna1;geneID=comp156852_c0_seq1.path1;Name=comp156852_c0_seq1;Dir=sensecoverage=100.0;identity=97.5;matches=1145;mismatches=22;indels=7;unknowns=0;Target=comp156852_c0_seq1 207 299 +;locus=RLOC_00004017
ChrX	stalkie_big_nohaplotig	exon	70994822	70995915	97	-	.	Parent=comp156852_c0_seq1.mrna1;Target=comp156852_c0_seq1 75 1173 +
ChrX	stalkie_big_nohaplotig	exon	70996284	70996357	97	-	.	Parent=comp156852_c0_seq1.mrna1;Target=comp156852_c0_seq1 1 74 +
ChrX	stalkie_big_nohaplotig	CDS	70995691	70995783	.	-	0	Parent=comp156852_c0_seq1.mrna1
ChrX	gffcl	locus	70996611	70997266	.	+	.	ID=RLOC_00004018;geneIDs=comp143276_c0_seq1.path1;transcripts=comp143276_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70996611	70997266	.	+	.	ID=comp143276_c0_seq1.mrna1;geneID=comp143276_c0_seq1.path1;Name=comp143276_c0_seq1;Dir=indeterminatecoverage=99.8;identity=95.9;matches=631;mismatches=7;indels=20;unknowns=0;Target=comp143276_c0_seq1 640 1 .;CDS_Target=comp143276_c0_seq1 537 400 .;locus=RLOC_00004018
ChrX	stalkie_big_nohaplotig	exon	70996611	70997266	95	+	.	Parent=comp143276_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	70997026	70997163	.	+	0	Parent=comp143276_c0_seq1.mrna1
ChrX	gffcl	locus	70998887	71023552	.	+	.	ID=RLOC_00004019;geneIDs=comp149956_c0_seq1.path1;transcripts=comp149956_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70998887	71023552	.	+	.	ID=comp149956_c0_seq1.mrna1;geneID=comp149956_c0_seq1.path1;Name=comp149956_c0_seq1;Dir=indeterminatecoverage=49.8;identity=91.3;matches=242;mismatches=15;indels=8;unknowns=0;locus=RLOC_00004019
ChrX	stalkie_big_nohaplotig	exon	70998887	70998901	80	+	.	Parent=comp149956_c0_seq1.mrna1;Target=comp149956_c0_seq1 274 260 .
ChrX	stalkie_big_nohaplotig	exon	71008495	71008518	62	+	.	Parent=comp149956_c0_seq1.mrna1;Target=comp149956_c0_seq1 295 275 .
ChrX	stalkie_big_nohaplotig	exon	71015065	71015069	100	+	.	Parent=comp149956_c0_seq1.mrna1;Target=comp149956_c0_seq1 300 296 .
ChrX	stalkie_big_nohaplotig	exon	71015894	71015901	100	+	.	Parent=comp149956_c0_seq1.mrna1;Target=comp149956_c0_seq1 308 301 .
ChrX	stalkie_big_nohaplotig	exon	71023340	71023552	94	+	.	Parent=comp149956_c0_seq1.mrna1;Target=comp149956_c0_seq1 516 309 .
ChrX	stalkie_big_nohaplotig	CDS	70998889	70998901	.	+	0	Parent=comp149956_c0_seq1.mrna1;Target=comp149956_c0_seq1 274 262 .
ChrX	stalkie_big_nohaplotig	CDS	71008495	71008508	.	+	2	Parent=comp149956_c0_seq1.mrna1;Target=comp149956_c0_seq1 285 275 .
ChrX	gffcl	locus	70999795	71001814	.	-	.	ID=RLOC_00004020;geneIDs=FBgn0032516.2.path1;transcripts=FBgn0032516.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	70999795	71001814	.	-	.	ID=FBgn0032516.2.mrna1;geneID=FBgn0032516.2.path1;Name=FBgn0032516.2;Dir=sensecoverage=100.0;identity=99.8;matches=904;mismatches=2;indels=0;unknowns=0;locus=RLOC_00004020
ChrX	stalkie_big_nohaplotig	exon	70999795	70999893	100	-	.	Parent=FBgn0032516.2.mrna1;Target=FBgn0032516.2 808 906 +
ChrX	stalkie_big_nohaplotig	exon	70999947	71000105	100	-	.	Parent=FBgn0032516.2.mrna1;Target=FBgn0032516.2 649 807 +
ChrX	stalkie_big_nohaplotig	exon	71000880	71001061	100	-	.	Parent=FBgn0032516.2.mrna1;Target=FBgn0032516.2 467 648 +
ChrX	stalkie_big_nohaplotig	exon	71001121	71001480	99	-	.	Parent=FBgn0032516.2.mrna1;Target=FBgn0032516.2 107 466 +
ChrX	stalkie_big_nohaplotig	exon	71001709	71001814	100	-	.	Parent=FBgn0032516.2.mrna1;Target=FBgn0032516.2 1 106 +
ChrX	stalkie_big_nohaplotig	CDS	70999795	70999893	.	-	0	Parent=FBgn0032516.2.mrna1;Target=FBgn0032516.2 808 906 +
ChrX	stalkie_big_nohaplotig	CDS	70999947	71000105	.	-	0	Parent=FBgn0032516.2.mrna1;Target=FBgn0032516.2 649 807 +
ChrX	stalkie_big_nohaplotig	CDS	71000880	71001061	.	-	2	Parent=FBgn0032516.2.mrna1;Target=FBgn0032516.2 467 648 +
ChrX	stalkie_big_nohaplotig	CDS	71001121	71001480	.	-	2	Parent=FBgn0032516.2.mrna1;Target=FBgn0032516.2 107 466 +
ChrX	stalkie_big_nohaplotig	CDS	71001709	71001814	.	-	0	Parent=FBgn0032516.2.mrna1;Target=FBgn0032516.2 1 106 +
ChrX	gffcl	locus	71008692	71009764	.	+	.	ID=RLOC_00004021;geneIDs=FBgn0004855.2.path1;transcripts=FBgn0004855.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71008692	71009764	.	+	.	ID=FBgn0004855.2.mrna1;geneID=FBgn0004855.2.path1;Name=FBgn0004855.2;Dir=sensecoverage=100.0;identity=100.0;matches=408;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004021
ChrX	stalkie_big_nohaplotig	exon	71008692	71008792	100	+	.	Parent=FBgn0004855.2.mrna1;Target=FBgn0004855.2 1 101 +
ChrX	stalkie_big_nohaplotig	exon	71008842	71008970	100	+	.	Parent=FBgn0004855.2.mrna1;Target=FBgn0004855.2 102 230 +
ChrX	stalkie_big_nohaplotig	exon	71009587	71009764	100	+	.	Parent=FBgn0004855.2.mrna1;Target=FBgn0004855.2 231 408 +
ChrX	stalkie_big_nohaplotig	CDS	71008692	71008792	.	+	0	Parent=FBgn0004855.2.mrna1;Target=FBgn0004855.2 1 101 +
ChrX	stalkie_big_nohaplotig	CDS	71008842	71008970	.	+	1	Parent=FBgn0004855.2.mrna1;Target=FBgn0004855.2 102 230 +
ChrX	stalkie_big_nohaplotig	CDS	71009587	71009764	.	+	1	Parent=FBgn0004855.2.mrna1;Target=FBgn0004855.2 231 408 +
ChrX	gffcl	locus	71013877	71016740	.	-	.	ID=RLOC_00004022;geneIDs=FBgn0036306.1.path1;transcripts=FBgn0036306.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71013877	71016740	.	-	.	ID=FBgn0036306.1.mrna1;geneID=FBgn0036306.1.path1;Name=FBgn0036306.1;Dir=sensecoverage=100.0;identity=99.2;matches=946;mismatches=8;indels=0;unknowns=0;locus=RLOC_00004022
ChrX	stalkie_big_nohaplotig	exon	71013877	71013930	100	-	.	Parent=FBgn0036306.1.mrna1;Target=FBgn0036306.1 901 954 +
ChrX	stalkie_big_nohaplotig	exon	71014840	71015048	98	-	.	Parent=FBgn0036306.1.mrna1;Target=FBgn0036306.1 692 900 +
ChrX	stalkie_big_nohaplotig	exon	71015116	71015653	99	-	.	Parent=FBgn0036306.1.mrna1;Target=FBgn0036306.1 154 691 +
ChrX	stalkie_big_nohaplotig	exon	71016531	71016605	100	-	.	Parent=FBgn0036306.1.mrna1;Target=FBgn0036306.1 79 153 +
ChrX	stalkie_big_nohaplotig	exon	71016663	71016740	98	-	.	Parent=FBgn0036306.1.mrna1;Target=FBgn0036306.1 1 78 +
ChrX	stalkie_big_nohaplotig	CDS	71013877	71013930	.	-	0	Parent=FBgn0036306.1.mrna1;Target=FBgn0036306.1 901 954 +
ChrX	stalkie_big_nohaplotig	CDS	71014840	71015048	.	-	2	Parent=FBgn0036306.1.mrna1;Target=FBgn0036306.1 692 900 +
ChrX	stalkie_big_nohaplotig	CDS	71015116	71015653	.	-	0	Parent=FBgn0036306.1.mrna1;Target=FBgn0036306.1 154 691 +
ChrX	stalkie_big_nohaplotig	CDS	71016531	71016605	.	-	0	Parent=FBgn0036306.1.mrna1;Target=FBgn0036306.1 79 153 +
ChrX	stalkie_big_nohaplotig	CDS	71016663	71016740	.	-	0	Parent=FBgn0036306.1.mrna1;Target=FBgn0036306.1 1 78 +
ChrX	gffcl	locus	71022732	71029553	.	-	.	ID=RLOC_00004023;geneIDs=FBgn0045064.1.path1;transcripts=FBgn0045064.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71022732	71029553	.	-	.	ID=FBgn0045064.1.mrna1;geneID=FBgn0045064.1.path1;Name=FBgn0045064.1;Dir=sensecoverage=100.0;identity=99.9;matches=818;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004023
ChrX	stalkie_big_nohaplotig	exon	71022732	71023047	99	-	.	Parent=FBgn0045064.1.mrna1;Target=FBgn0045064.1 504 819 +
ChrX	stalkie_big_nohaplotig	exon	71024768	71024905	100	-	.	Parent=FBgn0045064.1.mrna1;Target=FBgn0045064.1 366 503 +
ChrX	stalkie_big_nohaplotig	exon	71024972	71025228	100	-	.	Parent=FBgn0045064.1.mrna1;Target=FBgn0045064.1 109 365 +
ChrX	stalkie_big_nohaplotig	exon	71029446	71029553	100	-	.	Parent=FBgn0045064.1.mrna1;Target=FBgn0045064.1 1 108 +
ChrX	stalkie_big_nohaplotig	CDS	71022732	71023047	.	-	1	Parent=FBgn0045064.1.mrna1;Target=FBgn0045064.1 504 819 +
ChrX	stalkie_big_nohaplotig	CDS	71024768	71024905	.	-	1	Parent=FBgn0045064.1.mrna1;Target=FBgn0045064.1 366 503 +
ChrX	stalkie_big_nohaplotig	CDS	71024972	71025228	.	-	0	Parent=FBgn0045064.1.mrna1;Target=FBgn0045064.1 109 365 +
ChrX	stalkie_big_nohaplotig	CDS	71029446	71029553	.	-	0	Parent=FBgn0045064.1.mrna1;Target=FBgn0045064.1 1 108 +
ChrX	gffcl	locus	71023744	71024448	.	+	.	ID=RLOC_00004024;geneIDs=comp152801_c0_seq1.path1;transcripts=comp152801_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71023744	71024448	.	+	.	ID=comp152801_c0_seq1.mrna1;geneID=comp152801_c0_seq1.path1;Name=comp152801_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=703;mismatches=2;indels=16;unknowns=0;Target=comp152801_c0_seq1 721 1 .;CDS_Target=comp152801_c0_seq1 296 201 .;locus=RLOC_00004024
ChrX	stalkie_big_nohaplotig	exon	71023744	71024448	97	+	.	Parent=comp152801_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	71023944	71024039	.	+	0	Parent=comp152801_c0_seq1.mrna1
ChrX	gffcl	locus	71030232	71035541	.	-	.	ID=RLOC_00004025;geneIDs=comp151083_c0_seq1.path1;transcripts=comp151083_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71030232	71035541	.	-	.	ID=comp151083_c0_seq1.mrna1;geneID=comp151083_c0_seq1.path1;Name=comp151083_c0_seq1;Dir=sensecoverage=99.7;identity=98.3;matches=649;mismatches=11;indels=0;unknowns=0;Target=comp151083_c0_seq1 146 244 +;locus=RLOC_00004025
ChrX	stalkie_big_nohaplotig	exon	71030232	71030582	99	-	.	Parent=comp151083_c0_seq1.mrna1;Target=comp151083_c0_seq1 311 661 +
ChrX	stalkie_big_nohaplotig	exon	71035233	71035541	97	-	.	Parent=comp151083_c0_seq1.mrna1;Target=comp151083_c0_seq1 2 310 +
ChrX	stalkie_big_nohaplotig	CDS	71035299	71035397	.	-	0	Parent=comp151083_c0_seq1.mrna1
ChrX	gffcl	locus	71031297	71032113	.	-	.	ID=RLOC_00004026;geneIDs=comp140273_c0_seq1.path1;transcripts=comp140273_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71031297	71032113	.	-	.	ID=comp140273_c0_seq1.mrna1;geneID=comp140273_c0_seq1.path1;Name=comp140273_c0_seq1;Dir=sensecoverage=100.0;identity=96.9;matches=248;mismatches=8;indels=0;unknowns=0;locus=RLOC_00004026
ChrX	stalkie_big_nohaplotig	exon	71031297	71031528	96	-	.	Parent=comp140273_c0_seq1.mrna1;Target=comp140273_c0_seq1 25 256 +
ChrX	stalkie_big_nohaplotig	exon	71032090	71032113	100	-	.	Parent=comp140273_c0_seq1.mrna1;Target=comp140273_c0_seq1 1 24 +
ChrX	stalkie_big_nohaplotig	CDS	71031446	71031528	.	-	2	Parent=comp140273_c0_seq1.mrna1;Target=comp140273_c0_seq1 25 107 +
ChrX	stalkie_big_nohaplotig	CDS	71032090	71032111	.	-	0	Parent=comp140273_c0_seq1.mrna1;Target=comp140273_c0_seq1 3 24 +
ChrX	gffcl	locus	71031711	71032456	.	+	.	ID=RLOC_00004027;geneIDs=FBgn0032229.1.path1;transcripts=FBgn0032229.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71031711	71032456	.	+	.	ID=FBgn0032229.1.mrna1;geneID=FBgn0032229.1.path1;Name=FBgn0032229.1;Dir=sensecoverage=100.0;identity=99.8;matches=617;mismatches=0;indels=1;unknowns=0;locus=RLOC_00004027
ChrX	stalkie_big_nohaplotig	exon	71031711	71031761	100	+	.	Parent=FBgn0032229.1.mrna1;Target=FBgn0032229.1 1 51 +
ChrX	stalkie_big_nohaplotig	exon	71031837	71032280	100	+	.	Parent=FBgn0032229.1.mrna1;Target=FBgn0032229.1 52 495 +
ChrX	stalkie_big_nohaplotig	exon	71032335	71032456	99	+	.	Parent=FBgn0032229.1.mrna1;Target=FBgn0032229.1 496 618 +
ChrX	stalkie_big_nohaplotig	CDS	71031711	71031761	.	+	0	Parent=FBgn0032229.1.mrna1;Target=FBgn0032229.1 1 51 +
ChrX	stalkie_big_nohaplotig	CDS	71031837	71032280	.	+	0	Parent=FBgn0032229.1.mrna1;Target=FBgn0032229.1 52 495 +
ChrX	stalkie_big_nohaplotig	CDS	71032335	71032456	.	+	0	Parent=FBgn0032229.1.mrna1;Target=FBgn0032229.1 496 618 +
ChrX	gffcl	locus	71041194	71043266	.	+	.	ID=RLOC_00004028;geneIDs=FBgn0260750.1.path1;transcripts=FBgn0260750.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71041194	71043266	.	+	.	ID=FBgn0260750.1.mrna1;geneID=FBgn0260750.1.path1;Name=FBgn0260750.1;Dir=sensecoverage=100.0;identity=99.6;matches=1246;mismatches=5;indels=0;unknowns=0;locus=RLOC_00004028
ChrX	stalkie_big_nohaplotig	exon	71041194	71041309	100	+	.	Parent=FBgn0260750.1.mrna1;Target=FBgn0260750.1 1 116 +
ChrX	stalkie_big_nohaplotig	exon	71041363	71041486	100	+	.	Parent=FBgn0260750.1.mrna1;Target=FBgn0260750.1 117 240 +
ChrX	stalkie_big_nohaplotig	exon	71042256	71043266	99	+	.	Parent=FBgn0260750.1.mrna1;Target=FBgn0260750.1 241 1251 +
ChrX	stalkie_big_nohaplotig	CDS	71041194	71041309	.	+	0	Parent=FBgn0260750.1.mrna1;Target=FBgn0260750.1 1 116 +
ChrX	stalkie_big_nohaplotig	CDS	71041363	71041486	.	+	1	Parent=FBgn0260750.1.mrna1;Target=FBgn0260750.1 117 240 +
ChrX	stalkie_big_nohaplotig	CDS	71042256	71043266	.	+	0	Parent=FBgn0260750.1.mrna1;Target=FBgn0260750.1 241 1251 +
ChrX	gffcl	locus	71043754	71044453	.	-	.	ID=RLOC_00004029;geneIDs=comp148503_c0_seq1.path1;transcripts=comp148503_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71043754	71044453	.	-	.	ID=comp148503_c0_seq1.mrna1;geneID=comp148503_c0_seq1.path1;Name=comp148503_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=698;mismatches=0;indels=4;unknowns=0;Target=comp148503_c0_seq1 700 1 .;CDS_Target=comp148503_c0_seq1 500 339 .;locus=RLOC_00004029
ChrX	stalkie_big_nohaplotig	exon	71043754	71044453	99	-	.	Parent=comp148503_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	71043954	71044115	.	-	0	Parent=comp148503_c0_seq1.mrna1
ChrX	gffcl	locus	71055753	71057744	.	+	.	ID=RLOC_00004030;geneIDs=FBgn0032222.1.path1;transcripts=FBgn0032222.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71055753	71057744	.	+	.	ID=FBgn0032222.1.mrna1;geneID=FBgn0032222.1.path1;Name=FBgn0032222.1;Dir=sensecoverage=100.0;identity=99.9;matches=1301;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004030
ChrX	stalkie_big_nohaplotig	exon	71055753	71055836	100	+	.	Parent=FBgn0032222.1.mrna1;Target=FBgn0032222.1 1 84 +
ChrX	stalkie_big_nohaplotig	exon	71055890	71056133	100	+	.	Parent=FBgn0032222.1.mrna1;Target=FBgn0032222.1 85 328 +
ChrX	stalkie_big_nohaplotig	exon	71056185	71056871	99	+	.	Parent=FBgn0032222.1.mrna1;Target=FBgn0032222.1 329 1015 +
ChrX	stalkie_big_nohaplotig	exon	71057458	71057744	100	+	.	Parent=FBgn0032222.1.mrna1;Target=FBgn0032222.1 1016 1302 +
ChrX	stalkie_big_nohaplotig	CDS	71055753	71055836	.	+	0	Parent=FBgn0032222.1.mrna1;Target=FBgn0032222.1 1 84 +
ChrX	stalkie_big_nohaplotig	CDS	71055890	71056133	.	+	0	Parent=FBgn0032222.1.mrna1;Target=FBgn0032222.1 85 328 +
ChrX	stalkie_big_nohaplotig	CDS	71056185	71056871	.	+	2	Parent=FBgn0032222.1.mrna1;Target=FBgn0032222.1 329 1015 +
ChrX	stalkie_big_nohaplotig	CDS	71057458	71057744	.	+	2	Parent=FBgn0032222.1.mrna1;Target=FBgn0032222.1 1016 1302 +
ChrX	gffcl	locus	71060990	71073225	.	-	.	ID=RLOC_00004031;geneIDs=FBgn0051716.1.path1,comp158148_c0_seq1.path1;transcripts=FBgn0051716.1.mrna1,comp158148_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71060990	71073225	.	-	.	ID=FBgn0051716.1.mrna1;geneID=FBgn0051716.1.path1;Name=FBgn0051716.1;Dir=sensecoverage=99.8;identity=100.0;matches=3474;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004031
ChrX	stalkie_big_nohaplotig	exon	71060990	71061123	100	-	.	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 3350 3483 +
ChrX	stalkie_big_nohaplotig	exon	71061179	71061337	100	-	.	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 3191 3349 +
ChrX	stalkie_big_nohaplotig	exon	71061394	71061825	100	-	.	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 2759 3190 +
ChrX	stalkie_big_nohaplotig	exon	71062558	71062651	100	-	.	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 2665 2758 +
ChrX	stalkie_big_nohaplotig	exon	71062715	71062779	100	-	.	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 2600 2664 +
ChrX	stalkie_big_nohaplotig	exon	71062840	71062951	100	-	.	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 2488 2599 +
ChrX	stalkie_big_nohaplotig	exon	71063007	71063197	100	-	.	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 2297 2487 +
ChrX	stalkie_big_nohaplotig	exon	71063715	71063900	100	-	.	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 2111 2296 +
ChrX	stalkie_big_nohaplotig	exon	71065569	71065607	100	-	.	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 2072 2110 +
ChrX	stalkie_big_nohaplotig	exon	71066644	71066799	100	-	.	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 1916 2071 +
ChrX	stalkie_big_nohaplotig	exon	71068321	71069530	99	-	.	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 706 1915 +
ChrX	stalkie_big_nohaplotig	exon	71070591	71070809	100	-	.	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 487 705 +
ChrX	stalkie_big_nohaplotig	exon	71072555	71072641	100	-	.	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 400 486 +
ChrX	stalkie_big_nohaplotig	exon	71072718	71072867	100	-	.	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 250 399 +
ChrX	stalkie_big_nohaplotig	exon	71072925	71073038	100	-	.	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 136 249 +
ChrX	stalkie_big_nohaplotig	exon	71073099	71073225	100	-	.	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 9 135 +
ChrX	stalkie_big_nohaplotig	CDS	71060990	71061123	.	-	2	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 3350 3483 +
ChrX	stalkie_big_nohaplotig	CDS	71061179	71061337	.	-	2	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 3191 3349 +
ChrX	stalkie_big_nohaplotig	CDS	71061394	71061825	.	-	2	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 2759 3190 +
ChrX	stalkie_big_nohaplotig	CDS	71062558	71062651	.	-	0	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 2665 2758 +
ChrX	stalkie_big_nohaplotig	CDS	71062715	71062779	.	-	2	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 2600 2664 +
ChrX	stalkie_big_nohaplotig	CDS	71062840	71062951	.	-	0	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 2488 2599 +
ChrX	stalkie_big_nohaplotig	CDS	71063007	71063197	.	-	2	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 2297 2487 +
ChrX	stalkie_big_nohaplotig	CDS	71063715	71063900	.	-	2	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 2111 2296 +
ChrX	stalkie_big_nohaplotig	CDS	71065569	71065607	.	-	2	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 2072 2110 +
ChrX	stalkie_big_nohaplotig	CDS	71066644	71066799	.	-	2	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 1916 2071 +
ChrX	stalkie_big_nohaplotig	CDS	71068321	71069530	.	-	0	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 706 1915 +
ChrX	stalkie_big_nohaplotig	CDS	71070591	71070809	.	-	0	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 487 705 +
ChrX	stalkie_big_nohaplotig	CDS	71072555	71072641	.	-	0	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 400 486 +
ChrX	stalkie_big_nohaplotig	CDS	71072718	71072867	.	-	0	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 250 399 +
ChrX	stalkie_big_nohaplotig	CDS	71072925	71073038	.	-	0	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 136 249 +
ChrX	stalkie_big_nohaplotig	CDS	71073099	71073224	.	-	0	Parent=FBgn0051716.1.mrna1;Target=FBgn0051716.1 10 135 +
ChrX	stalkie_big_nohaplotig	mRNA	71065608	71066666	.	-	.	ID=comp158148_c0_seq1.mrna1;geneID=comp158148_c0_seq1.path1;Name=comp158148_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1058;mismatches=1;indels=0;unknowns=0;Target=comp158148_c0_seq1 1059 1 .;CDS_Target=comp158148_c0_seq1 593 495 .;locus=RLOC_00004031
ChrX	stalkie_big_nohaplotig	exon	71065608	71066666	99	-	.	Parent=comp158148_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	71066074	71066172	.	-	0	Parent=comp158148_c0_seq1.mrna1
ChrX	gffcl	locus	71112695	71115775	.	+	.	ID=RLOC_00004032;geneIDs=FBgn0000520.1.path1;transcripts=FBgn0000520.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71112695	71115775	.	+	.	ID=FBgn0000520.1.mrna1;geneID=FBgn0000520.1.path1;Name=FBgn0000520.1;Dir=sensecoverage=99.8;identity=99.8;matches=1232;mismatches=2;indels=0;unknowns=0;locus=RLOC_00004032
ChrX	stalkie_big_nohaplotig	exon	71112695	71112978	99	+	.	Parent=FBgn0000520.1.mrna1;Target=FBgn0000520.1 3 286 +
ChrX	stalkie_big_nohaplotig	exon	71113051	71113371	99	+	.	Parent=FBgn0000520.1.mrna1;Target=FBgn0000520.1 287 607 +
ChrX	stalkie_big_nohaplotig	exon	71114134	71114303	100	+	.	Parent=FBgn0000520.1.mrna1;Target=FBgn0000520.1 608 777 +
ChrX	stalkie_big_nohaplotig	exon	71115173	71115338	100	+	.	Parent=FBgn0000520.1.mrna1;Target=FBgn0000520.1 778 943 +
ChrX	stalkie_big_nohaplotig	exon	71115423	71115506	100	+	.	Parent=FBgn0000520.1.mrna1;Target=FBgn0000520.1 944 1027 +
ChrX	stalkie_big_nohaplotig	exon	71115567	71115775	100	+	.	Parent=FBgn0000520.1.mrna1;Target=FBgn0000520.1 1028 1236 +
ChrX	stalkie_big_nohaplotig	CDS	71112696	71112978	.	+	0	Parent=FBgn0000520.1.mrna1;Target=FBgn0000520.1 4 286 +
ChrX	stalkie_big_nohaplotig	CDS	71113051	71113371	.	+	2	Parent=FBgn0000520.1.mrna1;Target=FBgn0000520.1 287 607 +
ChrX	stalkie_big_nohaplotig	CDS	71114134	71114303	.	+	2	Parent=FBgn0000520.1.mrna1;Target=FBgn0000520.1 608 777 +
ChrX	stalkie_big_nohaplotig	CDS	71115173	71115338	.	+	0	Parent=FBgn0000520.1.mrna1;Target=FBgn0000520.1 778 943 +
ChrX	stalkie_big_nohaplotig	CDS	71115423	71115506	.	+	2	Parent=FBgn0000520.1.mrna1;Target=FBgn0000520.1 944 1027 +
ChrX	stalkie_big_nohaplotig	CDS	71115567	71115775	.	+	2	Parent=FBgn0000520.1.mrna1;Target=FBgn0000520.1 1028 1236 +
ChrX	gffcl	locus	71115970	71116841	.	-	.	ID=RLOC_00004033;geneIDs=comp129618_c0_seq1.path1;transcripts=comp129618_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71115970	71116841	.	-	.	ID=comp129618_c0_seq1.mrna1;geneID=comp129618_c0_seq1.path1;Name=comp129618_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=828;mismatches=12;indels=0;unknowns=0;Target=comp129618_c0_seq1 762 574 .;locus=RLOC_00004033
ChrX	stalkie_big_nohaplotig	exon	71115970	71116561	98	-	.	Parent=comp129618_c0_seq1.mrna1;Target=comp129618_c0_seq1 841 250 .
ChrX	stalkie_big_nohaplotig	exon	71116594	71116841	98	-	.	Parent=comp129618_c0_seq1.mrna1;Target=comp129618_c0_seq1 248 1 .
ChrX	stalkie_big_nohaplotig	CDS	71116049	71116237	.	-	0	Parent=comp129618_c0_seq1.mrna1
ChrX	gffcl	locus	71119364	71121411	.	-	.	ID=RLOC_00004034;geneIDs=comp143053_c0_seq1.path1;transcripts=comp143053_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71119364	71121411	.	-	.	ID=comp143053_c0_seq1.mrna1;geneID=comp143053_c0_seq1.path1;Name=comp143053_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.2;matches=986;mismatches=23;indels=5;unknowns=0;Target=comp143053_c0_seq1 1013 885 .;locus=RLOC_00004034
ChrX	stalkie_big_nohaplotig	exon	71119364	71120133	96	-	.	Parent=comp143053_c0_seq1.mrna1;Target=comp143053_c0_seq1 1014 240 .
ChrX	stalkie_big_nohaplotig	exon	71121173	71121411	100	-	.	Parent=comp143053_c0_seq1.mrna1;Target=comp143053_c0_seq1 239 1 .
ChrX	stalkie_big_nohaplotig	CDS	71119365	71119493	.	-	0	Parent=comp143053_c0_seq1.mrna1
ChrX	gffcl	locus	71121956	71129344	.	-	.	ID=RLOC_00004035;geneIDs=FBgn0051715.1.path1;transcripts=FBgn0051715.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71121956	71129344	.	-	.	ID=FBgn0051715.1.mrna1;geneID=FBgn0051715.1.path1;Name=FBgn0051715.1;Dir=sensecoverage=100.0;identity=99.7;matches=365;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004035
ChrX	stalkie_big_nohaplotig	exon	71121956	71122039	98	-	.	Parent=FBgn0051715.1.mrna1;Target=FBgn0051715.1 283 366 +
ChrX	stalkie_big_nohaplotig	exon	71124239	71124322	100	-	.	Parent=FBgn0051715.1.mrna1;Target=FBgn0051715.1 199 282 +
ChrX	stalkie_big_nohaplotig	exon	71127557	71127664	100	-	.	Parent=FBgn0051715.1.mrna1;Target=FBgn0051715.1 91 198 +
ChrX	stalkie_big_nohaplotig	exon	71129255	71129344	100	-	.	Parent=FBgn0051715.1.mrna1;Target=FBgn0051715.1 1 90 +
ChrX	stalkie_big_nohaplotig	CDS	71121956	71122039	.	-	0	Parent=FBgn0051715.1.mrna1;Target=FBgn0051715.1 283 366 +
ChrX	stalkie_big_nohaplotig	CDS	71124239	71124322	.	-	0	Parent=FBgn0051715.1.mrna1;Target=FBgn0051715.1 199 282 +
ChrX	stalkie_big_nohaplotig	CDS	71127557	71127664	.	-	0	Parent=FBgn0051715.1.mrna1;Target=FBgn0051715.1 91 198 +
ChrX	stalkie_big_nohaplotig	CDS	71129255	71129344	.	-	0	Parent=FBgn0051715.1.mrna1;Target=FBgn0051715.1 1 90 +
ChrX	gffcl	locus	71123287	71123831	.	-	.	ID=RLOC_00004036;geneIDs=comp157873_c1_seq1.path2;transcripts=comp157873_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	71123287	71123831	.	-	.	ID=comp157873_c1_seq1.mrna2;geneID=comp157873_c1_seq1.path2;Name=comp157873_c1_seq1;Dir=indeterminatecoverage=42.6;identity=100.0;matches=545;mismatches=0;indels=0;unknowns=0;Target=comp157873_c1_seq1 1280 736 .;CDS_Target=comp157873_c1_seq1 1192 1031 .;locus=RLOC_00004036
ChrX	stalkie_big_nohaplotig	exon	71123287	71123831	100	-	.	Parent=comp157873_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	71123375	71123536	.	-	2	Parent=comp157873_c1_seq1.mrna2
ChrX	gffcl	locus	71142224	71146204	.	-	.	ID=RLOC_00004038;geneIDs=FBgn0259482.1.path1;transcripts=FBgn0259482.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71142224	71146204	.	-	.	ID=FBgn0259482.1.mrna1;geneID=FBgn0259482.1.path1;Name=FBgn0259482.1;Dir=sensecoverage=100.0;identity=100.0;matches=687;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004038
ChrX	stalkie_big_nohaplotig	exon	71142224	71142346	100	-	.	Parent=FBgn0259482.1.mrna1;Target=FBgn0259482.1 565 687 +
ChrX	stalkie_big_nohaplotig	exon	71142555	71142670	100	-	.	Parent=FBgn0259482.1.mrna1;Target=FBgn0259482.1 449 564 +
ChrX	stalkie_big_nohaplotig	exon	71142731	71142834	100	-	.	Parent=FBgn0259482.1.mrna1;Target=FBgn0259482.1 345 448 +
ChrX	stalkie_big_nohaplotig	exon	71142885	71143008	100	-	.	Parent=FBgn0259482.1.mrna1;Target=FBgn0259482.1 221 344 +
ChrX	stalkie_big_nohaplotig	exon	71145923	71146073	100	-	.	Parent=FBgn0259482.1.mrna1;Target=FBgn0259482.1 70 220 +
ChrX	stalkie_big_nohaplotig	exon	71146136	71146204	100	-	.	Parent=FBgn0259482.1.mrna1;Target=FBgn0259482.1 1 69 +
ChrX	stalkie_big_nohaplotig	CDS	71142224	71142346	.	-	0	Parent=FBgn0259482.1.mrna1;Target=FBgn0259482.1 565 687 +
ChrX	stalkie_big_nohaplotig	CDS	71142555	71142670	.	-	2	Parent=FBgn0259482.1.mrna1;Target=FBgn0259482.1 449 564 +
ChrX	stalkie_big_nohaplotig	CDS	71142731	71142834	.	-	1	Parent=FBgn0259482.1.mrna1;Target=FBgn0259482.1 345 448 +
ChrX	stalkie_big_nohaplotig	CDS	71142885	71143008	.	-	2	Parent=FBgn0259482.1.mrna1;Target=FBgn0259482.1 221 344 +
ChrX	stalkie_big_nohaplotig	CDS	71145923	71146073	.	-	0	Parent=FBgn0259482.1.mrna1;Target=FBgn0259482.1 70 220 +
ChrX	stalkie_big_nohaplotig	CDS	71146136	71146204	.	-	0	Parent=FBgn0259482.1.mrna1;Target=FBgn0259482.1 1 69 +
ChrX	gffcl	locus	71154559	71156485	.	+	.	ID=RLOC_00004039;geneIDs=FBgn0004106.7.path1;transcripts=FBgn0004106.7.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71154559	71156485	.	+	.	ID=FBgn0004106.7.mrna1;geneID=FBgn0004106.7.path1;Name=FBgn0004106.7;Dir=sensecoverage=100.0;identity=96.9;matches=566;mismatches=18;indels=0;unknowns=13;locus=RLOC_00004039
ChrX	stalkie_big_nohaplotig	exon	71154559	71154920	94	+	.	Parent=FBgn0004106.7.mrna1;Target=FBgn0004106.7 1 362 +
ChrX	stalkie_big_nohaplotig	exon	71156251	71156485	100	+	.	Parent=FBgn0004106.7.mrna1;Target=FBgn0004106.7 363 597 +
ChrX	stalkie_big_nohaplotig	CDS	71154559	71154920	.	+	0	Parent=FBgn0004106.7.mrna1;Target=FBgn0004106.7 1 362 +
ChrX	stalkie_big_nohaplotig	CDS	71156251	71156485	.	+	1	Parent=FBgn0004106.7.mrna1;Target=FBgn0004106.7 363 597 +
ChrX	gffcl	locus	71159219	71163645	.	-	.	ID=RLOC_00004040;geneIDs=FBgn0004106.6.path1;transcripts=FBgn0004106.6.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71159219	71163645	.	-	.	ID=FBgn0004106.6.mrna1;geneID=FBgn0004106.6.path1;Name=FBgn0004106.6;Dir=sensecoverage=100.0;identity=100.0;matches=618;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004040
ChrX	stalkie_big_nohaplotig	exon	71159219	71159453	100	-	.	Parent=FBgn0004106.6.mrna1;Target=FBgn0004106.6 384 618 +
ChrX	stalkie_big_nohaplotig	exon	71163263	71163645	100	-	.	Parent=FBgn0004106.6.mrna1;Target=FBgn0004106.6 1 383 +
ChrX	stalkie_big_nohaplotig	CDS	71159219	71159453	.	-	1	Parent=FBgn0004106.6.mrna1;Target=FBgn0004106.6 384 618 +
ChrX	stalkie_big_nohaplotig	CDS	71163263	71163645	.	-	0	Parent=FBgn0004106.6.mrna1;Target=FBgn0004106.6 1 383 +
ChrX	gffcl	locus	71172708	71174001	.	-	.	ID=RLOC_00004041;geneIDs=FBgn0004106.3.path1;transcripts=FBgn0004106.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71172708	71174001	.	-	.	ID=FBgn0004106.3.mrna1;geneID=FBgn0004106.3.path1;Name=FBgn0004106.3;Dir=sensecoverage=100.0;identity=97.6;matches=770;mismatches=19;indels=0;unknowns=0;locus=RLOC_00004041
ChrX	stalkie_big_nohaplotig	exon	71172708	71172942	99	-	.	Parent=FBgn0004106.3.mrna1;Target=FBgn0004106.3 555 789 +
ChrX	stalkie_big_nohaplotig	exon	71173399	71173902	96	-	.	Parent=FBgn0004106.3.mrna1;Target=FBgn0004106.3 51 554 +
ChrX	stalkie_big_nohaplotig	exon	71173952	71174001	98	-	.	Parent=FBgn0004106.3.mrna1;Target=FBgn0004106.3 1 50 +
ChrX	stalkie_big_nohaplotig	CDS	71172708	71172942	.	-	1	Parent=FBgn0004106.3.mrna1;Target=FBgn0004106.3 555 789 +
ChrX	stalkie_big_nohaplotig	CDS	71173399	71173902	.	-	1	Parent=FBgn0004106.3.mrna1;Target=FBgn0004106.3 51 554 +
ChrX	stalkie_big_nohaplotig	CDS	71173952	71174001	.	-	0	Parent=FBgn0004106.3.mrna1;Target=FBgn0004106.3 1 50 +
ChrX	gffcl	locus	71189670	71191400	.	.	.	ID=RLOC_00004042;geneIDs=FBgn0004106.5.path1,comp137604_c0_seq1.path1;transcripts=FBgn0004106.5.mrna1,comp137604_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71189670	71191400	.	+	.	ID=FBgn0004106.5.mrna1;geneID=FBgn0004106.5.path1;Name=FBgn0004106.5;Dir=sensecoverage=100.0;identity=99.7;matches=894;mismatches=3;indels=0;unknowns=0;locus=RLOC_00004042
ChrX	stalkie_big_nohaplotig	exon	71189670	71189827	100	+	.	Parent=FBgn0004106.5.mrna1;Target=FBgn0004106.5 1 158 +
ChrX	stalkie_big_nohaplotig	exon	71189888	71190391	99	+	.	Parent=FBgn0004106.5.mrna1;Target=FBgn0004106.5 159 662 +
ChrX	stalkie_big_nohaplotig	exon	71191166	71191400	100	+	.	Parent=FBgn0004106.5.mrna1;Target=FBgn0004106.5 663 897 +
ChrX	stalkie_big_nohaplotig	CDS	71189670	71189827	.	+	0	Parent=FBgn0004106.5.mrna1;Target=FBgn0004106.5 1 158 +
ChrX	stalkie_big_nohaplotig	CDS	71189888	71190391	.	+	1	Parent=FBgn0004106.5.mrna1;Target=FBgn0004106.5 159 662 +
ChrX	stalkie_big_nohaplotig	CDS	71191166	71191400	.	+	1	Parent=FBgn0004106.5.mrna1;Target=FBgn0004106.5 663 897 +
ChrX	stalkie_big_nohaplotig	mRNA	71190372	71190865	.	-	.	ID=comp137604_c0_seq1.mrna1;geneID=comp137604_c0_seq1.path1;Name=comp137604_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=492;mismatches=2;indels=0;unknowns=0;Target=comp137604_c0_seq1 494 1 .;CDS_Target=comp137604_c0_seq1 343 197 .;locus=RLOC_00004042
ChrX	stalkie_big_nohaplotig	exon	71190372	71190865	99	-	.	Parent=comp137604_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	71190523	71190669	.	-	0	Parent=comp137604_c0_seq1.mrna1
ChrX	gffcl	locus	71255003	71257432	.	+	.	ID=RLOC_00004044;geneIDs=comp154184_c0_seq1.path1;transcripts=comp154184_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71255003	71257432	.	+	.	ID=comp154184_c0_seq1.mrna1;geneID=comp154184_c0_seq1.path1;Name=comp154184_c0_seq1;Dir=sensecoverage=99.4;identity=100.0;matches=1332;mismatches=0;indels=0;unknowns=0;Target=comp154184_c0_seq1 140 364 +;locus=RLOC_00004044
ChrX	stalkie_big_nohaplotig	exon	71255003	71255367	100	+	.	Parent=comp154184_c0_seq1.mrna1;Target=comp154184_c0_seq1 6 370 +
ChrX	stalkie_big_nohaplotig	exon	71256281	71256805	100	+	.	Parent=comp154184_c0_seq1.mrna1;Target=comp154184_c0_seq1 371 895 +
ChrX	stalkie_big_nohaplotig	exon	71256905	71257152	100	+	.	Parent=comp154184_c0_seq1.mrna1;Target=comp154184_c0_seq1 896 1143 +
ChrX	stalkie_big_nohaplotig	exon	71257239	71257432	100	+	.	Parent=comp154184_c0_seq1.mrna1;Target=comp154184_c0_seq1 1144 1337 +
ChrX	stalkie_big_nohaplotig	CDS	71255137	71255361	.	+	0	Parent=comp154184_c0_seq1.mrna1
ChrX	gffcl	locus	71258532	71284398	.	+	.	ID=RLOC_00004045;geneIDs=FBgn0039916.1.path1;transcripts=FBgn0039916.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71258532	71284398	.	+	.	ID=FBgn0039916.1.mrna1;geneID=FBgn0039916.1.path1;Name=FBgn0039916.1;Dir=sensecoverage=82.8;identity=100.0;matches=2241;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004045
ChrX	stalkie_big_nohaplotig	exon	71258532	71258637	100	+	.	Parent=FBgn0039916.1.mrna1;Target=FBgn0039916.1 1 106 +
ChrX	stalkie_big_nohaplotig	exon	71263884	71264045	100	+	.	Parent=FBgn0039916.1.mrna1;Target=FBgn0039916.1 107 268 +
ChrX	stalkie_big_nohaplotig	exon	71265895	71266146	100	+	.	Parent=FBgn0039916.1.mrna1;Target=FBgn0039916.1 269 520 +
ChrX	stalkie_big_nohaplotig	exon	71266997	71267163	100	+	.	Parent=FBgn0039916.1.mrna1;Target=FBgn0039916.1 521 687 +
ChrX	stalkie_big_nohaplotig	exon	71268318	71268548	100	+	.	Parent=FBgn0039916.1.mrna1;Target=FBgn0039916.1 688 918 +
ChrX	stalkie_big_nohaplotig	exon	71271363	71271515	100	+	.	Parent=FBgn0039916.1.mrna1;Target=FBgn0039916.1 919 1071 +
ChrX	stalkie_big_nohaplotig	exon	71276314	71276517	100	+	.	Parent=FBgn0039916.1.mrna1;Target=FBgn0039916.1 1072 1275 +
ChrX	stalkie_big_nohaplotig	exon	71279510	71279713	100	+	.	Parent=FBgn0039916.1.mrna1;Target=FBgn0039916.1 1276 1479 +
ChrX	stalkie_big_nohaplotig	exon	71282998	71283102	100	+	.	Parent=FBgn0039916.1.mrna1;Target=FBgn0039916.1 1480 1584 +
ChrX	stalkie_big_nohaplotig	exon	71283741	71284398	99	+	.	Parent=FBgn0039916.1.mrna1;Target=FBgn0039916.1 1585 2242 +
ChrX	stalkie_big_nohaplotig	CDS	71258532	71258637	.	+	0	Parent=FBgn0039916.1.mrna1;Target=FBgn0039916.1 1 106 +
ChrX	stalkie_big_nohaplotig	CDS	71263884	71264045	.	+	2	Parent=FBgn0039916.1.mrna1;Target=FBgn0039916.1 107 268 +
ChrX	stalkie_big_nohaplotig	CDS	71265895	71266146	.	+	2	Parent=FBgn0039916.1.mrna1;Target=FBgn0039916.1 269 520 +
ChrX	stalkie_big_nohaplotig	CDS	71266997	71267163	.	+	2	Parent=FBgn0039916.1.mrna1;Target=FBgn0039916.1 521 687 +
ChrX	stalkie_big_nohaplotig	CDS	71268318	71268548	.	+	0	Parent=FBgn0039916.1.mrna1;Target=FBgn0039916.1 688 918 +
ChrX	stalkie_big_nohaplotig	CDS	71271363	71271515	.	+	0	Parent=FBgn0039916.1.mrna1;Target=FBgn0039916.1 919 1071 +
ChrX	stalkie_big_nohaplotig	CDS	71276314	71276517	.	+	0	Parent=FBgn0039916.1.mrna1;Target=FBgn0039916.1 1072 1275 +
ChrX	stalkie_big_nohaplotig	CDS	71279510	71279713	.	+	0	Parent=FBgn0039916.1.mrna1;Target=FBgn0039916.1 1276 1479 +
ChrX	stalkie_big_nohaplotig	CDS	71282998	71283102	.	+	0	Parent=FBgn0039916.1.mrna1;Target=FBgn0039916.1 1480 1584 +
ChrX	stalkie_big_nohaplotig	CDS	71283741	71284398	.	+	0	Parent=FBgn0039916.1.mrna1;Target=FBgn0039916.1 1585 2242 +
ChrX	gffcl	locus	71338232	71341250	.	-	.	ID=RLOC_00004046;geneIDs=FBgn0015924.1.path1;transcripts=FBgn0015924.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71338232	71341250	.	-	.	ID=FBgn0015924.1.mrna1;geneID=FBgn0015924.1.path1;Name=FBgn0015924.1;Dir=sensecoverage=100.0;identity=100.0;matches=1482;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004046
ChrX	stalkie_big_nohaplotig	exon	71338232	71338378	100	-	.	Parent=FBgn0015924.1.mrna1;Target=FBgn0015924.1 1336 1482 +
ChrX	stalkie_big_nohaplotig	exon	71338439	71338529	100	-	.	Parent=FBgn0015924.1.mrna1;Target=FBgn0015924.1 1245 1335 +
ChrX	stalkie_big_nohaplotig	exon	71338687	71339486	100	-	.	Parent=FBgn0015924.1.mrna1;Target=FBgn0015924.1 445 1244 +
ChrX	stalkie_big_nohaplotig	exon	71339555	71339857	100	-	.	Parent=FBgn0015924.1.mrna1;Target=FBgn0015924.1 142 444 +
ChrX	stalkie_big_nohaplotig	exon	71341110	71341250	100	-	.	Parent=FBgn0015924.1.mrna1;Target=FBgn0015924.1 1 141 +
ChrX	stalkie_big_nohaplotig	CDS	71338232	71338378	.	-	0	Parent=FBgn0015924.1.mrna1;Target=FBgn0015924.1 1336 1482 +
ChrX	stalkie_big_nohaplotig	CDS	71338439	71338529	.	-	1	Parent=FBgn0015924.1.mrna1;Target=FBgn0015924.1 1245 1335 +
ChrX	stalkie_big_nohaplotig	CDS	71338687	71339486	.	-	0	Parent=FBgn0015924.1.mrna1;Target=FBgn0015924.1 445 1244 +
ChrX	stalkie_big_nohaplotig	CDS	71339555	71339857	.	-	0	Parent=FBgn0015924.1.mrna1;Target=FBgn0015924.1 142 444 +
ChrX	stalkie_big_nohaplotig	CDS	71341110	71341250	.	-	0	Parent=FBgn0015924.1.mrna1;Target=FBgn0015924.1 1 141 +
ChrX	gffcl	locus	71349603	71350282	.	-	.	ID=RLOC_00004047;geneIDs=comp148482_c0_seq1.path1;transcripts=comp148482_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71349603	71350282	.	-	.	ID=comp148482_c0_seq1.mrna1;geneID=comp148482_c0_seq1.path1;Name=comp148482_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=673;mismatches=7;indels=2;unknowns=0;Target=comp148482_c0_seq1 682 1 .;CDS_Target=comp148482_c0_seq1 663 592 .;locus=RLOC_00004047
ChrX	stalkie_big_nohaplotig	exon	71349603	71350282	98	-	.	Parent=comp148482_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	71349622	71349693	.	-	0	Parent=comp148482_c0_seq1.mrna1
ChrX	gffcl	locus	71368674	71370523	.	-	.	ID=RLOC_00004048;geneIDs=FBgn0031643.1.path1;transcripts=FBgn0031643.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71368674	71370523	.	-	.	ID=FBgn0031643.1.mrna1;geneID=FBgn0031643.1.path1;Name=FBgn0031643.1;Dir=sensecoverage=100.0;identity=99.8;matches=1730;mismatches=4;indels=0;unknowns=0;locus=RLOC_00004048
ChrX	stalkie_big_nohaplotig	exon	71368674	71368955	99	-	.	Parent=FBgn0031643.1.mrna1;Target=FBgn0031643.1 1453 1734 +
ChrX	stalkie_big_nohaplotig	exon	71369011	71369805	99	-	.	Parent=FBgn0031643.1.mrna1;Target=FBgn0031643.1 658 1452 +
ChrX	stalkie_big_nohaplotig	exon	71369867	71370523	100	-	.	Parent=FBgn0031643.1.mrna1;Target=FBgn0031643.1 1 657 +
ChrX	stalkie_big_nohaplotig	CDS	71368674	71368955	.	-	0	Parent=FBgn0031643.1.mrna1;Target=FBgn0031643.1 1453 1734 +
ChrX	stalkie_big_nohaplotig	CDS	71369011	71369805	.	-	0	Parent=FBgn0031643.1.mrna1;Target=FBgn0031643.1 658 1452 +
ChrX	stalkie_big_nohaplotig	CDS	71369867	71370523	.	-	0	Parent=FBgn0031643.1.mrna1;Target=FBgn0031643.1 1 657 +
ChrX	gffcl	locus	71372561	71373974	.	-	.	ID=RLOC_00004049;geneIDs=FBgn0004106.2.path1;transcripts=FBgn0004106.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71372561	71373974	.	-	.	ID=FBgn0004106.2.mrna1;geneID=FBgn0004106.2.path1;Name=FBgn0004106.2;Dir=sensecoverage=100.0;identity=99.1;matches=886;mismatches=8;indels=0;unknowns=0;locus=RLOC_00004049
ChrX	stalkie_big_nohaplotig	exon	71372561	71372795	97	-	.	Parent=FBgn0004106.2.mrna1;Target=FBgn0004106.2 660 894 +
ChrX	stalkie_big_nohaplotig	exon	71373265	71373768	99	-	.	Parent=FBgn0004106.2.mrna1;Target=FBgn0004106.2 156 659 +
ChrX	stalkie_big_nohaplotig	exon	71373820	71373974	100	-	.	Parent=FBgn0004106.2.mrna1;Target=FBgn0004106.2 1 155 +
ChrX	stalkie_big_nohaplotig	CDS	71372561	71372795	.	-	1	Parent=FBgn0004106.2.mrna1;Target=FBgn0004106.2 660 894 +
ChrX	stalkie_big_nohaplotig	CDS	71373265	71373768	.	-	1	Parent=FBgn0004106.2.mrna1;Target=FBgn0004106.2 156 659 +
ChrX	stalkie_big_nohaplotig	CDS	71373820	71373974	.	-	0	Parent=FBgn0004106.2.mrna1;Target=FBgn0004106.2 1 155 +
ChrX	gffcl	locus	71382691	71384902	.	+	.	ID=RLOC_00004050;geneIDs=comp150386_c0_seq1.path1;transcripts=comp150386_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71382691	71384902	.	+	.	ID=comp150386_c0_seq1.mrna1;geneID=comp150386_c0_seq1.path1;Name=comp150386_c0_seq1;Dir=antisensecoverage=93.7;identity=99.8;matches=799;mismatches=2;indels=0;unknowns=0;Target=comp150386_c0_seq1 434 676 .;locus=RLOC_00004050
ChrX	stalkie_big_nohaplotig	exon	71382691	71383342	99	+	.	Parent=comp150386_c0_seq1.mrna1;Target=comp150386_c0_seq1 151 802 -
ChrX	stalkie_big_nohaplotig	exon	71384754	71384902	100	+	.	Parent=comp150386_c0_seq1.mrna1;Target=comp150386_c0_seq1 2 150 -
ChrX	stalkie_big_nohaplotig	CDS	71382817	71383059	.	+	0	Parent=comp150386_c0_seq1.mrna1
ChrX	gffcl	locus	71389124	71431443	.	+	.	ID=RLOC_00004051;geneIDs=FBgn0031645.1.path1,comp135435_c0_seq1.path1;transcripts=FBgn0031645.1.mrna1,comp135435_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71389124	71431443	.	+	.	ID=FBgn0031645.1.mrna1;geneID=FBgn0031645.1.path1;Name=FBgn0031645.1;Dir=sensecoverage=100.0;identity=99.9;matches=1531;mismatches=2;indels=0;unknowns=0;locus=RLOC_00004051
ChrX	stalkie_big_nohaplotig	exon	71389124	71389154	100	+	.	Parent=FBgn0031645.1.mrna1;Target=FBgn0031645.1 1 31 +
ChrX	stalkie_big_nohaplotig	exon	71409225	71409266	100	+	.	Parent=FBgn0031645.1.mrna1;Target=FBgn0031645.1 32 73 +
ChrX	stalkie_big_nohaplotig	exon	71411506	71412006	99	+	.	Parent=FBgn0031645.1.mrna1;Target=FBgn0031645.1 74 574 +
ChrX	stalkie_big_nohaplotig	exon	71424537	71424623	100	+	.	Parent=FBgn0031645.1.mrna1;Target=FBgn0031645.1 575 661 +
ChrX	stalkie_big_nohaplotig	exon	71426444	71426727	100	+	.	Parent=FBgn0031645.1.mrna1;Target=FBgn0031645.1 662 945 +
ChrX	stalkie_big_nohaplotig	exon	71426800	71426932	100	+	.	Parent=FBgn0031645.1.mrna1;Target=FBgn0031645.1 946 1078 +
ChrX	stalkie_big_nohaplotig	exon	71429715	71429956	100	+	.	Parent=FBgn0031645.1.mrna1;Target=FBgn0031645.1 1079 1320 +
ChrX	stalkie_big_nohaplotig	exon	71431231	71431443	100	+	.	Parent=FBgn0031645.1.mrna1;Target=FBgn0031645.1 1321 1533 +
ChrX	stalkie_big_nohaplotig	CDS	71389124	71389154	.	+	0	Parent=FBgn0031645.1.mrna1;Target=FBgn0031645.1 1 31 +
ChrX	stalkie_big_nohaplotig	CDS	71409225	71409266	.	+	2	Parent=FBgn0031645.1.mrna1;Target=FBgn0031645.1 32 73 +
ChrX	stalkie_big_nohaplotig	CDS	71411506	71412006	.	+	2	Parent=FBgn0031645.1.mrna1;Target=FBgn0031645.1 74 574 +
ChrX	stalkie_big_nohaplotig	CDS	71424537	71424623	.	+	2	Parent=FBgn0031645.1.mrna1;Target=FBgn0031645.1 575 661 +
ChrX	stalkie_big_nohaplotig	CDS	71426444	71426727	.	+	2	Parent=FBgn0031645.1.mrna1;Target=FBgn0031645.1 662 945 +
ChrX	stalkie_big_nohaplotig	CDS	71426800	71426932	.	+	0	Parent=FBgn0031645.1.mrna1;Target=FBgn0031645.1 946 1078 +
ChrX	stalkie_big_nohaplotig	CDS	71429715	71429956	.	+	2	Parent=FBgn0031645.1.mrna1;Target=FBgn0031645.1 1079 1320 +
ChrX	stalkie_big_nohaplotig	CDS	71431231	71431443	.	+	0	Parent=FBgn0031645.1.mrna1;Target=FBgn0031645.1 1321 1533 +
ChrX	stalkie_big_nohaplotig	mRNA	71402071	71409266	.	+	.	ID=comp135435_c0_seq1.mrna1;geneID=comp135435_c0_seq1.path1;Name=comp135435_c0_seq1;Dir=antisensecoverage=99.4;identity=99.6;matches=495;mismatches=2;indels=0;unknowns=0;Target=comp135435_c0_seq1 385 498 .;locus=RLOC_00004051
ChrX	stalkie_big_nohaplotig	exon	71402071	71402525	99	+	.	Parent=comp135435_c0_seq1.mrna1;Target=comp135435_c0_seq1 46 500 -
ChrX	stalkie_big_nohaplotig	exon	71409225	71409266	97	+	.	Parent=comp135435_c0_seq1.mrna1;Target=comp135435_c0_seq1 4 45 -
ChrX	stalkie_big_nohaplotig	CDS	71402073	71402186	.	+	0	Parent=comp135435_c0_seq1.mrna1
ChrX	gffcl	locus	71427286	71428160	.	-	.	ID=RLOC_00004052;geneIDs=comp155345_c0_seq1.path1;transcripts=comp155345_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71427286	71428160	.	-	.	ID=comp155345_c0_seq1.mrna1;geneID=comp155345_c0_seq1.path1;Name=comp155345_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=870;mismatches=5;indels=0;unknowns=0;Target=comp155345_c0_seq1 875 1 .;CDS_Target=comp155345_c0_seq1 821 693 .;locus=RLOC_00004052
ChrX	stalkie_big_nohaplotig	exon	71427286	71428160	99	-	.	Parent=comp155345_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	71427340	71427468	.	-	0	Parent=comp155345_c0_seq1.mrna1
ChrX	gffcl	locus	71429151	71429559	.	-	.	ID=RLOC_00004053;geneIDs=comp142095_c0_seq1.path1;transcripts=comp142095_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71429151	71429559	.	-	.	ID=comp142095_c0_seq1.mrna1;geneID=comp142095_c0_seq1.path1;Name=comp142095_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=408;mismatches=1;indels=0;unknowns=0;Target=comp142095_c0_seq1 409 1 .;CDS_Target=comp142095_c0_seq1 359 243 .;locus=RLOC_00004053
ChrX	stalkie_big_nohaplotig	exon	71429151	71429559	99	-	.	Parent=comp142095_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	71429201	71429317	.	-	0	Parent=comp142095_c0_seq1.mrna1
ChrX	gffcl	locus	71459871	71460299	.	-	.	ID=RLOC_00004054;geneIDs=comp116287_c0_seq1.path1;transcripts=comp116287_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71459871	71460299	.	-	.	ID=comp116287_c0_seq1.mrna1;geneID=comp116287_c0_seq1.path1;Name=comp116287_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.8;matches=419;mismatches=8;indels=6;unknowns=0;Target=comp116287_c0_seq1 431 1 .;CDS_Target=comp116287_c0_seq1 111 16 .;locus=RLOC_00004054
ChrX	stalkie_big_nohaplotig	exon	71459871	71460299	96	-	.	Parent=comp116287_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	71460189	71460284	.	-	0	Parent=comp116287_c0_seq1.mrna1
ChrX	gffcl	locus	71476455	71697265	.	+	.	ID=RLOC_00004055;geneIDs=comp155777_c0_seq1.path1;transcripts=comp155777_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71476455	71697265	.	+	.	ID=comp155777_c0_seq1.mrna1;geneID=comp155777_c0_seq1.path1;Name=comp155777_c0_seq1;Dir=antisensecoverage=100.0;identity=95.6;matches=1307;mismatches=20;indels=40;unknowns=0;locus=RLOC_00004055
ChrX	stalkie_big_nohaplotig	exon	71476455	71477268	98	+	.	Parent=comp155777_c0_seq1.mrna1;Target=comp155777_c0_seq1 528 1333 -
ChrX	stalkie_big_nohaplotig	exon	71696532	71696837	87	+	.	Parent=comp155777_c0_seq1.mrna1;Target=comp155777_c0_seq1 248 527 -
ChrX	stalkie_big_nohaplotig	exon	71697025	71697265	96	+	.	Parent=comp155777_c0_seq1.mrna1;Target=comp155777_c0_seq1 1 247 -
ChrX	stalkie_big_nohaplotig	CDS	71477247	71477268	.	+	0	Parent=comp155777_c0_seq1.mrna1;Target=comp155777_c0_seq1 528 549 .
ChrX	stalkie_big_nohaplotig	CDS	71696532	71696628	.	+	2	Parent=comp155777_c0_seq1.mrna1;Target=comp155777_c0_seq1 457 527 .
ChrX	gffcl	locus	71477539	71479299	.	-	.	ID=RLOC_00004056;geneIDs=comp157020_c0_seq1.path1;transcripts=comp157020_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71477539	71479299	.	-	.	ID=comp157020_c0_seq1.mrna1;geneID=comp157020_c0_seq1.path1;Name=comp157020_c0_seq1;Dir=indeterminatecoverage=99.9;identity=90.6;matches=1596;mismatches=165;indels=1;unknowns=0;Target=comp157020_c0_seq1 1763 2 .;CDS_Target=comp157020_c0_seq1 826 818 .;locus=RLOC_00004056
ChrX	stalkie_big_nohaplotig	exon	71477539	71479299	90	-	.	Parent=comp157020_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	71478475	71478483	.	-	0	Parent=comp157020_c0_seq1.mrna1
ChrX	gffcl	locus	71489257	71489856	.	-	.	ID=RLOC_00004057;geneIDs=AAEL017299.path3;transcripts=AAEL017299.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	71489257	71489856	.	-	.	ID=AAEL017299.mrna3;geneID=AAEL017299.path3;Name=AAEL017299;Dir=indeterminatecoverage=100.0;identity=99.7;matches=598;mismatches=2;indels=0;unknowns=0;Target=AAEL017299 600 1 .;locus=RLOC_00004057
ChrX	stalkie_big_nohaplotig	exon	71489257	71489856	99	-	.	Parent=AAEL017299.mrna3
ChrX	stalkie_big_nohaplotig	CDS	71489257	71489856	.	-	0	Parent=AAEL017299.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	71825570	71826871	.	-	.	ID=comp157809_c0_seq1.mrna1;geneID=comp157809_c0_seq1.path1;Name=comp157809_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1290;mismatches=12;indels=0;unknowns=0;Target=comp157809_c0_seq1 1302 1 .;CDS_Target=comp157809_c0_seq1 485 291 .;locus=RLOC_00004059
ChrX	stalkie_big_nohaplotig	exon	71825570	71826871	99	-	.	Parent=comp157809_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	71826387	71826581	.	-	0	Parent=comp157809_c0_seq1.mrna1
ChrX	gffcl	locus	71703633	71704342	.	+	.	ID=RLOC_00004060;geneIDs=comp99697_c0_seq1.path1,comp973664_c0_seq1.path1;transcripts=comp99697_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71703856	71704342	.	+	.	ID=comp99697_c0_seq1.mrna1;geneID=comp99697_c0_seq1.path1;Name=comp99697_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=487;mismatches=0;indels=0;unknowns=0;Target=comp99697_c0_seq1 487 1 .;CDS_Target=comp99697_c0_seq1 61 2 .;locus=RLOC_00004060
ChrX	stalkie_big_nohaplotig	exon	71703856	71704342	100	+	.	Parent=comp99697_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	71703857	71703916	.	+	0	Parent=comp99697_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71800067	71806522	.	-	.	ID=FBgn0027568.1.mrna1;geneID=FBgn0027568.1.path1;Name=FBgn0027568.1;Dir=sensecoverage=99.8;identity=99.8;matches=3740;mismatches=7;indels=0;unknowns=0;locus=RLOC_00004062
ChrX	stalkie_big_nohaplotig	exon	71800067	71800188	100	-	.	Parent=FBgn0027568.1.mrna1;Target=FBgn0027568.1 3632 3753 +
ChrX	stalkie_big_nohaplotig	exon	71800263	71800409	100	-	.	Parent=FBgn0027568.1.mrna1;Target=FBgn0027568.1 3485 3631 +
ChrX	stalkie_big_nohaplotig	exon	71800480	71800723	100	-	.	Parent=FBgn0027568.1.mrna1;Target=FBgn0027568.1 3241 3484 +
ChrX	stalkie_big_nohaplotig	exon	71801022	71801999	99	-	.	Parent=FBgn0027568.1.mrna1;Target=FBgn0027568.1 2263 3240 +
ChrX	stalkie_big_nohaplotig	exon	71802065	71803435	99	-	.	Parent=FBgn0027568.1.mrna1;Target=FBgn0027568.1 892 2262 +
ChrX	stalkie_big_nohaplotig	exon	71805407	71805569	100	-	.	Parent=FBgn0027568.1.mrna1;Target=FBgn0027568.1 729 891 +
ChrX	stalkie_big_nohaplotig	exon	71805626	71805915	98	-	.	Parent=FBgn0027568.1.mrna1;Target=FBgn0027568.1 439 728 +
ChrX	stalkie_big_nohaplotig	exon	71806004	71806387	100	-	.	Parent=FBgn0027568.1.mrna1;Target=FBgn0027568.1 55 438 +
ChrX	stalkie_big_nohaplotig	exon	71806475	71806522	100	-	.	Parent=FBgn0027568.1.mrna1;Target=FBgn0027568.1 7 54 +
ChrX	stalkie_big_nohaplotig	CDS	71800067	71800188	.	-	2	Parent=FBgn0027568.1.mrna1;Target=FBgn0027568.1 3632 3753 +
ChrX	stalkie_big_nohaplotig	CDS	71800263	71800409	.	-	2	Parent=FBgn0027568.1.mrna1;Target=FBgn0027568.1 3485 3631 +
ChrX	stalkie_big_nohaplotig	CDS	71800480	71800723	.	-	0	Parent=FBgn0027568.1.mrna1;Target=FBgn0027568.1 3241 3484 +
ChrX	stalkie_big_nohaplotig	CDS	71801022	71801999	.	-	0	Parent=FBgn0027568.1.mrna1;Target=FBgn0027568.1 2263 3240 +
ChrX	stalkie_big_nohaplotig	CDS	71802065	71803435	.	-	0	Parent=FBgn0027568.1.mrna1;Target=FBgn0027568.1 892 2262 +
ChrX	stalkie_big_nohaplotig	CDS	71805407	71805569	.	-	1	Parent=FBgn0027568.1.mrna1;Target=FBgn0027568.1 729 891 +
ChrX	stalkie_big_nohaplotig	CDS	71805626	71805915	.	-	0	Parent=FBgn0027568.1.mrna1;Target=FBgn0027568.1 439 728 +
ChrX	stalkie_big_nohaplotig	CDS	71806004	71806387	.	-	0	Parent=FBgn0027568.1.mrna1;Target=FBgn0027568.1 55 438 +
ChrX	stalkie_big_nohaplotig	CDS	71806475	71806522	.	-	0	Parent=FBgn0027568.1.mrna1;Target=FBgn0027568.1 7 54 +
ChrX	stalkie_big_nohaplotig	mRNA	71841540	71842248	.	-	.	ID=comp139639_c0_seq1.mrna1;geneID=comp139639_c0_seq1.path1;Name=comp139639_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=694;mismatches=15;indels=0;unknowns=0;Target=comp139639_c0_seq1 709 1 .;CDS_Target=comp139639_c0_seq1 186 1 .;locus=RLOC_00004062
ChrX	stalkie_big_nohaplotig	exon	71841540	71842248	97	-	.	Parent=comp139639_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	71842063	71842248	.	-	0	Parent=comp139639_c0_seq1.mrna1
ChrX	gffcl	locus	71793224	71798552	.	+	.	ID=RLOC_00004063;geneIDs=FBgn0027086.1.path1;transcripts=FBgn0027086.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71793224	71798552	.	+	.	ID=FBgn0027086.1.mrna1;geneID=FBgn0027086.1.path1;Name=FBgn0027086.1;Dir=sensecoverage=100.0;identity=99.7;matches=3699;mismatches=12;indels=0;unknowns=0;locus=RLOC_00004063
ChrX	stalkie_big_nohaplotig	exon	71793224	71793426	100	+	.	Parent=FBgn0027086.1.mrna1;Target=FBgn0027086.1 1 203 +
ChrX	stalkie_big_nohaplotig	exon	71794524	71795142	99	+	.	Parent=FBgn0027086.1.mrna1;Target=FBgn0027086.1 204 822 +
ChrX	stalkie_big_nohaplotig	exon	71795207	71795839	100	+	.	Parent=FBgn0027086.1.mrna1;Target=FBgn0027086.1 823 1455 +
ChrX	stalkie_big_nohaplotig	exon	71795903	71796744	99	+	.	Parent=FBgn0027086.1.mrna1;Target=FBgn0027086.1 1456 2297 +
ChrX	stalkie_big_nohaplotig	exon	71797084	71797576	99	+	.	Parent=FBgn0027086.1.mrna1;Target=FBgn0027086.1 2298 2790 +
ChrX	stalkie_big_nohaplotig	exon	71797632	71798552	99	+	.	Parent=FBgn0027086.1.mrna1;Target=FBgn0027086.1 2791 3711 +
ChrX	stalkie_big_nohaplotig	CDS	71793224	71793426	.	+	0	Parent=FBgn0027086.1.mrna1;Target=FBgn0027086.1 1 203 +
ChrX	stalkie_big_nohaplotig	CDS	71794524	71795142	.	+	1	Parent=FBgn0027086.1.mrna1;Target=FBgn0027086.1 204 822 +
ChrX	stalkie_big_nohaplotig	CDS	71795207	71795839	.	+	0	Parent=FBgn0027086.1.mrna1;Target=FBgn0027086.1 823 1455 +
ChrX	stalkie_big_nohaplotig	CDS	71795903	71796744	.	+	0	Parent=FBgn0027086.1.mrna1;Target=FBgn0027086.1 1456 2297 +
ChrX	stalkie_big_nohaplotig	CDS	71797084	71797576	.	+	1	Parent=FBgn0027086.1.mrna1;Target=FBgn0027086.1 2298 2790 +
ChrX	stalkie_big_nohaplotig	CDS	71797632	71798552	.	+	0	Parent=FBgn0027086.1.mrna1;Target=FBgn0027086.1 2791 3711 +
ChrX	gffcl	locus	71837454	71839784	.	+	.	ID=RLOC_00004065;geneIDs=FBgn0052590.1.path1;transcripts=FBgn0052590.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71837454	71839784	.	+	.	ID=FBgn0052590.1.mrna1;geneID=FBgn0052590.1.path1;Name=FBgn0052590.1;Dir=sensecoverage=100.0;identity=99.6;matches=544;mismatches=2;indels=0;unknowns=0;locus=RLOC_00004065
ChrX	stalkie_big_nohaplotig	exon	71837454	71837505	100	+	.	Parent=FBgn0052590.1.mrna1;Target=FBgn0052590.1 1 52 +
ChrX	stalkie_big_nohaplotig	exon	71837567	71837744	100	+	.	Parent=FBgn0052590.1.mrna1;Target=FBgn0052590.1 53 230 +
ChrX	stalkie_big_nohaplotig	exon	71839469	71839784	99	+	.	Parent=FBgn0052590.1.mrna1;Target=FBgn0052590.1 231 546 +
ChrX	stalkie_big_nohaplotig	CDS	71837454	71837505	.	+	0	Parent=FBgn0052590.1.mrna1;Target=FBgn0052590.1 1 52 +
ChrX	stalkie_big_nohaplotig	CDS	71837567	71837744	.	+	2	Parent=FBgn0052590.1.mrna1;Target=FBgn0052590.1 53 230 +
ChrX	stalkie_big_nohaplotig	CDS	71839469	71839784	.	+	1	Parent=FBgn0052590.1.mrna1;Target=FBgn0052590.1 231 546 +
ChrX	gffcl	locus	71859416	71859819	.	-	.	ID=RLOC_00004067;geneIDs=comp147347_c0_seq1.path1;transcripts=comp147347_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71859416	71859819	.	-	.	ID=comp147347_c0_seq1.mrna1;geneID=comp147347_c0_seq1.path1;Name=comp147347_c0_seq1;Dir=indeterminatecoverage=95.7;identity=98.5;matches=398;mismatches=6;indels=0;unknowns=0;Target=comp147347_c0_seq1 404 1 .;CDS_Target=comp147347_c0_seq1 60 1 .;locus=RLOC_00004067
ChrX	stalkie_big_nohaplotig	exon	71859416	71859819	98	-	.	Parent=comp147347_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	71859760	71859819	.	-	0	Parent=comp147347_c0_seq1.mrna1
ChrX	gffcl	locus	71863640	71864017	.	+	.	ID=RLOC_00004068;geneIDs=comp139345_c0_seq1.path1;transcripts=comp139345_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71863640	71864017	.	+	.	ID=comp139345_c0_seq1.mrna1;geneID=comp139345_c0_seq1.path1;Name=comp139345_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=378;mismatches=0;indels=0;unknowns=0;Target=comp139345_c0_seq1 378 1 .;CDS_Target=comp139345_c0_seq1 176 3 .;locus=RLOC_00004068
ChrX	stalkie_big_nohaplotig	exon	71863640	71864017	100	+	.	Parent=comp139345_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	71863642	71863815	.	+	0	Parent=comp139345_c0_seq1.mrna1
ChrX	gffcl	locus	71866766	71867076	.	+	.	ID=RLOC_00004069;geneIDs=comp117717_c0_seq1.path1;transcripts=comp117717_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71866766	71867076	.	+	.	ID=comp117717_c0_seq1.mrna1;geneID=comp117717_c0_seq1.path1;Name=comp117717_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=308;mismatches=3;indels=0;unknowns=0;Target=comp117717_c0_seq1 311 1 .;CDS_Target=comp117717_c0_seq1 83 3 .;locus=RLOC_00004069
ChrX	stalkie_big_nohaplotig	exon	71866766	71867076	99	+	.	Parent=comp117717_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	71866768	71866848	.	+	0	Parent=comp117717_c0_seq1.mrna1
ChrX	gffcl	locus	71867422	71867918	.	+	.	ID=RLOC_00004070;geneIDs=comp135306_c0_seq1.path1;transcripts=comp135306_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71867422	71867918	.	+	.	ID=comp135306_c0_seq1.mrna1;geneID=comp135306_c0_seq1.path1;Name=comp135306_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=497;mismatches=0;indels=0;unknowns=0;Target=comp135306_c0_seq1 497 1 .;CDS_Target=comp135306_c0_seq1 402 346 .;locus=RLOC_00004070
ChrX	stalkie_big_nohaplotig	exon	71867422	71867918	100	+	.	Parent=comp135306_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	71867767	71867823	.	+	0	Parent=comp135306_c0_seq1.mrna1
ChrX	gffcl	locus	71954337	71956374	.	+	.	ID=RLOC_00004071;geneIDs=ORF428.path1;transcripts=ORF428.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71954337	71956374	.	+	.	ID=ORF428.mrna1;geneID=ORF428.path1;Name=ORF428;Dir=sensecoverage=100.0;identity=99.9;matches=1838;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004071
ChrX	stalkie_big_nohaplotig	exon	71954337	71954551	100	+	.	Parent=ORF428.mrna1;Target=ORF428 1 215 +
ChrX	stalkie_big_nohaplotig	exon	71954642	71955285	99	+	.	Parent=ORF428.mrna1;Target=ORF428 216 859 +
ChrX	stalkie_big_nohaplotig	exon	71955341	71955484	100	+	.	Parent=ORF428.mrna1;Target=ORF428 860 1003 +
ChrX	stalkie_big_nohaplotig	exon	71955539	71956374	100	+	.	Parent=ORF428.mrna1;Target=ORF428 1004 1839 +
ChrX	stalkie_big_nohaplotig	CDS	71954337	71954551	.	+	0	Parent=ORF428.mrna1;Target=ORF428 1 215 +
ChrX	stalkie_big_nohaplotig	CDS	71954642	71955285	.	+	1	Parent=ORF428.mrna1;Target=ORF428 216 859 +
ChrX	stalkie_big_nohaplotig	CDS	71955341	71955484	.	+	2	Parent=ORF428.mrna1;Target=ORF428 860 1003 +
ChrX	stalkie_big_nohaplotig	CDS	71955539	71956374	.	+	2	Parent=ORF428.mrna1;Target=ORF428 1004 1839 +
ChrX	gffcl	locus	71961679	71976957	.	-	.	ID=RLOC_00004072;geneIDs=ORF338.path1;transcripts=ORF338.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71961679	71976957	.	-	.	ID=ORF338.mrna1;geneID=ORF338.path1;Name=ORF338;Dir=sensecoverage=100.0;identity=98.2;matches=1965;mismatches=7;indels=28;unknowns=0;locus=RLOC_00004072
ChrX	stalkie_big_nohaplotig	exon	71961679	71962412	99	-	.	Parent=ORF338.mrna1;Target=ORF338 1259 1992 +
ChrX	stalkie_big_nohaplotig	exon	71962468	71962707	100	-	.	Parent=ORF338.mrna1;Target=ORF338 1019 1258 +
ChrX	stalkie_big_nohaplotig	exon	71973571	71974316	95	-	.	Parent=ORF338.mrna1;Target=ORF338 261 1018 +
ChrX	stalkie_big_nohaplotig	exon	71976044	71976273	99	-	.	Parent=ORF338.mrna1;Target=ORF338 31 260 +
ChrX	stalkie_big_nohaplotig	exon	71976928	71976957	100	-	.	Parent=ORF338.mrna1;Target=ORF338 1 30 +
ChrX	stalkie_big_nohaplotig	CDS	71961679	71962412	.	-	2	Parent=ORF338.mrna1;Target=ORF338 1259 1992 +
ChrX	stalkie_big_nohaplotig	CDS	71962468	71962707	.	-	2	Parent=ORF338.mrna1;Target=ORF338 1019 1258 +
ChrX	stalkie_big_nohaplotig	CDS	71973571	71974316	.	-	1	Parent=ORF338.mrna1;Target=ORF338 261 1018 +
ChrX	stalkie_big_nohaplotig	CDS	71976044	71976273	.	-	0	Parent=ORF338.mrna1;Target=ORF338 31 260 +
ChrX	stalkie_big_nohaplotig	CDS	71976928	71976957	.	-	0	Parent=ORF338.mrna1;Target=ORF338 1 30 +
ChrX	gffcl	locus	71986191	72632502	.	.	.	ID=RLOC_00004073;geneIDs=FBgn0260446.1.path1,comp149618_c0_seq1.path1,comp160303_c0_seq1.path1,comp163369_c2_seq1.path1;transcripts=comp163369_c2_seq1.mrna1,comp160303_c0_seq1.mrna1,FBgn0260446.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	71986191	72632502	.	+	.	ID=comp163369_c2_seq1.mrna1;geneID=comp163369_c2_seq1.path1;Name=comp163369_c2_seq1;Dir=indeterminatecoverage=62.9;identity=84.3;matches=842;mismatches=44;indels=113;unknowns=0;locus=RLOC_00004073
ChrX	stalkie_big_nohaplotig	exon	71986191	71986199	77	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 387 379 .
ChrX	stalkie_big_nohaplotig	exon	71991100	71991114	93	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 402 388 .
ChrX	stalkie_big_nohaplotig	exon	71998559	71998567	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 411 403 .
ChrX	stalkie_big_nohaplotig	exon	72000451	72000457	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 418 412 .
ChrX	stalkie_big_nohaplotig	exon	72002675	72002681	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 425 419 .
ChrX	stalkie_big_nohaplotig	exon	72003070	72003073	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 429 426 .
ChrX	stalkie_big_nohaplotig	exon	72005586	72005600	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 444 430 .
ChrX	stalkie_big_nohaplotig	exon	72008981	72008982	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 446 445 .
ChrX	stalkie_big_nohaplotig	exon	72012727	72012731	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 451 447 .
ChrX	stalkie_big_nohaplotig	exon	72017396	72017397	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 453 452 .
ChrX	stalkie_big_nohaplotig	exon	72023170	72023176	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 460 454 .
ChrX	stalkie_big_nohaplotig	exon	72023819	72023826	62	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 468 461 .
ChrX	stalkie_big_nohaplotig	exon	72036362	72036369	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 476 469 .
ChrX	stalkie_big_nohaplotig	exon	72060563	72060574	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 488 477 .
ChrX	stalkie_big_nohaplotig	exon	72067417	72067425	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 497 489 .
ChrX	stalkie_big_nohaplotig	exon	72071557	72071565	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 518 510 .
ChrX	stalkie_big_nohaplotig	exon	72071608	72071618	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 570 560 .
ChrX	stalkie_big_nohaplotig	exon	72076555	72076568	63	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 630 612 .
ChrX	stalkie_big_nohaplotig	exon	72076649	72076652	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 634 631 .
ChrX	stalkie_big_nohaplotig	exon	72083352	72083360	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 643 635 .
ChrX	stalkie_big_nohaplotig	exon	72083990	72083997	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 651 644 .
ChrX	stalkie_big_nohaplotig	exon	72098593	72098596	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 655 652 .
ChrX	stalkie_big_nohaplotig	exon	72102218	72102227	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 665 656 .
ChrX	stalkie_big_nohaplotig	exon	72107873	72107914	58	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 700 666 .
ChrX	stalkie_big_nohaplotig	exon	72113200	72113204	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 705 701 .
ChrX	stalkie_big_nohaplotig	exon	72119219	72119221	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 708 706 .
ChrX	stalkie_big_nohaplotig	exon	72127085	72127089	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 713 709 .
ChrX	stalkie_big_nohaplotig	exon	72128728	72128743	81	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 728 714 .
ChrX	stalkie_big_nohaplotig	exon	72134780	72134786	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 735 729 .
ChrX	stalkie_big_nohaplotig	exon	72140093	72140094	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 737 736 .
ChrX	stalkie_big_nohaplotig	exon	72145663	72145666	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 741 738 .
ChrX	stalkie_big_nohaplotig	exon	72152394	72152405	83	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 753 742 .
ChrX	stalkie_big_nohaplotig	exon	72156694	72156696	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 756 754 .
ChrX	stalkie_big_nohaplotig	exon	72161951	72161956	66	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 762 757 .
ChrX	stalkie_big_nohaplotig	exon	72165053	72165056	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 766 763 .
ChrX	stalkie_big_nohaplotig	exon	72179417	72179418	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 768 767 .
ChrX	stalkie_big_nohaplotig	exon	72181458	72181477	90	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 788 769 .
ChrX	stalkie_big_nohaplotig	exon	72188296	72188303	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 796 789 .
ChrX	stalkie_big_nohaplotig	exon	72190582	72190591	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 806 797 .
ChrX	stalkie_big_nohaplotig	exon	72195122	72195129	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 814 807 .
ChrX	stalkie_big_nohaplotig	exon	72203122	72203133	75	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 825 815 .
ChrX	stalkie_big_nohaplotig	exon	72203668	72203675	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 837 830 .
ChrX	stalkie_big_nohaplotig	exon	72203686	72203693	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 846 839 .
ChrX	stalkie_big_nohaplotig	exon	72204624	72204659	8	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 878 876 .
ChrX	stalkie_big_nohaplotig	exon	72218145	72218148	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 882 879 .
ChrX	stalkie_big_nohaplotig	exon	72219756	72219765	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 892 883 .
ChrX	stalkie_big_nohaplotig	exon	72226238	72226239	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 894 893 .
ChrX	stalkie_big_nohaplotig	exon	72236437	72236440	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 898 895 .
ChrX	stalkie_big_nohaplotig	exon	72239272	72239273	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 900 899 .
ChrX	stalkie_big_nohaplotig	exon	72240854	72240862	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 909 901 .
ChrX	stalkie_big_nohaplotig	exon	72243101	72243121	80	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 927 910 .
ChrX	stalkie_big_nohaplotig	exon	72245493	72245497	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 932 928 .
ChrX	stalkie_big_nohaplotig	exon	72253049	72253068	55	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 943 933 .
ChrX	stalkie_big_nohaplotig	exon	72254581	72254582	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 945 944 .
ChrX	stalkie_big_nohaplotig	exon	72262011	72262013	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 948 946 .
ChrX	stalkie_big_nohaplotig	exon	72270031	72270032	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 950 949 .
ChrX	stalkie_big_nohaplotig	exon	72272726	72272733	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 958 951 .
ChrX	stalkie_big_nohaplotig	exon	72275582	72275583	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 960 959 .
ChrX	stalkie_big_nohaplotig	exon	72297633	72297641	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 969 961 .
ChrX	stalkie_big_nohaplotig	exon	72303072	72303076	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 974 970 .
ChrX	stalkie_big_nohaplotig	exon	72305858	72305860	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 977 975 .
ChrX	stalkie_big_nohaplotig	exon	72308835	72308837	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 980 978 .
ChrX	stalkie_big_nohaplotig	exon	72318354	72318369	87	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 995 981 .
ChrX	stalkie_big_nohaplotig	exon	72321615	72321625	90	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1006 996 .
ChrX	stalkie_big_nohaplotig	exon	72323954	72323957	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1010 1007 .
ChrX	stalkie_big_nohaplotig	exon	72326810	72326811	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1012 1011 .
ChrX	stalkie_big_nohaplotig	exon	72326863	72326869	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1019 1013 .
ChrX	stalkie_big_nohaplotig	exon	72327073	72327074	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1021 1020 .
ChrX	stalkie_big_nohaplotig	exon	72327206	72327269	59	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1063 1022 .
ChrX	stalkie_big_nohaplotig	exon	72332571	72332576	83	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1069 1064 .
ChrX	stalkie_big_nohaplotig	exon	72335541	72335548	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1077 1070 .
ChrX	stalkie_big_nohaplotig	exon	72342567	72342571	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1082 1078 .
ChrX	stalkie_big_nohaplotig	exon	72345871	72345876	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1088 1083 .
ChrX	stalkie_big_nohaplotig	exon	72354033	72354066	68	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1126 1089 .
ChrX	stalkie_big_nohaplotig	exon	72359266	72359267	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1172 1171 .
ChrX	stalkie_big_nohaplotig	exon	72365065	72365071	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1179 1173 .
ChrX	stalkie_big_nohaplotig	exon	72369834	72369842	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1188 1180 .
ChrX	stalkie_big_nohaplotig	exon	72373597	72373599	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1191 1189 .
ChrX	stalkie_big_nohaplotig	exon	72379202	72379208	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1198 1192 .
ChrX	stalkie_big_nohaplotig	exon	72381080	72381086	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1205 1199 .
ChrX	stalkie_big_nohaplotig	exon	72384448	72384452	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1210 1206 .
ChrX	stalkie_big_nohaplotig	exon	72402327	72402334	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1218 1211 .
ChrX	stalkie_big_nohaplotig	exon	72403533	72403536	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1222 1219 .
ChrX	stalkie_big_nohaplotig	exon	72407515	72407524	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1232 1223 .
ChrX	stalkie_big_nohaplotig	exon	72412928	72412932	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1237 1233 .
ChrX	stalkie_big_nohaplotig	exon	72418933	72418936	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1241 1238 .
ChrX	stalkie_big_nohaplotig	exon	72421303	72421307	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1246 1242 .
ChrX	stalkie_big_nohaplotig	exon	72425089	72425095	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1253 1247 .
ChrX	stalkie_big_nohaplotig	exon	72426364	72426372	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1262 1254 .
ChrX	stalkie_big_nohaplotig	exon	72429152	72429154	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1265 1263 .
ChrX	stalkie_big_nohaplotig	exon	72440654	72440662	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1274 1266 .
ChrX	stalkie_big_nohaplotig	exon	72440931	72440941	50	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1299 1278 .
ChrX	stalkie_big_nohaplotig	exon	72460743	72460747	26	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1333 1315 .
ChrX	stalkie_big_nohaplotig	exon	72462344	72462350	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1340 1334 .
ChrX	stalkie_big_nohaplotig	exon	72463576	72463581	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1346 1341 .
ChrX	stalkie_big_nohaplotig	exon	72468263	72468273	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1357 1347 .
ChrX	stalkie_big_nohaplotig	exon	72474473	72474479	85	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1364 1358 .
ChrX	stalkie_big_nohaplotig	exon	72475812	72475815	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1368 1365 .
ChrX	stalkie_big_nohaplotig	exon	72481507	72481508	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1370 1369 .
ChrX	stalkie_big_nohaplotig	exon	72484938	72484944	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1377 1371 .
ChrX	stalkie_big_nohaplotig	exon	72499416	72499420	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1382 1378 .
ChrX	stalkie_big_nohaplotig	exon	72506040	72506044	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1387 1383 .
ChrX	stalkie_big_nohaplotig	exon	72518232	72518234	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1390 1388 .
ChrX	stalkie_big_nohaplotig	exon	72524332	72524335	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1394 1391 .
ChrX	stalkie_big_nohaplotig	exon	72526784	72526790	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1401 1395 .
ChrX	stalkie_big_nohaplotig	exon	72531144	72531148	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1406 1402 .
ChrX	stalkie_big_nohaplotig	exon	72538063	72538066	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1410 1407 .
ChrX	stalkie_big_nohaplotig	exon	72541314	72541315	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1412 1411 .
ChrX	stalkie_big_nohaplotig	exon	72566031	72566034	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1416 1413 .
ChrX	stalkie_big_nohaplotig	exon	72572005	72572013	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1425 1417 .
ChrX	stalkie_big_nohaplotig	exon	72575445	72575452	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1433 1426 .
ChrX	stalkie_big_nohaplotig	exon	72578563	72578564	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1435 1434 .
ChrX	stalkie_big_nohaplotig	exon	72582702	72582708	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1442 1436 .
ChrX	stalkie_big_nohaplotig	exon	72588962	72588970	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1451 1443 .
ChrX	stalkie_big_nohaplotig	exon	72607030	72607040	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1489 1479 .
ChrX	stalkie_big_nohaplotig	exon	72617843	72617846	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1504 1501 .
ChrX	stalkie_big_nohaplotig	exon	72624207	72624208	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1506 1505 .
ChrX	stalkie_big_nohaplotig	exon	72624981	72624982	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1508 1507 .
ChrX	stalkie_big_nohaplotig	exon	72626310	72626316	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1515 1509 .
ChrX	stalkie_big_nohaplotig	exon	72632494	72632502	100	+	.	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1524 1516 .
ChrX	stalkie_big_nohaplotig	CDS	72327218	72327269	.	+	0	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1063 1034 .
ChrX	stalkie_big_nohaplotig	CDS	72332571	72332576	.	+	2	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1069 1064 .
ChrX	stalkie_big_nohaplotig	CDS	72335541	72335548	.	+	2	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1077 1070 .
ChrX	stalkie_big_nohaplotig	CDS	72342567	72342571	.	+	0	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1082 1078 .
ChrX	stalkie_big_nohaplotig	CDS	72345871	72345876	.	+	1	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1088 1083 .
ChrX	stalkie_big_nohaplotig	CDS	72354033	72354037	.	+	1	Parent=comp163369_c2_seq1.mrna1;Target=comp163369_c2_seq1 1093 1089 .
ChrX	stalkie_big_nohaplotig	mRNA	72324072	72485636	.	+	.	ID=FBgn0260446.1.mrna1;geneID=FBgn0260446.1.path1;Name=FBgn0260446.1;Dir=sensecoverage=99.0;identity=100.0;matches=2170;mismatches=1;indels=0;unknowns=1;locus=RLOC_00004073
ChrX	stalkie_big_nohaplotig	exon	72324072	72324242	100	+	.	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 22 192 +
ChrX	stalkie_big_nohaplotig	exon	72381239	72381455	100	+	.	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 193 409 +
ChrX	stalkie_big_nohaplotig	exon	72407785	72407950	100	+	.	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 410 575 +
ChrX	stalkie_big_nohaplotig	exon	72408728	72408971	100	+	.	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 576 819 +
ChrX	stalkie_big_nohaplotig	exon	72425163	72425312	99	+	.	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 820 969 +
ChrX	stalkie_big_nohaplotig	exon	72439052	72439194	100	+	.	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 970 1112 +
ChrX	stalkie_big_nohaplotig	exon	72469891	72470014	100	+	.	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 1113 1236 +
ChrX	stalkie_big_nohaplotig	exon	72470072	72470188	100	+	.	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 1237 1353 +
ChrX	stalkie_big_nohaplotig	exon	72477507	72477714	100	+	.	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 1354 1561 +
ChrX	stalkie_big_nohaplotig	exon	72477888	72478144	100	+	.	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 1562 1818 +
ChrX	stalkie_big_nohaplotig	exon	72478613	72478750	100	+	.	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 1819 1956 +
ChrX	stalkie_big_nohaplotig	exon	72481497	72481713	100	+	.	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 1957 2173 +
ChrX	stalkie_big_nohaplotig	exon	72485617	72485636	100	+	.	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 2174 2193 +
ChrX	stalkie_big_nohaplotig	CDS	72324072	72324242	.	+	0	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 22 192 +
ChrX	stalkie_big_nohaplotig	CDS	72381239	72381455	.	+	0	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 193 409 +
ChrX	stalkie_big_nohaplotig	CDS	72407785	72407950	.	+	2	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 410 575 +
ChrX	stalkie_big_nohaplotig	CDS	72408728	72408971	.	+	1	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 576 819 +
ChrX	stalkie_big_nohaplotig	CDS	72425163	72425312	.	+	0	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 820 969 +
ChrX	stalkie_big_nohaplotig	CDS	72439052	72439194	.	+	0	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 970 1112 +
ChrX	stalkie_big_nohaplotig	CDS	72469891	72470014	.	+	1	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 1113 1236 +
ChrX	stalkie_big_nohaplotig	CDS	72470072	72470188	.	+	0	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 1237 1353 +
ChrX	stalkie_big_nohaplotig	CDS	72477507	72477714	.	+	0	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 1354 1561 +
ChrX	stalkie_big_nohaplotig	CDS	72477888	72478144	.	+	2	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 1562 1818 +
ChrX	stalkie_big_nohaplotig	CDS	72478613	72478750	.	+	0	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 1819 1956 +
ChrX	stalkie_big_nohaplotig	CDS	72481497	72481713	.	+	0	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 1957 2173 +
ChrX	stalkie_big_nohaplotig	CDS	72485617	72485636	.	+	2	Parent=FBgn0260446.1.mrna1;Target=FBgn0260446.1 2174 2193 +
ChrX	gffcl	locus	72004807	72005367	.	-	.	ID=RLOC_00004074;geneIDs=comp100221_c0_seq1.path1,comp180536_c0_seq1.path1;transcripts=comp180536_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72004807	72005142	.	-	.	ID=comp180536_c0_seq1.mrna1;geneID=comp180536_c0_seq1.path1;Name=comp180536_c0_seq1;Dir=indeterminatecoverage=96.0;identity=100.0;matches=336;mismatches=0;indels=0;unknowns=0;Target=comp180536_c0_seq1 349 14 .;CDS_Target=comp180536_c0_seq1 318 256 .;locus=RLOC_00004074
ChrX	stalkie_big_nohaplotig	exon	72004807	72005142	100	-	.	Parent=comp180536_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	72004838	72004900	.	-	0	Parent=comp180536_c0_seq1.mrna1
ChrX	gffcl	locus	72005733	72145365	.	-	.	ID=RLOC_00004075;geneIDs=FBgn0026577.1.path1,comp153137_c1_seq1.path1;transcripts=comp153137_c1_seq1.mrna1,FBgn0026577.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72005733	72145365	.	-	.	ID=comp153137_c1_seq1.mrna1;geneID=comp153137_c1_seq1.path1;Name=comp153137_c1_seq1;Dir=indeterminatecoverage=96.9;identity=98.3;matches=1402;mismatches=22;indels=2;unknowns=0;Target=comp153137_c1_seq1 999 796 .;locus=RLOC_00004075
ChrX	stalkie_big_nohaplotig	exon	72005733	72007044	98	-	.	Parent=comp153137_c1_seq1.mrna1;Target=comp153137_c1_seq1 1471 158 .
ChrX	stalkie_big_nohaplotig	exon	72015201	72015205	100	-	.	Parent=comp153137_c1_seq1.mrna1;Target=comp153137_c1_seq1 157 153 .
ChrX	stalkie_big_nohaplotig	exon	72020593	72020598	100	-	.	Parent=comp153137_c1_seq1.mrna1;Target=comp153137_c1_seq1 152 147 .
ChrX	stalkie_big_nohaplotig	exon	72026699	72026713	80	-	.	Parent=comp153137_c1_seq1.mrna1;Target=comp153137_c1_seq1 146 132 .
ChrX	stalkie_big_nohaplotig	exon	72030724	72030731	100	-	.	Parent=comp153137_c1_seq1.mrna1;Target=comp153137_c1_seq1 131 124 .
ChrX	stalkie_big_nohaplotig	exon	72036641	72036642	100	-	.	Parent=comp153137_c1_seq1.mrna1;Target=comp153137_c1_seq1 123 122 .
ChrX	stalkie_big_nohaplotig	exon	72040529	72040531	100	-	.	Parent=comp153137_c1_seq1.mrna1;Target=comp153137_c1_seq1 121 119 .
ChrX	stalkie_big_nohaplotig	exon	72050041	72050043	100	-	.	Parent=comp153137_c1_seq1.mrna1;Target=comp153137_c1_seq1 118 116 .
ChrX	stalkie_big_nohaplotig	exon	72057786	72057790	100	-	.	Parent=comp153137_c1_seq1.mrna1;Target=comp153137_c1_seq1 115 111 .
ChrX	stalkie_big_nohaplotig	exon	72060219	72060221	100	-	.	Parent=comp153137_c1_seq1.mrna1;Target=comp153137_c1_seq1 110 108 .
ChrX	stalkie_big_nohaplotig	exon	72066046	72066047	100	-	.	Parent=comp153137_c1_seq1.mrna1;Target=comp153137_c1_seq1 107 106 .
ChrX	stalkie_big_nohaplotig	exon	72073277	72073284	100	-	.	Parent=comp153137_c1_seq1.mrna1;Target=comp153137_c1_seq1 105 98 .
ChrX	stalkie_big_nohaplotig	exon	72082136	72082138	100	-	.	Parent=comp153137_c1_seq1.mrna1;Target=comp153137_c1_seq1 97 95 .
ChrX	stalkie_big_nohaplotig	exon	72094864	72094873	90	-	.	Parent=comp153137_c1_seq1.mrna1;Target=comp153137_c1_seq1 94 85 .
ChrX	stalkie_big_nohaplotig	exon	72101877	72101882	100	-	.	Parent=comp153137_c1_seq1.mrna1;Target=comp153137_c1_seq1 84 79 .
ChrX	stalkie_big_nohaplotig	exon	72117857	72117859	100	-	.	Parent=comp153137_c1_seq1.mrna1;Target=comp153137_c1_seq1 78 76 .
ChrX	stalkie_big_nohaplotig	exon	72131436	72131442	100	-	.	Parent=comp153137_c1_seq1.mrna1;Target=comp153137_c1_seq1 75 69 .
ChrX	stalkie_big_nohaplotig	exon	72136890	72136897	75	-	.	Parent=comp153137_c1_seq1.mrna1;Target=comp153137_c1_seq1 68 61 .
ChrX	stalkie_big_nohaplotig	exon	72143814	72143819	83	-	.	Parent=comp153137_c1_seq1.mrna1;Target=comp153137_c1_seq1 60 55 .
ChrX	stalkie_big_nohaplotig	exon	72145357	72145365	100	-	.	Parent=comp153137_c1_seq1.mrna1;Target=comp153137_c1_seq1 54 46 .
ChrX	stalkie_big_nohaplotig	CDS	72006205	72006408	.	-	0	Parent=comp153137_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72012817	72023564	.	-	.	ID=FBgn0026577.1.mrna1;geneID=FBgn0026577.1.path1;Name=FBgn0026577.1;Dir=sensecoverage=100.0;identity=100.0;matches=5693;mismatches=0;indels=1;unknowns=0;Target=FBgn0026577.1 3 23 +;locus=RLOC_00004075
ChrX	stalkie_big_nohaplotig	exon	72012817	72013367	100	-	.	Parent=FBgn0026577.1.mrna1;Target=FBgn0026577.1 5144 5694 +
ChrX	stalkie_big_nohaplotig	exon	72013457	72013548	100	-	.	Parent=FBgn0026577.1.mrna1;Target=FBgn0026577.1 5052 5143 +
ChrX	stalkie_big_nohaplotig	exon	72018457	72018793	100	-	.	Parent=FBgn0026577.1.mrna1;Target=FBgn0026577.1 4715 5051 +
ChrX	stalkie_big_nohaplotig	exon	72018852	72023564	99	-	.	Parent=FBgn0026577.1.mrna1;Target=FBgn0026577.1 1 4714 +
ChrX	stalkie_big_nohaplotig	CDS	72023543	72023562	.	-	0	Parent=FBgn0026577.1.mrna1
ChrX	gffcl	locus	72044049	72048893	.	-	.	ID=RLOC_00004078;geneIDs=FBgn0032811.1.path1;transcripts=FBgn0032811.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72044049	72048893	.	-	.	ID=FBgn0032811.1.mrna1;geneID=FBgn0032811.1.path1;Name=FBgn0032811.1;Dir=sensecoverage=99.8;identity=99.5;matches=569;mismatches=3;indels=0;unknowns=0;locus=RLOC_00004078
ChrX	stalkie_big_nohaplotig	exon	72044049	72044323	99	-	.	Parent=FBgn0032811.1.mrna1;Target=FBgn0032811.1 299 573 +
ChrX	stalkie_big_nohaplotig	exon	72048535	72048731	99	-	.	Parent=FBgn0032811.1.mrna1;Target=FBgn0032811.1 102 298 +
ChrX	stalkie_big_nohaplotig	exon	72048794	72048893	99	-	.	Parent=FBgn0032811.1.mrna1;Target=FBgn0032811.1 2 101 +
ChrX	stalkie_big_nohaplotig	CDS	72044049	72044323	.	-	2	Parent=FBgn0032811.1.mrna1;Target=FBgn0032811.1 299 573 +
ChrX	stalkie_big_nohaplotig	CDS	72048535	72048731	.	-	1	Parent=FBgn0032811.1.mrna1;Target=FBgn0032811.1 102 298 +
ChrX	stalkie_big_nohaplotig	CDS	72048794	72048891	.	-	0	Parent=FBgn0032811.1.mrna1;Target=FBgn0032811.1 4 101 +
ChrX	gffcl	locus	72152966	72154885	.	-	.	ID=RLOC_00004079;geneIDs=FBgn0262116.2.path1;transcripts=FBgn0262116.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72152966	72154885	.	-	.	ID=FBgn0262116.2.mrna1;geneID=FBgn0262116.2.path1;Name=FBgn0262116.2;Dir=sensecoverage=100.0;identity=99.7;matches=329;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004079
ChrX	stalkie_big_nohaplotig	exon	72152966	72153112	100	-	.	Parent=FBgn0262116.2.mrna1;Target=FBgn0262116.2 184 330 +
ChrX	stalkie_big_nohaplotig	exon	72154609	72154728	100	-	.	Parent=FBgn0262116.2.mrna1;Target=FBgn0262116.2 64 183 +
ChrX	stalkie_big_nohaplotig	exon	72154823	72154885	98	-	.	Parent=FBgn0262116.2.mrna1;Target=FBgn0262116.2 1 63 +
ChrX	stalkie_big_nohaplotig	CDS	72152966	72153112	.	-	0	Parent=FBgn0262116.2.mrna1;Target=FBgn0262116.2 184 330 +
ChrX	stalkie_big_nohaplotig	CDS	72154609	72154728	.	-	0	Parent=FBgn0262116.2.mrna1;Target=FBgn0262116.2 64 183 +
ChrX	stalkie_big_nohaplotig	CDS	72154823	72154885	.	-	0	Parent=FBgn0262116.2.mrna1;Target=FBgn0262116.2 1 63 +
ChrX	gffcl	locus	72489387	72490165	.	+	.	ID=RLOC_00004080;geneIDs=comp152034_c0_seq1.path1;transcripts=comp152034_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72489387	72490165	.	+	.	ID=comp152034_c0_seq1.mrna1;geneID=comp152034_c0_seq1.path1;Name=comp152034_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=771;mismatches=8;indels=0;unknowns=0;Target=comp152034_c0_seq1 779 1 .;CDS_Target=comp152034_c0_seq1 109 2 .;locus=RLOC_00004080
ChrX	stalkie_big_nohaplotig	exon	72489387	72490165	98	+	.	Parent=comp152034_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	72489388	72489495	.	+	0	Parent=comp152034_c0_seq1.mrna1
ChrX	gffcl	locus	72492020	72492298	.	-	.	ID=RLOC_00004081;geneIDs=comp104747_c0_seq1.path1;transcripts=comp104747_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72492020	72492298	.	-	.	ID=comp104747_c0_seq1.mrna1;geneID=comp104747_c0_seq1.path1;Name=comp104747_c0_seq1;Dir=indeterminatecoverage=84.7;identity=93.0;matches=277;mismatches=2;indels=19;unknowns=0;Target=comp104747_c0_seq1 298 1 .;CDS_Target=comp104747_c0_seq1 177 52 .;locus=RLOC_00004081
ChrX	stalkie_big_nohaplotig	exon	72492020	72492298	92	-	.	Parent=comp104747_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	72492131	72492247	.	-	0	Parent=comp104747_c0_seq1.mrna1
ChrX	gffcl	locus	72492416	72493638	.	+	.	ID=RLOC_00004082;geneIDs=comp153639_c0_seq1.path1;transcripts=comp153639_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72492416	72493638	.	+	.	ID=comp153639_c0_seq1.mrna1;geneID=comp153639_c0_seq1.path1;Name=comp153639_c0_seq1;Dir=sensecoverage=100.0;identity=98.8;matches=771;mismatches=8;indels=1;unknowns=0;Target=comp153639_c0_seq1 3 53 +;locus=RLOC_00004082
ChrX	stalkie_big_nohaplotig	exon	72492416	72492623	99	+	.	Parent=comp153639_c0_seq1.mrna1;Target=comp153639_c0_seq1 1 209 +
ChrX	stalkie_big_nohaplotig	exon	72493068	72493638	98	+	.	Parent=comp153639_c0_seq1.mrna1;Target=comp153639_c0_seq1 210 780 +
ChrX	stalkie_big_nohaplotig	CDS	72492418	72492467	.	+	0	Parent=comp153639_c0_seq1.mrna1
ChrX	gffcl	locus	72495559	72496098	.	-	.	ID=RLOC_00004083;geneIDs=FBgn0015320.4.path1;transcripts=FBgn0015320.4.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72495559	72496098	.	-	.	ID=FBgn0015320.4.mrna1;geneID=FBgn0015320.4.path1;Name=FBgn0015320.4;Dir=indeterminatecoverage=100.0;identity=99.8;matches=539;mismatches=1;indels=0;unknowns=0;Target=FBgn0015320.4 540 1 .;locus=RLOC_00004083
ChrX	stalkie_big_nohaplotig	exon	72495559	72496098	99	-	.	Parent=FBgn0015320.4.mrna1
ChrX	stalkie_big_nohaplotig	CDS	72495559	72496098	.	-	0	Parent=FBgn0015320.4.mrna1
ChrX	gffcl	locus	72500107	72500778	.	-	.	ID=RLOC_00004084;geneIDs=comp156380_c0_seq1.path1;transcripts=comp156380_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72500107	72500778	.	-	.	ID=comp156380_c0_seq1.mrna1;geneID=comp156380_c0_seq1.path1;Name=comp156380_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=658;mismatches=14;indels=0;unknowns=0;Target=comp156380_c0_seq1 672 1 .;CDS_Target=comp156380_c0_seq1 412 170 .;locus=RLOC_00004084
ChrX	stalkie_big_nohaplotig	exon	72500107	72500778	97	-	.	Parent=comp156380_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	72500367	72500609	.	-	0	Parent=comp156380_c0_seq1.mrna1
ChrX	gffcl	locus	72599550	72602685	.	-	.	ID=RLOC_00004085;geneIDs=FBgn0015320.2.path1;transcripts=FBgn0015320.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72599550	72602685	.	-	.	ID=FBgn0015320.2.mrna1;geneID=FBgn0015320.2.path1;Name=FBgn0015320.2;Dir=sensecoverage=100.0;identity=99.6;matches=693;mismatches=3;indels=0;unknowns=0;locus=RLOC_00004085
ChrX	stalkie_big_nohaplotig	exon	72599550	72600186	99	-	.	Parent=FBgn0015320.2.mrna1;Target=FBgn0015320.2 60 696 +
ChrX	stalkie_big_nohaplotig	exon	72602627	72602685	100	-	.	Parent=FBgn0015320.2.mrna1;Target=FBgn0015320.2 1 59 +
ChrX	stalkie_big_nohaplotig	CDS	72599550	72600186	.	-	1	Parent=FBgn0015320.2.mrna1;Target=FBgn0015320.2 60 696 +
ChrX	stalkie_big_nohaplotig	CDS	72602627	72602685	.	-	0	Parent=FBgn0015320.2.mrna1;Target=FBgn0015320.2 1 59 +
ChrX	gffcl	locus	72612872	72615160	.	+	.	ID=RLOC_00004086;geneIDs=comp151238_c0_seq1.path1;transcripts=comp151238_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72612872	72615160	.	+	.	ID=comp151238_c0_seq1.mrna1;geneID=comp151238_c0_seq1.path1;Name=comp151238_c0_seq1;Dir=antisensecoverage=97.9;identity=99.8;matches=858;mismatches=2;indels=0;unknowns=0;locus=RLOC_00004086
ChrX	stalkie_big_nohaplotig	exon	72612872	72613027	100	+	.	Parent=comp151238_c0_seq1.mrna1;Target=comp151238_c0_seq1 716 871 -
ChrX	stalkie_big_nohaplotig	exon	72614185	72614381	98	+	.	Parent=comp151238_c0_seq1.mrna1;Target=comp151238_c0_seq1 519 715 -
ChrX	stalkie_big_nohaplotig	exon	72614467	72614668	100	+	.	Parent=comp151238_c0_seq1.mrna1;Target=comp151238_c0_seq1 317 518 -
ChrX	stalkie_big_nohaplotig	exon	72614728	72614887	100	+	.	Parent=comp151238_c0_seq1.mrna1;Target=comp151238_c0_seq1 157 316 -
ChrX	stalkie_big_nohaplotig	exon	72615016	72615160	100	+	.	Parent=comp151238_c0_seq1.mrna1;Target=comp151238_c0_seq1 12 156 -
ChrX	stalkie_big_nohaplotig	CDS	72614223	72614381	.	+	0	Parent=comp151238_c0_seq1.mrna1;Target=comp151238_c0_seq1 519 677 .
ChrX	stalkie_big_nohaplotig	CDS	72614467	72614664	.	+	0	Parent=comp151238_c0_seq1.mrna1;Target=comp151238_c0_seq1 321 518 .
ChrX	gffcl	locus	72623226	72626423	.	-	.	ID=RLOC_00004087;geneIDs=comp157334_c0_seq1.path1;transcripts=comp157334_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72623226	72626423	.	-	.	ID=comp157334_c0_seq1.mrna1;geneID=comp157334_c0_seq1.path1;Name=comp157334_c0_seq1;Dir=sensecoverage=96.5;identity=99.4;matches=1295;mismatches=5;indels=3;unknowns=0;locus=RLOC_00004087
ChrX	stalkie_big_nohaplotig	exon	72623226	72623456	100	-	.	Parent=comp157334_c0_seq1.mrna1;Target=comp157334_c0_seq1 1077 1307 +
ChrX	stalkie_big_nohaplotig	exon	72623542	72623688	99	-	.	Parent=comp157334_c0_seq1.mrna1;Target=comp157334_c0_seq1 930 1076 +
ChrX	stalkie_big_nohaplotig	exon	72623752	72623887	100	-	.	Parent=comp157334_c0_seq1.mrna1;Target=comp157334_c0_seq1 794 929 +
ChrX	stalkie_big_nohaplotig	exon	72623941	72624173	99	-	.	Parent=comp157334_c0_seq1.mrna1;Target=comp157334_c0_seq1 561 793 +
ChrX	stalkie_big_nohaplotig	exon	72624245	72624350	100	-	.	Parent=comp157334_c0_seq1.mrna1;Target=comp157334_c0_seq1 455 560 +
ChrX	stalkie_big_nohaplotig	exon	72624671	72624736	100	-	.	Parent=comp157334_c0_seq1.mrna1;Target=comp157334_c0_seq1 389 454 +
ChrX	stalkie_big_nohaplotig	exon	72625989	72626134	100	-	.	Parent=comp157334_c0_seq1.mrna1;Target=comp157334_c0_seq1 243 388 +
ChrX	stalkie_big_nohaplotig	exon	72626189	72626423	97	-	.	Parent=comp157334_c0_seq1.mrna1;Target=comp157334_c0_seq1 5 242 +
ChrX	stalkie_big_nohaplotig	CDS	72623666	72623688	.	-	2	Parent=comp157334_c0_seq1.mrna1;Target=comp157334_c0_seq1 930 952 +
ChrX	stalkie_big_nohaplotig	CDS	72623752	72623887	.	-	0	Parent=comp157334_c0_seq1.mrna1;Target=comp157334_c0_seq1 794 929 +
ChrX	stalkie_big_nohaplotig	CDS	72623941	72624114	.	-	0	Parent=comp157334_c0_seq1.mrna1;Target=comp157334_c0_seq1 620 793 +
ChrX	gffcl	locus	72653975	72657083	.	+	.	ID=RLOC_00004088;geneIDs=comp154250_c0_seq1.path1;transcripts=comp154250_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72653975	72657083	.	+	.	ID=comp154250_c0_seq1.mrna1;geneID=comp154250_c0_seq1.path1;Name=comp154250_c0_seq1;Dir=antisensecoverage=99.2;identity=98.6;matches=954;mismatches=7;indels=7;unknowns=0;locus=RLOC_00004088
ChrX	stalkie_big_nohaplotig	exon	72653975	72654089	98	+	.	Parent=comp154250_c0_seq1.mrna1;Target=comp154250_c0_seq1 854 968 -
ChrX	stalkie_big_nohaplotig	exon	72656006	72656170	99	+	.	Parent=comp154250_c0_seq1.mrna1;Target=comp154250_c0_seq1 689 853 -
ChrX	stalkie_big_nohaplotig	exon	72656226	72656307	100	+	.	Parent=comp154250_c0_seq1.mrna1;Target=comp154250_c0_seq1 607 688 -
ChrX	stalkie_big_nohaplotig	exon	72656374	72656434	100	+	.	Parent=comp154250_c0_seq1.mrna1;Target=comp154250_c0_seq1 546 606 -
ChrX	stalkie_big_nohaplotig	exon	72656485	72656550	100	+	.	Parent=comp154250_c0_seq1.mrna1;Target=comp154250_c0_seq1 480 545 -
ChrX	stalkie_big_nohaplotig	exon	72656612	72657083	97	+	.	Parent=comp154250_c0_seq1.mrna1;Target=comp154250_c0_seq1 1 479 -
ChrX	stalkie_big_nohaplotig	CDS	72656006	72656170	.	+	0	Parent=comp154250_c0_seq1.mrna1;Target=comp154250_c0_seq1 689 853 .
ChrX	stalkie_big_nohaplotig	CDS	72656226	72656307	.	+	0	Parent=comp154250_c0_seq1.mrna1;Target=comp154250_c0_seq1 607 688 .
ChrX	stalkie_big_nohaplotig	CDS	72656374	72656405	.	+	2	Parent=comp154250_c0_seq1.mrna1;Target=comp154250_c0_seq1 575 606 .
ChrX	gffcl	locus	72686760	72687514	.	-	.	ID=RLOC_00004090;geneIDs=comp67400_c1_seq1.path1;transcripts=comp67400_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72686760	72687514	.	-	.	ID=comp67400_c1_seq1.mrna1;geneID=comp67400_c1_seq1.path1;Name=comp67400_c1_seq1;Dir=indeterminatecoverage=97.7;identity=100.0;matches=755;mismatches=0;indels=0;unknowns=0;Target=comp67400_c1_seq1 755 1 .;CDS_Target=comp67400_c1_seq1 134 3 .;locus=RLOC_00004090
ChrX	stalkie_big_nohaplotig	exon	72686760	72687514	100	-	.	Parent=comp67400_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	72687381	72687512	.	-	0	Parent=comp67400_c1_seq1.mrna1
ChrX	gffcl	locus	72687676	72688188	.	+	.	ID=RLOC_00004091;geneIDs=comp136847_c0_seq1.path1;transcripts=comp136847_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72687676	72688188	.	+	.	ID=comp136847_c0_seq1.mrna1;geneID=comp136847_c0_seq1.path1;Name=comp136847_c0_seq1;Dir=indeterminatecoverage=99.0;identity=94.3;matches=484;mismatches=24;indels=5;unknowns=0;Target=comp136847_c0_seq1 513 6 .;CDS_Target=comp136847_c0_seq1 116 6 .;locus=RLOC_00004091
ChrX	stalkie_big_nohaplotig	exon	72687676	72688188	94	+	.	Parent=comp136847_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	72687676	72687786	.	+	0	Parent=comp136847_c0_seq1.mrna1
ChrX	gffcl	locus	72690363	72694118	.	-	.	ID=RLOC_00004092;geneIDs=FBgn0001977.1.path1;transcripts=FBgn0001977.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72690363	72694118	.	-	.	ID=FBgn0001977.1.mrna1;geneID=FBgn0001977.1.path1;Name=FBgn0001977.1;Dir=sensecoverage=100.0;identity=99.6;matches=816;mismatches=3;indels=0;unknowns=0;locus=RLOC_00004092
ChrX	stalkie_big_nohaplotig	exon	72690363	72690473	100	-	.	Parent=FBgn0001977.1.mrna1;Target=FBgn0001977.1 709 819 +
ChrX	stalkie_big_nohaplotig	exon	72690576	72690700	98	-	.	Parent=FBgn0001977.1.mrna1;Target=FBgn0001977.1 584 708 +
ChrX	stalkie_big_nohaplotig	exon	72693455	72693832	99	-	.	Parent=FBgn0001977.1.mrna1;Target=FBgn0001977.1 206 583 +
ChrX	stalkie_big_nohaplotig	exon	72693914	72694118	100	-	.	Parent=FBgn0001977.1.mrna1;Target=FBgn0001977.1 1 205 +
ChrX	stalkie_big_nohaplotig	CDS	72690363	72690473	.	-	0	Parent=FBgn0001977.1.mrna1;Target=FBgn0001977.1 709 819 +
ChrX	stalkie_big_nohaplotig	CDS	72690576	72690700	.	-	2	Parent=FBgn0001977.1.mrna1;Target=FBgn0001977.1 584 708 +
ChrX	stalkie_big_nohaplotig	CDS	72693455	72693832	.	-	2	Parent=FBgn0001977.1.mrna1;Target=FBgn0001977.1 206 583 +
ChrX	stalkie_big_nohaplotig	CDS	72693914	72694118	.	-	0	Parent=FBgn0001977.1.mrna1;Target=FBgn0001977.1 1 205 +
ChrX	gffcl	locus	72698982	72699478	.	-	.	ID=RLOC_00004093;geneIDs=FBgn0032987.1.path1;transcripts=FBgn0032987.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72698982	72699478	.	-	.	ID=FBgn0032987.1.mrna1;geneID=FBgn0032987.1.path1;Name=FBgn0032987.1;Dir=indeterminatecoverage=99.2;identity=100.0;matches=497;mismatches=0;indels=0;unknowns=0;Target=FBgn0032987.1 501 5 .;CDS_Target=FBgn0032987.1 501 7 .;locus=RLOC_00004093
ChrX	stalkie_big_nohaplotig	exon	72698982	72699478	100	-	.	Parent=FBgn0032987.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	72698982	72699476	.	-	0	Parent=FBgn0032987.1.mrna1
ChrX	gffcl	locus	72701137	72702164	.	-	.	ID=RLOC_00004094;geneIDs=FBgn0032986.1.path1;transcripts=FBgn0032986.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72701137	72702164	.	-	.	ID=FBgn0032986.1.mrna1;geneID=FBgn0032986.1.path1;Name=FBgn0032986.1;Dir=sensecoverage=100.0;identity=99.8;matches=898;mismatches=2;indels=0;unknowns=0;locus=RLOC_00004094
ChrX	stalkie_big_nohaplotig	exon	72701137	72701840	99	-	.	Parent=FBgn0032986.1.mrna1;Target=FBgn0032986.1 197 900 +
ChrX	stalkie_big_nohaplotig	exon	72701917	72702058	100	-	.	Parent=FBgn0032986.1.mrna1;Target=FBgn0032986.1 55 196 +
ChrX	stalkie_big_nohaplotig	exon	72702111	72702164	100	-	.	Parent=FBgn0032986.1.mrna1;Target=FBgn0032986.1 1 54 +
ChrX	stalkie_big_nohaplotig	CDS	72701137	72701840	.	-	2	Parent=FBgn0032986.1.mrna1;Target=FBgn0032986.1 197 900 +
ChrX	stalkie_big_nohaplotig	CDS	72701917	72702058	.	-	0	Parent=FBgn0032986.1.mrna1;Target=FBgn0032986.1 55 196 +
ChrX	stalkie_big_nohaplotig	CDS	72702111	72702164	.	-	0	Parent=FBgn0032986.1.mrna1;Target=FBgn0032986.1 1 54 +
ChrX	gffcl	locus	72704601	72706149	.	-	.	ID=RLOC_00004095;geneIDs=FBgn0037504.1.path1;transcripts=FBgn0037504.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72704601	72706149	.	-	.	ID=FBgn0037504.1.mrna1;geneID=FBgn0037504.1.path1;Name=FBgn0037504.1;Dir=sensecoverage=100.0;identity=98.9;matches=908;mismatches=10;indels=0;unknowns=0;locus=RLOC_00004095
ChrX	stalkie_big_nohaplotig	exon	72704601	72704807	98	-	.	Parent=FBgn0037504.1.mrna1;Target=FBgn0037504.1 712 918 +
ChrX	stalkie_big_nohaplotig	exon	72704870	72705034	99	-	.	Parent=FBgn0037504.1.mrna1;Target=FBgn0037504.1 547 711 +
ChrX	stalkie_big_nohaplotig	exon	72705550	72705887	99	-	.	Parent=FBgn0037504.1.mrna1;Target=FBgn0037504.1 209 546 +
ChrX	stalkie_big_nohaplotig	exon	72705942	72706149	97	-	.	Parent=FBgn0037504.1.mrna1;Target=FBgn0037504.1 1 208 +
ChrX	stalkie_big_nohaplotig	CDS	72704601	72704807	.	-	0	Parent=FBgn0037504.1.mrna1;Target=FBgn0037504.1 712 918 +
ChrX	stalkie_big_nohaplotig	CDS	72704870	72705034	.	-	0	Parent=FBgn0037504.1.mrna1;Target=FBgn0037504.1 547 711 +
ChrX	stalkie_big_nohaplotig	CDS	72705550	72705887	.	-	2	Parent=FBgn0037504.1.mrna1;Target=FBgn0037504.1 209 546 +
ChrX	stalkie_big_nohaplotig	CDS	72705942	72706149	.	-	0	Parent=FBgn0037504.1.mrna1;Target=FBgn0037504.1 1 208 +
ChrX	gffcl	locus	72708174	72714829	.	+	.	ID=RLOC_00004096;geneIDs=FBgn0032988.1.path1;transcripts=FBgn0032988.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72708174	72714829	.	+	.	ID=FBgn0032988.1.mrna1;geneID=FBgn0032988.1.path1;Name=FBgn0032988.1;Dir=sensecoverage=99.9;identity=99.7;matches=1898;mismatches=5;indels=0;unknowns=0;locus=RLOC_00004096
ChrX	stalkie_big_nohaplotig	exon	72708174	72708438	99	+	.	Parent=FBgn0032988.1.mrna1;Target=FBgn0032988.1 3 267 +
ChrX	stalkie_big_nohaplotig	exon	72708504	72708985	99	+	.	Parent=FBgn0032988.1.mrna1;Target=FBgn0032988.1 268 749 +
ChrX	stalkie_big_nohaplotig	exon	72709041	72709147	100	+	.	Parent=FBgn0032988.1.mrna1;Target=FBgn0032988.1 750 856 +
ChrX	stalkie_big_nohaplotig	exon	72711099	72711349	99	+	.	Parent=FBgn0032988.1.mrna1;Target=FBgn0032988.1 857 1107 +
ChrX	stalkie_big_nohaplotig	exon	72711440	72711573	100	+	.	Parent=FBgn0032988.1.mrna1;Target=FBgn0032988.1 1108 1241 +
ChrX	stalkie_big_nohaplotig	exon	72711632	72711801	100	+	.	Parent=FBgn0032988.1.mrna1;Target=FBgn0032988.1 1242 1411 +
ChrX	stalkie_big_nohaplotig	exon	72711881	72712130	100	+	.	Parent=FBgn0032988.1.mrna1;Target=FBgn0032988.1 1412 1661 +
ChrX	stalkie_big_nohaplotig	exon	72714586	72714829	99	+	.	Parent=FBgn0032988.1.mrna1;Target=FBgn0032988.1 1662 1905 +
ChrX	stalkie_big_nohaplotig	CDS	72708175	72708438	.	+	0	Parent=FBgn0032988.1.mrna1;Target=FBgn0032988.1 4 267 +
ChrX	stalkie_big_nohaplotig	CDS	72708504	72708985	.	+	0	Parent=FBgn0032988.1.mrna1;Target=FBgn0032988.1 268 749 +
ChrX	stalkie_big_nohaplotig	CDS	72709041	72709147	.	+	1	Parent=FBgn0032988.1.mrna1;Target=FBgn0032988.1 750 856 +
ChrX	stalkie_big_nohaplotig	CDS	72711099	72711349	.	+	2	Parent=FBgn0032988.1.mrna1;Target=FBgn0032988.1 857 1107 +
ChrX	stalkie_big_nohaplotig	CDS	72711440	72711573	.	+	0	Parent=FBgn0032988.1.mrna1;Target=FBgn0032988.1 1108 1241 +
ChrX	stalkie_big_nohaplotig	CDS	72711632	72711801	.	+	1	Parent=FBgn0032988.1.mrna1;Target=FBgn0032988.1 1242 1411 +
ChrX	stalkie_big_nohaplotig	CDS	72711881	72712130	.	+	2	Parent=FBgn0032988.1.mrna1;Target=FBgn0032988.1 1412 1661 +
ChrX	stalkie_big_nohaplotig	CDS	72714586	72714829	.	+	1	Parent=FBgn0032988.1.mrna1;Target=FBgn0032988.1 1662 1905 +
ChrX	gffcl	locus	72710544	72710605	.	+	.	ID=RLOC_00004097;geneIDs=comp153396_c0_seq1.path1;transcripts=comp153396_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72710544	72710605	.	+	.	ID=comp153396_c0_seq1.mrna1;geneID=comp153396_c0_seq1.path1;Name=comp153396_c0_seq1;Dir=indeterminatecoverage=9.8;identity=91.9;matches=57;mismatches=5;indels=0;unknowns=0;Target=comp153396_c0_seq1 64 3 .;locus=RLOC_00004097
ChrX	stalkie_big_nohaplotig	exon	72710544	72710605	91	+	.	Parent=comp153396_c0_seq1.mrna1
ChrX	gffcl	locus	72713524	72714419	.	+	.	ID=RLOC_00004098;geneIDs=comp149582_c0_seq1.path1;transcripts=comp149582_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72713524	72714419	.	+	.	ID=comp149582_c0_seq1.mrna1;geneID=comp149582_c0_seq1.path1;Name=comp149582_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.9;matches=890;mismatches=6;indels=13;unknowns=0;Target=comp149582_c0_seq1 909 1 .;CDS_Target=comp149582_c0_seq1 542 180 .;locus=RLOC_00004098
ChrX	stalkie_big_nohaplotig	exon	72713524	72714419	97	+	.	Parent=comp149582_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	72713703	72714052	.	+	0	Parent=comp149582_c0_seq1.mrna1
ChrX	gffcl	locus	72752208	72752410	.	+	.	ID=RLOC_00004099;geneIDs=comp118886_c0_seq1.path1;transcripts=comp118886_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72752208	72752410	.	+	.	ID=comp118886_c0_seq1.mrna1;geneID=comp118886_c0_seq1.path1;Name=comp118886_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=203;mismatches=0;indels=0;unknowns=0;Target=comp118886_c0_seq1 203 1 .;CDS_Target=comp118886_c0_seq1 125 3 .;locus=RLOC_00004099
ChrX	stalkie_big_nohaplotig	exon	72752208	72752410	100	+	.	Parent=comp118886_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	72752210	72752332	.	+	0	Parent=comp118886_c0_seq1.mrna1
ChrX	gffcl	locus	72752414	72753154	.	+	.	ID=RLOC_00004100;geneIDs=comp115199_c0_seq1.path1;transcripts=comp115199_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72752414	72753154	.	+	.	ID=comp115199_c0_seq1.mrna1;geneID=comp115199_c0_seq1.path1;Name=comp115199_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.7;matches=739;mismatches=2;indels=0;unknowns=0;Target=comp115199_c0_seq1 742 2 .;CDS_Target=comp115199_c0_seq1 532 434 .;locus=RLOC_00004100
ChrX	stalkie_big_nohaplotig	exon	72752414	72753154	99	+	.	Parent=comp115199_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	72752846	72752944	.	+	0	Parent=comp115199_c0_seq1.mrna1
ChrX	gffcl	locus	72765826	72766654	.	-	.	ID=RLOC_00004101;geneIDs=comp538537_c0_seq1.path1;transcripts=comp538537_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72765826	72766654	.	-	.	ID=comp538537_c0_seq1.mrna1;geneID=comp538537_c0_seq1.path1;Name=comp538537_c0_seq1;Dir=indeterminatecoverage=98.1;identity=100.0;matches=829;mismatches=0;indels=0;unknowns=0;Target=comp538537_c0_seq1 845 17 .;CDS_Target=comp538537_c0_seq1 222 124 .;locus=RLOC_00004101
ChrX	stalkie_big_nohaplotig	exon	72765826	72766654	100	-	.	Parent=comp538537_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	72766449	72766547	.	-	0	Parent=comp538537_c0_seq1.mrna1
ChrX	gffcl	locus	72786028	72786480	.	+	.	ID=RLOC_00004102;geneIDs=FBgn0011217.3.path1;transcripts=FBgn0011217.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72786028	72786480	.	+	.	ID=FBgn0011217.3.mrna1;geneID=FBgn0011217.3.path1;Name=FBgn0011217.3;Dir=indeterminatecoverage=100.0;identity=100.0;matches=453;mismatches=0;indels=0;unknowns=0;Target=FBgn0011217.3 453 1 .;locus=RLOC_00004102
ChrX	stalkie_big_nohaplotig	exon	72786028	72786480	100	+	.	Parent=FBgn0011217.3.mrna1
ChrX	stalkie_big_nohaplotig	CDS	72786028	72786480	.	+	0	Parent=FBgn0011217.3.mrna1
ChrX	gffcl	locus	72787926	72788521	.	-	.	ID=RLOC_00004103;geneIDs=comp119308_c0_seq1.path1;transcripts=comp119308_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72787926	72788521	.	-	.	ID=comp119308_c0_seq1.mrna1;geneID=comp119308_c0_seq1.path1;Name=comp119308_c0_seq1;Dir=indeterminatecoverage=77.0;identity=97.8;matches=583;mismatches=12;indels=1;unknowns=0;Target=comp119308_c0_seq1 595 1 .;CDS_Target=comp119308_c0_seq1 108 1 .;locus=RLOC_00004103
ChrX	stalkie_big_nohaplotig	exon	72787926	72788521	97	-	.	Parent=comp119308_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	72788414	72788521	.	-	0	Parent=comp119308_c0_seq1.mrna1
ChrX	gffcl	locus	72805712	72806602	.	-	.	ID=RLOC_00004104;geneIDs=comp159399_c0_seq1.path1;transcripts=comp159399_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72805712	72806602	.	-	.	ID=comp159399_c0_seq1.mrna1;geneID=comp159399_c0_seq1.path1;Name=comp159399_c0_seq1;Dir=sensecoverage=74.8;identity=98.6;matches=639;mismatches=8;indels=1;unknowns=0;Target=comp159399_c0_seq1 219 500 +;locus=RLOC_00004104
ChrX	stalkie_big_nohaplotig	exon	72805712	72805850	99	-	.	Parent=comp159399_c0_seq1.mrna1;Target=comp159399_c0_seq1 726 865 +
ChrX	stalkie_big_nohaplotig	exon	72805913	72806039	97	-	.	Parent=comp159399_c0_seq1.mrna1;Target=comp159399_c0_seq1 599 725 +
ChrX	stalkie_big_nohaplotig	exon	72806222	72806602	98	-	.	Parent=comp159399_c0_seq1.mrna1;Target=comp159399_c0_seq1 218 598 +
ChrX	stalkie_big_nohaplotig	CDS	72806320	72806601	.	-	0	Parent=comp159399_c0_seq1.mrna1
ChrX	gffcl	locus	72843629	72849286	.	+	.	ID=RLOC_00004105;geneIDs=FBgn0261387.2.path1;transcripts=FBgn0261387.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72843629	72849286	.	+	.	ID=FBgn0261387.2.mrna1;geneID=FBgn0261387.2.path1;Name=FBgn0261387.2;Dir=sensecoverage=100.0;identity=99.5;matches=1561;mismatches=5;indels=3;unknowns=0;locus=RLOC_00004105
ChrX	stalkie_big_nohaplotig	exon	72843629	72843691	95	+	.	Parent=FBgn0261387.2.mrna1;Target=FBgn0261387.2 1 60 +
ChrX	stalkie_big_nohaplotig	exon	72843760	72844050	99	+	.	Parent=FBgn0261387.2.mrna1;Target=FBgn0261387.2 61 351 +
ChrX	stalkie_big_nohaplotig	exon	72844124	72844787	99	+	.	Parent=FBgn0261387.2.mrna1;Target=FBgn0261387.2 352 1015 +
ChrX	stalkie_big_nohaplotig	exon	72846457	72846602	100	+	.	Parent=FBgn0261387.2.mrna1;Target=FBgn0261387.2 1016 1161 +
ChrX	stalkie_big_nohaplotig	exon	72848146	72848295	99	+	.	Parent=FBgn0261387.2.mrna1;Target=FBgn0261387.2 1162 1311 +
ChrX	stalkie_big_nohaplotig	exon	72849032	72849286	100	+	.	Parent=FBgn0261387.2.mrna1;Target=FBgn0261387.2 1312 1566 +
ChrX	stalkie_big_nohaplotig	CDS	72843907	72844050	.	+	0	Parent=FBgn0261387.2.mrna1;Target=FBgn0261387.2 208 351 +
ChrX	stalkie_big_nohaplotig	CDS	72844124	72844787	.	+	0	Parent=FBgn0261387.2.mrna1;Target=FBgn0261387.2 352 1015 +
ChrX	stalkie_big_nohaplotig	CDS	72846457	72846602	.	+	2	Parent=FBgn0261387.2.mrna1;Target=FBgn0261387.2 1016 1161 +
ChrX	stalkie_big_nohaplotig	CDS	72848146	72848295	.	+	0	Parent=FBgn0261387.2.mrna1;Target=FBgn0261387.2 1162 1311 +
ChrX	stalkie_big_nohaplotig	CDS	72849032	72849286	.	+	0	Parent=FBgn0261387.2.mrna1;Target=FBgn0261387.2 1312 1566 +
ChrX	gffcl	locus	72849800	72851277	.	.	.	ID=RLOC_00004106;geneIDs=comp104571_c0_seq1.path1,comp153878_c0_seq1.path1;transcripts=comp153878_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72849972	72851277	.	+	.	ID=comp153878_c0_seq1.mrna1;geneID=comp153878_c0_seq1.path1;Name=comp153878_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.2;matches=1297;mismatches=9;indels=1;unknowns=0;Target=comp153878_c0_seq1 1308 2 .;CDS_Target=comp153878_c0_seq1 175 71 .;locus=RLOC_00004106
ChrX	stalkie_big_nohaplotig	exon	72849972	72851277	99	+	.	Parent=comp153878_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	72850041	72850145	.	+	0	Parent=comp153878_c0_seq1.mrna1
ChrX	gffcl	locus	72857742	72858917	.	-	.	ID=RLOC_00004108;geneIDs=FBgn0033315.1.path1;transcripts=FBgn0033315.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72857742	72858917	.	-	.	ID=FBgn0033315.1.mrna1;geneID=FBgn0033315.1.path1;Name=FBgn0033315.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1175;mismatches=1;indels=0;unknowns=0;Target=FBgn0033315.1 1176 1 .;locus=RLOC_00004108
ChrX	stalkie_big_nohaplotig	exon	72857742	72858917	99	-	.	Parent=FBgn0033315.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	72857742	72858917	.	-	0	Parent=FBgn0033315.1.mrna1
ChrX	gffcl	locus	72866781	72867795	.	-	.	ID=RLOC_00004109;geneIDs=comp157439_c0_seq1.path1;transcripts=comp157439_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72866781	72867795	.	-	.	ID=comp157439_c0_seq1.mrna1;geneID=comp157439_c0_seq1.path1;Name=comp157439_c0_seq1;Dir=sensecoverage=99.9;identity=97.3;matches=927;mismatches=14;indels=12;unknowns=0;Target=comp157439_c0_seq1 213 320 +;locus=RLOC_00004109
ChrX	stalkie_big_nohaplotig	exon	72866781	72867566	97	-	.	Parent=comp157439_c0_seq1.mrna1;Target=comp157439_c0_seq1 163 948 +
ChrX	stalkie_big_nohaplotig	exon	72867635	72867795	94	-	.	Parent=comp157439_c0_seq1.mrna1;Target=comp157439_c0_seq1 2 162 +
ChrX	stalkie_big_nohaplotig	CDS	72867409	72867516	.	-	0	Parent=comp157439_c0_seq1.mrna1
ChrX	gffcl	locus	72871639	72873095	.	-	.	ID=RLOC_00004110;geneIDs=FBgn0064225.1.path1;transcripts=FBgn0064225.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72871639	72873095	.	-	.	ID=FBgn0064225.1.mrna1;geneID=FBgn0064225.1.path1;Name=FBgn0064225.1;Dir=sensecoverage=100.0;identity=99.6;matches=902;mismatches=4;indels=0;unknowns=0;locus=RLOC_00004110
ChrX	stalkie_big_nohaplotig	exon	72871639	72871827	99	-	.	Parent=FBgn0064225.1.mrna1;Target=FBgn0064225.1 718 906 +
ChrX	stalkie_big_nohaplotig	exon	72872159	72872596	99	-	.	Parent=FBgn0064225.1.mrna1;Target=FBgn0064225.1 280 717 +
ChrX	stalkie_big_nohaplotig	exon	72872665	72872928	99	-	.	Parent=FBgn0064225.1.mrna1;Target=FBgn0064225.1 16 279 +
ChrX	stalkie_big_nohaplotig	exon	72873081	72873095	100	-	.	Parent=FBgn0064225.1.mrna1;Target=FBgn0064225.1 1 15 +
ChrX	stalkie_big_nohaplotig	CDS	72871639	72871827	.	-	0	Parent=FBgn0064225.1.mrna1;Target=FBgn0064225.1 718 906 +
ChrX	stalkie_big_nohaplotig	CDS	72872159	72872596	.	-	0	Parent=FBgn0064225.1.mrna1;Target=FBgn0064225.1 280 717 +
ChrX	stalkie_big_nohaplotig	CDS	72872665	72872928	.	-	0	Parent=FBgn0064225.1.mrna1;Target=FBgn0064225.1 16 279 +
ChrX	stalkie_big_nohaplotig	CDS	72873081	72873095	.	-	0	Parent=FBgn0064225.1.mrna1;Target=FBgn0064225.1 1 15 +
ChrX	gffcl	locus	72876113	72878474	.	+	.	ID=RLOC_00004111;geneIDs=FBgn0027507.1.path1;transcripts=FBgn0027507.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72876113	72878474	.	+	.	ID=FBgn0027507.1.mrna1;geneID=FBgn0027507.1.path1;Name=FBgn0027507.1;Dir=sensecoverage=100.0;identity=99.6;matches=2197;mismatches=8;indels=0;unknowns=0;locus=RLOC_00004111
ChrX	stalkie_big_nohaplotig	exon	72876113	72876358	100	+	.	Parent=FBgn0027507.1.mrna1;Target=FBgn0027507.1 1 246 +
ChrX	stalkie_big_nohaplotig	exon	72876415	72876600	99	+	.	Parent=FBgn0027507.1.mrna1;Target=FBgn0027507.1 247 432 +
ChrX	stalkie_big_nohaplotig	exon	72876702	72878474	99	+	.	Parent=FBgn0027507.1.mrna1;Target=FBgn0027507.1 433 2205 +
ChrX	stalkie_big_nohaplotig	CDS	72876113	72876358	.	+	0	Parent=FBgn0027507.1.mrna1;Target=FBgn0027507.1 1 246 +
ChrX	stalkie_big_nohaplotig	CDS	72876415	72876600	.	+	0	Parent=FBgn0027507.1.mrna1;Target=FBgn0027507.1 247 432 +
ChrX	stalkie_big_nohaplotig	CDS	72876702	72878474	.	+	0	Parent=FBgn0027507.1.mrna1;Target=FBgn0027507.1 433 2205 +
ChrX	gffcl	locus	72884512	72886020	.	+	.	ID=RLOC_00004112;geneIDs=FBgn0263594.1.path1;transcripts=FBgn0263594.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72884512	72886020	.	+	.	ID=FBgn0263594.1.mrna1;geneID=FBgn0263594.1.path1;Name=FBgn0263594.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1509;mismatches=0;indels=0;unknowns=0;Target=FBgn0263594.1 1509 1 .;locus=RLOC_00004112
ChrX	stalkie_big_nohaplotig	exon	72884512	72886020	100	+	.	Parent=FBgn0263594.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	72884512	72886020	.	+	0	Parent=FBgn0263594.1.mrna1
ChrX	gffcl	locus	72895716	72910932	.	-	.	ID=RLOC_00004113;geneIDs=FBgn0033029.2.path1;transcripts=FBgn0033029.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72895716	72910932	.	-	.	ID=FBgn0033029.2.mrna1;geneID=FBgn0033029.2.path1;Name=FBgn0033029.2;Dir=sensecoverage=100.0;identity=100.0;matches=2502;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004113
ChrX	stalkie_big_nohaplotig	exon	72895716	72895811	100	-	.	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 2407 2502 +
ChrX	stalkie_big_nohaplotig	exon	72896767	72896976	100	-	.	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 2197 2406 +
ChrX	stalkie_big_nohaplotig	exon	72897048	72897610	100	-	.	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 1634 2196 +
ChrX	stalkie_big_nohaplotig	exon	72897895	72898038	100	-	.	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 1490 1633 +
ChrX	stalkie_big_nohaplotig	exon	72899137	72899487	100	-	.	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 1139 1489 +
ChrX	stalkie_big_nohaplotig	exon	72899544	72899610	100	-	.	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 1072 1138 +
ChrX	stalkie_big_nohaplotig	exon	72899687	72899985	100	-	.	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 773 1071 +
ChrX	stalkie_big_nohaplotig	exon	72901970	72902093	100	-	.	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 649 772 +
ChrX	stalkie_big_nohaplotig	exon	72902165	72902500	100	-	.	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 313 648 +
ChrX	stalkie_big_nohaplotig	exon	72902590	72902724	100	-	.	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 178 312 +
ChrX	stalkie_big_nohaplotig	exon	72902779	72902885	100	-	.	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 71 177 +
ChrX	stalkie_big_nohaplotig	exon	72910863	72910932	100	-	.	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 1 70 +
ChrX	stalkie_big_nohaplotig	CDS	72895716	72895811	.	-	0	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 2407 2502 +
ChrX	stalkie_big_nohaplotig	CDS	72896767	72896976	.	-	0	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 2197 2406 +
ChrX	stalkie_big_nohaplotig	CDS	72897048	72897610	.	-	2	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 1634 2196 +
ChrX	stalkie_big_nohaplotig	CDS	72897895	72898038	.	-	2	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 1490 1633 +
ChrX	stalkie_big_nohaplotig	CDS	72899137	72899487	.	-	2	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 1139 1489 +
ChrX	stalkie_big_nohaplotig	CDS	72899544	72899610	.	-	0	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 1072 1138 +
ChrX	stalkie_big_nohaplotig	CDS	72899687	72899985	.	-	2	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 773 1071 +
ChrX	stalkie_big_nohaplotig	CDS	72901970	72902093	.	-	0	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 649 772 +
ChrX	stalkie_big_nohaplotig	CDS	72902165	72902500	.	-	0	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 313 648 +
ChrX	stalkie_big_nohaplotig	CDS	72902590	72902724	.	-	0	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 178 312 +
ChrX	stalkie_big_nohaplotig	CDS	72902779	72902885	.	-	2	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 71 177 +
ChrX	stalkie_big_nohaplotig	CDS	72910863	72910932	.	-	0	Parent=FBgn0033029.2.mrna1;Target=FBgn0033029.2 1 70 +
ChrX	gffcl	locus	72914495	72919336	.	+	.	ID=RLOC_00004114;geneIDs=FBgn0086683.1.path1;transcripts=FBgn0086683.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72914495	72919336	.	+	.	ID=FBgn0086683.1.mrna1;geneID=FBgn0086683.1.path1;Name=FBgn0086683.1;Dir=sensecoverage=100.0;identity=99.9;matches=1058;mismatches=0;indels=1;unknowns=0;Target=FBgn0086683.1 3 62 +;locus=RLOC_00004114
ChrX	stalkie_big_nohaplotig	exon	72914495	72914773	99	+	.	Parent=FBgn0086683.1.mrna1;Target=FBgn0086683.1 1 280 +
ChrX	stalkie_big_nohaplotig	exon	72914830	72915341	100	+	.	Parent=FBgn0086683.1.mrna1;Target=FBgn0086683.1 281 792 +
ChrX	stalkie_big_nohaplotig	exon	72918578	72918752	100	+	.	Parent=FBgn0086683.1.mrna1;Target=FBgn0086683.1 793 967 +
ChrX	stalkie_big_nohaplotig	exon	72919245	72919336	100	+	.	Parent=FBgn0086683.1.mrna1;Target=FBgn0086683.1 968 1059 +
ChrX	stalkie_big_nohaplotig	CDS	72914497	72914555	.	+	0	Parent=FBgn0086683.1.mrna1
ChrX	gffcl	locus	72919646	72920795	.	-	.	ID=RLOC_00004115;geneIDs=AGAP009177.1.path1;transcripts=AGAP009177.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72919646	72920795	.	-	.	ID=AGAP009177.1.mrna1;geneID=AGAP009177.1.path1;Name=AGAP009177.1;Dir=sensecoverage=100.0;identity=99.9;matches=788;mismatches=0;indels=1;unknowns=0;Target=AGAP009177.1 3 38 +;locus=RLOC_00004115
ChrX	stalkie_big_nohaplotig	exon	72919646	72919706	100	-	.	Parent=AGAP009177.1.mrna1;Target=AGAP009177.1 729 789 +
ChrX	stalkie_big_nohaplotig	exon	72919776	72919981	100	-	.	Parent=AGAP009177.1.mrna1;Target=AGAP009177.1 523 728 +
ChrX	stalkie_big_nohaplotig	exon	72920040	72920192	100	-	.	Parent=AGAP009177.1.mrna1;Target=AGAP009177.1 370 522 +
ChrX	stalkie_big_nohaplotig	exon	72920428	72920795	99	-	.	Parent=AGAP009177.1.mrna1;Target=AGAP009177.1 1 369 +
ChrX	stalkie_big_nohaplotig	CDS	72920759	72920793	.	-	0	Parent=AGAP009177.1.mrna1
ChrX	gffcl	locus	72924925	72927277	.	+	.	ID=RLOC_00004116;geneIDs=FBgn0262115.1.path1;transcripts=FBgn0262115.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72924925	72927277	.	+	.	ID=FBgn0262115.1.mrna1;geneID=FBgn0262115.1.path1;Name=FBgn0262115.1;Dir=sensecoverage=100.0;identity=100.0;matches=1464;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004116
ChrX	stalkie_big_nohaplotig	exon	72924925	72925011	100	+	.	Parent=FBgn0262115.1.mrna1;Target=FBgn0262115.1 1 87 +
ChrX	stalkie_big_nohaplotig	exon	72925658	72925750	100	+	.	Parent=FBgn0262115.1.mrna1;Target=FBgn0262115.1 88 180 +
ChrX	stalkie_big_nohaplotig	exon	72925814	72926486	100	+	.	Parent=FBgn0262115.1.mrna1;Target=FBgn0262115.1 181 853 +
ChrX	stalkie_big_nohaplotig	exon	72926557	72926773	100	+	.	Parent=FBgn0262115.1.mrna1;Target=FBgn0262115.1 854 1070 +
ChrX	stalkie_big_nohaplotig	exon	72926831	72926988	100	+	.	Parent=FBgn0262115.1.mrna1;Target=FBgn0262115.1 1071 1228 +
ChrX	stalkie_big_nohaplotig	exon	72927042	72927277	100	+	.	Parent=FBgn0262115.1.mrna1;Target=FBgn0262115.1 1229 1464 +
ChrX	stalkie_big_nohaplotig	CDS	72924925	72925011	.	+	0	Parent=FBgn0262115.1.mrna1;Target=FBgn0262115.1 1 87 +
ChrX	stalkie_big_nohaplotig	CDS	72925658	72925750	.	+	0	Parent=FBgn0262115.1.mrna1;Target=FBgn0262115.1 88 180 +
ChrX	stalkie_big_nohaplotig	CDS	72925814	72926486	.	+	0	Parent=FBgn0262115.1.mrna1;Target=FBgn0262115.1 181 853 +
ChrX	stalkie_big_nohaplotig	CDS	72926557	72926773	.	+	2	Parent=FBgn0262115.1.mrna1;Target=FBgn0262115.1 854 1070 +
ChrX	stalkie_big_nohaplotig	CDS	72926831	72926988	.	+	1	Parent=FBgn0262115.1.mrna1;Target=FBgn0262115.1 1071 1228 +
ChrX	stalkie_big_nohaplotig	CDS	72927042	72927277	.	+	2	Parent=FBgn0262115.1.mrna1;Target=FBgn0262115.1 1229 1464 +
ChrX	gffcl	locus	72934501	72935527	.	-	.	ID=RLOC_00004117;geneIDs=comp162759_c0_seq1.path1;transcripts=comp162759_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72934501	72935527	.	-	.	ID=comp162759_c0_seq1.mrna1;geneID=comp162759_c0_seq1.path1;Name=comp162759_c0_seq1;Dir=antisensecoverage=65.0;identity=85.8;matches=822;mismatches=89;indels=47;unknowns=0;Target=comp162759_c0_seq1 941 1210 .;locus=RLOC_00004117
ChrX	stalkie_big_nohaplotig	exon	72934501	72935282	83	-	.	Parent=comp162759_c0_seq1.mrna1;Target=comp162759_c0_seq1 507 1295 -
ChrX	stalkie_big_nohaplotig	exon	72935379	72935527	97	-	.	Parent=comp162759_c0_seq1.mrna1;Target=comp162759_c0_seq1 1296 1444 -
ChrX	stalkie_big_nohaplotig	CDS	72934941	72935197	.	-	0	Parent=comp162759_c0_seq1.mrna1
ChrX	gffcl	locus	72936604	72942243	.	+	.	ID=RLOC_00004118;geneIDs=FBgn0033031.1.path1,comp149808_c0_seq1.path1;transcripts=FBgn0033031.1.mrna1,comp149808_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72936604	72942243	.	+	.	ID=FBgn0033031.1.mrna1;geneID=FBgn0033031.1.path1;Name=FBgn0033031.1;Dir=sensecoverage=100.0;identity=99.9;matches=1043;mismatches=0;indels=1;unknowns=0;Target=FBgn0033031.1 3 68 +;locus=RLOC_00004118
ChrX	stalkie_big_nohaplotig	exon	72936604	72936916	99	+	.	Parent=FBgn0033031.1.mrna1;Target=FBgn0033031.1 1 314 +
ChrX	stalkie_big_nohaplotig	exon	72940506	72940869	100	+	.	Parent=FBgn0033031.1.mrna1;Target=FBgn0033031.1 315 678 +
ChrX	stalkie_big_nohaplotig	exon	72941791	72941931	100	+	.	Parent=FBgn0033031.1.mrna1;Target=FBgn0033031.1 679 819 +
ChrX	stalkie_big_nohaplotig	exon	72942019	72942243	100	+	.	Parent=FBgn0033031.1.mrna1;Target=FBgn0033031.1 820 1044 +
ChrX	stalkie_big_nohaplotig	CDS	72936606	72936670	.	+	0	Parent=FBgn0033031.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72940847	72941699	.	+	.	ID=comp149808_c0_seq1.mrna1;geneID=comp149808_c0_seq1.path1;Name=comp149808_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=848;mismatches=5;indels=0;unknowns=0;Target=comp149808_c0_seq1 853 1 .;CDS_Target=comp149808_c0_seq1 650 552 .;locus=RLOC_00004118
ChrX	stalkie_big_nohaplotig	exon	72940847	72941699	99	+	.	Parent=comp149808_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	72941398	72941496	.	+	0	Parent=comp149808_c0_seq1.mrna1
ChrX	gffcl	locus	72945314	72948886	.	-	.	ID=RLOC_00004119;geneIDs=FBgn0040009.1.path1;transcripts=FBgn0040009.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72945314	72948886	.	-	.	ID=FBgn0040009.1.mrna1;geneID=FBgn0040009.1.path1;Name=FBgn0040009.1;Dir=sensecoverage=100.0;identity=99.7;matches=2358;mismatches=6;indels=0;unknowns=0;locus=RLOC_00004119
ChrX	stalkie_big_nohaplotig	exon	72945314	72945460	99	-	.	Parent=FBgn0040009.1.mrna1;Target=FBgn0040009.1 2218 2364 +
ChrX	stalkie_big_nohaplotig	exon	72946614	72948043	99	-	.	Parent=FBgn0040009.1.mrna1;Target=FBgn0040009.1 788 2217 +
ChrX	stalkie_big_nohaplotig	exon	72948100	72948886	100	-	.	Parent=FBgn0040009.1.mrna1;Target=FBgn0040009.1 1 787 +
ChrX	stalkie_big_nohaplotig	CDS	72945314	72945460	.	-	0	Parent=FBgn0040009.1.mrna1;Target=FBgn0040009.1 2218 2364 +
ChrX	stalkie_big_nohaplotig	CDS	72946614	72948043	.	-	2	Parent=FBgn0040009.1.mrna1;Target=FBgn0040009.1 788 2217 +
ChrX	stalkie_big_nohaplotig	CDS	72948100	72948886	.	-	0	Parent=FBgn0040009.1.mrna1;Target=FBgn0040009.1 1 787 +
ChrX	gffcl	locus	72951815	72954724	.	-	.	ID=RLOC_00004120;geneIDs=FBgn0058191.1.path1;transcripts=FBgn0058191.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72951815	72954724	.	-	.	ID=FBgn0058191.1.mrna1;geneID=FBgn0058191.1.path1;Name=FBgn0058191.1;Dir=sensecoverage=100.0;identity=100.0;matches=1266;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004120
ChrX	stalkie_big_nohaplotig	exon	72951815	72952570	100	-	.	Parent=FBgn0058191.1.mrna1;Target=FBgn0058191.1 511 1266 +
ChrX	stalkie_big_nohaplotig	exon	72952652	72952774	100	-	.	Parent=FBgn0058191.1.mrna1;Target=FBgn0058191.1 388 510 +
ChrX	stalkie_big_nohaplotig	exon	72954284	72954577	100	-	.	Parent=FBgn0058191.1.mrna1;Target=FBgn0058191.1 94 387 +
ChrX	stalkie_big_nohaplotig	exon	72954632	72954724	100	-	.	Parent=FBgn0058191.1.mrna1;Target=FBgn0058191.1 1 93 +
ChrX	stalkie_big_nohaplotig	CDS	72951815	72952570	.	-	0	Parent=FBgn0058191.1.mrna1;Target=FBgn0058191.1 511 1266 +
ChrX	stalkie_big_nohaplotig	CDS	72952652	72952774	.	-	0	Parent=FBgn0058191.1.mrna1;Target=FBgn0058191.1 388 510 +
ChrX	stalkie_big_nohaplotig	CDS	72954284	72954577	.	-	0	Parent=FBgn0058191.1.mrna1;Target=FBgn0058191.1 94 387 +
ChrX	stalkie_big_nohaplotig	CDS	72954632	72954724	.	-	0	Parent=FBgn0058191.1.mrna1;Target=FBgn0058191.1 1 93 +
ChrX	gffcl	locus	72957337	72964472	.	+	.	ID=RLOC_00004121;geneIDs=FBgn0033718.1.path1;transcripts=FBgn0033718.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72957337	72964472	.	+	.	ID=FBgn0033718.1.mrna1;geneID=FBgn0033718.1.path1;Name=FBgn0033718.1;Dir=sensecoverage=100.0;identity=100.0;matches=5367;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004121
ChrX	stalkie_big_nohaplotig	exon	72957337	72957364	100	+	.	Parent=FBgn0033718.1.mrna1;Target=FBgn0033718.1 1 28 +
ChrX	stalkie_big_nohaplotig	exon	72958174	72962295	100	+	.	Parent=FBgn0033718.1.mrna1;Target=FBgn0033718.1 29 4150 +
ChrX	stalkie_big_nohaplotig	exon	72963256	72964472	100	+	.	Parent=FBgn0033718.1.mrna1;Target=FBgn0033718.1 4151 5367 +
ChrX	stalkie_big_nohaplotig	CDS	72957337	72957364	.	+	0	Parent=FBgn0033718.1.mrna1;Target=FBgn0033718.1 1 28 +
ChrX	stalkie_big_nohaplotig	CDS	72958174	72962295	.	+	2	Parent=FBgn0033718.1.mrna1;Target=FBgn0033718.1 29 4150 +
ChrX	stalkie_big_nohaplotig	CDS	72963256	72964472	.	+	2	Parent=FBgn0033718.1.mrna1;Target=FBgn0033718.1 4151 5367 +
ChrX	gffcl	locus	72968102	72968436	.	-	.	ID=RLOC_00004122;geneIDs=comp144058_c0_seq1.path1;transcripts=comp144058_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72968102	72968436	.	-	.	ID=comp144058_c0_seq1.mrna1;geneID=comp144058_c0_seq1.path1;Name=comp144058_c0_seq1;Dir=indeterminatecoverage=92.3;identity=100.0;matches=335;mismatches=0;indels=0;unknowns=0;Target=comp144058_c0_seq1 350 16 .;CDS_Target=comp144058_c0_seq1 166 17 .;locus=RLOC_00004122
ChrX	stalkie_big_nohaplotig	exon	72968102	72968436	100	-	.	Parent=comp144058_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	72968286	72968435	.	-	0	Parent=comp144058_c0_seq1.mrna1
ChrX	gffcl	locus	72968585	72969199	.	+	.	ID=RLOC_00004123;geneIDs=comp149619_c0_seq1.path1;transcripts=comp149619_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72968585	72969199	.	+	.	ID=comp149619_c0_seq1.mrna1;geneID=comp149619_c0_seq1.path1;Name=comp149619_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=614;mismatches=1;indels=0;unknowns=0;Target=comp149619_c0_seq1 615 1 .;CDS_Target=comp149619_c0_seq1 358 290 .;locus=RLOC_00004123
ChrX	stalkie_big_nohaplotig	exon	72968585	72969199	99	+	.	Parent=comp149619_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	72968874	72968942	.	+	0	Parent=comp149619_c0_seq1.mrna1
ChrX	gffcl	locus	72970074	72970640	.	+	.	ID=RLOC_00004124;geneIDs=comp116640_c0_seq1.path1;transcripts=comp116640_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72970074	72970640	.	+	.	ID=comp116640_c0_seq1.mrna1;geneID=comp116640_c0_seq1.path1;Name=comp116640_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=567;mismatches=0;indels=0;unknowns=0;Target=comp116640_c0_seq1 567 1 .;CDS_Target=comp116640_c0_seq1 465 268 .;locus=RLOC_00004124
ChrX	stalkie_big_nohaplotig	exon	72970074	72970640	100	+	.	Parent=comp116640_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	72970341	72970538	.	+	0	Parent=comp116640_c0_seq1.mrna1
ChrX	gffcl	locus	72973726	73044075	.	-	.	ID=RLOC_00004125;geneIDs=FBgn0041004.1.path1;transcripts=FBgn0041004.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	72973726	73044075	.	-	.	ID=FBgn0041004.1.mrna1;geneID=FBgn0041004.1.path1;Name=FBgn0041004.1;Dir=sensecoverage=100.0;identity=99.6;matches=1046;mismatches=4;indels=0;unknowns=0;locus=RLOC_00004125
ChrX	stalkie_big_nohaplotig	exon	72973726	72973842	100	-	.	Parent=FBgn0041004.1.mrna1;Target=FBgn0041004.1 934 1050 +
ChrX	stalkie_big_nohaplotig	exon	72973901	72974104	100	-	.	Parent=FBgn0041004.1.mrna1;Target=FBgn0041004.1 730 933 +
ChrX	stalkie_big_nohaplotig	exon	72975872	72975939	100	-	.	Parent=FBgn0041004.1.mrna1;Target=FBgn0041004.1 662 729 +
ChrX	stalkie_big_nohaplotig	exon	72976003	72976044	100	-	.	Parent=FBgn0041004.1.mrna1;Target=FBgn0041004.1 620 661 +
ChrX	stalkie_big_nohaplotig	exon	72976262	72976387	99	-	.	Parent=FBgn0041004.1.mrna1;Target=FBgn0041004.1 494 619 +
ChrX	stalkie_big_nohaplotig	exon	73043583	73044075	99	-	.	Parent=FBgn0041004.1.mrna1;Target=FBgn0041004.1 1 493 +
ChrX	stalkie_big_nohaplotig	CDS	72973726	72973842	.	-	0	Parent=FBgn0041004.1.mrna1;Target=FBgn0041004.1 934 1050 +
ChrX	stalkie_big_nohaplotig	CDS	72973901	72974104	.	-	0	Parent=FBgn0041004.1.mrna1;Target=FBgn0041004.1 730 933 +
ChrX	stalkie_big_nohaplotig	CDS	72975872	72975939	.	-	2	Parent=FBgn0041004.1.mrna1;Target=FBgn0041004.1 662 729 +
ChrX	stalkie_big_nohaplotig	CDS	72976003	72976044	.	-	2	Parent=FBgn0041004.1.mrna1;Target=FBgn0041004.1 620 661 +
ChrX	stalkie_big_nohaplotig	CDS	72976262	72976387	.	-	2	Parent=FBgn0041004.1.mrna1;Target=FBgn0041004.1 494 619 +
ChrX	stalkie_big_nohaplotig	CDS	73043583	73044075	.	-	0	Parent=FBgn0041004.1.mrna1;Target=FBgn0041004.1 1 493 +
ChrX	gffcl	locus	73049330	73053401	.	-	.	ID=RLOC_00004126;geneIDs=FBgn0250907.path1;transcripts=FBgn0250907.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73049330	73053401	.	-	.	ID=FBgn0250907.mrna1;geneID=FBgn0250907.path1;Name=FBgn0250907;Dir=sensecoverage=100.0;identity=100.0;matches=3955;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004126
ChrX	stalkie_big_nohaplotig	exon	73049330	73049394	98	-	.	Parent=FBgn0250907.mrna1;Target=FBgn0250907 3892 3956 +
ChrX	stalkie_big_nohaplotig	exon	73049448	73053284	100	-	.	Parent=FBgn0250907.mrna1;Target=FBgn0250907 55 3891 +
ChrX	stalkie_big_nohaplotig	exon	73053348	73053401	100	-	.	Parent=FBgn0250907.mrna1;Target=FBgn0250907 1 54 +
ChrX	stalkie_big_nohaplotig	CDS	73049332	73049394	.	-	0	Parent=FBgn0250907.mrna1;Target=FBgn0250907 3892 3954 +
ChrX	stalkie_big_nohaplotig	CDS	73049448	73053284	.	-	0	Parent=FBgn0250907.mrna1;Target=FBgn0250907 55 3891 +
ChrX	stalkie_big_nohaplotig	CDS	73053348	73053401	.	-	0	Parent=FBgn0250907.mrna1;Target=FBgn0250907 1 54 +
ChrX	gffcl	locus	73095374	73096116	.	+	.	ID=RLOC_00004127;geneIDs=FBgn0040010.3.path1;transcripts=FBgn0040010.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73095374	73096116	.	+	.	ID=FBgn0040010.3.mrna1;geneID=FBgn0040010.3.path1;Name=FBgn0040010.3;Dir=sensecoverage=100.0;identity=99.1;matches=651;mismatches=6;indels=0;unknowns=0;locus=RLOC_00004127
ChrX	stalkie_big_nohaplotig	exon	73095374	73095413	100	+	.	Parent=FBgn0040010.3.mrna1;Target=FBgn0040010.3 1 40 +
ChrX	stalkie_big_nohaplotig	exon	73095500	73096116	99	+	.	Parent=FBgn0040010.3.mrna1;Target=FBgn0040010.3 41 657 +
ChrX	stalkie_big_nohaplotig	CDS	73095374	73095413	.	+	0	Parent=FBgn0040010.3.mrna1;Target=FBgn0040010.3 1 40 +
ChrX	stalkie_big_nohaplotig	CDS	73095500	73096116	.	+	2	Parent=FBgn0040010.3.mrna1;Target=FBgn0040010.3 41 657 +
ChrX	gffcl	locus	73100959	73138532	.	-	.	ID=RLOC_00004128;geneIDs=Dv_FBgn0200226.1.path1,comp160207_c0_seq1.path1;transcripts=comp160207_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73100959	73138532	.	-	.	ID=comp160207_c0_seq1.mrna1;geneID=comp160207_c0_seq1.path1;Name=comp160207_c0_seq1;Dir=sensecoverage=95.0;identity=99.5;matches=3748;mismatches=17;indels=0;unknowns=0;locus=RLOC_00004128
ChrX	stalkie_big_nohaplotig	exon	73100959	73102765	99	-	.	Parent=comp160207_c0_seq1.mrna1;Target=comp160207_c0_seq1 2158 3964 +
ChrX	stalkie_big_nohaplotig	exon	73102827	73103574	99	-	.	Parent=comp160207_c0_seq1.mrna1;Target=comp160207_c0_seq1 1410 2157 +
ChrX	stalkie_big_nohaplotig	exon	73113293	73114461	99	-	.	Parent=comp160207_c0_seq1.mrna1;Target=comp160207_c0_seq1 241 1409 +
ChrX	stalkie_big_nohaplotig	exon	73138492	73138532	100	-	.	Parent=comp160207_c0_seq1.mrna1;Target=comp160207_c0_seq1 200 240 +
ChrX	stalkie_big_nohaplotig	CDS	73100961	73102765	.	-	2	Parent=comp160207_c0_seq1.mrna1;Target=comp160207_c0_seq1 2158 3962 +
ChrX	stalkie_big_nohaplotig	CDS	73102827	73103574	.	-	0	Parent=comp160207_c0_seq1.mrna1;Target=comp160207_c0_seq1 1410 2157 +
ChrX	stalkie_big_nohaplotig	CDS	73113293	73114237	.	-	0	Parent=comp160207_c0_seq1.mrna1;Target=comp160207_c0_seq1 465 1409 +
ChrX	gffcl	locus	73165274	73166137	.	+	.	ID=RLOC_00004129;geneIDs=comp158006_c0_seq1.path1;transcripts=comp158006_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73165274	73166137	.	+	.	ID=comp158006_c0_seq1.mrna1;geneID=comp158006_c0_seq1.path1;Name=comp158006_c0_seq1;Dir=indeterminatecoverage=80.3;identity=96.9;matches=837;mismatches=15;indels=12;unknowns=0;Target=comp158006_c0_seq1 1061 210 .;CDS_Target=comp158006_c0_seq1 930 841 .;locus=RLOC_00004129
ChrX	stalkie_big_nohaplotig	exon	73165274	73166137	96	+	.	Parent=comp158006_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	73165912	73166006	.	+	0	Parent=comp158006_c0_seq1.mrna1
ChrX	gffcl	locus	73273434	73278395	.	-	.	ID=RLOC_00004130;geneIDs=ORF2634.path1;transcripts=ORF2634.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73273434	73278395	.	-	.	ID=ORF2634.mrna1;geneID=ORF2634.path1;Name=ORF2634;Dir=sensecoverage=100.0;identity=98.4;matches=818;mismatches=9;indels=4;unknowns=0;locus=RLOC_00004130
ChrX	stalkie_big_nohaplotig	exon	73273434	73274044	97	-	.	Parent=ORF2634.mrna1;Target=ORF2634 217 831 +
ChrX	stalkie_big_nohaplotig	exon	73274104	73274298	100	-	.	Parent=ORF2634.mrna1;Target=ORF2634 22 216 +
ChrX	stalkie_big_nohaplotig	exon	73278375	73278395	100	-	.	Parent=ORF2634.mrna1;Target=ORF2634 1 21 +
ChrX	stalkie_big_nohaplotig	CDS	73273434	73274044	.	-	0	Parent=ORF2634.mrna1;Target=ORF2634 217 831 +
ChrX	stalkie_big_nohaplotig	CDS	73274104	73274298	.	-	0	Parent=ORF2634.mrna1;Target=ORF2634 22 216 +
ChrX	stalkie_big_nohaplotig	CDS	73278375	73278395	.	-	0	Parent=ORF2634.mrna1;Target=ORF2634 1 21 +
ChrX	gffcl	locus	73290997	73291401	.	+	.	ID=RLOC_00004131;geneIDs=comp129401_c0_seq1.path1;transcripts=comp129401_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73290997	73291401	.	+	.	ID=comp129401_c0_seq1.mrna1;geneID=comp129401_c0_seq1.path1;Name=comp129401_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=399;mismatches=6;indels=0;unknowns=0;Target=comp129401_c0_seq1 405 1 .;CDS_Target=comp129401_c0_seq1 300 175 .;locus=RLOC_00004131
ChrX	stalkie_big_nohaplotig	exon	73290997	73291401	98	+	.	Parent=comp129401_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	73291171	73291296	.	+	0	Parent=comp129401_c0_seq1.mrna1
ChrX	gffcl	locus	73294702	73301211	.	-	.	ID=RLOC_00004132;geneIDs=comp202096_c0_seq1.path1;transcripts=comp202096_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73294702	73301211	.	-	.	ID=comp202096_c0_seq1.mrna1;geneID=comp202096_c0_seq1.path1;Name=comp202096_c0_seq1;Dir=indeterminatecoverage=59.9;identity=99.2;matches=120;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004132
ChrX	stalkie_big_nohaplotig	exon	73294702	73294710	88	-	.	Parent=comp202096_c0_seq1.mrna1;Target=comp202096_c0_seq1 121 113 .
ChrX	stalkie_big_nohaplotig	exon	73301100	73301211	100	-	.	Parent=comp202096_c0_seq1.mrna1;Target=comp202096_c0_seq1 112 1 .
ChrX	stalkie_big_nohaplotig	CDS	73294702	73294710	.	-	2	Parent=comp202096_c0_seq1.mrna1;Target=comp202096_c0_seq1 121 113 .
ChrX	stalkie_big_nohaplotig	CDS	73301100	73301211	.	-	0	Parent=comp202096_c0_seq1.mrna1;Target=comp202096_c0_seq1 112 1 .
ChrX	gffcl	locus	73296059	73301356	.	+	.	ID=RLOC_00004133;geneIDs=FBgn0032979.1.path1;transcripts=FBgn0032979.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73296059	73301356	.	+	.	ID=FBgn0032979.1.mrna1;geneID=FBgn0032979.1.path1;Name=FBgn0032979.1;Dir=sensecoverage=100.0;identity=99.8;matches=1596;mismatches=3;indels=0;unknowns=0;locus=RLOC_00004133
ChrX	stalkie_big_nohaplotig	exon	73296059	73296238	100	+	.	Parent=FBgn0032979.1.mrna1;Target=FBgn0032979.1 1 180 +
ChrX	stalkie_big_nohaplotig	exon	73296306	73296506	100	+	.	Parent=FBgn0032979.1.mrna1;Target=FBgn0032979.1 181 381 +
ChrX	stalkie_big_nohaplotig	exon	73300006	73300868	99	+	.	Parent=FBgn0032979.1.mrna1;Target=FBgn0032979.1 382 1244 +
ChrX	stalkie_big_nohaplotig	exon	73300932	73301117	100	+	.	Parent=FBgn0032979.1.mrna1;Target=FBgn0032979.1 1245 1430 +
ChrX	stalkie_big_nohaplotig	exon	73301188	73301356	100	+	.	Parent=FBgn0032979.1.mrna1;Target=FBgn0032979.1 1431 1599 +
ChrX	stalkie_big_nohaplotig	CDS	73296059	73296238	.	+	0	Parent=FBgn0032979.1.mrna1;Target=FBgn0032979.1 1 180 +
ChrX	stalkie_big_nohaplotig	CDS	73296306	73296506	.	+	0	Parent=FBgn0032979.1.mrna1;Target=FBgn0032979.1 181 381 +
ChrX	stalkie_big_nohaplotig	CDS	73300006	73300868	.	+	0	Parent=FBgn0032979.1.mrna1;Target=FBgn0032979.1 382 1244 +
ChrX	stalkie_big_nohaplotig	CDS	73300932	73301117	.	+	1	Parent=FBgn0032979.1.mrna1;Target=FBgn0032979.1 1245 1430 +
ChrX	stalkie_big_nohaplotig	CDS	73301188	73301356	.	+	1	Parent=FBgn0032979.1.mrna1;Target=FBgn0032979.1 1431 1599 +
ChrX	gffcl	locus	73306847	73307246	.	+	.	ID=RLOC_00004134;geneIDs=comp116069_c0_seq1.path1;transcripts=comp116069_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73306847	73307246	.	+	.	ID=comp116069_c0_seq1.mrna1;geneID=comp116069_c0_seq1.path1;Name=comp116069_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=399;mismatches=1;indels=1;unknowns=0;Target=comp116069_c0_seq1 401 1 .;CDS_Target=comp116069_c0_seq1 241 179 .;locus=RLOC_00004134
ChrX	stalkie_big_nohaplotig	exon	73306847	73307246	99	+	.	Parent=comp116069_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	73307024	73307086	.	+	0	Parent=comp116069_c0_seq1.mrna1
ChrX	gffcl	locus	73315791	73317258	.	+	.	ID=RLOC_00004135;geneIDs=comp136641_c0_seq1.path1,comp147770_c0_seq1.path1;transcripts=comp147770_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73315791	73316980	.	+	.	ID=comp147770_c0_seq1.mrna1;geneID=comp147770_c0_seq1.path1;Name=comp147770_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.1;matches=1156;mismatches=22;indels=13;unknowns=0;Target=comp147770_c0_seq1 1181 3 .;CDS_Target=comp147770_c0_seq1 375 286 .;locus=RLOC_00004135
ChrX	stalkie_big_nohaplotig	exon	73315791	73316980	97	+	.	Parent=comp147770_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	73316073	73316162	.	+	0	Parent=comp147770_c0_seq1.mrna1
ChrX	gffcl	locus	73317279	73318153	.	+	.	ID=RLOC_00004136;geneIDs=comp160203_c0_seq1.path1;transcripts=comp160203_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73317279	73318153	.	+	.	ID=comp160203_c0_seq1.mrna1;geneID=comp160203_c0_seq1.path1;Name=comp160203_c0_seq1;Dir=indeterminatecoverage=99.4;identity=94.9;matches=854;mismatches=21;indels=25;unknowns=0;Target=comp160203_c0_seq1 905 6 .;CDS_Target=comp160203_c0_seq1 255 106 .;locus=RLOC_00004136
ChrX	stalkie_big_nohaplotig	exon	73317279	73318153	94	+	.	Parent=comp160203_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	73317379	73317510	.	+	0	Parent=comp160203_c0_seq1.mrna1
ChrX	gffcl	locus	73319248	73319465	.	+	.	ID=RLOC_00004137;geneIDs=comp115188_c0_seq1.path1;transcripts=comp115188_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73319248	73319465	.	+	.	ID=comp115188_c0_seq1.mrna1;geneID=comp115188_c0_seq1.path1;Name=comp115188_c0_seq1;Dir=indeterminatecoverage=98.6;identity=96.3;matches=210;mismatches=8;indels=0;unknowns=0;Target=comp115188_c0_seq1 221 4 .;CDS_Target=comp115188_c0_seq1 181 98 .;locus=RLOC_00004137
ChrX	stalkie_big_nohaplotig	exon	73319248	73319465	96	+	.	Parent=comp115188_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	73319342	73319425	.	+	0	Parent=comp115188_c0_seq1.mrna1
ChrX	gffcl	locus	73320086	73495598	.	-	.	ID=RLOC_00004138;geneIDs=FBgn0261802.path1,comp157064_c0_seq1.path1;transcripts=FBgn0261802.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73321387	73495598	.	-	.	ID=FBgn0261802.mrna1;geneID=FBgn0261802.path1;Name=FBgn0261802;Dir=sensecoverage=100.0;identity=99.7;matches=1316;mismatches=4;indels=0;unknowns=0;locus=RLOC_00004138
ChrX	stalkie_big_nohaplotig	exon	73321387	73322616	99	-	.	Parent=FBgn0261802.mrna1;Target=FBgn0261802 1230 1 .
ChrX	stalkie_big_nohaplotig	exon	73335958	73336312	100	-	.	Parent=FBgn0261802.mrna1;Target=FBgn0261802 966 1320 +
ChrX	stalkie_big_nohaplotig	exon	73348636	73348842	100	-	.	Parent=FBgn0261802.mrna1;Target=FBgn0261802 759 965 +
ChrX	stalkie_big_nohaplotig	exon	73348909	73349495	99	-	.	Parent=FBgn0261802.mrna1;Target=FBgn0261802 172 758 +
ChrX	stalkie_big_nohaplotig	exon	73495428	73495598	100	-	.	Parent=FBgn0261802.mrna1;Target=FBgn0261802 1 171 +
ChrX	stalkie_big_nohaplotig	CDS	73321387	73322616	.	-	0	Parent=FBgn0261802.mrna1;Target=FBgn0261802 1230 1 .
ChrX	stalkie_big_nohaplotig	CDS	73335958	73336312	.	-	1	Parent=FBgn0261802.mrna1;Target=FBgn0261802 966 1320 +
ChrX	stalkie_big_nohaplotig	CDS	73348636	73348842	.	-	1	Parent=FBgn0261802.mrna1;Target=FBgn0261802 759 965 +
ChrX	stalkie_big_nohaplotig	CDS	73348909	73349495	.	-	0	Parent=FBgn0261802.mrna1;Target=FBgn0261802 172 758 +
ChrX	stalkie_big_nohaplotig	CDS	73495428	73495598	.	-	0	Parent=FBgn0261802.mrna1;Target=FBgn0261802 1 171 +
ChrX	gffcl	locus	73332272	73334250	.	-	.	ID=RLOC_00004139;geneIDs=comp156875_c0_seq1.path1;transcripts=comp156875_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73332272	73334250	.	-	.	ID=comp156875_c0_seq1.mrna1;geneID=comp156875_c0_seq1.path1;Name=comp156875_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1048;mismatches=4;indels=0;unknowns=0;Target=comp156875_c0_seq1 698 543 .;locus=RLOC_00004139
ChrX	stalkie_big_nohaplotig	exon	73332272	73333103	99	-	.	Parent=comp156875_c0_seq1.mrna1;Target=comp156875_c0_seq1 1052 221 .
ChrX	stalkie_big_nohaplotig	exon	73334031	73334250	99	-	.	Parent=comp156875_c0_seq1.mrna1;Target=comp156875_c0_seq1 220 1 .
ChrX	stalkie_big_nohaplotig	CDS	73332626	73332781	.	-	0	Parent=comp156875_c0_seq1.mrna1
ChrX	gffcl	locus	73335124	73335336	.	+	.	ID=RLOC_00004140;geneIDs=comp83014_c0_seq1.path1;transcripts=comp83014_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73335124	73335336	.	+	.	ID=comp83014_c0_seq1.mrna1;geneID=comp83014_c0_seq1.path1;Name=comp83014_c0_seq1;Dir=indeterminatecoverage=81.6;identity=100.0;matches=213;mismatches=0;indels=0;unknowns=0;Target=comp83014_c0_seq1 261 49 .;CDS_Target=comp83014_c0_seq1 95 51 .;locus=RLOC_00004140
ChrX	stalkie_big_nohaplotig	exon	73335124	73335336	100	+	.	Parent=comp83014_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	73335126	73335170	.	+	0	Parent=comp83014_c0_seq1.mrna1
ChrX	gffcl	locus	73341853	73342889	.	+	.	ID=RLOC_00004141;geneIDs=comp157024_c0_seq1.path1;transcripts=comp157024_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73341853	73342889	.	+	.	ID=comp157024_c0_seq1.mrna1;geneID=comp157024_c0_seq1.path1;Name=comp157024_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.9;matches=1017;mismatches=14;indels=8;unknowns=0;Target=comp157024_c0_seq1 1033 1 .;CDS_Target=comp157024_c0_seq1 862 752 .;locus=RLOC_00004141
ChrX	stalkie_big_nohaplotig	exon	73341853	73342889	97	+	.	Parent=comp157024_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	73342608	73342718	.	+	0	Parent=comp157024_c0_seq1.mrna1
ChrX	gffcl	locus	73403227	73404573	.	+	.	ID=RLOC_00004142;geneIDs=comp1098153_c0_seq1.path1;transcripts=comp1098153_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73403227	73404573	.	+	.	ID=comp1098153_c0_seq1.mrna1;geneID=comp1098153_c0_seq1.path1;Name=comp1098153_c0_seq1;Dir=sensecoverage=100.0;identity=96.0;matches=573;mismatches=22;indels=2;unknowns=0;Target=comp1098153_c0_seq1 3 131 +;locus=RLOC_00004142
ChrX	stalkie_big_nohaplotig	exon	73403227	73403397	98	+	.	Parent=comp1098153_c0_seq1.mrna1;Target=comp1098153_c0_seq1 1 171 +
ChrX	stalkie_big_nohaplotig	exon	73404090	73404317	92	+	.	Parent=comp1098153_c0_seq1.mrna1;Target=comp1098153_c0_seq1 172 400 +
ChrX	stalkie_big_nohaplotig	exon	73404378	73404573	97	+	.	Parent=comp1098153_c0_seq1.mrna1;Target=comp1098153_c0_seq1 401 597 +
ChrX	stalkie_big_nohaplotig	CDS	73403229	73403357	.	+	0	Parent=comp1098153_c0_seq1.mrna1
ChrX	gffcl	locus	73409624	73410170	.	-	.	ID=RLOC_00004143;geneIDs=comp151804_c0_seq1.path1;transcripts=comp151804_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73409624	73410170	.	-	.	ID=comp151804_c0_seq1.mrna1;geneID=comp151804_c0_seq1.path1;Name=comp151804_c0_seq1;Dir=indeterminatecoverage=93.8;identity=80.4;matches=440;mismatches=15;indels=92;unknowns=0;Target=comp151804_c0_seq1 455 1 .;CDS_Target=comp151804_c0_seq1 232 158 .;locus=RLOC_00004143
ChrX	stalkie_big_nohaplotig	exon	73409624	73410170	80	-	.	Parent=comp151804_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	73409848	73409973	.	-	0	Parent=comp151804_c0_seq1.mrna1
ChrX	gffcl	locus	73535514	73536476	.	+	.	ID=RLOC_00004144;geneIDs=comp154956_c0_seq1.path1;transcripts=comp154956_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73535514	73536476	.	+	.	ID=comp154956_c0_seq1.mrna1;geneID=comp154956_c0_seq1.path1;Name=comp154956_c0_seq1;Dir=antisensecoverage=99.2;identity=97.8;matches=838;mismatches=12;indels=7;unknowns=0;Target=comp154956_c0_seq1 435 719 .;locus=RLOC_00004144
ChrX	stalkie_big_nohaplotig	exon	73535514	73535993	98	+	.	Parent=comp154956_c0_seq1.mrna1;Target=comp154956_c0_seq1 385 864 -
ChrX	stalkie_big_nohaplotig	exon	73536054	73536204	91	+	.	Parent=comp154956_c0_seq1.mrna1;Target=comp154956_c0_seq1 227 384 -
ChrX	stalkie_big_nohaplotig	exon	73536258	73536476	99	+	.	Parent=comp154956_c0_seq1.mrna1;Target=comp154956_c0_seq1 8 226 -
ChrX	stalkie_big_nohaplotig	CDS	73535659	73535943	.	+	0	Parent=comp154956_c0_seq1.mrna1
ChrX	gffcl	locus	73560000	73560503	.	-	.	ID=RLOC_00004145;geneIDs=FBgn0015320.3.path1;transcripts=FBgn0015320.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73560000	73560503	.	-	.	ID=FBgn0015320.3.mrna1;geneID=FBgn0015320.3.path1;Name=FBgn0015320.3;Dir=indeterminatecoverage=100.0;identity=98.4;matches=496;mismatches=8;indels=0;unknowns=0;Target=FBgn0015320.3 504 1 .;locus=RLOC_00004145
ChrX	stalkie_big_nohaplotig	exon	73560000	73560503	98	-	.	Parent=FBgn0015320.3.mrna1
ChrX	stalkie_big_nohaplotig	CDS	73560000	73560503	.	-	0	Parent=FBgn0015320.3.mrna1
ChrX	gffcl	locus	73616645	73619757	.	-	.	ID=RLOC_00004146;geneIDs=ORF561.path1;transcripts=ORF561.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73616645	73619757	.	-	.	ID=ORF561.mrna1;geneID=ORF561.path1;Name=ORF561;Dir=sensecoverage=100.0;identity=99.9;matches=1651;mismatches=2;indels=0;unknowns=0;locus=RLOC_00004146
ChrX	stalkie_big_nohaplotig	exon	73616645	73617784	99	-	.	Parent=ORF561.mrna1;Target=ORF561 514 1653 +
ChrX	stalkie_big_nohaplotig	exon	73619190	73619336	100	-	.	Parent=ORF561.mrna1;Target=ORF561 367 513 +
ChrX	stalkie_big_nohaplotig	exon	73619392	73619757	99	-	.	Parent=ORF561.mrna1;Target=ORF561 1 366 +
ChrX	stalkie_big_nohaplotig	CDS	73616645	73617784	.	-	0	Parent=ORF561.mrna1;Target=ORF561 514 1653 +
ChrX	stalkie_big_nohaplotig	CDS	73619190	73619336	.	-	0	Parent=ORF561.mrna1;Target=ORF561 367 513 +
ChrX	stalkie_big_nohaplotig	CDS	73619392	73619757	.	-	0	Parent=ORF561.mrna1;Target=ORF561 1 366 +
ChrX	gffcl	locus	73623178	73630326	.	+	.	ID=RLOC_00004147;geneIDs=FBgn0032974.1.path1;transcripts=FBgn0032974.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73623178	73630326	.	+	.	ID=FBgn0032974.1.mrna1;geneID=FBgn0032974.1.path1;Name=FBgn0032974.1;Dir=sensecoverage=100.0;identity=99.9;matches=2338;mismatches=2;indels=0;unknowns=0;locus=RLOC_00004147
ChrX	stalkie_big_nohaplotig	exon	73623178	73623546	100	+	.	Parent=FBgn0032974.1.mrna1;Target=FBgn0032974.1 1 369 +
ChrX	stalkie_big_nohaplotig	exon	73623696	73624530	100	+	.	Parent=FBgn0032974.1.mrna1;Target=FBgn0032974.1 370 1204 +
ChrX	stalkie_big_nohaplotig	exon	73627169	73627773	100	+	.	Parent=FBgn0032974.1.mrna1;Target=FBgn0032974.1 1205 1809 +
ChrX	stalkie_big_nohaplotig	exon	73627858	73627944	100	+	.	Parent=FBgn0032974.1.mrna1;Target=FBgn0032974.1 1810 1896 +
ChrX	stalkie_big_nohaplotig	exon	73628003	73628203	100	+	.	Parent=FBgn0032974.1.mrna1;Target=FBgn0032974.1 1897 2097 +
ChrX	stalkie_big_nohaplotig	exon	73629237	73629366	100	+	.	Parent=FBgn0032974.1.mrna1;Target=FBgn0032974.1 2098 2227 +
ChrX	stalkie_big_nohaplotig	exon	73630214	73630326	98	+	.	Parent=FBgn0032974.1.mrna1;Target=FBgn0032974.1 2228 2340 +
ChrX	stalkie_big_nohaplotig	CDS	73623178	73623546	.	+	0	Parent=FBgn0032974.1.mrna1;Target=FBgn0032974.1 1 369 +
ChrX	stalkie_big_nohaplotig	CDS	73623696	73624530	.	+	0	Parent=FBgn0032974.1.mrna1;Target=FBgn0032974.1 370 1204 +
ChrX	stalkie_big_nohaplotig	CDS	73627169	73627773	.	+	2	Parent=FBgn0032974.1.mrna1;Target=FBgn0032974.1 1205 1809 +
ChrX	stalkie_big_nohaplotig	CDS	73627858	73627944	.	+	0	Parent=FBgn0032974.1.mrna1;Target=FBgn0032974.1 1810 1896 +
ChrX	stalkie_big_nohaplotig	CDS	73628003	73628203	.	+	0	Parent=FBgn0032974.1.mrna1;Target=FBgn0032974.1 1897 2097 +
ChrX	stalkie_big_nohaplotig	CDS	73629237	73629366	.	+	0	Parent=FBgn0032974.1.mrna1;Target=FBgn0032974.1 2098 2227 +
ChrX	stalkie_big_nohaplotig	CDS	73630214	73630326	.	+	2	Parent=FBgn0032974.1.mrna1;Target=FBgn0032974.1 2228 2340 +
ChrX	gffcl	locus	73637999	73641172	.	-	.	ID=RLOC_00004148;geneIDs=FBgn0025674.1.path1;transcripts=FBgn0025674.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73637999	73641172	.	-	.	ID=FBgn0025674.1.mrna1;geneID=FBgn0025674.1.path1;Name=FBgn0025674.1;Dir=sensecoverage=100.0;identity=99.0;matches=2989;mismatches=29;indels=0;unknowns=0;locus=RLOC_00004148
ChrX	stalkie_big_nohaplotig	exon	73637999	73638896	99	-	.	Parent=FBgn0025674.1.mrna1;Target=FBgn0025674.1 2121 3018 +
ChrX	stalkie_big_nohaplotig	exon	73638999	73640719	98	-	.	Parent=FBgn0025674.1.mrna1;Target=FBgn0025674.1 400 2120 +
ChrX	stalkie_big_nohaplotig	exon	73640774	73641172	99	-	.	Parent=FBgn0025674.1.mrna1;Target=FBgn0025674.1 1 399 +
ChrX	stalkie_big_nohaplotig	CDS	73637999	73638896	.	-	1	Parent=FBgn0025674.1.mrna1;Target=FBgn0025674.1 2121 3018 +
ChrX	stalkie_big_nohaplotig	CDS	73638999	73640719	.	-	0	Parent=FBgn0025674.1.mrna1;Target=FBgn0025674.1 400 2120 +
ChrX	stalkie_big_nohaplotig	CDS	73640774	73641172	.	-	0	Parent=FBgn0025674.1.mrna1;Target=FBgn0025674.1 1 399 +
ChrX	gffcl	locus	73648698	73682237	.	.	.	ID=RLOC_00004149;geneIDs=FBgn0031814.1.path1,comp144348_c1_seq1.path1;transcripts=FBgn0031814.1.mrna1,comp144348_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73648698	73682237	.	+	.	ID=FBgn0031814.1.mrna1;geneID=FBgn0031814.1.path1;Name=FBgn0031814.1;Dir=sensecoverage=100.0;identity=100.0;matches=1965;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004149
ChrX	stalkie_big_nohaplotig	exon	73648698	73648769	100	+	.	Parent=FBgn0031814.1.mrna1;Target=FBgn0031814.1 1 72 +
ChrX	stalkie_big_nohaplotig	exon	73677173	73678114	100	+	.	Parent=FBgn0031814.1.mrna1;Target=FBgn0031814.1 73 1014 +
ChrX	stalkie_big_nohaplotig	exon	73678189	73678447	100	+	.	Parent=FBgn0031814.1.mrna1;Target=FBgn0031814.1 1015 1273 +
ChrX	stalkie_big_nohaplotig	exon	73679925	73680046	100	+	.	Parent=FBgn0031814.1.mrna1;Target=FBgn0031814.1 1274 1395 +
ChrX	stalkie_big_nohaplotig	exon	73680752	73681031	100	+	.	Parent=FBgn0031814.1.mrna1;Target=FBgn0031814.1 1396 1675 +
ChrX	stalkie_big_nohaplotig	exon	73681115	73681215	100	+	.	Parent=FBgn0031814.1.mrna1;Target=FBgn0031814.1 1676 1776 +
ChrX	stalkie_big_nohaplotig	exon	73682049	73682237	100	+	.	Parent=FBgn0031814.1.mrna1;Target=FBgn0031814.1 1777 1965 +
ChrX	stalkie_big_nohaplotig	CDS	73648698	73648769	.	+	0	Parent=FBgn0031814.1.mrna1;Target=FBgn0031814.1 1 72 +
ChrX	stalkie_big_nohaplotig	CDS	73677173	73678114	.	+	0	Parent=FBgn0031814.1.mrna1;Target=FBgn0031814.1 73 1014 +
ChrX	stalkie_big_nohaplotig	CDS	73678189	73678447	.	+	0	Parent=FBgn0031814.1.mrna1;Target=FBgn0031814.1 1015 1273 +
ChrX	stalkie_big_nohaplotig	CDS	73679925	73680046	.	+	2	Parent=FBgn0031814.1.mrna1;Target=FBgn0031814.1 1274 1395 +
ChrX	stalkie_big_nohaplotig	CDS	73680752	73681031	.	+	0	Parent=FBgn0031814.1.mrna1;Target=FBgn0031814.1 1396 1675 +
ChrX	stalkie_big_nohaplotig	CDS	73681115	73681215	.	+	2	Parent=FBgn0031814.1.mrna1;Target=FBgn0031814.1 1676 1776 +
ChrX	stalkie_big_nohaplotig	CDS	73682049	73682237	.	+	0	Parent=FBgn0031814.1.mrna1;Target=FBgn0031814.1 1777 1965 +
ChrX	stalkie_big_nohaplotig	mRNA	73680324	73680773	.	-	.	ID=comp144348_c1_seq1.mrna1;geneID=comp144348_c1_seq1.path1;Name=comp144348_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=448;mismatches=2;indels=0;unknowns=0;Target=comp144348_c1_seq1 450 1 .;CDS_Target=comp144348_c1_seq1 337 254 .;locus=RLOC_00004149
ChrX	stalkie_big_nohaplotig	exon	73680324	73680773	99	-	.	Parent=comp144348_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	73680437	73680520	.	-	0	Parent=comp144348_c1_seq1.mrna1
ChrX	gffcl	locus	73663291	74722513	.	.	.	ID=RLOC_00004150;geneIDs=FBgn0011207.1.path1,comp93614_c0_seq1.path1,comp143914_c0_seq1.path1,comp155018_c0_seq1.path1,comp155129_c0_seq1.path1,comp158446_c1_seq1.path1,comp159662_c2_seq1.path1;transcripts=comp158446_c1_seq1.mrna1,comp155018_c0_seq1.mrna1,comp159662_c2_seq1.mrna1,comp155129_c0_seq1.mrna1,FBgn0011207.1.mrna1,comp143914_c0_seq1.mrna1,comp93614_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73663291	74718224	.	-	.	ID=comp158446_c1_seq1.mrna1;geneID=comp158446_c1_seq1.path1;Name=comp158446_c1_seq1;Dir=indeterminatecoverage=72.9;identity=95.1;matches=2176;mismatches=25;indels=86;unknowns=0;Target=comp158446_c1_seq1 955 767 .;locus=RLOC_00004150
ChrX	stalkie_big_nohaplotig	exon	73663291	73663309	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2629 2611 .
ChrX	stalkie_big_nohaplotig	exon	73664102	73664118	30	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2586 2532 .
ChrX	stalkie_big_nohaplotig	exon	73664127	73664131	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2473 2469 .
ChrX	stalkie_big_nohaplotig	exon	73666218	73666227	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2453 2444 .
ChrX	stalkie_big_nohaplotig	exon	73668324	73668355	55	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2443 2406 .
ChrX	stalkie_big_nohaplotig	exon	73670990	73670996	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2405 2399 .
ChrX	stalkie_big_nohaplotig	exon	73677408	73677416	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2343 2335 .
ChrX	stalkie_big_nohaplotig	exon	73677429	73677437	88	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2279 2271 .
ChrX	stalkie_big_nohaplotig	exon	73678119	73678127	88	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2270 2262 .
ChrX	stalkie_big_nohaplotig	exon	73678997	73679013	41	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2217 2184 .
ChrX	stalkie_big_nohaplotig	exon	73679098	73679105	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2183 2176 .
ChrX	stalkie_big_nohaplotig	exon	73682683	73682693	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2154 2144 .
ChrX	stalkie_big_nohaplotig	exon	73682723	73682725	66	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2076 2074 .
ChrX	stalkie_big_nohaplotig	exon	73686892	73686919	75	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2073 2052 .
ChrX	stalkie_big_nohaplotig	exon	73688464	73688466	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2051 2049 .
ChrX	stalkie_big_nohaplotig	exon	73695797	73695800	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2048 2045 .
ChrX	stalkie_big_nohaplotig	exon	73699195	73699199	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2044 2040 .
ChrX	stalkie_big_nohaplotig	exon	73703113	73703116	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2039 2036 .
ChrX	stalkie_big_nohaplotig	exon	73717038	73717043	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2035 2030 .
ChrX	stalkie_big_nohaplotig	exon	73722354	73722362	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2029 2021 .
ChrX	stalkie_big_nohaplotig	exon	73723637	73723640	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2020 2017 .
ChrX	stalkie_big_nohaplotig	exon	74613962	74613973	91	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2016 2005 .
ChrX	stalkie_big_nohaplotig	exon	74615574	74615576	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2004 2002 .
ChrX	stalkie_big_nohaplotig	exon	74617049	74617055	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 2001 1995 .
ChrX	stalkie_big_nohaplotig	exon	74641369	74641379	81	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 1994 1984 .
ChrX	stalkie_big_nohaplotig	exon	74650044	74650052	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 1983 1975 .
ChrX	stalkie_big_nohaplotig	exon	74655637	74655647	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 1974 1964 .
ChrX	stalkie_big_nohaplotig	exon	74658785	74658795	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 1950 1940 .
ChrX	stalkie_big_nohaplotig	exon	74662142	74662146	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 1939 1935 .
ChrX	stalkie_big_nohaplotig	exon	74674995	74674997	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 1934 1932 .
ChrX	stalkie_big_nohaplotig	exon	74689139	74689140	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 1931 1930 .
ChrX	stalkie_big_nohaplotig	exon	74693499	74693501	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 1929 1927 .
ChrX	stalkie_big_nohaplotig	exon	74699290	74699293	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 1926 1923 .
ChrX	stalkie_big_nohaplotig	exon	74699622	74699625	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 1922 1919 .
ChrX	stalkie_big_nohaplotig	exon	74704977	74704983	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 1918 1912 .
ChrX	stalkie_big_nohaplotig	exon	74711392	74711397	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 1911 1906 .
ChrX	stalkie_big_nohaplotig	exon	74716059	74716064	100	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 1905 1900 .
ChrX	stalkie_big_nohaplotig	exon	74716345	74718224	98	-	.	Parent=comp158446_c1_seq1.mrna1;Target=comp158446_c1_seq1 1899 1 .
ChrX	stalkie_big_nohaplotig	CDS	74717270	74717458	.	-	0	Parent=comp158446_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73695473	73697190	.	+	.	ID=comp155018_c0_seq1.mrna1;geneID=comp155018_c0_seq1.path1;Name=comp155018_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.5;matches=1710;mismatches=8;indels=0;unknowns=0;Target=comp155018_c0_seq1 1718 1 .;CDS_Target=comp155018_c0_seq1 899 459 .;locus=RLOC_00004150
ChrX	stalkie_big_nohaplotig	exon	73695473	73697190	99	+	.	Parent=comp155018_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	73695931	73696371	.	+	0	Parent=comp155018_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74504162	74722513	.	-	.	ID=comp159662_c2_seq1.mrna1;geneID=comp159662_c2_seq1.path1;Name=comp159662_c2_seq1;Dir=antisensecoverage=39.9;identity=93.3;matches=991;mismatches=37;indels=34;unknowns=0;Target=comp159662_c2_seq1 2540 2650 .;locus=RLOC_00004150
ChrX	stalkie_big_nohaplotig	exon	74504162	74504171	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1670 1679 -
ChrX	stalkie_big_nohaplotig	exon	74508374	74508379	83	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1680 1685 -
ChrX	stalkie_big_nohaplotig	exon	74528765	74528813	54	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1686 1746 -
ChrX	stalkie_big_nohaplotig	exon	74536433	74536441	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1747 1755 -
ChrX	stalkie_big_nohaplotig	exon	74540093	74540103	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1768 1778 -
ChrX	stalkie_big_nohaplotig	exon	74555088	74555091	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1779 1782 -
ChrX	stalkie_big_nohaplotig	exon	74562220	74562223	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1783 1786 -
ChrX	stalkie_big_nohaplotig	exon	74565721	74565724	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1787 1790 -
ChrX	stalkie_big_nohaplotig	exon	74567312	74567316	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1791 1795 -
ChrX	stalkie_big_nohaplotig	exon	74586433	74586438	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1796 1801 -
ChrX	stalkie_big_nohaplotig	exon	74594380	74594383	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1802 1805 -
ChrX	stalkie_big_nohaplotig	exon	74597378	74597385	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1806 1813 -
ChrX	stalkie_big_nohaplotig	exon	74600845	74600854	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1814 1823 -
ChrX	stalkie_big_nohaplotig	exon	74602758	74602766	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1824 1832 -
ChrX	stalkie_big_nohaplotig	exon	74603415	74603419	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1833 1837 -
ChrX	stalkie_big_nohaplotig	exon	74605697	74605698	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1838 1839 -
ChrX	stalkie_big_nohaplotig	exon	74616725	74616736	75	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1840 1850 -
ChrX	stalkie_big_nohaplotig	exon	74629243	74629248	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1851 1856 -
ChrX	stalkie_big_nohaplotig	exon	74634217	74634224	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1857 1864 -
ChrX	stalkie_big_nohaplotig	exon	74652579	74652589	90	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1865 1874 -
ChrX	stalkie_big_nohaplotig	exon	74675227	74675232	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1875 1880 -
ChrX	stalkie_big_nohaplotig	exon	74678778	74678785	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1881 1888 -
ChrX	stalkie_big_nohaplotig	exon	74681138	74681142	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1889 1893 -
ChrX	stalkie_big_nohaplotig	exon	74682231	74682235	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1894 1898 -
ChrX	stalkie_big_nohaplotig	exon	74685886	74685904	68	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1899 1911 -
ChrX	stalkie_big_nohaplotig	exon	74687491	74687495	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1912 1916 -
ChrX	stalkie_big_nohaplotig	exon	74693199	74693210	75	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1917 1928 -
ChrX	stalkie_big_nohaplotig	exon	74695817	74695827	81	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1929 1939 -
ChrX	stalkie_big_nohaplotig	exon	74699436	74699441	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1940 1945 -
ChrX	stalkie_big_nohaplotig	exon	74699466	74699472	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 1998 2004 -
ChrX	stalkie_big_nohaplotig	exon	74705726	74705732	100	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 2005 2011 -
ChrX	stalkie_big_nohaplotig	exon	74714743	74714799	56	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 2012 2060 -
ChrX	stalkie_big_nohaplotig	exon	74721800	74722513	99	-	.	Parent=comp159662_c2_seq1.mrna1;Target=comp159662_c2_seq1 2061 2776 -
ChrX	stalkie_big_nohaplotig	CDS	74722277	74722387	.	-	0	Parent=comp159662_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74613944	74615196	.	+	.	ID=comp155129_c0_seq1.mrna1;geneID=comp155129_c0_seq1.path1;Name=comp155129_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1251;mismatches=2;indels=4;unknowns=0;Target=comp155129_c0_seq1 1257 1 .;CDS_Target=comp155129_c0_seq1 828 661 .;locus=RLOC_00004150
ChrX	stalkie_big_nohaplotig	exon	74613944	74615196	99	+	.	Parent=comp155129_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74614600	74614767	.	+	0	Parent=comp155129_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74658636	74659965	.	-	.	ID=FBgn0011207.1.mrna1;geneID=FBgn0011207.1.path1;Name=FBgn0011207.1;Dir=sensecoverage=100.0;identity=99.9;matches=1031;mismatches=0;indels=1;unknowns=0;locus=RLOC_00004150
ChrX	stalkie_big_nohaplotig	exon	74658636	74658816	99	-	.	Parent=FBgn0011207.1.mrna1;Target=FBgn0011207.1 851 1032 +
ChrX	stalkie_big_nohaplotig	exon	74658872	74659349	100	-	.	Parent=FBgn0011207.1.mrna1;Target=FBgn0011207.1 373 850 +
ChrX	stalkie_big_nohaplotig	exon	74659406	74659552	100	-	.	Parent=FBgn0011207.1.mrna1;Target=FBgn0011207.1 226 372 +
ChrX	stalkie_big_nohaplotig	exon	74659625	74659721	100	-	.	Parent=FBgn0011207.1.mrna1;Target=FBgn0011207.1 129 225 +
ChrX	stalkie_big_nohaplotig	exon	74659838	74659965	100	-	.	Parent=FBgn0011207.1.mrna1;Target=FBgn0011207.1 1 128 +
ChrX	stalkie_big_nohaplotig	CDS	74658636	74658816	.	-	2	Parent=FBgn0011207.1.mrna1;Target=FBgn0011207.1 851 1032 +
ChrX	stalkie_big_nohaplotig	CDS	74658872	74659349	.	-	0	Parent=FBgn0011207.1.mrna1;Target=FBgn0011207.1 373 850 +
ChrX	stalkie_big_nohaplotig	CDS	74659406	74659552	.	-	0	Parent=FBgn0011207.1.mrna1;Target=FBgn0011207.1 226 372 +
ChrX	stalkie_big_nohaplotig	CDS	74659625	74659721	.	-	1	Parent=FBgn0011207.1.mrna1;Target=FBgn0011207.1 129 225 +
ChrX	stalkie_big_nohaplotig	CDS	74659838	74659965	.	-	0	Parent=FBgn0011207.1.mrna1;Target=FBgn0011207.1 1 128 +
ChrX	stalkie_big_nohaplotig	mRNA	74698894	74700035	.	+	.	ID=comp143914_c0_seq1.mrna1;geneID=comp143914_c0_seq1.path1;Name=comp143914_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1139;mismatches=1;indels=2;unknowns=0;Target=comp143914_c0_seq1 1140 1 .;CDS_Target=comp143914_c0_seq1 69 1 .;locus=RLOC_00004150
ChrX	stalkie_big_nohaplotig	exon	74698894	74700035	99	+	.	Parent=comp143914_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74698894	74698964	.	+	0	Parent=comp143914_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74715391	74716062	.	+	.	ID=comp93614_c0_seq1.mrna1;geneID=comp93614_c0_seq1.path1;Name=comp93614_c0_seq1;Dir=indeterminatecoverage=98.0;identity=99.9;matches=672;mismatches=0;indels=1;unknowns=0;Target=comp93614_c0_seq1 685 13 .;CDS_Target=comp93614_c0_seq1 188 39 .;locus=RLOC_00004150
ChrX	stalkie_big_nohaplotig	exon	74715391	74716062	99	+	.	Parent=comp93614_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74715417	74715566	.	+	0	Parent=comp93614_c0_seq1.mrna1
ChrX	gffcl	locus	73683171	73684396	.	+	.	ID=RLOC_00004151;geneIDs=comp152796_c0_seq1.path1;transcripts=comp152796_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73683171	73684396	.	+	.	ID=comp152796_c0_seq1.mrna1;geneID=comp152796_c0_seq1.path1;Name=comp152796_c0_seq1;Dir=indeterminatecoverage=98.2;identity=99.8;matches=1223;mismatches=3;indels=0;unknowns=0;Target=comp152796_c0_seq1 1248 23 .;CDS_Target=comp152796_c0_seq1 834 643 .;locus=RLOC_00004151
ChrX	stalkie_big_nohaplotig	exon	73683171	73684396	99	+	.	Parent=comp152796_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	73683791	73683982	.	+	0	Parent=comp152796_c0_seq1.mrna1
ChrX	gffcl	locus	73703599	73703888	.	+	.	ID=RLOC_00004153;geneIDs=comp149321_c0_seq1.path2;transcripts=comp149321_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	73703599	73703888	.	+	.	ID=comp149321_c0_seq1.mrna2;geneID=comp149321_c0_seq1.path2;Name=comp149321_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.2;matches=277;mismatches=10;indels=4;unknowns=0;Target=comp149321_c0_seq1 288 1 .;CDS_Target=comp149321_c0_seq1 281 198 .;locus=RLOC_00004153
ChrX	stalkie_big_nohaplotig	exon	73703599	73703888	95	+	.	Parent=comp149321_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	73703798	73703881	.	+	0	Parent=comp149321_c0_seq1.mrna2
ChrX	gffcl	locus	73706052	73707393	.	+	.	ID=RLOC_00004154;geneIDs=comp162717_c0_seq1.path2;transcripts=comp162717_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	73706052	73707393	.	+	.	ID=comp162717_c0_seq1.mrna2;geneID=comp162717_c0_seq1.path2;Name=comp162717_c0_seq1;Dir=indeterminatecoverage=54.1;identity=99.4;matches=1335;mismatches=7;indels=1;unknowns=0;Target=comp162717_c0_seq1 2481 1139 .;CDS_Target=comp162717_c0_seq1 2302 2150 .;locus=RLOC_00004154
ChrX	stalkie_big_nohaplotig	exon	73706052	73707393	99	+	.	Parent=comp162717_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	73707062	73707214	.	+	0	Parent=comp162717_c0_seq1.mrna2
ChrX	gffcl	locus	73708530	73709746	.	-	.	ID=RLOC_00004155;geneIDs=ORF1129.path1;transcripts=ORF1129.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73708530	73709746	.	-	.	ID=ORF1129.mrna1;geneID=ORF1129.path1;Name=ORF1129;Dir=indeterminatecoverage=99.7;identity=100.0;matches=1217;mismatches=0;indels=0;unknowns=0;Target=ORF1129 1221 5 .;CDS_Target=ORF1129 1221 7 .;locus=RLOC_00004155
ChrX	stalkie_big_nohaplotig	exon	73708530	73709746	100	-	.	Parent=ORF1129.mrna1
ChrX	stalkie_big_nohaplotig	CDS	73708530	73709744	.	-	0	Parent=ORF1129.mrna1
ChrX	gffcl	locus	73712846	73713133	.	-	.	ID=RLOC_00004156;geneIDs=comp149321_c0_seq1.path1;transcripts=comp149321_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73712846	73713133	.	-	.	ID=comp149321_c0_seq1.mrna1;geneID=comp149321_c0_seq1.path1;Name=comp149321_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=282;mismatches=6;indels=0;unknowns=0;Target=comp149321_c0_seq1 288 1 .;CDS_Target=comp149321_c0_seq1 281 198 .;locus=RLOC_00004156
ChrX	stalkie_big_nohaplotig	exon	73712846	73713133	97	-	.	Parent=comp149321_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	73712853	73712936	.	-	0	Parent=comp149321_c0_seq1.mrna1
ChrX	gffcl	locus	73724805	73732867	.	+	.	ID=RLOC_00004157;geneIDs=FBgn0031813.1.path1;transcripts=FBgn0031813.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73724805	73732867	.	+	.	ID=FBgn0031813.1.mrna1;geneID=FBgn0031813.1.path1;Name=FBgn0031813.1;Dir=sensecoverage=100.0;identity=99.5;matches=2097;mismatches=11;indels=0;unknowns=0;locus=RLOC_00004157
ChrX	stalkie_big_nohaplotig	exon	73724805	73724983	100	+	.	Parent=FBgn0031813.1.mrna1;Target=FBgn0031813.1 2 180 +
ChrX	stalkie_big_nohaplotig	exon	73727244	73727381	100	+	.	Parent=FBgn0031813.1.mrna1;Target=FBgn0031813.1 181 318 +
ChrX	stalkie_big_nohaplotig	exon	73727442	73727932	99	+	.	Parent=FBgn0031813.1.mrna1;Target=FBgn0031813.1 319 809 +
ChrX	stalkie_big_nohaplotig	exon	73727985	73728267	100	+	.	Parent=FBgn0031813.1.mrna1;Target=FBgn0031813.1 810 1092 +
ChrX	stalkie_big_nohaplotig	exon	73728336	73728801	99	+	.	Parent=FBgn0031813.1.mrna1;Target=FBgn0031813.1 1093 1558 +
ChrX	stalkie_big_nohaplotig	exon	73728859	73729013	100	+	.	Parent=FBgn0031813.1.mrna1;Target=FBgn0031813.1 1559 1713 +
ChrX	stalkie_big_nohaplotig	exon	73730634	73730921	99	+	.	Parent=FBgn0031813.1.mrna1;Target=FBgn0031813.1 1714 2001 +
ChrX	stalkie_big_nohaplotig	exon	73732760	73732867	97	+	.	Parent=FBgn0031813.1.mrna1;Target=FBgn0031813.1 2002 2109 +
ChrX	stalkie_big_nohaplotig	CDS	73724807	73724983	.	+	0	Parent=FBgn0031813.1.mrna1;Target=FBgn0031813.1 4 180 +
ChrX	stalkie_big_nohaplotig	CDS	73727244	73727381	.	+	0	Parent=FBgn0031813.1.mrna1;Target=FBgn0031813.1 181 318 +
ChrX	stalkie_big_nohaplotig	CDS	73727442	73727932	.	+	0	Parent=FBgn0031813.1.mrna1;Target=FBgn0031813.1 319 809 +
ChrX	stalkie_big_nohaplotig	CDS	73727985	73728267	.	+	1	Parent=FBgn0031813.1.mrna1;Target=FBgn0031813.1 810 1092 +
ChrX	stalkie_big_nohaplotig	CDS	73728336	73728801	.	+	0	Parent=FBgn0031813.1.mrna1;Target=FBgn0031813.1 1093 1558 +
ChrX	stalkie_big_nohaplotig	CDS	73728859	73729013	.	+	2	Parent=FBgn0031813.1.mrna1;Target=FBgn0031813.1 1559 1713 +
ChrX	stalkie_big_nohaplotig	CDS	73730634	73730921	.	+	0	Parent=FBgn0031813.1.mrna1;Target=FBgn0031813.1 1714 2001 +
ChrX	stalkie_big_nohaplotig	CDS	73732760	73732867	.	+	0	Parent=FBgn0031813.1.mrna1;Target=FBgn0031813.1 2002 2109 +
ChrX	gffcl	locus	73736872	73964283	.	+	.	ID=RLOC_00004158;geneIDs=comp157849_c2_seq1.path1;transcripts=comp157849_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73736872	73964283	.	+	.	ID=comp157849_c2_seq1.mrna1;geneID=comp157849_c2_seq1.path1;Name=comp157849_c2_seq1;Dir=sensecoverage=68.9;identity=97.3;matches=769;mismatches=17;indels=4;unknowns=0;Target=comp157849_c2_seq1 919 1056 +;locus=RLOC_00004158
ChrX	stalkie_big_nohaplotig	exon	73736872	73736880	100	+	.	Parent=comp157849_c2_seq1.mrna1;Target=comp157849_c2_seq1 356 364 +
ChrX	stalkie_big_nohaplotig	exon	73737398	73737431	73	+	.	Parent=comp157849_c2_seq1.mrna1;Target=comp157849_c2_seq1 365 394 +
ChrX	stalkie_big_nohaplotig	exon	73871643	73871648	100	+	.	Parent=comp157849_c2_seq1.mrna1;Target=comp157849_c2_seq1 395 400 +
ChrX	stalkie_big_nohaplotig	exon	73963543	73964283	98	+	.	Parent=comp157849_c2_seq1.mrna1;Target=comp157849_c2_seq1 401 1141 +
ChrX	stalkie_big_nohaplotig	CDS	73964061	73964198	.	+	0	Parent=comp157849_c2_seq1.mrna1
ChrX	gffcl	locus	73748426	73761292	.	+	.	ID=RLOC_00004159;geneIDs=FBgn0031813.2.path1;transcripts=FBgn0031813.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73748426	73761292	.	+	.	ID=FBgn0031813.2.mrna1;geneID=FBgn0031813.2.path1;Name=FBgn0031813.2;Dir=sensecoverage=100.0;identity=99.3;matches=2131;mismatches=14;indels=0;unknowns=0;locus=RLOC_00004159
ChrX	stalkie_big_nohaplotig	exon	73748426	73748484	100	+	.	Parent=FBgn0031813.2.mrna1;Target=FBgn0031813.2 1 59 +
ChrX	stalkie_big_nohaplotig	exon	73752459	73752615	100	+	.	Parent=FBgn0031813.2.mrna1;Target=FBgn0031813.2 60 216 +
ChrX	stalkie_big_nohaplotig	exon	73758990	73759127	100	+	.	Parent=FBgn0031813.2.mrna1;Target=FBgn0031813.2 217 354 +
ChrX	stalkie_big_nohaplotig	exon	73759187	73759677	99	+	.	Parent=FBgn0031813.2.mrna1;Target=FBgn0031813.2 355 845 +
ChrX	stalkie_big_nohaplotig	exon	73759733	73760015	98	+	.	Parent=FBgn0031813.2.mrna1;Target=FBgn0031813.2 846 1128 +
ChrX	stalkie_big_nohaplotig	exon	73760080	73760545	98	+	.	Parent=FBgn0031813.2.mrna1;Target=FBgn0031813.2 1129 1594 +
ChrX	stalkie_big_nohaplotig	exon	73760606	73760760	99	+	.	Parent=FBgn0031813.2.mrna1;Target=FBgn0031813.2 1595 1749 +
ChrX	stalkie_big_nohaplotig	exon	73760830	73761117	99	+	.	Parent=FBgn0031813.2.mrna1;Target=FBgn0031813.2 1750 2037 +
ChrX	stalkie_big_nohaplotig	exon	73761185	73761292	99	+	.	Parent=FBgn0031813.2.mrna1;Target=FBgn0031813.2 2038 2145 +
ChrX	stalkie_big_nohaplotig	CDS	73748426	73748484	.	+	0	Parent=FBgn0031813.2.mrna1;Target=FBgn0031813.2 1 59 +
ChrX	stalkie_big_nohaplotig	CDS	73752459	73752615	.	+	1	Parent=FBgn0031813.2.mrna1;Target=FBgn0031813.2 60 216 +
ChrX	stalkie_big_nohaplotig	CDS	73758990	73759127	.	+	0	Parent=FBgn0031813.2.mrna1;Target=FBgn0031813.2 217 354 +
ChrX	stalkie_big_nohaplotig	CDS	73759187	73759677	.	+	0	Parent=FBgn0031813.2.mrna1;Target=FBgn0031813.2 355 845 +
ChrX	stalkie_big_nohaplotig	CDS	73759733	73760015	.	+	1	Parent=FBgn0031813.2.mrna1;Target=FBgn0031813.2 846 1128 +
ChrX	stalkie_big_nohaplotig	CDS	73760080	73760545	.	+	0	Parent=FBgn0031813.2.mrna1;Target=FBgn0031813.2 1129 1594 +
ChrX	stalkie_big_nohaplotig	CDS	73760606	73760760	.	+	2	Parent=FBgn0031813.2.mrna1;Target=FBgn0031813.2 1595 1749 +
ChrX	stalkie_big_nohaplotig	CDS	73760830	73761117	.	+	0	Parent=FBgn0031813.2.mrna1;Target=FBgn0031813.2 1750 2037 +
ChrX	stalkie_big_nohaplotig	CDS	73761185	73761292	.	+	0	Parent=FBgn0031813.2.mrna1;Target=FBgn0031813.2 2038 2145 +
ChrX	gffcl	locus	73765294	73767673	.	-	.	ID=RLOC_00004160;geneIDs=FBgn0263278.1.path1;transcripts=FBgn0263278.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73765294	73767673	.	-	.	ID=FBgn0263278.1.mrna1;geneID=FBgn0263278.1.path1;Name=FBgn0263278.1;Dir=sensecoverage=100.0;identity=99.8;matches=1572;mismatches=3;indels=0;unknowns=0;locus=RLOC_00004160
ChrX	stalkie_big_nohaplotig	exon	73765294	73765618	99	-	.	Parent=FBgn0263278.1.mrna1;Target=FBgn0263278.1 1251 1575 +
ChrX	stalkie_big_nohaplotig	exon	73765687	73765824	100	-	.	Parent=FBgn0263278.1.mrna1;Target=FBgn0263278.1 1113 1250 +
ChrX	stalkie_big_nohaplotig	exon	73766420	73766623	100	-	.	Parent=FBgn0263278.1.mrna1;Target=FBgn0263278.1 909 1112 +
ChrX	stalkie_big_nohaplotig	exon	73766702	73767048	100	-	.	Parent=FBgn0263278.1.mrna1;Target=FBgn0263278.1 562 908 +
ChrX	stalkie_big_nohaplotig	exon	73767113	73767673	99	-	.	Parent=FBgn0263278.1.mrna1;Target=FBgn0263278.1 1 561 +
ChrX	stalkie_big_nohaplotig	CDS	73765294	73765618	.	-	1	Parent=FBgn0263278.1.mrna1;Target=FBgn0263278.1 1251 1575 +
ChrX	stalkie_big_nohaplotig	CDS	73765687	73765824	.	-	1	Parent=FBgn0263278.1.mrna1;Target=FBgn0263278.1 1113 1250 +
ChrX	stalkie_big_nohaplotig	CDS	73766420	73766623	.	-	1	Parent=FBgn0263278.1.mrna1;Target=FBgn0263278.1 909 1112 +
ChrX	stalkie_big_nohaplotig	CDS	73766702	73767048	.	-	0	Parent=FBgn0263278.1.mrna1;Target=FBgn0263278.1 562 908 +
ChrX	stalkie_big_nohaplotig	CDS	73767113	73767673	.	-	0	Parent=FBgn0263278.1.mrna1;Target=FBgn0263278.1 1 561 +
ChrX	gffcl	locus	73800899	73808395	.	+	.	ID=RLOC_00004161;geneIDs=FBgn0011722.1.path1;transcripts=FBgn0011722.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73800899	73808395	.	+	.	ID=FBgn0011722.1.mrna1;geneID=FBgn0011722.1.path1;Name=FBgn0011722.1;Dir=sensecoverage=100.0;identity=99.7;matches=7331;mismatches=13;indels=12;unknowns=0;locus=RLOC_00004161
ChrX	stalkie_big_nohaplotig	exon	73800899	73801196	99	+	.	Parent=FBgn0011722.1.mrna1;Target=FBgn0011722.1 1 298 +
ChrX	stalkie_big_nohaplotig	exon	73801261	73808234	99	+	.	Parent=FBgn0011722.1.mrna1;Target=FBgn0011722.1 299 7272 +
ChrX	stalkie_big_nohaplotig	exon	73808318	73808395	100	+	.	Parent=FBgn0011722.1.mrna1;Target=FBgn0011722.1 7273 7350 +
ChrX	stalkie_big_nohaplotig	CDS	73800899	73801196	.	+	0	Parent=FBgn0011722.1.mrna1;Target=FBgn0011722.1 1 298 +
ChrX	stalkie_big_nohaplotig	CDS	73801261	73808234	.	+	2	Parent=FBgn0011722.1.mrna1;Target=FBgn0011722.1 299 7272 +
ChrX	stalkie_big_nohaplotig	CDS	73808318	73808395	.	+	0	Parent=FBgn0011722.1.mrna1;Target=FBgn0011722.1 7273 7350 +
ChrX	gffcl	locus	73810510	73810768	.	-	.	ID=RLOC_00004162;geneIDs=comp119150_c0_seq1.path1;transcripts=comp119150_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73810510	73810768	.	-	.	ID=comp119150_c0_seq1.mrna1;geneID=comp119150_c0_seq1.path1;Name=comp119150_c0_seq1;Dir=indeterminatecoverage=98.9;identity=98.8;matches=257;mismatches=2;indels=1;unknowns=0;Target=comp119150_c0_seq1 262 3 .;CDS_Target=comp119150_c0_seq1 256 209 .;locus=RLOC_00004162
ChrX	stalkie_big_nohaplotig	exon	73810510	73810768	98	-	.	Parent=comp119150_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	73810516	73810563	.	-	0	Parent=comp119150_c0_seq1.mrna1
ChrX	gffcl	locus	73811538	73812056	.	-	.	ID=RLOC_00004163;geneIDs=comp155514_c0_seq1.path1;transcripts=comp155514_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73811538	73812056	.	-	.	ID=comp155514_c0_seq1.mrna1;geneID=comp155514_c0_seq1.path1;Name=comp155514_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=506;mismatches=12;indels=1;unknowns=0;Target=comp155514_c0_seq1 518 1 .;CDS_Target=comp155514_c0_seq1 432 337 .;locus=RLOC_00004163
ChrX	stalkie_big_nohaplotig	exon	73811538	73812056	97	-	.	Parent=comp155514_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	73811624	73811720	.	-	0	Parent=comp155514_c0_seq1.mrna1
ChrX	gffcl	locus	73812434	73812917	.	-	.	ID=RLOC_00004164;geneIDs=comp143129_c0_seq1.path1;transcripts=comp143129_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73812434	73812917	.	-	.	ID=comp143129_c0_seq1.mrna1;geneID=comp143129_c0_seq1.path1;Name=comp143129_c0_seq1;Dir=indeterminatecoverage=98.2;identity=97.7;matches=473;mismatches=11;indels=0;unknowns=0;Target=comp143129_c0_seq1 484 1 .;CDS_Target=comp143129_c0_seq1 482 339 .;locus=RLOC_00004164
ChrX	stalkie_big_nohaplotig	exon	73812434	73812917	97	-	.	Parent=comp143129_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	73812436	73812579	.	-	0	Parent=comp143129_c0_seq1.mrna1
ChrX	gffcl	locus	73828134	73829173	.	-	.	ID=RLOC_00004165;geneIDs=comp158217_c0_seq1.path1;transcripts=comp158217_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73828134	73829173	.	-	.	ID=comp158217_c0_seq1.mrna1;geneID=comp158217_c0_seq1.path1;Name=comp158217_c0_seq1;Dir=antisensecoverage=100.0;identity=94.7;matches=880;mismatches=31;indels=18;unknowns=0;locus=RLOC_00004165
ChrX	stalkie_big_nohaplotig	exon	73828134	73828643	92	-	.	Parent=comp158217_c0_seq1.mrna1;Target=comp158217_c0_seq1 1 525 -
ChrX	stalkie_big_nohaplotig	exon	73828710	73828808	100	-	.	Parent=comp158217_c0_seq1.mrna1;Target=comp158217_c0_seq1 526 624 -
ChrX	stalkie_big_nohaplotig	exon	73828872	73829173	97	-	.	Parent=comp158217_c0_seq1.mrna1;Target=comp158217_c0_seq1 625 929 -
ChrX	stalkie_big_nohaplotig	CDS	73828443	73828643	.	-	0	Parent=comp158217_c0_seq1.mrna1;Target=comp158217_c0_seq1 325 525 .
ChrX	stalkie_big_nohaplotig	CDS	73828710	73828808	.	-	0	Parent=comp158217_c0_seq1.mrna1;Target=comp158217_c0_seq1 526 624 .
ChrX	stalkie_big_nohaplotig	CDS	73828872	73829078	.	-	0	Parent=comp158217_c0_seq1.mrna1;Target=comp158217_c0_seq1 625 831 .
ChrX	gffcl	locus	73835233	73835722	.	+	.	ID=RLOC_00004166;geneIDs=comp143588_c0_seq1.path1;transcripts=comp143588_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73835233	73835722	.	+	.	ID=comp143588_c0_seq1.mrna1;geneID=comp143588_c0_seq1.path1;Name=comp143588_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=490;mismatches=0;indels=0;unknowns=0;Target=comp143588_c0_seq1 490 1 .;CDS_Target=comp143588_c0_seq1 142 2 .;locus=RLOC_00004166
ChrX	stalkie_big_nohaplotig	exon	73835233	73835722	100	+	.	Parent=comp143588_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	73835234	73835374	.	+	0	Parent=comp143588_c0_seq1.mrna1
ChrX	gffcl	locus	73846636	73847609	.	+	.	ID=RLOC_00004167;geneIDs=comp161295_c0_seq1.path2;transcripts=comp161295_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	73846636	73847609	.	+	.	ID=comp161295_c0_seq1.mrna2;geneID=comp161295_c0_seq1.path2;Name=comp161295_c0_seq1;Dir=sensecoverage=100.0;identity=96.4;matches=892;mismatches=26;indels=7;unknowns=0;Target=comp161295_c0_seq1 1 129 +;locus=RLOC_00004167
ChrX	stalkie_big_nohaplotig	exon	73846636	73847295	95	+	.	Parent=comp161295_c0_seq1.mrna2;Target=comp161295_c0_seq1 1 663 +
ChrX	stalkie_big_nohaplotig	exon	73847350	73847609	98	+	.	Parent=comp161295_c0_seq1.mrna2;Target=comp161295_c0_seq1 664 923 +
ChrX	stalkie_big_nohaplotig	CDS	73846636	73846766	.	+	0	Parent=comp161295_c0_seq1.mrna2
ChrX	gffcl	locus	73863963	74371455	.	-	.	ID=RLOC_00004168;geneIDs=comp158110_c0_seq1.path2;transcripts=comp158110_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	73863963	74371455	.	-	.	ID=comp158110_c0_seq1.mrna2;geneID=comp158110_c0_seq1.path2;Name=comp158110_c0_seq1;Dir=indeterminatecoverage=35.8;identity=97.6;matches=563;mismatches=13;indels=1;unknowns=0;Target=comp158110_c0_seq1 393 307 .;locus=RLOC_00004168
ChrX	stalkie_big_nohaplotig	exon	73863963	73864018	87	-	.	Parent=comp158110_c0_seq1.mrna2;Target=comp158110_c0_seq1 576 522 .
ChrX	stalkie_big_nohaplotig	exon	73869804	73869816	76	-	.	Parent=comp158110_c0_seq1.mrna2;Target=comp158110_c0_seq1 521 509 .
ChrX	stalkie_big_nohaplotig	exon	74370948	74371455	99	-	.	Parent=comp158110_c0_seq1.mrna2;Target=comp158110_c0_seq1 508 1 .
ChrX	stalkie_big_nohaplotig	CDS	74371063	74371149	.	-	0	Parent=comp158110_c0_seq1.mrna2
ChrX	gffcl	locus	73865161	73866036	.	+	.	ID=RLOC_00004169;geneIDs=ORF2326.path1;transcripts=ORF2326.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73865161	73866036	.	+	.	ID=ORF2326.mrna1;geneID=ORF2326.path1;Name=ORF2326;Dir=indeterminatecoverage=100.0;identity=99.3;matches=870;mismatches=6;indels=0;unknowns=0;Target=ORF2326 876 1 .;locus=RLOC_00004169
ChrX	stalkie_big_nohaplotig	exon	73865161	73866036	99	+	.	Parent=ORF2326.mrna1
ChrX	stalkie_big_nohaplotig	CDS	73865161	73866036	.	+	0	Parent=ORF2326.mrna1
ChrX	gffcl	locus	73883970	73884941	.	-	.	ID=RLOC_00004170;geneIDs=comp161295_c0_seq1.path1;transcripts=comp161295_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73883970	73884941	.	-	.	ID=comp161295_c0_seq1.mrna1;geneID=comp161295_c0_seq1.path1;Name=comp161295_c0_seq1;Dir=sensecoverage=100.0;identity=96.7;matches=893;mismatches=25;indels=5;unknowns=0;Target=comp161295_c0_seq1 2 454 +;locus=RLOC_00004170
ChrX	stalkie_big_nohaplotig	exon	73883970	73884229	95	-	.	Parent=comp161295_c0_seq1.mrna1;Target=comp161295_c0_seq1 664 923 +
ChrX	stalkie_big_nohaplotig	exon	73884284	73884941	97	-	.	Parent=comp161295_c0_seq1.mrna1;Target=comp161295_c0_seq1 1 663 +
ChrX	stalkie_big_nohaplotig	CDS	73884488	73884940	.	-	0	Parent=comp161295_c0_seq1.mrna1
ChrX	gffcl	locus	73922304	73924205	.	-	.	ID=RLOC_00004171;geneIDs=comp156916_c1_seq1.path1;transcripts=comp156916_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73922304	73924205	.	-	.	ID=comp156916_c1_seq1.mrna1;geneID=comp156916_c1_seq1.path1;Name=comp156916_c1_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=1593;mismatches=9;indels=0;unknowns=0;locus=RLOC_00004171
ChrX	stalkie_big_nohaplotig	exon	73922304	73923772	99	-	.	Parent=comp156916_c1_seq1.mrna1;Target=comp156916_c1_seq1 1 1469 -
ChrX	stalkie_big_nohaplotig	exon	73924073	73924205	100	-	.	Parent=comp156916_c1_seq1.mrna1;Target=comp156916_c1_seq1 1470 1602 -
ChrX	stalkie_big_nohaplotig	CDS	73922582	73923772	.	-	0	Parent=comp156916_c1_seq1.mrna1;Target=comp156916_c1_seq1 279 1469 .
ChrX	stalkie_big_nohaplotig	CDS	73924073	73924126	.	-	0	Parent=comp156916_c1_seq1.mrna1;Target=comp156916_c1_seq1 1470 1523 .
ChrX	gffcl	locus	73955925	73956716	.	+	.	ID=RLOC_00004172;geneIDs=ORF2883.path1;transcripts=ORF2883.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73955925	73956716	.	+	.	ID=ORF2883.mrna1;geneID=ORF2883.path1;Name=ORF2883;Dir=indeterminatecoverage=100.0;identity=99.6;matches=789;mismatches=3;indels=0;unknowns=0;Target=ORF2883 792 1 .;locus=RLOC_00004172
ChrX	stalkie_big_nohaplotig	exon	73955925	73956716	99	+	.	Parent=ORF2883.mrna1
ChrX	stalkie_big_nohaplotig	CDS	73955925	73956716	.	+	0	Parent=ORF2883.mrna1
ChrX	gffcl	locus	73959433	73960935	.	-	.	ID=RLOC_00004173;geneIDs=comp155060_c0_seq1.path1;transcripts=comp155060_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73959433	73960935	.	-	.	ID=comp155060_c0_seq1.mrna1;geneID=comp155060_c0_seq1.path1;Name=comp155060_c0_seq1;Dir=antisensecoverage=99.9;identity=99.4;matches=1216;mismatches=7;indels=0;unknowns=0;locus=RLOC_00004173
ChrX	stalkie_big_nohaplotig	exon	73959433	73959607	98	-	.	Parent=comp155060_c0_seq1.mrna1;Target=comp155060_c0_seq1 2 176 -
ChrX	stalkie_big_nohaplotig	exon	73959666	73959855	99	-	.	Parent=comp155060_c0_seq1.mrna1;Target=comp155060_c0_seq1 177 366 -
ChrX	stalkie_big_nohaplotig	exon	73960024	73960311	98	-	.	Parent=comp155060_c0_seq1.mrna1;Target=comp155060_c0_seq1 367 654 -
ChrX	stalkie_big_nohaplotig	exon	73960366	73960935	99	-	.	Parent=comp155060_c0_seq1.mrna1;Target=comp155060_c0_seq1 655 1224 -
ChrX	stalkie_big_nohaplotig	CDS	73960299	73960311	.	-	1	Parent=comp155060_c0_seq1.mrna1;Target=comp155060_c0_seq1 642 654 .
ChrX	stalkie_big_nohaplotig	CDS	73960366	73960772	.	-	0	Parent=comp155060_c0_seq1.mrna1;Target=comp155060_c0_seq1 655 1061 .
ChrX	gffcl	locus	73961545	73962421	.	-	.	ID=RLOC_00004174;geneIDs=comp151539_c0_seq1.path1;transcripts=comp151539_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73961545	73962421	.	-	.	ID=comp151539_c0_seq1.mrna1;geneID=comp151539_c0_seq1.path1;Name=comp151539_c0_seq1;Dir=indeterminatecoverage=97.9;identity=99.4;matches=872;mismatches=5;indels=0;unknowns=0;Target=comp151539_c0_seq1 895 19 .;CDS_Target=comp151539_c0_seq1 743 105 .;locus=RLOC_00004174
ChrX	stalkie_big_nohaplotig	exon	73961545	73962421	99	-	.	Parent=comp151539_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	73961697	73962335	.	-	0	Parent=comp151539_c0_seq1.mrna1
ChrX	gffcl	locus	73990636	74015225	.	-	.	ID=RLOC_00004175;geneIDs=FBgn0041180.1.path1;transcripts=FBgn0041180.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	73990636	74015225	.	-	.	ID=FBgn0041180.1.mrna1;geneID=FBgn0041180.1.path1;Name=FBgn0041180.1;Dir=sensecoverage=100.0;identity=99.3;matches=4386;mismatches=30;indels=0;unknowns=0;locus=RLOC_00004175
ChrX	stalkie_big_nohaplotig	exon	73990636	73990878	100	-	.	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 4174 4416 +
ChrX	stalkie_big_nohaplotig	exon	73991042	73991332	99	-	.	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 3883 4173 +
ChrX	stalkie_big_nohaplotig	exon	73991402	73991944	99	-	.	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 3340 3882 +
ChrX	stalkie_big_nohaplotig	exon	73992009	73992371	100	-	.	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 2977 3339 +
ChrX	stalkie_big_nohaplotig	exon	73992443	73992981	99	-	.	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 2438 2976 +
ChrX	stalkie_big_nohaplotig	exon	73993043	73993221	98	-	.	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 2259 2437 +
ChrX	stalkie_big_nohaplotig	exon	73993334	73993830	98	-	.	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 1762 2258 +
ChrX	stalkie_big_nohaplotig	exon	73993891	73994155	99	-	.	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 1497 1761 +
ChrX	stalkie_big_nohaplotig	exon	73995023	73995766	98	-	.	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 753 1496 +
ChrX	stalkie_big_nohaplotig	exon	73997850	73998103	100	-	.	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 499 752 +
ChrX	stalkie_big_nohaplotig	exon	73998168	73998582	99	-	.	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 84 498 +
ChrX	stalkie_big_nohaplotig	exon	74015143	74015225	96	-	.	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 1 83 +
ChrX	stalkie_big_nohaplotig	CDS	73990636	73990878	.	-	0	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 4174 4416 +
ChrX	stalkie_big_nohaplotig	CDS	73991042	73991332	.	-	0	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 3883 4173 +
ChrX	stalkie_big_nohaplotig	CDS	73991402	73991944	.	-	0	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 3340 3882 +
ChrX	stalkie_big_nohaplotig	CDS	73992009	73992371	.	-	0	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 2977 3339 +
ChrX	stalkie_big_nohaplotig	CDS	73992443	73992981	.	-	2	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 2438 2976 +
ChrX	stalkie_big_nohaplotig	CDS	73993043	73993221	.	-	1	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 2259 2437 +
ChrX	stalkie_big_nohaplotig	CDS	73993334	73993830	.	-	0	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 1762 2258 +
ChrX	stalkie_big_nohaplotig	CDS	73993891	73994155	.	-	1	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 1497 1761 +
ChrX	stalkie_big_nohaplotig	CDS	73995023	73995766	.	-	1	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 753 1496 +
ChrX	stalkie_big_nohaplotig	CDS	73997850	73998103	.	-	0	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 499 752 +
ChrX	stalkie_big_nohaplotig	CDS	73998168	73998582	.	-	1	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 84 498 +
ChrX	stalkie_big_nohaplotig	CDS	74015143	74015225	.	-	0	Parent=FBgn0041180.1.mrna1;Target=FBgn0041180.1 1 83 +
ChrX	gffcl	locus	74021795	74022480	.	+	.	ID=RLOC_00004176;geneIDs=comp154808_c0_seq1.path1;transcripts=comp154808_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74021795	74022480	.	+	.	ID=comp154808_c0_seq1.mrna1;geneID=comp154808_c0_seq1.path1;Name=comp154808_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.4;matches=675;mismatches=11;indels=0;unknowns=0;Target=comp154808_c0_seq1 686 1 .;CDS_Target=comp154808_c0_seq1 553 356 .;locus=RLOC_00004176
ChrX	stalkie_big_nohaplotig	exon	74021795	74022480	98	+	.	Parent=comp154808_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74022150	74022347	.	+	0	Parent=comp154808_c0_seq1.mrna1
ChrX	gffcl	locus	74079356	74080297	.	+	.	ID=RLOC_00004177;geneIDs=comp158082_c0_seq1.path1;transcripts=comp158082_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74079356	74080297	.	+	.	ID=comp158082_c0_seq1.mrna1;geneID=comp158082_c0_seq1.path1;Name=comp158082_c0_seq1;Dir=indeterminatecoverage=96.9;identity=96.3;matches=887;mismatches=28;indels=6;unknowns=0;Target=comp158082_c0_seq1 60 28 .;locus=RLOC_00004177
ChrX	stalkie_big_nohaplotig	exon	74079356	74079973	97	+	.	Parent=comp158082_c0_seq1.mrna1;Target=comp158082_c0_seq1 643 26 .
ChrX	stalkie_big_nohaplotig	exon	74080001	74080297	94	+	.	Parent=comp158082_c0_seq1.mrna1;Target=comp158082_c0_seq1 961 659 .
ChrX	stalkie_big_nohaplotig	CDS	74079358	74079390	.	+	0	Parent=comp158082_c0_seq1.mrna1
ChrX	gffcl	locus	74086711	74087392	.	-	.	ID=RLOC_00004178;geneIDs=comp153689_c0_seq1.path1;transcripts=comp153689_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74086711	74087392	.	-	.	ID=comp153689_c0_seq1.mrna1;geneID=comp153689_c0_seq1.path1;Name=comp153689_c0_seq1;Dir=indeterminatecoverage=93.1;identity=97.0;matches=669;mismatches=13;indels=8;unknowns=0;Target=comp153689_c0_seq1 740 51 .;CDS_Target=comp153689_c0_seq1 704 588 .;locus=RLOC_00004178
ChrX	stalkie_big_nohaplotig	exon	74086711	74087392	96	-	.	Parent=comp153689_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74086747	74086863	.	-	0	Parent=comp153689_c0_seq1.mrna1
ChrX	gffcl	locus	74129479	74131557	.	+	.	ID=RLOC_00004179;geneIDs=FBgn0031805.1.path1;transcripts=FBgn0031805.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74129479	74131557	.	+	.	ID=FBgn0031805.1.mrna1;geneID=FBgn0031805.1.path1;Name=FBgn0031805.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=2075;mismatches=4;indels=0;unknowns=0;Target=FBgn0031805.1 2079 1 .;locus=RLOC_00004179
ChrX	stalkie_big_nohaplotig	exon	74129479	74131557	99	+	.	Parent=FBgn0031805.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74129479	74131557	.	+	0	Parent=FBgn0031805.1.mrna1
ChrX	gffcl	locus	74149549	74150097	.	-	.	ID=RLOC_00004180;geneIDs=comp126675_c0_seq1.path1;transcripts=comp126675_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74149549	74150097	.	-	.	ID=comp126675_c0_seq1.mrna1;geneID=comp126675_c0_seq1.path1;Name=comp126675_c0_seq1;Dir=indeterminatecoverage=96.3;identity=97.1;matches=533;mismatches=9;indels=7;unknowns=0;Target=comp126675_c0_seq1 563 22 .;CDS_Target=comp126675_c0_seq1 346 23 .;locus=RLOC_00004180
ChrX	stalkie_big_nohaplotig	exon	74149549	74150097	97	-	.	Parent=comp126675_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74149773	74150096	.	-	0	Parent=comp126675_c0_seq1.mrna1
ChrX	gffcl	locus	74153332	74154248	.	+	.	ID=RLOC_00004181;geneIDs=FBgn0032160.1.path1;transcripts=FBgn0032160.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74153332	74154248	.	+	.	ID=FBgn0032160.1.mrna1;geneID=FBgn0032160.1.path1;Name=FBgn0032160.1;Dir=indeterminatecoverage=99.9;identity=99.7;matches=914;mismatches=3;indels=0;unknowns=0;Target=FBgn0032160.1 918 2 .;CDS_Target=FBgn0032160.1 918 4 .;locus=RLOC_00004181
ChrX	stalkie_big_nohaplotig	exon	74153332	74154248	99	+	.	Parent=FBgn0032160.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74153334	74154248	.	+	0	Parent=FBgn0032160.1.mrna1
ChrX	gffcl	locus	74164410	74166425	.	+	.	ID=RLOC_00004182;geneIDs=FBgn0031808.1.path1;transcripts=FBgn0031808.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74164410	74166425	.	+	.	ID=FBgn0031808.1.mrna1;geneID=FBgn0031808.1.path1;Name=FBgn0031808.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2016;mismatches=0;indels=0;unknowns=0;Target=FBgn0031808.1 2016 1 .;locus=RLOC_00004182
ChrX	stalkie_big_nohaplotig	exon	74164410	74166425	100	+	.	Parent=FBgn0031808.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74164410	74166425	.	+	0	Parent=FBgn0031808.1.mrna1
ChrX	gffcl	locus	74173976	74174196	.	-	.	ID=RLOC_00004183;geneIDs=comp139401_c0_seq1.path1;transcripts=comp139401_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74173976	74174196	.	-	.	ID=comp139401_c0_seq1.mrna1;geneID=comp139401_c0_seq1.path1;Name=comp139401_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=220;mismatches=0;indels=1;unknowns=0;Target=comp139401_c0_seq1 220 1 .;CDS_Target=comp139401_c0_seq1 62 3 .;locus=RLOC_00004183
ChrX	stalkie_big_nohaplotig	exon	74173976	74174196	99	-	.	Parent=comp139401_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74174134	74174194	.	-	0	Parent=comp139401_c0_seq1.mrna1
ChrX	gffcl	locus	74174513	74175038	.	+	.	ID=RLOC_00004184;geneIDs=comp150229_c0_seq1.path1;transcripts=comp150229_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74174513	74175038	.	+	.	ID=comp150229_c0_seq1.mrna1;geneID=comp150229_c0_seq1.path1;Name=comp150229_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=519;mismatches=7;indels=7;unknowns=0;Target=comp150229_c0_seq1 533 1 .;CDS_Target=comp150229_c0_seq1 300 238 .;locus=RLOC_00004184
ChrX	stalkie_big_nohaplotig	exon	74174513	74175038	97	+	.	Parent=comp150229_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74174747	74174805	.	+	0	Parent=comp150229_c0_seq1.mrna1
ChrX	gffcl	locus	74175555	74176037	.	+	.	ID=RLOC_00004185;geneIDs=comp153212_c0_seq1.path1;transcripts=comp153212_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74175555	74176037	.	+	.	ID=comp153212_c0_seq1.mrna1;geneID=comp153212_c0_seq1.path1;Name=comp153212_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=479;mismatches=4;indels=1;unknowns=0;Target=comp153212_c0_seq1 484 1 .;CDS_Target=comp153212_c0_seq1 237 142 .;locus=RLOC_00004185
ChrX	stalkie_big_nohaplotig	exon	74175555	74176037	98	+	.	Parent=comp153212_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74175695	74175790	.	+	0	Parent=comp153212_c0_seq1.mrna1
ChrX	gffcl	locus	74182225	74326691	.	-	.	ID=RLOC_00004186;geneIDs=FBgn0259714.1.path1;transcripts=FBgn0259714.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74182225	74326691	.	-	.	ID=FBgn0259714.1.mrna1;geneID=FBgn0259714.1.path1;Name=FBgn0259714.1;Dir=sensecoverage=82.0;identity=99.9;matches=1177;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004186
ChrX	stalkie_big_nohaplotig	exon	74182225	74182466	100	-	.	Parent=FBgn0259714.1.mrna1;Target=FBgn0259714.1 1196 1437 +
ChrX	stalkie_big_nohaplotig	exon	74182879	74183013	100	-	.	Parent=FBgn0259714.1.mrna1;Target=FBgn0259714.1 1061 1195 +
ChrX	stalkie_big_nohaplotig	exon	74200279	74200421	100	-	.	Parent=FBgn0259714.1.mrna1;Target=FBgn0259714.1 918 1060 +
ChrX	stalkie_big_nohaplotig	exon	74254686	74254836	100	-	.	Parent=FBgn0259714.1.mrna1;Target=FBgn0259714.1 767 917 +
ChrX	stalkie_big_nohaplotig	exon	74254947	74255075	99	-	.	Parent=FBgn0259714.1.mrna1;Target=FBgn0259714.1 638 766 +
ChrX	stalkie_big_nohaplotig	exon	74271246	74271404	100	-	.	Parent=FBgn0259714.1.mrna1;Target=FBgn0259714.1 479 637 +
ChrX	stalkie_big_nohaplotig	exon	74326473	74326691	100	-	.	Parent=FBgn0259714.1.mrna1;Target=FBgn0259714.1 260 478 +
ChrX	stalkie_big_nohaplotig	CDS	74182225	74182466	.	-	2	Parent=FBgn0259714.1.mrna1;Target=FBgn0259714.1 1196 1437 +
ChrX	stalkie_big_nohaplotig	CDS	74182879	74183013	.	-	2	Parent=FBgn0259714.1.mrna1;Target=FBgn0259714.1 1061 1195 +
ChrX	stalkie_big_nohaplotig	CDS	74200279	74200421	.	-	1	Parent=FBgn0259714.1.mrna1;Target=FBgn0259714.1 918 1060 +
ChrX	stalkie_big_nohaplotig	CDS	74254686	74254836	.	-	2	Parent=FBgn0259714.1.mrna1;Target=FBgn0259714.1 767 917 +
ChrX	stalkie_big_nohaplotig	CDS	74254947	74255075	.	-	2	Parent=FBgn0259714.1.mrna1;Target=FBgn0259714.1 638 766 +
ChrX	stalkie_big_nohaplotig	CDS	74271246	74271404	.	-	2	Parent=FBgn0259714.1.mrna1;Target=FBgn0259714.1 479 637 +
ChrX	stalkie_big_nohaplotig	CDS	74326473	74326689	.	-	0	Parent=FBgn0259714.1.mrna1;Target=FBgn0259714.1 262 478 +
ChrX	gffcl	locus	74192384	74194629	.	-	.	ID=RLOC_00004187;geneIDs=comp130619_c0_seq1.path1;transcripts=comp130619_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74192384	74194629	.	-	.	ID=comp130619_c0_seq1.mrna1;geneID=comp130619_c0_seq1.path1;Name=comp130619_c0_seq1;Dir=indeterminatecoverage=96.1;identity=97.0;matches=554;mismatches=17;indels=0;unknowns=0;locus=RLOC_00004187
ChrX	stalkie_big_nohaplotig	exon	74192384	74192615	96	-	.	Parent=comp130619_c0_seq1.mrna1;Target=comp130619_c0_seq1 571 340 .
ChrX	stalkie_big_nohaplotig	exon	74192690	74192836	96	-	.	Parent=comp130619_c0_seq1.mrna1;Target=comp130619_c0_seq1 339 193 .
ChrX	stalkie_big_nohaplotig	exon	74192964	74193052	96	-	.	Parent=comp130619_c0_seq1.mrna1;Target=comp130619_c0_seq1 192 104 .
ChrX	stalkie_big_nohaplotig	exon	74194527	74194629	100	-	.	Parent=comp130619_c0_seq1.mrna1;Target=comp130619_c0_seq1 103 1 .
ChrX	stalkie_big_nohaplotig	CDS	74192795	74192836	.	-	0	Parent=comp130619_c0_seq1.mrna1;Target=comp130619_c0_seq1 234 193 .
ChrX	stalkie_big_nohaplotig	CDS	74192964	74193052	.	-	2	Parent=comp130619_c0_seq1.mrna1;Target=comp130619_c0_seq1 192 104 .
ChrX	stalkie_big_nohaplotig	CDS	74194527	74194602	.	-	0	Parent=comp130619_c0_seq1.mrna1;Target=comp130619_c0_seq1 103 28 .
ChrX	gffcl	locus	74196795	75087481	.	.	.	ID=RLOC_00004188;geneIDs=comp117783_c0_seq1.path1,comp149789_c0_seq1.path1;transcripts=comp149789_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74196795	75086966	.	-	.	ID=comp149789_c0_seq1.mrna1;geneID=comp149789_c0_seq1.path1;Name=comp149789_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=813;mismatches=0;indels=5;unknowns=0;Target=comp149789_c0_seq1 36 1 .;locus=RLOC_00004188
ChrX	stalkie_big_nohaplotig	exon	74196795	74196817	100	-	.	Parent=comp149789_c0_seq1.mrna1;Target=comp149789_c0_seq1 818 796 .
ChrX	stalkie_big_nohaplotig	exon	74198502	74198505	100	-	.	Parent=comp149789_c0_seq1.mrna1;Target=comp149789_c0_seq1 795 792 .
ChrX	stalkie_big_nohaplotig	exon	74199850	74199856	100	-	.	Parent=comp149789_c0_seq1.mrna1;Target=comp149789_c0_seq1 791 785 .
ChrX	stalkie_big_nohaplotig	exon	74203199	74203201	100	-	.	Parent=comp149789_c0_seq1.mrna1;Target=comp149789_c0_seq1 784 782 .
ChrX	stalkie_big_nohaplotig	exon	74207052	74207061	100	-	.	Parent=comp149789_c0_seq1.mrna1;Target=comp149789_c0_seq1 781 772 .
ChrX	stalkie_big_nohaplotig	exon	74216555	74216558	100	-	.	Parent=comp149789_c0_seq1.mrna1;Target=comp149789_c0_seq1 771 768 .
ChrX	stalkie_big_nohaplotig	exon	74224336	74224337	100	-	.	Parent=comp149789_c0_seq1.mrna1;Target=comp149789_c0_seq1 767 766 .
ChrX	stalkie_big_nohaplotig	exon	74229906	74229908	100	-	.	Parent=comp149789_c0_seq1.mrna1;Target=comp149789_c0_seq1 765 763 .
ChrX	stalkie_big_nohaplotig	exon	74238081	74238085	100	-	.	Parent=comp149789_c0_seq1.mrna1;Target=comp149789_c0_seq1 762 758 .
ChrX	stalkie_big_nohaplotig	exon	75086215	75086966	99	-	.	Parent=comp149789_c0_seq1.mrna1;Target=comp149789_c0_seq1 757 1 .
ChrX	stalkie_big_nohaplotig	CDS	75086931	75086966	.	-	0	Parent=comp149789_c0_seq1.mrna1
ChrX	gffcl	locus	74207581	74209806	.	+	.	ID=RLOC_00004189;geneIDs=FBgn0031808.2.path1;transcripts=FBgn0031808.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74207581	74209806	.	+	.	ID=FBgn0031808.2.mrna1;geneID=FBgn0031808.2.path1;Name=FBgn0031808.2;Dir=indeterminatecoverage=100.0;identity=99.4;matches=2213;mismatches=13;indels=0;unknowns=0;Target=FBgn0031808.2 2226 1 .;locus=RLOC_00004189
ChrX	stalkie_big_nohaplotig	exon	74207581	74209806	99	+	.	Parent=FBgn0031808.2.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74207581	74209806	.	+	0	Parent=FBgn0031808.2.mrna1
ChrX	gffcl	locus	74230167	74231031	.	+	.	ID=RLOC_00004191;geneIDs=comp154188_c0_seq1.path1;transcripts=comp154188_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74230167	74231031	.	+	.	ID=comp154188_c0_seq1.mrna1;geneID=comp154188_c0_seq1.path1;Name=comp154188_c0_seq1;Dir=sensecoverage=99.9;identity=98.4;matches=783;mismatches=13;indels=0;unknowns=0;Target=comp154188_c0_seq1 122 358 +;locus=RLOC_00004191
ChrX	stalkie_big_nohaplotig	exon	74230167	74230619	98	+	.	Parent=comp154188_c0_seq1.mrna1;Target=comp154188_c0_seq1 2 454 +
ChrX	stalkie_big_nohaplotig	exon	74230689	74231031	97	+	.	Parent=comp154188_c0_seq1.mrna1;Target=comp154188_c0_seq1 455 797 +
ChrX	stalkie_big_nohaplotig	CDS	74230287	74230523	.	+	0	Parent=comp154188_c0_seq1.mrna1
ChrX	gffcl	locus	74376562	74377202	.	-	.	ID=RLOC_00004192;geneIDs=comp151768_c0_seq1.path1;transcripts=comp151768_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74376562	74377202	.	-	.	ID=comp151768_c0_seq1.mrna1;geneID=comp151768_c0_seq1.path1;Name=comp151768_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=636;mismatches=4;indels=1;unknowns=0;Target=comp151768_c0_seq1 640 1 .;CDS_Target=comp151768_c0_seq1 44 3 .;locus=RLOC_00004192
ChrX	stalkie_big_nohaplotig	exon	74376562	74377202	99	-	.	Parent=comp151768_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74377158	74377200	.	-	0	Parent=comp151768_c0_seq1.mrna1
ChrX	gffcl	locus	74410277	74413536	.	+	.	ID=RLOC_00004193;geneIDs=comp161479_c0_seq1.path1;transcripts=comp161479_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74410277	74413536	.	+	.	ID=comp161479_c0_seq1.mrna1;geneID=comp161479_c0_seq1.path1;Name=comp161479_c0_seq1;Dir=indeterminatecoverage=83.2;identity=99.1;matches=3155;mismatches=24;indels=6;unknowns=0;Target=comp161479_c0_seq1 1405 1232 .;locus=RLOC_00004193
ChrX	stalkie_big_nohaplotig	exon	74410277	74412040	99	+	.	Parent=comp161479_c0_seq1.mrna1;Target=comp161479_c0_seq1 1766 1 .
ChrX	stalkie_big_nohaplotig	exon	74412122	74413536	98	+	.	Parent=comp161479_c0_seq1.mrna1;Target=comp161479_c0_seq1 3185 1767 .
ChrX	stalkie_big_nohaplotig	CDS	74411506	74411679	.	+	0	Parent=comp161479_c0_seq1.mrna1
ChrX	gffcl	locus	74423556	74434516	.	-	.	ID=RLOC_00004194;geneIDs=FBgn0002973.1.path1;transcripts=FBgn0002973.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74423556	74434516	.	-	.	ID=FBgn0002973.1.mrna1;geneID=FBgn0002973.1.path1;Name=FBgn0002973.1;Dir=sensecoverage=100.0;identity=99.4;matches=1753;mismatches=11;indels=0;unknowns=0;locus=RLOC_00004194
ChrX	stalkie_big_nohaplotig	exon	74423556	74424983	99	-	.	Parent=FBgn0002973.1.mrna1;Target=FBgn0002973.1 337 1764 +
ChrX	stalkie_big_nohaplotig	exon	74425885	74426133	98	-	.	Parent=FBgn0002973.1.mrna1;Target=FBgn0002973.1 88 336 +
ChrX	stalkie_big_nohaplotig	exon	74434430	74434516	100	-	.	Parent=FBgn0002973.1.mrna1;Target=FBgn0002973.1 1 87 +
ChrX	stalkie_big_nohaplotig	CDS	74423556	74424983	.	-	0	Parent=FBgn0002973.1.mrna1;Target=FBgn0002973.1 337 1764 +
ChrX	stalkie_big_nohaplotig	CDS	74425885	74426133	.	-	0	Parent=FBgn0002973.1.mrna1;Target=FBgn0002973.1 88 336 +
ChrX	stalkie_big_nohaplotig	CDS	74434430	74434516	.	-	0	Parent=FBgn0002973.1.mrna1;Target=FBgn0002973.1 1 87 +
ChrX	gffcl	locus	74498453	74503222	.	-	.	ID=RLOC_00004195;geneIDs=FBgn0011232.1.path1;transcripts=FBgn0011232.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74498453	74503222	.	-	.	ID=FBgn0011232.1.mrna1;geneID=FBgn0011232.1.path1;Name=FBgn0011232.1;Dir=sensecoverage=100.0;identity=100.0;matches=2817;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004195
ChrX	stalkie_big_nohaplotig	exon	74498453	74499439	100	-	.	Parent=FBgn0011232.1.mrna1;Target=FBgn0011232.1 1831 2817 +
ChrX	stalkie_big_nohaplotig	exon	74499500	74500278	100	-	.	Parent=FBgn0011232.1.mrna1;Target=FBgn0011232.1 1052 1830 +
ChrX	stalkie_big_nohaplotig	exon	74502113	74503059	100	-	.	Parent=FBgn0011232.1.mrna1;Target=FBgn0011232.1 105 1051 +
ChrX	stalkie_big_nohaplotig	exon	74503119	74503222	100	-	.	Parent=FBgn0011232.1.mrna1;Target=FBgn0011232.1 1 104 +
ChrX	stalkie_big_nohaplotig	CDS	74498453	74499439	.	-	0	Parent=FBgn0011232.1.mrna1;Target=FBgn0011232.1 1831 2817 +
ChrX	stalkie_big_nohaplotig	CDS	74499500	74500278	.	-	2	Parent=FBgn0011232.1.mrna1;Target=FBgn0011232.1 1052 1830 +
ChrX	stalkie_big_nohaplotig	CDS	74502113	74503059	.	-	1	Parent=FBgn0011232.1.mrna1;Target=FBgn0011232.1 105 1051 +
ChrX	stalkie_big_nohaplotig	CDS	74503119	74503222	.	-	0	Parent=FBgn0011232.1.mrna1;Target=FBgn0011232.1 1 104 +
ChrX	gffcl	locus	74505849	74508951	.	+	.	ID=RLOC_00004196;geneIDs=FBgn0032117.1.path1;transcripts=FBgn0032117.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74505849	74508951	.	+	.	ID=FBgn0032117.1.mrna1;geneID=FBgn0032117.1.path1;Name=FBgn0032117.1;Dir=sensecoverage=100.0;identity=100.0;matches=1296;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004196
ChrX	stalkie_big_nohaplotig	exon	74505849	74505947	100	+	.	Parent=FBgn0032117.1.mrna1;Target=FBgn0032117.1 1 99 +
ChrX	stalkie_big_nohaplotig	exon	74506007	74506144	100	+	.	Parent=FBgn0032117.1.mrna1;Target=FBgn0032117.1 100 237 +
ChrX	stalkie_big_nohaplotig	exon	74507774	74508174	100	+	.	Parent=FBgn0032117.1.mrna1;Target=FBgn0032117.1 238 638 +
ChrX	stalkie_big_nohaplotig	exon	74508233	74508410	100	+	.	Parent=FBgn0032117.1.mrna1;Target=FBgn0032117.1 639 816 +
ChrX	stalkie_big_nohaplotig	exon	74508472	74508951	100	+	.	Parent=FBgn0032117.1.mrna1;Target=FBgn0032117.1 817 1296 +
ChrX	stalkie_big_nohaplotig	CDS	74505849	74505947	.	+	0	Parent=FBgn0032117.1.mrna1;Target=FBgn0032117.1 1 99 +
ChrX	stalkie_big_nohaplotig	CDS	74506007	74506144	.	+	0	Parent=FBgn0032117.1.mrna1;Target=FBgn0032117.1 100 237 +
ChrX	stalkie_big_nohaplotig	CDS	74507774	74508174	.	+	0	Parent=FBgn0032117.1.mrna1;Target=FBgn0032117.1 238 638 +
ChrX	stalkie_big_nohaplotig	CDS	74508233	74508410	.	+	1	Parent=FBgn0032117.1.mrna1;Target=FBgn0032117.1 639 816 +
ChrX	stalkie_big_nohaplotig	CDS	74508472	74508951	.	+	0	Parent=FBgn0032117.1.mrna1;Target=FBgn0032117.1 817 1296 +
ChrX	gffcl	locus	74561017	74698012	.	-	.	ID=RLOC_00004198;geneIDs=comp153864_c0_seq1.path1;transcripts=comp153864_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74561017	74698012	.	-	.	ID=comp153864_c0_seq1.mrna1;geneID=comp153864_c0_seq1.path1;Name=comp153864_c0_seq1;Dir=indeterminatecoverage=94.5;identity=93.8;matches=1261;mismatches=32;indels=51;unknowns=0;Target=comp153864_c0_seq1 717 640 .;locus=RLOC_00004198
ChrX	stalkie_big_nohaplotig	exon	74561017	74561018	100	-	.	Parent=comp153864_c0_seq1.mrna1;Target=comp153864_c0_seq1 1414 1413 .
ChrX	stalkie_big_nohaplotig	exon	74569451	74569475	35	-	.	Parent=comp153864_c0_seq1.mrna1;Target=comp153864_c0_seq1 1412 1351 .
ChrX	stalkie_big_nohaplotig	exon	74580901	74580908	100	-	.	Parent=comp153864_c0_seq1.mrna1;Target=comp153864_c0_seq1 1350 1343 .
ChrX	stalkie_big_nohaplotig	exon	74591389	74591399	100	-	.	Parent=comp153864_c0_seq1.mrna1;Target=comp153864_c0_seq1 1342 1332 .
ChrX	stalkie_big_nohaplotig	exon	74617102	74617113	100	-	.	Parent=comp153864_c0_seq1.mrna1;Target=comp153864_c0_seq1 1307 1296 .
ChrX	stalkie_big_nohaplotig	exon	74617165	74617169	100	-	.	Parent=comp153864_c0_seq1.mrna1;Target=comp153864_c0_seq1 1295 1291 .
ChrX	stalkie_big_nohaplotig	exon	74623744	74623745	100	-	.	Parent=comp153864_c0_seq1.mrna1;Target=comp153864_c0_seq1 1290 1289 .
ChrX	stalkie_big_nohaplotig	exon	74631387	74631395	100	-	.	Parent=comp153864_c0_seq1.mrna1;Target=comp153864_c0_seq1 1288 1280 .
ChrX	stalkie_big_nohaplotig	exon	74632386	74632409	37	-	.	Parent=comp153864_c0_seq1.mrna1;Target=comp153864_c0_seq1 1279 1243 .
ChrX	stalkie_big_nohaplotig	exon	74632650	74632658	100	-	.	Parent=comp153864_c0_seq1.mrna1;Target=comp153864_c0_seq1 1240 1232 .
ChrX	stalkie_big_nohaplotig	exon	74639768	74639769	100	-	.	Parent=comp153864_c0_seq1.mrna1;Target=comp153864_c0_seq1 1187 1186 .
ChrX	stalkie_big_nohaplotig	exon	74645575	74645582	100	-	.	Parent=comp153864_c0_seq1.mrna1;Target=comp153864_c0_seq1 1185 1178 .
ChrX	stalkie_big_nohaplotig	exon	74649848	74649865	94	-	.	Parent=comp153864_c0_seq1.mrna1;Target=comp153864_c0_seq1 1177 1160 .
ChrX	stalkie_big_nohaplotig	exon	74696856	74698012	98	-	.	Parent=comp153864_c0_seq1.mrna1;Target=comp153864_c0_seq1 1159 4 .
ChrX	stalkie_big_nohaplotig	CDS	74697299	74697376	.	-	0	Parent=comp153864_c0_seq1.mrna1
ChrX	gffcl	locus	74577593	74578794	.	-	.	ID=RLOC_00004199;geneIDs=comp150026_c0_seq1.path1;transcripts=comp150026_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74577593	74578794	.	-	.	ID=comp150026_c0_seq1.mrna1;geneID=comp150026_c0_seq1.path1;Name=comp150026_c0_seq1;Dir=sensecoverage=98.2;identity=99.7;matches=899;mismatches=2;indels=1;unknowns=0;Target=comp150026_c0_seq1 3 44 +;locus=RLOC_00004199
ChrX	stalkie_big_nohaplotig	exon	74577593	74577822	100	-	.	Parent=comp150026_c0_seq1.mrna1;Target=comp150026_c0_seq1 673 902 +
ChrX	stalkie_big_nohaplotig	exon	74578011	74578352	100	-	.	Parent=comp150026_c0_seq1.mrna1;Target=comp150026_c0_seq1 331 672 +
ChrX	stalkie_big_nohaplotig	exon	74578411	74578559	100	-	.	Parent=comp150026_c0_seq1.mrna1;Target=comp150026_c0_seq1 182 330 +
ChrX	stalkie_big_nohaplotig	exon	74578615	74578794	98	-	.	Parent=comp150026_c0_seq1.mrna1;Target=comp150026_c0_seq1 1 181 +
ChrX	stalkie_big_nohaplotig	CDS	74578752	74578792	.	-	0	Parent=comp150026_c0_seq1.mrna1
ChrX	gffcl	locus	74611969	74613164	.	-	.	ID=RLOC_00004200;geneIDs=comp149799_c0_seq1.path1;transcripts=comp149799_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74611969	74613164	.	-	.	ID=comp149799_c0_seq1.mrna1;geneID=comp149799_c0_seq1.path1;Name=comp149799_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1196;mismatches=0;indels=0;unknowns=0;Target=comp149799_c0_seq1 1196 1 .;CDS_Target=comp149799_c0_seq1 1004 828 .;locus=RLOC_00004200
ChrX	stalkie_big_nohaplotig	exon	74611969	74613164	100	-	.	Parent=comp149799_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74612161	74612337	.	-	0	Parent=comp149799_c0_seq1.mrna1
ChrX	gffcl	locus	74613448	74613900	.	-	.	ID=RLOC_00004201;geneIDs=comp117463_c0_seq1.path1;transcripts=comp117463_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74613448	74613900	.	-	.	ID=comp117463_c0_seq1.mrna1;geneID=comp117463_c0_seq1.path1;Name=comp117463_c0_seq1;Dir=indeterminatecoverage=89.7;identity=100.0;matches=453;mismatches=0;indels=0;unknowns=0;Target=comp117463_c0_seq1 458 6 .;CDS_Target=comp117463_c0_seq1 215 99 .;locus=RLOC_00004201
ChrX	stalkie_big_nohaplotig	exon	74613448	74613900	100	-	.	Parent=comp117463_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74613691	74613807	.	-	0	Parent=comp117463_c0_seq1.mrna1
ChrX	gffcl	locus	74630608	74639174	.	-	.	ID=RLOC_00004202;geneIDs=FBgn0027052.1.path1;transcripts=FBgn0027052.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74630608	74639174	.	-	.	ID=FBgn0027052.1.mrna1;geneID=FBgn0027052.1.path1;Name=FBgn0027052.1;Dir=sensecoverage=100.0;identity=100.0;matches=921;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004202
ChrX	stalkie_big_nohaplotig	exon	74630608	74630847	100	-	.	Parent=FBgn0027052.1.mrna1;Target=FBgn0027052.1 682 921 +
ChrX	stalkie_big_nohaplotig	exon	74632147	74632203	100	-	.	Parent=FBgn0027052.1.mrna1;Target=FBgn0027052.1 625 681 +
ChrX	stalkie_big_nohaplotig	exon	74632269	74632374	100	-	.	Parent=FBgn0027052.1.mrna1;Target=FBgn0027052.1 519 624 +
ChrX	stalkie_big_nohaplotig	exon	74638482	74638623	100	-	.	Parent=FBgn0027052.1.mrna1;Target=FBgn0027052.1 377 518 +
ChrX	stalkie_big_nohaplotig	exon	74638687	74638885	100	-	.	Parent=FBgn0027052.1.mrna1;Target=FBgn0027052.1 178 376 +
ChrX	stalkie_big_nohaplotig	exon	74638936	74639068	100	-	.	Parent=FBgn0027052.1.mrna1;Target=FBgn0027052.1 45 177 +
ChrX	stalkie_big_nohaplotig	exon	74639131	74639174	100	-	.	Parent=FBgn0027052.1.mrna1;Target=FBgn0027052.1 1 44 +
ChrX	stalkie_big_nohaplotig	CDS	74630608	74630847	.	-	0	Parent=FBgn0027052.1.mrna1;Target=FBgn0027052.1 682 921 +
ChrX	stalkie_big_nohaplotig	CDS	74632147	74632203	.	-	0	Parent=FBgn0027052.1.mrna1;Target=FBgn0027052.1 625 681 +
ChrX	stalkie_big_nohaplotig	CDS	74632269	74632374	.	-	1	Parent=FBgn0027052.1.mrna1;Target=FBgn0027052.1 519 624 +
ChrX	stalkie_big_nohaplotig	CDS	74638482	74638623	.	-	2	Parent=FBgn0027052.1.mrna1;Target=FBgn0027052.1 377 518 +
ChrX	stalkie_big_nohaplotig	CDS	74638687	74638885	.	-	0	Parent=FBgn0027052.1.mrna1;Target=FBgn0027052.1 178 376 +
ChrX	stalkie_big_nohaplotig	CDS	74638936	74639068	.	-	1	Parent=FBgn0027052.1.mrna1;Target=FBgn0027052.1 45 177 +
ChrX	stalkie_big_nohaplotig	CDS	74639131	74639174	.	-	0	Parent=FBgn0027052.1.mrna1;Target=FBgn0027052.1 1 44 +
ChrX	gffcl	locus	74641427	74643636	.	+	.	ID=RLOC_00004203;geneIDs=FBgn0032138.1.path1;transcripts=FBgn0032138.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74641427	74643636	.	+	.	ID=FBgn0032138.1.mrna1;geneID=FBgn0032138.1.path1;Name=FBgn0032138.1;Dir=sensecoverage=100.0;identity=100.0;matches=1887;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004203
ChrX	stalkie_big_nohaplotig	exon	74641427	74641459	100	+	.	Parent=FBgn0032138.1.mrna1;Target=FBgn0032138.1 1 33 +
ChrX	stalkie_big_nohaplotig	exon	74641598	74641831	100	+	.	Parent=FBgn0032138.1.mrna1;Target=FBgn0032138.1 34 267 +
ChrX	stalkie_big_nohaplotig	exon	74641902	74643000	100	+	.	Parent=FBgn0032138.1.mrna1;Target=FBgn0032138.1 268 1366 +
ChrX	stalkie_big_nohaplotig	exon	74643060	74643307	100	+	.	Parent=FBgn0032138.1.mrna1;Target=FBgn0032138.1 1367 1614 +
ChrX	stalkie_big_nohaplotig	exon	74643364	74643636	100	+	.	Parent=FBgn0032138.1.mrna1;Target=FBgn0032138.1 1615 1887 +
ChrX	stalkie_big_nohaplotig	CDS	74641427	74641459	.	+	0	Parent=FBgn0032138.1.mrna1;Target=FBgn0032138.1 1 33 +
ChrX	stalkie_big_nohaplotig	CDS	74641598	74641831	.	+	0	Parent=FBgn0032138.1.mrna1;Target=FBgn0032138.1 34 267 +
ChrX	stalkie_big_nohaplotig	CDS	74641902	74643000	.	+	0	Parent=FBgn0032138.1.mrna1;Target=FBgn0032138.1 268 1366 +
ChrX	stalkie_big_nohaplotig	CDS	74643060	74643307	.	+	2	Parent=FBgn0032138.1.mrna1;Target=FBgn0032138.1 1367 1614 +
ChrX	stalkie_big_nohaplotig	CDS	74643364	74643636	.	+	0	Parent=FBgn0032138.1.mrna1;Target=FBgn0032138.1 1615 1887 +
ChrX	gffcl	locus	74650724	74658401	.	+	.	ID=RLOC_00004204;geneIDs=comp149655_c1_seq1.path1;transcripts=comp149655_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74650724	74658401	.	+	.	ID=comp149655_c1_seq1.mrna1;geneID=comp149655_c1_seq1.path1;Name=comp149655_c1_seq1;Dir=antisensecoverage=99.3;identity=99.8;matches=867;mismatches=1;indels=1;unknowns=0;locus=RLOC_00004204
ChrX	stalkie_big_nohaplotig	exon	74650724	74651096	99	+	.	Parent=comp149655_c1_seq1.mrna1;Target=comp149655_c1_seq1 502 875 -
ChrX	stalkie_big_nohaplotig	exon	74656660	74656972	100	+	.	Parent=comp149655_c1_seq1.mrna1;Target=comp149655_c1_seq1 189 501 -
ChrX	stalkie_big_nohaplotig	exon	74658220	74658401	99	+	.	Parent=comp149655_c1_seq1.mrna1;Target=comp149655_c1_seq1 7 188 -
ChrX	stalkie_big_nohaplotig	CDS	74656680	74656972	.	+	0	Parent=comp149655_c1_seq1.mrna1;Target=comp149655_c1_seq1 189 481 .
ChrX	stalkie_big_nohaplotig	CDS	74658220	74658301	.	+	1	Parent=comp149655_c1_seq1.mrna1;Target=comp149655_c1_seq1 107 188 .
ChrX	gffcl	locus	74664391	74664842	.	-	.	ID=RLOC_00004205;geneIDs=FBgn0015393.1.path1;transcripts=FBgn0015393.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74664391	74664842	.	-	.	ID=FBgn0015393.1.mrna1;geneID=FBgn0015393.1.path1;Name=FBgn0015393.1;Dir=sensecoverage=100.0;identity=100.0;matches=393;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004205
ChrX	stalkie_big_nohaplotig	exon	74664391	74664768	100	-	.	Parent=FBgn0015393.1.mrna1;Target=FBgn0015393.1 16 393 +
ChrX	stalkie_big_nohaplotig	exon	74664828	74664842	100	-	.	Parent=FBgn0015393.1.mrna1;Target=FBgn0015393.1 1 15 +
ChrX	stalkie_big_nohaplotig	CDS	74664391	74664768	.	-	0	Parent=FBgn0015393.1.mrna1;Target=FBgn0015393.1 16 393 +
ChrX	stalkie_big_nohaplotig	CDS	74664828	74664842	.	-	0	Parent=FBgn0015393.1.mrna1;Target=FBgn0015393.1 1 15 +
ChrX	gffcl	locus	74669301	74670228	.	-	.	ID=RLOC_00004207;geneIDs=comp146759_c2_seq1.path1;transcripts=comp146759_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74669301	74670228	.	-	.	ID=comp146759_c2_seq1.mrna1;geneID=comp146759_c2_seq1.path1;Name=comp146759_c2_seq1;Dir=indeterminatecoverage=98.0;identity=100.0;matches=928;mismatches=0;indels=0;unknowns=0;Target=comp146759_c2_seq1 947 20 .;CDS_Target=comp146759_c2_seq1 486 319 .;locus=RLOC_00004207
ChrX	stalkie_big_nohaplotig	exon	74669301	74670228	100	-	.	Parent=comp146759_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74669762	74669929	.	-	0	Parent=comp146759_c2_seq1.mrna1
ChrX	gffcl	locus	74694540	74694948	.	-	.	ID=RLOC_00004208;geneIDs=comp113940_c1_seq1.path1;transcripts=comp113940_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74694540	74694948	.	-	.	ID=comp113940_c1_seq1.mrna1;geneID=comp113940_c1_seq1.path1;Name=comp113940_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=409;mismatches=0;indels=0;unknowns=0;Target=comp113940_c1_seq1 409 1 .;CDS_Target=comp113940_c1_seq1 252 208 .;locus=RLOC_00004208
ChrX	stalkie_big_nohaplotig	exon	74694540	74694948	100	-	.	Parent=comp113940_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74694697	74694741	.	-	0	Parent=comp113940_c1_seq1.mrna1
ChrX	gffcl	locus	74701564	74702464	.	+	.	ID=RLOC_00004209;geneIDs=comp143368_c0_seq1.path1;transcripts=comp143368_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74701564	74702464	.	+	.	ID=comp143368_c0_seq1.mrna1;geneID=comp143368_c0_seq1.path1;Name=comp143368_c0_seq1;Dir=indeterminatecoverage=97.6;identity=100.0;matches=901;mismatches=0;indels=0;unknowns=0;Target=comp143368_c0_seq1 923 23 .;CDS_Target=comp143368_c0_seq1 528 352 .;locus=RLOC_00004209
ChrX	stalkie_big_nohaplotig	exon	74701564	74702464	100	+	.	Parent=comp143368_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74701893	74702069	.	+	0	Parent=comp143368_c0_seq1.mrna1
ChrX	gffcl	locus	74718226	74720301	.	-	.	ID=RLOC_00004210;geneIDs=comp155124_c0_seq1.path1;transcripts=comp155124_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74718226	74720301	.	-	.	ID=comp155124_c0_seq1.mrna1;geneID=comp155124_c0_seq1.path1;Name=comp155124_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2076;mismatches=0;indels=0;unknowns=0;Target=comp155124_c0_seq1 2076 1 .;CDS_Target=comp155124_c0_seq1 1767 1645 .;locus=RLOC_00004210
ChrX	stalkie_big_nohaplotig	exon	74718226	74720301	100	-	.	Parent=comp155124_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74718535	74718657	.	-	0	Parent=comp155124_c0_seq1.mrna1
ChrX	gffcl	locus	74729619	74828834	.	.	.	ID=RLOC_00004211;geneIDs=comp148909_c0_seq1.path1,comp163682_c0_seq1.path1;transcripts=comp163682_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74729619	74827946	.	+	.	ID=comp163682_c0_seq1.mrna1;geneID=comp163682_c0_seq1.path1;Name=comp163682_c0_seq1;Dir=indeterminatecoverage=88.0;identity=99.8;matches=2904;mismatches=3;indels=2;unknowns=0;Target=comp163682_c0_seq1 2766 2338 .;locus=RLOC_00004211
ChrX	stalkie_big_nohaplotig	exon	74729619	74732494	99	+	.	Parent=comp163682_c0_seq1.mrna1;Target=comp163682_c0_seq1 2878 1 .
ChrX	stalkie_big_nohaplotig	exon	74738672	74738674	100	+	.	Parent=comp163682_c0_seq1.mrna1;Target=comp163682_c0_seq1 2881 2879 .
ChrX	stalkie_big_nohaplotig	exon	74742193	74742194	100	+	.	Parent=comp163682_c0_seq1.mrna1;Target=comp163682_c0_seq1 2883 2882 .
ChrX	stalkie_big_nohaplotig	exon	74746482	74746484	100	+	.	Parent=comp163682_c0_seq1.mrna1;Target=comp163682_c0_seq1 2886 2884 .
ChrX	stalkie_big_nohaplotig	exon	74749420	74749426	100	+	.	Parent=comp163682_c0_seq1.mrna1;Target=comp163682_c0_seq1 2893 2887 .
ChrX	stalkie_big_nohaplotig	exon	74765089	74765091	100	+	.	Parent=comp163682_c0_seq1.mrna1;Target=comp163682_c0_seq1 2896 2894 .
ChrX	stalkie_big_nohaplotig	exon	74794220	74794221	100	+	.	Parent=comp163682_c0_seq1.mrna1;Target=comp163682_c0_seq1 2898 2897 .
ChrX	stalkie_big_nohaplotig	exon	74806691	74806694	100	+	.	Parent=comp163682_c0_seq1.mrna1;Target=comp163682_c0_seq1 2902 2899 .
ChrX	stalkie_big_nohaplotig	exon	74822214	74822217	100	+	.	Parent=comp163682_c0_seq1.mrna1;Target=comp163682_c0_seq1 2906 2903 .
ChrX	stalkie_big_nohaplotig	exon	74827944	74827946	100	+	.	Parent=comp163682_c0_seq1.mrna1;Target=comp163682_c0_seq1 2909 2907 .
ChrX	stalkie_big_nohaplotig	CDS	74731954	74732382	.	+	0	Parent=comp163682_c0_seq1.mrna1
ChrX	gffcl	locus	74767305	74792825	.	-	.	ID=RLOC_00004212;geneIDs=FBgn0032136.1.path1;transcripts=FBgn0032136.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74767305	74792825	.	-	.	ID=FBgn0032136.1.mrna1;geneID=FBgn0032136.1.path1;Name=FBgn0032136.1;Dir=sensecoverage=100.0;identity=100.0;matches=13059;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004212
ChrX	stalkie_big_nohaplotig	exon	74767305	74767349	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 13015 13059 +
ChrX	stalkie_big_nohaplotig	exon	74767427	74768111	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 12330 13014 +
ChrX	stalkie_big_nohaplotig	exon	74768169	74768369	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 12129 12329 +
ChrX	stalkie_big_nohaplotig	exon	74768452	74769011	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 11569 12128 +
ChrX	stalkie_big_nohaplotig	exon	74769078	74769164	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 11482 11568 +
ChrX	stalkie_big_nohaplotig	exon	74769695	74769846	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 11330 11481 +
ChrX	stalkie_big_nohaplotig	exon	74769907	74771587	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 9649 11329 +
ChrX	stalkie_big_nohaplotig	exon	74771665	74772252	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 9061 9648 +
ChrX	stalkie_big_nohaplotig	exon	74772328	74772946	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 8442 9060 +
ChrX	stalkie_big_nohaplotig	exon	74773235	74773384	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 8292 8441 +
ChrX	stalkie_big_nohaplotig	exon	74773457	74774847	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 6901 8291 +
ChrX	stalkie_big_nohaplotig	exon	74774921	74775079	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 6742 6900 +
ChrX	stalkie_big_nohaplotig	exon	74775222	74777199	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 4764 6741 +
ChrX	stalkie_big_nohaplotig	exon	74778690	74779048	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 4405 4763 +
ChrX	stalkie_big_nohaplotig	exon	74779136	74779346	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 4194 4404 +
ChrX	stalkie_big_nohaplotig	exon	74779414	74779757	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 3850 4193 +
ChrX	stalkie_big_nohaplotig	exon	74781028	74782523	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 2354 3849 +
ChrX	stalkie_big_nohaplotig	exon	74782597	74782842	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 2108 2353 +
ChrX	stalkie_big_nohaplotig	exon	74782899	74783731	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 1275 2107 +
ChrX	stalkie_big_nohaplotig	exon	74784064	74784307	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 1031 1274 +
ChrX	stalkie_big_nohaplotig	exon	74784368	74784527	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 871 1030 +
ChrX	stalkie_big_nohaplotig	exon	74784584	74785314	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 140 870 +
ChrX	stalkie_big_nohaplotig	exon	74792687	74792825	100	-	.	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 1 139 +
ChrX	stalkie_big_nohaplotig	CDS	74767305	74767349	.	-	0	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 13015 13059 +
ChrX	stalkie_big_nohaplotig	CDS	74767427	74768111	.	-	1	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 12330 13014 +
ChrX	stalkie_big_nohaplotig	CDS	74768169	74768369	.	-	1	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 12129 12329 +
ChrX	stalkie_big_nohaplotig	CDS	74768452	74769011	.	-	0	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 11569 12128 +
ChrX	stalkie_big_nohaplotig	CDS	74769078	74769164	.	-	0	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 11482 11568 +
ChrX	stalkie_big_nohaplotig	CDS	74769695	74769846	.	-	2	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 11330 11481 +
ChrX	stalkie_big_nohaplotig	CDS	74769907	74771587	.	-	0	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 9649 11329 +
ChrX	stalkie_big_nohaplotig	CDS	74771665	74772252	.	-	0	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 9061 9648 +
ChrX	stalkie_big_nohaplotig	CDS	74772328	74772946	.	-	1	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 8442 9060 +
ChrX	stalkie_big_nohaplotig	CDS	74773235	74773384	.	-	1	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 8292 8441 +
ChrX	stalkie_big_nohaplotig	CDS	74773457	74774847	.	-	0	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 6901 8291 +
ChrX	stalkie_big_nohaplotig	CDS	74774921	74775079	.	-	0	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 6742 6900 +
ChrX	stalkie_big_nohaplotig	CDS	74775222	74777199	.	-	1	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 4764 6741 +
ChrX	stalkie_big_nohaplotig	CDS	74778690	74779048	.	-	0	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 4405 4763 +
ChrX	stalkie_big_nohaplotig	CDS	74779136	74779346	.	-	1	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 4194 4404 +
ChrX	stalkie_big_nohaplotig	CDS	74779414	74779757	.	-	0	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 3850 4193 +
ChrX	stalkie_big_nohaplotig	CDS	74781028	74782523	.	-	2	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 2354 3849 +
ChrX	stalkie_big_nohaplotig	CDS	74782597	74782842	.	-	2	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 2108 2353 +
ChrX	stalkie_big_nohaplotig	CDS	74782899	74783731	.	-	1	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 1275 2107 +
ChrX	stalkie_big_nohaplotig	CDS	74784064	74784307	.	-	2	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 1031 1274 +
ChrX	stalkie_big_nohaplotig	CDS	74784368	74784527	.	-	0	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 871 1030 +
ChrX	stalkie_big_nohaplotig	CDS	74784584	74785314	.	-	2	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 140 870 +
ChrX	stalkie_big_nohaplotig	CDS	74792687	74792825	.	-	0	Parent=FBgn0032136.1.mrna1;Target=FBgn0032136.1 1 139 +
ChrX	gffcl	locus	74829108	74830274	.	+	.	ID=RLOC_00004213;geneIDs=comp154384_c0_seq1.path1;transcripts=comp154384_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74829108	74830274	.	+	.	ID=comp154384_c0_seq1.mrna1;geneID=comp154384_c0_seq1.path1;Name=comp154384_c0_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=1167;mismatches=0;indels=0;unknowns=0;Target=comp154384_c0_seq1 1167 1 .;CDS_Target=comp154384_c0_seq1 433 326 .;locus=RLOC_00004213
ChrX	stalkie_big_nohaplotig	exon	74829108	74830274	100	+	.	Parent=comp154384_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74829433	74829540	.	+	0	Parent=comp154384_c0_seq1.mrna1
ChrX	gffcl	locus	74830709	74831148	.	+	.	ID=RLOC_00004214;geneIDs=comp134816_c0_seq1.path1;transcripts=comp134816_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74830709	74831148	.	+	.	ID=comp134816_c0_seq1.mrna1;geneID=comp134816_c0_seq1.path1;Name=comp134816_c0_seq1;Dir=indeterminatecoverage=99.8;identity=95.5;matches=421;mismatches=19;indels=1;unknowns=0;Target=comp134816_c0_seq1 441 1 .;CDS_Target=comp134816_c0_seq1 440 255 .;locus=RLOC_00004214
ChrX	stalkie_big_nohaplotig	exon	74830709	74831148	95	+	.	Parent=comp134816_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74830963	74831147	.	+	0	Parent=comp134816_c0_seq1.mrna1
ChrX	gffcl	locus	74878607	74904255	.	+	.	ID=RLOC_00004216;geneIDs=FBgn0003209.1.path1;transcripts=FBgn0003209.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74878607	74904255	.	+	.	ID=FBgn0003209.1.mrna1;geneID=FBgn0003209.1.path1;Name=FBgn0003209.1;Dir=sensecoverage=100.0;identity=100.0;matches=2901;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004216
ChrX	stalkie_big_nohaplotig	exon	74878607	74879109	100	+	.	Parent=FBgn0003209.1.mrna1;Target=FBgn0003209.1 1 503 +
ChrX	stalkie_big_nohaplotig	exon	74898245	74898351	100	+	.	Parent=FBgn0003209.1.mrna1;Target=FBgn0003209.1 504 610 +
ChrX	stalkie_big_nohaplotig	exon	74898426	74898537	100	+	.	Parent=FBgn0003209.1.mrna1;Target=FBgn0003209.1 611 722 +
ChrX	stalkie_big_nohaplotig	exon	74900244	74900556	100	+	.	Parent=FBgn0003209.1.mrna1;Target=FBgn0003209.1 723 1035 +
ChrX	stalkie_big_nohaplotig	exon	74900627	74900841	100	+	.	Parent=FBgn0003209.1.mrna1;Target=FBgn0003209.1 1036 1250 +
ChrX	stalkie_big_nohaplotig	exon	74900913	74901071	100	+	.	Parent=FBgn0003209.1.mrna1;Target=FBgn0003209.1 1251 1409 +
ChrX	stalkie_big_nohaplotig	exon	74901131	74901570	100	+	.	Parent=FBgn0003209.1.mrna1;Target=FBgn0003209.1 1410 1849 +
ChrX	stalkie_big_nohaplotig	exon	74901646	74902538	100	+	.	Parent=FBgn0003209.1.mrna1;Target=FBgn0003209.1 1850 2742 +
ChrX	stalkie_big_nohaplotig	exon	74904097	74904255	100	+	.	Parent=FBgn0003209.1.mrna1;Target=FBgn0003209.1 2743 2901 +
ChrX	stalkie_big_nohaplotig	CDS	74878607	74879109	.	+	0	Parent=FBgn0003209.1.mrna1;Target=FBgn0003209.1 1 503 +
ChrX	stalkie_big_nohaplotig	CDS	74898245	74898351	.	+	1	Parent=FBgn0003209.1.mrna1;Target=FBgn0003209.1 504 610 +
ChrX	stalkie_big_nohaplotig	CDS	74898426	74898537	.	+	2	Parent=FBgn0003209.1.mrna1;Target=FBgn0003209.1 611 722 +
ChrX	stalkie_big_nohaplotig	CDS	74900244	74900556	.	+	1	Parent=FBgn0003209.1.mrna1;Target=FBgn0003209.1 723 1035 +
ChrX	stalkie_big_nohaplotig	CDS	74900627	74900841	.	+	0	Parent=FBgn0003209.1.mrna1;Target=FBgn0003209.1 1036 1250 +
ChrX	stalkie_big_nohaplotig	CDS	74900913	74901071	.	+	1	Parent=FBgn0003209.1.mrna1;Target=FBgn0003209.1 1251 1409 +
ChrX	stalkie_big_nohaplotig	CDS	74901131	74901570	.	+	1	Parent=FBgn0003209.1.mrna1;Target=FBgn0003209.1 1410 1849 +
ChrX	stalkie_big_nohaplotig	CDS	74901646	74902538	.	+	2	Parent=FBgn0003209.1.mrna1;Target=FBgn0003209.1 1850 2742 +
ChrX	stalkie_big_nohaplotig	CDS	74904097	74904255	.	+	0	Parent=FBgn0003209.1.mrna1;Target=FBgn0003209.1 2743 2901 +
ChrX	gffcl	locus	74931037	74986019	.	+	.	ID=RLOC_00004217;geneIDs=FBgn0003651.1.path1,comp760216_c0_seq1.path1;transcripts=FBgn0003651.1.mrna1,comp760216_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74931037	74986019	.	+	.	ID=FBgn0003651.1.mrna1;geneID=FBgn0003651.1.path1;Name=FBgn0003651.1;Dir=sensecoverage=100.0;identity=100.0;matches=2136;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004217
ChrX	stalkie_big_nohaplotig	exon	74931037	74931127	100	+	.	Parent=FBgn0003651.1.mrna1;Target=FBgn0003651.1 1 91 +
ChrX	stalkie_big_nohaplotig	exon	74979601	74979979	100	+	.	Parent=FBgn0003651.1.mrna1;Target=FBgn0003651.1 92 470 +
ChrX	stalkie_big_nohaplotig	exon	74980334	74980830	100	+	.	Parent=FBgn0003651.1.mrna1;Target=FBgn0003651.1 471 967 +
ChrX	stalkie_big_nohaplotig	exon	74980897	74981034	100	+	.	Parent=FBgn0003651.1.mrna1;Target=FBgn0003651.1 968 1105 +
ChrX	stalkie_big_nohaplotig	exon	74983857	74984093	100	+	.	Parent=FBgn0003651.1.mrna1;Target=FBgn0003651.1 1106 1342 +
ChrX	stalkie_big_nohaplotig	exon	74985226	74986019	100	+	.	Parent=FBgn0003651.1.mrna1;Target=FBgn0003651.1 1343 2136 +
ChrX	stalkie_big_nohaplotig	CDS	74931037	74931127	.	+	0	Parent=FBgn0003651.1.mrna1;Target=FBgn0003651.1 1 91 +
ChrX	stalkie_big_nohaplotig	CDS	74979601	74979979	.	+	2	Parent=FBgn0003651.1.mrna1;Target=FBgn0003651.1 92 470 +
ChrX	stalkie_big_nohaplotig	CDS	74980334	74980830	.	+	1	Parent=FBgn0003651.1.mrna1;Target=FBgn0003651.1 471 967 +
ChrX	stalkie_big_nohaplotig	CDS	74980897	74981034	.	+	2	Parent=FBgn0003651.1.mrna1;Target=FBgn0003651.1 968 1105 +
ChrX	stalkie_big_nohaplotig	CDS	74983857	74984093	.	+	2	Parent=FBgn0003651.1.mrna1;Target=FBgn0003651.1 1106 1342 +
ChrX	stalkie_big_nohaplotig	CDS	74985226	74986019	.	+	2	Parent=FBgn0003651.1.mrna1;Target=FBgn0003651.1 1343 2136 +
ChrX	stalkie_big_nohaplotig	mRNA	74970810	74979623	.	+	.	ID=comp760216_c0_seq1.mrna1;geneID=comp760216_c0_seq1.path1;Name=comp760216_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=363;mismatches=2;indels=0;unknowns=0;Target=comp760216_c0_seq1 336 365 .;locus=RLOC_00004217
ChrX	stalkie_big_nohaplotig	exon	74970810	74971151	99	+	.	Parent=comp760216_c0_seq1.mrna1;Target=comp760216_c0_seq1 24 365 -
ChrX	stalkie_big_nohaplotig	exon	74979601	74979623	95	+	.	Parent=comp760216_c0_seq1.mrna1;Target=comp760216_c0_seq1 1 23 -
ChrX	stalkie_big_nohaplotig	CDS	74970810	74970839	.	+	0	Parent=comp760216_c0_seq1.mrna1
ChrX	gffcl	locus	74949126	74950087	.	-	.	ID=RLOC_00004218;geneIDs=comp100325_c1_seq1.path1;transcripts=comp100325_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74949126	74950087	.	-	.	ID=comp100325_c1_seq1.mrna1;geneID=comp100325_c1_seq1.path1;Name=comp100325_c1_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=962;mismatches=0;indels=0;unknowns=0;Target=comp100325_c1_seq1 963 2 .;CDS_Target=comp100325_c1_seq1 580 455 .;locus=RLOC_00004218
ChrX	stalkie_big_nohaplotig	exon	74949126	74950087	100	-	.	Parent=comp100325_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	74949509	74949634	.	-	0	Parent=comp100325_c1_seq1.mrna1
ChrX	gffcl	locus	74989729	74990033	.	-	.	ID=RLOC_00004219;geneIDs=FBgn0010314.2.path1;transcripts=FBgn0010314.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74989729	74990033	.	-	.	ID=FBgn0010314.2.mrna1;geneID=FBgn0010314.2.path1;Name=FBgn0010314.2;Dir=sensecoverage=100.0;identity=100.0;matches=237;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004219
ChrX	stalkie_big_nohaplotig	exon	74989729	74989894	100	-	.	Parent=FBgn0010314.2.mrna1;Target=FBgn0010314.2 72 237 +
ChrX	stalkie_big_nohaplotig	exon	74989963	74990033	100	-	.	Parent=FBgn0010314.2.mrna1;Target=FBgn0010314.2 1 71 +
ChrX	stalkie_big_nohaplotig	CDS	74989729	74989894	.	-	1	Parent=FBgn0010314.2.mrna1;Target=FBgn0010314.2 72 237 +
ChrX	stalkie_big_nohaplotig	CDS	74989963	74990033	.	-	0	Parent=FBgn0010314.2.mrna1;Target=FBgn0010314.2 1 71 +
ChrX	gffcl	locus	74998234	74998813	.	+	.	ID=RLOC_00004220;geneIDs=comp191426_c0_seq1.path1;transcripts=comp191426_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	74998234	74998813	.	+	.	ID=comp191426_c0_seq1.mrna1;geneID=comp191426_c0_seq1.path1;Name=comp191426_c0_seq1;Dir=sensecoverage=97.0;identity=100.0;matches=524;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004220
ChrX	stalkie_big_nohaplotig	exon	74998234	74998417	100	+	.	Parent=comp191426_c0_seq1.mrna1;Target=comp191426_c0_seq1 1 184 +
ChrX	stalkie_big_nohaplotig	exon	74998474	74998813	100	+	.	Parent=comp191426_c0_seq1.mrna1;Target=comp191426_c0_seq1 185 524 +
ChrX	stalkie_big_nohaplotig	CDS	74998339	74998417	.	+	0	Parent=comp191426_c0_seq1.mrna1;Target=comp191426_c0_seq1 106 184 +
ChrX	stalkie_big_nohaplotig	CDS	74998474	74998658	.	+	2	Parent=comp191426_c0_seq1.mrna1;Target=comp191426_c0_seq1 185 369 +
ChrX	gffcl	locus	75013080	75013996	.	-	.	ID=RLOC_00004222;geneIDs=FBgn0086446.1.path1;transcripts=FBgn0086446.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75013080	75013996	.	-	.	ID=FBgn0086446.1.mrna1;geneID=FBgn0086446.1.path1;Name=FBgn0086446.1;Dir=sensecoverage=100.0;identity=100.0;matches=621;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004222
ChrX	stalkie_big_nohaplotig	exon	75013080	75013178	100	-	.	Parent=FBgn0086446.1.mrna1;Target=FBgn0086446.1 523 621 +
ChrX	stalkie_big_nohaplotig	exon	75013418	75013868	100	-	.	Parent=FBgn0086446.1.mrna1;Target=FBgn0086446.1 72 522 +
ChrX	stalkie_big_nohaplotig	exon	75013926	75013996	100	-	.	Parent=FBgn0086446.1.mrna1;Target=FBgn0086446.1 1 71 +
ChrX	stalkie_big_nohaplotig	CDS	75013080	75013178	.	-	0	Parent=FBgn0086446.1.mrna1;Target=FBgn0086446.1 523 621 +
ChrX	stalkie_big_nohaplotig	CDS	75013418	75013868	.	-	1	Parent=FBgn0086446.1.mrna1;Target=FBgn0086446.1 72 522 +
ChrX	stalkie_big_nohaplotig	CDS	75013926	75013996	.	-	0	Parent=FBgn0086446.1.mrna1;Target=FBgn0086446.1 1 71 +
ChrX	gffcl	locus	75023643	75023888	.	+	.	ID=RLOC_00004223;geneIDs=comp960512_c0_seq1.path1;transcripts=comp960512_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75023643	75023888	.	+	.	ID=comp960512_c0_seq1.mrna1;geneID=comp960512_c0_seq1.path1;Name=comp960512_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=246;mismatches=0;indels=0;unknowns=0;Target=comp960512_c0_seq1 246 1 .;CDS_Target=comp960512_c0_seq1 188 69 .;locus=RLOC_00004223
ChrX	stalkie_big_nohaplotig	exon	75023643	75023888	100	+	.	Parent=comp960512_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	75023711	75023830	.	+	0	Parent=comp960512_c0_seq1.mrna1
ChrX	gffcl	locus	75069574	75071775	.	+	.	ID=RLOC_00004224;geneIDs=FBgn0010300.1.path1;transcripts=FBgn0010300.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75069574	75071775	.	+	.	ID=FBgn0010300.1.mrna1;geneID=FBgn0010300.1.path1;Name=FBgn0010300.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2202;mismatches=0;indels=0;unknowns=0;Target=FBgn0010300.1 2202 1 .;locus=RLOC_00004224
ChrX	stalkie_big_nohaplotig	exon	75069574	75071775	100	+	.	Parent=FBgn0010300.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	75069574	75071775	.	+	0	Parent=FBgn0010300.1.mrna1
ChrX	gffcl	locus	75073879	75074502	.	+	.	ID=RLOC_00004225;geneIDs=comp118753_c0_seq1.path1;transcripts=comp118753_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75073879	75074502	.	+	.	ID=comp118753_c0_seq1.mrna1;geneID=comp118753_c0_seq1.path1;Name=comp118753_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=624;mismatches=0;indels=0;unknowns=0;Target=comp118753_c0_seq1 624 1 .;CDS_Target=comp118753_c0_seq1 411 313 .;locus=RLOC_00004225
ChrX	stalkie_big_nohaplotig	exon	75073879	75074502	100	+	.	Parent=comp118753_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	75074191	75074289	.	+	0	Parent=comp118753_c0_seq1.mrna1
ChrX	gffcl	locus	75077545	75078365	.	+	.	ID=RLOC_00004226;geneIDs=comp118077_c0_seq1.path1;transcripts=comp118077_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75077545	75078365	.	+	.	ID=comp118077_c0_seq1.mrna1;geneID=comp118077_c0_seq1.path1;Name=comp118077_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=819;mismatches=2;indels=0;unknowns=0;Target=comp118077_c0_seq1 821 1 .;CDS_Target=comp118077_c0_seq1 821 729 .;locus=RLOC_00004226
ChrX	stalkie_big_nohaplotig	exon	75077545	75078365	99	+	.	Parent=comp118077_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	75078273	75078365	.	+	0	Parent=comp118077_c0_seq1.mrna1
ChrX	gffcl	locus	75078697	75079778	.	-	.	ID=RLOC_00004227;geneIDs=comp67988_c0_seq1.path1,comp140433_c0_seq1.path1;transcripts=comp67988_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75078697	75079440	.	-	.	ID=comp67988_c0_seq1.mrna1;geneID=comp67988_c0_seq1.path1;Name=comp67988_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=744;mismatches=0;indels=0;unknowns=0;Target=comp67988_c0_seq1 744 1 .;CDS_Target=comp67988_c0_seq1 187 2 .;locus=RLOC_00004227
ChrX	stalkie_big_nohaplotig	exon	75078697	75079440	100	-	.	Parent=comp67988_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	75079254	75079439	.	-	0	Parent=comp67988_c0_seq1.mrna1
ChrX	gffcl	locus	75082077	75082535	.	-	.	ID=RLOC_00004228;geneIDs=comp142219_c0_seq1.path1;transcripts=comp142219_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75082077	75082535	.	-	.	ID=comp142219_c0_seq1.mrna1;geneID=comp142219_c0_seq1.path1;Name=comp142219_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=458;mismatches=1;indels=0;unknowns=0;Target=comp142219_c0_seq1 460 2 .;CDS_Target=comp142219_c0_seq1 452 396 .;locus=RLOC_00004228
ChrX	stalkie_big_nohaplotig	exon	75082077	75082535	99	-	.	Parent=comp142219_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	75082085	75082141	.	-	0	Parent=comp142219_c0_seq1.mrna1
ChrX	gffcl	locus	75083767	75084810	.	+	.	ID=RLOC_00004229;geneIDs=comp140268_c0_seq1.path1;transcripts=comp140268_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75083767	75084810	.	+	.	ID=comp140268_c0_seq1.mrna1;geneID=comp140268_c0_seq1.path1;Name=comp140268_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1044;mismatches=0;indels=4;unknowns=0;Target=comp140268_c0_seq1 1048 1 .;CDS_Target=comp140268_c0_seq1 553 428 .;locus=RLOC_00004229
ChrX	stalkie_big_nohaplotig	exon	75083767	75084810	99	+	.	Parent=comp140268_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	75084193	75084316	.	+	0	Parent=comp140268_c0_seq1.mrna1
ChrX	gffcl	locus	75087595	75088214	.	-	.	ID=RLOC_00004230;geneIDs=comp95564_c0_seq1.path1;transcripts=comp95564_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75087595	75088214	.	-	.	ID=comp95564_c0_seq1.mrna1;geneID=comp95564_c0_seq1.path1;Name=comp95564_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=620;mismatches=0;indels=0;unknowns=0;Target=comp95564_c0_seq1 620 1 .;CDS_Target=comp95564_c0_seq1 62 3 .;locus=RLOC_00004230
ChrX	stalkie_big_nohaplotig	exon	75087595	75088214	100	-	.	Parent=comp95564_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	75088153	75088212	.	-	0	Parent=comp95564_c0_seq1.mrna1
ChrX	gffcl	locus	75088658	75089197	.	+	.	ID=RLOC_00004231;geneIDs=comp113218_c1_seq1.path1;transcripts=comp113218_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75088658	75089197	.	+	.	ID=comp113218_c1_seq1.mrna1;geneID=comp113218_c1_seq1.path1;Name=comp113218_c1_seq1;Dir=indeterminatecoverage=99.4;identity=100.0;matches=540;mismatches=0;indels=0;unknowns=0;Target=comp113218_c1_seq1 540 1 .;CDS_Target=comp113218_c1_seq1 432 352 .;locus=RLOC_00004231
ChrX	stalkie_big_nohaplotig	exon	75088658	75089197	100	+	.	Parent=comp113218_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	75089009	75089089	.	+	0	Parent=comp113218_c1_seq1.mrna1
ChrX	gffcl	locus	75089328	75089543	.	+	.	ID=RLOC_00004232;geneIDs=comp964556_c0_seq1.path1;transcripts=comp964556_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75089328	75089543	.	+	.	ID=comp964556_c0_seq1.mrna1;geneID=comp964556_c0_seq1.path1;Name=comp964556_c0_seq1;Dir=indeterminatecoverage=90.0;identity=100.0;matches=216;mismatches=0;indels=0;unknowns=0;Target=comp964556_c0_seq1 240 25 .;CDS_Target=comp964556_c0_seq1 95 27 .;locus=RLOC_00004232
ChrX	stalkie_big_nohaplotig	exon	75089328	75089543	100	+	.	Parent=comp964556_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	75089330	75089398	.	+	0	Parent=comp964556_c0_seq1.mrna1
ChrX	gffcl	locus	75098298	75100508	.	+	.	ID=RLOC_00004233;geneIDs=FBgn0086444.1.path1;transcripts=FBgn0086444.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75098298	75100508	.	+	.	ID=FBgn0086444.1.mrna1;geneID=FBgn0086444.1.path1;Name=FBgn0086444.1;Dir=sensecoverage=100.0;identity=99.9;matches=1952;mismatches=0;indels=1;unknowns=0;Target=FBgn0086444.1 3 44 +;locus=RLOC_00004233
ChrX	stalkie_big_nohaplotig	exon	75098298	75098374	98	+	.	Parent=FBgn0086444.1.mrna1;Target=FBgn0086444.1 1 78 +
ChrX	stalkie_big_nohaplotig	exon	75098435	75098651	100	+	.	Parent=FBgn0086444.1.mrna1;Target=FBgn0086444.1 79 295 +
ChrX	stalkie_big_nohaplotig	exon	75098716	75098984	100	+	.	Parent=FBgn0086444.1.mrna1;Target=FBgn0086444.1 296 564 +
ChrX	stalkie_big_nohaplotig	exon	75099043	75099806	100	+	.	Parent=FBgn0086444.1.mrna1;Target=FBgn0086444.1 565 1328 +
ChrX	stalkie_big_nohaplotig	exon	75099884	75100508	100	+	.	Parent=FBgn0086444.1.mrna1;Target=FBgn0086444.1 1329 1953 +
ChrX	stalkie_big_nohaplotig	CDS	75098300	75098340	.	+	0	Parent=FBgn0086444.1.mrna1
ChrX	gffcl	locus	75106449	75108691	.	+	.	ID=RLOC_00004234;geneIDs=FBgn0002031.1.path1;transcripts=FBgn0002031.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75106449	75108691	.	+	.	ID=FBgn0002031.1.mrna1;geneID=FBgn0002031.1.path1;Name=FBgn0002031.1;Dir=sensecoverage=99.6;identity=100.0;matches=837;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004234
ChrX	stalkie_big_nohaplotig	exon	75106449	75106889	100	+	.	Parent=FBgn0002031.1.mrna1;Target=FBgn0002031.1 4 444 +
ChrX	stalkie_big_nohaplotig	exon	75108296	75108691	100	+	.	Parent=FBgn0002031.1.mrna1;Target=FBgn0002031.1 445 840 +
ChrX	stalkie_big_nohaplotig	CDS	75106449	75106889	.	+	0	Parent=FBgn0002031.1.mrna1;Target=FBgn0002031.1 4 444 +
ChrX	stalkie_big_nohaplotig	CDS	75108296	75108691	.	+	0	Parent=FBgn0002031.1.mrna1;Target=FBgn0002031.1 445 840 +
ChrX	gffcl	locus	75125459	75136696	.	.	.	ID=RLOC_00004235;geneIDs=FBgn0000422.1.path1,comp141045_c0_seq1.path1;transcripts=FBgn0000422.1.mrna1,comp141045_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75125459	75136696	.	+	.	ID=FBgn0000422.1.mrna1;geneID=FBgn0000422.1.path1;Name=FBgn0000422.1;Dir=sensecoverage=100.0;identity=100.0;matches=1461;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004235
ChrX	stalkie_big_nohaplotig	exon	75125459	75125485	100	+	.	Parent=FBgn0000422.1.mrna1;Target=FBgn0000422.1 1 27 +
ChrX	stalkie_big_nohaplotig	exon	75133176	75133261	100	+	.	Parent=FBgn0000422.1.mrna1;Target=FBgn0000422.1 28 113 +
ChrX	stalkie_big_nohaplotig	exon	75135245	75135878	100	+	.	Parent=FBgn0000422.1.mrna1;Target=FBgn0000422.1 114 747 +
ChrX	stalkie_big_nohaplotig	exon	75135983	75136696	100	+	.	Parent=FBgn0000422.1.mrna1;Target=FBgn0000422.1 748 1461 +
ChrX	stalkie_big_nohaplotig	CDS	75125459	75125485	.	+	0	Parent=FBgn0000422.1.mrna1;Target=FBgn0000422.1 1 27 +
ChrX	stalkie_big_nohaplotig	CDS	75133176	75133261	.	+	0	Parent=FBgn0000422.1.mrna1;Target=FBgn0000422.1 28 113 +
ChrX	stalkie_big_nohaplotig	CDS	75135245	75135878	.	+	1	Parent=FBgn0000422.1.mrna1;Target=FBgn0000422.1 114 747 +
ChrX	stalkie_big_nohaplotig	CDS	75135983	75136696	.	+	0	Parent=FBgn0000422.1.mrna1;Target=FBgn0000422.1 748 1461 +
ChrX	stalkie_big_nohaplotig	mRNA	75131904	75133196	.	-	.	ID=comp141045_c0_seq1.mrna1;geneID=comp141045_c0_seq1.path1;Name=comp141045_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1293;mismatches=0;indels=0;unknowns=0;Target=comp141045_c0_seq1 1293 1 .;CDS_Target=comp141045_c0_seq1 984 769 .;locus=RLOC_00004235
ChrX	stalkie_big_nohaplotig	exon	75131904	75133196	100	-	.	Parent=comp141045_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	75132213	75132428	.	-	0	Parent=comp141045_c0_seq1.mrna1
ChrX	gffcl	locus	75125617	75126986	.	+	.	ID=RLOC_00004236;geneIDs=comp137576_c0_seq1.path1;transcripts=comp137576_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75125617	75126986	.	+	.	ID=comp137576_c0_seq1.mrna1;geneID=comp137576_c0_seq1.path1;Name=comp137576_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1166;mismatches=0;indels=0;unknowns=0;Target=comp137576_c0_seq1 109 2 .;locus=RLOC_00004236
ChrX	stalkie_big_nohaplotig	exon	75125617	75126679	100	+	.	Parent=comp137576_c0_seq1.mrna1;Target=comp137576_c0_seq1 1063 1 .
ChrX	stalkie_big_nohaplotig	exon	75126884	75126986	100	+	.	Parent=comp137576_c0_seq1.mrna1;Target=comp137576_c0_seq1 1166 1064 .
ChrX	stalkie_big_nohaplotig	CDS	75125618	75125725	.	+	0	Parent=comp137576_c0_seq1.mrna1
ChrX	gffcl	locus	75133562	75134363	.	+	.	ID=RLOC_00004237;geneIDs=comp108803_c0_seq1.path1;transcripts=comp108803_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75133562	75134363	.	+	.	ID=comp108803_c0_seq1.mrna1;geneID=comp108803_c0_seq1.path1;Name=comp108803_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=802;mismatches=0;indels=0;unknowns=0;Target=comp108803_c0_seq1 802 1 .;CDS_Target=comp108803_c0_seq1 775 629 .;locus=RLOC_00004237
ChrX	stalkie_big_nohaplotig	exon	75133562	75134363	100	+	.	Parent=comp108803_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	75134190	75134336	.	+	0	Parent=comp108803_c0_seq1.mrna1
ChrX	gffcl	locus	75137528	75137581	.	+	.	ID=RLOC_00004238;geneIDs=comp155978_c0_seq1.path2;transcripts=comp155978_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	75137528	75137581	.	+	.	ID=comp155978_c0_seq1.mrna2;geneID=comp155978_c0_seq1.path2;Name=comp155978_c0_seq1;Dir=indeterminatecoverage=3.8;identity=100.0;matches=54;mismatches=0;indels=0;unknowns=0;Target=comp155978_c0_seq1 1414 1361 .;locus=RLOC_00004238
ChrX	stalkie_big_nohaplotig	exon	75137528	75137581	100	+	.	Parent=comp155978_c0_seq1.mrna2
ChrX	gffcl	locus	75138868	75146473	.	-	.	ID=RLOC_00004239;geneIDs=FBgn0002036.1.path1,comp126849_c0_seq1.path1;transcripts=FBgn0002036.1.mrna1,comp126849_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75138868	75140442	.	-	.	ID=FBgn0002036.1.mrna1;geneID=FBgn0002036.1.path1;Name=FBgn0002036.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1575;mismatches=0;indels=0;unknowns=0;Target=FBgn0002036.1 1575 1 .;locus=RLOC_00004239
ChrX	stalkie_big_nohaplotig	exon	75138868	75140442	100	-	.	Parent=FBgn0002036.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	75138868	75140442	.	-	0	Parent=FBgn0002036.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75140341	75146473	.	-	.	ID=comp126849_c0_seq1.mrna1;geneID=comp126849_c0_seq1.path1;Name=comp126849_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=409;mismatches=0;indels=0;unknowns=0;Target=comp126849_c0_seq1 295 408 .;locus=RLOC_00004239
ChrX	stalkie_big_nohaplotig	exon	75140341	75140362	100	-	.	Parent=comp126849_c0_seq1.mrna1;Target=comp126849_c0_seq1 1 22 -
ChrX	stalkie_big_nohaplotig	exon	75145509	75145605	100	-	.	Parent=comp126849_c0_seq1.mrna1;Target=comp126849_c0_seq1 23 119 -
ChrX	stalkie_big_nohaplotig	exon	75146184	75146473	100	-	.	Parent=comp126849_c0_seq1.mrna1;Target=comp126849_c0_seq1 120 409 -
ChrX	stalkie_big_nohaplotig	CDS	75146359	75146472	.	-	0	Parent=comp126849_c0_seq1.mrna1
ChrX	gffcl	locus	75190799	75192133	.	-	.	ID=RLOC_00004241;geneIDs=comp155579_c0_seq1.path1;transcripts=comp155579_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75190799	75192133	.	-	.	ID=comp155579_c0_seq1.mrna1;geneID=comp155579_c0_seq1.path1;Name=comp155579_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1334;mismatches=1;indels=0;unknowns=0;Target=comp155579_c0_seq1 1335 1 .;CDS_Target=comp155579_c0_seq1 1063 953 .;locus=RLOC_00004241
ChrX	stalkie_big_nohaplotig	exon	75190799	75192133	99	-	.	Parent=comp155579_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	75191071	75191181	.	-	0	Parent=comp155579_c0_seq1.mrna1
ChrX	gffcl	locus	75391072	75392533	.	+	.	ID=RLOC_00004243;geneIDs=comp207012_c0_seq1.path1;transcripts=comp207012_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75391072	75392533	.	+	.	ID=comp207012_c0_seq1.mrna1;geneID=comp207012_c0_seq1.path1;Name=comp207012_c0_seq1;Dir=indeterminatecoverage=96.7;identity=100.0;matches=647;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004243
ChrX	stalkie_big_nohaplotig	exon	75391072	75391712	100	+	.	Parent=comp207012_c0_seq1.mrna1;Target=comp207012_c0_seq1 641 1 .
ChrX	stalkie_big_nohaplotig	exon	75392528	75392533	100	+	.	Parent=comp207012_c0_seq1.mrna1;Target=comp207012_c0_seq1 647 642 .
ChrX	stalkie_big_nohaplotig	CDS	75391579	75391712	.	+	0	Parent=comp207012_c0_seq1.mrna1;Target=comp207012_c0_seq1 641 508 .
ChrX	stalkie_big_nohaplotig	CDS	75392528	75392531	.	+	1	Parent=comp207012_c0_seq1.mrna1;Target=comp207012_c0_seq1 645 642 .
ChrX	gffcl	locus	75418620	75420184	.	-	.	ID=RLOC_00004245;geneIDs=FBgn0261396.1.path1;transcripts=FBgn0261396.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75418620	75420184	.	-	.	ID=FBgn0261396.1.mrna1;geneID=FBgn0261396.1.path1;Name=FBgn0261396.1;Dir=sensecoverage=100.0;identity=100.0;matches=1497;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004245
ChrX	stalkie_big_nohaplotig	exon	75418620	75419934	100	-	.	Parent=FBgn0261396.1.mrna1;Target=FBgn0261396.1 183 1497 +
ChrX	stalkie_big_nohaplotig	exon	75420003	75420184	100	-	.	Parent=FBgn0261396.1.mrna1;Target=FBgn0261396.1 1 182 +
ChrX	stalkie_big_nohaplotig	CDS	75418620	75419934	.	-	1	Parent=FBgn0261396.1.mrna1;Target=FBgn0261396.1 183 1497 +
ChrX	stalkie_big_nohaplotig	CDS	75420003	75420184	.	-	0	Parent=FBgn0261396.1.mrna1;Target=FBgn0261396.1 1 182 +
ChrX	gffcl	locus	75436055	75437856	.	+	.	ID=RLOC_00004247;geneIDs=FBgn0033093.1.path1;transcripts=FBgn0033093.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75436055	75437856	.	+	.	ID=FBgn0033093.1.mrna1;geneID=FBgn0033093.1.path1;Name=FBgn0033093.1;Dir=sensecoverage=100.0;identity=100.0;matches=1539;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004247
ChrX	stalkie_big_nohaplotig	exon	75436055	75436450	100	+	.	Parent=FBgn0033093.1.mrna1;Target=FBgn0033093.1 1 396 +
ChrX	stalkie_big_nohaplotig	exon	75436515	75436815	100	+	.	Parent=FBgn0033093.1.mrna1;Target=FBgn0033093.1 397 697 +
ChrX	stalkie_big_nohaplotig	exon	75437015	75437856	100	+	.	Parent=FBgn0033093.1.mrna1;Target=FBgn0033093.1 698 1539 +
ChrX	stalkie_big_nohaplotig	CDS	75436055	75436450	.	+	0	Parent=FBgn0033093.1.mrna1;Target=FBgn0033093.1 1 396 +
ChrX	stalkie_big_nohaplotig	CDS	75436515	75436815	.	+	0	Parent=FBgn0033093.1.mrna1;Target=FBgn0033093.1 397 697 +
ChrX	stalkie_big_nohaplotig	CDS	75437015	75437856	.	+	2	Parent=FBgn0033093.1.mrna1;Target=FBgn0033093.1 698 1539 +
ChrX	gffcl	locus	75438240	75439149	.	+	.	ID=RLOC_00004248;geneIDs=comp152348_c0_seq1.path1;transcripts=comp152348_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75438240	75439149	.	+	.	ID=comp152348_c0_seq1.mrna1;geneID=comp152348_c0_seq1.path1;Name=comp152348_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.0;matches=901;mismatches=7;indels=2;unknowns=0;Target=comp152348_c0_seq1 908 1 .;CDS_Target=comp152348_c0_seq1 149 3 .;locus=RLOC_00004248
ChrX	stalkie_big_nohaplotig	exon	75438240	75439149	99	+	.	Parent=comp152348_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	75438242	75438390	.	+	0	Parent=comp152348_c0_seq1.mrna1
ChrX	gffcl	locus	75439164	75440012	.	-	.	ID=RLOC_00004249;geneIDs=AGAP008431.1.path1,comp146690_c0_seq1.path1;transcripts=comp146690_c0_seq1.mrna1,AGAP008431.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75439164	75440012	.	-	.	ID=comp146690_c0_seq1.mrna1;geneID=comp146690_c0_seq1.path1;Name=comp146690_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=663;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004249
ChrX	stalkie_big_nohaplotig	exon	75439164	75439474	100	-	.	Parent=comp146690_c0_seq1.mrna1;Target=comp146690_c0_seq1 353 663 +
ChrX	stalkie_big_nohaplotig	exon	75439534	75439631	100	-	.	Parent=comp146690_c0_seq1.mrna1;Target=comp146690_c0_seq1 255 352 +
ChrX	stalkie_big_nohaplotig	exon	75439699	75439862	100	-	.	Parent=comp146690_c0_seq1.mrna1;Target=comp146690_c0_seq1 91 254 +
ChrX	stalkie_big_nohaplotig	exon	75439923	75440012	100	-	.	Parent=comp146690_c0_seq1.mrna1;Target=comp146690_c0_seq1 1 90 +
ChrX	stalkie_big_nohaplotig	CDS	75439303	75439474	.	-	1	Parent=comp146690_c0_seq1.mrna1;Target=comp146690_c0_seq1 353 524 +
ChrX	stalkie_big_nohaplotig	CDS	75439534	75439631	.	-	0	Parent=comp146690_c0_seq1.mrna1;Target=comp146690_c0_seq1 255 352 +
ChrX	stalkie_big_nohaplotig	CDS	75439699	75439701	.	-	0	Parent=comp146690_c0_seq1.mrna1;Target=comp146690_c0_seq1 252 254 +
ChrX	stalkie_big_nohaplotig	mRNA	75439306	75439990	.	-	.	ID=AGAP008431.1.mrna1;geneID=AGAP008431.1.path1;Name=AGAP008431.1;Dir=sensecoverage=100.0;identity=100.0;matches=447;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004249
ChrX	stalkie_big_nohaplotig	exon	75439306	75439474	100	-	.	Parent=AGAP008431.1.mrna1;Target=AGAP008431.1 279 447 +
ChrX	stalkie_big_nohaplotig	exon	75439534	75439631	100	-	.	Parent=AGAP008431.1.mrna1;Target=AGAP008431.1 181 278 +
ChrX	stalkie_big_nohaplotig	exon	75439751	75439862	100	-	.	Parent=AGAP008431.1.mrna1;Target=AGAP008431.1 69 180 +
ChrX	stalkie_big_nohaplotig	exon	75439923	75439990	100	-	.	Parent=AGAP008431.1.mrna1;Target=AGAP008431.1 1 68 +
ChrX	stalkie_big_nohaplotig	CDS	75439306	75439474	.	-	1	Parent=AGAP008431.1.mrna1;Target=AGAP008431.1 279 447 +
ChrX	stalkie_big_nohaplotig	CDS	75439534	75439631	.	-	0	Parent=AGAP008431.1.mrna1;Target=AGAP008431.1 181 278 +
ChrX	stalkie_big_nohaplotig	CDS	75439751	75439862	.	-	1	Parent=AGAP008431.1.mrna1;Target=AGAP008431.1 69 180 +
ChrX	stalkie_big_nohaplotig	CDS	75439923	75439990	.	-	0	Parent=AGAP008431.1.mrna1;Target=AGAP008431.1 1 68 +
ChrX	gffcl	locus	75442299	75442665	.	+	.	ID=RLOC_00004250;geneIDs=FBgn0032153.1.path1;transcripts=FBgn0032153.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75442299	75442665	.	+	.	ID=FBgn0032153.1.mrna1;geneID=FBgn0032153.1.path1;Name=FBgn0032153.1;Dir=sensecoverage=100.0;identity=100.0;matches=306;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004250
ChrX	stalkie_big_nohaplotig	exon	75442299	75442477	100	+	.	Parent=FBgn0032153.1.mrna1;Target=FBgn0032153.1 1 179 +
ChrX	stalkie_big_nohaplotig	exon	75442539	75442665	100	+	.	Parent=FBgn0032153.1.mrna1;Target=FBgn0032153.1 180 306 +
ChrX	stalkie_big_nohaplotig	CDS	75442299	75442477	.	+	0	Parent=FBgn0032153.1.mrna1;Target=FBgn0032153.1 1 179 +
ChrX	stalkie_big_nohaplotig	CDS	75442539	75442665	.	+	1	Parent=FBgn0032153.1.mrna1;Target=FBgn0032153.1 180 306 +
ChrX	gffcl	locus	75442748	75444730	.	-	.	ID=RLOC_00004251;geneIDs=FBgn0032154.1.path1;transcripts=FBgn0032154.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75442748	75444730	.	-	.	ID=FBgn0032154.1.mrna1;geneID=FBgn0032154.1.path1;Name=FBgn0032154.1;Dir=sensecoverage=100.0;identity=100.0;matches=1858;mismatches=0;indels=0;unknowns=14;locus=RLOC_00004251
ChrX	stalkie_big_nohaplotig	exon	75442748	75443877	100	-	.	Parent=FBgn0032154.1.mrna1;Target=FBgn0032154.1 743 1872 +
ChrX	stalkie_big_nohaplotig	exon	75443932	75444363	100	-	.	Parent=FBgn0032154.1.mrna1;Target=FBgn0032154.1 311 742 +
ChrX	stalkie_big_nohaplotig	exon	75444421	75444730	100	-	.	Parent=FBgn0032154.1.mrna1;Target=FBgn0032154.1 1 310 +
ChrX	stalkie_big_nohaplotig	CDS	75442748	75443877	.	-	2	Parent=FBgn0032154.1.mrna1;Target=FBgn0032154.1 743 1872 +
ChrX	stalkie_big_nohaplotig	CDS	75443932	75444363	.	-	2	Parent=FBgn0032154.1.mrna1;Target=FBgn0032154.1 311 742 +
ChrX	stalkie_big_nohaplotig	CDS	75444421	75444730	.	-	0	Parent=FBgn0032154.1.mrna1;Target=FBgn0032154.1 1 310 +
ChrX	stalkie_big_nohaplotig	mRNA	75455777	75456572	.	-	.	ID=comp150149_c0_seq1.mrna1;geneID=comp150149_c0_seq1.path1;Name=comp150149_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=796;mismatches=0;indels=0;unknowns=0;Target=comp150149_c0_seq1 798 3 .;CDS_Target=comp150149_c0_seq1 178 53 .;locus=RLOC_00004252
ChrX	stalkie_big_nohaplotig	exon	75455777	75456572	100	-	.	Parent=comp150149_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	75456397	75456522	.	-	0	Parent=comp150149_c0_seq1.mrna1
ChrX	gffcl	locus	75465981	75466656	.	+	.	ID=RLOC_00004253;geneIDs=FBgn0032746.1.path1;transcripts=FBgn0032746.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75465981	75466656	.	+	.	ID=FBgn0032746.1.mrna1;geneID=FBgn0032746.1.path1;Name=FBgn0032746.1;Dir=sensecoverage=100.0;identity=99.8;matches=440;mismatches=0;indels=1;unknowns=0;locus=RLOC_00004253
ChrX	stalkie_big_nohaplotig	exon	75465981	75466010	96	+	.	Parent=FBgn0032746.1.mrna1;Target=FBgn0032746.1 1 31 +
ChrX	stalkie_big_nohaplotig	exon	75466187	75466361	100	+	.	Parent=FBgn0032746.1.mrna1;Target=FBgn0032746.1 32 206 +
ChrX	stalkie_big_nohaplotig	exon	75466422	75466656	100	+	.	Parent=FBgn0032746.1.mrna1;Target=FBgn0032746.1 207 441 +
ChrX	stalkie_big_nohaplotig	CDS	75465983	75466010	.	+	0	Parent=FBgn0032746.1.mrna1;Target=FBgn0032746.1 3 31 +
ChrX	stalkie_big_nohaplotig	CDS	75466187	75466226	.	+	2	Parent=FBgn0032746.1.mrna1;Target=FBgn0032746.1 32 71 +
ChrX	gffcl	locus	75468019	75472652	.	-	.	ID=RLOC_00004254;geneIDs=FBgn0029174.1.path1,comp847970_c0_seq1.path1;transcripts=FBgn0029174.1.mrna1,comp847970_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75468019	75472652	.	-	.	ID=FBgn0029174.1.mrna1;geneID=FBgn0029174.1.path1;Name=FBgn0029174.1;Dir=sensecoverage=100.0;identity=100.0;matches=1368;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004254
ChrX	stalkie_big_nohaplotig	exon	75468019	75468132	100	-	.	Parent=FBgn0029174.1.mrna1;Target=FBgn0029174.1 1255 1368 +
ChrX	stalkie_big_nohaplotig	exon	75468209	75468343	100	-	.	Parent=FBgn0029174.1.mrna1;Target=FBgn0029174.1 1120 1254 +
ChrX	stalkie_big_nohaplotig	exon	75468420	75468530	100	-	.	Parent=FBgn0029174.1.mrna1;Target=FBgn0029174.1 1009 1119 +
ChrX	stalkie_big_nohaplotig	exon	75469320	75469417	100	-	.	Parent=FBgn0029174.1.mrna1;Target=FBgn0029174.1 911 1008 +
ChrX	stalkie_big_nohaplotig	exon	75471252	75471402	100	-	.	Parent=FBgn0029174.1.mrna1;Target=FBgn0029174.1 760 910 +
ChrX	stalkie_big_nohaplotig	exon	75471457	75471565	100	-	.	Parent=FBgn0029174.1.mrna1;Target=FBgn0029174.1 651 759 +
ChrX	stalkie_big_nohaplotig	exon	75471627	75471765	100	-	.	Parent=FBgn0029174.1.mrna1;Target=FBgn0029174.1 512 650 +
ChrX	stalkie_big_nohaplotig	exon	75472021	75472141	100	-	.	Parent=FBgn0029174.1.mrna1;Target=FBgn0029174.1 391 511 +
ChrX	stalkie_big_nohaplotig	exon	75472194	75472336	100	-	.	Parent=FBgn0029174.1.mrna1;Target=FBgn0029174.1 248 390 +
ChrX	stalkie_big_nohaplotig	exon	75472406	75472652	100	-	.	Parent=FBgn0029174.1.mrna1;Target=FBgn0029174.1 1 247 +
ChrX	stalkie_big_nohaplotig	CDS	75468019	75468132	.	-	0	Parent=FBgn0029174.1.mrna1;Target=FBgn0029174.1 1255 1368 +
ChrX	stalkie_big_nohaplotig	CDS	75468209	75468343	.	-	0	Parent=FBgn0029174.1.mrna1;Target=FBgn0029174.1 1120 1254 +
ChrX	stalkie_big_nohaplotig	CDS	75468420	75468530	.	-	0	Parent=FBgn0029174.1.mrna1;Target=FBgn0029174.1 1009 1119 +
ChrX	stalkie_big_nohaplotig	CDS	75469320	75469417	.	-	2	Parent=FBgn0029174.1.mrna1;Target=FBgn0029174.1 911 1008 +
ChrX	stalkie_big_nohaplotig	CDS	75471252	75471402	.	-	0	Parent=FBgn0029174.1.mrna1;Target=FBgn0029174.1 760 910 +
ChrX	stalkie_big_nohaplotig	CDS	75471457	75471565	.	-	1	Parent=FBgn0029174.1.mrna1;Target=FBgn0029174.1 651 759 +
ChrX	stalkie_big_nohaplotig	CDS	75471627	75471765	.	-	2	Parent=FBgn0029174.1.mrna1;Target=FBgn0029174.1 512 650 +
ChrX	stalkie_big_nohaplotig	CDS	75472021	75472141	.	-	0	Parent=FBgn0029174.1.mrna1;Target=FBgn0029174.1 391 511 +
ChrX	stalkie_big_nohaplotig	CDS	75472194	75472336	.	-	2	Parent=FBgn0029174.1.mrna1;Target=FBgn0029174.1 248 390 +
ChrX	stalkie_big_nohaplotig	CDS	75472406	75472652	.	-	0	Parent=FBgn0029174.1.mrna1;Target=FBgn0029174.1 1 247 +
ChrX	stalkie_big_nohaplotig	mRNA	75468507	75469342	.	-	.	ID=comp847970_c0_seq1.mrna1;geneID=comp847970_c0_seq1.path1;Name=comp847970_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=836;mismatches=0;indels=0;unknowns=0;Target=comp847970_c0_seq1 836 1 .;CDS_Target=comp847970_c0_seq1 125 3 .;locus=RLOC_00004254
ChrX	stalkie_big_nohaplotig	exon	75468507	75469342	100	-	.	Parent=comp847970_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	75469218	75469340	.	-	0	Parent=comp847970_c0_seq1.mrna1
ChrX	gffcl	locus	75493581	75496647	.	+	.	ID=RLOC_00004256;geneIDs=comp152818_c0_seq1.path1;transcripts=comp152818_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75493581	75496647	.	+	.	ID=comp152818_c0_seq1.mrna1;geneID=comp152818_c0_seq1.path1;Name=comp152818_c0_seq1;Dir=antisensecoverage=98.6;identity=99.0;matches=1178;mismatches=10;indels=2;unknowns=0;Target=comp152818_c0_seq1 689 772 .;locus=RLOC_00004256
ChrX	stalkie_big_nohaplotig	exon	75493581	75494163	97	+	.	Parent=comp152818_c0_seq1.mrna1;Target=comp152818_c0_seq1 621 1205 -
ChrX	stalkie_big_nohaplotig	exon	75496043	75496647	100	+	.	Parent=comp152818_c0_seq1.mrna1;Target=comp152818_c0_seq1 16 620 -
ChrX	stalkie_big_nohaplotig	CDS	75494013	75494095	.	+	0	Parent=comp152818_c0_seq1.mrna1
ChrX	gffcl	locus	75509571	75532175	.	+	.	ID=RLOC_00004257;geneIDs=FBgn0032209.1.path1;transcripts=FBgn0032209.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75509571	75532175	.	+	.	ID=FBgn0032209.1.mrna1;geneID=FBgn0032209.1.path1;Name=FBgn0032209.1;Dir=sensecoverage=100.0;identity=100.0;matches=687;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004257
ChrX	stalkie_big_nohaplotig	exon	75509571	75509682	100	+	.	Parent=FBgn0032209.1.mrna1;Target=FBgn0032209.1 1 112 +
ChrX	stalkie_big_nohaplotig	exon	75514670	75514813	100	+	.	Parent=FBgn0032209.1.mrna1;Target=FBgn0032209.1 113 256 +
ChrX	stalkie_big_nohaplotig	exon	75519061	75519257	100	+	.	Parent=FBgn0032209.1.mrna1;Target=FBgn0032209.1 257 453 +
ChrX	stalkie_big_nohaplotig	exon	75520504	75520659	100	+	.	Parent=FBgn0032209.1.mrna1;Target=FBgn0032209.1 454 609 +
ChrX	stalkie_big_nohaplotig	exon	75532098	75532175	100	+	.	Parent=FBgn0032209.1.mrna1;Target=FBgn0032209.1 610 687 +
ChrX	stalkie_big_nohaplotig	CDS	75509571	75509682	.	+	0	Parent=FBgn0032209.1.mrna1;Target=FBgn0032209.1 1 112 +
ChrX	stalkie_big_nohaplotig	CDS	75514670	75514813	.	+	2	Parent=FBgn0032209.1.mrna1;Target=FBgn0032209.1 113 256 +
ChrX	stalkie_big_nohaplotig	CDS	75519061	75519257	.	+	2	Parent=FBgn0032209.1.mrna1;Target=FBgn0032209.1 257 453 +
ChrX	stalkie_big_nohaplotig	CDS	75520504	75520659	.	+	0	Parent=FBgn0032209.1.mrna1;Target=FBgn0032209.1 454 609 +
ChrX	stalkie_big_nohaplotig	CDS	75532098	75532175	.	+	0	Parent=FBgn0032209.1.mrna1;Target=FBgn0032209.1 610 687 +
ChrX	gffcl	locus	75549719	75556086	.	+	.	ID=RLOC_00004258;geneIDs=FBgn0058196.1.path1,comp147767_c0_seq1.path1;transcripts=FBgn0058196.1.mrna1,comp147767_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75549719	75556086	.	+	.	ID=FBgn0058196.1.mrna1;geneID=FBgn0058196.1.path1;Name=FBgn0058196.1;Dir=sensecoverage=100.0;identity=100.0;matches=699;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004258
ChrX	stalkie_big_nohaplotig	exon	75549719	75550087	100	+	.	Parent=FBgn0058196.1.mrna1;Target=FBgn0058196.1 1 369 +
ChrX	stalkie_big_nohaplotig	exon	75555690	75555967	100	+	.	Parent=FBgn0058196.1.mrna1;Target=FBgn0058196.1 370 647 +
ChrX	stalkie_big_nohaplotig	exon	75556035	75556086	100	+	.	Parent=FBgn0058196.1.mrna1;Target=FBgn0058196.1 648 699 +
ChrX	stalkie_big_nohaplotig	CDS	75549719	75550087	.	+	0	Parent=FBgn0058196.1.mrna1;Target=FBgn0058196.1 1 369 +
ChrX	stalkie_big_nohaplotig	CDS	75555690	75555967	.	+	0	Parent=FBgn0058196.1.mrna1;Target=FBgn0058196.1 370 647 +
ChrX	stalkie_big_nohaplotig	CDS	75556035	75556086	.	+	1	Parent=FBgn0058196.1.mrna1;Target=FBgn0058196.1 648 699 +
ChrX	stalkie_big_nohaplotig	mRNA	75550064	75555712	.	+	.	ID=comp147767_c0_seq1.mrna1;geneID=comp147767_c0_seq1.path1;Name=comp147767_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=896;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004258
ChrX	stalkie_big_nohaplotig	exon	75550064	75550087	100	+	.	Parent=comp147767_c0_seq1.mrna1;Target=comp147767_c0_seq1 873 896 -
ChrX	stalkie_big_nohaplotig	exon	75554841	75555712	100	+	.	Parent=comp147767_c0_seq1.mrna1;Target=comp147767_c0_seq1 1 872 -
ChrX	stalkie_big_nohaplotig	CDS	75550066	75550087	.	+	0	Parent=comp147767_c0_seq1.mrna1;Target=comp147767_c0_seq1 873 894 .
ChrX	stalkie_big_nohaplotig	CDS	75554841	75554926	.	+	2	Parent=comp147767_c0_seq1.mrna1;Target=comp147767_c0_seq1 787 872 .
ChrX	gffcl	locus	75551425	75552101	.	+	.	ID=RLOC_00004259;geneIDs=comp143082_c0_seq1.path1;transcripts=comp143082_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75551425	75552101	.	+	.	ID=comp143082_c0_seq1.mrna1;geneID=comp143082_c0_seq1.path1;Name=comp143082_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.9;matches=676;mismatches=1;indels=0;unknowns=0;Target=comp143082_c0_seq1 679 3 .;CDS_Target=comp143082_c0_seq1 90 4 .;locus=RLOC_00004259
ChrX	stalkie_big_nohaplotig	exon	75551425	75552101	99	+	.	Parent=comp143082_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	75551426	75551512	.	+	0	Parent=comp143082_c0_seq1.mrna1
ChrX	gffcl	locus	75552157	75554319	.	+	.	ID=RLOC_00004260;geneIDs=comp158394_c0_seq1.path1;transcripts=comp158394_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75552157	75554319	.	+	.	ID=comp158394_c0_seq1.mrna1;geneID=comp158394_c0_seq1.path1;Name=comp158394_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=2160;mismatches=3;indels=1;unknowns=0;Target=comp158394_c0_seq1 2165 2 .;CDS_Target=comp158394_c0_seq1 1330 1229 .;locus=RLOC_00004260
ChrX	stalkie_big_nohaplotig	exon	75552157	75554319	99	+	.	Parent=comp158394_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	75553384	75553485	.	+	0	Parent=comp158394_c0_seq1.mrna1
ChrX	gffcl	locus	75556953	75559429	.	-	.	ID=RLOC_00004261;geneIDs=comp156161_c0_seq1.path1;transcripts=comp156161_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75556953	75559429	.	-	.	ID=comp156161_c0_seq1.mrna1;geneID=comp156161_c0_seq1.path1;Name=comp156161_c0_seq1;Dir=antisensecoverage=99.3;identity=98.4;matches=2408;mismatches=2;indels=37;unknowns=0;Target=comp156161_c0_seq1 1194 1292 .;locus=RLOC_00004261
ChrX	stalkie_big_nohaplotig	exon	75556953	75557050	100	-	.	Parent=comp156161_c0_seq1.mrna1;Target=comp156161_c0_seq1 1 98 -
ChrX	stalkie_big_nohaplotig	exon	75557118	75559429	98	-	.	Parent=comp156161_c0_seq1.mrna1;Target=comp156161_c0_seq1 99 2447 -
ChrX	stalkie_big_nohaplotig	CDS	75558176	75558274	.	-	0	Parent=comp156161_c0_seq1.mrna1
ChrX	gffcl	locus	75564804	75572629	.	-	.	ID=RLOC_00004262;geneIDs=FBgn0028541.1.path1;transcripts=FBgn0028541.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75564804	75572629	.	-	.	ID=FBgn0028541.1.mrna1;geneID=FBgn0028541.1.path1;Name=FBgn0028541.1;Dir=sensecoverage=100.0;identity=100.0;matches=1926;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004262
ChrX	stalkie_big_nohaplotig	exon	75564804	75564901	100	-	.	Parent=FBgn0028541.1.mrna1;Target=FBgn0028541.1 1829 1926 +
ChrX	stalkie_big_nohaplotig	exon	75567468	75567606	100	-	.	Parent=FBgn0028541.1.mrna1;Target=FBgn0028541.1 1690 1828 +
ChrX	stalkie_big_nohaplotig	exon	75567665	75567848	100	-	.	Parent=FBgn0028541.1.mrna1;Target=FBgn0028541.1 1506 1689 +
ChrX	stalkie_big_nohaplotig	exon	75567902	75568129	100	-	.	Parent=FBgn0028541.1.mrna1;Target=FBgn0028541.1 1278 1505 +
ChrX	stalkie_big_nohaplotig	exon	75568741	75568930	100	-	.	Parent=FBgn0028541.1.mrna1;Target=FBgn0028541.1 1088 1277 +
ChrX	stalkie_big_nohaplotig	exon	75568986	75569189	100	-	.	Parent=FBgn0028541.1.mrna1;Target=FBgn0028541.1 884 1087 +
ChrX	stalkie_big_nohaplotig	exon	75570679	75570844	100	-	.	Parent=FBgn0028541.1.mrna1;Target=FBgn0028541.1 718 883 +
ChrX	stalkie_big_nohaplotig	exon	75571639	75571750	100	-	.	Parent=FBgn0028541.1.mrna1;Target=FBgn0028541.1 606 717 +
ChrX	stalkie_big_nohaplotig	exon	75571812	75571970	100	-	.	Parent=FBgn0028541.1.mrna1;Target=FBgn0028541.1 447 605 +
ChrX	stalkie_big_nohaplotig	exon	75572031	75572416	100	-	.	Parent=FBgn0028541.1.mrna1;Target=FBgn0028541.1 61 446 +
ChrX	stalkie_big_nohaplotig	exon	75572570	75572629	100	-	.	Parent=FBgn0028541.1.mrna1;Target=FBgn0028541.1 1 60 +
ChrX	stalkie_big_nohaplotig	CDS	75564804	75564901	.	-	2	Parent=FBgn0028541.1.mrna1;Target=FBgn0028541.1 1829 1926 +
ChrX	stalkie_big_nohaplotig	CDS	75567468	75567606	.	-	0	Parent=FBgn0028541.1.mrna1;Target=FBgn0028541.1 1690 1828 +
ChrX	stalkie_big_nohaplotig	CDS	75567665	75567848	.	-	1	Parent=FBgn0028541.1.mrna1;Target=FBgn0028541.1 1506 1689 +
ChrX	stalkie_big_nohaplotig	CDS	75567902	75568129	.	-	1	Parent=FBgn0028541.1.mrna1;Target=FBgn0028541.1 1278 1505 +
ChrX	stalkie_big_nohaplotig	CDS	75568741	75568930	.	-	2	Parent=FBgn0028541.1.mrna1;Target=FBgn0028541.1 1088 1277 +
ChrX	stalkie_big_nohaplotig	CDS	75568986	75569189	.	-	2	Parent=FBgn0028541.1.mrna1;Target=FBgn0028541.1 884 1087 +
ChrX	stalkie_big_nohaplotig	CDS	75570679	75570844	.	-	0	Parent=FBgn0028541.1.mrna1;Target=FBgn0028541.1 718 883 +
ChrX	stalkie_big_nohaplotig	CDS	75571639	75571750	.	-	1	Parent=FBgn0028541.1.mrna1;Target=FBgn0028541.1 606 717 +
ChrX	stalkie_big_nohaplotig	CDS	75571812	75571970	.	-	1	Parent=FBgn0028541.1.mrna1;Target=FBgn0028541.1 447 605 +
ChrX	stalkie_big_nohaplotig	CDS	75572031	75572416	.	-	0	Parent=FBgn0028541.1.mrna1;Target=FBgn0028541.1 61 446 +
ChrX	stalkie_big_nohaplotig	CDS	75572570	75572629	.	-	0	Parent=FBgn0028541.1.mrna1;Target=FBgn0028541.1 1 60 +
ChrX	gffcl	locus	75577218	75582690	.	+	.	ID=RLOC_00004263;geneIDs=FBgn0032796.1.path1;transcripts=FBgn0032796.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75577218	75582690	.	+	.	ID=FBgn0032796.1.mrna1;geneID=FBgn0032796.1.path1;Name=FBgn0032796.1;Dir=sensecoverage=100.0;identity=100.0;matches=4212;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004263
ChrX	stalkie_big_nohaplotig	exon	75577218	75577908	100	+	.	Parent=FBgn0032796.1.mrna1;Target=FBgn0032796.1 1 691 +
ChrX	stalkie_big_nohaplotig	exon	75579170	75582690	100	+	.	Parent=FBgn0032796.1.mrna1;Target=FBgn0032796.1 692 4212 +
ChrX	stalkie_big_nohaplotig	CDS	75577218	75577908	.	+	0	Parent=FBgn0032796.1.mrna1;Target=FBgn0032796.1 1 691 +
ChrX	stalkie_big_nohaplotig	CDS	75579170	75582690	.	+	2	Parent=FBgn0032796.1.mrna1;Target=FBgn0032796.1 692 4212 +
ChrX	gffcl	locus	75589701	75591246	.	+	.	ID=RLOC_00004264;geneIDs=FBgn0028530.1.path1;transcripts=FBgn0028530.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75589701	75591246	.	+	.	ID=FBgn0028530.1.mrna1;geneID=FBgn0028530.1.path1;Name=FBgn0028530.1;Dir=sensecoverage=100.0;identity=100.0;matches=1296;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004264
ChrX	stalkie_big_nohaplotig	exon	75589701	75590157	100	+	.	Parent=FBgn0028530.1.mrna1;Target=FBgn0028530.1 1 457 +
ChrX	stalkie_big_nohaplotig	exon	75590213	75590642	100	+	.	Parent=FBgn0028530.1.mrna1;Target=FBgn0028530.1 458 887 +
ChrX	stalkie_big_nohaplotig	exon	75590784	75590931	100	+	.	Parent=FBgn0028530.1.mrna1;Target=FBgn0028530.1 888 1035 +
ChrX	stalkie_big_nohaplotig	exon	75590986	75591246	100	+	.	Parent=FBgn0028530.1.mrna1;Target=FBgn0028530.1 1036 1296 +
ChrX	stalkie_big_nohaplotig	CDS	75589701	75590157	.	+	0	Parent=FBgn0028530.1.mrna1;Target=FBgn0028530.1 1 457 +
ChrX	stalkie_big_nohaplotig	CDS	75590213	75590642	.	+	2	Parent=FBgn0028530.1.mrna1;Target=FBgn0028530.1 458 887 +
ChrX	stalkie_big_nohaplotig	CDS	75590784	75590931	.	+	1	Parent=FBgn0028530.1.mrna1;Target=FBgn0028530.1 888 1035 +
ChrX	stalkie_big_nohaplotig	CDS	75590986	75591246	.	+	0	Parent=FBgn0028530.1.mrna1;Target=FBgn0028530.1 1036 1296 +
ChrX	gffcl	locus	75594354	75595628	.	+	.	ID=RLOC_00004265;geneIDs=ORF1366.path2;transcripts=ORF1366.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	75594354	75595628	.	+	.	ID=ORF1366.mrna2;geneID=ORF1366.path2;Name=ORF1366;Dir=sensecoverage=100.0;identity=99.9;matches=1124;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004265
ChrX	stalkie_big_nohaplotig	exon	75594354	75594423	100	+	.	Parent=ORF1366.mrna2;Target=ORF1366 1 70 +
ChrX	stalkie_big_nohaplotig	exon	75594505	75594624	100	+	.	Parent=ORF1366.mrna2;Target=ORF1366 71 190 +
ChrX	stalkie_big_nohaplotig	exon	75594694	75595628	99	+	.	Parent=ORF1366.mrna2;Target=ORF1366 191 1125 +
ChrX	stalkie_big_nohaplotig	CDS	75594354	75594423	.	+	0	Parent=ORF1366.mrna2;Target=ORF1366 1 70 +
ChrX	stalkie_big_nohaplotig	CDS	75594505	75594624	.	+	2	Parent=ORF1366.mrna2;Target=ORF1366 71 190 +
ChrX	stalkie_big_nohaplotig	CDS	75594694	75595628	.	+	2	Parent=ORF1366.mrna2;Target=ORF1366 191 1125 +
ChrX	gffcl	locus	75603766	75604151	.	-	.	ID=RLOC_00004267;geneIDs=comp163208_c1_seq1.path1;transcripts=comp163208_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75603766	75604151	.	-	.	ID=comp163208_c1_seq1.mrna1;geneID=comp163208_c1_seq1.path1;Name=comp163208_c1_seq1;Dir=antisensecoverage=100.0;identity=98.5;matches=256;mismatches=4;indels=0;unknowns=0;locus=RLOC_00004267
ChrX	stalkie_big_nohaplotig	exon	75603766	75603849	100	-	.	Parent=comp163208_c1_seq1.mrna1;Target=comp163208_c1_seq1 1 84 -
ChrX	stalkie_big_nohaplotig	exon	75603908	75604065	97	-	.	Parent=comp163208_c1_seq1.mrna1;Target=comp163208_c1_seq1 85 242 -
ChrX	stalkie_big_nohaplotig	exon	75604134	75604151	100	-	.	Parent=comp163208_c1_seq1.mrna1;Target=comp163208_c1_seq1 243 260 -
ChrX	stalkie_big_nohaplotig	CDS	75603910	75604065	.	-	0	Parent=comp163208_c1_seq1.mrna1;Target=comp163208_c1_seq1 87 242 .
ChrX	stalkie_big_nohaplotig	CDS	75604134	75604151	.	-	0	Parent=comp163208_c1_seq1.mrna1;Target=comp163208_c1_seq1 243 260 .
ChrX	gffcl	locus	75605010	75606370	.	-	.	ID=RLOC_00004268;geneIDs=FBgn0263594.2.path1;transcripts=FBgn0263594.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75605010	75606370	.	-	.	ID=FBgn0263594.2.mrna1;geneID=FBgn0263594.2.path1;Name=FBgn0263594.2;Dir=sensecoverage=100.0;identity=99.5;matches=1286;mismatches=7;indels=0;unknowns=0;locus=RLOC_00004268
ChrX	stalkie_big_nohaplotig	exon	75605010	75605272	100	-	.	Parent=FBgn0263594.2.mrna1;Target=FBgn0263594.2 1031 1293 +
ChrX	stalkie_big_nohaplotig	exon	75605341	75606370	99	-	.	Parent=FBgn0263594.2.mrna1;Target=FBgn0263594.2 1 1030 +
ChrX	stalkie_big_nohaplotig	CDS	75605010	75605272	.	-	2	Parent=FBgn0263594.2.mrna1;Target=FBgn0263594.2 1031 1293 +
ChrX	stalkie_big_nohaplotig	CDS	75605341	75606370	.	-	0	Parent=FBgn0263594.2.mrna1;Target=FBgn0263594.2 1 1030 +
ChrX	gffcl	locus	75612183	75654540	.	+	.	ID=RLOC_00004269;geneIDs=FBgn0028916.1.path1;transcripts=FBgn0028916.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75612183	75654540	.	+	.	ID=FBgn0028916.1.mrna1;geneID=FBgn0028916.1.path1;Name=FBgn0028916.1;Dir=sensecoverage=100.0;identity=100.0;matches=2718;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004269
ChrX	stalkie_big_nohaplotig	exon	75612183	75612394	100	+	.	Parent=FBgn0028916.1.mrna1;Target=FBgn0028916.1 1 212 +
ChrX	stalkie_big_nohaplotig	exon	75648741	75649010	100	+	.	Parent=FBgn0028916.1.mrna1;Target=FBgn0028916.1 213 482 +
ChrX	stalkie_big_nohaplotig	exon	75650814	75651331	100	+	.	Parent=FBgn0028916.1.mrna1;Target=FBgn0028916.1 483 1000 +
ChrX	stalkie_big_nohaplotig	exon	75651476	75651731	100	+	.	Parent=FBgn0028916.1.mrna1;Target=FBgn0028916.1 1001 1256 +
ChrX	stalkie_big_nohaplotig	exon	75651797	75651919	100	+	.	Parent=FBgn0028916.1.mrna1;Target=FBgn0028916.1 1257 1379 +
ChrX	stalkie_big_nohaplotig	exon	75651999	75652113	100	+	.	Parent=FBgn0028916.1.mrna1;Target=FBgn0028916.1 1380 1494 +
ChrX	stalkie_big_nohaplotig	exon	75652176	75652545	100	+	.	Parent=FBgn0028916.1.mrna1;Target=FBgn0028916.1 1495 1864 +
ChrX	stalkie_big_nohaplotig	exon	75652610	75653064	100	+	.	Parent=FBgn0028916.1.mrna1;Target=FBgn0028916.1 1865 2319 +
ChrX	stalkie_big_nohaplotig	exon	75653977	75654186	100	+	.	Parent=FBgn0028916.1.mrna1;Target=FBgn0028916.1 2320 2529 +
ChrX	stalkie_big_nohaplotig	exon	75654352	75654540	100	+	.	Parent=FBgn0028916.1.mrna1;Target=FBgn0028916.1 2530 2718 +
ChrX	stalkie_big_nohaplotig	CDS	75612183	75612394	.	+	0	Parent=FBgn0028916.1.mrna1;Target=FBgn0028916.1 1 212 +
ChrX	stalkie_big_nohaplotig	CDS	75648741	75649010	.	+	1	Parent=FBgn0028916.1.mrna1;Target=FBgn0028916.1 213 482 +
ChrX	stalkie_big_nohaplotig	CDS	75650814	75651331	.	+	1	Parent=FBgn0028916.1.mrna1;Target=FBgn0028916.1 483 1000 +
ChrX	stalkie_big_nohaplotig	CDS	75651476	75651731	.	+	2	Parent=FBgn0028916.1.mrna1;Target=FBgn0028916.1 1001 1256 +
ChrX	stalkie_big_nohaplotig	CDS	75651797	75651919	.	+	1	Parent=FBgn0028916.1.mrna1;Target=FBgn0028916.1 1257 1379 +
ChrX	stalkie_big_nohaplotig	CDS	75651999	75652113	.	+	1	Parent=FBgn0028916.1.mrna1;Target=FBgn0028916.1 1380 1494 +
ChrX	stalkie_big_nohaplotig	CDS	75652176	75652545	.	+	0	Parent=FBgn0028916.1.mrna1;Target=FBgn0028916.1 1495 1864 +
ChrX	stalkie_big_nohaplotig	CDS	75652610	75653064	.	+	2	Parent=FBgn0028916.1.mrna1;Target=FBgn0028916.1 1865 2319 +
ChrX	stalkie_big_nohaplotig	CDS	75653977	75654186	.	+	0	Parent=FBgn0028916.1.mrna1;Target=FBgn0028916.1 2320 2529 +
ChrX	stalkie_big_nohaplotig	CDS	75654352	75654540	.	+	0	Parent=FBgn0028916.1.mrna1;Target=FBgn0028916.1 2530 2718 +
ChrX	gffcl	locus	75637917	75639415	.	-	.	ID=RLOC_00004270;geneIDs=ORF704.path1;transcripts=ORF704.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75637917	75639415	.	-	.	ID=ORF704.mrna1;geneID=ORF704.path1;Name=ORF704;Dir=indeterminatecoverage=99.3;identity=99.9;matches=1498;mismatches=1;indels=0;unknowns=0;Target=ORF704 1509 11 .;CDS_Target=ORF704 1509 13 .;locus=RLOC_00004270
ChrX	stalkie_big_nohaplotig	exon	75637917	75639415	99	-	.	Parent=ORF704.mrna1
ChrX	stalkie_big_nohaplotig	CDS	75637917	75639413	.	-	0	Parent=ORF704.mrna1
ChrX	gffcl	locus	75657118	75657786	.	+	.	ID=RLOC_00004271;geneIDs=comp154401_c0_seq1.path1;transcripts=comp154401_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75657118	75657786	.	+	.	ID=comp154401_c0_seq1.mrna1;geneID=comp154401_c0_seq1.path1;Name=comp154401_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=664;mismatches=5;indels=0;unknowns=0;Target=comp154401_c0_seq1 669 1 .;CDS_Target=comp154401_c0_seq1 276 205 .;locus=RLOC_00004271
ChrX	stalkie_big_nohaplotig	exon	75657118	75657786	99	+	.	Parent=comp154401_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	75657322	75657393	.	+	0	Parent=comp154401_c0_seq1.mrna1
ChrX	gffcl	locus	75660120	75660500	.	+	.	ID=RLOC_00004272;geneIDs=comp163208_c1_seq1.path2;transcripts=comp163208_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	75660120	75660500	.	+	.	ID=comp163208_c1_seq1.mrna2;geneID=comp163208_c1_seq1.path2;Name=comp163208_c1_seq1;Dir=antisensecoverage=100.0;identity=95.8;matches=249;mismatches=7;indels=4;unknowns=0;locus=RLOC_00004272
ChrX	stalkie_big_nohaplotig	exon	75660120	75660137	100	+	.	Parent=comp163208_c1_seq1.mrna2;Target=comp163208_c1_seq1 243 260 -
ChrX	stalkie_big_nohaplotig	exon	75660206	75660359	94	+	.	Parent=comp163208_c1_seq1.mrna2;Target=comp163208_c1_seq1 85 242 -
ChrX	stalkie_big_nohaplotig	exon	75660417	75660500	97	+	.	Parent=comp163208_c1_seq1.mrna2;Target=comp163208_c1_seq1 1 84 -
ChrX	stalkie_big_nohaplotig	CDS	75660120	75660137	.	+	0	Parent=comp163208_c1_seq1.mrna2;Target=comp163208_c1_seq1 243 260 .
ChrX	stalkie_big_nohaplotig	CDS	75660206	75660357	.	+	0	Parent=comp163208_c1_seq1.mrna2;Target=comp163208_c1_seq1 87 242 .
ChrX	gffcl	locus	75662899	75664173	.	-	.	ID=RLOC_00004273;geneIDs=ORF1366.path3;transcripts=ORF1366.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	75662899	75664173	.	-	.	ID=ORF1366.mrna3;geneID=ORF1366.path3;Name=ORF1366;Dir=sensecoverage=100.0;identity=99.6;matches=1121;mismatches=4;indels=0;unknowns=0;locus=RLOC_00004273
ChrX	stalkie_big_nohaplotig	exon	75662899	75663833	99	-	.	Parent=ORF1366.mrna3;Target=ORF1366 191 1125 +
ChrX	stalkie_big_nohaplotig	exon	75663903	75664022	98	-	.	Parent=ORF1366.mrna3;Target=ORF1366 71 190 +
ChrX	stalkie_big_nohaplotig	exon	75664104	75664173	100	-	.	Parent=ORF1366.mrna3;Target=ORF1366 1 70 +
ChrX	stalkie_big_nohaplotig	CDS	75662899	75663833	.	-	2	Parent=ORF1366.mrna3;Target=ORF1366 191 1125 +
ChrX	stalkie_big_nohaplotig	CDS	75663903	75664022	.	-	2	Parent=ORF1366.mrna3;Target=ORF1366 71 190 +
ChrX	stalkie_big_nohaplotig	CDS	75664104	75664173	.	-	0	Parent=ORF1366.mrna3;Target=ORF1366 1 70 +
ChrX	gffcl	locus	75792584	75793908	.	+	.	ID=RLOC_00004274;geneIDs=ORF942.path1;transcripts=ORF942.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75792584	75793908	.	+	.	ID=ORF942.mrna1;geneID=ORF942.path1;Name=ORF942;Dir=indeterminatecoverage=99.3;identity=100.0;matches=1325;mismatches=0;indels=0;unknowns=0;Target=ORF942 1335 11 .;CDS_Target=ORF942 1335 13 .;locus=RLOC_00004274
ChrX	stalkie_big_nohaplotig	exon	75792584	75793908	100	+	.	Parent=ORF942.mrna1
ChrX	stalkie_big_nohaplotig	CDS	75792586	75793908	.	+	0	Parent=ORF942.mrna1
ChrX	gffcl	locus	75812844	75813543	.	+	.	ID=RLOC_00004275;geneIDs=comp156591_c0_seq1.path9;transcripts=comp156591_c0_seq1.mrna9
ChrX	stalkie_big_nohaplotig	mRNA	75812844	75813543	.	+	.	ID=comp156591_c0_seq1.mrna9;geneID=comp156591_c0_seq1.path9;Name=comp156591_c0_seq1;Dir=indeterminatecoverage=90.9;identity=96.8;matches=686;mismatches=14;indels=9;unknowns=0;Target=comp156591_c0_seq1 780 72 .;CDS_Target=comp156591_c0_seq1 105 73 .;locus=RLOC_00004275
ChrX	stalkie_big_nohaplotig	exon	75812844	75813543	96	+	.	Parent=comp156591_c0_seq1.mrna9
ChrX	stalkie_big_nohaplotig	CDS	75812845	75812873	.	+	0	Parent=comp156591_c0_seq1.mrna9
ChrX	gffcl	locus	75890975	75892557	.	+	.	ID=RLOC_00004277;geneIDs=comp155909_c0_seq1.path1;transcripts=comp155909_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	75890975	75892557	.	+	.	ID=comp155909_c0_seq1.mrna1;geneID=comp155909_c0_seq1.path1;Name=comp155909_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=1525;mismatches=3;indels=5;unknowns=0;Target=comp155909_c0_seq1 275 634 +;locus=RLOC_00004277
ChrX	stalkie_big_nohaplotig	exon	75890975	75892406	99	+	.	Parent=comp155909_c0_seq1.mrna1;Target=comp155909_c0_seq1 1 1437 +
ChrX	stalkie_big_nohaplotig	exon	75892462	75892557	100	+	.	Parent=comp155909_c0_seq1.mrna1;Target=comp155909_c0_seq1 1438 1533 +
ChrX	stalkie_big_nohaplotig	CDS	75891248	75891603	.	+	0	Parent=comp155909_c0_seq1.mrna1
ChrX	gffcl	locus	76012282	76012963	.	-	.	ID=RLOC_00004278;geneIDs=FBgn0032431.1.path1;transcripts=FBgn0032431.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76012282	76012963	.	-	.	ID=FBgn0032431.1.mrna1;geneID=FBgn0032431.1.path1;Name=FBgn0032431.1;Dir=sensecoverage=100.0;identity=100.0;matches=522;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004278
ChrX	stalkie_big_nohaplotig	exon	76012282	76012403	100	-	.	Parent=FBgn0032431.1.mrna1;Target=FBgn0032431.1 401 522 +
ChrX	stalkie_big_nohaplotig	exon	76012564	76012963	100	-	.	Parent=FBgn0032431.1.mrna1;Target=FBgn0032431.1 1 400 +
ChrX	stalkie_big_nohaplotig	CDS	76012282	76012403	.	-	2	Parent=FBgn0032431.1.mrna1;Target=FBgn0032431.1 401 522 +
ChrX	stalkie_big_nohaplotig	CDS	76012564	76012963	.	-	0	Parent=FBgn0032431.1.mrna1;Target=FBgn0032431.1 1 400 +
ChrX	gffcl	locus	76029068	76036967	.	-	.	ID=RLOC_00004279;geneIDs=ORF27.path1,comp161888_c0_seq1.path1;transcripts=comp161888_c0_seq1.mrna1,ORF27.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76029068	76036967	.	-	.	ID=comp161888_c0_seq1.mrna1;geneID=comp161888_c0_seq1.path1;Name=comp161888_c0_seq1;Dir=antisensecoverage=99.6;identity=100.0;matches=4076;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004279
ChrX	stalkie_big_nohaplotig	exon	76029068	76032503	100	-	.	Parent=comp161888_c0_seq1.mrna1;Target=comp161888_c0_seq1 1 3436 -
ChrX	stalkie_big_nohaplotig	exon	76032575	76032826	100	-	.	Parent=comp161888_c0_seq1.mrna1;Target=comp161888_c0_seq1 3437 3688 -
ChrX	stalkie_big_nohaplotig	exon	76032981	76033158	100	-	.	Parent=comp161888_c0_seq1.mrna1;Target=comp161888_c0_seq1 3689 3866 -
ChrX	stalkie_big_nohaplotig	exon	76036758	76036967	100	-	.	Parent=comp161888_c0_seq1.mrna1;Target=comp161888_c0_seq1 3867 4076 -
ChrX	stalkie_big_nohaplotig	CDS	76029100	76032503	.	-	2	Parent=comp161888_c0_seq1.mrna1;Target=comp161888_c0_seq1 33 3436 .
ChrX	stalkie_big_nohaplotig	CDS	76032575	76032826	.	-	2	Parent=comp161888_c0_seq1.mrna1;Target=comp161888_c0_seq1 3437 3688 .
ChrX	stalkie_big_nohaplotig	CDS	76032981	76033158	.	-	0	Parent=comp161888_c0_seq1.mrna1;Target=comp161888_c0_seq1 3689 3866 .
ChrX	stalkie_big_nohaplotig	CDS	76036758	76036763	.	-	0	Parent=comp161888_c0_seq1.mrna1;Target=comp161888_c0_seq1 3867 3872 .
ChrX	stalkie_big_nohaplotig	mRNA	76029103	76033522	.	-	.	ID=ORF27.mrna1;geneID=ORF27.path1;Name=ORF27;Dir=sensecoverage=100.0;identity=100.0;matches=3893;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004279
ChrX	stalkie_big_nohaplotig	exon	76029103	76032503	100	-	.	Parent=ORF27.mrna1;Target=ORF27 494 3894 +
ChrX	stalkie_big_nohaplotig	exon	76032575	76032826	100	-	.	Parent=ORF27.mrna1;Target=ORF27 242 493 +
ChrX	stalkie_big_nohaplotig	exon	76032981	76033158	100	-	.	Parent=ORF27.mrna1;Target=ORF27 64 241 +
ChrX	stalkie_big_nohaplotig	exon	76033460	76033522	98	-	.	Parent=ORF27.mrna1;Target=ORF27 1 63 +
ChrX	stalkie_big_nohaplotig	CDS	76029103	76032503	.	-	2	Parent=ORF27.mrna1;Target=ORF27 494 3894 +
ChrX	stalkie_big_nohaplotig	CDS	76032575	76032826	.	-	2	Parent=ORF27.mrna1;Target=ORF27 242 493 +
ChrX	stalkie_big_nohaplotig	CDS	76032981	76033158	.	-	0	Parent=ORF27.mrna1;Target=ORF27 64 241 +
ChrX	stalkie_big_nohaplotig	CDS	76033460	76033522	.	-	0	Parent=ORF27.mrna1;Target=ORF27 1 63 +
ChrX	gffcl	locus	76058861	76059405	.	-	.	ID=RLOC_00004280;geneIDs=comp145943_c0_seq1.path1;transcripts=comp145943_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76058861	76059405	.	-	.	ID=comp145943_c0_seq1.mrna1;geneID=comp145943_c0_seq1.path1;Name=comp145943_c0_seq1;Dir=sensecoverage=99.8;identity=99.8;matches=480;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004280
ChrX	stalkie_big_nohaplotig	exon	76058861	76059179	99	-	.	Parent=comp145943_c0_seq1.mrna1;Target=comp145943_c0_seq1 163 481 +
ChrX	stalkie_big_nohaplotig	exon	76059244	76059405	100	-	.	Parent=comp145943_c0_seq1.mrna1;Target=comp145943_c0_seq1 1 162 +
ChrX	stalkie_big_nohaplotig	CDS	76059079	76059179	.	-	2	Parent=comp145943_c0_seq1.mrna1;Target=comp145943_c0_seq1 163 263 +
ChrX	stalkie_big_nohaplotig	CDS	76059244	76059268	.	-	0	Parent=comp145943_c0_seq1.mrna1;Target=comp145943_c0_seq1 138 162 +
ChrX	gffcl	locus	76068081	76084374	.	-	.	ID=RLOC_00004281;geneIDs=comp148682_c0_seq1.path1;transcripts=comp148682_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76068081	76084374	.	-	.	ID=comp148682_c0_seq1.mrna1;geneID=comp148682_c0_seq1.path1;Name=comp148682_c0_seq1;Dir=sensecoverage=97.8;identity=99.3;matches=579;mismatches=4;indels=0;unknowns=0;locus=RLOC_00004281
ChrX	stalkie_big_nohaplotig	exon	76068081	76068277	98	-	.	Parent=comp148682_c0_seq1.mrna1;Target=comp148682_c0_seq1 399 595 +
ChrX	stalkie_big_nohaplotig	exon	76068337	76068456	100	-	.	Parent=comp148682_c0_seq1.mrna1;Target=comp148682_c0_seq1 279 398 +
ChrX	stalkie_big_nohaplotig	exon	76068515	76068659	98	-	.	Parent=comp148682_c0_seq1.mrna1;Target=comp148682_c0_seq1 134 278 +
ChrX	stalkie_big_nohaplotig	exon	76084254	76084374	100	-	.	Parent=comp148682_c0_seq1.mrna1;Target=comp148682_c0_seq1 13 133 +
ChrX	stalkie_big_nohaplotig	CDS	76068155	76068277	.	-	0	Parent=comp148682_c0_seq1.mrna1;Target=comp148682_c0_seq1 399 521 +
ChrX	stalkie_big_nohaplotig	CDS	76068337	76068456	.	-	0	Parent=comp148682_c0_seq1.mrna1;Target=comp148682_c0_seq1 279 398 +
ChrX	stalkie_big_nohaplotig	CDS	76068515	76068598	.	-	0	Parent=comp148682_c0_seq1.mrna1;Target=comp148682_c0_seq1 195 278 +
ChrX	gffcl	locus	76134008	76135297	.	+	.	ID=RLOC_00004282;geneIDs=comp156348_c2_seq1.path1;transcripts=comp156348_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76134008	76135297	.	+	.	ID=comp156348_c2_seq1.mrna1;geneID=comp156348_c2_seq1.path1;Name=comp156348_c2_seq1;Dir=sensecoverage=99.8;identity=100.0;matches=1231;mismatches=0;indels=0;unknowns=0;Target=comp156348_c2_seq1 511 657 +;locus=RLOC_00004282
ChrX	stalkie_big_nohaplotig	exon	76134008	76134304	100	+	.	Parent=comp156348_c2_seq1.mrna1;Target=comp156348_c2_seq1 4 300 +
ChrX	stalkie_big_nohaplotig	exon	76134364	76135297	100	+	.	Parent=comp156348_c2_seq1.mrna1;Target=comp156348_c2_seq1 301 1234 +
ChrX	stalkie_big_nohaplotig	CDS	76134574	76134720	.	+	0	Parent=comp156348_c2_seq1.mrna1
ChrX	gffcl	locus	76163010	76164344	.	+	.	ID=RLOC_00004283;geneIDs=comp155370_c0_seq1.path1;transcripts=comp155370_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76163010	76164344	.	+	.	ID=comp155370_c0_seq1.mrna1;geneID=comp155370_c0_seq1.path1;Name=comp155370_c0_seq1;Dir=sensecoverage=98.3;identity=99.6;matches=1245;mismatches=5;indels=0;unknowns=0;locus=RLOC_00004283
ChrX	stalkie_big_nohaplotig	exon	76163010	76163821	99	+	.	Parent=comp155370_c0_seq1.mrna1;Target=comp155370_c0_seq1 1 812 +
ChrX	stalkie_big_nohaplotig	exon	76163907	76164344	99	+	.	Parent=comp155370_c0_seq1.mrna1;Target=comp155370_c0_seq1 813 1250 +
ChrX	stalkie_big_nohaplotig	CDS	76163666	76163821	.	+	0	Parent=comp155370_c0_seq1.mrna1;Target=comp155370_c0_seq1 657 812 +
ChrX	stalkie_big_nohaplotig	CDS	76163907	76164221	.	+	0	Parent=comp155370_c0_seq1.mrna1;Target=comp155370_c0_seq1 813 1127 +
ChrX	gffcl	locus	76288122	76292885	.	-	.	ID=RLOC_00004284;geneIDs=comp147078_c0_seq1.path1;transcripts=comp147078_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76288122	76292885	.	-	.	ID=comp147078_c0_seq1.mrna1;geneID=comp147078_c0_seq1.path1;Name=comp147078_c0_seq1;Dir=sensecoverage=97.7;identity=99.6;matches=678;mismatches=3;indels=0;unknowns=0;locus=RLOC_00004284
ChrX	stalkie_big_nohaplotig	exon	76288122	76288372	99	-	.	Parent=comp147078_c0_seq1.mrna1;Target=comp147078_c0_seq1 446 696 +
ChrX	stalkie_big_nohaplotig	exon	76288456	76288551	100	-	.	Parent=comp147078_c0_seq1.mrna1;Target=comp147078_c0_seq1 350 445 +
ChrX	stalkie_big_nohaplotig	exon	76289856	76290044	100	-	.	Parent=comp147078_c0_seq1.mrna1;Target=comp147078_c0_seq1 161 349 +
ChrX	stalkie_big_nohaplotig	exon	76292741	76292885	99	-	.	Parent=comp147078_c0_seq1.mrna1;Target=comp147078_c0_seq1 16 160 +
ChrX	stalkie_big_nohaplotig	CDS	76288254	76288372	.	-	2	Parent=comp147078_c0_seq1.mrna1;Target=comp147078_c0_seq1 446 564 +
ChrX	stalkie_big_nohaplotig	CDS	76288456	76288551	.	-	2	Parent=comp147078_c0_seq1.mrna1;Target=comp147078_c0_seq1 350 445 +
ChrX	stalkie_big_nohaplotig	CDS	76289856	76290044	.	-	2	Parent=comp147078_c0_seq1.mrna1;Target=comp147078_c0_seq1 161 349 +
ChrX	stalkie_big_nohaplotig	CDS	76292741	76292783	.	-	0	Parent=comp147078_c0_seq1.mrna1;Target=comp147078_c0_seq1 118 160 +
ChrX	gffcl	locus	76328101	76382377	.	+	.	ID=RLOC_00004285;geneIDs=FBgn0016930.1.path1;transcripts=FBgn0016930.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76328101	76382377	.	+	.	ID=FBgn0016930.1.mrna1;geneID=FBgn0016930.1.path1;Name=FBgn0016930.1;Dir=sensecoverage=100.0;identity=100.0;matches=2340;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004285
ChrX	stalkie_big_nohaplotig	exon	76328101	76328250	100	+	.	Parent=FBgn0016930.1.mrna1;Target=FBgn0016930.1 1 150 +
ChrX	stalkie_big_nohaplotig	exon	76328814	76329180	100	+	.	Parent=FBgn0016930.1.mrna1;Target=FBgn0016930.1 151 517 +
ChrX	stalkie_big_nohaplotig	exon	76332701	76332864	100	+	.	Parent=FBgn0016930.1.mrna1;Target=FBgn0016930.1 518 681 +
ChrX	stalkie_big_nohaplotig	exon	76332917	76333194	100	+	.	Parent=FBgn0016930.1.mrna1;Target=FBgn0016930.1 682 959 +
ChrX	stalkie_big_nohaplotig	exon	76366946	76367084	100	+	.	Parent=FBgn0016930.1.mrna1;Target=FBgn0016930.1 960 1098 +
ChrX	stalkie_big_nohaplotig	exon	76367142	76367313	100	+	.	Parent=FBgn0016930.1.mrna1;Target=FBgn0016930.1 1099 1270 +
ChrX	stalkie_big_nohaplotig	exon	76381308	76382377	100	+	.	Parent=FBgn0016930.1.mrna1;Target=FBgn0016930.1 1271 2340 +
ChrX	stalkie_big_nohaplotig	CDS	76328101	76328250	.	+	0	Parent=FBgn0016930.1.mrna1;Target=FBgn0016930.1 1 150 +
ChrX	stalkie_big_nohaplotig	CDS	76328814	76329180	.	+	0	Parent=FBgn0016930.1.mrna1;Target=FBgn0016930.1 151 517 +
ChrX	stalkie_big_nohaplotig	CDS	76332701	76332864	.	+	2	Parent=FBgn0016930.1.mrna1;Target=FBgn0016930.1 518 681 +
ChrX	stalkie_big_nohaplotig	CDS	76332917	76333194	.	+	0	Parent=FBgn0016930.1.mrna1;Target=FBgn0016930.1 682 959 +
ChrX	stalkie_big_nohaplotig	CDS	76366946	76367084	.	+	1	Parent=FBgn0016930.1.mrna1;Target=FBgn0016930.1 960 1098 +
ChrX	stalkie_big_nohaplotig	CDS	76367142	76367313	.	+	0	Parent=FBgn0016930.1.mrna1;Target=FBgn0016930.1 1099 1270 +
ChrX	stalkie_big_nohaplotig	CDS	76381308	76382377	.	+	2	Parent=FBgn0016930.1.mrna1;Target=FBgn0016930.1 1271 2340 +
ChrX	gffcl	locus	76384151	76384669	.	+	.	ID=RLOC_00004286;geneIDs=comp135479_c0_seq1.path1;transcripts=comp135479_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76384151	76384669	.	+	.	ID=comp135479_c0_seq1.mrna1;geneID=comp135479_c0_seq1.path1;Name=comp135479_c0_seq1;Dir=indeterminatecoverage=96.8;identity=100.0;matches=519;mismatches=0;indels=0;unknowns=0;Target=comp135479_c0_seq1 521 3 .;CDS_Target=comp135479_c0_seq1 520 395 .;locus=RLOC_00004286
ChrX	stalkie_big_nohaplotig	exon	76384151	76384669	100	+	.	Parent=comp135479_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	76384543	76384668	.	+	0	Parent=comp135479_c0_seq1.mrna1
ChrX	gffcl	locus	76392104	76393256	.	+	.	ID=RLOC_00004287;geneIDs=comp142915_c1_seq1.path1;transcripts=comp142915_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76392104	76393256	.	+	.	ID=comp142915_c1_seq1.mrna1;geneID=comp142915_c1_seq1.path1;Name=comp142915_c1_seq1;Dir=sensecoverage=100.0;identity=98.8;matches=1028;mismatches=7;indels=5;unknowns=0;Target=comp142915_c1_seq1 913 1038 +;locus=RLOC_00004287
ChrX	stalkie_big_nohaplotig	exon	76392104	76392230	98	+	.	Parent=comp142915_c1_seq1.mrna1;Target=comp142915_c1_seq1 1 127 +
ChrX	stalkie_big_nohaplotig	exon	76392349	76393256	98	+	.	Parent=comp142915_c1_seq1.mrna1;Target=comp142915_c1_seq1 128 1040 +
ChrX	stalkie_big_nohaplotig	CDS	76393129	76393254	.	+	0	Parent=comp142915_c1_seq1.mrna1
ChrX	gffcl	locus	76426389	76514822	.	+	.	ID=RLOC_00004289;geneIDs=comp135093_c0_seq1.path1;transcripts=comp135093_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76426389	76514822	.	+	.	ID=comp135093_c0_seq1.mrna1;geneID=comp135093_c0_seq1.path1;Name=comp135093_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=597;mismatches=2;indels=0;unknowns=0;locus=RLOC_00004289
ChrX	stalkie_big_nohaplotig	exon	76426389	76426546	98	+	.	Parent=comp135093_c0_seq1.mrna1;Target=comp135093_c0_seq1 1 158 +
ChrX	stalkie_big_nohaplotig	exon	76514382	76514822	100	+	.	Parent=comp135093_c0_seq1.mrna1;Target=comp135093_c0_seq1 159 599 +
ChrX	stalkie_big_nohaplotig	CDS	76426391	76426546	.	+	0	Parent=comp135093_c0_seq1.mrna1;Target=comp135093_c0_seq1 3 158 +
ChrX	stalkie_big_nohaplotig	CDS	76514382	76514822	.	+	0	Parent=comp135093_c0_seq1.mrna1;Target=comp135093_c0_seq1 159 599 +
ChrX	gffcl	locus	76499501	76501578	.	+	.	ID=RLOC_00004290;geneIDs=comp153653_c0_seq1.path1,comp338272_c0_seq1.path1;transcripts=comp153653_c0_seq1.mrna1,comp338272_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76499501	76501578	.	+	.	ID=comp153653_c0_seq1.mrna1;geneID=comp153653_c0_seq1.path1;Name=comp153653_c0_seq1;Dir=antisensecoverage=99.6;identity=99.7;matches=1548;mismatches=3;indels=1;unknowns=0;Target=comp153653_c0_seq1 1205 1417 .;locus=RLOC_00004290
ChrX	stalkie_big_nohaplotig	exon	76499501	76499949	99	+	.	Parent=comp153653_c0_seq1.mrna1;Target=comp153653_c0_seq1 1103 1552 -
ChrX	stalkie_big_nohaplotig	exon	76500017	76500169	100	+	.	Parent=comp153653_c0_seq1.mrna1;Target=comp153653_c0_seq1 950 1102 -
ChrX	stalkie_big_nohaplotig	exon	76500514	76500692	100	+	.	Parent=comp153653_c0_seq1.mrna1;Target=comp153653_c0_seq1 771 949 -
ChrX	stalkie_big_nohaplotig	exon	76500752	76501143	100	+	.	Parent=comp153653_c0_seq1.mrna1;Target=comp153653_c0_seq1 379 770 -
ChrX	stalkie_big_nohaplotig	exon	76501201	76501578	99	+	.	Parent=comp153653_c0_seq1.mrna1;Target=comp153653_c0_seq1 1 378 -
ChrX	stalkie_big_nohaplotig	CDS	76499636	76499848	.	+	0	Parent=comp153653_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76500150	76500535	.	+	.	ID=comp338272_c0_seq1.mrna1;geneID=comp338272_c0_seq1.path1;Name=comp338272_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=386;mismatches=0;indels=0;unknowns=0;Target=comp338272_c0_seq1 386 1 .;CDS_Target=comp338272_c0_seq1 61 2 .;locus=RLOC_00004290
ChrX	stalkie_big_nohaplotig	exon	76500150	76500535	100	+	.	Parent=comp338272_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	76500151	76500210	.	+	0	Parent=comp338272_c0_seq1.mrna1
ChrX	gffcl	locus	76515826	76518546	.	+	.	ID=RLOC_00004291;geneIDs=FBgn0263038.1.path1;transcripts=FBgn0263038.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76515826	76518546	.	+	.	ID=FBgn0263038.1.mrna1;geneID=FBgn0263038.1.path1;Name=FBgn0263038.1;Dir=sensecoverage=100.0;identity=100.0;matches=2129;mismatches=0;indels=1;unknowns=0;Target=FBgn0263038.1 3 59 +;locus=RLOC_00004291
ChrX	stalkie_big_nohaplotig	exon	76515826	76517300	99	+	.	Parent=FBgn0263038.1.mrna1;Target=FBgn0263038.1 1 1476 +
ChrX	stalkie_big_nohaplotig	exon	76517392	76517529	100	+	.	Parent=FBgn0263038.1.mrna1;Target=FBgn0263038.1 1477 1614 +
ChrX	stalkie_big_nohaplotig	exon	76517965	76518172	100	+	.	Parent=FBgn0263038.1.mrna1;Target=FBgn0263038.1 1615 1822 +
ChrX	stalkie_big_nohaplotig	exon	76518239	76518546	100	+	.	Parent=FBgn0263038.1.mrna1;Target=FBgn0263038.1 1823 2130 +
ChrX	stalkie_big_nohaplotig	CDS	76515828	76515883	.	+	0	Parent=FBgn0263038.1.mrna1
ChrX	gffcl	locus	76520071	76520310	.	+	.	ID=RLOC_00004292;geneIDs=comp135723_c0_seq1.path1;transcripts=comp135723_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76520071	76520310	.	+	.	ID=comp135723_c0_seq1.mrna1;geneID=comp135723_c0_seq1.path1;Name=comp135723_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.3;matches=235;mismatches=5;indels=12;unknowns=0;Target=comp135723_c0_seq1 252 1 .;CDS_Target=comp135723_c0_seq1 63 1 .;locus=RLOC_00004292
ChrX	stalkie_big_nohaplotig	exon	76520071	76520310	93	+	.	Parent=comp135723_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	76520071	76520130	.	+	0	Parent=comp135723_c0_seq1.mrna1
ChrX	gffcl	locus	76521222	76521515	.	+	.	ID=RLOC_00004293;geneIDs=comp136012_c0_seq1.path1;transcripts=comp136012_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76521222	76521515	.	+	.	ID=comp136012_c0_seq1.mrna1;geneID=comp136012_c0_seq1.path1;Name=comp136012_c0_seq1;Dir=indeterminatecoverage=85.5;identity=100.0;matches=294;mismatches=0;indels=0;unknowns=0;Target=comp136012_c0_seq1 344 51 .;CDS_Target=comp136012_c0_seq1 262 146 .;locus=RLOC_00004293
ChrX	stalkie_big_nohaplotig	exon	76521222	76521515	100	+	.	Parent=comp136012_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	76521317	76521433	.	+	0	Parent=comp136012_c0_seq1.mrna1
ChrX	gffcl	locus	76522110	76522781	.	+	.	ID=RLOC_00004294;geneIDs=comp147060_c0_seq1.path1;transcripts=comp147060_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76522110	76522781	.	+	.	ID=comp147060_c0_seq1.mrna1;geneID=comp147060_c0_seq1.path1;Name=comp147060_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=672;mismatches=0;indels=0;unknowns=0;Target=comp147060_c0_seq1 672 1 .;CDS_Target=comp147060_c0_seq1 461 345 .;locus=RLOC_00004294
ChrX	stalkie_big_nohaplotig	exon	76522110	76522781	100	+	.	Parent=comp147060_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	76522454	76522570	.	+	0	Parent=comp147060_c0_seq1.mrna1
ChrX	gffcl	locus	76522894	76523575	.	-	.	ID=RLOC_00004295;geneIDs=comp150176_c0_seq1.path1;transcripts=comp150176_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76522894	76523575	.	-	.	ID=comp150176_c0_seq1.mrna1;geneID=comp150176_c0_seq1.path1;Name=comp150176_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=682;mismatches=0;indels=0;unknowns=0;Target=comp150176_c0_seq1 682 1 .;CDS_Target=comp150176_c0_seq1 531 418 .;locus=RLOC_00004295
ChrX	stalkie_big_nohaplotig	exon	76522894	76523575	100	-	.	Parent=comp150176_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	76523045	76523158	.	-	0	Parent=comp150176_c0_seq1.mrna1
ChrX	gffcl	locus	76524526	76542680	.	-	.	ID=RLOC_00004296;geneIDs=FBgn0086451.1.path1;transcripts=FBgn0086451.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76524526	76542680	.	-	.	ID=FBgn0086451.1.mrna1;geneID=FBgn0086451.1.path1;Name=FBgn0086451.1;Dir=sensecoverage=100.0;identity=100.0;matches=6369;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004296
ChrX	stalkie_big_nohaplotig	exon	76524526	76525685	100	-	.	Parent=FBgn0086451.1.mrna1;Target=FBgn0086451.1 5210 6369 +
ChrX	stalkie_big_nohaplotig	exon	76528257	76532066	100	-	.	Parent=FBgn0086451.1.mrna1;Target=FBgn0086451.1 1400 5209 +
ChrX	stalkie_big_nohaplotig	exon	76541213	76541445	100	-	.	Parent=FBgn0086451.1.mrna1;Target=FBgn0086451.1 1167 1399 +
ChrX	stalkie_big_nohaplotig	exon	76541515	76542680	100	-	.	Parent=FBgn0086451.1.mrna1;Target=FBgn0086451.1 1 1166 +
ChrX	stalkie_big_nohaplotig	CDS	76524526	76525685	.	-	2	Parent=FBgn0086451.1.mrna1;Target=FBgn0086451.1 5210 6369 +
ChrX	stalkie_big_nohaplotig	CDS	76528257	76532066	.	-	2	Parent=FBgn0086451.1.mrna1;Target=FBgn0086451.1 1400 5209 +
ChrX	stalkie_big_nohaplotig	CDS	76541213	76541445	.	-	1	Parent=FBgn0086451.1.mrna1;Target=FBgn0086451.1 1167 1399 +
ChrX	stalkie_big_nohaplotig	CDS	76541515	76542680	.	-	0	Parent=FBgn0086451.1.mrna1;Target=FBgn0086451.1 1 1166 +
ChrX	gffcl	locus	76535030	76535955	.	+	.	ID=RLOC_00004297;geneIDs=FBgn0034215.1.path1;transcripts=FBgn0034215.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76535030	76535955	.	+	.	ID=FBgn0034215.1.mrna1;geneID=FBgn0034215.1.path1;Name=FBgn0034215.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=926;mismatches=0;indels=1;unknowns=0;Target=FBgn0034215.1 927 1 .;CDS_Target=FBgn0034215.1 927 40 .;locus=RLOC_00004297
ChrX	stalkie_big_nohaplotig	exon	76535030	76535955	99	+	.	Parent=FBgn0034215.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	76535068	76535955	.	+	0	Parent=FBgn0034215.1.mrna1
ChrX	gffcl	locus	76652393	77967147	.	+	.	ID=RLOC_00004299;geneIDs=comp147589_c0_seq1.path5;transcripts=comp147589_c0_seq1.mrna5
ChrX	stalkie_big_nohaplotig	mRNA	76652393	77967147	.	+	.	ID=comp147589_c0_seq1.mrna5;geneID=comp147589_c0_seq1.path5;Name=comp147589_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=1068;mismatches=28;indels=8;unknowns=0;Target=comp147589_c0_seq1 874 2 .;locus=RLOC_00004299
ChrX	stalkie_big_nohaplotig	exon	76652393	76653379	99	+	.	Parent=comp147589_c0_seq1.mrna5;Target=comp147589_c0_seq1 987 1 .
ChrX	stalkie_big_nohaplotig	exon	76659236	76659245	100	+	.	Parent=comp147589_c0_seq1.mrna5;Target=comp147589_c0_seq1 997 988 .
ChrX	stalkie_big_nohaplotig	exon	76662973	76662975	100	+	.	Parent=comp147589_c0_seq1.mrna5;Target=comp147589_c0_seq1 1013 1011 .
ChrX	stalkie_big_nohaplotig	exon	76669602	76669614	100	+	.	Parent=comp147589_c0_seq1.mrna5;Target=comp147589_c0_seq1 1026 1014 .
ChrX	stalkie_big_nohaplotig	exon	77961346	77961396	47	+	.	Parent=comp147589_c0_seq1.mrna5;Target=comp147589_c0_seq1 1094 1048 .
ChrX	stalkie_big_nohaplotig	exon	77962598	77962609	100	+	.	Parent=comp147589_c0_seq1.mrna5;Target=comp147589_c0_seq1 1106 1095 .
ChrX	stalkie_big_nohaplotig	exon	77967122	77967147	96	+	.	Parent=comp147589_c0_seq1.mrna5;Target=comp147589_c0_seq1 1132 1107 .
ChrX	stalkie_big_nohaplotig	CDS	76652394	76653266	.	+	0	Parent=comp147589_c0_seq1.mrna5
ChrX	gffcl	locus	76660430	76719211	.	-	.	ID=RLOC_00004300;geneIDs=FBgn0051632.1.path1;transcripts=FBgn0051632.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76660430	76719211	.	-	.	ID=FBgn0051632.1.mrna1;geneID=FBgn0051632.1.path1;Name=FBgn0051632.1;Dir=sensecoverage=100.0;identity=100.0;matches=1671;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004300
ChrX	stalkie_big_nohaplotig	exon	76660430	76660821	100	-	.	Parent=FBgn0051632.1.mrna1;Target=FBgn0051632.1 1280 1671 +
ChrX	stalkie_big_nohaplotig	exon	76677946	76678127	100	-	.	Parent=FBgn0051632.1.mrna1;Target=FBgn0051632.1 1098 1279 +
ChrX	stalkie_big_nohaplotig	exon	76680945	76681280	100	-	.	Parent=FBgn0051632.1.mrna1;Target=FBgn0051632.1 762 1097 +
ChrX	stalkie_big_nohaplotig	exon	76681499	76682153	100	-	.	Parent=FBgn0051632.1.mrna1;Target=FBgn0051632.1 107 761 +
ChrX	stalkie_big_nohaplotig	exon	76719106	76719211	100	-	.	Parent=FBgn0051632.1.mrna1;Target=FBgn0051632.1 1 106 +
ChrX	stalkie_big_nohaplotig	CDS	76660430	76660821	.	-	2	Parent=FBgn0051632.1.mrna1;Target=FBgn0051632.1 1280 1671 +
ChrX	stalkie_big_nohaplotig	CDS	76677946	76678127	.	-	1	Parent=FBgn0051632.1.mrna1;Target=FBgn0051632.1 1098 1279 +
ChrX	stalkie_big_nohaplotig	CDS	76680945	76681280	.	-	1	Parent=FBgn0051632.1.mrna1;Target=FBgn0051632.1 762 1097 +
ChrX	stalkie_big_nohaplotig	CDS	76681499	76682153	.	-	2	Parent=FBgn0051632.1.mrna1;Target=FBgn0051632.1 107 761 +
ChrX	stalkie_big_nohaplotig	CDS	76719106	76719211	.	-	0	Parent=FBgn0051632.1.mrna1;Target=FBgn0051632.1 1 106 +
ChrX	gffcl	locus	76805551	76806538	.	+	.	ID=RLOC_00004301;geneIDs=comp394666_c0_seq1.path1;transcripts=comp394666_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76805551	76806538	.	+	.	ID=comp394666_c0_seq1.mrna1;geneID=comp394666_c0_seq1.path1;Name=comp394666_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=925;mismatches=0;indels=0;unknowns=0;Target=comp394666_c0_seq1 684 821 +;locus=RLOC_00004301
ChrX	stalkie_big_nohaplotig	exon	76805551	76805985	100	+	.	Parent=comp394666_c0_seq1.mrna1;Target=comp394666_c0_seq1 1 435 +
ChrX	stalkie_big_nohaplotig	exon	76806049	76806538	100	+	.	Parent=comp394666_c0_seq1.mrna1;Target=comp394666_c0_seq1 436 925 +
ChrX	stalkie_big_nohaplotig	CDS	76806297	76806434	.	+	0	Parent=comp394666_c0_seq1.mrna1
ChrX	gffcl	locus	76831855	76832044	.	+	.	ID=RLOC_00004302;geneIDs=comp48714_c0_seq1.path1;transcripts=comp48714_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76831855	76832044	.	+	.	ID=comp48714_c0_seq1.mrna1;geneID=comp48714_c0_seq1.path1;Name=comp48714_c0_seq1;Dir=indeterminatecoverage=91.8;identity=100.0;matches=190;mismatches=0;indels=0;unknowns=0;Target=comp48714_c0_seq1 207 18 .;CDS_Target=comp48714_c0_seq1 92 18 .;locus=RLOC_00004302
ChrX	stalkie_big_nohaplotig	exon	76831855	76832044	100	+	.	Parent=comp48714_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	76831855	76831929	.	+	0	Parent=comp48714_c0_seq1.mrna1
ChrX	gffcl	locus	76838401	76854336	.	-	.	ID=RLOC_00004303;geneIDs=comp162145_c1_seq1.path1;transcripts=comp162145_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76838401	76854336	.	-	.	ID=comp162145_c1_seq1.mrna1;geneID=comp162145_c1_seq1.path1;Name=comp162145_c1_seq1;Dir=antisensecoverage=98.2;identity=97.7;matches=1418;mismatches=11;indels=23;unknowns=0;locus=RLOC_00004303
ChrX	stalkie_big_nohaplotig	exon	76838401	76838874	97	-	.	Parent=comp162145_c1_seq1.mrna1;Target=comp162145_c1_seq1 16 494 -
ChrX	stalkie_big_nohaplotig	exon	76845854	76846297	99	-	.	Parent=comp162145_c1_seq1.mrna1;Target=comp162145_c1_seq1 495 938 -
ChrX	stalkie_big_nohaplotig	exon	76853518	76853766	93	-	.	Parent=comp162145_c1_seq1.mrna1;Target=comp162145_c1_seq1 939 1193 -
ChrX	stalkie_big_nohaplotig	exon	76853826	76853853	100	-	.	Parent=comp162145_c1_seq1.mrna1;Target=comp162145_c1_seq1 1194 1221 -
ChrX	stalkie_big_nohaplotig	exon	76853999	76854040	100	-	.	Parent=comp162145_c1_seq1.mrna1;Target=comp162145_c1_seq1 1222 1263 -
ChrX	stalkie_big_nohaplotig	exon	76854139	76854336	99	-	.	Parent=comp162145_c1_seq1.mrna1;Target=comp162145_c1_seq1 1264 1461 -
ChrX	stalkie_big_nohaplotig	CDS	76853704	76853766	.	-	0	Parent=comp162145_c1_seq1.mrna1;Target=comp162145_c1_seq1 1131 1193 .
ChrX	stalkie_big_nohaplotig	CDS	76853826	76853853	.	-	1	Parent=comp162145_c1_seq1.mrna1;Target=comp162145_c1_seq1 1194 1221 .
ChrX	stalkie_big_nohaplotig	CDS	76853999	76854040	.	-	1	Parent=comp162145_c1_seq1.mrna1;Target=comp162145_c1_seq1 1222 1263 .
ChrX	stalkie_big_nohaplotig	CDS	76854139	76854197	.	-	0	Parent=comp162145_c1_seq1.mrna1;Target=comp162145_c1_seq1 1264 1322 .
ChrX	gffcl	locus	76874484	76876393	.	-	.	ID=RLOC_00004304;geneIDs=FBgn0035900.2.path2;transcripts=FBgn0035900.2.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	76874484	76876393	.	-	.	ID=FBgn0035900.2.mrna2;geneID=FBgn0035900.2.path2;Name=FBgn0035900.2;Dir=sensecoverage=100.0;identity=99.0;matches=1675;mismatches=17;indels=0;unknowns=0;locus=RLOC_00004304
ChrX	stalkie_big_nohaplotig	exon	76874484	76874846	99	-	.	Parent=FBgn0035900.2.mrna2;Target=FBgn0035900.2 1330 1692 +
ChrX	stalkie_big_nohaplotig	exon	76874930	76875125	100	-	.	Parent=FBgn0035900.2.mrna2;Target=FBgn0035900.2 1134 1329 +
ChrX	stalkie_big_nohaplotig	exon	76875196	76875657	98	-	.	Parent=FBgn0035900.2.mrna2;Target=FBgn0035900.2 672 1133 +
ChrX	stalkie_big_nohaplotig	exon	76875723	76876393	98	-	.	Parent=FBgn0035900.2.mrna2;Target=FBgn0035900.2 1 671 +
ChrX	stalkie_big_nohaplotig	CDS	76874484	76874846	.	-	0	Parent=FBgn0035900.2.mrna2;Target=FBgn0035900.2 1330 1692 +
ChrX	stalkie_big_nohaplotig	CDS	76874930	76875125	.	-	1	Parent=FBgn0035900.2.mrna2;Target=FBgn0035900.2 1134 1329 +
ChrX	stalkie_big_nohaplotig	CDS	76875196	76875657	.	-	1	Parent=FBgn0035900.2.mrna2;Target=FBgn0035900.2 672 1133 +
ChrX	stalkie_big_nohaplotig	CDS	76875723	76876393	.	-	0	Parent=FBgn0035900.2.mrna2;Target=FBgn0035900.2 1 671 +
ChrX	gffcl	locus	76917377	76923422	.	+	.	ID=RLOC_00004306;geneIDs=comp153045_c0_seq1.path1;transcripts=comp153045_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76917377	76923422	.	+	.	ID=comp153045_c0_seq1.mrna1;geneID=comp153045_c0_seq1.path1;Name=comp153045_c0_seq1;Dir=sensecoverage=64.6;identity=100.0;matches=590;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004306
ChrX	stalkie_big_nohaplotig	exon	76917377	76917383	100	+	.	Parent=comp153045_c0_seq1.mrna1;Target=comp153045_c0_seq1 322 328 +
ChrX	stalkie_big_nohaplotig	exon	76917973	76917975	100	+	.	Parent=comp153045_c0_seq1.mrna1;Target=comp153045_c0_seq1 329 331 +
ChrX	stalkie_big_nohaplotig	exon	76922758	76922957	100	+	.	Parent=comp153045_c0_seq1.mrna1;Target=comp153045_c0_seq1 332 531 +
ChrX	stalkie_big_nohaplotig	exon	76923043	76923422	100	+	.	Parent=comp153045_c0_seq1.mrna1;Target=comp153045_c0_seq1 532 911 +
ChrX	stalkie_big_nohaplotig	CDS	76922813	76922957	.	+	0	Parent=comp153045_c0_seq1.mrna1;Target=comp153045_c0_seq1 387 531 +
ChrX	stalkie_big_nohaplotig	CDS	76923043	76923260	.	+	2	Parent=comp153045_c0_seq1.mrna1;Target=comp153045_c0_seq1 532 749 +
ChrX	gffcl	locus	76926956	76927948	.	+	.	ID=RLOC_00004307;geneIDs=ORF1797.path1;transcripts=ORF1797.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76926956	76927948	.	+	.	ID=ORF1797.mrna1;geneID=ORF1797.path1;Name=ORF1797;Dir=indeterminatecoverage=100.0;identity=100.0;matches=993;mismatches=0;indels=0;unknowns=0;Target=ORF1797 993 1 .;locus=RLOC_00004307
ChrX	stalkie_big_nohaplotig	exon	76926956	76927948	100	+	.	Parent=ORF1797.mrna1
ChrX	stalkie_big_nohaplotig	CDS	76926956	76927948	.	+	0	Parent=ORF1797.mrna1
ChrX	gffcl	locus	76933339	76940265	.	+	.	ID=RLOC_00004308;geneIDs=comp149955_c0_seq1.path1;transcripts=comp149955_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76933339	76940265	.	+	.	ID=comp149955_c0_seq1.mrna1;geneID=comp149955_c0_seq1.path1;Name=comp149955_c0_seq1;Dir=antisensecoverage=99.8;identity=100.0;matches=834;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004308
ChrX	stalkie_big_nohaplotig	exon	76933339	76933798	100	+	.	Parent=comp149955_c0_seq1.mrna1;Target=comp149955_c0_seq1 377 836 -
ChrX	stalkie_big_nohaplotig	exon	76933868	76933941	100	+	.	Parent=comp149955_c0_seq1.mrna1;Target=comp149955_c0_seq1 303 376 -
ChrX	stalkie_big_nohaplotig	exon	76939966	76940265	100	+	.	Parent=comp149955_c0_seq1.mrna1;Target=comp149955_c0_seq1 3 302 -
ChrX	stalkie_big_nohaplotig	CDS	76933473	76933798	.	+	0	Parent=comp149955_c0_seq1.mrna1;Target=comp149955_c0_seq1 377 702 .
ChrX	stalkie_big_nohaplotig	CDS	76933868	76933941	.	+	1	Parent=comp149955_c0_seq1.mrna1;Target=comp149955_c0_seq1 303 376 .
ChrX	stalkie_big_nohaplotig	CDS	76939966	76939979	.	+	2	Parent=comp149955_c0_seq1.mrna1;Target=comp149955_c0_seq1 289 302 .
ChrX	gffcl	locus	76945392	76946228	.	+	.	ID=RLOC_00004309;geneIDs=ORF2578.path1;transcripts=ORF2578.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76945392	76946228	.	+	.	ID=ORF2578.mrna1;geneID=ORF2578.path1;Name=ORF2578;Dir=indeterminatecoverage=100.0;identity=100.0;matches=837;mismatches=0;indels=0;unknowns=0;Target=ORF2578 837 1 .;locus=RLOC_00004309
ChrX	stalkie_big_nohaplotig	exon	76945392	76946228	100	+	.	Parent=ORF2578.mrna1
ChrX	stalkie_big_nohaplotig	CDS	76945392	76946228	.	+	0	Parent=ORF2578.mrna1
ChrX	gffcl	locus	76967412	76968197	.	-	.	ID=RLOC_00004310;geneIDs=comp145083_c0_seq1.path1;transcripts=comp145083_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76967412	76968197	.	-	.	ID=comp145083_c0_seq1.mrna1;geneID=comp145083_c0_seq1.path1;Name=comp145083_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=657;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004310
ChrX	stalkie_big_nohaplotig	exon	76967412	76967705	100	-	.	Parent=comp145083_c0_seq1.mrna1;Target=comp145083_c0_seq1 364 657 +
ChrX	stalkie_big_nohaplotig	exon	76967769	76967948	100	-	.	Parent=comp145083_c0_seq1.mrna1;Target=comp145083_c0_seq1 184 363 +
ChrX	stalkie_big_nohaplotig	exon	76968015	76968197	100	-	.	Parent=comp145083_c0_seq1.mrna1;Target=comp145083_c0_seq1 1 183 +
ChrX	stalkie_big_nohaplotig	CDS	76967472	76967705	.	-	0	Parent=comp145083_c0_seq1.mrna1;Target=comp145083_c0_seq1 364 597 +
ChrX	stalkie_big_nohaplotig	CDS	76967769	76967948	.	-	0	Parent=comp145083_c0_seq1.mrna1;Target=comp145083_c0_seq1 184 363 +
ChrX	stalkie_big_nohaplotig	CDS	76968015	76968065	.	-	0	Parent=comp145083_c0_seq1.mrna1;Target=comp145083_c0_seq1 133 183 +
ChrX	gffcl	locus	76973329	76975794	.	-	.	ID=RLOC_00004311;geneIDs=FBgn0001316.path1;transcripts=FBgn0001316.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	76973329	76975794	.	-	.	ID=FBgn0001316.mrna1;geneID=FBgn0001316.path1;Name=FBgn0001316;Dir=indeterminatecoverage=100.0;identity=99.7;matches=2458;mismatches=8;indels=0;unknowns=0;Target=FBgn0001316 2466 1 .;locus=RLOC_00004311
ChrX	stalkie_big_nohaplotig	exon	76973329	76975794	99	-	.	Parent=FBgn0001316.mrna1
ChrX	stalkie_big_nohaplotig	CDS	76973329	76975794	.	-	0	Parent=FBgn0001316.mrna1
ChrX	gffcl	locus	77112146	77122044	.	-	.	ID=RLOC_00004313;geneIDs=comp149553_c0_seq1.path3;transcripts=comp149553_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	77112146	77122044	.	-	.	ID=comp149553_c0_seq1.mrna3;geneID=comp149553_c0_seq1.path3;Name=comp149553_c0_seq1;Dir=indeterminatecoverage=96.7;identity=98.4;matches=428;mismatches=6;indels=1;unknowns=0;Target=comp149553_c0_seq1 384 298 .;locus=RLOC_00004313
ChrX	stalkie_big_nohaplotig	exon	77112146	77112170	80	-	.	Parent=comp149553_c0_seq1.mrna3;Target=comp149553_c0_seq1 435 410 .
ChrX	stalkie_big_nohaplotig	exon	77117797	77117801	100	-	.	Parent=comp149553_c0_seq1.mrna3;Target=comp149553_c0_seq1 409 405 .
ChrX	stalkie_big_nohaplotig	exon	77121641	77122044	99	-	.	Parent=comp149553_c0_seq1.mrna3;Target=comp149553_c0_seq1 404 1 .
ChrX	stalkie_big_nohaplotig	CDS	77121661	77121747	.	-	0	Parent=comp149553_c0_seq1.mrna3
ChrX	gffcl	locus	77122187	77123633	.	+	.	ID=RLOC_00004314;geneIDs=FBgn0039711.3.path7;transcripts=FBgn0039711.3.mrna7
ChrX	stalkie_big_nohaplotig	mRNA	77122187	77123633	.	+	.	ID=FBgn0039711.3.mrna7;geneID=FBgn0039711.3.path7;Name=FBgn0039711.3;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1443;mismatches=3;indels=1;unknowns=0;Target=FBgn0039711.3 1446 1 .;CDS_Target=FBgn0039711.3 1446 391 .;locus=RLOC_00004314
ChrX	stalkie_big_nohaplotig	exon	77122187	77123633	99	+	.	Parent=FBgn0039711.3.mrna7
ChrX	stalkie_big_nohaplotig	CDS	77122578	77123633	.	+	0	Parent=FBgn0039711.3.mrna7
ChrX	gffcl	locus	77221162	77221361	.	-	.	ID=RLOC_00004315;geneIDs=comp148496_c0_seq1.path4;transcripts=comp148496_c0_seq1.mrna4
ChrX	stalkie_big_nohaplotig	mRNA	77221162	77221361	.	-	.	ID=comp148496_c0_seq1.mrna4;geneID=comp148496_c0_seq1.path4;Name=comp148496_c0_seq1;Dir=indeterminatecoverage=91.8;identity=72.8;matches=187;mismatches=12;indels=58;unknowns=0;Target=comp148496_c0_seq1 256 1 .;CDS_Target=comp148496_c0_seq1 134 90 .;locus=RLOC_00004315
ChrX	stalkie_big_nohaplotig	exon	77221162	77221361	72	-	.	Parent=comp148496_c0_seq1.mrna4
ChrX	stalkie_big_nohaplotig	CDS	77221242	77221286	.	-	0	Parent=comp148496_c0_seq1.mrna4
ChrX	gffcl	locus	77221698	77222085	.	+	.	ID=RLOC_00004316;geneIDs=comp151410_c2_seq1.path3;transcripts=comp151410_c2_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	77221698	77222085	.	+	.	ID=comp151410_c2_seq1.mrna3;geneID=comp151410_c2_seq1.path3;Name=comp151410_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=385;mismatches=3;indels=0;unknowns=0;Target=comp151410_c2_seq1 388 1 .;CDS_Target=comp151410_c2_seq1 301 209 .;locus=RLOC_00004316
ChrX	stalkie_big_nohaplotig	exon	77221698	77222085	99	+	.	Parent=comp151410_c2_seq1.mrna3
ChrX	stalkie_big_nohaplotig	CDS	77221906	77221998	.	+	0	Parent=comp151410_c2_seq1.mrna3
ChrX	gffcl	locus	77509170	77678558	.	-	.	ID=RLOC_00004318;geneIDs=comp134767_c1_seq1.path1;transcripts=comp134767_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	77509170	77678558	.	-	.	ID=comp134767_c1_seq1.mrna1;geneID=comp134767_c1_seq1.path1;Name=comp134767_c1_seq1;Dir=indeterminatecoverage=96.0;identity=91.3;matches=1199;mismatches=73;indels=41;unknowns=0;Target=comp134767_c1_seq1 551 471 .;locus=RLOC_00004318
ChrX	stalkie_big_nohaplotig	exon	77509170	77510384	91	-	.	Parent=comp134767_c1_seq1.mrna1;Target=comp134767_c1_seq1 1338 91 .
ChrX	stalkie_big_nohaplotig	exon	77510439	77510492	94	-	.	Parent=comp134767_c1_seq1.mrna1;Target=comp134767_c1_seq1 90 37 .
ChrX	stalkie_big_nohaplotig	exon	77678552	77678558	100	-	.	Parent=comp134767_c1_seq1.mrna1;Target=comp134767_c1_seq1 36 30 .
ChrX	stalkie_big_nohaplotig	CDS	77509924	77510004	.	-	0	Parent=comp134767_c1_seq1.mrna1
ChrX	gffcl	locus	77510515	77511346	.	+	.	ID=RLOC_00004319;geneIDs=comp165290_c0_seq1.path1;transcripts=comp165290_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	77510515	77511346	.	+	.	ID=comp165290_c0_seq1.mrna1;geneID=comp165290_c0_seq1.path1;Name=comp165290_c0_seq1;Dir=indeterminatecoverage=94.1;identity=90.0;matches=773;mismatches=51;indels=35;unknowns=0;Target=comp165290_c0_seq1 872 22 .;CDS_Target=comp165290_c0_seq1 78 22 .;locus=RLOC_00004319
ChrX	stalkie_big_nohaplotig	exon	77510515	77511346	89	+	.	Parent=comp165290_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	77510515	77510571	.	+	0	Parent=comp165290_c0_seq1.mrna1
ChrX	gffcl	locus	77585495	77585532	.	-	.	ID=RLOC_00004320;geneIDs=comp137518_c0_seq1.path1;transcripts=comp137518_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	77585495	77585532	.	-	.	ID=comp137518_c0_seq1.mrna1;geneID=comp137518_c0_seq1.path1;Name=comp137518_c0_seq1;Dir=indeterminatecoverage=18.9;identity=97.4;matches=37;mismatches=1;indels=0;unknowns=0;Target=comp137518_c0_seq1 38 1 .;CDS_Target=comp137518_c0_seq1 38 2 .;locus=RLOC_00004320
ChrX	stalkie_big_nohaplotig	exon	77585495	77585532	97	-	.	Parent=comp137518_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	77585495	77585531	.	-	0	Parent=comp137518_c0_seq1.mrna1
ChrX	gffcl	locus	77613064	77614316	.	-	.	ID=RLOC_00004321;geneIDs=AAEL017378.path3;transcripts=AAEL017378.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	77613064	77614316	.	-	.	ID=AAEL017378.mrna3;geneID=AAEL017378.path3;Name=AAEL017378;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1243;mismatches=10;indels=1;unknowns=0;Target=AAEL017378 1254 1 .;locus=RLOC_00004321
ChrX	stalkie_big_nohaplotig	exon	77613064	77614316	99	-	.	Parent=AAEL017378.mrna3
ChrX	stalkie_big_nohaplotig	CDS	77613064	77614316	.	-	0	Parent=AAEL017378.mrna3
ChrX	gffcl	locus	77729247	77730092	.	+	.	ID=RLOC_00004322;geneIDs=comp116575_c0_seq1.path1;transcripts=comp116575_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	77729247	77730092	.	+	.	ID=comp116575_c0_seq1.mrna1;geneID=comp116575_c0_seq1.path1;Name=comp116575_c0_seq1;Dir=indeterminatecoverage=98.1;identity=100.0;matches=846;mismatches=0;indels=0;unknowns=0;Target=comp116575_c0_seq1 846 1 .;CDS_Target=comp116575_c0_seq1 674 312 .;locus=RLOC_00004322
ChrX	stalkie_big_nohaplotig	exon	77729247	77730092	100	+	.	Parent=comp116575_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	77729558	77729920	.	+	0	Parent=comp116575_c0_seq1.mrna1
ChrX	gffcl	locus	77842191	77843157	.	+	.	ID=RLOC_00004323;geneIDs=comp162746_c0_seq1.path7;transcripts=comp162746_c0_seq1.mrna7
ChrX	stalkie_big_nohaplotig	mRNA	77842191	77843157	.	+	.	ID=comp162746_c0_seq1.mrna7;geneID=comp162746_c0_seq1.path7;Name=comp162746_c0_seq1;Dir=indeterminatecoverage=89.0;identity=99.5;matches=962;mismatches=5;indels=0;unknowns=0;Target=comp162746_c0_seq1 1066 100 .;CDS_Target=comp162746_c0_seq1 961 521 .;locus=RLOC_00004323
ChrX	stalkie_big_nohaplotig	exon	77842191	77843157	99	+	.	Parent=comp162746_c0_seq1.mrna7
ChrX	stalkie_big_nohaplotig	CDS	77842612	77843052	.	+	0	Parent=comp162746_c0_seq1.mrna7
ChrX	gffcl	locus	77895751	78089158	.	+	.	ID=RLOC_00004324;geneIDs=comp164964_c0_seq1.path2;transcripts=comp164964_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	77895751	78089158	.	+	.	ID=comp164964_c0_seq1.mrna2;geneID=comp164964_c0_seq1.path2;Name=comp164964_c0_seq1;Dir=sensecoverage=98.3;identity=97.9;matches=283;mismatches=6;indels=0;unknowns=0;Target=comp164964_c0_seq1 71 166 +;locus=RLOC_00004324
ChrX	stalkie_big_nohaplotig	exon	77895751	77895810	100	+	.	Parent=comp164964_c0_seq1.mrna2;Target=comp164964_c0_seq1 1 60 +
ChrX	stalkie_big_nohaplotig	exon	77896448	77896451	100	+	.	Parent=comp164964_c0_seq1.mrna2;Target=comp164964_c0_seq1 61 64 +
ChrX	stalkie_big_nohaplotig	exon	78088934	78089158	97	+	.	Parent=comp164964_c0_seq1.mrna2;Target=comp164964_c0_seq1 65 289 +
ChrX	stalkie_big_nohaplotig	CDS	78088940	78089035	.	+	0	Parent=comp164964_c0_seq1.mrna2
ChrX	gffcl	locus	77897073	77897955	.	+	.	ID=RLOC_00004325;geneIDs=comp152453_c0_seq1.path4;transcripts=comp152453_c0_seq1.mrna4
ChrX	stalkie_big_nohaplotig	mRNA	77897073	77897955	.	+	.	ID=comp152453_c0_seq1.mrna4;geneID=comp152453_c0_seq1.path4;Name=comp152453_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=809;mismatches=2;indels=1;unknowns=0;Target=comp152453_c0_seq1 487 633 .;locus=RLOC_00004325
ChrX	stalkie_big_nohaplotig	exon	77897073	77897095	95	+	.	Parent=comp152453_c0_seq1.mrna4;Target=comp152453_c0_seq1 790 812 -
ChrX	stalkie_big_nohaplotig	exon	77897168	77897955	99	+	.	Parent=comp152453_c0_seq1.mrna4;Target=comp152453_c0_seq1 1 789 -
ChrX	stalkie_big_nohaplotig	CDS	77897324	77897470	.	+	0	Parent=comp152453_c0_seq1.mrna4
ChrX	gffcl	locus	77958327	77958925	.	-	.	ID=RLOC_00004327;geneIDs=comp113221_c0_seq1.path1;transcripts=comp113221_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	77958327	77958925	.	-	.	ID=comp113221_c0_seq1.mrna1;geneID=comp113221_c0_seq1.path1;Name=comp113221_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=599;mismatches=0;indels=0;unknowns=0;Target=comp113221_c0_seq1 599 1 .;CDS_Target=comp113221_c0_seq1 419 324 .;locus=RLOC_00004327
ChrX	stalkie_big_nohaplotig	exon	77958327	77958925	100	-	.	Parent=comp113221_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	77958507	77958602	.	-	0	Parent=comp113221_c0_seq1.mrna1
ChrX	gffcl	locus	77974312	78007816	.	+	.	ID=RLOC_00004328;geneIDs=comp153770_c0_seq1.path1,comp154091_c1_seq1.path1;transcripts=comp154091_c1_seq1.mrna1,comp153770_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	77974312	77975070	.	+	.	ID=comp154091_c1_seq1.mrna1;geneID=comp154091_c1_seq1.path1;Name=comp154091_c1_seq1;Dir=antisensecoverage=93.5;identity=100.0;matches=644;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004328
ChrX	stalkie_big_nohaplotig	exon	77974312	77974580	100	+	.	Parent=comp154091_c1_seq1.mrna1;Target=comp154091_c1_seq1 421 689 -
ChrX	stalkie_big_nohaplotig	exon	77974640	77974707	100	+	.	Parent=comp154091_c1_seq1.mrna1;Target=comp154091_c1_seq1 353 420 -
ChrX	stalkie_big_nohaplotig	exon	77974764	77975070	100	+	.	Parent=comp154091_c1_seq1.mrna1;Target=comp154091_c1_seq1 46 352 -
ChrX	stalkie_big_nohaplotig	CDS	77974314	77974580	.	+	0	Parent=comp154091_c1_seq1.mrna1;Target=comp154091_c1_seq1 421 687 .
ChrX	stalkie_big_nohaplotig	CDS	77974640	77974684	.	+	0	Parent=comp154091_c1_seq1.mrna1;Target=comp154091_c1_seq1 376 420 .
ChrX	stalkie_big_nohaplotig	mRNA	77974999	78007816	.	+	.	ID=comp153770_c0_seq1.mrna1;geneID=comp153770_c0_seq1.path1;Name=comp153770_c0_seq1;Dir=indeterminatecoverage=93.7;identity=87.8;matches=768;mismatches=91;indels=16;unknowns=0;Target=comp153770_c0_seq1 613 569 .;locus=RLOC_00004328
ChrX	stalkie_big_nohaplotig	exon	77974999	77975009	100	+	.	Parent=comp153770_c0_seq1.mrna1;Target=comp153770_c0_seq1 75 65 .
ChrX	stalkie_big_nohaplotig	exon	77982206	77982214	100	+	.	Parent=comp153770_c0_seq1.mrna1;Target=comp153770_c0_seq1 89 81 .
ChrX	stalkie_big_nohaplotig	exon	77989822	77989827	100	+	.	Parent=comp153770_c0_seq1.mrna1;Target=comp153770_c0_seq1 98 93 .
ChrX	stalkie_big_nohaplotig	exon	78006813	78007266	98	+	.	Parent=comp153770_c0_seq1.mrna1;Target=comp153770_c0_seq1 552 99 .
ChrX	stalkie_big_nohaplotig	exon	78007388	78007558	50	+	.	Parent=comp153770_c0_seq1.mrna1;Target=comp153770_c0_seq1 712 553 .
ChrX	stalkie_big_nohaplotig	exon	78007588	78007647	88	+	.	Parent=comp153770_c0_seq1.mrna1;Target=comp153770_c0_seq1 778 716 .
ChrX	stalkie_big_nohaplotig	exon	78007658	78007816	93	+	.	Parent=comp153770_c0_seq1.mrna1;Target=comp153770_c0_seq1 1053 893 .
ChrX	stalkie_big_nohaplotig	CDS	78007407	78007459	.	+	0	Parent=comp153770_c0_seq1.mrna1
ChrX	gffcl	locus	77983898	77984912	.	+	.	ID=RLOC_00004329;geneIDs=comp142856_c0_seq1.path1;transcripts=comp142856_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	77983898	77984912	.	+	.	ID=comp142856_c0_seq1.mrna1;geneID=comp142856_c0_seq1.path1;Name=comp142856_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1013;mismatches=2;indels=0;unknowns=0;Target=comp142856_c0_seq1 1015 1 .;CDS_Target=comp142856_c0_seq1 686 564 .;locus=RLOC_00004329
ChrX	stalkie_big_nohaplotig	exon	77983898	77984912	99	+	.	Parent=comp142856_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	77984461	77984583	.	+	0	Parent=comp142856_c0_seq1.mrna1
ChrX	gffcl	locus	77986389	77987091	.	+	.	ID=RLOC_00004330;geneIDs=comp135321_c0_seq1.path1;transcripts=comp135321_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	77986389	77987091	.	+	.	ID=comp135321_c0_seq1.mrna1;geneID=comp135321_c0_seq1.path1;Name=comp135321_c0_seq1;Dir=antisensecoverage=100.0;identity=98.8;matches=580;mismatches=7;indels=0;unknowns=0;locus=RLOC_00004330
ChrX	stalkie_big_nohaplotig	exon	77986389	77986498	100	+	.	Parent=comp135321_c0_seq1.mrna1;Target=comp135321_c0_seq1 478 587 -
ChrX	stalkie_big_nohaplotig	exon	77986562	77986642	100	+	.	Parent=comp135321_c0_seq1.mrna1;Target=comp135321_c0_seq1 397 477 -
ChrX	stalkie_big_nohaplotig	exon	77986696	77987091	98	+	.	Parent=comp135321_c0_seq1.mrna1;Target=comp135321_c0_seq1 1 396 -
ChrX	stalkie_big_nohaplotig	CDS	77986391	77986498	.	+	0	Parent=comp135321_c0_seq1.mrna1;Target=comp135321_c0_seq1 478 585 .
ChrX	stalkie_big_nohaplotig	CDS	77986562	77986642	.	+	0	Parent=comp135321_c0_seq1.mrna1;Target=comp135321_c0_seq1 397 477 .
ChrX	stalkie_big_nohaplotig	CDS	77986696	77987007	.	+	0	Parent=comp135321_c0_seq1.mrna1;Target=comp135321_c0_seq1 85 396 .
ChrX	gffcl	locus	77994722	77995283	.	-	.	ID=RLOC_00004331;geneIDs=comp164964_c0_seq1.path1;transcripts=comp164964_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	77994722	77995283	.	-	.	ID=comp164964_c0_seq1.mrna1;geneID=comp164964_c0_seq1.path1;Name=comp164964_c0_seq1;Dir=sensecoverage=100.0;identity=98.6;matches=290;mismatches=4;indels=0;unknowns=0;Target=comp164964_c0_seq1 71 166 +;locus=RLOC_00004331
ChrX	stalkie_big_nohaplotig	exon	77994722	77994955	99	-	.	Parent=comp164964_c0_seq1.mrna1;Target=comp164964_c0_seq1 61 294 +
ChrX	stalkie_big_nohaplotig	exon	77995224	77995283	95	-	.	Parent=comp164964_c0_seq1.mrna1;Target=comp164964_c0_seq1 1 60 +
ChrX	stalkie_big_nohaplotig	CDS	77994850	77994945	.	-	0	Parent=comp164964_c0_seq1.mrna1
ChrX	gffcl	locus	77994979	77995054	.	-	.	ID=RLOC_00004332;geneIDs=comp162229_c0_seq1.path1;transcripts=comp162229_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	77994979	77995054	.	-	.	ID=comp162229_c0_seq1.mrna1;geneID=comp162229_c0_seq1.path1;Name=comp162229_c0_seq1;Dir=indeterminatecoverage=2.5;identity=98.7;matches=75;mismatches=1;indels=0;unknowns=0;Target=comp162229_c0_seq1 76 1 .;locus=RLOC_00004332
ChrX	stalkie_big_nohaplotig	exon	77994979	77995054	98	-	.	Parent=comp162229_c0_seq1.mrna1
ChrX	gffcl	locus	77996301	77997256	.	+	.	ID=RLOC_00004333;geneIDs=comp160114_c0_seq1.path1;transcripts=comp160114_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	77996301	77997256	.	+	.	ID=comp160114_c0_seq1.mrna1;geneID=comp160114_c0_seq1.path1;Name=comp160114_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.2;matches=927;mismatches=27;indels=10;unknowns=0;Target=comp160114_c0_seq1 317 210 .;locus=RLOC_00004333
ChrX	stalkie_big_nohaplotig	exon	77996301	77996645	91	+	.	Parent=comp160114_c0_seq1.mrna1;Target=comp160114_c0_seq1 354 1 .
ChrX	stalkie_big_nohaplotig	exon	77996648	77997256	98	+	.	Parent=comp160114_c0_seq1.mrna1;Target=comp160114_c0_seq1 1110 501 .
ChrX	stalkie_big_nohaplotig	CDS	77996501	77996608	.	+	0	Parent=comp160114_c0_seq1.mrna1
ChrX	gffcl	locus	78002170	78002284	.	-	.	ID=RLOC_00004334;geneIDs=FBgn0032197.1.path1;transcripts=FBgn0032197.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	78002170	78002284	.	-	.	ID=FBgn0032197.1.mrna1;geneID=FBgn0032197.1.path1;Name=FBgn0032197.1;Dir=indeterminatecoverage=7.1;identity=100.0;matches=115;mismatches=0;indels=0;unknowns=0;Target=FBgn0032197.1 115 1 .;locus=RLOC_00004334
ChrX	stalkie_big_nohaplotig	exon	78002170	78002284	100	-	.	Parent=FBgn0032197.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	78002170	78002284	.	-	0	Parent=FBgn0032197.1.mrna1
ChrX	gffcl	locus	78035537	78066338	.	+	.	ID=RLOC_00004335;geneIDs=comp155819_c0_seq1.path1;transcripts=comp155819_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	78035537	78066338	.	+	.	ID=comp155819_c0_seq1.mrna1;geneID=comp155819_c0_seq1.path1;Name=comp155819_c0_seq1;Dir=sensecoverage=99.9;identity=99.9;matches=1102;mismatches=1;indels=0;unknowns=0;Target=comp155819_c0_seq1 393 743 +;locus=RLOC_00004335
ChrX	stalkie_big_nohaplotig	exon	78035537	78035560	100	+	.	Parent=comp155819_c0_seq1.mrna1;Target=comp155819_c0_seq1 1 24 +
ChrX	stalkie_big_nohaplotig	exon	78037303	78037377	100	+	.	Parent=comp155819_c0_seq1.mrna1;Target=comp155819_c0_seq1 25 99 +
ChrX	stalkie_big_nohaplotig	exon	78039156	78039316	99	+	.	Parent=comp155819_c0_seq1.mrna1;Target=comp155819_c0_seq1 100 260 +
ChrX	stalkie_big_nohaplotig	exon	78045851	78045954	100	+	.	Parent=comp155819_c0_seq1.mrna1;Target=comp155819_c0_seq1 261 364 +
ChrX	stalkie_big_nohaplotig	exon	78063922	78064449	100	+	.	Parent=comp155819_c0_seq1.mrna1;Target=comp155819_c0_seq1 365 892 +
ChrX	stalkie_big_nohaplotig	exon	78066128	78066338	100	+	.	Parent=comp155819_c0_seq1.mrna1;Target=comp155819_c0_seq1 893 1103 +
ChrX	stalkie_big_nohaplotig	CDS	78063950	78064300	.	+	0	Parent=comp155819_c0_seq1.mrna1
ChrX	gffcl	locus	78080271	78081108	.	+	.	ID=RLOC_00004336;geneIDs=comp139500_c1_seq1.path1;transcripts=comp139500_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	78080271	78081108	.	+	.	ID=comp139500_c1_seq1.mrna1;geneID=comp139500_c1_seq1.path1;Name=comp139500_c1_seq1;Dir=indeterminatecoverage=99.9;identity=99.8;matches=836;mismatches=2;indels=0;unknowns=0;Target=comp139500_c1_seq1 839 2 .;CDS_Target=comp139500_c1_seq1 404 231 .;locus=RLOC_00004336
ChrX	stalkie_big_nohaplotig	exon	78080271	78081108	99	+	.	Parent=comp139500_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	78080500	78080673	.	+	0	Parent=comp139500_c1_seq1.mrna1
ChrX	gffcl	locus	78131274	78240597	.	-	.	ID=RLOC_00004337;geneIDs=comp163324_c0_seq1.path1,comp163324_c0_seq1.path2;transcripts=comp163324_c0_seq1.mrna2,comp163324_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	78131274	78240142	.	-	.	ID=comp163324_c0_seq1.mrna2;geneID=comp163324_c0_seq1.path2;Name=comp163324_c0_seq1;Dir=indeterminatecoverage=64.2;identity=95.9;matches=1473;mismatches=26;indels=37;unknowns=0;Target=comp163324_c0_seq1 2033 1815 .;locus=RLOC_00004337
ChrX	stalkie_big_nohaplotig	exon	78131274	78131642	99	-	.	Parent=comp163324_c0_seq1.mrna2;Target=comp163324_c0_seq1 2066 1698 .
ChrX	stalkie_big_nohaplotig	exon	78131701	78131866	92	-	.	Parent=comp163324_c0_seq1.mrna2;Target=comp163324_c0_seq1 1697 1532 .
ChrX	stalkie_big_nohaplotig	exon	78205317	78205320	100	-	.	Parent=comp163324_c0_seq1.mrna2;Target=comp163324_c0_seq1 1531 1528 .
ChrX	stalkie_big_nohaplotig	exon	78233363	78233471	94	-	.	Parent=comp163324_c0_seq1.mrna2;Target=comp163324_c0_seq1 1527 1414 .
ChrX	stalkie_big_nohaplotig	exon	78238751	78239147	99	-	.	Parent=comp163324_c0_seq1.mrna2;Target=comp163324_c0_seq1 1413 1017 .
ChrX	stalkie_big_nohaplotig	exon	78239218	78239539	88	-	.	Parent=comp163324_c0_seq1.mrna2;Target=comp163324_c0_seq1 1016 677 .
ChrX	stalkie_big_nohaplotig	exon	78240004	78240142	100	-	.	Parent=comp163324_c0_seq1.mrna2;Target=comp163324_c0_seq1 676 538 .
ChrX	stalkie_big_nohaplotig	CDS	78131307	78131525	.	-	0	Parent=comp163324_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	78234932	78240597	.	-	.	ID=comp163324_c0_seq1.mrna1;geneID=comp163324_c0_seq1.path1;Name=comp163324_c0_seq1;Dir=sensecoverage=22.6;identity=93.1;matches=500;mismatches=32;indels=5;unknowns=0;locus=RLOC_00004337
ChrX	stalkie_big_nohaplotig	exon	78234932	78235076	99	-	.	Parent=comp163324_c0_seq1.mrna1;Target=comp163324_c0_seq1 392 537 +
ChrX	stalkie_big_nohaplotig	exon	78235136	78235354	96	-	.	Parent=comp163324_c0_seq1.mrna1;Target=comp163324_c0_seq1 171 391 +
ChrX	stalkie_big_nohaplotig	exon	78238430	78238434	100	-	.	Parent=comp163324_c0_seq1.mrna1;Target=comp163324_c0_seq1 166 170 +
ChrX	stalkie_big_nohaplotig	exon	78238800	78238805	100	-	.	Parent=comp163324_c0_seq1.mrna1;Target=comp163324_c0_seq1 160 165 +
ChrX	stalkie_big_nohaplotig	exon	78240441	78240597	82	-	.	Parent=comp163324_c0_seq1.mrna1;Target=comp163324_c0_seq1 1 159 +
ChrX	gffcl	locus	78132775	78133085	.	-	.	ID=RLOC_00004338;geneIDs=comp151839_c1_seq1.path2;transcripts=comp151839_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	78132775	78133085	.	-	.	ID=comp151839_c1_seq1.mrna2;geneID=comp151839_c1_seq1.path2;Name=comp151839_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=309;mismatches=2;indels=2;unknowns=0;Target=comp151839_c1_seq1 313 1 .;CDS_Target=comp151839_c1_seq1 160 2 .;locus=RLOC_00004338
ChrX	stalkie_big_nohaplotig	exon	78132775	78133085	98	-	.	Parent=comp151839_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	78132928	78133084	.	-	0	Parent=comp151839_c1_seq1.mrna2
ChrX	gffcl	locus	78133906	78135076	.	-	.	ID=RLOC_00004339;geneIDs=comp96000_c0_seq1.path1;transcripts=comp96000_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	78133906	78135076	.	-	.	ID=comp96000_c0_seq1.mrna1;geneID=comp96000_c0_seq1.path1;Name=comp96000_c0_seq1;Dir=antisensecoverage=99.5;identity=99.8;matches=613;mismatches=1;indels=0;unknowns=0;Target=comp96000_c0_seq1 71 199 .;locus=RLOC_00004339
ChrX	stalkie_big_nohaplotig	exon	78133906	78133951	97	-	.	Parent=comp96000_c0_seq1.mrna1;Target=comp96000_c0_seq1 4 49 -
ChrX	stalkie_big_nohaplotig	exon	78134448	78134858	100	-	.	Parent=comp96000_c0_seq1.mrna1;Target=comp96000_c0_seq1 50 460 -
ChrX	stalkie_big_nohaplotig	exon	78134920	78135076	100	-	.	Parent=comp96000_c0_seq1.mrna1;Target=comp96000_c0_seq1 461 617 -
ChrX	stalkie_big_nohaplotig	CDS	78134469	78134597	.	-	0	Parent=comp96000_c0_seq1.mrna1
ChrX	gffcl	locus	78167994	78168304	.	+	.	ID=RLOC_00004340;geneIDs=comp151839_c1_seq1.path1;transcripts=comp151839_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	78167994	78168304	.	+	.	ID=comp151839_c1_seq1.mrna1;geneID=comp151839_c1_seq1.path1;Name=comp151839_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=310;mismatches=1;indels=2;unknowns=0;Target=comp151839_c1_seq1 313 1 .;CDS_Target=comp151839_c1_seq1 160 2 .;locus=RLOC_00004340
ChrX	stalkie_big_nohaplotig	exon	78167994	78168304	99	+	.	Parent=comp151839_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	78167995	78168151	.	+	0	Parent=comp151839_c1_seq1.mrna1
ChrX	gffcl	locus	78209291	78210070	.	+	.	ID=RLOC_00004341;geneIDs=comp57386_c0_seq1.path1;transcripts=comp57386_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	78209291	78210070	.	+	.	ID=comp57386_c0_seq1.mrna1;geneID=comp57386_c0_seq1.path1;Name=comp57386_c0_seq1;Dir=sensecoverage=49.7;identity=100.0;matches=647;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004341
ChrX	stalkie_big_nohaplotig	exon	78209291	78209563	100	+	.	Parent=comp57386_c0_seq1.mrna1;Target=comp57386_c0_seq1 1 273 +
ChrX	stalkie_big_nohaplotig	exon	78209643	78209729	100	+	.	Parent=comp57386_c0_seq1.mrna1;Target=comp57386_c0_seq1 274 360 +
ChrX	stalkie_big_nohaplotig	exon	78209784	78210070	100	+	.	Parent=comp57386_c0_seq1.mrna1;Target=comp57386_c0_seq1 361 647 +
ChrX	stalkie_big_nohaplotig	CDS	78209492	78209563	.	+	0	Parent=comp57386_c0_seq1.mrna1;Target=comp57386_c0_seq1 202 273 +
ChrX	stalkie_big_nohaplotig	CDS	78209643	78209729	.	+	0	Parent=comp57386_c0_seq1.mrna1;Target=comp57386_c0_seq1 274 360 +
ChrX	stalkie_big_nohaplotig	CDS	78209784	78210070	.	+	0	Parent=comp57386_c0_seq1.mrna1;Target=comp57386_c0_seq1 361 647 +
ChrX	gffcl	locus	78209291	78210078	.	-	.	ID=RLOC_00004342;geneIDs=comp57386_c0_seq1.path2;transcripts=comp57386_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	78209291	78210078	.	-	.	ID=comp57386_c0_seq1.mrna2;geneID=comp57386_c0_seq1.path2;Name=comp57386_c0_seq1;Dir=indeterminatecoverage=50.3;identity=100.0;matches=655;mismatches=0;indels=0;unknowns=0;Target=comp57386_c0_seq1 690 648 .;locus=RLOC_00004342
ChrX	stalkie_big_nohaplotig	exon	78209291	78209563	100	-	.	Parent=comp57386_c0_seq1.mrna2;Target=comp57386_c0_seq1 1302 1030 .
ChrX	stalkie_big_nohaplotig	exon	78209643	78209729	100	-	.	Parent=comp57386_c0_seq1.mrna2;Target=comp57386_c0_seq1 1029 943 .
ChrX	stalkie_big_nohaplotig	exon	78209784	78210078	100	-	.	Parent=comp57386_c0_seq1.mrna2;Target=comp57386_c0_seq1 942 648 .
ChrX	stalkie_big_nohaplotig	CDS	78210036	78210078	.	-	2	Parent=comp57386_c0_seq1.mrna2
ChrX	gffcl	locus	78212011	78212891	.	+	.	ID=RLOC_00004343;geneIDs=comp134925_c0_seq1.path1;transcripts=comp134925_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	78212011	78212891	.	+	.	ID=comp134925_c0_seq1.mrna1;geneID=comp134925_c0_seq1.path1;Name=comp134925_c0_seq1;Dir=antisensecoverage=93.6;identity=99.9;matches=674;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004343
ChrX	stalkie_big_nohaplotig	exon	78212011	78212236	100	+	.	Parent=comp134925_c0_seq1.mrna1;Target=comp134925_c0_seq1 480 705 -
ChrX	stalkie_big_nohaplotig	exon	78212381	78212467	100	+	.	Parent=comp134925_c0_seq1.mrna1;Target=comp134925_c0_seq1 393 479 -
ChrX	stalkie_big_nohaplotig	exon	78212530	78212891	99	+	.	Parent=comp134925_c0_seq1.mrna1;Target=comp134925_c0_seq1 31 392 -
ChrX	stalkie_big_nohaplotig	CDS	78212171	78212236	.	+	0	Parent=comp134925_c0_seq1.mrna1;Target=comp134925_c0_seq1 480 545 .
ChrX	stalkie_big_nohaplotig	CDS	78212381	78212467	.	+	0	Parent=comp134925_c0_seq1.mrna1;Target=comp134925_c0_seq1 393 479 .
ChrX	stalkie_big_nohaplotig	CDS	78212530	78212865	.	+	0	Parent=comp134925_c0_seq1.mrna1;Target=comp134925_c0_seq1 57 392 .
ChrX	gffcl	locus	78219067	78219296	.	-	.	ID=RLOC_00004344;geneIDs=comp1579485_c0_seq1.path1;transcripts=comp1579485_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	78219067	78219296	.	-	.	ID=comp1579485_c0_seq1.mrna1;geneID=comp1579485_c0_seq1.path1;Name=comp1579485_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=224;mismatches=6;indels=0;unknowns=0;Target=comp1579485_c0_seq1 230 1 .;CDS_Target=comp1579485_c0_seq1 222 121 .;locus=RLOC_00004344
ChrX	stalkie_big_nohaplotig	exon	78219067	78219296	97	-	.	Parent=comp1579485_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	78219075	78219176	.	-	0	Parent=comp1579485_c0_seq1.mrna1
ChrX	gffcl	locus	78289542	78292281	.	-	.	ID=RLOC_00004345;geneIDs=comp70655_c0_seq1.path1;transcripts=comp70655_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	78289542	78292281	.	-	.	ID=comp70655_c0_seq1.mrna1;geneID=comp70655_c0_seq1.path1;Name=comp70655_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=470;mismatches=2;indels=0;unknowns=0;Target=comp70655_c0_seq1 330 470 .;locus=RLOC_00004345
ChrX	stalkie_big_nohaplotig	exon	78289542	78289815	99	-	.	Parent=comp70655_c0_seq1.mrna1;Target=comp70655_c0_seq1 1 274 -
ChrX	stalkie_big_nohaplotig	exon	78292084	78292281	100	-	.	Parent=comp70655_c0_seq1.mrna1;Target=comp70655_c0_seq1 275 472 -
ChrX	stalkie_big_nohaplotig	CDS	78292139	78292279	.	-	0	Parent=comp70655_c0_seq1.mrna1
ChrX	gffcl	locus	78363673	78367239	.	-	.	ID=RLOC_00004346;geneIDs=ORF559.path1;transcripts=ORF559.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	78363673	78367239	.	-	.	ID=ORF559.mrna1;geneID=ORF559.path1;Name=ORF559;Dir=sensecoverage=100.0;identity=98.8;matches=1639;mismatches=17;indels=3;unknowns=0;locus=RLOC_00004346
ChrX	stalkie_big_nohaplotig	exon	78363673	78364008	98	-	.	Parent=ORF559.mrna1;Target=ORF559 1321 1656 +
ChrX	stalkie_big_nohaplotig	exon	78364069	78364155	100	-	.	Parent=ORF559.mrna1;Target=ORF559 1234 1320 +
ChrX	stalkie_big_nohaplotig	exon	78364268	78364347	100	-	.	Parent=ORF559.mrna1;Target=ORF559 1154 1233 +
ChrX	stalkie_big_nohaplotig	exon	78364434	78364740	99	-	.	Parent=ORF559.mrna1;Target=ORF559 847 1153 +
ChrX	stalkie_big_nohaplotig	exon	78364808	78364894	100	-	.	Parent=ORF559.mrna1;Target=ORF559 760 846 +
ChrX	stalkie_big_nohaplotig	exon	78366305	78366628	99	-	.	Parent=ORF559.mrna1;Target=ORF559 436 759 +
ChrX	stalkie_big_nohaplotig	exon	78366690	78366776	100	-	.	Parent=ORF559.mrna1;Target=ORF559 349 435 +
ChrX	stalkie_big_nohaplotig	exon	78366889	78367239	96	-	.	Parent=ORF559.mrna1;Target=ORF559 1 348 +
ChrX	stalkie_big_nohaplotig	CDS	78363673	78364008	.	-	0	Parent=ORF559.mrna1;Target=ORF559 1321 1656 +
ChrX	stalkie_big_nohaplotig	CDS	78364069	78364155	.	-	0	Parent=ORF559.mrna1;Target=ORF559 1234 1320 +
ChrX	stalkie_big_nohaplotig	CDS	78364268	78364347	.	-	2	Parent=ORF559.mrna1;Target=ORF559 1154 1233 +
ChrX	stalkie_big_nohaplotig	CDS	78364434	78364740	.	-	0	Parent=ORF559.mrna1;Target=ORF559 847 1153 +
ChrX	stalkie_big_nohaplotig	CDS	78364808	78364894	.	-	0	Parent=ORF559.mrna1;Target=ORF559 760 846 +
ChrX	stalkie_big_nohaplotig	CDS	78366305	78366628	.	-	0	Parent=ORF559.mrna1;Target=ORF559 436 759 +
ChrX	stalkie_big_nohaplotig	CDS	78366690	78366776	.	-	0	Parent=ORF559.mrna1;Target=ORF559 349 435 +
ChrX	stalkie_big_nohaplotig	CDS	78366889	78367239	.	-	0	Parent=ORF559.mrna1;Target=ORF559 1 348 +
ChrX	gffcl	locus	78368629	78377522	.	+	.	ID=RLOC_00004347;geneIDs=comp146951_c0_seq1.path1;transcripts=comp146951_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	78368629	78377522	.	+	.	ID=comp146951_c0_seq1.mrna1;geneID=comp146951_c0_seq1.path1;Name=comp146951_c0_seq1;Dir=sensecoverage=92.3;identity=99.1;matches=525;mismatches=5;indels=0;unknowns=0;locus=RLOC_00004347
ChrX	stalkie_big_nohaplotig	exon	78368629	78368860	97	+	.	Parent=comp146951_c0_seq1.mrna1;Target=comp146951_c0_seq1 1 232 +
ChrX	stalkie_big_nohaplotig	exon	78377225	78377522	100	+	.	Parent=comp146951_c0_seq1.mrna1;Target=comp146951_c0_seq1 233 530 +
ChrX	stalkie_big_nohaplotig	CDS	78368839	78368860	.	+	0	Parent=comp146951_c0_seq1.mrna1;Target=comp146951_c0_seq1 211 232 +
ChrX	stalkie_big_nohaplotig	CDS	78377225	78377328	.	+	2	Parent=comp146951_c0_seq1.mrna1;Target=comp146951_c0_seq1 233 336 +
ChrX	gffcl	locus	78401785	78402855	.	+	.	ID=RLOC_00004348;geneIDs=ORF1719.path1;transcripts=ORF1719.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	78401785	78402855	.	+	.	ID=ORF1719.mrna1;geneID=ORF1719.path1;Name=ORF1719;Dir=sensecoverage=100.0;identity=99.7;matches=1011;mismatches=3;indels=0;unknowns=0;locus=RLOC_00004348
ChrX	stalkie_big_nohaplotig	exon	78401785	78401848	100	+	.	Parent=ORF1719.mrna1;Target=ORF1719 1 64 +
ChrX	stalkie_big_nohaplotig	exon	78401906	78402855	99	+	.	Parent=ORF1719.mrna1;Target=ORF1719 65 1014 +
ChrX	stalkie_big_nohaplotig	CDS	78401785	78401848	.	+	0	Parent=ORF1719.mrna1;Target=ORF1719 1 64 +
ChrX	stalkie_big_nohaplotig	CDS	78401906	78402855	.	+	2	Parent=ORF1719.mrna1;Target=ORF1719 65 1014 +
ChrX	gffcl	locus	78439893	78440683	.	+	.	ID=RLOC_00004349;geneIDs=ORF2861.path1;transcripts=ORF2861.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	78439893	78440683	.	+	.	ID=ORF2861.mrna1;geneID=ORF2861.path1;Name=ORF2861;Dir=indeterminatecoverage=99.5;identity=100.0;matches=791;mismatches=0;indels=0;unknowns=0;Target=ORF2861 791 1 .;CDS_Target=ORF2861 789 1 .;locus=RLOC_00004349
ChrX	stalkie_big_nohaplotig	exon	78439893	78440683	100	+	.	Parent=ORF2861.mrna1
ChrX	stalkie_big_nohaplotig	CDS	78439893	78440681	.	+	0	Parent=ORF2861.mrna1
ChrX	gffcl	locus	78468755	78470233	.	-	.	ID=RLOC_00004350;geneIDs=ORF734.path1;transcripts=ORF734.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	78468755	78470233	.	-	.	ID=ORF734.mrna1;geneID=ORF734.path1;Name=ORF734;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1479;mismatches=0;indels=0;unknowns=0;Target=ORF734 1479 1 .;locus=RLOC_00004350
ChrX	stalkie_big_nohaplotig	exon	78468755	78470233	100	-	.	Parent=ORF734.mrna1
ChrX	stalkie_big_nohaplotig	CDS	78468755	78470233	.	-	0	Parent=ORF734.mrna1
ChrX	gffcl	locus	78560014	78560906	.	+	.	ID=RLOC_00004351;geneIDs=comp142570_c1_seq1.path1;transcripts=comp142570_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	78560014	78560906	.	+	.	ID=comp142570_c1_seq1.mrna1;geneID=comp142570_c1_seq1.path1;Name=comp142570_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=893;mismatches=0;indels=0;unknowns=0;Target=comp142570_c1_seq1 893 1 .;CDS_Target=comp142570_c1_seq1 550 386 .;locus=RLOC_00004351
ChrX	stalkie_big_nohaplotig	exon	78560014	78560906	100	+	.	Parent=comp142570_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	78560399	78560563	.	+	0	Parent=comp142570_c1_seq1.mrna1
ChrX	gffcl	locus	78693097	78693994	.	+	.	ID=RLOC_00004352;geneIDs=comp155702_c0_seq1.path1;transcripts=comp155702_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	78693097	78693994	.	+	.	ID=comp155702_c0_seq1.mrna1;geneID=comp155702_c0_seq1.path1;Name=comp155702_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=841;mismatches=12;indels=0;unknowns=0;locus=RLOC_00004352
ChrX	stalkie_big_nohaplotig	exon	78693097	78693294	98	+	.	Parent=comp155702_c0_seq1.mrna1;Target=comp155702_c0_seq1 198 1 .
ChrX	stalkie_big_nohaplotig	exon	78693340	78693994	98	+	.	Parent=comp155702_c0_seq1.mrna1;Target=comp155702_c0_seq1 853 199 .
ChrX	stalkie_big_nohaplotig	CDS	78693097	78693294	.	+	0	Parent=comp155702_c0_seq1.mrna1;Target=comp155702_c0_seq1 198 1 .
ChrX	stalkie_big_nohaplotig	CDS	78693340	78693858	.	+	0	Parent=comp155702_c0_seq1.mrna1;Target=comp155702_c0_seq1 717 199 .
ChrX	gffcl	locus	78696463	78699296	.	-	.	ID=RLOC_00004353;geneIDs=comp160661_c0_seq1.path1;transcripts=comp160661_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	78696463	78699296	.	-	.	ID=comp160661_c0_seq1.mrna1;geneID=comp160661_c0_seq1.path1;Name=comp160661_c0_seq1;Dir=sensecoverage=99.9;identity=98.5;matches=1622;mismatches=1;indels=24;unknowns=0;locus=RLOC_00004353
ChrX	stalkie_big_nohaplotig	exon	78696463	78697132	96	-	.	Parent=comp160661_c0_seq1.mrna1;Target=comp160661_c0_seq1 954 1647 +
ChrX	stalkie_big_nohaplotig	exon	78697192	78697310	100	-	.	Parent=comp160661_c0_seq1.mrna1;Target=comp160661_c0_seq1 835 953 +
ChrX	stalkie_big_nohaplotig	exon	78698383	78698885	100	-	.	Parent=comp160661_c0_seq1.mrna1;Target=comp160661_c0_seq1 332 834 +
ChrX	stalkie_big_nohaplotig	exon	78698966	78699296	100	-	.	Parent=comp160661_c0_seq1.mrna1;Target=comp160661_c0_seq1 1 331 +
ChrX	stalkie_big_nohaplotig	CDS	78697279	78697310	.	-	2	Parent=comp160661_c0_seq1.mrna1;Target=comp160661_c0_seq1 835 866 +
ChrX	stalkie_big_nohaplotig	CDS	78698383	78698512	.	-	0	Parent=comp160661_c0_seq1.mrna1;Target=comp160661_c0_seq1 705 834 +
ChrX	gffcl	locus	78904783	78933720	.	-	.	ID=RLOC_00004354;geneIDs=comp75426_c0_seq1.path1;transcripts=comp75426_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	78904783	78933720	.	-	.	ID=comp75426_c0_seq1.mrna1;geneID=comp75426_c0_seq1.path1;Name=comp75426_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=1018;mismatches=0;indels=0;unknowns=0;Target=comp75426_c0_seq1 121 258 +;locus=RLOC_00004354
ChrX	stalkie_big_nohaplotig	exon	78904783	78905000	100	-	.	Parent=comp75426_c0_seq1.mrna1;Target=comp75426_c0_seq1 801 1018 +
ChrX	stalkie_big_nohaplotig	exon	78913190	78913263	100	-	.	Parent=comp75426_c0_seq1.mrna1;Target=comp75426_c0_seq1 727 800 +
ChrX	stalkie_big_nohaplotig	exon	78928848	78928925	100	-	.	Parent=comp75426_c0_seq1.mrna1;Target=comp75426_c0_seq1 649 726 +
ChrX	stalkie_big_nohaplotig	exon	78933073	78933720	100	-	.	Parent=comp75426_c0_seq1.mrna1;Target=comp75426_c0_seq1 1 648 +
ChrX	stalkie_big_nohaplotig	CDS	78933463	78933600	.	-	0	Parent=comp75426_c0_seq1.mrna1
ChrX	gffcl	locus	79127718	79128477	.	+	.	ID=RLOC_00004356;geneIDs=comp1177792_c0_seq1.path1;transcripts=comp1177792_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79127718	79128477	.	+	.	ID=comp1177792_c0_seq1.mrna1;geneID=comp1177792_c0_seq1.path1;Name=comp1177792_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=760;mismatches=0;indels=0;unknowns=0;Target=comp1177792_c0_seq1 760 1 .;CDS_Target=comp1177792_c0_seq1 535 350 .;locus=RLOC_00004356
ChrX	stalkie_big_nohaplotig	exon	79127718	79128477	100	+	.	Parent=comp1177792_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	79128067	79128252	.	+	0	Parent=comp1177792_c0_seq1.mrna1
ChrX	gffcl	locus	79290413	79291450	.	-	.	ID=RLOC_00004357;geneIDs=comp135832_c0_seq1.path1;transcripts=comp135832_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79290413	79291450	.	-	.	ID=comp135832_c0_seq1.mrna1;geneID=comp135832_c0_seq1.path1;Name=comp135832_c0_seq1;Dir=indeterminatecoverage=97.9;identity=99.8;matches=1036;mismatches=2;indels=0;unknowns=0;Target=comp135832_c0_seq1 1060 23 .;CDS_Target=comp135832_c0_seq1 939 868 .;locus=RLOC_00004357
ChrX	stalkie_big_nohaplotig	exon	79290413	79291450	99	-	.	Parent=comp135832_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	79290534	79290605	.	-	0	Parent=comp135832_c0_seq1.mrna1
ChrX	gffcl	locus	79292730	79293318	.	+	.	ID=RLOC_00004358;geneIDs=comp151598_c0_seq1.path1;transcripts=comp151598_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79292730	79293318	.	+	.	ID=comp151598_c0_seq1.mrna1;geneID=comp151598_c0_seq1.path1;Name=comp151598_c0_seq1;Dir=indeterminatecoverage=96.7;identity=100.0;matches=589;mismatches=0;indels=0;unknowns=0;Target=comp151598_c0_seq1 608 20 .;CDS_Target=comp151598_c0_seq1 441 352 .;locus=RLOC_00004358
ChrX	stalkie_big_nohaplotig	exon	79292730	79293318	100	+	.	Parent=comp151598_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	79293062	79293151	.	+	0	Parent=comp151598_c0_seq1.mrna1
ChrX	gffcl	locus	79294755	79295689	.	-	.	ID=RLOC_00004359;geneIDs=comp138153_c0_seq1.path1;transcripts=comp138153_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79294755	79295689	.	-	.	ID=comp138153_c0_seq1.mrna1;geneID=comp138153_c0_seq1.path1;Name=comp138153_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=935;mismatches=0;indels=0;unknowns=0;Target=comp138153_c0_seq1 935 1 .;CDS_Target=comp138153_c0_seq1 720 610 .;locus=RLOC_00004359
ChrX	stalkie_big_nohaplotig	exon	79294755	79295689	100	-	.	Parent=comp138153_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	79294970	79295080	.	-	0	Parent=comp138153_c0_seq1.mrna1
ChrX	gffcl	locus	79297483	79298075	.	+	.	ID=RLOC_00004360;geneIDs=comp147039_c0_seq1.path1;transcripts=comp147039_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79297483	79298075	.	+	.	ID=comp147039_c0_seq1.mrna1;geneID=comp147039_c0_seq1.path1;Name=comp147039_c0_seq1;Dir=indeterminatecoverage=98.3;identity=100.0;matches=593;mismatches=0;indels=0;unknowns=0;Target=comp147039_c0_seq1 603 11 .;CDS_Target=comp147039_c0_seq1 142 11 .;locus=RLOC_00004360
ChrX	stalkie_big_nohaplotig	exon	79297483	79298075	100	+	.	Parent=comp147039_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	79297483	79297614	.	+	0	Parent=comp147039_c0_seq1.mrna1
ChrX	gffcl	locus	79298261	79298996	.	-	.	ID=RLOC_00004361;geneIDs=comp141867_c0_seq1.path1;transcripts=comp141867_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79298261	79298996	.	-	.	ID=comp141867_c0_seq1.mrna1;geneID=comp141867_c0_seq1.path1;Name=comp141867_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=736;mismatches=0;indels=0;unknowns=0;Target=comp141867_c0_seq1 736 1 .;CDS_Target=comp141867_c0_seq1 685 344 .;locus=RLOC_00004361
ChrX	stalkie_big_nohaplotig	exon	79298261	79298996	100	-	.	Parent=comp141867_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	79298312	79298653	.	-	0	Parent=comp141867_c0_seq1.mrna1
ChrX	gffcl	locus	79299975	79300399	.	-	.	ID=RLOC_00004362;geneIDs=comp140178_c0_seq1.path1;transcripts=comp140178_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79299975	79300399	.	-	.	ID=comp140178_c0_seq1.mrna1;geneID=comp140178_c0_seq1.path1;Name=comp140178_c0_seq1;Dir=indeterminatecoverage=100.0;identity=89.1;matches=424;mismatches=1;indels=51;unknowns=0;Target=comp140178_c0_seq1 476 1 .;CDS_Target=comp140178_c0_seq1 51 1 .;locus=RLOC_00004362
ChrX	stalkie_big_nohaplotig	exon	79299975	79300399	89	-	.	Parent=comp140178_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	79300356	79300399	.	-	0	Parent=comp140178_c0_seq1.mrna1
ChrX	gffcl	locus	79305421	79307253	.	+	.	ID=RLOC_00004363;geneIDs=comp154012_c0_seq1.path1;transcripts=comp154012_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79305421	79307253	.	+	.	ID=comp154012_c0_seq1.mrna1;geneID=comp154012_c0_seq1.path1;Name=comp154012_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1833;mismatches=0;indels=0;unknowns=0;Target=comp154012_c0_seq1 1833 1 .;CDS_Target=comp154012_c0_seq1 394 263 .;locus=RLOC_00004363
ChrX	stalkie_big_nohaplotig	exon	79305421	79307253	100	+	.	Parent=comp154012_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	79305683	79305814	.	+	0	Parent=comp154012_c0_seq1.mrna1
ChrX	gffcl	locus	79307285	79308117	.	+	.	ID=RLOC_00004364;geneIDs=comp151294_c0_seq1.path1;transcripts=comp151294_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79307285	79308117	.	+	.	ID=comp151294_c0_seq1.mrna1;geneID=comp151294_c0_seq1.path1;Name=comp151294_c0_seq1;Dir=indeterminatecoverage=97.1;identity=100.0;matches=833;mismatches=0;indels=0;unknowns=0;Target=comp151294_c0_seq1 833 1 .;CDS_Target=comp151294_c0_seq1 373 248 .;locus=RLOC_00004364
ChrX	stalkie_big_nohaplotig	exon	79307285	79308117	100	+	.	Parent=comp151294_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	79307532	79307657	.	+	0	Parent=comp151294_c0_seq1.mrna1
ChrX	gffcl	locus	79343732	79345004	.	+	.	ID=RLOC_00004366;geneIDs=FBgn0031817.1.path1;transcripts=FBgn0031817.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79343732	79345004	.	+	.	ID=FBgn0031817.1.mrna1;geneID=FBgn0031817.1.path1;Name=FBgn0031817.1;Dir=sensecoverage=100.0;identity=99.8;matches=1090;mismatches=2;indels=0;unknowns=0;locus=RLOC_00004366
ChrX	stalkie_big_nohaplotig	exon	79343732	79344067	100	+	.	Parent=FBgn0031817.1.mrna1;Target=FBgn0031817.1 1 336 +
ChrX	stalkie_big_nohaplotig	exon	79344147	79344664	99	+	.	Parent=FBgn0031817.1.mrna1;Target=FBgn0031817.1 337 854 +
ChrX	stalkie_big_nohaplotig	exon	79344767	79345004	99	+	.	Parent=FBgn0031817.1.mrna1;Target=FBgn0031817.1 855 1092 +
ChrX	stalkie_big_nohaplotig	CDS	79343732	79344067	.	+	0	Parent=FBgn0031817.1.mrna1;Target=FBgn0031817.1 1 336 +
ChrX	stalkie_big_nohaplotig	CDS	79344147	79344664	.	+	0	Parent=FBgn0031817.1.mrna1;Target=FBgn0031817.1 337 854 +
ChrX	stalkie_big_nohaplotig	CDS	79344767	79345004	.	+	1	Parent=FBgn0031817.1.mrna1;Target=FBgn0031817.1 855 1092 +
ChrX	gffcl	locus	79354005	79355192	.	-	.	ID=RLOC_00004367;geneIDs=comp154883_c3_seq1.path1;transcripts=comp154883_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79354005	79355192	.	-	.	ID=comp154883_c3_seq1.mrna1;geneID=comp154883_c3_seq1.path1;Name=comp154883_c3_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1188;mismatches=0;indels=0;unknowns=0;Target=comp154883_c3_seq1 1188 1 .;CDS_Target=comp154883_c3_seq1 219 85 .;locus=RLOC_00004367
ChrX	stalkie_big_nohaplotig	exon	79354005	79355192	100	-	.	Parent=comp154883_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	79354974	79355108	.	-	0	Parent=comp154883_c3_seq1.mrna1
ChrX	gffcl	locus	79355519	79392718	.	+	.	ID=RLOC_00004368;geneIDs=comp149511_c0_seq1.path1;transcripts=comp149511_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79355519	79392718	.	+	.	ID=comp149511_c0_seq1.mrna1;geneID=comp149511_c0_seq1.path1;Name=comp149511_c0_seq1;Dir=indeterminatecoverage=95.5;identity=97.2;matches=1060;mismatches=11;indels=20;unknowns=0;Target=comp149511_c0_seq1 743 684 .;locus=RLOC_00004368
ChrX	stalkie_big_nohaplotig	exon	79355519	79356520	99	+	.	Parent=comp149511_c0_seq1.mrna1;Target=comp149511_c0_seq1 1002 1 .
ChrX	stalkie_big_nohaplotig	exon	79364146	79364164	51	+	.	Parent=comp149511_c0_seq1.mrna1;Target=comp149511_c0_seq1 1037 1003 .
ChrX	stalkie_big_nohaplotig	exon	79369769	79369777	100	+	.	Parent=comp149511_c0_seq1.mrna1;Target=comp149511_c0_seq1 1046 1038 .
ChrX	stalkie_big_nohaplotig	exon	79374735	79374740	100	+	.	Parent=comp149511_c0_seq1.mrna1;Target=comp149511_c0_seq1 1052 1047 .
ChrX	stalkie_big_nohaplotig	exon	79383849	79383872	60	+	.	Parent=comp149511_c0_seq1.mrna1;Target=comp149511_c0_seq1 1080 1053 .
ChrX	stalkie_big_nohaplotig	exon	79385150	79385154	100	+	.	Parent=comp149511_c0_seq1.mrna1;Target=comp149511_c0_seq1 1085 1081 .
ChrX	stalkie_big_nohaplotig	exon	79392713	79392718	100	+	.	Parent=comp149511_c0_seq1.mrna1;Target=comp149511_c0_seq1 1091 1086 .
ChrX	stalkie_big_nohaplotig	CDS	79356202	79356261	.	+	0	Parent=comp149511_c0_seq1.mrna1
ChrX	gffcl	locus	79356565	79358363	.	-	.	ID=RLOC_00004369;geneIDs=comp150888_c0_seq1.path1;transcripts=comp150888_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79356565	79358363	.	-	.	ID=comp150888_c0_seq1.mrna1;geneID=comp150888_c0_seq1.path1;Name=comp150888_c0_seq1;Dir=indeterminatecoverage=95.2;identity=99.5;matches=1137;mismatches=4;indels=2;unknowns=0;Target=comp150888_c0_seq1 1043 897 .;locus=RLOC_00004369
ChrX	stalkie_big_nohaplotig	exon	79356565	79356705	97	-	.	Parent=comp150888_c0_seq1.mrna1;Target=comp150888_c0_seq1 1197 1059 .
ChrX	stalkie_big_nohaplotig	exon	79357362	79358363	99	-	.	Parent=comp150888_c0_seq1.mrna1;Target=comp150888_c0_seq1 1058 57 .
ChrX	stalkie_big_nohaplotig	CDS	79357377	79357523	.	-	0	Parent=comp150888_c0_seq1.mrna1
ChrX	gffcl	locus	79356881	79357191	.	+	.	ID=RLOC_00004370;geneIDs=comp116805_c0_seq1.path1;transcripts=comp116805_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79356881	79357191	.	+	.	ID=comp116805_c0_seq1.mrna1;geneID=comp116805_c0_seq1.path1;Name=comp116805_c0_seq1;Dir=indeterminatecoverage=94.5;identity=100.0;matches=311;mismatches=0;indels=0;unknowns=0;Target=comp116805_c0_seq1 311 1 .;CDS_Target=comp116805_c0_seq1 43 2 .;locus=RLOC_00004370
ChrX	stalkie_big_nohaplotig	exon	79356881	79357191	100	+	.	Parent=comp116805_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	79356882	79356923	.	+	0	Parent=comp116805_c0_seq1.mrna1
ChrX	gffcl	locus	79359133	79360574	.	.	.	ID=RLOC_00004371;geneIDs=comp97974_c0_seq1.path1,comp154706_c3_seq1.path1;transcripts=comp154706_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79359478	79360574	.	+	.	ID=comp154706_c3_seq1.mrna1;geneID=comp154706_c3_seq1.path1;Name=comp154706_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1097;mismatches=0;indels=4;unknowns=0;Target=comp154706_c3_seq1 1101 1 .;CDS_Target=comp154706_c3_seq1 417 274 .;locus=RLOC_00004371
ChrX	stalkie_big_nohaplotig	exon	79359478	79360574	99	+	.	Parent=comp154706_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	79359751	79359894	.	+	0	Parent=comp154706_c3_seq1.mrna1
ChrX	gffcl	locus	79361420	79361755	.	+	.	ID=RLOC_00004372;geneIDs=comp907566_c0_seq1.path1;transcripts=comp907566_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79361420	79361755	.	+	.	ID=comp907566_c0_seq1.mrna1;geneID=comp907566_c0_seq1.path1;Name=comp907566_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=336;mismatches=0;indels=0;unknowns=0;Target=comp907566_c0_seq1 336 1 .;CDS_Target=comp907566_c0_seq1 289 200 .;locus=RLOC_00004372
ChrX	stalkie_big_nohaplotig	exon	79361420	79361755	100	+	.	Parent=comp907566_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	79361619	79361708	.	+	0	Parent=comp907566_c0_seq1.mrna1
ChrX	gffcl	locus	79361796	79362676	.	+	.	ID=RLOC_00004373;geneIDs=comp151972_c0_seq1.path1;transcripts=comp151972_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79361796	79362676	.	+	.	ID=comp151972_c0_seq1.mrna1;geneID=comp151972_c0_seq1.path1;Name=comp151972_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=880;mismatches=1;indels=1;unknowns=0;Target=comp151972_c0_seq1 882 1 .;CDS_Target=comp151972_c0_seq1 355 245 .;locus=RLOC_00004373
ChrX	stalkie_big_nohaplotig	exon	79361796	79362676	99	+	.	Parent=comp151972_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	79362040	79362149	.	+	0	Parent=comp151972_c0_seq1.mrna1
ChrX	gffcl	locus	79362761	79363166	.	-	.	ID=RLOC_00004374;geneIDs=comp86098_c0_seq1.path1;transcripts=comp86098_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79362761	79363166	.	-	.	ID=comp86098_c0_seq1.mrna1;geneID=comp86098_c0_seq1.path1;Name=comp86098_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=406;mismatches=0;indels=1;unknowns=0;Target=comp86098_c0_seq1 407 1 .;CDS_Target=comp86098_c0_seq1 208 95 .;locus=RLOC_00004374
ChrX	stalkie_big_nohaplotig	exon	79362761	79363166	99	-	.	Parent=comp86098_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	79362959	79363072	.	-	0	Parent=comp86098_c0_seq1.mrna1
ChrX	gffcl	locus	79368274	79368771	.	-	.	ID=RLOC_00004375;geneIDs=comp113316_c0_seq1.path1;transcripts=comp113316_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79368274	79368771	.	-	.	ID=comp113316_c0_seq1.mrna1;geneID=comp113316_c0_seq1.path1;Name=comp113316_c0_seq1;Dir=indeterminatecoverage=98.0;identity=99.8;matches=497;mismatches=1;indels=0;unknowns=0;Target=comp113316_c0_seq1 508 11 .;CDS_Target=comp113316_c0_seq1 406 302 .;locus=RLOC_00004375
ChrX	stalkie_big_nohaplotig	exon	79368274	79368771	99	-	.	Parent=comp113316_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	79368376	79368480	.	-	0	Parent=comp113316_c0_seq1.mrna1
ChrX	gffcl	locus	79687792	79688847	.	+	.	ID=RLOC_00004376;geneIDs=comp155993_c0_seq1.path1;transcripts=comp155993_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79687792	79688847	.	+	.	ID=comp155993_c0_seq1.mrna1;geneID=comp155993_c0_seq1.path1;Name=comp155993_c0_seq1;Dir=antisensecoverage=97.9;identity=99.9;matches=851;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004376
ChrX	stalkie_big_nohaplotig	exon	79687792	79687928	99	+	.	Parent=comp155993_c0_seq1.mrna1;Target=comp155993_c0_seq1 734 870 -
ChrX	stalkie_big_nohaplotig	exon	79687986	79688125	100	+	.	Parent=comp155993_c0_seq1.mrna1;Target=comp155993_c0_seq1 594 733 -
ChrX	stalkie_big_nohaplotig	exon	79688207	79688545	100	+	.	Parent=comp155993_c0_seq1.mrna1;Target=comp155993_c0_seq1 255 593 -
ChrX	stalkie_big_nohaplotig	exon	79688612	79688847	100	+	.	Parent=comp155993_c0_seq1.mrna1;Target=comp155993_c0_seq1 19 254 -
ChrX	stalkie_big_nohaplotig	CDS	79687910	79687928	.	+	0	Parent=comp155993_c0_seq1.mrna1;Target=comp155993_c0_seq1 734 752 .
ChrX	stalkie_big_nohaplotig	CDS	79687986	79688125	.	+	2	Parent=comp155993_c0_seq1.mrna1;Target=comp155993_c0_seq1 594 733 .
ChrX	stalkie_big_nohaplotig	CDS	79688207	79688545	.	+	0	Parent=comp155993_c0_seq1.mrna1;Target=comp155993_c0_seq1 255 593 .
ChrX	stalkie_big_nohaplotig	CDS	79688612	79688788	.	+	0	Parent=comp155993_c0_seq1.mrna1;Target=comp155993_c0_seq1 78 254 .
ChrX	gffcl	locus	79799406	79825658	.	+	.	ID=RLOC_00004377;geneIDs=comp163762_c3_seq1.path3;transcripts=comp163762_c3_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	79799406	79825658	.	+	.	ID=comp163762_c3_seq1.mrna3;geneID=comp163762_c3_seq1.path3;Name=comp163762_c3_seq1;Dir=indeterminatecoverage=97.9;identity=99.0;matches=2362;mismatches=9;indels=15;unknowns=0;Target=comp163762_c3_seq1 1857 352 .;locus=RLOC_00004377
ChrX	stalkie_big_nohaplotig	exon	79799406	79799415	100	+	.	Parent=comp163762_c3_seq1.mrna3;Target=comp163762_c3_seq1 62 53 .
ChrX	stalkie_big_nohaplotig	exon	79821243	79821260	51	+	.	Parent=comp163762_c3_seq1.mrna3;Target=comp163762_c3_seq1 95 63 .
ChrX	stalkie_big_nohaplotig	exon	79823316	79825658	99	+	.	Parent=comp163762_c3_seq1.mrna3;Target=comp163762_c3_seq1 2438 96 .
ChrX	stalkie_big_nohaplotig	CDS	79823572	79825077	.	+	0	Parent=comp163762_c3_seq1.mrna3
ChrX	gffcl	locus	79905546	79907258	.	+	.	ID=RLOC_00004378;geneIDs=FBgn0052086.2.path1;transcripts=FBgn0052086.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79905546	79907258	.	+	.	ID=FBgn0052086.2.mrna1;geneID=FBgn0052086.2.path1;Name=FBgn0052086.2;Dir=sensecoverage=100.0;identity=100.0;matches=1494;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004378
ChrX	stalkie_big_nohaplotig	exon	79905546	79906066	100	+	.	Parent=FBgn0052086.2.mrna1;Target=FBgn0052086.2 1 521 +
ChrX	stalkie_big_nohaplotig	exon	79906136	79906309	100	+	.	Parent=FBgn0052086.2.mrna1;Target=FBgn0052086.2 522 695 +
ChrX	stalkie_big_nohaplotig	exon	79906460	79907258	100	+	.	Parent=FBgn0052086.2.mrna1;Target=FBgn0052086.2 696 1494 +
ChrX	stalkie_big_nohaplotig	CDS	79905546	79906066	.	+	0	Parent=FBgn0052086.2.mrna1;Target=FBgn0052086.2 1 521 +
ChrX	stalkie_big_nohaplotig	CDS	79906136	79906309	.	+	1	Parent=FBgn0052086.2.mrna1;Target=FBgn0052086.2 522 695 +
ChrX	stalkie_big_nohaplotig	CDS	79906460	79907258	.	+	1	Parent=FBgn0052086.2.mrna1;Target=FBgn0052086.2 696 1494 +
ChrX	gffcl	locus	79917735	79921552	.	-	.	ID=RLOC_00004379;geneIDs=comp148752_c0_seq1.path1;transcripts=comp148752_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79917735	79921552	.	-	.	ID=comp148752_c0_seq1.mrna1;geneID=comp148752_c0_seq1.path1;Name=comp148752_c0_seq1;Dir=sensecoverage=94.8;identity=100.0;matches=863;mismatches=0;indels=0;unknowns=0;Target=comp148752_c0_seq1 17 160 +;locus=RLOC_00004379
ChrX	stalkie_big_nohaplotig	exon	79917735	79917973	100	-	.	Parent=comp148752_c0_seq1.mrna1;Target=comp148752_c0_seq1 640 878 +
ChrX	stalkie_big_nohaplotig	exon	79918035	79918127	100	-	.	Parent=comp148752_c0_seq1.mrna1;Target=comp148752_c0_seq1 547 639 +
ChrX	stalkie_big_nohaplotig	exon	79918184	79918275	100	-	.	Parent=comp148752_c0_seq1.mrna1;Target=comp148752_c0_seq1 455 546 +
ChrX	stalkie_big_nohaplotig	exon	79918341	79918446	100	-	.	Parent=comp148752_c0_seq1.mrna1;Target=comp148752_c0_seq1 349 454 +
ChrX	stalkie_big_nohaplotig	exon	79921158	79921230	100	-	.	Parent=comp148752_c0_seq1.mrna1;Target=comp148752_c0_seq1 276 348 +
ChrX	stalkie_big_nohaplotig	exon	79921293	79921552	100	-	.	Parent=comp148752_c0_seq1.mrna1;Target=comp148752_c0_seq1 16 275 +
ChrX	stalkie_big_nohaplotig	CDS	79921408	79921551	.	-	0	Parent=comp148752_c0_seq1.mrna1
ChrX	gffcl	locus	79924677	79926067	.	-	.	ID=RLOC_00004380;geneIDs=comp170434_c0_seq1.path1;transcripts=comp170434_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79924677	79926067	.	-	.	ID=comp170434_c0_seq1.mrna1;geneID=comp170434_c0_seq1.path1;Name=comp170434_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=1316;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004380
ChrX	stalkie_big_nohaplotig	exon	79924677	79925385	100	-	.	Parent=comp170434_c0_seq1.mrna1;Target=comp170434_c0_seq1 608 1316 +
ChrX	stalkie_big_nohaplotig	exon	79925461	79926067	100	-	.	Parent=comp170434_c0_seq1.mrna1;Target=comp170434_c0_seq1 1 607 +
ChrX	stalkie_big_nohaplotig	CDS	79925108	79925385	.	-	2	Parent=comp170434_c0_seq1.mrna1;Target=comp170434_c0_seq1 608 885 +
ChrX	stalkie_big_nohaplotig	CDS	79925461	79925794	.	-	0	Parent=comp170434_c0_seq1.mrna1;Target=comp170434_c0_seq1 274 607 +
ChrX	gffcl	locus	79927113	79929521	.	+	.	ID=RLOC_00004381;geneIDs=FBgn0260639.3.path1;transcripts=FBgn0260639.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79927113	79929521	.	+	.	ID=FBgn0260639.3.mrna1;geneID=FBgn0260639.3.path1;Name=FBgn0260639.3;Dir=sensecoverage=100.0;identity=100.0;matches=1377;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004381
ChrX	stalkie_big_nohaplotig	exon	79927113	79927173	100	+	.	Parent=FBgn0260639.3.mrna1;Target=FBgn0260639.3 1 61 +
ChrX	stalkie_big_nohaplotig	exon	79927249	79927361	100	+	.	Parent=FBgn0260639.3.mrna1;Target=FBgn0260639.3 62 174 +
ChrX	stalkie_big_nohaplotig	exon	79927617	79927706	100	+	.	Parent=FBgn0260639.3.mrna1;Target=FBgn0260639.3 175 264 +
ChrX	stalkie_big_nohaplotig	exon	79927791	79928381	100	+	.	Parent=FBgn0260639.3.mrna1;Target=FBgn0260639.3 265 855 +
ChrX	stalkie_big_nohaplotig	exon	79928455	79928589	100	+	.	Parent=FBgn0260639.3.mrna1;Target=FBgn0260639.3 856 990 +
ChrX	stalkie_big_nohaplotig	exon	79929135	79929521	100	+	.	Parent=FBgn0260639.3.mrna1;Target=FBgn0260639.3 991 1377 +
ChrX	stalkie_big_nohaplotig	CDS	79927113	79927173	.	+	0	Parent=FBgn0260639.3.mrna1;Target=FBgn0260639.3 1 61 +
ChrX	stalkie_big_nohaplotig	CDS	79927249	79927361	.	+	2	Parent=FBgn0260639.3.mrna1;Target=FBgn0260639.3 62 174 +
ChrX	stalkie_big_nohaplotig	CDS	79927617	79927706	.	+	0	Parent=FBgn0260639.3.mrna1;Target=FBgn0260639.3 175 264 +
ChrX	stalkie_big_nohaplotig	CDS	79927791	79928381	.	+	0	Parent=FBgn0260639.3.mrna1;Target=FBgn0260639.3 265 855 +
ChrX	stalkie_big_nohaplotig	CDS	79928455	79928589	.	+	0	Parent=FBgn0260639.3.mrna1;Target=FBgn0260639.3 856 990 +
ChrX	stalkie_big_nohaplotig	CDS	79929135	79929521	.	+	0	Parent=FBgn0260639.3.mrna1;Target=FBgn0260639.3 991 1377 +
ChrX	gffcl	locus	79934881	79939843	.	-	.	ID=RLOC_00004382;geneIDs=FBgn0031484.1.path1;transcripts=FBgn0031484.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79934881	79939843	.	-	.	ID=FBgn0031484.1.mrna1;geneID=FBgn0031484.1.path1;Name=FBgn0031484.1;Dir=sensecoverage=100.0;identity=100.0;matches=1065;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004382
ChrX	stalkie_big_nohaplotig	exon	79934881	79935486	100	-	.	Parent=FBgn0031484.1.mrna1;Target=FBgn0031484.1 460 1065 +
ChrX	stalkie_big_nohaplotig	exon	79935550	79935716	100	-	.	Parent=FBgn0031484.1.mrna1;Target=FBgn0031484.1 293 459 +
ChrX	stalkie_big_nohaplotig	exon	79939552	79939843	100	-	.	Parent=FBgn0031484.1.mrna1;Target=FBgn0031484.1 1 292 +
ChrX	stalkie_big_nohaplotig	CDS	79934881	79935486	.	-	0	Parent=FBgn0031484.1.mrna1;Target=FBgn0031484.1 460 1065 +
ChrX	stalkie_big_nohaplotig	CDS	79935550	79935716	.	-	2	Parent=FBgn0031484.1.mrna1;Target=FBgn0031484.1 293 459 +
ChrX	stalkie_big_nohaplotig	CDS	79939552	79939843	.	-	0	Parent=FBgn0031484.1.mrna1;Target=FBgn0031484.1 1 292 +
ChrX	gffcl	locus	79943431	79944322	.	+	.	ID=RLOC_00004383;geneIDs=FBgn0029648.1.path1;transcripts=FBgn0029648.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79943431	79944322	.	+	.	ID=FBgn0029648.1.mrna1;geneID=FBgn0029648.1.path1;Name=FBgn0029648.1;Dir=sensecoverage=100.0;identity=100.0;matches=750;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004383
ChrX	stalkie_big_nohaplotig	exon	79943431	79943476	100	+	.	Parent=FBgn0029648.1.mrna1;Target=FBgn0029648.1 1 46 +
ChrX	stalkie_big_nohaplotig	exon	79943556	79943675	100	+	.	Parent=FBgn0029648.1.mrna1;Target=FBgn0029648.1 47 166 +
ChrX	stalkie_big_nohaplotig	exon	79943739	79944322	100	+	.	Parent=FBgn0029648.1.mrna1;Target=FBgn0029648.1 167 750 +
ChrX	stalkie_big_nohaplotig	CDS	79943431	79943476	.	+	0	Parent=FBgn0029648.1.mrna1;Target=FBgn0029648.1 1 46 +
ChrX	stalkie_big_nohaplotig	CDS	79943556	79943675	.	+	2	Parent=FBgn0029648.1.mrna1;Target=FBgn0029648.1 47 166 +
ChrX	stalkie_big_nohaplotig	CDS	79943739	79944322	.	+	2	Parent=FBgn0029648.1.mrna1;Target=FBgn0029648.1 167 750 +
ChrX	gffcl	locus	79948143	79948336	.	+	.	ID=RLOC_00004384;geneIDs=comp1025302_c0_seq1.path1;transcripts=comp1025302_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79948143	79948336	.	+	.	ID=comp1025302_c0_seq1.mrna1;geneID=comp1025302_c0_seq1.path1;Name=comp1025302_c0_seq1;Dir=indeterminatecoverage=95.1;identity=100.0;matches=194;mismatches=0;indels=0;unknowns=0;Target=comp1025302_c0_seq1 197 4 .;CDS_Target=comp1025302_c0_seq1 56 6 .;locus=RLOC_00004384
ChrX	stalkie_big_nohaplotig	exon	79948143	79948336	100	+	.	Parent=comp1025302_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	79948145	79948195	.	+	0	Parent=comp1025302_c0_seq1.mrna1
ChrX	gffcl	locus	79950163	79961566	.	-	.	ID=RLOC_00004385;geneIDs=FBgn0250786.1.path1;transcripts=FBgn0250786.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79950163	79961566	.	-	.	ID=FBgn0250786.1.mrna1;geneID=FBgn0250786.1.path1;Name=FBgn0250786.1;Dir=sensecoverage=100.0;identity=100.0;matches=5829;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004385
ChrX	stalkie_big_nohaplotig	exon	79950163	79950379	100	-	.	Parent=FBgn0250786.1.mrna1;Target=FBgn0250786.1 5613 5829 +
ChrX	stalkie_big_nohaplotig	exon	79950492	79950617	100	-	.	Parent=FBgn0250786.1.mrna1;Target=FBgn0250786.1 5487 5612 +
ChrX	stalkie_big_nohaplotig	exon	79950678	79950803	100	-	.	Parent=FBgn0250786.1.mrna1;Target=FBgn0250786.1 5361 5486 +
ChrX	stalkie_big_nohaplotig	exon	79951498	79951933	100	-	.	Parent=FBgn0250786.1.mrna1;Target=FBgn0250786.1 4925 5360 +
ChrX	stalkie_big_nohaplotig	exon	79952003	79954829	100	-	.	Parent=FBgn0250786.1.mrna1;Target=FBgn0250786.1 2098 4924 +
ChrX	stalkie_big_nohaplotig	exon	79955781	79956888	100	-	.	Parent=FBgn0250786.1.mrna1;Target=FBgn0250786.1 990 2097 +
ChrX	stalkie_big_nohaplotig	exon	79957028	79957168	100	-	.	Parent=FBgn0250786.1.mrna1;Target=FBgn0250786.1 849 989 +
ChrX	stalkie_big_nohaplotig	exon	79957228	79957334	100	-	.	Parent=FBgn0250786.1.mrna1;Target=FBgn0250786.1 742 848 +
ChrX	stalkie_big_nohaplotig	exon	79957707	79958423	100	-	.	Parent=FBgn0250786.1.mrna1;Target=FBgn0250786.1 25 741 +
ChrX	stalkie_big_nohaplotig	exon	79961543	79961566	100	-	.	Parent=FBgn0250786.1.mrna1;Target=FBgn0250786.1 1 24 +
ChrX	stalkie_big_nohaplotig	CDS	79950163	79950379	.	-	1	Parent=FBgn0250786.1.mrna1;Target=FBgn0250786.1 5613 5829 +
ChrX	stalkie_big_nohaplotig	CDS	79950492	79950617	.	-	1	Parent=FBgn0250786.1.mrna1;Target=FBgn0250786.1 5487 5612 +
ChrX	stalkie_big_nohaplotig	CDS	79950678	79950803	.	-	1	Parent=FBgn0250786.1.mrna1;Target=FBgn0250786.1 5361 5486 +
ChrX	stalkie_big_nohaplotig	CDS	79951498	79951933	.	-	2	Parent=FBgn0250786.1.mrna1;Target=FBgn0250786.1 4925 5360 +
ChrX	stalkie_big_nohaplotig	CDS	79952003	79954829	.	-	0	Parent=FBgn0250786.1.mrna1;Target=FBgn0250786.1 2098 4924 +
ChrX	stalkie_big_nohaplotig	CDS	79955781	79956888	.	-	1	Parent=FBgn0250786.1.mrna1;Target=FBgn0250786.1 990 2097 +
ChrX	stalkie_big_nohaplotig	CDS	79957028	79957168	.	-	1	Parent=FBgn0250786.1.mrna1;Target=FBgn0250786.1 849 989 +
ChrX	stalkie_big_nohaplotig	CDS	79957228	79957334	.	-	0	Parent=FBgn0250786.1.mrna1;Target=FBgn0250786.1 742 848 +
ChrX	stalkie_big_nohaplotig	CDS	79957707	79958423	.	-	0	Parent=FBgn0250786.1.mrna1;Target=FBgn0250786.1 25 741 +
ChrX	stalkie_big_nohaplotig	CDS	79961543	79961566	.	-	0	Parent=FBgn0250786.1.mrna1;Target=FBgn0250786.1 1 24 +
ChrX	gffcl	locus	79972363	79975118	.	+	.	ID=RLOC_00004386;geneIDs=FBgn0002989.1.path1;transcripts=FBgn0002989.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79972363	79975118	.	+	.	ID=FBgn0002989.1.mrna1;geneID=FBgn0002989.1.path1;Name=FBgn0002989.1;Dir=sensecoverage=99.8;identity=100.0;matches=2308;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004386
ChrX	stalkie_big_nohaplotig	exon	79972363	79973203	100	+	.	Parent=FBgn0002989.1.mrna1;Target=FBgn0002989.1 6 846 +
ChrX	stalkie_big_nohaplotig	exon	79973258	79973681	100	+	.	Parent=FBgn0002989.1.mrna1;Target=FBgn0002989.1 847 1270 +
ChrX	stalkie_big_nohaplotig	exon	79973752	79973905	100	+	.	Parent=FBgn0002989.1.mrna1;Target=FBgn0002989.1 1271 1424 +
ChrX	stalkie_big_nohaplotig	exon	79974049	79974192	100	+	.	Parent=FBgn0002989.1.mrna1;Target=FBgn0002989.1 1425 1568 +
ChrX	stalkie_big_nohaplotig	exon	79974244	79974505	100	+	.	Parent=FBgn0002989.1.mrna1;Target=FBgn0002989.1 1569 1830 +
ChrX	stalkie_big_nohaplotig	exon	79974571	79974734	100	+	.	Parent=FBgn0002989.1.mrna1;Target=FBgn0002989.1 1831 1994 +
ChrX	stalkie_big_nohaplotig	exon	79974800	79975118	100	+	.	Parent=FBgn0002989.1.mrna1;Target=FBgn0002989.1 1995 2313 +
ChrX	stalkie_big_nohaplotig	CDS	79972364	79973203	.	+	0	Parent=FBgn0002989.1.mrna1;Target=FBgn0002989.1 7 846 +
ChrX	stalkie_big_nohaplotig	CDS	79973258	79973681	.	+	0	Parent=FBgn0002989.1.mrna1;Target=FBgn0002989.1 847 1270 +
ChrX	stalkie_big_nohaplotig	CDS	79973752	79973905	.	+	2	Parent=FBgn0002989.1.mrna1;Target=FBgn0002989.1 1271 1424 +
ChrX	stalkie_big_nohaplotig	CDS	79974049	79974192	.	+	1	Parent=FBgn0002989.1.mrna1;Target=FBgn0002989.1 1425 1568 +
ChrX	stalkie_big_nohaplotig	CDS	79974244	79974505	.	+	1	Parent=FBgn0002989.1.mrna1;Target=FBgn0002989.1 1569 1830 +
ChrX	stalkie_big_nohaplotig	CDS	79974571	79974734	.	+	0	Parent=FBgn0002989.1.mrna1;Target=FBgn0002989.1 1831 1994 +
ChrX	stalkie_big_nohaplotig	CDS	79974800	79975118	.	+	1	Parent=FBgn0002989.1.mrna1;Target=FBgn0002989.1 1995 2313 +
ChrX	gffcl	locus	79975447	79976599	.	+	.	ID=RLOC_00004387;geneIDs=ORF1446.path1;transcripts=ORF1446.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79975447	79976599	.	+	.	ID=ORF1446.mrna1;geneID=ORF1446.path1;Name=ORF1446;Dir=sensecoverage=100.0;identity=100.0;matches=1101;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004387
ChrX	stalkie_big_nohaplotig	exon	79975447	79975764	100	+	.	Parent=ORF1446.mrna1;Target=ORF1446 1 318 +
ChrX	stalkie_big_nohaplotig	exon	79975817	79976599	100	+	.	Parent=ORF1446.mrna1;Target=ORF1446 319 1101 +
ChrX	stalkie_big_nohaplotig	CDS	79975447	79975764	.	+	0	Parent=ORF1446.mrna1;Target=ORF1446 1 318 +
ChrX	stalkie_big_nohaplotig	CDS	79975817	79976599	.	+	0	Parent=ORF1446.mrna1;Target=ORF1446 319 1101 +
ChrX	gffcl	locus	79981301	79990036	.	-	.	ID=RLOC_00004388;geneIDs=FBgn0025109.1.path1;transcripts=FBgn0025109.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79981301	79990036	.	-	.	ID=FBgn0025109.1.mrna1;geneID=FBgn0025109.1.path1;Name=FBgn0025109.1;Dir=sensecoverage=100.0;identity=100.0;matches=1089;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004388
ChrX	stalkie_big_nohaplotig	exon	79981301	79981406	100	-	.	Parent=FBgn0025109.1.mrna1;Target=FBgn0025109.1 984 1089 +
ChrX	stalkie_big_nohaplotig	exon	79983059	79983237	100	-	.	Parent=FBgn0025109.1.mrna1;Target=FBgn0025109.1 805 983 +
ChrX	stalkie_big_nohaplotig	exon	79989177	79989760	100	-	.	Parent=FBgn0025109.1.mrna1;Target=FBgn0025109.1 221 804 +
ChrX	stalkie_big_nohaplotig	exon	79989817	79990036	100	-	.	Parent=FBgn0025109.1.mrna1;Target=FBgn0025109.1 1 220 +
ChrX	stalkie_big_nohaplotig	CDS	79981301	79981406	.	-	1	Parent=FBgn0025109.1.mrna1;Target=FBgn0025109.1 984 1089 +
ChrX	stalkie_big_nohaplotig	CDS	79983059	79983237	.	-	0	Parent=FBgn0025109.1.mrna1;Target=FBgn0025109.1 805 983 +
ChrX	stalkie_big_nohaplotig	CDS	79989177	79989760	.	-	2	Parent=FBgn0025109.1.mrna1;Target=FBgn0025109.1 221 804 +
ChrX	stalkie_big_nohaplotig	CDS	79989817	79990036	.	-	0	Parent=FBgn0025109.1.mrna1;Target=FBgn0025109.1 1 220 +
ChrX	gffcl	locus	79994178	80013941	.	+	.	ID=RLOC_00004389;geneIDs=FBgn0032480.1.path1;transcripts=FBgn0032480.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	79994178	80013941	.	+	.	ID=FBgn0032480.1.mrna1;geneID=FBgn0032480.1.path1;Name=FBgn0032480.1;Dir=sensecoverage=100.0;identity=100.0;matches=2697;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004389
ChrX	stalkie_big_nohaplotig	exon	79994178	79994560	100	+	.	Parent=FBgn0032480.1.mrna1;Target=FBgn0032480.1 1 383 +
ChrX	stalkie_big_nohaplotig	exon	80000836	80000982	100	+	.	Parent=FBgn0032480.1.mrna1;Target=FBgn0032480.1 384 530 +
ChrX	stalkie_big_nohaplotig	exon	80010626	80011044	100	+	.	Parent=FBgn0032480.1.mrna1;Target=FBgn0032480.1 531 949 +
ChrX	stalkie_big_nohaplotig	exon	80011107	80011901	100	+	.	Parent=FBgn0032480.1.mrna1;Target=FBgn0032480.1 950 1744 +
ChrX	stalkie_big_nohaplotig	exon	80011964	80012226	100	+	.	Parent=FBgn0032480.1.mrna1;Target=FBgn0032480.1 1745 2007 +
ChrX	stalkie_big_nohaplotig	exon	80012536	80012634	100	+	.	Parent=FBgn0032480.1.mrna1;Target=FBgn0032480.1 2008 2106 +
ChrX	stalkie_big_nohaplotig	exon	80013351	80013941	100	+	.	Parent=FBgn0032480.1.mrna1;Target=FBgn0032480.1 2107 2697 +
ChrX	stalkie_big_nohaplotig	CDS	79994178	79994560	.	+	0	Parent=FBgn0032480.1.mrna1;Target=FBgn0032480.1 1 383 +
ChrX	stalkie_big_nohaplotig	CDS	80000836	80000982	.	+	1	Parent=FBgn0032480.1.mrna1;Target=FBgn0032480.1 384 530 +
ChrX	stalkie_big_nohaplotig	CDS	80010626	80011044	.	+	1	Parent=FBgn0032480.1.mrna1;Target=FBgn0032480.1 531 949 +
ChrX	stalkie_big_nohaplotig	CDS	80011107	80011901	.	+	2	Parent=FBgn0032480.1.mrna1;Target=FBgn0032480.1 950 1744 +
ChrX	stalkie_big_nohaplotig	CDS	80011964	80012226	.	+	2	Parent=FBgn0032480.1.mrna1;Target=FBgn0032480.1 1745 2007 +
ChrX	stalkie_big_nohaplotig	CDS	80012536	80012634	.	+	0	Parent=FBgn0032480.1.mrna1;Target=FBgn0032480.1 2008 2106 +
ChrX	stalkie_big_nohaplotig	CDS	80013351	80013941	.	+	0	Parent=FBgn0032480.1.mrna1;Target=FBgn0032480.1 2107 2697 +
ChrX	gffcl	locus	80004038	80004811	.	+	.	ID=RLOC_00004390;geneIDs=ORF3051.path1;transcripts=ORF3051.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80004038	80004811	.	+	.	ID=ORF3051.mrna1;geneID=ORF3051.path1;Name=ORF3051;Dir=indeterminatecoverage=100.0;identity=100.0;matches=774;mismatches=0;indels=0;unknowns=0;Target=ORF3051 774 1 .;locus=RLOC_00004390
ChrX	stalkie_big_nohaplotig	exon	80004038	80004811	100	+	.	Parent=ORF3051.mrna1
ChrX	stalkie_big_nohaplotig	CDS	80004038	80004811	.	+	0	Parent=ORF3051.mrna1
ChrX	gffcl	locus	80015748	80016225	.	+	.	ID=RLOC_00004391;geneIDs=comp147660_c1_seq1.path1;transcripts=comp147660_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80015748	80016225	.	+	.	ID=comp147660_c1_seq1.mrna1;geneID=comp147660_c1_seq1.path1;Name=comp147660_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=476;mismatches=2;indels=0;unknowns=0;Target=comp147660_c1_seq1 478 1 .;CDS_Target=comp147660_c1_seq1 105 1 .;locus=RLOC_00004391
ChrX	stalkie_big_nohaplotig	exon	80015748	80016225	99	+	.	Parent=comp147660_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	80015748	80015852	.	+	0	Parent=comp147660_c1_seq1.mrna1
ChrX	gffcl	locus	80016674	80017109	.	+	.	ID=RLOC_00004392;geneIDs=comp143380_c0_seq1.path1;transcripts=comp143380_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80016674	80017109	.	+	.	ID=comp143380_c0_seq1.mrna1;geneID=comp143380_c0_seq1.path1;Name=comp143380_c0_seq1;Dir=indeterminatecoverage=64.0;identity=100.0;matches=436;mismatches=0;indels=0;unknowns=0;Target=comp143380_c0_seq1 675 240 .;CDS_Target=comp143380_c0_seq1 479 381 .;locus=RLOC_00004392
ChrX	stalkie_big_nohaplotig	exon	80016674	80017109	100	+	.	Parent=comp143380_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	80016815	80016913	.	+	0	Parent=comp143380_c0_seq1.mrna1
ChrX	gffcl	locus	80017418	80017799	.	-	.	ID=RLOC_00004393;geneIDs=comp144199_c0_seq1.path1;transcripts=comp144199_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80017418	80017799	.	-	.	ID=comp144199_c0_seq1.mrna1;geneID=comp144199_c0_seq1.path1;Name=comp144199_c0_seq1;Dir=indeterminatecoverage=85.5;identity=99.7;matches=381;mismatches=1;indels=0;unknowns=0;Target=comp144199_c0_seq1 382 1 .;CDS_Target=comp144199_c0_seq1 207 115 .;locus=RLOC_00004393
ChrX	stalkie_big_nohaplotig	exon	80017418	80017799	99	-	.	Parent=comp144199_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	80017593	80017685	.	-	0	Parent=comp144199_c0_seq1.mrna1
ChrX	gffcl	locus	80020101	80020440	.	-	.	ID=RLOC_00004394;geneIDs=comp145631_c0_seq1.path1;transcripts=comp145631_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80020101	80020440	.	-	.	ID=comp145631_c0_seq1.mrna1;geneID=comp145631_c0_seq1.path1;Name=comp145631_c0_seq1;Dir=indeterminatecoverage=89.7;identity=99.7;matches=339;mismatches=1;indels=0;unknowns=0;Target=comp145631_c0_seq1 365 26 .;CDS_Target=comp145631_c0_seq1 345 292 .;locus=RLOC_00004394
ChrX	stalkie_big_nohaplotig	exon	80020101	80020440	99	-	.	Parent=comp145631_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	80020121	80020174	.	-	0	Parent=comp145631_c0_seq1.mrna1
ChrX	gffcl	locus	80020737	80021369	.	+	.	ID=RLOC_00004395;geneIDs=comp143445_c0_seq1.path1;transcripts=comp143445_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80020737	80021369	.	+	.	ID=comp143445_c0_seq1.mrna1;geneID=comp143445_c0_seq1.path1;Name=comp143445_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=632;mismatches=1;indels=0;unknowns=0;Target=comp143445_c0_seq1 633 1 .;CDS_Target=comp143445_c0_seq1 440 351 .;locus=RLOC_00004395
ChrX	stalkie_big_nohaplotig	exon	80020737	80021369	99	+	.	Parent=comp143445_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	80021087	80021176	.	+	0	Parent=comp143445_c0_seq1.mrna1
ChrX	gffcl	locus	80021520	80022683	.	-	.	ID=RLOC_00004396;geneIDs=comp113075_c0_seq1.path1,comp143911_c0_seq1.path1;transcripts=comp143911_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80021933	80022683	.	-	.	ID=comp143911_c0_seq1.mrna1;geneID=comp143911_c0_seq1.path1;Name=comp143911_c0_seq1;Dir=indeterminatecoverage=99.3;identity=100.0;matches=751;mismatches=0;indels=0;unknowns=0;Target=comp143911_c0_seq1 756 6 .;CDS_Target=comp143911_c0_seq1 258 7 .;locus=RLOC_00004396
ChrX	stalkie_big_nohaplotig	exon	80021933	80022683	100	-	.	Parent=comp143911_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	80022431	80022682	.	-	0	Parent=comp143911_c0_seq1.mrna1
ChrX	gffcl	locus	80023259	80023879	.	-	.	ID=RLOC_00004397;geneIDs=comp142533_c0_seq1.path1;transcripts=comp142533_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80023259	80023879	.	-	.	ID=comp142533_c0_seq1.mrna1;geneID=comp142533_c0_seq1.path1;Name=comp142533_c0_seq1;Dir=indeterminatecoverage=93.7;identity=99.8;matches=621;mismatches=0;indels=1;unknowns=0;Target=comp142533_c0_seq1 663 42 .;CDS_Target=comp142533_c0_seq1 511 446 .;locus=RLOC_00004397
ChrX	stalkie_big_nohaplotig	exon	80023259	80023879	99	-	.	Parent=comp142533_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	80023411	80023475	.	-	0	Parent=comp142533_c0_seq1.mrna1
ChrX	gffcl	locus	80025470	80031992	.	-	.	ID=RLOC_00004398;geneIDs=FBgn0032481.1.path1;transcripts=FBgn0032481.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80025470	80031992	.	-	.	ID=FBgn0032481.1.mrna1;geneID=FBgn0032481.1.path1;Name=FBgn0032481.1;Dir=sensecoverage=100.0;identity=100.0;matches=4523;mismatches=0;indels=1;unknowns=0;locus=RLOC_00004398
ChrX	stalkie_big_nohaplotig	exon	80025470	80025996	100	-	.	Parent=FBgn0032481.1.mrna1;Target=FBgn0032481.1 3998 4524 +
ChrX	stalkie_big_nohaplotig	exon	80026058	80026254	100	-	.	Parent=FBgn0032481.1.mrna1;Target=FBgn0032481.1 3801 3997 +
ChrX	stalkie_big_nohaplotig	exon	80027214	80027415	100	-	.	Parent=FBgn0032481.1.mrna1;Target=FBgn0032481.1 3599 3800 +
ChrX	stalkie_big_nohaplotig	exon	80027471	80029329	100	-	.	Parent=FBgn0032481.1.mrna1;Target=FBgn0032481.1 1740 3598 +
ChrX	stalkie_big_nohaplotig	exon	80029398	80030655	100	-	.	Parent=FBgn0032481.1.mrna1;Target=FBgn0032481.1 482 1739 +
ChrX	stalkie_big_nohaplotig	exon	80031409	80031862	99	-	.	Parent=FBgn0032481.1.mrna1;Target=FBgn0032481.1 27 481 +
ChrX	stalkie_big_nohaplotig	exon	80031967	80031992	100	-	.	Parent=FBgn0032481.1.mrna1;Target=FBgn0032481.1 1 26 +
ChrX	stalkie_big_nohaplotig	CDS	80031756	80031862	.	-	0	Parent=FBgn0032481.1.mrna1;Target=FBgn0032481.1 27 134 +
ChrX	stalkie_big_nohaplotig	CDS	80031967	80031990	.	-	0	Parent=FBgn0032481.1.mrna1;Target=FBgn0032481.1 3 26 +
ChrX	gffcl	locus	80035433	80037131	.	-	.	ID=RLOC_00004399;geneIDs=FBgn0032781.2.path1;transcripts=FBgn0032781.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80035433	80037131	.	-	.	ID=FBgn0032781.2.mrna1;geneID=FBgn0032781.2.path1;Name=FBgn0032781.2;Dir=sensecoverage=100.0;identity=100.0;matches=1527;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004399
ChrX	stalkie_big_nohaplotig	exon	80035433	80035657	100	-	.	Parent=FBgn0032781.2.mrna1;Target=FBgn0032781.2 1303 1527 +
ChrX	stalkie_big_nohaplotig	exon	80035717	80035881	100	-	.	Parent=FBgn0032781.2.mrna1;Target=FBgn0032781.2 1138 1302 +
ChrX	stalkie_big_nohaplotig	exon	80035936	80036730	100	-	.	Parent=FBgn0032781.2.mrna1;Target=FBgn0032781.2 343 1137 +
ChrX	stalkie_big_nohaplotig	exon	80036790	80037131	100	-	.	Parent=FBgn0032781.2.mrna1;Target=FBgn0032781.2 1 342 +
ChrX	stalkie_big_nohaplotig	CDS	80035433	80035657	.	-	0	Parent=FBgn0032781.2.mrna1;Target=FBgn0032781.2 1303 1527 +
ChrX	stalkie_big_nohaplotig	CDS	80035717	80035881	.	-	0	Parent=FBgn0032781.2.mrna1;Target=FBgn0032781.2 1138 1302 +
ChrX	stalkie_big_nohaplotig	CDS	80035936	80036730	.	-	0	Parent=FBgn0032781.2.mrna1;Target=FBgn0032781.2 343 1137 +
ChrX	stalkie_big_nohaplotig	CDS	80036790	80037131	.	-	0	Parent=FBgn0032781.2.mrna1;Target=FBgn0032781.2 1 342 +
ChrX	gffcl	locus	80038677	80039653	.	+	.	ID=RLOC_00004400;geneIDs=FBgn0032781.1.path1;transcripts=FBgn0032781.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80038677	80039653	.	+	.	ID=FBgn0032781.1.mrna1;geneID=FBgn0032781.1.path1;Name=FBgn0032781.1;Dir=sensecoverage=100.0;identity=100.0;matches=915;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004400
ChrX	stalkie_big_nohaplotig	exon	80038677	80039021	100	+	.	Parent=FBgn0032781.1.mrna1;Target=FBgn0032781.1 1 345 +
ChrX	stalkie_big_nohaplotig	exon	80039084	80039653	100	+	.	Parent=FBgn0032781.1.mrna1;Target=FBgn0032781.1 346 915 +
ChrX	stalkie_big_nohaplotig	CDS	80038677	80039021	.	+	0	Parent=FBgn0032781.1.mrna1;Target=FBgn0032781.1 1 345 +
ChrX	stalkie_big_nohaplotig	CDS	80039084	80039653	.	+	0	Parent=FBgn0032781.1.mrna1;Target=FBgn0032781.1 346 915 +
ChrX	gffcl	locus	80047287	80047912	.	+	.	ID=RLOC_00004401;geneIDs=comp136940_c0_seq1.path1;transcripts=comp136940_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80047287	80047912	.	+	.	ID=comp136940_c0_seq1.mrna1;geneID=comp136940_c0_seq1.path1;Name=comp136940_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.7;matches=624;mismatches=0;indels=2;unknowns=0;Target=comp136940_c0_seq1 624 1 .;CDS_Target=comp136940_c0_seq1 602 489 .;locus=RLOC_00004401
ChrX	stalkie_big_nohaplotig	exon	80047287	80047912	99	+	.	Parent=comp136940_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	80047777	80047890	.	+	0	Parent=comp136940_c0_seq1.mrna1
ChrX	gffcl	locus	80047962	80048281	.	+	.	ID=RLOC_00004402;geneIDs=comp79809_c0_seq1.path1;transcripts=comp79809_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80047962	80048281	.	+	.	ID=comp79809_c0_seq1.mrna1;geneID=comp79809_c0_seq1.path1;Name=comp79809_c0_seq1;Dir=indeterminatecoverage=96.4;identity=100.0;matches=320;mismatches=0;indels=0;unknowns=0;Target=comp79809_c0_seq1 332 13 .;CDS_Target=comp79809_c0_seq1 283 185 .;locus=RLOC_00004402
ChrX	stalkie_big_nohaplotig	exon	80047962	80048281	100	+	.	Parent=comp79809_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	80048134	80048232	.	+	0	Parent=comp79809_c0_seq1.mrna1
ChrX	gffcl	locus	80049909	81977008	.	+	.	ID=RLOC_00004403;geneIDs=comp161328_c0_seq1.path1;transcripts=comp161328_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80049909	81977008	.	+	.	ID=comp161328_c0_seq1.mrna1;geneID=comp161328_c0_seq1.path1;Name=comp161328_c0_seq1;Dir=indeterminatecoverage=63.3;identity=99.1;matches=1302;mismatches=3;indels=9;unknowns=0;Target=comp161328_c0_seq1 670 563 .;locus=RLOC_00004403
ChrX	stalkie_big_nohaplotig	exon	80049909	80051147	100	+	.	Parent=comp161328_c0_seq1.mrna1;Target=comp161328_c0_seq1 1239 1 .
ChrX	stalkie_big_nohaplotig	exon	81950830	81950846	94	+	.	Parent=comp161328_c0_seq1.mrna1;Target=comp161328_c0_seq1 1256 1240 .
ChrX	stalkie_big_nohaplotig	exon	81958333	81958334	100	+	.	Parent=comp161328_c0_seq1.mrna1;Target=comp161328_c0_seq1 1258 1257 .
ChrX	stalkie_big_nohaplotig	exon	81958898	81958901	100	+	.	Parent=comp161328_c0_seq1.mrna1;Target=comp161328_c0_seq1 1262 1259 .
ChrX	stalkie_big_nohaplotig	exon	81960897	81960898	100	+	.	Parent=comp161328_c0_seq1.mrna1;Target=comp161328_c0_seq1 1264 1263 .
ChrX	stalkie_big_nohaplotig	exon	81964531	81964540	100	+	.	Parent=comp161328_c0_seq1.mrna1;Target=comp161328_c0_seq1 1274 1265 .
ChrX	stalkie_big_nohaplotig	exon	81974244	81974254	100	+	.	Parent=comp161328_c0_seq1.mrna1;Target=comp161328_c0_seq1 1285 1275 .
ChrX	stalkie_big_nohaplotig	exon	81976745	81976765	47	+	.	Parent=comp161328_c0_seq1.mrna1;Target=comp161328_c0_seq1 1297 1286 .
ChrX	stalkie_big_nohaplotig	exon	81977001	81977008	100	+	.	Parent=comp161328_c0_seq1.mrna1;Target=comp161328_c0_seq1 1321 1314 .
ChrX	stalkie_big_nohaplotig	CDS	80050471	80050578	.	+	0	Parent=comp161328_c0_seq1.mrna1
ChrX	gffcl	locus	80051807	80061594	.	-	.	ID=RLOC_00004404;geneIDs=FBgn0051641.1.path1;transcripts=FBgn0051641.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80051807	80061594	.	-	.	ID=FBgn0051641.1.mrna1;geneID=FBgn0051641.1.path1;Name=FBgn0051641.1;Dir=sensecoverage=80.8;identity=100.0;matches=742;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004404
ChrX	stalkie_big_nohaplotig	exon	80051807	80051893	100	-	.	Parent=FBgn0051641.1.mrna1;Target=FBgn0051641.1 832 918 +
ChrX	stalkie_big_nohaplotig	exon	80056859	80057014	100	-	.	Parent=FBgn0051641.1.mrna1;Target=FBgn0051641.1 676 831 +
ChrX	stalkie_big_nohaplotig	exon	80059260	80059406	100	-	.	Parent=FBgn0051641.1.mrna1;Target=FBgn0051641.1 529 675 +
ChrX	stalkie_big_nohaplotig	exon	80059501	80059686	100	-	.	Parent=FBgn0051641.1.mrna1;Target=FBgn0051641.1 343 528 +
ChrX	stalkie_big_nohaplotig	exon	80061429	80061594	100	-	.	Parent=FBgn0051641.1.mrna1;Target=FBgn0051641.1 177 342 +
ChrX	stalkie_big_nohaplotig	CDS	80051807	80051893	.	-	0	Parent=FBgn0051641.1.mrna1;Target=FBgn0051641.1 832 918 +
ChrX	stalkie_big_nohaplotig	CDS	80056859	80057014	.	-	0	Parent=FBgn0051641.1.mrna1;Target=FBgn0051641.1 676 831 +
ChrX	stalkie_big_nohaplotig	CDS	80059260	80059406	.	-	0	Parent=FBgn0051641.1.mrna1;Target=FBgn0051641.1 529 675 +
ChrX	stalkie_big_nohaplotig	CDS	80059501	80059686	.	-	0	Parent=FBgn0051641.1.mrna1;Target=FBgn0051641.1 343 528 +
ChrX	stalkie_big_nohaplotig	CDS	80061429	80061593	.	-	0	Parent=FBgn0051641.1.mrna1;Target=FBgn0051641.1 178 342 +
ChrX	gffcl	locus	80193008	80202471	.	-	.	ID=RLOC_00004405;geneIDs=FBgn0025454.1.path1,comp163152_c0_seq1.path1;transcripts=comp163152_c0_seq1.mrna1,FBgn0025454.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80193008	80202471	.	-	.	ID=comp163152_c0_seq1.mrna1;geneID=comp163152_c0_seq1.path1;Name=comp163152_c0_seq1;Dir=antisensecoverage=76.5;identity=97.6;matches=1759;mismatches=36;indels=8;unknowns=0;locus=RLOC_00004405
ChrX	stalkie_big_nohaplotig	exon	80193008	80193537	96	-	.	Parent=comp163152_c0_seq1.mrna1;Target=comp163152_c0_seq1 16 551 -
ChrX	stalkie_big_nohaplotig	exon	80193598	80194295	98	-	.	Parent=comp163152_c0_seq1.mrna1;Target=comp163152_c0_seq1 552 1247 -
ChrX	stalkie_big_nohaplotig	exon	80201833	80201931	93	-	.	Parent=comp163152_c0_seq1.mrna1;Target=comp163152_c0_seq1 1248 1346 -
ChrX	stalkie_big_nohaplotig	exon	80202002	80202471	98	-	.	Parent=comp163152_c0_seq1.mrna1;Target=comp163152_c0_seq1 1347 1816 -
ChrX	stalkie_big_nohaplotig	CDS	80193229	80193537	.	-	0	Parent=comp163152_c0_seq1.mrna1;Target=comp163152_c0_seq1 243 551 .
ChrX	stalkie_big_nohaplotig	CDS	80193598	80194212	.	-	0	Parent=comp163152_c0_seq1.mrna1;Target=comp163152_c0_seq1 552 1166 .
ChrX	stalkie_big_nohaplotig	mRNA	80193232	80196131	.	-	.	ID=FBgn0025454.1.mrna1;geneID=FBgn0025454.1.path1;Name=FBgn0025454.1;Dir=sensecoverage=100.0;identity=98.6;matches=1597;mismatches=23;indels=0;unknowns=0;locus=RLOC_00004405
ChrX	stalkie_big_nohaplotig	exon	80193232	80193537	98	-	.	Parent=FBgn0025454.1.mrna1;Target=FBgn0025454.1 1315 1620 +
ChrX	stalkie_big_nohaplotig	exon	80193598	80194392	97	-	.	Parent=FBgn0025454.1.mrna1;Target=FBgn0025454.1 520 1314 +
ChrX	stalkie_big_nohaplotig	exon	80194463	80194932	99	-	.	Parent=FBgn0025454.1.mrna1;Target=FBgn0025454.1 50 519 +
ChrX	stalkie_big_nohaplotig	exon	80196083	80196131	100	-	.	Parent=FBgn0025454.1.mrna1;Target=FBgn0025454.1 1 49 +
ChrX	stalkie_big_nohaplotig	CDS	80193232	80193537	.	-	0	Parent=FBgn0025454.1.mrna1;Target=FBgn0025454.1 1315 1620 +
ChrX	stalkie_big_nohaplotig	CDS	80193598	80194392	.	-	0	Parent=FBgn0025454.1.mrna1;Target=FBgn0025454.1 520 1314 +
ChrX	stalkie_big_nohaplotig	CDS	80194463	80194932	.	-	2	Parent=FBgn0025454.1.mrna1;Target=FBgn0025454.1 50 519 +
ChrX	stalkie_big_nohaplotig	CDS	80196083	80196131	.	-	0	Parent=FBgn0025454.1.mrna1;Target=FBgn0025454.1 1 49 +
ChrX	gffcl	locus	80302131	80303747	.	-	.	ID=RLOC_00004406;geneIDs=comp147433_c0_seq1.path1;transcripts=comp147433_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80302131	80303747	.	-	.	ID=comp147433_c0_seq1.mrna1;geneID=comp147433_c0_seq1.path1;Name=comp147433_c0_seq1;Dir=antisensecoverage=100.0;identity=98.2;matches=533;mismatches=5;indels=5;unknowns=0;Target=comp147433_c0_seq1 421 543 .;locus=RLOC_00004406
ChrX	stalkie_big_nohaplotig	exon	80302131	80302544	97	-	.	Parent=comp147433_c0_seq1.mrna1;Target=comp147433_c0_seq1 1 419 -
ChrX	stalkie_big_nohaplotig	exon	80303624	80303747	100	-	.	Parent=comp147433_c0_seq1.mrna1;Target=comp147433_c0_seq1 420 543 -
ChrX	stalkie_big_nohaplotig	CDS	80303625	80303747	.	-	0	Parent=comp147433_c0_seq1.mrna1
ChrX	gffcl	locus	80355345	80360257	.	+	.	ID=RLOC_00004407;geneIDs=FBgn0031779.1.path1;transcripts=FBgn0031779.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80355345	80360257	.	+	.	ID=FBgn0031779.1.mrna1;geneID=FBgn0031779.1.path1;Name=FBgn0031779.1;Dir=sensecoverage=100.0;identity=100.0;matches=1368;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004407
ChrX	stalkie_big_nohaplotig	exon	80355345	80355515	100	+	.	Parent=FBgn0031779.1.mrna1;Target=FBgn0031779.1 1 171 +
ChrX	stalkie_big_nohaplotig	exon	80355582	80356117	100	+	.	Parent=FBgn0031779.1.mrna1;Target=FBgn0031779.1 172 707 +
ChrX	stalkie_big_nohaplotig	exon	80357262	80357676	100	+	.	Parent=FBgn0031779.1.mrna1;Target=FBgn0031779.1 708 1122 +
ChrX	stalkie_big_nohaplotig	exon	80357820	80357982	100	+	.	Parent=FBgn0031779.1.mrna1;Target=FBgn0031779.1 1123 1285 +
ChrX	stalkie_big_nohaplotig	exon	80360175	80360257	100	+	.	Parent=FBgn0031779.1.mrna1;Target=FBgn0031779.1 1286 1368 +
ChrX	stalkie_big_nohaplotig	CDS	80355345	80355515	.	+	0	Parent=FBgn0031779.1.mrna1;Target=FBgn0031779.1 1 171 +
ChrX	stalkie_big_nohaplotig	CDS	80355582	80356117	.	+	0	Parent=FBgn0031779.1.mrna1;Target=FBgn0031779.1 172 707 +
ChrX	stalkie_big_nohaplotig	CDS	80357262	80357676	.	+	1	Parent=FBgn0031779.1.mrna1;Target=FBgn0031779.1 708 1122 +
ChrX	stalkie_big_nohaplotig	CDS	80357820	80357982	.	+	0	Parent=FBgn0031779.1.mrna1;Target=FBgn0031779.1 1123 1285 +
ChrX	stalkie_big_nohaplotig	CDS	80360175	80360257	.	+	2	Parent=FBgn0031779.1.mrna1;Target=FBgn0031779.1 1286 1368 +
ChrX	gffcl	locus	80363565	80366598	.	-	.	ID=RLOC_00004408;geneIDs=FBgn0025640.1.path1;transcripts=FBgn0025640.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80363565	80366598	.	-	.	ID=FBgn0025640.1.mrna1;geneID=FBgn0025640.1.path1;Name=FBgn0025640.1;Dir=sensecoverage=100.0;identity=100.0;matches=1101;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004408
ChrX	stalkie_big_nohaplotig	exon	80363565	80363946	100	-	.	Parent=FBgn0025640.1.mrna1;Target=FBgn0025640.1 720 1101 +
ChrX	stalkie_big_nohaplotig	exon	80364011	80364207	100	-	.	Parent=FBgn0025640.1.mrna1;Target=FBgn0025640.1 523 719 +
ChrX	stalkie_big_nohaplotig	exon	80364284	80364412	100	-	.	Parent=FBgn0025640.1.mrna1;Target=FBgn0025640.1 394 522 +
ChrX	stalkie_big_nohaplotig	exon	80364484	80364573	100	-	.	Parent=FBgn0025640.1.mrna1;Target=FBgn0025640.1 304 393 +
ChrX	stalkie_big_nohaplotig	exon	80364632	80364764	100	-	.	Parent=FBgn0025640.1.mrna1;Target=FBgn0025640.1 171 303 +
ChrX	stalkie_big_nohaplotig	exon	80364832	80364969	100	-	.	Parent=FBgn0025640.1.mrna1;Target=FBgn0025640.1 33 170 +
ChrX	stalkie_big_nohaplotig	exon	80366567	80366598	100	-	.	Parent=FBgn0025640.1.mrna1;Target=FBgn0025640.1 1 32 +
ChrX	stalkie_big_nohaplotig	CDS	80363565	80363946	.	-	1	Parent=FBgn0025640.1.mrna1;Target=FBgn0025640.1 720 1101 +
ChrX	stalkie_big_nohaplotig	CDS	80364011	80364207	.	-	0	Parent=FBgn0025640.1.mrna1;Target=FBgn0025640.1 523 719 +
ChrX	stalkie_big_nohaplotig	CDS	80364284	80364412	.	-	0	Parent=FBgn0025640.1.mrna1;Target=FBgn0025640.1 394 522 +
ChrX	stalkie_big_nohaplotig	CDS	80364484	80364573	.	-	0	Parent=FBgn0025640.1.mrna1;Target=FBgn0025640.1 304 393 +
ChrX	stalkie_big_nohaplotig	CDS	80364632	80364764	.	-	1	Parent=FBgn0025640.1.mrna1;Target=FBgn0025640.1 171 303 +
ChrX	stalkie_big_nohaplotig	CDS	80364832	80364969	.	-	1	Parent=FBgn0025640.1.mrna1;Target=FBgn0025640.1 33 170 +
ChrX	stalkie_big_nohaplotig	CDS	80366567	80366598	.	-	0	Parent=FBgn0025640.1.mrna1;Target=FBgn0025640.1 1 32 +
ChrX	gffcl	locus	80369889	80372782	.	+	.	ID=RLOC_00004409;geneIDs=FBgn0031740.1.path1;transcripts=FBgn0031740.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80369889	80372782	.	+	.	ID=FBgn0031740.1.mrna1;geneID=FBgn0031740.1.path1;Name=FBgn0031740.1;Dir=sensecoverage=100.0;identity=99.9;matches=839;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004409
ChrX	stalkie_big_nohaplotig	exon	80369889	80370175	100	+	.	Parent=FBgn0031740.1.mrna1;Target=FBgn0031740.1 1 287 +
ChrX	stalkie_big_nohaplotig	exon	80370236	80370476	100	+	.	Parent=FBgn0031740.1.mrna1;Target=FBgn0031740.1 288 528 +
ChrX	stalkie_big_nohaplotig	exon	80372471	80372782	99	+	.	Parent=FBgn0031740.1.mrna1;Target=FBgn0031740.1 529 840 +
ChrX	stalkie_big_nohaplotig	CDS	80369889	80370175	.	+	0	Parent=FBgn0031740.1.mrna1;Target=FBgn0031740.1 1 287 +
ChrX	stalkie_big_nohaplotig	CDS	80370236	80370476	.	+	1	Parent=FBgn0031740.1.mrna1;Target=FBgn0031740.1 288 528 +
ChrX	stalkie_big_nohaplotig	CDS	80372471	80372782	.	+	0	Parent=FBgn0031740.1.mrna1;Target=FBgn0031740.1 529 840 +
ChrX	gffcl	locus	80372853	80376411	.	-	.	ID=RLOC_00004410;geneIDs=comp158618_c0_seq1.path1;transcripts=comp158618_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80372853	80376411	.	-	.	ID=comp158618_c0_seq1.mrna1;geneID=comp158618_c0_seq1.path1;Name=comp158618_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.3;matches=3535;mismatches=0;indels=24;unknowns=0;Target=comp158618_c0_seq1 3535 1 .;CDS_Target=comp158618_c0_seq1 2678 2415 .;locus=RLOC_00004410
ChrX	stalkie_big_nohaplotig	exon	80372853	80376411	99	-	.	Parent=comp158618_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	80373734	80373997	.	-	0	Parent=comp158618_c0_seq1.mrna1
ChrX	gffcl	locus	80411213	80411465	.	-	.	ID=RLOC_00004411;geneIDs=comp856512_c0_seq1.path1;transcripts=comp856512_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80411213	80411465	.	-	.	ID=comp856512_c0_seq1.mrna1;geneID=comp856512_c0_seq1.path1;Name=comp856512_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.6;matches=253;mismatches=0;indels=1;unknowns=0;Target=comp856512_c0_seq1 257 4 .;CDS_Target=comp856512_c0_seq1 124 5 .;locus=RLOC_00004411
ChrX	stalkie_big_nohaplotig	exon	80411213	80411465	99	-	.	Parent=comp856512_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	80411345	80411464	.	-	0	Parent=comp856512_c0_seq1.mrna1
ChrX	gffcl	locus	80411983	80412381	.	-	.	ID=RLOC_00004412;geneIDs=comp90216_c0_seq1.path1;transcripts=comp90216_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80411983	80412381	.	-	.	ID=comp90216_c0_seq1.mrna1;geneID=comp90216_c0_seq1.path1;Name=comp90216_c0_seq1;Dir=indeterminatecoverage=94.1;identity=100.0;matches=399;mismatches=0;indels=0;unknowns=0;Target=comp90216_c0_seq1 399 1 .;CDS_Target=comp90216_c0_seq1 399 241 .;locus=RLOC_00004412
ChrX	stalkie_big_nohaplotig	exon	80411983	80412381	100	-	.	Parent=comp90216_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	80411983	80412141	.	-	0	Parent=comp90216_c0_seq1.mrna1
ChrX	gffcl	locus	80412425	80427964	.	+	.	ID=RLOC_00004413;geneIDs=FBgn0031741.1.path1;transcripts=FBgn0031741.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80412425	80427964	.	+	.	ID=FBgn0031741.1.mrna1;geneID=FBgn0031741.1.path1;Name=FBgn0031741.1;Dir=sensecoverage=100.0;identity=100.0;matches=2238;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004413
ChrX	stalkie_big_nohaplotig	exon	80412425	80412590	100	+	.	Parent=FBgn0031741.1.mrna1;Target=FBgn0031741.1 1 166 +
ChrX	stalkie_big_nohaplotig	exon	80419457	80419551	100	+	.	Parent=FBgn0031741.1.mrna1;Target=FBgn0031741.1 167 261 +
ChrX	stalkie_big_nohaplotig	exon	80419620	80419750	100	+	.	Parent=FBgn0031741.1.mrna1;Target=FBgn0031741.1 262 392 +
ChrX	stalkie_big_nohaplotig	exon	80419813	80420392	100	+	.	Parent=FBgn0031741.1.mrna1;Target=FBgn0031741.1 393 972 +
ChrX	stalkie_big_nohaplotig	exon	80420455	80420663	100	+	.	Parent=FBgn0031741.1.mrna1;Target=FBgn0031741.1 973 1181 +
ChrX	stalkie_big_nohaplotig	exon	80422470	80422668	100	+	.	Parent=FBgn0031741.1.mrna1;Target=FBgn0031741.1 1182 1380 +
ChrX	stalkie_big_nohaplotig	exon	80422722	80423259	100	+	.	Parent=FBgn0031741.1.mrna1;Target=FBgn0031741.1 1381 1918 +
ChrX	stalkie_big_nohaplotig	exon	80423319	80423530	100	+	.	Parent=FBgn0031741.1.mrna1;Target=FBgn0031741.1 1919 2130 +
ChrX	stalkie_big_nohaplotig	exon	80427857	80427964	100	+	.	Parent=FBgn0031741.1.mrna1;Target=FBgn0031741.1 2131 2238 +
ChrX	stalkie_big_nohaplotig	CDS	80412425	80412590	.	+	0	Parent=FBgn0031741.1.mrna1;Target=FBgn0031741.1 1 166 +
ChrX	stalkie_big_nohaplotig	CDS	80419457	80419551	.	+	2	Parent=FBgn0031741.1.mrna1;Target=FBgn0031741.1 167 261 +
ChrX	stalkie_big_nohaplotig	CDS	80419620	80419750	.	+	0	Parent=FBgn0031741.1.mrna1;Target=FBgn0031741.1 262 392 +
ChrX	stalkie_big_nohaplotig	CDS	80419813	80420392	.	+	1	Parent=FBgn0031741.1.mrna1;Target=FBgn0031741.1 393 972 +
ChrX	stalkie_big_nohaplotig	CDS	80420455	80420663	.	+	0	Parent=FBgn0031741.1.mrna1;Target=FBgn0031741.1 973 1181 +
ChrX	stalkie_big_nohaplotig	CDS	80422470	80422668	.	+	1	Parent=FBgn0031741.1.mrna1;Target=FBgn0031741.1 1182 1380 +
ChrX	stalkie_big_nohaplotig	CDS	80422722	80423259	.	+	0	Parent=FBgn0031741.1.mrna1;Target=FBgn0031741.1 1381 1918 +
ChrX	stalkie_big_nohaplotig	CDS	80423319	80423530	.	+	2	Parent=FBgn0031741.1.mrna1;Target=FBgn0031741.1 1919 2130 +
ChrX	stalkie_big_nohaplotig	CDS	80427857	80427964	.	+	0	Parent=FBgn0031741.1.mrna1;Target=FBgn0031741.1 2131 2238 +
ChrX	gffcl	locus	80428521	80446129	.	+	.	ID=RLOC_00004414;geneIDs=ORF1239.path1;transcripts=ORF1239.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80428521	80446129	.	+	.	ID=ORF1239.mrna1;geneID=ORF1239.path1;Name=ORF1239;Dir=sensecoverage=100.0;identity=99.8;matches=1168;mismatches=2;indels=0;unknowns=0;locus=RLOC_00004414
ChrX	stalkie_big_nohaplotig	exon	80428521	80428542	100	+	.	Parent=ORF1239.mrna1;Target=ORF1239 1 22 +
ChrX	stalkie_big_nohaplotig	exon	80431031	80431106	100	+	.	Parent=ORF1239.mrna1;Target=ORF1239 23 98 +
ChrX	stalkie_big_nohaplotig	exon	80432531	80432605	100	+	.	Parent=ORF1239.mrna1;Target=ORF1239 99 173 +
ChrX	stalkie_big_nohaplotig	exon	80432707	80432775	100	+	.	Parent=ORF1239.mrna1;Target=ORF1239 174 242 +
ChrX	stalkie_big_nohaplotig	exon	80434776	80434829	100	+	.	Parent=ORF1239.mrna1;Target=ORF1239 243 296 +
ChrX	stalkie_big_nohaplotig	exon	80434951	80435019	100	+	.	Parent=ORF1239.mrna1;Target=ORF1239 297 365 +
ChrX	stalkie_big_nohaplotig	exon	80435143	80435169	100	+	.	Parent=ORF1239.mrna1;Target=ORF1239 366 392 +
ChrX	stalkie_big_nohaplotig	exon	80435266	80435340	100	+	.	Parent=ORF1239.mrna1;Target=ORF1239 393 467 +
ChrX	stalkie_big_nohaplotig	exon	80436962	80437027	100	+	.	Parent=ORF1239.mrna1;Target=ORF1239 468 533 +
ChrX	stalkie_big_nohaplotig	exon	80437134	80437199	100	+	.	Parent=ORF1239.mrna1;Target=ORF1239 534 599 +
ChrX	stalkie_big_nohaplotig	exon	80438338	80438400	100	+	.	Parent=ORF1239.mrna1;Target=ORF1239 600 662 +
ChrX	stalkie_big_nohaplotig	exon	80441619	80441693	98	+	.	Parent=ORF1239.mrna1;Target=ORF1239 663 737 +
ChrX	stalkie_big_nohaplotig	exon	80442309	80442383	98	+	.	Parent=ORF1239.mrna1;Target=ORF1239 738 812 +
ChrX	stalkie_big_nohaplotig	exon	80442690	80442737	100	+	.	Parent=ORF1239.mrna1;Target=ORF1239 813 860 +
ChrX	stalkie_big_nohaplotig	exon	80443324	80443380	100	+	.	Parent=ORF1239.mrna1;Target=ORF1239 861 917 +
ChrX	stalkie_big_nohaplotig	exon	80445877	80446129	100	+	.	Parent=ORF1239.mrna1;Target=ORF1239 918 1170 +
ChrX	stalkie_big_nohaplotig	CDS	80428521	80428542	.	+	0	Parent=ORF1239.mrna1;Target=ORF1239 1 22 +
ChrX	stalkie_big_nohaplotig	CDS	80431031	80431106	.	+	2	Parent=ORF1239.mrna1;Target=ORF1239 23 98 +
ChrX	stalkie_big_nohaplotig	CDS	80432531	80432605	.	+	1	Parent=ORF1239.mrna1;Target=ORF1239 99 173 +
ChrX	stalkie_big_nohaplotig	CDS	80432707	80432775	.	+	1	Parent=ORF1239.mrna1;Target=ORF1239 174 242 +
ChrX	stalkie_big_nohaplotig	CDS	80434776	80434829	.	+	1	Parent=ORF1239.mrna1;Target=ORF1239 243 296 +
ChrX	stalkie_big_nohaplotig	CDS	80434951	80435019	.	+	1	Parent=ORF1239.mrna1;Target=ORF1239 297 365 +
ChrX	stalkie_big_nohaplotig	CDS	80435143	80435169	.	+	1	Parent=ORF1239.mrna1;Target=ORF1239 366 392 +
ChrX	stalkie_big_nohaplotig	CDS	80435266	80435340	.	+	1	Parent=ORF1239.mrna1;Target=ORF1239 393 467 +
ChrX	stalkie_big_nohaplotig	CDS	80436962	80437027	.	+	1	Parent=ORF1239.mrna1;Target=ORF1239 468 533 +
ChrX	stalkie_big_nohaplotig	CDS	80437134	80437199	.	+	1	Parent=ORF1239.mrna1;Target=ORF1239 534 599 +
ChrX	stalkie_big_nohaplotig	CDS	80438338	80438400	.	+	1	Parent=ORF1239.mrna1;Target=ORF1239 600 662 +
ChrX	stalkie_big_nohaplotig	CDS	80441619	80441693	.	+	1	Parent=ORF1239.mrna1;Target=ORF1239 663 737 +
ChrX	stalkie_big_nohaplotig	CDS	80442309	80442383	.	+	1	Parent=ORF1239.mrna1;Target=ORF1239 738 812 +
ChrX	stalkie_big_nohaplotig	CDS	80442690	80442737	.	+	1	Parent=ORF1239.mrna1;Target=ORF1239 813 860 +
ChrX	stalkie_big_nohaplotig	CDS	80443324	80443380	.	+	1	Parent=ORF1239.mrna1;Target=ORF1239 861 917 +
ChrX	stalkie_big_nohaplotig	CDS	80445877	80446129	.	+	1	Parent=ORF1239.mrna1;Target=ORF1239 918 1170 +
ChrX	gffcl	locus	80486740	80487723	.	-	.	ID=RLOC_00004415;geneIDs=FBgn0032004.1.path1;transcripts=FBgn0032004.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80486740	80487723	.	-	.	ID=FBgn0032004.1.mrna1;geneID=FBgn0032004.1.path1;Name=FBgn0032004.1;Dir=sensecoverage=100.0;identity=100.0;matches=870;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004415
ChrX	stalkie_big_nohaplotig	exon	80486740	80487354	100	-	.	Parent=FBgn0032004.1.mrna1;Target=FBgn0032004.1 256 870 +
ChrX	stalkie_big_nohaplotig	exon	80487469	80487723	100	-	.	Parent=FBgn0032004.1.mrna1;Target=FBgn0032004.1 1 255 +
ChrX	stalkie_big_nohaplotig	CDS	80486740	80487354	.	-	0	Parent=FBgn0032004.1.mrna1;Target=FBgn0032004.1 256 870 +
ChrX	stalkie_big_nohaplotig	CDS	80487469	80487723	.	-	0	Parent=FBgn0032004.1.mrna1;Target=FBgn0032004.1 1 255 +
ChrX	gffcl	locus	80506921	80507289	.	+	.	ID=RLOC_00004416;geneIDs=comp155758_c0_seq1.path1;transcripts=comp155758_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80506921	80507289	.	+	.	ID=comp155758_c0_seq1.mrna1;geneID=comp155758_c0_seq1.path1;Name=comp155758_c0_seq1;Dir=indeterminatecoverage=86.2;identity=98.9;matches=365;mismatches=4;indels=0;unknowns=0;Target=comp155758_c0_seq1 369 1 .;CDS_Target=comp155758_c0_seq1 308 204 .;locus=RLOC_00004416
ChrX	stalkie_big_nohaplotig	exon	80506921	80507289	98	+	.	Parent=comp155758_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	80507124	80507228	.	+	0	Parent=comp155758_c0_seq1.mrna1
ChrX	gffcl	locus	80546000	80546893	.	-	.	ID=RLOC_00004417;geneIDs=comp1299915_c0_seq1.path1;transcripts=comp1299915_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80546000	80546893	.	-	.	ID=comp1299915_c0_seq1.mrna1;geneID=comp1299915_c0_seq1.path1;Name=comp1299915_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=894;mismatches=0;indels=0;unknowns=0;Target=comp1299915_c0_seq1 894 1 .;CDS_Target=comp1299915_c0_seq1 567 442 .;locus=RLOC_00004417
ChrX	stalkie_big_nohaplotig	exon	80546000	80546893	100	-	.	Parent=comp1299915_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	80546327	80546452	.	-	0	Parent=comp1299915_c0_seq1.mrna1
ChrX	gffcl	locus	80572028	80694119	.	-	.	ID=RLOC_00004418;geneIDs=comp143844_c0_seq1.path1,comp149534_c0_seq1.path1;transcripts=comp149534_c0_seq1.mrna1,comp143844_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80572028	80694119	.	-	.	ID=comp149534_c0_seq1.mrna1;geneID=comp149534_c0_seq1.path1;Name=comp149534_c0_seq1;Dir=antisensecoverage=93.3;identity=96.9;matches=652;mismatches=5;indels=16;unknowns=0;Target=comp149534_c0_seq1 374 562 .;locus=RLOC_00004418
ChrX	stalkie_big_nohaplotig	exon	80572028	80572337	100	-	.	Parent=comp149534_c0_seq1.mrna1;Target=comp149534_c0_seq1 5 314 -
ChrX	stalkie_big_nohaplotig	exon	80572416	80572677	99	-	.	Parent=comp149534_c0_seq1.mrna1;Target=comp149534_c0_seq1 315 576 -
ChrX	stalkie_big_nohaplotig	exon	80596155	80596161	100	-	.	Parent=comp149534_c0_seq1.mrna1;Target=comp149534_c0_seq1 577 583 -
ChrX	stalkie_big_nohaplotig	exon	80607047	80607055	100	-	.	Parent=comp149534_c0_seq1.mrna1;Target=comp149534_c0_seq1 584 592 -
ChrX	stalkie_big_nohaplotig	exon	80611651	80611654	100	-	.	Parent=comp149534_c0_seq1.mrna1;Target=comp149534_c0_seq1 593 596 -
ChrX	stalkie_big_nohaplotig	exon	80622530	80622541	100	-	.	Parent=comp149534_c0_seq1.mrna1;Target=comp149534_c0_seq1 597 608 -
ChrX	stalkie_big_nohaplotig	exon	80634387	80634392	23	-	.	Parent=comp149534_c0_seq1.mrna1;Target=comp149534_c0_seq1 609 629 -
ChrX	stalkie_big_nohaplotig	exon	80638769	80638773	100	-	.	Parent=comp149534_c0_seq1.mrna1;Target=comp149534_c0_seq1 630 634 -
ChrX	stalkie_big_nohaplotig	exon	80660094	80660097	100	-	.	Parent=comp149534_c0_seq1.mrna1;Target=comp149534_c0_seq1 635 638 -
ChrX	stalkie_big_nohaplotig	exon	80668176	80668193	83	-	.	Parent=comp149534_c0_seq1.mrna1;Target=comp149534_c0_seq1 639 655 -
ChrX	stalkie_big_nohaplotig	exon	80675603	80675609	100	-	.	Parent=comp149534_c0_seq1.mrna1;Target=comp149534_c0_seq1 656 662 -
ChrX	stalkie_big_nohaplotig	exon	80689071	80689079	100	-	.	Parent=comp149534_c0_seq1.mrna1;Target=comp149534_c0_seq1 663 671 -
ChrX	stalkie_big_nohaplotig	exon	80694115	80694119	100	-	.	Parent=comp149534_c0_seq1.mrna1;Target=comp149534_c0_seq1 672 676 -
ChrX	stalkie_big_nohaplotig	CDS	80572475	80572663	.	-	0	Parent=comp149534_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80674950	80676014	.	-	.	ID=comp143844_c0_seq1.mrna1;geneID=comp143844_c0_seq1.path1;Name=comp143844_c0_seq1;Dir=sensecoverage=99.4;identity=99.8;matches=989;mismatches=2;indels=0;unknowns=0;Target=comp143844_c0_seq1 221 313 +;locus=RLOC_00004418
ChrX	stalkie_big_nohaplotig	exon	80674950	80675349	100	-	.	Parent=comp143844_c0_seq1.mrna1;Target=comp143844_c0_seq1 598 997 +
ChrX	stalkie_big_nohaplotig	exon	80675424	80676014	99	-	.	Parent=comp143844_c0_seq1.mrna1;Target=comp143844_c0_seq1 7 597 +
ChrX	stalkie_big_nohaplotig	CDS	80675708	80675800	.	-	0	Parent=comp143844_c0_seq1.mrna1
ChrX	gffcl	locus	80631862	80722758	.	-	.	ID=RLOC_00004420;geneIDs=comp162859_c0_seq1.path1;transcripts=comp162859_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80631862	80722758	.	-	.	ID=comp162859_c0_seq1.mrna1;geneID=comp162859_c0_seq1.path1;Name=comp162859_c0_seq1;Dir=antisensecoverage=99.6;identity=97.1;matches=1327;mismatches=36;indels=4;unknowns=0;locus=RLOC_00004420
ChrX	stalkie_big_nohaplotig	exon	80631862	80632053	98	-	.	Parent=comp162859_c0_seq1.mrna1;Target=comp162859_c0_seq1 5 197 -
ChrX	stalkie_big_nohaplotig	exon	80692928	80692931	100	-	.	Parent=comp162859_c0_seq1.mrna1;Target=comp162859_c0_seq1 198 201 -
ChrX	stalkie_big_nohaplotig	exon	80721176	80721270	100	-	.	Parent=comp162859_c0_seq1.mrna1;Target=comp162859_c0_seq1 202 296 -
ChrX	stalkie_big_nohaplotig	exon	80721369	80721476	98	-	.	Parent=comp162859_c0_seq1.mrna1;Target=comp162859_c0_seq1 297 404 -
ChrX	stalkie_big_nohaplotig	exon	80721535	80721696	91	-	.	Parent=comp162859_c0_seq1.mrna1;Target=comp162859_c0_seq1 405 566 -
ChrX	stalkie_big_nohaplotig	exon	80721759	80721867	99	-	.	Parent=comp162859_c0_seq1.mrna1;Target=comp162859_c0_seq1 567 675 -
ChrX	stalkie_big_nohaplotig	exon	80721943	80722057	100	-	.	Parent=comp162859_c0_seq1.mrna1;Target=comp162859_c0_seq1 676 790 -
ChrX	stalkie_big_nohaplotig	exon	80722113	80722475	96	-	.	Parent=comp162859_c0_seq1.mrna1;Target=comp162859_c0_seq1 791 1155 -
ChrX	stalkie_big_nohaplotig	exon	80722543	80722758	96	-	.	Parent=comp162859_c0_seq1.mrna1;Target=comp162859_c0_seq1 1156 1370 -
ChrX	stalkie_big_nohaplotig	CDS	80631966	80632053	.	-	2	Parent=comp162859_c0_seq1.mrna1;Target=comp162859_c0_seq1 109 197 .
ChrX	stalkie_big_nohaplotig	CDS	80692928	80692931	.	-	0	Parent=comp162859_c0_seq1.mrna1;Target=comp162859_c0_seq1 198 201 .
ChrX	stalkie_big_nohaplotig	CDS	80721176	80721229	.	-	0	Parent=comp162859_c0_seq1.mrna1;Target=comp162859_c0_seq1 202 255 .
ChrX	gffcl	locus	80670048	80670928	.	+	.	ID=RLOC_00004421;geneIDs=comp156680_c0_seq1.path1;transcripts=comp156680_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80670048	80670928	.	+	.	ID=comp156680_c0_seq1.mrna1;geneID=comp156680_c0_seq1.path1;Name=comp156680_c0_seq1;Dir=sensecoverage=98.6;identity=99.9;matches=681;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004421
ChrX	stalkie_big_nohaplotig	exon	80670048	80670216	100	+	.	Parent=comp156680_c0_seq1.mrna1;Target=comp156680_c0_seq1 1 169 +
ChrX	stalkie_big_nohaplotig	exon	80670296	80670394	100	+	.	Parent=comp156680_c0_seq1.mrna1;Target=comp156680_c0_seq1 170 268 +
ChrX	stalkie_big_nohaplotig	exon	80670451	80670521	100	+	.	Parent=comp156680_c0_seq1.mrna1;Target=comp156680_c0_seq1 269 339 +
ChrX	stalkie_big_nohaplotig	exon	80670586	80670928	99	+	.	Parent=comp156680_c0_seq1.mrna1;Target=comp156680_c0_seq1 340 682 +
ChrX	stalkie_big_nohaplotig	CDS	80670381	80670394	.	+	0	Parent=comp156680_c0_seq1.mrna1;Target=comp156680_c0_seq1 255 268 +
ChrX	stalkie_big_nohaplotig	CDS	80670451	80670521	.	+	1	Parent=comp156680_c0_seq1.mrna1;Target=comp156680_c0_seq1 269 339 +
ChrX	stalkie_big_nohaplotig	CDS	80670586	80670665	.	+	2	Parent=comp156680_c0_seq1.mrna1;Target=comp156680_c0_seq1 340 419 +
ChrX	gffcl	locus	80769487	80770718	.	-	.	ID=RLOC_00004422;geneIDs=comp156558_c0_seq1.path1;transcripts=comp156558_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80769487	80770718	.	-	.	ID=comp156558_c0_seq1.mrna1;geneID=comp156558_c0_seq1.path1;Name=comp156558_c0_seq1;Dir=antisensecoverage=98.8;identity=99.9;matches=968;mismatches=0;indels=1;unknowns=0;locus=RLOC_00004422
ChrX	stalkie_big_nohaplotig	exon	80769487	80769920	100	-	.	Parent=comp156558_c0_seq1.mrna1;Target=comp156558_c0_seq1 13 446 -
ChrX	stalkie_big_nohaplotig	exon	80769985	80770055	100	-	.	Parent=comp156558_c0_seq1.mrna1;Target=comp156558_c0_seq1 447 517 -
ChrX	stalkie_big_nohaplotig	exon	80770110	80770205	100	-	.	Parent=comp156558_c0_seq1.mrna1;Target=comp156558_c0_seq1 518 613 -
ChrX	stalkie_big_nohaplotig	exon	80770268	80770397	100	-	.	Parent=comp156558_c0_seq1.mrna1;Target=comp156558_c0_seq1 614 743 -
ChrX	stalkie_big_nohaplotig	exon	80770482	80770718	99	-	.	Parent=comp156558_c0_seq1.mrna1;Target=comp156558_c0_seq1 744 981 -
ChrX	stalkie_big_nohaplotig	CDS	80769841	80769920	.	-	2	Parent=comp156558_c0_seq1.mrna1;Target=comp156558_c0_seq1 367 446 .
ChrX	stalkie_big_nohaplotig	CDS	80769985	80770055	.	-	1	Parent=comp156558_c0_seq1.mrna1;Target=comp156558_c0_seq1 447 517 .
ChrX	stalkie_big_nohaplotig	CDS	80770110	80770123	.	-	0	Parent=comp156558_c0_seq1.mrna1;Target=comp156558_c0_seq1 518 531 .
ChrX	gffcl	locus	80782625	80786199	.	+	.	ID=RLOC_00004423;geneIDs=FBgn0085410.path1;transcripts=FBgn0085410.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80782625	80786199	.	+	.	ID=FBgn0085410.mrna1;geneID=FBgn0085410.path1;Name=FBgn0085410;Dir=sensecoverage=98.1;identity=100.0;matches=612;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004423
ChrX	stalkie_big_nohaplotig	exon	80782625	80782804	100	+	.	Parent=FBgn0085410.mrna1;Target=FBgn0085410 13 192 +
ChrX	stalkie_big_nohaplotig	exon	80785487	80785687	100	+	.	Parent=FBgn0085410.mrna1;Target=FBgn0085410 193 393 +
ChrX	stalkie_big_nohaplotig	exon	80785969	80786199	100	+	.	Parent=FBgn0085410.mrna1;Target=FBgn0085410 394 624 +
ChrX	stalkie_big_nohaplotig	CDS	80782625	80782804	.	+	0	Parent=FBgn0085410.mrna1;Target=FBgn0085410 13 192 +
ChrX	stalkie_big_nohaplotig	CDS	80785487	80785687	.	+	0	Parent=FBgn0085410.mrna1;Target=FBgn0085410 193 393 +
ChrX	stalkie_big_nohaplotig	CDS	80785969	80786199	.	+	0	Parent=FBgn0085410.mrna1;Target=FBgn0085410 394 624 +
ChrX	gffcl	locus	80797288	80797355	.	-	.	ID=RLOC_00004424;geneIDs=comp157179_c5_seq1.path2;transcripts=comp157179_c5_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	80797288	80797355	.	-	.	ID=comp157179_c5_seq1.mrna2;geneID=comp157179_c5_seq1.path2;Name=comp157179_c5_seq1;Dir=indeterminatecoverage=4.8;identity=100.0;matches=68;mismatches=0;indels=0;unknowns=0;Target=comp157179_c5_seq1 1406 1339 .;locus=RLOC_00004424
ChrX	stalkie_big_nohaplotig	exon	80797288	80797355	100	-	.	Parent=comp157179_c5_seq1.mrna2
ChrX	gffcl	locus	80829250	80830211	.	-	.	ID=RLOC_00004425;geneIDs=comp157536_c0_seq1.path1;transcripts=comp157536_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80829250	80830211	.	-	.	ID=comp157536_c0_seq1.mrna1;geneID=comp157536_c0_seq1.path1;Name=comp157536_c0_seq1;Dir=indeterminatecoverage=96.1;identity=99.3;matches=955;mismatches=7;indels=0;unknowns=0;Target=comp157536_c0_seq1 978 17 .;CDS_Target=comp157536_c0_seq1 683 603 .;locus=RLOC_00004425
ChrX	stalkie_big_nohaplotig	exon	80829250	80830211	99	-	.	Parent=comp157536_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	80829545	80829625	.	-	0	Parent=comp157536_c0_seq1.mrna1
ChrX	gffcl	locus	80846034	80847430	.	+	.	ID=RLOC_00004426;geneIDs=comp150883_c0_seq1.path1;transcripts=comp150883_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80846034	80847430	.	+	.	ID=comp150883_c0_seq1.mrna1;geneID=comp150883_c0_seq1.path1;Name=comp150883_c0_seq1;Dir=sensecoverage=98.8;identity=99.0;matches=705;mismatches=5;indels=2;unknowns=0;locus=RLOC_00004426
ChrX	stalkie_big_nohaplotig	exon	80846034	80846245	99	+	.	Parent=comp150883_c0_seq1.mrna1;Target=comp150883_c0_seq1 9 221 +
ChrX	stalkie_big_nohaplotig	exon	80846299	80846361	100	+	.	Parent=comp150883_c0_seq1.mrna1;Target=comp150883_c0_seq1 222 284 +
ChrX	stalkie_big_nohaplotig	exon	80846460	80846586	100	+	.	Parent=comp150883_c0_seq1.mrna1;Target=comp150883_c0_seq1 285 411 +
ChrX	stalkie_big_nohaplotig	exon	80846996	80847042	100	+	.	Parent=comp150883_c0_seq1.mrna1;Target=comp150883_c0_seq1 412 458 +
ChrX	stalkie_big_nohaplotig	exon	80847122	80847333	98	+	.	Parent=comp150883_c0_seq1.mrna1;Target=comp150883_c0_seq1 459 669 +
ChrX	stalkie_big_nohaplotig	exon	80847381	80847430	94	+	.	Parent=comp150883_c0_seq1.mrna1;Target=comp150883_c0_seq1 670 719 +
ChrX	stalkie_big_nohaplotig	CDS	80847033	80847042	.	+	0	Parent=comp150883_c0_seq1.mrna1;Target=comp150883_c0_seq1 449 458 +
ChrX	stalkie_big_nohaplotig	CDS	80847122	80847165	.	+	2	Parent=comp150883_c0_seq1.mrna1;Target=comp150883_c0_seq1 459 502 +
ChrX	gffcl	locus	80867046	80869037	.	+	.	ID=RLOC_00004427;geneIDs=comp159483_c0_seq1.path1;transcripts=comp159483_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80867046	80869037	.	+	.	ID=comp159483_c0_seq1.mrna1;geneID=comp159483_c0_seq1.path1;Name=comp159483_c0_seq1;Dir=antisensecoverage=98.7;identity=96.7;matches=1335;mismatches=5;indels=41;unknowns=0;Target=comp159483_c0_seq1 84 203 .;locus=RLOC_00004427
ChrX	stalkie_big_nohaplotig	exon	80867046	80867257	98	+	.	Parent=comp159483_c0_seq1.mrna1;Target=comp159483_c0_seq1 1181 1396 -
ChrX	stalkie_big_nohaplotig	exon	80867315	80867509	100	+	.	Parent=comp159483_c0_seq1.mrna1;Target=comp159483_c0_seq1 986 1180 -
ChrX	stalkie_big_nohaplotig	exon	80867634	80867851	100	+	.	Parent=comp159483_c0_seq1.mrna1;Target=comp159483_c0_seq1 768 985 -
ChrX	stalkie_big_nohaplotig	exon	80868259	80868705	98	+	.	Parent=comp159483_c0_seq1.mrna1;Target=comp159483_c0_seq1 324 767 -
ChrX	stalkie_big_nohaplotig	exon	80868767	80869037	87	+	.	Parent=comp159483_c0_seq1.mrna1;Target=comp159483_c0_seq1 19 323 -
ChrX	stalkie_big_nohaplotig	CDS	80868853	80868972	.	+	0	Parent=comp159483_c0_seq1.mrna1
ChrX	gffcl	locus	80872491	80875606	.	-	.	ID=RLOC_00004428;geneIDs=ORF1079.path1;transcripts=ORF1079.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80872491	80875606	.	-	.	ID=ORF1079.mrna1;geneID=ORF1079.path1;Name=ORF1079;Dir=sensecoverage=100.0;identity=98.9;matches=1234;mismatches=14;indels=0;unknowns=0;locus=RLOC_00004428
ChrX	stalkie_big_nohaplotig	exon	80872491	80873276	98	-	.	Parent=ORF1079.mrna1;Target=ORF1079 463 1248 +
ChrX	stalkie_big_nohaplotig	exon	80873447	80873578	99	-	.	Parent=ORF1079.mrna1;Target=ORF1079 331 462 +
ChrX	stalkie_big_nohaplotig	exon	80875108	80875250	100	-	.	Parent=ORF1079.mrna1;Target=ORF1079 188 330 +
ChrX	stalkie_big_nohaplotig	exon	80875331	80875502	99	-	.	Parent=ORF1079.mrna1;Target=ORF1079 16 187 +
ChrX	stalkie_big_nohaplotig	exon	80875592	80875606	100	-	.	Parent=ORF1079.mrna1;Target=ORF1079 1 15 +
ChrX	stalkie_big_nohaplotig	CDS	80872491	80873276	.	-	0	Parent=ORF1079.mrna1;Target=ORF1079 463 1248 +
ChrX	stalkie_big_nohaplotig	CDS	80873447	80873578	.	-	0	Parent=ORF1079.mrna1;Target=ORF1079 331 462 +
ChrX	stalkie_big_nohaplotig	CDS	80875108	80875250	.	-	2	Parent=ORF1079.mrna1;Target=ORF1079 188 330 +
ChrX	stalkie_big_nohaplotig	CDS	80875331	80875502	.	-	0	Parent=ORF1079.mrna1;Target=ORF1079 16 187 +
ChrX	stalkie_big_nohaplotig	CDS	80875592	80875606	.	-	0	Parent=ORF1079.mrna1;Target=ORF1079 1 15 +
ChrX	gffcl	locus	80912348	80912679	.	-	.	ID=RLOC_00004429;geneIDs=comp91978_c1_seq1.path1;transcripts=comp91978_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80912348	80912679	.	-	.	ID=comp91978_c1_seq1.mrna1;geneID=comp91978_c1_seq1.path1;Name=comp91978_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=330;mismatches=2;indels=0;unknowns=0;Target=comp91978_c1_seq1 332 1 .;CDS_Target=comp91978_c1_seq1 123 1 .;locus=RLOC_00004429
ChrX	stalkie_big_nohaplotig	exon	80912348	80912679	99	-	.	Parent=comp91978_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	80912557	80912679	.	-	0	Parent=comp91978_c1_seq1.mrna1
ChrX	gffcl	locus	80914152	80919338	.	-	.	ID=RLOC_00004430;geneIDs=FBgn0031745.1.path1;transcripts=FBgn0031745.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80914152	80919338	.	-	.	ID=FBgn0031745.1.mrna1;geneID=FBgn0031745.1.path1;Name=FBgn0031745.1;Dir=sensecoverage=94.0;identity=100.0;matches=1587;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004430
ChrX	stalkie_big_nohaplotig	exon	80914152	80915129	100	-	.	Parent=FBgn0031745.1.mrna1;Target=FBgn0031745.1 712 1689 +
ChrX	stalkie_big_nohaplotig	exon	80916894	80917071	100	-	.	Parent=FBgn0031745.1.mrna1;Target=FBgn0031745.1 534 711 +
ChrX	stalkie_big_nohaplotig	exon	80917142	80917288	100	-	.	Parent=FBgn0031745.1.mrna1;Target=FBgn0031745.1 387 533 +
ChrX	stalkie_big_nohaplotig	exon	80917364	80917473	100	-	.	Parent=FBgn0031745.1.mrna1;Target=FBgn0031745.1 277 386 +
ChrX	stalkie_big_nohaplotig	exon	80919165	80919338	100	-	.	Parent=FBgn0031745.1.mrna1;Target=FBgn0031745.1 103 276 +
ChrX	stalkie_big_nohaplotig	CDS	80914152	80915129	.	-	0	Parent=FBgn0031745.1.mrna1;Target=FBgn0031745.1 712 1689 +
ChrX	stalkie_big_nohaplotig	CDS	80916894	80917071	.	-	1	Parent=FBgn0031745.1.mrna1;Target=FBgn0031745.1 534 711 +
ChrX	stalkie_big_nohaplotig	CDS	80917142	80917288	.	-	1	Parent=FBgn0031745.1.mrna1;Target=FBgn0031745.1 387 533 +
ChrX	stalkie_big_nohaplotig	CDS	80917364	80917473	.	-	0	Parent=FBgn0031745.1.mrna1;Target=FBgn0031745.1 277 386 +
ChrX	stalkie_big_nohaplotig	CDS	80919165	80919338	.	-	0	Parent=FBgn0031745.1.mrna1;Target=FBgn0031745.1 103 276 +
ChrX	gffcl	locus	80972333	81006504	.	-	.	ID=RLOC_00004431;geneIDs=comp117837_c0_seq1.path1,comp117837_c0_seq1.path2;transcripts=comp117837_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	80972333	81006504	.	-	.	ID=comp117837_c0_seq1.mrna1;geneID=comp117837_c0_seq1.path1;Name=comp117837_c0_seq1;Dir=indeterminatecoverage=92.8;identity=100.0;matches=685;mismatches=0;indels=0;unknowns=0;Target=comp117837_c0_seq1 485 363 .;locus=RLOC_00004431
ChrX	stalkie_big_nohaplotig	exon	80972333	80972336	100	-	.	Parent=comp117837_c0_seq1.mrna1;Target=comp117837_c0_seq1 686 683 .
ChrX	stalkie_big_nohaplotig	exon	80978497	80978503	100	-	.	Parent=comp117837_c0_seq1.mrna1;Target=comp117837_c0_seq1 682 676 .
ChrX	stalkie_big_nohaplotig	exon	80979618	80979626	100	-	.	Parent=comp117837_c0_seq1.mrna1;Target=comp117837_c0_seq1 675 667 .
ChrX	stalkie_big_nohaplotig	exon	80989939	80989941	100	-	.	Parent=comp117837_c0_seq1.mrna1;Target=comp117837_c0_seq1 666 664 .
ChrX	stalkie_big_nohaplotig	exon	80992458	80992462	100	-	.	Parent=comp117837_c0_seq1.mrna1;Target=comp117837_c0_seq1 663 659 .
ChrX	stalkie_big_nohaplotig	exon	81005848	81006504	100	-	.	Parent=comp117837_c0_seq1.mrna1;Target=comp117837_c0_seq1 658 2 .
ChrX	stalkie_big_nohaplotig	CDS	81006021	81006143	.	-	0	Parent=comp117837_c0_seq1.mrna1
ChrX	gffcl	locus	81011862	81014303	.	+	.	ID=RLOC_00004432;geneIDs=comp150640_c0_seq1.path1;transcripts=comp150640_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81011862	81014303	.	+	.	ID=comp150640_c0_seq1.mrna1;geneID=comp150640_c0_seq1.path1;Name=comp150640_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=506;mismatches=1;indels=0;unknowns=0;Target=comp150640_c0_seq1 191 355 .;locus=RLOC_00004432
ChrX	stalkie_big_nohaplotig	exon	81011862	81012002	100	+	.	Parent=comp150640_c0_seq1.mrna1;Target=comp150640_c0_seq1 367 507 -
ChrX	stalkie_big_nohaplotig	exon	81013880	81014114	100	+	.	Parent=comp150640_c0_seq1.mrna1;Target=comp150640_c0_seq1 132 366 -
ChrX	stalkie_big_nohaplotig	exon	81014173	81014303	99	+	.	Parent=comp150640_c0_seq1.mrna1;Target=comp150640_c0_seq1 1 131 -
ChrX	stalkie_big_nohaplotig	CDS	81013891	81014055	.	+	0	Parent=comp150640_c0_seq1.mrna1
ChrX	gffcl	locus	81026536	81030016	.	-	.	ID=RLOC_00004433;geneIDs=comp149246_c0_seq1.path1;transcripts=comp149246_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81026536	81030016	.	-	.	ID=comp149246_c0_seq1.mrna1;geneID=comp149246_c0_seq1.path1;Name=comp149246_c0_seq1;Dir=antisensecoverage=100.0;identity=95.8;matches=797;mismatches=29;indels=6;unknowns=0;Target=comp149246_c0_seq1 283 429 .;locus=RLOC_00004433
ChrX	stalkie_big_nohaplotig	exon	81026536	81026781	94	-	.	Parent=comp149246_c0_seq1.mrna1;Target=comp149246_c0_seq1 1 246 -
ChrX	stalkie_big_nohaplotig	exon	81027009	81027439	94	-	.	Parent=comp149246_c0_seq1.mrna1;Target=comp149246_c0_seq1 247 671 -
ChrX	stalkie_big_nohaplotig	exon	81029862	81030016	100	-	.	Parent=comp149246_c0_seq1.mrna1;Target=comp149246_c0_seq1 672 826 -
ChrX	stalkie_big_nohaplotig	CDS	81027045	81027197	.	-	0	Parent=comp149246_c0_seq1.mrna1
ChrX	gffcl	locus	81033525	81087640	.	-	.	ID=RLOC_00004434;geneIDs=comp155310_c0_seq1.path1;transcripts=comp155310_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81033525	81087640	.	-	.	ID=comp155310_c0_seq1.mrna1;geneID=comp155310_c0_seq1.path1;Name=comp155310_c0_seq1;Dir=antisensecoverage=78.1;identity=96.4;matches=1697;mismatches=31;indels=32;unknowns=0;locus=RLOC_00004434
ChrX	stalkie_big_nohaplotig	exon	81033525	81033813	99	-	.	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 1 289 -
ChrX	stalkie_big_nohaplotig	exon	81037936	81038460	99	-	.	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 290 814 -
ChrX	stalkie_big_nohaplotig	exon	81039511	81039609	73	-	.	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 815 892 -
ChrX	stalkie_big_nohaplotig	exon	81039955	81040001	91	-	.	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 893 939 -
ChrX	stalkie_big_nohaplotig	exon	81040084	81040178	93	-	.	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 940 1034 -
ChrX	stalkie_big_nohaplotig	exon	81040250	81040327	100	-	.	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 1035 1112 -
ChrX	stalkie_big_nohaplotig	exon	81040393	81040708	99	-	.	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 1113 1428 -
ChrX	stalkie_big_nohaplotig	exon	81040805	81040869	100	-	.	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 1429 1493 -
ChrX	stalkie_big_nohaplotig	exon	81041036	81041194	87	-	.	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 1494 1644 -
ChrX	stalkie_big_nohaplotig	exon	81043852	81043861	100	-	.	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 1645 1654 -
ChrX	stalkie_big_nohaplotig	exon	81047358	81047366	88	-	.	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 1655 1663 -
ChrX	stalkie_big_nohaplotig	exon	81049474	81049479	100	-	.	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 1664 1669 -
ChrX	stalkie_big_nohaplotig	exon	81051856	81051858	100	-	.	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 1670 1672 -
ChrX	stalkie_big_nohaplotig	exon	81056045	81056050	100	-	.	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 1673 1678 -
ChrX	stalkie_big_nohaplotig	exon	81059927	81059935	88	-	.	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 1679 1687 -
ChrX	stalkie_big_nohaplotig	exon	81061768	81061775	75	-	.	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 1688 1694 -
ChrX	stalkie_big_nohaplotig	exon	81068371	81068377	100	-	.	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 1695 1701 -
ChrX	stalkie_big_nohaplotig	exon	81068564	81068570	100	-	.	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 1705 1711 -
ChrX	stalkie_big_nohaplotig	exon	81081041	81081049	100	-	.	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 1712 1720 -
ChrX	stalkie_big_nohaplotig	exon	81087631	81087640	100	-	.	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 1747 1756 -
ChrX	stalkie_big_nohaplotig	CDS	81040101	81040178	.	-	0	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 957 1034 .
ChrX	stalkie_big_nohaplotig	CDS	81040250	81040327	.	-	0	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 1035 1112 .
ChrX	stalkie_big_nohaplotig	CDS	81040393	81040440	.	-	0	Parent=comp155310_c0_seq1.mrna1;Target=comp155310_c0_seq1 1113 1160 .
ChrX	gffcl	locus	81067326	81068149	.	+	.	ID=RLOC_00004435;geneIDs=FBgn0051910.2.path1;transcripts=FBgn0051910.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81067326	81068149	.	+	.	ID=FBgn0051910.2.mrna1;geneID=FBgn0051910.2.path1;Name=FBgn0051910.2;Dir=sensecoverage=100.0;identity=100.0;matches=666;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004435
ChrX	stalkie_big_nohaplotig	exon	81067326	81067549	100	+	.	Parent=FBgn0051910.2.mrna1;Target=FBgn0051910.2 1 224 +
ChrX	stalkie_big_nohaplotig	exon	81067620	81067721	100	+	.	Parent=FBgn0051910.2.mrna1;Target=FBgn0051910.2 225 326 +
ChrX	stalkie_big_nohaplotig	exon	81067810	81068149	100	+	.	Parent=FBgn0051910.2.mrna1;Target=FBgn0051910.2 327 666 +
ChrX	stalkie_big_nohaplotig	CDS	81067326	81067549	.	+	0	Parent=FBgn0051910.2.mrna1;Target=FBgn0051910.2 1 224 +
ChrX	stalkie_big_nohaplotig	CDS	81067620	81067721	.	+	1	Parent=FBgn0051910.2.mrna1;Target=FBgn0051910.2 225 326 +
ChrX	stalkie_big_nohaplotig	CDS	81067810	81068149	.	+	1	Parent=FBgn0051910.2.mrna1;Target=FBgn0051910.2 327 666 +
ChrX	gffcl	locus	81073510	81074206	.	+	.	ID=RLOC_00004436;geneIDs=comp142710_c0_seq1.path1;transcripts=comp142710_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81073510	81074206	.	+	.	ID=comp142710_c0_seq1.mrna1;geneID=comp142710_c0_seq1.path1;Name=comp142710_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=335;mismatches=1;indels=0;unknowns=0;Target=comp142710_c0_seq1 143 265 +;locus=RLOC_00004436
ChrX	stalkie_big_nohaplotig	exon	81073510	81073824	99	+	.	Parent=comp142710_c0_seq1.mrna1;Target=comp142710_c0_seq1 1 315 +
ChrX	stalkie_big_nohaplotig	exon	81074186	81074206	100	+	.	Parent=comp142710_c0_seq1.mrna1;Target=comp142710_c0_seq1 316 336 +
ChrX	stalkie_big_nohaplotig	CDS	81073652	81073774	.	+	0	Parent=comp142710_c0_seq1.mrna1
ChrX	gffcl	locus	81076470	81077352	.	+	.	ID=RLOC_00004437;geneIDs=comp156212_c2_seq1.path1;transcripts=comp156212_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81076470	81077352	.	+	.	ID=comp156212_c2_seq1.mrna1;geneID=comp156212_c2_seq1.path1;Name=comp156212_c2_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=872;mismatches=11;indels=1;unknowns=0;Target=comp156212_c2_seq1 884 1 .;CDS_Target=comp156212_c2_seq1 543 451 .;locus=RLOC_00004437
ChrX	stalkie_big_nohaplotig	exon	81076470	81077352	98	+	.	Parent=comp156212_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	81076920	81077012	.	+	0	Parent=comp156212_c2_seq1.mrna1
ChrX	gffcl	locus	81085587	81087922	.	-	.	ID=RLOC_00004438;geneIDs=FBgn0026718.1.path2;transcripts=FBgn0026718.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	81085587	81087922	.	-	.	ID=FBgn0026718.1.mrna2;geneID=FBgn0026718.1.path2;Name=FBgn0026718.1;Dir=sensecoverage=100.0;identity=99.1;matches=838;mismatches=8;indels=0;unknowns=0;locus=RLOC_00004438
ChrX	stalkie_big_nohaplotig	exon	81085587	81086101	98	-	.	Parent=FBgn0026718.1.mrna2;Target=FBgn0026718.1 332 846 +
ChrX	stalkie_big_nohaplotig	exon	81086190	81086323	100	-	.	Parent=FBgn0026718.1.mrna2;Target=FBgn0026718.1 198 331 +
ChrX	stalkie_big_nohaplotig	exon	81087659	81087838	99	-	.	Parent=FBgn0026718.1.mrna2;Target=FBgn0026718.1 18 197 +
ChrX	stalkie_big_nohaplotig	exon	81087906	81087922	100	-	.	Parent=FBgn0026718.1.mrna2;Target=FBgn0026718.1 1 17 +
ChrX	stalkie_big_nohaplotig	CDS	81085587	81086101	.	-	2	Parent=FBgn0026718.1.mrna2;Target=FBgn0026718.1 332 846 +
ChrX	stalkie_big_nohaplotig	CDS	81086190	81086323	.	-	1	Parent=FBgn0026718.1.mrna2;Target=FBgn0026718.1 198 331 +
ChrX	stalkie_big_nohaplotig	CDS	81087659	81087838	.	-	1	Parent=FBgn0026718.1.mrna2;Target=FBgn0026718.1 18 197 +
ChrX	stalkie_big_nohaplotig	CDS	81087906	81087922	.	-	0	Parent=FBgn0026718.1.mrna2;Target=FBgn0026718.1 1 17 +
ChrX	gffcl	locus	81108929	81109543	.	+	.	ID=RLOC_00004439;geneIDs=comp59825_c0_seq1.path1;transcripts=comp59825_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81108929	81109543	.	+	.	ID=comp59825_c0_seq1.mrna1;geneID=comp59825_c0_seq1.path1;Name=comp59825_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=615;mismatches=0;indels=0;unknowns=0;Target=comp59825_c0_seq1 615 1 .;CDS_Target=comp59825_c0_seq1 614 147 .;locus=RLOC_00004439
ChrX	stalkie_big_nohaplotig	exon	81108929	81109543	100	+	.	Parent=comp59825_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	81109075	81109542	.	+	0	Parent=comp59825_c0_seq1.mrna1
ChrX	gffcl	locus	81109903	81110093	.	+	.	ID=RLOC_00004440;geneIDs=comp121237_c0_seq1.path1;transcripts=comp121237_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81109903	81110093	.	+	.	ID=comp121237_c0_seq1.mrna1;geneID=comp121237_c0_seq1.path1;Name=comp121237_c0_seq1;Dir=indeterminatecoverage=99.5;identity=86.8;matches=184;mismatches=7;indels=21;unknowns=0;Target=comp121237_c0_seq1 212 1 .;CDS_Target=comp121237_c0_seq1 210 1 .;locus=RLOC_00004440
ChrX	stalkie_big_nohaplotig	exon	81109903	81110093	86	+	.	Parent=comp121237_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	81109903	81110091	.	+	0	Parent=comp121237_c0_seq1.mrna1
ChrX	gffcl	locus	81110308	81111389	.	+	.	ID=RLOC_00004441;geneIDs=comp59249_c0_seq1.path1;transcripts=comp59249_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81110308	81111389	.	+	.	ID=comp59249_c0_seq1.mrna1;geneID=comp59249_c0_seq1.path1;Name=comp59249_c0_seq1;Dir=indeterminatecoverage=96.7;identity=100.0;matches=1082;mismatches=0;indels=0;unknowns=0;Target=comp59249_c0_seq1 1082 1 .;CDS_Target=comp59249_c0_seq1 573 1 .;locus=RLOC_00004441
ChrX	stalkie_big_nohaplotig	exon	81110308	81111389	100	+	.	Parent=comp59249_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	81110308	81110880	.	+	0	Parent=comp59249_c0_seq1.mrna1
ChrX	gffcl	locus	81131927	81134888	.	-	.	ID=RLOC_00004442;geneIDs=comp152715_c0_seq1.path1;transcripts=comp152715_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81131927	81134888	.	-	.	ID=comp152715_c0_seq1.mrna1;geneID=comp152715_c0_seq1.path1;Name=comp152715_c0_seq1;Dir=sensecoverage=100.0;identity=98.3;matches=1151;mismatches=8;indels=12;unknowns=0;Target=comp152715_c0_seq1 208 363 +;locus=RLOC_00004442
ChrX	stalkie_big_nohaplotig	exon	81131927	81132111	98	-	.	Parent=comp152715_c0_seq1.mrna1;Target=comp152715_c0_seq1 987 1171 +
ChrX	stalkie_big_nohaplotig	exon	81133915	81134888	98	-	.	Parent=comp152715_c0_seq1.mrna1;Target=comp152715_c0_seq1 1 986 +
ChrX	stalkie_big_nohaplotig	CDS	81134538	81134693	.	-	0	Parent=comp152715_c0_seq1.mrna1
ChrX	gffcl	locus	81136726	81139515	.	-	.	ID=RLOC_00004443;geneIDs=comp153704_c0_seq1.path1;transcripts=comp153704_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81136726	81139515	.	-	.	ID=comp153704_c0_seq1.mrna1;geneID=comp153704_c0_seq1.path1;Name=comp153704_c0_seq1;Dir=antisensecoverage=99.0;identity=99.4;matches=1138;mismatches=0;indels=7;unknowns=0;Target=comp153704_c0_seq1 1087 1143 .;locus=RLOC_00004443
ChrX	stalkie_big_nohaplotig	exon	81136726	81136846	100	-	.	Parent=comp153704_c0_seq1.mrna1;Target=comp153704_c0_seq1 1 121 -
ChrX	stalkie_big_nohaplotig	exon	81136930	81136998	100	-	.	Parent=comp153704_c0_seq1.mrna1;Target=comp153704_c0_seq1 122 190 -
ChrX	stalkie_big_nohaplotig	exon	81137062	81137138	100	-	.	Parent=comp153704_c0_seq1.mrna1;Target=comp153704_c0_seq1 191 267 -
ChrX	stalkie_big_nohaplotig	exon	81137697	81138250	100	-	.	Parent=comp153704_c0_seq1.mrna1;Target=comp153704_c0_seq1 268 821 -
ChrX	stalkie_big_nohaplotig	exon	81138900	81139020	100	-	.	Parent=comp153704_c0_seq1.mrna1;Target=comp153704_c0_seq1 822 942 -
ChrX	stalkie_big_nohaplotig	exon	81139261	81139337	91	-	.	Parent=comp153704_c0_seq1.mrna1;Target=comp153704_c0_seq1 943 1024 -
ChrX	stalkie_big_nohaplotig	exon	81139396	81139515	100	-	.	Parent=comp153704_c0_seq1.mrna1;Target=comp153704_c0_seq1 1025 1144 -
ChrX	stalkie_big_nohaplotig	CDS	81139458	81139514	.	-	0	Parent=comp153704_c0_seq1.mrna1
ChrX	gffcl	locus	81147679	81148487	.	-	.	ID=RLOC_00004444;geneIDs=comp116840_c0_seq1.path1;transcripts=comp116840_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81147679	81148487	.	-	.	ID=comp116840_c0_seq1.mrna1;geneID=comp116840_c0_seq1.path1;Name=comp116840_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=809;mismatches=0;indels=0;unknowns=0;Target=comp116840_c0_seq1 809 1 .;CDS_Target=comp116840_c0_seq1 493 380 .;locus=RLOC_00004444
ChrX	stalkie_big_nohaplotig	exon	81147679	81148487	100	-	.	Parent=comp116840_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	81147995	81148108	.	-	0	Parent=comp116840_c0_seq1.mrna1
ChrX	gffcl	locus	81161179	81162218	.	-	.	ID=RLOC_00004445;geneIDs=ORF1877.path1;transcripts=ORF1877.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81161179	81162218	.	-	.	ID=ORF1877.mrna1;geneID=ORF1877.path1;Name=ORF1877;Dir=sensecoverage=100.0;identity=100.0;matches=972;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004445
ChrX	stalkie_big_nohaplotig	exon	81161179	81161762	100	-	.	Parent=ORF1877.mrna1;Target=ORF1877 389 972 +
ChrX	stalkie_big_nohaplotig	exon	81161831	81162218	100	-	.	Parent=ORF1877.mrna1;Target=ORF1877 1 388 +
ChrX	stalkie_big_nohaplotig	CDS	81161179	81161762	.	-	2	Parent=ORF1877.mrna1;Target=ORF1877 389 972 +
ChrX	stalkie_big_nohaplotig	CDS	81161831	81162218	.	-	0	Parent=ORF1877.mrna1;Target=ORF1877 1 388 +
ChrX	gffcl	locus	81162747	81163367	.	-	.	ID=RLOC_00004446;geneIDs=comp161239_c2_seq1.path2;transcripts=comp161239_c2_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	81162747	81163367	.	-	.	ID=comp161239_c2_seq1.mrna2;geneID=comp161239_c2_seq1.path2;Name=comp161239_c2_seq1;Dir=indeterminatecoverage=62.1;identity=99.8;matches=620;mismatches=1;indels=0;unknowns=0;Target=comp161239_c2_seq1 998 378 .;CDS_Target=comp161239_c2_seq1 962 807 .;locus=RLOC_00004446
ChrX	stalkie_big_nohaplotig	exon	81162747	81163367	99	-	.	Parent=comp161239_c2_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	81162783	81162938	.	-	0	Parent=comp161239_c2_seq1.mrna2
ChrX	gffcl	locus	81165185	81165346	.	-	.	ID=RLOC_00004447;geneIDs=comp96969_c1_seq1.path1;transcripts=comp96969_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81165185	81165346	.	-	.	ID=comp96969_c1_seq1.mrna1;geneID=comp96969_c1_seq1.path1;Name=comp96969_c1_seq1;Dir=indeterminatecoverage=30.2;identity=81.9;matches=136;mismatches=26;indels=4;unknowns=0;Target=comp96969_c1_seq1 166 1 .;locus=RLOC_00004447
ChrX	stalkie_big_nohaplotig	exon	81165185	81165346	81	-	.	Parent=comp96969_c1_seq1.mrna1
ChrX	gffcl	locus	81166498	81168832	.	-	.	ID=RLOC_00004448;geneIDs=comp140310_c0_seq1.path1;transcripts=comp140310_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81166498	81168832	.	-	.	ID=comp140310_c0_seq1.mrna1;geneID=comp140310_c0_seq1.path1;Name=comp140310_c0_seq1;Dir=sensecoverage=96.0;identity=100.0;matches=527;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004448
ChrX	stalkie_big_nohaplotig	exon	81166498	81166607	100	-	.	Parent=comp140310_c0_seq1.mrna1;Target=comp140310_c0_seq1 440 549 +
ChrX	stalkie_big_nohaplotig	exon	81167643	81167858	100	-	.	Parent=comp140310_c0_seq1.mrna1;Target=comp140310_c0_seq1 224 439 +
ChrX	stalkie_big_nohaplotig	exon	81167923	81168005	100	-	.	Parent=comp140310_c0_seq1.mrna1;Target=comp140310_c0_seq1 141 223 +
ChrX	stalkie_big_nohaplotig	exon	81168715	81168832	100	-	.	Parent=comp140310_c0_seq1.mrna1;Target=comp140310_c0_seq1 23 140 +
ChrX	stalkie_big_nohaplotig	CDS	81167752	81167858	.	-	2	Parent=comp140310_c0_seq1.mrna1;Target=comp140310_c0_seq1 224 330 +
ChrX	stalkie_big_nohaplotig	CDS	81167923	81167941	.	-	0	Parent=comp140310_c0_seq1.mrna1;Target=comp140310_c0_seq1 205 223 +
ChrX	gffcl	locus	81178194	81179353	.	+	.	ID=RLOC_00004449;geneIDs=FBgn0031747.1.path1;transcripts=FBgn0031747.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81178194	81179353	.	+	.	ID=FBgn0031747.1.mrna1;geneID=FBgn0031747.1.path1;Name=FBgn0031747.1;Dir=sensecoverage=100.0;identity=100.0;matches=1092;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004449
ChrX	stalkie_big_nohaplotig	exon	81178194	81178650	100	+	.	Parent=FBgn0031747.1.mrna1;Target=FBgn0031747.1 1 457 +
ChrX	stalkie_big_nohaplotig	exon	81178719	81179353	100	+	.	Parent=FBgn0031747.1.mrna1;Target=FBgn0031747.1 458 1092 +
ChrX	stalkie_big_nohaplotig	CDS	81178194	81178650	.	+	0	Parent=FBgn0031747.1.mrna1;Target=FBgn0031747.1 1 457 +
ChrX	stalkie_big_nohaplotig	CDS	81178719	81179353	.	+	2	Parent=FBgn0031747.1.mrna1;Target=FBgn0031747.1 458 1092 +
ChrX	gffcl	locus	81195060	81697293	.	+	.	ID=RLOC_00004450;geneIDs=comp163411_c6_seq1.path1;transcripts=comp163411_c6_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81195060	81697293	.	+	.	ID=comp163411_c6_seq1.mrna1;geneID=comp163411_c6_seq1.path1;Name=comp163411_c6_seq1;Dir=sensecoverage=67.8;identity=97.4;matches=1732;mismatches=15;indels=31;unknowns=0;Target=comp163411_c6_seq1 1570 1725 +;locus=RLOC_00004450
ChrX	stalkie_big_nohaplotig	exon	81195060	81195200	99	+	.	Parent=comp163411_c6_seq1.mrna1;Target=comp163411_c6_seq1 24 164 +
ChrX	stalkie_big_nohaplotig	exon	81195257	81195407	100	+	.	Parent=comp163411_c6_seq1.mrna1;Target=comp163411_c6_seq1 165 315 +
ChrX	stalkie_big_nohaplotig	exon	81196054	81196351	99	+	.	Parent=comp163411_c6_seq1.mrna1;Target=comp163411_c6_seq1 316 613 +
ChrX	stalkie_big_nohaplotig	exon	81196487	81196591	100	+	.	Parent=comp163411_c6_seq1.mrna1;Target=comp163411_c6_seq1 614 718 +
ChrX	stalkie_big_nohaplotig	exon	81196663	81196771	93	+	.	Parent=comp163411_c6_seq1.mrna1;Target=comp163411_c6_seq1 719 827 +
ChrX	stalkie_big_nohaplotig	exon	81196861	81197754	96	+	.	Parent=comp163411_c6_seq1.mrna1;Target=comp163411_c6_seq1 828 1752 +
ChrX	stalkie_big_nohaplotig	exon	81197765	81197786	100	+	.	Parent=comp163411_c6_seq1.mrna1;Target=comp163411_c6_seq1 1775 1796 +
ChrX	stalkie_big_nohaplotig	exon	81672886	81672888	100	+	.	Parent=comp163411_c6_seq1.mrna1;Target=comp163411_c6_seq1 1797 1799 +
ChrX	stalkie_big_nohaplotig	exon	81673757	81673760	100	+	.	Parent=comp163411_c6_seq1.mrna1;Target=comp163411_c6_seq1 1800 1803 +
ChrX	stalkie_big_nohaplotig	exon	81675515	81675521	100	+	.	Parent=comp163411_c6_seq1.mrna1;Target=comp163411_c6_seq1 1804 1810 +
ChrX	stalkie_big_nohaplotig	exon	81690861	81690865	100	+	.	Parent=comp163411_c6_seq1.mrna1;Target=comp163411_c6_seq1 1811 1815 +
ChrX	stalkie_big_nohaplotig	exon	81697286	81697293	100	+	.	Parent=comp163411_c6_seq1.mrna1;Target=comp163411_c6_seq1 1816 1823 +
ChrX	stalkie_big_nohaplotig	CDS	81197572	81197727	.	+	0	Parent=comp163411_c6_seq1.mrna1
ChrX	gffcl	locus	81211623	81217284	.	-	.	ID=RLOC_00004451;geneIDs=comp140310_c0_seq1.path2,comp157582_c0_seq1.path1;transcripts=comp140310_c0_seq1.mrna2,comp157582_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81211623	81213957	.	-	.	ID=comp140310_c0_seq1.mrna2;geneID=comp140310_c0_seq1.path2;Name=comp140310_c0_seq1;Dir=sensecoverage=96.0;identity=100.0;matches=527;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004451
ChrX	stalkie_big_nohaplotig	exon	81211623	81211732	100	-	.	Parent=comp140310_c0_seq1.mrna2;Target=comp140310_c0_seq1 440 549 +
ChrX	stalkie_big_nohaplotig	exon	81212768	81212983	100	-	.	Parent=comp140310_c0_seq1.mrna2;Target=comp140310_c0_seq1 224 439 +
ChrX	stalkie_big_nohaplotig	exon	81213048	81213130	100	-	.	Parent=comp140310_c0_seq1.mrna2;Target=comp140310_c0_seq1 141 223 +
ChrX	stalkie_big_nohaplotig	exon	81213840	81213957	100	-	.	Parent=comp140310_c0_seq1.mrna2;Target=comp140310_c0_seq1 23 140 +
ChrX	stalkie_big_nohaplotig	CDS	81212877	81212983	.	-	2	Parent=comp140310_c0_seq1.mrna2;Target=comp140310_c0_seq1 224 330 +
ChrX	stalkie_big_nohaplotig	CDS	81213048	81213066	.	-	0	Parent=comp140310_c0_seq1.mrna2;Target=comp140310_c0_seq1 205 223 +
ChrX	stalkie_big_nohaplotig	mRNA	81213957	81217284	.	-	.	ID=comp157582_c0_seq1.mrna1;geneID=comp157582_c0_seq1.path1;Name=comp157582_c0_seq1;Dir=sensecoverage=97.7;identity=100.0;matches=1266;mismatches=0;indels=0;unknowns=0;Target=comp157582_c0_seq1 33 179 +;locus=RLOC_00004451
ChrX	stalkie_big_nohaplotig	exon	81213957	81214337	100	-	.	Parent=comp157582_c0_seq1.mrna1;Target=comp157582_c0_seq1 916 1296 +
ChrX	stalkie_big_nohaplotig	exon	81214409	81214492	100	-	.	Parent=comp157582_c0_seq1.mrna1;Target=comp157582_c0_seq1 832 915 +
ChrX	stalkie_big_nohaplotig	exon	81215012	81215219	100	-	.	Parent=comp157582_c0_seq1.mrna1;Target=comp157582_c0_seq1 624 831 +
ChrX	stalkie_big_nohaplotig	exon	81215309	81215378	100	-	.	Parent=comp157582_c0_seq1.mrna1;Target=comp157582_c0_seq1 554 623 +
ChrX	stalkie_big_nohaplotig	exon	81216022	81216112	100	-	.	Parent=comp157582_c0_seq1.mrna1;Target=comp157582_c0_seq1 463 553 +
ChrX	stalkie_big_nohaplotig	exon	81216271	81216331	100	-	.	Parent=comp157582_c0_seq1.mrna1;Target=comp157582_c0_seq1 402 462 +
ChrX	stalkie_big_nohaplotig	exon	81216690	81216858	100	-	.	Parent=comp157582_c0_seq1.mrna1;Target=comp157582_c0_seq1 233 401 +
ChrX	stalkie_big_nohaplotig	exon	81217083	81217284	100	-	.	Parent=comp157582_c0_seq1.mrna1;Target=comp157582_c0_seq1 31 232 +
ChrX	stalkie_big_nohaplotig	CDS	81217136	81217282	.	-	0	Parent=comp157582_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81267257	81289703	.	+	.	ID=comp135003_c0_seq1.mrna1;geneID=comp135003_c0_seq1.path1;Name=comp135003_c0_seq1;Dir=indeterminatecoverage=89.0;identity=99.0;matches=486;mismatches=5;indels=0;unknowns=0;Target=comp135003_c0_seq1 382 284 .;locus=RLOC_00004452
ChrX	stalkie_big_nohaplotig	exon	81267257	81267267	90	+	.	Parent=comp135003_c0_seq1.mrna1;Target=comp135003_c0_seq1 75 65 .
ChrX	stalkie_big_nohaplotig	exon	81271669	81271680	75	+	.	Parent=comp135003_c0_seq1.mrna1;Target=comp135003_c0_seq1 87 76 .
ChrX	stalkie_big_nohaplotig	exon	81273009	81273018	100	+	.	Parent=comp135003_c0_seq1.mrna1;Target=comp135003_c0_seq1 97 88 .
ChrX	stalkie_big_nohaplotig	exon	81280555	81280564	100	+	.	Parent=comp135003_c0_seq1.mrna1;Target=comp135003_c0_seq1 135 126 .
ChrX	stalkie_big_nohaplotig	exon	81284599	81284603	100	+	.	Parent=comp135003_c0_seq1.mrna1;Target=comp135003_c0_seq1 140 136 .
ChrX	stalkie_big_nohaplotig	exon	81289262	81289703	99	+	.	Parent=comp135003_c0_seq1.mrna1;Target=comp135003_c0_seq1 582 141 .
ChrX	stalkie_big_nohaplotig	CDS	81289405	81289503	.	+	0	Parent=comp135003_c0_seq1.mrna1
ChrX	gffcl	locus	81287926	81288885	.	+	.	ID=RLOC_00004453;geneIDs=comp152437_c0_seq1.path1;transcripts=comp152437_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81287926	81288885	.	+	.	ID=comp152437_c0_seq1.mrna1;geneID=comp152437_c0_seq1.path1;Name=comp152437_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.0;matches=954;mismatches=6;indels=34;unknowns=0;Target=comp152437_c0_seq1 994 1 .;CDS_Target=comp152437_c0_seq1 469 317 .;locus=RLOC_00004453
ChrX	stalkie_big_nohaplotig	exon	81287926	81288885	95	+	.	Parent=comp152437_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	81288208	81288360	.	+	0	Parent=comp152437_c0_seq1.mrna1
ChrX	gffcl	locus	81291022	81291719	.	+	.	ID=RLOC_00004454;geneIDs=comp152462_c0_seq1.path1;transcripts=comp152462_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81291022	81291719	.	+	.	ID=comp152462_c0_seq1.mrna1;geneID=comp152462_c0_seq1.path1;Name=comp152462_c0_seq1;Dir=indeterminatecoverage=98.6;identity=100.0;matches=698;mismatches=0;indels=0;unknowns=0;Target=comp152462_c0_seq1 707 10 .;CDS_Target=comp152462_c0_seq1 252 148 .;locus=RLOC_00004454
ChrX	stalkie_big_nohaplotig	exon	81291022	81291719	100	+	.	Parent=comp152462_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	81291160	81291264	.	+	0	Parent=comp152462_c0_seq1.mrna1
ChrX	gffcl	locus	81291722	81293444	.	-	.	ID=RLOC_00004455;geneIDs=comp157768_c0_seq1.path1;transcripts=comp157768_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81291722	81293444	.	-	.	ID=comp157768_c0_seq1.mrna1;geneID=comp157768_c0_seq1.path1;Name=comp157768_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1714;mismatches=6;indels=5;unknowns=0;Target=comp157768_c0_seq1 1722 1 .;CDS_Target=comp157768_c0_seq1 76 2 .;locus=RLOC_00004455
ChrX	stalkie_big_nohaplotig	exon	81291722	81293444	99	-	.	Parent=comp157768_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	81293370	81293443	.	-	0	Parent=comp157768_c0_seq1.mrna1
ChrX	gffcl	locus	81300459	81301670	.	-	.	ID=RLOC_00004456;geneIDs=FBgn0039710.2.path1;transcripts=FBgn0039710.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81300459	81301670	.	-	.	ID=FBgn0039710.2.mrna1;geneID=FBgn0039710.2.path1;Name=FBgn0039710.2;Dir=sensecoverage=100.0;identity=99.2;matches=1125;mismatches=9;indels=0;unknowns=0;locus=RLOC_00004456
ChrX	stalkie_big_nohaplotig	exon	81300459	81301183	99	-	.	Parent=FBgn0039710.2.mrna1;Target=FBgn0039710.2 410 1134 +
ChrX	stalkie_big_nohaplotig	exon	81301262	81301670	99	-	.	Parent=FBgn0039710.2.mrna1;Target=FBgn0039710.2 1 409 +
ChrX	stalkie_big_nohaplotig	CDS	81300459	81301183	.	-	2	Parent=FBgn0039710.2.mrna1;Target=FBgn0039710.2 410 1134 +
ChrX	stalkie_big_nohaplotig	CDS	81301262	81301670	.	-	0	Parent=FBgn0039710.2.mrna1;Target=FBgn0039710.2 1 409 +
ChrX	gffcl	locus	81308635	81310970	.	+	.	ID=RLOC_00004457;geneIDs=FBgn0026718.1.path1;transcripts=FBgn0026718.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81308635	81310970	.	+	.	ID=FBgn0026718.1.mrna1;geneID=FBgn0026718.1.path1;Name=FBgn0026718.1;Dir=sensecoverage=100.0;identity=99.5;matches=842;mismatches=4;indels=0;unknowns=0;locus=RLOC_00004457
ChrX	stalkie_big_nohaplotig	exon	81308635	81308651	100	+	.	Parent=FBgn0026718.1.mrna1;Target=FBgn0026718.1 1 17 +
ChrX	stalkie_big_nohaplotig	exon	81308719	81308898	99	+	.	Parent=FBgn0026718.1.mrna1;Target=FBgn0026718.1 18 197 +
ChrX	stalkie_big_nohaplotig	exon	81310234	81310367	100	+	.	Parent=FBgn0026718.1.mrna1;Target=FBgn0026718.1 198 331 +
ChrX	stalkie_big_nohaplotig	exon	81310456	81310970	99	+	.	Parent=FBgn0026718.1.mrna1;Target=FBgn0026718.1 332 846 +
ChrX	stalkie_big_nohaplotig	CDS	81308635	81308651	.	+	0	Parent=FBgn0026718.1.mrna1;Target=FBgn0026718.1 1 17 +
ChrX	stalkie_big_nohaplotig	CDS	81308719	81308898	.	+	1	Parent=FBgn0026718.1.mrna1;Target=FBgn0026718.1 18 197 +
ChrX	stalkie_big_nohaplotig	CDS	81310234	81310367	.	+	1	Parent=FBgn0026718.1.mrna1;Target=FBgn0026718.1 198 331 +
ChrX	stalkie_big_nohaplotig	CDS	81310456	81310970	.	+	2	Parent=FBgn0026718.1.mrna1;Target=FBgn0026718.1 332 846 +
ChrX	gffcl	locus	81313759	81315552	.	-	.	ID=RLOC_00004458;geneIDs=ORF452.path1;transcripts=ORF452.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81313759	81315552	.	-	.	ID=ORF452.mrna1;geneID=ORF452.path1;Name=ORF452;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1782;mismatches=12;indels=0;unknowns=0;Target=ORF452 1794 1 .;locus=RLOC_00004458
ChrX	stalkie_big_nohaplotig	exon	81313759	81315552	99	-	.	Parent=ORF452.mrna1
ChrX	stalkie_big_nohaplotig	CDS	81313759	81315552	.	-	0	Parent=ORF452.mrna1
ChrX	gffcl	locus	81324218	81324955	.	+	.	ID=RLOC_00004459;geneIDs=comp143067_c0_seq1.path1;transcripts=comp143067_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81324218	81324955	.	+	.	ID=comp143067_c0_seq1.mrna1;geneID=comp143067_c0_seq1.path1;Name=comp143067_c0_seq1;Dir=sensecoverage=95.3;identity=98.9;matches=437;mismatches=5;indels=0;unknowns=0;locus=RLOC_00004459
ChrX	stalkie_big_nohaplotig	exon	81324218	81324398	99	+	.	Parent=comp143067_c0_seq1.mrna1;Target=comp143067_c0_seq1 2 182 +
ChrX	stalkie_big_nohaplotig	exon	81324522	81324614	100	+	.	Parent=comp143067_c0_seq1.mrna1;Target=comp143067_c0_seq1 183 275 +
ChrX	stalkie_big_nohaplotig	exon	81324788	81324955	97	+	.	Parent=comp143067_c0_seq1.mrna1;Target=comp143067_c0_seq1 276 443 +
ChrX	stalkie_big_nohaplotig	CDS	81324338	81324398	.	+	0	Parent=comp143067_c0_seq1.mrna1;Target=comp143067_c0_seq1 122 182 +
ChrX	stalkie_big_nohaplotig	CDS	81324522	81324614	.	+	2	Parent=comp143067_c0_seq1.mrna1;Target=comp143067_c0_seq1 183 275 +
ChrX	stalkie_big_nohaplotig	CDS	81324788	81324807	.	+	2	Parent=comp143067_c0_seq1.mrna1;Target=comp143067_c0_seq1 276 295 +
ChrX	gffcl	locus	81327918	81328799	.	+	.	ID=RLOC_00004460;geneIDs=comp144638_c0_seq1.path1;transcripts=comp144638_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81327918	81328799	.	+	.	ID=comp144638_c0_seq1.mrna1;geneID=comp144638_c0_seq1.path1;Name=comp144638_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=620;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004460
ChrX	stalkie_big_nohaplotig	exon	81327918	81328160	100	+	.	Parent=comp144638_c0_seq1.mrna1;Target=comp144638_c0_seq1 379 621 -
ChrX	stalkie_big_nohaplotig	exon	81328235	81328370	100	+	.	Parent=comp144638_c0_seq1.mrna1;Target=comp144638_c0_seq1 243 378 -
ChrX	stalkie_big_nohaplotig	exon	81328442	81328500	100	+	.	Parent=comp144638_c0_seq1.mrna1;Target=comp144638_c0_seq1 184 242 -
ChrX	stalkie_big_nohaplotig	exon	81328617	81328799	99	+	.	Parent=comp144638_c0_seq1.mrna1;Target=comp144638_c0_seq1 1 183 -
ChrX	stalkie_big_nohaplotig	CDS	81328014	81328160	.	+	0	Parent=comp144638_c0_seq1.mrna1;Target=comp144638_c0_seq1 379 525 .
ChrX	stalkie_big_nohaplotig	CDS	81328235	81328370	.	+	0	Parent=comp144638_c0_seq1.mrna1;Target=comp144638_c0_seq1 243 378 .
ChrX	stalkie_big_nohaplotig	CDS	81328442	81328464	.	+	2	Parent=comp144638_c0_seq1.mrna1;Target=comp144638_c0_seq1 220 242 .
ChrX	gffcl	locus	81336484	81375274	.	+	.	ID=RLOC_00004461;geneIDs=comp151063_c0_seq1.path1;transcripts=comp151063_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81336484	81375274	.	+	.	ID=comp151063_c0_seq1.mrna1;geneID=comp151063_c0_seq1.path1;Name=comp151063_c0_seq1;Dir=sensecoverage=99.8;identity=99.4;matches=502;mismatches=3;indels=0;unknowns=0;locus=RLOC_00004461
ChrX	stalkie_big_nohaplotig	exon	81336484	81336738	99	+	.	Parent=comp151063_c0_seq1.mrna1;Target=comp151063_c0_seq1 1 255 +
ChrX	stalkie_big_nohaplotig	exon	81374958	81375045	98	+	.	Parent=comp151063_c0_seq1.mrna1;Target=comp151063_c0_seq1 256 343 +
ChrX	stalkie_big_nohaplotig	exon	81375113	81375274	99	+	.	Parent=comp151063_c0_seq1.mrna1;Target=comp151063_c0_seq1 344 505 +
ChrX	stalkie_big_nohaplotig	CDS	81336612	81336738	.	+	0	Parent=comp151063_c0_seq1.mrna1;Target=comp151063_c0_seq1 129 255 +
ChrX	stalkie_big_nohaplotig	CDS	81374958	81374992	.	+	2	Parent=comp151063_c0_seq1.mrna1;Target=comp151063_c0_seq1 256 290 +
ChrX	gffcl	locus	81363656	81365266	.	-	.	ID=RLOC_00004462;geneIDs=FBgn0015268.6.path1;transcripts=FBgn0015268.6.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81363656	81365266	.	-	.	ID=FBgn0015268.6.mrna1;geneID=FBgn0015268.6.path1;Name=FBgn0015268.6;Dir=sensecoverage=100.0;identity=100.0;matches=1182;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004462
ChrX	stalkie_big_nohaplotig	exon	81363656	81364791	100	-	.	Parent=FBgn0015268.6.mrna1;Target=FBgn0015268.6 47 1182 +
ChrX	stalkie_big_nohaplotig	exon	81365221	81365266	100	-	.	Parent=FBgn0015268.6.mrna1;Target=FBgn0015268.6 1 46 +
ChrX	stalkie_big_nohaplotig	CDS	81363656	81364791	.	-	2	Parent=FBgn0015268.6.mrna1;Target=FBgn0015268.6 47 1182 +
ChrX	stalkie_big_nohaplotig	CDS	81365221	81365266	.	-	0	Parent=FBgn0015268.6.mrna1;Target=FBgn0015268.6 1 46 +
ChrX	gffcl	locus	81372428	81437913	.	-	.	ID=RLOC_00004463;geneIDs=comp155288_c0_seq1.path1;transcripts=comp155288_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81372428	81437913	.	-	.	ID=comp155288_c0_seq1.mrna1;geneID=comp155288_c0_seq1.path1;Name=comp155288_c0_seq1;Dir=indeterminatecoverage=99.2;identity=98.2;matches=638;mismatches=3;indels=9;unknowns=0;locus=RLOC_00004463
ChrX	stalkie_big_nohaplotig	exon	81372428	81372792	99	-	.	Parent=comp155288_c0_seq1.mrna1;Target=comp155288_c0_seq1 641 277 .
ChrX	stalkie_big_nohaplotig	exon	81372844	81372995	92	-	.	Parent=comp155288_c0_seq1.mrna1;Target=comp155288_c0_seq1 276 134 .
ChrX	stalkie_big_nohaplotig	exon	81437781	81437913	100	-	.	Parent=comp155288_c0_seq1.mrna1;Target=comp155288_c0_seq1 133 1 .
ChrX	stalkie_big_nohaplotig	CDS	81372704	81372792	.	-	2	Parent=comp155288_c0_seq1.mrna1;Target=comp155288_c0_seq1 365 277 .
ChrX	stalkie_big_nohaplotig	CDS	81372844	81372955	.	-	0	Parent=comp155288_c0_seq1.mrna1;Target=comp155288_c0_seq1 276 165 .
ChrX	gffcl	locus	81424771	81425746	.	+	.	ID=RLOC_00004464;geneIDs=comp158448_c0_seq1.path1;transcripts=comp158448_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81424771	81425746	.	+	.	ID=comp158448_c0_seq1.mrna1;geneID=comp158448_c0_seq1.path1;Name=comp158448_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=963;mismatches=5;indels=8;unknowns=0;Target=comp158448_c0_seq1 968 1 .;CDS_Target=comp158448_c0_seq1 968 720 .;locus=RLOC_00004464
ChrX	stalkie_big_nohaplotig	exon	81424771	81425746	98	+	.	Parent=comp158448_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	81425498	81425746	.	+	0	Parent=comp158448_c0_seq1.mrna1
ChrX	gffcl	locus	81439594	81440253	.	+	.	ID=RLOC_00004465;geneIDs=comp151063_c0_seq1.path2;transcripts=comp151063_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	81439594	81440253	.	+	.	ID=comp151063_c0_seq1.mrna2;geneID=comp151063_c0_seq1.path2;Name=comp151063_c0_seq1;Dir=sensecoverage=99.8;identity=97.8;matches=498;mismatches=7;indels=4;unknowns=0;locus=RLOC_00004465
ChrX	stalkie_big_nohaplotig	exon	81439594	81439852	96	+	.	Parent=comp151063_c0_seq1.mrna2;Target=comp151063_c0_seq1 1 255 +
ChrX	stalkie_big_nohaplotig	exon	81439937	81440024	98	+	.	Parent=comp151063_c0_seq1.mrna2;Target=comp151063_c0_seq1 256 343 +
ChrX	stalkie_big_nohaplotig	exon	81440092	81440253	99	+	.	Parent=comp151063_c0_seq1.mrna2;Target=comp151063_c0_seq1 344 505 +
ChrX	stalkie_big_nohaplotig	CDS	81439726	81439852	.	+	0	Parent=comp151063_c0_seq1.mrna2;Target=comp151063_c0_seq1 129 255 +
ChrX	stalkie_big_nohaplotig	CDS	81439937	81439971	.	+	2	Parent=comp151063_c0_seq1.mrna2;Target=comp151063_c0_seq1 256 290 +
ChrX	stalkie_big_nohaplotig	mRNA	81535417	81545620	.	+	.	ID=comp113852_c0_seq1.mrna1;geneID=comp113852_c0_seq1.path1;Name=comp113852_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=716;mismatches=1;indels=1;unknowns=0;Target=comp113852_c0_seq1 285 353 .;locus=RLOC_00004466
ChrX	stalkie_big_nohaplotig	exon	81535417	81536110	99	+	.	Parent=comp113852_c0_seq1.mrna1;Target=comp113852_c0_seq1 24 718 -
ChrX	stalkie_big_nohaplotig	exon	81545598	81545620	100	+	.	Parent=comp113852_c0_seq1.mrna1;Target=comp113852_c0_seq1 1 23 -
ChrX	stalkie_big_nohaplotig	CDS	81535782	81535850	.	+	0	Parent=comp113852_c0_seq1.mrna1
ChrX	gffcl	locus	81550104	81554506	.	+	.	ID=RLOC_00004467;geneIDs=FBgn0000182.path2,FBgn0052170.1.path2;transcripts=FBgn0052170.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	81550104	81554506	.	+	.	ID=FBgn0052170.1.mrna2;geneID=FBgn0052170.1.path2;Name=FBgn0052170.1;Dir=sensecoverage=39.8;identity=99.7;matches=934;mismatches=3;indels=0;unknowns=0;locus=RLOC_00004467
ChrX	stalkie_big_nohaplotig	exon	81550104	81550479	99	+	.	Parent=FBgn0052170.1.mrna2;Target=FBgn0052170.1 1416 1791 +
ChrX	stalkie_big_nohaplotig	exon	81553864	81554185	100	+	.	Parent=FBgn0052170.1.mrna2;Target=FBgn0052170.1 1792 2113 +
ChrX	stalkie_big_nohaplotig	exon	81554268	81554506	100	+	.	Parent=FBgn0052170.1.mrna2;Target=FBgn0052170.1 2114 2352 +
ChrX	stalkie_big_nohaplotig	CDS	81550104	81550479	.	+	2	Parent=FBgn0052170.1.mrna2;Target=FBgn0052170.1 1416 1791 +
ChrX	stalkie_big_nohaplotig	CDS	81553864	81554185	.	+	1	Parent=FBgn0052170.1.mrna2;Target=FBgn0052170.1 1792 2113 +
ChrX	stalkie_big_nohaplotig	CDS	81554268	81554506	.	+	0	Parent=FBgn0052170.1.mrna2;Target=FBgn0052170.1 2114 2352 +
ChrX	gffcl	locus	81567862	83458297	.	+	.	ID=RLOC_00004468;geneIDs=comp159468_c0_seq1.path1;transcripts=comp159468_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81567862	83458297	.	+	.	ID=comp159468_c0_seq1.mrna1;geneID=comp159468_c0_seq1.path1;Name=comp159468_c0_seq1;Dir=indeterminatecoverage=92.4;identity=100.0;matches=1455;mismatches=0;indels=0;unknowns=0;Target=comp159468_c0_seq1 1406 1290 .;locus=RLOC_00004468
ChrX	stalkie_big_nohaplotig	exon	81567862	81569300	100	+	.	Parent=comp159468_c0_seq1.mrna1;Target=comp159468_c0_seq1 1439 1 .
ChrX	stalkie_big_nohaplotig	exon	83442986	83442988	100	+	.	Parent=comp159468_c0_seq1.mrna1;Target=comp159468_c0_seq1 1442 1440 .
ChrX	stalkie_big_nohaplotig	exon	83453619	83453624	100	+	.	Parent=comp159468_c0_seq1.mrna1;Target=comp159468_c0_seq1 1448 1443 .
ChrX	stalkie_big_nohaplotig	exon	83458291	83458297	100	+	.	Parent=comp159468_c0_seq1.mrna1;Target=comp159468_c0_seq1 1455 1449 .
ChrX	stalkie_big_nohaplotig	CDS	81569151	81569267	.	+	0	Parent=comp159468_c0_seq1.mrna1
ChrX	gffcl	locus	81569638	81570127	.	+	.	ID=RLOC_00004469;geneIDs=comp145632_c1_seq1.path1;transcripts=comp145632_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81569638	81570127	.	+	.	ID=comp145632_c1_seq1.mrna1;geneID=comp145632_c1_seq1.path1;Name=comp145632_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=490;mismatches=0;indels=0;unknowns=0;Target=comp145632_c1_seq1 490 1 .;CDS_Target=comp145632_c1_seq1 371 189 .;locus=RLOC_00004469
ChrX	stalkie_big_nohaplotig	exon	81569638	81570127	100	+	.	Parent=comp145632_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	81569826	81570008	.	+	0	Parent=comp145632_c1_seq1.mrna1
ChrX	gffcl	locus	81570324	81571647	.	-	.	ID=RLOC_00004470;geneIDs=comp153535_c0_seq1.path1;transcripts=comp153535_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81570324	81571647	.	-	.	ID=comp153535_c0_seq1.mrna1;geneID=comp153535_c0_seq1.path1;Name=comp153535_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1324;mismatches=0;indels=0;unknowns=0;Target=comp153535_c0_seq1 1324 1 .;CDS_Target=comp153535_c0_seq1 707 576 .;locus=RLOC_00004470
ChrX	stalkie_big_nohaplotig	exon	81570324	81571647	100	-	.	Parent=comp153535_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	81570941	81571072	.	-	0	Parent=comp153535_c0_seq1.mrna1
ChrX	gffcl	locus	81574629	81575016	.	-	.	ID=RLOC_00004471;geneIDs=comp135427_c0_seq1.path1;transcripts=comp135427_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81574629	81575016	.	-	.	ID=comp135427_c0_seq1.mrna1;geneID=comp135427_c0_seq1.path1;Name=comp135427_c0_seq1;Dir=indeterminatecoverage=100.0;identity=87.6;matches=382;mismatches=6;indels=48;unknowns=0;Target=comp135427_c0_seq1 436 1 .;CDS_Target=comp135427_c0_seq1 41 3 .;locus=RLOC_00004471
ChrX	stalkie_big_nohaplotig	exon	81574629	81575016	87	-	.	Parent=comp135427_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	81574976	81575014	.	-	0	Parent=comp135427_c0_seq1.mrna1
ChrX	gffcl	locus	81575113	81575641	.	-	.	ID=RLOC_00004472;geneIDs=comp118292_c0_seq1.path1;transcripts=comp118292_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81575113	81575641	.	-	.	ID=comp118292_c0_seq1.mrna1;geneID=comp118292_c0_seq1.path1;Name=comp118292_c0_seq1;Dir=indeterminatecoverage=97.6;identity=100.0;matches=529;mismatches=0;indels=0;unknowns=0;Target=comp118292_c0_seq1 542 14 .;CDS_Target=comp118292_c0_seq1 80 15 .;locus=RLOC_00004472
ChrX	stalkie_big_nohaplotig	exon	81575113	81575641	100	-	.	Parent=comp118292_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	81575575	81575640	.	-	0	Parent=comp118292_c0_seq1.mrna1
ChrX	gffcl	locus	81658175	81658797	.	+	.	ID=RLOC_00004474;geneIDs=comp158636_c0_seq1.path1;transcripts=comp158636_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81658175	81658797	.	+	.	ID=comp158636_c0_seq1.mrna1;geneID=comp158636_c0_seq1.path1;Name=comp158636_c0_seq1;Dir=sensecoverage=99.6;identity=99.3;matches=547;mismatches=4;indels=0;unknowns=0;locus=RLOC_00004474
ChrX	stalkie_big_nohaplotig	exon	81658175	81658231	100	+	.	Parent=comp158636_c0_seq1.mrna1;Target=comp158636_c0_seq1 1 57 +
ChrX	stalkie_big_nohaplotig	exon	81658304	81658797	99	+	.	Parent=comp158636_c0_seq1.mrna1;Target=comp158636_c0_seq1 58 551 +
ChrX	stalkie_big_nohaplotig	CDS	81658176	81658231	.	+	0	Parent=comp158636_c0_seq1.mrna1;Target=comp158636_c0_seq1 2 57 +
ChrX	stalkie_big_nohaplotig	CDS	81658304	81658652	.	+	1	Parent=comp158636_c0_seq1.mrna1;Target=comp158636_c0_seq1 58 406 +
ChrX	gffcl	locus	81788366	81788992	.	+	.	ID=RLOC_00004476;geneIDs=comp139540_c0_seq1.path1;transcripts=comp139540_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81788366	81788992	.	+	.	ID=comp139540_c0_seq1.mrna1;geneID=comp139540_c0_seq1.path1;Name=comp139540_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=503;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004476
ChrX	stalkie_big_nohaplotig	exon	81788366	81788479	100	+	.	Parent=comp139540_c0_seq1.mrna1;Target=comp139540_c0_seq1 390 503 -
ChrX	stalkie_big_nohaplotig	exon	81788543	81788780	100	+	.	Parent=comp139540_c0_seq1.mrna1;Target=comp139540_c0_seq1 152 389 -
ChrX	stalkie_big_nohaplotig	exon	81788842	81788992	100	+	.	Parent=comp139540_c0_seq1.mrna1;Target=comp139540_c0_seq1 1 151 -
ChrX	stalkie_big_nohaplotig	CDS	81788366	81788479	.	+	0	Parent=comp139540_c0_seq1.mrna1;Target=comp139540_c0_seq1 390 503 .
ChrX	stalkie_big_nohaplotig	CDS	81788543	81788780	.	+	0	Parent=comp139540_c0_seq1.mrna1;Target=comp139540_c0_seq1 152 389 .
ChrX	stalkie_big_nohaplotig	CDS	81788842	81788876	.	+	2	Parent=comp139540_c0_seq1.mrna1;Target=comp139540_c0_seq1 117 151 .
ChrX	gffcl	locus	81845967	81849424	.	+	.	ID=RLOC_00004477;geneIDs=comp162926_c0_seq1.path3;transcripts=comp162926_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	81845967	81849424	.	+	.	ID=comp162926_c0_seq1.mrna3;geneID=comp162926_c0_seq1.path3;Name=comp162926_c0_seq1;Dir=sensecoverage=96.2;identity=97.6;matches=495;mismatches=5;indels=7;unknowns=0;locus=RLOC_00004477
ChrX	stalkie_big_nohaplotig	exon	81845967	81846404	97	+	.	Parent=comp162926_c0_seq1.mrna3;Target=comp162926_c0_seq1 21 465 +
ChrX	stalkie_big_nohaplotig	exon	81849363	81849424	96	+	.	Parent=comp162926_c0_seq1.mrna3;Target=comp162926_c0_seq1 466 527 +
ChrX	stalkie_big_nohaplotig	CDS	81846126	81846404	.	+	0	Parent=comp162926_c0_seq1.mrna3;Target=comp162926_c0_seq1 187 465 +
ChrX	stalkie_big_nohaplotig	CDS	81849363	81849422	.	+	0	Parent=comp162926_c0_seq1.mrna3;Target=comp162926_c0_seq1 466 525 +
ChrX	gffcl	locus	81880576	81883893	.	-	.	ID=RLOC_00004478;geneIDs=comp162926_c0_seq1.path1;transcripts=comp162926_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81880576	81883893	.	-	.	ID=comp162926_c0_seq1.mrna1;geneID=comp162926_c0_seq1.path1;Name=comp162926_c0_seq1;Dir=sensecoverage=96.8;identity=98.0;matches=500;mismatches=3;indels=7;unknowns=0;locus=RLOC_00004478
ChrX	stalkie_big_nohaplotig	exon	81880576	81880637	98	-	.	Parent=comp162926_c0_seq1.mrna1;Target=comp162926_c0_seq1 466 527 +
ChrX	stalkie_big_nohaplotig	exon	81883453	81883893	97	-	.	Parent=comp162926_c0_seq1.mrna1;Target=comp162926_c0_seq1 18 465 +
ChrX	stalkie_big_nohaplotig	CDS	81880578	81880637	.	-	0	Parent=comp162926_c0_seq1.mrna1;Target=comp162926_c0_seq1 466 525 +
ChrX	stalkie_big_nohaplotig	CDS	81883453	81883731	.	-	0	Parent=comp162926_c0_seq1.mrna1;Target=comp162926_c0_seq1 187 465 +
ChrX	gffcl	locus	81959456	81962712	.	+	.	ID=RLOC_00004479;geneIDs=comp185113_c0_seq1.path1;transcripts=comp185113_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	81959456	81962712	.	+	.	ID=comp185113_c0_seq1.mrna1;geneID=comp185113_c0_seq1.path1;Name=comp185113_c0_seq1;Dir=antisensecoverage=93.5;identity=100.0;matches=724;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004479
ChrX	stalkie_big_nohaplotig	exon	81959456	81959561	100	+	.	Parent=comp185113_c0_seq1.mrna1;Target=comp185113_c0_seq1 635 740 -
ChrX	stalkie_big_nohaplotig	exon	81961982	81962102	100	+	.	Parent=comp185113_c0_seq1.mrna1;Target=comp185113_c0_seq1 514 634 -
ChrX	stalkie_big_nohaplotig	exon	81962157	81962276	100	+	.	Parent=comp185113_c0_seq1.mrna1;Target=comp185113_c0_seq1 394 513 -
ChrX	stalkie_big_nohaplotig	exon	81962336	81962712	100	+	.	Parent=comp185113_c0_seq1.mrna1;Target=comp185113_c0_seq1 17 393 -
ChrX	stalkie_big_nohaplotig	CDS	81962007	81962102	.	+	0	Parent=comp185113_c0_seq1.mrna1;Target=comp185113_c0_seq1 514 609 .
ChrX	stalkie_big_nohaplotig	CDS	81962157	81962276	.	+	0	Parent=comp185113_c0_seq1.mrna1;Target=comp185113_c0_seq1 394 513 .
ChrX	stalkie_big_nohaplotig	CDS	81962336	81962452	.	+	0	Parent=comp185113_c0_seq1.mrna1;Target=comp185113_c0_seq1 277 393 .
ChrX	stalkie_big_nohaplotig	mRNA	82036369	82162068	.	-	.	ID=comp142768_c0_seq1.mrna2;geneID=comp142768_c0_seq1.path2;Name=comp142768_c0_seq1;Dir=indeterminatecoverage=32.2;identity=81.2;matches=255;mismatches=40;indels=19;unknowns=0;locus=RLOC_00004480
ChrX	stalkie_big_nohaplotig	exon	82036369	82036372	100	-	.	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 337 334 .
ChrX	stalkie_big_nohaplotig	exon	82039349	82039373	50	-	.	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 333 292 .
ChrX	stalkie_big_nohaplotig	exon	82050676	82050687	75	-	.	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 291 280 .
ChrX	stalkie_big_nohaplotig	exon	82055046	82055051	100	-	.	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 279 274 .
ChrX	stalkie_big_nohaplotig	exon	82060425	82060438	78	-	.	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 273 261 .
ChrX	stalkie_big_nohaplotig	exon	82067561	82067563	100	-	.	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 260 258 .
ChrX	stalkie_big_nohaplotig	exon	82068276	82068277	100	-	.	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 257 256 .
ChrX	stalkie_big_nohaplotig	exon	82079279	82079285	100	-	.	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 255 249 .
ChrX	stalkie_big_nohaplotig	exon	82086387	82086389	100	-	.	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 248 246 .
ChrX	stalkie_big_nohaplotig	exon	82091358	82091360	100	-	.	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 245 243 .
ChrX	stalkie_big_nohaplotig	exon	82096544	82096546	100	-	.	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 242 240 .
ChrX	stalkie_big_nohaplotig	exon	82100316	82100323	100	-	.	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 239 232 .
ChrX	stalkie_big_nohaplotig	exon	82107254	82107255	100	-	.	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 231 230 .
ChrX	stalkie_big_nohaplotig	exon	82111864	82111868	100	-	.	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 229 225 .
ChrX	stalkie_big_nohaplotig	exon	82113363	82113364	100	-	.	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 224 223 .
ChrX	stalkie_big_nohaplotig	exon	82114726	82114727	100	-	.	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 222 221 .
ChrX	stalkie_big_nohaplotig	exon	82161837	82161903	83	-	.	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 220 153 .
ChrX	stalkie_big_nohaplotig	exon	82161941	82162068	83	-	.	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 128 1 .
ChrX	stalkie_big_nohaplotig	CDS	82050676	82050687	.	-	0	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 291 280 .
ChrX	stalkie_big_nohaplotig	CDS	82055046	82055051	.	-	0	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 279 274 .
ChrX	stalkie_big_nohaplotig	CDS	82060425	82060438	.	-	2	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 273 261 .
ChrX	stalkie_big_nohaplotig	CDS	82067561	82067563	.	-	2	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 260 258 .
ChrX	stalkie_big_nohaplotig	CDS	82068276	82068277	.	-	1	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 257 256 .
ChrX	stalkie_big_nohaplotig	CDS	82079279	82079285	.	-	2	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 255 249 .
ChrX	stalkie_big_nohaplotig	CDS	82086387	82086389	.	-	2	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 248 246 .
ChrX	stalkie_big_nohaplotig	CDS	82091358	82091360	.	-	2	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 245 243 .
ChrX	stalkie_big_nohaplotig	CDS	82096544	82096546	.	-	2	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 242 240 .
ChrX	stalkie_big_nohaplotig	CDS	82100316	82100323	.	-	1	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 239 232 .
ChrX	stalkie_big_nohaplotig	CDS	82107254	82107255	.	-	0	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 231 230 .
ChrX	stalkie_big_nohaplotig	CDS	82111864	82111868	.	-	2	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 229 225 .
ChrX	stalkie_big_nohaplotig	CDS	82113363	82113364	.	-	1	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 224 223 .
ChrX	stalkie_big_nohaplotig	CDS	82114726	82114727	.	-	0	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 222 221 .
ChrX	stalkie_big_nohaplotig	CDS	82161837	82161866	.	-	0	Parent=comp142768_c0_seq1.mrna2;Target=comp142768_c0_seq1 220 191 .
ChrX	gffcl	locus	82042230	82043338	.	-	.	ID=RLOC_00004481;geneIDs=ORF1597.path1;transcripts=ORF1597.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82042230	82043338	.	-	.	ID=ORF1597.mrna1;geneID=ORF1597.path1;Name=ORF1597;Dir=sensecoverage=100.0;identity=100.0;matches=1050;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004481
ChrX	stalkie_big_nohaplotig	exon	82042230	82042447	100	-	.	Parent=ORF1597.mrna1;Target=ORF1597 833 1050 +
ChrX	stalkie_big_nohaplotig	exon	82042507	82043338	100	-	.	Parent=ORF1597.mrna1;Target=ORF1597 1 832 +
ChrX	stalkie_big_nohaplotig	CDS	82042230	82042447	.	-	2	Parent=ORF1597.mrna1;Target=ORF1597 833 1050 +
ChrX	stalkie_big_nohaplotig	CDS	82042507	82043338	.	-	0	Parent=ORF1597.mrna1;Target=ORF1597 1 832 +
ChrX	gffcl	locus	82110316	82111091	.	-	.	ID=RLOC_00004482;geneIDs=comp149167_c0_seq1.path1;transcripts=comp149167_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82110316	82111091	.	-	.	ID=comp149167_c0_seq1.mrna1;geneID=comp149167_c0_seq1.path1;Name=comp149167_c0_seq1;Dir=sensecoverage=99.6;identity=99.6;matches=526;mismatches=2;indels=0;unknowns=0;locus=RLOC_00004482
ChrX	stalkie_big_nohaplotig	exon	82110316	82110557	99	-	.	Parent=comp149167_c0_seq1.mrna1;Target=comp149167_c0_seq1 287 528 +
ChrX	stalkie_big_nohaplotig	exon	82110806	82111091	99	-	.	Parent=comp149167_c0_seq1.mrna1;Target=comp149167_c0_seq1 1 286 +
ChrX	stalkie_big_nohaplotig	CDS	82110477	82110557	.	-	0	Parent=comp149167_c0_seq1.mrna1;Target=comp149167_c0_seq1 287 367 +
ChrX	stalkie_big_nohaplotig	CDS	82110806	82110838	.	-	0	Parent=comp149167_c0_seq1.mrna1;Target=comp149167_c0_seq1 254 286 +
ChrX	gffcl	locus	82127046	82128469	.	-	.	ID=RLOC_00004483;geneIDs=FBgn0001186.1.path1;transcripts=FBgn0001186.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82127046	82128469	.	-	.	ID=FBgn0001186.1.mrna1;geneID=FBgn0001186.1.path1;Name=FBgn0001186.1;Dir=sensecoverage=100.0;identity=100.0;matches=1365;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004483
ChrX	stalkie_big_nohaplotig	exon	82127046	82127548	100	-	.	Parent=FBgn0001186.1.mrna1;Target=FBgn0001186.1 863 1365 +
ChrX	stalkie_big_nohaplotig	exon	82127608	82128469	100	-	.	Parent=FBgn0001186.1.mrna1;Target=FBgn0001186.1 1 862 +
ChrX	stalkie_big_nohaplotig	CDS	82127046	82127548	.	-	2	Parent=FBgn0001186.1.mrna1;Target=FBgn0001186.1 863 1365 +
ChrX	stalkie_big_nohaplotig	CDS	82127608	82128469	.	-	0	Parent=FBgn0001186.1.mrna1;Target=FBgn0001186.1 1 862 +
ChrX	gffcl	locus	82161114	82161490	.	+	.	ID=RLOC_00004485;geneIDs=comp153644_c1_seq1.path1;transcripts=comp153644_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82161114	82161490	.	+	.	ID=comp153644_c1_seq1.mrna1;geneID=comp153644_c1_seq1.path1;Name=comp153644_c1_seq1;Dir=indeterminatecoverage=100.0;identity=96.8;matches=366;mismatches=6;indels=6;unknowns=0;Target=comp153644_c1_seq1 373 1 .;CDS_Target=comp153644_c1_seq1 260 150 .;locus=RLOC_00004485
ChrX	stalkie_big_nohaplotig	exon	82161114	82161490	96	+	.	Parent=comp153644_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	82161267	82161377	.	+	0	Parent=comp153644_c1_seq1.mrna1
ChrX	gffcl	locus	82284312	82285481	.	+	.	ID=RLOC_00004486;geneIDs=comp160058_c0_seq1.path1;transcripts=comp160058_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82284312	82285481	.	+	.	ID=comp160058_c0_seq1.mrna1;geneID=comp160058_c0_seq1.path1;Name=comp160058_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=1168;mismatches=2;indels=1;unknowns=0;Target=comp160058_c0_seq1 1174 4 .;CDS_Target=comp160058_c0_seq1 965 783 .;locus=RLOC_00004486
ChrX	stalkie_big_nohaplotig	exon	82284312	82285481	99	+	.	Parent=comp160058_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	82285091	82285273	.	+	0	Parent=comp160058_c0_seq1.mrna1
ChrX	gffcl	locus	82298631	82299218	.	-	.	ID=RLOC_00004487;geneIDs=FBgn0022943.3.path1;transcripts=FBgn0022943.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82298631	82299218	.	-	.	ID=FBgn0022943.3.mrna1;geneID=FBgn0022943.3.path1;Name=FBgn0022943.3;Dir=sensecoverage=100.0;identity=100.0;matches=450;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004487
ChrX	stalkie_big_nohaplotig	exon	82298631	82298694	100	-	.	Parent=FBgn0022943.3.mrna1;Target=FBgn0022943.3 387 450 +
ChrX	stalkie_big_nohaplotig	exon	82298767	82298984	100	-	.	Parent=FBgn0022943.3.mrna1;Target=FBgn0022943.3 169 386 +
ChrX	stalkie_big_nohaplotig	exon	82299051	82299218	100	-	.	Parent=FBgn0022943.3.mrna1;Target=FBgn0022943.3 1 168 +
ChrX	stalkie_big_nohaplotig	CDS	82298631	82298694	.	-	1	Parent=FBgn0022943.3.mrna1;Target=FBgn0022943.3 387 450 +
ChrX	stalkie_big_nohaplotig	CDS	82298767	82298984	.	-	0	Parent=FBgn0022943.3.mrna1;Target=FBgn0022943.3 169 386 +
ChrX	stalkie_big_nohaplotig	CDS	82299051	82299218	.	-	0	Parent=FBgn0022943.3.mrna1;Target=FBgn0022943.3 1 168 +
ChrX	gffcl	locus	82328078	82329770	.	+	.	ID=RLOC_00004488;geneIDs=comp156868_c1_seq1.path1;transcripts=comp156868_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82328078	82329770	.	+	.	ID=comp156868_c1_seq1.mrna1;geneID=comp156868_c1_seq1.path1;Name=comp156868_c1_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=1579;mismatches=2;indels=0;unknowns=0;Target=comp156868_c1_seq1 100 309 .;locus=RLOC_00004488
ChrX	stalkie_big_nohaplotig	exon	82328078	82328183	100	+	.	Parent=comp156868_c1_seq1.mrna1;Target=comp156868_c1_seq1 1476 1581 -
ChrX	stalkie_big_nohaplotig	exon	82328239	82329280	99	+	.	Parent=comp156868_c1_seq1.mrna1;Target=comp156868_c1_seq1 434 1475 -
ChrX	stalkie_big_nohaplotig	exon	82329338	82329770	100	+	.	Parent=comp156868_c1_seq1.mrna1;Target=comp156868_c1_seq1 1 433 -
ChrX	stalkie_big_nohaplotig	CDS	82329462	82329671	.	+	0	Parent=comp156868_c1_seq1.mrna1
ChrX	gffcl	locus	82347886	82489884	.	+	.	ID=RLOC_00004489;geneIDs=comp159308_c0_seq1.path1;transcripts=comp159308_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82347886	82489884	.	+	.	ID=comp159308_c0_seq1.mrna1;geneID=comp159308_c0_seq1.path1;Name=comp159308_c0_seq1;Dir=indeterminatecoverage=84.5;identity=97.2;matches=799;mismatches=10;indels=13;unknowns=0;Target=comp159308_c0_seq1 204 1 .;locus=RLOC_00004489
ChrX	stalkie_big_nohaplotig	exon	82347886	82348590	99	+	.	Parent=comp159308_c0_seq1.mrna1;Target=comp159308_c0_seq1 705 1 .
ChrX	stalkie_big_nohaplotig	exon	82366428	82366432	100	+	.	Parent=comp159308_c0_seq1.mrna1;Target=comp159308_c0_seq1 710 706 .
ChrX	stalkie_big_nohaplotig	exon	82367872	82367877	100	+	.	Parent=comp159308_c0_seq1.mrna1;Target=comp159308_c0_seq1 716 711 .
ChrX	stalkie_big_nohaplotig	exon	82373919	82373930	83	+	.	Parent=comp159308_c0_seq1.mrna1;Target=comp159308_c0_seq1 728 717 .
ChrX	stalkie_big_nohaplotig	exon	82374454	82374470	82	+	.	Parent=comp159308_c0_seq1.mrna1;Target=comp159308_c0_seq1 745 729 .
ChrX	stalkie_big_nohaplotig	exon	82389173	82389176	100	+	.	Parent=comp159308_c0_seq1.mrna1;Target=comp159308_c0_seq1 749 746 .
ChrX	stalkie_big_nohaplotig	exon	82400047	82400048	100	+	.	Parent=comp159308_c0_seq1.mrna1;Target=comp159308_c0_seq1 751 750 .
ChrX	stalkie_big_nohaplotig	exon	82404703	82404706	100	+	.	Parent=comp159308_c0_seq1.mrna1;Target=comp159308_c0_seq1 755 752 .
ChrX	stalkie_big_nohaplotig	exon	82405020	82405033	35	+	.	Parent=comp159308_c0_seq1.mrna1;Target=comp159308_c0_seq1 760 756 .
ChrX	stalkie_big_nohaplotig	exon	82407525	82407526	100	+	.	Parent=comp159308_c0_seq1.mrna1;Target=comp159308_c0_seq1 762 761 .
ChrX	stalkie_big_nohaplotig	exon	82423677	82423685	100	+	.	Parent=comp159308_c0_seq1.mrna1;Target=comp159308_c0_seq1 771 763 .
ChrX	stalkie_big_nohaplotig	exon	82428558	82428562	100	+	.	Parent=comp159308_c0_seq1.mrna1;Target=comp159308_c0_seq1 788 784 .
ChrX	stalkie_big_nohaplotig	exon	82450811	82450813	100	+	.	Parent=comp159308_c0_seq1.mrna1;Target=comp159308_c0_seq1 791 789 .
ChrX	stalkie_big_nohaplotig	exon	82453528	82453531	100	+	.	Parent=comp159308_c0_seq1.mrna1;Target=comp159308_c0_seq1 795 792 .
ChrX	stalkie_big_nohaplotig	exon	82469809	82469812	100	+	.	Parent=comp159308_c0_seq1.mrna1;Target=comp159308_c0_seq1 799 796 .
ChrX	stalkie_big_nohaplotig	exon	82482333	82482343	81	+	.	Parent=comp159308_c0_seq1.mrna1;Target=comp159308_c0_seq1 809 800 .
ChrX	stalkie_big_nohaplotig	exon	82482550	82482552	100	+	.	Parent=comp159308_c0_seq1.mrna1;Target=comp159308_c0_seq1 812 810 .
ChrX	stalkie_big_nohaplotig	exon	82489874	82489884	72	+	.	Parent=comp159308_c0_seq1.mrna1;Target=comp159308_c0_seq1 820 813 .
ChrX	stalkie_big_nohaplotig	CDS	82347886	82348089	.	+	0	Parent=comp159308_c0_seq1.mrna1
ChrX	gffcl	locus	82393243	82394676	.	+	.	ID=RLOC_00004490;geneIDs=FBgn0085454.2.path1;transcripts=FBgn0085454.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82393243	82394676	.	+	.	ID=FBgn0085454.2.mrna1;geneID=FBgn0085454.2.path1;Name=FBgn0085454.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1434;mismatches=0;indels=0;unknowns=0;Target=FBgn0085454.2 1434 1 .;locus=RLOC_00004490
ChrX	stalkie_big_nohaplotig	exon	82393243	82394676	100	+	.	Parent=FBgn0085454.2.mrna1
ChrX	stalkie_big_nohaplotig	CDS	82393243	82394676	.	+	0	Parent=FBgn0085454.2.mrna1
ChrX	gffcl	locus	82411222	82412041	.	-	.	ID=RLOC_00004491;geneIDs=comp145439_c1_seq1.path1;transcripts=comp145439_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82411222	82412041	.	-	.	ID=comp145439_c1_seq1.mrna1;geneID=comp145439_c1_seq1.path1;Name=comp145439_c1_seq1;Dir=antisensecoverage=99.7;identity=99.9;matches=753;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004491
ChrX	stalkie_big_nohaplotig	exon	82411222	82411775	99	-	.	Parent=comp145439_c1_seq1.mrna1;Target=comp145439_c1_seq1 2 555 -
ChrX	stalkie_big_nohaplotig	exon	82411842	82412041	100	-	.	Parent=comp145439_c1_seq1.mrna1;Target=comp145439_c1_seq1 556 755 -
ChrX	stalkie_big_nohaplotig	CDS	82411581	82411775	.	-	0	Parent=comp145439_c1_seq1.mrna1;Target=comp145439_c1_seq1 361 555 .
ChrX	stalkie_big_nohaplotig	CDS	82411842	82411898	.	-	0	Parent=comp145439_c1_seq1.mrna1;Target=comp145439_c1_seq1 556 612 .
ChrX	gffcl	locus	82434495	82697901	.	-	.	ID=RLOC_00004492;geneIDs=comp163782_c0_seq1.path1;transcripts=comp163782_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82434495	82697901	.	-	.	ID=comp163782_c0_seq1.mrna1;geneID=comp163782_c0_seq1.path1;Name=comp163782_c0_seq1;Dir=antisensecoverage=98.1;identity=93.2;matches=2125;mismatches=133;indels=21;unknowns=0;Target=comp163782_c0_seq1 2136 2176 .;locus=RLOC_00004492
ChrX	stalkie_big_nohaplotig	exon	82434495	82434916	99	-	.	Parent=comp163782_c0_seq1.mrna1;Target=comp163782_c0_seq1 23 444 -
ChrX	stalkie_big_nohaplotig	exon	82434988	82435344	95	-	.	Parent=comp163782_c0_seq1.mrna1;Target=comp163782_c0_seq1 445 802 -
ChrX	stalkie_big_nohaplotig	exon	82435408	82436105	87	-	.	Parent=comp163782_c0_seq1.mrna1;Target=comp163782_c0_seq1 803 1495 -
ChrX	stalkie_big_nohaplotig	exon	82436126	82436613	92	-	.	Parent=comp163782_c0_seq1.mrna1;Target=comp163782_c0_seq1 1544 2031 -
ChrX	stalkie_big_nohaplotig	exon	82436669	82436689	76	-	.	Parent=comp163782_c0_seq1.mrna1;Target=comp163782_c0_seq1 2051 2066 -
ChrX	stalkie_big_nohaplotig	exon	82697536	82697562	96	-	.	Parent=comp163782_c0_seq1.mrna1;Target=comp163782_c0_seq1 2067 2093 -
ChrX	stalkie_big_nohaplotig	exon	82697634	82697641	100	-	.	Parent=comp163782_c0_seq1.mrna1;Target=comp163782_c0_seq1 2107 2114 -
ChrX	stalkie_big_nohaplotig	exon	82697650	82697901	98	-	.	Parent=comp163782_c0_seq1.mrna1;Target=comp163782_c0_seq1 2136 2387 -
ChrX	stalkie_big_nohaplotig	CDS	82697650	82697690	.	-	0	Parent=comp163782_c0_seq1.mrna1
ChrX	gffcl	locus	82445796	82446704	.	+	.	ID=RLOC_00004493;geneIDs=comp156575_c0_seq1.path1;transcripts=comp156575_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82445796	82446704	.	+	.	ID=comp156575_c0_seq1.mrna1;geneID=comp156575_c0_seq1.path1;Name=comp156575_c0_seq1;Dir=indeterminatecoverage=95.7;identity=98.0;matches=897;mismatches=12;indels=6;unknowns=0;Target=comp156575_c0_seq1 915 1 .;CDS_Target=comp156575_c0_seq1 837 703 .;locus=RLOC_00004493
ChrX	stalkie_big_nohaplotig	exon	82445796	82446704	98	+	.	Parent=comp156575_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	82446492	82446626	.	+	0	Parent=comp156575_c0_seq1.mrna1
ChrX	gffcl	locus	82448168	82450472	.	+	.	ID=RLOC_00004494;geneIDs=comp159836_c0_seq1.path1;transcripts=comp159836_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82448168	82450472	.	+	.	ID=comp159836_c0_seq1.mrna1;geneID=comp159836_c0_seq1.path1;Name=comp159836_c0_seq1;Dir=sensecoverage=99.2;identity=99.8;matches=1598;mismatches=2;indels=2;unknowns=0;locus=RLOC_00004494
ChrX	stalkie_big_nohaplotig	exon	82448168	82448387	100	+	.	Parent=comp159836_c0_seq1.mrna1;Target=comp159836_c0_seq1 14 233 +
ChrX	stalkie_big_nohaplotig	exon	82448458	82448670	100	+	.	Parent=comp159836_c0_seq1.mrna1;Target=comp159836_c0_seq1 234 446 +
ChrX	stalkie_big_nohaplotig	exon	82449174	82449397	100	+	.	Parent=comp159836_c0_seq1.mrna1;Target=comp159836_c0_seq1 447 670 +
ChrX	stalkie_big_nohaplotig	exon	82449458	82449512	100	+	.	Parent=comp159836_c0_seq1.mrna1;Target=comp159836_c0_seq1 671 725 +
ChrX	stalkie_big_nohaplotig	exon	82449585	82450472	99	+	.	Parent=comp159836_c0_seq1.mrna1;Target=comp159836_c0_seq1 726 1615 +
ChrX	stalkie_big_nohaplotig	CDS	82448331	82448387	.	+	0	Parent=comp159836_c0_seq1.mrna1;Target=comp159836_c0_seq1 177 233 +
ChrX	stalkie_big_nohaplotig	CDS	82448458	82448613	.	+	0	Parent=comp159836_c0_seq1.mrna1;Target=comp159836_c0_seq1 234 389 +
ChrX	gffcl	locus	82458679	82459225	.	-	.	ID=RLOC_00004495;geneIDs=comp5060_c1_seq1.path1;transcripts=comp5060_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82458679	82459225	.	-	.	ID=comp5060_c1_seq1.mrna1;geneID=comp5060_c1_seq1.path1;Name=comp5060_c1_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=546;mismatches=1;indels=0;unknowns=0;Target=comp5060_c1_seq1 547 1 .;CDS_Target=comp5060_c1_seq1 271 185 .;locus=RLOC_00004495
ChrX	stalkie_big_nohaplotig	exon	82458679	82459225	99	-	.	Parent=comp5060_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	82458955	82459041	.	-	0	Parent=comp5060_c1_seq1.mrna1
ChrX	gffcl	locus	82462646	82785076	.	+	.	ID=RLOC_00004496;geneIDs=FBgn0028645.1.path1;transcripts=FBgn0028645.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82462646	82785076	.	+	.	ID=FBgn0028645.1.mrna1;geneID=FBgn0028645.1.path1;Name=FBgn0028645.1;Dir=sensecoverage=98.6;identity=99.8;matches=576;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004496
ChrX	stalkie_big_nohaplotig	exon	82462646	82462806	99	+	.	Parent=FBgn0028645.1.mrna1;Target=FBgn0028645.1 9 169 +
ChrX	stalkie_big_nohaplotig	exon	82752164	82752375	100	+	.	Parent=FBgn0028645.1.mrna1;Target=FBgn0028645.1 170 381 +
ChrX	stalkie_big_nohaplotig	exon	82784558	82784693	100	+	.	Parent=FBgn0028645.1.mrna1;Target=FBgn0028645.1 382 517 +
ChrX	stalkie_big_nohaplotig	exon	82785009	82785076	100	+	.	Parent=FBgn0028645.1.mrna1;Target=FBgn0028645.1 518 585 +
ChrX	stalkie_big_nohaplotig	CDS	82462647	82462806	.	+	0	Parent=FBgn0028645.1.mrna1;Target=FBgn0028645.1 10 169 +
ChrX	stalkie_big_nohaplotig	CDS	82752164	82752375	.	+	2	Parent=FBgn0028645.1.mrna1;Target=FBgn0028645.1 170 381 +
ChrX	stalkie_big_nohaplotig	CDS	82784558	82784693	.	+	0	Parent=FBgn0028645.1.mrna1;Target=FBgn0028645.1 382 517 +
ChrX	stalkie_big_nohaplotig	CDS	82785009	82785076	.	+	2	Parent=FBgn0028645.1.mrna1;Target=FBgn0028645.1 518 585 +
ChrX	gffcl	locus	82492895	82493845	.	+	.	ID=RLOC_00004497;geneIDs=comp155685_c0_seq1.path1;transcripts=comp155685_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82492895	82493845	.	+	.	ID=comp155685_c0_seq1.mrna1;geneID=comp155685_c0_seq1.path1;Name=comp155685_c0_seq1;Dir=indeterminatecoverage=97.9;identity=99.4;matches=945;mismatches=6;indels=0;unknowns=0;Target=comp155685_c0_seq1 970 20 .;CDS_Target=comp155685_c0_seq1 437 315 .;locus=RLOC_00004497
ChrX	stalkie_big_nohaplotig	exon	82492895	82493845	99	+	.	Parent=comp155685_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	82493190	82493312	.	+	0	Parent=comp155685_c0_seq1.mrna1
ChrX	gffcl	locus	82530978	82531670	.	-	.	ID=RLOC_00004498;geneIDs=comp148151_c0_seq1.path1;transcripts=comp148151_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82530978	82531670	.	-	.	ID=comp148151_c0_seq1.mrna1;geneID=comp148151_c0_seq1.path1;Name=comp148151_c0_seq1;Dir=sensecoverage=98.6;identity=99.8;matches=560;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004498
ChrX	stalkie_big_nohaplotig	exon	82530978	82531214	100	-	.	Parent=comp148151_c0_seq1.mrna1;Target=comp148151_c0_seq1 332 568 +
ChrX	stalkie_big_nohaplotig	exon	82531275	82531436	100	-	.	Parent=comp148151_c0_seq1.mrna1;Target=comp148151_c0_seq1 170 331 +
ChrX	stalkie_big_nohaplotig	exon	82531509	82531670	99	-	.	Parent=comp148151_c0_seq1.mrna1;Target=comp148151_c0_seq1 8 169 +
ChrX	stalkie_big_nohaplotig	CDS	82531278	82531436	.	-	0	Parent=comp148151_c0_seq1.mrna1;Target=comp148151_c0_seq1 170 328 +
ChrX	stalkie_big_nohaplotig	CDS	82531509	82531565	.	-	0	Parent=comp148151_c0_seq1.mrna1;Target=comp148151_c0_seq1 113 169 +
ChrX	gffcl	locus	82552817	82553620	.	-	.	ID=RLOC_00004499;geneIDs=comp146484_c0_seq1.path2;transcripts=comp146484_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	82552817	82553620	.	-	.	ID=comp146484_c0_seq1.mrna2;geneID=comp146484_c0_seq1.path2;Name=comp146484_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=369;mismatches=2;indels=0;unknowns=0;Target=comp146484_c0_seq1 191 301 .;locus=RLOC_00004499
ChrX	stalkie_big_nohaplotig	exon	82552817	82552883	97	-	.	Parent=comp146484_c0_seq1.mrna2;Target=comp146484_c0_seq1 1 67 -
ChrX	stalkie_big_nohaplotig	exon	82553317	82553620	100	-	.	Parent=comp146484_c0_seq1.mrna2;Target=comp146484_c0_seq1 68 371 -
ChrX	stalkie_big_nohaplotig	CDS	82553440	82553550	.	-	0	Parent=comp146484_c0_seq1.mrna2
ChrX	gffcl	locus	82572917	82574709	.	+	.	ID=RLOC_00004500;geneIDs=comp163336_c0_seq1.path1;transcripts=comp163336_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82572917	82574709	.	+	.	ID=comp163336_c0_seq1.mrna1;geneID=comp163336_c0_seq1.path1;Name=comp163336_c0_seq1;Dir=sensecoverage=94.8;identity=93.1;matches=1615;mismatches=70;indels=50;unknowns=0;locus=RLOC_00004500
ChrX	stalkie_big_nohaplotig	exon	82572917	82573139	98	+	.	Parent=comp163336_c0_seq1.mrna1;Target=comp163336_c0_seq1 56 279 +
ChrX	stalkie_big_nohaplotig	exon	82573214	82573696	95	+	.	Parent=comp163336_c0_seq1.mrna1;Target=comp163336_c0_seq1 280 763 +
ChrX	stalkie_big_nohaplotig	exon	82573705	82573936	88	+	.	Parent=comp163336_c0_seq1.mrna1;Target=comp163336_c0_seq1 808 1027 +
ChrX	stalkie_big_nohaplotig	exon	82573947	82574709	91	+	.	Parent=comp163336_c0_seq1.mrna1;Target=comp163336_c0_seq1 1056 1846 +
ChrX	stalkie_big_nohaplotig	CDS	82573101	82573139	.	+	0	Parent=comp163336_c0_seq1.mrna1;Target=comp163336_c0_seq1 241 279 +
ChrX	stalkie_big_nohaplotig	CDS	82573214	82573566	.	+	0	Parent=comp163336_c0_seq1.mrna1;Target=comp163336_c0_seq1 280 633 +
ChrX	gffcl	locus	82608695	82609687	.	-	.	ID=RLOC_00004501;geneIDs=ORF2574.path1;transcripts=ORF2574.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82608695	82609687	.	-	.	ID=ORF2574.mrna1;geneID=ORF2574.path1;Name=ORF2574;Dir=sensecoverage=100.0;identity=99.4;matches=835;mismatches=5;indels=0;unknowns=0;locus=RLOC_00004501
ChrX	stalkie_big_nohaplotig	exon	82608695	82609450	99	-	.	Parent=ORF2574.mrna1;Target=ORF2574 85 840 +
ChrX	stalkie_big_nohaplotig	exon	82609604	82609687	100	-	.	Parent=ORF2574.mrna1;Target=ORF2574 1 84 +
ChrX	stalkie_big_nohaplotig	CDS	82608695	82609450	.	-	0	Parent=ORF2574.mrna1;Target=ORF2574 85 840 +
ChrX	stalkie_big_nohaplotig	CDS	82609604	82609687	.	-	0	Parent=ORF2574.mrna1;Target=ORF2574 1 84 +
ChrX	gffcl	locus	82612416	82612837	.	+	.	ID=RLOC_00004502;geneIDs=comp150525_c0_seq1.path1;transcripts=comp150525_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82612416	82612837	.	+	.	ID=comp150525_c0_seq1.mrna1;geneID=comp150525_c0_seq1.path1;Name=comp150525_c0_seq1;Dir=indeterminatecoverage=60.6;identity=100.0;matches=422;mismatches=0;indels=0;unknowns=0;Target=comp150525_c0_seq1 424 3 .;CDS_Target=comp150525_c0_seq1 235 128 .;locus=RLOC_00004502
ChrX	stalkie_big_nohaplotig	exon	82612416	82612837	100	+	.	Parent=comp150525_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	82612541	82612648	.	+	0	Parent=comp150525_c0_seq1.mrna1
ChrX	gffcl	locus	82672739	82677729	.	-	.	ID=RLOC_00004503;geneIDs=comp160347_c0_seq1.path1;transcripts=comp160347_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82672739	82677729	.	-	.	ID=comp160347_c0_seq1.mrna1;geneID=comp160347_c0_seq1.path1;Name=comp160347_c0_seq1;Dir=sensecoverage=99.7;identity=99.9;matches=2766;mismatches=2;indels=0;unknowns=0;locus=RLOC_00004503
ChrX	stalkie_big_nohaplotig	exon	82672739	82673226	99	-	.	Parent=comp160347_c0_seq1.mrna1;Target=comp160347_c0_seq1 2289 2776 +
ChrX	stalkie_big_nohaplotig	exon	82673290	82673923	100	-	.	Parent=comp160347_c0_seq1.mrna1;Target=comp160347_c0_seq1 1655 2288 +
ChrX	stalkie_big_nohaplotig	exon	82673976	82674461	100	-	.	Parent=comp160347_c0_seq1.mrna1;Target=comp160347_c0_seq1 1169 1654 +
ChrX	stalkie_big_nohaplotig	exon	82675187	82675402	100	-	.	Parent=comp160347_c0_seq1.mrna1;Target=comp160347_c0_seq1 953 1168 +
ChrX	stalkie_big_nohaplotig	exon	82675465	82675897	100	-	.	Parent=comp160347_c0_seq1.mrna1;Target=comp160347_c0_seq1 520 952 +
ChrX	stalkie_big_nohaplotig	exon	82675950	82676065	100	-	.	Parent=comp160347_c0_seq1.mrna1;Target=comp160347_c0_seq1 404 519 +
ChrX	stalkie_big_nohaplotig	exon	82677160	82677270	100	-	.	Parent=comp160347_c0_seq1.mrna1;Target=comp160347_c0_seq1 293 403 +
ChrX	stalkie_big_nohaplotig	exon	82677330	82677371	100	-	.	Parent=comp160347_c0_seq1.mrna1;Target=comp160347_c0_seq1 251 292 +
ChrX	stalkie_big_nohaplotig	exon	82677428	82677514	100	-	.	Parent=comp160347_c0_seq1.mrna1;Target=comp160347_c0_seq1 164 250 +
ChrX	stalkie_big_nohaplotig	exon	82677575	82677729	100	-	.	Parent=comp160347_c0_seq1.mrna1;Target=comp160347_c0_seq1 9 163 +
ChrX	stalkie_big_nohaplotig	CDS	82675847	82675897	.	-	0	Parent=comp160347_c0_seq1.mrna1;Target=comp160347_c0_seq1 520 570 +
ChrX	stalkie_big_nohaplotig	CDS	82675950	82676065	.	-	2	Parent=comp160347_c0_seq1.mrna1;Target=comp160347_c0_seq1 404 519 +
ChrX	stalkie_big_nohaplotig	CDS	82677160	82677270	.	-	2	Parent=comp160347_c0_seq1.mrna1;Target=comp160347_c0_seq1 293 403 +
ChrX	stalkie_big_nohaplotig	CDS	82677330	82677371	.	-	2	Parent=comp160347_c0_seq1.mrna1;Target=comp160347_c0_seq1 251 292 +
ChrX	stalkie_big_nohaplotig	CDS	82677428	82677514	.	-	2	Parent=comp160347_c0_seq1.mrna1;Target=comp160347_c0_seq1 164 250 +
ChrX	stalkie_big_nohaplotig	CDS	82677575	82677602	.	-	0	Parent=comp160347_c0_seq1.mrna1;Target=comp160347_c0_seq1 136 163 +
ChrX	gffcl	locus	82674639	82674934	.	+	.	ID=RLOC_00004504;geneIDs=comp129783_c0_seq1.path1;transcripts=comp129783_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82674639	82674934	.	+	.	ID=comp129783_c0_seq1.mrna1;geneID=comp129783_c0_seq1.path1;Name=comp129783_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=296;mismatches=0;indels=0;unknowns=0;Target=comp129783_c0_seq1 296 1 .;CDS_Target=comp129783_c0_seq1 294 169 .;locus=RLOC_00004504
ChrX	stalkie_big_nohaplotig	exon	82674639	82674934	100	+	.	Parent=comp129783_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	82674807	82674932	.	+	0	Parent=comp129783_c0_seq1.mrna1
ChrX	gffcl	locus	82747840	84703342	.	-	.	ID=RLOC_00004505;geneIDs=comp148771_c0_seq1.path1;transcripts=comp148771_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82747840	84703342	.	-	.	ID=comp148771_c0_seq1.mrna1;geneID=comp148771_c0_seq1.path1;Name=comp148771_c0_seq1;Dir=sensecoverage=83.3;identity=97.5;matches=774;mismatches=14;indels=6;unknowns=0;locus=RLOC_00004505
ChrX	stalkie_big_nohaplotig	exon	82747840	82747846	100	-	.	Parent=comp148771_c0_seq1.mrna1;Target=comp148771_c0_seq1 846 852 +
ChrX	stalkie_big_nohaplotig	exon	82751970	82751973	100	-	.	Parent=comp148771_c0_seq1.mrna1;Target=comp148771_c0_seq1 842 845 +
ChrX	stalkie_big_nohaplotig	exon	82757987	82757992	100	-	.	Parent=comp148771_c0_seq1.mrna1;Target=comp148771_c0_seq1 836 841 +
ChrX	stalkie_big_nohaplotig	exon	82760953	82760955	100	-	.	Parent=comp148771_c0_seq1.mrna1;Target=comp148771_c0_seq1 833 835 +
ChrX	stalkie_big_nohaplotig	exon	82771929	82771937	100	-	.	Parent=comp148771_c0_seq1.mrna1;Target=comp148771_c0_seq1 824 832 +
ChrX	stalkie_big_nohaplotig	exon	82786361	82786372	75	-	.	Parent=comp148771_c0_seq1.mrna1;Target=comp148771_c0_seq1 812 823 +
ChrX	stalkie_big_nohaplotig	exon	82790929	82790958	58	-	.	Parent=comp148771_c0_seq1.mrna1;Target=comp148771_c0_seq1 780 811 +
ChrX	stalkie_big_nohaplotig	exon	82793235	82793243	100	-	.	Parent=comp148771_c0_seq1.mrna1;Target=comp148771_c0_seq1 771 779 +
ChrX	stalkie_big_nohaplotig	exon	82793250	82793260	100	-	.	Parent=comp148771_c0_seq1.mrna1;Target=comp148771_c0_seq1 711 721 +
ChrX	stalkie_big_nohaplotig	exon	84701722	84701875	100	-	.	Parent=comp148771_c0_seq1.mrna1;Target=comp148771_c0_seq1 557 710 +
ChrX	stalkie_big_nohaplotig	exon	84701927	84702165	100	-	.	Parent=comp148771_c0_seq1.mrna1;Target=comp148771_c0_seq1 318 556 +
ChrX	stalkie_big_nohaplotig	exon	84702983	84703060	100	-	.	Parent=comp148771_c0_seq1.mrna1;Target=comp148771_c0_seq1 240 317 +
ChrX	stalkie_big_nohaplotig	exon	84703115	84703342	98	-	.	Parent=comp148771_c0_seq1.mrna1;Target=comp148771_c0_seq1 12 239 +
ChrX	stalkie_big_nohaplotig	CDS	84702053	84702165	.	-	2	Parent=comp148771_c0_seq1.mrna1;Target=comp148771_c0_seq1 318 430 +
ChrX	stalkie_big_nohaplotig	CDS	84702983	84703060	.	-	2	Parent=comp148771_c0_seq1.mrna1;Target=comp148771_c0_seq1 240 317 +
ChrX	stalkie_big_nohaplotig	CDS	84703115	84703166	.	-	0	Parent=comp148771_c0_seq1.mrna1;Target=comp148771_c0_seq1 188 239 +
ChrX	gffcl	locus	82763038	82763283	.	-	.	ID=RLOC_00004506;geneIDs=comp148998_c0_seq1.path1;transcripts=comp148998_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82763038	82763283	.	-	.	ID=comp148998_c0_seq1.mrna1;geneID=comp148998_c0_seq1.path1;Name=comp148998_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=241;mismatches=5;indels=0;unknowns=0;Target=comp148998_c0_seq1 246 1 .;CDS_Target=comp148998_c0_seq1 48 1 .;locus=RLOC_00004506
ChrX	stalkie_big_nohaplotig	exon	82763038	82763283	97	-	.	Parent=comp148998_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	82763236	82763283	.	-	0	Parent=comp148998_c0_seq1.mrna1
ChrX	gffcl	locus	82793151	82813984	.	+	.	ID=RLOC_00004507;geneIDs=comp157403_c0_seq1.path1;transcripts=comp157403_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82793151	82813984	.	+	.	ID=comp157403_c0_seq1.mrna1;geneID=comp157403_c0_seq1.path1;Name=comp157403_c0_seq1;Dir=sensecoverage=99.7;identity=99.8;matches=1030;mismatches=2;indels=0;unknowns=0;locus=RLOC_00004507
ChrX	stalkie_big_nohaplotig	exon	82793151	82793422	100	+	.	Parent=comp157403_c0_seq1.mrna1;Target=comp157403_c0_seq1 2 273 +
ChrX	stalkie_big_nohaplotig	exon	82795294	82795416	100	+	.	Parent=comp157403_c0_seq1.mrna1;Target=comp157403_c0_seq1 274 396 +
ChrX	stalkie_big_nohaplotig	exon	82796508	82796673	100	+	.	Parent=comp157403_c0_seq1.mrna1;Target=comp157403_c0_seq1 397 562 +
ChrX	stalkie_big_nohaplotig	exon	82813514	82813984	99	+	.	Parent=comp157403_c0_seq1.mrna1;Target=comp157403_c0_seq1 563 1033 +
ChrX	stalkie_big_nohaplotig	CDS	82793366	82793422	.	+	0	Parent=comp157403_c0_seq1.mrna1;Target=comp157403_c0_seq1 217 273 +
ChrX	stalkie_big_nohaplotig	CDS	82795294	82795416	.	+	0	Parent=comp157403_c0_seq1.mrna1;Target=comp157403_c0_seq1 274 396 +
ChrX	stalkie_big_nohaplotig	CDS	82796508	82796673	.	+	0	Parent=comp157403_c0_seq1.mrna1;Target=comp157403_c0_seq1 397 562 +
ChrX	stalkie_big_nohaplotig	CDS	82813514	82813803	.	+	2	Parent=comp157403_c0_seq1.mrna1;Target=comp157403_c0_seq1 563 852 +
ChrX	gffcl	locus	82814007	82814760	.	+	.	ID=RLOC_00004508;geneIDs=comp143175_c0_seq1.path1;transcripts=comp143175_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82814007	82814760	.	+	.	ID=comp143175_c0_seq1.mrna1;geneID=comp143175_c0_seq1.path1;Name=comp143175_c0_seq1;Dir=indeterminatecoverage=96.9;identity=99.3;matches=753;mismatches=1;indels=4;unknowns=0;Target=comp143175_c0_seq1 758 1 .;CDS_Target=comp143175_c0_seq1 188 102 .;locus=RLOC_00004508
ChrX	stalkie_big_nohaplotig	exon	82814007	82814760	99	+	.	Parent=comp143175_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	82814108	82814194	.	+	0	Parent=comp143175_c0_seq1.mrna1
ChrX	gffcl	locus	82837894	82838558	.	+	.	ID=RLOC_00004509;geneIDs=FBgn0030722.3.path1;transcripts=FBgn0030722.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82837894	82838558	.	+	.	ID=FBgn0030722.3.mrna1;geneID=FBgn0030722.3.path1;Name=FBgn0030722.3;Dir=indeterminatecoverage=100.0;identity=99.8;matches=665;mismatches=0;indels=1;unknowns=0;Target=FBgn0030722.3 666 1 .;CDS_Target=FBgn0030722.3 44 3 .;locus=RLOC_00004509
ChrX	stalkie_big_nohaplotig	exon	82837894	82838558	99	+	.	Parent=FBgn0030722.3.mrna1
ChrX	stalkie_big_nohaplotig	CDS	82837896	82837936	.	+	0	Parent=FBgn0030722.3.mrna1
ChrX	gffcl	locus	82872433	82873183	.	+	.	ID=RLOC_00004510;geneIDs=comp152587_c0_seq1.path1;transcripts=comp152587_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82872433	82873183	.	+	.	ID=comp152587_c0_seq1.mrna1;geneID=comp152587_c0_seq1.path1;Name=comp152587_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.2;matches=732;mismatches=19;indels=10;unknowns=0;Target=comp152587_c0_seq1 761 1 .;CDS_Target=comp152587_c0_seq1 450 328 .;locus=RLOC_00004510
ChrX	stalkie_big_nohaplotig	exon	82872433	82873183	96	+	.	Parent=comp152587_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	82872760	82872882	.	+	0	Parent=comp152587_c0_seq1.mrna1
ChrX	gffcl	locus	82873376	82883341	.	-	.	ID=RLOC_00004511;geneIDs=FBgn0014127.2.path1;transcripts=FBgn0014127.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82873376	82883341	.	-	.	ID=FBgn0014127.2.mrna1;geneID=FBgn0014127.2.path1;Name=FBgn0014127.2;Dir=sensecoverage=100.0;identity=98.8;matches=1369;mismatches=17;indels=0;unknowns=0;locus=RLOC_00004511
ChrX	stalkie_big_nohaplotig	exon	82873376	82873762	98	-	.	Parent=FBgn0014127.2.mrna1;Target=FBgn0014127.2 1000 1386 +
ChrX	stalkie_big_nohaplotig	exon	82880830	82881179	97	-	.	Parent=FBgn0014127.2.mrna1;Target=FBgn0014127.2 650 999 +
ChrX	stalkie_big_nohaplotig	exon	82882693	82883341	99	-	.	Parent=FBgn0014127.2.mrna1;Target=FBgn0014127.2 1 649 +
ChrX	stalkie_big_nohaplotig	CDS	82873376	82873762	.	-	0	Parent=FBgn0014127.2.mrna1;Target=FBgn0014127.2 1000 1386 +
ChrX	stalkie_big_nohaplotig	CDS	82880830	82881179	.	-	2	Parent=FBgn0014127.2.mrna1;Target=FBgn0014127.2 650 999 +
ChrX	stalkie_big_nohaplotig	CDS	82882693	82883341	.	-	0	Parent=FBgn0014127.2.mrna1;Target=FBgn0014127.2 1 649 +
ChrX	gffcl	locus	82945621	82946451	.	-	.	ID=RLOC_00004512;geneIDs=comp78199_c0_seq1.path1;transcripts=comp78199_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82945621	82946451	.	-	.	ID=comp78199_c0_seq1.mrna1;geneID=comp78199_c0_seq1.path1;Name=comp78199_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=831;mismatches=0;indels=0;unknowns=0;Target=comp78199_c0_seq1 831 1 .;CDS_Target=comp78199_c0_seq1 237 139 .;locus=RLOC_00004512
ChrX	stalkie_big_nohaplotig	exon	82945621	82946451	100	-	.	Parent=comp78199_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	82946215	82946313	.	-	0	Parent=comp78199_c0_seq1.mrna1
ChrX	gffcl	locus	82948341	82949205	.	+	.	ID=RLOC_00004513;geneIDs=comp134675_c0_seq1.path1;transcripts=comp134675_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82948341	82949205	.	+	.	ID=comp134675_c0_seq1.mrna1;geneID=comp134675_c0_seq1.path1;Name=comp134675_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=865;mismatches=0;indels=0;unknowns=0;Target=comp134675_c0_seq1 866 2 .;CDS_Target=comp134675_c0_seq1 314 195 .;locus=RLOC_00004513
ChrX	stalkie_big_nohaplotig	exon	82948341	82949205	100	+	.	Parent=comp134675_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	82948534	82948653	.	+	0	Parent=comp134675_c0_seq1.mrna1
ChrX	gffcl	locus	82960367	82961438	.	-	.	ID=RLOC_00004514;geneIDs=comp149860_c0_seq1.path1;transcripts=comp149860_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82960367	82961438	.	-	.	ID=comp149860_c0_seq1.mrna1;geneID=comp149860_c0_seq1.path1;Name=comp149860_c0_seq1;Dir=sensecoverage=98.4;identity=97.4;matches=757;mismatches=17;indels=3;unknowns=0;locus=RLOC_00004514
ChrX	stalkie_big_nohaplotig	exon	82960367	82960748	99	-	.	Parent=comp149860_c0_seq1.mrna1;Target=comp149860_c0_seq1 395 776 +
ChrX	stalkie_big_nohaplotig	exon	82960819	82960968	90	-	.	Parent=comp149860_c0_seq1.mrna1;Target=comp149860_c0_seq1 246 394 +
ChrX	stalkie_big_nohaplotig	exon	82961041	82961192	98	-	.	Parent=comp149860_c0_seq1.mrna1;Target=comp149860_c0_seq1 94 245 +
ChrX	stalkie_big_nohaplotig	exon	82961348	82961438	96	-	.	Parent=comp149860_c0_seq1.mrna1;Target=comp149860_c0_seq1 1 93 +
ChrX	stalkie_big_nohaplotig	CDS	82960874	82960968	.	-	1	Parent=comp149860_c0_seq1.mrna1;Target=comp149860_c0_seq1 246 339 +
ChrX	stalkie_big_nohaplotig	CDS	82961041	82961177	.	-	0	Parent=comp149860_c0_seq1.mrna1;Target=comp149860_c0_seq1 109 245 +
ChrX	gffcl	locus	82975215	82983179	.	-	.	ID=RLOC_00004515;geneIDs=comp150574_c1_seq1.path2;transcripts=comp150574_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	82975215	82983179	.	-	.	ID=comp150574_c1_seq1.mrna2;geneID=comp150574_c1_seq1.path2;Name=comp150574_c1_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=678;mismatches=5;indels=0;unknowns=0;locus=RLOC_00004515
ChrX	stalkie_big_nohaplotig	exon	82975215	82975309	100	-	.	Parent=comp150574_c1_seq1.mrna2;Target=comp150574_c1_seq1 589 683 +
ChrX	stalkie_big_nohaplotig	exon	82975369	82975502	100	-	.	Parent=comp150574_c1_seq1.mrna2;Target=comp150574_c1_seq1 455 588 +
ChrX	stalkie_big_nohaplotig	exon	82975938	82976117	100	-	.	Parent=comp150574_c1_seq1.mrna2;Target=comp150574_c1_seq1 275 454 +
ChrX	stalkie_big_nohaplotig	exon	82982906	82983179	98	-	.	Parent=comp150574_c1_seq1.mrna2;Target=comp150574_c1_seq1 1 274 +
ChrX	stalkie_big_nohaplotig	CDS	82975215	82975309	.	-	2	Parent=comp150574_c1_seq1.mrna2;Target=comp150574_c1_seq1 589 683 +
ChrX	stalkie_big_nohaplotig	CDS	82975369	82975502	.	-	1	Parent=comp150574_c1_seq1.mrna2;Target=comp150574_c1_seq1 455 588 +
ChrX	stalkie_big_nohaplotig	CDS	82975938	82976110	.	-	0	Parent=comp150574_c1_seq1.mrna2;Target=comp150574_c1_seq1 282 454 +
ChrX	gffcl	locus	82992332	82994209	.	+	.	ID=RLOC_00004516;geneIDs=comp154910_c0_seq1.path1;transcripts=comp154910_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	82992332	82994209	.	+	.	ID=comp154910_c0_seq1.mrna1;geneID=comp154910_c0_seq1.path1;Name=comp154910_c0_seq1;Dir=antisensecoverage=98.8;identity=99.6;matches=1590;mismatches=2;indels=5;unknowns=0;locus=RLOC_00004516
ChrX	stalkie_big_nohaplotig	exon	82992332	82993492	99	+	.	Parent=comp154910_c0_seq1.mrna1;Target=comp154910_c0_seq1 454 1616 -
ChrX	stalkie_big_nohaplotig	exon	82993614	82993814	100	+	.	Parent=comp154910_c0_seq1.mrna1;Target=comp154910_c0_seq1 253 453 -
ChrX	stalkie_big_nohaplotig	exon	82993979	82994209	98	+	.	Parent=comp154910_c0_seq1.mrna1;Target=comp154910_c0_seq1 21 252 -
ChrX	stalkie_big_nohaplotig	CDS	82993183	82993492	.	+	0	Parent=comp154910_c0_seq1.mrna1;Target=comp154910_c0_seq1 454 763 .
ChrX	stalkie_big_nohaplotig	CDS	82993614	82993750	.	+	2	Parent=comp154910_c0_seq1.mrna1;Target=comp154910_c0_seq1 317 453 .
ChrX	gffcl	locus	83052058	83052924	.	-	.	ID=RLOC_00004517;geneIDs=ORF2393.path1;transcripts=ORF2393.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83052058	83052924	.	-	.	ID=ORF2393.mrna1;geneID=ORF2393.path1;Name=ORF2393;Dir=indeterminatecoverage=100.0;identity=99.9;matches=866;mismatches=1;indels=0;unknowns=0;Target=ORF2393 867 1 .;locus=RLOC_00004517
ChrX	stalkie_big_nohaplotig	exon	83052058	83052924	99	-	.	Parent=ORF2393.mrna1
ChrX	stalkie_big_nohaplotig	CDS	83052058	83052924	.	-	0	Parent=ORF2393.mrna1
ChrX	gffcl	locus	83130652	83131097	.	-	.	ID=RLOC_00004518;geneIDs=comp150036_c1_seq1.path1;transcripts=comp150036_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83130652	83131097	.	-	.	ID=comp150036_c1_seq1.mrna1;geneID=comp150036_c1_seq1.path1;Name=comp150036_c1_seq1;Dir=indeterminatecoverage=99.3;identity=99.6;matches=444;mismatches=2;indels=0;unknowns=0;Target=comp150036_c1_seq1 448 3 .;CDS_Target=comp150036_c1_seq1 216 82 .;locus=RLOC_00004518
ChrX	stalkie_big_nohaplotig	exon	83130652	83131097	99	-	.	Parent=comp150036_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	83130884	83131018	.	-	0	Parent=comp150036_c1_seq1.mrna1
ChrX	gffcl	locus	83191963	83200535	.	+	.	ID=RLOC_00004520;geneIDs=comp150574_c1_seq1.path1;transcripts=comp150574_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83191963	83200535	.	+	.	ID=comp150574_c1_seq1.mrna1;geneID=comp150574_c1_seq1.path1;Name=comp150574_c1_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=682;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004520
ChrX	stalkie_big_nohaplotig	exon	83191963	83192236	100	+	.	Parent=comp150574_c1_seq1.mrna1;Target=comp150574_c1_seq1 1 274 +
ChrX	stalkie_big_nohaplotig	exon	83199633	83199812	99	+	.	Parent=comp150574_c1_seq1.mrna1;Target=comp150574_c1_seq1 275 454 +
ChrX	stalkie_big_nohaplotig	exon	83200248	83200381	100	+	.	Parent=comp150574_c1_seq1.mrna1;Target=comp150574_c1_seq1 455 588 +
ChrX	stalkie_big_nohaplotig	exon	83200441	83200535	100	+	.	Parent=comp150574_c1_seq1.mrna1;Target=comp150574_c1_seq1 589 683 +
ChrX	stalkie_big_nohaplotig	CDS	83199640	83199812	.	+	0	Parent=comp150574_c1_seq1.mrna1;Target=comp150574_c1_seq1 282 454 +
ChrX	stalkie_big_nohaplotig	CDS	83200248	83200381	.	+	1	Parent=comp150574_c1_seq1.mrna1;Target=comp150574_c1_seq1 455 588 +
ChrX	stalkie_big_nohaplotig	CDS	83200441	83200535	.	+	2	Parent=comp150574_c1_seq1.mrna1;Target=comp150574_c1_seq1 589 683 +
ChrX	gffcl	locus	83258621	83259417	.	-	.	ID=RLOC_00004521;geneIDs=comp151583_c0_seq1.path1;transcripts=comp151583_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83258621	83259417	.	-	.	ID=comp151583_c0_seq1.mrna1;geneID=comp151583_c0_seq1.path1;Name=comp151583_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.1;matches=790;mismatches=7;indels=0;unknowns=0;Target=comp151583_c0_seq1 798 2 .;CDS_Target=comp151583_c0_seq1 632 75 .;locus=RLOC_00004521
ChrX	stalkie_big_nohaplotig	exon	83258621	83259417	99	-	.	Parent=comp151583_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	83258787	83259344	.	-	0	Parent=comp151583_c0_seq1.mrna1
ChrX	gffcl	locus	83272043	83274105	.	+	.	ID=RLOC_00004523;geneIDs=comp151264_c0_seq1.path1;transcripts=comp151264_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83272043	83274105	.	+	.	ID=comp151264_c0_seq1.mrna1;geneID=comp151264_c0_seq1.path1;Name=comp151264_c0_seq1;Dir=sensecoverage=96.3;identity=99.1;matches=572;mismatches=3;indels=2;unknowns=0;locus=RLOC_00004523
ChrX	stalkie_big_nohaplotig	exon	83272043	83272397	98	+	.	Parent=comp151264_c0_seq1.mrna1;Target=comp151264_c0_seq1 23 377 +
ChrX	stalkie_big_nohaplotig	exon	83272469	83272561	100	+	.	Parent=comp151264_c0_seq1.mrna1;Target=comp151264_c0_seq1 378 470 +
ChrX	stalkie_big_nohaplotig	exon	83273978	83274105	100	+	.	Parent=comp151264_c0_seq1.mrna1;Target=comp151264_c0_seq1 471 598 +
ChrX	stalkie_big_nohaplotig	CDS	83272337	83272397	.	+	0	Parent=comp151264_c0_seq1.mrna1;Target=comp151264_c0_seq1 317 377 +
ChrX	stalkie_big_nohaplotig	CDS	83272469	83272561	.	+	2	Parent=comp151264_c0_seq1.mrna1;Target=comp151264_c0_seq1 378 470 +
ChrX	stalkie_big_nohaplotig	CDS	83273978	83274000	.	+	2	Parent=comp151264_c0_seq1.mrna1;Target=comp151264_c0_seq1 471 493 +
ChrX	gffcl	locus	83346503	83347074	.	+	.	ID=RLOC_00004524;geneIDs=comp135640_c0_seq1.path1;transcripts=comp135640_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83346503	83347074	.	+	.	ID=comp135640_c0_seq1.mrna1;geneID=comp135640_c0_seq1.path1;Name=comp135640_c0_seq1;Dir=sensecoverage=97.7;identity=99.4;matches=509;mismatches=2;indels=1;unknowns=0;locus=RLOC_00004524
ChrX	stalkie_big_nohaplotig	exon	83346503	83346696	99	+	.	Parent=comp135640_c0_seq1.mrna1;Target=comp135640_c0_seq1 13 207 +
ChrX	stalkie_big_nohaplotig	exon	83346758	83347074	99	+	.	Parent=comp135640_c0_seq1.mrna1;Target=comp135640_c0_seq1 208 524 +
ChrX	stalkie_big_nohaplotig	CDS	83346640	83346696	.	+	0	Parent=comp135640_c0_seq1.mrna1;Target=comp135640_c0_seq1 151 207 +
ChrX	stalkie_big_nohaplotig	CDS	83346758	83346925	.	+	0	Parent=comp135640_c0_seq1.mrna1;Target=comp135640_c0_seq1 208 375 +
ChrX	gffcl	locus	83366416	83367081	.	-	.	ID=RLOC_00004525;geneIDs=FBgn0030722.2.path1;transcripts=FBgn0030722.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83366416	83367081	.	-	.	ID=FBgn0030722.2.mrna1;geneID=FBgn0030722.2.path1;Name=FBgn0030722.2;Dir=indeterminatecoverage=100.0;identity=99.8;matches=665;mismatches=1;indels=0;unknowns=0;Target=FBgn0030722.2 666 1 .;locus=RLOC_00004525
ChrX	stalkie_big_nohaplotig	exon	83366416	83367081	99	-	.	Parent=FBgn0030722.2.mrna1
ChrX	stalkie_big_nohaplotig	CDS	83366416	83367081	.	-	0	Parent=FBgn0030722.2.mrna1
ChrX	gffcl	locus	83453956	83460356	.	+	.	ID=RLOC_00004526;geneIDs=FBgn0051826.1.path1;transcripts=FBgn0051826.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83453956	83460356	.	+	.	ID=FBgn0051826.1.mrna1;geneID=FBgn0051826.1.path1;Name=FBgn0051826.1;Dir=sensecoverage=100.0;identity=100.0;matches=831;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004526
ChrX	stalkie_big_nohaplotig	exon	83453956	83454055	100	+	.	Parent=FBgn0051826.1.mrna1;Target=FBgn0051826.1 1 100 +
ChrX	stalkie_big_nohaplotig	exon	83455979	83456224	100	+	.	Parent=FBgn0051826.1.mrna1;Target=FBgn0051826.1 101 346 +
ChrX	stalkie_big_nohaplotig	exon	83456294	83456382	100	+	.	Parent=FBgn0051826.1.mrna1;Target=FBgn0051826.1 347 435 +
ChrX	stalkie_big_nohaplotig	exon	83456485	83456525	100	+	.	Parent=FBgn0051826.1.mrna1;Target=FBgn0051826.1 436 476 +
ChrX	stalkie_big_nohaplotig	exon	83458998	83459172	100	+	.	Parent=FBgn0051826.1.mrna1;Target=FBgn0051826.1 477 651 +
ChrX	stalkie_big_nohaplotig	exon	83460177	83460356	100	+	.	Parent=FBgn0051826.1.mrna1;Target=FBgn0051826.1 652 831 +
ChrX	stalkie_big_nohaplotig	CDS	83453956	83454055	.	+	0	Parent=FBgn0051826.1.mrna1;Target=FBgn0051826.1 1 100 +
ChrX	stalkie_big_nohaplotig	CDS	83455979	83456224	.	+	2	Parent=FBgn0051826.1.mrna1;Target=FBgn0051826.1 101 346 +
ChrX	stalkie_big_nohaplotig	CDS	83456294	83456382	.	+	2	Parent=FBgn0051826.1.mrna1;Target=FBgn0051826.1 347 435 +
ChrX	stalkie_big_nohaplotig	CDS	83456485	83456525	.	+	0	Parent=FBgn0051826.1.mrna1;Target=FBgn0051826.1 436 476 +
ChrX	stalkie_big_nohaplotig	CDS	83458998	83459172	.	+	1	Parent=FBgn0051826.1.mrna1;Target=FBgn0051826.1 477 651 +
ChrX	stalkie_big_nohaplotig	CDS	83460177	83460356	.	+	0	Parent=FBgn0051826.1.mrna1;Target=FBgn0051826.1 652 831 +
ChrX	gffcl	locus	83464153	83464862	.	-	.	ID=RLOC_00004527;geneIDs=comp135649_c0_seq1.path1;transcripts=comp135649_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83464153	83464862	.	-	.	ID=comp135649_c0_seq1.mrna1;geneID=comp135649_c0_seq1.path1;Name=comp135649_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.1;matches=682;mismatches=0;indels=28;unknowns=0;Target=comp135649_c0_seq1 683 2 .;CDS_Target=comp135649_c0_seq1 658 500 .;locus=RLOC_00004527
ChrX	stalkie_big_nohaplotig	exon	83464153	83464862	96	-	.	Parent=comp135649_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	83464178	83464336	.	-	0	Parent=comp135649_c0_seq1.mrna1
ChrX	gffcl	locus	83467707	83473201	.	-	.	ID=RLOC_00004528;geneIDs=comp157444_c0_seq1.path1;transcripts=comp157444_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83467707	83473201	.	-	.	ID=comp157444_c0_seq1.mrna1;geneID=comp157444_c0_seq1.path1;Name=comp157444_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=1591;mismatches=1;indels=0;unknowns=0;Target=comp157444_c0_seq1 1 228 +;locus=RLOC_00004528
ChrX	stalkie_big_nohaplotig	exon	83467707	83468620	99	-	.	Parent=comp157444_c0_seq1.mrna1;Target=comp157444_c0_seq1 679 1592 +
ChrX	stalkie_big_nohaplotig	exon	83470838	83471038	100	-	.	Parent=comp157444_c0_seq1.mrna1;Target=comp157444_c0_seq1 478 678 +
ChrX	stalkie_big_nohaplotig	exon	83472655	83472800	100	-	.	Parent=comp157444_c0_seq1.mrna1;Target=comp157444_c0_seq1 332 477 +
ChrX	stalkie_big_nohaplotig	exon	83472871	83473201	100	-	.	Parent=comp157444_c0_seq1.mrna1;Target=comp157444_c0_seq1 1 331 +
ChrX	stalkie_big_nohaplotig	CDS	83472974	83473201	.	-	0	Parent=comp157444_c0_seq1.mrna1
ChrX	gffcl	locus	83479736	83499953	.	+	.	ID=RLOC_00004529;geneIDs=FBgn0043456.1.path1;transcripts=FBgn0043456.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83479736	83499953	.	+	.	ID=FBgn0043456.1.mrna1;geneID=FBgn0043456.1.path1;Name=FBgn0043456.1;Dir=sensecoverage=100.0;identity=100.0;matches=1764;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004529
ChrX	stalkie_big_nohaplotig	exon	83479736	83479860	100	+	.	Parent=FBgn0043456.1.mrna1;Target=FBgn0043456.1 1 125 +
ChrX	stalkie_big_nohaplotig	exon	83480540	83480576	100	+	.	Parent=FBgn0043456.1.mrna1;Target=FBgn0043456.1 126 162 +
ChrX	stalkie_big_nohaplotig	exon	83492769	83492851	100	+	.	Parent=FBgn0043456.1.mrna1;Target=FBgn0043456.1 163 245 +
ChrX	stalkie_big_nohaplotig	exon	83494950	83495709	100	+	.	Parent=FBgn0043456.1.mrna1;Target=FBgn0043456.1 246 1005 +
ChrX	stalkie_big_nohaplotig	exon	83495828	83495938	100	+	.	Parent=FBgn0043456.1.mrna1;Target=FBgn0043456.1 1006 1116 +
ChrX	stalkie_big_nohaplotig	exon	83496598	83496741	100	+	.	Parent=FBgn0043456.1.mrna1;Target=FBgn0043456.1 1117 1260 +
ChrX	stalkie_big_nohaplotig	exon	83496812	83496938	100	+	.	Parent=FBgn0043456.1.mrna1;Target=FBgn0043456.1 1261 1387 +
ChrX	stalkie_big_nohaplotig	exon	83497757	83497846	100	+	.	Parent=FBgn0043456.1.mrna1;Target=FBgn0043456.1 1388 1477 +
ChrX	stalkie_big_nohaplotig	exon	83497996	83498085	100	+	.	Parent=FBgn0043456.1.mrna1;Target=FBgn0043456.1 1478 1567 +
ChrX	stalkie_big_nohaplotig	exon	83499757	83499953	100	+	.	Parent=FBgn0043456.1.mrna1;Target=FBgn0043456.1 1568 1764 +
ChrX	stalkie_big_nohaplotig	CDS	83479736	83479860	.	+	0	Parent=FBgn0043456.1.mrna1;Target=FBgn0043456.1 1 125 +
ChrX	stalkie_big_nohaplotig	CDS	83480540	83480576	.	+	1	Parent=FBgn0043456.1.mrna1;Target=FBgn0043456.1 126 162 +
ChrX	stalkie_big_nohaplotig	CDS	83492769	83492851	.	+	0	Parent=FBgn0043456.1.mrna1;Target=FBgn0043456.1 163 245 +
ChrX	stalkie_big_nohaplotig	CDS	83494950	83495709	.	+	1	Parent=FBgn0043456.1.mrna1;Target=FBgn0043456.1 246 1005 +
ChrX	stalkie_big_nohaplotig	CDS	83495828	83495938	.	+	0	Parent=FBgn0043456.1.mrna1;Target=FBgn0043456.1 1006 1116 +
ChrX	stalkie_big_nohaplotig	CDS	83496598	83496741	.	+	0	Parent=FBgn0043456.1.mrna1;Target=FBgn0043456.1 1117 1260 +
ChrX	stalkie_big_nohaplotig	CDS	83496812	83496938	.	+	0	Parent=FBgn0043456.1.mrna1;Target=FBgn0043456.1 1261 1387 +
ChrX	stalkie_big_nohaplotig	CDS	83497757	83497846	.	+	2	Parent=FBgn0043456.1.mrna1;Target=FBgn0043456.1 1388 1477 +
ChrX	stalkie_big_nohaplotig	CDS	83497996	83498085	.	+	2	Parent=FBgn0043456.1.mrna1;Target=FBgn0043456.1 1478 1567 +
ChrX	stalkie_big_nohaplotig	CDS	83499757	83499953	.	+	2	Parent=FBgn0043456.1.mrna1;Target=FBgn0043456.1 1568 1764 +
ChrX	gffcl	locus	83500638	83509399	.	.	.	ID=RLOC_00004530;geneIDs=comp50992_c0_seq1.path1,comp135007_c0_seq1.path1,comp154716_c0_seq1.path1,comp423601_c0_seq1.path1;transcripts=comp154716_c0_seq1.mrna1,comp135007_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83500937	83509399	.	-	.	ID=comp154716_c0_seq1.mrna1;geneID=comp154716_c0_seq1.path1;Name=comp154716_c0_seq1;Dir=indeterminatecoverage=94.5;identity=99.7;matches=1508;mismatches=3;indels=1;unknowns=0;Target=comp154716_c0_seq1 1006 878 .;locus=RLOC_00004530
ChrX	stalkie_big_nohaplotig	exon	83500937	83502433	99	-	.	Parent=comp154716_c0_seq1.mrna1;Target=comp154716_c0_seq1 1580 83 .
ChrX	stalkie_big_nohaplotig	exon	83504499	83504505	100	-	.	Parent=comp154716_c0_seq1.mrna1;Target=comp154716_c0_seq1 82 76 .
ChrX	stalkie_big_nohaplotig	exon	83509393	83509399	100	-	.	Parent=comp154716_c0_seq1.mrna1;Target=comp154716_c0_seq1 75 69 .
ChrX	stalkie_big_nohaplotig	CDS	83501511	83501638	.	-	0	Parent=comp154716_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83504639	83505599	.	+	.	ID=comp135007_c0_seq1.mrna1;geneID=comp135007_c0_seq1.path1;Name=comp135007_c0_seq1;Dir=indeterminatecoverage=96.9;identity=100.0;matches=961;mismatches=0;indels=0;unknowns=0;Target=comp135007_c0_seq1 990 30 .;CDS_Target=comp135007_c0_seq1 816 637 .;locus=RLOC_00004530
ChrX	stalkie_big_nohaplotig	exon	83504639	83505599	100	+	.	Parent=comp135007_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	83505246	83505425	.	+	0	Parent=comp135007_c0_seq1.mrna1
ChrX	gffcl	locus	83515670	83521425	.	-	.	ID=RLOC_00004531;geneIDs=comp155431_c0_seq1.path1;transcripts=comp155431_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83515670	83521425	.	-	.	ID=comp155431_c0_seq1.mrna1;geneID=comp155431_c0_seq1.path1;Name=comp155431_c0_seq1;Dir=antisensecoverage=98.5;identity=98.2;matches=1140;mismatches=2;indels=19;unknowns=0;locus=RLOC_00004531
ChrX	stalkie_big_nohaplotig	exon	83515670	83515941	100	-	.	Parent=comp155431_c0_seq1.mrna1;Target=comp155431_c0_seq1 7 278 -
ChrX	stalkie_big_nohaplotig	exon	83517364	83517855	95	-	.	Parent=comp155431_c0_seq1.mrna1;Target=comp155431_c0_seq1 279 789 -
ChrX	stalkie_big_nohaplotig	exon	83517917	83518037	100	-	.	Parent=comp155431_c0_seq1.mrna1;Target=comp155431_c0_seq1 790 910 -
ChrX	stalkie_big_nohaplotig	exon	83518129	83518210	100	-	.	Parent=comp155431_c0_seq1.mrna1;Target=comp155431_c0_seq1 911 992 -
ChrX	stalkie_big_nohaplotig	exon	83521251	83521425	100	-	.	Parent=comp155431_c0_seq1.mrna1;Target=comp155431_c0_seq1 993 1167 -
ChrX	stalkie_big_nohaplotig	CDS	83517580	83517855	.	-	0	Parent=comp155431_c0_seq1.mrna1;Target=comp155431_c0_seq1 514 789 .
ChrX	stalkie_big_nohaplotig	CDS	83517917	83518030	.	-	0	Parent=comp155431_c0_seq1.mrna1;Target=comp155431_c0_seq1 790 903 .
ChrX	gffcl	locus	83521680	83530488	.	+	.	ID=RLOC_00004532;geneIDs=comp160698_c1_seq1.path2;transcripts=comp160698_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	83521680	83530488	.	+	.	ID=comp160698_c1_seq1.mrna2;geneID=comp160698_c1_seq1.path2;Name=comp160698_c1_seq1;Dir=antisensecoverage=7.9;identity=99.7;matches=339;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004532
ChrX	stalkie_big_nohaplotig	exon	83521680	83521866	99	+	.	Parent=comp160698_c1_seq1.mrna2;Target=comp160698_c1_seq1 4105 4291 -
ChrX	stalkie_big_nohaplotig	exon	83530336	83530488	100	+	.	Parent=comp160698_c1_seq1.mrna2;Target=comp160698_c1_seq1 3952 4104 -
ChrX	gffcl	locus	83524344	83525018	.	+	.	ID=RLOC_00004533;geneIDs=comp137874_c2_seq1.path1;transcripts=comp137874_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83524344	83525018	.	+	.	ID=comp137874_c2_seq1.mrna1;geneID=comp137874_c2_seq1.path1;Name=comp137874_c2_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=675;mismatches=0;indels=0;unknowns=0;Target=comp137874_c2_seq1 675 1 .;CDS_Target=comp137874_c2_seq1 271 149 .;locus=RLOC_00004533
ChrX	stalkie_big_nohaplotig	exon	83524344	83525018	100	+	.	Parent=comp137874_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	83524492	83524614	.	+	0	Parent=comp137874_c2_seq1.mrna1
ChrX	gffcl	locus	83529552	83530310	.	-	.	ID=RLOC_00004534;geneIDs=comp151203_c1_seq1.path1;transcripts=comp151203_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83529552	83530310	.	-	.	ID=comp151203_c1_seq1.mrna1;geneID=comp151203_c1_seq1.path1;Name=comp151203_c1_seq1;Dir=indeterminatecoverage=64.2;identity=100.0;matches=697;mismatches=0;indels=0;unknowns=0;Target=comp151203_c1_seq1 377 189 .;locus=RLOC_00004534
ChrX	stalkie_big_nohaplotig	exon	83529552	83529564	100	-	.	Parent=comp151203_c1_seq1.mrna1;Target=comp151203_c1_seq1 697 685 .
ChrX	stalkie_big_nohaplotig	exon	83529627	83530310	100	-	.	Parent=comp151203_c1_seq1.mrna1;Target=comp151203_c1_seq1 684 1 .
ChrX	stalkie_big_nohaplotig	CDS	83529934	83530122	.	-	0	Parent=comp151203_c1_seq1.mrna1
ChrX	gffcl	locus	83531172	83531430	.	+	.	ID=RLOC_00004535;geneIDs=comp141270_c1_seq1.path1;transcripts=comp141270_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83531172	83531430	.	+	.	ID=comp141270_c1_seq1.mrna1;geneID=comp141270_c1_seq1.path1;Name=comp141270_c1_seq1;Dir=indeterminatecoverage=84.1;identity=99.6;matches=258;mismatches=1;indels=0;unknowns=0;Target=comp141270_c1_seq1 259 1 .;CDS_Target=comp141270_c1_seq1 79 2 .;locus=RLOC_00004535
ChrX	stalkie_big_nohaplotig	exon	83531172	83531430	99	+	.	Parent=comp141270_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	83531173	83531250	.	+	0	Parent=comp141270_c1_seq1.mrna1
ChrX	gffcl	locus	83722625	85607955	.	+	.	ID=RLOC_00004536;geneIDs=FBgn0261934.1.path1;transcripts=FBgn0261934.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83722625	85607955	.	+	.	ID=FBgn0261934.1.mrna1;geneID=FBgn0261934.1.path1;Name=FBgn0261934.1;Dir=sensecoverage=61.0;identity=99.2;matches=5199;mismatches=5;indels=37;unknowns=0;locus=RLOC_00004536
ChrX	stalkie_big_nohaplotig	exon	83722625	83723441	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 51 867 +
ChrX	stalkie_big_nohaplotig	exon	83724212	83724654	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 868 1310 +
ChrX	stalkie_big_nohaplotig	exon	83724775	83724828	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 1311 1364 +
ChrX	stalkie_big_nohaplotig	exon	83724937	83727202	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 1365 3630 +
ChrX	stalkie_big_nohaplotig	exon	83727286	83728677	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 3631 5022 +
ChrX	stalkie_big_nohaplotig	exon	85380758	85380760	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5023 5025 +
ChrX	stalkie_big_nohaplotig	exon	85393619	85393622	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5026 5029 +
ChrX	stalkie_big_nohaplotig	exon	85396740	85396750	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5030 5040 +
ChrX	stalkie_big_nohaplotig	exon	85406139	85406141	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5051 5053 +
ChrX	stalkie_big_nohaplotig	exon	85411106	85411113	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5054 5061 +
ChrX	stalkie_big_nohaplotig	exon	85414940	85414951	58	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5062 5068 +
ChrX	stalkie_big_nohaplotig	exon	85423519	85423529	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5069 5079 +
ChrX	stalkie_big_nohaplotig	exon	85430421	85430429	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5081 5089 +
ChrX	stalkie_big_nohaplotig	exon	85454770	85454774	80	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5090 5094 +
ChrX	stalkie_big_nohaplotig	exon	85462140	85462150	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5095 5105 +
ChrX	stalkie_big_nohaplotig	exon	85465121	85465123	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5111 5113 +
ChrX	stalkie_big_nohaplotig	exon	85466214	85466221	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5114 5121 +
ChrX	stalkie_big_nohaplotig	exon	85466232	85466246	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5141 5155 +
ChrX	stalkie_big_nohaplotig	exon	85472741	85472747	85	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5172 5178 +
ChrX	stalkie_big_nohaplotig	exon	85480280	85480289	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5179 5188 +
ChrX	stalkie_big_nohaplotig	exon	85489122	85489125	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5196 5199 +
ChrX	stalkie_big_nohaplotig	exon	85504585	85504596	91	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5200 5211 +
ChrX	stalkie_big_nohaplotig	exon	85537285	85537291	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5217 5223 +
ChrX	stalkie_big_nohaplotig	exon	85567133	85567135	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5224 5226 +
ChrX	stalkie_big_nohaplotig	exon	85570248	85570265	71	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5237 5256 +
ChrX	stalkie_big_nohaplotig	exon	85570850	85570890	31	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5257 5269 +
ChrX	stalkie_big_nohaplotig	exon	85570921	85570928	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5293 5300 +
ChrX	stalkie_big_nohaplotig	exon	85599503	85599510	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5305 5312 +
ChrX	stalkie_big_nohaplotig	exon	85599522	85599534	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5323 5335 +
ChrX	stalkie_big_nohaplotig	exon	85602450	85602454	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5347 5351 +
ChrX	stalkie_big_nohaplotig	exon	85603456	85603463	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5352 5359 +
ChrX	stalkie_big_nohaplotig	exon	85603496	85603499	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5408 5411 +
ChrX	stalkie_big_nohaplotig	exon	85607948	85607955	100	+	.	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5412 5419 +
ChrX	stalkie_big_nohaplotig	CDS	83722626	83723441	.	+	0	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 52 867 +
ChrX	stalkie_big_nohaplotig	CDS	83724212	83724654	.	+	0	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 868 1310 +
ChrX	stalkie_big_nohaplotig	CDS	83724775	83724828	.	+	1	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 1311 1364 +
ChrX	stalkie_big_nohaplotig	CDS	83724937	83727202	.	+	1	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 1365 3630 +
ChrX	stalkie_big_nohaplotig	CDS	83727286	83728677	.	+	0	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 3631 5022 +
ChrX	stalkie_big_nohaplotig	CDS	85380758	85380760	.	+	0	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5023 5025 +
ChrX	stalkie_big_nohaplotig	CDS	85393619	85393622	.	+	0	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5026 5029 +
ChrX	stalkie_big_nohaplotig	CDS	85396740	85396750	.	+	2	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5030 5040 +
ChrX	stalkie_big_nohaplotig	CDS	85406139	85406141	.	+	0	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5051 5053 +
ChrX	stalkie_big_nohaplotig	CDS	85411106	85411113	.	+	0	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5054 5061 +
ChrX	stalkie_big_nohaplotig	CDS	85414940	85414951	.	+	1	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5062 5068 +
ChrX	stalkie_big_nohaplotig	CDS	85423519	85423529	.	+	1	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5069 5079 +
ChrX	stalkie_big_nohaplotig	CDS	85430421	85430429	.	+	2	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5081 5089 +
ChrX	stalkie_big_nohaplotig	CDS	85454770	85454774	.	+	2	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5090 5094 +
ChrX	stalkie_big_nohaplotig	CDS	85462140	85462150	.	+	0	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5095 5105 +
ChrX	stalkie_big_nohaplotig	CDS	85465121	85465123	.	+	1	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5111 5113 +
ChrX	stalkie_big_nohaplotig	CDS	85466214	85466221	.	+	1	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5114 5121 +
ChrX	stalkie_big_nohaplotig	CDS	85466232	85466246	.	+	2	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5141 5155 +
ChrX	stalkie_big_nohaplotig	CDS	85472741	85472747	.	+	2	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5172 5178 +
ChrX	stalkie_big_nohaplotig	CDS	85480280	85480289	.	+	1	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5179 5188 +
ChrX	stalkie_big_nohaplotig	CDS	85489122	85489125	.	+	0	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5196 5199 +
ChrX	stalkie_big_nohaplotig	CDS	85504585	85504596	.	+	2	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5200 5211 +
ChrX	stalkie_big_nohaplotig	CDS	85537285	85537291	.	+	2	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5217 5223 +
ChrX	stalkie_big_nohaplotig	CDS	85567133	85567135	.	+	1	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5224 5226 +
ChrX	stalkie_big_nohaplotig	CDS	85570248	85570265	.	+	1	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5237 5256 +
ChrX	stalkie_big_nohaplotig	CDS	85570850	85570890	.	+	1	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5257 5269 +
ChrX	stalkie_big_nohaplotig	CDS	85570921	85570928	.	+	2	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5293 5300 +
ChrX	stalkie_big_nohaplotig	CDS	85599503	85599510	.	+	0	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5305 5312 +
ChrX	stalkie_big_nohaplotig	CDS	85599522	85599534	.	+	1	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5323 5335 +
ChrX	stalkie_big_nohaplotig	CDS	85602450	85602454	.	+	0	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5347 5351 +
ChrX	stalkie_big_nohaplotig	CDS	85603456	85603463	.	+	1	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5352 5359 +
ChrX	stalkie_big_nohaplotig	CDS	85603496	85603499	.	+	2	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5408 5411 +
ChrX	stalkie_big_nohaplotig	CDS	85607948	85607954	.	+	1	Parent=FBgn0261934.1.mrna1;Target=FBgn0261934.1 5412 5418 +
ChrX	gffcl	locus	83729925	83731171	.	+	.	ID=RLOC_00004537;geneIDs=FBgn0041111.path1;transcripts=FBgn0041111.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83729925	83731171	.	+	.	ID=FBgn0041111.mrna1;geneID=FBgn0041111.path1;Name=FBgn0041111;Dir=sensecoverage=100.0;identity=99.7;matches=392;mismatches=0;indels=1;unknowns=0;Target=FBgn0041111 3 83 +;locus=RLOC_00004537
ChrX	stalkie_big_nohaplotig	exon	83729925	83730043	99	+	.	Parent=FBgn0041111.mrna1;Target=FBgn0041111 1 120 +
ChrX	stalkie_big_nohaplotig	exon	83730144	83730294	100	+	.	Parent=FBgn0041111.mrna1;Target=FBgn0041111 121 271 +
ChrX	stalkie_big_nohaplotig	exon	83731050	83731171	100	+	.	Parent=FBgn0041111.mrna1;Target=FBgn0041111 272 393 +
ChrX	stalkie_big_nohaplotig	CDS	83729927	83730006	.	+	0	Parent=FBgn0041111.mrna1
ChrX	gffcl	locus	83732175	83732586	.	-	.	ID=RLOC_00004538;geneIDs=comp205570_c0_seq1.path1;transcripts=comp205570_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83732175	83732586	.	-	.	ID=comp205570_c0_seq1.mrna1;geneID=comp205570_c0_seq1.path1;Name=comp205570_c0_seq1;Dir=indeterminatecoverage=88.0;identity=100.0;matches=412;mismatches=0;indels=0;unknowns=0;Target=comp205570_c0_seq1 468 57 .;CDS_Target=comp205570_c0_seq1 265 179 .;locus=RLOC_00004538
ChrX	stalkie_big_nohaplotig	exon	83732175	83732586	100	-	.	Parent=comp205570_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	83732378	83732464	.	-	0	Parent=comp205570_c0_seq1.mrna1
ChrX	gffcl	locus	83733179	83734422	.	-	.	ID=RLOC_00004539;geneIDs=comp151325_c0_seq1.path1;transcripts=comp151325_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83733179	83734422	.	-	.	ID=comp151325_c0_seq1.mrna1;geneID=comp151325_c0_seq1.path1;Name=comp151325_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1241;mismatches=3;indels=0;unknowns=0;Target=comp151325_c0_seq1 1244 1 .;CDS_Target=comp151325_c0_seq1 757 638 .;locus=RLOC_00004539
ChrX	stalkie_big_nohaplotig	exon	83733179	83734422	99	-	.	Parent=comp151325_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	83733666	83733785	.	-	0	Parent=comp151325_c0_seq1.mrna1
ChrX	gffcl	locus	83734586	83736178	.	+	.	ID=RLOC_00004540;geneIDs=comp147257_c0_seq1.path1;transcripts=comp147257_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83734586	83736178	.	+	.	ID=comp147257_c0_seq1.mrna1;geneID=comp147257_c0_seq1.path1;Name=comp147257_c0_seq1;Dir=indeterminatecoverage=95.8;identity=100.0;matches=1593;mismatches=0;indels=0;unknowns=0;Target=comp147257_c0_seq1 1593 1 .;CDS_Target=comp147257_c0_seq1 1586 1422 .;locus=RLOC_00004540
ChrX	stalkie_big_nohaplotig	exon	83734586	83736178	100	+	.	Parent=comp147257_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	83736007	83736171	.	+	0	Parent=comp147257_c0_seq1.mrna1
ChrX	gffcl	locus	83823778	83918978	.	+	.	ID=RLOC_00004541;geneIDs=FBgn0031725.1.path1;transcripts=FBgn0031725.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83823778	83918978	.	+	.	ID=FBgn0031725.1.mrna1;geneID=FBgn0031725.1.path1;Name=FBgn0031725.1;Dir=sensecoverage=100.0;identity=100.0;matches=1386;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004541
ChrX	stalkie_big_nohaplotig	exon	83823778	83823955	100	+	.	Parent=FBgn0031725.1.mrna1;Target=FBgn0031725.1 1 178 +
ChrX	stalkie_big_nohaplotig	exon	83837351	83837448	100	+	.	Parent=FBgn0031725.1.mrna1;Target=FBgn0031725.1 179 276 +
ChrX	stalkie_big_nohaplotig	exon	83850231	83850438	100	+	.	Parent=FBgn0031725.1.mrna1;Target=FBgn0031725.1 277 484 +
ChrX	stalkie_big_nohaplotig	exon	83880981	83881139	100	+	.	Parent=FBgn0031725.1.mrna1;Target=FBgn0031725.1 485 643 +
ChrX	stalkie_big_nohaplotig	exon	83897001	83897129	100	+	.	Parent=FBgn0031725.1.mrna1;Target=FBgn0031725.1 644 772 +
ChrX	stalkie_big_nohaplotig	exon	83897720	83897857	100	+	.	Parent=FBgn0031725.1.mrna1;Target=FBgn0031725.1 773 910 +
ChrX	stalkie_big_nohaplotig	exon	83911258	83911410	100	+	.	Parent=FBgn0031725.1.mrna1;Target=FBgn0031725.1 911 1063 +
ChrX	stalkie_big_nohaplotig	exon	83911748	83911801	100	+	.	Parent=FBgn0031725.1.mrna1;Target=FBgn0031725.1 1064 1117 +
ChrX	stalkie_big_nohaplotig	exon	83917089	83917178	100	+	.	Parent=FBgn0031725.1.mrna1;Target=FBgn0031725.1 1118 1207 +
ChrX	stalkie_big_nohaplotig	exon	83918800	83918978	100	+	.	Parent=FBgn0031725.1.mrna1;Target=FBgn0031725.1 1208 1386 +
ChrX	stalkie_big_nohaplotig	CDS	83823778	83823955	.	+	0	Parent=FBgn0031725.1.mrna1;Target=FBgn0031725.1 1 178 +
ChrX	stalkie_big_nohaplotig	CDS	83837351	83837448	.	+	2	Parent=FBgn0031725.1.mrna1;Target=FBgn0031725.1 179 276 +
ChrX	stalkie_big_nohaplotig	CDS	83850231	83850438	.	+	0	Parent=FBgn0031725.1.mrna1;Target=FBgn0031725.1 277 484 +
ChrX	stalkie_big_nohaplotig	CDS	83880981	83881139	.	+	2	Parent=FBgn0031725.1.mrna1;Target=FBgn0031725.1 485 643 +
ChrX	stalkie_big_nohaplotig	CDS	83897001	83897129	.	+	2	Parent=FBgn0031725.1.mrna1;Target=FBgn0031725.1 644 772 +
ChrX	stalkie_big_nohaplotig	CDS	83897720	83897857	.	+	2	Parent=FBgn0031725.1.mrna1;Target=FBgn0031725.1 773 910 +
ChrX	stalkie_big_nohaplotig	CDS	83911258	83911410	.	+	2	Parent=FBgn0031725.1.mrna1;Target=FBgn0031725.1 911 1063 +
ChrX	stalkie_big_nohaplotig	CDS	83911748	83911801	.	+	2	Parent=FBgn0031725.1.mrna1;Target=FBgn0031725.1 1064 1117 +
ChrX	stalkie_big_nohaplotig	CDS	83917089	83917178	.	+	2	Parent=FBgn0031725.1.mrna1;Target=FBgn0031725.1 1118 1207 +
ChrX	stalkie_big_nohaplotig	CDS	83918800	83918978	.	+	2	Parent=FBgn0031725.1.mrna1;Target=FBgn0031725.1 1208 1386 +
ChrX	gffcl	locus	83874049	83874893	.	-	.	ID=RLOC_00004542;geneIDs=Dp_FBgn0243606.path4,comp163367_c4_seq1.path4;transcripts=comp163367_c4_seq1.mrna4
ChrX	stalkie_big_nohaplotig	mRNA	83874049	83874893	.	-	.	ID=comp163367_c4_seq1.mrna4;geneID=comp163367_c4_seq1.path4;Name=comp163367_c4_seq1;Dir=indeterminatecoverage=99.6;identity=98.0;matches=828;mismatches=17;indels=0;unknowns=0;Target=comp163367_c4_seq1 845 1 .;CDS_Target=comp163367_c4_seq1 844 2 .;locus=RLOC_00004542
ChrX	stalkie_big_nohaplotig	exon	83874049	83874893	97	-	.	Parent=comp163367_c4_seq1.mrna4
ChrX	stalkie_big_nohaplotig	CDS	83874050	83874892	.	-	0	Parent=comp163367_c4_seq1.mrna4
ChrX	gffcl	locus	83919425	85883395	.	+	.	ID=RLOC_00004543;geneIDs=comp117251_c0_seq1.path1;transcripts=comp117251_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83919425	85883395	.	+	.	ID=comp117251_c0_seq1.mrna1;geneID=comp117251_c0_seq1.path1;Name=comp117251_c0_seq1;Dir=indeterminatecoverage=91.8;identity=93.1;matches=406;mismatches=25;indels=5;unknowns=0;locus=RLOC_00004543
ChrX	stalkie_big_nohaplotig	exon	83919425	83919675	100	+	.	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 253 3 .
ChrX	stalkie_big_nohaplotig	exon	85759215	85759271	64	+	.	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 305 254 .
ChrX	stalkie_big_nohaplotig	exon	85759537	85759546	100	+	.	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 315 306 .
ChrX	stalkie_big_nohaplotig	exon	85775083	85775085	100	+	.	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 318 316 .
ChrX	stalkie_big_nohaplotig	exon	85785571	85785576	100	+	.	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 324 319 .
ChrX	stalkie_big_nohaplotig	exon	85787179	85787189	90	+	.	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 335 325 .
ChrX	stalkie_big_nohaplotig	exon	85791353	85791361	77	+	.	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 344 336 .
ChrX	stalkie_big_nohaplotig	exon	85802951	85802954	100	+	.	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 348 345 .
ChrX	stalkie_big_nohaplotig	exon	85816872	85816875	75	+	.	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 352 349 .
ChrX	stalkie_big_nohaplotig	exon	85821378	85821386	88	+	.	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 361 353 .
ChrX	stalkie_big_nohaplotig	exon	85828007	85828018	83	+	.	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 373 362 .
ChrX	stalkie_big_nohaplotig	exon	85849458	85849461	100	+	.	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 377 374 .
ChrX	stalkie_big_nohaplotig	exon	85854709	85854715	100	+	.	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 384 378 .
ChrX	stalkie_big_nohaplotig	exon	85863541	85863550	80	+	.	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 441 432 .
ChrX	stalkie_big_nohaplotig	exon	85865643	85865652	90	+	.	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 451 442 .
ChrX	stalkie_big_nohaplotig	exon	85873013	85873015	100	+	.	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 454 452 .
ChrX	stalkie_big_nohaplotig	exon	85874335	85874346	100	+	.	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 466 455 .
ChrX	stalkie_big_nohaplotig	exon	85878336	85878340	100	+	.	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 471 467 .
ChrX	stalkie_big_nohaplotig	exon	85883388	85883395	100	+	.	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 493 486 .
ChrX	stalkie_big_nohaplotig	CDS	83919610	83919675	.	+	0	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 253 188 .
ChrX	stalkie_big_nohaplotig	CDS	85759215	85759271	.	+	0	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 305 254 .
ChrX	stalkie_big_nohaplotig	CDS	85759537	85759546	.	+	0	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 315 306 .
ChrX	stalkie_big_nohaplotig	CDS	85775083	85775085	.	+	2	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 318 316 .
ChrX	stalkie_big_nohaplotig	CDS	85785571	85785576	.	+	2	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 324 319 .
ChrX	stalkie_big_nohaplotig	CDS	85787179	85787189	.	+	2	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 335 325 .
ChrX	stalkie_big_nohaplotig	CDS	85791353	85791361	.	+	0	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 344 336 .
ChrX	stalkie_big_nohaplotig	CDS	85802951	85802952	.	+	0	Parent=comp117251_c0_seq1.mrna1;Target=comp117251_c0_seq1 346 345 .
ChrX	gffcl	locus	83924321	83925039	.	-	.	ID=RLOC_00004544;geneIDs=comp146442_c0_seq1.path2;transcripts=comp146442_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	83924321	83925039	.	-	.	ID=comp146442_c0_seq1.mrna2;geneID=comp146442_c0_seq1.path2;Name=comp146442_c0_seq1;Dir=indeterminatecoverage=90.0;identity=99.0;matches=712;mismatches=7;indels=0;unknowns=0;Target=comp146442_c0_seq1 787 69 .;CDS_Target=comp146442_c0_seq1 141 70 .;locus=RLOC_00004544
ChrX	stalkie_big_nohaplotig	exon	83924321	83925039	99	-	.	Parent=comp146442_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	83924967	83925038	.	-	0	Parent=comp146442_c0_seq1.mrna2
ChrX	gffcl	locus	83927543	83928261	.	-	.	ID=RLOC_00004545;geneIDs=comp146442_c0_seq1.path1;transcripts=comp146442_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83927543	83928261	.	-	.	ID=comp146442_c0_seq1.mrna1;geneID=comp146442_c0_seq1.path1;Name=comp146442_c0_seq1;Dir=indeterminatecoverage=90.0;identity=99.2;matches=713;mismatches=6;indels=0;unknowns=0;Target=comp146442_c0_seq1 787 69 .;CDS_Target=comp146442_c0_seq1 141 70 .;locus=RLOC_00004545
ChrX	stalkie_big_nohaplotig	exon	83927543	83928261	99	-	.	Parent=comp146442_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	83928189	83928260	.	-	0	Parent=comp146442_c0_seq1.mrna1
ChrX	gffcl	locus	83963555	83964469	.	-	.	ID=RLOC_00004546;geneIDs=comp150228_c0_seq1.path1;transcripts=comp150228_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	83963555	83964469	.	-	.	ID=comp150228_c0_seq1.mrna1;geneID=comp150228_c0_seq1.path1;Name=comp150228_c0_seq1;Dir=antisensecoverage=99.8;identity=96.6;matches=836;mismatches=22;indels=7;unknowns=0;locus=RLOC_00004546
ChrX	stalkie_big_nohaplotig	exon	83963555	83963914	95	-	.	Parent=comp150228_c0_seq1.mrna1;Target=comp150228_c0_seq1 2 361 -
ChrX	stalkie_big_nohaplotig	exon	83963966	83964469	97	-	.	Parent=comp150228_c0_seq1.mrna1;Target=comp150228_c0_seq1 362 860 -
ChrX	stalkie_big_nohaplotig	CDS	83963765	83963914	.	-	0	Parent=comp150228_c0_seq1.mrna1;Target=comp150228_c0_seq1 212 361 .
ChrX	stalkie_big_nohaplotig	CDS	83963966	83964337	.	-	0	Parent=comp150228_c0_seq1.mrna1;Target=comp150228_c0_seq1 362 733 .
ChrX	gffcl	locus	84042347	84042490	.	-	.	ID=RLOC_00004547;geneIDs=comp1653752_c0_seq1.path3;transcripts=comp1653752_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	84042347	84042490	.	-	.	ID=comp1653752_c0_seq1.mrna3;geneID=comp1653752_c0_seq1.path3;Name=comp1653752_c0_seq1;Dir=indeterminatecoverage=68.9;identity=80.6;matches=116;mismatches=28;indels=0;unknowns=0;Target=comp1653752_c0_seq1 209 66 .;CDS_Target=comp1653752_c0_seq1 156 67 .;locus=RLOC_00004547
ChrX	stalkie_big_nohaplotig	exon	84042347	84042490	80	-	.	Parent=comp1653752_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	CDS	84042400	84042489	.	-	0	Parent=comp1653752_c0_seq1.mrna3
ChrX	gffcl	locus	84049607	84050126	.	-	.	ID=RLOC_00004548;geneIDs=comp158135_c1_seq1.path2;transcripts=comp158135_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	84049607	84050126	.	-	.	ID=comp158135_c1_seq1.mrna2;geneID=comp158135_c1_seq1.path2;Name=comp158135_c1_seq1;Dir=indeterminatecoverage=90.4;identity=96.9;matches=504;mismatches=15;indels=1;unknowns=0;Target=comp158135_c1_seq1 574 56 .;CDS_Target=comp158135_c1_seq1 300 151 .;locus=RLOC_00004548
ChrX	stalkie_big_nohaplotig	exon	84049607	84050126	96	-	.	Parent=comp158135_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	84049881	84050030	.	-	0	Parent=comp158135_c1_seq1.mrna2
ChrX	gffcl	locus	84052291	84053132	.	+	.	ID=RLOC_00004549;geneIDs=comp143855_c1_seq1.path1;transcripts=comp143855_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84052291	84053132	.	+	.	ID=comp143855_c1_seq1.mrna1;geneID=comp143855_c1_seq1.path1;Name=comp143855_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=842;mismatches=0;indels=0;unknowns=0;Target=comp143855_c1_seq1 842 1 .;CDS_Target=comp143855_c1_seq1 789 607 .;locus=RLOC_00004549
ChrX	stalkie_big_nohaplotig	exon	84052291	84053132	100	+	.	Parent=comp143855_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	84052897	84053079	.	+	0	Parent=comp143855_c1_seq1.mrna1
ChrX	gffcl	locus	84054790	84055816	.	-	.	ID=RLOC_00004550;geneIDs=comp153936_c2_seq1.path1;transcripts=comp153936_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84054790	84055816	.	-	.	ID=comp153936_c2_seq1.mrna1;geneID=comp153936_c2_seq1.path1;Name=comp153936_c2_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=817;mismatches=5;indels=0;unknowns=0;locus=RLOC_00004550
ChrX	stalkie_big_nohaplotig	exon	84054790	84055116	100	-	.	Parent=comp153936_c2_seq1.mrna1;Target=comp153936_c2_seq1 496 822 +
ChrX	stalkie_big_nohaplotig	exon	84055195	84055504	98	-	.	Parent=comp153936_c2_seq1.mrna1;Target=comp153936_c2_seq1 186 495 +
ChrX	stalkie_big_nohaplotig	exon	84055570	84055711	100	-	.	Parent=comp153936_c2_seq1.mrna1;Target=comp153936_c2_seq1 44 185 +
ChrX	stalkie_big_nohaplotig	exon	84055774	84055816	100	-	.	Parent=comp153936_c2_seq1.mrna1;Target=comp153936_c2_seq1 1 43 +
ChrX	stalkie_big_nohaplotig	CDS	84055111	84055116	.	-	0	Parent=comp153936_c2_seq1.mrna1;Target=comp153936_c2_seq1 496 501 +
ChrX	stalkie_big_nohaplotig	CDS	84055195	84055317	.	-	0	Parent=comp153936_c2_seq1.mrna1;Target=comp153936_c2_seq1 373 495 +
ChrX	gffcl	locus	84093849	84095233	.	+	.	ID=RLOC_00004551;geneIDs=comp151834_c0_seq1.path1;transcripts=comp151834_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84093849	84095233	.	+	.	ID=comp151834_c0_seq1.mrna1;geneID=comp151834_c0_seq1.path1;Name=comp151834_c0_seq1;Dir=sensecoverage=99.2;identity=100.0;matches=1116;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004551
ChrX	stalkie_big_nohaplotig	exon	84093849	84093976	100	+	.	Parent=comp151834_c0_seq1.mrna1;Target=comp151834_c0_seq1 10 137 +
ChrX	stalkie_big_nohaplotig	exon	84094033	84094173	100	+	.	Parent=comp151834_c0_seq1.mrna1;Target=comp151834_c0_seq1 138 278 +
ChrX	stalkie_big_nohaplotig	exon	84094387	84095233	100	+	.	Parent=comp151834_c0_seq1.mrna1;Target=comp151834_c0_seq1 279 1125 +
ChrX	stalkie_big_nohaplotig	CDS	84094155	84094173	.	+	0	Parent=comp151834_c0_seq1.mrna1;Target=comp151834_c0_seq1 260 278 +
ChrX	stalkie_big_nohaplotig	CDS	84094387	84094634	.	+	2	Parent=comp151834_c0_seq1.mrna1;Target=comp151834_c0_seq1 279 526 +
ChrX	gffcl	locus	84150689	85994356	.	+	.	ID=RLOC_00004552;geneIDs=comp61260_c0_seq1.path1;transcripts=comp61260_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84150689	85994356	.	+	.	ID=comp61260_c0_seq1.mrna1;geneID=comp61260_c0_seq1.path1;Name=comp61260_c0_seq1;Dir=indeterminatecoverage=78.3;identity=100.0;matches=656;mismatches=0;indels=0;unknowns=0;Target=comp61260_c0_seq1 381 196 .;locus=RLOC_00004552
ChrX	stalkie_big_nohaplotig	exon	84150689	84151217	100	+	.	Parent=comp61260_c0_seq1.mrna1;Target=comp61260_c0_seq1 552 24 .
ChrX	stalkie_big_nohaplotig	exon	85851415	85851418	100	+	.	Parent=comp61260_c0_seq1.mrna1;Target=comp61260_c0_seq1 556 553 .
ChrX	stalkie_big_nohaplotig	exon	85875386	85875395	100	+	.	Parent=comp61260_c0_seq1.mrna1;Target=comp61260_c0_seq1 566 557 .
ChrX	stalkie_big_nohaplotig	exon	85876213	85876225	100	+	.	Parent=comp61260_c0_seq1.mrna1;Target=comp61260_c0_seq1 579 567 .
ChrX	stalkie_big_nohaplotig	exon	85884396	85884399	100	+	.	Parent=comp61260_c0_seq1.mrna1;Target=comp61260_c0_seq1 585 582 .
ChrX	stalkie_big_nohaplotig	exon	85890579	85890584	100	+	.	Parent=comp61260_c0_seq1.mrna1;Target=comp61260_c0_seq1 591 586 .
ChrX	stalkie_big_nohaplotig	exon	85893381	85893387	100	+	.	Parent=comp61260_c0_seq1.mrna1;Target=comp61260_c0_seq1 598 592 .
ChrX	stalkie_big_nohaplotig	exon	85897560	85897566	100	+	.	Parent=comp61260_c0_seq1.mrna1;Target=comp61260_c0_seq1 605 599 .
ChrX	stalkie_big_nohaplotig	exon	85905311	85905314	100	+	.	Parent=comp61260_c0_seq1.mrna1;Target=comp61260_c0_seq1 609 606 .
ChrX	stalkie_big_nohaplotig	exon	85912516	85912524	100	+	.	Parent=comp61260_c0_seq1.mrna1;Target=comp61260_c0_seq1 618 610 .
ChrX	stalkie_big_nohaplotig	exon	85912538	85912540	100	+	.	Parent=comp61260_c0_seq1.mrna1;Target=comp61260_c0_seq1 625 623 .
ChrX	stalkie_big_nohaplotig	exon	85919680	85919683	100	+	.	Parent=comp61260_c0_seq1.mrna1;Target=comp61260_c0_seq1 629 626 .
ChrX	stalkie_big_nohaplotig	exon	85920042	85920045	100	+	.	Parent=comp61260_c0_seq1.mrna1;Target=comp61260_c0_seq1 633 630 .
ChrX	stalkie_big_nohaplotig	exon	85924672	85924674	100	+	.	Parent=comp61260_c0_seq1.mrna1;Target=comp61260_c0_seq1 636 634 .
ChrX	stalkie_big_nohaplotig	exon	85927638	85927644	100	+	.	Parent=comp61260_c0_seq1.mrna1;Target=comp61260_c0_seq1 643 637 .
ChrX	stalkie_big_nohaplotig	exon	85932173	85932177	100	+	.	Parent=comp61260_c0_seq1.mrna1;Target=comp61260_c0_seq1 648 644 .
ChrX	stalkie_big_nohaplotig	exon	85939513	85939518	100	+	.	Parent=comp61260_c0_seq1.mrna1;Target=comp61260_c0_seq1 654 649 .
ChrX	stalkie_big_nohaplotig	exon	85970033	85970039	100	+	.	Parent=comp61260_c0_seq1.mrna1;Target=comp61260_c0_seq1 661 655 .
ChrX	stalkie_big_nohaplotig	exon	85971814	85971825	100	+	.	Parent=comp61260_c0_seq1.mrna1;Target=comp61260_c0_seq1 673 662 .
ChrX	stalkie_big_nohaplotig	exon	85971849	85971851	100	+	.	Parent=comp61260_c0_seq1.mrna1;Target=comp61260_c0_seq1 721 719 .
ChrX	stalkie_big_nohaplotig	exon	85978660	85978662	100	+	.	Parent=comp61260_c0_seq1.mrna1;Target=comp61260_c0_seq1 724 722 .
ChrX	stalkie_big_nohaplotig	exon	85994351	85994356	100	+	.	Parent=comp61260_c0_seq1.mrna1;Target=comp61260_c0_seq1 730 725 .
ChrX	stalkie_big_nohaplotig	CDS	84150861	84151046	.	+	0	Parent=comp61260_c0_seq1.mrna1
ChrX	gffcl	locus	84168798	84169545	.	-	.	ID=RLOC_00004553;geneIDs=FBgn0034654.3.path2;transcripts=FBgn0034654.3.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	84168798	84169545	.	-	.	ID=FBgn0034654.3.mrna2;geneID=FBgn0034654.3.path2;Name=FBgn0034654.3;Dir=sensecoverage=100.0;identity=99.5;matches=630;mismatches=3;indels=0;unknowns=0;locus=RLOC_00004553
ChrX	stalkie_big_nohaplotig	exon	84168798	84168922	99	-	.	Parent=FBgn0034654.3.mrna2;Target=FBgn0034654.3 509 633 +
ChrX	stalkie_big_nohaplotig	exon	84168980	84169416	99	-	.	Parent=FBgn0034654.3.mrna2;Target=FBgn0034654.3 72 508 +
ChrX	stalkie_big_nohaplotig	exon	84169475	84169545	100	-	.	Parent=FBgn0034654.3.mrna2;Target=FBgn0034654.3 1 71 +
ChrX	stalkie_big_nohaplotig	CDS	84168798	84168922	.	-	2	Parent=FBgn0034654.3.mrna2;Target=FBgn0034654.3 509 633 +
ChrX	stalkie_big_nohaplotig	CDS	84168980	84169416	.	-	1	Parent=FBgn0034654.3.mrna2;Target=FBgn0034654.3 72 508 +
ChrX	stalkie_big_nohaplotig	CDS	84169475	84169545	.	-	0	Parent=FBgn0034654.3.mrna2;Target=FBgn0034654.3 1 71 +
ChrX	gffcl	locus	84176985	84178010	.	-	.	ID=RLOC_00004554;geneIDs=FBgn0260743.2.path1;transcripts=FBgn0260743.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84176985	84178010	.	-	.	ID=FBgn0260743.2.mrna1;geneID=FBgn0260743.2.path1;Name=FBgn0260743.2;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1025;mismatches=1;indels=0;unknowns=0;Target=FBgn0260743.2 1026 1 .;locus=RLOC_00004554
ChrX	stalkie_big_nohaplotig	exon	84176985	84178010	99	-	.	Parent=FBgn0260743.2.mrna1
ChrX	stalkie_big_nohaplotig	CDS	84176985	84178010	.	-	0	Parent=FBgn0260743.2.mrna1
ChrX	gffcl	locus	84251791	84254387	.	-	.	ID=RLOC_00004555;geneIDs=comp148807_c0_seq1.path1;transcripts=comp148807_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84251791	84254387	.	-	.	ID=comp148807_c0_seq1.mrna1;geneID=comp148807_c0_seq1.path1;Name=comp148807_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=923;mismatches=5;indels=0;unknowns=0;Target=comp148807_c0_seq1 274 702 +;locus=RLOC_00004555
ChrX	stalkie_big_nohaplotig	exon	84251791	84252452	99	-	.	Parent=comp148807_c0_seq1.mrna1;Target=comp148807_c0_seq1 267 928 +
ChrX	stalkie_big_nohaplotig	exon	84254122	84254387	100	-	.	Parent=comp148807_c0_seq1.mrna1;Target=comp148807_c0_seq1 1 266 +
ChrX	stalkie_big_nohaplotig	CDS	84252017	84252445	.	-	0	Parent=comp148807_c0_seq1.mrna1
ChrX	gffcl	locus	84316426	84324890	.	-	.	ID=RLOC_00004556;geneIDs=FBgn0004620.1.path1;transcripts=FBgn0004620.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84316426	84324890	.	-	.	ID=FBgn0004620.1.mrna1;geneID=FBgn0004620.1.path1;Name=FBgn0004620.1;Dir=sensecoverage=100.0;identity=100.0;matches=2838;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004556
ChrX	stalkie_big_nohaplotig	exon	84316426	84316662	100	-	.	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 2602 2838 +
ChrX	stalkie_big_nohaplotig	exon	84316726	84316982	100	-	.	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 2345 2601 +
ChrX	stalkie_big_nohaplotig	exon	84317048	84317478	100	-	.	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 1914 2344 +
ChrX	stalkie_big_nohaplotig	exon	84317531	84317668	100	-	.	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 1776 1913 +
ChrX	stalkie_big_nohaplotig	exon	84317738	84317961	100	-	.	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 1552 1775 +
ChrX	stalkie_big_nohaplotig	exon	84321960	84322137	100	-	.	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 1374 1551 +
ChrX	stalkie_big_nohaplotig	exon	84322206	84322465	100	-	.	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 1114 1373 +
ChrX	stalkie_big_nohaplotig	exon	84322521	84322703	100	-	.	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 931 1113 +
ChrX	stalkie_big_nohaplotig	exon	84322758	84322907	100	-	.	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 781 930 +
ChrX	stalkie_big_nohaplotig	exon	84322969	84323186	100	-	.	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 563 780 +
ChrX	stalkie_big_nohaplotig	exon	84323978	84324184	100	-	.	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 356 562 +
ChrX	stalkie_big_nohaplotig	exon	84324376	84324438	100	-	.	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 293 355 +
ChrX	stalkie_big_nohaplotig	exon	84324513	84324662	100	-	.	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 143 292 +
ChrX	stalkie_big_nohaplotig	exon	84324749	84324890	100	-	.	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 1 142 +
ChrX	stalkie_big_nohaplotig	CDS	84316426	84316662	.	-	0	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 2602 2838 +
ChrX	stalkie_big_nohaplotig	CDS	84316726	84316982	.	-	2	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 2345 2601 +
ChrX	stalkie_big_nohaplotig	CDS	84317048	84317478	.	-	1	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 1914 2344 +
ChrX	stalkie_big_nohaplotig	CDS	84317531	84317668	.	-	1	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 1776 1913 +
ChrX	stalkie_big_nohaplotig	CDS	84317738	84317961	.	-	0	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 1552 1775 +
ChrX	stalkie_big_nohaplotig	CDS	84321960	84322137	.	-	1	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 1374 1551 +
ChrX	stalkie_big_nohaplotig	CDS	84322206	84322465	.	-	0	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 1114 1373 +
ChrX	stalkie_big_nohaplotig	CDS	84322521	84322703	.	-	0	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 931 1113 +
ChrX	stalkie_big_nohaplotig	CDS	84322758	84322907	.	-	0	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 781 930 +
ChrX	stalkie_big_nohaplotig	CDS	84322969	84323186	.	-	2	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 563 780 +
ChrX	stalkie_big_nohaplotig	CDS	84323978	84324184	.	-	2	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 356 562 +
ChrX	stalkie_big_nohaplotig	CDS	84324376	84324438	.	-	2	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 293 355 +
ChrX	stalkie_big_nohaplotig	CDS	84324513	84324662	.	-	2	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 143 292 +
ChrX	stalkie_big_nohaplotig	CDS	84324749	84324890	.	-	0	Parent=FBgn0004620.1.mrna1;Target=FBgn0004620.1 1 142 +
ChrX	gffcl	locus	84334911	85858943	.	+	.	ID=RLOC_00004557;geneIDs=FBgn0031399.1.path1,comp159724_c1_seq1.path1;transcripts=comp159724_c1_seq1.mrna1,FBgn0031399.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84334911	85858943	.	+	.	ID=comp159724_c1_seq1.mrna1;geneID=comp159724_c1_seq1.path1;Name=comp159724_c1_seq1;Dir=sensecoverage=94.9;identity=99.9;matches=3358;mismatches=3;indels=0;unknowns=0;locus=RLOC_00004557
ChrX	stalkie_big_nohaplotig	exon	84334911	84335289	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 3 381 +
ChrX	stalkie_big_nohaplotig	exon	84335349	84335522	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 382 555 +
ChrX	stalkie_big_nohaplotig	exon	84335581	84335721	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 556 696 +
ChrX	stalkie_big_nohaplotig	exon	84335785	84335895	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 697 807 +
ChrX	stalkie_big_nohaplotig	exon	84335954	84336143	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 808 997 +
ChrX	stalkie_big_nohaplotig	exon	84336216	84336433	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 998 1215 +
ChrX	stalkie_big_nohaplotig	exon	84336485	84336950	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 1216 1681 +
ChrX	stalkie_big_nohaplotig	exon	84337050	84337140	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 1682 1772 +
ChrX	stalkie_big_nohaplotig	exon	84337202	84337465	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 1773 2036 +
ChrX	stalkie_big_nohaplotig	exon	84337529	84338061	99	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 2037 2569 +
ChrX	stalkie_big_nohaplotig	exon	84338125	84338330	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 2570 2775 +
ChrX	stalkie_big_nohaplotig	exon	84339081	84339585	99	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 2776 3280 +
ChrX	stalkie_big_nohaplotig	exon	85774594	85774596	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 3307 3309 +
ChrX	stalkie_big_nohaplotig	exon	85783122	85783128	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 3310 3316 +
ChrX	stalkie_big_nohaplotig	exon	85784943	85784949	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 3317 3323 +
ChrX	stalkie_big_nohaplotig	exon	85791707	85791712	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 3324 3329 +
ChrX	stalkie_big_nohaplotig	exon	85796239	85796243	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 3330 3334 +
ChrX	stalkie_big_nohaplotig	exon	85803016	85803021	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 3335 3340 +
ChrX	stalkie_big_nohaplotig	exon	85810118	85810120	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 3341 3343 +
ChrX	stalkie_big_nohaplotig	exon	85816320	85816322	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 3344 3346 +
ChrX	stalkie_big_nohaplotig	exon	85822878	85822883	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 3347 3352 +
ChrX	stalkie_big_nohaplotig	exon	85829727	85829729	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 3353 3355 +
ChrX	stalkie_big_nohaplotig	exon	85832771	85832777	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 3356 3362 +
ChrX	stalkie_big_nohaplotig	exon	85834614	85834617	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 3363 3366 +
ChrX	stalkie_big_nohaplotig	exon	85840543	85840545	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 3367 3369 +
ChrX	stalkie_big_nohaplotig	exon	85842717	85842723	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 3370 3376 +
ChrX	stalkie_big_nohaplotig	exon	85848877	85848878	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 3377 3378 +
ChrX	stalkie_big_nohaplotig	exon	85858934	85858943	100	+	.	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 3379 3388 +
ChrX	stalkie_big_nohaplotig	CDS	84335172	84335289	.	+	0	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 264 381 +
ChrX	stalkie_big_nohaplotig	CDS	84335349	84335522	.	+	2	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 382 555 +
ChrX	stalkie_big_nohaplotig	CDS	84335581	84335721	.	+	2	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 556 696 +
ChrX	stalkie_big_nohaplotig	CDS	84335785	84335895	.	+	2	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 697 807 +
ChrX	stalkie_big_nohaplotig	CDS	84335954	84336143	.	+	2	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 808 997 +
ChrX	stalkie_big_nohaplotig	CDS	84336216	84336433	.	+	1	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 998 1215 +
ChrX	stalkie_big_nohaplotig	CDS	84336485	84336950	.	+	2	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 1216 1681 +
ChrX	stalkie_big_nohaplotig	CDS	84337050	84337140	.	+	1	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 1682 1772 +
ChrX	stalkie_big_nohaplotig	CDS	84337202	84337465	.	+	0	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 1773 2036 +
ChrX	stalkie_big_nohaplotig	CDS	84337529	84337876	.	+	0	Parent=comp159724_c1_seq1.mrna1;Target=comp159724_c1_seq1 2037 2384 +
ChrX	stalkie_big_nohaplotig	mRNA	84335160	84339168	.	+	.	ID=FBgn0031399.1.mrna1;geneID=FBgn0031399.1.path1;Name=FBgn0031399.1;Dir=sensecoverage=100.0;identity=100.0;matches=2550;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004557
ChrX	stalkie_big_nohaplotig	exon	84335160	84335289	100	+	.	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 1 130 +
ChrX	stalkie_big_nohaplotig	exon	84335349	84335522	100	+	.	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 131 304 +
ChrX	stalkie_big_nohaplotig	exon	84335581	84335721	100	+	.	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 305 445 +
ChrX	stalkie_big_nohaplotig	exon	84335785	84335895	100	+	.	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 446 556 +
ChrX	stalkie_big_nohaplotig	exon	84335954	84336143	100	+	.	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 557 746 +
ChrX	stalkie_big_nohaplotig	exon	84336216	84336433	100	+	.	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 747 964 +
ChrX	stalkie_big_nohaplotig	exon	84336485	84336950	100	+	.	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 965 1430 +
ChrX	stalkie_big_nohaplotig	exon	84337050	84337140	100	+	.	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 1431 1521 +
ChrX	stalkie_big_nohaplotig	exon	84337202	84337465	100	+	.	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 1522 1785 +
ChrX	stalkie_big_nohaplotig	exon	84337529	84337806	100	+	.	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 1786 2063 +
ChrX	stalkie_big_nohaplotig	exon	84337869	84338061	100	+	.	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 2064 2256 +
ChrX	stalkie_big_nohaplotig	exon	84338125	84338330	100	+	.	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 2257 2462 +
ChrX	stalkie_big_nohaplotig	exon	84339081	84339168	100	+	.	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 2463 2550 +
ChrX	stalkie_big_nohaplotig	CDS	84335160	84335289	.	+	0	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 1 130 +
ChrX	stalkie_big_nohaplotig	CDS	84335349	84335522	.	+	2	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 131 304 +
ChrX	stalkie_big_nohaplotig	CDS	84335581	84335721	.	+	2	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 305 445 +
ChrX	stalkie_big_nohaplotig	CDS	84335785	84335895	.	+	2	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 446 556 +
ChrX	stalkie_big_nohaplotig	CDS	84335954	84336143	.	+	2	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 557 746 +
ChrX	stalkie_big_nohaplotig	CDS	84336216	84336433	.	+	1	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 747 964 +
ChrX	stalkie_big_nohaplotig	CDS	84336485	84336950	.	+	2	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 965 1430 +
ChrX	stalkie_big_nohaplotig	CDS	84337050	84337140	.	+	1	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 1431 1521 +
ChrX	stalkie_big_nohaplotig	CDS	84337202	84337465	.	+	0	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 1522 1785 +
ChrX	stalkie_big_nohaplotig	CDS	84337529	84337806	.	+	0	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 1786 2063 +
ChrX	stalkie_big_nohaplotig	CDS	84337869	84338061	.	+	1	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 2064 2256 +
ChrX	stalkie_big_nohaplotig	CDS	84338125	84338330	.	+	0	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 2257 2462 +
ChrX	stalkie_big_nohaplotig	CDS	84339081	84339168	.	+	1	Parent=FBgn0031399.1.mrna1;Target=FBgn0031399.1 2463 2550 +
ChrX	gffcl	locus	84350240	84356734	.	.	.	ID=RLOC_00004559;geneIDs=FBgn0026255.1.path1,comp117710_c0_seq1.path1;transcripts=FBgn0026255.1.mrna1,comp117710_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84350240	84356734	.	-	.	ID=FBgn0026255.1.mrna1;geneID=FBgn0026255.1.path1;Name=FBgn0026255.1;Dir=sensecoverage=100.0;identity=100.0;matches=2922;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004559
ChrX	stalkie_big_nohaplotig	exon	84350240	84350605	100	-	.	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 2557 2922 +
ChrX	stalkie_big_nohaplotig	exon	84350658	84350926	100	-	.	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 2288 2556 +
ChrX	stalkie_big_nohaplotig	exon	84350985	84351216	100	-	.	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 2056 2287 +
ChrX	stalkie_big_nohaplotig	exon	84351307	84351505	100	-	.	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 1857 2055 +
ChrX	stalkie_big_nohaplotig	exon	84351785	84352143	100	-	.	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 1498 1856 +
ChrX	stalkie_big_nohaplotig	exon	84352206	84352395	100	-	.	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 1308 1497 +
ChrX	stalkie_big_nohaplotig	exon	84352454	84352695	100	-	.	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 1066 1307 +
ChrX	stalkie_big_nohaplotig	exon	84352786	84352938	100	-	.	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 913 1065 +
ChrX	stalkie_big_nohaplotig	exon	84352999	84353187	100	-	.	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 724 912 +
ChrX	stalkie_big_nohaplotig	exon	84353254	84353465	100	-	.	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 512 723 +
ChrX	stalkie_big_nohaplotig	exon	84354716	84354919	100	-	.	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 308 511 +
ChrX	stalkie_big_nohaplotig	exon	84356266	84356328	100	-	.	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 245 307 +
ChrX	stalkie_big_nohaplotig	exon	84356396	84356542	100	-	.	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 98 244 +
ChrX	stalkie_big_nohaplotig	exon	84356638	84356734	100	-	.	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 1 97 +
ChrX	stalkie_big_nohaplotig	CDS	84350240	84350605	.	-	0	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 2557 2922 +
ChrX	stalkie_big_nohaplotig	CDS	84350658	84350926	.	-	2	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 2288 2556 +
ChrX	stalkie_big_nohaplotig	CDS	84350985	84351216	.	-	0	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 2056 2287 +
ChrX	stalkie_big_nohaplotig	CDS	84351307	84351505	.	-	1	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 1857 2055 +
ChrX	stalkie_big_nohaplotig	CDS	84351785	84352143	.	-	0	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 1498 1856 +
ChrX	stalkie_big_nohaplotig	CDS	84352206	84352395	.	-	1	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 1308 1497 +
ChrX	stalkie_big_nohaplotig	CDS	84352454	84352695	.	-	0	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 1066 1307 +
ChrX	stalkie_big_nohaplotig	CDS	84352786	84352938	.	-	0	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 913 1065 +
ChrX	stalkie_big_nohaplotig	CDS	84352999	84353187	.	-	0	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 724 912 +
ChrX	stalkie_big_nohaplotig	CDS	84353254	84353465	.	-	2	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 512 723 +
ChrX	stalkie_big_nohaplotig	CDS	84354716	84354919	.	-	2	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 308 511 +
ChrX	stalkie_big_nohaplotig	CDS	84356266	84356328	.	-	2	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 245 307 +
ChrX	stalkie_big_nohaplotig	CDS	84356396	84356542	.	-	2	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 98 244 +
ChrX	stalkie_big_nohaplotig	CDS	84356638	84356734	.	-	0	Parent=FBgn0026255.1.mrna1;Target=FBgn0026255.1 1 97 +
ChrX	stalkie_big_nohaplotig	mRNA	84354147	84354739	.	+	.	ID=comp117710_c0_seq1.mrna1;geneID=comp117710_c0_seq1.path1;Name=comp117710_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=589;mismatches=4;indels=0;unknowns=0;Target=comp117710_c0_seq1 593 1 .;CDS_Target=comp117710_c0_seq1 69 1 .;locus=RLOC_00004559
ChrX	stalkie_big_nohaplotig	exon	84354147	84354739	99	+	.	Parent=comp117710_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	84354147	84354215	.	+	0	Parent=comp117710_c0_seq1.mrna1
ChrX	gffcl	locus	84357816	84358516	.	+	.	ID=RLOC_00004560;geneIDs=comp178030_c0_seq1.path1;transcripts=comp178030_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84357816	84358516	.	+	.	ID=comp178030_c0_seq1.mrna1;geneID=comp178030_c0_seq1.path1;Name=comp178030_c0_seq1;Dir=indeterminatecoverage=97.5;identity=100.0;matches=701;mismatches=0;indels=0;unknowns=0;Target=comp178030_c0_seq1 719 19 .;CDS_Target=comp178030_c0_seq1 511 404 .;locus=RLOC_00004560
ChrX	stalkie_big_nohaplotig	exon	84357816	84358516	100	+	.	Parent=comp178030_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	84358201	84358308	.	+	0	Parent=comp178030_c0_seq1.mrna1
ChrX	gffcl	locus	84359606	84362080	.	-	.	ID=RLOC_00004561;geneIDs=FBgn0032935.1.path1;transcripts=FBgn0032935.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84359606	84362080	.	-	.	ID=FBgn0032935.1.mrna1;geneID=FBgn0032935.1.path1;Name=FBgn0032935.1;Dir=sensecoverage=100.0;identity=99.9;matches=1343;mismatches=0;indels=1;unknowns=0;Target=FBgn0032935.1 3 107 +;locus=RLOC_00004561
ChrX	stalkie_big_nohaplotig	exon	84359606	84359706	100	-	.	Parent=FBgn0032935.1.mrna1;Target=FBgn0032935.1 1244 1344 +
ChrX	stalkie_big_nohaplotig	exon	84360703	84360915	100	-	.	Parent=FBgn0032935.1.mrna1;Target=FBgn0032935.1 1031 1243 +
ChrX	stalkie_big_nohaplotig	exon	84360983	84361441	100	-	.	Parent=FBgn0032935.1.mrna1;Target=FBgn0032935.1 572 1030 +
ChrX	stalkie_big_nohaplotig	exon	84361511	84362080	99	-	.	Parent=FBgn0032935.1.mrna1;Target=FBgn0032935.1 1 571 +
ChrX	stalkie_big_nohaplotig	CDS	84361975	84362078	.	-	0	Parent=FBgn0032935.1.mrna1
ChrX	gffcl	locus	84376541	84377020	.	+	.	ID=RLOC_00004562;geneIDs=comp93459_c0_seq1.path1;transcripts=comp93459_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84376541	84377020	.	+	.	ID=comp93459_c0_seq1.mrna1;geneID=comp93459_c0_seq1.path1;Name=comp93459_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=480;mismatches=0;indels=0;unknowns=0;Target=comp93459_c0_seq1 480 1 .;CDS_Target=comp93459_c0_seq1 339 259 .;locus=RLOC_00004562
ChrX	stalkie_big_nohaplotig	exon	84376541	84377020	100	+	.	Parent=comp93459_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	84376799	84376879	.	+	0	Parent=comp93459_c0_seq1.mrna1
ChrX	gffcl	locus	84411655	84424659	.	+	.	ID=RLOC_00004563;geneIDs=FBgn0031799.1.path1;transcripts=FBgn0031799.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84411655	84424659	.	+	.	ID=FBgn0031799.1.mrna1;geneID=FBgn0031799.1.path1;Name=FBgn0031799.1;Dir=sensecoverage=97.7;identity=100.0;matches=4079;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004563
ChrX	stalkie_big_nohaplotig	exon	84411655	84412886	100	+	.	Parent=FBgn0031799.1.mrna1;Target=FBgn0031799.1 98 1329 +
ChrX	stalkie_big_nohaplotig	exon	84412993	84413924	100	+	.	Parent=FBgn0031799.1.mrna1;Target=FBgn0031799.1 1330 2261 +
ChrX	stalkie_big_nohaplotig	exon	84413984	84415052	100	+	.	Parent=FBgn0031799.1.mrna1;Target=FBgn0031799.1 2262 3330 +
ChrX	stalkie_big_nohaplotig	exon	84415399	84415617	100	+	.	Parent=FBgn0031799.1.mrna1;Target=FBgn0031799.1 3331 3549 +
ChrX	stalkie_big_nohaplotig	exon	84415678	84415854	100	+	.	Parent=FBgn0031799.1.mrna1;Target=FBgn0031799.1 3550 3726 +
ChrX	stalkie_big_nohaplotig	exon	84423929	84424252	100	+	.	Parent=FBgn0031799.1.mrna1;Target=FBgn0031799.1 3727 4050 +
ChrX	stalkie_big_nohaplotig	exon	84424534	84424659	100	+	.	Parent=FBgn0031799.1.mrna1;Target=FBgn0031799.1 4051 4176 +
ChrX	stalkie_big_nohaplotig	CDS	84411657	84412886	.	+	0	Parent=FBgn0031799.1.mrna1;Target=FBgn0031799.1 100 1329 +
ChrX	stalkie_big_nohaplotig	CDS	84412993	84413924	.	+	0	Parent=FBgn0031799.1.mrna1;Target=FBgn0031799.1 1330 2261 +
ChrX	stalkie_big_nohaplotig	CDS	84413984	84415052	.	+	1	Parent=FBgn0031799.1.mrna1;Target=FBgn0031799.1 2262 3330 +
ChrX	stalkie_big_nohaplotig	CDS	84415399	84415617	.	+	0	Parent=FBgn0031799.1.mrna1;Target=FBgn0031799.1 3331 3549 +
ChrX	stalkie_big_nohaplotig	CDS	84415678	84415854	.	+	0	Parent=FBgn0031799.1.mrna1;Target=FBgn0031799.1 3550 3726 +
ChrX	stalkie_big_nohaplotig	CDS	84423929	84424252	.	+	0	Parent=FBgn0031799.1.mrna1;Target=FBgn0031799.1 3727 4050 +
ChrX	stalkie_big_nohaplotig	CDS	84424534	84424659	.	+	0	Parent=FBgn0031799.1.mrna1;Target=FBgn0031799.1 4051 4176 +
ChrX	gffcl	locus	84437041	85714714	.	+	.	ID=RLOC_00004565;geneIDs=comp137309_c0_seq1.path1;transcripts=comp137309_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84437041	85714714	.	+	.	ID=comp137309_c0_seq1.mrna1;geneID=comp137309_c0_seq1.path1;Name=comp137309_c0_seq1;Dir=indeterminatecoverage=59.9;identity=97.5;matches=621;mismatches=2;indels=14;unknowns=0;Target=comp137309_c0_seq1 150 1 .;locus=RLOC_00004565
ChrX	stalkie_big_nohaplotig	exon	84437041	84437619	99	+	.	Parent=comp137309_c0_seq1.mrna1;Target=comp137309_c0_seq1 580 1 .
ChrX	stalkie_big_nohaplotig	exon	85686445	85686449	100	+	.	Parent=comp137309_c0_seq1.mrna1;Target=comp137309_c0_seq1 585 581 .
ChrX	stalkie_big_nohaplotig	exon	85694227	85694230	100	+	.	Parent=comp137309_c0_seq1.mrna1;Target=comp137309_c0_seq1 589 586 .
ChrX	stalkie_big_nohaplotig	exon	85701455	85701460	100	+	.	Parent=comp137309_c0_seq1.mrna1;Target=comp137309_c0_seq1 595 590 .
ChrX	stalkie_big_nohaplotig	exon	85708658	85708665	87	+	.	Parent=comp137309_c0_seq1.mrna1;Target=comp137309_c0_seq1 603 596 .
ChrX	stalkie_big_nohaplotig	exon	85710613	85710614	100	+	.	Parent=comp137309_c0_seq1.mrna1;Target=comp137309_c0_seq1 605 604 .
ChrX	stalkie_big_nohaplotig	exon	85712722	85712724	100	+	.	Parent=comp137309_c0_seq1.mrna1;Target=comp137309_c0_seq1 608 606 .
ChrX	stalkie_big_nohaplotig	exon	85714699	85714714	51	+	.	Parent=comp137309_c0_seq1.mrna1;Target=comp137309_c0_seq1 637 609 .
ChrX	stalkie_big_nohaplotig	CDS	84437041	84437189	.	+	0	Parent=comp137309_c0_seq1.mrna1
ChrX	gffcl	locus	84439334	84449347	.	-	.	ID=RLOC_00004566;geneIDs=FBgn0021873.1.path1,comp137126_c0_seq1.path1;transcripts=FBgn0021873.1.mrna1,comp137126_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84439334	84449347	.	-	.	ID=FBgn0021873.1.mrna1;geneID=FBgn0021873.1.path1;Name=FBgn0021873.1;Dir=sensecoverage=100.0;identity=100.0;matches=4128;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004566
ChrX	stalkie_big_nohaplotig	exon	84439334	84439398	100	-	.	Parent=FBgn0021873.1.mrna1;Target=FBgn0021873.1 4064 4128 +
ChrX	stalkie_big_nohaplotig	exon	84445082	84445225	100	-	.	Parent=FBgn0021873.1.mrna1;Target=FBgn0021873.1 3920 4063 +
ChrX	stalkie_big_nohaplotig	exon	84445290	84448941	100	-	.	Parent=FBgn0021873.1.mrna1;Target=FBgn0021873.1 268 3919 +
ChrX	stalkie_big_nohaplotig	exon	84449002	84449199	100	-	.	Parent=FBgn0021873.1.mrna1;Target=FBgn0021873.1 70 267 +
ChrX	stalkie_big_nohaplotig	exon	84449279	84449347	100	-	.	Parent=FBgn0021873.1.mrna1;Target=FBgn0021873.1 1 69 +
ChrX	stalkie_big_nohaplotig	CDS	84439334	84439398	.	-	2	Parent=FBgn0021873.1.mrna1;Target=FBgn0021873.1 4064 4128 +
ChrX	stalkie_big_nohaplotig	CDS	84445082	84445225	.	-	2	Parent=FBgn0021873.1.mrna1;Target=FBgn0021873.1 3920 4063 +
ChrX	stalkie_big_nohaplotig	CDS	84445290	84448941	.	-	0	Parent=FBgn0021873.1.mrna1;Target=FBgn0021873.1 268 3919 +
ChrX	stalkie_big_nohaplotig	CDS	84449002	84449199	.	-	0	Parent=FBgn0021873.1.mrna1;Target=FBgn0021873.1 70 267 +
ChrX	stalkie_big_nohaplotig	CDS	84449279	84449347	.	-	0	Parent=FBgn0021873.1.mrna1;Target=FBgn0021873.1 1 69 +
ChrX	stalkie_big_nohaplotig	mRNA	84439378	84441001	.	-	.	ID=comp137126_c0_seq1.mrna1;geneID=comp137126_c0_seq1.path1;Name=comp137126_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1624;mismatches=0;indels=0;unknowns=0;Target=comp137126_c0_seq1 1624 1 .;CDS_Target=comp137126_c0_seq1 767 579 .;locus=RLOC_00004566
ChrX	stalkie_big_nohaplotig	exon	84439378	84441001	100	-	.	Parent=comp137126_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	84440235	84440423	.	-	0	Parent=comp137126_c0_seq1.mrna1
ChrX	gffcl	locus	84444079	84444877	.	+	.	ID=RLOC_00004567;geneIDs=comp147802_c0_seq1.path1;transcripts=comp147802_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84444079	84444877	.	+	.	ID=comp147802_c0_seq1.mrna1;geneID=comp147802_c0_seq1.path1;Name=comp147802_c0_seq1;Dir=antisensecoverage=99.6;identity=97.8;matches=724;mismatches=15;indels=1;unknowns=0;Target=comp147802_c0_seq1 51 182 .;locus=RLOC_00004567
ChrX	stalkie_big_nohaplotig	exon	84444079	84444317	98	+	.	Parent=comp147802_c0_seq1.mrna1;Target=comp147802_c0_seq1 504 742 -
ChrX	stalkie_big_nohaplotig	exon	84444377	84444877	97	+	.	Parent=comp147802_c0_seq1.mrna1;Target=comp147802_c0_seq1 4 503 -
ChrX	stalkie_big_nohaplotig	CDS	84444698	84444830	.	+	0	Parent=comp147802_c0_seq1.mrna1
ChrX	gffcl	locus	84467215	84476282	.	+	.	ID=RLOC_00004568;geneIDs=comp159131_c1_seq1.path1;transcripts=comp159131_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84467215	84476282	.	+	.	ID=comp159131_c1_seq1.mrna1;geneID=comp159131_c1_seq1.path1;Name=comp159131_c1_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=1572;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004568
ChrX	stalkie_big_nohaplotig	exon	84467215	84467316	100	+	.	Parent=comp159131_c1_seq1.mrna1;Target=comp159131_c1_seq1 1 102 +
ChrX	stalkie_big_nohaplotig	exon	84467375	84467505	100	+	.	Parent=comp159131_c1_seq1.mrna1;Target=comp159131_c1_seq1 141 271 +
ChrX	stalkie_big_nohaplotig	exon	84467563	84467764	100	+	.	Parent=comp159131_c1_seq1.mrna1;Target=comp159131_c1_seq1 272 473 +
ChrX	stalkie_big_nohaplotig	exon	84475079	84475435	100	+	.	Parent=comp159131_c1_seq1.mrna1;Target=comp159131_c1_seq1 474 830 +
ChrX	stalkie_big_nohaplotig	exon	84475503	84476282	100	+	.	Parent=comp159131_c1_seq1.mrna1;Target=comp159131_c1_seq1 831 1610 +
ChrX	stalkie_big_nohaplotig	CDS	84467282	84467316	.	+	0	Parent=comp159131_c1_seq1.mrna1;Target=comp159131_c1_seq1 68 102 +
ChrX	stalkie_big_nohaplotig	CDS	84467375	84467388	.	+	1	Parent=comp159131_c1_seq1.mrna1;Target=comp159131_c1_seq1 141 154 +
ChrX	gffcl	locus	84469581	84473442	.	-	.	ID=RLOC_00004569;geneIDs=FBgn0037254.1.path1;transcripts=FBgn0037254.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84469581	84473442	.	-	.	ID=FBgn0037254.1.mrna1;geneID=FBgn0037254.1.path1;Name=FBgn0037254.1;Dir=sensecoverage=100.0;identity=100.0;matches=3204;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004569
ChrX	stalkie_big_nohaplotig	exon	84469581	84470219	100	-	.	Parent=FBgn0037254.1.mrna1;Target=FBgn0037254.1 2566 3204 +
ChrX	stalkie_big_nohaplotig	exon	84470878	84473442	100	-	.	Parent=FBgn0037254.1.mrna1;Target=FBgn0037254.1 1 2565 +
ChrX	stalkie_big_nohaplotig	CDS	84469581	84470219	.	-	0	Parent=FBgn0037254.1.mrna1;Target=FBgn0037254.1 2566 3204 +
ChrX	stalkie_big_nohaplotig	CDS	84470878	84473442	.	-	0	Parent=FBgn0037254.1.mrna1;Target=FBgn0037254.1 1 2565 +
ChrX	gffcl	locus	84476434	84476749	.	+	.	ID=RLOC_00004570;geneIDs=comp121544_c0_seq1.path1;transcripts=comp121544_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84476434	84476749	.	+	.	ID=comp121544_c0_seq1.mrna1;geneID=comp121544_c0_seq1.path1;Name=comp121544_c0_seq1;Dir=indeterminatecoverage=81.0;identity=100.0;matches=316;mismatches=0;indels=0;unknowns=0;Target=comp121544_c0_seq1 329 14 .;CDS_Target=comp121544_c0_seq1 263 15 .;locus=RLOC_00004570
ChrX	stalkie_big_nohaplotig	exon	84476434	84476749	100	+	.	Parent=comp121544_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	84476435	84476683	.	+	0	Parent=comp121544_c0_seq1.mrna1
ChrX	gffcl	locus	84476829	84479162	.	.	.	ID=RLOC_00004571;geneIDs=comp115955_c0_seq1.path1,comp159898_c0_seq1.path1;transcripts=comp159898_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84476829	84478571	.	-	.	ID=comp159898_c0_seq1.mrna1;geneID=comp159898_c0_seq1.path1;Name=comp159898_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1743;mismatches=0;indels=5;unknowns=0;Target=comp159898_c0_seq1 1748 1 .;CDS_Target=comp159898_c0_seq1 1168 731 .;locus=RLOC_00004571
ChrX	stalkie_big_nohaplotig	exon	84476829	84478571	99	-	.	Parent=comp159898_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	84477409	84477841	.	-	0	Parent=comp159898_c0_seq1.mrna1
ChrX	gffcl	locus	84479324	84482373	.	-	.	ID=RLOC_00004572;geneIDs=FBgn0261697.1.path1;transcripts=FBgn0261697.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84479324	84482373	.	-	.	ID=FBgn0261697.1.mrna1;geneID=FBgn0261697.1.path1;Name=FBgn0261697.1;Dir=sensecoverage=100.0;identity=100.0;matches=2205;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004572
ChrX	stalkie_big_nohaplotig	exon	84479324	84480654	100	-	.	Parent=FBgn0261697.1.mrna1;Target=FBgn0261697.1 875 2205 +
ChrX	stalkie_big_nohaplotig	exon	84481431	84481587	100	-	.	Parent=FBgn0261697.1.mrna1;Target=FBgn0261697.1 718 874 +
ChrX	stalkie_big_nohaplotig	exon	84481657	84482373	100	-	.	Parent=FBgn0261697.1.mrna1;Target=FBgn0261697.1 1 717 +
ChrX	stalkie_big_nohaplotig	CDS	84479324	84480654	.	-	2	Parent=FBgn0261697.1.mrna1;Target=FBgn0261697.1 875 2205 +
ChrX	stalkie_big_nohaplotig	CDS	84481431	84481587	.	-	0	Parent=FBgn0261697.1.mrna1;Target=FBgn0261697.1 718 874 +
ChrX	stalkie_big_nohaplotig	CDS	84481657	84482373	.	-	0	Parent=FBgn0261697.1.mrna1;Target=FBgn0261697.1 1 717 +
ChrX	gffcl	locus	84482385	84483084	.	-	.	ID=RLOC_00004573;geneIDs=FBgn0261683.1.path1;transcripts=FBgn0261683.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84482385	84483084	.	-	.	ID=FBgn0261683.1.mrna1;geneID=FBgn0261683.1.path1;Name=FBgn0261683.1;Dir=sensecoverage=100.0;identity=100.0;matches=555;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004573
ChrX	stalkie_big_nohaplotig	exon	84482385	84482475	100	-	.	Parent=FBgn0261683.1.mrna1;Target=FBgn0261683.1 465 555 +
ChrX	stalkie_big_nohaplotig	exon	84482555	84482906	100	-	.	Parent=FBgn0261683.1.mrna1;Target=FBgn0261683.1 113 464 +
ChrX	stalkie_big_nohaplotig	exon	84482973	84483084	100	-	.	Parent=FBgn0261683.1.mrna1;Target=FBgn0261683.1 1 112 +
ChrX	stalkie_big_nohaplotig	CDS	84482385	84482475	.	-	1	Parent=FBgn0261683.1.mrna1;Target=FBgn0261683.1 465 555 +
ChrX	stalkie_big_nohaplotig	CDS	84482555	84482906	.	-	2	Parent=FBgn0261683.1.mrna1;Target=FBgn0261683.1 113 464 +
ChrX	stalkie_big_nohaplotig	CDS	84482973	84483084	.	-	0	Parent=FBgn0261683.1.mrna1;Target=FBgn0261683.1 1 112 +
ChrX	gffcl	locus	84486725	84488857	.	+	.	ID=RLOC_00004574;geneIDs=FBgn0031784.1.path1,comp159597_c0_seq1.path1;transcripts=FBgn0031784.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84486725	84488305	.	+	.	ID=FBgn0031784.1.mrna1;geneID=FBgn0031784.1.path1;Name=FBgn0031784.1;Dir=sensecoverage=100.0;identity=100.0;matches=1329;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004574
ChrX	stalkie_big_nohaplotig	exon	84486725	84487488	100	+	.	Parent=FBgn0031784.1.mrna1;Target=FBgn0031784.1 1 764 +
ChrX	stalkie_big_nohaplotig	exon	84487601	84487750	100	+	.	Parent=FBgn0031784.1.mrna1;Target=FBgn0031784.1 765 914 +
ChrX	stalkie_big_nohaplotig	exon	84487805	84487965	100	+	.	Parent=FBgn0031784.1.mrna1;Target=FBgn0031784.1 915 1075 +
ChrX	stalkie_big_nohaplotig	exon	84488052	84488305	100	+	.	Parent=FBgn0031784.1.mrna1;Target=FBgn0031784.1 1076 1329 +
ChrX	stalkie_big_nohaplotig	CDS	84486725	84487488	.	+	0	Parent=FBgn0031784.1.mrna1;Target=FBgn0031784.1 1 764 +
ChrX	stalkie_big_nohaplotig	CDS	84487601	84487750	.	+	1	Parent=FBgn0031784.1.mrna1;Target=FBgn0031784.1 765 914 +
ChrX	stalkie_big_nohaplotig	CDS	84487805	84487965	.	+	1	Parent=FBgn0031784.1.mrna1;Target=FBgn0031784.1 915 1075 +
ChrX	stalkie_big_nohaplotig	CDS	84488052	84488305	.	+	2	Parent=FBgn0031784.1.mrna1;Target=FBgn0031784.1 1076 1329 +
ChrX	gffcl	locus	84528779	84530031	.	-	.	ID=RLOC_00004575;geneIDs=ORF1909.path1;transcripts=ORF1909.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84528779	84530031	.	-	.	ID=ORF1909.mrna1;geneID=ORF1909.path1;Name=ORF1909;Dir=sensecoverage=100.0;identity=99.9;matches=962;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004575
ChrX	stalkie_big_nohaplotig	exon	84528779	84528841	100	-	.	Parent=ORF1909.mrna1;Target=ORF1909 901 963 +
ChrX	stalkie_big_nohaplotig	exon	84528917	84529123	100	-	.	Parent=ORF1909.mrna1;Target=ORF1909 694 900 +
ChrX	stalkie_big_nohaplotig	exon	84529215	84529720	99	-	.	Parent=ORF1909.mrna1;Target=ORF1909 188 693 +
ChrX	stalkie_big_nohaplotig	exon	84529787	84529885	100	-	.	Parent=ORF1909.mrna1;Target=ORF1909 89 187 +
ChrX	stalkie_big_nohaplotig	exon	84529944	84530031	100	-	.	Parent=ORF1909.mrna1;Target=ORF1909 1 88 +
ChrX	stalkie_big_nohaplotig	CDS	84528779	84528841	.	-	0	Parent=ORF1909.mrna1;Target=ORF1909 901 963 +
ChrX	stalkie_big_nohaplotig	CDS	84528917	84529123	.	-	0	Parent=ORF1909.mrna1;Target=ORF1909 694 900 +
ChrX	stalkie_big_nohaplotig	CDS	84529215	84529720	.	-	2	Parent=ORF1909.mrna1;Target=ORF1909 188 693 +
ChrX	stalkie_big_nohaplotig	CDS	84529787	84529885	.	-	2	Parent=ORF1909.mrna1;Target=ORF1909 89 187 +
ChrX	stalkie_big_nohaplotig	CDS	84529944	84530031	.	-	0	Parent=ORF1909.mrna1;Target=ORF1909 1 88 +
ChrX	gffcl	locus	84604447	84604938	.	-	.	ID=RLOC_00004576;geneIDs=FBgn0040950.path1;transcripts=FBgn0040950.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84604447	84604938	.	-	.	ID=FBgn0040950.mrna1;geneID=FBgn0040950.path1;Name=FBgn0040950;Dir=indeterminatecoverage=100.0;identity=100.0;matches=492;mismatches=0;indels=0;unknowns=0;Target=FBgn0040950 492 1 .;locus=RLOC_00004576
ChrX	stalkie_big_nohaplotig	exon	84604447	84604938	100	-	.	Parent=FBgn0040950.mrna1
ChrX	stalkie_big_nohaplotig	CDS	84604447	84604938	.	-	0	Parent=FBgn0040950.mrna1
ChrX	gffcl	locus	84605324	84605520	.	+	.	ID=RLOC_00004577;geneIDs=comp149102_c0_seq1.path1;transcripts=comp149102_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84605324	84605520	.	+	.	ID=comp149102_c0_seq1.mrna1;geneID=comp149102_c0_seq1.path1;Name=comp149102_c0_seq1;Dir=indeterminatecoverage=98.0;identity=96.4;matches=190;mismatches=7;indels=0;unknowns=0;Target=comp149102_c0_seq1 197 1 .;CDS_Target=comp149102_c0_seq1 197 3 .;locus=RLOC_00004577
ChrX	stalkie_big_nohaplotig	exon	84605324	84605520	96	+	.	Parent=comp149102_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	84605326	84605520	.	+	0	Parent=comp149102_c0_seq1.mrna1
ChrX	gffcl	locus	84605959	84606611	.	-	.	ID=RLOC_00004578;geneIDs=comp147458_c0_seq1.path1;transcripts=comp147458_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84605959	84606611	.	-	.	ID=comp147458_c0_seq1.mrna1;geneID=comp147458_c0_seq1.path1;Name=comp147458_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=586;mismatches=0;indels=1;unknowns=0;locus=RLOC_00004578
ChrX	stalkie_big_nohaplotig	exon	84605959	84606446	99	-	.	Parent=comp147458_c0_seq1.mrna1;Target=comp147458_c0_seq1 1 489 -
ChrX	stalkie_big_nohaplotig	exon	84606514	84606611	100	-	.	Parent=comp147458_c0_seq1.mrna1;Target=comp147458_c0_seq1 490 587 -
ChrX	stalkie_big_nohaplotig	CDS	84606005	84606446	.	-	2	Parent=comp147458_c0_seq1.mrna1;Target=comp147458_c0_seq1 47 489 .
ChrX	stalkie_big_nohaplotig	CDS	84606514	84606529	.	-	0	Parent=comp147458_c0_seq1.mrna1;Target=comp147458_c0_seq1 490 505 .
ChrX	gffcl	locus	84616762	84617480	.	+	.	ID=RLOC_00004579;geneIDs=comp110831_c0_seq1.path1;transcripts=comp110831_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84616762	84617480	.	+	.	ID=comp110831_c0_seq1.mrna1;geneID=comp110831_c0_seq1.path1;Name=comp110831_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=657;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004579
ChrX	stalkie_big_nohaplotig	exon	84616762	84616850	100	+	.	Parent=comp110831_c0_seq1.mrna1;Target=comp110831_c0_seq1 1 89 +
ChrX	stalkie_big_nohaplotig	exon	84616913	84617480	100	+	.	Parent=comp110831_c0_seq1.mrna1;Target=comp110831_c0_seq1 90 657 +
ChrX	stalkie_big_nohaplotig	CDS	84616835	84616850	.	+	0	Parent=comp110831_c0_seq1.mrna1;Target=comp110831_c0_seq1 74 89 +
ChrX	stalkie_big_nohaplotig	CDS	84616913	84617478	.	+	2	Parent=comp110831_c0_seq1.mrna1;Target=comp110831_c0_seq1 90 655 +
ChrX	gffcl	locus	84618064	84618456	.	+	.	ID=RLOC_00004580;geneIDs=FBgn0040950.path1;transcripts=FBgn0040950.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84618064	84618456	.	+	.	ID=FBgn0040950.mrna1;geneID=FBgn0040950.path1;Name=FBgn0040950;Dir=indeterminatecoverage=100.0;identity=100.0;matches=393;mismatches=0;indels=0;unknowns=0;Target=FBgn0040950 393 1 .;locus=RLOC_00004580
ChrX	stalkie_big_nohaplotig	exon	84618064	84618456	100	+	.	Parent=FBgn0040950.mrna1
ChrX	stalkie_big_nohaplotig	CDS	84618064	84618456	.	+	0	Parent=FBgn0040950.mrna1
ChrX	gffcl	locus	84650999	84652080	.	-	.	ID=RLOC_00004581;geneIDs=comp154651_c0_seq1.path1;transcripts=comp154651_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84650999	84652080	.	-	.	ID=comp154651_c0_seq1.mrna1;geneID=comp154651_c0_seq1.path1;Name=comp154651_c0_seq1;Dir=indeterminatecoverage=98.5;identity=99.8;matches=1080;mismatches=2;indels=0;unknowns=0;Target=comp154651_c0_seq1 1099 18 .;CDS_Target=comp154651_c0_seq1 521 372 .;locus=RLOC_00004581
ChrX	stalkie_big_nohaplotig	exon	84650999	84652080	99	-	.	Parent=comp154651_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	84651577	84651726	.	-	0	Parent=comp154651_c0_seq1.mrna1
ChrX	gffcl	locus	84705455	84714193	.	-	.	ID=RLOC_00004582;geneIDs=FBgn0086694.2.path1;transcripts=FBgn0086694.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84705455	84714193	.	-	.	ID=FBgn0086694.2.mrna1;geneID=FBgn0086694.2.path1;Name=FBgn0086694.2;Dir=sensecoverage=100.0;identity=97.8;matches=2706;mismatches=14;indels=48;unknowns=100;locus=RLOC_00004582
ChrX	stalkie_big_nohaplotig	exon	84705455	84706382	95	-	.	Parent=FBgn0086694.2.mrna1;Target=FBgn0086694.2 1905 2868 +
ChrX	stalkie_big_nohaplotig	exon	84706782	84706986	94	-	.	Parent=FBgn0086694.2.mrna1;Target=FBgn0086694.2 1691 1904 +
ChrX	stalkie_big_nohaplotig	exon	84707940	84708144	99	-	.	Parent=FBgn0086694.2.mrna1;Target=FBgn0086694.2 1486 1690 +
ChrX	stalkie_big_nohaplotig	exon	84712639	84713070	100	-	.	Parent=FBgn0086694.2.mrna1;Target=FBgn0086694.2 1054 1485 +
ChrX	stalkie_big_nohaplotig	exon	84713144	84714193	99	-	.	Parent=FBgn0086694.2.mrna1;Target=FBgn0086694.2 1 1053 +
ChrX	stalkie_big_nohaplotig	CDS	84705455	84706382	.	-	1	Parent=FBgn0086694.2.mrna1;Target=FBgn0086694.2 1905 2868 +
ChrX	stalkie_big_nohaplotig	CDS	84706782	84706986	.	-	2	Parent=FBgn0086694.2.mrna1;Target=FBgn0086694.2 1691 1904 +
ChrX	stalkie_big_nohaplotig	CDS	84707940	84708144	.	-	0	Parent=FBgn0086694.2.mrna1;Target=FBgn0086694.2 1486 1690 +
ChrX	stalkie_big_nohaplotig	CDS	84712639	84713070	.	-	0	Parent=FBgn0086694.2.mrna1;Target=FBgn0086694.2 1054 1485 +
ChrX	stalkie_big_nohaplotig	CDS	84713144	84714193	.	-	0	Parent=FBgn0086694.2.mrna1;Target=FBgn0086694.2 1 1053 +
ChrX	gffcl	locus	84735800	84737057	.	-	.	ID=RLOC_00004583;geneIDs=FBgn0038049.2.path1;transcripts=FBgn0038049.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84735800	84737057	.	-	.	ID=FBgn0038049.2.mrna1;geneID=FBgn0038049.2.path1;Name=FBgn0038049.2;Dir=sensecoverage=99.9;identity=99.7;matches=1115;mismatches=3;indels=0;unknowns=0;locus=RLOC_00004583
ChrX	stalkie_big_nohaplotig	exon	84735800	84736026	100	-	.	Parent=FBgn0038049.2.mrna1;Target=FBgn0038049.2 893 1119 +
ChrX	stalkie_big_nohaplotig	exon	84736107	84736886	99	-	.	Parent=FBgn0038049.2.mrna1;Target=FBgn0038049.2 113 892 +
ChrX	stalkie_big_nohaplotig	exon	84736947	84737057	98	-	.	Parent=FBgn0038049.2.mrna1;Target=FBgn0038049.2 2 112 +
ChrX	stalkie_big_nohaplotig	CDS	84735800	84736026	.	-	2	Parent=FBgn0038049.2.mrna1;Target=FBgn0038049.2 893 1119 +
ChrX	stalkie_big_nohaplotig	CDS	84736107	84736886	.	-	2	Parent=FBgn0038049.2.mrna1;Target=FBgn0038049.2 113 892 +
ChrX	stalkie_big_nohaplotig	CDS	84736947	84737055	.	-	0	Parent=FBgn0038049.2.mrna1;Target=FBgn0038049.2 4 112 +
ChrX	gffcl	locus	84913854	84915291	.	-	.	ID=RLOC_00004584;geneIDs=comp153536_c0_seq1.path1;transcripts=comp153536_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84913854	84915291	.	-	.	ID=comp153536_c0_seq1.mrna1;geneID=comp153536_c0_seq1.path1;Name=comp153536_c0_seq1;Dir=indeterminatecoverage=98.7;identity=99.8;matches=1436;mismatches=2;indels=1;unknowns=0;Target=comp153536_c0_seq1 1457 19 .;CDS_Target=comp153536_c0_seq1 1109 876 .;locus=RLOC_00004584
ChrX	stalkie_big_nohaplotig	exon	84913854	84915291	99	-	.	Parent=comp153536_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	84914201	84914434	.	-	0	Parent=comp153536_c0_seq1.mrna1
ChrX	gffcl	locus	84957188	84959411	.	+	.	ID=RLOC_00004585;geneIDs=comp160992_c0_seq1.path2;transcripts=comp160992_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	84957188	84959411	.	+	.	ID=comp160992_c0_seq1.mrna2;geneID=comp160992_c0_seq1.path2;Name=comp160992_c0_seq1;Dir=antisensecoverage=99.9;identity=99.5;matches=1368;mismatches=4;indels=3;unknowns=0;locus=RLOC_00004585
ChrX	stalkie_big_nohaplotig	exon	84957188	84957686	99	+	.	Parent=comp160992_c0_seq1.mrna2;Target=comp160992_c0_seq1 877 1375 -
ChrX	stalkie_big_nohaplotig	exon	84958477	84958733	100	+	.	Parent=comp160992_c0_seq1.mrna2;Target=comp160992_c0_seq1 620 876 -
ChrX	stalkie_big_nohaplotig	exon	84958796	84959411	99	+	.	Parent=comp160992_c0_seq1.mrna2;Target=comp160992_c0_seq1 1 619 -
ChrX	stalkie_big_nohaplotig	CDS	84958512	84958733	.	+	0	Parent=comp160992_c0_seq1.mrna2;Target=comp160992_c0_seq1 620 841 .
ChrX	stalkie_big_nohaplotig	CDS	84958796	84958813	.	+	0	Parent=comp160992_c0_seq1.mrna2;Target=comp160992_c0_seq1 602 619 .
ChrX	gffcl	locus	84967460	84969682	.	-	.	ID=RLOC_00004586;geneIDs=comp160992_c0_seq1.path1;transcripts=comp160992_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84967460	84969682	.	-	.	ID=comp160992_c0_seq1.mrna1;geneID=comp160992_c0_seq1.path1;Name=comp160992_c0_seq1;Dir=antisensecoverage=99.8;identity=99.7;matches=1369;mismatches=1;indels=3;unknowns=0;locus=RLOC_00004586
ChrX	stalkie_big_nohaplotig	exon	84967460	84968075	99	-	.	Parent=comp160992_c0_seq1.mrna1;Target=comp160992_c0_seq1 1 619 -
ChrX	stalkie_big_nohaplotig	exon	84968138	84968394	100	-	.	Parent=comp160992_c0_seq1.mrna1;Target=comp160992_c0_seq1 620 876 -
ChrX	stalkie_big_nohaplotig	exon	84969186	84969682	99	-	.	Parent=comp160992_c0_seq1.mrna1;Target=comp160992_c0_seq1 877 1373 -
ChrX	stalkie_big_nohaplotig	CDS	84968058	84968075	.	-	0	Parent=comp160992_c0_seq1.mrna1;Target=comp160992_c0_seq1 602 619 .
ChrX	stalkie_big_nohaplotig	CDS	84968138	84968359	.	-	0	Parent=comp160992_c0_seq1.mrna1;Target=comp160992_c0_seq1 620 841 .
ChrX	gffcl	locus	84991892	84992680	.	-	.	ID=RLOC_00004587;geneIDs=comp101141_c0_seq1.path1;transcripts=comp101141_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	84991892	84992680	.	-	.	ID=comp101141_c0_seq1.mrna1;geneID=comp101141_c0_seq1.path1;Name=comp101141_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=789;mismatches=0;indels=0;unknowns=0;Target=comp101141_c0_seq1 789 1 .;CDS_Target=comp101141_c0_seq1 724 533 .;locus=RLOC_00004587
ChrX	stalkie_big_nohaplotig	exon	84991892	84992680	100	-	.	Parent=comp101141_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	84991957	84992148	.	-	0	Parent=comp101141_c0_seq1.mrna1
ChrX	gffcl	locus	85092329	85094058	.	+	.	ID=RLOC_00004589;geneIDs=comp153568_c0_seq1.path1;transcripts=comp153568_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	85092329	85094058	.	+	.	ID=comp153568_c0_seq1.mrna1;geneID=comp153568_c0_seq1.path1;Name=comp153568_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1730;mismatches=0;indels=0;unknowns=0;Target=comp153568_c0_seq1 1730 1 .;CDS_Target=comp153568_c0_seq1 449 315 .;locus=RLOC_00004589
ChrX	stalkie_big_nohaplotig	exon	85092329	85094058	100	+	.	Parent=comp153568_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	85092643	85092777	.	+	0	Parent=comp153568_c0_seq1.mrna1
ChrX	gffcl	locus	85094335	85094635	.	-	.	ID=RLOC_00004590;geneIDs=comp73880_c0_seq1.path1;transcripts=comp73880_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	85094335	85094635	.	-	.	ID=comp73880_c0_seq1.mrna1;geneID=comp73880_c0_seq1.path1;Name=comp73880_c0_seq1;Dir=indeterminatecoverage=97.7;identity=99.7;matches=300;mismatches=1;indels=0;unknowns=0;Target=comp73880_c0_seq1 301 1 .;CDS_Target=comp73880_c0_seq1 95 3 .;locus=RLOC_00004590
ChrX	stalkie_big_nohaplotig	exon	85094335	85094635	99	-	.	Parent=comp73880_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	85094541	85094633	.	-	0	Parent=comp73880_c0_seq1.mrna1
ChrX	gffcl	locus	85143569	85147199	.	+	.	ID=RLOC_00004591;geneIDs=comp143520_c0_seq1.path1;transcripts=comp143520_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	85143569	85147199	.	+	.	ID=comp143520_c0_seq1.mrna1;geneID=comp143520_c0_seq1.path1;Name=comp143520_c0_seq1;Dir=sensecoverage=99.7;identity=100.0;matches=1065;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004591
ChrX	stalkie_big_nohaplotig	exon	85143569	85144076	100	+	.	Parent=comp143520_c0_seq1.mrna1;Target=comp143520_c0_seq1 2 509 +
ChrX	stalkie_big_nohaplotig	exon	85146643	85147199	100	+	.	Parent=comp143520_c0_seq1.mrna1;Target=comp143520_c0_seq1 510 1066 +
ChrX	stalkie_big_nohaplotig	CDS	85143914	85144076	.	+	0	Parent=comp143520_c0_seq1.mrna1;Target=comp143520_c0_seq1 347 509 +
ChrX	stalkie_big_nohaplotig	CDS	85146643	85147001	.	+	2	Parent=comp143520_c0_seq1.mrna1;Target=comp143520_c0_seq1 510 868 +
ChrX	gffcl	locus	85169141	85170985	.	.	.	ID=RLOC_00004592;geneIDs=ORF1383.path1,comp146406_c0_seq1.path1;transcripts=ORF1383.mrna1,comp146406_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	85169141	85170985	.	-	.	ID=ORF1383.mrna1;geneID=ORF1383.path1;Name=ORF1383;Dir=sensecoverage=100.0;identity=100.0;matches=1119;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004592
ChrX	stalkie_big_nohaplotig	exon	85169141	85169824	100	-	.	Parent=ORF1383.mrna1;Target=ORF1383 436 1119 +
ChrX	stalkie_big_nohaplotig	exon	85169926	85170119	100	-	.	Parent=ORF1383.mrna1;Target=ORF1383 242 435 +
ChrX	stalkie_big_nohaplotig	exon	85170681	85170782	100	-	.	Parent=ORF1383.mrna1;Target=ORF1383 140 241 +
ChrX	stalkie_big_nohaplotig	exon	85170847	85170985	100	-	.	Parent=ORF1383.mrna1;Target=ORF1383 1 139 +
ChrX	stalkie_big_nohaplotig	CDS	85169141	85169824	.	-	0	Parent=ORF1383.mrna1;Target=ORF1383 436 1119 +
ChrX	stalkie_big_nohaplotig	CDS	85169926	85170119	.	-	2	Parent=ORF1383.mrna1;Target=ORF1383 242 435 +
ChrX	stalkie_big_nohaplotig	CDS	85170681	85170782	.	-	2	Parent=ORF1383.mrna1;Target=ORF1383 140 241 +
ChrX	stalkie_big_nohaplotig	CDS	85170847	85170985	.	-	0	Parent=ORF1383.mrna1;Target=ORF1383 1 139 +
ChrX	stalkie_big_nohaplotig	mRNA	85170244	85170703	.	+	.	ID=comp146406_c0_seq1.mrna1;geneID=comp146406_c0_seq1.path1;Name=comp146406_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=453;mismatches=7;indels=0;unknowns=0;Target=comp146406_c0_seq1 460 1 .;CDS_Target=comp146406_c0_seq1 104 3 .;locus=RLOC_00004592
ChrX	stalkie_big_nohaplotig	exon	85170244	85170703	98	+	.	Parent=comp146406_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	85170246	85170347	.	+	0	Parent=comp146406_c0_seq1.mrna1
ChrX	gffcl	locus	85238530	85240405	.	-	.	ID=RLOC_00004593;geneIDs=ORF2999.path1,comp133483_c0_seq1.path1;transcripts=comp133483_c0_seq1.mrna1,ORF2999.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	85238530	85240405	.	-	.	ID=comp133483_c0_seq1.mrna1;geneID=comp133483_c0_seq1.path1;Name=comp133483_c0_seq1;Dir=antisensecoverage=99.9;identity=99.9;matches=1558;mismatches=2;indels=0;unknowns=0;Target=comp133483_c0_seq1 1091 1459 .;locus=RLOC_00004593
ChrX	stalkie_big_nohaplotig	exon	85238530	85238668	100	-	.	Parent=comp133483_c0_seq1.mrna1;Target=comp133483_c0_seq1 1 139 -
ChrX	stalkie_big_nohaplotig	exon	85238852	85239365	99	-	.	Parent=comp133483_c0_seq1.mrna1;Target=comp133483_c0_seq1 148 661 -
ChrX	stalkie_big_nohaplotig	exon	85239426	85239698	100	-	.	Parent=comp133483_c0_seq1.mrna1;Target=comp133483_c0_seq1 662 934 -
ChrX	stalkie_big_nohaplotig	exon	85239772	85240405	100	-	.	Parent=comp133483_c0_seq1.mrna1;Target=comp133483_c0_seq1 935 1568 -
ChrX	stalkie_big_nohaplotig	CDS	85239928	85240296	.	-	0	Parent=comp133483_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	85239352	85240332	.	-	.	ID=ORF2999.mrna1;geneID=ORF2999.path1;Name=ORF2999;Dir=sensecoverage=100.0;identity=100.0;matches=780;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004593
ChrX	stalkie_big_nohaplotig	exon	85239352	85239365	100	-	.	Parent=ORF2999.mrna1;Target=ORF2999 767 780 +
ChrX	stalkie_big_nohaplotig	exon	85239426	85239698	100	-	.	Parent=ORF2999.mrna1;Target=ORF2999 494 766 +
ChrX	stalkie_big_nohaplotig	exon	85239772	85239873	100	-	.	Parent=ORF2999.mrna1;Target=ORF2999 392 493 +
ChrX	stalkie_big_nohaplotig	exon	85239942	85240332	100	-	.	Parent=ORF2999.mrna1;Target=ORF2999 1 391 +
ChrX	stalkie_big_nohaplotig	CDS	85239352	85239365	.	-	2	Parent=ORF2999.mrna1;Target=ORF2999 767 780 +
ChrX	stalkie_big_nohaplotig	CDS	85239426	85239698	.	-	2	Parent=ORF2999.mrna1;Target=ORF2999 494 766 +
ChrX	stalkie_big_nohaplotig	CDS	85239772	85239873	.	-	2	Parent=ORF2999.mrna1;Target=ORF2999 392 493 +
ChrX	stalkie_big_nohaplotig	CDS	85239942	85240332	.	-	0	Parent=ORF2999.mrna1;Target=ORF2999 1 391 +
ChrX	gffcl	locus	85343575	85348922	.	-	.	ID=RLOC_00004594;geneIDs=comp158149_c0_seq1.path1;transcripts=comp158149_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	85343575	85348922	.	-	.	ID=comp158149_c0_seq1.mrna1;geneID=comp158149_c0_seq1.path1;Name=comp158149_c0_seq1;Dir=sensecoverage=98.9;identity=99.4;matches=1582;mismatches=8;indels=2;unknowns=0;locus=RLOC_00004594
ChrX	stalkie_big_nohaplotig	exon	85343575	85344072	100	-	.	Parent=comp158149_c0_seq1.mrna1;Target=comp158149_c0_seq1 1113 1610 +
ChrX	stalkie_big_nohaplotig	exon	85347409	85347938	98	-	.	Parent=comp158149_c0_seq1.mrna1;Target=comp158149_c0_seq1 582 1112 +
ChrX	stalkie_big_nohaplotig	exon	85347996	85348197	100	-	.	Parent=comp158149_c0_seq1.mrna1;Target=comp158149_c0_seq1 380 581 +
ChrX	stalkie_big_nohaplotig	exon	85348280	85348381	100	-	.	Parent=comp158149_c0_seq1.mrna1;Target=comp158149_c0_seq1 278 379 +
ChrX	stalkie_big_nohaplotig	exon	85348665	85348922	99	-	.	Parent=comp158149_c0_seq1.mrna1;Target=comp158149_c0_seq1 19 277 +
ChrX	stalkie_big_nohaplotig	CDS	85347926	85347938	.	-	1	Parent=comp158149_c0_seq1.mrna1;Target=comp158149_c0_seq1 582 594 +
ChrX	stalkie_big_nohaplotig	CDS	85347996	85348197	.	-	2	Parent=comp158149_c0_seq1.mrna1;Target=comp158149_c0_seq1 380 581 +
ChrX	stalkie_big_nohaplotig	CDS	85348280	85348381	.	-	2	Parent=comp158149_c0_seq1.mrna1;Target=comp158149_c0_seq1 278 379 +
ChrX	stalkie_big_nohaplotig	CDS	85348665	85348731	.	-	0	Parent=comp158149_c0_seq1.mrna1;Target=comp158149_c0_seq1 211 277 +
ChrX	gffcl	locus	85453554	85454246	.	+	.	ID=RLOC_00004595;geneIDs=AAEL015143.1.path1;transcripts=AAEL015143.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	85453554	85454246	.	+	.	ID=AAEL015143.1.mrna1;geneID=AAEL015143.1.path1;Name=AAEL015143.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=693;mismatches=0;indels=0;unknowns=0;Target=AAEL015143.1 693 1 .;locus=RLOC_00004595
ChrX	stalkie_big_nohaplotig	exon	85453554	85454246	100	+	.	Parent=AAEL015143.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	85453554	85454246	.	+	0	Parent=AAEL015143.1.mrna1
ChrX	gffcl	locus	85540026	85540874	.	-	.	ID=RLOC_00004596;geneIDs=comp1210531_c0_seq1.path1;transcripts=comp1210531_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	85540026	85540874	.	-	.	ID=comp1210531_c0_seq1.mrna1;geneID=comp1210531_c0_seq1.path1;Name=comp1210531_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=768;mismatches=0;indels=0;unknowns=0;Target=comp1210531_c0_seq1 552 767 .;locus=RLOC_00004596
ChrX	stalkie_big_nohaplotig	exon	85540026	85540166	100	-	.	Parent=comp1210531_c0_seq1.mrna1;Target=comp1210531_c0_seq1 1 141 -
ChrX	stalkie_big_nohaplotig	exon	85540248	85540874	100	-	.	Parent=comp1210531_c0_seq1.mrna1;Target=comp1210531_c0_seq1 142 768 -
ChrX	stalkie_big_nohaplotig	CDS	85540658	85540873	.	-	0	Parent=comp1210531_c0_seq1.mrna1
ChrX	gffcl	locus	85597966	85598784	.	-	.	ID=RLOC_00004597;geneIDs=comp112874_c0_seq1.path1;transcripts=comp112874_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	85597966	85598784	.	-	.	ID=comp112874_c0_seq1.mrna1;geneID=comp112874_c0_seq1.path1;Name=comp112874_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=819;mismatches=0;indels=0;unknowns=0;Target=comp112874_c0_seq1 819 1 .;CDS_Target=comp112874_c0_seq1 652 476 .;locus=RLOC_00004597
ChrX	stalkie_big_nohaplotig	exon	85597966	85598784	100	-	.	Parent=comp112874_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	85598133	85598309	.	-	0	Parent=comp112874_c0_seq1.mrna1
ChrX	gffcl	locus	85634389	85635501	.	-	.	ID=RLOC_00004598;geneIDs=comp156689_c0_seq1.path1;transcripts=comp156689_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	85634389	85635501	.	-	.	ID=comp156689_c0_seq1.mrna1;geneID=comp156689_c0_seq1.path1;Name=comp156689_c0_seq1;Dir=indeterminatecoverage=88.9;identity=99.0;matches=1106;mismatches=7;indels=4;unknowns=0;Target=comp156689_c0_seq1 1256 140 .;CDS_Target=comp156689_c0_seq1 865 734 .;locus=RLOC_00004598
ChrX	stalkie_big_nohaplotig	exon	85634389	85635501	99	-	.	Parent=comp156689_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	85634779	85634910	.	-	0	Parent=comp156689_c0_seq1.mrna1
ChrX	gffcl	locus	85636680	85637049	.	-	.	ID=RLOC_00004599;geneIDs=comp118341_c0_seq1.path1;transcripts=comp118341_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	85636680	85637049	.	-	.	ID=comp118341_c0_seq1.mrna1;geneID=comp118341_c0_seq1.path1;Name=comp118341_c0_seq1;Dir=indeterminatecoverage=97.6;identity=99.7;matches=370;mismatches=0;indels=1;unknowns=0;Target=comp118341_c0_seq1 371 1 .;CDS_Target=comp118341_c0_seq1 239 108 .;locus=RLOC_00004599
ChrX	stalkie_big_nohaplotig	exon	85636680	85637049	99	-	.	Parent=comp118341_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	85636812	85636943	.	-	0	Parent=comp118341_c0_seq1.mrna1
ChrX	gffcl	locus	85658102	85658532	.	+	.	ID=RLOC_00004600;geneIDs=comp134884_c0_seq1.path1;transcripts=comp134884_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	85658102	85658532	.	+	.	ID=comp134884_c0_seq1.mrna1;geneID=comp134884_c0_seq1.path1;Name=comp134884_c0_seq1;Dir=indeterminatecoverage=99.5;identity=100.0;matches=431;mismatches=0;indels=0;unknowns=0;Target=comp134884_c0_seq1 433 3 .;CDS_Target=comp134884_c0_seq1 64 5 .;locus=RLOC_00004600
ChrX	stalkie_big_nohaplotig	exon	85658102	85658532	100	+	.	Parent=comp134884_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	85658104	85658163	.	+	0	Parent=comp134884_c0_seq1.mrna1
ChrX	gffcl	locus	85679222	85680856	.	+	.	ID=RLOC_00004601;geneIDs=comp148401_c0_seq1.path1;transcripts=comp148401_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	85679222	85680856	.	+	.	ID=comp148401_c0_seq1.mrna1;geneID=comp148401_c0_seq1.path1;Name=comp148401_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=399;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004601
ChrX	stalkie_big_nohaplotig	exon	85679222	85679277	98	+	.	Parent=comp148401_c0_seq1.mrna1;Target=comp148401_c0_seq1 1 56 +
ChrX	stalkie_big_nohaplotig	exon	85680513	85680856	100	+	.	Parent=comp148401_c0_seq1.mrna1;Target=comp148401_c0_seq1 57 400 +
ChrX	stalkie_big_nohaplotig	CDS	85679224	85679277	.	+	0	Parent=comp148401_c0_seq1.mrna1;Target=comp148401_c0_seq1 3 56 +
ChrX	stalkie_big_nohaplotig	CDS	85680513	85680551	.	+	0	Parent=comp148401_c0_seq1.mrna1;Target=comp148401_c0_seq1 57 95 +
ChrX	gffcl	locus	85729679	85730296	.	-	.	ID=RLOC_00004604;geneIDs=comp106793_c0_seq1.path1;transcripts=comp106793_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	85729679	85730296	.	-	.	ID=comp106793_c0_seq1.mrna1;geneID=comp106793_c0_seq1.path1;Name=comp106793_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.0;matches=612;mismatches=6;indels=0;unknowns=0;Target=comp106793_c0_seq1 625 8 .;CDS_Target=comp106793_c0_seq1 100 8 .;locus=RLOC_00004604
ChrX	stalkie_big_nohaplotig	exon	85729679	85730296	99	-	.	Parent=comp106793_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	85730204	85730296	.	-	0	Parent=comp106793_c0_seq1.mrna1
ChrX	gffcl	locus	85730863	85731226	.	+	.	ID=RLOC_00004605;geneIDs=comp137066_c0_seq1.path1;transcripts=comp137066_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	85730863	85731226	.	+	.	ID=comp137066_c0_seq1.mrna1;geneID=comp137066_c0_seq1.path1;Name=comp137066_c0_seq1;Dir=indeterminatecoverage=92.9;identity=100.0;matches=364;mismatches=0;indels=0;unknowns=0;Target=comp137066_c0_seq1 364 1 .;CDS_Target=comp137066_c0_seq1 175 2 .;locus=RLOC_00004605
ChrX	stalkie_big_nohaplotig	exon	85730863	85731226	100	+	.	Parent=comp137066_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	85730864	85731037	.	+	0	Parent=comp137066_c0_seq1.mrna1
ChrX	gffcl	locus	85732757	85734181	.	-	.	ID=RLOC_00004606;geneIDs=comp155341_c0_seq1.path1;transcripts=comp155341_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	85732757	85734181	.	-	.	ID=comp155341_c0_seq1.mrna1;geneID=comp155341_c0_seq1.path1;Name=comp155341_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=1425;mismatches=0;indels=0;unknowns=0;Target=comp155341_c0_seq1 1425 1 .;CDS_Target=comp155341_c0_seq1 790 611 .;locus=RLOC_00004606
ChrX	stalkie_big_nohaplotig	exon	85732757	85734181	100	-	.	Parent=comp155341_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	85733392	85733571	.	-	0	Parent=comp155341_c0_seq1.mrna1
ChrX	gffcl	locus	85734880	85735972	.	+	.	ID=RLOC_00004607;geneIDs=comp157637_c0_seq1.path1;transcripts=comp157637_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	85734880	85735972	.	+	.	ID=comp157637_c0_seq1.mrna1;geneID=comp157637_c0_seq1.path1;Name=comp157637_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1081;mismatches=2;indels=2;unknowns=0;Target=comp157637_c0_seq1 967 800 .;locus=RLOC_00004607
ChrX	stalkie_big_nohaplotig	exon	85734880	85735033	100	+	.	Parent=comp157637_c0_seq1.mrna1;Target=comp157637_c0_seq1 154 1 .
ChrX	stalkie_big_nohaplotig	exon	85735041	85735049	100	+	.	Parent=comp157637_c0_seq1.mrna1;Target=comp157637_c0_seq1 211 203 .
ChrX	stalkie_big_nohaplotig	exon	85735052	85735972	99	+	.	Parent=comp157637_c0_seq1.mrna1;Target=comp157637_c0_seq1 1168 248 .
ChrX	stalkie_big_nohaplotig	CDS	85735604	85735771	.	+	0	Parent=comp157637_c0_seq1.mrna1
ChrX	gffcl	locus	85860850	85861448	.	-	.	ID=RLOC_00004609;geneIDs=comp143453_c0_seq1.path1;transcripts=comp143453_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	85860850	85861448	.	-	.	ID=comp143453_c0_seq1.mrna1;geneID=comp143453_c0_seq1.path1;Name=comp143453_c0_seq1;Dir=antisensecoverage=95.9;identity=100.0;matches=511;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004609
ChrX	stalkie_big_nohaplotig	exon	85860850	85861177	100	-	.	Parent=comp143453_c0_seq1.mrna1;Target=comp143453_c0_seq1 23 350 -
ChrX	stalkie_big_nohaplotig	exon	85861266	85861448	100	-	.	Parent=comp143453_c0_seq1.mrna1;Target=comp143453_c0_seq1 351 533 -
ChrX	stalkie_big_nohaplotig	CDS	85860971	85861177	.	-	0	Parent=comp143453_c0_seq1.mrna1;Target=comp143453_c0_seq1 144 350 .
ChrX	stalkie_big_nohaplotig	CDS	85861266	85861361	.	-	0	Parent=comp143453_c0_seq1.mrna1;Target=comp143453_c0_seq1 351 446 .
ChrX	gffcl	locus	85909638	85910510	.	+	.	ID=RLOC_00004610;geneIDs=comp113861_c0_seq1.path1;transcripts=comp113861_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	85909638	85910510	.	+	.	ID=comp113861_c0_seq1.mrna1;geneID=comp113861_c0_seq1.path1;Name=comp113861_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=871;mismatches=2;indels=0;unknowns=0;Target=comp113861_c0_seq1 873 1 .;CDS_Target=comp113861_c0_seq1 214 2 .;locus=RLOC_00004610
ChrX	stalkie_big_nohaplotig	exon	85909638	85910510	99	+	.	Parent=comp113861_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	85909639	85909851	.	+	0	Parent=comp113861_c0_seq1.mrna1
ChrX	gffcl	locus	85910652	85913079	.	-	.	ID=RLOC_00004611;geneIDs=comp151144_c0_seq1.path1;transcripts=comp151144_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	85910652	85913079	.	-	.	ID=comp151144_c0_seq1.mrna1;geneID=comp151144_c0_seq1.path1;Name=comp151144_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=1673;mismatches=4;indels=5;unknowns=0;Target=comp151144_c0_seq1 590 1027 +;locus=RLOC_00004611
ChrX	stalkie_big_nohaplotig	exon	85910652	85911172	99	-	.	Parent=comp151144_c0_seq1.mrna1;Target=comp151144_c0_seq1 1157 1677 +
ChrX	stalkie_big_nohaplotig	exon	85911919	85913079	99	-	.	Parent=comp151144_c0_seq1.mrna1;Target=comp151144_c0_seq1 1 1156 +
ChrX	stalkie_big_nohaplotig	CDS	85912048	85912485	.	-	0	Parent=comp151144_c0_seq1.mrna1
ChrX	gffcl	locus	86043379	86045356	.	-	.	ID=RLOC_00004612;geneIDs=comp162682_c1_seq1.path1;transcripts=comp162682_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86043379	86045356	.	-	.	ID=comp162682_c1_seq1.mrna1;geneID=comp162682_c1_seq1.path1;Name=comp162682_c1_seq1;Dir=indeterminatecoverage=100.0;identity=96.4;matches=1907;mismatches=66;indels=5;unknowns=0;Target=comp162682_c1_seq1 1973 1 .;CDS_Target=comp162682_c1_seq1 873 1 .;locus=RLOC_00004612
ChrX	stalkie_big_nohaplotig	exon	86043379	86045356	96	-	.	Parent=comp162682_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	86044479	86045356	.	-	0	Parent=comp162682_c1_seq1.mrna1
ChrX	gffcl	locus	86049589	87886745	.	+	.	ID=RLOC_00004614;geneIDs=comp119212_c0_seq1.path2;transcripts=comp119212_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	86049589	87886745	.	+	.	ID=comp119212_c0_seq1.mrna2;geneID=comp119212_c0_seq1.path2;Name=comp119212_c0_seq1;Dir=indeterminatecoverage=87.3;identity=97.5;matches=273;mismatches=3;indels=4;unknowns=0;Target=comp119212_c0_seq1 83 57 .;locus=RLOC_00004614
ChrX	stalkie_big_nohaplotig	exon	86049589	86049847	97	+	.	Parent=comp119212_c0_seq1.mrna2;Target=comp119212_c0_seq1 255 1 .
ChrX	stalkie_big_nohaplotig	exon	87858384	87858387	100	+	.	Parent=comp119212_c0_seq1.mrna2;Target=comp119212_c0_seq1 259 256 .
ChrX	stalkie_big_nohaplotig	exon	87864608	87864611	100	+	.	Parent=comp119212_c0_seq1.mrna2;Target=comp119212_c0_seq1 263 260 .
ChrX	stalkie_big_nohaplotig	exon	87872781	87872782	100	+	.	Parent=comp119212_c0_seq1.mrna2;Target=comp119212_c0_seq1 265 264 .
ChrX	stalkie_big_nohaplotig	exon	87880821	87880827	100	+	.	Parent=comp119212_c0_seq1.mrna2;Target=comp119212_c0_seq1 272 266 .
ChrX	stalkie_big_nohaplotig	exon	87886742	87886745	100	+	.	Parent=comp119212_c0_seq1.mrna2;Target=comp119212_c0_seq1 276 273 .
ChrX	stalkie_big_nohaplotig	CDS	86049645	86049672	.	+	0	Parent=comp119212_c0_seq1.mrna2
ChrX	gffcl	locus	86053252	86054546	.	-	.	ID=RLOC_00004615;geneIDs=comp161749_c4_seq1.path1;transcripts=comp161749_c4_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86053252	86054546	.	-	.	ID=comp161749_c4_seq1.mrna1;geneID=comp161749_c4_seq1.path1;Name=comp161749_c4_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1283;mismatches=12;indels=0;unknowns=0;Target=comp161749_c4_seq1 1295 1 .;CDS_Target=comp161749_c4_seq1 1274 1029 .;locus=RLOC_00004615
ChrX	stalkie_big_nohaplotig	exon	86053252	86054546	99	-	.	Parent=comp161749_c4_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	86053273	86053518	.	-	0	Parent=comp161749_c4_seq1.mrna1
ChrX	gffcl	locus	86062219	86063584	.	-	.	ID=RLOC_00004616;geneIDs=comp150214_c0_seq1.path1;transcripts=comp150214_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86062219	86063584	.	-	.	ID=comp150214_c0_seq1.mrna1;geneID=comp150214_c0_seq1.path1;Name=comp150214_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1363;mismatches=3;indels=0;unknowns=0;Target=comp150214_c0_seq1 1366 1 .;CDS_Target=comp150214_c0_seq1 1111 803 .;locus=RLOC_00004616
ChrX	stalkie_big_nohaplotig	exon	86062219	86063584	99	-	.	Parent=comp150214_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	86062474	86062782	.	-	0	Parent=comp150214_c0_seq1.mrna1
ChrX	gffcl	locus	86065635	86067025	.	-	.	ID=RLOC_00004617;geneIDs=comp161379_c0_seq1.path1;transcripts=comp161379_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86065635	86067025	.	-	.	ID=comp161379_c0_seq1.mrna1;geneID=comp161379_c0_seq1.path1;Name=comp161379_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1379;mismatches=11;indels=2;unknowns=0;Target=comp161379_c0_seq1 1391 1 .;CDS_Target=comp161379_c0_seq1 260 126 .;locus=RLOC_00004617
ChrX	stalkie_big_nohaplotig	exon	86065635	86067025	99	-	.	Parent=comp161379_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	86066766	86066900	.	-	0	Parent=comp161379_c0_seq1.mrna1
ChrX	gffcl	locus	86085274	86090359	.	-	.	ID=RLOC_00004618;geneIDs=ORF451.path1,comp100394_c0_seq1.path1;transcripts=ORF451.mrna1,comp100394_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86085274	86090359	.	-	.	ID=ORF451.mrna1;geneID=ORF451.path1;Name=ORF451;Dir=sensecoverage=100.0;identity=99.4;matches=1784;mismatches=10;indels=0;unknowns=0;locus=RLOC_00004618
ChrX	stalkie_big_nohaplotig	exon	86085274	86086248	99	-	.	Parent=ORF451.mrna1;Target=ORF451 820 1794 +
ChrX	stalkie_big_nohaplotig	exon	86086301	86086417	98	-	.	Parent=ORF451.mrna1;Target=ORF451 703 819 +
ChrX	stalkie_big_nohaplotig	exon	86086501	86086674	98	-	.	Parent=ORF451.mrna1;Target=ORF451 529 702 +
ChrX	stalkie_big_nohaplotig	exon	86088504	86088656	99	-	.	Parent=ORF451.mrna1;Target=ORF451 376 528 +
ChrX	stalkie_big_nohaplotig	exon	86088748	86088903	98	-	.	Parent=ORF451.mrna1;Target=ORF451 220 375 +
ChrX	stalkie_big_nohaplotig	exon	86090141	86090359	99	-	.	Parent=ORF451.mrna1;Target=ORF451 1 219 +
ChrX	stalkie_big_nohaplotig	CDS	86085274	86086248	.	-	0	Parent=ORF451.mrna1;Target=ORF451 820 1794 +
ChrX	stalkie_big_nohaplotig	CDS	86086301	86086417	.	-	0	Parent=ORF451.mrna1;Target=ORF451 703 819 +
ChrX	stalkie_big_nohaplotig	CDS	86086501	86086674	.	-	0	Parent=ORF451.mrna1;Target=ORF451 529 702 +
ChrX	stalkie_big_nohaplotig	CDS	86088504	86088656	.	-	0	Parent=ORF451.mrna1;Target=ORF451 376 528 +
ChrX	stalkie_big_nohaplotig	CDS	86088748	86088903	.	-	0	Parent=ORF451.mrna1;Target=ORF451 220 375 +
ChrX	stalkie_big_nohaplotig	CDS	86090141	86090359	.	-	0	Parent=ORF451.mrna1;Target=ORF451 1 219 +
ChrX	stalkie_big_nohaplotig	mRNA	86086651	86088523	.	-	.	ID=comp100394_c0_seq1.mrna1;geneID=comp100394_c0_seq1.path1;Name=comp100394_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=273;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004618
ChrX	stalkie_big_nohaplotig	exon	86086651	86086674	100	-	.	Parent=comp100394_c0_seq1.mrna1;Target=comp100394_c0_seq1 250 273 +
ChrX	stalkie_big_nohaplotig	exon	86086740	86086968	100	-	.	Parent=comp100394_c0_seq1.mrna1;Target=comp100394_c0_seq1 21 249 +
ChrX	stalkie_big_nohaplotig	exon	86088504	86088523	100	-	.	Parent=comp100394_c0_seq1.mrna1;Target=comp100394_c0_seq1 1 20 +
ChrX	stalkie_big_nohaplotig	CDS	86086943	86086968	.	-	2	Parent=comp100394_c0_seq1.mrna1;Target=comp100394_c0_seq1 21 46 +
ChrX	stalkie_big_nohaplotig	CDS	86088504	86088522	.	-	0	Parent=comp100394_c0_seq1.mrna1;Target=comp100394_c0_seq1 2 20 +
ChrX	gffcl	locus	86132522	86209556	.	+	.	ID=RLOC_00004619;geneIDs=comp154255_c2_seq1.path1;transcripts=comp154255_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86132522	86209556	.	+	.	ID=comp154255_c2_seq1.mrna1;geneID=comp154255_c2_seq1.path1;Name=comp154255_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=812;mismatches=3;indels=0;unknowns=0;Target=comp154255_c2_seq1 114 1 .;locus=RLOC_00004619
ChrX	stalkie_big_nohaplotig	exon	86132522	86132688	98	+	.	Parent=comp154255_c2_seq1.mrna1;Target=comp154255_c2_seq1 167 1 .
ChrX	stalkie_big_nohaplotig	exon	86208909	86209556	99	+	.	Parent=comp154255_c2_seq1.mrna1;Target=comp154255_c2_seq1 815 168 .
ChrX	stalkie_big_nohaplotig	CDS	86132522	86132635	.	+	0	Parent=comp154255_c2_seq1.mrna1
ChrX	gffcl	locus	86135033	86135473	.	+	.	ID=RLOC_00004620;geneIDs=comp148130_c1_seq1.path1;transcripts=comp148130_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86135033	86135473	.	+	.	ID=comp148130_c1_seq1.mrna1;geneID=comp148130_c1_seq1.path1;Name=comp148130_c1_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=434;mismatches=7;indels=7;unknowns=0;Target=comp148130_c1_seq1 448 1 .;CDS_Target=comp148130_c1_seq1 347 204 .;locus=RLOC_00004620
ChrX	stalkie_big_nohaplotig	exon	86135033	86135473	96	+	.	Parent=comp148130_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	86135229	86135372	.	+	0	Parent=comp148130_c1_seq1.mrna1
ChrX	gffcl	locus	86219004	86221110	.	-	.	ID=RLOC_00004621;geneIDs=ORF344.path1;transcripts=ORF344.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86219004	86221110	.	-	.	ID=ORF344.mrna1;geneID=ORF344.path1;Name=ORF344;Dir=sensecoverage=99.9;identity=100.0;matches=1979;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004621
ChrX	stalkie_big_nohaplotig	exon	86219004	86220302	100	-	.	Parent=ORF344.mrna1;Target=ORF344 682 1980 +
ChrX	stalkie_big_nohaplotig	exon	86220376	86220622	100	-	.	Parent=ORF344.mrna1;Target=ORF344 435 681 +
ChrX	stalkie_big_nohaplotig	exon	86220678	86221110	100	-	.	Parent=ORF344.mrna1;Target=ORF344 2 434 +
ChrX	stalkie_big_nohaplotig	CDS	86219004	86220302	.	-	0	Parent=ORF344.mrna1;Target=ORF344 682 1980 +
ChrX	stalkie_big_nohaplotig	CDS	86220376	86220622	.	-	1	Parent=ORF344.mrna1;Target=ORF344 435 681 +
ChrX	stalkie_big_nohaplotig	CDS	86220678	86221108	.	-	0	Parent=ORF344.mrna1;Target=ORF344 4 434 +
ChrX	gffcl	locus	86235279	86236538	.	-	.	ID=RLOC_00004622;geneIDs=FBgn0039711.2.path3;transcripts=FBgn0039711.2.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	86235279	86236538	.	-	.	ID=FBgn0039711.2.mrna3;geneID=FBgn0039711.2.path3;Name=FBgn0039711.2;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1258;mismatches=2;indels=0;unknowns=0;Target=FBgn0039711.2 1260 1 .;locus=RLOC_00004622
ChrX	stalkie_big_nohaplotig	exon	86235279	86236538	99	-	.	Parent=FBgn0039711.2.mrna3
ChrX	stalkie_big_nohaplotig	CDS	86235279	86236538	.	-	0	Parent=FBgn0039711.2.mrna3
ChrX	gffcl	locus	86255531	86255629	.	+	.	ID=RLOC_00004623;geneIDs=comp1653752_c0_seq1.path2;transcripts=comp1653752_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	86255531	86255629	.	+	.	ID=comp1653752_c0_seq1.mrna2;geneID=comp1653752_c0_seq1.path2;Name=comp1653752_c0_seq1;Dir=indeterminatecoverage=47.4;identity=83.8;matches=83;mismatches=16;indels=0;unknowns=0;Target=comp1653752_c0_seq1 141 43 .;locus=RLOC_00004623
ChrX	stalkie_big_nohaplotig	exon	86255531	86255629	83	+	.	Parent=comp1653752_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	86255531	86255629	.	+	0	Parent=comp1653752_c0_seq1.mrna2
ChrX	gffcl	locus	86322069	86322810	.	+	.	ID=RLOC_00004624;geneIDs=comp161870_c0_seq1.path3;transcripts=comp161870_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	86322069	86322810	.	+	.	ID=comp161870_c0_seq1.mrna3;geneID=comp161870_c0_seq1.path3;Name=comp161870_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=734;mismatches=8;indels=13;unknowns=0;Target=comp161870_c0_seq1 755 1 .;CDS_Target=comp161870_c0_seq1 316 206 .;locus=RLOC_00004624
ChrX	stalkie_big_nohaplotig	exon	86322069	86322810	97	+	.	Parent=comp161870_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	CDS	86322274	86322383	.	+	0	Parent=comp161870_c0_seq1.mrna3
ChrX	gffcl	locus	86351874	86352464	.	-	.	ID=RLOC_00004625;geneIDs=comp158790_c0_seq1.path1;transcripts=comp158790_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86351874	86352464	.	-	.	ID=comp158790_c0_seq1.mrna1;geneID=comp158790_c0_seq1.path1;Name=comp158790_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=585;mismatches=6;indels=0;unknowns=0;Target=comp158790_c0_seq1 591 1 .;CDS_Target=comp158790_c0_seq1 590 522 .;locus=RLOC_00004625
ChrX	stalkie_big_nohaplotig	exon	86351874	86352464	98	-	.	Parent=comp158790_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	86351875	86351943	.	-	0	Parent=comp158790_c0_seq1.mrna1
ChrX	gffcl	locus	86353870	86354444	.	+	.	ID=RLOC_00004626;geneIDs=comp157348_c0_seq1.path1;transcripts=comp157348_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86353870	86354444	.	+	.	ID=comp157348_c0_seq1.mrna1;geneID=comp157348_c0_seq1.path1;Name=comp157348_c0_seq1;Dir=indeterminatecoverage=93.6;identity=99.5;matches=572;mismatches=3;indels=0;unknowns=0;Target=comp157348_c0_seq1 614 40 .;CDS_Target=comp157348_c0_seq1 588 280 .;locus=RLOC_00004626
ChrX	stalkie_big_nohaplotig	exon	86353870	86354444	99	+	.	Parent=comp157348_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	86354110	86354418	.	+	0	Parent=comp157348_c0_seq1.mrna1
ChrX	gffcl	locus	86359943	86361244	.	-	.	ID=RLOC_00004627;geneIDs=ORF1849.path1;transcripts=ORF1849.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86359943	86361244	.	-	.	ID=ORF1849.mrna1;geneID=ORF1849.path1;Name=ORF1849;Dir=sensecoverage=99.6;identity=100.0;matches=977;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004627
ChrX	stalkie_big_nohaplotig	exon	86359943	86360839	100	-	.	Parent=ORF1849.mrna1;Target=ORF1849 81 977 +
ChrX	stalkie_big_nohaplotig	exon	86361165	86361244	100	-	.	Parent=ORF1849.mrna1;Target=ORF1849 1 80 +
ChrX	stalkie_big_nohaplotig	CDS	86359945	86360839	.	-	1	Parent=ORF1849.mrna1;Target=ORF1849 81 975 +
ChrX	stalkie_big_nohaplotig	CDS	86361165	86361244	.	-	0	Parent=ORF1849.mrna1;Target=ORF1849 1 80 +
ChrX	gffcl	locus	86367473	86368794	.	-	.	ID=RLOC_00004628;geneIDs=ORF956.path1;transcripts=ORF956.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86367473	86368794	.	-	.	ID=ORF956.mrna1;geneID=ORF956.path1;Name=ORF956;Dir=indeterminatecoverage=100.0;identity=98.0;matches=1301;mismatches=20;indels=6;unknowns=0;Target=ORF956 1326 1 .;locus=RLOC_00004628
ChrX	stalkie_big_nohaplotig	exon	86367473	86368794	98	-	.	Parent=ORF956.mrna1
ChrX	stalkie_big_nohaplotig	CDS	86367473	86368794	.	-	0	Parent=ORF956.mrna1
ChrX	gffcl	locus	86369304	86440979	.	+	.	ID=RLOC_00004629;geneIDs=comp152311_c0_seq1.path2;transcripts=comp152311_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	86369304	86440979	.	+	.	ID=comp152311_c0_seq1.mrna2;geneID=comp152311_c0_seq1.path2;Name=comp152311_c0_seq1;Dir=indeterminatecoverage=99.7;identity=92.1;matches=583;mismatches=12;indels=38;unknowns=0;locus=RLOC_00004629
ChrX	stalkie_big_nohaplotig	exon	86369304	86369389	97	+	.	Parent=comp152311_c0_seq1.mrna2;Target=comp152311_c0_seq1 86 1 .
ChrX	stalkie_big_nohaplotig	exon	86440439	86440979	91	+	.	Parent=comp152311_c0_seq1.mrna2;Target=comp152311_c0_seq1 601 87 .
ChrX	stalkie_big_nohaplotig	CDS	86369306	86369389	.	+	0	Parent=comp152311_c0_seq1.mrna2;Target=comp152311_c0_seq1 86 3 .
ChrX	stalkie_big_nohaplotig	CDS	86440439	86440532	.	+	0	Parent=comp152311_c0_seq1.mrna2;Target=comp152311_c0_seq1 179 87 .
ChrX	gffcl	locus	86419006	86419547	.	+	.	ID=RLOC_00004630;geneIDs=comp72093_c0_seq1.path1,comp72093_c0_seq1.path2;transcripts=comp72093_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86419006	86419547	.	+	.	ID=comp72093_c0_seq1.mrna1;geneID=comp72093_c0_seq1.path1;Name=comp72093_c0_seq1;Dir=indeterminatecoverage=78.3;identity=99.8;matches=541;mismatches=1;indels=0;unknowns=0;Target=comp72093_c0_seq1 542 1 .;CDS_Target=comp72093_c0_seq1 218 135 .;locus=RLOC_00004630
ChrX	stalkie_big_nohaplotig	exon	86419006	86419547	99	+	.	Parent=comp72093_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	86419140	86419223	.	+	0	Parent=comp72093_c0_seq1.mrna1
ChrX	gffcl	locus	86420421	86421284	.	-	.	ID=RLOC_00004631;geneIDs=ORF2409.path1;transcripts=ORF2409.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86420421	86421284	.	-	.	ID=ORF2409.mrna1;geneID=ORF2409.path1;Name=ORF2409;Dir=indeterminatecoverage=100.0;identity=100.0;matches=864;mismatches=0;indels=0;unknowns=0;Target=ORF2409 864 1 .;locus=RLOC_00004631
ChrX	stalkie_big_nohaplotig	exon	86420421	86421284	100	-	.	Parent=ORF2409.mrna1
ChrX	stalkie_big_nohaplotig	CDS	86420421	86421284	.	-	0	Parent=ORF2409.mrna1
ChrX	gffcl	locus	86421339	86422749	.	-	.	ID=RLOC_00004632;geneIDs=comp149692_c0_seq1.path1;transcripts=comp149692_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86421339	86422749	.	-	.	ID=comp149692_c0_seq1.mrna1;geneID=comp149692_c0_seq1.path1;Name=comp149692_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=1344;mismatches=0;indels=0;unknowns=0;Target=comp149692_c0_seq1 231 521 +;locus=RLOC_00004632
ChrX	stalkie_big_nohaplotig	exon	86421339	86422464	100	-	.	Parent=comp149692_c0_seq1.mrna1;Target=comp149692_c0_seq1 219 1344 +
ChrX	stalkie_big_nohaplotig	exon	86422532	86422749	100	-	.	Parent=comp149692_c0_seq1.mrna1;Target=comp149692_c0_seq1 1 218 +
ChrX	stalkie_big_nohaplotig	CDS	86422162	86422452	.	-	0	Parent=comp149692_c0_seq1.mrna1
ChrX	gffcl	locus	86423178	86569459	.	-	.	ID=RLOC_00004633;geneIDs=comp149784_c1_seq1.path1;transcripts=comp149784_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86423178	86569459	.	-	.	ID=comp149784_c1_seq1.mrna1;geneID=comp149784_c1_seq1.path1;Name=comp149784_c1_seq1;Dir=sensecoverage=96.1;identity=99.4;matches=885;mismatches=1;indels=4;unknowns=0;locus=RLOC_00004633
ChrX	stalkie_big_nohaplotig	exon	86423178	86423808	99	-	.	Parent=comp149784_c1_seq1.mrna1;Target=comp149784_c1_seq1 292 926 +
ChrX	stalkie_big_nohaplotig	exon	86569205	86569459	100	-	.	Parent=comp149784_c1_seq1.mrna1;Target=comp149784_c1_seq1 37 291 +
ChrX	stalkie_big_nohaplotig	CDS	86423759	86423808	.	-	2	Parent=comp149784_c1_seq1.mrna1;Target=comp149784_c1_seq1 292 341 +
ChrX	stalkie_big_nohaplotig	CDS	86569205	86569307	.	-	0	Parent=comp149784_c1_seq1.mrna1;Target=comp149784_c1_seq1 189 291 +
ChrX	gffcl	locus	86426652	88320183	.	.	.	ID=RLOC_00004634;geneIDs=comp122299_c0_seq1.path1,comp156518_c3_seq1.path1;transcripts=comp122299_c0_seq1.mrna1,comp156518_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86426652	88320183	.	-	.	ID=comp122299_c0_seq1.mrna1;geneID=comp122299_c0_seq1.path1;Name=comp122299_c0_seq1;Dir=indeterminatecoverage=89.5;identity=93.8;matches=2000;mismatches=68;indels=65;unknowns=10;locus=RLOC_00004634
ChrX	stalkie_big_nohaplotig	exon	86426652	86426660	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 2213 2205 .
ChrX	stalkie_big_nohaplotig	exon	86430215	86430222	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 2204 2197 .
ChrX	stalkie_big_nohaplotig	exon	86432565	86432568	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 2196 2193 .
ChrX	stalkie_big_nohaplotig	exon	86435490	86435495	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 2192 2187 .
ChrX	stalkie_big_nohaplotig	exon	86439313	86439328	87	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 2186 2171 .
ChrX	stalkie_big_nohaplotig	exon	86444344	86444360	68	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 2170 2146 .
ChrX	stalkie_big_nohaplotig	exon	86447385	86447445	54	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 2140 2071 .
ChrX	stalkie_big_nohaplotig	exon	86462259	86462268	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 2037 2028 .
ChrX	stalkie_big_nohaplotig	exon	86470290	86470330	50	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 2027 1975 .
ChrX	stalkie_big_nohaplotig	exon	86471680	86471689	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1974 1965 .
ChrX	stalkie_big_nohaplotig	exon	86473067	86473075	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1964 1956 .
ChrX	stalkie_big_nohaplotig	exon	86473683	86473692	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1914 1905 .
ChrX	stalkie_big_nohaplotig	exon	86475329	86475334	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1904 1899 .
ChrX	stalkie_big_nohaplotig	exon	86477729	86477795	44	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1898 1849 .
ChrX	stalkie_big_nohaplotig	exon	86482401	86482407	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1826 1820 .
ChrX	stalkie_big_nohaplotig	exon	86484730	86484738	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1819 1811 .
ChrX	stalkie_big_nohaplotig	exon	86486125	86486148	83	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1810 1788 .
ChrX	stalkie_big_nohaplotig	exon	86494028	86494030	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1787 1785 .
ChrX	stalkie_big_nohaplotig	exon	86498255	86498262	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1784 1777 .
ChrX	stalkie_big_nohaplotig	exon	86514112	86514149	57	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1776 1745 .
ChrX	stalkie_big_nohaplotig	exon	86521733	86521734	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1744 1743 .
ChrX	stalkie_big_nohaplotig	exon	86529749	86529750	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1742 1741 .
ChrX	stalkie_big_nohaplotig	exon	86535365	86535370	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1740 1735 .
ChrX	stalkie_big_nohaplotig	exon	86540019	86540022	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1734 1731 .
ChrX	stalkie_big_nohaplotig	exon	86540281	86540288	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1730 1723 .
ChrX	stalkie_big_nohaplotig	exon	86545894	86545904	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1722 1712 .
ChrX	stalkie_big_nohaplotig	exon	86549698	86549707	80	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1711 1702 .
ChrX	stalkie_big_nohaplotig	exon	86550148	86550156	88	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1701 1693 .
ChrX	stalkie_big_nohaplotig	exon	86554739	86554740	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1692 1691 .
ChrX	stalkie_big_nohaplotig	exon	86561582	86561595	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1690 1677 .
ChrX	stalkie_big_nohaplotig	exon	86561686	86561690	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1676 1672 .
ChrX	stalkie_big_nohaplotig	exon	86569461	86569462	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1671 1670 .
ChrX	stalkie_big_nohaplotig	exon	86570492	86570502	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1669 1659 .
ChrX	stalkie_big_nohaplotig	exon	86584580	86584585	100	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1658 1653 .
ChrX	stalkie_big_nohaplotig	exon	88318534	88320183	99	-	.	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1652 1 .
ChrX	stalkie_big_nohaplotig	CDS	86549703	86549707	.	-	2	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1706 1702 .
ChrX	stalkie_big_nohaplotig	CDS	86550148	86550156	.	-	2	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1701 1693 .
ChrX	stalkie_big_nohaplotig	CDS	86554739	86554740	.	-	1	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1692 1691 .
ChrX	stalkie_big_nohaplotig	CDS	86561582	86561595	.	-	0	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1690 1677 .
ChrX	stalkie_big_nohaplotig	CDS	86561686	86561690	.	-	2	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1676 1672 .
ChrX	stalkie_big_nohaplotig	CDS	86569461	86569462	.	-	1	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1671 1670 .
ChrX	stalkie_big_nohaplotig	CDS	86570492	86570502	.	-	0	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1669 1659 .
ChrX	stalkie_big_nohaplotig	CDS	86584580	86584585	.	-	0	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1658 1653 .
ChrX	stalkie_big_nohaplotig	CDS	88318534	88318656	.	-	0	Parent=comp122299_c0_seq1.mrna1;Target=comp122299_c0_seq1 1652 1530 .
ChrX	stalkie_big_nohaplotig	mRNA	86485405	86486218	.	+	.	ID=comp156518_c3_seq1.mrna1;geneID=comp156518_c3_seq1.path1;Name=comp156518_c3_seq1;Dir=indeterminatecoverage=85.3;identity=96.9;matches=790;mismatches=24;indels=1;unknowns=0;Target=comp156518_c3_seq1 815 1 .;CDS_Target=comp156518_c3_seq1 390 163 .;locus=RLOC_00004634
ChrX	stalkie_big_nohaplotig	exon	86485405	86486218	96	+	.	Parent=comp156518_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	86485567	86485794	.	+	0	Parent=comp156518_c3_seq1.mrna1
ChrX	gffcl	locus	86471683	86472128	.	+	.	ID=RLOC_00004636;geneIDs=comp117809_c0_seq1.path1;transcripts=comp117809_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86471683	86472128	.	+	.	ID=comp117809_c0_seq1.mrna1;geneID=comp117809_c0_seq1.path1;Name=comp117809_c0_seq1;Dir=antisensecoverage=99.7;identity=99.7;matches=383;mismatches=1;indels=0;unknowns=0;Target=comp117809_c0_seq1 52 285 .;locus=RLOC_00004636
ChrX	stalkie_big_nohaplotig	exon	86471683	86471772	100	+	.	Parent=comp117809_c0_seq1.mrna1;Target=comp117809_c0_seq1 295 384 -
ChrX	stalkie_big_nohaplotig	exon	86471835	86472128	99	+	.	Parent=comp117809_c0_seq1.mrna1;Target=comp117809_c0_seq1 1 294 -
ChrX	stalkie_big_nohaplotig	CDS	86471844	86472077	.	+	0	Parent=comp117809_c0_seq1.mrna1
ChrX	gffcl	locus	86476789	86477132	.	+	.	ID=RLOC_00004637;geneIDs=comp162442_c1_seq1.path5;transcripts=comp162442_c1_seq1.mrna5
ChrX	stalkie_big_nohaplotig	mRNA	86476789	86477132	.	+	.	ID=comp162442_c1_seq1.mrna5;geneID=comp162442_c1_seq1.path5;Name=comp162442_c1_seq1;Dir=indeterminatecoverage=100.0;identity=88.4;matches=304;mismatches=13;indels=27;unknowns=0;Target=comp162442_c1_seq1 317 1 .;CDS_Target=comp162442_c1_seq1 55 2 .;locus=RLOC_00004637
ChrX	stalkie_big_nohaplotig	exon	86476789	86477132	88	+	.	Parent=comp162442_c1_seq1.mrna5
ChrX	stalkie_big_nohaplotig	CDS	86476790	86476843	.	+	0	Parent=comp162442_c1_seq1.mrna5
ChrX	gffcl	locus	86502402	86503041	.	+	.	ID=RLOC_00004638;geneIDs=comp100363_c0_seq1.path2;transcripts=comp100363_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	86502402	86503041	.	+	.	ID=comp100363_c0_seq1.mrna2;geneID=comp100363_c0_seq1.path2;Name=comp100363_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=640;mismatches=0;indels=0;unknowns=0;Target=comp100363_c0_seq1 640 1 .;CDS_Target=comp100363_c0_seq1 218 42 .;locus=RLOC_00004638
ChrX	stalkie_big_nohaplotig	exon	86502402	86503041	100	+	.	Parent=comp100363_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	86502443	86502619	.	+	0	Parent=comp100363_c0_seq1.mrna2
ChrX	gffcl	locus	86527178	86527817	.	-	.	ID=RLOC_00004639;geneIDs=comp100363_c0_seq1.path3;transcripts=comp100363_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	86527178	86527817	.	-	.	ID=comp100363_c0_seq1.mrna3;geneID=comp100363_c0_seq1.path3;Name=comp100363_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=640;mismatches=0;indels=0;unknowns=0;Target=comp100363_c0_seq1 640 1 .;CDS_Target=comp100363_c0_seq1 218 42 .;locus=RLOC_00004639
ChrX	stalkie_big_nohaplotig	exon	86527178	86527817	100	-	.	Parent=comp100363_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	CDS	86527600	86527776	.	-	0	Parent=comp100363_c0_seq1.mrna3
ChrX	gffcl	locus	86570012	86571639	.	+	.	ID=RLOC_00004640;geneIDs=comp147065_c0_seq1.path1;transcripts=comp147065_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86570012	86571639	.	+	.	ID=comp147065_c0_seq1.mrna1;geneID=comp147065_c0_seq1.path1;Name=comp147065_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=845;mismatches=4;indels=2;unknowns=0;locus=RLOC_00004640
ChrX	stalkie_big_nohaplotig	exon	86570012	86570463	100	+	.	Parent=comp147065_c0_seq1.mrna1;Target=comp147065_c0_seq1 1 452 +
ChrX	stalkie_big_nohaplotig	exon	86570543	86570863	98	+	.	Parent=comp147065_c0_seq1.mrna1;Target=comp147065_c0_seq1 453 771 +
ChrX	stalkie_big_nohaplotig	exon	86571562	86571639	100	+	.	Parent=comp147065_c0_seq1.mrna1;Target=comp147065_c0_seq1 772 849 +
ChrX	stalkie_big_nohaplotig	CDS	86570413	86570463	.	+	0	Parent=comp147065_c0_seq1.mrna1;Target=comp147065_c0_seq1 402 452 +
ChrX	stalkie_big_nohaplotig	CDS	86570543	86570557	.	+	0	Parent=comp147065_c0_seq1.mrna1;Target=comp147065_c0_seq1 453 467 +
ChrX	gffcl	locus	86577172	86687256	.	-	.	ID=RLOC_00004641;geneIDs=comp161913_c0_seq1.path2;transcripts=comp161913_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	86577172	86687256	.	-	.	ID=comp161913_c0_seq1.mrna2;geneID=comp161913_c0_seq1.path2;Name=comp161913_c0_seq1;Dir=indeterminatecoverage=96.2;identity=96.3;matches=972;mismatches=35;indels=2;unknowns=0;Target=comp161913_c0_seq1 499 476 .;locus=RLOC_00004641
ChrX	stalkie_big_nohaplotig	exon	86577172	86577294	91	-	.	Parent=comp161913_c0_seq1.mrna2;Target=comp161913_c0_seq1 1049 927 .
ChrX	stalkie_big_nohaplotig	exon	86646493	86646500	100	-	.	Parent=comp161913_c0_seq1.mrna2;Target=comp161913_c0_seq1 926 919 .
ChrX	stalkie_big_nohaplotig	exon	86683856	86683859	100	-	.	Parent=comp161913_c0_seq1.mrna2;Target=comp161913_c0_seq1 918 915 .
ChrX	stalkie_big_nohaplotig	exon	86686385	86687256	97	-	.	Parent=comp161913_c0_seq1.mrna2;Target=comp161913_c0_seq1 914 41 .
ChrX	stalkie_big_nohaplotig	CDS	86686800	86686821	.	-	0	Parent=comp161913_c0_seq1.mrna2
ChrX	gffcl	locus	86604808	86605248	.	-	.	ID=RLOC_00004642;geneIDs=comp148130_c1_seq1.path2;transcripts=comp148130_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	86604808	86605248	.	-	.	ID=comp148130_c1_seq1.mrna2;geneID=comp148130_c1_seq1.path2;Name=comp148130_c1_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=434;mismatches=7;indels=7;unknowns=0;Target=comp148130_c1_seq1 448 1 .;CDS_Target=comp148130_c1_seq1 347 204 .;locus=RLOC_00004642
ChrX	stalkie_big_nohaplotig	exon	86604808	86605248	96	-	.	Parent=comp148130_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	86604909	86605052	.	-	0	Parent=comp148130_c1_seq1.mrna2
ChrX	gffcl	locus	86726312	86727471	.	+	.	ID=RLOC_00004643;geneIDs=FBgn0031747.1.path2;transcripts=FBgn0031747.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	86726312	86727471	.	+	.	ID=FBgn0031747.1.mrna2;geneID=FBgn0031747.1.path2;Name=FBgn0031747.1;Dir=sensecoverage=100.0;identity=100.0;matches=1092;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004643
ChrX	stalkie_big_nohaplotig	exon	86726312	86726768	100	+	.	Parent=FBgn0031747.1.mrna2;Target=FBgn0031747.1 1 457 +
ChrX	stalkie_big_nohaplotig	exon	86726837	86727471	100	+	.	Parent=FBgn0031747.1.mrna2;Target=FBgn0031747.1 458 1092 +
ChrX	stalkie_big_nohaplotig	CDS	86726312	86726768	.	+	0	Parent=FBgn0031747.1.mrna2;Target=FBgn0031747.1 1 457 +
ChrX	stalkie_big_nohaplotig	CDS	86726837	86727471	.	+	2	Parent=FBgn0031747.1.mrna2;Target=FBgn0031747.1 458 1092 +
ChrX	gffcl	locus	86803525	86805891	.	+	.	ID=RLOC_00004644;geneIDs=FBgn0031235.3.path1;transcripts=FBgn0031235.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86803525	86805891	.	+	.	ID=FBgn0031235.3.mrna1;geneID=FBgn0031235.3.path1;Name=FBgn0031235.3;Dir=sensecoverage=100.0;identity=100.0;matches=1284;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004644
ChrX	stalkie_big_nohaplotig	exon	86803525	86804086	100	+	.	Parent=FBgn0031235.3.mrna1;Target=FBgn0031235.3 1 562 +
ChrX	stalkie_big_nohaplotig	exon	86805170	86805891	100	+	.	Parent=FBgn0031235.3.mrna1;Target=FBgn0031235.3 563 1284 +
ChrX	stalkie_big_nohaplotig	CDS	86803525	86804086	.	+	0	Parent=FBgn0031235.3.mrna1;Target=FBgn0031235.3 1 562 +
ChrX	stalkie_big_nohaplotig	CDS	86805170	86805891	.	+	2	Parent=FBgn0031235.3.mrna1;Target=FBgn0031235.3 563 1284 +
ChrX	gffcl	locus	86877528	86878329	.	-	.	ID=RLOC_00004645;geneIDs=FBgn0032030.1.path1;transcripts=FBgn0032030.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86877528	86878329	.	-	.	ID=FBgn0032030.1.mrna1;geneID=FBgn0032030.1.path1;Name=FBgn0032030.1;Dir=indeterminatecoverage=59.9;identity=99.8;matches=800;mismatches=2;indels=0;unknowns=0;Target=FBgn0032030.1 1338 537 .;CDS_Target=FBgn0032030.1 1338 538 .;locus=RLOC_00004645
ChrX	stalkie_big_nohaplotig	exon	86877528	86878329	99	-	.	Parent=FBgn0032030.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	86877528	86878328	.	-	0	Parent=FBgn0032030.1.mrna1
ChrX	gffcl	locus	86904455	86907085	.	+	.	ID=RLOC_00004646;geneIDs=ORF302.path3,comp160431_c0_seq1.path2;transcripts=ORF302.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	86904455	86906538	.	+	.	ID=ORF302.mrna3;geneID=ORF302.path3;Name=ORF302;Dir=indeterminatecoverage=100.0;identity=98.6;matches=2067;mismatches=15;indels=14;unknowns=0;Target=ORF302 2094 1 .;CDS_Target=ORF302 2094 556 .;locus=RLOC_00004646
ChrX	stalkie_big_nohaplotig	exon	86904455	86906538	98	+	.	Parent=ORF302.mrna3
ChrX	stalkie_big_nohaplotig	CDS	86905009	86906538	.	+	0	Parent=ORF302.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	86908323	86908918	.	-	.	ID=comp116815_c0_seq1.mrna1;geneID=comp116815_c0_seq1.path1;Name=comp116815_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=465;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004647
ChrX	stalkie_big_nohaplotig	exon	86908323	86908622	100	-	.	Parent=comp116815_c0_seq1.mrna1;Target=comp116815_c0_seq1 166 465 +
ChrX	stalkie_big_nohaplotig	exon	86908687	86908827	100	-	.	Parent=comp116815_c0_seq1.mrna1;Target=comp116815_c0_seq1 25 165 +
ChrX	stalkie_big_nohaplotig	exon	86908895	86908918	100	-	.	Parent=comp116815_c0_seq1.mrna1;Target=comp116815_c0_seq1 1 24 +
ChrX	stalkie_big_nohaplotig	CDS	86908789	86908827	.	-	0	Parent=comp116815_c0_seq1.mrna1;Target=comp116815_c0_seq1 25 63 +
ChrX	stalkie_big_nohaplotig	CDS	86908895	86908918	.	-	0	Parent=comp116815_c0_seq1.mrna1;Target=comp116815_c0_seq1 1 24 +
ChrX	stalkie_big_nohaplotig	mRNA	86909593	86910401	.	+	.	ID=comp143723_c0_seq1.mrna1;geneID=comp143723_c0_seq1.path1;Name=comp143723_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=808;mismatches=1;indels=0;unknowns=0;Target=comp143723_c0_seq1 809 1 .;CDS_Target=comp143723_c0_seq1 140 3 .;locus=RLOC_00004647
ChrX	stalkie_big_nohaplotig	exon	86909593	86910401	99	+	.	Parent=comp143723_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	86909595	86909732	.	+	0	Parent=comp143723_c0_seq1.mrna1
ChrX	gffcl	locus	86931384	86932082	.	+	.	ID=RLOC_00004648;geneIDs=Dv_FBgn0209813.1.path10;transcripts=Dv_FBgn0209813.1.mrna10
ChrX	stalkie_big_nohaplotig	mRNA	86931384	86932082	.	+	.	ID=Dv_FBgn0209813.1.mrna10;geneID=Dv_FBgn0209813.1.path10;Name=Dv_FBgn0209813.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=695;mismatches=4;indels=0;unknowns=0;Target=Dv_FBgn0209813.1 699 1 .;locus=RLOC_00004648
ChrX	stalkie_big_nohaplotig	exon	86931384	86932082	99	+	.	Parent=Dv_FBgn0209813.1.mrna10
ChrX	stalkie_big_nohaplotig	CDS	86931384	86932082	.	+	0	Parent=Dv_FBgn0209813.1.mrna10
ChrX	gffcl	locus	86945027	86945526	.	-	.	ID=RLOC_00004649;geneIDs=comp144779_c0_seq1.path1;transcripts=comp144779_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86945027	86945526	.	-	.	ID=comp144779_c0_seq1.mrna1;geneID=comp144779_c0_seq1.path1;Name=comp144779_c0_seq1;Dir=antisensecoverage=99.8;identity=99.8;matches=426;mismatches=1;indels=0;unknowns=0;Target=comp144779_c0_seq1 124 342 .;locus=RLOC_00004649
ChrX	stalkie_big_nohaplotig	exon	86945027	86945371	100	-	.	Parent=comp144779_c0_seq1.mrna1;Target=comp144779_c0_seq1 1 345 -
ChrX	stalkie_big_nohaplotig	exon	86945445	86945526	98	-	.	Parent=comp144779_c0_seq1.mrna1;Target=comp144779_c0_seq1 346 427 -
ChrX	stalkie_big_nohaplotig	CDS	86945150	86945368	.	-	0	Parent=comp144779_c0_seq1.mrna1
ChrX	gffcl	locus	86960737	88459370	.	.	.	ID=RLOC_00004650;geneIDs=FBgn0011584.1.path1,comp135477_c0_seq1.path1,comp157796_c0_seq1.path1;transcripts=comp135477_c0_seq1.mrna1,FBgn0011584.1.mrna1,comp157796_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	86960737	88454524	.	+	.	ID=comp135477_c0_seq1.mrna1;geneID=comp135477_c0_seq1.path1;Name=comp135477_c0_seq1;Dir=antisensecoverage=88.8;identity=97.8;matches=546;mismatches=8;indels=4;unknowns=0;locus=RLOC_00004650
ChrX	stalkie_big_nohaplotig	exon	86960737	86960745	100	+	.	Parent=comp135477_c0_seq1.mrna1;Target=comp135477_c0_seq1 548 556 -
ChrX	stalkie_big_nohaplotig	exon	88451474	88451996	97	+	.	Parent=comp135477_c0_seq1.mrna1;Target=comp135477_c0_seq1 25 547 -
ChrX	stalkie_big_nohaplotig	exon	88454501	88454524	100	+	.	Parent=comp135477_c0_seq1.mrna1;Target=comp135477_c0_seq1 1 24 -
ChrX	stalkie_big_nohaplotig	CDS	86960738	86960745	.	+	0	Parent=comp135477_c0_seq1.mrna1;Target=comp135477_c0_seq1 548 555 .
ChrX	stalkie_big_nohaplotig	CDS	88451474	88451624	.	+	1	Parent=comp135477_c0_seq1.mrna1;Target=comp135477_c0_seq1 397 547 .
ChrX	stalkie_big_nohaplotig	mRNA	88450116	88459370	.	+	.	ID=FBgn0011584.1.mrna1;geneID=FBgn0011584.1.path1;Name=FBgn0011584.1;Dir=sensecoverage=100.0;identity=100.0;matches=1203;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004650
ChrX	stalkie_big_nohaplotig	exon	88450116	88450157	100	+	.	Parent=FBgn0011584.1.mrna1;Target=FBgn0011584.1 1 42 +
ChrX	stalkie_big_nohaplotig	exon	88454501	88455319	100	+	.	Parent=FBgn0011584.1.mrna1;Target=FBgn0011584.1 43 861 +
ChrX	stalkie_big_nohaplotig	exon	88455380	88455636	100	+	.	Parent=FBgn0011584.1.mrna1;Target=FBgn0011584.1 862 1118 +
ChrX	stalkie_big_nohaplotig	exon	88459286	88459370	100	+	.	Parent=FBgn0011584.1.mrna1;Target=FBgn0011584.1 1119 1203 +
ChrX	stalkie_big_nohaplotig	CDS	88450116	88450157	.	+	0	Parent=FBgn0011584.1.mrna1;Target=FBgn0011584.1 1 42 +
ChrX	stalkie_big_nohaplotig	CDS	88454501	88455319	.	+	0	Parent=FBgn0011584.1.mrna1;Target=FBgn0011584.1 43 861 +
ChrX	stalkie_big_nohaplotig	CDS	88455380	88455636	.	+	0	Parent=FBgn0011584.1.mrna1;Target=FBgn0011584.1 862 1118 +
ChrX	stalkie_big_nohaplotig	CDS	88459286	88459370	.	+	1	Parent=FBgn0011584.1.mrna1;Target=FBgn0011584.1 1119 1203 +
ChrX	stalkie_big_nohaplotig	mRNA	88456681	88459307	.	-	.	ID=comp157796_c0_seq1.mrna1;geneID=comp157796_c0_seq1.path1;Name=comp157796_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2625;mismatches=2;indels=0;unknowns=0;Target=comp157796_c0_seq1 2627 1 .;CDS_Target=comp157796_c0_seq1 2242 2045 .;locus=RLOC_00004650
ChrX	stalkie_big_nohaplotig	exon	88456681	88459307	99	-	.	Parent=comp157796_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	88457066	88457263	.	-	0	Parent=comp157796_c0_seq1.mrna1
ChrX	gffcl	locus	87000424	87001437	.	+	.	ID=RLOC_00004651;geneIDs=comp116989_c0_seq1.path1;transcripts=comp116989_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87000424	87001437	.	+	.	ID=comp116989_c0_seq1.mrna1;geneID=comp116989_c0_seq1.path1;Name=comp116989_c0_seq1;Dir=antisensecoverage=99.8;identity=99.6;matches=527;mismatches=2;indels=0;unknowns=0;locus=RLOC_00004651
ChrX	stalkie_big_nohaplotig	exon	87000424	87000555	100	+	.	Parent=comp116989_c0_seq1.mrna1;Target=comp116989_c0_seq1 398 529 -
ChrX	stalkie_big_nohaplotig	exon	87000620	87000687	100	+	.	Parent=comp116989_c0_seq1.mrna1;Target=comp116989_c0_seq1 330 397 -
ChrX	stalkie_big_nohaplotig	exon	87001109	87001437	99	+	.	Parent=comp116989_c0_seq1.mrna1;Target=comp116989_c0_seq1 1 329 -
ChrX	stalkie_big_nohaplotig	CDS	87000498	87000555	.	+	0	Parent=comp116989_c0_seq1.mrna1;Target=comp116989_c0_seq1 398 455 .
ChrX	stalkie_big_nohaplotig	CDS	87000620	87000687	.	+	2	Parent=comp116989_c0_seq1.mrna1;Target=comp116989_c0_seq1 330 397 .
ChrX	stalkie_big_nohaplotig	CDS	87001109	87001336	.	+	0	Parent=comp116989_c0_seq1.mrna1;Target=comp116989_c0_seq1 102 329 .
ChrX	gffcl	locus	87025945	87048153	.	-	.	ID=RLOC_00004652;geneIDs=FBgn0032949.1.path1,comp144664_c0_seq1.path1;transcripts=FBgn0032949.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87027268	87048153	.	-	.	ID=FBgn0032949.1.mrna1;geneID=FBgn0032949.1.path1;Name=FBgn0032949.1;Dir=sensecoverage=100.0;identity=100.0;matches=1038;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004652
ChrX	stalkie_big_nohaplotig	exon	87027268	87027602	100	-	.	Parent=FBgn0032949.1.mrna1;Target=FBgn0032949.1 704 1038 +
ChrX	stalkie_big_nohaplotig	exon	87027667	87027888	100	-	.	Parent=FBgn0032949.1.mrna1;Target=FBgn0032949.1 482 703 +
ChrX	stalkie_big_nohaplotig	exon	87029770	87030138	100	-	.	Parent=FBgn0032949.1.mrna1;Target=FBgn0032949.1 113 481 +
ChrX	stalkie_big_nohaplotig	exon	87048042	87048153	100	-	.	Parent=FBgn0032949.1.mrna1;Target=FBgn0032949.1 1 112 +
ChrX	stalkie_big_nohaplotig	CDS	87027268	87027602	.	-	2	Parent=FBgn0032949.1.mrna1;Target=FBgn0032949.1 704 1038 +
ChrX	stalkie_big_nohaplotig	CDS	87027667	87027888	.	-	2	Parent=FBgn0032949.1.mrna1;Target=FBgn0032949.1 482 703 +
ChrX	stalkie_big_nohaplotig	CDS	87029770	87030138	.	-	2	Parent=FBgn0032949.1.mrna1;Target=FBgn0032949.1 113 481 +
ChrX	stalkie_big_nohaplotig	CDS	87048042	87048153	.	-	0	Parent=FBgn0032949.1.mrna1;Target=FBgn0032949.1 1 112 +
ChrX	gffcl	locus	87041738	87350403	.	-	.	ID=RLOC_00004653;geneIDs=FBgn0014127.1.path1;transcripts=FBgn0014127.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87041738	87350403	.	-	.	ID=FBgn0014127.1.mrna1;geneID=FBgn0014127.1.path1;Name=FBgn0014127.1;Dir=sensecoverage=87.0;identity=99.8;matches=1988;mismatches=3;indels=0;unknowns=0;locus=RLOC_00004653
ChrX	stalkie_big_nohaplotig	exon	87041738	87041745	100	-	.	Parent=FBgn0014127.1.mrna1;Target=FBgn0014127.1 2023 2030 +
ChrX	stalkie_big_nohaplotig	exon	87054776	87054779	100	-	.	Parent=FBgn0014127.1.mrna1;Target=FBgn0014127.1 2019 2022 +
ChrX	stalkie_big_nohaplotig	exon	87059610	87059615	83	-	.	Parent=FBgn0014127.1.mrna1;Target=FBgn0014127.1 2013 2018 +
ChrX	stalkie_big_nohaplotig	exon	87083285	87083294	100	-	.	Parent=FBgn0014127.1.mrna1;Target=FBgn0014127.1 1968 1977 +
ChrX	stalkie_big_nohaplotig	exon	87083309	87083316	100	-	.	Parent=FBgn0014127.1.mrna1;Target=FBgn0014127.1 1955 1962 +
ChrX	stalkie_big_nohaplotig	exon	87346954	87347655	99	-	.	Parent=FBgn0014127.1.mrna1;Target=FBgn0014127.1 1253 1954 +
ChrX	stalkie_big_nohaplotig	exon	87349093	87349975	100	-	.	Parent=FBgn0014127.1.mrna1;Target=FBgn0014127.1 370 1252 +
ChrX	stalkie_big_nohaplotig	exon	87350035	87350403	100	-	.	Parent=FBgn0014127.1.mrna1;Target=FBgn0014127.1 1 369 +
ChrX	stalkie_big_nohaplotig	CDS	87041740	87041745	.	-	1	Parent=FBgn0014127.1.mrna1;Target=FBgn0014127.1 2023 2028 +
ChrX	stalkie_big_nohaplotig	CDS	87054776	87054779	.	-	2	Parent=FBgn0014127.1.mrna1;Target=FBgn0014127.1 2019 2022 +
ChrX	stalkie_big_nohaplotig	CDS	87059610	87059615	.	-	2	Parent=FBgn0014127.1.mrna1;Target=FBgn0014127.1 2013 2018 +
ChrX	stalkie_big_nohaplotig	CDS	87083285	87083294	.	-	0	Parent=FBgn0014127.1.mrna1;Target=FBgn0014127.1 1968 1977 +
ChrX	stalkie_big_nohaplotig	CDS	87083309	87083316	.	-	2	Parent=FBgn0014127.1.mrna1;Target=FBgn0014127.1 1955 1962 +
ChrX	stalkie_big_nohaplotig	CDS	87346954	87347655	.	-	2	Parent=FBgn0014127.1.mrna1;Target=FBgn0014127.1 1253 1954 +
ChrX	stalkie_big_nohaplotig	CDS	87349093	87349975	.	-	0	Parent=FBgn0014127.1.mrna1;Target=FBgn0014127.1 370 1252 +
ChrX	stalkie_big_nohaplotig	CDS	87350035	87350403	.	-	0	Parent=FBgn0014127.1.mrna1;Target=FBgn0014127.1 1 369 +
ChrX	gffcl	locus	87065521	87073885	.	+	.	ID=RLOC_00004654;geneIDs=FBgn0031235.2.path1;transcripts=FBgn0031235.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87065521	87073885	.	+	.	ID=FBgn0031235.2.mrna1;geneID=FBgn0031235.2.path1;Name=FBgn0031235.2;Dir=sensecoverage=100.0;identity=100.0;matches=1482;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004654
ChrX	stalkie_big_nohaplotig	exon	87065521	87066217	100	+	.	Parent=FBgn0031235.2.mrna1;Target=FBgn0031235.2 1 697 +
ChrX	stalkie_big_nohaplotig	exon	87073101	87073885	100	+	.	Parent=FBgn0031235.2.mrna1;Target=FBgn0031235.2 698 1482 +
ChrX	stalkie_big_nohaplotig	CDS	87065521	87066217	.	+	0	Parent=FBgn0031235.2.mrna1;Target=FBgn0031235.2 1 697 +
ChrX	stalkie_big_nohaplotig	CDS	87073101	87073885	.	+	2	Parent=FBgn0031235.2.mrna1;Target=FBgn0031235.2 698 1482 +
ChrX	gffcl	locus	87078934	87079124	.	-	.	ID=RLOC_00004655;geneIDs=comp119470_c0_seq1.path1;transcripts=comp119470_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87078934	87079124	.	-	.	ID=comp119470_c0_seq1.mrna1;geneID=comp119470_c0_seq1.path1;Name=comp119470_c0_seq1;Dir=indeterminatecoverage=91.5;identity=99.0;matches=191;mismatches=0;indels=2;unknowns=0;Target=comp119470_c0_seq1 211 19 .;CDS_Target=comp119470_c0_seq1 206 117 .;locus=RLOC_00004655
ChrX	stalkie_big_nohaplotig	exon	87078934	87079124	98	-	.	Parent=comp119470_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	87078939	87079027	.	-	0	Parent=comp119470_c0_seq1.mrna1
ChrX	gffcl	locus	87080172	87080659	.	+	.	ID=RLOC_00004656;geneIDs=comp145506_c0_seq1.path1;transcripts=comp145506_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87080172	87080659	.	+	.	ID=comp145506_c0_seq1.mrna1;geneID=comp145506_c0_seq1.path1;Name=comp145506_c0_seq1;Dir=indeterminatecoverage=96.4;identity=100.0;matches=488;mismatches=0;indels=0;unknowns=0;Target=comp145506_c0_seq1 489 2 .;CDS_Target=comp145506_c0_seq1 179 102 .;locus=RLOC_00004656
ChrX	stalkie_big_nohaplotig	exon	87080172	87080659	100	+	.	Parent=comp145506_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	87080272	87080349	.	+	0	Parent=comp145506_c0_seq1.mrna1
ChrX	gffcl	locus	87082117	88935204	.	.	.	ID=RLOC_00004657;geneIDs=comp84358_c0_seq1.path1,comp84358_c0_seq1.path2,comp149416_c0_seq1.path1;transcripts=comp84358_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87082722	88935204	.	+	.	ID=comp84358_c0_seq1.mrna1;geneID=comp84358_c0_seq1.path1;Name=comp84358_c0_seq1;Dir=indeterminatecoverage=92.5;identity=91.5;matches=483;mismatches=15;indels=30;unknowns=0;Target=comp84358_c0_seq1 117 1 .;locus=RLOC_00004657
ChrX	stalkie_big_nohaplotig	exon	87082722	87083060	99	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 339 1 .
ChrX	stalkie_big_nohaplotig	exon	88808428	88808430	100	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 379 377 .
ChrX	stalkie_big_nohaplotig	exon	88814253	88814264	91	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 391 380 .
ChrX	stalkie_big_nohaplotig	exon	88824012	88824064	34	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 424 392 .
ChrX	stalkie_big_nohaplotig	exon	88824347	88824355	100	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 433 425 .
ChrX	stalkie_big_nohaplotig	exon	88825761	88825769	100	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 442 434 .
ChrX	stalkie_big_nohaplotig	exon	88826830	88826833	100	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 446 443 .
ChrX	stalkie_big_nohaplotig	exon	88831353	88831354	100	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 448 447 .
ChrX	stalkie_big_nohaplotig	exon	88832474	88832476	100	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 451 449 .
ChrX	stalkie_big_nohaplotig	exon	88833347	88833358	83	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 463 452 .
ChrX	stalkie_big_nohaplotig	exon	88847677	88847679	100	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 466 464 .
ChrX	stalkie_big_nohaplotig	exon	88860059	88860061	100	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 469 467 .
ChrX	stalkie_big_nohaplotig	exon	88865973	88865982	100	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 479 470 .
ChrX	stalkie_big_nohaplotig	exon	88868635	88868636	100	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 481 480 .
ChrX	stalkie_big_nohaplotig	exon	88875298	88875304	100	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 488 482 .
ChrX	stalkie_big_nohaplotig	exon	88877951	88877957	100	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 495 489 .
ChrX	stalkie_big_nohaplotig	exon	88877971	88877975	100	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 553 549 .
ChrX	stalkie_big_nohaplotig	exon	88882796	88882801	100	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 559 554 .
ChrX	stalkie_big_nohaplotig	exon	88887564	88887569	50	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 565 560 .
ChrX	stalkie_big_nohaplotig	exon	88891383	88891386	100	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 569 566 .
ChrX	stalkie_big_nohaplotig	exon	88892121	88892125	100	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 574 570 .
ChrX	stalkie_big_nohaplotig	exon	88897911	88897912	100	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 576 575 .
ChrX	stalkie_big_nohaplotig	exon	88905798	88905801	100	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 580 577 .
ChrX	stalkie_big_nohaplotig	exon	88921429	88921430	100	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 582 581 .
ChrX	stalkie_big_nohaplotig	exon	88935195	88935204	100	+	.	Parent=comp84358_c0_seq1.mrna1;Target=comp84358_c0_seq1 592 583 .
ChrX	stalkie_big_nohaplotig	CDS	87082722	87082838	.	+	0	Parent=comp84358_c0_seq1.mrna1
ChrX	gffcl	locus	87115332	87115991	.	+	.	ID=RLOC_00004659;geneIDs=FBgn0030722.5.path1;transcripts=FBgn0030722.5.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87115332	87115991	.	+	.	ID=FBgn0030722.5.mrna1;geneID=FBgn0030722.5.path1;Name=FBgn0030722.5;Dir=indeterminatecoverage=100.0;identity=99.1;matches=654;mismatches=6;indels=0;unknowns=0;Target=FBgn0030722.5 660 1 .;locus=RLOC_00004659
ChrX	stalkie_big_nohaplotig	exon	87115332	87115991	99	+	.	Parent=FBgn0030722.5.mrna1
ChrX	stalkie_big_nohaplotig	CDS	87115332	87115991	.	+	0	Parent=FBgn0030722.5.mrna1
ChrX	gffcl	locus	87136490	87142529	.	-	.	ID=RLOC_00004660;geneIDs=comp137432_c0_seq1.path1;transcripts=comp137432_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87136490	87142529	.	-	.	ID=comp137432_c0_seq1.mrna1;geneID=comp137432_c0_seq1.path1;Name=comp137432_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=336;mismatches=0;indels=0;unknowns=0;Target=comp137432_c0_seq1 2 94 +;locus=RLOC_00004660
ChrX	stalkie_big_nohaplotig	exon	87136490	87136653	100	-	.	Parent=comp137432_c0_seq1.mrna1;Target=comp137432_c0_seq1 173 336 +
ChrX	stalkie_big_nohaplotig	exon	87142358	87142529	100	-	.	Parent=comp137432_c0_seq1.mrna1;Target=comp137432_c0_seq1 1 172 +
ChrX	stalkie_big_nohaplotig	CDS	87142436	87142528	.	-	0	Parent=comp137432_c0_seq1.mrna1
ChrX	gffcl	locus	87160028	87161439	.	-	.	ID=RLOC_00004661;geneIDs=comp145175_c0_seq1.path1;transcripts=comp145175_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87160028	87161439	.	-	.	ID=comp145175_c0_seq1.mrna1;geneID=comp145175_c0_seq1.path1;Name=comp145175_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=1412;mismatches=0;indels=0;unknowns=0;Target=comp145175_c0_seq1 1412 1 .;CDS_Target=comp145175_c0_seq1 649 428 .;locus=RLOC_00004661
ChrX	stalkie_big_nohaplotig	exon	87160028	87161439	100	-	.	Parent=comp145175_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	87160791	87161012	.	-	0	Parent=comp145175_c0_seq1.mrna1
ChrX	gffcl	locus	87163194	87169126	.	-	.	ID=RLOC_00004662;geneIDs=ORF582.path1,comp160719_c0_seq1.path1;transcripts=comp160719_c0_seq1.mrna1,ORF582.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87163194	87169126	.	-	.	ID=comp160719_c0_seq1.mrna1;geneID=comp160719_c0_seq1.path1;Name=comp160719_c0_seq1;Dir=antisensecoverage=99.9;identity=99.9;matches=1831;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004662
ChrX	stalkie_big_nohaplotig	exon	87163194	87163224	100	-	.	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 1 31 -
ChrX	stalkie_big_nohaplotig	exon	87163288	87163344	100	-	.	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 32 88 -
ChrX	stalkie_big_nohaplotig	exon	87163540	87163599	100	-	.	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 89 148 -
ChrX	stalkie_big_nohaplotig	exon	87163660	87163740	100	-	.	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 149 229 -
ChrX	stalkie_big_nohaplotig	exon	87163793	87163876	100	-	.	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 230 313 -
ChrX	stalkie_big_nohaplotig	exon	87163942	87164166	100	-	.	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 314 538 -
ChrX	stalkie_big_nohaplotig	exon	87164232	87164312	100	-	.	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 539 619 -
ChrX	stalkie_big_nohaplotig	exon	87164373	87164453	100	-	.	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 620 700 -
ChrX	stalkie_big_nohaplotig	exon	87164530	87164619	100	-	.	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 701 790 -
ChrX	stalkie_big_nohaplotig	exon	87164678	87164770	100	-	.	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 791 883 -
ChrX	stalkie_big_nohaplotig	exon	87164827	87164892	100	-	.	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 884 949 -
ChrX	stalkie_big_nohaplotig	exon	87165729	87165815	100	-	.	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 950 1036 -
ChrX	stalkie_big_nohaplotig	exon	87165881	87165955	100	-	.	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 1037 1111 -
ChrX	stalkie_big_nohaplotig	exon	87166868	87166945	100	-	.	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 1112 1189 -
ChrX	stalkie_big_nohaplotig	exon	87167004	87167093	100	-	.	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 1190 1279 -
ChrX	stalkie_big_nohaplotig	exon	87167150	87167212	98	-	.	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 1280 1342 -
ChrX	stalkie_big_nohaplotig	exon	87167892	87168269	100	-	.	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 1343 1720 -
ChrX	stalkie_big_nohaplotig	exon	87169015	87169126	100	-	.	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 1721 1832 -
ChrX	stalkie_big_nohaplotig	CDS	87164077	87164166	.	-	0	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 449 538 .
ChrX	stalkie_big_nohaplotig	CDS	87164232	87164312	.	-	0	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 539 619 .
ChrX	stalkie_big_nohaplotig	CDS	87164373	87164453	.	-	0	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 620 700 .
ChrX	stalkie_big_nohaplotig	CDS	87164530	87164619	.	-	0	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 701 790 .
ChrX	stalkie_big_nohaplotig	CDS	87164678	87164770	.	-	0	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 791 883 .
ChrX	stalkie_big_nohaplotig	CDS	87164827	87164892	.	-	0	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 884 949 .
ChrX	stalkie_big_nohaplotig	CDS	87165729	87165815	.	-	0	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 950 1036 .
ChrX	stalkie_big_nohaplotig	CDS	87165881	87165955	.	-	0	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 1037 1111 .
ChrX	stalkie_big_nohaplotig	CDS	87166868	87166945	.	-	0	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 1112 1189 .
ChrX	stalkie_big_nohaplotig	CDS	87167004	87167093	.	-	0	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 1190 1279 .
ChrX	stalkie_big_nohaplotig	CDS	87167150	87167212	.	-	0	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 1280 1342 .
ChrX	stalkie_big_nohaplotig	CDS	87167892	87168218	.	-	0	Parent=comp160719_c0_seq1.mrna1;Target=comp160719_c0_seq1 1343 1669 .
ChrX	stalkie_big_nohaplotig	mRNA	87163195	87168239	.	-	.	ID=ORF582.mrna1;geneID=ORF582.path1;Name=ORF582;Dir=sensecoverage=100.0;identity=99.9;matches=1637;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004662
ChrX	stalkie_big_nohaplotig	exon	87163195	87163224	100	-	.	Parent=ORF582.mrna1;Target=ORF582 1609 1638 +
ChrX	stalkie_big_nohaplotig	exon	87163288	87163344	100	-	.	Parent=ORF582.mrna1;Target=ORF582 1552 1608 +
ChrX	stalkie_big_nohaplotig	exon	87163540	87163599	100	-	.	Parent=ORF582.mrna1;Target=ORF582 1492 1551 +
ChrX	stalkie_big_nohaplotig	exon	87163660	87163740	100	-	.	Parent=ORF582.mrna1;Target=ORF582 1411 1491 +
ChrX	stalkie_big_nohaplotig	exon	87163793	87163876	100	-	.	Parent=ORF582.mrna1;Target=ORF582 1327 1410 +
ChrX	stalkie_big_nohaplotig	exon	87163942	87164031	100	-	.	Parent=ORF582.mrna1;Target=ORF582 1237 1326 +
ChrX	stalkie_big_nohaplotig	exon	87164083	87164166	100	-	.	Parent=ORF582.mrna1;Target=ORF582 1153 1236 +
ChrX	stalkie_big_nohaplotig	exon	87164232	87164312	100	-	.	Parent=ORF582.mrna1;Target=ORF582 1072 1152 +
ChrX	stalkie_big_nohaplotig	exon	87164373	87164453	100	-	.	Parent=ORF582.mrna1;Target=ORF582 991 1071 +
ChrX	stalkie_big_nohaplotig	exon	87164530	87164619	100	-	.	Parent=ORF582.mrna1;Target=ORF582 901 990 +
ChrX	stalkie_big_nohaplotig	exon	87164678	87164770	100	-	.	Parent=ORF582.mrna1;Target=ORF582 808 900 +
ChrX	stalkie_big_nohaplotig	exon	87164827	87164892	100	-	.	Parent=ORF582.mrna1;Target=ORF582 742 807 +
ChrX	stalkie_big_nohaplotig	exon	87165729	87165815	100	-	.	Parent=ORF582.mrna1;Target=ORF582 655 741 +
ChrX	stalkie_big_nohaplotig	exon	87165881	87165955	100	-	.	Parent=ORF582.mrna1;Target=ORF582 580 654 +
ChrX	stalkie_big_nohaplotig	exon	87166868	87166945	100	-	.	Parent=ORF582.mrna1;Target=ORF582 502 579 +
ChrX	stalkie_big_nohaplotig	exon	87167004	87167093	100	-	.	Parent=ORF582.mrna1;Target=ORF582 412 501 +
ChrX	stalkie_big_nohaplotig	exon	87167150	87167212	98	-	.	Parent=ORF582.mrna1;Target=ORF582 349 411 +
ChrX	stalkie_big_nohaplotig	exon	87167892	87168239	100	-	.	Parent=ORF582.mrna1;Target=ORF582 1 348 +
ChrX	stalkie_big_nohaplotig	CDS	87163195	87163224	.	-	0	Parent=ORF582.mrna1;Target=ORF582 1609 1638 +
ChrX	stalkie_big_nohaplotig	CDS	87163288	87163344	.	-	0	Parent=ORF582.mrna1;Target=ORF582 1552 1608 +
ChrX	stalkie_big_nohaplotig	CDS	87163540	87163599	.	-	0	Parent=ORF582.mrna1;Target=ORF582 1492 1551 +
ChrX	stalkie_big_nohaplotig	CDS	87163660	87163740	.	-	0	Parent=ORF582.mrna1;Target=ORF582 1411 1491 +
ChrX	stalkie_big_nohaplotig	CDS	87163793	87163876	.	-	0	Parent=ORF582.mrna1;Target=ORF582 1327 1410 +
ChrX	stalkie_big_nohaplotig	CDS	87163942	87164031	.	-	0	Parent=ORF582.mrna1;Target=ORF582 1237 1326 +
ChrX	stalkie_big_nohaplotig	CDS	87164083	87164166	.	-	0	Parent=ORF582.mrna1;Target=ORF582 1153 1236 +
ChrX	stalkie_big_nohaplotig	CDS	87164232	87164312	.	-	0	Parent=ORF582.mrna1;Target=ORF582 1072 1152 +
ChrX	stalkie_big_nohaplotig	CDS	87164373	87164453	.	-	0	Parent=ORF582.mrna1;Target=ORF582 991 1071 +
ChrX	stalkie_big_nohaplotig	CDS	87164530	87164619	.	-	0	Parent=ORF582.mrna1;Target=ORF582 901 990 +
ChrX	stalkie_big_nohaplotig	CDS	87164678	87164770	.	-	0	Parent=ORF582.mrna1;Target=ORF582 808 900 +
ChrX	stalkie_big_nohaplotig	CDS	87164827	87164892	.	-	0	Parent=ORF582.mrna1;Target=ORF582 742 807 +
ChrX	stalkie_big_nohaplotig	CDS	87165729	87165815	.	-	0	Parent=ORF582.mrna1;Target=ORF582 655 741 +
ChrX	stalkie_big_nohaplotig	CDS	87165881	87165955	.	-	0	Parent=ORF582.mrna1;Target=ORF582 580 654 +
ChrX	stalkie_big_nohaplotig	CDS	87166868	87166945	.	-	0	Parent=ORF582.mrna1;Target=ORF582 502 579 +
ChrX	stalkie_big_nohaplotig	CDS	87167004	87167093	.	-	0	Parent=ORF582.mrna1;Target=ORF582 412 501 +
ChrX	stalkie_big_nohaplotig	CDS	87167150	87167212	.	-	0	Parent=ORF582.mrna1;Target=ORF582 349 411 +
ChrX	stalkie_big_nohaplotig	CDS	87167892	87168239	.	-	0	Parent=ORF582.mrna1;Target=ORF582 1 348 +
ChrX	gffcl	locus	87210267	87221714	.	-	.	ID=RLOC_00004665;geneIDs=FBgn0032945.1.path1;transcripts=FBgn0032945.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87210267	87221714	.	-	.	ID=FBgn0032945.1.mrna1;geneID=FBgn0032945.1.path1;Name=FBgn0032945.1;Dir=sensecoverage=100.0;identity=100.0;matches=2754;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004665
ChrX	stalkie_big_nohaplotig	exon	87210267	87210893	100	-	.	Parent=FBgn0032945.1.mrna1;Target=FBgn0032945.1 2128 2754 +
ChrX	stalkie_big_nohaplotig	exon	87211105	87211492	100	-	.	Parent=FBgn0032945.1.mrna1;Target=FBgn0032945.1 1740 2127 +
ChrX	stalkie_big_nohaplotig	exon	87211555	87213266	100	-	.	Parent=FBgn0032945.1.mrna1;Target=FBgn0032945.1 28 1739 +
ChrX	stalkie_big_nohaplotig	exon	87221688	87221714	100	-	.	Parent=FBgn0032945.1.mrna1;Target=FBgn0032945.1 1 27 +
ChrX	stalkie_big_nohaplotig	CDS	87210267	87210893	.	-	0	Parent=FBgn0032945.1.mrna1;Target=FBgn0032945.1 2128 2754 +
ChrX	stalkie_big_nohaplotig	CDS	87211105	87211492	.	-	1	Parent=FBgn0032945.1.mrna1;Target=FBgn0032945.1 1740 2127 +
ChrX	stalkie_big_nohaplotig	CDS	87211555	87213266	.	-	0	Parent=FBgn0032945.1.mrna1;Target=FBgn0032945.1 28 1739 +
ChrX	stalkie_big_nohaplotig	CDS	87221688	87221714	.	-	0	Parent=FBgn0032945.1.mrna1;Target=FBgn0032945.1 1 27 +
ChrX	gffcl	locus	87246474	87252159	.	-	.	ID=RLOC_00004666;geneIDs=FBgn0023090.2.path1;transcripts=FBgn0023090.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87246474	87252159	.	-	.	ID=FBgn0023090.2.mrna1;geneID=FBgn0023090.2.path1;Name=FBgn0023090.2;Dir=sensecoverage=100.0;identity=99.6;matches=3397;mismatches=13;indels=0;unknowns=0;locus=RLOC_00004666
ChrX	stalkie_big_nohaplotig	exon	87246474	87249037	99	-	.	Parent=FBgn0023090.2.mrna1;Target=FBgn0023090.2 848 3411 +
ChrX	stalkie_big_nohaplotig	exon	87249321	87249380	100	-	.	Parent=FBgn0023090.2.mrna1;Target=FBgn0023090.2 788 847 +
ChrX	stalkie_big_nohaplotig	exon	87250542	87250630	100	-	.	Parent=FBgn0023090.2.mrna1;Target=FBgn0023090.2 699 787 +
ChrX	stalkie_big_nohaplotig	exon	87251278	87251342	100	-	.	Parent=FBgn0023090.2.mrna1;Target=FBgn0023090.2 634 698 +
ChrX	stalkie_big_nohaplotig	exon	87251414	87251512	100	-	.	Parent=FBgn0023090.2.mrna1;Target=FBgn0023090.2 535 633 +
ChrX	stalkie_big_nohaplotig	exon	87251576	87251946	99	-	.	Parent=FBgn0023090.2.mrna1;Target=FBgn0023090.2 164 534 +
ChrX	stalkie_big_nohaplotig	exon	87251998	87252159	100	-	.	Parent=FBgn0023090.2.mrna1;Target=FBgn0023090.2 2 163 +
ChrX	stalkie_big_nohaplotig	CDS	87246474	87249037	.	-	2	Parent=FBgn0023090.2.mrna1;Target=FBgn0023090.2 848 3411 +
ChrX	stalkie_big_nohaplotig	CDS	87249321	87249380	.	-	2	Parent=FBgn0023090.2.mrna1;Target=FBgn0023090.2 788 847 +
ChrX	stalkie_big_nohaplotig	CDS	87250542	87250630	.	-	1	Parent=FBgn0023090.2.mrna1;Target=FBgn0023090.2 699 787 +
ChrX	stalkie_big_nohaplotig	CDS	87251278	87251342	.	-	0	Parent=FBgn0023090.2.mrna1;Target=FBgn0023090.2 634 698 +
ChrX	stalkie_big_nohaplotig	CDS	87251414	87251512	.	-	0	Parent=FBgn0023090.2.mrna1;Target=FBgn0023090.2 535 633 +
ChrX	stalkie_big_nohaplotig	CDS	87251576	87251946	.	-	2	Parent=FBgn0023090.2.mrna1;Target=FBgn0023090.2 164 534 +
ChrX	stalkie_big_nohaplotig	CDS	87251998	87252157	.	-	0	Parent=FBgn0023090.2.mrna1;Target=FBgn0023090.2 4 163 +
ChrX	gffcl	locus	87268386	87276124	.	-	.	ID=RLOC_00004667;geneIDs=FBgn0023090.1.path1;transcripts=FBgn0023090.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87268386	87276124	.	-	.	ID=FBgn0023090.1.mrna1;geneID=FBgn0023090.1.path1;Name=FBgn0023090.1;Dir=sensecoverage=100.0;identity=99.5;matches=4805;mismatches=22;indels=0;unknowns=0;locus=RLOC_00004667
ChrX	stalkie_big_nohaplotig	exon	87268386	87272383	99	-	.	Parent=FBgn0023090.1.mrna1;Target=FBgn0023090.1 830 4827 +
ChrX	stalkie_big_nohaplotig	exon	87272439	87272524	100	-	.	Parent=FBgn0023090.1.mrna1;Target=FBgn0023090.1 744 829 +
ChrX	stalkie_big_nohaplotig	exon	87274198	87274262	100	-	.	Parent=FBgn0023090.1.mrna1;Target=FBgn0023090.1 679 743 +
ChrX	stalkie_big_nohaplotig	exon	87274320	87274418	100	-	.	Parent=FBgn0023090.1.mrna1;Target=FBgn0023090.1 580 678 +
ChrX	stalkie_big_nohaplotig	exon	87275479	87275849	99	-	.	Parent=FBgn0023090.1.mrna1;Target=FBgn0023090.1 209 579 +
ChrX	stalkie_big_nohaplotig	exon	87275917	87276124	100	-	.	Parent=FBgn0023090.1.mrna1;Target=FBgn0023090.1 1 208 +
ChrX	stalkie_big_nohaplotig	CDS	87268386	87272383	.	-	2	Parent=FBgn0023090.1.mrna1;Target=FBgn0023090.1 830 4827 +
ChrX	stalkie_big_nohaplotig	CDS	87272439	87272524	.	-	1	Parent=FBgn0023090.1.mrna1;Target=FBgn0023090.1 744 829 +
ChrX	stalkie_big_nohaplotig	CDS	87274198	87274262	.	-	0	Parent=FBgn0023090.1.mrna1;Target=FBgn0023090.1 679 743 +
ChrX	stalkie_big_nohaplotig	CDS	87274320	87274418	.	-	0	Parent=FBgn0023090.1.mrna1;Target=FBgn0023090.1 580 678 +
ChrX	stalkie_big_nohaplotig	CDS	87275479	87275849	.	-	2	Parent=FBgn0023090.1.mrna1;Target=FBgn0023090.1 209 579 +
ChrX	stalkie_big_nohaplotig	CDS	87275917	87276124	.	-	0	Parent=FBgn0023090.1.mrna1;Target=FBgn0023090.1 1 208 +
ChrX	gffcl	locus	87279354	87285696	.	-	.	ID=RLOC_00004668;geneIDs=FBgn0023090.3.path1;transcripts=FBgn0023090.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87279354	87285696	.	-	.	ID=FBgn0023090.3.mrna1;geneID=FBgn0023090.3.path1;Name=FBgn0023090.3;Dir=sensecoverage=100.0;identity=99.8;matches=4561;mismatches=11;indels=0;unknowns=0;locus=RLOC_00004668
ChrX	stalkie_big_nohaplotig	exon	87279354	87283108	99	-	.	Parent=FBgn0023090.3.mrna1;Target=FBgn0023090.3 818 4572 +
ChrX	stalkie_big_nohaplotig	exon	87283163	87283248	100	-	.	Parent=FBgn0023090.3.mrna1;Target=FBgn0023090.3 732 817 +
ChrX	stalkie_big_nohaplotig	exon	87283556	87283620	100	-	.	Parent=FBgn0023090.3.mrna1;Target=FBgn0023090.3 667 731 +
ChrX	stalkie_big_nohaplotig	exon	87283678	87283776	100	-	.	Parent=FBgn0023090.3.mrna1;Target=FBgn0023090.3 568 666 +
ChrX	stalkie_big_nohaplotig	exon	87284023	87284393	99	-	.	Parent=FBgn0023090.3.mrna1;Target=FBgn0023090.3 197 567 +
ChrX	stalkie_big_nohaplotig	exon	87284448	87284611	100	-	.	Parent=FBgn0023090.3.mrna1;Target=FBgn0023090.3 33 196 +
ChrX	stalkie_big_nohaplotig	exon	87285665	87285696	100	-	.	Parent=FBgn0023090.3.mrna1;Target=FBgn0023090.3 1 32 +
ChrX	stalkie_big_nohaplotig	CDS	87279354	87283108	.	-	2	Parent=FBgn0023090.3.mrna1;Target=FBgn0023090.3 818 4572 +
ChrX	stalkie_big_nohaplotig	CDS	87283163	87283248	.	-	1	Parent=FBgn0023090.3.mrna1;Target=FBgn0023090.3 732 817 +
ChrX	stalkie_big_nohaplotig	CDS	87283556	87283620	.	-	0	Parent=FBgn0023090.3.mrna1;Target=FBgn0023090.3 667 731 +
ChrX	stalkie_big_nohaplotig	CDS	87283678	87283776	.	-	0	Parent=FBgn0023090.3.mrna1;Target=FBgn0023090.3 568 666 +
ChrX	stalkie_big_nohaplotig	CDS	87284023	87284393	.	-	2	Parent=FBgn0023090.3.mrna1;Target=FBgn0023090.3 197 567 +
ChrX	stalkie_big_nohaplotig	CDS	87284448	87284611	.	-	1	Parent=FBgn0023090.3.mrna1;Target=FBgn0023090.3 33 196 +
ChrX	stalkie_big_nohaplotig	CDS	87285665	87285696	.	-	0	Parent=FBgn0023090.3.mrna1;Target=FBgn0023090.3 1 32 +
ChrX	gffcl	locus	87292829	87311046	.	+	.	ID=RLOC_00004669;geneIDs=FBgn0031752.1.path1;transcripts=FBgn0031752.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87292829	87311046	.	+	.	ID=FBgn0031752.1.mrna1;geneID=FBgn0031752.1.path1;Name=FBgn0031752.1;Dir=sensecoverage=99.9;identity=99.4;matches=3970;mismatches=0;indels=24;unknowns=0;locus=RLOC_00004669
ChrX	stalkie_big_nohaplotig	exon	87292829	87292940	100	+	.	Parent=FBgn0031752.1.mrna1;Target=FBgn0031752.1 1 112 +
ChrX	stalkie_big_nohaplotig	exon	87296527	87297825	100	+	.	Parent=FBgn0031752.1.mrna1;Target=FBgn0031752.1 113 1411 +
ChrX	stalkie_big_nohaplotig	exon	87298227	87298637	100	+	.	Parent=FBgn0031752.1.mrna1;Target=FBgn0031752.1 1412 1822 +
ChrX	stalkie_big_nohaplotig	exon	87298697	87298814	100	+	.	Parent=FBgn0031752.1.mrna1;Target=FBgn0031752.1 1823 1940 +
ChrX	stalkie_big_nohaplotig	exon	87300897	87301032	100	+	.	Parent=FBgn0031752.1.mrna1;Target=FBgn0031752.1 1941 2076 +
ChrX	stalkie_big_nohaplotig	exon	87301983	87302115	100	+	.	Parent=FBgn0031752.1.mrna1;Target=FBgn0031752.1 2077 2209 +
ChrX	stalkie_big_nohaplotig	exon	87302184	87302375	100	+	.	Parent=FBgn0031752.1.mrna1;Target=FBgn0031752.1 2210 2401 +
ChrX	stalkie_big_nohaplotig	exon	87306615	87306683	100	+	.	Parent=FBgn0031752.1.mrna1;Target=FBgn0031752.1 2402 2470 +
ChrX	stalkie_big_nohaplotig	exon	87306943	87307617	96	+	.	Parent=FBgn0031752.1.mrna1;Target=FBgn0031752.1 2471 3169 +
ChrX	stalkie_big_nohaplotig	exon	87310152	87310649	100	+	.	Parent=FBgn0031752.1.mrna1;Target=FBgn0031752.1 3170 3667 +
ChrX	stalkie_big_nohaplotig	exon	87310720	87311046	100	+	.	Parent=FBgn0031752.1.mrna1;Target=FBgn0031752.1 3668 3994 +
ChrX	stalkie_big_nohaplotig	CDS	87292829	87292940	.	+	0	Parent=FBgn0031752.1.mrna1;Target=FBgn0031752.1 1 112 +
ChrX	stalkie_big_nohaplotig	CDS	87296527	87297825	.	+	2	Parent=FBgn0031752.1.mrna1;Target=FBgn0031752.1 113 1411 +
ChrX	stalkie_big_nohaplotig	CDS	87298227	87298637	.	+	2	Parent=FBgn0031752.1.mrna1;Target=FBgn0031752.1 1412 1822 +
ChrX	stalkie_big_nohaplotig	CDS	87298697	87298814	.	+	2	Parent=FBgn0031752.1.mrna1;Target=FBgn0031752.1 1823 1940 +
ChrX	stalkie_big_nohaplotig	CDS	87300897	87301032	.	+	1	Parent=FBgn0031752.1.mrna1;Target=FBgn0031752.1 1941 2076 +
ChrX	stalkie_big_nohaplotig	CDS	87301983	87302115	.	+	0	Parent=FBgn0031752.1.mrna1;Target=FBgn0031752.1 2077 2209 +
ChrX	stalkie_big_nohaplotig	CDS	87302184	87302375	.	+	2	Parent=FBgn0031752.1.mrna1;Target=FBgn0031752.1 2210 2401 +
ChrX	stalkie_big_nohaplotig	CDS	87306615	87306683	.	+	2	Parent=FBgn0031752.1.mrna1;Target=FBgn0031752.1 2402 2470 +
ChrX	stalkie_big_nohaplotig	CDS	87306943	87307617	.	+	2	Parent=FBgn0031752.1.mrna1;Target=FBgn0031752.1 2471 3169 +
ChrX	stalkie_big_nohaplotig	CDS	87310152	87310649	.	+	2	Parent=FBgn0031752.1.mrna1;Target=FBgn0031752.1 3170 3667 +
ChrX	stalkie_big_nohaplotig	CDS	87310720	87311045	.	+	2	Parent=FBgn0031752.1.mrna1;Target=FBgn0031752.1 3668 3993 +
ChrX	gffcl	locus	87312137	87316109	.	-	.	ID=RLOC_00004670;geneIDs=FBgn0031753.1.path1,comp1108725_c0_seq1.path1;transcripts=FBgn0031753.1.mrna1,comp1108725_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87312137	87316109	.	-	.	ID=FBgn0031753.1.mrna1;geneID=FBgn0031753.1.path1;Name=FBgn0031753.1;Dir=sensecoverage=100.0;identity=100.0;matches=513;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004670
ChrX	stalkie_big_nohaplotig	exon	87312137	87312243	100	-	.	Parent=FBgn0031753.1.mrna1;Target=FBgn0031753.1 407 513 +
ChrX	stalkie_big_nohaplotig	exon	87315576	87315747	100	-	.	Parent=FBgn0031753.1.mrna1;Target=FBgn0031753.1 235 406 +
ChrX	stalkie_big_nohaplotig	exon	87315808	87315880	100	-	.	Parent=FBgn0031753.1.mrna1;Target=FBgn0031753.1 162 234 +
ChrX	stalkie_big_nohaplotig	exon	87315949	87316109	100	-	.	Parent=FBgn0031753.1.mrna1;Target=FBgn0031753.1 1 161 +
ChrX	stalkie_big_nohaplotig	CDS	87312137	87312243	.	-	2	Parent=FBgn0031753.1.mrna1;Target=FBgn0031753.1 407 513 +
ChrX	stalkie_big_nohaplotig	CDS	87315576	87315747	.	-	0	Parent=FBgn0031753.1.mrna1;Target=FBgn0031753.1 235 406 +
ChrX	stalkie_big_nohaplotig	CDS	87315808	87315880	.	-	1	Parent=FBgn0031753.1.mrna1;Target=FBgn0031753.1 162 234 +
ChrX	stalkie_big_nohaplotig	CDS	87315949	87316109	.	-	0	Parent=FBgn0031753.1.mrna1;Target=FBgn0031753.1 1 161 +
ChrX	stalkie_big_nohaplotig	mRNA	87312225	87312665	.	-	.	ID=comp1108725_c0_seq1.mrna1;geneID=comp1108725_c0_seq1.path1;Name=comp1108725_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=441;mismatches=0;indels=0;unknowns=0;Target=comp1108725_c0_seq1 441 1 .;CDS_Target=comp1108725_c0_seq1 342 253 .;locus=RLOC_00004670
ChrX	stalkie_big_nohaplotig	exon	87312225	87312665	100	-	.	Parent=comp1108725_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	87312324	87312413	.	-	0	Parent=comp1108725_c0_seq1.mrna1
ChrX	gffcl	locus	87320282	87321101	.	+	.	ID=RLOC_00004671;geneIDs=FBgn0032518.1.path1;transcripts=FBgn0032518.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87320282	87321101	.	+	.	ID=FBgn0032518.1.mrna1;geneID=FBgn0032518.1.path1;Name=FBgn0032518.1;Dir=sensecoverage=100.0;identity=100.0;matches=585;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004671
ChrX	stalkie_big_nohaplotig	exon	87320282	87320403	100	+	.	Parent=FBgn0032518.1.mrna1;Target=FBgn0032518.1 1 122 +
ChrX	stalkie_big_nohaplotig	exon	87320575	87320650	100	+	.	Parent=FBgn0032518.1.mrna1;Target=FBgn0032518.1 123 198 +
ChrX	stalkie_big_nohaplotig	exon	87320715	87321101	100	+	.	Parent=FBgn0032518.1.mrna1;Target=FBgn0032518.1 199 585 +
ChrX	stalkie_big_nohaplotig	CDS	87320282	87320403	.	+	0	Parent=FBgn0032518.1.mrna1;Target=FBgn0032518.1 1 122 +
ChrX	stalkie_big_nohaplotig	CDS	87320575	87320650	.	+	1	Parent=FBgn0032518.1.mrna1;Target=FBgn0032518.1 123 198 +
ChrX	stalkie_big_nohaplotig	CDS	87320715	87321101	.	+	0	Parent=FBgn0032518.1.mrna1;Target=FBgn0032518.1 199 585 +
ChrX	stalkie_big_nohaplotig	mRNA	87337304	87996955	.	-	.	ID=ORF984.mrna1;geneID=ORF984.path1;Name=ORF984;Dir=sensecoverage=95.2;identity=89.2;matches=1044;mismatches=85;indels=42;unknowns=0;locus=RLOC_00004673
ChrX	stalkie_big_nohaplotig	exon	87337304	87337316	100	-	.	Parent=ORF984.mrna1;Target=ORF984 1225 1237 +
ChrX	stalkie_big_nohaplotig	exon	87341495	87341496	100	-	.	Parent=ORF984.mrna1;Target=ORF984 1223 1224 +
ChrX	stalkie_big_nohaplotig	exon	87347877	87347878	100	-	.	Parent=ORF984.mrna1;Target=ORF984 1221 1222 +
ChrX	stalkie_big_nohaplotig	exon	87352172	87352175	100	-	.	Parent=ORF984.mrna1;Target=ORF984 1217 1220 +
ChrX	stalkie_big_nohaplotig	exon	87356166	87356170	100	-	.	Parent=ORF984.mrna1;Target=ORF984 1212 1216 +
ChrX	stalkie_big_nohaplotig	exon	87990719	87990737	56	-	.	Parent=ORF984.mrna1;Target=ORF984 1190 1210 +
ChrX	stalkie_big_nohaplotig	exon	87992323	87992330	100	-	.	Parent=ORF984.mrna1;Target=ORF984 1178 1185 +
ChrX	stalkie_big_nohaplotig	exon	87992459	87992828	84	-	.	Parent=ORF984.mrna1;Target=ORF984 709 1114 +
ChrX	stalkie_big_nohaplotig	exon	87996248	87996955	92	-	.	Parent=ORF984.mrna1;Target=ORF984 1 708 +
ChrX	stalkie_big_nohaplotig	CDS	87337305	87337316	.	-	1	Parent=ORF984.mrna1;Target=ORF984 1225 1236 +
ChrX	stalkie_big_nohaplotig	CDS	87341495	87341496	.	-	0	Parent=ORF984.mrna1;Target=ORF984 1223 1224 +
ChrX	stalkie_big_nohaplotig	CDS	87347877	87347878	.	-	2	Parent=ORF984.mrna1;Target=ORF984 1221 1222 +
ChrX	stalkie_big_nohaplotig	CDS	87352172	87352175	.	-	0	Parent=ORF984.mrna1;Target=ORF984 1217 1220 +
ChrX	stalkie_big_nohaplotig	CDS	87356166	87356170	.	-	2	Parent=ORF984.mrna1;Target=ORF984 1212 1216 +
ChrX	stalkie_big_nohaplotig	CDS	87990719	87990737	.	-	0	Parent=ORF984.mrna1;Target=ORF984 1190 1210 +
ChrX	stalkie_big_nohaplotig	CDS	87992323	87992330	.	-	2	Parent=ORF984.mrna1;Target=ORF984 1178 1185 +
ChrX	stalkie_big_nohaplotig	CDS	87992459	87992828	.	-	0	Parent=ORF984.mrna1;Target=ORF984 709 1114 +
ChrX	stalkie_big_nohaplotig	CDS	87996248	87996955	.	-	0	Parent=ORF984.mrna1;Target=ORF984 1 708 +
ChrX	stalkie_big_nohaplotig	mRNA	87754583	89512248	.	-	.	ID=comp155963_c0_seq1.mrna1;geneID=comp155963_c0_seq1.path1;Name=comp155963_c0_seq1;Dir=sensecoverage=72.8;identity=95.7;matches=2847;mismatches=81;indels=46;unknowns=0;Target=comp155963_c0_seq1 1235 1414 +;locus=RLOC_00004673
ChrX	stalkie_big_nohaplotig	exon	87754583	87754592	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 3262 3271 +
ChrX	stalkie_big_nohaplotig	exon	87756500	87756509	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 3251 3260 +
ChrX	stalkie_big_nohaplotig	exon	87760893	87760902	70	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 3176 3185 +
ChrX	stalkie_big_nohaplotig	exon	87781538	87781539	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 3174 3175 +
ChrX	stalkie_big_nohaplotig	exon	87783830	87783837	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 3144 3151 +
ChrX	stalkie_big_nohaplotig	exon	87791180	87791228	59	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 3085 3132 +
ChrX	stalkie_big_nohaplotig	exon	87793743	87793779	50	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 3019 3084 +
ChrX	stalkie_big_nohaplotig	exon	87801434	87801440	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 3012 3018 +
ChrX	stalkie_big_nohaplotig	exon	87802698	87802706	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 3003 3011 +
ChrX	stalkie_big_nohaplotig	exon	87813407	87813419	92	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2990 3002 +
ChrX	stalkie_big_nohaplotig	exon	87815714	87815722	88	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2916 2924 +
ChrX	stalkie_big_nohaplotig	exon	87817939	87817943	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2911 2915 +
ChrX	stalkie_big_nohaplotig	exon	87822181	87822184	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2907 2910 +
ChrX	stalkie_big_nohaplotig	exon	87826730	87826737	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2875 2882 +
ChrX	stalkie_big_nohaplotig	exon	87833317	87833330	92	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2817 2830 +
ChrX	stalkie_big_nohaplotig	exon	87839461	87839478	84	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2798 2816 +
ChrX	stalkie_big_nohaplotig	exon	87842237	87842264	67	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2773 2797 +
ChrX	stalkie_big_nohaplotig	exon	87845072	87845073	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2771 2772 +
ChrX	stalkie_big_nohaplotig	exon	87848961	87848962	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2769 2770 +
ChrX	stalkie_big_nohaplotig	exon	87849759	87849762	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2765 2768 +
ChrX	stalkie_big_nohaplotig	exon	87854765	87854771	85	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2758 2764 +
ChrX	stalkie_big_nohaplotig	exon	87862232	87862238	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2751 2757 +
ChrX	stalkie_big_nohaplotig	exon	87883683	87883689	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2744 2750 +
ChrX	stalkie_big_nohaplotig	exon	87907858	87907868	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2733 2743 +
ChrX	stalkie_big_nohaplotig	exon	87914061	87914063	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2730 2732 +
ChrX	stalkie_big_nohaplotig	exon	87920541	87920551	81	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2719 2729 +
ChrX	stalkie_big_nohaplotig	exon	87924725	87924728	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2715 2718 +
ChrX	stalkie_big_nohaplotig	exon	87932320	87932329	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2705 2714 +
ChrX	stalkie_big_nohaplotig	exon	87932443	87932450	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2697 2704 +
ChrX	stalkie_big_nohaplotig	exon	87935918	87935919	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2695 2696 +
ChrX	stalkie_big_nohaplotig	exon	87944510	87944521	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2596 2607 +
ChrX	stalkie_big_nohaplotig	exon	87948964	87948970	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2589 2595 +
ChrX	stalkie_big_nohaplotig	exon	87955838	87955839	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2587 2588 +
ChrX	stalkie_big_nohaplotig	exon	87958083	87958090	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2579 2586 +
ChrX	stalkie_big_nohaplotig	exon	87965719	87965726	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2571 2578 +
ChrX	stalkie_big_nohaplotig	exon	87973791	87973798	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2563 2570 +
ChrX	stalkie_big_nohaplotig	exon	87977005	87977072	53	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2503 2562 +
ChrX	stalkie_big_nohaplotig	exon	87984794	87984798	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2498 2502 +
ChrX	stalkie_big_nohaplotig	exon	87985578	87985582	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2493 2497 +
ChrX	stalkie_big_nohaplotig	exon	87988774	87988780	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2486 2492 +
ChrX	stalkie_big_nohaplotig	exon	87990722	87990732	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2475 2485 +
ChrX	stalkie_big_nohaplotig	exon	87996989	87997002	78	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2461 2474 +
ChrX	stalkie_big_nohaplotig	exon	88004654	88004661	87	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2453 2460 +
ChrX	stalkie_big_nohaplotig	exon	88026133	88026135	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2450 2452 +
ChrX	stalkie_big_nohaplotig	exon	88028030	88028039	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2440 2449 +
ChrX	stalkie_big_nohaplotig	exon	88030267	88030281	73	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2425 2439 +
ChrX	stalkie_big_nohaplotig	exon	88042118	88042124	85	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2418 2424 +
ChrX	stalkie_big_nohaplotig	exon	88043235	88043244	90	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2408 2417 +
ChrX	stalkie_big_nohaplotig	exon	88046566	88046573	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2400 2407 +
ChrX	stalkie_big_nohaplotig	exon	88047788	88047795	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2392 2399 +
ChrX	stalkie_big_nohaplotig	exon	88054768	88054784	82	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2376 2391 +
ChrX	stalkie_big_nohaplotig	exon	88062442	88062445	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2372 2375 +
ChrX	stalkie_big_nohaplotig	exon	88064846	88064854	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2363 2371 +
ChrX	stalkie_big_nohaplotig	exon	88076184	88076195	66	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2352 2362 +
ChrX	stalkie_big_nohaplotig	exon	88111913	88111920	87	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2344 2351 +
ChrX	stalkie_big_nohaplotig	exon	88119368	88119377	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2334 2343 +
ChrX	stalkie_big_nohaplotig	exon	88124537	88124547	81	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2323 2333 +
ChrX	stalkie_big_nohaplotig	exon	88175100	88175103	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 2319 2322 +
ChrX	stalkie_big_nohaplotig	exon	89509931	89512248	100	-	.	Parent=comp155963_c0_seq1.mrna1;Target=comp155963_c0_seq1 1 2318 +
ChrX	stalkie_big_nohaplotig	CDS	89510835	89511014	.	-	0	Parent=comp155963_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87935374	87936242	.	+	.	ID=comp152560_c1_seq1.mrna1;geneID=comp152560_c1_seq1.path1;Name=comp152560_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=869;mismatches=0;indels=0;unknowns=0;Target=comp152560_c1_seq1 869 1 .;CDS_Target=comp152560_c1_seq1 539 396 .;locus=RLOC_00004673
ChrX	stalkie_big_nohaplotig	exon	87935374	87936242	100	+	.	Parent=comp152560_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	87935769	87935912	.	+	0	Parent=comp152560_c1_seq1.mrna1
ChrX	gffcl	locus	87339281	87378604	.	-	.	ID=RLOC_00004674;geneIDs=comp161851_c0_seq1.path1;transcripts=comp161851_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87339281	87378604	.	-	.	ID=comp161851_c0_seq1.mrna1;geneID=comp161851_c0_seq1.path1;Name=comp161851_c0_seq1;Dir=antisensecoverage=89.5;identity=86.3;matches=1378;mismatches=133;indels=86;unknowns=0;Target=comp161851_c0_seq1 810 944 .;locus=RLOC_00004674
ChrX	stalkie_big_nohaplotig	exon	87339281	87339814	77	-	.	Parent=comp161851_c0_seq1.mrna1;Target=comp161851_c0_seq1 87 540 -
ChrX	stalkie_big_nohaplotig	exon	87339825	87340299	89	-	.	Parent=comp161851_c0_seq1.mrna1;Target=comp161851_c0_seq1 573 1046 -
ChrX	stalkie_big_nohaplotig	exon	87377796	87378306	91	-	.	Parent=comp161851_c0_seq1.mrna1;Target=comp161851_c0_seq1 1047 1555 -
ChrX	stalkie_big_nohaplotig	exon	87378530	87378604	88	-	.	Parent=comp161851_c0_seq1.mrna1;Target=comp161851_c0_seq1 1556 1631 -
ChrX	stalkie_big_nohaplotig	CDS	87340063	87340197	.	-	0	Parent=comp161851_c0_seq1.mrna1
ChrX	gffcl	locus	87356798	87357364	.	-	.	ID=RLOC_00004675;geneIDs=comp153155_c2_seq1.path1;transcripts=comp153155_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87356798	87357364	.	-	.	ID=comp153155_c2_seq1.mrna1;geneID=comp153155_c2_seq1.path1;Name=comp153155_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=564;mismatches=3;indels=1;unknowns=0;Target=comp153155_c2_seq1 568 1 .;CDS_Target=comp153155_c2_seq1 91 2 .;locus=RLOC_00004675
ChrX	stalkie_big_nohaplotig	exon	87356798	87357364	99	-	.	Parent=comp153155_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	87357275	87357363	.	-	0	Parent=comp153155_c2_seq1.mrna1
ChrX	gffcl	locus	87362726	87364019	.	-	.	ID=RLOC_00004676;geneIDs=ORF1254.path3;transcripts=ORF1254.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	87362726	87364019	.	-	.	ID=ORF1254.mrna3;geneID=ORF1254.path3;Name=ORF1254;Dir=sensecoverage=100.0;identity=99.4;matches=1157;mismatches=7;indels=0;unknowns=0;locus=RLOC_00004676
ChrX	stalkie_big_nohaplotig	exon	87362726	87363127	99	-	.	Parent=ORF1254.mrna3;Target=ORF1254 763 1164 +
ChrX	stalkie_big_nohaplotig	exon	87363191	87363463	99	-	.	Parent=ORF1254.mrna3;Target=ORF1254 490 762 +
ChrX	stalkie_big_nohaplotig	exon	87363531	87364019	99	-	.	Parent=ORF1254.mrna3;Target=ORF1254 1 489 +
ChrX	stalkie_big_nohaplotig	CDS	87362726	87363127	.	-	0	Parent=ORF1254.mrna3;Target=ORF1254 763 1164 +
ChrX	stalkie_big_nohaplotig	CDS	87363191	87363463	.	-	0	Parent=ORF1254.mrna3;Target=ORF1254 490 762 +
ChrX	stalkie_big_nohaplotig	CDS	87363531	87364019	.	-	0	Parent=ORF1254.mrna3;Target=ORF1254 1 489 +
ChrX	gffcl	locus	87373111	87374915	.	+	.	ID=RLOC_00004677;geneIDs=comp159486_c0_seq1.path1;transcripts=comp159486_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87373111	87374915	.	+	.	ID=comp159486_c0_seq1.mrna1;geneID=comp159486_c0_seq1.path1;Name=comp159486_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1804;mismatches=0;indels=2;unknowns=0;Target=comp159486_c0_seq1 1805 1 .;CDS_Target=comp159486_c0_seq1 1034 813 .;locus=RLOC_00004677
ChrX	stalkie_big_nohaplotig	exon	87373111	87374915	99	+	.	Parent=comp159486_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	87373923	87374144	.	+	0	Parent=comp159486_c0_seq1.mrna1
ChrX	gffcl	locus	87398642	87411109	.	+	.	ID=RLOC_00004679;geneIDs=ORF1254.path2;transcripts=ORF1254.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	87398642	87411109	.	+	.	ID=ORF1254.mrna2;geneID=ORF1254.path2;Name=ORF1254;Dir=sensecoverage=100.0;identity=99.7;matches=1160;mismatches=4;indels=0;unknowns=0;locus=RLOC_00004679
ChrX	stalkie_big_nohaplotig	exon	87398642	87399130	99	+	.	Parent=ORF1254.mrna2;Target=ORF1254 1 489 +
ChrX	stalkie_big_nohaplotig	exon	87399198	87399470	99	+	.	Parent=ORF1254.mrna2;Target=ORF1254 490 762 +
ChrX	stalkie_big_nohaplotig	exon	87410708	87411109	99	+	.	Parent=ORF1254.mrna2;Target=ORF1254 763 1164 +
ChrX	stalkie_big_nohaplotig	CDS	87398642	87399130	.	+	0	Parent=ORF1254.mrna2;Target=ORF1254 1 489 +
ChrX	stalkie_big_nohaplotig	CDS	87399198	87399470	.	+	0	Parent=ORF1254.mrna2;Target=ORF1254 490 762 +
ChrX	stalkie_big_nohaplotig	CDS	87410708	87411109	.	+	0	Parent=ORF1254.mrna2;Target=ORF1254 763 1164 +
ChrX	gffcl	locus	87404436	87406376	.	-	.	ID=RLOC_00004680;geneIDs=AAEL017378.1.path1;transcripts=AAEL017378.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87404436	87406376	.	-	.	ID=AAEL017378.1.mrna1;geneID=AAEL017378.1.path1;Name=AAEL017378.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1930;mismatches=10;indels=2;unknowns=0;Target=AAEL017378.1 1941 1 .;locus=RLOC_00004680
ChrX	stalkie_big_nohaplotig	exon	87404436	87406376	99	-	.	Parent=AAEL017378.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	87404436	87406376	.	-	0	Parent=AAEL017378.1.mrna1
ChrX	gffcl	locus	87419759	87420136	.	+	.	ID=RLOC_00004681;geneIDs=comp104858_c0_seq1.path1;transcripts=comp104858_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87419759	87420136	.	+	.	ID=comp104858_c0_seq1.mrna1;geneID=comp104858_c0_seq1.path1;Name=comp104858_c0_seq1;Dir=indeterminatecoverage=96.2;identity=100.0;matches=378;mismatches=0;indels=0;unknowns=0;Target=comp104858_c0_seq1 378 1 .;CDS_Target=comp104858_c0_seq1 103 35 .;locus=RLOC_00004681
ChrX	stalkie_big_nohaplotig	exon	87419759	87420136	100	+	.	Parent=comp104858_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	87419793	87419861	.	+	0	Parent=comp104858_c0_seq1.mrna1
ChrX	gffcl	locus	87420477	87422628	.	-	.	ID=RLOC_00004682;geneIDs=comp156985_c0_seq1.path1;transcripts=comp156985_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87420477	87422628	.	-	.	ID=comp156985_c0_seq1.mrna1;geneID=comp156985_c0_seq1.path1;Name=comp156985_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2150;mismatches=2;indels=0;unknowns=0;Target=comp156985_c0_seq1 2152 1 .;CDS_Target=comp156985_c0_seq1 1105 1010 .;locus=RLOC_00004682
ChrX	stalkie_big_nohaplotig	exon	87420477	87422628	99	-	.	Parent=comp156985_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	87421524	87421619	.	-	0	Parent=comp156985_c0_seq1.mrna1
ChrX	gffcl	locus	87422668	87478497	.	-	.	ID=RLOC_00004683;geneIDs=comp89110_c0_seq1.path1;transcripts=comp89110_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87422668	87478497	.	-	.	ID=comp89110_c0_seq1.mrna1;geneID=comp89110_c0_seq1.path1;Name=comp89110_c0_seq1;Dir=indeterminatecoverage=88.5;identity=88.2;matches=1117;mismatches=96;indels=53;unknowns=0;Target=comp89110_c0_seq1 1094 975 .;locus=RLOC_00004683
ChrX	stalkie_big_nohaplotig	exon	87422668	87423476	99	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 1463 655 .
ChrX	stalkie_big_nohaplotig	exon	87426970	87426978	88	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 654 646 .
ChrX	stalkie_big_nohaplotig	exon	87435152	87435158	85	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 645 639 .
ChrX	stalkie_big_nohaplotig	exon	87436633	87436640	100	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 638 631 .
ChrX	stalkie_big_nohaplotig	exon	87438058	87438124	56	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 630 555 .
ChrX	stalkie_big_nohaplotig	exon	87440709	87440712	100	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 554 551 .
ChrX	stalkie_big_nohaplotig	exon	87443034	87443038	100	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 550 546 .
ChrX	stalkie_big_nohaplotig	exon	87445078	87445081	100	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 545 542 .
ChrX	stalkie_big_nohaplotig	exon	87446870	87446877	100	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 541 534 .
ChrX	stalkie_big_nohaplotig	exon	87447032	87447038	100	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 533 527 .
ChrX	stalkie_big_nohaplotig	exon	87452064	87452086	46	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 526 488 .
ChrX	stalkie_big_nohaplotig	exon	87452101	87452107	100	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 452 446 .
ChrX	stalkie_big_nohaplotig	exon	87452324	87452447	53	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 445 312 .
ChrX	stalkie_big_nohaplotig	exon	87453449	87453455	100	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 311 305 .
ChrX	stalkie_big_nohaplotig	exon	87454001	87454051	68	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 304 262 .
ChrX	stalkie_big_nohaplotig	exon	87455891	87455895	100	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 261 257 .
ChrX	stalkie_big_nohaplotig	exon	87455959	87455962	100	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 256 253 .
ChrX	stalkie_big_nohaplotig	exon	87456912	87456915	100	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 252 249 .
ChrX	stalkie_big_nohaplotig	exon	87457705	87457713	100	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 248 240 .
ChrX	stalkie_big_nohaplotig	exon	87460177	87460187	81	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 239 229 .
ChrX	stalkie_big_nohaplotig	exon	87471094	87471112	78	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 228 210 .
ChrX	stalkie_big_nohaplotig	exon	87472855	87472859	100	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 209 205 .
ChrX	stalkie_big_nohaplotig	exon	87473414	87473423	100	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 204 195 .
ChrX	stalkie_big_nohaplotig	exon	87478481	87478497	71	-	.	Parent=comp89110_c0_seq1.mrna1;Target=comp89110_c0_seq1 189 169 .
ChrX	stalkie_big_nohaplotig	CDS	87423037	87423156	.	-	0	Parent=comp89110_c0_seq1.mrna1
ChrX	gffcl	locus	87424531	87427999	.	-	.	ID=RLOC_00004684;geneIDs=FBgn0032840.1.path1;transcripts=FBgn0032840.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87424531	87427999	.	-	.	ID=FBgn0032840.1.mrna1;geneID=FBgn0032840.1.path1;Name=FBgn0032840.1;Dir=sensecoverage=100.0;identity=100.0;matches=912;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004684
ChrX	stalkie_big_nohaplotig	exon	87424531	87424578	100	-	.	Parent=FBgn0032840.1.mrna1;Target=FBgn0032840.1 865 912 +
ChrX	stalkie_big_nohaplotig	exon	87426989	87427315	100	-	.	Parent=FBgn0032840.1.mrna1;Target=FBgn0032840.1 538 864 +
ChrX	stalkie_big_nohaplotig	exon	87427395	87427825	100	-	.	Parent=FBgn0032840.1.mrna1;Target=FBgn0032840.1 107 537 +
ChrX	stalkie_big_nohaplotig	exon	87427894	87427999	100	-	.	Parent=FBgn0032840.1.mrna1;Target=FBgn0032840.1 1 106 +
ChrX	stalkie_big_nohaplotig	CDS	87424531	87424578	.	-	0	Parent=FBgn0032840.1.mrna1;Target=FBgn0032840.1 865 912 +
ChrX	stalkie_big_nohaplotig	CDS	87426989	87427315	.	-	0	Parent=FBgn0032840.1.mrna1;Target=FBgn0032840.1 538 864 +
ChrX	stalkie_big_nohaplotig	CDS	87427395	87427825	.	-	2	Parent=FBgn0032840.1.mrna1;Target=FBgn0032840.1 107 537 +
ChrX	stalkie_big_nohaplotig	CDS	87427894	87427999	.	-	0	Parent=FBgn0032840.1.mrna1;Target=FBgn0032840.1 1 106 +
ChrX	gffcl	locus	87589236	87591742	.	-	.	ID=RLOC_00004686;geneIDs=Dp_FBgn0075457.1.path2,comp156379_c0_seq1.path1;transcripts=comp156379_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87589236	87591742	.	-	.	ID=comp156379_c0_seq1.mrna1;geneID=comp156379_c0_seq1.path1;Name=comp156379_c0_seq1;Dir=sensecoverage=99.7;identity=94.3;matches=1676;mismatches=65;indels=37;unknowns=0;locus=RLOC_00004686
ChrX	stalkie_big_nohaplotig	exon	87589236	87589469	89	-	.	Parent=comp156379_c0_seq1.mrna1;Target=comp156379_c0_seq1 1518 1778 +
ChrX	stalkie_big_nohaplotig	exon	87589526	87589786	100	-	.	Parent=comp156379_c0_seq1.mrna1;Target=comp156379_c0_seq1 1257 1517 +
ChrX	stalkie_big_nohaplotig	exon	87589849	87590224	100	-	.	Parent=comp156379_c0_seq1.mrna1;Target=comp156379_c0_seq1 881 1256 +
ChrX	stalkie_big_nohaplotig	exon	87590750	87590972	99	-	.	Parent=comp156379_c0_seq1.mrna1;Target=comp156379_c0_seq1 658 880 +
ChrX	stalkie_big_nohaplotig	exon	87591033	87591177	96	-	.	Parent=comp156379_c0_seq1.mrna1;Target=comp156379_c0_seq1 514 657 +
ChrX	stalkie_big_nohaplotig	exon	87591240	87591742	86	-	.	Parent=comp156379_c0_seq1.mrna1;Target=comp156379_c0_seq1 2 513 +
ChrX	stalkie_big_nohaplotig	CDS	87590962	87590972	.	-	1	Parent=comp156379_c0_seq1.mrna1;Target=comp156379_c0_seq1 658 668 +
ChrX	stalkie_big_nohaplotig	CDS	87591033	87591124	.	-	0	Parent=comp156379_c0_seq1.mrna1;Target=comp156379_c0_seq1 567 657 +
ChrX	gffcl	locus	87592935	87595441	.	+	.	ID=RLOC_00004687;geneIDs=comp156379_c0_seq1.path2;transcripts=comp156379_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	87592935	87595441	.	+	.	ID=comp156379_c0_seq1.mrna2;geneID=comp156379_c0_seq1.path2;Name=comp156379_c0_seq1;Dir=sensecoverage=99.7;identity=94.2;matches=1675;mismatches=66;indels=37;unknowns=0;locus=RLOC_00004687
ChrX	stalkie_big_nohaplotig	exon	87592935	87593437	86	+	.	Parent=comp156379_c0_seq1.mrna2;Target=comp156379_c0_seq1 2 513 +
ChrX	stalkie_big_nohaplotig	exon	87593500	87593644	96	+	.	Parent=comp156379_c0_seq1.mrna2;Target=comp156379_c0_seq1 514 657 +
ChrX	stalkie_big_nohaplotig	exon	87593705	87593927	99	+	.	Parent=comp156379_c0_seq1.mrna2;Target=comp156379_c0_seq1 658 880 +
ChrX	stalkie_big_nohaplotig	exon	87594453	87594828	100	+	.	Parent=comp156379_c0_seq1.mrna2;Target=comp156379_c0_seq1 881 1256 +
ChrX	stalkie_big_nohaplotig	exon	87594891	87595151	100	+	.	Parent=comp156379_c0_seq1.mrna2;Target=comp156379_c0_seq1 1257 1517 +
ChrX	stalkie_big_nohaplotig	exon	87595208	87595441	89	+	.	Parent=comp156379_c0_seq1.mrna2;Target=comp156379_c0_seq1 1518 1778 +
ChrX	stalkie_big_nohaplotig	CDS	87593553	87593644	.	+	0	Parent=comp156379_c0_seq1.mrna2;Target=comp156379_c0_seq1 567 657 +
ChrX	stalkie_big_nohaplotig	CDS	87593705	87593715	.	+	1	Parent=comp156379_c0_seq1.mrna2;Target=comp156379_c0_seq1 658 668 +
ChrX	gffcl	locus	87602000	87602855	.	-	.	ID=RLOC_00004688;geneIDs=FBgn0005655.1.path1;transcripts=FBgn0005655.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87602000	87602855	.	-	.	ID=FBgn0005655.1.mrna1;geneID=FBgn0005655.1.path1;Name=FBgn0005655.1;Dir=sensecoverage=100.0;identity=100.0;matches=789;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004688
ChrX	stalkie_big_nohaplotig	exon	87602000	87602671	100	-	.	Parent=FBgn0005655.1.mrna1;Target=FBgn0005655.1 118 789 +
ChrX	stalkie_big_nohaplotig	exon	87602739	87602855	100	-	.	Parent=FBgn0005655.1.mrna1;Target=FBgn0005655.1 1 117 +
ChrX	stalkie_big_nohaplotig	CDS	87602000	87602671	.	-	0	Parent=FBgn0005655.1.mrna1;Target=FBgn0005655.1 118 789 +
ChrX	stalkie_big_nohaplotig	CDS	87602739	87602855	.	-	0	Parent=FBgn0005655.1.mrna1;Target=FBgn0005655.1 1 117 +
ChrX	gffcl	locus	87608656	87609539	.	+	.	ID=RLOC_00004689;geneIDs=comp148688_c0_seq1.path1;transcripts=comp148688_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87608656	87609539	.	+	.	ID=comp148688_c0_seq1.mrna1;geneID=comp148688_c0_seq1.path1;Name=comp148688_c0_seq1;Dir=indeterminatecoverage=98.8;identity=100.0;matches=884;mismatches=0;indels=0;unknowns=0;Target=comp148688_c0_seq1 895 12 .;CDS_Target=comp148688_c0_seq1 212 135 .;locus=RLOC_00004689
ChrX	stalkie_big_nohaplotig	exon	87608656	87609539	100	+	.	Parent=comp148688_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	87608779	87608856	.	+	0	Parent=comp148688_c0_seq1.mrna1
ChrX	gffcl	locus	87610836	87613030	.	+	.	ID=RLOC_00004690;geneIDs=FBgn0038316.1.path1;transcripts=FBgn0038316.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87610836	87613030	.	+	.	ID=FBgn0038316.1.mrna1;geneID=FBgn0038316.1.path1;Name=FBgn0038316.1;Dir=sensecoverage=100.0;identity=100.0;matches=1545;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004690
ChrX	stalkie_big_nohaplotig	exon	87610836	87611163	100	+	.	Parent=FBgn0038316.1.mrna1;Target=FBgn0038316.1 1 328 +
ChrX	stalkie_big_nohaplotig	exon	87611309	87611444	100	+	.	Parent=FBgn0038316.1.mrna1;Target=FBgn0038316.1 329 464 +
ChrX	stalkie_big_nohaplotig	exon	87611950	87613030	100	+	.	Parent=FBgn0038316.1.mrna1;Target=FBgn0038316.1 465 1545 +
ChrX	stalkie_big_nohaplotig	CDS	87610836	87611163	.	+	0	Parent=FBgn0038316.1.mrna1;Target=FBgn0038316.1 1 328 +
ChrX	stalkie_big_nohaplotig	CDS	87611309	87611444	.	+	2	Parent=FBgn0038316.1.mrna1;Target=FBgn0038316.1 329 464 +
ChrX	stalkie_big_nohaplotig	CDS	87611950	87613030	.	+	1	Parent=FBgn0038316.1.mrna1;Target=FBgn0038316.1 465 1545 +
ChrX	gffcl	locus	87615380	87616338	.	+	.	ID=RLOC_00004691;geneIDs=comp142151_c0_seq1.path1;transcripts=comp142151_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87615380	87616338	.	+	.	ID=comp142151_c0_seq1.mrna1;geneID=comp142151_c0_seq1.path1;Name=comp142151_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=959;mismatches=0;indels=0;unknowns=0;Target=comp142151_c0_seq1 959 1 .;CDS_Target=comp142151_c0_seq1 926 729 .;locus=RLOC_00004691
ChrX	stalkie_big_nohaplotig	exon	87615380	87616338	100	+	.	Parent=comp142151_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	87616108	87616305	.	+	0	Parent=comp142151_c0_seq1.mrna1
ChrX	gffcl	locus	87616380	87616760	.	-	.	ID=RLOC_00004692;geneIDs=Dp_FBgn0249059.1.path1;transcripts=Dp_FBgn0249059.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87616380	87616760	.	-	.	ID=Dp_FBgn0249059.1.mrna1;geneID=Dp_FBgn0249059.1.path1;Name=Dp_FBgn0249059.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=381;mismatches=0;indels=0;unknowns=0;Target=Dp_FBgn0249059.1 381 1 .;locus=RLOC_00004692
ChrX	stalkie_big_nohaplotig	exon	87616380	87616760	100	-	.	Parent=Dp_FBgn0249059.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	87616380	87616760	.	-	0	Parent=Dp_FBgn0249059.1.mrna1
ChrX	gffcl	locus	87619868	87620580	.	-	.	ID=RLOC_00004693;geneIDs=comp146534_c1_seq1.path1;transcripts=comp146534_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87619868	87620580	.	-	.	ID=comp146534_c1_seq1.mrna1;geneID=comp146534_c1_seq1.path1;Name=comp146534_c1_seq1;Dir=indeterminatecoverage=99.0;identity=99.9;matches=712;mismatches=1;indels=0;unknowns=0;Target=comp146534_c1_seq1 713 1 .;CDS_Target=comp146534_c1_seq1 158 102 .;locus=RLOC_00004693
ChrX	stalkie_big_nohaplotig	exon	87619868	87620580	99	-	.	Parent=comp146534_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	87620423	87620479	.	-	0	Parent=comp146534_c1_seq1.mrna1
ChrX	gffcl	locus	87622118	87624507	.	-	.	ID=RLOC_00004694;geneIDs=comp155949_c0_seq1.path1;transcripts=comp155949_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87622118	87624507	.	-	.	ID=comp155949_c0_seq1.mrna1;geneID=comp155949_c0_seq1.path1;Name=comp155949_c0_seq1;Dir=indeterminatecoverage=82.8;identity=97.0;matches=2319;mismatches=18;indels=53;unknowns=0;Target=comp155949_c0_seq1 2337 1 .;CDS_Target=comp155949_c0_seq1 1281 1093 .;locus=RLOC_00004694
ChrX	stalkie_big_nohaplotig	exon	87622118	87624507	97	-	.	Parent=comp155949_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	87623227	87623415	.	-	0	Parent=comp155949_c0_seq1.mrna1
ChrX	gffcl	locus	87721237	87787108	.	-	.	ID=RLOC_00004696;geneIDs=comp158838_c0_seq1.path1;transcripts=comp158838_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87721237	87787108	.	-	.	ID=comp158838_c0_seq1.mrna1;geneID=comp158838_c0_seq1.path1;Name=comp158838_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=1672;mismatches=18;indels=8;unknowns=0;locus=RLOC_00004696
ChrX	stalkie_big_nohaplotig	exon	87721237	87721509	92	-	.	Parent=comp158838_c0_seq1.mrna1;Target=comp158838_c0_seq1 1698 1418 .
ChrX	stalkie_big_nohaplotig	exon	87785692	87787108	99	-	.	Parent=comp158838_c0_seq1.mrna1;Target=comp158838_c0_seq1 1417 1 .
ChrX	stalkie_big_nohaplotig	CDS	87721238	87721509	.	-	1	Parent=comp158838_c0_seq1.mrna1;Target=comp158838_c0_seq1 1697 1418 .
ChrX	stalkie_big_nohaplotig	CDS	87785692	87786779	.	-	0	Parent=comp158838_c0_seq1.mrna1;Target=comp158838_c0_seq1 1417 330 .
ChrX	gffcl	locus	87755647	89735518	.	+	.	ID=RLOC_00004697;geneIDs=comp163951_c1_seq1.path1;transcripts=comp163951_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87755647	89735518	.	+	.	ID=comp163951_c1_seq1.mrna1;geneID=comp163951_c1_seq1.path1;Name=comp163951_c1_seq1;Dir=indeterminatecoverage=72.2;identity=95.6;matches=1013;mismatches=38;indels=9;unknowns=0;Target=comp163951_c1_seq1 731 603 .;locus=RLOC_00004697
ChrX	stalkie_big_nohaplotig	exon	87755647	87756026	95	+	.	Parent=comp163951_c1_seq1.mrna1;Target=comp163951_c1_seq1 470 91 .
ChrX	stalkie_big_nohaplotig	exon	87756212	87756826	96	+	.	Parent=comp163951_c1_seq1.mrna1;Target=comp163951_c1_seq1 1084 471 .
ChrX	stalkie_big_nohaplotig	exon	89688925	89688928	100	+	.	Parent=comp163951_c1_seq1.mrna1;Target=comp163951_c1_seq1 1127 1124 .
ChrX	stalkie_big_nohaplotig	exon	89709130	89709133	100	+	.	Parent=comp163951_c1_seq1.mrna1;Target=comp163951_c1_seq1 1132 1129 .
ChrX	stalkie_big_nohaplotig	exon	89714798	89714800	100	+	.	Parent=comp163951_c1_seq1.mrna1;Target=comp163951_c1_seq1 1135 1133 .
ChrX	stalkie_big_nohaplotig	exon	89721869	89721879	27	+	.	Parent=comp163951_c1_seq1.mrna1;Target=comp163951_c1_seq1 1138 1136 .
ChrX	stalkie_big_nohaplotig	exon	89723338	89723348	100	+	.	Parent=comp163951_c1_seq1.mrna1;Target=comp163951_c1_seq1 1149 1139 .
ChrX	stalkie_big_nohaplotig	exon	89723394	89723402	100	+	.	Parent=comp163951_c1_seq1.mrna1;Target=comp163951_c1_seq1 1208 1200 .
ChrX	stalkie_big_nohaplotig	exon	89725883	89725885	100	+	.	Parent=comp163951_c1_seq1.mrna1;Target=comp163951_c1_seq1 1214 1212 .
ChrX	stalkie_big_nohaplotig	exon	89732914	89732915	100	+	.	Parent=comp163951_c1_seq1.mrna1;Target=comp163951_c1_seq1 1216 1215 .
ChrX	stalkie_big_nohaplotig	exon	89735502	89735518	100	+	.	Parent=comp163951_c1_seq1.mrna1;Target=comp163951_c1_seq1 1233 1217 .
ChrX	stalkie_big_nohaplotig	CDS	87756344	87756472	.	+	0	Parent=comp163951_c1_seq1.mrna1
ChrX	gffcl	locus	87834322	87834599	.	+	.	ID=RLOC_00004700;geneIDs=comp163893_c0_seq1.path1;transcripts=comp163893_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87834322	87834599	.	+	.	ID=comp163893_c0_seq1.mrna1;geneID=comp163893_c0_seq1.path1;Name=comp163893_c0_seq1;Dir=indeterminatecoverage=7.1;identity=98.9;matches=275;mismatches=3;indels=0;unknowns=0;Target=comp163893_c0_seq1 278 1 .;locus=RLOC_00004700
ChrX	stalkie_big_nohaplotig	exon	87834322	87834599	98	+	.	Parent=comp163893_c0_seq1.mrna1
ChrX	gffcl	locus	87847640	87848121	.	+	.	ID=RLOC_00004701;geneIDs=comp152975_c0_seq1.path7;transcripts=comp152975_c0_seq1.mrna7
ChrX	stalkie_big_nohaplotig	mRNA	87847640	87848121	.	+	.	ID=comp152975_c0_seq1.mrna7;geneID=comp152975_c0_seq1.path7;Name=comp152975_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=477;mismatches=5;indels=0;unknowns=0;Target=comp152975_c0_seq1 482 1 .;CDS_Target=comp152975_c0_seq1 185 63 .;locus=RLOC_00004701
ChrX	stalkie_big_nohaplotig	exon	87847640	87848121	98	+	.	Parent=comp152975_c0_seq1.mrna7
ChrX	stalkie_big_nohaplotig	CDS	87847702	87847824	.	+	0	Parent=comp152975_c0_seq1.mrna7
ChrX	gffcl	locus	87865090	87866652	.	+	.	ID=RLOC_00004702;geneIDs=comp157987_c0_seq1.path1;transcripts=comp157987_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87865090	87866652	.	+	.	ID=comp157987_c0_seq1.mrna1;geneID=comp157987_c0_seq1.path1;Name=comp157987_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.2;matches=1562;mismatches=1;indels=12;unknowns=0;Target=comp157987_c0_seq1 1575 1 .;CDS_Target=comp157987_c0_seq1 332 267 .;locus=RLOC_00004702
ChrX	stalkie_big_nohaplotig	exon	87865090	87866652	99	+	.	Parent=comp157987_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	87865356	87865421	.	+	0	Parent=comp157987_c0_seq1.mrna1
ChrX	gffcl	locus	87926560	87941014	.	+	.	ID=RLOC_00004703;geneIDs=FBgn0004811.1.path1;transcripts=FBgn0004811.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87926560	87941014	.	+	.	ID=FBgn0004811.1.mrna1;geneID=FBgn0004811.1.path1;Name=FBgn0004811.1;Dir=sensecoverage=100.0;identity=100.0;matches=1176;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004703
ChrX	stalkie_big_nohaplotig	exon	87926560	87926784	100	+	.	Parent=FBgn0004811.1.mrna1;Target=FBgn0004811.1 1 225 +
ChrX	stalkie_big_nohaplotig	exon	87931550	87932088	100	+	.	Parent=FBgn0004811.1.mrna1;Target=FBgn0004811.1 226 764 +
ChrX	stalkie_big_nohaplotig	exon	87940533	87940702	100	+	.	Parent=FBgn0004811.1.mrna1;Target=FBgn0004811.1 765 934 +
ChrX	stalkie_big_nohaplotig	exon	87940773	87941014	100	+	.	Parent=FBgn0004811.1.mrna1;Target=FBgn0004811.1 935 1176 +
ChrX	stalkie_big_nohaplotig	CDS	87926560	87926784	.	+	0	Parent=FBgn0004811.1.mrna1;Target=FBgn0004811.1 1 225 +
ChrX	stalkie_big_nohaplotig	CDS	87931550	87932088	.	+	0	Parent=FBgn0004811.1.mrna1;Target=FBgn0004811.1 226 764 +
ChrX	stalkie_big_nohaplotig	CDS	87940533	87940702	.	+	1	Parent=FBgn0004811.1.mrna1;Target=FBgn0004811.1 765 934 +
ChrX	stalkie_big_nohaplotig	CDS	87940773	87941014	.	+	2	Parent=FBgn0004811.1.mrna1;Target=FBgn0004811.1 935 1176 +
ChrX	gffcl	locus	87936275	87937478	.	-	.	ID=RLOC_00004704;geneIDs=comp116263_c0_seq1.path1;transcripts=comp116263_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	87936275	87937478	.	-	.	ID=comp116263_c0_seq1.mrna1;geneID=comp116263_c0_seq1.path1;Name=comp116263_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1204;mismatches=0;indels=0;unknowns=0;Target=comp116263_c0_seq1 1204 1 .;CDS_Target=comp116263_c0_seq1 542 369 .;locus=RLOC_00004704
ChrX	stalkie_big_nohaplotig	exon	87936275	87937478	100	-	.	Parent=comp116263_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	87936937	87937110	.	-	0	Parent=comp116263_c0_seq1.mrna1
ChrX	gffcl	locus	88035064	88178689	.	+	.	ID=RLOC_00004706;geneIDs=comp159907_c1_seq1.path1;transcripts=comp159907_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88035064	88178689	.	+	.	ID=comp159907_c1_seq1.mrna1;geneID=comp159907_c1_seq1.path1;Name=comp159907_c1_seq1;Dir=antisensecoverage=100.0;identity=97.9;matches=1743;mismatches=14;indels=24;unknowns=0;Target=comp159907_c1_seq1 295 642 .;locus=RLOC_00004706
ChrX	stalkie_big_nohaplotig	exon	88035064	88035273	100	+	.	Parent=comp159907_c1_seq1.mrna1;Target=comp159907_c1_seq1 1617 1826 -
ChrX	stalkie_big_nohaplotig	exon	88045258	88045261	100	+	.	Parent=comp159907_c1_seq1.mrna1;Target=comp159907_c1_seq1 1613 1616 -
ChrX	stalkie_big_nohaplotig	exon	88052386	88052387	100	+	.	Parent=comp159907_c1_seq1.mrna1;Target=comp159907_c1_seq1 1611 1612 -
ChrX	stalkie_big_nohaplotig	exon	88177044	88177470	98	+	.	Parent=comp159907_c1_seq1.mrna1;Target=comp159907_c1_seq1 1137 1563 -
ChrX	stalkie_big_nohaplotig	exon	88177576	88178689	97	+	.	Parent=comp159907_c1_seq1.mrna1;Target=comp159907_c1_seq1 1 1136 -
ChrX	stalkie_big_nohaplotig	CDS	88178048	88178395	.	+	0	Parent=comp159907_c1_seq1.mrna1
ChrX	gffcl	locus	88069759	88071129	.	-	.	ID=RLOC_00004707;geneIDs=ORF876.path1;transcripts=ORF876.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88069759	88071129	.	-	.	ID=ORF876.mrna1;geneID=ORF876.path1;Name=ORF876;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1354;mismatches=17;indels=0;unknowns=0;Target=ORF876 1371 1 .;locus=RLOC_00004707
ChrX	stalkie_big_nohaplotig	exon	88069759	88071129	98	-	.	Parent=ORF876.mrna1
ChrX	stalkie_big_nohaplotig	CDS	88069759	88071129	.	-	0	Parent=ORF876.mrna1
ChrX	gffcl	locus	88107480	88145906	.	+	.	ID=RLOC_00004708;geneIDs=FBgn0032821.1.path1;transcripts=FBgn0032821.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88107480	88145906	.	+	.	ID=FBgn0032821.1.mrna1;geneID=FBgn0032821.1.path1;Name=FBgn0032821.1;Dir=sensecoverage=100.0;identity=100.0;matches=6672;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004708
ChrX	stalkie_big_nohaplotig	exon	88107480	88108091	100	+	.	Parent=FBgn0032821.1.mrna1;Target=FBgn0032821.1 1 612 +
ChrX	stalkie_big_nohaplotig	exon	88137477	88138783	100	+	.	Parent=FBgn0032821.1.mrna1;Target=FBgn0032821.1 613 1919 +
ChrX	stalkie_big_nohaplotig	exon	88138844	88139833	100	+	.	Parent=FBgn0032821.1.mrna1;Target=FBgn0032821.1 1920 2909 +
ChrX	stalkie_big_nohaplotig	exon	88139904	88140671	100	+	.	Parent=FBgn0032821.1.mrna1;Target=FBgn0032821.1 2910 3677 +
ChrX	stalkie_big_nohaplotig	exon	88142783	88143233	100	+	.	Parent=FBgn0032821.1.mrna1;Target=FBgn0032821.1 3678 4128 +
ChrX	stalkie_big_nohaplotig	exon	88143304	88145774	100	+	.	Parent=FBgn0032821.1.mrna1;Target=FBgn0032821.1 4129 6599 +
ChrX	stalkie_big_nohaplotig	exon	88145834	88145906	100	+	.	Parent=FBgn0032821.1.mrna1;Target=FBgn0032821.1 6600 6672 +
ChrX	stalkie_big_nohaplotig	CDS	88107480	88108091	.	+	0	Parent=FBgn0032821.1.mrna1;Target=FBgn0032821.1 1 612 +
ChrX	stalkie_big_nohaplotig	CDS	88137477	88138783	.	+	0	Parent=FBgn0032821.1.mrna1;Target=FBgn0032821.1 613 1919 +
ChrX	stalkie_big_nohaplotig	CDS	88138844	88139833	.	+	1	Parent=FBgn0032821.1.mrna1;Target=FBgn0032821.1 1920 2909 +
ChrX	stalkie_big_nohaplotig	CDS	88139904	88140671	.	+	1	Parent=FBgn0032821.1.mrna1;Target=FBgn0032821.1 2910 3677 +
ChrX	stalkie_big_nohaplotig	CDS	88142783	88143233	.	+	1	Parent=FBgn0032821.1.mrna1;Target=FBgn0032821.1 3678 4128 +
ChrX	stalkie_big_nohaplotig	CDS	88143304	88145774	.	+	0	Parent=FBgn0032821.1.mrna1;Target=FBgn0032821.1 4129 6599 +
ChrX	stalkie_big_nohaplotig	CDS	88145834	88145906	.	+	1	Parent=FBgn0032821.1.mrna1;Target=FBgn0032821.1 6600 6672 +
ChrX	gffcl	locus	88149646	88150812	.	+	.	ID=RLOC_00004709;geneIDs=ORF1245.path1;transcripts=ORF1245.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88149646	88150812	.	+	.	ID=ORF1245.mrna1;geneID=ORF1245.path1;Name=ORF1245;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1163;mismatches=4;indels=0;unknowns=0;Target=ORF1245 1167 1 .;locus=RLOC_00004709
ChrX	stalkie_big_nohaplotig	exon	88149646	88150812	99	+	.	Parent=ORF1245.mrna1
ChrX	stalkie_big_nohaplotig	CDS	88149646	88150812	.	+	0	Parent=ORF1245.mrna1
ChrX	gffcl	locus	88243053	88243426	.	+	.	ID=RLOC_00004710;geneIDs=comp905997_c0_seq1.path1;transcripts=comp905997_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88243053	88243426	.	+	.	ID=comp905997_c0_seq1.mrna1;geneID=comp905997_c0_seq1.path1;Name=comp905997_c0_seq1;Dir=indeterminatecoverage=94.0;identity=100.0;matches=374;mismatches=0;indels=0;unknowns=0;Target=comp905997_c0_seq1 398 25 .;CDS_Target=comp905997_c0_seq1 286 26 .;locus=RLOC_00004710
ChrX	stalkie_big_nohaplotig	exon	88243053	88243426	100	+	.	Parent=comp905997_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	88243054	88243314	.	+	0	Parent=comp905997_c0_seq1.mrna1
ChrX	gffcl	locus	88249356	88249576	.	-	.	ID=RLOC_00004711;geneIDs=comp151855_c1_seq1.path1;transcripts=comp151855_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88249356	88249576	.	-	.	ID=comp151855_c1_seq1.mrna1;geneID=comp151855_c1_seq1.path1;Name=comp151855_c1_seq1;Dir=indeterminatecoverage=59.5;identity=87.8;matches=194;mismatches=26;indels=1;unknowns=0;Target=comp151855_c1_seq1 220 1 .;locus=RLOC_00004711
ChrX	stalkie_big_nohaplotig	exon	88249356	88249576	87	-	.	Parent=comp151855_c1_seq1.mrna1
ChrX	gffcl	locus	88250589	88251365	.	-	.	ID=RLOC_00004712;geneIDs=comp54972_c0_seq1.path1;transcripts=comp54972_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88250589	88251365	.	-	.	ID=comp54972_c0_seq1.mrna1;geneID=comp54972_c0_seq1.path1;Name=comp54972_c0_seq1;Dir=sensecoverage=98.6;identity=99.8;matches=638;mismatches=0;indels=1;unknowns=0;locus=RLOC_00004712
ChrX	stalkie_big_nohaplotig	exon	88250589	88250867	100	-	.	Parent=comp54972_c0_seq1.mrna1;Target=comp54972_c0_seq1 361 639 +
ChrX	stalkie_big_nohaplotig	exon	88250925	88251155	99	-	.	Parent=comp54972_c0_seq1.mrna1;Target=comp54972_c0_seq1 129 360 +
ChrX	stalkie_big_nohaplotig	exon	88251238	88251365	100	-	.	Parent=comp54972_c0_seq1.mrna1;Target=comp54972_c0_seq1 1 128 +
ChrX	stalkie_big_nohaplotig	CDS	88251020	88251155	.	-	2	Parent=comp54972_c0_seq1.mrna1;Target=comp54972_c0_seq1 129 265 +
ChrX	stalkie_big_nohaplotig	CDS	88251238	88251364	.	-	0	Parent=comp54972_c0_seq1.mrna1;Target=comp54972_c0_seq1 2 128 +
ChrX	gffcl	locus	88261738	88262362	.	+	.	ID=RLOC_00004713;geneIDs=comp147585_c0_seq1.path1;transcripts=comp147585_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88261738	88262362	.	+	.	ID=comp147585_c0_seq1.mrna1;geneID=comp147585_c0_seq1.path1;Name=comp147585_c0_seq1;Dir=antisensecoverage=98.9;identity=100.0;matches=557;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004713
ChrX	stalkie_big_nohaplotig	exon	88261738	88261878	100	+	.	Parent=comp147585_c0_seq1.mrna1;Target=comp147585_c0_seq1 423 563 -
ChrX	stalkie_big_nohaplotig	exon	88261947	88262362	100	+	.	Parent=comp147585_c0_seq1.mrna1;Target=comp147585_c0_seq1 7 422 -
ChrX	stalkie_big_nohaplotig	CDS	88261827	88261878	.	+	0	Parent=comp147585_c0_seq1.mrna1;Target=comp147585_c0_seq1 423 474 .
ChrX	stalkie_big_nohaplotig	CDS	88261947	88262278	.	+	2	Parent=comp147585_c0_seq1.mrna1;Target=comp147585_c0_seq1 91 422 .
ChrX	gffcl	locus	88266506	88267106	.	+	.	ID=RLOC_00004714;geneIDs=comp60714_c0_seq1.path1;transcripts=comp60714_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88266506	88267106	.	+	.	ID=comp60714_c0_seq1.mrna1;geneID=comp60714_c0_seq1.path1;Name=comp60714_c0_seq1;Dir=sensecoverage=90.0;identity=99.8;matches=465;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004714
ChrX	stalkie_big_nohaplotig	exon	88266506	88266638	99	+	.	Parent=comp60714_c0_seq1.mrna1;Target=comp60714_c0_seq1 53 185 +
ChrX	stalkie_big_nohaplotig	exon	88266774	88267106	100	+	.	Parent=comp60714_c0_seq1.mrna1;Target=comp60714_c0_seq1 186 518 +
ChrX	stalkie_big_nohaplotig	CDS	88266572	88266638	.	+	0	Parent=comp60714_c0_seq1.mrna1;Target=comp60714_c0_seq1 119 185 +
ChrX	stalkie_big_nohaplotig	CDS	88266774	88267075	.	+	2	Parent=comp60714_c0_seq1.mrna1;Target=comp60714_c0_seq1 186 487 +
ChrX	gffcl	locus	88273470	88274235	.	-	.	ID=RLOC_00004715;geneIDs=comp63168_c0_seq1.path1;transcripts=comp63168_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88273470	88274235	.	-	.	ID=comp63168_c0_seq1.mrna1;geneID=comp63168_c0_seq1.path1;Name=comp63168_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=606;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004715
ChrX	stalkie_big_nohaplotig	exon	88273470	88273740	100	-	.	Parent=comp63168_c0_seq1.mrna1;Target=comp63168_c0_seq1 1 271 -
ChrX	stalkie_big_nohaplotig	exon	88273810	88274010	100	-	.	Parent=comp63168_c0_seq1.mrna1;Target=comp63168_c0_seq1 272 472 -
ChrX	stalkie_big_nohaplotig	exon	88274102	88274235	100	-	.	Parent=comp63168_c0_seq1.mrna1;Target=comp63168_c0_seq1 473 606 -
ChrX	stalkie_big_nohaplotig	CDS	88273529	88273740	.	-	2	Parent=comp63168_c0_seq1.mrna1;Target=comp63168_c0_seq1 60 271 .
ChrX	stalkie_big_nohaplotig	CDS	88273810	88274010	.	-	2	Parent=comp63168_c0_seq1.mrna1;Target=comp63168_c0_seq1 272 472 .
ChrX	stalkie_big_nohaplotig	CDS	88274102	88274165	.	-	0	Parent=comp63168_c0_seq1.mrna1;Target=comp63168_c0_seq1 473 536 .
ChrX	gffcl	locus	88283079	88283734	.	-	.	ID=RLOC_00004716;geneIDs=comp135149_c1_seq1.path1;transcripts=comp135149_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88283079	88283734	.	-	.	ID=comp135149_c1_seq1.mrna1;geneID=comp135149_c1_seq1.path1;Name=comp135149_c1_seq1;Dir=sensecoverage=96.4;identity=100.0;matches=588;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004716
ChrX	stalkie_big_nohaplotig	exon	88283079	88283567	100	-	.	Parent=comp135149_c1_seq1.mrna1;Target=comp135149_c1_seq1 122 610 +
ChrX	stalkie_big_nohaplotig	exon	88283636	88283734	100	-	.	Parent=comp135149_c1_seq1.mrna1;Target=comp135149_c1_seq1 23 121 +
ChrX	stalkie_big_nohaplotig	CDS	88283209	88283567	.	-	2	Parent=comp135149_c1_seq1.mrna1;Target=comp135149_c1_seq1 122 480 +
ChrX	stalkie_big_nohaplotig	CDS	88283636	88283690	.	-	0	Parent=comp135149_c1_seq1.mrna1;Target=comp135149_c1_seq1 67 121 +
ChrX	gffcl	locus	88297555	88300258	.	-	.	ID=RLOC_00004717;geneIDs=ORF261.path1;transcripts=ORF261.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88297555	88300258	.	-	.	ID=ORF261.mrna1;geneID=ORF261.path1;Name=ORF261;Dir=sensecoverage=100.0;identity=99.0;matches=2204;mismatches=4;indels=18;unknowns=0;locus=RLOC_00004717
ChrX	stalkie_big_nohaplotig	exon	88297555	88298151	100	-	.	Parent=ORF261.mrna1;Target=ORF261 1624 2220 +
ChrX	stalkie_big_nohaplotig	exon	88298215	88298340	100	-	.	Parent=ORF261.mrna1;Target=ORF261 1498 1623 +
ChrX	stalkie_big_nohaplotig	exon	88298398	88298523	100	-	.	Parent=ORF261.mrna1;Target=ORF261 1372 1497 +
ChrX	stalkie_big_nohaplotig	exon	88298585	88298701	86	-	.	Parent=ORF261.mrna1;Target=ORF261 1249 1371 +
ChrX	stalkie_big_nohaplotig	exon	88298756	88298884	100	-	.	Parent=ORF261.mrna1;Target=ORF261 1120 1248 +
ChrX	stalkie_big_nohaplotig	exon	88298944	88299093	100	-	.	Parent=ORF261.mrna1;Target=ORF261 970 1119 +
ChrX	stalkie_big_nohaplotig	exon	88299148	88300025	99	-	.	Parent=ORF261.mrna1;Target=ORF261 92 969 +
ChrX	stalkie_big_nohaplotig	exon	88300168	88300258	100	-	.	Parent=ORF261.mrna1;Target=ORF261 1 91 +
ChrX	stalkie_big_nohaplotig	CDS	88297555	88298151	.	-	0	Parent=ORF261.mrna1;Target=ORF261 1624 2220 +
ChrX	stalkie_big_nohaplotig	CDS	88298215	88298340	.	-	0	Parent=ORF261.mrna1;Target=ORF261 1498 1623 +
ChrX	stalkie_big_nohaplotig	CDS	88298398	88298523	.	-	0	Parent=ORF261.mrna1;Target=ORF261 1372 1497 +
ChrX	stalkie_big_nohaplotig	CDS	88298585	88298701	.	-	0	Parent=ORF261.mrna1;Target=ORF261 1249 1371 +
ChrX	stalkie_big_nohaplotig	CDS	88298756	88298884	.	-	0	Parent=ORF261.mrna1;Target=ORF261 1120 1248 +
ChrX	stalkie_big_nohaplotig	CDS	88298944	88299093	.	-	0	Parent=ORF261.mrna1;Target=ORF261 970 1119 +
ChrX	stalkie_big_nohaplotig	CDS	88299148	88300025	.	-	2	Parent=ORF261.mrna1;Target=ORF261 92 969 +
ChrX	stalkie_big_nohaplotig	CDS	88300168	88300258	.	-	0	Parent=ORF261.mrna1;Target=ORF261 1 91 +
ChrX	gffcl	locus	88305414	88313467	.	-	.	ID=RLOC_00004718;geneIDs=comp148446_c0_seq1.path1;transcripts=comp148446_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88305414	88313467	.	-	.	ID=comp148446_c0_seq1.mrna1;geneID=comp148446_c0_seq1.path1;Name=comp148446_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=623;mismatches=0;indels=0;unknowns=0;Target=comp148446_c0_seq1 230 367 .;locus=RLOC_00004718
ChrX	stalkie_big_nohaplotig	exon	88305414	88305435	100	-	.	Parent=comp148446_c0_seq1.mrna1;Target=comp148446_c0_seq1 1 22 -
ChrX	stalkie_big_nohaplotig	exon	88312608	88312748	100	-	.	Parent=comp148446_c0_seq1.mrna1;Target=comp148446_c0_seq1 23 163 -
ChrX	stalkie_big_nohaplotig	exon	88313008	88313467	100	-	.	Parent=comp148446_c0_seq1.mrna1;Target=comp148446_c0_seq1 164 623 -
ChrX	stalkie_big_nohaplotig	CDS	88313074	88313211	.	-	0	Parent=comp148446_c0_seq1.mrna1
ChrX	gffcl	locus	88321136	88325621	.	.	.	ID=RLOC_00004719;geneIDs=FBgn0032820.1.path1,comp154134_c0_seq1.path1;transcripts=FBgn0032820.1.mrna1,comp154134_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88321136	88325621	.	+	.	ID=FBgn0032820.1.mrna1;geneID=FBgn0032820.1.path1;Name=FBgn0032820.1;Dir=sensecoverage=99.4;identity=100.0;matches=1059;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004719
ChrX	stalkie_big_nohaplotig	exon	88321136	88321181	100	+	.	Parent=FBgn0032820.1.mrna1;Target=FBgn0032820.1 7 52 +
ChrX	stalkie_big_nohaplotig	exon	88324547	88324890	100	+	.	Parent=FBgn0032820.1.mrna1;Target=FBgn0032820.1 53 396 +
ChrX	stalkie_big_nohaplotig	exon	88324953	88325621	100	+	.	Parent=FBgn0032820.1.mrna1;Target=FBgn0032820.1 397 1065 +
ChrX	stalkie_big_nohaplotig	CDS	88321136	88321181	.	+	0	Parent=FBgn0032820.1.mrna1;Target=FBgn0032820.1 7 52 +
ChrX	stalkie_big_nohaplotig	CDS	88324547	88324890	.	+	2	Parent=FBgn0032820.1.mrna1;Target=FBgn0032820.1 53 396 +
ChrX	stalkie_big_nohaplotig	CDS	88324953	88325621	.	+	0	Parent=FBgn0032820.1.mrna1;Target=FBgn0032820.1 397 1065 +
ChrX	stalkie_big_nohaplotig	mRNA	88322601	88324570	.	-	.	ID=comp154134_c0_seq1.mrna1;geneID=comp154134_c0_seq1.path1;Name=comp154134_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1970;mismatches=0;indels=0;unknowns=0;Target=comp154134_c0_seq1 1970 1 .;CDS_Target=comp154134_c0_seq1 1605 1411 .;locus=RLOC_00004719
ChrX	stalkie_big_nohaplotig	exon	88322601	88324570	100	-	.	Parent=comp154134_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	88322966	88323160	.	-	0	Parent=comp154134_c0_seq1.mrna1
ChrX	gffcl	locus	88327420	88329481	.	-	.	ID=RLOC_00004720;geneIDs=FBgn0032819.1.path1;transcripts=FBgn0032819.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88327420	88329481	.	-	.	ID=FBgn0032819.1.mrna1;geneID=FBgn0032819.1.path1;Name=FBgn0032819.1;Dir=sensecoverage=100.0;identity=100.0;matches=1764;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004720
ChrX	stalkie_big_nohaplotig	exon	88327420	88327842	100	-	.	Parent=FBgn0032819.1.mrna1;Target=FBgn0032819.1 1342 1764 +
ChrX	stalkie_big_nohaplotig	exon	88327901	88328041	100	-	.	Parent=FBgn0032819.1.mrna1;Target=FBgn0032819.1 1201 1341 +
ChrX	stalkie_big_nohaplotig	exon	88328098	88328789	100	-	.	Parent=FBgn0032819.1.mrna1;Target=FBgn0032819.1 509 1200 +
ChrX	stalkie_big_nohaplotig	exon	88328856	88329156	100	-	.	Parent=FBgn0032819.1.mrna1;Target=FBgn0032819.1 208 508 +
ChrX	stalkie_big_nohaplotig	exon	88329218	88329368	100	-	.	Parent=FBgn0032819.1.mrna1;Target=FBgn0032819.1 57 207 +
ChrX	stalkie_big_nohaplotig	exon	88329426	88329481	100	-	.	Parent=FBgn0032819.1.mrna1;Target=FBgn0032819.1 1 56 +
ChrX	stalkie_big_nohaplotig	CDS	88327420	88327842	.	-	0	Parent=FBgn0032819.1.mrna1;Target=FBgn0032819.1 1342 1764 +
ChrX	stalkie_big_nohaplotig	CDS	88327901	88328041	.	-	0	Parent=FBgn0032819.1.mrna1;Target=FBgn0032819.1 1201 1341 +
ChrX	stalkie_big_nohaplotig	CDS	88328098	88328789	.	-	2	Parent=FBgn0032819.1.mrna1;Target=FBgn0032819.1 509 1200 +
ChrX	stalkie_big_nohaplotig	CDS	88328856	88329156	.	-	0	Parent=FBgn0032819.1.mrna1;Target=FBgn0032819.1 208 508 +
ChrX	stalkie_big_nohaplotig	CDS	88329218	88329368	.	-	1	Parent=FBgn0032819.1.mrna1;Target=FBgn0032819.1 57 207 +
ChrX	stalkie_big_nohaplotig	CDS	88329426	88329481	.	-	0	Parent=FBgn0032819.1.mrna1;Target=FBgn0032819.1 1 56 +
ChrX	gffcl	locus	88332617	88333401	.	+	.	ID=RLOC_00004721;geneIDs=FBgn0031777.1.path1;transcripts=FBgn0031777.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88332617	88333401	.	+	.	ID=FBgn0031777.1.mrna1;geneID=FBgn0031777.1.path1;Name=FBgn0031777.1;Dir=sensecoverage=100.0;identity=100.0;matches=669;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004721
ChrX	stalkie_big_nohaplotig	exon	88332617	88332775	100	+	.	Parent=FBgn0031777.1.mrna1;Target=FBgn0031777.1 1 159 +
ChrX	stalkie_big_nohaplotig	exon	88332841	88332994	100	+	.	Parent=FBgn0031777.1.mrna1;Target=FBgn0031777.1 160 313 +
ChrX	stalkie_big_nohaplotig	exon	88333046	88333401	100	+	.	Parent=FBgn0031777.1.mrna1;Target=FBgn0031777.1 314 669 +
ChrX	stalkie_big_nohaplotig	CDS	88332617	88332775	.	+	0	Parent=FBgn0031777.1.mrna1;Target=FBgn0031777.1 1 159 +
ChrX	stalkie_big_nohaplotig	CDS	88332841	88332994	.	+	0	Parent=FBgn0031777.1.mrna1;Target=FBgn0031777.1 160 313 +
ChrX	stalkie_big_nohaplotig	CDS	88333046	88333401	.	+	2	Parent=FBgn0031777.1.mrna1;Target=FBgn0031777.1 314 669 +
ChrX	gffcl	locus	88333532	88333936	.	-	.	ID=RLOC_00004722;geneIDs=FBgn0031776.1.path1;transcripts=FBgn0031776.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88333532	88333936	.	-	.	ID=FBgn0031776.1.mrna1;geneID=FBgn0031776.1.path1;Name=FBgn0031776.1;Dir=sensecoverage=99.4;identity=99.7;matches=348;mismatches=0;indels=1;unknowns=0;Target=FBgn0031776.1 3 65 +;locus=RLOC_00004722
ChrX	stalkie_big_nohaplotig	exon	88333532	88333733	100	-	.	Parent=FBgn0031776.1.mrna1;Target=FBgn0031776.1 150 351 +
ChrX	stalkie_big_nohaplotig	exon	88333791	88333936	99	-	.	Parent=FBgn0031776.1.mrna1;Target=FBgn0031776.1 3 149 +
ChrX	stalkie_big_nohaplotig	CDS	88333875	88333936	.	-	0	Parent=FBgn0031776.1.mrna1
ChrX	gffcl	locus	88335502	88337027	.	+	.	ID=RLOC_00004723;geneIDs=FBgn0031309.1.path1;transcripts=FBgn0031309.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88335502	88337027	.	+	.	ID=FBgn0031309.1.mrna1;geneID=FBgn0031309.1.path1;Name=FBgn0031309.1;Dir=sensecoverage=100.0;identity=100.0;matches=882;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004723
ChrX	stalkie_big_nohaplotig	exon	88335502	88335526	100	+	.	Parent=FBgn0031309.1.mrna1;Target=FBgn0031309.1 1 25 +
ChrX	stalkie_big_nohaplotig	exon	88335603	88335786	100	+	.	Parent=FBgn0031309.1.mrna1;Target=FBgn0031309.1 26 209 +
ChrX	stalkie_big_nohaplotig	exon	88335854	88336052	100	+	.	Parent=FBgn0031309.1.mrna1;Target=FBgn0031309.1 210 408 +
ChrX	stalkie_big_nohaplotig	exon	88336110	88336491	100	+	.	Parent=FBgn0031309.1.mrna1;Target=FBgn0031309.1 409 790 +
ChrX	stalkie_big_nohaplotig	exon	88336549	88336585	100	+	.	Parent=FBgn0031309.1.mrna1;Target=FBgn0031309.1 791 827 +
ChrX	stalkie_big_nohaplotig	exon	88336973	88337027	100	+	.	Parent=FBgn0031309.1.mrna1;Target=FBgn0031309.1 828 882 +
ChrX	stalkie_big_nohaplotig	CDS	88335502	88335526	.	+	0	Parent=FBgn0031309.1.mrna1;Target=FBgn0031309.1 1 25 +
ChrX	stalkie_big_nohaplotig	CDS	88335603	88335786	.	+	2	Parent=FBgn0031309.1.mrna1;Target=FBgn0031309.1 26 209 +
ChrX	stalkie_big_nohaplotig	CDS	88335854	88336052	.	+	1	Parent=FBgn0031309.1.mrna1;Target=FBgn0031309.1 210 408 +
ChrX	stalkie_big_nohaplotig	CDS	88336110	88336491	.	+	0	Parent=FBgn0031309.1.mrna1;Target=FBgn0031309.1 409 790 +
ChrX	stalkie_big_nohaplotig	CDS	88336549	88336585	.	+	2	Parent=FBgn0031309.1.mrna1;Target=FBgn0031309.1 791 827 +
ChrX	stalkie_big_nohaplotig	CDS	88336973	88337027	.	+	1	Parent=FBgn0031309.1.mrna1;Target=FBgn0031309.1 828 882 +
ChrX	gffcl	locus	88343167	88348494	.	-	.	ID=RLOC_00004725;geneIDs=FBgn0032752.1.path1;transcripts=FBgn0032752.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88343167	88348494	.	-	.	ID=FBgn0032752.1.mrna1;geneID=FBgn0032752.1.path1;Name=FBgn0032752.1;Dir=sensecoverage=100.0;identity=100.0;matches=3024;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004725
ChrX	stalkie_big_nohaplotig	exon	88343167	88344621	100	-	.	Parent=FBgn0032752.1.mrna1;Target=FBgn0032752.1 1570 3024 +
ChrX	stalkie_big_nohaplotig	exon	88344684	88344984	100	-	.	Parent=FBgn0032752.1.mrna1;Target=FBgn0032752.1 1269 1569 +
ChrX	stalkie_big_nohaplotig	exon	88345205	88345452	100	-	.	Parent=FBgn0032752.1.mrna1;Target=FBgn0032752.1 1021 1268 +
ChrX	stalkie_big_nohaplotig	exon	88345513	88345603	100	-	.	Parent=FBgn0032752.1.mrna1;Target=FBgn0032752.1 930 1020 +
ChrX	stalkie_big_nohaplotig	exon	88345661	88345783	100	-	.	Parent=FBgn0032752.1.mrna1;Target=FBgn0032752.1 807 929 +
ChrX	stalkie_big_nohaplotig	exon	88347551	88347717	100	-	.	Parent=FBgn0032752.1.mrna1;Target=FBgn0032752.1 640 806 +
ChrX	stalkie_big_nohaplotig	exon	88347779	88347859	100	-	.	Parent=FBgn0032752.1.mrna1;Target=FBgn0032752.1 559 639 +
ChrX	stalkie_big_nohaplotig	exon	88347937	88348494	100	-	.	Parent=FBgn0032752.1.mrna1;Target=FBgn0032752.1 1 558 +
ChrX	stalkie_big_nohaplotig	CDS	88343167	88344621	.	-	0	Parent=FBgn0032752.1.mrna1;Target=FBgn0032752.1 1570 3024 +
ChrX	stalkie_big_nohaplotig	CDS	88344684	88344984	.	-	1	Parent=FBgn0032752.1.mrna1;Target=FBgn0032752.1 1269 1569 +
ChrX	stalkie_big_nohaplotig	CDS	88345205	88345452	.	-	0	Parent=FBgn0032752.1.mrna1;Target=FBgn0032752.1 1021 1268 +
ChrX	stalkie_big_nohaplotig	CDS	88345513	88345603	.	-	1	Parent=FBgn0032752.1.mrna1;Target=FBgn0032752.1 930 1020 +
ChrX	stalkie_big_nohaplotig	CDS	88345661	88345783	.	-	1	Parent=FBgn0032752.1.mrna1;Target=FBgn0032752.1 807 929 +
ChrX	stalkie_big_nohaplotig	CDS	88347551	88347717	.	-	0	Parent=FBgn0032752.1.mrna1;Target=FBgn0032752.1 640 806 +
ChrX	stalkie_big_nohaplotig	CDS	88347779	88347859	.	-	0	Parent=FBgn0032752.1.mrna1;Target=FBgn0032752.1 559 639 +
ChrX	stalkie_big_nohaplotig	CDS	88347937	88348494	.	-	0	Parent=FBgn0032752.1.mrna1;Target=FBgn0032752.1 1 558 +
ChrX	gffcl	locus	88358704	88363987	.	-	.	ID=RLOC_00004726;geneIDs=FBgn0032753.1.path1;transcripts=FBgn0032753.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88358704	88363987	.	-	.	ID=FBgn0032753.1.mrna1;geneID=FBgn0032753.1.path1;Name=FBgn0032753.1;Dir=sensecoverage=100.0;identity=100.0;matches=1329;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004726
ChrX	stalkie_big_nohaplotig	exon	88358704	88358814	100	-	.	Parent=FBgn0032753.1.mrna1;Target=FBgn0032753.1 1219 1329 +
ChrX	stalkie_big_nohaplotig	exon	88358880	88359181	100	-	.	Parent=FBgn0032753.1.mrna1;Target=FBgn0032753.1 917 1218 +
ChrX	stalkie_big_nohaplotig	exon	88361032	88361216	100	-	.	Parent=FBgn0032753.1.mrna1;Target=FBgn0032753.1 732 916 +
ChrX	stalkie_big_nohaplotig	exon	88361287	88361395	100	-	.	Parent=FBgn0032753.1.mrna1;Target=FBgn0032753.1 623 731 +
ChrX	stalkie_big_nohaplotig	exon	88361453	88361839	100	-	.	Parent=FBgn0032753.1.mrna1;Target=FBgn0032753.1 236 622 +
ChrX	stalkie_big_nohaplotig	exon	88363753	88363987	100	-	.	Parent=FBgn0032753.1.mrna1;Target=FBgn0032753.1 1 235 +
ChrX	stalkie_big_nohaplotig	CDS	88358704	88358814	.	-	0	Parent=FBgn0032753.1.mrna1;Target=FBgn0032753.1 1219 1329 +
ChrX	stalkie_big_nohaplotig	CDS	88358880	88359181	.	-	2	Parent=FBgn0032753.1.mrna1;Target=FBgn0032753.1 917 1218 +
ChrX	stalkie_big_nohaplotig	CDS	88361032	88361216	.	-	1	Parent=FBgn0032753.1.mrna1;Target=FBgn0032753.1 732 916 +
ChrX	stalkie_big_nohaplotig	CDS	88361287	88361395	.	-	2	Parent=FBgn0032753.1.mrna1;Target=FBgn0032753.1 623 731 +
ChrX	stalkie_big_nohaplotig	CDS	88361453	88361839	.	-	2	Parent=FBgn0032753.1.mrna1;Target=FBgn0032753.1 236 622 +
ChrX	stalkie_big_nohaplotig	CDS	88363753	88363987	.	-	0	Parent=FBgn0032753.1.mrna1;Target=FBgn0032753.1 1 235 +
ChrX	gffcl	locus	88376776	88390426	.	-	.	ID=RLOC_00004727;geneIDs=FBgn0032482.1.path1,comp151284_c1_seq1.path1;transcripts=comp151284_c1_seq1.mrna1,FBgn0032482.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88376776	88390426	.	-	.	ID=comp151284_c1_seq1.mrna1;geneID=comp151284_c1_seq1.path1;Name=comp151284_c1_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=2375;mismatches=2;indels=0;unknowns=0;locus=RLOC_00004727
ChrX	stalkie_big_nohaplotig	exon	88376776	88377816	99	-	.	Parent=comp151284_c1_seq1.mrna1;Target=comp151284_c1_seq1 1 1041 -
ChrX	stalkie_big_nohaplotig	exon	88377887	88378072	100	-	.	Parent=comp151284_c1_seq1.mrna1;Target=comp151284_c1_seq1 1042 1227 -
ChrX	stalkie_big_nohaplotig	exon	88379829	88379956	100	-	.	Parent=comp151284_c1_seq1.mrna1;Target=comp151284_c1_seq1 1228 1355 -
ChrX	stalkie_big_nohaplotig	exon	88380043	88380066	100	-	.	Parent=comp151284_c1_seq1.mrna1;Target=comp151284_c1_seq1 1356 1379 -
ChrX	stalkie_big_nohaplotig	exon	88380203	88380315	100	-	.	Parent=comp151284_c1_seq1.mrna1;Target=comp151284_c1_seq1 1380 1492 -
ChrX	stalkie_big_nohaplotig	exon	88380371	88380437	100	-	.	Parent=comp151284_c1_seq1.mrna1;Target=comp151284_c1_seq1 1493 1559 -
ChrX	stalkie_big_nohaplotig	exon	88380504	88380754	99	-	.	Parent=comp151284_c1_seq1.mrna1;Target=comp151284_c1_seq1 1560 1810 -
ChrX	stalkie_big_nohaplotig	exon	88389860	88390426	100	-	.	Parent=comp151284_c1_seq1.mrna1;Target=comp151284_c1_seq1 1811 2377 -
ChrX	stalkie_big_nohaplotig	CDS	88377499	88377816	.	-	0	Parent=comp151284_c1_seq1.mrna1;Target=comp151284_c1_seq1 724 1041 .
ChrX	stalkie_big_nohaplotig	CDS	88377887	88378072	.	-	0	Parent=comp151284_c1_seq1.mrna1;Target=comp151284_c1_seq1 1042 1227 .
ChrX	stalkie_big_nohaplotig	CDS	88379829	88379956	.	-	2	Parent=comp151284_c1_seq1.mrna1;Target=comp151284_c1_seq1 1228 1355 .
ChrX	stalkie_big_nohaplotig	CDS	88380043	88380066	.	-	2	Parent=comp151284_c1_seq1.mrna1;Target=comp151284_c1_seq1 1356 1379 .
ChrX	stalkie_big_nohaplotig	CDS	88380203	88380315	.	-	1	Parent=comp151284_c1_seq1.mrna1;Target=comp151284_c1_seq1 1380 1492 .
ChrX	stalkie_big_nohaplotig	CDS	88380371	88380437	.	-	2	Parent=comp151284_c1_seq1.mrna1;Target=comp151284_c1_seq1 1493 1559 .
ChrX	stalkie_big_nohaplotig	CDS	88380504	88380754	.	-	1	Parent=comp151284_c1_seq1.mrna1;Target=comp151284_c1_seq1 1560 1810 .
ChrX	stalkie_big_nohaplotig	CDS	88389860	88389978	.	-	0	Parent=comp151284_c1_seq1.mrna1;Target=comp151284_c1_seq1 1811 1929 .
ChrX	stalkie_big_nohaplotig	mRNA	88377502	88390023	.	-	.	ID=FBgn0032482.1.mrna1;geneID=FBgn0032482.1.path1;Name=FBgn0032482.1;Dir=sensecoverage=100.0;identity=99.9;matches=1223;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004727
ChrX	stalkie_big_nohaplotig	exon	88377502	88377816	100	-	.	Parent=FBgn0032482.1.mrna1;Target=FBgn0032482.1 910 1224 +
ChrX	stalkie_big_nohaplotig	exon	88377887	88378072	100	-	.	Parent=FBgn0032482.1.mrna1;Target=FBgn0032482.1 724 909 +
ChrX	stalkie_big_nohaplotig	exon	88379829	88379956	100	-	.	Parent=FBgn0032482.1.mrna1;Target=FBgn0032482.1 596 723 +
ChrX	stalkie_big_nohaplotig	exon	88380203	88380315	100	-	.	Parent=FBgn0032482.1.mrna1;Target=FBgn0032482.1 483 595 +
ChrX	stalkie_big_nohaplotig	exon	88380371	88380437	100	-	.	Parent=FBgn0032482.1.mrna1;Target=FBgn0032482.1 416 482 +
ChrX	stalkie_big_nohaplotig	exon	88380504	88380754	99	-	.	Parent=FBgn0032482.1.mrna1;Target=FBgn0032482.1 165 415 +
ChrX	stalkie_big_nohaplotig	exon	88389860	88390023	100	-	.	Parent=FBgn0032482.1.mrna1;Target=FBgn0032482.1 1 164 +
ChrX	stalkie_big_nohaplotig	CDS	88377502	88377816	.	-	0	Parent=FBgn0032482.1.mrna1;Target=FBgn0032482.1 910 1224 +
ChrX	stalkie_big_nohaplotig	CDS	88377887	88378072	.	-	0	Parent=FBgn0032482.1.mrna1;Target=FBgn0032482.1 724 909 +
ChrX	stalkie_big_nohaplotig	CDS	88379829	88379956	.	-	2	Parent=FBgn0032482.1.mrna1;Target=FBgn0032482.1 596 723 +
ChrX	stalkie_big_nohaplotig	CDS	88380203	88380315	.	-	1	Parent=FBgn0032482.1.mrna1;Target=FBgn0032482.1 483 595 +
ChrX	stalkie_big_nohaplotig	CDS	88380371	88380437	.	-	2	Parent=FBgn0032482.1.mrna1;Target=FBgn0032482.1 416 482 +
ChrX	stalkie_big_nohaplotig	CDS	88380504	88380754	.	-	1	Parent=FBgn0032482.1.mrna1;Target=FBgn0032482.1 165 415 +
ChrX	stalkie_big_nohaplotig	CDS	88389860	88390023	.	-	0	Parent=FBgn0032482.1.mrna1;Target=FBgn0032482.1 1 164 +
ChrX	gffcl	locus	88378324	88379379	.	+	.	ID=RLOC_00004728;geneIDs=comp144734_c0_seq1.path1;transcripts=comp144734_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88378324	88379379	.	+	.	ID=comp144734_c0_seq1.mrna1;geneID=comp144734_c0_seq1.path1;Name=comp144734_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1055;mismatches=1;indels=2;unknowns=0;Target=comp144734_c0_seq1 1058 1 .;CDS_Target=comp144734_c0_seq1 912 778 .;locus=RLOC_00004728
ChrX	stalkie_big_nohaplotig	exon	88378324	88379379	99	+	.	Parent=comp144734_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	88379101	88379234	.	+	0	Parent=comp144734_c0_seq1.mrna1
ChrX	gffcl	locus	88406831	88408699	.	+	.	ID=RLOC_00004729;geneIDs=FBgn0024947.1.path1;transcripts=FBgn0024947.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88406831	88408699	.	+	.	ID=FBgn0024947.1.mrna1;geneID=FBgn0024947.1.path1;Name=FBgn0024947.1;Dir=sensecoverage=100.0;identity=100.0;matches=1389;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004729
ChrX	stalkie_big_nohaplotig	exon	88406831	88406857	100	+	.	Parent=FBgn0024947.1.mrna1;Target=FBgn0024947.1 1 27 +
ChrX	stalkie_big_nohaplotig	exon	88406928	88407072	100	+	.	Parent=FBgn0024947.1.mrna1;Target=FBgn0024947.1 28 172 +
ChrX	stalkie_big_nohaplotig	exon	88407134	88407277	100	+	.	Parent=FBgn0024947.1.mrna1;Target=FBgn0024947.1 173 316 +
ChrX	stalkie_big_nohaplotig	exon	88407427	88407506	100	+	.	Parent=FBgn0024947.1.mrna1;Target=FBgn0024947.1 317 396 +
ChrX	stalkie_big_nohaplotig	exon	88407568	88408130	100	+	.	Parent=FBgn0024947.1.mrna1;Target=FBgn0024947.1 397 959 +
ChrX	stalkie_big_nohaplotig	exon	88408201	88408543	100	+	.	Parent=FBgn0024947.1.mrna1;Target=FBgn0024947.1 960 1302 +
ChrX	stalkie_big_nohaplotig	exon	88408613	88408699	100	+	.	Parent=FBgn0024947.1.mrna1;Target=FBgn0024947.1 1303 1389 +
ChrX	stalkie_big_nohaplotig	CDS	88406831	88406857	.	+	0	Parent=FBgn0024947.1.mrna1;Target=FBgn0024947.1 1 27 +
ChrX	stalkie_big_nohaplotig	CDS	88406928	88407072	.	+	0	Parent=FBgn0024947.1.mrna1;Target=FBgn0024947.1 28 172 +
ChrX	stalkie_big_nohaplotig	CDS	88407134	88407277	.	+	2	Parent=FBgn0024947.1.mrna1;Target=FBgn0024947.1 173 316 +
ChrX	stalkie_big_nohaplotig	CDS	88407427	88407506	.	+	2	Parent=FBgn0024947.1.mrna1;Target=FBgn0024947.1 317 396 +
ChrX	stalkie_big_nohaplotig	CDS	88407568	88408130	.	+	0	Parent=FBgn0024947.1.mrna1;Target=FBgn0024947.1 397 959 +
ChrX	stalkie_big_nohaplotig	CDS	88408201	88408543	.	+	1	Parent=FBgn0024947.1.mrna1;Target=FBgn0024947.1 960 1302 +
ChrX	stalkie_big_nohaplotig	CDS	88408613	88408699	.	+	0	Parent=FBgn0024947.1.mrna1;Target=FBgn0024947.1 1303 1389 +
ChrX	gffcl	locus	88410831	88411921	.	-	.	ID=RLOC_00004730;geneIDs=comp70713_c0_seq1.path1;transcripts=comp70713_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88410831	88411921	.	-	.	ID=comp70713_c0_seq1.mrna1;geneID=comp70713_c0_seq1.path1;Name=comp70713_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1091;mismatches=0;indels=0;unknowns=0;Target=comp70713_c0_seq1 1091 1 .;CDS_Target=comp70713_c0_seq1 1045 782 .;locus=RLOC_00004730
ChrX	stalkie_big_nohaplotig	exon	88410831	88411921	100	-	.	Parent=comp70713_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	88410877	88411140	.	-	0	Parent=comp70713_c0_seq1.mrna1
ChrX	gffcl	locus	88412291	88419449	.	.	.	ID=RLOC_00004731;geneIDs=FBgn0000053.1.path1,comp52178_c0_seq1.path1;transcripts=FBgn0000053.1.mrna1,comp52178_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88412291	88419449	.	-	.	ID=FBgn0000053.1.mrna1;geneID=FBgn0000053.1.path1;Name=FBgn0000053.1;Dir=sensecoverage=100.0;identity=100.0;matches=4092;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004731
ChrX	stalkie_big_nohaplotig	exon	88412291	88412470	100	-	.	Parent=FBgn0000053.1.mrna1;Target=FBgn0000053.1 3913 4092 +
ChrX	stalkie_big_nohaplotig	exon	88412526	88413631	100	-	.	Parent=FBgn0000053.1.mrna1;Target=FBgn0000053.1 2807 3912 +
ChrX	stalkie_big_nohaplotig	exon	88413719	88414513	100	-	.	Parent=FBgn0000053.1.mrna1;Target=FBgn0000053.1 2012 2806 +
ChrX	stalkie_big_nohaplotig	exon	88414575	88414826	100	-	.	Parent=FBgn0000053.1.mrna1;Target=FBgn0000053.1 1760 2011 +
ChrX	stalkie_big_nohaplotig	exon	88415033	88415291	100	-	.	Parent=FBgn0000053.1.mrna1;Target=FBgn0000053.1 1501 1759 +
ChrX	stalkie_big_nohaplotig	exon	88415367	88415538	100	-	.	Parent=FBgn0000053.1.mrna1;Target=FBgn0000053.1 1329 1500 +
ChrX	stalkie_big_nohaplotig	exon	88415696	88415918	100	-	.	Parent=FBgn0000053.1.mrna1;Target=FBgn0000053.1 1106 1328 +
ChrX	stalkie_big_nohaplotig	exon	88415991	88416640	100	-	.	Parent=FBgn0000053.1.mrna1;Target=FBgn0000053.1 456 1105 +
ChrX	stalkie_big_nohaplotig	exon	88416703	88416950	100	-	.	Parent=FBgn0000053.1.mrna1;Target=FBgn0000053.1 208 455 +
ChrX	stalkie_big_nohaplotig	exon	88419243	88419449	100	-	.	Parent=FBgn0000053.1.mrna1;Target=FBgn0000053.1 1 207 +
ChrX	stalkie_big_nohaplotig	CDS	88412291	88412470	.	-	0	Parent=FBgn0000053.1.mrna1;Target=FBgn0000053.1 3913 4092 +
ChrX	stalkie_big_nohaplotig	CDS	88412526	88413631	.	-	2	Parent=FBgn0000053.1.mrna1;Target=FBgn0000053.1 2807 3912 +
ChrX	stalkie_big_nohaplotig	CDS	88413719	88414513	.	-	2	Parent=FBgn0000053.1.mrna1;Target=FBgn0000053.1 2012 2806 +
ChrX	stalkie_big_nohaplotig	CDS	88414575	88414826	.	-	2	Parent=FBgn0000053.1.mrna1;Target=FBgn0000053.1 1760 2011 +
ChrX	stalkie_big_nohaplotig	CDS	88415033	88415291	.	-	0	Parent=FBgn0000053.1.mrna1;Target=FBgn0000053.1 1501 1759 +
ChrX	stalkie_big_nohaplotig	CDS	88415367	88415538	.	-	1	Parent=FBgn0000053.1.mrna1;Target=FBgn0000053.1 1329 1500 +
ChrX	stalkie_big_nohaplotig	CDS	88415696	88415918	.	-	2	Parent=FBgn0000053.1.mrna1;Target=FBgn0000053.1 1106 1328 +
ChrX	stalkie_big_nohaplotig	CDS	88415991	88416640	.	-	1	Parent=FBgn0000053.1.mrna1;Target=FBgn0000053.1 456 1105 +
ChrX	stalkie_big_nohaplotig	CDS	88416703	88416950	.	-	0	Parent=FBgn0000053.1.mrna1;Target=FBgn0000053.1 208 455 +
ChrX	stalkie_big_nohaplotig	CDS	88419243	88419449	.	-	0	Parent=FBgn0000053.1.mrna1;Target=FBgn0000053.1 1 207 +
ChrX	stalkie_big_nohaplotig	mRNA	88415515	88415719	.	+	.	ID=comp52178_c0_seq1.mrna1;geneID=comp52178_c0_seq1.path1;Name=comp52178_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=205;mismatches=0;indels=0;unknowns=0;Target=comp52178_c0_seq1 205 1 .;CDS_Target=comp52178_c0_seq1 152 3 .;locus=RLOC_00004731
ChrX	stalkie_big_nohaplotig	exon	88415515	88415719	100	+	.	Parent=comp52178_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	88415517	88415666	.	+	0	Parent=comp52178_c0_seq1.mrna1
ChrX	gffcl	locus	88417393	88418201	.	-	.	ID=RLOC_00004732;geneIDs=comp1830269_c0_seq1.path1;transcripts=comp1830269_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88417393	88418201	.	-	.	ID=comp1830269_c0_seq1.mrna1;geneID=comp1830269_c0_seq1.path1;Name=comp1830269_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=809;mismatches=0;indels=0;unknowns=0;Target=comp1830269_c0_seq1 809 1 .;CDS_Target=comp1830269_c0_seq1 475 371 .;locus=RLOC_00004732
ChrX	stalkie_big_nohaplotig	exon	88417393	88418201	100	-	.	Parent=comp1830269_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	88417727	88417831	.	-	0	Parent=comp1830269_c0_seq1.mrna1
ChrX	gffcl	locus	88418512	88418967	.	-	.	ID=RLOC_00004733;geneIDs=comp112910_c0_seq1.path1;transcripts=comp112910_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88418512	88418967	.	-	.	ID=comp112910_c0_seq1.mrna1;geneID=comp112910_c0_seq1.path1;Name=comp112910_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=454;mismatches=2;indels=0;unknowns=0;Target=comp112910_c0_seq1 456 1 .;CDS_Target=comp112910_c0_seq1 345 226 .;locus=RLOC_00004733
ChrX	stalkie_big_nohaplotig	exon	88418512	88418967	99	-	.	Parent=comp112910_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	88418623	88418742	.	-	0	Parent=comp112910_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88432192	88633122	.	+	.	ID=comp161386_c0_seq2.mrna1;geneID=comp161386_c0_seq2.path1;Name=comp161386_c0_seq2;Dir=antisensecoverage=30.3;identity=88.4;matches=757;mismatches=63;indels=36;unknowns=0;Target=comp161386_c0_seq2 1395 1520 .;locus=RLOC_00004734
ChrX	stalkie_big_nohaplotig	exon	88432192	88432200	100	+	.	Parent=comp161386_c0_seq2.mrna1;Target=comp161386_c0_seq2 1854 1862 -
ChrX	stalkie_big_nohaplotig	exon	88436812	88436826	73	+	.	Parent=comp161386_c0_seq2.mrna1;Target=comp161386_c0_seq2 1842 1853 -
ChrX	stalkie_big_nohaplotig	exon	88439551	88439567	88	+	.	Parent=comp161386_c0_seq2.mrna1;Target=comp161386_c0_seq2 1825 1841 -
ChrX	stalkie_big_nohaplotig	exon	88478995	88478997	100	+	.	Parent=comp161386_c0_seq2.mrna1;Target=comp161386_c0_seq2 1822 1824 -
ChrX	stalkie_big_nohaplotig	exon	88485478	88485479	100	+	.	Parent=comp161386_c0_seq2.mrna1;Target=comp161386_c0_seq2 1820 1821 -
ChrX	stalkie_big_nohaplotig	exon	88485877	88485880	100	+	.	Parent=comp161386_c0_seq2.mrna1;Target=comp161386_c0_seq2 1816 1819 -
ChrX	stalkie_big_nohaplotig	exon	88488144	88488148	100	+	.	Parent=comp161386_c0_seq2.mrna1;Target=comp161386_c0_seq2 1811 1815 -
ChrX	stalkie_big_nohaplotig	exon	88500736	88500782	54	+	.	Parent=comp161386_c0_seq2.mrna1;Target=comp161386_c0_seq2 1771 1810 -
ChrX	stalkie_big_nohaplotig	exon	88526541	88526548	100	+	.	Parent=comp161386_c0_seq2.mrna1;Target=comp161386_c0_seq2 1763 1770 -
ChrX	stalkie_big_nohaplotig	exon	88531704	88531708	100	+	.	Parent=comp161386_c0_seq2.mrna1;Target=comp161386_c0_seq2 1758 1762 -
ChrX	stalkie_big_nohaplotig	exon	88560903	88560910	100	+	.	Parent=comp161386_c0_seq2.mrna1;Target=comp161386_c0_seq2 1750 1757 -
ChrX	stalkie_big_nohaplotig	exon	88574731	88574735	100	+	.	Parent=comp161386_c0_seq2.mrna1;Target=comp161386_c0_seq2 1745 1749 -
ChrX	stalkie_big_nohaplotig	exon	88575340	88575347	100	+	.	Parent=comp161386_c0_seq2.mrna1;Target=comp161386_c0_seq2 1726 1733 -
ChrX	stalkie_big_nohaplotig	exon	88599351	88599353	100	+	.	Parent=comp161386_c0_seq2.mrna1;Target=comp161386_c0_seq2 1723 1725 -
ChrX	stalkie_big_nohaplotig	exon	88605545	88605553	100	+	.	Parent=comp161386_c0_seq2.mrna1;Target=comp161386_c0_seq2 1714 1722 -
ChrX	stalkie_big_nohaplotig	exon	88609116	88609122	100	+	.	Parent=comp161386_c0_seq2.mrna1;Target=comp161386_c0_seq2 1707 1713 -
ChrX	stalkie_big_nohaplotig	exon	88615735	88615742	100	+	.	Parent=comp161386_c0_seq2.mrna1;Target=comp161386_c0_seq2 1699 1706 -
ChrX	stalkie_big_nohaplotig	exon	88619767	88619768	0	+	.	Parent=comp161386_c0_seq2.mrna1;Target=comp161386_c0_seq2 1697 1698 -
ChrX	stalkie_big_nohaplotig	exon	88623167	88623170	100	+	.	Parent=comp161386_c0_seq2.mrna1;Target=comp161386_c0_seq2 1693 1696 -
ChrX	stalkie_big_nohaplotig	exon	88629558	88629564	100	+	.	Parent=comp161386_c0_seq2.mrna1;Target=comp161386_c0_seq2 1686 1692 -
ChrX	stalkie_big_nohaplotig	exon	88631158	88631160	100	+	.	Parent=comp161386_c0_seq2.mrna1;Target=comp161386_c0_seq2 1683 1685 -
ChrX	stalkie_big_nohaplotig	exon	88632469	88633122	89	+	.	Parent=comp161386_c0_seq2.mrna1;Target=comp161386_c0_seq2 1004 1677 -
ChrX	stalkie_big_nohaplotig	CDS	88632605	88632732	.	+	0	Parent=comp161386_c0_seq2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88435265	88440369	.	-	.	ID=FBgn0051908.1.mrna1;geneID=FBgn0051908.1.path1;Name=FBgn0051908.1;Dir=sensecoverage=100.0;identity=100.0;matches=1005;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004734
ChrX	stalkie_big_nohaplotig	exon	88435265	88435613	100	-	.	Parent=FBgn0051908.1.mrna1;Target=FBgn0051908.1 657 1005 +
ChrX	stalkie_big_nohaplotig	exon	88439658	88440130	100	-	.	Parent=FBgn0051908.1.mrna1;Target=FBgn0051908.1 184 656 +
ChrX	stalkie_big_nohaplotig	exon	88440187	88440369	100	-	.	Parent=FBgn0051908.1.mrna1;Target=FBgn0051908.1 1 183 +
ChrX	stalkie_big_nohaplotig	CDS	88435265	88435613	.	-	1	Parent=FBgn0051908.1.mrna1;Target=FBgn0051908.1 657 1005 +
ChrX	stalkie_big_nohaplotig	CDS	88439658	88440130	.	-	0	Parent=FBgn0051908.1.mrna1;Target=FBgn0051908.1 184 656 +
ChrX	stalkie_big_nohaplotig	CDS	88440187	88440369	.	-	0	Parent=FBgn0051908.1.mrna1;Target=FBgn0051908.1 1 183 +
ChrX	stalkie_big_nohaplotig	mRNA	88439424	88439681	.	+	.	ID=comp146579_c0_seq1.mrna1;geneID=comp146579_c0_seq1.path1;Name=comp146579_c0_seq1;Dir=indeterminatecoverage=63.2;identity=100.0;matches=258;mismatches=0;indels=0;unknowns=0;Target=comp146579_c0_seq1 408 151 .;CDS_Target=comp146579_c0_seq1 359 153 .;locus=RLOC_00004734
ChrX	stalkie_big_nohaplotig	exon	88439424	88439681	100	+	.	Parent=comp146579_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	88439426	88439632	.	+	0	Parent=comp146579_c0_seq1.mrna1
ChrX	gffcl	locus	88435799	88437383	.	-	.	ID=RLOC_00004735;geneIDs=comp160780_c0_seq1.path1;transcripts=comp160780_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88435799	88437383	.	-	.	ID=comp160780_c0_seq1.mrna1;geneID=comp160780_c0_seq1.path1;Name=comp160780_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1536;mismatches=1;indels=0;unknowns=0;Target=comp160780_c0_seq1 1135 1004 .;locus=RLOC_00004735
ChrX	stalkie_big_nohaplotig	exon	88435799	88436014	99	-	.	Parent=comp160780_c0_seq1.mrna1;Target=comp160780_c0_seq1 1539 1324 .
ChrX	stalkie_big_nohaplotig	exon	88436063	88437383	100	-	.	Parent=comp160780_c0_seq1.mrna1;Target=comp160780_c0_seq1 1323 3 .
ChrX	stalkie_big_nohaplotig	CDS	88436251	88436382	.	-	0	Parent=comp160780_c0_seq1.mrna1
ChrX	gffcl	locus	88444086	88445175	.	+	.	ID=RLOC_00004736;geneIDs=FBgn0028970.1.path1;transcripts=FBgn0028970.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88444086	88445175	.	+	.	ID=FBgn0028970.1.mrna1;geneID=FBgn0028970.1.path1;Name=FBgn0028970.1;Dir=sensecoverage=100.0;identity=100.0;matches=1035;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004736
ChrX	stalkie_big_nohaplotig	exon	88444086	88444689	100	+	.	Parent=FBgn0028970.1.mrna1;Target=FBgn0028970.1 1 604 +
ChrX	stalkie_big_nohaplotig	exon	88444745	88445175	100	+	.	Parent=FBgn0028970.1.mrna1;Target=FBgn0028970.1 605 1035 +
ChrX	stalkie_big_nohaplotig	CDS	88444086	88444689	.	+	0	Parent=FBgn0028970.1.mrna1;Target=FBgn0028970.1 1 604 +
ChrX	stalkie_big_nohaplotig	CDS	88444745	88445175	.	+	2	Parent=FBgn0028970.1.mrna1;Target=FBgn0028970.1 605 1035 +
ChrX	gffcl	locus	88459457	88460460	.	-	.	ID=RLOC_00004738;geneIDs=comp135632_c0_seq1.path1;transcripts=comp135632_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88459457	88460460	.	-	.	ID=comp135632_c0_seq1.mrna1;geneID=comp135632_c0_seq1.path1;Name=comp135632_c0_seq1;Dir=indeterminatecoverage=98.2;identity=100.0;matches=1004;mismatches=0;indels=0;unknowns=0;Target=comp135632_c0_seq1 1022 19 .;CDS_Target=comp135632_c0_seq1 753 667 .;locus=RLOC_00004738
ChrX	stalkie_big_nohaplotig	exon	88459457	88460460	100	-	.	Parent=comp135632_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	88459726	88459812	.	-	0	Parent=comp135632_c0_seq1.mrna1
ChrX	gffcl	locus	88505234	88526291	.	+	.	ID=RLOC_00004739;geneIDs=FBgn0027600.1.path1;transcripts=FBgn0027600.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88505234	88526291	.	+	.	ID=FBgn0027600.1.mrna1;geneID=FBgn0027600.1.path1;Name=FBgn0027600.1;Dir=sensecoverage=98.2;identity=99.9;matches=965;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004739
ChrX	stalkie_big_nohaplotig	exon	88505234	88505285	98	+	.	Parent=FBgn0027600.1.mrna1;Target=FBgn0027600.1 19 70 +
ChrX	stalkie_big_nohaplotig	exon	88505494	88505559	100	+	.	Parent=FBgn0027600.1.mrna1;Target=FBgn0027600.1 71 136 +
ChrX	stalkie_big_nohaplotig	exon	88519620	88519806	100	+	.	Parent=FBgn0027600.1.mrna1;Target=FBgn0027600.1 137 323 +
ChrX	stalkie_big_nohaplotig	exon	88520546	88520664	100	+	.	Parent=FBgn0027600.1.mrna1;Target=FBgn0027600.1 324 442 +
ChrX	stalkie_big_nohaplotig	exon	88525686	88526082	100	+	.	Parent=FBgn0027600.1.mrna1;Target=FBgn0027600.1 443 839 +
ChrX	stalkie_big_nohaplotig	exon	88526147	88526291	100	+	.	Parent=FBgn0027600.1.mrna1;Target=FBgn0027600.1 840 984 +
ChrX	stalkie_big_nohaplotig	CDS	88505234	88505285	.	+	0	Parent=FBgn0027600.1.mrna1;Target=FBgn0027600.1 19 70 +
ChrX	stalkie_big_nohaplotig	CDS	88505494	88505559	.	+	2	Parent=FBgn0027600.1.mrna1;Target=FBgn0027600.1 71 136 +
ChrX	stalkie_big_nohaplotig	CDS	88519620	88519806	.	+	2	Parent=FBgn0027600.1.mrna1;Target=FBgn0027600.1 137 323 +
ChrX	stalkie_big_nohaplotig	CDS	88520546	88520664	.	+	1	Parent=FBgn0027600.1.mrna1;Target=FBgn0027600.1 324 442 +
ChrX	stalkie_big_nohaplotig	CDS	88525686	88526082	.	+	2	Parent=FBgn0027600.1.mrna1;Target=FBgn0027600.1 443 839 +
ChrX	stalkie_big_nohaplotig	CDS	88526147	88526291	.	+	1	Parent=FBgn0027600.1.mrna1;Target=FBgn0027600.1 840 984 +
ChrX	gffcl	locus	88514382	88515279	.	-	.	ID=RLOC_00004740;geneIDs=comp112576_c0_seq1.path1;transcripts=comp112576_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88514382	88515279	.	-	.	ID=comp112576_c0_seq1.mrna1;geneID=comp112576_c0_seq1.path1;Name=comp112576_c0_seq1;Dir=sensecoverage=99.3;identity=99.9;matches=733;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004740
ChrX	stalkie_big_nohaplotig	exon	88514382	88514541	100	-	.	Parent=comp112576_c0_seq1.mrna1;Target=comp112576_c0_seq1 579 738 +
ChrX	stalkie_big_nohaplotig	exon	88514634	88515085	99	-	.	Parent=comp112576_c0_seq1.mrna1;Target=comp112576_c0_seq1 127 578 +
ChrX	stalkie_big_nohaplotig	exon	88515158	88515279	100	-	.	Parent=comp112576_c0_seq1.mrna1;Target=comp112576_c0_seq1 5 126 +
ChrX	stalkie_big_nohaplotig	CDS	88514497	88514541	.	-	0	Parent=comp112576_c0_seq1.mrna1;Target=comp112576_c0_seq1 579 623 +
ChrX	stalkie_big_nohaplotig	CDS	88514634	88515074	.	-	0	Parent=comp112576_c0_seq1.mrna1;Target=comp112576_c0_seq1 138 578 +
ChrX	gffcl	locus	88603295	88608920	.	+	.	ID=RLOC_00004741;geneIDs=FBgn0011823.1.path1;transcripts=FBgn0011823.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88603295	88608920	.	+	.	ID=FBgn0011823.1.mrna1;geneID=FBgn0011823.1.path1;Name=FBgn0011823.1;Dir=sensecoverage=100.0;identity=100.0;matches=1575;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004741
ChrX	stalkie_big_nohaplotig	exon	88603295	88603369	100	+	.	Parent=FBgn0011823.1.mrna1;Target=FBgn0011823.1 1 75 +
ChrX	stalkie_big_nohaplotig	exon	88603437	88603750	100	+	.	Parent=FBgn0011823.1.mrna1;Target=FBgn0011823.1 76 389 +
ChrX	stalkie_big_nohaplotig	exon	88603810	88604380	100	+	.	Parent=FBgn0011823.1.mrna1;Target=FBgn0011823.1 390 960 +
ChrX	stalkie_big_nohaplotig	exon	88608248	88608395	100	+	.	Parent=FBgn0011823.1.mrna1;Target=FBgn0011823.1 961 1108 +
ChrX	stalkie_big_nohaplotig	exon	88608454	88608920	100	+	.	Parent=FBgn0011823.1.mrna1;Target=FBgn0011823.1 1109 1575 +
ChrX	stalkie_big_nohaplotig	CDS	88603295	88603369	.	+	0	Parent=FBgn0011823.1.mrna1;Target=FBgn0011823.1 1 75 +
ChrX	stalkie_big_nohaplotig	CDS	88603437	88603750	.	+	0	Parent=FBgn0011823.1.mrna1;Target=FBgn0011823.1 76 389 +
ChrX	stalkie_big_nohaplotig	CDS	88603810	88604380	.	+	1	Parent=FBgn0011823.1.mrna1;Target=FBgn0011823.1 390 960 +
ChrX	stalkie_big_nohaplotig	CDS	88608248	88608395	.	+	0	Parent=FBgn0011823.1.mrna1;Target=FBgn0011823.1 961 1108 +
ChrX	stalkie_big_nohaplotig	CDS	88608454	88608920	.	+	2	Parent=FBgn0011823.1.mrna1;Target=FBgn0011823.1 1109 1575 +
ChrX	gffcl	locus	88742968	88743633	.	-	.	ID=RLOC_00004742;geneIDs=FBgn0032181.1.path1;transcripts=FBgn0032181.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88742968	88743633	.	-	.	ID=FBgn0032181.1.mrna1;geneID=FBgn0032181.1.path1;Name=FBgn0032181.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=666;mismatches=0;indels=0;unknowns=0;Target=FBgn0032181.1 666 1 .;locus=RLOC_00004742
ChrX	stalkie_big_nohaplotig	exon	88742968	88743633	100	-	.	Parent=FBgn0032181.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	88742968	88743633	.	-	0	Parent=FBgn0032181.1.mrna1
ChrX	gffcl	locus	88835656	88837909	.	+	.	ID=RLOC_00004743;geneIDs=FBgn0036735.2.path1;transcripts=FBgn0036735.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88835656	88837909	.	+	.	ID=FBgn0036735.2.mrna1;geneID=FBgn0036735.2.path1;Name=FBgn0036735.2;Dir=sensecoverage=100.0;identity=99.8;matches=2185;mismatches=5;indels=0;unknowns=0;locus=RLOC_00004743
ChrX	stalkie_big_nohaplotig	exon	88835656	88835837	100	+	.	Parent=FBgn0036735.2.mrna1;Target=FBgn0036735.2 1 182 +
ChrX	stalkie_big_nohaplotig	exon	88835902	88837909	99	+	.	Parent=FBgn0036735.2.mrna1;Target=FBgn0036735.2 183 2190 +
ChrX	stalkie_big_nohaplotig	CDS	88835656	88835837	.	+	0	Parent=FBgn0036735.2.mrna1;Target=FBgn0036735.2 1 182 +
ChrX	stalkie_big_nohaplotig	CDS	88835902	88837909	.	+	1	Parent=FBgn0036735.2.mrna1;Target=FBgn0036735.2 183 2190 +
ChrX	gffcl	locus	88853869	88876149	.	+	.	ID=RLOC_00004744;geneIDs=FBgn0083945.path1;transcripts=FBgn0083945.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88853869	88876149	.	+	.	ID=FBgn0083945.mrna1;geneID=FBgn0083945.path1;Name=FBgn0083945;Dir=sensecoverage=100.0;identity=100.0;matches=843;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004744
ChrX	stalkie_big_nohaplotig	exon	88853869	88853885	100	+	.	Parent=FBgn0083945.mrna1;Target=FBgn0083945 1 17 +
ChrX	stalkie_big_nohaplotig	exon	88862224	88862313	100	+	.	Parent=FBgn0083945.mrna1;Target=FBgn0083945 18 107 +
ChrX	stalkie_big_nohaplotig	exon	88866325	88866460	100	+	.	Parent=FBgn0083945.mrna1;Target=FBgn0083945 108 243 +
ChrX	stalkie_big_nohaplotig	exon	88875550	88876149	100	+	.	Parent=FBgn0083945.mrna1;Target=FBgn0083945 244 843 +
ChrX	stalkie_big_nohaplotig	CDS	88853869	88853885	.	+	0	Parent=FBgn0083945.mrna1;Target=FBgn0083945 1 17 +
ChrX	stalkie_big_nohaplotig	CDS	88862224	88862313	.	+	1	Parent=FBgn0083945.mrna1;Target=FBgn0083945 18 107 +
ChrX	stalkie_big_nohaplotig	CDS	88866325	88866460	.	+	1	Parent=FBgn0083945.mrna1;Target=FBgn0083945 108 243 +
ChrX	stalkie_big_nohaplotig	CDS	88875550	88876149	.	+	0	Parent=FBgn0083945.mrna1;Target=FBgn0083945 244 843 +
ChrX	gffcl	locus	88951312	88971891	.	+	.	ID=RLOC_00004745;geneIDs=FBgn0032187.1.path1,comp160030_c1_seq1.path1;transcripts=comp160030_c1_seq1.mrna1,FBgn0032187.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	88951312	88971891	.	+	.	ID=comp160030_c1_seq1.mrna1;geneID=comp160030_c1_seq1.path1;Name=comp160030_c1_seq1;Dir=sensecoverage=98.9;identity=100.0;matches=5436;mismatches=2;indels=0;unknowns=0;locus=RLOC_00004745
ChrX	stalkie_big_nohaplotig	exon	88951312	88952780	99	+	.	Parent=comp160030_c1_seq1.mrna1;Target=comp160030_c1_seq1 1 1469 +
ChrX	stalkie_big_nohaplotig	exon	88964751	88964810	100	+	.	Parent=comp160030_c1_seq1.mrna1;Target=comp160030_c1_seq1 1470 1529 +
ChrX	stalkie_big_nohaplotig	exon	88965023	88966545	100	+	.	Parent=comp160030_c1_seq1.mrna1;Target=comp160030_c1_seq1 1530 3052 +
ChrX	stalkie_big_nohaplotig	exon	88967728	88967870	100	+	.	Parent=comp160030_c1_seq1.mrna1;Target=comp160030_c1_seq1 3053 3195 +
ChrX	stalkie_big_nohaplotig	exon	88967962	88968245	100	+	.	Parent=comp160030_c1_seq1.mrna1;Target=comp160030_c1_seq1 3196 3479 +
ChrX	stalkie_big_nohaplotig	exon	88968336	88968505	100	+	.	Parent=comp160030_c1_seq1.mrna1;Target=comp160030_c1_seq1 3480 3649 +
ChrX	stalkie_big_nohaplotig	exon	88968565	88968803	100	+	.	Parent=comp160030_c1_seq1.mrna1;Target=comp160030_c1_seq1 3650 3888 +
ChrX	stalkie_big_nohaplotig	exon	88968875	88969189	100	+	.	Parent=comp160030_c1_seq1.mrna1;Target=comp160030_c1_seq1 3889 4203 +
ChrX	stalkie_big_nohaplotig	exon	88969253	88969484	100	+	.	Parent=comp160030_c1_seq1.mrna1;Target=comp160030_c1_seq1 4204 4435 +
ChrX	stalkie_big_nohaplotig	exon	88970821	88971170	100	+	.	Parent=comp160030_c1_seq1.mrna1;Target=comp160030_c1_seq1 4436 4785 +
ChrX	stalkie_big_nohaplotig	exon	88971239	88971891	99	+	.	Parent=comp160030_c1_seq1.mrna1;Target=comp160030_c1_seq1 4786 5438 +
ChrX	stalkie_big_nohaplotig	CDS	88968017	88968245	.	+	0	Parent=comp160030_c1_seq1.mrna1;Target=comp160030_c1_seq1 3251 3479 +
ChrX	stalkie_big_nohaplotig	CDS	88968336	88968505	.	+	2	Parent=comp160030_c1_seq1.mrna1;Target=comp160030_c1_seq1 3480 3649 +
ChrX	stalkie_big_nohaplotig	CDS	88968565	88968803	.	+	0	Parent=comp160030_c1_seq1.mrna1;Target=comp160030_c1_seq1 3650 3888 +
ChrX	stalkie_big_nohaplotig	CDS	88968875	88969189	.	+	1	Parent=comp160030_c1_seq1.mrna1;Target=comp160030_c1_seq1 3889 4203 +
ChrX	stalkie_big_nohaplotig	CDS	88969253	88969484	.	+	1	Parent=comp160030_c1_seq1.mrna1;Target=comp160030_c1_seq1 4204 4435 +
ChrX	stalkie_big_nohaplotig	CDS	88970821	88971170	.	+	0	Parent=comp160030_c1_seq1.mrna1;Target=comp160030_c1_seq1 4436 4785 +
ChrX	stalkie_big_nohaplotig	CDS	88971239	88971404	.	+	1	Parent=comp160030_c1_seq1.mrna1;Target=comp160030_c1_seq1 4786 4951 +
ChrX	stalkie_big_nohaplotig	mRNA	88952628	88971401	.	+	.	ID=FBgn0032187.1.mrna1;geneID=FBgn0032187.1.path1;Name=FBgn0032187.1;Dir=sensecoverage=100.0;identity=100.0;matches=3129;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004745
ChrX	stalkie_big_nohaplotig	exon	88952628	88952780	100	+	.	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 1 153 +
ChrX	stalkie_big_nohaplotig	exon	88964751	88964810	100	+	.	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 154 213 +
ChrX	stalkie_big_nohaplotig	exon	88965023	88965931	100	+	.	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 214 1122 +
ChrX	stalkie_big_nohaplotig	exon	88966435	88966545	100	+	.	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 1123 1233 +
ChrX	stalkie_big_nohaplotig	exon	88967728	88967870	100	+	.	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 1234 1376 +
ChrX	stalkie_big_nohaplotig	exon	88967962	88968245	100	+	.	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 1377 1660 +
ChrX	stalkie_big_nohaplotig	exon	88968336	88968505	100	+	.	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 1661 1830 +
ChrX	stalkie_big_nohaplotig	exon	88968565	88968803	100	+	.	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 1831 2069 +
ChrX	stalkie_big_nohaplotig	exon	88968875	88969189	100	+	.	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 2070 2384 +
ChrX	stalkie_big_nohaplotig	exon	88969253	88969484	100	+	.	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 2385 2616 +
ChrX	stalkie_big_nohaplotig	exon	88970821	88971170	100	+	.	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 2617 2966 +
ChrX	stalkie_big_nohaplotig	exon	88971239	88971401	100	+	.	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 2967 3129 +
ChrX	stalkie_big_nohaplotig	CDS	88952628	88952780	.	+	0	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 1 153 +
ChrX	stalkie_big_nohaplotig	CDS	88964751	88964810	.	+	0	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 154 213 +
ChrX	stalkie_big_nohaplotig	CDS	88965023	88965931	.	+	0	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 214 1122 +
ChrX	stalkie_big_nohaplotig	CDS	88966435	88966545	.	+	0	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 1123 1233 +
ChrX	stalkie_big_nohaplotig	CDS	88967728	88967870	.	+	0	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 1234 1376 +
ChrX	stalkie_big_nohaplotig	CDS	88967962	88968245	.	+	1	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 1377 1660 +
ChrX	stalkie_big_nohaplotig	CDS	88968336	88968505	.	+	2	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 1661 1830 +
ChrX	stalkie_big_nohaplotig	CDS	88968565	88968803	.	+	0	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 1831 2069 +
ChrX	stalkie_big_nohaplotig	CDS	88968875	88969189	.	+	1	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 2070 2384 +
ChrX	stalkie_big_nohaplotig	CDS	88969253	88969484	.	+	1	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 2385 2616 +
ChrX	stalkie_big_nohaplotig	CDS	88970821	88971170	.	+	0	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 2617 2966 +
ChrX	stalkie_big_nohaplotig	CDS	88971239	88971401	.	+	1	Parent=FBgn0032187.1.mrna1;Target=FBgn0032187.1 2967 3129 +
ChrX	gffcl	locus	89179699	89181754	.	+	.	ID=RLOC_00004746;geneIDs=comp91740_c0_seq1.path1;transcripts=comp91740_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89179699	89181754	.	+	.	ID=comp91740_c0_seq1.mrna1;geneID=comp91740_c0_seq1.path1;Name=comp91740_c0_seq1;Dir=antisensecoverage=92.0;identity=99.9;matches=767;mismatches=1;indels=0;unknowns=0;Target=comp91740_c0_seq1 119 601 .;locus=RLOC_00004746
ChrX	stalkie_big_nohaplotig	exon	89179699	89179917	99	+	.	Parent=comp91740_c0_seq1.mrna1;Target=comp91740_c0_seq1 616 834 -
ChrX	stalkie_big_nohaplotig	exon	89181206	89181754	100	+	.	Parent=comp91740_c0_seq1.mrna1;Target=comp91740_c0_seq1 67 615 -
ChrX	stalkie_big_nohaplotig	CDS	89181220	89181702	.	+	0	Parent=comp91740_c0_seq1.mrna1
ChrX	gffcl	locus	89181952	89237500	.	-	.	ID=RLOC_00004747;geneIDs=FBgn0028675.path1;transcripts=FBgn0028675.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89181952	89237500	.	-	.	ID=FBgn0028675.mrna1;geneID=FBgn0028675.path1;Name=FBgn0028675;Dir=sensecoverage=100.0;identity=100.0;matches=2925;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004747
ChrX	stalkie_big_nohaplotig	exon	89181952	89182152	100	-	.	Parent=FBgn0028675.mrna1;Target=FBgn0028675 2725 2925 +
ChrX	stalkie_big_nohaplotig	exon	89182234	89182430	100	-	.	Parent=FBgn0028675.mrna1;Target=FBgn0028675 2528 2724 +
ChrX	stalkie_big_nohaplotig	exon	89183129	89183423	100	-	.	Parent=FBgn0028675.mrna1;Target=FBgn0028675 2233 2527 +
ChrX	stalkie_big_nohaplotig	exon	89190444	89190571	100	-	.	Parent=FBgn0028675.mrna1;Target=FBgn0028675 2105 2232 +
ChrX	stalkie_big_nohaplotig	exon	89206907	89207116	100	-	.	Parent=FBgn0028675.mrna1;Target=FBgn0028675 1895 2104 +
ChrX	stalkie_big_nohaplotig	exon	89208960	89209485	100	-	.	Parent=FBgn0028675.mrna1;Target=FBgn0028675 1369 1894 +
ChrX	stalkie_big_nohaplotig	exon	89213847	89214042	100	-	.	Parent=FBgn0028675.mrna1;Target=FBgn0028675 1173 1368 +
ChrX	stalkie_big_nohaplotig	exon	89221440	89221597	100	-	.	Parent=FBgn0028675.mrna1;Target=FBgn0028675 1015 1172 +
ChrX	stalkie_big_nohaplotig	exon	89223004	89223653	100	-	.	Parent=FBgn0028675.mrna1;Target=FBgn0028675 365 1014 +
ChrX	stalkie_big_nohaplotig	exon	89233491	89233654	100	-	.	Parent=FBgn0028675.mrna1;Target=FBgn0028675 201 364 +
ChrX	stalkie_big_nohaplotig	exon	89237301	89237500	100	-	.	Parent=FBgn0028675.mrna1;Target=FBgn0028675 1 200 +
ChrX	stalkie_big_nohaplotig	CDS	89181952	89182152	.	-	0	Parent=FBgn0028675.mrna1;Target=FBgn0028675 2725 2925 +
ChrX	stalkie_big_nohaplotig	CDS	89182234	89182430	.	-	2	Parent=FBgn0028675.mrna1;Target=FBgn0028675 2528 2724 +
ChrX	stalkie_big_nohaplotig	CDS	89183129	89183423	.	-	0	Parent=FBgn0028675.mrna1;Target=FBgn0028675 2233 2527 +
ChrX	stalkie_big_nohaplotig	CDS	89190444	89190571	.	-	2	Parent=FBgn0028675.mrna1;Target=FBgn0028675 2105 2232 +
ChrX	stalkie_big_nohaplotig	CDS	89206907	89207116	.	-	2	Parent=FBgn0028675.mrna1;Target=FBgn0028675 1895 2104 +
ChrX	stalkie_big_nohaplotig	CDS	89208960	89209485	.	-	0	Parent=FBgn0028675.mrna1;Target=FBgn0028675 1369 1894 +
ChrX	stalkie_big_nohaplotig	CDS	89213847	89214042	.	-	1	Parent=FBgn0028675.mrna1;Target=FBgn0028675 1173 1368 +
ChrX	stalkie_big_nohaplotig	CDS	89221440	89221597	.	-	0	Parent=FBgn0028675.mrna1;Target=FBgn0028675 1015 1172 +
ChrX	stalkie_big_nohaplotig	CDS	89223004	89223653	.	-	2	Parent=FBgn0028675.mrna1;Target=FBgn0028675 365 1014 +
ChrX	stalkie_big_nohaplotig	CDS	89233491	89233654	.	-	1	Parent=FBgn0028675.mrna1;Target=FBgn0028675 201 364 +
ChrX	stalkie_big_nohaplotig	CDS	89237301	89237500	.	-	0	Parent=FBgn0028675.mrna1;Target=FBgn0028675 1 200 +
ChrX	gffcl	locus	89252279	89376387	.	.	.	ID=RLOC_00004748;geneIDs=comp144604_c0_seq1.path1,comp150250_c0_seq1.path1;transcripts=comp150250_c0_seq1.mrna1,comp144604_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89252279	89376387	.	+	.	ID=comp150250_c0_seq1.mrna1;geneID=comp150250_c0_seq1.path1;Name=comp150250_c0_seq1;Dir=indeterminatecoverage=84.6;identity=97.5;matches=1162;mismatches=19;indels=11;unknowns=0;Target=comp150250_c0_seq1 785 543 .;locus=RLOC_00004748
ChrX	stalkie_big_nohaplotig	exon	89252279	89252284	100	+	.	Parent=comp150250_c0_seq1.mrna1;Target=comp150250_c0_seq1 224 219 .
ChrX	stalkie_big_nohaplotig	exon	89255801	89255804	100	+	.	Parent=comp150250_c0_seq1.mrna1;Target=comp150250_c0_seq1 228 225 .
ChrX	stalkie_big_nohaplotig	exon	89260345	89260346	100	+	.	Parent=comp150250_c0_seq1.mrna1;Target=comp150250_c0_seq1 230 229 .
ChrX	stalkie_big_nohaplotig	exon	89265070	89265073	100	+	.	Parent=comp150250_c0_seq1.mrna1;Target=comp150250_c0_seq1 234 231 .
ChrX	stalkie_big_nohaplotig	exon	89271733	89271738	100	+	.	Parent=comp150250_c0_seq1.mrna1;Target=comp150250_c0_seq1 240 235 .
ChrX	stalkie_big_nohaplotig	exon	89275074	89275077	100	+	.	Parent=comp150250_c0_seq1.mrna1;Target=comp150250_c0_seq1 244 241 .
ChrX	stalkie_big_nohaplotig	exon	89291134	89291139	100	+	.	Parent=comp150250_c0_seq1.mrna1;Target=comp150250_c0_seq1 250 245 .
ChrX	stalkie_big_nohaplotig	exon	89304700	89304705	100	+	.	Parent=comp150250_c0_seq1.mrna1;Target=comp150250_c0_seq1 256 251 .
ChrX	stalkie_big_nohaplotig	exon	89308024	89308035	100	+	.	Parent=comp150250_c0_seq1.mrna1;Target=comp150250_c0_seq1 268 257 .
ChrX	stalkie_big_nohaplotig	exon	89314722	89314731	100	+	.	Parent=comp150250_c0_seq1.mrna1;Target=comp150250_c0_seq1 298 289 .
ChrX	stalkie_big_nohaplotig	exon	89318951	89318956	100	+	.	Parent=comp150250_c0_seq1.mrna1;Target=comp150250_c0_seq1 304 299 .
ChrX	stalkie_big_nohaplotig	exon	89352192	89352240	53	+	.	Parent=comp150250_c0_seq1.mrna1;Target=comp150250_c0_seq1 344 305 .
ChrX	stalkie_big_nohaplotig	exon	89353185	89353191	100	+	.	Parent=comp150250_c0_seq1.mrna1;Target=comp150250_c0_seq1 351 345 .
ChrX	stalkie_big_nohaplotig	exon	89359995	89359999	100	+	.	Parent=comp150250_c0_seq1.mrna1;Target=comp150250_c0_seq1 356 352 .
ChrX	stalkie_big_nohaplotig	exon	89366450	89366458	77	+	.	Parent=comp150250_c0_seq1.mrna1;Target=comp150250_c0_seq1 365 357 .
ChrX	stalkie_big_nohaplotig	exon	89370438	89370454	76	+	.	Parent=comp150250_c0_seq1.mrna1;Target=comp150250_c0_seq1 380 366 .
ChrX	stalkie_big_nohaplotig	exon	89375350	89376387	99	+	.	Parent=comp150250_c0_seq1.mrna1;Target=comp150250_c0_seq1 1418 381 .
ChrX	stalkie_big_nohaplotig	CDS	89375512	89375754	.	+	0	Parent=comp150250_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89373985	89375349	.	-	.	ID=comp144604_c0_seq1.mrna1;geneID=comp144604_c0_seq1.path1;Name=comp144604_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1365;mismatches=0;indels=0;unknowns=0;Target=comp144604_c0_seq1 1365 1 .;CDS_Target=comp144604_c0_seq1 252 67 .;locus=RLOC_00004748
ChrX	stalkie_big_nohaplotig	exon	89373985	89375349	100	-	.	Parent=comp144604_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	89375098	89375283	.	-	0	Parent=comp144604_c0_seq1.mrna1
ChrX	gffcl	locus	89261761	89333632	.	-	.	ID=RLOC_00004749;geneIDs=comp161522_c1_seq1.path1;transcripts=comp161522_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89261761	89333632	.	-	.	ID=comp161522_c1_seq1.mrna1;geneID=comp161522_c1_seq1.path1;Name=comp161522_c1_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=3758;mismatches=6;indels=1;unknowns=0;locus=RLOC_00004749
ChrX	stalkie_big_nohaplotig	exon	89261761	89262664	100	-	.	Parent=comp161522_c1_seq1.mrna1;Target=comp161522_c1_seq1 1 904 -
ChrX	stalkie_big_nohaplotig	exon	89262718	89262880	100	-	.	Parent=comp161522_c1_seq1.mrna1;Target=comp161522_c1_seq1 905 1067 -
ChrX	stalkie_big_nohaplotig	exon	89265695	89265832	100	-	.	Parent=comp161522_c1_seq1.mrna1;Target=comp161522_c1_seq1 1068 1205 -
ChrX	stalkie_big_nohaplotig	exon	89270387	89270490	100	-	.	Parent=comp161522_c1_seq1.mrna1;Target=comp161522_c1_seq1 1206 1309 -
ChrX	stalkie_big_nohaplotig	exon	89292811	89293645	100	-	.	Parent=comp161522_c1_seq1.mrna1;Target=comp161522_c1_seq1 1310 2144 -
ChrX	stalkie_big_nohaplotig	exon	89293708	89293926	100	-	.	Parent=comp161522_c1_seq1.mrna1;Target=comp161522_c1_seq1 2145 2363 -
ChrX	stalkie_big_nohaplotig	exon	89311991	89312166	100	-	.	Parent=comp161522_c1_seq1.mrna1;Target=comp161522_c1_seq1 2364 2539 -
ChrX	stalkie_big_nohaplotig	exon	89312287	89312639	98	-	.	Parent=comp161522_c1_seq1.mrna1;Target=comp161522_c1_seq1 2540 2892 -
ChrX	stalkie_big_nohaplotig	exon	89332761	89333632	99	-	.	Parent=comp161522_c1_seq1.mrna1;Target=comp161522_c1_seq1 2893 3765 -
ChrX	stalkie_big_nohaplotig	CDS	89261763	89262664	.	-	2	Parent=comp161522_c1_seq1.mrna1;Target=comp161522_c1_seq1 3 904 .
ChrX	stalkie_big_nohaplotig	CDS	89262718	89262880	.	-	0	Parent=comp161522_c1_seq1.mrna1;Target=comp161522_c1_seq1 905 1067 .
ChrX	stalkie_big_nohaplotig	CDS	89265695	89265832	.	-	0	Parent=comp161522_c1_seq1.mrna1;Target=comp161522_c1_seq1 1068 1205 .
ChrX	stalkie_big_nohaplotig	CDS	89270387	89270490	.	-	2	Parent=comp161522_c1_seq1.mrna1;Target=comp161522_c1_seq1 1206 1309 .
ChrX	stalkie_big_nohaplotig	CDS	89292811	89293645	.	-	0	Parent=comp161522_c1_seq1.mrna1;Target=comp161522_c1_seq1 1310 2144 .
ChrX	stalkie_big_nohaplotig	CDS	89293708	89293926	.	-	0	Parent=comp161522_c1_seq1.mrna1;Target=comp161522_c1_seq1 2145 2363 .
ChrX	stalkie_big_nohaplotig	CDS	89311991	89312166	.	-	2	Parent=comp161522_c1_seq1.mrna1;Target=comp161522_c1_seq1 2364 2539 .
ChrX	stalkie_big_nohaplotig	CDS	89312287	89312639	.	-	1	Parent=comp161522_c1_seq1.mrna1;Target=comp161522_c1_seq1 2540 2892 .
ChrX	stalkie_big_nohaplotig	CDS	89332761	89332924	.	-	0	Parent=comp161522_c1_seq1.mrna1;Target=comp161522_c1_seq1 2893 3056 .
ChrX	gffcl	locus	89353872	89355035	.	+	.	ID=RLOC_00004751;geneIDs=FBgn0027597.1.path1;transcripts=FBgn0027597.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89353872	89355035	.	+	.	ID=FBgn0027597.1.mrna1;geneID=FBgn0027597.1.path1;Name=FBgn0027597.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1164;mismatches=0;indels=0;unknowns=0;Target=FBgn0027597.1 1164 1 .;locus=RLOC_00004751
ChrX	stalkie_big_nohaplotig	exon	89353872	89355035	100	+	.	Parent=FBgn0027597.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	89353872	89355035	.	+	0	Parent=FBgn0027597.1.mrna1
ChrX	gffcl	locus	89355268	89356026	.	-	.	ID=RLOC_00004752;geneIDs=FBgn0034744.1.path1;transcripts=FBgn0034744.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89355268	89356026	.	-	.	ID=FBgn0034744.1.mrna1;geneID=FBgn0034744.1.path1;Name=FBgn0034744.1;Dir=sensecoverage=100.0;identity=100.0;matches=633;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004752
ChrX	stalkie_big_nohaplotig	exon	89355268	89355709	100	-	.	Parent=FBgn0034744.1.mrna1;Target=FBgn0034744.1 192 633 +
ChrX	stalkie_big_nohaplotig	exon	89355777	89355886	100	-	.	Parent=FBgn0034744.1.mrna1;Target=FBgn0034744.1 82 191 +
ChrX	stalkie_big_nohaplotig	exon	89355946	89356026	100	-	.	Parent=FBgn0034744.1.mrna1;Target=FBgn0034744.1 1 81 +
ChrX	stalkie_big_nohaplotig	CDS	89355268	89355709	.	-	1	Parent=FBgn0034744.1.mrna1;Target=FBgn0034744.1 192 633 +
ChrX	stalkie_big_nohaplotig	CDS	89355777	89355886	.	-	0	Parent=FBgn0034744.1.mrna1;Target=FBgn0034744.1 82 191 +
ChrX	stalkie_big_nohaplotig	CDS	89355946	89356026	.	-	0	Parent=FBgn0034744.1.mrna1;Target=FBgn0034744.1 1 81 +
ChrX	gffcl	locus	89357468	89358598	.	+	.	ID=RLOC_00004753;geneIDs=FBgn0005593.2.path1;transcripts=FBgn0005593.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89357468	89358598	.	+	.	ID=FBgn0005593.2.mrna1;geneID=FBgn0005593.2.path1;Name=FBgn0005593.2;Dir=sensecoverage=100.0;identity=99.9;matches=752;mismatches=0;indels=1;unknowns=0;Target=FBgn0005593.2 3 26 +;locus=RLOC_00004753
ChrX	stalkie_big_nohaplotig	exon	89357468	89357762	99	+	.	Parent=FBgn0005593.2.mrna1;Target=FBgn0005593.2 1 296 +
ChrX	stalkie_big_nohaplotig	exon	89358142	89358598	100	+	.	Parent=FBgn0005593.2.mrna1;Target=FBgn0005593.2 297 753 +
ChrX	stalkie_big_nohaplotig	CDS	89357470	89357492	.	+	0	Parent=FBgn0005593.2.mrna1
ChrX	gffcl	locus	89365306	89365571	.	-	.	ID=RLOC_00004754;geneIDs=comp59020_c0_seq1.path1;transcripts=comp59020_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89365306	89365571	.	-	.	ID=comp59020_c0_seq1.mrna1;geneID=comp59020_c0_seq1.path1;Name=comp59020_c0_seq1;Dir=indeterminatecoverage=93.0;identity=99.2;matches=264;mismatches=2;indels=0;unknowns=0;Target=comp59020_c0_seq1 282 17 .;CDS_Target=comp59020_c0_seq1 229 149 .;locus=RLOC_00004754
ChrX	stalkie_big_nohaplotig	exon	89365306	89365571	99	-	.	Parent=comp59020_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	89365359	89365439	.	-	0	Parent=comp59020_c0_seq1.mrna1
ChrX	gffcl	locus	89367109	89373980	.	+	.	ID=RLOC_00004755;geneIDs=comp147611_c1_seq1.path1;transcripts=comp147611_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89367109	89373980	.	+	.	ID=comp147611_c1_seq1.mrna1;geneID=comp147611_c1_seq1.path1;Name=comp147611_c1_seq1;Dir=indeterminatecoverage=72.4;identity=99.9;matches=1751;mismatches=0;indels=1;unknowns=0;Target=comp147611_c1_seq1 1427 1215 .;locus=RLOC_00004755
ChrX	stalkie_big_nohaplotig	exon	89367109	89367330	100	+	.	Parent=comp147611_c1_seq1.mrna1;Target=comp147611_c1_seq1 871 650 .
ChrX	stalkie_big_nohaplotig	exon	89371902	89372162	100	+	.	Parent=comp147611_c1_seq1.mrna1;Target=comp147611_c1_seq1 1132 872 .
ChrX	stalkie_big_nohaplotig	exon	89372571	89373803	99	+	.	Parent=comp147611_c1_seq1.mrna1;Target=comp147611_c1_seq1 2366 1133 .
ChrX	stalkie_big_nohaplotig	exon	89373946	89373980	100	+	.	Parent=comp147611_c1_seq1.mrna1;Target=comp147611_c1_seq1 2401 2367 .
ChrX	stalkie_big_nohaplotig	CDS	89372653	89372865	.	+	0	Parent=comp147611_c1_seq1.mrna1
ChrX	gffcl	locus	89395268	89395725	.	-	.	ID=RLOC_00004756;geneIDs=comp189958_c0_seq1.path1;transcripts=comp189958_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89395268	89395725	.	-	.	ID=comp189958_c0_seq1.mrna1;geneID=comp189958_c0_seq1.path1;Name=comp189958_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=458;mismatches=0;indels=0;unknowns=0;Target=comp189958_c0_seq1 458 1 .;CDS_Target=comp189958_c0_seq1 311 204 .;locus=RLOC_00004756
ChrX	stalkie_big_nohaplotig	exon	89395268	89395725	100	-	.	Parent=comp189958_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	89395415	89395522	.	-	0	Parent=comp189958_c0_seq1.mrna1
ChrX	gffcl	locus	89395963	89397468	.	-	.	ID=RLOC_00004757;geneIDs=FBgn0032191.1.path1;transcripts=FBgn0032191.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89395963	89397468	.	-	.	ID=FBgn0032191.1.mrna1;geneID=FBgn0032191.1.path1;Name=FBgn0032191.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1506;mismatches=0;indels=0;unknowns=0;Target=FBgn0032191.1 1506 1 .;locus=RLOC_00004757
ChrX	stalkie_big_nohaplotig	exon	89395963	89397468	100	-	.	Parent=FBgn0032191.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	89395963	89397468	.	-	0	Parent=FBgn0032191.1.mrna1
ChrX	gffcl	locus	89410118	91269415	.	+	.	ID=RLOC_00004758;geneIDs=FBgn0003732.1.path1,comp159956_c3_seq1.path1;transcripts=comp159956_c3_seq1.mrna1,FBgn0003732.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89410118	91269415	.	+	.	ID=comp159956_c3_seq1.mrna1;geneID=comp159956_c3_seq1.path1;Name=comp159956_c3_seq1;Dir=indeterminatecoverage=53.0;identity=97.8;matches=5029;mismatches=62;indels=50;unknowns=0;locus=RLOC_00004758
ChrX	stalkie_big_nohaplotig	exon	89410118	89410203	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 86 1 .
ChrX	stalkie_big_nohaplotig	exon	89410460	89410509	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 136 87 .
ChrX	stalkie_big_nohaplotig	exon	89412749	89413362	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 750 137 .
ChrX	stalkie_big_nohaplotig	exon	89413431	89413851	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 1171 751 .
ChrX	stalkie_big_nohaplotig	exon	89413909	89414709	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 1972 1172 .
ChrX	stalkie_big_nohaplotig	exon	89414790	89416702	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 3885 1973 .
ChrX	stalkie_big_nohaplotig	exon	89416843	89417133	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4176 3886 .
ChrX	stalkie_big_nohaplotig	exon	89417202	89417558	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4533 4177 .
ChrX	stalkie_big_nohaplotig	exon	89417615	89417782	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4701 4534 .
ChrX	stalkie_big_nohaplotig	exon	89443231	89443265	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4736 4702 .
ChrX	stalkie_big_nohaplotig	exon	91184031	91184038	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4744 4737 .
ChrX	stalkie_big_nohaplotig	exon	91185682	91185695	85	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4758 4745 .
ChrX	stalkie_big_nohaplotig	exon	91191176	91191184	88	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4767 4759 .
ChrX	stalkie_big_nohaplotig	exon	91192886	91192892	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4774 4768 .
ChrX	stalkie_big_nohaplotig	exon	91198659	91198662	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4778 4775 .
ChrX	stalkie_big_nohaplotig	exon	91199413	91199419	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4785 4779 .
ChrX	stalkie_big_nohaplotig	exon	91206573	91206577	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4790 4786 .
ChrX	stalkie_big_nohaplotig	exon	91208379	91208381	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4793 4791 .
ChrX	stalkie_big_nohaplotig	exon	91215093	91215105	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4806 4794 .
ChrX	stalkie_big_nohaplotig	exon	91219303	91219346	50	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4841 4807 .
ChrX	stalkie_big_nohaplotig	exon	91221381	91221385	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4846 4842 .
ChrX	stalkie_big_nohaplotig	exon	91235869	91235878	90	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4856 4847 .
ChrX	stalkie_big_nohaplotig	exon	91236595	91236601	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4863 4857 .
ChrX	stalkie_big_nohaplotig	exon	91238464	91238469	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4869 4864 .
ChrX	stalkie_big_nohaplotig	exon	91239022	91239027	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4875 4870 .
ChrX	stalkie_big_nohaplotig	exon	91239444	91239449	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4881 4876 .
ChrX	stalkie_big_nohaplotig	exon	91243428	91243435	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4889 4882 .
ChrX	stalkie_big_nohaplotig	exon	91243488	91243495	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4897 4890 .
ChrX	stalkie_big_nohaplotig	exon	91243615	91243616	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4899 4898 .
ChrX	stalkie_big_nohaplotig	exon	91245018	91245028	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4910 4900 .
ChrX	stalkie_big_nohaplotig	exon	91252953	91252955	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4913 4911 .
ChrX	stalkie_big_nohaplotig	exon	91253706	91253769	62	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4982 4914 .
ChrX	stalkie_big_nohaplotig	exon	91254167	91254181	93	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4997 4983 .
ChrX	stalkie_big_nohaplotig	exon	91257670	91257724	50	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 5060 4998 .
ChrX	stalkie_big_nohaplotig	exon	91258194	91258200	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 5067 5061 .
ChrX	stalkie_big_nohaplotig	exon	91262092	91262136	46	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 5089 5068 .
ChrX	stalkie_big_nohaplotig	exon	91269393	91269402	60	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 5096 5090 .
ChrX	stalkie_big_nohaplotig	exon	91269407	91269415	100	+	.	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 5134 5126 .
ChrX	stalkie_big_nohaplotig	CDS	89412775	89413362	.	+	0	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 750 163 .
ChrX	stalkie_big_nohaplotig	CDS	89413431	89413851	.	+	0	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 1171 751 .
ChrX	stalkie_big_nohaplotig	CDS	89413909	89414709	.	+	2	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 1972 1172 .
ChrX	stalkie_big_nohaplotig	CDS	89414790	89416702	.	+	2	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 3885 1973 .
ChrX	stalkie_big_nohaplotig	CDS	89416843	89417133	.	+	0	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4176 3886 .
ChrX	stalkie_big_nohaplotig	CDS	89417202	89417558	.	+	0	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4533 4177 .
ChrX	stalkie_big_nohaplotig	CDS	89417615	89417665	.	+	0	Parent=comp159956_c3_seq1.mrna1;Target=comp159956_c3_seq1 4584 4534 .
ChrX	stalkie_big_nohaplotig	mRNA	89410127	89443111	.	+	.	ID=FBgn0003732.1.mrna1;geneID=FBgn0003732.1.path1;Name=FBgn0003732.1;Dir=sensecoverage=100.0;identity=100.0;matches=4571;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004758
ChrX	stalkie_big_nohaplotig	exon	89410127	89410203	100	+	.	Parent=FBgn0003732.1.mrna1;Target=FBgn0003732.1 1 77 +
ChrX	stalkie_big_nohaplotig	exon	89410460	89410509	100	+	.	Parent=FBgn0003732.1.mrna1;Target=FBgn0003732.1 78 127 +
ChrX	stalkie_big_nohaplotig	exon	89412749	89413362	100	+	.	Parent=FBgn0003732.1.mrna1;Target=FBgn0003732.1 128 741 +
ChrX	stalkie_big_nohaplotig	exon	89413431	89413851	100	+	.	Parent=FBgn0003732.1.mrna1;Target=FBgn0003732.1 742 1162 +
ChrX	stalkie_big_nohaplotig	exon	89413909	89414709	100	+	.	Parent=FBgn0003732.1.mrna1;Target=FBgn0003732.1 1163 1963 +
ChrX	stalkie_big_nohaplotig	exon	89414790	89416702	100	+	.	Parent=FBgn0003732.1.mrna1;Target=FBgn0003732.1 1964 3876 +
ChrX	stalkie_big_nohaplotig	exon	89416843	89417133	100	+	.	Parent=FBgn0003732.1.mrna1;Target=FBgn0003732.1 3877 4167 +
ChrX	stalkie_big_nohaplotig	exon	89442651	89443007	99	+	.	Parent=FBgn0003732.1.mrna1;Target=FBgn0003732.1 4168 4524 +
ChrX	stalkie_big_nohaplotig	exon	89443064	89443111	100	+	.	Parent=FBgn0003732.1.mrna1;Target=FBgn0003732.1 4525 4572 +
ChrX	stalkie_big_nohaplotig	CDS	89410127	89410203	.	+	0	Parent=FBgn0003732.1.mrna1;Target=FBgn0003732.1 1 77 +
ChrX	stalkie_big_nohaplotig	CDS	89410460	89410509	.	+	1	Parent=FBgn0003732.1.mrna1;Target=FBgn0003732.1 78 127 +
ChrX	stalkie_big_nohaplotig	CDS	89412749	89413362	.	+	2	Parent=FBgn0003732.1.mrna1;Target=FBgn0003732.1 128 741 +
ChrX	stalkie_big_nohaplotig	CDS	89413431	89413851	.	+	0	Parent=FBgn0003732.1.mrna1;Target=FBgn0003732.1 742 1162 +
ChrX	stalkie_big_nohaplotig	CDS	89413909	89414709	.	+	2	Parent=FBgn0003732.1.mrna1;Target=FBgn0003732.1 1163 1963 +
ChrX	stalkie_big_nohaplotig	CDS	89414790	89416702	.	+	2	Parent=FBgn0003732.1.mrna1;Target=FBgn0003732.1 1964 3876 +
ChrX	stalkie_big_nohaplotig	CDS	89416843	89417133	.	+	0	Parent=FBgn0003732.1.mrna1;Target=FBgn0003732.1 3877 4167 +
ChrX	stalkie_big_nohaplotig	CDS	89442651	89443007	.	+	0	Parent=FBgn0003732.1.mrna1;Target=FBgn0003732.1 4168 4524 +
ChrX	stalkie_big_nohaplotig	CDS	89443064	89443111	.	+	0	Parent=FBgn0003732.1.mrna1;Target=FBgn0003732.1 4525 4572 +
ChrX	gffcl	locus	89410552	89410900	.	-	.	ID=RLOC_00004759;geneIDs=comp141910_c1_seq1.path1;transcripts=comp141910_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89410552	89410900	.	-	.	ID=comp141910_c1_seq1.mrna1;geneID=comp141910_c1_seq1.path1;Name=comp141910_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=349;mismatches=0;indels=0;unknowns=0;Target=comp141910_c1_seq1 349 1 .;CDS_Target=comp141910_c1_seq1 347 294 .;locus=RLOC_00004759
ChrX	stalkie_big_nohaplotig	exon	89410552	89410900	100	-	.	Parent=comp141910_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	89410554	89410607	.	-	0	Parent=comp141910_c1_seq1.mrna1
ChrX	gffcl	locus	89422764	89450363	.	-	.	ID=RLOC_00004760;geneIDs=FBgn0003346.1.path1;transcripts=FBgn0003346.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89422764	89450363	.	-	.	ID=FBgn0003346.1.mrna1;geneID=FBgn0003346.1.path1;Name=FBgn0003346.1;Dir=sensecoverage=100.0;identity=96.2;matches=1864;mismatches=2;indels=72;unknowns=0;locus=RLOC_00004760
ChrX	stalkie_big_nohaplotig	exon	89422764	89423081	100	-	.	Parent=FBgn0003346.1.mrna1;Target=FBgn0003346.1 1621 1938 +
ChrX	stalkie_big_nohaplotig	exon	89423146	89423388	99	-	.	Parent=FBgn0003346.1.mrna1;Target=FBgn0003346.1 1378 1620 +
ChrX	stalkie_big_nohaplotig	exon	89423455	89423549	56	-	.	Parent=FBgn0003346.1.mrna1;Target=FBgn0003346.1 1211 1377 +
ChrX	stalkie_big_nohaplotig	exon	89427058	89427268	100	-	.	Parent=FBgn0003346.1.mrna1;Target=FBgn0003346.1 1000 1210 +
ChrX	stalkie_big_nohaplotig	exon	89427337	89427538	100	-	.	Parent=FBgn0003346.1.mrna1;Target=FBgn0003346.1 798 999 +
ChrX	stalkie_big_nohaplotig	exon	89427604	89428285	100	-	.	Parent=FBgn0003346.1.mrna1;Target=FBgn0003346.1 116 797 +
ChrX	stalkie_big_nohaplotig	exon	89450249	89450363	99	-	.	Parent=FBgn0003346.1.mrna1;Target=FBgn0003346.1 1 115 +
ChrX	stalkie_big_nohaplotig	CDS	89422764	89423081	.	-	0	Parent=FBgn0003346.1.mrna1;Target=FBgn0003346.1 1621 1938 +
ChrX	stalkie_big_nohaplotig	CDS	89423146	89423388	.	-	0	Parent=FBgn0003346.1.mrna1;Target=FBgn0003346.1 1378 1620 +
ChrX	stalkie_big_nohaplotig	CDS	89423455	89423549	.	-	2	Parent=FBgn0003346.1.mrna1;Target=FBgn0003346.1 1211 1377 +
ChrX	stalkie_big_nohaplotig	CDS	89427058	89427268	.	-	0	Parent=FBgn0003346.1.mrna1;Target=FBgn0003346.1 1000 1210 +
ChrX	stalkie_big_nohaplotig	CDS	89427337	89427538	.	-	1	Parent=FBgn0003346.1.mrna1;Target=FBgn0003346.1 798 999 +
ChrX	stalkie_big_nohaplotig	CDS	89427604	89428285	.	-	2	Parent=FBgn0003346.1.mrna1;Target=FBgn0003346.1 116 797 +
ChrX	stalkie_big_nohaplotig	CDS	89450249	89450363	.	-	0	Parent=FBgn0003346.1.mrna1;Target=FBgn0003346.1 1 115 +
ChrX	gffcl	locus	89429530	89454866	.	+	.	ID=RLOC_00004761;geneIDs=FBgn0024230.1.path1,comp146075_c0_seq1.path1;transcripts=FBgn0024230.1.mrna1,comp146075_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89429530	89453769	.	+	.	ID=FBgn0024230.1.mrna1;geneID=FBgn0024230.1.path1;Name=FBgn0024230.1;Dir=sensecoverage=100.0;identity=100.0;matches=1116;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004761
ChrX	stalkie_big_nohaplotig	exon	89429530	89429698	100	+	.	Parent=FBgn0024230.1.mrna1;Target=FBgn0024230.1 1 169 +
ChrX	stalkie_big_nohaplotig	exon	89429758	89430017	100	+	.	Parent=FBgn0024230.1.mrna1;Target=FBgn0024230.1 170 429 +
ChrX	stalkie_big_nohaplotig	exon	89430093	89430178	100	+	.	Parent=FBgn0024230.1.mrna1;Target=FBgn0024230.1 430 515 +
ChrX	stalkie_big_nohaplotig	exon	89430243	89430381	100	+	.	Parent=FBgn0024230.1.mrna1;Target=FBgn0024230.1 516 654 +
ChrX	stalkie_big_nohaplotig	exon	89452351	89452448	100	+	.	Parent=FBgn0024230.1.mrna1;Target=FBgn0024230.1 655 752 +
ChrX	stalkie_big_nohaplotig	exon	89452519	89452641	100	+	.	Parent=FBgn0024230.1.mrna1;Target=FBgn0024230.1 753 875 +
ChrX	stalkie_big_nohaplotig	exon	89453529	89453769	100	+	.	Parent=FBgn0024230.1.mrna1;Target=FBgn0024230.1 876 1116 +
ChrX	stalkie_big_nohaplotig	CDS	89429530	89429698	.	+	0	Parent=FBgn0024230.1.mrna1;Target=FBgn0024230.1 1 169 +
ChrX	stalkie_big_nohaplotig	CDS	89429758	89430017	.	+	2	Parent=FBgn0024230.1.mrna1;Target=FBgn0024230.1 170 429 +
ChrX	stalkie_big_nohaplotig	CDS	89430093	89430178	.	+	0	Parent=FBgn0024230.1.mrna1;Target=FBgn0024230.1 430 515 +
ChrX	stalkie_big_nohaplotig	CDS	89430243	89430381	.	+	1	Parent=FBgn0024230.1.mrna1;Target=FBgn0024230.1 516 654 +
ChrX	stalkie_big_nohaplotig	CDS	89452351	89452448	.	+	0	Parent=FBgn0024230.1.mrna1;Target=FBgn0024230.1 655 752 +
ChrX	stalkie_big_nohaplotig	CDS	89452519	89452641	.	+	1	Parent=FBgn0024230.1.mrna1;Target=FBgn0024230.1 753 875 +
ChrX	stalkie_big_nohaplotig	CDS	89453529	89453769	.	+	1	Parent=FBgn0024230.1.mrna1;Target=FBgn0024230.1 876 1116 +
ChrX	stalkie_big_nohaplotig	mRNA	89450783	89454866	.	+	.	ID=comp146075_c0_seq1.mrna1;geneID=comp146075_c0_seq1.path1;Name=comp146075_c0_seq1;Dir=sensecoverage=95.2;identity=99.9;matches=2860;mismatches=3;indels=0;unknowns=0;locus=RLOC_00004761
ChrX	stalkie_big_nohaplotig	exon	89450783	89451601	99	+	.	Parent=comp146075_c0_seq1.mrna1;Target=comp146075_c0_seq1 146 964 +
ChrX	stalkie_big_nohaplotig	exon	89451661	89451920	100	+	.	Parent=comp146075_c0_seq1.mrna1;Target=comp146075_c0_seq1 965 1224 +
ChrX	stalkie_big_nohaplotig	exon	89451996	89452081	100	+	.	Parent=comp146075_c0_seq1.mrna1;Target=comp146075_c0_seq1 1225 1310 +
ChrX	stalkie_big_nohaplotig	exon	89452146	89452284	100	+	.	Parent=comp146075_c0_seq1.mrna1;Target=comp146075_c0_seq1 1311 1449 +
ChrX	stalkie_big_nohaplotig	exon	89452351	89452448	100	+	.	Parent=comp146075_c0_seq1.mrna1;Target=comp146075_c0_seq1 1450 1547 +
ChrX	stalkie_big_nohaplotig	exon	89452519	89452641	100	+	.	Parent=comp146075_c0_seq1.mrna1;Target=comp146075_c0_seq1 1548 1670 +
ChrX	stalkie_big_nohaplotig	exon	89453529	89454866	100	+	.	Parent=comp146075_c0_seq1.mrna1;Target=comp146075_c0_seq1 1671 3008 +
ChrX	stalkie_big_nohaplotig	CDS	89451454	89451601	.	+	0	Parent=comp146075_c0_seq1.mrna1;Target=comp146075_c0_seq1 817 964 +
ChrX	stalkie_big_nohaplotig	CDS	89451661	89451920	.	+	2	Parent=comp146075_c0_seq1.mrna1;Target=comp146075_c0_seq1 965 1224 +
ChrX	stalkie_big_nohaplotig	CDS	89451996	89452081	.	+	0	Parent=comp146075_c0_seq1.mrna1;Target=comp146075_c0_seq1 1225 1310 +
ChrX	stalkie_big_nohaplotig	CDS	89452146	89452284	.	+	1	Parent=comp146075_c0_seq1.mrna1;Target=comp146075_c0_seq1 1311 1449 +
ChrX	stalkie_big_nohaplotig	CDS	89452351	89452448	.	+	0	Parent=comp146075_c0_seq1.mrna1;Target=comp146075_c0_seq1 1450 1547 +
ChrX	stalkie_big_nohaplotig	CDS	89452519	89452641	.	+	1	Parent=comp146075_c0_seq1.mrna1;Target=comp146075_c0_seq1 1548 1670 +
ChrX	stalkie_big_nohaplotig	CDS	89453529	89453772	.	+	1	Parent=comp146075_c0_seq1.mrna1;Target=comp146075_c0_seq1 1671 1914 +
ChrX	gffcl	locus	89465185	89471676	.	+	.	ID=RLOC_00004762;geneIDs=comp144002_c0_seq1.path1;transcripts=comp144002_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89465185	89471676	.	+	.	ID=comp144002_c0_seq1.mrna1;geneID=comp144002_c0_seq1.path1;Name=comp144002_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=550;mismatches=0;indels=0;unknowns=0;Target=comp144002_c0_seq1 425 502 .;locus=RLOC_00004762
ChrX	stalkie_big_nohaplotig	exon	89465185	89465439	100	+	.	Parent=comp144002_c0_seq1.mrna1;Target=comp144002_c0_seq1 296 550 -
ChrX	stalkie_big_nohaplotig	exon	89471382	89471676	100	+	.	Parent=comp144002_c0_seq1.mrna1;Target=comp144002_c0_seq1 1 295 -
ChrX	stalkie_big_nohaplotig	CDS	89465233	89465310	.	+	0	Parent=comp144002_c0_seq1.mrna1
ChrX	gffcl	locus	89478231	89505299	.	+	.	ID=RLOC_00004763;geneIDs=FBgn0032783.1.path1;transcripts=FBgn0032783.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89478231	89505299	.	+	.	ID=FBgn0032783.1.mrna1;geneID=FBgn0032783.1.path1;Name=FBgn0032783.1;Dir=sensecoverage=100.0;identity=100.0;matches=996;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004763
ChrX	stalkie_big_nohaplotig	exon	89478231	89478306	100	+	.	Parent=FBgn0032783.1.mrna1;Target=FBgn0032783.1 1 76 +
ChrX	stalkie_big_nohaplotig	exon	89493681	89493860	100	+	.	Parent=FBgn0032783.1.mrna1;Target=FBgn0032783.1 77 256 +
ChrX	stalkie_big_nohaplotig	exon	89501508	89501602	100	+	.	Parent=FBgn0032783.1.mrna1;Target=FBgn0032783.1 257 351 +
ChrX	stalkie_big_nohaplotig	exon	89504582	89504735	100	+	.	Parent=FBgn0032783.1.mrna1;Target=FBgn0032783.1 352 505 +
ChrX	stalkie_big_nohaplotig	exon	89504809	89505299	100	+	.	Parent=FBgn0032783.1.mrna1;Target=FBgn0032783.1 506 996 +
ChrX	stalkie_big_nohaplotig	CDS	89478231	89478306	.	+	0	Parent=FBgn0032783.1.mrna1;Target=FBgn0032783.1 1 76 +
ChrX	stalkie_big_nohaplotig	CDS	89493681	89493860	.	+	2	Parent=FBgn0032783.1.mrna1;Target=FBgn0032783.1 77 256 +
ChrX	stalkie_big_nohaplotig	CDS	89501508	89501602	.	+	2	Parent=FBgn0032783.1.mrna1;Target=FBgn0032783.1 257 351 +
ChrX	stalkie_big_nohaplotig	CDS	89504582	89504735	.	+	0	Parent=FBgn0032783.1.mrna1;Target=FBgn0032783.1 352 505 +
ChrX	stalkie_big_nohaplotig	CDS	89504809	89505299	.	+	2	Parent=FBgn0032783.1.mrna1;Target=FBgn0032783.1 506 996 +
ChrX	gffcl	locus	89489332	89490039	.	-	.	ID=RLOC_00004764;geneIDs=comp1375750_c0_seq1.path1;transcripts=comp1375750_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89489332	89490039	.	-	.	ID=comp1375750_c0_seq1.mrna1;geneID=comp1375750_c0_seq1.path1;Name=comp1375750_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=702;mismatches=6;indels=1;unknowns=0;Target=comp1375750_c0_seq1 709 1 .;CDS_Target=comp1375750_c0_seq1 271 104 .;locus=RLOC_00004764
ChrX	stalkie_big_nohaplotig	exon	89489332	89490039	99	-	.	Parent=comp1375750_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	89489769	89489936	.	-	0	Parent=comp1375750_c0_seq1.mrna1
ChrX	gffcl	locus	89509515	89509904	.	+	.	ID=RLOC_00004765;geneIDs=comp135014_c1_seq1.path1;transcripts=comp135014_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89509515	89509904	.	+	.	ID=comp135014_c1_seq1.mrna1;geneID=comp135014_c1_seq1.path1;Name=comp135014_c1_seq1;Dir=indeterminatecoverage=96.5;identity=100.0;matches=390;mismatches=0;indels=0;unknowns=0;Target=comp135014_c1_seq1 404 15 .;CDS_Target=comp135014_c1_seq1 393 130 .;locus=RLOC_00004765
ChrX	stalkie_big_nohaplotig	exon	89509515	89509904	100	+	.	Parent=comp135014_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	89509630	89509893	.	+	0	Parent=comp135014_c1_seq1.mrna1
ChrX	gffcl	locus	89512764	89526011	.	-	.	ID=RLOC_00004766;geneIDs=FBgn0032782.1.path1;transcripts=FBgn0032782.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89512764	89526011	.	-	.	ID=FBgn0032782.1.mrna1;geneID=FBgn0032782.1.path1;Name=FBgn0032782.1;Dir=sensecoverage=99.1;identity=100.0;matches=761;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004766
ChrX	stalkie_big_nohaplotig	exon	89512764	89513120	100	-	.	Parent=FBgn0032782.1.mrna1;Target=FBgn0032782.1 412 768 +
ChrX	stalkie_big_nohaplotig	exon	89513179	89513373	100	-	.	Parent=FBgn0032782.1.mrna1;Target=FBgn0032782.1 217 411 +
ChrX	stalkie_big_nohaplotig	exon	89525803	89526011	100	-	.	Parent=FBgn0032782.1.mrna1;Target=FBgn0032782.1 8 216 +
ChrX	stalkie_big_nohaplotig	CDS	89512764	89513120	.	-	0	Parent=FBgn0032782.1.mrna1;Target=FBgn0032782.1 412 768 +
ChrX	stalkie_big_nohaplotig	CDS	89513179	89513373	.	-	0	Parent=FBgn0032782.1.mrna1;Target=FBgn0032782.1 217 411 +
ChrX	stalkie_big_nohaplotig	CDS	89525803	89526009	.	-	0	Parent=FBgn0032782.1.mrna1;Target=FBgn0032782.1 10 216 +
ChrX	gffcl	locus	89520383	89521136	.	-	.	ID=RLOC_00004767;geneIDs=comp147182_c4_seq1.path2;transcripts=comp147182_c4_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	89520383	89521136	.	-	.	ID=comp147182_c4_seq1.mrna2;geneID=comp147182_c4_seq1.path2;Name=comp147182_c4_seq1;Dir=indeterminatecoverage=92.2;identity=98.1;matches=740;mismatches=14;indels=0;unknowns=0;Target=comp147182_c4_seq1 818 65 .;CDS_Target=comp147182_c4_seq1 660 514 .;locus=RLOC_00004767
ChrX	stalkie_big_nohaplotig	exon	89520383	89521136	98	-	.	Parent=comp147182_c4_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	89520541	89520687	.	-	0	Parent=comp147182_c4_seq1.mrna2
ChrX	gffcl	locus	89521455	89521868	.	+	.	ID=RLOC_00004768;geneIDs=comp85255_c0_seq1.path1;transcripts=comp85255_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89521455	89521868	.	+	.	ID=comp85255_c0_seq1.mrna1;geneID=comp85255_c0_seq1.path1;Name=comp85255_c0_seq1;Dir=indeterminatecoverage=88.5;identity=100.0;matches=414;mismatches=0;indels=0;unknowns=0;Target=comp85255_c0_seq1 414 1 .;CDS_Target=comp85255_c0_seq1 144 1 .;locus=RLOC_00004768
ChrX	stalkie_big_nohaplotig	exon	89521455	89521868	100	+	.	Parent=comp85255_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	89521455	89521598	.	+	0	Parent=comp85255_c0_seq1.mrna1
ChrX	gffcl	locus	89604171	89606590	.	+	.	ID=RLOC_00004769;geneIDs=FBgn0261239.1.path1;transcripts=FBgn0261239.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89604171	89606590	.	+	.	ID=FBgn0261239.1.mrna1;geneID=FBgn0261239.1.path1;Name=FBgn0261239.1;Dir=sensecoverage=99.7;identity=100.0;matches=2296;mismatches=0;indels=1;unknowns=0;locus=RLOC_00004769
ChrX	stalkie_big_nohaplotig	exon	89604171	89606036	100	+	.	Parent=FBgn0261239.1.mrna1;Target=FBgn0261239.1 1 1866 +
ChrX	stalkie_big_nohaplotig	exon	89606099	89606377	100	+	.	Parent=FBgn0261239.1.mrna1;Target=FBgn0261239.1 1867 2145 +
ChrX	stalkie_big_nohaplotig	exon	89606440	89606590	99	+	.	Parent=FBgn0261239.1.mrna1;Target=FBgn0261239.1 2146 2297 +
ChrX	stalkie_big_nohaplotig	CDS	89604171	89606036	.	+	0	Parent=FBgn0261239.1.mrna1;Target=FBgn0261239.1 1 1866 +
ChrX	stalkie_big_nohaplotig	CDS	89606099	89606377	.	+	0	Parent=FBgn0261239.1.mrna1;Target=FBgn0261239.1 1867 2145 +
ChrX	stalkie_big_nohaplotig	CDS	89606440	89606588	.	+	0	Parent=FBgn0261239.1.mrna1;Target=FBgn0261239.1 2146 2295 +
ChrX	gffcl	locus	89610216	89610660	.	-	.	ID=RLOC_00004770;geneIDs=comp117272_c0_seq1.path1;transcripts=comp117272_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89610216	89610660	.	-	.	ID=comp117272_c0_seq1.mrna1;geneID=comp117272_c0_seq1.path1;Name=comp117272_c0_seq1;Dir=indeterminatecoverage=87.2;identity=98.7;matches=443;mismatches=2;indels=4;unknowns=0;Target=comp117272_c0_seq1 449 1 .;CDS_Target=comp117272_c0_seq1 244 209 .;locus=RLOC_00004770
ChrX	stalkie_big_nohaplotig	exon	89610216	89610660	98	-	.	Parent=comp117272_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	89610420	89610454	.	-	0	Parent=comp117272_c0_seq1.mrna1
ChrX	gffcl	locus	89611283	89613354	.	+	.	ID=RLOC_00004771;geneIDs=comp156504_c0_seq1.path1;transcripts=comp156504_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89611283	89613354	.	+	.	ID=comp156504_c0_seq1.mrna1;geneID=comp156504_c0_seq1.path1;Name=comp156504_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=1347;mismatches=2;indels=5;unknowns=0;Target=comp156504_c0_seq1 748 939 +;locus=RLOC_00004771
ChrX	stalkie_big_nohaplotig	exon	89611283	89611569	100	+	.	Parent=comp156504_c0_seq1.mrna1;Target=comp156504_c0_seq1 1 287 +
ChrX	stalkie_big_nohaplotig	exon	89611645	89612316	98	+	.	Parent=comp156504_c0_seq1.mrna1;Target=comp156504_c0_seq1 288 964 +
ChrX	stalkie_big_nohaplotig	exon	89612965	89613354	100	+	.	Parent=comp156504_c0_seq1.mrna1;Target=comp156504_c0_seq1 965 1354 +
ChrX	stalkie_big_nohaplotig	CDS	89612100	89612291	.	+	0	Parent=comp156504_c0_seq1.mrna1
ChrX	gffcl	locus	89616065	89616711	.	+	.	ID=RLOC_00004772;geneIDs=comp118907_c0_seq1.path1;transcripts=comp118907_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89616065	89616711	.	+	.	ID=comp118907_c0_seq1.mrna1;geneID=comp118907_c0_seq1.path1;Name=comp118907_c0_seq1;Dir=indeterminatecoverage=95.3;identity=99.7;matches=646;mismatches=1;indels=1;unknowns=0;Target=comp118907_c0_seq1 680 33 .;CDS_Target=comp118907_c0_seq1 287 219 .;locus=RLOC_00004772
ChrX	stalkie_big_nohaplotig	exon	89616065	89616711	99	+	.	Parent=comp118907_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	89616251	89616319	.	+	0	Parent=comp118907_c0_seq1.mrna1
ChrX	gffcl	locus	89800163	89803909	.	+	.	ID=RLOC_00004774;geneIDs=FBgn0031738.1.path1;transcripts=FBgn0031738.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89800163	89803909	.	+	.	ID=FBgn0031738.1.mrna1;geneID=FBgn0031738.1.path1;Name=FBgn0031738.1;Dir=sensecoverage=100.0;identity=99.9;matches=1499;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004774
ChrX	stalkie_big_nohaplotig	exon	89800163	89800228	100	+	.	Parent=FBgn0031738.1.mrna1;Target=FBgn0031738.1 1 66 +
ChrX	stalkie_big_nohaplotig	exon	89800292	89800791	100	+	.	Parent=FBgn0031738.1.mrna1;Target=FBgn0031738.1 67 566 +
ChrX	stalkie_big_nohaplotig	exon	89800868	89801296	99	+	.	Parent=FBgn0031738.1.mrna1;Target=FBgn0031738.1 567 995 +
ChrX	stalkie_big_nohaplotig	exon	89801360	89801669	100	+	.	Parent=FBgn0031738.1.mrna1;Target=FBgn0031738.1 996 1305 +
ChrX	stalkie_big_nohaplotig	exon	89803715	89803909	100	+	.	Parent=FBgn0031738.1.mrna1;Target=FBgn0031738.1 1306 1500 +
ChrX	stalkie_big_nohaplotig	CDS	89800163	89800228	.	+	0	Parent=FBgn0031738.1.mrna1;Target=FBgn0031738.1 1 66 +
ChrX	stalkie_big_nohaplotig	CDS	89800292	89800791	.	+	0	Parent=FBgn0031738.1.mrna1;Target=FBgn0031738.1 67 566 +
ChrX	stalkie_big_nohaplotig	CDS	89800868	89801296	.	+	1	Parent=FBgn0031738.1.mrna1;Target=FBgn0031738.1 567 995 +
ChrX	stalkie_big_nohaplotig	CDS	89801360	89801669	.	+	1	Parent=FBgn0031738.1.mrna1;Target=FBgn0031738.1 996 1305 +
ChrX	stalkie_big_nohaplotig	CDS	89803715	89803909	.	+	0	Parent=FBgn0031738.1.mrna1;Target=FBgn0031738.1 1306 1500 +
ChrX	gffcl	locus	89804551	89891682	.	.	.	ID=RLOC_00004775;geneIDs=comp112931_c0_seq1.path1,comp119319_c0_seq1.path1,comp150936_c0_seq1.path1;transcripts=comp119319_c0_seq1.mrna1,comp112931_c0_seq1.mrna1,comp150936_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89804551	89891682	.	-	.	ID=comp119319_c0_seq1.mrna1;geneID=comp119319_c0_seq1.path1;Name=comp119319_c0_seq1;Dir=indeterminatecoverage=96.6;identity=95.5;matches=470;mismatches=12;indels=10;unknowns=0;Target=comp119319_c0_seq1 32 21 .;locus=RLOC_00004775
ChrX	stalkie_big_nohaplotig	exon	89804551	89804915	100	-	.	Parent=comp119319_c0_seq1.mrna1;Target=comp119319_c0_seq1 533 169 .
ChrX	stalkie_big_nohaplotig	exon	89806074	89806081	100	-	.	Parent=comp119319_c0_seq1.mrna1;Target=comp119319_c0_seq1 168 161 .
ChrX	stalkie_big_nohaplotig	exon	89807484	89807513	66	-	.	Parent=comp119319_c0_seq1.mrna1;Target=comp119319_c0_seq1 160 131 .
ChrX	stalkie_big_nohaplotig	exon	89808284	89808289	100	-	.	Parent=comp119319_c0_seq1.mrna1;Target=comp119319_c0_seq1 130 125 .
ChrX	stalkie_big_nohaplotig	exon	89814890	89814913	58	-	.	Parent=comp119319_c0_seq1.mrna1;Target=comp119319_c0_seq1 124 109 .
ChrX	stalkie_big_nohaplotig	exon	89828241	89828243	100	-	.	Parent=comp119319_c0_seq1.mrna1;Target=comp119319_c0_seq1 108 106 .
ChrX	stalkie_big_nohaplotig	exon	89846485	89846492	100	-	.	Parent=comp119319_c0_seq1.mrna1;Target=comp119319_c0_seq1 105 98 .
ChrX	stalkie_big_nohaplotig	exon	89850443	89850450	100	-	.	Parent=comp119319_c0_seq1.mrna1;Target=comp119319_c0_seq1 63 56 .
ChrX	stalkie_big_nohaplotig	exon	89874141	89874142	100	-	.	Parent=comp119319_c0_seq1.mrna1;Target=comp119319_c0_seq1 55 54 .
ChrX	stalkie_big_nohaplotig	exon	89881468	89881471	100	-	.	Parent=comp119319_c0_seq1.mrna1;Target=comp119319_c0_seq1 53 50 .
ChrX	stalkie_big_nohaplotig	exon	89886704	89886707	100	-	.	Parent=comp119319_c0_seq1.mrna1;Target=comp119319_c0_seq1 49 46 .
ChrX	stalkie_big_nohaplotig	exon	89886787	89886790	100	-	.	Parent=comp119319_c0_seq1.mrna1;Target=comp119319_c0_seq1 45 42 .
ChrX	stalkie_big_nohaplotig	exon	89891187	89891191	100	-	.	Parent=comp119319_c0_seq1.mrna1;Target=comp119319_c0_seq1 41 37 .
ChrX	stalkie_big_nohaplotig	exon	89891663	89891682	90	-	.	Parent=comp119319_c0_seq1.mrna1;Target=comp119319_c0_seq1 36 19 .
ChrX	stalkie_big_nohaplotig	CDS	89891667	89891680	.	-	0	Parent=comp119319_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89804896	89805755	.	+	.	ID=comp112931_c0_seq1.mrna1;geneID=comp112931_c0_seq1.path1;Name=comp112931_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.9;matches=859;mismatches=1;indels=0;unknowns=0;Target=comp112931_c0_seq1 868 9 .;CDS_Target=comp112931_c0_seq1 112 29 .;locus=RLOC_00004775
ChrX	stalkie_big_nohaplotig	exon	89804896	89805755	99	+	.	Parent=comp112931_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	89804916	89804999	.	+	0	Parent=comp112931_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89806048	89807275	.	+	.	ID=comp150936_c0_seq1.mrna1;geneID=comp150936_c0_seq1.path1;Name=comp150936_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=1228;mismatches=0;indels=0;unknowns=0;Target=comp150936_c0_seq1 1231 4 .;CDS_Target=comp150936_c0_seq1 909 646 .;locus=RLOC_00004775
ChrX	stalkie_big_nohaplotig	exon	89806048	89807275	100	+	.	Parent=comp150936_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	89806690	89806953	.	+	0	Parent=comp150936_c0_seq1.mrna1
ChrX	gffcl	locus	89809414	89809831	.	-	.	ID=RLOC_00004776;geneIDs=comp145804_c0_seq1.path1;transcripts=comp145804_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89809414	89809831	.	-	.	ID=comp145804_c0_seq1.mrna1;geneID=comp145804_c0_seq1.path1;Name=comp145804_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.8;matches=417;mismatches=1;indels=0;unknowns=0;Target=comp145804_c0_seq1 420 3 .;CDS_Target=comp145804_c0_seq1 280 167 .;locus=RLOC_00004776
ChrX	stalkie_big_nohaplotig	exon	89809414	89809831	99	-	.	Parent=comp145804_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	89809554	89809667	.	-	0	Parent=comp145804_c0_seq1.mrna1
ChrX	gffcl	locus	89815949	89822099	.	+	.	ID=RLOC_00004777;geneIDs=FBgn0031738.2.path1,comp160292_c1_seq1.path1;transcripts=comp160292_c1_seq1.mrna1,FBgn0031738.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89815949	89819857	.	+	.	ID=comp160292_c1_seq1.mrna1;geneID=comp160292_c1_seq1.path1;Name=comp160292_c1_seq1;Dir=sensecoverage=81.6;identity=93.5;matches=2134;mismatches=123;indels=25;unknowns=0;locus=RLOC_00004777
ChrX	stalkie_big_nohaplotig	exon	89815949	89816726	99	+	.	Parent=comp160292_c1_seq1.mrna1;Target=comp160292_c1_seq1 1 779 +
ChrX	stalkie_big_nohaplotig	exon	89818204	89818517	93	+	.	Parent=comp160292_c1_seq1.mrna1;Target=comp160292_c1_seq1 780 1114 +
ChrX	stalkie_big_nohaplotig	exon	89818582	89819009	100	+	.	Parent=comp160292_c1_seq1.mrna1;Target=comp160292_c1_seq1 1115 1542 +
ChrX	stalkie_big_nohaplotig	exon	89819064	89819489	83	+	.	Parent=comp160292_c1_seq1.mrna1;Target=comp160292_c1_seq1 1543 1971 +
ChrX	stalkie_big_nohaplotig	exon	89819547	89819857	82	+	.	Parent=comp160292_c1_seq1.mrna1;Target=comp160292_c1_seq1 1972 2282 +
ChrX	stalkie_big_nohaplotig	CDS	89818287	89818517	.	+	0	Parent=comp160292_c1_seq1.mrna1;Target=comp160292_c1_seq1 884 1114 +
ChrX	stalkie_big_nohaplotig	CDS	89818582	89819009	.	+	0	Parent=comp160292_c1_seq1.mrna1;Target=comp160292_c1_seq1 1115 1542 +
ChrX	stalkie_big_nohaplotig	CDS	89819064	89819489	.	+	1	Parent=comp160292_c1_seq1.mrna1;Target=comp160292_c1_seq1 1543 1971 +
ChrX	stalkie_big_nohaplotig	CDS	89819547	89819856	.	+	1	Parent=comp160292_c1_seq1.mrna1;Target=comp160292_c1_seq1 1972 2281 +
ChrX	stalkie_big_nohaplotig	mRNA	89818260	89822099	.	+	.	ID=FBgn0031738.2.mrna1;geneID=FBgn0031738.2.path1;Name=FBgn0031738.2;Dir=sensecoverage=100.0;identity=99.9;matches=1622;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004777
ChrX	stalkie_big_nohaplotig	exon	89818260	89818517	99	+	.	Parent=FBgn0031738.2.mrna1;Target=FBgn0031738.2 1 258 +
ChrX	stalkie_big_nohaplotig	exon	89818582	89819009	100	+	.	Parent=FBgn0031738.2.mrna1;Target=FBgn0031738.2 259 686 +
ChrX	stalkie_big_nohaplotig	exon	89819064	89819489	100	+	.	Parent=FBgn0031738.2.mrna1;Target=FBgn0031738.2 687 1112 +
ChrX	stalkie_big_nohaplotig	exon	89819547	89819856	100	+	.	Parent=FBgn0031738.2.mrna1;Target=FBgn0031738.2 1113 1422 +
ChrX	stalkie_big_nohaplotig	exon	89821899	89822099	100	+	.	Parent=FBgn0031738.2.mrna1;Target=FBgn0031738.2 1423 1623 +
ChrX	stalkie_big_nohaplotig	CDS	89818260	89818517	.	+	0	Parent=FBgn0031738.2.mrna1;Target=FBgn0031738.2 1 258 +
ChrX	stalkie_big_nohaplotig	CDS	89818582	89819009	.	+	0	Parent=FBgn0031738.2.mrna1;Target=FBgn0031738.2 259 686 +
ChrX	stalkie_big_nohaplotig	CDS	89819064	89819489	.	+	1	Parent=FBgn0031738.2.mrna1;Target=FBgn0031738.2 687 1112 +
ChrX	stalkie_big_nohaplotig	CDS	89819547	89819856	.	+	1	Parent=FBgn0031738.2.mrna1;Target=FBgn0031738.2 1113 1422 +
ChrX	stalkie_big_nohaplotig	CDS	89821899	89822099	.	+	0	Parent=FBgn0031738.2.mrna1;Target=FBgn0031738.2 1423 1623 +
ChrX	gffcl	locus	89829814	89844083	.	+	.	ID=RLOC_00004778;geneIDs=FBgn0031737.1.path1,FBgn0031737.2.path1;transcripts=FBgn0031737.1.mrna1,FBgn0031737.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89829814	89840340	.	+	.	ID=FBgn0031737.1.mrna1;geneID=FBgn0031737.1.path1;Name=FBgn0031737.1;Dir=sensecoverage=100.0;identity=100.0;matches=735;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004778
ChrX	stalkie_big_nohaplotig	exon	89829814	89829886	100	+	.	Parent=FBgn0031737.1.mrna1;Target=FBgn0031737.1 1 73 +
ChrX	stalkie_big_nohaplotig	exon	89839679	89840340	100	+	.	Parent=FBgn0031737.1.mrna1;Target=FBgn0031737.1 74 735 +
ChrX	stalkie_big_nohaplotig	CDS	89829814	89829886	.	+	0	Parent=FBgn0031737.1.mrna1;Target=FBgn0031737.1 1 73 +
ChrX	stalkie_big_nohaplotig	CDS	89839679	89840340	.	+	2	Parent=FBgn0031737.1.mrna1;Target=FBgn0031737.1 74 735 +
ChrX	stalkie_big_nohaplotig	mRNA	89829814	89844083	.	+	.	ID=FBgn0031737.2.mrna1;geneID=FBgn0031737.2.path1;Name=FBgn0031737.2;Dir=sensecoverage=100.0;identity=100.0;matches=732;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004778
ChrX	stalkie_big_nohaplotig	exon	89829814	89829886	100	+	.	Parent=FBgn0031737.2.mrna1;Target=FBgn0031737.2 1 73 +
ChrX	stalkie_big_nohaplotig	exon	89843425	89844083	100	+	.	Parent=FBgn0031737.2.mrna1;Target=FBgn0031737.2 74 732 +
ChrX	stalkie_big_nohaplotig	CDS	89829814	89829886	.	+	0	Parent=FBgn0031737.2.mrna1;Target=FBgn0031737.2 1 73 +
ChrX	stalkie_big_nohaplotig	CDS	89843425	89844083	.	+	2	Parent=FBgn0031737.2.mrna1;Target=FBgn0031737.2 74 732 +
ChrX	gffcl	locus	89830368	90919982	.	-	.	ID=RLOC_00004779;geneIDs=comp142768_c0_seq1.path3;transcripts=comp142768_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	89830368	90919982	.	-	.	ID=comp142768_c0_seq1.mrna3;geneID=comp142768_c0_seq1.path3;Name=comp142768_c0_seq1;Dir=indeterminatecoverage=22.9;identity=84.2;matches=202;mismatches=37;indels=1;unknowns=0;Target=comp142768_c0_seq1 174 7 .;locus=RLOC_00004779
ChrX	stalkie_big_nohaplotig	exon	89830368	89830373	100	-	.	Parent=comp142768_c0_seq1.mrna3;Target=comp142768_c0_seq1 244 239 .
ChrX	stalkie_big_nohaplotig	exon	89836423	89836435	92	-	.	Parent=comp142768_c0_seq1.mrna3;Target=comp142768_c0_seq1 238 226 .
ChrX	stalkie_big_nohaplotig	exon	89839021	89839025	100	-	.	Parent=comp142768_c0_seq1.mrna3;Target=comp142768_c0_seq1 225 221 .
ChrX	stalkie_big_nohaplotig	exon	89844674	89844678	100	-	.	Parent=comp142768_c0_seq1.mrna3;Target=comp142768_c0_seq1 220 216 .
ChrX	stalkie_big_nohaplotig	exon	90919773	90919982	82	-	.	Parent=comp142768_c0_seq1.mrna3;Target=comp142768_c0_seq1 215 5 .
ChrX	stalkie_big_nohaplotig	CDS	90919814	90919980	.	-	0	Parent=comp142768_c0_seq1.mrna3
ChrX	gffcl	locus	89846607	89847089	.	-	.	ID=RLOC_00004780;geneIDs=comp159570_c0_seq1.path1;transcripts=comp159570_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89846607	89847089	.	-	.	ID=comp159570_c0_seq1.mrna1;geneID=comp159570_c0_seq1.path1;Name=comp159570_c0_seq1;Dir=indeterminatecoverage=94.7;identity=100.0;matches=483;mismatches=0;indels=0;unknowns=0;Target=comp159570_c0_seq1 510 28 .;CDS_Target=comp159570_c0_seq1 134 30 .;locus=RLOC_00004780
ChrX	stalkie_big_nohaplotig	exon	89846607	89847089	100	-	.	Parent=comp159570_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	89846983	89847087	.	-	0	Parent=comp159570_c0_seq1.mrna1
ChrX	gffcl	locus	89848505	89849067	.	+	.	ID=RLOC_00004781;geneIDs=comp143031_c0_seq1.path1;transcripts=comp143031_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89848505	89849067	.	+	.	ID=comp143031_c0_seq1.mrna1;geneID=comp143031_c0_seq1.path1;Name=comp143031_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=562;mismatches=1;indels=2;unknowns=0;Target=comp143031_c0_seq1 565 1 .;CDS_Target=comp143031_c0_seq1 367 254 .;locus=RLOC_00004781
ChrX	stalkie_big_nohaplotig	exon	89848505	89849067	99	+	.	Parent=comp143031_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	89848756	89848869	.	+	0	Parent=comp143031_c0_seq1.mrna1
ChrX	gffcl	locus	89849275	89849762	.	+	.	ID=RLOC_00004782;geneIDs=comp157651_c0_seq1.path1;transcripts=comp157651_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89849275	89849762	.	+	.	ID=comp157651_c0_seq1.mrna1;geneID=comp157651_c0_seq1.path1;Name=comp157651_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=483;mismatches=5;indels=1;unknowns=0;Target=comp157651_c0_seq1 489 1 .;CDS_Target=comp157651_c0_seq1 63 1 .;locus=RLOC_00004782
ChrX	stalkie_big_nohaplotig	exon	89849275	89849762	98	+	.	Parent=comp157651_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	89849275	89849337	.	+	0	Parent=comp157651_c0_seq1.mrna1
ChrX	gffcl	locus	89853914	89939237	.	-	.	ID=RLOC_00004783;geneIDs=FBgn0031736.1.path1;transcripts=FBgn0031736.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89853914	89939237	.	-	.	ID=FBgn0031736.1.mrna1;geneID=FBgn0031736.1.path1;Name=FBgn0031736.1;Dir=sensecoverage=100.0;identity=100.0;matches=1050;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004783
ChrX	stalkie_big_nohaplotig	exon	89853914	89854053	100	-	.	Parent=FBgn0031736.1.mrna1;Target=FBgn0031736.1 911 1050 +
ChrX	stalkie_big_nohaplotig	exon	89854130	89854317	100	-	.	Parent=FBgn0031736.1.mrna1;Target=FBgn0031736.1 723 910 +
ChrX	stalkie_big_nohaplotig	exon	89856049	89856320	100	-	.	Parent=FBgn0031736.1.mrna1;Target=FBgn0031736.1 451 722 +
ChrX	stalkie_big_nohaplotig	exon	89856393	89856791	100	-	.	Parent=FBgn0031736.1.mrna1;Target=FBgn0031736.1 52 450 +
ChrX	stalkie_big_nohaplotig	exon	89939187	89939237	100	-	.	Parent=FBgn0031736.1.mrna1;Target=FBgn0031736.1 1 51 +
ChrX	stalkie_big_nohaplotig	CDS	89853914	89854053	.	-	2	Parent=FBgn0031736.1.mrna1;Target=FBgn0031736.1 911 1050 +
ChrX	stalkie_big_nohaplotig	CDS	89854130	89854317	.	-	1	Parent=FBgn0031736.1.mrna1;Target=FBgn0031736.1 723 910 +
ChrX	stalkie_big_nohaplotig	CDS	89856049	89856320	.	-	0	Parent=FBgn0031736.1.mrna1;Target=FBgn0031736.1 451 722 +
ChrX	stalkie_big_nohaplotig	CDS	89856393	89856791	.	-	0	Parent=FBgn0031736.1.mrna1;Target=FBgn0031736.1 52 450 +
ChrX	stalkie_big_nohaplotig	CDS	89939187	89939237	.	-	0	Parent=FBgn0031736.1.mrna1;Target=FBgn0031736.1 1 51 +
ChrX	gffcl	locus	89891948	89893302	.	-	.	ID=RLOC_00004784;geneIDs=FBgn0031735.1.path1;transcripts=FBgn0031735.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89891948	89893302	.	-	.	ID=FBgn0031735.1.mrna1;geneID=FBgn0031735.1.path1;Name=FBgn0031735.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1355;mismatches=0;indels=1;unknowns=0;Target=FBgn0031735.1 1356 1 .;locus=RLOC_00004784
ChrX	stalkie_big_nohaplotig	exon	89891948	89893302	99	-	.	Parent=FBgn0031735.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	89891948	89893302	.	-	0	Parent=FBgn0031735.1.mrna1
ChrX	gffcl	locus	89897626	89898618	.	+	.	ID=RLOC_00004785;geneIDs=ORF1799.path1;transcripts=ORF1799.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89897626	89898618	.	+	.	ID=ORF1799.mrna1;geneID=ORF1799.path1;Name=ORF1799;Dir=indeterminatecoverage=100.0;identity=99.6;matches=989;mismatches=4;indels=0;unknowns=0;Target=ORF1799 993 1 .;locus=RLOC_00004785
ChrX	stalkie_big_nohaplotig	exon	89897626	89898618	99	+	.	Parent=ORF1799.mrna1
ChrX	stalkie_big_nohaplotig	CDS	89897626	89898618	.	+	0	Parent=ORF1799.mrna1
ChrX	gffcl	locus	89910896	89911960	.	+	.	ID=RLOC_00004786;geneIDs=comp153044_c0_seq1.path1;transcripts=comp153044_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89910896	89911960	.	+	.	ID=comp153044_c0_seq1.mrna1;geneID=comp153044_c0_seq1.path1;Name=comp153044_c0_seq1;Dir=antisensecoverage=98.2;identity=99.7;matches=965;mismatches=3;indels=0;unknowns=0;Target=comp153044_c0_seq1 529 657 .;locus=RLOC_00004786
ChrX	stalkie_big_nohaplotig	exon	89910896	89911074	99	+	.	Parent=comp153044_c0_seq1.mrna1;Target=comp153044_c0_seq1 808 986 -
ChrX	stalkie_big_nohaplotig	exon	89911172	89911960	99	+	.	Parent=comp153044_c0_seq1.mrna1;Target=comp153044_c0_seq1 19 807 -
ChrX	stalkie_big_nohaplotig	CDS	89911322	89911450	.	+	0	Parent=comp153044_c0_seq1.mrna1
ChrX	gffcl	locus	89942698	89975362	.	+	.	ID=RLOC_00004787;geneIDs=FBgn0024191.1.path1;transcripts=FBgn0024191.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89942698	89975362	.	+	.	ID=FBgn0024191.1.mrna1;geneID=FBgn0024191.1.path1;Name=FBgn0024191.1;Dir=sensecoverage=100.0;identity=100.0;matches=2511;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004787
ChrX	stalkie_big_nohaplotig	exon	89942698	89942842	100	+	.	Parent=FBgn0024191.1.mrna1;Target=FBgn0024191.1 1 145 +
ChrX	stalkie_big_nohaplotig	exon	89942903	89943414	100	+	.	Parent=FBgn0024191.1.mrna1;Target=FBgn0024191.1 146 657 +
ChrX	stalkie_big_nohaplotig	exon	89971081	89971256	100	+	.	Parent=FBgn0024191.1.mrna1;Target=FBgn0024191.1 658 833 +
ChrX	stalkie_big_nohaplotig	exon	89973553	89974652	100	+	.	Parent=FBgn0024191.1.mrna1;Target=FBgn0024191.1 834 1933 +
ChrX	stalkie_big_nohaplotig	exon	89974715	89975160	100	+	.	Parent=FBgn0024191.1.mrna1;Target=FBgn0024191.1 1934 2379 +
ChrX	stalkie_big_nohaplotig	exon	89975231	89975362	100	+	.	Parent=FBgn0024191.1.mrna1;Target=FBgn0024191.1 2380 2511 +
ChrX	stalkie_big_nohaplotig	CDS	89942698	89942842	.	+	0	Parent=FBgn0024191.1.mrna1;Target=FBgn0024191.1 1 145 +
ChrX	stalkie_big_nohaplotig	CDS	89942903	89943414	.	+	2	Parent=FBgn0024191.1.mrna1;Target=FBgn0024191.1 146 657 +
ChrX	stalkie_big_nohaplotig	CDS	89971081	89971256	.	+	0	Parent=FBgn0024191.1.mrna1;Target=FBgn0024191.1 658 833 +
ChrX	stalkie_big_nohaplotig	CDS	89973553	89974652	.	+	1	Parent=FBgn0024191.1.mrna1;Target=FBgn0024191.1 834 1933 +
ChrX	stalkie_big_nohaplotig	CDS	89974715	89975160	.	+	2	Parent=FBgn0024191.1.mrna1;Target=FBgn0024191.1 1934 2379 +
ChrX	stalkie_big_nohaplotig	CDS	89975231	89975362	.	+	0	Parent=FBgn0024191.1.mrna1;Target=FBgn0024191.1 2380 2511 +
ChrX	gffcl	locus	89946706	89977553	.	+	.	ID=RLOC_00004788;geneIDs=comp162329_c0_seq1.path1;transcripts=comp162329_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89946706	89977553	.	+	.	ID=comp162329_c0_seq1.mrna1;geneID=comp162329_c0_seq1.path1;Name=comp162329_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=1797;mismatches=19;indels=8;unknowns=0;Target=comp162329_c0_seq1 1455 1243 .;locus=RLOC_00004788
ChrX	stalkie_big_nohaplotig	exon	89946706	89947678	98	+	.	Parent=comp162329_c0_seq1.mrna1;Target=comp162329_c0_seq1 978 1 .
ChrX	stalkie_big_nohaplotig	exon	89976708	89977553	98	+	.	Parent=comp162329_c0_seq1.mrna1;Target=comp162329_c0_seq1 1821 979 .
ChrX	stalkie_big_nohaplotig	CDS	89976972	89977184	.	+	0	Parent=comp162329_c0_seq1.mrna1
ChrX	gffcl	locus	89948945	89949825	.	-	.	ID=RLOC_00004789;geneIDs=comp150286_c0_seq1.path1;transcripts=comp150286_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89948945	89949825	.	-	.	ID=comp150286_c0_seq1.mrna1;geneID=comp150286_c0_seq1.path1;Name=comp150286_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.3;matches=773;mismatches=13;indels=0;unknowns=0;Target=comp150286_c0_seq1 560 426 .;locus=RLOC_00004789
ChrX	stalkie_big_nohaplotig	exon	89948945	89948967	100	-	.	Parent=comp150286_c0_seq1.mrna1;Target=comp150286_c0_seq1 796 774 .
ChrX	stalkie_big_nohaplotig	exon	89949063	89949825	98	-	.	Parent=comp150286_c0_seq1.mrna1;Target=comp150286_c0_seq1 764 2 .
ChrX	stalkie_big_nohaplotig	CDS	89949267	89949401	.	-	0	Parent=comp150286_c0_seq1.mrna1
ChrX	gffcl	locus	89972484	89972965	.	-	.	ID=RLOC_00004790;geneIDs=comp152975_c0_seq1.path8;transcripts=comp152975_c0_seq1.mrna8
ChrX	stalkie_big_nohaplotig	mRNA	89972484	89972965	.	-	.	ID=comp152975_c0_seq1.mrna8;geneID=comp152975_c0_seq1.path8;Name=comp152975_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=477;mismatches=5;indels=0;unknowns=0;Target=comp152975_c0_seq1 482 1 .;CDS_Target=comp152975_c0_seq1 185 63 .;locus=RLOC_00004790
ChrX	stalkie_big_nohaplotig	exon	89972484	89972965	98	-	.	Parent=comp152975_c0_seq1.mrna8
ChrX	stalkie_big_nohaplotig	CDS	89972781	89972903	.	-	0	Parent=comp152975_c0_seq1.mrna8
ChrX	gffcl	locus	89979091	89987294	.	+	.	ID=RLOC_00004791;geneIDs=comp162052_c0_seq1.path1;transcripts=comp162052_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	89979091	89987294	.	+	.	ID=comp162052_c0_seq1.mrna1;geneID=comp162052_c0_seq1.path1;Name=comp162052_c0_seq1;Dir=antisensecoverage=99.1;identity=99.4;matches=2504;mismatches=10;indels=6;unknowns=0;locus=RLOC_00004791
ChrX	stalkie_big_nohaplotig	exon	89979091	89979888	98	+	.	Parent=comp162052_c0_seq1.mrna1;Target=comp162052_c0_seq1 1728 2530 -
ChrX	stalkie_big_nohaplotig	exon	89979968	89980391	99	+	.	Parent=comp162052_c0_seq1.mrna1;Target=comp162052_c0_seq1 1304 1727 -
ChrX	stalkie_big_nohaplotig	exon	89980454	89980882	99	+	.	Parent=comp162052_c0_seq1.mrna1;Target=comp162052_c0_seq1 874 1303 -
ChrX	stalkie_big_nohaplotig	exon	89980945	89981245	100	+	.	Parent=comp162052_c0_seq1.mrna1;Target=comp162052_c0_seq1 573 873 -
ChrX	stalkie_big_nohaplotig	exon	89986733	89987294	99	+	.	Parent=comp162052_c0_seq1.mrna1;Target=comp162052_c0_seq1 11 572 -
ChrX	stalkie_big_nohaplotig	CDS	89980060	89980391	.	+	0	Parent=comp162052_c0_seq1.mrna1;Target=comp162052_c0_seq1 1304 1635 .
ChrX	stalkie_big_nohaplotig	CDS	89980454	89980687	.	+	1	Parent=comp162052_c0_seq1.mrna1;Target=comp162052_c0_seq1 1069 1303 .
ChrX	gffcl	locus	90004637	90005118	.	-	.	ID=RLOC_00004792;geneIDs=comp117214_c0_seq1.path1;transcripts=comp117214_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90004637	90005118	.	-	.	ID=comp117214_c0_seq1.mrna1;geneID=comp117214_c0_seq1.path1;Name=comp117214_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=411;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004792
ChrX	stalkie_big_nohaplotig	exon	90004637	90004986	100	-	.	Parent=comp117214_c0_seq1.mrna1;Target=comp117214_c0_seq1 62 411 +
ChrX	stalkie_big_nohaplotig	exon	90005058	90005118	100	-	.	Parent=comp117214_c0_seq1.mrna1;Target=comp117214_c0_seq1 1 61 +
ChrX	stalkie_big_nohaplotig	CDS	90004852	90004986	.	-	0	Parent=comp117214_c0_seq1.mrna1;Target=comp117214_c0_seq1 62 196 +
ChrX	stalkie_big_nohaplotig	CDS	90005058	90005117	.	-	0	Parent=comp117214_c0_seq1.mrna1;Target=comp117214_c0_seq1 2 61 +
ChrX	gffcl	locus	90061749	90067654	.	+	.	ID=RLOC_00004793;geneIDs=FBgn0259229.1.path1,comp159232_c1_seq1.path1;transcripts=FBgn0259229.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90061863	90067654	.	+	.	ID=FBgn0259229.1.mrna1;geneID=FBgn0259229.1.path1;Name=FBgn0259229.1;Dir=sensecoverage=100.0;identity=100.0;matches=2109;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004793
ChrX	stalkie_big_nohaplotig	exon	90061863	90062187	100	+	.	Parent=FBgn0259229.1.mrna1;Target=FBgn0259229.1 1 325 +
ChrX	stalkie_big_nohaplotig	exon	90062471	90062807	100	+	.	Parent=FBgn0259229.1.mrna1;Target=FBgn0259229.1 326 662 +
ChrX	stalkie_big_nohaplotig	exon	90065667	90065740	100	+	.	Parent=FBgn0259229.1.mrna1;Target=FBgn0259229.1 663 736 +
ChrX	stalkie_big_nohaplotig	exon	90065855	90066057	100	+	.	Parent=FBgn0259229.1.mrna1;Target=FBgn0259229.1 737 939 +
ChrX	stalkie_big_nohaplotig	exon	90066125	90066237	100	+	.	Parent=FBgn0259229.1.mrna1;Target=FBgn0259229.1 940 1052 +
ChrX	stalkie_big_nohaplotig	exon	90066301	90066517	100	+	.	Parent=FBgn0259229.1.mrna1;Target=FBgn0259229.1 1053 1269 +
ChrX	stalkie_big_nohaplotig	exon	90066570	90066757	100	+	.	Parent=FBgn0259229.1.mrna1;Target=FBgn0259229.1 1270 1457 +
ChrX	stalkie_big_nohaplotig	exon	90066833	90066968	100	+	.	Parent=FBgn0259229.1.mrna1;Target=FBgn0259229.1 1458 1593 +
ChrX	stalkie_big_nohaplotig	exon	90067034	90067369	100	+	.	Parent=FBgn0259229.1.mrna1;Target=FBgn0259229.1 1594 1929 +
ChrX	stalkie_big_nohaplotig	exon	90067475	90067654	100	+	.	Parent=FBgn0259229.1.mrna1;Target=FBgn0259229.1 1930 2109 +
ChrX	stalkie_big_nohaplotig	CDS	90061863	90062187	.	+	0	Parent=FBgn0259229.1.mrna1;Target=FBgn0259229.1 1 325 +
ChrX	stalkie_big_nohaplotig	CDS	90062471	90062807	.	+	2	Parent=FBgn0259229.1.mrna1;Target=FBgn0259229.1 326 662 +
ChrX	stalkie_big_nohaplotig	CDS	90065667	90065740	.	+	1	Parent=FBgn0259229.1.mrna1;Target=FBgn0259229.1 663 736 +
ChrX	stalkie_big_nohaplotig	CDS	90065855	90066057	.	+	2	Parent=FBgn0259229.1.mrna1;Target=FBgn0259229.1 737 939 +
ChrX	stalkie_big_nohaplotig	CDS	90066125	90066237	.	+	0	Parent=FBgn0259229.1.mrna1;Target=FBgn0259229.1 940 1052 +
ChrX	stalkie_big_nohaplotig	CDS	90066301	90066517	.	+	1	Parent=FBgn0259229.1.mrna1;Target=FBgn0259229.1 1053 1269 +
ChrX	stalkie_big_nohaplotig	CDS	90066570	90066757	.	+	0	Parent=FBgn0259229.1.mrna1;Target=FBgn0259229.1 1270 1457 +
ChrX	stalkie_big_nohaplotig	CDS	90066833	90066968	.	+	1	Parent=FBgn0259229.1.mrna1;Target=FBgn0259229.1 1458 1593 +
ChrX	stalkie_big_nohaplotig	CDS	90067034	90067369	.	+	0	Parent=FBgn0259229.1.mrna1;Target=FBgn0259229.1 1594 1929 +
ChrX	stalkie_big_nohaplotig	CDS	90067475	90067654	.	+	0	Parent=FBgn0259229.1.mrna1;Target=FBgn0259229.1 1930 2109 +
ChrX	gffcl	locus	90073679	90080039	.	-	.	ID=RLOC_00004794;geneIDs=FBgn0003346.2.path1;transcripts=FBgn0003346.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90073679	90080039	.	-	.	ID=FBgn0003346.2.mrna1;geneID=FBgn0003346.2.path1;Name=FBgn0003346.2;Dir=sensecoverage=99.9;identity=99.3;matches=4282;mismatches=32;indels=0;unknowns=0;locus=RLOC_00004794
ChrX	stalkie_big_nohaplotig	exon	90073679	90073726	100	-	.	Parent=FBgn0003346.2.mrna1;Target=FBgn0003346.2 4270 4317 +
ChrX	stalkie_big_nohaplotig	exon	90073791	90073847	100	-	.	Parent=FBgn0003346.2.mrna1;Target=FBgn0003346.2 4213 4269 +
ChrX	stalkie_big_nohaplotig	exon	90073908	90074012	100	-	.	Parent=FBgn0003346.2.mrna1;Target=FBgn0003346.2 4108 4212 +
ChrX	stalkie_big_nohaplotig	exon	90074071	90077250	99	-	.	Parent=FBgn0003346.2.mrna1;Target=FBgn0003346.2 928 4107 +
ChrX	stalkie_big_nohaplotig	exon	90077364	90077559	100	-	.	Parent=FBgn0003346.2.mrna1;Target=FBgn0003346.2 732 927 +
ChrX	stalkie_big_nohaplotig	exon	90077629	90078274	100	-	.	Parent=FBgn0003346.2.mrna1;Target=FBgn0003346.2 86 731 +
ChrX	stalkie_big_nohaplotig	exon	90079958	90080039	97	-	.	Parent=FBgn0003346.2.mrna1;Target=FBgn0003346.2 4 85 +
ChrX	stalkie_big_nohaplotig	CDS	90073679	90073726	.	-	0	Parent=FBgn0003346.2.mrna1;Target=FBgn0003346.2 4270 4317 +
ChrX	stalkie_big_nohaplotig	CDS	90073791	90073847	.	-	0	Parent=FBgn0003346.2.mrna1;Target=FBgn0003346.2 4213 4269 +
ChrX	stalkie_big_nohaplotig	CDS	90073908	90074012	.	-	0	Parent=FBgn0003346.2.mrna1;Target=FBgn0003346.2 4108 4212 +
ChrX	stalkie_big_nohaplotig	CDS	90074071	90077250	.	-	0	Parent=FBgn0003346.2.mrna1;Target=FBgn0003346.2 928 4107 +
ChrX	stalkie_big_nohaplotig	CDS	90077364	90077559	.	-	1	Parent=FBgn0003346.2.mrna1;Target=FBgn0003346.2 732 927 +
ChrX	stalkie_big_nohaplotig	CDS	90077629	90078274	.	-	2	Parent=FBgn0003346.2.mrna1;Target=FBgn0003346.2 86 731 +
ChrX	stalkie_big_nohaplotig	CDS	90079958	90080039	.	-	0	Parent=FBgn0003346.2.mrna1;Target=FBgn0003346.2 4 85 +
ChrX	gffcl	locus	90118692	90120165	.	+	.	ID=RLOC_00004796;geneIDs=comp135896_c0_seq1.path1;transcripts=comp135896_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90118692	90120165	.	+	.	ID=comp135896_c0_seq1.mrna1;geneID=comp135896_c0_seq1.path1;Name=comp135896_c0_seq1;Dir=sensecoverage=98.3;identity=99.3;matches=887;mismatches=2;indels=4;unknowns=0;locus=RLOC_00004796
ChrX	stalkie_big_nohaplotig	exon	90118692	90119049	98	+	.	Parent=comp135896_c0_seq1.mrna1;Target=comp135896_c0_seq1 15 376 +
ChrX	stalkie_big_nohaplotig	exon	90119109	90119276	100	+	.	Parent=comp135896_c0_seq1.mrna1;Target=comp135896_c0_seq1 377 544 +
ChrX	stalkie_big_nohaplotig	exon	90119803	90120165	100	+	.	Parent=comp135896_c0_seq1.mrna1;Target=comp135896_c0_seq1 545 907 +
ChrX	stalkie_big_nohaplotig	CDS	90118828	90119049	.	+	0	Parent=comp135896_c0_seq1.mrna1;Target=comp135896_c0_seq1 155 376 +
ChrX	stalkie_big_nohaplotig	CDS	90119109	90119276	.	+	0	Parent=comp135896_c0_seq1.mrna1;Target=comp135896_c0_seq1 377 544 +
ChrX	stalkie_big_nohaplotig	CDS	90119803	90120051	.	+	0	Parent=comp135896_c0_seq1.mrna1;Target=comp135896_c0_seq1 545 793 +
ChrX	gffcl	locus	90152659	90153747	.	-	.	ID=RLOC_00004797;geneIDs=ORF1654.path1;transcripts=ORF1654.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90152659	90153747	.	-	.	ID=ORF1654.mrna1;geneID=ORF1654.path1;Name=ORF1654;Dir=sensecoverage=100.0;identity=100.0;matches=1035;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004797
ChrX	stalkie_big_nohaplotig	exon	90152659	90153158	100	-	.	Parent=ORF1654.mrna1;Target=ORF1654 536 1035 +
ChrX	stalkie_big_nohaplotig	exon	90153213	90153747	100	-	.	Parent=ORF1654.mrna1;Target=ORF1654 1 535 +
ChrX	stalkie_big_nohaplotig	CDS	90152659	90153158	.	-	2	Parent=ORF1654.mrna1;Target=ORF1654 536 1035 +
ChrX	stalkie_big_nohaplotig	CDS	90153213	90153747	.	-	0	Parent=ORF1654.mrna1;Target=ORF1654 1 535 +
ChrX	gffcl	locus	90183696	90184421	.	+	.	ID=RLOC_00004798;geneIDs=comp2481_c1_seq1.path1;transcripts=comp2481_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90183696	90184421	.	+	.	ID=comp2481_c1_seq1.mrna1;geneID=comp2481_c1_seq1.path1;Name=comp2481_c1_seq1;Dir=antisensecoverage=74.6;identity=100.0;matches=423;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004798
ChrX	stalkie_big_nohaplotig	exon	90183696	90184037	100	+	.	Parent=comp2481_c1_seq1.mrna1;Target=comp2481_c1_seq1 226 567 -
ChrX	stalkie_big_nohaplotig	exon	90184341	90184421	100	+	.	Parent=comp2481_c1_seq1.mrna1;Target=comp2481_c1_seq1 145 225 -
ChrX	stalkie_big_nohaplotig	CDS	90183698	90184037	.	+	0	Parent=comp2481_c1_seq1.mrna1;Target=comp2481_c1_seq1 226 565 .
ChrX	stalkie_big_nohaplotig	CDS	90184341	90184420	.	+	2	Parent=comp2481_c1_seq1.mrna1;Target=comp2481_c1_seq1 146 225 .
ChrX	gffcl	locus	90208283	90208828	.	-	.	ID=RLOC_00004799;geneIDs=comp132710_c2_seq1.path1;transcripts=comp132710_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90208283	90208828	.	-	.	ID=comp132710_c2_seq1.mrna1;geneID=comp132710_c2_seq1.path1;Name=comp132710_c2_seq1;Dir=indeterminatecoverage=99.6;identity=98.2;matches=536;mismatches=10;indels=0;unknowns=0;Target=comp132710_c2_seq1 546 1 .;CDS_Target=comp132710_c2_seq1 125 3 .;locus=RLOC_00004799
ChrX	stalkie_big_nohaplotig	exon	90208283	90208828	98	-	.	Parent=comp132710_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	90208704	90208826	.	-	0	Parent=comp132710_c2_seq1.mrna1
ChrX	gffcl	locus	90209328	90209907	.	-	.	ID=RLOC_00004800;geneIDs=comp135819_c0_seq1.path1;transcripts=comp135819_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90209328	90209907	.	-	.	ID=comp135819_c0_seq1.mrna1;geneID=comp135819_c0_seq1.path1;Name=comp135819_c0_seq1;Dir=indeterminatecoverage=89.8;identity=99.8;matches=579;mismatches=1;indels=0;unknowns=0;Target=comp135819_c0_seq1 582 3 .;CDS_Target=comp135819_c0_seq1 460 320 .;locus=RLOC_00004800
ChrX	stalkie_big_nohaplotig	exon	90209328	90209907	99	-	.	Parent=comp135819_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	90209450	90209590	.	-	0	Parent=comp135819_c0_seq1.mrna1
ChrX	gffcl	locus	90213070	90214020	.	+	.	ID=RLOC_00004801;geneIDs=ORF1960.path1;transcripts=ORF1960.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90213070	90214020	.	+	.	ID=ORF1960.mrna1;geneID=ORF1960.path1;Name=ORF1960;Dir=indeterminatecoverage=100.0;identity=99.8;matches=949;mismatches=2;indels=0;unknowns=0;Target=ORF1960 951 1 .;locus=RLOC_00004801
ChrX	stalkie_big_nohaplotig	exon	90213070	90214020	99	+	.	Parent=ORF1960.mrna1
ChrX	stalkie_big_nohaplotig	CDS	90213070	90214020	.	+	0	Parent=ORF1960.mrna1
ChrX	gffcl	locus	90450815	90451452	.	+	.	ID=RLOC_00004803;geneIDs=comp136340_c1_seq1.path1;transcripts=comp136340_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90450815	90451452	.	+	.	ID=comp136340_c1_seq1.mrna1;geneID=comp136340_c1_seq1.path1;Name=comp136340_c1_seq1;Dir=antisensecoverage=99.8;identity=99.8;matches=522;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004803
ChrX	stalkie_big_nohaplotig	exon	90450815	90450876	100	+	.	Parent=comp136340_c1_seq1.mrna1;Target=comp136340_c1_seq1 462 523 -
ChrX	stalkie_big_nohaplotig	exon	90450936	90451184	100	+	.	Parent=comp136340_c1_seq1.mrna1;Target=comp136340_c1_seq1 213 461 -
ChrX	stalkie_big_nohaplotig	exon	90451241	90451452	99	+	.	Parent=comp136340_c1_seq1.mrna1;Target=comp136340_c1_seq1 1 212 -
ChrX	stalkie_big_nohaplotig	CDS	90450817	90450876	.	+	0	Parent=comp136340_c1_seq1.mrna1;Target=comp136340_c1_seq1 462 521 .
ChrX	stalkie_big_nohaplotig	CDS	90450936	90451184	.	+	0	Parent=comp136340_c1_seq1.mrna1;Target=comp136340_c1_seq1 213 461 .
ChrX	stalkie_big_nohaplotig	CDS	90451241	90451291	.	+	0	Parent=comp136340_c1_seq1.mrna1;Target=comp136340_c1_seq1 162 212 .
ChrX	gffcl	locus	90452322	90452750	.	+	.	ID=RLOC_00004804;geneIDs=comp156809_c0_seq1.path1;transcripts=comp156809_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90452322	90452750	.	+	.	ID=comp156809_c0_seq1.mrna1;geneID=comp156809_c0_seq1.path1;Name=comp156809_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.2;matches=404;mismatches=13;indels=12;unknowns=0;Target=comp156809_c0_seq1 417 1 .;CDS_Target=comp156809_c0_seq1 110 3 .;locus=RLOC_00004804
ChrX	stalkie_big_nohaplotig	exon	90452322	90452750	94	+	.	Parent=comp156809_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	90452324	90452431	.	+	0	Parent=comp156809_c0_seq1.mrna1
ChrX	gffcl	locus	90455652	90456520	.	+	.	ID=RLOC_00004805;geneIDs=comp153471_c0_seq1.path1;transcripts=comp153471_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90455652	90456520	.	+	.	ID=comp153471_c0_seq1.mrna1;geneID=comp153471_c0_seq1.path1;Name=comp153471_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=798;mismatches=4;indels=0;unknowns=0;locus=RLOC_00004805
ChrX	stalkie_big_nohaplotig	exon	90455652	90456183	99	+	.	Parent=comp153471_c0_seq1.mrna1;Target=comp153471_c0_seq1 271 802 -
ChrX	stalkie_big_nohaplotig	exon	90456251	90456520	99	+	.	Parent=comp153471_c0_seq1.mrna1;Target=comp153471_c0_seq1 1 270 -
ChrX	stalkie_big_nohaplotig	CDS	90455944	90456183	.	+	0	Parent=comp153471_c0_seq1.mrna1;Target=comp153471_c0_seq1 271 510 .
ChrX	stalkie_big_nohaplotig	CDS	90456251	90456280	.	+	0	Parent=comp153471_c0_seq1.mrna1;Target=comp153471_c0_seq1 241 270 .
ChrX	gffcl	locus	90471198	90478198	.	+	.	ID=RLOC_00004806;geneIDs=comp155740_c0_seq1.path1;transcripts=comp155740_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90471198	90478198	.	+	.	ID=comp155740_c0_seq1.mrna1;geneID=comp155740_c0_seq1.path1;Name=comp155740_c0_seq1;Dir=antisensecoverage=99.9;identity=99.4;matches=2051;mismatches=11;indels=1;unknowns=0;locus=RLOC_00004806
ChrX	stalkie_big_nohaplotig	exon	90471198	90471490	99	+	.	Parent=comp155740_c0_seq1.mrna1;Target=comp155740_c0_seq1 1772 2064 -
ChrX	stalkie_big_nohaplotig	exon	90471554	90471764	99	+	.	Parent=comp155740_c0_seq1.mrna1;Target=comp155740_c0_seq1 1561 1771 -
ChrX	stalkie_big_nohaplotig	exon	90476289	90476704	99	+	.	Parent=comp155740_c0_seq1.mrna1;Target=comp155740_c0_seq1 1145 1560 -
ChrX	stalkie_big_nohaplotig	exon	90477057	90478198	99	+	.	Parent=comp155740_c0_seq1.mrna1;Target=comp155740_c0_seq1 2 1144 -
ChrX	stalkie_big_nohaplotig	CDS	90476395	90476704	.	+	0	Parent=comp155740_c0_seq1.mrna1;Target=comp155740_c0_seq1 1145 1454 .
ChrX	stalkie_big_nohaplotig	CDS	90477057	90477895	.	+	2	Parent=comp155740_c0_seq1.mrna1;Target=comp155740_c0_seq1 306 1144 .
ChrX	gffcl	locus	90481624	90482372	.	+	.	ID=RLOC_00004807;geneIDs=comp130050_c0_seq1.path1;transcripts=comp130050_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90481624	90482372	.	+	.	ID=comp130050_c0_seq1.mrna1;geneID=comp130050_c0_seq1.path1;Name=comp130050_c0_seq1;Dir=antisensecoverage=99.7;identity=99.9;matches=668;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004807
ChrX	stalkie_big_nohaplotig	exon	90481624	90481889	99	+	.	Parent=comp130050_c0_seq1.mrna1;Target=comp130050_c0_seq1 406 671 -
ChrX	stalkie_big_nohaplotig	exon	90481970	90482372	100	+	.	Parent=comp130050_c0_seq1.mrna1;Target=comp130050_c0_seq1 3 405 -
ChrX	stalkie_big_nohaplotig	CDS	90481625	90481889	.	+	0	Parent=comp130050_c0_seq1.mrna1;Target=comp130050_c0_seq1 406 670 .
ChrX	stalkie_big_nohaplotig	CDS	90481970	90482370	.	+	2	Parent=comp130050_c0_seq1.mrna1;Target=comp130050_c0_seq1 5 405 .
ChrX	gffcl	locus	90486499	90488541	.	+	.	ID=RLOC_00004808;geneIDs=ORF1436.path1;transcripts=ORF1436.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90486499	90488541	.	+	.	ID=ORF1436.mrna1;geneID=ORF1436.path1;Name=ORF1436;Dir=sensecoverage=100.0;identity=100.0;matches=1104;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004808
ChrX	stalkie_big_nohaplotig	exon	90486499	90487266	100	+	.	Parent=ORF1436.mrna1;Target=ORF1436 1 768 +
ChrX	stalkie_big_nohaplotig	exon	90488144	90488419	100	+	.	Parent=ORF1436.mrna1;Target=ORF1436 769 1044 +
ChrX	stalkie_big_nohaplotig	exon	90488482	90488541	100	+	.	Parent=ORF1436.mrna1;Target=ORF1436 1045 1104 +
ChrX	stalkie_big_nohaplotig	CDS	90486499	90487266	.	+	0	Parent=ORF1436.mrna1;Target=ORF1436 1 768 +
ChrX	stalkie_big_nohaplotig	CDS	90488144	90488419	.	+	0	Parent=ORF1436.mrna1;Target=ORF1436 769 1044 +
ChrX	stalkie_big_nohaplotig	CDS	90488482	90488541	.	+	0	Parent=ORF1436.mrna1;Target=ORF1436 1045 1104 +
ChrX	gffcl	locus	90493357	90495483	.	+	.	ID=RLOC_00004809;geneIDs=comp153409_c0_seq1.path1;transcripts=comp153409_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90493357	90495483	.	+	.	ID=comp153409_c0_seq1.mrna1;geneID=comp153409_c0_seq1.path1;Name=comp153409_c0_seq1;Dir=antisensecoverage=100.0;identity=98.5;matches=655;mismatches=9;indels=1;unknowns=0;locus=RLOC_00004809
ChrX	stalkie_big_nohaplotig	exon	90493357	90493942	98	+	.	Parent=comp153409_c0_seq1.mrna1;Target=comp153409_c0_seq1 80 664 -
ChrX	stalkie_big_nohaplotig	exon	90495405	90495483	100	+	.	Parent=comp153409_c0_seq1.mrna1;Target=comp153409_c0_seq1 1 79 -
ChrX	stalkie_big_nohaplotig	CDS	90493913	90493942	.	+	0	Parent=comp153409_c0_seq1.mrna1;Target=comp153409_c0_seq1 80 109 .
ChrX	stalkie_big_nohaplotig	CDS	90495405	90495482	.	+	0	Parent=comp153409_c0_seq1.mrna1;Target=comp153409_c0_seq1 2 79 .
ChrX	gffcl	locus	90509013	90509477	.	-	.	ID=RLOC_00004810;geneIDs=FBgn0013347.5.path1;transcripts=FBgn0013347.5.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90509013	90509477	.	-	.	ID=FBgn0013347.5.mrna1;geneID=FBgn0013347.5.path1;Name=FBgn0013347.5;Dir=sensecoverage=100.0;identity=98.8;matches=406;mismatches=5;indels=0;unknowns=0;locus=RLOC_00004810
ChrX	stalkie_big_nohaplotig	exon	90509013	90509285	98	-	.	Parent=FBgn0013347.5.mrna1;Target=FBgn0013347.5 139 411 +
ChrX	stalkie_big_nohaplotig	exon	90509340	90509477	98	-	.	Parent=FBgn0013347.5.mrna1;Target=FBgn0013347.5 1 138 +
ChrX	stalkie_big_nohaplotig	CDS	90509013	90509285	.	-	0	Parent=FBgn0013347.5.mrna1;Target=FBgn0013347.5 139 411 +
ChrX	stalkie_big_nohaplotig	CDS	90509340	90509477	.	-	0	Parent=FBgn0013347.5.mrna1;Target=FBgn0013347.5 1 138 +
ChrX	gffcl	locus	90600936	90701778	.	+	.	ID=RLOC_00004811;geneIDs=FBgn0051646.1.path1;transcripts=FBgn0051646.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90600936	90701778	.	+	.	ID=FBgn0051646.1.mrna1;geneID=FBgn0051646.1.path1;Name=FBgn0051646.1;Dir=sensecoverage=100.0;identity=100.0;matches=1233;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004811
ChrX	stalkie_big_nohaplotig	exon	90600936	90601260	100	+	.	Parent=FBgn0051646.1.mrna1;Target=FBgn0051646.1 1 325 +
ChrX	stalkie_big_nohaplotig	exon	90633266	90633337	100	+	.	Parent=FBgn0051646.1.mrna1;Target=FBgn0051646.1 326 397 +
ChrX	stalkie_big_nohaplotig	exon	90650816	90650913	100	+	.	Parent=FBgn0051646.1.mrna1;Target=FBgn0051646.1 398 495 +
ChrX	stalkie_big_nohaplotig	exon	90654256	90654463	100	+	.	Parent=FBgn0051646.1.mrna1;Target=FBgn0051646.1 496 703 +
ChrX	stalkie_big_nohaplotig	exon	90686941	90687099	100	+	.	Parent=FBgn0051646.1.mrna1;Target=FBgn0051646.1 704 862 +
ChrX	stalkie_big_nohaplotig	exon	90698836	90698964	100	+	.	Parent=FBgn0051646.1.mrna1;Target=FBgn0051646.1 863 991 +
ChrX	stalkie_big_nohaplotig	exon	90701537	90701778	100	+	.	Parent=FBgn0051646.1.mrna1;Target=FBgn0051646.1 992 1233 +
ChrX	stalkie_big_nohaplotig	CDS	90600936	90601260	.	+	0	Parent=FBgn0051646.1.mrna1;Target=FBgn0051646.1 1 325 +
ChrX	stalkie_big_nohaplotig	CDS	90633266	90633337	.	+	2	Parent=FBgn0051646.1.mrna1;Target=FBgn0051646.1 326 397 +
ChrX	stalkie_big_nohaplotig	CDS	90650816	90650913	.	+	2	Parent=FBgn0051646.1.mrna1;Target=FBgn0051646.1 398 495 +
ChrX	stalkie_big_nohaplotig	CDS	90654256	90654463	.	+	0	Parent=FBgn0051646.1.mrna1;Target=FBgn0051646.1 496 703 +
ChrX	stalkie_big_nohaplotig	CDS	90686941	90687099	.	+	2	Parent=FBgn0051646.1.mrna1;Target=FBgn0051646.1 704 862 +
ChrX	stalkie_big_nohaplotig	CDS	90698836	90698964	.	+	2	Parent=FBgn0051646.1.mrna1;Target=FBgn0051646.1 863 991 +
ChrX	stalkie_big_nohaplotig	CDS	90701537	90701778	.	+	2	Parent=FBgn0051646.1.mrna1;Target=FBgn0051646.1 992 1233 +
ChrX	gffcl	locus	90670281	90671853	.	-	.	ID=RLOC_00004812;geneIDs=comp135682_c1_seq1.path1;transcripts=comp135682_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90670281	90671853	.	-	.	ID=comp135682_c1_seq1.mrna1;geneID=comp135682_c1_seq1.path1;Name=comp135682_c1_seq1;Dir=antisensecoverage=100.0;identity=96.0;matches=934;mismatches=34;indels=5;unknowns=0;Target=comp135682_c1_seq1 527 721 .;locus=RLOC_00004812
ChrX	stalkie_big_nohaplotig	exon	90670281	90670393	95	-	.	Parent=comp135682_c1_seq1.mrna1;Target=comp135682_c1_seq1 1 113 -
ChrX	stalkie_big_nohaplotig	exon	90670431	90670576	92	-	.	Parent=comp135682_c1_seq1.mrna1;Target=comp135682_c1_seq1 128 268 -
ChrX	stalkie_big_nohaplotig	exon	90670789	90671423	97	-	.	Parent=comp135682_c1_seq1.mrna1;Target=comp135682_c1_seq1 269 903 -
ChrX	stalkie_big_nohaplotig	exon	90671775	90671853	92	-	.	Parent=comp135682_c1_seq1.mrna1;Target=comp135682_c1_seq1 904 982 -
ChrX	stalkie_big_nohaplotig	CDS	90671047	90671241	.	-	0	Parent=comp135682_c1_seq1.mrna1
ChrX	gffcl	locus	90703471	90704274	.	-	.	ID=RLOC_00004813;geneIDs=comp137136_c0_seq1.path1;transcripts=comp137136_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90703471	90704274	.	-	.	ID=comp137136_c0_seq1.mrna1;geneID=comp137136_c0_seq1.path1;Name=comp137136_c0_seq1;Dir=antisensecoverage=99.8;identity=100.0;matches=612;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004813
ChrX	stalkie_big_nohaplotig	exon	90703471	90703653	100	-	.	Parent=comp137136_c0_seq1.mrna1;Target=comp137136_c0_seq1 2 184 -
ChrX	stalkie_big_nohaplotig	exon	90703722	90703958	100	-	.	Parent=comp137136_c0_seq1.mrna1;Target=comp137136_c0_seq1 185 421 -
ChrX	stalkie_big_nohaplotig	exon	90704024	90704163	100	-	.	Parent=comp137136_c0_seq1.mrna1;Target=comp137136_c0_seq1 422 561 -
ChrX	stalkie_big_nohaplotig	exon	90704223	90704274	100	-	.	Parent=comp137136_c0_seq1.mrna1;Target=comp137136_c0_seq1 562 613 -
ChrX	stalkie_big_nohaplotig	CDS	90703478	90703653	.	-	2	Parent=comp137136_c0_seq1.mrna1;Target=comp137136_c0_seq1 9 184 .
ChrX	stalkie_big_nohaplotig	CDS	90703722	90703758	.	-	0	Parent=comp137136_c0_seq1.mrna1;Target=comp137136_c0_seq1 185 221 .
ChrX	gffcl	locus	90749944	90751725	.	+	.	ID=RLOC_00004814;geneIDs=comp158290_c0_seq1.path1;transcripts=comp158290_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90749944	90751725	.	+	.	ID=comp158290_c0_seq1.mrna1;geneID=comp158290_c0_seq1.path1;Name=comp158290_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1779;mismatches=3;indels=0;unknowns=0;Target=comp158290_c0_seq1 1782 1 .;CDS_Target=comp158290_c0_seq1 802 587 .;locus=RLOC_00004814
ChrX	stalkie_big_nohaplotig	exon	90749944	90751725	99	+	.	Parent=comp158290_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	90750530	90750745	.	+	0	Parent=comp158290_c0_seq1.mrna1
ChrX	gffcl	locus	90771568	90772259	.	-	.	ID=RLOC_00004815;geneIDs=comp156591_c0_seq1.path5;transcripts=comp156591_c0_seq1.mrna5
ChrX	stalkie_big_nohaplotig	mRNA	90771568	90772259	.	-	.	ID=comp156591_c0_seq1.mrna5;geneID=comp156591_c0_seq1.path5;Name=comp156591_c0_seq1;Dir=indeterminatecoverage=89.4;identity=97.9;matches=685;mismatches=4;indels=11;unknowns=0;Target=comp156591_c0_seq1 780 84 .;CDS_Target=comp156591_c0_seq1 105 85 .;locus=RLOC_00004815
ChrX	stalkie_big_nohaplotig	exon	90771568	90772259	97	-	.	Parent=comp156591_c0_seq1.mrna5
ChrX	stalkie_big_nohaplotig	CDS	90772239	90772258	.	-	0	Parent=comp156591_c0_seq1.mrna5
ChrX	gffcl	locus	90779723	90780130	.	-	.	ID=RLOC_00004816;geneIDs=comp149553_c0_seq1.path8;transcripts=comp149553_c0_seq1.mrna8
ChrX	stalkie_big_nohaplotig	mRNA	90779723	90780130	.	-	.	ID=comp149553_c0_seq1.mrna8;geneID=comp149553_c0_seq1.path8;Name=comp149553_c0_seq1;Dir=indeterminatecoverage=90.7;identity=99.5;matches=406;mismatches=2;indels=0;unknowns=0;Target=comp149553_c0_seq1 408 1 .;CDS_Target=comp149553_c0_seq1 384 298 .;locus=RLOC_00004816
ChrX	stalkie_big_nohaplotig	exon	90779723	90780130	99	-	.	Parent=comp149553_c0_seq1.mrna8
ChrX	stalkie_big_nohaplotig	CDS	90779747	90779833	.	-	0	Parent=comp149553_c0_seq1.mrna8
ChrX	gffcl	locus	90780273	90781718	.	+	.	ID=RLOC_00004817;geneIDs=FBgn0039711.3.path4;transcripts=FBgn0039711.3.mrna4
ChrX	stalkie_big_nohaplotig	mRNA	90780273	90781718	.	+	.	ID=FBgn0039711.3.mrna4;geneID=FBgn0039711.3.path4;Name=FBgn0039711.3;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1445;mismatches=1;indels=0;unknowns=0;Target=FBgn0039711.3 1446 1 .;locus=RLOC_00004817
ChrX	stalkie_big_nohaplotig	exon	90780273	90781718	99	+	.	Parent=FBgn0039711.3.mrna4
ChrX	stalkie_big_nohaplotig	CDS	90780273	90781718	.	+	0	Parent=FBgn0039711.3.mrna4
ChrX	gffcl	locus	90808758	90809234	.	+	.	ID=RLOC_00004818;geneIDs=comp144206_c1_seq1.path1;transcripts=comp144206_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90808758	90809234	.	+	.	ID=comp144206_c1_seq1.mrna1;geneID=comp144206_c1_seq1.path1;Name=comp144206_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=477;mismatches=0;indels=1;unknowns=0;Target=comp144206_c1_seq1 478 1 .;CDS_Target=comp144206_c1_seq1 118 2 .;locus=RLOC_00004818
ChrX	stalkie_big_nohaplotig	exon	90808758	90809234	99	+	.	Parent=comp144206_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	90808759	90808875	.	+	0	Parent=comp144206_c1_seq1.mrna1
ChrX	gffcl	locus	90835925	90848406	.	+	.	ID=RLOC_00004819;geneIDs=FBgn0000547.1.path1;transcripts=FBgn0000547.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90835925	90848406	.	+	.	ID=FBgn0000547.1.mrna1;geneID=FBgn0000547.1.path1;Name=FBgn0000547.1;Dir=sensecoverage=98.3;identity=100.0;matches=3160;mismatches=0;indels=1;unknowns=0;locus=RLOC_00004819
ChrX	stalkie_big_nohaplotig	exon	90835925	90836117	100	+	.	Parent=FBgn0000547.1.mrna1;Target=FBgn0000547.1 56 248 +
ChrX	stalkie_big_nohaplotig	exon	90842951	90843211	100	+	.	Parent=FBgn0000547.1.mrna1;Target=FBgn0000547.1 249 509 +
ChrX	stalkie_big_nohaplotig	exon	90845065	90845261	100	+	.	Parent=FBgn0000547.1.mrna1;Target=FBgn0000547.1 510 706 +
ChrX	stalkie_big_nohaplotig	exon	90845658	90847838	100	+	.	Parent=FBgn0000547.1.mrna1;Target=FBgn0000547.1 707 2887 +
ChrX	stalkie_big_nohaplotig	exon	90848079	90848406	99	+	.	Parent=FBgn0000547.1.mrna1;Target=FBgn0000547.1 2888 3216 +
ChrX	stalkie_big_nohaplotig	CDS	90835927	90836117	.	+	0	Parent=FBgn0000547.1.mrna1;Target=FBgn0000547.1 58 248 +
ChrX	stalkie_big_nohaplotig	CDS	90842951	90843211	.	+	1	Parent=FBgn0000547.1.mrna1;Target=FBgn0000547.1 249 509 +
ChrX	stalkie_big_nohaplotig	CDS	90845065	90845261	.	+	1	Parent=FBgn0000547.1.mrna1;Target=FBgn0000547.1 510 706 +
ChrX	stalkie_big_nohaplotig	CDS	90845658	90847838	.	+	2	Parent=FBgn0000547.1.mrna1;Target=FBgn0000547.1 707 2887 +
ChrX	stalkie_big_nohaplotig	CDS	90848079	90848406	.	+	2	Parent=FBgn0000547.1.mrna1;Target=FBgn0000547.1 2888 3216 +
ChrX	gffcl	locus	90891915	90893523	.	-	.	ID=RLOC_00004820;geneIDs=comp155014_c0_seq1.path1;transcripts=comp155014_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90891915	90893523	.	-	.	ID=comp155014_c0_seq1.mrna1;geneID=comp155014_c0_seq1.path1;Name=comp155014_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1609;mismatches=0;indels=0;unknowns=0;Target=comp155014_c0_seq1 1609 1 .;CDS_Target=comp155014_c0_seq1 1277 1131 .;locus=RLOC_00004820
ChrX	stalkie_big_nohaplotig	exon	90891915	90893523	100	-	.	Parent=comp155014_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	90892247	90892393	.	-	0	Parent=comp155014_c0_seq1.mrna1
ChrX	gffcl	locus	90906349	91104238	.	+	.	ID=RLOC_00004821;geneIDs=comp142768_c0_seq1.path1;transcripts=comp142768_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90906349	91104238	.	+	.	ID=comp142768_c0_seq1.mrna1;geneID=comp142768_c0_seq1.path1;Name=comp142768_c0_seq1;Dir=indeterminatecoverage=26.5;identity=85.8;matches=223;mismatches=36;indels=1;unknowns=0;Target=comp142768_c0_seq1 174 7 .;locus=RLOC_00004821
ChrX	stalkie_big_nohaplotig	exon	90906349	90906558	82	+	.	Parent=comp142768_c0_seq1.mrna1;Target=comp142768_c0_seq1 215 5 .
ChrX	stalkie_big_nohaplotig	exon	91074609	91074615	100	+	.	Parent=comp142768_c0_seq1.mrna1;Target=comp142768_c0_seq1 222 216 .
ChrX	stalkie_big_nohaplotig	exon	91075195	91075204	100	+	.	Parent=comp142768_c0_seq1.mrna1;Target=comp142768_c0_seq1 232 223 .
ChrX	stalkie_big_nohaplotig	exon	91081558	91081560	100	+	.	Parent=comp142768_c0_seq1.mrna1;Target=comp142768_c0_seq1 235 233 .
ChrX	stalkie_big_nohaplotig	exon	91096032	91096036	100	+	.	Parent=comp142768_c0_seq1.mrna1;Target=comp142768_c0_seq1 240 236 .
ChrX	stalkie_big_nohaplotig	exon	91096108	91096115	100	+	.	Parent=comp142768_c0_seq1.mrna1;Target=comp142768_c0_seq1 248 241 .
ChrX	stalkie_big_nohaplotig	exon	91100709	91100715	100	+	.	Parent=comp142768_c0_seq1.mrna1;Target=comp142768_c0_seq1 255 249 .
ChrX	stalkie_big_nohaplotig	exon	91104230	91104238	100	+	.	Parent=comp142768_c0_seq1.mrna1;Target=comp142768_c0_seq1 281 273 .
ChrX	stalkie_big_nohaplotig	CDS	90906351	90906517	.	+	0	Parent=comp142768_c0_seq1.mrna1
ChrX	gffcl	locus	90922787	90923808	.	-	.	ID=RLOC_00004822;geneIDs=comp168161_c0_seq1.path1;transcripts=comp168161_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90922787	90923808	.	-	.	ID=comp168161_c0_seq1.mrna1;geneID=comp168161_c0_seq1.path1;Name=comp168161_c0_seq1;Dir=sensecoverage=97.5;identity=100.0;matches=620;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004822
ChrX	stalkie_big_nohaplotig	exon	90922787	90922970	100	-	.	Parent=comp168161_c0_seq1.mrna1;Target=comp168161_c0_seq1 437 620 +
ChrX	stalkie_big_nohaplotig	exon	90923313	90923477	100	-	.	Parent=comp168161_c0_seq1.mrna1;Target=comp168161_c0_seq1 272 436 +
ChrX	stalkie_big_nohaplotig	exon	90923538	90923808	100	-	.	Parent=comp168161_c0_seq1.mrna1;Target=comp168161_c0_seq1 1 271 +
ChrX	stalkie_big_nohaplotig	CDS	90922949	90922970	.	-	1	Parent=comp168161_c0_seq1.mrna1;Target=comp168161_c0_seq1 437 458 +
ChrX	stalkie_big_nohaplotig	CDS	90923313	90923477	.	-	1	Parent=comp168161_c0_seq1.mrna1;Target=comp168161_c0_seq1 272 436 +
ChrX	stalkie_big_nohaplotig	CDS	90923538	90923626	.	-	0	Parent=comp168161_c0_seq1.mrna1;Target=comp168161_c0_seq1 183 271 +
ChrX	gffcl	locus	90961868	90962428	.	+	.	ID=RLOC_00004823;geneIDs=comp153613_c0_seq1.path1;transcripts=comp153613_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90961868	90962428	.	+	.	ID=comp153613_c0_seq1.mrna1;geneID=comp153613_c0_seq1.path1;Name=comp153613_c0_seq1;Dir=indeterminatecoverage=91.2;identity=99.1;matches=556;mismatches=5;indels=0;unknowns=0;Target=comp153613_c0_seq1 561 1 .;CDS_Target=comp153613_c0_seq1 550 383 .;locus=RLOC_00004823
ChrX	stalkie_big_nohaplotig	exon	90961868	90962428	99	+	.	Parent=comp153613_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	90962250	90962417	.	+	0	Parent=comp153613_c0_seq1.mrna1
ChrX	gffcl	locus	90979109	90979774	.	-	.	ID=RLOC_00004824;geneIDs=comp129284_c1_seq1.path1;transcripts=comp129284_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90979109	90979774	.	-	.	ID=comp129284_c1_seq1.mrna1;geneID=comp129284_c1_seq1.path1;Name=comp129284_c1_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=611;mismatches=0;indels=0;unknowns=0;Target=comp129284_c1_seq1 530 610 +;locus=RLOC_00004824
ChrX	stalkie_big_nohaplotig	exon	90979109	90979253	100	-	.	Parent=comp129284_c1_seq1.mrna1;Target=comp129284_c1_seq1 467 611 +
ChrX	stalkie_big_nohaplotig	exon	90979309	90979774	100	-	.	Parent=comp129284_c1_seq1.mrna1;Target=comp129284_c1_seq1 1 466 +
ChrX	stalkie_big_nohaplotig	CDS	90979110	90979190	.	-	0	Parent=comp129284_c1_seq1.mrna1
ChrX	gffcl	locus	90988292	90990195	.	-	.	ID=RLOC_00004825;geneIDs=comp147625_c0_seq1.path1;transcripts=comp147625_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90988292	90990195	.	-	.	ID=comp147625_c0_seq1.mrna1;geneID=comp147625_c0_seq1.path1;Name=comp147625_c0_seq1;Dir=sensecoverage=99.9;identity=100.0;matches=682;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004825
ChrX	stalkie_big_nohaplotig	exon	90988292	90988490	100	-	.	Parent=comp147625_c0_seq1.mrna1;Target=comp147625_c0_seq1 484 682 +
ChrX	stalkie_big_nohaplotig	exon	90988557	90988750	100	-	.	Parent=comp147625_c0_seq1.mrna1;Target=comp147625_c0_seq1 290 483 +
ChrX	stalkie_big_nohaplotig	exon	90989572	90989667	100	-	.	Parent=comp147625_c0_seq1.mrna1;Target=comp147625_c0_seq1 194 289 +
ChrX	stalkie_big_nohaplotig	exon	90989727	90989895	100	-	.	Parent=comp147625_c0_seq1.mrna1;Target=comp147625_c0_seq1 25 193 +
ChrX	stalkie_big_nohaplotig	exon	90990172	90990195	100	-	.	Parent=comp147625_c0_seq1.mrna1;Target=comp147625_c0_seq1 1 24 +
ChrX	stalkie_big_nohaplotig	CDS	90988446	90988490	.	-	0	Parent=comp147625_c0_seq1.mrna1;Target=comp147625_c0_seq1 484 528 +
ChrX	stalkie_big_nohaplotig	CDS	90988557	90988750	.	-	2	Parent=comp147625_c0_seq1.mrna1;Target=comp147625_c0_seq1 290 483 +
ChrX	stalkie_big_nohaplotig	CDS	90989572	90989667	.	-	2	Parent=comp147625_c0_seq1.mrna1;Target=comp147625_c0_seq1 194 289 +
ChrX	stalkie_big_nohaplotig	CDS	90989727	90989781	.	-	0	Parent=comp147625_c0_seq1.mrna1;Target=comp147625_c0_seq1 139 193 +
ChrX	gffcl	locus	90994919	90996156	.	+	.	ID=RLOC_00004826;geneIDs=comp64812_c0_seq1.path1;transcripts=comp64812_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	90994919	90996156	.	+	.	ID=comp64812_c0_seq1.mrna1;geneID=comp64812_c0_seq1.path1;Name=comp64812_c0_seq1;Dir=antisensecoverage=98.6;identity=100.0;matches=960;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004826
ChrX	stalkie_big_nohaplotig	exon	90994919	90995140	100	+	.	Parent=comp64812_c0_seq1.mrna1;Target=comp64812_c0_seq1 753 974 -
ChrX	stalkie_big_nohaplotig	exon	90995212	90995313	100	+	.	Parent=comp64812_c0_seq1.mrna1;Target=comp64812_c0_seq1 651 752 -
ChrX	stalkie_big_nohaplotig	exon	90995455	90995609	100	+	.	Parent=comp64812_c0_seq1.mrna1;Target=comp64812_c0_seq1 496 650 -
ChrX	stalkie_big_nohaplotig	exon	90995676	90996156	100	+	.	Parent=comp64812_c0_seq1.mrna1;Target=comp64812_c0_seq1 15 495 -
ChrX	stalkie_big_nohaplotig	CDS	90995083	90995140	.	+	0	Parent=comp64812_c0_seq1.mrna1;Target=comp64812_c0_seq1 753 810 .
ChrX	stalkie_big_nohaplotig	CDS	90995212	90995313	.	+	2	Parent=comp64812_c0_seq1.mrna1;Target=comp64812_c0_seq1 651 752 .
ChrX	stalkie_big_nohaplotig	CDS	90995455	90995609	.	+	2	Parent=comp64812_c0_seq1.mrna1;Target=comp64812_c0_seq1 496 650 .
ChrX	stalkie_big_nohaplotig	CDS	90995676	90995816	.	+	0	Parent=comp64812_c0_seq1.mrna1;Target=comp64812_c0_seq1 355 495 .
ChrX	gffcl	locus	91070883	91073337	.	-	.	ID=RLOC_00004827;geneIDs=comp162603_c0_seq1.path2;transcripts=comp162603_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	91070883	91073337	.	-	.	ID=comp162603_c0_seq1.mrna2;geneID=comp162603_c0_seq1.path2;Name=comp162603_c0_seq1;Dir=sensecoverage=100.0;identity=98.5;matches=954;mismatches=11;indels=4;unknowns=0;locus=RLOC_00004827
ChrX	stalkie_big_nohaplotig	exon	91070883	91071126	95	-	.	Parent=comp162603_c0_seq1.mrna2;Target=comp162603_c0_seq1 724 967 +
ChrX	stalkie_big_nohaplotig	exon	91071219	91071355	98	-	.	Parent=comp162603_c0_seq1.mrna2;Target=comp162603_c0_seq1 587 723 +
ChrX	stalkie_big_nohaplotig	exon	91072430	91072612	99	-	.	Parent=comp162603_c0_seq1.mrna2;Target=comp162603_c0_seq1 404 586 +
ChrX	stalkie_big_nohaplotig	exon	91072735	91072806	100	-	.	Parent=comp162603_c0_seq1.mrna2;Target=comp162603_c0_seq1 332 403 +
ChrX	stalkie_big_nohaplotig	exon	91072941	91073006	100	-	.	Parent=comp162603_c0_seq1.mrna2;Target=comp162603_c0_seq1 266 331 +
ChrX	stalkie_big_nohaplotig	exon	91073073	91073337	99	-	.	Parent=comp162603_c0_seq1.mrna2;Target=comp162603_c0_seq1 1 265 +
ChrX	stalkie_big_nohaplotig	CDS	91071067	91071126	.	-	0	Parent=comp162603_c0_seq1.mrna2;Target=comp162603_c0_seq1 724 783 +
ChrX	stalkie_big_nohaplotig	CDS	91071219	91071355	.	-	2	Parent=comp162603_c0_seq1.mrna2;Target=comp162603_c0_seq1 587 723 +
ChrX	stalkie_big_nohaplotig	CDS	91072430	91072612	.	-	2	Parent=comp162603_c0_seq1.mrna2;Target=comp162603_c0_seq1 404 586 +
ChrX	stalkie_big_nohaplotig	CDS	91072735	91072806	.	-	2	Parent=comp162603_c0_seq1.mrna2;Target=comp162603_c0_seq1 332 403 +
ChrX	stalkie_big_nohaplotig	CDS	91072941	91073006	.	-	2	Parent=comp162603_c0_seq1.mrna2;Target=comp162603_c0_seq1 266 331 +
ChrX	stalkie_big_nohaplotig	CDS	91073073	91073139	.	-	0	Parent=comp162603_c0_seq1.mrna2;Target=comp162603_c0_seq1 199 265 +
ChrX	gffcl	locus	91091418	91096335	.	-	.	ID=RLOC_00004828;geneIDs=FBgn0028470.1.path1;transcripts=FBgn0028470.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91091418	91096335	.	-	.	ID=FBgn0028470.1.mrna1;geneID=FBgn0028470.1.path1;Name=FBgn0028470.1;Dir=sensecoverage=100.0;identity=99.5;matches=3706;mismatches=17;indels=0;unknowns=0;locus=RLOC_00004828
ChrX	stalkie_big_nohaplotig	exon	91091418	91091696	99	-	.	Parent=FBgn0028470.1.mrna1;Target=FBgn0028470.1 3445 3723 +
ChrX	stalkie_big_nohaplotig	exon	91091780	91092019	100	-	.	Parent=FBgn0028470.1.mrna1;Target=FBgn0028470.1 3205 3444 +
ChrX	stalkie_big_nohaplotig	exon	91092077	91092855	100	-	.	Parent=FBgn0028470.1.mrna1;Target=FBgn0028470.1 2426 3204 +
ChrX	stalkie_big_nohaplotig	exon	91093612	91095955	99	-	.	Parent=FBgn0028470.1.mrna1;Target=FBgn0028470.1 82 2425 +
ChrX	stalkie_big_nohaplotig	exon	91096255	91096335	100	-	.	Parent=FBgn0028470.1.mrna1;Target=FBgn0028470.1 1 81 +
ChrX	stalkie_big_nohaplotig	CDS	91091418	91091696	.	-	0	Parent=FBgn0028470.1.mrna1;Target=FBgn0028470.1 3445 3723 +
ChrX	stalkie_big_nohaplotig	CDS	91091780	91092019	.	-	0	Parent=FBgn0028470.1.mrna1;Target=FBgn0028470.1 3205 3444 +
ChrX	stalkie_big_nohaplotig	CDS	91092077	91092855	.	-	2	Parent=FBgn0028470.1.mrna1;Target=FBgn0028470.1 2426 3204 +
ChrX	stalkie_big_nohaplotig	CDS	91093612	91095955	.	-	0	Parent=FBgn0028470.1.mrna1;Target=FBgn0028470.1 82 2425 +
ChrX	stalkie_big_nohaplotig	CDS	91096255	91096335	.	-	0	Parent=FBgn0028470.1.mrna1;Target=FBgn0028470.1 1 81 +
ChrX	gffcl	locus	91154007	91156428	.	+	.	ID=RLOC_00004829;geneIDs=comp162603_c0_seq1.path1;transcripts=comp162603_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91154007	91156428	.	+	.	ID=comp162603_c0_seq1.mrna1;geneID=comp162603_c0_seq1.path1;Name=comp162603_c0_seq1;Dir=sensecoverage=100.0;identity=99.0;matches=957;mismatches=10;indels=0;unknowns=0;locus=RLOC_00004829
ChrX	stalkie_big_nohaplotig	exon	91154007	91154271	98	+	.	Parent=comp162603_c0_seq1.mrna1;Target=comp162603_c0_seq1 1 265 +
ChrX	stalkie_big_nohaplotig	exon	91154338	91154403	100	+	.	Parent=comp162603_c0_seq1.mrna1;Target=comp162603_c0_seq1 266 331 +
ChrX	stalkie_big_nohaplotig	exon	91154538	91154609	98	+	.	Parent=comp162603_c0_seq1.mrna1;Target=comp162603_c0_seq1 332 403 +
ChrX	stalkie_big_nohaplotig	exon	91154732	91154914	99	+	.	Parent=comp162603_c0_seq1.mrna1;Target=comp162603_c0_seq1 404 586 +
ChrX	stalkie_big_nohaplotig	exon	91155956	91156092	98	+	.	Parent=comp162603_c0_seq1.mrna1;Target=comp162603_c0_seq1 587 723 +
ChrX	stalkie_big_nohaplotig	exon	91156185	91156428	99	+	.	Parent=comp162603_c0_seq1.mrna1;Target=comp162603_c0_seq1 724 967 +
ChrX	stalkie_big_nohaplotig	CDS	91154205	91154271	.	+	0	Parent=comp162603_c0_seq1.mrna1;Target=comp162603_c0_seq1 199 265 +
ChrX	stalkie_big_nohaplotig	CDS	91154338	91154403	.	+	2	Parent=comp162603_c0_seq1.mrna1;Target=comp162603_c0_seq1 266 331 +
ChrX	stalkie_big_nohaplotig	CDS	91154538	91154609	.	+	2	Parent=comp162603_c0_seq1.mrna1;Target=comp162603_c0_seq1 332 403 +
ChrX	stalkie_big_nohaplotig	CDS	91154732	91154914	.	+	2	Parent=comp162603_c0_seq1.mrna1;Target=comp162603_c0_seq1 404 586 +
ChrX	stalkie_big_nohaplotig	CDS	91155956	91156092	.	+	2	Parent=comp162603_c0_seq1.mrna1;Target=comp162603_c0_seq1 587 723 +
ChrX	stalkie_big_nohaplotig	CDS	91156185	91156244	.	+	0	Parent=comp162603_c0_seq1.mrna1;Target=comp162603_c0_seq1 724 783 +
ChrX	gffcl	locus	91173469	91183882	.	+	.	ID=RLOC_00004830;geneIDs=ORF353.path1;transcripts=ORF353.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91173469	91183882	.	+	.	ID=ORF353.mrna1;geneID=ORF353.path1;Name=ORF353;Dir=sensecoverage=100.0;identity=97.9;matches=1926;mismatches=42;indels=0;unknowns=0;locus=RLOC_00004830
ChrX	stalkie_big_nohaplotig	exon	91173469	91173546	98	+	.	Parent=ORF353.mrna1;Target=ORF353 1 78 +
ChrX	stalkie_big_nohaplotig	exon	91181924	91183526	97	+	.	Parent=ORF353.mrna1;Target=ORF353 79 1681 +
ChrX	stalkie_big_nohaplotig	exon	91183596	91183882	97	+	.	Parent=ORF353.mrna1;Target=ORF353 1682 1968 +
ChrX	stalkie_big_nohaplotig	CDS	91173469	91173546	.	+	0	Parent=ORF353.mrna1;Target=ORF353 1 78 +
ChrX	stalkie_big_nohaplotig	CDS	91181924	91183526	.	+	0	Parent=ORF353.mrna1;Target=ORF353 79 1681 +
ChrX	stalkie_big_nohaplotig	CDS	91183596	91183882	.	+	2	Parent=ORF353.mrna1;Target=ORF353 1682 1968 +
ChrX	gffcl	locus	91225367	91231307	.	-	.	ID=RLOC_00004831;geneIDs=FBgn0031054.3.path1;transcripts=FBgn0031054.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91225367	91231307	.	-	.	ID=FBgn0031054.3.mrna1;geneID=FBgn0031054.3.path1;Name=FBgn0031054.3;Dir=sensecoverage=100.0;identity=100.0;matches=615;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004831
ChrX	stalkie_big_nohaplotig	exon	91225367	91225465	100	-	.	Parent=FBgn0031054.3.mrna1;Target=FBgn0031054.3 517 615 +
ChrX	stalkie_big_nohaplotig	exon	91230739	91230997	100	-	.	Parent=FBgn0031054.3.mrna1;Target=FBgn0031054.3 258 516 +
ChrX	stalkie_big_nohaplotig	exon	91231051	91231307	100	-	.	Parent=FBgn0031054.3.mrna1;Target=FBgn0031054.3 1 257 +
ChrX	stalkie_big_nohaplotig	CDS	91225367	91225465	.	-	0	Parent=FBgn0031054.3.mrna1;Target=FBgn0031054.3 517 615 +
ChrX	stalkie_big_nohaplotig	CDS	91230739	91230997	.	-	1	Parent=FBgn0031054.3.mrna1;Target=FBgn0031054.3 258 516 +
ChrX	stalkie_big_nohaplotig	CDS	91231051	91231307	.	-	0	Parent=FBgn0031054.3.mrna1;Target=FBgn0031054.3 1 257 +
ChrX	gffcl	locus	91234393	91234866	.	+	.	ID=RLOC_00004832;geneIDs=FBgn0016120.1.path1;transcripts=FBgn0016120.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91234393	91234866	.	+	.	ID=FBgn0016120.1.mrna1;geneID=FBgn0016120.1.path1;Name=FBgn0016120.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=474;mismatches=0;indels=0;unknowns=0;Target=FBgn0016120.1 474 1 .;locus=RLOC_00004832
ChrX	stalkie_big_nohaplotig	exon	91234393	91234866	100	+	.	Parent=FBgn0016120.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	91234393	91234866	.	+	0	Parent=FBgn0016120.1.mrna1
ChrX	gffcl	locus	91246385	91249753	.	-	.	ID=RLOC_00004833;geneIDs=FBgn0028979.1.path1;transcripts=FBgn0028979.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91246385	91249753	.	-	.	ID=FBgn0028979.1.mrna1;geneID=FBgn0028979.1.path1;Name=FBgn0028979.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=3360;mismatches=9;indels=0;unknowns=0;Target=FBgn0028979.1 3369 1 .;locus=RLOC_00004833
ChrX	stalkie_big_nohaplotig	exon	91246385	91249753	99	-	.	Parent=FBgn0028979.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	91246385	91249753	.	-	0	Parent=FBgn0028979.1.mrna1
ChrX	gffcl	locus	91249765	91256100	.	-	.	ID=RLOC_00004834;geneIDs=Dv_FBgn0198710.path1,comp150705_c1_seq1.path1;transcripts=comp150705_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91249765	91256100	.	-	.	ID=comp150705_c1_seq1.mrna1;geneID=comp150705_c1_seq1.path1;Name=comp150705_c1_seq1;Dir=antisensecoverage=99.2;identity=99.6;matches=2064;mismatches=6;indels=3;unknowns=0;locus=RLOC_00004834
ChrX	stalkie_big_nohaplotig	exon	91249765	91249928	98	-	.	Parent=comp150705_c1_seq1.mrna1;Target=comp150705_c1_seq1 17 180 -
ChrX	stalkie_big_nohaplotig	exon	91254194	91256100	99	-	.	Parent=comp150705_c1_seq1.mrna1;Target=comp150705_c1_seq1 181 2088 -
ChrX	stalkie_big_nohaplotig	CDS	91249766	91249928	.	-	1	Parent=comp150705_c1_seq1.mrna1;Target=comp150705_c1_seq1 18 180 .
ChrX	stalkie_big_nohaplotig	CDS	91254194	91254249	.	-	0	Parent=comp150705_c1_seq1.mrna1;Target=comp150705_c1_seq1 181 236 .
ChrX	gffcl	locus	91370618	91371790	.	-	.	ID=RLOC_00004835;geneIDs=ORF2754.path1;transcripts=ORF2754.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91370618	91371790	.	-	.	ID=ORF2754.mrna1;geneID=ORF2754.path1;Name=ORF2754;Dir=sensecoverage=100.0;identity=99.8;matches=808;mismatches=2;indels=0;unknowns=0;locus=RLOC_00004835
ChrX	stalkie_big_nohaplotig	exon	91370618	91371336	99	-	.	Parent=ORF2754.mrna1;Target=ORF2754 92 810 +
ChrX	stalkie_big_nohaplotig	exon	91371700	91371790	100	-	.	Parent=ORF2754.mrna1;Target=ORF2754 1 91 +
ChrX	stalkie_big_nohaplotig	CDS	91370618	91371336	.	-	2	Parent=ORF2754.mrna1;Target=ORF2754 92 810 +
ChrX	stalkie_big_nohaplotig	CDS	91371700	91371790	.	-	0	Parent=ORF2754.mrna1;Target=ORF2754 1 91 +
ChrX	gffcl	locus	91384091	91385205	.	+	.	ID=RLOC_00004836;geneIDs=ORF1581.path1;transcripts=ORF1581.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91384091	91385205	.	+	.	ID=ORF1581.mrna1;geneID=ORF1581.path1;Name=ORF1581;Dir=sensecoverage=100.0;identity=100.0;matches=1056;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004836
ChrX	stalkie_big_nohaplotig	exon	91384091	91384277	100	+	.	Parent=ORF1581.mrna1;Target=ORF1581 1 187 +
ChrX	stalkie_big_nohaplotig	exon	91384337	91385205	100	+	.	Parent=ORF1581.mrna1;Target=ORF1581 188 1056 +
ChrX	stalkie_big_nohaplotig	CDS	91384091	91384277	.	+	0	Parent=ORF1581.mrna1;Target=ORF1581 1 187 +
ChrX	stalkie_big_nohaplotig	CDS	91384337	91385205	.	+	2	Parent=ORF1581.mrna1;Target=ORF1581 188 1056 +
ChrX	gffcl	locus	91392325	91393506	.	-	.	ID=RLOC_00004837;geneIDs=comp150014_c0_seq1.path1;transcripts=comp150014_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91392325	91393506	.	-	.	ID=comp150014_c0_seq1.mrna1;geneID=comp150014_c0_seq1.path1;Name=comp150014_c0_seq1;Dir=antisensecoverage=100.0;identity=97.9;matches=821;mismatches=15;indels=3;unknowns=0;Target=comp150014_c0_seq1 711 839 .;locus=RLOC_00004837
ChrX	stalkie_big_nohaplotig	exon	91392325	91392838	97	-	.	Parent=comp150014_c0_seq1.mrna1;Target=comp150014_c0_seq1 1 514 -
ChrX	stalkie_big_nohaplotig	exon	91393185	91393506	98	-	.	Parent=comp150014_c0_seq1.mrna1;Target=comp150014_c0_seq1 515 839 -
ChrX	stalkie_big_nohaplotig	CDS	91393381	91393506	.	-	0	Parent=comp150014_c0_seq1.mrna1
ChrX	gffcl	locus	91528100	91528887	.	+	.	ID=RLOC_00004839;geneIDs=comp145381_c0_seq1.path1;transcripts=comp145381_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91528100	91528887	.	+	.	ID=comp145381_c0_seq1.mrna1;geneID=comp145381_c0_seq1.path1;Name=comp145381_c0_seq1;Dir=sensecoverage=99.6;identity=99.7;matches=735;mismatches=2;indels=0;unknowns=0;locus=RLOC_00004839
ChrX	stalkie_big_nohaplotig	exon	91528100	91528580	100	+	.	Parent=comp145381_c0_seq1.mrna1;Target=comp145381_c0_seq1 2 482 +
ChrX	stalkie_big_nohaplotig	exon	91528632	91528887	99	+	.	Parent=comp145381_c0_seq1.mrna1;Target=comp145381_c0_seq1 483 738 +
ChrX	stalkie_big_nohaplotig	CDS	91528252	91528580	.	+	0	Parent=comp145381_c0_seq1.mrna1;Target=comp145381_c0_seq1 154 482 +
ChrX	stalkie_big_nohaplotig	CDS	91528632	91528638	.	+	1	Parent=comp145381_c0_seq1.mrna1;Target=comp145381_c0_seq1 483 489 +
ChrX	gffcl	locus	91624196	91624844	.	+	.	ID=RLOC_00004840;geneIDs=comp135523_c0_seq1.path1;transcripts=comp135523_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91624196	91624844	.	+	.	ID=comp135523_c0_seq1.mrna1;geneID=comp135523_c0_seq1.path1;Name=comp135523_c0_seq1;Dir=indeterminatecoverage=99.4;identity=100.0;matches=649;mismatches=0;indels=0;unknowns=0;Target=comp135523_c0_seq1 653 5 .;CDS_Target=comp135523_c0_seq1 449 78 .;locus=RLOC_00004840
ChrX	stalkie_big_nohaplotig	exon	91624196	91624844	100	+	.	Parent=comp135523_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	91624269	91624640	.	+	0	Parent=comp135523_c0_seq1.mrna1
ChrX	gffcl	locus	91630438	91631178	.	+	.	ID=RLOC_00004841;geneIDs=FBgn0031054.2.path1;transcripts=FBgn0031054.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91630438	91631178	.	+	.	ID=FBgn0031054.2.mrna1;geneID=FBgn0031054.2.path1;Name=FBgn0031054.2;Dir=sensecoverage=100.0;identity=99.8;matches=593;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004841
ChrX	stalkie_big_nohaplotig	exon	91630438	91630673	99	+	.	Parent=FBgn0031054.2.mrna1;Target=FBgn0031054.2 1 236 +
ChrX	stalkie_big_nohaplotig	exon	91630741	91630999	100	+	.	Parent=FBgn0031054.2.mrna1;Target=FBgn0031054.2 237 495 +
ChrX	stalkie_big_nohaplotig	exon	91631080	91631178	100	+	.	Parent=FBgn0031054.2.mrna1;Target=FBgn0031054.2 496 594 +
ChrX	stalkie_big_nohaplotig	CDS	91630438	91630673	.	+	0	Parent=FBgn0031054.2.mrna1;Target=FBgn0031054.2 1 236 +
ChrX	stalkie_big_nohaplotig	CDS	91630741	91630999	.	+	1	Parent=FBgn0031054.2.mrna1;Target=FBgn0031054.2 237 495 +
ChrX	stalkie_big_nohaplotig	CDS	91631080	91631178	.	+	0	Parent=FBgn0031054.2.mrna1;Target=FBgn0031054.2 496 594 +
ChrX	gffcl	locus	91702615	91704051	.	-	.	ID=RLOC_00004842;geneIDs=comp153149_c3_seq1.path1;transcripts=comp153149_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91702615	91704051	.	-	.	ID=comp153149_c3_seq1.mrna1;geneID=comp153149_c3_seq1.path1;Name=comp153149_c3_seq1;Dir=sensecoverage=96.7;identity=99.6;matches=741;mismatches=3;indels=0;unknowns=0;Target=comp153149_c3_seq1 129 491 +;locus=RLOC_00004842
ChrX	stalkie_big_nohaplotig	exon	91702615	91702735	99	-	.	Parent=comp153149_c3_seq1.mrna1;Target=comp153149_c3_seq1 647 767 +
ChrX	stalkie_big_nohaplotig	exon	91703029	91703175	100	-	.	Parent=comp153149_c3_seq1.mrna1;Target=comp153149_c3_seq1 500 646 +
ChrX	stalkie_big_nohaplotig	exon	91703576	91704051	99	-	.	Parent=comp153149_c3_seq1.mrna1;Target=comp153149_c3_seq1 24 499 +
ChrX	stalkie_big_nohaplotig	CDS	91703584	91703946	.	-	0	Parent=comp153149_c3_seq1.mrna1
ChrX	gffcl	locus	91714864	91716224	.	-	.	ID=RLOC_00004843;geneIDs=FBgn0032030.3.path1;transcripts=FBgn0032030.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91714864	91716224	.	-	.	ID=FBgn0032030.3.mrna1;geneID=FBgn0032030.3.path1;Name=FBgn0032030.3;Dir=indeterminatecoverage=99.5;identity=100.0;matches=1361;mismatches=0;indels=0;unknowns=0;Target=FBgn0032030.3 1368 8 .;CDS_Target=FBgn0032030.3 1368 10 .;locus=RLOC_00004843
ChrX	stalkie_big_nohaplotig	exon	91714864	91716224	100	-	.	Parent=FBgn0032030.3.mrna1
ChrX	stalkie_big_nohaplotig	CDS	91714864	91716222	.	-	0	Parent=FBgn0032030.3.mrna1
ChrX	gffcl	locus	91821846	91824981	.	-	.	ID=RLOC_00004844;geneIDs=ORF90.path1;transcripts=ORF90.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91821846	91824981	.	-	.	ID=ORF90.mrna1;geneID=ORF90.path1;Name=ORF90;Dir=sensecoverage=100.0;identity=98.8;matches=3055;mismatches=17;indels=21;unknowns=0;locus=RLOC_00004844
ChrX	stalkie_big_nohaplotig	exon	91821846	91822393	100	-	.	Parent=ORF90.mrna1;Target=ORF90 2546 3093 +
ChrX	stalkie_big_nohaplotig	exon	91822458	91824981	98	-	.	Parent=ORF90.mrna1;Target=ORF90 1 2545 +
ChrX	stalkie_big_nohaplotig	CDS	91821846	91822393	.	-	2	Parent=ORF90.mrna1;Target=ORF90 2546 3093 +
ChrX	stalkie_big_nohaplotig	CDS	91822458	91824981	.	-	0	Parent=ORF90.mrna1;Target=ORF90 1 2545 +
ChrX	gffcl	locus	91836430	93563689	.	-	.	ID=RLOC_00004845;geneIDs=comp122423_c0_seq1.path1;transcripts=comp122423_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91836430	93563689	.	-	.	ID=comp122423_c0_seq1.mrna1;geneID=comp122423_c0_seq1.path1;Name=comp122423_c0_seq1;Dir=indeterminatecoverage=83.0;identity=99.4;matches=1133;mismatches=5;indels=2;unknowns=0;Target=comp122423_c0_seq1 472 365 .;locus=RLOC_00004845
ChrX	stalkie_big_nohaplotig	exon	91836430	91836432	100	-	.	Parent=comp122423_c0_seq1.mrna1;Target=comp122423_c0_seq1 1140 1138 .
ChrX	stalkie_big_nohaplotig	exon	91836964	91836966	100	-	.	Parent=comp122423_c0_seq1.mrna1;Target=comp122423_c0_seq1 1137 1135 .
ChrX	stalkie_big_nohaplotig	exon	91840130	91840134	100	-	.	Parent=comp122423_c0_seq1.mrna1;Target=comp122423_c0_seq1 1134 1130 .
ChrX	stalkie_big_nohaplotig	exon	91841952	91841962	100	-	.	Parent=comp122423_c0_seq1.mrna1;Target=comp122423_c0_seq1 1129 1119 .
ChrX	stalkie_big_nohaplotig	exon	91850910	91850923	68	-	.	Parent=comp122423_c0_seq1.mrna1;Target=comp122423_c0_seq1 1118 1103 .
ChrX	stalkie_big_nohaplotig	exon	91871909	91871915	85	-	.	Parent=comp122423_c0_seq1.mrna1;Target=comp122423_c0_seq1 1102 1096 .
ChrX	stalkie_big_nohaplotig	exon	91873691	91873693	100	-	.	Parent=comp122423_c0_seq1.mrna1;Target=comp122423_c0_seq1 1095 1093 .
ChrX	stalkie_big_nohaplotig	exon	91874669	91874684	93	-	.	Parent=comp122423_c0_seq1.mrna1;Target=comp122423_c0_seq1 1092 1077 .
ChrX	stalkie_big_nohaplotig	exon	91882866	91882869	100	-	.	Parent=comp122423_c0_seq1.mrna1;Target=comp122423_c0_seq1 1076 1073 .
ChrX	stalkie_big_nohaplotig	exon	91884100	91884103	100	-	.	Parent=comp122423_c0_seq1.mrna1;Target=comp122423_c0_seq1 1072 1069 .
ChrX	stalkie_big_nohaplotig	exon	93562622	93563689	100	-	.	Parent=comp122423_c0_seq1.mrna1;Target=comp122423_c0_seq1 1068 1 .
ChrX	stalkie_big_nohaplotig	CDS	93563218	93563325	.	-	0	Parent=comp122423_c0_seq1.mrna1
ChrX	gffcl	locus	91873882	91874229	.	-	.	ID=RLOC_00004846;geneIDs=comp116527_c0_seq1.path1;transcripts=comp116527_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91873882	91874229	.	-	.	ID=comp116527_c0_seq1.mrna1;geneID=comp116527_c0_seq1.path1;Name=comp116527_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=348;mismatches=0;indels=0;unknowns=0;Target=comp116527_c0_seq1 348 1 .;CDS_Target=comp116527_c0_seq1 62 3 .;locus=RLOC_00004846
ChrX	stalkie_big_nohaplotig	exon	91873882	91874229	100	-	.	Parent=comp116527_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	91874168	91874227	.	-	0	Parent=comp116527_c0_seq1.mrna1
ChrX	gffcl	locus	91874782	91875213	.	+	.	ID=RLOC_00004847;geneIDs=comp145361_c0_seq1.path1;transcripts=comp145361_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91874782	91875213	.	+	.	ID=comp145361_c0_seq1.mrna1;geneID=comp145361_c0_seq1.path1;Name=comp145361_c0_seq1;Dir=indeterminatecoverage=89.4;identity=100.0;matches=432;mismatches=0;indels=0;unknowns=0;Target=comp145361_c0_seq1 457 26 .;CDS_Target=comp145361_c0_seq1 282 220 .;locus=RLOC_00004847
ChrX	stalkie_big_nohaplotig	exon	91874782	91875213	100	+	.	Parent=comp145361_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	91874976	91875038	.	+	0	Parent=comp145361_c0_seq1.mrna1
ChrX	gffcl	locus	91875387	91898902	.	-	.	ID=RLOC_00004848;geneIDs=FBgn0003866.1.path1,comp160428_c1_seq1.path1;transcripts=comp160428_c1_seq1.mrna1,FBgn0003866.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91875387	91879061	.	-	.	ID=comp160428_c1_seq1.mrna1;geneID=comp160428_c1_seq1.path1;Name=comp160428_c1_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=3491;mismatches=2;indels=17;unknowns=0;Target=comp160428_c1_seq1 2 367 +;locus=RLOC_00004848
ChrX	stalkie_big_nohaplotig	exon	91875387	91877817	99	-	.	Parent=comp160428_c1_seq1.mrna1;Target=comp160428_c1_seq1 1063 3510 +
ChrX	stalkie_big_nohaplotig	exon	91878000	91879061	100	-	.	Parent=comp160428_c1_seq1.mrna1;Target=comp160428_c1_seq1 1 1062 +
ChrX	stalkie_big_nohaplotig	CDS	91878695	91879060	.	-	0	Parent=comp160428_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91879043	91898902	.	-	.	ID=FBgn0003866.1.mrna1;geneID=FBgn0003866.1.path1;Name=FBgn0003866.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2580;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004848
ChrX	stalkie_big_nohaplotig	exon	91879043	91881530	100	-	.	Parent=FBgn0003866.1.mrna1;Target=FBgn0003866.1 2580 93 .
ChrX	stalkie_big_nohaplotig	exon	91898811	91898902	100	-	.	Parent=FBgn0003866.1.mrna1;Target=FBgn0003866.1 92 1 .
ChrX	stalkie_big_nohaplotig	CDS	91879043	91881530	.	-	1	Parent=FBgn0003866.1.mrna1;Target=FBgn0003866.1 2580 93 .
ChrX	stalkie_big_nohaplotig	CDS	91898811	91898902	.	-	0	Parent=FBgn0003866.1.mrna1;Target=FBgn0003866.1 92 1 .
ChrX	gffcl	locus	91900205	91900706	.	+	.	ID=RLOC_00004849;geneIDs=comp139904_c1_seq1.path1;transcripts=comp139904_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91900205	91900706	.	+	.	ID=comp139904_c1_seq1.mrna1;geneID=comp139904_c1_seq1.path1;Name=comp139904_c1_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=502;mismatches=0;indels=0;unknowns=0;Target=comp139904_c1_seq1 502 1 .;CDS_Target=comp139904_c1_seq1 95 3 .;locus=RLOC_00004849
ChrX	stalkie_big_nohaplotig	exon	91900205	91900706	100	+	.	Parent=comp139904_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	91900207	91900299	.	+	0	Parent=comp139904_c1_seq1.mrna1
ChrX	gffcl	locus	91983850	91987950	.	-	.	ID=RLOC_00004850;geneIDs=comp145225_c0_seq1.path1;transcripts=comp145225_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	91983850	91987950	.	-	.	ID=comp145225_c0_seq1.mrna1;geneID=comp145225_c0_seq1.path1;Name=comp145225_c0_seq1;Dir=sensecoverage=100.0;identity=97.0;matches=1008;mismatches=7;indels=24;unknowns=0;Target=comp145225_c0_seq1 226 387 +;locus=RLOC_00004850
ChrX	stalkie_big_nohaplotig	exon	91983850	91984369	94	-	.	Parent=comp145225_c0_seq1.mrna1;Target=comp145225_c0_seq1 520 1015 +
ChrX	stalkie_big_nohaplotig	exon	91987379	91987500	100	-	.	Parent=comp145225_c0_seq1.mrna1;Target=comp145225_c0_seq1 398 519 +
ChrX	stalkie_big_nohaplotig	exon	91987554	91987950	99	-	.	Parent=comp145225_c0_seq1.mrna1;Target=comp145225_c0_seq1 1 397 +
ChrX	stalkie_big_nohaplotig	CDS	91987564	91987725	.	-	0	Parent=comp145225_c0_seq1.mrna1
ChrX	gffcl	locus	92058615	92059693	.	+	.	ID=RLOC_00004851;geneIDs=Dp_FBgn0249247.11.path1;transcripts=Dp_FBgn0249247.11.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92058615	92059693	.	+	.	ID=Dp_FBgn0249247.11.mrna1;geneID=Dp_FBgn0249247.11.path1;Name=Dp_FBgn0249247.11;Dir=indeterminatecoverage=99.6;identity=98.6;matches=1064;mismatches=15;indels=0;unknowns=0;Target=Dp_FBgn0249247.11 1083 5 .;CDS_Target=Dp_FBgn0249247.11 1083 7 .;locus=RLOC_00004851
ChrX	stalkie_big_nohaplotig	exon	92058615	92059693	98	+	.	Parent=Dp_FBgn0249247.11.mrna1
ChrX	stalkie_big_nohaplotig	CDS	92058617	92059693	.	+	0	Parent=Dp_FBgn0249247.11.mrna1
ChrX	gffcl	locus	92069391	92070493	.	+	.	ID=RLOC_00004852;geneIDs=FBgn0015268.2.path1;transcripts=FBgn0015268.2.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92069391	92070493	.	+	.	ID=FBgn0015268.2.mrna1;geneID=FBgn0015268.2.path1;Name=FBgn0015268.2;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1102;mismatches=1;indels=0;unknowns=0;Target=FBgn0015268.2 1104 2 .;CDS_Target=FBgn0015268.2 1104 4 .;locus=RLOC_00004852
ChrX	stalkie_big_nohaplotig	exon	92069391	92070493	99	+	.	Parent=FBgn0015268.2.mrna1
ChrX	stalkie_big_nohaplotig	CDS	92069393	92070493	.	+	0	Parent=FBgn0015268.2.mrna1
ChrX	gffcl	locus	92085872	93556027	.	-	.	ID=RLOC_00004854;geneIDs=comp158143_c3_seq1.path1;transcripts=comp158143_c3_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92085872	93556027	.	-	.	ID=comp158143_c3_seq1.mrna1;geneID=comp158143_c3_seq1.path1;Name=comp158143_c3_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=854;mismatches=20;indels=5;unknowns=0;Target=comp158143_c3_seq1 413 246 .;locus=RLOC_00004854
ChrX	stalkie_big_nohaplotig	exon	92085872	92086009	82	-	.	Parent=comp158143_c3_seq1.mrna1;Target=comp158143_c3_seq1 877 739 .
ChrX	stalkie_big_nohaplotig	exon	92102150	92102156	100	-	.	Parent=comp158143_c3_seq1.mrna1;Target=comp158143_c3_seq1 738 732 .
ChrX	stalkie_big_nohaplotig	exon	92107677	92107686	90	-	.	Parent=comp158143_c3_seq1.mrna1;Target=comp158143_c3_seq1 731 722 .
ChrX	stalkie_big_nohaplotig	exon	92115740	92115746	100	-	.	Parent=comp158143_c3_seq1.mrna1;Target=comp158143_c3_seq1 721 715 .
ChrX	stalkie_big_nohaplotig	exon	92116848	92116851	100	-	.	Parent=comp158143_c3_seq1.mrna1;Target=comp158143_c3_seq1 714 711 .
ChrX	stalkie_big_nohaplotig	exon	93555318	93556027	100	-	.	Parent=comp158143_c3_seq1.mrna1;Target=comp158143_c3_seq1 710 1 .
ChrX	stalkie_big_nohaplotig	CDS	93555615	93555782	.	-	0	Parent=comp158143_c3_seq1.mrna1
ChrX	gffcl	locus	92173463	92175139	.	+	.	ID=RLOC_00004855;geneIDs=comp155002_c0_seq1.path1;transcripts=comp155002_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92173463	92175139	.	+	.	ID=comp155002_c0_seq1.mrna1;geneID=comp155002_c0_seq1.path1;Name=comp155002_c0_seq1;Dir=indeterminatecoverage=99.4;identity=98.0;matches=1594;mismatches=23;indels=9;unknowns=0;Target=comp155002_c0_seq1 652 524 .;locus=RLOC_00004855
ChrX	stalkie_big_nohaplotig	exon	92173463	92174210	95	+	.	Parent=comp155002_c0_seq1.mrna1;Target=comp155002_c0_seq1 760 4 .
ChrX	stalkie_big_nohaplotig	exon	92174271	92175139	100	+	.	Parent=comp155002_c0_seq1.mrna1;Target=comp155002_c0_seq1 1629 761 .
ChrX	stalkie_big_nohaplotig	CDS	92173975	92174102	.	+	0	Parent=comp155002_c0_seq1.mrna1
ChrX	gffcl	locus	92176115	92177426	.	-	.	ID=RLOC_00004856;geneIDs=FBgn0015268.3.path1;transcripts=FBgn0015268.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92176115	92177426	.	-	.	ID=FBgn0015268.3.mrna1;geneID=FBgn0015268.3.path1;Name=FBgn0015268.3;Dir=sensecoverage=100.0;identity=99.5;matches=1203;mismatches=4;indels=2;unknowns=0;Target=FBgn0015268.3 2 64 +;locus=RLOC_00004856
ChrX	stalkie_big_nohaplotig	exon	92176115	92176905	99	-	.	Parent=FBgn0015268.3.mrna1;Target=FBgn0015268.3 419 1209 +
ChrX	stalkie_big_nohaplotig	exon	92177011	92177426	99	-	.	Parent=FBgn0015268.3.mrna1;Target=FBgn0015268.3 1 418 +
ChrX	stalkie_big_nohaplotig	CDS	92177365	92177425	.	-	0	Parent=FBgn0015268.3.mrna1
ChrX	gffcl	locus	92204876	92205305	.	-	.	ID=RLOC_00004857;geneIDs=comp135378_c0_seq1.path1;transcripts=comp135378_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92204876	92205305	.	-	.	ID=comp135378_c0_seq1.mrna1;geneID=comp135378_c0_seq1.path1;Name=comp135378_c0_seq1;Dir=indeterminatecoverage=99.5;identity=100.0;matches=430;mismatches=0;indels=0;unknowns=0;Target=comp135378_c0_seq1 430 1 .;CDS_Target=comp135378_c0_seq1 259 176 .;locus=RLOC_00004857
ChrX	stalkie_big_nohaplotig	exon	92204876	92205305	100	-	.	Parent=comp135378_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	92205047	92205130	.	-	0	Parent=comp135378_c0_seq1.mrna1
ChrX	gffcl	locus	92220725	92221950	.	-	.	ID=RLOC_00004858;geneIDs=comp146987_c0_seq1.path2,comp148647_c1_seq1.path1;transcripts=comp148647_c1_seq1.mrna1,comp146987_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	92220725	92221950	.	-	.	ID=comp148647_c1_seq1.mrna1;geneID=comp148647_c1_seq1.path1;Name=comp148647_c1_seq1;Dir=sensecoverage=98.1;identity=99.5;matches=824;mismatches=2;indels=2;unknowns=0;locus=RLOC_00004858
ChrX	stalkie_big_nohaplotig	exon	92220725	92220921	100	-	.	Parent=comp148647_c1_seq1.mrna1;Target=comp148647_c1_seq1 648 844 +
ChrX	stalkie_big_nohaplotig	exon	92220988	92221215	100	-	.	Parent=comp148647_c1_seq1.mrna1;Target=comp148647_c1_seq1 420 647 +
ChrX	stalkie_big_nohaplotig	exon	92221482	92221649	100	-	.	Parent=comp148647_c1_seq1.mrna1;Target=comp148647_c1_seq1 252 419 +
ChrX	stalkie_big_nohaplotig	exon	92221718	92221950	98	-	.	Parent=comp148647_c1_seq1.mrna1;Target=comp148647_c1_seq1 17 251 +
ChrX	stalkie_big_nohaplotig	CDS	92220829	92220921	.	-	0	Parent=comp148647_c1_seq1.mrna1;Target=comp148647_c1_seq1 648 740 +
ChrX	stalkie_big_nohaplotig	CDS	92220988	92221215	.	-	0	Parent=comp148647_c1_seq1.mrna1;Target=comp148647_c1_seq1 420 647 +
ChrX	stalkie_big_nohaplotig	CDS	92221482	92221649	.	-	0	Parent=comp148647_c1_seq1.mrna1;Target=comp148647_c1_seq1 252 419 +
ChrX	stalkie_big_nohaplotig	CDS	92221718	92221840	.	-	0	Parent=comp148647_c1_seq1.mrna1;Target=comp148647_c1_seq1 129 251 +
ChrX	stalkie_big_nohaplotig	mRNA	92221194	92221261	.	-	.	ID=comp146987_c0_seq1.mrna2;geneID=comp146987_c0_seq1.path2;Name=comp146987_c0_seq1;Dir=indeterminatecoverage=11.1;identity=100.0;matches=68;mismatches=0;indels=0;unknowns=0;Target=comp146987_c0_seq1 612 545 .;locus=RLOC_00004858
ChrX	stalkie_big_nohaplotig	exon	92221194	92221261	100	-	.	Parent=comp146987_c0_seq1.mrna2
ChrX	gffcl	locus	92222543	92222767	.	+	.	ID=RLOC_00004859;geneIDs=comp148830_c1_seq1.path2;transcripts=comp148830_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	92222543	92222767	.	+	.	ID=comp148830_c1_seq1.mrna2;geneID=comp148830_c1_seq1.path2;Name=comp148830_c1_seq1;Dir=indeterminatecoverage=74.0;identity=99.6;matches=224;mismatches=1;indels=0;unknowns=0;Target=comp148830_c1_seq1 304 80 .;CDS_Target=comp148830_c1_seq1 279 247 .;locus=RLOC_00004859
ChrX	stalkie_big_nohaplotig	exon	92222543	92222767	99	+	.	Parent=comp148830_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	92222710	92222742	.	+	0	Parent=comp148830_c1_seq1.mrna2
ChrX	gffcl	locus	92222817	92224376	.	+	.	ID=RLOC_00004860;geneIDs=comp155140_c0_seq1.path1;transcripts=comp155140_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92222817	92224376	.	+	.	ID=comp155140_c0_seq1.mrna1;geneID=comp155140_c0_seq1.path1;Name=comp155140_c0_seq1;Dir=indeterminatecoverage=98.1;identity=99.9;matches=1560;mismatches=0;indels=1;unknowns=0;Target=comp155140_c0_seq1 1561 1 .;CDS_Target=comp155140_c0_seq1 332 153 .;locus=RLOC_00004860
ChrX	stalkie_big_nohaplotig	exon	92222817	92224376	99	+	.	Parent=comp155140_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	92222969	92223148	.	+	0	Parent=comp155140_c0_seq1.mrna1
ChrX	gffcl	locus	92224609	92224901	.	-	.	ID=RLOC_00004861;geneIDs=comp135332_c0_seq1.path1;transcripts=comp135332_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92224609	92224901	.	-	.	ID=comp135332_c0_seq1.mrna1;geneID=comp135332_c0_seq1.path1;Name=comp135332_c0_seq1;Dir=indeterminatecoverage=95.8;identity=100.0;matches=293;mismatches=0;indels=0;unknowns=0;Target=comp135332_c0_seq1 306 14 .;CDS_Target=comp135332_c0_seq1 302 255 .;locus=RLOC_00004861
ChrX	stalkie_big_nohaplotig	exon	92224609	92224901	100	-	.	Parent=comp135332_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	92224613	92224660	.	-	0	Parent=comp135332_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92224905	94084311	.	+	.	ID=comp134769_c0_seq1.mrna1;geneID=comp134769_c0_seq1.path1;Name=comp134769_c0_seq1;Dir=sensecoverage=90.8;identity=98.5;matches=1154;mismatches=5;indels=12;unknowns=0;Target=comp134769_c0_seq1 503 607 +;locus=RLOC_00004862
ChrX	stalkie_big_nohaplotig	exon	92224905	92225963	100	+	.	Parent=comp134769_c0_seq1.mrna1;Target=comp134769_c0_seq1 1 1059 +
ChrX	stalkie_big_nohaplotig	exon	94022688	94022693	100	+	.	Parent=comp134769_c0_seq1.mrna1;Target=comp134769_c0_seq1 1060 1065 +
ChrX	stalkie_big_nohaplotig	exon	94027735	94027736	100	+	.	Parent=comp134769_c0_seq1.mrna1;Target=comp134769_c0_seq1 1066 1067 +
ChrX	stalkie_big_nohaplotig	exon	94033110	94033120	81	+	.	Parent=comp134769_c0_seq1.mrna1;Target=comp134769_c0_seq1 1068 1078 +
ChrX	stalkie_big_nohaplotig	exon	94037370	94037375	100	+	.	Parent=comp134769_c0_seq1.mrna1;Target=comp134769_c0_seq1 1079 1084 +
ChrX	stalkie_big_nohaplotig	exon	94041764	94041774	100	+	.	Parent=comp134769_c0_seq1.mrna1;Target=comp134769_c0_seq1 1085 1095 +
ChrX	stalkie_big_nohaplotig	exon	94042018	94042032	48	+	.	Parent=comp134769_c0_seq1.mrna1;Target=comp134769_c0_seq1 1096 1122 +
ChrX	stalkie_big_nohaplotig	exon	94044631	94044633	100	+	.	Parent=comp134769_c0_seq1.mrna1;Target=comp134769_c0_seq1 1123 1125 +
ChrX	stalkie_big_nohaplotig	exon	94049171	94049180	90	+	.	Parent=comp134769_c0_seq1.mrna1;Target=comp134769_c0_seq1 1126 1135 +
ChrX	stalkie_big_nohaplotig	exon	94059772	94059773	100	+	.	Parent=comp134769_c0_seq1.mrna1;Target=comp134769_c0_seq1 1136 1137 +
ChrX	stalkie_big_nohaplotig	exon	94064836	94064844	100	+	.	Parent=comp134769_c0_seq1.mrna1;Target=comp134769_c0_seq1 1138 1146 +
ChrX	stalkie_big_nohaplotig	exon	94067854	94067863	100	+	.	Parent=comp134769_c0_seq1.mrna1;Target=comp134769_c0_seq1 1147 1156 +
ChrX	stalkie_big_nohaplotig	exon	94083155	94083159	100	+	.	Parent=comp134769_c0_seq1.mrna1;Target=comp134769_c0_seq1 1157 1161 +
ChrX	stalkie_big_nohaplotig	exon	94084302	94084311	100	+	.	Parent=comp134769_c0_seq1.mrna1;Target=comp134769_c0_seq1 1162 1171 +
ChrX	stalkie_big_nohaplotig	CDS	92225407	92225511	.	+	0	Parent=comp134769_c0_seq1.mrna1
ChrX	gffcl	locus	92227087	92227613	.	+	.	ID=RLOC_00004863;geneIDs=comp90306_c0_seq1.path1;transcripts=comp90306_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92227087	92227613	.	+	.	ID=comp90306_c0_seq1.mrna1;geneID=comp90306_c0_seq1.path1;Name=comp90306_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=527;mismatches=0;indels=0;unknowns=0;Target=comp90306_c0_seq1 527 1 .;CDS_Target=comp90306_c0_seq1 525 400 .;locus=RLOC_00004863
ChrX	stalkie_big_nohaplotig	exon	92227087	92227613	100	+	.	Parent=comp90306_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	92227486	92227611	.	+	0	Parent=comp90306_c0_seq1.mrna1
ChrX	gffcl	locus	92228905	92229301	.	-	.	ID=RLOC_00004864;geneIDs=comp131178_c0_seq1.path1;transcripts=comp131178_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92228905	92229301	.	-	.	ID=comp131178_c0_seq1.mrna1;geneID=comp131178_c0_seq1.path1;Name=comp131178_c0_seq1;Dir=indeterminatecoverage=87.3;identity=100.0;matches=397;mismatches=0;indels=0;unknowns=0;Target=comp131178_c0_seq1 455 59 .;CDS_Target=comp131178_c0_seq1 111 61 .;locus=RLOC_00004864
ChrX	stalkie_big_nohaplotig	exon	92228905	92229301	100	-	.	Parent=comp131178_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	92229249	92229299	.	-	0	Parent=comp131178_c0_seq1.mrna1
ChrX	gffcl	locus	92229928	92238575	.	-	.	ID=RLOC_00004865;geneIDs=FBgn0024734.1.path1;transcripts=FBgn0024734.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92229928	92238575	.	-	.	ID=FBgn0024734.1.mrna1;geneID=FBgn0024734.1.path1;Name=FBgn0024734.1;Dir=sensecoverage=100.0;identity=100.0;matches=534;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004865
ChrX	stalkie_big_nohaplotig	exon	92229928	92230036	100	-	.	Parent=FBgn0024734.1.mrna1;Target=FBgn0024734.1 426 534 +
ChrX	stalkie_big_nohaplotig	exon	92230105	92230236	100	-	.	Parent=FBgn0024734.1.mrna1;Target=FBgn0024734.1 294 425 +
ChrX	stalkie_big_nohaplotig	exon	92238208	92238374	100	-	.	Parent=FBgn0024734.1.mrna1;Target=FBgn0024734.1 127 293 +
ChrX	stalkie_big_nohaplotig	exon	92238450	92238575	100	-	.	Parent=FBgn0024734.1.mrna1;Target=FBgn0024734.1 1 126 +
ChrX	stalkie_big_nohaplotig	CDS	92229928	92230036	.	-	1	Parent=FBgn0024734.1.mrna1;Target=FBgn0024734.1 426 534 +
ChrX	stalkie_big_nohaplotig	CDS	92230105	92230236	.	-	1	Parent=FBgn0024734.1.mrna1;Target=FBgn0024734.1 294 425 +
ChrX	stalkie_big_nohaplotig	CDS	92238208	92238374	.	-	0	Parent=FBgn0024734.1.mrna1;Target=FBgn0024734.1 127 293 +
ChrX	stalkie_big_nohaplotig	CDS	92238450	92238575	.	-	0	Parent=FBgn0024734.1.mrna1;Target=FBgn0024734.1 1 126 +
ChrX	gffcl	locus	92233360	92233885	.	-	.	ID=RLOC_00004866;geneIDs=comp149948_c1_seq1.path1;transcripts=comp149948_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92233360	92233885	.	-	.	ID=comp149948_c1_seq1.mrna1;geneID=comp149948_c1_seq1.path1;Name=comp149948_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=523;mismatches=1;indels=2;unknowns=0;Target=comp149948_c1_seq1 524 1 .;CDS_Target=comp149948_c1_seq1 197 48 .;locus=RLOC_00004866
ChrX	stalkie_big_nohaplotig	exon	92233360	92233885	99	-	.	Parent=comp149948_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	92233689	92233838	.	-	0	Parent=comp149948_c1_seq1.mrna1
ChrX	gffcl	locus	92234419	92235072	.	-	.	ID=RLOC_00004867;geneIDs=comp118014_c0_seq1.path1;transcripts=comp118014_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92234419	92235072	.	-	.	ID=comp118014_c0_seq1.mrna1;geneID=comp118014_c0_seq1.path1;Name=comp118014_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=648;mismatches=6;indels=1;unknowns=0;Target=comp118014_c0_seq1 655 1 .;CDS_Target=comp118014_c0_seq1 112 2 .;locus=RLOC_00004867
ChrX	stalkie_big_nohaplotig	exon	92234419	92235072	98	-	.	Parent=comp118014_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	92234961	92235071	.	-	0	Parent=comp118014_c0_seq1.mrna1
ChrX	gffcl	locus	92236578	92237290	.	+	.	ID=RLOC_00004868;geneIDs=comp118323_c0_seq1.path1;transcripts=comp118323_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92236578	92237290	.	+	.	ID=comp118323_c0_seq1.mrna1;geneID=comp118323_c0_seq1.path1;Name=comp118323_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=713;mismatches=0;indels=0;unknowns=0;Target=comp118323_c0_seq1 713 1 .;CDS_Target=comp118323_c0_seq1 533 234 .;locus=RLOC_00004868
ChrX	stalkie_big_nohaplotig	exon	92236578	92237290	100	+	.	Parent=comp118323_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	92236811	92237110	.	+	0	Parent=comp118323_c0_seq1.mrna1
ChrX	gffcl	locus	92256880	92263305	.	-	.	ID=RLOC_00004869;geneIDs=comp153349_c0_seq1.path1;transcripts=comp153349_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92256880	92263305	.	-	.	ID=comp153349_c0_seq1.mrna1;geneID=comp153349_c0_seq1.path1;Name=comp153349_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=450;mismatches=0;indels=2;unknowns=0;Target=comp153349_c0_seq1 66 146 .;locus=RLOC_00004869
ChrX	stalkie_big_nohaplotig	exon	92256880	92256900	100	-	.	Parent=comp153349_c0_seq1.mrna1;Target=comp153349_c0_seq1 1 21 -
ChrX	stalkie_big_nohaplotig	exon	92262877	92263305	99	-	.	Parent=comp153349_c0_seq1.mrna1;Target=comp153349_c0_seq1 22 452 -
ChrX	stalkie_big_nohaplotig	CDS	92262921	92263000	.	-	0	Parent=comp153349_c0_seq1.mrna1
ChrX	gffcl	locus	92380277	92381148	.	+	.	ID=RLOC_00004870;geneIDs=FBgn0032077.1.path1;transcripts=FBgn0032077.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92380277	92381148	.	+	.	ID=FBgn0032077.1.mrna1;geneID=FBgn0032077.1.path1;Name=FBgn0032077.1;Dir=sensecoverage=100.0;identity=100.0;matches=678;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004870
ChrX	stalkie_big_nohaplotig	exon	92380277	92380396	100	+	.	Parent=FBgn0032077.1.mrna1;Target=FBgn0032077.1 1 120 +
ChrX	stalkie_big_nohaplotig	exon	92380463	92380713	100	+	.	Parent=FBgn0032077.1.mrna1;Target=FBgn0032077.1 121 371 +
ChrX	stalkie_big_nohaplotig	exon	92380780	92380926	100	+	.	Parent=FBgn0032077.1.mrna1;Target=FBgn0032077.1 372 518 +
ChrX	stalkie_big_nohaplotig	exon	92380989	92381148	100	+	.	Parent=FBgn0032077.1.mrna1;Target=FBgn0032077.1 519 678 +
ChrX	stalkie_big_nohaplotig	CDS	92380277	92380396	.	+	0	Parent=FBgn0032077.1.mrna1;Target=FBgn0032077.1 1 120 +
ChrX	stalkie_big_nohaplotig	CDS	92380463	92380713	.	+	0	Parent=FBgn0032077.1.mrna1;Target=FBgn0032077.1 121 371 +
ChrX	stalkie_big_nohaplotig	CDS	92380780	92380926	.	+	1	Parent=FBgn0032077.1.mrna1;Target=FBgn0032077.1 372 518 +
ChrX	stalkie_big_nohaplotig	CDS	92380989	92381148	.	+	1	Parent=FBgn0032077.1.mrna1;Target=FBgn0032077.1 519 678 +
ChrX	gffcl	locus	92392588	92404557	.	-	.	ID=RLOC_00004872;geneIDs=FBgn0032075.1.path1;transcripts=FBgn0032075.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92392588	92404557	.	-	.	ID=FBgn0032075.1.mrna1;geneID=FBgn0032075.1.path1;Name=FBgn0032075.1;Dir=sensecoverage=100.0;identity=100.0;matches=960;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004872
ChrX	stalkie_big_nohaplotig	exon	92392588	92392818	100	-	.	Parent=FBgn0032075.1.mrna1;Target=FBgn0032075.1 730 960 +
ChrX	stalkie_big_nohaplotig	exon	92392887	92393126	100	-	.	Parent=FBgn0032075.1.mrna1;Target=FBgn0032075.1 490 729 +
ChrX	stalkie_big_nohaplotig	exon	92393195	92393365	100	-	.	Parent=FBgn0032075.1.mrna1;Target=FBgn0032075.1 319 489 +
ChrX	stalkie_big_nohaplotig	exon	92393428	92393616	100	-	.	Parent=FBgn0032075.1.mrna1;Target=FBgn0032075.1 130 318 +
ChrX	stalkie_big_nohaplotig	exon	92404429	92404557	100	-	.	Parent=FBgn0032075.1.mrna1;Target=FBgn0032075.1 1 129 +
ChrX	stalkie_big_nohaplotig	CDS	92392588	92392818	.	-	0	Parent=FBgn0032075.1.mrna1;Target=FBgn0032075.1 730 960 +
ChrX	stalkie_big_nohaplotig	CDS	92392887	92393126	.	-	0	Parent=FBgn0032075.1.mrna1;Target=FBgn0032075.1 490 729 +
ChrX	stalkie_big_nohaplotig	CDS	92393195	92393365	.	-	0	Parent=FBgn0032075.1.mrna1;Target=FBgn0032075.1 319 489 +
ChrX	stalkie_big_nohaplotig	CDS	92393428	92393616	.	-	0	Parent=FBgn0032075.1.mrna1;Target=FBgn0032075.1 130 318 +
ChrX	stalkie_big_nohaplotig	CDS	92404429	92404557	.	-	0	Parent=FBgn0032075.1.mrna1;Target=FBgn0032075.1 1 129 +
ChrX	gffcl	locus	92420594	92425285	.	-	.	ID=RLOC_00004873;geneIDs=FBgn0032074.1.path1;transcripts=FBgn0032074.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92420594	92425285	.	-	.	ID=FBgn0032074.1.mrna1;geneID=FBgn0032074.1.path1;Name=FBgn0032074.1;Dir=sensecoverage=100.0;identity=100.0;matches=759;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004873
ChrX	stalkie_big_nohaplotig	exon	92420594	92420665	100	-	.	Parent=FBgn0032074.1.mrna1;Target=FBgn0032074.1 688 759 +
ChrX	stalkie_big_nohaplotig	exon	92420728	92420958	100	-	.	Parent=FBgn0032074.1.mrna1;Target=FBgn0032074.1 457 687 +
ChrX	stalkie_big_nohaplotig	exon	92421028	92421393	100	-	.	Parent=FBgn0032074.1.mrna1;Target=FBgn0032074.1 91 456 +
ChrX	stalkie_big_nohaplotig	exon	92425196	92425285	100	-	.	Parent=FBgn0032074.1.mrna1;Target=FBgn0032074.1 1 90 +
ChrX	stalkie_big_nohaplotig	CDS	92420594	92420665	.	-	0	Parent=FBgn0032074.1.mrna1;Target=FBgn0032074.1 688 759 +
ChrX	stalkie_big_nohaplotig	CDS	92420728	92420958	.	-	0	Parent=FBgn0032074.1.mrna1;Target=FBgn0032074.1 457 687 +
ChrX	stalkie_big_nohaplotig	CDS	92421028	92421393	.	-	0	Parent=FBgn0032074.1.mrna1;Target=FBgn0032074.1 91 456 +
ChrX	stalkie_big_nohaplotig	CDS	92425196	92425285	.	-	0	Parent=FBgn0032074.1.mrna1;Target=FBgn0032074.1 1 90 +
ChrX	gffcl	locus	92460062	92473477	.	-	.	ID=RLOC_00004874;geneIDs=comp161535_c0_seq1.path1;transcripts=comp161535_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92460062	92473477	.	-	.	ID=comp161535_c0_seq1.mrna1;geneID=comp161535_c0_seq1.path1;Name=comp161535_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=2694;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004874
ChrX	stalkie_big_nohaplotig	exon	92460062	92461167	100	-	.	Parent=comp161535_c0_seq1.mrna1;Target=comp161535_c0_seq1 1 1106 -
ChrX	stalkie_big_nohaplotig	exon	92468038	92468215	100	-	.	Parent=comp161535_c0_seq1.mrna1;Target=comp161535_c0_seq1 1107 1284 -
ChrX	stalkie_big_nohaplotig	exon	92472017	92472839	100	-	.	Parent=comp161535_c0_seq1.mrna1;Target=comp161535_c0_seq1 1285 2107 -
ChrX	stalkie_big_nohaplotig	exon	92472891	92473477	100	-	.	Parent=comp161535_c0_seq1.mrna1;Target=comp161535_c0_seq1 2108 2694 -
ChrX	stalkie_big_nohaplotig	CDS	92461044	92461167	.	-	1	Parent=comp161535_c0_seq1.mrna1;Target=comp161535_c0_seq1 983 1106 .
ChrX	stalkie_big_nohaplotig	CDS	92468038	92468215	.	-	2	Parent=comp161535_c0_seq1.mrna1;Target=comp161535_c0_seq1 1107 1284 .
ChrX	stalkie_big_nohaplotig	CDS	92472017	92472839	.	-	0	Parent=comp161535_c0_seq1.mrna1;Target=comp161535_c0_seq1 1285 2107 .
ChrX	stalkie_big_nohaplotig	CDS	92472891	92473475	.	-	0	Parent=comp161535_c0_seq1.mrna1;Target=comp161535_c0_seq1 2108 2692 .
ChrX	gffcl	locus	92473488	92511357	.	-	.	ID=RLOC_00004875;geneIDs=FBgn0085427.1.path1;transcripts=FBgn0085427.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92473488	92511357	.	-	.	ID=FBgn0085427.1.mrna1;geneID=FBgn0085427.1.path1;Name=FBgn0085427.1;Dir=sensecoverage=100.0;identity=100.0;matches=3677;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004875
ChrX	stalkie_big_nohaplotig	exon	92473488	92473549	100	-	.	Parent=FBgn0085427.1.mrna1;Target=FBgn0085427.1 3617 3678 +
ChrX	stalkie_big_nohaplotig	exon	92473710	92473838	100	-	.	Parent=FBgn0085427.1.mrna1;Target=FBgn0085427.1 3488 3616 +
ChrX	stalkie_big_nohaplotig	exon	92477492	92477635	100	-	.	Parent=FBgn0085427.1.mrna1;Target=FBgn0085427.1 3344 3487 +
ChrX	stalkie_big_nohaplotig	exon	92477727	92477840	100	-	.	Parent=FBgn0085427.1.mrna1;Target=FBgn0085427.1 3230 3343 +
ChrX	stalkie_big_nohaplotig	exon	92477895	92479546	100	-	.	Parent=FBgn0085427.1.mrna1;Target=FBgn0085427.1 1578 3229 +
ChrX	stalkie_big_nohaplotig	exon	92480447	92481135	99	-	.	Parent=FBgn0085427.1.mrna1;Target=FBgn0085427.1 889 1577 +
ChrX	stalkie_big_nohaplotig	exon	92486016	92486627	100	-	.	Parent=FBgn0085427.1.mrna1;Target=FBgn0085427.1 277 888 +
ChrX	stalkie_big_nohaplotig	exon	92511082	92511357	100	-	.	Parent=FBgn0085427.1.mrna1;Target=FBgn0085427.1 1 276 +
ChrX	stalkie_big_nohaplotig	CDS	92473488	92473549	.	-	2	Parent=FBgn0085427.1.mrna1;Target=FBgn0085427.1 3617 3678 +
ChrX	stalkie_big_nohaplotig	CDS	92473710	92473838	.	-	2	Parent=FBgn0085427.1.mrna1;Target=FBgn0085427.1 3488 3616 +
ChrX	stalkie_big_nohaplotig	CDS	92477492	92477635	.	-	2	Parent=FBgn0085427.1.mrna1;Target=FBgn0085427.1 3344 3487 +
ChrX	stalkie_big_nohaplotig	CDS	92477727	92477840	.	-	2	Parent=FBgn0085427.1.mrna1;Target=FBgn0085427.1 3230 3343 +
ChrX	stalkie_big_nohaplotig	CDS	92477895	92479546	.	-	1	Parent=FBgn0085427.1.mrna1;Target=FBgn0085427.1 1578 3229 +
ChrX	stalkie_big_nohaplotig	CDS	92480447	92481135	.	-	0	Parent=FBgn0085427.1.mrna1;Target=FBgn0085427.1 889 1577 +
ChrX	stalkie_big_nohaplotig	CDS	92486016	92486627	.	-	0	Parent=FBgn0085427.1.mrna1;Target=FBgn0085427.1 277 888 +
ChrX	stalkie_big_nohaplotig	CDS	92511082	92511357	.	-	0	Parent=FBgn0085427.1.mrna1;Target=FBgn0085427.1 1 276 +
ChrX	gffcl	locus	92526250	92535300	.	+	.	ID=RLOC_00004876;geneIDs=comp97434_c0_seq1.path1,comp134673_c0_seq1.path1;transcripts=comp134673_c0_seq1.mrna1,comp97434_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92526250	92527080	.	+	.	ID=comp134673_c0_seq1.mrna1;geneID=comp134673_c0_seq1.path1;Name=comp134673_c0_seq1;Dir=sensecoverage=96.7;identity=99.7;matches=721;mismatches=2;indels=0;unknowns=0;locus=RLOC_00004876
ChrX	stalkie_big_nohaplotig	exon	92526250	92526509	99	+	.	Parent=comp134673_c0_seq1.mrna1;Target=comp134673_c0_seq1 14 273 +
ChrX	stalkie_big_nohaplotig	exon	92526564	92526651	100	+	.	Parent=comp134673_c0_seq1.mrna1;Target=comp134673_c0_seq1 274 361 +
ChrX	stalkie_big_nohaplotig	exon	92526706	92527080	99	+	.	Parent=comp134673_c0_seq1.mrna1;Target=comp134673_c0_seq1 362 736 +
ChrX	stalkie_big_nohaplotig	CDS	92526381	92526509	.	+	0	Parent=comp134673_c0_seq1.mrna1;Target=comp134673_c0_seq1 145 273 +
ChrX	stalkie_big_nohaplotig	CDS	92526564	92526651	.	+	0	Parent=comp134673_c0_seq1.mrna1;Target=comp134673_c0_seq1 274 361 +
ChrX	stalkie_big_nohaplotig	CDS	92526706	92526944	.	+	2	Parent=comp134673_c0_seq1.mrna1;Target=comp134673_c0_seq1 362 600 +
ChrX	stalkie_big_nohaplotig	mRNA	92526631	92535300	.	+	.	ID=comp97434_c0_seq1.mrna1;geneID=comp97434_c0_seq1.path1;Name=comp97434_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=532;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004876
ChrX	stalkie_big_nohaplotig	exon	92526631	92526651	100	+	.	Parent=comp97434_c0_seq1.mrna1;Target=comp97434_c0_seq1 1 21 +
ChrX	stalkie_big_nohaplotig	exon	92534790	92535300	100	+	.	Parent=comp97434_c0_seq1.mrna1;Target=comp97434_c0_seq1 22 532 +
ChrX	stalkie_big_nohaplotig	CDS	92526633	92526651	.	+	0	Parent=comp97434_c0_seq1.mrna1;Target=comp97434_c0_seq1 3 21 +
ChrX	stalkie_big_nohaplotig	CDS	92534790	92535166	.	+	2	Parent=comp97434_c0_seq1.mrna1;Target=comp97434_c0_seq1 22 398 +
ChrX	gffcl	locus	92564512	92565405	.	+	.	ID=RLOC_00004877;geneIDs=ORF2235.path1;transcripts=ORF2235.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92564512	92565405	.	+	.	ID=ORF2235.mrna1;geneID=ORF2235.path1;Name=ORF2235;Dir=indeterminatecoverage=100.0;identity=99.8;matches=892;mismatches=2;indels=0;unknowns=0;Target=ORF2235 894 1 .;locus=RLOC_00004877
ChrX	stalkie_big_nohaplotig	exon	92564512	92565405	99	+	.	Parent=ORF2235.mrna1
ChrX	stalkie_big_nohaplotig	CDS	92564512	92565405	.	+	0	Parent=ORF2235.mrna1
ChrX	gffcl	locus	92639740	92641252	.	+	.	ID=RLOC_00004878;geneIDs=comp150465_c0_seq1.path1;transcripts=comp150465_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92639740	92641252	.	+	.	ID=comp150465_c0_seq1.mrna1;geneID=comp150465_c0_seq1.path1;Name=comp150465_c0_seq1;Dir=sensecoverage=99.9;identity=99.9;matches=1443;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004878
ChrX	stalkie_big_nohaplotig	exon	92639740	92640029	100	+	.	Parent=comp150465_c0_seq1.mrna1;Target=comp150465_c0_seq1 2 291 +
ChrX	stalkie_big_nohaplotig	exon	92640099	92641252	99	+	.	Parent=comp150465_c0_seq1.mrna1;Target=comp150465_c0_seq1 292 1445 +
ChrX	stalkie_big_nohaplotig	CDS	92639865	92640029	.	+	0	Parent=comp150465_c0_seq1.mrna1;Target=comp150465_c0_seq1 127 291 +
ChrX	stalkie_big_nohaplotig	CDS	92640099	92640398	.	+	0	Parent=comp150465_c0_seq1.mrna1;Target=comp150465_c0_seq1 292 591 +
ChrX	gffcl	locus	92641327	92641599	.	-	.	ID=RLOC_00004879;geneIDs=comp162094_c2_seq1.path1;transcripts=comp162094_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92641327	92641599	.	-	.	ID=comp162094_c2_seq1.mrna1;geneID=comp162094_c2_seq1.path1;Name=comp162094_c2_seq1;Dir=indeterminatecoverage=33.6;identity=100.0;matches=273;mismatches=0;indels=0;unknowns=0;Target=comp162094_c2_seq1 273 1 .;locus=RLOC_00004879
ChrX	stalkie_big_nohaplotig	exon	92641327	92641599	100	-	.	Parent=comp162094_c2_seq1.mrna1
ChrX	gffcl	locus	92653212	92655411	.	-	.	ID=RLOC_00004880;geneIDs=comp149571_c1_seq1.path1;transcripts=comp149571_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92653212	92655411	.	-	.	ID=comp149571_c1_seq1.mrna1;geneID=comp149571_c1_seq1.path1;Name=comp149571_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2197;mismatches=3;indels=0;unknowns=0;Target=comp149571_c1_seq1 2200 1 .;CDS_Target=comp149571_c1_seq1 1757 1557 .;locus=RLOC_00004880
ChrX	stalkie_big_nohaplotig	exon	92653212	92655411	99	-	.	Parent=comp149571_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	92653655	92653855	.	-	0	Parent=comp149571_c1_seq1.mrna1
ChrX	gffcl	locus	92675784	92676452	.	-	.	ID=RLOC_00004881;geneIDs=FBgn0031781.1.path2;transcripts=FBgn0031781.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	92675784	92676452	.	-	.	ID=FBgn0031781.1.mrna2;geneID=FBgn0031781.1.path2;Name=FBgn0031781.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=664;mismatches=5;indels=0;unknowns=0;Target=FBgn0031781.1 669 1 .;locus=RLOC_00004881
ChrX	stalkie_big_nohaplotig	exon	92675784	92676452	99	-	.	Parent=FBgn0031781.1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	92675784	92676452	.	-	0	Parent=FBgn0031781.1.mrna2
ChrX	gffcl	locus	92691285	92691650	.	-	.	ID=RLOC_00004883;geneIDs=comp155434_c0_seq1.path2;transcripts=comp155434_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	92691285	92691650	.	-	.	ID=comp155434_c0_seq1.mrna2;geneID=comp155434_c0_seq1.path2;Name=comp155434_c0_seq1;Dir=indeterminatecoverage=56.7;identity=94.8;matches=347;mismatches=19;indels=0;unknowns=0;Target=comp155434_c0_seq1 550 185 .;CDS_Target=comp155434_c0_seq1 406 191 .;locus=RLOC_00004883
ChrX	stalkie_big_nohaplotig	exon	92691285	92691650	94	-	.	Parent=comp155434_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	92691429	92691644	.	-	0	Parent=comp155434_c0_seq1.mrna2
ChrX	gffcl	locus	92699960	92700628	.	-	.	ID=RLOC_00004884;geneIDs=FBgn0031781.1.path3;transcripts=FBgn0031781.1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	92699960	92700628	.	-	.	ID=FBgn0031781.1.mrna3;geneID=FBgn0031781.1.path3;Name=FBgn0031781.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=664;mismatches=5;indels=0;unknowns=0;Target=FBgn0031781.1 669 1 .;locus=RLOC_00004884
ChrX	stalkie_big_nohaplotig	exon	92699960	92700628	99	-	.	Parent=FBgn0031781.1.mrna3
ChrX	stalkie_big_nohaplotig	CDS	92699960	92700628	.	-	0	Parent=FBgn0031781.1.mrna3
ChrX	gffcl	locus	92714765	92715438	.	-	.	ID=RLOC_00004886;geneIDs=comp148988_c0_seq1.path2;transcripts=comp148988_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	92714765	92715438	.	-	.	ID=comp148988_c0_seq1.mrna2;geneID=comp148988_c0_seq1.path2;Name=comp148988_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=663;mismatches=11;indels=0;unknowns=0;Target=comp148988_c0_seq1 674 1 .;CDS_Target=comp148988_c0_seq1 313 200 .;locus=RLOC_00004886
ChrX	stalkie_big_nohaplotig	exon	92714765	92715438	98	-	.	Parent=comp148988_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	92715126	92715239	.	-	0	Parent=comp148988_c0_seq1.mrna2
ChrX	gffcl	locus	92720957	92721531	.	+	.	ID=RLOC_00004887;geneIDs=comp153842_c0_seq1.path1;transcripts=comp153842_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92720957	92721531	.	+	.	ID=comp153842_c0_seq1.mrna1;geneID=comp153842_c0_seq1.path1;Name=comp153842_c0_seq1;Dir=indeterminatecoverage=90.3;identity=100.0;matches=575;mismatches=0;indels=0;unknowns=0;Target=comp153842_c0_seq1 637 63 .;CDS_Target=comp153842_c0_seq1 261 136 .;locus=RLOC_00004887
ChrX	stalkie_big_nohaplotig	exon	92720957	92721531	100	+	.	Parent=comp153842_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	92721030	92721155	.	+	0	Parent=comp153842_c0_seq1.mrna1
ChrX	gffcl	locus	92725762	92726431	.	.	.	ID=RLOC_00004888;geneIDs=Dv_FBgn0204253.1.path2,comp162835_c1_seq1.path1;transcripts=comp162835_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92725762	92726431	.	-	.	ID=comp162835_c1_seq1.mrna1;geneID=comp162835_c1_seq1.path1;Name=comp162835_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=652;mismatches=17;indels=1;unknowns=0;Target=comp162835_c1_seq1 669 1 .;CDS_Target=comp162835_c1_seq1 668 522 .;locus=RLOC_00004888
ChrX	stalkie_big_nohaplotig	exon	92725762	92726431	97	-	.	Parent=comp162835_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	92725763	92725909	.	-	0	Parent=comp162835_c1_seq1.mrna1
ChrX	gffcl	locus	92729432	92731369	.	.	.	ID=RLOC_00004889;geneIDs=Dv_FBgn0201266.3.path1,comp158499_c0_seq1.path3;transcripts=Dv_FBgn0201266.3.mrna1,comp158499_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	92729432	92731369	.	+	.	ID=Dv_FBgn0201266.3.mrna1;geneID=Dv_FBgn0201266.3.path1;Name=Dv_FBgn0201266.3;Dir=sensecoverage=100.0;identity=99.3;matches=1347;mismatches=9;indels=0;unknowns=0;locus=RLOC_00004889
ChrX	stalkie_big_nohaplotig	exon	92729432	92729638	98	+	.	Parent=Dv_FBgn0201266.3.mrna1;Target=Dv_FBgn0201266.3 1 207 +
ChrX	stalkie_big_nohaplotig	exon	92729696	92730095	99	+	.	Parent=Dv_FBgn0201266.3.mrna1;Target=Dv_FBgn0201266.3 208 607 +
ChrX	stalkie_big_nohaplotig	exon	92730150	92730252	99	+	.	Parent=Dv_FBgn0201266.3.mrna1;Target=Dv_FBgn0201266.3 608 710 +
ChrX	stalkie_big_nohaplotig	exon	92730326	92730870	99	+	.	Parent=Dv_FBgn0201266.3.mrna1;Target=Dv_FBgn0201266.3 711 1255 +
ChrX	stalkie_big_nohaplotig	exon	92731269	92731369	100	+	.	Parent=Dv_FBgn0201266.3.mrna1;Target=Dv_FBgn0201266.3 1256 1356 +
ChrX	stalkie_big_nohaplotig	CDS	92730516	92730870	.	+	0	Parent=Dv_FBgn0201266.3.mrna1;Target=Dv_FBgn0201266.3 901 1255 +
ChrX	stalkie_big_nohaplotig	CDS	92731269	92731369	.	+	2	Parent=Dv_FBgn0201266.3.mrna1;Target=Dv_FBgn0201266.3 1256 1356 +
ChrX	stalkie_big_nohaplotig	mRNA	92730849	92731292	.	-	.	ID=comp158499_c0_seq1.mrna3;geneID=comp158499_c0_seq1.path3;Name=comp158499_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.4;matches=433;mismatches=10;indels=6;unknowns=0;Target=comp158499_c0_seq1 448 1 .;CDS_Target=comp158499_c0_seq1 53 3 .;locus=RLOC_00004889
ChrX	stalkie_big_nohaplotig	exon	92730849	92731292	96	-	.	Parent=comp158499_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	CDS	92731239	92731290	.	-	0	Parent=comp158499_c0_seq1.mrna3
ChrX	gffcl	locus	92762938	92763502	.	-	.	ID=RLOC_00004890;geneIDs=comp116119_c0_seq1.path2;transcripts=comp116119_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	92762938	92763502	.	-	.	ID=comp116119_c0_seq1.mrna2;geneID=comp116119_c0_seq1.path2;Name=comp116119_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=561;mismatches=4;indels=0;unknowns=0;Target=comp116119_c0_seq1 565 1 .;CDS_Target=comp116119_c0_seq1 391 338 .;locus=RLOC_00004890
ChrX	stalkie_big_nohaplotig	exon	92762938	92763502	99	-	.	Parent=comp116119_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	92763112	92763165	.	-	0	Parent=comp116119_c0_seq1.mrna2
ChrX	gffcl	locus	92763575	92763800	.	-	.	ID=RLOC_00004891;geneIDs=comp755918_c0_seq1.path2;transcripts=comp755918_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	92763575	92763800	.	-	.	ID=comp755918_c0_seq1.mrna2;geneID=comp755918_c0_seq1.path2;Name=comp755918_c0_seq1;Dir=indeterminatecoverage=97.0;identity=100.0;matches=226;mismatches=0;indels=0;unknowns=0;Target=comp755918_c0_seq1 233 8 .;CDS_Target=comp755918_c0_seq1 61 8 .;locus=RLOC_00004891
ChrX	stalkie_big_nohaplotig	exon	92763575	92763800	100	-	.	Parent=comp755918_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	92763747	92763800	.	-	0	Parent=comp755918_c0_seq1.mrna2
ChrX	gffcl	locus	92764389	92766493	.	-	.	ID=RLOC_00004892;geneIDs=FBgn0029137.1.path2;transcripts=FBgn0029137.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	92764389	92766493	.	-	.	ID=FBgn0029137.1.mrna2;geneID=FBgn0029137.1.path2;Name=FBgn0029137.1;Dir=sensecoverage=100.0;identity=100.0;matches=1824;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004892
ChrX	stalkie_big_nohaplotig	exon	92764389	92764577	100	-	.	Parent=FBgn0029137.1.mrna2;Target=FBgn0029137.1 1636 1824 +
ChrX	stalkie_big_nohaplotig	exon	92764646	92765137	100	-	.	Parent=FBgn0029137.1.mrna2;Target=FBgn0029137.1 1144 1635 +
ChrX	stalkie_big_nohaplotig	exon	92765194	92765603	100	-	.	Parent=FBgn0029137.1.mrna2;Target=FBgn0029137.1 734 1143 +
ChrX	stalkie_big_nohaplotig	exon	92765761	92766493	100	-	.	Parent=FBgn0029137.1.mrna2;Target=FBgn0029137.1 1 733 +
ChrX	stalkie_big_nohaplotig	CDS	92764389	92764577	.	-	0	Parent=FBgn0029137.1.mrna2;Target=FBgn0029137.1 1636 1824 +
ChrX	stalkie_big_nohaplotig	CDS	92764646	92765137	.	-	0	Parent=FBgn0029137.1.mrna2;Target=FBgn0029137.1 1144 1635 +
ChrX	stalkie_big_nohaplotig	CDS	92765194	92765603	.	-	2	Parent=FBgn0029137.1.mrna2;Target=FBgn0029137.1 734 1143 +
ChrX	stalkie_big_nohaplotig	CDS	92765761	92766493	.	-	0	Parent=FBgn0029137.1.mrna2;Target=FBgn0029137.1 1 733 +
ChrX	gffcl	locus	92816302	92826506	.	+	.	ID=RLOC_00004893;geneIDs=FBgn0010263.path1;transcripts=FBgn0010263.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92816302	92826506	.	+	.	ID=FBgn0010263.mrna1;geneID=FBgn0010263.path1;Name=FBgn0010263;Dir=sensecoverage=100.0;identity=99.7;matches=1134;mismatches=3;indels=0;unknowns=0;locus=RLOC_00004893
ChrX	stalkie_big_nohaplotig	exon	92816302	92816333	90	+	.	Parent=FBgn0010263.mrna1;Target=FBgn0010263 1 32 +
ChrX	stalkie_big_nohaplotig	exon	92817697	92817944	100	+	.	Parent=FBgn0010263.mrna1;Target=FBgn0010263 33 280 +
ChrX	stalkie_big_nohaplotig	exon	92823629	92823732	100	+	.	Parent=FBgn0010263.mrna1;Target=FBgn0010263 281 384 +
ChrX	stalkie_big_nohaplotig	exon	92823794	92823947	100	+	.	Parent=FBgn0010263.mrna1;Target=FBgn0010263 385 538 +
ChrX	stalkie_big_nohaplotig	exon	92824050	92824317	100	+	.	Parent=FBgn0010263.mrna1;Target=FBgn0010263 539 806 +
ChrX	stalkie_big_nohaplotig	exon	92826099	92826273	100	+	.	Parent=FBgn0010263.mrna1;Target=FBgn0010263 807 981 +
ChrX	stalkie_big_nohaplotig	exon	92826351	92826506	100	+	.	Parent=FBgn0010263.mrna1;Target=FBgn0010263 982 1137 +
ChrX	stalkie_big_nohaplotig	CDS	92816302	92816333	.	+	0	Parent=FBgn0010263.mrna1;Target=FBgn0010263 1 32 +
ChrX	stalkie_big_nohaplotig	CDS	92817697	92817944	.	+	1	Parent=FBgn0010263.mrna1;Target=FBgn0010263 33 280 +
ChrX	stalkie_big_nohaplotig	CDS	92823629	92823732	.	+	2	Parent=FBgn0010263.mrna1;Target=FBgn0010263 281 384 +
ChrX	stalkie_big_nohaplotig	CDS	92823794	92823947	.	+	0	Parent=FBgn0010263.mrna1;Target=FBgn0010263 385 538 +
ChrX	stalkie_big_nohaplotig	CDS	92824050	92824317	.	+	2	Parent=FBgn0010263.mrna1;Target=FBgn0010263 539 806 +
ChrX	stalkie_big_nohaplotig	CDS	92826099	92826273	.	+	1	Parent=FBgn0010263.mrna1;Target=FBgn0010263 807 981 +
ChrX	stalkie_big_nohaplotig	CDS	92826351	92826506	.	+	0	Parent=FBgn0010263.mrna1;Target=FBgn0010263 982 1137 +
ChrX	gffcl	locus	92827873	92829072	.	-	.	ID=RLOC_00004894;geneIDs=comp153337_c0_seq1.path1;transcripts=comp153337_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92827873	92829072	.	-	.	ID=comp153337_c0_seq1.mrna1;geneID=comp153337_c0_seq1.path1;Name=comp153337_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.8;matches=1195;mismatches=5;indels=9;unknowns=0;Target=comp153337_c0_seq1 1209 1 .;CDS_Target=comp153337_c0_seq1 1029 901 .;locus=RLOC_00004894
ChrX	stalkie_big_nohaplotig	exon	92827873	92829072	98	-	.	Parent=comp153337_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	92828053	92828181	.	-	0	Parent=comp153337_c0_seq1.mrna1
ChrX	gffcl	locus	92829119	92830434	.	-	.	ID=RLOC_00004895;geneIDs=comp156919_c1_seq1.path1;transcripts=comp156919_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92829119	92830434	.	-	.	ID=comp156919_c1_seq1.mrna1;geneID=comp156919_c1_seq1.path1;Name=comp156919_c1_seq1;Dir=indeterminatecoverage=53.4;identity=98.6;matches=1306;mismatches=2;indels=16;unknowns=0;Target=comp156919_c1_seq1 1316 1 .;CDS_Target=comp156919_c1_seq1 103 2 .;locus=RLOC_00004895
ChrX	stalkie_big_nohaplotig	exon	92829119	92830434	98	-	.	Parent=comp156919_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	92830332	92830433	.	-	0	Parent=comp156919_c1_seq1.mrna1
ChrX	gffcl	locus	92830978	92831223	.	-	.	ID=RLOC_00004896;geneIDs=comp819016_c0_seq1.path1;transcripts=comp819016_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92830978	92831223	.	-	.	ID=comp819016_c0_seq1.mrna1;geneID=comp819016_c0_seq1.path1;Name=comp819016_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=246;mismatches=0;indels=0;unknowns=0;Target=comp819016_c0_seq1 246 1 .;CDS_Target=comp819016_c0_seq1 194 3 .;locus=RLOC_00004896
ChrX	stalkie_big_nohaplotig	exon	92830978	92831223	100	-	.	Parent=comp819016_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	92831030	92831221	.	-	0	Parent=comp819016_c0_seq1.mrna1
ChrX	gffcl	locus	92837867	92838599	.	+	.	ID=RLOC_00004897;geneIDs=comp147793_c0_seq1.path1;transcripts=comp147793_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92837867	92838599	.	+	.	ID=comp147793_c0_seq1.mrna1;geneID=comp147793_c0_seq1.path1;Name=comp147793_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=732;mismatches=1;indels=0;unknowns=0;Target=comp147793_c0_seq1 733 1 .;CDS_Target=comp147793_c0_seq1 307 134 .;locus=RLOC_00004897
ChrX	stalkie_big_nohaplotig	exon	92837867	92838599	99	+	.	Parent=comp147793_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	92838000	92838173	.	+	0	Parent=comp147793_c0_seq1.mrna1
ChrX	gffcl	locus	92839029	92839798	.	-	.	ID=RLOC_00004898;geneIDs=comp116514_c0_seq1.path1;transcripts=comp116514_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92839029	92839798	.	-	.	ID=comp116514_c0_seq1.mrna1;geneID=comp116514_c0_seq1.path1;Name=comp116514_c0_seq1;Dir=indeterminatecoverage=97.7;identity=100.0;matches=770;mismatches=0;indels=0;unknowns=0;Target=comp116514_c0_seq1 788 19 .;CDS_Target=comp116514_c0_seq1 162 19 .;locus=RLOC_00004898
ChrX	stalkie_big_nohaplotig	exon	92839029	92839798	100	-	.	Parent=comp116514_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	92839655	92839798	.	-	0	Parent=comp116514_c0_seq1.mrna1
ChrX	gffcl	locus	92839809	92840880	.	-	.	ID=RLOC_00004899;geneIDs=comp154664_c0_seq1.path1;transcripts=comp154664_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92839809	92840880	.	-	.	ID=comp154664_c0_seq1.mrna1;geneID=comp154664_c0_seq1.path1;Name=comp154664_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.9;matches=1071;mismatches=1;indels=0;unknowns=0;Target=comp154664_c0_seq1 1072 1 .;CDS_Target=comp154664_c0_seq1 719 612 .;locus=RLOC_00004899
ChrX	stalkie_big_nohaplotig	exon	92839809	92840880	99	-	.	Parent=comp154664_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	92840162	92840269	.	-	0	Parent=comp154664_c0_seq1.mrna1
ChrX	gffcl	locus	92845063	92846195	.	-	.	ID=RLOC_00004900;geneIDs=comp151096_c0_seq1.path1;transcripts=comp151096_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92845063	92846195	.	-	.	ID=comp151096_c0_seq1.mrna1;geneID=comp151096_c0_seq1.path1;Name=comp151096_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=1133;mismatches=0;indels=0;unknowns=0;Target=comp151096_c0_seq1 1134 2 .;CDS_Target=comp151096_c0_seq1 531 448 .;locus=RLOC_00004900
ChrX	stalkie_big_nohaplotig	exon	92845063	92846195	100	-	.	Parent=comp151096_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	92845666	92845749	.	-	0	Parent=comp151096_c0_seq1.mrna1
ChrX	gffcl	locus	92846376	92847197	.	-	.	ID=RLOC_00004901;geneIDs=comp133745_c0_seq1.path1;transcripts=comp133745_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92846376	92847197	.	-	.	ID=comp133745_c0_seq1.mrna1;geneID=comp133745_c0_seq1.path1;Name=comp133745_c0_seq1;Dir=indeterminatecoverage=91.9;identity=99.3;matches=816;mismatches=3;indels=3;unknowns=0;Target=comp133745_c0_seq1 819 1 .;CDS_Target=comp133745_c0_seq1 801 682 .;locus=RLOC_00004901
ChrX	stalkie_big_nohaplotig	exon	92846376	92847197	99	-	.	Parent=comp133745_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	92846397	92846516	.	-	0	Parent=comp133745_c0_seq1.mrna1
ChrX	gffcl	locus	92857626	92861331	.	+	.	ID=RLOC_00004902;geneIDs=comp120402_c0_seq1.path2;transcripts=comp120402_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	92857626	92861331	.	+	.	ID=comp120402_c0_seq1.mrna2;geneID=comp120402_c0_seq1.path2;Name=comp120402_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=1129;mismatches=2;indels=0;unknowns=0;locus=RLOC_00004902
ChrX	stalkie_big_nohaplotig	exon	92857626	92857876	100	+	.	Parent=comp120402_c0_seq1.mrna2;Target=comp120402_c0_seq1 881 1131 -
ChrX	stalkie_big_nohaplotig	exon	92857950	92858449	99	+	.	Parent=comp120402_c0_seq1.mrna2;Target=comp120402_c0_seq1 381 880 -
ChrX	stalkie_big_nohaplotig	exon	92860952	92861331	99	+	.	Parent=comp120402_c0_seq1.mrna2;Target=comp120402_c0_seq1 1 380 -
ChrX	stalkie_big_nohaplotig	CDS	92857838	92857876	.	+	0	Parent=comp120402_c0_seq1.mrna2;Target=comp120402_c0_seq1 881 919 .
ChrX	stalkie_big_nohaplotig	CDS	92857950	92858297	.	+	0	Parent=comp120402_c0_seq1.mrna2;Target=comp120402_c0_seq1 533 880 .
ChrX	gffcl	locus	92875970	92876046	.	+	.	ID=RLOC_00004903;geneIDs=comp162573_c0_seq1.path1;transcripts=comp162573_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92875970	92876046	.	+	.	ID=comp162573_c0_seq1.mrna1;geneID=comp162573_c0_seq1.path1;Name=comp162573_c0_seq1;Dir=indeterminatecoverage=11.7;identity=88.3;matches=68;mismatches=9;indels=0;unknowns=0;Target=comp162573_c0_seq1 77 1 .;locus=RLOC_00004903
ChrX	stalkie_big_nohaplotig	exon	92875970	92876046	88	+	.	Parent=comp162573_c0_seq1.mrna1
ChrX	gffcl	locus	92894439	92895734	.	-	.	ID=RLOC_00004904;geneIDs=ORF1190.path1;transcripts=ORF1190.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92894439	92895734	.	-	.	ID=ORF1190.mrna1;geneID=ORF1190.path1;Name=ORF1190;Dir=sensecoverage=94.9;identity=99.9;matches=1132;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004904
ChrX	stalkie_big_nohaplotig	exon	92894439	92895188	100	-	.	Parent=ORF1190.mrna1;Target=ORF1190 445 1194 +
ChrX	stalkie_big_nohaplotig	exon	92895264	92895452	100	-	.	Parent=ORF1190.mrna1;Target=ORF1190 256 444 +
ChrX	stalkie_big_nohaplotig	exon	92895541	92895734	99	-	.	Parent=ORF1190.mrna1;Target=ORF1190 62 255 +
ChrX	stalkie_big_nohaplotig	CDS	92894439	92895188	.	-	0	Parent=ORF1190.mrna1;Target=ORF1190 445 1194 +
ChrX	stalkie_big_nohaplotig	CDS	92895264	92895452	.	-	0	Parent=ORF1190.mrna1;Target=ORF1190 256 444 +
ChrX	stalkie_big_nohaplotig	CDS	92895541	92895732	.	-	0	Parent=ORF1190.mrna1;Target=ORF1190 64 255 +
ChrX	gffcl	locus	92902399	92909589	.	-	.	ID=RLOC_00004905;geneIDs=comp135273_c0_seq1.path1;transcripts=comp135273_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92902399	92909589	.	-	.	ID=comp135273_c0_seq1.mrna1;geneID=comp135273_c0_seq1.path1;Name=comp135273_c0_seq1;Dir=antisensecoverage=99.3;identity=99.7;matches=1110;mismatches=3;indels=0;unknowns=0;locus=RLOC_00004905
ChrX	stalkie_big_nohaplotig	exon	92902399	92902675	100	-	.	Parent=comp135273_c0_seq1.mrna1;Target=comp135273_c0_seq1 1 277 -
ChrX	stalkie_big_nohaplotig	exon	92908434	92908873	99	-	.	Parent=comp135273_c0_seq1.mrna1;Target=comp135273_c0_seq1 278 717 -
ChrX	stalkie_big_nohaplotig	exon	92909102	92909263	100	-	.	Parent=comp135273_c0_seq1.mrna1;Target=comp135273_c0_seq1 718 879 -
ChrX	stalkie_big_nohaplotig	exon	92909356	92909589	99	-	.	Parent=comp135273_c0_seq1.mrna1;Target=comp135273_c0_seq1 880 1113 -
ChrX	stalkie_big_nohaplotig	CDS	92908562	92908873	.	-	0	Parent=comp135273_c0_seq1.mrna1;Target=comp135273_c0_seq1 406 717 .
ChrX	stalkie_big_nohaplotig	CDS	92909102	92909263	.	-	0	Parent=comp135273_c0_seq1.mrna1;Target=comp135273_c0_seq1 718 879 .
ChrX	stalkie_big_nohaplotig	CDS	92909356	92909415	.	-	0	Parent=comp135273_c0_seq1.mrna1;Target=comp135273_c0_seq1 880 939 .
ChrX	gffcl	locus	92952171	92953013	.	-	.	ID=RLOC_00004906;geneIDs=comp157873_c1_seq1.path1;transcripts=comp157873_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92952171	92953013	.	-	.	ID=comp157873_c1_seq1.mrna1;geneID=comp157873_c1_seq1.path1;Name=comp157873_c1_seq1;Dir=antisensecoverage=57.4;identity=99.5;matches=731;mismatches=4;indels=0;unknowns=0;locus=RLOC_00004906
ChrX	stalkie_big_nohaplotig	exon	92952171	92952731	99	-	.	Parent=comp157873_c1_seq1.mrna1;Target=comp157873_c1_seq1 1 561 -
ChrX	stalkie_big_nohaplotig	exon	92952840	92953013	100	-	.	Parent=comp157873_c1_seq1.mrna1;Target=comp157873_c1_seq1 562 735 -
ChrX	gffcl	locus	92956859	92959601	.	-	.	ID=RLOC_00004907;geneIDs=comp66452_c0_seq1.path1,comp159979_c0_seq1.path1;transcripts=comp159979_c0_seq1.mrna1,comp66452_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92956859	92959601	.	-	.	ID=comp159979_c0_seq1.mrna1;geneID=comp159979_c0_seq1.path1;Name=comp159979_c0_seq1;Dir=antisensecoverage=90.0;identity=97.5;matches=2112;mismatches=55;indels=0;unknowns=0;Target=comp159979_c0_seq1 845 1516 .;locus=RLOC_00004907
ChrX	stalkie_big_nohaplotig	exon	92956859	92958617	98	-	.	Parent=comp159979_c0_seq1.mrna1;Target=comp159979_c0_seq1 242 2000 -
ChrX	stalkie_big_nohaplotig	exon	92959022	92959215	86	-	.	Parent=comp159979_c0_seq1.mrna1;Target=comp159979_c0_seq1 2001 2194 -
ChrX	stalkie_big_nohaplotig	exon	92959388	92959601	97	-	.	Parent=comp159979_c0_seq1.mrna1;Target=comp159979_c0_seq1 2195 2408 -
ChrX	stalkie_big_nohaplotig	CDS	92957462	92958133	.	-	0	Parent=comp159979_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	92958699	92959043	.	-	.	ID=comp66452_c0_seq1.mrna1;geneID=comp66452_c0_seq1.path1;Name=comp66452_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=242;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004907
ChrX	stalkie_big_nohaplotig	exon	92958699	92958919	99	-	.	Parent=comp66452_c0_seq1.mrna1;Target=comp66452_c0_seq1 23 243 +
ChrX	stalkie_big_nohaplotig	exon	92959022	92959043	100	-	.	Parent=comp66452_c0_seq1.mrna1;Target=comp66452_c0_seq1 1 22 +
ChrX	stalkie_big_nohaplotig	CDS	92958895	92958919	.	-	1	Parent=comp66452_c0_seq1.mrna1;Target=comp66452_c0_seq1 23 47 +
ChrX	stalkie_big_nohaplotig	CDS	92959022	92959041	.	-	0	Parent=comp66452_c0_seq1.mrna1;Target=comp66452_c0_seq1 3 22 +
ChrX	gffcl	locus	93070380	93070711	.	+	.	ID=RLOC_00004908;geneIDs=comp162442_c1_seq1.path3;transcripts=comp162442_c1_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	93070380	93070711	.	+	.	ID=comp162442_c1_seq1.mrna3;geneID=comp162442_c1_seq1.path3;Name=comp162442_c1_seq1;Dir=indeterminatecoverage=100.0;identity=92.2;matches=306;mismatches=11;indels=15;unknowns=0;Target=comp162442_c1_seq1 317 1 .;CDS_Target=comp162442_c1_seq1 12 1 .;locus=RLOC_00004908
ChrX	stalkie_big_nohaplotig	exon	93070380	93070711	92	+	.	Parent=comp162442_c1_seq1.mrna3
ChrX	stalkie_big_nohaplotig	CDS	93070380	93070391	.	+	0	Parent=comp162442_c1_seq1.mrna3
ChrX	gffcl	locus	93075993	93076117	.	+	.	ID=RLOC_00004909;geneIDs=FBgn0028433.1.path1;transcripts=FBgn0028433.1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	93075993	93076117	.	+	.	ID=FBgn0028433.1.mrna1;geneID=FBgn0028433.1.path1;Name=FBgn0028433.1;Dir=indeterminatecoverage=54.8;identity=100.0;matches=125;mismatches=0;indels=0;unknowns=0;Target=FBgn0028433.1 125 1 .;locus=RLOC_00004909
ChrX	stalkie_big_nohaplotig	exon	93075993	93076117	100	+	.	Parent=FBgn0028433.1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	93075993	93076117	.	+	0	Parent=FBgn0028433.1.mrna1
ChrX	gffcl	locus	93305859	93308912	.	-	.	ID=RLOC_00004911;geneIDs=ORF101.path1;transcripts=ORF101.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	93305859	93308912	.	-	.	ID=ORF101.mrna1;geneID=ORF101.path1;Name=ORF101;Dir=indeterminatecoverage=100.0;identity=99.8;matches=3049;mismatches=5;indels=0;unknowns=0;Target=ORF101 3054 1 .;locus=RLOC_00004911
ChrX	stalkie_big_nohaplotig	exon	93305859	93308912	99	-	.	Parent=ORF101.mrna1
ChrX	stalkie_big_nohaplotig	CDS	93305859	93308912	.	-	0	Parent=ORF101.mrna1
ChrX	gffcl	locus	93370981	93653002	.	.	.	ID=RLOC_00004912;geneIDs=comp150095_c0_seq1.path1,comp161941_c0_seq1.path1;transcripts=comp161941_c0_seq1.mrna1,comp150095_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	93370981	93653002	.	-	.	ID=comp161941_c0_seq1.mrna1;geneID=comp161941_c0_seq1.path1;Name=comp161941_c0_seq1;Dir=indeterminatecoverage=93.3;identity=96.2;matches=1362;mismatches=41;indels=13;unknowns=100;Target=comp161941_c0_seq1 1109 1089 .;locus=RLOC_00004912
ChrX	stalkie_big_nohaplotig	exon	93370981	93371151	94	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 2047 1877 .
ChrX	stalkie_big_nohaplotig	exon	93372886	93372888	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1876 1874 .
ChrX	stalkie_big_nohaplotig	exon	93373034	93373044	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1873 1863 .
ChrX	stalkie_big_nohaplotig	exon	93375043	93375048	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1862 1857 .
ChrX	stalkie_big_nohaplotig	exon	93378889	93378891	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1856 1854 .
ChrX	stalkie_big_nohaplotig	exon	93394422	93394432	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1677 1667 .
ChrX	stalkie_big_nohaplotig	exon	93399977	93399982	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1666 1661 .
ChrX	stalkie_big_nohaplotig	exon	93407424	93407433	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1654 1645 .
ChrX	stalkie_big_nohaplotig	exon	93409956	93409962	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1644 1638 .
ChrX	stalkie_big_nohaplotig	exon	93420011	93420021	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1633 1623 .
ChrX	stalkie_big_nohaplotig	exon	93425310	93425316	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1622 1616 .
ChrX	stalkie_big_nohaplotig	exon	93432627	93432630	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1615 1612 .
ChrX	stalkie_big_nohaplotig	exon	93482233	93482243	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1607 1597 .
ChrX	stalkie_big_nohaplotig	exon	93537574	93537586	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1566 1554 .
ChrX	stalkie_big_nohaplotig	exon	93539076	93539081	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1553 1548 .
ChrX	stalkie_big_nohaplotig	exon	93543055	93543057	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1547 1545 .
ChrX	stalkie_big_nohaplotig	exon	93543089	93543098	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1498 1489 .
ChrX	stalkie_big_nohaplotig	exon	93546940	93546941	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1488 1487 .
ChrX	stalkie_big_nohaplotig	exon	93546962	93546969	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1462 1455 .
ChrX	stalkie_big_nohaplotig	exon	93552673	93552681	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1449 1441 .
ChrX	stalkie_big_nohaplotig	exon	93552952	93552959	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1440 1433 .
ChrX	stalkie_big_nohaplotig	exon	93560424	93560432	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1425 1417 .
ChrX	stalkie_big_nohaplotig	exon	93560456	93560463	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1380 1373 .
ChrX	stalkie_big_nohaplotig	exon	93560490	93560497	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1326 1319 .
ChrX	stalkie_big_nohaplotig	exon	93569766	93569773	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1314 1307 .
ChrX	stalkie_big_nohaplotig	exon	93569797	93569804	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1250 1243 .
ChrX	stalkie_big_nohaplotig	exon	93573093	93573094	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1242 1241 .
ChrX	stalkie_big_nohaplotig	exon	93588778	93588784	100	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1240 1234 .
ChrX	stalkie_big_nohaplotig	exon	93589932	93590244	93	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 1226 926 .
ChrX	stalkie_big_nohaplotig	exon	93623475	93623843	98	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 925 556 .
ChrX	stalkie_big_nohaplotig	exon	93652544	93653002	95	-	.	Parent=comp161941_c0_seq1.mrna1;Target=comp161941_c0_seq1 555 97 .
ChrX	stalkie_big_nohaplotig	CDS	93590061	93590081	.	-	0	Parent=comp161941_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	93572655	93573361	.	+	.	ID=comp150095_c0_seq1.mrna1;geneID=comp150095_c0_seq1.path1;Name=comp150095_c0_seq1;Dir=indeterminatecoverage=97.0;identity=99.9;matches=706;mismatches=1;indels=0;unknowns=0;Target=comp150095_c0_seq1 708 2 .;CDS_Target=comp150095_c0_seq1 154 35 .;locus=RLOC_00004912
ChrX	stalkie_big_nohaplotig	exon	93572655	93573361	99	+	.	Parent=comp150095_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	93572688	93572807	.	+	0	Parent=comp150095_c0_seq1.mrna1
ChrX	gffcl	locus	93559708	93560005	.	-	.	ID=RLOC_00004914;geneIDs=comp318956_c0_seq1.path1;transcripts=comp318956_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	93559708	93560005	.	-	.	ID=comp318956_c0_seq1.mrna1;geneID=comp318956_c0_seq1.path1;Name=comp318956_c0_seq1;Dir=indeterminatecoverage=94.6;identity=97.7;matches=291;mismatches=7;indels=0;unknowns=0;Target=comp318956_c0_seq1 315 18 .;CDS_Target=comp318956_c0_seq1 125 18 .;locus=RLOC_00004914
ChrX	stalkie_big_nohaplotig	exon	93559708	93560005	97	-	.	Parent=comp318956_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	93559898	93560005	.	-	0	Parent=comp318956_c0_seq1.mrna1
ChrX	gffcl	locus	93561525	93562107	.	-	.	ID=RLOC_00004915;geneIDs=comp140258_c0_seq1.path1;transcripts=comp140258_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	93561525	93562107	.	-	.	ID=comp140258_c0_seq1.mrna1;geneID=comp140258_c0_seq1.path1;Name=comp140258_c0_seq1;Dir=indeterminatecoverage=96.2;identity=98.8;matches=576;mismatches=7;indels=0;unknowns=0;Target=comp140258_c0_seq1 606 24 .;CDS_Target=comp140258_c0_seq1 593 492 .;locus=RLOC_00004915
ChrX	stalkie_big_nohaplotig	exon	93561525	93562107	98	-	.	Parent=comp140258_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	93561538	93561639	.	-	0	Parent=comp140258_c0_seq1.mrna1
ChrX	gffcl	locus	93562606	93565761	.	+	.	ID=RLOC_00004916;geneIDs=comp147791_c0_seq1.path1;transcripts=comp147791_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	93562606	93565761	.	+	.	ID=comp147791_c0_seq1.mrna1;geneID=comp147791_c0_seq1.path1;Name=comp147791_c0_seq1;Dir=indeterminatecoverage=84.5;identity=98.0;matches=1897;mismatches=3;indels=36;unknowns=0;locus=RLOC_00004916
ChrX	stalkie_big_nohaplotig	exon	93562606	93562615	90	+	.	Parent=comp147791_c0_seq1.mrna1;Target=comp147791_c0_seq1 359 350 .
ChrX	stalkie_big_nohaplotig	exon	93562692	93562702	81	+	.	Parent=comp147791_c0_seq1.mrna1;Target=comp147791_c0_seq1 370 360 .
ChrX	stalkie_big_nohaplotig	exon	93563847	93565761	98	+	.	Parent=comp147791_c0_seq1.mrna1;Target=comp147791_c0_seq1 2249 371 .
ChrX	stalkie_big_nohaplotig	CDS	93562608	93562615	.	+	0	Parent=comp147791_c0_seq1.mrna1;Target=comp147791_c0_seq1 359 352 .
ChrX	stalkie_big_nohaplotig	CDS	93562692	93562702	.	+	1	Parent=comp147791_c0_seq1.mrna1;Target=comp147791_c0_seq1 370 360 .
ChrX	stalkie_big_nohaplotig	CDS	93563847	93563974	.	+	2	Parent=comp147791_c0_seq1.mrna1;Target=comp147791_c0_seq1 462 371 .
ChrX	gffcl	locus	93565763	93566606	.	+	.	ID=RLOC_00004917;geneIDs=comp206281_c0_seq1.path1;transcripts=comp206281_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	93565763	93566606	.	+	.	ID=comp206281_c0_seq1.mrna1;geneID=comp206281_c0_seq1.path1;Name=comp206281_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=842;mismatches=2;indels=0;unknowns=0;Target=comp206281_c0_seq1 844 1 .;CDS_Target=comp206281_c0_seq1 615 454 .;locus=RLOC_00004917
ChrX	stalkie_big_nohaplotig	exon	93565763	93566606	99	+	.	Parent=comp206281_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	93566216	93566377	.	+	0	Parent=comp206281_c0_seq1.mrna1
ChrX	gffcl	locus	93570361	93570868	.	-	.	ID=RLOC_00004918;geneIDs=comp537093_c0_seq1.path1;transcripts=comp537093_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	93570361	93570868	.	-	.	ID=comp537093_c0_seq1.mrna1;geneID=comp537093_c0_seq1.path1;Name=comp537093_c0_seq1;Dir=indeterminatecoverage=99.0;identity=100.0;matches=508;mismatches=0;indels=0;unknowns=0;Target=comp537093_c0_seq1 513 6 .;CDS_Target=comp537093_c0_seq1 120 7 .;locus=RLOC_00004918
ChrX	stalkie_big_nohaplotig	exon	93570361	93570868	100	-	.	Parent=comp537093_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	93570754	93570867	.	-	0	Parent=comp537093_c0_seq1.mrna1
ChrX	gffcl	locus	93571686	93572159	.	+	.	ID=RLOC_00004919;geneIDs=comp61403_c0_seq1.path1;transcripts=comp61403_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	93571686	93572159	.	+	.	ID=comp61403_c0_seq1.mrna1;geneID=comp61403_c0_seq1.path1;Name=comp61403_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=474;mismatches=0;indels=0;unknowns=0;Target=comp61403_c0_seq1 474 1 .;CDS_Target=comp61403_c0_seq1 92 3 .;locus=RLOC_00004919
ChrX	stalkie_big_nohaplotig	exon	93571686	93572159	100	+	.	Parent=comp61403_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	93571688	93571777	.	+	0	Parent=comp61403_c0_seq1.mrna1
ChrX	gffcl	locus	93574807	93574909	.	-	.	ID=RLOC_00004920;geneIDs=FBgn0028433.1.path2;transcripts=FBgn0028433.1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	93574807	93574909	.	-	.	ID=FBgn0028433.1.mrna2;geneID=FBgn0028433.1.path2;Name=FBgn0028433.1;Dir=indeterminatecoverage=45.2;identity=100.0;matches=103;mismatches=0;indels=0;unknowns=0;Target=FBgn0028433.1 228 126 .;locus=RLOC_00004920
ChrX	stalkie_big_nohaplotig	exon	93574807	93574909	100	-	.	Parent=FBgn0028433.1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	93574807	93574909	.	-	2	Parent=FBgn0028433.1.mrna2
ChrX	gffcl	locus	93631218	93631881	.	+	.	ID=RLOC_00004921;geneIDs=comp148988_c0_seq1.path3;transcripts=comp148988_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	93631218	93631881	.	+	.	ID=comp148988_c0_seq1.mrna3;geneID=comp148988_c0_seq1.path3;Name=comp148988_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=656;mismatches=8;indels=10;unknowns=0;Target=comp148988_c0_seq1 674 1 .;CDS_Target=comp148988_c0_seq1 313 200 .;locus=RLOC_00004921
ChrX	stalkie_big_nohaplotig	exon	93631218	93631881	97	+	.	Parent=comp148988_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	CDS	93631417	93631530	.	+	0	Parent=comp148988_c0_seq1.mrna3
ChrX	gffcl	locus	93660468	93661290	.	+	.	ID=RLOC_00004922;geneIDs=FBgn0052271.3.path1;transcripts=FBgn0052271.3.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	93660468	93661290	.	+	.	ID=FBgn0052271.3.mrna1;geneID=FBgn0052271.3.path1;Name=FBgn0052271.3;Dir=indeterminatecoverage=99.8;identity=99.4;matches=818;mismatches=5;indels=0;unknowns=0;Target=FBgn0052271.3 825 3 .;CDS_Target=FBgn0052271.3 825 49 .;locus=RLOC_00004922
ChrX	stalkie_big_nohaplotig	exon	93660468	93661290	99	+	.	Parent=FBgn0052271.3.mrna1
ChrX	stalkie_big_nohaplotig	CDS	93660514	93661290	.	+	0	Parent=FBgn0052271.3.mrna1
ChrX	gffcl	locus	93679807	93681703	.	-	.	ID=RLOC_00004923;geneIDs=comp152853_c0_seq1.path1;transcripts=comp152853_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	93679807	93681703	.	-	.	ID=comp152853_c0_seq1.mrna1;geneID=comp152853_c0_seq1.path1;Name=comp152853_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1896;mismatches=1;indels=0;unknowns=0;Target=comp152853_c0_seq1 1897 1 .;CDS_Target=comp152853_c0_seq1 1833 1723 .;locus=RLOC_00004923
ChrX	stalkie_big_nohaplotig	exon	93679807	93681703	99	-	.	Parent=comp152853_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	93679871	93679981	.	-	0	Parent=comp152853_c0_seq1.mrna1
ChrX	gffcl	locus	93695535	93696549	.	-	.	ID=RLOC_00004924;geneIDs=comp110077_c0_seq1.path1;transcripts=comp110077_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	93695535	93696549	.	-	.	ID=comp110077_c0_seq1.mrna1;geneID=comp110077_c0_seq1.path1;Name=comp110077_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.8;matches=1013;mismatches=2;indels=0;unknowns=0;Target=comp110077_c0_seq1 1015 1 .;CDS_Target=comp110077_c0_seq1 501 385 .;locus=RLOC_00004924
ChrX	stalkie_big_nohaplotig	exon	93695535	93696549	99	-	.	Parent=comp110077_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	93696049	93696165	.	-	0	Parent=comp110077_c0_seq1.mrna1
ChrX	gffcl	locus	93697685	93698587	.	+	.	ID=RLOC_00004925;geneIDs=comp116556_c0_seq1.path1;transcripts=comp116556_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	93697685	93698587	.	+	.	ID=comp116556_c0_seq1.mrna1;geneID=comp116556_c0_seq1.path1;Name=comp116556_c0_seq1;Dir=indeterminatecoverage=98.0;identity=99.8;matches=902;mismatches=1;indels=1;unknowns=0;Target=comp116556_c0_seq1 922 19 .;CDS_Target=comp116556_c0_seq1 907 557 .;locus=RLOC_00004925
ChrX	stalkie_big_nohaplotig	exon	93697685	93698587	99	+	.	Parent=comp116556_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	93698222	93698572	.	+	0	Parent=comp116556_c0_seq1.mrna1
ChrX	gffcl	locus	93698666	93699233	.	-	.	ID=RLOC_00004926;geneIDs=comp143373_c0_seq1.path1;transcripts=comp143373_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	93698666	93699233	.	-	.	ID=comp143373_c0_seq1.mrna1;geneID=comp143373_c0_seq1.path1;Name=comp143373_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=567;mismatches=1;indels=0;unknowns=0;Target=comp143373_c0_seq1 568 1 .;CDS_Target=comp143373_c0_seq1 58 2 .;locus=RLOC_00004926
ChrX	stalkie_big_nohaplotig	exon	93698666	93699233	99	-	.	Parent=comp143373_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	93699176	93699232	.	-	0	Parent=comp143373_c0_seq1.mrna1
ChrX	gffcl	locus	93719629	94331433	.	.	.	ID=RLOC_00004927;geneIDs=comp151773_c0_seq1.path1,comp161870_c0_seq1.path2,comp162620_c2_seq1.path1;transcripts=comp162620_c2_seq1.mrna1,comp151773_c0_seq1.mrna1,comp161870_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	93719629	93765516	.	-	.	ID=comp162620_c2_seq1.mrna1;geneID=comp162620_c2_seq1.path1;Name=comp162620_c2_seq1;Dir=sensecoverage=22.1;identity=100.0;matches=2522;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004927
ChrX	stalkie_big_nohaplotig	exon	93719629	93720905	100	-	.	Parent=comp162620_c2_seq1.mrna1;Target=comp162620_c2_seq1 1246 2522 +
ChrX	stalkie_big_nohaplotig	exon	93720970	93721873	100	-	.	Parent=comp162620_c2_seq1.mrna1;Target=comp162620_c2_seq1 342 1245 +
ChrX	stalkie_big_nohaplotig	exon	93762018	93762179	100	-	.	Parent=comp162620_c2_seq1.mrna1;Target=comp162620_c2_seq1 180 341 +
ChrX	stalkie_big_nohaplotig	exon	93765338	93765516	100	-	.	Parent=comp162620_c2_seq1.mrna1;Target=comp162620_c2_seq1 1 179 +
ChrX	stalkie_big_nohaplotig	CDS	93719629	93720905	.	-	2	Parent=comp162620_c2_seq1.mrna1;Target=comp162620_c2_seq1 1246 2522 +
ChrX	stalkie_big_nohaplotig	CDS	93720970	93721873	.	-	0	Parent=comp162620_c2_seq1.mrna1;Target=comp162620_c2_seq1 342 1245 +
ChrX	stalkie_big_nohaplotig	CDS	93762018	93762179	.	-	0	Parent=comp162620_c2_seq1.mrna1;Target=comp162620_c2_seq1 180 341 +
ChrX	stalkie_big_nohaplotig	CDS	93765338	93765514	.	-	0	Parent=comp162620_c2_seq1.mrna1;Target=comp162620_c2_seq1 3 179 +
ChrX	stalkie_big_nohaplotig	mRNA	93765511	94331433	.	-	.	ID=comp151773_c0_seq1.mrna1;geneID=comp151773_c0_seq1.path1;Name=comp151773_c0_seq1;Dir=antisensecoverage=100.0;identity=92.5;matches=936;mismatches=16;indels=60;unknowns=0;locus=RLOC_00004927
ChrX	stalkie_big_nohaplotig	exon	93765511	93766088	100	-	.	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 1 578 -
ChrX	stalkie_big_nohaplotig	exon	93774251	93774259	66	-	.	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 579 587 -
ChrX	stalkie_big_nohaplotig	exon	93782211	93782220	90	-	.	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 588 597 -
ChrX	stalkie_big_nohaplotig	exon	93811941	93811942	100	-	.	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 598 599 -
ChrX	stalkie_big_nohaplotig	exon	93840067	93840075	13	-	.	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 600 664 -
ChrX	stalkie_big_nohaplotig	exon	93844929	93844936	100	-	.	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 665 672 -
ChrX	stalkie_big_nohaplotig	exon	93858898	93858903	100	-	.	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 690 695 -
ChrX	stalkie_big_nohaplotig	exon	93861753	93861759	100	-	.	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 696 702 -
ChrX	stalkie_big_nohaplotig	exon	93869551	93869555	100	-	.	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 703 707 -
ChrX	stalkie_big_nohaplotig	exon	93873987	93873988	100	-	.	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 708 709 -
ChrX	stalkie_big_nohaplotig	exon	93876701	93876703	100	-	.	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 710 712 -
ChrX	stalkie_big_nohaplotig	exon	93883295	93883301	100	-	.	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 713 719 -
ChrX	stalkie_big_nohaplotig	exon	93889357	93889358	100	-	.	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 720 721 -
ChrX	stalkie_big_nohaplotig	exon	93900099	93900143	66	-	.	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 722 768 -
ChrX	stalkie_big_nohaplotig	exon	94320004	94320009	100	-	.	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 769 774 -
ChrX	stalkie_big_nohaplotig	exon	94322844	94322852	100	-	.	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 775 783 -
ChrX	stalkie_big_nohaplotig	exon	94322854	94322857	100	-	.	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 793 796 -
ChrX	stalkie_big_nohaplotig	exon	94323763	94323766	100	-	.	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 797 800 -
ChrX	stalkie_big_nohaplotig	exon	94331198	94331433	100	-	.	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 801 1036 -
ChrX	stalkie_big_nohaplotig	CDS	93765512	93766088	.	-	1	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 2 578 .
ChrX	stalkie_big_nohaplotig	CDS	93774251	93774259	.	-	1	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 579 587 .
ChrX	stalkie_big_nohaplotig	CDS	93782211	93782220	.	-	2	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 588 597 .
ChrX	stalkie_big_nohaplotig	CDS	93811941	93811942	.	-	1	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 598 599 .
ChrX	stalkie_big_nohaplotig	CDS	93840067	93840074	.	-	0	Parent=comp151773_c0_seq1.mrna1;Target=comp151773_c0_seq1 600 607 .
ChrX	stalkie_big_nohaplotig	mRNA	93861100	93861852	.	+	.	ID=comp161870_c0_seq1.mrna2;geneID=comp161870_c0_seq1.path2;Name=comp161870_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=741;mismatches=12;indels=2;unknowns=0;Target=comp161870_c0_seq1 755 1 .;CDS_Target=comp161870_c0_seq1 316 206 .;locus=RLOC_00004927
ChrX	stalkie_big_nohaplotig	exon	93861100	93861852	98	+	.	Parent=comp161870_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	93861304	93861413	.	+	0	Parent=comp161870_c0_seq1.mrna2
ChrX	gffcl	locus	93728791	93739350	.	+	.	ID=RLOC_00004928;geneIDs=comp112795_c0_seq1.path1;transcripts=comp112795_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	93728791	93739350	.	+	.	ID=comp112795_c0_seq1.mrna1;geneID=comp112795_c0_seq1.path1;Name=comp112795_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=1313;mismatches=1;indels=1;unknowns=0;locus=RLOC_00004928
ChrX	stalkie_big_nohaplotig	exon	93728791	93729829	99	+	.	Parent=comp112795_c0_seq1.mrna1;Target=comp112795_c0_seq1 1 1040 +
ChrX	stalkie_big_nohaplotig	exon	93739076	93739350	99	+	.	Parent=comp112795_c0_seq1.mrna1;Target=comp112795_c0_seq1 1041 1315 +
ChrX	stalkie_big_nohaplotig	CDS	93729492	93729829	.	+	0	Parent=comp112795_c0_seq1.mrna1;Target=comp112795_c0_seq1 703 1040 +
ChrX	stalkie_big_nohaplotig	CDS	93739076	93739115	.	+	1	Parent=comp112795_c0_seq1.mrna1;Target=comp112795_c0_seq1 1041 1080 +
ChrX	gffcl	locus	93866742	94038160	.	-	.	ID=RLOC_00004929;geneIDs=comp162664_c0_seq1.path1;transcripts=comp162664_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	93866742	94038160	.	-	.	ID=comp162664_c0_seq1.mrna1;geneID=comp162664_c0_seq1.path1;Name=comp162664_c0_seq1;Dir=indeterminatecoverage=91.7;identity=80.5;matches=1453;mismatches=184;indels=169;unknowns=0;Target=comp162664_c0_seq1 573 493 .;locus=RLOC_00004929
ChrX	stalkie_big_nohaplotig	exon	93866742	93867343	71	-	.	Parent=comp162664_c0_seq1.mrna1;Target=comp162664_c0_seq1 1715 1133 .
ChrX	stalkie_big_nohaplotig	exon	93867928	93867942	86	-	.	Parent=comp162664_c0_seq1.mrna1;Target=comp162664_c0_seq1 1132 1118 .
ChrX	stalkie_big_nohaplotig	exon	93869633	93869641	100	-	.	Parent=comp162664_c0_seq1.mrna1;Target=comp162664_c0_seq1 1117 1109 .
ChrX	stalkie_big_nohaplotig	exon	93873463	93873468	100	-	.	Parent=comp162664_c0_seq1.mrna1;Target=comp162664_c0_seq1 1108 1103 .
ChrX	stalkie_big_nohaplotig	exon	93873532	93873544	84	-	.	Parent=comp162664_c0_seq1.mrna1;Target=comp162664_c0_seq1 1102 1090 .
ChrX	stalkie_big_nohaplotig	exon	93876277	93876299	69	-	.	Parent=comp162664_c0_seq1.mrna1;Target=comp162664_c0_seq1 1089 1067 .
ChrX	stalkie_big_nohaplotig	exon	93878992	93878999	100	-	.	Parent=comp162664_c0_seq1.mrna1;Target=comp162664_c0_seq1 1066 1059 .
ChrX	stalkie_big_nohaplotig	exon	94036960	94037066	77	-	.	Parent=comp162664_c0_seq1.mrna1;Target=comp162664_c0_seq1 1058 943 .
ChrX	stalkie_big_nohaplotig	exon	94037095	94037123	82	-	.	Parent=comp162664_c0_seq1.mrna1;Target=comp162664_c0_seq1 924 896 .
ChrX	stalkie_big_nohaplotig	exon	94037227	94038160	86	-	.	Parent=comp162664_c0_seq1.mrna1;Target=comp162664_c0_seq1 895 1 .
ChrX	stalkie_big_nohaplotig	CDS	94037588	94037668	.	-	0	Parent=comp162664_c0_seq1.mrna1
ChrX	gffcl	locus	93936241	93937317	.	+	.	ID=RLOC_00004930;geneIDs=ORF1507.path1;transcripts=ORF1507.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	93936241	93937317	.	+	.	ID=ORF1507.mrna1;geneID=ORF1507.path1;Name=ORF1507;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1076;mismatches=1;indels=0;unknowns=0;Target=ORF1507 1077 1 .;locus=RLOC_00004930
ChrX	stalkie_big_nohaplotig	exon	93936241	93937317	99	+	.	Parent=ORF1507.mrna1
ChrX	stalkie_big_nohaplotig	CDS	93936241	93937317	.	+	0	Parent=ORF1507.mrna1
ChrX	gffcl	locus	94084548	94084915	.	+	.	ID=RLOC_00004933;geneIDs=Dv_FBgn0209645.1.path4;transcripts=Dv_FBgn0209645.1.mrna4
ChrX	stalkie_big_nohaplotig	mRNA	94084548	94084915	.	+	.	ID=Dv_FBgn0209645.1.mrna4;geneID=Dv_FBgn0209645.1.path4;Name=Dv_FBgn0209645.1;Dir=indeterminatecoverage=99.7;identity=98.6;matches=363;mismatches=5;indels=0;unknowns=0;Target=Dv_FBgn0209645.1 368 1 .;CDS_Target=Dv_FBgn0209645.1 366 1 .;locus=RLOC_00004933
ChrX	stalkie_big_nohaplotig	exon	94084548	94084915	98	+	.	Parent=Dv_FBgn0209645.1.mrna4
ChrX	stalkie_big_nohaplotig	CDS	94084548	94084913	.	+	0	Parent=Dv_FBgn0209645.1.mrna4
ChrX	gffcl	locus	94333005	95160507	.	-	.	ID=RLOC_00004935;geneIDs=comp161702_c0_seq1.path1;transcripts=comp161702_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	94333005	95160507	.	-	.	ID=comp161702_c0_seq1.mrna1;geneID=comp161702_c0_seq1.path1;Name=comp161702_c0_seq1;Dir=indeterminatecoverage=76.3;identity=95.7;matches=2030;mismatches=42;indels=49;unknowns=25;locus=RLOC_00004935
ChrX	stalkie_big_nohaplotig	exon	94333005	94333017	84	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2379 2368 .
ChrX	stalkie_big_nohaplotig	exon	94334103	94334105	100	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2367 2365 .
ChrX	stalkie_big_nohaplotig	exon	94339188	94339205	50	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2364 2337 .
ChrX	stalkie_big_nohaplotig	exon	94361064	94361068	100	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2336 2332 .
ChrX	stalkie_big_nohaplotig	exon	94362788	94362796	100	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2331 2323 .
ChrX	stalkie_big_nohaplotig	exon	94368789	94368793	100	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2322 2318 .
ChrX	stalkie_big_nohaplotig	exon	94371694	94371696	100	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2317 2315 .
ChrX	stalkie_big_nohaplotig	exon	94379408	94379410	100	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2314 2312 .
ChrX	stalkie_big_nohaplotig	exon	94389007	94389031	100	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2311 2287 .
ChrX	stalkie_big_nohaplotig	exon	94389101	94389102	100	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2286 2285 .
ChrX	stalkie_big_nohaplotig	exon	94395325	94395326	100	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2284 2283 .
ChrX	stalkie_big_nohaplotig	exon	94402541	94402545	100	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2282 2278 .
ChrX	stalkie_big_nohaplotig	exon	94407998	94407999	100	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2277 2276 .
ChrX	stalkie_big_nohaplotig	exon	94412952	94412966	86	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2275 2261 .
ChrX	stalkie_big_nohaplotig	exon	94417940	94417944	60	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2260 2256 .
ChrX	stalkie_big_nohaplotig	exon	94424765	94424775	90	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2255 2245 .
ChrX	stalkie_big_nohaplotig	exon	94432078	94432083	100	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2244 2239 .
ChrX	stalkie_big_nohaplotig	exon	94437968	94437972	100	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2238 2234 .
ChrX	stalkie_big_nohaplotig	exon	94438623	94438628	100	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2233 2228 .
ChrX	stalkie_big_nohaplotig	exon	94441732	94441738	100	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2227 2221 .
ChrX	stalkie_big_nohaplotig	exon	94450080	94450087	100	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2220 2213 .
ChrX	stalkie_big_nohaplotig	exon	94463265	94463266	100	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2212 2211 .
ChrX	stalkie_big_nohaplotig	exon	94468069	94468079	100	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2210 2200 .
ChrX	stalkie_big_nohaplotig	exon	94473669	94473672	100	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2199 2196 .
ChrX	stalkie_big_nohaplotig	exon	94477625	94477634	100	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2195 2186 .
ChrX	stalkie_big_nohaplotig	exon	94482408	94482411	100	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2185 2182 .
ChrX	stalkie_big_nohaplotig	exon	94483181	94483196	81	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2181 2168 .
ChrX	stalkie_big_nohaplotig	exon	94485342	94485354	84	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2167 2155 .
ChrX	stalkie_big_nohaplotig	exon	94490355	94490362	75	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2154 2147 .
ChrX	stalkie_big_nohaplotig	exon	94492488	94492498	100	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2146 2136 .
ChrX	stalkie_big_nohaplotig	exon	94493823	94493863	44	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2135 2070 .
ChrX	stalkie_big_nohaplotig	exon	94501290	94501312	40	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 2069 2045 .
ChrX	stalkie_big_nohaplotig	exon	95153389	95154277	99	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 1804 916 .
ChrX	stalkie_big_nohaplotig	exon	95154293	95154850	99	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 914 357 .
ChrX	stalkie_big_nohaplotig	exon	95160151	95160507	99	-	.	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 356 1 .
ChrX	stalkie_big_nohaplotig	CDS	95154405	95154850	.	-	2	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 802 357 .
ChrX	stalkie_big_nohaplotig	CDS	95160151	95160247	.	-	0	Parent=comp161702_c0_seq1.mrna1;Target=comp161702_c0_seq1 356 260 .
ChrX	gffcl	locus	94355533	96284754	.	+	.	ID=RLOC_00004937;geneIDs=comp162867_c0_seq1.path2;transcripts=comp162867_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	94355533	96284754	.	+	.	ID=comp162867_c0_seq1.mrna2;geneID=comp162867_c0_seq1.path2;Name=comp162867_c0_seq1;Dir=indeterminatecoverage=77.1;identity=99.5;matches=385;mismatches=2;indels=0;unknowns=0;Target=comp162867_c0_seq1 418 314 .;locus=RLOC_00004937
ChrX	stalkie_big_nohaplotig	exon	94355533	94355542	100	+	.	Parent=comp162867_c0_seq1.mrna2;Target=comp162867_c0_seq1 125 116 .
ChrX	stalkie_big_nohaplotig	exon	94361033	94361036	100	+	.	Parent=comp162867_c0_seq1.mrna2;Target=comp162867_c0_seq1 129 126 .
ChrX	stalkie_big_nohaplotig	exon	96284382	96284754	99	+	.	Parent=comp162867_c0_seq1.mrna2;Target=comp162867_c0_seq1 502 130 .
ChrX	stalkie_big_nohaplotig	CDS	96284566	96284670	.	+	0	Parent=comp162867_c0_seq1.mrna2
ChrX	gffcl	locus	94389171	94390239	.	-	.	ID=RLOC_00004938;geneIDs=comp161869_c2_seq1.path2;transcripts=comp161869_c2_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	94389171	94390239	.	-	.	ID=comp161869_c2_seq1.mrna2;geneID=comp161869_c2_seq1.path2;Name=comp161869_c2_seq1;Dir=indeterminatecoverage=98.9;identity=94.6;matches=1015;mismatches=53;indels=5;unknowns=0;Target=comp161869_c2_seq1 1072 1 .;CDS_Target=comp161869_c2_seq1 129 1 .;locus=RLOC_00004938
ChrX	stalkie_big_nohaplotig	exon	94389171	94390239	94	-	.	Parent=comp161869_c2_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	94390111	94390239	.	-	0	Parent=comp161869_c2_seq1.mrna2
ChrX	gffcl	locus	94538686	94538924	.	-	.	ID=RLOC_00004939;geneIDs=comp346636_c0_seq1.path3;transcripts=comp346636_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	94538686	94538924	.	-	.	ID=comp346636_c0_seq1.mrna3;geneID=comp346636_c0_seq1.path3;Name=comp346636_c0_seq1;Dir=indeterminatecoverage=93.7;identity=96.2;matches=230;mismatches=9;indels=0;unknowns=0;Target=comp346636_c0_seq1 255 17 .;CDS_Target=comp346636_c0_seq1 62 18 .;locus=RLOC_00004939
ChrX	stalkie_big_nohaplotig	exon	94538686	94538924	96	-	.	Parent=comp346636_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	CDS	94538879	94538923	.	-	0	Parent=comp346636_c0_seq1.mrna3
ChrX	gffcl	locus	94565893	94566247	.	-	.	ID=RLOC_00004941;geneIDs=comp154919_c1_seq1.path1;transcripts=comp154919_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	94565893	94566247	.	-	.	ID=comp154919_c1_seq1.mrna1;geneID=comp154919_c1_seq1.path1;Name=comp154919_c1_seq1;Dir=indeterminatecoverage=100.0;identity=94.1;matches=334;mismatches=18;indels=3;unknowns=0;Target=comp154919_c1_seq1 352 1 .;CDS_Target=comp154919_c1_seq1 62 57 .;locus=RLOC_00004941
ChrX	stalkie_big_nohaplotig	exon	94565893	94566247	94	-	.	Parent=comp154919_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	94566186	94566191	.	-	0	Parent=comp154919_c1_seq1.mrna1
ChrX	gffcl	locus	94655647	94656239	.	+	.	ID=RLOC_00004942;geneIDs=Dp_FBgn0249362.path6;transcripts=Dp_FBgn0249362.mrna6
ChrX	stalkie_big_nohaplotig	mRNA	94655647	94656239	.	+	.	ID=Dp_FBgn0249362.mrna6;geneID=Dp_FBgn0249362.path6;Name=Dp_FBgn0249362;Dir=indeterminatecoverage=100.0;identity=99.3;matches=590;mismatches=3;indels=1;unknowns=0;Target=Dp_FBgn0249362 594 1 .;locus=RLOC_00004942
ChrX	stalkie_big_nohaplotig	exon	94655647	94656239	99	+	.	Parent=Dp_FBgn0249362.mrna6
ChrX	stalkie_big_nohaplotig	CDS	94655647	94656239	.	+	0	Parent=Dp_FBgn0249362.mrna6
ChrX	gffcl	locus	94709951	94710156	.	-	.	ID=RLOC_00004944;geneIDs=comp58446_c0_seq1.path3;transcripts=comp58446_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	94709951	94710156	.	-	.	ID=comp58446_c0_seq1.mrna3;geneID=comp58446_c0_seq1.path3;Name=comp58446_c0_seq1;Dir=indeterminatecoverage=92.8;identity=95.6;matches=197;mismatches=9;indels=0;unknowns=0;Target=comp58446_c0_seq1 206 1 .;CDS_Target=comp58446_c0_seq1 64 2 .;locus=RLOC_00004944
ChrX	stalkie_big_nohaplotig	exon	94709951	94710156	95	-	.	Parent=comp58446_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	CDS	94710093	94710155	.	-	0	Parent=comp58446_c0_seq1.mrna3
ChrX	gffcl	locus	94711218	94711425	.	-	.	ID=RLOC_00004945;geneIDs=comp36261_c0_seq1.path1;transcripts=comp36261_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	94711218	94711425	.	-	.	ID=comp36261_c0_seq1.mrna1;geneID=comp36261_c0_seq1.path1;Name=comp36261_c0_seq1;Dir=indeterminatecoverage=100.0;identity=78.2;matches=169;mismatches=31;indels=16;unknowns=0;Target=comp36261_c0_seq1 208 1 .;CDS_Target=comp36261_c0_seq1 36 1 .;locus=RLOC_00004945
ChrX	stalkie_big_nohaplotig	exon	94711218	94711425	78	-	.	Parent=comp36261_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	94711390	94711425	.	-	0	Parent=comp36261_c0_seq1.mrna1
ChrX	gffcl	locus	94711561	94712004	.	+	.	ID=RLOC_00004946;geneIDs=comp165654_c1_seq1.path3;transcripts=comp165654_c1_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	94711561	94712004	.	+	.	ID=comp165654_c1_seq1.mrna3;geneID=comp165654_c1_seq1.path3;Name=comp165654_c1_seq1;Dir=indeterminatecoverage=99.8;identity=96.6;matches=431;mismatches=12;indels=3;unknowns=0;Target=comp165654_c1_seq1 445 1 .;CDS_Target=comp165654_c1_seq1 266 180 .;locus=RLOC_00004946
ChrX	stalkie_big_nohaplotig	exon	94711561	94712004	96	+	.	Parent=comp165654_c1_seq1.mrna3
ChrX	stalkie_big_nohaplotig	CDS	94711741	94711826	.	+	0	Parent=comp165654_c1_seq1.mrna3
ChrX	gffcl	locus	94713091	95705368	.	+	.	ID=RLOC_00004947;geneIDs=comp58446_c0_seq1.path1;transcripts=comp58446_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	94713091	95705368	.	+	.	ID=comp58446_c0_seq1.mrna1;geneID=comp58446_c0_seq1.path1;Name=comp58446_c0_seq1;Dir=antisensecoverage=100.0;identity=95.9;matches=213;mismatches=9;indels=0;unknowns=0;Target=comp58446_c0_seq1 1 54 .;locus=RLOC_00004947
ChrX	stalkie_big_nohaplotig	exon	94713091	94713113	100	+	.	Parent=comp58446_c0_seq1.mrna1;Target=comp58446_c0_seq1 200 222 -
ChrX	stalkie_big_nohaplotig	exon	95705170	95705368	95	+	.	Parent=comp58446_c0_seq1.mrna1;Target=comp58446_c0_seq1 1 199 -
ChrX	stalkie_big_nohaplotig	CDS	95705315	95705368	.	+	0	Parent=comp58446_c0_seq1.mrna1
ChrX	gffcl	locus	94715844	94716329	.	+	.	ID=RLOC_00004948;geneIDs=comp135892_c0_seq1.path2;transcripts=comp135892_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	94715844	94716329	.	+	.	ID=comp135892_c0_seq1.mrna2;geneID=comp135892_c0_seq1.path2;Name=comp135892_c0_seq1;Dir=indeterminatecoverage=99.8;identity=93.8;matches=456;mismatches=27;indels=3;unknowns=0;Target=comp135892_c0_seq1 483 1 .;CDS_Target=comp135892_c0_seq1 306 136 .;locus=RLOC_00004948
ChrX	stalkie_big_nohaplotig	exon	94715844	94716329	93	+	.	Parent=comp135892_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	94715980	94716150	.	+	0	Parent=comp135892_c0_seq1.mrna2
ChrX	gffcl	locus	94730620	94730947	.	-	.	ID=RLOC_00004949;geneIDs=comp151542_c0_seq1.path2;transcripts=comp151542_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	94730620	94730947	.	-	.	ID=comp151542_c0_seq1.mrna2;geneID=comp151542_c0_seq1.path2;Name=comp151542_c0_seq1;Dir=indeterminatecoverage=91.3;identity=97.3;matches=319;mismatches=8;indels=1;unknowns=0;Target=comp151542_c0_seq1 327 1 .;CDS_Target=comp151542_c0_seq1 104 3 .;locus=RLOC_00004949
ChrX	stalkie_big_nohaplotig	exon	94730620	94730947	97	-	.	Parent=comp151542_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	94730844	94730945	.	-	0	Parent=comp151542_c0_seq1.mrna2
ChrX	gffcl	locus	94731252	94731789	.	-	.	ID=RLOC_00004950;geneIDs=comp150766_c1_seq1.path2;transcripts=comp150766_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	94731252	94731789	.	-	.	ID=comp150766_c1_seq1.mrna2;geneID=comp150766_c1_seq1.path2;Name=comp150766_c1_seq1;Dir=indeterminatecoverage=89.9;identity=87.3;matches=495;mismatches=34;indels=38;unknowns=0;Target=comp150766_c1_seq1 558 1 .;CDS_Target=comp150766_c1_seq1 358 308 .;locus=RLOC_00004950
ChrX	stalkie_big_nohaplotig	exon	94731252	94731789	87	-	.	Parent=comp150766_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	94731448	94731483	.	-	0	Parent=comp150766_c1_seq1.mrna2
ChrX	gffcl	locus	94740567	94742012	.	-	.	ID=RLOC_00004951;geneIDs=FBgn0039711.3.path2;transcripts=FBgn0039711.3.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	94740567	94742012	.	-	.	ID=FBgn0039711.3.mrna2;geneID=FBgn0039711.3.path2;Name=FBgn0039711.3;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1446;mismatches=0;indels=0;unknowns=0;Target=FBgn0039711.3 1446 1 .;locus=RLOC_00004951
ChrX	stalkie_big_nohaplotig	exon	94740567	94742012	100	-	.	Parent=FBgn0039711.3.mrna2
ChrX	stalkie_big_nohaplotig	CDS	94740567	94742012	.	-	0	Parent=FBgn0039711.3.mrna2
ChrX	gffcl	locus	94742155	94742561	.	+	.	ID=RLOC_00004952;geneIDs=comp149553_c0_seq1.path2;transcripts=comp149553_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	94742155	94742561	.	+	.	ID=comp149553_c0_seq1.mrna2;geneID=comp149553_c0_seq1.path2;Name=comp149553_c0_seq1;Dir=indeterminatecoverage=90.4;identity=100.0;matches=407;mismatches=0;indels=0;unknowns=0;Target=comp149553_c0_seq1 407 1 .;CDS_Target=comp149553_c0_seq1 384 298 .;locus=RLOC_00004952
ChrX	stalkie_big_nohaplotig	exon	94742155	94742561	100	+	.	Parent=comp149553_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	94742452	94742538	.	+	0	Parent=comp149553_c0_seq1.mrna2
ChrX	gffcl	locus	94757905	94758947	.	+	.	ID=RLOC_00004953;geneIDs=comp144232_c0_seq1.path1;transcripts=comp144232_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	94757905	94758947	.	+	.	ID=comp144232_c0_seq1.mrna1;geneID=comp144232_c0_seq1.path1;Name=comp144232_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=1028;mismatches=13;indels=2;unknowns=0;Target=comp144232_c0_seq1 1041 1 .;CDS_Target=comp144232_c0_seq1 873 691 .;locus=RLOC_00004953
ChrX	stalkie_big_nohaplotig	exon	94757905	94758947	98	+	.	Parent=comp144232_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	94758597	94758779	.	+	0	Parent=comp144232_c0_seq1.mrna1
ChrX	gffcl	locus	94822697	94823104	.	-	.	ID=RLOC_00004954;geneIDs=comp147232_c0_seq1.path4;transcripts=comp147232_c0_seq1.mrna4
ChrX	stalkie_big_nohaplotig	mRNA	94822697	94823104	.	-	.	ID=comp147232_c0_seq1.mrna4;geneID=comp147232_c0_seq1.path4;Name=comp147232_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.5;matches=407;mismatches=0;indels=2;unknowns=0;Target=comp147232_c0_seq1 413 6 .;CDS_Target=comp147232_c0_seq1 279 136 .;locus=RLOC_00004954
ChrX	stalkie_big_nohaplotig	exon	94822697	94823104	99	-	.	Parent=comp147232_c0_seq1.mrna4
ChrX	stalkie_big_nohaplotig	CDS	94822831	94822974	.	-	0	Parent=comp147232_c0_seq1.mrna4
ChrX	gffcl	locus	94825952	94827172	.	-	.	ID=RLOC_00004955;geneIDs=comp161809_c0_seq1.path2;transcripts=comp161809_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	94825952	94827172	.	-	.	ID=comp161809_c0_seq1.mrna2;geneID=comp161809_c0_seq1.path2;Name=comp161809_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1220;mismatches=1;indels=0;unknowns=0;Target=comp161809_c0_seq1 1221 1 .;CDS_Target=comp161809_c0_seq1 941 759 .;locus=RLOC_00004955
ChrX	stalkie_big_nohaplotig	exon	94825952	94827172	99	-	.	Parent=comp161809_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	94826232	94826414	.	-	0	Parent=comp161809_c0_seq1.mrna2
ChrX	gffcl	locus	94830047	94830487	.	+	.	ID=RLOC_00004957;geneIDs=Dp_FBgn0245412.2.path8;transcripts=Dp_FBgn0245412.2.mrna8
ChrX	stalkie_big_nohaplotig	mRNA	94830047	94830487	.	+	.	ID=Dp_FBgn0245412.2.mrna8;geneID=Dp_FBgn0245412.2.path8;Name=Dp_FBgn0245412.2;Dir=indeterminatecoverage=100.0;identity=98.0;matches=438;mismatches=3;indels=6;unknowns=0;Target=Dp_FBgn0245412.2 447 1 .;locus=RLOC_00004957
ChrX	stalkie_big_nohaplotig	exon	94830047	94830487	97	+	.	Parent=Dp_FBgn0245412.2.mrna8
ChrX	stalkie_big_nohaplotig	CDS	94830047	94830487	.	+	0	Parent=Dp_FBgn0245412.2.mrna8
ChrX	gffcl	locus	94849411	94850787	.	+	.	ID=RLOC_00004958;geneIDs=ORF864.path1;transcripts=ORF864.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	94849411	94850787	.	+	.	ID=ORF864.mrna1;geneID=ORF864.path1;Name=ORF864;Dir=indeterminatecoverage=100.0;identity=97.8;matches=1352;mismatches=23;indels=7;unknowns=0;Target=ORF864 1380 1 .;CDS_Target=ORF864 16 2 .;locus=RLOC_00004958
ChrX	stalkie_big_nohaplotig	exon	94849411	94850787	97	+	.	Parent=ORF864.mrna1
ChrX	stalkie_big_nohaplotig	CDS	94849412	94849426	.	+	0	Parent=ORF864.mrna1
ChrX	gffcl	locus	94895547	94896328	.	-	.	ID=RLOC_00004959;geneIDs=comp145898_c0_seq1.path2;transcripts=comp145898_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	94895547	94896328	.	-	.	ID=comp145898_c0_seq1.mrna2;geneID=comp145898_c0_seq1.path2;Name=comp145898_c0_seq1;Dir=antisensecoverage=100.0;identity=98.7;matches=658;mismatches=8;indels=1;unknowns=0;locus=RLOC_00004959
ChrX	stalkie_big_nohaplotig	exon	94895547	94895719	95	-	.	Parent=comp145898_c0_seq1.mrna2;Target=comp145898_c0_seq1 1 173 -
ChrX	stalkie_big_nohaplotig	exon	94895836	94896328	99	-	.	Parent=comp145898_c0_seq1.mrna2;Target=comp145898_c0_seq1 174 667 -
ChrX	stalkie_big_nohaplotig	CDS	94895697	94895719	.	-	2	Parent=comp145898_c0_seq1.mrna2;Target=comp145898_c0_seq1 151 173 .
ChrX	stalkie_big_nohaplotig	CDS	94895836	94896196	.	-	0	Parent=comp145898_c0_seq1.mrna2;Target=comp145898_c0_seq1 174 534 .
ChrX	gffcl	locus	94952540	94953200	.	+	.	ID=RLOC_00004962;geneIDs=comp63271_c0_seq1.path3;transcripts=comp63271_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	94952540	94953200	.	+	.	ID=comp63271_c0_seq1.mrna3;geneID=comp63271_c0_seq1.path3;Name=comp63271_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.4;matches=657;mismatches=3;indels=1;unknowns=0;Target=comp63271_c0_seq1 670 11 .;CDS_Target=comp63271_c0_seq1 104 42 .;locus=RLOC_00004962
ChrX	stalkie_big_nohaplotig	exon	94952540	94953200	99	+	.	Parent=comp63271_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	CDS	94952571	94952633	.	+	0	Parent=comp63271_c0_seq1.mrna3
ChrX	gffcl	locus	95052024	95055077	.	+	.	ID=RLOC_00004963;geneIDs=ORF101.path2;transcripts=ORF101.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	95052024	95055077	.	+	.	ID=ORF101.mrna2;geneID=ORF101.path2;Name=ORF101;Dir=indeterminatecoverage=100.0;identity=99.8;matches=3049;mismatches=5;indels=0;unknowns=0;Target=ORF101 3054 1 .;locus=RLOC_00004963
ChrX	stalkie_big_nohaplotig	exon	95052024	95055077	99	+	.	Parent=ORF101.mrna2
ChrX	stalkie_big_nohaplotig	CDS	95052024	95055077	.	+	0	Parent=ORF101.mrna2
ChrX	gffcl	locus	95107774	95115131	.	+	.	ID=RLOC_00004965;geneIDs=comp162538_c1_seq1.path1;transcripts=comp162538_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95107774	95115131	.	+	.	ID=comp162538_c1_seq1.mrna1;geneID=comp162538_c1_seq1.path1;Name=comp162538_c1_seq1;Dir=sensecoverage=96.4;identity=97.2;matches=1073;mismatches=27;indels=4;unknowns=100;Target=comp162538_c1_seq1 984 1139 +;locus=RLOC_00004965
ChrX	stalkie_big_nohaplotig	exon	95107774	95108526	98	+	.	Parent=comp162538_c1_seq1.mrna1;Target=comp162538_c1_seq1 17 769 +
ChrX	stalkie_big_nohaplotig	exon	95108661	95108759	95	+	.	Parent=comp162538_c1_seq1.mrna1;Target=comp162538_c1_seq1 770 868 +
ChrX	stalkie_big_nohaplotig	exon	95110232	95110323	90	+	.	Parent=comp162538_c1_seq1.mrna1;Target=comp162538_c1_seq1 869 956 +
ChrX	stalkie_big_nohaplotig	exon	95114872	95115131	95	+	.	Parent=comp162538_c1_seq1.mrna1;Target=comp162538_c1_seq1 957 1216 +
ChrX	stalkie_big_nohaplotig	CDS	95114899	95115054	.	+	0	Parent=comp162538_c1_seq1.mrna1
ChrX	gffcl	locus	95116422	95120127	.	+	.	ID=RLOC_00004966;geneIDs=comp120402_c0_seq1.path1;transcripts=comp120402_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95116422	95120127	.	+	.	ID=comp120402_c0_seq1.mrna1;geneID=comp120402_c0_seq1.path1;Name=comp120402_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=1130;mismatches=1;indels=0;unknowns=0;locus=RLOC_00004966
ChrX	stalkie_big_nohaplotig	exon	95116422	95116672	100	+	.	Parent=comp120402_c0_seq1.mrna1;Target=comp120402_c0_seq1 881 1131 -
ChrX	stalkie_big_nohaplotig	exon	95116746	95117245	100	+	.	Parent=comp120402_c0_seq1.mrna1;Target=comp120402_c0_seq1 381 880 -
ChrX	stalkie_big_nohaplotig	exon	95119748	95120127	99	+	.	Parent=comp120402_c0_seq1.mrna1;Target=comp120402_c0_seq1 1 380 -
ChrX	stalkie_big_nohaplotig	CDS	95116634	95116672	.	+	0	Parent=comp120402_c0_seq1.mrna1;Target=comp120402_c0_seq1 881 919 .
ChrX	stalkie_big_nohaplotig	CDS	95116746	95117093	.	+	0	Parent=comp120402_c0_seq1.mrna1;Target=comp120402_c0_seq1 533 880 .
ChrX	gffcl	locus	95133130	95134828	.	+	.	ID=RLOC_00004967;geneIDs=comp152287_c0_seq1.path1;transcripts=comp152287_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95133130	95134828	.	+	.	ID=comp152287_c0_seq1.mrna1;geneID=comp152287_c0_seq1.path1;Name=comp152287_c0_seq1;Dir=sensecoverage=99.8;identity=97.6;matches=440;mismatches=9;indels=2;unknowns=0;Target=comp152287_c0_seq1 2 31 +;locus=RLOC_00004967
ChrX	stalkie_big_nohaplotig	exon	95133130	95133445	97	+	.	Parent=comp152287_c0_seq1.mrna1;Target=comp152287_c0_seq1 2 319 +
ChrX	stalkie_big_nohaplotig	exon	95134696	95134828	98	+	.	Parent=comp152287_c0_seq1.mrna1;Target=comp152287_c0_seq1 320 452 +
ChrX	stalkie_big_nohaplotig	CDS	95133130	95133158	.	+	0	Parent=comp152287_c0_seq1.mrna1
ChrX	gffcl	locus	95136779	95137243	.	.	.	ID=RLOC_00004968;geneIDs=comp115372_c0_seq1.path1,comp143136_c0_seq1.path1;transcripts=comp115372_c0_seq1.mrna1,comp143136_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95136779	95137031	.	-	.	ID=comp115372_c0_seq1.mrna1;geneID=comp115372_c0_seq1.path1;Name=comp115372_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=251;mismatches=2;indels=0;unknowns=0;Target=comp115372_c0_seq1 253 1 .;CDS_Target=comp115372_c0_seq1 114 1 .;locus=RLOC_00004968
ChrX	stalkie_big_nohaplotig	exon	95136779	95137031	99	-	.	Parent=comp115372_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	95136918	95137031	.	-	0	Parent=comp115372_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95136780	95137243	.	+	.	ID=comp143136_c0_seq1.mrna1;geneID=comp143136_c0_seq1.path1;Name=comp143136_c0_seq1;Dir=sensecoverage=99.7;identity=97.3;matches=293;mismatches=8;indels=0;unknowns=0;locus=RLOC_00004968
ChrX	stalkie_big_nohaplotig	exon	95136780	95136800	100	+	.	Parent=comp143136_c0_seq1.mrna1;Target=comp143136_c0_seq1 1 21 +
ChrX	stalkie_big_nohaplotig	exon	95136964	95137243	97	+	.	Parent=comp143136_c0_seq1.mrna1;Target=comp143136_c0_seq1 22 301 +
ChrX	stalkie_big_nohaplotig	CDS	95136781	95136800	.	+	0	Parent=comp143136_c0_seq1.mrna1;Target=comp143136_c0_seq1 2 21 +
ChrX	stalkie_big_nohaplotig	CDS	95136964	95137024	.	+	1	Parent=comp143136_c0_seq1.mrna1;Target=comp143136_c0_seq1 22 82 +
ChrX	gffcl	locus	95138643	95144834	.	.	.	ID=RLOC_00004969;geneIDs=comp155444_c0_seq1.path1,comp158141_c0_seq1.path1;transcripts=comp158141_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95139418	95144834	.	-	.	ID=comp158141_c0_seq1.mrna1;geneID=comp158141_c0_seq1.path1;Name=comp158141_c0_seq1;Dir=antisensecoverage=78.8;identity=99.5;matches=3685;mismatches=15;indels=4;unknowns=0;locus=RLOC_00004969
ChrX	stalkie_big_nohaplotig	exon	95139418	95142846	99	-	.	Parent=comp158141_c0_seq1.mrna1;Target=comp158141_c0_seq1 24 3451 -
ChrX	stalkie_big_nohaplotig	exon	95144563	95144834	94	-	.	Parent=comp158141_c0_seq1.mrna1;Target=comp158141_c0_seq1 3452 3726 -
ChrX	stalkie_big_nohaplotig	CDS	95142701	95142846	.	-	2	Parent=comp158141_c0_seq1.mrna1;Target=comp158141_c0_seq1 3306 3451 .
ChrX	stalkie_big_nohaplotig	CDS	95144563	95144833	.	-	0	Parent=comp158141_c0_seq1.mrna1;Target=comp158141_c0_seq1 3452 3725 .
ChrX	gffcl	locus	95176400	95176882	.	+	.	ID=RLOC_00004970;geneIDs=comp172481_c0_seq1.path1;transcripts=comp172481_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95176400	95176882	.	+	.	ID=comp172481_c0_seq1.mrna1;geneID=comp172481_c0_seq1.path1;Name=comp172481_c0_seq1;Dir=indeterminatecoverage=96.0;identity=99.6;matches=481;mismatches=2;indels=0;unknowns=0;Target=comp172481_c0_seq1 503 21 .;CDS_Target=comp172481_c0_seq1 148 23 .;locus=RLOC_00004970
ChrX	stalkie_big_nohaplotig	exon	95176400	95176882	99	+	.	Parent=comp172481_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	95176402	95176527	.	+	0	Parent=comp172481_c0_seq1.mrna1
ChrX	gffcl	locus	95179754	95180562	.	+	.	ID=RLOC_00004971;geneIDs=comp137080_c0_seq1.path1;transcripts=comp137080_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95179754	95180562	.	+	.	ID=comp137080_c0_seq1.mrna1;geneID=comp137080_c0_seq1.path1;Name=comp137080_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=808;mismatches=1;indels=0;unknowns=0;Target=comp137080_c0_seq1 809 1 .;CDS_Target=comp137080_c0_seq1 41 3 .;locus=RLOC_00004971
ChrX	stalkie_big_nohaplotig	exon	95179754	95180562	99	+	.	Parent=comp137080_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	95179756	95179794	.	+	0	Parent=comp137080_c0_seq1.mrna1
ChrX	gffcl	locus	95185752	95186720	.	-	.	ID=RLOC_00004972;geneIDs=comp155710_c0_seq1.path2;transcripts=comp155710_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	95185752	95186720	.	-	.	ID=comp155710_c0_seq1.mrna2;geneID=comp155710_c0_seq1.path2;Name=comp155710_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=956;mismatches=13;indels=5;unknowns=0;Target=comp155710_c0_seq1 974 1 .;CDS_Target=comp155710_c0_seq1 874 800 .;locus=RLOC_00004972
ChrX	stalkie_big_nohaplotig	exon	95185752	95186720	98	-	.	Parent=comp155710_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	95185847	95185921	.	-	0	Parent=comp155710_c0_seq1.mrna2
ChrX	gffcl	locus	95279976	95280847	.	+	.	ID=RLOC_00004976;geneIDs=ORF2707.path3;transcripts=ORF2707.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	95279976	95280847	.	+	.	ID=ORF2707.mrna3;geneID=ORF2707.path3;Name=ORF2707;Dir=sensecoverage=100.0;identity=100.0;matches=819;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004976
ChrX	stalkie_big_nohaplotig	exon	95279976	95280227	100	+	.	Parent=ORF2707.mrna3;Target=ORF2707 1 252 +
ChrX	stalkie_big_nohaplotig	exon	95280281	95280847	100	+	.	Parent=ORF2707.mrna3;Target=ORF2707 253 819 +
ChrX	stalkie_big_nohaplotig	CDS	95279976	95280227	.	+	0	Parent=ORF2707.mrna3;Target=ORF2707 1 252 +
ChrX	stalkie_big_nohaplotig	CDS	95280281	95280847	.	+	0	Parent=ORF2707.mrna3;Target=ORF2707 253 819 +
ChrX	gffcl	locus	95283765	95285569	.	-	.	ID=RLOC_00004977;geneIDs=ORF2444.path1;transcripts=ORF2444.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95283765	95285569	.	-	.	ID=ORF2444.mrna1;geneID=ORF2444.path1;Name=ORF2444;Dir=sensecoverage=100.0;identity=100.0;matches=858;mismatches=0;indels=0;unknowns=0;locus=RLOC_00004977
ChrX	stalkie_big_nohaplotig	exon	95283765	95284586	100	-	.	Parent=ORF2444.mrna1;Target=ORF2444 37 858 +
ChrX	stalkie_big_nohaplotig	exon	95285534	95285569	100	-	.	Parent=ORF2444.mrna1;Target=ORF2444 1 36 +
ChrX	stalkie_big_nohaplotig	CDS	95283765	95284586	.	-	0	Parent=ORF2444.mrna1;Target=ORF2444 37 858 +
ChrX	stalkie_big_nohaplotig	CDS	95285534	95285569	.	-	0	Parent=ORF2444.mrna1;Target=ORF2444 1 36 +
ChrX	gffcl	locus	95285939	95288287	.	-	.	ID=RLOC_00004978;geneIDs=comp143330_c0_seq1.path1;transcripts=comp143330_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95285939	95288287	.	-	.	ID=comp143330_c0_seq1.mrna1;geneID=comp143330_c0_seq1.path1;Name=comp143330_c0_seq1;Dir=antisensecoverage=97.1;identity=100.0;matches=808;mismatches=0;indels=0;unknowns=0;Target=comp143330_c0_seq1 242 343 .;locus=RLOC_00004978
ChrX	stalkie_big_nohaplotig	exon	95285939	95286346	100	-	.	Parent=comp143330_c0_seq1.mrna1;Target=comp143330_c0_seq1 25 432 -
ChrX	stalkie_big_nohaplotig	exon	95286413	95286539	100	-	.	Parent=comp143330_c0_seq1.mrna1;Target=comp143330_c0_seq1 433 559 -
ChrX	stalkie_big_nohaplotig	exon	95287949	95288097	100	-	.	Parent=comp143330_c0_seq1.mrna1;Target=comp143330_c0_seq1 560 708 -
ChrX	stalkie_big_nohaplotig	exon	95288164	95288287	100	-	.	Parent=comp143330_c0_seq1.mrna1;Target=comp143330_c0_seq1 709 832 -
ChrX	stalkie_big_nohaplotig	CDS	95286156	95286257	.	-	0	Parent=comp143330_c0_seq1.mrna1
ChrX	gffcl	locus	95339686	95339885	.	+	.	ID=RLOC_00004979;geneIDs=comp148496_c0_seq1.path5;transcripts=comp148496_c0_seq1.mrna5
ChrX	stalkie_big_nohaplotig	mRNA	95339686	95339885	.	+	.	ID=comp148496_c0_seq1.mrna5;geneID=comp148496_c0_seq1.path5;Name=comp148496_c0_seq1;Dir=indeterminatecoverage=91.8;identity=72.8;matches=187;mismatches=12;indels=58;unknowns=0;Target=comp148496_c0_seq1 256 1 .;CDS_Target=comp148496_c0_seq1 64 56 .;locus=RLOC_00004979
ChrX	stalkie_big_nohaplotig	exon	95339686	95339885	72	+	.	Parent=comp148496_c0_seq1.mrna5
ChrX	stalkie_big_nohaplotig	CDS	95339741	95339747	.	+	0	Parent=comp148496_c0_seq1.mrna5
ChrX	gffcl	locus	95355232	95355431	.	-	.	ID=RLOC_00004980;geneIDs=comp148496_c0_seq1.path2;transcripts=comp148496_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	95355232	95355431	.	-	.	ID=comp148496_c0_seq1.mrna2;geneID=comp148496_c0_seq1.path2;Name=comp148496_c0_seq1;Dir=indeterminatecoverage=91.8;identity=73.2;matches=188;mismatches=11;indels=58;unknowns=0;Target=comp148496_c0_seq1 256 1 .;CDS_Target=comp148496_c0_seq1 64 56 .;locus=RLOC_00004980
ChrX	stalkie_big_nohaplotig	exon	95355232	95355431	73	-	.	Parent=comp148496_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	95355368	95355376	.	-	0	Parent=comp148496_c0_seq1.mrna2
ChrX	gffcl	locus	95400513	95407423	.	+	.	ID=RLOC_00004981;geneIDs=comp148496_c0_seq1.path1;transcripts=comp148496_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95400513	95407423	.	+	.	ID=comp148496_c0_seq1.mrna1;geneID=comp148496_c0_seq1.path1;Name=comp148496_c0_seq1;Dir=antisensecoverage=100.0;identity=74.6;matches=209;mismatches=12;indels=59;unknowns=0;locus=RLOC_00004981
ChrX	stalkie_big_nohaplotig	exon	95400513	95400535	95	+	.	Parent=comp148496_c0_seq1.mrna1;Target=comp148496_c0_seq1 257 279 -
ChrX	stalkie_big_nohaplotig	exon	95407225	95407423	72	+	.	Parent=comp148496_c0_seq1.mrna1;Target=comp148496_c0_seq1 1 256 -
ChrX	stalkie_big_nohaplotig	CDS	95400514	95400535	.	+	0	Parent=comp148496_c0_seq1.mrna1;Target=comp148496_c0_seq1 257 278 .
ChrX	stalkie_big_nohaplotig	CDS	95407225	95407277	.	+	2	Parent=comp148496_c0_seq1.mrna1;Target=comp148496_c0_seq1 204 256 .
ChrX	gffcl	locus	95438119	95438897	.	-	.	ID=RLOC_00004982;geneIDs=comp74486_c0_seq1.path1;transcripts=comp74486_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95438119	95438897	.	-	.	ID=comp74486_c0_seq1.mrna1;geneID=comp74486_c0_seq1.path1;Name=comp74486_c0_seq1;Dir=indeterminatecoverage=99.0;identity=100.0;matches=779;mismatches=0;indels=0;unknowns=0;Target=comp74486_c0_seq1 785 7 .;CDS_Target=comp74486_c0_seq1 436 323 .;locus=RLOC_00004982
ChrX	stalkie_big_nohaplotig	exon	95438119	95438897	100	-	.	Parent=comp74486_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	95438468	95438581	.	-	0	Parent=comp74486_c0_seq1.mrna1
ChrX	gffcl	locus	95442524	95444199	.	-	.	ID=RLOC_00004983;geneIDs=FBgn0005411.4.path1;transcripts=FBgn0005411.4.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95442524	95444199	.	-	.	ID=FBgn0005411.4.mrna1;geneID=FBgn0005411.4.path1;Name=FBgn0005411.4;Dir=sensecoverage=100.0;identity=99.3;matches=998;mismatches=7;indels=0;unknowns=0;locus=RLOC_00004983
ChrX	stalkie_big_nohaplotig	exon	95442524	95442844	100	-	.	Parent=FBgn0005411.4.mrna1;Target=FBgn0005411.4 685 1005 +
ChrX	stalkie_big_nohaplotig	exon	95442905	95443027	100	-	.	Parent=FBgn0005411.4.mrna1;Target=FBgn0005411.4 562 684 +
ChrX	stalkie_big_nohaplotig	exon	95443384	95443472	98	-	.	Parent=FBgn0005411.4.mrna1;Target=FBgn0005411.4 473 561 +
ChrX	stalkie_big_nohaplotig	exon	95443533	95443979	98	-	.	Parent=FBgn0005411.4.mrna1;Target=FBgn0005411.4 26 472 +
ChrX	stalkie_big_nohaplotig	exon	95444175	95444199	100	-	.	Parent=FBgn0005411.4.mrna1;Target=FBgn0005411.4 1 25 +
ChrX	stalkie_big_nohaplotig	CDS	95442524	95442844	.	-	0	Parent=FBgn0005411.4.mrna1;Target=FBgn0005411.4 685 1005 +
ChrX	stalkie_big_nohaplotig	CDS	95442905	95443027	.	-	0	Parent=FBgn0005411.4.mrna1;Target=FBgn0005411.4 562 684 +
ChrX	stalkie_big_nohaplotig	CDS	95443384	95443472	.	-	2	Parent=FBgn0005411.4.mrna1;Target=FBgn0005411.4 473 561 +
ChrX	stalkie_big_nohaplotig	CDS	95443533	95443979	.	-	2	Parent=FBgn0005411.4.mrna1;Target=FBgn0005411.4 26 472 +
ChrX	stalkie_big_nohaplotig	CDS	95444175	95444199	.	-	0	Parent=FBgn0005411.4.mrna1;Target=FBgn0005411.4 1 25 +
ChrX	gffcl	locus	95487857	95488159	.	+	.	ID=RLOC_00004985;geneIDs=comp143633_c0_seq1.path1;transcripts=comp143633_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95487857	95488159	.	+	.	ID=comp143633_c0_seq1.mrna1;geneID=comp143633_c0_seq1.path1;Name=comp143633_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=301;mismatches=2;indels=0;unknowns=0;Target=comp143633_c0_seq1 303 1 .;CDS_Target=comp143633_c0_seq1 160 2 .;locus=RLOC_00004985
ChrX	stalkie_big_nohaplotig	exon	95487857	95488159	99	+	.	Parent=comp143633_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	95487858	95488016	.	+	0	Parent=comp143633_c0_seq1.mrna1
ChrX	gffcl	locus	95495914	95496899	.	+	.	ID=RLOC_00004986;geneIDs=comp162746_c0_seq1.path2;transcripts=comp162746_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	95495914	95496899	.	+	.	ID=comp162746_c0_seq1.mrna2;geneID=comp162746_c0_seq1.path2;Name=comp162746_c0_seq1;Dir=indeterminatecoverage=90.9;identity=99.4;matches=981;mismatches=5;indels=1;unknowns=0;Target=comp162746_c0_seq1 1086 100 .;CDS_Target=comp162746_c0_seq1 961 521 .;locus=RLOC_00004986
ChrX	stalkie_big_nohaplotig	exon	95495914	95496899	99	+	.	Parent=comp162746_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	95496335	95496775	.	+	0	Parent=comp162746_c0_seq1.mrna2
ChrX	gffcl	locus	95530347	95531224	.	+	.	ID=RLOC_00004987;geneIDs=comp150758_c1_seq1.path1;transcripts=comp150758_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95530347	95531224	.	+	.	ID=comp150758_c1_seq1.mrna1;geneID=comp150758_c1_seq1.path1;Name=comp150758_c1_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=612;mismatches=0;indels=0;unknowns=0;Target=comp150758_c1_seq1 351 434 .;locus=RLOC_00004987
ChrX	stalkie_big_nohaplotig	exon	95530347	95530453	100	+	.	Parent=comp150758_c1_seq1.mrna1;Target=comp150758_c1_seq1 506 612 -
ChrX	stalkie_big_nohaplotig	exon	95530529	95530771	100	+	.	Parent=comp150758_c1_seq1.mrna1;Target=comp150758_c1_seq1 263 505 -
ChrX	stalkie_big_nohaplotig	exon	95530897	95531026	100	+	.	Parent=comp150758_c1_seq1.mrna1;Target=comp150758_c1_seq1 133 262 -
ChrX	stalkie_big_nohaplotig	exon	95531093	95531224	100	+	.	Parent=comp150758_c1_seq1.mrna1;Target=comp150758_c1_seq1 1 132 -
ChrX	stalkie_big_nohaplotig	CDS	95530600	95530683	.	+	0	Parent=comp150758_c1_seq1.mrna1
ChrX	gffcl	locus	95532685	95533537	.	-	.	ID=RLOC_00004988;geneIDs=comp536388_c0_seq1.path1;transcripts=comp536388_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95532685	95533537	.	-	.	ID=comp536388_c0_seq1.mrna1;geneID=comp536388_c0_seq1.path1;Name=comp536388_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=620;mismatches=0;indels=0;unknowns=0;Target=comp536388_c0_seq1 193 255 +;locus=RLOC_00004988
ChrX	stalkie_big_nohaplotig	exon	95532685	95533203	100	-	.	Parent=comp536388_c0_seq1.mrna1;Target=comp536388_c0_seq1 102 620 +
ChrX	stalkie_big_nohaplotig	exon	95533437	95533537	100	-	.	Parent=comp536388_c0_seq1.mrna1;Target=comp536388_c0_seq1 1 101 +
ChrX	stalkie_big_nohaplotig	CDS	95533050	95533112	.	-	0	Parent=comp536388_c0_seq1.mrna1
ChrX	gffcl	locus	95566799	95872998	.	-	.	ID=RLOC_00004989;geneIDs=comp163572_c0_seq1.path1;transcripts=comp163572_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95566799	95872998	.	-	.	ID=comp163572_c0_seq1.mrna1;geneID=comp163572_c0_seq1.path1;Name=comp163572_c0_seq1;Dir=indeterminatecoverage=85.1;identity=72.7;matches=3025;mismatches=604;indels=533;unknowns=0;Target=comp163572_c0_seq1 1475 1428 .;locus=RLOC_00004989
ChrX	stalkie_big_nohaplotig	exon	95566799	95567083	91	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 5903 5621 .
ChrX	stalkie_big_nohaplotig	exon	95599794	95599804	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 5508 5498 .
ChrX	stalkie_big_nohaplotig	exon	95605850	95605854	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 5497 5493 .
ChrX	stalkie_big_nohaplotig	exon	95621501	95621510	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 5332 5323 .
ChrX	stalkie_big_nohaplotig	exon	95629646	95629649	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 5321 5318 .
ChrX	stalkie_big_nohaplotig	exon	95630300	95630305	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 5317 5312 .
ChrX	stalkie_big_nohaplotig	exon	95630914	95630915	5	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 5311 5272 .
ChrX	stalkie_big_nohaplotig	exon	95634679	95634688	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 5252 5243 .
ChrX	stalkie_big_nohaplotig	exon	95640036	95640045	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 5089 5080 .
ChrX	stalkie_big_nohaplotig	exon	95642193	95642227	51	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 5071 5027 .
ChrX	stalkie_big_nohaplotig	exon	95688616	95688625	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 5015 5006 .
ChrX	stalkie_big_nohaplotig	exon	95695117	95695124	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 5005 4998 .
ChrX	stalkie_big_nohaplotig	exon	95698921	95698930	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4925 4916 .
ChrX	stalkie_big_nohaplotig	exon	95703497	95703499	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4915 4913 .
ChrX	stalkie_big_nohaplotig	exon	95705352	95705362	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4882 4872 .
ChrX	stalkie_big_nohaplotig	exon	95707956	95707959	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4871 4868 .
ChrX	stalkie_big_nohaplotig	exon	95708232	95708237	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4867 4862 .
ChrX	stalkie_big_nohaplotig	exon	95732570	95732580	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4762 4752 .
ChrX	stalkie_big_nohaplotig	exon	95737625	95737627	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4751 4749 .
ChrX	stalkie_big_nohaplotig	exon	95738090	95738097	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4748 4741 .
ChrX	stalkie_big_nohaplotig	exon	95745921	95745923	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4740 4738 .
ChrX	stalkie_big_nohaplotig	exon	95752177	95752185	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4731 4723 .
ChrX	stalkie_big_nohaplotig	exon	95752204	95752211	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4705 4698 .
ChrX	stalkie_big_nohaplotig	exon	95764952	95765027	14	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4697 4686 .
ChrX	stalkie_big_nohaplotig	exon	95765078	95765084	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4685 4679 .
ChrX	stalkie_big_nohaplotig	exon	95765182	95765187	83	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4678 4673 .
ChrX	stalkie_big_nohaplotig	exon	95765322	95765364	32	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4672 4659 .
ChrX	stalkie_big_nohaplotig	exon	95765448	95765481	38	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4658 4644 .
ChrX	stalkie_big_nohaplotig	exon	95765495	95765545	29	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4643 4627 .
ChrX	stalkie_big_nohaplotig	exon	95765604	95765612	88	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4626 4618 .
ChrX	stalkie_big_nohaplotig	exon	95765668	95765766	20	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4617 4597 .
ChrX	stalkie_big_nohaplotig	exon	95765897	95765971	29	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4596 4571 .
ChrX	stalkie_big_nohaplotig	exon	95766077	95766094	75	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4570 4551 .
ChrX	stalkie_big_nohaplotig	exon	95766331	95766351	66	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4550 4537 .
ChrX	stalkie_big_nohaplotig	exon	95777652	95777654	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4536 4534 .
ChrX	stalkie_big_nohaplotig	exon	95784140	95784146	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4533 4527 .
ChrX	stalkie_big_nohaplotig	exon	95784250	95784254	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4526 4522 .
ChrX	stalkie_big_nohaplotig	exon	95785095	95785100	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4521 4516 .
ChrX	stalkie_big_nohaplotig	exon	95785135	95785142	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4456 4449 .
ChrX	stalkie_big_nohaplotig	exon	95797808	95797819	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4372 4361 .
ChrX	stalkie_big_nohaplotig	exon	95804702	95804712	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4248 4238 .
ChrX	stalkie_big_nohaplotig	exon	95805796	95805804	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4121 4113 .
ChrX	stalkie_big_nohaplotig	exon	95809603	95809638	48	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 4093 4058 .
ChrX	stalkie_big_nohaplotig	exon	95816560	95816569	100	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 3926 3917 .
ChrX	stalkie_big_nohaplotig	exon	95822348	95822550	23	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 3916 3810 .
ChrX	stalkie_big_nohaplotig	exon	95869809	95870435	85	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 3773 3149 .
ChrX	stalkie_big_nohaplotig	exon	95870667	95871163	83	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 3148 2644 .
ChrX	stalkie_big_nohaplotig	exon	95871283	95872998	77	-	.	Parent=comp163572_c0_seq1.mrna1;Target=comp163572_c0_seq1 2569 881 .
ChrX	stalkie_big_nohaplotig	CDS	95872404	95872451	.	-	0	Parent=comp163572_c0_seq1.mrna1
ChrX	gffcl	locus	95577928	95580151	.	-	.	ID=RLOC_00004990;geneIDs=comp160817_c0_seq1.path3;transcripts=comp160817_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	95577928	95580151	.	-	.	ID=comp160817_c0_seq1.mrna3;geneID=comp160817_c0_seq1.path3;Name=comp160817_c0_seq1;Dir=sensecoverage=96.9;identity=99.3;matches=1359;mismatches=7;indels=2;unknowns=0;Target=comp160817_c0_seq1 404 1057 +;locus=RLOC_00004990
ChrX	stalkie_big_nohaplotig	exon	95577928	95579016	99	-	.	Parent=comp160817_c0_seq1.mrna3;Target=comp160817_c0_seq1 324 1412 +
ChrX	stalkie_big_nohaplotig	exon	95579875	95580151	97	-	.	Parent=comp160817_c0_seq1.mrna3;Target=comp160817_c0_seq1 45 323 +
ChrX	stalkie_big_nohaplotig	CDS	95578283	95578936	.	-	0	Parent=comp160817_c0_seq1.mrna3
ChrX	gffcl	locus	95596146	95601494	.	+	.	ID=RLOC_00004991;geneIDs=comp162926_c0_seq1.path2;transcripts=comp162926_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	95596146	95601494	.	+	.	ID=comp162926_c0_seq1.mrna2;geneID=comp162926_c0_seq1.path2;Name=comp162926_c0_seq1;Dir=sensecoverage=96.8;identity=97.8;matches=499;mismatches=4;indels=7;unknowns=0;locus=RLOC_00004991
ChrX	stalkie_big_nohaplotig	exon	95596146	95596586	97	+	.	Parent=comp162926_c0_seq1.mrna2;Target=comp162926_c0_seq1 18 465 +
ChrX	stalkie_big_nohaplotig	exon	95601433	95601494	98	+	.	Parent=comp162926_c0_seq1.mrna2;Target=comp162926_c0_seq1 466 527 +
ChrX	stalkie_big_nohaplotig	CDS	95596308	95596586	.	+	0	Parent=comp162926_c0_seq1.mrna2;Target=comp162926_c0_seq1 187 465 +
ChrX	stalkie_big_nohaplotig	CDS	95601433	95601492	.	+	0	Parent=comp162926_c0_seq1.mrna2;Target=comp162926_c0_seq1 466 525 +
ChrX	gffcl	locus	95605883	95607174	.	+	.	ID=RLOC_00004992;geneIDs=comp152781_c1_seq1.path1;transcripts=comp152781_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95605883	95607174	.	+	.	ID=comp152781_c1_seq1.mrna1;geneID=comp152781_c1_seq1.path1;Name=comp152781_c1_seq1;Dir=antisensecoverage=99.9;identity=99.5;matches=819;mismatches=3;indels=1;unknowns=0;Target=comp152781_c1_seq1 691 822 .;locus=RLOC_00004992
ChrX	stalkie_big_nohaplotig	exon	95605883	95606220	100	+	.	Parent=comp152781_c1_seq1.mrna1;Target=comp152781_c1_seq1 486 823 -
ChrX	stalkie_big_nohaplotig	exon	95606691	95607174	99	+	.	Parent=comp152781_c1_seq1.mrna1;Target=comp152781_c1_seq1 1 485 -
ChrX	stalkie_big_nohaplotig	CDS	95605884	95606015	.	+	0	Parent=comp152781_c1_seq1.mrna1
ChrX	gffcl	locus	95608774	95609595	.	-	.	ID=RLOC_00004993;geneIDs=comp161180_c0_seq1.path1;transcripts=comp161180_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95608774	95609595	.	-	.	ID=comp161180_c0_seq1.mrna1;geneID=comp161180_c0_seq1.path1;Name=comp161180_c0_seq1;Dir=indeterminatecoverage=98.2;identity=97.6;matches=802;mismatches=20;indels=0;unknowns=0;Target=comp161180_c0_seq1 822 1 .;CDS_Target=comp161180_c0_seq1 133 2 .;locus=RLOC_00004993
ChrX	stalkie_big_nohaplotig	exon	95608774	95609595	97	-	.	Parent=comp161180_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	95609463	95609594	.	-	0	Parent=comp161180_c0_seq1.mrna1
ChrX	gffcl	locus	95624046	95625948	.	+	.	ID=RLOC_00004994;geneIDs=comp160817_c0_seq1.path4;transcripts=comp160817_c0_seq1.mrna4
ChrX	stalkie_big_nohaplotig	mRNA	95624046	95625948	.	+	.	ID=comp160817_c0_seq1.mrna4;geneID=comp160817_c0_seq1.path4;Name=comp160817_c0_seq1;Dir=sensecoverage=73.9;identity=98.9;matches=1032;mismatches=11;indels=0;unknowns=0;Target=comp160817_c0_seq1 404 1057 +;locus=RLOC_00004994
ChrX	stalkie_big_nohaplotig	exon	95624046	95624324	96	+	.	Parent=comp160817_c0_seq1.mrna4;Target=comp160817_c0_seq1 45 323 +
ChrX	stalkie_big_nohaplotig	exon	95625185	95625948	99	+	.	Parent=comp160817_c0_seq1.mrna4;Target=comp160817_c0_seq1 324 1087 +
ChrX	stalkie_big_nohaplotig	CDS	95625265	95625918	.	+	0	Parent=comp160817_c0_seq1.mrna4
ChrX	gffcl	locus	95634699	95636924	.	+	.	ID=RLOC_00004995;geneIDs=comp160817_c0_seq1.path2;transcripts=comp160817_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	95634699	95636924	.	+	.	ID=comp160817_c0_seq1.mrna2;geneID=comp160817_c0_seq1.path2;Name=comp160817_c0_seq1;Dir=sensecoverage=96.9;identity=99.4;matches=1360;mismatches=6;indels=2;unknowns=0;Target=comp160817_c0_seq1 404 1057 +;locus=RLOC_00004995
ChrX	stalkie_big_nohaplotig	exon	95634699	95634975	97	+	.	Parent=comp160817_c0_seq1.mrna2;Target=comp160817_c0_seq1 45 323 +
ChrX	stalkie_big_nohaplotig	exon	95635836	95636924	99	+	.	Parent=comp160817_c0_seq1.mrna2;Target=comp160817_c0_seq1 324 1412 +
ChrX	stalkie_big_nohaplotig	CDS	95635916	95636569	.	+	0	Parent=comp160817_c0_seq1.mrna2
ChrX	gffcl	locus	95666501	95697439	.	+	.	ID=RLOC_00004996;geneIDs=comp163089_c0_seq1.path1;transcripts=comp163089_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95666501	95697439	.	+	.	ID=comp163089_c0_seq1.mrna1;geneID=comp163089_c0_seq1.path1;Name=comp163089_c0_seq1;Dir=antisensecoverage=98.7;identity=98.7;matches=2505;mismatches=19;indels=13;unknowns=0;locus=RLOC_00004996
ChrX	stalkie_big_nohaplotig	exon	95666501	95666690	100	+	.	Parent=comp163089_c0_seq1.mrna1;Target=comp163089_c0_seq1 2371 2560 -
ChrX	stalkie_big_nohaplotig	exon	95666748	95667073	97	+	.	Parent=comp163089_c0_seq1.mrna1;Target=comp163089_c0_seq1 2045 2370 -
ChrX	stalkie_big_nohaplotig	exon	95667136	95667409	99	+	.	Parent=comp163089_c0_seq1.mrna1;Target=comp163089_c0_seq1 1771 2044 -
ChrX	stalkie_big_nohaplotig	exon	95667470	95667773	99	+	.	Parent=comp163089_c0_seq1.mrna1;Target=comp163089_c0_seq1 1467 1770 -
ChrX	stalkie_big_nohaplotig	exon	95667846	95668664	97	+	.	Parent=comp163089_c0_seq1.mrna1;Target=comp163089_c0_seq1 635 1466 -
ChrX	stalkie_big_nohaplotig	exon	95696829	95697439	99	+	.	Parent=comp163089_c0_seq1.mrna1;Target=comp163089_c0_seq1 24 634 -
ChrX	stalkie_big_nohaplotig	CDS	95666556	95666690	.	+	0	Parent=comp163089_c0_seq1.mrna1;Target=comp163089_c0_seq1 2371 2505 .
ChrX	stalkie_big_nohaplotig	CDS	95666748	95666798	.	+	0	Parent=comp163089_c0_seq1.mrna1;Target=comp163089_c0_seq1 2320 2370 .
ChrX	gffcl	locus	95706430	95706637	.	-	.	ID=RLOC_00004997;geneIDs=comp36261_c0_seq1.path2;transcripts=comp36261_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	95706430	95706637	.	-	.	ID=comp36261_c0_seq1.mrna2;geneID=comp36261_c0_seq1.path2;Name=comp36261_c0_seq1;Dir=indeterminatecoverage=100.0;identity=78.2;matches=169;mismatches=31;indels=16;unknowns=0;Target=comp36261_c0_seq1 208 1 .;CDS_Target=comp36261_c0_seq1 36 1 .;locus=RLOC_00004997
ChrX	stalkie_big_nohaplotig	exon	95706430	95706637	78	-	.	Parent=comp36261_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	95706602	95706637	.	-	0	Parent=comp36261_c0_seq1.mrna2
ChrX	gffcl	locus	95706773	95707216	.	+	.	ID=RLOC_00004998;geneIDs=comp165654_c1_seq1.path4;transcripts=comp165654_c1_seq1.mrna4
ChrX	stalkie_big_nohaplotig	mRNA	95706773	95707216	.	+	.	ID=comp165654_c1_seq1.mrna4;geneID=comp165654_c1_seq1.path4;Name=comp165654_c1_seq1;Dir=indeterminatecoverage=99.8;identity=96.6;matches=431;mismatches=12;indels=3;unknowns=0;Target=comp165654_c1_seq1 445 1 .;CDS_Target=comp165654_c1_seq1 266 180 .;locus=RLOC_00004998
ChrX	stalkie_big_nohaplotig	exon	95706773	95707216	96	+	.	Parent=comp165654_c1_seq1.mrna4
ChrX	stalkie_big_nohaplotig	CDS	95706953	95707038	.	+	0	Parent=comp165654_c1_seq1.mrna4
ChrX	gffcl	locus	95708303	97220506	.	-	.	ID=RLOC_00004999;geneIDs=comp58446_c0_seq1.path2;transcripts=comp58446_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	95708303	97220506	.	-	.	ID=comp58446_c0_seq1.mrna2;geneID=comp58446_c0_seq1.path2;Name=comp58446_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.5;matches=212;mismatches=10;indels=0;unknowns=0;Target=comp58446_c0_seq1 64 2 .;locus=RLOC_00004999
ChrX	stalkie_big_nohaplotig	exon	95708303	95708325	100	-	.	Parent=comp58446_c0_seq1.mrna2;Target=comp58446_c0_seq1 222 200 .
ChrX	stalkie_big_nohaplotig	exon	97219864	97219931	98	-	.	Parent=comp58446_c0_seq1.mrna2;Target=comp58446_c0_seq1 199 132 .
ChrX	stalkie_big_nohaplotig	exon	97220376	97220506	93	-	.	Parent=comp58446_c0_seq1.mrna2;Target=comp58446_c0_seq1 131 1 .
ChrX	stalkie_big_nohaplotig	CDS	97220443	97220505	.	-	0	Parent=comp58446_c0_seq1.mrna2
ChrX	gffcl	locus	95715524	95716009	.	+	.	ID=RLOC_00005000;geneIDs=comp135892_c0_seq1.path3;transcripts=comp135892_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	95715524	95716009	.	+	.	ID=comp135892_c0_seq1.mrna3;geneID=comp135892_c0_seq1.path3;Name=comp135892_c0_seq1;Dir=indeterminatecoverage=99.8;identity=93.8;matches=456;mismatches=27;indels=3;unknowns=0;Target=comp135892_c0_seq1 483 1 .;CDS_Target=comp135892_c0_seq1 306 136 .;locus=RLOC_00005000
ChrX	stalkie_big_nohaplotig	exon	95715524	95716009	93	+	.	Parent=comp135892_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	CDS	95715660	95715830	.	+	0	Parent=comp135892_c0_seq1.mrna3
ChrX	gffcl	locus	95718534	95718588	.	-	.	ID=RLOC_00005001;geneIDs=comp264777_c0_seq1.path2;transcripts=comp264777_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	95718534	95718588	.	-	.	ID=comp264777_c0_seq1.mrna2;geneID=comp264777_c0_seq1.path2;Name=comp264777_c0_seq1;Dir=indeterminatecoverage=17.0;identity=83.9;matches=47;mismatches=8;indels=1;unknowns=0;Target=comp264777_c0_seq1 240 185 .;CDS_Target=comp264777_c0_seq1 202 185 .;locus=RLOC_00005001
ChrX	stalkie_big_nohaplotig	exon	95718534	95718588	83	-	.	Parent=comp264777_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	95718571	95718588	.	-	0	Parent=comp264777_c0_seq1.mrna2
ChrX	gffcl	locus	95718745	95718791	.	+	.	ID=RLOC_00005002;geneIDs=comp122966_c0_seq1.path1;transcripts=comp122966_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95718745	95718791	.	+	.	ID=comp122966_c0_seq1.mrna1;geneID=comp122966_c0_seq1.path1;Name=comp122966_c0_seq1;Dir=indeterminatecoverage=9.7;identity=97.9;matches=46;mismatches=1;indels=0;unknowns=0;Target=comp122966_c0_seq1 47 1 .;locus=RLOC_00005002
ChrX	stalkie_big_nohaplotig	exon	95718745	95718791	97	+	.	Parent=comp122966_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	95718745	95718791	.	+	0	Parent=comp122966_c0_seq1.mrna1
ChrX	gffcl	locus	95723372	95723795	.	-	.	ID=RLOC_00005003;geneIDs=comp148797_c0_seq1.path3;transcripts=comp148797_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	95723372	95723795	.	-	.	ID=comp148797_c0_seq1.mrna3;geneID=comp148797_c0_seq1.path3;Name=comp148797_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=419;mismatches=5;indels=1;unknowns=0;Target=comp148797_c0_seq1 425 1 .;CDS_Target=comp148797_c0_seq1 282 172 .;locus=RLOC_00005003
ChrX	stalkie_big_nohaplotig	exon	95723372	95723795	98	-	.	Parent=comp148797_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	CDS	95723515	95723625	.	-	0	Parent=comp148797_c0_seq1.mrna3
ChrX	gffcl	locus	95829736	95835397	.	-	.	ID=RLOC_00005004;geneIDs=comp145341_c0_seq1.path1;transcripts=comp145341_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95829736	95835397	.	-	.	ID=comp145341_c0_seq1.mrna1;geneID=comp145341_c0_seq1.path1;Name=comp145341_c0_seq1;Dir=sensecoverage=74.1;identity=99.5;matches=590;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005004
ChrX	stalkie_big_nohaplotig	exon	95829736	95830226	99	-	.	Parent=comp145341_c0_seq1.mrna1;Target=comp145341_c0_seq1 105 595 +
ChrX	stalkie_big_nohaplotig	exon	95835296	95835397	98	-	.	Parent=comp145341_c0_seq1.mrna1;Target=comp145341_c0_seq1 3 104 +
ChrX	gffcl	locus	95846447	95848869	.	+	.	ID=RLOC_00005005;geneIDs=comp160580_c0_seq1.path1;transcripts=comp160580_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95846447	95848869	.	+	.	ID=comp160580_c0_seq1.mrna1;geneID=comp160580_c0_seq1.path1;Name=comp160580_c0_seq1;Dir=sensecoverage=98.7;identity=98.9;matches=1520;mismatches=9;indels=8;unknowns=0;locus=RLOC_00005005
ChrX	stalkie_big_nohaplotig	exon	95846447	95846669	100	+	.	Parent=comp160580_c0_seq1.mrna1;Target=comp160580_c0_seq1 22 244 +
ChrX	stalkie_big_nohaplotig	exon	95847235	95847420	100	+	.	Parent=comp160580_c0_seq1.mrna1;Target=comp160580_c0_seq1 245 430 +
ChrX	stalkie_big_nohaplotig	exon	95847540	95847791	100	+	.	Parent=comp160580_c0_seq1.mrna1;Target=comp160580_c0_seq1 431 682 +
ChrX	stalkie_big_nohaplotig	exon	95847867	95848059	94	+	.	Parent=comp160580_c0_seq1.mrna1;Target=comp160580_c0_seq1 683 883 +
ChrX	stalkie_big_nohaplotig	exon	95848121	95848209	95	+	.	Parent=comp160580_c0_seq1.mrna1;Target=comp160580_c0_seq1 884 972 +
ChrX	stalkie_big_nohaplotig	exon	95848284	95848869	99	+	.	Parent=comp160580_c0_seq1.mrna1;Target=comp160580_c0_seq1 973 1558 +
ChrX	stalkie_big_nohaplotig	CDS	95846553	95846669	.	+	0	Parent=comp160580_c0_seq1.mrna1;Target=comp160580_c0_seq1 128 244 +
ChrX	stalkie_big_nohaplotig	CDS	95847235	95847300	.	+	0	Parent=comp160580_c0_seq1.mrna1;Target=comp160580_c0_seq1 245 310 +
ChrX	gffcl	locus	95857738	95858362	.	-	.	ID=RLOC_00005006;geneIDs=comp66546_c0_seq1.path1;transcripts=comp66546_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95857738	95858362	.	-	.	ID=comp66546_c0_seq1.mrna1;geneID=comp66546_c0_seq1.path1;Name=comp66546_c0_seq1;Dir=antisensecoverage=99.8;identity=100.0;matches=571;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005006
ChrX	stalkie_big_nohaplotig	exon	95857738	95858032	100	-	.	Parent=comp66546_c0_seq1.mrna1;Target=comp66546_c0_seq1 1 295 -
ChrX	stalkie_big_nohaplotig	exon	95858087	95858362	100	-	.	Parent=comp66546_c0_seq1.mrna1;Target=comp66546_c0_seq1 296 571 -
ChrX	stalkie_big_nohaplotig	CDS	95857927	95858032	.	-	1	Parent=comp66546_c0_seq1.mrna1;Target=comp66546_c0_seq1 190 295 .
ChrX	stalkie_big_nohaplotig	CDS	95858087	95858136	.	-	0	Parent=comp66546_c0_seq1.mrna1;Target=comp66546_c0_seq1 296 345 .
ChrX	gffcl	locus	95858543	95858590	.	+	.	ID=RLOC_00005007;geneIDs=ORF1360.path1;transcripts=ORF1360.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95858543	95858590	.	+	.	ID=ORF1360.mrna1;geneID=ORF1360.path1;Name=ORF1360;Dir=indeterminatecoverage=4.3;identity=100.0;matches=48;mismatches=0;indels=0;unknowns=0;Target=ORF1360 48 1 .;locus=RLOC_00005007
ChrX	stalkie_big_nohaplotig	exon	95858543	95858590	100	+	.	Parent=ORF1360.mrna1
ChrX	stalkie_big_nohaplotig	CDS	95858543	95858590	.	+	0	Parent=ORF1360.mrna1
ChrX	gffcl	locus	95914200	95914587	.	+	.	ID=RLOC_00005008;geneIDs=comp151410_c2_seq1.path1;transcripts=comp151410_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95914200	95914587	.	+	.	ID=comp151410_c2_seq1.mrna1;geneID=comp151410_c2_seq1.path1;Name=comp151410_c2_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=388;mismatches=0;indels=0;unknowns=0;Target=comp151410_c2_seq1 388 1 .;CDS_Target=comp151410_c2_seq1 301 209 .;locus=RLOC_00005008
ChrX	stalkie_big_nohaplotig	exon	95914200	95914587	100	+	.	Parent=comp151410_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	95914408	95914500	.	+	0	Parent=comp151410_c2_seq1.mrna1
ChrX	gffcl	locus	95915712	95916276	.	-	.	ID=RLOC_00005009;geneIDs=comp146756_c2_seq1.path1;transcripts=comp146756_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95915712	95916276	.	-	.	ID=comp146756_c2_seq1.mrna1;geneID=comp146756_c2_seq1.path1;Name=comp146756_c2_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=565;mismatches=0;indels=0;unknowns=0;Target=comp146756_c2_seq1 565 1 .;CDS_Target=comp146756_c2_seq1 323 225 .;locus=RLOC_00005009
ChrX	stalkie_big_nohaplotig	exon	95915712	95916276	100	-	.	Parent=comp146756_c2_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	95915954	95916052	.	-	0	Parent=comp146756_c2_seq1.mrna1
ChrX	gffcl	locus	95937160	95938043	.	+	.	ID=RLOC_00005010;geneIDs=comp152453_c0_seq1.path1;transcripts=comp152453_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	95937160	95938043	.	+	.	ID=comp152453_c0_seq1.mrna1;geneID=comp152453_c0_seq1.path1;Name=comp152453_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=810;mismatches=2;indels=0;unknowns=0;Target=comp152453_c0_seq1 487 633 .;locus=RLOC_00005010
ChrX	stalkie_big_nohaplotig	exon	95937160	95937182	95	+	.	Parent=comp152453_c0_seq1.mrna1;Target=comp152453_c0_seq1 790 812 -
ChrX	stalkie_big_nohaplotig	exon	95937255	95938043	99	+	.	Parent=comp152453_c0_seq1.mrna1;Target=comp152453_c0_seq1 1 789 -
ChrX	stalkie_big_nohaplotig	CDS	95937411	95937557	.	+	0	Parent=comp152453_c0_seq1.mrna1
ChrX	gffcl	locus	95950022	95950905	.	+	.	ID=RLOC_00005011;geneIDs=comp152453_c0_seq1.path2;transcripts=comp152453_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	95950022	95950905	.	+	.	ID=comp152453_c0_seq1.mrna2;geneID=comp152453_c0_seq1.path2;Name=comp152453_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=810;mismatches=2;indels=0;unknowns=0;Target=comp152453_c0_seq1 487 633 .;locus=RLOC_00005011
ChrX	stalkie_big_nohaplotig	exon	95950022	95950044	95	+	.	Parent=comp152453_c0_seq1.mrna2;Target=comp152453_c0_seq1 790 812 -
ChrX	stalkie_big_nohaplotig	exon	95950117	95950905	99	+	.	Parent=comp152453_c0_seq1.mrna2;Target=comp152453_c0_seq1 1 789 -
ChrX	stalkie_big_nohaplotig	CDS	95950273	95950419	.	+	0	Parent=comp152453_c0_seq1.mrna2
ChrX	gffcl	locus	95956459	95957342	.	+	.	ID=RLOC_00005012;geneIDs=comp152453_c0_seq1.path3;transcripts=comp152453_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	95956459	95957342	.	+	.	ID=comp152453_c0_seq1.mrna3;geneID=comp152453_c0_seq1.path3;Name=comp152453_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=810;mismatches=2;indels=0;unknowns=0;Target=comp152453_c0_seq1 487 633 .;locus=RLOC_00005012
ChrX	stalkie_big_nohaplotig	exon	95956459	95956481	95	+	.	Parent=comp152453_c0_seq1.mrna3;Target=comp152453_c0_seq1 790 812 -
ChrX	stalkie_big_nohaplotig	exon	95956554	95957342	99	+	.	Parent=comp152453_c0_seq1.mrna3;Target=comp152453_c0_seq1 1 789 -
ChrX	stalkie_big_nohaplotig	CDS	95956710	95956856	.	+	0	Parent=comp152453_c0_seq1.mrna3
ChrX	gffcl	locus	95998350	96000434	.	.	.	ID=RLOC_00005013;geneIDs=ORF3203.path2,comp116815_c0_seq1.path2,comp143723_c0_seq1.path2;transcripts=ORF3203.mrna2,comp143723_c0_seq1.mrna2,comp116815_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	95998350	95999864	.	+	.	ID=ORF3203.mrna2;geneID=ORF3203.path2;Name=ORF3203;Dir=sensecoverage=99.5;identity=99.7;matches=750;mismatches=2;indels=0;unknowns=0;Target=ORF3203 70 750 +;locus=RLOC_00005013
ChrX	stalkie_big_nohaplotig	exon	95998350	95998379	100	+	.	Parent=ORF3203.mrna2;Target=ORF3203 1 30 +
ChrX	stalkie_big_nohaplotig	exon	95999143	95999864	99	+	.	Parent=ORF3203.mrna2;Target=ORF3203 31 752 +
ChrX	stalkie_big_nohaplotig	CDS	95999182	95999862	.	+	0	Parent=ORF3203.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	95998356	95999164	.	-	.	ID=comp143723_c0_seq1.mrna2;geneID=comp143723_c0_seq1.path2;Name=comp143723_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=808;mismatches=1;indels=0;unknowns=0;Target=comp143723_c0_seq1 809 1 .;CDS_Target=comp143723_c0_seq1 140 3 .;locus=RLOC_00005013
ChrX	stalkie_big_nohaplotig	exon	95998356	95999164	99	-	.	Parent=comp143723_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	95999025	95999162	.	-	0	Parent=comp143723_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	95999839	96000434	.	+	.	ID=comp116815_c0_seq1.mrna2;geneID=comp116815_c0_seq1.path2;Name=comp116815_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=465;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005013
ChrX	stalkie_big_nohaplotig	exon	95999839	95999862	100	+	.	Parent=comp116815_c0_seq1.mrna2;Target=comp116815_c0_seq1 1 24 +
ChrX	stalkie_big_nohaplotig	exon	95999930	96000070	100	+	.	Parent=comp116815_c0_seq1.mrna2;Target=comp116815_c0_seq1 25 165 +
ChrX	stalkie_big_nohaplotig	exon	96000135	96000434	100	+	.	Parent=comp116815_c0_seq1.mrna2;Target=comp116815_c0_seq1 166 465 +
ChrX	stalkie_big_nohaplotig	CDS	95999839	95999862	.	+	0	Parent=comp116815_c0_seq1.mrna2;Target=comp116815_c0_seq1 1 24 +
ChrX	stalkie_big_nohaplotig	CDS	95999930	95999968	.	+	0	Parent=comp116815_c0_seq1.mrna2;Target=comp116815_c0_seq1 25 63 +
ChrX	gffcl	locus	96049635	96059470	.	.	.	ID=RLOC_00005015;geneIDs=comp48714_c0_seq1.path2,comp162145_c1_seq1.path2;transcripts=comp162145_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	96049795	96059470	.	-	.	ID=comp162145_c1_seq1.mrna2;geneID=comp162145_c1_seq1.path2;Name=comp162145_c1_seq1;Dir=antisensecoverage=98.1;identity=98.3;matches=1427;mismatches=13;indels=11;unknowns=0;locus=RLOC_00005015
ChrX	stalkie_big_nohaplotig	exon	96049795	96050268	97	-	.	Parent=comp162145_c1_seq1.mrna2;Target=comp162145_c1_seq1 16 494 -
ChrX	stalkie_big_nohaplotig	exon	96051044	96051487	99	-	.	Parent=comp162145_c1_seq1.mrna2;Target=comp162145_c1_seq1 495 938 -
ChrX	stalkie_big_nohaplotig	exon	96052337	96052499	96	-	.	Parent=comp162145_c1_seq1.mrna2;Target=comp162145_c1_seq1 939 1095 -
ChrX	stalkie_big_nohaplotig	exon	96058804	96058901	97	-	.	Parent=comp162145_c1_seq1.mrna2;Target=comp162145_c1_seq1 1096 1193 -
ChrX	stalkie_big_nohaplotig	exon	96058961	96058988	100	-	.	Parent=comp162145_c1_seq1.mrna2;Target=comp162145_c1_seq1 1194 1221 -
ChrX	stalkie_big_nohaplotig	exon	96059134	96059175	100	-	.	Parent=comp162145_c1_seq1.mrna2;Target=comp162145_c1_seq1 1222 1263 -
ChrX	stalkie_big_nohaplotig	exon	96059274	96059470	99	-	.	Parent=comp162145_c1_seq1.mrna2;Target=comp162145_c1_seq1 1264 1460 -
ChrX	stalkie_big_nohaplotig	CDS	96058839	96058901	.	-	0	Parent=comp162145_c1_seq1.mrna2;Target=comp162145_c1_seq1 1131 1193 .
ChrX	stalkie_big_nohaplotig	CDS	96058961	96058988	.	-	1	Parent=comp162145_c1_seq1.mrna2;Target=comp162145_c1_seq1 1194 1221 .
ChrX	stalkie_big_nohaplotig	CDS	96059134	96059175	.	-	1	Parent=comp162145_c1_seq1.mrna2;Target=comp162145_c1_seq1 1222 1263 .
ChrX	stalkie_big_nohaplotig	CDS	96059274	96059332	.	-	0	Parent=comp162145_c1_seq1.mrna2;Target=comp162145_c1_seq1 1264 1322 .
ChrX	gffcl	locus	96055951	96056140	.	+	.	ID=RLOC_00005016;geneIDs=comp48714_c0_seq1.path3;transcripts=comp48714_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	96055951	96056140	.	+	.	ID=comp48714_c0_seq1.mrna3;geneID=comp48714_c0_seq1.path3;Name=comp48714_c0_seq1;Dir=indeterminatecoverage=91.8;identity=99.5;matches=189;mismatches=1;indels=0;unknowns=0;Target=comp48714_c0_seq1 207 18 .;CDS_Target=comp48714_c0_seq1 92 18 .;locus=RLOC_00005016
ChrX	stalkie_big_nohaplotig	exon	96055951	96056140	99	+	.	Parent=comp48714_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	CDS	96055951	96056025	.	+	0	Parent=comp48714_c0_seq1.mrna3
ChrX	gffcl	locus	96062126	96063483	.	+	.	ID=RLOC_00005017;geneIDs=comp161193_c0_seq1.path1;transcripts=comp161193_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	96062126	96063483	.	+	.	ID=comp161193_c0_seq1.mrna1;geneID=comp161193_c0_seq1.path1;Name=comp161193_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=1332;mismatches=13;indels=13;unknowns=0;Target=comp161193_c0_seq1 1345 1 .;CDS_Target=comp161193_c0_seq1 1034 3 .;locus=RLOC_00005017
ChrX	stalkie_big_nohaplotig	exon	96062126	96063483	98	+	.	Parent=comp161193_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	96062128	96063172	.	+	0	Parent=comp161193_c0_seq1.mrna1
ChrX	gffcl	locus	96073758	96082613	.	+	.	ID=RLOC_00005018;geneIDs=comp162524_c0_seq1.path1;transcripts=comp162524_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	96073758	96082613	.	+	.	ID=comp162524_c0_seq1.mrna1;geneID=comp162524_c0_seq1.path1;Name=comp162524_c0_seq1;Dir=antisensecoverage=100.0;identity=99.0;matches=1656;mismatches=5;indels=11;unknowns=0;Target=comp162524_c0_seq1 1205 1318 .;locus=RLOC_00005018
ChrX	stalkie_big_nohaplotig	exon	96073758	96073808	100	+	.	Parent=comp162524_c0_seq1.mrna1;Target=comp162524_c0_seq1 1614 1664 -
ChrX	stalkie_big_nohaplotig	exon	96073887	96074130	97	+	.	Parent=comp162524_c0_seq1.mrna1;Target=comp162524_c0_seq1 1367 1613 -
ChrX	stalkie_big_nohaplotig	exon	96074191	96074357	100	+	.	Parent=comp162524_c0_seq1.mrna1;Target=comp162524_c0_seq1 1200 1366 -
ChrX	stalkie_big_nohaplotig	exon	96074426	96074517	98	+	.	Parent=comp162524_c0_seq1.mrna1;Target=comp162524_c0_seq1 1108 1199 -
ChrX	stalkie_big_nohaplotig	exon	96074579	96074846	100	+	.	Parent=comp162524_c0_seq1.mrna1;Target=comp162524_c0_seq1 840 1107 -
ChrX	stalkie_big_nohaplotig	exon	96077043	96077647	99	+	.	Parent=comp162524_c0_seq1.mrna1;Target=comp162524_c0_seq1 235 839 -
ChrX	stalkie_big_nohaplotig	exon	96079773	96079854	89	+	.	Parent=comp162524_c0_seq1.mrna1;Target=comp162524_c0_seq1 161 234 -
ChrX	stalkie_big_nohaplotig	exon	96082325	96082437	100	+	.	Parent=comp162524_c0_seq1.mrna1;Target=comp162524_c0_seq1 48 160 -
ChrX	stalkie_big_nohaplotig	exon	96082567	96082613	100	+	.	Parent=comp162524_c0_seq1.mrna1;Target=comp162524_c0_seq1 1 47 -
ChrX	stalkie_big_nohaplotig	CDS	96074239	96074352	.	+	0	Parent=comp162524_c0_seq1.mrna1
ChrX	gffcl	locus	96177127	96178034	.	-	.	ID=RLOC_00005019;geneIDs=FBgn0262534.1.path4;transcripts=FBgn0262534.1.mrna4
ChrX	stalkie_big_nohaplotig	mRNA	96177127	96178034	.	-	.	ID=FBgn0262534.1.mrna4;geneID=FBgn0262534.1.path4;Name=FBgn0262534.1;Dir=sensecoverage=98.5;identity=98.6;matches=787;mismatches=11;indels=0;unknowns=0;locus=RLOC_00005019
ChrX	stalkie_big_nohaplotig	exon	96177127	96177299	98	-	.	Parent=FBgn0262534.1.mrna4;Target=FBgn0262534.1 626 798 +
ChrX	stalkie_big_nohaplotig	exon	96177353	96177568	99	-	.	Parent=FBgn0262534.1.mrna4;Target=FBgn0262534.1 410 625 +
ChrX	stalkie_big_nohaplotig	exon	96177626	96178034	98	-	.	Parent=FBgn0262534.1.mrna4;Target=FBgn0262534.1 1 409 +
ChrX	stalkie_big_nohaplotig	CDS	96177127	96177299	.	-	2	Parent=FBgn0262534.1.mrna4;Target=FBgn0262534.1 626 798 +
ChrX	stalkie_big_nohaplotig	CDS	96177353	96177568	.	-	2	Parent=FBgn0262534.1.mrna4;Target=FBgn0262534.1 410 625 +
ChrX	stalkie_big_nohaplotig	CDS	96177626	96178034	.	-	0	Parent=FBgn0262534.1.mrna4;Target=FBgn0262534.1 1 409 +
ChrX	gffcl	locus	96240138	96240494	.	+	.	ID=RLOC_00005020;geneIDs=comp144439_c0_seq1.path1;transcripts=comp144439_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	96240138	96240494	.	+	.	ID=comp144439_c0_seq1.mrna1;geneID=comp144439_c0_seq1.path1;Name=comp144439_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.7;matches=356;mismatches=1;indels=0;unknowns=0;Target=comp144439_c0_seq1 357 1 .;CDS_Target=comp144439_c0_seq1 41 3 .;locus=RLOC_00005020
ChrX	stalkie_big_nohaplotig	exon	96240138	96240494	99	+	.	Parent=comp144439_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	96240140	96240178	.	+	0	Parent=comp144439_c0_seq1.mrna1
ChrX	gffcl	locus	96252533	96254004	.	+	.	ID=RLOC_00005021;geneIDs=comp161959_c1_seq1.path2;transcripts=comp161959_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	96252533	96254004	.	+	.	ID=comp161959_c1_seq1.mrna2;geneID=comp161959_c1_seq1.path2;Name=comp161959_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1467;mismatches=5;indels=0;unknowns=0;Target=comp161959_c1_seq1 1472 1 .;CDS_Target=comp161959_c1_seq1 1265 453 .;locus=RLOC_00005021
ChrX	stalkie_big_nohaplotig	exon	96252533	96254004	99	+	.	Parent=comp161959_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	96252985	96253797	.	+	0	Parent=comp161959_c1_seq1.mrna2
ChrX	gffcl	locus	96340418	96340842	.	+	.	ID=RLOC_00005023;geneIDs=comp148797_c0_seq1.path1;transcripts=comp148797_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	96340418	96340842	.	+	.	ID=comp148797_c0_seq1.mrna1;geneID=comp148797_c0_seq1.path1;Name=comp148797_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=421;mismatches=4;indels=0;unknowns=0;Target=comp148797_c0_seq1 425 1 .;CDS_Target=comp148797_c0_seq1 282 172 .;locus=RLOC_00005023
ChrX	stalkie_big_nohaplotig	exon	96340418	96340842	99	+	.	Parent=comp148797_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	96340589	96340699	.	+	0	Parent=comp148797_c0_seq1.mrna1
ChrX	gffcl	locus	96368039	96370516	.	-	.	ID=RLOC_00005025;geneIDs=comp158582_c0_seq1.path1;transcripts=comp158582_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	96368039	96370516	.	-	.	ID=comp158582_c0_seq1.mrna1;geneID=comp158582_c0_seq1.path1;Name=comp158582_c0_seq1;Dir=sensecoverage=98.9;identity=99.2;matches=1582;mismatches=11;indels=2;unknowns=0;locus=RLOC_00005025
ChrX	stalkie_big_nohaplotig	exon	96368039	96368499	99	-	.	Parent=comp158582_c0_seq1.mrna1;Target=comp158582_c0_seq1 1133 1593 +
ChrX	stalkie_big_nohaplotig	exon	96368563	96368941	97	-	.	Parent=comp158582_c0_seq1.mrna1;Target=comp158582_c0_seq1 754 1132 +
ChrX	stalkie_big_nohaplotig	exon	96369762	96370516	99	-	.	Parent=comp158582_c0_seq1.mrna1;Target=comp158582_c0_seq1 1 753 +
ChrX	stalkie_big_nohaplotig	CDS	96368444	96368499	.	-	2	Parent=comp158582_c0_seq1.mrna1;Target=comp158582_c0_seq1 1133 1188 +
ChrX	stalkie_big_nohaplotig	CDS	96368563	96368617	.	-	0	Parent=comp158582_c0_seq1.mrna1;Target=comp158582_c0_seq1 1078 1132 +
ChrX	gffcl	locus	96452575	96452780	.	+	.	ID=RLOC_00005026;geneIDs=comp92943_c0_seq1.path1;transcripts=comp92943_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	96452575	96452780	.	+	.	ID=comp92943_c0_seq1.mrna1;geneID=comp92943_c0_seq1.path1;Name=comp92943_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.5;matches=205;mismatches=1;indels=0;unknowns=0;Target=comp92943_c0_seq1 206 1 .;CDS_Target=comp92943_c0_seq1 95 3 .;locus=RLOC_00005026
ChrX	stalkie_big_nohaplotig	exon	96452575	96452780	99	+	.	Parent=comp92943_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	96452577	96452669	.	+	0	Parent=comp92943_c0_seq1.mrna1
ChrX	gffcl	locus	96800604	96801299	.	+	.	ID=RLOC_00005031;geneIDs=comp163159_c1_seq1.path4;transcripts=comp163159_c1_seq1.mrna4
ChrX	stalkie_big_nohaplotig	mRNA	96800604	96801299	.	+	.	ID=comp163159_c1_seq1.mrna4;geneID=comp163159_c1_seq1.path4;Name=comp163159_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=678;mismatches=18;indels=0;unknowns=0;Target=comp163159_c1_seq1 696 1 .;locus=RLOC_00005031
ChrX	stalkie_big_nohaplotig	exon	96800604	96801299	97	+	.	Parent=comp163159_c1_seq1.mrna4
ChrX	stalkie_big_nohaplotig	CDS	96800604	96801299	.	+	0	Parent=comp163159_c1_seq1.mrna4
ChrX	gffcl	locus	96802975	96803539	.	+	.	ID=RLOC_00005032;geneIDs=comp146756_c2_seq1.path2;transcripts=comp146756_c2_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	96802975	96803539	.	+	.	ID=comp146756_c2_seq1.mrna2;geneID=comp146756_c2_seq1.path2;Name=comp146756_c2_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=565;mismatches=0;indels=0;unknowns=0;Target=comp146756_c2_seq1 565 1 .;CDS_Target=comp146756_c2_seq1 323 225 .;locus=RLOC_00005032
ChrX	stalkie_big_nohaplotig	exon	96802975	96803539	100	+	.	Parent=comp146756_c2_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	96803199	96803297	.	+	0	Parent=comp146756_c2_seq1.mrna2
ChrX	gffcl	locus	96804664	96805051	.	-	.	ID=RLOC_00005033;geneIDs=comp151410_c2_seq1.path2;transcripts=comp151410_c2_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	96804664	96805051	.	-	.	ID=comp151410_c2_seq1.mrna2;geneID=comp151410_c2_seq1.path2;Name=comp151410_c2_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=388;mismatches=0;indels=0;unknowns=0;Target=comp151410_c2_seq1 388 1 .;CDS_Target=comp151410_c2_seq1 301 209 .;locus=RLOC_00005033
ChrX	stalkie_big_nohaplotig	exon	96804664	96805051	100	-	.	Parent=comp151410_c2_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	96804751	96804843	.	-	0	Parent=comp151410_c2_seq1.mrna2
ChrX	gffcl	locus	96805388	96805587	.	+	.	ID=RLOC_00005034;geneIDs=comp148496_c0_seq1.path3;transcripts=comp148496_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	96805388	96805587	.	+	.	ID=comp148496_c0_seq1.mrna3;geneID=comp148496_c0_seq1.path3;Name=comp148496_c0_seq1;Dir=indeterminatecoverage=91.8;identity=73.2;matches=188;mismatches=11;indels=58;unknowns=0;Target=comp148496_c0_seq1 256 1 .;CDS_Target=comp148496_c0_seq1 64 56 .;locus=RLOC_00005034
ChrX	stalkie_big_nohaplotig	exon	96805388	96805587	73	+	.	Parent=comp148496_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	CDS	96805443	96805449	.	+	0	Parent=comp148496_c0_seq1.mrna3
ChrX	gffcl	locus	96810265	96856006	.	.	.	ID=RLOC_00005035;geneIDs=comp160817_c0_seq1.path1,comp161180_c0_seq1.path2;transcripts=comp160817_c0_seq1.mrna1,comp161180_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	96810265	96856006	.	-	.	ID=comp160817_c0_seq1.mrna1;geneID=comp160817_c0_seq1.path1;Name=comp160817_c0_seq1;Dir=indeterminatecoverage=96.9;identity=99.6;matches=1362;mismatches=4;indels=2;unknowns=0;locus=RLOC_00005035
ChrX	stalkie_big_nohaplotig	exon	96810265	96810876	100	-	.	Parent=comp160817_c0_seq1.mrna1;Target=comp160817_c0_seq1 1412 801 .
ChrX	stalkie_big_nohaplotig	exon	96814447	96814552	99	-	.	Parent=comp160817_c0_seq1.mrna1;Target=comp160817_c0_seq1 800 695 .
ChrX	stalkie_big_nohaplotig	exon	96843182	96843552	100	-	.	Parent=comp160817_c0_seq1.mrna1;Target=comp160817_c0_seq1 694 324 .
ChrX	stalkie_big_nohaplotig	exon	96855730	96856006	98	-	.	Parent=comp160817_c0_seq1.mrna1;Target=comp160817_c0_seq1 323 45 .
ChrX	stalkie_big_nohaplotig	CDS	96810620	96810876	.	-	2	Parent=comp160817_c0_seq1.mrna1;Target=comp160817_c0_seq1 1057 801 .
ChrX	stalkie_big_nohaplotig	CDS	96814447	96814552	.	-	0	Parent=comp160817_c0_seq1.mrna1;Target=comp160817_c0_seq1 800 695 .
ChrX	stalkie_big_nohaplotig	CDS	96843182	96843472	.	-	0	Parent=comp160817_c0_seq1.mrna1;Target=comp160817_c0_seq1 694 404 .
ChrX	stalkie_big_nohaplotig	mRNA	96854931	96855752	.	+	.	ID=comp161180_c0_seq1.mrna2;geneID=comp161180_c0_seq1.path2;Name=comp161180_c0_seq1;Dir=indeterminatecoverage=98.2;identity=97.4;matches=801;mismatches=21;indels=0;unknowns=0;Target=comp161180_c0_seq1 822 1 .;CDS_Target=comp161180_c0_seq1 133 2 .;locus=RLOC_00005035
ChrX	stalkie_big_nohaplotig	exon	96854931	96855752	97	+	.	Parent=comp161180_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	96854932	96855063	.	+	0	Parent=comp161180_c0_seq1.mrna2
ChrX	gffcl	locus	96825085	96825284	.	+	.	ID=RLOC_00005036;geneIDs=comp148496_c0_seq1.path6;transcripts=comp148496_c0_seq1.mrna6
ChrX	stalkie_big_nohaplotig	mRNA	96825085	96825284	.	+	.	ID=comp148496_c0_seq1.mrna6;geneID=comp148496_c0_seq1.path6;Name=comp148496_c0_seq1;Dir=indeterminatecoverage=91.8;identity=72.8;matches=187;mismatches=12;indels=58;unknowns=0;Target=comp148496_c0_seq1 256 1 .;CDS_Target=comp148496_c0_seq1 64 56 .;locus=RLOC_00005036
ChrX	stalkie_big_nohaplotig	exon	96825085	96825284	72	+	.	Parent=comp148496_c0_seq1.mrna6
ChrX	stalkie_big_nohaplotig	CDS	96825140	96825146	.	+	0	Parent=comp148496_c0_seq1.mrna6
ChrX	gffcl	locus	96834285	96835245	.	-	.	ID=RLOC_00005037;geneIDs=comp161842_c0_seq1.path1;transcripts=comp161842_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	96834285	96835245	.	-	.	ID=comp161842_c0_seq1.mrna1;geneID=comp161842_c0_seq1.path1;Name=comp161842_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=947;mismatches=6;indels=18;unknowns=0;Target=comp161842_c0_seq1 963 1 .;CDS_Target=comp161842_c0_seq1 89 3 .;locus=RLOC_00005037
ChrX	stalkie_big_nohaplotig	exon	96834285	96835245	97	-	.	Parent=comp161842_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	96835149	96835243	.	-	0	Parent=comp161842_c0_seq1.mrna1
ChrX	gffcl	locus	96857352	96858643	.	-	.	ID=RLOC_00005038;geneIDs=comp152781_c1_seq1.path2;transcripts=comp152781_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	96857352	96858643	.	-	.	ID=comp152781_c1_seq1.mrna2;geneID=comp152781_c1_seq1.path2;Name=comp152781_c1_seq1;Dir=antisensecoverage=99.9;identity=99.5;matches=819;mismatches=3;indels=1;unknowns=0;Target=comp152781_c1_seq1 691 822 .;locus=RLOC_00005038
ChrX	stalkie_big_nohaplotig	exon	96857352	96857835	99	-	.	Parent=comp152781_c1_seq1.mrna2;Target=comp152781_c1_seq1 1 485 -
ChrX	stalkie_big_nohaplotig	exon	96858306	96858643	100	-	.	Parent=comp152781_c1_seq1.mrna2;Target=comp152781_c1_seq1 486 823 -
ChrX	stalkie_big_nohaplotig	CDS	96858511	96858642	.	-	0	Parent=comp152781_c1_seq1.mrna2
ChrX	gffcl	locus	96906560	96906817	.	+	.	ID=RLOC_00005039;geneIDs=FBgn0053870.path1;transcripts=FBgn0053870.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	96906560	96906817	.	+	.	ID=FBgn0053870.mrna1;geneID=FBgn0053870.path1;Name=FBgn0053870;Dir=indeterminatecoverage=100.0;identity=100.0;matches=258;mismatches=0;indels=0;unknowns=0;Target=FBgn0053870 258 1 .;locus=RLOC_00005039
ChrX	stalkie_big_nohaplotig	exon	96906560	96906817	100	+	.	Parent=FBgn0053870.mrna1
ChrX	stalkie_big_nohaplotig	CDS	96906560	96906817	.	+	0	Parent=FBgn0053870.mrna1
ChrX	gffcl	locus	96980166	96986680	.	+	.	ID=RLOC_00005040;geneIDs=comp148988_c0_seq1.path1;transcripts=comp148988_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	96980166	96986680	.	+	.	ID=comp148988_c0_seq1.mrna1;geneID=comp148988_c0_seq1.path1;Name=comp148988_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=667;mismatches=7;indels=0;unknowns=0;locus=RLOC_00005040
ChrX	stalkie_big_nohaplotig	exon	96980166	96980403	98	+	.	Parent=comp148988_c0_seq1.mrna1;Target=comp148988_c0_seq1 238 1 .
ChrX	stalkie_big_nohaplotig	exon	96983659	96983841	99	+	.	Parent=comp148988_c0_seq1.mrna1;Target=comp148988_c0_seq1 421 239 .
ChrX	stalkie_big_nohaplotig	exon	96985126	96985212	98	+	.	Parent=comp148988_c0_seq1.mrna1;Target=comp148988_c0_seq1 508 422 .
ChrX	stalkie_big_nohaplotig	exon	96985851	96985940	98	+	.	Parent=comp148988_c0_seq1.mrna1;Target=comp148988_c0_seq1 598 509 .
ChrX	stalkie_big_nohaplotig	exon	96986605	96986680	98	+	.	Parent=comp148988_c0_seq1.mrna1;Target=comp148988_c0_seq1 674 599 .
ChrX	stalkie_big_nohaplotig	CDS	96980365	96980403	.	+	0	Parent=comp148988_c0_seq1.mrna1;Target=comp148988_c0_seq1 238 200 .
ChrX	stalkie_big_nohaplotig	CDS	96983659	96983733	.	+	0	Parent=comp148988_c0_seq1.mrna1;Target=comp148988_c0_seq1 313 239 .
ChrX	gffcl	locus	96988979	96989217	.	+	.	ID=RLOC_00005041;geneIDs=comp346636_c0_seq1.path1;transcripts=comp346636_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	96988979	96989217	.	+	.	ID=comp346636_c0_seq1.mrna1;geneID=comp346636_c0_seq1.path1;Name=comp346636_c0_seq1;Dir=indeterminatecoverage=93.7;identity=97.5;matches=233;mismatches=6;indels=0;unknowns=0;Target=comp346636_c0_seq1 255 17 .;CDS_Target=comp346636_c0_seq1 138 19 .;locus=RLOC_00005041
ChrX	stalkie_big_nohaplotig	exon	96988979	96989217	97	+	.	Parent=comp346636_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	96988981	96989100	.	+	0	Parent=comp346636_c0_seq1.mrna1
ChrX	gffcl	locus	96992594	96993852	.	+	.	ID=RLOC_00005042;geneIDs=comp134767_c1_seq1.path2,comp1592474_c0_seq1.path1;transcripts=comp134767_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	96992594	96993852	.	+	.	ID=comp134767_c1_seq1.mrna2;geneID=comp134767_c1_seq1.path2;Name=comp134767_c1_seq1;Dir=indeterminatecoverage=96.6;identity=89.7;matches=1182;mismatches=77;indels=58;unknowns=0;Target=comp134767_c1_seq1 1334 18 .;CDS_Target=comp134767_c1_seq1 390 316 .;locus=RLOC_00005042
ChrX	stalkie_big_nohaplotig	exon	96992594	96993852	89	+	.	Parent=comp134767_c1_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	96992856	96992930	.	+	0	Parent=comp134767_c1_seq1.mrna2
ChrX	gffcl	locus	96996292	96996777	.	-	.	ID=RLOC_00005043;geneIDs=comp135892_c0_seq1.path4;transcripts=comp135892_c0_seq1.mrna4
ChrX	stalkie_big_nohaplotig	mRNA	96996292	96996777	.	-	.	ID=comp135892_c0_seq1.mrna4;geneID=comp135892_c0_seq1.path4;Name=comp135892_c0_seq1;Dir=indeterminatecoverage=99.8;identity=93.8;matches=456;mismatches=27;indels=3;unknowns=0;Target=comp135892_c0_seq1 483 1 .;CDS_Target=comp135892_c0_seq1 306 136 .;locus=RLOC_00005043
ChrX	stalkie_big_nohaplotig	exon	96996292	96996777	93	-	.	Parent=comp135892_c0_seq1.mrna4
ChrX	stalkie_big_nohaplotig	CDS	96996471	96996641	.	-	0	Parent=comp135892_c0_seq1.mrna4
ChrX	gffcl	locus	97072875	97074330	.	-	.	ID=RLOC_00005044;geneIDs=comp159426_c0_seq1.path2;transcripts=comp159426_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	97072875	97074330	.	-	.	ID=comp159426_c0_seq1.mrna2;geneID=comp159426_c0_seq1.path2;Name=comp159426_c0_seq1;Dir=indeterminatecoverage=71.8;identity=99.0;matches=1441;mismatches=14;indels=1;unknowns=0;Target=comp159426_c0_seq1 2027 573 .;CDS_Target=comp159426_c0_seq1 2027 1281 .;locus=RLOC_00005044
ChrX	stalkie_big_nohaplotig	exon	97072875	97074330	98	-	.	Parent=comp159426_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	CDS	97072875	97073621	.	-	0	Parent=comp159426_c0_seq1.mrna2
ChrX	gffcl	locus	97098832	97099066	.	-	.	ID=RLOC_00005045;geneIDs=comp123581_c0_seq1.path4;transcripts=comp123581_c0_seq1.mrna4
ChrX	stalkie_big_nohaplotig	mRNA	97098832	97099066	.	-	.	ID=comp123581_c0_seq1.mrna4;geneID=comp123581_c0_seq1.path4;Name=comp123581_c0_seq1;Dir=indeterminatecoverage=99.2;identity=93.2;matches=219;mismatches=16;indels=0;unknowns=0;Target=comp123581_c0_seq1 235 1 .;CDS_Target=comp123581_c0_seq1 235 164 .;locus=RLOC_00005045
ChrX	stalkie_big_nohaplotig	exon	97098832	97099066	93	-	.	Parent=comp123581_c0_seq1.mrna4
ChrX	stalkie_big_nohaplotig	CDS	97098832	97098903	.	-	0	Parent=comp123581_c0_seq1.mrna4
ChrX	gffcl	locus	97221568	97221775	.	-	.	ID=RLOC_00005047;geneIDs=comp36261_c0_seq1.path3;transcripts=comp36261_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	mRNA	97221568	97221775	.	-	.	ID=comp36261_c0_seq1.mrna3;geneID=comp36261_c0_seq1.path3;Name=comp36261_c0_seq1;Dir=indeterminatecoverage=100.0;identity=78.2;matches=169;mismatches=31;indels=16;unknowns=0;Target=comp36261_c0_seq1 208 1 .;CDS_Target=comp36261_c0_seq1 36 1 .;locus=RLOC_00005047
ChrX	stalkie_big_nohaplotig	exon	97221568	97221775	78	-	.	Parent=comp36261_c0_seq1.mrna3
ChrX	stalkie_big_nohaplotig	CDS	97221740	97221775	.	-	0	Parent=comp36261_c0_seq1.mrna3
ChrX	gffcl	locus	97221911	97227177	.	+	.	ID=RLOC_00005048;geneIDs=comp165654_c1_seq1.path1;transcripts=comp165654_c1_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	97221911	97227177	.	+	.	ID=comp165654_c1_seq1.mrna1;geneID=comp165654_c1_seq1.path1;Name=comp165654_c1_seq1;Dir=indeterminatecoverage=99.8;identity=97.1;matches=433;mismatches=11;indels=2;unknowns=0;Target=comp165654_c1_seq1 297 208 .;locus=RLOC_00005048
ChrX	stalkie_big_nohaplotig	exon	97221911	97222075	96	+	.	Parent=comp165654_c1_seq1.mrna1;Target=comp165654_c1_seq1 164 1 .
ChrX	stalkie_big_nohaplotig	exon	97226898	97227177	97	+	.	Parent=comp165654_c1_seq1.mrna1;Target=comp165654_c1_seq1 445 165 .
ChrX	stalkie_big_nohaplotig	CDS	97226941	97227029	.	+	0	Parent=comp165654_c1_seq1.mrna1
ChrX	gffcl	locus	97238894	97239442	.	+	.	ID=RLOC_00005050;geneIDs=comp154952_c0_seq1.path1;transcripts=comp154952_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	97238894	97239442	.	+	.	ID=comp154952_c0_seq1.mrna1;geneID=comp154952_c0_seq1.path1;Name=comp154952_c0_seq1;Dir=indeterminatecoverage=92.7;identity=99.5;matches=546;mismatches=3;indels=0;unknowns=0;Target=comp154952_c0_seq1 567 19 .;CDS_Target=comp154952_c0_seq1 497 390 .;locus=RLOC_00005050
ChrX	stalkie_big_nohaplotig	exon	97238894	97239442	99	+	.	Parent=comp154952_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	CDS	97239265	97239372	.	+	0	Parent=comp154952_c0_seq1.mrna1
ChrX	gffcl	locus	97272359	97277071	.	-	.	ID=RLOC_00005051;geneIDs=comp157642_c0_seq1.path1;transcripts=comp157642_c0_seq1.mrna1
ChrX	stalkie_big_nohaplotig	mRNA	97272359	97277071	.	-	.	ID=comp157642_c0_seq1.mrna1;geneID=comp157642_c0_seq1.path1;Name=comp157642_c0_seq1;Dir=antisensecoverage=99.9;identity=97.7;matches=1021;mismatches=7;indels=17;unknowns=0;locus=RLOC_00005051
ChrX	stalkie_big_nohaplotig	exon	97272359	97272576	100	-	.	Parent=comp157642_c0_seq1.mrna1;Target=comp157642_c0_seq1 2 219 -
ChrX	stalkie_big_nohaplotig	exon	97272655	97272926	96	-	.	Parent=comp157642_c0_seq1.mrna1;Target=comp157642_c0_seq1 220 496 -
ChrX	stalkie_big_nohaplotig	exon	97272989	97273213	97	-	.	Parent=comp157642_c0_seq1.mrna1;Target=comp157642_c0_seq1 497 724 -
ChrX	stalkie_big_nohaplotig	exon	97276750	97277071	97	-	.	Parent=comp157642_c0_seq1.mrna1;Target=comp157642_c0_seq1 725 1037 -
ChrX	stalkie_big_nohaplotig	CDS	97273017	97273213	.	-	2	Parent=comp157642_c0_seq1.mrna1;Target=comp157642_c0_seq1 528 724 .
ChrX	stalkie_big_nohaplotig	CDS	97276750	97276912	.	-	0	Parent=comp157642_c0_seq1.mrna1;Target=comp157642_c0_seq1 725 878 .
Chr1	gffcl	locus	3545	4751	.	-	.	ID=RLOC_00005052;geneIDs=comp155604_c0_seq1.path1;transcripts=comp155604_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3545	4751	.	-	.	ID=comp155604_c0_seq1.mrna1;geneID=comp155604_c0_seq1.path1;Name=comp155604_c0_seq1;Dir=sensecoverage=99.8;identity=97.2;matches=1085;mismatches=21;indels=10;unknowns=0;Target=comp155604_c0_seq1 2 103 +;locus=RLOC_00005052
Chr1	stalkie_big_nohaplotig	exon	3545	4244	96	-	.	Parent=comp155604_c0_seq1.mrna1;Target=comp155604_c0_seq1 414 1107 +
Chr1	stalkie_big_nohaplotig	exon	4337	4751	97	-	.	Parent=comp155604_c0_seq1.mrna1;Target=comp155604_c0_seq1 1 413 +
Chr1	stalkie_big_nohaplotig	CDS	4649	4750	.	-	0	Parent=comp155604_c0_seq1.mrna1
Chr1	gffcl	locus	62690	63807	.	-	.	ID=RLOC_00005053;geneIDs=comp152561_c0_seq1.path1;transcripts=comp152561_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	62690	63807	.	-	.	ID=comp152561_c0_seq1.mrna1;geneID=comp152561_c0_seq1.path1;Name=comp152561_c0_seq1;Dir=indeterminatecoverage=98.7;identity=99.6;matches=1114;mismatches=4;indels=0;unknowns=0;Target=comp152561_c0_seq1 1124 7 .;CDS_Target=comp152561_c0_seq1 890 711 .;locus=RLOC_00005053
Chr1	stalkie_big_nohaplotig	exon	62690	63807	99	-	.	Parent=comp152561_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	62924	63103	.	-	0	Parent=comp152561_c0_seq1.mrna1
Chr1	gffcl	locus	73993	1743080	.	+	.	ID=RLOC_00005054;geneIDs=comp158349_c8_seq1.path1;transcripts=comp158349_c8_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	73993	1743080	.	+	.	ID=comp158349_c8_seq1.mrna1;geneID=comp158349_c8_seq1.path1;Name=comp158349_c8_seq1;Dir=indeterminatecoverage=96.7;identity=96.1;matches=1396;mismatches=17;indels=39;unknowns=0;Target=comp158349_c8_seq1 1095 1042 .;locus=RLOC_00005054
Chr1	stalkie_big_nohaplotig	exon	73993	74492	100	+	.	Parent=comp158349_c8_seq1.mrna1;Target=comp158349_c8_seq1 500 1 .
Chr1	stalkie_big_nohaplotig	exon	90327	91211	93	+	.	Parent=comp158349_c8_seq1.mrna1;Target=comp158349_c8_seq1 1418 501 .
Chr1	stalkie_big_nohaplotig	exon	1739199	1739206	100	+	.	Parent=comp158349_c8_seq1.mrna1;Target=comp158349_c8_seq1 1426 1419 .
Chr1	stalkie_big_nohaplotig	exon	1740227	1740234	100	+	.	Parent=comp158349_c8_seq1.mrna1;Target=comp158349_c8_seq1 1434 1427 .
Chr1	stalkie_big_nohaplotig	exon	1740238	1740243	100	+	.	Parent=comp158349_c8_seq1.mrna1;Target=comp158349_c8_seq1 1468 1463 .
Chr1	stalkie_big_nohaplotig	exon	1742174	1742180	100	+	.	Parent=comp158349_c8_seq1.mrna1;Target=comp158349_c8_seq1 1475 1469 .
Chr1	stalkie_big_nohaplotig	exon	1743079	1743080	100	+	.	Parent=comp158349_c8_seq1.mrna1;Target=comp158349_c8_seq1 1477 1476 .
Chr1	stalkie_big_nohaplotig	CDS	90867	90921	.	+	0	Parent=comp158349_c8_seq1.mrna1
Chr1	gffcl	locus	79878	80676	.	+	.	ID=RLOC_00005055;geneIDs=comp159389_c4_seq1.path1;transcripts=comp159389_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	79878	80676	.	+	.	ID=comp159389_c4_seq1.mrna1;geneID=comp159389_c4_seq1.path1;Name=comp159389_c4_seq1;Dir=indeterminatecoverage=39.8;identity=100.0;matches=799;mismatches=0;indels=0;unknowns=0;Target=comp159389_c4_seq1 1337 539 .;CDS_Target=comp159389_c4_seq1 1161 1066 .;locus=RLOC_00005055
Chr1	stalkie_big_nohaplotig	exon	79878	80676	100	+	.	Parent=comp159389_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	80405	80500	.	+	0	Parent=comp159389_c4_seq1.mrna1
Chr1	gffcl	locus	85285	86930	.	-	.	ID=RLOC_00005056;geneIDs=ORF550.path1;transcripts=ORF550.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	85285	86930	.	-	.	ID=ORF550.mrna1;geneID=ORF550.path1;Name=ORF550;Dir=indeterminatecoverage=99.0;identity=99.3;matches=1634;mismatches=12;indels=0;unknowns=0;Target=ORF550 1662 17 .;CDS_Target=ORF550 1662 19 .;locus=RLOC_00005056
Chr1	stalkie_big_nohaplotig	exon	85285	86930	99	-	.	Parent=ORF550.mrna1
Chr1	stalkie_big_nohaplotig	CDS	85285	86928	.	-	0	Parent=ORF550.mrna1
Chr1	gffcl	locus	92309	1803492	.	+	.	ID=RLOC_00005057;geneIDs=comp162738_c0_seq1.path1;transcripts=comp162738_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	92309	1803492	.	+	.	ID=comp162738_c0_seq1.mrna1;geneID=comp162738_c0_seq1.path1;Name=comp162738_c0_seq1;Dir=indeterminatecoverage=93.1;identity=97.8;matches=623;mismatches=11;indels=3;unknowns=0;Target=comp162738_c0_seq1 167 12 .;locus=RLOC_00005057
Chr1	stalkie_big_nohaplotig	exon	92309	92937	97	+	.	Parent=comp162738_c0_seq1.mrna1;Target=comp162738_c0_seq1 642 11 .
Chr1	stalkie_big_nohaplotig	exon	1803489	1803492	100	+	.	Parent=comp162738_c0_seq1.mrna1;Target=comp162738_c0_seq1 647 644 .
Chr1	stalkie_big_nohaplotig	CDS	92310	92465	.	+	0	Parent=comp162738_c0_seq1.mrna1
Chr1	gffcl	locus	95314	96959	.	-	.	ID=RLOC_00005058;geneIDs=ORF550.path2;transcripts=ORF550.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	95314	96959	.	-	.	ID=ORF550.mrna2;geneID=ORF550.path2;Name=ORF550;Dir=indeterminatecoverage=99.0;identity=99.3;matches=1634;mismatches=12;indels=0;unknowns=0;Target=ORF550 1662 17 .;CDS_Target=ORF550 1662 19 .;locus=RLOC_00005058
Chr1	stalkie_big_nohaplotig	exon	95314	96959	99	-	.	Parent=ORF550.mrna2
Chr1	stalkie_big_nohaplotig	CDS	95314	96957	.	-	0	Parent=ORF550.mrna2
Chr1	gffcl	locus	148434	539510	.	+	.	ID=RLOC_00005059;geneIDs=comp156443_c0_seq1.path1;transcripts=comp156443_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148434	539510	.	+	.	ID=comp156443_c0_seq1.mrna1;geneID=comp156443_c0_seq1.path1;Name=comp156443_c0_seq1;Dir=antisensecoverage=12.1;identity=89.6;matches=180;mismatches=15;indels=6;unknowns=0;locus=RLOC_00005059
Chr1	stalkie_big_nohaplotig	exon	148434	148576	93	+	.	Parent=comp156443_c0_seq1.mrna1;Target=comp156443_c0_seq1 72 214 -
Chr1	stalkie_big_nohaplotig	exon	539457	539510	79	+	.	Parent=comp156443_c0_seq1.mrna1;Target=comp156443_c0_seq1 16 71 -
Chr1	gffcl	locus	161212	180760	.	+	.	ID=RLOC_00005060;geneIDs=comp163603_c2_seq1.path1;transcripts=comp163603_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161212	180760	.	+	.	ID=comp163603_c2_seq1.mrna1;geneID=comp163603_c2_seq1.path1;Name=comp163603_c2_seq1;Dir=indeterminatecoverage=72.5;identity=93.7;matches=2275;mismatches=93;indels=59;unknowns=0;Target=comp163603_c2_seq1 2837 2796 .;locus=RLOC_00005060
Chr1	stalkie_big_nohaplotig	exon	161212	161220	100	+	.	Parent=comp163603_c2_seq1.mrna1;Target=comp163603_c2_seq1 931 923 .
Chr1	stalkie_big_nohaplotig	exon	173690	173699	100	+	.	Parent=comp163603_c2_seq1.mrna1;Target=comp163603_c2_seq1 955 946 .
Chr1	stalkie_big_nohaplotig	exon	178395	180760	93	+	.	Parent=comp163603_c2_seq1.mrna1;Target=comp163603_c2_seq1 3356 966 .
Chr1	stalkie_big_nohaplotig	CDS	180210	180244	.	+	0	Parent=comp163603_c2_seq1.mrna1
Chr1	gffcl	locus	186789	189883	.	+	.	ID=RLOC_00005062;geneIDs=comp162822_c0_seq1.path1;transcripts=comp162822_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	186789	189883	.	+	.	ID=comp162822_c0_seq1.mrna1;geneID=comp162822_c0_seq1.path1;Name=comp162822_c0_seq1;Dir=sensecoverage=76.6;identity=94.9;matches=2534;mismatches=67;indels=70;unknowns=0;locus=RLOC_00005062
Chr1	stalkie_big_nohaplotig	exon	186789	187137	100	+	.	Parent=comp162822_c0_seq1.mrna1;Target=comp162822_c0_seq1 2 350 +
Chr1	stalkie_big_nohaplotig	exon	187191	187505	94	+	.	Parent=comp162822_c0_seq1.mrna1;Target=comp162822_c0_seq1 351 676 +
Chr1	stalkie_big_nohaplotig	exon	187598	188308	99	+	.	Parent=comp162822_c0_seq1.mrna1;Target=comp162822_c0_seq1 677 1389 +
Chr1	stalkie_big_nohaplotig	exon	188455	189042	93	+	.	Parent=comp162822_c0_seq1.mrna1;Target=comp162822_c0_seq1 1390 1983 +
Chr1	stalkie_big_nohaplotig	exon	189229	189883	88	+	.	Parent=comp162822_c0_seq1.mrna1;Target=comp162822_c0_seq1 1984 2655 +
Chr1	stalkie_big_nohaplotig	CDS	188246	188308	.	+	0	Parent=comp162822_c0_seq1.mrna1;Target=comp162822_c0_seq1 1327 1389 +
Chr1	stalkie_big_nohaplotig	CDS	188455	188532	.	+	0	Parent=comp162822_c0_seq1.mrna1;Target=comp162822_c0_seq1 1390 1467 +
Chr1	gffcl	locus	193185	194258	.	-	.	ID=RLOC_00005063;geneIDs=CPIJ019037.1.path1;transcripts=CPIJ019037.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	193185	194258	.	-	.	ID=CPIJ019037.1.mrna1;geneID=CPIJ019037.1.path1;Name=CPIJ019037.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1073;mismatches=1;indels=0;unknowns=0;Target=CPIJ019037.1 1074 1 .;locus=RLOC_00005063
Chr1	stalkie_big_nohaplotig	exon	193185	194258	99	-	.	Parent=CPIJ019037.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	193185	194258	.	-	0	Parent=CPIJ019037.1.mrna1
Chr1	gffcl	locus	200291	202226	.	+	.	ID=RLOC_00005064;geneIDs=comp155679_c7_seq1.path1;transcripts=comp155679_c7_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	200291	202226	.	+	.	ID=comp155679_c7_seq1.mrna1;geneID=comp155679_c7_seq1.path1;Name=comp155679_c7_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1934;mismatches=2;indels=0;unknowns=0;Target=comp155679_c7_seq1 1936 1 .;CDS_Target=comp155679_c7_seq1 1278 1 .;locus=RLOC_00005064
Chr1	stalkie_big_nohaplotig	exon	200291	202226	99	+	.	Parent=comp155679_c7_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	200291	201568	.	+	0	Parent=comp155679_c7_seq1.mrna1
Chr1	gffcl	locus	209660	211579	.	-	.	ID=RLOC_00005065;geneIDs=comp160393_c3_seq1.path1;transcripts=comp160393_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	209660	211579	.	-	.	ID=comp160393_c3_seq1.mrna1;geneID=comp160393_c3_seq1.path1;Name=comp160393_c3_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=1831;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005065
Chr1	stalkie_big_nohaplotig	exon	209660	210639	99	-	.	Parent=comp160393_c3_seq1.mrna1;Target=comp160393_c3_seq1 1 980 -
Chr1	stalkie_big_nohaplotig	exon	210727	211579	99	-	.	Parent=comp160393_c3_seq1.mrna1;Target=comp160393_c3_seq1 981 1833 -
Chr1	stalkie_big_nohaplotig	CDS	210452	210639	.	-	2	Parent=comp160393_c3_seq1.mrna1;Target=comp160393_c3_seq1 793 980 .
Chr1	stalkie_big_nohaplotig	CDS	210727	211060	.	-	0	Parent=comp160393_c3_seq1.mrna1;Target=comp160393_c3_seq1 981 1314 .
Chr1	gffcl	locus	237560	238305	.	+	.	ID=RLOC_00005066;geneIDs=comp157242_c0_seq1.path1;transcripts=comp157242_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	237560	238305	.	+	.	ID=comp157242_c0_seq1.mrna1;geneID=comp157242_c0_seq1.path1;Name=comp157242_c0_seq1;Dir=indeterminatecoverage=97.8;identity=99.3;matches=743;mismatches=3;indels=2;unknowns=0;Target=comp157242_c0_seq1 765 18 .;CDS_Target=comp157242_c0_seq1 113 18 .;locus=RLOC_00005066
Chr1	stalkie_big_nohaplotig	exon	237560	238305	99	+	.	Parent=comp157242_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	237560	237653	.	+	0	Parent=comp157242_c0_seq1.mrna1
Chr1	gffcl	locus	240201	245730	.	+	.	ID=RLOC_00005067;geneIDs=comp162040_c1_seq1.path1;transcripts=comp162040_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	240201	245730	.	+	.	ID=comp162040_c1_seq1.mrna1;geneID=comp162040_c1_seq1.path1;Name=comp162040_c1_seq1;Dir=indeterminatecoverage=53.1;identity=99.3;matches=974;mismatches=7;indels=0;unknowns=0;Target=comp162040_c1_seq1 1799 1512 .;locus=RLOC_00005067
Chr1	stalkie_big_nohaplotig	exon	240201	240209	100	+	.	Parent=comp162040_c1_seq1.mrna1;Target=comp162040_c1_seq1 833 825 .
Chr1	stalkie_big_nohaplotig	exon	244760	245730	99	+	.	Parent=comp162040_c1_seq1.mrna1;Target=comp162040_c1_seq1 1840 870 .
Chr1	stalkie_big_nohaplotig	CDS	245402	245689	.	+	0	Parent=comp162040_c1_seq1.mrna1
Chr1	gffcl	locus	244693	270295	.	-	.	ID=RLOC_00005068;geneIDs=comp161789_c1_seq1.path1;transcripts=comp161789_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	244693	270295	.	-	.	ID=comp161789_c1_seq1.mrna1;geneID=comp161789_c1_seq1.path1;Name=comp161789_c1_seq1;Dir=indeterminatecoverage=70.5;identity=96.7;matches=1472;mismatches=21;indels=30;unknowns=0;Target=comp161789_c1_seq1 1078 797 .;locus=RLOC_00005068
Chr1	stalkie_big_nohaplotig	exon	244693	244698	100	-	.	Parent=comp161789_c1_seq1.mrna1;Target=comp161789_c1_seq1 1557 1552 .
Chr1	stalkie_big_nohaplotig	exon	245897	246868	99	-	.	Parent=comp161789_c1_seq1.mrna1;Target=comp161789_c1_seq1 1551 580 .
Chr1	stalkie_big_nohaplotig	exon	269781	270295	92	-	.	Parent=comp161789_c1_seq1.mrna1;Target=comp161789_c1_seq1 579 35 .
Chr1	stalkie_big_nohaplotig	CDS	246370	246651	.	-	0	Parent=comp161789_c1_seq1.mrna1
Chr1	gffcl	locus	248993	250123	.	-	.	ID=RLOC_00005069;geneIDs=AAEL012638.2.path1;transcripts=AAEL012638.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	248993	250123	.	-	.	ID=AAEL012638.2.mrna1;geneID=AAEL012638.2.path1;Name=AAEL012638.2;Dir=sensecoverage=100.0;identity=99.7;matches=398;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005069
Chr1	stalkie_big_nohaplotig	exon	248993	249108	100	-	.	Parent=AAEL012638.2.mrna1;Target=AAEL012638.2 284 399 +
Chr1	stalkie_big_nohaplotig	exon	249841	250123	99	-	.	Parent=AAEL012638.2.mrna1;Target=AAEL012638.2 1 283 +
Chr1	stalkie_big_nohaplotig	CDS	248993	249108	.	-	2	Parent=AAEL012638.2.mrna1;Target=AAEL012638.2 284 399 +
Chr1	stalkie_big_nohaplotig	CDS	249841	250123	.	-	0	Parent=AAEL012638.2.mrna1;Target=AAEL012638.2 1 283 +
Chr1	gffcl	locus	271268	271826	.	+	.	ID=RLOC_00005070;geneIDs=comp134869_c1_seq1.path1;transcripts=comp134869_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	271268	271826	.	+	.	ID=comp134869_c1_seq1.mrna1;geneID=comp134869_c1_seq1.path1;Name=comp134869_c1_seq1;Dir=indeterminatecoverage=93.5;identity=99.6;matches=557;mismatches=2;indels=0;unknowns=0;Target=comp134869_c1_seq1 559 1 .;CDS_Target=comp134869_c1_seq1 215 159 .;locus=RLOC_00005070
Chr1	stalkie_big_nohaplotig	exon	271268	271826	99	+	.	Parent=comp134869_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	271426	271482	.	+	0	Parent=comp134869_c1_seq1.mrna1
Chr1	gffcl	locus	273074	273424	.	-	.	ID=RLOC_00005071;geneIDs=comp153765_c0_seq1.path1;transcripts=comp153765_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	273074	273424	.	-	.	ID=comp153765_c0_seq1.mrna1;geneID=comp153765_c0_seq1.path1;Name=comp153765_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=344;mismatches=4;indels=3;unknowns=0;Target=comp153765_c0_seq1 348 1 .;CDS_Target=comp153765_c0_seq1 74 3 .;locus=RLOC_00005071
Chr1	stalkie_big_nohaplotig	exon	273074	273424	98	-	.	Parent=comp153765_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	273351	273422	.	-	0	Parent=comp153765_c0_seq1.mrna1
Chr1	gffcl	locus	273620	273906	.	-	.	ID=RLOC_00005072;geneIDs=comp148179_c0_seq1.path1;transcripts=comp148179_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	273620	273906	.	-	.	ID=comp148179_c0_seq1.mrna1;geneID=comp148179_c0_seq1.path1;Name=comp148179_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.3;matches=285;mismatches=2;indels=0;unknowns=0;Target=comp148179_c0_seq1 287 1 .;CDS_Target=comp148179_c0_seq1 71 21 .;locus=RLOC_00005072
Chr1	stalkie_big_nohaplotig	exon	273620	273906	99	-	.	Parent=comp148179_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	273836	273886	.	-	0	Parent=comp148179_c0_seq1.mrna1
Chr1	gffcl	locus	278755	279925	.	+	.	ID=RLOC_00005073;geneIDs=comp148760_c0_seq1.path1;transcripts=comp148760_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	278755	279925	.	+	.	ID=comp148760_c0_seq1.mrna1;geneID=comp148760_c0_seq1.path1;Name=comp148760_c0_seq1;Dir=antisensecoverage=100.0;identity=98.0;matches=1027;mismatches=3;indels=18;unknowns=0;locus=RLOC_00005073
Chr1	stalkie_big_nohaplotig	exon	278755	278777	100	+	.	Parent=comp148760_c0_seq1.mrna1;Target=comp148760_c0_seq1 1025 1047 -
Chr1	stalkie_big_nohaplotig	exon	278858	279098	100	+	.	Parent=comp148760_c0_seq1.mrna1;Target=comp148760_c0_seq1 784 1024 -
Chr1	stalkie_big_nohaplotig	exon	279159	279925	97	+	.	Parent=comp148760_c0_seq1.mrna1;Target=comp148760_c0_seq1 1 783 -
Chr1	stalkie_big_nohaplotig	CDS	279039	279098	.	+	0	Parent=comp148760_c0_seq1.mrna1;Target=comp148760_c0_seq1 784 843 .
Chr1	stalkie_big_nohaplotig	CDS	279159	279419	.	+	0	Parent=comp148760_c0_seq1.mrna1;Target=comp148760_c0_seq1 523 783 .
Chr1	gffcl	locus	281163	282101	.	+	.	ID=RLOC_00005074;geneIDs=comp148728_c0_seq1.path1;transcripts=comp148728_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	281163	282101	.	+	.	ID=comp148728_c0_seq1.mrna1;geneID=comp148728_c0_seq1.path1;Name=comp148728_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=879;mismatches=1;indels=0;unknowns=0;Target=comp148728_c0_seq1 2 121 +;locus=RLOC_00005074
Chr1	stalkie_big_nohaplotig	exon	281163	281337	100	+	.	Parent=comp148728_c0_seq1.mrna1;Target=comp148728_c0_seq1 1 175 +
Chr1	stalkie_big_nohaplotig	exon	281397	282101	99	+	.	Parent=comp148728_c0_seq1.mrna1;Target=comp148728_c0_seq1 176 880 +
Chr1	stalkie_big_nohaplotig	CDS	281164	281283	.	+	0	Parent=comp148728_c0_seq1.mrna1
Chr1	gffcl	locus	284237	286291	.	+	.	ID=RLOC_00005076;geneIDs=comp163886_c1_seq1.path1;transcripts=comp163886_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	284237	286291	.	+	.	ID=comp163886_c1_seq1.mrna1;geneID=comp163886_c1_seq1.path1;Name=comp163886_c1_seq1;Dir=indeterminatecoverage=100.0;identity=94.7;matches=1361;mismatches=36;indels=40;unknowns=0;Target=comp163886_c1_seq1 935 708 .;locus=RLOC_00005076
Chr1	stalkie_big_nohaplotig	exon	284237	284556	91	+	.	Parent=comp163886_c1_seq1.mrna1;Target=comp163886_c1_seq1 345 1 .
Chr1	stalkie_big_nohaplotig	exon	285133	285953	95	+	.	Parent=comp163886_c1_seq1.mrna1;Target=comp163886_c1_seq1 1155 346 .
Chr1	stalkie_big_nohaplotig	exon	286022	286291	97	+	.	Parent=comp163886_c1_seq1.mrna1;Target=comp163886_c1_seq1 1423 1156 .
Chr1	stalkie_big_nohaplotig	CDS	285499	285726	.	+	0	Parent=comp163886_c1_seq1.mrna1
Chr1	gffcl	locus	381131	400632	.	-	.	ID=RLOC_00005078;geneIDs=FBgn0036272.1.path1;transcripts=FBgn0036272.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	381131	400632	.	-	.	ID=FBgn0036272.1.mrna1;geneID=FBgn0036272.1.path1;Name=FBgn0036272.1;Dir=sensecoverage=100.0;identity=99.9;matches=1118;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005078
Chr1	stalkie_big_nohaplotig	exon	381131	381711	99	-	.	Parent=FBgn0036272.1.mrna1;Target=FBgn0036272.1 539 1119 +
Chr1	stalkie_big_nohaplotig	exon	383868	383990	100	-	.	Parent=FBgn0036272.1.mrna1;Target=FBgn0036272.1 416 538 +
Chr1	stalkie_big_nohaplotig	exon	390660	390771	100	-	.	Parent=FBgn0036272.1.mrna1;Target=FBgn0036272.1 304 415 +
Chr1	stalkie_big_nohaplotig	exon	400330	400632	100	-	.	Parent=FBgn0036272.1.mrna1;Target=FBgn0036272.1 1 303 +
Chr1	stalkie_big_nohaplotig	CDS	381131	381711	.	-	2	Parent=FBgn0036272.1.mrna1;Target=FBgn0036272.1 539 1119 +
Chr1	stalkie_big_nohaplotig	CDS	383868	383990	.	-	2	Parent=FBgn0036272.1.mrna1;Target=FBgn0036272.1 416 538 +
Chr1	stalkie_big_nohaplotig	CDS	390660	390771	.	-	0	Parent=FBgn0036272.1.mrna1;Target=FBgn0036272.1 304 415 +
Chr1	stalkie_big_nohaplotig	CDS	400330	400632	.	-	0	Parent=FBgn0036272.1.mrna1;Target=FBgn0036272.1 1 303 +
Chr1	gffcl	locus	407236	410170	.	+	.	ID=RLOC_00005079;geneIDs=FBgn0036273.1.path1;transcripts=FBgn0036273.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	407236	410170	.	+	.	ID=FBgn0036273.1.mrna1;geneID=FBgn0036273.1.path1;Name=FBgn0036273.1;Dir=sensecoverage=100.0;identity=99.8;matches=1866;mismatches=2;indels=1;unknowns=0;Target=FBgn0036273.1 3 101 +;locus=RLOC_00005079
Chr1	stalkie_big_nohaplotig	exon	407236	407956	99	+	.	Parent=FBgn0036273.1.mrna1;Target=FBgn0036273.1 1 722 +
Chr1	stalkie_big_nohaplotig	exon	408828	408956	100	+	.	Parent=FBgn0036273.1.mrna1;Target=FBgn0036273.1 723 851 +
Chr1	stalkie_big_nohaplotig	exon	409024	409681	100	+	.	Parent=FBgn0036273.1.mrna1;Target=FBgn0036273.1 852 1509 +
Chr1	stalkie_big_nohaplotig	exon	409745	409998	100	+	.	Parent=FBgn0036273.1.mrna1;Target=FBgn0036273.1 1510 1763 +
Chr1	stalkie_big_nohaplotig	exon	410065	410170	100	+	.	Parent=FBgn0036273.1.mrna1;Target=FBgn0036273.1 1764 1869 +
Chr1	stalkie_big_nohaplotig	CDS	407238	407335	.	+	0	Parent=FBgn0036273.1.mrna1
Chr1	gffcl	locus	417106	419794	.	-	.	ID=RLOC_00005080;geneIDs=ORF195.path1;transcripts=ORF195.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	417106	419794	.	-	.	ID=ORF195.mrna1;geneID=ORF195.path1;Name=ORF195;Dir=sensecoverage=100.0;identity=99.2;matches=2556;mismatches=6;indels=15;unknowns=0;locus=RLOC_00005080
Chr1	stalkie_big_nohaplotig	exon	417106	418305	99	-	.	Parent=ORF195.mrna1;Target=ORF195 1363 2562 +
Chr1	stalkie_big_nohaplotig	exon	418364	418791	100	-	.	Parent=ORF195.mrna1;Target=ORF195 935 1362 +
Chr1	stalkie_big_nohaplotig	exon	418846	419794	98	-	.	Parent=ORF195.mrna1;Target=ORF195 1 934 +
Chr1	stalkie_big_nohaplotig	CDS	417106	418305	.	-	0	Parent=ORF195.mrna1;Target=ORF195 1363 2562 +
Chr1	stalkie_big_nohaplotig	CDS	418364	418791	.	-	2	Parent=ORF195.mrna1;Target=ORF195 935 1362 +
Chr1	stalkie_big_nohaplotig	CDS	418846	419794	.	-	0	Parent=ORF195.mrna1;Target=ORF195 1 934 +
Chr1	gffcl	locus	434594	438101	.	-	.	ID=RLOC_00005081;geneIDs=FBgn0036274.path1;transcripts=FBgn0036274.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	434594	438101	.	-	.	ID=FBgn0036274.mrna1;geneID=FBgn0036274.path1;Name=FBgn0036274;Dir=sensecoverage=100.0;identity=100.0;matches=843;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005081
Chr1	stalkie_big_nohaplotig	exon	434594	434790	100	-	.	Parent=FBgn0036274.mrna1;Target=FBgn0036274 647 843 +
Chr1	stalkie_big_nohaplotig	exon	437030	437309	100	-	.	Parent=FBgn0036274.mrna1;Target=FBgn0036274 367 646 +
Chr1	stalkie_big_nohaplotig	exon	437394	437581	100	-	.	Parent=FBgn0036274.mrna1;Target=FBgn0036274 179 366 +
Chr1	stalkie_big_nohaplotig	exon	437924	438101	100	-	.	Parent=FBgn0036274.mrna1;Target=FBgn0036274 1 178 +
Chr1	stalkie_big_nohaplotig	CDS	434594	434790	.	-	2	Parent=FBgn0036274.mrna1;Target=FBgn0036274 647 843 +
Chr1	stalkie_big_nohaplotig	CDS	437030	437309	.	-	0	Parent=FBgn0036274.mrna1;Target=FBgn0036274 367 646 +
Chr1	stalkie_big_nohaplotig	CDS	437394	437581	.	-	2	Parent=FBgn0036274.mrna1;Target=FBgn0036274 179 366 +
Chr1	stalkie_big_nohaplotig	CDS	437924	438101	.	-	0	Parent=FBgn0036274.mrna1;Target=FBgn0036274 1 178 +
Chr1	gffcl	locus	491849	602115	.	-	.	ID=RLOC_00005082;geneIDs=FBgn0259140.1.path1;transcripts=FBgn0259140.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	491849	602115	.	-	.	ID=FBgn0259140.1.mrna1;geneID=FBgn0259140.1.path1;Name=FBgn0259140.1;Dir=sensecoverage=93.4;identity=97.9;matches=7896;mismatches=124;indels=44;unknowns=9;locus=RLOC_00005082
Chr1	stalkie_big_nohaplotig	exon	491849	491977	99	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 10127 10255 +
Chr1	stalkie_big_nohaplotig	exon	514895	514904	100	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 10113 10122 +
Chr1	stalkie_big_nohaplotig	exon	514930	514938	88	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 10047 10055 +
Chr1	stalkie_big_nohaplotig	exon	538575	538578	100	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 10043 10046 +
Chr1	stalkie_big_nohaplotig	exon	539637	539641	100	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 10038 10042 +
Chr1	stalkie_big_nohaplotig	exon	546995	546998	100	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 10034 10037 +
Chr1	stalkie_big_nohaplotig	exon	550019	550031	100	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 10008 10020 +
Chr1	stalkie_big_nohaplotig	exon	554200	554212	76	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 9995 10007 +
Chr1	stalkie_big_nohaplotig	exon	556993	556994	100	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 9993 9994 +
Chr1	stalkie_big_nohaplotig	exon	563155	563159	100	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 9831 9835 +
Chr1	stalkie_big_nohaplotig	exon	563301	563309	100	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 9721 9729 +
Chr1	stalkie_big_nohaplotig	exon	563463	563471	100	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 9505 9513 +
Chr1	stalkie_big_nohaplotig	exon	563511	563518	100	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 9443 9450 +
Chr1	stalkie_big_nohaplotig	exon	563655	563865	54	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 9066 9296 +
Chr1	stalkie_big_nohaplotig	exon	564501	564532	100	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 7575 7606 +
Chr1	stalkie_big_nohaplotig	exon	564756	566080	99	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 6250 7574 +
Chr1	stalkie_big_nohaplotig	exon	588493	588975	98	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 5767 6249 +
Chr1	stalkie_big_nohaplotig	exon	589041	589192	99	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 5615 5766 +
Chr1	stalkie_big_nohaplotig	exon	590585	591050	98	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 5149 5614 +
Chr1	stalkie_big_nohaplotig	exon	591108	591172	98	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 5084 5148 +
Chr1	stalkie_big_nohaplotig	exon	591228	591315	100	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 4996 5083 +
Chr1	stalkie_big_nohaplotig	exon	591430	592948	99	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 3477 4995 +
Chr1	stalkie_big_nohaplotig	exon	594533	594722	99	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 3287 3476 +
Chr1	stalkie_big_nohaplotig	exon	594789	594928	98	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 3147 3286 +
Chr1	stalkie_big_nohaplotig	exon	594996	595363	99	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 2779 3146 +
Chr1	stalkie_big_nohaplotig	exon	595462	595709	98	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 2531 2778 +
Chr1	stalkie_big_nohaplotig	exon	595767	595935	99	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 2362 2530 +
Chr1	stalkie_big_nohaplotig	exon	595999	597072	99	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 1288 2361 +
Chr1	stalkie_big_nohaplotig	exon	597133	597369	99	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 1051 1287 +
Chr1	stalkie_big_nohaplotig	exon	597443	597818	99	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 675 1050 +
Chr1	stalkie_big_nohaplotig	exon	598188	598291	99	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 571 674 +
Chr1	stalkie_big_nohaplotig	exon	601546	602115	99	-	.	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 1 570 +
Chr1	stalkie_big_nohaplotig	CDS	491850	491977	.	-	0	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 10127 10254 +
Chr1	stalkie_big_nohaplotig	CDS	514895	514904	.	-	1	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 10113 10122 +
Chr1	stalkie_big_nohaplotig	CDS	514930	514938	.	-	1	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 10047 10055 +
Chr1	stalkie_big_nohaplotig	CDS	538575	538578	.	-	2	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 10043 10046 +
Chr1	stalkie_big_nohaplotig	CDS	539637	539641	.	-	1	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 10038 10042 +
Chr1	stalkie_big_nohaplotig	CDS	546995	546998	.	-	2	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 10034 10037 +
Chr1	stalkie_big_nohaplotig	CDS	550019	550031	.	-	0	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 10008 10020 +
Chr1	stalkie_big_nohaplotig	CDS	554200	554212	.	-	1	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 9995 10007 +
Chr1	stalkie_big_nohaplotig	CDS	556993	556994	.	-	0	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 9993 9994 +
Chr1	stalkie_big_nohaplotig	CDS	563155	563159	.	-	2	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 9831 9835 +
Chr1	stalkie_big_nohaplotig	CDS	563301	563309	.	-	2	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 9721 9729 +
Chr1	stalkie_big_nohaplotig	CDS	563463	563471	.	-	2	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 9505 9513 +
Chr1	stalkie_big_nohaplotig	CDS	563511	563518	.	-	1	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 9443 9450 +
Chr1	stalkie_big_nohaplotig	CDS	563655	563865	.	-	2	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 9066 9296 +
Chr1	stalkie_big_nohaplotig	CDS	564501	564532	.	-	1	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 7575 7606 +
Chr1	stalkie_big_nohaplotig	CDS	564756	566080	.	-	0	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 6250 7574 +
Chr1	stalkie_big_nohaplotig	CDS	588493	588975	.	-	0	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 5767 6249 +
Chr1	stalkie_big_nohaplotig	CDS	589041	589192	.	-	2	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 5615 5766 +
Chr1	stalkie_big_nohaplotig	CDS	590585	591050	.	-	0	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 5149 5614 +
Chr1	stalkie_big_nohaplotig	CDS	591108	591172	.	-	2	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 5084 5148 +
Chr1	stalkie_big_nohaplotig	CDS	591228	591315	.	-	0	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 4996 5083 +
Chr1	stalkie_big_nohaplotig	CDS	591430	592948	.	-	1	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 3477 4995 +
Chr1	stalkie_big_nohaplotig	CDS	594533	594722	.	-	2	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 3287 3476 +
Chr1	stalkie_big_nohaplotig	CDS	594789	594928	.	-	1	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 3147 3286 +
Chr1	stalkie_big_nohaplotig	CDS	594996	595363	.	-	0	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 2779 3146 +
Chr1	stalkie_big_nohaplotig	CDS	595462	595709	.	-	2	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 2531 2778 +
Chr1	stalkie_big_nohaplotig	CDS	595767	595935	.	-	0	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 2362 2530 +
Chr1	stalkie_big_nohaplotig	CDS	595999	597072	.	-	0	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 1288 2361 +
Chr1	stalkie_big_nohaplotig	CDS	597133	597369	.	-	0	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 1051 1287 +
Chr1	stalkie_big_nohaplotig	CDS	597443	597818	.	-	1	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 675 1050 +
Chr1	stalkie_big_nohaplotig	CDS	598188	598291	.	-	0	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 571 674 +
Chr1	stalkie_big_nohaplotig	CDS	601546	602115	.	-	0	Parent=FBgn0259140.1.mrna1;Target=FBgn0259140.1 1 570 +
Chr1	gffcl	locus	605908	606371	.	+	.	ID=RLOC_00005083;geneIDs=FBgn0036277.1.path1;transcripts=FBgn0036277.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	605908	606371	.	+	.	ID=FBgn0036277.1.mrna1;geneID=FBgn0036277.1.path1;Name=FBgn0036277.1;Dir=sensecoverage=100.0;identity=100.0;matches=339;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005083
Chr1	stalkie_big_nohaplotig	exon	605908	605964	100	+	.	Parent=FBgn0036277.1.mrna1;Target=FBgn0036277.1 1 57 +
Chr1	stalkie_big_nohaplotig	exon	606022	606089	100	+	.	Parent=FBgn0036277.1.mrna1;Target=FBgn0036277.1 58 125 +
Chr1	stalkie_big_nohaplotig	exon	606158	606371	100	+	.	Parent=FBgn0036277.1.mrna1;Target=FBgn0036277.1 126 339 +
Chr1	stalkie_big_nohaplotig	CDS	605908	605964	.	+	0	Parent=FBgn0036277.1.mrna1;Target=FBgn0036277.1 1 57 +
Chr1	stalkie_big_nohaplotig	CDS	606022	606089	.	+	0	Parent=FBgn0036277.1.mrna1;Target=FBgn0036277.1 58 125 +
Chr1	stalkie_big_nohaplotig	CDS	606158	606371	.	+	1	Parent=FBgn0036277.1.mrna1;Target=FBgn0036277.1 126 339 +
Chr1	gffcl	locus	620245	620896	.	+	.	ID=RLOC_00005084;geneIDs=comp152681_c0_seq1.path1;transcripts=comp152681_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	620245	620896	.	+	.	ID=comp152681_c0_seq1.mrna1;geneID=comp152681_c0_seq1.path1;Name=comp152681_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.0;matches=642;mismatches=10;indels=24;unknowns=0;Target=comp152681_c0_seq1 676 1 .;CDS_Target=comp152681_c0_seq1 675 538 .;locus=RLOC_00005084
Chr1	stalkie_big_nohaplotig	exon	620245	620896	94	+	.	Parent=comp152681_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	620758	620895	.	+	0	Parent=comp152681_c0_seq1.mrna1
Chr1	gffcl	locus	621821	622402	.	+	.	ID=RLOC_00005085;geneIDs=comp149508_c0_seq1.path1;transcripts=comp149508_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	621821	622402	.	+	.	ID=comp149508_c0_seq1.mrna1;geneID=comp149508_c0_seq1.path1;Name=comp149508_c0_seq1;Dir=indeterminatecoverage=96.2;identity=97.1;matches=565;mismatches=17;indels=0;unknowns=0;Target=comp149508_c0_seq1 605 24 .;CDS_Target=comp149508_c0_seq1 603 544 .;locus=RLOC_00005085
Chr1	stalkie_big_nohaplotig	exon	621821	622402	97	+	.	Parent=comp149508_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	622341	622400	.	+	0	Parent=comp149508_c0_seq1.mrna1
Chr1	gffcl	locus	623554	647783	.	-	.	ID=RLOC_00005086;geneIDs=FBgn0036278.1.path1;transcripts=FBgn0036278.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	623554	647783	.	-	.	ID=FBgn0036278.1.mrna1;geneID=FBgn0036278.1.path1;Name=FBgn0036278.1;Dir=sensecoverage=100.0;identity=100.0;matches=1839;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005086
Chr1	stalkie_big_nohaplotig	exon	623554	624040	100	-	.	Parent=FBgn0036278.1.mrna1;Target=FBgn0036278.1 1353 1839 +
Chr1	stalkie_big_nohaplotig	exon	624261	624412	100	-	.	Parent=FBgn0036278.1.mrna1;Target=FBgn0036278.1 1201 1352 +
Chr1	stalkie_big_nohaplotig	exon	630147	630349	100	-	.	Parent=FBgn0036278.1.mrna1;Target=FBgn0036278.1 998 1200 +
Chr1	stalkie_big_nohaplotig	exon	630443	630626	100	-	.	Parent=FBgn0036278.1.mrna1;Target=FBgn0036278.1 814 997 +
Chr1	stalkie_big_nohaplotig	exon	646971	647783	100	-	.	Parent=FBgn0036278.1.mrna1;Target=FBgn0036278.1 1 813 +
Chr1	stalkie_big_nohaplotig	CDS	623554	624040	.	-	1	Parent=FBgn0036278.1.mrna1;Target=FBgn0036278.1 1353 1839 +
Chr1	stalkie_big_nohaplotig	CDS	624261	624412	.	-	0	Parent=FBgn0036278.1.mrna1;Target=FBgn0036278.1 1201 1352 +
Chr1	stalkie_big_nohaplotig	CDS	630147	630349	.	-	2	Parent=FBgn0036278.1.mrna1;Target=FBgn0036278.1 998 1200 +
Chr1	stalkie_big_nohaplotig	CDS	630443	630626	.	-	0	Parent=FBgn0036278.1.mrna1;Target=FBgn0036278.1 814 997 +
Chr1	stalkie_big_nohaplotig	CDS	646971	647783	.	-	0	Parent=FBgn0036278.1.mrna1;Target=FBgn0036278.1 1 813 +
Chr1	gffcl	locus	687266	687684	.	-	.	ID=RLOC_00005087;geneIDs=comp156934_c0_seq1.path1;transcripts=comp156934_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	687266	687684	.	-	.	ID=comp156934_c0_seq1.mrna1;geneID=comp156934_c0_seq1.path1;Name=comp156934_c0_seq1;Dir=indeterminatecoverage=51.6;identity=98.4;matches=419;mismatches=0;indels=7;unknowns=0;Target=comp156934_c0_seq1 426 1 .;CDS_Target=comp156934_c0_seq1 131 66 .;locus=RLOC_00005087
Chr1	stalkie_big_nohaplotig	exon	687266	687684	98	-	.	Parent=comp156934_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	687561	687626	.	-	0	Parent=comp156934_c0_seq1.mrna1
Chr1	gffcl	locus	687863	688428	.	+	.	ID=RLOC_00005088;geneIDs=comp151713_c1_seq1.path1;transcripts=comp151713_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	687863	688428	.	+	.	ID=comp151713_c1_seq1.mrna1;geneID=comp151713_c1_seq1.path1;Name=comp151713_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=564;mismatches=2;indels=0;unknowns=0;Target=comp151713_c1_seq1 566 1 .;CDS_Target=comp151713_c1_seq1 48 1 .;locus=RLOC_00005088
Chr1	stalkie_big_nohaplotig	exon	687863	688428	99	+	.	Parent=comp151713_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	687863	687910	.	+	0	Parent=comp151713_c1_seq1.mrna1
Chr1	gffcl	locus	739009	744044	.	+	.	ID=RLOC_00005089;geneIDs=FBgn0085420.1.path1;transcripts=FBgn0085420.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	739009	744044	.	+	.	ID=FBgn0085420.1.mrna1;geneID=FBgn0085420.1.path1;Name=FBgn0085420.1;Dir=sensecoverage=59.4;identity=99.5;matches=737;mismatches=3;indels=1;unknowns=0;locus=RLOC_00005089
Chr1	stalkie_big_nohaplotig	exon	739009	739063	98	+	.	Parent=FBgn0085420.1.mrna1;Target=FBgn0085420.1 1 55 +
Chr1	stalkie_big_nohaplotig	exon	739134	739353	99	+	.	Parent=FBgn0085420.1.mrna1;Target=FBgn0085420.1 56 274 +
Chr1	stalkie_big_nohaplotig	exon	739476	739637	100	+	.	Parent=FBgn0085420.1.mrna1;Target=FBgn0085420.1 275 436 +
Chr1	stalkie_big_nohaplotig	exon	742331	742459	100	+	.	Parent=FBgn0085420.1.mrna1;Target=FBgn0085420.1 437 565 +
Chr1	stalkie_big_nohaplotig	exon	743405	743495	100	+	.	Parent=FBgn0085420.1.mrna1;Target=FBgn0085420.1 566 656 +
Chr1	stalkie_big_nohaplotig	exon	743961	744044	98	+	.	Parent=FBgn0085420.1.mrna1;Target=FBgn0085420.1 657 740 +
Chr1	stalkie_big_nohaplotig	CDS	739173	739353	.	+	0	Parent=FBgn0085420.1.mrna1;Target=FBgn0085420.1 94 274 +
Chr1	stalkie_big_nohaplotig	CDS	739476	739637	.	+	2	Parent=FBgn0085420.1.mrna1;Target=FBgn0085420.1 275 436 +
Chr1	stalkie_big_nohaplotig	CDS	742331	742459	.	+	2	Parent=FBgn0085420.1.mrna1;Target=FBgn0085420.1 437 565 +
Chr1	stalkie_big_nohaplotig	CDS	743405	743495	.	+	2	Parent=FBgn0085420.1.mrna1;Target=FBgn0085420.1 566 656 +
Chr1	stalkie_big_nohaplotig	CDS	743961	744044	.	+	1	Parent=FBgn0085420.1.mrna1;Target=FBgn0085420.1 657 740 +
Chr1	gffcl	locus	750063	756464	.	-	.	ID=RLOC_00005090;geneIDs=FBgn0085420.1.path2;transcripts=FBgn0085420.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	750063	756464	.	-	.	ID=FBgn0085420.1.mrna2;geneID=FBgn0085420.1.path2;Name=FBgn0085420.1;Dir=sensecoverage=40.6;identity=99.6;matches=503;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005090
Chr1	stalkie_big_nohaplotig	exon	750063	750133	100	-	.	Parent=FBgn0085420.1.mrna2;Target=FBgn0085420.1 1175 1245 +
Chr1	stalkie_big_nohaplotig	exon	750659	750919	99	-	.	Parent=FBgn0085420.1.mrna2;Target=FBgn0085420.1 914 1174 +
Chr1	stalkie_big_nohaplotig	exon	754425	754487	100	-	.	Parent=FBgn0085420.1.mrna2;Target=FBgn0085420.1 851 913 +
Chr1	stalkie_big_nohaplotig	exon	756355	756464	100	-	.	Parent=FBgn0085420.1.mrna2;Target=FBgn0085420.1 741 850 +
Chr1	stalkie_big_nohaplotig	CDS	750063	750133	.	-	0	Parent=FBgn0085420.1.mrna2;Target=FBgn0085420.1 1175 1245 +
Chr1	stalkie_big_nohaplotig	CDS	750659	750919	.	-	0	Parent=FBgn0085420.1.mrna2;Target=FBgn0085420.1 914 1174 +
Chr1	stalkie_big_nohaplotig	CDS	754425	754487	.	-	0	Parent=FBgn0085420.1.mrna2;Target=FBgn0085420.1 851 913 +
Chr1	stalkie_big_nohaplotig	CDS	756355	756464	.	-	2	Parent=FBgn0085420.1.mrna2;Target=FBgn0085420.1 741 850 +
Chr1	gffcl	locus	816649	819894	.	+	.	ID=RLOC_00005091;geneIDs=comp157892_c0_seq1.path1;transcripts=comp157892_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	816649	819894	.	+	.	ID=comp157892_c0_seq1.mrna1;geneID=comp157892_c0_seq1.path1;Name=comp157892_c0_seq1;Dir=sensecoverage=95.1;identity=95.1;matches=1427;mismatches=52;indels=22;unknowns=0;locus=RLOC_00005091
Chr1	stalkie_big_nohaplotig	exon	816649	817106	99	+	.	Parent=comp157892_c0_seq1.mrna1;Target=comp157892_c0_seq1 78 535 +
Chr1	stalkie_big_nohaplotig	exon	817678	818024	93	+	.	Parent=comp157892_c0_seq1.mrna1;Target=comp157892_c0_seq1 536 882 +
Chr1	stalkie_big_nohaplotig	exon	818561	818601	95	+	.	Parent=comp157892_c0_seq1.mrna1;Target=comp157892_c0_seq1 883 923 +
Chr1	stalkie_big_nohaplotig	exon	818995	819127	83	+	.	Parent=comp157892_c0_seq1.mrna1;Target=comp157892_c0_seq1 924 1049 +
Chr1	stalkie_big_nohaplotig	exon	819188	819447	95	+	.	Parent=comp157892_c0_seq1.mrna1;Target=comp157892_c0_seq1 1050 1314 +
Chr1	stalkie_big_nohaplotig	exon	819584	819679	89	+	.	Parent=comp157892_c0_seq1.mrna1;Target=comp157892_c0_seq1 1315 1405 +
Chr1	stalkie_big_nohaplotig	exon	819737	819894	97	+	.	Parent=comp157892_c0_seq1.mrna1;Target=comp157892_c0_seq1 1406 1564 +
Chr1	stalkie_big_nohaplotig	CDS	816727	817106	.	+	0	Parent=comp157892_c0_seq1.mrna1;Target=comp157892_c0_seq1 156 535 +
Chr1	stalkie_big_nohaplotig	CDS	817678	817693	.	+	1	Parent=comp157892_c0_seq1.mrna1;Target=comp157892_c0_seq1 536 551 +
Chr1	gffcl	locus	863518	865426	.	+	.	ID=RLOC_00005092;geneIDs=FBgn0035900.2.path3;transcripts=FBgn0035900.2.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	863518	865426	.	+	.	ID=FBgn0035900.2.mrna3;geneID=FBgn0035900.2.path3;Name=FBgn0035900.2;Dir=sensecoverage=100.0;identity=98.9;matches=1674;mismatches=18;indels=0;unknowns=0;locus=RLOC_00005092
Chr1	stalkie_big_nohaplotig	exon	863518	864188	98	+	.	Parent=FBgn0035900.2.mrna3;Target=FBgn0035900.2 1 671 +
Chr1	stalkie_big_nohaplotig	exon	864254	864715	99	+	.	Parent=FBgn0035900.2.mrna3;Target=FBgn0035900.2 672 1133 +
Chr1	stalkie_big_nohaplotig	exon	864786	864981	100	+	.	Parent=FBgn0035900.2.mrna3;Target=FBgn0035900.2 1134 1329 +
Chr1	stalkie_big_nohaplotig	exon	865064	865426	99	+	.	Parent=FBgn0035900.2.mrna3;Target=FBgn0035900.2 1330 1692 +
Chr1	stalkie_big_nohaplotig	CDS	863518	864188	.	+	0	Parent=FBgn0035900.2.mrna3;Target=FBgn0035900.2 1 671 +
Chr1	stalkie_big_nohaplotig	CDS	864254	864715	.	+	1	Parent=FBgn0035900.2.mrna3;Target=FBgn0035900.2 672 1133 +
Chr1	stalkie_big_nohaplotig	CDS	864786	864981	.	+	1	Parent=FBgn0035900.2.mrna3;Target=FBgn0035900.2 1134 1329 +
Chr1	stalkie_big_nohaplotig	CDS	865064	865426	.	+	0	Parent=FBgn0035900.2.mrna3;Target=FBgn0035900.2 1330 1692 +
Chr1	gffcl	locus	872876	873262	.	+	.	ID=RLOC_00005093;geneIDs=comp130253_c0_seq1.path1;transcripts=comp130253_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	872876	873262	.	+	.	ID=comp130253_c0_seq1.mrna1;geneID=comp130253_c0_seq1.path1;Name=comp130253_c0_seq1;Dir=indeterminatecoverage=100.0;identity=89.4;matches=346;mismatches=3;indels=38;unknowns=0;Target=comp130253_c0_seq1 349 1 .;CDS_Target=comp130253_c0_seq1 136 2 .;locus=RLOC_00005093
Chr1	stalkie_big_nohaplotig	exon	872876	873262	89	+	.	Parent=comp130253_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	872877	873011	.	+	0	Parent=comp130253_c0_seq1.mrna1
Chr1	gffcl	locus	976860	977411	.	+	.	ID=RLOC_00005095;geneIDs=comp118001_c0_seq1.path1;transcripts=comp118001_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	976860	977411	.	+	.	ID=comp118001_c0_seq1.mrna1;geneID=comp118001_c0_seq1.path1;Name=comp118001_c0_seq1;Dir=antisensecoverage=100.0;identity=97.2;matches=455;mismatches=12;indels=1;unknowns=0;locus=RLOC_00005095
Chr1	stalkie_big_nohaplotig	exon	976860	976892	96	+	.	Parent=comp118001_c0_seq1.mrna1;Target=comp118001_c0_seq1 435 467 -
Chr1	stalkie_big_nohaplotig	exon	976977	977411	97	+	.	Parent=comp118001_c0_seq1.mrna1;Target=comp118001_c0_seq1 1 434 -
Chr1	stalkie_big_nohaplotig	CDS	976860	976892	.	+	0	Parent=comp118001_c0_seq1.mrna1;Target=comp118001_c0_seq1 435 467 .
Chr1	stalkie_big_nohaplotig	CDS	976977	977033	.	+	0	Parent=comp118001_c0_seq1.mrna1;Target=comp118001_c0_seq1 378 434 .
Chr1	gffcl	locus	990539	991652	.	-	.	ID=RLOC_00005096;geneIDs=comp155990_c0_seq1.path1;transcripts=comp155990_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	990539	991652	.	-	.	ID=comp155990_c0_seq1.mrna1;geneID=comp155990_c0_seq1.path1;Name=comp155990_c0_seq1;Dir=antisensecoverage=95.8;identity=98.4;matches=919;mismatches=15;indels=0;unknowns=0;locus=RLOC_00005096
Chr1	stalkie_big_nohaplotig	exon	990539	990682	96	-	.	Parent=comp155990_c0_seq1.mrna1;Target=comp155990_c0_seq1 1 144 -
Chr1	stalkie_big_nohaplotig	exon	990741	990817	98	-	.	Parent=comp155990_c0_seq1.mrna1;Target=comp155990_c0_seq1 145 221 -
Chr1	stalkie_big_nohaplotig	exon	990884	991204	100	-	.	Parent=comp155990_c0_seq1.mrna1;Target=comp155990_c0_seq1 222 542 -
Chr1	stalkie_big_nohaplotig	exon	991261	991652	97	-	.	Parent=comp155990_c0_seq1.mrna1;Target=comp155990_c0_seq1 543 934 -
Chr1	stalkie_big_nohaplotig	CDS	990755	990817	.	-	0	Parent=comp155990_c0_seq1.mrna1;Target=comp155990_c0_seq1 159 221 .
Chr1	stalkie_big_nohaplotig	CDS	990884	991204	.	-	0	Parent=comp155990_c0_seq1.mrna1;Target=comp155990_c0_seq1 222 542 .
Chr1	stalkie_big_nohaplotig	CDS	991261	991455	.	-	0	Parent=comp155990_c0_seq1.mrna1;Target=comp155990_c0_seq1 543 737 .
Chr1	gffcl	locus	1004423	1006271	.	+	.	ID=RLOC_00005097;geneIDs=comp152733_c0_seq1.path1;transcripts=comp152733_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1004423	1006271	.	+	.	ID=comp152733_c0_seq1.mrna1;geneID=comp152733_c0_seq1.path1;Name=comp152733_c0_seq1;Dir=antisensecoverage=99.8;identity=93.7;matches=1340;mismatches=47;indels=43;unknowns=0;locus=RLOC_00005097
Chr1	stalkie_big_nohaplotig	exon	1004423	1004620	80	+	.	Parent=comp152733_c0_seq1.mrna1;Target=comp152733_c0_seq1 1233 1402 -
Chr1	stalkie_big_nohaplotig	exon	1004735	1004904	89	+	.	Parent=comp152733_c0_seq1.mrna1;Target=comp152733_c0_seq1 1052 1232 -
Chr1	stalkie_big_nohaplotig	exon	1004997	1005171	95	+	.	Parent=comp152733_c0_seq1.mrna1;Target=comp152733_c0_seq1 877 1051 -
Chr1	stalkie_big_nohaplotig	exon	1005230	1005489	96	+	.	Parent=comp152733_c0_seq1.mrna1;Target=comp152733_c0_seq1 617 876 -
Chr1	stalkie_big_nohaplotig	exon	1005590	1005665	96	+	.	Parent=comp152733_c0_seq1.mrna1;Target=comp152733_c0_seq1 541 616 -
Chr1	stalkie_big_nohaplotig	exon	1005736	1006271	97	+	.	Parent=comp152733_c0_seq1.mrna1;Target=comp152733_c0_seq1 1 540 -
Chr1	stalkie_big_nohaplotig	CDS	1005031	1005171	.	+	0	Parent=comp152733_c0_seq1.mrna1;Target=comp152733_c0_seq1 877 1017 .
Chr1	stalkie_big_nohaplotig	CDS	1005230	1005277	.	+	0	Parent=comp152733_c0_seq1.mrna1;Target=comp152733_c0_seq1 829 876 .
Chr1	gffcl	locus	1030788	1032030	.	+	.	ID=RLOC_00005098;geneIDs=comp158019_c0_seq1.path1;transcripts=comp158019_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1030788	1032030	.	+	.	ID=comp158019_c0_seq1.mrna1;geneID=comp158019_c0_seq1.path1;Name=comp158019_c0_seq1;Dir=antisensecoverage=99.1;identity=79.9;matches=493;mismatches=40;indels=84;unknowns=0;Target=comp158019_c0_seq1 639 650 .;locus=RLOC_00005098
Chr1	stalkie_big_nohaplotig	exon	1030788	1030856	85	+	.	Parent=comp158019_c0_seq1.mrna1;Target=comp158019_c0_seq1 583 650 -
Chr1	stalkie_big_nohaplotig	exon	1030940	1031067	54	+	.	Parent=comp158019_c0_seq1.mrna1;Target=comp158019_c0_seq1 349 547 -
Chr1	stalkie_big_nohaplotig	exon	1031693	1032030	93	+	.	Parent=comp158019_c0_seq1.mrna1;Target=comp158019_c0_seq1 1 348 -
Chr1	stalkie_big_nohaplotig	CDS	1030788	1030800	.	+	0	Parent=comp158019_c0_seq1.mrna1
Chr1	gffcl	locus	1048316	1049209	.	+	.	ID=RLOC_00005099;geneIDs=comp151761_c0_seq1.path1;transcripts=comp151761_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1048316	1049209	.	+	.	ID=comp151761_c0_seq1.mrna1;geneID=comp151761_c0_seq1.path1;Name=comp151761_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.6;matches=890;mismatches=4;indels=0;unknowns=0;Target=comp151761_c0_seq1 897 4 .;CDS_Target=comp151761_c0_seq1 789 127 .;locus=RLOC_00005099
Chr1	stalkie_big_nohaplotig	exon	1048316	1049209	99	+	.	Parent=comp151761_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	1048439	1049101	.	+	0	Parent=comp151761_c0_seq1.mrna1
Chr1	gffcl	locus	1091083	1091586	.	-	.	ID=RLOC_00005100;geneIDs=comp150963_c0_seq1.path1;transcripts=comp150963_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1091083	1091586	.	-	.	ID=comp150963_c0_seq1.mrna1;geneID=comp150963_c0_seq1.path1;Name=comp150963_c0_seq1;Dir=antisensecoverage=99.5;identity=96.8;matches=424;mismatches=14;indels=0;unknowns=0;Target=comp150963_c0_seq1 219 437 .;locus=RLOC_00005100
Chr1	stalkie_big_nohaplotig	exon	1091083	1091235	96	-	.	Parent=comp150963_c0_seq1.mrna1;Target=comp150963_c0_seq1 2 154 -
Chr1	stalkie_big_nohaplotig	exon	1091302	1091586	96	-	.	Parent=comp150963_c0_seq1.mrna1;Target=comp150963_c0_seq1 155 439 -
Chr1	stalkie_big_nohaplotig	CDS	1091366	1091584	.	-	0	Parent=comp150963_c0_seq1.mrna1
Chr1	gffcl	locus	1121309	1123618	.	-	.	ID=RLOC_00005101;geneIDs=comp163361_c0_seq1.path1;transcripts=comp163361_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1121309	1123618	.	-	.	ID=comp163361_c0_seq1.mrna1;geneID=comp163361_c0_seq1.path1;Name=comp163361_c0_seq1;Dir=sensecoverage=99.7;identity=96.0;matches=2050;mismatches=29;indels=57;unknowns=0;Target=comp163361_c0_seq1 114 635 +;locus=RLOC_00005101
Chr1	stalkie_big_nohaplotig	exon	1121309	1121459	100	-	.	Parent=comp163361_c0_seq1.mrna1;Target=comp163361_c0_seq1 2008 2158 +
Chr1	stalkie_big_nohaplotig	exon	1121570	1122079	90	-	.	Parent=comp163361_c0_seq1.mrna1;Target=comp163361_c0_seq1 1430 1973 +
Chr1	stalkie_big_nohaplotig	exon	1122137	1122301	96	-	.	Parent=comp163361_c0_seq1.mrna1;Target=comp163361_c0_seq1 1266 1429 +
Chr1	stalkie_big_nohaplotig	exon	1122354	1123618	97	-	.	Parent=comp163361_c0_seq1.mrna1;Target=comp163361_c0_seq1 1 1265 +
Chr1	stalkie_big_nohaplotig	CDS	1122984	1123505	.	-	0	Parent=comp163361_c0_seq1.mrna1
Chr1	gffcl	locus	1123783	1136755	.	+	.	ID=RLOC_00005102;geneIDs=FBgn0085371.1.path1;transcripts=FBgn0085371.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1123783	1136755	.	+	.	ID=FBgn0085371.1.mrna1;geneID=FBgn0085371.1.path1;Name=FBgn0085371.1;Dir=sensecoverage=100.0;identity=99.3;matches=1542;mismatches=11;indels=0;unknowns=1;locus=RLOC_00005102
Chr1	stalkie_big_nohaplotig	exon	1123783	1124010	96	+	.	Parent=FBgn0085371.1.mrna1;Target=FBgn0085371.1 1 228 +
Chr1	stalkie_big_nohaplotig	exon	1124140	1124268	100	+	.	Parent=FBgn0085371.1.mrna1;Target=FBgn0085371.1 229 357 +
Chr1	stalkie_big_nohaplotig	exon	1125631	1125750	100	+	.	Parent=FBgn0085371.1.mrna1;Target=FBgn0085371.1 358 477 +
Chr1	stalkie_big_nohaplotig	exon	1126208	1126306	100	+	.	Parent=FBgn0085371.1.mrna1;Target=FBgn0085371.1 478 576 +
Chr1	stalkie_big_nohaplotig	exon	1126829	1126985	100	+	.	Parent=FBgn0085371.1.mrna1;Target=FBgn0085371.1 577 733 +
Chr1	stalkie_big_nohaplotig	exon	1130441	1130630	99	+	.	Parent=FBgn0085371.1.mrna1;Target=FBgn0085371.1 734 923 +
Chr1	stalkie_big_nohaplotig	exon	1132669	1132812	99	+	.	Parent=FBgn0085371.1.mrna1;Target=FBgn0085371.1 924 1067 +
Chr1	stalkie_big_nohaplotig	exon	1133533	1133652	100	+	.	Parent=FBgn0085371.1.mrna1;Target=FBgn0085371.1 1068 1187 +
Chr1	stalkie_big_nohaplotig	exon	1136114	1136371	100	+	.	Parent=FBgn0085371.1.mrna1;Target=FBgn0085371.1 1188 1445 +
Chr1	stalkie_big_nohaplotig	exon	1136647	1136755	100	+	.	Parent=FBgn0085371.1.mrna1;Target=FBgn0085371.1 1446 1554 +
Chr1	stalkie_big_nohaplotig	CDS	1123783	1124010	.	+	0	Parent=FBgn0085371.1.mrna1;Target=FBgn0085371.1 1 228 +
Chr1	stalkie_big_nohaplotig	CDS	1124140	1124268	.	+	0	Parent=FBgn0085371.1.mrna1;Target=FBgn0085371.1 229 357 +
Chr1	stalkie_big_nohaplotig	CDS	1125631	1125750	.	+	0	Parent=FBgn0085371.1.mrna1;Target=FBgn0085371.1 358 477 +
Chr1	stalkie_big_nohaplotig	CDS	1126208	1126306	.	+	0	Parent=FBgn0085371.1.mrna1;Target=FBgn0085371.1 478 576 +
Chr1	stalkie_big_nohaplotig	CDS	1126829	1126985	.	+	0	Parent=FBgn0085371.1.mrna1;Target=FBgn0085371.1 577 733 +
Chr1	stalkie_big_nohaplotig	CDS	1130441	1130630	.	+	2	Parent=FBgn0085371.1.mrna1;Target=FBgn0085371.1 734 923 +
Chr1	stalkie_big_nohaplotig	CDS	1132669	1132812	.	+	1	Parent=FBgn0085371.1.mrna1;Target=FBgn0085371.1 924 1067 +
Chr1	stalkie_big_nohaplotig	CDS	1133533	1133652	.	+	1	Parent=FBgn0085371.1.mrna1;Target=FBgn0085371.1 1068 1187 +
Chr1	stalkie_big_nohaplotig	CDS	1136114	1136371	.	+	1	Parent=FBgn0085371.1.mrna1;Target=FBgn0085371.1 1188 1445 +
Chr1	stalkie_big_nohaplotig	CDS	1136647	1136755	.	+	1	Parent=FBgn0085371.1.mrna1;Target=FBgn0085371.1 1446 1554 +
Chr1	gffcl	locus	1155889	1158955	.	+	.	ID=RLOC_00005103;geneIDs=comp133956_c0_seq1.path1;transcripts=comp133956_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1155889	1158955	.	+	.	ID=comp133956_c0_seq1.mrna1;geneID=comp133956_c0_seq1.path1;Name=comp133956_c0_seq1;Dir=sensecoverage=99.6;identity=99.6;matches=567;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005103
Chr1	stalkie_big_nohaplotig	exon	1155889	1156032	100	+	.	Parent=comp133956_c0_seq1.mrna1;Target=comp133956_c0_seq1 2 145 +
Chr1	stalkie_big_nohaplotig	exon	1158531	1158955	99	+	.	Parent=comp133956_c0_seq1.mrna1;Target=comp133956_c0_seq1 146 570 +
Chr1	stalkie_big_nohaplotig	CDS	1155920	1156032	.	+	0	Parent=comp133956_c0_seq1.mrna1;Target=comp133956_c0_seq1 33 145 +
Chr1	stalkie_big_nohaplotig	CDS	1158531	1158534	.	+	1	Parent=comp133956_c0_seq1.mrna1;Target=comp133956_c0_seq1 146 149 +
Chr1	gffcl	locus	1173352	1174266	.	-	.	ID=RLOC_00005104;geneIDs=comp157687_c0_seq1.path1;transcripts=comp157687_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1173352	1174266	.	-	.	ID=comp157687_c0_seq1.mrna1;geneID=comp157687_c0_seq1.path1;Name=comp157687_c0_seq1;Dir=sensecoverage=97.0;identity=98.6;matches=575;mismatches=6;indels=2;unknowns=0;Target=comp157687_c0_seq1 121 405 +;locus=RLOC_00005104
Chr1	stalkie_big_nohaplotig	exon	1173352	1173822	99	-	.	Parent=comp157687_c0_seq1.mrna1;Target=comp157687_c0_seq1 119 589 +
Chr1	stalkie_big_nohaplotig	exon	1174157	1174266	96	-	.	Parent=comp157687_c0_seq1.mrna1;Target=comp157687_c0_seq1 7 118 +
Chr1	stalkie_big_nohaplotig	CDS	1173536	1173820	.	-	0	Parent=comp157687_c0_seq1.mrna1
Chr1	gffcl	locus	1195440	1197524	.	+	.	ID=RLOC_00005105;geneIDs=FBgn0052072.1.path1;transcripts=FBgn0052072.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1195440	1197524	.	+	.	ID=FBgn0052072.1.mrna1;geneID=FBgn0052072.1.path1;Name=FBgn0052072.1;Dir=sensecoverage=100.0;identity=99.5;matches=821;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005105
Chr1	stalkie_big_nohaplotig	exon	1195440	1195633	99	+	.	Parent=FBgn0052072.1.mrna1;Target=FBgn0052072.1 1 194 +
Chr1	stalkie_big_nohaplotig	exon	1195705	1195867	99	+	.	Parent=FBgn0052072.1.mrna1;Target=FBgn0052072.1 195 357 +
Chr1	stalkie_big_nohaplotig	exon	1195919	1196090	98	+	.	Parent=FBgn0052072.1.mrna1;Target=FBgn0052072.1 358 529 +
Chr1	stalkie_big_nohaplotig	exon	1197148	1197275	100	+	.	Parent=FBgn0052072.1.mrna1;Target=FBgn0052072.1 530 657 +
Chr1	stalkie_big_nohaplotig	exon	1197357	1197524	100	+	.	Parent=FBgn0052072.1.mrna1;Target=FBgn0052072.1 658 825 +
Chr1	stalkie_big_nohaplotig	CDS	1195440	1195633	.	+	0	Parent=FBgn0052072.1.mrna1;Target=FBgn0052072.1 1 194 +
Chr1	stalkie_big_nohaplotig	CDS	1195705	1195867	.	+	1	Parent=FBgn0052072.1.mrna1;Target=FBgn0052072.1 195 357 +
Chr1	stalkie_big_nohaplotig	CDS	1195919	1196090	.	+	0	Parent=FBgn0052072.1.mrna1;Target=FBgn0052072.1 358 529 +
Chr1	stalkie_big_nohaplotig	CDS	1197148	1197275	.	+	2	Parent=FBgn0052072.1.mrna1;Target=FBgn0052072.1 530 657 +
Chr1	stalkie_big_nohaplotig	CDS	1197357	1197524	.	+	0	Parent=FBgn0052072.1.mrna1;Target=FBgn0052072.1 658 825 +
Chr1	gffcl	locus	1200866	1202014	.	-	.	ID=RLOC_00005106;geneIDs=FBgn0035254.1.path1;transcripts=FBgn0035254.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1200866	1202014	.	-	.	ID=FBgn0035254.1.mrna1;geneID=FBgn0035254.1.path1;Name=FBgn0035254.1;Dir=sensecoverage=100.0;identity=99.4;matches=933;mismatches=6;indels=0;unknowns=0;locus=RLOC_00005106
Chr1	stalkie_big_nohaplotig	exon	1200866	1201008	97	-	.	Parent=FBgn0035254.1.mrna1;Target=FBgn0035254.1 797 939 +
Chr1	stalkie_big_nohaplotig	exon	1201082	1201580	99	-	.	Parent=FBgn0035254.1.mrna1;Target=FBgn0035254.1 298 796 +
Chr1	stalkie_big_nohaplotig	exon	1201649	1201763	100	-	.	Parent=FBgn0035254.1.mrna1;Target=FBgn0035254.1 183 297 +
Chr1	stalkie_big_nohaplotig	exon	1201833	1202014	98	-	.	Parent=FBgn0035254.1.mrna1;Target=FBgn0035254.1 1 182 +
Chr1	stalkie_big_nohaplotig	CDS	1200866	1201008	.	-	2	Parent=FBgn0035254.1.mrna1;Target=FBgn0035254.1 797 939 +
Chr1	stalkie_big_nohaplotig	CDS	1201082	1201580	.	-	0	Parent=FBgn0035254.1.mrna1;Target=FBgn0035254.1 298 796 +
Chr1	stalkie_big_nohaplotig	CDS	1201649	1201763	.	-	1	Parent=FBgn0035254.1.mrna1;Target=FBgn0035254.1 183 297 +
Chr1	stalkie_big_nohaplotig	CDS	1201833	1202014	.	-	0	Parent=FBgn0035254.1.mrna1;Target=FBgn0035254.1 1 182 +
Chr1	gffcl	locus	1202252	1202803	.	+	.	ID=RLOC_00005107;geneIDs=FBgn0011787.1.path1;transcripts=FBgn0011787.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1202252	1202803	.	+	.	ID=FBgn0011787.1.mrna1;geneID=FBgn0011787.1.path1;Name=FBgn0011787.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=548;mismatches=4;indels=0;unknowns=0;Target=FBgn0011787.1 552 1 .;locus=RLOC_00005107
Chr1	stalkie_big_nohaplotig	exon	1202252	1202803	99	+	.	Parent=FBgn0011787.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	1202252	1202803	.	+	0	Parent=FBgn0011787.1.mrna1
Chr1	gffcl	locus	1205321	1211202	.	+	.	ID=RLOC_00005108;geneIDs=FBgn0035941.1.path1;transcripts=FBgn0035941.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1205321	1211202	.	+	.	ID=FBgn0035941.1.mrna1;geneID=FBgn0035941.1.path1;Name=FBgn0035941.1;Dir=sensecoverage=100.0;identity=99.4;matches=1229;mismatches=7;indels=0;unknowns=0;locus=RLOC_00005108
Chr1	stalkie_big_nohaplotig	exon	1205321	1205525	99	+	.	Parent=FBgn0035941.1.mrna1;Target=FBgn0035941.1 1 205 +
Chr1	stalkie_big_nohaplotig	exon	1209990	1210148	100	+	.	Parent=FBgn0035941.1.mrna1;Target=FBgn0035941.1 206 364 +
Chr1	stalkie_big_nohaplotig	exon	1210220	1210307	100	+	.	Parent=FBgn0035941.1.mrna1;Target=FBgn0035941.1 365 452 +
Chr1	stalkie_big_nohaplotig	exon	1210419	1211202	99	+	.	Parent=FBgn0035941.1.mrna1;Target=FBgn0035941.1 453 1236 +
Chr1	stalkie_big_nohaplotig	CDS	1205321	1205525	.	+	0	Parent=FBgn0035941.1.mrna1;Target=FBgn0035941.1 1 205 +
Chr1	stalkie_big_nohaplotig	CDS	1209990	1210148	.	+	2	Parent=FBgn0035941.1.mrna1;Target=FBgn0035941.1 206 364 +
Chr1	stalkie_big_nohaplotig	CDS	1210220	1210307	.	+	2	Parent=FBgn0035941.1.mrna1;Target=FBgn0035941.1 365 452 +
Chr1	stalkie_big_nohaplotig	CDS	1210419	1211202	.	+	1	Parent=FBgn0035941.1.mrna1;Target=FBgn0035941.1 453 1236 +
Chr1	gffcl	locus	1223471	1223875	.	+	.	ID=RLOC_00005110;geneIDs=FBgn0050148.1.path1;transcripts=FBgn0050148.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1223471	1223875	.	+	.	ID=FBgn0050148.1.mrna1;geneID=FBgn0050148.1.path1;Name=FBgn0050148.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=402;mismatches=3;indels=0;unknowns=0;Target=FBgn0050148.1 405 1 .;locus=RLOC_00005110
Chr1	stalkie_big_nohaplotig	exon	1223471	1223875	99	+	.	Parent=FBgn0050148.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	1223471	1223875	.	+	0	Parent=FBgn0050148.1.mrna1
Chr1	gffcl	locus	1272100	1281690	.	-	.	ID=RLOC_00005111;geneIDs=FBgn0035610.1.path1;transcripts=FBgn0035610.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1272100	1281690	.	-	.	ID=FBgn0035610.1.mrna1;geneID=FBgn0035610.1.path1;Name=FBgn0035610.1;Dir=sensecoverage=100.0;identity=99.6;matches=1659;mismatches=6;indels=0;unknowns=0;locus=RLOC_00005111
Chr1	stalkie_big_nohaplotig	exon	1272100	1272750	99	-	.	Parent=FBgn0035610.1.mrna1;Target=FBgn0035610.1 1015 1665 +
Chr1	stalkie_big_nohaplotig	exon	1274691	1274882	98	-	.	Parent=FBgn0035610.1.mrna1;Target=FBgn0035610.1 823 1014 +
Chr1	stalkie_big_nohaplotig	exon	1275096	1275322	99	-	.	Parent=FBgn0035610.1.mrna1;Target=FBgn0035610.1 596 822 +
Chr1	stalkie_big_nohaplotig	exon	1275381	1275502	100	-	.	Parent=FBgn0035610.1.mrna1;Target=FBgn0035610.1 474 595 +
Chr1	stalkie_big_nohaplotig	exon	1277996	1278144	100	-	.	Parent=FBgn0035610.1.mrna1;Target=FBgn0035610.1 325 473 +
Chr1	stalkie_big_nohaplotig	exon	1280997	1281199	100	-	.	Parent=FBgn0035610.1.mrna1;Target=FBgn0035610.1 122 324 +
Chr1	stalkie_big_nohaplotig	exon	1281570	1281690	100	-	.	Parent=FBgn0035610.1.mrna1;Target=FBgn0035610.1 1 121 +
Chr1	stalkie_big_nohaplotig	CDS	1272100	1272750	.	-	0	Parent=FBgn0035610.1.mrna1;Target=FBgn0035610.1 1015 1665 +
Chr1	stalkie_big_nohaplotig	CDS	1274691	1274882	.	-	0	Parent=FBgn0035610.1.mrna1;Target=FBgn0035610.1 823 1014 +
Chr1	stalkie_big_nohaplotig	CDS	1275096	1275322	.	-	2	Parent=FBgn0035610.1.mrna1;Target=FBgn0035610.1 596 822 +
Chr1	stalkie_big_nohaplotig	CDS	1275381	1275502	.	-	1	Parent=FBgn0035610.1.mrna1;Target=FBgn0035610.1 474 595 +
Chr1	stalkie_big_nohaplotig	CDS	1277996	1278144	.	-	0	Parent=FBgn0035610.1.mrna1;Target=FBgn0035610.1 325 473 +
Chr1	stalkie_big_nohaplotig	CDS	1280997	1281199	.	-	2	Parent=FBgn0035610.1.mrna1;Target=FBgn0035610.1 122 324 +
Chr1	stalkie_big_nohaplotig	CDS	1281570	1281690	.	-	0	Parent=FBgn0035610.1.mrna1;Target=FBgn0035610.1 1 121 +
Chr1	gffcl	locus	1305581	1306486	.	+	.	ID=RLOC_00005112;geneIDs=comp149203_c0_seq1.path1;transcripts=comp149203_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1305581	1306486	.	+	.	ID=comp149203_c0_seq1.mrna1;geneID=comp149203_c0_seq1.path1;Name=comp149203_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=715;mismatches=5;indels=0;unknowns=0;Target=comp149203_c0_seq1 79 288 +;locus=RLOC_00005112
Chr1	stalkie_big_nohaplotig	exon	1305581	1305939	98	+	.	Parent=comp149203_c0_seq1.mrna1;Target=comp149203_c0_seq1 1 359 +
Chr1	stalkie_big_nohaplotig	exon	1305999	1306050	100	+	.	Parent=comp149203_c0_seq1.mrna1;Target=comp149203_c0_seq1 360 411 +
Chr1	stalkie_big_nohaplotig	exon	1306108	1306175	100	+	.	Parent=comp149203_c0_seq1.mrna1;Target=comp149203_c0_seq1 412 479 +
Chr1	stalkie_big_nohaplotig	exon	1306246	1306486	100	+	.	Parent=comp149203_c0_seq1.mrna1;Target=comp149203_c0_seq1 480 720 +
Chr1	stalkie_big_nohaplotig	CDS	1305659	1305868	.	+	0	Parent=comp149203_c0_seq1.mrna1
Chr1	gffcl	locus	1327844	1335544	.	-	.	ID=RLOC_00005113;geneIDs=comp149853_c0_seq1.path1;transcripts=comp149853_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1327844	1335544	.	-	.	ID=comp149853_c0_seq1.mrna1;geneID=comp149853_c0_seq1.path1;Name=comp149853_c0_seq1;Dir=sensecoverage=99.9;identity=99.8;matches=921;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005113
Chr1	stalkie_big_nohaplotig	exon	1327844	1328286	100	-	.	Parent=comp149853_c0_seq1.mrna1;Target=comp149853_c0_seq1 481 923 +
Chr1	stalkie_big_nohaplotig	exon	1330731	1331015	100	-	.	Parent=comp149853_c0_seq1.mrna1;Target=comp149853_c0_seq1 196 480 +
Chr1	stalkie_big_nohaplotig	exon	1335350	1335544	98	-	.	Parent=comp149853_c0_seq1.mrna1;Target=comp149853_c0_seq1 1 195 +
Chr1	stalkie_big_nohaplotig	CDS	1328246	1328286	.	-	2	Parent=comp149853_c0_seq1.mrna1;Target=comp149853_c0_seq1 481 521 +
Chr1	stalkie_big_nohaplotig	CDS	1330731	1331015	.	-	2	Parent=comp149853_c0_seq1.mrna1;Target=comp149853_c0_seq1 196 480 +
Chr1	stalkie_big_nohaplotig	CDS	1335350	1335476	.	-	0	Parent=comp149853_c0_seq1.mrna1;Target=comp149853_c0_seq1 69 195 +
Chr1	gffcl	locus	1348014	1382145	.	-	.	ID=RLOC_00005114;geneIDs=FBgn0035612.1.path1;transcripts=FBgn0035612.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1348014	1382145	.	-	.	ID=FBgn0035612.1.mrna1;geneID=FBgn0035612.1.path1;Name=FBgn0035612.1;Dir=sensecoverage=100.0;identity=99.9;matches=3331;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005114
Chr1	stalkie_big_nohaplotig	exon	1348014	1350013	100	-	.	Parent=FBgn0035612.1.mrna1;Target=FBgn0035612.1 1334 3333 +
Chr1	stalkie_big_nohaplotig	exon	1350103	1350288	100	-	.	Parent=FBgn0035612.1.mrna1;Target=FBgn0035612.1 1148 1333 +
Chr1	stalkie_big_nohaplotig	exon	1350474	1350479	100	-	.	Parent=FBgn0035612.1.mrna1;Target=FBgn0035612.1 1142 1147 +
Chr1	stalkie_big_nohaplotig	exon	1352659	1353090	100	-	.	Parent=FBgn0035612.1.mrna1;Target=FBgn0035612.1 710 1141 +
Chr1	stalkie_big_nohaplotig	exon	1353168	1353402	100	-	.	Parent=FBgn0035612.1.mrna1;Target=FBgn0035612.1 475 709 +
Chr1	stalkie_big_nohaplotig	exon	1353470	1353780	99	-	.	Parent=FBgn0035612.1.mrna1;Target=FBgn0035612.1 164 474 +
Chr1	stalkie_big_nohaplotig	exon	1355437	1355566	99	-	.	Parent=FBgn0035612.1.mrna1;Target=FBgn0035612.1 34 163 +
Chr1	stalkie_big_nohaplotig	exon	1382113	1382145	100	-	.	Parent=FBgn0035612.1.mrna1;Target=FBgn0035612.1 1 33 +
Chr1	stalkie_big_nohaplotig	CDS	1348014	1350013	.	-	2	Parent=FBgn0035612.1.mrna1;Target=FBgn0035612.1 1334 3333 +
Chr1	stalkie_big_nohaplotig	CDS	1350103	1350288	.	-	2	Parent=FBgn0035612.1.mrna1;Target=FBgn0035612.1 1148 1333 +
Chr1	stalkie_big_nohaplotig	CDS	1350474	1350479	.	-	2	Parent=FBgn0035612.1.mrna1;Target=FBgn0035612.1 1142 1147 +
Chr1	stalkie_big_nohaplotig	CDS	1352659	1353090	.	-	2	Parent=FBgn0035612.1.mrna1;Target=FBgn0035612.1 710 1141 +
Chr1	stalkie_big_nohaplotig	CDS	1353168	1353402	.	-	0	Parent=FBgn0035612.1.mrna1;Target=FBgn0035612.1 475 709 +
Chr1	stalkie_big_nohaplotig	CDS	1353470	1353780	.	-	2	Parent=FBgn0035612.1.mrna1;Target=FBgn0035612.1 164 474 +
Chr1	stalkie_big_nohaplotig	CDS	1355437	1355566	.	-	0	Parent=FBgn0035612.1.mrna1;Target=FBgn0035612.1 34 163 +
Chr1	stalkie_big_nohaplotig	CDS	1382113	1382145	.	-	0	Parent=FBgn0035612.1.mrna1;Target=FBgn0035612.1 1 33 +
Chr1	gffcl	locus	1424616	1424929	.	+	.	ID=RLOC_00005115;geneIDs=comp135309_c0_seq1.path1;transcripts=comp135309_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1424616	1424929	.	+	.	ID=comp135309_c0_seq1.mrna1;geneID=comp135309_c0_seq1.path1;Name=comp135309_c0_seq1;Dir=indeterminatecoverage=99.7;identity=93.7;matches=298;mismatches=14;indels=6;unknowns=0;Target=comp135309_c0_seq1 317 2 .;CDS_Target=comp135309_c0_seq1 79 62 .;locus=RLOC_00005115
Chr1	stalkie_big_nohaplotig	exon	1424616	1424929	93	+	.	Parent=comp135309_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	1424676	1424689	.	+	0	Parent=comp135309_c0_seq1.mrna1
Chr1	gffcl	locus	1428352	1429408	.	+	.	ID=RLOC_00005116;geneIDs=FBgn0035251.2.path1;transcripts=FBgn0035251.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1428352	1429408	.	+	.	ID=FBgn0035251.2.mrna1;geneID=FBgn0035251.2.path1;Name=FBgn0035251.2;Dir=sensecoverage=100.0;identity=99.9;matches=938;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005116
Chr1	stalkie_big_nohaplotig	exon	1428352	1428529	99	+	.	Parent=FBgn0035251.2.mrna1;Target=FBgn0035251.2 1 178 +
Chr1	stalkie_big_nohaplotig	exon	1428589	1428739	100	+	.	Parent=FBgn0035251.2.mrna1;Target=FBgn0035251.2 179 329 +
Chr1	stalkie_big_nohaplotig	exon	1428799	1429408	100	+	.	Parent=FBgn0035251.2.mrna1;Target=FBgn0035251.2 330 939 +
Chr1	stalkie_big_nohaplotig	CDS	1428352	1428529	.	+	0	Parent=FBgn0035251.2.mrna1;Target=FBgn0035251.2 1 178 +
Chr1	stalkie_big_nohaplotig	CDS	1428589	1428739	.	+	2	Parent=FBgn0035251.2.mrna1;Target=FBgn0035251.2 179 329 +
Chr1	stalkie_big_nohaplotig	CDS	1428799	1429408	.	+	1	Parent=FBgn0035251.2.mrna1;Target=FBgn0035251.2 330 939 +
Chr1	gffcl	locus	1430149	1437520	.	-	.	ID=RLOC_00005117;geneIDs=FBgn0025712.1.path1;transcripts=FBgn0025712.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1430149	1437520	.	-	.	ID=FBgn0025712.1.mrna1;geneID=FBgn0025712.1.path1;Name=FBgn0025712.1;Dir=sensecoverage=100.0;identity=99.8;matches=491;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005117
Chr1	stalkie_big_nohaplotig	exon	1430149	1430214	98	-	.	Parent=FBgn0025712.1.mrna1;Target=FBgn0025712.1 427 492 +
Chr1	stalkie_big_nohaplotig	exon	1430284	1430435	100	-	.	Parent=FBgn0025712.1.mrna1;Target=FBgn0025712.1 275 426 +
Chr1	stalkie_big_nohaplotig	exon	1430524	1430662	100	-	.	Parent=FBgn0025712.1.mrna1;Target=FBgn0025712.1 136 274 +
Chr1	stalkie_big_nohaplotig	exon	1437386	1437520	100	-	.	Parent=FBgn0025712.1.mrna1;Target=FBgn0025712.1 1 135 +
Chr1	stalkie_big_nohaplotig	CDS	1430149	1430214	.	-	0	Parent=FBgn0025712.1.mrna1;Target=FBgn0025712.1 427 492 +
Chr1	stalkie_big_nohaplotig	CDS	1430284	1430435	.	-	2	Parent=FBgn0025712.1.mrna1;Target=FBgn0025712.1 275 426 +
Chr1	stalkie_big_nohaplotig	CDS	1430524	1430662	.	-	0	Parent=FBgn0025712.1.mrna1;Target=FBgn0025712.1 136 274 +
Chr1	stalkie_big_nohaplotig	CDS	1437386	1437520	.	-	0	Parent=FBgn0025712.1.mrna1;Target=FBgn0025712.1 1 135 +
Chr1	gffcl	locus	1439876	1440966	.	+	.	ID=RLOC_00005118;geneIDs=FBgn0035249.1.path1;transcripts=FBgn0035249.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1439876	1440966	.	+	.	ID=FBgn0035249.1.mrna1;geneID=FBgn0035249.1.path1;Name=FBgn0035249.1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=1075;mismatches=16;indels=1;unknowns=0;Target=FBgn0035249.1 1092 1 .;CDS_Target=FBgn0035249.1 146 3 .;locus=RLOC_00005118
Chr1	stalkie_big_nohaplotig	exon	1439876	1440966	98	+	.	Parent=FBgn0035249.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	1439878	1440020	.	+	0	Parent=FBgn0035249.1.mrna1
Chr1	gffcl	locus	1441049	1441480	.	-	.	ID=RLOC_00005119;geneIDs=FBgn0035248.1.path1;transcripts=FBgn0035248.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1441049	1441480	.	-	.	ID=FBgn0035248.1.mrna1;geneID=FBgn0035248.1.path1;Name=FBgn0035248.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=431;mismatches=1;indels=0;unknowns=0;Target=FBgn0035248.1 432 1 .;locus=RLOC_00005119
Chr1	stalkie_big_nohaplotig	exon	1441049	1441480	99	-	.	Parent=FBgn0035248.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	1441049	1441480	.	-	0	Parent=FBgn0035248.1.mrna1
Chr1	gffcl	locus	1442049	1445837	.	+	.	ID=RLOC_00005120;geneIDs=FBgn0025725.1.path1;transcripts=FBgn0025725.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1442049	1445837	.	+	.	ID=FBgn0025725.1.mrna1;geneID=FBgn0025725.1.path1;Name=FBgn0025725.1;Dir=sensecoverage=100.0;identity=99.4;matches=3699;mismatches=24;indels=0;unknowns=0;locus=RLOC_00005120
Chr1	stalkie_big_nohaplotig	exon	1442049	1443024	99	+	.	Parent=FBgn0025725.1.mrna1;Target=FBgn0025725.1 1 976 +
Chr1	stalkie_big_nohaplotig	exon	1443091	1445837	99	+	.	Parent=FBgn0025725.1.mrna1;Target=FBgn0025725.1 977 3723 +
Chr1	stalkie_big_nohaplotig	CDS	1442049	1443024	.	+	0	Parent=FBgn0025725.1.mrna1;Target=FBgn0025725.1 1 976 +
Chr1	stalkie_big_nohaplotig	CDS	1443091	1445837	.	+	2	Parent=FBgn0025725.1.mrna1;Target=FBgn0025725.1 977 3723 +
Chr1	gffcl	locus	1448053	1448697	.	-	.	ID=RLOC_00005121;geneIDs=FBgn0013753.1.path1;transcripts=FBgn0013753.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1448053	1448697	.	-	.	ID=FBgn0013753.1.mrna1;geneID=FBgn0013753.1.path1;Name=FBgn0013753.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=643;mismatches=2;indels=0;unknowns=0;Target=FBgn0013753.1 645 1 .;locus=RLOC_00005121
Chr1	stalkie_big_nohaplotig	exon	1448053	1448697	99	-	.	Parent=FBgn0013753.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	1448053	1448697	.	-	0	Parent=FBgn0013753.1.mrna1
Chr1	gffcl	locus	1450679	1451220	.	+	.	ID=RLOC_00005122;geneIDs=comp144591_c0_seq1.path1;transcripts=comp144591_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1450679	1451220	.	+	.	ID=comp144591_c0_seq1.mrna1;geneID=comp144591_c0_seq1.path1;Name=comp144591_c0_seq1;Dir=indeterminatecoverage=96.8;identity=98.5;matches=535;mismatches=3;indels=5;unknowns=0;Target=comp144591_c0_seq1 554 16 .;CDS_Target=comp144591_c0_seq1 133 17 .;locus=RLOC_00005122
Chr1	stalkie_big_nohaplotig	exon	1450679	1451220	98	+	.	Parent=comp144591_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	1450680	1450796	.	+	0	Parent=comp144591_c0_seq1.mrna1
Chr1	gffcl	locus	1452642	1453335	.	-	.	ID=RLOC_00005123;geneIDs=comp154411_c0_seq1.path1;transcripts=comp154411_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1452642	1453335	.	-	.	ID=comp154411_c0_seq1.mrna1;geneID=comp154411_c0_seq1.path1;Name=comp154411_c0_seq1;Dir=indeterminatecoverage=91.9;identity=99.9;matches=693;mismatches=1;indels=0;unknowns=0;Target=comp154411_c0_seq1 694 1 .;CDS_Target=comp154411_c0_seq1 554 417 .;locus=RLOC_00005123
Chr1	stalkie_big_nohaplotig	exon	1452642	1453335	99	-	.	Parent=comp154411_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	1452782	1452919	.	-	0	Parent=comp154411_c0_seq1.mrna1
Chr1	gffcl	locus	1456463	1495894	.	-	.	ID=RLOC_00005124;geneIDs=FBgn0020412.1.path1;transcripts=FBgn0020412.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1456463	1495894	.	-	.	ID=FBgn0020412.1.mrna1;geneID=FBgn0020412.1.path1;Name=FBgn0020412.1;Dir=sensecoverage=100.0;identity=99.5;matches=4103;mismatches=10;indels=9;unknowns=0;locus=RLOC_00005124
Chr1	stalkie_big_nohaplotig	exon	1456463	1458254	99	-	.	Parent=FBgn0020412.1.mrna1;Target=FBgn0020412.1 2328 4116 +
Chr1	stalkie_big_nohaplotig	exon	1458326	1458774	99	-	.	Parent=FBgn0020412.1.mrna1;Target=FBgn0020412.1 1879 2327 +
Chr1	stalkie_big_nohaplotig	exon	1458888	1459180	99	-	.	Parent=FBgn0020412.1.mrna1;Target=FBgn0020412.1 1586 1878 +
Chr1	stalkie_big_nohaplotig	exon	1459250	1459492	100	-	.	Parent=FBgn0020412.1.mrna1;Target=FBgn0020412.1 1343 1585 +
Chr1	stalkie_big_nohaplotig	exon	1459567	1459839	100	-	.	Parent=FBgn0020412.1.mrna1;Target=FBgn0020412.1 1070 1342 +
Chr1	stalkie_big_nohaplotig	exon	1459905	1459989	100	-	.	Parent=FBgn0020412.1.mrna1;Target=FBgn0020412.1 985 1069 +
Chr1	stalkie_big_nohaplotig	exon	1468641	1468774	99	-	.	Parent=FBgn0020412.1.mrna1;Target=FBgn0020412.1 851 984 +
Chr1	stalkie_big_nohaplotig	exon	1470138	1470206	100	-	.	Parent=FBgn0020412.1.mrna1;Target=FBgn0020412.1 782 850 +
Chr1	stalkie_big_nohaplotig	exon	1495114	1495894	99	-	.	Parent=FBgn0020412.1.mrna1;Target=FBgn0020412.1 1 781 +
Chr1	stalkie_big_nohaplotig	CDS	1456463	1458254	.	-	1	Parent=FBgn0020412.1.mrna1;Target=FBgn0020412.1 2328 4116 +
Chr1	stalkie_big_nohaplotig	CDS	1458326	1458774	.	-	0	Parent=FBgn0020412.1.mrna1;Target=FBgn0020412.1 1879 2327 +
Chr1	stalkie_big_nohaplotig	CDS	1458888	1459180	.	-	2	Parent=FBgn0020412.1.mrna1;Target=FBgn0020412.1 1586 1878 +
Chr1	stalkie_big_nohaplotig	CDS	1459250	1459492	.	-	2	Parent=FBgn0020412.1.mrna1;Target=FBgn0020412.1 1343 1585 +
Chr1	stalkie_big_nohaplotig	CDS	1459567	1459839	.	-	2	Parent=FBgn0020412.1.mrna1;Target=FBgn0020412.1 1070 1342 +
Chr1	stalkie_big_nohaplotig	CDS	1459905	1459989	.	-	0	Parent=FBgn0020412.1.mrna1;Target=FBgn0020412.1 985 1069 +
Chr1	stalkie_big_nohaplotig	CDS	1468641	1468774	.	-	2	Parent=FBgn0020412.1.mrna1;Target=FBgn0020412.1 851 984 +
Chr1	stalkie_big_nohaplotig	CDS	1470138	1470206	.	-	2	Parent=FBgn0020412.1.mrna1;Target=FBgn0020412.1 782 850 +
Chr1	stalkie_big_nohaplotig	CDS	1495114	1495894	.	-	0	Parent=FBgn0020412.1.mrna1;Target=FBgn0020412.1 1 781 +
Chr1	gffcl	locus	1503932	1504866	.	-	.	ID=RLOC_00005125;geneIDs=FBgn0036125.path1;transcripts=FBgn0036125.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1503932	1504866	.	-	.	ID=FBgn0036125.mrna1;geneID=FBgn0036125.path1;Name=FBgn0036125;Dir=sensecoverage=99.9;identity=99.4;matches=867;mismatches=5;indels=0;unknowns=0;locus=RLOC_00005125
Chr1	stalkie_big_nohaplotig	exon	1503932	1504641	99	-	.	Parent=FBgn0036125.mrna1;Target=FBgn0036125 164 873 +
Chr1	stalkie_big_nohaplotig	exon	1504705	1504866	99	-	.	Parent=FBgn0036125.mrna1;Target=FBgn0036125 2 163 +
Chr1	stalkie_big_nohaplotig	CDS	1503932	1504641	.	-	2	Parent=FBgn0036125.mrna1;Target=FBgn0036125 164 873 +
Chr1	stalkie_big_nohaplotig	CDS	1504705	1504864	.	-	0	Parent=FBgn0036125.mrna1;Target=FBgn0036125 4 163 +
Chr1	gffcl	locus	1506144	1507576	.	.	.	ID=RLOC_00005126;geneIDs=comp143009_c0_seq1.path1,comp148258_c0_seq1.path1;transcripts=comp143009_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1506144	1507245	.	+	.	ID=comp143009_c0_seq1.mrna1;geneID=comp143009_c0_seq1.path1;Name=comp143009_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=937;mismatches=1;indels=2;unknowns=0;locus=RLOC_00005126
Chr1	stalkie_big_nohaplotig	exon	1506144	1506667	99	+	.	Parent=comp143009_c0_seq1.mrna1;Target=comp143009_c0_seq1 1 524 +
Chr1	stalkie_big_nohaplotig	exon	1506831	1507245	99	+	.	Parent=comp143009_c0_seq1.mrna1;Target=comp143009_c0_seq1 525 939 +
Chr1	stalkie_big_nohaplotig	CDS	1506619	1506667	.	+	0	Parent=comp143009_c0_seq1.mrna1;Target=comp143009_c0_seq1 476 524 +
Chr1	stalkie_big_nohaplotig	CDS	1506831	1506880	.	+	2	Parent=comp143009_c0_seq1.mrna1;Target=comp143009_c0_seq1 525 574 +
Chr1	gffcl	locus	1509957	1512070	.	+	.	ID=RLOC_00005127;geneIDs=FBgn0261112.1.path1;transcripts=FBgn0261112.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1509957	1512070	.	+	.	ID=FBgn0261112.1.mrna1;geneID=FBgn0261112.1.path1;Name=FBgn0261112.1;Dir=sensecoverage=100.0;identity=99.4;matches=1708;mismatches=11;indels=0;unknowns=0;locus=RLOC_00005127
Chr1	stalkie_big_nohaplotig	exon	1509957	1510177	99	+	.	Parent=FBgn0261112.1.mrna1;Target=FBgn0261112.1 1 221 +
Chr1	stalkie_big_nohaplotig	exon	1510230	1510394	100	+	.	Parent=FBgn0261112.1.mrna1;Target=FBgn0261112.1 222 386 +
Chr1	stalkie_big_nohaplotig	exon	1510451	1510823	98	+	.	Parent=FBgn0261112.1.mrna1;Target=FBgn0261112.1 387 759 +
Chr1	stalkie_big_nohaplotig	exon	1510886	1511021	100	+	.	Parent=FBgn0261112.1.mrna1;Target=FBgn0261112.1 760 895 +
Chr1	stalkie_big_nohaplotig	exon	1511074	1511204	99	+	.	Parent=FBgn0261112.1.mrna1;Target=FBgn0261112.1 896 1026 +
Chr1	stalkie_big_nohaplotig	exon	1511260	1511593	99	+	.	Parent=FBgn0261112.1.mrna1;Target=FBgn0261112.1 1027 1360 +
Chr1	stalkie_big_nohaplotig	exon	1511648	1511896	99	+	.	Parent=FBgn0261112.1.mrna1;Target=FBgn0261112.1 1361 1609 +
Chr1	stalkie_big_nohaplotig	exon	1511961	1512070	99	+	.	Parent=FBgn0261112.1.mrna1;Target=FBgn0261112.1 1610 1719 +
Chr1	stalkie_big_nohaplotig	CDS	1510110	1510177	.	+	0	Parent=FBgn0261112.1.mrna1;Target=FBgn0261112.1 154 221 +
Chr1	stalkie_big_nohaplotig	CDS	1510230	1510394	.	+	1	Parent=FBgn0261112.1.mrna1;Target=FBgn0261112.1 222 386 +
Chr1	stalkie_big_nohaplotig	CDS	1510451	1510823	.	+	1	Parent=FBgn0261112.1.mrna1;Target=FBgn0261112.1 387 759 +
Chr1	stalkie_big_nohaplotig	CDS	1510886	1511021	.	+	0	Parent=FBgn0261112.1.mrna1;Target=FBgn0261112.1 760 895 +
Chr1	stalkie_big_nohaplotig	CDS	1511074	1511204	.	+	2	Parent=FBgn0261112.1.mrna1;Target=FBgn0261112.1 896 1026 +
Chr1	stalkie_big_nohaplotig	CDS	1511260	1511593	.	+	0	Parent=FBgn0261112.1.mrna1;Target=FBgn0261112.1 1027 1360 +
Chr1	stalkie_big_nohaplotig	CDS	1511648	1511896	.	+	2	Parent=FBgn0261112.1.mrna1;Target=FBgn0261112.1 1361 1609 +
Chr1	stalkie_big_nohaplotig	CDS	1511961	1512070	.	+	2	Parent=FBgn0261112.1.mrna1;Target=FBgn0261112.1 1610 1719 +
Chr1	gffcl	locus	1513253	1513741	.	+	.	ID=RLOC_00005128;geneIDs=FBgn0036726.1.path1;transcripts=FBgn0036726.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1513253	1513741	.	+	.	ID=FBgn0036726.1.mrna1;geneID=FBgn0036726.1.path1;Name=FBgn0036726.1;Dir=sensecoverage=100.0;identity=100.0;matches=426;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005128
Chr1	stalkie_big_nohaplotig	exon	1513253	1513350	100	+	.	Parent=FBgn0036726.1.mrna1;Target=FBgn0036726.1 1 98 +
Chr1	stalkie_big_nohaplotig	exon	1513414	1513741	100	+	.	Parent=FBgn0036726.1.mrna1;Target=FBgn0036726.1 99 426 +
Chr1	stalkie_big_nohaplotig	CDS	1513253	1513350	.	+	0	Parent=FBgn0036726.1.mrna1;Target=FBgn0036726.1 1 98 +
Chr1	stalkie_big_nohaplotig	CDS	1513414	1513741	.	+	1	Parent=FBgn0036726.1.mrna1;Target=FBgn0036726.1 99 426 +
Chr1	gffcl	locus	1515841	1519393	.	-	.	ID=RLOC_00005129;geneIDs=FBgn0035630.1.path1;transcripts=FBgn0035630.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1515841	1519393	.	-	.	ID=FBgn0035630.1.mrna1;geneID=FBgn0035630.1.path1;Name=FBgn0035630.1;Dir=sensecoverage=100.0;identity=99.9;matches=1226;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005129
Chr1	stalkie_big_nohaplotig	exon	1515841	1515975	100	-	.	Parent=FBgn0035630.1.mrna1;Target=FBgn0035630.1 1093 1227 +
Chr1	stalkie_big_nohaplotig	exon	1516038	1516165	100	-	.	Parent=FBgn0035630.1.mrna1;Target=FBgn0035630.1 965 1092 +
Chr1	stalkie_big_nohaplotig	exon	1516562	1516694	100	-	.	Parent=FBgn0035630.1.mrna1;Target=FBgn0035630.1 832 964 +
Chr1	stalkie_big_nohaplotig	exon	1516751	1516843	100	-	.	Parent=FBgn0035630.1.mrna1;Target=FBgn0035630.1 739 831 +
Chr1	stalkie_big_nohaplotig	exon	1517056	1517277	100	-	.	Parent=FBgn0035630.1.mrna1;Target=FBgn0035630.1 517 738 +
Chr1	stalkie_big_nohaplotig	exon	1518402	1518564	100	-	.	Parent=FBgn0035630.1.mrna1;Target=FBgn0035630.1 354 516 +
Chr1	stalkie_big_nohaplotig	exon	1518624	1518760	99	-	.	Parent=FBgn0035630.1.mrna1;Target=FBgn0035630.1 217 353 +
Chr1	stalkie_big_nohaplotig	exon	1518833	1518930	100	-	.	Parent=FBgn0035630.1.mrna1;Target=FBgn0035630.1 119 216 +
Chr1	stalkie_big_nohaplotig	exon	1519276	1519393	100	-	.	Parent=FBgn0035630.1.mrna1;Target=FBgn0035630.1 1 118 +
Chr1	stalkie_big_nohaplotig	CDS	1515841	1515975	.	-	0	Parent=FBgn0035630.1.mrna1;Target=FBgn0035630.1 1093 1227 +
Chr1	stalkie_big_nohaplotig	CDS	1516038	1516165	.	-	2	Parent=FBgn0035630.1.mrna1;Target=FBgn0035630.1 965 1092 +
Chr1	stalkie_big_nohaplotig	CDS	1516562	1516694	.	-	0	Parent=FBgn0035630.1.mrna1;Target=FBgn0035630.1 832 964 +
Chr1	stalkie_big_nohaplotig	CDS	1516751	1516843	.	-	0	Parent=FBgn0035630.1.mrna1;Target=FBgn0035630.1 739 831 +
Chr1	stalkie_big_nohaplotig	CDS	1517056	1517277	.	-	0	Parent=FBgn0035630.1.mrna1;Target=FBgn0035630.1 517 738 +
Chr1	stalkie_big_nohaplotig	CDS	1518402	1518564	.	-	1	Parent=FBgn0035630.1.mrna1;Target=FBgn0035630.1 354 516 +
Chr1	stalkie_big_nohaplotig	CDS	1518624	1518760	.	-	0	Parent=FBgn0035630.1.mrna1;Target=FBgn0035630.1 217 353 +
Chr1	stalkie_big_nohaplotig	CDS	1518833	1518930	.	-	2	Parent=FBgn0035630.1.mrna1;Target=FBgn0035630.1 119 216 +
Chr1	stalkie_big_nohaplotig	CDS	1519276	1519393	.	-	0	Parent=FBgn0035630.1.mrna1;Target=FBgn0035630.1 1 118 +
Chr1	gffcl	locus	1520921	1523164	.	+	.	ID=RLOC_00005130;geneIDs=FBgn0035462.1.path1;transcripts=FBgn0035462.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1520921	1523164	.	+	.	ID=FBgn0035462.1.mrna1;geneID=FBgn0035462.1.path1;Name=FBgn0035462.1;Dir=sensecoverage=100.0;identity=99.6;matches=1856;mismatches=7;indels=0;unknowns=0;locus=RLOC_00005130
Chr1	stalkie_big_nohaplotig	exon	1520921	1521070	99	+	.	Parent=FBgn0035462.1.mrna1;Target=FBgn0035462.1 1 150 +
Chr1	stalkie_big_nohaplotig	exon	1521133	1521200	100	+	.	Parent=FBgn0035462.1.mrna1;Target=FBgn0035462.1 151 218 +
Chr1	stalkie_big_nohaplotig	exon	1521257	1521509	99	+	.	Parent=FBgn0035462.1.mrna1;Target=FBgn0035462.1 219 471 +
Chr1	stalkie_big_nohaplotig	exon	1521571	1521857	99	+	.	Parent=FBgn0035462.1.mrna1;Target=FBgn0035462.1 472 758 +
Chr1	stalkie_big_nohaplotig	exon	1521922	1522432	99	+	.	Parent=FBgn0035462.1.mrna1;Target=FBgn0035462.1 759 1269 +
Chr1	stalkie_big_nohaplotig	exon	1522495	1522662	100	+	.	Parent=FBgn0035462.1.mrna1;Target=FBgn0035462.1 1270 1437 +
Chr1	stalkie_big_nohaplotig	exon	1522739	1523164	100	+	.	Parent=FBgn0035462.1.mrna1;Target=FBgn0035462.1 1438 1863 +
Chr1	stalkie_big_nohaplotig	CDS	1520921	1521070	.	+	0	Parent=FBgn0035462.1.mrna1;Target=FBgn0035462.1 1 150 +
Chr1	stalkie_big_nohaplotig	CDS	1521133	1521200	.	+	0	Parent=FBgn0035462.1.mrna1;Target=FBgn0035462.1 151 218 +
Chr1	stalkie_big_nohaplotig	CDS	1521257	1521509	.	+	1	Parent=FBgn0035462.1.mrna1;Target=FBgn0035462.1 219 471 +
Chr1	stalkie_big_nohaplotig	CDS	1521571	1521857	.	+	0	Parent=FBgn0035462.1.mrna1;Target=FBgn0035462.1 472 758 +
Chr1	stalkie_big_nohaplotig	CDS	1521922	1522432	.	+	1	Parent=FBgn0035462.1.mrna1;Target=FBgn0035462.1 759 1269 +
Chr1	stalkie_big_nohaplotig	CDS	1522495	1522662	.	+	0	Parent=FBgn0035462.1.mrna1;Target=FBgn0035462.1 1270 1437 +
Chr1	stalkie_big_nohaplotig	CDS	1522739	1523164	.	+	0	Parent=FBgn0035462.1.mrna1;Target=FBgn0035462.1 1438 1863 +
Chr1	gffcl	locus	1523482	1523842	.	-	.	ID=RLOC_00005131;geneIDs=comp149631_c0_seq1.path1;transcripts=comp149631_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1523482	1523842	.	-	.	ID=comp149631_c0_seq1.mrna1;geneID=comp149631_c0_seq1.path1;Name=comp149631_c0_seq1;Dir=indeterminatecoverage=96.3;identity=96.7;matches=349;mismatches=12;indels=0;unknowns=0;Target=comp149631_c0_seq1 361 1 .;CDS_Target=comp149631_c0_seq1 278 3 .;locus=RLOC_00005131
Chr1	stalkie_big_nohaplotig	exon	1523482	1523842	96	-	.	Parent=comp149631_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	1523565	1523840	.	-	0	Parent=comp149631_c0_seq1.mrna1
Chr1	gffcl	locus	1524814	1525618	.	-	.	ID=RLOC_00005132;geneIDs=FBgn0052262.1.path1;transcripts=FBgn0052262.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1524814	1525618	.	-	.	ID=FBgn0052262.1.mrna1;geneID=FBgn0052262.1.path1;Name=FBgn0052262.1;Dir=sensecoverage=100.0;identity=99.6;matches=744;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005132
Chr1	stalkie_big_nohaplotig	exon	1524814	1525442	99	-	.	Parent=FBgn0052262.1.mrna1;Target=FBgn0052262.1 119 747 +
Chr1	stalkie_big_nohaplotig	exon	1525501	1525618	99	-	.	Parent=FBgn0052262.1.mrna1;Target=FBgn0052262.1 1 118 +
Chr1	stalkie_big_nohaplotig	CDS	1524814	1525442	.	-	2	Parent=FBgn0052262.1.mrna1;Target=FBgn0052262.1 119 747 +
Chr1	stalkie_big_nohaplotig	CDS	1525501	1525618	.	-	0	Parent=FBgn0052262.1.mrna1;Target=FBgn0052262.1 1 118 +
Chr1	gffcl	locus	1528307	1531567	.	+	.	ID=RLOC_00005133;geneIDs=FBgn0035464.1.path1;transcripts=FBgn0035464.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1528307	1531567	.	+	.	ID=FBgn0035464.1.mrna1;geneID=FBgn0035464.1.path1;Name=FBgn0035464.1;Dir=sensecoverage=100.0;identity=99.6;matches=1730;mismatches=7;indels=0;unknowns=0;locus=RLOC_00005133
Chr1	stalkie_big_nohaplotig	exon	1528307	1528470	98	+	.	Parent=FBgn0035464.1.mrna1;Target=FBgn0035464.1 1 164 +
Chr1	stalkie_big_nohaplotig	exon	1528530	1528647	100	+	.	Parent=FBgn0035464.1.mrna1;Target=FBgn0035464.1 165 282 +
Chr1	stalkie_big_nohaplotig	exon	1528719	1529068	99	+	.	Parent=FBgn0035464.1.mrna1;Target=FBgn0035464.1 283 632 +
Chr1	stalkie_big_nohaplotig	exon	1530282	1530410	100	+	.	Parent=FBgn0035464.1.mrna1;Target=FBgn0035464.1 633 761 +
Chr1	stalkie_big_nohaplotig	exon	1530466	1530720	99	+	.	Parent=FBgn0035464.1.mrna1;Target=FBgn0035464.1 762 1016 +
Chr1	stalkie_big_nohaplotig	exon	1530775	1530972	100	+	.	Parent=FBgn0035464.1.mrna1;Target=FBgn0035464.1 1017 1214 +
Chr1	stalkie_big_nohaplotig	exon	1531045	1531567	100	+	.	Parent=FBgn0035464.1.mrna1;Target=FBgn0035464.1 1215 1737 +
Chr1	stalkie_big_nohaplotig	CDS	1528307	1528470	.	+	0	Parent=FBgn0035464.1.mrna1;Target=FBgn0035464.1 1 164 +
Chr1	stalkie_big_nohaplotig	CDS	1528530	1528647	.	+	1	Parent=FBgn0035464.1.mrna1;Target=FBgn0035464.1 165 282 +
Chr1	stalkie_big_nohaplotig	CDS	1528719	1529068	.	+	0	Parent=FBgn0035464.1.mrna1;Target=FBgn0035464.1 283 632 +
Chr1	stalkie_big_nohaplotig	CDS	1530282	1530410	.	+	1	Parent=FBgn0035464.1.mrna1;Target=FBgn0035464.1 633 761 +
Chr1	stalkie_big_nohaplotig	CDS	1530466	1530720	.	+	1	Parent=FBgn0035464.1.mrna1;Target=FBgn0035464.1 762 1016 +
Chr1	stalkie_big_nohaplotig	CDS	1530775	1530972	.	+	1	Parent=FBgn0035464.1.mrna1;Target=FBgn0035464.1 1017 1214 +
Chr1	stalkie_big_nohaplotig	CDS	1531045	1531567	.	+	1	Parent=FBgn0035464.1.mrna1;Target=FBgn0035464.1 1215 1737 +
Chr1	gffcl	locus	1538909	1542677	.	+	.	ID=RLOC_00005134;geneIDs=FBgn0004888.2.path1;transcripts=FBgn0004888.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1538909	1542677	.	+	.	ID=FBgn0004888.2.mrna1;geneID=FBgn0004888.2.path1;Name=FBgn0004888.2;Dir=sensecoverage=100.0;identity=99.8;matches=997;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005134
Chr1	stalkie_big_nohaplotig	exon	1538909	1538960	100	+	.	Parent=FBgn0004888.2.mrna1;Target=FBgn0004888.2 1 52 +
Chr1	stalkie_big_nohaplotig	exon	1539415	1539632	100	+	.	Parent=FBgn0004888.2.mrna1;Target=FBgn0004888.2 53 270 +
Chr1	stalkie_big_nohaplotig	exon	1539713	1539943	100	+	.	Parent=FBgn0004888.2.mrna1;Target=FBgn0004888.2 271 501 +
Chr1	stalkie_big_nohaplotig	exon	1542115	1542399	99	+	.	Parent=FBgn0004888.2.mrna1;Target=FBgn0004888.2 502 786 +
Chr1	stalkie_big_nohaplotig	exon	1542465	1542677	99	+	.	Parent=FBgn0004888.2.mrna1;Target=FBgn0004888.2 787 999 +
Chr1	stalkie_big_nohaplotig	CDS	1538909	1538960	.	+	0	Parent=FBgn0004888.2.mrna1;Target=FBgn0004888.2 1 52 +
Chr1	stalkie_big_nohaplotig	CDS	1539415	1539632	.	+	2	Parent=FBgn0004888.2.mrna1;Target=FBgn0004888.2 53 270 +
Chr1	stalkie_big_nohaplotig	CDS	1539713	1539943	.	+	0	Parent=FBgn0004888.2.mrna1;Target=FBgn0004888.2 271 501 +
Chr1	stalkie_big_nohaplotig	CDS	1542115	1542399	.	+	0	Parent=FBgn0004888.2.mrna1;Target=FBgn0004888.2 502 786 +
Chr1	stalkie_big_nohaplotig	CDS	1542465	1542677	.	+	0	Parent=FBgn0004888.2.mrna1;Target=FBgn0004888.2 787 999 +
Chr1	gffcl	locus	1553986	1554595	.	+	.	ID=RLOC_00005135;geneIDs=FBgn0035103.path1;transcripts=FBgn0035103.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1553986	1554595	.	+	.	ID=FBgn0035103.mrna1;geneID=FBgn0035103.path1;Name=FBgn0035103;Dir=sensecoverage=100.0;identity=99.8;matches=554;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005135
Chr1	stalkie_big_nohaplotig	exon	1553986	1554159	99	+	.	Parent=FBgn0035103.mrna1;Target=FBgn0035103 1 174 +
Chr1	stalkie_big_nohaplotig	exon	1554215	1554595	100	+	.	Parent=FBgn0035103.mrna1;Target=FBgn0035103 175 555 +
Chr1	stalkie_big_nohaplotig	CDS	1553986	1554159	.	+	0	Parent=FBgn0035103.mrna1;Target=FBgn0035103 1 174 +
Chr1	stalkie_big_nohaplotig	CDS	1554215	1554595	.	+	0	Parent=FBgn0035103.mrna1;Target=FBgn0035103 175 555 +
Chr1	gffcl	locus	1555999	1556567	.	-	.	ID=RLOC_00005136;geneIDs=FBgn0038540.1.path1;transcripts=FBgn0038540.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1555999	1556567	.	-	.	ID=FBgn0038540.1.mrna1;geneID=FBgn0038540.1.path1;Name=FBgn0038540.1;Dir=sensecoverage=100.0;identity=100.0;matches=426;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005136
Chr1	stalkie_big_nohaplotig	exon	1555999	1556079	100	-	.	Parent=FBgn0038540.1.mrna1;Target=FBgn0038540.1 346 426 +
Chr1	stalkie_big_nohaplotig	exon	1556146	1556283	100	-	.	Parent=FBgn0038540.1.mrna1;Target=FBgn0038540.1 208 345 +
Chr1	stalkie_big_nohaplotig	exon	1556361	1556567	100	-	.	Parent=FBgn0038540.1.mrna1;Target=FBgn0038540.1 1 207 +
Chr1	stalkie_big_nohaplotig	CDS	1555999	1556079	.	-	0	Parent=FBgn0038540.1.mrna1;Target=FBgn0038540.1 346 426 +
Chr1	stalkie_big_nohaplotig	CDS	1556146	1556283	.	-	0	Parent=FBgn0038540.1.mrna1;Target=FBgn0038540.1 208 345 +
Chr1	stalkie_big_nohaplotig	CDS	1556361	1556567	.	-	0	Parent=FBgn0038540.1.mrna1;Target=FBgn0038540.1 1 207 +
Chr1	gffcl	locus	1556817	1557946	.	-	.	ID=RLOC_00005137;geneIDs=FBgn0054015.1.path1;transcripts=FBgn0054015.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1556817	1557946	.	-	.	ID=FBgn0054015.1.mrna1;geneID=FBgn0054015.1.path1;Name=FBgn0054015.1;Dir=sensecoverage=100.0;identity=99.4;matches=528;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005137
Chr1	stalkie_big_nohaplotig	exon	1556817	1556852	100	-	.	Parent=FBgn0054015.1.mrna1;Target=FBgn0054015.1 496 531 +
Chr1	stalkie_big_nohaplotig	exon	1557385	1557578	100	-	.	Parent=FBgn0054015.1.mrna1;Target=FBgn0054015.1 302 495 +
Chr1	stalkie_big_nohaplotig	exon	1557646	1557946	99	-	.	Parent=FBgn0054015.1.mrna1;Target=FBgn0054015.1 1 301 +
Chr1	stalkie_big_nohaplotig	CDS	1556817	1556852	.	-	0	Parent=FBgn0054015.1.mrna1;Target=FBgn0054015.1 496 531 +
Chr1	stalkie_big_nohaplotig	CDS	1557385	1557578	.	-	2	Parent=FBgn0054015.1.mrna1;Target=FBgn0054015.1 302 495 +
Chr1	stalkie_big_nohaplotig	CDS	1557646	1557946	.	-	0	Parent=FBgn0054015.1.mrna1;Target=FBgn0054015.1 1 301 +
Chr1	gffcl	locus	1559466	1563503	.	+	.	ID=RLOC_00005138;geneIDs=FBgn0035704.1.path1;transcripts=FBgn0035704.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1559466	1563503	.	+	.	ID=FBgn0035704.1.mrna1;geneID=FBgn0035704.1.path1;Name=FBgn0035704.1;Dir=sensecoverage=100.0;identity=99.3;matches=3755;mismatches=25;indels=0;unknowns=0;locus=RLOC_00005138
Chr1	stalkie_big_nohaplotig	exon	1559466	1559591	100	+	.	Parent=FBgn0035704.1.mrna1;Target=FBgn0035704.1 1 126 +
Chr1	stalkie_big_nohaplotig	exon	1559655	1559891	100	+	.	Parent=FBgn0035704.1.mrna1;Target=FBgn0035704.1 127 363 +
Chr1	stalkie_big_nohaplotig	exon	1559958	1561022	99	+	.	Parent=FBgn0035704.1.mrna1;Target=FBgn0035704.1 364 1428 +
Chr1	stalkie_big_nohaplotig	exon	1561083	1561934	99	+	.	Parent=FBgn0035704.1.mrna1;Target=FBgn0035704.1 1429 2280 +
Chr1	stalkie_big_nohaplotig	exon	1562004	1563503	99	+	.	Parent=FBgn0035704.1.mrna1;Target=FBgn0035704.1 2281 3780 +
Chr1	stalkie_big_nohaplotig	CDS	1559466	1559591	.	+	0	Parent=FBgn0035704.1.mrna1;Target=FBgn0035704.1 1 126 +
Chr1	stalkie_big_nohaplotig	CDS	1559655	1559891	.	+	0	Parent=FBgn0035704.1.mrna1;Target=FBgn0035704.1 127 363 +
Chr1	stalkie_big_nohaplotig	CDS	1559958	1561022	.	+	0	Parent=FBgn0035704.1.mrna1;Target=FBgn0035704.1 364 1428 +
Chr1	stalkie_big_nohaplotig	CDS	1561083	1561934	.	+	0	Parent=FBgn0035704.1.mrna1;Target=FBgn0035704.1 1429 2280 +
Chr1	stalkie_big_nohaplotig	CDS	1562004	1563503	.	+	0	Parent=FBgn0035704.1.mrna1;Target=FBgn0035704.1 2281 3780 +
Chr1	gffcl	locus	1564295	1567756	.	-	.	ID=RLOC_00005139;geneIDs=FBgn0035703.1.path1;transcripts=FBgn0035703.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1564295	1567756	.	-	.	ID=FBgn0035703.1.mrna1;geneID=FBgn0035703.1.path1;Name=FBgn0035703.1;Dir=sensecoverage=100.0;identity=99.2;matches=1953;mismatches=15;indels=0;unknowns=0;locus=RLOC_00005139
Chr1	stalkie_big_nohaplotig	exon	1564295	1564368	100	-	.	Parent=FBgn0035703.1.mrna1;Target=FBgn0035703.1 1895 1968 +
Chr1	stalkie_big_nohaplotig	exon	1564433	1564637	99	-	.	Parent=FBgn0035703.1.mrna1;Target=FBgn0035703.1 1690 1894 +
Chr1	stalkie_big_nohaplotig	exon	1564703	1565102	99	-	.	Parent=FBgn0035703.1.mrna1;Target=FBgn0035703.1 1290 1689 +
Chr1	stalkie_big_nohaplotig	exon	1565173	1565431	99	-	.	Parent=FBgn0035703.1.mrna1;Target=FBgn0035703.1 1031 1289 +
Chr1	stalkie_big_nohaplotig	exon	1566502	1566891	98	-	.	Parent=FBgn0035703.1.mrna1;Target=FBgn0035703.1 641 1030 +
Chr1	stalkie_big_nohaplotig	exon	1566947	1567421	99	-	.	Parent=FBgn0035703.1.mrna1;Target=FBgn0035703.1 166 640 +
Chr1	stalkie_big_nohaplotig	exon	1567592	1567756	100	-	.	Parent=FBgn0035703.1.mrna1;Target=FBgn0035703.1 1 165 +
Chr1	stalkie_big_nohaplotig	CDS	1564295	1564368	.	-	2	Parent=FBgn0035703.1.mrna1;Target=FBgn0035703.1 1895 1968 +
Chr1	stalkie_big_nohaplotig	CDS	1564433	1564637	.	-	0	Parent=FBgn0035703.1.mrna1;Target=FBgn0035703.1 1690 1894 +
Chr1	stalkie_big_nohaplotig	CDS	1564703	1565102	.	-	1	Parent=FBgn0035703.1.mrna1;Target=FBgn0035703.1 1290 1689 +
Chr1	stalkie_big_nohaplotig	CDS	1565173	1565431	.	-	2	Parent=FBgn0035703.1.mrna1;Target=FBgn0035703.1 1031 1289 +
Chr1	stalkie_big_nohaplotig	CDS	1566502	1566891	.	-	2	Parent=FBgn0035703.1.mrna1;Target=FBgn0035703.1 641 1030 +
Chr1	stalkie_big_nohaplotig	CDS	1566947	1567421	.	-	0	Parent=FBgn0035703.1.mrna1;Target=FBgn0035703.1 166 640 +
Chr1	stalkie_big_nohaplotig	CDS	1567592	1567756	.	-	0	Parent=FBgn0035703.1.mrna1;Target=FBgn0035703.1 1 165 +
Chr1	gffcl	locus	1569135	1570883	.	+	.	ID=RLOC_00005140;geneIDs=FBgn0035702.1.path1;transcripts=FBgn0035702.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1569135	1570883	.	+	.	ID=FBgn0035702.1.mrna1;geneID=FBgn0035702.1.path1;Name=FBgn0035702.1;Dir=sensecoverage=100.0;identity=99.2;matches=1679;mismatches=13;indels=0;unknowns=0;locus=RLOC_00005140
Chr1	stalkie_big_nohaplotig	exon	1569135	1569770	98	+	.	Parent=FBgn0035702.1.mrna1;Target=FBgn0035702.1 1 636 +
Chr1	stalkie_big_nohaplotig	exon	1569828	1570883	99	+	.	Parent=FBgn0035702.1.mrna1;Target=FBgn0035702.1 637 1692 +
Chr1	stalkie_big_nohaplotig	CDS	1569135	1569770	.	+	0	Parent=FBgn0035702.1.mrna1;Target=FBgn0035702.1 1 636 +
Chr1	stalkie_big_nohaplotig	CDS	1569828	1570883	.	+	0	Parent=FBgn0035702.1.mrna1;Target=FBgn0035702.1 637 1692 +
Chr1	stalkie_big_nohaplotig	mRNA	3532899	3534424	.	+	.	ID=comp163206_c0_seq1.mrna1;geneID=comp163206_c0_seq1.path1;Name=comp163206_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1526;mismatches=0;indels=0;unknowns=0;Target=comp163206_c0_seq1 1526 1 .;CDS_Target=comp163206_c0_seq1 685 596 .;locus=RLOC_00005141
Chr1	stalkie_big_nohaplotig	exon	3532899	3534424	100	+	.	Parent=comp163206_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	3533494	3533583	.	+	0	Parent=comp163206_c0_seq1.mrna1
Chr1	gffcl	locus	1589881	1591054	.	-	.	ID=RLOC_00005142;geneIDs=FBgn0262534.2.path1;transcripts=FBgn0262534.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1589881	1591054	.	-	.	ID=FBgn0262534.2.mrna1;geneID=FBgn0262534.2.path1;Name=FBgn0262534.2;Dir=sensecoverage=100.0;identity=99.4;matches=1056;mismatches=6;indels=0;unknowns=0;locus=RLOC_00005142
Chr1	stalkie_big_nohaplotig	exon	1589881	1590381	99	-	.	Parent=FBgn0262534.2.mrna1;Target=FBgn0262534.2 562 1062 +
Chr1	stalkie_big_nohaplotig	exon	1590440	1590866	99	-	.	Parent=FBgn0262534.2.mrna1;Target=FBgn0262534.2 135 561 +
Chr1	stalkie_big_nohaplotig	exon	1590921	1591054	99	-	.	Parent=FBgn0262534.2.mrna1;Target=FBgn0262534.2 1 134 +
Chr1	stalkie_big_nohaplotig	CDS	1589881	1590381	.	-	0	Parent=FBgn0262534.2.mrna1;Target=FBgn0262534.2 562 1062 +
Chr1	stalkie_big_nohaplotig	CDS	1590440	1590866	.	-	1	Parent=FBgn0262534.2.mrna1;Target=FBgn0262534.2 135 561 +
Chr1	stalkie_big_nohaplotig	CDS	1590921	1591054	.	-	0	Parent=FBgn0262534.2.mrna1;Target=FBgn0262534.2 1 134 +
Chr1	gffcl	locus	1629135	1630901	.	+	.	ID=RLOC_00005143;geneIDs=comp153706_c0_seq1.path1;transcripts=comp153706_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1629135	1630901	.	+	.	ID=comp153706_c0_seq1.mrna1;geneID=comp153706_c0_seq1.path1;Name=comp153706_c0_seq1;Dir=sensecoverage=99.1;identity=98.6;matches=1022;mismatches=12;indels=2;unknowns=0;Target=comp153706_c0_seq1 572 715 +;locus=RLOC_00005143
Chr1	stalkie_big_nohaplotig	exon	1629135	1629365	97	+	.	Parent=comp153706_c0_seq1.mrna1;Target=comp153706_c0_seq1 10 242 +
Chr1	stalkie_big_nohaplotig	exon	1629436	1629470	100	+	.	Parent=comp153706_c0_seq1.mrna1;Target=comp153706_c0_seq1 243 277 +
Chr1	stalkie_big_nohaplotig	exon	1629546	1629777	98	+	.	Parent=comp153706_c0_seq1.mrna1;Target=comp153706_c0_seq1 278 509 +
Chr1	stalkie_big_nohaplotig	exon	1629834	1630114	97	+	.	Parent=comp153706_c0_seq1.mrna1;Target=comp153706_c0_seq1 510 790 +
Chr1	stalkie_big_nohaplotig	exon	1630647	1630901	100	+	.	Parent=comp153706_c0_seq1.mrna1;Target=comp153706_c0_seq1 791 1045 +
Chr1	stalkie_big_nohaplotig	CDS	1629896	1630039	.	+	0	Parent=comp153706_c0_seq1.mrna1
Chr1	gffcl	locus	1632695	1633481	.	-	.	ID=RLOC_00005144;geneIDs=comp145525_c0_seq1.path1;transcripts=comp145525_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1632695	1633481	.	-	.	ID=comp145525_c0_seq1.mrna1;geneID=comp145525_c0_seq1.path1;Name=comp145525_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=728;mismatches=4;indels=0;unknowns=0;Target=comp145525_c0_seq1 1 18 +;locus=RLOC_00005144
Chr1	stalkie_big_nohaplotig	exon	1632695	1633320	99	-	.	Parent=comp145525_c0_seq1.mrna1;Target=comp145525_c0_seq1 107 732 +
Chr1	stalkie_big_nohaplotig	exon	1633376	1633481	98	-	.	Parent=comp145525_c0_seq1.mrna1;Target=comp145525_c0_seq1 1 106 +
Chr1	stalkie_big_nohaplotig	CDS	1633464	1633481	.	-	0	Parent=comp145525_c0_seq1.mrna1
Chr1	gffcl	locus	1706909	1710492	.	-	.	ID=RLOC_00005145;geneIDs=FBgn0035420.1.path1;transcripts=FBgn0035420.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1706909	1710492	.	-	.	ID=FBgn0035420.1.mrna1;geneID=FBgn0035420.1.path1;Name=FBgn0035420.1;Dir=sensecoverage=31.3;identity=99.3;matches=2130;mismatches=16;indels=0;unknowns=0;locus=RLOC_00005145
Chr1	stalkie_big_nohaplotig	exon	1706909	1707628	98	-	.	Parent=FBgn0035420.1.mrna1;Target=FBgn0035420.1 1427 2146 +
Chr1	stalkie_big_nohaplotig	exon	1707699	1707981	98	-	.	Parent=FBgn0035420.1.mrna1;Target=FBgn0035420.1 1144 1426 +
Chr1	stalkie_big_nohaplotig	exon	1708880	1709023	99	-	.	Parent=FBgn0035420.1.mrna1;Target=FBgn0035420.1 1000 1143 +
Chr1	stalkie_big_nohaplotig	exon	1709089	1709373	99	-	.	Parent=FBgn0035420.1.mrna1;Target=FBgn0035420.1 715 999 +
Chr1	stalkie_big_nohaplotig	exon	1709454	1709591	99	-	.	Parent=FBgn0035420.1.mrna1;Target=FBgn0035420.1 577 714 +
Chr1	stalkie_big_nohaplotig	exon	1709651	1709812	100	-	.	Parent=FBgn0035420.1.mrna1;Target=FBgn0035420.1 415 576 +
Chr1	stalkie_big_nohaplotig	exon	1709891	1710121	100	-	.	Parent=FBgn0035420.1.mrna1;Target=FBgn0035420.1 184 414 +
Chr1	stalkie_big_nohaplotig	exon	1710207	1710333	100	-	.	Parent=FBgn0035420.1.mrna1;Target=FBgn0035420.1 57 183 +
Chr1	stalkie_big_nohaplotig	exon	1710437	1710492	100	-	.	Parent=FBgn0035420.1.mrna1;Target=FBgn0035420.1 1 56 +
Chr1	stalkie_big_nohaplotig	CDS	1706909	1707628	.	-	2	Parent=FBgn0035420.1.mrna1;Target=FBgn0035420.1 1427 2146 +
Chr1	stalkie_big_nohaplotig	CDS	1707699	1707981	.	-	0	Parent=FBgn0035420.1.mrna1;Target=FBgn0035420.1 1144 1426 +
Chr1	stalkie_big_nohaplotig	CDS	1708880	1709023	.	-	0	Parent=FBgn0035420.1.mrna1;Target=FBgn0035420.1 1000 1143 +
Chr1	stalkie_big_nohaplotig	CDS	1709089	1709373	.	-	0	Parent=FBgn0035420.1.mrna1;Target=FBgn0035420.1 715 999 +
Chr1	stalkie_big_nohaplotig	CDS	1709454	1709591	.	-	0	Parent=FBgn0035420.1.mrna1;Target=FBgn0035420.1 577 714 +
Chr1	stalkie_big_nohaplotig	CDS	1709651	1709812	.	-	0	Parent=FBgn0035420.1.mrna1;Target=FBgn0035420.1 415 576 +
Chr1	stalkie_big_nohaplotig	CDS	1709891	1710121	.	-	0	Parent=FBgn0035420.1.mrna1;Target=FBgn0035420.1 184 414 +
Chr1	stalkie_big_nohaplotig	CDS	1710207	1710333	.	-	1	Parent=FBgn0035420.1.mrna1;Target=FBgn0035420.1 57 183 +
Chr1	stalkie_big_nohaplotig	CDS	1710437	1710492	.	-	0	Parent=FBgn0035420.1.mrna1;Target=FBgn0035420.1 1 56 +
Chr1	gffcl	locus	1713811	1716852	.	+	.	ID=RLOC_00005146;geneIDs=FBgn0012058.1.path1;transcripts=FBgn0012058.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1713811	1716852	.	+	.	ID=FBgn0012058.1.mrna1;geneID=FBgn0012058.1.path1;Name=FBgn0012058.1;Dir=sensecoverage=100.0;identity=99.5;matches=2851;mismatches=8;indels=6;unknowns=0;locus=RLOC_00005146
Chr1	stalkie_big_nohaplotig	exon	1713811	1713915	100	+	.	Parent=FBgn0012058.1.mrna1;Target=FBgn0012058.1 1 105 +
Chr1	stalkie_big_nohaplotig	exon	1713985	1714060	100	+	.	Parent=FBgn0012058.1.mrna1;Target=FBgn0012058.1 106 181 +
Chr1	stalkie_big_nohaplotig	exon	1714116	1715318	99	+	.	Parent=FBgn0012058.1.mrna1;Target=FBgn0012058.1 182 1390 +
Chr1	stalkie_big_nohaplotig	exon	1715378	1716852	99	+	.	Parent=FBgn0012058.1.mrna1;Target=FBgn0012058.1 1391 2865 +
Chr1	stalkie_big_nohaplotig	CDS	1713811	1713915	.	+	0	Parent=FBgn0012058.1.mrna1;Target=FBgn0012058.1 1 105 +
Chr1	stalkie_big_nohaplotig	CDS	1713985	1714060	.	+	0	Parent=FBgn0012058.1.mrna1;Target=FBgn0012058.1 106 181 +
Chr1	stalkie_big_nohaplotig	CDS	1714116	1715318	.	+	2	Parent=FBgn0012058.1.mrna1;Target=FBgn0012058.1 182 1390 +
Chr1	stalkie_big_nohaplotig	CDS	1715378	1716852	.	+	2	Parent=FBgn0012058.1.mrna1;Target=FBgn0012058.1 1391 2865 +
Chr1	gffcl	locus	1718114	1719762	.	-	.	ID=RLOC_00005147;geneIDs=ORF808.path1;transcripts=ORF808.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1718114	1719762	.	-	.	ID=ORF808.mrna1;geneID=ORF808.path1;Name=ORF808;Dir=sensecoverage=100.0;identity=98.6;matches=1396;mismatches=20;indels=0;unknowns=0;locus=RLOC_00005147
Chr1	stalkie_big_nohaplotig	exon	1718114	1718981	98	-	.	Parent=ORF808.mrna1;Target=ORF808 549 1416 +
Chr1	stalkie_big_nohaplotig	exon	1719040	1719499	97	-	.	Parent=ORF808.mrna1;Target=ORF808 89 548 +
Chr1	stalkie_big_nohaplotig	exon	1719675	1719762	100	-	.	Parent=ORF808.mrna1;Target=ORF808 1 88 +
Chr1	stalkie_big_nohaplotig	CDS	1718114	1718981	.	-	1	Parent=ORF808.mrna1;Target=ORF808 549 1416 +
Chr1	stalkie_big_nohaplotig	CDS	1719040	1719499	.	-	2	Parent=ORF808.mrna1;Target=ORF808 89 548 +
Chr1	stalkie_big_nohaplotig	CDS	1719675	1719762	.	-	0	Parent=ORF808.mrna1;Target=ORF808 1 88 +
Chr1	gffcl	locus	1726728	1727989	.	+	.	ID=RLOC_00005148;geneIDs=FBgn0024542.1.path1;transcripts=FBgn0024542.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1726728	1727989	.	+	.	ID=FBgn0024542.1.mrna1;geneID=FBgn0024542.1.path1;Name=FBgn0024542.1;Dir=sensecoverage=100.0;identity=99.4;matches=1184;mismatches=6;indels=1;unknowns=0;locus=RLOC_00005148
Chr1	stalkie_big_nohaplotig	exon	1726728	1727190	98	+	.	Parent=FBgn0024542.1.mrna1;Target=FBgn0024542.1 1 464 +
Chr1	stalkie_big_nohaplotig	exon	1727263	1727989	99	+	.	Parent=FBgn0024542.1.mrna1;Target=FBgn0024542.1 465 1191 +
Chr1	stalkie_big_nohaplotig	CDS	1726805	1727190	.	+	0	Parent=FBgn0024542.1.mrna1;Target=FBgn0024542.1 79 464 +
Chr1	stalkie_big_nohaplotig	CDS	1727263	1727989	.	+	1	Parent=FBgn0024542.1.mrna1;Target=FBgn0024542.1 465 1191 +
Chr1	gffcl	locus	1728112	1728940	.	-	.	ID=RLOC_00005149;geneIDs=FBgn0028648.1.path1;transcripts=FBgn0028648.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1728112	1728940	.	-	.	ID=FBgn0028648.1.mrna1;geneID=FBgn0028648.1.path1;Name=FBgn0028648.1;Dir=sensecoverage=100.0;identity=98.3;matches=640;mismatches=11;indels=0;unknowns=0;locus=RLOC_00005149
Chr1	stalkie_big_nohaplotig	exon	1728112	1728344	96	-	.	Parent=FBgn0028648.1.mrna1;Target=FBgn0028648.1 419 651 +
Chr1	stalkie_big_nohaplotig	exon	1728407	1728609	100	-	.	Parent=FBgn0028648.1.mrna1;Target=FBgn0028648.1 216 418 +
Chr1	stalkie_big_nohaplotig	exon	1728672	1728775	99	-	.	Parent=FBgn0028648.1.mrna1;Target=FBgn0028648.1 112 215 +
Chr1	stalkie_big_nohaplotig	exon	1728830	1728940	98	-	.	Parent=FBgn0028648.1.mrna1;Target=FBgn0028648.1 1 111 +
Chr1	stalkie_big_nohaplotig	CDS	1728112	1728344	.	-	2	Parent=FBgn0028648.1.mrna1;Target=FBgn0028648.1 419 651 +
Chr1	stalkie_big_nohaplotig	CDS	1728407	1728609	.	-	1	Parent=FBgn0028648.1.mrna1;Target=FBgn0028648.1 216 418 +
Chr1	stalkie_big_nohaplotig	CDS	1728672	1728775	.	-	0	Parent=FBgn0028648.1.mrna1;Target=FBgn0028648.1 112 215 +
Chr1	stalkie_big_nohaplotig	CDS	1728830	1728940	.	-	0	Parent=FBgn0028648.1.mrna1;Target=FBgn0028648.1 1 111 +
Chr1	gffcl	locus	1794434	1794527	.	-	.	ID=RLOC_00005150;geneIDs=comp158898_c2_seq1.path2;transcripts=comp158898_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	1794434	1794527	.	-	.	ID=comp158898_c2_seq1.mrna2;geneID=comp158898_c2_seq1.path2;Name=comp158898_c2_seq1;Dir=indeterminatecoverage=5.2;identity=100.0;matches=94;mismatches=0;indels=0;unknowns=0;Target=comp158898_c2_seq1 1796 1703 .;locus=RLOC_00005150
Chr1	stalkie_big_nohaplotig	exon	1794434	1794527	100	-	.	Parent=comp158898_c2_seq1.mrna2
Chr1	gffcl	locus	1811099	1812685	.	-	.	ID=RLOC_00005151;geneIDs=comp153120_c0_seq1.path1;transcripts=comp153120_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1811099	1812685	.	-	.	ID=comp153120_c0_seq1.mrna1;geneID=comp153120_c0_seq1.path1;Name=comp153120_c0_seq1;Dir=antisensecoverage=97.3;identity=92.6;matches=685;mismatches=13;indels=42;unknowns=0;Target=comp153120_c0_seq1 55 189 .;locus=RLOC_00005151
Chr1	stalkie_big_nohaplotig	exon	1811099	1811450	87	-	.	Parent=comp153120_c0_seq1.mrna1;Target=comp153120_c0_seq1 21 341 -
Chr1	stalkie_big_nohaplotig	exon	1812309	1812685	96	-	.	Parent=comp153120_c0_seq1.mrna1;Target=comp153120_c0_seq1 342 729 -
Chr1	stalkie_big_nohaplotig	CDS	1811133	1811298	.	-	0	Parent=comp153120_c0_seq1.mrna1
Chr1	gffcl	locus	1874301	1874467	.	+	.	ID=RLOC_00005152;geneIDs=comp161641_c3_seq1.path2;transcripts=comp161641_c3_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	1874301	1874467	.	+	.	ID=comp161641_c3_seq1.mrna2;geneID=comp161641_c3_seq1.path2;Name=comp161641_c3_seq1;Dir=indeterminatecoverage=10.3;identity=93.4;matches=156;mismatches=11;indels=0;unknowns=0;Target=comp161641_c3_seq1 1627 1461 .;locus=RLOC_00005152
Chr1	stalkie_big_nohaplotig	exon	1874301	1874467	93	+	.	Parent=comp161641_c3_seq1.mrna2
Chr1	gffcl	locus	1951476	1952406	.	+	.	ID=RLOC_00005153;geneIDs=comp153381_c0_seq1.path1;transcripts=comp153381_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1951476	1952406	.	+	.	ID=comp153381_c0_seq1.mrna1;geneID=comp153381_c0_seq1.path1;Name=comp153381_c0_seq1;Dir=sensecoverage=97.8;identity=99.5;matches=860;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005153
Chr1	stalkie_big_nohaplotig	exon	1951476	1951652	100	+	.	Parent=comp153381_c0_seq1.mrna1;Target=comp153381_c0_seq1 20 196 +
Chr1	stalkie_big_nohaplotig	exon	1951720	1952406	99	+	.	Parent=comp153381_c0_seq1.mrna1;Target=comp153381_c0_seq1 197 883 +
Chr1	stalkie_big_nohaplotig	CDS	1951478	1951652	.	+	0	Parent=comp153381_c0_seq1.mrna1;Target=comp153381_c0_seq1 22 196 +
Chr1	stalkie_big_nohaplotig	CDS	1951720	1952159	.	+	2	Parent=comp153381_c0_seq1.mrna1;Target=comp153381_c0_seq1 197 636 +
Chr1	gffcl	locus	1959677	1982401	.	-	.	ID=RLOC_00005154;geneIDs=comp146533_c0_seq1.path1;transcripts=comp146533_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	1959677	1982401	.	-	.	ID=comp146533_c0_seq1.mrna1;geneID=comp146533_c0_seq1.path1;Name=comp146533_c0_seq1;Dir=antisensecoverage=84.5;identity=93.3;matches=278;mismatches=13;indels=7;unknowns=0;Target=comp146533_c0_seq1 148 249 .;locus=RLOC_00005154
Chr1	stalkie_big_nohaplotig	exon	1959677	1959925	95	-	.	Parent=comp146533_c0_seq1.mrna1;Target=comp146533_c0_seq1 1 249 -
Chr1	stalkie_big_nohaplotig	exon	1966921	1966922	100	-	.	Parent=comp146533_c0_seq1.mrna1;Target=comp146533_c0_seq1 250 251 -
Chr1	stalkie_big_nohaplotig	exon	1972761	1972769	100	-	.	Parent=comp146533_c0_seq1.mrna1;Target=comp146533_c0_seq1 376 384 -
Chr1	stalkie_big_nohaplotig	exon	1979520	1979525	38	-	.	Parent=comp146533_c0_seq1.mrna1;Target=comp146533_c0_seq1 414 426 -
Chr1	stalkie_big_nohaplotig	exon	1980275	1980285	100	-	.	Parent=comp146533_c0_seq1.mrna1;Target=comp146533_c0_seq1 427 437 -
Chr1	stalkie_big_nohaplotig	exon	1982390	1982401	100	-	.	Parent=comp146533_c0_seq1.mrna1;Target=comp146533_c0_seq1 438 449 -
Chr1	stalkie_big_nohaplotig	CDS	1959824	1959925	.	-	0	Parent=comp146533_c0_seq1.mrna1
Chr1	gffcl	locus	2028733	2032448	.	+	.	ID=RLOC_00005155;geneIDs=FBgn0032648.1.path1;transcripts=FBgn0032648.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2028733	2032448	.	+	.	ID=FBgn0032648.1.mrna1;geneID=FBgn0032648.1.path1;Name=FBgn0032648.1;Dir=sensecoverage=100.0;identity=99.1;matches=3296;mismatches=16;indels=15;unknowns=0;locus=RLOC_00005155
Chr1	stalkie_big_nohaplotig	exon	2028733	2029189	96	+	.	Parent=FBgn0032648.1.mrna1;Target=FBgn0032648.1 1 451 +
Chr1	stalkie_big_nohaplotig	exon	2029246	2029447	100	+	.	Parent=FBgn0032648.1.mrna1;Target=FBgn0032648.1 452 653 +
Chr1	stalkie_big_nohaplotig	exon	2029729	2030515	99	+	.	Parent=FBgn0032648.1.mrna1;Target=FBgn0032648.1 654 1440 +
Chr1	stalkie_big_nohaplotig	exon	2030577	2032448	99	+	.	Parent=FBgn0032648.1.mrna1;Target=FBgn0032648.1 1441 3321 +
Chr1	stalkie_big_nohaplotig	CDS	2028733	2029189	.	+	0	Parent=FBgn0032648.1.mrna1;Target=FBgn0032648.1 1 451 +
Chr1	stalkie_big_nohaplotig	CDS	2029246	2029447	.	+	2	Parent=FBgn0032648.1.mrna1;Target=FBgn0032648.1 452 653 +
Chr1	stalkie_big_nohaplotig	CDS	2029729	2030515	.	+	1	Parent=FBgn0032648.1.mrna1;Target=FBgn0032648.1 654 1440 +
Chr1	stalkie_big_nohaplotig	CDS	2030577	2032448	.	+	0	Parent=FBgn0032648.1.mrna1;Target=FBgn0032648.1 1441 3321 +
Chr1	gffcl	locus	2032854	2033963	.	+	.	ID=RLOC_00005156;geneIDs=comp143401_c0_seq1.path1;transcripts=comp143401_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2032854	2033963	.	+	.	ID=comp143401_c0_seq1.mrna1;geneID=comp143401_c0_seq1.path1;Name=comp143401_c0_seq1;Dir=antisensecoverage=98.7;identity=99.4;matches=1012;mismatches=2;indels=4;unknowns=0;Target=comp143401_c0_seq1 650 799 .;locus=RLOC_00005156
Chr1	stalkie_big_nohaplotig	exon	2032854	2033476	99	+	.	Parent=comp143401_c0_seq1.mrna1;Target=comp143401_c0_seq1 397 1019 -
Chr1	stalkie_big_nohaplotig	exon	2033573	2033963	98	+	.	Parent=comp143401_c0_seq1.mrna1;Target=comp143401_c0_seq1 2 396 -
Chr1	stalkie_big_nohaplotig	CDS	2033074	2033223	.	+	0	Parent=comp143401_c0_seq1.mrna1
Chr1	gffcl	locus	2058903	2059892	.	-	.	ID=RLOC_00005157;geneIDs=ORF2078.path2;transcripts=ORF2078.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	2058903	2059892	.	-	.	ID=ORF2078.mrna2;geneID=ORF2078.path2;Name=ORF2078;Dir=indeterminatecoverage=100.0;identity=98.5;matches=910;mismatches=14;indels=0;unknowns=0;locus=RLOC_00005157
Chr1	stalkie_big_nohaplotig	exon	2058903	2058981	97	-	.	Parent=ORF2078.mrna2;Target=ORF2078 924 846 .
Chr1	stalkie_big_nohaplotig	exon	2059048	2059892	98	-	.	Parent=ORF2078.mrna2;Target=ORF2078 845 1 .
Chr1	stalkie_big_nohaplotig	CDS	2058903	2058981	.	-	1	Parent=ORF2078.mrna2;Target=ORF2078 924 846 .
Chr1	stalkie_big_nohaplotig	CDS	2059048	2059892	.	-	0	Parent=ORF2078.mrna2;Target=ORF2078 845 1 .
Chr1	gffcl	locus	2060013	2060588	.	+	.	ID=RLOC_00005158;geneIDs=comp158500_c0_seq1.path2;transcripts=comp158500_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	2060013	2060588	.	+	.	ID=comp158500_c0_seq1.mrna2;geneID=comp158500_c0_seq1.path2;Name=comp158500_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=560;mismatches=13;indels=3;unknowns=0;Target=comp158500_c0_seq1 573 1 .;CDS_Target=comp158500_c0_seq1 571 410 .;locus=RLOC_00005158
Chr1	stalkie_big_nohaplotig	exon	2060013	2060588	97	+	.	Parent=comp158500_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	2060425	2060586	.	+	0	Parent=comp158500_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	2086708	2480368	.	-	.	ID=comp159992_c1_seq1.mrna1;geneID=comp159992_c1_seq1.path1;Name=comp159992_c1_seq1;Dir=antisensecoverage=73.6;identity=98.5;matches=3817;mismatches=37;indels=21;unknowns=0;locus=RLOC_00005159
Chr1	stalkie_big_nohaplotig	exon	2086708	2086713	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1433 1438 -
Chr1	stalkie_big_nohaplotig	exon	2089458	2089462	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1439 1443 -
Chr1	stalkie_big_nohaplotig	exon	2089470	2089477	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1476 1483 -
Chr1	stalkie_big_nohaplotig	exon	2092221	2092229	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1484 1492 -
Chr1	stalkie_big_nohaplotig	exon	2098573	2098579	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1493 1499 -
Chr1	stalkie_big_nohaplotig	exon	2129440	2129442	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1500 1502 -
Chr1	stalkie_big_nohaplotig	exon	2130457	2130463	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1503 1509 -
Chr1	stalkie_big_nohaplotig	exon	2137525	2137528	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1510 1513 -
Chr1	stalkie_big_nohaplotig	exon	2142298	2142304	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1514 1520 -
Chr1	stalkie_big_nohaplotig	exon	2148511	2148513	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1521 1523 -
Chr1	stalkie_big_nohaplotig	exon	2167907	2167911	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1524 1528 -
Chr1	stalkie_big_nohaplotig	exon	2181518	2181529	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1529 1540 -
Chr1	stalkie_big_nohaplotig	exon	2186041	2186065	68	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1541 1562 -
Chr1	stalkie_big_nohaplotig	exon	2189162	2189174	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1563 1575 -
Chr1	stalkie_big_nohaplotig	exon	2190656	2190662	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1619 1625 -
Chr1	stalkie_big_nohaplotig	exon	2191350	2191357	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1626 1633 -
Chr1	stalkie_big_nohaplotig	exon	2192586	2192589	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1634 1637 -
Chr1	stalkie_big_nohaplotig	exon	2197155	2197159	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1638 1642 -
Chr1	stalkie_big_nohaplotig	exon	2209921	2209924	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1643 1646 -
Chr1	stalkie_big_nohaplotig	exon	2210072	2210074	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1647 1649 -
Chr1	stalkie_big_nohaplotig	exon	2218195	2218196	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1650 1651 -
Chr1	stalkie_big_nohaplotig	exon	2239682	2239688	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1652 1658 -
Chr1	stalkie_big_nohaplotig	exon	2246184	2246190	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1659 1665 -
Chr1	stalkie_big_nohaplotig	exon	2250663	2250665	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1666 1668 -
Chr1	stalkie_big_nohaplotig	exon	2258233	2258234	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1669 1670 -
Chr1	stalkie_big_nohaplotig	exon	2265347	2265350	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1671 1674 -
Chr1	stalkie_big_nohaplotig	exon	2267026	2267030	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1675 1679 -
Chr1	stalkie_big_nohaplotig	exon	2269321	2269328	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1680 1687 -
Chr1	stalkie_big_nohaplotig	exon	2269346	2269354	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1742 1750 -
Chr1	stalkie_big_nohaplotig	exon	2276428	2276433	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1751 1756 -
Chr1	stalkie_big_nohaplotig	exon	2276699	2276700	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1757 1758 -
Chr1	stalkie_big_nohaplotig	exon	2277054	2277073	55	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1759 1769 -
Chr1	stalkie_big_nohaplotig	exon	2284070	2284078	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1770 1778 -
Chr1	stalkie_big_nohaplotig	exon	2291520	2291524	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1779 1783 -
Chr1	stalkie_big_nohaplotig	exon	2298599	2298606	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1784 1791 -
Chr1	stalkie_big_nohaplotig	exon	2303116	2303122	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1792 1798 -
Chr1	stalkie_big_nohaplotig	exon	2305460	2305465	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1799 1804 -
Chr1	stalkie_big_nohaplotig	exon	2311491	2311492	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1805 1806 -
Chr1	stalkie_big_nohaplotig	exon	2314255	2314266	83	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1807 1817 -
Chr1	stalkie_big_nohaplotig	exon	2319061	2319064	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1818 1821 -
Chr1	stalkie_big_nohaplotig	exon	2322668	2322671	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1822 1825 -
Chr1	stalkie_big_nohaplotig	exon	2363923	2363966	46	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1826 1865 -
Chr1	stalkie_big_nohaplotig	exon	2367228	2367238	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1866 1876 -
Chr1	stalkie_big_nohaplotig	exon	2368125	2368134	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1877 1886 -
Chr1	stalkie_big_nohaplotig	exon	2379710	2379716	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1887 1893 -
Chr1	stalkie_big_nohaplotig	exon	2382199	2382202	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1894 1897 -
Chr1	stalkie_big_nohaplotig	exon	2389801	2389808	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1898 1905 -
Chr1	stalkie_big_nohaplotig	exon	2446593	2447602	99	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 1906 2913 -
Chr1	stalkie_big_nohaplotig	exon	2447660	2448058	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 2914 3312 -
Chr1	stalkie_big_nohaplotig	exon	2448126	2448435	99	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 3313 3622 -
Chr1	stalkie_big_nohaplotig	exon	2448559	2448798	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 3623 3862 -
Chr1	stalkie_big_nohaplotig	exon	2461224	2461331	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 3863 3970 -
Chr1	stalkie_big_nohaplotig	exon	2464606	2464728	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 3971 4093 -
Chr1	stalkie_big_nohaplotig	exon	2464992	2465360	98	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 4094 4462 -
Chr1	stalkie_big_nohaplotig	exon	2465447	2465633	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 4463 4649 -
Chr1	stalkie_big_nohaplotig	exon	2467377	2467487	100	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 4650 4760 -
Chr1	stalkie_big_nohaplotig	exon	2479714	2480368	99	-	.	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 4761 5415 -
Chr1	stalkie_big_nohaplotig	CDS	2446995	2447602	.	-	2	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 2306 2913 .
Chr1	stalkie_big_nohaplotig	CDS	2447660	2448058	.	-	2	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 2914 3312 .
Chr1	stalkie_big_nohaplotig	CDS	2448126	2448435	.	-	0	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 3313 3622 .
Chr1	stalkie_big_nohaplotig	CDS	2448559	2448798	.	-	0	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 3623 3862 .
Chr1	stalkie_big_nohaplotig	CDS	2461224	2461331	.	-	0	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 3863 3970 .
Chr1	stalkie_big_nohaplotig	CDS	2464606	2464728	.	-	0	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 3971 4093 .
Chr1	stalkie_big_nohaplotig	CDS	2464992	2465360	.	-	0	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 4094 4462 .
Chr1	stalkie_big_nohaplotig	CDS	2465447	2465633	.	-	1	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 4463 4649 .
Chr1	stalkie_big_nohaplotig	CDS	2467377	2467487	.	-	1	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 4650 4760 .
Chr1	stalkie_big_nohaplotig	CDS	2479714	2479784	.	-	0	Parent=comp159992_c1_seq1.mrna1;Target=comp159992_c1_seq1 4761 4831 .
Chr1	stalkie_big_nohaplotig	mRNA	2264511	2266370	.	-	.	ID=FBgn0037138.4.mrna1;geneID=FBgn0037138.4.path1;Name=FBgn0037138.4;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1848;mismatches=12;indels=0;unknowns=0;Target=FBgn0037138.4 1860 1 .;locus=RLOC_00005159
Chr1	stalkie_big_nohaplotig	exon	2264511	2266370	99	-	.	Parent=FBgn0037138.4.mrna1
Chr1	stalkie_big_nohaplotig	CDS	2264511	2266370	.	-	0	Parent=FBgn0037138.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2445398	2446612	.	-	.	ID=comp159215_c0_seq1.mrna1;geneID=comp159215_c0_seq1.path1;Name=comp159215_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=1196;mismatches=19;indels=8;unknowns=0;Target=comp159215_c0_seq1 1223 1 .;CDS_Target=comp159215_c0_seq1 852 754 .;locus=RLOC_00005159
Chr1	stalkie_big_nohaplotig	exon	2445398	2446612	97	-	.	Parent=comp159215_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	2445766	2445864	.	-	0	Parent=comp159215_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2446998	2479850	.	-	.	ID=FBgn0035696.1.mrna1;geneID=FBgn0035696.1.path1;Name=FBgn0035696.1;Dir=sensecoverage=100.0;identity=99.8;matches=2524;mismatches=5;indels=0;unknowns=0;locus=RLOC_00005159
Chr1	stalkie_big_nohaplotig	exon	2446998	2447602	100	-	.	Parent=FBgn0035696.1.mrna1;Target=FBgn0035696.1 1925 2529 +
Chr1	stalkie_big_nohaplotig	exon	2447660	2447899	100	-	.	Parent=FBgn0035696.1.mrna1;Target=FBgn0035696.1 1685 1924 +
Chr1	stalkie_big_nohaplotig	exon	2447960	2448058	100	-	.	Parent=FBgn0035696.1.mrna1;Target=FBgn0035696.1 1586 1684 +
Chr1	stalkie_big_nohaplotig	exon	2448126	2448435	99	-	.	Parent=FBgn0035696.1.mrna1;Target=FBgn0035696.1 1276 1585 +
Chr1	stalkie_big_nohaplotig	exon	2448559	2448798	100	-	.	Parent=FBgn0035696.1.mrna1;Target=FBgn0035696.1 1036 1275 +
Chr1	stalkie_big_nohaplotig	exon	2461224	2461331	100	-	.	Parent=FBgn0035696.1.mrna1;Target=FBgn0035696.1 928 1035 +
Chr1	stalkie_big_nohaplotig	exon	2464606	2464728	100	-	.	Parent=FBgn0035696.1.mrna1;Target=FBgn0035696.1 805 927 +
Chr1	stalkie_big_nohaplotig	exon	2464992	2465360	98	-	.	Parent=FBgn0035696.1.mrna1;Target=FBgn0035696.1 436 804 +
Chr1	stalkie_big_nohaplotig	exon	2465447	2465633	100	-	.	Parent=FBgn0035696.1.mrna1;Target=FBgn0035696.1 249 435 +
Chr1	stalkie_big_nohaplotig	exon	2467377	2467487	100	-	.	Parent=FBgn0035696.1.mrna1;Target=FBgn0035696.1 138 248 +
Chr1	stalkie_big_nohaplotig	exon	2479714	2479850	100	-	.	Parent=FBgn0035696.1.mrna1;Target=FBgn0035696.1 1 137 +
Chr1	stalkie_big_nohaplotig	CDS	2446998	2447602	.	-	2	Parent=FBgn0035696.1.mrna1;Target=FBgn0035696.1 1925 2529 +
Chr1	stalkie_big_nohaplotig	CDS	2447660	2447899	.	-	2	Parent=FBgn0035696.1.mrna1;Target=FBgn0035696.1 1685 1924 +
Chr1	stalkie_big_nohaplotig	CDS	2447960	2448058	.	-	2	Parent=FBgn0035696.1.mrna1;Target=FBgn0035696.1 1586 1684 +
Chr1	stalkie_big_nohaplotig	CDS	2448126	2448435	.	-	0	Parent=FBgn0035696.1.mrna1;Target=FBgn0035696.1 1276 1585 +
Chr1	stalkie_big_nohaplotig	CDS	2448559	2448798	.	-	0	Parent=FBgn0035696.1.mrna1;Target=FBgn0035696.1 1036 1275 +
Chr1	stalkie_big_nohaplotig	CDS	2461224	2461331	.	-	0	Parent=FBgn0035696.1.mrna1;Target=FBgn0035696.1 928 1035 +
Chr1	stalkie_big_nohaplotig	CDS	2464606	2464728	.	-	0	Parent=FBgn0035696.1.mrna1;Target=FBgn0035696.1 805 927 +
Chr1	stalkie_big_nohaplotig	CDS	2464992	2465360	.	-	0	Parent=FBgn0035696.1.mrna1;Target=FBgn0035696.1 436 804 +
Chr1	stalkie_big_nohaplotig	CDS	2465447	2465633	.	-	1	Parent=FBgn0035696.1.mrna1;Target=FBgn0035696.1 249 435 +
Chr1	stalkie_big_nohaplotig	CDS	2467377	2467487	.	-	1	Parent=FBgn0035696.1.mrna1;Target=FBgn0035696.1 138 248 +
Chr1	stalkie_big_nohaplotig	CDS	2479714	2479850	.	-	0	Parent=FBgn0035696.1.mrna1;Target=FBgn0035696.1 1 137 +
Chr1	gffcl	locus	2227328	2230151	.	+	.	ID=RLOC_00005160;geneIDs=comp161858_c0_seq1.path1;transcripts=comp161858_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2227328	2230151	.	+	.	ID=comp161858_c0_seq1.mrna1;geneID=comp161858_c0_seq1.path1;Name=comp161858_c0_seq1;Dir=indeterminatecoverage=97.5;identity=93.6;matches=2010;mismatches=100;indels=38;unknowns=0;locus=RLOC_00005160
Chr1	stalkie_big_nohaplotig	exon	2227328	2227754	95	+	.	Parent=comp161858_c0_seq1.mrna1;Target=comp161858_c0_seq1 428 2 .
Chr1	stalkie_big_nohaplotig	exon	2227818	2227918	100	+	.	Parent=comp161858_c0_seq1.mrna1;Target=comp161858_c0_seq1 529 429 .
Chr1	stalkie_big_nohaplotig	exon	2227974	2228307	97	+	.	Parent=comp161858_c0_seq1.mrna1;Target=comp161858_c0_seq1 869 530 .
Chr1	stalkie_big_nohaplotig	exon	2228396	2228445	100	+	.	Parent=comp161858_c0_seq1.mrna1;Target=comp161858_c0_seq1 919 870 .
Chr1	stalkie_big_nohaplotig	exon	2228512	2228851	99	+	.	Parent=comp161858_c0_seq1.mrna1;Target=comp161858_c0_seq1 1259 920 .
Chr1	stalkie_big_nohaplotig	exon	2228914	2228945	93	+	.	Parent=comp161858_c0_seq1.mrna1;Target=comp161858_c0_seq1 1291 1260 .
Chr1	stalkie_big_nohaplotig	exon	2229012	2229276	82	+	.	Parent=comp161858_c0_seq1.mrna1;Target=comp161858_c0_seq1 1559 1292 .
Chr1	stalkie_big_nohaplotig	exon	2229564	2230151	89	+	.	Parent=comp161858_c0_seq1.mrna1;Target=comp161858_c0_seq1 2122 1560 .
Chr1	stalkie_big_nohaplotig	CDS	2229269	2229276	.	+	0	Parent=comp161858_c0_seq1.mrna1;Target=comp161858_c0_seq1 1559 1552 .
Chr1	stalkie_big_nohaplotig	CDS	2229564	2229573	.	+	1	Parent=comp161858_c0_seq1.mrna1;Target=comp161858_c0_seq1 1569 1560 .
Chr1	gffcl	locus	2272444	2273603	.	+	.	ID=RLOC_00005161;geneIDs=comp154258_c2_seq1.path1;transcripts=comp154258_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2272444	2273603	.	+	.	ID=comp154258_c2_seq1.mrna1;geneID=comp154258_c2_seq1.path1;Name=comp154258_c2_seq1;Dir=indeterminatecoverage=90.0;identity=94.0;matches=1092;mismatches=34;indels=36;unknowns=0;Target=comp154258_c2_seq1 1252 125 .;CDS_Target=comp154258_c2_seq1 853 839 .;locus=RLOC_00005161
Chr1	stalkie_big_nohaplotig	exon	2272444	2273603	93	+	.	Parent=comp154258_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	2273192	2273206	.	+	0	Parent=comp154258_c2_seq1.mrna1
Chr1	gffcl	locus	2306204	2307663	.	+	.	ID=RLOC_00005162;geneIDs=comp160486_c0_seq1.path1;transcripts=comp160486_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2306204	2307663	.	+	.	ID=comp160486_c0_seq1.mrna1;geneID=comp160486_c0_seq1.path1;Name=comp160486_c0_seq1;Dir=sensecoverage=98.1;identity=97.6;matches=1173;mismatches=20;indels=9;unknowns=0;Target=comp160486_c0_seq1 330 422 +;locus=RLOC_00005162
Chr1	stalkie_big_nohaplotig	exon	2306204	2306505	99	+	.	Parent=comp160486_c0_seq1.mrna1;Target=comp160486_c0_seq1 8 307 +
Chr1	stalkie_big_nohaplotig	exon	2306610	2306891	95	+	.	Parent=comp160486_c0_seq1.mrna1;Target=comp160486_c0_seq1 308 592 +
Chr1	stalkie_big_nohaplotig	exon	2306945	2307045	98	+	.	Parent=comp160486_c0_seq1.mrna1;Target=comp160486_c0_seq1 593 692 +
Chr1	stalkie_big_nohaplotig	exon	2307153	2307663	97	+	.	Parent=comp160486_c0_seq1.mrna1;Target=comp160486_c0_seq1 693 1206 +
Chr1	stalkie_big_nohaplotig	CDS	2306632	2306724	.	+	0	Parent=comp160486_c0_seq1.mrna1
Chr1	gffcl	locus	2389986	2391987	.	-	.	ID=RLOC_00005163;geneIDs=comp160266_c1_seq1.path1;transcripts=comp160266_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2389986	2391987	.	-	.	ID=comp160266_c1_seq1.mrna1;geneID=comp160266_c1_seq1.path1;Name=comp160266_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1996;mismatches=6;indels=0;unknowns=0;Target=comp160266_c1_seq1 2002 1 .;CDS_Target=comp160266_c1_seq1 2002 2 .;locus=RLOC_00005163
Chr1	stalkie_big_nohaplotig	exon	2389986	2391987	99	-	.	Parent=comp160266_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	2389986	2391986	.	-	0	Parent=comp160266_c1_seq1.mrna1
Chr1	gffcl	locus	2411956	2413028	.	+	.	ID=RLOC_00005164;geneIDs=FBgn0001258.1.path1;transcripts=FBgn0001258.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2411956	2413028	.	+	.	ID=FBgn0001258.1.mrna1;geneID=FBgn0001258.1.path1;Name=FBgn0001258.1;Dir=sensecoverage=100.0;identity=100.0;matches=1005;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005164
Chr1	stalkie_big_nohaplotig	exon	2411956	2412798	100	+	.	Parent=FBgn0001258.1.mrna1;Target=FBgn0001258.1 1 843 +
Chr1	stalkie_big_nohaplotig	exon	2412867	2413028	100	+	.	Parent=FBgn0001258.1.mrna1;Target=FBgn0001258.1 844 1005 +
Chr1	stalkie_big_nohaplotig	CDS	2411956	2412798	.	+	0	Parent=FBgn0001258.1.mrna1;Target=FBgn0001258.1 1 843 +
Chr1	stalkie_big_nohaplotig	CDS	2412867	2413028	.	+	0	Parent=FBgn0001258.1.mrna1;Target=FBgn0001258.1 844 1005 +
Chr1	gffcl	locus	2433082	2433479	.	+	.	ID=RLOC_00005165;geneIDs=comp149553_c0_seq1.path10;transcripts=comp149553_c0_seq1.mrna10
Chr1	stalkie_big_nohaplotig	mRNA	2433082	2433479	.	+	.	ID=comp149553_c0_seq1.mrna10;geneID=comp149553_c0_seq1.path10;Name=comp149553_c0_seq1;Dir=indeterminatecoverage=88.4;identity=100.0;matches=398;mismatches=0;indels=0;unknowns=0;Target=comp149553_c0_seq1 398 1 .;CDS_Target=comp149553_c0_seq1 384 298 .;locus=RLOC_00005165
Chr1	stalkie_big_nohaplotig	exon	2433082	2433479	100	+	.	Parent=comp149553_c0_seq1.mrna10
Chr1	stalkie_big_nohaplotig	CDS	2433379	2433465	.	+	0	Parent=comp149553_c0_seq1.mrna10
Chr1	gffcl	locus	2434838	2439215	.	-	.	ID=RLOC_00005166;geneIDs=FBgn0004513.1.path1;transcripts=FBgn0004513.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2434838	2439215	.	-	.	ID=FBgn0004513.1.mrna1;geneID=FBgn0004513.1.path1;Name=FBgn0004513.1;Dir=sensecoverage=100.0;identity=99.9;matches=3619;mismatches=5;indels=0;unknowns=0;locus=RLOC_00005166
Chr1	stalkie_big_nohaplotig	exon	2434838	2435110	100	-	.	Parent=FBgn0004513.1.mrna1;Target=FBgn0004513.1 3352 3624 +
Chr1	stalkie_big_nohaplotig	exon	2435181	2435547	100	-	.	Parent=FBgn0004513.1.mrna1;Target=FBgn0004513.1 2985 3351 +
Chr1	stalkie_big_nohaplotig	exon	2435608	2435904	99	-	.	Parent=FBgn0004513.1.mrna1;Target=FBgn0004513.1 2688 2984 +
Chr1	stalkie_big_nohaplotig	exon	2435975	2436683	99	-	.	Parent=FBgn0004513.1.mrna1;Target=FBgn0004513.1 1979 2687 +
Chr1	stalkie_big_nohaplotig	exon	2436743	2437133	100	-	.	Parent=FBgn0004513.1.mrna1;Target=FBgn0004513.1 1588 1978 +
Chr1	stalkie_big_nohaplotig	exon	2437200	2437300	100	-	.	Parent=FBgn0004513.1.mrna1;Target=FBgn0004513.1 1487 1587 +
Chr1	stalkie_big_nohaplotig	exon	2437359	2437815	99	-	.	Parent=FBgn0004513.1.mrna1;Target=FBgn0004513.1 1030 1486 +
Chr1	stalkie_big_nohaplotig	exon	2437871	2438185	100	-	.	Parent=FBgn0004513.1.mrna1;Target=FBgn0004513.1 715 1029 +
Chr1	stalkie_big_nohaplotig	exon	2438245	2438416	100	-	.	Parent=FBgn0004513.1.mrna1;Target=FBgn0004513.1 543 714 +
Chr1	stalkie_big_nohaplotig	exon	2438610	2438855	99	-	.	Parent=FBgn0004513.1.mrna1;Target=FBgn0004513.1 297 542 +
Chr1	stalkie_big_nohaplotig	exon	2438920	2439215	100	-	.	Parent=FBgn0004513.1.mrna1;Target=FBgn0004513.1 1 296 +
Chr1	stalkie_big_nohaplotig	CDS	2434838	2435110	.	-	0	Parent=FBgn0004513.1.mrna1;Target=FBgn0004513.1 3352 3624 +
Chr1	stalkie_big_nohaplotig	CDS	2435181	2435547	.	-	1	Parent=FBgn0004513.1.mrna1;Target=FBgn0004513.1 2985 3351 +
Chr1	stalkie_big_nohaplotig	CDS	2435608	2435904	.	-	1	Parent=FBgn0004513.1.mrna1;Target=FBgn0004513.1 2688 2984 +
Chr1	stalkie_big_nohaplotig	CDS	2435975	2436683	.	-	2	Parent=FBgn0004513.1.mrna1;Target=FBgn0004513.1 1979 2687 +
Chr1	stalkie_big_nohaplotig	CDS	2436743	2437133	.	-	0	Parent=FBgn0004513.1.mrna1;Target=FBgn0004513.1 1588 1978 +
Chr1	stalkie_big_nohaplotig	CDS	2437200	2437300	.	-	2	Parent=FBgn0004513.1.mrna1;Target=FBgn0004513.1 1487 1587 +
Chr1	stalkie_big_nohaplotig	CDS	2437359	2437815	.	-	0	Parent=FBgn0004513.1.mrna1;Target=FBgn0004513.1 1030 1486 +
Chr1	stalkie_big_nohaplotig	CDS	2437871	2438185	.	-	0	Parent=FBgn0004513.1.mrna1;Target=FBgn0004513.1 715 1029 +
Chr1	stalkie_big_nohaplotig	CDS	2438245	2438416	.	-	1	Parent=FBgn0004513.1.mrna1;Target=FBgn0004513.1 543 714 +
Chr1	stalkie_big_nohaplotig	CDS	2438610	2438855	.	-	1	Parent=FBgn0004513.1.mrna1;Target=FBgn0004513.1 297 542 +
Chr1	stalkie_big_nohaplotig	CDS	2438920	2439215	.	-	0	Parent=FBgn0004513.1.mrna1;Target=FBgn0004513.1 1 296 +
Chr1	gffcl	locus	2480429	4132009	.	+	.	ID=RLOC_00005167;geneIDs=comp138376_c1_seq1.path1;transcripts=comp138376_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2480429	4132009	.	+	.	ID=comp138376_c1_seq1.mrna1;geneID=comp138376_c1_seq1.path1;Name=comp138376_c1_seq1;Dir=indeterminatecoverage=80.9;identity=99.4;matches=502;mismatches=3;indels=0;unknowns=0;Target=comp138376_c1_seq1 374 282 .;locus=RLOC_00005167
Chr1	stalkie_big_nohaplotig	exon	2480429	2480916	99	+	.	Parent=comp138376_c1_seq1.mrna1;Target=comp138376_c1_seq1 488 1 .
Chr1	stalkie_big_nohaplotig	exon	4117873	4117875	100	+	.	Parent=comp138376_c1_seq1.mrna1;Target=comp138376_c1_seq1 491 489 .
Chr1	stalkie_big_nohaplotig	exon	4124280	4124285	100	+	.	Parent=comp138376_c1_seq1.mrna1;Target=comp138376_c1_seq1 497 492 .
Chr1	stalkie_big_nohaplotig	exon	4127856	4127858	100	+	.	Parent=comp138376_c1_seq1.mrna1;Target=comp138376_c1_seq1 500 498 .
Chr1	stalkie_big_nohaplotig	exon	4132005	4132009	100	+	.	Parent=comp138376_c1_seq1.mrna1;Target=comp138376_c1_seq1 505 501 .
Chr1	stalkie_big_nohaplotig	CDS	2480710	2480802	.	+	0	Parent=comp138376_c1_seq1.mrna1
Chr1	gffcl	locus	2551084	2551182	.	-	.	ID=RLOC_00005168;geneIDs=FBgn0015766.1.path1;transcripts=FBgn0015766.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2551084	2551182	.	-	.	ID=FBgn0015766.1.mrna1;geneID=FBgn0015766.1.path1;Name=FBgn0015766.1;Dir=indeterminatecoverage=5.9;identity=100.0;matches=99;mismatches=0;indels=0;unknowns=0;Target=FBgn0015766.1 99 1 .;locus=RLOC_00005168
Chr1	stalkie_big_nohaplotig	exon	2551084	2551182	100	-	.	Parent=FBgn0015766.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	2551084	2551182	.	-	0	Parent=FBgn0015766.1.mrna1
Chr1	gffcl	locus	2559006	2560264	.	+	.	ID=RLOC_00005169;geneIDs=comp145779_c0_seq1.path1;transcripts=comp145779_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2559006	2560264	.	+	.	ID=comp145779_c0_seq1.mrna1;geneID=comp145779_c0_seq1.path1;Name=comp145779_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=458;mismatches=0;indels=0;unknowns=0;Target=comp145779_c0_seq1 202 375 +;locus=RLOC_00005169
Chr1	stalkie_big_nohaplotig	exon	2559006	2559153	100	+	.	Parent=comp145779_c0_seq1.mrna1;Target=comp145779_c0_seq1 1 148 +
Chr1	stalkie_big_nohaplotig	exon	2559955	2560264	100	+	.	Parent=comp145779_c0_seq1.mrna1;Target=comp145779_c0_seq1 149 458 +
Chr1	stalkie_big_nohaplotig	CDS	2560008	2560181	.	+	0	Parent=comp145779_c0_seq1.mrna1
Chr1	gffcl	locus	2560772	2564839	.	+	.	ID=RLOC_00005170;geneIDs=comp150521_c1_seq1.path1;transcripts=comp150521_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2560772	2564839	.	+	.	ID=comp150521_c1_seq1.mrna1;geneID=comp150521_c1_seq1.path1;Name=comp150521_c1_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=1157;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005170
Chr1	stalkie_big_nohaplotig	exon	2560772	2561148	100	+	.	Parent=comp150521_c1_seq1.mrna1;Target=comp150521_c1_seq1 377 1 .
Chr1	stalkie_big_nohaplotig	exon	2561217	2561273	100	+	.	Parent=comp150521_c1_seq1.mrna1;Target=comp150521_c1_seq1 434 378 .
Chr1	stalkie_big_nohaplotig	exon	2564117	2564839	100	+	.	Parent=comp150521_c1_seq1.mrna1;Target=comp150521_c1_seq1 1157 435 .
Chr1	stalkie_big_nohaplotig	CDS	2561050	2561148	.	+	0	Parent=comp150521_c1_seq1.mrna1;Target=comp150521_c1_seq1 377 279 .
Chr1	stalkie_big_nohaplotig	CDS	2561217	2561255	.	+	0	Parent=comp150521_c1_seq1.mrna1;Target=comp150521_c1_seq1 416 378 .
Chr1	gffcl	locus	2580267	2580702	.	+	.	ID=RLOC_00005171;geneIDs=comp151625_c0_seq1.path1;transcripts=comp151625_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2580267	2580702	.	+	.	ID=comp151625_c0_seq1.mrna1;geneID=comp151625_c0_seq1.path1;Name=comp151625_c0_seq1;Dir=sensecoverage=50.0;identity=91.1;matches=265;mismatches=19;indels=7;unknowns=0;Target=comp151625_c0_seq1 235 279 +;locus=RLOC_00005171
Chr1	stalkie_big_nohaplotig	exon	2580267	2580441	90	+	.	Parent=comp151625_c0_seq1.mrna1;Target=comp151625_c0_seq1 235 415 +
Chr1	stalkie_big_nohaplotig	exon	2580593	2580702	91	+	.	Parent=comp151625_c0_seq1.mrna1;Target=comp151625_c0_seq1 416 524 +
Chr1	stalkie_big_nohaplotig	CDS	2580267	2580307	.	+	0	Parent=comp151625_c0_seq1.mrna1
Chr1	gffcl	locus	2580871	2582198	.	+	.	ID=RLOC_00005172;geneIDs=comp161164_c0_seq1.path1;transcripts=comp161164_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2580871	2582198	.	+	.	ID=comp161164_c0_seq1.mrna1;geneID=comp161164_c0_seq1.path1;Name=comp161164_c0_seq1;Dir=sensecoverage=99.7;identity=94.0;matches=1068;mismatches=58;indels=10;unknowns=0;Target=comp161164_c0_seq1 888 995 +;locus=RLOC_00005172
Chr1	stalkie_big_nohaplotig	exon	2580871	2581220	91	+	.	Parent=comp161164_c0_seq1.mrna1;Target=comp161164_c0_seq1 1 357 +
Chr1	stalkie_big_nohaplotig	exon	2581280	2581320	97	+	.	Parent=comp161164_c0_seq1.mrna1;Target=comp161164_c0_seq1 358 398 +
Chr1	stalkie_big_nohaplotig	exon	2581404	2581828	94	+	.	Parent=comp161164_c0_seq1.mrna1;Target=comp161164_c0_seq1 399 824 +
Chr1	stalkie_big_nohaplotig	exon	2581888	2582198	95	+	.	Parent=comp161164_c0_seq1.mrna1;Target=comp161164_c0_seq1 825 1135 +
Chr1	stalkie_big_nohaplotig	CDS	2581951	2582058	.	+	0	Parent=comp161164_c0_seq1.mrna1
Chr1	gffcl	locus	2595918	2598049	.	+	.	ID=RLOC_00005173;geneIDs=Dv_FBgn0200634.path1;transcripts=Dv_FBgn0200634.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2595918	2598049	.	+	.	ID=Dv_FBgn0200634.mrna1;geneID=Dv_FBgn0200634.path1;Name=Dv_FBgn0200634;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2132;mismatches=0;indels=1;unknowns=0;Target=Dv_FBgn0200634 2133 1 .;CDS_Target=Dv_FBgn0200634 284 3 .;locus=RLOC_00005173
Chr1	stalkie_big_nohaplotig	exon	2595918	2598049	99	+	.	Parent=Dv_FBgn0200634.mrna1
Chr1	stalkie_big_nohaplotig	CDS	2595920	2596200	.	+	0	Parent=Dv_FBgn0200634.mrna1
Chr1	gffcl	locus	2603471	2607291	.	+	.	ID=RLOC_00005174;geneIDs=FBgn0035622.1.path1;transcripts=FBgn0035622.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2603471	2607291	.	+	.	ID=FBgn0035622.1.mrna1;geneID=FBgn0035622.1.path1;Name=FBgn0035622.1;Dir=sensecoverage=100.0;identity=99.6;matches=1387;mismatches=4;indels=1;unknowns=0;Target=FBgn0035622.1 3 122 +;locus=RLOC_00005174
Chr1	stalkie_big_nohaplotig	exon	2603471	2603754	98	+	.	Parent=FBgn0035622.1.mrna1;Target=FBgn0035622.1 1 285 +
Chr1	stalkie_big_nohaplotig	exon	2603823	2603954	99	+	.	Parent=FBgn0035622.1.mrna1;Target=FBgn0035622.1 286 417 +
Chr1	stalkie_big_nohaplotig	exon	2604510	2604676	100	+	.	Parent=FBgn0035622.1.mrna1;Target=FBgn0035622.1 418 584 +
Chr1	stalkie_big_nohaplotig	exon	2604757	2605191	100	+	.	Parent=FBgn0035622.1.mrna1;Target=FBgn0035622.1 585 1019 +
Chr1	stalkie_big_nohaplotig	exon	2605247	2605477	99	+	.	Parent=FBgn0035622.1.mrna1;Target=FBgn0035622.1 1020 1250 +
Chr1	stalkie_big_nohaplotig	exon	2607150	2607291	100	+	.	Parent=FBgn0035622.1.mrna1;Target=FBgn0035622.1 1251 1392 +
Chr1	stalkie_big_nohaplotig	CDS	2603473	2603591	.	+	0	Parent=FBgn0035622.1.mrna1
Chr1	gffcl	locus	2610312	2616163	.	-	.	ID=RLOC_00005175;geneIDs=FBgn0035695.1.path1;transcripts=FBgn0035695.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2610312	2616163	.	-	.	ID=FBgn0035695.1.mrna1;geneID=FBgn0035695.1.path1;Name=FBgn0035695.1;Dir=sensecoverage=100.0;identity=99.8;matches=3930;mismatches=9;indels=0;unknowns=0;locus=RLOC_00005175
Chr1	stalkie_big_nohaplotig	exon	2610312	2610509	100	-	.	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 3742 3939 +
Chr1	stalkie_big_nohaplotig	exon	2610581	2610822	100	-	.	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 3500 3741 +
Chr1	stalkie_big_nohaplotig	exon	2610884	2610998	100	-	.	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 3385 3499 +
Chr1	stalkie_big_nohaplotig	exon	2611080	2611458	100	-	.	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 3006 3384 +
Chr1	stalkie_big_nohaplotig	exon	2611515	2611811	100	-	.	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 2709 3005 +
Chr1	stalkie_big_nohaplotig	exon	2611872	2612135	100	-	.	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 2445 2708 +
Chr1	stalkie_big_nohaplotig	exon	2612193	2613037	99	-	.	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 1600 2444 +
Chr1	stalkie_big_nohaplotig	exon	2613169	2613269	100	-	.	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 1499 1599 +
Chr1	stalkie_big_nohaplotig	exon	2613327	2613783	99	-	.	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 1042 1498 +
Chr1	stalkie_big_nohaplotig	exon	2613851	2614171	99	-	.	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 721 1041 +
Chr1	stalkie_big_nohaplotig	exon	2614232	2614403	98	-	.	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 549 720 +
Chr1	stalkie_big_nohaplotig	exon	2615547	2615792	99	-	.	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 303 548 +
Chr1	stalkie_big_nohaplotig	exon	2615862	2616163	99	-	.	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 1 302 +
Chr1	stalkie_big_nohaplotig	CDS	2610312	2610509	.	-	0	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 3742 3939 +
Chr1	stalkie_big_nohaplotig	CDS	2610581	2610822	.	-	2	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 3500 3741 +
Chr1	stalkie_big_nohaplotig	CDS	2610884	2610998	.	-	0	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 3385 3499 +
Chr1	stalkie_big_nohaplotig	CDS	2611080	2611458	.	-	1	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 3006 3384 +
Chr1	stalkie_big_nohaplotig	CDS	2611515	2611811	.	-	1	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 2709 3005 +
Chr1	stalkie_big_nohaplotig	CDS	2611872	2612135	.	-	1	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 2445 2708 +
Chr1	stalkie_big_nohaplotig	CDS	2612193	2613037	.	-	0	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 1600 2444 +
Chr1	stalkie_big_nohaplotig	CDS	2613169	2613269	.	-	2	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 1499 1599 +
Chr1	stalkie_big_nohaplotig	CDS	2613327	2613783	.	-	0	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 1042 1498 +
Chr1	stalkie_big_nohaplotig	CDS	2613851	2614171	.	-	0	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 721 1041 +
Chr1	stalkie_big_nohaplotig	CDS	2614232	2614403	.	-	1	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 549 720 +
Chr1	stalkie_big_nohaplotig	CDS	2615547	2615792	.	-	1	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 303 548 +
Chr1	stalkie_big_nohaplotig	CDS	2615862	2616163	.	-	0	Parent=FBgn0035695.1.mrna1;Target=FBgn0035695.1 1 302 +
Chr1	gffcl	locus	2635099	2656661	.	+	.	ID=RLOC_00005176;geneIDs=FBgn0015766.1.path2;transcripts=FBgn0015766.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	2635099	2656661	.	+	.	ID=FBgn0015766.1.mrna2;geneID=FBgn0015766.1.path2;Name=FBgn0015766.1;Dir=sensecoverage=94.1;identity=99.9;matches=1574;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005176
Chr1	stalkie_big_nohaplotig	exon	2635099	2635296	100	+	.	Parent=FBgn0015766.1.mrna2;Target=FBgn0015766.1 100 297 +
Chr1	stalkie_big_nohaplotig	exon	2655038	2655294	100	+	.	Parent=FBgn0015766.1.mrna2;Target=FBgn0015766.1 298 554 +
Chr1	stalkie_big_nohaplotig	exon	2655400	2655991	100	+	.	Parent=FBgn0015766.1.mrna2;Target=FBgn0015766.1 555 1146 +
Chr1	stalkie_big_nohaplotig	exon	2656060	2656567	99	+	.	Parent=FBgn0015766.1.mrna2;Target=FBgn0015766.1 1147 1654 +
Chr1	stalkie_big_nohaplotig	exon	2656642	2656661	100	+	.	Parent=FBgn0015766.1.mrna2;Target=FBgn0015766.1 1655 1674 +
Chr1	stalkie_big_nohaplotig	CDS	2635099	2635296	.	+	0	Parent=FBgn0015766.1.mrna2;Target=FBgn0015766.1 100 297 +
Chr1	stalkie_big_nohaplotig	CDS	2655038	2655294	.	+	0	Parent=FBgn0015766.1.mrna2;Target=FBgn0015766.1 298 554 +
Chr1	stalkie_big_nohaplotig	CDS	2655400	2655991	.	+	1	Parent=FBgn0015766.1.mrna2;Target=FBgn0015766.1 555 1146 +
Chr1	stalkie_big_nohaplotig	CDS	2656060	2656567	.	+	0	Parent=FBgn0015766.1.mrna2;Target=FBgn0015766.1 1147 1654 +
Chr1	stalkie_big_nohaplotig	CDS	2656642	2656661	.	+	2	Parent=FBgn0015766.1.mrna2;Target=FBgn0015766.1 1655 1674 +
Chr1	gffcl	locus	2660159	2660511	.	-	.	ID=RLOC_00005177;geneIDs=FBgn0040239.1.path1;transcripts=FBgn0040239.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2660159	2660511	.	-	.	ID=FBgn0040239.1.mrna1;geneID=FBgn0040239.1.path1;Name=FBgn0040239.1;Dir=sensecoverage=100.0;identity=100.0;matches=276;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005177
Chr1	stalkie_big_nohaplotig	exon	2660159	2660417	100	-	.	Parent=FBgn0040239.1.mrna1;Target=FBgn0040239.1 18 276 +
Chr1	stalkie_big_nohaplotig	exon	2660495	2660511	100	-	.	Parent=FBgn0040239.1.mrna1;Target=FBgn0040239.1 1 17 +
Chr1	stalkie_big_nohaplotig	CDS	2660159	2660417	.	-	1	Parent=FBgn0040239.1.mrna1;Target=FBgn0040239.1 18 276 +
Chr1	stalkie_big_nohaplotig	CDS	2660495	2660511	.	-	0	Parent=FBgn0040239.1.mrna1;Target=FBgn0040239.1 1 17 +
Chr1	gffcl	locus	2663738	2666503	.	-	.	ID=RLOC_00005178;geneIDs=FBgn0035762.1.path1;transcripts=FBgn0035762.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2663738	2666503	.	-	.	ID=FBgn0035762.1.mrna1;geneID=FBgn0035762.1.path1;Name=FBgn0035762.1;Dir=sensecoverage=100.0;identity=100.0;matches=2205;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005178
Chr1	stalkie_big_nohaplotig	exon	2663738	2663921	100	-	.	Parent=FBgn0035762.1.mrna1;Target=FBgn0035762.1 2022 2205 +
Chr1	stalkie_big_nohaplotig	exon	2663981	2664207	100	-	.	Parent=FBgn0035762.1.mrna1;Target=FBgn0035762.1 1795 2021 +
Chr1	stalkie_big_nohaplotig	exon	2664281	2664846	100	-	.	Parent=FBgn0035762.1.mrna1;Target=FBgn0035762.1 1229 1794 +
Chr1	stalkie_big_nohaplotig	exon	2664903	2665128	100	-	.	Parent=FBgn0035762.1.mrna1;Target=FBgn0035762.1 1003 1228 +
Chr1	stalkie_big_nohaplotig	exon	2665190	2665352	100	-	.	Parent=FBgn0035762.1.mrna1;Target=FBgn0035762.1 840 1002 +
Chr1	stalkie_big_nohaplotig	exon	2665407	2665516	100	-	.	Parent=FBgn0035762.1.mrna1;Target=FBgn0035762.1 730 839 +
Chr1	stalkie_big_nohaplotig	exon	2665574	2665694	100	-	.	Parent=FBgn0035762.1.mrna1;Target=FBgn0035762.1 609 729 +
Chr1	stalkie_big_nohaplotig	exon	2665756	2665950	100	-	.	Parent=FBgn0035762.1.mrna1;Target=FBgn0035762.1 414 608 +
Chr1	stalkie_big_nohaplotig	exon	2666016	2666257	100	-	.	Parent=FBgn0035762.1.mrna1;Target=FBgn0035762.1 172 413 +
Chr1	stalkie_big_nohaplotig	exon	2666333	2666503	100	-	.	Parent=FBgn0035762.1.mrna1;Target=FBgn0035762.1 1 171 +
Chr1	stalkie_big_nohaplotig	CDS	2663738	2663921	.	-	1	Parent=FBgn0035762.1.mrna1;Target=FBgn0035762.1 2022 2205 +
Chr1	stalkie_big_nohaplotig	CDS	2663981	2664207	.	-	0	Parent=FBgn0035762.1.mrna1;Target=FBgn0035762.1 1795 2021 +
Chr1	stalkie_big_nohaplotig	CDS	2664281	2664846	.	-	2	Parent=FBgn0035762.1.mrna1;Target=FBgn0035762.1 1229 1794 +
Chr1	stalkie_big_nohaplotig	CDS	2664903	2665128	.	-	0	Parent=FBgn0035762.1.mrna1;Target=FBgn0035762.1 1003 1228 +
Chr1	stalkie_big_nohaplotig	CDS	2665190	2665352	.	-	1	Parent=FBgn0035762.1.mrna1;Target=FBgn0035762.1 840 1002 +
Chr1	stalkie_big_nohaplotig	CDS	2665407	2665516	.	-	0	Parent=FBgn0035762.1.mrna1;Target=FBgn0035762.1 730 839 +
Chr1	stalkie_big_nohaplotig	CDS	2665574	2665694	.	-	1	Parent=FBgn0035762.1.mrna1;Target=FBgn0035762.1 609 729 +
Chr1	stalkie_big_nohaplotig	CDS	2665756	2665950	.	-	1	Parent=FBgn0035762.1.mrna1;Target=FBgn0035762.1 414 608 +
Chr1	stalkie_big_nohaplotig	CDS	2666016	2666257	.	-	0	Parent=FBgn0035762.1.mrna1;Target=FBgn0035762.1 172 413 +
Chr1	stalkie_big_nohaplotig	CDS	2666333	2666503	.	-	0	Parent=FBgn0035762.1.mrna1;Target=FBgn0035762.1 1 171 +
Chr1	gffcl	locus	2666764	2669693	.	+	.	ID=RLOC_00005179;geneIDs=FBgn0035761.1.path1;transcripts=FBgn0035761.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2666764	2669693	.	+	.	ID=FBgn0035761.1.mrna1;geneID=FBgn0035761.1.path1;Name=FBgn0035761.1;Dir=sensecoverage=100.0;identity=99.9;matches=2016;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005179
Chr1	stalkie_big_nohaplotig	exon	2666764	2666944	100	+	.	Parent=FBgn0035761.1.mrna1;Target=FBgn0035761.1 1 181 +
Chr1	stalkie_big_nohaplotig	exon	2667010	2667567	100	+	.	Parent=FBgn0035761.1.mrna1;Target=FBgn0035761.1 182 739 +
Chr1	stalkie_big_nohaplotig	exon	2667629	2668121	100	+	.	Parent=FBgn0035761.1.mrna1;Target=FBgn0035761.1 740 1232 +
Chr1	stalkie_big_nohaplotig	exon	2668180	2668240	100	+	.	Parent=FBgn0035761.1.mrna1;Target=FBgn0035761.1 1233 1293 +
Chr1	stalkie_big_nohaplotig	exon	2668968	2669693	99	+	.	Parent=FBgn0035761.1.mrna1;Target=FBgn0035761.1 1294 2019 +
Chr1	stalkie_big_nohaplotig	CDS	2666764	2666944	.	+	0	Parent=FBgn0035761.1.mrna1;Target=FBgn0035761.1 1 181 +
Chr1	stalkie_big_nohaplotig	CDS	2667010	2667567	.	+	2	Parent=FBgn0035761.1.mrna1;Target=FBgn0035761.1 182 739 +
Chr1	stalkie_big_nohaplotig	CDS	2667629	2668121	.	+	2	Parent=FBgn0035761.1.mrna1;Target=FBgn0035761.1 740 1232 +
Chr1	stalkie_big_nohaplotig	CDS	2668180	2668240	.	+	1	Parent=FBgn0035761.1.mrna1;Target=FBgn0035761.1 1233 1293 +
Chr1	stalkie_big_nohaplotig	CDS	2668968	2669693	.	+	0	Parent=FBgn0035761.1.mrna1;Target=FBgn0035761.1 1294 2019 +
Chr1	gffcl	locus	2717123	2722919	.	+	.	ID=RLOC_00005181;geneIDs=FBgn0026061.1.path1;transcripts=FBgn0026061.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2717123	2722919	.	+	.	ID=FBgn0026061.1.mrna1;geneID=FBgn0026061.1.path1;Name=FBgn0026061.1;Dir=sensecoverage=94.4;identity=99.4;matches=1385;mismatches=9;indels=0;unknowns=0;locus=RLOC_00005181
Chr1	stalkie_big_nohaplotig	exon	2717123	2717296	99	+	.	Parent=FBgn0026061.1.mrna1;Target=FBgn0026061.1 83 256 +
Chr1	stalkie_big_nohaplotig	exon	2718048	2718139	98	+	.	Parent=FBgn0026061.1.mrna1;Target=FBgn0026061.1 257 348 +
Chr1	stalkie_big_nohaplotig	exon	2718249	2718395	100	+	.	Parent=FBgn0026061.1.mrna1;Target=FBgn0026061.1 349 495 +
Chr1	stalkie_big_nohaplotig	exon	2720973	2721062	100	+	.	Parent=FBgn0026061.1.mrna1;Target=FBgn0026061.1 496 585 +
Chr1	stalkie_big_nohaplotig	exon	2721901	2722142	98	+	.	Parent=FBgn0026061.1.mrna1;Target=FBgn0026061.1 586 827 +
Chr1	stalkie_big_nohaplotig	exon	2722210	2722309	100	+	.	Parent=FBgn0026061.1.mrna1;Target=FBgn0026061.1 828 927 +
Chr1	stalkie_big_nohaplotig	exon	2722371	2722919	99	+	.	Parent=FBgn0026061.1.mrna1;Target=FBgn0026061.1 928 1476 +
Chr1	stalkie_big_nohaplotig	CDS	2717125	2717296	.	+	0	Parent=FBgn0026061.1.mrna1;Target=FBgn0026061.1 85 256 +
Chr1	stalkie_big_nohaplotig	CDS	2718048	2718139	.	+	2	Parent=FBgn0026061.1.mrna1;Target=FBgn0026061.1 257 348 +
Chr1	stalkie_big_nohaplotig	CDS	2718249	2718395	.	+	0	Parent=FBgn0026061.1.mrna1;Target=FBgn0026061.1 349 495 +
Chr1	stalkie_big_nohaplotig	CDS	2720973	2721062	.	+	0	Parent=FBgn0026061.1.mrna1;Target=FBgn0026061.1 496 585 +
Chr1	stalkie_big_nohaplotig	CDS	2721901	2722142	.	+	0	Parent=FBgn0026061.1.mrna1;Target=FBgn0026061.1 586 827 +
Chr1	stalkie_big_nohaplotig	CDS	2722210	2722309	.	+	1	Parent=FBgn0026061.1.mrna1;Target=FBgn0026061.1 828 927 +
Chr1	stalkie_big_nohaplotig	CDS	2722371	2722919	.	+	0	Parent=FBgn0026061.1.mrna1;Target=FBgn0026061.1 928 1476 +
Chr1	gffcl	locus	2748052	2749248	.	-	.	ID=RLOC_00005182;geneIDs=ORF1179.path1;transcripts=ORF1179.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2748052	2749248	.	-	.	ID=ORF1179.mrna1;geneID=ORF1179.path1;Name=ORF1179;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1189;mismatches=8;indels=0;unknowns=0;Target=ORF1179 1197 1 .;locus=RLOC_00005182
Chr1	stalkie_big_nohaplotig	exon	2748052	2749248	99	-	.	Parent=ORF1179.mrna1
Chr1	stalkie_big_nohaplotig	CDS	2748052	2749248	.	-	0	Parent=ORF1179.mrna1
Chr1	gffcl	locus	2763256	2764274	.	-	.	ID=RLOC_00005183;geneIDs=comp155472_c0_seq1.path1;transcripts=comp155472_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2763256	2764274	.	-	.	ID=comp155472_c0_seq1.mrna1;geneID=comp155472_c0_seq1.path1;Name=comp155472_c0_seq1;Dir=antisensecoverage=98.4;identity=98.6;matches=724;mismatches=10;indels=0;unknowns=0;Target=comp155472_c0_seq1 311 637 .;locus=RLOC_00005183
Chr1	stalkie_big_nohaplotig	exon	2763256	2763474	98	-	.	Parent=comp155472_c0_seq1.mrna1;Target=comp155472_c0_seq1 1 219 -
Chr1	stalkie_big_nohaplotig	exon	2763529	2763592	100	-	.	Parent=comp155472_c0_seq1.mrna1;Target=comp155472_c0_seq1 220 283 -
Chr1	stalkie_big_nohaplotig	exon	2763824	2764274	98	-	.	Parent=comp155472_c0_seq1.mrna1;Target=comp155472_c0_seq1 284 734 -
Chr1	stalkie_big_nohaplotig	CDS	2763851	2764177	.	-	0	Parent=comp155472_c0_seq1.mrna1
Chr1	gffcl	locus	2768476	3159588	.	+	.	ID=RLOC_00005184;geneIDs=comp160575_c0_seq1.path1;transcripts=comp160575_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2768476	3159588	.	+	.	ID=comp160575_c0_seq1.mrna1;geneID=comp160575_c0_seq1.path1;Name=comp160575_c0_seq1;Dir=antisensecoverage=57.4;identity=99.0;matches=1110;mismatches=7;indels=4;unknowns=0;locus=RLOC_00005184
Chr1	stalkie_big_nohaplotig	exon	2768476	2768481	100	+	.	Parent=comp160575_c0_seq1.mrna1;Target=comp160575_c0_seq1 1149 1154 -
Chr1	stalkie_big_nohaplotig	exon	2771607	2771611	100	+	.	Parent=comp160575_c0_seq1.mrna1;Target=comp160575_c0_seq1 1144 1148 -
Chr1	stalkie_big_nohaplotig	exon	2777476	2777479	100	+	.	Parent=comp160575_c0_seq1.mrna1;Target=comp160575_c0_seq1 1140 1143 -
Chr1	stalkie_big_nohaplotig	exon	2783422	2783426	100	+	.	Parent=comp160575_c0_seq1.mrna1;Target=comp160575_c0_seq1 1135 1139 -
Chr1	stalkie_big_nohaplotig	exon	2787571	2787596	63	+	.	Parent=comp160575_c0_seq1.mrna1;Target=comp160575_c0_seq1 1071 1100 -
Chr1	stalkie_big_nohaplotig	exon	2788249	2788257	100	+	.	Parent=comp160575_c0_seq1.mrna1;Target=comp160575_c0_seq1 1062 1070 -
Chr1	stalkie_big_nohaplotig	exon	2793835	2793838	100	+	.	Parent=comp160575_c0_seq1.mrna1;Target=comp160575_c0_seq1 1058 1061 -
Chr1	stalkie_big_nohaplotig	exon	2800846	2800852	100	+	.	Parent=comp160575_c0_seq1.mrna1;Target=comp160575_c0_seq1 1051 1057 -
Chr1	stalkie_big_nohaplotig	exon	2806482	2806489	100	+	.	Parent=comp160575_c0_seq1.mrna1;Target=comp160575_c0_seq1 1043 1050 -
Chr1	stalkie_big_nohaplotig	exon	2828803	2828804	100	+	.	Parent=comp160575_c0_seq1.mrna1;Target=comp160575_c0_seq1 1041 1042 -
Chr1	stalkie_big_nohaplotig	exon	2834826	2834828	100	+	.	Parent=comp160575_c0_seq1.mrna1;Target=comp160575_c0_seq1 1038 1040 -
Chr1	stalkie_big_nohaplotig	exon	2836643	2836652	100	+	.	Parent=comp160575_c0_seq1.mrna1;Target=comp160575_c0_seq1 1028 1037 -
Chr1	stalkie_big_nohaplotig	exon	3150904	3151478	100	+	.	Parent=comp160575_c0_seq1.mrna1;Target=comp160575_c0_seq1 453 1027 -
Chr1	stalkie_big_nohaplotig	exon	3158996	3159103	100	+	.	Parent=comp160575_c0_seq1.mrna1;Target=comp160575_c0_seq1 345 452 -
Chr1	stalkie_big_nohaplotig	exon	3159173	3159246	100	+	.	Parent=comp160575_c0_seq1.mrna1;Target=comp160575_c0_seq1 271 344 -
Chr1	stalkie_big_nohaplotig	exon	3159319	3159588	100	+	.	Parent=comp160575_c0_seq1.mrna1;Target=comp160575_c0_seq1 1 270 -
Chr1	stalkie_big_nohaplotig	CDS	3151367	3151478	.	+	0	Parent=comp160575_c0_seq1.mrna1;Target=comp160575_c0_seq1 453 564 .
Chr1	stalkie_big_nohaplotig	CDS	3158996	3159103	.	+	2	Parent=comp160575_c0_seq1.mrna1;Target=comp160575_c0_seq1 345 452 .
Chr1	stalkie_big_nohaplotig	CDS	3159173	3159246	.	+	2	Parent=comp160575_c0_seq1.mrna1;Target=comp160575_c0_seq1 271 344 .
Chr1	stalkie_big_nohaplotig	CDS	3159319	3159588	.	+	0	Parent=comp160575_c0_seq1.mrna1;Target=comp160575_c0_seq1 1 270 .
Chr1	gffcl	locus	2779916	2780894	.	+	.	ID=RLOC_00005185;geneIDs=comp149939_c0_seq1.path1;transcripts=comp149939_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2779916	2780894	.	+	.	ID=comp149939_c0_seq1.mrna1;geneID=comp149939_c0_seq1.path1;Name=comp149939_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=915;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005185
Chr1	stalkie_big_nohaplotig	exon	2779916	2780068	100	+	.	Parent=comp149939_c0_seq1.mrna1;Target=comp149939_c0_seq1 1 153 +
Chr1	stalkie_big_nohaplotig	exon	2780133	2780894	100	+	.	Parent=comp149939_c0_seq1.mrna1;Target=comp149939_c0_seq1 154 915 +
Chr1	stalkie_big_nohaplotig	CDS	2780066	2780068	.	+	0	Parent=comp149939_c0_seq1.mrna1;Target=comp149939_c0_seq1 151 153 +
Chr1	stalkie_big_nohaplotig	CDS	2780133	2780780	.	+	0	Parent=comp149939_c0_seq1.mrna1;Target=comp149939_c0_seq1 154 801 +
Chr1	gffcl	locus	2799802	2838156	.	+	.	ID=RLOC_00005186;geneIDs=comp158545_c0_seq1.path1;transcripts=comp158545_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2799802	2838156	.	+	.	ID=comp158545_c0_seq1.mrna1;geneID=comp158545_c0_seq1.path1;Name=comp158545_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=1385;mismatches=5;indels=1;unknowns=0;locus=RLOC_00005186
Chr1	stalkie_big_nohaplotig	exon	2799802	2800068	100	+	.	Parent=comp158545_c0_seq1.mrna1;Target=comp158545_c0_seq1 1 267 +
Chr1	stalkie_big_nohaplotig	exon	2825199	2825330	98	+	.	Parent=comp158545_c0_seq1.mrna1;Target=comp158545_c0_seq1 268 399 +
Chr1	stalkie_big_nohaplotig	exon	2827087	2827311	99	+	.	Parent=comp158545_c0_seq1.mrna1;Target=comp158545_c0_seq1 400 625 +
Chr1	stalkie_big_nohaplotig	exon	2828635	2828746	100	+	.	Parent=comp158545_c0_seq1.mrna1;Target=comp158545_c0_seq1 626 737 +
Chr1	stalkie_big_nohaplotig	exon	2834125	2834264	100	+	.	Parent=comp158545_c0_seq1.mrna1;Target=comp158545_c0_seq1 738 877 +
Chr1	stalkie_big_nohaplotig	exon	2837643	2838156	99	+	.	Parent=comp158545_c0_seq1.mrna1;Target=comp158545_c0_seq1 878 1391 +
Chr1	stalkie_big_nohaplotig	CDS	2825208	2825330	.	+	0	Parent=comp158545_c0_seq1.mrna1;Target=comp158545_c0_seq1 277 399 +
Chr1	stalkie_big_nohaplotig	CDS	2827087	2827112	.	+	0	Parent=comp158545_c0_seq1.mrna1;Target=comp158545_c0_seq1 400 426 +
Chr1	gffcl	locus	2857052	2858272	.	-	.	ID=RLOC_00005187;geneIDs=comp157685_c0_seq1.path1;transcripts=comp157685_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2857052	2858272	.	-	.	ID=comp157685_c0_seq1.mrna1;geneID=comp157685_c0_seq1.path1;Name=comp157685_c0_seq1;Dir=antisensecoverage=97.2;identity=98.4;matches=802;mismatches=13;indels=0;unknowns=0;Target=comp157685_c0_seq1 334 456 .;locus=RLOC_00005187
Chr1	stalkie_big_nohaplotig	exon	2857052	2857285	96	-	.	Parent=comp157685_c0_seq1.mrna1;Target=comp157685_c0_seq1 14 247 -
Chr1	stalkie_big_nohaplotig	exon	2857435	2857639	98	-	.	Parent=comp157685_c0_seq1.mrna1;Target=comp157685_c0_seq1 260 464 -
Chr1	stalkie_big_nohaplotig	exon	2857715	2857863	100	-	.	Parent=comp157685_c0_seq1.mrna1;Target=comp157685_c0_seq1 465 613 -
Chr1	stalkie_big_nohaplotig	exon	2857984	2858013	100	-	.	Parent=comp157685_c0_seq1.mrna1;Target=comp157685_c0_seq1 614 643 -
Chr1	stalkie_big_nohaplotig	exon	2858076	2858272	100	-	.	Parent=comp157685_c0_seq1.mrna1;Target=comp157685_c0_seq1 644 840 -
Chr1	stalkie_big_nohaplotig	CDS	2857509	2857631	.	-	0	Parent=comp157685_c0_seq1.mrna1
Chr1	gffcl	locus	2873630	2893556	.	+	.	ID=RLOC_00005188;geneIDs=FBgn0263131.path1;transcripts=FBgn0263131.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2873630	2893556	.	+	.	ID=FBgn0263131.mrna1;geneID=FBgn0263131.path1;Name=FBgn0263131;Dir=sensecoverage=98.6;identity=99.4;matches=2522;mismatches=13;indels=1;unknowns=0;locus=RLOC_00005188
Chr1	stalkie_big_nohaplotig	exon	2873630	2873774	99	+	.	Parent=FBgn0263131.mrna1;Target=FBgn0263131 36 180 +
Chr1	stalkie_big_nohaplotig	exon	2874097	2874191	97	+	.	Parent=FBgn0263131.mrna1;Target=FBgn0263131 181 275 +
Chr1	stalkie_big_nohaplotig	exon	2874264	2874423	100	+	.	Parent=FBgn0263131.mrna1;Target=FBgn0263131 276 435 +
Chr1	stalkie_big_nohaplotig	exon	2874569	2874666	100	+	.	Parent=FBgn0263131.mrna1;Target=FBgn0263131 436 533 +
Chr1	stalkie_big_nohaplotig	exon	2874854	2874944	98	+	.	Parent=FBgn0263131.mrna1;Target=FBgn0263131 534 624 +
Chr1	stalkie_big_nohaplotig	exon	2875124	2875237	100	+	.	Parent=FBgn0263131.mrna1;Target=FBgn0263131 625 738 +
Chr1	stalkie_big_nohaplotig	exon	2880790	2880951	99	+	.	Parent=FBgn0263131.mrna1;Target=FBgn0263131 739 900 +
Chr1	stalkie_big_nohaplotig	exon	2881159	2881316	100	+	.	Parent=FBgn0263131.mrna1;Target=FBgn0263131 901 1058 +
Chr1	stalkie_big_nohaplotig	exon	2881858	2881991	100	+	.	Parent=FBgn0263131.mrna1;Target=FBgn0263131 1059 1192 +
Chr1	stalkie_big_nohaplotig	exon	2884717	2884826	100	+	.	Parent=FBgn0263131.mrna1;Target=FBgn0263131 1193 1302 +
Chr1	stalkie_big_nohaplotig	exon	2887742	2887911	99	+	.	Parent=FBgn0263131.mrna1;Target=FBgn0263131 1303 1472 +
Chr1	stalkie_big_nohaplotig	exon	2888054	2888235	99	+	.	Parent=FBgn0263131.mrna1;Target=FBgn0263131 1473 1654 +
Chr1	stalkie_big_nohaplotig	exon	2890233	2890357	100	+	.	Parent=FBgn0263131.mrna1;Target=FBgn0263131 1655 1779 +
Chr1	stalkie_big_nohaplotig	exon	2892766	2893556	99	+	.	Parent=FBgn0263131.mrna1;Target=FBgn0263131 1780 2571 +
Chr1	stalkie_big_nohaplotig	CDS	2873631	2873774	.	+	0	Parent=FBgn0263131.mrna1;Target=FBgn0263131 37 180 +
Chr1	stalkie_big_nohaplotig	CDS	2874097	2874191	.	+	0	Parent=FBgn0263131.mrna1;Target=FBgn0263131 181 275 +
Chr1	stalkie_big_nohaplotig	CDS	2874264	2874423	.	+	1	Parent=FBgn0263131.mrna1;Target=FBgn0263131 276 435 +
Chr1	stalkie_big_nohaplotig	CDS	2874569	2874666	.	+	0	Parent=FBgn0263131.mrna1;Target=FBgn0263131 436 533 +
Chr1	stalkie_big_nohaplotig	CDS	2874854	2874944	.	+	1	Parent=FBgn0263131.mrna1;Target=FBgn0263131 534 624 +
Chr1	stalkie_big_nohaplotig	CDS	2875124	2875237	.	+	0	Parent=FBgn0263131.mrna1;Target=FBgn0263131 625 738 +
Chr1	stalkie_big_nohaplotig	CDS	2880790	2880951	.	+	0	Parent=FBgn0263131.mrna1;Target=FBgn0263131 739 900 +
Chr1	stalkie_big_nohaplotig	CDS	2881159	2881316	.	+	0	Parent=FBgn0263131.mrna1;Target=FBgn0263131 901 1058 +
Chr1	stalkie_big_nohaplotig	CDS	2881858	2881991	.	+	1	Parent=FBgn0263131.mrna1;Target=FBgn0263131 1059 1192 +
Chr1	stalkie_big_nohaplotig	CDS	2884717	2884826	.	+	2	Parent=FBgn0263131.mrna1;Target=FBgn0263131 1193 1302 +
Chr1	stalkie_big_nohaplotig	CDS	2887742	2887911	.	+	0	Parent=FBgn0263131.mrna1;Target=FBgn0263131 1303 1472 +
Chr1	stalkie_big_nohaplotig	CDS	2888054	2888235	.	+	1	Parent=FBgn0263131.mrna1;Target=FBgn0263131 1473 1654 +
Chr1	stalkie_big_nohaplotig	CDS	2890233	2890357	.	+	2	Parent=FBgn0263131.mrna1;Target=FBgn0263131 1655 1779 +
Chr1	stalkie_big_nohaplotig	CDS	2892766	2893556	.	+	0	Parent=FBgn0263131.mrna1;Target=FBgn0263131 1780 2571 +
Chr1	gffcl	locus	2894292	2895424	.	-	.	ID=RLOC_00005189;geneIDs=comp159790_c0_seq1.path1;transcripts=comp159790_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2894292	2895424	.	-	.	ID=comp159790_c0_seq1.mrna1;geneID=comp159790_c0_seq1.path1;Name=comp159790_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=1119;mismatches=14;indels=6;unknowns=0;Target=comp159790_c0_seq1 1139 1 .;CDS_Target=comp159790_c0_seq1 216 1 .;locus=RLOC_00005189
Chr1	stalkie_big_nohaplotig	exon	2894292	2895424	98	-	.	Parent=comp159790_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	2895209	2895424	.	-	0	Parent=comp159790_c0_seq1.mrna1
Chr1	gffcl	locus	2898291	2898782	.	+	.	ID=RLOC_00005190;geneIDs=comp74752_c0_seq1.path1;transcripts=comp74752_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2898291	2898782	.	+	.	ID=comp74752_c0_seq1.mrna1;geneID=comp74752_c0_seq1.path1;Name=comp74752_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=489;mismatches=3;indels=0;unknowns=0;Target=comp74752_c0_seq1 492 1 .;CDS_Target=comp74752_c0_seq1 350 252 .;locus=RLOC_00005190
Chr1	stalkie_big_nohaplotig	exon	2898291	2898782	99	+	.	Parent=comp74752_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	2898542	2898640	.	+	0	Parent=comp74752_c0_seq1.mrna1
Chr1	gffcl	locus	2899382	2900055	.	-	.	ID=RLOC_00005191;geneIDs=comp150606_c1_seq1.path1;transcripts=comp150606_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2899382	2900055	.	-	.	ID=comp150606_c1_seq1.mrna1;geneID=comp150606_c1_seq1.path1;Name=comp150606_c1_seq1;Dir=indeterminatecoverage=100.0;identity=92.6;matches=664;mismatches=8;indels=45;unknowns=0;Target=comp150606_c1_seq1 715 1 .;CDS_Target=comp150606_c1_seq1 573 520 .;locus=RLOC_00005191
Chr1	stalkie_big_nohaplotig	exon	2899382	2900055	92	-	.	Parent=comp150606_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	2899524	2899577	.	-	0	Parent=comp150606_c1_seq1.mrna1
Chr1	gffcl	locus	2903377	2912169	.	-	.	ID=RLOC_00005192;geneIDs=FBgn0003515.1.path1;transcripts=FBgn0003515.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2903377	2912169	.	-	.	ID=FBgn0003515.1.mrna1;geneID=FBgn0003515.1.path1;Name=FBgn0003515.1;Dir=sensecoverage=100.0;identity=99.9;matches=2070;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005192
Chr1	stalkie_big_nohaplotig	exon	2903377	2903549	99	-	.	Parent=FBgn0003515.1.mrna1;Target=FBgn0003515.1 1901 2073 +
Chr1	stalkie_big_nohaplotig	exon	2903832	2903932	100	-	.	Parent=FBgn0003515.1.mrna1;Target=FBgn0003515.1 1800 1900 +
Chr1	stalkie_big_nohaplotig	exon	2903997	2904238	99	-	.	Parent=FBgn0003515.1.mrna1;Target=FBgn0003515.1 1558 1799 +
Chr1	stalkie_big_nohaplotig	exon	2904305	2905270	100	-	.	Parent=FBgn0003515.1.mrna1;Target=FBgn0003515.1 592 1557 +
Chr1	stalkie_big_nohaplotig	exon	2906431	2906567	100	-	.	Parent=FBgn0003515.1.mrna1;Target=FBgn0003515.1 455 591 +
Chr1	stalkie_big_nohaplotig	exon	2906707	2906756	100	-	.	Parent=FBgn0003515.1.mrna1;Target=FBgn0003515.1 405 454 +
Chr1	stalkie_big_nohaplotig	exon	2911766	2912169	99	-	.	Parent=FBgn0003515.1.mrna1;Target=FBgn0003515.1 1 404 +
Chr1	stalkie_big_nohaplotig	CDS	2903377	2903549	.	-	2	Parent=FBgn0003515.1.mrna1;Target=FBgn0003515.1 1901 2073 +
Chr1	stalkie_big_nohaplotig	CDS	2903832	2903932	.	-	1	Parent=FBgn0003515.1.mrna1;Target=FBgn0003515.1 1800 1900 +
Chr1	stalkie_big_nohaplotig	CDS	2903997	2904238	.	-	0	Parent=FBgn0003515.1.mrna1;Target=FBgn0003515.1 1558 1799 +
Chr1	stalkie_big_nohaplotig	CDS	2904305	2905270	.	-	0	Parent=FBgn0003515.1.mrna1;Target=FBgn0003515.1 592 1557 +
Chr1	stalkie_big_nohaplotig	CDS	2906431	2906567	.	-	2	Parent=FBgn0003515.1.mrna1;Target=FBgn0003515.1 455 591 +
Chr1	stalkie_big_nohaplotig	CDS	2906707	2906756	.	-	1	Parent=FBgn0003515.1.mrna1;Target=FBgn0003515.1 405 454 +
Chr1	stalkie_big_nohaplotig	CDS	2911766	2912169	.	-	0	Parent=FBgn0003515.1.mrna1;Target=FBgn0003515.1 1 404 +
Chr1	gffcl	locus	2924231	2929940	.	+	.	ID=RLOC_00005193;geneIDs=FBgn0260388.1.path1;transcripts=FBgn0260388.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2924231	2929940	.	+	.	ID=FBgn0260388.1.mrna1;geneID=FBgn0260388.1.path1;Name=FBgn0260388.1;Dir=sensecoverage=100.0;identity=98.9;matches=1602;mismatches=18;indels=0;unknowns=0;locus=RLOC_00005193
Chr1	stalkie_big_nohaplotig	exon	2924231	2924305	98	+	.	Parent=FBgn0260388.1.mrna1;Target=FBgn0260388.1 1 75 +
Chr1	stalkie_big_nohaplotig	exon	2928089	2928340	99	+	.	Parent=FBgn0260388.1.mrna1;Target=FBgn0260388.1 76 327 +
Chr1	stalkie_big_nohaplotig	exon	2928402	2928765	98	+	.	Parent=FBgn0260388.1.mrna1;Target=FBgn0260388.1 328 691 +
Chr1	stalkie_big_nohaplotig	exon	2928822	2928928	100	+	.	Parent=FBgn0260388.1.mrna1;Target=FBgn0260388.1 692 798 +
Chr1	stalkie_big_nohaplotig	exon	2928982	2929320	98	+	.	Parent=FBgn0260388.1.mrna1;Target=FBgn0260388.1 799 1137 +
Chr1	stalkie_big_nohaplotig	exon	2929391	2929716	98	+	.	Parent=FBgn0260388.1.mrna1;Target=FBgn0260388.1 1138 1463 +
Chr1	stalkie_big_nohaplotig	exon	2929784	2929940	100	+	.	Parent=FBgn0260388.1.mrna1;Target=FBgn0260388.1 1464 1620 +
Chr1	stalkie_big_nohaplotig	CDS	2924231	2924305	.	+	0	Parent=FBgn0260388.1.mrna1;Target=FBgn0260388.1 1 75 +
Chr1	stalkie_big_nohaplotig	CDS	2928089	2928340	.	+	0	Parent=FBgn0260388.1.mrna1;Target=FBgn0260388.1 76 327 +
Chr1	stalkie_big_nohaplotig	CDS	2928402	2928765	.	+	0	Parent=FBgn0260388.1.mrna1;Target=FBgn0260388.1 328 691 +
Chr1	stalkie_big_nohaplotig	CDS	2928822	2928928	.	+	2	Parent=FBgn0260388.1.mrna1;Target=FBgn0260388.1 692 798 +
Chr1	stalkie_big_nohaplotig	CDS	2928982	2929320	.	+	0	Parent=FBgn0260388.1.mrna1;Target=FBgn0260388.1 799 1137 +
Chr1	stalkie_big_nohaplotig	CDS	2929391	2929716	.	+	0	Parent=FBgn0260388.1.mrna1;Target=FBgn0260388.1 1138 1463 +
Chr1	stalkie_big_nohaplotig	CDS	2929784	2929940	.	+	1	Parent=FBgn0260388.1.mrna1;Target=FBgn0260388.1 1464 1620 +
Chr1	gffcl	locus	2932741	3127295	.	-	.	ID=RLOC_00005194;geneIDs=FBgn0053158.1.path1;transcripts=FBgn0053158.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2932741	3127295	.	-	.	ID=FBgn0053158.1.mrna1;geneID=FBgn0053158.1.path1;Name=FBgn0053158.1;Dir=sensecoverage=100.0;identity=99.5;matches=3098;mismatches=16;indels=0;unknowns=0;locus=RLOC_00005194
Chr1	stalkie_big_nohaplotig	exon	2932741	2932926	99	-	.	Parent=FBgn0053158.1.mrna1;Target=FBgn0053158.1 2929 3114 +
Chr1	stalkie_big_nohaplotig	exon	2945681	2945865	100	-	.	Parent=FBgn0053158.1.mrna1;Target=FBgn0053158.1 2744 2928 +
Chr1	stalkie_big_nohaplotig	exon	3101452	3101565	100	-	.	Parent=FBgn0053158.1.mrna1;Target=FBgn0053158.1 2630 2743 +
Chr1	stalkie_big_nohaplotig	exon	3101634	3102084	99	-	.	Parent=FBgn0053158.1.mrna1;Target=FBgn0053158.1 2179 2629 +
Chr1	stalkie_big_nohaplotig	exon	3102888	3103232	99	-	.	Parent=FBgn0053158.1.mrna1;Target=FBgn0053158.1 1834 2178 +
Chr1	stalkie_big_nohaplotig	exon	3103297	3103585	98	-	.	Parent=FBgn0053158.1.mrna1;Target=FBgn0053158.1 1545 1833 +
Chr1	stalkie_big_nohaplotig	exon	3103653	3103978	100	-	.	Parent=FBgn0053158.1.mrna1;Target=FBgn0053158.1 1219 1544 +
Chr1	stalkie_big_nohaplotig	exon	3104044	3104336	100	-	.	Parent=FBgn0053158.1.mrna1;Target=FBgn0053158.1 926 1218 +
Chr1	stalkie_big_nohaplotig	exon	3104408	3104738	100	-	.	Parent=FBgn0053158.1.mrna1;Target=FBgn0053158.1 595 925 +
Chr1	stalkie_big_nohaplotig	exon	3104818	3105051	100	-	.	Parent=FBgn0053158.1.mrna1;Target=FBgn0053158.1 361 594 +
Chr1	stalkie_big_nohaplotig	exon	3126936	3127295	98	-	.	Parent=FBgn0053158.1.mrna1;Target=FBgn0053158.1 1 360 +
Chr1	stalkie_big_nohaplotig	CDS	2932741	2932926	.	-	0	Parent=FBgn0053158.1.mrna1;Target=FBgn0053158.1 2929 3114 +
Chr1	stalkie_big_nohaplotig	CDS	2945681	2945865	.	-	2	Parent=FBgn0053158.1.mrna1;Target=FBgn0053158.1 2744 2928 +
Chr1	stalkie_big_nohaplotig	CDS	3101452	3101565	.	-	2	Parent=FBgn0053158.1.mrna1;Target=FBgn0053158.1 2630 2743 +
Chr1	stalkie_big_nohaplotig	CDS	3101634	3102084	.	-	0	Parent=FBgn0053158.1.mrna1;Target=FBgn0053158.1 2179 2629 +
Chr1	stalkie_big_nohaplotig	CDS	3102888	3103232	.	-	0	Parent=FBgn0053158.1.mrna1;Target=FBgn0053158.1 1834 2178 +
Chr1	stalkie_big_nohaplotig	CDS	3103297	3103585	.	-	1	Parent=FBgn0053158.1.mrna1;Target=FBgn0053158.1 1545 1833 +
Chr1	stalkie_big_nohaplotig	CDS	3103653	3103978	.	-	0	Parent=FBgn0053158.1.mrna1;Target=FBgn0053158.1 1219 1544 +
Chr1	stalkie_big_nohaplotig	CDS	3104044	3104336	.	-	2	Parent=FBgn0053158.1.mrna1;Target=FBgn0053158.1 926 1218 +
Chr1	stalkie_big_nohaplotig	CDS	3104408	3104738	.	-	0	Parent=FBgn0053158.1.mrna1;Target=FBgn0053158.1 595 925 +
Chr1	stalkie_big_nohaplotig	CDS	3104818	3105051	.	-	0	Parent=FBgn0053158.1.mrna1;Target=FBgn0053158.1 361 594 +
Chr1	stalkie_big_nohaplotig	CDS	3126936	3127295	.	-	0	Parent=FBgn0053158.1.mrna1;Target=FBgn0053158.1 1 360 +
Chr1	gffcl	locus	2985387	2985923	.	+	.	ID=RLOC_00005196;geneIDs=comp143199_c0_seq1.path1;transcripts=comp143199_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	2985387	2985923	.	+	.	ID=comp143199_c0_seq1.mrna1;geneID=comp143199_c0_seq1.path1;Name=comp143199_c0_seq1;Dir=indeterminatecoverage=96.9;identity=99.4;matches=535;mismatches=2;indels=1;unknowns=0;Target=comp143199_c0_seq1 538 1 .;CDS_Target=comp143199_c0_seq1 536 447 .;locus=RLOC_00005196
Chr1	stalkie_big_nohaplotig	exon	2985387	2985923	99	+	.	Parent=comp143199_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	2985833	2985921	.	+	0	Parent=comp143199_c0_seq1.mrna1
Chr1	gffcl	locus	3034448	3098278	.	+	.	ID=RLOC_00005197;geneIDs=FBgn0261799.path1;transcripts=FBgn0261799.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3034448	3098278	.	+	.	ID=FBgn0261799.mrna1;geneID=FBgn0261799.path1;Name=FBgn0261799;Dir=sensecoverage=100.0;identity=99.6;matches=472;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005197
Chr1	stalkie_big_nohaplotig	exon	3034448	3034558	100	+	.	Parent=FBgn0261799.mrna1;Target=FBgn0261799 1 111 +
Chr1	stalkie_big_nohaplotig	exon	3092570	3092721	98	+	.	Parent=FBgn0261799.mrna1;Target=FBgn0261799 112 263 +
Chr1	stalkie_big_nohaplotig	exon	3093260	3093338	100	+	.	Parent=FBgn0261799.mrna1;Target=FBgn0261799 264 342 +
Chr1	stalkie_big_nohaplotig	exon	3098147	3098278	100	+	.	Parent=FBgn0261799.mrna1;Target=FBgn0261799 343 474 +
Chr1	stalkie_big_nohaplotig	CDS	3034448	3034558	.	+	0	Parent=FBgn0261799.mrna1;Target=FBgn0261799 1 111 +
Chr1	stalkie_big_nohaplotig	CDS	3092570	3092721	.	+	0	Parent=FBgn0261799.mrna1;Target=FBgn0261799 112 263 +
Chr1	stalkie_big_nohaplotig	CDS	3093260	3093338	.	+	1	Parent=FBgn0261799.mrna1;Target=FBgn0261799 264 342 +
Chr1	stalkie_big_nohaplotig	CDS	3098147	3098278	.	+	0	Parent=FBgn0261799.mrna1;Target=FBgn0261799 343 474 +
Chr1	gffcl	locus	3127587	3129593	.	+	.	ID=RLOC_00005199;geneIDs=FBgn0027080.1.path1;transcripts=FBgn0027080.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3127587	3129593	.	+	.	ID=FBgn0027080.1.mrna1;geneID=FBgn0027080.1.path1;Name=FBgn0027080.1;Dir=sensecoverage=100.0;identity=99.6;matches=1668;mismatches=6;indels=0;unknowns=0;locus=RLOC_00005199
Chr1	stalkie_big_nohaplotig	exon	3127587	3127886	100	+	.	Parent=FBgn0027080.1.mrna1;Target=FBgn0027080.1 1 300 +
Chr1	stalkie_big_nohaplotig	exon	3127956	3128394	99	+	.	Parent=FBgn0027080.1.mrna1;Target=FBgn0027080.1 301 739 +
Chr1	stalkie_big_nohaplotig	exon	3128467	3128652	100	+	.	Parent=FBgn0027080.1.mrna1;Target=FBgn0027080.1 740 925 +
Chr1	stalkie_big_nohaplotig	exon	3128718	3128898	100	+	.	Parent=FBgn0027080.1.mrna1;Target=FBgn0027080.1 926 1106 +
Chr1	stalkie_big_nohaplotig	exon	3128952	3129275	99	+	.	Parent=FBgn0027080.1.mrna1;Target=FBgn0027080.1 1107 1430 +
Chr1	stalkie_big_nohaplotig	exon	3129350	3129593	99	+	.	Parent=FBgn0027080.1.mrna1;Target=FBgn0027080.1 1431 1674 +
Chr1	stalkie_big_nohaplotig	CDS	3127587	3127886	.	+	0	Parent=FBgn0027080.1.mrna1;Target=FBgn0027080.1 1 300 +
Chr1	stalkie_big_nohaplotig	CDS	3127956	3128394	.	+	0	Parent=FBgn0027080.1.mrna1;Target=FBgn0027080.1 301 739 +
Chr1	stalkie_big_nohaplotig	CDS	3128467	3128652	.	+	2	Parent=FBgn0027080.1.mrna1;Target=FBgn0027080.1 740 925 +
Chr1	stalkie_big_nohaplotig	CDS	3128718	3128898	.	+	2	Parent=FBgn0027080.1.mrna1;Target=FBgn0027080.1 926 1106 +
Chr1	stalkie_big_nohaplotig	CDS	3128952	3129275	.	+	1	Parent=FBgn0027080.1.mrna1;Target=FBgn0027080.1 1107 1430 +
Chr1	stalkie_big_nohaplotig	CDS	3129350	3129593	.	+	1	Parent=FBgn0027080.1.mrna1;Target=FBgn0027080.1 1431 1674 +
Chr1	gffcl	locus	3131757	3135172	.	+	.	ID=RLOC_00005200;geneIDs=FBgn0036124.1.path1;transcripts=FBgn0036124.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3131757	3135172	.	+	.	ID=FBgn0036124.1.mrna1;geneID=FBgn0036124.1.path1;Name=FBgn0036124.1;Dir=sensecoverage=100.0;identity=97.9;matches=3044;mismatches=22;indels=42;unknowns=0;locus=RLOC_00005200
Chr1	stalkie_big_nohaplotig	exon	3131757	3132068	95	+	.	Parent=FBgn0036124.1.mrna1;Target=FBgn0036124.1 1 324 +
Chr1	stalkie_big_nohaplotig	exon	3132127	3132241	99	+	.	Parent=FBgn0036124.1.mrna1;Target=FBgn0036124.1 325 439 +
Chr1	stalkie_big_nohaplotig	exon	3132294	3132647	98	+	.	Parent=FBgn0036124.1.mrna1;Target=FBgn0036124.1 440 793 +
Chr1	stalkie_big_nohaplotig	exon	3132714	3133949	99	+	.	Parent=FBgn0036124.1.mrna1;Target=FBgn0036124.1 794 2029 +
Chr1	stalkie_big_nohaplotig	exon	3134049	3134882	95	+	.	Parent=FBgn0036124.1.mrna1;Target=FBgn0036124.1 2030 2875 +
Chr1	stalkie_big_nohaplotig	exon	3134949	3135172	99	+	.	Parent=FBgn0036124.1.mrna1;Target=FBgn0036124.1 2876 3099 +
Chr1	stalkie_big_nohaplotig	CDS	3131757	3132068	.	+	0	Parent=FBgn0036124.1.mrna1;Target=FBgn0036124.1 1 324 +
Chr1	stalkie_big_nohaplotig	CDS	3132127	3132241	.	+	0	Parent=FBgn0036124.1.mrna1;Target=FBgn0036124.1 325 439 +
Chr1	stalkie_big_nohaplotig	CDS	3132294	3132647	.	+	2	Parent=FBgn0036124.1.mrna1;Target=FBgn0036124.1 440 793 +
Chr1	stalkie_big_nohaplotig	CDS	3132714	3133949	.	+	2	Parent=FBgn0036124.1.mrna1;Target=FBgn0036124.1 794 2029 +
Chr1	stalkie_big_nohaplotig	CDS	3134049	3134882	.	+	2	Parent=FBgn0036124.1.mrna1;Target=FBgn0036124.1 2030 2875 +
Chr1	stalkie_big_nohaplotig	CDS	3134949	3135172	.	+	2	Parent=FBgn0036124.1.mrna1;Target=FBgn0036124.1 2876 3099 +
Chr1	gffcl	locus	3135708	3137687	.	+	.	ID=RLOC_00005201;geneIDs=FBgn0036629.1.path1;transcripts=FBgn0036629.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3135708	3137687	.	+	.	ID=FBgn0036629.1.mrna1;geneID=FBgn0036629.1.path1;Name=FBgn0036629.1;Dir=sensecoverage=99.9;identity=99.7;matches=1550;mismatches=5;indels=0;unknowns=0;locus=RLOC_00005201
Chr1	stalkie_big_nohaplotig	exon	3135708	3135822	100	+	.	Parent=FBgn0036629.1.mrna1;Target=FBgn0036629.1 1 115 +
Chr1	stalkie_big_nohaplotig	exon	3135876	3136110	99	+	.	Parent=FBgn0036629.1.mrna1;Target=FBgn0036629.1 116 350 +
Chr1	stalkie_big_nohaplotig	exon	3136176	3136586	99	+	.	Parent=FBgn0036629.1.mrna1;Target=FBgn0036629.1 351 761 +
Chr1	stalkie_big_nohaplotig	exon	3136652	3136759	100	+	.	Parent=FBgn0036629.1.mrna1;Target=FBgn0036629.1 762 869 +
Chr1	stalkie_big_nohaplotig	exon	3136817	3136934	99	+	.	Parent=FBgn0036629.1.mrna1;Target=FBgn0036629.1 870 987 +
Chr1	stalkie_big_nohaplotig	exon	3136992	3137152	100	+	.	Parent=FBgn0036629.1.mrna1;Target=FBgn0036629.1 988 1148 +
Chr1	stalkie_big_nohaplotig	exon	3137216	3137513	100	+	.	Parent=FBgn0036629.1.mrna1;Target=FBgn0036629.1 1149 1446 +
Chr1	stalkie_big_nohaplotig	exon	3137579	3137687	98	+	.	Parent=FBgn0036629.1.mrna1;Target=FBgn0036629.1 1447 1555 +
Chr1	stalkie_big_nohaplotig	CDS	3135708	3135822	.	+	0	Parent=FBgn0036629.1.mrna1;Target=FBgn0036629.1 1 115 +
Chr1	stalkie_big_nohaplotig	CDS	3135876	3136110	.	+	2	Parent=FBgn0036629.1.mrna1;Target=FBgn0036629.1 116 350 +
Chr1	stalkie_big_nohaplotig	CDS	3136176	3136586	.	+	1	Parent=FBgn0036629.1.mrna1;Target=FBgn0036629.1 351 761 +
Chr1	stalkie_big_nohaplotig	CDS	3136652	3136759	.	+	1	Parent=FBgn0036629.1.mrna1;Target=FBgn0036629.1 762 869 +
Chr1	stalkie_big_nohaplotig	CDS	3136817	3136934	.	+	1	Parent=FBgn0036629.1.mrna1;Target=FBgn0036629.1 870 987 +
Chr1	stalkie_big_nohaplotig	CDS	3136992	3137152	.	+	0	Parent=FBgn0036629.1.mrna1;Target=FBgn0036629.1 988 1148 +
Chr1	stalkie_big_nohaplotig	CDS	3137216	3137513	.	+	1	Parent=FBgn0036629.1.mrna1;Target=FBgn0036629.1 1149 1446 +
Chr1	stalkie_big_nohaplotig	CDS	3137579	3137686	.	+	0	Parent=FBgn0036629.1.mrna1;Target=FBgn0036629.1 1447 1554 +
Chr1	gffcl	locus	3137813	3138447	.	+	.	ID=RLOC_00005202;geneIDs=comp118537_c0_seq1.path1;transcripts=comp118537_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3137813	3138447	.	+	.	ID=comp118537_c0_seq1.mrna1;geneID=comp118537_c0_seq1.path1;Name=comp118537_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=635;mismatches=0;indels=0;unknowns=0;Target=comp118537_c0_seq1 635 1 .;CDS_Target=comp118537_c0_seq1 51 1 .;locus=RLOC_00005202
Chr1	stalkie_big_nohaplotig	exon	3137813	3138447	100	+	.	Parent=comp118537_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	3137813	3137863	.	+	0	Parent=comp118537_c0_seq1.mrna1
Chr1	gffcl	locus	3138823	3141450	.	-	.	ID=RLOC_00005203;geneIDs=FBgn0028399.1.path1,comp147290_c0_seq1.path1;transcripts=FBgn0028399.1.mrna1,comp147290_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3138823	3141450	.	-	.	ID=FBgn0028399.1.mrna1;geneID=FBgn0028399.1.path1;Name=FBgn0028399.1;Dir=sensecoverage=100.0;identity=99.8;matches=1392;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005203
Chr1	stalkie_big_nohaplotig	exon	3138823	3138958	100	-	.	Parent=FBgn0028399.1.mrna1;Target=FBgn0028399.1 1260 1395 +
Chr1	stalkie_big_nohaplotig	exon	3139187	3139346	100	-	.	Parent=FBgn0028399.1.mrna1;Target=FBgn0028399.1 1100 1259 +
Chr1	stalkie_big_nohaplotig	exon	3139958	3140155	100	-	.	Parent=FBgn0028399.1.mrna1;Target=FBgn0028399.1 902 1099 +
Chr1	stalkie_big_nohaplotig	exon	3140224	3140407	99	-	.	Parent=FBgn0028399.1.mrna1;Target=FBgn0028399.1 718 901 +
Chr1	stalkie_big_nohaplotig	exon	3140464	3140573	98	-	.	Parent=FBgn0028399.1.mrna1;Target=FBgn0028399.1 608 717 +
Chr1	stalkie_big_nohaplotig	exon	3140640	3141195	100	-	.	Parent=FBgn0028399.1.mrna1;Target=FBgn0028399.1 52 607 +
Chr1	stalkie_big_nohaplotig	exon	3141400	3141450	100	-	.	Parent=FBgn0028399.1.mrna1;Target=FBgn0028399.1 1 51 +
Chr1	stalkie_big_nohaplotig	CDS	3138823	3138958	.	-	1	Parent=FBgn0028399.1.mrna1;Target=FBgn0028399.1 1260 1395 +
Chr1	stalkie_big_nohaplotig	CDS	3139187	3139346	.	-	2	Parent=FBgn0028399.1.mrna1;Target=FBgn0028399.1 1100 1259 +
Chr1	stalkie_big_nohaplotig	CDS	3139958	3140155	.	-	2	Parent=FBgn0028399.1.mrna1;Target=FBgn0028399.1 902 1099 +
Chr1	stalkie_big_nohaplotig	CDS	3140224	3140407	.	-	0	Parent=FBgn0028399.1.mrna1;Target=FBgn0028399.1 718 901 +
Chr1	stalkie_big_nohaplotig	CDS	3140464	3140573	.	-	2	Parent=FBgn0028399.1.mrna1;Target=FBgn0028399.1 608 717 +
Chr1	stalkie_big_nohaplotig	CDS	3140640	3141195	.	-	0	Parent=FBgn0028399.1.mrna1;Target=FBgn0028399.1 52 607 +
Chr1	stalkie_big_nohaplotig	CDS	3141400	3141450	.	-	0	Parent=FBgn0028399.1.mrna1;Target=FBgn0028399.1 1 51 +
Chr1	stalkie_big_nohaplotig	mRNA	3139325	3139825	.	-	.	ID=comp147290_c0_seq1.mrna1;geneID=comp147290_c0_seq1.path1;Name=comp147290_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=499;mismatches=2;indels=0;unknowns=0;Target=comp147290_c0_seq1 501 1 .;CDS_Target=comp147290_c0_seq1 209 93 .;locus=RLOC_00005203
Chr1	stalkie_big_nohaplotig	exon	3139325	3139825	99	-	.	Parent=comp147290_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	3139617	3139733	.	-	0	Parent=comp147290_c0_seq1.mrna1
Chr1	gffcl	locus	3142569	3161538	.	+	.	ID=RLOC_00005204;geneIDs=FBgn0001124.1.path1;transcripts=FBgn0001124.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3142569	3161538	.	+	.	ID=FBgn0001124.1.mrna1;geneID=FBgn0001124.1.path1;Name=FBgn0001124.1;Dir=sensecoverage=100.0;identity=99.7;matches=1465;mismatches=5;indels=0;unknowns=0;locus=RLOC_00005204
Chr1	stalkie_big_nohaplotig	exon	3142569	3142753	100	+	.	Parent=FBgn0001124.1.mrna1;Target=FBgn0001124.1 1 185 +
Chr1	stalkie_big_nohaplotig	exon	3143467	3143636	100	+	.	Parent=FBgn0001124.1.mrna1;Target=FBgn0001124.1 186 355 +
Chr1	stalkie_big_nohaplotig	exon	3146353	3146460	100	+	.	Parent=FBgn0001124.1.mrna1;Target=FBgn0001124.1 356 463 +
Chr1	stalkie_big_nohaplotig	exon	3146529	3146602	100	+	.	Parent=FBgn0001124.1.mrna1;Target=FBgn0001124.1 464 537 +
Chr1	stalkie_big_nohaplotig	exon	3146689	3147166	99	+	.	Parent=FBgn0001124.1.mrna1;Target=FBgn0001124.1 538 1015 +
Chr1	stalkie_big_nohaplotig	exon	3147221	3147328	100	+	.	Parent=FBgn0001124.1.mrna1;Target=FBgn0001124.1 1016 1123 +
Chr1	stalkie_big_nohaplotig	exon	3159967	3160024	100	+	.	Parent=FBgn0001124.1.mrna1;Target=FBgn0001124.1 1124 1181 +
Chr1	stalkie_big_nohaplotig	exon	3161184	3161326	99	+	.	Parent=FBgn0001124.1.mrna1;Target=FBgn0001124.1 1182 1324 +
Chr1	stalkie_big_nohaplotig	exon	3161393	3161538	98	+	.	Parent=FBgn0001124.1.mrna1;Target=FBgn0001124.1 1325 1470 +
Chr1	stalkie_big_nohaplotig	CDS	3142569	3142753	.	+	0	Parent=FBgn0001124.1.mrna1;Target=FBgn0001124.1 1 185 +
Chr1	stalkie_big_nohaplotig	CDS	3143467	3143636	.	+	1	Parent=FBgn0001124.1.mrna1;Target=FBgn0001124.1 186 355 +
Chr1	stalkie_big_nohaplotig	CDS	3146353	3146460	.	+	2	Parent=FBgn0001124.1.mrna1;Target=FBgn0001124.1 356 463 +
Chr1	stalkie_big_nohaplotig	CDS	3146529	3146602	.	+	2	Parent=FBgn0001124.1.mrna1;Target=FBgn0001124.1 464 537 +
Chr1	stalkie_big_nohaplotig	CDS	3146689	3147166	.	+	0	Parent=FBgn0001124.1.mrna1;Target=FBgn0001124.1 538 1015 +
Chr1	stalkie_big_nohaplotig	CDS	3147221	3147328	.	+	2	Parent=FBgn0001124.1.mrna1;Target=FBgn0001124.1 1016 1123 +
Chr1	stalkie_big_nohaplotig	CDS	3159967	3160024	.	+	2	Parent=FBgn0001124.1.mrna1;Target=FBgn0001124.1 1124 1181 +
Chr1	stalkie_big_nohaplotig	CDS	3161184	3161326	.	+	1	Parent=FBgn0001124.1.mrna1;Target=FBgn0001124.1 1182 1324 +
Chr1	stalkie_big_nohaplotig	CDS	3161393	3161538	.	+	2	Parent=FBgn0001124.1.mrna1;Target=FBgn0001124.1 1325 1470 +
Chr1	gffcl	locus	3158209	3158814	.	+	.	ID=RLOC_00005205;geneIDs=comp151281_c0_seq1.path1;transcripts=comp151281_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3158209	3158814	.	+	.	ID=comp151281_c0_seq1.mrna1;geneID=comp151281_c0_seq1.path1;Name=comp151281_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=606;mismatches=0;indels=0;unknowns=0;Target=comp151281_c0_seq1 606 1 .;CDS_Target=comp151281_c0_seq1 379 2 .;locus=RLOC_00005205
Chr1	stalkie_big_nohaplotig	exon	3158209	3158814	100	+	.	Parent=comp151281_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	3158210	3158587	.	+	0	Parent=comp151281_c0_seq1.mrna1
Chr1	gffcl	locus	3183177	5095274	.	+	.	ID=RLOC_00005206;geneIDs=comp114735_c1_seq1.path1;transcripts=comp114735_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3183177	5095274	.	+	.	ID=comp114735_c1_seq1.mrna1;geneID=comp114735_c1_seq1.path1;Name=comp114735_c1_seq1;Dir=indeterminatecoverage=88.2;identity=100.0;matches=493;mismatches=0;indels=0;unknowns=0;Target=comp114735_c1_seq1 484 410 .;locus=RLOC_00005206
Chr1	stalkie_big_nohaplotig	exon	3183177	3183662	100	+	.	Parent=comp114735_c1_seq1.mrna1;Target=comp114735_c1_seq1 486 1 .
Chr1	stalkie_big_nohaplotig	exon	5090256	5090260	100	+	.	Parent=comp114735_c1_seq1.mrna1;Target=comp114735_c1_seq1 491 487 .
Chr1	stalkie_big_nohaplotig	exon	5095273	5095274	100	+	.	Parent=comp114735_c1_seq1.mrna1;Target=comp114735_c1_seq1 493 492 .
Chr1	stalkie_big_nohaplotig	CDS	3183586	3183660	.	+	0	Parent=comp114735_c1_seq1.mrna1
Chr1	gffcl	locus	3214696	3241566	.	+	.	ID=RLOC_00005207;geneIDs=FBgn0001104.1.path1;transcripts=FBgn0001104.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3214696	3241566	.	+	.	ID=FBgn0001104.1.mrna1;geneID=FBgn0001104.1.path1;Name=FBgn0001104.1;Dir=sensecoverage=100.0;identity=100.0;matches=1077;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005207
Chr1	stalkie_big_nohaplotig	exon	3214696	3214828	100	+	.	Parent=FBgn0001104.1.mrna1;Target=FBgn0001104.1 1 133 +
Chr1	stalkie_big_nohaplotig	exon	3238855	3239326	100	+	.	Parent=FBgn0001104.1.mrna1;Target=FBgn0001104.1 134 605 +
Chr1	stalkie_big_nohaplotig	exon	3239428	3239522	100	+	.	Parent=FBgn0001104.1.mrna1;Target=FBgn0001104.1 606 700 +
Chr1	stalkie_big_nohaplotig	exon	3239772	3239960	100	+	.	Parent=FBgn0001104.1.mrna1;Target=FBgn0001104.1 701 889 +
Chr1	stalkie_big_nohaplotig	exon	3241379	3241566	100	+	.	Parent=FBgn0001104.1.mrna1;Target=FBgn0001104.1 890 1077 +
Chr1	stalkie_big_nohaplotig	CDS	3214696	3214828	.	+	0	Parent=FBgn0001104.1.mrna1;Target=FBgn0001104.1 1 133 +
Chr1	stalkie_big_nohaplotig	CDS	3238855	3239326	.	+	2	Parent=FBgn0001104.1.mrna1;Target=FBgn0001104.1 134 605 +
Chr1	stalkie_big_nohaplotig	CDS	3239428	3239522	.	+	1	Parent=FBgn0001104.1.mrna1;Target=FBgn0001104.1 606 700 +
Chr1	stalkie_big_nohaplotig	CDS	3239772	3239960	.	+	2	Parent=FBgn0001104.1.mrna1;Target=FBgn0001104.1 701 889 +
Chr1	stalkie_big_nohaplotig	CDS	3241379	3241566	.	+	2	Parent=FBgn0001104.1.mrna1;Target=FBgn0001104.1 890 1077 +
Chr1	gffcl	locus	3247187	3249334	.	-	.	ID=RLOC_00005208;geneIDs=FBgn0035726.1.path1;transcripts=FBgn0035726.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3247187	3249334	.	-	.	ID=FBgn0035726.1.mrna1;geneID=FBgn0035726.1.path1;Name=FBgn0035726.1;Dir=sensecoverage=100.0;identity=99.7;matches=1606;mismatches=5;indels=0;unknowns=0;locus=RLOC_00005208
Chr1	stalkie_big_nohaplotig	exon	3247187	3247305	99	-	.	Parent=FBgn0035726.1.mrna1;Target=FBgn0035726.1 1493 1611 +
Chr1	stalkie_big_nohaplotig	exon	3247371	3247540	99	-	.	Parent=FBgn0035726.1.mrna1;Target=FBgn0035726.1 1323 1492 +
Chr1	stalkie_big_nohaplotig	exon	3247641	3247942	99	-	.	Parent=FBgn0035726.1.mrna1;Target=FBgn0035726.1 1021 1322 +
Chr1	stalkie_big_nohaplotig	exon	3248001	3248139	100	-	.	Parent=FBgn0035726.1.mrna1;Target=FBgn0035726.1 882 1020 +
Chr1	stalkie_big_nohaplotig	exon	3248200	3248335	100	-	.	Parent=FBgn0035726.1.mrna1;Target=FBgn0035726.1 746 881 +
Chr1	stalkie_big_nohaplotig	exon	3248480	3248715	100	-	.	Parent=FBgn0035726.1.mrna1;Target=FBgn0035726.1 510 745 +
Chr1	stalkie_big_nohaplotig	exon	3248771	3248958	100	-	.	Parent=FBgn0035726.1.mrna1;Target=FBgn0035726.1 322 509 +
Chr1	stalkie_big_nohaplotig	exon	3249014	3249334	99	-	.	Parent=FBgn0035726.1.mrna1;Target=FBgn0035726.1 1 321 +
Chr1	stalkie_big_nohaplotig	CDS	3247187	3247305	.	-	2	Parent=FBgn0035726.1.mrna1;Target=FBgn0035726.1 1493 1611 +
Chr1	stalkie_big_nohaplotig	CDS	3247371	3247540	.	-	1	Parent=FBgn0035726.1.mrna1;Target=FBgn0035726.1 1323 1492 +
Chr1	stalkie_big_nohaplotig	CDS	3247641	3247942	.	-	0	Parent=FBgn0035726.1.mrna1;Target=FBgn0035726.1 1021 1322 +
Chr1	stalkie_big_nohaplotig	CDS	3248001	3248139	.	-	1	Parent=FBgn0035726.1.mrna1;Target=FBgn0035726.1 882 1020 +
Chr1	stalkie_big_nohaplotig	CDS	3248200	3248335	.	-	2	Parent=FBgn0035726.1.mrna1;Target=FBgn0035726.1 746 881 +
Chr1	stalkie_big_nohaplotig	CDS	3248480	3248715	.	-	1	Parent=FBgn0035726.1.mrna1;Target=FBgn0035726.1 510 745 +
Chr1	stalkie_big_nohaplotig	CDS	3248771	3248958	.	-	0	Parent=FBgn0035726.1.mrna1;Target=FBgn0035726.1 322 509 +
Chr1	stalkie_big_nohaplotig	CDS	3249014	3249334	.	-	0	Parent=FBgn0035726.1.mrna1;Target=FBgn0035726.1 1 321 +
Chr1	gffcl	locus	3251573	3255195	.	-	.	ID=RLOC_00005209;geneIDs=FBgn0035724.1.path1;transcripts=FBgn0035724.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3251573	3255195	.	-	.	ID=FBgn0035724.1.mrna1;geneID=FBgn0035724.1.path1;Name=FBgn0035724.1;Dir=sensecoverage=100.0;identity=99.8;matches=2294;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005209
Chr1	stalkie_big_nohaplotig	exon	3251573	3251833	100	-	.	Parent=FBgn0035724.1.mrna1;Target=FBgn0035724.1 2038 2298 +
Chr1	stalkie_big_nohaplotig	exon	3251891	3252034	100	-	.	Parent=FBgn0035724.1.mrna1;Target=FBgn0035724.1 1894 2037 +
Chr1	stalkie_big_nohaplotig	exon	3252825	3253062	100	-	.	Parent=FBgn0035724.1.mrna1;Target=FBgn0035724.1 1656 1893 +
Chr1	stalkie_big_nohaplotig	exon	3253124	3253340	100	-	.	Parent=FBgn0035724.1.mrna1;Target=FBgn0035724.1 1439 1655 +
Chr1	stalkie_big_nohaplotig	exon	3253400	3253629	99	-	.	Parent=FBgn0035724.1.mrna1;Target=FBgn0035724.1 1209 1438 +
Chr1	stalkie_big_nohaplotig	exon	3253690	3253862	99	-	.	Parent=FBgn0035724.1.mrna1;Target=FBgn0035724.1 1036 1208 +
Chr1	stalkie_big_nohaplotig	exon	3253917	3254344	99	-	.	Parent=FBgn0035724.1.mrna1;Target=FBgn0035724.1 608 1035 +
Chr1	stalkie_big_nohaplotig	exon	3254418	3254521	100	-	.	Parent=FBgn0035724.1.mrna1;Target=FBgn0035724.1 504 607 +
Chr1	stalkie_big_nohaplotig	exon	3254575	3254675	100	-	.	Parent=FBgn0035724.1.mrna1;Target=FBgn0035724.1 403 503 +
Chr1	stalkie_big_nohaplotig	exon	3254735	3254843	100	-	.	Parent=FBgn0035724.1.mrna1;Target=FBgn0035724.1 294 402 +
Chr1	stalkie_big_nohaplotig	exon	3254903	3255195	99	-	.	Parent=FBgn0035724.1.mrna1;Target=FBgn0035724.1 1 293 +
Chr1	stalkie_big_nohaplotig	CDS	3251573	3251833	.	-	0	Parent=FBgn0035724.1.mrna1;Target=FBgn0035724.1 2038 2298 +
Chr1	stalkie_big_nohaplotig	CDS	3251891	3252034	.	-	0	Parent=FBgn0035724.1.mrna1;Target=FBgn0035724.1 1894 2037 +
Chr1	stalkie_big_nohaplotig	CDS	3252825	3253062	.	-	1	Parent=FBgn0035724.1.mrna1;Target=FBgn0035724.1 1656 1893 +
Chr1	stalkie_big_nohaplotig	CDS	3253124	3253340	.	-	2	Parent=FBgn0035724.1.mrna1;Target=FBgn0035724.1 1439 1655 +
Chr1	stalkie_big_nohaplotig	CDS	3253400	3253629	.	-	1	Parent=FBgn0035724.1.mrna1;Target=FBgn0035724.1 1209 1438 +
Chr1	stalkie_big_nohaplotig	CDS	3253690	3253862	.	-	0	Parent=FBgn0035724.1.mrna1;Target=FBgn0035724.1 1036 1208 +
Chr1	stalkie_big_nohaplotig	CDS	3253917	3254344	.	-	2	Parent=FBgn0035724.1.mrna1;Target=FBgn0035724.1 608 1035 +
Chr1	stalkie_big_nohaplotig	CDS	3254418	3254521	.	-	1	Parent=FBgn0035724.1.mrna1;Target=FBgn0035724.1 504 607 +
Chr1	stalkie_big_nohaplotig	CDS	3254575	3254675	.	-	0	Parent=FBgn0035724.1.mrna1;Target=FBgn0035724.1 403 503 +
Chr1	stalkie_big_nohaplotig	CDS	3254735	3254843	.	-	1	Parent=FBgn0035724.1.mrna1;Target=FBgn0035724.1 294 402 +
Chr1	stalkie_big_nohaplotig	CDS	3254903	3255195	.	-	0	Parent=FBgn0035724.1.mrna1;Target=FBgn0035724.1 1 293 +
Chr1	gffcl	locus	3258091	3271297	.	+	.	ID=RLOC_00005210;geneIDs=FBgn0261445.1.path1;transcripts=FBgn0261445.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3258091	3271297	.	+	.	ID=FBgn0261445.1.mrna1;geneID=FBgn0261445.1.path1;Name=FBgn0261445.1;Dir=sensecoverage=100.0;identity=99.7;matches=1462;mismatches=5;indels=0;unknowns=0;locus=RLOC_00005210
Chr1	stalkie_big_nohaplotig	exon	3258091	3258279	100	+	.	Parent=FBgn0261445.1.mrna1;Target=FBgn0261445.1 1 189 +
Chr1	stalkie_big_nohaplotig	exon	3269821	3269959	97	+	.	Parent=FBgn0261445.1.mrna1;Target=FBgn0261445.1 190 328 +
Chr1	stalkie_big_nohaplotig	exon	3270038	3270687	99	+	.	Parent=FBgn0261445.1.mrna1;Target=FBgn0261445.1 329 978 +
Chr1	stalkie_big_nohaplotig	exon	3270744	3271058	100	+	.	Parent=FBgn0261445.1.mrna1;Target=FBgn0261445.1 979 1293 +
Chr1	stalkie_big_nohaplotig	exon	3271124	3271297	100	+	.	Parent=FBgn0261445.1.mrna1;Target=FBgn0261445.1 1294 1467 +
Chr1	stalkie_big_nohaplotig	CDS	3258091	3258279	.	+	0	Parent=FBgn0261445.1.mrna1;Target=FBgn0261445.1 1 189 +
Chr1	stalkie_big_nohaplotig	CDS	3269821	3269959	.	+	0	Parent=FBgn0261445.1.mrna1;Target=FBgn0261445.1 190 328 +
Chr1	stalkie_big_nohaplotig	CDS	3270038	3270687	.	+	2	Parent=FBgn0261445.1.mrna1;Target=FBgn0261445.1 329 978 +
Chr1	stalkie_big_nohaplotig	CDS	3270744	3271058	.	+	0	Parent=FBgn0261445.1.mrna1;Target=FBgn0261445.1 979 1293 +
Chr1	stalkie_big_nohaplotig	CDS	3271124	3271297	.	+	0	Parent=FBgn0261445.1.mrna1;Target=FBgn0261445.1 1294 1467 +
Chr1	gffcl	locus	3272785	3274694	.	-	.	ID=RLOC_00005211;geneIDs=FBgn0029117.1.path1,comp153556_c0_seq1.path1;transcripts=comp153556_c0_seq1.mrna1,FBgn0029117.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3272785	3274694	.	-	.	ID=comp153556_c0_seq1.mrna1;geneID=comp153556_c0_seq1.path1;Name=comp153556_c0_seq1;Dir=sensecoverage=98.2;identity=99.8;matches=1250;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005211
Chr1	stalkie_big_nohaplotig	exon	3272785	3273226	100	-	.	Parent=comp153556_c0_seq1.mrna1;Target=comp153556_c0_seq1 834 1275 +
Chr1	stalkie_big_nohaplotig	exon	3273285	3273479	100	-	.	Parent=comp153556_c0_seq1.mrna1;Target=comp153556_c0_seq1 639 833 +
Chr1	stalkie_big_nohaplotig	exon	3274080	3274694	99	-	.	Parent=comp153556_c0_seq1.mrna1;Target=comp153556_c0_seq1 24 638 +
Chr1	stalkie_big_nohaplotig	CDS	3272848	3273226	.	-	1	Parent=comp153556_c0_seq1.mrna1;Target=comp153556_c0_seq1 834 1212 +
Chr1	stalkie_big_nohaplotig	CDS	3273285	3273460	.	-	0	Parent=comp153556_c0_seq1.mrna1;Target=comp153556_c0_seq1 658 833 +
Chr1	stalkie_big_nohaplotig	mRNA	3272851	3274484	.	-	.	ID=FBgn0029117.1.mrna1;geneID=FBgn0029117.1.path1;Name=FBgn0029117.1;Dir=sensecoverage=100.0;identity=99.8;matches=919;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005211
Chr1	stalkie_big_nohaplotig	exon	3272851	3273226	100	-	.	Parent=FBgn0029117.1.mrna1;Target=FBgn0029117.1 546 921 +
Chr1	stalkie_big_nohaplotig	exon	3273285	3273479	100	-	.	Parent=FBgn0029117.1.mrna1;Target=FBgn0029117.1 351 545 +
Chr1	stalkie_big_nohaplotig	exon	3274080	3274201	100	-	.	Parent=FBgn0029117.1.mrna1;Target=FBgn0029117.1 229 350 +
Chr1	stalkie_big_nohaplotig	exon	3274257	3274484	99	-	.	Parent=FBgn0029117.1.mrna1;Target=FBgn0029117.1 1 228 +
Chr1	stalkie_big_nohaplotig	CDS	3272851	3273226	.	-	1	Parent=FBgn0029117.1.mrna1;Target=FBgn0029117.1 546 921 +
Chr1	stalkie_big_nohaplotig	CDS	3273285	3273479	.	-	1	Parent=FBgn0029117.1.mrna1;Target=FBgn0029117.1 351 545 +
Chr1	stalkie_big_nohaplotig	CDS	3274080	3274201	.	-	0	Parent=FBgn0029117.1.mrna1;Target=FBgn0029117.1 229 350 +
Chr1	stalkie_big_nohaplotig	CDS	3274257	3274484	.	-	0	Parent=FBgn0029117.1.mrna1;Target=FBgn0029117.1 1 228 +
Chr1	gffcl	locus	3279081	3280612	.	+	.	ID=RLOC_00005212;geneIDs=FBgn0036579.1.path1;transcripts=FBgn0036579.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3279081	3280612	.	+	.	ID=FBgn0036579.1.mrna1;geneID=FBgn0036579.1.path1;Name=FBgn0036579.1;Dir=sensecoverage=100.0;identity=99.3;matches=1311;mismatches=9;indels=0;unknowns=0;locus=RLOC_00005212
Chr1	stalkie_big_nohaplotig	exon	3279081	3279138	100	+	.	Parent=FBgn0036579.1.mrna1;Target=FBgn0036579.1 1 58 +
Chr1	stalkie_big_nohaplotig	exon	3279207	3279494	99	+	.	Parent=FBgn0036579.1.mrna1;Target=FBgn0036579.1 59 346 +
Chr1	stalkie_big_nohaplotig	exon	3279581	3280170	98	+	.	Parent=FBgn0036579.1.mrna1;Target=FBgn0036579.1 347 936 +
Chr1	stalkie_big_nohaplotig	exon	3280229	3280612	99	+	.	Parent=FBgn0036579.1.mrna1;Target=FBgn0036579.1 937 1320 +
Chr1	stalkie_big_nohaplotig	CDS	3279081	3279138	.	+	0	Parent=FBgn0036579.1.mrna1;Target=FBgn0036579.1 1 58 +
Chr1	stalkie_big_nohaplotig	CDS	3279207	3279494	.	+	2	Parent=FBgn0036579.1.mrna1;Target=FBgn0036579.1 59 346 +
Chr1	stalkie_big_nohaplotig	CDS	3279581	3280170	.	+	2	Parent=FBgn0036579.1.mrna1;Target=FBgn0036579.1 347 936 +
Chr1	stalkie_big_nohaplotig	CDS	3280229	3280612	.	+	0	Parent=FBgn0036579.1.mrna1;Target=FBgn0036579.1 937 1320 +
Chr1	gffcl	locus	3281098	3281824	.	-	.	ID=RLOC_00005213;geneIDs=FBgn0036580.1.path1;transcripts=FBgn0036580.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3281098	3281824	.	-	.	ID=FBgn0036580.1.mrna1;geneID=FBgn0036580.1.path1;Name=FBgn0036580.1;Dir=sensecoverage=100.0;identity=99.8;matches=416;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005213
Chr1	stalkie_big_nohaplotig	exon	3281098	3281321	100	-	.	Parent=FBgn0036580.1.mrna1;Target=FBgn0036580.1 194 417 +
Chr1	stalkie_big_nohaplotig	exon	3281381	3281501	99	-	.	Parent=FBgn0036580.1.mrna1;Target=FBgn0036580.1 73 193 +
Chr1	stalkie_big_nohaplotig	exon	3281753	3281824	100	-	.	Parent=FBgn0036580.1.mrna1;Target=FBgn0036580.1 1 72 +
Chr1	stalkie_big_nohaplotig	CDS	3281098	3281321	.	-	2	Parent=FBgn0036580.1.mrna1;Target=FBgn0036580.1 194 417 +
Chr1	stalkie_big_nohaplotig	CDS	3281381	3281501	.	-	0	Parent=FBgn0036580.1.mrna1;Target=FBgn0036580.1 73 193 +
Chr1	stalkie_big_nohaplotig	CDS	3281753	3281824	.	-	0	Parent=FBgn0036580.1.mrna1;Target=FBgn0036580.1 1 72 +
Chr1	gffcl	locus	3284398	3285060	.	+	.	ID=RLOC_00005215;geneIDs=comp149882_c0_seq1.path1;transcripts=comp149882_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3284398	3285060	.	+	.	ID=comp149882_c0_seq1.mrna1;geneID=comp149882_c0_seq1.path1;Name=comp149882_c0_seq1;Dir=sensecoverage=99.8;identity=99.7;matches=597;mismatches=2;indels=0;unknowns=0;Target=comp149882_c0_seq1 127 516 +;locus=RLOC_00005215
Chr1	stalkie_big_nohaplotig	exon	3284398	3284508	99	+	.	Parent=comp149882_c0_seq1.mrna1;Target=comp149882_c0_seq1 2 112 +
Chr1	stalkie_big_nohaplotig	exon	3284573	3285060	99	+	.	Parent=comp149882_c0_seq1.mrna1;Target=comp149882_c0_seq1 113 600 +
Chr1	stalkie_big_nohaplotig	CDS	3284587	3284976	.	+	0	Parent=comp149882_c0_seq1.mrna1
Chr1	gffcl	locus	3287036	3290408	.	.	.	ID=RLOC_00005216;geneIDs=CPIJ017423.1.path1,comp163228_c0_seq1.path2;transcripts=comp163228_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	3287036	3290408	.	+	.	ID=comp163228_c0_seq1.mrna2;geneID=comp163228_c0_seq1.path2;Name=comp163228_c0_seq1;Dir=indeterminatecoverage=95.6;identity=99.0;matches=3356;mismatches=17;indels=16;unknowns=0;Target=comp163228_c0_seq1 3544 156 .;CDS_Target=comp163228_c0_seq1 496 275 .;locus=RLOC_00005216
Chr1	stalkie_big_nohaplotig	exon	3287036	3290408	99	+	.	Parent=comp163228_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	3287155	3287376	.	+	0	Parent=comp163228_c0_seq1.mrna2
Chr1	gffcl	locus	3408679	3413441	.	-	.	ID=RLOC_00005218;geneIDs=FBgn0086377.1.path1;transcripts=FBgn0086377.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3408679	3413441	.	-	.	ID=FBgn0086377.1.mrna1;geneID=FBgn0086377.1.path1;Name=FBgn0086377.1;Dir=sensecoverage=100.0;identity=100.0;matches=873;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005218
Chr1	stalkie_big_nohaplotig	exon	3408679	3408771	100	-	.	Parent=FBgn0086377.1.mrna1;Target=FBgn0086377.1 781 873 +
Chr1	stalkie_big_nohaplotig	exon	3408830	3408985	100	-	.	Parent=FBgn0086377.1.mrna1;Target=FBgn0086377.1 625 780 +
Chr1	stalkie_big_nohaplotig	exon	3409137	3409385	100	-	.	Parent=FBgn0086377.1.mrna1;Target=FBgn0086377.1 376 624 +
Chr1	stalkie_big_nohaplotig	exon	3412939	3413083	100	-	.	Parent=FBgn0086377.1.mrna1;Target=FBgn0086377.1 231 375 +
Chr1	stalkie_big_nohaplotig	exon	3413148	3413217	100	-	.	Parent=FBgn0086377.1.mrna1;Target=FBgn0086377.1 161 230 +
Chr1	stalkie_big_nohaplotig	exon	3413282	3413441	100	-	.	Parent=FBgn0086377.1.mrna1;Target=FBgn0086377.1 1 160 +
Chr1	stalkie_big_nohaplotig	CDS	3408679	3408771	.	-	0	Parent=FBgn0086377.1.mrna1;Target=FBgn0086377.1 781 873 +
Chr1	stalkie_big_nohaplotig	CDS	3408830	3408985	.	-	0	Parent=FBgn0086377.1.mrna1;Target=FBgn0086377.1 625 780 +
Chr1	stalkie_big_nohaplotig	CDS	3409137	3409385	.	-	0	Parent=FBgn0086377.1.mrna1;Target=FBgn0086377.1 376 624 +
Chr1	stalkie_big_nohaplotig	CDS	3412939	3413083	.	-	1	Parent=FBgn0086377.1.mrna1;Target=FBgn0086377.1 231 375 +
Chr1	stalkie_big_nohaplotig	CDS	3413148	3413217	.	-	2	Parent=FBgn0086377.1.mrna1;Target=FBgn0086377.1 161 230 +
Chr1	stalkie_big_nohaplotig	CDS	3413282	3413441	.	-	0	Parent=FBgn0086377.1.mrna1;Target=FBgn0086377.1 1 160 +
Chr1	gffcl	locus	3415032	3418970	.	+	.	ID=RLOC_00005219;geneIDs=FBgn0262716.1.path1;transcripts=FBgn0262716.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3415032	3418970	.	+	.	ID=FBgn0262716.1.mrna1;geneID=FBgn0262716.1.path1;Name=FBgn0262716.1;Dir=sensecoverage=100.0;identity=99.9;matches=1256;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005219
Chr1	stalkie_big_nohaplotig	exon	3415032	3415078	100	+	.	Parent=FBgn0262716.1.mrna1;Target=FBgn0262716.1 1 47 +
Chr1	stalkie_big_nohaplotig	exon	3415204	3415384	100	+	.	Parent=FBgn0262716.1.mrna1;Target=FBgn0262716.1 48 228 +
Chr1	stalkie_big_nohaplotig	exon	3415485	3415691	99	+	.	Parent=FBgn0262716.1.mrna1;Target=FBgn0262716.1 229 435 +
Chr1	stalkie_big_nohaplotig	exon	3415753	3415860	100	+	.	Parent=FBgn0262716.1.mrna1;Target=FBgn0262716.1 436 543 +
Chr1	stalkie_big_nohaplotig	exon	3416077	3416368	100	+	.	Parent=FBgn0262716.1.mrna1;Target=FBgn0262716.1 544 835 +
Chr1	stalkie_big_nohaplotig	exon	3416434	3416678	100	+	.	Parent=FBgn0262716.1.mrna1;Target=FBgn0262716.1 836 1080 +
Chr1	stalkie_big_nohaplotig	exon	3416745	3416828	100	+	.	Parent=FBgn0262716.1.mrna1;Target=FBgn0262716.1 1081 1164 +
Chr1	stalkie_big_nohaplotig	exon	3418878	3418970	100	+	.	Parent=FBgn0262716.1.mrna1;Target=FBgn0262716.1 1165 1257 +
Chr1	stalkie_big_nohaplotig	CDS	3415032	3415078	.	+	0	Parent=FBgn0262716.1.mrna1;Target=FBgn0262716.1 1 47 +
Chr1	stalkie_big_nohaplotig	CDS	3415204	3415384	.	+	1	Parent=FBgn0262716.1.mrna1;Target=FBgn0262716.1 48 228 +
Chr1	stalkie_big_nohaplotig	CDS	3415485	3415691	.	+	0	Parent=FBgn0262716.1.mrna1;Target=FBgn0262716.1 229 435 +
Chr1	stalkie_big_nohaplotig	CDS	3415753	3415860	.	+	0	Parent=FBgn0262716.1.mrna1;Target=FBgn0262716.1 436 543 +
Chr1	stalkie_big_nohaplotig	CDS	3416077	3416368	.	+	0	Parent=FBgn0262716.1.mrna1;Target=FBgn0262716.1 544 835 +
Chr1	stalkie_big_nohaplotig	CDS	3416434	3416678	.	+	2	Parent=FBgn0262716.1.mrna1;Target=FBgn0262716.1 836 1080 +
Chr1	stalkie_big_nohaplotig	CDS	3416745	3416828	.	+	0	Parent=FBgn0262716.1.mrna1;Target=FBgn0262716.1 1081 1164 +
Chr1	stalkie_big_nohaplotig	CDS	3418878	3418970	.	+	0	Parent=FBgn0262716.1.mrna1;Target=FBgn0262716.1 1165 1257 +
Chr1	gffcl	locus	3422051	3425039	.	-	.	ID=RLOC_00005220;geneIDs=FBgn0027549.1.path1;transcripts=FBgn0027549.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3422051	3425039	.	-	.	ID=FBgn0027549.1.mrna1;geneID=FBgn0027549.1.path1;Name=FBgn0027549.1;Dir=sensecoverage=100.0;identity=100.0;matches=2154;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005220
Chr1	stalkie_big_nohaplotig	exon	3422051	3422229	100	-	.	Parent=FBgn0027549.1.mrna1;Target=FBgn0027549.1 1976 2154 +
Chr1	stalkie_big_nohaplotig	exon	3422289	3422506	100	-	.	Parent=FBgn0027549.1.mrna1;Target=FBgn0027549.1 1758 1975 +
Chr1	stalkie_big_nohaplotig	exon	3422577	3422900	100	-	.	Parent=FBgn0027549.1.mrna1;Target=FBgn0027549.1 1434 1757 +
Chr1	stalkie_big_nohaplotig	exon	3422971	3423112	100	-	.	Parent=FBgn0027549.1.mrna1;Target=FBgn0027549.1 1292 1433 +
Chr1	stalkie_big_nohaplotig	exon	3423178	3423585	100	-	.	Parent=FBgn0027549.1.mrna1;Target=FBgn0027549.1 884 1291 +
Chr1	stalkie_big_nohaplotig	exon	3423658	3423965	100	-	.	Parent=FBgn0027549.1.mrna1;Target=FBgn0027549.1 576 883 +
Chr1	stalkie_big_nohaplotig	exon	3424041	3424228	100	-	.	Parent=FBgn0027549.1.mrna1;Target=FBgn0027549.1 388 575 +
Chr1	stalkie_big_nohaplotig	exon	3424314	3424487	100	-	.	Parent=FBgn0027549.1.mrna1;Target=FBgn0027549.1 214 387 +
Chr1	stalkie_big_nohaplotig	exon	3424726	3424913	100	-	.	Parent=FBgn0027549.1.mrna1;Target=FBgn0027549.1 26 213 +
Chr1	stalkie_big_nohaplotig	exon	3425015	3425039	100	-	.	Parent=FBgn0027549.1.mrna1;Target=FBgn0027549.1 1 25 +
Chr1	stalkie_big_nohaplotig	CDS	3422051	3422229	.	-	2	Parent=FBgn0027549.1.mrna1;Target=FBgn0027549.1 1976 2154 +
Chr1	stalkie_big_nohaplotig	CDS	3422289	3422506	.	-	1	Parent=FBgn0027549.1.mrna1;Target=FBgn0027549.1 1758 1975 +
Chr1	stalkie_big_nohaplotig	CDS	3422577	3422900	.	-	1	Parent=FBgn0027549.1.mrna1;Target=FBgn0027549.1 1434 1757 +
Chr1	stalkie_big_nohaplotig	CDS	3422971	3423112	.	-	2	Parent=FBgn0027549.1.mrna1;Target=FBgn0027549.1 1292 1433 +
Chr1	stalkie_big_nohaplotig	CDS	3423178	3423585	.	-	2	Parent=FBgn0027549.1.mrna1;Target=FBgn0027549.1 884 1291 +
Chr1	stalkie_big_nohaplotig	CDS	3423658	3423965	.	-	1	Parent=FBgn0027549.1.mrna1;Target=FBgn0027549.1 576 883 +
Chr1	stalkie_big_nohaplotig	CDS	3424041	3424228	.	-	0	Parent=FBgn0027549.1.mrna1;Target=FBgn0027549.1 388 575 +
Chr1	stalkie_big_nohaplotig	CDS	3424314	3424487	.	-	0	Parent=FBgn0027549.1.mrna1;Target=FBgn0027549.1 214 387 +
Chr1	stalkie_big_nohaplotig	CDS	3424726	3424913	.	-	2	Parent=FBgn0027549.1.mrna1;Target=FBgn0027549.1 26 213 +
Chr1	stalkie_big_nohaplotig	CDS	3425015	3425039	.	-	0	Parent=FBgn0027549.1.mrna1;Target=FBgn0027549.1 1 25 +
Chr1	gffcl	locus	3426863	3427667	.	+	.	ID=RLOC_00005221;geneIDs=FBgn0036291.1.path1;transcripts=FBgn0036291.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3426863	3427667	.	+	.	ID=FBgn0036291.1.mrna1;geneID=FBgn0036291.1.path1;Name=FBgn0036291.1;Dir=sensecoverage=100.0;identity=100.0;matches=672;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005221
Chr1	stalkie_big_nohaplotig	exon	3426863	3426995	100	+	.	Parent=FBgn0036291.1.mrna1;Target=FBgn0036291.1 1 133 +
Chr1	stalkie_big_nohaplotig	exon	3427067	3427118	100	+	.	Parent=FBgn0036291.1.mrna1;Target=FBgn0036291.1 134 185 +
Chr1	stalkie_big_nohaplotig	exon	3427181	3427667	100	+	.	Parent=FBgn0036291.1.mrna1;Target=FBgn0036291.1 186 672 +
Chr1	stalkie_big_nohaplotig	CDS	3426863	3426995	.	+	0	Parent=FBgn0036291.1.mrna1;Target=FBgn0036291.1 1 133 +
Chr1	stalkie_big_nohaplotig	CDS	3427067	3427118	.	+	2	Parent=FBgn0036291.1.mrna1;Target=FBgn0036291.1 134 185 +
Chr1	stalkie_big_nohaplotig	CDS	3427181	3427667	.	+	1	Parent=FBgn0036291.1.mrna1;Target=FBgn0036291.1 186 672 +
Chr1	gffcl	locus	3427769	3429084	.	-	.	ID=RLOC_00005222;geneIDs=FBgn0036292.1.path1;transcripts=FBgn0036292.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3427769	3429084	.	-	.	ID=FBgn0036292.1.mrna1;geneID=FBgn0036292.1.path1;Name=FBgn0036292.1;Dir=sensecoverage=100.0;identity=99.9;matches=1145;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005222
Chr1	stalkie_big_nohaplotig	exon	3427769	3428530	99	-	.	Parent=FBgn0036292.1.mrna1;Target=FBgn0036292.1 385 1146 +
Chr1	stalkie_big_nohaplotig	exon	3428588	3428791	100	-	.	Parent=FBgn0036292.1.mrna1;Target=FBgn0036292.1 181 384 +
Chr1	stalkie_big_nohaplotig	exon	3428845	3428976	100	-	.	Parent=FBgn0036292.1.mrna1;Target=FBgn0036292.1 49 180 +
Chr1	stalkie_big_nohaplotig	exon	3429037	3429084	100	-	.	Parent=FBgn0036292.1.mrna1;Target=FBgn0036292.1 1 48 +
Chr1	stalkie_big_nohaplotig	CDS	3427769	3428530	.	-	0	Parent=FBgn0036292.1.mrna1;Target=FBgn0036292.1 385 1146 +
Chr1	stalkie_big_nohaplotig	CDS	3428588	3428791	.	-	0	Parent=FBgn0036292.1.mrna1;Target=FBgn0036292.1 181 384 +
Chr1	stalkie_big_nohaplotig	CDS	3428845	3428976	.	-	0	Parent=FBgn0036292.1.mrna1;Target=FBgn0036292.1 49 180 +
Chr1	stalkie_big_nohaplotig	CDS	3429037	3429084	.	-	0	Parent=FBgn0036292.1.mrna1;Target=FBgn0036292.1 1 48 +
Chr1	gffcl	locus	3429992	3430599	.	+	.	ID=RLOC_00005223;geneIDs=FBgn0027936.1.path1;transcripts=FBgn0027936.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3429992	3430599	.	+	.	ID=FBgn0027936.1.mrna1;geneID=FBgn0027936.1.path1;Name=FBgn0027936.1;Dir=sensecoverage=100.0;identity=100.0;matches=552;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005223
Chr1	stalkie_big_nohaplotig	exon	3429992	3430116	100	+	.	Parent=FBgn0027936.1.mrna1;Target=FBgn0027936.1 1 125 +
Chr1	stalkie_big_nohaplotig	exon	3430173	3430599	100	+	.	Parent=FBgn0027936.1.mrna1;Target=FBgn0027936.1 126 552 +
Chr1	stalkie_big_nohaplotig	CDS	3429992	3430116	.	+	0	Parent=FBgn0027936.1.mrna1;Target=FBgn0027936.1 1 125 +
Chr1	stalkie_big_nohaplotig	CDS	3430173	3430599	.	+	1	Parent=FBgn0027936.1.mrna1;Target=FBgn0027936.1 126 552 +
Chr1	gffcl	locus	3431075	3431706	.	-	.	ID=RLOC_00005224;geneIDs=FBgn0028913.1.path1;transcripts=FBgn0028913.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3431075	3431706	.	-	.	ID=FBgn0028913.1.mrna1;geneID=FBgn0028913.1.path1;Name=FBgn0028913.1;Dir=sensecoverage=100.0;identity=100.0;matches=510;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005224
Chr1	stalkie_big_nohaplotig	exon	3431075	3431298	100	-	.	Parent=FBgn0028913.1.mrna1;Target=FBgn0028913.1 287 510 +
Chr1	stalkie_big_nohaplotig	exon	3431355	3431543	100	-	.	Parent=FBgn0028913.1.mrna1;Target=FBgn0028913.1 98 286 +
Chr1	stalkie_big_nohaplotig	exon	3431610	3431706	100	-	.	Parent=FBgn0028913.1.mrna1;Target=FBgn0028913.1 1 97 +
Chr1	stalkie_big_nohaplotig	CDS	3431075	3431298	.	-	2	Parent=FBgn0028913.1.mrna1;Target=FBgn0028913.1 287 510 +
Chr1	stalkie_big_nohaplotig	CDS	3431355	3431543	.	-	2	Parent=FBgn0028913.1.mrna1;Target=FBgn0028913.1 98 286 +
Chr1	stalkie_big_nohaplotig	CDS	3431610	3431706	.	-	0	Parent=FBgn0028913.1.mrna1;Target=FBgn0028913.1 1 97 +
Chr1	gffcl	locus	3433307	3434020	.	+	.	ID=RLOC_00005225;geneIDs=FBgn0035475.1.path1;transcripts=FBgn0035475.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3433307	3434020	.	+	.	ID=FBgn0035475.1.mrna1;geneID=FBgn0035475.1.path1;Name=FBgn0035475.1;Dir=sensecoverage=100.0;identity=100.0;matches=660;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005225
Chr1	stalkie_big_nohaplotig	exon	3433307	3433597	100	+	.	Parent=FBgn0035475.1.mrna1;Target=FBgn0035475.1 1 291 +
Chr1	stalkie_big_nohaplotig	exon	3433652	3434020	100	+	.	Parent=FBgn0035475.1.mrna1;Target=FBgn0035475.1 292 660 +
Chr1	stalkie_big_nohaplotig	CDS	3433307	3433597	.	+	0	Parent=FBgn0035475.1.mrna1;Target=FBgn0035475.1 1 291 +
Chr1	stalkie_big_nohaplotig	CDS	3433652	3434020	.	+	0	Parent=FBgn0035475.1.mrna1;Target=FBgn0035475.1 292 660 +
Chr1	gffcl	locus	3453240	3531135	.	.	.	ID=RLOC_00005226;geneIDs=FBgn0004910.1.path1,comp46806_c0_seq1.path1,comp156169_c4_seq1.path1;transcripts=FBgn0004910.1.mrna1,comp46806_c0_seq1.mrna1,comp156169_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3453240	3522936	.	+	.	ID=FBgn0004910.1.mrna1;geneID=FBgn0004910.1.path1;Name=FBgn0004910.1;Dir=sensecoverage=50.6;identity=100.0;matches=340;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005226
Chr1	stalkie_big_nohaplotig	exon	3453240	3453275	100	+	.	Parent=FBgn0004910.1.mrna1;Target=FBgn0004910.1 1 36 +
Chr1	stalkie_big_nohaplotig	exon	3460918	3460956	100	+	.	Parent=FBgn0004910.1.mrna1;Target=FBgn0004910.1 37 75 +
Chr1	stalkie_big_nohaplotig	exon	3461031	3461070	100	+	.	Parent=FBgn0004910.1.mrna1;Target=FBgn0004910.1 76 115 +
Chr1	stalkie_big_nohaplotig	exon	3496818	3496961	100	+	.	Parent=FBgn0004910.1.mrna1;Target=FBgn0004910.1 116 259 +
Chr1	stalkie_big_nohaplotig	exon	3522856	3522936	100	+	.	Parent=FBgn0004910.1.mrna1;Target=FBgn0004910.1 260 340 +
Chr1	stalkie_big_nohaplotig	CDS	3453240	3453275	.	+	0	Parent=FBgn0004910.1.mrna1;Target=FBgn0004910.1 1 36 +
Chr1	stalkie_big_nohaplotig	CDS	3460918	3460956	.	+	0	Parent=FBgn0004910.1.mrna1;Target=FBgn0004910.1 37 75 +
Chr1	stalkie_big_nohaplotig	CDS	3461031	3461070	.	+	0	Parent=FBgn0004910.1.mrna1;Target=FBgn0004910.1 76 115 +
Chr1	stalkie_big_nohaplotig	CDS	3496818	3496961	.	+	2	Parent=FBgn0004910.1.mrna1;Target=FBgn0004910.1 116 259 +
Chr1	stalkie_big_nohaplotig	CDS	3522856	3522936	.	+	2	Parent=FBgn0004910.1.mrna1;Target=FBgn0004910.1 260 340 +
Chr1	stalkie_big_nohaplotig	mRNA	3522641	3522878	.	-	.	ID=comp46806_c0_seq1.mrna1;geneID=comp46806_c0_seq1.path1;Name=comp46806_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=237;mismatches=1;indels=0;unknowns=0;Target=comp46806_c0_seq1 238 1 .;CDS_Target=comp46806_c0_seq1 37 2 .;locus=RLOC_00005226
Chr1	stalkie_big_nohaplotig	exon	3522641	3522878	99	-	.	Parent=comp46806_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	3522842	3522877	.	-	0	Parent=comp46806_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3522927	3531135	.	+	.	ID=comp156169_c4_seq1.mrna1;geneID=comp156169_c4_seq1.path1;Name=comp156169_c4_seq1;Dir=antisensecoverage=18.5;identity=100.0;matches=764;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005226
Chr1	stalkie_big_nohaplotig	exon	3522927	3523030	100	+	.	Parent=comp156169_c4_seq1.mrna1;Target=comp156169_c4_seq1 661 764 -
Chr1	stalkie_big_nohaplotig	exon	3524440	3524588	100	+	.	Parent=comp156169_c4_seq1.mrna1;Target=comp156169_c4_seq1 512 660 -
Chr1	stalkie_big_nohaplotig	exon	3530625	3531135	100	+	.	Parent=comp156169_c4_seq1.mrna1;Target=comp156169_c4_seq1 1 511 -
Chr1	stalkie_big_nohaplotig	CDS	3522927	3523030	.	+	0	Parent=comp156169_c4_seq1.mrna1;Target=comp156169_c4_seq1 661 764 .
Chr1	stalkie_big_nohaplotig	CDS	3524440	3524588	.	+	1	Parent=comp156169_c4_seq1.mrna1;Target=comp156169_c4_seq1 512 660 .
Chr1	stalkie_big_nohaplotig	CDS	3530625	3530647	.	+	2	Parent=comp156169_c4_seq1.mrna1;Target=comp156169_c4_seq1 489 511 .
Chr1	gffcl	locus	3539417	3541147	.	+	.	ID=RLOC_00005227;geneIDs=FBgn0035473.1.path1,comp144522_c0_seq1.path1;transcripts=FBgn0035473.1.mrna1,comp144522_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3539417	3541147	.	+	.	ID=FBgn0035473.1.mrna1;geneID=FBgn0035473.1.path1;Name=FBgn0035473.1;Dir=sensecoverage=100.0;identity=100.0;matches=504;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005227
Chr1	stalkie_big_nohaplotig	exon	3539417	3539569	100	+	.	Parent=FBgn0035473.1.mrna1;Target=FBgn0035473.1 1 153 +
Chr1	stalkie_big_nohaplotig	exon	3539839	3539880	100	+	.	Parent=FBgn0035473.1.mrna1;Target=FBgn0035473.1 154 195 +
Chr1	stalkie_big_nohaplotig	exon	3540839	3541147	100	+	.	Parent=FBgn0035473.1.mrna1;Target=FBgn0035473.1 196 504 +
Chr1	stalkie_big_nohaplotig	CDS	3539417	3539569	.	+	0	Parent=FBgn0035473.1.mrna1;Target=FBgn0035473.1 1 153 +
Chr1	stalkie_big_nohaplotig	CDS	3539839	3539880	.	+	0	Parent=FBgn0035473.1.mrna1;Target=FBgn0035473.1 154 195 +
Chr1	stalkie_big_nohaplotig	CDS	3540839	3541147	.	+	0	Parent=FBgn0035473.1.mrna1;Target=FBgn0035473.1 196 504 +
Chr1	stalkie_big_nohaplotig	mRNA	3539547	3539860	.	+	.	ID=comp144522_c0_seq1.mrna1;geneID=comp144522_c0_seq1.path1;Name=comp144522_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=314;mismatches=0;indels=0;unknowns=0;Target=comp144522_c0_seq1 314 1 .;CDS_Target=comp144522_c0_seq1 91 2 .;locus=RLOC_00005227
Chr1	stalkie_big_nohaplotig	exon	3539547	3539860	100	+	.	Parent=comp144522_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	3539548	3539637	.	+	0	Parent=comp144522_c0_seq1.mrna1
Chr1	gffcl	locus	3541709	3545375	.	-	.	ID=RLOC_00005228;geneIDs=Dv_FBgn0200498.1.path1;transcripts=Dv_FBgn0200498.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3541709	3545375	.	-	.	ID=Dv_FBgn0200498.1.mrna1;geneID=Dv_FBgn0200498.1.path1;Name=Dv_FBgn0200498.1;Dir=sensecoverage=100.0;identity=99.5;matches=3217;mismatches=17;indels=0;unknowns=0;locus=RLOC_00005228
Chr1	stalkie_big_nohaplotig	exon	3541709	3541941	99	-	.	Parent=Dv_FBgn0200498.1.mrna1;Target=Dv_FBgn0200498.1 3002 3234 +
Chr1	stalkie_big_nohaplotig	exon	3542007	3542312	99	-	.	Parent=Dv_FBgn0200498.1.mrna1;Target=Dv_FBgn0200498.1 2696 3001 +
Chr1	stalkie_big_nohaplotig	exon	3542398	3542688	97	-	.	Parent=Dv_FBgn0200498.1.mrna1;Target=Dv_FBgn0200498.1 2405 2695 +
Chr1	stalkie_big_nohaplotig	exon	3542749	3543942	99	-	.	Parent=Dv_FBgn0200498.1.mrna1;Target=Dv_FBgn0200498.1 1211 2404 +
Chr1	stalkie_big_nohaplotig	exon	3544003	3544873	99	-	.	Parent=Dv_FBgn0200498.1.mrna1;Target=Dv_FBgn0200498.1 340 1210 +
Chr1	stalkie_big_nohaplotig	exon	3544928	3545113	100	-	.	Parent=Dv_FBgn0200498.1.mrna1;Target=Dv_FBgn0200498.1 154 339 +
Chr1	stalkie_big_nohaplotig	exon	3545168	3545278	100	-	.	Parent=Dv_FBgn0200498.1.mrna1;Target=Dv_FBgn0200498.1 43 153 +
Chr1	stalkie_big_nohaplotig	exon	3545334	3545375	100	-	.	Parent=Dv_FBgn0200498.1.mrna1;Target=Dv_FBgn0200498.1 1 42 +
Chr1	stalkie_big_nohaplotig	CDS	3541709	3541941	.	-	2	Parent=Dv_FBgn0200498.1.mrna1;Target=Dv_FBgn0200498.1 3002 3234 +
Chr1	stalkie_big_nohaplotig	CDS	3542007	3542312	.	-	2	Parent=Dv_FBgn0200498.1.mrna1;Target=Dv_FBgn0200498.1 2696 3001 +
Chr1	stalkie_big_nohaplotig	CDS	3542398	3542688	.	-	2	Parent=Dv_FBgn0200498.1.mrna1;Target=Dv_FBgn0200498.1 2405 2695 +
Chr1	stalkie_big_nohaplotig	CDS	3542749	3543942	.	-	2	Parent=Dv_FBgn0200498.1.mrna1;Target=Dv_FBgn0200498.1 1211 2404 +
Chr1	stalkie_big_nohaplotig	CDS	3544003	3544873	.	-	0	Parent=Dv_FBgn0200498.1.mrna1;Target=Dv_FBgn0200498.1 340 1210 +
Chr1	stalkie_big_nohaplotig	CDS	3544928	3545113	.	-	0	Parent=Dv_FBgn0200498.1.mrna1;Target=Dv_FBgn0200498.1 154 339 +
Chr1	stalkie_big_nohaplotig	CDS	3545168	3545278	.	-	0	Parent=Dv_FBgn0200498.1.mrna1;Target=Dv_FBgn0200498.1 43 153 +
Chr1	stalkie_big_nohaplotig	CDS	3545334	3545375	.	-	0	Parent=Dv_FBgn0200498.1.mrna1;Target=Dv_FBgn0200498.1 1 42 +
Chr1	gffcl	locus	3546612	3549219	.	-	.	ID=RLOC_00005229;geneIDs=comp146825_c0_seq1.path1;transcripts=comp146825_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3546612	3549219	.	-	.	ID=comp146825_c0_seq1.mrna1;geneID=comp146825_c0_seq1.path1;Name=comp146825_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=880;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005229
Chr1	stalkie_big_nohaplotig	exon	3546612	3547467	100	-	.	Parent=comp146825_c0_seq1.mrna1;Target=comp146825_c0_seq1 1 856 -
Chr1	stalkie_big_nohaplotig	exon	3549196	3549219	100	-	.	Parent=comp146825_c0_seq1.mrna1;Target=comp146825_c0_seq1 857 880 -
Chr1	stalkie_big_nohaplotig	CDS	3547388	3547467	.	-	2	Parent=comp146825_c0_seq1.mrna1;Target=comp146825_c0_seq1 777 856 .
Chr1	stalkie_big_nohaplotig	CDS	3549196	3549217	.	-	0	Parent=comp146825_c0_seq1.mrna1;Target=comp146825_c0_seq1 857 878 .
Chr1	gffcl	locus	3549608	3550706	.	-	.	ID=RLOC_00005230;geneIDs=FBgn0036263.1.path1;transcripts=FBgn0036263.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3549608	3550706	.	-	.	ID=FBgn0036263.1.mrna1;geneID=FBgn0036263.1.path1;Name=FBgn0036263.1;Dir=sensecoverage=100.0;identity=100.0;matches=1041;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005230
Chr1	stalkie_big_nohaplotig	exon	3549608	3550526	100	-	.	Parent=FBgn0036263.1.mrna1;Target=FBgn0036263.1 123 1041 +
Chr1	stalkie_big_nohaplotig	exon	3550585	3550706	100	-	.	Parent=FBgn0036263.1.mrna1;Target=FBgn0036263.1 1 122 +
Chr1	stalkie_big_nohaplotig	CDS	3549608	3550526	.	-	1	Parent=FBgn0036263.1.mrna1;Target=FBgn0036263.1 123 1041 +
Chr1	stalkie_big_nohaplotig	CDS	3550585	3550706	.	-	0	Parent=FBgn0036263.1.mrna1;Target=FBgn0036263.1 1 122 +
Chr1	gffcl	locus	3584573	3584844	.	-	.	ID=RLOC_00005231;geneIDs=comp1245035_c0_seq1.path1;transcripts=comp1245035_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3584573	3584844	.	-	.	ID=comp1245035_c0_seq1.mrna1;geneID=comp1245035_c0_seq1.path1;Name=comp1245035_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.9;matches=269;mismatches=3;indels=0;unknowns=0;Target=comp1245035_c0_seq1 273 2 .;CDS_Target=comp1245035_c0_seq1 133 23 .;locus=RLOC_00005231
Chr1	stalkie_big_nohaplotig	exon	3584573	3584844	98	-	.	Parent=comp1245035_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	3584713	3584823	.	-	0	Parent=comp1245035_c0_seq1.mrna1
Chr1	gffcl	locus	3597624	3624667	.	+	.	ID=RLOC_00005232;geneIDs=FBgn0262579.1.path1,comp135413_c0_seq1.path1,comp144132_c0_seq1.path1,comp149126_c0_seq1.path1,comp162002_c0_seq1.path1;transcripts=comp162002_c0_seq1.mrna1,FBgn0262579.1.mrna1,comp149126_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3598117	3624667	.	+	.	ID=comp162002_c0_seq1.mrna1;geneID=comp162002_c0_seq1.path1;Name=comp162002_c0_seq1;Dir=sensecoverage=95.2;identity=99.8;matches=5997;mismatches=2;indels=8;unknowns=0;locus=RLOC_00005232
Chr1	stalkie_big_nohaplotig	exon	3598117	3598863	100	+	.	Parent=comp162002_c0_seq1.mrna1;Target=comp162002_c0_seq1 284 1030 +
Chr1	stalkie_big_nohaplotig	exon	3605673	3605920	100	+	.	Parent=comp162002_c0_seq1.mrna1;Target=comp162002_c0_seq1 1031 1278 +
Chr1	stalkie_big_nohaplotig	exon	3605983	3606364	100	+	.	Parent=comp162002_c0_seq1.mrna1;Target=comp162002_c0_seq1 1279 1660 +
Chr1	stalkie_big_nohaplotig	exon	3616838	3618739	100	+	.	Parent=comp162002_c0_seq1.mrna1;Target=comp162002_c0_seq1 1661 3562 +
Chr1	stalkie_big_nohaplotig	exon	3618812	3618991	100	+	.	Parent=comp162002_c0_seq1.mrna1;Target=comp162002_c0_seq1 3563 3742 +
Chr1	stalkie_big_nohaplotig	exon	3619050	3619219	100	+	.	Parent=comp162002_c0_seq1.mrna1;Target=comp162002_c0_seq1 3743 3912 +
Chr1	stalkie_big_nohaplotig	exon	3619353	3620870	100	+	.	Parent=comp162002_c0_seq1.mrna1;Target=comp162002_c0_seq1 3913 5430 +
Chr1	stalkie_big_nohaplotig	exon	3623816	3624667	98	+	.	Parent=comp162002_c0_seq1.mrna1;Target=comp162002_c0_seq1 5432 6291 +
Chr1	stalkie_big_nohaplotig	CDS	3605784	3605920	.	+	0	Parent=comp162002_c0_seq1.mrna1;Target=comp162002_c0_seq1 1142 1278 +
Chr1	stalkie_big_nohaplotig	CDS	3605983	3606364	.	+	1	Parent=comp162002_c0_seq1.mrna1;Target=comp162002_c0_seq1 1279 1660 +
Chr1	stalkie_big_nohaplotig	CDS	3616838	3618739	.	+	0	Parent=comp162002_c0_seq1.mrna1;Target=comp162002_c0_seq1 1661 3562 +
Chr1	stalkie_big_nohaplotig	CDS	3618812	3618991	.	+	0	Parent=comp162002_c0_seq1.mrna1;Target=comp162002_c0_seq1 3563 3742 +
Chr1	stalkie_big_nohaplotig	CDS	3619050	3619219	.	+	0	Parent=comp162002_c0_seq1.mrna1;Target=comp162002_c0_seq1 3743 3912 +
Chr1	stalkie_big_nohaplotig	CDS	3619353	3619587	.	+	1	Parent=comp162002_c0_seq1.mrna1;Target=comp162002_c0_seq1 3913 4147 +
Chr1	stalkie_big_nohaplotig	mRNA	3605671	3624463	.	+	.	ID=FBgn0262579.1.mrna1;geneID=FBgn0262579.1.path1;Name=FBgn0262579.1;Dir=sensecoverage=100.0;identity=100.0;matches=4175;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005232
Chr1	stalkie_big_nohaplotig	exon	3605671	3605920	100	+	.	Parent=FBgn0262579.1.mrna1;Target=FBgn0262579.1 2 251 +
Chr1	stalkie_big_nohaplotig	exon	3605983	3606364	100	+	.	Parent=FBgn0262579.1.mrna1;Target=FBgn0262579.1 252 633 +
Chr1	stalkie_big_nohaplotig	exon	3616838	3618739	100	+	.	Parent=FBgn0262579.1.mrna1;Target=FBgn0262579.1 634 2535 +
Chr1	stalkie_big_nohaplotig	exon	3618812	3618991	100	+	.	Parent=FBgn0262579.1.mrna1;Target=FBgn0262579.1 2536 2715 +
Chr1	stalkie_big_nohaplotig	exon	3619050	3619219	100	+	.	Parent=FBgn0262579.1.mrna1;Target=FBgn0262579.1 2716 2885 +
Chr1	stalkie_big_nohaplotig	exon	3619353	3619531	100	+	.	Parent=FBgn0262579.1.mrna1;Target=FBgn0262579.1 2886 3064 +
Chr1	stalkie_big_nohaplotig	exon	3619841	3620870	100	+	.	Parent=FBgn0262579.1.mrna1;Target=FBgn0262579.1 3065 4094 +
Chr1	stalkie_big_nohaplotig	exon	3624382	3624463	100	+	.	Parent=FBgn0262579.1.mrna1;Target=FBgn0262579.1 4095 4176 +
Chr1	stalkie_big_nohaplotig	CDS	3605673	3605920	.	+	0	Parent=FBgn0262579.1.mrna1;Target=FBgn0262579.1 4 251 +
Chr1	stalkie_big_nohaplotig	CDS	3605983	3606364	.	+	1	Parent=FBgn0262579.1.mrna1;Target=FBgn0262579.1 252 633 +
Chr1	stalkie_big_nohaplotig	CDS	3616838	3618739	.	+	0	Parent=FBgn0262579.1.mrna1;Target=FBgn0262579.1 634 2535 +
Chr1	stalkie_big_nohaplotig	CDS	3618812	3618991	.	+	0	Parent=FBgn0262579.1.mrna1;Target=FBgn0262579.1 2536 2715 +
Chr1	stalkie_big_nohaplotig	CDS	3619050	3619219	.	+	0	Parent=FBgn0262579.1.mrna1;Target=FBgn0262579.1 2716 2885 +
Chr1	stalkie_big_nohaplotig	CDS	3619353	3619531	.	+	1	Parent=FBgn0262579.1.mrna1;Target=FBgn0262579.1 2886 3064 +
Chr1	stalkie_big_nohaplotig	CDS	3619841	3620870	.	+	2	Parent=FBgn0262579.1.mrna1;Target=FBgn0262579.1 3065 4094 +
Chr1	stalkie_big_nohaplotig	CDS	3624382	3624463	.	+	1	Parent=FBgn0262579.1.mrna1;Target=FBgn0262579.1 4095 4176 +
Chr1	stalkie_big_nohaplotig	mRNA	3620847	3622207	.	+	.	ID=comp149126_c0_seq1.mrna1;geneID=comp149126_c0_seq1.path1;Name=comp149126_c0_seq1;Dir=indeterminatecoverage=92.7;identity=99.9;matches=1361;mismatches=0;indels=1;unknowns=0;Target=comp149126_c0_seq1 1362 1 .;CDS_Target=comp149126_c0_seq1 349 290 .;locus=RLOC_00005232
Chr1	stalkie_big_nohaplotig	exon	3620847	3622207	99	+	.	Parent=comp149126_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	3621136	3621195	.	+	0	Parent=comp149126_c0_seq1.mrna1
Chr1	gffcl	locus	3622934	3623645	.	-	.	ID=RLOC_00005233;geneIDs=comp144846_c0_seq1.path1;transcripts=comp144846_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3622934	3623645	.	-	.	ID=comp144846_c0_seq1.mrna1;geneID=comp144846_c0_seq1.path1;Name=comp144846_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=703;mismatches=9;indels=9;unknowns=0;Target=comp144846_c0_seq1 721 1 .;CDS_Target=comp144846_c0_seq1 409 296 .;locus=RLOC_00005233
Chr1	stalkie_big_nohaplotig	exon	3622934	3623645	97	-	.	Parent=comp144846_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	3623237	3623350	.	-	0	Parent=comp144846_c0_seq1.mrna1
Chr1	gffcl	locus	3650137	3650842	.	+	.	ID=RLOC_00005234;geneIDs=comp118603_c0_seq1.path1;transcripts=comp118603_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3650137	3650842	.	+	.	ID=comp118603_c0_seq1.mrna1;geneID=comp118603_c0_seq1.path1;Name=comp118603_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=706;mismatches=0;indels=0;unknowns=0;Target=comp118603_c0_seq1 706 1 .;CDS_Target=comp118603_c0_seq1 250 179 .;locus=RLOC_00005234
Chr1	stalkie_big_nohaplotig	exon	3650137	3650842	100	+	.	Parent=comp118603_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	3650315	3650386	.	+	0	Parent=comp118603_c0_seq1.mrna1
Chr1	gffcl	locus	3651097	3654232	.	.	.	ID=RLOC_00005235;geneIDs=FBgn0022709.1.path1,comp134993_c0_seq1.path1,comp156028_c0_seq1.path1;transcripts=FBgn0022709.1.mrna1,comp134993_c0_seq1.mrna1,comp156028_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3651097	3654232	.	+	.	ID=FBgn0022709.1.mrna1;geneID=FBgn0022709.1.path1;Name=FBgn0022709.1;Dir=sensecoverage=94.2;identity=100.0;matches=681;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005235
Chr1	stalkie_big_nohaplotig	exon	3651097	3651180	100	+	.	Parent=FBgn0022709.1.mrna1;Target=FBgn0022709.1 43 126 +
Chr1	stalkie_big_nohaplotig	exon	3651607	3651872	100	+	.	Parent=FBgn0022709.1.mrna1;Target=FBgn0022709.1 127 392 +
Chr1	stalkie_big_nohaplotig	exon	3651943	3652027	100	+	.	Parent=FBgn0022709.1.mrna1;Target=FBgn0022709.1 393 477 +
Chr1	stalkie_big_nohaplotig	exon	3653917	3654066	100	+	.	Parent=FBgn0022709.1.mrna1;Target=FBgn0022709.1 478 627 +
Chr1	stalkie_big_nohaplotig	exon	3654137	3654232	100	+	.	Parent=FBgn0022709.1.mrna1;Target=FBgn0022709.1 628 723 +
Chr1	stalkie_big_nohaplotig	CDS	3651097	3651180	.	+	0	Parent=FBgn0022709.1.mrna1;Target=FBgn0022709.1 43 126 +
Chr1	stalkie_big_nohaplotig	CDS	3651607	3651872	.	+	0	Parent=FBgn0022709.1.mrna1;Target=FBgn0022709.1 127 392 +
Chr1	stalkie_big_nohaplotig	CDS	3651943	3652027	.	+	1	Parent=FBgn0022709.1.mrna1;Target=FBgn0022709.1 393 477 +
Chr1	stalkie_big_nohaplotig	CDS	3653917	3654066	.	+	0	Parent=FBgn0022709.1.mrna1;Target=FBgn0022709.1 478 627 +
Chr1	stalkie_big_nohaplotig	CDS	3654137	3654232	.	+	0	Parent=FBgn0022709.1.mrna1;Target=FBgn0022709.1 628 723 +
Chr1	stalkie_big_nohaplotig	mRNA	3651157	3651651	.	+	.	ID=comp134993_c0_seq1.mrna1;geneID=comp134993_c0_seq1.path1;Name=comp134993_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=493;mismatches=2;indels=0;unknowns=0;Target=comp134993_c0_seq1 495 1 .;CDS_Target=comp134993_c0_seq1 196 110 .;locus=RLOC_00005235
Chr1	stalkie_big_nohaplotig	exon	3651157	3651651	99	+	.	Parent=comp134993_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	3651266	3651352	.	+	0	Parent=comp134993_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3652829	3653939	.	-	.	ID=comp156028_c0_seq1.mrna1;geneID=comp156028_c0_seq1.path1;Name=comp156028_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1105;mismatches=2;indels=9;unknowns=0;Target=comp156028_c0_seq1 1112 1 .;CDS_Target=comp156028_c0_seq1 496 338 .;locus=RLOC_00005235
Chr1	stalkie_big_nohaplotig	exon	3652829	3653939	99	-	.	Parent=comp156028_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	3653444	3653602	.	-	0	Parent=comp156028_c0_seq1.mrna1
Chr1	gffcl	locus	3660285	3661256	.	-	.	ID=RLOC_00005236;geneIDs=FBgn0036264.1.path1;transcripts=FBgn0036264.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3660285	3661256	.	-	.	ID=FBgn0036264.1.mrna1;geneID=FBgn0036264.1.path1;Name=FBgn0036264.1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=962;mismatches=10;indels=0;unknowns=0;Target=FBgn0036264.1 972 1 .;locus=RLOC_00005236
Chr1	stalkie_big_nohaplotig	exon	3660285	3661256	98	-	.	Parent=FBgn0036264.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	3660285	3661256	.	-	0	Parent=FBgn0036264.1.mrna1
Chr1	gffcl	locus	3705265	3705650	.	-	.	ID=RLOC_00005237;geneIDs=comp147345_c0_seq1.path1;transcripts=comp147345_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3705265	3705650	.	-	.	ID=comp147345_c0_seq1.mrna1;geneID=comp147345_c0_seq1.path1;Name=comp147345_c0_seq1;Dir=indeterminatecoverage=93.0;identity=99.2;matches=383;mismatches=2;indels=1;unknowns=0;Target=comp147345_c0_seq1 414 30 .;CDS_Target=comp147345_c0_seq1 220 158 .;locus=RLOC_00005237
Chr1	stalkie_big_nohaplotig	exon	3705265	3705650	99	-	.	Parent=comp147345_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	3705460	3705522	.	-	0	Parent=comp147345_c0_seq1.mrna1
Chr1	gffcl	locus	3735532	3735728	.	+	.	ID=RLOC_00005238;geneIDs=comp172062_c0_seq1.path1;transcripts=comp172062_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3735532	3735728	.	+	.	ID=comp172062_c0_seq1.mrna1;geneID=comp172062_c0_seq1.path1;Name=comp172062_c0_seq1;Dir=indeterminatecoverage=87.9;identity=100.0;matches=197;mismatches=0;indels=0;unknowns=0;Target=comp172062_c0_seq1 224 28 .;CDS_Target=comp172062_c0_seq1 78 28 .;locus=RLOC_00005238
Chr1	stalkie_big_nohaplotig	exon	3735532	3735728	100	+	.	Parent=comp172062_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	3735532	3735582	.	+	0	Parent=comp172062_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3758604	3760224	.	+	.	ID=comp147850_c0_seq1.mrna1;geneID=comp147850_c0_seq1.path1;Name=comp147850_c0_seq1;Dir=sensecoverage=99.9;identity=99.5;matches=1100;mismatches=4;indels=1;unknowns=0;Target=comp147850_c0_seq1 622 978 +;locus=RLOC_00005239
Chr1	stalkie_big_nohaplotig	exon	3758604	3759185	99	+	.	Parent=comp147850_c0_seq1.mrna1;Target=comp147850_c0_seq1 1 581 +
Chr1	stalkie_big_nohaplotig	exon	3759702	3760224	99	+	.	Parent=comp147850_c0_seq1.mrna1;Target=comp147850_c0_seq1 582 1104 +
Chr1	stalkie_big_nohaplotig	CDS	3759742	3760098	.	+	0	Parent=comp147850_c0_seq1.mrna1
Chr1	gffcl	locus	3780272	3780677	.	+	.	ID=RLOC_00005240;geneIDs=comp142173_c1_seq1.path1;transcripts=comp142173_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3780272	3780677	.	+	.	ID=comp142173_c1_seq1.mrna1;geneID=comp142173_c1_seq1.path1;Name=comp142173_c1_seq1;Dir=indeterminatecoverage=97.1;identity=99.8;matches=405;mismatches=1;indels=0;unknowns=0;Target=comp142173_c1_seq1 418 13 .;CDS_Target=comp142173_c1_seq1 417 316 .;locus=RLOC_00005240
Chr1	stalkie_big_nohaplotig	exon	3780272	3780677	99	+	.	Parent=comp142173_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	3780575	3780676	.	+	0	Parent=comp142173_c1_seq1.mrna1
Chr1	gffcl	locus	3781271	3782657	.	.	.	ID=RLOC_00005241;geneIDs=comp158878_c1_seq1.path1,comp158878_c1_seq1.path2;transcripts=comp158878_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3781271	3782657	.	+	.	ID=comp158878_c1_seq1.mrna1;geneID=comp158878_c1_seq1.path1;Name=comp158878_c1_seq1;Dir=indeterminatecoverage=55.9;identity=97.3;matches=1384;mismatches=3;indels=36;unknowns=0;Target=comp158878_c1_seq1 1423 1 .;CDS_Target=comp158878_c1_seq1 1423 1263 .;locus=RLOC_00005241
Chr1	stalkie_big_nohaplotig	exon	3781271	3782657	97	+	.	Parent=comp158878_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	3782497	3782657	.	+	0	Parent=comp158878_c1_seq1.mrna1
Chr1	gffcl	locus	3784291	3785253	.	+	.	ID=RLOC_00005242;geneIDs=comp159457_c0_seq1.path1;transcripts=comp159457_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3784291	3785253	.	+	.	ID=comp159457_c0_seq1.mrna1;geneID=comp159457_c0_seq1.path1;Name=comp159457_c0_seq1;Dir=indeterminatecoverage=99.6;identity=97.2;matches=946;mismatches=17;indels=10;unknowns=0;Target=comp159457_c0_seq1 973 1 .;CDS_Target=comp159457_c0_seq1 546 415 .;locus=RLOC_00005242
Chr1	stalkie_big_nohaplotig	exon	3784291	3785253	97	+	.	Parent=comp159457_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	3784698	3784829	.	+	0	Parent=comp159457_c0_seq1.mrna1
Chr1	gffcl	locus	3785326	3785937	.	-	.	ID=RLOC_00005243;geneIDs=comp146866_c0_seq1.path1;transcripts=comp146866_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3785326	3785937	.	-	.	ID=comp146866_c0_seq1.mrna1;geneID=comp146866_c0_seq1.path1;Name=comp146866_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=611;mismatches=1;indels=0;unknowns=0;Target=comp146866_c0_seq1 612 1 .;CDS_Target=comp146866_c0_seq1 322 248 .;locus=RLOC_00005243
Chr1	stalkie_big_nohaplotig	exon	3785326	3785937	99	-	.	Parent=comp146866_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	3785616	3785690	.	-	0	Parent=comp146866_c0_seq1.mrna1
Chr1	gffcl	locus	3827923	3828608	.	+	.	ID=RLOC_00005245;geneIDs=comp103199_c0_seq1.path1;transcripts=comp103199_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3827923	3828608	.	+	.	ID=comp103199_c0_seq1.mrna1;geneID=comp103199_c0_seq1.path1;Name=comp103199_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=550;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005245
Chr1	stalkie_big_nohaplotig	exon	3827923	3828026	100	+	.	Parent=comp103199_c0_seq1.mrna1;Target=comp103199_c0_seq1 447 550 -
Chr1	stalkie_big_nohaplotig	exon	3828163	3828608	100	+	.	Parent=comp103199_c0_seq1.mrna1;Target=comp103199_c0_seq1 1 446 -
Chr1	stalkie_big_nohaplotig	CDS	3827923	3828026	.	+	0	Parent=comp103199_c0_seq1.mrna1;Target=comp103199_c0_seq1 447 550 .
Chr1	stalkie_big_nohaplotig	CDS	3828163	3828226	.	+	1	Parent=comp103199_c0_seq1.mrna1;Target=comp103199_c0_seq1 383 446 .
Chr1	gffcl	locus	3836482	3837111	.	+	.	ID=RLOC_00005246;geneIDs=comp150634_c0_seq1.path1;transcripts=comp150634_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3836482	3837111	.	+	.	ID=comp150634_c0_seq1.mrna1;geneID=comp150634_c0_seq1.path1;Name=comp150634_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=627;mismatches=3;indels=2;unknowns=0;Target=comp150634_c0_seq1 632 1 .;CDS_Target=comp150634_c0_seq1 525 403 .;locus=RLOC_00005246
Chr1	stalkie_big_nohaplotig	exon	3836482	3837111	99	+	.	Parent=comp150634_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	3836883	3837004	.	+	0	Parent=comp150634_c0_seq1.mrna1
Chr1	gffcl	locus	3974401	3978045	.	-	.	ID=RLOC_00005247;geneIDs=comp146134_c0_seq1.path1;transcripts=comp146134_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3974401	3978045	.	-	.	ID=comp146134_c0_seq1.mrna1;geneID=comp146134_c0_seq1.path1;Name=comp146134_c0_seq1;Dir=sensecoverage=97.5;identity=98.6;matches=844;mismatches=8;indels=4;unknowns=0;Target=comp146134_c0_seq1 25 141 +;locus=RLOC_00005247
Chr1	stalkie_big_nohaplotig	exon	3974401	3974501	100	-	.	Parent=comp146134_c0_seq1.mrna1;Target=comp146134_c0_seq1 777 877 +
Chr1	stalkie_big_nohaplotig	exon	3977294	3978045	98	-	.	Parent=comp146134_c0_seq1.mrna1;Target=comp146134_c0_seq1 23 776 +
Chr1	stalkie_big_nohaplotig	CDS	3977926	3978043	.	-	0	Parent=comp146134_c0_seq1.mrna1
Chr1	gffcl	locus	3981613	3983724	.	-	.	ID=RLOC_00005248;geneIDs=FBgn0027554.1.path1;transcripts=FBgn0027554.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3981613	3983724	.	-	.	ID=FBgn0027554.1.mrna1;geneID=FBgn0027554.1.path1;Name=FBgn0027554.1;Dir=sensecoverage=100.0;identity=100.0;matches=1797;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005248
Chr1	stalkie_big_nohaplotig	exon	3981613	3981853	100	-	.	Parent=FBgn0027554.1.mrna1;Target=FBgn0027554.1 1557 1797 +
Chr1	stalkie_big_nohaplotig	exon	3981917	3982527	100	-	.	Parent=FBgn0027554.1.mrna1;Target=FBgn0027554.1 946 1556 +
Chr1	stalkie_big_nohaplotig	exon	3982609	3983324	100	-	.	Parent=FBgn0027554.1.mrna1;Target=FBgn0027554.1 230 945 +
Chr1	stalkie_big_nohaplotig	exon	3983400	3983534	100	-	.	Parent=FBgn0027554.1.mrna1;Target=FBgn0027554.1 95 229 +
Chr1	stalkie_big_nohaplotig	exon	3983631	3983724	100	-	.	Parent=FBgn0027554.1.mrna1;Target=FBgn0027554.1 1 94 +
Chr1	stalkie_big_nohaplotig	CDS	3981613	3981853	.	-	1	Parent=FBgn0027554.1.mrna1;Target=FBgn0027554.1 1557 1797 +
Chr1	stalkie_big_nohaplotig	CDS	3981917	3982527	.	-	0	Parent=FBgn0027554.1.mrna1;Target=FBgn0027554.1 946 1556 +
Chr1	stalkie_big_nohaplotig	CDS	3982609	3983324	.	-	2	Parent=FBgn0027554.1.mrna1;Target=FBgn0027554.1 230 945 +
Chr1	stalkie_big_nohaplotig	CDS	3983400	3983534	.	-	2	Parent=FBgn0027554.1.mrna1;Target=FBgn0027554.1 95 229 +
Chr1	stalkie_big_nohaplotig	CDS	3983631	3983724	.	-	0	Parent=FBgn0027554.1.mrna1;Target=FBgn0027554.1 1 94 +
Chr1	gffcl	locus	3990126	3991235	.	+	.	ID=RLOC_00005249;geneIDs=FBgn0035830.1.path1;transcripts=FBgn0035830.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	3990126	3991235	.	+	.	ID=FBgn0035830.1.mrna1;geneID=FBgn0035830.1.path1;Name=FBgn0035830.1;Dir=sensecoverage=100.0;identity=99.9;matches=968;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005249
Chr1	stalkie_big_nohaplotig	exon	3990126	3990205	100	+	.	Parent=FBgn0035830.1.mrna1;Target=FBgn0035830.1 1 80 +
Chr1	stalkie_big_nohaplotig	exon	3990287	3990856	100	+	.	Parent=FBgn0035830.1.mrna1;Target=FBgn0035830.1 81 650 +
Chr1	stalkie_big_nohaplotig	exon	3990917	3991235	99	+	.	Parent=FBgn0035830.1.mrna1;Target=FBgn0035830.1 651 969 +
Chr1	stalkie_big_nohaplotig	CDS	3990126	3990205	.	+	0	Parent=FBgn0035830.1.mrna1;Target=FBgn0035830.1 1 80 +
Chr1	stalkie_big_nohaplotig	CDS	3990287	3990856	.	+	1	Parent=FBgn0035830.1.mrna1;Target=FBgn0035830.1 81 650 +
Chr1	stalkie_big_nohaplotig	CDS	3990917	3991235	.	+	1	Parent=FBgn0035830.1.mrna1;Target=FBgn0035830.1 651 969 +
Chr1	gffcl	locus	4026259	4033792	.	-	.	ID=RLOC_00005251;geneIDs=comp155003_c0_seq1.path1;transcripts=comp155003_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4026259	4033792	.	-	.	ID=comp155003_c0_seq1.mrna1;geneID=comp155003_c0_seq1.path1;Name=comp155003_c0_seq1;Dir=antisensecoverage=99.8;identity=97.8;matches=944;mismatches=16;indels=5;unknowns=0;Target=comp155003_c0_seq1 244 468 .;locus=RLOC_00005251
Chr1	stalkie_big_nohaplotig	exon	4026259	4026361	98	-	.	Parent=comp155003_c0_seq1.mrna1;Target=comp155003_c0_seq1 2 104 -
Chr1	stalkie_big_nohaplotig	exon	4026423	4026798	99	-	.	Parent=comp155003_c0_seq1.mrna1;Target=comp155003_c0_seq1 105 481 -
Chr1	stalkie_big_nohaplotig	exon	4027470	4027579	92	-	.	Parent=comp155003_c0_seq1.mrna1;Target=comp155003_c0_seq1 482 594 -
Chr1	stalkie_big_nohaplotig	exon	4032151	4032222	93	-	.	Parent=comp155003_c0_seq1.mrna1;Target=comp155003_c0_seq1 595 667 -
Chr1	stalkie_big_nohaplotig	exon	4032308	4032522	97	-	.	Parent=comp155003_c0_seq1.mrna1;Target=comp155003_c0_seq1 668 882 -
Chr1	stalkie_big_nohaplotig	exon	4033709	4033792	100	-	.	Parent=comp155003_c0_seq1.mrna1;Target=comp155003_c0_seq1 883 966 -
Chr1	stalkie_big_nohaplotig	CDS	4026561	4026785	.	-	0	Parent=comp155003_c0_seq1.mrna1
Chr1	gffcl	locus	4042446	4043189	.	-	.	ID=RLOC_00005252;geneIDs=FBgn0027066.3.path1;transcripts=FBgn0027066.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4042446	4043189	.	-	.	ID=FBgn0027066.3.mrna1;geneID=FBgn0027066.3.path1;Name=FBgn0027066.3;Dir=indeterminatecoverage=100.0;identity=100.0;matches=744;mismatches=0;indels=0;unknowns=0;Target=FBgn0027066.3 744 1 .;locus=RLOC_00005252
Chr1	stalkie_big_nohaplotig	exon	4042446	4043189	100	-	.	Parent=FBgn0027066.3.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4042446	4043189	.	-	0	Parent=FBgn0027066.3.mrna1
Chr1	gffcl	locus	4066975	4073236	.	-	.	ID=RLOC_00005253;geneIDs=FBgn0041156.1.path1;transcripts=FBgn0041156.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4066975	4073236	.	-	.	ID=FBgn0041156.1.mrna1;geneID=FBgn0041156.1.path1;Name=FBgn0041156.1;Dir=sensecoverage=100.0;identity=99.9;matches=1403;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005253
Chr1	stalkie_big_nohaplotig	exon	4066975	4067346	100	-	.	Parent=FBgn0041156.1.mrna1;Target=FBgn0041156.1 1033 1404 +
Chr1	stalkie_big_nohaplotig	exon	4067476	4067716	99	-	.	Parent=FBgn0041156.1.mrna1;Target=FBgn0041156.1 792 1032 +
Chr1	stalkie_big_nohaplotig	exon	4072446	4073236	100	-	.	Parent=FBgn0041156.1.mrna1;Target=FBgn0041156.1 1 791 +
Chr1	stalkie_big_nohaplotig	CDS	4066975	4067346	.	-	0	Parent=FBgn0041156.1.mrna1;Target=FBgn0041156.1 1033 1404 +
Chr1	stalkie_big_nohaplotig	CDS	4067476	4067716	.	-	1	Parent=FBgn0041156.1.mrna1;Target=FBgn0041156.1 792 1032 +
Chr1	stalkie_big_nohaplotig	CDS	4072446	4073236	.	-	0	Parent=FBgn0041156.1.mrna1;Target=FBgn0041156.1 1 791 +
Chr1	gffcl	locus	4113390	4114208	.	+	.	ID=RLOC_00005254;geneIDs=FBgn0035827.1.path1;transcripts=FBgn0035827.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4113390	4114208	.	+	.	ID=FBgn0035827.1.mrna1;geneID=FBgn0035827.1.path1;Name=FBgn0035827.1;Dir=sensecoverage=100.0;identity=100.0;matches=240;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005254
Chr1	stalkie_big_nohaplotig	exon	4113390	4113539	100	+	.	Parent=FBgn0035827.1.mrna1;Target=FBgn0035827.1 1 150 +
Chr1	stalkie_big_nohaplotig	exon	4114119	4114208	100	+	.	Parent=FBgn0035827.1.mrna1;Target=FBgn0035827.1 151 240 +
Chr1	stalkie_big_nohaplotig	CDS	4113390	4113539	.	+	0	Parent=FBgn0035827.1.mrna1;Target=FBgn0035827.1 1 150 +
Chr1	stalkie_big_nohaplotig	CDS	4114119	4114208	.	+	0	Parent=FBgn0035827.1.mrna1;Target=FBgn0035827.1 151 240 +
Chr1	gffcl	locus	4116524	4142505	.	+	.	ID=RLOC_00005255;geneIDs=FBgn0024187.1.path1;transcripts=FBgn0024187.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4116524	4142505	.	+	.	ID=FBgn0024187.1.mrna1;geneID=FBgn0024187.1.path1;Name=FBgn0024187.1;Dir=sensecoverage=100.0;identity=99.8;matches=3744;mismatches=6;indels=3;unknowns=0;locus=RLOC_00005255
Chr1	stalkie_big_nohaplotig	exon	4116524	4116564	100	+	.	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 1 41 +
Chr1	stalkie_big_nohaplotig	exon	4116653	4116782	93	+	.	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 42 174 +
Chr1	stalkie_big_nohaplotig	exon	4124834	4124854	100	+	.	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 175 195 +
Chr1	stalkie_big_nohaplotig	exon	4129781	4130017	100	+	.	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 196 432 +
Chr1	stalkie_big_nohaplotig	exon	4130075	4130230	100	+	.	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 433 588 +
Chr1	stalkie_big_nohaplotig	exon	4131264	4131421	100	+	.	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 589 746 +
Chr1	stalkie_big_nohaplotig	exon	4131648	4131880	100	+	.	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 747 979 +
Chr1	stalkie_big_nohaplotig	exon	4132223	4132327	100	+	.	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 980 1084 +
Chr1	stalkie_big_nohaplotig	exon	4133816	4133851	100	+	.	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 1085 1120 +
Chr1	stalkie_big_nohaplotig	exon	4134202	4134219	100	+	.	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 1121 1138 +
Chr1	stalkie_big_nohaplotig	exon	4136287	4136344	100	+	.	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 1139 1196 +
Chr1	stalkie_big_nohaplotig	exon	4136418	4136596	100	+	.	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 1197 1375 +
Chr1	stalkie_big_nohaplotig	exon	4136661	4136886	99	+	.	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 1376 1601 +
Chr1	stalkie_big_nohaplotig	exon	4136954	4137714	100	+	.	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 1602 2362 +
Chr1	stalkie_big_nohaplotig	exon	4137777	4138653	100	+	.	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 2363 3239 +
Chr1	stalkie_big_nohaplotig	exon	4138725	4138942	100	+	.	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 3240 3457 +
Chr1	stalkie_big_nohaplotig	exon	4139000	4139194	100	+	.	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 3458 3652 +
Chr1	stalkie_big_nohaplotig	exon	4142405	4142505	100	+	.	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 3653 3753 +
Chr1	stalkie_big_nohaplotig	CDS	4116524	4116564	.	+	0	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 1 41 +
Chr1	stalkie_big_nohaplotig	CDS	4116653	4116782	.	+	1	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 42 174 +
Chr1	stalkie_big_nohaplotig	CDS	4124834	4124854	.	+	0	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 175 195 +
Chr1	stalkie_big_nohaplotig	CDS	4129781	4130017	.	+	0	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 196 432 +
Chr1	stalkie_big_nohaplotig	CDS	4130075	4130230	.	+	0	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 433 588 +
Chr1	stalkie_big_nohaplotig	CDS	4131264	4131421	.	+	0	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 589 746 +
Chr1	stalkie_big_nohaplotig	CDS	4131648	4131880	.	+	1	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 747 979 +
Chr1	stalkie_big_nohaplotig	CDS	4132223	4132327	.	+	2	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 980 1084 +
Chr1	stalkie_big_nohaplotig	CDS	4133816	4133851	.	+	2	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 1085 1120 +
Chr1	stalkie_big_nohaplotig	CDS	4134202	4134219	.	+	2	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 1121 1138 +
Chr1	stalkie_big_nohaplotig	CDS	4136287	4136344	.	+	2	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 1139 1196 +
Chr1	stalkie_big_nohaplotig	CDS	4136418	4136596	.	+	1	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 1197 1375 +
Chr1	stalkie_big_nohaplotig	CDS	4136661	4136886	.	+	2	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 1376 1601 +
Chr1	stalkie_big_nohaplotig	CDS	4136954	4137714	.	+	1	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 1602 2362 +
Chr1	stalkie_big_nohaplotig	CDS	4137777	4138653	.	+	2	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 2363 3239 +
Chr1	stalkie_big_nohaplotig	CDS	4138725	4138942	.	+	1	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 3240 3457 +
Chr1	stalkie_big_nohaplotig	CDS	4139000	4139194	.	+	2	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 3458 3652 +
Chr1	stalkie_big_nohaplotig	CDS	4142405	4142505	.	+	2	Parent=FBgn0024187.1.mrna1;Target=FBgn0024187.1 3653 3753 +
Chr1	gffcl	locus	4135530	4136052	.	-	.	ID=RLOC_00005256;geneIDs=comp144471_c1_seq1.path1;transcripts=comp144471_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4135530	4136052	.	-	.	ID=comp144471_c1_seq1.mrna1;geneID=comp144471_c1_seq1.path1;Name=comp144471_c1_seq1;Dir=indeterminatecoverage=100.0;identity=87.5;matches=490;mismatches=33;indels=37;unknowns=0;Target=comp144471_c1_seq1 560 1 .;CDS_Target=comp144471_c1_seq1 402 307 .;locus=RLOC_00005256
Chr1	stalkie_big_nohaplotig	exon	4135530	4136052	87	-	.	Parent=comp144471_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4135658	4135753	.	-	0	Parent=comp144471_c1_seq1.mrna1
Chr1	gffcl	locus	4144574	4145047	.	-	.	ID=RLOC_00005257;geneIDs=comp153887_c0_seq1.path1;transcripts=comp153887_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4144574	4145047	.	-	.	ID=comp153887_c0_seq1.mrna1;geneID=comp153887_c0_seq1.path1;Name=comp153887_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=468;mismatches=6;indels=0;unknowns=0;Target=comp153887_c0_seq1 474 1 .;CDS_Target=comp153887_c0_seq1 91 2 .;locus=RLOC_00005257
Chr1	stalkie_big_nohaplotig	exon	4144574	4145047	98	-	.	Parent=comp153887_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4144957	4145046	.	-	0	Parent=comp153887_c0_seq1.mrna1
Chr1	gffcl	locus	4149932	4151340	.	+	.	ID=RLOC_00005259;geneIDs=FBgn0035825.1.path1;transcripts=FBgn0035825.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4149932	4151340	.	+	.	ID=FBgn0035825.1.mrna1;geneID=FBgn0035825.1.path1;Name=FBgn0035825.1;Dir=sensecoverage=100.0;identity=100.0;matches=1131;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005259
Chr1	stalkie_big_nohaplotig	exon	4149932	4150036	100	+	.	Parent=FBgn0035825.1.mrna1;Target=FBgn0035825.1 1 105 +
Chr1	stalkie_big_nohaplotig	exon	4150099	4150322	100	+	.	Parent=FBgn0035825.1.mrna1;Target=FBgn0035825.1 106 329 +
Chr1	stalkie_big_nohaplotig	exon	4150389	4150761	100	+	.	Parent=FBgn0035825.1.mrna1;Target=FBgn0035825.1 330 702 +
Chr1	stalkie_big_nohaplotig	exon	4150841	4151060	100	+	.	Parent=FBgn0035825.1.mrna1;Target=FBgn0035825.1 703 922 +
Chr1	stalkie_big_nohaplotig	exon	4151132	4151340	100	+	.	Parent=FBgn0035825.1.mrna1;Target=FBgn0035825.1 923 1131 +
Chr1	stalkie_big_nohaplotig	CDS	4149932	4150036	.	+	0	Parent=FBgn0035825.1.mrna1;Target=FBgn0035825.1 1 105 +
Chr1	stalkie_big_nohaplotig	CDS	4150099	4150322	.	+	0	Parent=FBgn0035825.1.mrna1;Target=FBgn0035825.1 106 329 +
Chr1	stalkie_big_nohaplotig	CDS	4150389	4150761	.	+	1	Parent=FBgn0035825.1.mrna1;Target=FBgn0035825.1 330 702 +
Chr1	stalkie_big_nohaplotig	CDS	4150841	4151060	.	+	0	Parent=FBgn0035825.1.mrna1;Target=FBgn0035825.1 703 922 +
Chr1	stalkie_big_nohaplotig	CDS	4151132	4151340	.	+	2	Parent=FBgn0035825.1.mrna1;Target=FBgn0035825.1 923 1131 +
Chr1	gffcl	locus	4152427	4153567	.	-	.	ID=RLOC_00005260;geneIDs=FBgn0035824.1.path1;transcripts=FBgn0035824.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4152427	4153567	.	-	.	ID=FBgn0035824.1.mrna1;geneID=FBgn0035824.1.path1;Name=FBgn0035824.1;Dir=sensecoverage=100.0;identity=100.0;matches=1077;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005260
Chr1	stalkie_big_nohaplotig	exon	4152427	4153200	100	-	.	Parent=FBgn0035824.1.mrna1;Target=FBgn0035824.1 304 1077 +
Chr1	stalkie_big_nohaplotig	exon	4153265	4153567	100	-	.	Parent=FBgn0035824.1.mrna1;Target=FBgn0035824.1 1 303 +
Chr1	stalkie_big_nohaplotig	CDS	4152427	4153200	.	-	0	Parent=FBgn0035824.1.mrna1;Target=FBgn0035824.1 304 1077 +
Chr1	stalkie_big_nohaplotig	CDS	4153265	4153567	.	-	0	Parent=FBgn0035824.1.mrna1;Target=FBgn0035824.1 1 303 +
Chr1	gffcl	locus	4172331	4191514	.	+	.	ID=RLOC_00005261;geneIDs=FBgn0003041.1.path1;transcripts=FBgn0003041.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4172331	4191514	.	+	.	ID=FBgn0003041.1.mrna1;geneID=FBgn0003041.1.path1;Name=FBgn0003041.1;Dir=sensecoverage=96.8;identity=100.0;matches=2557;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005261
Chr1	stalkie_big_nohaplotig	exon	4172331	4172553	99	+	.	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 86 308 +
Chr1	stalkie_big_nohaplotig	exon	4180881	4181025	100	+	.	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 309 453 +
Chr1	stalkie_big_nohaplotig	exon	4181111	4181220	100	+	.	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 454 563 +
Chr1	stalkie_big_nohaplotig	exon	4182024	4182273	100	+	.	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 564 813 +
Chr1	stalkie_big_nohaplotig	exon	4187668	4187799	100	+	.	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 814 945 +
Chr1	stalkie_big_nohaplotig	exon	4187875	4188231	100	+	.	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 946 1302 +
Chr1	stalkie_big_nohaplotig	exon	4188299	4188695	100	+	.	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 1303 1699 +
Chr1	stalkie_big_nohaplotig	exon	4188761	4188921	100	+	.	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 1700 1860 +
Chr1	stalkie_big_nohaplotig	exon	4189283	4189669	100	+	.	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 1861 2247 +
Chr1	stalkie_big_nohaplotig	exon	4189732	4189842	100	+	.	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 2248 2358 +
Chr1	stalkie_big_nohaplotig	exon	4191165	4191317	100	+	.	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 2359 2511 +
Chr1	stalkie_big_nohaplotig	exon	4191383	4191514	100	+	.	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 2512 2643 +
Chr1	stalkie_big_nohaplotig	CDS	4172333	4172553	.	+	0	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 88 308 +
Chr1	stalkie_big_nohaplotig	CDS	4180881	4181025	.	+	1	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 309 453 +
Chr1	stalkie_big_nohaplotig	CDS	4181111	4181220	.	+	0	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 454 563 +
Chr1	stalkie_big_nohaplotig	CDS	4182024	4182273	.	+	1	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 564 813 +
Chr1	stalkie_big_nohaplotig	CDS	4187668	4187799	.	+	0	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 814 945 +
Chr1	stalkie_big_nohaplotig	CDS	4187875	4188231	.	+	0	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 946 1302 +
Chr1	stalkie_big_nohaplotig	CDS	4188299	4188695	.	+	0	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 1303 1699 +
Chr1	stalkie_big_nohaplotig	CDS	4188761	4188921	.	+	2	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 1700 1860 +
Chr1	stalkie_big_nohaplotig	CDS	4189283	4189669	.	+	0	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 1861 2247 +
Chr1	stalkie_big_nohaplotig	CDS	4189732	4189842	.	+	0	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 2248 2358 +
Chr1	stalkie_big_nohaplotig	CDS	4191165	4191317	.	+	0	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 2359 2511 +
Chr1	stalkie_big_nohaplotig	CDS	4191383	4191514	.	+	0	Parent=FBgn0003041.1.mrna1;Target=FBgn0003041.1 2512 2643 +
Chr1	gffcl	locus	4194789	4265736	.	-	.	ID=RLOC_00005262;geneIDs=FBgn0052365.1.path1;transcripts=FBgn0052365.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4194789	4265736	.	-	.	ID=FBgn0052365.1.mrna1;geneID=FBgn0052365.1.path1;Name=FBgn0052365.1;Dir=sensecoverage=99.5;identity=99.8;matches=1611;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005262
Chr1	stalkie_big_nohaplotig	exon	4194789	4195734	99	-	.	Parent=FBgn0052365.1.mrna1;Target=FBgn0052365.1 678 1623 +
Chr1	stalkie_big_nohaplotig	exon	4195819	4196195	99	-	.	Parent=FBgn0052365.1.mrna1;Target=FBgn0052365.1 301 677 +
Chr1	stalkie_big_nohaplotig	exon	4208757	4208969	99	-	.	Parent=FBgn0052365.1.mrna1;Target=FBgn0052365.1 88 300 +
Chr1	stalkie_big_nohaplotig	exon	4265658	4265736	100	-	.	Parent=FBgn0052365.1.mrna1;Target=FBgn0052365.1 9 87 +
Chr1	stalkie_big_nohaplotig	CDS	4194789	4195734	.	-	1	Parent=FBgn0052365.1.mrna1;Target=FBgn0052365.1 678 1623 +
Chr1	stalkie_big_nohaplotig	CDS	4195819	4196195	.	-	0	Parent=FBgn0052365.1.mrna1;Target=FBgn0052365.1 301 677 +
Chr1	stalkie_big_nohaplotig	CDS	4208757	4208969	.	-	0	Parent=FBgn0052365.1.mrna1;Target=FBgn0052365.1 88 300 +
Chr1	stalkie_big_nohaplotig	CDS	4265658	4265735	.	-	0	Parent=FBgn0052365.1.mrna1;Target=FBgn0052365.1 10 87 +
Chr1	gffcl	locus	4244439	5093318	.	.	.	ID=RLOC_00005263;geneIDs=comp139384_c0_seq1.path1,comp144735_c2_seq1.path1,comp154445_c0_seq1.path1,comp157855_c0_seq1.path1,comp158767_c1_seq1.path1,comp159882_c2_seq1.path1;transcripts=comp159882_c2_seq1.mrna1,comp157855_c0_seq1.mrna1,comp158767_c1_seq1.mrna1,comp154445_c0_seq1.mrna1,comp144735_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4244439	5092838	.	-	.	ID=comp159882_c2_seq1.mrna1;geneID=comp159882_c2_seq1.path1;Name=comp159882_c2_seq1;Dir=sensecoverage=95.2;identity=97.7;matches=5011;mismatches=49;indels=70;unknowns=0;locus=RLOC_00005263
Chr1	stalkie_big_nohaplotig	exon	4244439	4244449	100	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5328 5338 +
Chr1	stalkie_big_nohaplotig	exon	4255732	4255734	66	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5325 5327 +
Chr1	stalkie_big_nohaplotig	exon	4266367	4266384	100	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5307 5324 +
Chr1	stalkie_big_nohaplotig	exon	4367379	4367380	100	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5305 5306 +
Chr1	stalkie_big_nohaplotig	exon	4373437	4373438	100	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5303 5304 +
Chr1	stalkie_big_nohaplotig	exon	4379705	4379706	100	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5301 5302 +
Chr1	stalkie_big_nohaplotig	exon	4387216	4387219	100	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5297 5300 +
Chr1	stalkie_big_nohaplotig	exon	4390779	4390780	100	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5295 5296 +
Chr1	stalkie_big_nohaplotig	exon	4393319	4393323	100	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5290 5294 +
Chr1	stalkie_big_nohaplotig	exon	4393357	4393364	100	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5228 5235 +
Chr1	stalkie_big_nohaplotig	exon	4401308	4401310	100	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5225 5227 +
Chr1	stalkie_big_nohaplotig	exon	4415604	4415609	100	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5219 5224 +
Chr1	stalkie_big_nohaplotig	exon	4419085	4419104	48	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5192 5218 +
Chr1	stalkie_big_nohaplotig	exon	4469126	4469136	100	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5118 5128 +
Chr1	stalkie_big_nohaplotig	exon	4479795	4479802	100	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5110 5117 +
Chr1	stalkie_big_nohaplotig	exon	4482349	4482354	100	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5104 5109 +
Chr1	stalkie_big_nohaplotig	exon	4486945	4486950	100	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5098 5103 +
Chr1	stalkie_big_nohaplotig	exon	4490989	4490996	100	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5090 5097 +
Chr1	stalkie_big_nohaplotig	exon	4494805	4494857	52	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5023 5089 +
Chr1	stalkie_big_nohaplotig	exon	4502002	4502010	100	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5014 5022 +
Chr1	stalkie_big_nohaplotig	exon	4516988	4517021	46	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 4967 5013 +
Chr1	stalkie_big_nohaplotig	exon	4524789	4524797	100	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 4958 4966 +
Chr1	stalkie_big_nohaplotig	exon	4527029	4527048	30	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 4906 4957 +
Chr1	stalkie_big_nohaplotig	exon	4554240	4554259	100	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 4823 4842 +
Chr1	stalkie_big_nohaplotig	exon	5071767	5075352	99	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 1237 4822 +
Chr1	stalkie_big_nohaplotig	exon	5075413	5075466	100	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 1183 1236 +
Chr1	stalkie_big_nohaplotig	exon	5091687	5092838	99	-	.	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 31 1182 +
Chr1	stalkie_big_nohaplotig	CDS	4244440	4244449	.	-	1	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5328 5337 +
Chr1	stalkie_big_nohaplotig	CDS	4255732	4255734	.	-	1	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5325 5327 +
Chr1	stalkie_big_nohaplotig	CDS	4266367	4266384	.	-	1	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5307 5324 +
Chr1	stalkie_big_nohaplotig	CDS	4367379	4367380	.	-	0	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5305 5306 +
Chr1	stalkie_big_nohaplotig	CDS	4373437	4373438	.	-	2	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5303 5304 +
Chr1	stalkie_big_nohaplotig	CDS	4379705	4379706	.	-	1	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5301 5302 +
Chr1	stalkie_big_nohaplotig	CDS	4387216	4387219	.	-	2	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5297 5300 +
Chr1	stalkie_big_nohaplotig	CDS	4390779	4390780	.	-	1	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5295 5296 +
Chr1	stalkie_big_nohaplotig	CDS	4393319	4393323	.	-	0	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5290 5294 +
Chr1	stalkie_big_nohaplotig	CDS	4393357	4393364	.	-	2	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5228 5235 +
Chr1	stalkie_big_nohaplotig	CDS	4401308	4401310	.	-	2	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5225 5227 +
Chr1	stalkie_big_nohaplotig	CDS	4415604	4415609	.	-	2	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5219 5224 +
Chr1	stalkie_big_nohaplotig	CDS	4419085	4419104	.	-	1	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5192 5218 +
Chr1	stalkie_big_nohaplotig	CDS	4469126	4469136	.	-	0	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5118 5128 +
Chr1	stalkie_big_nohaplotig	CDS	4479795	4479802	.	-	2	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5110 5117 +
Chr1	stalkie_big_nohaplotig	CDS	4482349	4482354	.	-	2	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5104 5109 +
Chr1	stalkie_big_nohaplotig	CDS	4486945	4486950	.	-	2	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5098 5103 +
Chr1	stalkie_big_nohaplotig	CDS	4490989	4490996	.	-	1	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5090 5097 +
Chr1	stalkie_big_nohaplotig	CDS	4494805	4494857	.	-	0	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5023 5089 +
Chr1	stalkie_big_nohaplotig	CDS	4502002	4502010	.	-	0	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 5014 5022 +
Chr1	stalkie_big_nohaplotig	CDS	4516988	4517021	.	-	1	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 4967 5013 +
Chr1	stalkie_big_nohaplotig	CDS	4524789	4524797	.	-	1	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 4958 4966 +
Chr1	stalkie_big_nohaplotig	CDS	4527029	4527048	.	-	0	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 4906 4957 +
Chr1	stalkie_big_nohaplotig	CDS	4554240	4554259	.	-	2	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 4823 4842 +
Chr1	stalkie_big_nohaplotig	CDS	5071767	5075352	.	-	0	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 1237 4822 +
Chr1	stalkie_big_nohaplotig	CDS	5075413	5075466	.	-	0	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 1183 1236 +
Chr1	stalkie_big_nohaplotig	CDS	5091687	5091710	.	-	0	Parent=comp159882_c2_seq1.mrna1;Target=comp159882_c2_seq1 1159 1182 +
Chr1	stalkie_big_nohaplotig	mRNA	4415159	4417115	.	-	.	ID=comp157855_c0_seq1.mrna1;geneID=comp157855_c0_seq1.path1;Name=comp157855_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1957;mismatches=0;indels=17;unknowns=0;Target=comp157855_c0_seq1 1974 1 .;CDS_Target=comp157855_c0_seq1 227 75 .;locus=RLOC_00005263
Chr1	stalkie_big_nohaplotig	exon	4415159	4417115	99	-	.	Parent=comp157855_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4416889	4417041	.	-	0	Parent=comp157855_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4468862	4469184	.	-	.	ID=comp158767_c1_seq1.mrna1;geneID=comp158767_c1_seq1.path1;Name=comp158767_c1_seq1;Dir=indeterminatecoverage=98.8;identity=99.1;matches=320;mismatches=3;indels=0;unknowns=0;Target=comp158767_c1_seq1 323 1 .;CDS_Target=comp158767_c1_seq1 158 108 .;locus=RLOC_00005263
Chr1	stalkie_big_nohaplotig	exon	4468862	4469184	99	-	.	Parent=comp158767_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4469027	4469077	.	-	0	Parent=comp158767_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4471702	4487320	.	-	.	ID=comp154445_c0_seq1.mrna1;geneID=comp154445_c0_seq1.path1;Name=comp154445_c0_seq1;Dir=antisensecoverage=100.0;identity=98.5;matches=994;mismatches=15;indels=0;unknowns=0;Target=comp154445_c0_seq1 782 877 .;locus=RLOC_00005263
Chr1	stalkie_big_nohaplotig	exon	4471702	4471823	97	-	.	Parent=comp154445_c0_seq1.mrna1;Target=comp154445_c0_seq1 1 122 -
Chr1	stalkie_big_nohaplotig	exon	4486434	4487320	98	-	.	Parent=comp154445_c0_seq1.mrna1;Target=comp154445_c0_seq1 123 1009 -
Chr1	stalkie_big_nohaplotig	CDS	4487093	4487188	.	-	0	Parent=comp154445_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4490783	4506098	.	-	.	ID=comp144735_c2_seq1.mrna1;geneID=comp144735_c2_seq1.path1;Name=comp144735_c2_seq1;Dir=indeterminatecoverage=97.3;identity=88.3;matches=664;mismatches=32;indels=56;unknowns=0;Target=comp144735_c2_seq1 775 671 .;locus=RLOC_00005263
Chr1	stalkie_big_nohaplotig	exon	4490783	4491271	100	-	.	Parent=comp144735_c2_seq1.mrna1;Target=comp144735_c2_seq1 966 478 .
Chr1	stalkie_big_nohaplotig	exon	4493598	4493602	80	-	.	Parent=comp144735_c2_seq1.mrna1;Target=comp144735_c2_seq1 477 473 .
Chr1	stalkie_big_nohaplotig	exon	4493753	4493764	100	-	.	Parent=comp144735_c2_seq1.mrna1;Target=comp144735_c2_seq1 460 449 .
Chr1	stalkie_big_nohaplotig	exon	4496186	4496207	77	-	.	Parent=comp144735_c2_seq1.mrna1;Target=comp144735_c2_seq1 440 424 .
Chr1	stalkie_big_nohaplotig	exon	4496835	4496845	100	-	.	Parent=comp144735_c2_seq1.mrna1;Target=comp144735_c2_seq1 337 327 .
Chr1	stalkie_big_nohaplotig	exon	4499786	4499794	21	-	.	Parent=comp144735_c2_seq1.mrna1;Target=comp144735_c2_seq1 326 285 .
Chr1	stalkie_big_nohaplotig	exon	4500907	4500917	100	-	.	Parent=comp144735_c2_seq1.mrna1;Target=comp144735_c2_seq1 284 274 .
Chr1	stalkie_big_nohaplotig	exon	4501790	4501852	60	-	.	Parent=comp144735_c2_seq1.mrna1;Target=comp144735_c2_seq1 273 208 .
Chr1	stalkie_big_nohaplotig	exon	4504104	4504148	61	-	.	Parent=comp144735_c2_seq1.mrna1;Target=comp144735_c2_seq1 143 84 .
Chr1	stalkie_big_nohaplotig	exon	4505519	4505529	100	-	.	Parent=comp144735_c2_seq1.mrna1;Target=comp144735_c2_seq1 46 36 .
Chr1	stalkie_big_nohaplotig	exon	4506027	4506031	100	-	.	Parent=comp144735_c2_seq1.mrna1;Target=comp144735_c2_seq1 35 31 .
Chr1	stalkie_big_nohaplotig	exon	4506083	4506098	100	-	.	Parent=comp144735_c2_seq1.mrna1;Target=comp144735_c2_seq1 30 15 .
Chr1	stalkie_big_nohaplotig	CDS	4490974	4491078	.	-	0	Parent=comp144735_c2_seq1.mrna1
Chr1	gffcl	locus	4295975	4296667	.	+	.	ID=RLOC_00005264;geneIDs=FBgn0053129.1.path1;transcripts=FBgn0053129.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4295975	4296667	.	+	.	ID=FBgn0053129.1.mrna1;geneID=FBgn0053129.1.path1;Name=FBgn0053129.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=688;mismatches=5;indels=0;unknowns=0;Target=FBgn0053129.1 693 1 .;locus=RLOC_00005264
Chr1	stalkie_big_nohaplotig	exon	4295975	4296667	99	+	.	Parent=FBgn0053129.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4295975	4296667	.	+	0	Parent=FBgn0053129.1.mrna1
Chr1	gffcl	locus	4301934	4303296	.	+	.	ID=RLOC_00005265;geneIDs=comp159781_c0_seq1.path1;transcripts=comp159781_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4301934	4303296	.	+	.	ID=comp159781_c0_seq1.mrna1;geneID=comp159781_c0_seq1.path1;Name=comp159781_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.3;matches=1355;mismatches=6;indels=3;unknowns=0;Target=comp159781_c0_seq1 1375 14 .;CDS_Target=comp159781_c0_seq1 999 919 .;locus=RLOC_00005265
Chr1	stalkie_big_nohaplotig	exon	4301934	4303296	99	+	.	Parent=comp159781_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4302838	4302918	.	+	0	Parent=comp159781_c0_seq1.mrna1
Chr1	gffcl	locus	4304048	4304690	.	+	.	ID=RLOC_00005266;geneIDs=comp141496_c0_seq1.path1;transcripts=comp141496_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4304048	4304690	.	+	.	ID=comp141496_c0_seq1.mrna1;geneID=comp141496_c0_seq1.path1;Name=comp141496_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=633;mismatches=3;indels=8;unknowns=0;Target=comp141496_c0_seq1 637 1 .;CDS_Target=comp141496_c0_seq1 130 2 .;locus=RLOC_00005266
Chr1	stalkie_big_nohaplotig	exon	4304048	4304690	98	+	.	Parent=comp141496_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4304049	4304176	.	+	0	Parent=comp141496_c0_seq1.mrna1
Chr1	gffcl	locus	4305651	4460978	.	+	.	ID=RLOC_00005267;geneIDs=FBgn0016694.1.path1,comp153560_c0_seq1.path1;transcripts=FBgn0016694.1.mrna1,comp153560_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4305651	4460365	.	+	.	ID=FBgn0016694.1.mrna1;geneID=FBgn0016694.1.path1;Name=FBgn0016694.1;Dir=sensecoverage=100.0;identity=100.0;matches=876;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005267
Chr1	stalkie_big_nohaplotig	exon	4305651	4305780	100	+	.	Parent=FBgn0016694.1.mrna1;Target=FBgn0016694.1 1 130 +
Chr1	stalkie_big_nohaplotig	exon	4441732	4441773	100	+	.	Parent=FBgn0016694.1.mrna1;Target=FBgn0016694.1 131 172 +
Chr1	stalkie_big_nohaplotig	exon	4449535	4449686	100	+	.	Parent=FBgn0016694.1.mrna1;Target=FBgn0016694.1 173 324 +
Chr1	stalkie_big_nohaplotig	exon	4452250	4452475	100	+	.	Parent=FBgn0016694.1.mrna1;Target=FBgn0016694.1 325 550 +
Chr1	stalkie_big_nohaplotig	exon	4459903	4460144	100	+	.	Parent=FBgn0016694.1.mrna1;Target=FBgn0016694.1 551 792 +
Chr1	stalkie_big_nohaplotig	exon	4460282	4460365	100	+	.	Parent=FBgn0016694.1.mrna1;Target=FBgn0016694.1 793 876 +
Chr1	stalkie_big_nohaplotig	CDS	4305651	4305780	.	+	0	Parent=FBgn0016694.1.mrna1;Target=FBgn0016694.1 1 130 +
Chr1	stalkie_big_nohaplotig	CDS	4441732	4441773	.	+	2	Parent=FBgn0016694.1.mrna1;Target=FBgn0016694.1 131 172 +
Chr1	stalkie_big_nohaplotig	CDS	4449535	4449686	.	+	2	Parent=FBgn0016694.1.mrna1;Target=FBgn0016694.1 173 324 +
Chr1	stalkie_big_nohaplotig	CDS	4452250	4452475	.	+	0	Parent=FBgn0016694.1.mrna1;Target=FBgn0016694.1 325 550 +
Chr1	stalkie_big_nohaplotig	CDS	4459903	4460144	.	+	2	Parent=FBgn0016694.1.mrna1;Target=FBgn0016694.1 551 792 +
Chr1	stalkie_big_nohaplotig	CDS	4460282	4460365	.	+	0	Parent=FBgn0016694.1.mrna1;Target=FBgn0016694.1 793 876 +
Chr1	stalkie_big_nohaplotig	mRNA	4398549	4460978	.	+	.	ID=comp153560_c0_seq1.mrna1;geneID=comp153560_c0_seq1.path1;Name=comp153560_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=1844;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005267
Chr1	stalkie_big_nohaplotig	exon	4398549	4399033	100	+	.	Parent=comp153560_c0_seq1.mrna1;Target=comp153560_c0_seq1 1 485 +
Chr1	stalkie_big_nohaplotig	exon	4441732	4441773	100	+	.	Parent=comp153560_c0_seq1.mrna1;Target=comp153560_c0_seq1 486 527 +
Chr1	stalkie_big_nohaplotig	exon	4449535	4449686	100	+	.	Parent=comp153560_c0_seq1.mrna1;Target=comp153560_c0_seq1 528 679 +
Chr1	stalkie_big_nohaplotig	exon	4452250	4452475	100	+	.	Parent=comp153560_c0_seq1.mrna1;Target=comp153560_c0_seq1 680 905 +
Chr1	stalkie_big_nohaplotig	exon	4459903	4460144	100	+	.	Parent=comp153560_c0_seq1.mrna1;Target=comp153560_c0_seq1 906 1147 +
Chr1	stalkie_big_nohaplotig	exon	4460282	4460978	100	+	.	Parent=comp153560_c0_seq1.mrna1;Target=comp153560_c0_seq1 1148 1844 +
Chr1	stalkie_big_nohaplotig	CDS	4398550	4399033	.	+	0	Parent=comp153560_c0_seq1.mrna1;Target=comp153560_c0_seq1 2 485 +
Chr1	stalkie_big_nohaplotig	CDS	4441732	4441773	.	+	2	Parent=comp153560_c0_seq1.mrna1;Target=comp153560_c0_seq1 486 527 +
Chr1	stalkie_big_nohaplotig	CDS	4449535	4449686	.	+	2	Parent=comp153560_c0_seq1.mrna1;Target=comp153560_c0_seq1 528 679 +
Chr1	stalkie_big_nohaplotig	CDS	4452250	4452475	.	+	0	Parent=comp153560_c0_seq1.mrna1;Target=comp153560_c0_seq1 680 905 +
Chr1	stalkie_big_nohaplotig	CDS	4459903	4460144	.	+	2	Parent=comp153560_c0_seq1.mrna1;Target=comp153560_c0_seq1 906 1147 +
Chr1	stalkie_big_nohaplotig	CDS	4460282	4460368	.	+	0	Parent=comp153560_c0_seq1.mrna1;Target=comp153560_c0_seq1 1148 1234 +
Chr1	gffcl	locus	4351099	4351672	.	-	.	ID=RLOC_00005268;geneIDs=comp17511_c0_seq1.path1;transcripts=comp17511_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4351099	4351672	.	-	.	ID=comp17511_c0_seq1.mrna1;geneID=comp17511_c0_seq1.path1;Name=comp17511_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=574;mismatches=0;indels=0;unknowns=0;Target=comp17511_c0_seq1 574 1 .;CDS_Target=comp17511_c0_seq1 346 227 .;locus=RLOC_00005268
Chr1	stalkie_big_nohaplotig	exon	4351099	4351672	100	-	.	Parent=comp17511_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4351327	4351446	.	-	0	Parent=comp17511_c0_seq1.mrna1
Chr1	gffcl	locus	4379971	4380919	.	-	.	ID=RLOC_00005269;geneIDs=comp151582_c0_seq1.path1;transcripts=comp151582_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4379971	4380919	.	-	.	ID=comp151582_c0_seq1.mrna1;geneID=comp151582_c0_seq1.path1;Name=comp151582_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=944;mismatches=5;indels=1;unknowns=0;Target=comp151582_c0_seq1 950 1 .;CDS_Target=comp151582_c0_seq1 158 3 .;locus=RLOC_00005269
Chr1	stalkie_big_nohaplotig	exon	4379971	4380919	99	-	.	Parent=comp151582_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4380762	4380917	.	-	0	Parent=comp151582_c0_seq1.mrna1
Chr1	gffcl	locus	4397346	4398294	.	-	.	ID=RLOC_00005270;geneIDs=comp151582_c0_seq1.path2;transcripts=comp151582_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	4397346	4398294	.	-	.	ID=comp151582_c0_seq1.mrna2;geneID=comp151582_c0_seq1.path2;Name=comp151582_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=944;mismatches=5;indels=1;unknowns=0;Target=comp151582_c0_seq1 950 1 .;CDS_Target=comp151582_c0_seq1 158 3 .;locus=RLOC_00005270
Chr1	stalkie_big_nohaplotig	exon	4397346	4398294	99	-	.	Parent=comp151582_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	4398137	4398292	.	-	0	Parent=comp151582_c0_seq1.mrna2
Chr1	gffcl	locus	4414207	4414735	.	+	.	ID=RLOC_00005271;geneIDs=comp144804_c0_seq1.path1;transcripts=comp144804_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4414207	4414735	.	+	.	ID=comp144804_c0_seq1.mrna1;geneID=comp144804_c0_seq1.path1;Name=comp144804_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.3;matches=526;mismatches=3;indels=17;unknowns=0;Target=comp144804_c0_seq1 546 1 .;CDS_Target=comp144804_c0_seq1 87 1 .;locus=RLOC_00005271
Chr1	stalkie_big_nohaplotig	exon	4414207	4414735	96	+	.	Parent=comp144804_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4414207	4414293	.	+	0	Parent=comp144804_c0_seq1.mrna1
Chr1	gffcl	locus	4420574	4421197	.	+	.	ID=RLOC_00005272;geneIDs=comp91438_c0_seq1.path1;transcripts=comp91438_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4420574	4421197	.	+	.	ID=comp91438_c0_seq1.mrna1;geneID=comp91438_c0_seq1.path1;Name=comp91438_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.0;matches=610;mismatches=8;indels=11;unknowns=0;Target=comp91438_c0_seq1 623 1 .;CDS_Target=comp91438_c0_seq1 197 96 .;locus=RLOC_00005272
Chr1	stalkie_big_nohaplotig	exon	4420574	4421197	96	+	.	Parent=comp91438_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4420675	4420776	.	+	0	Parent=comp91438_c0_seq1.mrna1
Chr1	gffcl	locus	4421390	4421671	.	+	.	ID=RLOC_00005273;geneIDs=comp116777_c0_seq1.path1;transcripts=comp116777_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4421390	4421671	.	+	.	ID=comp116777_c0_seq1.mrna1;geneID=comp116777_c0_seq1.path1;Name=comp116777_c0_seq1;Dir=indeterminatecoverage=86.2;identity=100.0;matches=282;mismatches=0;indels=0;unknowns=0;Target=comp116777_c0_seq1 327 46 .;CDS_Target=comp116777_c0_seq1 213 130 .;locus=RLOC_00005273
Chr1	stalkie_big_nohaplotig	exon	4421390	4421671	100	+	.	Parent=comp116777_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4421474	4421557	.	+	0	Parent=comp116777_c0_seq1.mrna1
Chr1	gffcl	locus	4421878	4422753	.	-	.	ID=RLOC_00005274;geneIDs=comp155065_c4_seq1.path1;transcripts=comp155065_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4421878	4422753	.	-	.	ID=comp155065_c4_seq1.mrna1;geneID=comp155065_c4_seq1.path1;Name=comp155065_c4_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=874;mismatches=0;indels=2;unknowns=0;Target=comp155065_c4_seq1 874 1 .;CDS_Target=comp155065_c4_seq1 450 244 .;locus=RLOC_00005274
Chr1	stalkie_big_nohaplotig	exon	4421878	4422753	99	-	.	Parent=comp155065_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4422304	4422510	.	-	0	Parent=comp155065_c4_seq1.mrna1
Chr1	gffcl	locus	4461196	4462536	.	+	.	ID=RLOC_00005275;geneIDs=comp157028_c0_seq1.path1;transcripts=comp157028_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4461196	4462536	.	+	.	ID=comp157028_c0_seq1.mrna1;geneID=comp157028_c0_seq1.path1;Name=comp157028_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.3;matches=1335;mismatches=6;indels=3;unknowns=0;Target=comp157028_c0_seq1 1344 1 .;CDS_Target=comp157028_c0_seq1 572 459 .;locus=RLOC_00005275
Chr1	stalkie_big_nohaplotig	exon	4461196	4462536	99	+	.	Parent=comp157028_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4461654	4461767	.	+	0	Parent=comp157028_c0_seq1.mrna1
Chr1	gffcl	locus	4465770	4467860	.	-	.	ID=RLOC_00005276;geneIDs=comp161088_c2_seq1.path1;transcripts=comp161088_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4465770	4467860	.	-	.	ID=comp161088_c2_seq1.mrna1;geneID=comp161088_c2_seq1.path1;Name=comp161088_c2_seq1;Dir=indeterminatecoverage=99.5;identity=97.7;matches=2045;mismatches=46;indels=2;unknowns=0;Target=comp161088_c2_seq1 2093 1 .;CDS_Target=comp161088_c2_seq1 1649 1515 .;locus=RLOC_00005276
Chr1	stalkie_big_nohaplotig	exon	4465770	4467860	97	-	.	Parent=comp161088_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4466214	4466348	.	-	0	Parent=comp161088_c2_seq1.mrna1
Chr1	gffcl	locus	4467935	4468307	.	+	.	ID=RLOC_00005277;geneIDs=comp120906_c0_seq1.path1;transcripts=comp120906_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4467935	4468307	.	+	.	ID=comp120906_c0_seq1.mrna1;geneID=comp120906_c0_seq1.path1;Name=comp120906_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=373;mismatches=0;indels=0;unknowns=0;Target=comp120906_c0_seq1 373 1 .;CDS_Target=comp120906_c0_seq1 349 242 .;locus=RLOC_00005277
Chr1	stalkie_big_nohaplotig	exon	4467935	4468307	100	+	.	Parent=comp120906_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4468176	4468283	.	+	0	Parent=comp120906_c0_seq1.mrna1
Chr1	gffcl	locus	4482590	4482962	.	+	.	ID=RLOC_00005278;geneIDs=comp120906_c0_seq1.path2;transcripts=comp120906_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	4482590	4482962	.	+	.	ID=comp120906_c0_seq1.mrna2;geneID=comp120906_c0_seq1.path2;Name=comp120906_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=373;mismatches=0;indels=0;unknowns=0;Target=comp120906_c0_seq1 373 1 .;CDS_Target=comp120906_c0_seq1 349 242 .;locus=RLOC_00005278
Chr1	stalkie_big_nohaplotig	exon	4482590	4482962	100	+	.	Parent=comp120906_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	4482831	4482938	.	+	0	Parent=comp120906_c0_seq1.mrna2
Chr1	gffcl	locus	4483517	4483839	.	-	.	ID=RLOC_00005279;geneIDs=comp158767_c1_seq1.path2;transcripts=comp158767_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	4483517	4483839	.	-	.	ID=comp158767_c1_seq1.mrna2;geneID=comp158767_c1_seq1.path2;Name=comp158767_c1_seq1;Dir=indeterminatecoverage=98.8;identity=99.1;matches=320;mismatches=3;indels=0;unknowns=0;Target=comp158767_c1_seq1 323 1 .;CDS_Target=comp158767_c1_seq1 158 108 .;locus=RLOC_00005279
Chr1	stalkie_big_nohaplotig	exon	4483517	4483839	99	-	.	Parent=comp158767_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	4483682	4483732	.	-	0	Parent=comp158767_c1_seq1.mrna2
Chr1	gffcl	locus	4484692	4484871	.	-	.	ID=RLOC_00005280;geneIDs=comp134760_c1_seq1.path1;transcripts=comp134760_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4484692	4484871	.	-	.	ID=comp134760_c1_seq1.mrna1;geneID=comp134760_c1_seq1.path1;Name=comp134760_c1_seq1;Dir=indeterminatecoverage=35.8;identity=100.0;matches=180;mismatches=0;indels=0;unknowns=0;Target=comp134760_c1_seq1 184 5 .;CDS_Target=comp134760_c1_seq1 53 6 .;locus=RLOC_00005280
Chr1	stalkie_big_nohaplotig	exon	4484692	4484871	100	-	.	Parent=comp134760_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4484823	4484870	.	-	0	Parent=comp134760_c1_seq1.mrna1
Chr1	gffcl	locus	4485366	4485569	.	-	.	ID=RLOC_00005281;geneIDs=comp46952_c0_seq1.path1;transcripts=comp46952_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4485366	4485569	.	-	.	ID=comp46952_c0_seq1.mrna1;geneID=comp46952_c0_seq1.path1;Name=comp46952_c0_seq1;Dir=indeterminatecoverage=93.2;identity=100.0;matches=204;mismatches=0;indels=0;unknowns=0;Target=comp46952_c0_seq1 205 2 .;CDS_Target=comp46952_c0_seq1 56 3 .;locus=RLOC_00005281
Chr1	stalkie_big_nohaplotig	exon	4485366	4485569	100	-	.	Parent=comp46952_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4485515	4485568	.	-	0	Parent=comp46952_c0_seq1.mrna1
Chr1	gffcl	locus	4523928	4525356	.	-	.	ID=RLOC_00005283;geneIDs=comp149486_c0_seq1.path1;transcripts=comp149486_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4523928	4525356	.	-	.	ID=comp149486_c0_seq1.mrna1;geneID=comp149486_c0_seq1.path1;Name=comp149486_c0_seq1;Dir=sensecoverage=100.0;identity=93.8;matches=549;mismatches=24;indels=12;unknowns=0;Target=comp149486_c0_seq1 412 522 +;locus=RLOC_00005283
Chr1	stalkie_big_nohaplotig	exon	4523928	4524368	93	-	.	Parent=comp149486_c0_seq1.mrna1;Target=comp149486_c0_seq1 144 574 +
Chr1	stalkie_big_nohaplotig	exon	4525214	4525356	95	-	.	Parent=comp149486_c0_seq1.mrna1;Target=comp149486_c0_seq1 1 143 +
Chr1	stalkie_big_nohaplotig	CDS	4523980	4524090	.	-	0	Parent=comp149486_c0_seq1.mrna1
Chr1	gffcl	locus	4605582	4606040	.	+	.	ID=RLOC_00005284;geneIDs=comp145867_c0_seq1.path1;transcripts=comp145867_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4605582	4606040	.	+	.	ID=comp145867_c0_seq1.mrna1;geneID=comp145867_c0_seq1.path1;Name=comp145867_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=450;mismatches=2;indels=8;unknowns=0;Target=comp145867_c0_seq1 453 1 .;CDS_Target=comp145867_c0_seq1 119 3 .;locus=RLOC_00005284
Chr1	stalkie_big_nohaplotig	exon	4605582	4606040	97	+	.	Parent=comp145867_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4605584	4605699	.	+	0	Parent=comp145867_c0_seq1.mrna1
Chr1	gffcl	locus	4630262	4641040	.	+	.	ID=RLOC_00005285;geneIDs=FBgn0023076.path1;transcripts=FBgn0023076.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4630262	4641040	.	+	.	ID=FBgn0023076.mrna1;geneID=FBgn0023076.path1;Name=FBgn0023076;Dir=sensecoverage=99.9;identity=99.9;matches=1231;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005285
Chr1	stalkie_big_nohaplotig	exon	4630262	4630362	100	+	.	Parent=FBgn0023076.mrna1;Target=FBgn0023076 1 101 +
Chr1	stalkie_big_nohaplotig	exon	4639510	4639658	100	+	.	Parent=FBgn0023076.mrna1;Target=FBgn0023076 102 250 +
Chr1	stalkie_big_nohaplotig	exon	4639723	4639904	100	+	.	Parent=FBgn0023076.mrna1;Target=FBgn0023076 251 432 +
Chr1	stalkie_big_nohaplotig	exon	4640112	4640328	100	+	.	Parent=FBgn0023076.mrna1;Target=FBgn0023076 433 649 +
Chr1	stalkie_big_nohaplotig	exon	4640391	4640723	100	+	.	Parent=FBgn0023076.mrna1;Target=FBgn0023076 650 982 +
Chr1	stalkie_big_nohaplotig	exon	4640791	4641040	99	+	.	Parent=FBgn0023076.mrna1;Target=FBgn0023076 983 1232 +
Chr1	stalkie_big_nohaplotig	CDS	4630262	4630362	.	+	0	Parent=FBgn0023076.mrna1;Target=FBgn0023076 1 101 +
Chr1	stalkie_big_nohaplotig	CDS	4639510	4639658	.	+	1	Parent=FBgn0023076.mrna1;Target=FBgn0023076 102 250 +
Chr1	stalkie_big_nohaplotig	CDS	4639723	4639904	.	+	2	Parent=FBgn0023076.mrna1;Target=FBgn0023076 251 432 +
Chr1	stalkie_big_nohaplotig	CDS	4640112	4640328	.	+	0	Parent=FBgn0023076.mrna1;Target=FBgn0023076 433 649 +
Chr1	stalkie_big_nohaplotig	CDS	4640391	4640723	.	+	2	Parent=FBgn0023076.mrna1;Target=FBgn0023076 650 982 +
Chr1	stalkie_big_nohaplotig	CDS	4640791	4641038	.	+	2	Parent=FBgn0023076.mrna1;Target=FBgn0023076 983 1230 +
Chr1	gffcl	locus	4632492	4797894	.	.	.	ID=RLOC_00005286;geneIDs=FBgn0001208.1.path1,comp146460_c0_seq1.path1,comp152211_c0_seq1.path1;transcripts=comp152211_c0_seq1.mrna1,FBgn0001208.1.mrna1,comp146460_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4632492	4797894	.	-	.	ID=comp152211_c0_seq1.mrna1;geneID=comp152211_c0_seq1.path1;Name=comp152211_c0_seq1;Dir=indeterminatecoverage=89.4;identity=64.6;matches=535;mismatches=84;indels=209;unknowns=0;Target=comp152211_c0_seq1 161 78 .;locus=RLOC_00005286
Chr1	stalkie_big_nohaplotig	exon	4632492	4632537	60	-	.	Parent=comp152211_c0_seq1.mrna1;Target=comp152211_c0_seq1 887 827 .
Chr1	stalkie_big_nohaplotig	exon	4636359	4636365	100	-	.	Parent=comp152211_c0_seq1.mrna1;Target=comp152211_c0_seq1 826 820 .
Chr1	stalkie_big_nohaplotig	exon	4637321	4637327	100	-	.	Parent=comp152211_c0_seq1.mrna1;Target=comp152211_c0_seq1 819 813 .
Chr1	stalkie_big_nohaplotig	exon	4640757	4640763	100	-	.	Parent=comp152211_c0_seq1.mrna1;Target=comp152211_c0_seq1 812 806 .
Chr1	stalkie_big_nohaplotig	exon	4642607	4642610	100	-	.	Parent=comp152211_c0_seq1.mrna1;Target=comp152211_c0_seq1 805 802 .
Chr1	stalkie_big_nohaplotig	exon	4648443	4648508	50	-	.	Parent=comp152211_c0_seq1.mrna1;Target=comp152211_c0_seq1 801 744 .
Chr1	stalkie_big_nohaplotig	exon	4651584	4651604	61	-	.	Parent=comp152211_c0_seq1.mrna1;Target=comp152211_c0_seq1 724 712 .
Chr1	stalkie_big_nohaplotig	exon	4657544	4657550	100	-	.	Parent=comp152211_c0_seq1.mrna1;Target=comp152211_c0_seq1 711 705 .
Chr1	stalkie_big_nohaplotig	exon	4666809	4666814	100	-	.	Parent=comp152211_c0_seq1.mrna1;Target=comp152211_c0_seq1 607 602 .
Chr1	stalkie_big_nohaplotig	exon	4670907	4670935	38	-	.	Parent=comp152211_c0_seq1.mrna1;Target=comp152211_c0_seq1 601 540 .
Chr1	stalkie_big_nohaplotig	exon	4678936	4678958	53	-	.	Parent=comp152211_c0_seq1.mrna1;Target=comp152211_c0_seq1 539 512 .
Chr1	stalkie_big_nohaplotig	exon	4684563	4684564	100	-	.	Parent=comp152211_c0_seq1.mrna1;Target=comp152211_c0_seq1 511 510 .
Chr1	stalkie_big_nohaplotig	exon	4692525	4692584	12	-	.	Parent=comp152211_c0_seq1.mrna1;Target=comp152211_c0_seq1 509 471 .
Chr1	stalkie_big_nohaplotig	exon	4754585	4754594	100	-	.	Parent=comp152211_c0_seq1.mrna1;Target=comp152211_c0_seq1 468 459 .
Chr1	stalkie_big_nohaplotig	exon	4755580	4755583	100	-	.	Parent=comp152211_c0_seq1.mrna1;Target=comp152211_c0_seq1 458 455 .
Chr1	stalkie_big_nohaplotig	exon	4762963	4762969	100	-	.	Parent=comp152211_c0_seq1.mrna1;Target=comp152211_c0_seq1 454 448 .
Chr1	stalkie_big_nohaplotig	exon	4765260	4765262	100	-	.	Parent=comp152211_c0_seq1.mrna1;Target=comp152211_c0_seq1 447 445 .
Chr1	stalkie_big_nohaplotig	exon	4771183	4771185	100	-	.	Parent=comp152211_c0_seq1.mrna1;Target=comp152211_c0_seq1 444 442 .
Chr1	stalkie_big_nohaplotig	exon	4774592	4774620	41	-	.	Parent=comp152211_c0_seq1.mrna1;Target=comp152211_c0_seq1 424 364 .
Chr1	stalkie_big_nohaplotig	exon	4783206	4783213	75	-	.	Parent=comp152211_c0_seq1.mrna1;Target=comp152211_c0_seq1 363 356 .
Chr1	stalkie_big_nohaplotig	exon	4784147	4784160	78	-	.	Parent=comp152211_c0_seq1.mrna1;Target=comp152211_c0_seq1 355 345 .
Chr1	stalkie_big_nohaplotig	exon	4797565	4797894	82	-	.	Parent=comp152211_c0_seq1.mrna1;Target=comp152211_c0_seq1 344 1 .
Chr1	stalkie_big_nohaplotig	CDS	4797751	4797817	.	-	0	Parent=comp152211_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4647200	4652336	.	-	.	ID=FBgn0001208.1.mrna1;geneID=FBgn0001208.1.path1;Name=FBgn0001208.1;Dir=sensecoverage=100.0;identity=100.0;matches=1365;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005286
Chr1	stalkie_big_nohaplotig	exon	4647200	4647359	100	-	.	Parent=FBgn0001208.1.mrna1;Target=FBgn0001208.1 1206 1365 +
Chr1	stalkie_big_nohaplotig	exon	4647623	4647852	100	-	.	Parent=FBgn0001208.1.mrna1;Target=FBgn0001208.1 976 1205 +
Chr1	stalkie_big_nohaplotig	exon	4647967	4648229	100	-	.	Parent=FBgn0001208.1.mrna1;Target=FBgn0001208.1 713 975 +
Chr1	stalkie_big_nohaplotig	exon	4648492	4648724	100	-	.	Parent=FBgn0001208.1.mrna1;Target=FBgn0001208.1 480 712 +
Chr1	stalkie_big_nohaplotig	exon	4648795	4649228	100	-	.	Parent=FBgn0001208.1.mrna1;Target=FBgn0001208.1 46 479 +
Chr1	stalkie_big_nohaplotig	exon	4652292	4652336	100	-	.	Parent=FBgn0001208.1.mrna1;Target=FBgn0001208.1 1 45 +
Chr1	stalkie_big_nohaplotig	CDS	4647200	4647359	.	-	1	Parent=FBgn0001208.1.mrna1;Target=FBgn0001208.1 1206 1365 +
Chr1	stalkie_big_nohaplotig	CDS	4647623	4647852	.	-	0	Parent=FBgn0001208.1.mrna1;Target=FBgn0001208.1 976 1205 +
Chr1	stalkie_big_nohaplotig	CDS	4647967	4648229	.	-	2	Parent=FBgn0001208.1.mrna1;Target=FBgn0001208.1 713 975 +
Chr1	stalkie_big_nohaplotig	CDS	4648492	4648724	.	-	1	Parent=FBgn0001208.1.mrna1;Target=FBgn0001208.1 480 712 +
Chr1	stalkie_big_nohaplotig	CDS	4648795	4649228	.	-	0	Parent=FBgn0001208.1.mrna1;Target=FBgn0001208.1 46 479 +
Chr1	stalkie_big_nohaplotig	CDS	4652292	4652336	.	-	0	Parent=FBgn0001208.1.mrna1;Target=FBgn0001208.1 1 45 +
Chr1	stalkie_big_nohaplotig	mRNA	4651404	4651952	.	+	.	ID=comp146460_c0_seq1.mrna1;geneID=comp146460_c0_seq1.path1;Name=comp146460_c0_seq1;Dir=indeterminatecoverage=97.3;identity=100.0;matches=549;mismatches=0;indels=0;unknowns=0;Target=comp146460_c0_seq1 564 16 .;CDS_Target=comp146460_c0_seq1 166 17 .;locus=RLOC_00005286
Chr1	stalkie_big_nohaplotig	exon	4651404	4651952	100	+	.	Parent=comp146460_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4651405	4651554	.	+	0	Parent=comp146460_c0_seq1.mrna1
Chr1	gffcl	locus	4650196	4650848	.	+	.	ID=RLOC_00005287;geneIDs=comp148399_c0_seq1.path1;transcripts=comp148399_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4650196	4650848	.	+	.	ID=comp148399_c0_seq1.mrna1;geneID=comp148399_c0_seq1.path1;Name=comp148399_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=653;mismatches=0;indels=0;unknowns=0;Target=comp148399_c0_seq1 653 1 .;CDS_Target=comp148399_c0_seq1 559 386 .;locus=RLOC_00005287
Chr1	stalkie_big_nohaplotig	exon	4650196	4650848	100	+	.	Parent=comp148399_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4650581	4650754	.	+	0	Parent=comp148399_c0_seq1.mrna1
Chr1	gffcl	locus	4661337	4664744	.	-	.	ID=RLOC_00005288;geneIDs=FBgn0035798.1.path1;transcripts=FBgn0035798.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4661337	4664744	.	-	.	ID=FBgn0035798.1.mrna1;geneID=FBgn0035798.1.path1;Name=FBgn0035798.1;Dir=sensecoverage=100.0;identity=99.7;matches=3141;mismatches=7;indels=2;unknowns=0;Target=FBgn0035798.1 3 176 +;locus=RLOC_00005288
Chr1	stalkie_big_nohaplotig	exon	4661337	4661380	100	-	.	Parent=FBgn0035798.1.mrna1;Target=FBgn0035798.1 3107 3150 +
Chr1	stalkie_big_nohaplotig	exon	4661498	4662225	99	-	.	Parent=FBgn0035798.1.mrna1;Target=FBgn0035798.1 2378 3106 +
Chr1	stalkie_big_nohaplotig	exon	4662369	4664744	99	-	.	Parent=FBgn0035798.1.mrna1;Target=FBgn0035798.1 1 2377 +
Chr1	stalkie_big_nohaplotig	CDS	4664570	4664742	.	-	0	Parent=FBgn0035798.1.mrna1
Chr1	gffcl	locus	4678259	4678741	.	-	.	ID=RLOC_00005289;geneIDs=FBgn0035817.1.path1;transcripts=FBgn0035817.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4678259	4678741	.	-	.	ID=FBgn0035817.1.mrna1;geneID=FBgn0035817.1.path1;Name=FBgn0035817.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=483;mismatches=0;indels=0;unknowns=0;Target=FBgn0035817.1 483 1 .;locus=RLOC_00005289
Chr1	stalkie_big_nohaplotig	exon	4678259	4678741	100	-	.	Parent=FBgn0035817.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4678259	4678741	.	-	0	Parent=FBgn0035817.1.mrna1
Chr1	gffcl	locus	4686816	4689368	.	-	.	ID=RLOC_00005290;geneIDs=comp161369_c0_seq1.path1;transcripts=comp161369_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4686816	4689368	.	-	.	ID=comp161369_c0_seq1.mrna1;geneID=comp161369_c0_seq1.path1;Name=comp161369_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.4;matches=2539;mismatches=14;indels=2;unknowns=0;Target=comp161369_c0_seq1 2555 1 .;CDS_Target=comp161369_c0_seq1 1469 1335 .;locus=RLOC_00005290
Chr1	stalkie_big_nohaplotig	exon	4686816	4689368	99	-	.	Parent=comp161369_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4687902	4688036	.	-	0	Parent=comp161369_c0_seq1.mrna1
Chr1	gffcl	locus	4689826	4690639	.	-	.	ID=RLOC_00005291;geneIDs=comp152376_c0_seq1.path1;transcripts=comp152376_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4689826	4690639	.	-	.	ID=comp152376_c0_seq1.mrna1;geneID=comp152376_c0_seq1.path1;Name=comp152376_c0_seq1;Dir=indeterminatecoverage=98.5;identity=99.8;matches=812;mismatches=2;indels=0;unknowns=0;Target=comp152376_c0_seq1 826 13 .;CDS_Target=comp152376_c0_seq1 709 602 .;locus=RLOC_00005291
Chr1	stalkie_big_nohaplotig	exon	4689826	4690639	99	-	.	Parent=comp152376_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4689943	4690050	.	-	0	Parent=comp152376_c0_seq1.mrna1
Chr1	gffcl	locus	4690655	4691293	.	-	.	ID=RLOC_00005292;geneIDs=comp117131_c0_seq1.path1;transcripts=comp117131_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4690655	4691293	.	-	.	ID=comp117131_c0_seq1.mrna1;geneID=comp117131_c0_seq1.path1;Name=comp117131_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=638;mismatches=0;indels=1;unknowns=0;Target=comp117131_c0_seq1 638 1 .;CDS_Target=comp117131_c0_seq1 637 440 .;locus=RLOC_00005292
Chr1	stalkie_big_nohaplotig	exon	4690655	4691293	99	-	.	Parent=comp117131_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4690656	4690853	.	-	0	Parent=comp117131_c0_seq1.mrna1
Chr1	gffcl	locus	4691321	4691941	.	-	.	ID=RLOC_00005293;geneIDs=comp150263_c0_seq1.path1;transcripts=comp150263_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4691321	4691941	.	-	.	ID=comp150263_c0_seq1.mrna1;geneID=comp150263_c0_seq1.path1;Name=comp150263_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=619;mismatches=2;indels=0;unknowns=0;Target=comp150263_c0_seq1 621 1 .;CDS_Target=comp150263_c0_seq1 356 255 .;locus=RLOC_00005293
Chr1	stalkie_big_nohaplotig	exon	4691321	4691941	99	-	.	Parent=comp150263_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4691586	4691687	.	-	0	Parent=comp150263_c0_seq1.mrna1
Chr1	gffcl	locus	4692863	4693558	.	-	.	ID=RLOC_00005294;geneIDs=FBgn0035816.1.path1;transcripts=FBgn0035816.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4692863	4693558	.	-	.	ID=FBgn0035816.1.mrna1;geneID=FBgn0035816.1.path1;Name=FBgn0035816.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=696;mismatches=0;indels=0;unknowns=0;Target=FBgn0035816.1 696 1 .;locus=RLOC_00005294
Chr1	stalkie_big_nohaplotig	exon	4692863	4693558	100	-	.	Parent=FBgn0035816.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4692863	4693558	.	-	0	Parent=FBgn0035816.1.mrna1
Chr1	gffcl	locus	4719210	4720988	.	-	.	ID=RLOC_00005295;geneIDs=FBgn0261387.5.path1;transcripts=FBgn0261387.5.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4719210	4720988	.	-	.	ID=FBgn0261387.5.mrna1;geneID=FBgn0261387.5.path1;Name=FBgn0261387.5;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1770;mismatches=9;indels=0;unknowns=0;Target=FBgn0261387.5 1779 1 .;locus=RLOC_00005295
Chr1	stalkie_big_nohaplotig	exon	4719210	4720988	99	-	.	Parent=FBgn0261387.5.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4719210	4720988	.	-	0	Parent=FBgn0261387.5.mrna1
Chr1	gffcl	locus	4778313	5120902	.	.	.	ID=RLOC_00005296;geneIDs=FBgn0003710.path1,FBgn0003710.1.path1,FBgn0035690.1.path2,FBgn0035923.1.path1,comp149479_c0_seq1.path1,comp151131_c0_seq1.path1,comp151170_c1_seq1.path1;transcripts=comp151170_c1_seq1.mrna1,comp151131_c0_seq1.mrna1,comp149479_c0_seq1.mrna1,FBgn0003710.1.mrna1,FBgn0035690.1.mrna2,FBgn0035923.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4778313	5034896	.	+	.	ID=comp151170_c1_seq1.mrna1;geneID=comp151170_c1_seq1.path1;Name=comp151170_c1_seq1;Dir=indeterminatecoverage=89.7;identity=88.8;matches=1523;mismatches=115;indels=77;unknowns=0;Target=comp151170_c1_seq1 1781 1599 .;locus=RLOC_00005296
Chr1	stalkie_big_nohaplotig	exon	4778313	4778329	100	+	.	Parent=comp151170_c1_seq1.mrna1;Target=comp151170_c1_seq1 209 193 .
Chr1	stalkie_big_nohaplotig	exon	4791534	4791536	100	+	.	Parent=comp151170_c1_seq1.mrna1;Target=comp151170_c1_seq1 229 227 .
Chr1	stalkie_big_nohaplotig	exon	4798056	4798059	100	+	.	Parent=comp151170_c1_seq1.mrna1;Target=comp151170_c1_seq1 233 230 .
Chr1	stalkie_big_nohaplotig	exon	4802009	4802013	100	+	.	Parent=comp151170_c1_seq1.mrna1;Target=comp151170_c1_seq1 238 234 .
Chr1	stalkie_big_nohaplotig	exon	4802710	4802715	100	+	.	Parent=comp151170_c1_seq1.mrna1;Target=comp151170_c1_seq1 244 239 .
Chr1	stalkie_big_nohaplotig	exon	4809444	4809445	100	+	.	Parent=comp151170_c1_seq1.mrna1;Target=comp151170_c1_seq1 246 245 .
Chr1	stalkie_big_nohaplotig	exon	4817407	4817422	100	+	.	Parent=comp151170_c1_seq1.mrna1;Target=comp151170_c1_seq1 262 247 .
Chr1	stalkie_big_nohaplotig	exon	4822245	4822252	100	+	.	Parent=comp151170_c1_seq1.mrna1;Target=comp151170_c1_seq1 270 263 .
Chr1	stalkie_big_nohaplotig	exon	4828281	4828347	56	+	.	Parent=comp151170_c1_seq1.mrna1;Target=comp151170_c1_seq1 330 271 .
Chr1	stalkie_big_nohaplotig	exon	4829074	4829085	100	+	.	Parent=comp151170_c1_seq1.mrna1;Target=comp151170_c1_seq1 342 331 .
Chr1	stalkie_big_nohaplotig	exon	4833736	4833758	51	+	.	Parent=comp151170_c1_seq1.mrna1;Target=comp151170_c1_seq1 378 343 .
Chr1	stalkie_big_nohaplotig	exon	4838314	4838316	100	+	.	Parent=comp151170_c1_seq1.mrna1;Target=comp151170_c1_seq1 381 379 .
Chr1	stalkie_big_nohaplotig	exon	4842364	4842375	100	+	.	Parent=comp151170_c1_seq1.mrna1;Target=comp151170_c1_seq1 393 382 .
Chr1	stalkie_big_nohaplotig	exon	4847342	4847344	100	+	.	Parent=comp151170_c1_seq1.mrna1;Target=comp151170_c1_seq1 396 394 .
Chr1	stalkie_big_nohaplotig	exon	4853898	4853906	88	+	.	Parent=comp151170_c1_seq1.mrna1;Target=comp151170_c1_seq1 405 397 .
Chr1	stalkie_big_nohaplotig	exon	4869495	4869504	100	+	.	Parent=comp151170_c1_seq1.mrna1;Target=comp151170_c1_seq1 415 406 .
Chr1	stalkie_big_nohaplotig	exon	4878757	4878762	100	+	.	Parent=comp151170_c1_seq1.mrna1;Target=comp151170_c1_seq1 421 416 .
Chr1	stalkie_big_nohaplotig	exon	4880071	4880075	100	+	.	Parent=comp151170_c1_seq1.mrna1;Target=comp151170_c1_seq1 432 428 .
Chr1	stalkie_big_nohaplotig	exon	4887184	4887185	100	+	.	Parent=comp151170_c1_seq1.mrna1;Target=comp151170_c1_seq1 434 433 .
Chr1	stalkie_big_nohaplotig	exon	4898069	4898071	100	+	.	Parent=comp151170_c1_seq1.mrna1;Target=comp151170_c1_seq1 437 435 .
Chr1	stalkie_big_nohaplotig	exon	5033365	5034100	97	+	.	Parent=comp151170_c1_seq1.mrna1;Target=comp151170_c1_seq1 1174 438 .
Chr1	stalkie_big_nohaplotig	exon	5034152	5034896	83	+	.	Parent=comp151170_c1_seq1.mrna1;Target=comp151170_c1_seq1 1869 1175 .
Chr1	stalkie_big_nohaplotig	CDS	5034617	5034808	.	+	0	Parent=comp151170_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4879001	4880157	.	+	.	ID=comp151131_c0_seq1.mrna1;geneID=comp151131_c0_seq1.path1;Name=comp151131_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1156;mismatches=1;indels=0;unknowns=0;Target=comp151131_c0_seq1 1157 1 .;CDS_Target=comp151131_c0_seq1 1079 921 .;locus=RLOC_00005296
Chr1	stalkie_big_nohaplotig	exon	4879001	4880157	99	+	.	Parent=comp151131_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4879921	4880079	.	+	0	Parent=comp151131_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4974233	5120902	.	+	.	ID=comp149479_c0_seq1.mrna1;geneID=comp149479_c0_seq1.path1;Name=comp149479_c0_seq1;Dir=indeterminatecoverage=93.3;identity=99.1;matches=998;mismatches=3;indels=6;unknowns=0;Target=comp149479_c0_seq1 251 129 .;locus=RLOC_00005296
Chr1	stalkie_big_nohaplotig	exon	4974233	4975089	99	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 857 1 .
Chr1	stalkie_big_nohaplotig	exon	4977604	4977606	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 860 858 .
Chr1	stalkie_big_nohaplotig	exon	4981824	4981827	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 864 861 .
Chr1	stalkie_big_nohaplotig	exon	4997905	4997910	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 870 865 .
Chr1	stalkie_big_nohaplotig	exon	4997917	4997922	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 915 910 .
Chr1	stalkie_big_nohaplotig	exon	4999313	4999326	85	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 929 916 .
Chr1	stalkie_big_nohaplotig	exon	5001651	5001655	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 934 930 .
Chr1	stalkie_big_nohaplotig	exon	5006732	5006733	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 936 935 .
Chr1	stalkie_big_nohaplotig	exon	5009254	5009256	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 939 937 .
Chr1	stalkie_big_nohaplotig	exon	5018386	5018397	66	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 957 940 .
Chr1	stalkie_big_nohaplotig	exon	5019834	5019843	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 967 958 .
Chr1	stalkie_big_nohaplotig	exon	5020501	5020502	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 969 968 .
Chr1	stalkie_big_nohaplotig	exon	5021805	5021810	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 975 970 .
Chr1	stalkie_big_nohaplotig	exon	5027250	5027255	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 981 976 .
Chr1	stalkie_big_nohaplotig	exon	5033854	5033855	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 983 982 .
Chr1	stalkie_big_nohaplotig	exon	5034017	5034021	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 988 984 .
Chr1	stalkie_big_nohaplotig	exon	5034172	5034183	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 1000 989 .
Chr1	stalkie_big_nohaplotig	exon	5039282	5039285	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 1004 1001 .
Chr1	stalkie_big_nohaplotig	exon	5041565	5041570	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 1010 1005 .
Chr1	stalkie_big_nohaplotig	exon	5048437	5048440	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 1014 1011 .
Chr1	stalkie_big_nohaplotig	exon	5052289	5052290	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 1016 1015 .
Chr1	stalkie_big_nohaplotig	exon	5057535	5057543	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 1025 1017 .
Chr1	stalkie_big_nohaplotig	exon	5061285	5061286	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 1027 1026 .
Chr1	stalkie_big_nohaplotig	exon	5066913	5066914	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 1029 1028 .
Chr1	stalkie_big_nohaplotig	exon	5103097	5103105	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 1038 1030 .
Chr1	stalkie_big_nohaplotig	exon	5120420	5120421	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 1040 1039 .
Chr1	stalkie_big_nohaplotig	exon	5120897	5120902	100	+	.	Parent=comp149479_c0_seq1.mrna1;Target=comp149479_c0_seq1 1046 1041 .
Chr1	stalkie_big_nohaplotig	CDS	4974361	4974483	.	+	0	Parent=comp149479_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4977514	4978702	.	+	.	ID=FBgn0003710.1.mrna1;geneID=FBgn0003710.1.path1;Name=FBgn0003710.1;Dir=indeterminatecoverage=95.1;identity=99.9;matches=1189;mismatches=0;indels=1;unknowns=0;Target=FBgn0003710.1 1190 1 .;CDS_Target=FBgn0003710.1 164 3 .;locus=RLOC_00005296
Chr1	stalkie_big_nohaplotig	exon	4977514	4978702	99	+	.	Parent=FBgn0003710.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4977516	4977676	.	+	0	Parent=FBgn0003710.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5024864	5027278	.	-	.	ID=FBgn0035690.1.mrna2;geneID=FBgn0035690.1.path2;Name=FBgn0035690.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=2403;mismatches=12;indels=0;unknowns=0;Target=FBgn0035690.1 2415 1 .;locus=RLOC_00005296
Chr1	stalkie_big_nohaplotig	exon	5024864	5027278	99	-	.	Parent=FBgn0035690.1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	5024864	5027278	.	-	0	Parent=FBgn0035690.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	5061464	5067149	.	+	.	ID=FBgn0035923.1.mrna1;geneID=FBgn0035923.1.path1;Name=FBgn0035923.1;Dir=sensecoverage=100.0;identity=100.0;matches=3746;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005296
Chr1	stalkie_big_nohaplotig	exon	5061464	5061487	100	+	.	Parent=FBgn0035923.1.mrna1;Target=FBgn0035923.1 1 24 +
Chr1	stalkie_big_nohaplotig	exon	5061552	5061763	100	+	.	Parent=FBgn0035923.1.mrna1;Target=FBgn0035923.1 25 236 +
Chr1	stalkie_big_nohaplotig	exon	5061826	5063921	100	+	.	Parent=FBgn0035923.1.mrna1;Target=FBgn0035923.1 237 2332 +
Chr1	stalkie_big_nohaplotig	exon	5063992	5064186	100	+	.	Parent=FBgn0035923.1.mrna1;Target=FBgn0035923.1 2333 2527 +
Chr1	stalkie_big_nohaplotig	exon	5064250	5064532	100	+	.	Parent=FBgn0035923.1.mrna1;Target=FBgn0035923.1 2528 2810 +
Chr1	stalkie_big_nohaplotig	exon	5064594	5064777	100	+	.	Parent=FBgn0035923.1.mrna1;Target=FBgn0035923.1 2811 2994 +
Chr1	stalkie_big_nohaplotig	exon	5064844	5064971	100	+	.	Parent=FBgn0035923.1.mrna1;Target=FBgn0035923.1 2995 3122 +
Chr1	stalkie_big_nohaplotig	exon	5066448	5066638	100	+	.	Parent=FBgn0035923.1.mrna1;Target=FBgn0035923.1 3123 3313 +
Chr1	stalkie_big_nohaplotig	exon	5066716	5067149	99	+	.	Parent=FBgn0035923.1.mrna1;Target=FBgn0035923.1 3314 3747 +
Chr1	stalkie_big_nohaplotig	CDS	5061464	5061487	.	+	0	Parent=FBgn0035923.1.mrna1;Target=FBgn0035923.1 1 24 +
Chr1	stalkie_big_nohaplotig	CDS	5061552	5061763	.	+	0	Parent=FBgn0035923.1.mrna1;Target=FBgn0035923.1 25 236 +
Chr1	stalkie_big_nohaplotig	CDS	5061826	5063921	.	+	1	Parent=FBgn0035923.1.mrna1;Target=FBgn0035923.1 237 2332 +
Chr1	stalkie_big_nohaplotig	CDS	5063992	5064186	.	+	2	Parent=FBgn0035923.1.mrna1;Target=FBgn0035923.1 2333 2527 +
Chr1	stalkie_big_nohaplotig	CDS	5064250	5064532	.	+	2	Parent=FBgn0035923.1.mrna1;Target=FBgn0035923.1 2528 2810 +
Chr1	stalkie_big_nohaplotig	CDS	5064594	5064777	.	+	1	Parent=FBgn0035923.1.mrna1;Target=FBgn0035923.1 2811 2994 +
Chr1	stalkie_big_nohaplotig	CDS	5064844	5064971	.	+	0	Parent=FBgn0035923.1.mrna1;Target=FBgn0035923.1 2995 3122 +
Chr1	stalkie_big_nohaplotig	CDS	5066448	5066638	.	+	1	Parent=FBgn0035923.1.mrna1;Target=FBgn0035923.1 3123 3313 +
Chr1	stalkie_big_nohaplotig	CDS	5066716	5067149	.	+	2	Parent=FBgn0035923.1.mrna1;Target=FBgn0035923.1 3314 3747 +
Chr1	gffcl	locus	4780536	4781545	.	-	.	ID=RLOC_00005297;geneIDs=comp153473_c0_seq1.path1;transcripts=comp153473_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4780536	4781545	.	-	.	ID=comp153473_c0_seq1.mrna1;geneID=comp153473_c0_seq1.path1;Name=comp153473_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1008;mismatches=2;indels=0;unknowns=0;Target=comp153473_c0_seq1 1010 1 .;CDS_Target=comp153473_c0_seq1 921 784 .;locus=RLOC_00005297
Chr1	stalkie_big_nohaplotig	exon	4780536	4781545	99	-	.	Parent=comp153473_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4780625	4780762	.	-	0	Parent=comp153473_c0_seq1.mrna1
Chr1	gffcl	locus	4782022	4828015	.	.	.	ID=RLOC_00005298;geneIDs=FBgn0035815.1.path1,comp138126_c1_seq1.path1,comp143213_c0_seq1.path1;transcripts=FBgn0035815.1.mrna1,comp138126_c1_seq1.mrna1,comp143213_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4782022	4828015	.	+	.	ID=FBgn0035815.1.mrna1;geneID=FBgn0035815.1.path1;Name=FBgn0035815.1;Dir=sensecoverage=100.0;identity=100.0;matches=1692;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005298
Chr1	stalkie_big_nohaplotig	exon	4782022	4782156	100	+	.	Parent=FBgn0035815.1.mrna1;Target=FBgn0035815.1 1 135 +
Chr1	stalkie_big_nohaplotig	exon	4795509	4795666	100	+	.	Parent=FBgn0035815.1.mrna1;Target=FBgn0035815.1 136 293 +
Chr1	stalkie_big_nohaplotig	exon	4795720	4795867	100	+	.	Parent=FBgn0035815.1.mrna1;Target=FBgn0035815.1 294 441 +
Chr1	stalkie_big_nohaplotig	exon	4795951	4796088	100	+	.	Parent=FBgn0035815.1.mrna1;Target=FBgn0035815.1 442 579 +
Chr1	stalkie_big_nohaplotig	exon	4798966	4799226	100	+	.	Parent=FBgn0035815.1.mrna1;Target=FBgn0035815.1 580 840 +
Chr1	stalkie_big_nohaplotig	exon	4799294	4799723	100	+	.	Parent=FBgn0035815.1.mrna1;Target=FBgn0035815.1 841 1270 +
Chr1	stalkie_big_nohaplotig	exon	4827416	4827534	100	+	.	Parent=FBgn0035815.1.mrna1;Target=FBgn0035815.1 1271 1389 +
Chr1	stalkie_big_nohaplotig	exon	4827637	4827762	100	+	.	Parent=FBgn0035815.1.mrna1;Target=FBgn0035815.1 1390 1515 +
Chr1	stalkie_big_nohaplotig	exon	4827839	4828015	100	+	.	Parent=FBgn0035815.1.mrna1;Target=FBgn0035815.1 1516 1692 +
Chr1	stalkie_big_nohaplotig	CDS	4782022	4782156	.	+	0	Parent=FBgn0035815.1.mrna1;Target=FBgn0035815.1 1 135 +
Chr1	stalkie_big_nohaplotig	CDS	4795509	4795666	.	+	0	Parent=FBgn0035815.1.mrna1;Target=FBgn0035815.1 136 293 +
Chr1	stalkie_big_nohaplotig	CDS	4795720	4795867	.	+	1	Parent=FBgn0035815.1.mrna1;Target=FBgn0035815.1 294 441 +
Chr1	stalkie_big_nohaplotig	CDS	4795951	4796088	.	+	0	Parent=FBgn0035815.1.mrna1;Target=FBgn0035815.1 442 579 +
Chr1	stalkie_big_nohaplotig	CDS	4798966	4799226	.	+	0	Parent=FBgn0035815.1.mrna1;Target=FBgn0035815.1 580 840 +
Chr1	stalkie_big_nohaplotig	CDS	4799294	4799723	.	+	0	Parent=FBgn0035815.1.mrna1;Target=FBgn0035815.1 841 1270 +
Chr1	stalkie_big_nohaplotig	CDS	4827416	4827534	.	+	2	Parent=FBgn0035815.1.mrna1;Target=FBgn0035815.1 1271 1389 +
Chr1	stalkie_big_nohaplotig	CDS	4827637	4827762	.	+	0	Parent=FBgn0035815.1.mrna1;Target=FBgn0035815.1 1390 1515 +
Chr1	stalkie_big_nohaplotig	CDS	4827839	4828015	.	+	0	Parent=FBgn0035815.1.mrna1;Target=FBgn0035815.1 1516 1692 +
Chr1	stalkie_big_nohaplotig	mRNA	4796065	4796452	.	+	.	ID=comp138126_c1_seq1.mrna1;geneID=comp138126_c1_seq1.path1;Name=comp138126_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=387;mismatches=1;indels=0;unknowns=0;Target=comp138126_c1_seq1 388 1 .;CDS_Target=comp138126_c1_seq1 236 153 .;locus=RLOC_00005298
Chr1	stalkie_big_nohaplotig	exon	4796065	4796452	99	+	.	Parent=comp138126_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4796217	4796300	.	+	0	Parent=comp138126_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4798322	4798989	.	-	.	ID=comp143213_c0_seq1.mrna1;geneID=comp143213_c0_seq1.path1;Name=comp143213_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=667;mismatches=1;indels=0;unknowns=0;Target=comp143213_c0_seq1 668 1 .;CDS_Target=comp143213_c0_seq1 443 348 .;locus=RLOC_00005298
Chr1	stalkie_big_nohaplotig	exon	4798322	4798989	99	-	.	Parent=comp143213_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4798547	4798642	.	-	0	Parent=comp143213_c0_seq1.mrna1
Chr1	gffcl	locus	4809623	4815661	.	+	.	ID=RLOC_00005299;geneIDs=FBgn0035813.1.path1;transcripts=FBgn0035813.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4809623	4815661	.	+	.	ID=FBgn0035813.1.mrna1;geneID=FBgn0035813.1.path1;Name=FBgn0035813.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=6039;mismatches=0;indels=0;unknowns=0;Target=FBgn0035813.1 6039 1 .;locus=RLOC_00005299
Chr1	stalkie_big_nohaplotig	exon	4809623	4815661	100	+	.	Parent=FBgn0035813.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4809623	4815661	.	+	0	Parent=FBgn0035813.1.mrna1
Chr1	gffcl	locus	4832623	4851383	.	+	.	ID=RLOC_00005300;geneIDs=FBgn0010280.1.path1;transcripts=FBgn0010280.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4832623	4851383	.	+	.	ID=FBgn0010280.1.mrna1;geneID=FBgn0010280.1.path1;Name=FBgn0010280.1;Dir=sensecoverage=100.0;identity=100.0;matches=3515;mismatches=0;indels=1;unknowns=0;locus=RLOC_00005300
Chr1	stalkie_big_nohaplotig	exon	4832623	4832673	100	+	.	Parent=FBgn0010280.1.mrna1;Target=FBgn0010280.1 1 51 +
Chr1	stalkie_big_nohaplotig	exon	4835168	4835955	99	+	.	Parent=FBgn0010280.1.mrna1;Target=FBgn0010280.1 52 840 +
Chr1	stalkie_big_nohaplotig	exon	4839144	4839308	100	+	.	Parent=FBgn0010280.1.mrna1;Target=FBgn0010280.1 841 1005 +
Chr1	stalkie_big_nohaplotig	exon	4839657	4839974	100	+	.	Parent=FBgn0010280.1.mrna1;Target=FBgn0010280.1 1006 1323 +
Chr1	stalkie_big_nohaplotig	exon	4844184	4844639	100	+	.	Parent=FBgn0010280.1.mrna1;Target=FBgn0010280.1 1324 1779 +
Chr1	stalkie_big_nohaplotig	exon	4847628	4847741	100	+	.	Parent=FBgn0010280.1.mrna1;Target=FBgn0010280.1 1780 1893 +
Chr1	stalkie_big_nohaplotig	exon	4847803	4848063	100	+	.	Parent=FBgn0010280.1.mrna1;Target=FBgn0010280.1 1894 2154 +
Chr1	stalkie_big_nohaplotig	exon	4848124	4849029	100	+	.	Parent=FBgn0010280.1.mrna1;Target=FBgn0010280.1 2155 3060 +
Chr1	stalkie_big_nohaplotig	exon	4849099	4849272	100	+	.	Parent=FBgn0010280.1.mrna1;Target=FBgn0010280.1 3061 3234 +
Chr1	stalkie_big_nohaplotig	exon	4849334	4849459	100	+	.	Parent=FBgn0010280.1.mrna1;Target=FBgn0010280.1 3235 3360 +
Chr1	stalkie_big_nohaplotig	exon	4851228	4851383	100	+	.	Parent=FBgn0010280.1.mrna1;Target=FBgn0010280.1 3361 3516 +
Chr1	stalkie_big_nohaplotig	CDS	4835530	4835955	.	+	0	Parent=FBgn0010280.1.mrna1;Target=FBgn0010280.1 415 840 +
Chr1	stalkie_big_nohaplotig	CDS	4839144	4839308	.	+	0	Parent=FBgn0010280.1.mrna1;Target=FBgn0010280.1 841 1005 +
Chr1	stalkie_big_nohaplotig	CDS	4839657	4839974	.	+	0	Parent=FBgn0010280.1.mrna1;Target=FBgn0010280.1 1006 1323 +
Chr1	stalkie_big_nohaplotig	CDS	4844184	4844639	.	+	0	Parent=FBgn0010280.1.mrna1;Target=FBgn0010280.1 1324 1779 +
Chr1	stalkie_big_nohaplotig	CDS	4847628	4847741	.	+	0	Parent=FBgn0010280.1.mrna1;Target=FBgn0010280.1 1780 1893 +
Chr1	stalkie_big_nohaplotig	CDS	4847803	4848063	.	+	0	Parent=FBgn0010280.1.mrna1;Target=FBgn0010280.1 1894 2154 +
Chr1	stalkie_big_nohaplotig	CDS	4848124	4849029	.	+	0	Parent=FBgn0010280.1.mrna1;Target=FBgn0010280.1 2155 3060 +
Chr1	stalkie_big_nohaplotig	CDS	4849099	4849272	.	+	0	Parent=FBgn0010280.1.mrna1;Target=FBgn0010280.1 3061 3234 +
Chr1	stalkie_big_nohaplotig	CDS	4849334	4849459	.	+	0	Parent=FBgn0010280.1.mrna1;Target=FBgn0010280.1 3235 3360 +
Chr1	stalkie_big_nohaplotig	CDS	4851228	4851383	.	+	0	Parent=FBgn0010280.1.mrna1;Target=FBgn0010280.1 3361 3516 +
Chr1	gffcl	locus	4852538	4852970	.	-	.	ID=RLOC_00005301;geneIDs=comp116522_c0_seq1.path1;transcripts=comp116522_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4852538	4852970	.	-	.	ID=comp116522_c0_seq1.mrna1;geneID=comp116522_c0_seq1.path1;Name=comp116522_c0_seq1;Dir=indeterminatecoverage=96.9;identity=100.0;matches=433;mismatches=0;indels=0;unknowns=0;Target=comp116522_c0_seq1 433 1 .;CDS_Target=comp116522_c0_seq1 128 3 .;locus=RLOC_00005301
Chr1	stalkie_big_nohaplotig	exon	4852538	4852970	100	-	.	Parent=comp116522_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4852843	4852968	.	-	0	Parent=comp116522_c0_seq1.mrna1
Chr1	gffcl	locus	4855934	4873921	.	-	.	ID=RLOC_00005302;geneIDs=FBgn0035287.1.path1;transcripts=FBgn0035287.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4855934	4873921	.	-	.	ID=FBgn0035287.1.mrna1;geneID=FBgn0035287.1.path1;Name=FBgn0035287.1;Dir=sensecoverage=100.0;identity=100.0;matches=1077;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005302
Chr1	stalkie_big_nohaplotig	exon	4855934	4856030	100	-	.	Parent=FBgn0035287.1.mrna1;Target=FBgn0035287.1 981 1077 +
Chr1	stalkie_big_nohaplotig	exon	4856096	4856427	100	-	.	Parent=FBgn0035287.1.mrna1;Target=FBgn0035287.1 649 980 +
Chr1	stalkie_big_nohaplotig	exon	4858556	4858711	100	-	.	Parent=FBgn0035287.1.mrna1;Target=FBgn0035287.1 493 648 +
Chr1	stalkie_big_nohaplotig	exon	4860882	4861026	100	-	.	Parent=FBgn0035287.1.mrna1;Target=FBgn0035287.1 348 492 +
Chr1	stalkie_big_nohaplotig	exon	4861086	4861152	100	-	.	Parent=FBgn0035287.1.mrna1;Target=FBgn0035287.1 281 347 +
Chr1	stalkie_big_nohaplotig	exon	4863568	4863715	100	-	.	Parent=FBgn0035287.1.mrna1;Target=FBgn0035287.1 133 280 +
Chr1	stalkie_big_nohaplotig	exon	4873790	4873921	100	-	.	Parent=FBgn0035287.1.mrna1;Target=FBgn0035287.1 1 132 +
Chr1	stalkie_big_nohaplotig	CDS	4855934	4856030	.	-	1	Parent=FBgn0035287.1.mrna1;Target=FBgn0035287.1 981 1077 +
Chr1	stalkie_big_nohaplotig	CDS	4856096	4856427	.	-	0	Parent=FBgn0035287.1.mrna1;Target=FBgn0035287.1 649 980 +
Chr1	stalkie_big_nohaplotig	CDS	4858556	4858711	.	-	0	Parent=FBgn0035287.1.mrna1;Target=FBgn0035287.1 493 648 +
Chr1	stalkie_big_nohaplotig	CDS	4860882	4861026	.	-	1	Parent=FBgn0035287.1.mrna1;Target=FBgn0035287.1 348 492 +
Chr1	stalkie_big_nohaplotig	CDS	4861086	4861152	.	-	2	Parent=FBgn0035287.1.mrna1;Target=FBgn0035287.1 281 347 +
Chr1	stalkie_big_nohaplotig	CDS	4863568	4863715	.	-	0	Parent=FBgn0035287.1.mrna1;Target=FBgn0035287.1 133 280 +
Chr1	stalkie_big_nohaplotig	CDS	4873790	4873921	.	-	0	Parent=FBgn0035287.1.mrna1;Target=FBgn0035287.1 1 132 +
Chr1	gffcl	locus	4859587	4860343	.	-	.	ID=RLOC_00005303;geneIDs=comp130771_c0_seq1.path1;transcripts=comp130771_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4859587	4860343	.	-	.	ID=comp130771_c0_seq1.mrna1;geneID=comp130771_c0_seq1.path1;Name=comp130771_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.6;matches=754;mismatches=2;indels=1;unknowns=0;Target=comp130771_c0_seq1 756 1 .;CDS_Target=comp130771_c0_seq1 538 92 .;locus=RLOC_00005303
Chr1	stalkie_big_nohaplotig	exon	4859587	4860343	99	-	.	Parent=comp130771_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4859806	4860252	.	-	0	Parent=comp130771_c0_seq1.mrna1
Chr1	gffcl	locus	4864107	4864484	.	-	.	ID=RLOC_00005304;geneIDs=comp113510_c0_seq1.path1;transcripts=comp113510_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4864107	4864484	.	-	.	ID=comp113510_c0_seq1.mrna1;geneID=comp113510_c0_seq1.path1;Name=comp113510_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.5;matches=376;mismatches=1;indels=1;unknowns=0;Target=comp113510_c0_seq1 377 1 .;CDS_Target=comp113510_c0_seq1 144 1 .;locus=RLOC_00005304
Chr1	stalkie_big_nohaplotig	exon	4864107	4864484	99	-	.	Parent=comp113510_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4864340	4864484	.	-	0	Parent=comp113510_c0_seq1.mrna1
Chr1	gffcl	locus	4874009	4874579	.	-	.	ID=RLOC_00005305;geneIDs=comp144203_c0_seq1.path1;transcripts=comp144203_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4874009	4874579	.	-	.	ID=comp144203_c0_seq1.mrna1;geneID=comp144203_c0_seq1.path1;Name=comp144203_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=514;mismatches=0;indels=0;unknowns=0;Target=comp144203_c0_seq1 224 361 +;locus=RLOC_00005305
Chr1	stalkie_big_nohaplotig	exon	4874009	4874032	100	-	.	Parent=comp144203_c0_seq1.mrna1;Target=comp144203_c0_seq1 491 514 +
Chr1	stalkie_big_nohaplotig	exon	4874090	4874579	100	-	.	Parent=comp144203_c0_seq1.mrna1;Target=comp144203_c0_seq1 1 490 +
Chr1	stalkie_big_nohaplotig	CDS	4874219	4874356	.	-	0	Parent=comp144203_c0_seq1.mrna1
Chr1	gffcl	locus	4883312	4884055	.	-	.	ID=RLOC_00005306;geneIDs=FBgn0000109.1.path1;transcripts=FBgn0000109.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4883312	4884055	.	-	.	ID=FBgn0000109.1.mrna1;geneID=FBgn0000109.1.path1;Name=FBgn0000109.1;Dir=sensecoverage=100.0;identity=100.0;matches=618;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005306
Chr1	stalkie_big_nohaplotig	exon	4883312	4883533	100	-	.	Parent=FBgn0000109.1.mrna1;Target=FBgn0000109.1 397 618 +
Chr1	stalkie_big_nohaplotig	exon	4883590	4883827	100	-	.	Parent=FBgn0000109.1.mrna1;Target=FBgn0000109.1 159 396 +
Chr1	stalkie_big_nohaplotig	exon	4883898	4884055	100	-	.	Parent=FBgn0000109.1.mrna1;Target=FBgn0000109.1 1 158 +
Chr1	stalkie_big_nohaplotig	CDS	4883312	4883533	.	-	0	Parent=FBgn0000109.1.mrna1;Target=FBgn0000109.1 397 618 +
Chr1	stalkie_big_nohaplotig	CDS	4883590	4883827	.	-	1	Parent=FBgn0000109.1.mrna1;Target=FBgn0000109.1 159 396 +
Chr1	stalkie_big_nohaplotig	CDS	4883898	4884055	.	-	0	Parent=FBgn0000109.1.mrna1;Target=FBgn0000109.1 1 158 +
Chr1	gffcl	locus	4905165	4906913	.	+	.	ID=RLOC_00005307;geneIDs=FBgn0261387.4.path1;transcripts=FBgn0261387.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4905165	4906913	.	+	.	ID=FBgn0261387.4.mrna1;geneID=FBgn0261387.4.path1;Name=FBgn0261387.4;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1749;mismatches=0;indels=0;unknowns=0;Target=FBgn0261387.4 1749 1 .;locus=RLOC_00005307
Chr1	stalkie_big_nohaplotig	exon	4905165	4906913	100	+	.	Parent=FBgn0261387.4.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4905165	4906913	.	+	0	Parent=FBgn0261387.4.mrna1
Chr1	gffcl	locus	4914701	4919388	.	+	.	ID=RLOC_00005308;geneIDs=FBgn0262624.1.path1;transcripts=FBgn0262624.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4914701	4919388	.	+	.	ID=FBgn0262624.1.mrna1;geneID=FBgn0262624.1.path1;Name=FBgn0262624.1;Dir=sensecoverage=100.0;identity=100.0;matches=762;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005308
Chr1	stalkie_big_nohaplotig	exon	4914701	4914848	100	+	.	Parent=FBgn0262624.1.mrna1;Target=FBgn0262624.1 1 148 +
Chr1	stalkie_big_nohaplotig	exon	4914942	4915075	100	+	.	Parent=FBgn0262624.1.mrna1;Target=FBgn0262624.1 149 282 +
Chr1	stalkie_big_nohaplotig	exon	4915142	4915268	100	+	.	Parent=FBgn0262624.1.mrna1;Target=FBgn0262624.1 283 409 +
Chr1	stalkie_big_nohaplotig	exon	4918967	4919209	100	+	.	Parent=FBgn0262624.1.mrna1;Target=FBgn0262624.1 410 652 +
Chr1	stalkie_big_nohaplotig	exon	4919279	4919388	100	+	.	Parent=FBgn0262624.1.mrna1;Target=FBgn0262624.1 653 762 +
Chr1	stalkie_big_nohaplotig	CDS	4914701	4914848	.	+	0	Parent=FBgn0262624.1.mrna1;Target=FBgn0262624.1 1 148 +
Chr1	stalkie_big_nohaplotig	CDS	4914942	4915075	.	+	2	Parent=FBgn0262624.1.mrna1;Target=FBgn0262624.1 149 282 +
Chr1	stalkie_big_nohaplotig	CDS	4915142	4915268	.	+	0	Parent=FBgn0262624.1.mrna1;Target=FBgn0262624.1 283 409 +
Chr1	stalkie_big_nohaplotig	CDS	4918967	4919209	.	+	2	Parent=FBgn0262624.1.mrna1;Target=FBgn0262624.1 410 652 +
Chr1	stalkie_big_nohaplotig	CDS	4919279	4919388	.	+	2	Parent=FBgn0262624.1.mrna1;Target=FBgn0262624.1 653 762 +
Chr1	gffcl	locus	4946163	4955201	.	-	.	ID=RLOC_00005309;geneIDs=FBgn0035290.1.path2,comp146517_c0_seq1.path1;transcripts=FBgn0035290.1.mrna2,comp146517_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4946163	4952016	.	-	.	ID=FBgn0035290.1.mrna2;geneID=FBgn0035290.1.path2;Name=FBgn0035290.1;Dir=sensecoverage=88.1;identity=99.7;matches=1579;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005309
Chr1	stalkie_big_nohaplotig	exon	4946163	4946516	99	-	.	Parent=FBgn0035290.1.mrna2;Target=FBgn0035290.1 1444 1797 +
Chr1	stalkie_big_nohaplotig	exon	4947292	4947417	100	-	.	Parent=FBgn0035290.1.mrna2;Target=FBgn0035290.1 1318 1443 +
Chr1	stalkie_big_nohaplotig	exon	4947480	4947733	100	-	.	Parent=FBgn0035290.1.mrna2;Target=FBgn0035290.1 1064 1317 +
Chr1	stalkie_big_nohaplotig	exon	4947800	4948055	98	-	.	Parent=FBgn0035290.1.mrna2;Target=FBgn0035290.1 808 1063 +
Chr1	stalkie_big_nohaplotig	exon	4948129	4948332	100	-	.	Parent=FBgn0035290.1.mrna2;Target=FBgn0035290.1 604 807 +
Chr1	stalkie_big_nohaplotig	exon	4949717	4949855	100	-	.	Parent=FBgn0035290.1.mrna2;Target=FBgn0035290.1 465 603 +
Chr1	stalkie_big_nohaplotig	exon	4951699	4951856	100	-	.	Parent=FBgn0035290.1.mrna2;Target=FBgn0035290.1 307 464 +
Chr1	stalkie_big_nohaplotig	exon	4951925	4952016	100	-	.	Parent=FBgn0035290.1.mrna2;Target=FBgn0035290.1 215 306 +
Chr1	stalkie_big_nohaplotig	CDS	4946163	4946516	.	-	2	Parent=FBgn0035290.1.mrna2;Target=FBgn0035290.1 1444 1797 +
Chr1	stalkie_big_nohaplotig	CDS	4947292	4947417	.	-	2	Parent=FBgn0035290.1.mrna2;Target=FBgn0035290.1 1318 1443 +
Chr1	stalkie_big_nohaplotig	CDS	4947480	4947733	.	-	1	Parent=FBgn0035290.1.mrna2;Target=FBgn0035290.1 1064 1317 +
Chr1	stalkie_big_nohaplotig	CDS	4947800	4948055	.	-	2	Parent=FBgn0035290.1.mrna2;Target=FBgn0035290.1 808 1063 +
Chr1	stalkie_big_nohaplotig	CDS	4948129	4948332	.	-	2	Parent=FBgn0035290.1.mrna2;Target=FBgn0035290.1 604 807 +
Chr1	stalkie_big_nohaplotig	CDS	4949717	4949855	.	-	0	Parent=FBgn0035290.1.mrna2;Target=FBgn0035290.1 465 603 +
Chr1	stalkie_big_nohaplotig	CDS	4951699	4951856	.	-	2	Parent=FBgn0035290.1.mrna2;Target=FBgn0035290.1 307 464 +
Chr1	stalkie_big_nohaplotig	CDS	4951925	4952016	.	-	1	Parent=FBgn0035290.1.mrna2;Target=FBgn0035290.1 215 306 +
Chr1	stalkie_big_nohaplotig	mRNA	4951993	4955201	.	-	.	ID=comp146517_c0_seq1.mrna1;geneID=comp146517_c0_seq1.path1;Name=comp146517_c0_seq1;Dir=sensecoverage=100.0;identity=96.0;matches=340;mismatches=9;indels=5;unknowns=0;Target=comp146517_c0_seq1 1 27 +;locus=RLOC_00005309
Chr1	stalkie_big_nohaplotig	exon	4951993	4952016	100	-	.	Parent=comp146517_c0_seq1.mrna1;Target=comp146517_c0_seq1 331 354 +
Chr1	stalkie_big_nohaplotig	exon	4954877	4955201	95	-	.	Parent=comp146517_c0_seq1.mrna1;Target=comp146517_c0_seq1 1 330 +
Chr1	stalkie_big_nohaplotig	CDS	4955180	4955201	.	-	0	Parent=comp146517_c0_seq1.mrna1
Chr1	gffcl	locus	4948496	4949091	.	+	.	ID=RLOC_00005310;geneIDs=comp611334_c0_seq1.path1;transcripts=comp611334_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4948496	4949091	.	+	.	ID=comp611334_c0_seq1.mrna1;geneID=comp611334_c0_seq1.path1;Name=comp611334_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=596;mismatches=0;indels=0;unknowns=0;Target=comp611334_c0_seq1 596 1 .;CDS_Target=comp611334_c0_seq1 391 263 .;locus=RLOC_00005310
Chr1	stalkie_big_nohaplotig	exon	4948496	4949091	100	+	.	Parent=comp611334_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4948758	4948886	.	+	0	Parent=comp611334_c0_seq1.mrna1
Chr1	gffcl	locus	4949157	4949537	.	-	.	ID=RLOC_00005311;geneIDs=comp116897_c0_seq1.path1;transcripts=comp116897_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4949157	4949537	.	-	.	ID=comp116897_c0_seq1.mrna1;geneID=comp116897_c0_seq1.path1;Name=comp116897_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=381;mismatches=0;indels=0;unknowns=0;Target=comp116897_c0_seq1 381 1 .;CDS_Target=comp116897_c0_seq1 91 2 .;locus=RLOC_00005311
Chr1	stalkie_big_nohaplotig	exon	4949157	4949537	100	-	.	Parent=comp116897_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4949447	4949536	.	-	0	Parent=comp116897_c0_seq1.mrna1
Chr1	gffcl	locus	4969268	4970003	.	-	.	ID=RLOC_00005312;geneIDs=comp147287_c0_seq1.path1;transcripts=comp147287_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4969268	4970003	.	-	.	ID=comp147287_c0_seq1.mrna1;geneID=comp147287_c0_seq1.path1;Name=comp147287_c0_seq1;Dir=sensecoverage=92.6;identity=98.4;matches=555;mismatches=9;indels=0;unknowns=0;Target=comp147287_c0_seq1 23 82 +;locus=RLOC_00005312
Chr1	stalkie_big_nohaplotig	exon	4969268	4969474	99	-	.	Parent=comp147287_c0_seq1.mrna1;Target=comp147287_c0_seq1 380 586 +
Chr1	stalkie_big_nohaplotig	exon	4969647	4970003	97	-	.	Parent=comp147287_c0_seq1.mrna1;Target=comp147287_c0_seq1 23 379 +
Chr1	stalkie_big_nohaplotig	CDS	4969944	4970003	.	-	0	Parent=comp147287_c0_seq1.mrna1
Chr1	gffcl	locus	4975272	4976345	.	+	.	ID=RLOC_00005313;geneIDs=comp146225_c0_seq1.path1;transcripts=comp146225_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4975272	4976345	.	+	.	ID=comp146225_c0_seq1.mrna1;geneID=comp146225_c0_seq1.path1;Name=comp146225_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1072;mismatches=2;indels=0;unknowns=0;Target=comp146225_c0_seq1 1074 1 .;CDS_Target=comp146225_c0_seq1 524 474 .;locus=RLOC_00005313
Chr1	stalkie_big_nohaplotig	exon	4975272	4976345	99	+	.	Parent=comp146225_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4975745	4975795	.	+	0	Parent=comp146225_c0_seq1.mrna1
Chr1	gffcl	locus	4976405	4976673	.	+	.	ID=RLOC_00005314;geneIDs=comp142192_c0_seq1.path1;transcripts=comp142192_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4976405	4976673	.	+	.	ID=comp142192_c0_seq1.mrna1;geneID=comp142192_c0_seq1.path1;Name=comp142192_c0_seq1;Dir=indeterminatecoverage=97.1;identity=100.0;matches=269;mismatches=0;indels=0;unknowns=0;Target=comp142192_c0_seq1 277 9 .;CDS_Target=comp142192_c0_seq1 76 11 .;locus=RLOC_00005314
Chr1	stalkie_big_nohaplotig	exon	4976405	4976673	100	+	.	Parent=comp142192_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	4976407	4976472	.	+	0	Parent=comp142192_c0_seq1.mrna1
Chr1	gffcl	locus	4992531	5004038	.	-	.	ID=RLOC_00005315;geneIDs=FBgn0263110.1.path1;transcripts=FBgn0263110.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	4992531	5004038	.	-	.	ID=FBgn0263110.1.mrna1;geneID=FBgn0263110.1.path1;Name=FBgn0263110.1;Dir=sensecoverage=82.1;identity=99.9;matches=5269;mismatches=5;indels=0;unknowns=0;locus=RLOC_00005315
Chr1	stalkie_big_nohaplotig	exon	4992531	4992718	100	-	.	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 5087 5274 +
Chr1	stalkie_big_nohaplotig	exon	4992791	4993127	100	-	.	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 4750 5086 +
Chr1	stalkie_big_nohaplotig	exon	4993177	4993467	100	-	.	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 4459 4749 +
Chr1	stalkie_big_nohaplotig	exon	4993553	4993642	100	-	.	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 4369 4458 +
Chr1	stalkie_big_nohaplotig	exon	4994381	4994514	100	-	.	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 4235 4368 +
Chr1	stalkie_big_nohaplotig	exon	4994593	4995181	99	-	.	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 3646 4234 +
Chr1	stalkie_big_nohaplotig	exon	4995246	4995967	100	-	.	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 2924 3645 +
Chr1	stalkie_big_nohaplotig	exon	4996025	4996571	100	-	.	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 2377 2923 +
Chr1	stalkie_big_nohaplotig	exon	4996629	4996796	100	-	.	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 2209 2376 +
Chr1	stalkie_big_nohaplotig	exon	4996863	4997115	100	-	.	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 1956 2208 +
Chr1	stalkie_big_nohaplotig	exon	4997183	4997427	100	-	.	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 1711 1955 +
Chr1	stalkie_big_nohaplotig	exon	4997494	4997701	100	-	.	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 1503 1710 +
Chr1	stalkie_big_nohaplotig	exon	4999737	5000059	100	-	.	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 1180 1502 +
Chr1	stalkie_big_nohaplotig	exon	5000122	5000394	100	-	.	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 907 1179 +
Chr1	stalkie_big_nohaplotig	exon	5000476	5000625	100	-	.	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 757 906 +
Chr1	stalkie_big_nohaplotig	exon	5000841	5000912	100	-	.	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 685 756 +
Chr1	stalkie_big_nohaplotig	exon	5001177	5001265	100	-	.	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 596 684 +
Chr1	stalkie_big_nohaplotig	exon	5001329	5001515	100	-	.	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 409 595 +
Chr1	stalkie_big_nohaplotig	exon	5003169	5003318	100	-	.	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 259 408 +
Chr1	stalkie_big_nohaplotig	exon	5003379	5003579	98	-	.	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 58 258 +
Chr1	stalkie_big_nohaplotig	exon	5003982	5004038	100	-	.	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 1 57 +
Chr1	stalkie_big_nohaplotig	CDS	4992531	4992718	.	-	2	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 5087 5274 +
Chr1	stalkie_big_nohaplotig	CDS	4992791	4993127	.	-	0	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 4750 5086 +
Chr1	stalkie_big_nohaplotig	CDS	4993177	4993467	.	-	0	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 4459 4749 +
Chr1	stalkie_big_nohaplotig	CDS	4993553	4993642	.	-	0	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 4369 4458 +
Chr1	stalkie_big_nohaplotig	CDS	4994381	4994514	.	-	2	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 4235 4368 +
Chr1	stalkie_big_nohaplotig	CDS	4994593	4995181	.	-	0	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 3646 4234 +
Chr1	stalkie_big_nohaplotig	CDS	4995246	4995967	.	-	2	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 2924 3645 +
Chr1	stalkie_big_nohaplotig	CDS	4996025	4996571	.	-	0	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 2377 2923 +
Chr1	stalkie_big_nohaplotig	CDS	4996629	4996796	.	-	0	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 2209 2376 +
Chr1	stalkie_big_nohaplotig	CDS	4996863	4997115	.	-	1	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 1956 2208 +
Chr1	stalkie_big_nohaplotig	CDS	4997183	4997427	.	-	0	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 1711 1955 +
Chr1	stalkie_big_nohaplotig	CDS	4997494	4997701	.	-	1	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 1503 1710 +
Chr1	stalkie_big_nohaplotig	CDS	4999737	5000059	.	-	0	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 1180 1502 +
Chr1	stalkie_big_nohaplotig	CDS	5000122	5000394	.	-	0	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 907 1179 +
Chr1	stalkie_big_nohaplotig	CDS	5000476	5000625	.	-	0	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 757 906 +
Chr1	stalkie_big_nohaplotig	CDS	5000841	5000912	.	-	0	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 685 756 +
Chr1	stalkie_big_nohaplotig	CDS	5001177	5001265	.	-	2	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 596 684 +
Chr1	stalkie_big_nohaplotig	CDS	5001329	5001515	.	-	0	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 409 595 +
Chr1	stalkie_big_nohaplotig	CDS	5003169	5003318	.	-	0	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 259 408 +
Chr1	stalkie_big_nohaplotig	CDS	5003379	5003579	.	-	0	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 58 258 +
Chr1	stalkie_big_nohaplotig	CDS	5003982	5004038	.	-	0	Parent=FBgn0263110.1.mrna1;Target=FBgn0263110.1 1 57 +
Chr1	gffcl	locus	5009300	5009410	.	-	.	ID=RLOC_00005316;geneIDs=FBgn0003710.1.path2,FBgn0040696.1.path2;transcripts=FBgn0040696.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	5009300	5009410	.	-	.	ID=FBgn0040696.1.mrna2;geneID=FBgn0040696.1.path2;Name=FBgn0040696.1;Dir=indeterminatecoverage=12.6;identity=100.0;matches=111;mismatches=0;indels=0;unknowns=0;Target=FBgn0040696.1 879 769 .;locus=RLOC_00005316
Chr1	stalkie_big_nohaplotig	exon	5009300	5009410	100	-	.	Parent=FBgn0040696.1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	5009300	5009410	.	-	0	Parent=FBgn0040696.1.mrna2
Chr1	gffcl	locus	5029313	5031284	.	+	.	ID=RLOC_00005317;geneIDs=FBgn0261111.1.path2;transcripts=FBgn0261111.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	5029313	5031284	.	+	.	ID=FBgn0261111.1.mrna2;geneID=FBgn0261111.1.path2;Name=FBgn0261111.1;Dir=sensecoverage=100.0;identity=99.6;matches=1381;mismatches=5;indels=0;unknowns=0;locus=RLOC_00005317
Chr1	stalkie_big_nohaplotig	exon	5029313	5029681	99	+	.	Parent=FBgn0261111.1.mrna2;Target=FBgn0261111.1 1 369 +
Chr1	stalkie_big_nohaplotig	exon	5029746	5030279	99	+	.	Parent=FBgn0261111.1.mrna2;Target=FBgn0261111.1 370 903 +
Chr1	stalkie_big_nohaplotig	exon	5030345	5030606	100	+	.	Parent=FBgn0261111.1.mrna2;Target=FBgn0261111.1 904 1165 +
Chr1	stalkie_big_nohaplotig	exon	5030999	5031101	99	+	.	Parent=FBgn0261111.1.mrna2;Target=FBgn0261111.1 1166 1268 +
Chr1	stalkie_big_nohaplotig	exon	5031167	5031284	100	+	.	Parent=FBgn0261111.1.mrna2;Target=FBgn0261111.1 1269 1386 +
Chr1	stalkie_big_nohaplotig	CDS	5029313	5029681	.	+	0	Parent=FBgn0261111.1.mrna2;Target=FBgn0261111.1 1 369 +
Chr1	stalkie_big_nohaplotig	CDS	5029746	5030279	.	+	0	Parent=FBgn0261111.1.mrna2;Target=FBgn0261111.1 370 903 +
Chr1	stalkie_big_nohaplotig	CDS	5030345	5030606	.	+	0	Parent=FBgn0261111.1.mrna2;Target=FBgn0261111.1 904 1165 +
Chr1	stalkie_big_nohaplotig	CDS	5030999	5031101	.	+	2	Parent=FBgn0261111.1.mrna2;Target=FBgn0261111.1 1166 1268 +
Chr1	stalkie_big_nohaplotig	CDS	5031167	5031284	.	+	1	Parent=FBgn0261111.1.mrna2;Target=FBgn0261111.1 1269 1386 +
Chr1	gffcl	locus	5035606	5036515	.	-	.	ID=RLOC_00005318;geneIDs=FBgn0035753.1.path2;transcripts=FBgn0035753.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	5035606	5036515	.	-	.	ID=FBgn0035753.1.mrna2;geneID=FBgn0035753.1.path2;Name=FBgn0035753.1;Dir=sensecoverage=100.0;identity=99.8;matches=626;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005318
Chr1	stalkie_big_nohaplotig	exon	5035606	5036079	99	-	.	Parent=FBgn0035753.1.mrna2;Target=FBgn0035753.1 154 627 +
Chr1	stalkie_big_nohaplotig	exon	5036215	5036301	100	-	.	Parent=FBgn0035753.1.mrna2;Target=FBgn0035753.1 67 153 +
Chr1	stalkie_big_nohaplotig	exon	5036450	5036515	100	-	.	Parent=FBgn0035753.1.mrna2;Target=FBgn0035753.1 1 66 +
Chr1	stalkie_big_nohaplotig	CDS	5035606	5036079	.	-	0	Parent=FBgn0035753.1.mrna2;Target=FBgn0035753.1 154 627 +
Chr1	stalkie_big_nohaplotig	CDS	5036215	5036301	.	-	0	Parent=FBgn0035753.1.mrna2;Target=FBgn0035753.1 67 153 +
Chr1	stalkie_big_nohaplotig	CDS	5036450	5036515	.	-	0	Parent=FBgn0035753.1.mrna2;Target=FBgn0035753.1 1 66 +
Chr1	gffcl	locus	5047000	5049489	.	+	.	ID=RLOC_00005319;geneIDs=FBgn0035294.1.path1;transcripts=FBgn0035294.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5047000	5049489	.	+	.	ID=FBgn0035294.1.mrna1;geneID=FBgn0035294.1.path1;Name=FBgn0035294.1;Dir=sensecoverage=100.0;identity=100.0;matches=1410;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005319
Chr1	stalkie_big_nohaplotig	exon	5047000	5047078	100	+	.	Parent=FBgn0035294.1.mrna1;Target=FBgn0035294.1 1 79 +
Chr1	stalkie_big_nohaplotig	exon	5047147	5047646	100	+	.	Parent=FBgn0035294.1.mrna1;Target=FBgn0035294.1 80 579 +
Chr1	stalkie_big_nohaplotig	exon	5047716	5047988	100	+	.	Parent=FBgn0035294.1.mrna1;Target=FBgn0035294.1 580 852 +
Chr1	stalkie_big_nohaplotig	exon	5048879	5049003	100	+	.	Parent=FBgn0035294.1.mrna1;Target=FBgn0035294.1 853 977 +
Chr1	stalkie_big_nohaplotig	exon	5049057	5049489	100	+	.	Parent=FBgn0035294.1.mrna1;Target=FBgn0035294.1 978 1410 +
Chr1	stalkie_big_nohaplotig	CDS	5047000	5047078	.	+	0	Parent=FBgn0035294.1.mrna1;Target=FBgn0035294.1 1 79 +
Chr1	stalkie_big_nohaplotig	CDS	5047147	5047646	.	+	2	Parent=FBgn0035294.1.mrna1;Target=FBgn0035294.1 80 579 +
Chr1	stalkie_big_nohaplotig	CDS	5047716	5047988	.	+	0	Parent=FBgn0035294.1.mrna1;Target=FBgn0035294.1 580 852 +
Chr1	stalkie_big_nohaplotig	CDS	5048879	5049003	.	+	0	Parent=FBgn0035294.1.mrna1;Target=FBgn0035294.1 853 977 +
Chr1	stalkie_big_nohaplotig	CDS	5049057	5049489	.	+	1	Parent=FBgn0035294.1.mrna1;Target=FBgn0035294.1 978 1410 +
Chr1	gffcl	locus	5049656	5052151	.	-	.	ID=RLOC_00005320;geneIDs=FBgn0041147.1.path1;transcripts=FBgn0041147.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5049656	5052151	.	-	.	ID=FBgn0041147.1.mrna1;geneID=FBgn0041147.1.path1;Name=FBgn0041147.1;Dir=sensecoverage=100.0;identity=99.3;matches=2273;mismatches=16;indels=0;unknowns=0;locus=RLOC_00005320
Chr1	stalkie_big_nohaplotig	exon	5049656	5050987	98	-	.	Parent=FBgn0041147.1.mrna1;Target=FBgn0041147.1 958 2289 +
Chr1	stalkie_big_nohaplotig	exon	5051064	5051485	100	-	.	Parent=FBgn0041147.1.mrna1;Target=FBgn0041147.1 536 957 +
Chr1	stalkie_big_nohaplotig	exon	5051551	5051938	100	-	.	Parent=FBgn0041147.1.mrna1;Target=FBgn0041147.1 148 535 +
Chr1	stalkie_big_nohaplotig	exon	5052005	5052151	100	-	.	Parent=FBgn0041147.1.mrna1;Target=FBgn0041147.1 1 147 +
Chr1	stalkie_big_nohaplotig	CDS	5049656	5050987	.	-	0	Parent=FBgn0041147.1.mrna1;Target=FBgn0041147.1 958 2289 +
Chr1	stalkie_big_nohaplotig	CDS	5051064	5051485	.	-	2	Parent=FBgn0041147.1.mrna1;Target=FBgn0041147.1 536 957 +
Chr1	stalkie_big_nohaplotig	CDS	5051551	5051938	.	-	0	Parent=FBgn0041147.1.mrna1;Target=FBgn0041147.1 148 535 +
Chr1	stalkie_big_nohaplotig	CDS	5052005	5052151	.	-	0	Parent=FBgn0041147.1.mrna1;Target=FBgn0041147.1 1 147 +
Chr1	gffcl	locus	5058420	5059852	.	-	.	ID=RLOC_00005321;geneIDs=FBgn0035471.1.path1;transcripts=FBgn0035471.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5058420	5059852	.	-	.	ID=FBgn0035471.1.mrna1;geneID=FBgn0035471.1.path1;Name=FBgn0035471.1;Dir=sensecoverage=100.0;identity=99.9;matches=944;mismatches=0;indels=1;unknowns=0;locus=RLOC_00005321
Chr1	stalkie_big_nohaplotig	exon	5058420	5058621	100	-	.	Parent=FBgn0035471.1.mrna1;Target=FBgn0035471.1 744 945 +
Chr1	stalkie_big_nohaplotig	exon	5058685	5058800	100	-	.	Parent=FBgn0035471.1.mrna1;Target=FBgn0035471.1 628 743 +
Chr1	stalkie_big_nohaplotig	exon	5058869	5059085	100	-	.	Parent=FBgn0035471.1.mrna1;Target=FBgn0035471.1 411 627 +
Chr1	stalkie_big_nohaplotig	exon	5059387	5059748	99	-	.	Parent=FBgn0035471.1.mrna1;Target=FBgn0035471.1 48 410 +
Chr1	stalkie_big_nohaplotig	exon	5059806	5059852	100	-	.	Parent=FBgn0035471.1.mrna1;Target=FBgn0035471.1 1 47 +
Chr1	stalkie_big_nohaplotig	CDS	5059708	5059748	.	-	0	Parent=FBgn0035471.1.mrna1;Target=FBgn0035471.1 48 89 +
Chr1	stalkie_big_nohaplotig	CDS	5059806	5059811	.	-	0	Parent=FBgn0035471.1.mrna1;Target=FBgn0035471.1 42 47 +
Chr1	gffcl	locus	5069958	5070590	.	+	.	ID=RLOC_00005322;geneIDs=FBgn0003149.1.path1;transcripts=FBgn0003149.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5069958	5070590	.	+	.	ID=FBgn0003149.1.mrna1;geneID=FBgn0003149.1.path1;Name=FBgn0003149.1;Dir=indeterminatecoverage=66.8;identity=100.0;matches=633;mismatches=0;indels=0;unknowns=0;Target=FBgn0003149.1 633 1 .;locus=RLOC_00005322
Chr1	stalkie_big_nohaplotig	exon	5069958	5070590	100	+	.	Parent=FBgn0003149.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5069958	5070590	.	+	0	Parent=FBgn0003149.1.mrna1
Chr1	gffcl	locus	5099879	5100271	.	-	.	ID=RLOC_00005323;geneIDs=comp118451_c0_seq1.path1;transcripts=comp118451_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5099879	5100271	.	-	.	ID=comp118451_c0_seq1.mrna1;geneID=comp118451_c0_seq1.path1;Name=comp118451_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=393;mismatches=0;indels=0;unknowns=0;Target=comp118451_c0_seq1 393 1 .;CDS_Target=comp118451_c0_seq1 341 126 .;locus=RLOC_00005323
Chr1	stalkie_big_nohaplotig	exon	5099879	5100271	100	-	.	Parent=comp118451_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5099931	5100146	.	-	0	Parent=comp118451_c0_seq1.mrna1
Chr1	gffcl	locus	5101152	5105908	.	+	.	ID=RLOC_00005324;geneIDs=comp153525_c0_seq1.path1;transcripts=comp153525_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5101152	5105908	.	+	.	ID=comp153525_c0_seq1.mrna1;geneID=comp153525_c0_seq1.path1;Name=comp153525_c0_seq1;Dir=sensecoverage=97.3;identity=99.6;matches=924;mismatches=4;indels=0;unknowns=0;Target=comp153525_c0_seq1 542 799 +;locus=RLOC_00005324
Chr1	stalkie_big_nohaplotig	exon	5101152	5101390	98	+	.	Parent=comp153525_c0_seq1.mrna1;Target=comp153525_c0_seq1 1 239 +
Chr1	stalkie_big_nohaplotig	exon	5105063	5105266	100	+	.	Parent=comp153525_c0_seq1.mrna1;Target=comp153525_c0_seq1 240 443 +
Chr1	stalkie_big_nohaplotig	exon	5105424	5105908	100	+	.	Parent=comp153525_c0_seq1.mrna1;Target=comp153525_c0_seq1 444 928 +
Chr1	stalkie_big_nohaplotig	CDS	5105522	5105779	.	+	0	Parent=comp153525_c0_seq1.mrna1
Chr1	gffcl	locus	5140807	5277869	.	+	.	ID=RLOC_00005325;geneIDs=comp149880_c0_seq1.path1;transcripts=comp149880_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5140807	5277869	.	+	.	ID=comp149880_c0_seq1.mrna1;geneID=comp149880_c0_seq1.path1;Name=comp149880_c0_seq1;Dir=indeterminatecoverage=85.2;identity=87.1;matches=986;mismatches=54;indels=92;unknowns=0;Target=comp149880_c0_seq1 67 2 .;locus=RLOC_00005325
Chr1	stalkie_big_nohaplotig	exon	5140807	5141589	99	+	.	Parent=comp149880_c0_seq1.mrna1;Target=comp149880_c0_seq1 778 1 .
Chr1	stalkie_big_nohaplotig	exon	5164028	5164037	80	+	.	Parent=comp149880_c0_seq1.mrna1;Target=comp149880_c0_seq1 788 779 .
Chr1	stalkie_big_nohaplotig	exon	5169794	5169801	100	+	.	Parent=comp149880_c0_seq1.mrna1;Target=comp149880_c0_seq1 796 789 .
Chr1	stalkie_big_nohaplotig	exon	5169828	5169835	100	+	.	Parent=comp149880_c0_seq1.mrna1;Target=comp149880_c0_seq1 853 846 .
Chr1	stalkie_big_nohaplotig	exon	5179296	5179305	90	+	.	Parent=comp149880_c0_seq1.mrna1;Target=comp149880_c0_seq1 863 854 .
Chr1	stalkie_big_nohaplotig	exon	5187004	5187009	12	+	.	Parent=comp149880_c0_seq1.mrna1;Target=comp149880_c0_seq1 912 864 .
Chr1	stalkie_big_nohaplotig	exon	5200015	5200021	100	+	.	Parent=comp149880_c0_seq1.mrna1;Target=comp149880_c0_seq1 919 913 .
Chr1	stalkie_big_nohaplotig	exon	5202301	5202306	100	+	.	Parent=comp149880_c0_seq1.mrna1;Target=comp149880_c0_seq1 925 920 .
Chr1	stalkie_big_nohaplotig	exon	5209428	5209438	100	+	.	Parent=comp149880_c0_seq1.mrna1;Target=comp149880_c0_seq1 936 926 .
Chr1	stalkie_big_nohaplotig	exon	5216447	5216449	100	+	.	Parent=comp149880_c0_seq1.mrna1;Target=comp149880_c0_seq1 939 937 .
Chr1	stalkie_big_nohaplotig	exon	5220076	5220084	100	+	.	Parent=comp149880_c0_seq1.mrna1;Target=comp149880_c0_seq1 948 940 .
Chr1	stalkie_big_nohaplotig	exon	5220604	5220664	46	+	.	Parent=comp149880_c0_seq1.mrna1;Target=comp149880_c0_seq1 1033 980 .
Chr1	stalkie_big_nohaplotig	exon	5225562	5225593	51	+	.	Parent=comp149880_c0_seq1.mrna1;Target=comp149880_c0_seq1 1059 1034 .
Chr1	stalkie_big_nohaplotig	exon	5239214	5239222	100	+	.	Parent=comp149880_c0_seq1.mrna1;Target=comp149880_c0_seq1 1068 1060 .
Chr1	stalkie_big_nohaplotig	exon	5268027	5268116	57	+	.	Parent=comp149880_c0_seq1.mrna1;Target=comp149880_c0_seq1 1169 1069 .
Chr1	stalkie_big_nohaplotig	exon	5272641	5272644	100	+	.	Parent=comp149880_c0_seq1.mrna1;Target=comp149880_c0_seq1 1173 1170 .
Chr1	stalkie_big_nohaplotig	exon	5277859	5277869	100	+	.	Parent=comp149880_c0_seq1.mrna1;Target=comp149880_c0_seq1 1184 1174 .
Chr1	stalkie_big_nohaplotig	CDS	5140808	5140873	.	+	0	Parent=comp149880_c0_seq1.mrna1
Chr1	gffcl	locus	5163483	7074871	.	+	.	ID=RLOC_00005326;geneIDs=comp49882_c0_seq1.path1,comp148292_c0_seq1.path1,comp159497_c1_seq1.path1;transcripts=comp159497_c1_seq1.mrna1,comp148292_c0_seq1.mrna1,comp49882_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5163483	7074871	.	+	.	ID=comp159497_c1_seq1.mrna1;geneID=comp159497_c1_seq1.path1;Name=comp159497_c1_seq1;Dir=antisensecoverage=94.8;identity=96.1;matches=1440;mismatches=36;indels=23;unknowns=0;Target=comp159497_c1_seq1 309 641 .;locus=RLOC_00005326
Chr1	stalkie_big_nohaplotig	exon	5163483	5163489	100	+	.	Parent=comp159497_c1_seq1.mrna1;Target=comp159497_c1_seq1 1511 1517 -
Chr1	stalkie_big_nohaplotig	exon	7066445	7066664	100	+	.	Parent=comp159497_c1_seq1.mrna1;Target=comp159497_c1_seq1 1291 1510 -
Chr1	stalkie_big_nohaplotig	exon	7066733	7066857	100	+	.	Parent=comp159497_c1_seq1.mrna1;Target=comp159497_c1_seq1 1166 1290 -
Chr1	stalkie_big_nohaplotig	exon	7066969	7067055	100	+	.	Parent=comp159497_c1_seq1.mrna1;Target=comp159497_c1_seq1 1079 1165 -
Chr1	stalkie_big_nohaplotig	exon	7069738	7070083	85	+	.	Parent=comp159497_c1_seq1.mrna1;Target=comp159497_c1_seq1 711 1078 -
Chr1	stalkie_big_nohaplotig	exon	7074181	7074871	99	+	.	Parent=comp159497_c1_seq1.mrna1;Target=comp159497_c1_seq1 19 710 -
Chr1	stalkie_big_nohaplotig	CDS	7074249	7074581	.	+	0	Parent=comp159497_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7067033	7067404	.	+	.	ID=comp148292_c0_seq1.mrna1;geneID=comp148292_c0_seq1.path1;Name=comp148292_c0_seq1;Dir=antisensecoverage=100.0;identity=95.5;matches=279;mismatches=13;indels=0;unknowns=0;locus=RLOC_00005326
Chr1	stalkie_big_nohaplotig	exon	7067033	7067055	100	+	.	Parent=comp148292_c0_seq1.mrna1;Target=comp148292_c0_seq1 270 292 -
Chr1	stalkie_big_nohaplotig	exon	7067136	7067404	95	+	.	Parent=comp148292_c0_seq1.mrna1;Target=comp148292_c0_seq1 1 269 -
Chr1	stalkie_big_nohaplotig	CDS	7067033	7067055	.	+	0	Parent=comp148292_c0_seq1.mrna1;Target=comp148292_c0_seq1 270 292 .
Chr1	stalkie_big_nohaplotig	CDS	7067136	7067265	.	+	1	Parent=comp148292_c0_seq1.mrna1;Target=comp148292_c0_seq1 140 269 .
Chr1	stalkie_big_nohaplotig	mRNA	7069501	7069761	.	+	.	ID=comp49882_c0_seq1.mrna1;geneID=comp49882_c0_seq1.path1;Name=comp49882_c0_seq1;Dir=antisensecoverage=95.8;identity=97.5;matches=198;mismatches=5;indels=0;unknowns=0;Target=comp49882_c0_seq1 165 203 .;locus=RLOC_00005326
Chr1	stalkie_big_nohaplotig	exon	7069501	7069679	97	+	.	Parent=comp49882_c0_seq1.mrna1;Target=comp49882_c0_seq1 25 203 -
Chr1	stalkie_big_nohaplotig	exon	7069738	7069761	100	+	.	Parent=comp49882_c0_seq1.mrna1;Target=comp49882_c0_seq1 1 24 -
Chr1	stalkie_big_nohaplotig	CDS	7069501	7069539	.	+	0	Parent=comp49882_c0_seq1.mrna1
Chr1	gffcl	locus	5171134	5171591	.	-	.	ID=RLOC_00005327;geneIDs=comp114855_c0_seq1.path1;transcripts=comp114855_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5171134	5171591	.	-	.	ID=comp114855_c0_seq1.mrna1;geneID=comp114855_c0_seq1.path1;Name=comp114855_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=457;mismatches=1;indels=0;unknowns=0;Target=comp114855_c0_seq1 458 1 .;CDS_Target=comp114855_c0_seq1 406 305 .;locus=RLOC_00005327
Chr1	stalkie_big_nohaplotig	exon	5171134	5171591	99	-	.	Parent=comp114855_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5171186	5171287	.	-	0	Parent=comp114855_c0_seq1.mrna1
Chr1	gffcl	locus	5173553	5259032	.	.	.	ID=RLOC_00005328;geneIDs=FBgn0261259.1.path1,comp143598_c0_seq1.path1,comp159500_c0_seq1.path1;transcripts=FBgn0261259.1.mrna1,comp159500_c0_seq1.mrna1,comp143598_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5173553	5259032	.	+	.	ID=FBgn0261259.1.mrna1;geneID=FBgn0261259.1.path1;Name=FBgn0261259.1;Dir=sensecoverage=100.0;identity=100.0;matches=3483;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005328
Chr1	stalkie_big_nohaplotig	exon	5173553	5173822	100	+	.	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 1 270 +
Chr1	stalkie_big_nohaplotig	exon	5197408	5197517	100	+	.	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 271 380 +
Chr1	stalkie_big_nohaplotig	exon	5205775	5205833	100	+	.	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 381 439 +
Chr1	stalkie_big_nohaplotig	exon	5209941	5210125	100	+	.	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 440 624 +
Chr1	stalkie_big_nohaplotig	exon	5210328	5210551	100	+	.	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 625 848 +
Chr1	stalkie_big_nohaplotig	exon	5210897	5211118	100	+	.	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 849 1070 +
Chr1	stalkie_big_nohaplotig	exon	5213056	5213297	100	+	.	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 1071 1312 +
Chr1	stalkie_big_nohaplotig	exon	5239004	5239138	100	+	.	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 1313 1447 +
Chr1	stalkie_big_nohaplotig	exon	5240627	5240819	100	+	.	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 1448 1640 +
Chr1	stalkie_big_nohaplotig	exon	5249166	5249505	100	+	.	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 1641 1980 +
Chr1	stalkie_big_nohaplotig	exon	5250997	5251143	100	+	.	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 1981 2127 +
Chr1	stalkie_big_nohaplotig	exon	5251612	5251614	100	+	.	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 2128 2130 +
Chr1	stalkie_big_nohaplotig	exon	5253268	5253483	100	+	.	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 2131 2346 +
Chr1	stalkie_big_nohaplotig	exon	5253560	5253682	100	+	.	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 2347 2469 +
Chr1	stalkie_big_nohaplotig	exon	5253754	5253909	100	+	.	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 2470 2625 +
Chr1	stalkie_big_nohaplotig	exon	5255100	5255419	100	+	.	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 2626 2945 +
Chr1	stalkie_big_nohaplotig	exon	5255483	5255722	100	+	.	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 2946 3185 +
Chr1	stalkie_big_nohaplotig	exon	5255784	5256010	100	+	.	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 3186 3412 +
Chr1	stalkie_big_nohaplotig	exon	5258962	5259032	100	+	.	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 3413 3483 +
Chr1	stalkie_big_nohaplotig	CDS	5173553	5173822	.	+	0	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 1 270 +
Chr1	stalkie_big_nohaplotig	CDS	5197408	5197517	.	+	0	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 271 380 +
Chr1	stalkie_big_nohaplotig	CDS	5205775	5205833	.	+	1	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 381 439 +
Chr1	stalkie_big_nohaplotig	CDS	5209941	5210125	.	+	2	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 440 624 +
Chr1	stalkie_big_nohaplotig	CDS	5210328	5210551	.	+	0	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 625 848 +
Chr1	stalkie_big_nohaplotig	CDS	5210897	5211118	.	+	1	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 849 1070 +
Chr1	stalkie_big_nohaplotig	CDS	5213056	5213297	.	+	1	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 1071 1312 +
Chr1	stalkie_big_nohaplotig	CDS	5239004	5239138	.	+	2	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 1313 1447 +
Chr1	stalkie_big_nohaplotig	CDS	5240627	5240819	.	+	2	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 1448 1640 +
Chr1	stalkie_big_nohaplotig	CDS	5249166	5249505	.	+	1	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 1641 1980 +
Chr1	stalkie_big_nohaplotig	CDS	5250997	5251143	.	+	0	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 1981 2127 +
Chr1	stalkie_big_nohaplotig	CDS	5251612	5251614	.	+	0	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 2128 2130 +
Chr1	stalkie_big_nohaplotig	CDS	5253268	5253483	.	+	0	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 2131 2346 +
Chr1	stalkie_big_nohaplotig	CDS	5253560	5253682	.	+	0	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 2347 2469 +
Chr1	stalkie_big_nohaplotig	CDS	5253754	5253909	.	+	0	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 2470 2625 +
Chr1	stalkie_big_nohaplotig	CDS	5255100	5255419	.	+	0	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 2626 2945 +
Chr1	stalkie_big_nohaplotig	CDS	5255483	5255722	.	+	1	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 2946 3185 +
Chr1	stalkie_big_nohaplotig	CDS	5255784	5256010	.	+	1	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 3186 3412 +
Chr1	stalkie_big_nohaplotig	CDS	5258962	5259032	.	+	2	Parent=FBgn0261259.1.mrna1;Target=FBgn0261259.1 3413 3483 +
Chr1	stalkie_big_nohaplotig	mRNA	5251123	5253288	.	+	.	ID=comp159500_c0_seq1.mrna1;geneID=comp159500_c0_seq1.path1;Name=comp159500_c0_seq1;Dir=antisensecoverage=100.0;identity=94.9;matches=1671;mismatches=23;indels=67;unknowns=0;Target=comp159500_c0_seq1 73 327 .;locus=RLOC_00005328
Chr1	stalkie_big_nohaplotig	exon	5251123	5251143	100	+	.	Parent=comp159500_c0_seq1.mrna1;Target=comp159500_c0_seq1 1737 1757 -
Chr1	stalkie_big_nohaplotig	exon	5251612	5253288	94	+	.	Parent=comp159500_c0_seq1.mrna1;Target=comp159500_c0_seq1 1 1736 -
Chr1	stalkie_big_nohaplotig	CDS	5252962	5253216	.	+	0	Parent=comp159500_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5255988	5256541	.	-	.	ID=comp143598_c0_seq1.mrna1;geneID=comp143598_c0_seq1.path1;Name=comp143598_c0_seq1;Dir=indeterminatecoverage=97.7;identity=100.0;matches=554;mismatches=0;indels=0;unknowns=0;Target=comp143598_c0_seq1 567 14 .;CDS_Target=comp143598_c0_seq1 426 307 .;locus=RLOC_00005328
Chr1	stalkie_big_nohaplotig	exon	5255988	5256541	100	-	.	Parent=comp143598_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5256129	5256248	.	-	0	Parent=comp143598_c0_seq1.mrna1
Chr1	gffcl	locus	5177113	5177429	.	-	.	ID=RLOC_00005329;geneIDs=comp3147675_c0_seq1.path1;transcripts=comp3147675_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5177113	5177429	.	-	.	ID=comp3147675_c0_seq1.mrna1;geneID=comp3147675_c0_seq1.path1;Name=comp3147675_c0_seq1;Dir=indeterminatecoverage=98.1;identity=96.8;matches=307;mismatches=10;indels=0;unknowns=0;Target=comp3147675_c0_seq1 317 1 .;CDS_Target=comp3147675_c0_seq1 275 3 .;locus=RLOC_00005329
Chr1	stalkie_big_nohaplotig	exon	5177113	5177429	96	-	.	Parent=comp3147675_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5177155	5177427	.	-	0	Parent=comp3147675_c0_seq1.mrna1
Chr1	gffcl	locus	5197758	5198537	.	-	.	ID=RLOC_00005330;geneIDs=comp62619_c0_seq1.path1;transcripts=comp62619_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5197758	5198537	.	-	.	ID=comp62619_c0_seq1.mrna1;geneID=comp62619_c0_seq1.path1;Name=comp62619_c0_seq1;Dir=antisensecoverage=97.9;identity=100.0;matches=668;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005330
Chr1	stalkie_big_nohaplotig	exon	5197758	5198059	100	-	.	Parent=comp62619_c0_seq1.mrna1;Target=comp62619_c0_seq1 15 316 -
Chr1	stalkie_big_nohaplotig	exon	5198172	5198537	100	-	.	Parent=comp62619_c0_seq1.mrna1;Target=comp62619_c0_seq1 317 682 -
Chr1	stalkie_big_nohaplotig	CDS	5197946	5198059	.	-	0	Parent=comp62619_c0_seq1.mrna1;Target=comp62619_c0_seq1 203 316 .
Chr1	stalkie_big_nohaplotig	CDS	5198172	5198342	.	-	0	Parent=comp62619_c0_seq1.mrna1;Target=comp62619_c0_seq1 317 487 .
Chr1	gffcl	locus	5213709	5213809	.	-	.	ID=RLOC_00005331;geneIDs=comp46245_c0_seq1.path1;transcripts=comp46245_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5213709	5213809	.	-	.	ID=comp46245_c0_seq1.mrna1;geneID=comp46245_c0_seq1.path1;Name=comp46245_c0_seq1;Dir=indeterminatecoverage=26.0;identity=100.0;matches=101;mismatches=0;indels=0;unknowns=0;Target=comp46245_c0_seq1 101 1 .;CDS_Target=comp46245_c0_seq1 101 3 .;locus=RLOC_00005331
Chr1	stalkie_big_nohaplotig	exon	5213709	5213809	100	-	.	Parent=comp46245_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5213709	5213807	.	-	0	Parent=comp46245_c0_seq1.mrna1
Chr1	gffcl	locus	5216578	5216938	.	-	.	ID=RLOC_00005332;geneIDs=FBgn0035742.2.path1;transcripts=FBgn0035742.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5216578	5216938	.	-	.	ID=FBgn0035742.2.mrna1;geneID=FBgn0035742.2.path1;Name=FBgn0035742.2;Dir=sensecoverage=100.0;identity=99.6;matches=275;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005332
Chr1	stalkie_big_nohaplotig	exon	5216578	5216820	99	-	.	Parent=FBgn0035742.2.mrna1;Target=FBgn0035742.2 34 276 +
Chr1	stalkie_big_nohaplotig	exon	5216906	5216938	100	-	.	Parent=FBgn0035742.2.mrna1;Target=FBgn0035742.2 1 33 +
Chr1	stalkie_big_nohaplotig	CDS	5216578	5216820	.	-	0	Parent=FBgn0035742.2.mrna1;Target=FBgn0035742.2 34 276 +
Chr1	stalkie_big_nohaplotig	CDS	5216906	5216938	.	-	0	Parent=FBgn0035742.2.mrna1;Target=FBgn0035742.2 1 33 +
Chr1	gffcl	locus	5223227	5223438	.	-	.	ID=RLOC_00005333;geneIDs=comp62354_c0_seq1.path2;transcripts=comp62354_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	5223227	5223438	.	-	.	ID=comp62354_c0_seq1.mrna2;geneID=comp62354_c0_seq1.path2;Name=comp62354_c0_seq1;Dir=indeterminatecoverage=87.2;identity=96.7;matches=205;mismatches=7;indels=0;unknowns=0;Target=comp62354_c0_seq1 212 1 .;CDS_Target=comp62354_c0_seq1 212 3 .;locus=RLOC_00005333
Chr1	stalkie_big_nohaplotig	exon	5223227	5223438	96	-	.	Parent=comp62354_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	5223227	5223436	.	-	0	Parent=comp62354_c0_seq1.mrna2
Chr1	gffcl	locus	5231705	5232337	.	+	.	ID=RLOC_00005334;geneIDs=FBgn0036546.2.path1;transcripts=FBgn0036546.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5231705	5232337	.	+	.	ID=FBgn0036546.2.mrna1;geneID=FBgn0036546.2.path1;Name=FBgn0036546.2;Dir=indeterminatecoverage=98.6;identity=99.8;matches=632;mismatches=1;indels=0;unknowns=0;Target=FBgn0036546.2 642 10 .;locus=RLOC_00005334
Chr1	stalkie_big_nohaplotig	exon	5231705	5232337	99	+	.	Parent=FBgn0036546.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5231705	5232337	.	+	0	Parent=FBgn0036546.2.mrna1
Chr1	gffcl	locus	5243324	5243693	.	-	.	ID=RLOC_00005335;geneIDs=FBgn0035742.3.path1;transcripts=FBgn0035742.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5243324	5243693	.	-	.	ID=FBgn0035742.3.mrna1;geneID=FBgn0035742.3.path1;Name=FBgn0035742.3;Dir=sensecoverage=100.0;identity=100.0;matches=288;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005335
Chr1	stalkie_big_nohaplotig	exon	5243324	5243566	100	-	.	Parent=FBgn0035742.3.mrna1;Target=FBgn0035742.3 46 288 +
Chr1	stalkie_big_nohaplotig	exon	5243649	5243693	100	-	.	Parent=FBgn0035742.3.mrna1;Target=FBgn0035742.3 1 45 +
Chr1	stalkie_big_nohaplotig	CDS	5243324	5243566	.	-	0	Parent=FBgn0035742.3.mrna1;Target=FBgn0035742.3 46 288 +
Chr1	stalkie_big_nohaplotig	CDS	5243649	5243693	.	-	0	Parent=FBgn0035742.3.mrna1;Target=FBgn0035742.3 1 45 +
Chr1	gffcl	locus	5248140	5248985	.	-	.	ID=RLOC_00005336;geneIDs=Dv_FBgn0199548.1.path1;transcripts=Dv_FBgn0199548.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5248140	5248985	.	-	.	ID=Dv_FBgn0199548.1.mrna1;geneID=Dv_FBgn0199548.1.path1;Name=Dv_FBgn0199548.1;Dir=sensecoverage=100.0;identity=100.0;matches=366;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005336
Chr1	stalkie_big_nohaplotig	exon	5248140	5248382	100	-	.	Parent=Dv_FBgn0199548.1.mrna1;Target=Dv_FBgn0199548.1 124 366 +
Chr1	stalkie_big_nohaplotig	exon	5248485	5248529	100	-	.	Parent=Dv_FBgn0199548.1.mrna1;Target=Dv_FBgn0199548.1 79 123 +
Chr1	stalkie_big_nohaplotig	exon	5248908	5248985	100	-	.	Parent=Dv_FBgn0199548.1.mrna1;Target=Dv_FBgn0199548.1 1 78 +
Chr1	stalkie_big_nohaplotig	CDS	5248140	5248382	.	-	0	Parent=Dv_FBgn0199548.1.mrna1;Target=Dv_FBgn0199548.1 124 366 +
Chr1	stalkie_big_nohaplotig	CDS	5248485	5248529	.	-	0	Parent=Dv_FBgn0199548.1.mrna1;Target=Dv_FBgn0199548.1 79 123 +
Chr1	stalkie_big_nohaplotig	CDS	5248908	5248985	.	-	0	Parent=Dv_FBgn0199548.1.mrna1;Target=Dv_FBgn0199548.1 1 78 +
Chr1	gffcl	locus	5256796	5258595	.	-	.	ID=RLOC_00005337;geneIDs=comp157606_c0_seq1.path1;transcripts=comp157606_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5256796	5258595	.	-	.	ID=comp157606_c0_seq1.mrna1;geneID=comp157606_c0_seq1.path1;Name=comp157606_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.8;matches=1763;mismatches=33;indels=26;unknowns=0;Target=comp157606_c0_seq1 1818 1 .;CDS_Target=comp157606_c0_seq1 962 777 .;locus=RLOC_00005337
Chr1	stalkie_big_nohaplotig	exon	5256796	5258595	96	-	.	Parent=comp157606_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5257650	5257835	.	-	0	Parent=comp157606_c0_seq1.mrna1
Chr1	gffcl	locus	5268097	5268734	.	-	.	ID=RLOC_00005338;geneIDs=comp135028_c0_seq1.path2;transcripts=comp135028_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	5268097	5268734	.	-	.	ID=comp135028_c0_seq1.mrna2;geneID=comp135028_c0_seq1.path2;Name=comp135028_c0_seq1;Dir=sensecoverage=96.1;identity=99.8;matches=560;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005338
Chr1	stalkie_big_nohaplotig	exon	5268097	5268547	99	-	.	Parent=comp135028_c0_seq1.mrna2;Target=comp135028_c0_seq1 111 561 +
Chr1	stalkie_big_nohaplotig	exon	5268625	5268734	100	-	.	Parent=comp135028_c0_seq1.mrna2;Target=comp135028_c0_seq1 1 110 +
Chr1	stalkie_big_nohaplotig	CDS	5268119	5268547	.	-	0	Parent=comp135028_c0_seq1.mrna2;Target=comp135028_c0_seq1 111 539 +
Chr1	stalkie_big_nohaplotig	CDS	5268625	5268651	.	-	0	Parent=comp135028_c0_seq1.mrna2;Target=comp135028_c0_seq1 84 110 +
Chr1	gffcl	locus	5302071	5302513	.	+	.	ID=RLOC_00005339;geneIDs=comp115518_c1_seq1.path1;transcripts=comp115518_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5302071	5302513	.	+	.	ID=comp115518_c1_seq1.mrna1;geneID=comp115518_c1_seq1.path1;Name=comp115518_c1_seq1;Dir=indeterminatecoverage=98.0;identity=100.0;matches=443;mismatches=0;indels=0;unknowns=0;Target=comp115518_c1_seq1 452 10 .;CDS_Target=comp115518_c1_seq1 405 316 .;locus=RLOC_00005339
Chr1	stalkie_big_nohaplotig	exon	5302071	5302513	100	+	.	Parent=comp115518_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5302377	5302466	.	+	0	Parent=comp115518_c1_seq1.mrna1
Chr1	gffcl	locus	5304677	5305264	.	-	.	ID=RLOC_00005340;geneIDs=comp147546_c0_seq1.path1;transcripts=comp147546_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5304677	5305264	.	-	.	ID=comp147546_c0_seq1.mrna1;geneID=comp147546_c0_seq1.path1;Name=comp147546_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.7;matches=586;mismatches=2;indels=0;unknowns=0;Target=comp147546_c0_seq1 594 7 .;CDS_Target=comp147546_c0_seq1 417 124 .;locus=RLOC_00005340
Chr1	stalkie_big_nohaplotig	exon	5304677	5305264	99	-	.	Parent=comp147546_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5304854	5305147	.	-	0	Parent=comp147546_c0_seq1.mrna1
Chr1	gffcl	locus	5354624	5356489	.	+	.	ID=RLOC_00005341;geneIDs=ORF416.path1;transcripts=ORF416.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5354624	5356489	.	+	.	ID=ORF416.mrna1;geneID=ORF416.path1;Name=ORF416;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1865;mismatches=1;indels=3;unknowns=0;Target=ORF416 1869 1 .;locus=RLOC_00005341
Chr1	stalkie_big_nohaplotig	exon	5354624	5356489	99	+	.	Parent=ORF416.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5354624	5356489	.	+	0	Parent=ORF416.mrna1
Chr1	gffcl	locus	5471539	5473737	.	+	.	ID=RLOC_00005342;geneIDs=FBgn0261387.9.path1;transcripts=FBgn0261387.9.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5471539	5473737	.	+	.	ID=FBgn0261387.9.mrna1;geneID=FBgn0261387.9.path1;Name=FBgn0261387.9;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2196;mismatches=3;indels=0;unknowns=0;Target=FBgn0261387.9 2199 1 .;locus=RLOC_00005342
Chr1	stalkie_big_nohaplotig	exon	5471539	5473737	99	+	.	Parent=FBgn0261387.9.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5471539	5473737	.	+	0	Parent=FBgn0261387.9.mrna1
Chr1	gffcl	locus	5476657	5477640	.	+	.	ID=RLOC_00005343;geneIDs=FBgn0035932.1.path1;transcripts=FBgn0035932.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5476657	5477640	.	+	.	ID=FBgn0035932.1.mrna1;geneID=FBgn0035932.1.path1;Name=FBgn0035932.1;Dir=sensecoverage=100.0;identity=99.0;matches=784;mismatches=5;indels=3;unknowns=0;locus=RLOC_00005343
Chr1	stalkie_big_nohaplotig	exon	5476657	5476698	91	+	.	Parent=FBgn0035932.1.mrna1;Target=FBgn0035932.1 1 45 +
Chr1	stalkie_big_nohaplotig	exon	5476752	5477144	99	+	.	Parent=FBgn0035932.1.mrna1;Target=FBgn0035932.1 46 438 +
Chr1	stalkie_big_nohaplotig	exon	5477222	5477403	98	+	.	Parent=FBgn0035932.1.mrna1;Target=FBgn0035932.1 439 620 +
Chr1	stalkie_big_nohaplotig	exon	5477469	5477640	100	+	.	Parent=FBgn0035932.1.mrna1;Target=FBgn0035932.1 621 792 +
Chr1	stalkie_big_nohaplotig	CDS	5476657	5476698	.	+	0	Parent=FBgn0035932.1.mrna1;Target=FBgn0035932.1 1 45 +
Chr1	stalkie_big_nohaplotig	CDS	5476752	5477144	.	+	0	Parent=FBgn0035932.1.mrna1;Target=FBgn0035932.1 46 438 +
Chr1	stalkie_big_nohaplotig	CDS	5477222	5477403	.	+	0	Parent=FBgn0035932.1.mrna1;Target=FBgn0035932.1 439 620 +
Chr1	stalkie_big_nohaplotig	CDS	5477469	5477640	.	+	1	Parent=FBgn0035932.1.mrna1;Target=FBgn0035932.1 621 792 +
Chr1	gffcl	locus	5479504	5480921	.	-	.	ID=RLOC_00005344;geneIDs=FBgn0085456.1.path1;transcripts=FBgn0085456.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5479504	5480921	.	-	.	ID=FBgn0085456.1.mrna1;geneID=FBgn0085456.1.path1;Name=FBgn0085456.1;Dir=sensecoverage=100.0;identity=100.0;matches=777;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005344
Chr1	stalkie_big_nohaplotig	exon	5479504	5479612	100	-	.	Parent=FBgn0085456.1.mrna1;Target=FBgn0085456.1 669 777 +
Chr1	stalkie_big_nohaplotig	exon	5479680	5480166	100	-	.	Parent=FBgn0085456.1.mrna1;Target=FBgn0085456.1 182 668 +
Chr1	stalkie_big_nohaplotig	exon	5480226	5480337	100	-	.	Parent=FBgn0085456.1.mrna1;Target=FBgn0085456.1 70 181 +
Chr1	stalkie_big_nohaplotig	exon	5480853	5480921	100	-	.	Parent=FBgn0085456.1.mrna1;Target=FBgn0085456.1 1 69 +
Chr1	stalkie_big_nohaplotig	CDS	5479504	5479612	.	-	1	Parent=FBgn0085456.1.mrna1;Target=FBgn0085456.1 669 777 +
Chr1	stalkie_big_nohaplotig	CDS	5479680	5480166	.	-	2	Parent=FBgn0085456.1.mrna1;Target=FBgn0085456.1 182 668 +
Chr1	stalkie_big_nohaplotig	CDS	5480226	5480337	.	-	0	Parent=FBgn0085456.1.mrna1;Target=FBgn0085456.1 70 181 +
Chr1	stalkie_big_nohaplotig	CDS	5480853	5480921	.	-	0	Parent=FBgn0085456.1.mrna1;Target=FBgn0085456.1 1 69 +
Chr1	gffcl	locus	5483540	5484212	.	-	.	ID=RLOC_00005345;geneIDs=comp144702_c0_seq1.path1;transcripts=comp144702_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5483540	5484212	.	-	.	ID=comp144702_c0_seq1.mrna1;geneID=comp144702_c0_seq1.path1;Name=comp144702_c0_seq1;Dir=antisensecoverage=99.8;identity=99.2;matches=522;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005345
Chr1	stalkie_big_nohaplotig	exon	5483540	5483919	99	-	.	Parent=comp144702_c0_seq1.mrna1;Target=comp144702_c0_seq1 2 381 -
Chr1	stalkie_big_nohaplotig	exon	5483987	5484108	98	-	.	Parent=comp144702_c0_seq1.mrna1;Target=comp144702_c0_seq1 382 503 -
Chr1	stalkie_big_nohaplotig	exon	5484189	5484212	100	-	.	Parent=comp144702_c0_seq1.mrna1;Target=comp144702_c0_seq1 504 527 -
Chr1	stalkie_big_nohaplotig	CDS	5483621	5483919	.	-	2	Parent=comp144702_c0_seq1.mrna1;Target=comp144702_c0_seq1 83 381 .
Chr1	stalkie_big_nohaplotig	CDS	5483987	5484108	.	-	1	Parent=comp144702_c0_seq1.mrna1;Target=comp144702_c0_seq1 382 503 .
Chr1	stalkie_big_nohaplotig	CDS	5484189	5484211	.	-	0	Parent=comp144702_c0_seq1.mrna1;Target=comp144702_c0_seq1 504 526 .
Chr1	gffcl	locus	5484274	5486547	.	-	.	ID=RLOC_00005346;geneIDs=comp138832_c0_seq1.path1;transcripts=comp138832_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5484274	5486547	.	-	.	ID=comp138832_c0_seq1.mrna1;geneID=comp138832_c0_seq1.path1;Name=comp138832_c0_seq1;Dir=sensecoverage=99.9;identity=98.9;matches=1072;mismatches=12;indels=0;unknowns=0;Target=comp138832_c0_seq1 3 296 +;locus=RLOC_00005346
Chr1	stalkie_big_nohaplotig	exon	5484274	5484365	92	-	.	Parent=comp138832_c0_seq1.mrna1;Target=comp138832_c0_seq1 993 1084 +
Chr1	stalkie_big_nohaplotig	exon	5485365	5485551	99	-	.	Parent=comp138832_c0_seq1.mrna1;Target=comp138832_c0_seq1 806 992 +
Chr1	stalkie_big_nohaplotig	exon	5485620	5485957	98	-	.	Parent=comp138832_c0_seq1.mrna1;Target=comp138832_c0_seq1 468 805 +
Chr1	stalkie_big_nohaplotig	exon	5486017	5486081	100	-	.	Parent=comp138832_c0_seq1.mrna1;Target=comp138832_c0_seq1 403 467 +
Chr1	stalkie_big_nohaplotig	exon	5486146	5486547	100	-	.	Parent=comp138832_c0_seq1.mrna1;Target=comp138832_c0_seq1 1 402 +
Chr1	stalkie_big_nohaplotig	CDS	5486252	5486545	.	-	0	Parent=comp138832_c0_seq1.mrna1
Chr1	gffcl	locus	5487853	5492530	.	-	.	ID=RLOC_00005347;geneIDs=comp135399_c1_seq1.path1,comp139339_c1_seq1.path1,comp161177_c0_seq1.path1;transcripts=comp161177_c0_seq1.mrna1,comp135399_c1_seq1.mrna1,comp139339_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5487853	5492530	.	-	.	ID=comp161177_c0_seq1.mrna1;geneID=comp161177_c0_seq1.path1;Name=comp161177_c0_seq1;Dir=indeterminatecoverage=75.9;identity=91.8;matches=1810;mismatches=145;indels=16;unknowns=0;locus=RLOC_00005347
Chr1	stalkie_big_nohaplotig	exon	5487853	5488278	99	-	.	Parent=comp161177_c0_seq1.mrna1;Target=comp161177_c0_seq1 2596 2171 .
Chr1	stalkie_big_nohaplotig	exon	5488349	5488463	100	-	.	Parent=comp161177_c0_seq1.mrna1;Target=comp161177_c0_seq1 2170 2056 .
Chr1	stalkie_big_nohaplotig	exon	5491040	5491363	92	-	.	Parent=comp161177_c0_seq1.mrna1;Target=comp161177_c0_seq1 2055 1718 .
Chr1	stalkie_big_nohaplotig	exon	5491440	5492530	87	-	.	Parent=comp161177_c0_seq1.mrna1;Target=comp161177_c0_seq1 1717 627 .
Chr1	stalkie_big_nohaplotig	CDS	5487854	5488278	.	-	2	Parent=comp161177_c0_seq1.mrna1;Target=comp161177_c0_seq1 2595 2171 .
Chr1	stalkie_big_nohaplotig	CDS	5488349	5488457	.	-	0	Parent=comp161177_c0_seq1.mrna1;Target=comp161177_c0_seq1 2170 2062 .
Chr1	stalkie_big_nohaplotig	mRNA	5488440	5488938	.	-	.	ID=comp135399_c1_seq1.mrna1;geneID=comp135399_c1_seq1.path1;Name=comp135399_c1_seq1;Dir=sensecoverage=85.3;identity=96.7;matches=381;mismatches=12;indels=1;unknowns=0;Target=comp135399_c1_seq1 71 136 +;locus=RLOC_00005347
Chr1	stalkie_big_nohaplotig	exon	5488440	5488463	100	-	.	Parent=comp135399_c1_seq1.mrna1;Target=comp135399_c1_seq1 439 462 +
Chr1	stalkie_big_nohaplotig	exon	5488570	5488938	96	-	.	Parent=comp135399_c1_seq1.mrna1;Target=comp135399_c1_seq1 69 438 +
Chr1	stalkie_big_nohaplotig	CDS	5488872	5488936	.	-	0	Parent=comp135399_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5490485	5491065	.	-	.	ID=comp139339_c1_seq1.mrna1;geneID=comp139339_c1_seq1.path1;Name=comp139339_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=581;mismatches=0;indels=0;unknowns=0;Target=comp139339_c1_seq1 581 1 .;CDS_Target=comp139339_c1_seq1 332 249 .;locus=RLOC_00005347
Chr1	stalkie_big_nohaplotig	exon	5490485	5491065	100	-	.	Parent=comp139339_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5490734	5490817	.	-	0	Parent=comp139339_c1_seq1.mrna1
Chr1	gffcl	locus	5491265	5508347	.	+	.	ID=RLOC_00005348;geneIDs=FBgn0035929.1.path1;transcripts=FBgn0035929.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5491265	5508347	.	+	.	ID=FBgn0035929.1.mrna1;geneID=FBgn0035929.1.path1;Name=FBgn0035929.1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=593;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005348
Chr1	stalkie_big_nohaplotig	exon	5491265	5491363	100	+	.	Parent=FBgn0035929.1.mrna1;Target=FBgn0035929.1 99 1 .
Chr1	stalkie_big_nohaplotig	exon	5491440	5491870	100	+	.	Parent=FBgn0035929.1.mrna1;Target=FBgn0035929.1 530 100 .
Chr1	stalkie_big_nohaplotig	exon	5508285	5508347	100	+	.	Parent=FBgn0035929.1.mrna1;Target=FBgn0035929.1 593 531 .
Chr1	stalkie_big_nohaplotig	CDS	5491265	5491363	.	+	0	Parent=FBgn0035929.1.mrna1;Target=FBgn0035929.1 99 1 .
Chr1	stalkie_big_nohaplotig	CDS	5491440	5491870	.	+	0	Parent=FBgn0035929.1.mrna1;Target=FBgn0035929.1 530 100 .
Chr1	stalkie_big_nohaplotig	CDS	5508285	5508345	.	+	1	Parent=FBgn0035929.1.mrna1;Target=FBgn0035929.1 591 531 .
Chr1	gffcl	locus	5494811	5495446	.	-	.	ID=RLOC_00005349;geneIDs=FBgn0036546.2.path2;transcripts=FBgn0036546.2.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	5494811	5495446	.	-	.	ID=FBgn0036546.2.mrna2;geneID=FBgn0036546.2.path2;Name=FBgn0036546.2;Dir=indeterminatecoverage=99.1;identity=99.7;matches=634;mismatches=2;indels=0;unknowns=0;Target=FBgn0036546.2 642 7 .;locus=RLOC_00005349
Chr1	stalkie_big_nohaplotig	exon	5494811	5495446	99	-	.	Parent=FBgn0036546.2.mrna2
Chr1	stalkie_big_nohaplotig	CDS	5494811	5495446	.	-	0	Parent=FBgn0036546.2.mrna2
Chr1	gffcl	locus	5498645	5499291	.	+	.	ID=RLOC_00005350;geneIDs=comp135028_c0_seq1.path1;transcripts=comp135028_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5498645	5499291	.	+	.	ID=comp135028_c0_seq1.mrna1;geneID=comp135028_c0_seq1.path1;Name=comp135028_c0_seq1;Dir=sensecoverage=97.6;identity=100.0;matches=570;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005350
Chr1	stalkie_big_nohaplotig	exon	5498645	5498754	100	+	.	Parent=comp135028_c0_seq1.mrna1;Target=comp135028_c0_seq1 1 110 +
Chr1	stalkie_big_nohaplotig	exon	5498832	5499291	100	+	.	Parent=comp135028_c0_seq1.mrna1;Target=comp135028_c0_seq1 111 570 +
Chr1	stalkie_big_nohaplotig	CDS	5498728	5498754	.	+	0	Parent=comp135028_c0_seq1.mrna1;Target=comp135028_c0_seq1 84 110 +
Chr1	stalkie_big_nohaplotig	CDS	5498832	5499260	.	+	0	Parent=comp135028_c0_seq1.mrna1;Target=comp135028_c0_seq1 111 539 +
Chr1	gffcl	locus	5502934	5503176	.	+	.	ID=RLOC_00005351;geneIDs=comp62354_c0_seq1.path1;transcripts=comp62354_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5502934	5503176	.	+	.	ID=comp62354_c0_seq1.mrna1;geneID=comp62354_c0_seq1.path1;Name=comp62354_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=242;mismatches=1;indels=0;unknowns=0;Target=comp62354_c0_seq1 243 1 .;locus=RLOC_00005351
Chr1	stalkie_big_nohaplotig	exon	5502934	5503176	99	+	.	Parent=comp62354_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5502934	5503176	.	+	0	Parent=comp62354_c0_seq1.mrna1
Chr1	gffcl	locus	5508546	5509340	.	-	.	ID=RLOC_00005352;geneIDs=FBgn0052371.4.path1;transcripts=FBgn0052371.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5508546	5509340	.	-	.	ID=FBgn0052371.4.mrna1;geneID=FBgn0052371.4.path1;Name=FBgn0052371.4;Dir=indeterminatecoverage=100.0;identity=99.9;matches=794;mismatches=1;indels=0;unknowns=0;Target=FBgn0052371.4 795 1 .;locus=RLOC_00005352
Chr1	stalkie_big_nohaplotig	exon	5508546	5509340	99	-	.	Parent=FBgn0052371.4.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5508546	5509340	.	-	0	Parent=FBgn0052371.4.mrna1
Chr1	gffcl	locus	5538206	5538951	.	-	.	ID=RLOC_00005354;geneIDs=comp135184_c0_seq1.path1;transcripts=comp135184_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5538206	5538951	.	-	.	ID=comp135184_c0_seq1.mrna1;geneID=comp135184_c0_seq1.path1;Name=comp135184_c0_seq1;Dir=indeterminatecoverage=98.8;identity=100.0;matches=746;mismatches=0;indels=0;unknowns=0;Target=comp135184_c0_seq1 746 1 .;CDS_Target=comp135184_c0_seq1 284 138 .;locus=RLOC_00005354
Chr1	stalkie_big_nohaplotig	exon	5538206	5538951	100	-	.	Parent=comp135184_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5538668	5538814	.	-	0	Parent=comp135184_c0_seq1.mrna1
Chr1	gffcl	locus	5539256	5540129	.	+	.	ID=RLOC_00005355;geneIDs=comp117229_c0_seq1.path1;transcripts=comp117229_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5539256	5540129	.	+	.	ID=comp117229_c0_seq1.mrna1;geneID=comp117229_c0_seq1.path1;Name=comp117229_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.3;matches=868;mismatches=0;indels=6;unknowns=0;Target=comp117229_c0_seq1 883 16 .;CDS_Target=comp117229_c0_seq1 577 464 .;locus=RLOC_00005355
Chr1	stalkie_big_nohaplotig	exon	5539256	5540129	99	+	.	Parent=comp117229_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5539704	5539823	.	+	0	Parent=comp117229_c0_seq1.mrna1
Chr1	gffcl	locus	5542325	5544784	.	+	.	ID=RLOC_00005356;geneIDs=FBgn0020633.1.path1;transcripts=FBgn0020633.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5542325	5544784	.	+	.	ID=FBgn0020633.1.mrna1;geneID=FBgn0020633.1.path1;Name=FBgn0020633.1;Dir=sensecoverage=100.0;identity=100.0;matches=2177;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005356
Chr1	stalkie_big_nohaplotig	exon	5542325	5542376	100	+	.	Parent=FBgn0020633.1.mrna1;Target=FBgn0020633.1 1 52 +
Chr1	stalkie_big_nohaplotig	exon	5542470	5542836	99	+	.	Parent=FBgn0020633.1.mrna1;Target=FBgn0020633.1 53 419 +
Chr1	stalkie_big_nohaplotig	exon	5542905	5543406	100	+	.	Parent=FBgn0020633.1.mrna1;Target=FBgn0020633.1 420 921 +
Chr1	stalkie_big_nohaplotig	exon	5543468	5544525	100	+	.	Parent=FBgn0020633.1.mrna1;Target=FBgn0020633.1 922 1979 +
Chr1	stalkie_big_nohaplotig	exon	5544586	5544784	100	+	.	Parent=FBgn0020633.1.mrna1;Target=FBgn0020633.1 1980 2178 +
Chr1	stalkie_big_nohaplotig	CDS	5542325	5542376	.	+	0	Parent=FBgn0020633.1.mrna1;Target=FBgn0020633.1 1 52 +
Chr1	stalkie_big_nohaplotig	CDS	5542470	5542836	.	+	2	Parent=FBgn0020633.1.mrna1;Target=FBgn0020633.1 53 419 +
Chr1	stalkie_big_nohaplotig	CDS	5542905	5543406	.	+	1	Parent=FBgn0020633.1.mrna1;Target=FBgn0020633.1 420 921 +
Chr1	stalkie_big_nohaplotig	CDS	5543468	5544525	.	+	0	Parent=FBgn0020633.1.mrna1;Target=FBgn0020633.1 922 1979 +
Chr1	stalkie_big_nohaplotig	CDS	5544586	5544784	.	+	1	Parent=FBgn0020633.1.mrna1;Target=FBgn0020633.1 1980 2178 +
Chr1	gffcl	locus	5548365	5561454	.	-	.	ID=RLOC_00005357;geneIDs=FBgn0026370.1.path1;transcripts=FBgn0026370.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5548365	5561454	.	-	.	ID=FBgn0026370.1.mrna1;geneID=FBgn0026370.1.path1;Name=FBgn0026370.1;Dir=sensecoverage=10.5;identity=100.0;matches=240;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005357
Chr1	stalkie_big_nohaplotig	exon	5548365	5548546	100	-	.	Parent=FBgn0026370.1.mrna1;Target=FBgn0026370.1 59 240 +
Chr1	stalkie_big_nohaplotig	exon	5561397	5561454	100	-	.	Parent=FBgn0026370.1.mrna1;Target=FBgn0026370.1 1 58 +
Chr1	stalkie_big_nohaplotig	CDS	5548365	5548546	.	-	2	Parent=FBgn0026370.1.mrna1;Target=FBgn0026370.1 59 240 +
Chr1	stalkie_big_nohaplotig	CDS	5561397	5561454	.	-	0	Parent=FBgn0026370.1.mrna1;Target=FBgn0026370.1 1 58 +
Chr1	gffcl	locus	5549707	5550053	.	+	.	ID=RLOC_00005358;geneIDs=comp137138_c0_seq1.path1;transcripts=comp137138_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5549707	5550053	.	+	.	ID=comp137138_c0_seq1.mrna1;geneID=comp137138_c0_seq1.path1;Name=comp137138_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=340;mismatches=6;indels=1;unknowns=0;Target=comp137138_c0_seq1 346 1 .;CDS_Target=comp137138_c0_seq1 61 2 .;locus=RLOC_00005358
Chr1	stalkie_big_nohaplotig	exon	5549707	5550053	97	+	.	Parent=comp137138_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5549708	5549767	.	+	0	Parent=comp137138_c0_seq1.mrna1
Chr1	gffcl	locus	5550747	5551460	.	-	.	ID=RLOC_00005359;geneIDs=FBgn0052179.1.path1;transcripts=FBgn0052179.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5550747	5551460	.	-	.	ID=FBgn0052179.1.mrna1;geneID=FBgn0052179.1.path1;Name=FBgn0052179.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=714;mismatches=0;indels=0;unknowns=0;Target=FBgn0052179.1 714 1 .;locus=RLOC_00005359
Chr1	stalkie_big_nohaplotig	exon	5550747	5551460	100	-	.	Parent=FBgn0052179.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5550747	5551460	.	-	0	Parent=FBgn0052179.1.mrna1
Chr1	gffcl	locus	5551667	5552095	.	-	.	ID=RLOC_00005360;geneIDs=comp116381_c0_seq1.path1;transcripts=comp116381_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5551667	5552095	.	-	.	ID=comp116381_c0_seq1.mrna1;geneID=comp116381_c0_seq1.path1;Name=comp116381_c0_seq1;Dir=antisensecoverage=95.7;identity=100.0;matches=358;mismatches=0;indels=0;unknowns=0;Target=comp116381_c0_seq1 83 184 .;locus=RLOC_00005360
Chr1	stalkie_big_nohaplotig	exon	5551667	5551893	100	-	.	Parent=comp116381_c0_seq1.mrna1;Target=comp116381_c0_seq1 1 227 -
Chr1	stalkie_big_nohaplotig	exon	5551965	5552095	100	-	.	Parent=comp116381_c0_seq1.mrna1;Target=comp116381_c0_seq1 228 358 -
Chr1	stalkie_big_nohaplotig	CDS	5551749	5551850	.	-	0	Parent=comp116381_c0_seq1.mrna1
Chr1	gffcl	locus	5565669	5566804	.	.	.	ID=RLOC_00005361;geneIDs=FBgn0261602.1.path1,comp112600_c0_seq1.path1;transcripts=FBgn0261602.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5565669	5566511	.	-	.	ID=FBgn0261602.1.mrna1;geneID=FBgn0261602.1.path1;Name=FBgn0261602.1;Dir=sensecoverage=100.0;identity=100.0;matches=777;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005361
Chr1	stalkie_big_nohaplotig	exon	5565669	5566298	100	-	.	Parent=FBgn0261602.1.mrna1;Target=FBgn0261602.1 148 777 +
Chr1	stalkie_big_nohaplotig	exon	5566365	5566511	100	-	.	Parent=FBgn0261602.1.mrna1;Target=FBgn0261602.1 1 147 +
Chr1	stalkie_big_nohaplotig	CDS	5565669	5566298	.	-	0	Parent=FBgn0261602.1.mrna1;Target=FBgn0261602.1 148 777 +
Chr1	stalkie_big_nohaplotig	CDS	5566365	5566511	.	-	0	Parent=FBgn0261602.1.mrna1;Target=FBgn0261602.1 1 147 +
Chr1	gffcl	locus	5568826	5569030	.	-	.	ID=RLOC_00005362;geneIDs=comp135410_c0_seq1.path1;transcripts=comp135410_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5568826	5569030	.	-	.	ID=comp135410_c0_seq1.mrna1;geneID=comp135410_c0_seq1.path1;Name=comp135410_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=201;mismatches=4;indels=0;unknowns=0;Target=comp135410_c0_seq1 205 1 .;CDS_Target=comp135410_c0_seq1 60 1 .;locus=RLOC_00005362
Chr1	stalkie_big_nohaplotig	exon	5568826	5569030	98	-	.	Parent=comp135410_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5568971	5569030	.	-	0	Parent=comp135410_c0_seq1.mrna1
Chr1	gffcl	locus	5570967	5633438	.	.	.	ID=RLOC_00005363;geneIDs=FBgn0010909.1.path1,comp61125_c0_seq1.path1,comp161115_c1_seq1.path1;transcripts=comp161115_c1_seq1.mrna1,FBgn0010909.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5571619	5598785	.	-	.	ID=comp161115_c1_seq1.mrna1;geneID=comp161115_c1_seq1.path1;Name=comp161115_c1_seq1;Dir=sensecoverage=89.0;identity=100.0;matches=3855;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005363
Chr1	stalkie_big_nohaplotig	exon	5571619	5572229	100	-	.	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 3720 4330 +
Chr1	stalkie_big_nohaplotig	exon	5574294	5574463	100	-	.	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 3550 3719 +
Chr1	stalkie_big_nohaplotig	exon	5574531	5574605	100	-	.	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 3475 3549 +
Chr1	stalkie_big_nohaplotig	exon	5575408	5575542	100	-	.	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 3340 3474 +
Chr1	stalkie_big_nohaplotig	exon	5575616	5575765	100	-	.	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 3190 3339 +
Chr1	stalkie_big_nohaplotig	exon	5576722	5576889	100	-	.	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 3022 3189 +
Chr1	stalkie_big_nohaplotig	exon	5576973	5577128	100	-	.	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 2866 3021 +
Chr1	stalkie_big_nohaplotig	exon	5577196	5577693	100	-	.	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 2368 2865 +
Chr1	stalkie_big_nohaplotig	exon	5583927	5584052	100	-	.	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 2242 2367 +
Chr1	stalkie_big_nohaplotig	exon	5593521	5593659	100	-	.	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 2103 2241 +
Chr1	stalkie_big_nohaplotig	exon	5595057	5595382	100	-	.	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 1777 2102 +
Chr1	stalkie_big_nohaplotig	exon	5596106	5596126	100	-	.	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 1756 1776 +
Chr1	stalkie_big_nohaplotig	exon	5596615	5596803	100	-	.	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 1567 1755 +
Chr1	stalkie_big_nohaplotig	exon	5596873	5597273	100	-	.	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 1166 1566 +
Chr1	stalkie_big_nohaplotig	exon	5597351	5597593	100	-	.	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 923 1165 +
Chr1	stalkie_big_nohaplotig	exon	5598339	5598785	100	-	.	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 476 922 +
Chr1	stalkie_big_nohaplotig	CDS	5572214	5572229	.	-	1	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 3720 3735 +
Chr1	stalkie_big_nohaplotig	CDS	5574294	5574463	.	-	0	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 3550 3719 +
Chr1	stalkie_big_nohaplotig	CDS	5574531	5574605	.	-	0	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 3475 3549 +
Chr1	stalkie_big_nohaplotig	CDS	5575408	5575542	.	-	0	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 3340 3474 +
Chr1	stalkie_big_nohaplotig	CDS	5575616	5575765	.	-	0	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 3190 3339 +
Chr1	stalkie_big_nohaplotig	CDS	5576722	5576889	.	-	0	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 3022 3189 +
Chr1	stalkie_big_nohaplotig	CDS	5576973	5577128	.	-	0	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 2866 3021 +
Chr1	stalkie_big_nohaplotig	CDS	5577196	5577693	.	-	0	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 2368 2865 +
Chr1	stalkie_big_nohaplotig	CDS	5583927	5584052	.	-	0	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 2242 2367 +
Chr1	stalkie_big_nohaplotig	CDS	5593521	5593659	.	-	1	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 2103 2241 +
Chr1	stalkie_big_nohaplotig	CDS	5595057	5595382	.	-	0	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 1777 2102 +
Chr1	stalkie_big_nohaplotig	CDS	5596106	5596126	.	-	0	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 1756 1776 +
Chr1	stalkie_big_nohaplotig	CDS	5596615	5596803	.	-	0	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 1567 1755 +
Chr1	stalkie_big_nohaplotig	CDS	5596873	5597273	.	-	2	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 1166 1566 +
Chr1	stalkie_big_nohaplotig	CDS	5597351	5597593	.	-	2	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 923 1165 +
Chr1	stalkie_big_nohaplotig	CDS	5598339	5598783	.	-	0	Parent=comp161115_c1_seq1.mrna1;Target=comp161115_c1_seq1 478 922 +
Chr1	stalkie_big_nohaplotig	mRNA	5574293	5633438	.	-	.	ID=FBgn0010909.1.mrna1;geneID=FBgn0010909.1.path1;Name=FBgn0010909.1;Dir=sensecoverage=100.0;identity=100.0;matches=3135;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005363
Chr1	stalkie_big_nohaplotig	exon	5574293	5574463	100	-	.	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 2965 3135 +
Chr1	stalkie_big_nohaplotig	exon	5574531	5574605	100	-	.	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 2890 2964 +
Chr1	stalkie_big_nohaplotig	exon	5575408	5575542	100	-	.	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 2755 2889 +
Chr1	stalkie_big_nohaplotig	exon	5575616	5575765	100	-	.	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 2605 2754 +
Chr1	stalkie_big_nohaplotig	exon	5576722	5576889	100	-	.	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 2437 2604 +
Chr1	stalkie_big_nohaplotig	exon	5576973	5577128	100	-	.	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 2281 2436 +
Chr1	stalkie_big_nohaplotig	exon	5577196	5577438	100	-	.	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 2038 2280 +
Chr1	stalkie_big_nohaplotig	exon	5583927	5584052	100	-	.	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 1912 2037 +
Chr1	stalkie_big_nohaplotig	exon	5593521	5593659	100	-	.	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 1773 1911 +
Chr1	stalkie_big_nohaplotig	exon	5595057	5595382	100	-	.	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 1447 1772 +
Chr1	stalkie_big_nohaplotig	exon	5596106	5596126	100	-	.	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 1426 1446 +
Chr1	stalkie_big_nohaplotig	exon	5596615	5596803	100	-	.	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 1237 1425 +
Chr1	stalkie_big_nohaplotig	exon	5596873	5597273	100	-	.	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 836 1236 +
Chr1	stalkie_big_nohaplotig	exon	5597351	5597593	100	-	.	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 593 835 +
Chr1	stalkie_big_nohaplotig	exon	5598339	5598783	100	-	.	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 148 592 +
Chr1	stalkie_big_nohaplotig	exon	5621627	5621692	100	-	.	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 82 147 +
Chr1	stalkie_big_nohaplotig	exon	5633358	5633438	100	-	.	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 1 81 +
Chr1	stalkie_big_nohaplotig	CDS	5574293	5574463	.	-	0	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 2965 3135 +
Chr1	stalkie_big_nohaplotig	CDS	5574531	5574605	.	-	0	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 2890 2964 +
Chr1	stalkie_big_nohaplotig	CDS	5575408	5575542	.	-	0	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 2755 2889 +
Chr1	stalkie_big_nohaplotig	CDS	5575616	5575765	.	-	0	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 2605 2754 +
Chr1	stalkie_big_nohaplotig	CDS	5576722	5576889	.	-	0	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 2437 2604 +
Chr1	stalkie_big_nohaplotig	CDS	5576973	5577128	.	-	0	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 2281 2436 +
Chr1	stalkie_big_nohaplotig	CDS	5577196	5577438	.	-	0	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 2038 2280 +
Chr1	stalkie_big_nohaplotig	CDS	5583927	5584052	.	-	0	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 1912 2037 +
Chr1	stalkie_big_nohaplotig	CDS	5593521	5593659	.	-	1	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 1773 1911 +
Chr1	stalkie_big_nohaplotig	CDS	5595057	5595382	.	-	0	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 1447 1772 +
Chr1	stalkie_big_nohaplotig	CDS	5596106	5596126	.	-	0	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 1426 1446 +
Chr1	stalkie_big_nohaplotig	CDS	5596615	5596803	.	-	0	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 1237 1425 +
Chr1	stalkie_big_nohaplotig	CDS	5596873	5597273	.	-	2	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 836 1236 +
Chr1	stalkie_big_nohaplotig	CDS	5597351	5597593	.	-	2	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 593 835 +
Chr1	stalkie_big_nohaplotig	CDS	5598339	5598783	.	-	0	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 148 592 +
Chr1	stalkie_big_nohaplotig	CDS	5621627	5621692	.	-	0	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 82 147 +
Chr1	stalkie_big_nohaplotig	CDS	5633358	5633438	.	-	0	Parent=FBgn0010909.1.mrna1;Target=FBgn0010909.1 1 81 +
Chr1	gffcl	locus	5573464	5573821	.	+	.	ID=RLOC_00005364;geneIDs=comp135565_c0_seq1.path1;transcripts=comp135565_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5573464	5573821	.	+	.	ID=comp135565_c0_seq1.mrna1;geneID=comp135565_c0_seq1.path1;Name=comp135565_c0_seq1;Dir=indeterminatecoverage=95.2;identity=99.4;matches=356;mismatches=1;indels=1;unknowns=0;Target=comp135565_c0_seq1 374 18 .;CDS_Target=comp135565_c0_seq1 215 132 .;locus=RLOC_00005364
Chr1	stalkie_big_nohaplotig	exon	5573464	5573821	99	+	.	Parent=comp135565_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5573578	5573662	.	+	0	Parent=comp135565_c0_seq1.mrna1
Chr1	gffcl	locus	5580128	5582039	.	+	.	ID=RLOC_00005365;geneIDs=comp157691_c0_seq1.path1;transcripts=comp157691_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5580128	5582039	.	+	.	ID=comp157691_c0_seq1.mrna1;geneID=comp157691_c0_seq1.path1;Name=comp157691_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1900;mismatches=12;indels=2;unknowns=0;Target=comp157691_c0_seq1 1914 1 .;CDS_Target=comp157691_c0_seq1 1480 1367 .;locus=RLOC_00005365
Chr1	stalkie_big_nohaplotig	exon	5580128	5582039	99	+	.	Parent=comp157691_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5581494	5581607	.	+	0	Parent=comp157691_c0_seq1.mrna1
Chr1	gffcl	locus	5633751	5634480	.	+	.	ID=RLOC_00005366;geneIDs=comp148461_c0_seq1.path1;transcripts=comp148461_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5633751	5634480	.	+	.	ID=comp148461_c0_seq1.mrna1;geneID=comp148461_c0_seq1.path1;Name=comp148461_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.3;matches=725;mismatches=5;indels=0;unknowns=0;Target=comp148461_c0_seq1 734 5 .;CDS_Target=comp148461_c0_seq1 243 187 .;locus=RLOC_00005366
Chr1	stalkie_big_nohaplotig	exon	5633751	5634480	99	+	.	Parent=comp148461_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5633933	5633989	.	+	0	Parent=comp148461_c0_seq1.mrna1
Chr1	gffcl	locus	5640901	5641900	.	+	.	ID=RLOC_00005367;geneIDs=comp65697_c0_seq1.path1;transcripts=comp65697_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5640901	5641900	.	+	.	ID=comp65697_c0_seq1.mrna1;geneID=comp65697_c0_seq1.path1;Name=comp65697_c0_seq1;Dir=antisensecoverage=99.2;identity=99.2;matches=504;mismatches=3;indels=1;unknowns=0;Target=comp65697_c0_seq1 281 511 .;locus=RLOC_00005367
Chr1	stalkie_big_nohaplotig	exon	5640901	5641141	98	+	.	Parent=comp65697_c0_seq1.mrna1;Target=comp65697_c0_seq1 271 512 -
Chr1	stalkie_big_nohaplotig	exon	5641635	5641900	99	+	.	Parent=comp65697_c0_seq1.mrna1;Target=comp65697_c0_seq1 5 270 -
Chr1	stalkie_big_nohaplotig	CDS	5640902	5641131	.	+	0	Parent=comp65697_c0_seq1.mrna1
Chr1	gffcl	locus	5642087	5642132	.	+	.	ID=RLOC_00005368;geneIDs=FBgn0004167.1.path1;transcripts=FBgn0004167.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5642087	5642132	.	+	.	ID=FBgn0004167.1.mrna1;geneID=FBgn0004167.1.path1;Name=FBgn0004167.1;Dir=indeterminatecoverage=0.4;identity=100.0;matches=46;mismatches=0;indels=0;unknowns=0;Target=FBgn0004167.1 46 1 .;locus=RLOC_00005368
Chr1	stalkie_big_nohaplotig	exon	5642087	5642132	100	+	.	Parent=FBgn0004167.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5642087	5642132	.	+	0	Parent=FBgn0004167.1.mrna1
Chr1	gffcl	locus	5681319	5689783	.	+	.	ID=RLOC_00005369;geneIDs=comp116739_c0_seq1.path1;transcripts=comp116739_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5681319	5689783	.	+	.	ID=comp116739_c0_seq1.mrna1;geneID=comp116739_c0_seq1.path1;Name=comp116739_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=330;mismatches=0;indels=1;unknowns=0;locus=RLOC_00005369
Chr1	stalkie_big_nohaplotig	exon	5681319	5681625	99	+	.	Parent=comp116739_c0_seq1.mrna1;Target=comp116739_c0_seq1 24 331 -
Chr1	stalkie_big_nohaplotig	exon	5689761	5689783	100	+	.	Parent=comp116739_c0_seq1.mrna1;Target=comp116739_c0_seq1 1 23 -
Chr1	stalkie_big_nohaplotig	CDS	5681559	5681625	.	+	0	Parent=comp116739_c0_seq1.mrna1;Target=comp116739_c0_seq1 24 90 .
Chr1	stalkie_big_nohaplotig	CDS	5689761	5689783	.	+	2	Parent=comp116739_c0_seq1.mrna1;Target=comp116739_c0_seq1 1 23 .
Chr1	gffcl	locus	5692341	5695072	.	-	.	ID=RLOC_00005370;geneIDs=FBgn0034835.1.path1;transcripts=FBgn0034835.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5692341	5695072	.	-	.	ID=FBgn0034835.1.mrna1;geneID=FBgn0034835.1.path1;Name=FBgn0034835.1;Dir=sensecoverage=100.0;identity=100.0;matches=912;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005370
Chr1	stalkie_big_nohaplotig	exon	5692341	5692639	100	-	.	Parent=FBgn0034835.1.mrna1;Target=FBgn0034835.1 614 912 +
Chr1	stalkie_big_nohaplotig	exon	5692858	5693056	100	-	.	Parent=FBgn0034835.1.mrna1;Target=FBgn0034835.1 415 613 +
Chr1	stalkie_big_nohaplotig	exon	5694659	5695072	100	-	.	Parent=FBgn0034835.1.mrna1;Target=FBgn0034835.1 1 414 +
Chr1	stalkie_big_nohaplotig	CDS	5692341	5692639	.	-	2	Parent=FBgn0034835.1.mrna1;Target=FBgn0034835.1 614 912 +
Chr1	stalkie_big_nohaplotig	CDS	5692858	5693056	.	-	0	Parent=FBgn0034835.1.mrna1;Target=FBgn0034835.1 415 613 +
Chr1	stalkie_big_nohaplotig	CDS	5694659	5695072	.	-	0	Parent=FBgn0034835.1.mrna1;Target=FBgn0034835.1 1 414 +
Chr1	gffcl	locus	5760198	6637793	.	-	.	ID=RLOC_00005371;geneIDs=FBgn0016756.1.path1,comp163462_c0_seq1.path1;transcripts=FBgn0016756.1.mrna1,comp163462_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5760198	6625003	.	-	.	ID=FBgn0016756.1.mrna1;geneID=FBgn0016756.1.path1;Name=FBgn0016756.1;Dir=sensecoverage=79.8;identity=97.8;matches=3615;mismatches=62;indels=21;unknowns=8;locus=RLOC_00005371
Chr1	stalkie_big_nohaplotig	exon	5760198	5760208	90	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3732 3742 +
Chr1	stalkie_big_nohaplotig	exon	5774786	5774799	85	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3718 3731 +
Chr1	stalkie_big_nohaplotig	exon	5781422	5781428	100	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3711 3717 +
Chr1	stalkie_big_nohaplotig	exon	5787683	5787688	100	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3705 3710 +
Chr1	stalkie_big_nohaplotig	exon	5789304	5789309	100	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3699 3704 +
Chr1	stalkie_big_nohaplotig	exon	5793930	5793939	100	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3689 3698 +
Chr1	stalkie_big_nohaplotig	exon	5815672	5815680	100	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3672 3680 +
Chr1	stalkie_big_nohaplotig	exon	5823020	5823031	83	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3660 3671 +
Chr1	stalkie_big_nohaplotig	exon	5825217	5825219	100	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3657 3659 +
Chr1	stalkie_big_nohaplotig	exon	5825302	5825312	90	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3646 3656 +
Chr1	stalkie_big_nohaplotig	exon	5832087	5832097	90	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3635 3645 +
Chr1	stalkie_big_nohaplotig	exon	5832256	5832264	77	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3626 3634 +
Chr1	stalkie_big_nohaplotig	exon	5839859	5839863	100	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3621 3625 +
Chr1	stalkie_big_nohaplotig	exon	5842969	5843026	50	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3567 3620 +
Chr1	stalkie_big_nohaplotig	exon	5844681	5844696	75	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3551 3566 +
Chr1	stalkie_big_nohaplotig	exon	5845923	5845927	100	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3546 3550 +
Chr1	stalkie_big_nohaplotig	exon	5861806	5861841	55	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3518 3545 +
Chr1	stalkie_big_nohaplotig	exon	5873891	5873900	100	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3508 3517 +
Chr1	stalkie_big_nohaplotig	exon	5874582	5874631	58	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3453 3507 +
Chr1	stalkie_big_nohaplotig	exon	6621288	6622543	100	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 2197 3452 +
Chr1	stalkie_big_nohaplotig	exon	6622607	6623060	100	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 1743 2196 +
Chr1	stalkie_big_nohaplotig	exon	6623177	6623667	100	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 1252 1742 +
Chr1	stalkie_big_nohaplotig	exon	6623726	6624727	99	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 250 1251 +
Chr1	stalkie_big_nohaplotig	exon	6624798	6625003	100	-	.	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 44 249 +
Chr1	stalkie_big_nohaplotig	CDS	5760199	5760208	.	-	2	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3732 3741 +
Chr1	stalkie_big_nohaplotig	CDS	5774786	5774799	.	-	1	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3718 3731 +
Chr1	stalkie_big_nohaplotig	CDS	5781422	5781428	.	-	2	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3711 3717 +
Chr1	stalkie_big_nohaplotig	CDS	5787683	5787688	.	-	2	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3705 3710 +
Chr1	stalkie_big_nohaplotig	CDS	5789304	5789309	.	-	2	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3699 3704 +
Chr1	stalkie_big_nohaplotig	CDS	5793930	5793939	.	-	0	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3689 3698 +
Chr1	stalkie_big_nohaplotig	CDS	5815672	5815680	.	-	0	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3672 3680 +
Chr1	stalkie_big_nohaplotig	CDS	5823020	5823031	.	-	0	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3660 3671 +
Chr1	stalkie_big_nohaplotig	CDS	5825217	5825219	.	-	0	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3657 3659 +
Chr1	stalkie_big_nohaplotig	CDS	5825302	5825312	.	-	2	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3646 3656 +
Chr1	stalkie_big_nohaplotig	CDS	5832087	5832097	.	-	1	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3635 3645 +
Chr1	stalkie_big_nohaplotig	CDS	5832256	5832264	.	-	1	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3626 3634 +
Chr1	stalkie_big_nohaplotig	CDS	5839859	5839863	.	-	0	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3621 3625 +
Chr1	stalkie_big_nohaplotig	CDS	5842969	5843026	.	-	1	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3567 3620 +
Chr1	stalkie_big_nohaplotig	CDS	5844681	5844696	.	-	2	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3551 3566 +
Chr1	stalkie_big_nohaplotig	CDS	5845923	5845927	.	-	1	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3546 3550 +
Chr1	stalkie_big_nohaplotig	CDS	5861806	5861841	.	-	1	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3518 3545 +
Chr1	stalkie_big_nohaplotig	CDS	5873891	5873900	.	-	2	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3508 3517 +
Chr1	stalkie_big_nohaplotig	CDS	5874582	5874631	.	-	1	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 3453 3507 +
Chr1	stalkie_big_nohaplotig	CDS	6621288	6622543	.	-	0	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 2197 3452 +
Chr1	stalkie_big_nohaplotig	CDS	6622607	6623060	.	-	1	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 1743 2196 +
Chr1	stalkie_big_nohaplotig	CDS	6623177	6623667	.	-	0	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 1252 1742 +
Chr1	stalkie_big_nohaplotig	CDS	6623726	6624727	.	-	0	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 250 1251 +
Chr1	stalkie_big_nohaplotig	CDS	6624798	6625001	.	-	0	Parent=FBgn0016756.1.mrna1;Target=FBgn0016756.1 46 249 +
Chr1	stalkie_big_nohaplotig	mRNA	6475653	6637793	.	-	.	ID=comp163462_c0_seq1.mrna1;geneID=comp163462_c0_seq1.path1;Name=comp163462_c0_seq1;Dir=antisensecoverage=57.5;identity=99.9;matches=3857;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005371
Chr1	stalkie_big_nohaplotig	exon	6475653	6475659	100	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 2932 2938 -
Chr1	stalkie_big_nohaplotig	exon	6481932	6481938	100	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 2939 2945 -
Chr1	stalkie_big_nohaplotig	exon	6492815	6492823	100	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 2946 2954 -
Chr1	stalkie_big_nohaplotig	exon	6497622	6497626	100	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 2955 2959 -
Chr1	stalkie_big_nohaplotig	exon	6505422	6505423	100	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 2960 2961 -
Chr1	stalkie_big_nohaplotig	exon	6505462	6505463	100	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3021 3022 -
Chr1	stalkie_big_nohaplotig	exon	6537400	6537415	81	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3023 3038 -
Chr1	stalkie_big_nohaplotig	exon	6541209	6541214	100	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3039 3044 -
Chr1	stalkie_big_nohaplotig	exon	6546806	6546807	100	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3045 3046 -
Chr1	stalkie_big_nohaplotig	exon	6567526	6567531	100	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3047 3052 -
Chr1	stalkie_big_nohaplotig	exon	6573338	6573341	100	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3053 3056 -
Chr1	stalkie_big_nohaplotig	exon	6585763	6585770	100	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3057 3064 -
Chr1	stalkie_big_nohaplotig	exon	6589452	6589456	100	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3065 3069 -
Chr1	stalkie_big_nohaplotig	exon	6589466	6589470	100	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3115 3119 -
Chr1	stalkie_big_nohaplotig	exon	6591673	6591674	100	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3120 3121 -
Chr1	stalkie_big_nohaplotig	exon	6596005	6596007	100	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3122 3124 -
Chr1	stalkie_big_nohaplotig	exon	6599916	6599924	100	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3125 3133 -
Chr1	stalkie_big_nohaplotig	exon	6621300	6622543	100	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3134 4377 -
Chr1	stalkie_big_nohaplotig	exon	6622607	6623060	100	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 4378 4831 -
Chr1	stalkie_big_nohaplotig	exon	6623177	6623667	100	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 4832 5322 -
Chr1	stalkie_big_nohaplotig	exon	6623726	6624727	99	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 5323 6324 -
Chr1	stalkie_big_nohaplotig	exon	6624798	6625003	100	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 6325 6530 -
Chr1	stalkie_big_nohaplotig	exon	6636778	6636918	100	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 6531 6671 -
Chr1	stalkie_big_nohaplotig	exon	6637569	6637793	100	-	.	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 6672 6896 -
Chr1	stalkie_big_nohaplotig	CDS	6475653	6475659	.	-	0	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 2932 2938 .
Chr1	stalkie_big_nohaplotig	CDS	6481932	6481938	.	-	1	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 2939 2945 .
Chr1	stalkie_big_nohaplotig	CDS	6492815	6492823	.	-	1	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 2946 2954 .
Chr1	stalkie_big_nohaplotig	CDS	6497622	6497626	.	-	0	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 2955 2959 .
Chr1	stalkie_big_nohaplotig	CDS	6505422	6505423	.	-	2	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 2960 2961 .
Chr1	stalkie_big_nohaplotig	CDS	6505462	6505463	.	-	1	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3021 3022 .
Chr1	stalkie_big_nohaplotig	CDS	6537400	6537415	.	-	2	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3023 3038 .
Chr1	stalkie_big_nohaplotig	CDS	6541209	6541214	.	-	2	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3039 3044 .
Chr1	stalkie_big_nohaplotig	CDS	6546806	6546807	.	-	1	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3045 3046 .
Chr1	stalkie_big_nohaplotig	CDS	6567526	6567531	.	-	1	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3047 3052 .
Chr1	stalkie_big_nohaplotig	CDS	6573338	6573341	.	-	2	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3053 3056 .
Chr1	stalkie_big_nohaplotig	CDS	6585763	6585770	.	-	1	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3057 3064 .
Chr1	stalkie_big_nohaplotig	CDS	6589452	6589456	.	-	0	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3065 3069 .
Chr1	stalkie_big_nohaplotig	CDS	6589466	6589470	.	-	2	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3115 3119 .
Chr1	stalkie_big_nohaplotig	CDS	6591673	6591674	.	-	1	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3120 3121 .
Chr1	stalkie_big_nohaplotig	CDS	6596005	6596007	.	-	1	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3122 3124 .
Chr1	stalkie_big_nohaplotig	CDS	6599916	6599924	.	-	1	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3125 3133 .
Chr1	stalkie_big_nohaplotig	CDS	6621300	6622543	.	-	0	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 3134 4377 .
Chr1	stalkie_big_nohaplotig	CDS	6622607	6623060	.	-	1	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 4378 4831 .
Chr1	stalkie_big_nohaplotig	CDS	6623177	6623667	.	-	0	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 4832 5322 .
Chr1	stalkie_big_nohaplotig	CDS	6623726	6624727	.	-	0	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 5323 6324 .
Chr1	stalkie_big_nohaplotig	CDS	6624798	6624983	.	-	0	Parent=comp163462_c0_seq1.mrna1;Target=comp163462_c0_seq1 6325 6510 .
Chr1	gffcl	locus	5774923	5775681	.	-	.	ID=RLOC_00005373;geneIDs=FBgn0050048.path1;transcripts=FBgn0050048.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5774923	5775681	.	-	.	ID=FBgn0050048.mrna1;geneID=FBgn0050048.path1;Name=FBgn0050048;Dir=indeterminatecoverage=100.0;identity=99.7;matches=757;mismatches=2;indels=0;unknowns=0;Target=FBgn0050048 759 1 .;locus=RLOC_00005373
Chr1	stalkie_big_nohaplotig	exon	5774923	5775681	99	-	.	Parent=FBgn0050048.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5774923	5775681	.	-	0	Parent=FBgn0050048.mrna1
Chr1	gffcl	locus	5775766	5776644	.	+	.	ID=RLOC_00005374;geneIDs=comp161526_c0_seq1.path1;transcripts=comp161526_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5775766	5776644	.	+	.	ID=comp161526_c0_seq1.mrna1;geneID=comp161526_c0_seq1.path1;Name=comp161526_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=879;mismatches=0;indels=0;unknowns=0;Target=comp161526_c0_seq1 879 1 .;CDS_Target=comp161526_c0_seq1 878 732 .;locus=RLOC_00005374
Chr1	stalkie_big_nohaplotig	exon	5775766	5776644	100	+	.	Parent=comp161526_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5776497	5776643	.	+	0	Parent=comp161526_c0_seq1.mrna1
Chr1	gffcl	locus	5794076	5794924	.	-	.	ID=RLOC_00005375;geneIDs=ORF2498.path1;transcripts=ORF2498.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5794076	5794924	.	-	.	ID=ORF2498.mrna1;geneID=ORF2498.path1;Name=ORF2498;Dir=indeterminatecoverage=100.0;identity=99.9;matches=848;mismatches=1;indels=0;unknowns=0;Target=ORF2498 849 1 .;locus=RLOC_00005375
Chr1	stalkie_big_nohaplotig	exon	5794076	5794924	99	-	.	Parent=ORF2498.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5794076	5794924	.	-	0	Parent=ORF2498.mrna1
Chr1	gffcl	locus	5796093	5798594	.	-	.	ID=RLOC_00005376;geneIDs=ORF291.path1;transcripts=ORF291.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5796093	5798594	.	-	.	ID=ORF291.mrna1;geneID=ORF291.path1;Name=ORF291;Dir=indeterminatecoverage=100.0;identity=97.0;matches=2064;mismatches=9;indels=54;unknowns=0;locus=RLOC_00005376
Chr1	stalkie_big_nohaplotig	exon	5796093	5797545	96	-	.	Parent=ORF291.mrna1;Target=ORF291 2127 621 .
Chr1	stalkie_big_nohaplotig	exon	5797975	5798594	99	-	.	Parent=ORF291.mrna1;Target=ORF291 620 1 .
Chr1	stalkie_big_nohaplotig	CDS	5796093	5797545	.	-	1	Parent=ORF291.mrna1;Target=ORF291 2127 621 .
Chr1	stalkie_big_nohaplotig	CDS	5797975	5798594	.	-	0	Parent=ORF291.mrna1;Target=ORF291 620 1 .
Chr1	gffcl	locus	5796093	5798606	.	+	.	ID=RLOC_00005377;geneIDs=comp148283_c1_seq1.path1;transcripts=comp148283_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5796093	5798606	.	+	.	ID=comp148283_c1_seq1.mrna1;geneID=comp148283_c1_seq1.path1;Name=comp148283_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2027;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005377
Chr1	stalkie_big_nohaplotig	exon	5796093	5796632	100	+	.	Parent=comp148283_c1_seq1.mrna1;Target=comp148283_c1_seq1 540 1 .
Chr1	stalkie_big_nohaplotig	exon	5796689	5797561	100	+	.	Parent=comp148283_c1_seq1.mrna1;Target=comp148283_c1_seq1 1523 651 .
Chr1	stalkie_big_nohaplotig	exon	5797991	5798606	99	+	.	Parent=comp148283_c1_seq1.mrna1;Target=comp148283_c1_seq1 2139 1524 .
Chr1	stalkie_big_nohaplotig	CDS	5797355	5797561	.	+	0	Parent=comp148283_c1_seq1.mrna1;Target=comp148283_c1_seq1 1523 1317 .
Chr1	stalkie_big_nohaplotig	CDS	5797991	5798050	.	+	0	Parent=comp148283_c1_seq1.mrna1;Target=comp148283_c1_seq1 1583 1524 .
Chr1	gffcl	locus	5800332	5803220	.	-	.	ID=RLOC_00005378;geneIDs=comp149089_c0_seq1.path1;transcripts=comp149089_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5800332	5803220	.	-	.	ID=comp149089_c0_seq1.mrna1;geneID=comp149089_c0_seq1.path1;Name=comp149089_c0_seq1;Dir=sensecoverage=99.8;identity=98.1;matches=529;mismatches=10;indels=0;unknowns=0;Target=comp149089_c0_seq1 329 433 +;locus=RLOC_00005378
Chr1	stalkie_big_nohaplotig	exon	5800332	5800567	99	-	.	Parent=comp149089_c0_seq1.mrna1;Target=comp149089_c0_seq1 305 540 +
Chr1	stalkie_big_nohaplotig	exon	5802714	5802823	97	-	.	Parent=comp149089_c0_seq1.mrna1;Target=comp149089_c0_seq1 195 304 +
Chr1	stalkie_big_nohaplotig	exon	5803028	5803220	96	-	.	Parent=comp149089_c0_seq1.mrna1;Target=comp149089_c0_seq1 2 194 +
Chr1	stalkie_big_nohaplotig	CDS	5800439	5800543	.	-	0	Parent=comp149089_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5881672	7554057	.	-	.	ID=comp157101_c0_seq1.mrna1;geneID=comp157101_c0_seq1.path1;Name=comp157101_c0_seq1;Dir=indeterminatecoverage=85.8;identity=94.0;matches=1359;mismatches=39;indels=47;unknowns=0;locus=RLOC_00005380
Chr1	stalkie_big_nohaplotig	exon	5881672	5881674	100	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1537 1535 .
Chr1	stalkie_big_nohaplotig	exon	5882619	5882627	88	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1525 1517 .
Chr1	stalkie_big_nohaplotig	exon	5882829	5882838	60	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1516 1511 .
Chr1	stalkie_big_nohaplotig	exon	5884631	5884635	100	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1510 1506 .
Chr1	stalkie_big_nohaplotig	exon	5891726	5891731	100	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1505 1500 .
Chr1	stalkie_big_nohaplotig	exon	5893208	5893215	87	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1499 1492 .
Chr1	stalkie_big_nohaplotig	exon	5896240	5896245	100	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1491 1486 .
Chr1	stalkie_big_nohaplotig	exon	5896534	5896535	100	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1485 1484 .
Chr1	stalkie_big_nohaplotig	exon	5903594	5903605	100	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1483 1472 .
Chr1	stalkie_big_nohaplotig	exon	5907558	5907561	100	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1471 1468 .
Chr1	stalkie_big_nohaplotig	exon	5914330	5914350	80	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1467 1448 .
Chr1	stalkie_big_nohaplotig	exon	5917855	5917858	100	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1447 1444 .
Chr1	stalkie_big_nohaplotig	exon	5926385	5926422	41	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1443 1366 .
Chr1	stalkie_big_nohaplotig	exon	5941445	5941449	100	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1349 1345 .
Chr1	stalkie_big_nohaplotig	exon	5942446	5942456	81	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1344 1334 .
Chr1	stalkie_big_nohaplotig	exon	5957002	5957008	100	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1333 1327 .
Chr1	stalkie_big_nohaplotig	exon	5965118	5965126	100	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1326 1318 .
Chr1	stalkie_big_nohaplotig	exon	6012298	6012303	100	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1317 1312 .
Chr1	stalkie_big_nohaplotig	exon	6017294	6017302	88	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1311 1303 .
Chr1	stalkie_big_nohaplotig	exon	6019066	6019073	100	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1302 1295 .
Chr1	stalkie_big_nohaplotig	exon	6021482	6021486	100	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1294 1290 .
Chr1	stalkie_big_nohaplotig	exon	6023065	6023068	100	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1289 1286 .
Chr1	stalkie_big_nohaplotig	exon	6027149	6027151	100	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1285 1283 .
Chr1	stalkie_big_nohaplotig	exon	6030928	6030936	100	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1282 1274 .
Chr1	stalkie_big_nohaplotig	exon	6031520	6031527	100	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1273 1266 .
Chr1	stalkie_big_nohaplotig	exon	6032944	6032949	100	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1265 1260 .
Chr1	stalkie_big_nohaplotig	exon	7552876	7554057	97	-	.	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1184 1 .
Chr1	stalkie_big_nohaplotig	CDS	5926410	5926422	.	-	1	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1383 1366 .
Chr1	stalkie_big_nohaplotig	CDS	5941445	5941449	.	-	0	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1349 1345 .
Chr1	stalkie_big_nohaplotig	CDS	5942446	5942456	.	-	2	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1344 1334 .
Chr1	stalkie_big_nohaplotig	CDS	5957002	5957008	.	-	0	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1333 1327 .
Chr1	stalkie_big_nohaplotig	CDS	5965118	5965126	.	-	0	Parent=comp157101_c0_seq1.mrna1;Target=comp157101_c0_seq1 1326 1318 .
Chr1	stalkie_big_nohaplotig	mRNA	5957792	5959623	.	-	.	ID=comp159980_c1_seq1.mrna1;geneID=comp159980_c1_seq1.path1;Name=comp159980_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1825;mismatches=7;indels=9;unknowns=0;Target=comp159980_c1_seq1 1841 1 .;CDS_Target=comp159980_c1_seq1 996 841 .;locus=RLOC_00005380
Chr1	stalkie_big_nohaplotig	exon	5957792	5959623	99	-	.	Parent=comp159980_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5958637	5958792	.	-	0	Parent=comp159980_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5959757	5960413	.	-	.	ID=comp147171_c0_seq1.mrna1;geneID=comp147171_c0_seq1.path1;Name=comp147171_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=465;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005380
Chr1	stalkie_big_nohaplotig	exon	5959757	5960197	100	-	.	Parent=comp147171_c0_seq1.mrna1;Target=comp147171_c0_seq1 25 465 +
Chr1	stalkie_big_nohaplotig	exon	5960390	5960413	100	-	.	Parent=comp147171_c0_seq1.mrna1;Target=comp147171_c0_seq1 1 24 +
Chr1	stalkie_big_nohaplotig	CDS	5959758	5960197	.	-	2	Parent=comp147171_c0_seq1.mrna1;Target=comp147171_c0_seq1 25 464 +
Chr1	stalkie_big_nohaplotig	CDS	5960390	5960411	.	-	0	Parent=comp147171_c0_seq1.mrna1;Target=comp147171_c0_seq1 3 24 +
Chr1	gffcl	locus	5900902	5902578	.	+	.	ID=RLOC_00005381;geneIDs=ORF534.path1;transcripts=ORF534.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5900902	5902578	.	+	.	ID=ORF534.mrna1;geneID=ORF534.path1;Name=ORF534;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1677;mismatches=0;indels=6;unknowns=0;Target=ORF534 1683 1 .;locus=RLOC_00005381
Chr1	stalkie_big_nohaplotig	exon	5900902	5902578	99	+	.	Parent=ORF534.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5900902	5902578	.	+	0	Parent=ORF534.mrna1
Chr1	gffcl	locus	5937739	5938214	.	+	.	ID=RLOC_00005382;geneIDs=comp705253_c0_seq1.path1;transcripts=comp705253_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5937739	5938214	.	+	.	ID=comp705253_c0_seq1.mrna1;geneID=comp705253_c0_seq1.path1;Name=comp705253_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=476;mismatches=0;indels=0;unknowns=0;Target=comp705253_c0_seq1 476 1 .;CDS_Target=comp705253_c0_seq1 155 63 .;locus=RLOC_00005382
Chr1	stalkie_big_nohaplotig	exon	5937739	5938214	100	+	.	Parent=comp705253_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5937801	5937893	.	+	0	Parent=comp705253_c0_seq1.mrna1
Chr1	gffcl	locus	5940133	5940431	.	+	.	ID=RLOC_00005383;geneIDs=FBgn0052038.1.path1;transcripts=FBgn0052038.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5940133	5940431	.	+	.	ID=FBgn0052038.1.mrna1;geneID=FBgn0052038.1.path1;Name=FBgn0052038.1;Dir=sensecoverage=100.0;identity=100.0;matches=240;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005383
Chr1	stalkie_big_nohaplotig	exon	5940133	5940244	100	+	.	Parent=FBgn0052038.1.mrna1;Target=FBgn0052038.1 1 112 +
Chr1	stalkie_big_nohaplotig	exon	5940304	5940431	100	+	.	Parent=FBgn0052038.1.mrna1;Target=FBgn0052038.1 113 240 +
Chr1	stalkie_big_nohaplotig	CDS	5940133	5940244	.	+	0	Parent=FBgn0052038.1.mrna1;Target=FBgn0052038.1 1 112 +
Chr1	stalkie_big_nohaplotig	CDS	5940304	5940431	.	+	2	Parent=FBgn0052038.1.mrna1;Target=FBgn0052038.1 113 240 +
Chr1	gffcl	locus	5943935	5945671	.	-	.	ID=RLOC_00005384;geneIDs=FBgn0035997.1.path1;transcripts=FBgn0035997.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5943935	5945671	.	-	.	ID=FBgn0035997.1.mrna1;geneID=FBgn0035997.1.path1;Name=FBgn0035997.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1736;mismatches=1;indels=0;unknowns=0;Target=FBgn0035997.1 1737 1 .;locus=RLOC_00005384
Chr1	stalkie_big_nohaplotig	exon	5943935	5945671	99	-	.	Parent=FBgn0035997.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	5943935	5945671	.	-	0	Parent=FBgn0035997.1.mrna1
Chr1	gffcl	locus	5948030	5949582	.	-	.	ID=RLOC_00005385;geneIDs=FBgn0035674.1.path1;transcripts=FBgn0035674.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5948030	5949582	.	-	.	ID=FBgn0035674.1.mrna1;geneID=FBgn0035674.1.path1;Name=FBgn0035674.1;Dir=sensecoverage=100.0;identity=99.7;matches=1493;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005385
Chr1	stalkie_big_nohaplotig	exon	5948030	5948974	99	-	.	Parent=FBgn0035674.1.mrna1;Target=FBgn0035674.1 553 1497 +
Chr1	stalkie_big_nohaplotig	exon	5949031	5949582	100	-	.	Parent=FBgn0035674.1.mrna1;Target=FBgn0035674.1 1 552 +
Chr1	stalkie_big_nohaplotig	CDS	5948030	5948974	.	-	0	Parent=FBgn0035674.1.mrna1;Target=FBgn0035674.1 553 1497 +
Chr1	stalkie_big_nohaplotig	CDS	5949031	5949582	.	-	0	Parent=FBgn0035674.1.mrna1;Target=FBgn0035674.1 1 552 +
Chr1	gffcl	locus	5952717	5954732	.	+	.	ID=RLOC_00005386;geneIDs=FBgn0035998.1.path1;transcripts=FBgn0035998.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5952717	5954732	.	+	.	ID=FBgn0035998.1.mrna1;geneID=FBgn0035998.1.path1;Name=FBgn0035998.1;Dir=sensecoverage=100.0;identity=100.0;matches=1062;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005386
Chr1	stalkie_big_nohaplotig	exon	5952717	5952802	100	+	.	Parent=FBgn0035998.1.mrna1;Target=FBgn0035998.1 1 86 +
Chr1	stalkie_big_nohaplotig	exon	5952857	5953030	100	+	.	Parent=FBgn0035998.1.mrna1;Target=FBgn0035998.1 87 260 +
Chr1	stalkie_big_nohaplotig	exon	5953090	5953251	100	+	.	Parent=FBgn0035998.1.mrna1;Target=FBgn0035998.1 261 422 +
Chr1	stalkie_big_nohaplotig	exon	5953309	5953530	100	+	.	Parent=FBgn0035998.1.mrna1;Target=FBgn0035998.1 423 644 +
Chr1	stalkie_big_nohaplotig	exon	5954260	5954400	100	+	.	Parent=FBgn0035998.1.mrna1;Target=FBgn0035998.1 645 785 +
Chr1	stalkie_big_nohaplotig	exon	5954456	5954732	100	+	.	Parent=FBgn0035998.1.mrna1;Target=FBgn0035998.1 786 1062 +
Chr1	stalkie_big_nohaplotig	CDS	5952717	5952802	.	+	0	Parent=FBgn0035998.1.mrna1;Target=FBgn0035998.1 1 86 +
Chr1	stalkie_big_nohaplotig	CDS	5952857	5953030	.	+	1	Parent=FBgn0035998.1.mrna1;Target=FBgn0035998.1 87 260 +
Chr1	stalkie_big_nohaplotig	CDS	5953090	5953251	.	+	1	Parent=FBgn0035998.1.mrna1;Target=FBgn0035998.1 261 422 +
Chr1	stalkie_big_nohaplotig	CDS	5953309	5953530	.	+	1	Parent=FBgn0035998.1.mrna1;Target=FBgn0035998.1 423 644 +
Chr1	stalkie_big_nohaplotig	CDS	5954260	5954400	.	+	1	Parent=FBgn0035998.1.mrna1;Target=FBgn0035998.1 645 785 +
Chr1	stalkie_big_nohaplotig	CDS	5954456	5954732	.	+	1	Parent=FBgn0035998.1.mrna1;Target=FBgn0035998.1 786 1062 +
Chr1	gffcl	locus	5956038	5956649	.	+	.	ID=RLOC_00005387;geneIDs=comp153628_c0_seq1.path1;transcripts=comp153628_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5956038	5956649	.	+	.	ID=comp153628_c0_seq1.mrna1;geneID=comp153628_c0_seq1.path1;Name=comp153628_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=590;mismatches=3;indels=14;unknowns=0;Target=comp153628_c0_seq1 607 512 .;locus=RLOC_00005387
Chr1	stalkie_big_nohaplotig	exon	5956038	5956306	94	+	.	Parent=comp153628_c0_seq1.mrna1;Target=comp153628_c0_seq1 282 1 .
Chr1	stalkie_big_nohaplotig	exon	5956326	5956649	99	+	.	Parent=comp153628_c0_seq1.mrna1;Target=comp153628_c0_seq1 607 283 .
Chr1	stalkie_big_nohaplotig	CDS	5956554	5956649	.	+	0	Parent=comp153628_c0_seq1.mrna1
Chr1	gffcl	locus	5990443	5998681	.	+	.	ID=RLOC_00005388;geneIDs=FBgn0038799.1.path1;transcripts=FBgn0038799.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	5990443	5998681	.	+	.	ID=FBgn0038799.1.mrna1;geneID=FBgn0038799.1.path1;Name=FBgn0038799.1;Dir=sensecoverage=100.0;identity=100.0;matches=1506;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005388
Chr1	stalkie_big_nohaplotig	exon	5990443	5990516	100	+	.	Parent=FBgn0038799.1.mrna1;Target=FBgn0038799.1 1 74 +
Chr1	stalkie_big_nohaplotig	exon	5997045	5997348	100	+	.	Parent=FBgn0038799.1.mrna1;Target=FBgn0038799.1 75 378 +
Chr1	stalkie_big_nohaplotig	exon	5997415	5997955	100	+	.	Parent=FBgn0038799.1.mrna1;Target=FBgn0038799.1 379 919 +
Chr1	stalkie_big_nohaplotig	exon	5998023	5998299	100	+	.	Parent=FBgn0038799.1.mrna1;Target=FBgn0038799.1 920 1196 +
Chr1	stalkie_big_nohaplotig	exon	5998372	5998681	100	+	.	Parent=FBgn0038799.1.mrna1;Target=FBgn0038799.1 1197 1506 +
Chr1	stalkie_big_nohaplotig	CDS	5990443	5990516	.	+	0	Parent=FBgn0038799.1.mrna1;Target=FBgn0038799.1 1 74 +
Chr1	stalkie_big_nohaplotig	CDS	5997045	5997348	.	+	1	Parent=FBgn0038799.1.mrna1;Target=FBgn0038799.1 75 378 +
Chr1	stalkie_big_nohaplotig	CDS	5997415	5997955	.	+	0	Parent=FBgn0038799.1.mrna1;Target=FBgn0038799.1 379 919 +
Chr1	stalkie_big_nohaplotig	CDS	5998023	5998299	.	+	2	Parent=FBgn0038799.1.mrna1;Target=FBgn0038799.1 920 1196 +
Chr1	stalkie_big_nohaplotig	CDS	5998372	5998681	.	+	1	Parent=FBgn0038799.1.mrna1;Target=FBgn0038799.1 1197 1506 +
Chr1	gffcl	locus	6009926	6010133	.	+	.	ID=RLOC_00005389;geneIDs=comp145509_c0_seq1.path1;transcripts=comp145509_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6009926	6010133	.	+	.	ID=comp145509_c0_seq1.mrna1;geneID=comp145509_c0_seq1.path1;Name=comp145509_c0_seq1;Dir=indeterminatecoverage=63.8;identity=100.0;matches=208;mismatches=0;indels=0;unknowns=0;Target=comp145509_c0_seq1 326 119 .;CDS_Target=comp145509_c0_seq1 226 119 .;locus=RLOC_00005389
Chr1	stalkie_big_nohaplotig	exon	6009926	6010133	100	+	.	Parent=comp145509_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6009926	6010033	.	+	0	Parent=comp145509_c0_seq1.mrna1
Chr1	gffcl	locus	6010259	6023022	.	+	.	ID=RLOC_00005390;geneIDs=FBgn0039742.1.path1;transcripts=FBgn0039742.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6010259	6023022	.	+	.	ID=FBgn0039742.1.mrna1;geneID=FBgn0039742.1.path1;Name=FBgn0039742.1;Dir=sensecoverage=100.0;identity=99.7;matches=619;mismatches=1;indels=1;unknowns=0;locus=RLOC_00005390
Chr1	stalkie_big_nohaplotig	exon	6010259	6010428	100	+	.	Parent=FBgn0039742.1.mrna1;Target=FBgn0039742.1 1 170 +
Chr1	stalkie_big_nohaplotig	exon	6022573	6023022	99	+	.	Parent=FBgn0039742.1.mrna1;Target=FBgn0039742.1 171 621 +
Chr1	stalkie_big_nohaplotig	CDS	6010259	6010428	.	+	0	Parent=FBgn0039742.1.mrna1;Target=FBgn0039742.1 1 170 +
Chr1	stalkie_big_nohaplotig	CDS	6022573	6023022	.	+	1	Parent=FBgn0039742.1.mrna1;Target=FBgn0039742.1 171 621 +
Chr1	gffcl	locus	6034459	6035039	.	+	.	ID=RLOC_00005391;geneIDs=comp114893_c0_seq1.path1;transcripts=comp114893_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6034459	6035039	.	+	.	ID=comp114893_c0_seq1.mrna1;geneID=comp114893_c0_seq1.path1;Name=comp114893_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=580;mismatches=1;indels=0;unknowns=0;Target=comp114893_c0_seq1 581 1 .;CDS_Target=comp114893_c0_seq1 541 419 .;locus=RLOC_00005391
Chr1	stalkie_big_nohaplotig	exon	6034459	6035039	99	+	.	Parent=comp114893_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6034877	6034999	.	+	0	Parent=comp114893_c0_seq1.mrna1
Chr1	gffcl	locus	6112175	6112690	.	-	.	ID=RLOC_00005392;geneIDs=comp154982_c0_seq1.path1;transcripts=comp154982_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6112175	6112690	.	-	.	ID=comp154982_c0_seq1.mrna1;geneID=comp154982_c0_seq1.path1;Name=comp154982_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=516;mismatches=0;indels=0;unknowns=0;Target=comp154982_c0_seq1 516 1 .;CDS_Target=comp154982_c0_seq1 175 2 .;locus=RLOC_00005392
Chr1	stalkie_big_nohaplotig	exon	6112175	6112690	100	-	.	Parent=comp154982_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6112516	6112689	.	-	0	Parent=comp154982_c0_seq1.mrna1
Chr1	gffcl	locus	6124131	6124688	.	-	.	ID=RLOC_00005393;geneIDs=comp159693_c1_seq1.path2;transcripts=comp159693_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	6124131	6124688	.	-	.	ID=comp159693_c1_seq1.mrna2;geneID=comp159693_c1_seq1.path2;Name=comp159693_c1_seq1;Dir=sensecoverage=30.6;identity=96.4;matches=432;mismatches=8;indels=8;unknowns=0;locus=RLOC_00005393
Chr1	stalkie_big_nohaplotig	exon	6124131	6124342	94	-	.	Parent=comp159693_c1_seq1.mrna2;Target=comp159693_c1_seq1 1244 1463 +
Chr1	stalkie_big_nohaplotig	exon	6124407	6124497	98	-	.	Parent=comp159693_c1_seq1.mrna2;Target=comp159693_c1_seq1 1153 1243 +
Chr1	stalkie_big_nohaplotig	exon	6124552	6124688	97	-	.	Parent=comp159693_c1_seq1.mrna2;Target=comp159693_c1_seq1 1016 1152 +
Chr1	gffcl	locus	6138855	6139247	.	-	.	ID=RLOC_00005394;geneIDs=comp112583_c1_seq1.path1;transcripts=comp112583_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6138855	6139247	.	-	.	ID=comp112583_c1_seq1.mrna1;geneID=comp112583_c1_seq1.path1;Name=comp112583_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=393;mismatches=0;indels=0;unknowns=0;Target=comp112583_c1_seq1 393 1 .;CDS_Target=comp112583_c1_seq1 391 221 .;locus=RLOC_00005394
Chr1	stalkie_big_nohaplotig	exon	6138855	6139247	100	-	.	Parent=comp112583_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6138857	6139027	.	-	0	Parent=comp112583_c1_seq1.mrna1
Chr1	gffcl	locus	6173578	6183480	.	-	.	ID=RLOC_00005395;geneIDs=FBgn0035626.1.path1;transcripts=FBgn0035626.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6173578	6183480	.	-	.	ID=FBgn0035626.1.mrna1;geneID=FBgn0035626.1.path1;Name=FBgn0035626.1;Dir=sensecoverage=100.0;identity=98.9;matches=721;mismatches=8;indels=0;unknowns=0;locus=RLOC_00005395
Chr1	stalkie_big_nohaplotig	exon	6173578	6173637	98	-	.	Parent=FBgn0035626.1.mrna1;Target=FBgn0035626.1 670 729 +
Chr1	stalkie_big_nohaplotig	exon	6173708	6174004	98	-	.	Parent=FBgn0035626.1.mrna1;Target=FBgn0035626.1 373 669 +
Chr1	stalkie_big_nohaplotig	exon	6174108	6174226	99	-	.	Parent=FBgn0035626.1.mrna1;Target=FBgn0035626.1 254 372 +
Chr1	stalkie_big_nohaplotig	exon	6183228	6183480	99	-	.	Parent=FBgn0035626.1.mrna1;Target=FBgn0035626.1 1 253 +
Chr1	stalkie_big_nohaplotig	CDS	6173578	6173637	.	-	0	Parent=FBgn0035626.1.mrna1;Target=FBgn0035626.1 670 729 +
Chr1	stalkie_big_nohaplotig	CDS	6173708	6174004	.	-	0	Parent=FBgn0035626.1.mrna1;Target=FBgn0035626.1 373 669 +
Chr1	stalkie_big_nohaplotig	CDS	6174108	6174226	.	-	2	Parent=FBgn0035626.1.mrna1;Target=FBgn0035626.1 254 372 +
Chr1	stalkie_big_nohaplotig	CDS	6183228	6183480	.	-	0	Parent=FBgn0035626.1.mrna1;Target=FBgn0035626.1 1 253 +
Chr1	gffcl	locus	6193376	6194068	.	-	.	ID=RLOC_00005396;geneIDs=CPIJ008386.1.path1;transcripts=CPIJ008386.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6193376	6194068	.	-	.	ID=CPIJ008386.1.mrna1;geneID=CPIJ008386.1.path1;Name=CPIJ008386.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=691;mismatches=2;indels=0;unknowns=0;Target=CPIJ008386.1 693 1 .;locus=RLOC_00005396
Chr1	stalkie_big_nohaplotig	exon	6193376	6194068	99	-	.	Parent=CPIJ008386.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6193376	6194068	.	-	0	Parent=CPIJ008386.1.mrna1
Chr1	gffcl	locus	6219515	6219895	.	+	.	ID=RLOC_00005397;geneIDs=comp142899_c0_seq1.path1;transcripts=comp142899_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6219515	6219895	.	+	.	ID=comp142899_c0_seq1.mrna1;geneID=comp142899_c0_seq1.path1;Name=comp142899_c0_seq1;Dir=indeterminatecoverage=94.0;identity=95.0;matches=363;mismatches=11;indels=8;unknowns=0;Target=comp142899_c0_seq1 375 1 .;CDS_Target=comp142899_c0_seq1 375 244 .;locus=RLOC_00005397
Chr1	stalkie_big_nohaplotig	exon	6219515	6219895	95	+	.	Parent=comp142899_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6219765	6219895	.	+	0	Parent=comp142899_c0_seq1.mrna1
Chr1	gffcl	locus	6224791	6225205	.	+	.	ID=RLOC_00005398;geneIDs=comp83629_c0_seq1.path1;transcripts=comp83629_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6224791	6225205	.	+	.	ID=comp83629_c0_seq1.mrna1;geneID=comp83629_c0_seq1.path1;Name=comp83629_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=413;mismatches=2;indels=0;unknowns=0;Target=comp83629_c0_seq1 415 1 .;CDS_Target=comp83629_c0_seq1 157 101 .;locus=RLOC_00005398
Chr1	stalkie_big_nohaplotig	exon	6224791	6225205	99	+	.	Parent=comp83629_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6224891	6224947	.	+	0	Parent=comp83629_c0_seq1.mrna1
Chr1	gffcl	locus	6227899	6228366	.	+	.	ID=RLOC_00005399;geneIDs=comp150803_c0_seq1.path1;transcripts=comp150803_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6227899	6228366	.	+	.	ID=comp150803_c0_seq1.mrna1;geneID=comp150803_c0_seq1.path1;Name=comp150803_c0_seq1;Dir=indeterminatecoverage=78.6;identity=97.9;matches=459;mismatches=7;indels=3;unknowns=0;Target=comp150803_c0_seq1 594 128 .;CDS_Target=comp150803_c0_seq1 376 326 .;locus=RLOC_00005399
Chr1	stalkie_big_nohaplotig	exon	6227899	6228366	97	+	.	Parent=comp150803_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6228096	6228148	.	+	0	Parent=comp150803_c0_seq1.mrna1
Chr1	gffcl	locus	6231406	6236937	.	-	.	ID=RLOC_00005400;geneIDs=FBgn0035625.1.path1,comp161981_c0_seq1.path1;transcripts=comp161981_c0_seq1.mrna1,FBgn0035625.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6231406	6235377	.	-	.	ID=comp161981_c0_seq1.mrna1;geneID=comp161981_c0_seq1.path1;Name=comp161981_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=3846;mismatches=20;indels=0;unknowns=0;locus=RLOC_00005400
Chr1	stalkie_big_nohaplotig	exon	6231406	6231753	98	-	.	Parent=comp161981_c0_seq1.mrna1;Target=comp161981_c0_seq1 1 348 -
Chr1	stalkie_big_nohaplotig	exon	6231860	6235377	99	-	.	Parent=comp161981_c0_seq1.mrna1;Target=comp161981_c0_seq1 349 3866 -
Chr1	stalkie_big_nohaplotig	CDS	6231407	6231753	.	-	2	Parent=comp161981_c0_seq1.mrna1;Target=comp161981_c0_seq1 2 348 .
Chr1	stalkie_big_nohaplotig	CDS	6231860	6234407	.	-	0	Parent=comp161981_c0_seq1.mrna1;Target=comp161981_c0_seq1 349 2896 .
Chr1	stalkie_big_nohaplotig	mRNA	6231407	6236937	.	-	.	ID=FBgn0035625.1.mrna1;geneID=FBgn0035625.1.path1;Name=FBgn0035625.1;Dir=sensecoverage=100.0;identity=99.5;matches=3308;mismatches=16;indels=0;unknowns=0;locus=RLOC_00005400
Chr1	stalkie_big_nohaplotig	exon	6231407	6231753	98	-	.	Parent=FBgn0035625.1.mrna1;Target=FBgn0035625.1 2978 3324 +
Chr1	stalkie_big_nohaplotig	exon	6231860	6234467	99	-	.	Parent=FBgn0035625.1.mrna1;Target=FBgn0035625.1 370 2977 +
Chr1	stalkie_big_nohaplotig	exon	6235520	6235636	100	-	.	Parent=FBgn0035625.1.mrna1;Target=FBgn0035625.1 253 369 +
Chr1	stalkie_big_nohaplotig	exon	6236686	6236937	100	-	.	Parent=FBgn0035625.1.mrna1;Target=FBgn0035625.1 1 252 +
Chr1	stalkie_big_nohaplotig	CDS	6231407	6231753	.	-	2	Parent=FBgn0035625.1.mrna1;Target=FBgn0035625.1 2978 3324 +
Chr1	stalkie_big_nohaplotig	CDS	6231860	6234467	.	-	0	Parent=FBgn0035625.1.mrna1;Target=FBgn0035625.1 370 2977 +
Chr1	stalkie_big_nohaplotig	CDS	6235520	6235636	.	-	0	Parent=FBgn0035625.1.mrna1;Target=FBgn0035625.1 253 369 +
Chr1	stalkie_big_nohaplotig	CDS	6236686	6236937	.	-	0	Parent=FBgn0035625.1.mrna1;Target=FBgn0035625.1 1 252 +
Chr1	gffcl	locus	6238238	6249095	.	+	.	ID=RLOC_00005401;geneIDs=comp146131_c0_seq1.path1,comp153112_c0_seq1.path1;transcripts=comp146131_c0_seq1.mrna1,comp153112_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6238238	6241918	.	+	.	ID=comp146131_c0_seq1.mrna1;geneID=comp146131_c0_seq1.path1;Name=comp146131_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=694;mismatches=0;indels=0;unknowns=0;Target=comp146131_c0_seq1 240 407 +;locus=RLOC_00005401
Chr1	stalkie_big_nohaplotig	exon	6238238	6238690	100	+	.	Parent=comp146131_c0_seq1.mrna1;Target=comp146131_c0_seq1 1 453 +
Chr1	stalkie_big_nohaplotig	exon	6241678	6241918	100	+	.	Parent=comp146131_c0_seq1.mrna1;Target=comp146131_c0_seq1 454 694 +
Chr1	stalkie_big_nohaplotig	CDS	6238477	6238644	.	+	0	Parent=comp146131_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6238669	6249095	.	+	.	ID=comp153112_c0_seq1.mrna1;geneID=comp153112_c0_seq1.path1;Name=comp153112_c0_seq1;Dir=antisensecoverage=100.0;identity=92.8;matches=530;mismatches=26;indels=15;unknowns=0;locus=RLOC_00005401
Chr1	stalkie_big_nohaplotig	exon	6238669	6238690	100	+	.	Parent=comp153112_c0_seq1.mrna1;Target=comp153112_c0_seq1 543 564 -
Chr1	stalkie_big_nohaplotig	exon	6248484	6248765	91	+	.	Parent=comp153112_c0_seq1.mrna1;Target=comp153112_c0_seq1 260 542 -
Chr1	stalkie_big_nohaplotig	exon	6248837	6249095	93	+	.	Parent=comp153112_c0_seq1.mrna1;Target=comp153112_c0_seq1 1 259 -
Chr1	stalkie_big_nohaplotig	CDS	6238669	6238690	.	+	0	Parent=comp153112_c0_seq1.mrna1;Target=comp153112_c0_seq1 543 564 .
Chr1	stalkie_big_nohaplotig	CDS	6248484	6248523	.	+	2	Parent=comp153112_c0_seq1.mrna1;Target=comp153112_c0_seq1 499 542 .
Chr1	gffcl	locus	6249502	6249894	.	+	.	ID=RLOC_00005402;geneIDs=comp112583_c1_seq1.path2;transcripts=comp112583_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	6249502	6249894	.	+	.	ID=comp112583_c1_seq1.mrna2;geneID=comp112583_c1_seq1.path2;Name=comp112583_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=391;mismatches=2;indels=0;unknowns=0;Target=comp112583_c1_seq1 393 1 .;CDS_Target=comp112583_c1_seq1 391 221 .;locus=RLOC_00005402
Chr1	stalkie_big_nohaplotig	exon	6249502	6249894	99	+	.	Parent=comp112583_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	6249722	6249892	.	+	0	Parent=comp112583_c1_seq1.mrna2
Chr1	gffcl	locus	6281930	6307388	.	+	.	ID=RLOC_00005403;geneIDs=comp143273_c1_seq1.path1;transcripts=comp143273_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6281930	6307388	.	+	.	ID=comp143273_c1_seq1.mrna1;geneID=comp143273_c1_seq1.path1;Name=comp143273_c1_seq1;Dir=sensecoverage=99.7;identity=99.5;matches=582;mismatches=1;indels=2;unknowns=0;Target=comp143273_c1_seq1 291 401 +;locus=RLOC_00005403
Chr1	stalkie_big_nohaplotig	exon	6281930	6282115	98	+	.	Parent=comp143273_c1_seq1.mrna1;Target=comp143273_c1_seq1 3 186 +
Chr1	stalkie_big_nohaplotig	exon	6282432	6282791	100	+	.	Parent=comp143273_c1_seq1.mrna1;Target=comp143273_c1_seq1 187 546 +
Chr1	stalkie_big_nohaplotig	exon	6307350	6307388	100	+	.	Parent=comp143273_c1_seq1.mrna1;Target=comp143273_c1_seq1 547 585 +
Chr1	stalkie_big_nohaplotig	CDS	6282536	6282646	.	+	0	Parent=comp143273_c1_seq1.mrna1
Chr1	gffcl	locus	6285891	6286572	.	+	.	ID=RLOC_00005404;geneIDs=comp151630_c0_seq1.path1;transcripts=comp151630_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6285891	6286572	.	+	.	ID=comp151630_c0_seq1.mrna1;geneID=comp151630_c0_seq1.path1;Name=comp151630_c0_seq1;Dir=sensecoverage=98.6;identity=100.0;matches=623;mismatches=0;indels=0;unknowns=0;Target=comp151630_c0_seq1 131 376 +;locus=RLOC_00005404
Chr1	stalkie_big_nohaplotig	exon	6285891	6286283	100	+	.	Parent=comp151630_c0_seq1.mrna1;Target=comp151630_c0_seq1 2 394 +
Chr1	stalkie_big_nohaplotig	exon	6286343	6286572	100	+	.	Parent=comp151630_c0_seq1.mrna1;Target=comp151630_c0_seq1 395 624 +
Chr1	stalkie_big_nohaplotig	CDS	6286020	6286265	.	+	0	Parent=comp151630_c0_seq1.mrna1
Chr1	gffcl	locus	6321189	6321391	.	-	.	ID=RLOC_00005405;geneIDs=comp59205_c0_seq1.path1;transcripts=comp59205_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6321189	6321391	.	-	.	ID=comp59205_c0_seq1.mrna1;geneID=comp59205_c0_seq1.path1;Name=comp59205_c0_seq1;Dir=indeterminatecoverage=91.9;identity=100.0;matches=203;mismatches=0;indels=0;unknowns=0;Target=comp59205_c0_seq1 204 2 .;CDS_Target=comp59205_c0_seq1 170 3 .;locus=RLOC_00005405
Chr1	stalkie_big_nohaplotig	exon	6321189	6321391	100	-	.	Parent=comp59205_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6321223	6321390	.	-	0	Parent=comp59205_c0_seq1.mrna1
Chr1	gffcl	locus	6361551	6366214	.	-	.	ID=RLOC_00005406;geneIDs=FBgn0035627.1.path1;transcripts=FBgn0035627.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6361551	6366214	.	-	.	ID=FBgn0035627.1.mrna1;geneID=FBgn0035627.1.path1;Name=FBgn0035627.1;Dir=sensecoverage=100.0;identity=99.9;matches=1919;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005406
Chr1	stalkie_big_nohaplotig	exon	6361551	6361723	99	-	.	Parent=FBgn0035627.1.mrna1;Target=FBgn0035627.1 1748 1920 +
Chr1	stalkie_big_nohaplotig	exon	6362746	6362906	100	-	.	Parent=FBgn0035627.1.mrna1;Target=FBgn0035627.1 1587 1747 +
Chr1	stalkie_big_nohaplotig	exon	6362976	6363143	100	-	.	Parent=FBgn0035627.1.mrna1;Target=FBgn0035627.1 1419 1586 +
Chr1	stalkie_big_nohaplotig	exon	6363209	6363344	100	-	.	Parent=FBgn0035627.1.mrna1;Target=FBgn0035627.1 1283 1418 +
Chr1	stalkie_big_nohaplotig	exon	6363427	6363589	100	-	.	Parent=FBgn0035627.1.mrna1;Target=FBgn0035627.1 1120 1282 +
Chr1	stalkie_big_nohaplotig	exon	6363651	6363724	100	-	.	Parent=FBgn0035627.1.mrna1;Target=FBgn0035627.1 1046 1119 +
Chr1	stalkie_big_nohaplotig	exon	6363790	6364081	100	-	.	Parent=FBgn0035627.1.mrna1;Target=FBgn0035627.1 754 1045 +
Chr1	stalkie_big_nohaplotig	exon	6364143	6364444	100	-	.	Parent=FBgn0035627.1.mrna1;Target=FBgn0035627.1 452 753 +
Chr1	stalkie_big_nohaplotig	exon	6365619	6365788	100	-	.	Parent=FBgn0035627.1.mrna1;Target=FBgn0035627.1 282 451 +
Chr1	stalkie_big_nohaplotig	exon	6365855	6366047	100	-	.	Parent=FBgn0035627.1.mrna1;Target=FBgn0035627.1 89 281 +
Chr1	stalkie_big_nohaplotig	exon	6366127	6366214	100	-	.	Parent=FBgn0035627.1.mrna1;Target=FBgn0035627.1 1 88 +
Chr1	stalkie_big_nohaplotig	CDS	6361551	6361723	.	-	2	Parent=FBgn0035627.1.mrna1;Target=FBgn0035627.1 1748 1920 +
Chr1	stalkie_big_nohaplotig	CDS	6362746	6362906	.	-	1	Parent=FBgn0035627.1.mrna1;Target=FBgn0035627.1 1587 1747 +
Chr1	stalkie_big_nohaplotig	CDS	6362976	6363143	.	-	1	Parent=FBgn0035627.1.mrna1;Target=FBgn0035627.1 1419 1586 +
Chr1	stalkie_big_nohaplotig	CDS	6363209	6363344	.	-	2	Parent=FBgn0035627.1.mrna1;Target=FBgn0035627.1 1283 1418 +
Chr1	stalkie_big_nohaplotig	CDS	6363427	6363589	.	-	0	Parent=FBgn0035627.1.mrna1;Target=FBgn0035627.1 1120 1282 +
Chr1	stalkie_big_nohaplotig	CDS	6363651	6363724	.	-	2	Parent=FBgn0035627.1.mrna1;Target=FBgn0035627.1 1046 1119 +
Chr1	stalkie_big_nohaplotig	CDS	6363790	6364081	.	-	0	Parent=FBgn0035627.1.mrna1;Target=FBgn0035627.1 754 1045 +
Chr1	stalkie_big_nohaplotig	CDS	6364143	6364444	.	-	2	Parent=FBgn0035627.1.mrna1;Target=FBgn0035627.1 452 753 +
Chr1	stalkie_big_nohaplotig	CDS	6365619	6365788	.	-	1	Parent=FBgn0035627.1.mrna1;Target=FBgn0035627.1 282 451 +
Chr1	stalkie_big_nohaplotig	CDS	6365855	6366047	.	-	2	Parent=FBgn0035627.1.mrna1;Target=FBgn0035627.1 89 281 +
Chr1	stalkie_big_nohaplotig	CDS	6366127	6366214	.	-	0	Parent=FBgn0035627.1.mrna1;Target=FBgn0035627.1 1 88 +
Chr1	gffcl	locus	6425693	6427645	.	+	.	ID=RLOC_00005407;geneIDs=comp144516_c0_seq1.path1,comp151940_c0_seq1.path1;transcripts=comp151940_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6426446	6427645	.	+	.	ID=comp151940_c0_seq1.mrna1;geneID=comp151940_c0_seq1.path1;Name=comp151940_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.8;matches=1175;mismatches=16;indels=49;unknowns=0;Target=comp151940_c0_seq1 1231 1 .;CDS_Target=comp151940_c0_seq1 174 1 .;locus=RLOC_00005407
Chr1	stalkie_big_nohaplotig	exon	6426446	6427645	94	+	.	Parent=comp151940_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6426446	6426619	.	+	0	Parent=comp151940_c0_seq1.mrna1
Chr1	gffcl	locus	6521523	6531690	.	+	.	ID=RLOC_00005408;geneIDs=comp147824_c0_seq1.path1;transcripts=comp147824_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6521523	6531690	.	+	.	ID=comp147824_c0_seq1.mrna1;geneID=comp147824_c0_seq1.path1;Name=comp147824_c0_seq1;Dir=sensecoverage=100.0;identity=98.4;matches=479;mismatches=0;indels=8;unknowns=0;locus=RLOC_00005408
Chr1	stalkie_big_nohaplotig	exon	6521523	6521848	97	+	.	Parent=comp147824_c0_seq1.mrna1;Target=comp147824_c0_seq1 1 318 +
Chr1	stalkie_big_nohaplotig	exon	6531530	6531690	100	+	.	Parent=comp147824_c0_seq1.mrna1;Target=comp147824_c0_seq1 319 479 +
Chr1	stalkie_big_nohaplotig	CDS	6521784	6521848	.	+	0	Parent=comp147824_c0_seq1.mrna1;Target=comp147824_c0_seq1 254 318 +
Chr1	stalkie_big_nohaplotig	CDS	6531530	6531587	.	+	1	Parent=comp147824_c0_seq1.mrna1;Target=comp147824_c0_seq1 319 376 +
Chr1	gffcl	locus	6629463	6629807	.	+	.	ID=RLOC_00005409;geneIDs=comp122949_c0_seq1.path1;transcripts=comp122949_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6629463	6629807	.	+	.	ID=comp122949_c0_seq1.mrna1;geneID=comp122949_c0_seq1.path1;Name=comp122949_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=344;mismatches=0;indels=1;unknowns=0;Target=comp122949_c0_seq1 344 1 .;CDS_Target=comp122949_c0_seq1 174 1 .;locus=RLOC_00005409
Chr1	stalkie_big_nohaplotig	exon	6629463	6629807	99	+	.	Parent=comp122949_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6629463	6629636	.	+	0	Parent=comp122949_c0_seq1.mrna1
Chr1	gffcl	locus	6645412	6645456	.	+	.	ID=RLOC_00005410;geneIDs=comp844864_c0_seq1.path2;transcripts=comp844864_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	6645412	6645456	.	+	.	ID=comp844864_c0_seq1.mrna2;geneID=comp844864_c0_seq1.path2;Name=comp844864_c0_seq1;Dir=indeterminatecoverage=17.9;identity=97.8;matches=44;mismatches=1;indels=0;unknowns=0;Target=comp844864_c0_seq1 252 208 .;CDS_Target=comp844864_c0_seq1 250 208 .;locus=RLOC_00005410
Chr1	stalkie_big_nohaplotig	exon	6645412	6645456	97	+	.	Parent=comp844864_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	6645412	6645454	.	+	2	Parent=comp844864_c0_seq1.mrna2
Chr1	gffcl	locus	6646376	6646625	.	+	.	ID=RLOC_00005411;geneIDs=comp154026_c1_seq1.path2;transcripts=comp154026_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	6646376	6646625	.	+	.	ID=comp154026_c1_seq1.mrna2;geneID=comp154026_c1_seq1.path2;Name=comp154026_c1_seq1;Dir=indeterminatecoverage=8.3;identity=100.0;matches=250;mismatches=0;indels=0;unknowns=0;Target=comp154026_c1_seq1 3007 2758 .;locus=RLOC_00005411
Chr1	stalkie_big_nohaplotig	exon	6646376	6646625	100	+	.	Parent=comp154026_c1_seq1.mrna2
Chr1	gffcl	locus	6648654	6650699	.	-	.	ID=RLOC_00005412;geneIDs=FBgn0260859.1.path1;transcripts=FBgn0260859.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6648654	6650699	.	-	.	ID=FBgn0260859.1.mrna1;geneID=FBgn0260859.1.path1;Name=FBgn0260859.1;Dir=sensecoverage=100.0;identity=99.6;matches=666;mismatches=0;indels=3;unknowns=0;locus=RLOC_00005412
Chr1	stalkie_big_nohaplotig	exon	6648654	6648737	100	-	.	Parent=FBgn0260859.1.mrna1;Target=FBgn0260859.1 586 669 +
Chr1	stalkie_big_nohaplotig	exon	6648807	6649217	100	-	.	Parent=FBgn0260859.1.mrna1;Target=FBgn0260859.1 175 585 +
Chr1	stalkie_big_nohaplotig	exon	6650529	6650699	98	-	.	Parent=FBgn0260859.1.mrna1;Target=FBgn0260859.1 1 174 +
Chr1	stalkie_big_nohaplotig	CDS	6649162	6649217	.	-	0	Parent=FBgn0260859.1.mrna1;Target=FBgn0260859.1 175 230 +
Chr1	stalkie_big_nohaplotig	CDS	6650529	6650567	.	-	0	Parent=FBgn0260859.1.mrna1;Target=FBgn0260859.1 135 174 +
Chr1	gffcl	locus	6649438	6650382	.	-	.	ID=RLOC_00005413;geneIDs=FBgn0035993.1.path1;transcripts=FBgn0035993.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6649438	6650382	.	-	.	ID=FBgn0035993.1.mrna1;geneID=FBgn0035993.1.path1;Name=FBgn0035993.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=945;mismatches=0;indels=0;unknowns=0;Target=FBgn0035993.1 945 1 .;locus=RLOC_00005413
Chr1	stalkie_big_nohaplotig	exon	6649438	6650382	100	-	.	Parent=FBgn0035993.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6649438	6650382	.	-	0	Parent=FBgn0035993.1.mrna1
Chr1	gffcl	locus	6654249	6655298	.	+	.	ID=RLOC_00005414;geneIDs=FBgn0263106.1.path1;transcripts=FBgn0263106.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6654249	6655298	.	+	.	ID=FBgn0263106.1.mrna1;geneID=FBgn0263106.1.path1;Name=FBgn0263106.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1050;mismatches=0;indels=0;unknowns=0;Target=FBgn0263106.1 1050 1 .;locus=RLOC_00005414
Chr1	stalkie_big_nohaplotig	exon	6654249	6655298	100	+	.	Parent=FBgn0263106.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6654249	6655298	.	+	0	Parent=FBgn0263106.1.mrna1
Chr1	gffcl	locus	6658041	6659387	.	-	.	ID=RLOC_00005415;geneIDs=comp134747_c0_seq1.path1,comp142456_c0_seq1.path1;transcripts=comp142456_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6658682	6659387	.	-	.	ID=comp142456_c0_seq1.mrna1;geneID=comp142456_c0_seq1.path1;Name=comp142456_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.4;matches=702;mismatches=4;indels=0;unknowns=0;Target=comp142456_c0_seq1 707 2 .;CDS_Target=comp142456_c0_seq1 83 3 .;locus=RLOC_00005415
Chr1	stalkie_big_nohaplotig	exon	6658682	6659387	99	-	.	Parent=comp142456_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6659306	6659386	.	-	0	Parent=comp142456_c0_seq1.mrna1
Chr1	gffcl	locus	6659405	6659702	.	-	.	ID=RLOC_00005416;geneIDs=comp507273_c0_seq1.path1;transcripts=comp507273_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6659405	6659702	.	-	.	ID=comp507273_c0_seq1.mrna1;geneID=comp507273_c0_seq1.path1;Name=comp507273_c0_seq1;Dir=indeterminatecoverage=93.7;identity=99.7;matches=297;mismatches=1;indels=0;unknowns=0;Target=comp507273_c0_seq1 298 1 .;CDS_Target=comp507273_c0_seq1 155 3 .;locus=RLOC_00005416
Chr1	stalkie_big_nohaplotig	exon	6659405	6659702	99	-	.	Parent=comp507273_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6659548	6659700	.	-	0	Parent=comp507273_c0_seq1.mrna1
Chr1	gffcl	locus	6662235	6662504	.	+	.	ID=RLOC_00005417;geneIDs=comp153028_c0_seq1.path1;transcripts=comp153028_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6662235	6662504	.	+	.	ID=comp153028_c0_seq1.mrna1;geneID=comp153028_c0_seq1.path1;Name=comp153028_c0_seq1;Dir=indeterminatecoverage=63.2;identity=100.0;matches=270;mismatches=0;indels=0;unknowns=0;Target=comp153028_c0_seq1 284 15 .;CDS_Target=comp153028_c0_seq1 87 16 .;locus=RLOC_00005417
Chr1	stalkie_big_nohaplotig	exon	6662235	6662504	100	+	.	Parent=comp153028_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6662236	6662307	.	+	0	Parent=comp153028_c0_seq1.mrna1
Chr1	gffcl	locus	6665650	6666032	.	-	.	ID=RLOC_00005418;geneIDs=comp113348_c0_seq1.path1;transcripts=comp113348_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6665650	6666032	.	-	.	ID=comp113348_c0_seq1.mrna1;geneID=comp113348_c0_seq1.path1;Name=comp113348_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=383;mismatches=0;indels=0;unknowns=0;Target=comp113348_c0_seq1 383 1 .;CDS_Target=comp113348_c0_seq1 109 2 .;locus=RLOC_00005418
Chr1	stalkie_big_nohaplotig	exon	6665650	6666032	100	-	.	Parent=comp113348_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6665924	6666031	.	-	0	Parent=comp113348_c0_seq1.mrna1
Chr1	gffcl	locus	6669553	6670302	.	+	.	ID=RLOC_00005419;geneIDs=comp150473_c0_seq1.path1;transcripts=comp150473_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6669553	6670302	.	+	.	ID=comp150473_c0_seq1.mrna1;geneID=comp150473_c0_seq1.path1;Name=comp150473_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.2;matches=717;mismatches=31;indels=5;unknowns=0;Target=comp150473_c0_seq1 751 1 .;CDS_Target=comp150473_c0_seq1 588 451 .;locus=RLOC_00005419
Chr1	stalkie_big_nohaplotig	exon	6669553	6670302	95	+	.	Parent=comp150473_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6670005	6670142	.	+	0	Parent=comp150473_c0_seq1.mrna1
Chr1	gffcl	locus	6674616	6730123	.	-	.	ID=RLOC_00005420;geneIDs=FBgn0085447.1.path1;transcripts=FBgn0085447.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6674616	6730123	.	-	.	ID=FBgn0085447.1.mrna1;geneID=FBgn0085447.1.path1;Name=FBgn0085447.1;Dir=sensecoverage=39.2;identity=100.0;matches=2383;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005420
Chr1	stalkie_big_nohaplotig	exon	6674616	6674719	100	-	.	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 5904 6007 +
Chr1	stalkie_big_nohaplotig	exon	6674975	6675140	100	-	.	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 5738 5903 +
Chr1	stalkie_big_nohaplotig	exon	6675370	6675577	100	-	.	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 5530 5737 +
Chr1	stalkie_big_nohaplotig	exon	6675637	6676008	100	-	.	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 5158 5529 +
Chr1	stalkie_big_nohaplotig	exon	6676080	6676237	100	-	.	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 5000 5157 +
Chr1	stalkie_big_nohaplotig	exon	6676414	6676551	100	-	.	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 4862 4999 +
Chr1	stalkie_big_nohaplotig	exon	6676637	6676816	100	-	.	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 4682 4861 +
Chr1	stalkie_big_nohaplotig	exon	6687358	6687466	100	-	.	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 4573 4681 +
Chr1	stalkie_big_nohaplotig	exon	6695113	6695307	100	-	.	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 4378 4572 +
Chr1	stalkie_big_nohaplotig	exon	6704217	6704360	100	-	.	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 4234 4377 +
Chr1	stalkie_big_nohaplotig	exon	6706312	6706466	100	-	.	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 4079 4233 +
Chr1	stalkie_big_nohaplotig	exon	6709925	6710076	100	-	.	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 3927 4078 +
Chr1	stalkie_big_nohaplotig	exon	6719998	6720112	100	-	.	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 3812 3926 +
Chr1	stalkie_big_nohaplotig	exon	6729937	6730123	100	-	.	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 3625 3811 +
Chr1	stalkie_big_nohaplotig	CDS	6674617	6674719	.	-	1	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 5904 6006 +
Chr1	stalkie_big_nohaplotig	CDS	6674975	6675140	.	-	2	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 5738 5903 +
Chr1	stalkie_big_nohaplotig	CDS	6675370	6675577	.	-	0	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 5530 5737 +
Chr1	stalkie_big_nohaplotig	CDS	6675637	6676008	.	-	0	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 5158 5529 +
Chr1	stalkie_big_nohaplotig	CDS	6676080	6676237	.	-	2	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 5000 5157 +
Chr1	stalkie_big_nohaplotig	CDS	6676414	6676551	.	-	2	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 4862 4999 +
Chr1	stalkie_big_nohaplotig	CDS	6676637	6676816	.	-	2	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 4682 4861 +
Chr1	stalkie_big_nohaplotig	CDS	6687358	6687466	.	-	0	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 4573 4681 +
Chr1	stalkie_big_nohaplotig	CDS	6695113	6695307	.	-	0	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 4378 4572 +
Chr1	stalkie_big_nohaplotig	CDS	6704217	6704360	.	-	0	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 4234 4377 +
Chr1	stalkie_big_nohaplotig	CDS	6706312	6706466	.	-	2	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 4079 4233 +
Chr1	stalkie_big_nohaplotig	CDS	6709925	6710076	.	-	1	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 3927 4078 +
Chr1	stalkie_big_nohaplotig	CDS	6719998	6720112	.	-	2	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 3812 3926 +
Chr1	stalkie_big_nohaplotig	CDS	6729937	6730123	.	-	0	Parent=FBgn0085447.1.mrna1;Target=FBgn0085447.1 3625 3811 +
Chr1	gffcl	locus	6757135	6757427	.	+	.	ID=RLOC_00005422;geneIDs=comp113796_c0_seq1.path1;transcripts=comp113796_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6757135	6757427	.	+	.	ID=comp113796_c0_seq1.mrna1;geneID=comp113796_c0_seq1.path1;Name=comp113796_c0_seq1;Dir=indeterminatecoverage=97.0;identity=99.3;matches=291;mismatches=2;indels=0;unknowns=0;Target=comp113796_c0_seq1 293 1 .;CDS_Target=comp113796_c0_seq1 179 87 .;locus=RLOC_00005422
Chr1	stalkie_big_nohaplotig	exon	6757135	6757427	99	+	.	Parent=comp113796_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6757221	6757313	.	+	0	Parent=comp113796_c0_seq1.mrna1
Chr1	gffcl	locus	6767689	6768534	.	-	.	ID=RLOC_00005423;geneIDs=FBgn0052371.1.path1;transcripts=FBgn0052371.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6767689	6768534	.	-	.	ID=FBgn0052371.1.mrna1;geneID=FBgn0052371.1.path1;Name=FBgn0052371.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=846;mismatches=0;indels=0;unknowns=0;Target=FBgn0052371.1 846 1 .;locus=RLOC_00005423
Chr1	stalkie_big_nohaplotig	exon	6767689	6768534	100	-	.	Parent=FBgn0052371.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6767689	6768534	.	-	0	Parent=FBgn0052371.1.mrna1
Chr1	gffcl	locus	6783254	6783545	.	-	.	ID=RLOC_00005425;geneIDs=comp113796_c0_seq1.path2;transcripts=comp113796_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	6783254	6783545	.	-	.	ID=comp113796_c0_seq1.mrna2;geneID=comp113796_c0_seq1.path2;Name=comp113796_c0_seq1;Dir=indeterminatecoverage=97.0;identity=99.0;matches=290;mismatches=2;indels=1;unknowns=0;Target=comp113796_c0_seq1 293 1 .;CDS_Target=comp113796_c0_seq1 179 87 .;locus=RLOC_00005425
Chr1	stalkie_big_nohaplotig	exon	6783254	6783545	98	-	.	Parent=comp113796_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	6783368	6783460	.	-	0	Parent=comp113796_c0_seq1.mrna2
Chr1	gffcl	locus	6798181	6799007	.	-	.	ID=RLOC_00005426;geneIDs=ORF2654.path1;transcripts=ORF2654.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6798181	6799007	.	-	.	ID=ORF2654.mrna1;geneID=ORF2654.path1;Name=ORF2654;Dir=indeterminatecoverage=99.9;identity=100.0;matches=827;mismatches=0;indels=0;unknowns=0;Target=ORF2654 828 2 .;CDS_Target=ORF2654 828 4 .;locus=RLOC_00005426
Chr1	stalkie_big_nohaplotig	exon	6798181	6799007	100	-	.	Parent=ORF2654.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6798181	6799005	.	-	0	Parent=ORF2654.mrna1
Chr1	gffcl	locus	6800623	6801328	.	+	.	ID=RLOC_00005427;geneIDs=FBgn0036728.1.path1;transcripts=FBgn0036728.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6800623	6801328	.	+	.	ID=FBgn0036728.1.mrna1;geneID=FBgn0036728.1.path1;Name=FBgn0036728.1;Dir=sensecoverage=100.0;identity=100.0;matches=342;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005427
Chr1	stalkie_big_nohaplotig	exon	6800623	6800672	100	+	.	Parent=FBgn0036728.1.mrna1;Target=FBgn0036728.1 1 50 +
Chr1	stalkie_big_nohaplotig	exon	6800972	6801171	100	+	.	Parent=FBgn0036728.1.mrna1;Target=FBgn0036728.1 51 250 +
Chr1	stalkie_big_nohaplotig	exon	6801237	6801328	100	+	.	Parent=FBgn0036728.1.mrna1;Target=FBgn0036728.1 251 342 +
Chr1	stalkie_big_nohaplotig	CDS	6800623	6800672	.	+	0	Parent=FBgn0036728.1.mrna1;Target=FBgn0036728.1 1 50 +
Chr1	stalkie_big_nohaplotig	CDS	6800972	6801171	.	+	1	Parent=FBgn0036728.1.mrna1;Target=FBgn0036728.1 51 250 +
Chr1	stalkie_big_nohaplotig	CDS	6801237	6801328	.	+	2	Parent=FBgn0036728.1.mrna1;Target=FBgn0036728.1 251 342 +
Chr1	gffcl	locus	6802961	6803321	.	-	.	ID=RLOC_00005428;geneIDs=comp173028_c0_seq1.path1;transcripts=comp173028_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6802961	6803321	.	-	.	ID=comp173028_c0_seq1.mrna1;geneID=comp173028_c0_seq1.path1;Name=comp173028_c0_seq1;Dir=indeterminatecoverage=94.8;identity=100.0;matches=361;mismatches=0;indels=0;unknowns=0;Target=comp173028_c0_seq1 381 21 .;CDS_Target=comp173028_c0_seq1 199 56 .;locus=RLOC_00005428
Chr1	stalkie_big_nohaplotig	exon	6802961	6803321	100	-	.	Parent=comp173028_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6803143	6803286	.	-	0	Parent=comp173028_c0_seq1.mrna1
Chr1	gffcl	locus	6805097	6806166	.	-	.	ID=RLOC_00005429;geneIDs=comp151480_c0_seq1.path1;transcripts=comp151480_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6805097	6806166	.	-	.	ID=comp151480_c0_seq1.mrna1;geneID=comp151480_c0_seq1.path1;Name=comp151480_c0_seq1;Dir=antisensecoverage=100.0;identity=97.5;matches=935;mismatches=18;indels=6;unknowns=0;Target=comp151480_c0_seq1 492 611 .;locus=RLOC_00005429
Chr1	stalkie_big_nohaplotig	exon	6805097	6805253	98	-	.	Parent=comp151480_c0_seq1.mrna1;Target=comp151480_c0_seq1 1 157 -
Chr1	stalkie_big_nohaplotig	exon	6805312	6805924	96	-	.	Parent=comp151480_c0_seq1.mrna1;Target=comp151480_c0_seq1 158 766 -
Chr1	stalkie_big_nohaplotig	exon	6805979	6806166	100	-	.	Parent=comp151480_c0_seq1.mrna1;Target=comp151480_c0_seq1 767 954 -
Chr1	stalkie_big_nohaplotig	CDS	6805650	6805769	.	-	0	Parent=comp151480_c0_seq1.mrna1
Chr1	gffcl	locus	6848586	6971381	.	-	.	ID=RLOC_00005430;geneIDs=comp87603_c0_seq1.path1,comp93378_c0_seq1.path1,comp144781_c0_seq1.path1;transcripts=comp144781_c0_seq1.mrna1,comp87603_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6848586	6971381	.	-	.	ID=comp144781_c0_seq1.mrna1;geneID=comp144781_c0_seq1.path1;Name=comp144781_c0_seq1;Dir=indeterminatecoverage=79.3;identity=90.5;matches=1497;mismatches=67;indels=91;unknowns=0;locus=RLOC_00005430
Chr1	stalkie_big_nohaplotig	exon	6848586	6848638	64	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1745 1697 .
Chr1	stalkie_big_nohaplotig	exon	6859852	6859861	100	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1696 1687 .
Chr1	stalkie_big_nohaplotig	exon	6860577	6860593	82	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1686 1671 .
Chr1	stalkie_big_nohaplotig	exon	6861181	6861187	100	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1670 1664 .
Chr1	stalkie_big_nohaplotig	exon	6861242	6861249	100	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1663 1656 .
Chr1	stalkie_big_nohaplotig	exon	6870419	6870420	100	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1655 1654 .
Chr1	stalkie_big_nohaplotig	exon	6870483	6870494	100	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1653 1642 .
Chr1	stalkie_big_nohaplotig	exon	6874724	6874732	100	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1627 1619 .
Chr1	stalkie_big_nohaplotig	exon	6874734	6874813	47	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1580 1501 .
Chr1	stalkie_big_nohaplotig	exon	6877188	6877196	100	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1489 1481 .
Chr1	stalkie_big_nohaplotig	exon	6877200	6877209	100	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1437 1428 .
Chr1	stalkie_big_nohaplotig	exon	6879911	6879933	52	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1427 1388 .
Chr1	stalkie_big_nohaplotig	exon	6882164	6882165	50	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1387 1386 .
Chr1	stalkie_big_nohaplotig	exon	6887291	6887293	100	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1385 1383 .
Chr1	stalkie_big_nohaplotig	exon	6903445	6903449	100	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1382 1378 .
Chr1	stalkie_big_nohaplotig	exon	6909817	6909826	100	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1377 1368 .
Chr1	stalkie_big_nohaplotig	exon	6916389	6916395	60	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1367 1358 .
Chr1	stalkie_big_nohaplotig	exon	6916469	6916479	100	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1356 1346 .
Chr1	stalkie_big_nohaplotig	exon	6918252	6918297	43	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1326 1284 .
Chr1	stalkie_big_nohaplotig	exon	6920143	6920149	100	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1283 1277 .
Chr1	stalkie_big_nohaplotig	exon	6933873	6933875	100	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1276 1274 .
Chr1	stalkie_big_nohaplotig	exon	6935195	6935208	85	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1273 1260 .
Chr1	stalkie_big_nohaplotig	exon	6935775	6935808	61	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1259 1233 .
Chr1	stalkie_big_nohaplotig	exon	6938208	6938217	100	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1232 1223 .
Chr1	stalkie_big_nohaplotig	exon	6940775	6940783	100	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1222 1214 .
Chr1	stalkie_big_nohaplotig	exon	6947235	6947236	100	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1213 1212 .
Chr1	stalkie_big_nohaplotig	exon	6960485	6960501	76	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1211 1195 .
Chr1	stalkie_big_nohaplotig	exon	6966926	6966930	100	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1194 1190 .
Chr1	stalkie_big_nohaplotig	exon	6970202	6971381	99	-	.	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1189 10 .
Chr1	stalkie_big_nohaplotig	CDS	6960488	6960501	.	-	2	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1208 1195 .
Chr1	stalkie_big_nohaplotig	CDS	6966926	6966930	.	-	1	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1194 1190 .
Chr1	stalkie_big_nohaplotig	CDS	6970202	6970278	.	-	0	Parent=comp144781_c0_seq1.mrna1;Target=comp144781_c0_seq1 1189 1113 .
Chr1	stalkie_big_nohaplotig	mRNA	6919649	6920724	.	-	.	ID=comp87603_c0_seq1.mrna1;geneID=comp87603_c0_seq1.path1;Name=comp87603_c0_seq1;Dir=indeterminatecoverage=97.8;identity=99.9;matches=1076;mismatches=0;indels=1;unknowns=0;Target=comp87603_c0_seq1 1101 25 .;CDS_Target=comp87603_c0_seq1 440 372 .;locus=RLOC_00005430
Chr1	stalkie_big_nohaplotig	exon	6919649	6920724	99	-	.	Parent=comp87603_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6920310	6920378	.	-	0	Parent=comp87603_c0_seq1.mrna1
Chr1	gffcl	locus	6855476	6855990	.	-	.	ID=RLOC_00005431;geneIDs=comp135049_c0_seq1.path1;transcripts=comp135049_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6855476	6855990	.	-	.	ID=comp135049_c0_seq1.mrna1;geneID=comp135049_c0_seq1.path1;Name=comp135049_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.0;matches=510;mismatches=5;indels=0;unknowns=0;Target=comp135049_c0_seq1 516 2 .;CDS_Target=comp135049_c0_seq1 385 56 .;locus=RLOC_00005431
Chr1	stalkie_big_nohaplotig	exon	6855476	6855990	99	-	.	Parent=comp135049_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6855607	6855936	.	-	0	Parent=comp135049_c0_seq1.mrna1
Chr1	gffcl	locus	6858197	6858535	.	-	.	ID=RLOC_00005432;geneIDs=FBgn0052185.1.path1;transcripts=FBgn0052185.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6858197	6858535	.	-	.	ID=FBgn0052185.1.mrna1;geneID=FBgn0052185.1.path1;Name=FBgn0052185.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=339;mismatches=0;indels=0;unknowns=0;Target=FBgn0052185.1 339 1 .;locus=RLOC_00005432
Chr1	stalkie_big_nohaplotig	exon	6858197	6858535	100	-	.	Parent=FBgn0052185.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6858197	6858535	.	-	0	Parent=FBgn0052185.1.mrna1
Chr1	gffcl	locus	6863246	6863816	.	+	.	ID=RLOC_00005433;geneIDs=comp63539_c0_seq1.path1;transcripts=comp63539_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6863246	6863816	.	+	.	ID=comp63539_c0_seq1.mrna1;geneID=comp63539_c0_seq1.path1;Name=comp63539_c0_seq1;Dir=indeterminatecoverage=98.1;identity=99.8;matches=570;mismatches=1;indels=0;unknowns=0;Target=comp63539_c0_seq1 582 12 .;CDS_Target=comp63539_c0_seq1 213 133 .;locus=RLOC_00005433
Chr1	stalkie_big_nohaplotig	exon	6863246	6863816	99	+	.	Parent=comp63539_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6863367	6863447	.	+	0	Parent=comp63539_c0_seq1.mrna1
Chr1	gffcl	locus	6873250	6873814	.	-	.	ID=RLOC_00005434;geneIDs=comp81903_c0_seq1.path1;transcripts=comp81903_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6873250	6873814	.	-	.	ID=comp81903_c0_seq1.mrna1;geneID=comp81903_c0_seq1.path1;Name=comp81903_c0_seq1;Dir=indeterminatecoverage=99.3;identity=100.0;matches=565;mismatches=0;indels=0;unknowns=0;Target=comp81903_c0_seq1 567 3 .;CDS_Target=comp81903_c0_seq1 161 69 .;locus=RLOC_00005434
Chr1	stalkie_big_nohaplotig	exon	6873250	6873814	100	-	.	Parent=comp81903_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6873656	6873748	.	-	0	Parent=comp81903_c0_seq1.mrna1
Chr1	gffcl	locus	6903230	6907223	.	+	.	ID=RLOC_00005435;geneIDs=FBgn0036732.1.path1,comp150247_c0_seq1.path1;transcripts=FBgn0036732.1.mrna1,comp150247_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6903230	6907223	.	+	.	ID=FBgn0036732.1.mrna1;geneID=FBgn0036732.1.path1;Name=FBgn0036732.1;Dir=sensecoverage=100.0;identity=100.0;matches=2697;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005435
Chr1	stalkie_big_nohaplotig	exon	6903230	6904409	100	+	.	Parent=FBgn0036732.1.mrna1;Target=FBgn0036732.1 1 1180 +
Chr1	stalkie_big_nohaplotig	exon	6904472	6904945	100	+	.	Parent=FBgn0036732.1.mrna1;Target=FBgn0036732.1 1181 1654 +
Chr1	stalkie_big_nohaplotig	exon	6905016	6905379	100	+	.	Parent=FBgn0036732.1.mrna1;Target=FBgn0036732.1 1655 2018 +
Chr1	stalkie_big_nohaplotig	exon	6906352	6906539	100	+	.	Parent=FBgn0036732.1.mrna1;Target=FBgn0036732.1 2019 2206 +
Chr1	stalkie_big_nohaplotig	exon	6906603	6906764	100	+	.	Parent=FBgn0036732.1.mrna1;Target=FBgn0036732.1 2207 2368 +
Chr1	stalkie_big_nohaplotig	exon	6906840	6907016	100	+	.	Parent=FBgn0036732.1.mrna1;Target=FBgn0036732.1 2369 2545 +
Chr1	stalkie_big_nohaplotig	exon	6907072	6907223	100	+	.	Parent=FBgn0036732.1.mrna1;Target=FBgn0036732.1 2546 2697 +
Chr1	stalkie_big_nohaplotig	CDS	6903230	6904409	.	+	0	Parent=FBgn0036732.1.mrna1;Target=FBgn0036732.1 1 1180 +
Chr1	stalkie_big_nohaplotig	CDS	6904472	6904945	.	+	2	Parent=FBgn0036732.1.mrna1;Target=FBgn0036732.1 1181 1654 +
Chr1	stalkie_big_nohaplotig	CDS	6905016	6905379	.	+	2	Parent=FBgn0036732.1.mrna1;Target=FBgn0036732.1 1655 2018 +
Chr1	stalkie_big_nohaplotig	CDS	6906352	6906539	.	+	1	Parent=FBgn0036732.1.mrna1;Target=FBgn0036732.1 2019 2206 +
Chr1	stalkie_big_nohaplotig	CDS	6906603	6906764	.	+	2	Parent=FBgn0036732.1.mrna1;Target=FBgn0036732.1 2207 2368 +
Chr1	stalkie_big_nohaplotig	CDS	6906840	6907016	.	+	2	Parent=FBgn0036732.1.mrna1;Target=FBgn0036732.1 2369 2545 +
Chr1	stalkie_big_nohaplotig	CDS	6907072	6907223	.	+	2	Parent=FBgn0036732.1.mrna1;Target=FBgn0036732.1 2546 2697 +
Chr1	stalkie_big_nohaplotig	mRNA	6905356	6905942	.	+	.	ID=comp150247_c0_seq1.mrna1;geneID=comp150247_c0_seq1.path1;Name=comp150247_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.0;matches=586;mismatches=1;indels=5;unknowns=0;Target=comp150247_c0_seq1 592 1 .;CDS_Target=comp150247_c0_seq1 89 3 .;locus=RLOC_00005435
Chr1	stalkie_big_nohaplotig	exon	6905356	6905942	98	+	.	Parent=comp150247_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6905358	6905444	.	+	0	Parent=comp150247_c0_seq1.mrna1
Chr1	gffcl	locus	6911558	6913231	.	-	.	ID=RLOC_00005436;geneIDs=FBgn0036733.1.path1;transcripts=FBgn0036733.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6911558	6913231	.	-	.	ID=FBgn0036733.1.mrna1;geneID=FBgn0036733.1.path1;Name=FBgn0036733.1;Dir=sensecoverage=100.0;identity=99.7;matches=1612;mismatches=5;indels=0;unknowns=0;locus=RLOC_00005436
Chr1	stalkie_big_nohaplotig	exon	6911558	6911937	98	-	.	Parent=FBgn0036733.1.mrna1;Target=FBgn0036733.1 1238 1617 +
Chr1	stalkie_big_nohaplotig	exon	6911995	6913231	100	-	.	Parent=FBgn0036733.1.mrna1;Target=FBgn0036733.1 1 1237 +
Chr1	stalkie_big_nohaplotig	CDS	6911558	6911937	.	-	2	Parent=FBgn0036733.1.mrna1;Target=FBgn0036733.1 1238 1617 +
Chr1	stalkie_big_nohaplotig	CDS	6911995	6913231	.	-	0	Parent=FBgn0036733.1.mrna1;Target=FBgn0036733.1 1 1237 +
Chr1	gffcl	locus	6915444	6918934	.	+	.	ID=RLOC_00005437;geneIDs=FBgn0036735.1.path1;transcripts=FBgn0036735.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6915444	6918934	.	+	.	ID=FBgn0036735.1.mrna1;geneID=FBgn0036735.1.path1;Name=FBgn0036735.1;Dir=sensecoverage=100.0;identity=100.0;matches=1911;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005437
Chr1	stalkie_big_nohaplotig	exon	6915444	6915970	100	+	.	Parent=FBgn0036735.1.mrna1;Target=FBgn0036735.1 1 527 +
Chr1	stalkie_big_nohaplotig	exon	6916542	6917242	100	+	.	Parent=FBgn0036735.1.mrna1;Target=FBgn0036735.1 528 1228 +
Chr1	stalkie_big_nohaplotig	exon	6917303	6917525	100	+	.	Parent=FBgn0036735.1.mrna1;Target=FBgn0036735.1 1229 1451 +
Chr1	stalkie_big_nohaplotig	exon	6917588	6917739	100	+	.	Parent=FBgn0036735.1.mrna1;Target=FBgn0036735.1 1452 1603 +
Chr1	stalkie_big_nohaplotig	exon	6918566	6918650	100	+	.	Parent=FBgn0036735.1.mrna1;Target=FBgn0036735.1 1604 1688 +
Chr1	stalkie_big_nohaplotig	exon	6918712	6918934	100	+	.	Parent=FBgn0036735.1.mrna1;Target=FBgn0036735.1 1689 1911 +
Chr1	stalkie_big_nohaplotig	CDS	6915444	6915970	.	+	0	Parent=FBgn0036735.1.mrna1;Target=FBgn0036735.1 1 527 +
Chr1	stalkie_big_nohaplotig	CDS	6916542	6917242	.	+	1	Parent=FBgn0036735.1.mrna1;Target=FBgn0036735.1 528 1228 +
Chr1	stalkie_big_nohaplotig	CDS	6917303	6917525	.	+	2	Parent=FBgn0036735.1.mrna1;Target=FBgn0036735.1 1229 1451 +
Chr1	stalkie_big_nohaplotig	CDS	6917588	6917739	.	+	1	Parent=FBgn0036735.1.mrna1;Target=FBgn0036735.1 1452 1603 +
Chr1	stalkie_big_nohaplotig	CDS	6918566	6918650	.	+	2	Parent=FBgn0036735.1.mrna1;Target=FBgn0036735.1 1604 1688 +
Chr1	stalkie_big_nohaplotig	CDS	6918712	6918934	.	+	1	Parent=FBgn0036735.1.mrna1;Target=FBgn0036735.1 1689 1911 +
Chr1	gffcl	locus	6922708	6924635	.	+	.	ID=RLOC_00005438;geneIDs=comp160615_c0_seq1.path1;transcripts=comp160615_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6922708	6924635	.	+	.	ID=comp160615_c0_seq1.mrna1;geneID=comp160615_c0_seq1.path1;Name=comp160615_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.3;matches=1915;mismatches=12;indels=2;unknowns=0;Target=comp160615_c0_seq1 1928 1 .;CDS_Target=comp160615_c0_seq1 247 101 .;locus=RLOC_00005438
Chr1	stalkie_big_nohaplotig	exon	6922708	6924635	99	+	.	Parent=comp160615_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6922808	6922954	.	+	0	Parent=comp160615_c0_seq1.mrna1
Chr1	gffcl	locus	6925324	6925912	.	+	.	ID=RLOC_00005439;geneIDs=comp147779_c0_seq1.path1;transcripts=comp147779_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6925324	6925912	.	+	.	ID=comp147779_c0_seq1.mrna1;geneID=comp147779_c0_seq1.path1;Name=comp147779_c0_seq1;Dir=indeterminatecoverage=94.7;identity=99.8;matches=588;mismatches=1;indels=0;unknowns=0;Target=comp147779_c0_seq1 607 19 .;CDS_Target=comp147779_c0_seq1 425 231 .;locus=RLOC_00005439
Chr1	stalkie_big_nohaplotig	exon	6925324	6925912	99	+	.	Parent=comp147779_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6925536	6925730	.	+	0	Parent=comp147779_c0_seq1.mrna1
Chr1	gffcl	locus	6927326	6928387	.	-	.	ID=RLOC_00005440;geneIDs=FBgn0036734.1.path1;transcripts=FBgn0036734.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6927326	6928387	.	-	.	ID=FBgn0036734.1.mrna1;geneID=FBgn0036734.1.path1;Name=FBgn0036734.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1062;mismatches=0;indels=0;unknowns=0;Target=FBgn0036734.1 1062 1 .;locus=RLOC_00005440
Chr1	stalkie_big_nohaplotig	exon	6927326	6928387	100	-	.	Parent=FBgn0036734.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6927326	6928387	.	-	0	Parent=FBgn0036734.1.mrna1
Chr1	gffcl	locus	6931046	6969780	.	+	.	ID=RLOC_00005441;geneIDs=FBgn0259174.1.path1,comp153799_c0_seq1.path1;transcripts=FBgn0259174.1.mrna1,comp153799_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6931046	6969780	.	+	.	ID=FBgn0259174.1.mrna1;geneID=FBgn0259174.1.path1;Name=FBgn0259174.1;Dir=sensecoverage=100.0;identity=99.9;matches=2512;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005441
Chr1	stalkie_big_nohaplotig	exon	6931046	6931258	99	+	.	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 1 213 +
Chr1	stalkie_big_nohaplotig	exon	6960147	6960229	100	+	.	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 214 296 +
Chr1	stalkie_big_nohaplotig	exon	6960285	6960366	100	+	.	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 297 378 +
Chr1	stalkie_big_nohaplotig	exon	6960435	6960473	100	+	.	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 379 417 +
Chr1	stalkie_big_nohaplotig	exon	6961894	6962063	100	+	.	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 418 587 +
Chr1	stalkie_big_nohaplotig	exon	6962595	6962733	100	+	.	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 588 726 +
Chr1	stalkie_big_nohaplotig	exon	6962819	6962946	100	+	.	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 727 854 +
Chr1	stalkie_big_nohaplotig	exon	6963002	6963104	100	+	.	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 855 957 +
Chr1	stalkie_big_nohaplotig	exon	6966422	6966523	99	+	.	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 958 1059 +
Chr1	stalkie_big_nohaplotig	exon	6966680	6966917	100	+	.	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 1060 1297 +
Chr1	stalkie_big_nohaplotig	exon	6966983	6967107	100	+	.	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 1298 1422 +
Chr1	stalkie_big_nohaplotig	exon	6967172	6967313	100	+	.	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 1423 1564 +
Chr1	stalkie_big_nohaplotig	exon	6967750	6967906	100	+	.	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 1565 1721 +
Chr1	stalkie_big_nohaplotig	exon	6967978	6968271	100	+	.	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 1722 2015 +
Chr1	stalkie_big_nohaplotig	exon	6969224	6969622	100	+	.	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 2016 2414 +
Chr1	stalkie_big_nohaplotig	exon	6969681	6969780	100	+	.	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 2415 2514 +
Chr1	stalkie_big_nohaplotig	CDS	6931046	6931258	.	+	0	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 1 213 +
Chr1	stalkie_big_nohaplotig	CDS	6960147	6960229	.	+	0	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 214 296 +
Chr1	stalkie_big_nohaplotig	CDS	6960285	6960366	.	+	1	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 297 378 +
Chr1	stalkie_big_nohaplotig	CDS	6960435	6960473	.	+	0	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 379 417 +
Chr1	stalkie_big_nohaplotig	CDS	6961894	6962063	.	+	0	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 418 587 +
Chr1	stalkie_big_nohaplotig	CDS	6962595	6962733	.	+	1	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 588 726 +
Chr1	stalkie_big_nohaplotig	CDS	6962819	6962946	.	+	0	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 727 854 +
Chr1	stalkie_big_nohaplotig	CDS	6963002	6963104	.	+	1	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 855 957 +
Chr1	stalkie_big_nohaplotig	CDS	6966422	6966523	.	+	0	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 958 1059 +
Chr1	stalkie_big_nohaplotig	CDS	6966680	6966917	.	+	0	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 1060 1297 +
Chr1	stalkie_big_nohaplotig	CDS	6966983	6967107	.	+	2	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 1298 1422 +
Chr1	stalkie_big_nohaplotig	CDS	6967172	6967313	.	+	0	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 1423 1564 +
Chr1	stalkie_big_nohaplotig	CDS	6967750	6967906	.	+	2	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 1565 1721 +
Chr1	stalkie_big_nohaplotig	CDS	6967978	6968271	.	+	1	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 1722 2015 +
Chr1	stalkie_big_nohaplotig	CDS	6969224	6969622	.	+	1	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 2016 2414 +
Chr1	stalkie_big_nohaplotig	CDS	6969681	6969780	.	+	1	Parent=FBgn0259174.1.mrna1;Target=FBgn0259174.1 2415 2514 +
Chr1	stalkie_big_nohaplotig	mRNA	6963082	6964076	.	+	.	ID=comp153799_c0_seq1.mrna1;geneID=comp153799_c0_seq1.path1;Name=comp153799_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=994;mismatches=1;indels=0;unknowns=0;Target=comp153799_c0_seq1 995 1 .;CDS_Target=comp153799_c0_seq1 720 397 .;locus=RLOC_00005441
Chr1	stalkie_big_nohaplotig	exon	6963082	6964076	99	+	.	Parent=comp153799_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6963478	6963801	.	+	0	Parent=comp153799_c0_seq1.mrna1
Chr1	gffcl	locus	6936908	6937613	.	+	.	ID=RLOC_00005442;geneIDs=comp135238_c0_seq1.path1;transcripts=comp135238_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6936908	6937613	.	+	.	ID=comp135238_c0_seq1.mrna1;geneID=comp135238_c0_seq1.path1;Name=comp135238_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=706;mismatches=0;indels=0;unknowns=0;Target=comp135238_c0_seq1 706 1 .;CDS_Target=comp135238_c0_seq1 77 3 .;locus=RLOC_00005442
Chr1	stalkie_big_nohaplotig	exon	6936908	6937613	100	+	.	Parent=comp135238_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	6936910	6936984	.	+	0	Parent=comp135238_c0_seq1.mrna1
Chr1	gffcl	locus	6942108	6944861	.	-	.	ID=RLOC_00005443;geneIDs=comp144065_c0_seq1.path1;transcripts=comp144065_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6942108	6944861	.	-	.	ID=comp144065_c0_seq1.mrna1;geneID=comp144065_c0_seq1.path1;Name=comp144065_c0_seq1;Dir=sensecoverage=99.9;identity=99.7;matches=1130;mismatches=3;indels=0;unknowns=0;Target=comp144065_c0_seq1 491 601 +;locus=RLOC_00005443
Chr1	stalkie_big_nohaplotig	exon	6942108	6943015	100	-	.	Parent=comp144065_c0_seq1.mrna1;Target=comp144065_c0_seq1 227 1134 +
Chr1	stalkie_big_nohaplotig	exon	6944474	6944620	97	-	.	Parent=comp144065_c0_seq1.mrna1;Target=comp144065_c0_seq1 80 226 +
Chr1	stalkie_big_nohaplotig	exon	6944784	6944861	100	-	.	Parent=comp144065_c0_seq1.mrna1;Target=comp144065_c0_seq1 2 79 +
Chr1	stalkie_big_nohaplotig	CDS	6942641	6942751	.	-	0	Parent=comp144065_c0_seq1.mrna1
Chr1	gffcl	locus	6973399	6974361	.	-	.	ID=RLOC_00005444;geneIDs=FBgn0023197.1.path1;transcripts=FBgn0023197.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6973399	6974361	.	-	.	ID=FBgn0023197.1.mrna1;geneID=FBgn0023197.1.path1;Name=FBgn0023197.1;Dir=sensecoverage=100.0;identity=99.9;matches=830;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005444
Chr1	stalkie_big_nohaplotig	exon	6973399	6973709	99	-	.	Parent=FBgn0023197.1.mrna1;Target=FBgn0023197.1 521 831 +
Chr1	stalkie_big_nohaplotig	exon	6973778	6974040	100	-	.	Parent=FBgn0023197.1.mrna1;Target=FBgn0023197.1 258 520 +
Chr1	stalkie_big_nohaplotig	exon	6974105	6974361	100	-	.	Parent=FBgn0023197.1.mrna1;Target=FBgn0023197.1 1 257 +
Chr1	stalkie_big_nohaplotig	CDS	6973399	6973709	.	-	2	Parent=FBgn0023197.1.mrna1;Target=FBgn0023197.1 521 831 +
Chr1	stalkie_big_nohaplotig	CDS	6973778	6974040	.	-	1	Parent=FBgn0023197.1.mrna1;Target=FBgn0023197.1 258 520 +
Chr1	stalkie_big_nohaplotig	CDS	6974105	6974361	.	-	0	Parent=FBgn0023197.1.mrna1;Target=FBgn0023197.1 1 257 +
Chr1	gffcl	locus	6984899	6985526	.	+	.	ID=RLOC_00005446;geneIDs=FBgn0035670.2.path1;transcripts=FBgn0035670.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6984899	6985526	.	+	.	ID=FBgn0035670.2.mrna1;geneID=FBgn0035670.2.path1;Name=FBgn0035670.2;Dir=sensecoverage=100.0;identity=99.6;matches=568;mismatches=1;indels=1;unknowns=0;Target=FBgn0035670.2 3 83 +;locus=RLOC_00005446
Chr1	stalkie_big_nohaplotig	exon	6984899	6985072	99	+	.	Parent=FBgn0035670.2.mrna1;Target=FBgn0035670.2 1 175 +
Chr1	stalkie_big_nohaplotig	exon	6985132	6985526	99	+	.	Parent=FBgn0035670.2.mrna1;Target=FBgn0035670.2 176 570 +
Chr1	stalkie_big_nohaplotig	CDS	6984901	6984980	.	+	0	Parent=FBgn0035670.2.mrna1
Chr1	gffcl	locus	6987445	6988373	.	+	.	ID=RLOC_00005447;geneIDs=FBgn0250815.4.path1;transcripts=FBgn0250815.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6987445	6988373	.	+	.	ID=FBgn0250815.4.mrna1;geneID=FBgn0250815.4.path1;Name=FBgn0250815.4;Dir=sensecoverage=97.8;identity=98.4;matches=849;mismatches=14;indels=0;unknowns=0;locus=RLOC_00005447
Chr1	stalkie_big_nohaplotig	exon	6987445	6987742	98	+	.	Parent=FBgn0250815.4.mrna1;Target=FBgn0250815.4 20 317 +
Chr1	stalkie_big_nohaplotig	exon	6987809	6988373	98	+	.	Parent=FBgn0250815.4.mrna1;Target=FBgn0250815.4 318 882 +
Chr1	stalkie_big_nohaplotig	CDS	6987447	6987742	.	+	0	Parent=FBgn0250815.4.mrna1;Target=FBgn0250815.4 22 317 +
Chr1	stalkie_big_nohaplotig	CDS	6987809	6988373	.	+	1	Parent=FBgn0250815.4.mrna1;Target=FBgn0250815.4 318 882 +
Chr1	gffcl	locus	6996933	6998097	.	+	.	ID=RLOC_00005448;geneIDs=FBgn0035670.1.path1;transcripts=FBgn0035670.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	6996933	6998097	.	+	.	ID=FBgn0035670.1.mrna1;geneID=FBgn0035670.1.path1;Name=FBgn0035670.1;Dir=sensecoverage=100.0;identity=100.0;matches=903;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005448
Chr1	stalkie_big_nohaplotig	exon	6996933	6997246	100	+	.	Parent=FBgn0035670.1.mrna1;Target=FBgn0035670.1 1 314 +
Chr1	stalkie_big_nohaplotig	exon	6997315	6997490	100	+	.	Parent=FBgn0035670.1.mrna1;Target=FBgn0035670.1 315 490 +
Chr1	stalkie_big_nohaplotig	exon	6997570	6997674	100	+	.	Parent=FBgn0035670.1.mrna1;Target=FBgn0035670.1 491 595 +
Chr1	stalkie_big_nohaplotig	exon	6997790	6998097	100	+	.	Parent=FBgn0035670.1.mrna1;Target=FBgn0035670.1 596 903 +
Chr1	stalkie_big_nohaplotig	CDS	6996933	6997246	.	+	0	Parent=FBgn0035670.1.mrna1;Target=FBgn0035670.1 1 314 +
Chr1	stalkie_big_nohaplotig	CDS	6997315	6997490	.	+	1	Parent=FBgn0035670.1.mrna1;Target=FBgn0035670.1 315 490 +
Chr1	stalkie_big_nohaplotig	CDS	6997570	6997674	.	+	2	Parent=FBgn0035670.1.mrna1;Target=FBgn0035670.1 491 595 +
Chr1	stalkie_big_nohaplotig	CDS	6997790	6998097	.	+	2	Parent=FBgn0035670.1.mrna1;Target=FBgn0035670.1 596 903 +
Chr1	gffcl	locus	7010269	7021863	.	-	.	ID=RLOC_00005449;geneIDs=FBgn0035669.path1,comp146004_c0_seq1.path1,comp159281_c0_seq1.path1;transcripts=FBgn0035669.mrna1,comp159281_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7010269	7020737	.	-	.	ID=FBgn0035669.mrna1;geneID=FBgn0035669.path1;Name=FBgn0035669;Dir=sensecoverage=100.0;identity=100.0;matches=618;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005449
Chr1	stalkie_big_nohaplotig	exon	7010269	7010873	100	-	.	Parent=FBgn0035669.mrna1;Target=FBgn0035669 14 618 +
Chr1	stalkie_big_nohaplotig	exon	7020725	7020737	100	-	.	Parent=FBgn0035669.mrna1;Target=FBgn0035669 1 13 +
Chr1	stalkie_big_nohaplotig	CDS	7010269	7010873	.	-	2	Parent=FBgn0035669.mrna1;Target=FBgn0035669 14 618 +
Chr1	stalkie_big_nohaplotig	CDS	7020725	7020737	.	-	0	Parent=FBgn0035669.mrna1;Target=FBgn0035669 1 13 +
Chr1	stalkie_big_nohaplotig	mRNA	7019044	7021863	.	-	.	ID=comp159281_c0_seq1.mrna1;geneID=comp159281_c0_seq1.path1;Name=comp159281_c0_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=2741;mismatches=23;indels=1;unknowns=0;locus=RLOC_00005449
Chr1	stalkie_big_nohaplotig	exon	7019044	7021664	99	-	.	Parent=comp159281_c0_seq1.mrna1;Target=comp159281_c0_seq1 1 2622 -
Chr1	stalkie_big_nohaplotig	exon	7021721	7021863	100	-	.	Parent=comp159281_c0_seq1.mrna1;Target=comp159281_c0_seq1 2623 2765 -
Chr1	stalkie_big_nohaplotig	CDS	7020869	7021664	.	-	1	Parent=comp159281_c0_seq1.mrna1;Target=comp159281_c0_seq1 1827 2622 .
Chr1	stalkie_big_nohaplotig	CDS	7021721	7021791	.	-	0	Parent=comp159281_c0_seq1.mrna1;Target=comp159281_c0_seq1 2623 2693 .
Chr1	gffcl	locus	7029908	7030924	.	-	.	ID=RLOC_00005450;geneIDs=FBgn0035661.1.path1;transcripts=FBgn0035661.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7029908	7030924	.	-	.	ID=FBgn0035661.1.mrna1;geneID=FBgn0035661.1.path1;Name=FBgn0035661.1;Dir=sensecoverage=99.8;identity=99.8;matches=839;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005450
Chr1	stalkie_big_nohaplotig	exon	7029908	7030206	99	-	.	Parent=FBgn0035661.1.mrna1;Target=FBgn0035661.1 545 843 +
Chr1	stalkie_big_nohaplotig	exon	7030273	7030532	100	-	.	Parent=FBgn0035661.1.mrna1;Target=FBgn0035661.1 285 544 +
Chr1	stalkie_big_nohaplotig	exon	7030643	7030924	100	-	.	Parent=FBgn0035661.1.mrna1;Target=FBgn0035661.1 3 284 +
Chr1	stalkie_big_nohaplotig	CDS	7029908	7030206	.	-	2	Parent=FBgn0035661.1.mrna1;Target=FBgn0035661.1 545 843 +
Chr1	stalkie_big_nohaplotig	CDS	7030273	7030532	.	-	1	Parent=FBgn0035661.1.mrna1;Target=FBgn0035661.1 285 544 +
Chr1	stalkie_big_nohaplotig	CDS	7030643	7030923	.	-	0	Parent=FBgn0035661.1.mrna1;Target=FBgn0035661.1 4 284 +
Chr1	gffcl	locus	7058323	7058871	.	-	.	ID=RLOC_00005451;geneIDs=comp134842_c0_seq1.path1;transcripts=comp134842_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7058323	7058871	.	-	.	ID=comp134842_c0_seq1.mrna1;geneID=comp134842_c0_seq1.path1;Name=comp134842_c0_seq1;Dir=sensecoverage=96.6;identity=100.0;matches=489;mismatches=0;indels=0;unknowns=0;Target=comp134842_c0_seq1 8 361 +;locus=RLOC_00005451
Chr1	stalkie_big_nohaplotig	exon	7058323	7058427	100	-	.	Parent=comp134842_c0_seq1.mrna1;Target=comp134842_c0_seq1 391 495 +
Chr1	stalkie_big_nohaplotig	exon	7058488	7058871	100	-	.	Parent=comp134842_c0_seq1.mrna1;Target=comp134842_c0_seq1 7 390 +
Chr1	stalkie_big_nohaplotig	CDS	7058517	7058870	.	-	0	Parent=comp134842_c0_seq1.mrna1
Chr1	gffcl	locus	7082515	7097142	.	-	.	ID=RLOC_00005452;geneIDs=FBgn0052406.1.path1;transcripts=FBgn0052406.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7082515	7097142	.	-	.	ID=FBgn0052406.1.mrna1;geneID=FBgn0052406.1.path1;Name=FBgn0052406.1;Dir=sensecoverage=99.9;identity=99.7;matches=914;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005452
Chr1	stalkie_big_nohaplotig	exon	7082515	7082684	100	-	.	Parent=FBgn0052406.1.mrna1;Target=FBgn0052406.1 749 918 +
Chr1	stalkie_big_nohaplotig	exon	7082753	7083068	99	-	.	Parent=FBgn0052406.1.mrna1;Target=FBgn0052406.1 433 748 +
Chr1	stalkie_big_nohaplotig	exon	7096137	7096239	100	-	.	Parent=FBgn0052406.1.mrna1;Target=FBgn0052406.1 330 432 +
Chr1	stalkie_big_nohaplotig	exon	7096815	7097142	99	-	.	Parent=FBgn0052406.1.mrna1;Target=FBgn0052406.1 2 329 +
Chr1	stalkie_big_nohaplotig	CDS	7082515	7082684	.	-	2	Parent=FBgn0052406.1.mrna1;Target=FBgn0052406.1 749 918 +
Chr1	stalkie_big_nohaplotig	CDS	7082753	7083068	.	-	0	Parent=FBgn0052406.1.mrna1;Target=FBgn0052406.1 433 748 +
Chr1	stalkie_big_nohaplotig	CDS	7096137	7096239	.	-	1	Parent=FBgn0052406.1.mrna1;Target=FBgn0052406.1 330 432 +
Chr1	stalkie_big_nohaplotig	CDS	7096815	7097140	.	-	0	Parent=FBgn0052406.1.mrna1;Target=FBgn0052406.1 4 329 +
Chr1	gffcl	locus	7103306	7103991	.	-	.	ID=RLOC_00005453;geneIDs=comp146668_c0_seq1.path1;transcripts=comp146668_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7103306	7103991	.	-	.	ID=comp146668_c0_seq1.mrna1;geneID=comp146668_c0_seq1.path1;Name=comp146668_c0_seq1;Dir=antisensecoverage=95.0;identity=98.6;matches=622;mismatches=8;indels=1;unknowns=0;Target=comp146668_c0_seq1 246 596 .;locus=RLOC_00005453
Chr1	stalkie_big_nohaplotig	exon	7103306	7103480	98	-	.	Parent=comp146668_c0_seq1.mrna1;Target=comp146668_c0_seq1 1 175 -
Chr1	stalkie_big_nohaplotig	exon	7103537	7103991	98	-	.	Parent=comp146668_c0_seq1.mrna1;Target=comp146668_c0_seq1 176 631 -
Chr1	stalkie_big_nohaplotig	CDS	7103606	7103956	.	-	0	Parent=comp146668_c0_seq1.mrna1
Chr1	gffcl	locus	7115250	7116693	.	+	.	ID=RLOC_00005454;geneIDs=comp135194_c0_seq1.path1;transcripts=comp135194_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7115250	7116693	.	+	.	ID=comp135194_c0_seq1.mrna1;geneID=comp135194_c0_seq1.path1;Name=comp135194_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=673;mismatches=0;indels=0;unknowns=0;Target=comp135194_c0_seq1 169 288 +;locus=RLOC_00005454
Chr1	stalkie_big_nohaplotig	exon	7115250	7115846	100	+	.	Parent=comp135194_c0_seq1.mrna1;Target=comp135194_c0_seq1 1 597 +
Chr1	stalkie_big_nohaplotig	exon	7116618	7116693	100	+	.	Parent=comp135194_c0_seq1.mrna1;Target=comp135194_c0_seq1 598 673 +
Chr1	stalkie_big_nohaplotig	CDS	7115418	7115537	.	+	0	Parent=comp135194_c0_seq1.mrna1
Chr1	gffcl	locus	7131790	7132304	.	-	.	ID=RLOC_00005455;geneIDs=comp135049_c0_seq1.path2;transcripts=comp135049_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	7131790	7132304	.	-	.	ID=comp135049_c0_seq1.mrna2;geneID=comp135049_c0_seq1.path2;Name=comp135049_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.0;matches=510;mismatches=5;indels=0;unknowns=0;Target=comp135049_c0_seq1 516 2 .;CDS_Target=comp135049_c0_seq1 385 56 .;locus=RLOC_00005455
Chr1	stalkie_big_nohaplotig	exon	7131790	7132304	99	-	.	Parent=comp135049_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	7131921	7132250	.	-	0	Parent=comp135049_c0_seq1.mrna2
Chr1	gffcl	locus	7150480	7150751	.	+	.	ID=RLOC_00005456;geneIDs=comp1450147_c0_seq1.path1;transcripts=comp1450147_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7150480	7150751	.	+	.	ID=comp1450147_c0_seq1.mrna1;geneID=comp1450147_c0_seq1.path1;Name=comp1450147_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.6;matches=271;mismatches=1;indels=0;unknowns=0;Target=comp1450147_c0_seq1 274 3 .;CDS_Target=comp1450147_c0_seq1 113 3 .;locus=RLOC_00005456
Chr1	stalkie_big_nohaplotig	exon	7150480	7150751	99	+	.	Parent=comp1450147_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	7150480	7150590	.	+	0	Parent=comp1450147_c0_seq1.mrna1
Chr1	gffcl	locus	7212261	7213592	.	-	.	ID=RLOC_00005457;geneIDs=FBgn0035656.1.path1;transcripts=FBgn0035656.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7212261	7213592	.	-	.	ID=FBgn0035656.1.mrna1;geneID=FBgn0035656.1.path1;Name=FBgn0035656.1;Dir=sensecoverage=91.5;identity=100.0;matches=1266;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005457
Chr1	stalkie_big_nohaplotig	exon	7212261	7213010	100	-	.	Parent=FBgn0035656.1.mrna1;Target=FBgn0035656.1 634 1383 +
Chr1	stalkie_big_nohaplotig	exon	7213077	7213592	100	-	.	Parent=FBgn0035656.1.mrna1;Target=FBgn0035656.1 118 633 +
Chr1	stalkie_big_nohaplotig	CDS	7212261	7213010	.	-	0	Parent=FBgn0035656.1.mrna1;Target=FBgn0035656.1 634 1383 +
Chr1	stalkie_big_nohaplotig	CDS	7213077	7213592	.	-	0	Parent=FBgn0035656.1.mrna1;Target=FBgn0035656.1 118 633 +
Chr1	gffcl	locus	7276002	7277005	.	+	.	ID=RLOC_00005458;geneIDs=comp153983_c0_seq1.path1;transcripts=comp153983_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7276002	7277005	.	+	.	ID=comp153983_c0_seq1.mrna1;geneID=comp153983_c0_seq1.path1;Name=comp153983_c0_seq1;Dir=sensecoverage=99.8;identity=99.8;matches=839;mismatches=1;indels=1;unknowns=0;Target=comp153983_c0_seq1 108 359 +;locus=RLOC_00005458
Chr1	stalkie_big_nohaplotig	exon	7276002	7276383	99	+	.	Parent=comp153983_c0_seq1.mrna1;Target=comp153983_c0_seq1 1 383 +
Chr1	stalkie_big_nohaplotig	exon	7276430	7276645	100	+	.	Parent=comp153983_c0_seq1.mrna1;Target=comp153983_c0_seq1 384 599 +
Chr1	stalkie_big_nohaplotig	exon	7276764	7277005	100	+	.	Parent=comp153983_c0_seq1.mrna1;Target=comp153983_c0_seq1 600 841 +
Chr1	stalkie_big_nohaplotig	CDS	7276108	7276359	.	+	0	Parent=comp153983_c0_seq1.mrna1
Chr1	gffcl	locus	7297720	7298360	.	+	.	ID=RLOC_00005459;geneIDs=comp145719_c0_seq1.path1;transcripts=comp145719_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7297720	7298360	.	+	.	ID=comp145719_c0_seq1.mrna1;geneID=comp145719_c0_seq1.path1;Name=comp145719_c0_seq1;Dir=sensecoverage=96.9;identity=100.0;matches=539;mismatches=0;indels=0;unknowns=0;Target=comp145719_c0_seq1 125 457 +;locus=RLOC_00005459
Chr1	stalkie_big_nohaplotig	exon	7297720	7298190	100	+	.	Parent=comp145719_c0_seq1.mrna1;Target=comp145719_c0_seq1 18 488 +
Chr1	stalkie_big_nohaplotig	exon	7298293	7298360	100	+	.	Parent=comp145719_c0_seq1.mrna1;Target=comp145719_c0_seq1 489 556 +
Chr1	stalkie_big_nohaplotig	CDS	7297827	7298159	.	+	0	Parent=comp145719_c0_seq1.mrna1
Chr1	gffcl	locus	7313562	7314577	.	-	.	ID=RLOC_00005460;geneIDs=comp145466_c0_seq1.path1;transcripts=comp145466_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7313562	7314577	.	-	.	ID=comp145466_c0_seq1.mrna1;geneID=comp145466_c0_seq1.path1;Name=comp145466_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=983;mismatches=33;indels=1;unknowns=0;Target=comp145466_c0_seq1 1017 1 .;CDS_Target=comp145466_c0_seq1 1015 812 .;locus=RLOC_00005460
Chr1	stalkie_big_nohaplotig	exon	7313562	7314577	96	-	.	Parent=comp145466_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	7313564	7313767	.	-	0	Parent=comp145466_c0_seq1.mrna1
Chr1	gffcl	locus	7315009	7315627	.	+	.	ID=RLOC_00005461;geneIDs=comp58623_c0_seq1.path1;transcripts=comp58623_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7315009	7315627	.	+	.	ID=comp58623_c0_seq1.mrna1;geneID=comp58623_c0_seq1.path1;Name=comp58623_c0_seq1;Dir=antisensecoverage=98.2;identity=100.0;matches=539;mismatches=0;indels=0;unknowns=0;Target=comp58623_c0_seq1 107 442 .;locus=RLOC_00005461
Chr1	stalkie_big_nohaplotig	exon	7315009	7315458	100	+	.	Parent=comp58623_c0_seq1.mrna1;Target=comp58623_c0_seq1 91 540 -
Chr1	stalkie_big_nohaplotig	exon	7315539	7315627	100	+	.	Parent=comp58623_c0_seq1.mrna1;Target=comp58623_c0_seq1 2 90 -
Chr1	stalkie_big_nohaplotig	CDS	7315107	7315442	.	+	0	Parent=comp58623_c0_seq1.mrna1
Chr1	gffcl	locus	7351220	7352486	.	-	.	ID=RLOC_00005462;geneIDs=comp156490_c0_seq1.path1;transcripts=comp156490_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7351220	7352486	.	-	.	ID=comp156490_c0_seq1.mrna1;geneID=comp156490_c0_seq1.path1;Name=comp156490_c0_seq1;Dir=antisensecoverage=93.1;identity=98.9;matches=654;mismatches=7;indels=0;unknowns=0;Target=comp156490_c0_seq1 278 553 .;locus=RLOC_00005462
Chr1	stalkie_big_nohaplotig	exon	7351220	7351429	99	-	.	Parent=comp156490_c0_seq1.mrna1;Target=comp156490_c0_seq1 50 259 -
Chr1	stalkie_big_nohaplotig	exon	7351485	7351794	99	-	.	Parent=comp156490_c0_seq1.mrna1;Target=comp156490_c0_seq1 260 569 -
Chr1	stalkie_big_nohaplotig	exon	7352346	7352486	97	-	.	Parent=comp156490_c0_seq1.mrna1;Target=comp156490_c0_seq1 570 710 -
Chr1	stalkie_big_nohaplotig	CDS	7351503	7351778	.	-	0	Parent=comp156490_c0_seq1.mrna1
Chr1	gffcl	locus	7384111	7392278	.	+	.	ID=RLOC_00005463;geneIDs=FBgn0035398.1.path2;transcripts=FBgn0035398.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	7384111	7392278	.	+	.	ID=FBgn0035398.1.mrna2;geneID=FBgn0035398.1.path2;Name=FBgn0035398.1;Dir=sensecoverage=98.8;identity=99.9;matches=3035;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005463
Chr1	stalkie_big_nohaplotig	exon	7384111	7384192	100	+	.	Parent=FBgn0035398.1.mrna2;Target=FBgn0035398.1 37 118 +
Chr1	stalkie_big_nohaplotig	exon	7388082	7388593	100	+	.	Parent=FBgn0035398.1.mrna2;Target=FBgn0035398.1 119 630 +
Chr1	stalkie_big_nohaplotig	exon	7388666	7389167	99	+	.	Parent=FBgn0035398.1.mrna2;Target=FBgn0035398.1 631 1132 +
Chr1	stalkie_big_nohaplotig	exon	7389230	7389438	100	+	.	Parent=FBgn0035398.1.mrna2;Target=FBgn0035398.1 1133 1341 +
Chr1	stalkie_big_nohaplotig	exon	7389816	7390061	100	+	.	Parent=FBgn0035398.1.mrna2;Target=FBgn0035398.1 1342 1587 +
Chr1	stalkie_big_nohaplotig	exon	7390137	7390248	99	+	.	Parent=FBgn0035398.1.mrna2;Target=FBgn0035398.1 1588 1699 +
Chr1	stalkie_big_nohaplotig	exon	7390307	7391277	100	+	.	Parent=FBgn0035398.1.mrna2;Target=FBgn0035398.1 1700 2670 +
Chr1	stalkie_big_nohaplotig	exon	7391377	7391578	99	+	.	Parent=FBgn0035398.1.mrna2;Target=FBgn0035398.1 2671 2872 +
Chr1	stalkie_big_nohaplotig	exon	7392076	7392278	100	+	.	Parent=FBgn0035398.1.mrna2;Target=FBgn0035398.1 2873 3075 +
Chr1	stalkie_big_nohaplotig	CDS	7384111	7384192	.	+	0	Parent=FBgn0035398.1.mrna2;Target=FBgn0035398.1 37 118 +
Chr1	stalkie_big_nohaplotig	CDS	7388082	7388593	.	+	2	Parent=FBgn0035398.1.mrna2;Target=FBgn0035398.1 119 630 +
Chr1	stalkie_big_nohaplotig	CDS	7388666	7389167	.	+	0	Parent=FBgn0035398.1.mrna2;Target=FBgn0035398.1 631 1132 +
Chr1	stalkie_big_nohaplotig	CDS	7389230	7389438	.	+	2	Parent=FBgn0035398.1.mrna2;Target=FBgn0035398.1 1133 1341 +
Chr1	stalkie_big_nohaplotig	CDS	7389816	7390061	.	+	0	Parent=FBgn0035398.1.mrna2;Target=FBgn0035398.1 1342 1587 +
Chr1	stalkie_big_nohaplotig	CDS	7390137	7390248	.	+	0	Parent=FBgn0035398.1.mrna2;Target=FBgn0035398.1 1588 1699 +
Chr1	stalkie_big_nohaplotig	CDS	7390307	7391277	.	+	2	Parent=FBgn0035398.1.mrna2;Target=FBgn0035398.1 1700 2670 +
Chr1	stalkie_big_nohaplotig	CDS	7391377	7391578	.	+	0	Parent=FBgn0035398.1.mrna2;Target=FBgn0035398.1 2671 2872 +
Chr1	stalkie_big_nohaplotig	CDS	7392076	7392278	.	+	2	Parent=FBgn0035398.1.mrna2;Target=FBgn0035398.1 2873 3075 +
Chr1	gffcl	locus	7402913	7404142	.	-	.	ID=RLOC_00005464;geneIDs=FBgn0035768.1.path1;transcripts=FBgn0035768.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7402913	7404142	.	-	.	ID=FBgn0035768.1.mrna1;geneID=FBgn0035768.1.path1;Name=FBgn0035768.1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1215;mismatches=15;indels=0;unknowns=0;Target=FBgn0035768.1 1230 1 .;locus=RLOC_00005464
Chr1	stalkie_big_nohaplotig	exon	7402913	7404142	98	-	.	Parent=FBgn0035768.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	7402913	7404142	.	-	0	Parent=FBgn0035768.1.mrna1
Chr1	gffcl	locus	7405753	7406194	.	-	.	ID=RLOC_00005465;geneIDs=FBgn0015298.1.path1;transcripts=FBgn0015298.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7405753	7406194	.	-	.	ID=FBgn0015298.1.mrna1;geneID=FBgn0015298.1.path1;Name=FBgn0015298.1;Dir=sensecoverage=100.0;identity=99.7;matches=377;mismatches=0;indels=1;unknowns=0;Target=FBgn0015298.1 3 56 +;locus=RLOC_00005465
Chr1	stalkie_big_nohaplotig	exon	7405753	7405980	100	-	.	Parent=FBgn0015298.1.mrna1;Target=FBgn0015298.1 151 378 +
Chr1	stalkie_big_nohaplotig	exon	7406046	7406194	99	-	.	Parent=FBgn0015298.1.mrna1;Target=FBgn0015298.1 1 150 +
Chr1	stalkie_big_nohaplotig	CDS	7406140	7406192	.	-	0	Parent=FBgn0015298.1.mrna1
Chr1	gffcl	locus	7408250	7408566	.	-	.	ID=RLOC_00005466;geneIDs=comp116508_c0_seq1.path2;transcripts=comp116508_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	7408250	7408566	.	-	.	ID=comp116508_c0_seq1.mrna2;geneID=comp116508_c0_seq1.path2;Name=comp116508_c0_seq1;Dir=indeterminatecoverage=52.9;identity=99.7;matches=316;mismatches=1;indels=0;unknowns=0;Target=comp116508_c0_seq1 598 282 .;locus=RLOC_00005466
Chr1	stalkie_big_nohaplotig	exon	7408250	7408566	99	-	.	Parent=comp116508_c0_seq1.mrna2
Chr1	gffcl	locus	7408621	7421754	.	+	.	ID=RLOC_00005467;geneIDs=FBgn0019662.1.path1;transcripts=FBgn0019662.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7408621	7421754	.	+	.	ID=FBgn0019662.1.mrna1;geneID=FBgn0019662.1.path1;Name=FBgn0019662.1;Dir=sensecoverage=100.0;identity=99.6;matches=1004;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005467
Chr1	stalkie_big_nohaplotig	exon	7408621	7408710	100	+	.	Parent=FBgn0019662.1.mrna1;Target=FBgn0019662.1 1 90 +
Chr1	stalkie_big_nohaplotig	exon	7408811	7408965	100	+	.	Parent=FBgn0019662.1.mrna1;Target=FBgn0019662.1 91 245 +
Chr1	stalkie_big_nohaplotig	exon	7418809	7418953	100	+	.	Parent=FBgn0019662.1.mrna1;Target=FBgn0019662.1 246 390 +
Chr1	stalkie_big_nohaplotig	exon	7419027	7419287	99	+	.	Parent=FBgn0019662.1.mrna1;Target=FBgn0019662.1 391 651 +
Chr1	stalkie_big_nohaplotig	exon	7419354	7419456	98	+	.	Parent=FBgn0019662.1.mrna1;Target=FBgn0019662.1 652 754 +
Chr1	stalkie_big_nohaplotig	exon	7419735	7419862	100	+	.	Parent=FBgn0019662.1.mrna1;Target=FBgn0019662.1 755 882 +
Chr1	stalkie_big_nohaplotig	exon	7421629	7421754	99	+	.	Parent=FBgn0019662.1.mrna1;Target=FBgn0019662.1 883 1008 +
Chr1	stalkie_big_nohaplotig	CDS	7408621	7408710	.	+	0	Parent=FBgn0019662.1.mrna1;Target=FBgn0019662.1 1 90 +
Chr1	stalkie_big_nohaplotig	CDS	7408811	7408965	.	+	0	Parent=FBgn0019662.1.mrna1;Target=FBgn0019662.1 91 245 +
Chr1	stalkie_big_nohaplotig	CDS	7418809	7418953	.	+	1	Parent=FBgn0019662.1.mrna1;Target=FBgn0019662.1 246 390 +
Chr1	stalkie_big_nohaplotig	CDS	7419027	7419287	.	+	0	Parent=FBgn0019662.1.mrna1;Target=FBgn0019662.1 391 651 +
Chr1	stalkie_big_nohaplotig	CDS	7419354	7419456	.	+	0	Parent=FBgn0019662.1.mrna1;Target=FBgn0019662.1 652 754 +
Chr1	stalkie_big_nohaplotig	CDS	7419735	7419862	.	+	2	Parent=FBgn0019662.1.mrna1;Target=FBgn0019662.1 755 882 +
Chr1	stalkie_big_nohaplotig	CDS	7421629	7421754	.	+	0	Parent=FBgn0019662.1.mrna1;Target=FBgn0019662.1 883 1008 +
Chr1	gffcl	locus	7427717	7435112	.	-	.	ID=RLOC_00005468;geneIDs=FBgn0053993.1.path1;transcripts=FBgn0053993.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7427717	7435112	.	-	.	ID=FBgn0053993.1.mrna1;geneID=FBgn0053993.1.path1;Name=FBgn0053993.1;Dir=sensecoverage=100.0;identity=99.4;matches=1017;mismatches=6;indels=0;unknowns=0;locus=RLOC_00005468
Chr1	stalkie_big_nohaplotig	exon	7427717	7427929	99	-	.	Parent=FBgn0053993.1.mrna1;Target=FBgn0053993.1 811 1023 +
Chr1	stalkie_big_nohaplotig	exon	7428001	7428281	100	-	.	Parent=FBgn0053993.1.mrna1;Target=FBgn0053993.1 530 810 +
Chr1	stalkie_big_nohaplotig	exon	7428352	7428637	99	-	.	Parent=FBgn0053993.1.mrna1;Target=FBgn0053993.1 244 529 +
Chr1	stalkie_big_nohaplotig	exon	7434782	7434902	97	-	.	Parent=FBgn0053993.1.mrna1;Target=FBgn0053993.1 123 243 +
Chr1	stalkie_big_nohaplotig	exon	7434991	7435112	99	-	.	Parent=FBgn0053993.1.mrna1;Target=FBgn0053993.1 1 122 +
Chr1	stalkie_big_nohaplotig	CDS	7427717	7427929	.	-	0	Parent=FBgn0053993.1.mrna1;Target=FBgn0053993.1 811 1023 +
Chr1	stalkie_big_nohaplotig	CDS	7428001	7428281	.	-	2	Parent=FBgn0053993.1.mrna1;Target=FBgn0053993.1 530 810 +
Chr1	stalkie_big_nohaplotig	CDS	7428352	7428637	.	-	0	Parent=FBgn0053993.1.mrna1;Target=FBgn0053993.1 244 529 +
Chr1	stalkie_big_nohaplotig	CDS	7434782	7434902	.	-	1	Parent=FBgn0053993.1.mrna1;Target=FBgn0053993.1 123 243 +
Chr1	stalkie_big_nohaplotig	CDS	7434991	7435112	.	-	0	Parent=FBgn0053993.1.mrna1;Target=FBgn0053993.1 1 122 +
Chr1	gffcl	locus	7529609	7529644	.	-	.	ID=RLOC_00005469;geneIDs=FBgn0035398.1.path1;transcripts=FBgn0035398.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7529609	7529644	.	-	.	ID=FBgn0035398.1.mrna1;geneID=FBgn0035398.1.path1;Name=FBgn0035398.1;Dir=indeterminatecoverage=1.2;identity=100.0;matches=36;mismatches=0;indels=0;unknowns=0;Target=FBgn0035398.1 36 1 .;locus=RLOC_00005469
Chr1	stalkie_big_nohaplotig	exon	7529609	7529644	100	-	.	Parent=FBgn0035398.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	7529609	7529644	.	-	0	Parent=FBgn0035398.1.mrna1
Chr1	gffcl	locus	7547253	7547751	.	-	.	ID=RLOC_00005470;geneIDs=comp148789_c0_seq1.path1;transcripts=comp148789_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7547253	7547751	.	-	.	ID=comp148789_c0_seq1.mrna1;geneID=comp148789_c0_seq1.path1;Name=comp148789_c0_seq1;Dir=indeterminatecoverage=95.0;identity=99.8;matches=498;mismatches=1;indels=0;unknowns=0;Target=comp148789_c0_seq1 499 1 .;CDS_Target=comp148789_c0_seq1 386 291 .;locus=RLOC_00005470
Chr1	stalkie_big_nohaplotig	exon	7547253	7547751	99	-	.	Parent=comp148789_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	7547366	7547461	.	-	0	Parent=comp148789_c0_seq1.mrna1
Chr1	gffcl	locus	7549286	7582245	.	-	.	ID=RLOC_00005471;geneIDs=FBgn0026189.1.path1,comp161122_c0_seq1.path2;transcripts=comp161122_c0_seq1.mrna2,FBgn0026189.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7549286	7582245	.	-	.	ID=comp161122_c0_seq1.mrna2;geneID=comp161122_c0_seq1.path2;Name=comp161122_c0_seq1;Dir=sensecoverage=92.3;identity=99.8;matches=4795;mismatches=1;indels=8;unknowns=0;locus=RLOC_00005471
Chr1	stalkie_big_nohaplotig	exon	7549286	7550906	99	-	.	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 3580 5204 +
Chr1	stalkie_big_nohaplotig	exon	7554855	7554915	100	-	.	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 3519 3579 +
Chr1	stalkie_big_nohaplotig	exon	7555309	7555449	100	-	.	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 3378 3518 +
Chr1	stalkie_big_nohaplotig	exon	7556172	7556222	100	-	.	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 3327 3377 +
Chr1	stalkie_big_nohaplotig	exon	7557089	7557210	100	-	.	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 3205 3326 +
Chr1	stalkie_big_nohaplotig	exon	7557271	7558126	100	-	.	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 2349 3204 +
Chr1	stalkie_big_nohaplotig	exon	7558191	7558295	100	-	.	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 2244 2348 +
Chr1	stalkie_big_nohaplotig	exon	7558361	7558470	100	-	.	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 2134 2243 +
Chr1	stalkie_big_nohaplotig	exon	7558537	7558706	100	-	.	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 1964 2133 +
Chr1	stalkie_big_nohaplotig	exon	7558778	7558943	100	-	.	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 1798 1963 +
Chr1	stalkie_big_nohaplotig	exon	7560743	7560867	100	-	.	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 1673 1797 +
Chr1	stalkie_big_nohaplotig	exon	7560928	7561092	100	-	.	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 1508 1672 +
Chr1	stalkie_big_nohaplotig	exon	7561566	7561753	100	-	.	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 1320 1507 +
Chr1	stalkie_big_nohaplotig	exon	7561880	7562008	100	-	.	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 1191 1319 +
Chr1	stalkie_big_nohaplotig	exon	7562109	7562253	100	-	.	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 1046 1190 +
Chr1	stalkie_big_nohaplotig	exon	7564490	7565121	100	-	.	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 414 1045 +
Chr1	stalkie_big_nohaplotig	exon	7575763	7575771	100	-	.	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 405 413 +
Chr1	stalkie_big_nohaplotig	exon	7582244	7582245	100	-	.	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 403 404 +
Chr1	stalkie_big_nohaplotig	CDS	7554855	7554915	.	-	1	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 3519 3579 +
Chr1	stalkie_big_nohaplotig	CDS	7555309	7555449	.	-	1	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 3378 3518 +
Chr1	stalkie_big_nohaplotig	CDS	7556172	7556222	.	-	1	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 3327 3377 +
Chr1	stalkie_big_nohaplotig	CDS	7557089	7557210	.	-	0	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 3205 3326 +
Chr1	stalkie_big_nohaplotig	CDS	7557271	7558126	.	-	1	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 2349 3204 +
Chr1	stalkie_big_nohaplotig	CDS	7558191	7558295	.	-	1	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 2244 2348 +
Chr1	stalkie_big_nohaplotig	CDS	7558361	7558470	.	-	0	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 2134 2243 +
Chr1	stalkie_big_nohaplotig	CDS	7558537	7558706	.	-	2	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 1964 2133 +
Chr1	stalkie_big_nohaplotig	CDS	7558778	7558943	.	-	0	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 1798 1963 +
Chr1	stalkie_big_nohaplotig	CDS	7560743	7560867	.	-	2	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 1673 1797 +
Chr1	stalkie_big_nohaplotig	CDS	7560928	7561092	.	-	2	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 1508 1672 +
Chr1	stalkie_big_nohaplotig	CDS	7561566	7561753	.	-	1	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 1320 1507 +
Chr1	stalkie_big_nohaplotig	CDS	7561880	7562008	.	-	1	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 1191 1319 +
Chr1	stalkie_big_nohaplotig	CDS	7562109	7562253	.	-	2	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 1046 1190 +
Chr1	stalkie_big_nohaplotig	CDS	7564490	7564961	.	-	0	Parent=comp161122_c0_seq1.mrna2;Target=comp161122_c0_seq1 574 1045 +
Chr1	stalkie_big_nohaplotig	mRNA	7550798	7564964	.	-	.	ID=FBgn0026189.1.mrna1;geneID=FBgn0026189.1.path1;Name=FBgn0026189.1;Dir=sensecoverage=100.0;identity=100.0;matches=3057;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005471
Chr1	stalkie_big_nohaplotig	exon	7550798	7550906	100	-	.	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 2949 3057 +
Chr1	stalkie_big_nohaplotig	exon	7555309	7555449	100	-	.	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 2808 2948 +
Chr1	stalkie_big_nohaplotig	exon	7556172	7556222	100	-	.	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 2757 2807 +
Chr1	stalkie_big_nohaplotig	exon	7557089	7557210	100	-	.	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 2635 2756 +
Chr1	stalkie_big_nohaplotig	exon	7557271	7558126	100	-	.	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 1779 2634 +
Chr1	stalkie_big_nohaplotig	exon	7558191	7558295	100	-	.	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 1674 1778 +
Chr1	stalkie_big_nohaplotig	exon	7558361	7558470	100	-	.	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 1564 1673 +
Chr1	stalkie_big_nohaplotig	exon	7558537	7558706	100	-	.	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 1394 1563 +
Chr1	stalkie_big_nohaplotig	exon	7558778	7558943	100	-	.	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 1228 1393 +
Chr1	stalkie_big_nohaplotig	exon	7560743	7560867	100	-	.	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 1103 1227 +
Chr1	stalkie_big_nohaplotig	exon	7560928	7561092	100	-	.	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 938 1102 +
Chr1	stalkie_big_nohaplotig	exon	7561566	7561753	100	-	.	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 750 937 +
Chr1	stalkie_big_nohaplotig	exon	7561880	7562008	100	-	.	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 621 749 +
Chr1	stalkie_big_nohaplotig	exon	7562109	7562253	100	-	.	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 476 620 +
Chr1	stalkie_big_nohaplotig	exon	7564490	7564964	100	-	.	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 1 475 +
Chr1	stalkie_big_nohaplotig	CDS	7550798	7550906	.	-	1	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 2949 3057 +
Chr1	stalkie_big_nohaplotig	CDS	7555309	7555449	.	-	1	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 2808 2948 +
Chr1	stalkie_big_nohaplotig	CDS	7556172	7556222	.	-	1	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 2757 2807 +
Chr1	stalkie_big_nohaplotig	CDS	7557089	7557210	.	-	0	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 2635 2756 +
Chr1	stalkie_big_nohaplotig	CDS	7557271	7558126	.	-	1	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 1779 2634 +
Chr1	stalkie_big_nohaplotig	CDS	7558191	7558295	.	-	1	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 1674 1778 +
Chr1	stalkie_big_nohaplotig	CDS	7558361	7558470	.	-	0	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 1564 1673 +
Chr1	stalkie_big_nohaplotig	CDS	7558537	7558706	.	-	2	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 1394 1563 +
Chr1	stalkie_big_nohaplotig	CDS	7558778	7558943	.	-	0	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 1228 1393 +
Chr1	stalkie_big_nohaplotig	CDS	7560743	7560867	.	-	2	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 1103 1227 +
Chr1	stalkie_big_nohaplotig	CDS	7560928	7561092	.	-	2	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 938 1102 +
Chr1	stalkie_big_nohaplotig	CDS	7561566	7561753	.	-	1	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 750 937 +
Chr1	stalkie_big_nohaplotig	CDS	7561880	7562008	.	-	1	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 621 749 +
Chr1	stalkie_big_nohaplotig	CDS	7562109	7562253	.	-	2	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 476 620 +
Chr1	stalkie_big_nohaplotig	CDS	7564490	7564964	.	-	0	Parent=FBgn0026189.1.mrna1;Target=FBgn0026189.1 1 475 +
Chr1	gffcl	locus	7565858	7567311	.	+	.	ID=RLOC_00005472;geneIDs=FBgn0031261.1.path1;transcripts=FBgn0031261.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7565858	7567311	.	+	.	ID=FBgn0031261.1.mrna1;geneID=FBgn0031261.1.path1;Name=FBgn0031261.1;Dir=sensecoverage=100.0;identity=99.7;matches=1268;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005472
Chr1	stalkie_big_nohaplotig	exon	7565858	7565936	100	+	.	Parent=FBgn0031261.1.mrna1;Target=FBgn0031261.1 1 79 +
Chr1	stalkie_big_nohaplotig	exon	7566007	7566185	100	+	.	Parent=FBgn0031261.1.mrna1;Target=FBgn0031261.1 80 258 +
Chr1	stalkie_big_nohaplotig	exon	7566241	7566898	100	+	.	Parent=FBgn0031261.1.mrna1;Target=FBgn0031261.1 259 916 +
Chr1	stalkie_big_nohaplotig	exon	7566956	7567311	98	+	.	Parent=FBgn0031261.1.mrna1;Target=FBgn0031261.1 917 1272 +
Chr1	stalkie_big_nohaplotig	CDS	7565858	7565936	.	+	0	Parent=FBgn0031261.1.mrna1;Target=FBgn0031261.1 1 79 +
Chr1	stalkie_big_nohaplotig	CDS	7566007	7566185	.	+	2	Parent=FBgn0031261.1.mrna1;Target=FBgn0031261.1 80 258 +
Chr1	stalkie_big_nohaplotig	CDS	7566241	7566898	.	+	0	Parent=FBgn0031261.1.mrna1;Target=FBgn0031261.1 259 916 +
Chr1	stalkie_big_nohaplotig	CDS	7566956	7567311	.	+	2	Parent=FBgn0031261.1.mrna1;Target=FBgn0031261.1 917 1272 +
Chr1	gffcl	locus	7623890	7645619	.	+	.	ID=RLOC_00005473;geneIDs=comp155152_c0_seq1.path1;transcripts=comp155152_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7623890	7645619	.	+	.	ID=comp155152_c0_seq1.mrna1;geneID=comp155152_c0_seq1.path1;Name=comp155152_c0_seq1;Dir=indeterminatecoverage=60.7;identity=87.2;matches=306;mismatches=4;indels=41;unknowns=0;Target=comp155152_c0_seq1 462 409 .;locus=RLOC_00005473
Chr1	stalkie_big_nohaplotig	exon	7623890	7623895	100	+	.	Parent=comp155152_c0_seq1.mrna1;Target=comp155152_c0_seq1 214 209 .
Chr1	stalkie_big_nohaplotig	exon	7631517	7631525	100	+	.	Parent=comp155152_c0_seq1.mrna1;Target=comp155152_c0_seq1 223 215 .
Chr1	stalkie_big_nohaplotig	exon	7638357	7638360	100	+	.	Parent=comp155152_c0_seq1.mrna1;Target=comp155152_c0_seq1 234 231 .
Chr1	stalkie_big_nohaplotig	exon	7645292	7645619	86	+	.	Parent=comp155152_c0_seq1.mrna1;Target=comp155152_c0_seq1 529 235 .
Chr1	stalkie_big_nohaplotig	CDS	7645503	7645552	.	+	0	Parent=comp155152_c0_seq1.mrna1
Chr1	gffcl	locus	7633693	7642772	.	+	.	ID=RLOC_00005474;geneIDs=FBgn0035400.1.path1;transcripts=FBgn0035400.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7633693	7642772	.	+	.	ID=FBgn0035400.1.mrna1;geneID=FBgn0035400.1.path1;Name=FBgn0035400.1;Dir=sensecoverage=99.7;identity=99.9;matches=2355;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005474
Chr1	stalkie_big_nohaplotig	exon	7633693	7634640	99	+	.	Parent=FBgn0035400.1.mrna1;Target=FBgn0035400.1 7 954 +
Chr1	stalkie_big_nohaplotig	exon	7639714	7639809	100	+	.	Parent=FBgn0035400.1.mrna1;Target=FBgn0035400.1 955 1050 +
Chr1	stalkie_big_nohaplotig	exon	7639936	7640268	100	+	.	Parent=FBgn0035400.1.mrna1;Target=FBgn0035400.1 1051 1383 +
Chr1	stalkie_big_nohaplotig	exon	7640338	7640529	100	+	.	Parent=FBgn0035400.1.mrna1;Target=FBgn0035400.1 1384 1575 +
Chr1	stalkie_big_nohaplotig	exon	7640639	7640847	100	+	.	Parent=FBgn0035400.1.mrna1;Target=FBgn0035400.1 1576 1784 +
Chr1	stalkie_big_nohaplotig	exon	7640915	7641001	100	+	.	Parent=FBgn0035400.1.mrna1;Target=FBgn0035400.1 1785 1871 +
Chr1	stalkie_big_nohaplotig	exon	7641062	7641159	100	+	.	Parent=FBgn0035400.1.mrna1;Target=FBgn0035400.1 1872 1969 +
Chr1	stalkie_big_nohaplotig	exon	7642259	7642558	100	+	.	Parent=FBgn0035400.1.mrna1;Target=FBgn0035400.1 1970 2269 +
Chr1	stalkie_big_nohaplotig	exon	7642678	7642772	100	+	.	Parent=FBgn0035400.1.mrna1;Target=FBgn0035400.1 2270 2364 +
Chr1	stalkie_big_nohaplotig	CDS	7633693	7634640	.	+	0	Parent=FBgn0035400.1.mrna1;Target=FBgn0035400.1 7 954 +
Chr1	stalkie_big_nohaplotig	CDS	7639714	7639809	.	+	0	Parent=FBgn0035400.1.mrna1;Target=FBgn0035400.1 955 1050 +
Chr1	stalkie_big_nohaplotig	CDS	7639936	7640268	.	+	0	Parent=FBgn0035400.1.mrna1;Target=FBgn0035400.1 1051 1383 +
Chr1	stalkie_big_nohaplotig	CDS	7640338	7640529	.	+	0	Parent=FBgn0035400.1.mrna1;Target=FBgn0035400.1 1384 1575 +
Chr1	stalkie_big_nohaplotig	CDS	7640639	7640847	.	+	0	Parent=FBgn0035400.1.mrna1;Target=FBgn0035400.1 1576 1784 +
Chr1	stalkie_big_nohaplotig	CDS	7640915	7641001	.	+	1	Parent=FBgn0035400.1.mrna1;Target=FBgn0035400.1 1785 1871 +
Chr1	stalkie_big_nohaplotig	CDS	7641062	7641159	.	+	1	Parent=FBgn0035400.1.mrna1;Target=FBgn0035400.1 1872 1969 +
Chr1	stalkie_big_nohaplotig	CDS	7642259	7642558	.	+	2	Parent=FBgn0035400.1.mrna1;Target=FBgn0035400.1 1970 2269 +
Chr1	stalkie_big_nohaplotig	CDS	7642678	7642772	.	+	2	Parent=FBgn0035400.1.mrna1;Target=FBgn0035400.1 2270 2364 +
Chr1	gffcl	locus	7647914	7649206	.	+	.	ID=RLOC_00005475;geneIDs=comp161122_c0_seq1.path1;transcripts=comp161122_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7647914	7649206	.	+	.	ID=comp161122_c0_seq1.mrna1;geneID=comp161122_c0_seq1.path1;Name=comp161122_c0_seq1;Dir=sensecoverage=7.7;identity=96.1;matches=393;mismatches=6;indels=10;unknowns=0;locus=RLOC_00005475
Chr1	stalkie_big_nohaplotig	exon	7647914	7648043	97	+	.	Parent=comp161122_c0_seq1.mrna1;Target=comp161122_c0_seq1 1 129 +
Chr1	stalkie_big_nohaplotig	exon	7648931	7649206	95	+	.	Parent=comp161122_c0_seq1.mrna1;Target=comp161122_c0_seq1 130 402 +
Chr1	gffcl	locus	7669230	7669707	.	+	.	ID=RLOC_00005476;geneIDs=comp136068_c0_seq1.path1;transcripts=comp136068_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7669230	7669707	.	+	.	ID=comp136068_c0_seq1.mrna1;geneID=comp136068_c0_seq1.path1;Name=comp136068_c0_seq1;Dir=indeterminatecoverage=95.0;identity=100.0;matches=478;mismatches=0;indels=0;unknowns=0;Target=comp136068_c0_seq1 502 25 .;CDS_Target=comp136068_c0_seq1 145 26 .;locus=RLOC_00005476
Chr1	stalkie_big_nohaplotig	exon	7669230	7669707	100	+	.	Parent=comp136068_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	7669231	7669350	.	+	0	Parent=comp136068_c0_seq1.mrna1
Chr1	gffcl	locus	7695472	7695946	.	-	.	ID=RLOC_00005477;geneIDs=comp136068_c0_seq1.path2;transcripts=comp136068_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	7695472	7695946	.	-	.	ID=comp136068_c0_seq1.mrna2;geneID=comp136068_c0_seq1.path2;Name=comp136068_c0_seq1;Dir=indeterminatecoverage=95.8;identity=97.9;matches=472;mismatches=3;indels=7;unknowns=0;Target=comp136068_c0_seq1 502 21 .;CDS_Target=comp136068_c0_seq1 145 23 .;locus=RLOC_00005477
Chr1	stalkie_big_nohaplotig	exon	7695472	7695946	97	-	.	Parent=comp136068_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	7695822	7695944	.	-	0	Parent=comp136068_c0_seq1.mrna2
Chr1	gffcl	locus	7696632	7712011	.	+	.	ID=RLOC_00005478;geneIDs=comp163762_c3_seq1.path2;transcripts=comp163762_c3_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	7696632	7712011	.	+	.	ID=comp163762_c3_seq1.mrna2;geneID=comp163762_c3_seq1.path2;Name=comp163762_c3_seq1;Dir=indeterminatecoverage=97.1;identity=99.6;matches=2352;mismatches=10;indels=0;unknowns=0;Target=comp163762_c3_seq1 1857 352 .;locus=RLOC_00005478
Chr1	stalkie_big_nohaplotig	exon	7696632	7696635	100	+	.	Parent=comp163762_c3_seq1.mrna2;Target=comp163762_c3_seq1 74 71 .
Chr1	stalkie_big_nohaplotig	exon	7703343	7703350	100	+	.	Parent=comp163762_c3_seq1.mrna2;Target=comp163762_c3_seq1 82 75 .
Chr1	stalkie_big_nohaplotig	exon	7707938	7707942	100	+	.	Parent=comp163762_c3_seq1.mrna2;Target=comp163762_c3_seq1 93 89 .
Chr1	stalkie_big_nohaplotig	exon	7709667	7712011	99	+	.	Parent=comp163762_c3_seq1.mrna2;Target=comp163762_c3_seq1 2438 94 .
Chr1	stalkie_big_nohaplotig	CDS	7709925	7711430	.	+	0	Parent=comp163762_c3_seq1.mrna2
Chr1	gffcl	locus	7708266	7709188	.	-	.	ID=RLOC_00005479;geneIDs=FBgn0035181.1.path2;transcripts=FBgn0035181.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	7708266	7709188	.	-	.	ID=FBgn0035181.1.mrna2;geneID=FBgn0035181.1.path2;Name=FBgn0035181.1;Dir=sensecoverage=100.0;identity=99.6;matches=810;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005479
Chr1	stalkie_big_nohaplotig	exon	7708266	7708446	98	-	.	Parent=FBgn0035181.1.mrna2;Target=FBgn0035181.1 633 813 +
Chr1	stalkie_big_nohaplotig	exon	7708503	7708899	100	-	.	Parent=FBgn0035181.1.mrna2;Target=FBgn0035181.1 236 632 +
Chr1	stalkie_big_nohaplotig	exon	7708954	7709188	99	-	.	Parent=FBgn0035181.1.mrna2;Target=FBgn0035181.1 1 235 +
Chr1	stalkie_big_nohaplotig	CDS	7708266	7708446	.	-	1	Parent=FBgn0035181.1.mrna2;Target=FBgn0035181.1 633 813 +
Chr1	stalkie_big_nohaplotig	CDS	7708503	7708899	.	-	2	Parent=FBgn0035181.1.mrna2;Target=FBgn0035181.1 236 632 +
Chr1	stalkie_big_nohaplotig	CDS	7708954	7709188	.	-	0	Parent=FBgn0035181.1.mrna2;Target=FBgn0035181.1 1 235 +
Chr1	gffcl	locus	7818198	7819171	.	+	.	ID=RLOC_00005480;geneIDs=comp149461_c0_seq1.path1;transcripts=comp149461_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7818198	7819171	.	+	.	ID=comp149461_c0_seq1.mrna1;geneID=comp149461_c0_seq1.path1;Name=comp149461_c0_seq1;Dir=antisensecoverage=99.8;identity=98.8;matches=844;mismatches=10;indels=0;unknowns=0;Target=comp149461_c0_seq1 405 737 .;locus=RLOC_00005480
Chr1	stalkie_big_nohaplotig	exon	7818198	7818699	99	+	.	Parent=comp149461_c0_seq1.mrna1;Target=comp149461_c0_seq1 354 855 -
Chr1	stalkie_big_nohaplotig	exon	7818757	7818901	100	+	.	Parent=comp149461_c0_seq1.mrna1;Target=comp149461_c0_seq1 209 353 -
Chr1	stalkie_big_nohaplotig	exon	7818965	7819171	97	+	.	Parent=comp149461_c0_seq1.mrna1;Target=comp149461_c0_seq1 2 208 -
Chr1	stalkie_big_nohaplotig	CDS	7818316	7818648	.	+	0	Parent=comp149461_c0_seq1.mrna1
Chr1	gffcl	locus	7870582	7871185	.	+	.	ID=RLOC_00005481;geneIDs=comp136015_c0_seq1.path1;transcripts=comp136015_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7870582	7871185	.	+	.	ID=comp136015_c0_seq1.mrna1;geneID=comp136015_c0_seq1.path1;Name=comp136015_c0_seq1;Dir=sensecoverage=99.1;identity=98.3;matches=534;mismatches=9;indels=0;unknowns=0;Target=comp136015_c0_seq1 100 423 +;locus=RLOC_00005481
Chr1	stalkie_big_nohaplotig	exon	7870582	7870657	97	+	.	Parent=comp136015_c0_seq1.mrna1;Target=comp136015_c0_seq1 4 79 +
Chr1	stalkie_big_nohaplotig	exon	7870719	7871185	98	+	.	Parent=comp136015_c0_seq1.mrna1;Target=comp136015_c0_seq1 80 546 +
Chr1	stalkie_big_nohaplotig	CDS	7870739	7871062	.	+	0	Parent=comp136015_c0_seq1.mrna1
Chr1	gffcl	locus	7900055	7900660	.	-	.	ID=RLOC_00005482;geneIDs=comp142795_c0_seq1.path1;transcripts=comp142795_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	7900055	7900660	.	-	.	ID=comp142795_c0_seq1.mrna1;geneID=comp142795_c0_seq1.path1;Name=comp142795_c0_seq1;Dir=antisensecoverage=98.9;identity=98.7;matches=541;mismatches=7;indels=0;unknowns=0;Target=comp142795_c0_seq1 165 488 .;locus=RLOC_00005482
Chr1	stalkie_big_nohaplotig	exon	7900055	7900545	98	-	.	Parent=comp142795_c0_seq1.mrna1;Target=comp142795_c0_seq1 7 497 -
Chr1	stalkie_big_nohaplotig	exon	7900604	7900660	100	-	.	Parent=comp142795_c0_seq1.mrna1;Target=comp142795_c0_seq1 498 554 -
Chr1	stalkie_big_nohaplotig	CDS	7900213	7900536	.	-	0	Parent=comp142795_c0_seq1.mrna1
Chr1	gffcl	locus	8012461	8014324	.	-	.	ID=RLOC_00005483;geneIDs=FBgn0004870.1.path1;transcripts=FBgn0004870.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8012461	8014324	.	-	.	ID=FBgn0004870.1.mrna1;geneID=FBgn0004870.1.path1;Name=FBgn0004870.1;Dir=indeterminatecoverage=65.6;identity=99.5;matches=1855;mismatches=9;indels=0;unknowns=0;Target=FBgn0004870.1 1864 1 .;CDS_Target=FBgn0004870.1 1863 1 .;locus=RLOC_00005483
Chr1	stalkie_big_nohaplotig	exon	8012461	8014324	99	-	.	Parent=FBgn0004870.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8012462	8014324	.	-	0	Parent=FBgn0004870.1.mrna1
Chr1	gffcl	locus	8079836	8155061	.	+	.	ID=RLOC_00005484;geneIDs=FBgn0025525.1.path1;transcripts=FBgn0025525.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8079836	8155061	.	+	.	ID=FBgn0025525.1.mrna1;geneID=FBgn0025525.1.path1;Name=FBgn0025525.1;Dir=sensecoverage=100.0;identity=99.6;matches=2229;mismatches=9;indels=0;unknowns=0;locus=RLOC_00005484
Chr1	stalkie_big_nohaplotig	exon	8079836	8080681	99	+	.	Parent=FBgn0025525.1.mrna1;Target=FBgn0025525.1 1 846 +
Chr1	stalkie_big_nohaplotig	exon	8153277	8153340	100	+	.	Parent=FBgn0025525.1.mrna1;Target=FBgn0025525.1 847 910 +
Chr1	stalkie_big_nohaplotig	exon	8153476	8153900	99	+	.	Parent=FBgn0025525.1.mrna1;Target=FBgn0025525.1 911 1335 +
Chr1	stalkie_big_nohaplotig	exon	8154159	8155061	99	+	.	Parent=FBgn0025525.1.mrna1;Target=FBgn0025525.1 1336 2238 +
Chr1	stalkie_big_nohaplotig	CDS	8079836	8080681	.	+	0	Parent=FBgn0025525.1.mrna1;Target=FBgn0025525.1 1 846 +
Chr1	stalkie_big_nohaplotig	CDS	8153277	8153340	.	+	0	Parent=FBgn0025525.1.mrna1;Target=FBgn0025525.1 847 910 +
Chr1	stalkie_big_nohaplotig	CDS	8153476	8153900	.	+	2	Parent=FBgn0025525.1.mrna1;Target=FBgn0025525.1 911 1335 +
Chr1	stalkie_big_nohaplotig	CDS	8154159	8155061	.	+	0	Parent=FBgn0025525.1.mrna1;Target=FBgn0025525.1 1336 2238 +
Chr1	gffcl	locus	8158550	8159011	.	+	.	ID=RLOC_00005485;geneIDs=comp97278_c0_seq1.path1;transcripts=comp97278_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8158550	8159011	.	+	.	ID=comp97278_c0_seq1.mrna1;geneID=comp97278_c0_seq1.path1;Name=comp97278_c0_seq1;Dir=indeterminatecoverage=54.4;identity=92.8;matches=439;mismatches=21;indels=13;unknowns=0;Target=comp97278_c0_seq1 866 396 .;CDS_Target=comp97278_c0_seq1 582 397 .;locus=RLOC_00005485
Chr1	stalkie_big_nohaplotig	exon	8158550	8159011	92	+	.	Parent=comp97278_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8158551	8158732	.	+	0	Parent=comp97278_c0_seq1.mrna1
Chr1	gffcl	locus	8169487	8170951	.	+	.	ID=RLOC_00005487;geneIDs=FBgn0003742.3.path1;transcripts=FBgn0003742.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8169487	8170951	.	+	.	ID=FBgn0003742.3.mrna1;geneID=FBgn0003742.3.path1;Name=FBgn0003742.3;Dir=sensecoverage=100.0;identity=94.0;matches=1100;mismatches=22;indels=48;unknowns=0;locus=RLOC_00005487
Chr1	stalkie_big_nohaplotig	exon	8169487	8170227	91	+	.	Parent=FBgn0003742.3.mrna1;Target=FBgn0003742.3 1 789 +
Chr1	stalkie_big_nohaplotig	exon	8170452	8170580	99	+	.	Parent=FBgn0003742.3.mrna1;Target=FBgn0003742.3 790 918 +
Chr1	stalkie_big_nohaplotig	exon	8170643	8170818	99	+	.	Parent=FBgn0003742.3.mrna1;Target=FBgn0003742.3 919 1094 +
Chr1	stalkie_big_nohaplotig	exon	8170876	8170951	100	+	.	Parent=FBgn0003742.3.mrna1;Target=FBgn0003742.3 1095 1170 +
Chr1	stalkie_big_nohaplotig	CDS	8169487	8170227	.	+	0	Parent=FBgn0003742.3.mrna1;Target=FBgn0003742.3 1 789 +
Chr1	stalkie_big_nohaplotig	CDS	8170452	8170580	.	+	0	Parent=FBgn0003742.3.mrna1;Target=FBgn0003742.3 790 918 +
Chr1	stalkie_big_nohaplotig	CDS	8170643	8170818	.	+	0	Parent=FBgn0003742.3.mrna1;Target=FBgn0003742.3 919 1094 +
Chr1	stalkie_big_nohaplotig	CDS	8170876	8170951	.	+	1	Parent=FBgn0003742.3.mrna1;Target=FBgn0003742.3 1095 1170 +
Chr1	gffcl	locus	8174181	8176207	.	-	.	ID=RLOC_00005488;geneIDs=comp147782_c0_seq1.path1;transcripts=comp147782_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8174181	8176207	.	-	.	ID=comp147782_c0_seq1.mrna1;geneID=comp147782_c0_seq1.path1;Name=comp147782_c0_seq1;Dir=indeterminatecoverage=89.6;identity=91.0;matches=1218;mismatches=73;indels=48;unknowns=0;locus=RLOC_00005488
Chr1	stalkie_big_nohaplotig	exon	8174181	8174440	96	-	.	Parent=comp147782_c0_seq1.mrna1;Target=comp147782_c0_seq1 1465 1207 .
Chr1	stalkie_big_nohaplotig	exon	8175151	8176207	89	-	.	Parent=comp147782_c0_seq1.mrna1;Target=comp147782_c0_seq1 1206 153 .
Chr1	stalkie_big_nohaplotig	CDS	8174183	8174440	.	-	2	Parent=comp147782_c0_seq1.mrna1;Target=comp147782_c0_seq1 1463 1207 .
Chr1	stalkie_big_nohaplotig	CDS	8175151	8175175	.	-	0	Parent=comp147782_c0_seq1.mrna1;Target=comp147782_c0_seq1 1206 1182 .
Chr1	gffcl	locus	8238325	8242279	.	-	.	ID=RLOC_00005489;geneIDs=comp152385_c1_seq1.path1;transcripts=comp152385_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8238325	8242279	.	-	.	ID=comp152385_c1_seq1.mrna1;geneID=comp152385_c1_seq1.path1;Name=comp152385_c1_seq1;Dir=sensecoverage=99.8;identity=97.7;matches=1225;mismatches=13;indels=16;unknowns=0;Target=comp152385_c1_seq1 779 958 +;locus=RLOC_00005489
Chr1	stalkie_big_nohaplotig	exon	8238325	8238591	100	-	.	Parent=comp152385_c1_seq1.mrna1;Target=comp152385_c1_seq1 990 1256 +
Chr1	stalkie_big_nohaplotig	exon	8240673	8241403	99	-	.	Parent=comp152385_c1_seq1.mrna1;Target=comp152385_c1_seq1 259 989 +
Chr1	stalkie_big_nohaplotig	exon	8241478	8241650	89	-	.	Parent=comp152385_c1_seq1.mrna1;Target=comp152385_c1_seq1 71 258 +
Chr1	stalkie_big_nohaplotig	exon	8242213	8242279	92	-	.	Parent=comp152385_c1_seq1.mrna1;Target=comp152385_c1_seq1 3 70 +
Chr1	stalkie_big_nohaplotig	CDS	8240704	8240883	.	-	0	Parent=comp152385_c1_seq1.mrna1
Chr1	gffcl	locus	8263011	8263738	.	-	.	ID=RLOC_00005490;geneIDs=comp163806_c1_seq1.path1;transcripts=comp163806_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8263011	8263738	.	-	.	ID=comp163806_c1_seq1.mrna1;geneID=comp163806_c1_seq1.path1;Name=comp163806_c1_seq1;Dir=indeterminatecoverage=99.7;identity=98.5;matches=717;mismatches=11;indels=0;unknowns=0;Target=comp163806_c1_seq1 729 2 .;CDS_Target=comp163806_c1_seq1 229 110 .;locus=RLOC_00005490
Chr1	stalkie_big_nohaplotig	exon	8263011	8263738	98	-	.	Parent=comp163806_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8263511	8263630	.	-	0	Parent=comp163806_c1_seq1.mrna1
Chr1	gffcl	locus	8267607	8268599	.	-	.	ID=RLOC_00005491;geneIDs=comp160073_c0_seq1.path1;transcripts=comp160073_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8267607	8268599	.	-	.	ID=comp160073_c0_seq1.mrna1;geneID=comp160073_c0_seq1.path1;Name=comp160073_c0_seq1;Dir=sensecoverage=99.7;identity=88.0;matches=804;mismatches=70;indels=40;unknowns=0;locus=RLOC_00005491
Chr1	stalkie_big_nohaplotig	exon	8267607	8267776	70	-	.	Parent=comp160073_c0_seq1.mrna1;Target=comp160073_c0_seq1 713 903 +
Chr1	stalkie_big_nohaplotig	exon	8267832	8267883	96	-	.	Parent=comp160073_c0_seq1.mrna1;Target=comp160073_c0_seq1 661 712 +
Chr1	stalkie_big_nohaplotig	exon	8267937	8268599	92	-	.	Parent=comp160073_c0_seq1.mrna1;Target=comp160073_c0_seq1 1 660 +
Chr1	stalkie_big_nohaplotig	CDS	8267653	8267776	.	-	0	Parent=comp160073_c0_seq1.mrna1;Target=comp160073_c0_seq1 713 847 +
Chr1	stalkie_big_nohaplotig	CDS	8267832	8267883	.	-	1	Parent=comp160073_c0_seq1.mrna1;Target=comp160073_c0_seq1 661 712 +
Chr1	stalkie_big_nohaplotig	CDS	8267937	8268034	.	-	0	Parent=comp160073_c0_seq1.mrna1;Target=comp160073_c0_seq1 563 660 +
Chr1	gffcl	locus	8301377	8305945	.	-	.	ID=RLOC_00005492;geneIDs=comp156131_c1_seq1.path1;transcripts=comp156131_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8301377	8305945	.	-	.	ID=comp156131_c1_seq1.mrna1;geneID=comp156131_c1_seq1.path1;Name=comp156131_c1_seq1;Dir=sensecoverage=100.0;identity=96.9;matches=661;mismatches=16;indels=5;unknowns=0;Target=comp156131_c1_seq1 449 682 +;locus=RLOC_00005492
Chr1	stalkie_big_nohaplotig	exon	8301377	8301616	98	-	.	Parent=comp156131_c1_seq1.mrna1;Target=comp156131_c1_seq1 443 682 +
Chr1	stalkie_big_nohaplotig	exon	8301681	8301758	100	-	.	Parent=comp156131_c1_seq1.mrna1;Target=comp156131_c1_seq1 365 442 +
Chr1	stalkie_big_nohaplotig	exon	8305452	8305571	99	-	.	Parent=comp156131_c1_seq1.mrna1;Target=comp156131_c1_seq1 245 364 +
Chr1	stalkie_big_nohaplotig	exon	8305624	8305800	93	-	.	Parent=comp156131_c1_seq1.mrna1;Target=comp156131_c1_seq1 63 244 +
Chr1	stalkie_big_nohaplotig	exon	8305884	8305945	91	-	.	Parent=comp156131_c1_seq1.mrna1;Target=comp156131_c1_seq1 1 62 +
Chr1	stalkie_big_nohaplotig	CDS	8301377	8301610	.	-	0	Parent=comp156131_c1_seq1.mrna1
Chr1	gffcl	locus	8337759	8342202	.	+	.	ID=RLOC_00005493;geneIDs=ORF68.path1;transcripts=ORF68.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8337759	8342202	.	+	.	ID=ORF68.mrna1;geneID=ORF68.path1;Name=ORF68;Dir=sensecoverage=100.0;identity=98.8;matches=3244;mismatches=41;indels=0;unknowns=0;locus=RLOC_00005493
Chr1	stalkie_big_nohaplotig	exon	8337759	8337937	100	+	.	Parent=ORF68.mrna1;Target=ORF68 1 179 +
Chr1	stalkie_big_nohaplotig	exon	8337991	8339696	99	+	.	Parent=ORF68.mrna1;Target=ORF68 180 1885 +
Chr1	stalkie_big_nohaplotig	exon	8340057	8340080	91	+	.	Parent=ORF68.mrna1;Target=ORF68 1886 1909 +
Chr1	stalkie_big_nohaplotig	exon	8340345	8341198	96	+	.	Parent=ORF68.mrna1;Target=ORF68 1910 2763 +
Chr1	stalkie_big_nohaplotig	exon	8341563	8341741	100	+	.	Parent=ORF68.mrna1;Target=ORF68 2764 2942 +
Chr1	stalkie_big_nohaplotig	exon	8341798	8341988	99	+	.	Parent=ORF68.mrna1;Target=ORF68 2943 3133 +
Chr1	stalkie_big_nohaplotig	exon	8342051	8342202	100	+	.	Parent=ORF68.mrna1;Target=ORF68 3134 3285 +
Chr1	stalkie_big_nohaplotig	CDS	8337759	8337937	.	+	0	Parent=ORF68.mrna1;Target=ORF68 1 179 +
Chr1	stalkie_big_nohaplotig	CDS	8337991	8339696	.	+	1	Parent=ORF68.mrna1;Target=ORF68 180 1885 +
Chr1	stalkie_big_nohaplotig	CDS	8340057	8340080	.	+	2	Parent=ORF68.mrna1;Target=ORF68 1886 1909 +
Chr1	stalkie_big_nohaplotig	CDS	8340345	8341198	.	+	2	Parent=ORF68.mrna1;Target=ORF68 1910 2763 +
Chr1	stalkie_big_nohaplotig	CDS	8341563	8341741	.	+	0	Parent=ORF68.mrna1;Target=ORF68 2764 2942 +
Chr1	stalkie_big_nohaplotig	CDS	8341798	8341988	.	+	1	Parent=ORF68.mrna1;Target=ORF68 2943 3133 +
Chr1	stalkie_big_nohaplotig	CDS	8342051	8342202	.	+	2	Parent=ORF68.mrna1;Target=ORF68 3134 3285 +
Chr1	gffcl	locus	8349533	8353044	.	+	.	ID=RLOC_00005494;geneIDs=FBgn0003742.1.path1;transcripts=FBgn0003742.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8349533	8353044	.	+	.	ID=FBgn0003742.1.mrna1;geneID=FBgn0003742.1.path1;Name=FBgn0003742.1;Dir=sensecoverage=98.7;identity=98.8;matches=807;mismatches=10;indels=0;unknowns=0;locus=RLOC_00005494
Chr1	stalkie_big_nohaplotig	exon	8349533	8349581	97	+	.	Parent=FBgn0003742.1.mrna1;Target=FBgn0003742.1 1 49 +
Chr1	stalkie_big_nohaplotig	exon	8350408	8350501	100	+	.	Parent=FBgn0003742.1.mrna1;Target=FBgn0003742.1 50 143 +
Chr1	stalkie_big_nohaplotig	exon	8351669	8351761	97	+	.	Parent=FBgn0003742.1.mrna1;Target=FBgn0003742.1 144 236 +
Chr1	stalkie_big_nohaplotig	exon	8352253	8352293	100	+	.	Parent=FBgn0003742.1.mrna1;Target=FBgn0003742.1 237 277 +
Chr1	stalkie_big_nohaplotig	exon	8352370	8352515	98	+	.	Parent=FBgn0003742.1.mrna1;Target=FBgn0003742.1 278 423 +
Chr1	stalkie_big_nohaplotig	exon	8352583	8352890	99	+	.	Parent=FBgn0003742.1.mrna1;Target=FBgn0003742.1 424 731 +
Chr1	stalkie_big_nohaplotig	exon	8352959	8353044	96	+	.	Parent=FBgn0003742.1.mrna1;Target=FBgn0003742.1 732 817 +
Chr1	stalkie_big_nohaplotig	CDS	8349533	8349581	.	+	0	Parent=FBgn0003742.1.mrna1;Target=FBgn0003742.1 1 49 +
Chr1	stalkie_big_nohaplotig	CDS	8350408	8350501	.	+	2	Parent=FBgn0003742.1.mrna1;Target=FBgn0003742.1 50 143 +
Chr1	stalkie_big_nohaplotig	CDS	8351669	8351761	.	+	1	Parent=FBgn0003742.1.mrna1;Target=FBgn0003742.1 144 236 +
Chr1	stalkie_big_nohaplotig	CDS	8352253	8352293	.	+	1	Parent=FBgn0003742.1.mrna1;Target=FBgn0003742.1 237 277 +
Chr1	stalkie_big_nohaplotig	CDS	8352370	8352515	.	+	2	Parent=FBgn0003742.1.mrna1;Target=FBgn0003742.1 278 423 +
Chr1	stalkie_big_nohaplotig	CDS	8352583	8352890	.	+	0	Parent=FBgn0003742.1.mrna1;Target=FBgn0003742.1 424 731 +
Chr1	stalkie_big_nohaplotig	CDS	8352959	8353043	.	+	1	Parent=FBgn0003742.1.mrna1;Target=FBgn0003742.1 732 816 +
Chr1	gffcl	locus	8420770	8421801	.	-	.	ID=RLOC_00005495;geneIDs=FBgn0051200.1.path1;transcripts=FBgn0051200.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8420770	8421801	.	-	.	ID=FBgn0051200.1.mrna1;geneID=FBgn0051200.1.path1;Name=FBgn0051200.1;Dir=sensecoverage=100.0;identity=99.2;matches=920;mismatches=7;indels=0;unknowns=0;locus=RLOC_00005495
Chr1	stalkie_big_nohaplotig	exon	8420770	8421473	99	-	.	Parent=FBgn0051200.1.mrna1;Target=FBgn0051200.1 224 927 +
Chr1	stalkie_big_nohaplotig	exon	8421528	8421662	99	-	.	Parent=FBgn0051200.1.mrna1;Target=FBgn0051200.1 89 223 +
Chr1	stalkie_big_nohaplotig	exon	8421714	8421801	100	-	.	Parent=FBgn0051200.1.mrna1;Target=FBgn0051200.1 1 88 +
Chr1	stalkie_big_nohaplotig	CDS	8420770	8421473	.	-	2	Parent=FBgn0051200.1.mrna1;Target=FBgn0051200.1 224 927 +
Chr1	stalkie_big_nohaplotig	CDS	8421528	8421662	.	-	2	Parent=FBgn0051200.1.mrna1;Target=FBgn0051200.1 89 223 +
Chr1	stalkie_big_nohaplotig	CDS	8421714	8421801	.	-	0	Parent=FBgn0051200.1.mrna1;Target=FBgn0051200.1 1 88 +
Chr1	gffcl	locus	8426082	8429921	.	+	.	ID=RLOC_00005496;geneIDs=FBgn0035411.1.path1;transcripts=FBgn0035411.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8426082	8429921	.	+	.	ID=FBgn0035411.1.mrna1;geneID=FBgn0035411.1.path1;Name=FBgn0035411.1;Dir=sensecoverage=11.8;identity=100.0;matches=489;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005496
Chr1	stalkie_big_nohaplotig	exon	8426082	8426153	100	+	.	Parent=FBgn0035411.1.mrna1;Target=FBgn0035411.1 1 72 +
Chr1	stalkie_big_nohaplotig	exon	8429505	8429921	100	+	.	Parent=FBgn0035411.1.mrna1;Target=FBgn0035411.1 73 489 +
Chr1	stalkie_big_nohaplotig	CDS	8426082	8426153	.	+	0	Parent=FBgn0035411.1.mrna1;Target=FBgn0035411.1 1 72 +
Chr1	stalkie_big_nohaplotig	CDS	8429505	8429921	.	+	0	Parent=FBgn0035411.1.mrna1;Target=FBgn0035411.1 73 489 +
Chr1	gffcl	locus	8465581	8466699	.	-	.	ID=RLOC_00005497;geneIDs=FBgn0263993.2.path1;transcripts=FBgn0263993.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8465581	8466699	.	-	.	ID=FBgn0263993.2.mrna1;geneID=FBgn0263993.2.path1;Name=FBgn0263993.2;Dir=indeterminatecoverage=100.0;identity=96.1;matches=1116;mismatches=3;indels=42;unknowns=0;Target=FBgn0263993.2 1161 1 .;locus=RLOC_00005497
Chr1	stalkie_big_nohaplotig	exon	8465581	8466699	96	-	.	Parent=FBgn0263993.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8465581	8466699	.	-	0	Parent=FBgn0263993.2.mrna1
Chr1	gffcl	locus	8478189	8479049	.	+	.	ID=RLOC_00005498;geneIDs=comp158319_c0_seq1.path1;transcripts=comp158319_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8478189	8479049	.	+	.	ID=comp158319_c0_seq1.mrna1;geneID=comp158319_c0_seq1.path1;Name=comp158319_c0_seq1;Dir=indeterminatecoverage=99.8;identity=95.9;matches=848;mismatches=12;indels=24;unknowns=0;Target=comp158319_c0_seq1 883 1 .;CDS_Target=comp158319_c0_seq1 753 142 .;locus=RLOC_00005498
Chr1	stalkie_big_nohaplotig	exon	8478189	8479049	95	+	.	Parent=comp158319_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8478308	8478919	.	+	0	Parent=comp158319_c0_seq1.mrna1
Chr1	gffcl	locus	8493530	8493949	.	+	.	ID=RLOC_00005499;geneIDs=comp145546_c0_seq1.path1;transcripts=comp145546_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8493530	8493949	.	+	.	ID=comp145546_c0_seq1.mrna1;geneID=comp145546_c0_seq1.path1;Name=comp145546_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.3;matches=417;mismatches=3;indels=0;unknowns=0;Target=comp145546_c0_seq1 422 3 .;CDS_Target=comp145546_c0_seq1 383 156 .;locus=RLOC_00005499
Chr1	stalkie_big_nohaplotig	exon	8493530	8493949	99	+	.	Parent=comp145546_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8493683	8493910	.	+	0	Parent=comp145546_c0_seq1.mrna1
Chr1	gffcl	locus	8494185	8494459	.	-	.	ID=RLOC_00005500;geneIDs=comp837617_c0_seq1.path1;transcripts=comp837617_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8494185	8494459	.	-	.	ID=comp837617_c0_seq1.mrna1;geneID=comp837617_c0_seq1.path1;Name=comp837617_c0_seq1;Dir=indeterminatecoverage=94.9;identity=98.2;matches=273;mismatches=2;indels=3;unknowns=0;Target=comp837617_c0_seq1 290 13 .;CDS_Target=comp837617_c0_seq1 168 13 .;locus=RLOC_00005500
Chr1	stalkie_big_nohaplotig	exon	8494185	8494459	98	-	.	Parent=comp837617_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8494307	8494459	.	-	0	Parent=comp837617_c0_seq1.mrna1
Chr1	gffcl	locus	8507211	8559765	.	+	.	ID=RLOC_00005501;geneIDs=comp159311_c3_seq1.path1,comp159311_c3_seq1.path2;transcripts=comp159311_c3_seq1.mrna1,comp159311_c3_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	8507211	8559759	.	+	.	ID=comp159311_c3_seq1.mrna1;geneID=comp159311_c3_seq1.path1;Name=comp159311_c3_seq1;Dir=sensecoverage=50.0;identity=96.1;matches=3216;mismatches=109;indels=20;unknowns=0;locus=RLOC_00005501
Chr1	stalkie_big_nohaplotig	exon	8507211	8508140	98	+	.	Parent=comp159311_c3_seq1.mrna1;Target=comp159311_c3_seq1 1 933 +
Chr1	stalkie_big_nohaplotig	exon	8535547	8535800	100	+	.	Parent=comp159311_c3_seq1.mrna1;Target=comp159311_c3_seq1 934 1187 +
Chr1	stalkie_big_nohaplotig	exon	8536188	8536352	100	+	.	Parent=comp159311_c3_seq1.mrna1;Target=comp159311_c3_seq1 1188 1352 +
Chr1	stalkie_big_nohaplotig	exon	8539155	8539481	100	+	.	Parent=comp159311_c3_seq1.mrna1;Target=comp159311_c3_seq1 1353 1679 +
Chr1	stalkie_big_nohaplotig	exon	8542215	8542557	100	+	.	Parent=comp159311_c3_seq1.mrna1;Target=comp159311_c3_seq1 1680 2022 +
Chr1	stalkie_big_nohaplotig	exon	8542688	8542782	100	+	.	Parent=comp159311_c3_seq1.mrna1;Target=comp159311_c3_seq1 2023 2117 +
Chr1	stalkie_big_nohaplotig	exon	8542969	8543136	100	+	.	Parent=comp159311_c3_seq1.mrna1;Target=comp159311_c3_seq1 2118 2285 +
Chr1	stalkie_big_nohaplotig	exon	8550747	8550843	98	+	.	Parent=comp159311_c3_seq1.mrna1;Target=comp159311_c3_seq1 2286 2382 +
Chr1	stalkie_big_nohaplotig	exon	8551972	8552387	100	+	.	Parent=comp159311_c3_seq1.mrna1;Target=comp159311_c3_seq1 2383 2798 +
Chr1	stalkie_big_nohaplotig	exon	8559131	8559139	100	+	.	Parent=comp159311_c3_seq1.mrna1;Target=comp159311_c3_seq1 3169 3177 +
Chr1	stalkie_big_nohaplotig	exon	8559228	8559759	78	+	.	Parent=comp159311_c3_seq1.mrna1;Target=comp159311_c3_seq1 3212 3736 +
Chr1	stalkie_big_nohaplotig	CDS	8508053	8508140	.	+	0	Parent=comp159311_c3_seq1.mrna1;Target=comp159311_c3_seq1 846 933 +
Chr1	stalkie_big_nohaplotig	CDS	8535547	8535800	.	+	2	Parent=comp159311_c3_seq1.mrna1;Target=comp159311_c3_seq1 934 1187 +
Chr1	stalkie_big_nohaplotig	CDS	8536188	8536352	.	+	0	Parent=comp159311_c3_seq1.mrna1;Target=comp159311_c3_seq1 1188 1352 +
Chr1	stalkie_big_nohaplotig	CDS	8539155	8539481	.	+	0	Parent=comp159311_c3_seq1.mrna1;Target=comp159311_c3_seq1 1353 1679 +
Chr1	stalkie_big_nohaplotig	CDS	8542215	8542557	.	+	0	Parent=comp159311_c3_seq1.mrna1;Target=comp159311_c3_seq1 1680 2022 +
Chr1	stalkie_big_nohaplotig	CDS	8542688	8542782	.	+	2	Parent=comp159311_c3_seq1.mrna1;Target=comp159311_c3_seq1 2023 2117 +
Chr1	stalkie_big_nohaplotig	CDS	8542969	8543136	.	+	0	Parent=comp159311_c3_seq1.mrna1;Target=comp159311_c3_seq1 2118 2285 +
Chr1	stalkie_big_nohaplotig	CDS	8550747	8550843	.	+	0	Parent=comp159311_c3_seq1.mrna1;Target=comp159311_c3_seq1 2286 2382 +
Chr1	stalkie_big_nohaplotig	CDS	8551972	8552387	.	+	2	Parent=comp159311_c3_seq1.mrna1;Target=comp159311_c3_seq1 2383 2798 +
Chr1	stalkie_big_nohaplotig	CDS	8559131	8559139	.	+	0	Parent=comp159311_c3_seq1.mrna1;Target=comp159311_c3_seq1 3169 3177 +
Chr1	stalkie_big_nohaplotig	CDS	8559228	8559535	.	+	0	Parent=comp159311_c3_seq1.mrna1;Target=comp159311_c3_seq1 3212 3512 +
Chr1	stalkie_big_nohaplotig	mRNA	8507211	8559765	.	+	.	ID=comp159311_c3_seq1.mrna2;geneID=comp159311_c3_seq1.path2;Name=comp159311_c3_seq1;Dir=antisensecoverage=50.0;identity=99.6;matches=3128;mismatches=8;indels=3;unknowns=0;locus=RLOC_00005501
Chr1	stalkie_big_nohaplotig	exon	8507211	8508140	98	+	.	Parent=comp159311_c3_seq1.mrna2;Target=comp159311_c3_seq1 6546 7478 -
Chr1	stalkie_big_nohaplotig	exon	8535547	8535800	100	+	.	Parent=comp159311_c3_seq1.mrna2;Target=comp159311_c3_seq1 6292 6545 -
Chr1	stalkie_big_nohaplotig	exon	8536188	8536352	100	+	.	Parent=comp159311_c3_seq1.mrna2;Target=comp159311_c3_seq1 6127 6291 -
Chr1	stalkie_big_nohaplotig	exon	8539155	8539481	100	+	.	Parent=comp159311_c3_seq1.mrna2;Target=comp159311_c3_seq1 5800 6126 -
Chr1	stalkie_big_nohaplotig	exon	8542215	8542557	100	+	.	Parent=comp159311_c3_seq1.mrna2;Target=comp159311_c3_seq1 5457 5799 -
Chr1	stalkie_big_nohaplotig	exon	8542688	8542782	100	+	.	Parent=comp159311_c3_seq1.mrna2;Target=comp159311_c3_seq1 5362 5456 -
Chr1	stalkie_big_nohaplotig	exon	8542969	8543136	100	+	.	Parent=comp159311_c3_seq1.mrna2;Target=comp159311_c3_seq1 5194 5361 -
Chr1	stalkie_big_nohaplotig	exon	8550747	8550843	98	+	.	Parent=comp159311_c3_seq1.mrna2;Target=comp159311_c3_seq1 5097 5193 -
Chr1	stalkie_big_nohaplotig	exon	8551972	8552387	100	+	.	Parent=comp159311_c3_seq1.mrna2;Target=comp159311_c3_seq1 4681 5096 -
Chr1	stalkie_big_nohaplotig	exon	8559215	8559224	100	+	.	Parent=comp159311_c3_seq1.mrna2;Target=comp159311_c3_seq1 4271 4280 -
Chr1	stalkie_big_nohaplotig	exon	8559436	8559765	100	+	.	Parent=comp159311_c3_seq1.mrna2;Target=comp159311_c3_seq1 3737 4066 -
Chr1	gffcl	locus	8560508	8561068	.	-	.	ID=RLOC_00005502;geneIDs=comp150409_c0_seq1.path1;transcripts=comp150409_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8560508	8561068	.	-	.	ID=comp150409_c0_seq1.mrna1;geneID=comp150409_c0_seq1.path1;Name=comp150409_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=557;mismatches=4;indels=0;unknowns=0;Target=comp150409_c0_seq1 561 1 .;CDS_Target=comp150409_c0_seq1 150 1 .;locus=RLOC_00005502
Chr1	stalkie_big_nohaplotig	exon	8560508	8561068	99	-	.	Parent=comp150409_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8560919	8561068	.	-	0	Parent=comp150409_c0_seq1.mrna1
Chr1	gffcl	locus	8561811	8562078	.	-	.	ID=RLOC_00005503;geneIDs=comp158051_c0_seq1.path1;transcripts=comp158051_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8561811	8562078	.	-	.	ID=comp158051_c0_seq1.mrna1;geneID=comp158051_c0_seq1.path1;Name=comp158051_c0_seq1;Dir=indeterminatecoverage=73.0;identity=92.5;matches=248;mismatches=20;indels=0;unknowns=0;Target=comp158051_c0_seq1 269 2 .;CDS_Target=comp158051_c0_seq1 98 3 .;locus=RLOC_00005503
Chr1	stalkie_big_nohaplotig	exon	8561811	8562078	92	-	.	Parent=comp158051_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8561982	8562077	.	-	0	Parent=comp158051_c0_seq1.mrna1
Chr1	gffcl	locus	8565387	8566016	.	+	.	ID=RLOC_00005504;geneIDs=comp67110_c0_seq1.path1;transcripts=comp67110_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8565387	8566016	.	+	.	ID=comp67110_c0_seq1.mrna1;geneID=comp67110_c0_seq1.path1;Name=comp67110_c0_seq1;Dir=indeterminatecoverage=98.6;identity=99.2;matches=627;mismatches=3;indels=2;unknowns=0;Target=comp67110_c0_seq1 641 10 .;CDS_Target=comp67110_c0_seq1 83 18 .;locus=RLOC_00005504
Chr1	stalkie_big_nohaplotig	exon	8565387	8566016	99	+	.	Parent=comp67110_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8565395	8565460	.	+	0	Parent=comp67110_c0_seq1.mrna1
Chr1	gffcl	locus	8575881	8605964	.	.	.	ID=RLOC_00005505;geneIDs=comp100086_c0_seq1.path1,comp150216_c0_seq1.path1;transcripts=comp100086_c0_seq1.mrna1,comp150216_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8575881	8605964	.	+	.	ID=comp100086_c0_seq1.mrna1;geneID=comp100086_c0_seq1.path1;Name=comp100086_c0_seq1;Dir=indeterminatecoverage=94.6;identity=99.8;matches=489;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005505
Chr1	stalkie_big_nohaplotig	exon	8575881	8575888	100	+	.	Parent=comp100086_c0_seq1.mrna1;Target=comp100086_c0_seq1 36 29 .
Chr1	stalkie_big_nohaplotig	exon	8599931	8599936	100	+	.	Parent=comp100086_c0_seq1.mrna1;Target=comp100086_c0_seq1 42 37 .
Chr1	stalkie_big_nohaplotig	exon	8603050	8603056	100	+	.	Parent=comp100086_c0_seq1.mrna1;Target=comp100086_c0_seq1 49 43 .
Chr1	stalkie_big_nohaplotig	exon	8605241	8605245	100	+	.	Parent=comp100086_c0_seq1.mrna1;Target=comp100086_c0_seq1 54 50 .
Chr1	stalkie_big_nohaplotig	exon	8605501	8605964	99	+	.	Parent=comp100086_c0_seq1.mrna1;Target=comp100086_c0_seq1 518 55 .
Chr1	stalkie_big_nohaplotig	CDS	8575881	8575888	.	+	0	Parent=comp100086_c0_seq1.mrna1;Target=comp100086_c0_seq1 36 29 .
Chr1	stalkie_big_nohaplotig	CDS	8599931	8599936	.	+	1	Parent=comp100086_c0_seq1.mrna1;Target=comp100086_c0_seq1 42 37 .
Chr1	stalkie_big_nohaplotig	CDS	8603050	8603056	.	+	1	Parent=comp100086_c0_seq1.mrna1;Target=comp100086_c0_seq1 49 43 .
Chr1	stalkie_big_nohaplotig	CDS	8605241	8605245	.	+	0	Parent=comp100086_c0_seq1.mrna1;Target=comp100086_c0_seq1 54 50 .
Chr1	stalkie_big_nohaplotig	CDS	8605501	8605567	.	+	1	Parent=comp100086_c0_seq1.mrna1;Target=comp100086_c0_seq1 121 55 .
Chr1	stalkie_big_nohaplotig	mRNA	8604538	8605262	.	-	.	ID=comp150216_c0_seq1.mrna1;geneID=comp150216_c0_seq1.path1;Name=comp150216_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=720;mismatches=2;indels=6;unknowns=0;Target=comp150216_c0_seq1 725 1 .;CDS_Target=comp150216_c0_seq1 365 219 .;locus=RLOC_00005505
Chr1	stalkie_big_nohaplotig	exon	8604538	8605262	98	-	.	Parent=comp150216_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8604898	8605044	.	-	0	Parent=comp150216_c0_seq1.mrna1
Chr1	gffcl	locus	8599846	8600751	.	-	.	ID=RLOC_00005506;geneIDs=comp151874_c0_seq1.path1;transcripts=comp151874_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8599846	8600751	.	-	.	ID=comp151874_c0_seq1.mrna1;geneID=comp151874_c0_seq1.path1;Name=comp151874_c0_seq1;Dir=sensecoverage=98.4;identity=99.2;matches=845;mismatches=7;indels=0;unknowns=0;Target=comp151874_c0_seq1 519 602 +;locus=RLOC_00005506
Chr1	stalkie_big_nohaplotig	exon	8599846	8600302	99	-	.	Parent=comp151874_c0_seq1.mrna1;Target=comp151874_c0_seq1 410 866 +
Chr1	stalkie_big_nohaplotig	exon	8600357	8600751	99	-	.	Parent=comp151874_c0_seq1.mrna1;Target=comp151874_c0_seq1 15 409 +
Chr1	stalkie_big_nohaplotig	CDS	8600110	8600193	.	-	0	Parent=comp151874_c0_seq1.mrna1
Chr1	gffcl	locus	8662767	8663547	.	-	.	ID=RLOC_00005507;geneIDs=comp150717_c1_seq1.path1;transcripts=comp150717_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8662767	8663547	.	-	.	ID=comp150717_c1_seq1.mrna1;geneID=comp150717_c1_seq1.path1;Name=comp150717_c1_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=573;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005507
Chr1	stalkie_big_nohaplotig	exon	8662767	8663006	100	-	.	Parent=comp150717_c1_seq1.mrna1;Target=comp150717_c1_seq1 334 573 +
Chr1	stalkie_big_nohaplotig	exon	8663109	8663254	100	-	.	Parent=comp150717_c1_seq1.mrna1;Target=comp150717_c1_seq1 188 333 +
Chr1	stalkie_big_nohaplotig	exon	8663361	8663547	100	-	.	Parent=comp150717_c1_seq1.mrna1;Target=comp150717_c1_seq1 1 187 +
Chr1	stalkie_big_nohaplotig	CDS	8662832	8663006	.	-	1	Parent=comp150717_c1_seq1.mrna1;Target=comp150717_c1_seq1 334 508 +
Chr1	stalkie_big_nohaplotig	CDS	8663109	8663254	.	-	0	Parent=comp150717_c1_seq1.mrna1;Target=comp150717_c1_seq1 188 333 +
Chr1	stalkie_big_nohaplotig	CDS	8663361	8663378	.	-	0	Parent=comp150717_c1_seq1.mrna1;Target=comp150717_c1_seq1 170 187 +
Chr1	gffcl	locus	8668290	8671345	.	-	.	ID=RLOC_00005508;geneIDs=FBgn0085300.1.path1;transcripts=FBgn0085300.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8668290	8671345	.	-	.	ID=FBgn0085300.1.mrna1;geneID=FBgn0085300.1.path1;Name=FBgn0085300.1;Dir=sensecoverage=100.0;identity=99.1;matches=324;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005508
Chr1	stalkie_big_nohaplotig	exon	8668290	8668500	98	-	.	Parent=FBgn0085300.1.mrna1;Target=FBgn0085300.1 117 327 +
Chr1	stalkie_big_nohaplotig	exon	8671149	8671237	100	-	.	Parent=FBgn0085300.1.mrna1;Target=FBgn0085300.1 28 116 +
Chr1	stalkie_big_nohaplotig	exon	8671319	8671345	100	-	.	Parent=FBgn0085300.1.mrna1;Target=FBgn0085300.1 1 27 +
Chr1	stalkie_big_nohaplotig	CDS	8668290	8668500	.	-	1	Parent=FBgn0085300.1.mrna1;Target=FBgn0085300.1 117 327 +
Chr1	stalkie_big_nohaplotig	CDS	8671149	8671237	.	-	0	Parent=FBgn0085300.1.mrna1;Target=FBgn0085300.1 28 116 +
Chr1	stalkie_big_nohaplotig	CDS	8671319	8671345	.	-	0	Parent=FBgn0085300.1.mrna1;Target=FBgn0085300.1 1 27 +
Chr1	gffcl	locus	8682898	8683452	.	+	.	ID=RLOC_00005509;geneIDs=FBgn0004106.1.path1;transcripts=FBgn0004106.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8682898	8683452	.	+	.	ID=FBgn0004106.1.mrna1;geneID=FBgn0004106.1.path1;Name=FBgn0004106.1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=548;mismatches=7;indels=0;unknowns=0;Target=FBgn0004106.1 555 1 .;locus=RLOC_00005509
Chr1	stalkie_big_nohaplotig	exon	8682898	8683452	98	+	.	Parent=FBgn0004106.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8682898	8683452	.	+	0	Parent=FBgn0004106.1.mrna1
Chr1	gffcl	locus	8689631	8690067	.	-	.	ID=RLOC_00005510;geneIDs=comp151343_c0_seq1.path1;transcripts=comp151343_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8689631	8690067	.	-	.	ID=comp151343_c0_seq1.mrna1;geneID=comp151343_c0_seq1.path1;Name=comp151343_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.3;matches=435;mismatches=2;indels=1;unknowns=0;Target=comp151343_c0_seq1 440 3 .;CDS_Target=comp151343_c0_seq1 148 23 .;locus=RLOC_00005510
Chr1	stalkie_big_nohaplotig	exon	8689631	8690067	99	-	.	Parent=comp151343_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8689922	8690047	.	-	0	Parent=comp151343_c0_seq1.mrna1
Chr1	gffcl	locus	8692067	8693081	.	-	.	ID=RLOC_00005511;geneIDs=comp159871_c0_seq1.path1;transcripts=comp159871_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8692067	8693081	.	-	.	ID=comp159871_c0_seq1.mrna1;geneID=comp159871_c0_seq1.path1;Name=comp159871_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1004;mismatches=10;indels=1;unknowns=0;Target=comp159871_c0_seq1 1014 1 .;CDS_Target=comp159871_c0_seq1 513 418 .;locus=RLOC_00005511
Chr1	stalkie_big_nohaplotig	exon	8692067	8693081	98	-	.	Parent=comp159871_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8692569	8692664	.	-	0	Parent=comp159871_c0_seq1.mrna1
Chr1	gffcl	locus	8698496	8698952	.	+	.	ID=RLOC_00005512;geneIDs=comp148244_c0_seq1.path1;transcripts=comp148244_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8698496	8698952	.	+	.	ID=comp148244_c0_seq1.mrna1;geneID=comp148244_c0_seq1.path1;Name=comp148244_c0_seq1;Dir=indeterminatecoverage=99.8;identity=94.3;matches=431;mismatches=26;indels=0;unknowns=0;Target=comp148244_c0_seq1 457 1 .;CDS_Target=comp148244_c0_seq1 70 2 .;locus=RLOC_00005512
Chr1	stalkie_big_nohaplotig	exon	8698496	8698952	94	+	.	Parent=comp148244_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8698497	8698565	.	+	0	Parent=comp148244_c0_seq1.mrna1
Chr1	gffcl	locus	8701615	8701842	.	+	.	ID=RLOC_00005513;geneIDs=comp137288_c0_seq1.path1;transcripts=comp137288_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8701615	8701842	.	+	.	ID=comp137288_c0_seq1.mrna1;geneID=comp137288_c0_seq1.path1;Name=comp137288_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.6;matches=227;mismatches=1;indels=0;unknowns=0;Target=comp137288_c0_seq1 229 2 .;CDS_Target=comp137288_c0_seq1 75 4 .;locus=RLOC_00005513
Chr1	stalkie_big_nohaplotig	exon	8701615	8701842	99	+	.	Parent=comp137288_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8701617	8701688	.	+	0	Parent=comp137288_c0_seq1.mrna1
Chr1	gffcl	locus	8702390	8702828	.	+	.	ID=RLOC_00005514;geneIDs=comp55596_c0_seq1.path1,comp378221_c0_seq1.path1;transcripts=comp378221_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8702584	8702828	.	+	.	ID=comp378221_c0_seq1.mrna1;geneID=comp378221_c0_seq1.path1;Name=comp378221_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=245;mismatches=0;indels=0;unknowns=0;Target=comp378221_c0_seq1 245 1 .;CDS_Target=comp378221_c0_seq1 244 170 .;locus=RLOC_00005514
Chr1	stalkie_big_nohaplotig	exon	8702584	8702828	100	+	.	Parent=comp378221_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8702753	8702827	.	+	0	Parent=comp378221_c0_seq1.mrna1
Chr1	gffcl	locus	8703358	8713778	.	-	.	ID=RLOC_00005515;geneIDs=FBgn0035688.1.path1;transcripts=FBgn0035688.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8703358	8713778	.	-	.	ID=FBgn0035688.1.mrna1;geneID=FBgn0035688.1.path1;Name=FBgn0035688.1;Dir=sensecoverage=100.0;identity=99.7;matches=3006;mismatches=9;indels=0;unknowns=0;locus=RLOC_00005515
Chr1	stalkie_big_nohaplotig	exon	8703358	8703595	99	-	.	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 2778 3015 +
Chr1	stalkie_big_nohaplotig	exon	8706669	8707339	100	-	.	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 2107 2777 +
Chr1	stalkie_big_nohaplotig	exon	8707767	8707803	100	-	.	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 2070 2106 +
Chr1	stalkie_big_nohaplotig	exon	8707866	8708177	99	-	.	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 1758 2069 +
Chr1	stalkie_big_nohaplotig	exon	8708243	8708307	100	-	.	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 1693 1757 +
Chr1	stalkie_big_nohaplotig	exon	8709141	8709657	99	-	.	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 1176 1692 +
Chr1	stalkie_big_nohaplotig	exon	8709722	8709840	100	-	.	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 1057 1175 +
Chr1	stalkie_big_nohaplotig	exon	8709908	8710046	100	-	.	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 918 1056 +
Chr1	stalkie_big_nohaplotig	exon	8710113	8710426	99	-	.	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 604 917 +
Chr1	stalkie_big_nohaplotig	exon	8710489	8710813	99	-	.	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 279 603 +
Chr1	stalkie_big_nohaplotig	exon	8710884	8711003	100	-	.	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 159 278 +
Chr1	stalkie_big_nohaplotig	exon	8713556	8713635	100	-	.	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 79 158 +
Chr1	stalkie_big_nohaplotig	exon	8713701	8713778	100	-	.	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 1 78 +
Chr1	stalkie_big_nohaplotig	CDS	8703358	8703595	.	-	1	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 2778 3015 +
Chr1	stalkie_big_nohaplotig	CDS	8706669	8707339	.	-	0	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 2107 2777 +
Chr1	stalkie_big_nohaplotig	CDS	8707767	8707803	.	-	1	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 2070 2106 +
Chr1	stalkie_big_nohaplotig	CDS	8707866	8708177	.	-	1	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 1758 2069 +
Chr1	stalkie_big_nohaplotig	CDS	8708243	8708307	.	-	0	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 1693 1757 +
Chr1	stalkie_big_nohaplotig	CDS	8709141	8709657	.	-	1	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 1176 1692 +
Chr1	stalkie_big_nohaplotig	CDS	8709722	8709840	.	-	0	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 1057 1175 +
Chr1	stalkie_big_nohaplotig	CDS	8709908	8710046	.	-	1	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 918 1056 +
Chr1	stalkie_big_nohaplotig	CDS	8710113	8710426	.	-	0	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 604 917 +
Chr1	stalkie_big_nohaplotig	CDS	8710489	8710813	.	-	1	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 279 603 +
Chr1	stalkie_big_nohaplotig	CDS	8710884	8711003	.	-	1	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 159 278 +
Chr1	stalkie_big_nohaplotig	CDS	8713556	8713635	.	-	0	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 79 158 +
Chr1	stalkie_big_nohaplotig	CDS	8713701	8713778	.	-	0	Parent=FBgn0035688.1.mrna1;Target=FBgn0035688.1 1 78 +
Chr1	gffcl	locus	8716742	8717626	.	+	.	ID=RLOC_00005516;geneIDs=FBgn0037045.1.path1;transcripts=FBgn0037045.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8716742	8717626	.	+	.	ID=FBgn0037045.1.mrna1;geneID=FBgn0037045.1.path1;Name=FBgn0037045.1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=868;mismatches=17;indels=0;unknowns=0;Target=FBgn0037045.1 885 1 .;locus=RLOC_00005516
Chr1	stalkie_big_nohaplotig	exon	8716742	8717626	98	+	.	Parent=FBgn0037045.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8716742	8717626	.	+	0	Parent=FBgn0037045.1.mrna1
Chr1	gffcl	locus	8717801	8719399	.	-	.	ID=RLOC_00005517;geneIDs=FBgn0037044.1.path1;transcripts=FBgn0037044.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8717801	8719399	.	-	.	ID=FBgn0037044.1.mrna1;geneID=FBgn0037044.1.path1;Name=FBgn0037044.1;Dir=sensecoverage=100.0;identity=99.1;matches=1374;mismatches=12;indels=0;unknowns=0;locus=RLOC_00005517
Chr1	stalkie_big_nohaplotig	exon	8717801	8718069	99	-	.	Parent=FBgn0037044.1.mrna1;Target=FBgn0037044.1 1118 1386 +
Chr1	stalkie_big_nohaplotig	exon	8718138	8718669	98	-	.	Parent=FBgn0037044.1.mrna1;Target=FBgn0037044.1 586 1117 +
Chr1	stalkie_big_nohaplotig	exon	8718755	8718944	100	-	.	Parent=FBgn0037044.1.mrna1;Target=FBgn0037044.1 396 585 +
Chr1	stalkie_big_nohaplotig	exon	8719005	8719399	99	-	.	Parent=FBgn0037044.1.mrna1;Target=FBgn0037044.1 1 395 +
Chr1	stalkie_big_nohaplotig	CDS	8717801	8718069	.	-	2	Parent=FBgn0037044.1.mrna1;Target=FBgn0037044.1 1118 1386 +
Chr1	stalkie_big_nohaplotig	CDS	8718138	8718669	.	-	0	Parent=FBgn0037044.1.mrna1;Target=FBgn0037044.1 586 1117 +
Chr1	stalkie_big_nohaplotig	CDS	8718755	8718944	.	-	1	Parent=FBgn0037044.1.mrna1;Target=FBgn0037044.1 396 585 +
Chr1	stalkie_big_nohaplotig	CDS	8719005	8719399	.	-	0	Parent=FBgn0037044.1.mrna1;Target=FBgn0037044.1 1 395 +
Chr1	gffcl	locus	8721307	8722253	.	+	.	ID=RLOC_00005518;geneIDs=ORF1972.path1;transcripts=ORF1972.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8721307	8722253	.	+	.	ID=ORF1972.mrna1;geneID=ORF1972.path1;Name=ORF1972;Dir=indeterminatecoverage=100.0;identity=98.7;matches=936;mismatches=11;indels=1;unknowns=0;Target=ORF1972 948 1 .;locus=RLOC_00005518
Chr1	stalkie_big_nohaplotig	exon	8721307	8722253	98	+	.	Parent=ORF1972.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8721307	8722253	.	+	0	Parent=ORF1972.mrna1
Chr1	gffcl	locus	8736786	8737165	.	-	.	ID=RLOC_00005520;geneIDs=comp575205_c0_seq1.path1;transcripts=comp575205_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8736786	8737165	.	-	.	ID=comp575205_c0_seq1.mrna1;geneID=comp575205_c0_seq1.path1;Name=comp575205_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=379;mismatches=1;indels=0;unknowns=0;Target=comp575205_c0_seq1 380 1 .;CDS_Target=comp575205_c0_seq1 334 260 .;locus=RLOC_00005520
Chr1	stalkie_big_nohaplotig	exon	8736786	8737165	99	-	.	Parent=comp575205_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8736832	8736906	.	-	0	Parent=comp575205_c0_seq1.mrna1
Chr1	gffcl	locus	8739095	8740839	.	.	.	ID=RLOC_00005521;geneIDs=comp146175_c0_seq1.path1,comp152401_c0_seq1.path1,comp153609_c0_seq1.path1;transcripts=comp146175_c0_seq1.mrna1,comp153609_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8739095	8740096	.	-	.	ID=comp146175_c0_seq1.mrna1;geneID=comp146175_c0_seq1.path1;Name=comp146175_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=999;mismatches=3;indels=1;unknowns=0;Target=comp146175_c0_seq1 1003 1 .;CDS_Target=comp146175_c0_seq1 903 688 .;locus=RLOC_00005521
Chr1	stalkie_big_nohaplotig	exon	8739095	8740096	99	-	.	Parent=comp146175_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8739195	8739410	.	-	0	Parent=comp146175_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8740454	8740839	.	-	.	ID=comp153609_c0_seq1.mrna1;geneID=comp153609_c0_seq1.path1;Name=comp153609_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.7;matches=381;mismatches=5;indels=0;unknowns=0;Target=comp153609_c0_seq1 386 1 .;CDS_Target=comp153609_c0_seq1 59 3 .;locus=RLOC_00005521
Chr1	stalkie_big_nohaplotig	exon	8740454	8740839	98	-	.	Parent=comp153609_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8740781	8740837	.	-	0	Parent=comp153609_c0_seq1.mrna1
Chr1	gffcl	locus	8746963	8748566	.	-	.	ID=RLOC_00005522;geneIDs=comp158886_c0_seq1.path1;transcripts=comp158886_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8746963	8748566	.	-	.	ID=comp158886_c0_seq1.mrna1;geneID=comp158886_c0_seq1.path1;Name=comp158886_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=1571;mismatches=25;indels=21;unknowns=0;Target=comp158886_c0_seq1 1609 1 .;CDS_Target=comp158886_c0_seq1 400 272 .;locus=RLOC_00005522
Chr1	stalkie_big_nohaplotig	exon	8746963	8748566	97	-	.	Parent=comp158886_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8748165	8748295	.	-	0	Parent=comp158886_c0_seq1.mrna1
Chr1	gffcl	locus	8750877	8751860	.	-	.	ID=RLOC_00005523;geneIDs=comp158659_c0_seq1.path1;transcripts=comp158659_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8750877	8751860	.	-	.	ID=comp158659_c0_seq1.mrna1;geneID=comp158659_c0_seq1.path1;Name=comp158659_c0_seq1;Dir=indeterminatecoverage=91.7;identity=99.0;matches=974;mismatches=10;indels=0;unknowns=0;Target=comp158659_c0_seq1 989 6 .;CDS_Target=comp158659_c0_seq1 63 7 .;locus=RLOC_00005523
Chr1	stalkie_big_nohaplotig	exon	8750877	8751860	98	-	.	Parent=comp158659_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8751803	8751859	.	-	0	Parent=comp158659_c0_seq1.mrna1
Chr1	gffcl	locus	8751907	8752836	.	+	.	ID=RLOC_00005524;geneIDs=comp153247_c0_seq1.path1;transcripts=comp153247_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8751907	8752836	.	+	.	ID=comp153247_c0_seq1.mrna1;geneID=comp153247_c0_seq1.path1;Name=comp153247_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=930;mismatches=0;indels=1;unknowns=0;Target=comp153247_c0_seq1 931 1 .;CDS_Target=comp153247_c0_seq1 814 749 .;locus=RLOC_00005524
Chr1	stalkie_big_nohaplotig	exon	8751907	8752836	99	+	.	Parent=comp153247_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8752655	8752719	.	+	0	Parent=comp153247_c0_seq1.mrna1
Chr1	gffcl	locus	8754133	8755113	.	+	.	ID=RLOC_00005525;geneIDs=comp157139_c0_seq1.path1;transcripts=comp157139_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8754133	8755113	.	+	.	ID=comp157139_c0_seq1.mrna1;geneID=comp157139_c0_seq1.path1;Name=comp157139_c0_seq1;Dir=indeterminatecoverage=95.4;identity=98.7;matches=970;mismatches=11;indels=2;unknowns=0;Target=comp157139_c0_seq1 1030 48 .;CDS_Target=comp157139_c0_seq1 194 48 .;locus=RLOC_00005525
Chr1	stalkie_big_nohaplotig	exon	8754133	8755113	98	+	.	Parent=comp157139_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8754133	8754279	.	+	0	Parent=comp157139_c0_seq1.mrna1
Chr1	gffcl	locus	8755115	8755647	.	+	.	ID=RLOC_00005526;geneIDs=comp155857_c0_seq1.path1;transcripts=comp155857_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8755115	8755647	.	+	.	ID=comp155857_c0_seq1.mrna1;geneID=comp155857_c0_seq1.path1;Name=comp155857_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=530;mismatches=3;indels=0;unknowns=0;Target=comp155857_c0_seq1 533 1 .;CDS_Target=comp155857_c0_seq1 402 250 .;locus=RLOC_00005526
Chr1	stalkie_big_nohaplotig	exon	8755115	8755647	99	+	.	Parent=comp155857_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8755364	8755516	.	+	0	Parent=comp155857_c0_seq1.mrna1
Chr1	gffcl	locus	8756444	8756722	.	-	.	ID=RLOC_00005527;geneIDs=comp150177_c0_seq1.path1;transcripts=comp150177_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8756444	8756722	.	-	.	ID=comp150177_c0_seq1.mrna1;geneID=comp150177_c0_seq1.path1;Name=comp150177_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=276;mismatches=3;indels=0;unknowns=0;Target=comp150177_c0_seq1 279 1 .;CDS_Target=comp150177_c0_seq1 73 2 .;locus=RLOC_00005527
Chr1	stalkie_big_nohaplotig	exon	8756444	8756722	98	-	.	Parent=comp150177_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8756650	8756721	.	-	0	Parent=comp150177_c0_seq1.mrna1
Chr1	gffcl	locus	8756809	8757061	.	-	.	ID=RLOC_00005528;geneIDs=comp145059_c0_seq1.path1;transcripts=comp145059_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8756809	8757061	.	-	.	ID=comp145059_c0_seq1.mrna1;geneID=comp145059_c0_seq1.path1;Name=comp145059_c0_seq1;Dir=indeterminatecoverage=86.1;identity=98.8;matches=250;mismatches=3;indels=0;unknowns=0;Target=comp145059_c0_seq1 294 42 .;CDS_Target=comp145059_c0_seq1 85 44 .;locus=RLOC_00005528
Chr1	stalkie_big_nohaplotig	exon	8756809	8757061	98	-	.	Parent=comp145059_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8757018	8757059	.	-	0	Parent=comp145059_c0_seq1.mrna1
Chr1	gffcl	locus	8761345	10376281	.	.	.	ID=RLOC_00005529;geneIDs=comp113435_c0_seq1.path1,comp117903_c0_seq1.path1,comp1054688_c0_seq1.path1;transcripts=comp1054688_c0_seq1.mrna1,comp113435_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8761345	10376281	.	-	.	ID=comp1054688_c0_seq1.mrna1;geneID=comp1054688_c0_seq1.path1;Name=comp1054688_c0_seq1;Dir=indeterminatecoverage=94.8;identity=99.6;matches=490;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005529
Chr1	stalkie_big_nohaplotig	exon	8761345	8761346	100	-	.	Parent=comp1054688_c0_seq1.mrna1;Target=comp1054688_c0_seq1 492 491 .
Chr1	stalkie_big_nohaplotig	exon	8775306	8775308	100	-	.	Parent=comp1054688_c0_seq1.mrna1;Target=comp1054688_c0_seq1 490 488 .
Chr1	stalkie_big_nohaplotig	exon	8781363	8781368	100	-	.	Parent=comp1054688_c0_seq1.mrna1;Target=comp1054688_c0_seq1 487 482 .
Chr1	stalkie_big_nohaplotig	exon	10375801	10376281	99	-	.	Parent=comp1054688_c0_seq1.mrna1;Target=comp1054688_c0_seq1 481 1 .
Chr1	stalkie_big_nohaplotig	CDS	8775306	8775308	.	-	0	Parent=comp1054688_c0_seq1.mrna1;Target=comp1054688_c0_seq1 490 488 .
Chr1	stalkie_big_nohaplotig	CDS	8781363	8781368	.	-	0	Parent=comp1054688_c0_seq1.mrna1;Target=comp1054688_c0_seq1 487 482 .
Chr1	stalkie_big_nohaplotig	CDS	10375801	10375884	.	-	0	Parent=comp1054688_c0_seq1.mrna1;Target=comp1054688_c0_seq1 481 398 .
Chr1	stalkie_big_nohaplotig	mRNA	10374073	10375063	.	-	.	ID=comp113435_c0_seq1.mrna1;geneID=comp113435_c0_seq1.path1;Name=comp113435_c0_seq1;Dir=indeterminatecoverage=99.0;identity=97.6;matches=976;mismatches=7;indels=17;unknowns=0;Target=comp113435_c0_seq1 1002 11 .;CDS_Target=comp113435_c0_seq1 907 578 .;locus=RLOC_00005529
Chr1	stalkie_big_nohaplotig	exon	10374073	10375063	97	-	.	Parent=comp113435_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	10374168	10374497	.	-	0	Parent=comp113435_c0_seq1.mrna1
Chr1	gffcl	locus	8762222	8762617	.	-	.	ID=RLOC_00005530;geneIDs=FBgn0035675.1.path1;transcripts=FBgn0035675.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8762222	8762617	.	-	.	ID=FBgn0035675.1.mrna1;geneID=FBgn0035675.1.path1;Name=FBgn0035675.1;Dir=sensecoverage=100.0;identity=100.0;matches=285;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005530
Chr1	stalkie_big_nohaplotig	exon	8762222	8762248	100	-	.	Parent=FBgn0035675.1.mrna1;Target=FBgn0035675.1 259 285 +
Chr1	stalkie_big_nohaplotig	exon	8762303	8762499	100	-	.	Parent=FBgn0035675.1.mrna1;Target=FBgn0035675.1 62 258 +
Chr1	stalkie_big_nohaplotig	exon	8762557	8762617	100	-	.	Parent=FBgn0035675.1.mrna1;Target=FBgn0035675.1 1 61 +
Chr1	stalkie_big_nohaplotig	CDS	8762222	8762248	.	-	0	Parent=FBgn0035675.1.mrna1;Target=FBgn0035675.1 259 285 +
Chr1	stalkie_big_nohaplotig	CDS	8762303	8762499	.	-	2	Parent=FBgn0035675.1.mrna1;Target=FBgn0035675.1 62 258 +
Chr1	stalkie_big_nohaplotig	CDS	8762557	8762617	.	-	0	Parent=FBgn0035675.1.mrna1;Target=FBgn0035675.1 1 61 +
Chr1	gffcl	locus	8766219	8774709	.	+	.	ID=RLOC_00005531;geneIDs=FBgn0035676.path1;transcripts=FBgn0035676.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8766219	8774709	.	+	.	ID=FBgn0035676.mrna1;geneID=FBgn0035676.path1;Name=FBgn0035676;Dir=sensecoverage=98.9;identity=99.8;matches=1262;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005531
Chr1	stalkie_big_nohaplotig	exon	8766219	8766533	100	+	.	Parent=FBgn0035676.mrna1;Target=FBgn0035676 1 315 +
Chr1	stalkie_big_nohaplotig	exon	8772346	8772708	99	+	.	Parent=FBgn0035676.mrna1;Target=FBgn0035676 316 678 +
Chr1	stalkie_big_nohaplotig	exon	8772787	8773372	99	+	.	Parent=FBgn0035676.mrna1;Target=FBgn0035676 679 1264 +
Chr1	stalkie_big_nohaplotig	exon	8774077	8774709	99	+	.	Parent=FBgn0035676.mrna1;Target=FBgn0035676 633 1 .
Chr1	stalkie_big_nohaplotig	CDS	8766219	8766533	100	+	0	Parent=FBgn0035676.mrna1;Target=FBgn0035676 1 315 +
Chr1	stalkie_big_nohaplotig	CDS	8772346	8772708	99	+	0	Parent=FBgn0035676.mrna1;Target=FBgn0035676 316 678 +
Chr1	stalkie_big_nohaplotig	CDS	8772787	8773371	99	+	0	Parent=FBgn0035676.mrna1;Target=FBgn0035676 679 1263 +
Chr1	stalkie_big_nohaplotig	CDS	8774077	8774709	99	+	0	Parent=FBgn0035676.mrna1;Target=FBgn0035676 633 1 .
Chr1	gffcl	locus	8788482	8792952	.	+	.	ID=RLOC_00005532;geneIDs=FBgn0035677.1.path1;transcripts=FBgn0035677.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8788482	8792952	.	+	.	ID=FBgn0035677.1.mrna1;geneID=FBgn0035677.1.path1;Name=FBgn0035677.1;Dir=sensecoverage=100.0;identity=99.8;matches=1797;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005532
Chr1	stalkie_big_nohaplotig	exon	8788482	8788585	100	+	.	Parent=FBgn0035677.1.mrna1;Target=FBgn0035677.1 1 104 +
Chr1	stalkie_big_nohaplotig	exon	8788659	8788841	99	+	.	Parent=FBgn0035677.1.mrna1;Target=FBgn0035677.1 105 287 +
Chr1	stalkie_big_nohaplotig	exon	8790260	8790490	100	+	.	Parent=FBgn0035677.1.mrna1;Target=FBgn0035677.1 288 518 +
Chr1	stalkie_big_nohaplotig	exon	8790556	8790678	100	+	.	Parent=FBgn0035677.1.mrna1;Target=FBgn0035677.1 519 641 +
Chr1	stalkie_big_nohaplotig	exon	8791264	8791407	99	+	.	Parent=FBgn0035677.1.mrna1;Target=FBgn0035677.1 642 785 +
Chr1	stalkie_big_nohaplotig	exon	8791481	8791794	100	+	.	Parent=FBgn0035677.1.mrna1;Target=FBgn0035677.1 786 1099 +
Chr1	stalkie_big_nohaplotig	exon	8791868	8792122	100	+	.	Parent=FBgn0035677.1.mrna1;Target=FBgn0035677.1 1100 1354 +
Chr1	stalkie_big_nohaplotig	exon	8792187	8792390	99	+	.	Parent=FBgn0035677.1.mrna1;Target=FBgn0035677.1 1355 1558 +
Chr1	stalkie_big_nohaplotig	exon	8792711	8792952	100	+	.	Parent=FBgn0035677.1.mrna1;Target=FBgn0035677.1 1559 1800 +
Chr1	stalkie_big_nohaplotig	CDS	8788482	8788585	.	+	0	Parent=FBgn0035677.1.mrna1;Target=FBgn0035677.1 1 104 +
Chr1	stalkie_big_nohaplotig	CDS	8788659	8788841	.	+	1	Parent=FBgn0035677.1.mrna1;Target=FBgn0035677.1 105 287 +
Chr1	stalkie_big_nohaplotig	CDS	8790260	8790490	.	+	1	Parent=FBgn0035677.1.mrna1;Target=FBgn0035677.1 288 518 +
Chr1	stalkie_big_nohaplotig	CDS	8790556	8790678	.	+	1	Parent=FBgn0035677.1.mrna1;Target=FBgn0035677.1 519 641 +
Chr1	stalkie_big_nohaplotig	CDS	8791264	8791407	.	+	1	Parent=FBgn0035677.1.mrna1;Target=FBgn0035677.1 642 785 +
Chr1	stalkie_big_nohaplotig	CDS	8791481	8791794	.	+	1	Parent=FBgn0035677.1.mrna1;Target=FBgn0035677.1 786 1099 +
Chr1	stalkie_big_nohaplotig	CDS	8791868	8792122	.	+	2	Parent=FBgn0035677.1.mrna1;Target=FBgn0035677.1 1100 1354 +
Chr1	stalkie_big_nohaplotig	CDS	8792187	8792390	.	+	2	Parent=FBgn0035677.1.mrna1;Target=FBgn0035677.1 1355 1558 +
Chr1	stalkie_big_nohaplotig	CDS	8792711	8792952	.	+	2	Parent=FBgn0035677.1.mrna1;Target=FBgn0035677.1 1559 1800 +
Chr1	gffcl	locus	8794271	8794544	.	-	.	ID=RLOC_00005533;geneIDs=comp206116_c0_seq1.path1;transcripts=comp206116_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8794271	8794544	.	-	.	ID=comp206116_c0_seq1.mrna1;geneID=comp206116_c0_seq1.path1;Name=comp206116_c0_seq1;Dir=indeterminatecoverage=95.8;identity=100.0;matches=274;mismatches=0;indels=0;unknowns=0;Target=comp206116_c0_seq1 286 13 .;CDS_Target=comp206116_c0_seq1 213 13 .;locus=RLOC_00005533
Chr1	stalkie_big_nohaplotig	exon	8794271	8794544	100	-	.	Parent=comp206116_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8794344	8794544	.	-	0	Parent=comp206116_c0_seq1.mrna1
Chr1	gffcl	locus	8796036	8799518	.	+	.	ID=RLOC_00005534;geneIDs=FBgn0061492.1.path1;transcripts=FBgn0061492.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8796036	8799518	.	+	.	ID=FBgn0061492.1.mrna1;geneID=FBgn0061492.1.path1;Name=FBgn0061492.1;Dir=sensecoverage=100.0;identity=99.6;matches=768;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005534
Chr1	stalkie_big_nohaplotig	exon	8796036	8796320	100	+	.	Parent=FBgn0061492.1.mrna1;Target=FBgn0061492.1 1 285 +
Chr1	stalkie_big_nohaplotig	exon	8796379	8796642	99	+	.	Parent=FBgn0061492.1.mrna1;Target=FBgn0061492.1 286 549 +
Chr1	stalkie_big_nohaplotig	exon	8799230	8799397	100	+	.	Parent=FBgn0061492.1.mrna1;Target=FBgn0061492.1 550 717 +
Chr1	stalkie_big_nohaplotig	exon	8799465	8799518	98	+	.	Parent=FBgn0061492.1.mrna1;Target=FBgn0061492.1 718 771 +
Chr1	stalkie_big_nohaplotig	CDS	8796036	8796320	.	+	0	Parent=FBgn0061492.1.mrna1;Target=FBgn0061492.1 1 285 +
Chr1	stalkie_big_nohaplotig	CDS	8796379	8796642	.	+	0	Parent=FBgn0061492.1.mrna1;Target=FBgn0061492.1 286 549 +
Chr1	stalkie_big_nohaplotig	CDS	8799230	8799397	.	+	0	Parent=FBgn0061492.1.mrna1;Target=FBgn0061492.1 550 717 +
Chr1	stalkie_big_nohaplotig	CDS	8799465	8799518	.	+	0	Parent=FBgn0061492.1.mrna1;Target=FBgn0061492.1 718 771 +
Chr1	gffcl	locus	8838586	8864911	.	+	.	ID=RLOC_00005535;geneIDs=FBgn0005658.1.path1;transcripts=FBgn0005658.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8838586	8864911	.	+	.	ID=FBgn0005658.1.mrna1;geneID=FBgn0005658.1.path1;Name=FBgn0005658.1;Dir=sensecoverage=98.6;identity=99.9;matches=815;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005535
Chr1	stalkie_big_nohaplotig	exon	8838586	8838685	100	+	.	Parent=FBgn0005658.1.mrna1;Target=FBgn0005658.1 13 112 +
Chr1	stalkie_big_nohaplotig	exon	8839613	8839663	100	+	.	Parent=FBgn0005658.1.mrna1;Target=FBgn0005658.1 113 163 +
Chr1	stalkie_big_nohaplotig	exon	8843415	8843498	100	+	.	Parent=FBgn0005658.1.mrna1;Target=FBgn0005658.1 164 247 +
Chr1	stalkie_big_nohaplotig	exon	8846580	8846627	100	+	.	Parent=FBgn0005658.1.mrna1;Target=FBgn0005658.1 248 295 +
Chr1	stalkie_big_nohaplotig	exon	8856321	8856510	100	+	.	Parent=FBgn0005658.1.mrna1;Target=FBgn0005658.1 296 485 +
Chr1	stalkie_big_nohaplotig	exon	8864503	8864711	100	+	.	Parent=FBgn0005658.1.mrna1;Target=FBgn0005658.1 486 694 +
Chr1	stalkie_big_nohaplotig	exon	8864778	8864911	99	+	.	Parent=FBgn0005658.1.mrna1;Target=FBgn0005658.1 695 828 +
Chr1	stalkie_big_nohaplotig	CDS	8838586	8838685	.	+	0	Parent=FBgn0005658.1.mrna1;Target=FBgn0005658.1 13 112 +
Chr1	stalkie_big_nohaplotig	CDS	8839613	8839663	.	+	2	Parent=FBgn0005658.1.mrna1;Target=FBgn0005658.1 113 163 +
Chr1	stalkie_big_nohaplotig	CDS	8843415	8843498	.	+	2	Parent=FBgn0005658.1.mrna1;Target=FBgn0005658.1 164 247 +
Chr1	stalkie_big_nohaplotig	CDS	8846580	8846627	.	+	2	Parent=FBgn0005658.1.mrna1;Target=FBgn0005658.1 248 295 +
Chr1	stalkie_big_nohaplotig	CDS	8856321	8856510	.	+	2	Parent=FBgn0005658.1.mrna1;Target=FBgn0005658.1 296 485 +
Chr1	stalkie_big_nohaplotig	CDS	8864503	8864711	.	+	1	Parent=FBgn0005658.1.mrna1;Target=FBgn0005658.1 486 694 +
Chr1	stalkie_big_nohaplotig	CDS	8864778	8864911	.	+	2	Parent=FBgn0005658.1.mrna1;Target=FBgn0005658.1 695 828 +
Chr1	gffcl	locus	8866115	8866670	.	-	.	ID=RLOC_00005536;geneIDs=comp152030_c0_seq1.path1;transcripts=comp152030_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8866115	8866670	.	-	.	ID=comp152030_c0_seq1.mrna1;geneID=comp152030_c0_seq1.path1;Name=comp152030_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=552;mismatches=4;indels=5;unknowns=0;Target=comp152030_c0_seq1 561 1 .;CDS_Target=comp152030_c0_seq1 413 315 .;locus=RLOC_00005536
Chr1	stalkie_big_nohaplotig	exon	8866115	8866670	98	-	.	Parent=comp152030_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8866263	8866356	.	-	0	Parent=comp152030_c0_seq1.mrna1
Chr1	gffcl	locus	8866943	10806796	.	+	.	ID=RLOC_00005537;geneIDs=comp156715_c0_seq1.path1;transcripts=comp156715_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8866943	10806796	.	+	.	ID=comp156715_c0_seq1.mrna1;geneID=comp156715_c0_seq1.path1;Name=comp156715_c0_seq1;Dir=indeterminatecoverage=67.7;identity=97.2;matches=619;mismatches=18;indels=0;unknowns=0;locus=RLOC_00005537
Chr1	stalkie_big_nohaplotig	exon	8866943	8867459	97	+	.	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 517 1 .
Chr1	stalkie_big_nohaplotig	exon	10693443	10693452	70	+	.	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 527 518 .
Chr1	stalkie_big_nohaplotig	exon	10699927	10699930	100	+	.	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 531 528 .
Chr1	stalkie_big_nohaplotig	exon	10705591	10705597	100	+	.	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 538 532 .
Chr1	stalkie_big_nohaplotig	exon	10711651	10711652	100	+	.	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 540 539 .
Chr1	stalkie_big_nohaplotig	exon	10718860	10718862	100	+	.	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 543 541 .
Chr1	stalkie_big_nohaplotig	exon	10724067	10724072	100	+	.	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 549 544 .
Chr1	stalkie_big_nohaplotig	exon	10726548	10726556	100	+	.	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 558 550 .
Chr1	stalkie_big_nohaplotig	exon	10732446	10732455	100	+	.	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 568 559 .
Chr1	stalkie_big_nohaplotig	exon	10762203	10762211	88	+	.	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 577 569 .
Chr1	stalkie_big_nohaplotig	exon	10762235	10762236	100	+	.	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 638 637 .
Chr1	stalkie_big_nohaplotig	exon	10765142	10765152	100	+	.	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 649 639 .
Chr1	stalkie_big_nohaplotig	exon	10780771	10780787	82	+	.	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 685 669 .
Chr1	stalkie_big_nohaplotig	exon	10782052	10782056	100	+	.	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 690 686 .
Chr1	stalkie_big_nohaplotig	exon	10787639	10787644	100	+	.	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 696 691 .
Chr1	stalkie_big_nohaplotig	exon	10791750	10791752	100	+	.	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 699 697 .
Chr1	stalkie_big_nohaplotig	exon	10796126	10796129	100	+	.	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 703 700 .
Chr1	stalkie_big_nohaplotig	exon	10803583	10803586	100	+	.	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 707 704 .
Chr1	stalkie_big_nohaplotig	exon	10806790	10806796	100	+	.	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 714 708 .
Chr1	stalkie_big_nohaplotig	CDS	8867375	8867459	.	+	0	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 517 433 .
Chr1	stalkie_big_nohaplotig	CDS	10693443	10693452	.	+	2	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 527 518 .
Chr1	stalkie_big_nohaplotig	CDS	10699927	10699930	.	+	1	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 531 528 .
Chr1	stalkie_big_nohaplotig	CDS	10705591	10705597	.	+	0	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 538 532 .
Chr1	stalkie_big_nohaplotig	CDS	10711651	10711652	.	+	2	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 540 539 .
Chr1	stalkie_big_nohaplotig	CDS	10718860	10718862	.	+	0	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 543 541 .
Chr1	stalkie_big_nohaplotig	CDS	10724067	10724072	.	+	0	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 549 544 .
Chr1	stalkie_big_nohaplotig	CDS	10726548	10726556	.	+	0	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 558 550 .
Chr1	stalkie_big_nohaplotig	CDS	10732446	10732455	.	+	0	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 568 559 .
Chr1	stalkie_big_nohaplotig	CDS	10762203	10762211	.	+	2	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 577 569 .
Chr1	stalkie_big_nohaplotig	CDS	10762235	10762236	.	+	2	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 638 637 .
Chr1	stalkie_big_nohaplotig	CDS	10765142	10765152	.	+	0	Parent=comp156715_c0_seq1.mrna1;Target=comp156715_c0_seq1 649 639 .
Chr1	gffcl	locus	8868514	8869055	.	-	.	ID=RLOC_00005538;geneIDs=comp158101_c0_seq1.path1;transcripts=comp158101_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8868514	8869055	.	-	.	ID=comp158101_c0_seq1.mrna1;geneID=comp158101_c0_seq1.path1;Name=comp158101_c0_seq1;Dir=indeterminatecoverage=77.5;identity=96.7;matches=525;mismatches=16;indels=2;unknowns=0;Target=comp158101_c0_seq1 544 3 .;CDS_Target=comp158101_c0_seq1 467 399 .;locus=RLOC_00005538
Chr1	stalkie_big_nohaplotig	exon	8868514	8869055	96	-	.	Parent=comp158101_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8868592	8868660	.	-	0	Parent=comp158101_c0_seq1.mrna1
Chr1	gffcl	locus	8869118	8869424	.	-	.	ID=RLOC_00005539;geneIDs=comp970588_c0_seq1.path1;transcripts=comp970588_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8869118	8869424	.	-	.	ID=comp970588_c0_seq1.mrna1;geneID=comp970588_c0_seq1.path1;Name=comp970588_c0_seq1;Dir=indeterminatecoverage=96.5;identity=100.0;matches=307;mismatches=0;indels=0;unknowns=0;Target=comp970588_c0_seq1 316 10 .;CDS_Target=comp970588_c0_seq1 94 11 .;locus=RLOC_00005539
Chr1	stalkie_big_nohaplotig	exon	8869118	8869424	100	-	.	Parent=comp970588_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8869340	8869423	.	-	0	Parent=comp970588_c0_seq1.mrna1
Chr1	gffcl	locus	8871424	8881072	.	-	.	ID=RLOC_00005540;geneIDs=FBgn0002440.1.path1;transcripts=FBgn0002440.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8871424	8881072	.	-	.	ID=FBgn0002440.1.mrna1;geneID=FBgn0002440.1.path1;Name=FBgn0002440.1;Dir=sensecoverage=99.7;identity=98.8;matches=2064;mismatches=26;indels=0;unknowns=0;locus=RLOC_00005540
Chr1	stalkie_big_nohaplotig	exon	8871424	8873212	98	-	.	Parent=FBgn0002440.1.mrna1;Target=FBgn0002440.1 302 2090 +
Chr1	stalkie_big_nohaplotig	exon	8873271	8873408	100	-	.	Parent=FBgn0002440.1.mrna1;Target=FBgn0002440.1 164 301 +
Chr1	stalkie_big_nohaplotig	exon	8880851	8880956	100	-	.	Parent=FBgn0002440.1.mrna1;Target=FBgn0002440.1 58 163 +
Chr1	stalkie_big_nohaplotig	exon	8881016	8881072	100	-	.	Parent=FBgn0002440.1.mrna1;Target=FBgn0002440.1 1 57 +
Chr1	stalkie_big_nohaplotig	CDS	8871426	8873212	.	-	2	Parent=FBgn0002440.1.mrna1;Target=FBgn0002440.1 302 2088 +
Chr1	stalkie_big_nohaplotig	CDS	8873271	8873408	.	-	2	Parent=FBgn0002440.1.mrna1;Target=FBgn0002440.1 164 301 +
Chr1	stalkie_big_nohaplotig	CDS	8880851	8880956	.	-	0	Parent=FBgn0002440.1.mrna1;Target=FBgn0002440.1 58 163 +
Chr1	stalkie_big_nohaplotig	CDS	8881016	8881072	.	-	0	Parent=FBgn0002440.1.mrna1;Target=FBgn0002440.1 1 57 +
Chr1	gffcl	locus	8901478	8902115	.	-	.	ID=RLOC_00005541;geneIDs=FBgn0042119.1.path1;transcripts=FBgn0042119.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8901478	8902115	.	-	.	ID=FBgn0042119.1.mrna1;geneID=FBgn0042119.1.path1;Name=FBgn0042119.1;Dir=sensecoverage=100.0;identity=99.3;matches=417;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005541
Chr1	stalkie_big_nohaplotig	exon	8901478	8901655	99	-	.	Parent=FBgn0042119.1.mrna1;Target=FBgn0042119.1 243 420 +
Chr1	stalkie_big_nohaplotig	exon	8901874	8902115	99	-	.	Parent=FBgn0042119.1.mrna1;Target=FBgn0042119.1 1 242 +
Chr1	stalkie_big_nohaplotig	CDS	8901478	8901655	.	-	1	Parent=FBgn0042119.1.mrna1;Target=FBgn0042119.1 243 420 +
Chr1	stalkie_big_nohaplotig	CDS	8901874	8902115	.	-	0	Parent=FBgn0042119.1.mrna1;Target=FBgn0042119.1 1 242 +
Chr1	gffcl	locus	8902831	8912081	.	-	.	ID=RLOC_00005542;geneIDs=comp153485_c0_seq1.path1;transcripts=comp153485_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8902831	8912081	.	-	.	ID=comp153485_c0_seq1.mrna1;geneID=comp153485_c0_seq1.path1;Name=comp153485_c0_seq1;Dir=indeterminatecoverage=72.2;identity=79.3;matches=415;mismatches=58;indels=50;unknowns=0;Target=comp153485_c0_seq1 411 400 .;locus=RLOC_00005542
Chr1	stalkie_big_nohaplotig	exon	8902831	8903230	87	-	.	Parent=comp153485_c0_seq1.mrna1;Target=comp153485_c0_seq1 726 317 .
Chr1	stalkie_big_nohaplotig	exon	8905785	8905840	40	-	.	Parent=comp153485_c0_seq1.mrna1;Target=comp153485_c0_seq1 316 237 .
Chr1	stalkie_big_nohaplotig	exon	8906884	8906893	100	-	.	Parent=comp153485_c0_seq1.mrna1;Target=comp153485_c0_seq1 227 218 .
Chr1	stalkie_big_nohaplotig	exon	8912067	8912081	80	-	.	Parent=comp153485_c0_seq1.mrna1;Target=comp153485_c0_seq1 217 203 .
Chr1	stalkie_big_nohaplotig	CDS	8903136	8903147	.	-	0	Parent=comp153485_c0_seq1.mrna1
Chr1	gffcl	locus	8903460	8903855	.	+	.	ID=RLOC_00005543;geneIDs=comp150631_c0_seq1.path1;transcripts=comp150631_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8903460	8903855	.	+	.	ID=comp150631_c0_seq1.mrna1;geneID=comp150631_c0_seq1.path1;Name=comp150631_c0_seq1;Dir=indeterminatecoverage=99.7;identity=97.5;matches=386;mismatches=9;indels=1;unknowns=0;Target=comp150631_c0_seq1 396 2 .;CDS_Target=comp150631_c0_seq1 359 294 .;locus=RLOC_00005543
Chr1	stalkie_big_nohaplotig	exon	8903460	8903855	97	+	.	Parent=comp150631_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8903753	8903818	.	+	0	Parent=comp150631_c0_seq1.mrna1
Chr1	gffcl	locus	8905410	8907386	.	-	.	ID=RLOC_00005544;geneIDs=FBgn0052405.1.path1;transcripts=FBgn0052405.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8905410	8907386	.	-	.	ID=FBgn0052405.1.mrna1;geneID=FBgn0052405.1.path1;Name=FBgn0052405.1;Dir=sensecoverage=100.0;identity=100.0;matches=378;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005544
Chr1	stalkie_big_nohaplotig	exon	8905410	8905596	100	-	.	Parent=FBgn0052405.1.mrna1;Target=FBgn0052405.1 192 378 +
Chr1	stalkie_big_nohaplotig	exon	8907196	8907386	100	-	.	Parent=FBgn0052405.1.mrna1;Target=FBgn0052405.1 1 191 +
Chr1	stalkie_big_nohaplotig	CDS	8905410	8905596	.	-	1	Parent=FBgn0052405.1.mrna1;Target=FBgn0052405.1 192 378 +
Chr1	stalkie_big_nohaplotig	CDS	8907196	8907386	.	-	0	Parent=FBgn0052405.1.mrna1;Target=FBgn0052405.1 1 191 +
Chr1	gffcl	locus	8914693	8915172	.	-	.	ID=RLOC_00005545;geneIDs=FBgn0052405.2.path1;transcripts=FBgn0052405.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8914693	8915172	.	-	.	ID=FBgn0052405.2.mrna1;geneID=FBgn0052405.2.path1;Name=FBgn0052405.2;Dir=sensecoverage=100.0;identity=99.4;matches=349;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005545
Chr1	stalkie_big_nohaplotig	exon	8914693	8914888	99	-	.	Parent=FBgn0052405.2.mrna1;Target=FBgn0052405.2 156 351 +
Chr1	stalkie_big_nohaplotig	exon	8915018	8915172	99	-	.	Parent=FBgn0052405.2.mrna1;Target=FBgn0052405.2 1 155 +
Chr1	stalkie_big_nohaplotig	CDS	8914693	8914888	.	-	1	Parent=FBgn0052405.2.mrna1;Target=FBgn0052405.2 156 351 +
Chr1	stalkie_big_nohaplotig	CDS	8915018	8915172	.	-	0	Parent=FBgn0052405.2.mrna1;Target=FBgn0052405.2 1 155 +
Chr1	gffcl	locus	8922999	8923470	.	+	.	ID=RLOC_00005546;geneIDs=FBgn0020641.1.path1;transcripts=FBgn0020641.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8922999	8923470	.	+	.	ID=FBgn0020641.1.mrna1;geneID=FBgn0020641.1.path1;Name=FBgn0020641.1;Dir=sensecoverage=100.0;identity=99.7;matches=326;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005546
Chr1	stalkie_big_nohaplotig	exon	8922999	8923138	99	+	.	Parent=FBgn0020641.1.mrna1;Target=FBgn0020641.1 1 140 +
Chr1	stalkie_big_nohaplotig	exon	8923284	8923470	100	+	.	Parent=FBgn0020641.1.mrna1;Target=FBgn0020641.1 141 327 +
Chr1	stalkie_big_nohaplotig	CDS	8922999	8923138	.	+	0	Parent=FBgn0020641.1.mrna1;Target=FBgn0020641.1 1 140 +
Chr1	stalkie_big_nohaplotig	CDS	8923284	8923470	.	+	1	Parent=FBgn0020641.1.mrna1;Target=FBgn0020641.1 141 327 +
Chr1	gffcl	locus	8955638	8957692	.	-	.	ID=RLOC_00005549;geneIDs=FBgn0035452.1.path1;transcripts=FBgn0035452.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8955638	8957692	.	-	.	ID=FBgn0035452.1.mrna1;geneID=FBgn0035452.1.path1;Name=FBgn0035452.1;Dir=sensecoverage=100.0;identity=98.7;matches=924;mismatches=12;indels=0;unknowns=0;locus=RLOC_00005549
Chr1	stalkie_big_nohaplotig	exon	8955638	8955749	98	-	.	Parent=FBgn0035452.1.mrna1;Target=FBgn0035452.1 825 936 +
Chr1	stalkie_big_nohaplotig	exon	8955804	8956334	98	-	.	Parent=FBgn0035452.1.mrna1;Target=FBgn0035452.1 294 824 +
Chr1	stalkie_big_nohaplotig	exon	8956394	8956430	94	-	.	Parent=FBgn0035452.1.mrna1;Target=FBgn0035452.1 257 293 +
Chr1	stalkie_big_nohaplotig	exon	8957201	8957226	100	-	.	Parent=FBgn0035452.1.mrna1;Target=FBgn0035452.1 231 256 +
Chr1	stalkie_big_nohaplotig	exon	8957290	8957354	100	-	.	Parent=FBgn0035452.1.mrna1;Target=FBgn0035452.1 166 230 +
Chr1	stalkie_big_nohaplotig	exon	8957417	8957494	100	-	.	Parent=FBgn0035452.1.mrna1;Target=FBgn0035452.1 88 165 +
Chr1	stalkie_big_nohaplotig	exon	8957606	8957692	98	-	.	Parent=FBgn0035452.1.mrna1;Target=FBgn0035452.1 1 87 +
Chr1	stalkie_big_nohaplotig	CDS	8955638	8955749	.	-	1	Parent=FBgn0035452.1.mrna1;Target=FBgn0035452.1 825 936 +
Chr1	stalkie_big_nohaplotig	CDS	8955804	8956334	.	-	1	Parent=FBgn0035452.1.mrna1;Target=FBgn0035452.1 294 824 +
Chr1	stalkie_big_nohaplotig	CDS	8956394	8956430	.	-	2	Parent=FBgn0035452.1.mrna1;Target=FBgn0035452.1 257 293 +
Chr1	stalkie_big_nohaplotig	CDS	8957201	8957226	.	-	1	Parent=FBgn0035452.1.mrna1;Target=FBgn0035452.1 231 256 +
Chr1	stalkie_big_nohaplotig	CDS	8957290	8957354	.	-	0	Parent=FBgn0035452.1.mrna1;Target=FBgn0035452.1 166 230 +
Chr1	stalkie_big_nohaplotig	CDS	8957417	8957494	.	-	0	Parent=FBgn0035452.1.mrna1;Target=FBgn0035452.1 88 165 +
Chr1	stalkie_big_nohaplotig	CDS	8957606	8957692	.	-	0	Parent=FBgn0035452.1.mrna1;Target=FBgn0035452.1 1 87 +
Chr1	gffcl	locus	8956410	9048081	.	+	.	ID=RLOC_00005550;geneIDs=comp159842_c0_seq1.path1;transcripts=comp159842_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8956410	9048081	.	+	.	ID=comp159842_c0_seq1.mrna1;geneID=comp159842_c0_seq1.path1;Name=comp159842_c0_seq1;Dir=indeterminatecoverage=77.0;identity=87.5;matches=428;mismatches=37;indels=24;unknowns=0;Target=comp159842_c0_seq1 149 120 .;locus=RLOC_00005550
Chr1	stalkie_big_nohaplotig	exon	8956410	8956722	92	+	.	Parent=comp159842_c0_seq1.mrna1;Target=comp159842_c0_seq1 319 1 .
Chr1	stalkie_big_nohaplotig	exon	8959464	8959465	100	+	.	Parent=comp159842_c0_seq1.mrna1;Target=comp159842_c0_seq1 321 320 .
Chr1	stalkie_big_nohaplotig	exon	8963214	8963219	100	+	.	Parent=comp159842_c0_seq1.mrna1;Target=comp159842_c0_seq1 327 322 .
Chr1	stalkie_big_nohaplotig	exon	8971113	8971115	100	+	.	Parent=comp159842_c0_seq1.mrna1;Target=comp159842_c0_seq1 330 328 .
Chr1	stalkie_big_nohaplotig	exon	8975761	8975768	100	+	.	Parent=comp159842_c0_seq1.mrna1;Target=comp159842_c0_seq1 352 345 .
Chr1	stalkie_big_nohaplotig	exon	8982165	8982174	100	+	.	Parent=comp159842_c0_seq1.mrna1;Target=comp159842_c0_seq1 362 353 .
Chr1	stalkie_big_nohaplotig	exon	8987405	8987419	93	+	.	Parent=comp159842_c0_seq1.mrna1;Target=comp159842_c0_seq1 384 370 .
Chr1	stalkie_big_nohaplotig	exon	8994657	8994665	100	+	.	Parent=comp159842_c0_seq1.mrna1;Target=comp159842_c0_seq1 393 385 .
Chr1	stalkie_big_nohaplotig	exon	8998242	8998283	48	+	.	Parent=comp159842_c0_seq1.mrna1;Target=comp159842_c0_seq1 470 424 .
Chr1	stalkie_big_nohaplotig	exon	9008853	9008859	100	+	.	Parent=comp159842_c0_seq1.mrna1;Target=comp159842_c0_seq1 477 471 .
Chr1	stalkie_big_nohaplotig	exon	9009872	9009874	100	+	.	Parent=comp159842_c0_seq1.mrna1;Target=comp159842_c0_seq1 480 478 .
Chr1	stalkie_big_nohaplotig	exon	9018007	9018012	100	+	.	Parent=comp159842_c0_seq1.mrna1;Target=comp159842_c0_seq1 694 689 .
Chr1	stalkie_big_nohaplotig	exon	9039890	9039903	100	+	.	Parent=comp159842_c0_seq1.mrna1;Target=comp159842_c0_seq1 708 695 .
Chr1	stalkie_big_nohaplotig	exon	9047603	9047629	55	+	.	Parent=comp159842_c0_seq1.mrna1;Target=comp159842_c0_seq1 729 712 .
Chr1	stalkie_big_nohaplotig	exon	9048074	9048081	100	+	.	Parent=comp159842_c0_seq1.mrna1;Target=comp159842_c0_seq1 737 730 .
Chr1	stalkie_big_nohaplotig	CDS	8956528	8956552	.	+	0	Parent=comp159842_c0_seq1.mrna1
Chr1	gffcl	locus	8960260	8960577	.	-	.	ID=RLOC_00005551;geneIDs=comp142449_c0_seq1.path1;transcripts=comp142449_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8960260	8960577	.	-	.	ID=comp142449_c0_seq1.mrna1;geneID=comp142449_c0_seq1.path1;Name=comp142449_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=314;mismatches=3;indels=3;unknowns=0;Target=comp142449_c0_seq1 319 1 .;CDS_Target=comp142449_c0_seq1 219 148 .;locus=RLOC_00005551
Chr1	stalkie_big_nohaplotig	exon	8960260	8960577	98	-	.	Parent=comp142449_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	8960360	8960429	.	-	0	Parent=comp142449_c0_seq1.mrna1
Chr1	gffcl	locus	8963243	8966532	.	-	.	ID=RLOC_00005552;geneIDs=FBgn0035710.1.path1;transcripts=FBgn0035710.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	8963243	8966532	.	-	.	ID=FBgn0035710.1.mrna1;geneID=FBgn0035710.1.path1;Name=FBgn0035710.1;Dir=sensecoverage=100.0;identity=99.4;matches=2189;mismatches=13;indels=0;unknowns=0;locus=RLOC_00005552
Chr1	stalkie_big_nohaplotig	exon	8963243	8963583	98	-	.	Parent=FBgn0035710.1.mrna1;Target=FBgn0035710.1 1862 2202 +
Chr1	stalkie_big_nohaplotig	exon	8964366	8965149	99	-	.	Parent=FBgn0035710.1.mrna1;Target=FBgn0035710.1 1078 1861 +
Chr1	stalkie_big_nohaplotig	exon	8965213	8965358	100	-	.	Parent=FBgn0035710.1.mrna1;Target=FBgn0035710.1 932 1077 +
Chr1	stalkie_big_nohaplotig	exon	8965544	8966380	99	-	.	Parent=FBgn0035710.1.mrna1;Target=FBgn0035710.1 95 931 +
Chr1	stalkie_big_nohaplotig	exon	8966439	8966532	100	-	.	Parent=FBgn0035710.1.mrna1;Target=FBgn0035710.1 1 94 +
Chr1	stalkie_big_nohaplotig	CDS	8963243	8963583	.	-	2	Parent=FBgn0035710.1.mrna1;Target=FBgn0035710.1 1862 2202 +
Chr1	stalkie_big_nohaplotig	CDS	8964366	8965149	.	-	0	Parent=FBgn0035710.1.mrna1;Target=FBgn0035710.1 1078 1861 +
Chr1	stalkie_big_nohaplotig	CDS	8965213	8965358	.	-	2	Parent=FBgn0035710.1.mrna1;Target=FBgn0035710.1 932 1077 +
Chr1	stalkie_big_nohaplotig	CDS	8965544	8966380	.	-	2	Parent=FBgn0035710.1.mrna1;Target=FBgn0035710.1 95 931 +
Chr1	stalkie_big_nohaplotig	CDS	8966439	8966532	.	-	0	Parent=FBgn0035710.1.mrna1;Target=FBgn0035710.1 1 94 +
Chr1	gffcl	locus	9007002	9007203	.	-	.	ID=RLOC_00005553;geneIDs=comp141797_c0_seq1.path1;transcripts=comp141797_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9007002	9007203	.	-	.	ID=comp141797_c0_seq1.mrna1;geneID=comp141797_c0_seq1.path1;Name=comp141797_c0_seq1;Dir=indeterminatecoverage=92.1;identity=97.0;matches=196;mismatches=2;indels=4;unknowns=0;Target=comp141797_c0_seq1 198 1 .;CDS_Target=comp141797_c0_seq1 47 3 .;locus=RLOC_00005553
Chr1	stalkie_big_nohaplotig	exon	9007002	9007203	97	-	.	Parent=comp141797_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9007153	9007201	.	-	0	Parent=comp141797_c0_seq1.mrna1
Chr1	gffcl	locus	9015670	9015871	.	-	.	ID=RLOC_00005554;geneIDs=comp141797_c0_seq1.path2;transcripts=comp141797_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	9015670	9015871	.	-	.	ID=comp141797_c0_seq1.mrna2;geneID=comp141797_c0_seq1.path2;Name=comp141797_c0_seq1;Dir=indeterminatecoverage=92.1;identity=97.0;matches=196;mismatches=2;indels=4;unknowns=0;Target=comp141797_c0_seq1 198 1 .;CDS_Target=comp141797_c0_seq1 47 3 .;locus=RLOC_00005554
Chr1	stalkie_big_nohaplotig	exon	9015670	9015871	97	-	.	Parent=comp141797_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	9015821	9015869	.	-	0	Parent=comp141797_c0_seq1.mrna2
Chr1	gffcl	locus	9026440	9026910	.	+	.	ID=RLOC_00005555;geneIDs=comp150279_c0_seq1.path1;transcripts=comp150279_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9026440	9026910	.	+	.	ID=comp150279_c0_seq1.mrna1;geneID=comp150279_c0_seq1.path1;Name=comp150279_c0_seq1;Dir=indeterminatecoverage=98.1;identity=99.4;matches=468;mismatches=3;indels=0;unknowns=0;Target=comp150279_c0_seq1 471 1 .;CDS_Target=comp150279_c0_seq1 417 316 .;locus=RLOC_00005555
Chr1	stalkie_big_nohaplotig	exon	9026440	9026910	99	+	.	Parent=comp150279_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9026755	9026856	.	+	0	Parent=comp150279_c0_seq1.mrna1
Chr1	gffcl	locus	9027185	9035716	.	.	.	ID=RLOC_00005556;geneIDs=FBgn0035711.2.path1,comp2193621_c0_seq1.path1;transcripts=FBgn0035711.2.mrna1,comp2193621_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9027185	9035716	.	+	.	ID=FBgn0035711.2.mrna1;geneID=FBgn0035711.2.path1;Name=FBgn0035711.2;Dir=sensecoverage=100.0;identity=99.2;matches=640;mismatches=5;indels=0;unknowns=0;locus=RLOC_00005556
Chr1	stalkie_big_nohaplotig	exon	9027185	9027296	100	+	.	Parent=FBgn0035711.2.mrna1;Target=FBgn0035711.2 1 112 +
Chr1	stalkie_big_nohaplotig	exon	9032508	9032564	98	+	.	Parent=FBgn0035711.2.mrna1;Target=FBgn0035711.2 113 169 +
Chr1	stalkie_big_nohaplotig	exon	9034908	9034981	98	+	.	Parent=FBgn0035711.2.mrna1;Target=FBgn0035711.2 170 243 +
Chr1	stalkie_big_nohaplotig	exon	9035315	9035716	99	+	.	Parent=FBgn0035711.2.mrna1;Target=FBgn0035711.2 244 645 +
Chr1	stalkie_big_nohaplotig	CDS	9027185	9027296	.	+	0	Parent=FBgn0035711.2.mrna1;Target=FBgn0035711.2 1 112 +
Chr1	stalkie_big_nohaplotig	CDS	9032508	9032564	.	+	2	Parent=FBgn0035711.2.mrna1;Target=FBgn0035711.2 113 169 +
Chr1	stalkie_big_nohaplotig	CDS	9034908	9034981	.	+	2	Parent=FBgn0035711.2.mrna1;Target=FBgn0035711.2 170 243 +
Chr1	stalkie_big_nohaplotig	CDS	9035315	9035716	.	+	0	Parent=FBgn0035711.2.mrna1;Target=FBgn0035711.2 244 645 +
Chr1	stalkie_big_nohaplotig	mRNA	9034959	9035338	.	-	.	ID=comp2193621_c0_seq1.mrna1;geneID=comp2193621_c0_seq1.path1;Name=comp2193621_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=379;mismatches=1;indels=0;unknowns=0;Target=comp2193621_c0_seq1 380 1 .;CDS_Target=comp2193621_c0_seq1 380 150 .;locus=RLOC_00005556
Chr1	stalkie_big_nohaplotig	exon	9034959	9035338	99	-	.	Parent=comp2193621_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9034959	9035189	.	-	0	Parent=comp2193621_c0_seq1.mrna1
Chr1	gffcl	locus	9042598	9043432	.	-	.	ID=RLOC_00005557;geneIDs=comp159912_c0_seq1.path1;transcripts=comp159912_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9042598	9043432	.	-	.	ID=comp159912_c0_seq1.mrna1;geneID=comp159912_c0_seq1.path1;Name=comp159912_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.3;matches=823;mismatches=7;indels=7;unknowns=0;Target=comp159912_c0_seq1 833 2 .;CDS_Target=comp159912_c0_seq1 598 521 .;locus=RLOC_00005557
Chr1	stalkie_big_nohaplotig	exon	9042598	9043432	98	-	.	Parent=comp159912_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9042836	9042913	.	-	0	Parent=comp159912_c0_seq1.mrna1
Chr1	gffcl	locus	9046835	9047320	.	+	.	ID=RLOC_00005558;geneIDs=comp137944_c0_seq1.path1;transcripts=comp137944_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9046835	9047320	.	+	.	ID=comp137944_c0_seq1.mrna1;geneID=comp137944_c0_seq1.path1;Name=comp137944_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.1;matches=443;mismatches=29;indels=9;unknowns=0;Target=comp137944_c0_seq1 417 277 .;locus=RLOC_00005558
Chr1	stalkie_big_nohaplotig	exon	9046835	9047052	89	+	.	Parent=comp137944_c0_seq1.mrna1;Target=comp137944_c0_seq1 225 1 .
Chr1	stalkie_big_nohaplotig	exon	9047066	9047320	94	+	.	Parent=comp137944_c0_seq1.mrna1;Target=comp137944_c0_seq1 480 226 .
Chr1	stalkie_big_nohaplotig	CDS	9047117	9047257	.	+	0	Parent=comp137944_c0_seq1.mrna1
Chr1	gffcl	locus	9050171	9051209	.	-	.	ID=RLOC_00005559;geneIDs=comp151818_c0_seq1.path1;transcripts=comp151818_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9050171	9051209	.	-	.	ID=comp151818_c0_seq1.mrna1;geneID=comp151818_c0_seq1.path1;Name=comp151818_c0_seq1;Dir=sensecoverage=97.6;identity=94.8;matches=919;mismatches=45;indels=5;unknowns=0;Target=comp151818_c0_seq1 25 99 +;locus=RLOC_00005559
Chr1	stalkie_big_nohaplotig	exon	9050171	9050318	97	-	.	Parent=comp151818_c0_seq1.mrna1;Target=comp151818_c0_seq1 845 992 +
Chr1	stalkie_big_nohaplotig	exon	9050394	9051209	94	-	.	Parent=comp151818_c0_seq1.mrna1;Target=comp151818_c0_seq1 24 844 +
Chr1	stalkie_big_nohaplotig	CDS	9051134	9051208	.	-	0	Parent=comp151818_c0_seq1.mrna1
Chr1	gffcl	locus	9058688	9067701	.	-	.	ID=RLOC_00005560;geneIDs=FBgn0005626.1.path1,comp150932_c0_seq1.path1,comp157491_c0_seq1.path1,comp159248_c0_seq1.path2;transcripts=FBgn0005626.1.mrna1,comp159248_c0_seq1.mrna2,comp157491_c0_seq1.mrna1,comp150932_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9058688	9067701	.	-	.	ID=FBgn0005626.1.mrna1;geneID=FBgn0005626.1.path1;Name=FBgn0005626.1;Dir=sensecoverage=100.0;identity=99.8;matches=1799;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005560
Chr1	stalkie_big_nohaplotig	exon	9058688	9059083	99	-	.	Parent=FBgn0005626.1.mrna1;Target=FBgn0005626.1 1408 1803 +
Chr1	stalkie_big_nohaplotig	exon	9060265	9060391	100	-	.	Parent=FBgn0005626.1.mrna1;Target=FBgn0005626.1 1281 1407 +
Chr1	stalkie_big_nohaplotig	exon	9061694	9062513	99	-	.	Parent=FBgn0005626.1.mrna1;Target=FBgn0005626.1 461 1280 +
Chr1	stalkie_big_nohaplotig	exon	9063216	9063302	100	-	.	Parent=FBgn0005626.1.mrna1;Target=FBgn0005626.1 374 460 +
Chr1	stalkie_big_nohaplotig	exon	9063467	9063604	100	-	.	Parent=FBgn0005626.1.mrna1;Target=FBgn0005626.1 236 373 +
Chr1	stalkie_big_nohaplotig	exon	9063794	9063905	100	-	.	Parent=FBgn0005626.1.mrna1;Target=FBgn0005626.1 124 235 +
Chr1	stalkie_big_nohaplotig	exon	9067579	9067701	100	-	.	Parent=FBgn0005626.1.mrna1;Target=FBgn0005626.1 1 123 +
Chr1	stalkie_big_nohaplotig	CDS	9058688	9059083	.	-	0	Parent=FBgn0005626.1.mrna1;Target=FBgn0005626.1 1408 1803 +
Chr1	stalkie_big_nohaplotig	CDS	9060265	9060391	.	-	1	Parent=FBgn0005626.1.mrna1;Target=FBgn0005626.1 1281 1407 +
Chr1	stalkie_big_nohaplotig	CDS	9061694	9062513	.	-	2	Parent=FBgn0005626.1.mrna1;Target=FBgn0005626.1 461 1280 +
Chr1	stalkie_big_nohaplotig	CDS	9063216	9063302	.	-	2	Parent=FBgn0005626.1.mrna1;Target=FBgn0005626.1 374 460 +
Chr1	stalkie_big_nohaplotig	CDS	9063467	9063604	.	-	2	Parent=FBgn0005626.1.mrna1;Target=FBgn0005626.1 236 373 +
Chr1	stalkie_big_nohaplotig	CDS	9063794	9063905	.	-	0	Parent=FBgn0005626.1.mrna1;Target=FBgn0005626.1 124 235 +
Chr1	stalkie_big_nohaplotig	CDS	9067579	9067701	.	-	0	Parent=FBgn0005626.1.mrna1;Target=FBgn0005626.1 1 123 +
Chr1	stalkie_big_nohaplotig	mRNA	9059061	9060202	.	-	.	ID=comp159248_c0_seq1.mrna2;geneID=comp159248_c0_seq1.path2;Name=comp159248_c0_seq1;Dir=indeterminatecoverage=80.2;identity=99.7;matches=1139;mismatches=3;indels=1;unknowns=0;Target=comp159248_c0_seq1 1425 283 .;CDS_Target=comp159248_c0_seq1 346 283 .;locus=RLOC_00005560
Chr1	stalkie_big_nohaplotig	exon	9059061	9060202	99	-	.	Parent=comp159248_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	9060139	9060202	.	-	2	Parent=comp159248_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	9060369	9061244	.	-	.	ID=comp157491_c0_seq1.mrna1;geneID=comp157491_c0_seq1.path1;Name=comp157491_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=864;mismatches=5;indels=14;unknowns=0;Target=comp157491_c0_seq1 876 1 .;CDS_Target=comp157491_c0_seq1 511 401 .;locus=RLOC_00005560
Chr1	stalkie_big_nohaplotig	exon	9060369	9061244	97	-	.	Parent=comp157491_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9060734	9060844	.	-	0	Parent=comp157491_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9062492	9063239	.	-	.	ID=comp150932_c0_seq1.mrna1;geneID=comp150932_c0_seq1.path1;Name=comp150932_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=740;mismatches=8;indels=0;unknowns=0;Target=comp150932_c0_seq1 748 1 .;CDS_Target=comp150932_c0_seq1 361 206 .;locus=RLOC_00005560
Chr1	stalkie_big_nohaplotig	exon	9062492	9063239	98	-	.	Parent=comp150932_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9062879	9063034	.	-	0	Parent=comp150932_c0_seq1.mrna1
Chr1	gffcl	locus	9113317	9113750	.	-	.	ID=RLOC_00005561;geneIDs=comp137315_c0_seq1.path1;transcripts=comp137315_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9113317	9113750	.	-	.	ID=comp137315_c0_seq1.mrna1;geneID=comp137315_c0_seq1.path1;Name=comp137315_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=369;mismatches=1;indels=6;unknowns=0;Target=comp137315_c0_seq1 36 1 .;locus=RLOC_00005561
Chr1	stalkie_big_nohaplotig	exon	9113317	9113419	94	-	.	Parent=comp137315_c0_seq1.mrna1;Target=comp137315_c0_seq1 376 268 .
Chr1	stalkie_big_nohaplotig	exon	9113484	9113750	99	-	.	Parent=comp137315_c0_seq1.mrna1;Target=comp137315_c0_seq1 267 1 .
Chr1	stalkie_big_nohaplotig	CDS	9113715	9113750	.	-	0	Parent=comp137315_c0_seq1.mrna1
Chr1	gffcl	locus	9115892	9117377	.	+	.	ID=RLOC_00005562;geneIDs=comp159012_c0_seq1.path1;transcripts=comp159012_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9115892	9117377	.	+	.	ID=comp159012_c0_seq1.mrna1;geneID=comp159012_c0_seq1.path1;Name=comp159012_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.2;matches=1475;mismatches=11;indels=1;unknowns=0;Target=comp159012_c0_seq1 1502 16 .;CDS_Target=comp159012_c0_seq1 1049 738 .;locus=RLOC_00005562
Chr1	stalkie_big_nohaplotig	exon	9115892	9117377	99	+	.	Parent=comp159012_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9116614	9116925	.	+	0	Parent=comp159012_c0_seq1.mrna1
Chr1	gffcl	locus	9117948	11079343	.	.	.	ID=RLOC_00005563;geneIDs=FBgn0029813.1.path1,FBgn0052409.1.path1,comp118630_c0_seq1.path1,comp156437_c0_seq1.path1,comp161496_c0_seq1.path1,comp162741_c4_seq1.path1;transcripts=comp161496_c0_seq1.mrna1,comp162741_c4_seq1.mrna1,FBgn0052409.1.mrna1,FBgn0029813.1.mrna1,comp156437_c0_seq1.mrna1,comp118630_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9117948	11079343	.	-	.	ID=comp161496_c0_seq1.mrna1;geneID=comp161496_c0_seq1.path1;Name=comp161496_c0_seq1;Dir=antisensecoverage=65.7;identity=93.1;matches=4372;mismatches=151;indels=171;unknowns=0;locus=RLOC_00005563
Chr1	stalkie_big_nohaplotig	exon	9117948	9118260	99	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 2652 2963 -
Chr1	stalkie_big_nohaplotig	exon	9118336	9121800	99	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 2964 6428 -
Chr1	stalkie_big_nohaplotig	exon	9129880	9129882	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 6429 6431 -
Chr1	stalkie_big_nohaplotig	exon	9135119	9135131	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 6432 6444 -
Chr1	stalkie_big_nohaplotig	exon	9570922	9570930	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 7500 7508 -
Chr1	stalkie_big_nohaplotig	exon	9576622	9576655	35	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 7515 7541 -
Chr1	stalkie_big_nohaplotig	exon	9589129	9589137	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 7542 7550 -
Chr1	stalkie_big_nohaplotig	exon	10540697	10540703	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 7551 7557 -
Chr1	stalkie_big_nohaplotig	exon	10541800	10541802	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 7589 7591 -
Chr1	stalkie_big_nohaplotig	exon	10544273	10544278	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 7592 7597 -
Chr1	stalkie_big_nohaplotig	exon	10545402	10545411	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 7598 7607 -
Chr1	stalkie_big_nohaplotig	exon	10646296	10646301	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 7609 7614 -
Chr1	stalkie_big_nohaplotig	exon	10653098	10653103	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 7615 7620 -
Chr1	stalkie_big_nohaplotig	exon	10653852	10653855	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 7621 7624 -
Chr1	stalkie_big_nohaplotig	exon	10654068	10654109	80	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 7625 7666 -
Chr1	stalkie_big_nohaplotig	exon	10677290	10677291	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 7667 7668 -
Chr1	stalkie_big_nohaplotig	exon	10681271	10681275	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 7669 7673 -
Chr1	stalkie_big_nohaplotig	exon	10682690	10682698	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 7674 7682 -
Chr1	stalkie_big_nohaplotig	exon	10697182	10697203	34	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 7735 7784 -
Chr1	stalkie_big_nohaplotig	exon	10703436	10703444	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 7789 7797 -
Chr1	stalkie_big_nohaplotig	exon	10714901	10714913	84	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 7827 7839 -
Chr1	stalkie_big_nohaplotig	exon	10724888	10724895	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 7857 7864 -
Chr1	stalkie_big_nohaplotig	exon	10724905	10724914	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 7915 7924 -
Chr1	stalkie_big_nohaplotig	exon	10754307	10754314	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 8044 8051 -
Chr1	stalkie_big_nohaplotig	exon	10755961	10755972	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 8059 8070 -
Chr1	stalkie_big_nohaplotig	exon	10759638	10759646	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 8083 8091 -
Chr1	stalkie_big_nohaplotig	exon	10761740	10761749	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 8092 8101 -
Chr1	stalkie_big_nohaplotig	exon	10762154	10762155	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 8439 8440 -
Chr1	stalkie_big_nohaplotig	exon	10763205	10763223	89	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 8469 8487 -
Chr1	stalkie_big_nohaplotig	exon	10777154	10777204	50	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 8554 8599 -
Chr1	stalkie_big_nohaplotig	exon	10777427	10777478	49	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 8600 8650 -
Chr1	stalkie_big_nohaplotig	exon	10778419	10778427	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 9131 9139 -
Chr1	stalkie_big_nohaplotig	exon	10779362	10779371	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 9306 9315 -
Chr1	stalkie_big_nohaplotig	exon	10780361	10780400	60	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 9398 9436 -
Chr1	stalkie_big_nohaplotig	exon	10786987	10787005	31	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 9451 9498 -
Chr1	stalkie_big_nohaplotig	exon	10793812	10793819	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 9499 9506 -
Chr1	stalkie_big_nohaplotig	exon	10804228	10804237	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 9507 9516 -
Chr1	stalkie_big_nohaplotig	exon	10804243	10804254	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 9528 9539 -
Chr1	stalkie_big_nohaplotig	exon	10902497	10902503	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 9547 9553 -
Chr1	stalkie_big_nohaplotig	exon	10912298	10912314	82	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 9559 9573 -
Chr1	stalkie_big_nohaplotig	exon	10919895	10919903	88	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 9574 9582 -
Chr1	stalkie_big_nohaplotig	exon	10927358	10927361	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 9583 9586 -
Chr1	stalkie_big_nohaplotig	exon	10937578	10937660	43	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 9587 9695 -
Chr1	stalkie_big_nohaplotig	exon	10938087	10938099	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 9696 9708 -
Chr1	stalkie_big_nohaplotig	exon	10975999	10976000	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 9788 9789 -
Chr1	stalkie_big_nohaplotig	exon	11019123	11019126	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 9794 9797 -
Chr1	stalkie_big_nohaplotig	exon	11027138	11027153	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 9798 9813 -
Chr1	stalkie_big_nohaplotig	exon	11042973	11042987	42	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 9814 9841 -
Chr1	stalkie_big_nohaplotig	exon	11049006	11049013	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 9842 9849 -
Chr1	stalkie_big_nohaplotig	exon	11059943	11059949	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 9850 9856 -
Chr1	stalkie_big_nohaplotig	exon	11071849	11071851	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 9857 9859 -
Chr1	stalkie_big_nohaplotig	exon	11074932	11074982	41	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 9860 9958 -
Chr1	stalkie_big_nohaplotig	exon	11074984	11074985	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 10245 10246 -
Chr1	stalkie_big_nohaplotig	exon	11079332	11079343	100	-	.	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 10247 10258 -
Chr1	stalkie_big_nohaplotig	CDS	9117949	9118260	.	-	2	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 2653 2963 .
Chr1	stalkie_big_nohaplotig	CDS	9118336	9121225	.	-	0	Parent=comp161496_c0_seq1.mrna1;Target=comp161496_c0_seq1 2964 5853 .
Chr1	stalkie_big_nohaplotig	mRNA	9122945	9138993	.	-	.	ID=comp162741_c4_seq1.mrna1;geneID=comp162741_c4_seq1.path1;Name=comp162741_c4_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=2724;mismatches=15;indels=0;unknowns=0;locus=RLOC_00005563
Chr1	stalkie_big_nohaplotig	exon	9122945	9123402	100	-	.	Parent=comp162741_c4_seq1.mrna1;Target=comp162741_c4_seq1 2282 2739 +
Chr1	stalkie_big_nohaplotig	exon	9124761	9124885	98	-	.	Parent=comp162741_c4_seq1.mrna1;Target=comp162741_c4_seq1 2157 2281 +
Chr1	stalkie_big_nohaplotig	exon	9125934	9126071	100	-	.	Parent=comp162741_c4_seq1.mrna1;Target=comp162741_c4_seq1 2019 2156 +
Chr1	stalkie_big_nohaplotig	exon	9129194	9130354	99	-	.	Parent=comp162741_c4_seq1.mrna1;Target=comp162741_c4_seq1 858 2018 +
Chr1	stalkie_big_nohaplotig	exon	9131563	9131724	100	-	.	Parent=comp162741_c4_seq1.mrna1;Target=comp162741_c4_seq1 696 857 +
Chr1	stalkie_big_nohaplotig	exon	9138226	9138830	99	-	.	Parent=comp162741_c4_seq1.mrna1;Target=comp162741_c4_seq1 91 695 +
Chr1	stalkie_big_nohaplotig	exon	9138904	9138993	98	-	.	Parent=comp162741_c4_seq1.mrna1;Target=comp162741_c4_seq1 1 90 +
Chr1	stalkie_big_nohaplotig	CDS	9122945	9123402	.	-	2	Parent=comp162741_c4_seq1.mrna1;Target=comp162741_c4_seq1 2282 2739 +
Chr1	stalkie_big_nohaplotig	CDS	9124761	9124885	.	-	1	Parent=comp162741_c4_seq1.mrna1;Target=comp162741_c4_seq1 2157 2281 +
Chr1	stalkie_big_nohaplotig	CDS	9125934	9126071	.	-	1	Parent=comp162741_c4_seq1.mrna1;Target=comp162741_c4_seq1 2019 2156 +
Chr1	stalkie_big_nohaplotig	CDS	9129194	9130354	.	-	1	Parent=comp162741_c4_seq1.mrna1;Target=comp162741_c4_seq1 858 2018 +
Chr1	stalkie_big_nohaplotig	CDS	9131563	9131724	.	-	1	Parent=comp162741_c4_seq1.mrna1;Target=comp162741_c4_seq1 696 857 +
Chr1	stalkie_big_nohaplotig	CDS	9138226	9138830	.	-	0	Parent=comp162741_c4_seq1.mrna1;Target=comp162741_c4_seq1 91 695 +
Chr1	stalkie_big_nohaplotig	CDS	9138904	9138993	.	-	0	Parent=comp162741_c4_seq1.mrna1;Target=comp162741_c4_seq1 1 90 +
Chr1	stalkie_big_nohaplotig	mRNA	10543862	10546263	.	-	.	ID=FBgn0052409.1.mrna1;geneID=FBgn0052409.1.path1;Name=FBgn0052409.1;Dir=sensecoverage=98.8;identity=99.5;matches=967;mismatches=5;indels=0;unknowns=0;locus=RLOC_00005563
Chr1	stalkie_big_nohaplotig	exon	10543862	10543898	100	-	.	Parent=FBgn0052409.1.mrna1;Target=FBgn0052409.1 936 972 +
Chr1	stalkie_big_nohaplotig	exon	10545207	10545700	99	-	.	Parent=FBgn0052409.1.mrna1;Target=FBgn0052409.1 442 935 +
Chr1	stalkie_big_nohaplotig	exon	10545761	10546013	99	-	.	Parent=FBgn0052409.1.mrna1;Target=FBgn0052409.1 189 441 +
Chr1	stalkie_big_nohaplotig	exon	10546076	10546263	99	-	.	Parent=FBgn0052409.1.mrna1;Target=FBgn0052409.1 1 188 +
Chr1	stalkie_big_nohaplotig	CDS	10543862	10543898	.	-	1	Parent=FBgn0052409.1.mrna1;Target=FBgn0052409.1 936 972 +
Chr1	stalkie_big_nohaplotig	CDS	10545207	10545700	.	-	0	Parent=FBgn0052409.1.mrna1;Target=FBgn0052409.1 442 935 +
Chr1	stalkie_big_nohaplotig	CDS	10545761	10546013	.	-	1	Parent=FBgn0052409.1.mrna1;Target=FBgn0052409.1 189 441 +
Chr1	stalkie_big_nohaplotig	CDS	10546076	10546263	.	-	0	Parent=FBgn0052409.1.mrna1;Target=FBgn0052409.1 1 188 +
Chr1	stalkie_big_nohaplotig	mRNA	10682664	10683410	.	+	.	ID=FBgn0029813.1.mrna1;geneID=FBgn0029813.1.path1;Name=FBgn0029813.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=742;mismatches=5;indels=0;unknowns=0;Target=FBgn0029813.1 747 1 .;locus=RLOC_00005563
Chr1	stalkie_big_nohaplotig	exon	10682664	10683410	99	+	.	Parent=FBgn0029813.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	10682664	10683410	.	+	0	Parent=FBgn0029813.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11041951	11043042	.	+	.	ID=comp156437_c0_seq1.mrna1;geneID=comp156437_c0_seq1.path1;Name=comp156437_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.0;matches=1064;mismatches=17;indels=16;unknowns=0;Target=comp156437_c0_seq1 1086 1 .;CDS_Target=comp156437_c0_seq1 513 403 .;locus=RLOC_00005563
Chr1	stalkie_big_nohaplotig	exon	11041951	11043042	96	+	.	Parent=comp156437_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11042348	11042458	.	+	0	Parent=comp156437_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11059685	11060080	.	-	.	ID=comp118630_c0_seq1.mrna1;geneID=comp118630_c0_seq1.path1;Name=comp118630_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=395;mismatches=1;indels=0;unknowns=0;Target=comp118630_c0_seq1 396 1 .;CDS_Target=comp118630_c0_seq1 395 297 .;locus=RLOC_00005563
Chr1	stalkie_big_nohaplotig	exon	11059685	11060080	99	-	.	Parent=comp118630_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11059686	11059784	.	-	0	Parent=comp118630_c0_seq1.mrna1
Chr1	gffcl	locus	9126166	9126507	.	+	.	ID=RLOC_00005564;geneIDs=comp143130_c1_seq1.path1;transcripts=comp143130_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9126166	9126507	.	+	.	ID=comp143130_c1_seq1.mrna1;geneID=comp143130_c1_seq1.path1;Name=comp143130_c1_seq1;Dir=indeterminatecoverage=98.3;identity=99.1;matches=342;mismatches=0;indels=3;unknowns=0;Target=comp143130_c1_seq1 345 1 .;CDS_Target=comp143130_c1_seq1 325 236 .;locus=RLOC_00005564
Chr1	stalkie_big_nohaplotig	exon	9126166	9126507	99	+	.	Parent=comp143130_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9126398	9126487	.	+	0	Parent=comp143130_c1_seq1.mrna1
Chr1	gffcl	locus	9217539	9217945	.	+	.	ID=RLOC_00005566;geneIDs=comp116061_c0_seq1.path1;transcripts=comp116061_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9217539	9217945	.	+	.	ID=comp116061_c0_seq1.mrna1;geneID=comp116061_c0_seq1.path1;Name=comp116061_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=405;mismatches=1;indels=1;unknowns=0;Target=comp116061_c0_seq1 406 1 .;CDS_Target=comp116061_c0_seq1 266 141 .;locus=RLOC_00005566
Chr1	stalkie_big_nohaplotig	exon	9217539	9217945	99	+	.	Parent=comp116061_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9217679	9217804	.	+	0	Parent=comp116061_c0_seq1.mrna1
Chr1	gffcl	locus	9217963	9218891	.	.	.	ID=RLOC_00005567;geneIDs=Dv_FBgn0200225.path1,comp161178_c1_seq1.path2;transcripts=comp161178_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	9217963	9218891	.	+	.	ID=comp161178_c1_seq1.mrna2;geneID=comp161178_c1_seq1.path2;Name=comp161178_c1_seq1;Dir=indeterminatecoverage=40.1;identity=98.0;matches=911;mismatches=8;indels=11;unknowns=0;Target=comp161178_c1_seq1 2292 1373 .;CDS_Target=comp161178_c1_seq1 2037 1921 .;locus=RLOC_00005567
Chr1	stalkie_big_nohaplotig	exon	9217963	9218891	97	+	.	Parent=comp161178_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	9218520	9218636	.	+	0	Parent=comp161178_c1_seq1.mrna2
Chr1	gffcl	locus	9225892	9228335	.	-	.	ID=RLOC_00005568;geneIDs=comp163136_c1_seq1.path1;transcripts=comp163136_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9225892	9228335	.	-	.	ID=comp163136_c1_seq1.mrna1;geneID=comp163136_c1_seq1.path1;Name=comp163136_c1_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=1975;mismatches=12;indels=0;unknowns=0;locus=RLOC_00005568
Chr1	stalkie_big_nohaplotig	exon	9225892	9226459	99	-	.	Parent=comp163136_c1_seq1.mrna1;Target=comp163136_c1_seq1 1 568 -
Chr1	stalkie_big_nohaplotig	exon	9226527	9226737	99	-	.	Parent=comp163136_c1_seq1.mrna1;Target=comp163136_c1_seq1 569 779 -
Chr1	stalkie_big_nohaplotig	exon	9227065	9228141	99	-	.	Parent=comp163136_c1_seq1.mrna1;Target=comp163136_c1_seq1 780 1856 -
Chr1	stalkie_big_nohaplotig	exon	9228205	9228335	100	-	.	Parent=comp163136_c1_seq1.mrna1;Target=comp163136_c1_seq1 1857 1987 -
Chr1	stalkie_big_nohaplotig	CDS	9225894	9226459	.	-	2	Parent=comp163136_c1_seq1.mrna1;Target=comp163136_c1_seq1 3 568 .
Chr1	stalkie_big_nohaplotig	CDS	9226527	9226737	.	-	0	Parent=comp163136_c1_seq1.mrna1;Target=comp163136_c1_seq1 569 779 .
Chr1	stalkie_big_nohaplotig	CDS	9227065	9228141	.	-	0	Parent=comp163136_c1_seq1.mrna1;Target=comp163136_c1_seq1 780 1856 .
Chr1	stalkie_big_nohaplotig	CDS	9228205	9228333	.	-	0	Parent=comp163136_c1_seq1.mrna1;Target=comp163136_c1_seq1 1857 1985 .
Chr1	gffcl	locus	9232081	9234071	.	+	.	ID=RLOC_00005569;geneIDs=comp160011_c0_seq1.path1;transcripts=comp160011_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9232081	9234071	.	+	.	ID=comp160011_c0_seq1.mrna1;geneID=comp160011_c0_seq1.path1;Name=comp160011_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=1947;mismatches=43;indels=8;unknowns=0;Target=comp160011_c0_seq1 1997 1 .;CDS_Target=comp160011_c0_seq1 438 298 .;locus=RLOC_00005569
Chr1	stalkie_big_nohaplotig	exon	9232081	9234071	97	+	.	Parent=comp160011_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9232375	9232515	.	+	0	Parent=comp160011_c0_seq1.mrna1
Chr1	gffcl	locus	9247211	9256603	.	-	.	ID=RLOC_00005570;geneIDs=FBgn0261547.1.path1;transcripts=FBgn0261547.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9247211	9256603	.	-	.	ID=FBgn0261547.1.mrna1;geneID=FBgn0261547.1.path1;Name=FBgn0261547.1;Dir=sensecoverage=100.0;identity=99.5;matches=3857;mismatches=19;indels=0;unknowns=0;locus=RLOC_00005570
Chr1	stalkie_big_nohaplotig	exon	9247211	9247232	100	-	.	Parent=FBgn0261547.1.mrna1;Target=FBgn0261547.1 3855 3876 +
Chr1	stalkie_big_nohaplotig	exon	9252750	9256603	99	-	.	Parent=FBgn0261547.1.mrna1;Target=FBgn0261547.1 1 3854 +
Chr1	stalkie_big_nohaplotig	CDS	9247211	9247232	.	-	1	Parent=FBgn0261547.1.mrna1;Target=FBgn0261547.1 3855 3876 +
Chr1	stalkie_big_nohaplotig	CDS	9252750	9256603	.	-	0	Parent=FBgn0261547.1.mrna1;Target=FBgn0261547.1 1 3854 +
Chr1	gffcl	locus	9304367	9305265	.	-	.	ID=RLOC_00005571;geneIDs=comp142187_c0_seq1.path1;transcripts=comp142187_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9304367	9305265	.	-	.	ID=comp142187_c0_seq1.mrna1;geneID=comp142187_c0_seq1.path1;Name=comp142187_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=895;mismatches=4;indels=0;unknowns=0;Target=comp142187_c0_seq1 899 1 .;CDS_Target=comp142187_c0_seq1 127 2 .;locus=RLOC_00005571
Chr1	stalkie_big_nohaplotig	exon	9304367	9305265	99	-	.	Parent=comp142187_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9305139	9305264	.	-	0	Parent=comp142187_c0_seq1.mrna1
Chr1	gffcl	locus	9312217	9314415	.	+	.	ID=RLOC_00005572;geneIDs=FBgn0035741.1.path1;transcripts=FBgn0035741.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9312217	9314415	.	+	.	ID=FBgn0035741.1.mrna1;geneID=FBgn0035741.1.path1;Name=FBgn0035741.1;Dir=sensecoverage=100.0;identity=98.8;matches=1772;mismatches=22;indels=0;unknowns=0;locus=RLOC_00005572
Chr1	stalkie_big_nohaplotig	exon	9312217	9312487	99	+	.	Parent=FBgn0035741.1.mrna1;Target=FBgn0035741.1 1 271 +
Chr1	stalkie_big_nohaplotig	exon	9312610	9312845	99	+	.	Parent=FBgn0035741.1.mrna1;Target=FBgn0035741.1 272 507 +
Chr1	stalkie_big_nohaplotig	exon	9312921	9313740	98	+	.	Parent=FBgn0035741.1.mrna1;Target=FBgn0035741.1 508 1327 +
Chr1	stalkie_big_nohaplotig	exon	9313893	9314164	99	+	.	Parent=FBgn0035741.1.mrna1;Target=FBgn0035741.1 1328 1599 +
Chr1	stalkie_big_nohaplotig	exon	9314221	9314415	97	+	.	Parent=FBgn0035741.1.mrna1;Target=FBgn0035741.1 1600 1794 +
Chr1	stalkie_big_nohaplotig	CDS	9312217	9312487	.	+	0	Parent=FBgn0035741.1.mrna1;Target=FBgn0035741.1 1 271 +
Chr1	stalkie_big_nohaplotig	CDS	9312610	9312845	.	+	2	Parent=FBgn0035741.1.mrna1;Target=FBgn0035741.1 272 507 +
Chr1	stalkie_big_nohaplotig	CDS	9312921	9313740	.	+	0	Parent=FBgn0035741.1.mrna1;Target=FBgn0035741.1 508 1327 +
Chr1	stalkie_big_nohaplotig	CDS	9313893	9314164	.	+	2	Parent=FBgn0035741.1.mrna1;Target=FBgn0035741.1 1328 1599 +
Chr1	stalkie_big_nohaplotig	CDS	9314221	9314415	.	+	0	Parent=FBgn0035741.1.mrna1;Target=FBgn0035741.1 1600 1794 +
Chr1	gffcl	locus	9314605	9314883	.	-	.	ID=RLOC_00005573;geneIDs=FBgn0035742.1.path1;transcripts=FBgn0035742.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9314605	9314883	.	-	.	ID=FBgn0035742.1.mrna1;geneID=FBgn0035742.1.path1;Name=FBgn0035742.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=279;mismatches=0;indels=0;unknowns=0;Target=FBgn0035742.1 279 1 .;locus=RLOC_00005573
Chr1	stalkie_big_nohaplotig	exon	9314605	9314883	100	-	.	Parent=FBgn0035742.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9314605	9314883	.	-	0	Parent=FBgn0035742.1.mrna1
Chr1	gffcl	locus	9317635	9323820	.	-	.	ID=RLOC_00005574;geneIDs=comp154957_c0_seq1.path1;transcripts=comp154957_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9317635	9323820	.	-	.	ID=comp154957_c0_seq1.mrna1;geneID=comp154957_c0_seq1.path1;Name=comp154957_c0_seq1;Dir=antisensecoverage=100.0;identity=97.9;matches=1119;mismatches=9;indels=15;unknowns=0;Target=comp154957_c0_seq1 3 188 .;locus=RLOC_00005574
Chr1	stalkie_big_nohaplotig	exon	9317635	9318533	98	-	.	Parent=comp154957_c0_seq1.mrna1;Target=comp154957_c0_seq1 1 914 -
Chr1	stalkie_big_nohaplotig	exon	9323592	9323820	97	-	.	Parent=comp154957_c0_seq1.mrna1;Target=comp154957_c0_seq1 915 1143 -
Chr1	stalkie_big_nohaplotig	CDS	9317637	9317807	.	-	0	Parent=comp154957_c0_seq1.mrna1
Chr1	gffcl	locus	9318879	9319318	.	+	.	ID=RLOC_00005575;geneIDs=FBgn0035743.1.path1;transcripts=FBgn0035743.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9318879	9319318	.	+	.	ID=FBgn0035743.1.mrna1;geneID=FBgn0035743.1.path1;Name=FBgn0035743.1;Dir=sensecoverage=100.0;identity=100.0;matches=351;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005575
Chr1	stalkie_big_nohaplotig	exon	9318879	9318989	100	+	.	Parent=FBgn0035743.1.mrna1;Target=FBgn0035743.1 1 111 +
Chr1	stalkie_big_nohaplotig	exon	9319079	9319318	100	+	.	Parent=FBgn0035743.1.mrna1;Target=FBgn0035743.1 112 351 +
Chr1	stalkie_big_nohaplotig	CDS	9318879	9318989	.	+	0	Parent=FBgn0035743.1.mrna1;Target=FBgn0035743.1 1 111 +
Chr1	stalkie_big_nohaplotig	CDS	9319079	9319318	.	+	0	Parent=FBgn0035743.1.mrna1;Target=FBgn0035743.1 112 351 +
Chr1	gffcl	locus	9335091	9335450	.	+	.	ID=RLOC_00005576;geneIDs=FBgn0010387.1.path1;transcripts=FBgn0010387.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9335091	9335450	.	+	.	ID=FBgn0010387.1.mrna1;geneID=FBgn0010387.1.path1;Name=FBgn0010387.1;Dir=sensecoverage=100.0;identity=100.0;matches=276;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005576
Chr1	stalkie_big_nohaplotig	exon	9335091	9335120	100	+	.	Parent=FBgn0010387.1.mrna1;Target=FBgn0010387.1 1 30 +
Chr1	stalkie_big_nohaplotig	exon	9335205	9335450	100	+	.	Parent=FBgn0010387.1.mrna1;Target=FBgn0010387.1 31 276 +
Chr1	stalkie_big_nohaplotig	CDS	9335091	9335120	.	+	0	Parent=FBgn0010387.1.mrna1;Target=FBgn0010387.1 1 30 +
Chr1	stalkie_big_nohaplotig	CDS	9335205	9335450	.	+	0	Parent=FBgn0010387.1.mrna1;Target=FBgn0010387.1 31 276 +
Chr1	gffcl	locus	9345750	9348368	.	+	.	ID=RLOC_00005577;geneIDs=comp147354_c2_seq1.path1;transcripts=comp147354_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9345750	9348368	.	+	.	ID=comp147354_c2_seq1.mrna1;geneID=comp147354_c2_seq1.path1;Name=comp147354_c2_seq1;Dir=indeterminatecoverage=99.9;identity=92.3;matches=1056;mismatches=46;indels=42;unknowns=0;Target=comp147354_c2_seq1 1127 885 .;locus=RLOC_00005577
Chr1	stalkie_big_nohaplotig	exon	9345750	9346307	87	+	.	Parent=comp147354_c2_seq1.mrna1;Target=comp147354_c2_seq1 567 2 .
Chr1	stalkie_big_nohaplotig	exon	9346610	9346615	100	+	.	Parent=comp147354_c2_seq1.mrna1;Target=comp147354_c2_seq1 573 568 .
Chr1	stalkie_big_nohaplotig	exon	9347815	9348368	97	+	.	Parent=comp147354_c2_seq1.mrna1;Target=comp147354_c2_seq1 1129 574 .
Chr1	stalkie_big_nohaplotig	CDS	9348131	9348366	.	+	0	Parent=comp147354_c2_seq1.mrna1
Chr1	gffcl	locus	9354351	9362146	.	+	.	ID=RLOC_00005578;geneIDs=FBgn0023001.1.path1;transcripts=FBgn0023001.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9354351	9362146	.	+	.	ID=FBgn0023001.1.mrna1;geneID=FBgn0023001.1.path1;Name=FBgn0023001.1;Dir=sensecoverage=100.0;identity=99.5;matches=3254;mismatches=16;indels=0;unknowns=0;locus=RLOC_00005578
Chr1	stalkie_big_nohaplotig	exon	9354351	9354512	98	+	.	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 1 162 +
Chr1	stalkie_big_nohaplotig	exon	9356762	9357013	100	+	.	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 163 414 +
Chr1	stalkie_big_nohaplotig	exon	9357099	9357273	99	+	.	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 415 589 +
Chr1	stalkie_big_nohaplotig	exon	9357332	9357495	99	+	.	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 590 753 +
Chr1	stalkie_big_nohaplotig	exon	9357551	9357760	99	+	.	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 754 963 +
Chr1	stalkie_big_nohaplotig	exon	9357823	9357986	100	+	.	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 964 1127 +
Chr1	stalkie_big_nohaplotig	exon	9358056	9358417	100	+	.	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 1128 1489 +
Chr1	stalkie_big_nohaplotig	exon	9358491	9359185	98	+	.	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 1490 2184 +
Chr1	stalkie_big_nohaplotig	exon	9359257	9359503	100	+	.	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 2185 2431 +
Chr1	stalkie_big_nohaplotig	exon	9359773	9359942	100	+	.	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 2432 2601 +
Chr1	stalkie_big_nohaplotig	exon	9360011	9360139	100	+	.	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 2602 2730 +
Chr1	stalkie_big_nohaplotig	exon	9361546	9361827	100	+	.	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 2731 3012 +
Chr1	stalkie_big_nohaplotig	exon	9361889	9362146	98	+	.	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 3013 3270 +
Chr1	stalkie_big_nohaplotig	CDS	9354351	9354512	.	+	0	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 1 162 +
Chr1	stalkie_big_nohaplotig	CDS	9356762	9357013	.	+	0	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 163 414 +
Chr1	stalkie_big_nohaplotig	CDS	9357099	9357273	.	+	0	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 415 589 +
Chr1	stalkie_big_nohaplotig	CDS	9357332	9357495	.	+	2	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 590 753 +
Chr1	stalkie_big_nohaplotig	CDS	9357551	9357760	.	+	0	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 754 963 +
Chr1	stalkie_big_nohaplotig	CDS	9357823	9357986	.	+	0	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 964 1127 +
Chr1	stalkie_big_nohaplotig	CDS	9358056	9358417	.	+	1	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 1128 1489 +
Chr1	stalkie_big_nohaplotig	CDS	9358491	9359185	.	+	2	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 1490 2184 +
Chr1	stalkie_big_nohaplotig	CDS	9359257	9359503	.	+	0	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 2185 2431 +
Chr1	stalkie_big_nohaplotig	CDS	9359773	9359942	.	+	2	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 2432 2601 +
Chr1	stalkie_big_nohaplotig	CDS	9360011	9360139	.	+	0	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 2602 2730 +
Chr1	stalkie_big_nohaplotig	CDS	9361546	9361827	.	+	0	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 2731 3012 +
Chr1	stalkie_big_nohaplotig	CDS	9361889	9362146	.	+	0	Parent=FBgn0023001.1.mrna1;Target=FBgn0023001.1 3013 3270 +
Chr1	gffcl	locus	9363948	9365740	.	-	.	ID=RLOC_00005579;geneIDs=FBgn0035266.1.path1;transcripts=FBgn0035266.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9363948	9365740	.	-	.	ID=FBgn0035266.1.mrna1;geneID=FBgn0035266.1.path1;Name=FBgn0035266.1;Dir=sensecoverage=100.0;identity=99.5;matches=1715;mismatches=8;indels=0;unknowns=2;locus=RLOC_00005579
Chr1	stalkie_big_nohaplotig	exon	9363948	9365044	99	-	.	Parent=FBgn0035266.1.mrna1;Target=FBgn0035266.1 629 1725 +
Chr1	stalkie_big_nohaplotig	exon	9365113	9365740	99	-	.	Parent=FBgn0035266.1.mrna1;Target=FBgn0035266.1 1 628 +
Chr1	stalkie_big_nohaplotig	CDS	9363948	9365044	.	-	2	Parent=FBgn0035266.1.mrna1;Target=FBgn0035266.1 629 1725 +
Chr1	stalkie_big_nohaplotig	CDS	9365113	9365740	.	-	0	Parent=FBgn0035266.1.mrna1;Target=FBgn0035266.1 1 628 +
Chr1	gffcl	locus	9410491	9413141	.	-	.	ID=RLOC_00005580;geneIDs=ORF2773.path1;transcripts=ORF2773.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9410491	9413141	.	-	.	ID=ORF2773.mrna1;geneID=ORF2773.path1;Name=ORF2773;Dir=sensecoverage=99.8;identity=99.4;matches=800;mismatches=5;indels=0;unknowns=0;locus=RLOC_00005580
Chr1	stalkie_big_nohaplotig	exon	9410491	9411175	99	-	.	Parent=ORF2773.mrna1;Target=ORF2773 123 807 +
Chr1	stalkie_big_nohaplotig	exon	9412094	9412139	100	-	.	Parent=ORF2773.mrna1;Target=ORF2773 77 122 +
Chr1	stalkie_big_nohaplotig	exon	9413068	9413141	98	-	.	Parent=ORF2773.mrna1;Target=ORF2773 3 76 +
Chr1	stalkie_big_nohaplotig	CDS	9410491	9411175	.	-	1	Parent=ORF2773.mrna1;Target=ORF2773 123 807 +
Chr1	stalkie_big_nohaplotig	CDS	9412094	9412139	.	-	2	Parent=ORF2773.mrna1;Target=ORF2773 77 122 +
Chr1	stalkie_big_nohaplotig	CDS	9413068	9413140	.	-	0	Parent=ORF2773.mrna1;Target=ORF2773 4 76 +
Chr1	gffcl	locus	9413195	9413709	.	+	.	ID=RLOC_00005581;geneIDs=comp71806_c0_seq1.path1;transcripts=comp71806_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9413195	9413709	.	+	.	ID=comp71806_c0_seq1.mrna1;geneID=comp71806_c0_seq1.path1;Name=comp71806_c0_seq1;Dir=indeterminatecoverage=97.9;identity=96.1;matches=498;mismatches=14;indels=6;unknowns=0;Target=comp71806_c0_seq1 526 12 .;CDS_Target=comp71806_c0_seq1 97 92 .;locus=RLOC_00005581
Chr1	stalkie_big_nohaplotig	exon	9413195	9413709	96	+	.	Parent=comp71806_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9413275	9413280	.	+	0	Parent=comp71806_c0_seq1.mrna1
Chr1	gffcl	locus	9417455	9423991	.	+	.	ID=RLOC_00005582;geneIDs=FBgn0027594.1.path1,comp161582_c0_seq1.path1;transcripts=FBgn0027594.1.mrna1,comp161582_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9417455	9423645	.	+	.	ID=FBgn0027594.1.mrna1;geneID=FBgn0027594.1.path1;Name=FBgn0027594.1;Dir=sensecoverage=100.0;identity=100.0;matches=2795;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005582
Chr1	stalkie_big_nohaplotig	exon	9417455	9417542	100	+	.	Parent=FBgn0027594.1.mrna1;Target=FBgn0027594.1 1 88 +
Chr1	stalkie_big_nohaplotig	exon	9418014	9418260	100	+	.	Parent=FBgn0027594.1.mrna1;Target=FBgn0027594.1 89 335 +
Chr1	stalkie_big_nohaplotig	exon	9418330	9419369	100	+	.	Parent=FBgn0027594.1.mrna1;Target=FBgn0027594.1 336 1375 +
Chr1	stalkie_big_nohaplotig	exon	9419764	9419970	100	+	.	Parent=FBgn0027594.1.mrna1;Target=FBgn0027594.1 1376 1582 +
Chr1	stalkie_big_nohaplotig	exon	9420038	9420370	99	+	.	Parent=FBgn0027594.1.mrna1;Target=FBgn0027594.1 1583 1915 +
Chr1	stalkie_big_nohaplotig	exon	9420434	9420601	100	+	.	Parent=FBgn0027594.1.mrna1;Target=FBgn0027594.1 1916 2083 +
Chr1	stalkie_big_nohaplotig	exon	9420668	9420964	100	+	.	Parent=FBgn0027594.1.mrna1;Target=FBgn0027594.1 2084 2380 +
Chr1	stalkie_big_nohaplotig	exon	9421023	9421178	100	+	.	Parent=FBgn0027594.1.mrna1;Target=FBgn0027594.1 2381 2536 +
Chr1	stalkie_big_nohaplotig	exon	9423386	9423645	100	+	.	Parent=FBgn0027594.1.mrna1;Target=FBgn0027594.1 2537 2796 +
Chr1	stalkie_big_nohaplotig	CDS	9417455	9417542	.	+	0	Parent=FBgn0027594.1.mrna1;Target=FBgn0027594.1 1 88 +
Chr1	stalkie_big_nohaplotig	CDS	9418014	9418260	.	+	2	Parent=FBgn0027594.1.mrna1;Target=FBgn0027594.1 89 335 +
Chr1	stalkie_big_nohaplotig	CDS	9418330	9419369	.	+	1	Parent=FBgn0027594.1.mrna1;Target=FBgn0027594.1 336 1375 +
Chr1	stalkie_big_nohaplotig	CDS	9419764	9419970	.	+	2	Parent=FBgn0027594.1.mrna1;Target=FBgn0027594.1 1376 1582 +
Chr1	stalkie_big_nohaplotig	CDS	9420038	9420370	.	+	2	Parent=FBgn0027594.1.mrna1;Target=FBgn0027594.1 1583 1915 +
Chr1	stalkie_big_nohaplotig	CDS	9420434	9420601	.	+	2	Parent=FBgn0027594.1.mrna1;Target=FBgn0027594.1 1916 2083 +
Chr1	stalkie_big_nohaplotig	CDS	9420668	9420964	.	+	2	Parent=FBgn0027594.1.mrna1;Target=FBgn0027594.1 2084 2380 +
Chr1	stalkie_big_nohaplotig	CDS	9421023	9421178	.	+	2	Parent=FBgn0027594.1.mrna1;Target=FBgn0027594.1 2381 2536 +
Chr1	stalkie_big_nohaplotig	CDS	9423386	9423645	.	+	2	Parent=FBgn0027594.1.mrna1;Target=FBgn0027594.1 2537 2796 +
Chr1	stalkie_big_nohaplotig	mRNA	9417742	9423991	.	+	.	ID=comp161582_c0_seq1.mrna1;geneID=comp161582_c0_seq1.path1;Name=comp161582_c0_seq1;Dir=sensecoverage=98.9;identity=99.4;matches=3390;mismatches=7;indels=14;unknowns=0;locus=RLOC_00005582
Chr1	stalkie_big_nohaplotig	exon	9417742	9418260	96	+	.	Parent=comp161582_c0_seq1.mrna1;Target=comp161582_c0_seq1 16 540 +
Chr1	stalkie_big_nohaplotig	exon	9418330	9419369	100	+	.	Parent=comp161582_c0_seq1.mrna1;Target=comp161582_c0_seq1 541 1580 +
Chr1	stalkie_big_nohaplotig	exon	9419764	9419970	100	+	.	Parent=comp161582_c0_seq1.mrna1;Target=comp161582_c0_seq1 1581 1787 +
Chr1	stalkie_big_nohaplotig	exon	9420038	9420370	99	+	.	Parent=comp161582_c0_seq1.mrna1;Target=comp161582_c0_seq1 1788 2120 +
Chr1	stalkie_big_nohaplotig	exon	9420434	9420601	100	+	.	Parent=comp161582_c0_seq1.mrna1;Target=comp161582_c0_seq1 2121 2288 +
Chr1	stalkie_big_nohaplotig	exon	9420668	9420964	100	+	.	Parent=comp161582_c0_seq1.mrna1;Target=comp161582_c0_seq1 2289 2585 +
Chr1	stalkie_big_nohaplotig	exon	9421023	9421178	100	+	.	Parent=comp161582_c0_seq1.mrna1;Target=comp161582_c0_seq1 2586 2741 +
Chr1	stalkie_big_nohaplotig	exon	9421663	9421737	100	+	.	Parent=comp161582_c0_seq1.mrna1;Target=comp161582_c0_seq1 2742 2816 +
Chr1	stalkie_big_nohaplotig	exon	9423386	9423991	100	+	.	Parent=comp161582_c0_seq1.mrna1;Target=comp161582_c0_seq1 2817 3422 +
Chr1	stalkie_big_nohaplotig	CDS	9418430	9419369	.	+	0	Parent=comp161582_c0_seq1.mrna1;Target=comp161582_c0_seq1 641 1580 +
Chr1	stalkie_big_nohaplotig	CDS	9419764	9419970	.	+	2	Parent=comp161582_c0_seq1.mrna1;Target=comp161582_c0_seq1 1581 1787 +
Chr1	stalkie_big_nohaplotig	CDS	9420038	9420370	.	+	2	Parent=comp161582_c0_seq1.mrna1;Target=comp161582_c0_seq1 1788 2120 +
Chr1	stalkie_big_nohaplotig	CDS	9420434	9420601	.	+	2	Parent=comp161582_c0_seq1.mrna1;Target=comp161582_c0_seq1 2121 2288 +
Chr1	stalkie_big_nohaplotig	CDS	9420668	9420964	.	+	2	Parent=comp161582_c0_seq1.mrna1;Target=comp161582_c0_seq1 2289 2585 +
Chr1	stalkie_big_nohaplotig	CDS	9421023	9421178	.	+	2	Parent=comp161582_c0_seq1.mrna1;Target=comp161582_c0_seq1 2586 2741 +
Chr1	stalkie_big_nohaplotig	CDS	9421663	9421737	.	+	2	Parent=comp161582_c0_seq1.mrna1;Target=comp161582_c0_seq1 2742 2816 +
Chr1	stalkie_big_nohaplotig	CDS	9423386	9423648	.	+	2	Parent=comp161582_c0_seq1.mrna1;Target=comp161582_c0_seq1 2817 3079 +
Chr1	gffcl	locus	9424193	9424575	.	-	.	ID=RLOC_00005583;geneIDs=comp149378_c0_seq1.path1;transcripts=comp149378_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9424193	9424575	.	-	.	ID=comp149378_c0_seq1.mrna1;geneID=comp149378_c0_seq1.path1;Name=comp149378_c0_seq1;Dir=indeterminatecoverage=96.5;identity=99.7;matches=382;mismatches=1;indels=0;unknowns=0;Target=comp149378_c0_seq1 383 1 .;CDS_Target=comp149378_c0_seq1 115 2 .;locus=RLOC_00005583
Chr1	stalkie_big_nohaplotig	exon	9424193	9424575	99	-	.	Parent=comp149378_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9424461	9424574	.	-	0	Parent=comp149378_c0_seq1.mrna1
Chr1	gffcl	locus	9429843	9430766	.	-	.	ID=RLOC_00005584;geneIDs=FBgn0019830.2.path1;transcripts=FBgn0019830.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9429843	9430766	.	-	.	ID=FBgn0019830.2.mrna1;geneID=FBgn0019830.2.path1;Name=FBgn0019830.2;Dir=indeterminatecoverage=100.0;identity=99.6;matches=920;mismatches=4;indels=0;unknowns=0;Target=FBgn0019830.2 924 1 .;locus=RLOC_00005584
Chr1	stalkie_big_nohaplotig	exon	9429843	9430766	99	-	.	Parent=FBgn0019830.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9429843	9430766	.	-	0	Parent=FBgn0019830.2.mrna1
Chr1	gffcl	locus	9432320	9433251	.	-	.	ID=RLOC_00005585;geneIDs=FBgn0035260.path1;transcripts=FBgn0035260.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9432320	9433251	.	-	.	ID=FBgn0035260.mrna1;geneID=FBgn0035260.path1;Name=FBgn0035260;Dir=indeterminatecoverage=99.7;identity=99.7;matches=930;mismatches=2;indels=1;unknowns=0;Target=FBgn0035260 933 1 .;CDS_Target=FBgn0035260 23 3 .;locus=RLOC_00005585
Chr1	stalkie_big_nohaplotig	exon	9432320	9433251	99	-	.	Parent=FBgn0035260.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9433230	9433249	.	-	0	Parent=FBgn0035260.mrna1
Chr1	gffcl	locus	9488207	9488631	.	+	.	ID=RLOC_00005586;geneIDs=comp142442_c0_seq1.path1;transcripts=comp142442_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9488207	9488631	.	+	.	ID=comp142442_c0_seq1.mrna1;geneID=comp142442_c0_seq1.path1;Name=comp142442_c0_seq1;Dir=indeterminatecoverage=62.0;identity=100.0;matches=425;mismatches=0;indels=0;unknowns=0;Target=comp142442_c0_seq1 684 260 .;CDS_Target=comp142442_c0_seq1 345 262 .;locus=RLOC_00005586
Chr1	stalkie_big_nohaplotig	exon	9488207	9488631	100	+	.	Parent=comp142442_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9488209	9488292	.	+	0	Parent=comp142442_c0_seq1.mrna1
Chr1	gffcl	locus	9534184	9537029	.	+	.	ID=RLOC_00005588;geneIDs=FBgn0035255.1.path1;transcripts=FBgn0035255.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9534184	9537029	.	+	.	ID=FBgn0035255.1.mrna1;geneID=FBgn0035255.1.path1;Name=FBgn0035255.1;Dir=sensecoverage=100.0;identity=98.7;matches=930;mismatches=12;indels=0;unknowns=0;locus=RLOC_00005588
Chr1	stalkie_big_nohaplotig	exon	9534184	9534524	98	+	.	Parent=FBgn0035255.1.mrna1;Target=FBgn0035255.1 1 341 +
Chr1	stalkie_big_nohaplotig	exon	9534803	9534904	99	+	.	Parent=FBgn0035255.1.mrna1;Target=FBgn0035255.1 342 443 +
Chr1	stalkie_big_nohaplotig	exon	9534988	9535052	100	+	.	Parent=FBgn0035255.1.mrna1;Target=FBgn0035255.1 444 508 +
Chr1	stalkie_big_nohaplotig	exon	9535115	9535254	99	+	.	Parent=FBgn0035255.1.mrna1;Target=FBgn0035255.1 509 648 +
Chr1	stalkie_big_nohaplotig	exon	9536679	9536907	97	+	.	Parent=FBgn0035255.1.mrna1;Target=FBgn0035255.1 649 877 +
Chr1	stalkie_big_nohaplotig	exon	9536965	9537029	100	+	.	Parent=FBgn0035255.1.mrna1;Target=FBgn0035255.1 878 942 +
Chr1	stalkie_big_nohaplotig	CDS	9534184	9534524	.	+	0	Parent=FBgn0035255.1.mrna1;Target=FBgn0035255.1 1 341 +
Chr1	stalkie_big_nohaplotig	CDS	9534803	9534904	.	+	1	Parent=FBgn0035255.1.mrna1;Target=FBgn0035255.1 342 443 +
Chr1	stalkie_big_nohaplotig	CDS	9534988	9535052	.	+	1	Parent=FBgn0035255.1.mrna1;Target=FBgn0035255.1 444 508 +
Chr1	stalkie_big_nohaplotig	CDS	9535115	9535254	.	+	2	Parent=FBgn0035255.1.mrna1;Target=FBgn0035255.1 509 648 +
Chr1	stalkie_big_nohaplotig	CDS	9536679	9536907	.	+	0	Parent=FBgn0035255.1.mrna1;Target=FBgn0035255.1 649 877 +
Chr1	stalkie_big_nohaplotig	CDS	9536965	9537029	.	+	2	Parent=FBgn0035255.1.mrna1;Target=FBgn0035255.1 878 942 +
Chr1	gffcl	locus	9538179	9539701	.	+	.	ID=RLOC_00005589;geneIDs=FBgn0026372.1.path1;transcripts=FBgn0026372.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9538179	9539701	.	+	.	ID=FBgn0026372.1.mrna1;geneID=FBgn0026372.1.path1;Name=FBgn0026372.1;Dir=sensecoverage=100.0;identity=99.4;matches=981;mismatches=6;indels=0;unknowns=0;locus=RLOC_00005589
Chr1	stalkie_big_nohaplotig	exon	9538179	9538344	100	+	.	Parent=FBgn0026372.1.mrna1;Target=FBgn0026372.1 1 166 +
Chr1	stalkie_big_nohaplotig	exon	9538764	9539197	99	+	.	Parent=FBgn0026372.1.mrna1;Target=FBgn0026372.1 167 600 +
Chr1	stalkie_big_nohaplotig	exon	9539255	9539382	96	+	.	Parent=FBgn0026372.1.mrna1;Target=FBgn0026372.1 601 728 +
Chr1	stalkie_big_nohaplotig	exon	9539443	9539701	99	+	.	Parent=FBgn0026372.1.mrna1;Target=FBgn0026372.1 729 987 +
Chr1	stalkie_big_nohaplotig	CDS	9538179	9538344	.	+	0	Parent=FBgn0026372.1.mrna1;Target=FBgn0026372.1 1 166 +
Chr1	stalkie_big_nohaplotig	CDS	9538764	9539197	.	+	2	Parent=FBgn0026372.1.mrna1;Target=FBgn0026372.1 167 600 +
Chr1	stalkie_big_nohaplotig	CDS	9539255	9539382	.	+	0	Parent=FBgn0026372.1.mrna1;Target=FBgn0026372.1 601 728 +
Chr1	stalkie_big_nohaplotig	CDS	9539443	9539701	.	+	1	Parent=FBgn0026372.1.mrna1;Target=FBgn0026372.1 729 987 +
Chr1	stalkie_big_nohaplotig	mRNA	9544310	9546677	.	+	.	ID=comp116452_c0_seq1.mrna1;geneID=comp116452_c0_seq1.path1;Name=comp116452_c0_seq1;Dir=sensecoverage=100.0;identity=97.0;matches=391;mismatches=4;indels=8;unknowns=0;locus=RLOC_00005590
Chr1	stalkie_big_nohaplotig	exon	9544310	9544331	100	+	.	Parent=comp116452_c0_seq1.mrna1;Target=comp116452_c0_seq1 1 22 +
Chr1	stalkie_big_nohaplotig	exon	9546305	9546677	96	+	.	Parent=comp116452_c0_seq1.mrna1;Target=comp116452_c0_seq1 23 403 +
Chr1	stalkie_big_nohaplotig	CDS	9544312	9544331	.	+	0	Parent=comp116452_c0_seq1.mrna1;Target=comp116452_c0_seq1 3 22 +
Chr1	stalkie_big_nohaplotig	CDS	9546305	9546356	.	+	1	Parent=comp116452_c0_seq1.mrna1;Target=comp116452_c0_seq1 23 74 +
Chr1	stalkie_big_nohaplotig	mRNA	9547709	9549592	.	+	.	ID=comp152134_c0_seq1.mrna1;geneID=comp152134_c0_seq1.path1;Name=comp152134_c0_seq1;Dir=sensecoverage=100.0;identity=98.7;matches=943;mismatches=8;indels=4;unknowns=0;Target=comp152134_c0_seq1 131 463 +;locus=RLOC_00005590
Chr1	stalkie_big_nohaplotig	exon	9547709	9548635	98	+	.	Parent=comp152134_c0_seq1.mrna1;Target=comp152134_c0_seq1 1 931 +
Chr1	stalkie_big_nohaplotig	exon	9549569	9549592	100	+	.	Parent=comp152134_c0_seq1.mrna1;Target=comp152134_c0_seq1 932 955 +
Chr1	stalkie_big_nohaplotig	CDS	9547839	9548170	.	+	0	Parent=comp152134_c0_seq1.mrna1
Chr1	gffcl	locus	9564731	9565159	.	-	.	ID=RLOC_00005591;geneIDs=comp146469_c1_seq1.path1;transcripts=comp146469_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9564731	9565159	.	-	.	ID=comp146469_c1_seq1.mrna1;geneID=comp146469_c1_seq1.path1;Name=comp146469_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=421;mismatches=2;indels=6;unknowns=0;Target=comp146469_c1_seq1 423 1 .;CDS_Target=comp146469_c1_seq1 62 3 .;locus=RLOC_00005591
Chr1	stalkie_big_nohaplotig	exon	9564731	9565159	98	-	.	Parent=comp146469_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9565098	9565157	.	-	0	Parent=comp146469_c1_seq1.mrna1
Chr1	gffcl	locus	9565640	9566791	.	-	.	ID=RLOC_00005592;geneIDs=FBgn0035252.1.path1;transcripts=FBgn0035252.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9565640	9566791	.	-	.	ID=FBgn0035252.1.mrna1;geneID=FBgn0035252.1.path1;Name=FBgn0035252.1;Dir=sensecoverage=100.0;identity=99.7;matches=616;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005592
Chr1	stalkie_big_nohaplotig	exon	9565640	9565762	99	-	.	Parent=FBgn0035252.1.mrna1;Target=FBgn0035252.1 496 618 +
Chr1	stalkie_big_nohaplotig	exon	9565838	9566120	99	-	.	Parent=FBgn0035252.1.mrna1;Target=FBgn0035252.1 213 495 +
Chr1	stalkie_big_nohaplotig	exon	9566331	9566426	100	-	.	Parent=FBgn0035252.1.mrna1;Target=FBgn0035252.1 117 212 +
Chr1	stalkie_big_nohaplotig	exon	9566488	9566580	100	-	.	Parent=FBgn0035252.1.mrna1;Target=FBgn0035252.1 24 116 +
Chr1	stalkie_big_nohaplotig	exon	9566769	9566791	100	-	.	Parent=FBgn0035252.1.mrna1;Target=FBgn0035252.1 1 23 +
Chr1	stalkie_big_nohaplotig	CDS	9565640	9565762	.	-	0	Parent=FBgn0035252.1.mrna1;Target=FBgn0035252.1 496 618 +
Chr1	stalkie_big_nohaplotig	CDS	9565838	9566120	.	-	1	Parent=FBgn0035252.1.mrna1;Target=FBgn0035252.1 213 495 +
Chr1	stalkie_big_nohaplotig	CDS	9566331	9566426	.	-	1	Parent=FBgn0035252.1.mrna1;Target=FBgn0035252.1 117 212 +
Chr1	stalkie_big_nohaplotig	CDS	9566488	9566580	.	-	1	Parent=FBgn0035252.1.mrna1;Target=FBgn0035252.1 24 116 +
Chr1	stalkie_big_nohaplotig	CDS	9566769	9566791	.	-	0	Parent=FBgn0035252.1.mrna1;Target=FBgn0035252.1 1 23 +
Chr1	gffcl	locus	9574020	9574377	.	+	.	ID=RLOC_00005594;geneIDs=FBgn0259203.1.path1;transcripts=FBgn0259203.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9574020	9574377	.	+	.	ID=FBgn0259203.1.mrna1;geneID=FBgn0259203.1.path1;Name=FBgn0259203.1;Dir=sensecoverage=100.0;identity=100.0;matches=297;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005594
Chr1	stalkie_big_nohaplotig	exon	9574020	9574150	100	+	.	Parent=FBgn0259203.1.mrna1;Target=FBgn0259203.1 1 131 +
Chr1	stalkie_big_nohaplotig	exon	9574212	9574377	100	+	.	Parent=FBgn0259203.1.mrna1;Target=FBgn0259203.1 132 297 +
Chr1	stalkie_big_nohaplotig	CDS	9574020	9574150	.	+	0	Parent=FBgn0259203.1.mrna1;Target=FBgn0259203.1 1 131 +
Chr1	stalkie_big_nohaplotig	CDS	9574212	9574377	.	+	1	Parent=FBgn0259203.1.mrna1;Target=FBgn0259203.1 132 297 +
Chr1	gffcl	locus	9574401	9579035	.	+	.	ID=RLOC_00005595;geneIDs=FBgn0002909.1.path1;transcripts=FBgn0002909.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9574401	9579035	.	+	.	ID=FBgn0002909.1.mrna1;geneID=FBgn0002909.1.path1;Name=FBgn0002909.1;Dir=sensecoverage=100.0;identity=99.0;matches=4066;mismatches=38;indels=3;unknowns=0;locus=RLOC_00005595
Chr1	stalkie_big_nohaplotig	exon	9574401	9574480	100	+	.	Parent=FBgn0002909.1.mrna1;Target=FBgn0002909.1 1 80 +
Chr1	stalkie_big_nohaplotig	exon	9574598	9575256	100	+	.	Parent=FBgn0002909.1.mrna1;Target=FBgn0002909.1 81 739 +
Chr1	stalkie_big_nohaplotig	exon	9575336	9576472	97	+	.	Parent=FBgn0002909.1.mrna1;Target=FBgn0002909.1 740 1879 +
Chr1	stalkie_big_nohaplotig	exon	9576532	9576618	100	+	.	Parent=FBgn0002909.1.mrna1;Target=FBgn0002909.1 1880 1966 +
Chr1	stalkie_big_nohaplotig	exon	9576679	9576720	100	+	.	Parent=FBgn0002909.1.mrna1;Target=FBgn0002909.1 1967 2008 +
Chr1	stalkie_big_nohaplotig	exon	9576782	9578592	99	+	.	Parent=FBgn0002909.1.mrna1;Target=FBgn0002909.1 2009 3819 +
Chr1	stalkie_big_nohaplotig	exon	9578685	9578837	98	+	.	Parent=FBgn0002909.1.mrna1;Target=FBgn0002909.1 3820 3972 +
Chr1	stalkie_big_nohaplotig	exon	9578901	9579035	100	+	.	Parent=FBgn0002909.1.mrna1;Target=FBgn0002909.1 3973 4107 +
Chr1	stalkie_big_nohaplotig	CDS	9574401	9574480	.	+	0	Parent=FBgn0002909.1.mrna1;Target=FBgn0002909.1 1 80 +
Chr1	stalkie_big_nohaplotig	CDS	9574598	9575256	.	+	1	Parent=FBgn0002909.1.mrna1;Target=FBgn0002909.1 81 739 +
Chr1	stalkie_big_nohaplotig	CDS	9575336	9576472	.	+	2	Parent=FBgn0002909.1.mrna1;Target=FBgn0002909.1 740 1879 +
Chr1	stalkie_big_nohaplotig	CDS	9576532	9576618	.	+	2	Parent=FBgn0002909.1.mrna1;Target=FBgn0002909.1 1880 1966 +
Chr1	stalkie_big_nohaplotig	CDS	9576679	9576720	.	+	2	Parent=FBgn0002909.1.mrna1;Target=FBgn0002909.1 1967 2008 +
Chr1	stalkie_big_nohaplotig	CDS	9576782	9578592	.	+	2	Parent=FBgn0002909.1.mrna1;Target=FBgn0002909.1 2009 3819 +
Chr1	stalkie_big_nohaplotig	CDS	9578685	9578837	.	+	0	Parent=FBgn0002909.1.mrna1;Target=FBgn0002909.1 3820 3972 +
Chr1	stalkie_big_nohaplotig	CDS	9578901	9579035	.	+	0	Parent=FBgn0002909.1.mrna1;Target=FBgn0002909.1 3973 4107 +
Chr1	gffcl	locus	9582616	9583894	.	-	.	ID=RLOC_00005596;geneIDs=FBgn0015793.1.path1;transcripts=FBgn0015793.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9582616	9583894	.	-	.	ID=FBgn0015793.1.mrna1;geneID=FBgn0015793.1.path1;Name=FBgn0015793.1;Dir=sensecoverage=100.0;identity=98.3;matches=769;mismatches=2;indels=11;unknowns=0;locus=RLOC_00005596
Chr1	stalkie_big_nohaplotig	exon	9582616	9582717	100	-	.	Parent=FBgn0015793.1.mrna1;Target=FBgn0015793.1 670 771 +
Chr1	stalkie_big_nohaplotig	exon	9582787	9583043	100	-	.	Parent=FBgn0015793.1.mrna1;Target=FBgn0015793.1 413 669 +
Chr1	stalkie_big_nohaplotig	exon	9583336	9583420	100	-	.	Parent=FBgn0015793.1.mrna1;Target=FBgn0015793.1 328 412 +
Chr1	stalkie_big_nohaplotig	exon	9583557	9583894	96	-	.	Parent=FBgn0015793.1.mrna1;Target=FBgn0015793.1 1 327 +
Chr1	stalkie_big_nohaplotig	CDS	9582616	9582717	.	-	0	Parent=FBgn0015793.1.mrna1;Target=FBgn0015793.1 670 771 +
Chr1	stalkie_big_nohaplotig	CDS	9582787	9583043	.	-	2	Parent=FBgn0015793.1.mrna1;Target=FBgn0015793.1 413 669 +
Chr1	stalkie_big_nohaplotig	CDS	9583336	9583420	.	-	0	Parent=FBgn0015793.1.mrna1;Target=FBgn0015793.1 328 412 +
Chr1	stalkie_big_nohaplotig	CDS	9583557	9583769	.	-	0	Parent=FBgn0015793.1.mrna1;Target=FBgn0015793.1 115 327 +
Chr1	gffcl	locus	9606485	9628573	.	+	.	ID=RLOC_00005597;geneIDs=FBgn0027569.1.path1;transcripts=FBgn0027569.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9606485	9628573	.	+	.	ID=FBgn0027569.1.mrna1;geneID=FBgn0027569.1.path1;Name=FBgn0027569.1;Dir=sensecoverage=100.0;identity=99.7;matches=1851;mismatches=6;indels=0;unknowns=0;locus=RLOC_00005597
Chr1	stalkie_big_nohaplotig	exon	9606485	9606730	100	+	.	Parent=FBgn0027569.1.mrna1;Target=FBgn0027569.1 1 246 +
Chr1	stalkie_big_nohaplotig	exon	9606792	9606878	98	+	.	Parent=FBgn0027569.1.mrna1;Target=FBgn0027569.1 247 333 +
Chr1	stalkie_big_nohaplotig	exon	9607544	9607851	99	+	.	Parent=FBgn0027569.1.mrna1;Target=FBgn0027569.1 334 641 +
Chr1	stalkie_big_nohaplotig	exon	9609005	9609089	98	+	.	Parent=FBgn0027569.1.mrna1;Target=FBgn0027569.1 642 726 +
Chr1	stalkie_big_nohaplotig	exon	9609162	9609310	99	+	.	Parent=FBgn0027569.1.mrna1;Target=FBgn0027569.1 727 875 +
Chr1	stalkie_big_nohaplotig	exon	9610307	9610367	100	+	.	Parent=FBgn0027569.1.mrna1;Target=FBgn0027569.1 876 936 +
Chr1	stalkie_big_nohaplotig	exon	9626550	9626774	100	+	.	Parent=FBgn0027569.1.mrna1;Target=FBgn0027569.1 937 1161 +
Chr1	stalkie_big_nohaplotig	exon	9626906	9627137	100	+	.	Parent=FBgn0027569.1.mrna1;Target=FBgn0027569.1 1162 1393 +
Chr1	stalkie_big_nohaplotig	exon	9627353	9627555	100	+	.	Parent=FBgn0027569.1.mrna1;Target=FBgn0027569.1 1394 1596 +
Chr1	stalkie_big_nohaplotig	exon	9628244	9628379	99	+	.	Parent=FBgn0027569.1.mrna1;Target=FBgn0027569.1 1597 1732 +
Chr1	stalkie_big_nohaplotig	exon	9628449	9628573	99	+	.	Parent=FBgn0027569.1.mrna1;Target=FBgn0027569.1 1733 1857 +
Chr1	stalkie_big_nohaplotig	CDS	9606485	9606730	.	+	0	Parent=FBgn0027569.1.mrna1;Target=FBgn0027569.1 1 246 +
Chr1	stalkie_big_nohaplotig	CDS	9606792	9606878	.	+	0	Parent=FBgn0027569.1.mrna1;Target=FBgn0027569.1 247 333 +
Chr1	stalkie_big_nohaplotig	CDS	9607544	9607851	.	+	0	Parent=FBgn0027569.1.mrna1;Target=FBgn0027569.1 334 641 +
Chr1	stalkie_big_nohaplotig	CDS	9609005	9609089	.	+	1	Parent=FBgn0027569.1.mrna1;Target=FBgn0027569.1 642 726 +
Chr1	stalkie_big_nohaplotig	CDS	9609162	9609310	.	+	0	Parent=FBgn0027569.1.mrna1;Target=FBgn0027569.1 727 875 +
Chr1	stalkie_big_nohaplotig	CDS	9610307	9610367	.	+	1	Parent=FBgn0027569.1.mrna1;Target=FBgn0027569.1 876 936 +
Chr1	stalkie_big_nohaplotig	CDS	9626550	9626774	.	+	0	Parent=FBgn0027569.1.mrna1;Target=FBgn0027569.1 937 1161 +
Chr1	stalkie_big_nohaplotig	CDS	9626906	9627137	.	+	0	Parent=FBgn0027569.1.mrna1;Target=FBgn0027569.1 1162 1393 +
Chr1	stalkie_big_nohaplotig	CDS	9627353	9627555	.	+	2	Parent=FBgn0027569.1.mrna1;Target=FBgn0027569.1 1394 1596 +
Chr1	stalkie_big_nohaplotig	CDS	9628244	9628379	.	+	0	Parent=FBgn0027569.1.mrna1;Target=FBgn0027569.1 1597 1732 +
Chr1	stalkie_big_nohaplotig	CDS	9628449	9628573	.	+	2	Parent=FBgn0027569.1.mrna1;Target=FBgn0027569.1 1733 1857 +
Chr1	gffcl	locus	9628884	9629425	.	-	.	ID=RLOC_00005598;geneIDs=comp151556_c1_seq1.path1;transcripts=comp151556_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9628884	9629425	.	-	.	ID=comp151556_c1_seq1.mrna1;geneID=comp151556_c1_seq1.path1;Name=comp151556_c1_seq1;Dir=indeterminatecoverage=97.0;identity=98.7;matches=538;mismatches=4;indels=3;unknowns=0;Target=comp151556_c1_seq1 562 18 .;CDS_Target=comp151556_c1_seq1 171 121 .;locus=RLOC_00005598
Chr1	stalkie_big_nohaplotig	exon	9628884	9629425	98	-	.	Parent=comp151556_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9629272	9629322	.	-	0	Parent=comp151556_c1_seq1.mrna1
Chr1	gffcl	locus	9631551	11083149	.	.	.	ID=RLOC_00005599;geneIDs=comp113406_c0_seq1.path1,comp135299_c1_seq1.path1,comp151819_c0_seq1.path1,comp156973_c0_seq1.path1,comp163416_c0_seq1.path1;transcripts=comp151819_c0_seq1.mrna1,comp156973_c0_seq1.mrna1,comp163416_c0_seq1.mrna1,comp113406_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9631551	11083149	.	-	.	ID=comp151819_c0_seq1.mrna1;geneID=comp151819_c0_seq1.path1;Name=comp151819_c0_seq1;Dir=indeterminatecoverage=87.5;identity=97.1;matches=1407;mismatches=10;indels=32;unknowns=0;Target=comp151819_c0_seq1 1075 935 .;locus=RLOC_00005599
Chr1	stalkie_big_nohaplotig	exon	9631551	9631923	99	-	.	Parent=comp151819_c0_seq1.mrna1;Target=comp151819_c0_seq1 1662 1291 .
Chr1	stalkie_big_nohaplotig	exon	11036736	11037724	97	-	.	Parent=comp151819_c0_seq1.mrna1;Target=comp151819_c0_seq1 1290 283 .
Chr1	stalkie_big_nohaplotig	exon	11039072	11039077	83	-	.	Parent=comp151819_c0_seq1.mrna1;Target=comp151819_c0_seq1 282 277 .
Chr1	stalkie_big_nohaplotig	exon	11041472	11041481	100	-	.	Parent=comp151819_c0_seq1.mrna1;Target=comp151819_c0_seq1 276 267 .
Chr1	stalkie_big_nohaplotig	exon	11043935	11043939	100	-	.	Parent=comp151819_c0_seq1.mrna1;Target=comp151819_c0_seq1 266 262 .
Chr1	stalkie_big_nohaplotig	exon	11055916	11055919	100	-	.	Parent=comp151819_c0_seq1.mrna1;Target=comp151819_c0_seq1 261 258 .
Chr1	stalkie_big_nohaplotig	exon	11060663	11060665	100	-	.	Parent=comp151819_c0_seq1.mrna1;Target=comp151819_c0_seq1 257 255 .
Chr1	stalkie_big_nohaplotig	exon	11068642	11068643	100	-	.	Parent=comp151819_c0_seq1.mrna1;Target=comp151819_c0_seq1 254 253 .
Chr1	stalkie_big_nohaplotig	exon	11071540	11071544	100	-	.	Parent=comp151819_c0_seq1.mrna1;Target=comp151819_c0_seq1 245 241 .
Chr1	stalkie_big_nohaplotig	exon	11073953	11073954	100	-	.	Parent=comp151819_c0_seq1.mrna1;Target=comp151819_c0_seq1 240 239 .
Chr1	stalkie_big_nohaplotig	exon	11077728	11077731	100	-	.	Parent=comp151819_c0_seq1.mrna1;Target=comp151819_c0_seq1 238 235 .
Chr1	stalkie_big_nohaplotig	exon	11083135	11083149	55	-	.	Parent=comp151819_c0_seq1.mrna1;Target=comp151819_c0_seq1 234 208 .
Chr1	stalkie_big_nohaplotig	CDS	11036951	11037085	.	-	0	Parent=comp151819_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9632404	9633152	.	+	.	ID=comp156973_c0_seq1.mrna1;geneID=comp156973_c0_seq1.path1;Name=comp156973_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.5;matches=745;mismatches=4;indels=0;unknowns=0;Target=comp156973_c0_seq1 755 7 .;CDS_Target=comp156973_c0_seq1 476 276 .;locus=RLOC_00005599
Chr1	stalkie_big_nohaplotig	exon	9632404	9633152	99	+	.	Parent=comp156973_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9632673	9632873	.	+	0	Parent=comp156973_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11038929	11040316	.	+	.	ID=comp163416_c0_seq1.mrna1;geneID=comp163416_c0_seq1.path1;Name=comp163416_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.2;matches=1359;mismatches=29;indels=10;unknowns=0;Target=comp163416_c0_seq1 1398 1 .;CDS_Target=comp163416_c0_seq1 659 537 .;locus=RLOC_00005599
Chr1	stalkie_big_nohaplotig	exon	11038929	11040316	97	+	.	Parent=comp163416_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11039465	11039586	.	+	0	Parent=comp163416_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11043484	11043936	.	-	.	ID=comp113406_c0_seq1.mrna1;geneID=comp113406_c0_seq1.path1;Name=comp113406_c0_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=453;mismatches=0;indels=0;unknowns=0;Target=comp113406_c0_seq1 455 3 .;CDS_Target=comp113406_c0_seq1 117 4 .;locus=RLOC_00005599
Chr1	stalkie_big_nohaplotig	exon	11043484	11043936	100	-	.	Parent=comp113406_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11043822	11043935	.	-	0	Parent=comp113406_c0_seq1.mrna1
Chr1	gffcl	locus	9634534	9695700	.	-	.	ID=RLOC_00005600;geneIDs=FBgn0263219.1.path1;transcripts=FBgn0263219.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9634534	9695700	.	-	.	ID=FBgn0263219.1.mrna1;geneID=FBgn0263219.1.path1;Name=FBgn0263219.1;Dir=sensecoverage=99.1;identity=99.8;matches=5747;mismatches=9;indels=0;unknowns=0;locus=RLOC_00005600
Chr1	stalkie_big_nohaplotig	exon	9634534	9634678	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 5667 5811 +
Chr1	stalkie_big_nohaplotig	exon	9634825	9634993	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 5498 5666 +
Chr1	stalkie_big_nohaplotig	exon	9635058	9635207	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 5348 5497 +
Chr1	stalkie_big_nohaplotig	exon	9635616	9635688	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 5275 5347 +
Chr1	stalkie_big_nohaplotig	exon	9635772	9636106	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 4940 5274 +
Chr1	stalkie_big_nohaplotig	exon	9636161	9636307	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 4793 4939 +
Chr1	stalkie_big_nohaplotig	exon	9636364	9636527	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 4629 4792 +
Chr1	stalkie_big_nohaplotig	exon	9636585	9637471	99	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 3742 4628 +
Chr1	stalkie_big_nohaplotig	exon	9637538	9637632	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 3647 3741 +
Chr1	stalkie_big_nohaplotig	exon	9637698	9637850	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 3494 3646 +
Chr1	stalkie_big_nohaplotig	exon	9639638	9639784	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 3347 3493 +
Chr1	stalkie_big_nohaplotig	exon	9640088	9640585	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 2849 3346 +
Chr1	stalkie_big_nohaplotig	exon	9640885	9641047	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 2686 2848 +
Chr1	stalkie_big_nohaplotig	exon	9644118	9644235	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 2568 2685 +
Chr1	stalkie_big_nohaplotig	exon	9647300	9647453	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 2414 2567 +
Chr1	stalkie_big_nohaplotig	exon	9647613	9648049	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 1977 2413 +
Chr1	stalkie_big_nohaplotig	exon	9648212	9648356	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 1832 1976 +
Chr1	stalkie_big_nohaplotig	exon	9651484	9651645	98	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 1670 1831 +
Chr1	stalkie_big_nohaplotig	exon	9652318	9652460	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 1527 1669 +
Chr1	stalkie_big_nohaplotig	exon	9652850	9652986	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 1390 1526 +
Chr1	stalkie_big_nohaplotig	exon	9654123	9654250	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 1262 1389 +
Chr1	stalkie_big_nohaplotig	exon	9660094	9660217	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 1138 1261 +
Chr1	stalkie_big_nohaplotig	exon	9660820	9660968	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 989 1137 +
Chr1	stalkie_big_nohaplotig	exon	9663176	9663263	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 901 988 +
Chr1	stalkie_big_nohaplotig	exon	9663694	9663784	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 810 900 +
Chr1	stalkie_big_nohaplotig	exon	9670286	9670451	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 644 809 +
Chr1	stalkie_big_nohaplotig	exon	9675463	9675652	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 454 643 +
Chr1	stalkie_big_nohaplotig	exon	9676067	9676143	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 377 453 +
Chr1	stalkie_big_nohaplotig	exon	9694623	9694681	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 318 376 +
Chr1	stalkie_big_nohaplotig	exon	9694807	9694928	100	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 196 317 +
Chr1	stalkie_big_nohaplotig	exon	9695561	9695700	99	-	.	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 56 195 +
Chr1	stalkie_big_nohaplotig	CDS	9634534	9634678	.	-	1	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 5667 5811 +
Chr1	stalkie_big_nohaplotig	CDS	9634825	9634993	.	-	2	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 5498 5666 +
Chr1	stalkie_big_nohaplotig	CDS	9635058	9635207	.	-	2	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 5348 5497 +
Chr1	stalkie_big_nohaplotig	CDS	9635616	9635688	.	-	0	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 5275 5347 +
Chr1	stalkie_big_nohaplotig	CDS	9635772	9636106	.	-	2	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 4940 5274 +
Chr1	stalkie_big_nohaplotig	CDS	9636161	9636307	.	-	2	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 4793 4939 +
Chr1	stalkie_big_nohaplotig	CDS	9636364	9636527	.	-	1	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 4629 4792 +
Chr1	stalkie_big_nohaplotig	CDS	9636585	9637471	.	-	0	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 3742 4628 +
Chr1	stalkie_big_nohaplotig	CDS	9637538	9637632	.	-	2	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 3647 3741 +
Chr1	stalkie_big_nohaplotig	CDS	9637698	9637850	.	-	2	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 3494 3646 +
Chr1	stalkie_big_nohaplotig	CDS	9639638	9639784	.	-	2	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 3347 3493 +
Chr1	stalkie_big_nohaplotig	CDS	9640088	9640585	.	-	2	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 2849 3346 +
Chr1	stalkie_big_nohaplotig	CDS	9640885	9641047	.	-	0	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 2686 2848 +
Chr1	stalkie_big_nohaplotig	CDS	9644118	9644235	.	-	1	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 2568 2685 +
Chr1	stalkie_big_nohaplotig	CDS	9647300	9647453	.	-	2	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 2414 2567 +
Chr1	stalkie_big_nohaplotig	CDS	9647613	9648049	.	-	1	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 1977 2413 +
Chr1	stalkie_big_nohaplotig	CDS	9648212	9648356	.	-	2	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 1832 1976 +
Chr1	stalkie_big_nohaplotig	CDS	9651484	9651645	.	-	2	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 1670 1831 +
Chr1	stalkie_big_nohaplotig	CDS	9652318	9652460	.	-	1	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 1527 1669 +
Chr1	stalkie_big_nohaplotig	CDS	9652850	9652986	.	-	0	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 1390 1526 +
Chr1	stalkie_big_nohaplotig	CDS	9654123	9654250	.	-	2	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 1262 1389 +
Chr1	stalkie_big_nohaplotig	CDS	9660094	9660217	.	-	0	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 1138 1261 +
Chr1	stalkie_big_nohaplotig	CDS	9660820	9660968	.	-	2	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 989 1137 +
Chr1	stalkie_big_nohaplotig	CDS	9663176	9663263	.	-	0	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 901 988 +
Chr1	stalkie_big_nohaplotig	CDS	9663694	9663784	.	-	1	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 810 900 +
Chr1	stalkie_big_nohaplotig	CDS	9670286	9670451	.	-	2	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 644 809 +
Chr1	stalkie_big_nohaplotig	CDS	9675463	9675652	.	-	0	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 454 643 +
Chr1	stalkie_big_nohaplotig	CDS	9676067	9676143	.	-	2	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 377 453 +
Chr1	stalkie_big_nohaplotig	CDS	9694623	9694681	.	-	1	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 318 376 +
Chr1	stalkie_big_nohaplotig	CDS	9694807	9694928	.	-	0	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 196 317 +
Chr1	stalkie_big_nohaplotig	CDS	9695561	9695698	.	-	0	Parent=FBgn0263219.1.mrna1;Target=FBgn0263219.1 58 195 +
Chr1	gffcl	locus	9770903	9771689	.	+	.	ID=RLOC_00005602;geneIDs=comp148142_c0_seq1.path1;transcripts=comp148142_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9770903	9771689	.	+	.	ID=comp148142_c0_seq1.mrna1;geneID=comp148142_c0_seq1.path1;Name=comp148142_c0_seq1;Dir=antisensecoverage=93.3;identity=98.4;matches=662;mismatches=2;indels=9;unknowns=0;Target=comp148142_c0_seq1 438 719 .;locus=RLOC_00005602
Chr1	stalkie_big_nohaplotig	exon	9770903	9771199	98	+	.	Parent=comp148142_c0_seq1.mrna1;Target=comp148142_c0_seq1 425 719 -
Chr1	stalkie_big_nohaplotig	exon	9771321	9771689	98	+	.	Parent=comp148142_c0_seq1.mrna1;Target=comp148142_c0_seq1 49 424 -
Chr1	stalkie_big_nohaplotig	CDS	9770903	9771186	.	+	0	Parent=comp148142_c0_seq1.mrna1
Chr1	gffcl	locus	9840119	9841327	.	-	.	ID=RLOC_00005603;geneIDs=FBgn0035854.1.path1;transcripts=FBgn0035854.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9840119	9841327	.	-	.	ID=FBgn0035854.1.mrna1;geneID=FBgn0035854.1.path1;Name=FBgn0035854.1;Dir=sensecoverage=100.0;identity=99.4;matches=1077;mismatches=6;indels=0;unknowns=0;locus=RLOC_00005603
Chr1	stalkie_big_nohaplotig	exon	9840119	9840759	99	-	.	Parent=FBgn0035854.1.mrna1;Target=FBgn0035854.1 443 1083 +
Chr1	stalkie_big_nohaplotig	exon	9840826	9841063	99	-	.	Parent=FBgn0035854.1.mrna1;Target=FBgn0035854.1 205 442 +
Chr1	stalkie_big_nohaplotig	exon	9841124	9841327	99	-	.	Parent=FBgn0035854.1.mrna1;Target=FBgn0035854.1 1 204 +
Chr1	stalkie_big_nohaplotig	CDS	9840119	9840759	.	-	2	Parent=FBgn0035854.1.mrna1;Target=FBgn0035854.1 443 1083 +
Chr1	stalkie_big_nohaplotig	CDS	9840826	9841063	.	-	0	Parent=FBgn0035854.1.mrna1;Target=FBgn0035854.1 205 442 +
Chr1	stalkie_big_nohaplotig	CDS	9841124	9841327	.	-	0	Parent=FBgn0035854.1.mrna1;Target=FBgn0035854.1 1 204 +
Chr1	gffcl	locus	9843747	9845475	.	+	.	ID=RLOC_00005604;geneIDs=FBgn0035853.1.path1;transcripts=FBgn0035853.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9843747	9845475	.	+	.	ID=FBgn0035853.1.mrna1;geneID=FBgn0035853.1.path1;Name=FBgn0035853.1;Dir=sensecoverage=100.0;identity=99.6;matches=556;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005604
Chr1	stalkie_big_nohaplotig	exon	9843747	9843864	100	+	.	Parent=FBgn0035853.1.mrna1;Target=FBgn0035853.1 1 118 +
Chr1	stalkie_big_nohaplotig	exon	9844978	9845279	99	+	.	Parent=FBgn0035853.1.mrna1;Target=FBgn0035853.1 119 420 +
Chr1	stalkie_big_nohaplotig	exon	9845338	9845475	100	+	.	Parent=FBgn0035853.1.mrna1;Target=FBgn0035853.1 421 558 +
Chr1	stalkie_big_nohaplotig	CDS	9843747	9843864	.	+	0	Parent=FBgn0035853.1.mrna1;Target=FBgn0035853.1 1 118 +
Chr1	stalkie_big_nohaplotig	CDS	9844978	9845279	.	+	2	Parent=FBgn0035853.1.mrna1;Target=FBgn0035853.1 119 420 +
Chr1	stalkie_big_nohaplotig	CDS	9845338	9845475	.	+	0	Parent=FBgn0035853.1.mrna1;Target=FBgn0035853.1 421 558 +
Chr1	gffcl	locus	9846145	9855338	.	-	.	ID=RLOC_00005605;geneIDs=FBgn0035851.1.path1;transcripts=FBgn0035851.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9846145	9855338	.	-	.	ID=FBgn0035851.1.mrna1;geneID=FBgn0035851.1.path1;Name=FBgn0035851.1;Dir=sensecoverage=100.0;identity=99.8;matches=3009;mismatches=6;indels=0;unknowns=0;locus=RLOC_00005605
Chr1	stalkie_big_nohaplotig	exon	9846145	9846247	100	-	.	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 2913 3015 +
Chr1	stalkie_big_nohaplotig	exon	9846324	9846824	100	-	.	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 2412 2912 +
Chr1	stalkie_big_nohaplotig	exon	9846903	9847015	100	-	.	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 2299 2411 +
Chr1	stalkie_big_nohaplotig	exon	9848809	9849168	99	-	.	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 1939 2298 +
Chr1	stalkie_big_nohaplotig	exon	9849237	9849426	100	-	.	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 1749 1938 +
Chr1	stalkie_big_nohaplotig	exon	9849503	9849672	100	-	.	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 1579 1748 +
Chr1	stalkie_big_nohaplotig	exon	9849739	9849935	100	-	.	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 1382 1578 +
Chr1	stalkie_big_nohaplotig	exon	9849998	9850161	99	-	.	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 1218 1381 +
Chr1	stalkie_big_nohaplotig	exon	9850217	9850409	100	-	.	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 1025 1217 +
Chr1	stalkie_big_nohaplotig	exon	9851304	9851834	100	-	.	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 494 1024 +
Chr1	stalkie_big_nohaplotig	exon	9851896	9852011	100	-	.	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 378 493 +
Chr1	stalkie_big_nohaplotig	exon	9852072	9852229	98	-	.	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 220 377 +
Chr1	stalkie_big_nohaplotig	exon	9852300	9852386	100	-	.	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 133 219 +
Chr1	stalkie_big_nohaplotig	exon	9855207	9855338	99	-	.	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 1 132 +
Chr1	stalkie_big_nohaplotig	CDS	9846145	9846247	.	-	1	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 2913 3015 +
Chr1	stalkie_big_nohaplotig	CDS	9846324	9846824	.	-	1	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 2412 2912 +
Chr1	stalkie_big_nohaplotig	CDS	9846903	9847015	.	-	0	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 2299 2411 +
Chr1	stalkie_big_nohaplotig	CDS	9848809	9849168	.	-	0	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 1939 2298 +
Chr1	stalkie_big_nohaplotig	CDS	9849237	9849426	.	-	1	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 1749 1938 +
Chr1	stalkie_big_nohaplotig	CDS	9849503	9849672	.	-	0	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 1579 1748 +
Chr1	stalkie_big_nohaplotig	CDS	9849739	9849935	.	-	2	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 1382 1578 +
Chr1	stalkie_big_nohaplotig	CDS	9849998	9850161	.	-	1	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 1218 1381 +
Chr1	stalkie_big_nohaplotig	CDS	9850217	9850409	.	-	2	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 1025 1217 +
Chr1	stalkie_big_nohaplotig	CDS	9851304	9851834	.	-	2	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 494 1024 +
Chr1	stalkie_big_nohaplotig	CDS	9851896	9852011	.	-	1	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 378 493 +
Chr1	stalkie_big_nohaplotig	CDS	9852072	9852229	.	-	0	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 220 377 +
Chr1	stalkie_big_nohaplotig	CDS	9852300	9852386	.	-	0	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 133 219 +
Chr1	stalkie_big_nohaplotig	CDS	9855207	9855329	.	-	0	Parent=FBgn0035851.1.mrna1;Target=FBgn0035851.1 10 132 +
Chr1	gffcl	locus	9853659	9855020	.	+	.	ID=RLOC_00005606;geneIDs=FBgn0035852.1.path1;transcripts=FBgn0035852.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9853659	9855020	.	+	.	ID=FBgn0035852.1.mrna1;geneID=FBgn0035852.1.path1;Name=FBgn0035852.1;Dir=sensecoverage=100.0;identity=99.8;matches=1215;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005606
Chr1	stalkie_big_nohaplotig	exon	9853659	9854157	100	+	.	Parent=FBgn0035852.1.mrna1;Target=FBgn0035852.1 1 499 +
Chr1	stalkie_big_nohaplotig	exon	9854302	9855020	99	+	.	Parent=FBgn0035852.1.mrna1;Target=FBgn0035852.1 500 1218 +
Chr1	stalkie_big_nohaplotig	CDS	9853659	9854157	.	+	0	Parent=FBgn0035852.1.mrna1;Target=FBgn0035852.1 1 499 +
Chr1	stalkie_big_nohaplotig	CDS	9854302	9855020	.	+	2	Parent=FBgn0035852.1.mrna1;Target=FBgn0035852.1 500 1218 +
Chr1	gffcl	locus	9859057	9862535	.	-	.	ID=RLOC_00005607;geneIDs=FBgn0035850.1.path1;transcripts=FBgn0035850.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9859057	9862535	.	-	.	ID=FBgn0035850.1.mrna1;geneID=FBgn0035850.1.path1;Name=FBgn0035850.1;Dir=sensecoverage=100.0;identity=100.0;matches=1236;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005607
Chr1	stalkie_big_nohaplotig	exon	9859057	9859166	100	-	.	Parent=FBgn0035850.1.mrna1;Target=FBgn0035850.1 1127 1236 +
Chr1	stalkie_big_nohaplotig	exon	9859266	9859393	100	-	.	Parent=FBgn0035850.1.mrna1;Target=FBgn0035850.1 999 1126 +
Chr1	stalkie_big_nohaplotig	exon	9860882	9861040	100	-	.	Parent=FBgn0035850.1.mrna1;Target=FBgn0035850.1 840 998 +
Chr1	stalkie_big_nohaplotig	exon	9861366	9861949	100	-	.	Parent=FBgn0035850.1.mrna1;Target=FBgn0035850.1 256 839 +
Chr1	stalkie_big_nohaplotig	exon	9862025	9862196	100	-	.	Parent=FBgn0035850.1.mrna1;Target=FBgn0035850.1 84 255 +
Chr1	stalkie_big_nohaplotig	exon	9862453	9862535	100	-	.	Parent=FBgn0035850.1.mrna1;Target=FBgn0035850.1 1 83 +
Chr1	stalkie_big_nohaplotig	CDS	9859057	9859166	.	-	2	Parent=FBgn0035850.1.mrna1;Target=FBgn0035850.1 1127 1236 +
Chr1	stalkie_big_nohaplotig	CDS	9859266	9859393	.	-	1	Parent=FBgn0035850.1.mrna1;Target=FBgn0035850.1 999 1126 +
Chr1	stalkie_big_nohaplotig	CDS	9860882	9861040	.	-	1	Parent=FBgn0035850.1.mrna1;Target=FBgn0035850.1 840 998 +
Chr1	stalkie_big_nohaplotig	CDS	9861366	9861949	.	-	0	Parent=FBgn0035850.1.mrna1;Target=FBgn0035850.1 256 839 +
Chr1	stalkie_big_nohaplotig	CDS	9862025	9862196	.	-	1	Parent=FBgn0035850.1.mrna1;Target=FBgn0035850.1 84 255 +
Chr1	stalkie_big_nohaplotig	CDS	9862453	9862535	.	-	0	Parent=FBgn0035850.1.mrna1;Target=FBgn0035850.1 1 83 +
Chr1	gffcl	locus	9866988	9868097	.	-	.	ID=RLOC_00005608;geneIDs=FBgn0028992.1.path1;transcripts=FBgn0028992.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9866988	9868097	.	-	.	ID=FBgn0028992.1.mrna1;geneID=FBgn0028992.1.path1;Name=FBgn0028992.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1105;mismatches=5;indels=0;unknowns=0;Target=FBgn0028992.1 1110 1 .;locus=RLOC_00005608
Chr1	stalkie_big_nohaplotig	exon	9866988	9868097	99	-	.	Parent=FBgn0028992.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9866988	9868097	.	-	0	Parent=FBgn0028992.1.mrna1
Chr1	gffcl	locus	9868586	9938765	.	-	.	ID=RLOC_00005609;geneIDs=comp149331_c0_seq1.path1;transcripts=comp149331_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9868586	9938765	.	-	.	ID=comp149331_c0_seq1.mrna1;geneID=comp149331_c0_seq1.path1;Name=comp149331_c0_seq1;Dir=indeterminatecoverage=82.6;identity=96.8;matches=424;mismatches=13;indels=1;unknowns=0;Target=comp149331_c0_seq1 433 281 .;locus=RLOC_00005609
Chr1	stalkie_big_nohaplotig	exon	9868586	9868927	97	-	.	Parent=comp149331_c0_seq1.mrna1;Target=comp149331_c0_seq1 530 190 .
Chr1	stalkie_big_nohaplotig	exon	9870657	9870670	100	-	.	Parent=comp149331_c0_seq1.mrna1;Target=comp149331_c0_seq1 189 176 .
Chr1	stalkie_big_nohaplotig	exon	9874828	9874837	100	-	.	Parent=comp149331_c0_seq1.mrna1;Target=comp149331_c0_seq1 175 166 .
Chr1	stalkie_big_nohaplotig	exon	9880600	9880601	100	-	.	Parent=comp149331_c0_seq1.mrna1;Target=comp149331_c0_seq1 165 164 .
Chr1	stalkie_big_nohaplotig	exon	9888692	9888696	100	-	.	Parent=comp149331_c0_seq1.mrna1;Target=comp149331_c0_seq1 163 159 .
Chr1	stalkie_big_nohaplotig	exon	9892510	9892511	100	-	.	Parent=comp149331_c0_seq1.mrna1;Target=comp149331_c0_seq1 158 157 .
Chr1	stalkie_big_nohaplotig	exon	9900600	9900601	100	-	.	Parent=comp149331_c0_seq1.mrna1;Target=comp149331_c0_seq1 156 155 .
Chr1	stalkie_big_nohaplotig	exon	9908430	9908434	100	-	.	Parent=comp149331_c0_seq1.mrna1;Target=comp149331_c0_seq1 154 150 .
Chr1	stalkie_big_nohaplotig	exon	9911668	9911671	100	-	.	Parent=comp149331_c0_seq1.mrna1;Target=comp149331_c0_seq1 148 145 .
Chr1	stalkie_big_nohaplotig	exon	9916136	9916143	100	-	.	Parent=comp149331_c0_seq1.mrna1;Target=comp149331_c0_seq1 144 137 .
Chr1	stalkie_big_nohaplotig	exon	9916508	9916511	100	-	.	Parent=comp149331_c0_seq1.mrna1;Target=comp149331_c0_seq1 136 133 .
Chr1	stalkie_big_nohaplotig	exon	9921820	9921823	100	-	.	Parent=comp149331_c0_seq1.mrna1;Target=comp149331_c0_seq1 132 129 .
Chr1	stalkie_big_nohaplotig	exon	9929597	9929607	90	-	.	Parent=comp149331_c0_seq1.mrna1;Target=comp149331_c0_seq1 128 118 .
Chr1	stalkie_big_nohaplotig	exon	9930325	9930340	75	-	.	Parent=comp149331_c0_seq1.mrna1;Target=comp149331_c0_seq1 117 102 .
Chr1	stalkie_big_nohaplotig	exon	9937466	9937468	100	-	.	Parent=comp149331_c0_seq1.mrna1;Target=comp149331_c0_seq1 101 99 .
Chr1	stalkie_big_nohaplotig	exon	9938760	9938765	100	-	.	Parent=comp149331_c0_seq1.mrna1;Target=comp149331_c0_seq1 98 93 .
Chr1	stalkie_big_nohaplotig	CDS	9868684	9868836	.	-	0	Parent=comp149331_c0_seq1.mrna1
Chr1	gffcl	locus	9880620	9883112	.	-	.	ID=RLOC_00005611;geneIDs=FBgn0035848.1.path1;transcripts=FBgn0035848.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9880620	9883112	.	-	.	ID=FBgn0035848.1.mrna1;geneID=FBgn0035848.1.path1;Name=FBgn0035848.1;Dir=sensecoverage=100.0;identity=99.6;matches=1476;mismatches=6;indels=0;unknowns=0;locus=RLOC_00005611
Chr1	stalkie_big_nohaplotig	exon	9880620	9881159	99	-	.	Parent=FBgn0035848.1.mrna1;Target=FBgn0035848.1 943 1482 +
Chr1	stalkie_big_nohaplotig	exon	9882104	9883005	99	-	.	Parent=FBgn0035848.1.mrna1;Target=FBgn0035848.1 41 942 +
Chr1	stalkie_big_nohaplotig	exon	9883073	9883112	100	-	.	Parent=FBgn0035848.1.mrna1;Target=FBgn0035848.1 1 40 +
Chr1	stalkie_big_nohaplotig	CDS	9880620	9881159	.	-	0	Parent=FBgn0035848.1.mrna1;Target=FBgn0035848.1 943 1482 +
Chr1	stalkie_big_nohaplotig	CDS	9882104	9883005	.	-	2	Parent=FBgn0035848.1.mrna1;Target=FBgn0035848.1 41 942 +
Chr1	stalkie_big_nohaplotig	CDS	9883073	9883112	.	-	0	Parent=FBgn0035848.1.mrna1;Target=FBgn0035848.1 1 40 +
Chr1	gffcl	locus	9886548	9888425	.	+	.	ID=RLOC_00005612;geneIDs=FBgn0020392.1.path1;transcripts=FBgn0020392.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9886548	9888425	.	+	.	ID=FBgn0020392.1.mrna1;geneID=FBgn0020392.1.path1;Name=FBgn0020392.1;Dir=sensecoverage=100.0;identity=99.2;matches=1431;mismatches=12;indels=0;unknowns=0;locus=RLOC_00005612
Chr1	stalkie_big_nohaplotig	exon	9886548	9886773	97	+	.	Parent=FBgn0020392.1.mrna1;Target=FBgn0020392.1 1 226 +
Chr1	stalkie_big_nohaplotig	exon	9887146	9887798	99	+	.	Parent=FBgn0020392.1.mrna1;Target=FBgn0020392.1 227 879 +
Chr1	stalkie_big_nohaplotig	exon	9887862	9888425	98	+	.	Parent=FBgn0020392.1.mrna1;Target=FBgn0020392.1 880 1443 +
Chr1	stalkie_big_nohaplotig	CDS	9886548	9886773	.	+	0	Parent=FBgn0020392.1.mrna1;Target=FBgn0020392.1 1 226 +
Chr1	stalkie_big_nohaplotig	CDS	9887146	9887798	.	+	2	Parent=FBgn0020392.1.mrna1;Target=FBgn0020392.1 227 879 +
Chr1	stalkie_big_nohaplotig	CDS	9887862	9888425	.	+	0	Parent=FBgn0020392.1.mrna1;Target=FBgn0020392.1 880 1443 +
Chr1	gffcl	locus	9890710	9897196	.	+	.	ID=RLOC_00005613;geneIDs=FBgn0040290.1.path1;transcripts=FBgn0040290.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9890710	9897196	.	+	.	ID=FBgn0040290.1.mrna1;geneID=FBgn0040290.1.path1;Name=FBgn0040290.1;Dir=sensecoverage=100.0;identity=98.8;matches=4867;mismatches=53;indels=6;unknowns=0;locus=RLOC_00005613
Chr1	stalkie_big_nohaplotig	exon	9890710	9890898	98	+	.	Parent=FBgn0040290.1.mrna1;Target=FBgn0040290.1 1 189 +
Chr1	stalkie_big_nohaplotig	exon	9890954	9891614	99	+	.	Parent=FBgn0040290.1.mrna1;Target=FBgn0040290.1 190 850 +
Chr1	stalkie_big_nohaplotig	exon	9891674	9893650	98	+	.	Parent=FBgn0040290.1.mrna1;Target=FBgn0040290.1 851 2821 +
Chr1	stalkie_big_nohaplotig	exon	9893731	9894382	99	+	.	Parent=FBgn0040290.1.mrna1;Target=FBgn0040290.1 2822 3473 +
Chr1	stalkie_big_nohaplotig	exon	9894444	9894531	100	+	.	Parent=FBgn0040290.1.mrna1;Target=FBgn0040290.1 3474 3561 +
Chr1	stalkie_big_nohaplotig	exon	9895526	9895947	99	+	.	Parent=FBgn0040290.1.mrna1;Target=FBgn0040290.1 3562 3983 +
Chr1	stalkie_big_nohaplotig	exon	9896007	9896219	96	+	.	Parent=FBgn0040290.1.mrna1;Target=FBgn0040290.1 3984 4196 +
Chr1	stalkie_big_nohaplotig	exon	9896276	9896451	98	+	.	Parent=FBgn0040290.1.mrna1;Target=FBgn0040290.1 4197 4372 +
Chr1	stalkie_big_nohaplotig	exon	9896524	9896681	99	+	.	Parent=FBgn0040290.1.mrna1;Target=FBgn0040290.1 4373 4530 +
Chr1	stalkie_big_nohaplotig	exon	9896744	9896902	98	+	.	Parent=FBgn0040290.1.mrna1;Target=FBgn0040290.1 4531 4689 +
Chr1	stalkie_big_nohaplotig	exon	9896966	9897196	99	+	.	Parent=FBgn0040290.1.mrna1;Target=FBgn0040290.1 4690 4920 +
Chr1	stalkie_big_nohaplotig	CDS	9890710	9890898	.	+	0	Parent=FBgn0040290.1.mrna1;Target=FBgn0040290.1 1 189 +
Chr1	stalkie_big_nohaplotig	CDS	9890954	9891614	.	+	0	Parent=FBgn0040290.1.mrna1;Target=FBgn0040290.1 190 850 +
Chr1	stalkie_big_nohaplotig	CDS	9891674	9893650	.	+	2	Parent=FBgn0040290.1.mrna1;Target=FBgn0040290.1 851 2821 +
Chr1	stalkie_big_nohaplotig	CDS	9893731	9894382	.	+	2	Parent=FBgn0040290.1.mrna1;Target=FBgn0040290.1 2822 3473 +
Chr1	stalkie_big_nohaplotig	CDS	9894444	9894531	.	+	1	Parent=FBgn0040290.1.mrna1;Target=FBgn0040290.1 3474 3561 +
Chr1	stalkie_big_nohaplotig	CDS	9895526	9895947	.	+	0	Parent=FBgn0040290.1.mrna1;Target=FBgn0040290.1 3562 3983 +
Chr1	stalkie_big_nohaplotig	CDS	9896007	9896219	.	+	1	Parent=FBgn0040290.1.mrna1;Target=FBgn0040290.1 3984 4196 +
Chr1	stalkie_big_nohaplotig	CDS	9896276	9896451	.	+	1	Parent=FBgn0040290.1.mrna1;Target=FBgn0040290.1 4197 4372 +
Chr1	stalkie_big_nohaplotig	CDS	9896524	9896681	.	+	2	Parent=FBgn0040290.1.mrna1;Target=FBgn0040290.1 4373 4530 +
Chr1	stalkie_big_nohaplotig	CDS	9896744	9896902	.	+	0	Parent=FBgn0040290.1.mrna1;Target=FBgn0040290.1 4531 4689 +
Chr1	stalkie_big_nohaplotig	CDS	9896966	9897196	.	+	0	Parent=FBgn0040290.1.mrna1;Target=FBgn0040290.1 4690 4920 +
Chr1	gffcl	locus	9934832	9937208	.	-	.	ID=RLOC_00005615;geneIDs=ORF252.path1;transcripts=ORF252.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9934832	9937208	.	-	.	ID=ORF252.mrna1;geneID=ORF252.path1;Name=ORF252;Dir=sensecoverage=100.0;identity=99.6;matches=2238;mismatches=9;indels=0;unknowns=0;locus=RLOC_00005615
Chr1	stalkie_big_nohaplotig	exon	9934832	9935827	99	-	.	Parent=ORF252.mrna1;Target=ORF252 1252 2247 +
Chr1	stalkie_big_nohaplotig	exon	9935893	9936048	100	-	.	Parent=ORF252.mrna1;Target=ORF252 1096 1251 +
Chr1	stalkie_big_nohaplotig	exon	9936114	9937208	99	-	.	Parent=ORF252.mrna1;Target=ORF252 1 1095 +
Chr1	stalkie_big_nohaplotig	CDS	9934832	9935827	.	-	0	Parent=ORF252.mrna1;Target=ORF252 1252 2247 +
Chr1	stalkie_big_nohaplotig	CDS	9935893	9936048	.	-	0	Parent=ORF252.mrna1;Target=ORF252 1096 1251 +
Chr1	stalkie_big_nohaplotig	CDS	9936114	9937208	.	-	0	Parent=ORF252.mrna1;Target=ORF252 1 1095 +
Chr1	gffcl	locus	9945052	9945636	.	-	.	ID=RLOC_00005616;geneIDs=FBgn0035435.1.path1;transcripts=FBgn0035435.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9945052	9945636	.	-	.	ID=FBgn0035435.1.mrna1;geneID=FBgn0035435.1.path1;Name=FBgn0035435.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=581;mismatches=4;indels=0;unknowns=0;Target=FBgn0035435.1 585 1 .;locus=RLOC_00005616
Chr1	stalkie_big_nohaplotig	exon	9945052	9945636	99	-	.	Parent=FBgn0035435.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9945052	9945636	.	-	0	Parent=FBgn0035435.1.mrna1
Chr1	gffcl	locus	9948934	9950966	.	+	.	ID=RLOC_00005617;geneIDs=FBgn0035498.1.path1;transcripts=FBgn0035498.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9948934	9950966	.	+	.	ID=FBgn0035498.1.mrna1;geneID=FBgn0035498.1.path1;Name=FBgn0035498.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=2027;mismatches=6;indels=1;unknowns=0;Target=FBgn0035498.1 2034 1 .;locus=RLOC_00005617
Chr1	stalkie_big_nohaplotig	exon	9948934	9950966	99	+	.	Parent=FBgn0035498.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9948934	9950966	.	+	0	Parent=FBgn0035498.1.mrna1
Chr1	gffcl	locus	9953180	9954748	.	+	.	ID=RLOC_00005618;geneIDs=FBgn0028402.1.path1;transcripts=FBgn0028402.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9953180	9954748	.	+	.	ID=FBgn0028402.1.mrna1;geneID=FBgn0028402.1.path1;Name=FBgn0028402.1;Dir=sensecoverage=100.0;identity=99.0;matches=1378;mismatches=14;indels=0;unknowns=0;locus=RLOC_00005618
Chr1	stalkie_big_nohaplotig	exon	9953180	9953251	98	+	.	Parent=FBgn0028402.1.mrna1;Target=FBgn0028402.1 1 72 +
Chr1	stalkie_big_nohaplotig	exon	9953311	9954118	99	+	.	Parent=FBgn0028402.1.mrna1;Target=FBgn0028402.1 73 880 +
Chr1	stalkie_big_nohaplotig	exon	9954173	9954387	99	+	.	Parent=FBgn0028402.1.mrna1;Target=FBgn0028402.1 881 1095 +
Chr1	stalkie_big_nohaplotig	exon	9954452	9954748	98	+	.	Parent=FBgn0028402.1.mrna1;Target=FBgn0028402.1 1096 1392 +
Chr1	stalkie_big_nohaplotig	CDS	9953180	9953251	.	+	0	Parent=FBgn0028402.1.mrna1;Target=FBgn0028402.1 1 72 +
Chr1	stalkie_big_nohaplotig	CDS	9953311	9954118	.	+	0	Parent=FBgn0028402.1.mrna1;Target=FBgn0028402.1 73 880 +
Chr1	stalkie_big_nohaplotig	CDS	9954173	9954387	.	+	2	Parent=FBgn0028402.1.mrna1;Target=FBgn0028402.1 881 1095 +
Chr1	stalkie_big_nohaplotig	CDS	9954452	9954748	.	+	0	Parent=FBgn0028402.1.mrna1;Target=FBgn0028402.1 1096 1392 +
Chr1	gffcl	locus	9955231	9958235	.	-	.	ID=RLOC_00005619;geneIDs=FBgn0036689.1.path1;transcripts=FBgn0036689.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9955231	9958235	.	-	.	ID=FBgn0036689.1.mrna1;geneID=FBgn0036689.1.path1;Name=FBgn0036689.1;Dir=sensecoverage=98.6;identity=98.5;matches=1410;mismatches=21;indels=1;unknowns=0;locus=RLOC_00005619
Chr1	stalkie_big_nohaplotig	exon	9955231	9955814	98	-	.	Parent=FBgn0036689.1.mrna1;Target=FBgn0036689.1 849 1432 +
Chr1	stalkie_big_nohaplotig	exon	9955898	9956055	100	-	.	Parent=FBgn0036689.1.mrna1;Target=FBgn0036689.1 691 848 +
Chr1	stalkie_big_nohaplotig	exon	9957347	9957433	97	-	.	Parent=FBgn0036689.1.mrna1;Target=FBgn0036689.1 604 690 +
Chr1	stalkie_big_nohaplotig	exon	9957514	9957879	97	-	.	Parent=FBgn0036689.1.mrna1;Target=FBgn0036689.1 238 603 +
Chr1	stalkie_big_nohaplotig	exon	9957935	9958092	100	-	.	Parent=FBgn0036689.1.mrna1;Target=FBgn0036689.1 80 237 +
Chr1	stalkie_big_nohaplotig	exon	9958158	9958235	97	-	.	Parent=FBgn0036689.1.mrna1;Target=FBgn0036689.1 1 79 +
Chr1	stalkie_big_nohaplotig	CDS	9958089	9958092	.	-	2	Parent=FBgn0036689.1.mrna1;Target=FBgn0036689.1 80 83 +
Chr1	stalkie_big_nohaplotig	CDS	9958158	9958233	.	-	0	Parent=FBgn0036689.1.mrna1;Target=FBgn0036689.1 3 79 +
Chr1	gffcl	locus	9958264	9958760	.	-	.	ID=RLOC_00005620;geneIDs=comp154078_c0_seq1.path1;transcripts=comp154078_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9958264	9958760	.	-	.	ID=comp154078_c0_seq1.mrna1;geneID=comp154078_c0_seq1.path1;Name=comp154078_c0_seq1;Dir=sensecoverage=100.0;identity=97.1;matches=428;mismatches=11;indels=2;unknowns=0;Target=comp154078_c0_seq1 3 140 +;locus=RLOC_00005620
Chr1	stalkie_big_nohaplotig	exon	9958264	9958286	100	-	.	Parent=comp154078_c0_seq1.mrna1;Target=comp154078_c0_seq1 419 441 +
Chr1	stalkie_big_nohaplotig	exon	9958345	9958760	96	-	.	Parent=comp154078_c0_seq1.mrna1;Target=comp154078_c0_seq1 1 418 +
Chr1	stalkie_big_nohaplotig	CDS	9958621	9958758	.	-	0	Parent=comp154078_c0_seq1.mrna1
Chr1	gffcl	locus	9962442	9967651	.	+	.	ID=RLOC_00005621;geneIDs=FBgn0261872.path1;transcripts=FBgn0261872.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9962442	9967651	.	+	.	ID=FBgn0261872.mrna1;geneID=FBgn0261872.path1;Name=FBgn0261872;Dir=sensecoverage=92.9;identity=99.7;matches=930;mismatches=3;indels=0;unknowns=15;locus=RLOC_00005621
Chr1	stalkie_big_nohaplotig	exon	9962442	9962609	98	+	.	Parent=FBgn0261872.mrna1;Target=FBgn0261872 1 168 +
Chr1	stalkie_big_nohaplotig	exon	9965132	9965294	100	+	.	Parent=FBgn0261872.mrna1;Target=FBgn0261872 169 331 +
Chr1	stalkie_big_nohaplotig	exon	9965495	9965567	100	+	.	Parent=FBgn0261872.mrna1;Target=FBgn0261872 332 404 +
Chr1	stalkie_big_nohaplotig	exon	9965921	9965995	100	+	.	Parent=FBgn0261872.mrna1;Target=FBgn0261872 405 479 +
Chr1	stalkie_big_nohaplotig	exon	9967010	9967086	100	+	.	Parent=FBgn0261872.mrna1;Target=FBgn0261872 480 556 +
Chr1	stalkie_big_nohaplotig	exon	9967160	9967358	100	+	.	Parent=FBgn0261872.mrna1;Target=FBgn0261872 557 755 +
Chr1	stalkie_big_nohaplotig	exon	9967459	9967651	100	+	.	Parent=FBgn0261872.mrna1;Target=FBgn0261872 756 948 +
Chr1	stalkie_big_nohaplotig	CDS	9962442	9962609	.	+	0	Parent=FBgn0261872.mrna1;Target=FBgn0261872 1 168 +
Chr1	stalkie_big_nohaplotig	CDS	9965132	9965294	.	+	0	Parent=FBgn0261872.mrna1;Target=FBgn0261872 169 331 +
Chr1	stalkie_big_nohaplotig	CDS	9965495	9965567	.	+	2	Parent=FBgn0261872.mrna1;Target=FBgn0261872 332 404 +
Chr1	stalkie_big_nohaplotig	CDS	9965921	9965995	.	+	1	Parent=FBgn0261872.mrna1;Target=FBgn0261872 405 479 +
Chr1	stalkie_big_nohaplotig	CDS	9967010	9967086	.	+	1	Parent=FBgn0261872.mrna1;Target=FBgn0261872 480 556 +
Chr1	stalkie_big_nohaplotig	CDS	9967160	9967358	.	+	2	Parent=FBgn0261872.mrna1;Target=FBgn0261872 557 755 +
Chr1	stalkie_big_nohaplotig	CDS	9967459	9967651	.	+	1	Parent=FBgn0261872.mrna1;Target=FBgn0261872 756 948 +
Chr1	gffcl	locus	9963820	9964948	.	+	.	ID=RLOC_00005622;geneIDs=comp158654_c0_seq1.path1;transcripts=comp158654_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9963820	9964948	.	+	.	ID=comp158654_c0_seq1.mrna1;geneID=comp158654_c0_seq1.path1;Name=comp158654_c0_seq1;Dir=indeterminatecoverage=99.9;identity=94.3;matches=1076;mismatches=53;indels=12;unknowns=0;Target=comp158654_c0_seq1 1141 1 .;CDS_Target=comp158654_c0_seq1 123 1 .;locus=RLOC_00005622
Chr1	stalkie_big_nohaplotig	exon	9963820	9964948	94	+	.	Parent=comp158654_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9963820	9963942	.	+	0	Parent=comp158654_c0_seq1.mrna1
Chr1	gffcl	locus	9966230	9966536	.	-	.	ID=RLOC_00005623;geneIDs=comp156022_c0_seq1.path1;transcripts=comp156022_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9966230	9966536	.	-	.	ID=comp156022_c0_seq1.mrna1;geneID=comp156022_c0_seq1.path1;Name=comp156022_c0_seq1;Dir=indeterminatecoverage=63.6;identity=96.1;matches=298;mismatches=6;indels=6;unknowns=0;Target=comp156022_c0_seq1 307 1 .;CDS_Target=comp156022_c0_seq1 258 208 .;locus=RLOC_00005623
Chr1	stalkie_big_nohaplotig	exon	9966230	9966536	96	-	.	Parent=comp156022_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9966279	9966329	.	-	0	Parent=comp156022_c0_seq1.mrna1
Chr1	gffcl	locus	9967692	9971269	.	+	.	ID=RLOC_00005624;geneIDs=comp161861_c2_seq1.path1;transcripts=comp161861_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9967692	9971269	.	+	.	ID=comp161861_c2_seq1.mrna1;geneID=comp161861_c2_seq1.path1;Name=comp161861_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=3005;mismatches=22;indels=1;unknowns=0;Target=comp161861_c2_seq1 110 3 .;locus=RLOC_00005624
Chr1	stalkie_big_nohaplotig	exon	9967692	9968535	99	+	.	Parent=comp161861_c2_seq1.mrna1;Target=comp161861_c2_seq1 845 1 .
Chr1	stalkie_big_nohaplotig	exon	9968597	9968764	97	+	.	Parent=comp161861_c2_seq1.mrna1;Target=comp161861_c2_seq1 1013 846 .
Chr1	stalkie_big_nohaplotig	exon	9969018	9969299	98	+	.	Parent=comp161861_c2_seq1.mrna1;Target=comp161861_c2_seq1 1295 1014 .
Chr1	stalkie_big_nohaplotig	exon	9969360	9969528	99	+	.	Parent=comp161861_c2_seq1.mrna1;Target=comp161861_c2_seq1 1464 1296 .
Chr1	stalkie_big_nohaplotig	exon	9969590	9970066	99	+	.	Parent=comp161861_c2_seq1.mrna1;Target=comp161861_c2_seq1 1941 1465 .
Chr1	stalkie_big_nohaplotig	exon	9970125	9970494	100	+	.	Parent=comp161861_c2_seq1.mrna1;Target=comp161861_c2_seq1 2311 1942 .
Chr1	stalkie_big_nohaplotig	exon	9970553	9971269	98	+	.	Parent=comp161861_c2_seq1.mrna1;Target=comp161861_c2_seq1 3028 2312 .
Chr1	stalkie_big_nohaplotig	CDS	9967694	9967800	.	+	0	Parent=comp161861_c2_seq1.mrna1
Chr1	gffcl	locus	9969900	9971173	.	-	.	ID=RLOC_00005625;geneIDs=FBgn0036691.1.path1;transcripts=FBgn0036691.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9969900	9971173	.	-	.	ID=FBgn0036691.1.mrna1;geneID=FBgn0036691.1.path1;Name=FBgn0036691.1;Dir=sensecoverage=100.0;identity=99.3;matches=1150;mismatches=8;indels=0;unknowns=0;locus=RLOC_00005625
Chr1	stalkie_big_nohaplotig	exon	9969900	9970064	100	-	.	Parent=FBgn0036691.1.mrna1;Target=FBgn0036691.1 994 1158 +
Chr1	stalkie_big_nohaplotig	exon	9970123	9970494	100	-	.	Parent=FBgn0036691.1.mrna1;Target=FBgn0036691.1 622 993 +
Chr1	stalkie_big_nohaplotig	exon	9970553	9971173	98	-	.	Parent=FBgn0036691.1.mrna1;Target=FBgn0036691.1 1 621 +
Chr1	stalkie_big_nohaplotig	CDS	9969900	9970064	.	-	0	Parent=FBgn0036691.1.mrna1;Target=FBgn0036691.1 994 1158 +
Chr1	stalkie_big_nohaplotig	CDS	9970123	9970494	.	-	0	Parent=FBgn0036691.1.mrna1;Target=FBgn0036691.1 622 993 +
Chr1	stalkie_big_nohaplotig	CDS	9970553	9971173	.	-	0	Parent=FBgn0036691.1.mrna1;Target=FBgn0036691.1 1 621 +
Chr1	gffcl	locus	9972447	9973707	.	+	.	ID=RLOC_00005626;geneIDs=FBgn0036695.1.path1;transcripts=FBgn0036695.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9972447	9973707	.	+	.	ID=FBgn0036695.1.mrna1;geneID=FBgn0036695.1.path1;Name=FBgn0036695.1;Dir=sensecoverage=100.0;identity=98.9;matches=1118;mismatches=13;indels=0;unknowns=0;locus=RLOC_00005626
Chr1	stalkie_big_nohaplotig	exon	9972447	9973211	98	+	.	Parent=FBgn0036695.1.mrna1;Target=FBgn0036695.1 1 765 +
Chr1	stalkie_big_nohaplotig	exon	9973275	9973456	98	+	.	Parent=FBgn0036695.1.mrna1;Target=FBgn0036695.1 766 947 +
Chr1	stalkie_big_nohaplotig	exon	9973524	9973707	100	+	.	Parent=FBgn0036695.1.mrna1;Target=FBgn0036695.1 948 1131 +
Chr1	stalkie_big_nohaplotig	CDS	9972447	9973211	.	+	0	Parent=FBgn0036695.1.mrna1;Target=FBgn0036695.1 1 765 +
Chr1	stalkie_big_nohaplotig	CDS	9973275	9973456	.	+	0	Parent=FBgn0036695.1.mrna1;Target=FBgn0036695.1 766 947 +
Chr1	stalkie_big_nohaplotig	CDS	9973524	9973707	.	+	1	Parent=FBgn0036695.1.mrna1;Target=FBgn0036695.1 948 1131 +
Chr1	gffcl	locus	9974495	9974962	.	-	.	ID=RLOC_00005627;geneIDs=comp149680_c0_seq1.path1;transcripts=comp149680_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9974495	9974962	.	-	.	ID=comp149680_c0_seq1.mrna1;geneID=comp149680_c0_seq1.path1;Name=comp149680_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=463;mismatches=5;indels=0;unknowns=0;Target=comp149680_c0_seq1 468 1 .;CDS_Target=comp149680_c0_seq1 405 202 .;locus=RLOC_00005627
Chr1	stalkie_big_nohaplotig	exon	9974495	9974962	98	-	.	Parent=comp149680_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	9974558	9974761	.	-	0	Parent=comp149680_c0_seq1.mrna1
Chr1	gffcl	locus	9975160	9975717	.	-	.	ID=RLOC_00005628;geneIDs=FBgn0036696.1.path1;transcripts=FBgn0036696.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9975160	9975717	.	-	.	ID=FBgn0036696.1.mrna1;geneID=FBgn0036696.1.path1;Name=FBgn0036696.1;Dir=sensecoverage=100.0;identity=99.8;matches=437;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005628
Chr1	stalkie_big_nohaplotig	exon	9975160	9975333	99	-	.	Parent=FBgn0036696.1.mrna1;Target=FBgn0036696.1 265 438 +
Chr1	stalkie_big_nohaplotig	exon	9975396	9975633	100	-	.	Parent=FBgn0036696.1.mrna1;Target=FBgn0036696.1 27 264 +
Chr1	stalkie_big_nohaplotig	exon	9975692	9975717	100	-	.	Parent=FBgn0036696.1.mrna1;Target=FBgn0036696.1 1 26 +
Chr1	stalkie_big_nohaplotig	CDS	9975160	9975333	.	-	0	Parent=FBgn0036696.1.mrna1;Target=FBgn0036696.1 265 438 +
Chr1	stalkie_big_nohaplotig	CDS	9975396	9975633	.	-	1	Parent=FBgn0036696.1.mrna1;Target=FBgn0036696.1 27 264 +
Chr1	stalkie_big_nohaplotig	CDS	9975692	9975717	.	-	0	Parent=FBgn0036696.1.mrna1;Target=FBgn0036696.1 1 26 +
Chr1	gffcl	locus	9980005	9983062	.	+	.	ID=RLOC_00005629;geneIDs=FBgn0035484.1.path1;transcripts=FBgn0035484.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9980005	9983062	.	+	.	ID=FBgn0035484.1.mrna1;geneID=FBgn0035484.1.path1;Name=FBgn0035484.1;Dir=sensecoverage=100.0;identity=99.6;matches=1655;mismatches=7;indels=0;unknowns=0;locus=RLOC_00005629
Chr1	stalkie_big_nohaplotig	exon	9980005	9980208	99	+	.	Parent=FBgn0035484.1.mrna1;Target=FBgn0035484.1 1 204 +
Chr1	stalkie_big_nohaplotig	exon	9981354	9982228	99	+	.	Parent=FBgn0035484.1.mrna1;Target=FBgn0035484.1 205 1079 +
Chr1	stalkie_big_nohaplotig	exon	9982281	9982431	100	+	.	Parent=FBgn0035484.1.mrna1;Target=FBgn0035484.1 1080 1230 +
Chr1	stalkie_big_nohaplotig	exon	9982507	9982581	100	+	.	Parent=FBgn0035484.1.mrna1;Target=FBgn0035484.1 1231 1305 +
Chr1	stalkie_big_nohaplotig	exon	9982647	9982865	100	+	.	Parent=FBgn0035484.1.mrna1;Target=FBgn0035484.1 1306 1524 +
Chr1	stalkie_big_nohaplotig	exon	9982925	9983062	100	+	.	Parent=FBgn0035484.1.mrna1;Target=FBgn0035484.1 1525 1662 +
Chr1	stalkie_big_nohaplotig	CDS	9980005	9980208	.	+	0	Parent=FBgn0035484.1.mrna1;Target=FBgn0035484.1 1 204 +
Chr1	stalkie_big_nohaplotig	CDS	9981354	9982228	.	+	0	Parent=FBgn0035484.1.mrna1;Target=FBgn0035484.1 205 1079 +
Chr1	stalkie_big_nohaplotig	CDS	9982281	9982431	.	+	1	Parent=FBgn0035484.1.mrna1;Target=FBgn0035484.1 1080 1230 +
Chr1	stalkie_big_nohaplotig	CDS	9982507	9982581	.	+	0	Parent=FBgn0035484.1.mrna1;Target=FBgn0035484.1 1231 1305 +
Chr1	stalkie_big_nohaplotig	CDS	9982647	9982865	.	+	0	Parent=FBgn0035484.1.mrna1;Target=FBgn0035484.1 1306 1524 +
Chr1	stalkie_big_nohaplotig	CDS	9982925	9983062	.	+	0	Parent=FBgn0035484.1.mrna1;Target=FBgn0035484.1 1525 1662 +
Chr1	gffcl	locus	9983258	9985435	.	-	.	ID=RLOC_00005630;geneIDs=FBgn0035483.1.path1;transcripts=FBgn0035483.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9983258	9985435	.	-	.	ID=FBgn0035483.1.mrna1;geneID=FBgn0035483.1.path1;Name=FBgn0035483.1;Dir=sensecoverage=100.0;identity=99.8;matches=1039;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005630
Chr1	stalkie_big_nohaplotig	exon	9983258	9983374	100	-	.	Parent=FBgn0035483.1.mrna1;Target=FBgn0035483.1 925 1041 +
Chr1	stalkie_big_nohaplotig	exon	9984323	9984530	100	-	.	Parent=FBgn0035483.1.mrna1;Target=FBgn0035483.1 717 924 +
Chr1	stalkie_big_nohaplotig	exon	9984605	9985018	100	-	.	Parent=FBgn0035483.1.mrna1;Target=FBgn0035483.1 303 716 +
Chr1	stalkie_big_nohaplotig	exon	9985076	9985245	99	-	.	Parent=FBgn0035483.1.mrna1;Target=FBgn0035483.1 133 302 +
Chr1	stalkie_big_nohaplotig	exon	9985304	9985435	99	-	.	Parent=FBgn0035483.1.mrna1;Target=FBgn0035483.1 1 132 +
Chr1	stalkie_big_nohaplotig	CDS	9983258	9983374	.	-	0	Parent=FBgn0035483.1.mrna1;Target=FBgn0035483.1 925 1041 +
Chr1	stalkie_big_nohaplotig	CDS	9984323	9984530	.	-	1	Parent=FBgn0035483.1.mrna1;Target=FBgn0035483.1 717 924 +
Chr1	stalkie_big_nohaplotig	CDS	9984605	9985018	.	-	1	Parent=FBgn0035483.1.mrna1;Target=FBgn0035483.1 303 716 +
Chr1	stalkie_big_nohaplotig	CDS	9985076	9985245	.	-	0	Parent=FBgn0035483.1.mrna1;Target=FBgn0035483.1 133 302 +
Chr1	stalkie_big_nohaplotig	CDS	9985304	9985435	.	-	0	Parent=FBgn0035483.1.mrna1;Target=FBgn0035483.1 1 132 +
Chr1	gffcl	locus	9993242	9994110	.	+	.	ID=RLOC_00005632;geneIDs=FBgn0052302.1.path1;transcripts=FBgn0052302.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9993242	9994110	.	+	.	ID=FBgn0052302.1.mrna1;geneID=FBgn0052302.1.path1;Name=FBgn0052302.1;Dir=sensecoverage=100.0;identity=99.9;matches=812;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005632
Chr1	stalkie_big_nohaplotig	exon	9993242	9993289	100	+	.	Parent=FBgn0052302.1.mrna1;Target=FBgn0052302.1 1 48 +
Chr1	stalkie_big_nohaplotig	exon	9993346	9994110	99	+	.	Parent=FBgn0052302.1.mrna1;Target=FBgn0052302.1 49 813 +
Chr1	stalkie_big_nohaplotig	CDS	9993242	9993289	.	+	0	Parent=FBgn0052302.1.mrna1;Target=FBgn0052302.1 1 48 +
Chr1	stalkie_big_nohaplotig	CDS	9993346	9994110	.	+	0	Parent=FBgn0052302.1.mrna1;Target=FBgn0052302.1 49 813 +
Chr1	gffcl	locus	9995628	9997786	.	-	.	ID=RLOC_00005633;geneIDs=FBgn0041709.1.path1;transcripts=FBgn0041709.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	9995628	9997786	.	-	.	ID=FBgn0041709.1.mrna1;geneID=FBgn0041709.1.path1;Name=FBgn0041709.1;Dir=sensecoverage=99.8;identity=99.9;matches=816;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005633
Chr1	stalkie_big_nohaplotig	exon	9995628	9995753	100	-	.	Parent=FBgn0041709.1.mrna1;Target=FBgn0041709.1 694 819 +
Chr1	stalkie_big_nohaplotig	exon	9995811	9996031	100	-	.	Parent=FBgn0041709.1.mrna1;Target=FBgn0041709.1 473 693 +
Chr1	stalkie_big_nohaplotig	exon	9996098	9996291	100	-	.	Parent=FBgn0041709.1.mrna1;Target=FBgn0041709.1 279 472 +
Chr1	stalkie_big_nohaplotig	exon	9997511	9997786	99	-	.	Parent=FBgn0041709.1.mrna1;Target=FBgn0041709.1 3 278 +
Chr1	stalkie_big_nohaplotig	CDS	9995628	9995753	.	-	0	Parent=FBgn0041709.1.mrna1;Target=FBgn0041709.1 694 819 +
Chr1	stalkie_big_nohaplotig	CDS	9995811	9996031	.	-	2	Parent=FBgn0041709.1.mrna1;Target=FBgn0041709.1 473 693 +
Chr1	stalkie_big_nohaplotig	CDS	9996098	9996291	.	-	1	Parent=FBgn0041709.1.mrna1;Target=FBgn0041709.1 279 472 +
Chr1	stalkie_big_nohaplotig	CDS	9997511	9997785	.	-	0	Parent=FBgn0041709.1.mrna1;Target=FBgn0041709.1 4 278 +
Chr1	gffcl	locus	10017464	10019119	.	+	.	ID=RLOC_00005634;geneIDs=FBgn0035328.1.path1;transcripts=FBgn0035328.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10017464	10019119	.	+	.	ID=FBgn0035328.1.mrna1;geneID=FBgn0035328.1.path1;Name=FBgn0035328.1;Dir=sensecoverage=100.0;identity=99.4;matches=1166;mismatches=7;indels=0;unknowns=0;locus=RLOC_00005634
Chr1	stalkie_big_nohaplotig	exon	10017464	10018343	99	+	.	Parent=FBgn0035328.1.mrna1;Target=FBgn0035328.1 1 880 +
Chr1	stalkie_big_nohaplotig	exon	10018827	10019119	99	+	.	Parent=FBgn0035328.1.mrna1;Target=FBgn0035328.1 881 1173 +
Chr1	stalkie_big_nohaplotig	CDS	10017464	10018343	.	+	0	Parent=FBgn0035328.1.mrna1;Target=FBgn0035328.1 1 880 +
Chr1	stalkie_big_nohaplotig	CDS	10018827	10019119	.	+	2	Parent=FBgn0035328.1.mrna1;Target=FBgn0035328.1 881 1173 +
Chr1	gffcl	locus	10038150	10042719	.	+	.	ID=RLOC_00005635;geneIDs=comp159998_c3_seq1.path1,comp160707_c1_seq1.path1;transcripts=comp159998_c3_seq1.mrna1,comp160707_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10038150	10040143	.	+	.	ID=comp159998_c3_seq1.mrna1;geneID=comp159998_c3_seq1.path1;Name=comp159998_c3_seq1;Dir=indeterminatecoverage=75.8;identity=96.7;matches=679;mismatches=19;indels=4;unknowns=0;Target=comp159998_c3_seq1 901 794 .;locus=RLOC_00005635
Chr1	stalkie_big_nohaplotig	exon	10038150	10038192	93	+	.	Parent=comp159998_c3_seq1.mrna1;Target=comp159998_c3_seq1 276 234 .
Chr1	stalkie_big_nohaplotig	exon	10039397	10040028	96	+	.	Parent=comp159998_c3_seq1.mrna1;Target=comp159998_c3_seq1 912 277 .
Chr1	stalkie_big_nohaplotig	exon	10040121	10040143	100	+	.	Parent=comp159998_c3_seq1.mrna1;Target=comp159998_c3_seq1 961 939 .
Chr1	stalkie_big_nohaplotig	CDS	10039913	10040017	.	+	0	Parent=comp159998_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10038485	10042719	.	+	.	ID=comp160707_c1_seq1.mrna1;geneID=comp160707_c1_seq1.path1;Name=comp160707_c1_seq1;Dir=antisensecoverage=99.9;identity=93.0;matches=1779;mismatches=56;indels=78;unknowns=0;locus=RLOC_00005635
Chr1	stalkie_big_nohaplotig	exon	10038485	10038660	96	+	.	Parent=comp160707_c1_seq1.mrna1;Target=comp160707_c1_seq1 1739 1908 -
Chr1	stalkie_big_nohaplotig	exon	10040112	10040284	99	+	.	Parent=comp160707_c1_seq1.mrna1;Target=comp160707_c1_seq1 1566 1738 -
Chr1	stalkie_big_nohaplotig	exon	10040337	10040491	100	+	.	Parent=comp160707_c1_seq1.mrna1;Target=comp160707_c1_seq1 1411 1565 -
Chr1	stalkie_big_nohaplotig	exon	10041259	10041351	100	+	.	Parent=comp160707_c1_seq1.mrna1;Target=comp160707_c1_seq1 1318 1410 -
Chr1	stalkie_big_nohaplotig	exon	10041410	10041597	95	+	.	Parent=comp160707_c1_seq1.mrna1;Target=comp160707_c1_seq1 1130 1317 -
Chr1	stalkie_big_nohaplotig	exon	10041664	10042719	89	+	.	Parent=comp160707_c1_seq1.mrna1;Target=comp160707_c1_seq1 2 1129 -
Chr1	stalkie_big_nohaplotig	CDS	10041282	10041351	.	+	0	Parent=comp160707_c1_seq1.mrna1;Target=comp160707_c1_seq1 1318 1387 .
Chr1	stalkie_big_nohaplotig	CDS	10041410	10041597	.	+	2	Parent=comp160707_c1_seq1.mrna1;Target=comp160707_c1_seq1 1130 1317 .
Chr1	stalkie_big_nohaplotig	CDS	10041664	10041817	.	+	0	Parent=comp160707_c1_seq1.mrna1;Target=comp160707_c1_seq1 971 1129 .
Chr1	gffcl	locus	10058785	10061130	.	-	.	ID=RLOC_00005636;geneIDs=ORF299.path1;transcripts=ORF299.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10058785	10061130	.	-	.	ID=ORF299.mrna1;geneID=ORF299.path1;Name=ORF299;Dir=sensecoverage=100.0;identity=98.2;matches=2065;mismatches=38;indels=0;unknowns=0;locus=RLOC_00005636
Chr1	stalkie_big_nohaplotig	exon	10058785	10060518	98	-	.	Parent=ORF299.mrna1;Target=ORF299 370 2103 +
Chr1	stalkie_big_nohaplotig	exon	10060618	10060791	96	-	.	Parent=ORF299.mrna1;Target=ORF299 196 369 +
Chr1	stalkie_big_nohaplotig	exon	10060881	10061006	100	-	.	Parent=ORF299.mrna1;Target=ORF299 70 195 +
Chr1	stalkie_big_nohaplotig	exon	10061062	10061130	100	-	.	Parent=ORF299.mrna1;Target=ORF299 1 69 +
Chr1	stalkie_big_nohaplotig	CDS	10058785	10060518	.	-	0	Parent=ORF299.mrna1;Target=ORF299 370 2103 +
Chr1	stalkie_big_nohaplotig	CDS	10060618	10060791	.	-	0	Parent=ORF299.mrna1;Target=ORF299 196 369 +
Chr1	stalkie_big_nohaplotig	CDS	10060881	10061006	.	-	0	Parent=ORF299.mrna1;Target=ORF299 70 195 +
Chr1	stalkie_big_nohaplotig	CDS	10061062	10061130	.	-	0	Parent=ORF299.mrna1;Target=ORF299 1 69 +
Chr1	gffcl	locus	10109150	10113093	.	+	.	ID=RLOC_00005637;geneIDs=FBgn0035331.1.path1;transcripts=FBgn0035331.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10109150	10113093	.	+	.	ID=FBgn0035331.1.mrna1;geneID=FBgn0035331.1.path1;Name=FBgn0035331.1;Dir=sensecoverage=100.0;identity=99.7;matches=1193;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005637
Chr1	stalkie_big_nohaplotig	exon	10109150	10110101	99	+	.	Parent=FBgn0035331.1.mrna1;Target=FBgn0035331.1 1 952 +
Chr1	stalkie_big_nohaplotig	exon	10112849	10113093	100	+	.	Parent=FBgn0035331.1.mrna1;Target=FBgn0035331.1 953 1197 +
Chr1	stalkie_big_nohaplotig	CDS	10109150	10110101	.	+	0	Parent=FBgn0035331.1.mrna1;Target=FBgn0035331.1 1 952 +
Chr1	stalkie_big_nohaplotig	CDS	10112849	10113093	.	+	2	Parent=FBgn0035331.1.mrna1;Target=FBgn0035331.1 953 1197 +
Chr1	gffcl	locus	10116439	10117017	.	-	.	ID=RLOC_00005638;geneIDs=comp158553_c0_seq1.path1;transcripts=comp158553_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10116439	10117017	.	-	.	ID=comp158553_c0_seq1.mrna1;geneID=comp158553_c0_seq1.path1;Name=comp158553_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=574;mismatches=5;indels=0;unknowns=0;Target=comp158553_c0_seq1 579 1 .;CDS_Target=comp158553_c0_seq1 251 3 .;locus=RLOC_00005638
Chr1	stalkie_big_nohaplotig	exon	10116439	10117017	99	-	.	Parent=comp158553_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	10116767	10117015	.	-	0	Parent=comp158553_c0_seq1.mrna1
Chr1	gffcl	locus	10140270	10140892	.	+	.	ID=RLOC_00005639;geneIDs=comp149205_c0_seq1.path1;transcripts=comp149205_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10140270	10140892	.	+	.	ID=comp149205_c0_seq1.mrna1;geneID=comp149205_c0_seq1.path1;Name=comp149205_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.4;matches=613;mismatches=10;indels=0;unknowns=0;Target=comp149205_c0_seq1 624 2 .;CDS_Target=comp149205_c0_seq1 518 270 .;locus=RLOC_00005639
Chr1	stalkie_big_nohaplotig	exon	10140270	10140892	98	+	.	Parent=comp149205_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	10140538	10140786	.	+	0	Parent=comp149205_c0_seq1.mrna1
Chr1	gffcl	locus	10145837	10148395	.	-	.	ID=RLOC_00005640;geneIDs=ORF216.path1;transcripts=ORF216.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10145837	10148395	.	-	.	ID=ORF216.mrna1;geneID=ORF216.path1;Name=ORF216;Dir=sensecoverage=100.0;identity=98.4;matches=2336;mismatches=35;indels=4;unknowns=0;locus=RLOC_00005640
Chr1	stalkie_big_nohaplotig	exon	10145837	10146910	97	-	.	Parent=ORF216.mrna1;Target=ORF216 1300 2373 +
Chr1	stalkie_big_nohaplotig	exon	10146964	10147119	98	-	.	Parent=ORF216.mrna1;Target=ORF216 1144 1299 +
Chr1	stalkie_big_nohaplotig	exon	10147180	10148281	98	-	.	Parent=ORF216.mrna1;Target=ORF216 42 1143 +
Chr1	stalkie_big_nohaplotig	exon	10148355	10148395	95	-	.	Parent=ORF216.mrna1;Target=ORF216 1 41 +
Chr1	stalkie_big_nohaplotig	CDS	10145837	10146910	.	-	0	Parent=ORF216.mrna1;Target=ORF216 1300 2373 +
Chr1	stalkie_big_nohaplotig	CDS	10146964	10147119	.	-	0	Parent=ORF216.mrna1;Target=ORF216 1144 1299 +
Chr1	stalkie_big_nohaplotig	CDS	10147180	10148268	.	-	0	Parent=ORF216.mrna1;Target=ORF216 55 1143 +
Chr1	gffcl	locus	10163051	10163788	.	-	.	ID=RLOC_00005643;geneIDs=comp149487_c0_seq1.path1;transcripts=comp149487_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10163051	10163788	.	-	.	ID=comp149487_c0_seq1.mrna1;geneID=comp149487_c0_seq1.path1;Name=comp149487_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.9;matches=737;mismatches=1;indels=0;unknowns=0;Target=comp149487_c0_seq1 742 5 .;CDS_Target=comp149487_c0_seq1 281 135 .;locus=RLOC_00005643
Chr1	stalkie_big_nohaplotig	exon	10163051	10163788	99	-	.	Parent=comp149487_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	10163512	10163658	.	-	0	Parent=comp149487_c0_seq1.mrna1
Chr1	gffcl	locus	10164901	10165595	.	+	.	ID=RLOC_00005644;geneIDs=comp72484_c0_seq1.path1;transcripts=comp72484_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10164901	10165595	.	+	.	ID=comp72484_c0_seq1.mrna1;geneID=comp72484_c0_seq1.path1;Name=comp72484_c0_seq1;Dir=indeterminatecoverage=84.6;identity=99.6;matches=664;mismatches=3;indels=0;unknowns=0;Target=comp72484_c0_seq1 549 421 .;locus=RLOC_00005644
Chr1	stalkie_big_nohaplotig	exon	10164901	10165169	98	+	.	Parent=comp72484_c0_seq1.mrna1;Target=comp72484_c0_seq1 390 122 .
Chr1	stalkie_big_nohaplotig	exon	10165198	10165595	100	+	.	Parent=comp72484_c0_seq1.mrna1;Target=comp72484_c0_seq1 788 391 .
Chr1	stalkie_big_nohaplotig	CDS	10165228	10165356	.	+	0	Parent=comp72484_c0_seq1.mrna1
Chr1	gffcl	locus	10179281	10180634	.	-	.	ID=RLOC_00005645;geneIDs=comp150799_c2_seq1.path1;transcripts=comp150799_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10179281	10180634	.	-	.	ID=comp150799_c2_seq1.mrna1;geneID=comp150799_c2_seq1.path1;Name=comp150799_c2_seq1;Dir=indeterminatecoverage=99.8;identity=95.9;matches=1320;mismatches=22;indels=34;unknowns=0;Target=comp150799_c2_seq1 1366 3 .;CDS_Target=comp150799_c2_seq1 516 313 .;locus=RLOC_00005645
Chr1	stalkie_big_nohaplotig	exon	10179281	10180634	95	-	.	Parent=comp150799_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	10180121	10180324	.	-	0	Parent=comp150799_c2_seq1.mrna1
Chr1	gffcl	locus	10225446	10227347	.	-	.	ID=RLOC_00005646;geneIDs=ORF456.path1;transcripts=ORF456.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10225446	10227347	.	-	.	ID=ORF456.mrna1;geneID=ORF456.path1;Name=ORF456;Dir=sensecoverage=100.0;identity=98.3;matches=1758;mismatches=27;indels=3;unknowns=0;locus=RLOC_00005646
Chr1	stalkie_big_nohaplotig	exon	10225446	10226504	98	-	.	Parent=ORF456.mrna1;Target=ORF456 730 1788 +
Chr1	stalkie_big_nohaplotig	exon	10226568	10226723	100	-	.	Parent=ORF456.mrna1;Target=ORF456 574 729 +
Chr1	stalkie_big_nohaplotig	exon	10226778	10227347	97	-	.	Parent=ORF456.mrna1;Target=ORF456 1 573 +
Chr1	stalkie_big_nohaplotig	CDS	10225446	10226504	.	-	0	Parent=ORF456.mrna1;Target=ORF456 730 1788 +
Chr1	stalkie_big_nohaplotig	CDS	10226568	10226723	.	-	0	Parent=ORF456.mrna1;Target=ORF456 574 729 +
Chr1	stalkie_big_nohaplotig	CDS	10226778	10227347	.	-	0	Parent=ORF456.mrna1;Target=ORF456 1 573 +
Chr1	gffcl	locus	10310071	10313304	.	-	.	ID=RLOC_00005647;geneIDs=FBgn0035333.1.path1;transcripts=FBgn0035333.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10310071	10313304	.	-	.	ID=FBgn0035333.1.mrna1;geneID=FBgn0035333.1.path1;Name=FBgn0035333.1;Dir=sensecoverage=100.0;identity=99.6;matches=3107;mismatches=13;indels=0;unknowns=0;locus=RLOC_00005647
Chr1	stalkie_big_nohaplotig	exon	10310071	10311531	99	-	.	Parent=FBgn0035333.1.mrna1;Target=FBgn0035333.1 1660 3120 +
Chr1	stalkie_big_nohaplotig	exon	10311586	10311780	98	-	.	Parent=FBgn0035333.1.mrna1;Target=FBgn0035333.1 1465 1659 +
Chr1	stalkie_big_nohaplotig	exon	10311841	10313304	99	-	.	Parent=FBgn0035333.1.mrna1;Target=FBgn0035333.1 1 1464 +
Chr1	stalkie_big_nohaplotig	CDS	10310071	10311531	.	-	0	Parent=FBgn0035333.1.mrna1;Target=FBgn0035333.1 1660 3120 +
Chr1	stalkie_big_nohaplotig	CDS	10311586	10311780	.	-	0	Parent=FBgn0035333.1.mrna1;Target=FBgn0035333.1 1465 1659 +
Chr1	stalkie_big_nohaplotig	CDS	10311841	10313304	.	-	0	Parent=FBgn0035333.1.mrna1;Target=FBgn0035333.1 1 1464 +
Chr1	gffcl	locus	10316723	10318705	.	+	.	ID=RLOC_00005648;geneIDs=FBgn0250911.1.path1,comp134776_c0_seq1.path1;transcripts=FBgn0250911.1.mrna1,comp134776_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10316723	10318705	.	+	.	ID=FBgn0250911.1.mrna1;geneID=FBgn0250911.1.path1;Name=FBgn0250911.1;Dir=sensecoverage=100.0;identity=99.8;matches=410;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005648
Chr1	stalkie_big_nohaplotig	exon	10316723	10316827	100	+	.	Parent=FBgn0250911.1.mrna1;Target=FBgn0250911.1 1 105 +
Chr1	stalkie_big_nohaplotig	exon	10316892	10317030	100	+	.	Parent=FBgn0250911.1.mrna1;Target=FBgn0250911.1 106 244 +
Chr1	stalkie_big_nohaplotig	exon	10318539	10318705	99	+	.	Parent=FBgn0250911.1.mrna1;Target=FBgn0250911.1 245 411 +
Chr1	stalkie_big_nohaplotig	CDS	10316723	10316827	.	+	0	Parent=FBgn0250911.1.mrna1;Target=FBgn0250911.1 1 105 +
Chr1	stalkie_big_nohaplotig	CDS	10316892	10317030	.	+	0	Parent=FBgn0250911.1.mrna1;Target=FBgn0250911.1 106 244 +
Chr1	stalkie_big_nohaplotig	CDS	10318539	10318705	.	+	2	Parent=FBgn0250911.1.mrna1;Target=FBgn0250911.1 245 411 +
Chr1	stalkie_big_nohaplotig	mRNA	10317256	10318559	.	+	.	ID=comp134776_c0_seq1.mrna1;geneID=comp134776_c0_seq1.path1;Name=comp134776_c0_seq1;Dir=sensecoverage=100.0;identity=98.5;matches=203;mismatches=1;indels=2;unknowns=0;Target=comp134776_c0_seq1 1 159 +;locus=RLOC_00005648
Chr1	stalkie_big_nohaplotig	exon	10317256	10317438	98	+	.	Parent=comp134776_c0_seq1.mrna1;Target=comp134776_c0_seq1 1 185 +
Chr1	stalkie_big_nohaplotig	exon	10318539	10318559	100	+	.	Parent=comp134776_c0_seq1.mrna1;Target=comp134776_c0_seq1 186 206 +
Chr1	stalkie_big_nohaplotig	CDS	10317256	10317412	.	+	0	Parent=comp134776_c0_seq1.mrna1
Chr1	gffcl	locus	10328024	10332198	.	+	.	ID=RLOC_00005649;geneIDs=FBgn0035357.1.path1,comp149961_c0_seq1.path1;transcripts=comp149961_c0_seq1.mrna1,FBgn0035357.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10328024	10328466	.	+	.	ID=comp149961_c0_seq1.mrna1;geneID=comp149961_c0_seq1.path1;Name=comp149961_c0_seq1;Dir=indeterminatecoverage=95.1;identity=100.0;matches=328;mismatches=0;indels=0;unknowns=0;Target=comp149961_c0_seq1 193 131 .;locus=RLOC_00005649
Chr1	stalkie_big_nohaplotig	exon	10328024	10328327	100	+	.	Parent=comp149961_c0_seq1.mrna1;Target=comp149961_c0_seq1 321 18 .
Chr1	stalkie_big_nohaplotig	exon	10328443	10328466	100	+	.	Parent=comp149961_c0_seq1.mrna1;Target=comp149961_c0_seq1 346 323 .
Chr1	stalkie_big_nohaplotig	CDS	10328137	10328199	.	+	0	Parent=comp149961_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10328467	10332198	.	+	.	ID=FBgn0035357.1.mrna1;geneID=FBgn0035357.1.path1;Name=FBgn0035357.1;Dir=sensecoverage=99.9;identity=99.4;matches=3417;mismatches=19;indels=0;unknowns=0;locus=RLOC_00005649
Chr1	stalkie_big_nohaplotig	exon	10328467	10330872	99	+	.	Parent=FBgn0035357.1.mrna1;Target=FBgn0035357.1 1 2406 +
Chr1	stalkie_big_nohaplotig	exon	10330935	10331192	98	+	.	Parent=FBgn0035357.1.mrna1;Target=FBgn0035357.1 2407 2664 +
Chr1	stalkie_big_nohaplotig	exon	10331254	10331499	99	+	.	Parent=FBgn0035357.1.mrna1;Target=FBgn0035357.1 2665 2910 +
Chr1	stalkie_big_nohaplotig	exon	10331577	10331756	100	+	.	Parent=FBgn0035357.1.mrna1;Target=FBgn0035357.1 2911 3090 +
Chr1	stalkie_big_nohaplotig	exon	10331853	10332198	100	+	.	Parent=FBgn0035357.1.mrna1;Target=FBgn0035357.1 3091 3436 +
Chr1	stalkie_big_nohaplotig	CDS	10328467	10330872	.	+	0	Parent=FBgn0035357.1.mrna1;Target=FBgn0035357.1 1 2406 +
Chr1	stalkie_big_nohaplotig	CDS	10330935	10331192	.	+	0	Parent=FBgn0035357.1.mrna1;Target=FBgn0035357.1 2407 2664 +
Chr1	stalkie_big_nohaplotig	CDS	10331254	10331499	.	+	0	Parent=FBgn0035357.1.mrna1;Target=FBgn0035357.1 2665 2910 +
Chr1	stalkie_big_nohaplotig	CDS	10331577	10331756	.	+	0	Parent=FBgn0035357.1.mrna1;Target=FBgn0035357.1 2911 3090 +
Chr1	stalkie_big_nohaplotig	CDS	10331853	10332197	.	+	0	Parent=FBgn0035357.1.mrna1;Target=FBgn0035357.1 3091 3435 +
Chr1	gffcl	locus	10337567	10341245	.	+	.	ID=RLOC_00005650;geneIDs=FBgn0035477.1.path1;transcripts=FBgn0035477.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10337567	10341245	.	+	.	ID=FBgn0035477.1.mrna1;geneID=FBgn0035477.1.path1;Name=FBgn0035477.1;Dir=sensecoverage=100.0;identity=99.6;matches=2257;mismatches=8;indels=0;unknowns=0;locus=RLOC_00005650
Chr1	stalkie_big_nohaplotig	exon	10337567	10337583	100	+	.	Parent=FBgn0035477.1.mrna1;Target=FBgn0035477.1 1 17 +
Chr1	stalkie_big_nohaplotig	exon	10338001	10338802	99	+	.	Parent=FBgn0035477.1.mrna1;Target=FBgn0035477.1 18 819 +
Chr1	stalkie_big_nohaplotig	exon	10338865	10339082	100	+	.	Parent=FBgn0035477.1.mrna1;Target=FBgn0035477.1 820 1037 +
Chr1	stalkie_big_nohaplotig	exon	10340018	10341245	99	+	.	Parent=FBgn0035477.1.mrna1;Target=FBgn0035477.1 1038 2265 +
Chr1	stalkie_big_nohaplotig	CDS	10337567	10337583	.	+	0	Parent=FBgn0035477.1.mrna1;Target=FBgn0035477.1 1 17 +
Chr1	stalkie_big_nohaplotig	CDS	10338001	10338802	.	+	1	Parent=FBgn0035477.1.mrna1;Target=FBgn0035477.1 18 819 +
Chr1	stalkie_big_nohaplotig	CDS	10338865	10339082	.	+	0	Parent=FBgn0035477.1.mrna1;Target=FBgn0035477.1 820 1037 +
Chr1	stalkie_big_nohaplotig	CDS	10340018	10341245	.	+	1	Parent=FBgn0035477.1.mrna1;Target=FBgn0035477.1 1038 2265 +
Chr1	gffcl	locus	10352517	10353306	.	+	.	ID=RLOC_00005651;geneIDs=comp150632_c0_seq1.path1;transcripts=comp150632_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10352517	10353306	.	+	.	ID=comp150632_c0_seq1.mrna1;geneID=comp150632_c0_seq1.path1;Name=comp150632_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=787;mismatches=2;indels=3;unknowns=0;Target=comp150632_c0_seq1 791 1 .;CDS_Target=comp150632_c0_seq1 769 674 .;locus=RLOC_00005651
Chr1	stalkie_big_nohaplotig	exon	10352517	10353306	99	+	.	Parent=comp150632_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	10353189	10353284	.	+	0	Parent=comp150632_c0_seq1.mrna1
Chr1	gffcl	locus	10378108	10383516	.	-	.	ID=RLOC_00005652;geneIDs=comp161353_c1_seq1.path1;transcripts=comp161353_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10378108	10383516	.	-	.	ID=comp161353_c1_seq1.mrna1;geneID=comp161353_c1_seq1.path1;Name=comp161353_c1_seq1;Dir=antisensecoverage=100.0;identity=97.3;matches=1698;mismatches=40;indels=8;unknowns=0;Target=comp161353_c1_seq1 1139 1264 .;locus=RLOC_00005652
Chr1	stalkie_big_nohaplotig	exon	10378108	10379576	96	-	.	Parent=comp161353_c1_seq1.mrna1;Target=comp161353_c1_seq1 1 1461 -
Chr1	stalkie_big_nohaplotig	exon	10383240	10383516	100	-	.	Parent=comp161353_c1_seq1.mrna1;Target=comp161353_c1_seq1 1462 1738 -
Chr1	stalkie_big_nohaplotig	CDS	10379254	10379379	.	-	0	Parent=comp161353_c1_seq1.mrna1
Chr1	gffcl	locus	10439992	10440641	.	-	.	ID=RLOC_00005653;geneIDs=comp148766_c0_seq1.path1;transcripts=comp148766_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10439992	10440641	.	-	.	ID=comp148766_c0_seq1.mrna1;geneID=comp148766_c0_seq1.path1;Name=comp148766_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.2;matches=645;mismatches=5;indels=0;unknowns=0;Target=comp148766_c0_seq1 652 3 .;CDS_Target=comp148766_c0_seq1 283 5 .;locus=RLOC_00005653
Chr1	stalkie_big_nohaplotig	exon	10439992	10440641	99	-	.	Parent=comp148766_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	10440361	10440639	.	-	0	Parent=comp148766_c0_seq1.mrna1
Chr1	gffcl	locus	10449761	10450303	.	+	.	ID=RLOC_00005654;geneIDs=comp140593_c0_seq1.path1;transcripts=comp140593_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10449761	10450303	.	+	.	ID=comp140593_c0_seq1.mrna1;geneID=comp140593_c0_seq1.path1;Name=comp140593_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=543;mismatches=0;indels=0;unknowns=0;Target=comp140593_c0_seq1 543 1 .;CDS_Target=comp140593_c0_seq1 341 150 .;locus=RLOC_00005654
Chr1	stalkie_big_nohaplotig	exon	10449761	10450303	100	+	.	Parent=comp140593_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	10449910	10450101	.	+	0	Parent=comp140593_c0_seq1.mrna1
Chr1	gffcl	locus	10478605	10481519	.	+	.	ID=RLOC_00005656;geneIDs=comp161081_c0_seq1.path1;transcripts=comp161081_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10478605	10481519	.	+	.	ID=comp161081_c0_seq1.mrna1;geneID=comp161081_c0_seq1.path1;Name=comp161081_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=2899;mismatches=13;indels=5;unknowns=0;Target=comp161081_c0_seq1 2914 1 .;CDS_Target=comp161081_c0_seq1 320 183 .;locus=RLOC_00005656
Chr1	stalkie_big_nohaplotig	exon	10478605	10481519	99	+	.	Parent=comp161081_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	10478789	10478926	.	+	0	Parent=comp161081_c0_seq1.mrna1
Chr1	gffcl	locus	10481705	10482447	.	+	.	ID=RLOC_00005657;geneIDs=comp154860_c0_seq1.path1;transcripts=comp154860_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10481705	10482447	.	+	.	ID=comp154860_c0_seq1.mrna1;geneID=comp154860_c0_seq1.path1;Name=comp154860_c0_seq1;Dir=indeterminatecoverage=98.8;identity=97.2;matches=726;mismatches=16;indels=5;unknowns=0;Target=comp154860_c0_seq1 746 1 .;CDS_Target=comp154860_c0_seq1 220 152 .;locus=RLOC_00005657
Chr1	stalkie_big_nohaplotig	exon	10481705	10482447	97	+	.	Parent=comp154860_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	10481856	10481920	.	+	0	Parent=comp154860_c0_seq1.mrna1
Chr1	gffcl	locus	10484328	10485097	.	-	.	ID=RLOC_00005658;geneIDs=comp157610_c0_seq1.path1;transcripts=comp157610_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10484328	10485097	.	-	.	ID=comp157610_c0_seq1.mrna1;geneID=comp157610_c0_seq1.path1;Name=comp157610_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=755;mismatches=15;indels=6;unknowns=0;Target=comp157610_c0_seq1 776 1 .;CDS_Target=comp157610_c0_seq1 413 288 .;locus=RLOC_00005658
Chr1	stalkie_big_nohaplotig	exon	10484328	10485097	97	-	.	Parent=comp157610_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	10484685	10484810	.	-	0	Parent=comp157610_c0_seq1.mrna1
Chr1	gffcl	locus	10487315	10488945	.	-	.	ID=RLOC_00005659;geneIDs=FBgn0039710.1.path1;transcripts=FBgn0039710.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10487315	10488945	.	-	.	ID=FBgn0039710.1.mrna1;geneID=FBgn0039710.1.path1;Name=FBgn0039710.1;Dir=sensecoverage=100.0;identity=99.5;matches=1296;mismatches=6;indels=0;unknowns=0;locus=RLOC_00005659
Chr1	stalkie_big_nohaplotig	exon	10487315	10487371	98	-	.	Parent=FBgn0039710.1.mrna1;Target=FBgn0039710.1 1246 1302 +
Chr1	stalkie_big_nohaplotig	exon	10487506	10487906	99	-	.	Parent=FBgn0039710.1.mrna1;Target=FBgn0039710.1 845 1245 +
Chr1	stalkie_big_nohaplotig	exon	10487971	10488134	99	-	.	Parent=FBgn0039710.1.mrna1;Target=FBgn0039710.1 681 844 +
Chr1	stalkie_big_nohaplotig	exon	10488209	10488404	99	-	.	Parent=FBgn0039710.1.mrna1;Target=FBgn0039710.1 485 680 +
Chr1	stalkie_big_nohaplotig	exon	10488462	10488945	100	-	.	Parent=FBgn0039710.1.mrna1;Target=FBgn0039710.1 1 484 +
Chr1	stalkie_big_nohaplotig	CDS	10487315	10487371	.	-	0	Parent=FBgn0039710.1.mrna1;Target=FBgn0039710.1 1246 1302 +
Chr1	stalkie_big_nohaplotig	CDS	10487506	10487906	.	-	2	Parent=FBgn0039710.1.mrna1;Target=FBgn0039710.1 845 1245 +
Chr1	stalkie_big_nohaplotig	CDS	10487971	10488134	.	-	1	Parent=FBgn0039710.1.mrna1;Target=FBgn0039710.1 681 844 +
Chr1	stalkie_big_nohaplotig	CDS	10488209	10488404	.	-	2	Parent=FBgn0039710.1.mrna1;Target=FBgn0039710.1 485 680 +
Chr1	stalkie_big_nohaplotig	CDS	10488462	10488945	.	-	0	Parent=FBgn0039710.1.mrna1;Target=FBgn0039710.1 1 484 +
Chr1	gffcl	locus	10490541	12217845	.	+	.	ID=RLOC_00005660;geneIDs=FBgn0025455.1.path1,comp162471_c0_seq1.path1;transcripts=comp162471_c0_seq1.mrna1,FBgn0025455.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10490541	12217845	.	+	.	ID=comp162471_c0_seq1.mrna1;geneID=comp162471_c0_seq1.path1;Name=comp162471_c0_seq1;Dir=sensecoverage=100.0;identity=97.5;matches=4830;mismatches=92;indels=32;unknowns=0;locus=RLOC_00005660
Chr1	stalkie_big_nohaplotig	exon	10490541	10491182	99	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 1 643 +
Chr1	stalkie_big_nohaplotig	exon	10491253	10491581	100	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 644 972 +
Chr1	stalkie_big_nohaplotig	exon	10491644	10491689	97	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 973 1018 +
Chr1	stalkie_big_nohaplotig	exon	10491762	10491852	100	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 1019 1109 +
Chr1	stalkie_big_nohaplotig	exon	10491919	10492369	99	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 1110 1560 +
Chr1	stalkie_big_nohaplotig	exon	10492431	10494679	99	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 1561 3809 +
Chr1	stalkie_big_nohaplotig	exon	10502973	10503738	99	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 3810 4574 +
Chr1	stalkie_big_nohaplotig	exon	12122928	12122929	100	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 4575 4576 +
Chr1	stalkie_big_nohaplotig	exon	12134515	12134536	90	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 4577 4598 +
Chr1	stalkie_big_nohaplotig	exon	12135554	12135557	100	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 4599 4602 +
Chr1	stalkie_big_nohaplotig	exon	12151742	12151749	100	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 4603 4610 +
Chr1	stalkie_big_nohaplotig	exon	12158014	12158018	100	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 4611 4615 +
Chr1	stalkie_big_nohaplotig	exon	12158028	12158036	100	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 4652 4660 +
Chr1	stalkie_big_nohaplotig	exon	12164002	12164010	88	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 4661 4669 +
Chr1	stalkie_big_nohaplotig	exon	12169998	12170048	58	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 4670 4722 +
Chr1	stalkie_big_nohaplotig	exon	12187480	12187485	100	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 4723 4728 +
Chr1	stalkie_big_nohaplotig	exon	12195256	12195261	100	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 4729 4734 +
Chr1	stalkie_big_nohaplotig	exon	12203447	12203449	100	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 4735 4737 +
Chr1	stalkie_big_nohaplotig	exon	12203619	12203622	100	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 4738 4741 +
Chr1	stalkie_big_nohaplotig	exon	12204525	12204537	92	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 4742 4754 +
Chr1	stalkie_big_nohaplotig	exon	12211987	12211988	50	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 4755 4756 +
Chr1	stalkie_big_nohaplotig	exon	12212205	12212215	100	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 4757 4767 +
Chr1	stalkie_big_nohaplotig	exon	12212225	12212233	100	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 4814 4822 +
Chr1	stalkie_big_nohaplotig	exon	12214761	12214799	46	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 4834 4880 +
Chr1	stalkie_big_nohaplotig	exon	12216269	12216313	54	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 4881 4932 +
Chr1	stalkie_big_nohaplotig	exon	12216591	12216641	52	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 4947 5002 +
Chr1	stalkie_big_nohaplotig	exon	12216836	12216843	100	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 5003 5010 +
Chr1	stalkie_big_nohaplotig	exon	12217416	12217424	100	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 5011 5019 +
Chr1	stalkie_big_nohaplotig	exon	12217470	12217477	100	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 5024 5031 +
Chr1	stalkie_big_nohaplotig	exon	12217706	12217713	100	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 5053 5060 +
Chr1	stalkie_big_nohaplotig	exon	12217825	12217845	100	+	.	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 5191 5211 +
Chr1	stalkie_big_nohaplotig	CDS	10490989	10491182	.	+	0	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 450 643 +
Chr1	stalkie_big_nohaplotig	CDS	10491253	10491581	.	+	1	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 644 972 +
Chr1	stalkie_big_nohaplotig	CDS	10491644	10491689	.	+	2	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 973 1018 +
Chr1	stalkie_big_nohaplotig	CDS	10491762	10491852	.	+	1	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 1019 1109 +
Chr1	stalkie_big_nohaplotig	CDS	10491919	10492369	.	+	0	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 1110 1560 +
Chr1	stalkie_big_nohaplotig	CDS	10492431	10494679	.	+	2	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 1561 3809 +
Chr1	stalkie_big_nohaplotig	CDS	10502973	10502978	.	+	0	Parent=comp162471_c0_seq1.mrna1;Target=comp162471_c0_seq1 3810 3815 +
Chr1	stalkie_big_nohaplotig	mRNA	10490968	10499226	.	+	.	ID=FBgn0025455.1.mrna1;geneID=FBgn0025455.1.path1;Name=FBgn0025455.1;Dir=sensecoverage=100.0;identity=99.6;matches=3534;mismatches=15;indels=0;unknowns=0;locus=RLOC_00005660
Chr1	stalkie_big_nohaplotig	exon	10490968	10491182	99	+	.	Parent=FBgn0025455.1.mrna1;Target=FBgn0025455.1 1 215 +
Chr1	stalkie_big_nohaplotig	exon	10491253	10491581	100	+	.	Parent=FBgn0025455.1.mrna1;Target=FBgn0025455.1 216 544 +
Chr1	stalkie_big_nohaplotig	exon	10491644	10491689	97	+	.	Parent=FBgn0025455.1.mrna1;Target=FBgn0025455.1 545 590 +
Chr1	stalkie_big_nohaplotig	exon	10491762	10491852	100	+	.	Parent=FBgn0025455.1.mrna1;Target=FBgn0025455.1 591 681 +
Chr1	stalkie_big_nohaplotig	exon	10491919	10492369	99	+	.	Parent=FBgn0025455.1.mrna1;Target=FBgn0025455.1 682 1132 +
Chr1	stalkie_big_nohaplotig	exon	10492431	10494679	99	+	.	Parent=FBgn0025455.1.mrna1;Target=FBgn0025455.1 1133 3381 +
Chr1	stalkie_big_nohaplotig	exon	10499059	10499226	98	+	.	Parent=FBgn0025455.1.mrna1;Target=FBgn0025455.1 3382 3549 +
Chr1	stalkie_big_nohaplotig	CDS	10490968	10491182	.	+	0	Parent=FBgn0025455.1.mrna1;Target=FBgn0025455.1 1 215 +
Chr1	stalkie_big_nohaplotig	CDS	10491253	10491581	.	+	1	Parent=FBgn0025455.1.mrna1;Target=FBgn0025455.1 216 544 +
Chr1	stalkie_big_nohaplotig	CDS	10491644	10491689	.	+	2	Parent=FBgn0025455.1.mrna1;Target=FBgn0025455.1 545 590 +
Chr1	stalkie_big_nohaplotig	CDS	10491762	10491852	.	+	1	Parent=FBgn0025455.1.mrna1;Target=FBgn0025455.1 591 681 +
Chr1	stalkie_big_nohaplotig	CDS	10491919	10492369	.	+	0	Parent=FBgn0025455.1.mrna1;Target=FBgn0025455.1 682 1132 +
Chr1	stalkie_big_nohaplotig	CDS	10492431	10494679	.	+	2	Parent=FBgn0025455.1.mrna1;Target=FBgn0025455.1 1133 3381 +
Chr1	stalkie_big_nohaplotig	CDS	10499059	10499226	.	+	0	Parent=FBgn0025455.1.mrna1;Target=FBgn0025455.1 3382 3549 +
Chr1	gffcl	locus	10495929	10497826	.	-	.	ID=RLOC_00005661;geneIDs=comp162186_c0_seq1.path1;transcripts=comp162186_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10495929	10497826	.	-	.	ID=comp162186_c0_seq1.mrna1;geneID=comp162186_c0_seq1.path1;Name=comp162186_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.1;matches=1800;mismatches=45;indels=68;unknowns=0;Target=comp162186_c0_seq1 1860 1 .;CDS_Target=comp162186_c0_seq1 115 2 .;locus=RLOC_00005661
Chr1	stalkie_big_nohaplotig	exon	10495929	10497826	94	-	.	Parent=comp162186_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	10497712	10497825	.	-	0	Parent=comp162186_c0_seq1.mrna1
Chr1	gffcl	locus	10511680	10535246	.	.	.	ID=RLOC_00005662;geneIDs=FBgn0259164.1.path1,comp73580_c0_seq1.path1;transcripts=FBgn0259164.1.mrna1,comp73580_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10511680	10535246	.	+	.	ID=FBgn0259164.1.mrna1;geneID=FBgn0259164.1.path1;Name=FBgn0259164.1;Dir=sensecoverage=100.0;identity=100.0;matches=1977;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005662
Chr1	stalkie_big_nohaplotig	exon	10511680	10512086	100	+	.	Parent=FBgn0259164.1.mrna1;Target=FBgn0259164.1 1 407 +
Chr1	stalkie_big_nohaplotig	exon	10523535	10523977	100	+	.	Parent=FBgn0259164.1.mrna1;Target=FBgn0259164.1 408 850 +
Chr1	stalkie_big_nohaplotig	exon	10533534	10533726	100	+	.	Parent=FBgn0259164.1.mrna1;Target=FBgn0259164.1 851 1043 +
Chr1	stalkie_big_nohaplotig	exon	10534313	10535246	100	+	.	Parent=FBgn0259164.1.mrna1;Target=FBgn0259164.1 1044 1977 +
Chr1	stalkie_big_nohaplotig	CDS	10511680	10512086	.	+	0	Parent=FBgn0259164.1.mrna1;Target=FBgn0259164.1 1 407 +
Chr1	stalkie_big_nohaplotig	CDS	10523535	10523977	.	+	1	Parent=FBgn0259164.1.mrna1;Target=FBgn0259164.1 408 850 +
Chr1	stalkie_big_nohaplotig	CDS	10533534	10533726	.	+	2	Parent=FBgn0259164.1.mrna1;Target=FBgn0259164.1 851 1043 +
Chr1	stalkie_big_nohaplotig	CDS	10534313	10535246	.	+	1	Parent=FBgn0259164.1.mrna1;Target=FBgn0259164.1 1044 1977 +
Chr1	stalkie_big_nohaplotig	mRNA	10523954	10524508	.	-	.	ID=comp73580_c0_seq1.mrna1;geneID=comp73580_c0_seq1.path1;Name=comp73580_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=555;mismatches=0;indels=0;unknowns=0;Target=comp73580_c0_seq1 555 1 .;CDS_Target=comp73580_c0_seq1 553 473 .;locus=RLOC_00005662
Chr1	stalkie_big_nohaplotig	exon	10523954	10524508	100	-	.	Parent=comp73580_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	10523956	10524036	.	-	0	Parent=comp73580_c0_seq1.mrna1
Chr1	gffcl	locus	10524527	10525251	.	-	.	ID=RLOC_00005663;geneIDs=comp89856_c0_seq1.path1;transcripts=comp89856_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10524527	10525251	.	-	.	ID=comp89856_c0_seq1.mrna1;geneID=comp89856_c0_seq1.path1;Name=comp89856_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=724;mismatches=1;indels=0;unknowns=0;Target=comp89856_c0_seq1 725 1 .;CDS_Target=comp89856_c0_seq1 197 3 .;locus=RLOC_00005663
Chr1	stalkie_big_nohaplotig	exon	10524527	10525251	99	-	.	Parent=comp89856_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	10525055	10525249	.	-	0	Parent=comp89856_c0_seq1.mrna1
Chr1	gffcl	locus	10542083	10543606	.	+	.	ID=RLOC_00005664;geneIDs=FBgn0052412.1.path1;transcripts=FBgn0052412.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10542083	10543606	.	+	.	ID=FBgn0052412.1.mrna1;geneID=FBgn0052412.1.path1;Name=FBgn0052412.1;Dir=sensecoverage=100.0;identity=99.3;matches=992;mismatches=7;indels=0;unknowns=0;locus=RLOC_00005664
Chr1	stalkie_big_nohaplotig	exon	10542083	10542169	100	+	.	Parent=FBgn0052412.1.mrna1;Target=FBgn0052412.1 1 87 +
Chr1	stalkie_big_nohaplotig	exon	10542225	10542334	100	+	.	Parent=FBgn0052412.1.mrna1;Target=FBgn0052412.1 88 197 +
Chr1	stalkie_big_nohaplotig	exon	10542491	10542776	99	+	.	Parent=FBgn0052412.1.mrna1;Target=FBgn0052412.1 198 483 +
Chr1	stalkie_big_nohaplotig	exon	10542847	10542981	98	+	.	Parent=FBgn0052412.1.mrna1;Target=FBgn0052412.1 484 618 +
Chr1	stalkie_big_nohaplotig	exon	10543118	10543325	99	+	.	Parent=FBgn0052412.1.mrna1;Target=FBgn0052412.1 619 826 +
Chr1	stalkie_big_nohaplotig	exon	10543434	10543606	98	+	.	Parent=FBgn0052412.1.mrna1;Target=FBgn0052412.1 827 999 +
Chr1	stalkie_big_nohaplotig	CDS	10542083	10542169	.	+	0	Parent=FBgn0052412.1.mrna1;Target=FBgn0052412.1 1 87 +
Chr1	stalkie_big_nohaplotig	CDS	10542225	10542334	.	+	0	Parent=FBgn0052412.1.mrna1;Target=FBgn0052412.1 88 197 +
Chr1	stalkie_big_nohaplotig	CDS	10542491	10542776	.	+	1	Parent=FBgn0052412.1.mrna1;Target=FBgn0052412.1 198 483 +
Chr1	stalkie_big_nohaplotig	CDS	10542847	10542981	.	+	0	Parent=FBgn0052412.1.mrna1;Target=FBgn0052412.1 484 618 +
Chr1	stalkie_big_nohaplotig	CDS	10543118	10543325	.	+	0	Parent=FBgn0052412.1.mrna1;Target=FBgn0052412.1 619 826 +
Chr1	stalkie_big_nohaplotig	CDS	10543434	10543606	.	+	2	Parent=FBgn0052412.1.mrna1;Target=FBgn0052412.1 827 999 +
Chr1	gffcl	locus	10548188	10549741	.	+	.	ID=RLOC_00005665;geneIDs=FBgn0024194.1.path1;transcripts=FBgn0024194.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10548188	10549741	.	+	.	ID=FBgn0024194.1.mrna1;geneID=FBgn0024194.1.path1;Name=FBgn0024194.1;Dir=sensecoverage=100.0;identity=99.1;matches=1484;mismatches=13;indels=0;unknowns=0;locus=RLOC_00005665
Chr1	stalkie_big_nohaplotig	exon	10548188	10549450	99	+	.	Parent=FBgn0024194.1.mrna1;Target=FBgn0024194.1 1 1263 +
Chr1	stalkie_big_nohaplotig	exon	10549508	10549741	99	+	.	Parent=FBgn0024194.1.mrna1;Target=FBgn0024194.1 1264 1497 +
Chr1	stalkie_big_nohaplotig	CDS	10548188	10549450	.	+	0	Parent=FBgn0024194.1.mrna1;Target=FBgn0024194.1 1 1263 +
Chr1	stalkie_big_nohaplotig	CDS	10549508	10549741	.	+	0	Parent=FBgn0024194.1.mrna1;Target=FBgn0024194.1 1264 1497 +
Chr1	gffcl	locus	10552594	10553366	.	+	.	ID=RLOC_00005666;geneIDs=FBgn0035422.1.path1;transcripts=FBgn0035422.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10552594	10553366	.	+	.	ID=FBgn0035422.1.mrna1;geneID=FBgn0035422.1.path1;Name=FBgn0035422.1;Dir=sensecoverage=98.6;identity=100.0;matches=417;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005666
Chr1	stalkie_big_nohaplotig	exon	10552594	10552698	100	+	.	Parent=FBgn0035422.1.mrna1;Target=FBgn0035422.1 7 111 +
Chr1	stalkie_big_nohaplotig	exon	10552866	10553105	100	+	.	Parent=FBgn0035422.1.mrna1;Target=FBgn0035422.1 112 351 +
Chr1	stalkie_big_nohaplotig	exon	10553295	10553366	100	+	.	Parent=FBgn0035422.1.mrna1;Target=FBgn0035422.1 352 423 +
Chr1	stalkie_big_nohaplotig	CDS	10552594	10552698	.	+	0	Parent=FBgn0035422.1.mrna1;Target=FBgn0035422.1 7 111 +
Chr1	stalkie_big_nohaplotig	CDS	10552866	10553105	.	+	0	Parent=FBgn0035422.1.mrna1;Target=FBgn0035422.1 112 351 +
Chr1	stalkie_big_nohaplotig	CDS	10553295	10553366	.	+	0	Parent=FBgn0035422.1.mrna1;Target=FBgn0035422.1 352 423 +
Chr1	gffcl	locus	10558044	10558909	.	-	.	ID=RLOC_00005667;geneIDs=FBgn0004895.1.path1;transcripts=FBgn0004895.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10558044	10558909	.	-	.	ID=FBgn0004895.1.mrna1;geneID=FBgn0004895.1.path1;Name=FBgn0004895.1;Dir=sensecoverage=100.0;identity=100.0;matches=801;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005667
Chr1	stalkie_big_nohaplotig	exon	10558044	10558550	100	-	.	Parent=FBgn0004895.1.mrna1;Target=FBgn0004895.1 295 801 +
Chr1	stalkie_big_nohaplotig	exon	10558616	10558909	100	-	.	Parent=FBgn0004895.1.mrna1;Target=FBgn0004895.1 1 294 +
Chr1	stalkie_big_nohaplotig	CDS	10558044	10558550	.	-	0	Parent=FBgn0004895.1.mrna1;Target=FBgn0004895.1 295 801 +
Chr1	stalkie_big_nohaplotig	CDS	10558616	10558909	.	-	0	Parent=FBgn0004895.1.mrna1;Target=FBgn0004895.1 1 294 +
Chr1	gffcl	locus	10685940	10687032	.	-	.	ID=RLOC_00005668;geneIDs=FBgn0035482.1.path1;transcripts=FBgn0035482.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10685940	10687032	.	-	.	ID=FBgn0035482.1.mrna1;geneID=FBgn0035482.1.path1;Name=FBgn0035482.1;Dir=sensecoverage=100.0;identity=99.9;matches=899;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005668
Chr1	stalkie_big_nohaplotig	exon	10685940	10686087	100	-	.	Parent=FBgn0035482.1.mrna1;Target=FBgn0035482.1 753 900 +
Chr1	stalkie_big_nohaplotig	exon	10686162	10686358	100	-	.	Parent=FBgn0035482.1.mrna1;Target=FBgn0035482.1 556 752 +
Chr1	stalkie_big_nohaplotig	exon	10686415	10686650	100	-	.	Parent=FBgn0035482.1.mrna1;Target=FBgn0035482.1 320 555 +
Chr1	stalkie_big_nohaplotig	exon	10686714	10687032	99	-	.	Parent=FBgn0035482.1.mrna1;Target=FBgn0035482.1 1 319 +
Chr1	stalkie_big_nohaplotig	CDS	10685940	10686087	.	-	1	Parent=FBgn0035482.1.mrna1;Target=FBgn0035482.1 753 900 +
Chr1	stalkie_big_nohaplotig	CDS	10686162	10686358	.	-	0	Parent=FBgn0035482.1.mrna1;Target=FBgn0035482.1 556 752 +
Chr1	stalkie_big_nohaplotig	CDS	10686415	10686650	.	-	2	Parent=FBgn0035482.1.mrna1;Target=FBgn0035482.1 320 555 +
Chr1	stalkie_big_nohaplotig	CDS	10686714	10687032	.	-	0	Parent=FBgn0035482.1.mrna1;Target=FBgn0035482.1 1 319 +
Chr1	gffcl	locus	10797674	10800762	.	-	.	ID=RLOC_00005669;geneIDs=ORF144.path1;transcripts=ORF144.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10797674	10800762	.	-	.	ID=ORF144.mrna1;geneID=ORF144.path1;Name=ORF144;Dir=sensecoverage=100.0;identity=96.7;matches=2684;mismatches=91;indels=0;unknowns=0;locus=RLOC_00005669
Chr1	stalkie_big_nohaplotig	exon	10797674	10800312	96	-	.	Parent=ORF144.mrna1;Target=ORF144 137 2775 +
Chr1	stalkie_big_nohaplotig	exon	10800627	10800762	97	-	.	Parent=ORF144.mrna1;Target=ORF144 1 136 +
Chr1	stalkie_big_nohaplotig	CDS	10797674	10800312	.	-	2	Parent=ORF144.mrna1;Target=ORF144 137 2775 +
Chr1	stalkie_big_nohaplotig	CDS	10800627	10800762	.	-	0	Parent=ORF144.mrna1;Target=ORF144 1 136 +
Chr1	gffcl	locus	10810327	10824463	.	+	.	ID=RLOC_00005670;geneIDs=comp116944_c0_seq1.path1;transcripts=comp116944_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10810327	10824463	.	+	.	ID=comp116944_c0_seq1.mrna1;geneID=comp116944_c0_seq1.path1;Name=comp116944_c0_seq1;Dir=indeterminatecoverage=88.7;identity=98.9;matches=467;mismatches=5;indels=0;unknowns=0;locus=RLOC_00005670
Chr1	stalkie_big_nohaplotig	exon	10810327	10810331	100	+	.	Parent=comp116944_c0_seq1.mrna1;Target=comp116944_c0_seq1 65 61 .
Chr1	stalkie_big_nohaplotig	exon	10823997	10824463	98	+	.	Parent=comp116944_c0_seq1.mrna1;Target=comp116944_c0_seq1 532 66 .
Chr1	stalkie_big_nohaplotig	CDS	10810328	10810331	.	+	0	Parent=comp116944_c0_seq1.mrna1;Target=comp116944_c0_seq1 65 62 .
Chr1	stalkie_big_nohaplotig	CDS	10823997	10824070	.	+	2	Parent=comp116944_c0_seq1.mrna1;Target=comp116944_c0_seq1 139 66 .
Chr1	gffcl	locus	10815178	10816936	.	+	.	ID=RLOC_00005671;geneIDs=comp162321_c0_seq1.path1;transcripts=comp162321_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10815178	10816936	.	+	.	ID=comp162321_c0_seq1.mrna1;geneID=comp162321_c0_seq1.path1;Name=comp162321_c0_seq1;Dir=indeterminatecoverage=99.9;identity=90.2;matches=1597;mismatches=47;indels=127;unknowns=0;Target=comp162321_c0_seq1 559 416 .;locus=RLOC_00005671
Chr1	stalkie_big_nohaplotig	exon	10815178	10816415	87	+	.	Parent=comp162321_c0_seq1.mrna1;Target=comp162321_c0_seq1 1315 1 .
Chr1	stalkie_big_nohaplotig	exon	10816428	10816718	96	+	.	Parent=comp162321_c0_seq1.mrna1;Target=comp162321_c0_seq1 1606 1316 .
Chr1	stalkie_big_nohaplotig	exon	10816797	10816936	97	+	.	Parent=comp162321_c0_seq1.mrna1;Target=comp162321_c0_seq1 1746 1607 .
Chr1	stalkie_big_nohaplotig	CDS	10815592	10815735	.	+	0	Parent=comp162321_c0_seq1.mrna1
Chr1	gffcl	locus	10817527	10818019	.	-	.	ID=RLOC_00005672;geneIDs=comp148489_c0_seq1.path1;transcripts=comp148489_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10817527	10818019	.	-	.	ID=comp148489_c0_seq1.mrna1;geneID=comp148489_c0_seq1.path1;Name=comp148489_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.6;matches=476;mismatches=10;indels=7;unknowns=0;Target=comp148489_c0_seq1 486 1 .;CDS_Target=comp148489_c0_seq1 170 84 .;locus=RLOC_00005672
Chr1	stalkie_big_nohaplotig	exon	10817527	10818019	96	-	.	Parent=comp148489_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	10817850	10817936	.	-	0	Parent=comp148489_c0_seq1.mrna1
Chr1	gffcl	locus	10818456	10818894	.	+	.	ID=RLOC_00005673;geneIDs=comp143268_c0_seq1.path1;transcripts=comp143268_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10818456	10818894	.	+	.	ID=comp143268_c0_seq1.mrna1;geneID=comp143268_c0_seq1.path1;Name=comp143268_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=435;mismatches=4;indels=0;unknowns=0;Target=comp143268_c0_seq1 439 1 .;CDS_Target=comp143268_c0_seq1 165 76 .;locus=RLOC_00005673
Chr1	stalkie_big_nohaplotig	exon	10818456	10818894	99	+	.	Parent=comp143268_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	10818531	10818620	.	+	0	Parent=comp143268_c0_seq1.mrna1
Chr1	gffcl	locus	10821651	10841609	.	-	.	ID=RLOC_00005674;geneIDs=comp149407_c0_seq1.path1;transcripts=comp149407_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10821651	10841609	.	-	.	ID=comp149407_c0_seq1.mrna1;geneID=comp149407_c0_seq1.path1;Name=comp149407_c0_seq1;Dir=indeterminatecoverage=57.2;identity=99.3;matches=448;mismatches=3;indels=0;unknowns=0;Target=comp149407_c0_seq1 148 62 .;locus=RLOC_00005674
Chr1	stalkie_big_nohaplotig	exon	10821651	10821658	100	-	.	Parent=comp149407_c0_seq1.mrna1;Target=comp149407_c0_seq1 451 444 .
Chr1	stalkie_big_nohaplotig	exon	10821736	10821740	100	-	.	Parent=comp149407_c0_seq1.mrna1;Target=comp149407_c0_seq1 443 439 .
Chr1	stalkie_big_nohaplotig	exon	10823147	10823153	100	-	.	Parent=comp149407_c0_seq1.mrna1;Target=comp149407_c0_seq1 438 432 .
Chr1	stalkie_big_nohaplotig	exon	10827370	10827373	100	-	.	Parent=comp149407_c0_seq1.mrna1;Target=comp149407_c0_seq1 431 428 .
Chr1	stalkie_big_nohaplotig	exon	10828624	10828632	100	-	.	Parent=comp149407_c0_seq1.mrna1;Target=comp149407_c0_seq1 427 419 .
Chr1	stalkie_big_nohaplotig	exon	10834725	10834731	100	-	.	Parent=comp149407_c0_seq1.mrna1;Target=comp149407_c0_seq1 418 412 .
Chr1	stalkie_big_nohaplotig	exon	10839708	10839710	100	-	.	Parent=comp149407_c0_seq1.mrna1;Target=comp149407_c0_seq1 411 409 .
Chr1	stalkie_big_nohaplotig	exon	10841202	10841609	99	-	.	Parent=comp149407_c0_seq1.mrna1;Target=comp149407_c0_seq1 408 1 .
Chr1	stalkie_big_nohaplotig	CDS	10841462	10841548	.	-	0	Parent=comp149407_c0_seq1.mrna1
Chr1	gffcl	locus	10822295	10823112	.	-	.	ID=RLOC_00005675;geneIDs=comp145487_c0_seq1.path1;transcripts=comp145487_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10822295	10823112	.	-	.	ID=comp145487_c0_seq1.mrna1;geneID=comp145487_c0_seq1.path1;Name=comp145487_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=816;mismatches=2;indels=1;unknowns=0;Target=comp145487_c0_seq1 819 1 .;CDS_Target=comp145487_c0_seq1 262 158 .;locus=RLOC_00005675
Chr1	stalkie_big_nohaplotig	exon	10822295	10823112	99	-	.	Parent=comp145487_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	10822851	10822955	.	-	0	Parent=comp145487_c0_seq1.mrna1
Chr1	gffcl	locus	10827882	11005941	.	-	.	ID=RLOC_00005676;geneIDs=comp151056_c0_seq1.path1;transcripts=comp151056_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10827882	11005941	.	-	.	ID=comp151056_c0_seq1.mrna1;geneID=comp151056_c0_seq1.path1;Name=comp151056_c0_seq1;Dir=indeterminatecoverage=95.3;identity=94.9;matches=611;mismatches=26;indels=7;unknowns=0;locus=RLOC_00005676
Chr1	stalkie_big_nohaplotig	exon	10827882	10828344	99	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 679 217 .
Chr1	stalkie_big_nohaplotig	exon	10840179	10840181	100	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 216 214 .
Chr1	stalkie_big_nohaplotig	exon	10846046	10846050	100	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 213 209 .
Chr1	stalkie_big_nohaplotig	exon	10853848	10853907	59	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 208 143 .
Chr1	stalkie_big_nohaplotig	exon	10855062	10855072	100	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 138 128 .
Chr1	stalkie_big_nohaplotig	exon	10860686	10860690	100	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 127 123 .
Chr1	stalkie_big_nohaplotig	exon	10865787	10865789	100	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 122 120 .
Chr1	stalkie_big_nohaplotig	exon	10870991	10870995	80	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 119 115 .
Chr1	stalkie_big_nohaplotig	exon	10885187	10885191	100	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 114 110 .
Chr1	stalkie_big_nohaplotig	exon	10890295	10890300	100	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 109 104 .
Chr1	stalkie_big_nohaplotig	exon	10894275	10894279	100	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 103 99 .
Chr1	stalkie_big_nohaplotig	exon	10915117	10915120	100	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 98 95 .
Chr1	stalkie_big_nohaplotig	exon	10935499	10935501	100	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 94 92 .
Chr1	stalkie_big_nohaplotig	exon	10941124	10941129	100	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 91 86 .
Chr1	stalkie_big_nohaplotig	exon	10953388	10953394	100	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 85 79 .
Chr1	stalkie_big_nohaplotig	exon	10953823	10953825	100	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 78 76 .
Chr1	stalkie_big_nohaplotig	exon	10961363	10961377	80	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 75 62 .
Chr1	stalkie_big_nohaplotig	exon	10961941	10961942	100	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 61 60 .
Chr1	stalkie_big_nohaplotig	exon	10966716	10966724	100	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 59 51 .
Chr1	stalkie_big_nohaplotig	exon	10979343	10979345	100	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 50 48 .
Chr1	stalkie_big_nohaplotig	exon	10981481	10981482	100	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 47 46 .
Chr1	stalkie_big_nohaplotig	exon	10997130	10997134	100	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 45 41 .
Chr1	stalkie_big_nohaplotig	exon	11005193	11005197	100	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 40 36 .
Chr1	stalkie_big_nohaplotig	exon	11005939	11005941	100	-	.	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 35 33 .
Chr1	stalkie_big_nohaplotig	CDS	10853892	10853907	.	-	0	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 162 143 .
Chr1	stalkie_big_nohaplotig	CDS	10855062	10855072	.	-	2	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 138 128 .
Chr1	stalkie_big_nohaplotig	CDS	10860686	10860690	.	-	1	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 127 123 .
Chr1	stalkie_big_nohaplotig	CDS	10865787	10865789	.	-	1	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 122 120 .
Chr1	stalkie_big_nohaplotig	CDS	10870991	10870995	.	-	0	Parent=comp151056_c0_seq1.mrna1;Target=comp151056_c0_seq1 119 115 .
Chr1	gffcl	locus	10828953	10840982	.	-	.	ID=RLOC_00005677;geneIDs=FBgn0004880.1.path1;transcripts=FBgn0004880.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10828953	10840982	.	-	.	ID=FBgn0004880.1.mrna1;geneID=FBgn0004880.1.path1;Name=FBgn0004880.1;Dir=sensecoverage=100.0;identity=99.9;matches=1940;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005677
Chr1	stalkie_big_nohaplotig	exon	10828953	10830508	99	-	.	Parent=FBgn0004880.1.mrna1;Target=FBgn0004880.1 386 1941 +
Chr1	stalkie_big_nohaplotig	exon	10840598	10840982	100	-	.	Parent=FBgn0004880.1.mrna1;Target=FBgn0004880.1 1 385 +
Chr1	stalkie_big_nohaplotig	CDS	10828953	10830508	.	-	2	Parent=FBgn0004880.1.mrna1;Target=FBgn0004880.1 386 1941 +
Chr1	stalkie_big_nohaplotig	CDS	10840598	10840982	.	-	0	Parent=FBgn0004880.1.mrna1;Target=FBgn0004880.1 1 385 +
Chr1	gffcl	locus	10942512	10948314	.	+	.	ID=RLOC_00005678;geneIDs=comp138553_c0_seq1.path1;transcripts=comp138553_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10942512	10948314	.	+	.	ID=comp138553_c0_seq1.mrna1;geneID=comp138553_c0_seq1.path1;Name=comp138553_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=735;mismatches=4;indels=0;unknowns=0;Target=comp138553_c0_seq1 193 339 +;locus=RLOC_00005678
Chr1	stalkie_big_nohaplotig	exon	10942512	10942926	99	+	.	Parent=comp138553_c0_seq1.mrna1;Target=comp138553_c0_seq1 1 415 +
Chr1	stalkie_big_nohaplotig	exon	10947991	10948314	99	+	.	Parent=comp138553_c0_seq1.mrna1;Target=comp138553_c0_seq1 416 739 +
Chr1	stalkie_big_nohaplotig	CDS	10942704	10942850	.	+	0	Parent=comp138553_c0_seq1.mrna1
Chr1	gffcl	locus	10948420	10977604	.	+	.	ID=RLOC_00005679;geneIDs=FBgn0035481.1.path1;transcripts=FBgn0035481.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10948420	10977604	.	+	.	ID=FBgn0035481.1.mrna1;geneID=FBgn0035481.1.path1;Name=FBgn0035481.1;Dir=sensecoverage=100.0;identity=99.6;matches=1979;mismatches=7;indels=0;unknowns=0;locus=RLOC_00005679
Chr1	stalkie_big_nohaplotig	exon	10948420	10949059	99	+	.	Parent=FBgn0035481.1.mrna1;Target=FBgn0035481.1 1 640 +
Chr1	stalkie_big_nohaplotig	exon	10976259	10977604	99	+	.	Parent=FBgn0035481.1.mrna1;Target=FBgn0035481.1 641 1986 +
Chr1	stalkie_big_nohaplotig	CDS	10948420	10949059	.	+	0	Parent=FBgn0035481.1.mrna1;Target=FBgn0035481.1 1 640 +
Chr1	stalkie_big_nohaplotig	CDS	10976259	10977604	.	+	2	Parent=FBgn0035481.1.mrna1;Target=FBgn0035481.1 641 1986 +
Chr1	gffcl	locus	10983796	10984263	.	+	.	ID=RLOC_00005680;geneIDs=comp118390_c0_seq1.path1;transcripts=comp118390_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10983796	10984263	.	+	.	ID=comp118390_c0_seq1.mrna1;geneID=comp118390_c0_seq1.path1;Name=comp118390_c0_seq1;Dir=indeterminatecoverage=95.9;identity=99.8;matches=467;mismatches=1;indels=0;unknowns=0;Target=comp118390_c0_seq1 468 1 .;CDS_Target=comp118390_c0_seq1 277 170 .;locus=RLOC_00005680
Chr1	stalkie_big_nohaplotig	exon	10983796	10984263	99	+	.	Parent=comp118390_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	10983965	10984072	.	+	0	Parent=comp118390_c0_seq1.mrna1
Chr1	gffcl	locus	10991050	10995523	.	+	.	ID=RLOC_00005681;geneIDs=comp155376_c0_seq1.path1;transcripts=comp155376_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	10991050	10995523	.	+	.	ID=comp155376_c0_seq1.mrna1;geneID=comp155376_c0_seq1.path1;Name=comp155376_c0_seq1;Dir=sensecoverage=97.4;identity=99.0;matches=773;mismatches=8;indels=0;unknowns=0;locus=RLOC_00005681
Chr1	stalkie_big_nohaplotig	exon	10991050	10991289	98	+	.	Parent=comp155376_c0_seq1.mrna1;Target=comp155376_c0_seq1 22 261 +
Chr1	stalkie_big_nohaplotig	exon	10994855	10994997	100	+	.	Parent=comp155376_c0_seq1.mrna1;Target=comp155376_c0_seq1 262 404 +
Chr1	stalkie_big_nohaplotig	exon	10995126	10995523	98	+	.	Parent=comp155376_c0_seq1.mrna1;Target=comp155376_c0_seq1 405 802 +
Chr1	stalkie_big_nohaplotig	CDS	10991226	10991289	.	+	0	Parent=comp155376_c0_seq1.mrna1;Target=comp155376_c0_seq1 198 261 +
Chr1	stalkie_big_nohaplotig	CDS	10994855	10994997	.	+	2	Parent=comp155376_c0_seq1.mrna1;Target=comp155376_c0_seq1 262 404 +
Chr1	stalkie_big_nohaplotig	CDS	10995126	10995377	.	+	0	Parent=comp155376_c0_seq1.mrna1;Target=comp155376_c0_seq1 405 656 +
Chr1	gffcl	locus	11003578	11005124	.	-	.	ID=RLOC_00005682;geneIDs=FBgn0027082.1.path1;transcripts=FBgn0027082.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11003578	11005124	.	-	.	ID=FBgn0027082.1.mrna1;geneID=FBgn0027082.1.path1;Name=FBgn0027082.1;Dir=sensecoverage=100.0;identity=99.2;matches=1301;mismatches=10;indels=0;unknowns=0;locus=RLOC_00005682
Chr1	stalkie_big_nohaplotig	exon	11003578	11003728	98	-	.	Parent=FBgn0027082.1.mrna1;Target=FBgn0027082.1 1161 1311 +
Chr1	stalkie_big_nohaplotig	exon	11003790	11004333	99	-	.	Parent=FBgn0027082.1.mrna1;Target=FBgn0027082.1 617 1160 +
Chr1	stalkie_big_nohaplotig	exon	11004396	11004657	98	-	.	Parent=FBgn0027082.1.mrna1;Target=FBgn0027082.1 355 616 +
Chr1	stalkie_big_nohaplotig	exon	11004717	11004968	98	-	.	Parent=FBgn0027082.1.mrna1;Target=FBgn0027082.1 103 354 +
Chr1	stalkie_big_nohaplotig	exon	11005023	11005124	100	-	.	Parent=FBgn0027082.1.mrna1;Target=FBgn0027082.1 1 102 +
Chr1	stalkie_big_nohaplotig	CDS	11003578	11003728	.	-	1	Parent=FBgn0027082.1.mrna1;Target=FBgn0027082.1 1161 1311 +
Chr1	stalkie_big_nohaplotig	CDS	11003790	11004333	.	-	2	Parent=FBgn0027082.1.mrna1;Target=FBgn0027082.1 617 1160 +
Chr1	stalkie_big_nohaplotig	CDS	11004396	11004657	.	-	0	Parent=FBgn0027082.1.mrna1;Target=FBgn0027082.1 355 616 +
Chr1	stalkie_big_nohaplotig	CDS	11004717	11004968	.	-	0	Parent=FBgn0027082.1.mrna1;Target=FBgn0027082.1 103 354 +
Chr1	stalkie_big_nohaplotig	CDS	11005023	11005124	.	-	0	Parent=FBgn0027082.1.mrna1;Target=FBgn0027082.1 1 102 +
Chr1	gffcl	locus	11006182	11007243	.	+	.	ID=RLOC_00005683;geneIDs=FBgn0259199.1.path1;transcripts=FBgn0259199.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11006182	11007243	.	+	.	ID=FBgn0259199.1.mrna1;geneID=FBgn0259199.1.path1;Name=FBgn0259199.1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1048;mismatches=14;indels=0;unknowns=0;Target=FBgn0259199.1 1062 1 .;locus=RLOC_00005683
Chr1	stalkie_big_nohaplotig	exon	11006182	11007243	98	+	.	Parent=FBgn0259199.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11006182	11007243	.	+	0	Parent=FBgn0259199.1.mrna1
Chr1	gffcl	locus	11007494	11009252	.	+	.	ID=RLOC_00005684;geneIDs=FBgn0259200.1.path1;transcripts=FBgn0259200.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11007494	11009252	.	+	.	ID=FBgn0259200.1.mrna1;geneID=FBgn0259200.1.path1;Name=FBgn0259200.1;Dir=sensecoverage=100.0;identity=99.0;matches=1508;mismatches=10;indels=6;unknowns=0;locus=RLOC_00005684
Chr1	stalkie_big_nohaplotig	exon	11007494	11007742	99	+	.	Parent=FBgn0259200.1.mrna1;Target=FBgn0259200.1 1 249 +
Chr1	stalkie_big_nohaplotig	exon	11007811	11007996	99	+	.	Parent=FBgn0259200.1.mrna1;Target=FBgn0259200.1 250 435 +
Chr1	stalkie_big_nohaplotig	exon	11008111	11008179	100	+	.	Parent=FBgn0259200.1.mrna1;Target=FBgn0259200.1 436 504 +
Chr1	stalkie_big_nohaplotig	exon	11008239	11009252	98	+	.	Parent=FBgn0259200.1.mrna1;Target=FBgn0259200.1 505 1524 +
Chr1	stalkie_big_nohaplotig	CDS	11007494	11007742	.	+	0	Parent=FBgn0259200.1.mrna1;Target=FBgn0259200.1 1 249 +
Chr1	stalkie_big_nohaplotig	CDS	11007811	11007996	.	+	0	Parent=FBgn0259200.1.mrna1;Target=FBgn0259200.1 250 435 +
Chr1	stalkie_big_nohaplotig	CDS	11008111	11008179	.	+	0	Parent=FBgn0259200.1.mrna1;Target=FBgn0259200.1 436 504 +
Chr1	stalkie_big_nohaplotig	CDS	11008239	11009252	.	+	0	Parent=FBgn0259200.1.mrna1;Target=FBgn0259200.1 505 1524 +
Chr1	gffcl	locus	11012238	11016313	.	+	.	ID=RLOC_00005685;geneIDs=FBgn0010424.1.path1;transcripts=FBgn0010424.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11012238	11016313	.	+	.	ID=FBgn0010424.1.mrna1;geneID=FBgn0010424.1.path1;Name=FBgn0010424.1;Dir=sensecoverage=100.0;identity=99.8;matches=467;mismatches=0;indels=1;unknowns=0;locus=RLOC_00005685
Chr1	stalkie_big_nohaplotig	exon	11012238	11012251	100	+	.	Parent=FBgn0010424.1.mrna1;Target=FBgn0010424.1 1 14 +
Chr1	stalkie_big_nohaplotig	exon	11012336	11012366	100	+	.	Parent=FBgn0010424.1.mrna1;Target=FBgn0010424.1 15 45 +
Chr1	stalkie_big_nohaplotig	exon	11012426	11012569	99	+	.	Parent=FBgn0010424.1.mrna1;Target=FBgn0010424.1 46 190 +
Chr1	stalkie_big_nohaplotig	exon	11012632	11012883	100	+	.	Parent=FBgn0010424.1.mrna1;Target=FBgn0010424.1 191 442 +
Chr1	stalkie_big_nohaplotig	exon	11016288	11016313	100	+	.	Parent=FBgn0010424.1.mrna1;Target=FBgn0010424.1 443 468 +
Chr1	stalkie_big_nohaplotig	CDS	11012240	11012251	.	+	0	Parent=FBgn0010424.1.mrna1;Target=FBgn0010424.1 3 14 +
Chr1	stalkie_big_nohaplotig	CDS	11012336	11012366	.	+	0	Parent=FBgn0010424.1.mrna1;Target=FBgn0010424.1 15 45 +
Chr1	stalkie_big_nohaplotig	CDS	11012426	11012471	.	+	2	Parent=FBgn0010424.1.mrna1;Target=FBgn0010424.1 46 92 +
Chr1	gffcl	locus	11017163	11024188	.	+	.	ID=RLOC_00005686;geneIDs=FBgn0036697.2.path1;transcripts=FBgn0036697.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11017163	11024188	.	+	.	ID=FBgn0036697.2.mrna1;geneID=FBgn0036697.2.path1;Name=FBgn0036697.2;Dir=sensecoverage=100.0;identity=100.0;matches=1086;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005686
Chr1	stalkie_big_nohaplotig	exon	11017163	11017305	100	+	.	Parent=FBgn0036697.2.mrna1;Target=FBgn0036697.2 1 143 +
Chr1	stalkie_big_nohaplotig	exon	11021065	11021248	100	+	.	Parent=FBgn0036697.2.mrna1;Target=FBgn0036697.2 144 327 +
Chr1	stalkie_big_nohaplotig	exon	11021317	11021520	100	+	.	Parent=FBgn0036697.2.mrna1;Target=FBgn0036697.2 328 531 +
Chr1	stalkie_big_nohaplotig	exon	11021596	11021753	100	+	.	Parent=FBgn0036697.2.mrna1;Target=FBgn0036697.2 532 689 +
Chr1	stalkie_big_nohaplotig	exon	11021819	11021939	100	+	.	Parent=FBgn0036697.2.mrna1;Target=FBgn0036697.2 690 810 +
Chr1	stalkie_big_nohaplotig	exon	11022001	11022210	100	+	.	Parent=FBgn0036697.2.mrna1;Target=FBgn0036697.2 811 1020 +
Chr1	stalkie_big_nohaplotig	exon	11024123	11024188	100	+	.	Parent=FBgn0036697.2.mrna1;Target=FBgn0036697.2 1021 1086 +
Chr1	stalkie_big_nohaplotig	CDS	11017163	11017305	.	+	0	Parent=FBgn0036697.2.mrna1;Target=FBgn0036697.2 1 143 +
Chr1	stalkie_big_nohaplotig	CDS	11021065	11021248	.	+	1	Parent=FBgn0036697.2.mrna1;Target=FBgn0036697.2 144 327 +
Chr1	stalkie_big_nohaplotig	CDS	11021317	11021520	.	+	0	Parent=FBgn0036697.2.mrna1;Target=FBgn0036697.2 328 531 +
Chr1	stalkie_big_nohaplotig	CDS	11021596	11021753	.	+	0	Parent=FBgn0036697.2.mrna1;Target=FBgn0036697.2 532 689 +
Chr1	stalkie_big_nohaplotig	CDS	11021819	11021939	.	+	1	Parent=FBgn0036697.2.mrna1;Target=FBgn0036697.2 690 810 +
Chr1	stalkie_big_nohaplotig	CDS	11022001	11022210	.	+	0	Parent=FBgn0036697.2.mrna1;Target=FBgn0036697.2 811 1020 +
Chr1	stalkie_big_nohaplotig	CDS	11024123	11024188	.	+	0	Parent=FBgn0036697.2.mrna1;Target=FBgn0036697.2 1021 1086 +
Chr1	gffcl	locus	11024921	11025601	.	+	.	ID=RLOC_00005687;geneIDs=comp145562_c0_seq1.path1;transcripts=comp145562_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11024921	11025601	.	+	.	ID=comp145562_c0_seq1.mrna1;geneID=comp145562_c0_seq1.path1;Name=comp145562_c0_seq1;Dir=indeterminatecoverage=97.1;identity=99.4;matches=677;mismatches=4;indels=0;unknowns=0;Target=comp145562_c0_seq1 681 1 .;CDS_Target=comp145562_c0_seq1 191 99 .;locus=RLOC_00005687
Chr1	stalkie_big_nohaplotig	exon	11024921	11025601	99	+	.	Parent=comp145562_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11025019	11025111	.	+	0	Parent=comp145562_c0_seq1.mrna1
Chr1	gffcl	locus	11026310	11027100	.	+	.	ID=RLOC_00005688;geneIDs=FBgn0031720.1.path1;transcripts=FBgn0031720.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11026310	11027100	.	+	.	ID=FBgn0031720.1.mrna1;geneID=FBgn0031720.1.path1;Name=FBgn0031720.1;Dir=sensecoverage=100.0;identity=99.5;matches=724;mismatches=2;indels=2;unknowns=0;Target=FBgn0031720.1 3 32 +;locus=RLOC_00005688
Chr1	stalkie_big_nohaplotig	exon	11026310	11026644	99	+	.	Parent=FBgn0031720.1.mrna1;Target=FBgn0031720.1 1 333 +
Chr1	stalkie_big_nohaplotig	exon	11026708	11027100	99	+	.	Parent=FBgn0031720.1.mrna1;Target=FBgn0031720.1 334 726 +
Chr1	stalkie_big_nohaplotig	CDS	11026312	11026343	.	+	0	Parent=FBgn0031720.1.mrna1
Chr1	gffcl	locus	11029499	11034731	.	+	.	ID=RLOC_00005689;geneIDs=FBgn0036698.1.path1;transcripts=FBgn0036698.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11029499	11034731	.	+	.	ID=FBgn0036698.1.mrna1;geneID=FBgn0036698.1.path1;Name=FBgn0036698.1;Dir=sensecoverage=100.0;identity=99.1;matches=1228;mismatches=11;indels=0;unknowns=0;locus=RLOC_00005689
Chr1	stalkie_big_nohaplotig	exon	11029499	11029529	96	+	.	Parent=FBgn0036698.1.mrna1;Target=FBgn0036698.1 1 31 +
Chr1	stalkie_big_nohaplotig	exon	11033233	11033403	100	+	.	Parent=FBgn0036698.1.mrna1;Target=FBgn0036698.1 32 202 +
Chr1	stalkie_big_nohaplotig	exon	11033498	11033662	99	+	.	Parent=FBgn0036698.1.mrna1;Target=FBgn0036698.1 203 367 +
Chr1	stalkie_big_nohaplotig	exon	11033724	11033996	98	+	.	Parent=FBgn0036698.1.mrna1;Target=FBgn0036698.1 368 640 +
Chr1	stalkie_big_nohaplotig	exon	11034060	11034212	100	+	.	Parent=FBgn0036698.1.mrna1;Target=FBgn0036698.1 641 793 +
Chr1	stalkie_big_nohaplotig	exon	11034286	11034731	98	+	.	Parent=FBgn0036698.1.mrna1;Target=FBgn0036698.1 794 1239 +
Chr1	stalkie_big_nohaplotig	CDS	11029499	11029529	.	+	0	Parent=FBgn0036698.1.mrna1;Target=FBgn0036698.1 1 31 +
Chr1	stalkie_big_nohaplotig	CDS	11033233	11033403	.	+	2	Parent=FBgn0036698.1.mrna1;Target=FBgn0036698.1 32 202 +
Chr1	stalkie_big_nohaplotig	CDS	11033498	11033662	.	+	2	Parent=FBgn0036698.1.mrna1;Target=FBgn0036698.1 203 367 +
Chr1	stalkie_big_nohaplotig	CDS	11033724	11033996	.	+	2	Parent=FBgn0036698.1.mrna1;Target=FBgn0036698.1 368 640 +
Chr1	stalkie_big_nohaplotig	CDS	11034060	11034212	.	+	2	Parent=FBgn0036698.1.mrna1;Target=FBgn0036698.1 641 793 +
Chr1	stalkie_big_nohaplotig	CDS	11034286	11034731	.	+	2	Parent=FBgn0036698.1.mrna1;Target=FBgn0036698.1 794 1239 +
Chr1	gffcl	locus	11044988	11045707	.	+	.	ID=RLOC_00005690;geneIDs=comp149490_c0_seq1.path1;transcripts=comp149490_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11044988	11045707	.	+	.	ID=comp149490_c0_seq1.mrna1;geneID=comp149490_c0_seq1.path1;Name=comp149490_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.7;matches=682;mismatches=32;indels=6;unknowns=0;Target=comp149490_c0_seq1 714 1 .;CDS_Target=comp149490_c0_seq1 306 229 .;locus=RLOC_00005690
Chr1	stalkie_big_nohaplotig	exon	11044988	11045707	94	+	.	Parent=comp149490_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11045216	11045293	.	+	0	Parent=comp149490_c0_seq1.mrna1
Chr1	gffcl	locus	11047013	11047417	.	-	.	ID=RLOC_00005691;geneIDs=comp53535_c0_seq1.path1;transcripts=comp53535_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11047013	11047417	.	-	.	ID=comp53535_c0_seq1.mrna1;geneID=comp53535_c0_seq1.path1;Name=comp53535_c0_seq1;Dir=indeterminatecoverage=97.4;identity=100.0;matches=405;mismatches=0;indels=0;unknowns=0;Target=comp53535_c0_seq1 416 12 .;CDS_Target=comp53535_c0_seq1 292 200 .;locus=RLOC_00005691
Chr1	stalkie_big_nohaplotig	exon	11047013	11047417	100	-	.	Parent=comp53535_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11047137	11047229	.	-	0	Parent=comp53535_c0_seq1.mrna1
Chr1	gffcl	locus	11048008	11365777	.	-	.	ID=RLOC_00005692;geneIDs=FBgn0260943.1.path1;transcripts=FBgn0260943.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11048008	11365777	.	-	.	ID=FBgn0260943.1.mrna1;geneID=FBgn0260943.1.path1;Name=FBgn0260943.1;Dir=sensecoverage=100.0;identity=100.0;matches=1125;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005692
Chr1	stalkie_big_nohaplotig	exon	11048008	11048040	100	-	.	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 1093 1125 +
Chr1	stalkie_big_nohaplotig	exon	11048513	11048742	100	-	.	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 863 1092 +
Chr1	stalkie_big_nohaplotig	exon	11051678	11051743	100	-	.	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 797 862 +
Chr1	stalkie_big_nohaplotig	exon	11067343	11067426	100	-	.	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 713 796 +
Chr1	stalkie_big_nohaplotig	exon	11069323	11069358	100	-	.	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 677 712 +
Chr1	stalkie_big_nohaplotig	exon	11075236	11075320	100	-	.	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 592 676 +
Chr1	stalkie_big_nohaplotig	exon	11075483	11075565	100	-	.	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 509 591 +
Chr1	stalkie_big_nohaplotig	exon	11090557	11090605	100	-	.	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 460 508 +
Chr1	stalkie_big_nohaplotig	exon	11181556	11181648	100	-	.	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 367 459 +
Chr1	stalkie_big_nohaplotig	exon	11255195	11255236	100	-	.	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 325 366 +
Chr1	stalkie_big_nohaplotig	exon	11260474	11260558	100	-	.	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 240 324 +
Chr1	stalkie_big_nohaplotig	exon	11281051	11281132	100	-	.	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 158 239 +
Chr1	stalkie_big_nohaplotig	exon	11341410	11341450	100	-	.	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 117 157 +
Chr1	stalkie_big_nohaplotig	exon	11365662	11365777	100	-	.	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 1 116 +
Chr1	stalkie_big_nohaplotig	CDS	11048008	11048040	.	-	0	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 1093 1125 +
Chr1	stalkie_big_nohaplotig	CDS	11048513	11048742	.	-	2	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 863 1092 +
Chr1	stalkie_big_nohaplotig	CDS	11051678	11051743	.	-	2	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 797 862 +
Chr1	stalkie_big_nohaplotig	CDS	11067343	11067426	.	-	2	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 713 796 +
Chr1	stalkie_big_nohaplotig	CDS	11069323	11069358	.	-	2	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 677 712 +
Chr1	stalkie_big_nohaplotig	CDS	11075236	11075320	.	-	0	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 592 676 +
Chr1	stalkie_big_nohaplotig	CDS	11075483	11075565	.	-	2	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 509 591 +
Chr1	stalkie_big_nohaplotig	CDS	11090557	11090605	.	-	0	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 460 508 +
Chr1	stalkie_big_nohaplotig	CDS	11181556	11181648	.	-	0	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 367 459 +
Chr1	stalkie_big_nohaplotig	CDS	11255195	11255236	.	-	0	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 325 366 +
Chr1	stalkie_big_nohaplotig	CDS	11260474	11260558	.	-	1	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 240 324 +
Chr1	stalkie_big_nohaplotig	CDS	11281051	11281132	.	-	2	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 158 239 +
Chr1	stalkie_big_nohaplotig	CDS	11341410	11341450	.	-	1	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 117 157 +
Chr1	stalkie_big_nohaplotig	CDS	11365662	11365777	.	-	0	Parent=FBgn0260943.1.mrna1;Target=FBgn0260943.1 1 116 +
Chr1	gffcl	locus	11056876	11057876	.	-	.	ID=RLOC_00005693;geneIDs=comp155756_c0_seq1.path1;transcripts=comp155756_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11056876	11057876	.	-	.	ID=comp155756_c0_seq1.mrna1;geneID=comp155756_c0_seq1.path1;Name=comp155756_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.8;matches=957;mismatches=38;indels=14;unknowns=0;Target=comp155756_c0_seq1 1003 1 .;CDS_Target=comp155756_c0_seq1 142 2 .;locus=RLOC_00005693
Chr1	stalkie_big_nohaplotig	exon	11056876	11057876	94	-	.	Parent=comp155756_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11057735	11057875	.	-	0	Parent=comp155756_c0_seq1.mrna1
Chr1	gffcl	locus	11058171	11058612	.	+	.	ID=RLOC_00005694;geneIDs=comp144552_c0_seq1.path1;transcripts=comp144552_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11058171	11058612	.	+	.	ID=comp144552_c0_seq1.mrna1;geneID=comp144552_c0_seq1.path1;Name=comp144552_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=439;mismatches=3;indels=2;unknowns=0;Target=comp144552_c0_seq1 444 1 .;CDS_Target=comp144552_c0_seq1 272 195 .;locus=RLOC_00005694
Chr1	stalkie_big_nohaplotig	exon	11058171	11058612	98	+	.	Parent=comp144552_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11058364	11058441	.	+	0	Parent=comp144552_c0_seq1.mrna1
Chr1	gffcl	locus	11058627	11059620	.	+	.	ID=RLOC_00005695;geneIDs=comp155721_c0_seq1.path1;transcripts=comp155721_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11058627	11059620	.	+	.	ID=comp155721_c0_seq1.mrna1;geneID=comp155721_c0_seq1.path1;Name=comp155721_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.2;matches=608;mismatches=5;indels=0;unknowns=0;Target=comp155721_c0_seq1 449 339 .;locus=RLOC_00005695
Chr1	stalkie_big_nohaplotig	exon	11058627	11059084	99	+	.	Parent=comp155721_c0_seq1.mrna1;Target=comp155721_c0_seq1 459 2 .
Chr1	stalkie_big_nohaplotig	exon	11059466	11059620	98	+	.	Parent=comp155721_c0_seq1.mrna1;Target=comp155721_c0_seq1 614 460 .
Chr1	stalkie_big_nohaplotig	CDS	11058964	11059074	.	+	0	Parent=comp155721_c0_seq1.mrna1
Chr1	gffcl	locus	11062119	11110719	.	+	.	ID=RLOC_00005696;geneIDs=comp145599_c0_seq1.path1;transcripts=comp145599_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11062119	11110719	.	+	.	ID=comp145599_c0_seq1.mrna1;geneID=comp145599_c0_seq1.path1;Name=comp145599_c0_seq1;Dir=indeterminatecoverage=70.7;identity=100.0;matches=230;mismatches=0;indels=0;unknowns=0;Target=comp145599_c0_seq1 80 15 .;locus=RLOC_00005696
Chr1	stalkie_big_nohaplotig	exon	11062119	11062323	100	+	.	Parent=comp145599_c0_seq1.mrna1;Target=comp145599_c0_seq1 217 13 .
Chr1	stalkie_big_nohaplotig	exon	11065414	11065421	100	+	.	Parent=comp145599_c0_seq1.mrna1;Target=comp145599_c0_seq1 231 224 .
Chr1	stalkie_big_nohaplotig	exon	11069773	11069774	100	+	.	Parent=comp145599_c0_seq1.mrna1;Target=comp145599_c0_seq1 233 232 .
Chr1	stalkie_big_nohaplotig	exon	11076308	11076311	100	+	.	Parent=comp145599_c0_seq1.mrna1;Target=comp145599_c0_seq1 237 234 .
Chr1	stalkie_big_nohaplotig	exon	11110709	11110719	100	+	.	Parent=comp145599_c0_seq1.mrna1;Target=comp145599_c0_seq1 248 238 .
Chr1	stalkie_big_nohaplotig	CDS	11062121	11062186	.	+	0	Parent=comp145599_c0_seq1.mrna1
Chr1	gffcl	locus	11064424	11064944	.	+	.	ID=RLOC_00005697;geneIDs=comp146666_c0_seq1.path1;transcripts=comp146666_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11064424	11064944	.	+	.	ID=comp146666_c0_seq1.mrna1;geneID=comp146666_c0_seq1.path1;Name=comp146666_c0_seq1;Dir=indeterminatecoverage=92.9;identity=97.9;matches=511;mismatches=10;indels=1;unknowns=0;Target=comp146666_c0_seq1 546 25 .;CDS_Target=comp146666_c0_seq1 141 76 .;locus=RLOC_00005697
Chr1	stalkie_big_nohaplotig	exon	11064424	11064944	97	+	.	Parent=comp146666_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11064475	11064540	.	+	0	Parent=comp146666_c0_seq1.mrna1
Chr1	gffcl	locus	11264105	11264938	.	+	.	ID=RLOC_00005699;geneIDs=ORF2611.path1;transcripts=ORF2611.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11264105	11264938	.	+	.	ID=ORF2611.mrna1;geneID=ORF2611.path1;Name=ORF2611;Dir=indeterminatecoverage=100.0;identity=98.7;matches=823;mismatches=11;indels=0;unknowns=0;Target=ORF2611 834 1 .;locus=RLOC_00005699
Chr1	stalkie_big_nohaplotig	exon	11264105	11264938	98	+	.	Parent=ORF2611.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11264105	11264938	.	+	0	Parent=ORF2611.mrna1
Chr1	gffcl	locus	11376991	11379604	.	-	.	ID=RLOC_00005700;geneIDs=FBgn0036702.1.path1;transcripts=FBgn0036702.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11376991	11379604	.	-	.	ID=FBgn0036702.1.mrna1;geneID=FBgn0036702.1.path1;Name=FBgn0036702.1;Dir=sensecoverage=100.0;identity=99.4;matches=2401;mismatches=14;indels=0;unknowns=0;locus=RLOC_00005700
Chr1	stalkie_big_nohaplotig	exon	11376991	11378479	99	-	.	Parent=FBgn0036702.1.mrna1;Target=FBgn0036702.1 927 2415 +
Chr1	stalkie_big_nohaplotig	exon	11378549	11378947	99	-	.	Parent=FBgn0036702.1.mrna1;Target=FBgn0036702.1 528 926 +
Chr1	stalkie_big_nohaplotig	exon	11379021	11379454	100	-	.	Parent=FBgn0036702.1.mrna1;Target=FBgn0036702.1 94 527 +
Chr1	stalkie_big_nohaplotig	exon	11379512	11379604	100	-	.	Parent=FBgn0036702.1.mrna1;Target=FBgn0036702.1 1 93 +
Chr1	stalkie_big_nohaplotig	CDS	11376991	11378479	.	-	1	Parent=FBgn0036702.1.mrna1;Target=FBgn0036702.1 927 2415 +
Chr1	stalkie_big_nohaplotig	CDS	11378549	11378947	.	-	1	Parent=FBgn0036702.1.mrna1;Target=FBgn0036702.1 528 926 +
Chr1	stalkie_big_nohaplotig	CDS	11379021	11379454	.	-	0	Parent=FBgn0036702.1.mrna1;Target=FBgn0036702.1 94 527 +
Chr1	stalkie_big_nohaplotig	CDS	11379512	11379604	.	-	0	Parent=FBgn0036702.1.mrna1;Target=FBgn0036702.1 1 93 +
Chr1	gffcl	locus	11385515	11385934	.	+	.	ID=RLOC_00005701;geneIDs=comp50740_c0_seq1.path1;transcripts=comp50740_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11385515	11385934	.	+	.	ID=comp50740_c0_seq1.mrna1;geneID=comp50740_c0_seq1.path1;Name=comp50740_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=413;mismatches=7;indels=0;unknowns=0;Target=comp50740_c0_seq1 420 1 .;CDS_Target=comp50740_c0_seq1 60 1 .;locus=RLOC_00005701
Chr1	stalkie_big_nohaplotig	exon	11385515	11385934	98	+	.	Parent=comp50740_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11385515	11385574	.	+	0	Parent=comp50740_c0_seq1.mrna1
Chr1	gffcl	locus	11386785	11391809	.	+	.	ID=RLOC_00005702;geneIDs=FBgn0263352.1.path1;transcripts=FBgn0263352.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11386785	11391809	.	+	.	ID=FBgn0263352.1.mrna1;geneID=FBgn0263352.1.path1;Name=FBgn0263352.1;Dir=sensecoverage=100.0;identity=99.6;matches=2950;mismatches=2;indels=9;unknowns=0;locus=RLOC_00005702
Chr1	stalkie_big_nohaplotig	exon	11386785	11386863	100	+	.	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 1 79 +
Chr1	stalkie_big_nohaplotig	exon	11388177	11388535	100	+	.	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 80 438 +
Chr1	stalkie_big_nohaplotig	exon	11388608	11388787	100	+	.	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 439 618 +
Chr1	stalkie_big_nohaplotig	exon	11388868	11389082	99	+	.	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 619 833 +
Chr1	stalkie_big_nohaplotig	exon	11389173	11389380	100	+	.	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 834 1041 +
Chr1	stalkie_big_nohaplotig	exon	11389448	11389657	100	+	.	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 1042 1251 +
Chr1	stalkie_big_nohaplotig	exon	11389723	11389956	100	+	.	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 1252 1485 +
Chr1	stalkie_big_nohaplotig	exon	11390028	11390181	100	+	.	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 1486 1639 +
Chr1	stalkie_big_nohaplotig	exon	11390248	11390417	100	+	.	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 1640 1809 +
Chr1	stalkie_big_nohaplotig	exon	11390495	11391445	99	+	.	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 1810 2769 +
Chr1	stalkie_big_nohaplotig	exon	11391541	11391718	100	+	.	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 2770 2947 +
Chr1	stalkie_big_nohaplotig	exon	11391796	11391809	100	+	.	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 2948 2961 +
Chr1	stalkie_big_nohaplotig	CDS	11386785	11386863	.	+	0	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 1 79 +
Chr1	stalkie_big_nohaplotig	CDS	11388177	11388535	.	+	2	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 80 438 +
Chr1	stalkie_big_nohaplotig	CDS	11388608	11388787	.	+	0	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 439 618 +
Chr1	stalkie_big_nohaplotig	CDS	11388868	11389082	.	+	0	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 619 833 +
Chr1	stalkie_big_nohaplotig	CDS	11389173	11389380	.	+	1	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 834 1041 +
Chr1	stalkie_big_nohaplotig	CDS	11389448	11389657	.	+	0	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 1042 1251 +
Chr1	stalkie_big_nohaplotig	CDS	11389723	11389956	.	+	0	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 1252 1485 +
Chr1	stalkie_big_nohaplotig	CDS	11390028	11390181	.	+	0	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 1486 1639 +
Chr1	stalkie_big_nohaplotig	CDS	11390248	11390417	.	+	2	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 1640 1809 +
Chr1	stalkie_big_nohaplotig	CDS	11390495	11391445	.	+	0	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 1810 2769 +
Chr1	stalkie_big_nohaplotig	CDS	11391541	11391718	.	+	0	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 2770 2947 +
Chr1	stalkie_big_nohaplotig	CDS	11391796	11391809	.	+	2	Parent=FBgn0263352.1.mrna1;Target=FBgn0263352.1 2948 2961 +
Chr1	stalkie_big_nohaplotig	mRNA	11397909	11405214	.	-	.	ID=FBgn0020224.mrna1;geneID=FBgn0020224.path1;Name=FBgn0020224;Dir=sensecoverage=100.0;identity=99.9;matches=1345;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005703
Chr1	stalkie_big_nohaplotig	exon	11397909	11399200	99	-	.	Parent=FBgn0020224.mrna1;Target=FBgn0020224 1293 1 .
Chr1	stalkie_big_nohaplotig	exon	11403516	11403650	100	-	.	Parent=FBgn0020224.mrna1;Target=FBgn0020224 1213 1347 +
Chr1	stalkie_big_nohaplotig	exon	11403720	11403841	100	-	.	Parent=FBgn0020224.mrna1;Target=FBgn0020224 1091 1212 +
Chr1	stalkie_big_nohaplotig	exon	11403908	11404032	100	-	.	Parent=FBgn0020224.mrna1;Target=FBgn0020224 966 1090 +
Chr1	stalkie_big_nohaplotig	exon	11404103	11404219	100	-	.	Parent=FBgn0020224.mrna1;Target=FBgn0020224 849 965 +
Chr1	stalkie_big_nohaplotig	exon	11404282	11404572	99	-	.	Parent=FBgn0020224.mrna1;Target=FBgn0020224 558 848 +
Chr1	stalkie_big_nohaplotig	exon	11404658	11405214	100	-	.	Parent=FBgn0020224.mrna1;Target=FBgn0020224 1 557 +
Chr1	stalkie_big_nohaplotig	CDS	11397909	11398973	99	-	0	Parent=FBgn0020224.mrna1;Target=FBgn0020224 1293 229 .
Chr1	stalkie_big_nohaplotig	CDS	11403516	11403650	100	-	0	Parent=FBgn0020224.mrna1;Target=FBgn0020224 1213 1347 +
Chr1	stalkie_big_nohaplotig	CDS	11403720	11403841	100	-	1	Parent=FBgn0020224.mrna1;Target=FBgn0020224 1091 1212 +
Chr1	stalkie_big_nohaplotig	CDS	11403908	11404032	100	-	2	Parent=FBgn0020224.mrna1;Target=FBgn0020224 966 1090 +
Chr1	stalkie_big_nohaplotig	CDS	11404103	11404219	100	-	2	Parent=FBgn0020224.mrna1;Target=FBgn0020224 849 965 +
Chr1	stalkie_big_nohaplotig	CDS	11404282	11404572	99	-	2	Parent=FBgn0020224.mrna1;Target=FBgn0020224 558 848 +
Chr1	stalkie_big_nohaplotig	CDS	11404658	11405214	100	-	0	Parent=FBgn0020224.mrna1;Target=FBgn0020224 1 557 +
Chr1	stalkie_big_nohaplotig	mRNA	11399972	11402188	.	+	.	ID=comp163698_c1_seq1.mrna1;geneID=comp163698_c1_seq1.path1;Name=comp163698_c1_seq1;Dir=indeterminatecoverage=93.5;identity=96.0;matches=2165;mismatches=36;indels=54;unknowns=0;Target=comp163698_c1_seq1 2394 156 .;CDS_Target=comp163698_c1_seq1 333 157 .;locus=RLOC_00005703
Chr1	stalkie_big_nohaplotig	exon	11399972	11402188	96	+	.	Parent=comp163698_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11399973	11400149	.	+	0	Parent=comp163698_c1_seq1.mrna1
Chr1	gffcl	locus	11417013	11434173	.	+	.	ID=RLOC_00005704;geneIDs=FBgn0052354.1.path1;transcripts=FBgn0052354.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11417013	11434173	.	+	.	ID=FBgn0052354.1.mrna1;geneID=FBgn0052354.1.path1;Name=FBgn0052354.1;Dir=sensecoverage=100.0;identity=99.9;matches=1870;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005704
Chr1	stalkie_big_nohaplotig	exon	11417013	11417166	100	+	.	Parent=FBgn0052354.1.mrna1;Target=FBgn0052354.1 1 154 +
Chr1	stalkie_big_nohaplotig	exon	11432125	11432483	100	+	.	Parent=FBgn0052354.1.mrna1;Target=FBgn0052354.1 155 513 +
Chr1	stalkie_big_nohaplotig	exon	11432589	11432695	100	+	.	Parent=FBgn0052354.1.mrna1;Target=FBgn0052354.1 514 620 +
Chr1	stalkie_big_nohaplotig	exon	11432763	11433281	99	+	.	Parent=FBgn0052354.1.mrna1;Target=FBgn0052354.1 621 1139 +
Chr1	stalkie_big_nohaplotig	exon	11433371	11433568	100	+	.	Parent=FBgn0052354.1.mrna1;Target=FBgn0052354.1 1140 1337 +
Chr1	stalkie_big_nohaplotig	exon	11433639	11434173	99	+	.	Parent=FBgn0052354.1.mrna1;Target=FBgn0052354.1 1338 1872 +
Chr1	stalkie_big_nohaplotig	CDS	11417013	11417166	.	+	0	Parent=FBgn0052354.1.mrna1;Target=FBgn0052354.1 1 154 +
Chr1	stalkie_big_nohaplotig	CDS	11432125	11432483	.	+	2	Parent=FBgn0052354.1.mrna1;Target=FBgn0052354.1 155 513 +
Chr1	stalkie_big_nohaplotig	CDS	11432589	11432695	.	+	0	Parent=FBgn0052354.1.mrna1;Target=FBgn0052354.1 514 620 +
Chr1	stalkie_big_nohaplotig	CDS	11432763	11433281	.	+	1	Parent=FBgn0052354.1.mrna1;Target=FBgn0052354.1 621 1139 +
Chr1	stalkie_big_nohaplotig	CDS	11433371	11433568	.	+	1	Parent=FBgn0052354.1.mrna1;Target=FBgn0052354.1 1140 1337 +
Chr1	stalkie_big_nohaplotig	CDS	11433639	11434173	.	+	1	Parent=FBgn0052354.1.mrna1;Target=FBgn0052354.1 1338 1872 +
Chr1	gffcl	locus	11434691	11441816	.	-	.	ID=RLOC_00005705;geneIDs=FBgn0035892.1.path1;transcripts=FBgn0035892.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11434691	11441816	.	-	.	ID=FBgn0035892.1.mrna1;geneID=FBgn0035892.1.path1;Name=FBgn0035892.1;Dir=sensecoverage=100.0;identity=99.2;matches=2128;mismatches=17;indels=0;unknowns=0;locus=RLOC_00005705
Chr1	stalkie_big_nohaplotig	exon	11434691	11434790	100	-	.	Parent=FBgn0035892.1.mrna1;Target=FBgn0035892.1 2046 2145 +
Chr1	stalkie_big_nohaplotig	exon	11436590	11436723	98	-	.	Parent=FBgn0035892.1.mrna1;Target=FBgn0035892.1 1912 2045 +
Chr1	stalkie_big_nohaplotig	exon	11436787	11437109	99	-	.	Parent=FBgn0035892.1.mrna1;Target=FBgn0035892.1 1589 1911 +
Chr1	stalkie_big_nohaplotig	exon	11437177	11437465	99	-	.	Parent=FBgn0035892.1.mrna1;Target=FBgn0035892.1 1300 1588 +
Chr1	stalkie_big_nohaplotig	exon	11437520	11437690	98	-	.	Parent=FBgn0035892.1.mrna1;Target=FBgn0035892.1 1129 1299 +
Chr1	stalkie_big_nohaplotig	exon	11437748	11438036	98	-	.	Parent=FBgn0035892.1.mrna1;Target=FBgn0035892.1 840 1128 +
Chr1	stalkie_big_nohaplotig	exon	11438356	11438417	100	-	.	Parent=FBgn0035892.1.mrna1;Target=FBgn0035892.1 778 839 +
Chr1	stalkie_big_nohaplotig	exon	11440917	11441434	99	-	.	Parent=FBgn0035892.1.mrna1;Target=FBgn0035892.1 260 777 +
Chr1	stalkie_big_nohaplotig	exon	11441500	11441665	98	-	.	Parent=FBgn0035892.1.mrna1;Target=FBgn0035892.1 94 259 +
Chr1	stalkie_big_nohaplotig	exon	11441724	11441816	98	-	.	Parent=FBgn0035892.1.mrna1;Target=FBgn0035892.1 1 93 +
Chr1	stalkie_big_nohaplotig	CDS	11434691	11434790	.	-	1	Parent=FBgn0035892.1.mrna1;Target=FBgn0035892.1 2046 2145 +
Chr1	stalkie_big_nohaplotig	CDS	11436590	11436723	.	-	0	Parent=FBgn0035892.1.mrna1;Target=FBgn0035892.1 1912 2045 +
Chr1	stalkie_big_nohaplotig	CDS	11436787	11437109	.	-	2	Parent=FBgn0035892.1.mrna1;Target=FBgn0035892.1 1589 1911 +
Chr1	stalkie_big_nohaplotig	CDS	11437177	11437465	.	-	0	Parent=FBgn0035892.1.mrna1;Target=FBgn0035892.1 1300 1588 +
Chr1	stalkie_big_nohaplotig	CDS	11437520	11437690	.	-	0	Parent=FBgn0035892.1.mrna1;Target=FBgn0035892.1 1129 1299 +
Chr1	stalkie_big_nohaplotig	CDS	11437748	11438036	.	-	1	Parent=FBgn0035892.1.mrna1;Target=FBgn0035892.1 840 1128 +
Chr1	stalkie_big_nohaplotig	CDS	11438356	11438417	.	-	0	Parent=FBgn0035892.1.mrna1;Target=FBgn0035892.1 778 839 +
Chr1	stalkie_big_nohaplotig	CDS	11440917	11441434	.	-	2	Parent=FBgn0035892.1.mrna1;Target=FBgn0035892.1 260 777 +
Chr1	stalkie_big_nohaplotig	CDS	11441500	11441665	.	-	0	Parent=FBgn0035892.1.mrna1;Target=FBgn0035892.1 94 259 +
Chr1	stalkie_big_nohaplotig	CDS	11441724	11441816	.	-	0	Parent=FBgn0035892.1.mrna1;Target=FBgn0035892.1 1 93 +
Chr1	gffcl	locus	11443853	11447796	.	+	.	ID=RLOC_00005706;geneIDs=FBgn0035720.1.path1;transcripts=FBgn0035720.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11443853	11447796	.	+	.	ID=FBgn0035720.1.mrna1;geneID=FBgn0035720.1.path1;Name=FBgn0035720.1;Dir=sensecoverage=100.0;identity=99.6;matches=2163;mismatches=3;indels=6;unknowns=0;locus=RLOC_00005706
Chr1	stalkie_big_nohaplotig	exon	11443853	11445182	99	+	.	Parent=FBgn0035720.1.mrna1;Target=FBgn0035720.1 1 1330 +
Chr1	stalkie_big_nohaplotig	exon	11446890	11447068	100	+	.	Parent=FBgn0035720.1.mrna1;Target=FBgn0035720.1 1331 1509 +
Chr1	stalkie_big_nohaplotig	exon	11447140	11447796	99	+	.	Parent=FBgn0035720.1.mrna1;Target=FBgn0035720.1 1510 2172 +
Chr1	stalkie_big_nohaplotig	CDS	11443853	11445182	.	+	0	Parent=FBgn0035720.1.mrna1;Target=FBgn0035720.1 1 1330 +
Chr1	stalkie_big_nohaplotig	CDS	11446890	11447068	.	+	2	Parent=FBgn0035720.1.mrna1;Target=FBgn0035720.1 1331 1509 +
Chr1	stalkie_big_nohaplotig	CDS	11447140	11447796	.	+	0	Parent=FBgn0035720.1.mrna1;Target=FBgn0035720.1 1510 2172 +
Chr1	gffcl	locus	11452653	11452893	.	-	.	ID=RLOC_00005707;geneIDs=comp116137_c0_seq1.path1;transcripts=comp116137_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11452653	11452893	.	-	.	ID=comp116137_c0_seq1.mrna1;geneID=comp116137_c0_seq1.path1;Name=comp116137_c0_seq1;Dir=indeterminatecoverage=99.6;identity=97.6;matches=241;mismatches=0;indels=6;unknowns=0;Target=comp116137_c0_seq1 247 1 .;CDS_Target=comp116137_c0_seq1 195 103 .;locus=RLOC_00005707
Chr1	stalkie_big_nohaplotig	exon	11452653	11452893	97	-	.	Parent=comp116137_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11452705	11452791	.	-	0	Parent=comp116137_c0_seq1.mrna1
Chr1	gffcl	locus	11457096	11464437	.	-	.	ID=RLOC_00005708;geneIDs=FBgn0035719.1.path1;transcripts=FBgn0035719.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11457096	11464437	.	-	.	ID=FBgn0035719.1.mrna1;geneID=FBgn0035719.1.path1;Name=FBgn0035719.1;Dir=sensecoverage=100.0;identity=99.5;matches=1107;mismatches=0;indels=6;unknowns=0;locus=RLOC_00005708
Chr1	stalkie_big_nohaplotig	exon	11457096	11457881	99	-	.	Parent=FBgn0035719.1.mrna1;Target=FBgn0035719.1 328 1107 +
Chr1	stalkie_big_nohaplotig	exon	11457944	11458001	100	-	.	Parent=FBgn0035719.1.mrna1;Target=FBgn0035719.1 270 327 +
Chr1	stalkie_big_nohaplotig	exon	11458180	11458363	100	-	.	Parent=FBgn0035719.1.mrna1;Target=FBgn0035719.1 86 269 +
Chr1	stalkie_big_nohaplotig	exon	11464353	11464437	100	-	.	Parent=FBgn0035719.1.mrna1;Target=FBgn0035719.1 1 85 +
Chr1	stalkie_big_nohaplotig	CDS	11457096	11457881	.	-	0	Parent=FBgn0035719.1.mrna1;Target=FBgn0035719.1 328 1107 +
Chr1	stalkie_big_nohaplotig	CDS	11457944	11458001	.	-	1	Parent=FBgn0035719.1.mrna1;Target=FBgn0035719.1 270 327 +
Chr1	stalkie_big_nohaplotig	CDS	11458180	11458363	.	-	2	Parent=FBgn0035719.1.mrna1;Target=FBgn0035719.1 86 269 +
Chr1	stalkie_big_nohaplotig	CDS	11464353	11464437	.	-	0	Parent=FBgn0035719.1.mrna1;Target=FBgn0035719.1 1 85 +
Chr1	gffcl	locus	11465400	11466192	.	-	.	ID=RLOC_00005709;geneIDs=comp140912_c1_seq1.path1;transcripts=comp140912_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11465400	11466192	.	-	.	ID=comp140912_c1_seq1.mrna1;geneID=comp140912_c1_seq1.path1;Name=comp140912_c1_seq1;Dir=indeterminatecoverage=99.9;identity=99.6;matches=791;mismatches=1;indels=2;unknowns=0;Target=comp140912_c1_seq1 794 2 .;CDS_Target=comp140912_c1_seq1 82 2 .;locus=RLOC_00005709
Chr1	stalkie_big_nohaplotig	exon	11465400	11466192	99	-	.	Parent=comp140912_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11466111	11466192	.	-	0	Parent=comp140912_c1_seq1.mrna1
Chr1	gffcl	locus	11545308	11548313	.	+	.	ID=RLOC_00005711;geneIDs=FBgn0041194.1.path1;transcripts=FBgn0041194.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11545308	11548313	.	+	.	ID=FBgn0041194.1.mrna1;geneID=FBgn0041194.1.path1;Name=FBgn0041194.1;Dir=sensecoverage=100.0;identity=99.4;matches=1503;mismatches=9;indels=0;unknowns=0;locus=RLOC_00005711
Chr1	stalkie_big_nohaplotig	exon	11545308	11545398	95	+	.	Parent=FBgn0041194.1.mrna1;Target=FBgn0041194.1 1 91 +
Chr1	stalkie_big_nohaplotig	exon	11545462	11545673	99	+	.	Parent=FBgn0041194.1.mrna1;Target=FBgn0041194.1 92 303 +
Chr1	stalkie_big_nohaplotig	exon	11547034	11547966	99	+	.	Parent=FBgn0041194.1.mrna1;Target=FBgn0041194.1 304 1236 +
Chr1	stalkie_big_nohaplotig	exon	11548038	11548313	99	+	.	Parent=FBgn0041194.1.mrna1;Target=FBgn0041194.1 1237 1512 +
Chr1	stalkie_big_nohaplotig	CDS	11545308	11545398	.	+	0	Parent=FBgn0041194.1.mrna1;Target=FBgn0041194.1 1 91 +
Chr1	stalkie_big_nohaplotig	CDS	11545462	11545673	.	+	2	Parent=FBgn0041194.1.mrna1;Target=FBgn0041194.1 92 303 +
Chr1	stalkie_big_nohaplotig	CDS	11547034	11547966	.	+	0	Parent=FBgn0041194.1.mrna1;Target=FBgn0041194.1 304 1236 +
Chr1	stalkie_big_nohaplotig	CDS	11548038	11548313	.	+	0	Parent=FBgn0041194.1.mrna1;Target=FBgn0041194.1 1237 1512 +
Chr1	gffcl	locus	11570833	11571585	.	+	.	ID=RLOC_00005712;geneIDs=comp139075_c0_seq1.path2;transcripts=comp139075_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	11570833	11571585	.	+	.	ID=comp139075_c0_seq1.mrna2;geneID=comp139075_c0_seq1.path2;Name=comp139075_c0_seq1;Dir=sensecoverage=92.2;identity=98.4;matches=683;mismatches=11;indels=0;unknowns=0;Target=comp139075_c0_seq1 642 749 +;locus=RLOC_00005712
Chr1	stalkie_big_nohaplotig	exon	11570833	11571112	98	+	.	Parent=comp139075_c0_seq1.mrna2;Target=comp139075_c0_seq1 60 339 +
Chr1	stalkie_big_nohaplotig	exon	11571172	11571585	98	+	.	Parent=comp139075_c0_seq1.mrna2;Target=comp139075_c0_seq1 340 753 +
Chr1	stalkie_big_nohaplotig	CDS	11571474	11571581	.	+	0	Parent=comp139075_c0_seq1.mrna2
Chr1	gffcl	locus	11616239	11616898	.	-	.	ID=RLOC_00005713;geneIDs=comp151381_c0_seq1.path1;transcripts=comp151381_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11616239	11616898	.	-	.	ID=comp151381_c0_seq1.mrna1;geneID=comp151381_c0_seq1.path1;Name=comp151381_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=648;mismatches=12;indels=4;unknowns=0;Target=comp151381_c0_seq1 664 1 .;CDS_Target=comp151381_c0_seq1 156 1 .;locus=RLOC_00005713
Chr1	stalkie_big_nohaplotig	exon	11616239	11616898	97	-	.	Parent=comp151381_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11616743	11616898	.	-	0	Parent=comp151381_c0_seq1.mrna1
Chr1	gffcl	locus	11642127	11642918	.	+	.	ID=RLOC_00005714;geneIDs=comp1358220_c0_seq1.path1;transcripts=comp1358220_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11642127	11642918	.	+	.	ID=comp1358220_c0_seq1.mrna1;geneID=comp1358220_c0_seq1.path1;Name=comp1358220_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.5;matches=780;mismatches=12;indels=0;unknowns=0;Target=comp1358220_c0_seq1 792 1 .;CDS_Target=comp1358220_c0_seq1 267 151 .;locus=RLOC_00005714
Chr1	stalkie_big_nohaplotig	exon	11642127	11642918	98	+	.	Parent=comp1358220_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11642277	11642393	.	+	0	Parent=comp1358220_c0_seq1.mrna1
Chr1	gffcl	locus	11658250	11660358	.	-	.	ID=RLOC_00005715;geneIDs=ORF629.path1;transcripts=ORF629.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11658250	11660358	.	-	.	ID=ORF629.mrna1;geneID=ORF629.path1;Name=ORF629;Dir=sensecoverage=99.9;identity=99.2;matches=1573;mismatches=12;indels=0;unknowns=0;locus=RLOC_00005715
Chr1	stalkie_big_nohaplotig	exon	11658250	11658998	99	-	.	Parent=ORF629.mrna1;Target=ORF629 839 1587 +
Chr1	stalkie_big_nohaplotig	exon	11659076	11659555	98	-	.	Parent=ORF629.mrna1;Target=ORF629 359 838 +
Chr1	stalkie_big_nohaplotig	exon	11659792	11659898	100	-	.	Parent=ORF629.mrna1;Target=ORF629 252 358 +
Chr1	stalkie_big_nohaplotig	exon	11660110	11660358	98	-	.	Parent=ORF629.mrna1;Target=ORF629 3 251 +
Chr1	stalkie_big_nohaplotig	CDS	11658250	11658998	.	-	2	Parent=ORF629.mrna1;Target=ORF629 839 1587 +
Chr1	stalkie_big_nohaplotig	CDS	11659076	11659555	.	-	2	Parent=ORF629.mrna1;Target=ORF629 359 838 +
Chr1	stalkie_big_nohaplotig	CDS	11659792	11659898	.	-	1	Parent=ORF629.mrna1;Target=ORF629 252 358 +
Chr1	stalkie_big_nohaplotig	CDS	11660110	11660357	.	-	0	Parent=ORF629.mrna1;Target=ORF629 4 251 +
Chr1	gffcl	locus	11668858	11670252	.	+	.	ID=RLOC_00005716;geneIDs=FBgn0027338.3.path1;transcripts=FBgn0027338.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11668858	11670252	.	+	.	ID=FBgn0027338.3.mrna1;geneID=FBgn0027338.3.path1;Name=FBgn0027338.3;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1388;mismatches=7;indels=0;unknowns=0;Target=FBgn0027338.3 1395 1 .;locus=RLOC_00005716
Chr1	stalkie_big_nohaplotig	exon	11668858	11670252	99	+	.	Parent=FBgn0027338.3.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11668858	11670252	.	+	0	Parent=FBgn0027338.3.mrna1
Chr1	gffcl	locus	11674741	11676809	.	-	.	ID=RLOC_00005717;geneIDs=FBgn0010497.1.path1;transcripts=FBgn0010497.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11674741	11676809	.	-	.	ID=FBgn0010497.1.mrna1;geneID=FBgn0010497.1.path1;Name=FBgn0010497.1;Dir=sensecoverage=100.0;identity=99.5;matches=1493;mismatches=6;indels=1;unknowns=0;Target=FBgn0010497.1 3 26 +;locus=RLOC_00005717
Chr1	stalkie_big_nohaplotig	exon	11674741	11674887	100	-	.	Parent=FBgn0010497.1.mrna1;Target=FBgn0010497.1 1354 1500 +
Chr1	stalkie_big_nohaplotig	exon	11674948	11675186	99	-	.	Parent=FBgn0010497.1.mrna1;Target=FBgn0010497.1 1115 1353 +
Chr1	stalkie_big_nohaplotig	exon	11675265	11675649	99	-	.	Parent=FBgn0010497.1.mrna1;Target=FBgn0010497.1 730 1114 +
Chr1	stalkie_big_nohaplotig	exon	11675747	11676196	99	-	.	Parent=FBgn0010497.1.mrna1;Target=FBgn0010497.1 280 729 +
Chr1	stalkie_big_nohaplotig	exon	11676320	11676504	100	-	.	Parent=FBgn0010497.1.mrna1;Target=FBgn0010497.1 95 279 +
Chr1	stalkie_big_nohaplotig	exon	11676717	11676809	98	-	.	Parent=FBgn0010497.1.mrna1;Target=FBgn0010497.1 1 94 +
Chr1	stalkie_big_nohaplotig	CDS	11676785	11676807	.	-	0	Parent=FBgn0010497.1.mrna1
Chr1	gffcl	locus	11704969	11706274	.	-	.	ID=RLOC_00005718;geneIDs=comp151513_c1_seq1.path1;transcripts=comp151513_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11704969	11706274	.	-	.	ID=comp151513_c1_seq1.mrna1;geneID=comp151513_c1_seq1.path1;Name=comp151513_c1_seq1;Dir=indeterminatecoverage=99.5;identity=98.9;matches=1298;mismatches=8;indels=7;unknowns=0;Target=comp151513_c1_seq1 1318 6 .;CDS_Target=comp151513_c1_seq1 1317 1189 .;locus=RLOC_00005718
Chr1	stalkie_big_nohaplotig	exon	11704969	11706274	98	-	.	Parent=comp151513_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11704970	11705098	.	-	0	Parent=comp151513_c1_seq1.mrna1
Chr1	gffcl	locus	11711907	11714069	.	-	.	ID=RLOC_00005719;geneIDs=comp159290_c0_seq1.path1;transcripts=comp159290_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11711907	11714069	.	-	.	ID=comp159290_c0_seq1.mrna1;geneID=comp159290_c0_seq1.path1;Name=comp159290_c0_seq1;Dir=sensecoverage=99.9;identity=97.6;matches=1777;mismatches=14;indels=29;unknowns=0;Target=comp159290_c0_seq1 1195 1302 +;locus=RLOC_00005719
Chr1	stalkie_big_nohaplotig	exon	11711907	11712393	97	-	.	Parent=comp159290_c0_seq1.mrna1;Target=comp159290_c0_seq1 1325 1815 +
Chr1	stalkie_big_nohaplotig	exon	11712760	11714069	97	-	.	Parent=comp159290_c0_seq1.mrna1;Target=comp159290_c0_seq1 2 1324 +
Chr1	stalkie_big_nohaplotig	CDS	11712782	11712889	.	-	0	Parent=comp159290_c0_seq1.mrna1
Chr1	gffcl	locus	11715488	11742852	.	-	.	ID=RLOC_00005720;geneIDs=comp105181_c0_seq1.path1;transcripts=comp105181_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11715488	11742852	.	-	.	ID=comp105181_c0_seq1.mrna1;geneID=comp105181_c0_seq1.path1;Name=comp105181_c0_seq1;Dir=indeterminatecoverage=89.0;identity=96.8;matches=760;mismatches=19;indels=6;unknowns=0;locus=RLOC_00005720
Chr1	stalkie_big_nohaplotig	exon	11715488	11715546	98	-	.	Parent=comp105181_c0_seq1.mrna1;Target=comp105181_c0_seq1 911 853 .
Chr1	stalkie_big_nohaplotig	exon	11715581	11716262	96	-	.	Parent=comp105181_c0_seq1.mrna1;Target=comp105181_c0_seq1 829 142 .
Chr1	stalkie_big_nohaplotig	exon	11720818	11720825	100	-	.	Parent=comp105181_c0_seq1.mrna1;Target=comp105181_c0_seq1 141 134 .
Chr1	stalkie_big_nohaplotig	exon	11728953	11728954	100	-	.	Parent=comp105181_c0_seq1.mrna1;Target=comp105181_c0_seq1 133 132 .
Chr1	stalkie_big_nohaplotig	exon	11731497	11731499	100	-	.	Parent=comp105181_c0_seq1.mrna1;Target=comp105181_c0_seq1 131 129 .
Chr1	stalkie_big_nohaplotig	exon	11731926	11731932	100	-	.	Parent=comp105181_c0_seq1.mrna1;Target=comp105181_c0_seq1 128 122 .
Chr1	stalkie_big_nohaplotig	exon	11736310	11736317	100	-	.	Parent=comp105181_c0_seq1.mrna1;Target=comp105181_c0_seq1 117 110 .
Chr1	stalkie_big_nohaplotig	exon	11742843	11742852	90	-	.	Parent=comp105181_c0_seq1.mrna1;Target=comp105181_c0_seq1 109 100 .
Chr1	stalkie_big_nohaplotig	CDS	11720818	11720825	.	-	0	Parent=comp105181_c0_seq1.mrna1;Target=comp105181_c0_seq1 141 134 .
Chr1	stalkie_big_nohaplotig	CDS	11728953	11728954	.	-	2	Parent=comp105181_c0_seq1.mrna1;Target=comp105181_c0_seq1 133 132 .
Chr1	stalkie_big_nohaplotig	CDS	11731497	11731499	.	-	2	Parent=comp105181_c0_seq1.mrna1;Target=comp105181_c0_seq1 131 129 .
Chr1	stalkie_big_nohaplotig	CDS	11731926	11731932	.	-	0	Parent=comp105181_c0_seq1.mrna1;Target=comp105181_c0_seq1 128 122 .
Chr1	stalkie_big_nohaplotig	CDS	11736310	11736317	.	-	2	Parent=comp105181_c0_seq1.mrna1;Target=comp105181_c0_seq1 117 110 .
Chr1	stalkie_big_nohaplotig	CDS	11742843	11742852	.	-	0	Parent=comp105181_c0_seq1.mrna1;Target=comp105181_c0_seq1 109 100 .
Chr1	gffcl	locus	11734671	11735136	.	+	.	ID=RLOC_00005721;geneIDs=comp112968_c0_seq1.path1;transcripts=comp112968_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11734671	11735136	.	+	.	ID=comp112968_c0_seq1.mrna1;geneID=comp112968_c0_seq1.path1;Name=comp112968_c0_seq1;Dir=antisensecoverage=100.0;identity=97.8;matches=394;mismatches=2;indels=7;unknowns=0;Target=comp112968_c0_seq1 176 355 .;locus=RLOC_00005721
Chr1	stalkie_big_nohaplotig	exon	11734671	11734962	97	+	.	Parent=comp112968_c0_seq1.mrna1;Target=comp112968_c0_seq1 111 396 -
Chr1	stalkie_big_nohaplotig	exon	11735026	11735136	99	+	.	Parent=comp112968_c0_seq1.mrna1;Target=comp112968_c0_seq1 1 110 -
Chr1	stalkie_big_nohaplotig	CDS	11734712	11734897	.	+	0	Parent=comp112968_c0_seq1.mrna1
Chr1	gffcl	locus	11789352	11789542	.	+	.	ID=RLOC_00005722;geneIDs=comp116335_c0_seq1.path1;transcripts=comp116335_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11789352	11789542	.	+	.	ID=comp116335_c0_seq1.mrna1;geneID=comp116335_c0_seq1.path1;Name=comp116335_c0_seq1;Dir=indeterminatecoverage=88.5;identity=99.5;matches=191;mismatches=0;indels=1;unknowns=0;Target=comp116335_c0_seq1 217 26 .;CDS_Target=comp116335_c0_seq1 175 83 .;locus=RLOC_00005722
Chr1	stalkie_big_nohaplotig	exon	11789352	11789542	99	+	.	Parent=comp116335_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11789409	11789500	.	+	0	Parent=comp116335_c0_seq1.mrna1
Chr1	gffcl	locus	11790155	11791201	.	-	.	ID=RLOC_00005723;geneIDs=comp149109_c0_seq1.path2;transcripts=comp149109_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	11790155	11791201	.	-	.	ID=comp149109_c0_seq1.mrna2;geneID=comp149109_c0_seq1.path2;Name=comp149109_c0_seq1;Dir=indeterminatecoverage=64.1;identity=99.8;matches=1046;mismatches=1;indels=1;unknowns=0;Target=comp149109_c0_seq1 1636 589 .;CDS_Target=comp149109_c0_seq1 1018 815 .;locus=RLOC_00005723
Chr1	stalkie_big_nohaplotig	exon	11790155	11791201	99	-	.	Parent=comp149109_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	11790773	11790976	.	-	0	Parent=comp149109_c0_seq1.mrna2
Chr1	gffcl	locus	11792384	11793868	.	-	.	ID=RLOC_00005724;geneIDs=FBgn0086680.1.path1;transcripts=FBgn0086680.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11792384	11793868	.	-	.	ID=FBgn0086680.1.mrna1;geneID=FBgn0086680.1.path1;Name=FBgn0086680.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1483;mismatches=2;indels=0;unknowns=0;Target=FBgn0086680.1 1485 1 .;locus=RLOC_00005724
Chr1	stalkie_big_nohaplotig	exon	11792384	11793868	99	-	.	Parent=FBgn0086680.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11792384	11793868	.	-	0	Parent=FBgn0086680.1.mrna1
Chr1	gffcl	locus	11810212	11812047	.	+	.	ID=RLOC_00005725;geneIDs=FBgn0261387.3.path1;transcripts=FBgn0261387.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11810212	11812047	.	+	.	ID=FBgn0261387.3.mrna1;geneID=FBgn0261387.3.path1;Name=FBgn0261387.3;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1816;mismatches=20;indels=0;unknowns=0;Target=FBgn0261387.3 1836 1 .;locus=RLOC_00005725
Chr1	stalkie_big_nohaplotig	exon	11810212	11812047	98	+	.	Parent=FBgn0261387.3.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11810212	11812047	.	+	0	Parent=FBgn0261387.3.mrna1
Chr1	gffcl	locus	11855630	11869982	.	+	.	ID=RLOC_00005726;geneIDs=FBgn0052392.1.path1;transcripts=FBgn0052392.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11855630	11869982	.	+	.	ID=FBgn0052392.1.mrna1;geneID=FBgn0052392.1.path1;Name=FBgn0052392.1;Dir=sensecoverage=100.0;identity=99.8;matches=1261;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005726
Chr1	stalkie_big_nohaplotig	exon	11855630	11855874	99	+	.	Parent=FBgn0052392.1.mrna1;Target=FBgn0052392.1 1 245 +
Chr1	stalkie_big_nohaplotig	exon	11867565	11867652	100	+	.	Parent=FBgn0052392.1.mrna1;Target=FBgn0052392.1 246 333 +
Chr1	stalkie_big_nohaplotig	exon	11868985	11869394	99	+	.	Parent=FBgn0052392.1.mrna1;Target=FBgn0052392.1 334 743 +
Chr1	stalkie_big_nohaplotig	exon	11869463	11869982	100	+	.	Parent=FBgn0052392.1.mrna1;Target=FBgn0052392.1 744 1263 +
Chr1	stalkie_big_nohaplotig	CDS	11855630	11855874	.	+	0	Parent=FBgn0052392.1.mrna1;Target=FBgn0052392.1 1 245 +
Chr1	stalkie_big_nohaplotig	CDS	11867565	11867652	.	+	1	Parent=FBgn0052392.1.mrna1;Target=FBgn0052392.1 246 333 +
Chr1	stalkie_big_nohaplotig	CDS	11868985	11869394	.	+	0	Parent=FBgn0052392.1.mrna1;Target=FBgn0052392.1 334 743 +
Chr1	stalkie_big_nohaplotig	CDS	11869463	11869982	.	+	1	Parent=FBgn0052392.1.mrna1;Target=FBgn0052392.1 744 1263 +
Chr1	gffcl	locus	11872353	11873171	.	+	.	ID=RLOC_00005727;geneIDs=FBgn0035714.1.path1;transcripts=FBgn0035714.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11872353	11873171	.	+	.	ID=FBgn0035714.1.mrna1;geneID=FBgn0035714.1.path1;Name=FBgn0035714.1;Dir=sensecoverage=100.0;identity=99.7;matches=763;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005727
Chr1	stalkie_big_nohaplotig	exon	11872353	11872492	100	+	.	Parent=FBgn0035714.1.mrna1;Target=FBgn0035714.1 1 140 +
Chr1	stalkie_big_nohaplotig	exon	11872547	11873171	99	+	.	Parent=FBgn0035714.1.mrna1;Target=FBgn0035714.1 141 765 +
Chr1	stalkie_big_nohaplotig	CDS	11872353	11872492	.	+	0	Parent=FBgn0035714.1.mrna1;Target=FBgn0035714.1 1 140 +
Chr1	stalkie_big_nohaplotig	CDS	11872547	11873171	.	+	1	Parent=FBgn0035714.1.mrna1;Target=FBgn0035714.1 141 765 +
Chr1	gffcl	locus	11873335	11875372	.	.	.	ID=RLOC_00005728;geneIDs=FBgn0035715.1.path1,comp134857_c0_seq1.path1;transcripts=FBgn0035715.1.mrna1,comp134857_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11873335	11875372	.	-	.	ID=FBgn0035715.1.mrna1;geneID=FBgn0035715.1.path1;Name=FBgn0035715.1;Dir=sensecoverage=100.0;identity=99.7;matches=1220;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005728
Chr1	stalkie_big_nohaplotig	exon	11873335	11873538	100	-	.	Parent=FBgn0035715.1.mrna1;Target=FBgn0035715.1 1021 1224 +
Chr1	stalkie_big_nohaplotig	exon	11873624	11873686	100	-	.	Parent=FBgn0035715.1.mrna1;Target=FBgn0035715.1 958 1020 +
Chr1	stalkie_big_nohaplotig	exon	11873982	11874047	100	-	.	Parent=FBgn0035715.1.mrna1;Target=FBgn0035715.1 892 957 +
Chr1	stalkie_big_nohaplotig	exon	11874163	11874467	99	-	.	Parent=FBgn0035715.1.mrna1;Target=FBgn0035715.1 587 891 +
Chr1	stalkie_big_nohaplotig	exon	11874718	11875109	99	-	.	Parent=FBgn0035715.1.mrna1;Target=FBgn0035715.1 195 586 +
Chr1	stalkie_big_nohaplotig	exon	11875179	11875372	99	-	.	Parent=FBgn0035715.1.mrna1;Target=FBgn0035715.1 1 194 +
Chr1	stalkie_big_nohaplotig	CDS	11873335	11873538	.	-	0	Parent=FBgn0035715.1.mrna1;Target=FBgn0035715.1 1021 1224 +
Chr1	stalkie_big_nohaplotig	CDS	11873624	11873686	.	-	0	Parent=FBgn0035715.1.mrna1;Target=FBgn0035715.1 958 1020 +
Chr1	stalkie_big_nohaplotig	CDS	11873982	11874047	.	-	0	Parent=FBgn0035715.1.mrna1;Target=FBgn0035715.1 892 957 +
Chr1	stalkie_big_nohaplotig	CDS	11874163	11874467	.	-	2	Parent=FBgn0035715.1.mrna1;Target=FBgn0035715.1 587 891 +
Chr1	stalkie_big_nohaplotig	CDS	11874718	11875109	.	-	1	Parent=FBgn0035715.1.mrna1;Target=FBgn0035715.1 195 586 +
Chr1	stalkie_big_nohaplotig	CDS	11875179	11875372	.	-	0	Parent=FBgn0035715.1.mrna1;Target=FBgn0035715.1 1 194 +
Chr1	stalkie_big_nohaplotig	mRNA	11873664	11874005	.	+	.	ID=comp134857_c0_seq1.mrna1;geneID=comp134857_c0_seq1.path1;Name=comp134857_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=342;mismatches=0;indels=0;unknowns=0;Target=comp134857_c0_seq1 342 1 .;CDS_Target=comp134857_c0_seq1 80 3 .;locus=RLOC_00005728
Chr1	stalkie_big_nohaplotig	exon	11873664	11874005	100	+	.	Parent=comp134857_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11873666	11873743	.	+	0	Parent=comp134857_c0_seq1.mrna1
Chr1	gffcl	locus	11877958	11885152	.	+	.	ID=RLOC_00005729;geneIDs=FBgn0035713.1.path1;transcripts=FBgn0035713.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11877958	11885152	.	+	.	ID=FBgn0035713.1.mrna1;geneID=FBgn0035713.1.path1;Name=FBgn0035713.1;Dir=sensecoverage=100.0;identity=99.8;matches=4971;mismatches=12;indels=0;unknowns=0;locus=RLOC_00005729
Chr1	stalkie_big_nohaplotig	exon	11877958	11878009	100	+	.	Parent=FBgn0035713.1.mrna1;Target=FBgn0035713.1 1 52 +
Chr1	stalkie_big_nohaplotig	exon	11878554	11878636	98	+	.	Parent=FBgn0035713.1.mrna1;Target=FBgn0035713.1 53 135 +
Chr1	stalkie_big_nohaplotig	exon	11878820	11879398	99	+	.	Parent=FBgn0035713.1.mrna1;Target=FBgn0035713.1 136 714 +
Chr1	stalkie_big_nohaplotig	exon	11879463	11881664	99	+	.	Parent=FBgn0035713.1.mrna1;Target=FBgn0035713.1 715 2916 +
Chr1	stalkie_big_nohaplotig	exon	11881725	11881824	100	+	.	Parent=FBgn0035713.1.mrna1;Target=FBgn0035713.1 2917 3016 +
Chr1	stalkie_big_nohaplotig	exon	11882678	11882790	100	+	.	Parent=FBgn0035713.1.mrna1;Target=FBgn0035713.1 3017 3129 +
Chr1	stalkie_big_nohaplotig	exon	11882851	11883070	100	+	.	Parent=FBgn0035713.1.mrna1;Target=FBgn0035713.1 3130 3349 +
Chr1	stalkie_big_nohaplotig	exon	11883152	11883347	99	+	.	Parent=FBgn0035713.1.mrna1;Target=FBgn0035713.1 3350 3545 +
Chr1	stalkie_big_nohaplotig	exon	11883404	11883876	99	+	.	Parent=FBgn0035713.1.mrna1;Target=FBgn0035713.1 3546 4018 +
Chr1	stalkie_big_nohaplotig	exon	11884129	11884868	99	+	.	Parent=FBgn0035713.1.mrna1;Target=FBgn0035713.1 4019 4758 +
Chr1	stalkie_big_nohaplotig	exon	11884928	11885152	100	+	.	Parent=FBgn0035713.1.mrna1;Target=FBgn0035713.1 4759 4983 +
Chr1	stalkie_big_nohaplotig	CDS	11877958	11878009	.	+	0	Parent=FBgn0035713.1.mrna1;Target=FBgn0035713.1 1 52 +
Chr1	stalkie_big_nohaplotig	CDS	11878554	11878636	.	+	2	Parent=FBgn0035713.1.mrna1;Target=FBgn0035713.1 53 135 +
Chr1	stalkie_big_nohaplotig	CDS	11878820	11879398	.	+	0	Parent=FBgn0035713.1.mrna1;Target=FBgn0035713.1 136 714 +
Chr1	stalkie_big_nohaplotig	CDS	11879463	11881664	.	+	0	Parent=FBgn0035713.1.mrna1;Target=FBgn0035713.1 715 2916 +
Chr1	stalkie_big_nohaplotig	CDS	11881725	11881824	.	+	0	Parent=FBgn0035713.1.mrna1;Target=FBgn0035713.1 2917 3016 +
Chr1	stalkie_big_nohaplotig	CDS	11882678	11882790	.	+	2	Parent=FBgn0035713.1.mrna1;Target=FBgn0035713.1 3017 3129 +
Chr1	stalkie_big_nohaplotig	CDS	11882851	11883070	.	+	0	Parent=FBgn0035713.1.mrna1;Target=FBgn0035713.1 3130 3349 +
Chr1	stalkie_big_nohaplotig	CDS	11883152	11883347	.	+	2	Parent=FBgn0035713.1.mrna1;Target=FBgn0035713.1 3350 3545 +
Chr1	stalkie_big_nohaplotig	CDS	11883404	11883876	.	+	1	Parent=FBgn0035713.1.mrna1;Target=FBgn0035713.1 3546 4018 +
Chr1	stalkie_big_nohaplotig	CDS	11884129	11884868	.	+	2	Parent=FBgn0035713.1.mrna1;Target=FBgn0035713.1 4019 4758 +
Chr1	stalkie_big_nohaplotig	CDS	11884928	11885152	.	+	0	Parent=FBgn0035713.1.mrna1;Target=FBgn0035713.1 4759 4983 +
Chr1	gffcl	locus	11890693	11891696	.	.	.	ID=RLOC_00005730;geneIDs=FBgn0010408.1.path1,comp135780_c0_seq1.path1;transcripts=FBgn0010408.1.mrna1,comp135780_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11890693	11891696	.	+	.	ID=FBgn0010408.1.mrna1;geneID=FBgn0010408.1.path1;Name=FBgn0010408.1;Dir=sensecoverage=100.0;identity=99.7;matches=595;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005730
Chr1	stalkie_big_nohaplotig	exon	11890693	11890927	99	+	.	Parent=FBgn0010408.1.mrna1;Target=FBgn0010408.1 1 235 +
Chr1	stalkie_big_nohaplotig	exon	11891055	11891241	100	+	.	Parent=FBgn0010408.1.mrna1;Target=FBgn0010408.1 236 422 +
Chr1	stalkie_big_nohaplotig	exon	11891522	11891696	99	+	.	Parent=FBgn0010408.1.mrna1;Target=FBgn0010408.1 423 597 +
Chr1	stalkie_big_nohaplotig	CDS	11890693	11890927	.	+	0	Parent=FBgn0010408.1.mrna1;Target=FBgn0010408.1 1 235 +
Chr1	stalkie_big_nohaplotig	CDS	11891055	11891241	.	+	2	Parent=FBgn0010408.1.mrna1;Target=FBgn0010408.1 236 422 +
Chr1	stalkie_big_nohaplotig	CDS	11891522	11891696	.	+	1	Parent=FBgn0010408.1.mrna1;Target=FBgn0010408.1 423 597 +
Chr1	stalkie_big_nohaplotig	mRNA	11891242	11891543	.	-	.	ID=comp135780_c0_seq1.mrna1;geneID=comp135780_c0_seq1.path1;Name=comp135780_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=300;mismatches=2;indels=0;unknowns=0;Target=comp135780_c0_seq1 302 1 .;CDS_Target=comp135780_c0_seq1 108 1 .;locus=RLOC_00005730
Chr1	stalkie_big_nohaplotig	exon	11891242	11891543	99	-	.	Parent=comp135780_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11891436	11891543	.	-	0	Parent=comp135780_c0_seq1.mrna1
Chr1	gffcl	locus	11893011	11897418	.	+	.	ID=RLOC_00005731;geneIDs=FBgn0035771.1.path1;transcripts=FBgn0035771.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11893011	11897418	.	+	.	ID=FBgn0035771.1.mrna1;geneID=FBgn0035771.1.path1;Name=FBgn0035771.1;Dir=sensecoverage=100.0;identity=99.9;matches=2256;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005731
Chr1	stalkie_big_nohaplotig	exon	11893011	11893143	100	+	.	Parent=FBgn0035771.1.mrna1;Target=FBgn0035771.1 1 133 +
Chr1	stalkie_big_nohaplotig	exon	11893484	11894193	99	+	.	Parent=FBgn0035771.1.mrna1;Target=FBgn0035771.1 134 843 +
Chr1	stalkie_big_nohaplotig	exon	11894250	11894769	100	+	.	Parent=FBgn0035771.1.mrna1;Target=FBgn0035771.1 844 1363 +
Chr1	stalkie_big_nohaplotig	exon	11894838	11894964	100	+	.	Parent=FBgn0035771.1.mrna1;Target=FBgn0035771.1 1364 1490 +
Chr1	stalkie_big_nohaplotig	exon	11895058	11895650	99	+	.	Parent=FBgn0035771.1.mrna1;Target=FBgn0035771.1 1491 2083 +
Chr1	stalkie_big_nohaplotig	exon	11897243	11897418	100	+	.	Parent=FBgn0035771.1.mrna1;Target=FBgn0035771.1 2084 2259 +
Chr1	stalkie_big_nohaplotig	CDS	11893011	11893143	.	+	0	Parent=FBgn0035771.1.mrna1;Target=FBgn0035771.1 1 133 +
Chr1	stalkie_big_nohaplotig	CDS	11893484	11894193	.	+	2	Parent=FBgn0035771.1.mrna1;Target=FBgn0035771.1 134 843 +
Chr1	stalkie_big_nohaplotig	CDS	11894250	11894769	.	+	0	Parent=FBgn0035771.1.mrna1;Target=FBgn0035771.1 844 1363 +
Chr1	stalkie_big_nohaplotig	CDS	11894838	11894964	.	+	2	Parent=FBgn0035771.1.mrna1;Target=FBgn0035771.1 1364 1490 +
Chr1	stalkie_big_nohaplotig	CDS	11895058	11895650	.	+	1	Parent=FBgn0035771.1.mrna1;Target=FBgn0035771.1 1491 2083 +
Chr1	stalkie_big_nohaplotig	CDS	11897243	11897418	.	+	2	Parent=FBgn0035771.1.mrna1;Target=FBgn0035771.1 2084 2259 +
Chr1	gffcl	locus	11908181	11909578	.	-	.	ID=RLOC_00005732;geneIDs=FBgn0082598.1.path1;transcripts=FBgn0082598.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11908181	11909578	.	-	.	ID=FBgn0082598.1.mrna1;geneID=FBgn0082598.1.path1;Name=FBgn0082598.1;Dir=sensecoverage=98.3;identity=99.8;matches=630;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005732
Chr1	stalkie_big_nohaplotig	exon	11908181	11908337	100	-	.	Parent=FBgn0082598.1.mrna1;Target=FBgn0082598.1 478 634 +
Chr1	stalkie_big_nohaplotig	exon	11909033	11909232	99	-	.	Parent=FBgn0082598.1.mrna1;Target=FBgn0082598.1 278 477 +
Chr1	stalkie_big_nohaplotig	exon	11909305	11909578	100	-	.	Parent=FBgn0082598.1.mrna1;Target=FBgn0082598.1 4 277 +
Chr1	stalkie_big_nohaplotig	CDS	11908182	11908337	.	-	0	Parent=FBgn0082598.1.mrna1;Target=FBgn0082598.1 478 633 +
Chr1	stalkie_big_nohaplotig	CDS	11909033	11909232	.	-	2	Parent=FBgn0082598.1.mrna1;Target=FBgn0082598.1 278 477 +
Chr1	stalkie_big_nohaplotig	CDS	11909305	11909578	.	-	0	Parent=FBgn0082598.1.mrna1;Target=FBgn0082598.1 4 277 +
Chr1	gffcl	locus	11927974	11933635	.	+	.	ID=RLOC_00005733;geneIDs=FBgn0036684.1.path1;transcripts=FBgn0036684.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11927974	11933635	.	+	.	ID=FBgn0036684.1.mrna1;geneID=FBgn0036684.1.path1;Name=FBgn0036684.1;Dir=sensecoverage=94.0;identity=99.8;matches=3999;mismatches=10;indels=0;unknowns=0;locus=RLOC_00005733
Chr1	stalkie_big_nohaplotig	exon	11927974	11928238	99	+	.	Parent=FBgn0036684.1.mrna1;Target=FBgn0036684.1 258 522 +
Chr1	stalkie_big_nohaplotig	exon	11929585	11930610	99	+	.	Parent=FBgn0036684.1.mrna1;Target=FBgn0036684.1 523 1548 +
Chr1	stalkie_big_nohaplotig	exon	11930686	11930873	100	+	.	Parent=FBgn0036684.1.mrna1;Target=FBgn0036684.1 1549 1736 +
Chr1	stalkie_big_nohaplotig	exon	11930935	11932990	99	+	.	Parent=FBgn0036684.1.mrna1;Target=FBgn0036684.1 1737 3792 +
Chr1	stalkie_big_nohaplotig	exon	11933065	11933334	100	+	.	Parent=FBgn0036684.1.mrna1;Target=FBgn0036684.1 3793 4062 +
Chr1	stalkie_big_nohaplotig	exon	11933432	11933635	100	+	.	Parent=FBgn0036684.1.mrna1;Target=FBgn0036684.1 4063 4266 +
Chr1	stalkie_big_nohaplotig	CDS	11927975	11928238	.	+	0	Parent=FBgn0036684.1.mrna1;Target=FBgn0036684.1 259 522 +
Chr1	stalkie_big_nohaplotig	CDS	11929585	11930610	.	+	0	Parent=FBgn0036684.1.mrna1;Target=FBgn0036684.1 523 1548 +
Chr1	stalkie_big_nohaplotig	CDS	11930686	11930873	.	+	0	Parent=FBgn0036684.1.mrna1;Target=FBgn0036684.1 1549 1736 +
Chr1	stalkie_big_nohaplotig	CDS	11930935	11932990	.	+	1	Parent=FBgn0036684.1.mrna1;Target=FBgn0036684.1 1737 3792 +
Chr1	stalkie_big_nohaplotig	CDS	11933065	11933334	.	+	0	Parent=FBgn0036684.1.mrna1;Target=FBgn0036684.1 3793 4062 +
Chr1	stalkie_big_nohaplotig	CDS	11933432	11933635	.	+	0	Parent=FBgn0036684.1.mrna1;Target=FBgn0036684.1 4063 4266 +
Chr1	gffcl	locus	11945551	11947515	.	-	.	ID=RLOC_00005735;geneIDs=FBgn0036685.1.path1;transcripts=FBgn0036685.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11945551	11947515	.	-	.	ID=FBgn0036685.1.mrna1;geneID=FBgn0036685.1.path1;Name=FBgn0036685.1;Dir=sensecoverage=99.7;identity=99.9;matches=1542;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005735
Chr1	stalkie_big_nohaplotig	exon	11945551	11946012	100	-	.	Parent=FBgn0036685.1.mrna1;Target=FBgn0036685.1 1087 1548 +
Chr1	stalkie_big_nohaplotig	exon	11946079	11946345	100	-	.	Parent=FBgn0036685.1.mrna1;Target=FBgn0036685.1 820 1086 +
Chr1	stalkie_big_nohaplotig	exon	11946504	11946956	100	-	.	Parent=FBgn0036685.1.mrna1;Target=FBgn0036685.1 367 819 +
Chr1	stalkie_big_nohaplotig	exon	11947022	11947171	99	-	.	Parent=FBgn0036685.1.mrna1;Target=FBgn0036685.1 217 366 +
Chr1	stalkie_big_nohaplotig	exon	11947237	11947327	100	-	.	Parent=FBgn0036685.1.mrna1;Target=FBgn0036685.1 126 216 +
Chr1	stalkie_big_nohaplotig	exon	11947396	11947515	100	-	.	Parent=FBgn0036685.1.mrna1;Target=FBgn0036685.1 6 125 +
Chr1	stalkie_big_nohaplotig	CDS	11945551	11946012	.	-	0	Parent=FBgn0036685.1.mrna1;Target=FBgn0036685.1 1087 1548 +
Chr1	stalkie_big_nohaplotig	CDS	11946079	11946345	.	-	0	Parent=FBgn0036685.1.mrna1;Target=FBgn0036685.1 820 1086 +
Chr1	stalkie_big_nohaplotig	CDS	11946504	11946956	.	-	0	Parent=FBgn0036685.1.mrna1;Target=FBgn0036685.1 367 819 +
Chr1	stalkie_big_nohaplotig	CDS	11947022	11947171	.	-	0	Parent=FBgn0036685.1.mrna1;Target=FBgn0036685.1 217 366 +
Chr1	stalkie_big_nohaplotig	CDS	11947237	11947327	.	-	1	Parent=FBgn0036685.1.mrna1;Target=FBgn0036685.1 126 216 +
Chr1	stalkie_big_nohaplotig	CDS	11947396	11947514	.	-	0	Parent=FBgn0036685.1.mrna1;Target=FBgn0036685.1 7 125 +
Chr1	gffcl	locus	11950135	11953925	.	+	.	ID=RLOC_00005736;geneIDs=FBgn0036686.1.path1;transcripts=FBgn0036686.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11950135	11953925	.	+	.	ID=FBgn0036686.1.mrna1;geneID=FBgn0036686.1.path1;Name=FBgn0036686.1;Dir=sensecoverage=100.0;identity=99.7;matches=3464;mismatches=10;indels=0;unknowns=0;locus=RLOC_00005736
Chr1	stalkie_big_nohaplotig	exon	11950135	11951772	99	+	.	Parent=FBgn0036686.1.mrna1;Target=FBgn0036686.1 1 1638 +
Chr1	stalkie_big_nohaplotig	exon	11951830	11951974	98	+	.	Parent=FBgn0036686.1.mrna1;Target=FBgn0036686.1 1639 1783 +
Chr1	stalkie_big_nohaplotig	exon	11952179	11952706	99	+	.	Parent=FBgn0036686.1.mrna1;Target=FBgn0036686.1 1784 2311 +
Chr1	stalkie_big_nohaplotig	exon	11952763	11953925	99	+	.	Parent=FBgn0036686.1.mrna1;Target=FBgn0036686.1 2312 3474 +
Chr1	stalkie_big_nohaplotig	CDS	11950135	11951772	.	+	0	Parent=FBgn0036686.1.mrna1;Target=FBgn0036686.1 1 1638 +
Chr1	stalkie_big_nohaplotig	CDS	11951830	11951974	.	+	0	Parent=FBgn0036686.1.mrna1;Target=FBgn0036686.1 1639 1783 +
Chr1	stalkie_big_nohaplotig	CDS	11952179	11952706	.	+	2	Parent=FBgn0036686.1.mrna1;Target=FBgn0036686.1 1784 2311 +
Chr1	stalkie_big_nohaplotig	CDS	11952763	11953925	.	+	2	Parent=FBgn0036686.1.mrna1;Target=FBgn0036686.1 2312 3474 +
Chr1	gffcl	locus	11954155	11956265	.	-	.	ID=RLOC_00005737;geneIDs=FBgn0036687.1.path1;transcripts=FBgn0036687.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11954155	11956265	.	-	.	ID=FBgn0036687.1.mrna1;geneID=FBgn0036687.1.path1;Name=FBgn0036687.1;Dir=sensecoverage=100.0;identity=99.9;matches=1628;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005737
Chr1	stalkie_big_nohaplotig	exon	11954155	11954373	100	-	.	Parent=FBgn0036687.1.mrna1;Target=FBgn0036687.1 1411 1629 +
Chr1	stalkie_big_nohaplotig	exon	11954568	11955125	100	-	.	Parent=FBgn0036687.1.mrna1;Target=FBgn0036687.1 853 1410 +
Chr1	stalkie_big_nohaplotig	exon	11955179	11955404	100	-	.	Parent=FBgn0036687.1.mrna1;Target=FBgn0036687.1 627 852 +
Chr1	stalkie_big_nohaplotig	exon	11955515	11955771	100	-	.	Parent=FBgn0036687.1.mrna1;Target=FBgn0036687.1 370 626 +
Chr1	stalkie_big_nohaplotig	exon	11955837	11956077	100	-	.	Parent=FBgn0036687.1.mrna1;Target=FBgn0036687.1 129 369 +
Chr1	stalkie_big_nohaplotig	exon	11956138	11956265	99	-	.	Parent=FBgn0036687.1.mrna1;Target=FBgn0036687.1 1 128 +
Chr1	stalkie_big_nohaplotig	CDS	11954155	11954373	.	-	0	Parent=FBgn0036687.1.mrna1;Target=FBgn0036687.1 1411 1629 +
Chr1	stalkie_big_nohaplotig	CDS	11954568	11955125	.	-	0	Parent=FBgn0036687.1.mrna1;Target=FBgn0036687.1 853 1410 +
Chr1	stalkie_big_nohaplotig	CDS	11955179	11955404	.	-	1	Parent=FBgn0036687.1.mrna1;Target=FBgn0036687.1 627 852 +
Chr1	stalkie_big_nohaplotig	CDS	11955515	11955771	.	-	0	Parent=FBgn0036687.1.mrna1;Target=FBgn0036687.1 370 626 +
Chr1	stalkie_big_nohaplotig	CDS	11955837	11956077	.	-	1	Parent=FBgn0036687.1.mrna1;Target=FBgn0036687.1 129 369 +
Chr1	stalkie_big_nohaplotig	CDS	11956138	11956265	.	-	0	Parent=FBgn0036687.1.mrna1;Target=FBgn0036687.1 1 128 +
Chr1	gffcl	locus	11959640	11976064	.	.	.	ID=RLOC_00005738;geneIDs=FBgn0035497.1.path1,comp160411_c0_seq1.path1;transcripts=FBgn0035497.1.mrna1,comp160411_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11959640	11976064	.	+	.	ID=FBgn0035497.1.mrna1;geneID=FBgn0035497.1.path1;Name=FBgn0035497.1;Dir=sensecoverage=100.0;identity=99.9;matches=1334;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005738
Chr1	stalkie_big_nohaplotig	exon	11959640	11959779	100	+	.	Parent=FBgn0035497.1.mrna1;Target=FBgn0035497.1 1 140 +
Chr1	stalkie_big_nohaplotig	exon	11964176	11964241	100	+	.	Parent=FBgn0035497.1.mrna1;Target=FBgn0035497.1 141 206 +
Chr1	stalkie_big_nohaplotig	exon	11970702	11970875	99	+	.	Parent=FBgn0035497.1.mrna1;Target=FBgn0035497.1 207 380 +
Chr1	stalkie_big_nohaplotig	exon	11970951	11971299	100	+	.	Parent=FBgn0035497.1.mrna1;Target=FBgn0035497.1 381 729 +
Chr1	stalkie_big_nohaplotig	exon	11973521	11973592	100	+	.	Parent=FBgn0035497.1.mrna1;Target=FBgn0035497.1 730 801 +
Chr1	stalkie_big_nohaplotig	exon	11974802	11974894	100	+	.	Parent=FBgn0035497.1.mrna1;Target=FBgn0035497.1 802 894 +
Chr1	stalkie_big_nohaplotig	exon	11975006	11975238	100	+	.	Parent=FBgn0035497.1.mrna1;Target=FBgn0035497.1 895 1127 +
Chr1	stalkie_big_nohaplotig	exon	11975789	11975885	100	+	.	Parent=FBgn0035497.1.mrna1;Target=FBgn0035497.1 1128 1224 +
Chr1	stalkie_big_nohaplotig	exon	11975954	11976064	100	+	.	Parent=FBgn0035497.1.mrna1;Target=FBgn0035497.1 1225 1335 +
Chr1	stalkie_big_nohaplotig	CDS	11959640	11959779	.	+	0	Parent=FBgn0035497.1.mrna1;Target=FBgn0035497.1 1 140 +
Chr1	stalkie_big_nohaplotig	CDS	11964176	11964241	.	+	1	Parent=FBgn0035497.1.mrna1;Target=FBgn0035497.1 141 206 +
Chr1	stalkie_big_nohaplotig	CDS	11970702	11970875	.	+	1	Parent=FBgn0035497.1.mrna1;Target=FBgn0035497.1 207 380 +
Chr1	stalkie_big_nohaplotig	CDS	11970951	11971299	.	+	1	Parent=FBgn0035497.1.mrna1;Target=FBgn0035497.1 381 729 +
Chr1	stalkie_big_nohaplotig	CDS	11973521	11973592	.	+	0	Parent=FBgn0035497.1.mrna1;Target=FBgn0035497.1 730 801 +
Chr1	stalkie_big_nohaplotig	CDS	11974802	11974894	.	+	0	Parent=FBgn0035497.1.mrna1;Target=FBgn0035497.1 802 894 +
Chr1	stalkie_big_nohaplotig	CDS	11975006	11975238	.	+	0	Parent=FBgn0035497.1.mrna1;Target=FBgn0035497.1 895 1127 +
Chr1	stalkie_big_nohaplotig	CDS	11975789	11975885	.	+	1	Parent=FBgn0035497.1.mrna1;Target=FBgn0035497.1 1128 1224 +
Chr1	stalkie_big_nohaplotig	CDS	11975954	11976064	.	+	0	Parent=FBgn0035497.1.mrna1;Target=FBgn0035497.1 1225 1335 +
Chr1	stalkie_big_nohaplotig	mRNA	11973569	11974820	.	-	.	ID=comp160411_c0_seq1.mrna1;geneID=comp160411_c0_seq1.path1;Name=comp160411_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1244;mismatches=8;indels=1;unknowns=0;Target=comp160411_c0_seq1 1253 1 .;CDS_Target=comp160411_c0_seq1 777 592 .;locus=RLOC_00005738
Chr1	stalkie_big_nohaplotig	exon	11973569	11974820	99	-	.	Parent=comp160411_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11974045	11974230	.	-	0	Parent=comp160411_c0_seq1.mrna1
Chr1	gffcl	locus	11979403	11980751	.	+	.	ID=RLOC_00005739;geneIDs=comp151389_c0_seq1.path1;transcripts=comp151389_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11979403	11980751	.	+	.	ID=comp151389_c0_seq1.mrna1;geneID=comp151389_c0_seq1.path1;Name=comp151389_c0_seq1;Dir=indeterminatecoverage=98.2;identity=99.2;matches=1342;mismatches=7;indels=4;unknowns=0;Target=comp151389_c0_seq1 1373 21 .;CDS_Target=comp151389_c0_seq1 170 21 .;locus=RLOC_00005739
Chr1	stalkie_big_nohaplotig	exon	11979403	11980751	99	+	.	Parent=comp151389_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11979403	11979552	.	+	0	Parent=comp151389_c0_seq1.mrna1
Chr1	gffcl	locus	11981212	12012854	.	.	.	ID=RLOC_00005740;geneIDs=comp150320_c0_seq1.path1,comp162847_c1_seq1.path1;transcripts=comp162847_c1_seq1.mrna1,comp150320_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11981212	12012854	.	-	.	ID=comp162847_c1_seq1.mrna1;geneID=comp162847_c1_seq1.path1;Name=comp162847_c1_seq1;Dir=indeterminatecoverage=26.3;identity=96.3;matches=516;mismatches=11;indels=9;unknowns=0;locus=RLOC_00005740
Chr1	stalkie_big_nohaplotig	exon	11981212	11981725	96	-	.	Parent=comp162847_c1_seq1.mrna1;Target=comp162847_c1_seq1 1947 1426 .
Chr1	stalkie_big_nohaplotig	exon	11997904	11997905	100	-	.	Parent=comp162847_c1_seq1.mrna1;Target=comp162847_c1_seq1 1425 1424 .
Chr1	stalkie_big_nohaplotig	exon	12010868	12010872	100	-	.	Parent=comp162847_c1_seq1.mrna1;Target=comp162847_c1_seq1 1423 1419 .
Chr1	stalkie_big_nohaplotig	exon	12012848	12012854	85	-	.	Parent=comp162847_c1_seq1.mrna1;Target=comp162847_c1_seq1 1418 1413 .
Chr1	stalkie_big_nohaplotig	CDS	11981689	11981725	.	-	0	Parent=comp162847_c1_seq1.mrna1;Target=comp162847_c1_seq1 1462 1426 .
Chr1	stalkie_big_nohaplotig	CDS	11997904	11997905	.	-	2	Parent=comp162847_c1_seq1.mrna1;Target=comp162847_c1_seq1 1425 1424 .
Chr1	stalkie_big_nohaplotig	CDS	12010868	12010872	.	-	1	Parent=comp162847_c1_seq1.mrna1;Target=comp162847_c1_seq1 1423 1419 .
Chr1	stalkie_big_nohaplotig	CDS	12012848	12012852	.	-	0	Parent=comp162847_c1_seq1.mrna1;Target=comp162847_c1_seq1 1418 1415 .
Chr1	stalkie_big_nohaplotig	mRNA	11981712	11982523	.	+	.	ID=comp150320_c0_seq1.mrna1;geneID=comp150320_c0_seq1.path1;Name=comp150320_c0_seq1;Dir=indeterminatecoverage=97.3;identity=99.3;matches=810;mismatches=2;indels=4;unknowns=0;Target=comp150320_c0_seq1 833 18 .;CDS_Target=comp150320_c0_seq1 740 573 .;locus=RLOC_00005740
Chr1	stalkie_big_nohaplotig	exon	11981712	11982523	99	+	.	Parent=comp150320_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	11982263	11982430	.	+	0	Parent=comp150320_c0_seq1.mrna1
Chr1	gffcl	locus	11983445	12001795	.	-	.	ID=RLOC_00005741;geneIDs=FBgn0004516.1.path1,comp98635_c0_seq1.path1,comp884916_c0_seq1.path1;transcripts=FBgn0004516.1.mrna1,comp98635_c0_seq1.mrna1,comp884916_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	11983445	12000658	.	-	.	ID=FBgn0004516.1.mrna1;geneID=FBgn0004516.1.path1;Name=FBgn0004516.1;Dir=sensecoverage=96.5;identity=99.7;matches=1534;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005741
Chr1	stalkie_big_nohaplotig	exon	11983445	11983615	100	-	.	Parent=FBgn0004516.1.mrna1;Target=FBgn0004516.1 1423 1593 +
Chr1	stalkie_big_nohaplotig	exon	11983709	11984053	99	-	.	Parent=FBgn0004516.1.mrna1;Target=FBgn0004516.1 1078 1422 +
Chr1	stalkie_big_nohaplotig	exon	11986214	11986292	100	-	.	Parent=FBgn0004516.1.mrna1;Target=FBgn0004516.1 999 1077 +
Chr1	stalkie_big_nohaplotig	exon	11991307	11991374	100	-	.	Parent=FBgn0004516.1.mrna1;Target=FBgn0004516.1 931 998 +
Chr1	stalkie_big_nohaplotig	exon	11991444	11992012	100	-	.	Parent=FBgn0004516.1.mrna1;Target=FBgn0004516.1 362 930 +
Chr1	stalkie_big_nohaplotig	exon	11997579	11997815	99	-	.	Parent=FBgn0004516.1.mrna1;Target=FBgn0004516.1 125 361 +
Chr1	stalkie_big_nohaplotig	exon	12000590	12000658	98	-	.	Parent=FBgn0004516.1.mrna1;Target=FBgn0004516.1 56 124 +
Chr1	stalkie_big_nohaplotig	CDS	11983445	11983615	.	-	0	Parent=FBgn0004516.1.mrna1;Target=FBgn0004516.1 1423 1593 +
Chr1	stalkie_big_nohaplotig	CDS	11983709	11984053	.	-	0	Parent=FBgn0004516.1.mrna1;Target=FBgn0004516.1 1078 1422 +
Chr1	stalkie_big_nohaplotig	CDS	11986214	11986292	.	-	1	Parent=FBgn0004516.1.mrna1;Target=FBgn0004516.1 999 1077 +
Chr1	stalkie_big_nohaplotig	CDS	11991307	11991374	.	-	0	Parent=FBgn0004516.1.mrna1;Target=FBgn0004516.1 931 998 +
Chr1	stalkie_big_nohaplotig	CDS	11991444	11992012	.	-	2	Parent=FBgn0004516.1.mrna1;Target=FBgn0004516.1 362 930 +
Chr1	stalkie_big_nohaplotig	CDS	11997579	11997815	.	-	2	Parent=FBgn0004516.1.mrna1;Target=FBgn0004516.1 125 361 +
Chr1	stalkie_big_nohaplotig	CDS	12000590	12000656	.	-	0	Parent=FBgn0004516.1.mrna1;Target=FBgn0004516.1 58 124 +
Chr1	stalkie_big_nohaplotig	mRNA	12000635	12001795	.	-	.	ID=comp98635_c0_seq1.mrna1;geneID=comp98635_c0_seq1.path1;Name=comp98635_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=241;mismatches=0;indels=0;unknowns=0;Target=comp98635_c0_seq1 2 52 +;locus=RLOC_00005741
Chr1	stalkie_big_nohaplotig	exon	12000635	12000658	100	-	.	Parent=comp98635_c0_seq1.mrna1;Target=comp98635_c0_seq1 218 241 +
Chr1	stalkie_big_nohaplotig	exon	12001579	12001795	100	-	.	Parent=comp98635_c0_seq1.mrna1;Target=comp98635_c0_seq1 1 217 +
Chr1	stalkie_big_nohaplotig	CDS	12001744	12001794	.	-	0	Parent=comp98635_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12000638	12001549	.	-	.	ID=comp884916_c0_seq1.mrna1;geneID=comp884916_c0_seq1.path1;Name=comp884916_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=241;mismatches=0;indels=0;unknowns=0;Target=comp884916_c0_seq1 192 239 .;locus=RLOC_00005741
Chr1	stalkie_big_nohaplotig	exon	12000638	12000658	100	-	.	Parent=comp884916_c0_seq1.mrna1;Target=comp884916_c0_seq1 1 21 -
Chr1	stalkie_big_nohaplotig	exon	12001330	12001549	100	-	.	Parent=comp884916_c0_seq1.mrna1;Target=comp884916_c0_seq1 22 241 -
Chr1	stalkie_big_nohaplotig	CDS	12001500	12001547	.	-	0	Parent=comp884916_c0_seq1.mrna1
Chr1	gffcl	locus	12007916	12015993	.	+	.	ID=RLOC_00005742;geneIDs=Dv_FBgn0198998.1.path1;transcripts=Dv_FBgn0198998.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12007916	12015993	.	+	.	ID=Dv_FBgn0198998.1.mrna1;geneID=Dv_FBgn0198998.1.path1;Name=Dv_FBgn0198998.1;Dir=sensecoverage=100.0;identity=100.0;matches=720;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005742
Chr1	stalkie_big_nohaplotig	exon	12007916	12007937	100	+	.	Parent=Dv_FBgn0198998.1.mrna1;Target=Dv_FBgn0198998.1 1 22 +
Chr1	stalkie_big_nohaplotig	exon	12011696	12011933	100	+	.	Parent=Dv_FBgn0198998.1.mrna1;Target=Dv_FBgn0198998.1 23 260 +
Chr1	stalkie_big_nohaplotig	exon	12012404	12012540	100	+	.	Parent=Dv_FBgn0198998.1.mrna1;Target=Dv_FBgn0198998.1 261 397 +
Chr1	stalkie_big_nohaplotig	exon	12015671	12015993	100	+	.	Parent=Dv_FBgn0198998.1.mrna1;Target=Dv_FBgn0198998.1 398 720 +
Chr1	stalkie_big_nohaplotig	CDS	12007916	12007937	.	+	0	Parent=Dv_FBgn0198998.1.mrna1;Target=Dv_FBgn0198998.1 1 22 +
Chr1	stalkie_big_nohaplotig	CDS	12011696	12011933	.	+	2	Parent=Dv_FBgn0198998.1.mrna1;Target=Dv_FBgn0198998.1 23 260 +
Chr1	stalkie_big_nohaplotig	CDS	12012404	12012540	.	+	1	Parent=Dv_FBgn0198998.1.mrna1;Target=Dv_FBgn0198998.1 261 397 +
Chr1	stalkie_big_nohaplotig	CDS	12015671	12015993	.	+	2	Parent=Dv_FBgn0198998.1.mrna1;Target=Dv_FBgn0198998.1 398 720 +
Chr1	gffcl	locus	12023823	12025793	.	+	.	ID=RLOC_00005743;geneIDs=FBgn0016013.1.path1;transcripts=FBgn0016013.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12023823	12025793	.	+	.	ID=FBgn0016013.1.mrna1;geneID=FBgn0016013.1.path1;Name=FBgn0016013.1;Dir=sensecoverage=100.0;identity=99.9;matches=1381;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005743
Chr1	stalkie_big_nohaplotig	exon	12023823	12024038	100	+	.	Parent=FBgn0016013.1.mrna1;Target=FBgn0016013.1 1 216 +
Chr1	stalkie_big_nohaplotig	exon	12024381	12024464	100	+	.	Parent=FBgn0016013.1.mrna1;Target=FBgn0016013.1 217 300 +
Chr1	stalkie_big_nohaplotig	exon	12024530	12024663	99	+	.	Parent=FBgn0016013.1.mrna1;Target=FBgn0016013.1 301 434 +
Chr1	stalkie_big_nohaplotig	exon	12024721	12025322	99	+	.	Parent=FBgn0016013.1.mrna1;Target=FBgn0016013.1 435 1036 +
Chr1	stalkie_big_nohaplotig	exon	12025377	12025505	100	+	.	Parent=FBgn0016013.1.mrna1;Target=FBgn0016013.1 1037 1165 +
Chr1	stalkie_big_nohaplotig	exon	12025576	12025793	100	+	.	Parent=FBgn0016013.1.mrna1;Target=FBgn0016013.1 1166 1383 +
Chr1	stalkie_big_nohaplotig	CDS	12023823	12024038	.	+	0	Parent=FBgn0016013.1.mrna1;Target=FBgn0016013.1 1 216 +
Chr1	stalkie_big_nohaplotig	CDS	12024381	12024464	.	+	0	Parent=FBgn0016013.1.mrna1;Target=FBgn0016013.1 217 300 +
Chr1	stalkie_big_nohaplotig	CDS	12024530	12024663	.	+	0	Parent=FBgn0016013.1.mrna1;Target=FBgn0016013.1 301 434 +
Chr1	stalkie_big_nohaplotig	CDS	12024721	12025322	.	+	1	Parent=FBgn0016013.1.mrna1;Target=FBgn0016013.1 435 1036 +
Chr1	stalkie_big_nohaplotig	CDS	12025377	12025505	.	+	2	Parent=FBgn0016013.1.mrna1;Target=FBgn0016013.1 1037 1165 +
Chr1	stalkie_big_nohaplotig	CDS	12025576	12025793	.	+	2	Parent=FBgn0016013.1.mrna1;Target=FBgn0016013.1 1166 1383 +
Chr1	gffcl	locus	12030935	12036591	.	+	.	ID=RLOC_00005744;geneIDs=FBgn0024179.1.path1;transcripts=FBgn0024179.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12030935	12036591	.	+	.	ID=FBgn0024179.1.mrna1;geneID=FBgn0024179.1.path1;Name=FBgn0024179.1;Dir=sensecoverage=100.0;identity=99.8;matches=2864;mismatches=7;indels=0;unknowns=0;locus=RLOC_00005744
Chr1	stalkie_big_nohaplotig	exon	12030935	12031007	98	+	.	Parent=FBgn0024179.1.mrna1;Target=FBgn0024179.1 1 73 +
Chr1	stalkie_big_nohaplotig	exon	12031074	12031268	98	+	.	Parent=FBgn0024179.1.mrna1;Target=FBgn0024179.1 74 268 +
Chr1	stalkie_big_nohaplotig	exon	12033860	12034017	100	+	.	Parent=FBgn0024179.1.mrna1;Target=FBgn0024179.1 269 426 +
Chr1	stalkie_big_nohaplotig	exon	12034083	12034491	99	+	.	Parent=FBgn0024179.1.mrna1;Target=FBgn0024179.1 427 835 +
Chr1	stalkie_big_nohaplotig	exon	12034556	12036591	99	+	.	Parent=FBgn0024179.1.mrna1;Target=FBgn0024179.1 836 2871 +
Chr1	stalkie_big_nohaplotig	CDS	12030935	12031007	.	+	0	Parent=FBgn0024179.1.mrna1;Target=FBgn0024179.1 1 73 +
Chr1	stalkie_big_nohaplotig	CDS	12031074	12031268	.	+	2	Parent=FBgn0024179.1.mrna1;Target=FBgn0024179.1 74 268 +
Chr1	stalkie_big_nohaplotig	CDS	12033860	12034017	.	+	2	Parent=FBgn0024179.1.mrna1;Target=FBgn0024179.1 269 426 +
Chr1	stalkie_big_nohaplotig	CDS	12034083	12034491	.	+	0	Parent=FBgn0024179.1.mrna1;Target=FBgn0024179.1 427 835 +
Chr1	stalkie_big_nohaplotig	CDS	12034556	12036591	.	+	2	Parent=FBgn0024179.1.mrna1;Target=FBgn0024179.1 836 2871 +
Chr1	gffcl	locus	12039728	12041800	.	-	.	ID=RLOC_00005745;geneIDs=FBgn0000449.1.path1;transcripts=FBgn0000449.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12039728	12041800	.	-	.	ID=FBgn0000449.1.mrna1;geneID=FBgn0000449.1.path1;Name=FBgn0000449.1;Dir=sensecoverage=100.0;identity=98.9;matches=1579;mismatches=17;indels=0;unknowns=0;locus=RLOC_00005745
Chr1	stalkie_big_nohaplotig	exon	12039728	12039841	99	-	.	Parent=FBgn0000449.1.mrna1;Target=FBgn0000449.1 1483 1596 +
Chr1	stalkie_big_nohaplotig	exon	12039921	12039982	98	-	.	Parent=FBgn0000449.1.mrna1;Target=FBgn0000449.1 1421 1482 +
Chr1	stalkie_big_nohaplotig	exon	12040060	12040192	99	-	.	Parent=FBgn0000449.1.mrna1;Target=FBgn0000449.1 1288 1420 +
Chr1	stalkie_big_nohaplotig	exon	12040276	12040328	98	-	.	Parent=FBgn0000449.1.mrna1;Target=FBgn0000449.1 1235 1287 +
Chr1	stalkie_big_nohaplotig	exon	12040393	12040956	98	-	.	Parent=FBgn0000449.1.mrna1;Target=FBgn0000449.1 671 1234 +
Chr1	stalkie_big_nohaplotig	exon	12041059	12041234	98	-	.	Parent=FBgn0000449.1.mrna1;Target=FBgn0000449.1 495 670 +
Chr1	stalkie_big_nohaplotig	exon	12041307	12041800	99	-	.	Parent=FBgn0000449.1.mrna1;Target=FBgn0000449.1 1 494 +
Chr1	stalkie_big_nohaplotig	CDS	12039728	12039841	.	-	0	Parent=FBgn0000449.1.mrna1;Target=FBgn0000449.1 1483 1596 +
Chr1	stalkie_big_nohaplotig	CDS	12039921	12039982	.	-	2	Parent=FBgn0000449.1.mrna1;Target=FBgn0000449.1 1421 1482 +
Chr1	stalkie_big_nohaplotig	CDS	12040060	12040192	.	-	0	Parent=FBgn0000449.1.mrna1;Target=FBgn0000449.1 1288 1420 +
Chr1	stalkie_big_nohaplotig	CDS	12040276	12040328	.	-	2	Parent=FBgn0000449.1.mrna1;Target=FBgn0000449.1 1235 1287 +
Chr1	stalkie_big_nohaplotig	CDS	12040393	12040956	.	-	2	Parent=FBgn0000449.1.mrna1;Target=FBgn0000449.1 671 1234 +
Chr1	stalkie_big_nohaplotig	CDS	12041059	12041234	.	-	1	Parent=FBgn0000449.1.mrna1;Target=FBgn0000449.1 495 670 +
Chr1	stalkie_big_nohaplotig	CDS	12041307	12041800	.	-	0	Parent=FBgn0000449.1.mrna1;Target=FBgn0000449.1 1 494 +
Chr1	gffcl	locus	12043909	12045901	.	-	.	ID=RLOC_00005746;geneIDs=FBgn0042179.1.path1;transcripts=FBgn0042179.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12043909	12045901	.	-	.	ID=FBgn0042179.1.mrna1;geneID=FBgn0042179.1.path1;Name=FBgn0042179.1;Dir=sensecoverage=100.0;identity=99.7;matches=1717;mismatches=5;indels=0;unknowns=0;locus=RLOC_00005746
Chr1	stalkie_big_nohaplotig	exon	12043909	12044355	100	-	.	Parent=FBgn0042179.1.mrna1;Target=FBgn0042179.1 1276 1722 +
Chr1	stalkie_big_nohaplotig	exon	12044424	12044536	100	-	.	Parent=FBgn0042179.1.mrna1;Target=FBgn0042179.1 1163 1275 +
Chr1	stalkie_big_nohaplotig	exon	12044588	12045042	100	-	.	Parent=FBgn0042179.1.mrna1;Target=FBgn0042179.1 708 1162 +
Chr1	stalkie_big_nohaplotig	exon	12045109	12045642	99	-	.	Parent=FBgn0042179.1.mrna1;Target=FBgn0042179.1 174 707 +
Chr1	stalkie_big_nohaplotig	exon	12045729	12045901	98	-	.	Parent=FBgn0042179.1.mrna1;Target=FBgn0042179.1 1 173 +
Chr1	stalkie_big_nohaplotig	CDS	12043909	12044355	.	-	0	Parent=FBgn0042179.1.mrna1;Target=FBgn0042179.1 1276 1722 +
Chr1	stalkie_big_nohaplotig	CDS	12044424	12044536	.	-	2	Parent=FBgn0042179.1.mrna1;Target=FBgn0042179.1 1163 1275 +
Chr1	stalkie_big_nohaplotig	CDS	12044588	12045042	.	-	1	Parent=FBgn0042179.1.mrna1;Target=FBgn0042179.1 708 1162 +
Chr1	stalkie_big_nohaplotig	CDS	12045109	12045642	.	-	1	Parent=FBgn0042179.1.mrna1;Target=FBgn0042179.1 174 707 +
Chr1	stalkie_big_nohaplotig	CDS	12045729	12045901	.	-	0	Parent=FBgn0042179.1.mrna1;Target=FBgn0042179.1 1 173 +
Chr1	gffcl	locus	12048488	12049993	.	-	.	ID=RLOC_00005747;geneIDs=FBgn0035490.1.path1;transcripts=FBgn0035490.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12048488	12049993	.	-	.	ID=FBgn0035490.1.mrna1;geneID=FBgn0035490.1.path1;Name=FBgn0035490.1;Dir=sensecoverage=92.9;identity=100.0;matches=1374;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005747
Chr1	stalkie_big_nohaplotig	exon	12048488	12049582	100	-	.	Parent=FBgn0035490.1.mrna1;Target=FBgn0035490.1 385 1479 +
Chr1	stalkie_big_nohaplotig	exon	12049646	12049767	100	-	.	Parent=FBgn0035490.1.mrna1;Target=FBgn0035490.1 263 384 +
Chr1	stalkie_big_nohaplotig	exon	12049837	12049993	100	-	.	Parent=FBgn0035490.1.mrna1;Target=FBgn0035490.1 106 262 +
Chr1	stalkie_big_nohaplotig	CDS	12048488	12049582	.	-	0	Parent=FBgn0035490.1.mrna1;Target=FBgn0035490.1 385 1479 +
Chr1	stalkie_big_nohaplotig	CDS	12049646	12049767	.	-	2	Parent=FBgn0035490.1.mrna1;Target=FBgn0035490.1 263 384 +
Chr1	stalkie_big_nohaplotig	CDS	12049837	12049993	.	-	0	Parent=FBgn0035490.1.mrna1;Target=FBgn0035490.1 106 262 +
Chr1	gffcl	locus	12084466	12085125	.	+	.	ID=RLOC_00005748;geneIDs=comp145666_c0_seq1.path1;transcripts=comp145666_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12084466	12085125	.	+	.	ID=comp145666_c0_seq1.mrna1;geneID=comp145666_c0_seq1.path1;Name=comp145666_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=658;mismatches=2;indels=0;unknowns=0;Target=comp145666_c0_seq1 660 1 .;CDS_Target=comp145666_c0_seq1 600 328 .;locus=RLOC_00005748
Chr1	stalkie_big_nohaplotig	exon	12084466	12085125	99	+	.	Parent=comp145666_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12084793	12085065	.	+	0	Parent=comp145666_c0_seq1.mrna1
Chr1	gffcl	locus	12090627	12885984	.	-	.	ID=RLOC_00005749;geneIDs=comp152557_c1_seq1.path1;transcripts=comp152557_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12090627	12885984	.	-	.	ID=comp152557_c1_seq1.mrna1;geneID=comp152557_c1_seq1.path1;Name=comp152557_c1_seq1;Dir=indeterminatecoverage=65.7;identity=97.2;matches=483;mismatches=0;indels=14;unknowns=0;Target=comp152557_c1_seq1 253 230 .;locus=RLOC_00005749
Chr1	stalkie_big_nohaplotig	exon	12090627	12090637	100	-	.	Parent=comp152557_c1_seq1.mrna1;Target=comp152557_c1_seq1 556 546 .
Chr1	stalkie_big_nohaplotig	exon	12090641	12090649	100	-	.	Parent=comp152557_c1_seq1.mrna1;Target=comp152557_c1_seq1 544 536 .
Chr1	stalkie_big_nohaplotig	exon	12098022	12098027	100	-	.	Parent=comp152557_c1_seq1.mrna1;Target=comp152557_c1_seq1 535 530 .
Chr1	stalkie_big_nohaplotig	exon	12105905	12105913	100	-	.	Parent=comp152557_c1_seq1.mrna1;Target=comp152557_c1_seq1 508 500 .
Chr1	stalkie_big_nohaplotig	exon	12107351	12107363	100	-	.	Parent=comp152557_c1_seq1.mrna1;Target=comp152557_c1_seq1 499 487 .
Chr1	stalkie_big_nohaplotig	exon	12113273	12113274	100	-	.	Parent=comp152557_c1_seq1.mrna1;Target=comp152557_c1_seq1 486 485 .
Chr1	stalkie_big_nohaplotig	exon	12114618	12114621	100	-	.	Parent=comp152557_c1_seq1.mrna1;Target=comp152557_c1_seq1 484 481 .
Chr1	stalkie_big_nohaplotig	exon	12116232	12116235	100	-	.	Parent=comp152557_c1_seq1.mrna1;Target=comp152557_c1_seq1 480 477 .
Chr1	stalkie_big_nohaplotig	exon	12885553	12885984	96	-	.	Parent=comp152557_c1_seq1.mrna1;Target=comp152557_c1_seq1 476 45 .
Chr1	stalkie_big_nohaplotig	CDS	12885776	12885792	.	-	0	Parent=comp152557_c1_seq1.mrna1
Chr1	gffcl	locus	12112050	12112786	.	+	.	ID=RLOC_00005752;geneIDs=FBgn0035902.1.path1;transcripts=FBgn0035902.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12112050	12112786	.	+	.	ID=FBgn0035902.1.mrna1;geneID=FBgn0035902.1.path1;Name=FBgn0035902.1;Dir=sensecoverage=100.0;identity=99.9;matches=680;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005752
Chr1	stalkie_big_nohaplotig	exon	12112050	12112408	99	+	.	Parent=FBgn0035902.1.mrna1;Target=FBgn0035902.1 1 359 +
Chr1	stalkie_big_nohaplotig	exon	12112465	12112786	100	+	.	Parent=FBgn0035902.1.mrna1;Target=FBgn0035902.1 360 681 +
Chr1	stalkie_big_nohaplotig	CDS	12112050	12112408	.	+	0	Parent=FBgn0035902.1.mrna1;Target=FBgn0035902.1 1 359 +
Chr1	stalkie_big_nohaplotig	CDS	12112465	12112786	.	+	1	Parent=FBgn0035902.1.mrna1;Target=FBgn0035902.1 360 681 +
Chr1	gffcl	locus	12118503	12120896	.	-	.	ID=RLOC_00005753;geneIDs=FBgn0035901.1.path1;transcripts=FBgn0035901.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12118503	12120896	.	-	.	ID=FBgn0035901.1.mrna1;geneID=FBgn0035901.1.path1;Name=FBgn0035901.1;Dir=sensecoverage=100.0;identity=99.5;matches=2024;mismatches=10;indels=0;unknowns=0;locus=RLOC_00005753
Chr1	stalkie_big_nohaplotig	exon	12118503	12119303	99	-	.	Parent=FBgn0035901.1.mrna1;Target=FBgn0035901.1 1234 2034 +
Chr1	stalkie_big_nohaplotig	exon	12119370	12119558	98	-	.	Parent=FBgn0035901.1.mrna1;Target=FBgn0035901.1 1045 1233 +
Chr1	stalkie_big_nohaplotig	exon	12119628	12119802	98	-	.	Parent=FBgn0035901.1.mrna1;Target=FBgn0035901.1 870 1044 +
Chr1	stalkie_big_nohaplotig	exon	12119861	12120049	100	-	.	Parent=FBgn0035901.1.mrna1;Target=FBgn0035901.1 681 869 +
Chr1	stalkie_big_nohaplotig	exon	12120106	12120211	100	-	.	Parent=FBgn0035901.1.mrna1;Target=FBgn0035901.1 575 680 +
Chr1	stalkie_big_nohaplotig	exon	12120270	12120545	99	-	.	Parent=FBgn0035901.1.mrna1;Target=FBgn0035901.1 299 574 +
Chr1	stalkie_big_nohaplotig	exon	12120599	12120896	99	-	.	Parent=FBgn0035901.1.mrna1;Target=FBgn0035901.1 1 298 +
Chr1	stalkie_big_nohaplotig	CDS	12118503	12119303	.	-	0	Parent=FBgn0035901.1.mrna1;Target=FBgn0035901.1 1234 2034 +
Chr1	stalkie_big_nohaplotig	CDS	12119370	12119558	.	-	0	Parent=FBgn0035901.1.mrna1;Target=FBgn0035901.1 1045 1233 +
Chr1	stalkie_big_nohaplotig	CDS	12119628	12119802	.	-	1	Parent=FBgn0035901.1.mrna1;Target=FBgn0035901.1 870 1044 +
Chr1	stalkie_big_nohaplotig	CDS	12119861	12120049	.	-	1	Parent=FBgn0035901.1.mrna1;Target=FBgn0035901.1 681 869 +
Chr1	stalkie_big_nohaplotig	CDS	12120106	12120211	.	-	2	Parent=FBgn0035901.1.mrna1;Target=FBgn0035901.1 575 680 +
Chr1	stalkie_big_nohaplotig	CDS	12120270	12120545	.	-	2	Parent=FBgn0035901.1.mrna1;Target=FBgn0035901.1 299 574 +
Chr1	stalkie_big_nohaplotig	CDS	12120599	12120896	.	-	0	Parent=FBgn0035901.1.mrna1;Target=FBgn0035901.1 1 298 +
Chr1	gffcl	locus	12122033	12123365	.	+	.	ID=RLOC_00005754;geneIDs=FBgn0017430.1.path1;transcripts=FBgn0017430.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12122033	12123365	.	+	.	ID=FBgn0017430.1.mrna1;geneID=FBgn0017430.1.path1;Name=FBgn0017430.1;Dir=sensecoverage=100.0;identity=99.2;matches=893;mismatches=7;indels=0;unknowns=0;locus=RLOC_00005754
Chr1	stalkie_big_nohaplotig	exon	12122033	12122161	98	+	.	Parent=FBgn0017430.1.mrna1;Target=FBgn0017430.1 1 129 +
Chr1	stalkie_big_nohaplotig	exon	12122254	12122368	99	+	.	Parent=FBgn0017430.1.mrna1;Target=FBgn0017430.1 130 244 +
Chr1	stalkie_big_nohaplotig	exon	12122497	12122896	99	+	.	Parent=FBgn0017430.1.mrna1;Target=FBgn0017430.1 245 644 +
Chr1	stalkie_big_nohaplotig	exon	12122978	12123144	98	+	.	Parent=FBgn0017430.1.mrna1;Target=FBgn0017430.1 645 811 +
Chr1	stalkie_big_nohaplotig	exon	12123277	12123365	98	+	.	Parent=FBgn0017430.1.mrna1;Target=FBgn0017430.1 812 900 +
Chr1	stalkie_big_nohaplotig	CDS	12122033	12122161	.	+	0	Parent=FBgn0017430.1.mrna1;Target=FBgn0017430.1 1 129 +
Chr1	stalkie_big_nohaplotig	CDS	12122254	12122368	.	+	0	Parent=FBgn0017430.1.mrna1;Target=FBgn0017430.1 130 244 +
Chr1	stalkie_big_nohaplotig	CDS	12122497	12122896	.	+	2	Parent=FBgn0017430.1.mrna1;Target=FBgn0017430.1 245 644 +
Chr1	stalkie_big_nohaplotig	CDS	12122978	12123144	.	+	1	Parent=FBgn0017430.1.mrna1;Target=FBgn0017430.1 645 811 +
Chr1	stalkie_big_nohaplotig	CDS	12123277	12123365	.	+	2	Parent=FBgn0017430.1.mrna1;Target=FBgn0017430.1 812 900 +
Chr1	gffcl	locus	12124413	12139250	.	-	.	ID=RLOC_00005755;geneIDs=FBgn0262508.1.path1,comp163042_c0_seq1.path1;transcripts=FBgn0262508.1.mrna1,comp163042_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12124413	12133408	.	-	.	ID=FBgn0262508.1.mrna1;geneID=FBgn0262508.1.path1;Name=FBgn0262508.1;Dir=sensecoverage=100.0;identity=99.7;matches=7436;mismatches=22;indels=0;unknowns=0;locus=RLOC_00005755
Chr1	stalkie_big_nohaplotig	exon	12124413	12126747	99	-	.	Parent=FBgn0262508.1.mrna1;Target=FBgn0262508.1 5124 7458 +
Chr1	stalkie_big_nohaplotig	exon	12127307	12127522	100	-	.	Parent=FBgn0262508.1.mrna1;Target=FBgn0262508.1 4908 5123 +
Chr1	stalkie_big_nohaplotig	exon	12127596	12127837	100	-	.	Parent=FBgn0262508.1.mrna1;Target=FBgn0262508.1 4666 4907 +
Chr1	stalkie_big_nohaplotig	exon	12127901	12129935	99	-	.	Parent=FBgn0262508.1.mrna1;Target=FBgn0262508.1 2631 4665 +
Chr1	stalkie_big_nohaplotig	exon	12130779	12133408	99	-	.	Parent=FBgn0262508.1.mrna1;Target=FBgn0262508.1 1 2630 +
Chr1	stalkie_big_nohaplotig	CDS	12124413	12126747	.	-	1	Parent=FBgn0262508.1.mrna1;Target=FBgn0262508.1 5124 7458 +
Chr1	stalkie_big_nohaplotig	CDS	12127307	12127522	.	-	1	Parent=FBgn0262508.1.mrna1;Target=FBgn0262508.1 4908 5123 +
Chr1	stalkie_big_nohaplotig	CDS	12127596	12127837	.	-	0	Parent=FBgn0262508.1.mrna1;Target=FBgn0262508.1 4666 4907 +
Chr1	stalkie_big_nohaplotig	CDS	12127901	12129935	.	-	1	Parent=FBgn0262508.1.mrna1;Target=FBgn0262508.1 2631 4665 +
Chr1	stalkie_big_nohaplotig	CDS	12130779	12133408	.	-	0	Parent=FBgn0262508.1.mrna1;Target=FBgn0262508.1 1 2630 +
Chr1	stalkie_big_nohaplotig	mRNA	12129912	12139250	.	-	.	ID=comp163042_c0_seq1.mrna1;geneID=comp163042_c0_seq1.path1;Name=comp163042_c0_seq1;Dir=antisensecoverage=100.0;identity=98.5;matches=3175;mismatches=15;indels=34;unknowns=0;Target=comp163042_c0_seq1 3109 3222 .;locus=RLOC_00005755
Chr1	stalkie_big_nohaplotig	exon	12129912	12129935	100	-	.	Parent=comp163042_c0_seq1.mrna1;Target=comp163042_c0_seq1 1 24 -
Chr1	stalkie_big_nohaplotig	exon	12135991	12137510	99	-	.	Parent=comp163042_c0_seq1.mrna1;Target=comp163042_c0_seq1 25 1547 -
Chr1	stalkie_big_nohaplotig	exon	12137605	12139250	97	-	.	Parent=comp163042_c0_seq1.mrna1;Target=comp163042_c0_seq1 1548 3224 -
Chr1	stalkie_big_nohaplotig	CDS	12139136	12139248	.	-	0	Parent=comp163042_c0_seq1.mrna1
Chr1	gffcl	locus	12134677	12145402	.	+	.	ID=RLOC_00005756;geneIDs=comp156088_c0_seq1.path1;transcripts=comp156088_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12134677	12145402	.	+	.	ID=comp156088_c0_seq1.mrna1;geneID=comp156088_c0_seq1.path1;Name=comp156088_c0_seq1;Dir=sensecoverage=100.0;identity=95.3;matches=674;mismatches=25;indels=8;unknowns=0;Target=comp156088_c0_seq1 118 231 +;locus=RLOC_00005756
Chr1	stalkie_big_nohaplotig	exon	12134677	12134930	100	+	.	Parent=comp156088_c0_seq1.mrna1;Target=comp156088_c0_seq1 1 254 +
Chr1	stalkie_big_nohaplotig	exon	12140006	12140150	89	+	.	Parent=comp156088_c0_seq1.mrna1;Target=comp156088_c0_seq1 255 394 +
Chr1	stalkie_big_nohaplotig	exon	12140185	12140371	94	+	.	Parent=comp156088_c0_seq1.mrna1;Target=comp156088_c0_seq1 408 597 +
Chr1	stalkie_big_nohaplotig	exon	12145285	12145402	93	+	.	Parent=comp156088_c0_seq1.mrna1;Target=comp156088_c0_seq1 598 715 +
Chr1	stalkie_big_nohaplotig	CDS	12134794	12134907	.	+	0	Parent=comp156088_c0_seq1.mrna1
Chr1	gffcl	locus	12135561	12135888	.	+	.	ID=RLOC_00005757;geneIDs=comp116201_c0_seq1.path1;transcripts=comp116201_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12135561	12135888	.	+	.	ID=comp116201_c0_seq1.mrna1;geneID=comp116201_c0_seq1.path1;Name=comp116201_c0_seq1;Dir=indeterminatecoverage=90.9;identity=99.7;matches=328;mismatches=0;indels=1;unknowns=0;Target=comp116201_c0_seq1 329 1 .;CDS_Target=comp116201_c0_seq1 329 219 .;locus=RLOC_00005757
Chr1	stalkie_big_nohaplotig	exon	12135561	12135888	99	+	.	Parent=comp116201_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12135779	12135888	.	+	0	Parent=comp116201_c0_seq1.mrna1
Chr1	gffcl	locus	12175747	12176929	.	+	.	ID=RLOC_00005758;geneIDs=FBgn0035911.1.path1;transcripts=FBgn0035911.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12175747	12176929	.	+	.	ID=FBgn0035911.1.mrna1;geneID=FBgn0035911.1.path1;Name=FBgn0035911.1;Dir=sensecoverage=98.8;identity=99.0;matches=1044;mismatches=11;indels=0;unknowns=0;locus=RLOC_00005758
Chr1	stalkie_big_nohaplotig	exon	12175747	12176090	97	+	.	Parent=FBgn0035911.1.mrna1;Target=FBgn0035911.1 1 344 +
Chr1	stalkie_big_nohaplotig	exon	12176152	12176277	100	+	.	Parent=FBgn0035911.1.mrna1;Target=FBgn0035911.1 345 470 +
Chr1	stalkie_big_nohaplotig	exon	12176345	12176929	99	+	.	Parent=FBgn0035911.1.mrna1;Target=FBgn0035911.1 471 1055 +
Chr1	stalkie_big_nohaplotig	CDS	12175867	12176090	.	+	0	Parent=FBgn0035911.1.mrna1;Target=FBgn0035911.1 121 344 +
Chr1	stalkie_big_nohaplotig	CDS	12176152	12176277	.	+	1	Parent=FBgn0035911.1.mrna1;Target=FBgn0035911.1 345 470 +
Chr1	stalkie_big_nohaplotig	CDS	12176345	12176927	.	+	1	Parent=FBgn0035911.1.mrna1;Target=FBgn0035911.1 471 1053 +
Chr1	gffcl	locus	12180338	12195025	.	-	.	ID=RLOC_00005759;geneIDs=FBgn0260442.1.path1;transcripts=FBgn0260442.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12180338	12195025	.	-	.	ID=FBgn0260442.1.mrna1;geneID=FBgn0260442.1.path1;Name=FBgn0260442.1;Dir=sensecoverage=100.0;identity=99.5;matches=8495;mismatches=31;indels=12;unknowns=0;locus=RLOC_00005759
Chr1	stalkie_big_nohaplotig	exon	12180338	12180566	100	-	.	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 8304 8532 +
Chr1	stalkie_big_nohaplotig	exon	12180640	12181220	99	-	.	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 7723 8303 +
Chr1	stalkie_big_nohaplotig	exon	12181809	12182489	100	-	.	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 7042 7722 +
Chr1	stalkie_big_nohaplotig	exon	12183067	12183582	100	-	.	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 6526 7041 +
Chr1	stalkie_big_nohaplotig	exon	12183643	12183759	100	-	.	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 6409 6525 +
Chr1	stalkie_big_nohaplotig	exon	12187502	12187692	100	-	.	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 6218 6408 +
Chr1	stalkie_big_nohaplotig	exon	12187758	12192345	99	-	.	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 1630 6217 +
Chr1	stalkie_big_nohaplotig	exon	12192415	12192531	100	-	.	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 1513 1629 +
Chr1	stalkie_big_nohaplotig	exon	12192931	12193019	100	-	.	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 1424 1512 +
Chr1	stalkie_big_nohaplotig	exon	12193165	12193253	98	-	.	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 1335 1423 +
Chr1	stalkie_big_nohaplotig	exon	12193322	12193825	99	-	.	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 831 1334 +
Chr1	stalkie_big_nohaplotig	exon	12193890	12193968	100	-	.	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 752 830 +
Chr1	stalkie_big_nohaplotig	exon	12194119	12194310	98	-	.	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 560 751 +
Chr1	stalkie_big_nohaplotig	exon	12194394	12194792	100	-	.	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 161 559 +
Chr1	stalkie_big_nohaplotig	exon	12194866	12195025	100	-	.	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 1 160 +
Chr1	stalkie_big_nohaplotig	CDS	12180338	12180566	.	-	1	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 8304 8532 +
Chr1	stalkie_big_nohaplotig	CDS	12180640	12181220	.	-	0	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 7723 8303 +
Chr1	stalkie_big_nohaplotig	CDS	12181809	12182489	.	-	0	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 7042 7722 +
Chr1	stalkie_big_nohaplotig	CDS	12183067	12183582	.	-	0	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 6526 7041 +
Chr1	stalkie_big_nohaplotig	CDS	12183643	12183759	.	-	0	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 6409 6525 +
Chr1	stalkie_big_nohaplotig	CDS	12187502	12187692	.	-	2	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 6218 6408 +
Chr1	stalkie_big_nohaplotig	CDS	12187758	12192345	.	-	0	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 1630 6217 +
Chr1	stalkie_big_nohaplotig	CDS	12192415	12192531	.	-	0	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 1513 1629 +
Chr1	stalkie_big_nohaplotig	CDS	12192931	12193019	.	-	2	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 1424 1512 +
Chr1	stalkie_big_nohaplotig	CDS	12193165	12193253	.	-	1	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 1335 1423 +
Chr1	stalkie_big_nohaplotig	CDS	12193322	12193825	.	-	1	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 831 1334 +
Chr1	stalkie_big_nohaplotig	CDS	12193890	12193968	.	-	2	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 752 830 +
Chr1	stalkie_big_nohaplotig	CDS	12194119	12194310	.	-	2	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 560 751 +
Chr1	stalkie_big_nohaplotig	CDS	12194394	12194792	.	-	2	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 161 559 +
Chr1	stalkie_big_nohaplotig	CDS	12194866	12195025	.	-	0	Parent=FBgn0260442.1.mrna1;Target=FBgn0260442.1 1 160 +
Chr1	gffcl	locus	12185204	12185958	.	-	.	ID=RLOC_00005760;geneIDs=comp140877_c0_seq1.path1;transcripts=comp140877_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12185204	12185958	.	-	.	ID=comp140877_c0_seq1.mrna1;geneID=comp140877_c0_seq1.path1;Name=comp140877_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.6;matches=752;mismatches=3;indels=0;unknowns=0;Target=comp140877_c0_seq1 755 1 .;CDS_Target=comp140877_c0_seq1 138 1 .;locus=RLOC_00005760
Chr1	stalkie_big_nohaplotig	exon	12185204	12185958	99	-	.	Parent=comp140877_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12185821	12185958	.	-	0	Parent=comp140877_c0_seq1.mrna1
Chr1	gffcl	locus	12198632	12199866	.	+	.	ID=RLOC_00005761;geneIDs=FBgn0034479.1.path1;transcripts=FBgn0034479.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12198632	12199866	.	+	.	ID=FBgn0034479.1.mrna1;geneID=FBgn0034479.1.path1;Name=FBgn0034479.1;Dir=sensecoverage=100.0;identity=99.8;matches=961;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005761
Chr1	stalkie_big_nohaplotig	exon	12198632	12198650	100	+	.	Parent=FBgn0034479.1.mrna1;Target=FBgn0034479.1 1 19 +
Chr1	stalkie_big_nohaplotig	exon	12198723	12199062	100	+	.	Parent=FBgn0034479.1.mrna1;Target=FBgn0034479.1 20 359 +
Chr1	stalkie_big_nohaplotig	exon	12199203	12199346	99	+	.	Parent=FBgn0034479.1.mrna1;Target=FBgn0034479.1 360 503 +
Chr1	stalkie_big_nohaplotig	exon	12199407	12199866	99	+	.	Parent=FBgn0034479.1.mrna1;Target=FBgn0034479.1 504 963 +
Chr1	stalkie_big_nohaplotig	CDS	12198632	12198650	.	+	0	Parent=FBgn0034479.1.mrna1;Target=FBgn0034479.1 1 19 +
Chr1	stalkie_big_nohaplotig	CDS	12198723	12199062	.	+	2	Parent=FBgn0034479.1.mrna1;Target=FBgn0034479.1 20 359 +
Chr1	stalkie_big_nohaplotig	CDS	12199203	12199346	.	+	1	Parent=FBgn0034479.1.mrna1;Target=FBgn0034479.1 360 503 +
Chr1	stalkie_big_nohaplotig	CDS	12199407	12199866	.	+	1	Parent=FBgn0034479.1.mrna1;Target=FBgn0034479.1 504 963 +
Chr1	gffcl	locus	12210380	12223987	.	-	.	ID=RLOC_00005762;geneIDs=FBgn0034962.1.path1;transcripts=FBgn0034962.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12210380	12223987	.	-	.	ID=FBgn0034962.1.mrna1;geneID=FBgn0034962.1.path1;Name=FBgn0034962.1;Dir=antisensecoverage=15.2;identity=100.0;matches=225;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005762
Chr1	stalkie_big_nohaplotig	exon	12210380	12210414	100	-	.	Parent=FBgn0034962.1.mrna1;Target=FBgn0034962.1 1 35 -
Chr1	stalkie_big_nohaplotig	exon	12223798	12223987	100	-	.	Parent=FBgn0034962.1.mrna1;Target=FBgn0034962.1 36 225 -
Chr1	gffcl	locus	12257339	12260271	.	-	.	ID=RLOC_00005764;geneIDs=FBgn0024236.1.path1;transcripts=FBgn0024236.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12257339	12260271	.	-	.	ID=FBgn0024236.1.mrna1;geneID=FBgn0024236.1.path1;Name=FBgn0024236.1;Dir=sensecoverage=100.0;identity=99.8;matches=2254;mismatches=5;indels=0;unknowns=0;locus=RLOC_00005764
Chr1	stalkie_big_nohaplotig	exon	12257339	12257497	100	-	.	Parent=FBgn0024236.1.mrna1;Target=FBgn0024236.1 2101 2259 +
Chr1	stalkie_big_nohaplotig	exon	12257846	12258114	100	-	.	Parent=FBgn0024236.1.mrna1;Target=FBgn0024236.1 1832 2100 +
Chr1	stalkie_big_nohaplotig	exon	12258254	12259046	100	-	.	Parent=FBgn0024236.1.mrna1;Target=FBgn0024236.1 1039 1831 +
Chr1	stalkie_big_nohaplotig	exon	12259101	12259270	100	-	.	Parent=FBgn0024236.1.mrna1;Target=FBgn0024236.1 869 1038 +
Chr1	stalkie_big_nohaplotig	exon	12259343	12259742	99	-	.	Parent=FBgn0024236.1.mrna1;Target=FBgn0024236.1 469 868 +
Chr1	stalkie_big_nohaplotig	exon	12259804	12260271	99	-	.	Parent=FBgn0024236.1.mrna1;Target=FBgn0024236.1 1 468 +
Chr1	stalkie_big_nohaplotig	CDS	12257339	12257497	.	-	0	Parent=FBgn0024236.1.mrna1;Target=FBgn0024236.1 2101 2259 +
Chr1	stalkie_big_nohaplotig	CDS	12257846	12258114	.	-	2	Parent=FBgn0024236.1.mrna1;Target=FBgn0024236.1 1832 2100 +
Chr1	stalkie_big_nohaplotig	CDS	12258254	12259046	.	-	0	Parent=FBgn0024236.1.mrna1;Target=FBgn0024236.1 1039 1831 +
Chr1	stalkie_big_nohaplotig	CDS	12259101	12259270	.	-	2	Parent=FBgn0024236.1.mrna1;Target=FBgn0024236.1 869 1038 +
Chr1	stalkie_big_nohaplotig	CDS	12259343	12259742	.	-	0	Parent=FBgn0024236.1.mrna1;Target=FBgn0024236.1 469 868 +
Chr1	stalkie_big_nohaplotig	CDS	12259804	12260271	.	-	0	Parent=FBgn0024236.1.mrna1;Target=FBgn0024236.1 1 468 +
Chr1	gffcl	locus	12277910	12282652	.	+	.	ID=RLOC_00005765;geneIDs=FBgn0035488.1.path1,comp160089_c0_seq1.path1;transcripts=comp160089_c0_seq1.mrna1,FBgn0035488.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12277910	12282652	.	+	.	ID=comp160089_c0_seq1.mrna1;geneID=comp160089_c0_seq1.path1;Name=comp160089_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=4134;mismatches=12;indels=6;unknowns=0;locus=RLOC_00005765
Chr1	stalkie_big_nohaplotig	exon	12277910	12278103	100	+	.	Parent=comp160089_c0_seq1.mrna1;Target=comp160089_c0_seq1 195 2 .
Chr1	stalkie_big_nohaplotig	exon	12278174	12278816	98	+	.	Parent=comp160089_c0_seq1.mrna1;Target=comp160089_c0_seq1 838 196 .
Chr1	stalkie_big_nohaplotig	exon	12278882	12279544	100	+	.	Parent=comp160089_c0_seq1.mrna1;Target=comp160089_c0_seq1 1501 839 .
Chr1	stalkie_big_nohaplotig	exon	12279886	12281697	99	+	.	Parent=comp160089_c0_seq1.mrna1;Target=comp160089_c0_seq1 3313 1502 .
Chr1	stalkie_big_nohaplotig	exon	12281752	12281862	100	+	.	Parent=comp160089_c0_seq1.mrna1;Target=comp160089_c0_seq1 3424 3314 .
Chr1	stalkie_big_nohaplotig	exon	12281924	12282652	99	+	.	Parent=comp160089_c0_seq1.mrna1;Target=comp160089_c0_seq1 4147 3425 .
Chr1	stalkie_big_nohaplotig	CDS	12280448	12281697	.	+	0	Parent=comp160089_c0_seq1.mrna1;Target=comp160089_c0_seq1 3313 2064 .
Chr1	stalkie_big_nohaplotig	CDS	12281752	12281862	.	+	1	Parent=comp160089_c0_seq1.mrna1;Target=comp160089_c0_seq1 3424 3314 .
Chr1	stalkie_big_nohaplotig	CDS	12281924	12282044	.	+	1	Parent=comp160089_c0_seq1.mrna1;Target=comp160089_c0_seq1 3545 3425 .
Chr1	stalkie_big_nohaplotig	mRNA	12280283	12282041	.	+	.	ID=FBgn0035488.1.mrna1;geneID=FBgn0035488.1.path1;Name=FBgn0035488.1;Dir=sensecoverage=100.0;identity=100.0;matches=1551;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005765
Chr1	stalkie_big_nohaplotig	exon	12280283	12280308	100	+	.	Parent=FBgn0035488.1.mrna1;Target=FBgn0035488.1 1 26 +
Chr1	stalkie_big_nohaplotig	exon	12280402	12281697	100	+	.	Parent=FBgn0035488.1.mrna1;Target=FBgn0035488.1 27 1322 +
Chr1	stalkie_big_nohaplotig	exon	12281752	12281862	100	+	.	Parent=FBgn0035488.1.mrna1;Target=FBgn0035488.1 1323 1433 +
Chr1	stalkie_big_nohaplotig	exon	12281924	12282041	100	+	.	Parent=FBgn0035488.1.mrna1;Target=FBgn0035488.1 1434 1551 +
Chr1	stalkie_big_nohaplotig	CDS	12280283	12280308	.	+	0	Parent=FBgn0035488.1.mrna1;Target=FBgn0035488.1 1 26 +
Chr1	stalkie_big_nohaplotig	CDS	12280402	12281697	.	+	1	Parent=FBgn0035488.1.mrna1;Target=FBgn0035488.1 27 1322 +
Chr1	stalkie_big_nohaplotig	CDS	12281752	12281862	.	+	1	Parent=FBgn0035488.1.mrna1;Target=FBgn0035488.1 1323 1433 +
Chr1	stalkie_big_nohaplotig	CDS	12281924	12282041	.	+	1	Parent=FBgn0035488.1.mrna1;Target=FBgn0035488.1 1434 1551 +
Chr1	gffcl	locus	12278018	12280134	.	-	.	ID=RLOC_00005766;geneIDs=FBgn0263832.1.path1;transcripts=FBgn0263832.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12278018	12280134	.	-	.	ID=FBgn0263832.1.mrna1;geneID=FBgn0263832.1.path1;Name=FBgn0263832.1;Dir=sensecoverage=100.0;identity=99.5;matches=1492;mismatches=8;indels=0;unknowns=0;locus=RLOC_00005766
Chr1	stalkie_big_nohaplotig	exon	12278018	12278107	100	-	.	Parent=FBgn0263832.1.mrna1;Target=FBgn0263832.1 1411 1500 +
Chr1	stalkie_big_nohaplotig	exon	12278178	12278816	98	-	.	Parent=FBgn0263832.1.mrna1;Target=FBgn0263832.1 772 1410 +
Chr1	stalkie_big_nohaplotig	exon	12278882	12279542	100	-	.	Parent=FBgn0263832.1.mrna1;Target=FBgn0263832.1 111 771 +
Chr1	stalkie_big_nohaplotig	exon	12279884	12279921	100	-	.	Parent=FBgn0263832.1.mrna1;Target=FBgn0263832.1 73 110 +
Chr1	stalkie_big_nohaplotig	exon	12280063	12280134	98	-	.	Parent=FBgn0263832.1.mrna1;Target=FBgn0263832.1 1 72 +
Chr1	stalkie_big_nohaplotig	CDS	12278018	12278107	.	-	0	Parent=FBgn0263832.1.mrna1;Target=FBgn0263832.1 1411 1500 +
Chr1	stalkie_big_nohaplotig	CDS	12278178	12278816	.	-	0	Parent=FBgn0263832.1.mrna1;Target=FBgn0263832.1 772 1410 +
Chr1	stalkie_big_nohaplotig	CDS	12278882	12279542	.	-	1	Parent=FBgn0263832.1.mrna1;Target=FBgn0263832.1 111 771 +
Chr1	stalkie_big_nohaplotig	CDS	12279884	12279921	.	-	0	Parent=FBgn0263832.1.mrna1;Target=FBgn0263832.1 73 110 +
Chr1	stalkie_big_nohaplotig	CDS	12280063	12280134	.	-	0	Parent=FBgn0263832.1.mrna1;Target=FBgn0263832.1 1 72 +
Chr1	gffcl	locus	12282659	12283301	.	+	.	ID=RLOC_00005767;geneIDs=comp219852_c0_seq1.path1;transcripts=comp219852_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12282659	12283301	.	+	.	ID=comp219852_c0_seq1.mrna1;geneID=comp219852_c0_seq1.path1;Name=comp219852_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=640;mismatches=3;indels=0;unknowns=0;Target=comp219852_c0_seq1 643 1 .;CDS_Target=comp219852_c0_seq1 83 3 .;locus=RLOC_00005767
Chr1	stalkie_big_nohaplotig	exon	12282659	12283301	99	+	.	Parent=comp219852_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12282661	12282741	.	+	0	Parent=comp219852_c0_seq1.mrna1
Chr1	gffcl	locus	12283365	12285147	.	-	.	ID=RLOC_00005768;geneIDs=ORF1229.path1,comp158872_c0_seq1.path1;transcripts=comp158872_c0_seq1.mrna1,ORF1229.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12283365	12285147	.	-	.	ID=comp158872_c0_seq1.mrna1;geneID=comp158872_c0_seq1.path1;Name=comp158872_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=1711;mismatches=4;indels=0;unknowns=0;Target=comp158872_c0_seq1 265 798 .;locus=RLOC_00005768
Chr1	stalkie_big_nohaplotig	exon	12283365	12284459	99	-	.	Parent=comp158872_c0_seq1.mrna1;Target=comp158872_c0_seq1 1 1095 -
Chr1	stalkie_big_nohaplotig	exon	12284528	12285147	99	-	.	Parent=comp158872_c0_seq1.mrna1;Target=comp158872_c0_seq1 1096 1715 -
Chr1	stalkie_big_nohaplotig	CDS	12283629	12284162	.	-	0	Parent=comp158872_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12283632	12284962	.	-	.	ID=ORF1229.mrna1;geneID=ORF1229.path1;Name=ORF1229;Dir=sensecoverage=100.0;identity=100.0;matches=1176;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005768
Chr1	stalkie_big_nohaplotig	exon	12283632	12284372	100	-	.	Parent=ORF1229.mrna1;Target=ORF1229 436 1176 +
Chr1	stalkie_big_nohaplotig	exon	12284528	12284962	100	-	.	Parent=ORF1229.mrna1;Target=ORF1229 1 435 +
Chr1	stalkie_big_nohaplotig	CDS	12283632	12284372	.	-	0	Parent=ORF1229.mrna1;Target=ORF1229 436 1176 +
Chr1	stalkie_big_nohaplotig	CDS	12284528	12284962	.	-	0	Parent=ORF1229.mrna1;Target=ORF1229 1 435 +
Chr1	gffcl	locus	12287234	12289272	.	-	.	ID=RLOC_00005769;geneIDs=FBgn0035900.1.path1;transcripts=FBgn0035900.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12287234	12289272	.	-	.	ID=FBgn0035900.1.mrna1;geneID=FBgn0035900.1.path1;Name=FBgn0035900.1;Dir=sensecoverage=100.0;identity=99.6;matches=1856;mismatches=4;indels=3;unknowns=0;locus=RLOC_00005769
Chr1	stalkie_big_nohaplotig	exon	12287234	12287584	100	-	.	Parent=FBgn0035900.1.mrna1;Target=FBgn0035900.1 1513 1863 +
Chr1	stalkie_big_nohaplotig	exon	12287656	12287851	100	-	.	Parent=FBgn0035900.1.mrna1;Target=FBgn0035900.1 1317 1512 +
Chr1	stalkie_big_nohaplotig	exon	12287910	12288476	100	-	.	Parent=FBgn0035900.1.mrna1;Target=FBgn0035900.1 750 1316 +
Chr1	stalkie_big_nohaplotig	exon	12288527	12289272	99	-	.	Parent=FBgn0035900.1.mrna1;Target=FBgn0035900.1 1 749 +
Chr1	stalkie_big_nohaplotig	CDS	12287234	12287584	.	-	0	Parent=FBgn0035900.1.mrna1;Target=FBgn0035900.1 1513 1863 +
Chr1	stalkie_big_nohaplotig	CDS	12287656	12287851	.	-	1	Parent=FBgn0035900.1.mrna1;Target=FBgn0035900.1 1317 1512 +
Chr1	stalkie_big_nohaplotig	CDS	12287910	12288476	.	-	1	Parent=FBgn0035900.1.mrna1;Target=FBgn0035900.1 750 1316 +
Chr1	stalkie_big_nohaplotig	CDS	12288527	12289272	.	-	0	Parent=FBgn0035900.1.mrna1;Target=FBgn0035900.1 1 749 +
Chr1	gffcl	locus	12290330	12291565	.	.	.	ID=RLOC_00005770;geneIDs=FBgn0017579.1.path1,comp135377_c1_seq1.path1;transcripts=FBgn0017579.1.mrna1,comp135377_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12290330	12291565	.	+	.	ID=FBgn0017579.1.mrna1;geneID=FBgn0017579.1.path1;Name=FBgn0017579.1;Dir=sensecoverage=99.6;identity=99.8;matches=537;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005770
Chr1	stalkie_big_nohaplotig	exon	12290330	12290372	100	+	.	Parent=FBgn0017579.1.mrna1;Target=FBgn0017579.1 3 45 +
Chr1	stalkie_big_nohaplotig	exon	12290700	12290801	100	+	.	Parent=FBgn0017579.1.mrna1;Target=FBgn0017579.1 46 147 +
Chr1	stalkie_big_nohaplotig	exon	12290980	12291174	99	+	.	Parent=FBgn0017579.1.mrna1;Target=FBgn0017579.1 148 342 +
Chr1	stalkie_big_nohaplotig	exon	12291368	12291565	100	+	.	Parent=FBgn0017579.1.mrna1;Target=FBgn0017579.1 343 540 +
Chr1	stalkie_big_nohaplotig	CDS	12290331	12290372	.	+	0	Parent=FBgn0017579.1.mrna1;Target=FBgn0017579.1 4 45 +
Chr1	stalkie_big_nohaplotig	CDS	12290700	12290801	.	+	0	Parent=FBgn0017579.1.mrna1;Target=FBgn0017579.1 46 147 +
Chr1	stalkie_big_nohaplotig	CDS	12290980	12291174	.	+	0	Parent=FBgn0017579.1.mrna1;Target=FBgn0017579.1 148 342 +
Chr1	stalkie_big_nohaplotig	CDS	12291368	12291565	.	+	0	Parent=FBgn0017579.1.mrna1;Target=FBgn0017579.1 343 540 +
Chr1	stalkie_big_nohaplotig	mRNA	12290349	12290721	.	-	.	ID=comp135377_c1_seq1.mrna1;geneID=comp135377_c1_seq1.path1;Name=comp135377_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=366;mismatches=0;indels=8;unknowns=0;Target=comp135377_c1_seq1 367 1 .;CDS_Target=comp135377_c1_seq1 60 1 .;locus=RLOC_00005770
Chr1	stalkie_big_nohaplotig	exon	12290349	12290721	97	-	.	Parent=comp135377_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12290663	12290721	.	-	0	Parent=comp135377_c1_seq1.mrna1
Chr1	gffcl	locus	12293312	12294748	.	-	.	ID=RLOC_00005771;geneIDs=FBgn0017429.1.path1;transcripts=FBgn0017429.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12293312	12294748	.	-	.	ID=FBgn0017429.1.mrna1;geneID=FBgn0017429.1.path1;Name=FBgn0017429.1;Dir=sensecoverage=100.0;identity=99.8;matches=1267;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005771
Chr1	stalkie_big_nohaplotig	exon	12293312	12293680	100	-	.	Parent=FBgn0017429.1.mrna1;Target=FBgn0017429.1 901 1269 +
Chr1	stalkie_big_nohaplotig	exon	12293735	12294023	100	-	.	Parent=FBgn0017429.1.mrna1;Target=FBgn0017429.1 612 900 +
Chr1	stalkie_big_nohaplotig	exon	12294080	12294574	99	-	.	Parent=FBgn0017429.1.mrna1;Target=FBgn0017429.1 117 611 +
Chr1	stalkie_big_nohaplotig	exon	12294633	12294748	100	-	.	Parent=FBgn0017429.1.mrna1;Target=FBgn0017429.1 1 116 +
Chr1	stalkie_big_nohaplotig	CDS	12293312	12293680	.	-	0	Parent=FBgn0017429.1.mrna1;Target=FBgn0017429.1 901 1269 +
Chr1	stalkie_big_nohaplotig	CDS	12293735	12294023	.	-	1	Parent=FBgn0017429.1.mrna1;Target=FBgn0017429.1 612 900 +
Chr1	stalkie_big_nohaplotig	CDS	12294080	12294574	.	-	1	Parent=FBgn0017429.1.mrna1;Target=FBgn0017429.1 117 611 +
Chr1	stalkie_big_nohaplotig	CDS	12294633	12294748	.	-	0	Parent=FBgn0017429.1.mrna1;Target=FBgn0017429.1 1 116 +
Chr1	gffcl	locus	12308140	12325086	.	+	.	ID=RLOC_00005772;geneIDs=FBgn0035914.1.path1;transcripts=FBgn0035914.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12308140	12325086	.	+	.	ID=FBgn0035914.1.mrna1;geneID=FBgn0035914.1.path1;Name=FBgn0035914.1;Dir=sensecoverage=100.0;identity=99.3;matches=956;mismatches=7;indels=0;unknowns=0;locus=RLOC_00005772
Chr1	stalkie_big_nohaplotig	exon	12308140	12308346	100	+	.	Parent=FBgn0035914.1.mrna1;Target=FBgn0035914.1 1 207 +
Chr1	stalkie_big_nohaplotig	exon	12316094	12316255	100	+	.	Parent=FBgn0035914.1.mrna1;Target=FBgn0035914.1 208 369 +
Chr1	stalkie_big_nohaplotig	exon	12322038	12322245	99	+	.	Parent=FBgn0035914.1.mrna1;Target=FBgn0035914.1 370 577 +
Chr1	stalkie_big_nohaplotig	exon	12324641	12324836	98	+	.	Parent=FBgn0035914.1.mrna1;Target=FBgn0035914.1 578 773 +
Chr1	stalkie_big_nohaplotig	exon	12324897	12325086	98	+	.	Parent=FBgn0035914.1.mrna1;Target=FBgn0035914.1 774 963 +
Chr1	stalkie_big_nohaplotig	CDS	12308140	12308346	.	+	0	Parent=FBgn0035914.1.mrna1;Target=FBgn0035914.1 1 207 +
Chr1	stalkie_big_nohaplotig	CDS	12316094	12316255	.	+	0	Parent=FBgn0035914.1.mrna1;Target=FBgn0035914.1 208 369 +
Chr1	stalkie_big_nohaplotig	CDS	12322038	12322245	.	+	0	Parent=FBgn0035914.1.mrna1;Target=FBgn0035914.1 370 577 +
Chr1	stalkie_big_nohaplotig	CDS	12324641	12324836	.	+	2	Parent=FBgn0035914.1.mrna1;Target=FBgn0035914.1 578 773 +
Chr1	stalkie_big_nohaplotig	CDS	12324897	12325086	.	+	1	Parent=FBgn0035914.1.mrna1;Target=FBgn0035914.1 774 963 +
Chr1	gffcl	locus	12326146	12328025	.	-	.	ID=RLOC_00005773;geneIDs=comp161900_c0_seq1.path1;transcripts=comp161900_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12326146	12328025	.	-	.	ID=comp161900_c0_seq1.mrna1;geneID=comp161900_c0_seq1.path1;Name=comp161900_c0_seq1;Dir=indeterminatecoverage=99.9;identity=95.8;matches=1824;mismatches=30;indels=50;unknowns=0;Target=comp161900_c0_seq1 1880 3 .;CDS_Target=comp161900_c0_seq1 1541 1536 .;locus=RLOC_00005773
Chr1	stalkie_big_nohaplotig	exon	12326146	12328025	95	-	.	Parent=comp161900_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12326485	12326490	.	-	0	Parent=comp161900_c0_seq1.mrna1
Chr1	gffcl	locus	12328343	12328978	.	-	.	ID=RLOC_00005774;geneIDs=comp154082_c1_seq1.path1;transcripts=comp154082_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12328343	12328978	.	-	.	ID=comp154082_c1_seq1.mrna1;geneID=comp154082_c1_seq1.path1;Name=comp154082_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=633;mismatches=3;indels=0;unknowns=0;Target=comp154082_c1_seq1 636 1 .;CDS_Target=comp154082_c1_seq1 441 325 .;locus=RLOC_00005774
Chr1	stalkie_big_nohaplotig	exon	12328343	12328978	99	-	.	Parent=comp154082_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12328538	12328654	.	-	0	Parent=comp154082_c1_seq1.mrna1
Chr1	gffcl	locus	12329458	12329725	.	+	.	ID=RLOC_00005775;geneIDs=comp54827_c0_seq1.path1;transcripts=comp54827_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12329458	12329725	.	+	.	ID=comp54827_c0_seq1.mrna1;geneID=comp54827_c0_seq1.path1;Name=comp54827_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=268;mismatches=0;indels=0;unknowns=0;Target=comp54827_c0_seq1 268 1 .;CDS_Target=comp54827_c0_seq1 232 143 .;locus=RLOC_00005775
Chr1	stalkie_big_nohaplotig	exon	12329458	12329725	100	+	.	Parent=comp54827_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12329600	12329689	.	+	0	Parent=comp54827_c0_seq1.mrna1
Chr1	gffcl	locus	12331135	12333680	.	+	.	ID=RLOC_00005776;geneIDs=FBgn0052351.1.path1;transcripts=FBgn0052351.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12331135	12333680	.	+	.	ID=FBgn0052351.1.mrna1;geneID=FBgn0052351.1.path1;Name=FBgn0052351.1;Dir=sensecoverage=100.0;identity=99.8;matches=1847;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005776
Chr1	stalkie_big_nohaplotig	exon	12331135	12332373	100	+	.	Parent=FBgn0052351.1.mrna1;Target=FBgn0052351.1 1 1239 +
Chr1	stalkie_big_nohaplotig	exon	12333007	12333471	99	+	.	Parent=FBgn0052351.1.mrna1;Target=FBgn0052351.1 1240 1704 +
Chr1	stalkie_big_nohaplotig	exon	12333534	12333680	100	+	.	Parent=FBgn0052351.1.mrna1;Target=FBgn0052351.1 1705 1851 +
Chr1	stalkie_big_nohaplotig	CDS	12331135	12332373	.	+	0	Parent=FBgn0052351.1.mrna1;Target=FBgn0052351.1 1 1239 +
Chr1	stalkie_big_nohaplotig	CDS	12333007	12333471	.	+	0	Parent=FBgn0052351.1.mrna1;Target=FBgn0052351.1 1240 1704 +
Chr1	stalkie_big_nohaplotig	CDS	12333534	12333680	.	+	0	Parent=FBgn0052351.1.mrna1;Target=FBgn0052351.1 1705 1851 +
Chr1	gffcl	locus	12334094	12335711	.	.	.	ID=RLOC_00005777;geneIDs=FBgn0035916.1.path1,comp118800_c0_seq1.path1;transcripts=FBgn0035916.1.mrna1,comp118800_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12334094	12335711	.	-	.	ID=FBgn0035916.1.mrna1;geneID=FBgn0035916.1.path1;Name=FBgn0035916.1;Dir=sensecoverage=100.0;identity=99.9;matches=1166;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005777
Chr1	stalkie_big_nohaplotig	exon	12334094	12334205	99	-	.	Parent=FBgn0035916.1.mrna1;Target=FBgn0035916.1 1056 1167 +
Chr1	stalkie_big_nohaplotig	exon	12334271	12334393	100	-	.	Parent=FBgn0035916.1.mrna1;Target=FBgn0035916.1 933 1055 +
Chr1	stalkie_big_nohaplotig	exon	12334447	12334648	100	-	.	Parent=FBgn0035916.1.mrna1;Target=FBgn0035916.1 731 932 +
Chr1	stalkie_big_nohaplotig	exon	12334701	12334899	100	-	.	Parent=FBgn0035916.1.mrna1;Target=FBgn0035916.1 532 730 +
Chr1	stalkie_big_nohaplotig	exon	12334984	12334986	100	-	.	Parent=FBgn0035916.1.mrna1;Target=FBgn0035916.1 529 531 +
Chr1	stalkie_big_nohaplotig	exon	12335064	12335494	100	-	.	Parent=FBgn0035916.1.mrna1;Target=FBgn0035916.1 98 528 +
Chr1	stalkie_big_nohaplotig	exon	12335550	12335623	100	-	.	Parent=FBgn0035916.1.mrna1;Target=FBgn0035916.1 24 97 +
Chr1	stalkie_big_nohaplotig	exon	12335689	12335711	100	-	.	Parent=FBgn0035916.1.mrna1;Target=FBgn0035916.1 1 23 +
Chr1	stalkie_big_nohaplotig	CDS	12334094	12334205	.	-	1	Parent=FBgn0035916.1.mrna1;Target=FBgn0035916.1 1056 1167 +
Chr1	stalkie_big_nohaplotig	CDS	12334271	12334393	.	-	1	Parent=FBgn0035916.1.mrna1;Target=FBgn0035916.1 933 1055 +
Chr1	stalkie_big_nohaplotig	CDS	12334447	12334648	.	-	2	Parent=FBgn0035916.1.mrna1;Target=FBgn0035916.1 731 932 +
Chr1	stalkie_big_nohaplotig	CDS	12334701	12334899	.	-	0	Parent=FBgn0035916.1.mrna1;Target=FBgn0035916.1 532 730 +
Chr1	stalkie_big_nohaplotig	CDS	12334984	12334986	.	-	0	Parent=FBgn0035916.1.mrna1;Target=FBgn0035916.1 529 531 +
Chr1	stalkie_big_nohaplotig	CDS	12335064	12335494	.	-	2	Parent=FBgn0035916.1.mrna1;Target=FBgn0035916.1 98 528 +
Chr1	stalkie_big_nohaplotig	CDS	12335550	12335623	.	-	1	Parent=FBgn0035916.1.mrna1;Target=FBgn0035916.1 24 97 +
Chr1	stalkie_big_nohaplotig	CDS	12335689	12335711	.	-	0	Parent=FBgn0035916.1.mrna1;Target=FBgn0035916.1 1 23 +
Chr1	stalkie_big_nohaplotig	mRNA	12334880	12335087	.	+	.	ID=comp118800_c0_seq1.mrna1;geneID=comp118800_c0_seq1.path1;Name=comp118800_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=208;mismatches=0;indels=0;unknowns=0;Target=comp118800_c0_seq1 208 1 .;CDS_Target=comp118800_c0_seq1 77 3 .;locus=RLOC_00005777
Chr1	stalkie_big_nohaplotig	exon	12334880	12335087	100	+	.	Parent=comp118800_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12334882	12334956	.	+	0	Parent=comp118800_c0_seq1.mrna1
Chr1	gffcl	locus	12344960	12369918	.	+	.	ID=RLOC_00005778;geneIDs=FBgn0035917.1.path1,comp131580_c0_seq1.path1,comp162081_c1_seq1.path1;transcripts=FBgn0035917.1.mrna1,comp162081_c1_seq1.mrna1,comp131580_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12344960	12369918	.	+	.	ID=FBgn0035917.1.mrna1;geneID=FBgn0035917.1.path1;Name=FBgn0035917.1;Dir=sensecoverage=100.0;identity=99.8;matches=1222;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005778
Chr1	stalkie_big_nohaplotig	exon	12344960	12345082	100	+	.	Parent=FBgn0035917.1.mrna1;Target=FBgn0035917.1 1 123 +
Chr1	stalkie_big_nohaplotig	exon	12348353	12348621	99	+	.	Parent=FBgn0035917.1.mrna1;Target=FBgn0035917.1 124 392 +
Chr1	stalkie_big_nohaplotig	exon	12348680	12348881	100	+	.	Parent=FBgn0035917.1.mrna1;Target=FBgn0035917.1 393 594 +
Chr1	stalkie_big_nohaplotig	exon	12362209	12362302	100	+	.	Parent=FBgn0035917.1.mrna1;Target=FBgn0035917.1 595 688 +
Chr1	stalkie_big_nohaplotig	exon	12362361	12362467	100	+	.	Parent=FBgn0035917.1.mrna1;Target=FBgn0035917.1 689 795 +
Chr1	stalkie_big_nohaplotig	exon	12362596	12362675	100	+	.	Parent=FBgn0035917.1.mrna1;Target=FBgn0035917.1 796 875 +
Chr1	stalkie_big_nohaplotig	exon	12363095	12363163	100	+	.	Parent=FBgn0035917.1.mrna1;Target=FBgn0035917.1 876 944 +
Chr1	stalkie_big_nohaplotig	exon	12368032	12368185	99	+	.	Parent=FBgn0035917.1.mrna1;Target=FBgn0035917.1 945 1098 +
Chr1	stalkie_big_nohaplotig	exon	12368802	12368843	100	+	.	Parent=FBgn0035917.1.mrna1;Target=FBgn0035917.1 1099 1140 +
Chr1	stalkie_big_nohaplotig	exon	12369835	12369918	100	+	.	Parent=FBgn0035917.1.mrna1;Target=FBgn0035917.1 1141 1224 +
Chr1	stalkie_big_nohaplotig	CDS	12344960	12345082	.	+	0	Parent=FBgn0035917.1.mrna1;Target=FBgn0035917.1 1 123 +
Chr1	stalkie_big_nohaplotig	CDS	12348353	12348621	.	+	0	Parent=FBgn0035917.1.mrna1;Target=FBgn0035917.1 124 392 +
Chr1	stalkie_big_nohaplotig	CDS	12348680	12348881	.	+	1	Parent=FBgn0035917.1.mrna1;Target=FBgn0035917.1 393 594 +
Chr1	stalkie_big_nohaplotig	CDS	12362209	12362302	.	+	0	Parent=FBgn0035917.1.mrna1;Target=FBgn0035917.1 595 688 +
Chr1	stalkie_big_nohaplotig	CDS	12362361	12362467	.	+	2	Parent=FBgn0035917.1.mrna1;Target=FBgn0035917.1 689 795 +
Chr1	stalkie_big_nohaplotig	CDS	12362596	12362675	.	+	0	Parent=FBgn0035917.1.mrna1;Target=FBgn0035917.1 796 875 +
Chr1	stalkie_big_nohaplotig	CDS	12363095	12363163	.	+	1	Parent=FBgn0035917.1.mrna1;Target=FBgn0035917.1 876 944 +
Chr1	stalkie_big_nohaplotig	CDS	12368032	12368185	.	+	1	Parent=FBgn0035917.1.mrna1;Target=FBgn0035917.1 945 1098 +
Chr1	stalkie_big_nohaplotig	CDS	12368802	12368843	.	+	0	Parent=FBgn0035917.1.mrna1;Target=FBgn0035917.1 1099 1140 +
Chr1	stalkie_big_nohaplotig	CDS	12369835	12369918	.	+	0	Parent=FBgn0035917.1.mrna1;Target=FBgn0035917.1 1141 1224 +
Chr1	stalkie_big_nohaplotig	mRNA	12363140	12365440	.	+	.	ID=comp162081_c1_seq1.mrna1;geneID=comp162081_c1_seq1.path1;Name=comp162081_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=2185;mismatches=24;indels=12;unknowns=0;Target=comp162081_c1_seq1 245 129 .;locus=RLOC_00005778
Chr1	stalkie_big_nohaplotig	exon	12363140	12363691	98	+	.	Parent=comp162081_c1_seq1.mrna1;Target=comp162081_c1_seq1 552 1 .
Chr1	stalkie_big_nohaplotig	exon	12363784	12365440	98	+	.	Parent=comp162081_c1_seq1.mrna1;Target=comp162081_c1_seq1 2222 554 .
Chr1	stalkie_big_nohaplotig	CDS	12363268	12363384	.	+	0	Parent=comp162081_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12368163	12368823	.	+	.	ID=comp131580_c0_seq1.mrna1;geneID=comp131580_c0_seq1.path1;Name=comp131580_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=660;mismatches=1;indels=0;unknowns=0;Target=comp131580_c0_seq1 661 1 .;CDS_Target=comp131580_c0_seq1 208 110 .;locus=RLOC_00005778
Chr1	stalkie_big_nohaplotig	exon	12368163	12368823	99	+	.	Parent=comp131580_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12368272	12368370	.	+	0	Parent=comp131580_c0_seq1.mrna1
Chr1	gffcl	locus	12359327	12361273	.	-	.	ID=RLOC_00005779;geneIDs=FBgn0035918.1.path1;transcripts=FBgn0035918.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12359327	12361273	.	-	.	ID=FBgn0035918.1.mrna1;geneID=FBgn0035918.1.path1;Name=FBgn0035918.1;Dir=sensecoverage=100.0;identity=99.8;matches=1886;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005779
Chr1	stalkie_big_nohaplotig	exon	12359327	12359742	99	-	.	Parent=FBgn0035918.1.mrna1;Target=FBgn0035918.1 1475 1890 +
Chr1	stalkie_big_nohaplotig	exon	12359800	12361273	99	-	.	Parent=FBgn0035918.1.mrna1;Target=FBgn0035918.1 1 1474 +
Chr1	stalkie_big_nohaplotig	CDS	12359327	12359742	.	-	2	Parent=FBgn0035918.1.mrna1;Target=FBgn0035918.1 1475 1890 +
Chr1	stalkie_big_nohaplotig	CDS	12359800	12361273	.	-	0	Parent=FBgn0035918.1.mrna1;Target=FBgn0035918.1 1 1474 +
Chr1	gffcl	locus	12365685	12366906	.	+	.	ID=RLOC_00005780;geneIDs=comp158673_c0_seq1.path1;transcripts=comp158673_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12365685	12366906	.	+	.	ID=comp158673_c0_seq1.mrna1;geneID=comp158673_c0_seq1.path1;Name=comp158673_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=1200;mismatches=17;indels=6;unknowns=0;Target=comp158673_c0_seq1 1218 1 .;CDS_Target=comp158673_c0_seq1 716 516 .;locus=RLOC_00005780
Chr1	stalkie_big_nohaplotig	exon	12365685	12366906	98	+	.	Parent=comp158673_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12366199	12366399	.	+	0	Parent=comp158673_c0_seq1.mrna1
Chr1	gffcl	locus	12379011	12388513	.	+	.	ID=RLOC_00005781;geneIDs=FBgn0052029.1.path1;transcripts=FBgn0052029.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12379011	12388513	.	+	.	ID=FBgn0052029.1.mrna1;geneID=FBgn0052029.1.path1;Name=FBgn0052029.1;Dir=sensecoverage=100.0;identity=99.6;matches=795;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005781
Chr1	stalkie_big_nohaplotig	exon	12379011	12379253	100	+	.	Parent=FBgn0052029.1.mrna1;Target=FBgn0052029.1 1 243 +
Chr1	stalkie_big_nohaplotig	exon	12379381	12379455	96	+	.	Parent=FBgn0052029.1.mrna1;Target=FBgn0052029.1 244 318 +
Chr1	stalkie_big_nohaplotig	exon	12379586	12379738	100	+	.	Parent=FBgn0052029.1.mrna1;Target=FBgn0052029.1 319 471 +
Chr1	stalkie_big_nohaplotig	exon	12388187	12388513	100	+	.	Parent=FBgn0052029.1.mrna1;Target=FBgn0052029.1 472 798 +
Chr1	stalkie_big_nohaplotig	CDS	12379011	12379253	.	+	0	Parent=FBgn0052029.1.mrna1;Target=FBgn0052029.1 1 243 +
Chr1	stalkie_big_nohaplotig	CDS	12379381	12379455	.	+	0	Parent=FBgn0052029.1.mrna1;Target=FBgn0052029.1 244 318 +
Chr1	stalkie_big_nohaplotig	CDS	12379586	12379738	.	+	0	Parent=FBgn0052029.1.mrna1;Target=FBgn0052029.1 319 471 +
Chr1	stalkie_big_nohaplotig	CDS	12388187	12388513	.	+	0	Parent=FBgn0052029.1.mrna1;Target=FBgn0052029.1 472 798 +
Chr1	gffcl	locus	12382412	12399220	.	-	.	ID=RLOC_00005782;geneIDs=FBgn0000121.1.path1,comp161977_c0_seq1.path1;transcripts=comp161977_c0_seq1.mrna1,FBgn0000121.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12382412	12398366	.	-	.	ID=comp161977_c0_seq1.mrna1;geneID=comp161977_c0_seq1.path1;Name=comp161977_c0_seq1;Dir=indeterminatecoverage=80.2;identity=98.1;matches=1216;mismatches=21;indels=2;unknowns=0;Target=comp161977_c0_seq1 449 336 .;locus=RLOC_00005782
Chr1	stalkie_big_nohaplotig	exon	12382412	12382419	100	-	.	Parent=comp161977_c0_seq1.mrna1;Target=comp161977_c0_seq1 1237 1230 .
Chr1	stalkie_big_nohaplotig	exon	12382530	12382542	84	-	.	Parent=comp161977_c0_seq1.mrna1;Target=comp161977_c0_seq1 1229 1217 .
Chr1	stalkie_big_nohaplotig	exon	12383082	12383086	100	-	.	Parent=comp161977_c0_seq1.mrna1;Target=comp161977_c0_seq1 1216 1212 .
Chr1	stalkie_big_nohaplotig	exon	12390649	12390650	100	-	.	Parent=comp161977_c0_seq1.mrna1;Target=comp161977_c0_seq1 1211 1210 .
Chr1	stalkie_big_nohaplotig	exon	12394231	12394235	100	-	.	Parent=comp161977_c0_seq1.mrna1;Target=comp161977_c0_seq1 1209 1205 .
Chr1	stalkie_big_nohaplotig	exon	12397161	12398366	98	-	.	Parent=comp161977_c0_seq1.mrna1;Target=comp161977_c0_seq1 1204 1 .
Chr1	stalkie_big_nohaplotig	CDS	12397918	12398031	.	-	0	Parent=comp161977_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12396494	12399220	.	-	.	ID=FBgn0000121.1.mrna1;geneID=FBgn0000121.1.path1;Name=FBgn0000121.1;Dir=sensecoverage=100.0;identity=99.7;matches=1217;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005782
Chr1	stalkie_big_nohaplotig	exon	12396494	12396645	100	-	.	Parent=FBgn0000121.1.mrna1;Target=FBgn0000121.1 1070 1221 +
Chr1	stalkie_big_nohaplotig	exon	12396720	12396914	100	-	.	Parent=FBgn0000121.1.mrna1;Target=FBgn0000121.1 875 1069 +
Chr1	stalkie_big_nohaplotig	exon	12398347	12399220	99	-	.	Parent=FBgn0000121.1.mrna1;Target=FBgn0000121.1 1 874 +
Chr1	stalkie_big_nohaplotig	CDS	12396494	12396645	.	-	2	Parent=FBgn0000121.1.mrna1;Target=FBgn0000121.1 1070 1221 +
Chr1	stalkie_big_nohaplotig	CDS	12396720	12396914	.	-	2	Parent=FBgn0000121.1.mrna1;Target=FBgn0000121.1 875 1069 +
Chr1	stalkie_big_nohaplotig	CDS	12398347	12399220	.	-	0	Parent=FBgn0000121.1.mrna1;Target=FBgn0000121.1 1 874 +
Chr1	gffcl	locus	12396144	12405562	.	+	.	ID=RLOC_00005783;geneIDs=FBgn0035922.1.path1;transcripts=FBgn0035922.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12396144	12405562	.	+	.	ID=FBgn0035922.1.mrna1;geneID=FBgn0035922.1.path1;Name=FBgn0035922.1;Dir=sensecoverage=100.0;identity=99.6;matches=1037;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005783
Chr1	stalkie_big_nohaplotig	exon	12396144	12396176	100	+	.	Parent=FBgn0035922.1.mrna1;Target=FBgn0035922.1 1 33 +
Chr1	stalkie_big_nohaplotig	exon	12404498	12405345	99	+	.	Parent=FBgn0035922.1.mrna1;Target=FBgn0035922.1 34 881 +
Chr1	stalkie_big_nohaplotig	exon	12405403	12405562	98	+	.	Parent=FBgn0035922.1.mrna1;Target=FBgn0035922.1 882 1041 +
Chr1	stalkie_big_nohaplotig	CDS	12396144	12396176	.	+	0	Parent=FBgn0035922.1.mrna1;Target=FBgn0035922.1 1 33 +
Chr1	stalkie_big_nohaplotig	CDS	12404498	12405345	.	+	0	Parent=FBgn0035922.1.mrna1;Target=FBgn0035922.1 34 881 +
Chr1	stalkie_big_nohaplotig	CDS	12405403	12405562	.	+	1	Parent=FBgn0035922.1.mrna1;Target=FBgn0035922.1 882 1041 +
Chr1	gffcl	locus	12446614	12447544	.	+	.	ID=RLOC_00005784;geneIDs=comp138689_c1_seq1.path1;transcripts=comp138689_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12446614	12447544	.	+	.	ID=comp138689_c1_seq1.mrna1;geneID=comp138689_c1_seq1.path1;Name=comp138689_c1_seq1;Dir=sensecoverage=99.5;identity=99.2;matches=857;mismatches=1;indels=6;unknowns=0;locus=RLOC_00005784
Chr1	stalkie_big_nohaplotig	exon	12446614	12447202	99	+	.	Parent=comp138689_c1_seq1.mrna1;Target=comp138689_c1_seq1 5 593 +
Chr1	stalkie_big_nohaplotig	exon	12447270	12447544	97	+	.	Parent=comp138689_c1_seq1.mrna1;Target=comp138689_c1_seq1 594 862 +
Chr1	stalkie_big_nohaplotig	CDS	12447093	12447202	.	+	0	Parent=comp138689_c1_seq1.mrna1;Target=comp138689_c1_seq1 484 593 +
Chr1	stalkie_big_nohaplotig	CDS	12447270	12447312	.	+	1	Parent=comp138689_c1_seq1.mrna1;Target=comp138689_c1_seq1 594 636 +
Chr1	gffcl	locus	12460782	12465026	.	+	.	ID=RLOC_00005785;geneIDs=FBgn0001168.1.path1,comp148233_c0_seq1.path1;transcripts=FBgn0001168.1.mrna1,comp148233_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12460782	12465026	.	+	.	ID=FBgn0001168.1.mrna1;geneID=FBgn0001168.1.path1;Name=FBgn0001168.1;Dir=sensecoverage=100.0;identity=99.6;matches=765;mismatches=2;indels=1;unknowns=0;Target=FBgn0001168.1 3 32 +;locus=RLOC_00005785
Chr1	stalkie_big_nohaplotig	exon	12460782	12460918	98	+	.	Parent=FBgn0001168.1.mrna1;Target=FBgn0001168.1 1 138 +
Chr1	stalkie_big_nohaplotig	exon	12464080	12464175	100	+	.	Parent=FBgn0001168.1.mrna1;Target=FBgn0001168.1 139 234 +
Chr1	stalkie_big_nohaplotig	exon	12464493	12465026	99	+	.	Parent=FBgn0001168.1.mrna1;Target=FBgn0001168.1 235 768 +
Chr1	stalkie_big_nohaplotig	CDS	12460784	12460812	.	+	0	Parent=FBgn0001168.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12463218	12464101	.	+	.	ID=comp148233_c0_seq1.mrna1;geneID=comp148233_c0_seq1.path1;Name=comp148233_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=883;mismatches=1;indels=0;unknowns=0;Target=comp148233_c0_seq1 884 1 .;CDS_Target=comp148233_c0_seq1 827 690 .;locus=RLOC_00005785
Chr1	stalkie_big_nohaplotig	exon	12463218	12464101	99	+	.	Parent=comp148233_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12463907	12464044	.	+	0	Parent=comp148233_c0_seq1.mrna1
Chr1	gffcl	locus	12533628	12534572	.	-	.	ID=RLOC_00005786;geneIDs=FBgn0011509.1.path1;transcripts=FBgn0011509.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12533628	12534572	.	-	.	ID=FBgn0011509.1.mrna1;geneID=FBgn0011509.1.path1;Name=FBgn0011509.1;Dir=sensecoverage=100.0;identity=99.5;matches=734;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005786
Chr1	stalkie_big_nohaplotig	exon	12533628	12533820	99	-	.	Parent=FBgn0011509.1.mrna1;Target=FBgn0011509.1 546 738 +
Chr1	stalkie_big_nohaplotig	exon	12533883	12534008	98	-	.	Parent=FBgn0011509.1.mrna1;Target=FBgn0011509.1 420 545 +
Chr1	stalkie_big_nohaplotig	exon	12534092	12534398	99	-	.	Parent=FBgn0011509.1.mrna1;Target=FBgn0011509.1 113 419 +
Chr1	stalkie_big_nohaplotig	exon	12534461	12534572	100	-	.	Parent=FBgn0011509.1.mrna1;Target=FBgn0011509.1 1 112 +
Chr1	stalkie_big_nohaplotig	CDS	12533628	12533820	.	-	1	Parent=FBgn0011509.1.mrna1;Target=FBgn0011509.1 546 738 +
Chr1	stalkie_big_nohaplotig	CDS	12533883	12534008	.	-	1	Parent=FBgn0011509.1.mrna1;Target=FBgn0011509.1 420 545 +
Chr1	stalkie_big_nohaplotig	CDS	12534092	12534398	.	-	2	Parent=FBgn0011509.1.mrna1;Target=FBgn0011509.1 113 419 +
Chr1	stalkie_big_nohaplotig	CDS	12534461	12534572	.	-	0	Parent=FBgn0011509.1.mrna1;Target=FBgn0011509.1 1 112 +
Chr1	stalkie_big_nohaplotig	mRNA	12549644	12560116	.	+	.	ID=FBgn0250789.1.mrna1;geneID=FBgn0250789.1.path1;Name=FBgn0250789.1;Dir=sensecoverage=100.0;identity=99.7;matches=7242;mismatches=21;indels=0;unknowns=0;locus=RLOC_00005787
Chr1	stalkie_big_nohaplotig	exon	12549644	12553651	99	+	.	Parent=FBgn0250789.1.mrna1;Target=FBgn0250789.1 1 4008 +
Chr1	stalkie_big_nohaplotig	exon	12555798	12557721	99	+	.	Parent=FBgn0250789.1.mrna1;Target=FBgn0250789.1 4009 5932 +
Chr1	stalkie_big_nohaplotig	exon	12557794	12558397	99	+	.	Parent=FBgn0250789.1.mrna1;Target=FBgn0250789.1 5933 6536 +
Chr1	stalkie_big_nohaplotig	exon	12559334	12559934	99	+	.	Parent=FBgn0250789.1.mrna1;Target=FBgn0250789.1 6537 7137 +
Chr1	stalkie_big_nohaplotig	exon	12559991	12560116	100	+	.	Parent=FBgn0250789.1.mrna1;Target=FBgn0250789.1 7138 7263 +
Chr1	stalkie_big_nohaplotig	CDS	12549644	12553651	.	+	0	Parent=FBgn0250789.1.mrna1;Target=FBgn0250789.1 1 4008 +
Chr1	stalkie_big_nohaplotig	CDS	12555798	12557721	.	+	0	Parent=FBgn0250789.1.mrna1;Target=FBgn0250789.1 4009 5932 +
Chr1	stalkie_big_nohaplotig	CDS	12557794	12558397	.	+	2	Parent=FBgn0250789.1.mrna1;Target=FBgn0250789.1 5933 6536 +
Chr1	stalkie_big_nohaplotig	CDS	12559334	12559934	.	+	1	Parent=FBgn0250789.1.mrna1;Target=FBgn0250789.1 6537 7137 +
Chr1	stalkie_big_nohaplotig	CDS	12559991	12560116	.	+	0	Parent=FBgn0250789.1.mrna1;Target=FBgn0250789.1 7138 7263 +
Chr1	stalkie_big_nohaplotig	mRNA	12558990	12559355	.	-	.	ID=comp220906_c0_seq1.mrna1;geneID=comp220906_c0_seq1.path1;Name=comp220906_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=366;mismatches=0;indels=0;unknowns=0;Target=comp220906_c0_seq1 366 1 .;CDS_Target=comp220906_c0_seq1 315 244 .;locus=RLOC_00005787
Chr1	stalkie_big_nohaplotig	exon	12558990	12559355	100	-	.	Parent=comp220906_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12559041	12559112	.	-	0	Parent=comp220906_c0_seq1.mrna1
Chr1	gffcl	locus	12538581	12538964	.	-	.	ID=RLOC_00005788;geneIDs=FBgn0035469.1.path1;transcripts=FBgn0035469.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12538581	12538964	.	-	.	ID=FBgn0035469.1.mrna1;geneID=FBgn0035469.1.path1;Name=FBgn0035469.1;Dir=sensecoverage=100.0;identity=99.7;matches=317;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005788
Chr1	stalkie_big_nohaplotig	exon	12538581	12538764	99	-	.	Parent=FBgn0035469.1.mrna1;Target=FBgn0035469.1 135 318 +
Chr1	stalkie_big_nohaplotig	exon	12538831	12538964	100	-	.	Parent=FBgn0035469.1.mrna1;Target=FBgn0035469.1 1 134 +
Chr1	stalkie_big_nohaplotig	CDS	12538581	12538764	.	-	1	Parent=FBgn0035469.1.mrna1;Target=FBgn0035469.1 135 318 +
Chr1	stalkie_big_nohaplotig	CDS	12538831	12538964	.	-	0	Parent=FBgn0035469.1.mrna1;Target=FBgn0035469.1 1 134 +
Chr1	gffcl	locus	12543896	12547458	.	+	.	ID=RLOC_00005789;geneIDs=FBgn0024510.1.path1;transcripts=FBgn0024510.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12543896	12547458	.	+	.	ID=FBgn0024510.1.mrna1;geneID=FBgn0024510.1.path1;Name=FBgn0024510.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=3543;mismatches=20;indels=1;unknowns=0;Target=FBgn0024510.1 3564 1 .;CDS_Target=FBgn0024510.1 170 3 .;locus=RLOC_00005789
Chr1	stalkie_big_nohaplotig	exon	12543896	12547458	99	+	.	Parent=FBgn0024510.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12543898	12544064	.	+	0	Parent=FBgn0024510.1.mrna1
Chr1	gffcl	locus	12561329	12562144	.	-	.	ID=RLOC_00005790;geneIDs=FBgn0035272.1.path1;transcripts=FBgn0035272.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12561329	12562144	.	-	.	ID=FBgn0035272.1.mrna1;geneID=FBgn0035272.1.path1;Name=FBgn0035272.1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=804;mismatches=12;indels=0;unknowns=0;Target=FBgn0035272.1 816 1 .;locus=RLOC_00005790
Chr1	stalkie_big_nohaplotig	exon	12561329	12562144	98	-	.	Parent=FBgn0035272.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12561329	12562144	.	-	0	Parent=FBgn0035272.1.mrna1
Chr1	gffcl	locus	12562576	12563822	.	+	.	ID=RLOC_00005791;geneIDs=FBgn0027903.1.path1;transcripts=FBgn0027903.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12562576	12563822	.	+	.	ID=FBgn0027903.1.mrna1;geneID=FBgn0027903.1.path1;Name=FBgn0027903.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1240;mismatches=7;indels=1;unknowns=0;Target=FBgn0027903.1 1248 1 .;locus=RLOC_00005791
Chr1	stalkie_big_nohaplotig	exon	12562576	12563822	99	+	.	Parent=FBgn0027903.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12562576	12563822	.	+	0	Parent=FBgn0027903.1.mrna1
Chr1	gffcl	locus	12564051	12564380	.	-	.	ID=RLOC_00005792;geneIDs=FBgn0035271.1.path1;transcripts=FBgn0035271.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12564051	12564380	.	-	.	ID=FBgn0035271.1.mrna1;geneID=FBgn0035271.1.path1;Name=FBgn0035271.1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=325;mismatches=5;indels=0;unknowns=0;Target=FBgn0035271.1 330 1 .;CDS_Target=FBgn0035271.1 330 43 .;locus=RLOC_00005792
Chr1	stalkie_big_nohaplotig	exon	12564051	12564380	98	-	.	Parent=FBgn0035271.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12564051	12564338	.	-	0	Parent=FBgn0035271.1.mrna1
Chr1	gffcl	locus	12569757	12572871	.	+	.	ID=RLOC_00005793;geneIDs=FBgn0035270.1.path1;transcripts=FBgn0035270.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12569757	12572871	.	+	.	ID=FBgn0035270.1.mrna1;geneID=FBgn0035270.1.path1;Name=FBgn0035270.1;Dir=sensecoverage=100.0;identity=99.6;matches=2034;mismatches=8;indels=1;unknowns=0;locus=RLOC_00005793
Chr1	stalkie_big_nohaplotig	exon	12569757	12569936	99	+	.	Parent=FBgn0035270.1.mrna1;Target=FBgn0035270.1 1 180 +
Chr1	stalkie_big_nohaplotig	exon	12570001	12570423	98	+	.	Parent=FBgn0035270.1.mrna1;Target=FBgn0035270.1 181 603 +
Chr1	stalkie_big_nohaplotig	exon	12570481	12571152	99	+	.	Parent=FBgn0035270.1.mrna1;Target=FBgn0035270.1 604 1275 +
Chr1	stalkie_big_nohaplotig	exon	12572105	12572871	99	+	.	Parent=FBgn0035270.1.mrna1;Target=FBgn0035270.1 1276 2043 +
Chr1	stalkie_big_nohaplotig	CDS	12569757	12569936	.	+	0	Parent=FBgn0035270.1.mrna1;Target=FBgn0035270.1 1 180 +
Chr1	stalkie_big_nohaplotig	CDS	12570001	12570423	.	+	0	Parent=FBgn0035270.1.mrna1;Target=FBgn0035270.1 181 603 +
Chr1	stalkie_big_nohaplotig	CDS	12570481	12571152	.	+	0	Parent=FBgn0035270.1.mrna1;Target=FBgn0035270.1 604 1275 +
Chr1	stalkie_big_nohaplotig	CDS	12572105	12572871	.	+	0	Parent=FBgn0035270.1.mrna1;Target=FBgn0035270.1 1276 2043 +
Chr1	gffcl	locus	12578090	12586746	.	+	.	ID=RLOC_00005794;geneIDs=FBgn0013811.1.path1;transcripts=FBgn0013811.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12578090	12586746	.	+	.	ID=FBgn0013811.1.mrna1;geneID=FBgn0013811.1.path1;Name=FBgn0013811.1;Dir=sensecoverage=100.0;identity=99.6;matches=7725;mismatches=33;indels=0;unknowns=0;locus=RLOC_00005794
Chr1	stalkie_big_nohaplotig	exon	12578090	12578875	99	+	.	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 1 786 +
Chr1	stalkie_big_nohaplotig	exon	12579050	12579364	99	+	.	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 787 1101 +
Chr1	stalkie_big_nohaplotig	exon	12579421	12579663	100	+	.	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 1102 1344 +
Chr1	stalkie_big_nohaplotig	exon	12579726	12579950	100	+	.	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 1345 1569 +
Chr1	stalkie_big_nohaplotig	exon	12580013	12580177	100	+	.	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 1570 1734 +
Chr1	stalkie_big_nohaplotig	exon	12580350	12584826	99	+	.	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 1735 6211 +
Chr1	stalkie_big_nohaplotig	exon	12584893	12585054	100	+	.	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 6212 6373 +
Chr1	stalkie_big_nohaplotig	exon	12585123	12585280	100	+	.	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 6374 6531 +
Chr1	stalkie_big_nohaplotig	exon	12585337	12586082	99	+	.	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 6532 7277 +
Chr1	stalkie_big_nohaplotig	exon	12586144	12586293	97	+	.	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 7278 7427 +
Chr1	stalkie_big_nohaplotig	exon	12586357	12586495	98	+	.	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 7428 7566 +
Chr1	stalkie_big_nohaplotig	exon	12586555	12586746	98	+	.	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 7567 7758 +
Chr1	stalkie_big_nohaplotig	CDS	12578090	12578875	.	+	0	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 1 786 +
Chr1	stalkie_big_nohaplotig	CDS	12579050	12579364	.	+	0	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 787 1101 +
Chr1	stalkie_big_nohaplotig	CDS	12579421	12579663	.	+	0	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 1102 1344 +
Chr1	stalkie_big_nohaplotig	CDS	12579726	12579950	.	+	0	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 1345 1569 +
Chr1	stalkie_big_nohaplotig	CDS	12580013	12580177	.	+	0	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 1570 1734 +
Chr1	stalkie_big_nohaplotig	CDS	12580350	12584826	.	+	0	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 1735 6211 +
Chr1	stalkie_big_nohaplotig	CDS	12584893	12585054	.	+	2	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 6212 6373 +
Chr1	stalkie_big_nohaplotig	CDS	12585123	12585280	.	+	2	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 6374 6531 +
Chr1	stalkie_big_nohaplotig	CDS	12585337	12586082	.	+	0	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 6532 7277 +
Chr1	stalkie_big_nohaplotig	CDS	12586144	12586293	.	+	1	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 7278 7427 +
Chr1	stalkie_big_nohaplotig	CDS	12586357	12586495	.	+	1	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 7428 7566 +
Chr1	stalkie_big_nohaplotig	CDS	12586555	12586746	.	+	0	Parent=FBgn0013811.1.mrna1;Target=FBgn0013811.1 7567 7758 +
Chr1	gffcl	locus	12587001	12590050	.	-	.	ID=RLOC_00005795;geneIDs=FBgn0035268.1.path1;transcripts=FBgn0035268.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12587001	12590050	.	-	.	ID=FBgn0035268.1.mrna1;geneID=FBgn0035268.1.path1;Name=FBgn0035268.1;Dir=sensecoverage=99.6;identity=99.6;matches=2331;mismatches=9;indels=0;unknowns=0;locus=RLOC_00005795
Chr1	stalkie_big_nohaplotig	exon	12587001	12587225	99	-	.	Parent=FBgn0035268.1.mrna1;Target=FBgn0035268.1 2125 2349 +
Chr1	stalkie_big_nohaplotig	exon	12587291	12587383	100	-	.	Parent=FBgn0035268.1.mrna1;Target=FBgn0035268.1 2032 2124 +
Chr1	stalkie_big_nohaplotig	exon	12587446	12587590	99	-	.	Parent=FBgn0035268.1.mrna1;Target=FBgn0035268.1 1887 2031 +
Chr1	stalkie_big_nohaplotig	exon	12587718	12587860	98	-	.	Parent=FBgn0035268.1.mrna1;Target=FBgn0035268.1 1744 1886 +
Chr1	stalkie_big_nohaplotig	exon	12587923	12588804	99	-	.	Parent=FBgn0035268.1.mrna1;Target=FBgn0035268.1 862 1743 +
Chr1	stalkie_big_nohaplotig	exon	12588864	12588959	100	-	.	Parent=FBgn0035268.1.mrna1;Target=FBgn0035268.1 766 861 +
Chr1	stalkie_big_nohaplotig	exon	12589017	12589244	100	-	.	Parent=FBgn0035268.1.mrna1;Target=FBgn0035268.1 538 765 +
Chr1	stalkie_big_nohaplotig	exon	12589465	12589816	100	-	.	Parent=FBgn0035268.1.mrna1;Target=FBgn0035268.1 186 537 +
Chr1	stalkie_big_nohaplotig	exon	12589875	12590050	98	-	.	Parent=FBgn0035268.1.mrna1;Target=FBgn0035268.1 10 185 +
Chr1	stalkie_big_nohaplotig	CDS	12587001	12587225	.	-	0	Parent=FBgn0035268.1.mrna1;Target=FBgn0035268.1 2125 2349 +
Chr1	stalkie_big_nohaplotig	CDS	12587291	12587383	.	-	0	Parent=FBgn0035268.1.mrna1;Target=FBgn0035268.1 2032 2124 +
Chr1	stalkie_big_nohaplotig	CDS	12587446	12587590	.	-	1	Parent=FBgn0035268.1.mrna1;Target=FBgn0035268.1 1887 2031 +
Chr1	stalkie_big_nohaplotig	CDS	12587718	12587860	.	-	0	Parent=FBgn0035268.1.mrna1;Target=FBgn0035268.1 1744 1886 +
Chr1	stalkie_big_nohaplotig	CDS	12587923	12588804	.	-	0	Parent=FBgn0035268.1.mrna1;Target=FBgn0035268.1 862 1743 +
Chr1	stalkie_big_nohaplotig	CDS	12588864	12588959	.	-	0	Parent=FBgn0035268.1.mrna1;Target=FBgn0035268.1 766 861 +
Chr1	stalkie_big_nohaplotig	CDS	12589017	12589244	.	-	0	Parent=FBgn0035268.1.mrna1;Target=FBgn0035268.1 538 765 +
Chr1	stalkie_big_nohaplotig	CDS	12589465	12589816	.	-	1	Parent=FBgn0035268.1.mrna1;Target=FBgn0035268.1 186 537 +
Chr1	stalkie_big_nohaplotig	CDS	12589875	12590050	.	-	0	Parent=FBgn0035268.1.mrna1;Target=FBgn0035268.1 10 185 +
Chr1	gffcl	locus	12603602	12605285	.	+	.	ID=RLOC_00005796;geneIDs=FBgn0022702.1.path1;transcripts=FBgn0022702.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12603602	12605285	.	+	.	ID=FBgn0022702.1.mrna1;geneID=FBgn0022702.1.path1;Name=FBgn0022702.1;Dir=sensecoverage=99.9;identity=99.8;matches=1501;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005796
Chr1	stalkie_big_nohaplotig	exon	12603602	12603717	100	+	.	Parent=FBgn0022702.1.mrna1;Target=FBgn0022702.1 3 118 +
Chr1	stalkie_big_nohaplotig	exon	12603775	12603939	100	+	.	Parent=FBgn0022702.1.mrna1;Target=FBgn0022702.1 119 283 +
Chr1	stalkie_big_nohaplotig	exon	12604003	12604508	99	+	.	Parent=FBgn0022702.1.mrna1;Target=FBgn0022702.1 284 789 +
Chr1	stalkie_big_nohaplotig	exon	12604569	12605285	99	+	.	Parent=FBgn0022702.1.mrna1;Target=FBgn0022702.1 790 1506 +
Chr1	stalkie_big_nohaplotig	CDS	12603603	12603717	.	+	0	Parent=FBgn0022702.1.mrna1;Target=FBgn0022702.1 4 118 +
Chr1	stalkie_big_nohaplotig	CDS	12603775	12603939	.	+	2	Parent=FBgn0022702.1.mrna1;Target=FBgn0022702.1 119 283 +
Chr1	stalkie_big_nohaplotig	CDS	12604003	12604508	.	+	2	Parent=FBgn0022702.1.mrna1;Target=FBgn0022702.1 284 789 +
Chr1	stalkie_big_nohaplotig	CDS	12604569	12605285	.	+	0	Parent=FBgn0022702.1.mrna1;Target=FBgn0022702.1 790 1506 +
Chr1	gffcl	locus	12606660	12607198	.	+	.	ID=RLOC_00005797;geneIDs=comp135360_c0_seq1.path1;transcripts=comp135360_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12606660	12607198	.	+	.	ID=comp135360_c0_seq1.mrna1;geneID=comp135360_c0_seq1.path1;Name=comp135360_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=537;mismatches=2;indels=0;unknowns=0;Target=comp135360_c0_seq1 539 1 .;CDS_Target=comp135360_c0_seq1 72 1 .;locus=RLOC_00005797
Chr1	stalkie_big_nohaplotig	exon	12606660	12607198	99	+	.	Parent=comp135360_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12606660	12606731	.	+	0	Parent=comp135360_c0_seq1.mrna1
Chr1	gffcl	locus	12608573	12615657	.	-	.	ID=RLOC_00005798;geneIDs=FBgn0035267.1.path1;transcripts=FBgn0035267.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12608573	12615657	.	-	.	ID=FBgn0035267.1.mrna1;geneID=FBgn0035267.1.path1;Name=FBgn0035267.1;Dir=sensecoverage=100.0;identity=99.8;matches=3463;mismatches=8;indels=0;unknowns=0;locus=RLOC_00005798
Chr1	stalkie_big_nohaplotig	exon	12608573	12610565	99	-	.	Parent=FBgn0035267.1.mrna1;Target=FBgn0035267.1 1479 3471 +
Chr1	stalkie_big_nohaplotig	exon	12610622	12610766	100	-	.	Parent=FBgn0035267.1.mrna1;Target=FBgn0035267.1 1334 1478 +
Chr1	stalkie_big_nohaplotig	exon	12611725	12611821	100	-	.	Parent=FBgn0035267.1.mrna1;Target=FBgn0035267.1 1237 1333 +
Chr1	stalkie_big_nohaplotig	exon	12611880	12611972	100	-	.	Parent=FBgn0035267.1.mrna1;Target=FBgn0035267.1 1144 1236 +
Chr1	stalkie_big_nohaplotig	exon	12612046	12612108	100	-	.	Parent=FBgn0035267.1.mrna1;Target=FBgn0035267.1 1081 1143 +
Chr1	stalkie_big_nohaplotig	exon	12612180	12612349	100	-	.	Parent=FBgn0035267.1.mrna1;Target=FBgn0035267.1 911 1080 +
Chr1	stalkie_big_nohaplotig	exon	12614684	12614865	100	-	.	Parent=FBgn0035267.1.mrna1;Target=FBgn0035267.1 729 910 +
Chr1	stalkie_big_nohaplotig	exon	12614930	12615657	99	-	.	Parent=FBgn0035267.1.mrna1;Target=FBgn0035267.1 1 728 +
Chr1	stalkie_big_nohaplotig	CDS	12608573	12610565	.	-	1	Parent=FBgn0035267.1.mrna1;Target=FBgn0035267.1 1479 3471 +
Chr1	stalkie_big_nohaplotig	CDS	12610622	12610766	.	-	2	Parent=FBgn0035267.1.mrna1;Target=FBgn0035267.1 1334 1478 +
Chr1	stalkie_big_nohaplotig	CDS	12611725	12611821	.	-	0	Parent=FBgn0035267.1.mrna1;Target=FBgn0035267.1 1237 1333 +
Chr1	stalkie_big_nohaplotig	CDS	12611880	12611972	.	-	0	Parent=FBgn0035267.1.mrna1;Target=FBgn0035267.1 1144 1236 +
Chr1	stalkie_big_nohaplotig	CDS	12612046	12612108	.	-	0	Parent=FBgn0035267.1.mrna1;Target=FBgn0035267.1 1081 1143 +
Chr1	stalkie_big_nohaplotig	CDS	12612180	12612349	.	-	2	Parent=FBgn0035267.1.mrna1;Target=FBgn0035267.1 911 1080 +
Chr1	stalkie_big_nohaplotig	CDS	12614684	12614865	.	-	1	Parent=FBgn0035267.1.mrna1;Target=FBgn0035267.1 729 910 +
Chr1	stalkie_big_nohaplotig	CDS	12614930	12615657	.	-	0	Parent=FBgn0035267.1.mrna1;Target=FBgn0035267.1 1 728 +
Chr1	gffcl	locus	12619595	12620547	.	-	.	ID=RLOC_00005799;geneIDs=comp154095_c0_seq1.path1;transcripts=comp154095_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12619595	12620547	.	-	.	ID=comp154095_c0_seq1.mrna1;geneID=comp154095_c0_seq1.path1;Name=comp154095_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=941;mismatches=12;indels=5;unknowns=0;Target=comp154095_c0_seq1 958 1 .;CDS_Target=comp154095_c0_seq1 534 508 .;locus=RLOC_00005799
Chr1	stalkie_big_nohaplotig	exon	12619595	12620547	98	-	.	Parent=comp154095_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12620017	12620043	.	-	0	Parent=comp154095_c0_seq1.mrna1
Chr1	gffcl	locus	12620895	12630882	.	-	.	ID=RLOC_00005800;geneIDs=FBgn0259173.1.path1;transcripts=FBgn0259173.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12620895	12630882	.	-	.	ID=FBgn0259173.1.mrna1;geneID=FBgn0259173.1.path1;Name=FBgn0259173.1;Dir=sensecoverage=100.0;identity=99.6;matches=3691;mismatches=14;indels=0;unknowns=0;locus=RLOC_00005800
Chr1	stalkie_big_nohaplotig	exon	12620895	12621137	98	-	.	Parent=FBgn0259173.1.mrna1;Target=FBgn0259173.1 3463 3705 +
Chr1	stalkie_big_nohaplotig	exon	12623594	12623830	99	-	.	Parent=FBgn0259173.1.mrna1;Target=FBgn0259173.1 3226 3462 +
Chr1	stalkie_big_nohaplotig	exon	12624713	12624884	99	-	.	Parent=FBgn0259173.1.mrna1;Target=FBgn0259173.1 3054 3225 +
Chr1	stalkie_big_nohaplotig	exon	12626010	12626210	99	-	.	Parent=FBgn0259173.1.mrna1;Target=FBgn0259173.1 2853 3053 +
Chr1	stalkie_big_nohaplotig	exon	12626273	12626555	99	-	.	Parent=FBgn0259173.1.mrna1;Target=FBgn0259173.1 2570 2852 +
Chr1	stalkie_big_nohaplotig	exon	12626622	12626946	99	-	.	Parent=FBgn0259173.1.mrna1;Target=FBgn0259173.1 2245 2569 +
Chr1	stalkie_big_nohaplotig	exon	12628513	12628696	100	-	.	Parent=FBgn0259173.1.mrna1;Target=FBgn0259173.1 2061 2244 +
Chr1	stalkie_big_nohaplotig	exon	12628762	12630187	99	-	.	Parent=FBgn0259173.1.mrna1;Target=FBgn0259173.1 635 2060 +
Chr1	stalkie_big_nohaplotig	exon	12630249	12630882	100	-	.	Parent=FBgn0259173.1.mrna1;Target=FBgn0259173.1 1 634 +
Chr1	stalkie_big_nohaplotig	CDS	12620895	12621137	.	-	0	Parent=FBgn0259173.1.mrna1;Target=FBgn0259173.1 3463 3705 +
Chr1	stalkie_big_nohaplotig	CDS	12623594	12623830	.	-	0	Parent=FBgn0259173.1.mrna1;Target=FBgn0259173.1 3226 3462 +
Chr1	stalkie_big_nohaplotig	CDS	12624713	12624884	.	-	1	Parent=FBgn0259173.1.mrna1;Target=FBgn0259173.1 3054 3225 +
Chr1	stalkie_big_nohaplotig	CDS	12626010	12626210	.	-	1	Parent=FBgn0259173.1.mrna1;Target=FBgn0259173.1 2853 3053 +
Chr1	stalkie_big_nohaplotig	CDS	12626273	12626555	.	-	2	Parent=FBgn0259173.1.mrna1;Target=FBgn0259173.1 2570 2852 +
Chr1	stalkie_big_nohaplotig	CDS	12626622	12626946	.	-	0	Parent=FBgn0259173.1.mrna1;Target=FBgn0259173.1 2245 2569 +
Chr1	stalkie_big_nohaplotig	CDS	12628513	12628696	.	-	1	Parent=FBgn0259173.1.mrna1;Target=FBgn0259173.1 2061 2244 +
Chr1	stalkie_big_nohaplotig	CDS	12628762	12630187	.	-	2	Parent=FBgn0259173.1.mrna1;Target=FBgn0259173.1 635 2060 +
Chr1	stalkie_big_nohaplotig	CDS	12630249	12630882	.	-	0	Parent=FBgn0259173.1.mrna1;Target=FBgn0259173.1 1 634 +
Chr1	gffcl	locus	12622419	12622686	.	.	.	ID=RLOC_00005801;geneIDs=comp153905_c0_seq1.path1,comp153905_c0_seq1.path2;transcripts=comp153905_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12622419	12622686	.	+	.	ID=comp153905_c0_seq1.mrna1;geneID=comp153905_c0_seq1.path1;Name=comp153905_c0_seq1;Dir=indeterminatecoverage=50.2;identity=100.0;matches=268;mismatches=0;indels=0;unknowns=0;Target=comp153905_c0_seq1 269 2 .;locus=RLOC_00005801
Chr1	stalkie_big_nohaplotig	exon	12622419	12622686	100	+	.	Parent=comp153905_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12622592	12622681	.	+	0	Parent=comp153905_c0_seq1.mrna1
Chr1	gffcl	locus	12649510	12653771	.	-	.	ID=RLOC_00005802;geneIDs=FBgn0086694.1.path1;transcripts=FBgn0086694.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12649510	12653771	.	-	.	ID=FBgn0086694.1.mrna1;geneID=FBgn0086694.1.path1;Name=FBgn0086694.1;Dir=sensecoverage=100.0;identity=99.8;matches=3090;mismatches=6;indels=0;unknowns=0;locus=RLOC_00005802
Chr1	stalkie_big_nohaplotig	exon	12649510	12650599	99	-	.	Parent=FBgn0086694.1.mrna1;Target=FBgn0086694.1 2007 3096 +
Chr1	stalkie_big_nohaplotig	exon	12650903	12651158	99	-	.	Parent=FBgn0086694.1.mrna1;Target=FBgn0086694.1 1751 2006 +
Chr1	stalkie_big_nohaplotig	exon	12651229	12651424	100	-	.	Parent=FBgn0086694.1.mrna1;Target=FBgn0086694.1 1555 1750 +
Chr1	stalkie_big_nohaplotig	exon	12652162	12652593	100	-	.	Parent=FBgn0086694.1.mrna1;Target=FBgn0086694.1 1123 1554 +
Chr1	stalkie_big_nohaplotig	exon	12652650	12653771	100	-	.	Parent=FBgn0086694.1.mrna1;Target=FBgn0086694.1 1 1122 +
Chr1	stalkie_big_nohaplotig	CDS	12649510	12650599	.	-	1	Parent=FBgn0086694.1.mrna1;Target=FBgn0086694.1 2007 3096 +
Chr1	stalkie_big_nohaplotig	CDS	12650903	12651158	.	-	2	Parent=FBgn0086694.1.mrna1;Target=FBgn0086694.1 1751 2006 +
Chr1	stalkie_big_nohaplotig	CDS	12651229	12651424	.	-	0	Parent=FBgn0086694.1.mrna1;Target=FBgn0086694.1 1555 1750 +
Chr1	stalkie_big_nohaplotig	CDS	12652162	12652593	.	-	0	Parent=FBgn0086694.1.mrna1;Target=FBgn0086694.1 1123 1554 +
Chr1	stalkie_big_nohaplotig	CDS	12652650	12653771	.	-	0	Parent=FBgn0086694.1.mrna1;Target=FBgn0086694.1 1 1122 +
Chr1	gffcl	locus	12655352	12656903	.	-	.	ID=RLOC_00005803;geneIDs=FBgn0035638.1.path1;transcripts=FBgn0035638.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12655352	12656903	.	-	.	ID=FBgn0035638.1.mrna1;geneID=FBgn0035638.1.path1;Name=FBgn0035638.1;Dir=sensecoverage=100.0;identity=99.6;matches=1264;mismatches=5;indels=0;unknowns=0;locus=RLOC_00005803
Chr1	stalkie_big_nohaplotig	exon	12655352	12655928	99	-	.	Parent=FBgn0035638.1.mrna1;Target=FBgn0035638.1 693 1269 +
Chr1	stalkie_big_nohaplotig	exon	12655993	12656505	99	-	.	Parent=FBgn0035638.1.mrna1;Target=FBgn0035638.1 180 692 +
Chr1	stalkie_big_nohaplotig	exon	12656725	12656903	100	-	.	Parent=FBgn0035638.1.mrna1;Target=FBgn0035638.1 1 179 +
Chr1	stalkie_big_nohaplotig	CDS	12655352	12655928	.	-	1	Parent=FBgn0035638.1.mrna1;Target=FBgn0035638.1 693 1269 +
Chr1	stalkie_big_nohaplotig	CDS	12655993	12656505	.	-	1	Parent=FBgn0035638.1.mrna1;Target=FBgn0035638.1 180 692 +
Chr1	stalkie_big_nohaplotig	CDS	12656725	12656903	.	-	0	Parent=FBgn0035638.1.mrna1;Target=FBgn0035638.1 1 179 +
Chr1	gffcl	locus	12661469	12662254	.	-	.	ID=RLOC_00005804;geneIDs=comp155276_c0_seq1.path1;transcripts=comp155276_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12661469	12662254	.	-	.	ID=comp155276_c0_seq1.mrna1;geneID=comp155276_c0_seq1.path1;Name=comp155276_c0_seq1;Dir=indeterminatecoverage=97.4;identity=99.2;matches=782;mismatches=4;indels=2;unknowns=0;Target=comp155276_c0_seq1 809 22 .;CDS_Target=comp155276_c0_seq1 529 479 .;locus=RLOC_00005804
Chr1	stalkie_big_nohaplotig	exon	12661469	12662254	99	-	.	Parent=comp155276_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12661747	12661797	.	-	0	Parent=comp155276_c0_seq1.mrna1
Chr1	gffcl	locus	12663022	12663629	.	-	.	ID=RLOC_00005805;geneIDs=comp153359_c0_seq1.path1;transcripts=comp153359_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12663022	12663629	.	-	.	ID=comp153359_c0_seq1.mrna1;geneID=comp153359_c0_seq1.path1;Name=comp153359_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.3;matches=594;mismatches=14;indels=15;unknowns=0;Target=comp153359_c0_seq1 623 1 .;CDS_Target=comp153359_c0_seq1 253 137 .;locus=RLOC_00005805
Chr1	stalkie_big_nohaplotig	exon	12663022	12663629	95	-	.	Parent=comp153359_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12663391	12663493	.	-	0	Parent=comp153359_c0_seq1.mrna1
Chr1	gffcl	locus	12663794	12664546	.	+	.	ID=RLOC_00005806;geneIDs=comp158384_c0_seq1.path1;transcripts=comp158384_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12663794	12664546	.	+	.	ID=comp158384_c0_seq1.mrna1;geneID=comp158384_c0_seq1.path1;Name=comp158384_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.1;matches=744;mismatches=9;indels=13;unknowns=0;Target=comp158384_c0_seq1 766 1 .;CDS_Target=comp158384_c0_seq1 165 97 .;locus=RLOC_00005806
Chr1	stalkie_big_nohaplotig	exon	12663794	12664546	97	+	.	Parent=comp158384_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12663878	12663945	.	+	0	Parent=comp158384_c0_seq1.mrna1
Chr1	gffcl	locus	12666110	12691525	.	-	.	ID=RLOC_00005807;geneIDs=FBgn0015806.1.path1;transcripts=FBgn0015806.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12666110	12691525	.	-	.	ID=FBgn0015806.1.mrna1;geneID=FBgn0015806.1.path1;Name=FBgn0015806.1;Dir=sensecoverage=100.0;identity=99.9;matches=1403;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005807
Chr1	stalkie_big_nohaplotig	exon	12666110	12666337	99	-	.	Parent=FBgn0015806.1.mrna1;Target=FBgn0015806.1 1177 1404 +
Chr1	stalkie_big_nohaplotig	exon	12677861	12677968	100	-	.	Parent=FBgn0015806.1.mrna1;Target=FBgn0015806.1 1069 1176 +
Chr1	stalkie_big_nohaplotig	exon	12679420	12679668	100	-	.	Parent=FBgn0015806.1.mrna1;Target=FBgn0015806.1 820 1068 +
Chr1	stalkie_big_nohaplotig	exon	12679732	12679822	100	-	.	Parent=FBgn0015806.1.mrna1;Target=FBgn0015806.1 729 819 +
Chr1	stalkie_big_nohaplotig	exon	12679894	12680085	100	-	.	Parent=FBgn0015806.1.mrna1;Target=FBgn0015806.1 537 728 +
Chr1	stalkie_big_nohaplotig	exon	12680145	12680278	100	-	.	Parent=FBgn0015806.1.mrna1;Target=FBgn0015806.1 403 536 +
Chr1	stalkie_big_nohaplotig	exon	12680345	12680476	100	-	.	Parent=FBgn0015806.1.mrna1;Target=FBgn0015806.1 271 402 +
Chr1	stalkie_big_nohaplotig	exon	12680547	12680673	100	-	.	Parent=FBgn0015806.1.mrna1;Target=FBgn0015806.1 144 270 +
Chr1	stalkie_big_nohaplotig	exon	12684093	12684133	100	-	.	Parent=FBgn0015806.1.mrna1;Target=FBgn0015806.1 103 143 +
Chr1	stalkie_big_nohaplotig	exon	12691424	12691525	100	-	.	Parent=FBgn0015806.1.mrna1;Target=FBgn0015806.1 1 102 +
Chr1	stalkie_big_nohaplotig	CDS	12666110	12666337	.	-	0	Parent=FBgn0015806.1.mrna1;Target=FBgn0015806.1 1177 1404 +
Chr1	stalkie_big_nohaplotig	CDS	12677861	12677968	.	-	0	Parent=FBgn0015806.1.mrna1;Target=FBgn0015806.1 1069 1176 +
Chr1	stalkie_big_nohaplotig	CDS	12679420	12679668	.	-	0	Parent=FBgn0015806.1.mrna1;Target=FBgn0015806.1 820 1068 +
Chr1	stalkie_big_nohaplotig	CDS	12679732	12679822	.	-	1	Parent=FBgn0015806.1.mrna1;Target=FBgn0015806.1 729 819 +
Chr1	stalkie_big_nohaplotig	CDS	12679894	12680085	.	-	1	Parent=FBgn0015806.1.mrna1;Target=FBgn0015806.1 537 728 +
Chr1	stalkie_big_nohaplotig	CDS	12680145	12680278	.	-	0	Parent=FBgn0015806.1.mrna1;Target=FBgn0015806.1 403 536 +
Chr1	stalkie_big_nohaplotig	CDS	12680345	12680476	.	-	0	Parent=FBgn0015806.1.mrna1;Target=FBgn0015806.1 271 402 +
Chr1	stalkie_big_nohaplotig	CDS	12680547	12680673	.	-	1	Parent=FBgn0015806.1.mrna1;Target=FBgn0015806.1 144 270 +
Chr1	stalkie_big_nohaplotig	CDS	12684093	12684133	.	-	0	Parent=FBgn0015806.1.mrna1;Target=FBgn0015806.1 103 143 +
Chr1	stalkie_big_nohaplotig	CDS	12691424	12691525	.	-	0	Parent=FBgn0015806.1.mrna1;Target=FBgn0015806.1 1 102 +
Chr1	gffcl	locus	12678645	12678700	.	+	.	ID=RLOC_00005808;geneIDs=comp152602_c0_seq1.path1;transcripts=comp152602_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12678645	12678700	.	+	.	ID=comp152602_c0_seq1.mrna1;geneID=comp152602_c0_seq1.path1;Name=comp152602_c0_seq1;Dir=indeterminatecoverage=6.1;identity=96.4;matches=54;mismatches=2;indels=0;unknowns=0;Target=comp152602_c0_seq1 56 1 .;locus=RLOC_00005808
Chr1	stalkie_big_nohaplotig	exon	12678645	12678700	96	+	.	Parent=comp152602_c0_seq1.mrna1
Chr1	gffcl	locus	12692841	12693665	.	+	.	ID=RLOC_00005809;geneIDs=FBgn0052485.1.path1;transcripts=FBgn0052485.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12692841	12693665	.	+	.	ID=FBgn0052485.1.mrna1;geneID=FBgn0052485.1.path1;Name=FBgn0052485.1;Dir=sensecoverage=100.0;identity=99.6;matches=696;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005809
Chr1	stalkie_big_nohaplotig	exon	12692841	12693026	98	+	.	Parent=FBgn0052485.1.mrna1;Target=FBgn0052485.1 1 186 +
Chr1	stalkie_big_nohaplotig	exon	12693091	12693384	100	+	.	Parent=FBgn0052485.1.mrna1;Target=FBgn0052485.1 187 480 +
Chr1	stalkie_big_nohaplotig	exon	12693447	12693665	99	+	.	Parent=FBgn0052485.1.mrna1;Target=FBgn0052485.1 481 699 +
Chr1	stalkie_big_nohaplotig	CDS	12692841	12693026	.	+	0	Parent=FBgn0052485.1.mrna1;Target=FBgn0052485.1 1 186 +
Chr1	stalkie_big_nohaplotig	CDS	12693091	12693384	.	+	0	Parent=FBgn0052485.1.mrna1;Target=FBgn0052485.1 187 480 +
Chr1	stalkie_big_nohaplotig	CDS	12693447	12693665	.	+	0	Parent=FBgn0052485.1.mrna1;Target=FBgn0052485.1 481 699 +
Chr1	gffcl	locus	12695566	12703892	.	+	.	ID=RLOC_00005810;geneIDs=FBgn0040305.1.path1;transcripts=FBgn0040305.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12695566	12703892	.	+	.	ID=FBgn0040305.1.mrna1;geneID=FBgn0040305.1.path1;Name=FBgn0040305.1;Dir=sensecoverage=100.0;identity=99.9;matches=3094;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005810
Chr1	stalkie_big_nohaplotig	exon	12695566	12696392	100	+	.	Parent=FBgn0040305.1.mrna1;Target=FBgn0040305.1 1 827 +
Chr1	stalkie_big_nohaplotig	exon	12700307	12700424	100	+	.	Parent=FBgn0040305.1.mrna1;Target=FBgn0040305.1 828 945 +
Chr1	stalkie_big_nohaplotig	exon	12700852	12700954	100	+	.	Parent=FBgn0040305.1.mrna1;Target=FBgn0040305.1 946 1048 +
Chr1	stalkie_big_nohaplotig	exon	12701023	12701173	99	+	.	Parent=FBgn0040305.1.mrna1;Target=FBgn0040305.1 1049 1199 +
Chr1	stalkie_big_nohaplotig	exon	12701996	12703892	99	+	.	Parent=FBgn0040305.1.mrna1;Target=FBgn0040305.1 1200 3096 +
Chr1	stalkie_big_nohaplotig	CDS	12695566	12696392	.	+	0	Parent=FBgn0040305.1.mrna1;Target=FBgn0040305.1 1 827 +
Chr1	stalkie_big_nohaplotig	CDS	12700307	12700424	.	+	1	Parent=FBgn0040305.1.mrna1;Target=FBgn0040305.1 828 945 +
Chr1	stalkie_big_nohaplotig	CDS	12700852	12700954	.	+	0	Parent=FBgn0040305.1.mrna1;Target=FBgn0040305.1 946 1048 +
Chr1	stalkie_big_nohaplotig	CDS	12701023	12701173	.	+	2	Parent=FBgn0040305.1.mrna1;Target=FBgn0040305.1 1049 1199 +
Chr1	stalkie_big_nohaplotig	CDS	12701996	12703892	.	+	1	Parent=FBgn0040305.1.mrna1;Target=FBgn0040305.1 1200 3096 +
Chr1	gffcl	locus	12698773	12699772	.	-	.	ID=RLOC_00005811;geneIDs=comp154160_c1_seq1.path1;transcripts=comp154160_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12698773	12699772	.	-	.	ID=comp154160_c1_seq1.mrna1;geneID=comp154160_c1_seq1.path1;Name=comp154160_c1_seq1;Dir=indeterminatecoverage=97.3;identity=98.1;matches=982;mismatches=18;indels=1;unknowns=0;Target=comp154160_c1_seq1 1001 1 .;CDS_Target=comp154160_c1_seq1 510 376 .;locus=RLOC_00005811
Chr1	stalkie_big_nohaplotig	exon	12698773	12699772	98	-	.	Parent=comp154160_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12699263	12699397	.	-	0	Parent=comp154160_c1_seq1.mrna1
Chr1	gffcl	locus	12706508	12707627	.	+	.	ID=RLOC_00005812;geneIDs=FBgn0035631.1.path1;transcripts=FBgn0035631.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12706508	12707627	.	+	.	ID=FBgn0035631.1.mrna1;geneID=FBgn0035631.1.path1;Name=FBgn0035631.1;Dir=sensecoverage=100.0;identity=99.3;matches=882;mismatches=6;indels=0;unknowns=0;locus=RLOC_00005812
Chr1	stalkie_big_nohaplotig	exon	12706508	12706635	99	+	.	Parent=FBgn0035631.1.mrna1;Target=FBgn0035631.1 1 128 +
Chr1	stalkie_big_nohaplotig	exon	12706698	12706854	99	+	.	Parent=FBgn0035631.1.mrna1;Target=FBgn0035631.1 129 285 +
Chr1	stalkie_big_nohaplotig	exon	12706919	12707026	100	+	.	Parent=FBgn0035631.1.mrna1;Target=FBgn0035631.1 286 393 +
Chr1	stalkie_big_nohaplotig	exon	12707080	12707363	98	+	.	Parent=FBgn0035631.1.mrna1;Target=FBgn0035631.1 394 677 +
Chr1	stalkie_big_nohaplotig	exon	12707417	12707627	99	+	.	Parent=FBgn0035631.1.mrna1;Target=FBgn0035631.1 678 888 +
Chr1	stalkie_big_nohaplotig	CDS	12706508	12706635	.	+	0	Parent=FBgn0035631.1.mrna1;Target=FBgn0035631.1 1 128 +
Chr1	stalkie_big_nohaplotig	CDS	12706698	12706854	.	+	1	Parent=FBgn0035631.1.mrna1;Target=FBgn0035631.1 129 285 +
Chr1	stalkie_big_nohaplotig	CDS	12706919	12707026	.	+	0	Parent=FBgn0035631.1.mrna1;Target=FBgn0035631.1 286 393 +
Chr1	stalkie_big_nohaplotig	CDS	12707080	12707363	.	+	0	Parent=FBgn0035631.1.mrna1;Target=FBgn0035631.1 394 677 +
Chr1	stalkie_big_nohaplotig	CDS	12707417	12707627	.	+	1	Parent=FBgn0035631.1.mrna1;Target=FBgn0035631.1 678 888 +
Chr1	gffcl	locus	12707789	12709458	.	-	.	ID=RLOC_00005813;geneIDs=FBgn0035632.1.path1;transcripts=FBgn0035632.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12707789	12709458	.	-	.	ID=FBgn0035632.1.mrna1;geneID=FBgn0035632.1.path1;Name=FBgn0035632.1;Dir=sensecoverage=100.0;identity=99.8;matches=1536;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005813
Chr1	stalkie_big_nohaplotig	exon	12707789	12708439	100	-	.	Parent=FBgn0035632.1.mrna1;Target=FBgn0035632.1 889 1539 +
Chr1	stalkie_big_nohaplotig	exon	12708496	12708842	99	-	.	Parent=FBgn0035632.1.mrna1;Target=FBgn0035632.1 542 888 +
Chr1	stalkie_big_nohaplotig	exon	12708918	12709458	99	-	.	Parent=FBgn0035632.1.mrna1;Target=FBgn0035632.1 1 541 +
Chr1	stalkie_big_nohaplotig	CDS	12707789	12708439	.	-	0	Parent=FBgn0035632.1.mrna1;Target=FBgn0035632.1 889 1539 +
Chr1	stalkie_big_nohaplotig	CDS	12708496	12708842	.	-	2	Parent=FBgn0035632.1.mrna1;Target=FBgn0035632.1 542 888 +
Chr1	stalkie_big_nohaplotig	CDS	12708918	12709458	.	-	0	Parent=FBgn0035632.1.mrna1;Target=FBgn0035632.1 1 541 +
Chr1	gffcl	locus	12710229	12710965	.	+	.	ID=RLOC_00005815;geneIDs=FBgn0260856.1.path1;transcripts=FBgn0260856.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12710229	12710965	.	+	.	ID=FBgn0260856.1.mrna1;geneID=FBgn0260856.1.path1;Name=FBgn0260856.1;Dir=sensecoverage=100.0;identity=99.4;matches=659;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005815
Chr1	stalkie_big_nohaplotig	exon	12710229	12710377	98	+	.	Parent=FBgn0260856.1.mrna1;Target=FBgn0260856.1 1 149 +
Chr1	stalkie_big_nohaplotig	exon	12710452	12710965	99	+	.	Parent=FBgn0260856.1.mrna1;Target=FBgn0260856.1 150 663 +
Chr1	stalkie_big_nohaplotig	CDS	12710229	12710377	.	+	0	Parent=FBgn0260856.1.mrna1;Target=FBgn0260856.1 1 149 +
Chr1	stalkie_big_nohaplotig	CDS	12710452	12710965	.	+	1	Parent=FBgn0260856.1.mrna1;Target=FBgn0260856.1 150 663 +
Chr1	gffcl	locus	12711270	12712194	.	-	.	ID=RLOC_00005816;geneIDs=FBgn0035624.1.path1;transcripts=FBgn0035624.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12711270	12712194	.	-	.	ID=FBgn0035624.1.mrna1;geneID=FBgn0035624.1.path1;Name=FBgn0035624.1;Dir=sensecoverage=100.0;identity=99.7;matches=742;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005816
Chr1	stalkie_big_nohaplotig	exon	12711270	12711406	99	-	.	Parent=FBgn0035624.1.mrna1;Target=FBgn0035624.1 608 744 +
Chr1	stalkie_big_nohaplotig	exon	12711465	12711596	100	-	.	Parent=FBgn0035624.1.mrna1;Target=FBgn0035624.1 476 607 +
Chr1	stalkie_big_nohaplotig	exon	12711668	12711881	100	-	.	Parent=FBgn0035624.1.mrna1;Target=FBgn0035624.1 262 475 +
Chr1	stalkie_big_nohaplotig	exon	12711934	12712194	99	-	.	Parent=FBgn0035624.1.mrna1;Target=FBgn0035624.1 1 261 +
Chr1	stalkie_big_nohaplotig	CDS	12711270	12711406	.	-	2	Parent=FBgn0035624.1.mrna1;Target=FBgn0035624.1 608 744 +
Chr1	stalkie_big_nohaplotig	CDS	12711465	12711596	.	-	2	Parent=FBgn0035624.1.mrna1;Target=FBgn0035624.1 476 607 +
Chr1	stalkie_big_nohaplotig	CDS	12711668	12711881	.	-	0	Parent=FBgn0035624.1.mrna1;Target=FBgn0035624.1 262 475 +
Chr1	stalkie_big_nohaplotig	CDS	12711934	12712194	.	-	0	Parent=FBgn0035624.1.mrna1;Target=FBgn0035624.1 1 261 +
Chr1	gffcl	locus	12713251	12714314	.	+	.	ID=RLOC_00005817;geneIDs=FBgn0035876.1.path1;transcripts=FBgn0035876.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12713251	12714314	.	+	.	ID=FBgn0035876.1.mrna1;geneID=FBgn0035876.1.path1;Name=FBgn0035876.1;Dir=sensecoverage=100.0;identity=99.5;matches=860;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005817
Chr1	stalkie_big_nohaplotig	exon	12713251	12713310	100	+	.	Parent=FBgn0035876.1.mrna1;Target=FBgn0035876.1 1 60 +
Chr1	stalkie_big_nohaplotig	exon	12713374	12713451	98	+	.	Parent=FBgn0035876.1.mrna1;Target=FBgn0035876.1 61 138 +
Chr1	stalkie_big_nohaplotig	exon	12713527	12713961	100	+	.	Parent=FBgn0035876.1.mrna1;Target=FBgn0035876.1 139 573 +
Chr1	stalkie_big_nohaplotig	exon	12714024	12714314	98	+	.	Parent=FBgn0035876.1.mrna1;Target=FBgn0035876.1 574 864 +
Chr1	stalkie_big_nohaplotig	CDS	12713251	12713310	.	+	0	Parent=FBgn0035876.1.mrna1;Target=FBgn0035876.1 1 60 +
Chr1	stalkie_big_nohaplotig	CDS	12713374	12713451	.	+	0	Parent=FBgn0035876.1.mrna1;Target=FBgn0035876.1 61 138 +
Chr1	stalkie_big_nohaplotig	CDS	12713527	12713961	.	+	0	Parent=FBgn0035876.1.mrna1;Target=FBgn0035876.1 139 573 +
Chr1	stalkie_big_nohaplotig	CDS	12714024	12714314	.	+	0	Parent=FBgn0035876.1.mrna1;Target=FBgn0035876.1 574 864 +
Chr1	gffcl	locus	12715137	12719914	.	+	.	ID=RLOC_00005818;geneIDs=FBgn0011762.1.path1;transcripts=FBgn0011762.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12715137	12719914	.	+	.	ID=FBgn0011762.1.mrna1;geneID=FBgn0011762.1.path1;Name=FBgn0011762.1;Dir=sensecoverage=100.0;identity=99.5;matches=1364;mismatches=7;indels=0;unknowns=0;locus=RLOC_00005818
Chr1	stalkie_big_nohaplotig	exon	12715137	12715174	94	+	.	Parent=FBgn0011762.1.mrna1;Target=FBgn0011762.1 1 38 +
Chr1	stalkie_big_nohaplotig	exon	12718454	12718614	100	+	.	Parent=FBgn0011762.1.mrna1;Target=FBgn0011762.1 39 199 +
Chr1	stalkie_big_nohaplotig	exon	12718678	12718834	100	+	.	Parent=FBgn0011762.1.mrna1;Target=FBgn0011762.1 200 356 +
Chr1	stalkie_big_nohaplotig	exon	12718900	12719914	99	+	.	Parent=FBgn0011762.1.mrna1;Target=FBgn0011762.1 357 1371 +
Chr1	stalkie_big_nohaplotig	CDS	12715137	12715174	.	+	0	Parent=FBgn0011762.1.mrna1;Target=FBgn0011762.1 1 38 +
Chr1	stalkie_big_nohaplotig	CDS	12718454	12718614	.	+	1	Parent=FBgn0011762.1.mrna1;Target=FBgn0011762.1 39 199 +
Chr1	stalkie_big_nohaplotig	CDS	12718678	12718834	.	+	2	Parent=FBgn0011762.1.mrna1;Target=FBgn0011762.1 200 356 +
Chr1	stalkie_big_nohaplotig	CDS	12718900	12719914	.	+	1	Parent=FBgn0011762.1.mrna1;Target=FBgn0011762.1 357 1371 +
Chr1	gffcl	locus	12716659	12717975	.	+	.	ID=RLOC_00005819;geneIDs=FBgn0035877.1.path1;transcripts=FBgn0035877.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12716659	12717975	.	+	.	ID=FBgn0035877.1.mrna1;geneID=FBgn0035877.1.path1;Name=FBgn0035877.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1311;mismatches=6;indels=0;unknowns=0;Target=FBgn0035877.1 1317 1 .;locus=RLOC_00005819
Chr1	stalkie_big_nohaplotig	exon	12716659	12717975	99	+	.	Parent=FBgn0035877.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12716659	12717975	.	+	0	Parent=FBgn0035877.1.mrna1
Chr1	gffcl	locus	12722519	12727519	.	+	.	ID=RLOC_00005820;geneIDs=FBgn0035879.1.path1;transcripts=FBgn0035879.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12722519	12727519	.	+	.	ID=FBgn0035879.1.mrna1;geneID=FBgn0035879.1.path1;Name=FBgn0035879.1;Dir=sensecoverage=100.0;identity=99.8;matches=3572;mismatches=7;indels=0;unknowns=0;locus=RLOC_00005820
Chr1	stalkie_big_nohaplotig	exon	12722519	12722813	100	+	.	Parent=FBgn0035879.1.mrna1;Target=FBgn0035879.1 1 295 +
Chr1	stalkie_big_nohaplotig	exon	12723288	12723572	99	+	.	Parent=FBgn0035879.1.mrna1;Target=FBgn0035879.1 296 580 +
Chr1	stalkie_big_nohaplotig	exon	12723640	12723820	99	+	.	Parent=FBgn0035879.1.mrna1;Target=FBgn0035879.1 581 761 +
Chr1	stalkie_big_nohaplotig	exon	12723884	12724071	100	+	.	Parent=FBgn0035879.1.mrna1;Target=FBgn0035879.1 762 949 +
Chr1	stalkie_big_nohaplotig	exon	12724138	12725246	100	+	.	Parent=FBgn0035879.1.mrna1;Target=FBgn0035879.1 950 2058 +
Chr1	stalkie_big_nohaplotig	exon	12725310	12725394	100	+	.	Parent=FBgn0035879.1.mrna1;Target=FBgn0035879.1 2059 2143 +
Chr1	stalkie_big_nohaplotig	exon	12725469	12725572	100	+	.	Parent=FBgn0035879.1.mrna1;Target=FBgn0035879.1 2144 2247 +
Chr1	stalkie_big_nohaplotig	exon	12725638	12726357	99	+	.	Parent=FBgn0035879.1.mrna1;Target=FBgn0035879.1 2248 2967 +
Chr1	stalkie_big_nohaplotig	exon	12726423	12726869	100	+	.	Parent=FBgn0035879.1.mrna1;Target=FBgn0035879.1 2968 3414 +
Chr1	stalkie_big_nohaplotig	exon	12727355	12727519	100	+	.	Parent=FBgn0035879.1.mrna1;Target=FBgn0035879.1 3415 3579 +
Chr1	stalkie_big_nohaplotig	CDS	12722519	12722813	.	+	0	Parent=FBgn0035879.1.mrna1;Target=FBgn0035879.1 1 295 +
Chr1	stalkie_big_nohaplotig	CDS	12723288	12723572	.	+	2	Parent=FBgn0035879.1.mrna1;Target=FBgn0035879.1 296 580 +
Chr1	stalkie_big_nohaplotig	CDS	12723640	12723820	.	+	2	Parent=FBgn0035879.1.mrna1;Target=FBgn0035879.1 581 761 +
Chr1	stalkie_big_nohaplotig	CDS	12723884	12724071	.	+	1	Parent=FBgn0035879.1.mrna1;Target=FBgn0035879.1 762 949 +
Chr1	stalkie_big_nohaplotig	CDS	12724138	12725246	.	+	2	Parent=FBgn0035879.1.mrna1;Target=FBgn0035879.1 950 2058 +
Chr1	stalkie_big_nohaplotig	CDS	12725310	12725394	.	+	0	Parent=FBgn0035879.1.mrna1;Target=FBgn0035879.1 2059 2143 +
Chr1	stalkie_big_nohaplotig	CDS	12725469	12725572	.	+	2	Parent=FBgn0035879.1.mrna1;Target=FBgn0035879.1 2144 2247 +
Chr1	stalkie_big_nohaplotig	CDS	12725638	12726357	.	+	0	Parent=FBgn0035879.1.mrna1;Target=FBgn0035879.1 2248 2967 +
Chr1	stalkie_big_nohaplotig	CDS	12726423	12726869	.	+	0	Parent=FBgn0035879.1.mrna1;Target=FBgn0035879.1 2968 3414 +
Chr1	stalkie_big_nohaplotig	CDS	12727355	12727519	.	+	0	Parent=FBgn0035879.1.mrna1;Target=FBgn0035879.1 3415 3579 +
Chr1	gffcl	locus	12728630	12733999	.	-	.	ID=RLOC_00005821;geneIDs=FBgn0035880.1.path1,comp158157_c0_seq1.path1;transcripts=comp158157_c0_seq1.mrna1,FBgn0035880.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12728630	12733999	.	-	.	ID=comp158157_c0_seq1.mrna1;geneID=comp158157_c0_seq1.path1;Name=comp158157_c0_seq1;Dir=antisensecoverage=100.0;identity=99.0;matches=3286;mismatches=21;indels=12;unknowns=0;locus=RLOC_00005821
Chr1	stalkie_big_nohaplotig	exon	12728630	12729259	96	-	.	Parent=comp158157_c0_seq1.mrna1;Target=comp158157_c0_seq1 1 642 -
Chr1	stalkie_big_nohaplotig	exon	12729320	12729515	99	-	.	Parent=comp158157_c0_seq1.mrna1;Target=comp158157_c0_seq1 643 838 -
Chr1	stalkie_big_nohaplotig	exon	12729576	12729679	100	-	.	Parent=comp158157_c0_seq1.mrna1;Target=comp158157_c0_seq1 839 942 -
Chr1	stalkie_big_nohaplotig	exon	12729755	12729913	100	-	.	Parent=comp158157_c0_seq1.mrna1;Target=comp158157_c0_seq1 943 1101 -
Chr1	stalkie_big_nohaplotig	exon	12729999	12730337	100	-	.	Parent=comp158157_c0_seq1.mrna1;Target=comp158157_c0_seq1 1102 1440 -
Chr1	stalkie_big_nohaplotig	exon	12730408	12730761	99	-	.	Parent=comp158157_c0_seq1.mrna1;Target=comp158157_c0_seq1 1441 1794 -
Chr1	stalkie_big_nohaplotig	exon	12730860	12731228	99	-	.	Parent=comp158157_c0_seq1.mrna1;Target=comp158157_c0_seq1 1795 2163 -
Chr1	stalkie_big_nohaplotig	exon	12732707	12733096	99	-	.	Parent=comp158157_c0_seq1.mrna1;Target=comp158157_c0_seq1 2164 2553 -
Chr1	stalkie_big_nohaplotig	exon	12733149	12733518	99	-	.	Parent=comp158157_c0_seq1.mrna1;Target=comp158157_c0_seq1 2554 2923 -
Chr1	stalkie_big_nohaplotig	exon	12733604	12733999	99	-	.	Parent=comp158157_c0_seq1.mrna1;Target=comp158157_c0_seq1 2924 3319 -
Chr1	stalkie_big_nohaplotig	CDS	12729612	12729679	.	-	2	Parent=comp158157_c0_seq1.mrna1;Target=comp158157_c0_seq1 875 942 .
Chr1	stalkie_big_nohaplotig	CDS	12729755	12729913	.	-	2	Parent=comp158157_c0_seq1.mrna1;Target=comp158157_c0_seq1 943 1101 .
Chr1	stalkie_big_nohaplotig	CDS	12729999	12730337	.	-	2	Parent=comp158157_c0_seq1.mrna1;Target=comp158157_c0_seq1 1102 1440 .
Chr1	stalkie_big_nohaplotig	CDS	12730408	12730761	.	-	2	Parent=comp158157_c0_seq1.mrna1;Target=comp158157_c0_seq1 1441 1794 .
Chr1	stalkie_big_nohaplotig	CDS	12730860	12731228	.	-	2	Parent=comp158157_c0_seq1.mrna1;Target=comp158157_c0_seq1 1795 2163 .
Chr1	stalkie_big_nohaplotig	CDS	12732707	12733096	.	-	2	Parent=comp158157_c0_seq1.mrna1;Target=comp158157_c0_seq1 2164 2553 .
Chr1	stalkie_big_nohaplotig	CDS	12733149	12733518	.	-	0	Parent=comp158157_c0_seq1.mrna1;Target=comp158157_c0_seq1 2554 2923 .
Chr1	stalkie_big_nohaplotig	CDS	12733604	12733825	.	-	0	Parent=comp158157_c0_seq1.mrna1;Target=comp158157_c0_seq1 2924 3145 .
Chr1	stalkie_big_nohaplotig	mRNA	12728764	12733828	.	-	.	ID=FBgn0035880.1.mrna1;geneID=FBgn0035880.1.path1;Name=FBgn0035880.1;Dir=sensecoverage=100.0;identity=99.0;matches=2970;mismatches=18;indels=12;unknowns=0;locus=RLOC_00005821
Chr1	stalkie_big_nohaplotig	exon	12728764	12729259	96	-	.	Parent=FBgn0035880.1.mrna1;Target=FBgn0035880.1 2493 3000 +
Chr1	stalkie_big_nohaplotig	exon	12729320	12729515	99	-	.	Parent=FBgn0035880.1.mrna1;Target=FBgn0035880.1 2297 2492 +
Chr1	stalkie_big_nohaplotig	exon	12729576	12729679	100	-	.	Parent=FBgn0035880.1.mrna1;Target=FBgn0035880.1 2193 2296 +
Chr1	stalkie_big_nohaplotig	exon	12729755	12729899	100	-	.	Parent=FBgn0035880.1.mrna1;Target=FBgn0035880.1 2048 2192 +
Chr1	stalkie_big_nohaplotig	exon	12729999	12730337	100	-	.	Parent=FBgn0035880.1.mrna1;Target=FBgn0035880.1 1709 2047 +
Chr1	stalkie_big_nohaplotig	exon	12730408	12730761	99	-	.	Parent=FBgn0035880.1.mrna1;Target=FBgn0035880.1 1355 1708 +
Chr1	stalkie_big_nohaplotig	exon	12730860	12731228	99	-	.	Parent=FBgn0035880.1.mrna1;Target=FBgn0035880.1 986 1354 +
Chr1	stalkie_big_nohaplotig	exon	12732707	12733096	99	-	.	Parent=FBgn0035880.1.mrna1;Target=FBgn0035880.1 596 985 +
Chr1	stalkie_big_nohaplotig	exon	12733149	12733518	99	-	.	Parent=FBgn0035880.1.mrna1;Target=FBgn0035880.1 226 595 +
Chr1	stalkie_big_nohaplotig	exon	12733604	12733828	100	-	.	Parent=FBgn0035880.1.mrna1;Target=FBgn0035880.1 1 225 +
Chr1	stalkie_big_nohaplotig	CDS	12728764	12729259	.	-	1	Parent=FBgn0035880.1.mrna1;Target=FBgn0035880.1 2493 3000 +
Chr1	stalkie_big_nohaplotig	CDS	12729320	12729515	.	-	2	Parent=FBgn0035880.1.mrna1;Target=FBgn0035880.1 2297 2492 +
Chr1	stalkie_big_nohaplotig	CDS	12729576	12729679	.	-	1	Parent=FBgn0035880.1.mrna1;Target=FBgn0035880.1 2193 2296 +
Chr1	stalkie_big_nohaplotig	CDS	12729755	12729899	.	-	2	Parent=FBgn0035880.1.mrna1;Target=FBgn0035880.1 2048 2192 +
Chr1	stalkie_big_nohaplotig	CDS	12729999	12730337	.	-	2	Parent=FBgn0035880.1.mrna1;Target=FBgn0035880.1 1709 2047 +
Chr1	stalkie_big_nohaplotig	CDS	12730408	12730761	.	-	2	Parent=FBgn0035880.1.mrna1;Target=FBgn0035880.1 1355 1708 +
Chr1	stalkie_big_nohaplotig	CDS	12730860	12731228	.	-	2	Parent=FBgn0035880.1.mrna1;Target=FBgn0035880.1 986 1354 +
Chr1	stalkie_big_nohaplotig	CDS	12732707	12733096	.	-	2	Parent=FBgn0035880.1.mrna1;Target=FBgn0035880.1 596 985 +
Chr1	stalkie_big_nohaplotig	CDS	12733149	12733518	.	-	0	Parent=FBgn0035880.1.mrna1;Target=FBgn0035880.1 226 595 +
Chr1	stalkie_big_nohaplotig	CDS	12733604	12733828	.	-	0	Parent=FBgn0035880.1.mrna1;Target=FBgn0035880.1 1 225 +
Chr1	gffcl	locus	12736249	12741151	.	-	.	ID=RLOC_00005822;geneIDs=FBgn0001248.1.path1;transcripts=FBgn0001248.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12736249	12741151	.	-	.	ID=FBgn0001248.1.mrna1;geneID=FBgn0001248.1.path1;Name=FBgn0001248.1;Dir=sensecoverage=100.0;identity=99.9;matches=1382;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005822
Chr1	stalkie_big_nohaplotig	exon	12736249	12737478	99	-	.	Parent=FBgn0001248.1.mrna1;Target=FBgn0001248.1 154 1383 +
Chr1	stalkie_big_nohaplotig	exon	12740999	12741151	100	-	.	Parent=FBgn0001248.1.mrna1;Target=FBgn0001248.1 1 153 +
Chr1	stalkie_big_nohaplotig	CDS	12736249	12737478	.	-	0	Parent=FBgn0001248.1.mrna1;Target=FBgn0001248.1 154 1383 +
Chr1	stalkie_big_nohaplotig	CDS	12740999	12741151	.	-	0	Parent=FBgn0001248.1.mrna1;Target=FBgn0001248.1 1 153 +
Chr1	gffcl	locus	12747150	12747582	.	+	.	ID=RLOC_00005823;geneIDs=comp144209_c0_seq1.path1;transcripts=comp144209_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12747150	12747582	.	+	.	ID=comp144209_c0_seq1.mrna1;geneID=comp144209_c0_seq1.path1;Name=comp144209_c0_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=359;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005823
Chr1	stalkie_big_nohaplotig	exon	12747150	12747270	100	+	.	Parent=comp144209_c0_seq1.mrna1;Target=comp144209_c0_seq1 1 121 +
Chr1	stalkie_big_nohaplotig	exon	12747343	12747582	99	+	.	Parent=comp144209_c0_seq1.mrna1;Target=comp144209_c0_seq1 122 361 +
Chr1	stalkie_big_nohaplotig	CDS	12747152	12747270	.	+	0	Parent=comp144209_c0_seq1.mrna1;Target=comp144209_c0_seq1 3 121 +
Chr1	stalkie_big_nohaplotig	CDS	12747343	12747493	.	+	1	Parent=comp144209_c0_seq1.mrna1;Target=comp144209_c0_seq1 122 272 +
Chr1	gffcl	locus	12824654	12828214	.	+	.	ID=RLOC_00005825;geneIDs=FBgn0035888.1.path1;transcripts=FBgn0035888.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12824654	12828214	.	+	.	ID=FBgn0035888.1.mrna1;geneID=FBgn0035888.1.path1;Name=FBgn0035888.1;Dir=sensecoverage=100.0;identity=99.2;matches=2235;mismatches=9;indels=9;unknowns=0;locus=RLOC_00005825
Chr1	stalkie_big_nohaplotig	exon	12824654	12825354	98	+	.	Parent=FBgn0035888.1.mrna1;Target=FBgn0035888.1 1 692 +
Chr1	stalkie_big_nohaplotig	exon	12826590	12826899	99	+	.	Parent=FBgn0035888.1.mrna1;Target=FBgn0035888.1 693 1002 +
Chr1	stalkie_big_nohaplotig	exon	12826973	12828214	99	+	.	Parent=FBgn0035888.1.mrna1;Target=FBgn0035888.1 1003 2244 +
Chr1	stalkie_big_nohaplotig	CDS	12824654	12825354	.	+	0	Parent=FBgn0035888.1.mrna1;Target=FBgn0035888.1 1 692 +
Chr1	stalkie_big_nohaplotig	CDS	12826590	12826899	.	+	1	Parent=FBgn0035888.1.mrna1;Target=FBgn0035888.1 693 1002 +
Chr1	stalkie_big_nohaplotig	CDS	12826973	12828214	.	+	0	Parent=FBgn0035888.1.mrna1;Target=FBgn0035888.1 1003 2244 +
Chr1	gffcl	locus	12829788	12831830	.	-	.	ID=RLOC_00005826;geneIDs=FBgn0035889.1.path1;transcripts=FBgn0035889.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12829788	12831830	.	-	.	ID=FBgn0035889.1.mrna1;geneID=FBgn0035889.1.path1;Name=FBgn0035889.1;Dir=sensecoverage=100.0;identity=98.7;matches=1886;mismatches=14;indels=10;unknowns=0;locus=RLOC_00005826
Chr1	stalkie_big_nohaplotig	exon	12829788	12830534	99	-	.	Parent=FBgn0035889.1.mrna1;Target=FBgn0035889.1 1159 1905 +
Chr1	stalkie_big_nohaplotig	exon	12830619	12831313	97	-	.	Parent=FBgn0035889.1.mrna1;Target=FBgn0035889.1 464 1158 +
Chr1	stalkie_big_nohaplotig	exon	12831368	12831830	99	-	.	Parent=FBgn0035889.1.mrna1;Target=FBgn0035889.1 1 463 +
Chr1	stalkie_big_nohaplotig	CDS	12829788	12830534	.	-	0	Parent=FBgn0035889.1.mrna1;Target=FBgn0035889.1 1159 1905 +
Chr1	stalkie_big_nohaplotig	CDS	12830619	12831313	.	-	2	Parent=FBgn0035889.1.mrna1;Target=FBgn0035889.1 464 1158 +
Chr1	stalkie_big_nohaplotig	CDS	12831368	12831830	.	-	0	Parent=FBgn0035889.1.mrna1;Target=FBgn0035889.1 1 463 +
Chr1	gffcl	locus	12833572	12834480	.	-	.	ID=RLOC_00005827;geneIDs=ORF2207.path1;transcripts=ORF2207.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12833572	12834480	.	-	.	ID=ORF2207.mrna1;geneID=ORF2207.path1;Name=ORF2207;Dir=indeterminatecoverage=100.0;identity=98.1;matches=892;mismatches=5;indels=12;unknowns=0;Target=ORF2207 897 1 .;locus=RLOC_00005827
Chr1	stalkie_big_nohaplotig	exon	12833572	12834480	98	-	.	Parent=ORF2207.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12833572	12834480	.	-	0	Parent=ORF2207.mrna1
Chr1	gffcl	locus	12835116	12838735	.	+	.	ID=RLOC_00005828;geneIDs=comp148437_c0_seq1.path1;transcripts=comp148437_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12835116	12838735	.	+	.	ID=comp148437_c0_seq1.mrna1;geneID=comp148437_c0_seq1.path1;Name=comp148437_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=812;mismatches=9;indels=0;unknowns=0;Target=comp148437_c0_seq1 129 677 .;locus=RLOC_00005828
Chr1	stalkie_big_nohaplotig	exon	12835116	12835155	97	+	.	Parent=comp148437_c0_seq1.mrna1;Target=comp148437_c0_seq1 782 821 -
Chr1	stalkie_big_nohaplotig	exon	12837955	12838735	98	+	.	Parent=comp148437_c0_seq1.mrna1;Target=comp148437_c0_seq1 1 781 -
Chr1	stalkie_big_nohaplotig	CDS	12838059	12838607	.	+	0	Parent=comp148437_c0_seq1.mrna1
Chr1	gffcl	locus	12841109	12849024	.	+	.	ID=RLOC_00005829;geneIDs=FBgn0037065.1.path1;transcripts=FBgn0037065.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12841109	12849024	.	+	.	ID=FBgn0037065.1.mrna1;geneID=FBgn0037065.1.path1;Name=FBgn0037065.1;Dir=sensecoverage=100.0;identity=99.4;matches=1121;mismatches=7;indels=0;unknowns=0;locus=RLOC_00005829
Chr1	stalkie_big_nohaplotig	exon	12841109	12841231	99	+	.	Parent=FBgn0037065.1.mrna1;Target=FBgn0037065.1 1 123 +
Chr1	stalkie_big_nohaplotig	exon	12846647	12846935	99	+	.	Parent=FBgn0037065.1.mrna1;Target=FBgn0037065.1 124 412 +
Chr1	stalkie_big_nohaplotig	exon	12847002	12847142	100	+	.	Parent=FBgn0037065.1.mrna1;Target=FBgn0037065.1 413 553 +
Chr1	stalkie_big_nohaplotig	exon	12847247	12847437	100	+	.	Parent=FBgn0037065.1.mrna1;Target=FBgn0037065.1 554 744 +
Chr1	stalkie_big_nohaplotig	exon	12847827	12847909	98	+	.	Parent=FBgn0037065.1.mrna1;Target=FBgn0037065.1 745 827 +
Chr1	stalkie_big_nohaplotig	exon	12848724	12849024	98	+	.	Parent=FBgn0037065.1.mrna1;Target=FBgn0037065.1 828 1128 +
Chr1	stalkie_big_nohaplotig	CDS	12841109	12841231	.	+	0	Parent=FBgn0037065.1.mrna1;Target=FBgn0037065.1 1 123 +
Chr1	stalkie_big_nohaplotig	CDS	12846647	12846935	.	+	0	Parent=FBgn0037065.1.mrna1;Target=FBgn0037065.1 124 412 +
Chr1	stalkie_big_nohaplotig	CDS	12847002	12847142	.	+	2	Parent=FBgn0037065.1.mrna1;Target=FBgn0037065.1 413 553 +
Chr1	stalkie_big_nohaplotig	CDS	12847247	12847437	.	+	2	Parent=FBgn0037065.1.mrna1;Target=FBgn0037065.1 554 744 +
Chr1	stalkie_big_nohaplotig	CDS	12847827	12847909	.	+	0	Parent=FBgn0037065.1.mrna1;Target=FBgn0037065.1 745 827 +
Chr1	stalkie_big_nohaplotig	CDS	12848724	12849024	.	+	1	Parent=FBgn0037065.1.mrna1;Target=FBgn0037065.1 828 1128 +
Chr1	gffcl	locus	12852494	12853208	.	+	.	ID=RLOC_00005830;geneIDs=FBgn0027945.1.path1;transcripts=FBgn0027945.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12852494	12853208	.	+	.	ID=FBgn0027945.1.mrna1;geneID=FBgn0027945.1.path1;Name=FBgn0027945.1;Dir=sensecoverage=100.0;identity=99.8;matches=479;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005830
Chr1	stalkie_big_nohaplotig	exon	12852494	12852605	100	+	.	Parent=FBgn0027945.1.mrna1;Target=FBgn0027945.1 1 112 +
Chr1	stalkie_big_nohaplotig	exon	12852778	12853053	99	+	.	Parent=FBgn0027945.1.mrna1;Target=FBgn0027945.1 113 388 +
Chr1	stalkie_big_nohaplotig	exon	12853117	12853208	100	+	.	Parent=FBgn0027945.1.mrna1;Target=FBgn0027945.1 389 480 +
Chr1	stalkie_big_nohaplotig	CDS	12852494	12852605	.	+	0	Parent=FBgn0027945.1.mrna1;Target=FBgn0027945.1 1 112 +
Chr1	stalkie_big_nohaplotig	CDS	12852778	12853053	.	+	2	Parent=FBgn0027945.1.mrna1;Target=FBgn0027945.1 113 388 +
Chr1	stalkie_big_nohaplotig	CDS	12853117	12853208	.	+	2	Parent=FBgn0027945.1.mrna1;Target=FBgn0027945.1 389 480 +
Chr1	gffcl	locus	12859270	12873796	.	+	.	ID=RLOC_00005831;geneIDs=FBgn0012034.2.path1;transcripts=FBgn0012034.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12859270	12873796	.	+	.	ID=FBgn0012034.2.mrna1;geneID=FBgn0012034.2.path1;Name=FBgn0012034.2;Dir=sensecoverage=100.0;identity=99.7;matches=2020;mismatches=7;indels=0;unknowns=0;locus=RLOC_00005831
Chr1	stalkie_big_nohaplotig	exon	12859270	12859598	100	+	.	Parent=FBgn0012034.2.mrna1;Target=FBgn0012034.2 1 329 +
Chr1	stalkie_big_nohaplotig	exon	12871846	12872584	99	+	.	Parent=FBgn0012034.2.mrna1;Target=FBgn0012034.2 330 1068 +
Chr1	stalkie_big_nohaplotig	exon	12872647	12872801	99	+	.	Parent=FBgn0012034.2.mrna1;Target=FBgn0012034.2 1069 1223 +
Chr1	stalkie_big_nohaplotig	exon	12872866	12873034	99	+	.	Parent=FBgn0012034.2.mrna1;Target=FBgn0012034.2 1224 1392 +
Chr1	stalkie_big_nohaplotig	exon	12873094	12873283	100	+	.	Parent=FBgn0012034.2.mrna1;Target=FBgn0012034.2 1393 1582 +
Chr1	stalkie_big_nohaplotig	exon	12873352	12873796	99	+	.	Parent=FBgn0012034.2.mrna1;Target=FBgn0012034.2 1583 2027 +
Chr1	stalkie_big_nohaplotig	CDS	12859270	12859598	.	+	0	Parent=FBgn0012034.2.mrna1;Target=FBgn0012034.2 1 329 +
Chr1	stalkie_big_nohaplotig	CDS	12871846	12872584	.	+	1	Parent=FBgn0012034.2.mrna1;Target=FBgn0012034.2 330 1068 +
Chr1	stalkie_big_nohaplotig	CDS	12872647	12872801	.	+	0	Parent=FBgn0012034.2.mrna1;Target=FBgn0012034.2 1069 1223 +
Chr1	stalkie_big_nohaplotig	CDS	12872866	12873034	.	+	1	Parent=FBgn0012034.2.mrna1;Target=FBgn0012034.2 1224 1392 +
Chr1	stalkie_big_nohaplotig	CDS	12873094	12873283	.	+	0	Parent=FBgn0012034.2.mrna1;Target=FBgn0012034.2 1393 1582 +
Chr1	stalkie_big_nohaplotig	CDS	12873352	12873794	.	+	2	Parent=FBgn0012034.2.mrna1;Target=FBgn0012034.2 1583 2025 +
Chr1	gffcl	locus	12878751	12879784	.	+	.	ID=RLOC_00005832;geneIDs=FBgn0037063.1.path1;transcripts=FBgn0037063.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12878751	12879784	.	+	.	ID=FBgn0037063.1.mrna1;geneID=FBgn0037063.1.path1;Name=FBgn0037063.1;Dir=sensecoverage=100.0;identity=99.5;matches=845;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005832
Chr1	stalkie_big_nohaplotig	exon	12878751	12878834	98	+	.	Parent=FBgn0037063.1.mrna1;Target=FBgn0037063.1 1 84 +
Chr1	stalkie_big_nohaplotig	exon	12878906	12879039	100	+	.	Parent=FBgn0037063.1.mrna1;Target=FBgn0037063.1 85 218 +
Chr1	stalkie_big_nohaplotig	exon	12879095	12879463	100	+	.	Parent=FBgn0037063.1.mrna1;Target=FBgn0037063.1 219 587 +
Chr1	stalkie_big_nohaplotig	exon	12879523	12879784	98	+	.	Parent=FBgn0037063.1.mrna1;Target=FBgn0037063.1 588 849 +
Chr1	stalkie_big_nohaplotig	CDS	12878751	12878834	.	+	0	Parent=FBgn0037063.1.mrna1;Target=FBgn0037063.1 1 84 +
Chr1	stalkie_big_nohaplotig	CDS	12878906	12879039	.	+	0	Parent=FBgn0037063.1.mrna1;Target=FBgn0037063.1 85 218 +
Chr1	stalkie_big_nohaplotig	CDS	12879095	12879463	.	+	1	Parent=FBgn0037063.1.mrna1;Target=FBgn0037063.1 219 587 +
Chr1	stalkie_big_nohaplotig	CDS	12879523	12879784	.	+	1	Parent=FBgn0037063.1.mrna1;Target=FBgn0037063.1 588 849 +
Chr1	gffcl	locus	12883705	12925983	.	+	.	ID=RLOC_00005833;geneIDs=comp162508_c0_seq1.path1;transcripts=comp162508_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12883705	12925983	.	+	.	ID=comp162508_c0_seq1.mrna1;geneID=comp162508_c0_seq1.path1;Name=comp162508_c0_seq1;Dir=indeterminatecoverage=94.3;identity=96.4;matches=1364;mismatches=41;indels=10;unknowns=0;Target=comp162508_c0_seq1 635 480 .;locus=RLOC_00005833
Chr1	stalkie_big_nohaplotig	exon	12883705	12885034	97	+	.	Parent=comp162508_c0_seq1.mrna1;Target=comp162508_c0_seq1 1335 1 .
Chr1	stalkie_big_nohaplotig	exon	12887289	12887291	100	+	.	Parent=comp162508_c0_seq1.mrna1;Target=comp162508_c0_seq1 1338 1336 .
Chr1	stalkie_big_nohaplotig	exon	12894602	12894606	100	+	.	Parent=comp162508_c0_seq1.mrna1;Target=comp162508_c0_seq1 1343 1339 .
Chr1	stalkie_big_nohaplotig	exon	12897134	12897138	100	+	.	Parent=comp162508_c0_seq1.mrna1;Target=comp162508_c0_seq1 1348 1344 .
Chr1	stalkie_big_nohaplotig	exon	12908206	12908250	48	+	.	Parent=comp162508_c0_seq1.mrna1;Target=comp162508_c0_seq1 1388 1349 .
Chr1	stalkie_big_nohaplotig	exon	12909521	12909528	100	+	.	Parent=comp162508_c0_seq1.mrna1;Target=comp162508_c0_seq1 1396 1389 .
Chr1	stalkie_big_nohaplotig	exon	12917206	12917210	100	+	.	Parent=comp162508_c0_seq1.mrna1;Target=comp162508_c0_seq1 1401 1397 .
Chr1	stalkie_big_nohaplotig	exon	12922007	12922010	100	+	.	Parent=comp162508_c0_seq1.mrna1;Target=comp162508_c0_seq1 1405 1402 .
Chr1	stalkie_big_nohaplotig	exon	12925979	12925983	100	+	.	Parent=comp162508_c0_seq1.mrna1;Target=comp162508_c0_seq1 1410 1406 .
Chr1	stalkie_big_nohaplotig	CDS	12884184	12884339	.	+	0	Parent=comp162508_c0_seq1.mrna1
Chr1	gffcl	locus	12923171	12923483	.	+	.	ID=RLOC_00005834;geneIDs=comp118754_c0_seq1.path1;transcripts=comp118754_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12923171	12923483	.	+	.	ID=comp118754_c0_seq1.mrna1;geneID=comp118754_c0_seq1.path1;Name=comp118754_c0_seq1;Dir=indeterminatecoverage=86.5;identity=99.7;matches=312;mismatches=1;indels=0;unknowns=0;Target=comp118754_c0_seq1 315 3 .;CDS_Target=comp118754_c0_seq1 173 147 .;locus=RLOC_00005834
Chr1	stalkie_big_nohaplotig	exon	12923171	12923483	99	+	.	Parent=comp118754_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12923315	12923341	.	+	0	Parent=comp118754_c0_seq1.mrna1
Chr1	gffcl	locus	12976472	12978614	.	-	.	ID=RLOC_00005835;geneIDs=FBgn0028427.1.path1;transcripts=FBgn0028427.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12976472	12978614	.	-	.	ID=FBgn0028427.1.mrna1;geneID=FBgn0028427.1.path1;Name=FBgn0028427.1;Dir=sensecoverage=100.0;identity=99.3;matches=1370;mismatches=10;indels=0;unknowns=0;locus=RLOC_00005835
Chr1	stalkie_big_nohaplotig	exon	12976472	12977014	99	-	.	Parent=FBgn0028427.1.mrna1;Target=FBgn0028427.1 838 1380 +
Chr1	stalkie_big_nohaplotig	exon	12977378	12977521	100	-	.	Parent=FBgn0028427.1.mrna1;Target=FBgn0028427.1 694 837 +
Chr1	stalkie_big_nohaplotig	exon	12977584	12977985	99	-	.	Parent=FBgn0028427.1.mrna1;Target=FBgn0028427.1 292 693 +
Chr1	stalkie_big_nohaplotig	exon	12978047	12978212	100	-	.	Parent=FBgn0028427.1.mrna1;Target=FBgn0028427.1 126 291 +
Chr1	stalkie_big_nohaplotig	exon	12978490	12978614	96	-	.	Parent=FBgn0028427.1.mrna1;Target=FBgn0028427.1 1 125 +
Chr1	stalkie_big_nohaplotig	CDS	12976472	12977014	.	-	0	Parent=FBgn0028427.1.mrna1;Target=FBgn0028427.1 838 1380 +
Chr1	stalkie_big_nohaplotig	CDS	12977378	12977521	.	-	0	Parent=FBgn0028427.1.mrna1;Target=FBgn0028427.1 694 837 +
Chr1	stalkie_big_nohaplotig	CDS	12977584	12977985	.	-	0	Parent=FBgn0028427.1.mrna1;Target=FBgn0028427.1 292 693 +
Chr1	stalkie_big_nohaplotig	CDS	12978047	12978212	.	-	1	Parent=FBgn0028427.1.mrna1;Target=FBgn0028427.1 126 291 +
Chr1	stalkie_big_nohaplotig	CDS	12978490	12978614	.	-	0	Parent=FBgn0028427.1.mrna1;Target=FBgn0028427.1 1 125 +
Chr1	gffcl	locus	12979659	12980243	.	+	.	ID=RLOC_00005836;geneIDs=FBgn0037061.1.path1;transcripts=FBgn0037061.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12979659	12980243	.	+	.	ID=FBgn0037061.1.mrna1;geneID=FBgn0037061.1.path1;Name=FBgn0037061.1;Dir=sensecoverage=100.0;identity=98.9;matches=433;mismatches=4;indels=1;unknowns=0;Target=FBgn0037061.1 3 56 +;locus=RLOC_00005836
Chr1	stalkie_big_nohaplotig	exon	12979659	12979801	99	+	.	Parent=FBgn0037061.1.mrna1;Target=FBgn0037061.1 1 144 +
Chr1	stalkie_big_nohaplotig	exon	12979875	12979976	99	+	.	Parent=FBgn0037061.1.mrna1;Target=FBgn0037061.1 145 246 +
Chr1	stalkie_big_nohaplotig	exon	12980052	12980243	98	+	.	Parent=FBgn0037061.1.mrna1;Target=FBgn0037061.1 247 438 +
Chr1	stalkie_big_nohaplotig	CDS	12979661	12979713	.	+	0	Parent=FBgn0037061.1.mrna1
Chr1	gffcl	locus	12980942	12988690	.	-	.	ID=RLOC_00005837;geneIDs=FBgn0037060.1.path1;transcripts=FBgn0037060.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12980942	12988690	.	-	.	ID=FBgn0037060.1.mrna1;geneID=FBgn0037060.1.path1;Name=FBgn0037060.1;Dir=sensecoverage=100.0;identity=99.8;matches=1764;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005837
Chr1	stalkie_big_nohaplotig	exon	12980942	12981158	100	-	.	Parent=FBgn0037060.1.mrna1;Target=FBgn0037060.1 1551 1767 +
Chr1	stalkie_big_nohaplotig	exon	12981215	12981349	100	-	.	Parent=FBgn0037060.1.mrna1;Target=FBgn0037060.1 1416 1550 +
Chr1	stalkie_big_nohaplotig	exon	12984352	12984503	100	-	.	Parent=FBgn0037060.1.mrna1;Target=FBgn0037060.1 1264 1415 +
Chr1	stalkie_big_nohaplotig	exon	12984561	12984628	100	-	.	Parent=FBgn0037060.1.mrna1;Target=FBgn0037060.1 1196 1263 +
Chr1	stalkie_big_nohaplotig	exon	12986005	12986249	100	-	.	Parent=FBgn0037060.1.mrna1;Target=FBgn0037060.1 951 1195 +
Chr1	stalkie_big_nohaplotig	exon	12986319	12986717	99	-	.	Parent=FBgn0037060.1.mrna1;Target=FBgn0037060.1 552 950 +
Chr1	stalkie_big_nohaplotig	exon	12986884	12987071	100	-	.	Parent=FBgn0037060.1.mrna1;Target=FBgn0037060.1 364 551 +
Chr1	stalkie_big_nohaplotig	exon	12987560	12987697	100	-	.	Parent=FBgn0037060.1.mrna1;Target=FBgn0037060.1 226 363 +
Chr1	stalkie_big_nohaplotig	exon	12987776	12987881	100	-	.	Parent=FBgn0037060.1.mrna1;Target=FBgn0037060.1 120 225 +
Chr1	stalkie_big_nohaplotig	exon	12988572	12988690	100	-	.	Parent=FBgn0037060.1.mrna1;Target=FBgn0037060.1 1 119 +
Chr1	stalkie_big_nohaplotig	CDS	12980942	12981158	.	-	1	Parent=FBgn0037060.1.mrna1;Target=FBgn0037060.1 1551 1767 +
Chr1	stalkie_big_nohaplotig	CDS	12981215	12981349	.	-	1	Parent=FBgn0037060.1.mrna1;Target=FBgn0037060.1 1416 1550 +
Chr1	stalkie_big_nohaplotig	CDS	12984352	12984503	.	-	0	Parent=FBgn0037060.1.mrna1;Target=FBgn0037060.1 1264 1415 +
Chr1	stalkie_big_nohaplotig	CDS	12984561	12984628	.	-	2	Parent=FBgn0037060.1.mrna1;Target=FBgn0037060.1 1196 1263 +
Chr1	stalkie_big_nohaplotig	CDS	12986005	12986249	.	-	1	Parent=FBgn0037060.1.mrna1;Target=FBgn0037060.1 951 1195 +
Chr1	stalkie_big_nohaplotig	CDS	12986319	12986717	.	-	1	Parent=FBgn0037060.1.mrna1;Target=FBgn0037060.1 552 950 +
Chr1	stalkie_big_nohaplotig	CDS	12986884	12987071	.	-	0	Parent=FBgn0037060.1.mrna1;Target=FBgn0037060.1 364 551 +
Chr1	stalkie_big_nohaplotig	CDS	12987560	12987697	.	-	0	Parent=FBgn0037060.1.mrna1;Target=FBgn0037060.1 226 363 +
Chr1	stalkie_big_nohaplotig	CDS	12987776	12987881	.	-	1	Parent=FBgn0037060.1.mrna1;Target=FBgn0037060.1 120 225 +
Chr1	stalkie_big_nohaplotig	CDS	12988572	12988690	.	-	0	Parent=FBgn0037060.1.mrna1;Target=FBgn0037060.1 1 119 +
Chr1	gffcl	locus	12981772	12983034	.	+	.	ID=RLOC_00005838;geneIDs=comp158005_c0_seq1.path1;transcripts=comp158005_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12981772	12983034	.	+	.	ID=comp158005_c0_seq1.mrna1;geneID=comp158005_c0_seq1.path1;Name=comp158005_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=1080;mismatches=26;indels=2;unknowns=0;Target=comp158005_c0_seq1 221 165 .;locus=RLOC_00005838
Chr1	stalkie_big_nohaplotig	exon	12981772	12982644	97	+	.	Parent=comp158005_c0_seq1.mrna1;Target=comp158005_c0_seq1 875 1 .
Chr1	stalkie_big_nohaplotig	exon	12982802	12983034	97	+	.	Parent=comp158005_c0_seq1.mrna1;Target=comp158005_c0_seq1 1108 876 .
Chr1	stalkie_big_nohaplotig	CDS	12981936	12981990	.	+	0	Parent=comp158005_c0_seq1.mrna1
Chr1	gffcl	locus	12983239	12983975	.	+	.	ID=RLOC_00005839;geneIDs=comp150890_c0_seq1.path1;transcripts=comp150890_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12983239	12983975	.	+	.	ID=comp150890_c0_seq1.mrna1;geneID=comp150890_c0_seq1.path1;Name=comp150890_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=735;mismatches=2;indels=0;unknowns=0;Target=comp150890_c0_seq1 737 1 .;CDS_Target=comp150890_c0_seq1 348 229 .;locus=RLOC_00005839
Chr1	stalkie_big_nohaplotig	exon	12983239	12983975	99	+	.	Parent=comp150890_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12983467	12983586	.	+	0	Parent=comp150890_c0_seq1.mrna1
Chr1	gffcl	locus	12985741	12985922	.	+	.	ID=RLOC_00005840;geneIDs=comp116047_c0_seq1.path1;transcripts=comp116047_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12985741	12985922	.	+	.	ID=comp116047_c0_seq1.mrna1;geneID=comp116047_c0_seq1.path1;Name=comp116047_c0_seq1;Dir=indeterminatecoverage=35.8;identity=100.0;matches=182;mismatches=0;indels=0;unknowns=0;Target=comp116047_c0_seq1 182 1 .;CDS_Target=comp116047_c0_seq1 180 1 .;locus=RLOC_00005840
Chr1	stalkie_big_nohaplotig	exon	12985741	12985922	100	+	.	Parent=comp116047_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12985741	12985920	.	+	0	Parent=comp116047_c0_seq1.mrna1
Chr1	gffcl	locus	12989663	12990627	.	+	.	ID=RLOC_00005841;geneIDs=comp156276_c0_seq1.path1;transcripts=comp156276_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12989663	12990627	.	+	.	ID=comp156276_c0_seq1.mrna1;geneID=comp156276_c0_seq1.path1;Name=comp156276_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=942;mismatches=23;indels=2;unknowns=0;Target=comp156276_c0_seq1 967 1 .;CDS_Target=comp156276_c0_seq1 231 157 .;locus=RLOC_00005841
Chr1	stalkie_big_nohaplotig	exon	12989663	12990627	97	+	.	Parent=comp156276_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	12989819	12989893	.	+	0	Parent=comp156276_c0_seq1.mrna1
Chr1	gffcl	locus	12990705	12992059	.	-	.	ID=RLOC_00005842;geneIDs=FBgn0037057.1.path1;transcripts=FBgn0037057.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12990705	12992059	.	-	.	ID=FBgn0037057.1.mrna1;geneID=FBgn0037057.1.path1;Name=FBgn0037057.1;Dir=sensecoverage=100.0;identity=99.9;matches=1232;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005842
Chr1	stalkie_big_nohaplotig	exon	12990705	12990860	99	-	.	Parent=FBgn0037057.1.mrna1;Target=FBgn0037057.1 1078 1233 +
Chr1	stalkie_big_nohaplotig	exon	12990924	12991885	100	-	.	Parent=FBgn0037057.1.mrna1;Target=FBgn0037057.1 116 1077 +
Chr1	stalkie_big_nohaplotig	exon	12991945	12992059	100	-	.	Parent=FBgn0037057.1.mrna1;Target=FBgn0037057.1 1 115 +
Chr1	stalkie_big_nohaplotig	CDS	12990705	12990860	.	-	0	Parent=FBgn0037057.1.mrna1;Target=FBgn0037057.1 1078 1233 +
Chr1	stalkie_big_nohaplotig	CDS	12990924	12991885	.	-	2	Parent=FBgn0037057.1.mrna1;Target=FBgn0037057.1 116 1077 +
Chr1	stalkie_big_nohaplotig	CDS	12991945	12992059	.	-	0	Parent=FBgn0037057.1.mrna1;Target=FBgn0037057.1 1 115 +
Chr1	gffcl	locus	12992915	12994325	.	-	.	ID=RLOC_00005843;geneIDs=FBgn0037057.3.path1;transcripts=FBgn0037057.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12992915	12994325	.	-	.	ID=FBgn0037057.3.mrna1;geneID=FBgn0037057.3.path1;Name=FBgn0037057.3;Dir=sensecoverage=100.0;identity=100.0;matches=1275;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005843
Chr1	stalkie_big_nohaplotig	exon	12992915	12993073	100	-	.	Parent=FBgn0037057.3.mrna1;Target=FBgn0037057.3 1117 1275 +
Chr1	stalkie_big_nohaplotig	exon	12993134	12994116	100	-	.	Parent=FBgn0037057.3.mrna1;Target=FBgn0037057.3 134 1116 +
Chr1	stalkie_big_nohaplotig	exon	12994193	12994325	100	-	.	Parent=FBgn0037057.3.mrna1;Target=FBgn0037057.3 1 133 +
Chr1	stalkie_big_nohaplotig	CDS	12992915	12993073	.	-	0	Parent=FBgn0037057.3.mrna1;Target=FBgn0037057.3 1117 1275 +
Chr1	stalkie_big_nohaplotig	CDS	12993134	12994116	.	-	2	Parent=FBgn0037057.3.mrna1;Target=FBgn0037057.3 134 1116 +
Chr1	stalkie_big_nohaplotig	CDS	12994193	12994325	.	-	0	Parent=FBgn0037057.3.mrna1;Target=FBgn0037057.3 1 133 +
Chr1	gffcl	locus	12996211	13018646	.	-	.	ID=RLOC_00005844;geneIDs=FBgn0037057.2.path1;transcripts=FBgn0037057.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	12996211	13018646	.	-	.	ID=FBgn0037057.2.mrna1;geneID=FBgn0037057.2.path1;Name=FBgn0037057.2;Dir=sensecoverage=98.6;identity=99.8;matches=1420;mismatches=2;indels=1;unknowns=0;locus=RLOC_00005844
Chr1	stalkie_big_nohaplotig	exon	12996211	12996366	100	-	.	Parent=FBgn0037057.2.mrna1;Target=FBgn0037057.2 1288 1443 +
Chr1	stalkie_big_nohaplotig	exon	12997881	12998630	99	-	.	Parent=FBgn0037057.2.mrna1;Target=FBgn0037057.2 538 1287 +
Chr1	stalkie_big_nohaplotig	exon	13007705	13007910	100	-	.	Parent=FBgn0037057.2.mrna1;Target=FBgn0037057.2 332 537 +
Chr1	stalkie_big_nohaplotig	exon	13018158	13018422	100	-	.	Parent=FBgn0037057.2.mrna1;Target=FBgn0037057.2 67 331 +
Chr1	stalkie_big_nohaplotig	exon	13018602	13018646	97	-	.	Parent=FBgn0037057.2.mrna1;Target=FBgn0037057.2 21 66 +
Chr1	stalkie_big_nohaplotig	CDS	12996211	12996366	.	-	0	Parent=FBgn0037057.2.mrna1;Target=FBgn0037057.2 1288 1443 +
Chr1	stalkie_big_nohaplotig	CDS	12997881	12998630	.	-	0	Parent=FBgn0037057.2.mrna1;Target=FBgn0037057.2 538 1287 +
Chr1	stalkie_big_nohaplotig	CDS	13007705	13007910	.	-	2	Parent=FBgn0037057.2.mrna1;Target=FBgn0037057.2 332 537 +
Chr1	stalkie_big_nohaplotig	CDS	13018158	13018323	.	-	0	Parent=FBgn0037057.2.mrna1;Target=FBgn0037057.2 166 331 +
Chr1	gffcl	locus	13003045	13004177	.	-	.	ID=RLOC_00005845;geneIDs=comp163325_c0_seq1.path5;transcripts=comp163325_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	13003045	13004177	.	-	.	ID=comp163325_c0_seq1.mrna5;geneID=comp163325_c0_seq1.path5;Name=comp163325_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1130;mismatches=3;indels=0;unknowns=0;Target=comp163325_c0_seq1 1133 1 .;CDS_Target=comp163325_c0_seq1 255 1 .;locus=RLOC_00005845
Chr1	stalkie_big_nohaplotig	exon	13003045	13004177	99	-	.	Parent=comp163325_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	13003923	13004177	.	-	0	Parent=comp163325_c0_seq1.mrna5
Chr1	gffcl	locus	13018496	13028915	.	.	.	ID=RLOC_00005846;geneIDs=FBgn0053054.1.path1,comp160230_c0_seq2.path1;transcripts=FBgn0053054.1.mrna1,comp160230_c0_seq2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13018496	13028915	.	+	.	ID=FBgn0053054.1.mrna1;geneID=FBgn0053054.1.path1;Name=FBgn0053054.1;Dir=sensecoverage=100.0;identity=99.3;matches=605;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005846
Chr1	stalkie_big_nohaplotig	exon	13018496	13018619	100	+	.	Parent=FBgn0053054.1.mrna1;Target=FBgn0053054.1 1 124 +
Chr1	stalkie_big_nohaplotig	exon	13028365	13028705	99	+	.	Parent=FBgn0053054.1.mrna1;Target=FBgn0053054.1 125 465 +
Chr1	stalkie_big_nohaplotig	exon	13028772	13028915	98	+	.	Parent=FBgn0053054.1.mrna1;Target=FBgn0053054.1 466 609 +
Chr1	stalkie_big_nohaplotig	CDS	13018496	13018619	.	+	0	Parent=FBgn0053054.1.mrna1;Target=FBgn0053054.1 1 124 +
Chr1	stalkie_big_nohaplotig	CDS	13028365	13028705	.	+	2	Parent=FBgn0053054.1.mrna1;Target=FBgn0053054.1 125 465 +
Chr1	stalkie_big_nohaplotig	CDS	13028772	13028915	.	+	0	Parent=FBgn0053054.1.mrna1;Target=FBgn0053054.1 466 609 +
Chr1	stalkie_big_nohaplotig	mRNA	13027982	13028388	.	-	.	ID=comp160230_c0_seq2.mrna1;geneID=comp160230_c0_seq2.path1;Name=comp160230_c0_seq2;Dir=indeterminatecoverage=89.3;identity=98.3;matches=400;mismatches=7;indels=0;unknowns=0;Target=comp160230_c0_seq2 407 1 .;CDS_Target=comp160230_c0_seq2 59 3 .;locus=RLOC_00005846
Chr1	stalkie_big_nohaplotig	exon	13027982	13028388	98	-	.	Parent=comp160230_c0_seq2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13028330	13028386	.	-	0	Parent=comp160230_c0_seq2.mrna1
Chr1	gffcl	locus	13028986	13029577	.	-	.	ID=RLOC_00005848;geneIDs=FBgn0085290.1.path1;transcripts=FBgn0085290.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13028986	13029577	.	-	.	ID=FBgn0085290.1.mrna1;geneID=FBgn0085290.1.path1;Name=FBgn0085290.1;Dir=sensecoverage=100.0;identity=98.5;matches=470;mismatches=7;indels=0;unknowns=0;locus=RLOC_00005848
Chr1	stalkie_big_nohaplotig	exon	13028986	13029132	98	-	.	Parent=FBgn0085290.1.mrna1;Target=FBgn0085290.1 331 477 +
Chr1	stalkie_big_nohaplotig	exon	13029194	13029368	99	-	.	Parent=FBgn0085290.1.mrna1;Target=FBgn0085290.1 156 330 +
Chr1	stalkie_big_nohaplotig	exon	13029423	13029577	97	-	.	Parent=FBgn0085290.1.mrna1;Target=FBgn0085290.1 1 155 +
Chr1	stalkie_big_nohaplotig	CDS	13028986	13029132	.	-	0	Parent=FBgn0085290.1.mrna1;Target=FBgn0085290.1 331 477 +
Chr1	stalkie_big_nohaplotig	CDS	13029194	13029368	.	-	1	Parent=FBgn0085290.1.mrna1;Target=FBgn0085290.1 156 330 +
Chr1	stalkie_big_nohaplotig	CDS	13029423	13029577	.	-	0	Parent=FBgn0085290.1.mrna1;Target=FBgn0085290.1 1 155 +
Chr1	gffcl	locus	13031226	13033030	.	+	.	ID=RLOC_00005849;geneIDs=FBgn0041100.1.path1;transcripts=FBgn0041100.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13031226	13033030	.	+	.	ID=FBgn0041100.1.mrna1;geneID=FBgn0041100.1.path1;Name=FBgn0041100.1;Dir=sensecoverage=100.0;identity=99.0;matches=1438;mismatches=14;indels=0;unknowns=0;locus=RLOC_00005849
Chr1	stalkie_big_nohaplotig	exon	13031226	13031492	98	+	.	Parent=FBgn0041100.1.mrna1;Target=FBgn0041100.1 1 267 +
Chr1	stalkie_big_nohaplotig	exon	13031554	13031743	100	+	.	Parent=FBgn0041100.1.mrna1;Target=FBgn0041100.1 268 457 +
Chr1	stalkie_big_nohaplotig	exon	13031799	13032144	99	+	.	Parent=FBgn0041100.1.mrna1;Target=FBgn0041100.1 458 803 +
Chr1	stalkie_big_nohaplotig	exon	13032203	13032539	98	+	.	Parent=FBgn0041100.1.mrna1;Target=FBgn0041100.1 804 1140 +
Chr1	stalkie_big_nohaplotig	exon	13032605	13032712	98	+	.	Parent=FBgn0041100.1.mrna1;Target=FBgn0041100.1 1141 1248 +
Chr1	stalkie_big_nohaplotig	exon	13032771	13032867	97	+	.	Parent=FBgn0041100.1.mrna1;Target=FBgn0041100.1 1249 1345 +
Chr1	stalkie_big_nohaplotig	exon	13032924	13033030	99	+	.	Parent=FBgn0041100.1.mrna1;Target=FBgn0041100.1 1346 1452 +
Chr1	stalkie_big_nohaplotig	CDS	13031226	13031492	.	+	0	Parent=FBgn0041100.1.mrna1;Target=FBgn0041100.1 1 267 +
Chr1	stalkie_big_nohaplotig	CDS	13031554	13031743	.	+	0	Parent=FBgn0041100.1.mrna1;Target=FBgn0041100.1 268 457 +
Chr1	stalkie_big_nohaplotig	CDS	13031799	13032144	.	+	2	Parent=FBgn0041100.1.mrna1;Target=FBgn0041100.1 458 803 +
Chr1	stalkie_big_nohaplotig	CDS	13032203	13032539	.	+	1	Parent=FBgn0041100.1.mrna1;Target=FBgn0041100.1 804 1140 +
Chr1	stalkie_big_nohaplotig	CDS	13032605	13032712	.	+	0	Parent=FBgn0041100.1.mrna1;Target=FBgn0041100.1 1141 1248 +
Chr1	stalkie_big_nohaplotig	CDS	13032771	13032867	.	+	0	Parent=FBgn0041100.1.mrna1;Target=FBgn0041100.1 1249 1345 +
Chr1	stalkie_big_nohaplotig	CDS	13032924	13033030	.	+	2	Parent=FBgn0041100.1.mrna1;Target=FBgn0041100.1 1346 1452 +
Chr1	gffcl	locus	13039169	13041057	.	-	.	ID=RLOC_00005850;geneIDs=comp150791_c1_seq1.path1;transcripts=comp150791_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13039169	13041057	.	-	.	ID=comp150791_c1_seq1.mrna1;geneID=comp150791_c1_seq1.path1;Name=comp150791_c1_seq1;Dir=antisensecoverage=99.2;identity=97.2;matches=880;mismatches=7;indels=18;unknowns=0;Target=comp150791_c1_seq1 78 167 .;locus=RLOC_00005850
Chr1	stalkie_big_nohaplotig	exon	13039169	13039744	95	-	.	Parent=comp150791_c1_seq1.mrna1;Target=comp150791_c1_seq1 8 565 -
Chr1	stalkie_big_nohaplotig	exon	13040729	13041057	100	-	.	Parent=comp150791_c1_seq1.mrna1;Target=comp150791_c1_seq1 566 894 -
Chr1	stalkie_big_nohaplotig	CDS	13039239	13039328	.	-	0	Parent=comp150791_c1_seq1.mrna1
Chr1	gffcl	locus	13044476	13052943	.	+	.	ID=RLOC_00005851;geneIDs=ORF308.path1;transcripts=ORF308.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13044476	13052943	.	+	.	ID=ORF308.mrna1;geneID=ORF308.path1;Name=ORF308;Dir=sensecoverage=100.0;identity=99.5;matches=2065;mismatches=11;indels=0;unknowns=0;locus=RLOC_00005851
Chr1	stalkie_big_nohaplotig	exon	13044476	13045796	99	+	.	Parent=ORF308.mrna1;Target=ORF308 1 1321 +
Chr1	stalkie_big_nohaplotig	exon	13050229	13050320	100	+	.	Parent=ORF308.mrna1;Target=ORF308 1322 1413 +
Chr1	stalkie_big_nohaplotig	exon	13052206	13052559	99	+	.	Parent=ORF308.mrna1;Target=ORF308 1414 1767 +
Chr1	stalkie_big_nohaplotig	exon	13052635	13052943	99	+	.	Parent=ORF308.mrna1;Target=ORF308 1768 2076 +
Chr1	stalkie_big_nohaplotig	CDS	13044476	13045796	.	+	0	Parent=ORF308.mrna1;Target=ORF308 1 1321 +
Chr1	stalkie_big_nohaplotig	CDS	13050229	13050320	.	+	2	Parent=ORF308.mrna1;Target=ORF308 1322 1413 +
Chr1	stalkie_big_nohaplotig	CDS	13052206	13052559	.	+	0	Parent=ORF308.mrna1;Target=ORF308 1414 1767 +
Chr1	stalkie_big_nohaplotig	CDS	13052635	13052943	.	+	0	Parent=ORF308.mrna1;Target=ORF308 1768 2076 +
Chr1	gffcl	locus	13053536	13054030	.	+	.	ID=RLOC_00005852;geneIDs=comp155673_c0_seq1.path1;transcripts=comp155673_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13053536	13054030	.	+	.	ID=comp155673_c0_seq1.mrna1;geneID=comp155673_c0_seq1.path1;Name=comp155673_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=489;mismatches=6;indels=0;unknowns=0;Target=comp155673_c0_seq1 495 1 .;CDS_Target=comp155673_c0_seq1 103 2 .;locus=RLOC_00005852
Chr1	stalkie_big_nohaplotig	exon	13053536	13054030	98	+	.	Parent=comp155673_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13053537	13053638	.	+	0	Parent=comp155673_c0_seq1.mrna1
Chr1	gffcl	locus	13054066	13054359	.	+	.	ID=RLOC_00005853;geneIDs=comp145728_c0_seq1.path1;transcripts=comp145728_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13054066	13054359	.	+	.	ID=comp145728_c0_seq1.mrna1;geneID=comp145728_c0_seq1.path1;Name=comp145728_c0_seq1;Dir=indeterminatecoverage=95.7;identity=96.9;matches=285;mismatches=7;indels=2;unknowns=0;Target=comp145728_c0_seq1 292 1 .;CDS_Target=comp145728_c0_seq1 92 3 .;locus=RLOC_00005853
Chr1	stalkie_big_nohaplotig	exon	13054066	13054359	96	+	.	Parent=comp145728_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13054068	13054159	.	+	0	Parent=comp145728_c0_seq1.mrna1
Chr1	gffcl	locus	13054625	13054970	.	+	.	ID=RLOC_00005854;geneIDs=comp152871_c0_seq1.path1;transcripts=comp152871_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13054625	13054970	.	+	.	ID=comp152871_c0_seq1.mrna1;geneID=comp152871_c0_seq1.path1;Name=comp152871_c0_seq1;Dir=indeterminatecoverage=91.8;identity=98.3;matches=340;mismatches=6;indels=0;unknowns=0;Target=comp152871_c0_seq1 346 1 .;CDS_Target=comp152871_c0_seq1 300 253 .;locus=RLOC_00005854
Chr1	stalkie_big_nohaplotig	exon	13054625	13054970	98	+	.	Parent=comp152871_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13054877	13054924	.	+	0	Parent=comp152871_c0_seq1.mrna1
Chr1	gffcl	locus	13054989	13055369	.	+	.	ID=RLOC_00005855;geneIDs=comp142650_c0_seq1.path1;transcripts=comp142650_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13054989	13055369	.	+	.	ID=comp142650_c0_seq1.mrna1;geneID=comp142650_c0_seq1.path1;Name=comp142650_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=376;mismatches=3;indels=2;unknowns=0;Target=comp142650_c0_seq1 379 1 .;CDS_Target=comp142650_c0_seq1 114 1 .;locus=RLOC_00005855
Chr1	stalkie_big_nohaplotig	exon	13054989	13055369	98	+	.	Parent=comp142650_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13054989	13055102	.	+	0	Parent=comp142650_c0_seq1.mrna1
Chr1	gffcl	locus	13056119	13057563	.	-	.	ID=RLOC_00005856;geneIDs=FBgn0035273.1.path1;transcripts=FBgn0035273.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13056119	13057563	.	-	.	ID=FBgn0035273.1.mrna1;geneID=FBgn0035273.1.path1;Name=FBgn0035273.1;Dir=sensecoverage=100.0;identity=99.0;matches=1135;mismatches=5;indels=6;unknowns=0;locus=RLOC_00005856
Chr1	stalkie_big_nohaplotig	exon	13056119	13056252	100	-	.	Parent=FBgn0035273.1.mrna1;Target=FBgn0035273.1 1013 1146 +
Chr1	stalkie_big_nohaplotig	exon	13056312	13056562	99	-	.	Parent=FBgn0035273.1.mrna1;Target=FBgn0035273.1 762 1012 +
Chr1	stalkie_big_nohaplotig	exon	13056635	13056772	99	-	.	Parent=FBgn0035273.1.mrna1;Target=FBgn0035273.1 624 761 +
Chr1	stalkie_big_nohaplotig	exon	13056865	13057216	100	-	.	Parent=FBgn0035273.1.mrna1;Target=FBgn0035273.1 272 623 +
Chr1	stalkie_big_nohaplotig	exon	13057299	13057563	97	-	.	Parent=FBgn0035273.1.mrna1;Target=FBgn0035273.1 1 271 +
Chr1	stalkie_big_nohaplotig	CDS	13056119	13056252	.	-	2	Parent=FBgn0035273.1.mrna1;Target=FBgn0035273.1 1013 1146 +
Chr1	stalkie_big_nohaplotig	CDS	13056312	13056562	.	-	1	Parent=FBgn0035273.1.mrna1;Target=FBgn0035273.1 762 1012 +
Chr1	stalkie_big_nohaplotig	CDS	13056635	13056772	.	-	1	Parent=FBgn0035273.1.mrna1;Target=FBgn0035273.1 624 761 +
Chr1	stalkie_big_nohaplotig	CDS	13056865	13057216	.	-	2	Parent=FBgn0035273.1.mrna1;Target=FBgn0035273.1 272 623 +
Chr1	stalkie_big_nohaplotig	CDS	13057299	13057563	.	-	0	Parent=FBgn0035273.1.mrna1;Target=FBgn0035273.1 1 271 +
Chr1	gffcl	locus	13058297	13061117	.	+	.	ID=RLOC_00005857;geneIDs=FBgn0067864.1.path1;transcripts=FBgn0067864.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13058297	13061117	.	+	.	ID=FBgn0067864.1.mrna1;geneID=FBgn0067864.1.path1;Name=FBgn0067864.1;Dir=sensecoverage=100.0;identity=99.8;matches=2752;mismatches=5;indels=0;unknowns=0;locus=RLOC_00005857
Chr1	stalkie_big_nohaplotig	exon	13058297	13060009	99	+	.	Parent=FBgn0067864.1.mrna1;Target=FBgn0067864.1 1 1713 +
Chr1	stalkie_big_nohaplotig	exon	13060074	13061117	99	+	.	Parent=FBgn0067864.1.mrna1;Target=FBgn0067864.1 1714 2757 +
Chr1	stalkie_big_nohaplotig	CDS	13058297	13060009	.	+	0	Parent=FBgn0067864.1.mrna1;Target=FBgn0067864.1 1 1713 +
Chr1	stalkie_big_nohaplotig	CDS	13060074	13061117	.	+	0	Parent=FBgn0067864.1.mrna1;Target=FBgn0067864.1 1714 2757 +
Chr1	gffcl	locus	13061562	13062047	.	-	.	ID=RLOC_00005858;geneIDs=FBgn0025820.1.path1;transcripts=FBgn0025820.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13061562	13062047	.	-	.	ID=FBgn0025820.1.mrna1;geneID=FBgn0025820.1.path1;Name=FBgn0025820.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=483;mismatches=3;indels=0;unknowns=0;Target=FBgn0025820.1 486 1 .;locus=RLOC_00005858
Chr1	stalkie_big_nohaplotig	exon	13061562	13062047	99	-	.	Parent=FBgn0025820.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13061562	13062047	.	-	0	Parent=FBgn0025820.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13148097	13154988	.	+	.	ID=FBgn0031170.2.mrna1;geneID=FBgn0031170.2.path1;Name=FBgn0031170.2;Dir=sensecoverage=99.9;identity=99.8;matches=4923;mismatches=12;indels=0;unknowns=0;locus=RLOC_00005859
Chr1	stalkie_big_nohaplotig	exon	13148097	13148320	97	+	.	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 7 230 +
Chr1	stalkie_big_nohaplotig	exon	13148375	13148921	99	+	.	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 231 777 +
Chr1	stalkie_big_nohaplotig	exon	13148971	13149114	100	+	.	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 778 921 +
Chr1	stalkie_big_nohaplotig	exon	13149814	13151082	100	+	.	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 922 2190 +
Chr1	stalkie_big_nohaplotig	exon	13151153	13151438	100	+	.	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 2191 2476 +
Chr1	stalkie_big_nohaplotig	exon	13151533	13152043	100	+	.	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 2477 2987 +
Chr1	stalkie_big_nohaplotig	exon	13152111	13152457	99	+	.	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 2988 3334 +
Chr1	stalkie_big_nohaplotig	exon	13152519	13152644	100	+	.	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 3335 3460 +
Chr1	stalkie_big_nohaplotig	exon	13152706	13152891	99	+	.	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 3461 3646 +
Chr1	stalkie_big_nohaplotig	exon	13152956	13153106	99	+	.	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 3647 3797 +
Chr1	stalkie_big_nohaplotig	exon	13153636	13153812	98	+	.	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 3798 3974 +
Chr1	stalkie_big_nohaplotig	exon	13153882	13154550	99	+	.	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 3975 4643 +
Chr1	stalkie_big_nohaplotig	exon	13154614	13154745	100	+	.	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 4644 4775 +
Chr1	stalkie_big_nohaplotig	exon	13154823	13154988	100	+	.	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 4776 4941 +
Chr1	stalkie_big_nohaplotig	CDS	13148097	13148320	.	+	0	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 7 230 +
Chr1	stalkie_big_nohaplotig	CDS	13148375	13148921	.	+	1	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 231 777 +
Chr1	stalkie_big_nohaplotig	CDS	13148971	13149114	.	+	0	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 778 921 +
Chr1	stalkie_big_nohaplotig	CDS	13149814	13151082	.	+	0	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 922 2190 +
Chr1	stalkie_big_nohaplotig	CDS	13151153	13151438	.	+	0	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 2191 2476 +
Chr1	stalkie_big_nohaplotig	CDS	13151533	13152043	.	+	2	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 2477 2987 +
Chr1	stalkie_big_nohaplotig	CDS	13152111	13152457	.	+	1	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 2988 3334 +
Chr1	stalkie_big_nohaplotig	CDS	13152519	13152644	.	+	2	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 3335 3460 +
Chr1	stalkie_big_nohaplotig	CDS	13152706	13152891	.	+	2	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 3461 3646 +
Chr1	stalkie_big_nohaplotig	CDS	13152956	13153106	.	+	2	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 3647 3797 +
Chr1	stalkie_big_nohaplotig	CDS	13153636	13153812	.	+	1	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 3798 3974 +
Chr1	stalkie_big_nohaplotig	CDS	13153882	13154550	.	+	1	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 3975 4643 +
Chr1	stalkie_big_nohaplotig	CDS	13154614	13154745	.	+	1	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 4644 4775 +
Chr1	stalkie_big_nohaplotig	CDS	13154823	13154988	.	+	1	Parent=FBgn0031170.2.mrna1;Target=FBgn0031170.2 4776 4941 +
Chr1	stalkie_big_nohaplotig	mRNA	13399828	13400877	.	-	.	ID=comp152002_c0_seq1.mrna1;geneID=comp152002_c0_seq1.path1;Name=comp152002_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1047;mismatches=2;indels=2;unknowns=0;Target=comp152002_c0_seq1 1050 1 .;CDS_Target=comp152002_c0_seq1 757 668 .;locus=RLOC_00005859
Chr1	stalkie_big_nohaplotig	exon	13399828	13400877	99	-	.	Parent=comp152002_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13400121	13400211	.	-	0	Parent=comp152002_c0_seq1.mrna1
Chr1	gffcl	locus	13130148	13130737	.	+	.	ID=RLOC_00005860;geneIDs=comp144210_c0_seq1.path1;transcripts=comp144210_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13130148	13130737	.	+	.	ID=comp144210_c0_seq1.mrna1;geneID=comp144210_c0_seq1.path1;Name=comp144210_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.8;matches=583;mismatches=7;indels=0;unknowns=0;Target=comp144210_c0_seq1 591 2 .;CDS_Target=comp144210_c0_seq1 292 173 .;locus=RLOC_00005860
Chr1	stalkie_big_nohaplotig	exon	13130148	13130737	98	+	.	Parent=comp144210_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13130319	13130438	.	+	0	Parent=comp144210_c0_seq1.mrna1
Chr1	gffcl	locus	13138053	13139092	.	+	.	ID=RLOC_00005861;geneIDs=comp109134_c0_seq1.path1;transcripts=comp109134_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13138053	13139092	.	+	.	ID=comp109134_c0_seq1.mrna1;geneID=comp109134_c0_seq1.path1;Name=comp109134_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.8;matches=1024;mismatches=1;indels=22;unknowns=0;Target=comp109134_c0_seq1 1032 1 .;CDS_Target=comp109134_c0_seq1 788 660 .;locus=RLOC_00005861
Chr1	stalkie_big_nohaplotig	exon	13138053	13139092	97	+	.	Parent=comp109134_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13138720	13138848	.	+	0	Parent=comp109134_c0_seq1.mrna1
Chr1	gffcl	locus	13203657	13282394	.	+	.	ID=RLOC_00005862;geneIDs=FBgn0010194.1.path1;transcripts=FBgn0010194.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13203657	13282394	.	+	.	ID=FBgn0010194.1.mrna1;geneID=FBgn0010194.1.path1;Name=FBgn0010194.1;Dir=sensecoverage=61.7;identity=99.9;matches=2161;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005862
Chr1	stalkie_big_nohaplotig	exon	13203657	13203887	100	+	.	Parent=FBgn0010194.1.mrna1;Target=FBgn0010194.1 1345 1575 +
Chr1	stalkie_big_nohaplotig	exon	13205032	13206421	99	+	.	Parent=FBgn0010194.1.mrna1;Target=FBgn0010194.1 1576 2965 +
Chr1	stalkie_big_nohaplotig	exon	13275495	13275666	100	+	.	Parent=FBgn0010194.1.mrna1;Target=FBgn0010194.1 2966 3137 +
Chr1	stalkie_big_nohaplotig	exon	13275742	13275866	100	+	.	Parent=FBgn0010194.1.mrna1;Target=FBgn0010194.1 3138 3262 +
Chr1	stalkie_big_nohaplotig	exon	13278907	13279030	99	+	.	Parent=FBgn0010194.1.mrna1;Target=FBgn0010194.1 3263 3386 +
Chr1	stalkie_big_nohaplotig	exon	13282274	13282394	100	+	.	Parent=FBgn0010194.1.mrna1;Target=FBgn0010194.1 3387 3507 +
Chr1	stalkie_big_nohaplotig	CDS	13203657	13203887	.	+	0	Parent=FBgn0010194.1.mrna1;Target=FBgn0010194.1 1345 1575 +
Chr1	stalkie_big_nohaplotig	CDS	13205032	13206421	.	+	0	Parent=FBgn0010194.1.mrna1;Target=FBgn0010194.1 1576 2965 +
Chr1	stalkie_big_nohaplotig	CDS	13275495	13275666	.	+	2	Parent=FBgn0010194.1.mrna1;Target=FBgn0010194.1 2966 3137 +
Chr1	stalkie_big_nohaplotig	CDS	13275742	13275866	.	+	1	Parent=FBgn0010194.1.mrna1;Target=FBgn0010194.1 3138 3262 +
Chr1	stalkie_big_nohaplotig	CDS	13278907	13279030	.	+	2	Parent=FBgn0010194.1.mrna1;Target=FBgn0010194.1 3263 3386 +
Chr1	stalkie_big_nohaplotig	CDS	13282274	13282394	.	+	1	Parent=FBgn0010194.1.mrna1;Target=FBgn0010194.1 3387 3507 +
Chr1	gffcl	locus	13277863	13285768	.	-	.	ID=RLOC_00005863;geneIDs=comp147905_c0_seq1.path1;transcripts=comp147905_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13277863	13285768	.	-	.	ID=comp147905_c0_seq1.mrna1;geneID=comp147905_c0_seq1.path1;Name=comp147905_c0_seq1;Dir=indeterminatecoverage=75.7;identity=96.3;matches=679;mismatches=11;indels=15;unknowns=0;Target=comp147905_c0_seq1 900 814 .;locus=RLOC_00005863
Chr1	stalkie_big_nohaplotig	exon	13277863	13278530	96	-	.	Parent=comp147905_c0_seq1.mrna1;Target=comp147905_c0_seq1 951 269 .
Chr1	stalkie_big_nohaplotig	exon	13280790	13280797	100	-	.	Parent=comp147905_c0_seq1.mrna1;Target=comp147905_c0_seq1 268 261 .
Chr1	stalkie_big_nohaplotig	exon	13285130	13285134	100	-	.	Parent=comp147905_c0_seq1.mrna1;Target=comp147905_c0_seq1 245 241 .
Chr1	stalkie_big_nohaplotig	exon	13285760	13285768	100	-	.	Parent=comp147905_c0_seq1.mrna1;Target=comp147905_c0_seq1 240 232 .
Chr1	stalkie_big_nohaplotig	CDS	13277914	13278000	.	-	0	Parent=comp147905_c0_seq1.mrna1
Chr1	gffcl	locus	13283397	13284602	.	-	.	ID=RLOC_00005864;geneIDs=comp157714_c0_seq1.path1;transcripts=comp157714_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13283397	13284602	.	-	.	ID=comp157714_c0_seq1.mrna1;geneID=comp157714_c0_seq1.path1;Name=comp157714_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1195;mismatches=11;indels=4;unknowns=0;Target=comp157714_c0_seq1 1210 1 .;CDS_Target=comp157714_c0_seq1 891 733 .;locus=RLOC_00005864
Chr1	stalkie_big_nohaplotig	exon	13283397	13284602	98	-	.	Parent=comp157714_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13283716	13283874	.	-	0	Parent=comp157714_c0_seq1.mrna1
Chr1	gffcl	locus	13290482	13291220	.	+	.	ID=RLOC_00005865;geneIDs=FBgn0035640.1.path1;transcripts=FBgn0035640.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13290482	13291220	.	+	.	ID=FBgn0035640.1.mrna1;geneID=FBgn0035640.1.path1;Name=FBgn0035640.1;Dir=sensecoverage=100.0;identity=99.0;matches=621;mismatches=6;indels=0;unknowns=0;locus=RLOC_00005865
Chr1	stalkie_big_nohaplotig	exon	13290482	13290554	98	+	.	Parent=FBgn0035640.1.mrna1;Target=FBgn0035640.1 1 73 +
Chr1	stalkie_big_nohaplotig	exon	13290611	13290757	99	+	.	Parent=FBgn0035640.1.mrna1;Target=FBgn0035640.1 74 220 +
Chr1	stalkie_big_nohaplotig	exon	13290814	13291220	99	+	.	Parent=FBgn0035640.1.mrna1;Target=FBgn0035640.1 221 627 +
Chr1	stalkie_big_nohaplotig	CDS	13290482	13290554	.	+	0	Parent=FBgn0035640.1.mrna1;Target=FBgn0035640.1 1 73 +
Chr1	stalkie_big_nohaplotig	CDS	13290611	13290757	.	+	2	Parent=FBgn0035640.1.mrna1;Target=FBgn0035640.1 74 220 +
Chr1	stalkie_big_nohaplotig	CDS	13290814	13291220	.	+	2	Parent=FBgn0035640.1.mrna1;Target=FBgn0035640.1 221 627 +
Chr1	gffcl	locus	13291362	13295007	.	+	.	ID=RLOC_00005866;geneIDs=FBgn0010741.1.path1;transcripts=FBgn0010741.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13291362	13295007	.	+	.	ID=FBgn0010741.1.mrna1;geneID=FBgn0010741.1.path1;Name=FBgn0010741.1;Dir=sensecoverage=100.0;identity=99.8;matches=581;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005866
Chr1	stalkie_big_nohaplotig	exon	13291362	13291451	98	+	.	Parent=FBgn0010741.1.mrna1;Target=FBgn0010741.1 1 90 +
Chr1	stalkie_big_nohaplotig	exon	13294439	13294635	100	+	.	Parent=FBgn0010741.1.mrna1;Target=FBgn0010741.1 91 287 +
Chr1	stalkie_big_nohaplotig	exon	13294713	13295007	100	+	.	Parent=FBgn0010741.1.mrna1;Target=FBgn0010741.1 288 582 +
Chr1	stalkie_big_nohaplotig	CDS	13291362	13291451	.	+	0	Parent=FBgn0010741.1.mrna1;Target=FBgn0010741.1 1 90 +
Chr1	stalkie_big_nohaplotig	CDS	13294439	13294635	.	+	0	Parent=FBgn0010741.1.mrna1;Target=FBgn0010741.1 91 287 +
Chr1	stalkie_big_nohaplotig	CDS	13294713	13295007	.	+	1	Parent=FBgn0010741.1.mrna1;Target=FBgn0010741.1 288 582 +
Chr1	gffcl	locus	13292548	13293589	.	-	.	ID=RLOC_00005867;geneIDs=FBgn0035639.1.path1;transcripts=FBgn0035639.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13292548	13293589	.	-	.	ID=FBgn0035639.1.mrna1;geneID=FBgn0035639.1.path1;Name=FBgn0035639.1;Dir=sensecoverage=100.0;identity=99.5;matches=776;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005867
Chr1	stalkie_big_nohaplotig	exon	13292548	13292727	99	-	.	Parent=FBgn0035639.1.mrna1;Target=FBgn0035639.1 601 780 +
Chr1	stalkie_big_nohaplotig	exon	13292786	13292952	100	-	.	Parent=FBgn0035639.1.mrna1;Target=FBgn0035639.1 434 600 +
Chr1	stalkie_big_nohaplotig	exon	13293020	13293213	98	-	.	Parent=FBgn0035639.1.mrna1;Target=FBgn0035639.1 240 433 +
Chr1	stalkie_big_nohaplotig	exon	13293268	13293421	100	-	.	Parent=FBgn0035639.1.mrna1;Target=FBgn0035639.1 86 239 +
Chr1	stalkie_big_nohaplotig	exon	13293505	13293589	98	-	.	Parent=FBgn0035639.1.mrna1;Target=FBgn0035639.1 1 85 +
Chr1	stalkie_big_nohaplotig	CDS	13292548	13292727	.	-	0	Parent=FBgn0035639.1.mrna1;Target=FBgn0035639.1 601 780 +
Chr1	stalkie_big_nohaplotig	CDS	13292786	13292952	.	-	2	Parent=FBgn0035639.1.mrna1;Target=FBgn0035639.1 434 600 +
Chr1	stalkie_big_nohaplotig	CDS	13293020	13293213	.	-	1	Parent=FBgn0035639.1.mrna1;Target=FBgn0035639.1 240 433 +
Chr1	stalkie_big_nohaplotig	CDS	13293268	13293421	.	-	2	Parent=FBgn0035639.1.mrna1;Target=FBgn0035639.1 86 239 +
Chr1	stalkie_big_nohaplotig	CDS	13293505	13293589	.	-	0	Parent=FBgn0035639.1.mrna1;Target=FBgn0035639.1 1 85 +
Chr1	gffcl	locus	13295592	13298145	.	-	.	ID=RLOC_00005868;geneIDs=FBgn0263241.1.path1;transcripts=FBgn0263241.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13295592	13298145	.	-	.	ID=FBgn0263241.1.mrna1;geneID=FBgn0263241.1.path1;Name=FBgn0263241.1;Dir=sensecoverage=99.8;identity=99.4;matches=1482;mismatches=8;indels=1;unknowns=0;locus=RLOC_00005868
Chr1	stalkie_big_nohaplotig	exon	13295592	13295958	99	-	.	Parent=FBgn0263241.1.mrna1;Target=FBgn0263241.1 1127 1494 +
Chr1	stalkie_big_nohaplotig	exon	13296171	13296302	99	-	.	Parent=FBgn0263241.1.mrna1;Target=FBgn0263241.1 995 1126 +
Chr1	stalkie_big_nohaplotig	exon	13296365	13296540	98	-	.	Parent=FBgn0263241.1.mrna1;Target=FBgn0263241.1 819 994 +
Chr1	stalkie_big_nohaplotig	exon	13296904	13297276	100	-	.	Parent=FBgn0263241.1.mrna1;Target=FBgn0263241.1 446 818 +
Chr1	stalkie_big_nohaplotig	exon	13297347	13297514	98	-	.	Parent=FBgn0263241.1.mrna1;Target=FBgn0263241.1 278 445 +
Chr1	stalkie_big_nohaplotig	exon	13297800	13297902	100	-	.	Parent=FBgn0263241.1.mrna1;Target=FBgn0263241.1 175 277 +
Chr1	stalkie_big_nohaplotig	exon	13297975	13298145	98	-	.	Parent=FBgn0263241.1.mrna1;Target=FBgn0263241.1 4 174 +
Chr1	stalkie_big_nohaplotig	CDS	13295592	13295958	.	-	2	Parent=FBgn0263241.1.mrna1;Target=FBgn0263241.1 1127 1494 +
Chr1	stalkie_big_nohaplotig	CDS	13296171	13296302	.	-	2	Parent=FBgn0263241.1.mrna1;Target=FBgn0263241.1 995 1126 +
Chr1	stalkie_big_nohaplotig	CDS	13296365	13296540	.	-	1	Parent=FBgn0263241.1.mrna1;Target=FBgn0263241.1 819 994 +
Chr1	stalkie_big_nohaplotig	CDS	13296904	13297276	.	-	2	Parent=FBgn0263241.1.mrna1;Target=FBgn0263241.1 446 818 +
Chr1	stalkie_big_nohaplotig	CDS	13297347	13297514	.	-	2	Parent=FBgn0263241.1.mrna1;Target=FBgn0263241.1 278 445 +
Chr1	stalkie_big_nohaplotig	CDS	13297800	13297902	.	-	0	Parent=FBgn0263241.1.mrna1;Target=FBgn0263241.1 175 277 +
Chr1	stalkie_big_nohaplotig	CDS	13297975	13298145	.	-	0	Parent=FBgn0263241.1.mrna1;Target=FBgn0263241.1 4 174 +
Chr1	gffcl	locus	13300424	13302768	.	+	.	ID=RLOC_00005869;geneIDs=FBgn0036121.1.path1;transcripts=FBgn0036121.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13300424	13302768	.	+	.	ID=FBgn0036121.1.mrna1;geneID=FBgn0036121.1.path1;Name=FBgn0036121.1;Dir=sensecoverage=100.0;identity=99.8;matches=578;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005869
Chr1	stalkie_big_nohaplotig	exon	13300424	13300614	100	+	.	Parent=FBgn0036121.1.mrna1;Target=FBgn0036121.1 1 191 +
Chr1	stalkie_big_nohaplotig	exon	13300817	13301025	99	+	.	Parent=FBgn0036121.1.mrna1;Target=FBgn0036121.1 192 400 +
Chr1	stalkie_big_nohaplotig	exon	13302590	13302768	100	+	.	Parent=FBgn0036121.1.mrna1;Target=FBgn0036121.1 401 579 +
Chr1	stalkie_big_nohaplotig	CDS	13300424	13300614	.	+	0	Parent=FBgn0036121.1.mrna1;Target=FBgn0036121.1 1 191 +
Chr1	stalkie_big_nohaplotig	CDS	13300817	13301025	.	+	1	Parent=FBgn0036121.1.mrna1;Target=FBgn0036121.1 192 400 +
Chr1	stalkie_big_nohaplotig	CDS	13302590	13302768	.	+	2	Parent=FBgn0036121.1.mrna1;Target=FBgn0036121.1 401 579 +
Chr1	gffcl	locus	13303556	13308063	.	-	.	ID=RLOC_00005870;geneIDs=FBgn0025355.1.path1;transcripts=FBgn0025355.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13303556	13308063	.	-	.	ID=FBgn0025355.1.mrna1;geneID=FBgn0025355.1.path1;Name=FBgn0025355.1;Dir=sensecoverage=100.0;identity=99.7;matches=3310;mismatches=11;indels=0;unknowns=0;locus=RLOC_00005870
Chr1	stalkie_big_nohaplotig	exon	13303556	13306106	99	-	.	Parent=FBgn0025355.1.mrna1;Target=FBgn0025355.1 771 3321 +
Chr1	stalkie_big_nohaplotig	exon	13306162	13306340	100	-	.	Parent=FBgn0025355.1.mrna1;Target=FBgn0025355.1 592 770 +
Chr1	stalkie_big_nohaplotig	exon	13307402	13307598	99	-	.	Parent=FBgn0025355.1.mrna1;Target=FBgn0025355.1 395 591 +
Chr1	stalkie_big_nohaplotig	exon	13307670	13308063	100	-	.	Parent=FBgn0025355.1.mrna1;Target=FBgn0025355.1 1 394 +
Chr1	stalkie_big_nohaplotig	CDS	13303556	13306106	.	-	1	Parent=FBgn0025355.1.mrna1;Target=FBgn0025355.1 771 3321 +
Chr1	stalkie_big_nohaplotig	CDS	13306162	13306340	.	-	0	Parent=FBgn0025355.1.mrna1;Target=FBgn0025355.1 592 770 +
Chr1	stalkie_big_nohaplotig	CDS	13307402	13307598	.	-	2	Parent=FBgn0025355.1.mrna1;Target=FBgn0025355.1 395 591 +
Chr1	stalkie_big_nohaplotig	CDS	13307670	13308063	.	-	0	Parent=FBgn0025355.1.mrna1;Target=FBgn0025355.1 1 394 +
Chr1	gffcl	locus	13309394	13310492	.	+	.	ID=RLOC_00005871;geneIDs=FBgn0051251.1.path1;transcripts=FBgn0051251.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13309394	13310492	.	+	.	ID=FBgn0051251.1.mrna1;geneID=FBgn0051251.1.path1;Name=FBgn0051251.1;Dir=sensecoverage=100.0;identity=98.5;matches=970;mismatches=8;indels=7;unknowns=0;locus=RLOC_00005871
Chr1	stalkie_big_nohaplotig	exon	13309394	13309582	95	+	.	Parent=FBgn0051251.1.mrna1;Target=FBgn0051251.1 1 182 +
Chr1	stalkie_big_nohaplotig	exon	13309634	13310154	99	+	.	Parent=FBgn0051251.1.mrna1;Target=FBgn0051251.1 183 703 +
Chr1	stalkie_big_nohaplotig	exon	13310218	13310492	99	+	.	Parent=FBgn0051251.1.mrna1;Target=FBgn0051251.1 704 978 +
Chr1	stalkie_big_nohaplotig	CDS	13309485	13309582	.	+	0	Parent=FBgn0051251.1.mrna1;Target=FBgn0051251.1 85 182 +
Chr1	stalkie_big_nohaplotig	CDS	13309634	13310154	.	+	1	Parent=FBgn0051251.1.mrna1;Target=FBgn0051251.1 183 703 +
Chr1	stalkie_big_nohaplotig	CDS	13310218	13310492	.	+	2	Parent=FBgn0051251.1.mrna1;Target=FBgn0051251.1 704 978 +
Chr1	gffcl	locus	13310614	13311505	.	-	.	ID=RLOC_00005872;geneIDs=FBgn0038536.1.path1;transcripts=FBgn0038536.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13310614	13311505	.	-	.	ID=FBgn0038536.1.mrna1;geneID=FBgn0038536.1.path1;Name=FBgn0038536.1;Dir=sensecoverage=100.0;identity=99.2;matches=780;mismatches=6;indels=0;unknowns=0;locus=RLOC_00005872
Chr1	stalkie_big_nohaplotig	exon	13310614	13310889	98	-	.	Parent=FBgn0038536.1.mrna1;Target=FBgn0038536.1 511 786 +
Chr1	stalkie_big_nohaplotig	exon	13310945	13311115	98	-	.	Parent=FBgn0038536.1.mrna1;Target=FBgn0038536.1 340 510 +
Chr1	stalkie_big_nohaplotig	exon	13311167	13311505	100	-	.	Parent=FBgn0038536.1.mrna1;Target=FBgn0038536.1 1 339 +
Chr1	stalkie_big_nohaplotig	CDS	13310614	13310889	.	-	0	Parent=FBgn0038536.1.mrna1;Target=FBgn0038536.1 511 786 +
Chr1	stalkie_big_nohaplotig	CDS	13310945	13311115	.	-	0	Parent=FBgn0038536.1.mrna1;Target=FBgn0038536.1 340 510 +
Chr1	stalkie_big_nohaplotig	CDS	13311167	13311505	.	-	0	Parent=FBgn0038536.1.mrna1;Target=FBgn0038536.1 1 339 +
Chr1	gffcl	locus	13312050	13312857	.	+	.	ID=RLOC_00005873;geneIDs=comp126627_c0_seq1.path1;transcripts=comp126627_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13312050	13312857	.	+	.	ID=comp126627_c0_seq1.mrna1;geneID=comp126627_c0_seq1.path1;Name=comp126627_c0_seq1;Dir=antisensecoverage=92.4;identity=99.6;matches=742;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005873
Chr1	stalkie_big_nohaplotig	exon	13312050	13312466	99	+	.	Parent=comp126627_c0_seq1.mrna1;Target=comp126627_c0_seq1 365 781 -
Chr1	stalkie_big_nohaplotig	exon	13312530	13312857	99	+	.	Parent=comp126627_c0_seq1.mrna1;Target=comp126627_c0_seq1 37 364 -
Chr1	stalkie_big_nohaplotig	CDS	13312194	13312466	.	+	0	Parent=comp126627_c0_seq1.mrna1;Target=comp126627_c0_seq1 365 637 .
Chr1	stalkie_big_nohaplotig	CDS	13312530	13312706	.	+	0	Parent=comp126627_c0_seq1.mrna1;Target=comp126627_c0_seq1 188 364 .
Chr1	gffcl	locus	13313156	13313916	.	+	.	ID=RLOC_00005874;geneIDs=comp58942_c0_seq1.path1;transcripts=comp58942_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13313156	13313916	.	+	.	ID=comp58942_c0_seq1.mrna1;geneID=comp58942_c0_seq1.path1;Name=comp58942_c0_seq1;Dir=sensecoverage=94.0;identity=99.4;matches=695;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005874
Chr1	stalkie_big_nohaplotig	exon	13313156	13313509	99	+	.	Parent=comp58942_c0_seq1.mrna1;Target=comp58942_c0_seq1 32 385 +
Chr1	stalkie_big_nohaplotig	exon	13313572	13313916	99	+	.	Parent=comp58942_c0_seq1.mrna1;Target=comp58942_c0_seq1 386 730 +
Chr1	stalkie_big_nohaplotig	CDS	13313240	13313509	.	+	0	Parent=comp58942_c0_seq1.mrna1;Target=comp58942_c0_seq1 116 385 +
Chr1	stalkie_big_nohaplotig	CDS	13313572	13313748	.	+	0	Parent=comp58942_c0_seq1.mrna1;Target=comp58942_c0_seq1 386 562 +
Chr1	gffcl	locus	13314956	13315446	.	+	.	ID=RLOC_00005875;geneIDs=FBgn0052069.1.path1;transcripts=FBgn0052069.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13314956	13315446	.	+	.	ID=FBgn0052069.1.mrna1;geneID=FBgn0052069.1.path1;Name=FBgn0052069.1;Dir=sensecoverage=100.0;identity=98.4;matches=372;mismatches=6;indels=0;unknowns=0;locus=RLOC_00005875
Chr1	stalkie_big_nohaplotig	exon	13314956	13315181	97	+	.	Parent=FBgn0052069.1.mrna1;Target=FBgn0052069.1 1 226 +
Chr1	stalkie_big_nohaplotig	exon	13315240	13315338	98	+	.	Parent=FBgn0052069.1.mrna1;Target=FBgn0052069.1 227 325 +
Chr1	stalkie_big_nohaplotig	exon	13315394	13315446	100	+	.	Parent=FBgn0052069.1.mrna1;Target=FBgn0052069.1 326 378 +
Chr1	stalkie_big_nohaplotig	CDS	13315094	13315181	.	+	0	Parent=FBgn0052069.1.mrna1;Target=FBgn0052069.1 139 226 +
Chr1	stalkie_big_nohaplotig	CDS	13315240	13315338	.	+	2	Parent=FBgn0052069.1.mrna1;Target=FBgn0052069.1 227 325 +
Chr1	stalkie_big_nohaplotig	CDS	13315394	13315446	.	+	2	Parent=FBgn0052069.1.mrna1;Target=FBgn0052069.1 326 378 +
Chr1	gffcl	locus	13315513	13316033	.	-	.	ID=RLOC_00005876;geneIDs=FBgn0036118.1.path1;transcripts=FBgn0036118.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13315513	13316033	.	-	.	ID=FBgn0036118.1.mrna1;geneID=FBgn0036118.1.path1;Name=FBgn0036118.1;Dir=sensecoverage=100.0;identity=100.0;matches=462;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005876
Chr1	stalkie_big_nohaplotig	exon	13315513	13315650	100	-	.	Parent=FBgn0036118.1.mrna1;Target=FBgn0036118.1 325 462 +
Chr1	stalkie_big_nohaplotig	exon	13315710	13316033	100	-	.	Parent=FBgn0036118.1.mrna1;Target=FBgn0036118.1 1 324 +
Chr1	stalkie_big_nohaplotig	CDS	13315513	13315650	.	-	0	Parent=FBgn0036118.1.mrna1;Target=FBgn0036118.1 325 462 +
Chr1	stalkie_big_nohaplotig	CDS	13315710	13316033	.	-	0	Parent=FBgn0036118.1.mrna1;Target=FBgn0036118.1 1 324 +
Chr1	gffcl	locus	13317768	13319542	.	+	.	ID=RLOC_00005877;geneIDs=FBgn0036117.1.path1;transcripts=FBgn0036117.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13317768	13319542	.	+	.	ID=FBgn0036117.1.mrna1;geneID=FBgn0036117.1.path1;Name=FBgn0036117.1;Dir=sensecoverage=100.0;identity=99.5;matches=1358;mismatches=7;indels=0;unknowns=0;locus=RLOC_00005877
Chr1	stalkie_big_nohaplotig	exon	13317768	13317892	100	+	.	Parent=FBgn0036117.1.mrna1;Target=FBgn0036117.1 1 125 +
Chr1	stalkie_big_nohaplotig	exon	13317973	13318123	100	+	.	Parent=FBgn0036117.1.mrna1;Target=FBgn0036117.1 126 276 +
Chr1	stalkie_big_nohaplotig	exon	13318183	13318304	98	+	.	Parent=FBgn0036117.1.mrna1;Target=FBgn0036117.1 277 398 +
Chr1	stalkie_big_nohaplotig	exon	13318387	13318541	99	+	.	Parent=FBgn0036117.1.mrna1;Target=FBgn0036117.1 399 553 +
Chr1	stalkie_big_nohaplotig	exon	13318608	13318754	100	+	.	Parent=FBgn0036117.1.mrna1;Target=FBgn0036117.1 554 700 +
Chr1	stalkie_big_nohaplotig	exon	13318821	13319070	100	+	.	Parent=FBgn0036117.1.mrna1;Target=FBgn0036117.1 701 950 +
Chr1	stalkie_big_nohaplotig	exon	13319128	13319542	99	+	.	Parent=FBgn0036117.1.mrna1;Target=FBgn0036117.1 951 1365 +
Chr1	stalkie_big_nohaplotig	CDS	13317768	13317892	.	+	0	Parent=FBgn0036117.1.mrna1;Target=FBgn0036117.1 1 125 +
Chr1	stalkie_big_nohaplotig	CDS	13317973	13318123	.	+	1	Parent=FBgn0036117.1.mrna1;Target=FBgn0036117.1 126 276 +
Chr1	stalkie_big_nohaplotig	CDS	13318183	13318304	.	+	0	Parent=FBgn0036117.1.mrna1;Target=FBgn0036117.1 277 398 +
Chr1	stalkie_big_nohaplotig	CDS	13318387	13318541	.	+	1	Parent=FBgn0036117.1.mrna1;Target=FBgn0036117.1 399 553 +
Chr1	stalkie_big_nohaplotig	CDS	13318608	13318754	.	+	2	Parent=FBgn0036117.1.mrna1;Target=FBgn0036117.1 554 700 +
Chr1	stalkie_big_nohaplotig	CDS	13318821	13319070	.	+	2	Parent=FBgn0036117.1.mrna1;Target=FBgn0036117.1 701 950 +
Chr1	stalkie_big_nohaplotig	CDS	13319128	13319542	.	+	1	Parent=FBgn0036117.1.mrna1;Target=FBgn0036117.1 951 1365 +
Chr1	gffcl	locus	13320051	13321579	.	-	.	ID=RLOC_00005878;geneIDs=FBgn0030963.1.path1;transcripts=FBgn0030963.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13320051	13321579	.	-	.	ID=FBgn0030963.1.mrna1;geneID=FBgn0030963.1.path1;Name=FBgn0030963.1;Dir=sensecoverage=100.0;identity=99.2;matches=1464;mismatches=12;indels=0;unknowns=0;locus=RLOC_00005878
Chr1	stalkie_big_nohaplotig	exon	13320051	13321367	99	-	.	Parent=FBgn0030963.1.mrna1;Target=FBgn0030963.1 160 1476 +
Chr1	stalkie_big_nohaplotig	exon	13321421	13321579	100	-	.	Parent=FBgn0030963.1.mrna1;Target=FBgn0030963.1 1 159 +
Chr1	stalkie_big_nohaplotig	CDS	13320051	13321367	.	-	0	Parent=FBgn0030963.1.mrna1;Target=FBgn0030963.1 160 1476 +
Chr1	stalkie_big_nohaplotig	CDS	13321421	13321579	.	-	0	Parent=FBgn0030963.1.mrna1;Target=FBgn0030963.1 1 159 +
Chr1	gffcl	locus	13324057	13325064	.	+	.	ID=RLOC_00005879;geneIDs=comp154545_c0_seq1.path1;transcripts=comp154545_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13324057	13325064	.	+	.	ID=comp154545_c0_seq1.mrna1;geneID=comp154545_c0_seq1.path1;Name=comp154545_c0_seq1;Dir=indeterminatecoverage=99.9;identity=95.5;matches=964;mismatches=28;indels=17;unknowns=0;Target=comp154545_c0_seq1 993 1 .;CDS_Target=comp154545_c0_seq1 386 315 .;locus=RLOC_00005879
Chr1	stalkie_big_nohaplotig	exon	13324057	13325064	95	+	.	Parent=comp154545_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13324370	13324441	.	+	0	Parent=comp154545_c0_seq1.mrna1
Chr1	gffcl	locus	13325933	13328274	.	-	.	ID=RLOC_00005880;geneIDs=FBgn0036116.1.path1;transcripts=FBgn0036116.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13325933	13328274	.	-	.	ID=FBgn0036116.1.mrna1;geneID=FBgn0036116.1.path1;Name=FBgn0036116.1;Dir=sensecoverage=100.0;identity=99.6;matches=1417;mismatches=5;indels=0;unknowns=0;locus=RLOC_00005880
Chr1	stalkie_big_nohaplotig	exon	13325933	13326189	99	-	.	Parent=FBgn0036116.1.mrna1;Target=FBgn0036116.1 1166 1422 +
Chr1	stalkie_big_nohaplotig	exon	13326261	13326436	100	-	.	Parent=FBgn0036116.1.mrna1;Target=FBgn0036116.1 990 1165 +
Chr1	stalkie_big_nohaplotig	exon	13326503	13326873	99	-	.	Parent=FBgn0036116.1.mrna1;Target=FBgn0036116.1 619 989 +
Chr1	stalkie_big_nohaplotig	exon	13326945	13327199	99	-	.	Parent=FBgn0036116.1.mrna1;Target=FBgn0036116.1 364 618 +
Chr1	stalkie_big_nohaplotig	exon	13327281	13327363	98	-	.	Parent=FBgn0036116.1.mrna1;Target=FBgn0036116.1 281 363 +
Chr1	stalkie_big_nohaplotig	exon	13327941	13328044	100	-	.	Parent=FBgn0036116.1.mrna1;Target=FBgn0036116.1 177 280 +
Chr1	stalkie_big_nohaplotig	exon	13328099	13328274	99	-	.	Parent=FBgn0036116.1.mrna1;Target=FBgn0036116.1 1 176 +
Chr1	stalkie_big_nohaplotig	CDS	13325933	13326189	.	-	2	Parent=FBgn0036116.1.mrna1;Target=FBgn0036116.1 1166 1422 +
Chr1	stalkie_big_nohaplotig	CDS	13326261	13326436	.	-	1	Parent=FBgn0036116.1.mrna1;Target=FBgn0036116.1 990 1165 +
Chr1	stalkie_big_nohaplotig	CDS	13326503	13326873	.	-	0	Parent=FBgn0036116.1.mrna1;Target=FBgn0036116.1 619 989 +
Chr1	stalkie_big_nohaplotig	CDS	13326945	13327199	.	-	0	Parent=FBgn0036116.1.mrna1;Target=FBgn0036116.1 364 618 +
Chr1	stalkie_big_nohaplotig	CDS	13327281	13327363	.	-	2	Parent=FBgn0036116.1.mrna1;Target=FBgn0036116.1 281 363 +
Chr1	stalkie_big_nohaplotig	CDS	13327941	13328044	.	-	1	Parent=FBgn0036116.1.mrna1;Target=FBgn0036116.1 177 280 +
Chr1	stalkie_big_nohaplotig	CDS	13328099	13328274	.	-	0	Parent=FBgn0036116.1.mrna1;Target=FBgn0036116.1 1 176 +
Chr1	gffcl	locus	13351465	13397332	.	-	.	ID=RLOC_00005881;geneIDs=comp130836_c0_seq1.path1,comp143297_c0_seq1.path1,comp162375_c0_seq1.path1;transcripts=comp162375_c0_seq1.mrna1,comp130836_c0_seq1.mrna1,comp143297_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13351465	13397332	.	-	.	ID=comp162375_c0_seq1.mrna1;geneID=comp162375_c0_seq1.path1;Name=comp162375_c0_seq1;Dir=indeterminatecoverage=76.9;identity=96.7;matches=2617;mismatches=21;indels=67;unknowns=0;Target=comp162375_c0_seq1 728 531 .;locus=RLOC_00005881
Chr1	stalkie_big_nohaplotig	exon	13351465	13351472	100	-	.	Parent=comp162375_c0_seq1.mrna1;Target=comp162375_c0_seq1 2680 2673 .
Chr1	stalkie_big_nohaplotig	exon	13352258	13352259	100	-	.	Parent=comp162375_c0_seq1.mrna1;Target=comp162375_c0_seq1 2672 2671 .
Chr1	stalkie_big_nohaplotig	exon	13358912	13358915	100	-	.	Parent=comp162375_c0_seq1.mrna1;Target=comp162375_c0_seq1 2670 2667 .
Chr1	stalkie_big_nohaplotig	exon	13362503	13362508	100	-	.	Parent=comp162375_c0_seq1.mrna1;Target=comp162375_c0_seq1 2666 2661 .
Chr1	stalkie_big_nohaplotig	exon	13362925	13362929	100	-	.	Parent=comp162375_c0_seq1.mrna1;Target=comp162375_c0_seq1 2660 2656 .
Chr1	stalkie_big_nohaplotig	exon	13367352	13367373	54	-	.	Parent=comp162375_c0_seq1.mrna1;Target=comp162375_c0_seq1 2655 2625 .
Chr1	stalkie_big_nohaplotig	exon	13373889	13373900	100	-	.	Parent=comp162375_c0_seq1.mrna1;Target=comp162375_c0_seq1 2624 2613 .
Chr1	stalkie_big_nohaplotig	exon	13378351	13378354	100	-	.	Parent=comp162375_c0_seq1.mrna1;Target=comp162375_c0_seq1 2612 2609 .
Chr1	stalkie_big_nohaplotig	exon	13382822	13382859	50	-	.	Parent=comp162375_c0_seq1.mrna1;Target=comp162375_c0_seq1 2608 2540 .
Chr1	stalkie_big_nohaplotig	exon	13394014	13395513	97	-	.	Parent=comp162375_c0_seq1.mrna1;Target=comp162375_c0_seq1 2539 1064 .
Chr1	stalkie_big_nohaplotig	exon	13396271	13397332	99	-	.	Parent=comp162375_c0_seq1.mrna1;Target=comp162375_c0_seq1 1063 1 .
Chr1	stalkie_big_nohaplotig	CDS	13396606	13396803	.	-	0	Parent=comp162375_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13351680	13352587	.	-	.	ID=comp130836_c0_seq1.mrna1;geneID=comp130836_c0_seq1.path1;Name=comp130836_c0_seq1;Dir=antisensecoverage=100.0;identity=93.3;matches=798;mismatches=14;indels=43;unknowns=0;Target=comp130836_c0_seq1 518 745 .;locus=RLOC_00005881
Chr1	stalkie_big_nohaplotig	exon	13351680	13352142	89	-	.	Parent=comp130836_c0_seq1.mrna1;Target=comp130836_c0_seq1 1 432 -
Chr1	stalkie_big_nohaplotig	exon	13352204	13352587	97	-	.	Parent=comp130836_c0_seq1.mrna1;Target=comp130836_c0_seq1 433 820 -
Chr1	stalkie_big_nohaplotig	CDS	13352288	13352512	.	-	0	Parent=comp130836_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13361958	13362609	.	-	.	ID=comp143297_c0_seq1.mrna1;geneID=comp143297_c0_seq1.path1;Name=comp143297_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.5;matches=649;mismatches=3;indels=0;unknowns=0;Target=comp143297_c0_seq1 652 1 .;CDS_Target=comp143297_c0_seq1 651 532 .;locus=RLOC_00005881
Chr1	stalkie_big_nohaplotig	exon	13361958	13362609	99	-	.	Parent=comp143297_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13361959	13362078	.	-	0	Parent=comp143297_c0_seq1.mrna1
Chr1	gffcl	locus	13372914	13408796	.	.	.	ID=RLOC_00005882;geneIDs=FBgn0263776.1.path1,comp61797_c0_seq1.path1,comp78573_c0_seq1.path1,comp147434_c0_seq1.path1,comp155489_c0_seq1.path1;transcripts=FBgn0263776.1.mrna1,comp61797_c0_seq1.mrna1,comp78573_c0_seq1.mrna1,comp147434_c0_seq1.mrna1,comp155489_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13372914	13408796	.	+	.	ID=FBgn0263776.1.mrna1;geneID=FBgn0263776.1.path1;Name=FBgn0263776.1;Dir=sensecoverage=100.0;identity=95.7;matches=1450;mismatches=65;indels=0;unknowns=0;locus=RLOC_00005882
Chr1	stalkie_big_nohaplotig	exon	13372914	13372973	100	+	.	Parent=FBgn0263776.1.mrna1;Target=FBgn0263776.1 1 60 +
Chr1	stalkie_big_nohaplotig	exon	13392951	13393030	100	+	.	Parent=FBgn0263776.1.mrna1;Target=FBgn0263776.1 61 140 +
Chr1	stalkie_big_nohaplotig	exon	13393378	13393527	100	+	.	Parent=FBgn0263776.1.mrna1;Target=FBgn0263776.1 141 290 +
Chr1	stalkie_big_nohaplotig	exon	13398816	13399156	93	+	.	Parent=FBgn0263776.1.mrna1;Target=FBgn0263776.1 291 631 +
Chr1	stalkie_big_nohaplotig	exon	13407092	13407563	98	+	.	Parent=FBgn0263776.1.mrna1;Target=FBgn0263776.1 632 1103 +
Chr1	stalkie_big_nohaplotig	exon	13407627	13407786	88	+	.	Parent=FBgn0263776.1.mrna1;Target=FBgn0263776.1 1104 1263 +
Chr1	stalkie_big_nohaplotig	exon	13408545	13408796	93	+	.	Parent=FBgn0263776.1.mrna1;Target=FBgn0263776.1 1264 1515 +
Chr1	stalkie_big_nohaplotig	CDS	13372914	13372973	.	+	0	Parent=FBgn0263776.1.mrna1;Target=FBgn0263776.1 1 60 +
Chr1	stalkie_big_nohaplotig	CDS	13392951	13393030	.	+	0	Parent=FBgn0263776.1.mrna1;Target=FBgn0263776.1 61 140 +
Chr1	stalkie_big_nohaplotig	CDS	13393378	13393527	.	+	1	Parent=FBgn0263776.1.mrna1;Target=FBgn0263776.1 141 290 +
Chr1	stalkie_big_nohaplotig	CDS	13398816	13399156	.	+	1	Parent=FBgn0263776.1.mrna1;Target=FBgn0263776.1 291 631 +
Chr1	stalkie_big_nohaplotig	CDS	13407092	13407563	.	+	2	Parent=FBgn0263776.1.mrna1;Target=FBgn0263776.1 632 1103 +
Chr1	stalkie_big_nohaplotig	CDS	13407627	13407786	.	+	1	Parent=FBgn0263776.1.mrna1;Target=FBgn0263776.1 1104 1263 +
Chr1	stalkie_big_nohaplotig	CDS	13408545	13408796	.	+	0	Parent=FBgn0263776.1.mrna1;Target=FBgn0263776.1 1264 1515 +
Chr1	stalkie_big_nohaplotig	mRNA	13386273	13392974	.	+	.	ID=comp61797_c0_seq1.mrna1;geneID=comp61797_c0_seq1.path1;Name=comp61797_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=466;mismatches=1;indels=0;unknowns=0;Target=comp61797_c0_seq1 176 325 .;locus=RLOC_00005882
Chr1	stalkie_big_nohaplotig	exon	13386273	13386715	99	+	.	Parent=comp61797_c0_seq1.mrna1;Target=comp61797_c0_seq1 25 467 -
Chr1	stalkie_big_nohaplotig	exon	13392951	13392974	100	+	.	Parent=comp61797_c0_seq1.mrna1;Target=comp61797_c0_seq1 1 24 -
Chr1	stalkie_big_nohaplotig	CDS	13386415	13386564	.	+	0	Parent=comp61797_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13393008	13393391	.	+	.	ID=comp78573_c0_seq1.mrna1;geneID=comp78573_c0_seq1.path1;Name=comp78573_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=384;mismatches=0;indels=0;unknowns=0;Target=comp78573_c0_seq1 384 1 .;CDS_Target=comp78573_c0_seq1 383 306 .;locus=RLOC_00005882
Chr1	stalkie_big_nohaplotig	exon	13393008	13393391	100	+	.	Parent=comp78573_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13393313	13393390	.	+	0	Parent=comp78573_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13393505	13393921	.	-	.	ID=comp147434_c0_seq1.mrna1;geneID=comp147434_c0_seq1.path1;Name=comp147434_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=417;mismatches=0;indels=1;unknowns=0;Target=comp147434_c0_seq1 418 1 .;CDS_Target=comp147434_c0_seq1 108 1 .;locus=RLOC_00005882
Chr1	stalkie_big_nohaplotig	exon	13393505	13393921	99	-	.	Parent=comp147434_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13393814	13393921	.	-	0	Parent=comp147434_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13397878	13398839	.	+	.	ID=comp155489_c0_seq1.mrna1;geneID=comp155489_c0_seq1.path1;Name=comp155489_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=962;mismatches=0;indels=1;unknowns=0;Target=comp155489_c0_seq1 963 1 .;CDS_Target=comp155489_c0_seq1 552 499 .;locus=RLOC_00005882
Chr1	stalkie_big_nohaplotig	exon	13397878	13398839	99	+	.	Parent=comp155489_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13398376	13398428	.	+	0	Parent=comp155489_c0_seq1.mrna1
Chr1	gffcl	locus	13476433	13476748	.	+	.	ID=RLOC_00005883;geneIDs=comp118864_c1_seq1.path1;transcripts=comp118864_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13476433	13476748	.	+	.	ID=comp118864_c1_seq1.mrna1;geneID=comp118864_c1_seq1.path1;Name=comp118864_c1_seq1;Dir=indeterminatecoverage=89.3;identity=99.7;matches=315;mismatches=1;indels=0;unknowns=0;Target=comp118864_c1_seq1 316 1 .;CDS_Target=comp118864_c1_seq1 70 2 .;locus=RLOC_00005883
Chr1	stalkie_big_nohaplotig	exon	13476433	13476748	99	+	.	Parent=comp118864_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13476434	13476502	.	+	0	Parent=comp118864_c1_seq1.mrna1
Chr1	gffcl	locus	13702621	13712494	.	-	.	ID=RLOC_00005885;geneIDs=FBgn0035179.1.path1,comp161324_c0_seq1.path1;transcripts=comp161324_c0_seq1.mrna1,FBgn0035179.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13702621	13712494	.	-	.	ID=comp161324_c0_seq1.mrna1;geneID=comp161324_c0_seq1.path1;Name=comp161324_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=6379;mismatches=22;indels=18;unknowns=0;locus=RLOC_00005885
Chr1	stalkie_big_nohaplotig	exon	13702621	13704059	100	-	.	Parent=comp161324_c0_seq1.mrna1;Target=comp161324_c0_seq1 6420 4982 .
Chr1	stalkie_big_nohaplotig	exon	13707115	13707213	100	-	.	Parent=comp161324_c0_seq1.mrna1;Target=comp161324_c0_seq1 4981 4883 .
Chr1	stalkie_big_nohaplotig	exon	13707300	13707455	100	-	.	Parent=comp161324_c0_seq1.mrna1;Target=comp161324_c0_seq1 4882 4727 .
Chr1	stalkie_big_nohaplotig	exon	13707522	13710984	98	-	.	Parent=comp161324_c0_seq1.mrna1;Target=comp161324_c0_seq1 4726 1246 .
Chr1	stalkie_big_nohaplotig	exon	13711042	13711449	100	-	.	Parent=comp161324_c0_seq1.mrna1;Target=comp161324_c0_seq1 1245 838 .
Chr1	stalkie_big_nohaplotig	exon	13711507	13711644	100	-	.	Parent=comp161324_c0_seq1.mrna1;Target=comp161324_c0_seq1 837 700 .
Chr1	stalkie_big_nohaplotig	exon	13711724	13711873	100	-	.	Parent=comp161324_c0_seq1.mrna1;Target=comp161324_c0_seq1 699 550 .
Chr1	stalkie_big_nohaplotig	exon	13711947	13712494	99	-	.	Parent=comp161324_c0_seq1.mrna1;Target=comp161324_c0_seq1 549 2 .
Chr1	stalkie_big_nohaplotig	CDS	13711237	13711449	.	-	0	Parent=comp161324_c0_seq1.mrna1;Target=comp161324_c0_seq1 1050 838 .
Chr1	stalkie_big_nohaplotig	CDS	13711507	13711644	.	-	0	Parent=comp161324_c0_seq1.mrna1;Target=comp161324_c0_seq1 837 700 .
Chr1	stalkie_big_nohaplotig	CDS	13711724	13711873	.	-	0	Parent=comp161324_c0_seq1.mrna1;Target=comp161324_c0_seq1 699 550 .
Chr1	stalkie_big_nohaplotig	CDS	13711947	13712096	.	-	0	Parent=comp161324_c0_seq1.mrna1;Target=comp161324_c0_seq1 549 400 .
Chr1	stalkie_big_nohaplotig	mRNA	13710591	13712114	.	-	.	ID=FBgn0035179.1.mrna1;geneID=FBgn0035179.1.path1;Name=FBgn0035179.1;Dir=sensecoverage=100.0;identity=100.0;matches=1197;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005885
Chr1	stalkie_big_nohaplotig	exon	13710591	13710984	100	-	.	Parent=FBgn0035179.1.mrna1;Target=FBgn0035179.1 804 1197 +
Chr1	stalkie_big_nohaplotig	exon	13711042	13711179	100	-	.	Parent=FBgn0035179.1.mrna1;Target=FBgn0035179.1 666 803 +
Chr1	stalkie_big_nohaplotig	exon	13711241	13711449	100	-	.	Parent=FBgn0035179.1.mrna1;Target=FBgn0035179.1 457 665 +
Chr1	stalkie_big_nohaplotig	exon	13711507	13711644	100	-	.	Parent=FBgn0035179.1.mrna1;Target=FBgn0035179.1 319 456 +
Chr1	stalkie_big_nohaplotig	exon	13711724	13711873	100	-	.	Parent=FBgn0035179.1.mrna1;Target=FBgn0035179.1 169 318 +
Chr1	stalkie_big_nohaplotig	exon	13711947	13712114	100	-	.	Parent=FBgn0035179.1.mrna1;Target=FBgn0035179.1 1 168 +
Chr1	stalkie_big_nohaplotig	CDS	13710591	13710984	.	-	1	Parent=FBgn0035179.1.mrna1;Target=FBgn0035179.1 804 1197 +
Chr1	stalkie_big_nohaplotig	CDS	13711042	13711179	.	-	1	Parent=FBgn0035179.1.mrna1;Target=FBgn0035179.1 666 803 +
Chr1	stalkie_big_nohaplotig	CDS	13711241	13711449	.	-	0	Parent=FBgn0035179.1.mrna1;Target=FBgn0035179.1 457 665 +
Chr1	stalkie_big_nohaplotig	CDS	13711507	13711644	.	-	0	Parent=FBgn0035179.1.mrna1;Target=FBgn0035179.1 319 456 +
Chr1	stalkie_big_nohaplotig	CDS	13711724	13711873	.	-	0	Parent=FBgn0035179.1.mrna1;Target=FBgn0035179.1 169 318 +
Chr1	stalkie_big_nohaplotig	CDS	13711947	13712114	.	-	0	Parent=FBgn0035179.1.mrna1;Target=FBgn0035179.1 1 168 +
Chr1	gffcl	locus	13704015	13707767	.	+	.	ID=RLOC_00005886;geneIDs=FBgn0036111.1.path1;transcripts=FBgn0036111.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13704015	13707767	.	+	.	ID=FBgn0036111.1.mrna1;geneID=FBgn0036111.1.path1;Name=FBgn0036111.1;Dir=sensecoverage=100.0;identity=100.0;matches=546;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005886
Chr1	stalkie_big_nohaplotig	exon	13704015	13704059	100	+	.	Parent=FBgn0036111.1.mrna1;Target=FBgn0036111.1 1 45 +
Chr1	stalkie_big_nohaplotig	exon	13707115	13707213	100	+	.	Parent=FBgn0036111.1.mrna1;Target=FBgn0036111.1 46 144 +
Chr1	stalkie_big_nohaplotig	exon	13707300	13707455	100	+	.	Parent=FBgn0036111.1.mrna1;Target=FBgn0036111.1 145 300 +
Chr1	stalkie_big_nohaplotig	exon	13707522	13707767	100	+	.	Parent=FBgn0036111.1.mrna1;Target=FBgn0036111.1 301 546 +
Chr1	stalkie_big_nohaplotig	CDS	13704015	13704059	.	+	0	Parent=FBgn0036111.1.mrna1;Target=FBgn0036111.1 1 45 +
Chr1	stalkie_big_nohaplotig	CDS	13707115	13707213	.	+	0	Parent=FBgn0036111.1.mrna1;Target=FBgn0036111.1 46 144 +
Chr1	stalkie_big_nohaplotig	CDS	13707300	13707455	.	+	0	Parent=FBgn0036111.1.mrna1;Target=FBgn0036111.1 145 300 +
Chr1	stalkie_big_nohaplotig	CDS	13707522	13707767	.	+	0	Parent=FBgn0036111.1.mrna1;Target=FBgn0036111.1 301 546 +
Chr1	gffcl	locus	13705230	13706683	.	+	.	ID=RLOC_00005887;geneIDs=comp144605_c0_seq1.path1;transcripts=comp144605_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13705230	13706683	.	+	.	ID=comp144605_c0_seq1.mrna1;geneID=comp144605_c0_seq1.path1;Name=comp144605_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.7;matches=1450;mismatches=4;indels=0;unknowns=0;Target=comp144605_c0_seq1 1454 1 .;CDS_Target=comp144605_c0_seq1 1316 1176 .;locus=RLOC_00005887
Chr1	stalkie_big_nohaplotig	exon	13705230	13706683	99	+	.	Parent=comp144605_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13706405	13706545	.	+	0	Parent=comp144605_c0_seq1.mrna1
Chr1	gffcl	locus	13713791	13714474	.	-	.	ID=RLOC_00005888;geneIDs=comp116872_c0_seq1.path1,comp187573_c0_seq1.path1;transcripts=comp116872_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13714080	13714474	.	-	.	ID=comp116872_c0_seq1.mrna1;geneID=comp116872_c0_seq1.path1;Name=comp116872_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=386;mismatches=2;indels=11;unknowns=0;Target=comp116872_c0_seq1 392 1 .;CDS_Target=comp116872_c0_seq1 140 3 .;locus=RLOC_00005888
Chr1	stalkie_big_nohaplotig	exon	13714080	13714474	96	-	.	Parent=comp116872_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13714335	13714472	.	-	0	Parent=comp116872_c0_seq1.mrna1
Chr1	gffcl	locus	13715410	13715654	.	-	.	ID=RLOC_00005889;geneIDs=comp144028_c0_seq1.path1;transcripts=comp144028_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13715410	13715654	.	-	.	ID=comp144028_c0_seq1.mrna1;geneID=comp144028_c0_seq1.path1;Name=comp144028_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=244;mismatches=1;indels=0;unknowns=0;Target=comp144028_c0_seq1 245 1 .;CDS_Target=comp144028_c0_seq1 114 46 .;locus=RLOC_00005889
Chr1	stalkie_big_nohaplotig	exon	13715410	13715654	99	-	.	Parent=comp144028_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13715541	13715609	.	-	0	Parent=comp144028_c0_seq1.mrna1
Chr1	gffcl	locus	13715841	13716705	.	-	.	ID=RLOC_00005890;geneIDs=comp159164_c0_seq1.path1;transcripts=comp159164_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13715841	13716705	.	-	.	ID=comp159164_c0_seq1.mrna1;geneID=comp159164_c0_seq1.path1;Name=comp159164_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=861;mismatches=4;indels=0;unknowns=0;Target=comp159164_c0_seq1 865 1 .;CDS_Target=comp159164_c0_seq1 596 459 .;locus=RLOC_00005890
Chr1	stalkie_big_nohaplotig	exon	13715841	13716705	99	-	.	Parent=comp159164_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13716110	13716247	.	-	0	Parent=comp159164_c0_seq1.mrna1
Chr1	gffcl	locus	13717422	13717815	.	-	.	ID=RLOC_00005891;geneIDs=comp154607_c0_seq1.path1;transcripts=comp154607_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13717422	13717815	.	-	.	ID=comp154607_c0_seq1.mrna1;geneID=comp154607_c0_seq1.path1;Name=comp154607_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=390;mismatches=4;indels=0;unknowns=0;Target=comp154607_c0_seq1 394 1 .;CDS_Target=comp154607_c0_seq1 47 3 .;locus=RLOC_00005891
Chr1	stalkie_big_nohaplotig	exon	13717422	13717815	98	-	.	Parent=comp154607_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13717769	13717813	.	-	0	Parent=comp154607_c0_seq1.mrna1
Chr1	gffcl	locus	13731566	13793758	.	-	.	ID=RLOC_00005893;geneIDs=FBgn0261914.1.path1,comp67716_c0_seq1.path1,comp155199_c0_seq1.path1;transcripts=comp155199_c0_seq1.mrna1,FBgn0261914.1.mrna1,comp67716_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13731566	13793758	.	-	.	ID=comp155199_c0_seq1.mrna1;geneID=comp155199_c0_seq1.path1;Name=comp155199_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=2522;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005893
Chr1	stalkie_big_nohaplotig	exon	13731566	13731930	100	-	.	Parent=comp155199_c0_seq1.mrna1;Target=comp155199_c0_seq1 2159 2523 +
Chr1	stalkie_big_nohaplotig	exon	13734893	13735032	100	-	.	Parent=comp155199_c0_seq1.mrna1;Target=comp155199_c0_seq1 2019 2158 +
Chr1	stalkie_big_nohaplotig	exon	13735103	13735327	100	-	.	Parent=comp155199_c0_seq1.mrna1;Target=comp155199_c0_seq1 1794 2018 +
Chr1	stalkie_big_nohaplotig	exon	13739718	13739840	100	-	.	Parent=comp155199_c0_seq1.mrna1;Target=comp155199_c0_seq1 1671 1793 +
Chr1	stalkie_big_nohaplotig	exon	13739906	13740183	100	-	.	Parent=comp155199_c0_seq1.mrna1;Target=comp155199_c0_seq1 1393 1670 +
Chr1	stalkie_big_nohaplotig	exon	13740252	13740530	99	-	.	Parent=comp155199_c0_seq1.mrna1;Target=comp155199_c0_seq1 1114 1392 +
Chr1	stalkie_big_nohaplotig	exon	13741094	13741218	100	-	.	Parent=comp155199_c0_seq1.mrna1;Target=comp155199_c0_seq1 989 1113 +
Chr1	stalkie_big_nohaplotig	exon	13741289	13741545	100	-	.	Parent=comp155199_c0_seq1.mrna1;Target=comp155199_c0_seq1 732 988 +
Chr1	stalkie_big_nohaplotig	exon	13781705	13782112	100	-	.	Parent=comp155199_c0_seq1.mrna1;Target=comp155199_c0_seq1 324 731 +
Chr1	stalkie_big_nohaplotig	exon	13792881	13792970	100	-	.	Parent=comp155199_c0_seq1.mrna1;Target=comp155199_c0_seq1 234 323 +
Chr1	stalkie_big_nohaplotig	exon	13793526	13793758	100	-	.	Parent=comp155199_c0_seq1.mrna1;Target=comp155199_c0_seq1 1 233 +
Chr1	stalkie_big_nohaplotig	CDS	13731924	13731930	.	-	1	Parent=comp155199_c0_seq1.mrna1;Target=comp155199_c0_seq1 2159 2165 +
Chr1	stalkie_big_nohaplotig	CDS	13734893	13735032	.	-	0	Parent=comp155199_c0_seq1.mrna1;Target=comp155199_c0_seq1 2019 2158 +
Chr1	stalkie_big_nohaplotig	CDS	13735103	13735327	.	-	0	Parent=comp155199_c0_seq1.mrna1;Target=comp155199_c0_seq1 1794 2018 +
Chr1	stalkie_big_nohaplotig	CDS	13739718	13739840	.	-	0	Parent=comp155199_c0_seq1.mrna1;Target=comp155199_c0_seq1 1671 1793 +
Chr1	stalkie_big_nohaplotig	CDS	13739906	13740183	.	-	2	Parent=comp155199_c0_seq1.mrna1;Target=comp155199_c0_seq1 1393 1670 +
Chr1	stalkie_big_nohaplotig	CDS	13740252	13740530	.	-	2	Parent=comp155199_c0_seq1.mrna1;Target=comp155199_c0_seq1 1114 1392 +
Chr1	stalkie_big_nohaplotig	CDS	13741094	13741218	.	-	1	Parent=comp155199_c0_seq1.mrna1;Target=comp155199_c0_seq1 989 1113 +
Chr1	stalkie_big_nohaplotig	CDS	13741289	13741545	.	-	0	Parent=comp155199_c0_seq1.mrna1;Target=comp155199_c0_seq1 732 988 +
Chr1	stalkie_big_nohaplotig	CDS	13781705	13781725	.	-	0	Parent=comp155199_c0_seq1.mrna1;Target=comp155199_c0_seq1 711 731 +
Chr1	stalkie_big_nohaplotig	mRNA	13732146	13741555	.	-	.	ID=FBgn0261914.1.mrna1;geneID=FBgn0261914.1.path1;Name=FBgn0261914.1;Dir=sensecoverage=95.5;identity=99.1;matches=1618;mismatches=6;indels=9;unknowns=0;locus=RLOC_00005893
Chr1	stalkie_big_nohaplotig	exon	13732146	13732332	93	-	.	Parent=FBgn0261914.1.mrna1;Target=FBgn0261914.1 1515 1710 +
Chr1	stalkie_big_nohaplotig	exon	13734893	13735032	100	-	.	Parent=FBgn0261914.1.mrna1;Target=FBgn0261914.1 1375 1514 +
Chr1	stalkie_big_nohaplotig	exon	13735103	13735327	100	-	.	Parent=FBgn0261914.1.mrna1;Target=FBgn0261914.1 1150 1374 +
Chr1	stalkie_big_nohaplotig	exon	13739718	13739840	100	-	.	Parent=FBgn0261914.1.mrna1;Target=FBgn0261914.1 1027 1149 +
Chr1	stalkie_big_nohaplotig	exon	13739906	13740183	100	-	.	Parent=FBgn0261914.1.mrna1;Target=FBgn0261914.1 749 1026 +
Chr1	stalkie_big_nohaplotig	exon	13740252	13740530	99	-	.	Parent=FBgn0261914.1.mrna1;Target=FBgn0261914.1 470 748 +
Chr1	stalkie_big_nohaplotig	exon	13741094	13741218	100	-	.	Parent=FBgn0261914.1.mrna1;Target=FBgn0261914.1 345 469 +
Chr1	stalkie_big_nohaplotig	exon	13741289	13741555	99	-	.	Parent=FBgn0261914.1.mrna1;Target=FBgn0261914.1 78 344 +
Chr1	stalkie_big_nohaplotig	CDS	13732146	13732332	.	-	1	Parent=FBgn0261914.1.mrna1;Target=FBgn0261914.1 1515 1710 +
Chr1	stalkie_big_nohaplotig	CDS	13734893	13735032	.	-	0	Parent=FBgn0261914.1.mrna1;Target=FBgn0261914.1 1375 1514 +
Chr1	stalkie_big_nohaplotig	CDS	13735103	13735327	.	-	0	Parent=FBgn0261914.1.mrna1;Target=FBgn0261914.1 1150 1374 +
Chr1	stalkie_big_nohaplotig	CDS	13739718	13739840	.	-	0	Parent=FBgn0261914.1.mrna1;Target=FBgn0261914.1 1027 1149 +
Chr1	stalkie_big_nohaplotig	CDS	13739906	13740183	.	-	2	Parent=FBgn0261914.1.mrna1;Target=FBgn0261914.1 749 1026 +
Chr1	stalkie_big_nohaplotig	CDS	13740252	13740530	.	-	2	Parent=FBgn0261914.1.mrna1;Target=FBgn0261914.1 470 748 +
Chr1	stalkie_big_nohaplotig	CDS	13741094	13741218	.	-	1	Parent=FBgn0261914.1.mrna1;Target=FBgn0261914.1 345 469 +
Chr1	stalkie_big_nohaplotig	CDS	13741289	13741554	.	-	0	Parent=FBgn0261914.1.mrna1;Target=FBgn0261914.1 79 344 +
Chr1	stalkie_big_nohaplotig	mRNA	13793027	13793559	.	-	.	ID=comp67716_c0_seq1.mrna1;geneID=comp67716_c0_seq1.path1;Name=comp67716_c0_seq1;Dir=indeterminatecoverage=97.8;identity=99.4;matches=531;mismatches=2;indels=1;unknowns=0;Target=comp67716_c0_seq1 534 1 .;CDS_Target=comp67716_c0_seq1 214 158 .;locus=RLOC_00005893
Chr1	stalkie_big_nohaplotig	exon	13793027	13793559	99	-	.	Parent=comp67716_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13793346	13793402	.	-	0	Parent=comp67716_c0_seq1.mrna1
Chr1	gffcl	locus	13735686	13736784	.	+	.	ID=RLOC_00005894;geneIDs=comp154331_c1_seq1.path1;transcripts=comp154331_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13735686	13736784	.	+	.	ID=comp154331_c1_seq1.mrna1;geneID=comp154331_c1_seq1.path1;Name=comp154331_c1_seq1;Dir=indeterminatecoverage=97.1;identity=99.7;matches=1096;mismatches=3;indels=0;unknowns=0;Target=comp154331_c1_seq1 1099 1 .;CDS_Target=comp154331_c1_seq1 721 584 .;locus=RLOC_00005894
Chr1	stalkie_big_nohaplotig	exon	13735686	13736784	99	+	.	Parent=comp154331_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13736269	13736406	.	+	0	Parent=comp154331_c1_seq1.mrna1
Chr1	gffcl	locus	13737025	13739184	.	-	.	ID=RLOC_00005895;geneIDs=comp161765_c1_seq1.path1;transcripts=comp161765_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13737025	13739184	.	-	.	ID=comp161765_c1_seq1.mrna1;geneID=comp161765_c1_seq1.path1;Name=comp161765_c1_seq1;Dir=indeterminatecoverage=97.6;identity=97.6;matches=2114;mismatches=35;indels=16;unknowns=0;Target=comp161765_c1_seq1 2208 55 .;CDS_Target=comp161765_c1_seq1 922 911 .;locus=RLOC_00005895
Chr1	stalkie_big_nohaplotig	exon	13737025	13739184	97	-	.	Parent=comp161765_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13738322	13738331	.	-	0	Parent=comp161765_c1_seq1.mrna1
Chr1	gffcl	locus	13761248	13763551	.	+	.	ID=RLOC_00005896;geneIDs=FBgn0030004.1.path1;transcripts=FBgn0030004.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13761248	13763551	.	+	.	ID=FBgn0030004.1.mrna1;geneID=FBgn0030004.1.path1;Name=FBgn0030004.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=2297;mismatches=7;indels=12;unknowns=0;Target=FBgn0030004.1 2316 1 .;locus=RLOC_00005896
Chr1	stalkie_big_nohaplotig	exon	13761248	13763551	99	+	.	Parent=FBgn0030004.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13761248	13763551	.	+	0	Parent=FBgn0030004.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14048911	14069003	.	-	.	ID=FBgn0010905.1.mrna1;geneID=FBgn0010905.1.path1;Name=FBgn0010905.1;Dir=sensecoverage=100.0;identity=99.6;matches=5028;mismatches=16;indels=2;unknowns=0;Target=FBgn0010905.1 3 68 +;locus=RLOC_00005897
Chr1	stalkie_big_nohaplotig	exon	14048911	14049209	99	-	.	Parent=FBgn0010905.1.mrna1;Target=FBgn0010905.1 4747 5046 +
Chr1	stalkie_big_nohaplotig	exon	14050040	14050278	99	-	.	Parent=FBgn0010905.1.mrna1;Target=FBgn0010905.1 4508 4746 +
Chr1	stalkie_big_nohaplotig	exon	14050434	14050570	100	-	.	Parent=FBgn0010905.1.mrna1;Target=FBgn0010905.1 4371 4507 +
Chr1	stalkie_big_nohaplotig	exon	14050639	14051314	99	-	.	Parent=FBgn0010905.1.mrna1;Target=FBgn0010905.1 3695 4370 +
Chr1	stalkie_big_nohaplotig	exon	14053449	14054049	99	-	.	Parent=FBgn0010905.1.mrna1;Target=FBgn0010905.1 3094 3694 +
Chr1	stalkie_big_nohaplotig	exon	14054147	14054200	100	-	.	Parent=FBgn0010905.1.mrna1;Target=FBgn0010905.1 3040 3093 +
Chr1	stalkie_big_nohaplotig	exon	14054601	14054784	100	-	.	Parent=FBgn0010905.1.mrna1;Target=FBgn0010905.1 2856 3039 +
Chr1	stalkie_big_nohaplotig	exon	14054851	14055050	100	-	.	Parent=FBgn0010905.1.mrna1;Target=FBgn0010905.1 2656 2855 +
Chr1	stalkie_big_nohaplotig	exon	14055619	14055971	99	-	.	Parent=FBgn0010905.1.mrna1;Target=FBgn0010905.1 2303 2655 +
Chr1	stalkie_big_nohaplotig	exon	14056032	14056900	99	-	.	Parent=FBgn0010905.1.mrna1;Target=FBgn0010905.1 1434 2302 +
Chr1	stalkie_big_nohaplotig	exon	14059415	14060357	99	-	.	Parent=FBgn0010905.1.mrna1;Target=FBgn0010905.1 491 1433 +
Chr1	stalkie_big_nohaplotig	exon	14068456	14068578	100	-	.	Parent=FBgn0010905.1.mrna1;Target=FBgn0010905.1 368 490 +
Chr1	stalkie_big_nohaplotig	exon	14068638	14069003	99	-	.	Parent=FBgn0010905.1.mrna1;Target=FBgn0010905.1 1 367 +
Chr1	stalkie_big_nohaplotig	CDS	14068937	14069001	.	-	0	Parent=FBgn0010905.1.mrna1
Chr1	gffcl	locus	13885716	13887302	.	-	.	ID=RLOC_00005898;geneIDs=FBgn0028999.1.path1;transcripts=FBgn0028999.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13885716	13887302	.	-	.	ID=FBgn0028999.1.mrna1;geneID=FBgn0028999.1.path1;Name=FBgn0028999.1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1581;mismatches=3;indels=12;unknowns=0;Target=FBgn0028999.1 1593 1 .;locus=RLOC_00005898
Chr1	stalkie_big_nohaplotig	exon	13885716	13887302	99	-	.	Parent=FBgn0028999.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13885716	13887302	.	-	0	Parent=FBgn0028999.1.mrna1
Chr1	gffcl	locus	13895286	13895368	.	-	.	ID=RLOC_00005899;geneIDs=comp150283_c0_seq1.path1;transcripts=comp150283_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13895286	13895368	.	-	.	ID=comp150283_c0_seq1.mrna1;geneID=comp150283_c0_seq1.path1;Name=comp150283_c0_seq1;Dir=indeterminatecoverage=8.2;identity=98.8;matches=82;mismatches=1;indels=0;unknowns=0;Target=comp150283_c0_seq1 83 1 .;locus=RLOC_00005899
Chr1	stalkie_big_nohaplotig	exon	13895286	13895368	98	-	.	Parent=comp150283_c0_seq1.mrna1
Chr1	gffcl	locus	13905089	13907798	.	-	.	ID=RLOC_00005900;geneIDs=FBgn0032078.3.path1;transcripts=FBgn0032078.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13905089	13907798	.	-	.	ID=FBgn0032078.3.mrna1;geneID=FBgn0032078.3.path1;Name=FBgn0032078.3;Dir=sensecoverage=100.0;identity=99.9;matches=1025;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005900
Chr1	stalkie_big_nohaplotig	exon	13905089	13905286	100	-	.	Parent=FBgn0032078.3.mrna1;Target=FBgn0032078.3 829 1026 +
Chr1	stalkie_big_nohaplotig	exon	13905343	13905615	100	-	.	Parent=FBgn0032078.3.mrna1;Target=FBgn0032078.3 556 828 +
Chr1	stalkie_big_nohaplotig	exon	13905866	13905962	100	-	.	Parent=FBgn0032078.3.mrna1;Target=FBgn0032078.3 459 555 +
Chr1	stalkie_big_nohaplotig	exon	13907341	13907798	99	-	.	Parent=FBgn0032078.3.mrna1;Target=FBgn0032078.3 1 458 +
Chr1	stalkie_big_nohaplotig	CDS	13905089	13905286	.	-	0	Parent=FBgn0032078.3.mrna1;Target=FBgn0032078.3 829 1026 +
Chr1	stalkie_big_nohaplotig	CDS	13905343	13905615	.	-	0	Parent=FBgn0032078.3.mrna1;Target=FBgn0032078.3 556 828 +
Chr1	stalkie_big_nohaplotig	CDS	13905866	13905962	.	-	1	Parent=FBgn0032078.3.mrna1;Target=FBgn0032078.3 459 555 +
Chr1	stalkie_big_nohaplotig	CDS	13907341	13907798	.	-	0	Parent=FBgn0032078.3.mrna1;Target=FBgn0032078.3 1 458 +
Chr1	gffcl	locus	13931753	13932927	.	+	.	ID=RLOC_00005901;geneIDs=comp147536_c0_seq1.path1;transcripts=comp147536_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13931753	13932927	.	+	.	ID=comp147536_c0_seq1.mrna1;geneID=comp147536_c0_seq1.path1;Name=comp147536_c0_seq1;Dir=sensecoverage=100.0;identity=99.1;matches=913;mismatches=7;indels=1;unknowns=0;Target=comp147536_c0_seq1 713 778 +;locus=RLOC_00005901
Chr1	stalkie_big_nohaplotig	exon	13931753	13932028	99	+	.	Parent=comp147536_c0_seq1.mrna1;Target=comp147536_c0_seq1 1 276 +
Chr1	stalkie_big_nohaplotig	exon	13932168	13932604	98	+	.	Parent=comp147536_c0_seq1.mrna1;Target=comp147536_c0_seq1 277 712 +
Chr1	stalkie_big_nohaplotig	exon	13932720	13932927	99	+	.	Parent=comp147536_c0_seq1.mrna1;Target=comp147536_c0_seq1 713 920 +
Chr1	stalkie_big_nohaplotig	CDS	13932720	13932785	.	+	0	Parent=comp147536_c0_seq1.mrna1
Chr1	gffcl	locus	13939898	13942285	.	+	.	ID=RLOC_00005902;geneIDs=FBgn0035173.1.path1;transcripts=FBgn0035173.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13939898	13942285	.	+	.	ID=FBgn0035173.1.mrna1;geneID=FBgn0035173.1.path1;Name=FBgn0035173.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=2384;mismatches=4;indels=0;unknowns=0;Target=FBgn0035173.1 2388 1 .;locus=RLOC_00005902
Chr1	stalkie_big_nohaplotig	exon	13939898	13942285	99	+	.	Parent=FBgn0035173.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13939898	13942285	.	+	0	Parent=FBgn0035173.1.mrna1
Chr1	gffcl	locus	13954964	13955430	.	-	.	ID=RLOC_00005903;geneIDs=comp149457_c0_seq1.path1;transcripts=comp149457_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13954964	13955430	.	-	.	ID=comp149457_c0_seq1.mrna1;geneID=comp149457_c0_seq1.path1;Name=comp149457_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.6;matches=456;mismatches=9;indels=2;unknowns=0;Target=comp149457_c0_seq1 465 1 .;CDS_Target=comp149457_c0_seq1 359 189 .;locus=RLOC_00005903
Chr1	stalkie_big_nohaplotig	exon	13954964	13955430	97	-	.	Parent=comp149457_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13955072	13955242	.	-	0	Parent=comp149457_c0_seq1.mrna1
Chr1	gffcl	locus	13957444	13962488	.	+	.	ID=RLOC_00005904;geneIDs=FBgn0036571.1.path1;transcripts=FBgn0036571.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13957444	13962488	.	+	.	ID=FBgn0036571.1.mrna1;geneID=FBgn0036571.1.path1;Name=FBgn0036571.1;Dir=sensecoverage=100.0;identity=99.7;matches=3597;mismatches=12;indels=0;unknowns=0;locus=RLOC_00005904
Chr1	stalkie_big_nohaplotig	exon	13957444	13957637	100	+	.	Parent=FBgn0036571.1.mrna1;Target=FBgn0036571.1 1 194 +
Chr1	stalkie_big_nohaplotig	exon	13957696	13957798	100	+	.	Parent=FBgn0036571.1.mrna1;Target=FBgn0036571.1 195 297 +
Chr1	stalkie_big_nohaplotig	exon	13957861	13958052	100	+	.	Parent=FBgn0036571.1.mrna1;Target=FBgn0036571.1 298 489 +
Chr1	stalkie_big_nohaplotig	exon	13958113	13959327	99	+	.	Parent=FBgn0036571.1.mrna1;Target=FBgn0036571.1 490 1704 +
Chr1	stalkie_big_nohaplotig	exon	13959411	13960780	99	+	.	Parent=FBgn0036571.1.mrna1;Target=FBgn0036571.1 1705 3074 +
Chr1	stalkie_big_nohaplotig	exon	13960853	13961233	99	+	.	Parent=FBgn0036571.1.mrna1;Target=FBgn0036571.1 3075 3455 +
Chr1	stalkie_big_nohaplotig	exon	13962335	13962488	100	+	.	Parent=FBgn0036571.1.mrna1;Target=FBgn0036571.1 3456 3609 +
Chr1	stalkie_big_nohaplotig	CDS	13957444	13957637	.	+	0	Parent=FBgn0036571.1.mrna1;Target=FBgn0036571.1 1 194 +
Chr1	stalkie_big_nohaplotig	CDS	13957696	13957798	.	+	1	Parent=FBgn0036571.1.mrna1;Target=FBgn0036571.1 195 297 +
Chr1	stalkie_big_nohaplotig	CDS	13957861	13958052	.	+	0	Parent=FBgn0036571.1.mrna1;Target=FBgn0036571.1 298 489 +
Chr1	stalkie_big_nohaplotig	CDS	13958113	13959327	.	+	0	Parent=FBgn0036571.1.mrna1;Target=FBgn0036571.1 490 1704 +
Chr1	stalkie_big_nohaplotig	CDS	13959411	13960780	.	+	0	Parent=FBgn0036571.1.mrna1;Target=FBgn0036571.1 1705 3074 +
Chr1	stalkie_big_nohaplotig	CDS	13960853	13961233	.	+	1	Parent=FBgn0036571.1.mrna1;Target=FBgn0036571.1 3075 3455 +
Chr1	stalkie_big_nohaplotig	CDS	13962335	13962488	.	+	1	Parent=FBgn0036571.1.mrna1;Target=FBgn0036571.1 3456 3609 +
Chr1	gffcl	locus	13962709	13965027	.	.	.	ID=RLOC_00005905;geneIDs=FBgn0003076.1.path1,comp149496_c0_seq1.path1;transcripts=FBgn0003076.1.mrna1,comp149496_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13962709	13965027	.	-	.	ID=FBgn0003076.1.mrna1;geneID=FBgn0003076.1.path1;Name=FBgn0003076.1;Dir=sensecoverage=99.2;identity=99.9;matches=1683;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005905
Chr1	stalkie_big_nohaplotig	exon	13962709	13962844	100	-	.	Parent=FBgn0003076.1.mrna1;Target=FBgn0003076.1 1563 1698 +
Chr1	stalkie_big_nohaplotig	exon	13962914	13963584	99	-	.	Parent=FBgn0003076.1.mrna1;Target=FBgn0003076.1 892 1562 +
Chr1	stalkie_big_nohaplotig	exon	13963645	13964192	100	-	.	Parent=FBgn0003076.1.mrna1;Target=FBgn0003076.1 344 891 +
Chr1	stalkie_big_nohaplotig	exon	13964568	13964649	100	-	.	Parent=FBgn0003076.1.mrna1;Target=FBgn0003076.1 262 343 +
Chr1	stalkie_big_nohaplotig	exon	13964707	13964871	100	-	.	Parent=FBgn0003076.1.mrna1;Target=FBgn0003076.1 97 261 +
Chr1	stalkie_big_nohaplotig	exon	13964945	13965027	98	-	.	Parent=FBgn0003076.1.mrna1;Target=FBgn0003076.1 14 96 +
Chr1	stalkie_big_nohaplotig	CDS	13962709	13962844	.	-	1	Parent=FBgn0003076.1.mrna1;Target=FBgn0003076.1 1563 1698 +
Chr1	stalkie_big_nohaplotig	CDS	13962914	13963584	.	-	0	Parent=FBgn0003076.1.mrna1;Target=FBgn0003076.1 892 1562 +
Chr1	stalkie_big_nohaplotig	CDS	13963645	13964192	.	-	2	Parent=FBgn0003076.1.mrna1;Target=FBgn0003076.1 344 891 +
Chr1	stalkie_big_nohaplotig	CDS	13964568	13964649	.	-	0	Parent=FBgn0003076.1.mrna1;Target=FBgn0003076.1 262 343 +
Chr1	stalkie_big_nohaplotig	CDS	13964707	13964871	.	-	0	Parent=FBgn0003076.1.mrna1;Target=FBgn0003076.1 97 261 +
Chr1	stalkie_big_nohaplotig	CDS	13964945	13965025	.	-	0	Parent=FBgn0003076.1.mrna1;Target=FBgn0003076.1 16 96 +
Chr1	stalkie_big_nohaplotig	mRNA	13964352	13964588	.	+	.	ID=comp149496_c0_seq1.mrna1;geneID=comp149496_c0_seq1.path1;Name=comp149496_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=233;mismatches=4;indels=0;unknowns=0;Target=comp149496_c0_seq1 237 1 .;CDS_Target=comp149496_c0_seq1 202 125 .;locus=RLOC_00005905
Chr1	stalkie_big_nohaplotig	exon	13964352	13964588	98	+	.	Parent=comp149496_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13964476	13964553	.	+	0	Parent=comp149496_c0_seq1.mrna1
Chr1	gffcl	locus	13967957	13968834	.	+	.	ID=RLOC_00005906;geneIDs=FBgn0011016.1.path1;transcripts=FBgn0011016.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13967957	13968834	.	+	.	ID=FBgn0011016.1.mrna1;geneID=FBgn0011016.1.path1;Name=FBgn0011016.1;Dir=sensecoverage=100.0;identity=99.5;matches=648;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005906
Chr1	stalkie_big_nohaplotig	exon	13967957	13968027	98	+	.	Parent=FBgn0011016.1.mrna1;Target=FBgn0011016.1 1 71 +
Chr1	stalkie_big_nohaplotig	exon	13968195	13968579	99	+	.	Parent=FBgn0011016.1.mrna1;Target=FBgn0011016.1 72 456 +
Chr1	stalkie_big_nohaplotig	exon	13968640	13968834	99	+	.	Parent=FBgn0011016.1.mrna1;Target=FBgn0011016.1 457 651 +
Chr1	stalkie_big_nohaplotig	CDS	13967957	13968027	.	+	0	Parent=FBgn0011016.1.mrna1;Target=FBgn0011016.1 1 71 +
Chr1	stalkie_big_nohaplotig	CDS	13968195	13968579	.	+	1	Parent=FBgn0011016.1.mrna1;Target=FBgn0011016.1 72 456 +
Chr1	stalkie_big_nohaplotig	CDS	13968640	13968834	.	+	0	Parent=FBgn0011016.1.mrna1;Target=FBgn0011016.1 457 651 +
Chr1	gffcl	locus	13969325	13969864	.	-	.	ID=RLOC_00005907;geneIDs=FBgn0263604.1.path1;transcripts=FBgn0263604.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13969325	13969864	.	-	.	ID=FBgn0263604.1.mrna1;geneID=FBgn0263604.1.path1;Name=FBgn0263604.1;Dir=sensecoverage=100.0;identity=98.9;matches=466;mismatches=5;indels=0;unknowns=0;locus=RLOC_00005907
Chr1	stalkie_big_nohaplotig	exon	13969325	13969648	98	-	.	Parent=FBgn0263604.1.mrna1;Target=FBgn0263604.1 148 471 +
Chr1	stalkie_big_nohaplotig	exon	13969718	13969864	100	-	.	Parent=FBgn0263604.1.mrna1;Target=FBgn0263604.1 1 147 +
Chr1	stalkie_big_nohaplotig	CDS	13969325	13969648	.	-	0	Parent=FBgn0263604.1.mrna1;Target=FBgn0263604.1 148 471 +
Chr1	stalkie_big_nohaplotig	CDS	13969718	13969864	.	-	0	Parent=FBgn0263604.1.mrna1;Target=FBgn0263604.1 1 147 +
Chr1	gffcl	locus	13970475	13972001	.	+	.	ID=RLOC_00005908;geneIDs=FBgn0036005.1.path1;transcripts=FBgn0036005.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13970475	13972001	.	+	.	ID=FBgn0036005.1.mrna1;geneID=FBgn0036005.1.path1;Name=FBgn0036005.1;Dir=sensecoverage=100.0;identity=99.7;matches=1181;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005908
Chr1	stalkie_big_nohaplotig	exon	13970475	13970597	100	+	.	Parent=FBgn0036005.1.mrna1;Target=FBgn0036005.1 1 123 +
Chr1	stalkie_big_nohaplotig	exon	13970751	13970878	100	+	.	Parent=FBgn0036005.1.mrna1;Target=FBgn0036005.1 124 251 +
Chr1	stalkie_big_nohaplotig	exon	13970942	13971330	100	+	.	Parent=FBgn0036005.1.mrna1;Target=FBgn0036005.1 252 640 +
Chr1	stalkie_big_nohaplotig	exon	13971400	13971551	99	+	.	Parent=FBgn0036005.1.mrna1;Target=FBgn0036005.1 641 792 +
Chr1	stalkie_big_nohaplotig	exon	13971609	13972001	99	+	.	Parent=FBgn0036005.1.mrna1;Target=FBgn0036005.1 793 1185 +
Chr1	stalkie_big_nohaplotig	CDS	13970475	13970597	.	+	0	Parent=FBgn0036005.1.mrna1;Target=FBgn0036005.1 1 123 +
Chr1	stalkie_big_nohaplotig	CDS	13970751	13970878	.	+	0	Parent=FBgn0036005.1.mrna1;Target=FBgn0036005.1 124 251 +
Chr1	stalkie_big_nohaplotig	CDS	13970942	13971330	.	+	1	Parent=FBgn0036005.1.mrna1;Target=FBgn0036005.1 252 640 +
Chr1	stalkie_big_nohaplotig	CDS	13971400	13971551	.	+	2	Parent=FBgn0036005.1.mrna1;Target=FBgn0036005.1 641 792 +
Chr1	stalkie_big_nohaplotig	CDS	13971609	13972001	.	+	0	Parent=FBgn0036005.1.mrna1;Target=FBgn0036005.1 793 1185 +
Chr1	gffcl	locus	13977981	13984970	.	-	.	ID=RLOC_00005909;geneIDs=FBgn0036004.1.path1;transcripts=FBgn0036004.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13977981	13984970	.	-	.	ID=FBgn0036004.1.mrna1;geneID=FBgn0036004.1.path1;Name=FBgn0036004.1;Dir=sensecoverage=100.0;identity=99.6;matches=5188;mismatches=16;indels=7;unknowns=0;locus=RLOC_00005909
Chr1	stalkie_big_nohaplotig	exon	13977981	13983092	99	-	.	Parent=FBgn0036004.1.mrna1;Target=FBgn0036004.1 99 5205 +
Chr1	stalkie_big_nohaplotig	exon	13984873	13984970	100	-	.	Parent=FBgn0036004.1.mrna1;Target=FBgn0036004.1 1 98 +
Chr1	stalkie_big_nohaplotig	CDS	13977981	13983092	.	-	1	Parent=FBgn0036004.1.mrna1;Target=FBgn0036004.1 99 5205 +
Chr1	stalkie_big_nohaplotig	CDS	13984873	13984970	.	-	0	Parent=FBgn0036004.1.mrna1;Target=FBgn0036004.1 1 98 +
Chr1	gffcl	locus	13983846	13990886	.	-	.	ID=RLOC_00005910;geneIDs=comp156714_c0_seq1.path1;transcripts=comp156714_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13983846	13990886	.	-	.	ID=comp156714_c0_seq1.mrna1;geneID=comp156714_c0_seq1.path1;Name=comp156714_c0_seq1;Dir=indeterminatecoverage=96.2;identity=97.1;matches=1946;mismatches=17;indels=41;unknowns=0;Target=comp156714_c0_seq1 928 827 .;locus=RLOC_00005910
Chr1	stalkie_big_nohaplotig	exon	13983846	13983864	89	-	.	Parent=comp156714_c0_seq1.mrna1;Target=comp156714_c0_seq1 2112 2095 .
Chr1	stalkie_big_nohaplotig	exon	13985454	13985469	40	-	.	Parent=comp156714_c0_seq1.mrna1;Target=comp156714_c0_seq1 2094 2065 .
Chr1	stalkie_big_nohaplotig	exon	13986571	13986581	100	-	.	Parent=comp156714_c0_seq1.mrna1;Target=comp156714_c0_seq1 1985 1975 .
Chr1	stalkie_big_nohaplotig	exon	13986728	13986733	100	-	.	Parent=comp156714_c0_seq1.mrna1;Target=comp156714_c0_seq1 1974 1969 .
Chr1	stalkie_big_nohaplotig	exon	13988973	13990886	98	-	.	Parent=comp156714_c0_seq1.mrna1;Target=comp156714_c0_seq1 1946 11 .
Chr1	stalkie_big_nohaplotig	CDS	13989968	13990069	.	-	0	Parent=comp156714_c0_seq1.mrna1
Chr1	gffcl	locus	13986600	13987746	.	+	.	ID=RLOC_00005911;geneIDs=FBgn0011327.1.path1;transcripts=FBgn0011327.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13986600	13987746	.	+	.	ID=FBgn0011327.1.mrna1;geneID=FBgn0011327.1.path1;Name=FBgn0011327.1;Dir=sensecoverage=100.0;identity=99.9;matches=1010;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005911
Chr1	stalkie_big_nohaplotig	exon	13986600	13986711	100	+	.	Parent=FBgn0011327.1.mrna1;Target=FBgn0011327.1 1 112 +
Chr1	stalkie_big_nohaplotig	exon	13986780	13987528	99	+	.	Parent=FBgn0011327.1.mrna1;Target=FBgn0011327.1 113 861 +
Chr1	stalkie_big_nohaplotig	exon	13987597	13987746	100	+	.	Parent=FBgn0011327.1.mrna1;Target=FBgn0011327.1 862 1011 +
Chr1	stalkie_big_nohaplotig	CDS	13986600	13986711	.	+	0	Parent=FBgn0011327.1.mrna1;Target=FBgn0011327.1 1 112 +
Chr1	stalkie_big_nohaplotig	CDS	13986780	13987528	.	+	2	Parent=FBgn0011327.1.mrna1;Target=FBgn0011327.1 113 861 +
Chr1	stalkie_big_nohaplotig	CDS	13987597	13987746	.	+	0	Parent=FBgn0011327.1.mrna1;Target=FBgn0011327.1 862 1011 +
Chr1	gffcl	locus	13987971	13988785	.	+	.	ID=RLOC_00005912;geneIDs=comp116969_c0_seq1.path1;transcripts=comp116969_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13987971	13988785	.	+	.	ID=comp116969_c0_seq1.mrna1;geneID=comp116969_c0_seq1.path1;Name=comp116969_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=804;mismatches=11;indels=0;unknowns=0;Target=comp116969_c0_seq1 815 1 .;CDS_Target=comp116969_c0_seq1 765 688 .;locus=RLOC_00005912
Chr1	stalkie_big_nohaplotig	exon	13987971	13988785	98	+	.	Parent=comp116969_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	13988658	13988735	.	+	0	Parent=comp116969_c0_seq1.mrna1
Chr1	gffcl	locus	13990950	14006240	.	-	.	ID=RLOC_00005913;geneIDs=FBgn0052043.1.path1,comp152717_c1_seq1.path1;transcripts=comp152717_c1_seq1.mrna1,FBgn0052043.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	13990950	14006240	.	-	.	ID=comp152717_c1_seq1.mrna1;geneID=comp152717_c1_seq1.path1;Name=comp152717_c1_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=2464;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005913
Chr1	stalkie_big_nohaplotig	exon	13990950	13991342	100	-	.	Parent=comp152717_c1_seq1.mrna1;Target=comp152717_c1_seq1 1 393 -
Chr1	stalkie_big_nohaplotig	exon	13991610	13991689	100	-	.	Parent=comp152717_c1_seq1.mrna1;Target=comp152717_c1_seq1 394 473 -
Chr1	stalkie_big_nohaplotig	exon	13991751	13991920	100	-	.	Parent=comp152717_c1_seq1.mrna1;Target=comp152717_c1_seq1 474 643 -
Chr1	stalkie_big_nohaplotig	exon	13992433	13992743	100	-	.	Parent=comp152717_c1_seq1.mrna1;Target=comp152717_c1_seq1 644 954 -
Chr1	stalkie_big_nohaplotig	exon	13996439	13996512	100	-	.	Parent=comp152717_c1_seq1.mrna1;Target=comp152717_c1_seq1 955 1028 -
Chr1	stalkie_big_nohaplotig	exon	13996883	13997052	100	-	.	Parent=comp152717_c1_seq1.mrna1;Target=comp152717_c1_seq1 1029 1198 -
Chr1	stalkie_big_nohaplotig	exon	14004975	14006240	100	-	.	Parent=comp152717_c1_seq1.mrna1;Target=comp152717_c1_seq1 1199 2464 -
Chr1	stalkie_big_nohaplotig	CDS	13991287	13991342	.	-	2	Parent=comp152717_c1_seq1.mrna1;Target=comp152717_c1_seq1 338 393 .
Chr1	stalkie_big_nohaplotig	CDS	13991610	13991689	.	-	1	Parent=comp152717_c1_seq1.mrna1;Target=comp152717_c1_seq1 394 473 .
Chr1	stalkie_big_nohaplotig	CDS	13991751	13991920	.	-	0	Parent=comp152717_c1_seq1.mrna1;Target=comp152717_c1_seq1 474 643 .
Chr1	stalkie_big_nohaplotig	CDS	13992433	13992743	.	-	2	Parent=comp152717_c1_seq1.mrna1;Target=comp152717_c1_seq1 644 954 .
Chr1	stalkie_big_nohaplotig	CDS	13996439	13996512	.	-	1	Parent=comp152717_c1_seq1.mrna1;Target=comp152717_c1_seq1 955 1028 .
Chr1	stalkie_big_nohaplotig	CDS	13996883	13997052	.	-	0	Parent=comp152717_c1_seq1.mrna1;Target=comp152717_c1_seq1 1029 1198 .
Chr1	stalkie_big_nohaplotig	CDS	14004975	14006240	.	-	0	Parent=comp152717_c1_seq1.mrna1;Target=comp152717_c1_seq1 1199 2464 .
Chr1	stalkie_big_nohaplotig	mRNA	13995934	14006240	.	-	.	ID=FBgn0052043.1.mrna1;geneID=FBgn0052043.1.path1;Name=FBgn0052043.1;Dir=sensecoverage=100.0;identity=98.7;matches=1791;mismatches=0;indels=24;unknowns=0;locus=RLOC_00005913
Chr1	stalkie_big_nohaplotig	exon	13995934	13996238	92	-	.	Parent=FBgn0052043.1.mrna1;Target=FBgn0052043.1 1511 1791 +
Chr1	stalkie_big_nohaplotig	exon	13996439	13996512	100	-	.	Parent=FBgn0052043.1.mrna1;Target=FBgn0052043.1 1437 1510 +
Chr1	stalkie_big_nohaplotig	exon	13996883	13997052	100	-	.	Parent=FBgn0052043.1.mrna1;Target=FBgn0052043.1 1267 1436 +
Chr1	stalkie_big_nohaplotig	exon	14004975	14006240	100	-	.	Parent=FBgn0052043.1.mrna1;Target=FBgn0052043.1 1 1266 +
Chr1	stalkie_big_nohaplotig	CDS	13995934	13996238	.	-	2	Parent=FBgn0052043.1.mrna1;Target=FBgn0052043.1 1511 1791 +
Chr1	stalkie_big_nohaplotig	CDS	13996439	13996512	.	-	1	Parent=FBgn0052043.1.mrna1;Target=FBgn0052043.1 1437 1510 +
Chr1	stalkie_big_nohaplotig	CDS	13996883	13997052	.	-	0	Parent=FBgn0052043.1.mrna1;Target=FBgn0052043.1 1267 1436 +
Chr1	stalkie_big_nohaplotig	CDS	14004975	14006240	.	-	0	Parent=FBgn0052043.1.mrna1;Target=FBgn0052043.1 1 1266 +
Chr1	gffcl	locus	14010176	14011749	.	+	.	ID=RLOC_00005914;geneIDs=FBgn0036000.1.path1;transcripts=FBgn0036000.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14010176	14011749	.	+	.	ID=FBgn0036000.1.mrna1;geneID=FBgn0036000.1.path1;Name=FBgn0036000.1;Dir=sensecoverage=100.0;identity=100.0;matches=1287;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005914
Chr1	stalkie_big_nohaplotig	exon	14010176	14010322	100	+	.	Parent=FBgn0036000.1.mrna1;Target=FBgn0036000.1 1 147 +
Chr1	stalkie_big_nohaplotig	exon	14010378	14010646	100	+	.	Parent=FBgn0036000.1.mrna1;Target=FBgn0036000.1 148 416 +
Chr1	stalkie_big_nohaplotig	exon	14010709	14010890	100	+	.	Parent=FBgn0036000.1.mrna1;Target=FBgn0036000.1 417 598 +
Chr1	stalkie_big_nohaplotig	exon	14010947	14011325	100	+	.	Parent=FBgn0036000.1.mrna1;Target=FBgn0036000.1 599 977 +
Chr1	stalkie_big_nohaplotig	exon	14011385	14011510	100	+	.	Parent=FBgn0036000.1.mrna1;Target=FBgn0036000.1 978 1103 +
Chr1	stalkie_big_nohaplotig	exon	14011566	14011749	100	+	.	Parent=FBgn0036000.1.mrna1;Target=FBgn0036000.1 1104 1287 +
Chr1	stalkie_big_nohaplotig	CDS	14010176	14010322	.	+	0	Parent=FBgn0036000.1.mrna1;Target=FBgn0036000.1 1 147 +
Chr1	stalkie_big_nohaplotig	CDS	14010378	14010646	.	+	0	Parent=FBgn0036000.1.mrna1;Target=FBgn0036000.1 148 416 +
Chr1	stalkie_big_nohaplotig	CDS	14010709	14010890	.	+	1	Parent=FBgn0036000.1.mrna1;Target=FBgn0036000.1 417 598 +
Chr1	stalkie_big_nohaplotig	CDS	14010947	14011325	.	+	2	Parent=FBgn0036000.1.mrna1;Target=FBgn0036000.1 599 977 +
Chr1	stalkie_big_nohaplotig	CDS	14011385	14011510	.	+	1	Parent=FBgn0036000.1.mrna1;Target=FBgn0036000.1 978 1103 +
Chr1	stalkie_big_nohaplotig	CDS	14011566	14011749	.	+	1	Parent=FBgn0036000.1.mrna1;Target=FBgn0036000.1 1104 1287 +
Chr1	gffcl	locus	14011803	14012956	.	-	.	ID=RLOC_00005915;geneIDs=FBgn0035999.1.path1;transcripts=FBgn0035999.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14011803	14012956	.	-	.	ID=FBgn0035999.1.mrna1;geneID=FBgn0035999.1.path1;Name=FBgn0035999.1;Dir=sensecoverage=100.0;identity=99.4;matches=954;mismatches=6;indels=0;unknowns=0;locus=RLOC_00005915
Chr1	stalkie_big_nohaplotig	exon	14011803	14011909	99	-	.	Parent=FBgn0035999.1.mrna1;Target=FBgn0035999.1 854 960 +
Chr1	stalkie_big_nohaplotig	exon	14011971	14012280	99	-	.	Parent=FBgn0035999.1.mrna1;Target=FBgn0035999.1 544 853 +
Chr1	stalkie_big_nohaplotig	exon	14012356	14012739	99	-	.	Parent=FBgn0035999.1.mrna1;Target=FBgn0035999.1 160 543 +
Chr1	stalkie_big_nohaplotig	exon	14012798	14012956	99	-	.	Parent=FBgn0035999.1.mrna1;Target=FBgn0035999.1 1 159 +
Chr1	stalkie_big_nohaplotig	CDS	14011803	14011909	.	-	2	Parent=FBgn0035999.1.mrna1;Target=FBgn0035999.1 854 960 +
Chr1	stalkie_big_nohaplotig	CDS	14011971	14012280	.	-	0	Parent=FBgn0035999.1.mrna1;Target=FBgn0035999.1 544 853 +
Chr1	stalkie_big_nohaplotig	CDS	14012356	14012739	.	-	0	Parent=FBgn0035999.1.mrna1;Target=FBgn0035999.1 160 543 +
Chr1	stalkie_big_nohaplotig	CDS	14012798	14012956	.	-	0	Parent=FBgn0035999.1.mrna1;Target=FBgn0035999.1 1 159 +
Chr1	gffcl	locus	14015322	14018545	.	-	.	ID=RLOC_00005916;geneIDs=FBgn0052036.1.path1;transcripts=FBgn0052036.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14015322	14018545	.	-	.	ID=FBgn0052036.1.mrna1;geneID=FBgn0052036.1.path1;Name=FBgn0052036.1;Dir=sensecoverage=100.0;identity=99.8;matches=503;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005916
Chr1	stalkie_big_nohaplotig	exon	14015322	14015406	100	-	.	Parent=FBgn0052036.1.mrna1;Target=FBgn0052036.1 420 504 +
Chr1	stalkie_big_nohaplotig	exon	14015465	14015796	99	-	.	Parent=FBgn0052036.1.mrna1;Target=FBgn0052036.1 88 419 +
Chr1	stalkie_big_nohaplotig	exon	14018459	14018545	100	-	.	Parent=FBgn0052036.1.mrna1;Target=FBgn0052036.1 1 87 +
Chr1	stalkie_big_nohaplotig	CDS	14015322	14015406	.	-	1	Parent=FBgn0052036.1.mrna1;Target=FBgn0052036.1 420 504 +
Chr1	stalkie_big_nohaplotig	CDS	14015465	14015796	.	-	0	Parent=FBgn0052036.1.mrna1;Target=FBgn0052036.1 88 419 +
Chr1	stalkie_big_nohaplotig	CDS	14018459	14018545	.	-	0	Parent=FBgn0052036.1.mrna1;Target=FBgn0052036.1 1 87 +
Chr1	gffcl	locus	14020442	14021372	.	-	.	ID=RLOC_00005917;geneIDs=FBgn0052037.1.path2;transcripts=FBgn0052037.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	14020442	14021372	.	-	.	ID=FBgn0052037.1.mrna2;geneID=FBgn0052037.1.path2;Name=FBgn0052037.1;Dir=sensecoverage=95.4;identity=99.4;matches=686;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005917
Chr1	stalkie_big_nohaplotig	exon	14020442	14020555	100	-	.	Parent=FBgn0052037.1.mrna2;Target=FBgn0052037.1 610 723 +
Chr1	stalkie_big_nohaplotig	exon	14020675	14020841	99	-	.	Parent=FBgn0052037.1.mrna2;Target=FBgn0052037.1 443 609 +
Chr1	stalkie_big_nohaplotig	exon	14020902	14021157	99	-	.	Parent=FBgn0052037.1.mrna2;Target=FBgn0052037.1 187 442 +
Chr1	stalkie_big_nohaplotig	exon	14021220	14021372	98	-	.	Parent=FBgn0052037.1.mrna2;Target=FBgn0052037.1 34 186 +
Chr1	stalkie_big_nohaplotig	CDS	14020442	14020555	.	-	0	Parent=FBgn0052037.1.mrna2;Target=FBgn0052037.1 610 723 +
Chr1	stalkie_big_nohaplotig	CDS	14020675	14020841	.	-	2	Parent=FBgn0052037.1.mrna2;Target=FBgn0052037.1 443 609 +
Chr1	stalkie_big_nohaplotig	CDS	14020902	14021157	.	-	0	Parent=FBgn0052037.1.mrna2;Target=FBgn0052037.1 187 442 +
Chr1	stalkie_big_nohaplotig	CDS	14021220	14021372	.	-	0	Parent=FBgn0052037.1.mrna2;Target=FBgn0052037.1 34 186 +
Chr1	gffcl	locus	14025189	14026787	.	-	.	ID=RLOC_00005918;geneIDs=comp152894_c0_seq1.path1;transcripts=comp152894_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14025189	14026787	.	-	.	ID=comp152894_c0_seq1.mrna1;geneID=comp152894_c0_seq1.path1;Name=comp152894_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1593;mismatches=6;indels=14;unknowns=0;Target=comp152894_c0_seq1 1613 1 .;CDS_Target=comp152894_c0_seq1 1175 960 .;locus=RLOC_00005918
Chr1	stalkie_big_nohaplotig	exon	14025189	14026787	98	-	.	Parent=comp152894_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14025624	14025839	.	-	0	Parent=comp152894_c0_seq1.mrna1
Chr1	gffcl	locus	14032973	14948620	.	.	.	ID=RLOC_00005919;geneIDs=FBgn0035443.1.path1,comp148237_c0_seq1.path1,comp151197_c0_seq1.path1,comp156173_c0_seq1.path1,comp157442_c4_seq1.path1;transcripts=comp157442_c4_seq1.mrna1,comp156173_c0_seq1.mrna1,FBgn0035443.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14032973	14948620	.	+	.	ID=comp157442_c4_seq1.mrna1;geneID=comp157442_c4_seq1.path1;Name=comp157442_c4_seq1;Dir=sensecoverage=73.9;identity=90.7;matches=1175;mismatches=61;indels=60;unknowns=0;Target=comp157442_c4_seq1 69 386 +;locus=RLOC_00005919
Chr1	stalkie_big_nohaplotig	exon	14032973	14033909	98	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1 945 +
Chr1	stalkie_big_nohaplotig	exon	14038534	14038539	100	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 946 951 +
Chr1	stalkie_big_nohaplotig	exon	14059791	14059797	100	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 952 958 +
Chr1	stalkie_big_nohaplotig	exon	14063894	14063898	100	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 984 988 +
Chr1	stalkie_big_nohaplotig	exon	14070020	14070022	100	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 989 991 +
Chr1	stalkie_big_nohaplotig	exon	14071899	14071910	100	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 992 1003 +
Chr1	stalkie_big_nohaplotig	exon	14084722	14084729	100	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1005 1012 +
Chr1	stalkie_big_nohaplotig	exon	14089094	14089136	40	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1021 1082 +
Chr1	stalkie_big_nohaplotig	exon	14833935	14833939	100	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1083 1087 +
Chr1	stalkie_big_nohaplotig	exon	14847087	14847104	83	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1088 1105 +
Chr1	stalkie_big_nohaplotig	exon	14854622	14854636	73	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1106 1120 +
Chr1	stalkie_big_nohaplotig	exon	14861993	14861999	85	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1121 1127 +
Chr1	stalkie_big_nohaplotig	exon	14863442	14863445	100	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1128 1131 +
Chr1	stalkie_big_nohaplotig	exon	14872054	14872062	88	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1132 1140 +
Chr1	stalkie_big_nohaplotig	exon	14884330	14884351	59	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1141 1172 +
Chr1	stalkie_big_nohaplotig	exon	14886685	14886693	77	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1173 1179 +
Chr1	stalkie_big_nohaplotig	exon	14887280	14887286	100	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1180 1186 +
Chr1	stalkie_big_nohaplotig	exon	14888267	14888269	100	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1187 1189 +
Chr1	stalkie_big_nohaplotig	exon	14892668	14892673	100	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1190 1195 +
Chr1	stalkie_big_nohaplotig	exon	14894589	14894599	72	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1196 1206 +
Chr1	stalkie_big_nohaplotig	exon	14899084	14899090	100	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1207 1213 +
Chr1	stalkie_big_nohaplotig	exon	14915254	14915262	100	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1214 1222 +
Chr1	stalkie_big_nohaplotig	exon	14930999	14931000	50	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1223 1224 +
Chr1	stalkie_big_nohaplotig	exon	14933548	14933594	44	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1225 1292 +
Chr1	stalkie_big_nohaplotig	exon	14934055	14934063	100	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1293 1301 +
Chr1	stalkie_big_nohaplotig	exon	14938516	14938522	100	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1302 1308 +
Chr1	stalkie_big_nohaplotig	exon	14940668	14940676	100	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1313 1321 +
Chr1	stalkie_big_nohaplotig	exon	14945759	14945764	100	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1322 1327 +
Chr1	stalkie_big_nohaplotig	exon	14948617	14948620	100	+	.	Parent=comp157442_c4_seq1.mrna1;Target=comp157442_c4_seq1 1328 1331 +
Chr1	stalkie_big_nohaplotig	CDS	14033041	14033350	.	+	0	Parent=comp157442_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14063840	14064784	.	+	.	ID=comp156173_c0_seq1.mrna1;geneID=comp156173_c0_seq1.path1;Name=comp156173_c0_seq1;Dir=indeterminatecoverage=99.9;identity=95.2;matches=932;mismatches=13;indels=34;unknowns=0;Target=comp156173_c0_seq1 980 2 .;CDS_Target=comp156173_c0_seq1 979 830 .;locus=RLOC_00005919
Chr1	stalkie_big_nohaplotig	exon	14063840	14064784	95	+	.	Parent=comp156173_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14064634	14064783	.	+	0	Parent=comp156173_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14086752	14089185	.	+	.	ID=FBgn0035443.1.mrna1;geneID=FBgn0035443.1.path1;Name=FBgn0035443.1;Dir=sensecoverage=100.0;identity=99.7;matches=2204;mismatches=7;indels=0;unknowns=0;locus=RLOC_00005919
Chr1	stalkie_big_nohaplotig	exon	14086752	14087622	99	+	.	Parent=FBgn0035443.1.mrna1;Target=FBgn0035443.1 1 871 +
Chr1	stalkie_big_nohaplotig	exon	14087677	14088149	99	+	.	Parent=FBgn0035443.1.mrna1;Target=FBgn0035443.1 872 1344 +
Chr1	stalkie_big_nohaplotig	exon	14088202	14088370	99	+	.	Parent=FBgn0035443.1.mrna1;Target=FBgn0035443.1 1345 1513 +
Chr1	stalkie_big_nohaplotig	exon	14088428	14088628	100	+	.	Parent=FBgn0035443.1.mrna1;Target=FBgn0035443.1 1514 1714 +
Chr1	stalkie_big_nohaplotig	exon	14088689	14089185	99	+	.	Parent=FBgn0035443.1.mrna1;Target=FBgn0035443.1 1715 2211 +
Chr1	stalkie_big_nohaplotig	CDS	14086752	14087622	.	+	0	Parent=FBgn0035443.1.mrna1;Target=FBgn0035443.1 1 871 +
Chr1	stalkie_big_nohaplotig	CDS	14087677	14088149	.	+	2	Parent=FBgn0035443.1.mrna1;Target=FBgn0035443.1 872 1344 +
Chr1	stalkie_big_nohaplotig	CDS	14088202	14088370	.	+	0	Parent=FBgn0035443.1.mrna1;Target=FBgn0035443.1 1345 1513 +
Chr1	stalkie_big_nohaplotig	CDS	14088428	14088628	.	+	2	Parent=FBgn0035443.1.mrna1;Target=FBgn0035443.1 1514 1714 +
Chr1	stalkie_big_nohaplotig	CDS	14088689	14089185	.	+	2	Parent=FBgn0035443.1.mrna1;Target=FBgn0035443.1 1715 2211 +
Chr1	gffcl	locus	14038868	14044785	.	+	.	ID=RLOC_00005920;geneIDs=FBgn0029966.1.path1,FBgn0029966.2.path1;transcripts=FBgn0029966.1.mrna1,FBgn0029966.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14038868	14040889	.	+	.	ID=FBgn0029966.1.mrna1;geneID=FBgn0029966.1.path1;Name=FBgn0029966.1;Dir=sensecoverage=100.0;identity=99.3;matches=1912;mismatches=14;indels=0;unknowns=0;Target=FBgn0029966.1 886 1926 +;locus=RLOC_00005920
Chr1	stalkie_big_nohaplotig	exon	14038868	14039247	99	+	.	Parent=FBgn0029966.1.mrna1;Target=FBgn0029966.1 1 380 +
Chr1	stalkie_big_nohaplotig	exon	14039344	14040889	99	+	.	Parent=FBgn0029966.1.mrna1;Target=FBgn0029966.1 381 1926 +
Chr1	stalkie_big_nohaplotig	CDS	14039849	14040889	.	+	0	Parent=FBgn0029966.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14038868	14044785	.	+	.	ID=FBgn0029966.2.mrna1;geneID=FBgn0029966.2.path1;Name=FBgn0029966.2;Dir=sensecoverage=100.0;identity=99.3;matches=1948;mismatches=14;indels=0;unknowns=0;Target=FBgn0029966.2 427 1962 +;locus=RLOC_00005920
Chr1	stalkie_big_nohaplotig	exon	14038868	14039247	99	+	.	Parent=FBgn0029966.2.mrna1;Target=FBgn0029966.2 1 380 +
Chr1	stalkie_big_nohaplotig	exon	14043204	14044785	99	+	.	Parent=FBgn0029966.2.mrna1;Target=FBgn0029966.2 381 1962 +
Chr1	stalkie_big_nohaplotig	CDS	14043250	14044785	.	+	0	Parent=FBgn0029966.2.mrna1
Chr1	gffcl	locus	14047481	14047830	.	-	.	ID=RLOC_00005921;geneIDs=comp142304_c0_seq1.path1;transcripts=comp142304_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14047481	14047830	.	-	.	ID=comp142304_c0_seq1.mrna1;geneID=comp142304_c0_seq1.path1;Name=comp142304_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=350;mismatches=0;indels=0;unknowns=0;Target=comp142304_c0_seq1 350 1 .;CDS_Target=comp142304_c0_seq1 50 3 .;locus=RLOC_00005921
Chr1	stalkie_big_nohaplotig	exon	14047481	14047830	100	-	.	Parent=comp142304_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14047781	14047828	.	-	0	Parent=comp142304_c0_seq1.mrna1
Chr1	gffcl	locus	14078941	14079356	.	-	.	ID=RLOC_00005923;geneIDs=comp46165_c0_seq1.path1;transcripts=comp46165_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14078941	14079356	.	-	.	ID=comp46165_c0_seq1.mrna1;geneID=comp46165_c0_seq1.path1;Name=comp46165_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=414;mismatches=2;indels=0;unknowns=0;Target=comp46165_c0_seq1 416 1 .;CDS_Target=comp46165_c0_seq1 90 1 .;locus=RLOC_00005923
Chr1	stalkie_big_nohaplotig	exon	14078941	14079356	99	-	.	Parent=comp46165_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14079267	14079356	.	-	0	Parent=comp46165_c0_seq1.mrna1
Chr1	gffcl	locus	14081447	14084448	.	-	.	ID=RLOC_00005924;geneIDs=FBgn0027616.1.path1;transcripts=FBgn0027616.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14081447	14084448	.	-	.	ID=FBgn0027616.1.mrna1;geneID=FBgn0027616.1.path1;Name=FBgn0027616.1;Dir=sensecoverage=100.0;identity=99.9;matches=1541;mismatches=0;indels=1;unknowns=0;Target=FBgn0027616.1 3 119 +;locus=RLOC_00005924
Chr1	stalkie_big_nohaplotig	exon	14081447	14082630	100	-	.	Parent=FBgn0027616.1.mrna1;Target=FBgn0027616.1 359 1542 +
Chr1	stalkie_big_nohaplotig	exon	14084092	14084448	99	-	.	Parent=FBgn0027616.1.mrna1;Target=FBgn0027616.1 1 358 +
Chr1	stalkie_big_nohaplotig	CDS	14084331	14084446	.	-	0	Parent=FBgn0027616.1.mrna1
Chr1	gffcl	locus	14091181	14092901	.	+	.	ID=RLOC_00005925;geneIDs=FBgn0035158.1.path1;transcripts=FBgn0035158.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14091181	14092901	.	+	.	ID=FBgn0035158.1.mrna1;geneID=FBgn0035158.1.path1;Name=FBgn0035158.1;Dir=sensecoverage=100.0;identity=99.7;matches=1429;mismatches=2;indels=3;unknowns=0;locus=RLOC_00005925
Chr1	stalkie_big_nohaplotig	exon	14091181	14091219	100	+	.	Parent=FBgn0035158.1.mrna1;Target=FBgn0035158.1 1 39 +
Chr1	stalkie_big_nohaplotig	exon	14091510	14092901	99	+	.	Parent=FBgn0035158.1.mrna1;Target=FBgn0035158.1 40 1434 +
Chr1	stalkie_big_nohaplotig	CDS	14091181	14091219	.	+	0	Parent=FBgn0035158.1.mrna1;Target=FBgn0035158.1 1 39 +
Chr1	stalkie_big_nohaplotig	CDS	14091510	14092901	.	+	0	Parent=FBgn0035158.1.mrna1;Target=FBgn0035158.1 40 1434 +
Chr1	gffcl	locus	14096336	14098693	.	+	.	ID=RLOC_00005926;geneIDs=FBgn0035153.1.path1;transcripts=FBgn0035153.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14096336	14098693	.	+	.	ID=FBgn0035153.1.mrna1;geneID=FBgn0035153.1.path1;Name=FBgn0035153.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1517;mismatches=7;indels=0;unknowns=0;locus=RLOC_00005926
Chr1	stalkie_big_nohaplotig	exon	14096336	14096446	95	+	.	Parent=FBgn0035153.1.mrna1;Target=FBgn0035153.1 111 1 .
Chr1	stalkie_big_nohaplotig	exon	14097281	14098693	99	+	.	Parent=FBgn0035153.1.mrna1;Target=FBgn0035153.1 1524 112 .
Chr1	stalkie_big_nohaplotig	CDS	14096336	14096446	.	+	0	Parent=FBgn0035153.1.mrna1;Target=FBgn0035153.1 111 1 .
Chr1	stalkie_big_nohaplotig	CDS	14097281	14098693	.	+	0	Parent=FBgn0035153.1.mrna1;Target=FBgn0035153.1 1524 112 .
Chr1	gffcl	locus	14100590	14103111	.	-	.	ID=RLOC_00005927;geneIDs=FBgn0035150.1.path1;transcripts=FBgn0035150.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14100590	14103111	.	-	.	ID=FBgn0035150.1.mrna1;geneID=FBgn0035150.1.path1;Name=FBgn0035150.1;Dir=sensecoverage=100.0;identity=99.5;matches=2229;mismatches=11;indels=1;unknowns=0;locus=RLOC_00005927
Chr1	stalkie_big_nohaplotig	exon	14100590	14100764	99	-	.	Parent=FBgn0035150.1.mrna1;Target=FBgn0035150.1 2066 2241 +
Chr1	stalkie_big_nohaplotig	exon	14100824	14101247	99	-	.	Parent=FBgn0035150.1.mrna1;Target=FBgn0035150.1 1642 2065 +
Chr1	stalkie_big_nohaplotig	exon	14101301	14101580	98	-	.	Parent=FBgn0035150.1.mrna1;Target=FBgn0035150.1 1362 1641 +
Chr1	stalkie_big_nohaplotig	exon	14101630	14102104	99	-	.	Parent=FBgn0035150.1.mrna1;Target=FBgn0035150.1 887 1361 +
Chr1	stalkie_big_nohaplotig	exon	14102171	14103017	99	-	.	Parent=FBgn0035150.1.mrna1;Target=FBgn0035150.1 40 886 +
Chr1	stalkie_big_nohaplotig	exon	14103073	14103111	100	-	.	Parent=FBgn0035150.1.mrna1;Target=FBgn0035150.1 1 39 +
Chr1	stalkie_big_nohaplotig	CDS	14100590	14100764	.	-	2	Parent=FBgn0035150.1.mrna1;Target=FBgn0035150.1 2066 2241 +
Chr1	stalkie_big_nohaplotig	CDS	14100824	14101247	.	-	0	Parent=FBgn0035150.1.mrna1;Target=FBgn0035150.1 1642 2065 +
Chr1	stalkie_big_nohaplotig	CDS	14101301	14101580	.	-	1	Parent=FBgn0035150.1.mrna1;Target=FBgn0035150.1 1362 1641 +
Chr1	stalkie_big_nohaplotig	CDS	14101630	14102104	.	-	2	Parent=FBgn0035150.1.mrna1;Target=FBgn0035150.1 887 1361 +
Chr1	stalkie_big_nohaplotig	CDS	14102171	14103017	.	-	0	Parent=FBgn0035150.1.mrna1;Target=FBgn0035150.1 40 886 +
Chr1	stalkie_big_nohaplotig	CDS	14103073	14103111	.	-	0	Parent=FBgn0035150.1.mrna1;Target=FBgn0035150.1 1 39 +
Chr1	gffcl	locus	14105206	14106513	.	-	.	ID=RLOC_00005928;geneIDs=FBgn0035160.1.path1;transcripts=FBgn0035160.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14105206	14106513	.	-	.	ID=FBgn0035160.1.mrna1;geneID=FBgn0035160.1.path1;Name=FBgn0035160.1;Dir=sensecoverage=100.0;identity=99.6;matches=1246;mismatches=5;indels=0;unknowns=0;locus=RLOC_00005928
Chr1	stalkie_big_nohaplotig	exon	14105206	14106182	99	-	.	Parent=FBgn0035160.1.mrna1;Target=FBgn0035160.1 275 1251 +
Chr1	stalkie_big_nohaplotig	exon	14106240	14106513	99	-	.	Parent=FBgn0035160.1.mrna1;Target=FBgn0035160.1 1 274 +
Chr1	stalkie_big_nohaplotig	CDS	14105206	14106182	.	-	2	Parent=FBgn0035160.1.mrna1;Target=FBgn0035160.1 275 1251 +
Chr1	stalkie_big_nohaplotig	CDS	14106240	14106513	.	-	0	Parent=FBgn0035160.1.mrna1;Target=FBgn0035160.1 1 274 +
Chr1	gffcl	locus	14113964	14116900	.	+	.	ID=RLOC_00005929;geneIDs=FBgn0000575.1.path1;transcripts=FBgn0000575.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14113964	14116900	.	+	.	ID=FBgn0000575.1.mrna1;geneID=FBgn0000575.1.path1;Name=FBgn0000575.1;Dir=sensecoverage=100.0;identity=99.5;matches=647;mismatches=0;indels=3;unknowns=1;locus=RLOC_00005929
Chr1	stalkie_big_nohaplotig	exon	14113964	14114575	99	+	.	Parent=FBgn0000575.1.mrna1;Target=FBgn0000575.1 1 615 +
Chr1	stalkie_big_nohaplotig	exon	14116865	14116900	100	+	.	Parent=FBgn0000575.1.mrna1;Target=FBgn0000575.1 616 651 +
Chr1	stalkie_big_nohaplotig	CDS	14113964	14114575	.	+	0	Parent=FBgn0000575.1.mrna1;Target=FBgn0000575.1 1 615 +
Chr1	stalkie_big_nohaplotig	CDS	14116865	14116900	.	+	0	Parent=FBgn0000575.1.mrna1;Target=FBgn0000575.1 616 651 +
Chr1	gffcl	locus	14114731	14115452	.	-	.	ID=RLOC_00005930;geneIDs=comp117014_c0_seq1.path1;transcripts=comp117014_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14114731	14115452	.	-	.	ID=comp117014_c0_seq1.mrna1;geneID=comp117014_c0_seq1.path1;Name=comp117014_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=722;mismatches=0;indels=7;unknowns=0;Target=comp117014_c0_seq1 729 1 .;CDS_Target=comp117014_c0_seq1 592 395 .;locus=RLOC_00005930
Chr1	stalkie_big_nohaplotig	exon	14114731	14115452	99	-	.	Parent=comp117014_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14114868	14115065	.	-	0	Parent=comp117014_c0_seq1.mrna1
Chr1	gffcl	locus	14118398	14119690	.	-	.	ID=RLOC_00005931;geneIDs=comp157044_c0_seq1.path1;transcripts=comp157044_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14118398	14119690	.	-	.	ID=comp157044_c0_seq1.mrna1;geneID=comp157044_c0_seq1.path1;Name=comp157044_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1285;mismatches=8;indels=0;unknowns=0;Target=comp157044_c0_seq1 1293 1 .;CDS_Target=comp157044_c0_seq1 810 649 .;locus=RLOC_00005931
Chr1	stalkie_big_nohaplotig	exon	14118398	14119690	99	-	.	Parent=comp157044_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14118881	14119042	.	-	0	Parent=comp157044_c0_seq1.mrna1
Chr1	gffcl	locus	14161281	14161970	.	-	.	ID=RLOC_00005932;geneIDs=comp144104_c0_seq1.path1;transcripts=comp144104_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14161281	14161970	.	-	.	ID=comp144104_c0_seq1.mrna1;geneID=comp144104_c0_seq1.path1;Name=comp144104_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.0;matches=683;mismatches=0;indels=7;unknowns=0;Target=comp144104_c0_seq1 690 8 .;CDS_Target=comp144104_c0_seq1 182 9 .;locus=RLOC_00005932
Chr1	stalkie_big_nohaplotig	exon	14161281	14161970	98	-	.	Parent=comp144104_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14161796	14161969	.	-	0	Parent=comp144104_c0_seq1.mrna1
Chr1	gffcl	locus	14167720	14168312	.	+	.	ID=RLOC_00005933;geneIDs=comp146222_c0_seq1.path1;transcripts=comp146222_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14167720	14168312	.	+	.	ID=comp146222_c0_seq1.mrna1;geneID=comp146222_c0_seq1.path1;Name=comp146222_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=367;mismatches=6;indels=5;unknowns=0;Target=comp146222_c0_seq1 235 176 .;locus=RLOC_00005933
Chr1	stalkie_big_nohaplotig	exon	14167720	14167836	92	+	.	Parent=comp146222_c0_seq1.mrna1;Target=comp146222_c0_seq1 122 1 .
Chr1	stalkie_big_nohaplotig	exon	14168057	14168312	99	+	.	Parent=comp146222_c0_seq1.mrna1;Target=comp146222_c0_seq1 378 123 .
Chr1	stalkie_big_nohaplotig	CDS	14168110	14168169	.	+	0	Parent=comp146222_c0_seq1.mrna1
Chr1	gffcl	locus	14168616	14169772	.	-	.	ID=RLOC_00005934;geneIDs=FBgn0035165.1.path1,comp108461_c0_seq1.path1;transcripts=FBgn0035165.1.mrna1,comp108461_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14168616	14169772	.	-	.	ID=FBgn0035165.1.mrna1;geneID=FBgn0035165.1.path1;Name=FBgn0035165.1;Dir=sensecoverage=100.0;identity=100.0;matches=708;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005934
Chr1	stalkie_big_nohaplotig	exon	14168616	14168810	100	-	.	Parent=FBgn0035165.1.mrna1;Target=FBgn0035165.1 514 708 +
Chr1	stalkie_big_nohaplotig	exon	14169260	14169772	100	-	.	Parent=FBgn0035165.1.mrna1;Target=FBgn0035165.1 1 513 +
Chr1	stalkie_big_nohaplotig	CDS	14168616	14168810	.	-	0	Parent=FBgn0035165.1.mrna1;Target=FBgn0035165.1 514 708 +
Chr1	stalkie_big_nohaplotig	CDS	14169260	14169772	.	-	0	Parent=FBgn0035165.1.mrna1;Target=FBgn0035165.1 1 513 +
Chr1	stalkie_big_nohaplotig	mRNA	14168790	14169045	.	-	.	ID=comp108461_c0_seq1.mrna1;geneID=comp108461_c0_seq1.path1;Name=comp108461_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=255;mismatches=0;indels=1;unknowns=0;Target=comp108461_c0_seq1 255 1 .;CDS_Target=comp108461_c0_seq1 137 84 .;locus=RLOC_00005934
Chr1	stalkie_big_nohaplotig	exon	14168790	14169045	99	-	.	Parent=comp108461_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14168908	14168961	.	-	0	Parent=comp108461_c0_seq1.mrna1
Chr1	gffcl	locus	14171232	14171876	.	+	.	ID=RLOC_00005935;geneIDs=FBgn0035164.1.path1;transcripts=FBgn0035164.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14171232	14171876	.	+	.	ID=FBgn0035164.1.mrna1;geneID=FBgn0035164.1.path1;Name=FBgn0035164.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=643;mismatches=2;indels=0;unknowns=0;Target=FBgn0035164.1 645 1 .;locus=RLOC_00005935
Chr1	stalkie_big_nohaplotig	exon	14171232	14171876	99	+	.	Parent=FBgn0035164.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14171232	14171876	.	+	0	Parent=FBgn0035164.1.mrna1
Chr1	gffcl	locus	14171941	14172692	.	-	.	ID=RLOC_00005936;geneIDs=FBgn0260756.1.path1;transcripts=FBgn0260756.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14171941	14172692	.	-	.	ID=FBgn0260756.1.mrna1;geneID=FBgn0260756.1.path1;Name=FBgn0260756.1;Dir=sensecoverage=100.0;identity=99.4;matches=692;mismatches=3;indels=1;unknowns=0;locus=RLOC_00005936
Chr1	stalkie_big_nohaplotig	exon	14171941	14172537	99	-	.	Parent=FBgn0260756.1.mrna1;Target=FBgn0260756.1 100 696 +
Chr1	stalkie_big_nohaplotig	exon	14172595	14172692	97	-	.	Parent=FBgn0260756.1.mrna1;Target=FBgn0260756.1 1 99 +
Chr1	stalkie_big_nohaplotig	CDS	14171941	14172537	.	-	0	Parent=FBgn0260756.1.mrna1;Target=FBgn0260756.1 100 696 +
Chr1	stalkie_big_nohaplotig	CDS	14172595	14172618	.	-	0	Parent=FBgn0260756.1.mrna1;Target=FBgn0260756.1 76 99 +
Chr1	gffcl	locus	14175406	14180845	.	.	.	ID=RLOC_00005937;geneIDs=FBgn0035162.1.path1,comp107782_c0_seq1.path1,comp181497_c0_seq1.path1;transcripts=FBgn0035162.1.mrna1,comp107782_c0_seq1.mrna1,comp181497_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14175406	14180845	.	-	.	ID=FBgn0035162.1.mrna1;geneID=FBgn0035162.1.path1;Name=FBgn0035162.1;Dir=sensecoverage=100.0;identity=99.8;matches=3721;mismatches=7;indels=1;unknowns=0;locus=RLOC_00005937
Chr1	stalkie_big_nohaplotig	exon	14175406	14177378	99	-	.	Parent=FBgn0035162.1.mrna1;Target=FBgn0035162.1 1756 3729 +
Chr1	stalkie_big_nohaplotig	exon	14177546	14177853	100	-	.	Parent=FBgn0035162.1.mrna1;Target=FBgn0035162.1 1448 1755 +
Chr1	stalkie_big_nohaplotig	exon	14178616	14178950	99	-	.	Parent=FBgn0035162.1.mrna1;Target=FBgn0035162.1 1113 1447 +
Chr1	stalkie_big_nohaplotig	exon	14179013	14179487	100	-	.	Parent=FBgn0035162.1.mrna1;Target=FBgn0035162.1 638 1112 +
Chr1	stalkie_big_nohaplotig	exon	14179730	14180095	99	-	.	Parent=FBgn0035162.1.mrna1;Target=FBgn0035162.1 272 637 +
Chr1	stalkie_big_nohaplotig	exon	14180329	14180573	98	-	.	Parent=FBgn0035162.1.mrna1;Target=FBgn0035162.1 27 271 +
Chr1	stalkie_big_nohaplotig	exon	14180820	14180845	100	-	.	Parent=FBgn0035162.1.mrna1;Target=FBgn0035162.1 1 26 +
Chr1	stalkie_big_nohaplotig	CDS	14175406	14177378	.	-	0	Parent=FBgn0035162.1.mrna1;Target=FBgn0035162.1 1756 3729 +
Chr1	stalkie_big_nohaplotig	CDS	14177546	14177853	.	-	2	Parent=FBgn0035162.1.mrna1;Target=FBgn0035162.1 1448 1755 +
Chr1	stalkie_big_nohaplotig	CDS	14178616	14178950	.	-	1	Parent=FBgn0035162.1.mrna1;Target=FBgn0035162.1 1113 1447 +
Chr1	stalkie_big_nohaplotig	CDS	14179013	14179487	.	-	2	Parent=FBgn0035162.1.mrna1;Target=FBgn0035162.1 638 1112 +
Chr1	stalkie_big_nohaplotig	CDS	14179730	14180095	.	-	2	Parent=FBgn0035162.1.mrna1;Target=FBgn0035162.1 272 637 +
Chr1	stalkie_big_nohaplotig	CDS	14180329	14180573	.	-	1	Parent=FBgn0035162.1.mrna1;Target=FBgn0035162.1 27 271 +
Chr1	stalkie_big_nohaplotig	CDS	14180820	14180845	.	-	0	Parent=FBgn0035162.1.mrna1;Target=FBgn0035162.1 1 26 +
Chr1	stalkie_big_nohaplotig	mRNA	14177831	14178240	.	+	.	ID=comp107782_c0_seq1.mrna1;geneID=comp107782_c0_seq1.path1;Name=comp107782_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=409;mismatches=1;indels=0;unknowns=0;Target=comp107782_c0_seq1 410 1 .;CDS_Target=comp107782_c0_seq1 85 2 .;locus=RLOC_00005937
Chr1	stalkie_big_nohaplotig	exon	14177831	14178240	99	+	.	Parent=comp107782_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14177832	14177915	.	+	0	Parent=comp107782_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14180553	14180843	.	+	.	ID=comp181497_c0_seq1.mrna1;geneID=comp181497_c0_seq1.path1;Name=comp181497_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=289;mismatches=2;indels=0;unknowns=0;Target=comp181497_c0_seq1 291 1 .;CDS_Target=comp181497_c0_seq1 224 129 .;locus=RLOC_00005937
Chr1	stalkie_big_nohaplotig	exon	14180553	14180843	99	+	.	Parent=comp181497_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14180681	14180776	.	+	0	Parent=comp181497_c0_seq1.mrna1
Chr1	gffcl	locus	14183223	14184212	.	+	.	ID=RLOC_00005938;geneIDs=FBgn0035532.1.path1;transcripts=FBgn0035532.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14183223	14184212	.	+	.	ID=FBgn0035532.1.mrna1;geneID=FBgn0035532.1.path1;Name=FBgn0035532.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=989;mismatches=1;indels=0;unknowns=0;Target=FBgn0035532.1 990 1 .;locus=RLOC_00005938
Chr1	stalkie_big_nohaplotig	exon	14183223	14184212	99	+	.	Parent=FBgn0035532.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14183223	14184212	.	+	0	Parent=FBgn0035532.1.mrna1
Chr1	gffcl	locus	14184523	14185608	.	-	.	ID=RLOC_00005939;geneIDs=FBgn0052250.1.path1;transcripts=FBgn0052250.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14184523	14185608	.	-	.	ID=FBgn0052250.1.mrna1;geneID=FBgn0052250.1.path1;Name=FBgn0052250.1;Dir=sensecoverage=100.0;identity=100.0;matches=966;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005939
Chr1	stalkie_big_nohaplotig	exon	14184523	14185349	100	-	.	Parent=FBgn0052250.1.mrna1;Target=FBgn0052250.1 140 966 +
Chr1	stalkie_big_nohaplotig	exon	14185415	14185475	100	-	.	Parent=FBgn0052250.1.mrna1;Target=FBgn0052250.1 79 139 +
Chr1	stalkie_big_nohaplotig	exon	14185531	14185608	100	-	.	Parent=FBgn0052250.1.mrna1;Target=FBgn0052250.1 1 78 +
Chr1	stalkie_big_nohaplotig	CDS	14184523	14185349	.	-	2	Parent=FBgn0052250.1.mrna1;Target=FBgn0052250.1 140 966 +
Chr1	stalkie_big_nohaplotig	CDS	14185415	14185475	.	-	0	Parent=FBgn0052250.1.mrna1;Target=FBgn0052250.1 79 139 +
Chr1	stalkie_big_nohaplotig	CDS	14185531	14185608	.	-	0	Parent=FBgn0052250.1.mrna1;Target=FBgn0052250.1 1 78 +
Chr1	gffcl	locus	14186040	14190918	.	-	.	ID=RLOC_00005940;geneIDs=FBgn0052251.1.path1;transcripts=FBgn0052251.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14186040	14190918	.	-	.	ID=FBgn0052251.1.mrna1;geneID=FBgn0052251.1.path1;Name=FBgn0052251.1;Dir=sensecoverage=100.0;identity=99.3;matches=3307;mismatches=5;indels=18;unknowns=0;locus=RLOC_00005940
Chr1	stalkie_big_nohaplotig	exon	14186040	14186159	100	-	.	Parent=FBgn0052251.1.mrna1;Target=FBgn0052251.1 3193 3312 +
Chr1	stalkie_big_nohaplotig	exon	14186217	14186561	99	-	.	Parent=FBgn0052251.1.mrna1;Target=FBgn0052251.1 2848 3192 +
Chr1	stalkie_big_nohaplotig	exon	14186615	14186876	100	-	.	Parent=FBgn0052251.1.mrna1;Target=FBgn0052251.1 2586 2847 +
Chr1	stalkie_big_nohaplotig	exon	14186947	14188314	98	-	.	Parent=FBgn0052251.1.mrna1;Target=FBgn0052251.1 1236 2585 +
Chr1	stalkie_big_nohaplotig	exon	14189500	14190057	99	-	.	Parent=FBgn0052251.1.mrna1;Target=FBgn0052251.1 678 1235 +
Chr1	stalkie_big_nohaplotig	exon	14190127	14190270	100	-	.	Parent=FBgn0052251.1.mrna1;Target=FBgn0052251.1 534 677 +
Chr1	stalkie_big_nohaplotig	exon	14190329	14190408	100	-	.	Parent=FBgn0052251.1.mrna1;Target=FBgn0052251.1 454 533 +
Chr1	stalkie_big_nohaplotig	exon	14190466	14190918	100	-	.	Parent=FBgn0052251.1.mrna1;Target=FBgn0052251.1 1 453 +
Chr1	stalkie_big_nohaplotig	CDS	14186040	14186159	.	-	0	Parent=FBgn0052251.1.mrna1;Target=FBgn0052251.1 3193 3312 +
Chr1	stalkie_big_nohaplotig	CDS	14186217	14186561	.	-	0	Parent=FBgn0052251.1.mrna1;Target=FBgn0052251.1 2848 3192 +
Chr1	stalkie_big_nohaplotig	CDS	14186615	14186876	.	-	1	Parent=FBgn0052251.1.mrna1;Target=FBgn0052251.1 2586 2847 +
Chr1	stalkie_big_nohaplotig	CDS	14186947	14188314	.	-	1	Parent=FBgn0052251.1.mrna1;Target=FBgn0052251.1 1236 2585 +
Chr1	stalkie_big_nohaplotig	CDS	14189500	14190057	.	-	1	Parent=FBgn0052251.1.mrna1;Target=FBgn0052251.1 678 1235 +
Chr1	stalkie_big_nohaplotig	CDS	14190127	14190270	.	-	1	Parent=FBgn0052251.1.mrna1;Target=FBgn0052251.1 534 677 +
Chr1	stalkie_big_nohaplotig	CDS	14190329	14190408	.	-	0	Parent=FBgn0052251.1.mrna1;Target=FBgn0052251.1 454 533 +
Chr1	stalkie_big_nohaplotig	CDS	14190466	14190918	.	-	0	Parent=FBgn0052251.1.mrna1;Target=FBgn0052251.1 1 453 +
Chr1	gffcl	locus	14191694	14192496	.	+	.	ID=RLOC_00005941;geneIDs=FBgn0052418.1.path1;transcripts=FBgn0052418.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14191694	14192496	.	+	.	ID=FBgn0052418.1.mrna1;geneID=FBgn0052418.1.path1;Name=FBgn0052418.1;Dir=sensecoverage=99.5;identity=99.7;matches=738;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005941
Chr1	stalkie_big_nohaplotig	exon	14191694	14191806	100	+	.	Parent=FBgn0052418.1.mrna1;Target=FBgn0052418.1 1 113 +
Chr1	stalkie_big_nohaplotig	exon	14191870	14192496	99	+	.	Parent=FBgn0052418.1.mrna1;Target=FBgn0052418.1 114 740 +
Chr1	stalkie_big_nohaplotig	CDS	14191694	14191806	.	+	0	Parent=FBgn0052418.1.mrna1;Target=FBgn0052418.1 1 113 +
Chr1	stalkie_big_nohaplotig	CDS	14191870	14192494	.	+	1	Parent=FBgn0052418.1.mrna1;Target=FBgn0052418.1 114 738 +
Chr1	gffcl	locus	14192989	14193323	.	-	.	ID=RLOC_00005942;geneIDs=comp116244_c0_seq1.path1;transcripts=comp116244_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14192989	14193323	.	-	.	ID=comp116244_c0_seq1.mrna1;geneID=comp116244_c0_seq1.path1;Name=comp116244_c0_seq1;Dir=indeterminatecoverage=99.7;identity=97.9;matches=331;mismatches=4;indels=3;unknowns=0;Target=comp116244_c0_seq1 338 1 .;CDS_Target=comp116244_c0_seq1 338 249 .;locus=RLOC_00005942
Chr1	stalkie_big_nohaplotig	exon	14192989	14193323	97	-	.	Parent=comp116244_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14192989	14193075	.	-	0	Parent=comp116244_c0_seq1.mrna1
Chr1	gffcl	locus	14194431	14198707	.	-	.	ID=RLOC_00005943;geneIDs=FBgn0260936.1.path1;transcripts=FBgn0260936.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14194431	14198707	.	-	.	ID=FBgn0260936.1.mrna1;geneID=FBgn0260936.1.path1;Name=FBgn0260936.1;Dir=sensecoverage=100.0;identity=99.8;matches=3393;mismatches=6;indels=0;unknowns=0;locus=RLOC_00005943
Chr1	stalkie_big_nohaplotig	exon	14194431	14194739	99	-	.	Parent=FBgn0260936.1.mrna1;Target=FBgn0260936.1 3091 3399 +
Chr1	stalkie_big_nohaplotig	exon	14194812	14196650	99	-	.	Parent=FBgn0260936.1.mrna1;Target=FBgn0260936.1 1252 3090 +
Chr1	stalkie_big_nohaplotig	exon	14196732	14197480	99	-	.	Parent=FBgn0260936.1.mrna1;Target=FBgn0260936.1 503 1251 +
Chr1	stalkie_big_nohaplotig	exon	14198206	14198707	99	-	.	Parent=FBgn0260936.1.mrna1;Target=FBgn0260936.1 1 502 +
Chr1	stalkie_big_nohaplotig	CDS	14194431	14194739	.	-	0	Parent=FBgn0260936.1.mrna1;Target=FBgn0260936.1 3091 3399 +
Chr1	stalkie_big_nohaplotig	CDS	14194812	14196650	.	-	0	Parent=FBgn0260936.1.mrna1;Target=FBgn0260936.1 1252 3090 +
Chr1	stalkie_big_nohaplotig	CDS	14196732	14197480	.	-	2	Parent=FBgn0260936.1.mrna1;Target=FBgn0260936.1 503 1251 +
Chr1	stalkie_big_nohaplotig	CDS	14198206	14198707	.	-	0	Parent=FBgn0260936.1.mrna1;Target=FBgn0260936.1 1 502 +
Chr1	gffcl	locus	14214817	14227197	.	+	.	ID=RLOC_00005944;geneIDs=comp161125_c1_seq1.path1;transcripts=comp161125_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14214817	14227197	.	+	.	ID=comp161125_c1_seq1.mrna1;geneID=comp161125_c1_seq1.path1;Name=comp161125_c1_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=4801;mismatches=16;indels=0;unknowns=0;locus=RLOC_00005944
Chr1	stalkie_big_nohaplotig	exon	14214817	14215370	99	+	.	Parent=comp161125_c1_seq1.mrna1;Target=comp161125_c1_seq1 4264 4817 -
Chr1	stalkie_big_nohaplotig	exon	14216778	14216997	100	+	.	Parent=comp161125_c1_seq1.mrna1;Target=comp161125_c1_seq1 4044 4263 -
Chr1	stalkie_big_nohaplotig	exon	14219331	14219571	100	+	.	Parent=comp161125_c1_seq1.mrna1;Target=comp161125_c1_seq1 3803 4043 -
Chr1	stalkie_big_nohaplotig	exon	14219953	14220121	100	+	.	Parent=comp161125_c1_seq1.mrna1;Target=comp161125_c1_seq1 3634 3802 -
Chr1	stalkie_big_nohaplotig	exon	14221038	14221335	100	+	.	Parent=comp161125_c1_seq1.mrna1;Target=comp161125_c1_seq1 3336 3633 -
Chr1	stalkie_big_nohaplotig	exon	14222581	14223090	99	+	.	Parent=comp161125_c1_seq1.mrna1;Target=comp161125_c1_seq1 2826 3335 -
Chr1	stalkie_big_nohaplotig	exon	14223271	14223744	99	+	.	Parent=comp161125_c1_seq1.mrna1;Target=comp161125_c1_seq1 2352 2825 -
Chr1	stalkie_big_nohaplotig	exon	14224430	14225819	99	+	.	Parent=comp161125_c1_seq1.mrna1;Target=comp161125_c1_seq1 962 2351 -
Chr1	stalkie_big_nohaplotig	exon	14225891	14226137	100	+	.	Parent=comp161125_c1_seq1.mrna1;Target=comp161125_c1_seq1 715 961 -
Chr1	stalkie_big_nohaplotig	exon	14226429	14226621	98	+	.	Parent=comp161125_c1_seq1.mrna1;Target=comp161125_c1_seq1 522 714 -
Chr1	stalkie_big_nohaplotig	exon	14226677	14227197	99	+	.	Parent=comp161125_c1_seq1.mrna1;Target=comp161125_c1_seq1 1 521 -
Chr1	stalkie_big_nohaplotig	CDS	14215031	14215370	.	+	0	Parent=comp161125_c1_seq1.mrna1;Target=comp161125_c1_seq1 4264 4603 .
Chr1	stalkie_big_nohaplotig	CDS	14216778	14216997	.	+	2	Parent=comp161125_c1_seq1.mrna1;Target=comp161125_c1_seq1 4044 4263 .
Chr1	stalkie_big_nohaplotig	CDS	14219331	14219571	.	+	1	Parent=comp161125_c1_seq1.mrna1;Target=comp161125_c1_seq1 3803 4043 .
Chr1	stalkie_big_nohaplotig	CDS	14219953	14220121	.	+	0	Parent=comp161125_c1_seq1.mrna1;Target=comp161125_c1_seq1 3634 3802 .
Chr1	stalkie_big_nohaplotig	CDS	14221038	14221335	.	+	2	Parent=comp161125_c1_seq1.mrna1;Target=comp161125_c1_seq1 3336 3633 .
Chr1	stalkie_big_nohaplotig	CDS	14222581	14223090	.	+	1	Parent=comp161125_c1_seq1.mrna1;Target=comp161125_c1_seq1 2826 3335 .
Chr1	stalkie_big_nohaplotig	CDS	14223271	14223744	.	+	1	Parent=comp161125_c1_seq1.mrna1;Target=comp161125_c1_seq1 2352 2825 .
Chr1	stalkie_big_nohaplotig	CDS	14224430	14225819	.	+	1	Parent=comp161125_c1_seq1.mrna1;Target=comp161125_c1_seq1 962 2351 .
Chr1	stalkie_big_nohaplotig	CDS	14225891	14226137	.	+	0	Parent=comp161125_c1_seq1.mrna1;Target=comp161125_c1_seq1 715 961 .
Chr1	stalkie_big_nohaplotig	CDS	14226429	14226520	.	+	2	Parent=comp161125_c1_seq1.mrna1;Target=comp161125_c1_seq1 623 714 .
Chr1	gffcl	locus	14228451	14231046	.	.	.	ID=RLOC_00005945;geneIDs=comp154733_c1_seq1.path1,comp154733_c1_seq1.path2,comp159023_c0_seq1.path1;transcripts=comp159023_c0_seq1.mrna1,comp154733_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14228451	14230005	.	+	.	ID=comp159023_c0_seq1.mrna1;geneID=comp159023_c0_seq1.path1;Name=comp159023_c0_seq1;Dir=indeterminatecoverage=99.1;identity=97.2;matches=1511;mismatches=15;indels=29;unknowns=0;Target=comp159023_c0_seq1 1540 15 .;CDS_Target=comp159023_c0_seq1 1214 1014 .;locus=RLOC_00005945
Chr1	stalkie_big_nohaplotig	exon	14228451	14230005	97	+	.	Parent=comp159023_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14229479	14229679	.	+	0	Parent=comp159023_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14230161	14230202	.	-	.	ID=comp154733_c1_seq1.mrna1;geneID=comp154733_c1_seq1.path1;Name=comp154733_c1_seq1;Dir=indeterminatecoverage=3.8;identity=97.6;matches=41;mismatches=1;indels=0;unknowns=0;Target=comp154733_c1_seq1 42 1 .;locus=RLOC_00005945
Chr1	stalkie_big_nohaplotig	exon	14230161	14230202	97	-	.	Parent=comp154733_c1_seq1.mrna1
Chr1	gffcl	locus	14236987	14237592	.	+	.	ID=RLOC_00005946;geneIDs=comp146942_c1_seq1.path1;transcripts=comp146942_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14236987	14237592	.	+	.	ID=comp146942_c1_seq1.mrna1;geneID=comp146942_c1_seq1.path1;Name=comp146942_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=604;mismatches=2;indels=0;unknowns=0;Target=comp146942_c1_seq1 606 1 .;CDS_Target=comp146942_c1_seq1 424 335 .;locus=RLOC_00005946
Chr1	stalkie_big_nohaplotig	exon	14236987	14237592	99	+	.	Parent=comp146942_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14237321	14237410	.	+	0	Parent=comp146942_c1_seq1.mrna1
Chr1	gffcl	locus	14251916	14252826	.	+	.	ID=RLOC_00005947;geneIDs=FBgn0035755.1.path1;transcripts=FBgn0035755.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14251916	14252826	.	+	.	ID=FBgn0035755.1.mrna1;geneID=FBgn0035755.1.path1;Name=FBgn0035755.1;Dir=sensecoverage=99.4;identity=99.9;matches=786;mismatches=0;indels=1;unknowns=0;locus=RLOC_00005947
Chr1	stalkie_big_nohaplotig	exon	14251916	14252272	100	+	.	Parent=FBgn0035755.1.mrna1;Target=FBgn0035755.1 6 362 +
Chr1	stalkie_big_nohaplotig	exon	14252330	14252584	100	+	.	Parent=FBgn0035755.1.mrna1;Target=FBgn0035755.1 363 617 +
Chr1	stalkie_big_nohaplotig	exon	14252653	14252826	99	+	.	Parent=FBgn0035755.1.mrna1;Target=FBgn0035755.1 618 792 +
Chr1	stalkie_big_nohaplotig	CDS	14251917	14252272	.	+	0	Parent=FBgn0035755.1.mrna1;Target=FBgn0035755.1 7 362 +
Chr1	stalkie_big_nohaplotig	CDS	14252330	14252584	.	+	1	Parent=FBgn0035755.1.mrna1;Target=FBgn0035755.1 363 617 +
Chr1	stalkie_big_nohaplotig	CDS	14252653	14252826	.	+	1	Parent=FBgn0035755.1.mrna1;Target=FBgn0035755.1 618 792 +
Chr1	gffcl	locus	14255482	14256719	.	+	.	ID=RLOC_00005948;geneIDs=FBgn0035421.1.path1;transcripts=FBgn0035421.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14255482	14256719	.	+	.	ID=FBgn0035421.1.mrna1;geneID=FBgn0035421.1.path1;Name=FBgn0035421.1;Dir=sensecoverage=99.9;identity=99.9;matches=1078;mismatches=0;indels=1;unknowns=0;locus=RLOC_00005948
Chr1	stalkie_big_nohaplotig	exon	14255482	14255530	100	+	.	Parent=FBgn0035421.1.mrna1;Target=FBgn0035421.1 1 49 +
Chr1	stalkie_big_nohaplotig	exon	14255587	14255770	99	+	.	Parent=FBgn0035421.1.mrna1;Target=FBgn0035421.1 50 234 +
Chr1	stalkie_big_nohaplotig	exon	14255820	14255977	100	+	.	Parent=FBgn0035421.1.mrna1;Target=FBgn0035421.1 235 392 +
Chr1	stalkie_big_nohaplotig	exon	14256033	14256719	100	+	.	Parent=FBgn0035421.1.mrna1;Target=FBgn0035421.1 393 1079 +
Chr1	stalkie_big_nohaplotig	CDS	14255484	14255530	.	+	0	Parent=FBgn0035421.1.mrna1;Target=FBgn0035421.1 3 49 +
Chr1	stalkie_big_nohaplotig	CDS	14255587	14255664	.	+	1	Parent=FBgn0035421.1.mrna1;Target=FBgn0035421.1 50 128 +
Chr1	gffcl	locus	14257502	14259750	.	+	.	ID=RLOC_00005949;geneIDs=FBgn0000543.1.path1;transcripts=FBgn0000543.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14257502	14259750	.	+	.	ID=FBgn0000543.1.mrna1;geneID=FBgn0000543.1.path1;Name=FBgn0000543.1;Dir=sensecoverage=100.0;identity=99.8;matches=2062;mismatches=5;indels=0;unknowns=0;locus=RLOC_00005949
Chr1	stalkie_big_nohaplotig	exon	14257502	14257817	99	+	.	Parent=FBgn0000543.1.mrna1;Target=FBgn0000543.1 1 316 +
Chr1	stalkie_big_nohaplotig	exon	14257882	14258087	100	+	.	Parent=FBgn0000543.1.mrna1;Target=FBgn0000543.1 317 522 +
Chr1	stalkie_big_nohaplotig	exon	14258147	14258917	99	+	.	Parent=FBgn0000543.1.mrna1;Target=FBgn0000543.1 523 1293 +
Chr1	stalkie_big_nohaplotig	exon	14258977	14259750	100	+	.	Parent=FBgn0000543.1.mrna1;Target=FBgn0000543.1 1294 2067 +
Chr1	stalkie_big_nohaplotig	CDS	14257502	14257817	.	+	0	Parent=FBgn0000543.1.mrna1;Target=FBgn0000543.1 1 316 +
Chr1	stalkie_big_nohaplotig	CDS	14257882	14258087	.	+	2	Parent=FBgn0000543.1.mrna1;Target=FBgn0000543.1 317 522 +
Chr1	stalkie_big_nohaplotig	CDS	14258147	14258917	.	+	0	Parent=FBgn0000543.1.mrna1;Target=FBgn0000543.1 523 1293 +
Chr1	stalkie_big_nohaplotig	CDS	14258977	14259750	.	+	0	Parent=FBgn0000543.1.mrna1;Target=FBgn0000543.1 1294 2067 +
Chr1	gffcl	locus	14261902	14264952	.	+	.	ID=RLOC_00005950;geneIDs=FBgn0015360.1.path1;transcripts=FBgn0015360.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14261902	14264952	.	+	.	ID=FBgn0015360.1.mrna1;geneID=FBgn0015360.1.path1;Name=FBgn0015360.1;Dir=sensecoverage=100.0;identity=99.7;matches=2803;mismatches=8;indels=0;unknowns=0;locus=RLOC_00005950
Chr1	stalkie_big_nohaplotig	exon	14261902	14262763	99	+	.	Parent=FBgn0015360.1.mrna1;Target=FBgn0015360.1 1 862 +
Chr1	stalkie_big_nohaplotig	exon	14262834	14262994	100	+	.	Parent=FBgn0015360.1.mrna1;Target=FBgn0015360.1 863 1023 +
Chr1	stalkie_big_nohaplotig	exon	14263165	14264952	99	+	.	Parent=FBgn0015360.1.mrna1;Target=FBgn0015360.1 1024 2811 +
Chr1	stalkie_big_nohaplotig	CDS	14261902	14262763	.	+	0	Parent=FBgn0015360.1.mrna1;Target=FBgn0015360.1 1 862 +
Chr1	stalkie_big_nohaplotig	CDS	14262834	14262994	.	+	2	Parent=FBgn0015360.1.mrna1;Target=FBgn0015360.1 863 1023 +
Chr1	stalkie_big_nohaplotig	CDS	14263165	14264952	.	+	0	Parent=FBgn0015360.1.mrna1;Target=FBgn0015360.1 1024 2811 +
Chr1	gffcl	locus	14266175	14267080	.	-	.	ID=RLOC_00005951;geneIDs=FBgn0015359.1.path1;transcripts=FBgn0015359.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14266175	14267080	.	-	.	ID=FBgn0015359.1.mrna1;geneID=FBgn0015359.1.path1;Name=FBgn0015359.1;Dir=sensecoverage=100.0;identity=100.0;matches=777;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005951
Chr1	stalkie_big_nohaplotig	exon	14266175	14266262	100	-	.	Parent=FBgn0015359.1.mrna1;Target=FBgn0015359.1 690 777 +
Chr1	stalkie_big_nohaplotig	exon	14266327	14266921	100	-	.	Parent=FBgn0015359.1.mrna1;Target=FBgn0015359.1 95 689 +
Chr1	stalkie_big_nohaplotig	exon	14266987	14267080	100	-	.	Parent=FBgn0015359.1.mrna1;Target=FBgn0015359.1 1 94 +
Chr1	stalkie_big_nohaplotig	CDS	14266175	14266262	.	-	1	Parent=FBgn0015359.1.mrna1;Target=FBgn0015359.1 690 777 +
Chr1	stalkie_big_nohaplotig	CDS	14266327	14266921	.	-	2	Parent=FBgn0015359.1.mrna1;Target=FBgn0015359.1 95 689 +
Chr1	stalkie_big_nohaplotig	CDS	14266987	14267080	.	-	0	Parent=FBgn0015359.1.mrna1;Target=FBgn0015359.1 1 94 +
Chr1	gffcl	locus	14270159	14279725	.	.	.	ID=RLOC_00005952;geneIDs=FBgn0035321.1.path1,comp145187_c0_seq1.path1,comp151375_c0_seq1.path1,comp157467_c0_seq1.path1,comp157847_c1_seq1.path1;transcripts=comp145187_c0_seq1.mrna1,FBgn0035321.1.mrna1,comp157467_c0_seq1.mrna1,comp157847_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14270159	14278861	.	+	.	ID=comp145187_c0_seq1.mrna1;geneID=comp145187_c0_seq1.path1;Name=comp145187_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=556;mismatches=1;indels=0;unknowns=0;Target=comp145187_c0_seq1 431 556 .;locus=RLOC_00005952
Chr1	stalkie_big_nohaplotig	exon	14270159	14270692	99	+	.	Parent=comp145187_c0_seq1.mrna1;Target=comp145187_c0_seq1 24 557 -
Chr1	stalkie_big_nohaplotig	exon	14278839	14278861	100	+	.	Parent=comp145187_c0_seq1.mrna1;Target=comp145187_c0_seq1 1 23 -
Chr1	stalkie_big_nohaplotig	CDS	14270160	14270285	.	+	0	Parent=comp145187_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14274725	14279725	.	+	.	ID=FBgn0035321.1.mrna1;geneID=FBgn0035321.1.path1;Name=FBgn0035321.1;Dir=sensecoverage=100.0;identity=99.9;matches=926;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005952
Chr1	stalkie_big_nohaplotig	exon	14274725	14274923	99	+	.	Parent=FBgn0035321.1.mrna1;Target=FBgn0035321.1 1 199 +
Chr1	stalkie_big_nohaplotig	exon	14278839	14279042	100	+	.	Parent=FBgn0035321.1.mrna1;Target=FBgn0035321.1 200 403 +
Chr1	stalkie_big_nohaplotig	exon	14279138	14279501	100	+	.	Parent=FBgn0035321.1.mrna1;Target=FBgn0035321.1 404 767 +
Chr1	stalkie_big_nohaplotig	exon	14279566	14279725	100	+	.	Parent=FBgn0035321.1.mrna1;Target=FBgn0035321.1 768 927 +
Chr1	stalkie_big_nohaplotig	CDS	14274725	14274923	.	+	0	Parent=FBgn0035321.1.mrna1;Target=FBgn0035321.1 1 199 +
Chr1	stalkie_big_nohaplotig	CDS	14278839	14279042	.	+	2	Parent=FBgn0035321.1.mrna1;Target=FBgn0035321.1 200 403 +
Chr1	stalkie_big_nohaplotig	CDS	14279138	14279501	.	+	2	Parent=FBgn0035321.1.mrna1;Target=FBgn0035321.1 404 767 +
Chr1	stalkie_big_nohaplotig	CDS	14279566	14279725	.	+	1	Parent=FBgn0035321.1.mrna1;Target=FBgn0035321.1 768 927 +
Chr1	stalkie_big_nohaplotig	mRNA	14274901	14275845	.	+	.	ID=comp157467_c0_seq1.mrna1;geneID=comp157467_c0_seq1.path1;Name=comp157467_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=936;mismatches=9;indels=8;unknowns=0;Target=comp157467_c0_seq1 953 1 .;CDS_Target=comp157467_c0_seq1 322 104 .;locus=RLOC_00005952
Chr1	stalkie_big_nohaplotig	exon	14274901	14275845	98	+	.	Parent=comp157467_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14275004	14275221	.	+	0	Parent=comp157467_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14277155	14278860	.	-	.	ID=comp157847_c1_seq1.mrna1;geneID=comp157847_c1_seq1.path1;Name=comp157847_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=1691;mismatches=15;indels=16;unknowns=0;Target=comp157847_c1_seq1 1722 1 .;CDS_Target=comp157847_c1_seq1 1721 1626 .;locus=RLOC_00005952
Chr1	stalkie_big_nohaplotig	exon	14277155	14278860	98	-	.	Parent=comp157847_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14277156	14277251	.	-	0	Parent=comp157847_c1_seq1.mrna1
Chr1	gffcl	locus	14276048	14276804	.	-	.	ID=RLOC_00005953;geneIDs=comp153406_c0_seq1.path1;transcripts=comp153406_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14276048	14276804	.	-	.	ID=comp153406_c0_seq1.mrna1;geneID=comp153406_c0_seq1.path1;Name=comp153406_c0_seq1;Dir=indeterminatecoverage=98.3;identity=93.5;matches=750;mismatches=7;indels=45;unknowns=0;Target=comp153406_c0_seq1 816 15 .;CDS_Target=comp153406_c0_seq1 699 622 .;locus=RLOC_00005953
Chr1	stalkie_big_nohaplotig	exon	14276048	14276804	93	-	.	Parent=comp153406_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14276165	14276242	.	-	0	Parent=comp153406_c0_seq1.mrna1
Chr1	gffcl	locus	14280679	14353362	.	-	.	ID=RLOC_00005954;geneIDs=comp120791_c0_seq1.path1,comp153982_c0_seq1.path1,comp157070_c0_seq1.path1;transcripts=comp153982_c0_seq1.mrna1,comp157070_c0_seq1.mrna1,comp120791_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14280679	14351793	.	-	.	ID=comp153982_c0_seq1.mrna1;geneID=comp153982_c0_seq1.path1;Name=comp153982_c0_seq1;Dir=indeterminatecoverage=60.1;identity=97.6;matches=775;mismatches=11;indels=8;unknowns=0;Target=comp153982_c0_seq1 1191 961 .;locus=RLOC_00005954
Chr1	stalkie_big_nohaplotig	exon	14280679	14281400	97	-	.	Parent=comp153982_c0_seq1.mrna1;Target=comp153982_c0_seq1 1339 610 .
Chr1	stalkie_big_nohaplotig	exon	14299789	14299795	100	-	.	Parent=comp153982_c0_seq1.mrna1;Target=comp153982_c0_seq1 609 603 .
Chr1	stalkie_big_nohaplotig	exon	14307032	14307036	100	-	.	Parent=comp153982_c0_seq1.mrna1;Target=comp153982_c0_seq1 602 598 .
Chr1	stalkie_big_nohaplotig	exon	14313473	14313475	100	-	.	Parent=comp153982_c0_seq1.mrna1;Target=comp153982_c0_seq1 597 595 .
Chr1	stalkie_big_nohaplotig	exon	14327553	14327564	100	-	.	Parent=comp153982_c0_seq1.mrna1;Target=comp153982_c0_seq1 594 583 .
Chr1	stalkie_big_nohaplotig	exon	14335217	14335224	87	-	.	Parent=comp153982_c0_seq1.mrna1;Target=comp153982_c0_seq1 571 564 .
Chr1	stalkie_big_nohaplotig	exon	14347388	14347397	100	-	.	Parent=comp153982_c0_seq1.mrna1;Target=comp153982_c0_seq1 563 554 .
Chr1	stalkie_big_nohaplotig	exon	14348196	14348199	100	-	.	Parent=comp153982_c0_seq1.mrna1;Target=comp153982_c0_seq1 553 550 .
Chr1	stalkie_big_nohaplotig	exon	14350601	14350607	100	-	.	Parent=comp153982_c0_seq1.mrna1;Target=comp153982_c0_seq1 549 543 .
Chr1	stalkie_big_nohaplotig	exon	14351786	14351793	87	-	.	Parent=comp153982_c0_seq1.mrna1;Target=comp153982_c0_seq1 542 535 .
Chr1	stalkie_big_nohaplotig	CDS	14280826	14281055	.	-	0	Parent=comp153982_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14351204	14352497	.	-	.	ID=comp157070_c0_seq1.mrna1;geneID=comp157070_c0_seq1.path1;Name=comp157070_c0_seq1;Dir=antisensecoverage=98.7;identity=99.7;matches=1234;mismatches=4;indels=0;unknowns=0;locus=RLOC_00005954
Chr1	stalkie_big_nohaplotig	exon	14351204	14351852	99	-	.	Parent=comp157070_c0_seq1.mrna1;Target=comp157070_c0_seq1 17 665 -
Chr1	stalkie_big_nohaplotig	exon	14351909	14352497	99	-	.	Parent=comp157070_c0_seq1.mrna1;Target=comp157070_c0_seq1 666 1254 -
Chr1	stalkie_big_nohaplotig	CDS	14351734	14351852	.	-	2	Parent=comp157070_c0_seq1.mrna1;Target=comp157070_c0_seq1 547 665 .
Chr1	stalkie_big_nohaplotig	CDS	14351909	14352059	.	-	0	Parent=comp157070_c0_seq1.mrna1;Target=comp157070_c0_seq1 666 816 .
Chr1	stalkie_big_nohaplotig	mRNA	14352461	14353362	.	-	.	ID=comp120791_c0_seq1.mrna1;geneID=comp120791_c0_seq1.path1;Name=comp120791_c0_seq1;Dir=antisensecoverage=99.9;identity=97.2;matches=833;mismatches=7;indels=17;unknowns=0;locus=RLOC_00005954
Chr1	stalkie_big_nohaplotig	exon	14352461	14352980	95	-	.	Parent=comp120791_c0_seq1.mrna1;Target=comp120791_c0_seq1 2 522 -
Chr1	stalkie_big_nohaplotig	exon	14353035	14353362	100	-	.	Parent=comp120791_c0_seq1.mrna1;Target=comp120791_c0_seq1 523 850 -
Chr1	stalkie_big_nohaplotig	CDS	14352859	14352980	.	-	2	Parent=comp120791_c0_seq1.mrna1;Target=comp120791_c0_seq1 401 522 .
Chr1	stalkie_big_nohaplotig	CDS	14353035	14353200	.	-	0	Parent=comp120791_c0_seq1.mrna1;Target=comp120791_c0_seq1 523 688 .
Chr1	gffcl	locus	14282830	14287538	.	-	.	ID=RLOC_00005955;geneIDs=FBgn0040507.1.path1;transcripts=FBgn0040507.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14282830	14287538	.	-	.	ID=FBgn0040507.1.mrna1;geneID=FBgn0040507.1.path1;Name=FBgn0040507.1;Dir=sensecoverage=100.0;identity=99.6;matches=2351;mismatches=10;indels=0;unknowns=0;locus=RLOC_00005955
Chr1	stalkie_big_nohaplotig	exon	14282830	14283116	99	-	.	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 2075 2361 +
Chr1	stalkie_big_nohaplotig	exon	14283186	14283440	99	-	.	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 1820 2074 +
Chr1	stalkie_big_nohaplotig	exon	14283497	14283668	98	-	.	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 1648 1819 +
Chr1	stalkie_big_nohaplotig	exon	14283751	14283902	100	-	.	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 1496 1647 +
Chr1	stalkie_big_nohaplotig	exon	14284536	14284630	98	-	.	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 1401 1495 +
Chr1	stalkie_big_nohaplotig	exon	14284712	14284980	100	-	.	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 1132 1400 +
Chr1	stalkie_big_nohaplotig	exon	14285039	14285131	100	-	.	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 1039 1131 +
Chr1	stalkie_big_nohaplotig	exon	14285188	14285434	99	-	.	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 792 1038 +
Chr1	stalkie_big_nohaplotig	exon	14285510	14285725	100	-	.	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 576 791 +
Chr1	stalkie_big_nohaplotig	exon	14285793	14285920	100	-	.	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 448 575 +
Chr1	stalkie_big_nohaplotig	exon	14286650	14286700	100	-	.	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 397 447 +
Chr1	stalkie_big_nohaplotig	exon	14286770	14287055	99	-	.	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 111 396 +
Chr1	stalkie_big_nohaplotig	exon	14287429	14287538	99	-	.	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 1 110 +
Chr1	stalkie_big_nohaplotig	CDS	14282830	14283116	.	-	2	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 2075 2361 +
Chr1	stalkie_big_nohaplotig	CDS	14283186	14283440	.	-	2	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 1820 2074 +
Chr1	stalkie_big_nohaplotig	CDS	14283497	14283668	.	-	0	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 1648 1819 +
Chr1	stalkie_big_nohaplotig	CDS	14283751	14283902	.	-	2	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 1496 1647 +
Chr1	stalkie_big_nohaplotig	CDS	14284536	14284630	.	-	1	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 1401 1495 +
Chr1	stalkie_big_nohaplotig	CDS	14284712	14284980	.	-	0	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 1132 1400 +
Chr1	stalkie_big_nohaplotig	CDS	14285039	14285131	.	-	0	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 1039 1131 +
Chr1	stalkie_big_nohaplotig	CDS	14285188	14285434	.	-	1	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 792 1038 +
Chr1	stalkie_big_nohaplotig	CDS	14285510	14285725	.	-	1	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 576 791 +
Chr1	stalkie_big_nohaplotig	CDS	14285793	14285920	.	-	0	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 448 575 +
Chr1	stalkie_big_nohaplotig	CDS	14286650	14286700	.	-	0	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 397 447 +
Chr1	stalkie_big_nohaplotig	CDS	14286770	14287055	.	-	1	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 111 396 +
Chr1	stalkie_big_nohaplotig	CDS	14287429	14287538	.	-	0	Parent=FBgn0040507.1.mrna1;Target=FBgn0040507.1 1 110 +
Chr1	gffcl	locus	14291642	14291889	.	+	.	ID=RLOC_00005956;geneIDs=comp137125_c0_seq1.path1;transcripts=comp137125_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14291642	14291889	.	+	.	ID=comp137125_c0_seq1.mrna1;geneID=comp137125_c0_seq1.path1;Name=comp137125_c0_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=248;mismatches=0;indels=0;unknowns=0;Target=comp137125_c0_seq1 248 1 .;CDS_Target=comp137125_c0_seq1 119 3 .;locus=RLOC_00005956
Chr1	stalkie_big_nohaplotig	exon	14291642	14291889	100	+	.	Parent=comp137125_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14291644	14291760	.	+	0	Parent=comp137125_c0_seq1.mrna1
Chr1	gffcl	locus	14293960	14294792	.	+	.	ID=RLOC_00005957;geneIDs=FBgn0035318.1.path1;transcripts=FBgn0035318.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14293960	14294792	.	+	.	ID=FBgn0035318.1.mrna1;geneID=FBgn0035318.1.path1;Name=FBgn0035318.1;Dir=sensecoverage=100.0;identity=99.7;matches=769;mismatches=1;indels=1;unknowns=0;locus=RLOC_00005957
Chr1	stalkie_big_nohaplotig	exon	14293960	14294116	100	+	.	Parent=FBgn0035318.1.mrna1;Target=FBgn0035318.1 1 157 +
Chr1	stalkie_big_nohaplotig	exon	14294180	14294792	99	+	.	Parent=FBgn0035318.1.mrna1;Target=FBgn0035318.1 158 771 +
Chr1	stalkie_big_nohaplotig	CDS	14293960	14294116	.	+	0	Parent=FBgn0035318.1.mrna1;Target=FBgn0035318.1 1 157 +
Chr1	stalkie_big_nohaplotig	CDS	14294180	14294792	.	+	2	Parent=FBgn0035318.1.mrna1;Target=FBgn0035318.1 158 771 +
Chr1	gffcl	locus	14334085	14335618	.	+	.	ID=RLOC_00005958;geneIDs=FBgn0026593.1.path1;transcripts=FBgn0026593.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14334085	14335618	.	+	.	ID=FBgn0026593.1.mrna1;geneID=FBgn0026593.1.path1;Name=FBgn0026593.1;Dir=sensecoverage=100.0;identity=99.7;matches=1029;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005958
Chr1	stalkie_big_nohaplotig	exon	14334085	14334126	97	+	.	Parent=FBgn0026593.1.mrna1;Target=FBgn0026593.1 1 42 +
Chr1	stalkie_big_nohaplotig	exon	14334629	14335618	99	+	.	Parent=FBgn0026593.1.mrna1;Target=FBgn0026593.1 43 1032 +
Chr1	stalkie_big_nohaplotig	CDS	14334085	14334126	.	+	0	Parent=FBgn0026593.1.mrna1;Target=FBgn0026593.1 1 42 +
Chr1	stalkie_big_nohaplotig	CDS	14334629	14335618	.	+	0	Parent=FBgn0026593.1.mrna1;Target=FBgn0026593.1 43 1032 +
Chr1	gffcl	locus	14337211	14342269	.	+	.	ID=RLOC_00005959;geneIDs=FBgn0032815.1.path1;transcripts=FBgn0032815.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14337211	14342269	.	+	.	ID=FBgn0032815.1.mrna1;geneID=FBgn0032815.1.path1;Name=FBgn0032815.1;Dir=sensecoverage=100.0;identity=100.0;matches=2558;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005959
Chr1	stalkie_big_nohaplotig	exon	14337211	14337355	100	+	.	Parent=FBgn0032815.1.mrna1;Target=FBgn0032815.1 1 145 +
Chr1	stalkie_big_nohaplotig	exon	14337798	14337905	100	+	.	Parent=FBgn0032815.1.mrna1;Target=FBgn0032815.1 146 253 +
Chr1	stalkie_big_nohaplotig	exon	14339630	14339754	100	+	.	Parent=FBgn0032815.1.mrna1;Target=FBgn0032815.1 254 378 +
Chr1	stalkie_big_nohaplotig	exon	14339821	14339896	100	+	.	Parent=FBgn0032815.1.mrna1;Target=FBgn0032815.1 379 454 +
Chr1	stalkie_big_nohaplotig	exon	14339958	14340014	100	+	.	Parent=FBgn0032815.1.mrna1;Target=FBgn0032815.1 455 511 +
Chr1	stalkie_big_nohaplotig	exon	14340074	14341390	100	+	.	Parent=FBgn0032815.1.mrna1;Target=FBgn0032815.1 512 1828 +
Chr1	stalkie_big_nohaplotig	exon	14341462	14341871	100	+	.	Parent=FBgn0032815.1.mrna1;Target=FBgn0032815.1 1829 2238 +
Chr1	stalkie_big_nohaplotig	exon	14341949	14342269	99	+	.	Parent=FBgn0032815.1.mrna1;Target=FBgn0032815.1 2239 2559 +
Chr1	stalkie_big_nohaplotig	CDS	14337211	14337355	.	+	0	Parent=FBgn0032815.1.mrna1;Target=FBgn0032815.1 1 145 +
Chr1	stalkie_big_nohaplotig	CDS	14337798	14337905	.	+	2	Parent=FBgn0032815.1.mrna1;Target=FBgn0032815.1 146 253 +
Chr1	stalkie_big_nohaplotig	CDS	14339630	14339754	.	+	2	Parent=FBgn0032815.1.mrna1;Target=FBgn0032815.1 254 378 +
Chr1	stalkie_big_nohaplotig	CDS	14339821	14339896	.	+	0	Parent=FBgn0032815.1.mrna1;Target=FBgn0032815.1 379 454 +
Chr1	stalkie_big_nohaplotig	CDS	14339958	14340014	.	+	2	Parent=FBgn0032815.1.mrna1;Target=FBgn0032815.1 455 511 +
Chr1	stalkie_big_nohaplotig	CDS	14340074	14341390	.	+	2	Parent=FBgn0032815.1.mrna1;Target=FBgn0032815.1 512 1828 +
Chr1	stalkie_big_nohaplotig	CDS	14341462	14341871	.	+	2	Parent=FBgn0032815.1.mrna1;Target=FBgn0032815.1 1829 2238 +
Chr1	stalkie_big_nohaplotig	CDS	14341949	14342269	.	+	0	Parent=FBgn0032815.1.mrna1;Target=FBgn0032815.1 2239 2559 +
Chr1	gffcl	locus	14392280	14392913	.	-	.	ID=RLOC_00005960;geneIDs=comp112445_c0_seq1.path1;transcripts=comp112445_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14392280	14392913	.	-	.	ID=comp112445_c0_seq1.mrna1;geneID=comp112445_c0_seq1.path1;Name=comp112445_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.5;matches=631;mismatches=3;indels=0;unknowns=0;Target=comp112445_c0_seq1 634 1 .;CDS_Target=comp112445_c0_seq1 561 466 .;locus=RLOC_00005960
Chr1	stalkie_big_nohaplotig	exon	14392280	14392913	99	-	.	Parent=comp112445_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14392353	14392448	.	-	0	Parent=comp112445_c0_seq1.mrna1
Chr1	gffcl	locus	14407417	14407933	.	-	.	ID=RLOC_00005961;geneIDs=FBgn0000253.26.path1;transcripts=FBgn0000253.26.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14407417	14407933	.	-	.	ID=FBgn0000253.26.mrna1;geneID=FBgn0000253.26.path1;Name=FBgn0000253.26;Dir=indeterminatecoverage=99.6;identity=100.0;matches=517;mismatches=0;indels=0;unknowns=0;Target=FBgn0000253.26 519 3 .;CDS_Target=FBgn0000253.26 519 4 .;locus=RLOC_00005961
Chr1	stalkie_big_nohaplotig	exon	14407417	14407933	100	-	.	Parent=FBgn0000253.26.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14407417	14407932	.	-	0	Parent=FBgn0000253.26.mrna1
Chr1	gffcl	locus	14530074	14535488	.	-	.	ID=RLOC_00005962;geneIDs=FBgn0035300.1.path1;transcripts=FBgn0035300.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14530074	14535488	.	-	.	ID=FBgn0035300.1.mrna1;geneID=FBgn0035300.1.path1;Name=FBgn0035300.1;Dir=sensecoverage=100.0;identity=99.9;matches=1364;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005962
Chr1	stalkie_big_nohaplotig	exon	14530074	14530312	100	-	.	Parent=FBgn0035300.1.mrna1;Target=FBgn0035300.1 1127 1365 +
Chr1	stalkie_big_nohaplotig	exon	14532106	14532281	100	-	.	Parent=FBgn0035300.1.mrna1;Target=FBgn0035300.1 951 1126 +
Chr1	stalkie_big_nohaplotig	exon	14532637	14532815	100	-	.	Parent=FBgn0035300.1.mrna1;Target=FBgn0035300.1 772 950 +
Chr1	stalkie_big_nohaplotig	exon	14532885	14533015	100	-	.	Parent=FBgn0035300.1.mrna1;Target=FBgn0035300.1 641 771 +
Chr1	stalkie_big_nohaplotig	exon	14533086	14533312	100	-	.	Parent=FBgn0035300.1.mrna1;Target=FBgn0035300.1 414 640 +
Chr1	stalkie_big_nohaplotig	exon	14533598	14533719	100	-	.	Parent=FBgn0035300.1.mrna1;Target=FBgn0035300.1 292 413 +
Chr1	stalkie_big_nohaplotig	exon	14533786	14533936	99	-	.	Parent=FBgn0035300.1.mrna1;Target=FBgn0035300.1 141 291 +
Chr1	stalkie_big_nohaplotig	exon	14534002	14534115	100	-	.	Parent=FBgn0035300.1.mrna1;Target=FBgn0035300.1 27 140 +
Chr1	stalkie_big_nohaplotig	exon	14535463	14535488	100	-	.	Parent=FBgn0035300.1.mrna1;Target=FBgn0035300.1 1 26 +
Chr1	stalkie_big_nohaplotig	CDS	14530074	14530312	.	-	2	Parent=FBgn0035300.1.mrna1;Target=FBgn0035300.1 1127 1365 +
Chr1	stalkie_big_nohaplotig	CDS	14532106	14532281	.	-	1	Parent=FBgn0035300.1.mrna1;Target=FBgn0035300.1 951 1126 +
Chr1	stalkie_big_nohaplotig	CDS	14532637	14532815	.	-	0	Parent=FBgn0035300.1.mrna1;Target=FBgn0035300.1 772 950 +
Chr1	stalkie_big_nohaplotig	CDS	14532885	14533015	.	-	2	Parent=FBgn0035300.1.mrna1;Target=FBgn0035300.1 641 771 +
Chr1	stalkie_big_nohaplotig	CDS	14533086	14533312	.	-	1	Parent=FBgn0035300.1.mrna1;Target=FBgn0035300.1 414 640 +
Chr1	stalkie_big_nohaplotig	CDS	14533598	14533719	.	-	0	Parent=FBgn0035300.1.mrna1;Target=FBgn0035300.1 292 413 +
Chr1	stalkie_big_nohaplotig	CDS	14533786	14533936	.	-	1	Parent=FBgn0035300.1.mrna1;Target=FBgn0035300.1 141 291 +
Chr1	stalkie_big_nohaplotig	CDS	14534002	14534115	.	-	1	Parent=FBgn0035300.1.mrna1;Target=FBgn0035300.1 27 140 +
Chr1	stalkie_big_nohaplotig	CDS	14535463	14535488	.	-	0	Parent=FBgn0035300.1.mrna1;Target=FBgn0035300.1 1 26 +
Chr1	gffcl	locus	14539226	14545474	.	+	.	ID=RLOC_00005963;geneIDs=FBgn0027547.1.path1,comp147341_c0_seq1.path1;transcripts=FBgn0027547.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14539659	14545474	.	+	.	ID=FBgn0027547.1.mrna1;geneID=FBgn0027547.1.path1;Name=FBgn0027547.1;Dir=sensecoverage=100.0;identity=100.0;matches=666;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005963
Chr1	stalkie_big_nohaplotig	exon	14539659	14539688	100	+	.	Parent=FBgn0027547.1.mrna1;Target=FBgn0027547.1 1 30 +
Chr1	stalkie_big_nohaplotig	exon	14544775	14545095	100	+	.	Parent=FBgn0027547.1.mrna1;Target=FBgn0027547.1 31 351 +
Chr1	stalkie_big_nohaplotig	exon	14545160	14545474	100	+	.	Parent=FBgn0027547.1.mrna1;Target=FBgn0027547.1 352 666 +
Chr1	stalkie_big_nohaplotig	CDS	14539659	14539688	.	+	0	Parent=FBgn0027547.1.mrna1;Target=FBgn0027547.1 1 30 +
Chr1	stalkie_big_nohaplotig	CDS	14544775	14545095	.	+	0	Parent=FBgn0027547.1.mrna1;Target=FBgn0027547.1 31 351 +
Chr1	stalkie_big_nohaplotig	CDS	14545160	14545474	.	+	0	Parent=FBgn0027547.1.mrna1;Target=FBgn0027547.1 352 666 +
Chr1	gffcl	locus	14546142	14552862	.	.	.	ID=RLOC_00005964;geneIDs=FBgn0035298.1.path1,comp152362_c2_seq1.path1;transcripts=FBgn0035298.1.mrna1,comp152362_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14546142	14552862	.	-	.	ID=FBgn0035298.1.mrna1;geneID=FBgn0035298.1.path1;Name=FBgn0035298.1;Dir=sensecoverage=100.0;identity=99.9;matches=1565;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005964
Chr1	stalkie_big_nohaplotig	exon	14546142	14546285	100	-	.	Parent=FBgn0035298.1.mrna1;Target=FBgn0035298.1 1423 1566 +
Chr1	stalkie_big_nohaplotig	exon	14546352	14546522	100	-	.	Parent=FBgn0035298.1.mrna1;Target=FBgn0035298.1 1252 1422 +
Chr1	stalkie_big_nohaplotig	exon	14547957	14548543	100	-	.	Parent=FBgn0035298.1.mrna1;Target=FBgn0035298.1 665 1251 +
Chr1	stalkie_big_nohaplotig	exon	14548600	14548812	100	-	.	Parent=FBgn0035298.1.mrna1;Target=FBgn0035298.1 452 664 +
Chr1	stalkie_big_nohaplotig	exon	14548883	14549056	100	-	.	Parent=FBgn0035298.1.mrna1;Target=FBgn0035298.1 278 451 +
Chr1	stalkie_big_nohaplotig	exon	14549116	14549314	100	-	.	Parent=FBgn0035298.1.mrna1;Target=FBgn0035298.1 79 277 +
Chr1	stalkie_big_nohaplotig	exon	14552785	14552862	98	-	.	Parent=FBgn0035298.1.mrna1;Target=FBgn0035298.1 1 78 +
Chr1	stalkie_big_nohaplotig	CDS	14546142	14546285	.	-	0	Parent=FBgn0035298.1.mrna1;Target=FBgn0035298.1 1423 1566 +
Chr1	stalkie_big_nohaplotig	CDS	14546352	14546522	.	-	0	Parent=FBgn0035298.1.mrna1;Target=FBgn0035298.1 1252 1422 +
Chr1	stalkie_big_nohaplotig	CDS	14547957	14548543	.	-	2	Parent=FBgn0035298.1.mrna1;Target=FBgn0035298.1 665 1251 +
Chr1	stalkie_big_nohaplotig	CDS	14548600	14548812	.	-	2	Parent=FBgn0035298.1.mrna1;Target=FBgn0035298.1 452 664 +
Chr1	stalkie_big_nohaplotig	CDS	14548883	14549056	.	-	2	Parent=FBgn0035298.1.mrna1;Target=FBgn0035298.1 278 451 +
Chr1	stalkie_big_nohaplotig	CDS	14549116	14549314	.	-	0	Parent=FBgn0035298.1.mrna1;Target=FBgn0035298.1 79 277 +
Chr1	stalkie_big_nohaplotig	CDS	14552785	14552862	.	-	0	Parent=FBgn0035298.1.mrna1;Target=FBgn0035298.1 1 78 +
Chr1	stalkie_big_nohaplotig	mRNA	14546497	14546930	.	+	.	ID=comp152362_c2_seq1.mrna1;geneID=comp152362_c2_seq1.path1;Name=comp152362_c2_seq1;Dir=indeterminatecoverage=48.0;identity=98.4;matches=427;mismatches=6;indels=1;unknowns=0;Target=comp152362_c2_seq1 433 1 .;CDS_Target=comp152362_c2_seq1 324 112 .;locus=RLOC_00005964
Chr1	stalkie_big_nohaplotig	exon	14546497	14546930	98	+	.	Parent=comp152362_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14546608	14546821	.	+	0	Parent=comp152362_c2_seq1.mrna1
Chr1	gffcl	locus	14556271	14556959	.	+	.	ID=RLOC_00005965;geneIDs=FBgn0001099.1.path1;transcripts=FBgn0001099.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14556271	14556959	.	+	.	ID=FBgn0001099.1.mrna1;geneID=FBgn0001099.1.path1;Name=FBgn0001099.1;Dir=sensecoverage=100.0;identity=100.0;matches=582;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005965
Chr1	stalkie_big_nohaplotig	exon	14556271	14556413	100	+	.	Parent=FBgn0001099.1.mrna1;Target=FBgn0001099.1 1 143 +
Chr1	stalkie_big_nohaplotig	exon	14556469	14556763	100	+	.	Parent=FBgn0001099.1.mrna1;Target=FBgn0001099.1 144 438 +
Chr1	stalkie_big_nohaplotig	exon	14556816	14556959	100	+	.	Parent=FBgn0001099.1.mrna1;Target=FBgn0001099.1 439 582 +
Chr1	stalkie_big_nohaplotig	CDS	14556271	14556413	.	+	0	Parent=FBgn0001099.1.mrna1;Target=FBgn0001099.1 1 143 +
Chr1	stalkie_big_nohaplotig	CDS	14556469	14556763	.	+	1	Parent=FBgn0001099.1.mrna1;Target=FBgn0001099.1 144 438 +
Chr1	stalkie_big_nohaplotig	CDS	14556816	14556959	.	+	0	Parent=FBgn0001099.1.mrna1;Target=FBgn0001099.1 439 582 +
Chr1	gffcl	locus	14560224	14577361	.	+	.	ID=RLOC_00005966;geneIDs=FBgn0262110.1.path1,comp163551_c0_seq1.path1;transcripts=comp163551_c0_seq1.mrna1,FBgn0262110.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14560224	14577361	.	+	.	ID=comp163551_c0_seq1.mrna1;geneID=comp163551_c0_seq1.path1;Name=comp163551_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=12217;mismatches=16;indels=2;unknowns=0;locus=RLOC_00005966
Chr1	stalkie_big_nohaplotig	exon	14560224	14560795	99	+	.	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 1 571 +
Chr1	stalkie_big_nohaplotig	exon	14560863	14560939	100	+	.	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 572 648 +
Chr1	stalkie_big_nohaplotig	exon	14561619	14561766	100	+	.	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 649 796 +
Chr1	stalkie_big_nohaplotig	exon	14561860	14561970	100	+	.	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 797 907 +
Chr1	stalkie_big_nohaplotig	exon	14562028	14565175	99	+	.	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 908 4056 +
Chr1	stalkie_big_nohaplotig	exon	14566490	14567266	99	+	.	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 4057 4833 +
Chr1	stalkie_big_nohaplotig	exon	14567326	14567514	100	+	.	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 4834 5022 +
Chr1	stalkie_big_nohaplotig	exon	14569177	14569421	100	+	.	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 5023 5267 +
Chr1	stalkie_big_nohaplotig	exon	14569494	14570433	100	+	.	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 5268 6207 +
Chr1	stalkie_big_nohaplotig	exon	14570493	14570608	99	+	.	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 6208 6323 +
Chr1	stalkie_big_nohaplotig	exon	14570671	14572095	100	+	.	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 6324 7748 +
Chr1	stalkie_big_nohaplotig	exon	14572163	14572787	100	+	.	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 7749 8373 +
Chr1	stalkie_big_nohaplotig	exon	14572848	14572998	100	+	.	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 8374 8524 +
Chr1	stalkie_big_nohaplotig	exon	14573067	14573638	100	+	.	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 8525 9096 +
Chr1	stalkie_big_nohaplotig	exon	14573702	14573835	100	+	.	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 9097 9230 +
Chr1	stalkie_big_nohaplotig	exon	14573983	14574748	99	+	.	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 9231 9996 +
Chr1	stalkie_big_nohaplotig	exon	14574816	14574957	100	+	.	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 9997 10138 +
Chr1	stalkie_big_nohaplotig	exon	14575068	14575426	100	+	.	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 10139 10497 +
Chr1	stalkie_big_nohaplotig	exon	14575485	14576356	100	+	.	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 10498 11369 +
Chr1	stalkie_big_nohaplotig	exon	14576435	14576905	100	+	.	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 11370 11840 +
Chr1	stalkie_big_nohaplotig	exon	14576968	14577361	99	+	.	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 11841 12234 +
Chr1	stalkie_big_nohaplotig	CDS	14560700	14560795	.	+	0	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 476 571 +
Chr1	stalkie_big_nohaplotig	CDS	14560863	14560939	.	+	0	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 572 648 +
Chr1	stalkie_big_nohaplotig	CDS	14561619	14561766	.	+	1	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 649 796 +
Chr1	stalkie_big_nohaplotig	CDS	14561860	14561970	.	+	0	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 797 907 +
Chr1	stalkie_big_nohaplotig	CDS	14562028	14562266	.	+	0	Parent=comp163551_c0_seq1.mrna1;Target=comp163551_c0_seq1 908 1147 +
Chr1	stalkie_big_nohaplotig	mRNA	14562152	14577085	.	+	.	ID=FBgn0262110.1.mrna1;geneID=FBgn0262110.1.path1;Name=FBgn0262110.1;Dir=sensecoverage=100.0;identity=99.9;matches=10851;mismatches=14;indels=1;unknowns=0;Target=FBgn0262110.1 3 116 +;locus=RLOC_00005966
Chr1	stalkie_big_nohaplotig	exon	14562152	14565175	99	+	.	Parent=FBgn0262110.1.mrna1;Target=FBgn0262110.1 1 3025 +
Chr1	stalkie_big_nohaplotig	exon	14566490	14567266	99	+	.	Parent=FBgn0262110.1.mrna1;Target=FBgn0262110.1 3026 3802 +
Chr1	stalkie_big_nohaplotig	exon	14567326	14567514	100	+	.	Parent=FBgn0262110.1.mrna1;Target=FBgn0262110.1 3803 3991 +
Chr1	stalkie_big_nohaplotig	exon	14569177	14569421	100	+	.	Parent=FBgn0262110.1.mrna1;Target=FBgn0262110.1 3992 4236 +
Chr1	stalkie_big_nohaplotig	exon	14569494	14570433	100	+	.	Parent=FBgn0262110.1.mrna1;Target=FBgn0262110.1 4237 5176 +
Chr1	stalkie_big_nohaplotig	exon	14570493	14570608	99	+	.	Parent=FBgn0262110.1.mrna1;Target=FBgn0262110.1 5177 5292 +
Chr1	stalkie_big_nohaplotig	exon	14570671	14572095	100	+	.	Parent=FBgn0262110.1.mrna1;Target=FBgn0262110.1 5293 6717 +
Chr1	stalkie_big_nohaplotig	exon	14572163	14572552	100	+	.	Parent=FBgn0262110.1.mrna1;Target=FBgn0262110.1 6718 7107 +
Chr1	stalkie_big_nohaplotig	exon	14572614	14572787	100	+	.	Parent=FBgn0262110.1.mrna1;Target=FBgn0262110.1 7108 7281 +
Chr1	stalkie_big_nohaplotig	exon	14572848	14572998	100	+	.	Parent=FBgn0262110.1.mrna1;Target=FBgn0262110.1 7282 7432 +
Chr1	stalkie_big_nohaplotig	exon	14573067	14573638	100	+	.	Parent=FBgn0262110.1.mrna1;Target=FBgn0262110.1 7433 8004 +
Chr1	stalkie_big_nohaplotig	exon	14573702	14573835	100	+	.	Parent=FBgn0262110.1.mrna1;Target=FBgn0262110.1 8005 8138 +
Chr1	stalkie_big_nohaplotig	exon	14573983	14574748	99	+	.	Parent=FBgn0262110.1.mrna1;Target=FBgn0262110.1 8139 8904 +
Chr1	stalkie_big_nohaplotig	exon	14574816	14574957	100	+	.	Parent=FBgn0262110.1.mrna1;Target=FBgn0262110.1 8905 9046 +
Chr1	stalkie_big_nohaplotig	exon	14575068	14575426	100	+	.	Parent=FBgn0262110.1.mrna1;Target=FBgn0262110.1 9047 9405 +
Chr1	stalkie_big_nohaplotig	exon	14575485	14576356	100	+	.	Parent=FBgn0262110.1.mrna1;Target=FBgn0262110.1 9406 10277 +
Chr1	stalkie_big_nohaplotig	exon	14576435	14576905	100	+	.	Parent=FBgn0262110.1.mrna1;Target=FBgn0262110.1 10278 10748 +
Chr1	stalkie_big_nohaplotig	exon	14576968	14577085	99	+	.	Parent=FBgn0262110.1.mrna1;Target=FBgn0262110.1 10749 10866 +
Chr1	stalkie_big_nohaplotig	CDS	14562154	14562266	.	+	0	Parent=FBgn0262110.1.mrna1
Chr1	gffcl	locus	14577511	14580088	.	-	.	ID=RLOC_00005968;geneIDs=FBgn0035295.1.path1;transcripts=FBgn0035295.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14577511	14580088	.	-	.	ID=FBgn0035295.1.mrna1;geneID=FBgn0035295.1.path1;Name=FBgn0035295.1;Dir=sensecoverage=100.0;identity=99.9;matches=2200;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005968
Chr1	stalkie_big_nohaplotig	exon	14577511	14577645	99	-	.	Parent=FBgn0035295.1.mrna1;Target=FBgn0035295.1 2068 2202 +
Chr1	stalkie_big_nohaplotig	exon	14577698	14577980	100	-	.	Parent=FBgn0035295.1.mrna1;Target=FBgn0035295.1 1785 2067 +
Chr1	stalkie_big_nohaplotig	exon	14578080	14578417	100	-	.	Parent=FBgn0035295.1.mrna1;Target=FBgn0035295.1 1447 1784 +
Chr1	stalkie_big_nohaplotig	exon	14578469	14578630	100	-	.	Parent=FBgn0035295.1.mrna1;Target=FBgn0035295.1 1285 1446 +
Chr1	stalkie_big_nohaplotig	exon	14578681	14578831	100	-	.	Parent=FBgn0035295.1.mrna1;Target=FBgn0035295.1 1134 1284 +
Chr1	stalkie_big_nohaplotig	exon	14578895	14579071	100	-	.	Parent=FBgn0035295.1.mrna1;Target=FBgn0035295.1 957 1133 +
Chr1	stalkie_big_nohaplotig	exon	14579133	14580088	99	-	.	Parent=FBgn0035295.1.mrna1;Target=FBgn0035295.1 1 956 +
Chr1	stalkie_big_nohaplotig	CDS	14577511	14577645	.	-	0	Parent=FBgn0035295.1.mrna1;Target=FBgn0035295.1 2068 2202 +
Chr1	stalkie_big_nohaplotig	CDS	14577698	14577980	.	-	1	Parent=FBgn0035295.1.mrna1;Target=FBgn0035295.1 1785 2067 +
Chr1	stalkie_big_nohaplotig	CDS	14578080	14578417	.	-	0	Parent=FBgn0035295.1.mrna1;Target=FBgn0035295.1 1447 1784 +
Chr1	stalkie_big_nohaplotig	CDS	14578469	14578630	.	-	0	Parent=FBgn0035295.1.mrna1;Target=FBgn0035295.1 1285 1446 +
Chr1	stalkie_big_nohaplotig	CDS	14578681	14578831	.	-	1	Parent=FBgn0035295.1.mrna1;Target=FBgn0035295.1 1134 1284 +
Chr1	stalkie_big_nohaplotig	CDS	14578895	14579071	.	-	1	Parent=FBgn0035295.1.mrna1;Target=FBgn0035295.1 957 1133 +
Chr1	stalkie_big_nohaplotig	CDS	14579133	14580088	.	-	0	Parent=FBgn0035295.1.mrna1;Target=FBgn0035295.1 1 956 +
Chr1	gffcl	locus	14588455	14590104	.	+	.	ID=RLOC_00005969;geneIDs=FBgn0250814.1.path1;transcripts=FBgn0250814.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14588455	14590104	.	+	.	ID=FBgn0250814.1.mrna1;geneID=FBgn0250814.1.path1;Name=FBgn0250814.1;Dir=sensecoverage=100.0;identity=100.0;matches=1341;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005969
Chr1	stalkie_big_nohaplotig	exon	14588455	14588508	100	+	.	Parent=FBgn0250814.1.mrna1;Target=FBgn0250814.1 1 54 +
Chr1	stalkie_big_nohaplotig	exon	14588646	14588785	100	+	.	Parent=FBgn0250814.1.mrna1;Target=FBgn0250814.1 55 194 +
Chr1	stalkie_big_nohaplotig	exon	14588850	14589153	100	+	.	Parent=FBgn0250814.1.mrna1;Target=FBgn0250814.1 195 498 +
Chr1	stalkie_big_nohaplotig	exon	14589210	14589746	100	+	.	Parent=FBgn0250814.1.mrna1;Target=FBgn0250814.1 499 1035 +
Chr1	stalkie_big_nohaplotig	exon	14589799	14590104	100	+	.	Parent=FBgn0250814.1.mrna1;Target=FBgn0250814.1 1036 1341 +
Chr1	stalkie_big_nohaplotig	CDS	14588455	14588508	.	+	0	Parent=FBgn0250814.1.mrna1;Target=FBgn0250814.1 1 54 +
Chr1	stalkie_big_nohaplotig	CDS	14588646	14588785	.	+	0	Parent=FBgn0250814.1.mrna1;Target=FBgn0250814.1 55 194 +
Chr1	stalkie_big_nohaplotig	CDS	14588850	14589153	.	+	1	Parent=FBgn0250814.1.mrna1;Target=FBgn0250814.1 195 498 +
Chr1	stalkie_big_nohaplotig	CDS	14589210	14589746	.	+	0	Parent=FBgn0250814.1.mrna1;Target=FBgn0250814.1 499 1035 +
Chr1	stalkie_big_nohaplotig	CDS	14589799	14590104	.	+	0	Parent=FBgn0250814.1.mrna1;Target=FBgn0250814.1 1036 1341 +
Chr1	gffcl	locus	14590536	14591908	.	.	.	ID=RLOC_00005970;geneIDs=FBgn0036643.1.path1,comp144337_c0_seq1.path1;transcripts=FBgn0036643.1.mrna1,comp144337_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14590536	14591908	.	-	.	ID=FBgn0036643.1.mrna1;geneID=FBgn0036643.1.path1;Name=FBgn0036643.1;Dir=sensecoverage=100.0;identity=99.5;matches=663;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005970
Chr1	stalkie_big_nohaplotig	exon	14590536	14590594	100	-	.	Parent=FBgn0036643.1.mrna1;Target=FBgn0036643.1 608 666 +
Chr1	stalkie_big_nohaplotig	exon	14591106	14591207	99	-	.	Parent=FBgn0036643.1.mrna1;Target=FBgn0036643.1 506 607 +
Chr1	stalkie_big_nohaplotig	exon	14591273	14591553	99	-	.	Parent=FBgn0036643.1.mrna1;Target=FBgn0036643.1 225 505 +
Chr1	stalkie_big_nohaplotig	exon	14591607	14591801	100	-	.	Parent=FBgn0036643.1.mrna1;Target=FBgn0036643.1 30 224 +
Chr1	stalkie_big_nohaplotig	exon	14591880	14591908	96	-	.	Parent=FBgn0036643.1.mrna1;Target=FBgn0036643.1 1 29 +
Chr1	stalkie_big_nohaplotig	CDS	14590536	14590594	.	-	2	Parent=FBgn0036643.1.mrna1;Target=FBgn0036643.1 608 666 +
Chr1	stalkie_big_nohaplotig	CDS	14591106	14591207	.	-	2	Parent=FBgn0036643.1.mrna1;Target=FBgn0036643.1 506 607 +
Chr1	stalkie_big_nohaplotig	CDS	14591273	14591553	.	-	1	Parent=FBgn0036643.1.mrna1;Target=FBgn0036643.1 225 505 +
Chr1	stalkie_big_nohaplotig	CDS	14591607	14591801	.	-	1	Parent=FBgn0036643.1.mrna1;Target=FBgn0036643.1 30 224 +
Chr1	stalkie_big_nohaplotig	CDS	14591880	14591908	.	-	0	Parent=FBgn0036643.1.mrna1;Target=FBgn0036643.1 1 29 +
Chr1	stalkie_big_nohaplotig	mRNA	14590572	14591128	.	+	.	ID=comp144337_c0_seq1.mrna1;geneID=comp144337_c0_seq1.path1;Name=comp144337_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=556;mismatches=1;indels=2;unknowns=0;Target=comp144337_c0_seq1 559 1 .;CDS_Target=comp144337_c0_seq1 496 269 .;locus=RLOC_00005970
Chr1	stalkie_big_nohaplotig	exon	14590572	14591128	99	+	.	Parent=comp144337_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14590840	14591065	.	+	0	Parent=comp144337_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14612414	14613328	.	+	.	ID=comp145822_c0_seq1.mrna1;geneID=comp145822_c0_seq1.path1;Name=comp145822_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=855;mismatches=1;indels=0;unknowns=0;Target=comp145822_c0_seq1 170 259 +;locus=RLOC_00005971
Chr1	stalkie_big_nohaplotig	exon	14612414	14613245	99	+	.	Parent=comp145822_c0_seq1.mrna1;Target=comp145822_c0_seq1 1 832 +
Chr1	stalkie_big_nohaplotig	exon	14613305	14613328	100	+	.	Parent=comp145822_c0_seq1.mrna1;Target=comp145822_c0_seq1 833 856 +
Chr1	stalkie_big_nohaplotig	CDS	14612583	14612672	.	+	0	Parent=comp145822_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14618539	14619051	.	-	.	ID=comp209265_c0_seq1.mrna1;geneID=comp209265_c0_seq1.path1;Name=comp209265_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=512;mismatches=1;indels=0;unknowns=0;Target=comp209265_c0_seq1 513 1 .;CDS_Target=comp209265_c0_seq1 92 3 .;locus=RLOC_00005971
Chr1	stalkie_big_nohaplotig	exon	14618539	14619051	99	-	.	Parent=comp209265_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14618960	14619049	.	-	0	Parent=comp209265_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14622987	14625595	.	-	.	ID=comp159400_c0_seq1.mrna1;geneID=comp159400_c0_seq1.path1;Name=comp159400_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=2598;mismatches=11;indels=4;unknowns=0;Target=comp159400_c0_seq1 2613 1 .;CDS_Target=comp159400_c0_seq1 2181 1957 .;locus=RLOC_00005971
Chr1	stalkie_big_nohaplotig	exon	14622987	14625595	99	-	.	Parent=comp159400_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14623419	14623643	.	-	0	Parent=comp159400_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14626154	14626667	.	-	.	ID=comp134824_c0_seq1.mrna1;geneID=comp134824_c0_seq1.path1;Name=comp134824_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=512;mismatches=1;indels=1;unknowns=0;Target=comp134824_c0_seq1 513 1 .;CDS_Target=comp134824_c0_seq1 80 3 .;locus=RLOC_00005971
Chr1	stalkie_big_nohaplotig	exon	14626154	14626667	99	-	.	Parent=comp134824_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14626588	14626665	.	-	0	Parent=comp134824_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14627671	14628666	.	-	.	ID=comp156004_c0_seq1.mrna1;geneID=comp156004_c0_seq1.path1;Name=comp156004_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=995;mismatches=1;indels=2;unknowns=0;Target=comp156004_c0_seq1 998 1 .;CDS_Target=comp156004_c0_seq1 799 632 .;locus=RLOC_00005971
Chr1	stalkie_big_nohaplotig	exon	14627671	14628666	99	-	.	Parent=comp156004_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14627868	14628035	.	-	0	Parent=comp156004_c0_seq1.mrna1
Chr1	gffcl	locus	14594735	14602037	.	-	.	ID=RLOC_00005972;geneIDs=comp157174_c0_seq1.path1;transcripts=comp157174_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14594735	14602037	.	-	.	ID=comp157174_c0_seq1.mrna1;geneID=comp157174_c0_seq1.path1;Name=comp157174_c0_seq1;Dir=antisensecoverage=98.7;identity=99.6;matches=1728;mismatches=7;indels=0;unknowns=0;Target=comp157174_c0_seq1 239 454 .;locus=RLOC_00005972
Chr1	stalkie_big_nohaplotig	exon	14594735	14595899	99	-	.	Parent=comp157174_c0_seq1.mrna1;Target=comp157174_c0_seq1 1 1165 -
Chr1	stalkie_big_nohaplotig	exon	14601468	14602037	99	-	.	Parent=comp157174_c0_seq1.mrna1;Target=comp157174_c0_seq1 1166 1735 -
Chr1	stalkie_big_nohaplotig	CDS	14594973	14595188	.	-	0	Parent=comp157174_c0_seq1.mrna1
Chr1	gffcl	locus	14609704	14610119	.	-	.	ID=RLOC_00005973;geneIDs=comp76059_c0_seq1.path1;transcripts=comp76059_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14609704	14610119	.	-	.	ID=comp76059_c0_seq1.mrna1;geneID=comp76059_c0_seq1.path1;Name=comp76059_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=416;mismatches=0;indels=0;unknowns=0;Target=comp76059_c0_seq1 416 1 .;CDS_Target=comp76059_c0_seq1 340 200 .;locus=RLOC_00005973
Chr1	stalkie_big_nohaplotig	exon	14609704	14610119	100	-	.	Parent=comp76059_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14609780	14609920	.	-	0	Parent=comp76059_c0_seq1.mrna1
Chr1	gffcl	locus	14610930	14611760	.	-	.	ID=RLOC_00005974;geneIDs=comp148100_c0_seq1.path1;transcripts=comp148100_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14610930	14611760	.	-	.	ID=comp148100_c0_seq1.mrna1;geneID=comp148100_c0_seq1.path1;Name=comp148100_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.5;matches=827;mismatches=4;indels=0;unknowns=0;Target=comp148100_c0_seq1 831 1 .;CDS_Target=comp148100_c0_seq1 100 2 .;locus=RLOC_00005974
Chr1	stalkie_big_nohaplotig	exon	14610930	14611760	99	-	.	Parent=comp148100_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14611661	14611759	.	-	0	Parent=comp148100_c0_seq1.mrna1
Chr1	gffcl	locus	14616136	14618316	.	+	.	ID=RLOC_00005975;geneIDs=comp154342_c0_seq1.path1;transcripts=comp154342_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14616136	14618316	.	+	.	ID=comp154342_c0_seq1.mrna1;geneID=comp154342_c0_seq1.path1;Name=comp154342_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.4;matches=2169;mismatches=6;indels=8;unknowns=0;Target=comp154342_c0_seq1 2204 28 .;CDS_Target=comp154342_c0_seq1 992 822 .;locus=RLOC_00005975
Chr1	stalkie_big_nohaplotig	exon	14616136	14618316	99	+	.	Parent=comp154342_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14616934	14617104	.	+	0	Parent=comp154342_c0_seq1.mrna1
Chr1	gffcl	locus	14629361	14630737	.	+	.	ID=RLOC_00005976;geneIDs=comp154577_c0_seq1.path1;transcripts=comp154577_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14629361	14630737	.	+	.	ID=comp154577_c0_seq1.mrna1;geneID=comp154577_c0_seq1.path1;Name=comp154577_c0_seq1;Dir=indeterminatecoverage=99.0;identity=95.9;matches=1348;mismatches=5;indels=52;unknowns=0;Target=comp154577_c0_seq1 1381 1 .;CDS_Target=comp154577_c0_seq1 1217 1131 .;locus=RLOC_00005976
Chr1	stalkie_big_nohaplotig	exon	14629361	14630737	95	+	.	Parent=comp154577_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14630463	14630573	.	+	0	Parent=comp154577_c0_seq1.mrna1
Chr1	gffcl	locus	14631154	14634537	.	-	.	ID=RLOC_00005977;geneIDs=comp162497_c1_seq1.path1;transcripts=comp162497_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14631154	14634537	.	-	.	ID=comp162497_c1_seq1.mrna1;geneID=comp162497_c1_seq1.path1;Name=comp162497_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=3381;mismatches=3;indels=17;unknowns=0;Target=comp162497_c1_seq1 3401 1 .;CDS_Target=comp162497_c1_seq1 1288 1172 .;locus=RLOC_00005977
Chr1	stalkie_big_nohaplotig	exon	14631154	14634537	99	-	.	Parent=comp162497_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14633250	14633366	.	-	0	Parent=comp162497_c1_seq1.mrna1
Chr1	gffcl	locus	14636096	14636421	.	+	.	ID=RLOC_00005978;geneIDs=comp89942_c0_seq1.path1;transcripts=comp89942_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14636096	14636421	.	+	.	ID=comp89942_c0_seq1.mrna1;geneID=comp89942_c0_seq1.path1;Name=comp89942_c0_seq1;Dir=indeterminatecoverage=98.5;identity=100.0;matches=326;mismatches=0;indels=0;unknowns=0;Target=comp89942_c0_seq1 326 1 .;CDS_Target=comp89942_c0_seq1 79 2 .;locus=RLOC_00005978
Chr1	stalkie_big_nohaplotig	exon	14636096	14636421	100	+	.	Parent=comp89942_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14636097	14636174	.	+	0	Parent=comp89942_c0_seq1.mrna1
Chr1	gffcl	locus	14648684	14652006	.	-	.	ID=RLOC_00005979;geneIDs=FBgn0043806.1.path1;transcripts=FBgn0043806.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14648684	14652006	.	-	.	ID=FBgn0043806.1.mrna1;geneID=FBgn0043806.1.path1;Name=FBgn0043806.1;Dir=sensecoverage=100.0;identity=99.8;matches=916;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005979
Chr1	stalkie_big_nohaplotig	exon	14648684	14648839	98	-	.	Parent=FBgn0043806.1.mrna1;Target=FBgn0043806.1 763 918 +
Chr1	stalkie_big_nohaplotig	exon	14648901	14649299	100	-	.	Parent=FBgn0043806.1.mrna1;Target=FBgn0043806.1 364 762 +
Chr1	stalkie_big_nohaplotig	exon	14649390	14649500	100	-	.	Parent=FBgn0043806.1.mrna1;Target=FBgn0043806.1 253 363 +
Chr1	stalkie_big_nohaplotig	exon	14651755	14652006	100	-	.	Parent=FBgn0043806.1.mrna1;Target=FBgn0043806.1 1 252 +
Chr1	stalkie_big_nohaplotig	CDS	14648684	14648839	.	-	0	Parent=FBgn0043806.1.mrna1;Target=FBgn0043806.1 763 918 +
Chr1	stalkie_big_nohaplotig	CDS	14648901	14649299	.	-	0	Parent=FBgn0043806.1.mrna1;Target=FBgn0043806.1 364 762 +
Chr1	stalkie_big_nohaplotig	CDS	14649390	14649500	.	-	0	Parent=FBgn0043806.1.mrna1;Target=FBgn0043806.1 253 363 +
Chr1	stalkie_big_nohaplotig	CDS	14651755	14652006	.	-	0	Parent=FBgn0043806.1.mrna1;Target=FBgn0043806.1 1 252 +
Chr1	gffcl	locus	14657244	14658642	.	.	.	ID=RLOC_00005980;geneIDs=FBgn0000116.1.path1,comp144910_c0_seq1.path1;transcripts=FBgn0000116.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14657244	14658324	.	-	.	ID=FBgn0000116.1.mrna1;geneID=FBgn0000116.1.path1;Name=FBgn0000116.1;Dir=indeterminatecoverage=97.7;identity=99.9;matches=1080;mismatches=1;indels=0;unknowns=0;Target=FBgn0000116.1 1107 27 .;CDS_Target=FBgn0000116.1 1107 28 .;locus=RLOC_00005980
Chr1	stalkie_big_nohaplotig	exon	14657244	14658324	99	-	.	Parent=FBgn0000116.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14657244	14658323	.	-	0	Parent=FBgn0000116.1.mrna1
Chr1	gffcl	locus	14666662	14668711	.	+	.	ID=RLOC_00005981;geneIDs=comp159107_c0_seq1.path1;transcripts=comp159107_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14666662	14668711	.	+	.	ID=comp159107_c0_seq1.mrna1;geneID=comp159107_c0_seq1.path1;Name=comp159107_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=2021;mismatches=16;indels=23;unknowns=0;Target=comp159107_c0_seq1 2047 1 .;CDS_Target=comp159107_c0_seq1 1380 1159 .;locus=RLOC_00005981
Chr1	stalkie_big_nohaplotig	exon	14666662	14668711	98	+	.	Parent=comp159107_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14667830	14668045	.	+	0	Parent=comp159107_c0_seq1.mrna1
Chr1	gffcl	locus	14675601	14676317	.	-	.	ID=RLOC_00005982;geneIDs=comp139719_c2_seq1.path1;transcripts=comp139719_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14675601	14676317	.	-	.	ID=comp139719_c2_seq1.mrna1;geneID=comp139719_c2_seq1.path1;Name=comp139719_c2_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=705;mismatches=6;indels=18;unknowns=0;Target=comp139719_c2_seq1 723 1 .;CDS_Target=comp139719_c2_seq1 70 2 .;locus=RLOC_00005982
Chr1	stalkie_big_nohaplotig	exon	14675601	14676317	96	-	.	Parent=comp139719_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14676248	14676316	.	-	0	Parent=comp139719_c2_seq1.mrna1
Chr1	gffcl	locus	14686923	14687857	.	-	.	ID=RLOC_00005983;geneIDs=comp150134_c0_seq1.path1;transcripts=comp150134_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14686923	14687857	.	-	.	ID=comp150134_c0_seq1.mrna1;geneID=comp150134_c0_seq1.path1;Name=comp150134_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=751;mismatches=2;indels=0;unknowns=0;Target=comp150134_c0_seq1 170 442 +;locus=RLOC_00005983
Chr1	stalkie_big_nohaplotig	exon	14686923	14687652	99	-	.	Parent=comp150134_c0_seq1.mrna1;Target=comp150134_c0_seq1 24 753 +
Chr1	stalkie_big_nohaplotig	exon	14687835	14687857	100	-	.	Parent=comp150134_c0_seq1.mrna1;Target=comp150134_c0_seq1 1 23 +
Chr1	stalkie_big_nohaplotig	CDS	14687234	14687506	.	-	0	Parent=comp150134_c0_seq1.mrna1
Chr1	gffcl	locus	14690074	14690409	.	-	.	ID=RLOC_00005984;geneIDs=comp90653_c0_seq1.path1;transcripts=comp90653_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14690074	14690409	.	-	.	ID=comp90653_c0_seq1.mrna1;geneID=comp90653_c0_seq1.path1;Name=comp90653_c0_seq1;Dir=indeterminatecoverage=100.0;identity=87.5;matches=336;mismatches=0;indels=48;unknowns=0;Target=comp90653_c0_seq1 384 1 .;CDS_Target=comp90653_c0_seq1 224 3 .;locus=RLOC_00005984
Chr1	stalkie_big_nohaplotig	exon	14690074	14690409	87	-	.	Parent=comp90653_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14690186	14690407	.	-	0	Parent=comp90653_c0_seq1.mrna1
Chr1	gffcl	locus	14701612	14705725	.	-	.	ID=RLOC_00005985;geneIDs=comp64257_c0_seq1.path1,comp113894_c0_seq1.path1,comp156858_c1_seq1.path1;transcripts=comp156858_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14703161	14705725	.	-	.	ID=comp156858_c1_seq1.mrna1;geneID=comp156858_c1_seq1.path1;Name=comp156858_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=2559;mismatches=6;indels=5;unknowns=0;Target=comp156858_c1_seq1 2570 1 .;CDS_Target=comp156858_c1_seq1 340 212 .;locus=RLOC_00005985
Chr1	stalkie_big_nohaplotig	exon	14703161	14705725	99	-	.	Parent=comp156858_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14705386	14705514	.	-	0	Parent=comp156858_c1_seq1.mrna1
Chr1	gffcl	locus	14706323	14708199	.	+	.	ID=RLOC_00005986;geneIDs=comp154413_c2_seq1.path1;transcripts=comp154413_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14706323	14708199	.	+	.	ID=comp154413_c2_seq1.mrna1;geneID=comp154413_c2_seq1.path1;Name=comp154413_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1869;mismatches=1;indels=9;unknowns=0;Target=comp154413_c2_seq1 1872 1 .;CDS_Target=comp154413_c2_seq1 124 2 .;locus=RLOC_00005986
Chr1	stalkie_big_nohaplotig	exon	14706323	14708199	99	+	.	Parent=comp154413_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14706324	14706446	.	+	0	Parent=comp154413_c2_seq1.mrna1
Chr1	gffcl	locus	14708640	14709508	.	+	.	ID=RLOC_00005987;geneIDs=comp266467_c0_seq1.path1;transcripts=comp266467_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14708640	14709508	.	+	.	ID=comp266467_c0_seq1.mrna1;geneID=comp266467_c0_seq1.path1;Name=comp266467_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=868;mismatches=1;indels=0;unknowns=0;Target=comp266467_c0_seq1 869 1 .;CDS_Target=comp266467_c0_seq1 121 2 .;locus=RLOC_00005987
Chr1	stalkie_big_nohaplotig	exon	14708640	14709508	99	+	.	Parent=comp266467_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14708641	14708760	.	+	0	Parent=comp266467_c0_seq1.mrna1
Chr1	gffcl	locus	14709847	14714671	.	-	.	ID=RLOC_00005988;geneIDs=FBgn0035959.1.path1;transcripts=FBgn0035959.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14709847	14714671	.	-	.	ID=FBgn0035959.1.mrna1;geneID=FBgn0035959.1.path1;Name=FBgn0035959.1;Dir=sensecoverage=100.0;identity=99.9;matches=1358;mismatches=1;indels=0;unknowns=0;locus=RLOC_00005988
Chr1	stalkie_big_nohaplotig	exon	14709847	14709984	100	-	.	Parent=FBgn0035959.1.mrna1;Target=FBgn0035959.1 1222 1359 +
Chr1	stalkie_big_nohaplotig	exon	14710045	14710281	100	-	.	Parent=FBgn0035959.1.mrna1;Target=FBgn0035959.1 985 1221 +
Chr1	stalkie_big_nohaplotig	exon	14710578	14710652	100	-	.	Parent=FBgn0035959.1.mrna1;Target=FBgn0035959.1 910 984 +
Chr1	stalkie_big_nohaplotig	exon	14711951	14712123	100	-	.	Parent=FBgn0035959.1.mrna1;Target=FBgn0035959.1 737 909 +
Chr1	stalkie_big_nohaplotig	exon	14712179	14712278	100	-	.	Parent=FBgn0035959.1.mrna1;Target=FBgn0035959.1 637 736 +
Chr1	stalkie_big_nohaplotig	exon	14712355	14712586	99	-	.	Parent=FBgn0035959.1.mrna1;Target=FBgn0035959.1 405 636 +
Chr1	stalkie_big_nohaplotig	exon	14712665	14712769	100	-	.	Parent=FBgn0035959.1.mrna1;Target=FBgn0035959.1 300 404 +
Chr1	stalkie_big_nohaplotig	exon	14712860	14713015	100	-	.	Parent=FBgn0035959.1.mrna1;Target=FBgn0035959.1 144 299 +
Chr1	stalkie_big_nohaplotig	exon	14714529	14714671	100	-	.	Parent=FBgn0035959.1.mrna1;Target=FBgn0035959.1 1 143 +
Chr1	stalkie_big_nohaplotig	CDS	14709847	14709984	.	-	0	Parent=FBgn0035959.1.mrna1;Target=FBgn0035959.1 1222 1359 +
Chr1	stalkie_big_nohaplotig	CDS	14710045	14710281	.	-	0	Parent=FBgn0035959.1.mrna1;Target=FBgn0035959.1 985 1221 +
Chr1	stalkie_big_nohaplotig	CDS	14710578	14710652	.	-	0	Parent=FBgn0035959.1.mrna1;Target=FBgn0035959.1 910 984 +
Chr1	stalkie_big_nohaplotig	CDS	14711951	14712123	.	-	2	Parent=FBgn0035959.1.mrna1;Target=FBgn0035959.1 737 909 +
Chr1	stalkie_big_nohaplotig	CDS	14712179	14712278	.	-	0	Parent=FBgn0035959.1.mrna1;Target=FBgn0035959.1 637 736 +
Chr1	stalkie_big_nohaplotig	CDS	14712355	14712586	.	-	1	Parent=FBgn0035959.1.mrna1;Target=FBgn0035959.1 405 636 +
Chr1	stalkie_big_nohaplotig	CDS	14712665	14712769	.	-	1	Parent=FBgn0035959.1.mrna1;Target=FBgn0035959.1 300 404 +
Chr1	stalkie_big_nohaplotig	CDS	14712860	14713015	.	-	1	Parent=FBgn0035959.1.mrna1;Target=FBgn0035959.1 144 299 +
Chr1	stalkie_big_nohaplotig	CDS	14714529	14714671	.	-	0	Parent=FBgn0035959.1.mrna1;Target=FBgn0035959.1 1 143 +
Chr1	gffcl	locus	14717580	14718921	.	+	.	ID=RLOC_00005989;geneIDs=FBgn0035960.1.path1;transcripts=FBgn0035960.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14717580	14718921	.	+	.	ID=FBgn0035960.1.mrna1;geneID=FBgn0035960.1.path1;Name=FBgn0035960.1;Dir=sensecoverage=100.0;identity=100.0;matches=1155;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005989
Chr1	stalkie_big_nohaplotig	exon	14717580	14718068	100	+	.	Parent=FBgn0035960.1.mrna1;Target=FBgn0035960.1 1 489 +
Chr1	stalkie_big_nohaplotig	exon	14718129	14718404	100	+	.	Parent=FBgn0035960.1.mrna1;Target=FBgn0035960.1 490 765 +
Chr1	stalkie_big_nohaplotig	exon	14718465	14718575	100	+	.	Parent=FBgn0035960.1.mrna1;Target=FBgn0035960.1 766 876 +
Chr1	stalkie_big_nohaplotig	exon	14718643	14718921	100	+	.	Parent=FBgn0035960.1.mrna1;Target=FBgn0035960.1 877 1155 +
Chr1	stalkie_big_nohaplotig	CDS	14717580	14718068	.	+	0	Parent=FBgn0035960.1.mrna1;Target=FBgn0035960.1 1 489 +
Chr1	stalkie_big_nohaplotig	CDS	14718129	14718404	.	+	0	Parent=FBgn0035960.1.mrna1;Target=FBgn0035960.1 490 765 +
Chr1	stalkie_big_nohaplotig	CDS	14718465	14718575	.	+	0	Parent=FBgn0035960.1.mrna1;Target=FBgn0035960.1 766 876 +
Chr1	stalkie_big_nohaplotig	CDS	14718643	14718921	.	+	0	Parent=FBgn0035960.1.mrna1;Target=FBgn0035960.1 877 1155 +
Chr1	gffcl	locus	14722249	14733878	.	.	.	ID=RLOC_00005991;geneIDs=FBgn0023479.1.path1,comp131033_c0_seq1.path1,comp137336_c0_seq1.path1;transcripts=comp131033_c0_seq1.mrna1,FBgn0023479.1.mrna1,comp137336_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14722249	14724715	.	+	.	ID=comp131033_c0_seq1.mrna1;geneID=comp131033_c0_seq1.path1;Name=comp131033_c0_seq1;Dir=sensecoverage=99.9;identity=99.7;matches=679;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005991
Chr1	stalkie_big_nohaplotig	exon	14722249	14722833	99	+	.	Parent=comp131033_c0_seq1.mrna1;Target=comp131033_c0_seq1 2 586 +
Chr1	stalkie_big_nohaplotig	exon	14724620	14724715	100	+	.	Parent=comp131033_c0_seq1.mrna1;Target=comp131033_c0_seq1 587 682 +
Chr1	stalkie_big_nohaplotig	CDS	14722723	14722833	.	+	0	Parent=comp131033_c0_seq1.mrna1;Target=comp131033_c0_seq1 476 586 +
Chr1	stalkie_big_nohaplotig	CDS	14724620	14724715	.	+	0	Parent=comp131033_c0_seq1.mrna1;Target=comp131033_c0_seq1 587 682 +
Chr1	stalkie_big_nohaplotig	mRNA	14724701	14733878	.	+	.	ID=FBgn0023479.1.mrna1;geneID=FBgn0023479.1.path1;Name=FBgn0023479.1;Dir=sensecoverage=100.0;identity=100.0;matches=6012;mismatches=3;indels=0;unknowns=0;locus=RLOC_00005991
Chr1	stalkie_big_nohaplotig	exon	14724701	14724923	100	+	.	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 1 223 +
Chr1	stalkie_big_nohaplotig	exon	14725776	14726249	100	+	.	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 224 697 +
Chr1	stalkie_big_nohaplotig	exon	14726646	14726897	100	+	.	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 698 949 +
Chr1	stalkie_big_nohaplotig	exon	14727169	14727450	100	+	.	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 950 1231 +
Chr1	stalkie_big_nohaplotig	exon	14727503	14727745	100	+	.	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 1232 1474 +
Chr1	stalkie_big_nohaplotig	exon	14727974	14728225	100	+	.	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 1475 1726 +
Chr1	stalkie_big_nohaplotig	exon	14728289	14728561	100	+	.	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 1727 1999 +
Chr1	stalkie_big_nohaplotig	exon	14728620	14728844	100	+	.	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 2000 2224 +
Chr1	stalkie_big_nohaplotig	exon	14729668	14731661	99	+	.	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 2225 4218 +
Chr1	stalkie_big_nohaplotig	exon	14731746	14731866	100	+	.	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 4219 4339 +
Chr1	stalkie_big_nohaplotig	exon	14731937	14732328	100	+	.	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 4340 4731 +
Chr1	stalkie_big_nohaplotig	exon	14732394	14732549	100	+	.	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 4732 4887 +
Chr1	stalkie_big_nohaplotig	exon	14732605	14733409	100	+	.	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 4888 5692 +
Chr1	stalkie_big_nohaplotig	exon	14733477	14733653	100	+	.	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 5693 5869 +
Chr1	stalkie_big_nohaplotig	exon	14733733	14733878	99	+	.	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 5870 6015 +
Chr1	stalkie_big_nohaplotig	CDS	14724701	14724923	.	+	0	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 1 223 +
Chr1	stalkie_big_nohaplotig	CDS	14725776	14726249	.	+	2	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 224 697 +
Chr1	stalkie_big_nohaplotig	CDS	14726646	14726897	.	+	2	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 698 949 +
Chr1	stalkie_big_nohaplotig	CDS	14727169	14727450	.	+	2	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 950 1231 +
Chr1	stalkie_big_nohaplotig	CDS	14727503	14727745	.	+	2	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 1232 1474 +
Chr1	stalkie_big_nohaplotig	CDS	14727974	14728225	.	+	2	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 1475 1726 +
Chr1	stalkie_big_nohaplotig	CDS	14728289	14728561	.	+	2	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 1727 1999 +
Chr1	stalkie_big_nohaplotig	CDS	14728620	14728844	.	+	2	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 2000 2224 +
Chr1	stalkie_big_nohaplotig	CDS	14729668	14731661	.	+	2	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 2225 4218 +
Chr1	stalkie_big_nohaplotig	CDS	14731746	14731866	.	+	0	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 4219 4339 +
Chr1	stalkie_big_nohaplotig	CDS	14731937	14732328	.	+	2	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 4340 4731 +
Chr1	stalkie_big_nohaplotig	CDS	14732394	14732549	.	+	0	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 4732 4887 +
Chr1	stalkie_big_nohaplotig	CDS	14732605	14733409	.	+	0	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 4888 5692 +
Chr1	stalkie_big_nohaplotig	CDS	14733477	14733653	.	+	2	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 5693 5869 +
Chr1	stalkie_big_nohaplotig	CDS	14733733	14733878	.	+	2	Parent=FBgn0023479.1.mrna1;Target=FBgn0023479.1 5870 6015 +
Chr1	stalkie_big_nohaplotig	mRNA	14726874	14727192	.	-	.	ID=comp137336_c0_seq1.mrna1;geneID=comp137336_c0_seq1.path1;Name=comp137336_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=318;mismatches=1;indels=0;unknowns=0;Target=comp137336_c0_seq1 319 1 .;CDS_Target=comp137336_c0_seq1 243 172 .;locus=RLOC_00005991
Chr1	stalkie_big_nohaplotig	exon	14726874	14727192	99	-	.	Parent=comp137336_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14726950	14727021	.	-	0	Parent=comp137336_c0_seq1.mrna1
Chr1	gffcl	locus	14733931	14734519	.	+	.	ID=RLOC_00005992;geneIDs=comp152416_c0_seq1.path1;transcripts=comp152416_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14733931	14734519	.	+	.	ID=comp152416_c0_seq1.mrna1;geneID=comp152416_c0_seq1.path1;Name=comp152416_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=573;mismatches=8;indels=8;unknowns=0;Target=comp152416_c0_seq1 581 1 .;CDS_Target=comp152416_c0_seq1 581 417 .;locus=RLOC_00005992
Chr1	stalkie_big_nohaplotig	exon	14733931	14734519	97	+	.	Parent=comp152416_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14734355	14734519	.	+	0	Parent=comp152416_c0_seq1.mrna1
Chr1	gffcl	locus	14734761	14735783	.	-	.	ID=RLOC_00005993;geneIDs=comp148784_c0_seq1.path1;transcripts=comp148784_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14734761	14735783	.	-	.	ID=comp148784_c0_seq1.mrna1;geneID=comp148784_c0_seq1.path1;Name=comp148784_c0_seq1;Dir=antisensecoverage=97.5;identity=99.1;matches=845;mismatches=6;indels=2;unknowns=0;Target=comp148784_c0_seq1 400 591 .;locus=RLOC_00005993
Chr1	stalkie_big_nohaplotig	exon	14734761	14735371	99	-	.	Parent=comp148784_c0_seq1.mrna1;Target=comp148784_c0_seq1 23 633 -
Chr1	stalkie_big_nohaplotig	exon	14735544	14735783	97	-	.	Parent=comp148784_c0_seq1.mrna1;Target=comp148784_c0_seq1 634 875 -
Chr1	stalkie_big_nohaplotig	CDS	14735138	14735329	.	-	0	Parent=comp148784_c0_seq1.mrna1
Chr1	gffcl	locus	14737004	14738123	.	+	.	ID=RLOC_00005994;geneIDs=FBgn0052068.1.path1;transcripts=FBgn0052068.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14737004	14738123	.	+	.	ID=FBgn0052068.1.mrna1;geneID=FBgn0052068.1.path1;Name=FBgn0052068.1;Dir=sensecoverage=100.0;identity=99.7;matches=571;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005994
Chr1	stalkie_big_nohaplotig	exon	14737004	14737141	99	+	.	Parent=FBgn0052068.1.mrna1;Target=FBgn0052068.1 1 138 +
Chr1	stalkie_big_nohaplotig	exon	14737253	14737330	100	+	.	Parent=FBgn0052068.1.mrna1;Target=FBgn0052068.1 139 216 +
Chr1	stalkie_big_nohaplotig	exon	14737384	14737511	99	+	.	Parent=FBgn0052068.1.mrna1;Target=FBgn0052068.1 217 344 +
Chr1	stalkie_big_nohaplotig	exon	14737839	14737932	100	+	.	Parent=FBgn0052068.1.mrna1;Target=FBgn0052068.1 345 438 +
Chr1	stalkie_big_nohaplotig	exon	14737989	14738123	100	+	.	Parent=FBgn0052068.1.mrna1;Target=FBgn0052068.1 439 573 +
Chr1	stalkie_big_nohaplotig	CDS	14737004	14737141	.	+	0	Parent=FBgn0052068.1.mrna1;Target=FBgn0052068.1 1 138 +
Chr1	stalkie_big_nohaplotig	CDS	14737253	14737330	.	+	0	Parent=FBgn0052068.1.mrna1;Target=FBgn0052068.1 139 216 +
Chr1	stalkie_big_nohaplotig	CDS	14737384	14737511	.	+	0	Parent=FBgn0052068.1.mrna1;Target=FBgn0052068.1 217 344 +
Chr1	stalkie_big_nohaplotig	CDS	14737839	14737932	.	+	1	Parent=FBgn0052068.1.mrna1;Target=FBgn0052068.1 345 438 +
Chr1	stalkie_big_nohaplotig	CDS	14737989	14738123	.	+	0	Parent=FBgn0052068.1.mrna1;Target=FBgn0052068.1 439 573 +
Chr1	gffcl	locus	14740752	14776316	.	+	.	ID=RLOC_00005995;geneIDs=comp159820_c5_seq1.path1;transcripts=comp159820_c5_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14740752	14776316	.	+	.	ID=comp159820_c5_seq1.mrna1;geneID=comp159820_c5_seq1.path1;Name=comp159820_c5_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=2316;mismatches=2;indels=0;unknowns=0;locus=RLOC_00005995
Chr1	stalkie_big_nohaplotig	exon	14740752	14741441	99	+	.	Parent=comp159820_c5_seq1.mrna1;Target=comp159820_c5_seq1 1 690 +
Chr1	stalkie_big_nohaplotig	exon	14773824	14774570	100	+	.	Parent=comp159820_c5_seq1.mrna1;Target=comp159820_c5_seq1 691 1437 +
Chr1	stalkie_big_nohaplotig	exon	14774630	14774897	100	+	.	Parent=comp159820_c5_seq1.mrna1;Target=comp159820_c5_seq1 1438 1705 +
Chr1	stalkie_big_nohaplotig	exon	14775275	14775385	100	+	.	Parent=comp159820_c5_seq1.mrna1;Target=comp159820_c5_seq1 1706 1816 +
Chr1	stalkie_big_nohaplotig	exon	14775454	14775549	100	+	.	Parent=comp159820_c5_seq1.mrna1;Target=comp159820_c5_seq1 1817 1912 +
Chr1	stalkie_big_nohaplotig	exon	14775798	14775999	100	+	.	Parent=comp159820_c5_seq1.mrna1;Target=comp159820_c5_seq1 1913 2114 +
Chr1	stalkie_big_nohaplotig	exon	14776060	14776175	100	+	.	Parent=comp159820_c5_seq1.mrna1;Target=comp159820_c5_seq1 2115 2230 +
Chr1	stalkie_big_nohaplotig	exon	14776229	14776316	100	+	.	Parent=comp159820_c5_seq1.mrna1;Target=comp159820_c5_seq1 2231 2318 +
Chr1	stalkie_big_nohaplotig	CDS	14773861	14774570	.	+	0	Parent=comp159820_c5_seq1.mrna1;Target=comp159820_c5_seq1 728 1437 +
Chr1	stalkie_big_nohaplotig	CDS	14774630	14774897	.	+	1	Parent=comp159820_c5_seq1.mrna1;Target=comp159820_c5_seq1 1438 1705 +
Chr1	stalkie_big_nohaplotig	CDS	14775275	14775385	.	+	0	Parent=comp159820_c5_seq1.mrna1;Target=comp159820_c5_seq1 1706 1816 +
Chr1	stalkie_big_nohaplotig	CDS	14775454	14775549	.	+	0	Parent=comp159820_c5_seq1.mrna1;Target=comp159820_c5_seq1 1817 1912 +
Chr1	stalkie_big_nohaplotig	CDS	14775798	14775999	.	+	0	Parent=comp159820_c5_seq1.mrna1;Target=comp159820_c5_seq1 1913 2114 +
Chr1	stalkie_big_nohaplotig	CDS	14776060	14776175	.	+	2	Parent=comp159820_c5_seq1.mrna1;Target=comp159820_c5_seq1 2115 2230 +
Chr1	stalkie_big_nohaplotig	CDS	14776229	14776315	.	+	0	Parent=comp159820_c5_seq1.mrna1;Target=comp159820_c5_seq1 2231 2317 +
Chr1	gffcl	locus	14782081	14783045	.	-	.	ID=RLOC_00005996;geneIDs=comp160304_c3_seq1.path1;transcripts=comp160304_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14782081	14783045	.	-	.	ID=comp160304_c3_seq1.mrna1;geneID=comp160304_c3_seq1.path1;Name=comp160304_c3_seq1;Dir=indeterminatecoverage=99.9;identity=99.8;matches=963;mismatches=2;indels=0;unknowns=0;Target=comp160304_c3_seq1 966 2 .;CDS_Target=comp160304_c3_seq1 858 775 .;locus=RLOC_00005996
Chr1	stalkie_big_nohaplotig	exon	14782081	14783045	99	-	.	Parent=comp160304_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14782189	14782272	.	-	0	Parent=comp160304_c3_seq1.mrna1
Chr1	gffcl	locus	14784045	14784427	.	+	.	ID=RLOC_00005997;geneIDs=comp135664_c1_seq1.path1;transcripts=comp135664_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14784045	14784427	.	+	.	ID=comp135664_c1_seq1.mrna1;geneID=comp135664_c1_seq1.path1;Name=comp135664_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=383;mismatches=0;indels=2;unknowns=0;Target=comp135664_c1_seq1 385 1 .;CDS_Target=comp135664_c1_seq1 260 159 .;locus=RLOC_00005997
Chr1	stalkie_big_nohaplotig	exon	14784045	14784427	99	+	.	Parent=comp135664_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14784202	14784302	.	+	0	Parent=comp135664_c1_seq1.mrna1
Chr1	gffcl	locus	14786429	14786809	.	-	.	ID=RLOC_00005998;geneIDs=FBgn0053493.1.path1;transcripts=FBgn0053493.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14786429	14786809	.	-	.	ID=FBgn0053493.1.mrna1;geneID=FBgn0053493.1.path1;Name=FBgn0053493.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=381;mismatches=0;indels=0;unknowns=0;Target=FBgn0053493.1 381 1 .;locus=RLOC_00005998
Chr1	stalkie_big_nohaplotig	exon	14786429	14786809	100	-	.	Parent=FBgn0053493.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14786429	14786809	.	-	0	Parent=FBgn0053493.1.mrna1
Chr1	gffcl	locus	14787129	14787718	.	-	.	ID=RLOC_00005999;geneIDs=FBgn0047038.1.path1;transcripts=FBgn0047038.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14787129	14787718	.	-	.	ID=FBgn0047038.1.mrna1;geneID=FBgn0047038.1.path1;Name=FBgn0047038.1;Dir=sensecoverage=100.0;identity=100.0;matches=387;mismatches=0;indels=0;unknowns=0;locus=RLOC_00005999
Chr1	stalkie_big_nohaplotig	exon	14787129	14787317	100	-	.	Parent=FBgn0047038.1.mrna1;Target=FBgn0047038.1 199 387 +
Chr1	stalkie_big_nohaplotig	exon	14787383	14787544	100	-	.	Parent=FBgn0047038.1.mrna1;Target=FBgn0047038.1 37 198 +
Chr1	stalkie_big_nohaplotig	exon	14787683	14787718	100	-	.	Parent=FBgn0047038.1.mrna1;Target=FBgn0047038.1 1 36 +
Chr1	stalkie_big_nohaplotig	CDS	14787129	14787317	.	-	0	Parent=FBgn0047038.1.mrna1;Target=FBgn0047038.1 199 387 +
Chr1	stalkie_big_nohaplotig	CDS	14787383	14787544	.	-	0	Parent=FBgn0047038.1.mrna1;Target=FBgn0047038.1 37 198 +
Chr1	stalkie_big_nohaplotig	CDS	14787683	14787718	.	-	0	Parent=FBgn0047038.1.mrna1;Target=FBgn0047038.1 1 36 +
Chr1	gffcl	locus	14795189	14795748	.	-	.	ID=RLOC_00006001;geneIDs=FBgn0035148.1.path1;transcripts=FBgn0035148.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14795189	14795748	.	-	.	ID=FBgn0035148.1.mrna1;geneID=FBgn0035148.1.path1;Name=FBgn0035148.1;Dir=sensecoverage=100.0;identity=100.0;matches=399;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006001
Chr1	stalkie_big_nohaplotig	exon	14795189	14795374	100	-	.	Parent=FBgn0035148.1.mrna1;Target=FBgn0035148.1 214 399 +
Chr1	stalkie_big_nohaplotig	exon	14795437	14795565	100	-	.	Parent=FBgn0035148.1.mrna1;Target=FBgn0035148.1 85 213 +
Chr1	stalkie_big_nohaplotig	exon	14795665	14795748	100	-	.	Parent=FBgn0035148.1.mrna1;Target=FBgn0035148.1 1 84 +
Chr1	stalkie_big_nohaplotig	CDS	14795189	14795374	.	-	0	Parent=FBgn0035148.1.mrna1;Target=FBgn0035148.1 214 399 +
Chr1	stalkie_big_nohaplotig	CDS	14795437	14795565	.	-	0	Parent=FBgn0035148.1.mrna1;Target=FBgn0035148.1 85 213 +
Chr1	stalkie_big_nohaplotig	CDS	14795665	14795748	.	-	0	Parent=FBgn0035148.1.mrna1;Target=FBgn0035148.1 1 84 +
Chr1	gffcl	locus	14795966	14813562	.	-	.	ID=RLOC_00006002;geneIDs=FBgn0036663.1.path1,comp143898_c0_seq1.path1;transcripts=comp143898_c0_seq1.mrna1,FBgn0036663.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14795966	14802336	.	-	.	ID=comp143898_c0_seq1.mrna1;geneID=comp143898_c0_seq1.path1;Name=comp143898_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=4008;mismatches=12;indels=0;unknowns=0;Target=comp143898_c0_seq1 10 2 .;locus=RLOC_00006002
Chr1	stalkie_big_nohaplotig	exon	14795966	14796396	99	-	.	Parent=comp143898_c0_seq1.mrna1;Target=comp143898_c0_seq1 4020 3590 .
Chr1	stalkie_big_nohaplotig	exon	14798529	14800450	99	-	.	Parent=comp143898_c0_seq1.mrna1;Target=comp143898_c0_seq1 3589 1668 .
Chr1	stalkie_big_nohaplotig	exon	14800523	14800863	100	-	.	Parent=comp143898_c0_seq1.mrna1;Target=comp143898_c0_seq1 1667 1327 .
Chr1	stalkie_big_nohaplotig	exon	14800944	14801261	100	-	.	Parent=comp143898_c0_seq1.mrna1;Target=comp143898_c0_seq1 1326 1009 .
Chr1	stalkie_big_nohaplotig	exon	14801329	14802336	99	-	.	Parent=comp143898_c0_seq1.mrna1;Target=comp143898_c0_seq1 1008 1 .
Chr1	stalkie_big_nohaplotig	CDS	14802327	14802335	.	-	0	Parent=comp143898_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14802300	14813562	.	-	.	ID=FBgn0036663.1.mrna1;geneID=FBgn0036663.1.path1;Name=FBgn0036663.1;Dir=sensecoverage=100.0;identity=99.8;matches=4684;mismatches=8;indels=0;unknowns=0;locus=RLOC_00006002
Chr1	stalkie_big_nohaplotig	exon	14802300	14802497	99	-	.	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 4495 4692 +
Chr1	stalkie_big_nohaplotig	exon	14802557	14802878	100	-	.	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 4173 4494 +
Chr1	stalkie_big_nohaplotig	exon	14802937	14803268	100	-	.	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 3841 4172 +
Chr1	stalkie_big_nohaplotig	exon	14803692	14803825	100	-	.	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 3707 3840 +
Chr1	stalkie_big_nohaplotig	exon	14803895	14804004	99	-	.	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 3597 3706 +
Chr1	stalkie_big_nohaplotig	exon	14804926	14805071	100	-	.	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 3451 3596 +
Chr1	stalkie_big_nohaplotig	exon	14805136	14805494	100	-	.	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 3092 3450 +
Chr1	stalkie_big_nohaplotig	exon	14805572	14805702	100	-	.	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 2961 3091 +
Chr1	stalkie_big_nohaplotig	exon	14805773	14806933	99	-	.	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 1800 2960 +
Chr1	stalkie_big_nohaplotig	exon	14807007	14807179	98	-	.	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 1627 1799 +
Chr1	stalkie_big_nohaplotig	exon	14807454	14808540	99	-	.	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 540 1626 +
Chr1	stalkie_big_nohaplotig	exon	14810694	14810821	100	-	.	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 412 539 +
Chr1	stalkie_big_nohaplotig	exon	14813152	14813562	100	-	.	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 1 411 +
Chr1	stalkie_big_nohaplotig	CDS	14802300	14802497	.	-	0	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 4495 4692 +
Chr1	stalkie_big_nohaplotig	CDS	14802557	14802878	.	-	1	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 4173 4494 +
Chr1	stalkie_big_nohaplotig	CDS	14802937	14803268	.	-	0	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 3841 4172 +
Chr1	stalkie_big_nohaplotig	CDS	14803692	14803825	.	-	2	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 3707 3840 +
Chr1	stalkie_big_nohaplotig	CDS	14803895	14804004	.	-	1	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 3597 3706 +
Chr1	stalkie_big_nohaplotig	CDS	14804926	14805071	.	-	0	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 3451 3596 +
Chr1	stalkie_big_nohaplotig	CDS	14805136	14805494	.	-	2	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 3092 3450 +
Chr1	stalkie_big_nohaplotig	CDS	14805572	14805702	.	-	1	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 2961 3091 +
Chr1	stalkie_big_nohaplotig	CDS	14805773	14806933	.	-	1	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 1800 2960 +
Chr1	stalkie_big_nohaplotig	CDS	14807007	14807179	.	-	0	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 1627 1799 +
Chr1	stalkie_big_nohaplotig	CDS	14807454	14808540	.	-	1	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 540 1626 +
Chr1	stalkie_big_nohaplotig	CDS	14810694	14810821	.	-	0	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 412 539 +
Chr1	stalkie_big_nohaplotig	CDS	14813152	14813562	.	-	0	Parent=FBgn0036663.1.mrna1;Target=FBgn0036663.1 1 411 +
Chr1	gffcl	locus	14796373	14797116	.	+	.	ID=RLOC_00006003;geneIDs=comp62198_c0_seq1.path1;transcripts=comp62198_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14796373	14797116	.	+	.	ID=comp62198_c0_seq1.mrna1;geneID=comp62198_c0_seq1.path1;Name=comp62198_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=685;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006003
Chr1	stalkie_big_nohaplotig	exon	14796373	14796396	100	+	.	Parent=comp62198_c0_seq1.mrna1;Target=comp62198_c0_seq1 662 685 -
Chr1	stalkie_big_nohaplotig	exon	14796456	14797116	100	+	.	Parent=comp62198_c0_seq1.mrna1;Target=comp62198_c0_seq1 1 661 -
Chr1	stalkie_big_nohaplotig	CDS	14796375	14796396	.	+	0	Parent=comp62198_c0_seq1.mrna1;Target=comp62198_c0_seq1 662 683 .
Chr1	stalkie_big_nohaplotig	CDS	14796456	14796748	.	+	2	Parent=comp62198_c0_seq1.mrna1;Target=comp62198_c0_seq1 369 661 .
Chr1	gffcl	locus	14834460	14861054	.	+	.	ID=RLOC_00006004;geneIDs=FBgn0021768.1.path1;transcripts=FBgn0021768.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14834460	14861054	.	+	.	ID=FBgn0021768.1.mrna1;geneID=FBgn0021768.1.path1;Name=FBgn0021768.1;Dir=sensecoverage=100.0;identity=99.8;matches=1030;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006004
Chr1	stalkie_big_nohaplotig	exon	14834460	14834567	100	+	.	Parent=FBgn0021768.1.mrna1;Target=FBgn0021768.1 1 108 +
Chr1	stalkie_big_nohaplotig	exon	14834640	14834923	99	+	.	Parent=FBgn0021768.1.mrna1;Target=FBgn0021768.1 109 392 +
Chr1	stalkie_big_nohaplotig	exon	14834984	14835176	100	+	.	Parent=FBgn0021768.1.mrna1;Target=FBgn0021768.1 393 585 +
Chr1	stalkie_big_nohaplotig	exon	14860451	14860645	100	+	.	Parent=FBgn0021768.1.mrna1;Target=FBgn0021768.1 586 780 +
Chr1	stalkie_big_nohaplotig	exon	14860730	14860932	100	+	.	Parent=FBgn0021768.1.mrna1;Target=FBgn0021768.1 781 983 +
Chr1	stalkie_big_nohaplotig	exon	14861006	14861054	100	+	.	Parent=FBgn0021768.1.mrna1;Target=FBgn0021768.1 984 1032 +
Chr1	stalkie_big_nohaplotig	CDS	14834460	14834567	.	+	0	Parent=FBgn0021768.1.mrna1;Target=FBgn0021768.1 1 108 +
Chr1	stalkie_big_nohaplotig	CDS	14834640	14834923	.	+	0	Parent=FBgn0021768.1.mrna1;Target=FBgn0021768.1 109 392 +
Chr1	stalkie_big_nohaplotig	CDS	14834984	14835176	.	+	1	Parent=FBgn0021768.1.mrna1;Target=FBgn0021768.1 393 585 +
Chr1	stalkie_big_nohaplotig	CDS	14860451	14860645	.	+	0	Parent=FBgn0021768.1.mrna1;Target=FBgn0021768.1 586 780 +
Chr1	stalkie_big_nohaplotig	CDS	14860730	14860932	.	+	0	Parent=FBgn0021768.1.mrna1;Target=FBgn0021768.1 781 983 +
Chr1	stalkie_big_nohaplotig	CDS	14861006	14861054	.	+	1	Parent=FBgn0021768.1.mrna1;Target=FBgn0021768.1 984 1032 +
Chr1	gffcl	locus	14840001	14843236	.	-	.	ID=RLOC_00006005;geneIDs=FBgn0036665.1.path1;transcripts=FBgn0036665.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14840001	14843236	.	-	.	ID=FBgn0036665.1.mrna1;geneID=FBgn0036665.1.path1;Name=FBgn0036665.1;Dir=sensecoverage=100.0;identity=99.9;matches=1046;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006005
Chr1	stalkie_big_nohaplotig	exon	14840001	14840026	100	-	.	Parent=FBgn0036665.1.mrna1;Target=FBgn0036665.1 1022 1047 +
Chr1	stalkie_big_nohaplotig	exon	14840098	14840617	99	-	.	Parent=FBgn0036665.1.mrna1;Target=FBgn0036665.1 502 1021 +
Chr1	stalkie_big_nohaplotig	exon	14840690	14841163	100	-	.	Parent=FBgn0036665.1.mrna1;Target=FBgn0036665.1 28 501 +
Chr1	stalkie_big_nohaplotig	exon	14843210	14843236	100	-	.	Parent=FBgn0036665.1.mrna1;Target=FBgn0036665.1 1 27 +
Chr1	stalkie_big_nohaplotig	CDS	14840001	14840026	.	-	2	Parent=FBgn0036665.1.mrna1;Target=FBgn0036665.1 1022 1047 +
Chr1	stalkie_big_nohaplotig	CDS	14840098	14840617	.	-	0	Parent=FBgn0036665.1.mrna1;Target=FBgn0036665.1 502 1021 +
Chr1	stalkie_big_nohaplotig	CDS	14840690	14841163	.	-	0	Parent=FBgn0036665.1.mrna1;Target=FBgn0036665.1 28 501 +
Chr1	stalkie_big_nohaplotig	CDS	14843210	14843236	.	-	0	Parent=FBgn0036665.1.mrna1;Target=FBgn0036665.1 1 27 +
Chr1	gffcl	locus	14843403	14844022	.	+	.	ID=RLOC_00006006;geneIDs=comp134797_c1_seq1.path1;transcripts=comp134797_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14843403	14844022	.	+	.	ID=comp134797_c1_seq1.mrna1;geneID=comp134797_c1_seq1.path1;Name=comp134797_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=619;mismatches=1;indels=0;unknowns=0;Target=comp134797_c1_seq1 620 1 .;CDS_Target=comp134797_c1_seq1 163 8 .;locus=RLOC_00006006
Chr1	stalkie_big_nohaplotig	exon	14843403	14844022	99	+	.	Parent=comp134797_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14843410	14843565	.	+	0	Parent=comp134797_c1_seq1.mrna1
Chr1	gffcl	locus	14921739	14924257	.	+	.	ID=RLOC_00006007;geneIDs=FBgn0036286.1.path1;transcripts=FBgn0036286.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14921739	14924257	.	+	.	ID=FBgn0036286.1.mrna1;geneID=FBgn0036286.1.path1;Name=FBgn0036286.1;Dir=sensecoverage=100.0;identity=99.9;matches=1373;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006007
Chr1	stalkie_big_nohaplotig	exon	14921739	14921849	100	+	.	Parent=FBgn0036286.1.mrna1;Target=FBgn0036286.1 1 111 +
Chr1	stalkie_big_nohaplotig	exon	14921920	14922115	100	+	.	Parent=FBgn0036286.1.mrna1;Target=FBgn0036286.1 112 307 +
Chr1	stalkie_big_nohaplotig	exon	14922249	14922327	100	+	.	Parent=FBgn0036286.1.mrna1;Target=FBgn0036286.1 308 386 +
Chr1	stalkie_big_nohaplotig	exon	14922384	14922506	99	+	.	Parent=FBgn0036286.1.mrna1;Target=FBgn0036286.1 387 509 +
Chr1	stalkie_big_nohaplotig	exon	14923393	14924257	100	+	.	Parent=FBgn0036286.1.mrna1;Target=FBgn0036286.1 510 1374 +
Chr1	stalkie_big_nohaplotig	CDS	14921739	14921849	.	+	0	Parent=FBgn0036286.1.mrna1;Target=FBgn0036286.1 1 111 +
Chr1	stalkie_big_nohaplotig	CDS	14921920	14922115	.	+	0	Parent=FBgn0036286.1.mrna1;Target=FBgn0036286.1 112 307 +
Chr1	stalkie_big_nohaplotig	CDS	14922249	14922327	.	+	2	Parent=FBgn0036286.1.mrna1;Target=FBgn0036286.1 308 386 +
Chr1	stalkie_big_nohaplotig	CDS	14922384	14922506	.	+	1	Parent=FBgn0036286.1.mrna1;Target=FBgn0036286.1 387 509 +
Chr1	stalkie_big_nohaplotig	CDS	14923393	14924257	.	+	1	Parent=FBgn0036286.1.mrna1;Target=FBgn0036286.1 510 1374 +
Chr1	gffcl	locus	14928020	14968948	.	-	.	ID=RLOC_00006008;geneIDs=FBgn0036287.1.path1,comp162168_c0_seq1.path1;transcripts=comp162168_c0_seq1.mrna1,FBgn0036287.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14928020	14968948	.	-	.	ID=comp162168_c0_seq1.mrna1;geneID=comp162168_c0_seq1.path1;Name=comp162168_c0_seq1;Dir=sensecoverage=100.0;identity=99.0;matches=4651;mismatches=26;indels=20;unknowns=0;locus=RLOC_00006008
Chr1	stalkie_big_nohaplotig	exon	14928020	14929143	98	-	.	Parent=comp162168_c0_seq1.mrna1;Target=comp162168_c0_seq1 3558 4697 +
Chr1	stalkie_big_nohaplotig	exon	14929212	14929414	100	-	.	Parent=comp162168_c0_seq1.mrna1;Target=comp162168_c0_seq1 3355 3557 +
Chr1	stalkie_big_nohaplotig	exon	14929472	14929847	100	-	.	Parent=comp162168_c0_seq1.mrna1;Target=comp162168_c0_seq1 2979 3354 +
Chr1	stalkie_big_nohaplotig	exon	14929921	14930841	99	-	.	Parent=comp162168_c0_seq1.mrna1;Target=comp162168_c0_seq1 2058 2978 +
Chr1	stalkie_big_nohaplotig	exon	14931048	14931379	99	-	.	Parent=comp162168_c0_seq1.mrna1;Target=comp162168_c0_seq1 1726 2057 +
Chr1	stalkie_big_nohaplotig	exon	14944619	14944787	100	-	.	Parent=comp162168_c0_seq1.mrna1;Target=comp162168_c0_seq1 1557 1725 +
Chr1	stalkie_big_nohaplotig	exon	14967397	14968948	98	-	.	Parent=comp162168_c0_seq1.mrna1;Target=comp162168_c0_seq1 1 1556 +
Chr1	stalkie_big_nohaplotig	CDS	14928678	14929143	.	-	1	Parent=comp162168_c0_seq1.mrna1;Target=comp162168_c0_seq1 3558 4023 +
Chr1	stalkie_big_nohaplotig	CDS	14929212	14929414	.	-	0	Parent=comp162168_c0_seq1.mrna1;Target=comp162168_c0_seq1 3355 3557 +
Chr1	stalkie_big_nohaplotig	CDS	14929472	14929847	.	-	1	Parent=comp162168_c0_seq1.mrna1;Target=comp162168_c0_seq1 2979 3354 +
Chr1	stalkie_big_nohaplotig	CDS	14929921	14930841	.	-	1	Parent=comp162168_c0_seq1.mrna1;Target=comp162168_c0_seq1 2058 2978 +
Chr1	stalkie_big_nohaplotig	CDS	14931048	14931379	.	-	0	Parent=comp162168_c0_seq1.mrna1;Target=comp162168_c0_seq1 1726 2057 +
Chr1	stalkie_big_nohaplotig	CDS	14944619	14944678	.	-	0	Parent=comp162168_c0_seq1.mrna1;Target=comp162168_c0_seq1 1666 1725 +
Chr1	stalkie_big_nohaplotig	mRNA	14928681	14930924	.	-	.	ID=FBgn0036287.1.mrna1;geneID=FBgn0036287.1.path1;Name=FBgn0036287.1;Dir=sensecoverage=100.0;identity=99.9;matches=2044;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006008
Chr1	stalkie_big_nohaplotig	exon	14928681	14929143	100	-	.	Parent=FBgn0036287.1.mrna1;Target=FBgn0036287.1 1584 2046 +
Chr1	stalkie_big_nohaplotig	exon	14929212	14929414	100	-	.	Parent=FBgn0036287.1.mrna1;Target=FBgn0036287.1 1381 1583 +
Chr1	stalkie_big_nohaplotig	exon	14929472	14929847	100	-	.	Parent=FBgn0036287.1.mrna1;Target=FBgn0036287.1 1005 1380 +
Chr1	stalkie_big_nohaplotig	exon	14929921	14930924	99	-	.	Parent=FBgn0036287.1.mrna1;Target=FBgn0036287.1 1 1004 +
Chr1	stalkie_big_nohaplotig	CDS	14928681	14929143	.	-	1	Parent=FBgn0036287.1.mrna1;Target=FBgn0036287.1 1584 2046 +
Chr1	stalkie_big_nohaplotig	CDS	14929212	14929414	.	-	0	Parent=FBgn0036287.1.mrna1;Target=FBgn0036287.1 1381 1583 +
Chr1	stalkie_big_nohaplotig	CDS	14929472	14929847	.	-	1	Parent=FBgn0036287.1.mrna1;Target=FBgn0036287.1 1005 1380 +
Chr1	stalkie_big_nohaplotig	CDS	14929921	14930924	.	-	0	Parent=FBgn0036287.1.mrna1;Target=FBgn0036287.1 1 1004 +
Chr1	gffcl	locus	14970180	14975672	.	.	.	ID=RLOC_00006009;geneIDs=FBgn0036288.1.path1,comp148329_c0_seq1.path1,comp152550_c0_seq1.path1,comp153546_c0_seq1.path1;transcripts=FBgn0036288.1.mrna1,comp148329_c0_seq1.mrna1,comp153546_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14970180	14975672	.	-	.	ID=FBgn0036288.1.mrna1;geneID=FBgn0036288.1.path1;Name=FBgn0036288.1;Dir=sensecoverage=100.0;identity=99.9;matches=1564;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006009
Chr1	stalkie_big_nohaplotig	exon	14970180	14970851	99	-	.	Parent=FBgn0036288.1.mrna1;Target=FBgn0036288.1 895 1566 +
Chr1	stalkie_big_nohaplotig	exon	14970915	14971045	100	-	.	Parent=FBgn0036288.1.mrna1;Target=FBgn0036288.1 764 894 +
Chr1	stalkie_big_nohaplotig	exon	14971105	14971336	100	-	.	Parent=FBgn0036288.1.mrna1;Target=FBgn0036288.1 532 763 +
Chr1	stalkie_big_nohaplotig	exon	14971417	14971552	100	-	.	Parent=FBgn0036288.1.mrna1;Target=FBgn0036288.1 396 531 +
Chr1	stalkie_big_nohaplotig	exon	14972120	14972223	100	-	.	Parent=FBgn0036288.1.mrna1;Target=FBgn0036288.1 292 395 +
Chr1	stalkie_big_nohaplotig	exon	14973721	14973853	100	-	.	Parent=FBgn0036288.1.mrna1;Target=FBgn0036288.1 159 291 +
Chr1	stalkie_big_nohaplotig	exon	14974001	14974068	100	-	.	Parent=FBgn0036288.1.mrna1;Target=FBgn0036288.1 91 158 +
Chr1	stalkie_big_nohaplotig	exon	14975583	14975672	100	-	.	Parent=FBgn0036288.1.mrna1;Target=FBgn0036288.1 1 90 +
Chr1	stalkie_big_nohaplotig	CDS	14970180	14970851	.	-	0	Parent=FBgn0036288.1.mrna1;Target=FBgn0036288.1 895 1566 +
Chr1	stalkie_big_nohaplotig	CDS	14970915	14971045	.	-	2	Parent=FBgn0036288.1.mrna1;Target=FBgn0036288.1 764 894 +
Chr1	stalkie_big_nohaplotig	CDS	14971105	14971336	.	-	0	Parent=FBgn0036288.1.mrna1;Target=FBgn0036288.1 532 763 +
Chr1	stalkie_big_nohaplotig	CDS	14971417	14971552	.	-	1	Parent=FBgn0036288.1.mrna1;Target=FBgn0036288.1 396 531 +
Chr1	stalkie_big_nohaplotig	CDS	14972120	14972223	.	-	0	Parent=FBgn0036288.1.mrna1;Target=FBgn0036288.1 292 395 +
Chr1	stalkie_big_nohaplotig	CDS	14973721	14973853	.	-	1	Parent=FBgn0036288.1.mrna1;Target=FBgn0036288.1 159 291 +
Chr1	stalkie_big_nohaplotig	CDS	14974001	14974068	.	-	0	Parent=FBgn0036288.1.mrna1;Target=FBgn0036288.1 91 158 +
Chr1	stalkie_big_nohaplotig	CDS	14975583	14975672	.	-	0	Parent=FBgn0036288.1.mrna1;Target=FBgn0036288.1 1 90 +
Chr1	stalkie_big_nohaplotig	mRNA	14972134	14972820	.	+	.	ID=comp148329_c0_seq1.mrna1;geneID=comp148329_c0_seq1.path1;Name=comp148329_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=673;mismatches=14;indels=0;unknowns=0;Target=comp148329_c0_seq1 687 1 .;CDS_Target=comp148329_c0_seq1 49 2 .;locus=RLOC_00006009
Chr1	stalkie_big_nohaplotig	exon	14972134	14972820	97	+	.	Parent=comp148329_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14972135	14972182	.	+	0	Parent=comp148329_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14973136	14973741	.	-	.	ID=comp153546_c0_seq1.mrna1;geneID=comp153546_c0_seq1.path1;Name=comp153546_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.1;matches=596;mismatches=10;indels=21;unknowns=0;Target=comp153546_c0_seq1 627 1 .;CDS_Target=comp153546_c0_seq1 212 123 .;locus=RLOC_00006009
Chr1	stalkie_big_nohaplotig	exon	14973136	14973741	95	-	.	Parent=comp153546_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14973549	14973619	.	-	0	Parent=comp153546_c0_seq1.mrna1
Chr1	gffcl	locus	14989619	14995256	.	-	.	ID=RLOC_00006010;geneIDs=CPIJ005630.1.path1,comp149411_c0_seq1.path1;transcripts=comp149411_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14989619	14995256	.	-	.	ID=comp149411_c0_seq1.mrna1;geneID=comp149411_c0_seq1.path1;Name=comp149411_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=4167;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006010
Chr1	stalkie_big_nohaplotig	exon	14989619	14990161	100	-	.	Parent=comp149411_c0_seq1.mrna1;Target=comp149411_c0_seq1 3625 4167 +
Chr1	stalkie_big_nohaplotig	exon	14990218	14990390	100	-	.	Parent=comp149411_c0_seq1.mrna1;Target=comp149411_c0_seq1 3452 3624 +
Chr1	stalkie_big_nohaplotig	exon	14990500	14991334	100	-	.	Parent=comp149411_c0_seq1.mrna1;Target=comp149411_c0_seq1 2617 3451 +
Chr1	stalkie_big_nohaplotig	exon	14991442	14991753	100	-	.	Parent=comp149411_c0_seq1.mrna1;Target=comp149411_c0_seq1 2305 2616 +
Chr1	stalkie_big_nohaplotig	exon	14991823	14991984	100	-	.	Parent=comp149411_c0_seq1.mrna1;Target=comp149411_c0_seq1 2143 2304 +
Chr1	stalkie_big_nohaplotig	exon	14992052	14992240	100	-	.	Parent=comp149411_c0_seq1.mrna1;Target=comp149411_c0_seq1 1954 2142 +
Chr1	stalkie_big_nohaplotig	exon	14992300	14993079	100	-	.	Parent=comp149411_c0_seq1.mrna1;Target=comp149411_c0_seq1 1174 1953 +
Chr1	stalkie_big_nohaplotig	exon	14993149	14993530	100	-	.	Parent=comp149411_c0_seq1.mrna1;Target=comp149411_c0_seq1 792 1173 +
Chr1	stalkie_big_nohaplotig	exon	14993588	14993899	100	-	.	Parent=comp149411_c0_seq1.mrna1;Target=comp149411_c0_seq1 480 791 +
Chr1	stalkie_big_nohaplotig	exon	14993965	14994263	100	-	.	Parent=comp149411_c0_seq1.mrna1;Target=comp149411_c0_seq1 181 479 +
Chr1	stalkie_big_nohaplotig	exon	14995077	14995256	100	-	.	Parent=comp149411_c0_seq1.mrna1;Target=comp149411_c0_seq1 1 180 +
Chr1	stalkie_big_nohaplotig	CDS	14989908	14990161	.	-	2	Parent=comp149411_c0_seq1.mrna1;Target=comp149411_c0_seq1 3625 3878 +
Chr1	stalkie_big_nohaplotig	CDS	14990218	14990390	.	-	1	Parent=comp149411_c0_seq1.mrna1;Target=comp149411_c0_seq1 3452 3624 +
Chr1	stalkie_big_nohaplotig	CDS	14990500	14991334	.	-	2	Parent=comp149411_c0_seq1.mrna1;Target=comp149411_c0_seq1 2617 3451 +
Chr1	stalkie_big_nohaplotig	CDS	14991442	14991753	.	-	2	Parent=comp149411_c0_seq1.mrna1;Target=comp149411_c0_seq1 2305 2616 +
Chr1	stalkie_big_nohaplotig	CDS	14991823	14991984	.	-	2	Parent=comp149411_c0_seq1.mrna1;Target=comp149411_c0_seq1 2143 2304 +
Chr1	stalkie_big_nohaplotig	CDS	14992052	14992240	.	-	2	Parent=comp149411_c0_seq1.mrna1;Target=comp149411_c0_seq1 1954 2142 +
Chr1	stalkie_big_nohaplotig	CDS	14992300	14993079	.	-	2	Parent=comp149411_c0_seq1.mrna1;Target=comp149411_c0_seq1 1174 1953 +
Chr1	stalkie_big_nohaplotig	CDS	14993149	14993530	.	-	0	Parent=comp149411_c0_seq1.mrna1;Target=comp149411_c0_seq1 792 1173 +
Chr1	stalkie_big_nohaplotig	CDS	14993588	14993899	.	-	0	Parent=comp149411_c0_seq1.mrna1;Target=comp149411_c0_seq1 480 791 +
Chr1	stalkie_big_nohaplotig	CDS	14993965	14994263	.	-	2	Parent=comp149411_c0_seq1.mrna1;Target=comp149411_c0_seq1 181 479 +
Chr1	stalkie_big_nohaplotig	CDS	14995077	14995158	.	-	0	Parent=comp149411_c0_seq1.mrna1;Target=comp149411_c0_seq1 99 180 +
Chr1	gffcl	locus	14996980	14999394	.	+	.	ID=RLOC_00006011;geneIDs=FBgn0035575.1.path1,comp132489_c0_seq1.path1;transcripts=FBgn0035575.1.mrna1,comp132489_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14996980	14999394	.	+	.	ID=FBgn0035575.1.mrna1;geneID=FBgn0035575.1.path1;Name=FBgn0035575.1;Dir=sensecoverage=100.0;identity=100.0;matches=1869;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006011
Chr1	stalkie_big_nohaplotig	exon	14996980	14997533	100	+	.	Parent=FBgn0035575.1.mrna1;Target=FBgn0035575.1 1 554 +
Chr1	stalkie_big_nohaplotig	exon	14997593	14997736	100	+	.	Parent=FBgn0035575.1.mrna1;Target=FBgn0035575.1 555 698 +
Chr1	stalkie_big_nohaplotig	exon	14997804	14998126	100	+	.	Parent=FBgn0035575.1.mrna1;Target=FBgn0035575.1 699 1021 +
Chr1	stalkie_big_nohaplotig	exon	14998176	14998324	100	+	.	Parent=FBgn0035575.1.mrna1;Target=FBgn0035575.1 1022 1170 +
Chr1	stalkie_big_nohaplotig	exon	14998622	14998881	100	+	.	Parent=FBgn0035575.1.mrna1;Target=FBgn0035575.1 1171 1430 +
Chr1	stalkie_big_nohaplotig	exon	14998956	14999394	100	+	.	Parent=FBgn0035575.1.mrna1;Target=FBgn0035575.1 1431 1869 +
Chr1	stalkie_big_nohaplotig	CDS	14996980	14997533	.	+	0	Parent=FBgn0035575.1.mrna1;Target=FBgn0035575.1 1 554 +
Chr1	stalkie_big_nohaplotig	CDS	14997593	14997736	.	+	1	Parent=FBgn0035575.1.mrna1;Target=FBgn0035575.1 555 698 +
Chr1	stalkie_big_nohaplotig	CDS	14997804	14998126	.	+	1	Parent=FBgn0035575.1.mrna1;Target=FBgn0035575.1 699 1021 +
Chr1	stalkie_big_nohaplotig	CDS	14998176	14998324	.	+	2	Parent=FBgn0035575.1.mrna1;Target=FBgn0035575.1 1022 1170 +
Chr1	stalkie_big_nohaplotig	CDS	14998622	14998881	.	+	0	Parent=FBgn0035575.1.mrna1;Target=FBgn0035575.1 1171 1430 +
Chr1	stalkie_big_nohaplotig	CDS	14998956	14999394	.	+	1	Parent=FBgn0035575.1.mrna1;Target=FBgn0035575.1 1431 1869 +
Chr1	stalkie_big_nohaplotig	mRNA	14998301	14998643	.	+	.	ID=comp132489_c0_seq1.mrna1;geneID=comp132489_c0_seq1.path1;Name=comp132489_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=343;mismatches=0;indels=0;unknowns=0;Target=comp132489_c0_seq1 343 1 .;CDS_Target=comp132489_c0_seq1 84 1 .;locus=RLOC_00006011
Chr1	stalkie_big_nohaplotig	exon	14998301	14998643	100	+	.	Parent=comp132489_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	14998301	14998384	.	+	0	Parent=comp132489_c0_seq1.mrna1
Chr1	gffcl	locus	14999832	15010932	.	-	.	ID=RLOC_00006012;geneIDs=FBgn0036289.1.path1;transcripts=FBgn0036289.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	14999832	15010932	.	-	.	ID=FBgn0036289.1.mrna1;geneID=FBgn0036289.1.path1;Name=FBgn0036289.1;Dir=sensecoverage=100.0;identity=99.9;matches=1016;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006012
Chr1	stalkie_big_nohaplotig	exon	14999832	15000083	99	-	.	Parent=FBgn0036289.1.mrna1;Target=FBgn0036289.1 766 1017 +
Chr1	stalkie_big_nohaplotig	exon	15000142	15000258	100	-	.	Parent=FBgn0036289.1.mrna1;Target=FBgn0036289.1 649 765 +
Chr1	stalkie_big_nohaplotig	exon	15000324	15000800	100	-	.	Parent=FBgn0036289.1.mrna1;Target=FBgn0036289.1 172 648 +
Chr1	stalkie_big_nohaplotig	exon	15000868	15001016	100	-	.	Parent=FBgn0036289.1.mrna1;Target=FBgn0036289.1 23 171 +
Chr1	stalkie_big_nohaplotig	exon	15010911	15010932	100	-	.	Parent=FBgn0036289.1.mrna1;Target=FBgn0036289.1 1 22 +
Chr1	stalkie_big_nohaplotig	CDS	14999832	15000083	.	-	0	Parent=FBgn0036289.1.mrna1;Target=FBgn0036289.1 766 1017 +
Chr1	stalkie_big_nohaplotig	CDS	15000142	15000258	.	-	0	Parent=FBgn0036289.1.mrna1;Target=FBgn0036289.1 649 765 +
Chr1	stalkie_big_nohaplotig	CDS	15000324	15000800	.	-	0	Parent=FBgn0036289.1.mrna1;Target=FBgn0036289.1 172 648 +
Chr1	stalkie_big_nohaplotig	CDS	15000868	15001016	.	-	2	Parent=FBgn0036289.1.mrna1;Target=FBgn0036289.1 23 171 +
Chr1	stalkie_big_nohaplotig	CDS	15010911	15010932	.	-	0	Parent=FBgn0036289.1.mrna1;Target=FBgn0036289.1 1 22 +
Chr1	gffcl	locus	15014947	15016976	.	-	.	ID=RLOC_00006013;geneIDs=FBgn0036290.1.path1;transcripts=FBgn0036290.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15014947	15016976	.	-	.	ID=FBgn0036290.1.mrna1;geneID=FBgn0036290.1.path1;Name=FBgn0036290.1;Dir=sensecoverage=100.0;identity=100.0;matches=999;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006013
Chr1	stalkie_big_nohaplotig	exon	15014947	15015135	100	-	.	Parent=FBgn0036290.1.mrna1;Target=FBgn0036290.1 811 999 +
Chr1	stalkie_big_nohaplotig	exon	15015199	15015396	100	-	.	Parent=FBgn0036290.1.mrna1;Target=FBgn0036290.1 613 810 +
Chr1	stalkie_big_nohaplotig	exon	15015463	15015607	100	-	.	Parent=FBgn0036290.1.mrna1;Target=FBgn0036290.1 468 612 +
Chr1	stalkie_big_nohaplotig	exon	15015682	15015851	100	-	.	Parent=FBgn0036290.1.mrna1;Target=FBgn0036290.1 298 467 +
Chr1	stalkie_big_nohaplotig	exon	15015911	15016078	100	-	.	Parent=FBgn0036290.1.mrna1;Target=FBgn0036290.1 130 297 +
Chr1	stalkie_big_nohaplotig	exon	15016848	15016976	100	-	.	Parent=FBgn0036290.1.mrna1;Target=FBgn0036290.1 1 129 +
Chr1	stalkie_big_nohaplotig	CDS	15014947	15015135	.	-	0	Parent=FBgn0036290.1.mrna1;Target=FBgn0036290.1 811 999 +
Chr1	stalkie_big_nohaplotig	CDS	15015199	15015396	.	-	0	Parent=FBgn0036290.1.mrna1;Target=FBgn0036290.1 613 810 +
Chr1	stalkie_big_nohaplotig	CDS	15015463	15015607	.	-	1	Parent=FBgn0036290.1.mrna1;Target=FBgn0036290.1 468 612 +
Chr1	stalkie_big_nohaplotig	CDS	15015682	15015851	.	-	0	Parent=FBgn0036290.1.mrna1;Target=FBgn0036290.1 298 467 +
Chr1	stalkie_big_nohaplotig	CDS	15015911	15016078	.	-	0	Parent=FBgn0036290.1.mrna1;Target=FBgn0036290.1 130 297 +
Chr1	stalkie_big_nohaplotig	CDS	15016848	15016976	.	-	0	Parent=FBgn0036290.1.mrna1;Target=FBgn0036290.1 1 129 +
Chr1	gffcl	locus	15018518	15020563	.	-	.	ID=RLOC_00006014;geneIDs=FBgn0027552.1.path1;transcripts=FBgn0027552.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15018518	15020563	.	-	.	ID=FBgn0027552.1.mrna1;geneID=FBgn0027552.1.path1;Name=FBgn0027552.1;Dir=sensecoverage=100.0;identity=100.0;matches=1029;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006014
Chr1	stalkie_big_nohaplotig	exon	15018518	15018706	100	-	.	Parent=FBgn0027552.1.mrna1;Target=FBgn0027552.1 841 1029 +
Chr1	stalkie_big_nohaplotig	exon	15018764	15018961	100	-	.	Parent=FBgn0027552.1.mrna1;Target=FBgn0027552.1 643 840 +
Chr1	stalkie_big_nohaplotig	exon	15019031	15019175	100	-	.	Parent=FBgn0027552.1.mrna1;Target=FBgn0027552.1 498 642 +
Chr1	stalkie_big_nohaplotig	exon	15019229	15019401	100	-	.	Parent=FBgn0027552.1.mrna1;Target=FBgn0027552.1 325 497 +
Chr1	stalkie_big_nohaplotig	exon	15019467	15019634	100	-	.	Parent=FBgn0027552.1.mrna1;Target=FBgn0027552.1 157 324 +
Chr1	stalkie_big_nohaplotig	exon	15020346	15020444	100	-	.	Parent=FBgn0027552.1.mrna1;Target=FBgn0027552.1 58 156 +
Chr1	stalkie_big_nohaplotig	exon	15020507	15020563	100	-	.	Parent=FBgn0027552.1.mrna1;Target=FBgn0027552.1 1 57 +
Chr1	stalkie_big_nohaplotig	CDS	15018518	15018706	.	-	0	Parent=FBgn0027552.1.mrna1;Target=FBgn0027552.1 841 1029 +
Chr1	stalkie_big_nohaplotig	CDS	15018764	15018961	.	-	0	Parent=FBgn0027552.1.mrna1;Target=FBgn0027552.1 643 840 +
Chr1	stalkie_big_nohaplotig	CDS	15019031	15019175	.	-	1	Parent=FBgn0027552.1.mrna1;Target=FBgn0027552.1 498 642 +
Chr1	stalkie_big_nohaplotig	CDS	15019229	15019401	.	-	0	Parent=FBgn0027552.1.mrna1;Target=FBgn0027552.1 325 497 +
Chr1	stalkie_big_nohaplotig	CDS	15019467	15019634	.	-	0	Parent=FBgn0027552.1.mrna1;Target=FBgn0027552.1 157 324 +
Chr1	stalkie_big_nohaplotig	CDS	15020346	15020444	.	-	0	Parent=FBgn0027552.1.mrna1;Target=FBgn0027552.1 58 156 +
Chr1	stalkie_big_nohaplotig	CDS	15020507	15020563	.	-	0	Parent=FBgn0027552.1.mrna1;Target=FBgn0027552.1 1 57 +
Chr1	gffcl	locus	15023022	15024898	.	+	.	ID=RLOC_00006015;geneIDs=FBgn0031853.1.path1;transcripts=FBgn0031853.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15023022	15024898	.	+	.	ID=FBgn0031853.1.mrna1;geneID=FBgn0031853.1.path1;Name=FBgn0031853.1;Dir=sensecoverage=100.0;identity=100.0;matches=1821;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006015
Chr1	stalkie_big_nohaplotig	exon	15023022	15024144	100	+	.	Parent=FBgn0031853.1.mrna1;Target=FBgn0031853.1 1 1123 +
Chr1	stalkie_big_nohaplotig	exon	15024201	15024898	100	+	.	Parent=FBgn0031853.1.mrna1;Target=FBgn0031853.1 1124 1821 +
Chr1	stalkie_big_nohaplotig	CDS	15023022	15024144	.	+	0	Parent=FBgn0031853.1.mrna1;Target=FBgn0031853.1 1 1123 +
Chr1	stalkie_big_nohaplotig	CDS	15024201	15024898	.	+	2	Parent=FBgn0031853.1.mrna1;Target=FBgn0031853.1 1124 1821 +
Chr1	gffcl	locus	15029935	15068612	.	+	.	ID=RLOC_00006016;geneIDs=FBgn0011828.1.path1;transcripts=FBgn0011828.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15029935	15068612	.	+	.	ID=FBgn0011828.1.mrna1;geneID=FBgn0011828.1.path1;Name=FBgn0011828.1;Dir=sensecoverage=100.0;identity=100.0;matches=4550;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006016
Chr1	stalkie_big_nohaplotig	exon	15029935	15030128	100	+	.	Parent=FBgn0011828.1.mrna1;Target=FBgn0011828.1 1 194 +
Chr1	stalkie_big_nohaplotig	exon	15060367	15060582	100	+	.	Parent=FBgn0011828.1.mrna1;Target=FBgn0011828.1 195 410 +
Chr1	stalkie_big_nohaplotig	exon	15060803	15060874	100	+	.	Parent=FBgn0011828.1.mrna1;Target=FBgn0011828.1 411 482 +
Chr1	stalkie_big_nohaplotig	exon	15060998	15061239	100	+	.	Parent=FBgn0011828.1.mrna1;Target=FBgn0011828.1 483 724 +
Chr1	stalkie_big_nohaplotig	exon	15063252	15063875	100	+	.	Parent=FBgn0011828.1.mrna1;Target=FBgn0011828.1 725 1348 +
Chr1	stalkie_big_nohaplotig	exon	15064613	15064816	100	+	.	Parent=FBgn0011828.1.mrna1;Target=FBgn0011828.1 1349 1552 +
Chr1	stalkie_big_nohaplotig	exon	15064926	15065101	100	+	.	Parent=FBgn0011828.1.mrna1;Target=FBgn0011828.1 1553 1728 +
Chr1	stalkie_big_nohaplotig	exon	15065175	15065356	100	+	.	Parent=FBgn0011828.1.mrna1;Target=FBgn0011828.1 1729 1910 +
Chr1	stalkie_big_nohaplotig	exon	15065972	15068612	99	+	.	Parent=FBgn0011828.1.mrna1;Target=FBgn0011828.1 1911 4551 +
Chr1	stalkie_big_nohaplotig	CDS	15029935	15030128	.	+	0	Parent=FBgn0011828.1.mrna1;Target=FBgn0011828.1 1 194 +
Chr1	stalkie_big_nohaplotig	CDS	15060367	15060582	.	+	1	Parent=FBgn0011828.1.mrna1;Target=FBgn0011828.1 195 410 +
Chr1	stalkie_big_nohaplotig	CDS	15060803	15060874	.	+	1	Parent=FBgn0011828.1.mrna1;Target=FBgn0011828.1 411 482 +
Chr1	stalkie_big_nohaplotig	CDS	15060998	15061239	.	+	1	Parent=FBgn0011828.1.mrna1;Target=FBgn0011828.1 483 724 +
Chr1	stalkie_big_nohaplotig	CDS	15063252	15063875	.	+	2	Parent=FBgn0011828.1.mrna1;Target=FBgn0011828.1 725 1348 +
Chr1	stalkie_big_nohaplotig	CDS	15064613	15064816	.	+	2	Parent=FBgn0011828.1.mrna1;Target=FBgn0011828.1 1349 1552 +
Chr1	stalkie_big_nohaplotig	CDS	15064926	15065101	.	+	2	Parent=FBgn0011828.1.mrna1;Target=FBgn0011828.1 1553 1728 +
Chr1	stalkie_big_nohaplotig	CDS	15065175	15065356	.	+	0	Parent=FBgn0011828.1.mrna1;Target=FBgn0011828.1 1729 1910 +
Chr1	stalkie_big_nohaplotig	CDS	15065972	15068612	.	+	1	Parent=FBgn0011828.1.mrna1;Target=FBgn0011828.1 1911 4551 +
Chr1	gffcl	locus	15069202	15071229	.	-	.	ID=RLOC_00006017;geneIDs=FBgn0035356.1.path1;transcripts=FBgn0035356.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15069202	15071229	.	-	.	ID=FBgn0035356.1.mrna1;geneID=FBgn0035356.1.path1;Name=FBgn0035356.1;Dir=sensecoverage=100.0;identity=100.0;matches=441;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006017
Chr1	stalkie_big_nohaplotig	exon	15069202	15069420	100	-	.	Parent=FBgn0035356.1.mrna1;Target=FBgn0035356.1 223 441 +
Chr1	stalkie_big_nohaplotig	exon	15069474	15069590	100	-	.	Parent=FBgn0035356.1.mrna1;Target=FBgn0035356.1 106 222 +
Chr1	stalkie_big_nohaplotig	exon	15071125	15071229	100	-	.	Parent=FBgn0035356.1.mrna1;Target=FBgn0035356.1 1 105 +
Chr1	stalkie_big_nohaplotig	CDS	15069202	15069420	.	-	0	Parent=FBgn0035356.1.mrna1;Target=FBgn0035356.1 223 441 +
Chr1	stalkie_big_nohaplotig	CDS	15069474	15069590	.	-	0	Parent=FBgn0035356.1.mrna1;Target=FBgn0035356.1 106 222 +
Chr1	stalkie_big_nohaplotig	CDS	15071125	15071229	.	-	0	Parent=FBgn0035356.1.mrna1;Target=FBgn0035356.1 1 105 +
Chr1	gffcl	locus	15071392	15072358	.	-	.	ID=RLOC_00006018;geneIDs=FBgn0035355.1.path1;transcripts=FBgn0035355.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15071392	15072358	.	-	.	ID=FBgn0035355.1.mrna1;geneID=FBgn0035355.1.path1;Name=FBgn0035355.1;Dir=sensecoverage=100.0;identity=100.0;matches=432;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006018
Chr1	stalkie_big_nohaplotig	exon	15071392	15071730	100	-	.	Parent=FBgn0035355.1.mrna1;Target=FBgn0035355.1 94 432 +
Chr1	stalkie_big_nohaplotig	exon	15072266	15072358	100	-	.	Parent=FBgn0035355.1.mrna1;Target=FBgn0035355.1 1 93 +
Chr1	stalkie_big_nohaplotig	CDS	15071392	15071730	.	-	0	Parent=FBgn0035355.1.mrna1;Target=FBgn0035355.1 94 432 +
Chr1	stalkie_big_nohaplotig	CDS	15072266	15072358	.	-	0	Parent=FBgn0035355.1.mrna1;Target=FBgn0035355.1 1 93 +
Chr1	gffcl	locus	15073125	15075888	.	+	.	ID=RLOC_00006019;geneIDs=FBgn0028504.1.path1;transcripts=FBgn0028504.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15073125	15075888	.	+	.	ID=FBgn0028504.1.mrna1;geneID=FBgn0028504.1.path1;Name=FBgn0028504.1;Dir=sensecoverage=100.0;identity=100.0;matches=2033;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006019
Chr1	stalkie_big_nohaplotig	exon	15073125	15074148	99	+	.	Parent=FBgn0028504.1.mrna1;Target=FBgn0028504.1 1 1024 +
Chr1	stalkie_big_nohaplotig	exon	15074203	15074704	100	+	.	Parent=FBgn0028504.1.mrna1;Target=FBgn0028504.1 1025 1526 +
Chr1	stalkie_big_nohaplotig	exon	15074766	15075132	100	+	.	Parent=FBgn0028504.1.mrna1;Target=FBgn0028504.1 1527 1893 +
Chr1	stalkie_big_nohaplotig	exon	15075748	15075888	100	+	.	Parent=FBgn0028504.1.mrna1;Target=FBgn0028504.1 1894 2034 +
Chr1	stalkie_big_nohaplotig	CDS	15073125	15074148	.	+	0	Parent=FBgn0028504.1.mrna1;Target=FBgn0028504.1 1 1024 +
Chr1	stalkie_big_nohaplotig	CDS	15074203	15074704	.	+	2	Parent=FBgn0028504.1.mrna1;Target=FBgn0028504.1 1025 1526 +
Chr1	stalkie_big_nohaplotig	CDS	15074766	15075132	.	+	1	Parent=FBgn0028504.1.mrna1;Target=FBgn0028504.1 1527 1893 +
Chr1	stalkie_big_nohaplotig	CDS	15075748	15075888	.	+	0	Parent=FBgn0028504.1.mrna1;Target=FBgn0028504.1 1894 2034 +
Chr1	gffcl	locus	15076069	15077303	.	+	.	ID=RLOC_00006020;geneIDs=comp147437_c0_seq1.path1;transcripts=comp147437_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15076069	15077303	.	+	.	ID=comp147437_c0_seq1.mrna1;geneID=comp147437_c0_seq1.path1;Name=comp147437_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1234;mismatches=1;indels=2;unknowns=0;Target=comp147437_c0_seq1 1237 1 .;CDS_Target=comp147437_c0_seq1 822 709 .;locus=RLOC_00006020
Chr1	stalkie_big_nohaplotig	exon	15076069	15077303	99	+	.	Parent=comp147437_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15076775	15076888	.	+	0	Parent=comp147437_c0_seq1.mrna1
Chr1	gffcl	locus	15078425	15086451	.	-	.	ID=RLOC_00006021;geneIDs=FBgn0016794.1.path1;transcripts=FBgn0016794.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15078425	15086451	.	-	.	ID=FBgn0016794.1.mrna1;geneID=FBgn0016794.1.path1;Name=FBgn0016794.1;Dir=sensecoverage=100.0;identity=100.0;matches=2616;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006021
Chr1	stalkie_big_nohaplotig	exon	15078425	15078949	100	-	.	Parent=FBgn0016794.1.mrna1;Target=FBgn0016794.1 2092 2616 +
Chr1	stalkie_big_nohaplotig	exon	15079020	15079283	100	-	.	Parent=FBgn0016794.1.mrna1;Target=FBgn0016794.1 1828 2091 +
Chr1	stalkie_big_nohaplotig	exon	15079362	15079686	100	-	.	Parent=FBgn0016794.1.mrna1;Target=FBgn0016794.1 1503 1827 +
Chr1	stalkie_big_nohaplotig	exon	15079742	15079940	100	-	.	Parent=FBgn0016794.1.mrna1;Target=FBgn0016794.1 1304 1502 +
Chr1	stalkie_big_nohaplotig	exon	15080079	15080190	100	-	.	Parent=FBgn0016794.1.mrna1;Target=FBgn0016794.1 1192 1303 +
Chr1	stalkie_big_nohaplotig	exon	15080251	15080388	100	-	.	Parent=FBgn0016794.1.mrna1;Target=FBgn0016794.1 1054 1191 +
Chr1	stalkie_big_nohaplotig	exon	15080461	15080586	100	-	.	Parent=FBgn0016794.1.mrna1;Target=FBgn0016794.1 928 1053 +
Chr1	stalkie_big_nohaplotig	exon	15080661	15081163	100	-	.	Parent=FBgn0016794.1.mrna1;Target=FBgn0016794.1 425 927 +
Chr1	stalkie_big_nohaplotig	exon	15081237	15081543	100	-	.	Parent=FBgn0016794.1.mrna1;Target=FBgn0016794.1 118 424 +
Chr1	stalkie_big_nohaplotig	exon	15086335	15086451	100	-	.	Parent=FBgn0016794.1.mrna1;Target=FBgn0016794.1 1 117 +
Chr1	stalkie_big_nohaplotig	CDS	15078425	15078949	.	-	0	Parent=FBgn0016794.1.mrna1;Target=FBgn0016794.1 2092 2616 +
Chr1	stalkie_big_nohaplotig	CDS	15079020	15079283	.	-	0	Parent=FBgn0016794.1.mrna1;Target=FBgn0016794.1 1828 2091 +
Chr1	stalkie_big_nohaplotig	CDS	15079362	15079686	.	-	1	Parent=FBgn0016794.1.mrna1;Target=FBgn0016794.1 1503 1827 +
Chr1	stalkie_big_nohaplotig	CDS	15079742	15079940	.	-	2	Parent=FBgn0016794.1.mrna1;Target=FBgn0016794.1 1304 1502 +
Chr1	stalkie_big_nohaplotig	CDS	15080079	15080190	.	-	0	Parent=FBgn0016794.1.mrna1;Target=FBgn0016794.1 1192 1303 +
Chr1	stalkie_big_nohaplotig	CDS	15080251	15080388	.	-	0	Parent=FBgn0016794.1.mrna1;Target=FBgn0016794.1 1054 1191 +
Chr1	stalkie_big_nohaplotig	CDS	15080461	15080586	.	-	0	Parent=FBgn0016794.1.mrna1;Target=FBgn0016794.1 928 1053 +
Chr1	stalkie_big_nohaplotig	CDS	15080661	15081163	.	-	2	Parent=FBgn0016794.1.mrna1;Target=FBgn0016794.1 425 927 +
Chr1	stalkie_big_nohaplotig	CDS	15081237	15081543	.	-	0	Parent=FBgn0016794.1.mrna1;Target=FBgn0016794.1 118 424 +
Chr1	stalkie_big_nohaplotig	CDS	15086335	15086451	.	-	0	Parent=FBgn0016794.1.mrna1;Target=FBgn0016794.1 1 117 +
Chr1	gffcl	locus	15088157	15090869	.	.	.	ID=RLOC_00006022;geneIDs=FBgn0035987.1.path1,comp118328_c0_seq1.path1;transcripts=FBgn0035987.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15088157	15090163	.	+	.	ID=FBgn0035987.1.mrna1;geneID=FBgn0035987.1.path1;Name=FBgn0035987.1;Dir=sensecoverage=97.7;identity=99.9;matches=717;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006022
Chr1	stalkie_big_nohaplotig	exon	15088157	15088326	99	+	.	Parent=FBgn0035987.1.mrna1;Target=FBgn0035987.1 1 170 +
Chr1	stalkie_big_nohaplotig	exon	15088446	15088710	100	+	.	Parent=FBgn0035987.1.mrna1;Target=FBgn0035987.1 171 435 +
Chr1	stalkie_big_nohaplotig	exon	15088766	15088931	100	+	.	Parent=FBgn0035987.1.mrna1;Target=FBgn0035987.1 436 601 +
Chr1	stalkie_big_nohaplotig	exon	15090047	15090163	100	+	.	Parent=FBgn0035987.1.mrna1;Target=FBgn0035987.1 602 718 +
Chr1	stalkie_big_nohaplotig	CDS	15088157	15088326	.	+	0	Parent=FBgn0035987.1.mrna1;Target=FBgn0035987.1 1 170 +
Chr1	stalkie_big_nohaplotig	CDS	15088446	15088710	.	+	1	Parent=FBgn0035987.1.mrna1;Target=FBgn0035987.1 171 435 +
Chr1	stalkie_big_nohaplotig	CDS	15088766	15088931	.	+	0	Parent=FBgn0035987.1.mrna1;Target=FBgn0035987.1 436 601 +
Chr1	stalkie_big_nohaplotig	CDS	15090047	15090162	.	+	2	Parent=FBgn0035987.1.mrna1;Target=FBgn0035987.1 602 717 +
Chr1	gffcl	locus	15091681	15093791	.	-	.	ID=RLOC_00006023;geneIDs=comp129645_c0_seq1.path1;transcripts=comp129645_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15091681	15093791	.	-	.	ID=comp129645_c0_seq1.mrna1;geneID=comp129645_c0_seq1.path1;Name=comp129645_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.9;matches=2109;mismatches=2;indels=0;unknowns=0;Target=comp129645_c0_seq1 2121 11 .;CDS_Target=comp129645_c0_seq1 145 11 .;locus=RLOC_00006023
Chr1	stalkie_big_nohaplotig	exon	15091681	15093791	99	-	.	Parent=comp129645_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15093657	15093791	.	-	0	Parent=comp129645_c0_seq1.mrna1
Chr1	gffcl	locus	15095347	15095567	.	+	.	ID=RLOC_00006024;geneIDs=comp915834_c0_seq1.path1;transcripts=comp915834_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15095347	15095567	.	+	.	ID=comp915834_c0_seq1.mrna1;geneID=comp915834_c0_seq1.path1;Name=comp915834_c0_seq1;Dir=indeterminatecoverage=96.1;identity=100.0;matches=221;mismatches=0;indels=0;unknowns=0;Target=comp915834_c0_seq1 230 10 .;CDS_Target=comp915834_c0_seq1 58 11 .;locus=RLOC_00006024
Chr1	stalkie_big_nohaplotig	exon	15095347	15095567	100	+	.	Parent=comp915834_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15095348	15095395	.	+	0	Parent=comp915834_c0_seq1.mrna1
Chr1	gffcl	locus	15096847	15104850	.	-	.	ID=RLOC_00006025;geneIDs=FBgn0035989.1.path1,comp118470_c0_seq1.path1;transcripts=FBgn0035989.1.mrna1,comp118470_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15096847	15104850	.	-	.	ID=FBgn0035989.1.mrna1;geneID=FBgn0035989.1.path1;Name=FBgn0035989.1;Dir=sensecoverage=99.2;identity=100.0;matches=860;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006025
Chr1	stalkie_big_nohaplotig	exon	15096847	15096899	100	-	.	Parent=FBgn0035989.1.mrna1;Target=FBgn0035989.1 808 860 +
Chr1	stalkie_big_nohaplotig	exon	15100979	15101129	100	-	.	Parent=FBgn0035989.1.mrna1;Target=FBgn0035989.1 657 807 +
Chr1	stalkie_big_nohaplotig	exon	15101858	15102226	100	-	.	Parent=FBgn0035989.1.mrna1;Target=FBgn0035989.1 288 656 +
Chr1	stalkie_big_nohaplotig	exon	15104484	15104639	100	-	.	Parent=FBgn0035989.1.mrna1;Target=FBgn0035989.1 132 287 +
Chr1	stalkie_big_nohaplotig	exon	15104720	15104850	100	-	.	Parent=FBgn0035989.1.mrna1;Target=FBgn0035989.1 1 131 +
Chr1	stalkie_big_nohaplotig	CDS	15096849	15096899	.	-	0	Parent=FBgn0035989.1.mrna1;Target=FBgn0035989.1 808 858 +
Chr1	stalkie_big_nohaplotig	CDS	15100979	15101129	.	-	1	Parent=FBgn0035989.1.mrna1;Target=FBgn0035989.1 657 807 +
Chr1	stalkie_big_nohaplotig	CDS	15101858	15102226	.	-	1	Parent=FBgn0035989.1.mrna1;Target=FBgn0035989.1 288 656 +
Chr1	stalkie_big_nohaplotig	CDS	15104484	15104639	.	-	1	Parent=FBgn0035989.1.mrna1;Target=FBgn0035989.1 132 287 +
Chr1	stalkie_big_nohaplotig	CDS	15104720	15104850	.	-	0	Parent=FBgn0035989.1.mrna1;Target=FBgn0035989.1 1 131 +
Chr1	stalkie_big_nohaplotig	mRNA	15101484	15101881	.	-	.	ID=comp118470_c0_seq1.mrna1;geneID=comp118470_c0_seq1.path1;Name=comp118470_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=398;mismatches=0;indels=0;unknowns=0;Target=comp118470_c0_seq1 398 1 .;CDS_Target=comp118470_c0_seq1 155 78 .;locus=RLOC_00006025
Chr1	stalkie_big_nohaplotig	exon	15101484	15101881	100	-	.	Parent=comp118470_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15101727	15101804	.	-	0	Parent=comp118470_c0_seq1.mrna1
Chr1	gffcl	locus	15100032	15100434	.	+	.	ID=RLOC_00006027;geneIDs=comp118742_c0_seq1.path1;transcripts=comp118742_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15100032	15100434	.	+	.	ID=comp118742_c0_seq1.mrna1;geneID=comp118742_c0_seq1.path1;Name=comp118742_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=402;mismatches=1;indels=0;unknowns=0;Target=comp118742_c0_seq1 403 1 .;CDS_Target=comp118742_c0_seq1 142 23 .;locus=RLOC_00006027
Chr1	stalkie_big_nohaplotig	exon	15100032	15100434	99	+	.	Parent=comp118742_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15100054	15100173	.	+	0	Parent=comp118742_c0_seq1.mrna1
Chr1	gffcl	locus	15111851	15112822	.	+	.	ID=RLOC_00006028;geneIDs=FBgn0023129.1.path1;transcripts=FBgn0023129.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15111851	15112822	.	+	.	ID=FBgn0023129.1.mrna1;geneID=FBgn0023129.1.path1;Name=FBgn0023129.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=972;mismatches=0;indels=0;unknowns=0;Target=FBgn0023129.1 972 1 .;locus=RLOC_00006028
Chr1	stalkie_big_nohaplotig	exon	15111851	15112822	100	+	.	Parent=FBgn0023129.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15111851	15112822	.	+	0	Parent=FBgn0023129.1.mrna1
Chr1	gffcl	locus	15120058	15120794	.	+	.	ID=RLOC_00006029;geneIDs=comp144496_c0_seq1.path1;transcripts=comp144496_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15120058	15120794	.	+	.	ID=comp144496_c0_seq1.mrna1;geneID=comp144496_c0_seq1.path1;Name=comp144496_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=736;mismatches=1;indels=1;unknowns=0;Target=comp144496_c0_seq1 738 1 .;CDS_Target=comp144496_c0_seq1 726 598 .;locus=RLOC_00006029
Chr1	stalkie_big_nohaplotig	exon	15120058	15120794	99	+	.	Parent=comp144496_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15120654	15120782	.	+	0	Parent=comp144496_c0_seq1.mrna1
Chr1	gffcl	locus	15120836	15121627	.	-	.	ID=RLOC_00006030;geneIDs=FBgn0005533.1.path1;transcripts=FBgn0005533.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15120836	15121627	.	-	.	ID=FBgn0005533.1.mrna1;geneID=FBgn0005533.1.path1;Name=FBgn0005533.1;Dir=sensecoverage=100.0;identity=99.8;matches=449;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006030
Chr1	stalkie_big_nohaplotig	exon	15120836	15121073	100	-	.	Parent=FBgn0005533.1.mrna1;Target=FBgn0005533.1 213 450 +
Chr1	stalkie_big_nohaplotig	exon	15121204	15121355	100	-	.	Parent=FBgn0005533.1.mrna1;Target=FBgn0005533.1 61 212 +
Chr1	stalkie_big_nohaplotig	exon	15121568	15121627	98	-	.	Parent=FBgn0005533.1.mrna1;Target=FBgn0005533.1 1 60 +
Chr1	stalkie_big_nohaplotig	CDS	15120836	15121073	.	-	1	Parent=FBgn0005533.1.mrna1;Target=FBgn0005533.1 213 450 +
Chr1	stalkie_big_nohaplotig	CDS	15121204	15121355	.	-	0	Parent=FBgn0005533.1.mrna1;Target=FBgn0005533.1 61 212 +
Chr1	stalkie_big_nohaplotig	CDS	15121568	15121627	.	-	0	Parent=FBgn0005533.1.mrna1;Target=FBgn0005533.1 1 60 +
Chr1	gffcl	locus	15122094	15125420	.	+	.	ID=RLOC_00006031;geneIDs=FBgn0036031.1.path1;transcripts=FBgn0036031.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15122094	15125420	.	+	.	ID=FBgn0036031.1.mrna1;geneID=FBgn0036031.1.path1;Name=FBgn0036031.1;Dir=sensecoverage=100.0;identity=99.8;matches=2384;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006031
Chr1	stalkie_big_nohaplotig	exon	15122094	15122797	99	+	.	Parent=FBgn0036031.1.mrna1;Target=FBgn0036031.1 1 704 +
Chr1	stalkie_big_nohaplotig	exon	15122865	15123168	100	+	.	Parent=FBgn0036031.1.mrna1;Target=FBgn0036031.1 705 1008 +
Chr1	stalkie_big_nohaplotig	exon	15123243	15123514	100	+	.	Parent=FBgn0036031.1.mrna1;Target=FBgn0036031.1 1009 1280 +
Chr1	stalkie_big_nohaplotig	exon	15123572	15123815	100	+	.	Parent=FBgn0036031.1.mrna1;Target=FBgn0036031.1 1281 1524 +
Chr1	stalkie_big_nohaplotig	exon	15123879	15123957	100	+	.	Parent=FBgn0036031.1.mrna1;Target=FBgn0036031.1 1525 1603 +
Chr1	stalkie_big_nohaplotig	exon	15124022	15124080	100	+	.	Parent=FBgn0036031.1.mrna1;Target=FBgn0036031.1 1604 1662 +
Chr1	stalkie_big_nohaplotig	exon	15124143	15124365	100	+	.	Parent=FBgn0036031.1.mrna1;Target=FBgn0036031.1 1663 1885 +
Chr1	stalkie_big_nohaplotig	exon	15124419	15124641	100	+	.	Parent=FBgn0036031.1.mrna1;Target=FBgn0036031.1 1886 2108 +
Chr1	stalkie_big_nohaplotig	exon	15125141	15125420	100	+	.	Parent=FBgn0036031.1.mrna1;Target=FBgn0036031.1 2109 2388 +
Chr1	stalkie_big_nohaplotig	CDS	15122094	15122797	.	+	0	Parent=FBgn0036031.1.mrna1;Target=FBgn0036031.1 1 704 +
Chr1	stalkie_big_nohaplotig	CDS	15122865	15123168	.	+	1	Parent=FBgn0036031.1.mrna1;Target=FBgn0036031.1 705 1008 +
Chr1	stalkie_big_nohaplotig	CDS	15123243	15123514	.	+	0	Parent=FBgn0036031.1.mrna1;Target=FBgn0036031.1 1009 1280 +
Chr1	stalkie_big_nohaplotig	CDS	15123572	15123815	.	+	1	Parent=FBgn0036031.1.mrna1;Target=FBgn0036031.1 1281 1524 +
Chr1	stalkie_big_nohaplotig	CDS	15123879	15123957	.	+	0	Parent=FBgn0036031.1.mrna1;Target=FBgn0036031.1 1525 1603 +
Chr1	stalkie_big_nohaplotig	CDS	15124022	15124080	.	+	2	Parent=FBgn0036031.1.mrna1;Target=FBgn0036031.1 1604 1662 +
Chr1	stalkie_big_nohaplotig	CDS	15124143	15124365	.	+	0	Parent=FBgn0036031.1.mrna1;Target=FBgn0036031.1 1663 1885 +
Chr1	stalkie_big_nohaplotig	CDS	15124419	15124641	.	+	2	Parent=FBgn0036031.1.mrna1;Target=FBgn0036031.1 1886 2108 +
Chr1	stalkie_big_nohaplotig	CDS	15125141	15125420	.	+	1	Parent=FBgn0036031.1.mrna1;Target=FBgn0036031.1 2109 2388 +
Chr1	gffcl	locus	15125965	15127669	.	-	.	ID=RLOC_00006032;geneIDs=FBgn0015321.1.path1;transcripts=FBgn0015321.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15125965	15127669	.	-	.	ID=FBgn0015321.1.mrna1;geneID=FBgn0015321.1.path1;Name=FBgn0015321.1;Dir=sensecoverage=100.0;identity=100.0;matches=687;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006032
Chr1	stalkie_big_nohaplotig	exon	15125965	15126098	100	-	.	Parent=FBgn0015321.1.mrna1;Target=FBgn0015321.1 554 687 +
Chr1	stalkie_big_nohaplotig	exon	15126157	15126320	100	-	.	Parent=FBgn0015321.1.mrna1;Target=FBgn0015321.1 390 553 +
Chr1	stalkie_big_nohaplotig	exon	15126781	15126863	100	-	.	Parent=FBgn0015321.1.mrna1;Target=FBgn0015321.1 307 389 +
Chr1	stalkie_big_nohaplotig	exon	15126915	15127067	100	-	.	Parent=FBgn0015321.1.mrna1;Target=FBgn0015321.1 154 306 +
Chr1	stalkie_big_nohaplotig	exon	15127517	15127669	100	-	.	Parent=FBgn0015321.1.mrna1;Target=FBgn0015321.1 1 153 +
Chr1	stalkie_big_nohaplotig	CDS	15125965	15126098	.	-	2	Parent=FBgn0015321.1.mrna1;Target=FBgn0015321.1 554 687 +
Chr1	stalkie_big_nohaplotig	CDS	15126157	15126320	.	-	1	Parent=FBgn0015321.1.mrna1;Target=FBgn0015321.1 390 553 +
Chr1	stalkie_big_nohaplotig	CDS	15126781	15126863	.	-	0	Parent=FBgn0015321.1.mrna1;Target=FBgn0015321.1 307 389 +
Chr1	stalkie_big_nohaplotig	CDS	15126915	15127067	.	-	0	Parent=FBgn0015321.1.mrna1;Target=FBgn0015321.1 154 306 +
Chr1	stalkie_big_nohaplotig	CDS	15127517	15127669	.	-	0	Parent=FBgn0015321.1.mrna1;Target=FBgn0015321.1 1 153 +
Chr1	gffcl	locus	15127175	15156115	.	+	.	ID=RLOC_00006033;geneIDs=FBgn0036030.1.path1,comp93206_c0_seq1.path1,comp116878_c0_seq1.path1,comp144128_c1_seq1.path1;transcripts=FBgn0036030.1.mrna1,comp144128_c1_seq1.mrna1,comp116878_c0_seq1.mrna1,comp93206_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15127175	15153697	.	+	.	ID=FBgn0036030.1.mrna1;geneID=FBgn0036030.1.path1;Name=FBgn0036030.1;Dir=sensecoverage=100.0;identity=100.0;matches=1191;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006033
Chr1	stalkie_big_nohaplotig	exon	15127175	15127241	100	+	.	Parent=FBgn0036030.1.mrna1;Target=FBgn0036030.1 1 67 +
Chr1	stalkie_big_nohaplotig	exon	15136608	15136830	100	+	.	Parent=FBgn0036030.1.mrna1;Target=FBgn0036030.1 68 290 +
Chr1	stalkie_big_nohaplotig	exon	15142913	15143096	100	+	.	Parent=FBgn0036030.1.mrna1;Target=FBgn0036030.1 291 474 +
Chr1	stalkie_big_nohaplotig	exon	15143516	15143584	100	+	.	Parent=FBgn0036030.1.mrna1;Target=FBgn0036030.1 475 543 +
Chr1	stalkie_big_nohaplotig	exon	15148924	15149022	100	+	.	Parent=FBgn0036030.1.mrna1;Target=FBgn0036030.1 544 642 +
Chr1	stalkie_big_nohaplotig	exon	15152814	15152938	100	+	.	Parent=FBgn0036030.1.mrna1;Target=FBgn0036030.1 643 767 +
Chr1	stalkie_big_nohaplotig	exon	15153133	15153331	100	+	.	Parent=FBgn0036030.1.mrna1;Target=FBgn0036030.1 768 966 +
Chr1	stalkie_big_nohaplotig	exon	15153399	15153533	100	+	.	Parent=FBgn0036030.1.mrna1;Target=FBgn0036030.1 967 1101 +
Chr1	stalkie_big_nohaplotig	exon	15153608	15153697	100	+	.	Parent=FBgn0036030.1.mrna1;Target=FBgn0036030.1 1102 1191 +
Chr1	stalkie_big_nohaplotig	CDS	15127175	15127241	.	+	0	Parent=FBgn0036030.1.mrna1;Target=FBgn0036030.1 1 67 +
Chr1	stalkie_big_nohaplotig	CDS	15136608	15136830	.	+	2	Parent=FBgn0036030.1.mrna1;Target=FBgn0036030.1 68 290 +
Chr1	stalkie_big_nohaplotig	CDS	15142913	15143096	.	+	1	Parent=FBgn0036030.1.mrna1;Target=FBgn0036030.1 291 474 +
Chr1	stalkie_big_nohaplotig	CDS	15143516	15143584	.	+	0	Parent=FBgn0036030.1.mrna1;Target=FBgn0036030.1 475 543 +
Chr1	stalkie_big_nohaplotig	CDS	15148924	15149022	.	+	0	Parent=FBgn0036030.1.mrna1;Target=FBgn0036030.1 544 642 +
Chr1	stalkie_big_nohaplotig	CDS	15152814	15152938	.	+	0	Parent=FBgn0036030.1.mrna1;Target=FBgn0036030.1 643 767 +
Chr1	stalkie_big_nohaplotig	CDS	15153133	15153331	.	+	1	Parent=FBgn0036030.1.mrna1;Target=FBgn0036030.1 768 966 +
Chr1	stalkie_big_nohaplotig	CDS	15153399	15153533	.	+	0	Parent=FBgn0036030.1.mrna1;Target=FBgn0036030.1 967 1101 +
Chr1	stalkie_big_nohaplotig	CDS	15153608	15153697	.	+	0	Parent=FBgn0036030.1.mrna1;Target=FBgn0036030.1 1102 1191 +
Chr1	stalkie_big_nohaplotig	mRNA	15130237	15156115	.	+	.	ID=comp144128_c1_seq1.mrna1;geneID=comp144128_c1_seq1.path1;Name=comp144128_c1_seq1;Dir=sensecoverage=95.9;identity=94.3;matches=3800;mismatches=117;indels=112;unknowns=0;locus=RLOC_00006033
Chr1	stalkie_big_nohaplotig	exon	15130237	15130658	99	+	.	Parent=comp144128_c1_seq1.mrna1;Target=comp144128_c1_seq1 1 423 +
Chr1	stalkie_big_nohaplotig	exon	15136608	15136830	100	+	.	Parent=comp144128_c1_seq1.mrna1;Target=comp144128_c1_seq1 424 646 +
Chr1	stalkie_big_nohaplotig	exon	15142913	15143096	100	+	.	Parent=comp144128_c1_seq1.mrna1;Target=comp144128_c1_seq1 647 830 +
Chr1	stalkie_big_nohaplotig	exon	15143516	15143584	100	+	.	Parent=comp144128_c1_seq1.mrna1;Target=comp144128_c1_seq1 831 899 +
Chr1	stalkie_big_nohaplotig	exon	15148924	15149022	100	+	.	Parent=comp144128_c1_seq1.mrna1;Target=comp144128_c1_seq1 900 998 +
Chr1	stalkie_big_nohaplotig	exon	15152814	15152938	100	+	.	Parent=comp144128_c1_seq1.mrna1;Target=comp144128_c1_seq1 999 1123 +
Chr1	stalkie_big_nohaplotig	exon	15153133	15153331	100	+	.	Parent=comp144128_c1_seq1.mrna1;Target=comp144128_c1_seq1 1124 1322 +
Chr1	stalkie_big_nohaplotig	exon	15153399	15153533	100	+	.	Parent=comp144128_c1_seq1.mrna1;Target=comp144128_c1_seq1 1323 1457 +
Chr1	stalkie_big_nohaplotig	exon	15153608	15156115	91	+	.	Parent=comp144128_c1_seq1.mrna1;Target=comp144128_c1_seq1 1458 3982 +
Chr1	stalkie_big_nohaplotig	CDS	15136616	15136830	.	+	0	Parent=comp144128_c1_seq1.mrna1;Target=comp144128_c1_seq1 432 646 +
Chr1	stalkie_big_nohaplotig	CDS	15142913	15143096	.	+	1	Parent=comp144128_c1_seq1.mrna1;Target=comp144128_c1_seq1 647 830 +
Chr1	stalkie_big_nohaplotig	CDS	15143516	15143584	.	+	0	Parent=comp144128_c1_seq1.mrna1;Target=comp144128_c1_seq1 831 899 +
Chr1	stalkie_big_nohaplotig	CDS	15148924	15149022	.	+	0	Parent=comp144128_c1_seq1.mrna1;Target=comp144128_c1_seq1 900 998 +
Chr1	stalkie_big_nohaplotig	CDS	15152814	15152938	.	+	0	Parent=comp144128_c1_seq1.mrna1;Target=comp144128_c1_seq1 999 1123 +
Chr1	stalkie_big_nohaplotig	CDS	15153133	15153331	.	+	1	Parent=comp144128_c1_seq1.mrna1;Target=comp144128_c1_seq1 1124 1322 +
Chr1	stalkie_big_nohaplotig	CDS	15153399	15153533	.	+	0	Parent=comp144128_c1_seq1.mrna1;Target=comp144128_c1_seq1 1323 1457 +
Chr1	stalkie_big_nohaplotig	CDS	15153608	15153700	.	+	0	Parent=comp144128_c1_seq1.mrna1;Target=comp144128_c1_seq1 1458 1550 +
Chr1	stalkie_big_nohaplotig	mRNA	15141512	15142936	.	+	.	ID=comp116878_c0_seq1.mrna1;geneID=comp116878_c0_seq1.path1;Name=comp116878_c0_seq1;Dir=sensecoverage=99.9;identity=99.7;matches=1274;mismatches=4;indels=0;unknowns=0;Target=comp116878_c0_seq1 451 555 +;locus=RLOC_00006033
Chr1	stalkie_big_nohaplotig	exon	15141512	15142765	99	+	.	Parent=comp116878_c0_seq1.mrna1;Target=comp116878_c0_seq1 2 1255 +
Chr1	stalkie_big_nohaplotig	exon	15142913	15142936	100	+	.	Parent=comp116878_c0_seq1.mrna1;Target=comp116878_c0_seq1 1256 1279 +
Chr1	stalkie_big_nohaplotig	CDS	15141961	15142065	.	+	0	Parent=comp116878_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15148270	15148944	.	+	.	ID=comp93206_c0_seq1.mrna1;geneID=comp93206_c0_seq1.path1;Name=comp93206_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=673;mismatches=2;indels=0;unknowns=0;Target=comp93206_c0_seq1 675 1 .;CDS_Target=comp93206_c0_seq1 558 445 .;locus=RLOC_00006033
Chr1	stalkie_big_nohaplotig	exon	15148270	15148944	99	+	.	Parent=comp93206_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15148714	15148827	.	+	0	Parent=comp93206_c0_seq1.mrna1
Chr1	gffcl	locus	15133534	15135822	.	+	.	ID=RLOC_00006034;geneIDs=FBgn0030004.2.path1;transcripts=FBgn0030004.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15133534	15135822	.	+	.	ID=FBgn0030004.2.mrna1;geneID=FBgn0030004.2.path1;Name=FBgn0030004.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2288;mismatches=1;indels=0;unknowns=0;Target=FBgn0030004.2 2289 1 .;locus=RLOC_00006034
Chr1	stalkie_big_nohaplotig	exon	15133534	15135822	99	+	.	Parent=FBgn0030004.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15133534	15135822	.	+	0	Parent=FBgn0030004.2.mrna1
Chr1	gffcl	locus	15143694	15144402	.	-	.	ID=RLOC_00006035;geneIDs=comp119100_c0_seq1.path1;transcripts=comp119100_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15143694	15144402	.	-	.	ID=comp119100_c0_seq1.mrna1;geneID=comp119100_c0_seq1.path1;Name=comp119100_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=707;mismatches=2;indels=0;unknowns=0;Target=comp119100_c0_seq1 709 1 .;CDS_Target=comp119100_c0_seq1 389 294 .;locus=RLOC_00006035
Chr1	stalkie_big_nohaplotig	exon	15143694	15144402	99	-	.	Parent=comp119100_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15144014	15144109	.	-	0	Parent=comp119100_c0_seq1.mrna1
Chr1	gffcl	locus	15145381	15146351	.	-	.	ID=RLOC_00006036;geneIDs=comp144405_c3_seq1.path1;transcripts=comp144405_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15145381	15146351	.	-	.	ID=comp144405_c3_seq1.mrna1;geneID=comp144405_c3_seq1.path1;Name=comp144405_c3_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=970;mismatches=1;indels=0;unknowns=0;Target=comp144405_c3_seq1 971 1 .;CDS_Target=comp144405_c3_seq1 593 453 .;locus=RLOC_00006036
Chr1	stalkie_big_nohaplotig	exon	15145381	15146351	99	-	.	Parent=comp144405_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15145759	15145899	.	-	0	Parent=comp144405_c3_seq1.mrna1
Chr1	gffcl	locus	15146555	15147947	.	-	.	ID=RLOC_00006037;geneIDs=comp144598_c0_seq1.path1;transcripts=comp144598_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15146555	15147947	.	-	.	ID=comp144598_c0_seq1.mrna1;geneID=comp144598_c0_seq1.path1;Name=comp144598_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1391;mismatches=2;indels=0;unknowns=0;Target=comp144598_c0_seq1 1393 1 .;CDS_Target=comp144598_c0_seq1 1228 1094 .;locus=RLOC_00006037
Chr1	stalkie_big_nohaplotig	exon	15146555	15147947	99	-	.	Parent=comp144598_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15146720	15146854	.	-	0	Parent=comp144598_c0_seq1.mrna1
Chr1	gffcl	locus	15151986	15152675	.	-	.	ID=RLOC_00006038;geneIDs=FBgn0030722.6.path1;transcripts=FBgn0030722.6.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15151986	15152675	.	-	.	ID=FBgn0030722.6.mrna1;geneID=FBgn0030722.6.path1;Name=FBgn0030722.6;Dir=indeterminatecoverage=100.0;identity=100.0;matches=690;mismatches=0;indels=0;unknowns=0;Target=FBgn0030722.6 690 1 .;locus=RLOC_00006038
Chr1	stalkie_big_nohaplotig	exon	15151986	15152675	100	-	.	Parent=FBgn0030722.6.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15151986	15152675	.	-	0	Parent=FBgn0030722.6.mrna1
Chr1	gffcl	locus	15159778	15160812	.	-	.	ID=RLOC_00006040;geneIDs=FBgn0036028.1.path1;transcripts=FBgn0036028.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15159778	15160812	.	-	.	ID=FBgn0036028.1.mrna1;geneID=FBgn0036028.1.path1;Name=FBgn0036028.1;Dir=sensecoverage=100.0;identity=100.0;matches=906;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006040
Chr1	stalkie_big_nohaplotig	exon	15159778	15160049	100	-	.	Parent=FBgn0036028.1.mrna1;Target=FBgn0036028.1 635 906 +
Chr1	stalkie_big_nohaplotig	exon	15160118	15160371	100	-	.	Parent=FBgn0036028.1.mrna1;Target=FBgn0036028.1 381 634 +
Chr1	stalkie_big_nohaplotig	exon	15160433	15160812	100	-	.	Parent=FBgn0036028.1.mrna1;Target=FBgn0036028.1 1 380 +
Chr1	stalkie_big_nohaplotig	CDS	15159778	15160049	.	-	2	Parent=FBgn0036028.1.mrna1;Target=FBgn0036028.1 635 906 +
Chr1	stalkie_big_nohaplotig	CDS	15160118	15160371	.	-	1	Parent=FBgn0036028.1.mrna1;Target=FBgn0036028.1 381 634 +
Chr1	stalkie_big_nohaplotig	CDS	15160433	15160812	.	-	0	Parent=FBgn0036028.1.mrna1;Target=FBgn0036028.1 1 380 +
Chr1	gffcl	locus	15163194	15163831	.	+	.	ID=RLOC_00006042;geneIDs=comp149563_c0_seq1.path1;transcripts=comp149563_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15163194	15163831	.	+	.	ID=comp149563_c0_seq1.mrna1;geneID=comp149563_c0_seq1.path1;Name=comp149563_c0_seq1;Dir=indeterminatecoverage=48.8;identity=99.7;matches=636;mismatches=2;indels=0;unknowns=0;Target=comp149563_c0_seq1 1291 654 .;CDS_Target=comp149563_c0_seq1 917 813 .;locus=RLOC_00006042
Chr1	stalkie_big_nohaplotig	exon	15163194	15163831	99	+	.	Parent=comp149563_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15163353	15163457	.	+	0	Parent=comp149563_c0_seq1.mrna1
Chr1	gffcl	locus	15165784	15166904	.	-	.	ID=RLOC_00006043;geneIDs=comp116310_c0_seq1.path1;transcripts=comp116310_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15165784	15166904	.	-	.	ID=comp116310_c0_seq1.mrna1;geneID=comp116310_c0_seq1.path1;Name=comp116310_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.5;matches=1116;mismatches=5;indels=1;unknowns=0;Target=comp116310_c0_seq1 1133 12 .;CDS_Target=comp116310_c0_seq1 179 12 .;locus=RLOC_00006043
Chr1	stalkie_big_nohaplotig	exon	15165784	15166904	99	-	.	Parent=comp116310_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15166737	15166904	.	-	0	Parent=comp116310_c0_seq1.mrna1
Chr1	gffcl	locus	15191617	15192260	.	-	.	ID=RLOC_00006044;geneIDs=comp116248_c0_seq1.path1;transcripts=comp116248_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15191617	15192260	.	-	.	ID=comp116248_c0_seq1.mrna1;geneID=comp116248_c0_seq1.path1;Name=comp116248_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=525;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006044
Chr1	stalkie_big_nohaplotig	exon	15191617	15192007	100	-	.	Parent=comp116248_c0_seq1.mrna1;Target=comp116248_c0_seq1 1 391 -
Chr1	stalkie_big_nohaplotig	exon	15192126	15192260	99	-	.	Parent=comp116248_c0_seq1.mrna1;Target=comp116248_c0_seq1 392 526 -
Chr1	stalkie_big_nohaplotig	CDS	15191831	15192007	.	-	0	Parent=comp116248_c0_seq1.mrna1;Target=comp116248_c0_seq1 215 391 .
Chr1	stalkie_big_nohaplotig	CDS	15192126	15192179	.	-	0	Parent=comp116248_c0_seq1.mrna1;Target=comp116248_c0_seq1 392 445 .
Chr1	stalkie_big_nohaplotig	mRNA	15521156	15529215	.	+	.	ID=FBgn0036007.1.mrna1;geneID=FBgn0036007.1.path1;Name=FBgn0036007.1;Dir=sensecoverage=100.0;identity=100.0;matches=1437;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006046
Chr1	stalkie_big_nohaplotig	exon	15521156	15521188	100	+	.	Parent=FBgn0036007.1.mrna1;Target=FBgn0036007.1 1 33 +
Chr1	stalkie_big_nohaplotig	exon	15521318	15521391	100	+	.	Parent=FBgn0036007.1.mrna1;Target=FBgn0036007.1 34 107 +
Chr1	stalkie_big_nohaplotig	exon	15527209	15527301	100	+	.	Parent=FBgn0036007.1.mrna1;Target=FBgn0036007.1 108 200 +
Chr1	stalkie_big_nohaplotig	exon	15527364	15527514	100	+	.	Parent=FBgn0036007.1.mrna1;Target=FBgn0036007.1 201 351 +
Chr1	stalkie_big_nohaplotig	exon	15527674	15527880	100	+	.	Parent=FBgn0036007.1.mrna1;Target=FBgn0036007.1 352 558 +
Chr1	stalkie_big_nohaplotig	exon	15527944	15528395	100	+	.	Parent=FBgn0036007.1.mrna1;Target=FBgn0036007.1 559 1010 +
Chr1	stalkie_big_nohaplotig	exon	15528459	15528602	100	+	.	Parent=FBgn0036007.1.mrna1;Target=FBgn0036007.1 1011 1154 +
Chr1	stalkie_big_nohaplotig	exon	15528876	15528987	100	+	.	Parent=FBgn0036007.1.mrna1;Target=FBgn0036007.1 1155 1266 +
Chr1	stalkie_big_nohaplotig	exon	15529045	15529215	100	+	.	Parent=FBgn0036007.1.mrna1;Target=FBgn0036007.1 1267 1437 +
Chr1	stalkie_big_nohaplotig	CDS	15521156	15521188	.	+	0	Parent=FBgn0036007.1.mrna1;Target=FBgn0036007.1 1 33 +
Chr1	stalkie_big_nohaplotig	CDS	15521318	15521391	.	+	0	Parent=FBgn0036007.1.mrna1;Target=FBgn0036007.1 34 107 +
Chr1	stalkie_big_nohaplotig	CDS	15527209	15527301	.	+	1	Parent=FBgn0036007.1.mrna1;Target=FBgn0036007.1 108 200 +
Chr1	stalkie_big_nohaplotig	CDS	15527364	15527514	.	+	1	Parent=FBgn0036007.1.mrna1;Target=FBgn0036007.1 201 351 +
Chr1	stalkie_big_nohaplotig	CDS	15527674	15527880	.	+	0	Parent=FBgn0036007.1.mrna1;Target=FBgn0036007.1 352 558 +
Chr1	stalkie_big_nohaplotig	CDS	15527944	15528395	.	+	0	Parent=FBgn0036007.1.mrna1;Target=FBgn0036007.1 559 1010 +
Chr1	stalkie_big_nohaplotig	CDS	15528459	15528602	.	+	1	Parent=FBgn0036007.1.mrna1;Target=FBgn0036007.1 1011 1154 +
Chr1	stalkie_big_nohaplotig	CDS	15528876	15528987	.	+	1	Parent=FBgn0036007.1.mrna1;Target=FBgn0036007.1 1155 1266 +
Chr1	stalkie_big_nohaplotig	CDS	15529045	15529215	.	+	0	Parent=FBgn0036007.1.mrna1;Target=FBgn0036007.1 1267 1437 +
Chr1	stalkie_big_nohaplotig	mRNA	15521372	15522633	.	+	.	ID=comp117486_c0_seq1.mrna1;geneID=comp117486_c0_seq1.path1;Name=comp117486_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=703;mismatches=0;indels=1;unknowns=0;Target=comp117486_c0_seq1 85 2 .;locus=RLOC_00006046
Chr1	stalkie_big_nohaplotig	exon	15521372	15521967	99	+	.	Parent=comp117486_c0_seq1.mrna1;Target=comp117486_c0_seq1 597 1 .
Chr1	stalkie_big_nohaplotig	exon	15522527	15522633	100	+	.	Parent=comp117486_c0_seq1.mrna1;Target=comp117486_c0_seq1 704 598 .
Chr1	stalkie_big_nohaplotig	CDS	15521373	15521456	.	+	0	Parent=comp117486_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15543102	15549787	.	+	.	ID=FBgn0035348.1.mrna1;geneID=FBgn0035348.1.path1;Name=FBgn0035348.1;Dir=sensecoverage=100.0;identity=100.0;matches=1113;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006046
Chr1	stalkie_big_nohaplotig	exon	15543102	15543274	100	+	.	Parent=FBgn0035348.1.mrna1;Target=FBgn0035348.1 1 173 +
Chr1	stalkie_big_nohaplotig	exon	15544708	15544779	100	+	.	Parent=FBgn0035348.1.mrna1;Target=FBgn0035348.1 174 245 +
Chr1	stalkie_big_nohaplotig	exon	15548920	15549787	100	+	.	Parent=FBgn0035348.1.mrna1;Target=FBgn0035348.1 246 1113 +
Chr1	stalkie_big_nohaplotig	CDS	15543102	15543274	.	+	0	Parent=FBgn0035348.1.mrna1;Target=FBgn0035348.1 1 173 +
Chr1	stalkie_big_nohaplotig	CDS	15544708	15544779	.	+	1	Parent=FBgn0035348.1.mrna1;Target=FBgn0035348.1 174 245 +
Chr1	stalkie_big_nohaplotig	CDS	15548920	15549787	.	+	1	Parent=FBgn0035348.1.mrna1;Target=FBgn0035348.1 246 1113 +
Chr1	stalkie_big_nohaplotig	mRNA	15544756	15547012	.	+	.	ID=comp147210_c0_seq1.mrna1;geneID=comp147210_c0_seq1.path1;Name=comp147210_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=1449;mismatches=0;indels=0;unknowns=0;Target=comp147210_c0_seq1 1008 1169 +;locus=RLOC_00006046
Chr1	stalkie_big_nohaplotig	exon	15544756	15544779	100	+	.	Parent=comp147210_c0_seq1.mrna1;Target=comp147210_c0_seq1 1 24 +
Chr1	stalkie_big_nohaplotig	exon	15545588	15547012	100	+	.	Parent=comp147210_c0_seq1.mrna1;Target=comp147210_c0_seq1 25 1449 +
Chr1	stalkie_big_nohaplotig	CDS	15546571	15546732	.	+	0	Parent=comp147210_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15544757	15545611	.	-	.	ID=comp135683_c0_seq1.mrna1;geneID=comp135683_c0_seq1.path1;Name=comp135683_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=855;mismatches=0;indels=0;unknowns=0;Target=comp135683_c0_seq1 855 1 .;CDS_Target=comp135683_c0_seq1 815 486 .;locus=RLOC_00006046
Chr1	stalkie_big_nohaplotig	exon	15544757	15545611	100	-	.	Parent=comp135683_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15544797	15545126	.	-	0	Parent=comp135683_c0_seq1.mrna1
Chr1	gffcl	locus	15258145	15259204	.	+	.	ID=RLOC_00006047;geneIDs=comp68829_c0_seq1.path1;transcripts=comp68829_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15258145	15259204	.	+	.	ID=comp68829_c0_seq1.mrna1;geneID=comp68829_c0_seq1.path1;Name=comp68829_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1060;mismatches=0;indels=0;unknowns=0;Target=comp68829_c0_seq1 1060 1 .;CDS_Target=comp68829_c0_seq1 172 83 .;locus=RLOC_00006047
Chr1	stalkie_big_nohaplotig	exon	15258145	15259204	100	+	.	Parent=comp68829_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15258227	15258316	.	+	0	Parent=comp68829_c0_seq1.mrna1
Chr1	gffcl	locus	15259680	15261176	.	-	.	ID=RLOC_00006048;geneIDs=FBgn0036020.1.path1;transcripts=FBgn0036020.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15259680	15261176	.	-	.	ID=FBgn0036020.1.mrna1;geneID=FBgn0036020.1.path1;Name=FBgn0036020.1;Dir=sensecoverage=100.0;identity=100.0;matches=1194;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006048
Chr1	stalkie_big_nohaplotig	exon	15259680	15259901	100	-	.	Parent=FBgn0036020.1.mrna1;Target=FBgn0036020.1 973 1194 +
Chr1	stalkie_big_nohaplotig	exon	15259966	15260244	100	-	.	Parent=FBgn0036020.1.mrna1;Target=FBgn0036020.1 694 972 +
Chr1	stalkie_big_nohaplotig	exon	15260310	15260438	100	-	.	Parent=FBgn0036020.1.mrna1;Target=FBgn0036020.1 565 693 +
Chr1	stalkie_big_nohaplotig	exon	15260498	15260686	100	-	.	Parent=FBgn0036020.1.mrna1;Target=FBgn0036020.1 376 564 +
Chr1	stalkie_big_nohaplotig	exon	15260747	15260991	100	-	.	Parent=FBgn0036020.1.mrna1;Target=FBgn0036020.1 131 375 +
Chr1	stalkie_big_nohaplotig	exon	15261047	15261176	100	-	.	Parent=FBgn0036020.1.mrna1;Target=FBgn0036020.1 1 130 +
Chr1	stalkie_big_nohaplotig	CDS	15259680	15259901	.	-	0	Parent=FBgn0036020.1.mrna1;Target=FBgn0036020.1 973 1194 +
Chr1	stalkie_big_nohaplotig	CDS	15259966	15260244	.	-	0	Parent=FBgn0036020.1.mrna1;Target=FBgn0036020.1 694 972 +
Chr1	stalkie_big_nohaplotig	CDS	15260310	15260438	.	-	0	Parent=FBgn0036020.1.mrna1;Target=FBgn0036020.1 565 693 +
Chr1	stalkie_big_nohaplotig	CDS	15260498	15260686	.	-	0	Parent=FBgn0036020.1.mrna1;Target=FBgn0036020.1 376 564 +
Chr1	stalkie_big_nohaplotig	CDS	15260747	15260991	.	-	2	Parent=FBgn0036020.1.mrna1;Target=FBgn0036020.1 131 375 +
Chr1	stalkie_big_nohaplotig	CDS	15261047	15261176	.	-	0	Parent=FBgn0036020.1.mrna1;Target=FBgn0036020.1 1 130 +
Chr1	gffcl	locus	15305589	15306580	.	-	.	ID=RLOC_00006049;geneIDs=comp153317_c1_seq1.path1;transcripts=comp153317_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15305589	15306580	.	-	.	ID=comp153317_c1_seq1.mrna1;geneID=comp153317_c1_seq1.path1;Name=comp153317_c1_seq1;Dir=indeterminatecoverage=99.0;identity=99.2;matches=986;mismatches=6;indels=2;unknowns=0;Target=comp153317_c1_seq1 996 3 .;CDS_Target=comp153317_c1_seq1 533 402 .;locus=RLOC_00006049
Chr1	stalkie_big_nohaplotig	exon	15305589	15306580	99	-	.	Parent=comp153317_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15306052	15306183	.	-	0	Parent=comp153317_c1_seq1.mrna1
Chr1	gffcl	locus	15309004	15470141	.	-	.	ID=RLOC_00006050;geneIDs=FBgn0261555.1.path1,comp155329_c2_seq1.path1;transcripts=FBgn0261555.1.mrna1,comp155329_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15309004	15470141	.	-	.	ID=FBgn0261555.1.mrna1;geneID=FBgn0261555.1.path1;Name=FBgn0261555.1;Dir=sensecoverage=100.0;identity=100.0;matches=1317;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006050
Chr1	stalkie_big_nohaplotig	exon	15309004	15309267	100	-	.	Parent=FBgn0261555.1.mrna1;Target=FBgn0261555.1 1054 1317 +
Chr1	stalkie_big_nohaplotig	exon	15317010	15317132	100	-	.	Parent=FBgn0261555.1.mrna1;Target=FBgn0261555.1 931 1053 +
Chr1	stalkie_big_nohaplotig	exon	15317245	15317412	100	-	.	Parent=FBgn0261555.1.mrna1;Target=FBgn0261555.1 763 930 +
Chr1	stalkie_big_nohaplotig	exon	15322428	15322531	100	-	.	Parent=FBgn0261555.1.mrna1;Target=FBgn0261555.1 659 762 +
Chr1	stalkie_big_nohaplotig	exon	15325304	15325481	100	-	.	Parent=FBgn0261555.1.mrna1;Target=FBgn0261555.1 481 658 +
Chr1	stalkie_big_nohaplotig	exon	15344882	15345049	100	-	.	Parent=FBgn0261555.1.mrna1;Target=FBgn0261555.1 313 480 +
Chr1	stalkie_big_nohaplotig	exon	15345129	15345224	100	-	.	Parent=FBgn0261555.1.mrna1;Target=FBgn0261555.1 217 312 +
Chr1	stalkie_big_nohaplotig	exon	15356515	15356586	100	-	.	Parent=FBgn0261555.1.mrna1;Target=FBgn0261555.1 145 216 +
Chr1	stalkie_big_nohaplotig	exon	15469998	15470141	100	-	.	Parent=FBgn0261555.1.mrna1;Target=FBgn0261555.1 1 144 +
Chr1	stalkie_big_nohaplotig	CDS	15309004	15309267	.	-	0	Parent=FBgn0261555.1.mrna1;Target=FBgn0261555.1 1054 1317 +
Chr1	stalkie_big_nohaplotig	CDS	15317010	15317132	.	-	0	Parent=FBgn0261555.1.mrna1;Target=FBgn0261555.1 931 1053 +
Chr1	stalkie_big_nohaplotig	CDS	15317245	15317412	.	-	0	Parent=FBgn0261555.1.mrna1;Target=FBgn0261555.1 763 930 +
Chr1	stalkie_big_nohaplotig	CDS	15322428	15322531	.	-	2	Parent=FBgn0261555.1.mrna1;Target=FBgn0261555.1 659 762 +
Chr1	stalkie_big_nohaplotig	CDS	15325304	15325481	.	-	0	Parent=FBgn0261555.1.mrna1;Target=FBgn0261555.1 481 658 +
Chr1	stalkie_big_nohaplotig	CDS	15344882	15345049	.	-	0	Parent=FBgn0261555.1.mrna1;Target=FBgn0261555.1 313 480 +
Chr1	stalkie_big_nohaplotig	CDS	15345129	15345224	.	-	0	Parent=FBgn0261555.1.mrna1;Target=FBgn0261555.1 217 312 +
Chr1	stalkie_big_nohaplotig	CDS	15356515	15356586	.	-	0	Parent=FBgn0261555.1.mrna1;Target=FBgn0261555.1 145 216 +
Chr1	stalkie_big_nohaplotig	CDS	15469998	15470141	.	-	0	Parent=FBgn0261555.1.mrna1;Target=FBgn0261555.1 1 144 +
Chr1	stalkie_big_nohaplotig	mRNA	15314627	15341099	.	-	.	ID=comp155329_c2_seq1.mrna1;geneID=comp155329_c2_seq1.path1;Name=comp155329_c2_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=4885;mismatches=1;indels=2;unknowns=0;Target=comp155329_c2_seq1 1279 1563 +;locus=RLOC_00006050
Chr1	stalkie_big_nohaplotig	exon	15314627	15315951	99	-	.	Parent=comp155329_c2_seq1.mrna1;Target=comp155329_c2_seq1 3564 4888 +
Chr1	stalkie_big_nohaplotig	exon	15317010	15317132	100	-	.	Parent=comp155329_c2_seq1.mrna1;Target=comp155329_c2_seq1 3441 3563 +
Chr1	stalkie_big_nohaplotig	exon	15317245	15317412	100	-	.	Parent=comp155329_c2_seq1.mrna1;Target=comp155329_c2_seq1 3273 3440 +
Chr1	stalkie_big_nohaplotig	exon	15322428	15322531	100	-	.	Parent=comp155329_c2_seq1.mrna1;Target=comp155329_c2_seq1 3169 3272 +
Chr1	stalkie_big_nohaplotig	exon	15325304	15325481	100	-	.	Parent=comp155329_c2_seq1.mrna1;Target=comp155329_c2_seq1 2991 3168 +
Chr1	stalkie_big_nohaplotig	exon	15325733	15328087	99	-	.	Parent=comp155329_c2_seq1.mrna1;Target=comp155329_c2_seq1 634 2990 +
Chr1	stalkie_big_nohaplotig	exon	15340324	15340748	100	-	.	Parent=comp155329_c2_seq1.mrna1;Target=comp155329_c2_seq1 209 633 +
Chr1	stalkie_big_nohaplotig	exon	15340892	15341099	100	-	.	Parent=comp155329_c2_seq1.mrna1;Target=comp155329_c2_seq1 1 208 +
Chr1	stalkie_big_nohaplotig	CDS	15327159	15327442	.	-	0	Parent=comp155329_c2_seq1.mrna1
Chr1	gffcl	locus	15311658	15313072	.	+	.	ID=RLOC_00006051;geneIDs=comp134683_c0_seq1.path1;transcripts=comp134683_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15311658	15313072	.	+	.	ID=comp134683_c0_seq1.mrna1;geneID=comp134683_c0_seq1.path1;Name=comp134683_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1413;mismatches=2;indels=0;unknowns=0;Target=comp134683_c0_seq1 1415 1 .;CDS_Target=comp134683_c0_seq1 145 2 .;locus=RLOC_00006051
Chr1	stalkie_big_nohaplotig	exon	15311658	15313072	99	+	.	Parent=comp134683_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15311659	15311802	.	+	0	Parent=comp134683_c0_seq1.mrna1
Chr1	gffcl	locus	15461142	15462801	.	+	.	ID=RLOC_00006052;geneIDs=comp152087_c0_seq1.path1;transcripts=comp152087_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15461142	15462801	.	+	.	ID=comp152087_c0_seq1.mrna1;geneID=comp152087_c0_seq1.path1;Name=comp152087_c0_seq1;Dir=sensecoverage=99.9;identity=99.6;matches=1391;mismatches=5;indels=1;unknowns=0;Target=comp152087_c0_seq1 1259 1369 +;locus=RLOC_00006052
Chr1	stalkie_big_nohaplotig	exon	15461142	15461162	100	+	.	Parent=comp152087_c0_seq1.mrna1;Target=comp152087_c0_seq1 2 22 +
Chr1	stalkie_big_nohaplotig	exon	15461427	15462801	99	+	.	Parent=comp152087_c0_seq1.mrna1;Target=comp152087_c0_seq1 23 1398 +
Chr1	stalkie_big_nohaplotig	CDS	15462662	15462772	.	+	0	Parent=comp152087_c0_seq1.mrna1
Chr1	gffcl	locus	15491038	15496508	.	+	.	ID=RLOC_00006053;geneIDs=FBgn0036008.1.path1;transcripts=FBgn0036008.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15491038	15496508	.	+	.	ID=FBgn0036008.1.mrna1;geneID=FBgn0036008.1.path1;Name=FBgn0036008.1;Dir=sensecoverage=100.0;identity=99.7;matches=969;mismatches=3;indels=0;unknowns=0;locus=RLOC_00006053
Chr1	stalkie_big_nohaplotig	exon	15491038	15491154	100	+	.	Parent=FBgn0036008.1.mrna1;Target=FBgn0036008.1 1 117 +
Chr1	stalkie_big_nohaplotig	exon	15491457	15491516	100	+	.	Parent=FBgn0036008.1.mrna1;Target=FBgn0036008.1 118 177 +
Chr1	stalkie_big_nohaplotig	exon	15493748	15494014	100	+	.	Parent=FBgn0036008.1.mrna1;Target=FBgn0036008.1 178 444 +
Chr1	stalkie_big_nohaplotig	exon	15495981	15496508	99	+	.	Parent=FBgn0036008.1.mrna1;Target=FBgn0036008.1 445 972 +
Chr1	stalkie_big_nohaplotig	CDS	15491038	15491154	.	+	0	Parent=FBgn0036008.1.mrna1;Target=FBgn0036008.1 1 117 +
Chr1	stalkie_big_nohaplotig	CDS	15491457	15491516	.	+	0	Parent=FBgn0036008.1.mrna1;Target=FBgn0036008.1 118 177 +
Chr1	stalkie_big_nohaplotig	CDS	15493748	15494014	.	+	0	Parent=FBgn0036008.1.mrna1;Target=FBgn0036008.1 178 444 +
Chr1	stalkie_big_nohaplotig	CDS	15495981	15496508	.	+	0	Parent=FBgn0036008.1.mrna1;Target=FBgn0036008.1 445 972 +
Chr1	gffcl	locus	15502005	15504200	.	+	.	ID=RLOC_00006054;geneIDs=FBgn0036169.1.path1;transcripts=FBgn0036169.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15502005	15504200	.	+	.	ID=FBgn0036169.1.mrna1;geneID=FBgn0036169.1.path1;Name=FBgn0036169.1;Dir=sensecoverage=100.0;identity=99.9;matches=1493;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006054
Chr1	stalkie_big_nohaplotig	exon	15502005	15502254	100	+	.	Parent=FBgn0036169.1.mrna1;Target=FBgn0036169.1 1 250 +
Chr1	stalkie_big_nohaplotig	exon	15502309	15502450	100	+	.	Parent=FBgn0036169.1.mrna1;Target=FBgn0036169.1 251 392 +
Chr1	stalkie_big_nohaplotig	exon	15502762	15502868	99	+	.	Parent=FBgn0036169.1.mrna1;Target=FBgn0036169.1 393 499 +
Chr1	stalkie_big_nohaplotig	exon	15502939	15503188	100	+	.	Parent=FBgn0036169.1.mrna1;Target=FBgn0036169.1 500 749 +
Chr1	stalkie_big_nohaplotig	exon	15503335	15503561	100	+	.	Parent=FBgn0036169.1.mrna1;Target=FBgn0036169.1 750 976 +
Chr1	stalkie_big_nohaplotig	exon	15503627	15504039	100	+	.	Parent=FBgn0036169.1.mrna1;Target=FBgn0036169.1 977 1389 +
Chr1	stalkie_big_nohaplotig	exon	15504096	15504200	100	+	.	Parent=FBgn0036169.1.mrna1;Target=FBgn0036169.1 1390 1494 +
Chr1	stalkie_big_nohaplotig	CDS	15502005	15502254	.	+	0	Parent=FBgn0036169.1.mrna1;Target=FBgn0036169.1 1 250 +
Chr1	stalkie_big_nohaplotig	CDS	15502309	15502450	.	+	2	Parent=FBgn0036169.1.mrna1;Target=FBgn0036169.1 251 392 +
Chr1	stalkie_big_nohaplotig	CDS	15502762	15502868	.	+	1	Parent=FBgn0036169.1.mrna1;Target=FBgn0036169.1 393 499 +
Chr1	stalkie_big_nohaplotig	CDS	15502939	15503188	.	+	2	Parent=FBgn0036169.1.mrna1;Target=FBgn0036169.1 500 749 +
Chr1	stalkie_big_nohaplotig	CDS	15503335	15503561	.	+	1	Parent=FBgn0036169.1.mrna1;Target=FBgn0036169.1 750 976 +
Chr1	stalkie_big_nohaplotig	CDS	15503627	15504039	.	+	2	Parent=FBgn0036169.1.mrna1;Target=FBgn0036169.1 977 1389 +
Chr1	stalkie_big_nohaplotig	CDS	15504096	15504200	.	+	0	Parent=FBgn0036169.1.mrna1;Target=FBgn0036169.1 1390 1494 +
Chr1	gffcl	locus	15524592	15525098	.	-	.	ID=RLOC_00006055;geneIDs=comp751844_c0_seq1.path1;transcripts=comp751844_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15524592	15525098	.	-	.	ID=comp751844_c0_seq1.mrna1;geneID=comp751844_c0_seq1.path1;Name=comp751844_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=507;mismatches=0;indels=0;unknowns=0;Target=comp751844_c0_seq1 507 1 .;CDS_Target=comp751844_c0_seq1 66 1 .;locus=RLOC_00006055
Chr1	stalkie_big_nohaplotig	exon	15524592	15525098	100	-	.	Parent=comp751844_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15525033	15525098	.	-	0	Parent=comp751844_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15556978	15595018	.	-	.	ID=FBgn0035347.1.mrna1;geneID=FBgn0035347.1.path1;Name=FBgn0035347.1;Dir=sensecoverage=99.9;identity=100.0;matches=6356;mismatches=0;indels=1;unknowns=0;locus=RLOC_00006056
Chr1	stalkie_big_nohaplotig	exon	15556978	15557114	99	-	.	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 6229 6366 +
Chr1	stalkie_big_nohaplotig	exon	15557175	15557302	100	-	.	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 6101 6228 +
Chr1	stalkie_big_nohaplotig	exon	15557684	15557800	100	-	.	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 5984 6100 +
Chr1	stalkie_big_nohaplotig	exon	15557879	15559885	100	-	.	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 3977 5983 +
Chr1	stalkie_big_nohaplotig	exon	15559950	15560107	100	-	.	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 3819 3976 +
Chr1	stalkie_big_nohaplotig	exon	15560216	15560702	100	-	.	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 3332 3818 +
Chr1	stalkie_big_nohaplotig	exon	15560754	15560895	100	-	.	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 3190 3331 +
Chr1	stalkie_big_nohaplotig	exon	15573985	15574119	100	-	.	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 3055 3189 +
Chr1	stalkie_big_nohaplotig	exon	15574183	15574486	100	-	.	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 2751 3054 +
Chr1	stalkie_big_nohaplotig	exon	15583234	15583558	100	-	.	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 2426 2750 +
Chr1	stalkie_big_nohaplotig	exon	15585949	15586053	100	-	.	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 2321 2425 +
Chr1	stalkie_big_nohaplotig	exon	15586442	15586878	100	-	.	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 1884 2320 +
Chr1	stalkie_big_nohaplotig	exon	15592953	15594441	100	-	.	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 395 1883 +
Chr1	stalkie_big_nohaplotig	exon	15594548	15594632	100	-	.	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 310 394 +
Chr1	stalkie_big_nohaplotig	exon	15594719	15595018	100	-	.	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 10 309 +
Chr1	stalkie_big_nohaplotig	CDS	15556978	15557114	.	-	0	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 6229 6366 +
Chr1	stalkie_big_nohaplotig	CDS	15557175	15557302	.	-	2	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 6101 6228 +
Chr1	stalkie_big_nohaplotig	CDS	15557684	15557800	.	-	2	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 5984 6100 +
Chr1	stalkie_big_nohaplotig	CDS	15557879	15559885	.	-	2	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 3977 5983 +
Chr1	stalkie_big_nohaplotig	CDS	15559950	15560107	.	-	1	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 3819 3976 +
Chr1	stalkie_big_nohaplotig	CDS	15560216	15560702	.	-	2	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 3332 3818 +
Chr1	stalkie_big_nohaplotig	CDS	15560754	15560895	.	-	0	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 3190 3331 +
Chr1	stalkie_big_nohaplotig	CDS	15573985	15574119	.	-	0	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 3055 3189 +
Chr1	stalkie_big_nohaplotig	CDS	15574183	15574486	.	-	1	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 2751 3054 +
Chr1	stalkie_big_nohaplotig	CDS	15583234	15583558	.	-	2	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 2426 2750 +
Chr1	stalkie_big_nohaplotig	CDS	15585949	15586053	.	-	2	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 2321 2425 +
Chr1	stalkie_big_nohaplotig	CDS	15586442	15586878	.	-	1	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 1884 2320 +
Chr1	stalkie_big_nohaplotig	CDS	15592953	15594441	.	-	2	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 395 1883 +
Chr1	stalkie_big_nohaplotig	CDS	15594548	15594632	.	-	0	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 310 394 +
Chr1	stalkie_big_nohaplotig	CDS	15594719	15595018	.	-	0	Parent=FBgn0035347.1.mrna1;Target=FBgn0035347.1 10 309 +
Chr1	stalkie_big_nohaplotig	mRNA	15583796	15620049	.	-	.	ID=comp158607_c0_seq1.mrna1;geneID=comp158607_c0_seq1.path1;Name=comp158607_c0_seq1;Dir=antisensecoverage=63.8;identity=100.0;matches=5602;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006056
Chr1	stalkie_big_nohaplotig	exon	15583796	15585449	100	-	.	Parent=comp158607_c0_seq1.mrna1;Target=comp158607_c0_seq1 3183 4836 -
Chr1	stalkie_big_nohaplotig	exon	15585949	15586053	100	-	.	Parent=comp158607_c0_seq1.mrna1;Target=comp158607_c0_seq1 4837 4941 -
Chr1	stalkie_big_nohaplotig	exon	15586442	15586878	100	-	.	Parent=comp158607_c0_seq1.mrna1;Target=comp158607_c0_seq1 4942 5378 -
Chr1	stalkie_big_nohaplotig	exon	15592953	15594441	100	-	.	Parent=comp158607_c0_seq1.mrna1;Target=comp158607_c0_seq1 5379 6867 -
Chr1	stalkie_big_nohaplotig	exon	15594548	15594632	100	-	.	Parent=comp158607_c0_seq1.mrna1;Target=comp158607_c0_seq1 6868 6952 -
Chr1	stalkie_big_nohaplotig	exon	15594719	15595017	100	-	.	Parent=comp158607_c0_seq1.mrna1;Target=comp158607_c0_seq1 6953 7251 -
Chr1	stalkie_big_nohaplotig	exon	15609969	15611223	100	-	.	Parent=comp158607_c0_seq1.mrna1;Target=comp158607_c0_seq1 7252 8506 -
Chr1	stalkie_big_nohaplotig	exon	15619772	15620049	100	-	.	Parent=comp158607_c0_seq1.mrna1;Target=comp158607_c0_seq1 8507 8784 -
Chr1	stalkie_big_nohaplotig	CDS	15584056	15585449	.	-	2	Parent=comp158607_c0_seq1.mrna1;Target=comp158607_c0_seq1 3443 4836 .
Chr1	stalkie_big_nohaplotig	CDS	15585949	15586053	.	-	2	Parent=comp158607_c0_seq1.mrna1;Target=comp158607_c0_seq1 4837 4941 .
Chr1	stalkie_big_nohaplotig	CDS	15586442	15586878	.	-	1	Parent=comp158607_c0_seq1.mrna1;Target=comp158607_c0_seq1 4942 5378 .
Chr1	stalkie_big_nohaplotig	CDS	15592953	15594441	.	-	2	Parent=comp158607_c0_seq1.mrna1;Target=comp158607_c0_seq1 5379 6867 .
Chr1	stalkie_big_nohaplotig	CDS	15594548	15594632	.	-	0	Parent=comp158607_c0_seq1.mrna1;Target=comp158607_c0_seq1 6868 6952 .
Chr1	stalkie_big_nohaplotig	CDS	15594719	15594868	.	-	0	Parent=comp158607_c0_seq1.mrna1;Target=comp158607_c0_seq1 6953 7102 .
Chr1	gffcl	locus	15562018	15563570	.	+	.	ID=RLOC_00006057;geneIDs=comp134093_c0_seq1.path1;transcripts=comp134093_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15562018	15563570	.	+	.	ID=comp134093_c0_seq1.mrna1;geneID=comp134093_c0_seq1.path1;Name=comp134093_c0_seq1;Dir=indeterminatecoverage=98.5;identity=99.9;matches=1553;mismatches=0;indels=1;unknowns=0;Target=comp134093_c0_seq1 1554 1 .;CDS_Target=comp134093_c0_seq1 831 649 .;locus=RLOC_00006057
Chr1	stalkie_big_nohaplotig	exon	15562018	15563570	99	+	.	Parent=comp134093_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15562665	15562847	.	+	0	Parent=comp134093_c0_seq1.mrna1
Chr1	gffcl	locus	15576110	15576919	.	+	.	ID=RLOC_00006058;geneIDs=ORF3169.path1;transcripts=ORF3169.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15576110	15576919	.	+	.	ID=ORF3169.mrna1;geneID=ORF3169.path1;Name=ORF3169;Dir=indeterminatecoverage=100.0;identity=100.0;matches=762;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006058
Chr1	stalkie_big_nohaplotig	exon	15576110	15576556	100	+	.	Parent=ORF3169.mrna1;Target=ORF3169 447 1 .
Chr1	stalkie_big_nohaplotig	exon	15576605	15576919	100	+	.	Parent=ORF3169.mrna1;Target=ORF3169 762 448 .
Chr1	stalkie_big_nohaplotig	CDS	15576110	15576556	.	+	0	Parent=ORF3169.mrna1;Target=ORF3169 447 1 .
Chr1	stalkie_big_nohaplotig	CDS	15576605	15576919	.	+	0	Parent=ORF3169.mrna1;Target=ORF3169 762 448 .
Chr1	gffcl	locus	15578266	15579432	.	+	.	ID=RLOC_00006059;geneIDs=comp149685_c0_seq1.path1;transcripts=comp149685_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15578266	15579432	.	+	.	ID=comp149685_c0_seq1.mrna1;geneID=comp149685_c0_seq1.path1;Name=comp149685_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1166;mismatches=1;indels=0;unknowns=0;Target=comp149685_c0_seq1 1167 1 .;CDS_Target=comp149685_c0_seq1 950 774 .;locus=RLOC_00006059
Chr1	stalkie_big_nohaplotig	exon	15578266	15579432	99	+	.	Parent=comp149685_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15579039	15579215	.	+	0	Parent=comp149685_c0_seq1.mrna1
Chr1	gffcl	locus	15580446	15581842	.	-	.	ID=RLOC_00006060;geneIDs=comp117755_c0_seq1.path1;transcripts=comp117755_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15580446	15581842	.	-	.	ID=comp117755_c0_seq1.mrna1;geneID=comp117755_c0_seq1.path1;Name=comp117755_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1396;mismatches=1;indels=0;unknowns=0;Target=comp117755_c0_seq1 1397 1 .;CDS_Target=comp117755_c0_seq1 1238 1128 .;locus=RLOC_00006060
Chr1	stalkie_big_nohaplotig	exon	15580446	15581842	99	-	.	Parent=comp117755_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15580605	15580715	.	-	0	Parent=comp117755_c0_seq1.mrna1
Chr1	gffcl	locus	15611438	15612505	.	-	.	ID=RLOC_00006061;geneIDs=comp145388_c0_seq1.path1;transcripts=comp145388_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15611438	15612505	.	-	.	ID=comp145388_c0_seq1.mrna1;geneID=comp145388_c0_seq1.path1;Name=comp145388_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1065;mismatches=3;indels=0;unknowns=0;Target=comp145388_c0_seq1 1068 1 .;CDS_Target=comp145388_c0_seq1 40 2 .;locus=RLOC_00006061
Chr1	stalkie_big_nohaplotig	exon	15611438	15612505	99	-	.	Parent=comp145388_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15612466	15612504	.	-	0	Parent=comp145388_c0_seq1.mrna1
Chr1	gffcl	locus	15622241	15623845	.	+	.	ID=RLOC_00006062;geneIDs=FBgn0037162.1.path1;transcripts=FBgn0037162.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15622241	15623845	.	+	.	ID=FBgn0037162.1.mrna1;geneID=FBgn0037162.1.path1;Name=FBgn0037162.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1604;mismatches=1;indels=0;unknowns=0;Target=FBgn0037162.1 1605 1 .;locus=RLOC_00006062
Chr1	stalkie_big_nohaplotig	exon	15622241	15623845	99	+	.	Parent=FBgn0037162.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15622241	15623845	.	+	0	Parent=FBgn0037162.1.mrna1
Chr1	gffcl	locus	15645134	15652210	.	-	.	ID=RLOC_00006063;geneIDs=FBgn0263608.1.path1;transcripts=FBgn0263608.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15645134	15652210	.	-	.	ID=FBgn0263608.1.mrna1;geneID=FBgn0263608.1.path1;Name=FBgn0263608.1;Dir=sensecoverage=100.0;identity=99.9;matches=926;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006063
Chr1	stalkie_big_nohaplotig	exon	15645134	15645410	100	-	.	Parent=FBgn0263608.1.mrna1;Target=FBgn0263608.1 651 927 +
Chr1	stalkie_big_nohaplotig	exon	15645555	15645652	100	-	.	Parent=FBgn0263608.1.mrna1;Target=FBgn0263608.1 553 650 +
Chr1	stalkie_big_nohaplotig	exon	15646528	15646634	99	-	.	Parent=FBgn0263608.1.mrna1;Target=FBgn0263608.1 446 552 +
Chr1	stalkie_big_nohaplotig	exon	15647631	15647866	100	-	.	Parent=FBgn0263608.1.mrna1;Target=FBgn0263608.1 210 445 +
Chr1	stalkie_big_nohaplotig	exon	15647987	15648037	100	-	.	Parent=FBgn0263608.1.mrna1;Target=FBgn0263608.1 159 209 +
Chr1	stalkie_big_nohaplotig	exon	15652053	15652210	100	-	.	Parent=FBgn0263608.1.mrna1;Target=FBgn0263608.1 1 158 +
Chr1	stalkie_big_nohaplotig	CDS	15645134	15645410	.	-	1	Parent=FBgn0263608.1.mrna1;Target=FBgn0263608.1 651 927 +
Chr1	stalkie_big_nohaplotig	CDS	15645555	15645652	.	-	0	Parent=FBgn0263608.1.mrna1;Target=FBgn0263608.1 553 650 +
Chr1	stalkie_big_nohaplotig	CDS	15646528	15646634	.	-	2	Parent=FBgn0263608.1.mrna1;Target=FBgn0263608.1 446 552 +
Chr1	stalkie_big_nohaplotig	CDS	15647631	15647866	.	-	1	Parent=FBgn0263608.1.mrna1;Target=FBgn0263608.1 210 445 +
Chr1	stalkie_big_nohaplotig	CDS	15647987	15648037	.	-	1	Parent=FBgn0263608.1.mrna1;Target=FBgn0263608.1 159 209 +
Chr1	stalkie_big_nohaplotig	CDS	15652053	15652210	.	-	0	Parent=FBgn0263608.1.mrna1;Target=FBgn0263608.1 1 158 +
Chr1	gffcl	locus	15656718	15670970	.	-	.	ID=RLOC_00006064;geneIDs=FBgn0263607.1.path1;transcripts=FBgn0263607.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15656718	15670970	.	-	.	ID=FBgn0263607.1.mrna1;geneID=FBgn0263607.1.path1;Name=FBgn0263607.1;Dir=sensecoverage=100.0;identity=99.5;matches=1110;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006064
Chr1	stalkie_big_nohaplotig	exon	15656718	15657048	99	-	.	Parent=FBgn0263607.1.mrna1;Target=FBgn0263607.1 786 1116 +
Chr1	stalkie_big_nohaplotig	exon	15657128	15657225	100	-	.	Parent=FBgn0263607.1.mrna1;Target=FBgn0263607.1 688 785 +
Chr1	stalkie_big_nohaplotig	exon	15657579	15657685	100	-	.	Parent=FBgn0263607.1.mrna1;Target=FBgn0263607.1 581 687 +
Chr1	stalkie_big_nohaplotig	exon	15659162	15659391	99	-	.	Parent=FBgn0263607.1.mrna1;Target=FBgn0263607.1 351 580 +
Chr1	stalkie_big_nohaplotig	exon	15659452	15659502	100	-	.	Parent=FBgn0263607.1.mrna1;Target=FBgn0263607.1 300 350 +
Chr1	stalkie_big_nohaplotig	exon	15670672	15670970	98	-	.	Parent=FBgn0263607.1.mrna1;Target=FBgn0263607.1 1 299 +
Chr1	stalkie_big_nohaplotig	CDS	15656718	15657048	.	-	1	Parent=FBgn0263607.1.mrna1;Target=FBgn0263607.1 786 1116 +
Chr1	stalkie_big_nohaplotig	CDS	15657128	15657225	.	-	0	Parent=FBgn0263607.1.mrna1;Target=FBgn0263607.1 688 785 +
Chr1	stalkie_big_nohaplotig	CDS	15657579	15657685	.	-	2	Parent=FBgn0263607.1.mrna1;Target=FBgn0263607.1 581 687 +
Chr1	stalkie_big_nohaplotig	CDS	15659162	15659391	.	-	1	Parent=FBgn0263607.1.mrna1;Target=FBgn0263607.1 351 580 +
Chr1	stalkie_big_nohaplotig	CDS	15659452	15659502	.	-	1	Parent=FBgn0263607.1.mrna1;Target=FBgn0263607.1 300 350 +
Chr1	stalkie_big_nohaplotig	CDS	15670672	15670970	.	-	0	Parent=FBgn0263607.1.mrna1;Target=FBgn0263607.1 1 299 +
Chr1	gffcl	locus	15676177	15678665	.	-	.	ID=RLOC_00006065;geneIDs=FBgn0263606.1.path1;transcripts=FBgn0263606.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15676177	15678665	.	-	.	ID=FBgn0263606.1.mrna1;geneID=FBgn0263606.1.path1;Name=FBgn0263606.1;Dir=sensecoverage=100.0;identity=99.5;matches=857;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006065
Chr1	stalkie_big_nohaplotig	exon	15676177	15676561	99	-	.	Parent=FBgn0263606.1.mrna1;Target=FBgn0263606.1 477 861 +
Chr1	stalkie_big_nohaplotig	exon	15677998	15678110	100	-	.	Parent=FBgn0263606.1.mrna1;Target=FBgn0263606.1 364 476 +
Chr1	stalkie_big_nohaplotig	exon	15678171	15678486	99	-	.	Parent=FBgn0263606.1.mrna1;Target=FBgn0263606.1 48 363 +
Chr1	stalkie_big_nohaplotig	exon	15678619	15678665	100	-	.	Parent=FBgn0263606.1.mrna1;Target=FBgn0263606.1 1 47 +
Chr1	stalkie_big_nohaplotig	CDS	15676177	15676561	.	-	1	Parent=FBgn0263606.1.mrna1;Target=FBgn0263606.1 477 861 +
Chr1	stalkie_big_nohaplotig	CDS	15677998	15678110	.	-	0	Parent=FBgn0263606.1.mrna1;Target=FBgn0263606.1 364 476 +
Chr1	stalkie_big_nohaplotig	CDS	15678171	15678486	.	-	1	Parent=FBgn0263606.1.mrna1;Target=FBgn0263606.1 48 363 +
Chr1	stalkie_big_nohaplotig	CDS	15678619	15678665	.	-	0	Parent=FBgn0263606.1.mrna1;Target=FBgn0263606.1 1 47 +
Chr1	gffcl	locus	15684249	15684588	.	+	.	ID=RLOC_00006066;geneIDs=comp169723_c0_seq1.path1;transcripts=comp169723_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15684249	15684588	.	+	.	ID=comp169723_c0_seq1.mrna1;geneID=comp169723_c0_seq1.path1;Name=comp169723_c0_seq1;Dir=indeterminatecoverage=94.7;identity=100.0;matches=340;mismatches=0;indels=0;unknowns=0;Target=comp169723_c0_seq1 340 1 .;CDS_Target=comp169723_c0_seq1 323 210 .;locus=RLOC_00006066
Chr1	stalkie_big_nohaplotig	exon	15684249	15684588	100	+	.	Parent=comp169723_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15684458	15684571	.	+	0	Parent=comp169723_c0_seq1.mrna1
Chr1	gffcl	locus	15699282	15706870	.	+	.	ID=RLOC_00006067;geneIDs=FBgn0003261.2.path1;transcripts=FBgn0003261.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15699282	15706870	.	+	.	ID=FBgn0003261.2.mrna1;geneID=FBgn0003261.2.path1;Name=FBgn0003261.2;Dir=sensecoverage=100.0;identity=99.3;matches=2148;mismatches=15;indels=0;unknowns=0;locus=RLOC_00006067
Chr1	stalkie_big_nohaplotig	exon	15699282	15699337	96	+	.	Parent=FBgn0003261.2.mrna1;Target=FBgn0003261.2 1 56 +
Chr1	stalkie_big_nohaplotig	exon	15704307	15704422	98	+	.	Parent=FBgn0003261.2.mrna1;Target=FBgn0003261.2 57 172 +
Chr1	stalkie_big_nohaplotig	exon	15704608	15705383	99	+	.	Parent=FBgn0003261.2.mrna1;Target=FBgn0003261.2 173 948 +
Chr1	stalkie_big_nohaplotig	exon	15705446	15706451	99	+	.	Parent=FBgn0003261.2.mrna1;Target=FBgn0003261.2 949 1954 +
Chr1	stalkie_big_nohaplotig	exon	15706662	15706870	99	+	.	Parent=FBgn0003261.2.mrna1;Target=FBgn0003261.2 1955 2163 +
Chr1	stalkie_big_nohaplotig	CDS	15699282	15699337	.	+	0	Parent=FBgn0003261.2.mrna1;Target=FBgn0003261.2 1 56 +
Chr1	stalkie_big_nohaplotig	CDS	15704307	15704422	.	+	1	Parent=FBgn0003261.2.mrna1;Target=FBgn0003261.2 57 172 +
Chr1	stalkie_big_nohaplotig	CDS	15704608	15705383	.	+	2	Parent=FBgn0003261.2.mrna1;Target=FBgn0003261.2 173 948 +
Chr1	stalkie_big_nohaplotig	CDS	15705446	15706451	.	+	0	Parent=FBgn0003261.2.mrna1;Target=FBgn0003261.2 949 1954 +
Chr1	stalkie_big_nohaplotig	CDS	15706662	15706870	.	+	2	Parent=FBgn0003261.2.mrna1;Target=FBgn0003261.2 1955 2163 +
Chr1	gffcl	locus	15700919	15701582	.	-	.	ID=RLOC_00006068;geneIDs=FBgn0031485.2.path1;transcripts=FBgn0031485.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15700919	15701582	.	-	.	ID=FBgn0031485.2.mrna1;geneID=FBgn0031485.2.path1;Name=FBgn0031485.2;Dir=indeterminatecoverage=99.7;identity=98.9;matches=657;mismatches=7;indels=0;unknowns=0;Target=FBgn0031485.2 666 3 .;CDS_Target=FBgn0031485.2 666 4 .;locus=RLOC_00006068
Chr1	stalkie_big_nohaplotig	exon	15700919	15701582	98	-	.	Parent=FBgn0031485.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15700919	15701581	.	-	0	Parent=FBgn0031485.2.mrna1
Chr1	gffcl	locus	15715860	15717609	.	-	.	ID=RLOC_00006070;geneIDs=FBgn0029002.1.path2;transcripts=FBgn0029002.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	15715860	15717609	.	-	.	ID=FBgn0029002.1.mrna2;geneID=FBgn0029002.1.path2;Name=FBgn0029002.1;Dir=sensecoverage=20.3;identity=100.0;matches=186;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006070
Chr1	stalkie_big_nohaplotig	exon	15715860	15715888	100	-	.	Parent=FBgn0029002.1.mrna2;Target=FBgn0029002.1 887 915 +
Chr1	stalkie_big_nohaplotig	exon	15717453	15717609	100	-	.	Parent=FBgn0029002.1.mrna2;Target=FBgn0029002.1 730 886 +
Chr1	gffcl	locus	15779015	15784102	.	+	.	ID=RLOC_00006071;geneIDs=FBgn0035281.1.path1;transcripts=FBgn0035281.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15779015	15784102	.	+	.	ID=FBgn0035281.1.mrna1;geneID=FBgn0035281.1.path1;Name=FBgn0035281.1;Dir=sensecoverage=100.0;identity=100.0;matches=570;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006071
Chr1	stalkie_big_nohaplotig	exon	15779015	15779053	100	+	.	Parent=FBgn0035281.1.mrna1;Target=FBgn0035281.1 1 39 +
Chr1	stalkie_big_nohaplotig	exon	15779384	15779518	100	+	.	Parent=FBgn0035281.1.mrna1;Target=FBgn0035281.1 40 174 +
Chr1	stalkie_big_nohaplotig	exon	15783707	15784102	100	+	.	Parent=FBgn0035281.1.mrna1;Target=FBgn0035281.1 175 570 +
Chr1	stalkie_big_nohaplotig	CDS	15779015	15779053	.	+	0	Parent=FBgn0035281.1.mrna1;Target=FBgn0035281.1 1 39 +
Chr1	stalkie_big_nohaplotig	CDS	15779384	15779518	.	+	0	Parent=FBgn0035281.1.mrna1;Target=FBgn0035281.1 40 174 +
Chr1	stalkie_big_nohaplotig	CDS	15783707	15784102	.	+	0	Parent=FBgn0035281.1.mrna1;Target=FBgn0035281.1 175 570 +
Chr1	gffcl	locus	15780738	15781425	.	.	.	ID=RLOC_00006072;geneIDs=comp144765_c0_seq1.path1,comp1068797_c0_seq1.path1;transcripts=comp144765_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15781039	15781425	.	+	.	ID=comp144765_c0_seq1.mrna1;geneID=comp144765_c0_seq1.path1;Name=comp144765_c0_seq1;Dir=indeterminatecoverage=93.9;identity=99.5;matches=385;mismatches=2;indels=0;unknowns=0;Target=comp144765_c0_seq1 412 26 .;CDS_Target=comp144765_c0_seq1 411 334 .;locus=RLOC_00006072
Chr1	stalkie_big_nohaplotig	exon	15781039	15781425	99	+	.	Parent=comp144765_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15781347	15781424	.	+	0	Parent=comp144765_c0_seq1.mrna1
Chr1	gffcl	locus	15781495	15782169	.	+	.	ID=RLOC_00006073;geneIDs=comp117481_c0_seq1.path1;transcripts=comp117481_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15781495	15782169	.	+	.	ID=comp117481_c0_seq1.mrna1;geneID=comp117481_c0_seq1.path1;Name=comp117481_c0_seq1;Dir=indeterminatecoverage=98.5;identity=100.0;matches=675;mismatches=0;indels=0;unknowns=0;Target=comp117481_c0_seq1 685 11 .;CDS_Target=comp117481_c0_seq1 206 12 .;locus=RLOC_00006073
Chr1	stalkie_big_nohaplotig	exon	15781495	15782169	100	+	.	Parent=comp117481_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15781496	15781690	.	+	0	Parent=comp117481_c0_seq1.mrna1
Chr1	gffcl	locus	15783051	15783550	.	+	.	ID=RLOC_00006074;geneIDs=comp2004738_c0_seq1.path1;transcripts=comp2004738_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15783051	15783550	.	+	.	ID=comp2004738_c0_seq1.mrna1;geneID=comp2004738_c0_seq1.path1;Name=comp2004738_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=500;mismatches=0;indels=1;unknowns=0;Target=comp2004738_c0_seq1 501 1 .;CDS_Target=comp2004738_c0_seq1 99 1 .;locus=RLOC_00006074
Chr1	stalkie_big_nohaplotig	exon	15783051	15783550	99	+	.	Parent=comp2004738_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15783051	15783148	.	+	0	Parent=comp2004738_c0_seq1.mrna1
Chr1	gffcl	locus	15812155	15822346	.	+	.	ID=RLOC_00006075;geneIDs=FBgn0035280.1.path1;transcripts=FBgn0035280.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15812155	15822346	.	+	.	ID=FBgn0035280.1.mrna1;geneID=FBgn0035280.1.path1;Name=FBgn0035280.1;Dir=sensecoverage=100.0;identity=99.8;matches=548;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006075
Chr1	stalkie_big_nohaplotig	exon	15812155	15812259	100	+	.	Parent=FBgn0035280.1.mrna1;Target=FBgn0035280.1 1 105 +
Chr1	stalkie_big_nohaplotig	exon	15814343	15814439	100	+	.	Parent=FBgn0035280.1.mrna1;Target=FBgn0035280.1 106 202 +
Chr1	stalkie_big_nohaplotig	exon	15815325	15815552	99	+	.	Parent=FBgn0035280.1.mrna1;Target=FBgn0035280.1 203 430 +
Chr1	stalkie_big_nohaplotig	exon	15822228	15822346	100	+	.	Parent=FBgn0035280.1.mrna1;Target=FBgn0035280.1 431 549 +
Chr1	stalkie_big_nohaplotig	CDS	15812155	15812259	.	+	0	Parent=FBgn0035280.1.mrna1;Target=FBgn0035280.1 1 105 +
Chr1	stalkie_big_nohaplotig	CDS	15814343	15814439	.	+	0	Parent=FBgn0035280.1.mrna1;Target=FBgn0035280.1 106 202 +
Chr1	stalkie_big_nohaplotig	CDS	15815325	15815552	.	+	2	Parent=FBgn0035280.1.mrna1;Target=FBgn0035280.1 203 430 +
Chr1	stalkie_big_nohaplotig	CDS	15822228	15822346	.	+	2	Parent=FBgn0035280.1.mrna1;Target=FBgn0035280.1 431 549 +
Chr1	gffcl	locus	15815666	15816358	.	+	.	ID=RLOC_00006076;geneIDs=comp118666_c0_seq1.path1;transcripts=comp118666_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15815666	15816358	.	+	.	ID=comp118666_c0_seq1.mrna1;geneID=comp118666_c0_seq1.path1;Name=comp118666_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=692;mismatches=1;indels=0;unknowns=0;Target=comp118666_c0_seq1 693 1 .;CDS_Target=comp118666_c0_seq1 692 585 .;locus=RLOC_00006076
Chr1	stalkie_big_nohaplotig	exon	15815666	15816358	99	+	.	Parent=comp118666_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15816250	15816357	.	+	0	Parent=comp118666_c0_seq1.mrna1
Chr1	gffcl	locus	15822591	15823151	.	-	.	ID=RLOC_00006077;geneIDs=comp154487_c0_seq1.path1;transcripts=comp154487_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15822591	15823151	.	-	.	ID=comp154487_c0_seq1.mrna1;geneID=comp154487_c0_seq1.path1;Name=comp154487_c0_seq1;Dir=indeterminatecoverage=95.3;identity=90.6;matches=508;mismatches=4;indels=49;unknowns=0;Target=comp154487_c0_seq1 513 2 .;CDS_Target=comp154487_c0_seq1 289 68 .;locus=RLOC_00006077
Chr1	stalkie_big_nohaplotig	exon	15822591	15823151	90	-	.	Parent=comp154487_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15822864	15823085	.	-	0	Parent=comp154487_c0_seq1.mrna1
Chr1	gffcl	locus	15844787	15864064	.	+	.	ID=RLOC_00006078;geneIDs=comp150757_c0_seq1.path1;transcripts=comp150757_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15844787	15864064	.	+	.	ID=comp150757_c0_seq1.mrna1;geneID=comp150757_c0_seq1.path1;Name=comp150757_c0_seq1;Dir=antisensecoverage=92.6;identity=99.4;matches=623;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006078
Chr1	stalkie_big_nohaplotig	exon	15844787	15844931	98	+	.	Parent=comp150757_c0_seq1.mrna1;Target=comp150757_c0_seq1 507 651 -
Chr1	stalkie_big_nohaplotig	exon	15860753	15860890	99	+	.	Parent=comp150757_c0_seq1.mrna1;Target=comp150757_c0_seq1 369 506 -
Chr1	stalkie_big_nohaplotig	exon	15863721	15864064	99	+	.	Parent=comp150757_c0_seq1.mrna1;Target=comp150757_c0_seq1 25 368 -
Chr1	stalkie_big_nohaplotig	CDS	15860756	15860890	.	+	0	Parent=comp150757_c0_seq1.mrna1;Target=comp150757_c0_seq1 369 503 .
Chr1	stalkie_big_nohaplotig	CDS	15863721	15864002	.	+	0	Parent=comp150757_c0_seq1.mrna1;Target=comp150757_c0_seq1 87 368 .
Chr1	gffcl	locus	15895771	15896937	.	+	.	ID=RLOC_00006079;geneIDs=comp106138_c0_seq1.path1;transcripts=comp106138_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15895771	15896937	.	+	.	ID=comp106138_c0_seq1.mrna1;geneID=comp106138_c0_seq1.path1;Name=comp106138_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.9;matches=1161;mismatches=6;indels=7;unknowns=0;Target=comp106138_c0_seq1 1175 2 .;CDS_Target=comp106138_c0_seq1 881 780 .;locus=RLOC_00006079
Chr1	stalkie_big_nohaplotig	exon	15895771	15896937	98	+	.	Parent=comp106138_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15896542	15896643	.	+	0	Parent=comp106138_c0_seq1.mrna1
Chr1	gffcl	locus	15897242	15898574	.	-	.	ID=RLOC_00006080;geneIDs=comp138968_c0_seq1.path1;transcripts=comp138968_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15897242	15898574	.	-	.	ID=comp138968_c0_seq1.mrna1;geneID=comp138968_c0_seq1.path1;Name=comp138968_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.3;matches=1293;mismatches=32;indels=18;unknowns=0;Target=comp138968_c0_seq1 1335 1 .;CDS_Target=comp138968_c0_seq1 1329 1186 .;locus=RLOC_00006080
Chr1	stalkie_big_nohaplotig	exon	15897242	15898574	96	-	.	Parent=comp138968_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	15897248	15897391	.	-	0	Parent=comp138968_c0_seq1.mrna1
Chr1	gffcl	locus	15898750	15928253	.	-	.	ID=RLOC_00006081;geneIDs=comp151841_c0_seq1.path1;transcripts=comp151841_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15898750	15928253	.	-	.	ID=comp151841_c0_seq1.mrna1;geneID=comp151841_c0_seq1.path1;Name=comp151841_c0_seq1;Dir=indeterminatecoverage=90.3;identity=95.8;matches=729;mismatches=8;indels=24;unknowns=0;Target=comp151841_c0_seq1 509 429 .;locus=RLOC_00006081
Chr1	stalkie_big_nohaplotig	exon	15898750	15899475	95	-	.	Parent=comp151841_c0_seq1.mrna1;Target=comp151841_c0_seq1 829 80 .
Chr1	stalkie_big_nohaplotig	exon	15910101	15910106	100	-	.	Parent=comp151841_c0_seq1.mrna1;Target=comp151841_c0_seq1 79 74 .
Chr1	stalkie_big_nohaplotig	exon	15913814	15913815	100	-	.	Parent=comp151841_c0_seq1.mrna1;Target=comp151841_c0_seq1 73 72 .
Chr1	stalkie_big_nohaplotig	exon	15928251	15928253	100	-	.	Parent=comp151841_c0_seq1.mrna1;Target=comp151841_c0_seq1 71 69 .
Chr1	stalkie_big_nohaplotig	CDS	15899046	15899126	.	-	0	Parent=comp151841_c0_seq1.mrna1
Chr1	gffcl	locus	15921905	15922555	.	-	.	ID=RLOC_00006082;geneIDs=comp146361_c0_seq1.path1;transcripts=comp146361_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15921905	15922555	.	-	.	ID=comp146361_c0_seq1.mrna1;geneID=comp146361_c0_seq1.path1;Name=comp146361_c0_seq1;Dir=antisensecoverage=92.7;identity=98.9;matches=466;mismatches=4;indels=1;unknowns=0;locus=RLOC_00006082
Chr1	stalkie_big_nohaplotig	exon	15921905	15922125	97	-	.	Parent=comp146361_c0_seq1.mrna1;Target=comp146361_c0_seq1 17 238 -
Chr1	stalkie_big_nohaplotig	exon	15922184	15922332	100	-	.	Parent=comp146361_c0_seq1.mrna1;Target=comp146361_c0_seq1 239 387 -
Chr1	stalkie_big_nohaplotig	exon	15922456	15922555	100	-	.	Parent=comp146361_c0_seq1.mrna1;Target=comp146361_c0_seq1 388 487 -
Chr1	stalkie_big_nohaplotig	CDS	15922202	15922332	.	-	2	Parent=comp146361_c0_seq1.mrna1;Target=comp146361_c0_seq1 257 387 .
Chr1	stalkie_big_nohaplotig	CDS	15922456	15922555	.	-	0	Parent=comp146361_c0_seq1.mrna1;Target=comp146361_c0_seq1 388 487 .
Chr1	gffcl	locus	15956765	15960647	.	-	.	ID=RLOC_00006083;geneIDs=FBgn0035875.1.path1;transcripts=FBgn0035875.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15956765	15960647	.	-	.	ID=FBgn0035875.1.mrna1;geneID=FBgn0035875.1.path1;Name=FBgn0035875.1;Dir=sensecoverage=100.0;identity=99.8;matches=461;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006083
Chr1	stalkie_big_nohaplotig	exon	15956765	15956898	99	-	.	Parent=FBgn0035875.1.mrna1;Target=FBgn0035875.1 329 462 +
Chr1	stalkie_big_nohaplotig	exon	15956967	15957063	100	-	.	Parent=FBgn0035875.1.mrna1;Target=FBgn0035875.1 232 328 +
Chr1	stalkie_big_nohaplotig	exon	15957794	15958009	100	-	.	Parent=FBgn0035875.1.mrna1;Target=FBgn0035875.1 16 231 +
Chr1	stalkie_big_nohaplotig	exon	15960633	15960647	100	-	.	Parent=FBgn0035875.1.mrna1;Target=FBgn0035875.1 1 15 +
Chr1	stalkie_big_nohaplotig	CDS	15956765	15956898	.	-	2	Parent=FBgn0035875.1.mrna1;Target=FBgn0035875.1 329 462 +
Chr1	stalkie_big_nohaplotig	CDS	15956967	15957063	.	-	0	Parent=FBgn0035875.1.mrna1;Target=FBgn0035875.1 232 328 +
Chr1	stalkie_big_nohaplotig	CDS	15957794	15958009	.	-	0	Parent=FBgn0035875.1.mrna1;Target=FBgn0035875.1 16 231 +
Chr1	stalkie_big_nohaplotig	CDS	15960633	15960647	.	-	0	Parent=FBgn0035875.1.mrna1;Target=FBgn0035875.1 1 15 +
Chr1	gffcl	locus	15980713	15984354	.	-	.	ID=RLOC_00006084;geneIDs=FBgn0085491.1.path1;transcripts=FBgn0085491.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15980713	15984354	.	-	.	ID=FBgn0085491.1.mrna1;geneID=FBgn0085491.1.path1;Name=FBgn0085491.1;Dir=sensecoverage=99.8;identity=99.3;matches=817;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006084
Chr1	stalkie_big_nohaplotig	exon	15980713	15981278	99	-	.	Parent=FBgn0085491.1.mrna1;Target=FBgn0085491.1 260 825 +
Chr1	stalkie_big_nohaplotig	exon	15981367	15981505	98	-	.	Parent=FBgn0085491.1.mrna1;Target=FBgn0085491.1 121 259 +
Chr1	stalkie_big_nohaplotig	exon	15984237	15984354	100	-	.	Parent=FBgn0085491.1.mrna1;Target=FBgn0085491.1 3 120 +
Chr1	stalkie_big_nohaplotig	CDS	15980713	15981278	.	-	2	Parent=FBgn0085491.1.mrna1;Target=FBgn0085491.1 260 825 +
Chr1	stalkie_big_nohaplotig	CDS	15981367	15981505	.	-	0	Parent=FBgn0085491.1.mrna1;Target=FBgn0085491.1 121 259 +
Chr1	stalkie_big_nohaplotig	CDS	15984237	15984353	.	-	0	Parent=FBgn0085491.1.mrna1;Target=FBgn0085491.1 4 120 +
Chr1	gffcl	locus	15989940	15992480	.	-	.	ID=RLOC_00006085;geneIDs=FBgn0250833.1.path1;transcripts=FBgn0250833.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	15989940	15992480	.	-	.	ID=FBgn0250833.1.mrna1;geneID=FBgn0250833.1.path1;Name=FBgn0250833.1;Dir=sensecoverage=100.0;identity=100.0;matches=558;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006085
Chr1	stalkie_big_nohaplotig	exon	15989940	15990209	100	-	.	Parent=FBgn0250833.1.mrna1;Target=FBgn0250833.1 289 558 +
Chr1	stalkie_big_nohaplotig	exon	15990338	15990463	100	-	.	Parent=FBgn0250833.1.mrna1;Target=FBgn0250833.1 163 288 +
Chr1	stalkie_big_nohaplotig	exon	15992319	15992480	100	-	.	Parent=FBgn0250833.1.mrna1;Target=FBgn0250833.1 1 162 +
Chr1	stalkie_big_nohaplotig	CDS	15989940	15990209	.	-	0	Parent=FBgn0250833.1.mrna1;Target=FBgn0250833.1 289 558 +
Chr1	stalkie_big_nohaplotig	CDS	15990338	15990463	.	-	0	Parent=FBgn0250833.1.mrna1;Target=FBgn0250833.1 163 288 +
Chr1	stalkie_big_nohaplotig	CDS	15992319	15992480	.	-	0	Parent=FBgn0250833.1.mrna1;Target=FBgn0250833.1 1 162 +
Chr1	gffcl	locus	16029546	16033691	.	+	.	ID=RLOC_00006086;geneIDs=FBgn0037082.1.path1;transcripts=FBgn0037082.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16029546	16033691	.	+	.	ID=FBgn0037082.1.mrna1;geneID=FBgn0037082.1.path1;Name=FBgn0037082.1;Dir=sensecoverage=99.9;identity=99.4;matches=3166;mismatches=18;indels=0;unknowns=0;locus=RLOC_00006086
Chr1	stalkie_big_nohaplotig	exon	16029546	16031324	99	+	.	Parent=FBgn0037082.1.mrna1;Target=FBgn0037082.1 1 1779 +
Chr1	stalkie_big_nohaplotig	exon	16031385	16032029	99	+	.	Parent=FBgn0037082.1.mrna1;Target=FBgn0037082.1 1780 2424 +
Chr1	stalkie_big_nohaplotig	exon	16032092	16032221	99	+	.	Parent=FBgn0037082.1.mrna1;Target=FBgn0037082.1 2425 2554 +
Chr1	stalkie_big_nohaplotig	exon	16033062	16033691	99	+	.	Parent=FBgn0037082.1.mrna1;Target=FBgn0037082.1 2555 3184 +
Chr1	stalkie_big_nohaplotig	CDS	16029546	16031324	.	+	0	Parent=FBgn0037082.1.mrna1;Target=FBgn0037082.1 1 1779 +
Chr1	stalkie_big_nohaplotig	CDS	16031385	16032029	.	+	0	Parent=FBgn0037082.1.mrna1;Target=FBgn0037082.1 1780 2424 +
Chr1	stalkie_big_nohaplotig	CDS	16032092	16032221	.	+	0	Parent=FBgn0037082.1.mrna1;Target=FBgn0037082.1 2425 2554 +
Chr1	stalkie_big_nohaplotig	CDS	16033062	16033690	.	+	2	Parent=FBgn0037082.1.mrna1;Target=FBgn0037082.1 2555 3183 +
Chr1	gffcl	locus	16034249	16035006	.	-	.	ID=RLOC_00006087;geneIDs=comp105365_c0_seq1.path1;transcripts=comp105365_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16034249	16035006	.	-	.	ID=comp105365_c0_seq1.mrna1;geneID=comp105365_c0_seq1.path1;Name=comp105365_c0_seq1;Dir=sensecoverage=100.0;identity=87.2;matches=622;mismatches=31;indels=60;unknowns=0;Target=comp105365_c0_seq1 293 313 +;locus=RLOC_00006087
Chr1	stalkie_big_nohaplotig	exon	16034249	16034785	86	-	.	Parent=comp105365_c0_seq1.mrna1;Target=comp105365_c0_seq1 164 657 +
Chr1	stalkie_big_nohaplotig	exon	16034835	16035006	89	-	.	Parent=comp105365_c0_seq1.mrna1;Target=comp105365_c0_seq1 1 163 +
Chr1	stalkie_big_nohaplotig	CDS	16034613	16034633	.	-	0	Parent=comp105365_c0_seq1.mrna1
Chr1	gffcl	locus	16042293	16043032	.	-	.	ID=RLOC_00006088;geneIDs=comp114114_c0_seq1.path1;transcripts=comp114114_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16042293	16043032	.	-	.	ID=comp114114_c0_seq1.mrna1;geneID=comp114114_c0_seq1.path1;Name=comp114114_c0_seq1;Dir=indeterminatecoverage=98.5;identity=99.5;matches=737;mismatches=1;indels=3;unknowns=0;Target=comp114114_c0_seq1 750 12 .;CDS_Target=comp114114_c0_seq1 371 297 .;locus=RLOC_00006088
Chr1	stalkie_big_nohaplotig	exon	16042293	16043032	99	-	.	Parent=comp114114_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16042674	16042748	.	-	0	Parent=comp114114_c0_seq1.mrna1
Chr1	gffcl	locus	16043042	16043269	.	-	.	ID=RLOC_00006089;geneIDs=comp937631_c0_seq1.path1;transcripts=comp937631_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16043042	16043269	.	-	.	ID=comp937631_c0_seq1.mrna1;geneID=comp937631_c0_seq1.path1;Name=comp937631_c0_seq1;Dir=indeterminatecoverage=97.9;identity=99.6;matches=227;mismatches=1;indels=0;unknowns=0;Target=comp937631_c0_seq1 233 6 .;CDS_Target=comp937631_c0_seq1 64 8 .;locus=RLOC_00006089
Chr1	stalkie_big_nohaplotig	exon	16043042	16043269	99	-	.	Parent=comp937631_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16043211	16043267	.	-	0	Parent=comp937631_c0_seq1.mrna1
Chr1	gffcl	locus	16052423	16057915	.	-	.	ID=RLOC_00006091;geneIDs=FBgn0053288.1.path1;transcripts=FBgn0053288.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16052423	16057915	.	-	.	ID=FBgn0053288.1.mrna1;geneID=FBgn0053288.1.path1;Name=FBgn0053288.1;Dir=sensecoverage=100.0;identity=99.5;matches=2745;mismatches=12;indels=3;unknowns=0;locus=RLOC_00006091
Chr1	stalkie_big_nohaplotig	exon	16052423	16052652	99	-	.	Parent=FBgn0053288.1.mrna1;Target=FBgn0053288.1 2531 2760 +
Chr1	stalkie_big_nohaplotig	exon	16052722	16053711	99	-	.	Parent=FBgn0053288.1.mrna1;Target=FBgn0053288.1 1541 2530 +
Chr1	stalkie_big_nohaplotig	exon	16053782	16055098	99	-	.	Parent=FBgn0053288.1.mrna1;Target=FBgn0053288.1 221 1540 +
Chr1	stalkie_big_nohaplotig	exon	16057696	16057915	100	-	.	Parent=FBgn0053288.1.mrna1;Target=FBgn0053288.1 1 220 +
Chr1	stalkie_big_nohaplotig	CDS	16052423	16052652	.	-	2	Parent=FBgn0053288.1.mrna1;Target=FBgn0053288.1 2531 2760 +
Chr1	stalkie_big_nohaplotig	CDS	16052722	16053711	.	-	2	Parent=FBgn0053288.1.mrna1;Target=FBgn0053288.1 1541 2530 +
Chr1	stalkie_big_nohaplotig	CDS	16053782	16055098	.	-	2	Parent=FBgn0053288.1.mrna1;Target=FBgn0053288.1 221 1540 +
Chr1	stalkie_big_nohaplotig	CDS	16057696	16057915	.	-	0	Parent=FBgn0053288.1.mrna1;Target=FBgn0053288.1 1 220 +
Chr1	gffcl	locus	16075361	16083833	.	+	.	ID=RLOC_00006092;geneIDs=FBgn0037081.1.path1;transcripts=FBgn0037081.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16075361	16083833	.	+	.	ID=FBgn0037081.1.mrna1;geneID=FBgn0037081.1.path1;Name=FBgn0037081.1;Dir=sensecoverage=99.7;identity=99.1;matches=1700;mismatches=16;indels=0;unknowns=0;locus=RLOC_00006092
Chr1	stalkie_big_nohaplotig	exon	16075361	16076294	98	+	.	Parent=FBgn0037081.1.mrna1;Target=FBgn0037081.1 7 940 +
Chr1	stalkie_big_nohaplotig	exon	16076359	16076561	99	+	.	Parent=FBgn0037081.1.mrna1;Target=FBgn0037081.1 941 1143 +
Chr1	stalkie_big_nohaplotig	exon	16082973	16083139	100	+	.	Parent=FBgn0037081.1.mrna1;Target=FBgn0037081.1 1144 1310 +
Chr1	stalkie_big_nohaplotig	exon	16083212	16083398	99	+	.	Parent=FBgn0037081.1.mrna1;Target=FBgn0037081.1 1311 1497 +
Chr1	stalkie_big_nohaplotig	exon	16083557	16083693	100	+	.	Parent=FBgn0037081.1.mrna1;Target=FBgn0037081.1 1498 1634 +
Chr1	stalkie_big_nohaplotig	exon	16083746	16083833	100	+	.	Parent=FBgn0037081.1.mrna1;Target=FBgn0037081.1 1635 1722 +
Chr1	stalkie_big_nohaplotig	CDS	16075361	16076294	.	+	0	Parent=FBgn0037081.1.mrna1;Target=FBgn0037081.1 7 940 +
Chr1	stalkie_big_nohaplotig	CDS	16076359	16076561	.	+	2	Parent=FBgn0037081.1.mrna1;Target=FBgn0037081.1 941 1143 +
Chr1	stalkie_big_nohaplotig	CDS	16082973	16083139	.	+	0	Parent=FBgn0037081.1.mrna1;Target=FBgn0037081.1 1144 1310 +
Chr1	stalkie_big_nohaplotig	CDS	16083212	16083398	.	+	1	Parent=FBgn0037081.1.mrna1;Target=FBgn0037081.1 1311 1497 +
Chr1	stalkie_big_nohaplotig	CDS	16083557	16083693	.	+	0	Parent=FBgn0037081.1.mrna1;Target=FBgn0037081.1 1498 1634 +
Chr1	stalkie_big_nohaplotig	CDS	16083746	16083833	.	+	1	Parent=FBgn0037081.1.mrna1;Target=FBgn0037081.1 1635 1722 +
Chr1	gffcl	locus	16079353	16080709	.	-	.	ID=RLOC_00006093;geneIDs=comp153788_c0_seq1.path1;transcripts=comp153788_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16079353	16080709	.	-	.	ID=comp153788_c0_seq1.mrna1;geneID=comp153788_c0_seq1.path1;Name=comp153788_c0_seq1;Dir=indeterminatecoverage=98.6;identity=98.8;matches=1345;mismatches=12;indels=4;unknowns=0;Target=comp153788_c0_seq1 1361 1 .;CDS_Target=comp153788_c0_seq1 364 308 .;locus=RLOC_00006093
Chr1	stalkie_big_nohaplotig	exon	16079353	16080709	98	-	.	Parent=comp153788_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16080346	16080402	.	-	0	Parent=comp153788_c0_seq1.mrna1
Chr1	gffcl	locus	16113382	16113804	.	+	.	ID=RLOC_00006095;geneIDs=comp95813_c0_seq1.path1;transcripts=comp95813_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16113382	16113804	.	+	.	ID=comp95813_c0_seq1.mrna1;geneID=comp95813_c0_seq1.path1;Name=comp95813_c0_seq1;Dir=indeterminatecoverage=98.2;identity=99.3;matches=423;mismatches=0;indels=3;unknowns=0;Target=comp95813_c0_seq1 426 1 .;CDS_Target=comp95813_c0_seq1 231 1 .;locus=RLOC_00006095
Chr1	stalkie_big_nohaplotig	exon	16113382	16113804	99	+	.	Parent=comp95813_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16113382	16113612	.	+	0	Parent=comp95813_c0_seq1.mrna1
Chr1	gffcl	locus	16113894	16213084	.	+	.	ID=RLOC_00006096;geneIDs=comp158350_c2_seq1.path2;transcripts=comp158350_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	16113894	16213084	.	+	.	ID=comp158350_c2_seq1.mrna2;geneID=comp158350_c2_seq1.path2;Name=comp158350_c2_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=360;mismatches=1;indels=0;unknowns=0;Target=comp158350_c2_seq1 293 361 .;locus=RLOC_00006096
Chr1	stalkie_big_nohaplotig	exon	16113894	16114009	99	+	.	Parent=comp158350_c2_seq1.mrna2;Target=comp158350_c2_seq1 246 361 -
Chr1	stalkie_big_nohaplotig	exon	16212840	16213084	100	+	.	Parent=comp158350_c2_seq1.mrna2;Target=comp158350_c2_seq1 1 245 -
Chr1	stalkie_big_nohaplotig	CDS	16113894	16113962	.	+	0	Parent=comp158350_c2_seq1.mrna2
Chr1	gffcl	locus	16113894	16213084	.	-	.	ID=RLOC_00006097;geneIDs=comp158350_c2_seq1.path1;transcripts=comp158350_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16113894	16213084	.	-	.	ID=comp158350_c2_seq1.mrna1;geneID=comp158350_c2_seq1.path1;Name=comp158350_c2_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=360;mismatches=1;indels=0;unknowns=0;Target=comp158350_c2_seq1 293 361 .;locus=RLOC_00006097
Chr1	stalkie_big_nohaplotig	exon	16113894	16114138	100	-	.	Parent=comp158350_c2_seq1.mrna1;Target=comp158350_c2_seq1 1 245 -
Chr1	stalkie_big_nohaplotig	exon	16212969	16213084	99	-	.	Parent=comp158350_c2_seq1.mrna1;Target=comp158350_c2_seq1 246 361 -
Chr1	stalkie_big_nohaplotig	CDS	16213016	16213084	.	-	0	Parent=comp158350_c2_seq1.mrna1
Chr1	gffcl	locus	16115160	16116340	.	+	.	ID=RLOC_00006098;geneIDs=comp162439_c1_seq1.path1;transcripts=comp162439_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16115160	16116340	.	+	.	ID=comp162439_c1_seq1.mrna1;geneID=comp162439_c1_seq1.path1;Name=comp162439_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=1162;mismatches=19;indels=1;unknowns=0;Target=comp162439_c1_seq1 1182 1 .;CDS_Target=comp162439_c1_seq1 346 179 .;locus=RLOC_00006098
Chr1	stalkie_big_nohaplotig	exon	16115160	16116340	98	+	.	Parent=comp162439_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16115338	16115505	.	+	0	Parent=comp162439_c1_seq1.mrna1
Chr1	gffcl	locus	16117591	16118161	.	+	.	ID=RLOC_00006099;geneIDs=comp157887_c0_seq1.path1;transcripts=comp157887_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16117591	16118161	.	+	.	ID=comp157887_c0_seq1.mrna1;geneID=comp157887_c0_seq1.path1;Name=comp157887_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.9;matches=561;mismatches=10;indels=14;unknowns=0;Target=comp157887_c0_seq1 585 1 .;CDS_Target=comp157887_c0_seq1 302 162 .;locus=RLOC_00006099
Chr1	stalkie_big_nohaplotig	exon	16117591	16118161	95	+	.	Parent=comp157887_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16117750	16117887	.	+	0	Parent=comp157887_c0_seq1.mrna1
Chr1	gffcl	locus	16121621	16122376	.	-	.	ID=RLOC_00006100;geneIDs=FBgn0003042.1.path1;transcripts=FBgn0003042.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16121621	16122376	.	-	.	ID=FBgn0003042.1.mrna1;geneID=FBgn0003042.1.path1;Name=FBgn0003042.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=754;mismatches=2;indels=0;unknowns=0;Target=FBgn0003042.1 756 1 .;locus=RLOC_00006100
Chr1	stalkie_big_nohaplotig	exon	16121621	16122376	99	-	.	Parent=FBgn0003042.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16121621	16122376	.	-	0	Parent=FBgn0003042.1.mrna1
Chr1	gffcl	locus	16134814	16135578	.	+	.	ID=RLOC_00006101;geneIDs=comp149529_c1_seq1.path1;transcripts=comp149529_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16134814	16135578	.	+	.	ID=comp149529_c1_seq1.mrna1;geneID=comp149529_c1_seq1.path1;Name=comp149529_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=762;mismatches=3;indels=0;unknowns=0;Target=comp149529_c1_seq1 765 1 .;CDS_Target=comp149529_c1_seq1 82 2 .;locus=RLOC_00006101
Chr1	stalkie_big_nohaplotig	exon	16134814	16135578	99	+	.	Parent=comp149529_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16134815	16134895	.	+	0	Parent=comp149529_c1_seq1.mrna1
Chr1	gffcl	locus	16135739	16136527	.	.	.	ID=RLOC_00006102;geneIDs=comp104594_c0_seq1.path1,comp146991_c0_seq1.path1;transcripts=comp146991_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16135948	16136527	.	-	.	ID=comp146991_c0_seq1.mrna1;geneID=comp146991_c0_seq1.path1;Name=comp146991_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.8;matches=567;mismatches=13;indels=0;unknowns=0;Target=comp146991_c0_seq1 581 2 .;CDS_Target=comp146991_c0_seq1 385 218 .;locus=RLOC_00006102
Chr1	stalkie_big_nohaplotig	exon	16135948	16136527	97	-	.	Parent=comp146991_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16136144	16136311	.	-	0	Parent=comp146991_c0_seq1.mrna1
Chr1	gffcl	locus	16194525	16201082	.	+	.	ID=RLOC_00006104;geneIDs=comp160325_c0_seq1.path1;transcripts=comp160325_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16194525	16201082	.	+	.	ID=comp160325_c0_seq1.mrna1;geneID=comp160325_c0_seq1.path1;Name=comp160325_c0_seq1;Dir=indeterminatecoverage=97.7;identity=96.7;matches=1488;mismatches=48;indels=2;unknowns=0;Target=comp160325_c0_seq1 205 128 .;locus=RLOC_00006104
Chr1	stalkie_big_nohaplotig	exon	16194525	16194530	100	+	.	Parent=comp160325_c0_seq1.mrna1;Target=comp160325_c0_seq1 42 37 .
Chr1	stalkie_big_nohaplotig	exon	16195788	16195794	100	+	.	Parent=comp160325_c0_seq1.mrna1;Target=comp160325_c0_seq1 49 43 .
Chr1	stalkie_big_nohaplotig	exon	16198307	16198319	84	+	.	Parent=comp160325_c0_seq1.mrna1;Target=comp160325_c0_seq1 62 50 .
Chr1	stalkie_big_nohaplotig	exon	16198833	16198837	100	+	.	Parent=comp160325_c0_seq1.mrna1;Target=comp160325_c0_seq1 67 63 .
Chr1	stalkie_big_nohaplotig	exon	16199578	16201082	96	+	.	Parent=comp160325_c0_seq1.mrna1;Target=comp160325_c0_seq1 1574 68 .
Chr1	stalkie_big_nohaplotig	CDS	16199637	16199714	.	+	0	Parent=comp160325_c0_seq1.mrna1
Chr1	gffcl	locus	16199078	16202965	.	-	.	ID=RLOC_00006105;geneIDs=comp111308_c0_seq1.path1;transcripts=comp111308_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16199078	16202965	.	-	.	ID=comp111308_c0_seq1.mrna1;geneID=comp111308_c0_seq1.path1;Name=comp111308_c0_seq1;Dir=indeterminatecoverage=85.1;identity=96.5;matches=361;mismatches=4;indels=9;unknowns=0;Target=comp111308_c0_seq1 258 115 .;locus=RLOC_00006105
Chr1	stalkie_big_nohaplotig	exon	16199078	16199437	96	-	.	Parent=comp111308_c0_seq1.mrna1;Target=comp111308_c0_seq1 417 67 .
Chr1	stalkie_big_nohaplotig	exon	16200957	16200961	100	-	.	Parent=comp111308_c0_seq1.mrna1;Target=comp111308_c0_seq1 66 62 .
Chr1	stalkie_big_nohaplotig	exon	16202683	16202684	100	-	.	Parent=comp111308_c0_seq1.mrna1;Target=comp111308_c0_seq1 61 60 .
Chr1	stalkie_big_nohaplotig	exon	16202959	16202965	100	-	.	Parent=comp111308_c0_seq1.mrna1;Target=comp111308_c0_seq1 59 53 .
Chr1	stalkie_big_nohaplotig	CDS	16199237	16199380	.	-	0	Parent=comp111308_c0_seq1.mrna1
Chr1	gffcl	locus	16201207	16201460	.	-	.	ID=RLOC_00006106;geneIDs=comp113155_c0_seq1.path1;transcripts=comp113155_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16201207	16201460	.	-	.	ID=comp113155_c0_seq1.mrna1;geneID=comp113155_c0_seq1.path1;Name=comp113155_c0_seq1;Dir=indeterminatecoverage=96.6;identity=100.0;matches=254;mismatches=0;indels=0;unknowns=0;Target=comp113155_c0_seq1 254 1 .;CDS_Target=comp113155_c0_seq1 135 1 .;locus=RLOC_00006106
Chr1	stalkie_big_nohaplotig	exon	16201207	16201460	100	-	.	Parent=comp113155_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16201326	16201460	.	-	0	Parent=comp113155_c0_seq1.mrna1
Chr1	gffcl	locus	16202278	16202668	.	-	.	ID=RLOC_00006107;geneIDs=comp134699_c0_seq1.path1;transcripts=comp134699_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16202278	16202668	.	-	.	ID=comp134699_c0_seq1.mrna1;geneID=comp134699_c0_seq1.path1;Name=comp134699_c0_seq1;Dir=indeterminatecoverage=90.5;identity=100.0;matches=391;mismatches=0;indels=0;unknowns=0;Target=comp134699_c0_seq1 391 1 .;CDS_Target=comp134699_c0_seq1 82 2 .;locus=RLOC_00006107
Chr1	stalkie_big_nohaplotig	exon	16202278	16202668	100	-	.	Parent=comp134699_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16202587	16202667	.	-	0	Parent=comp134699_c0_seq1.mrna1
Chr1	gffcl	locus	16205328	16208991	.	+	.	ID=RLOC_00006108;geneIDs=FBgn0037073.1.path1;transcripts=FBgn0037073.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16205328	16208991	.	+	.	ID=FBgn0037073.1.mrna1;geneID=FBgn0037073.1.path1;Name=FBgn0037073.1;Dir=sensecoverage=100.0;identity=99.1;matches=2413;mismatches=20;indels=3;unknowns=0;locus=RLOC_00006108
Chr1	stalkie_big_nohaplotig	exon	16205328	16205439	97	+	.	Parent=FBgn0037073.1.mrna1;Target=FBgn0037073.1 1 112 +
Chr1	stalkie_big_nohaplotig	exon	16205514	16205593	100	+	.	Parent=FBgn0037073.1.mrna1;Target=FBgn0037073.1 113 192 +
Chr1	stalkie_big_nohaplotig	exon	16205655	16206174	99	+	.	Parent=FBgn0037073.1.mrna1;Target=FBgn0037073.1 193 712 +
Chr1	stalkie_big_nohaplotig	exon	16206245	16207094	98	+	.	Parent=FBgn0037073.1.mrna1;Target=FBgn0037073.1 713 1565 +
Chr1	stalkie_big_nohaplotig	exon	16207997	16208120	99	+	.	Parent=FBgn0037073.1.mrna1;Target=FBgn0037073.1 1566 1689 +
Chr1	stalkie_big_nohaplotig	exon	16208184	16208450	98	+	.	Parent=FBgn0037073.1.mrna1;Target=FBgn0037073.1 1690 1956 +
Chr1	stalkie_big_nohaplotig	exon	16208512	16208991	98	+	.	Parent=FBgn0037073.1.mrna1;Target=FBgn0037073.1 1957 2436 +
Chr1	stalkie_big_nohaplotig	CDS	16205328	16205439	.	+	0	Parent=FBgn0037073.1.mrna1;Target=FBgn0037073.1 1 112 +
Chr1	stalkie_big_nohaplotig	CDS	16205514	16205593	.	+	2	Parent=FBgn0037073.1.mrna1;Target=FBgn0037073.1 113 192 +
Chr1	stalkie_big_nohaplotig	CDS	16205655	16206174	.	+	0	Parent=FBgn0037073.1.mrna1;Target=FBgn0037073.1 193 712 +
Chr1	stalkie_big_nohaplotig	CDS	16206245	16207094	.	+	2	Parent=FBgn0037073.1.mrna1;Target=FBgn0037073.1 713 1565 +
Chr1	stalkie_big_nohaplotig	CDS	16207997	16208120	.	+	1	Parent=FBgn0037073.1.mrna1;Target=FBgn0037073.1 1566 1689 +
Chr1	stalkie_big_nohaplotig	CDS	16208184	16208450	.	+	0	Parent=FBgn0037073.1.mrna1;Target=FBgn0037073.1 1690 1956 +
Chr1	stalkie_big_nohaplotig	CDS	16208512	16208991	.	+	0	Parent=FBgn0037073.1.mrna1;Target=FBgn0037073.1 1957 2436 +
Chr1	gffcl	locus	16216626	16227908	.	-	.	ID=RLOC_00006109;geneIDs=FBgn0037074.1.path1;transcripts=FBgn0037074.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16216626	16227908	.	-	.	ID=FBgn0037074.1.mrna1;geneID=FBgn0037074.1.path1;Name=FBgn0037074.1;Dir=sensecoverage=100.0;identity=99.6;matches=3772;mismatches=14;indels=0;unknowns=0;locus=RLOC_00006109
Chr1	stalkie_big_nohaplotig	exon	16216626	16216925	99	-	.	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 3487 3786 +
Chr1	stalkie_big_nohaplotig	exon	16216985	16217073	100	-	.	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 3398 3486 +
Chr1	stalkie_big_nohaplotig	exon	16217129	16217748	99	-	.	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 2778 3397 +
Chr1	stalkie_big_nohaplotig	exon	16217807	16218024	98	-	.	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 2560 2777 +
Chr1	stalkie_big_nohaplotig	exon	16218308	16218901	99	-	.	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 1966 2559 +
Chr1	stalkie_big_nohaplotig	exon	16218972	16219166	100	-	.	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 1771 1965 +
Chr1	stalkie_big_nohaplotig	exon	16219231	16219518	98	-	.	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 1483 1770 +
Chr1	stalkie_big_nohaplotig	exon	16219594	16219782	100	-	.	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 1294 1482 +
Chr1	stalkie_big_nohaplotig	exon	16220842	16220956	99	-	.	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 1179 1293 +
Chr1	stalkie_big_nohaplotig	exon	16221030	16221175	100	-	.	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 1033 1178 +
Chr1	stalkie_big_nohaplotig	exon	16222402	16222529	99	-	.	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 905 1032 +
Chr1	stalkie_big_nohaplotig	exon	16222590	16222761	100	-	.	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 733 904 +
Chr1	stalkie_big_nohaplotig	exon	16222835	16223093	99	-	.	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 474 732 +
Chr1	stalkie_big_nohaplotig	exon	16223172	16223430	100	-	.	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 215 473 +
Chr1	stalkie_big_nohaplotig	exon	16225025	16225191	100	-	.	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 48 214 +
Chr1	stalkie_big_nohaplotig	exon	16227862	16227908	100	-	.	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 1 47 +
Chr1	stalkie_big_nohaplotig	CDS	16216626	16216925	.	-	0	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 3487 3786 +
Chr1	stalkie_big_nohaplotig	CDS	16216985	16217073	.	-	2	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 3398 3486 +
Chr1	stalkie_big_nohaplotig	CDS	16217129	16217748	.	-	1	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 2778 3397 +
Chr1	stalkie_big_nohaplotig	CDS	16217807	16218024	.	-	0	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 2560 2777 +
Chr1	stalkie_big_nohaplotig	CDS	16218308	16218901	.	-	0	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 1966 2559 +
Chr1	stalkie_big_nohaplotig	CDS	16218972	16219166	.	-	0	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 1771 1965 +
Chr1	stalkie_big_nohaplotig	CDS	16219231	16219518	.	-	0	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 1483 1770 +
Chr1	stalkie_big_nohaplotig	CDS	16219594	16219782	.	-	0	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 1294 1482 +
Chr1	stalkie_big_nohaplotig	CDS	16220842	16220956	.	-	1	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 1179 1293 +
Chr1	stalkie_big_nohaplotig	CDS	16221030	16221175	.	-	0	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 1033 1178 +
Chr1	stalkie_big_nohaplotig	CDS	16222402	16222529	.	-	2	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 905 1032 +
Chr1	stalkie_big_nohaplotig	CDS	16222590	16222761	.	-	0	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 733 904 +
Chr1	stalkie_big_nohaplotig	CDS	16222835	16223093	.	-	1	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 474 732 +
Chr1	stalkie_big_nohaplotig	CDS	16223172	16223430	.	-	2	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 215 473 +
Chr1	stalkie_big_nohaplotig	CDS	16225025	16225191	.	-	1	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 48 214 +
Chr1	stalkie_big_nohaplotig	CDS	16227862	16227908	.	-	0	Parent=FBgn0037074.1.mrna1;Target=FBgn0037074.1 1 47 +
Chr1	gffcl	locus	16230745	16251261	.	+	.	ID=RLOC_00006110;geneIDs=FBgn0052436.1.path1;transcripts=FBgn0052436.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16230745	16251261	.	+	.	ID=FBgn0052436.1.mrna1;geneID=FBgn0052436.1.path1;Name=FBgn0052436.1;Dir=sensecoverage=58.6;identity=99.7;matches=3496;mismatches=11;indels=0;unknowns=0;locus=RLOC_00006110
Chr1	stalkie_big_nohaplotig	exon	16230745	16231314	99	+	.	Parent=FBgn0052436.1.mrna1;Target=FBgn0052436.1 1 570 +
Chr1	stalkie_big_nohaplotig	exon	16247843	16248095	100	+	.	Parent=FBgn0052436.1.mrna1;Target=FBgn0052436.1 571 823 +
Chr1	stalkie_big_nohaplotig	exon	16248161	16248275	100	+	.	Parent=FBgn0052436.1.mrna1;Target=FBgn0052436.1 824 938 +
Chr1	stalkie_big_nohaplotig	exon	16248335	16250844	99	+	.	Parent=FBgn0052436.1.mrna1;Target=FBgn0052436.1 939 3448 +
Chr1	stalkie_big_nohaplotig	exon	16251203	16251261	100	+	.	Parent=FBgn0052436.1.mrna1;Target=FBgn0052436.1 3449 3507 +
Chr1	stalkie_big_nohaplotig	CDS	16230745	16231314	.	+	0	Parent=FBgn0052436.1.mrna1;Target=FBgn0052436.1 1 570 +
Chr1	stalkie_big_nohaplotig	CDS	16247843	16248095	.	+	0	Parent=FBgn0052436.1.mrna1;Target=FBgn0052436.1 571 823 +
Chr1	stalkie_big_nohaplotig	CDS	16248161	16248275	.	+	2	Parent=FBgn0052436.1.mrna1;Target=FBgn0052436.1 824 938 +
Chr1	stalkie_big_nohaplotig	CDS	16248335	16250844	.	+	1	Parent=FBgn0052436.1.mrna1;Target=FBgn0052436.1 939 3448 +
Chr1	stalkie_big_nohaplotig	CDS	16251203	16251261	.	+	2	Parent=FBgn0052436.1.mrna1;Target=FBgn0052436.1 3449 3507 +
Chr1	gffcl	locus	16231563	16237002	.	-	.	ID=RLOC_00006111;geneIDs=FBgn0037076.1.path1;transcripts=FBgn0037076.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16231563	16237002	.	-	.	ID=FBgn0037076.1.mrna1;geneID=FBgn0037076.1.path1;Name=FBgn0037076.1;Dir=sensecoverage=100.0;identity=99.4;matches=1071;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006111
Chr1	stalkie_big_nohaplotig	exon	16231563	16232534	99	-	.	Parent=FBgn0037076.1.mrna1;Target=FBgn0037076.1 106 1077 +
Chr1	stalkie_big_nohaplotig	exon	16236898	16237002	99	-	.	Parent=FBgn0037076.1.mrna1;Target=FBgn0037076.1 1 105 +
Chr1	stalkie_big_nohaplotig	CDS	16231563	16232534	.	-	0	Parent=FBgn0037076.1.mrna1;Target=FBgn0037076.1 106 1077 +
Chr1	stalkie_big_nohaplotig	CDS	16236898	16237002	.	-	0	Parent=FBgn0037076.1.mrna1;Target=FBgn0037076.1 1 105 +
Chr1	gffcl	locus	16259473	16262327	.	+	.	ID=RLOC_00006112;geneIDs=FBgn0052437.1.path1;transcripts=FBgn0052437.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16259473	16262327	.	+	.	ID=FBgn0052437.1.mrna1;geneID=FBgn0052437.1.path1;Name=FBgn0052437.1;Dir=sensecoverage=100.0;identity=99.7;matches=2790;mismatches=9;indels=0;unknowns=0;locus=RLOC_00006112
Chr1	stalkie_big_nohaplotig	exon	16259473	16260885	99	+	.	Parent=FBgn0052437.1.mrna1;Target=FBgn0052437.1 1 1413 +
Chr1	stalkie_big_nohaplotig	exon	16260942	16262327	99	+	.	Parent=FBgn0052437.1.mrna1;Target=FBgn0052437.1 1414 2799 +
Chr1	stalkie_big_nohaplotig	CDS	16259473	16260885	.	+	0	Parent=FBgn0052437.1.mrna1;Target=FBgn0052437.1 1 1413 +
Chr1	stalkie_big_nohaplotig	CDS	16260942	16262327	.	+	0	Parent=FBgn0052437.1.mrna1;Target=FBgn0052437.1 1414 2799 +
Chr1	gffcl	locus	16266749	16267459	.	+	.	ID=RLOC_00006113;geneIDs=comp154504_c0_seq1.path1;transcripts=comp154504_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16266749	16267459	.	+	.	ID=comp154504_c0_seq1.mrna1;geneID=comp154504_c0_seq1.path1;Name=comp154504_c0_seq1;Dir=sensecoverage=97.4;identity=99.1;matches=637;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006113
Chr1	stalkie_big_nohaplotig	exon	16266749	16267079	98	+	.	Parent=comp154504_c0_seq1.mrna1;Target=comp154504_c0_seq1 15 345 +
Chr1	stalkie_big_nohaplotig	exon	16267148	16267459	99	+	.	Parent=comp154504_c0_seq1.mrna1;Target=comp154504_c0_seq1 346 657 +
Chr1	stalkie_big_nohaplotig	CDS	16266895	16267079	.	+	0	Parent=comp154504_c0_seq1.mrna1;Target=comp154504_c0_seq1 161 345 +
Chr1	stalkie_big_nohaplotig	CDS	16267148	16267256	.	+	1	Parent=comp154504_c0_seq1.mrna1;Target=comp154504_c0_seq1 346 454 +
Chr1	gffcl	locus	16269362	16281274	.	+	.	ID=RLOC_00006114;geneIDs=comp152688_c0_seq1.path1;transcripts=comp152688_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16269362	16281274	.	+	.	ID=comp152688_c0_seq1.mrna1;geneID=comp152688_c0_seq1.path1;Name=comp152688_c0_seq1;Dir=antisensecoverage=100.0;identity=98.1;matches=1081;mismatches=11;indels=10;unknowns=0;locus=RLOC_00006114
Chr1	stalkie_big_nohaplotig	exon	16269362	16269636	100	+	.	Parent=comp152688_c0_seq1.mrna1;Target=comp152688_c0_seq1 828 1102 -
Chr1	stalkie_big_nohaplotig	exon	16269701	16269879	100	+	.	Parent=comp152688_c0_seq1.mrna1;Target=comp152688_c0_seq1 649 827 -
Chr1	stalkie_big_nohaplotig	exon	16269973	16270224	100	+	.	Parent=comp152688_c0_seq1.mrna1;Target=comp152688_c0_seq1 397 648 -
Chr1	stalkie_big_nohaplotig	exon	16270285	16270322	100	+	.	Parent=comp152688_c0_seq1.mrna1;Target=comp152688_c0_seq1 359 396 -
Chr1	stalkie_big_nohaplotig	exon	16273493	16273680	90	+	.	Parent=comp152688_c0_seq1.mrna1;Target=comp152688_c0_seq1 161 358 -
Chr1	stalkie_big_nohaplotig	exon	16281115	16281274	98	+	.	Parent=comp152688_c0_seq1.mrna1;Target=comp152688_c0_seq1 1 160 -
Chr1	stalkie_big_nohaplotig	CDS	16269471	16269636	.	+	0	Parent=comp152688_c0_seq1.mrna1;Target=comp152688_c0_seq1 828 993 .
Chr1	stalkie_big_nohaplotig	CDS	16269701	16269879	.	+	2	Parent=comp152688_c0_seq1.mrna1;Target=comp152688_c0_seq1 649 827 .
Chr1	stalkie_big_nohaplotig	CDS	16269973	16270224	.	+	0	Parent=comp152688_c0_seq1.mrna1;Target=comp152688_c0_seq1 397 648 .
Chr1	stalkie_big_nohaplotig	CDS	16270285	16270299	.	+	0	Parent=comp152688_c0_seq1.mrna1;Target=comp152688_c0_seq1 382 396 .
Chr1	gffcl	locus	16295922	16299060	.	+	.	ID=RLOC_00006115;geneIDs=ORF91.path1;transcripts=ORF91.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16295922	16299060	.	+	.	ID=ORF91.mrna1;geneID=ORF91.path1;Name=ORF91;Dir=sensecoverage=100.0;identity=98.8;matches=3054;mismatches=32;indels=4;unknowns=0;locus=RLOC_00006115
Chr1	stalkie_big_nohaplotig	exon	16295922	16297628	98	+	.	Parent=ORF91.mrna1;Target=ORF91 1 1710 +
Chr1	stalkie_big_nohaplotig	exon	16297682	16299060	99	+	.	Parent=ORF91.mrna1;Target=ORF91 1711 3090 +
Chr1	stalkie_big_nohaplotig	CDS	16295922	16297628	.	+	0	Parent=ORF91.mrna1;Target=ORF91 1 1710 +
Chr1	stalkie_big_nohaplotig	CDS	16297682	16299060	.	+	0	Parent=ORF91.mrna1;Target=ORF91 1711 3090 +
Chr1	gffcl	locus	16494046	16497282	.	-	.	ID=RLOC_00006116;geneIDs=FBgn0037071.1.path1;transcripts=FBgn0037071.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16494046	16497282	.	-	.	ID=FBgn0037071.1.mrna1;geneID=FBgn0037071.1.path1;Name=FBgn0037071.1;Dir=sensecoverage=100.0;identity=99.9;matches=1034;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006116
Chr1	stalkie_big_nohaplotig	exon	16494046	16494933	99	-	.	Parent=FBgn0037071.1.mrna1;Target=FBgn0037071.1 148 1035 +
Chr1	stalkie_big_nohaplotig	exon	16494994	16495120	100	-	.	Parent=FBgn0037071.1.mrna1;Target=FBgn0037071.1 21 147 +
Chr1	stalkie_big_nohaplotig	exon	16497263	16497282	100	-	.	Parent=FBgn0037071.1.mrna1;Target=FBgn0037071.1 1 20 +
Chr1	stalkie_big_nohaplotig	CDS	16494046	16494933	.	-	0	Parent=FBgn0037071.1.mrna1;Target=FBgn0037071.1 148 1035 +
Chr1	stalkie_big_nohaplotig	CDS	16494994	16495120	.	-	1	Parent=FBgn0037071.1.mrna1;Target=FBgn0037071.1 21 147 +
Chr1	stalkie_big_nohaplotig	CDS	16497263	16497282	.	-	0	Parent=FBgn0037071.1.mrna1;Target=FBgn0037071.1 1 20 +
Chr1	gffcl	locus	16495480	16496299	.	-	.	ID=RLOC_00006117;geneIDs=comp152459_c0_seq1.path1;transcripts=comp152459_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16495480	16496299	.	-	.	ID=comp152459_c0_seq1.mrna1;geneID=comp152459_c0_seq1.path1;Name=comp152459_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=816;mismatches=4;indels=2;unknowns=0;Target=comp152459_c0_seq1 822 1 .;CDS_Target=comp152459_c0_seq1 340 155 .;locus=RLOC_00006117
Chr1	stalkie_big_nohaplotig	exon	16495480	16496299	99	-	.	Parent=comp152459_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16495960	16496145	.	-	0	Parent=comp152459_c0_seq1.mrna1
Chr1	gffcl	locus	16496889	16497139	.	+	.	ID=RLOC_00006118;geneIDs=comp122336_c0_seq1.path1;transcripts=comp122336_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16496889	16497139	.	+	.	ID=comp122336_c0_seq1.mrna1;geneID=comp122336_c0_seq1.path1;Name=comp122336_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=250;mismatches=1;indels=0;unknowns=0;Target=comp122336_c0_seq1 251 1 .;CDS_Target=comp122336_c0_seq1 156 1 .;locus=RLOC_00006118
Chr1	stalkie_big_nohaplotig	exon	16496889	16497139	99	+	.	Parent=comp122336_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16496889	16497044	.	+	0	Parent=comp122336_c0_seq1.mrna1
Chr1	gffcl	locus	16499423	16500804	.	+	.	ID=RLOC_00006119;geneIDs=FBgn0037070.1.path1;transcripts=FBgn0037070.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16499423	16500804	.	+	.	ID=FBgn0037070.1.mrna1;geneID=FBgn0037070.1.path1;Name=FBgn0037070.1;Dir=sensecoverage=100.0;identity=99.8;matches=1054;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006119
Chr1	stalkie_big_nohaplotig	exon	16499423	16499449	100	+	.	Parent=FBgn0037070.1.mrna1;Target=FBgn0037070.1 1 27 +
Chr1	stalkie_big_nohaplotig	exon	16499720	16499830	100	+	.	Parent=FBgn0037070.1.mrna1;Target=FBgn0037070.1 28 138 +
Chr1	stalkie_big_nohaplotig	exon	16499887	16500804	99	+	.	Parent=FBgn0037070.1.mrna1;Target=FBgn0037070.1 139 1056 +
Chr1	stalkie_big_nohaplotig	CDS	16499423	16499449	.	+	0	Parent=FBgn0037070.1.mrna1;Target=FBgn0037070.1 1 27 +
Chr1	stalkie_big_nohaplotig	CDS	16499720	16499830	.	+	0	Parent=FBgn0037070.1.mrna1;Target=FBgn0037070.1 28 138 +
Chr1	stalkie_big_nohaplotig	CDS	16499887	16500804	.	+	0	Parent=FBgn0037070.1.mrna1;Target=FBgn0037070.1 139 1056 +
Chr1	gffcl	locus	16517030	16522209	.	-	.	ID=RLOC_00006120;geneIDs=FBgn0000551.2.path1;transcripts=FBgn0000551.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16517030	16522209	.	-	.	ID=FBgn0000551.2.mrna1;geneID=FBgn0000551.2.path1;Name=FBgn0000551.2;Dir=sensecoverage=100.0;identity=98.7;matches=391;mismatches=5;indels=0;unknowns=0;locus=RLOC_00006120
Chr1	stalkie_big_nohaplotig	exon	16517030	16517377	98	-	.	Parent=FBgn0000551.2.mrna1;Target=FBgn0000551.2 49 396 +
Chr1	stalkie_big_nohaplotig	exon	16522162	16522209	100	-	.	Parent=FBgn0000551.2.mrna1;Target=FBgn0000551.2 1 48 +
Chr1	stalkie_big_nohaplotig	CDS	16517030	16517377	.	-	0	Parent=FBgn0000551.2.mrna1;Target=FBgn0000551.2 49 396 +
Chr1	stalkie_big_nohaplotig	CDS	16522162	16522209	.	-	0	Parent=FBgn0000551.2.mrna1;Target=FBgn0000551.2 1 48 +
Chr1	gffcl	locus	16535459	16536017	.	+	.	ID=RLOC_00006121;geneIDs=FBgn0000551.1.path1;transcripts=FBgn0000551.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16535459	16536017	.	+	.	ID=FBgn0000551.1.mrna1;geneID=FBgn0000551.1.path1;Name=FBgn0000551.1;Dir=sensecoverage=100.0;identity=100.0;matches=372;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006121
Chr1	stalkie_big_nohaplotig	exon	16535459	16535479	100	+	.	Parent=FBgn0000551.1.mrna1;Target=FBgn0000551.1 1 21 +
Chr1	stalkie_big_nohaplotig	exon	16535667	16536017	100	+	.	Parent=FBgn0000551.1.mrna1;Target=FBgn0000551.1 22 372 +
Chr1	stalkie_big_nohaplotig	CDS	16535459	16535479	.	+	0	Parent=FBgn0000551.1.mrna1;Target=FBgn0000551.1 1 21 +
Chr1	stalkie_big_nohaplotig	CDS	16535667	16536017	.	+	0	Parent=FBgn0000551.1.mrna1;Target=FBgn0000551.1 22 372 +
Chr1	gffcl	locus	16544817	16545369	.	+	.	ID=RLOC_00006122;geneIDs=FBgn0037068.1.path1;transcripts=FBgn0037068.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16544817	16545369	.	+	.	ID=FBgn0037068.1.mrna1;geneID=FBgn0037068.1.path1;Name=FBgn0037068.1;Dir=sensecoverage=100.0;identity=99.8;matches=464;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006122
Chr1	stalkie_big_nohaplotig	exon	16544817	16544885	100	+	.	Parent=FBgn0037068.1.mrna1;Target=FBgn0037068.1 1 69 +
Chr1	stalkie_big_nohaplotig	exon	16544974	16545369	99	+	.	Parent=FBgn0037068.1.mrna1;Target=FBgn0037068.1 70 465 +
Chr1	stalkie_big_nohaplotig	CDS	16544817	16544885	.	+	0	Parent=FBgn0037068.1.mrna1;Target=FBgn0037068.1 1 69 +
Chr1	stalkie_big_nohaplotig	CDS	16544974	16545369	.	+	0	Parent=FBgn0037068.1.mrna1;Target=FBgn0037068.1 70 465 +
Chr1	gffcl	locus	16578004	16578633	.	-	.	ID=RLOC_00006123;geneIDs=comp142514_c0_seq1.path1;transcripts=comp142514_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16578004	16578633	.	-	.	ID=comp142514_c0_seq1.mrna1;geneID=comp142514_c0_seq1.path1;Name=comp142514_c0_seq1;Dir=sensecoverage=69.6;identity=82.1;matches=529;mismatches=25;indels=90;unknowns=0;Target=comp142514_c0_seq1 1 144 +;locus=RLOC_00006123
Chr1	stalkie_big_nohaplotig	exon	16578004	16578267	70	-	.	Parent=comp142514_c0_seq1.mrna1;Target=comp142514_c0_seq1 303 643 +
Chr1	stalkie_big_nohaplotig	exon	16578343	16578633	95	-	.	Parent=comp142514_c0_seq1.mrna1;Target=comp142514_c0_seq1 1 302 +
Chr1	stalkie_big_nohaplotig	CDS	16578490	16578633	.	-	0	Parent=comp142514_c0_seq1.mrna1
Chr1	gffcl	locus	16607716	16608189	.	+	.	ID=RLOC_00006124;geneIDs=comp109739_c0_seq1.path1;transcripts=comp109739_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16607716	16608189	.	+	.	ID=comp109739_c0_seq1.mrna1;geneID=comp109739_c0_seq1.path1;Name=comp109739_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=472;mismatches=2;indels=0;unknowns=0;Target=comp109739_c0_seq1 474 1 .;CDS_Target=comp109739_c0_seq1 244 77 .;locus=RLOC_00006124
Chr1	stalkie_big_nohaplotig	exon	16607716	16608189	99	+	.	Parent=comp109739_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16607792	16607959	.	+	0	Parent=comp109739_c0_seq1.mrna1
Chr1	gffcl	locus	16618574	16618987	.	-	.	ID=RLOC_00006125;geneIDs=comp115250_c0_seq1.path1;transcripts=comp115250_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16618574	16618987	.	-	.	ID=comp115250_c0_seq1.mrna1;geneID=comp115250_c0_seq1.path1;Name=comp115250_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=410;mismatches=4;indels=1;unknowns=0;Target=comp115250_c0_seq1 415 1 .;CDS_Target=comp115250_c0_seq1 329 105 .;locus=RLOC_00006125
Chr1	stalkie_big_nohaplotig	exon	16618574	16618987	98	-	.	Parent=comp115250_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16618659	16618883	.	-	0	Parent=comp115250_c0_seq1.mrna1
Chr1	gffcl	locus	16641121	16641434	.	+	.	ID=RLOC_00006126;geneIDs=comp144586_c0_seq1.path1;transcripts=comp144586_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16641121	16641434	.	+	.	ID=comp144586_c0_seq1.mrna1;geneID=comp144586_c0_seq1.path1;Name=comp144586_c0_seq1;Dir=indeterminatecoverage=89.0;identity=99.7;matches=313;mismatches=1;indels=0;unknowns=0;Target=comp144586_c0_seq1 334 21 .;CDS_Target=comp144586_c0_seq1 313 104 .;locus=RLOC_00006126
Chr1	stalkie_big_nohaplotig	exon	16641121	16641434	99	+	.	Parent=comp144586_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16641204	16641413	.	+	0	Parent=comp144586_c0_seq1.mrna1
Chr1	gffcl	locus	16645609	16648015	.	-	.	ID=RLOC_00006127;geneIDs=FBgn0263605.1.path1;transcripts=FBgn0263605.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16645609	16648015	.	-	.	ID=FBgn0263605.1.mrna1;geneID=FBgn0263605.1.path1;Name=FBgn0263605.1;Dir=sensecoverage=100.0;identity=99.3;matches=2211;mismatches=15;indels=0;unknowns=0;locus=RLOC_00006127
Chr1	stalkie_big_nohaplotig	exon	16645609	16645725	99	-	.	Parent=FBgn0263605.1.mrna1;Target=FBgn0263605.1 2110 2226 +
Chr1	stalkie_big_nohaplotig	exon	16645790	16646788	98	-	.	Parent=FBgn0263605.1.mrna1;Target=FBgn0263605.1 1111 2109 +
Chr1	stalkie_big_nohaplotig	exon	16646846	16647713	99	-	.	Parent=FBgn0263605.1.mrna1;Target=FBgn0263605.1 243 1110 +
Chr1	stalkie_big_nohaplotig	exon	16647774	16648015	99	-	.	Parent=FBgn0263605.1.mrna1;Target=FBgn0263605.1 1 242 +
Chr1	stalkie_big_nohaplotig	CDS	16645609	16645725	.	-	0	Parent=FBgn0263605.1.mrna1;Target=FBgn0263605.1 2110 2226 +
Chr1	stalkie_big_nohaplotig	CDS	16645790	16646788	.	-	0	Parent=FBgn0263605.1.mrna1;Target=FBgn0263605.1 1111 2109 +
Chr1	stalkie_big_nohaplotig	CDS	16646846	16647713	.	-	1	Parent=FBgn0263605.1.mrna1;Target=FBgn0263605.1 243 1110 +
Chr1	stalkie_big_nohaplotig	CDS	16647774	16648015	.	-	0	Parent=FBgn0263605.1.mrna1;Target=FBgn0263605.1 1 242 +
Chr1	gffcl	locus	16649575	16651353	.	+	.	ID=RLOC_00006128;geneIDs=FBgn0035890.1.path1;transcripts=FBgn0035890.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16649575	16651353	.	+	.	ID=FBgn0035890.1.mrna1;geneID=FBgn0035890.1.path1;Name=FBgn0035890.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1777;mismatches=2;indels=0;unknowns=0;Target=FBgn0035890.1 1779 1 .;locus=RLOC_00006128
Chr1	stalkie_big_nohaplotig	exon	16649575	16651353	99	+	.	Parent=FBgn0035890.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16649575	16651353	.	+	0	Parent=FBgn0035890.1.mrna1
Chr1	gffcl	locus	16653572	16659517	.	-	.	ID=RLOC_00006129;geneIDs=FBgn0035891.1.path1;transcripts=FBgn0035891.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16653572	16659517	.	-	.	ID=FBgn0035891.1.mrna1;geneID=FBgn0035891.1.path1;Name=FBgn0035891.1;Dir=sensecoverage=100.0;identity=99.7;matches=3555;mismatches=12;indels=0;unknowns=0;locus=RLOC_00006129
Chr1	stalkie_big_nohaplotig	exon	16653572	16653664	100	-	.	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 3475 3567 +
Chr1	stalkie_big_nohaplotig	exon	16653815	16653979	100	-	.	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 3310 3474 +
Chr1	stalkie_big_nohaplotig	exon	16654041	16654153	100	-	.	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 3197 3309 +
Chr1	stalkie_big_nohaplotig	exon	16654213	16654369	100	-	.	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 3040 3196 +
Chr1	stalkie_big_nohaplotig	exon	16654435	16654555	99	-	.	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 2919 3039 +
Chr1	stalkie_big_nohaplotig	exon	16654697	16654897	100	-	.	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 2718 2918 +
Chr1	stalkie_big_nohaplotig	exon	16654959	16655106	100	-	.	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 2570 2717 +
Chr1	stalkie_big_nohaplotig	exon	16655228	16655502	99	-	.	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 2295 2569 +
Chr1	stalkie_big_nohaplotig	exon	16655582	16656064	98	-	.	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 1812 2294 +
Chr1	stalkie_big_nohaplotig	exon	16656141	16656385	100	-	.	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 1567 1811 +
Chr1	stalkie_big_nohaplotig	exon	16657543	16657707	99	-	.	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 1402 1566 +
Chr1	stalkie_big_nohaplotig	exon	16657768	16658601	99	-	.	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 568 1401 +
Chr1	stalkie_big_nohaplotig	exon	16658679	16658771	100	-	.	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 475 567 +
Chr1	stalkie_big_nohaplotig	exon	16658822	16658939	100	-	.	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 357 474 +
Chr1	stalkie_big_nohaplotig	exon	16659100	16659330	99	-	.	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 126 356 +
Chr1	stalkie_big_nohaplotig	exon	16659393	16659517	100	-	.	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 1 125 +
Chr1	stalkie_big_nohaplotig	CDS	16653572	16653664	.	-	0	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 3475 3567 +
Chr1	stalkie_big_nohaplotig	CDS	16653815	16653979	.	-	0	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 3310 3474 +
Chr1	stalkie_big_nohaplotig	CDS	16654041	16654153	.	-	2	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 3197 3309 +
Chr1	stalkie_big_nohaplotig	CDS	16654213	16654369	.	-	0	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 3040 3196 +
Chr1	stalkie_big_nohaplotig	CDS	16654435	16654555	.	-	1	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 2919 3039 +
Chr1	stalkie_big_nohaplotig	CDS	16654697	16654897	.	-	1	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 2718 2918 +
Chr1	stalkie_big_nohaplotig	CDS	16654959	16655106	.	-	2	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 2570 2717 +
Chr1	stalkie_big_nohaplotig	CDS	16655228	16655502	.	-	1	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 2295 2569 +
Chr1	stalkie_big_nohaplotig	CDS	16655582	16656064	.	-	1	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 1812 2294 +
Chr1	stalkie_big_nohaplotig	CDS	16656141	16656385	.	-	0	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 1567 1811 +
Chr1	stalkie_big_nohaplotig	CDS	16657543	16657707	.	-	0	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 1402 1566 +
Chr1	stalkie_big_nohaplotig	CDS	16657768	16658601	.	-	0	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 568 1401 +
Chr1	stalkie_big_nohaplotig	CDS	16658679	16658771	.	-	0	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 475 567 +
Chr1	stalkie_big_nohaplotig	CDS	16658822	16658939	.	-	1	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 357 474 +
Chr1	stalkie_big_nohaplotig	CDS	16659100	16659330	.	-	1	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 126 356 +
Chr1	stalkie_big_nohaplotig	CDS	16659393	16659517	.	-	0	Parent=FBgn0035891.1.mrna1;Target=FBgn0035891.1 1 125 +
Chr1	gffcl	locus	16661461	16666851	.	+	.	ID=RLOC_00006130;geneIDs=FBgn0259785.1.path1,comp118492_c0_seq1.path1;transcripts=comp118492_c0_seq1.mrna1,FBgn0259785.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16661461	16663685	.	+	.	ID=comp118492_c0_seq1.mrna1;geneID=comp118492_c0_seq1.path1;Name=comp118492_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=519;mismatches=2;indels=0;unknowns=0;Target=comp118492_c0_seq1 181 279 .;locus=RLOC_00006130
Chr1	stalkie_big_nohaplotig	exon	16661461	16661953	100	+	.	Parent=comp118492_c0_seq1.mrna1;Target=comp118492_c0_seq1 29 521 -
Chr1	stalkie_big_nohaplotig	exon	16663658	16663685	92	+	.	Parent=comp118492_c0_seq1.mrna1;Target=comp118492_c0_seq1 1 28 -
Chr1	stalkie_big_nohaplotig	CDS	16661703	16661801	.	+	0	Parent=comp118492_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16661466	16666851	.	+	.	ID=FBgn0259785.1.mrna1;geneID=FBgn0259785.1.path1;Name=FBgn0259785.1;Dir=sensecoverage=100.0;identity=99.8;matches=3069;mismatches=5;indels=1;unknowns=0;locus=RLOC_00006130
Chr1	stalkie_big_nohaplotig	exon	16661466	16661484	100	+	.	Parent=FBgn0259785.1.mrna1;Target=FBgn0259785.1 1 19 +
Chr1	stalkie_big_nohaplotig	exon	16663658	16664343	99	+	.	Parent=FBgn0259785.1.mrna1;Target=FBgn0259785.1 20 706 +
Chr1	stalkie_big_nohaplotig	exon	16664412	16665784	99	+	.	Parent=FBgn0259785.1.mrna1;Target=FBgn0259785.1 707 2079 +
Chr1	stalkie_big_nohaplotig	exon	16665856	16666851	99	+	.	Parent=FBgn0259785.1.mrna1;Target=FBgn0259785.1 2080 3075 +
Chr1	stalkie_big_nohaplotig	CDS	16663761	16664343	.	+	0	Parent=FBgn0259785.1.mrna1;Target=FBgn0259785.1 124 706 +
Chr1	stalkie_big_nohaplotig	CDS	16664412	16665784	.	+	2	Parent=FBgn0259785.1.mrna1;Target=FBgn0259785.1 707 2079 +
Chr1	stalkie_big_nohaplotig	CDS	16665856	16666851	.	+	0	Parent=FBgn0259785.1.mrna1;Target=FBgn0259785.1 2080 3075 +
Chr1	gffcl	locus	16677907	16678525	.	-	.	ID=RLOC_00006131;geneIDs=FBgn0037067.1.path1;transcripts=FBgn0037067.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16677907	16678525	.	-	.	ID=FBgn0037067.1.mrna1;geneID=FBgn0037067.1.path1;Name=FBgn0037067.1;Dir=sensecoverage=96.7;identity=99.2;matches=489;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006131
Chr1	stalkie_big_nohaplotig	exon	16677907	16678278	98	-	.	Parent=FBgn0037067.1.mrna1;Target=FBgn0037067.1 139 510 +
Chr1	stalkie_big_nohaplotig	exon	16678405	16678525	100	-	.	Parent=FBgn0037067.1.mrna1;Target=FBgn0037067.1 18 138 +
Chr1	stalkie_big_nohaplotig	CDS	16677907	16678278	.	-	0	Parent=FBgn0037067.1.mrna1;Target=FBgn0037067.1 139 510 +
Chr1	stalkie_big_nohaplotig	CDS	16678405	16678524	.	-	0	Parent=FBgn0037067.1.mrna1;Target=FBgn0037067.1 19 138 +
Chr1	gffcl	locus	16693107	16693659	.	-	.	ID=RLOC_00006132;geneIDs=FBgn0037068.1.path2;transcripts=FBgn0037068.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	16693107	16693659	.	-	.	ID=FBgn0037068.1.mrna2;geneID=FBgn0037068.1.path2;Name=FBgn0037068.1;Dir=sensecoverage=100.0;identity=99.8;matches=464;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006132
Chr1	stalkie_big_nohaplotig	exon	16693107	16693502	99	-	.	Parent=FBgn0037068.1.mrna2;Target=FBgn0037068.1 70 465 +
Chr1	stalkie_big_nohaplotig	exon	16693591	16693659	100	-	.	Parent=FBgn0037068.1.mrna2;Target=FBgn0037068.1 1 69 +
Chr1	stalkie_big_nohaplotig	CDS	16693107	16693502	.	-	0	Parent=FBgn0037068.1.mrna2;Target=FBgn0037068.1 70 465 +
Chr1	stalkie_big_nohaplotig	CDS	16693591	16693659	.	-	0	Parent=FBgn0037068.1.mrna2;Target=FBgn0037068.1 1 69 +
Chr1	gffcl	locus	16735831	16737964	.	.	.	ID=RLOC_00006133;geneIDs=Dp_FBgn0249247.9.path1,comp162761_c1_seq1.path1;transcripts=comp162761_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16735831	16737964	.	+	.	ID=comp162761_c1_seq1.mrna1;geneID=comp162761_c1_seq1.path1;Name=comp162761_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2132;mismatches=2;indels=0;unknowns=0;Target=comp162761_c1_seq1 2134 1 .;CDS_Target=comp162761_c1_seq1 1327 1136 .;locus=RLOC_00006133
Chr1	stalkie_big_nohaplotig	exon	16735831	16737964	99	+	.	Parent=comp162761_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16736966	16737157	.	+	0	Parent=comp162761_c1_seq1.mrna1
Chr1	gffcl	locus	16776337	16776792	.	-	.	ID=RLOC_00006134;geneIDs=comp148111_c0_seq1.path1;transcripts=comp148111_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16776337	16776792	.	-	.	ID=comp148111_c0_seq1.mrna1;geneID=comp148111_c0_seq1.path1;Name=comp148111_c0_seq1;Dir=indeterminatecoverage=85.9;identity=99.4;matches=355;mismatches=1;indels=1;unknowns=100;Target=comp148111_c0_seq1 532 76 .;CDS_Target=comp148111_c0_seq1 80 78 .;locus=RLOC_00006134
Chr1	stalkie_big_nohaplotig	exon	16776337	16776792	99	-	.	Parent=comp148111_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16776788	16776790	.	-	0	Parent=comp148111_c0_seq1.mrna1
Chr1	gffcl	locus	16836997	16856212	.	+	.	ID=RLOC_00006135;geneIDs=FBgn0036576.1.path1;transcripts=FBgn0036576.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16836997	16856212	.	+	.	ID=FBgn0036576.1.mrna1;geneID=FBgn0036576.1.path1;Name=FBgn0036576.1;Dir=sensecoverage=97.8;identity=99.9;matches=1672;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006135
Chr1	stalkie_big_nohaplotig	exon	16836997	16837187	100	+	.	Parent=FBgn0036576.1.mrna1;Target=FBgn0036576.1 38 228 +
Chr1	stalkie_big_nohaplotig	exon	16854579	16854667	100	+	.	Parent=FBgn0036576.1.mrna1;Target=FBgn0036576.1 229 317 +
Chr1	stalkie_big_nohaplotig	exon	16854738	16855317	100	+	.	Parent=FBgn0036576.1.mrna1;Target=FBgn0036576.1 318 897 +
Chr1	stalkie_big_nohaplotig	exon	16855400	16856212	99	+	.	Parent=FBgn0036576.1.mrna1;Target=FBgn0036576.1 898 1710 +
Chr1	stalkie_big_nohaplotig	CDS	16836999	16837187	.	+	0	Parent=FBgn0036576.1.mrna1;Target=FBgn0036576.1 40 228 +
Chr1	stalkie_big_nohaplotig	CDS	16854579	16854667	.	+	0	Parent=FBgn0036576.1.mrna1;Target=FBgn0036576.1 229 317 +
Chr1	stalkie_big_nohaplotig	CDS	16854738	16855317	.	+	1	Parent=FBgn0036576.1.mrna1;Target=FBgn0036576.1 318 897 +
Chr1	stalkie_big_nohaplotig	CDS	16855400	16856212	.	+	0	Parent=FBgn0036576.1.mrna1;Target=FBgn0036576.1 898 1710 +
Chr1	gffcl	locus	16857692	16858566	.	+	.	ID=RLOC_00006136;geneIDs=comp147277_c0_seq1.path1;transcripts=comp147277_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16857692	16858566	.	+	.	ID=comp147277_c0_seq1.mrna1;geneID=comp147277_c0_seq1.path1;Name=comp147277_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=875;mismatches=0;indels=0;unknowns=0;Target=comp147277_c0_seq1 875 1 .;CDS_Target=comp147277_c0_seq1 618 502 .;locus=RLOC_00006136
Chr1	stalkie_big_nohaplotig	exon	16857692	16858566	100	+	.	Parent=comp147277_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16858193	16858309	.	+	0	Parent=comp147277_c0_seq1.mrna1
Chr1	gffcl	locus	16858570	16859835	.	+	.	ID=RLOC_00006137;geneIDs=comp158935_c0_seq1.path1;transcripts=comp158935_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16858570	16859835	.	+	.	ID=comp158935_c0_seq1.mrna1;geneID=comp158935_c0_seq1.path1;Name=comp158935_c0_seq1;Dir=indeterminatecoverage=99.8;identity=96.2;matches=1247;mismatches=19;indels=30;unknowns=0;Target=comp158935_c0_seq1 1298 3 .;CDS_Target=comp158935_c0_seq1 1216 1013 .;locus=RLOC_00006137
Chr1	stalkie_big_nohaplotig	exon	16858570	16859835	96	+	.	Parent=comp158935_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16859550	16859753	.	+	0	Parent=comp158935_c0_seq1.mrna1
Chr1	gffcl	locus	16859897	16859945	.	-	.	ID=RLOC_00006138;geneIDs=comp144882_c0_seq1.path1;transcripts=comp144882_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16859897	16859945	.	-	.	ID=comp144882_c0_seq1.mrna1;geneID=comp144882_c0_seq1.path1;Name=comp144882_c0_seq1;Dir=indeterminatecoverage=11.7;identity=93.9;matches=46;mismatches=3;indels=0;unknowns=0;Target=comp144882_c0_seq1 420 372 .;CDS_Target=comp144882_c0_seq1 418 374 .;locus=RLOC_00006138
Chr1	stalkie_big_nohaplotig	exon	16859897	16859945	93	-	.	Parent=comp144882_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16859899	16859943	.	-	0	Parent=comp144882_c0_seq1.mrna1
Chr1	gffcl	locus	16860830	16861304	.	-	.	ID=RLOC_00006139;geneIDs=comp156626_c0_seq1.path1;transcripts=comp156626_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16860830	16861304	.	-	.	ID=comp156626_c0_seq1.mrna1;geneID=comp156626_c0_seq1.path1;Name=comp156626_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.5;matches=472;mismatches=3;indels=4;unknowns=0;Target=comp156626_c0_seq1 481 3 .;CDS_Target=comp156626_c0_seq1 239 165 .;locus=RLOC_00006139
Chr1	stalkie_big_nohaplotig	exon	16860830	16861304	98	-	.	Parent=comp156626_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16861070	16861144	.	-	0	Parent=comp156626_c0_seq1.mrna1
Chr1	gffcl	locus	16863711	16864407	.	-	.	ID=RLOC_00006140;geneIDs=comp149788_c0_seq1.path1;transcripts=comp149788_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16863711	16864407	.	-	.	ID=comp149788_c0_seq1.mrna1;geneID=comp149788_c0_seq1.path1;Name=comp149788_c0_seq1;Dir=indeterminatecoverage=99.7;identity=92.1;matches=642;mismatches=27;indels=28;unknowns=0;Target=comp149788_c0_seq1 669 1 .;CDS_Target=comp149788_c0_seq1 579 472 .;locus=RLOC_00006140
Chr1	stalkie_big_nohaplotig	exon	16863711	16864407	92	-	.	Parent=comp149788_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16863801	16863908	.	-	0	Parent=comp149788_c0_seq1.mrna1
Chr1	gffcl	locus	16865481	16865786	.	-	.	ID=RLOC_00006141;geneIDs=comp73129_c0_seq1.path1;transcripts=comp73129_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16865481	16865786	.	-	.	ID=comp73129_c0_seq1.mrna1;geneID=comp73129_c0_seq1.path1;Name=comp73129_c0_seq1;Dir=indeterminatecoverage=91.3;identity=97.7;matches=300;mismatches=5;indels=2;unknowns=0;Target=comp73129_c0_seq1 314 9 .;CDS_Target=comp73129_c0_seq1 65 9 .;locus=RLOC_00006141
Chr1	stalkie_big_nohaplotig	exon	16865481	16865786	97	-	.	Parent=comp73129_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16865731	16865786	.	-	0	Parent=comp73129_c0_seq1.mrna1
Chr1	gffcl	locus	16867257	16868411	.	-	.	ID=RLOC_00006142;geneIDs=Dp_FBgn0244687.1.path1;transcripts=Dp_FBgn0244687.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16867257	16868411	.	-	.	ID=Dp_FBgn0244687.1.mrna1;geneID=Dp_FBgn0244687.1.path1;Name=Dp_FBgn0244687.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1148;mismatches=7;indels=0;unknowns=0;Target=Dp_FBgn0244687.1 1155 1 .;locus=RLOC_00006142
Chr1	stalkie_big_nohaplotig	exon	16867257	16868411	99	-	.	Parent=Dp_FBgn0244687.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16867257	16868411	.	-	0	Parent=Dp_FBgn0244687.1.mrna1
Chr1	gffcl	locus	16876781	16878019	.	+	.	ID=RLOC_00006143;geneIDs=comp161259_c0_seq1.path1;transcripts=comp161259_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16876781	16878019	.	+	.	ID=comp161259_c0_seq1.mrna1;geneID=comp161259_c0_seq1.path1;Name=comp161259_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.9;matches=1238;mismatches=1;indels=0;unknowns=0;Target=comp161259_c0_seq1 1259 21 .;CDS_Target=comp161259_c0_seq1 138 22 .;locus=RLOC_00006143
Chr1	stalkie_big_nohaplotig	exon	16876781	16878019	99	+	.	Parent=comp161259_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16876782	16876898	.	+	0	Parent=comp161259_c0_seq1.mrna1
Chr1	gffcl	locus	16891161	17220342	.	+	.	ID=RLOC_00006144;geneIDs=FBgn0004373.1.path1,FBgn0259743.1.path1,comp119268_c0_seq1.path1;transcripts=FBgn0004373.1.mrna1,comp119268_c0_seq1.mrna1,FBgn0259743.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16891161	17220342	.	+	.	ID=FBgn0004373.1.mrna1;geneID=FBgn0004373.1.path1;Name=FBgn0004373.1;Dir=sensecoverage=86.9;identity=98.1;matches=4198;mismatches=60;indels=20;unknowns=0;locus=RLOC_00006144
Chr1	stalkie_big_nohaplotig	exon	16891161	16891173	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 691 703 +
Chr1	stalkie_big_nohaplotig	exon	16893907	16893914	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 724 731 +
Chr1	stalkie_big_nohaplotig	exon	16899409	16899417	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 732 740 +
Chr1	stalkie_big_nohaplotig	exon	16906582	16906636	65	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 832 880 +
Chr1	stalkie_big_nohaplotig	exon	16929736	16929742	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 945 951 +
Chr1	stalkie_big_nohaplotig	exon	16944107	16944113	71	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 952 958 +
Chr1	stalkie_big_nohaplotig	exon	16950333	16950339	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 959 965 +
Chr1	stalkie_big_nohaplotig	exon	16960373	16960384	75	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 966 976 +
Chr1	stalkie_big_nohaplotig	exon	16976585	16976595	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 977 987 +
Chr1	stalkie_big_nohaplotig	exon	16976606	16976614	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1035 1043 +
Chr1	stalkie_big_nohaplotig	exon	17004563	17004577	86	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1069 1083 +
Chr1	stalkie_big_nohaplotig	exon	17005895	17005902	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1084 1091 +
Chr1	stalkie_big_nohaplotig	exon	17012022	17012024	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1092 1094 +
Chr1	stalkie_big_nohaplotig	exon	17051598	17051600	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1095 1097 +
Chr1	stalkie_big_nohaplotig	exon	17059693	17059702	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1098 1107 +
Chr1	stalkie_big_nohaplotig	exon	17091213	17091218	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1108 1113 +
Chr1	stalkie_big_nohaplotig	exon	17097403	17097417	93	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1114 1128 +
Chr1	stalkie_big_nohaplotig	exon	17103577	17103584	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1129 1136 +
Chr1	stalkie_big_nohaplotig	exon	17106434	17106435	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1137 1138 +
Chr1	stalkie_big_nohaplotig	exon	17114561	17114563	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1139 1141 +
Chr1	stalkie_big_nohaplotig	exon	17124028	17124035	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1142 1149 +
Chr1	stalkie_big_nohaplotig	exon	17137276	17137287	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1168 1179 +
Chr1	stalkie_big_nohaplotig	exon	17148348	17148354	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1207 1213 +
Chr1	stalkie_big_nohaplotig	exon	17152563	17152568	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1214 1219 +
Chr1	stalkie_big_nohaplotig	exon	17158909	17158914	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1220 1225 +
Chr1	stalkie_big_nohaplotig	exon	17165214	17165226	92	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1226 1238 +
Chr1	stalkie_big_nohaplotig	exon	17179126	17179166	46	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1239 1275 +
Chr1	stalkie_big_nohaplotig	exon	17185712	17185719	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1281 1288 +
Chr1	stalkie_big_nohaplotig	exon	17189942	17190001	66	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1313 1363 +
Chr1	stalkie_big_nohaplotig	exon	17213467	17213578	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1380 1491 +
Chr1	stalkie_big_nohaplotig	exon	17215217	17215397	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1492 1672 +
Chr1	stalkie_big_nohaplotig	exon	17215647	17215838	98	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1673 1864 +
Chr1	stalkie_big_nohaplotig	exon	17216118	17217826	99	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1865 3573 +
Chr1	stalkie_big_nohaplotig	exon	17217892	17218624	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 3574 4306 +
Chr1	stalkie_big_nohaplotig	exon	17218696	17218814	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 4307 4425 +
Chr1	stalkie_big_nohaplotig	exon	17218877	17219014	100	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 4426 4563 +
Chr1	stalkie_big_nohaplotig	exon	17219419	17219693	99	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 4564 4838 +
Chr1	stalkie_big_nohaplotig	exon	17219776	17219864	98	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 4839 4927 +
Chr1	stalkie_big_nohaplotig	exon	17219929	17220093	99	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 4928 5092 +
Chr1	stalkie_big_nohaplotig	exon	17220158	17220342	98	+	.	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 5093 5277 +
Chr1	stalkie_big_nohaplotig	CDS	17213471	17213578	.	+	0	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1384 1491 +
Chr1	stalkie_big_nohaplotig	CDS	17215217	17215397	.	+	0	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1492 1672 +
Chr1	stalkie_big_nohaplotig	CDS	17215647	17215838	.	+	2	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1673 1864 +
Chr1	stalkie_big_nohaplotig	CDS	17216118	17217826	.	+	2	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 1865 3573 +
Chr1	stalkie_big_nohaplotig	CDS	17217892	17218624	.	+	0	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 3574 4306 +
Chr1	stalkie_big_nohaplotig	CDS	17218696	17218814	.	+	2	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 4307 4425 +
Chr1	stalkie_big_nohaplotig	CDS	17218877	17219014	.	+	0	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 4426 4563 +
Chr1	stalkie_big_nohaplotig	CDS	17219419	17219693	.	+	0	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 4564 4838 +
Chr1	stalkie_big_nohaplotig	CDS	17219776	17219864	.	+	1	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 4839 4927 +
Chr1	stalkie_big_nohaplotig	CDS	17219929	17220093	.	+	2	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 4928 5092 +
Chr1	stalkie_big_nohaplotig	CDS	17220158	17220342	.	+	2	Parent=FBgn0004373.1.mrna1;Target=FBgn0004373.1 5093 5277 +
Chr1	stalkie_big_nohaplotig	mRNA	17131016	17136978	.	+	.	ID=comp119268_c0_seq1.mrna1;geneID=comp119268_c0_seq1.path1;Name=comp119268_c0_seq1;Dir=antisensecoverage=100.0;identity=97.9;matches=664;mismatches=2;indels=12;unknowns=0;Target=comp119268_c0_seq1 266 517 .;locus=RLOC_00006144
Chr1	stalkie_big_nohaplotig	exon	17131016	17131669	97	+	.	Parent=comp119268_c0_seq1.mrna1;Target=comp119268_c0_seq1 25 666 -
Chr1	stalkie_big_nohaplotig	exon	17136955	17136978	100	+	.	Parent=comp119268_c0_seq1.mrna1;Target=comp119268_c0_seq1 1 24 -
Chr1	stalkie_big_nohaplotig	CDS	17131177	17131428	.	+	0	Parent=comp119268_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17136955	17142050	.	+	.	ID=FBgn0259743.1.mrna1;geneID=FBgn0259743.1.path1;Name=FBgn0259743.1;Dir=sensecoverage=88.5;identity=99.6;matches=2889;mismatches=12;indels=0;unknowns=0;locus=RLOC_00006144
Chr1	stalkie_big_nohaplotig	exon	17136955	17137575	100	+	.	Parent=FBgn0259743.1.mrna1;Target=FBgn0259743.1 379 999 +
Chr1	stalkie_big_nohaplotig	exon	17137735	17137939	100	+	.	Parent=FBgn0259743.1.mrna1;Target=FBgn0259743.1 1000 1204 +
Chr1	stalkie_big_nohaplotig	exon	17138002	17138046	97	+	.	Parent=FBgn0259743.1.mrna1;Target=FBgn0259743.1 1205 1249 +
Chr1	stalkie_big_nohaplotig	exon	17138296	17138899	98	+	.	Parent=FBgn0259743.1.mrna1;Target=FBgn0259743.1 1250 1853 +
Chr1	stalkie_big_nohaplotig	exon	17138966	17139128	100	+	.	Parent=FBgn0259743.1.mrna1;Target=FBgn0259743.1 1854 2016 +
Chr1	stalkie_big_nohaplotig	exon	17139191	17139297	100	+	.	Parent=FBgn0259743.1.mrna1;Target=FBgn0259743.1 2017 2123 +
Chr1	stalkie_big_nohaplotig	exon	17140835	17141091	100	+	.	Parent=FBgn0259743.1.mrna1;Target=FBgn0259743.1 2124 2380 +
Chr1	stalkie_big_nohaplotig	exon	17141152	17142050	99	+	.	Parent=FBgn0259743.1.mrna1;Target=FBgn0259743.1 2381 3279 +
Chr1	stalkie_big_nohaplotig	CDS	17136955	17137575	.	+	0	Parent=FBgn0259743.1.mrna1;Target=FBgn0259743.1 379 999 +
Chr1	stalkie_big_nohaplotig	CDS	17137735	17137939	.	+	0	Parent=FBgn0259743.1.mrna1;Target=FBgn0259743.1 1000 1204 +
Chr1	stalkie_big_nohaplotig	CDS	17138002	17138046	.	+	2	Parent=FBgn0259743.1.mrna1;Target=FBgn0259743.1 1205 1249 +
Chr1	stalkie_big_nohaplotig	CDS	17138296	17138899	.	+	2	Parent=FBgn0259743.1.mrna1;Target=FBgn0259743.1 1250 1853 +
Chr1	stalkie_big_nohaplotig	CDS	17138966	17139128	.	+	1	Parent=FBgn0259743.1.mrna1;Target=FBgn0259743.1 1854 2016 +
Chr1	stalkie_big_nohaplotig	CDS	17139191	17139297	.	+	0	Parent=FBgn0259743.1.mrna1;Target=FBgn0259743.1 2017 2123 +
Chr1	stalkie_big_nohaplotig	CDS	17140835	17141091	.	+	1	Parent=FBgn0259743.1.mrna1;Target=FBgn0259743.1 2124 2380 +
Chr1	stalkie_big_nohaplotig	CDS	17141152	17142050	.	+	2	Parent=FBgn0259743.1.mrna1;Target=FBgn0259743.1 2381 3279 +
Chr1	gffcl	locus	16998197	16999501	.	-	.	ID=RLOC_00006145;geneIDs=comp156141_c0_seq1.path1;transcripts=comp156141_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	16998197	16999501	.	-	.	ID=comp156141_c0_seq1.mrna1;geneID=comp156141_c0_seq1.path1;Name=comp156141_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.1;matches=1293;mismatches=12;indels=0;unknowns=0;Target=comp156141_c0_seq1 1305 1 .;CDS_Target=comp156141_c0_seq1 135 1 .;locus=RLOC_00006145
Chr1	stalkie_big_nohaplotig	exon	16998197	16999501	99	-	.	Parent=comp156141_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	16999367	16999501	.	-	0	Parent=comp156141_c0_seq1.mrna1
Chr1	gffcl	locus	17024712	17052331	.	+	.	ID=RLOC_00006146;geneIDs=comp1614914_c0_seq1.path1;transcripts=comp1614914_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17024712	17052331	.	+	.	ID=comp1614914_c0_seq1.mrna1;geneID=comp1614914_c0_seq1.path1;Name=comp1614914_c0_seq1;Dir=indeterminatecoverage=76.9;identity=99.8;matches=598;mismatches=1;indels=0;unknowns=0;Target=comp1614914_c0_seq1 760 653 .;locus=RLOC_00006146
Chr1	stalkie_big_nohaplotig	exon	17024712	17024718	100	+	.	Parent=comp1614914_c0_seq1.mrna1;Target=comp1614914_c0_seq1 170 164 .
Chr1	stalkie_big_nohaplotig	exon	17039739	17039745	100	+	.	Parent=comp1614914_c0_seq1.mrna1;Target=comp1614914_c0_seq1 177 171 .
Chr1	stalkie_big_nohaplotig	exon	17045656	17045662	85	+	.	Parent=comp1614914_c0_seq1.mrna1;Target=comp1614914_c0_seq1 184 178 .
Chr1	stalkie_big_nohaplotig	exon	17051754	17052331	100	+	.	Parent=comp1614914_c0_seq1.mrna1;Target=comp1614914_c0_seq1 762 185 .
Chr1	stalkie_big_nohaplotig	CDS	17052222	17052329	.	+	0	Parent=comp1614914_c0_seq1.mrna1
Chr1	gffcl	locus	17053134	17073274	.	+	.	ID=RLOC_00006147;geneIDs=FBgn0259744.path1;transcripts=FBgn0259744.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17053134	17073274	.	+	.	ID=FBgn0259744.mrna1;geneID=FBgn0259744.path1;Name=FBgn0259744;Dir=sensecoverage=99.2;identity=99.9;matches=2910;mismatches=4;indels=0;unknowns=4;locus=RLOC_00006147
Chr1	stalkie_big_nohaplotig	exon	17053134	17053500	100	+	.	Parent=FBgn0259744.mrna1;Target=FBgn0259744 4 370 +
Chr1	stalkie_big_nohaplotig	exon	17066701	17067187	99	+	.	Parent=FBgn0259744.mrna1;Target=FBgn0259744 371 857 +
Chr1	stalkie_big_nohaplotig	exon	17068101	17069120	99	+	.	Parent=FBgn0259744.mrna1;Target=FBgn0259744 858 1877 +
Chr1	stalkie_big_nohaplotig	exon	17070114	17070968	100	+	.	Parent=FBgn0259744.mrna1;Target=FBgn0259744 1878 2732 +
Chr1	stalkie_big_nohaplotig	exon	17073086	17073274	100	+	.	Parent=FBgn0259744.mrna1;Target=FBgn0259744 2733 2921 +
Chr1	stalkie_big_nohaplotig	CDS	17053134	17053500	.	+	0	Parent=FBgn0259744.mrna1;Target=FBgn0259744 4 370 +
Chr1	stalkie_big_nohaplotig	CDS	17066701	17067187	.	+	2	Parent=FBgn0259744.mrna1;Target=FBgn0259744 371 857 +
Chr1	stalkie_big_nohaplotig	CDS	17068101	17069120	.	+	1	Parent=FBgn0259744.mrna1;Target=FBgn0259744 858 1877 +
Chr1	stalkie_big_nohaplotig	CDS	17070114	17070968	.	+	1	Parent=FBgn0259744.mrna1;Target=FBgn0259744 1878 2732 +
Chr1	stalkie_big_nohaplotig	CDS	17073086	17073272	.	+	1	Parent=FBgn0259744.mrna1;Target=FBgn0259744 2733 2919 +
Chr1	gffcl	locus	17143293	17144523	.	+	.	ID=RLOC_00006149;geneIDs=comp161363_c0_seq1.path1;transcripts=comp161363_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17143293	17144523	.	+	.	ID=comp161363_c0_seq1.mrna1;geneID=comp161363_c0_seq1.path1;Name=comp161363_c0_seq1;Dir=indeterminatecoverage=99.9;identity=94.6;matches=1129;mismatches=32;indels=32;unknowns=0;Target=comp161363_c0_seq1 935 876 .;locus=RLOC_00006149
Chr1	stalkie_big_nohaplotig	exon	17143293	17144414	94	+	.	Parent=comp161363_c0_seq1.mrna1;Target=comp161363_c0_seq1 1137 2 .
Chr1	stalkie_big_nohaplotig	exon	17144476	17144523	95	+	.	Parent=comp161363_c0_seq1.mrna1;Target=comp161363_c0_seq1 1185 1138 .
Chr1	stalkie_big_nohaplotig	CDS	17144162	17144215	.	+	0	Parent=comp161363_c0_seq1.mrna1
Chr1	gffcl	locus	17144624	17145756	.	-	.	ID=RLOC_00006150;geneIDs=comp159748_c0_seq1.path1;transcripts=comp159748_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17144624	17145756	.	-	.	ID=comp159748_c0_seq1.mrna1;geneID=comp159748_c0_seq1.path1;Name=comp159748_c0_seq1;Dir=indeterminatecoverage=96.0;identity=98.8;matches=1127;mismatches=6;indels=8;unknowns=0;Target=comp159748_c0_seq1 1185 45 .;CDS_Target=comp159748_c0_seq1 298 176 .;locus=RLOC_00006150
Chr1	stalkie_big_nohaplotig	exon	17144624	17145756	98	-	.	Parent=comp159748_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	17145510	17145632	.	-	0	Parent=comp159748_c0_seq1.mrna1
Chr1	gffcl	locus	17158278	17159785	.	.	.	ID=RLOC_00006152;geneIDs=comp156095_c0_seq1.path1,comp158982_c0_seq1.path1;transcripts=comp158982_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17158793	17159785	.	-	.	ID=comp158982_c0_seq1.mrna1;geneID=comp158982_c0_seq1.path1;Name=comp158982_c0_seq1;Dir=antisensecoverage=76.5;identity=98.8;matches=851;mismatches=10;indels=0;unknowns=0;locus=RLOC_00006152
Chr1	stalkie_big_nohaplotig	exon	17158793	17159049	99	-	.	Parent=comp158982_c0_seq1.mrna1;Target=comp158982_c0_seq1 1 257 -
Chr1	stalkie_big_nohaplotig	exon	17159121	17159436	97	-	.	Parent=comp158982_c0_seq1.mrna1;Target=comp158982_c0_seq1 258 573 -
Chr1	stalkie_big_nohaplotig	exon	17159498	17159785	99	-	.	Parent=comp158982_c0_seq1.mrna1;Target=comp158982_c0_seq1 574 861 -
Chr1	stalkie_big_nohaplotig	CDS	17158920	17159049	.	-	1	Parent=comp158982_c0_seq1.mrna1;Target=comp158982_c0_seq1 128 257 .
Chr1	stalkie_big_nohaplotig	CDS	17159121	17159436	.	-	2	Parent=comp158982_c0_seq1.mrna1;Target=comp158982_c0_seq1 258 573 .
Chr1	stalkie_big_nohaplotig	CDS	17159498	17159705	.	-	0	Parent=comp158982_c0_seq1.mrna1;Target=comp158982_c0_seq1 574 781 .
Chr1	gffcl	locus	17161433	17169546	.	+	.	ID=RLOC_00006153;geneIDs=FBgn0052344.1.path1;transcripts=FBgn0052344.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17161433	17169546	.	+	.	ID=FBgn0052344.1.mrna1;geneID=FBgn0052344.1.path1;Name=FBgn0052344.1;Dir=sensecoverage=100.0;identity=99.2;matches=1845;mismatches=15;indels=0;unknowns=0;locus=RLOC_00006153
Chr1	stalkie_big_nohaplotig	exon	17161433	17161444	100	+	.	Parent=FBgn0052344.1.mrna1;Target=FBgn0052344.1 1 12 +
Chr1	stalkie_big_nohaplotig	exon	17161504	17161698	99	+	.	Parent=FBgn0052344.1.mrna1;Target=FBgn0052344.1 13 207 +
Chr1	stalkie_big_nohaplotig	exon	17161757	17162105	98	+	.	Parent=FBgn0052344.1.mrna1;Target=FBgn0052344.1 208 556 +
Chr1	stalkie_big_nohaplotig	exon	17162170	17162349	98	+	.	Parent=FBgn0052344.1.mrna1;Target=FBgn0052344.1 557 736 +
Chr1	stalkie_big_nohaplotig	exon	17162407	17162570	100	+	.	Parent=FBgn0052344.1.mrna1;Target=FBgn0052344.1 737 900 +
Chr1	stalkie_big_nohaplotig	exon	17162625	17163035	99	+	.	Parent=FBgn0052344.1.mrna1;Target=FBgn0052344.1 901 1311 +
Chr1	stalkie_big_nohaplotig	exon	17163101	17163379	98	+	.	Parent=FBgn0052344.1.mrna1;Target=FBgn0052344.1 1312 1590 +
Chr1	stalkie_big_nohaplotig	exon	17163438	17163497	100	+	.	Parent=FBgn0052344.1.mrna1;Target=FBgn0052344.1 1591 1650 +
Chr1	stalkie_big_nohaplotig	exon	17167530	17167625	100	+	.	Parent=FBgn0052344.1.mrna1;Target=FBgn0052344.1 1651 1746 +
Chr1	stalkie_big_nohaplotig	exon	17169433	17169546	100	+	.	Parent=FBgn0052344.1.mrna1;Target=FBgn0052344.1 1747 1860 +
Chr1	stalkie_big_nohaplotig	CDS	17161433	17161444	.	+	0	Parent=FBgn0052344.1.mrna1;Target=FBgn0052344.1 1 12 +
Chr1	stalkie_big_nohaplotig	CDS	17161504	17161698	.	+	0	Parent=FBgn0052344.1.mrna1;Target=FBgn0052344.1 13 207 +
Chr1	stalkie_big_nohaplotig	CDS	17161757	17162105	.	+	0	Parent=FBgn0052344.1.mrna1;Target=FBgn0052344.1 208 556 +
Chr1	stalkie_big_nohaplotig	CDS	17162170	17162349	.	+	2	Parent=FBgn0052344.1.mrna1;Target=FBgn0052344.1 557 736 +
Chr1	stalkie_big_nohaplotig	CDS	17162407	17162570	.	+	2	Parent=FBgn0052344.1.mrna1;Target=FBgn0052344.1 737 900 +
Chr1	stalkie_big_nohaplotig	CDS	17162625	17163035	.	+	0	Parent=FBgn0052344.1.mrna1;Target=FBgn0052344.1 901 1311 +
Chr1	stalkie_big_nohaplotig	CDS	17163101	17163379	.	+	0	Parent=FBgn0052344.1.mrna1;Target=FBgn0052344.1 1312 1590 +
Chr1	stalkie_big_nohaplotig	CDS	17163438	17163497	.	+	0	Parent=FBgn0052344.1.mrna1;Target=FBgn0052344.1 1591 1650 +
Chr1	stalkie_big_nohaplotig	CDS	17167530	17167625	.	+	0	Parent=FBgn0052344.1.mrna1;Target=FBgn0052344.1 1651 1746 +
Chr1	stalkie_big_nohaplotig	CDS	17169433	17169546	.	+	0	Parent=FBgn0052344.1.mrna1;Target=FBgn0052344.1 1747 1860 +
Chr1	gffcl	locus	17239128	17246007	.	+	.	ID=RLOC_00006155;geneIDs=FBgn0035111.1.path1;transcripts=FBgn0035111.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17239128	17246007	.	+	.	ID=FBgn0035111.1.mrna1;geneID=FBgn0035111.1.path1;Name=FBgn0035111.1;Dir=sensecoverage=100.0;identity=99.6;matches=3100;mismatches=14;indels=0;unknowns=0;locus=RLOC_00006155
Chr1	stalkie_big_nohaplotig	exon	17239128	17240154	99	+	.	Parent=FBgn0035111.1.mrna1;Target=FBgn0035111.1 1 1027 +
Chr1	stalkie_big_nohaplotig	exon	17240208	17241588	99	+	.	Parent=FBgn0035111.1.mrna1;Target=FBgn0035111.1 1028 2408 +
Chr1	stalkie_big_nohaplotig	exon	17241655	17241774	99	+	.	Parent=FBgn0035111.1.mrna1;Target=FBgn0035111.1 2409 2528 +
Chr1	stalkie_big_nohaplotig	exon	17242081	17242619	99	+	.	Parent=FBgn0035111.1.mrna1;Target=FBgn0035111.1 2529 3067 +
Chr1	stalkie_big_nohaplotig	exon	17245961	17246007	100	+	.	Parent=FBgn0035111.1.mrna1;Target=FBgn0035111.1 3068 3114 +
Chr1	stalkie_big_nohaplotig	CDS	17239128	17240154	.	+	0	Parent=FBgn0035111.1.mrna1;Target=FBgn0035111.1 1 1027 +
Chr1	stalkie_big_nohaplotig	CDS	17240208	17241588	.	+	2	Parent=FBgn0035111.1.mrna1;Target=FBgn0035111.1 1028 2408 +
Chr1	stalkie_big_nohaplotig	CDS	17241655	17241774	.	+	1	Parent=FBgn0035111.1.mrna1;Target=FBgn0035111.1 2409 2528 +
Chr1	stalkie_big_nohaplotig	CDS	17242081	17242619	.	+	1	Parent=FBgn0035111.1.mrna1;Target=FBgn0035111.1 2529 3067 +
Chr1	stalkie_big_nohaplotig	CDS	17245961	17246007	.	+	2	Parent=FBgn0035111.1.mrna1;Target=FBgn0035111.1 3068 3114 +
Chr1	gffcl	locus	17254177	17255453	.	+	.	ID=RLOC_00006156;geneIDs=comp155930_c0_seq1.path1;transcripts=comp155930_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17254177	17255453	.	+	.	ID=comp155930_c0_seq1.mrna1;geneID=comp155930_c0_seq1.path1;Name=comp155930_c0_seq1;Dir=sensecoverage=99.7;identity=98.8;matches=1086;mismatches=11;indels=2;unknowns=0;locus=RLOC_00006156
Chr1	stalkie_big_nohaplotig	exon	17254177	17254683	99	+	.	Parent=comp155930_c0_seq1.mrna1;Target=comp155930_c0_seq1 1 507 +
Chr1	stalkie_big_nohaplotig	exon	17254744	17255037	98	+	.	Parent=comp155930_c0_seq1.mrna1;Target=comp155930_c0_seq1 508 801 +
Chr1	stalkie_big_nohaplotig	exon	17255158	17255453	97	+	.	Parent=comp155930_c0_seq1.mrna1;Target=comp155930_c0_seq1 802 1099 +
Chr1	stalkie_big_nohaplotig	CDS	17254653	17254683	.	+	0	Parent=comp155930_c0_seq1.mrna1;Target=comp155930_c0_seq1 477 507 +
Chr1	stalkie_big_nohaplotig	CDS	17254744	17255037	.	+	2	Parent=comp155930_c0_seq1.mrna1;Target=comp155930_c0_seq1 508 801 +
Chr1	stalkie_big_nohaplotig	CDS	17255158	17255198	.	+	2	Parent=comp155930_c0_seq1.mrna1;Target=comp155930_c0_seq1 802 842 +
Chr1	gffcl	locus	17257629	17282183	.	.	.	ID=RLOC_00006157;geneIDs=FBgn0053229.1.path1,comp147139_c0_seq1.path1,comp147639_c0_seq1.path1,comp148161_c0_seq1.path1,comp152035_c0_seq1.path1,comp152035_c0_seq1.path2,comp162982_c0_seq1.path1;transcripts=comp152035_c0_seq1.mrna1,comp147639_c0_seq1.mrna1,comp147139_c0_seq1.mrna1,comp162982_c0_seq1.mrna1,FBgn0053229.1.mrna1,comp148161_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17257629	17281934	.	+	.	ID=comp152035_c0_seq1.mrna1;geneID=comp152035_c0_seq1.path1;Name=comp152035_c0_seq1;Dir=sensecoverage=84.2;identity=98.6;matches=690;mismatches=10;indels=0;unknowns=0;locus=RLOC_00006157
Chr1	stalkie_big_nohaplotig	exon	17257629	17257844	98	+	.	Parent=comp152035_c0_seq1.mrna1;Target=comp152035_c0_seq1 1 216 +
Chr1	stalkie_big_nohaplotig	exon	17257901	17258042	98	+	.	Parent=comp152035_c0_seq1.mrna1;Target=comp152035_c0_seq1 217 358 +
Chr1	stalkie_big_nohaplotig	exon	17258099	17258428	98	+	.	Parent=comp152035_c0_seq1.mrna1;Target=comp152035_c0_seq1 359 688 +
Chr1	stalkie_big_nohaplotig	exon	17259794	17259795	100	+	.	Parent=comp152035_c0_seq1.mrna1;Target=comp152035_c0_seq1 689 690 +
Chr1	stalkie_big_nohaplotig	exon	17275512	17275515	100	+	.	Parent=comp152035_c0_seq1.mrna1;Target=comp152035_c0_seq1 691 694 +
Chr1	stalkie_big_nohaplotig	exon	17281929	17281934	100	+	.	Parent=comp152035_c0_seq1.mrna1;Target=comp152035_c0_seq1 695 700 +
Chr1	stalkie_big_nohaplotig	CDS	17258012	17258042	.	+	0	Parent=comp152035_c0_seq1.mrna1;Target=comp152035_c0_seq1 328 358 +
Chr1	stalkie_big_nohaplotig	CDS	17258099	17258388	.	+	2	Parent=comp152035_c0_seq1.mrna1;Target=comp152035_c0_seq1 359 648 +
Chr1	stalkie_big_nohaplotig	mRNA	17258413	17258947	.	-	.	ID=comp147639_c0_seq1.mrna1;geneID=comp147639_c0_seq1.path1;Name=comp147639_c0_seq1;Dir=indeterminatecoverage=80.5;identity=85.0;matches=458;mismatches=26;indels=55;unknowns=0;Target=comp147639_c0_seq1 606 119 .;CDS_Target=comp147639_c0_seq1 493 431 .;locus=RLOC_00006157
Chr1	stalkie_big_nohaplotig	exon	17258413	17258947	84	-	.	Parent=comp147639_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	17258526	17258588	.	-	0	Parent=comp147639_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17259767	17260241	.	+	.	ID=comp147139_c0_seq1.mrna1;geneID=comp147139_c0_seq1.path1;Name=comp147139_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.0;matches=460;mismatches=7;indels=33;unknowns=0;Target=comp147139_c0_seq1 492 1 .;CDS_Target=comp147139_c0_seq1 84 1 .;locus=RLOC_00006157
Chr1	stalkie_big_nohaplotig	exon	17259767	17260241	92	+	.	Parent=comp147139_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	17259767	17259850	.	+	0	Parent=comp147139_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17273763	17282183	.	+	.	ID=comp162982_c0_seq1.mrna1;geneID=comp162982_c0_seq1.path1;Name=comp162982_c0_seq1;Dir=antisensecoverage=100.0;identity=98.4;matches=6169;mismatches=40;indels=61;unknowns=0;Target=comp162982_c0_seq1 4121 4387 .;locus=RLOC_00006157
Chr1	stalkie_big_nohaplotig	exon	17273763	17273832	98	+	.	Parent=comp162982_c0_seq1.mrna1;Target=comp162982_c0_seq1 6192 6261 -
Chr1	stalkie_big_nohaplotig	exon	17274391	17274528	97	+	.	Parent=comp162982_c0_seq1.mrna1;Target=comp162982_c0_seq1 6052 6191 -
Chr1	stalkie_big_nohaplotig	exon	17275072	17278160	98	+	.	Parent=comp162982_c0_seq1.mrna1;Target=comp162982_c0_seq1 2933 6051 -
Chr1	stalkie_big_nohaplotig	exon	17279263	17282183	98	+	.	Parent=comp162982_c0_seq1.mrna1;Target=comp162982_c0_seq1 1 2932 -
Chr1	stalkie_big_nohaplotig	CDS	17276720	17276981	.	+	0	Parent=comp162982_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17273815	17274297	.	+	.	ID=FBgn0053229.1.mrna1;geneID=FBgn0053229.1.path1;Name=FBgn0053229.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=481;mismatches=2;indels=0;unknowns=0;Target=FBgn0053229.1 483 1 .;locus=RLOC_00006157
Chr1	stalkie_big_nohaplotig	exon	17273815	17274297	99	+	.	Parent=FBgn0053229.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	17273815	17274297	.	+	0	Parent=FBgn0053229.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17274505	17275093	.	+	.	ID=comp148161_c0_seq1.mrna1;geneID=comp148161_c0_seq1.path1;Name=comp148161_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=408;mismatches=2;indels=0;unknowns=0;Target=comp148161_c0_seq1 198 106 .;locus=RLOC_00006157
Chr1	stalkie_big_nohaplotig	exon	17274505	17274890	99	+	.	Parent=comp148161_c0_seq1.mrna1;Target=comp148161_c0_seq1 386 1 .
Chr1	stalkie_big_nohaplotig	exon	17275070	17275093	100	+	.	Parent=comp148161_c0_seq1.mrna1;Target=comp148161_c0_seq1 410 387 .
Chr1	stalkie_big_nohaplotig	CDS	17274610	17274702	.	+	0	Parent=comp148161_c0_seq1.mrna1
Chr1	gffcl	locus	17261035	17266563	.	-	.	ID=RLOC_00006158;geneIDs=FBgn0035113.1.path1;transcripts=FBgn0035113.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17261035	17266563	.	-	.	ID=FBgn0035113.1.mrna1;geneID=FBgn0035113.1.path1;Name=FBgn0035113.1;Dir=sensecoverage=100.0;identity=99.9;matches=2865;mismatches=3;indels=0;unknowns=0;locus=RLOC_00006158
Chr1	stalkie_big_nohaplotig	exon	17261035	17261902	100	-	.	Parent=FBgn0035113.1.mrna1;Target=FBgn0035113.1 2001 2868 +
Chr1	stalkie_big_nohaplotig	exon	17261967	17262078	100	-	.	Parent=FBgn0035113.1.mrna1;Target=FBgn0035113.1 1889 2000 +
Chr1	stalkie_big_nohaplotig	exon	17262874	17263027	100	-	.	Parent=FBgn0035113.1.mrna1;Target=FBgn0035113.1 1735 1888 +
Chr1	stalkie_big_nohaplotig	exon	17263093	17263176	100	-	.	Parent=FBgn0035113.1.mrna1;Target=FBgn0035113.1 1651 1734 +
Chr1	stalkie_big_nohaplotig	exon	17263297	17263790	100	-	.	Parent=FBgn0035113.1.mrna1;Target=FBgn0035113.1 1157 1650 +
Chr1	stalkie_big_nohaplotig	exon	17263863	17264207	99	-	.	Parent=FBgn0035113.1.mrna1;Target=FBgn0035113.1 812 1156 +
Chr1	stalkie_big_nohaplotig	exon	17265493	17265782	100	-	.	Parent=FBgn0035113.1.mrna1;Target=FBgn0035113.1 522 811 +
Chr1	stalkie_big_nohaplotig	exon	17265893	17266148	100	-	.	Parent=FBgn0035113.1.mrna1;Target=FBgn0035113.1 266 521 +
Chr1	stalkie_big_nohaplotig	exon	17266225	17266465	99	-	.	Parent=FBgn0035113.1.mrna1;Target=FBgn0035113.1 25 265 +
Chr1	stalkie_big_nohaplotig	exon	17266540	17266563	100	-	.	Parent=FBgn0035113.1.mrna1;Target=FBgn0035113.1 1 24 +
Chr1	stalkie_big_nohaplotig	CDS	17261035	17261902	.	-	1	Parent=FBgn0035113.1.mrna1;Target=FBgn0035113.1 2001 2868 +
Chr1	stalkie_big_nohaplotig	CDS	17261967	17262078	.	-	2	Parent=FBgn0035113.1.mrna1;Target=FBgn0035113.1 1889 2000 +
Chr1	stalkie_big_nohaplotig	CDS	17262874	17263027	.	-	0	Parent=FBgn0035113.1.mrna1;Target=FBgn0035113.1 1735 1888 +
Chr1	stalkie_big_nohaplotig	CDS	17263093	17263176	.	-	0	Parent=FBgn0035113.1.mrna1;Target=FBgn0035113.1 1651 1734 +
Chr1	stalkie_big_nohaplotig	CDS	17263297	17263790	.	-	2	Parent=FBgn0035113.1.mrna1;Target=FBgn0035113.1 1157 1650 +
Chr1	stalkie_big_nohaplotig	CDS	17263863	17264207	.	-	2	Parent=FBgn0035113.1.mrna1;Target=FBgn0035113.1 812 1156 +
Chr1	stalkie_big_nohaplotig	CDS	17265493	17265782	.	-	1	Parent=FBgn0035113.1.mrna1;Target=FBgn0035113.1 522 811 +
Chr1	stalkie_big_nohaplotig	CDS	17265893	17266148	.	-	2	Parent=FBgn0035113.1.mrna1;Target=FBgn0035113.1 266 521 +
Chr1	stalkie_big_nohaplotig	CDS	17266225	17266465	.	-	0	Parent=FBgn0035113.1.mrna1;Target=FBgn0035113.1 25 265 +
Chr1	stalkie_big_nohaplotig	CDS	17266540	17266563	.	-	0	Parent=FBgn0035113.1.mrna1;Target=FBgn0035113.1 1 24 +
Chr1	gffcl	locus	17282411	17283615	.	+	.	ID=RLOC_00006159;geneIDs=comp160295_c0_seq1.path1;transcripts=comp160295_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17282411	17283615	.	+	.	ID=comp160295_c0_seq1.mrna1;geneID=comp160295_c0_seq1.path1;Name=comp160295_c0_seq1;Dir=indeterminatecoverage=86.9;identity=91.1;matches=1112;mismatches=91;indels=18;unknowns=0;Target=comp160295_c0_seq1 1219 1 .;CDS_Target=comp160295_c0_seq1 752 666 .;locus=RLOC_00006159
Chr1	stalkie_big_nohaplotig	exon	17282411	17283615	91	+	.	Parent=comp160295_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	17283075	17283161	.	+	0	Parent=comp160295_c0_seq1.mrna1
Chr1	gffcl	locus	17344484	17345421	.	+	.	ID=RLOC_00006160;geneIDs=comp135884_c0_seq1.path1;transcripts=comp135884_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17344484	17345421	.	+	.	ID=comp135884_c0_seq1.mrna1;geneID=comp135884_c0_seq1.path1;Name=comp135884_c0_seq1;Dir=antisensecoverage=97.7;identity=98.3;matches=875;mismatches=8;indels=7;unknowns=0;locus=RLOC_00006160
Chr1	stalkie_big_nohaplotig	exon	17344484	17344723	100	+	.	Parent=comp135884_c0_seq1.mrna1;Target=comp135884_c0_seq1 657 896 -
Chr1	stalkie_big_nohaplotig	exon	17344776	17345421	97	+	.	Parent=comp135884_c0_seq1.mrna1;Target=comp135884_c0_seq1 10 656 -
Chr1	stalkie_big_nohaplotig	CDS	17344565	17344723	.	+	0	Parent=comp135884_c0_seq1.mrna1;Target=comp135884_c0_seq1 657 815 .
Chr1	stalkie_big_nohaplotig	CDS	17344776	17344943	.	+	0	Parent=comp135884_c0_seq1.mrna1;Target=comp135884_c0_seq1 489 656 .
Chr1	gffcl	locus	17454046	17477276	.	+	.	ID=RLOC_00006161;geneIDs=FBgn0033312.2.path1,comp135605_c0_seq1.path1;transcripts=FBgn0033312.2.mrna1,comp135605_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17454046	17477276	.	+	.	ID=FBgn0033312.2.mrna1;geneID=FBgn0033312.2.path1;Name=FBgn0033312.2;Dir=indeterminatecoverage=100.0;identity=93.8;matches=610;mismatches=31;indels=9;unknowns=0;locus=RLOC_00006161
Chr1	stalkie_big_nohaplotig	exon	17454046	17454155	100	+	.	Parent=FBgn0033312.2.mrna1;Target=FBgn0033312.2 110 1 .
Chr1	stalkie_big_nohaplotig	exon	17455669	17455670	100	+	.	Parent=FBgn0033312.2.mrna1;Target=FBgn0033312.2 112 111 .
Chr1	stalkie_big_nohaplotig	exon	17460348	17460352	100	+	.	Parent=FBgn0033312.2.mrna1;Target=FBgn0033312.2 117 113 .
Chr1	stalkie_big_nohaplotig	exon	17461076	17461079	100	+	.	Parent=FBgn0033312.2.mrna1;Target=FBgn0033312.2 121 118 .
Chr1	stalkie_big_nohaplotig	exon	17466644	17466662	100	+	.	Parent=FBgn0033312.2.mrna1;Target=FBgn0033312.2 141 123 .
Chr1	stalkie_big_nohaplotig	exon	17476138	17476627	91	+	.	Parent=FBgn0033312.2.mrna1;Target=FBgn0033312.2 622 142 .
Chr1	stalkie_big_nohaplotig	exon	17477257	17477276	100	+	.	Parent=FBgn0033312.2.mrna1;Target=FBgn0033312.2 777 758 .
Chr1	stalkie_big_nohaplotig	CDS	17476408	17476627	.	+	0	Parent=FBgn0033312.2.mrna1;Target=FBgn0033312.2 622 412 .
Chr1	stalkie_big_nohaplotig	CDS	17477257	17477276	.	+	2	Parent=FBgn0033312.2.mrna1;Target=FBgn0033312.2 777 758 .
Chr1	stalkie_big_nohaplotig	mRNA	17454690	17477266	.	+	.	ID=comp135605_c0_seq1.mrna1;geneID=comp135605_c0_seq1.path1;Name=comp135605_c0_seq1;Dir=antisensecoverage=100.0;identity=90.6;matches=310;mismatches=24;indels=8;unknowns=0;locus=RLOC_00006161
Chr1	stalkie_big_nohaplotig	exon	17454690	17454856	100	+	.	Parent=comp135605_c0_seq1.mrna1;Target=comp135605_c0_seq1 172 338 -
Chr1	stalkie_big_nohaplotig	exon	17454915	17454968	100	+	.	Parent=comp135605_c0_seq1.mrna1;Target=comp135605_c0_seq1 118 171 -
Chr1	stalkie_big_nohaplotig	exon	17477150	17477266	73	+	.	Parent=comp135605_c0_seq1.mrna1;Target=comp135605_c0_seq1 1 117 -
Chr1	stalkie_big_nohaplotig	CDS	17454690	17454856	.	+	0	Parent=comp135605_c0_seq1.mrna1;Target=comp135605_c0_seq1 172 338 .
Chr1	stalkie_big_nohaplotig	CDS	17454915	17454968	.	+	1	Parent=comp135605_c0_seq1.mrna1;Target=comp135605_c0_seq1 118 171 .
Chr1	stalkie_big_nohaplotig	CDS	17477150	17477264	.	+	1	Parent=comp135605_c0_seq1.mrna1;Target=comp135605_c0_seq1 3 117 .
Chr1	gffcl	locus	17467445	17477171	.	.	.	ID=RLOC_00006162;geneIDs=comp140482_c0_seq1.path1,comp162310_c0_seq1.path1;transcripts=comp162310_c0_seq1.mrna1,comp140482_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17467445	17477171	.	-	.	ID=comp162310_c0_seq1.mrna1;geneID=comp162310_c0_seq1.path1;Name=comp162310_c0_seq1;Dir=indeterminatecoverage=100.0;identity=84.0;matches=1672;mismatches=126;indels=192;unknowns=0;Target=comp162310_c0_seq1 952 890 .;locus=RLOC_00006162
Chr1	stalkie_big_nohaplotig	exon	17467445	17468448	93	-	.	Parent=comp162310_c0_seq1.mrna1;Target=comp162310_c0_seq1 2223 1199 .
Chr1	stalkie_big_nohaplotig	exon	17468456	17468750	83	-	.	Parent=comp162310_c0_seq1.mrna1;Target=comp162310_c0_seq1 1035 730 .
Chr1	stalkie_big_nohaplotig	exon	17468930	17469230	56	-	.	Parent=comp162310_c0_seq1.mrna1;Target=comp162310_c0_seq1 716 326 .
Chr1	stalkie_big_nohaplotig	exon	17475182	17475189	100	-	.	Parent=comp162310_c0_seq1.mrna1;Target=comp162310_c0_seq1 325 318 .
Chr1	stalkie_big_nohaplotig	exon	17475434	17475440	100	-	.	Parent=comp162310_c0_seq1.mrna1;Target=comp162310_c0_seq1 317 311 .
Chr1	stalkie_big_nohaplotig	exon	17475449	17475456	100	-	.	Parent=comp162310_c0_seq1.mrna1;Target=comp162310_c0_seq1 249 242 .
Chr1	stalkie_big_nohaplotig	exon	17476168	17476175	100	-	.	Parent=comp162310_c0_seq1.mrna1;Target=comp162310_c0_seq1 211 204 .
Chr1	stalkie_big_nohaplotig	exon	17476971	17477171	89	-	.	Parent=comp162310_c0_seq1.mrna1;Target=comp162310_c0_seq1 203 1 .
Chr1	stalkie_big_nohaplotig	CDS	17468539	17468601	.	-	0	Parent=comp162310_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17476744	17477050	.	+	.	ID=comp140482_c0_seq1.mrna1;geneID=comp140482_c0_seq1.path1;Name=comp140482_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=302;mismatches=3;indels=2;unknowns=0;Target=comp140482_c0_seq1 305 1 .;CDS_Target=comp140482_c0_seq1 107 3 .;locus=RLOC_00006162
Chr1	stalkie_big_nohaplotig	exon	17476744	17477050	98	+	.	Parent=comp140482_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	17476746	17476852	.	+	0	Parent=comp140482_c0_seq1.mrna1
Chr1	gffcl	locus	17470378	17470605	.	-	.	ID=RLOC_00006163;geneIDs=comp1438535_c0_seq1.path1;transcripts=comp1438535_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17470378	17470605	.	-	.	ID=comp1438535_c0_seq1.mrna1;geneID=comp1438535_c0_seq1.path1;Name=comp1438535_c0_seq1;Dir=indeterminatecoverage=100.0;identity=82.0;matches=200;mismatches=27;indels=17;unknowns=0;Target=comp1438535_c0_seq1 243 1 .;CDS_Target=comp1438535_c0_seq1 206 45 .;locus=RLOC_00006163
Chr1	stalkie_big_nohaplotig	exon	17470378	17470605	81	-	.	Parent=comp1438535_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	17470415	17470561	.	-	0	Parent=comp1438535_c0_seq1.mrna1
Chr1	gffcl	locus	17489782	17490516	.	+	.	ID=RLOC_00006164;geneIDs=FBgn0035122.1.path1;transcripts=FBgn0035122.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17489782	17490516	.	+	.	ID=FBgn0035122.1.mrna1;geneID=FBgn0035122.1.path1;Name=FBgn0035122.1;Dir=sensecoverage=100.0;identity=99.1;matches=672;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006164
Chr1	stalkie_big_nohaplotig	exon	17489782	17489985	98	+	.	Parent=FBgn0035122.1.mrna1;Target=FBgn0035122.1 1 204 +
Chr1	stalkie_big_nohaplotig	exon	17490043	17490516	99	+	.	Parent=FBgn0035122.1.mrna1;Target=FBgn0035122.1 205 678 +
Chr1	stalkie_big_nohaplotig	CDS	17489782	17489985	.	+	0	Parent=FBgn0035122.1.mrna1;Target=FBgn0035122.1 1 204 +
Chr1	stalkie_big_nohaplotig	CDS	17490043	17490516	.	+	0	Parent=FBgn0035122.1.mrna1;Target=FBgn0035122.1 205 678 +
Chr1	gffcl	locus	17517812	17519256	.	+	.	ID=RLOC_00006166;geneIDs=comp152637_c0_seq1.path1;transcripts=comp152637_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17517812	17519256	.	+	.	ID=comp152637_c0_seq1.mrna1;geneID=comp152637_c0_seq1.path1;Name=comp152637_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=1400;mismatches=45;indels=0;unknowns=0;Target=comp152637_c0_seq1 1445 1 .;CDS_Target=comp152637_c0_seq1 853 710 .;locus=RLOC_00006166
Chr1	stalkie_big_nohaplotig	exon	17517812	17519256	96	+	.	Parent=comp152637_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	17518521	17518664	.	+	0	Parent=comp152637_c0_seq1.mrna1
Chr1	gffcl	locus	17519643	17522447	.	-	.	ID=RLOC_00006167;geneIDs=FBgn0050280.3.path1;transcripts=FBgn0050280.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17519643	17522447	.	-	.	ID=FBgn0050280.3.mrna1;geneID=FBgn0050280.3.path1;Name=FBgn0050280.3;Dir=sensecoverage=84.0;identity=96.7;matches=675;mismatches=23;indels=0;unknowns=0;locus=RLOC_00006167
Chr1	stalkie_big_nohaplotig	exon	17519643	17519769	98	-	.	Parent=FBgn0050280.3.mrna1;Target=FBgn0050280.3 705 831 +
Chr1	stalkie_big_nohaplotig	exon	17521819	17521860	100	-	.	Parent=FBgn0050280.3.mrna1;Target=FBgn0050280.3 663 704 +
Chr1	stalkie_big_nohaplotig	exon	17521919	17522447	96	-	.	Parent=FBgn0050280.3.mrna1;Target=FBgn0050280.3 134 662 +
Chr1	stalkie_big_nohaplotig	CDS	17519643	17519769	.	-	1	Parent=FBgn0050280.3.mrna1;Target=FBgn0050280.3 705 831 +
Chr1	stalkie_big_nohaplotig	CDS	17521819	17521860	.	-	1	Parent=FBgn0050280.3.mrna1;Target=FBgn0050280.3 663 704 +
Chr1	stalkie_big_nohaplotig	CDS	17521919	17522445	.	-	0	Parent=FBgn0050280.3.mrna1;Target=FBgn0050280.3 136 662 +
Chr1	gffcl	locus	17578911	17580515	.	-	.	ID=RLOC_00006168;geneIDs=FBgn0037162.1.path2;transcripts=FBgn0037162.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	17578911	17580515	.	-	.	ID=FBgn0037162.1.mrna2;geneID=FBgn0037162.1.path2;Name=FBgn0037162.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1603;mismatches=2;indels=0;unknowns=0;Target=FBgn0037162.1 1605 1 .;locus=RLOC_00006168
Chr1	stalkie_big_nohaplotig	exon	17578911	17580515	99	-	.	Parent=FBgn0037162.1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	17578911	17580515	.	-	0	Parent=FBgn0037162.1.mrna2
Chr1	gffcl	locus	17627460	17628675	.	-	.	ID=RLOC_00006169;geneIDs=comp143943_c0_seq1.path1,comp205153_c0_seq1.path1,comp316763_c0_seq1.path1;transcripts=comp143943_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17627972	17628675	.	-	.	ID=comp143943_c0_seq1.mrna1;geneID=comp143943_c0_seq1.path1;Name=comp143943_c0_seq1;Dir=antisensecoverage=95.1;identity=98.8;matches=418;mismatches=5;indels=0;unknowns=0;locus=RLOC_00006169
Chr1	stalkie_big_nohaplotig	exon	17627972	17628298	98	-	.	Parent=comp143943_c0_seq1.mrna1;Target=comp143943_c0_seq1 23 349 -
Chr1	stalkie_big_nohaplotig	exon	17628580	17628675	98	-	.	Parent=comp143943_c0_seq1.mrna1;Target=comp143943_c0_seq1 350 445 -
Chr1	stalkie_big_nohaplotig	CDS	17628122	17628298	.	-	0	Parent=comp143943_c0_seq1.mrna1;Target=comp143943_c0_seq1 173 349 .
Chr1	stalkie_big_nohaplotig	CDS	17628580	17628591	.	-	0	Parent=comp143943_c0_seq1.mrna1;Target=comp143943_c0_seq1 350 361 .
Chr1	gffcl	locus	17639020	17640732	.	+	.	ID=RLOC_00006170;geneIDs=FBgn0036587.1.path1;transcripts=FBgn0036587.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17639020	17640732	.	+	.	ID=FBgn0036587.1.mrna1;geneID=FBgn0036587.1.path1;Name=FBgn0036587.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1699;mismatches=14;indels=0;unknowns=0;Target=FBgn0036587.1 1713 1 .;locus=RLOC_00006170
Chr1	stalkie_big_nohaplotig	exon	17639020	17640732	99	+	.	Parent=FBgn0036587.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	17639020	17640732	.	+	0	Parent=FBgn0036587.1.mrna1
Chr1	gffcl	locus	17644754	17645337	.	+	.	ID=RLOC_00006171;geneIDs=comp155747_c0_seq1.path1;transcripts=comp155747_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17644754	17645337	.	+	.	ID=comp155747_c0_seq1.mrna1;geneID=comp155747_c0_seq1.path1;Name=comp155747_c0_seq1;Dir=antisensecoverage=100.0;identity=90.3;matches=465;mismatches=25;indels=25;unknowns=0;locus=RLOC_00006171
Chr1	stalkie_big_nohaplotig	exon	17644754	17644810	91	+	.	Parent=comp155747_c0_seq1.mrna1;Target=comp155747_c0_seq1 458 515 -
Chr1	stalkie_big_nohaplotig	exon	17644905	17645337	90	+	.	Parent=comp155747_c0_seq1.mrna1;Target=comp155747_c0_seq1 1 457 -
Chr1	stalkie_big_nohaplotig	CDS	17644799	17644810	.	+	0	Parent=comp155747_c0_seq1.mrna1;Target=comp155747_c0_seq1 458 469 .
Chr1	stalkie_big_nohaplotig	CDS	17644905	17645243	.	+	0	Parent=comp155747_c0_seq1.mrna1;Target=comp155747_c0_seq1 95 457 .
Chr1	gffcl	locus	17646768	17647428	.	-	.	ID=RLOC_00006172;geneIDs=comp154347_c0_seq1.path1;transcripts=comp154347_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17646768	17647428	.	-	.	ID=comp154347_c0_seq1.mrna1;geneID=comp154347_c0_seq1.path1;Name=comp154347_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.4;matches=658;mismatches=3;indels=1;unknowns=0;Target=comp154347_c0_seq1 662 1 .;CDS_Target=comp154347_c0_seq1 660 85 .;locus=RLOC_00006172
Chr1	stalkie_big_nohaplotig	exon	17646768	17647428	99	-	.	Parent=comp154347_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	17646770	17647345	.	-	0	Parent=comp154347_c0_seq1.mrna1
Chr1	gffcl	locus	17650023	17651050	.	+	.	ID=RLOC_00006173;geneIDs=comp146447_c0_seq1.path1;transcripts=comp146447_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17650023	17651050	.	+	.	ID=comp146447_c0_seq1.mrna1;geneID=comp146447_c0_seq1.path1;Name=comp146447_c0_seq1;Dir=antisensecoverage=97.2;identity=99.4;matches=513;mismatches=3;indels=0;unknowns=0;locus=RLOC_00006173
Chr1	stalkie_big_nohaplotig	exon	17650023	17650130	99	+	.	Parent=comp146447_c0_seq1.mrna1;Target=comp146447_c0_seq1 424 531 -
Chr1	stalkie_big_nohaplotig	exon	17650643	17651050	99	+	.	Parent=comp146447_c0_seq1.mrna1;Target=comp146447_c0_seq1 16 423 -
Chr1	stalkie_big_nohaplotig	CDS	17650119	17650130	.	+	0	Parent=comp146447_c0_seq1.mrna1;Target=comp146447_c0_seq1 424 435 .
Chr1	stalkie_big_nohaplotig	CDS	17650643	17650855	.	+	0	Parent=comp146447_c0_seq1.mrna1;Target=comp146447_c0_seq1 211 423 .
Chr1	gffcl	locus	17656505	17657188	.	+	.	ID=RLOC_00006174;geneIDs=comp154369_c0_seq1.path1;transcripts=comp154369_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17656505	17657188	.	+	.	ID=comp154369_c0_seq1.mrna1;geneID=comp154369_c0_seq1.path1;Name=comp154369_c0_seq1;Dir=sensecoverage=96.9;identity=98.9;matches=525;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006174
Chr1	stalkie_big_nohaplotig	exon	17656505	17656579	100	+	.	Parent=comp154369_c0_seq1.mrna1;Target=comp154369_c0_seq1 18 92 +
Chr1	stalkie_big_nohaplotig	exon	17656643	17656760	99	+	.	Parent=comp154369_c0_seq1.mrna1;Target=comp154369_c0_seq1 93 210 +
Chr1	stalkie_big_nohaplotig	exon	17656851	17657188	98	+	.	Parent=comp154369_c0_seq1.mrna1;Target=comp154369_c0_seq1 211 548 +
Chr1	stalkie_big_nohaplotig	CDS	17656568	17656579	.	+	0	Parent=comp154369_c0_seq1.mrna1;Target=comp154369_c0_seq1 81 92 +
Chr1	stalkie_big_nohaplotig	CDS	17656643	17656760	.	+	0	Parent=comp154369_c0_seq1.mrna1;Target=comp154369_c0_seq1 93 210 +
Chr1	stalkie_big_nohaplotig	CDS	17656851	17657119	.	+	2	Parent=comp154369_c0_seq1.mrna1;Target=comp154369_c0_seq1 211 479 +
Chr1	gffcl	locus	17662797	17665269	.	-	.	ID=RLOC_00006175;geneIDs=comp150444_c0_seq1.path1;transcripts=comp150444_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17662797	17665269	.	-	.	ID=comp150444_c0_seq1.mrna1;geneID=comp150444_c0_seq1.path1;Name=comp150444_c0_seq1;Dir=antisensecoverage=83.8;identity=100.0;matches=676;mismatches=0;indels=0;unknowns=0;Target=comp150444_c0_seq1 449 715 .;locus=RLOC_00006175
Chr1	stalkie_big_nohaplotig	exon	17662797	17663033	100	-	.	Parent=comp150444_c0_seq1.mrna1;Target=comp150444_c0_seq1 132 368 -
Chr1	stalkie_big_nohaplotig	exon	17664831	17665269	100	-	.	Parent=comp150444_c0_seq1.mrna1;Target=comp150444_c0_seq1 369 807 -
Chr1	stalkie_big_nohaplotig	CDS	17664911	17665177	.	-	0	Parent=comp150444_c0_seq1.mrna1
Chr1	gffcl	locus	17665344	17666200	.	+	.	ID=RLOC_00006176;geneIDs=comp124957_c0_seq1.path1;transcripts=comp124957_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17665344	17666200	.	+	.	ID=comp124957_c0_seq1.mrna1;geneID=comp124957_c0_seq1.path1;Name=comp124957_c0_seq1;Dir=sensecoverage=97.8;identity=99.9;matches=788;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006176
Chr1	stalkie_big_nohaplotig	exon	17665344	17665593	100	+	.	Parent=comp124957_c0_seq1.mrna1;Target=comp124957_c0_seq1 1 250 +
Chr1	stalkie_big_nohaplotig	exon	17665662	17666200	99	+	.	Parent=comp124957_c0_seq1.mrna1;Target=comp124957_c0_seq1 251 789 +
Chr1	stalkie_big_nohaplotig	CDS	17665582	17665593	.	+	0	Parent=comp124957_c0_seq1.mrna1;Target=comp124957_c0_seq1 239 250 +
Chr1	stalkie_big_nohaplotig	CDS	17665662	17666054	.	+	0	Parent=comp124957_c0_seq1.mrna1;Target=comp124957_c0_seq1 251 643 +
Chr1	gffcl	locus	17666236	17666497	.	-	.	ID=RLOC_00006177;geneIDs=comp136804_c0_seq1.path1;transcripts=comp136804_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17666236	17666497	.	-	.	ID=comp136804_c0_seq1.mrna1;geneID=comp136804_c0_seq1.path1;Name=comp136804_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.2;matches=239;mismatches=8;indels=15;unknowns=0;Target=comp136804_c0_seq1 247 1 .;CDS_Target=comp136804_c0_seq1 187 143 .;locus=RLOC_00006177
Chr1	stalkie_big_nohaplotig	exon	17666236	17666497	91	-	.	Parent=comp136804_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	17666296	17666355	.	-	0	Parent=comp136804_c0_seq1.mrna1
Chr1	gffcl	locus	17667848	17671360	.	-	.	ID=RLOC_00006178;geneIDs=comp151748_c0_seq1.path1;transcripts=comp151748_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17667848	17671360	.	-	.	ID=comp151748_c0_seq1.mrna1;geneID=comp151748_c0_seq1.path1;Name=comp151748_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=885;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006178
Chr1	stalkie_big_nohaplotig	exon	17667848	17668652	99	-	.	Parent=comp151748_c0_seq1.mrna1;Target=comp151748_c0_seq1 82 886 +
Chr1	stalkie_big_nohaplotig	exon	17671280	17671360	100	-	.	Parent=comp151748_c0_seq1.mrna1;Target=comp151748_c0_seq1 1 81 +
Chr1	stalkie_big_nohaplotig	CDS	17668155	17668652	.	-	0	Parent=comp151748_c0_seq1.mrna1;Target=comp151748_c0_seq1 82 579 +
Chr1	stalkie_big_nohaplotig	CDS	17671280	17671291	.	-	0	Parent=comp151748_c0_seq1.mrna1;Target=comp151748_c0_seq1 70 81 +
Chr1	gffcl	locus	17674618	17674873	.	+	.	ID=RLOC_00006179;geneIDs=comp150012_c0_seq1.path1;transcripts=comp150012_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17674618	17674873	.	+	.	ID=comp150012_c0_seq1.mrna1;geneID=comp150012_c0_seq1.path1;Name=comp150012_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=253;mismatches=3;indels=0;unknowns=0;Target=comp150012_c0_seq1 256 1 .;CDS_Target=comp150012_c0_seq1 186 121 .;locus=RLOC_00006179
Chr1	stalkie_big_nohaplotig	exon	17674618	17674873	98	+	.	Parent=comp150012_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	17674738	17674803	.	+	0	Parent=comp150012_c0_seq1.mrna1
Chr1	gffcl	locus	17686736	17687252	.	+	.	ID=RLOC_00006180;geneIDs=comp56527_c0_seq1.path1;transcripts=comp56527_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17686736	17687252	.	+	.	ID=comp56527_c0_seq1.mrna1;geneID=comp56527_c0_seq1.path1;Name=comp56527_c0_seq1;Dir=antisensecoverage=96.2;identity=99.6;matches=455;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006180
Chr1	stalkie_big_nohaplotig	exon	17686736	17686836	99	+	.	Parent=comp56527_c0_seq1.mrna1;Target=comp56527_c0_seq1 375 475 -
Chr1	stalkie_big_nohaplotig	exon	17686897	17687252	99	+	.	Parent=comp56527_c0_seq1.mrna1;Target=comp56527_c0_seq1 19 374 -
Chr1	stalkie_big_nohaplotig	CDS	17686825	17686836	.	+	0	Parent=comp56527_c0_seq1.mrna1;Target=comp56527_c0_seq1 375 386 .
Chr1	stalkie_big_nohaplotig	CDS	17686897	17687205	.	+	0	Parent=comp56527_c0_seq1.mrna1;Target=comp56527_c0_seq1 66 374 .
Chr1	gffcl	locus	17691401	17692567	.	-	.	ID=RLOC_00006181;geneIDs=FBgn0031407.3.path1;transcripts=FBgn0031407.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17691401	17692567	.	-	.	ID=FBgn0031407.3.mrna1;geneID=FBgn0031407.3.path1;Name=FBgn0031407.3;Dir=sensecoverage=100.0;identity=99.8;matches=482;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006181
Chr1	stalkie_big_nohaplotig	exon	17691401	17691500	100	-	.	Parent=FBgn0031407.3.mrna1;Target=FBgn0031407.3 384 483 +
Chr1	stalkie_big_nohaplotig	exon	17692125	17692351	100	-	.	Parent=FBgn0031407.3.mrna1;Target=FBgn0031407.3 157 383 +
Chr1	stalkie_big_nohaplotig	exon	17692412	17692567	99	-	.	Parent=FBgn0031407.3.mrna1;Target=FBgn0031407.3 1 156 +
Chr1	stalkie_big_nohaplotig	CDS	17691401	17691500	.	-	1	Parent=FBgn0031407.3.mrna1;Target=FBgn0031407.3 384 483 +
Chr1	stalkie_big_nohaplotig	CDS	17692125	17692351	.	-	0	Parent=FBgn0031407.3.mrna1;Target=FBgn0031407.3 157 383 +
Chr1	stalkie_big_nohaplotig	CDS	17692412	17692567	.	-	0	Parent=FBgn0031407.3.mrna1;Target=FBgn0031407.3 1 156 +
Chr1	gffcl	locus	17703816	17705602	.	-	.	ID=RLOC_00006182;geneIDs=comp155932_c0_seq1.path1;transcripts=comp155932_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17703816	17705602	.	-	.	ID=comp155932_c0_seq1.mrna1;geneID=comp155932_c0_seq1.path1;Name=comp155932_c0_seq1;Dir=sensecoverage=100.0;identity=98.7;matches=1707;mismatches=12;indels=11;unknowns=0;locus=RLOC_00006182
Chr1	stalkie_big_nohaplotig	exon	17703816	17705136	98	-	.	Parent=comp155932_c0_seq1.mrna1;Target=comp155932_c0_seq1 405 1724 +
Chr1	stalkie_big_nohaplotig	exon	17705199	17705602	99	-	.	Parent=comp155932_c0_seq1.mrna1;Target=comp155932_c0_seq1 1 404 +
Chr1	stalkie_big_nohaplotig	CDS	17704438	17705136	.	-	0	Parent=comp155932_c0_seq1.mrna1;Target=comp155932_c0_seq1 405 1103 +
Chr1	stalkie_big_nohaplotig	CDS	17705199	17705210	.	-	0	Parent=comp155932_c0_seq1.mrna1;Target=comp155932_c0_seq1 393 404 +
Chr1	gffcl	locus	17730271	17732526	.	-	.	ID=RLOC_00006183;geneIDs=comp156846_c0_seq1.path1;transcripts=comp156846_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17730271	17732526	.	-	.	ID=comp156846_c0_seq1.mrna1;geneID=comp156846_c0_seq1.path1;Name=comp156846_c0_seq1;Dir=antisensecoverage=94.2;identity=99.3;matches=941;mismatches=5;indels=2;unknowns=0;locus=RLOC_00006183
Chr1	stalkie_big_nohaplotig	exon	17730271	17731127	99	-	.	Parent=comp156846_c0_seq1.mrna1;Target=comp156846_c0_seq1 21 879 -
Chr1	stalkie_big_nohaplotig	exon	17732438	17732526	100	-	.	Parent=comp156846_c0_seq1.mrna1;Target=comp156846_c0_seq1 880 968 -
Chr1	stalkie_big_nohaplotig	CDS	17730657	17731127	.	-	0	Parent=comp156846_c0_seq1.mrna1;Target=comp156846_c0_seq1 409 879 .
Chr1	stalkie_big_nohaplotig	CDS	17732438	17732524	.	-	0	Parent=comp156846_c0_seq1.mrna1;Target=comp156846_c0_seq1 880 966 .
Chr1	gffcl	locus	17760417	17769254	.	-	.	ID=RLOC_00006184;geneIDs=FBgn0035187.1.path1;transcripts=FBgn0035187.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17760417	17769254	.	-	.	ID=FBgn0035187.1.mrna1;geneID=FBgn0035187.1.path1;Name=FBgn0035187.1;Dir=sensecoverage=100.0;identity=99.2;matches=1628;mismatches=13;indels=0;unknowns=0;locus=RLOC_00006184
Chr1	stalkie_big_nohaplotig	exon	17760417	17760714	98	-	.	Parent=FBgn0035187.1.mrna1;Target=FBgn0035187.1 1344 1641 +
Chr1	stalkie_big_nohaplotig	exon	17763399	17763631	100	-	.	Parent=FBgn0035187.1.mrna1;Target=FBgn0035187.1 1111 1343 +
Chr1	stalkie_big_nohaplotig	exon	17763699	17763825	99	-	.	Parent=FBgn0035187.1.mrna1;Target=FBgn0035187.1 984 1110 +
Chr1	stalkie_big_nohaplotig	exon	17763886	17764075	99	-	.	Parent=FBgn0035187.1.mrna1;Target=FBgn0035187.1 794 983 +
Chr1	stalkie_big_nohaplotig	exon	17764855	17764946	98	-	.	Parent=FBgn0035187.1.mrna1;Target=FBgn0035187.1 702 793 +
Chr1	stalkie_big_nohaplotig	exon	17765025	17765075	98	-	.	Parent=FBgn0035187.1.mrna1;Target=FBgn0035187.1 651 701 +
Chr1	stalkie_big_nohaplotig	exon	17765262	17765427	98	-	.	Parent=FBgn0035187.1.mrna1;Target=FBgn0035187.1 485 650 +
Chr1	stalkie_big_nohaplotig	exon	17765485	17765635	97	-	.	Parent=FBgn0035187.1.mrna1;Target=FBgn0035187.1 334 484 +
Chr1	stalkie_big_nohaplotig	exon	17768853	17769059	100	-	.	Parent=FBgn0035187.1.mrna1;Target=FBgn0035187.1 127 333 +
Chr1	stalkie_big_nohaplotig	exon	17769129	17769254	100	-	.	Parent=FBgn0035187.1.mrna1;Target=FBgn0035187.1 1 126 +
Chr1	stalkie_big_nohaplotig	CDS	17760417	17760714	.	-	1	Parent=FBgn0035187.1.mrna1;Target=FBgn0035187.1 1344 1641 +
Chr1	stalkie_big_nohaplotig	CDS	17763399	17763631	.	-	0	Parent=FBgn0035187.1.mrna1;Target=FBgn0035187.1 1111 1343 +
Chr1	stalkie_big_nohaplotig	CDS	17763699	17763825	.	-	1	Parent=FBgn0035187.1.mrna1;Target=FBgn0035187.1 984 1110 +
Chr1	stalkie_big_nohaplotig	CDS	17763886	17764075	.	-	2	Parent=FBgn0035187.1.mrna1;Target=FBgn0035187.1 794 983 +
Chr1	stalkie_big_nohaplotig	CDS	17764855	17764946	.	-	1	Parent=FBgn0035187.1.mrna1;Target=FBgn0035187.1 702 793 +
Chr1	stalkie_big_nohaplotig	CDS	17765025	17765075	.	-	1	Parent=FBgn0035187.1.mrna1;Target=FBgn0035187.1 651 701 +
Chr1	stalkie_big_nohaplotig	CDS	17765262	17765427	.	-	2	Parent=FBgn0035187.1.mrna1;Target=FBgn0035187.1 485 650 +
Chr1	stalkie_big_nohaplotig	CDS	17765485	17765635	.	-	0	Parent=FBgn0035187.1.mrna1;Target=FBgn0035187.1 334 484 +
Chr1	stalkie_big_nohaplotig	CDS	17768853	17769059	.	-	0	Parent=FBgn0035187.1.mrna1;Target=FBgn0035187.1 127 333 +
Chr1	stalkie_big_nohaplotig	CDS	17769129	17769254	.	-	0	Parent=FBgn0035187.1.mrna1;Target=FBgn0035187.1 1 126 +
Chr1	gffcl	locus	17775947	17779301	.	+	.	ID=RLOC_00006185;geneIDs=FBgn0040281.1.path1;transcripts=FBgn0040281.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17775947	17779301	.	+	.	ID=FBgn0040281.1.mrna1;geneID=FBgn0040281.1.path1;Name=FBgn0040281.1;Dir=sensecoverage=100.0;identity=99.9;matches=1495;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006185
Chr1	stalkie_big_nohaplotig	exon	17775947	17776092	100	+	.	Parent=FBgn0040281.1.mrna1;Target=FBgn0040281.1 1 146 +
Chr1	stalkie_big_nohaplotig	exon	17776297	17776643	99	+	.	Parent=FBgn0040281.1.mrna1;Target=FBgn0040281.1 147 493 +
Chr1	stalkie_big_nohaplotig	exon	17778019	17778639	99	+	.	Parent=FBgn0040281.1.mrna1;Target=FBgn0040281.1 494 1114 +
Chr1	stalkie_big_nohaplotig	exon	17778788	17778915	100	+	.	Parent=FBgn0040281.1.mrna1;Target=FBgn0040281.1 1115 1242 +
Chr1	stalkie_big_nohaplotig	exon	17778985	17779169	100	+	.	Parent=FBgn0040281.1.mrna1;Target=FBgn0040281.1 1243 1427 +
Chr1	stalkie_big_nohaplotig	exon	17779232	17779301	100	+	.	Parent=FBgn0040281.1.mrna1;Target=FBgn0040281.1 1428 1497 +
Chr1	stalkie_big_nohaplotig	CDS	17775947	17776092	.	+	0	Parent=FBgn0040281.1.mrna1;Target=FBgn0040281.1 1 146 +
Chr1	stalkie_big_nohaplotig	CDS	17776297	17776643	.	+	1	Parent=FBgn0040281.1.mrna1;Target=FBgn0040281.1 147 493 +
Chr1	stalkie_big_nohaplotig	CDS	17778019	17778639	.	+	2	Parent=FBgn0040281.1.mrna1;Target=FBgn0040281.1 494 1114 +
Chr1	stalkie_big_nohaplotig	CDS	17778788	17778915	.	+	2	Parent=FBgn0040281.1.mrna1;Target=FBgn0040281.1 1115 1242 +
Chr1	stalkie_big_nohaplotig	CDS	17778985	17779169	.	+	0	Parent=FBgn0040281.1.mrna1;Target=FBgn0040281.1 1243 1427 +
Chr1	stalkie_big_nohaplotig	CDS	17779232	17779301	.	+	1	Parent=FBgn0040281.1.mrna1;Target=FBgn0040281.1 1428 1497 +
Chr1	gffcl	locus	17780828	17781760	.	-	.	ID=RLOC_00006186;geneIDs=comp157494_c0_seq1.path1;transcripts=comp157494_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17780828	17781760	.	-	.	ID=comp157494_c0_seq1.mrna1;geneID=comp157494_c0_seq1.path1;Name=comp157494_c0_seq1;Dir=indeterminatecoverage=70.4;identity=98.9;matches=924;mismatches=6;indels=4;unknowns=0;Target=comp157494_c0_seq1 1307 377 .;CDS_Target=comp157494_c0_seq1 1306 1214 .;locus=RLOC_00006186
Chr1	stalkie_big_nohaplotig	exon	17780828	17781760	98	-	.	Parent=comp157494_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	17780829	17780921	.	-	0	Parent=comp157494_c0_seq1.mrna1
Chr1	gffcl	locus	17787591	17872152	.	+	.	ID=RLOC_00006187;geneIDs=comp145217_c0_seq1.path1,comp159944_c0_seq1.path1;transcripts=comp159944_c0_seq1.mrna1,comp145217_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17787591	17872152	.	+	.	ID=comp159944_c0_seq1.mrna1;geneID=comp159944_c0_seq1.path1;Name=comp159944_c0_seq1;Dir=sensecoverage=71.3;identity=79.6;matches=579;mismatches=145;indels=3;unknowns=0;locus=RLOC_00006187
Chr1	stalkie_big_nohaplotig	exon	17787591	17788220	77	+	.	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 1 633 +
Chr1	stalkie_big_nohaplotig	exon	17790891	17790893	100	+	.	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 634 636 +
Chr1	stalkie_big_nohaplotig	exon	17791100	17791101	100	+	.	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 637 638 +
Chr1	stalkie_big_nohaplotig	exon	17799795	17799802	100	+	.	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 639 646 +
Chr1	stalkie_big_nohaplotig	exon	17804334	17804340	100	+	.	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 647 653 +
Chr1	stalkie_big_nohaplotig	exon	17811975	17811977	66	+	.	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 654 656 +
Chr1	stalkie_big_nohaplotig	exon	17815113	17815125	92	+	.	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 657 669 +
Chr1	stalkie_big_nohaplotig	exon	17821763	17821764	100	+	.	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 670 671 +
Chr1	stalkie_big_nohaplotig	exon	17827219	17827226	100	+	.	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 672 679 +
Chr1	stalkie_big_nohaplotig	exon	17830793	17830794	100	+	.	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 680 681 +
Chr1	stalkie_big_nohaplotig	exon	17837134	17837138	100	+	.	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 682 686 +
Chr1	stalkie_big_nohaplotig	exon	17839525	17839526	100	+	.	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 687 688 +
Chr1	stalkie_big_nohaplotig	exon	17844217	17844232	93	+	.	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 689 704 +
Chr1	stalkie_big_nohaplotig	exon	17858233	17858245	84	+	.	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 705 717 +
Chr1	stalkie_big_nohaplotig	exon	17872143	17872152	100	+	.	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 718 727 +
Chr1	stalkie_big_nohaplotig	CDS	17788191	17788220	.	+	0	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 604 633 +
Chr1	stalkie_big_nohaplotig	CDS	17790891	17790893	.	+	0	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 634 636 +
Chr1	stalkie_big_nohaplotig	CDS	17791100	17791101	.	+	0	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 637 638 +
Chr1	stalkie_big_nohaplotig	CDS	17799795	17799802	.	+	1	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 639 646 +
Chr1	stalkie_big_nohaplotig	CDS	17804334	17804340	.	+	2	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 647 653 +
Chr1	stalkie_big_nohaplotig	CDS	17811975	17811977	.	+	1	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 654 656 +
Chr1	stalkie_big_nohaplotig	CDS	17815113	17815125	.	+	1	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 657 669 +
Chr1	stalkie_big_nohaplotig	CDS	17821763	17821764	.	+	0	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 670 671 +
Chr1	stalkie_big_nohaplotig	CDS	17827219	17827226	.	+	1	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 672 679 +
Chr1	stalkie_big_nohaplotig	CDS	17830793	17830794	.	+	2	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 680 681 +
Chr1	stalkie_big_nohaplotig	CDS	17837134	17837138	.	+	0	Parent=comp159944_c0_seq1.mrna1;Target=comp159944_c0_seq1 682 686 +
Chr1	stalkie_big_nohaplotig	mRNA	17790746	17791002	.	+	.	ID=comp145217_c0_seq1.mrna1;geneID=comp145217_c0_seq1.path1;Name=comp145217_c0_seq1;Dir=indeterminatecoverage=89.2;identity=99.6;matches=256;mismatches=1;indels=0;unknowns=0;Target=comp145217_c0_seq1 259 3 .;CDS_Target=comp145217_c0_seq1 174 112 .;locus=RLOC_00006187
Chr1	stalkie_big_nohaplotig	exon	17790746	17791002	99	+	.	Parent=comp145217_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	17790855	17790917	.	+	0	Parent=comp145217_c0_seq1.mrna1
Chr1	gffcl	locus	17791103	17791600	.	.	.	ID=RLOC_00006188;geneIDs=comp119110_c0_seq1.path1,comp142390_c0_seq1.path1;transcripts=comp142390_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17791103	17791393	.	-	.	ID=comp142390_c0_seq1.mrna1;geneID=comp142390_c0_seq1.path1;Name=comp142390_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.2;matches=277;mismatches=7;indels=7;unknowns=0;Target=comp142390_c0_seq1 284 1 .;CDS_Target=comp142390_c0_seq1 15 1 .;locus=RLOC_00006188
Chr1	stalkie_big_nohaplotig	exon	17791103	17791393	95	-	.	Parent=comp142390_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	17791379	17791393	.	-	0	Parent=comp142390_c0_seq1.mrna1
Chr1	gffcl	locus	17791639	17793184	.	-	.	ID=RLOC_00006189;geneIDs=comp150798_c0_seq1.path1;transcripts=comp150798_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17791639	17793184	.	-	.	ID=comp150798_c0_seq1.mrna1;geneID=comp150798_c0_seq1.path1;Name=comp150798_c0_seq1;Dir=indeterminatecoverage=99.7;identity=96.3;matches=1511;mismatches=26;indels=32;unknowns=0;Target=comp150798_c0_seq1 1561 2 .;CDS_Target=comp150798_c0_seq1 222 4 .;locus=RLOC_00006189
Chr1	stalkie_big_nohaplotig	exon	17791639	17793184	96	-	.	Parent=comp150798_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	17792964	17793182	.	-	0	Parent=comp150798_c0_seq1.mrna1
Chr1	gffcl	locus	17793766	17951659	.	.	.	ID=RLOC_00006190;geneIDs=FBgn0038300.1.path2,comp150232_c0_seq1.path1,comp161666_c1_seq1.path1;transcripts=FBgn0038300.1.mrna2,comp150232_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17794174	17951592	.	+	.	ID=FBgn0038300.1.mrna2;geneID=FBgn0038300.1.path2;Name=FBgn0038300.1;Dir=antisensecoverage=70.2;identity=97.5;matches=2586;mismatches=52;indels=15;unknowns=0;Target=FBgn0038300.1 1954 4320 .;locus=RLOC_00006190
Chr1	stalkie_big_nohaplotig	exon	17794174	17796638	99	+	.	Parent=FBgn0038300.1.mrna2;Target=FBgn0038300.1 1864 4320 -
Chr1	stalkie_big_nohaplotig	exon	17812457	17812458	100	+	.	Parent=FBgn0038300.1.mrna2;Target=FBgn0038300.1 1862 1863 -
Chr1	stalkie_big_nohaplotig	exon	17816898	17816904	85	+	.	Parent=FBgn0038300.1.mrna2;Target=FBgn0038300.1 1855 1861 -
Chr1	stalkie_big_nohaplotig	exon	17827736	17827745	100	+	.	Parent=FBgn0038300.1.mrna2;Target=FBgn0038300.1 1845 1854 -
Chr1	stalkie_big_nohaplotig	exon	17835670	17835675	100	+	.	Parent=FBgn0038300.1.mrna2;Target=FBgn0038300.1 1839 1844 -
Chr1	stalkie_big_nohaplotig	exon	17856831	17856837	100	+	.	Parent=FBgn0038300.1.mrna2;Target=FBgn0038300.1 1832 1838 -
Chr1	stalkie_big_nohaplotig	exon	17864575	17864585	72	+	.	Parent=FBgn0038300.1.mrna2;Target=FBgn0038300.1 1821 1831 -
Chr1	stalkie_big_nohaplotig	exon	17865286	17865292	100	+	.	Parent=FBgn0038300.1.mrna2;Target=FBgn0038300.1 1814 1820 -
Chr1	stalkie_big_nohaplotig	exon	17869968	17869973	100	+	.	Parent=FBgn0038300.1.mrna2;Target=FBgn0038300.1 1808 1813 -
Chr1	stalkie_big_nohaplotig	exon	17874172	17874212	48	+	.	Parent=FBgn0038300.1.mrna2;Target=FBgn0038300.1 1770 1807 -
Chr1	stalkie_big_nohaplotig	exon	17884826	17884830	100	+	.	Parent=FBgn0038300.1.mrna2;Target=FBgn0038300.1 1765 1769 -
Chr1	stalkie_big_nohaplotig	exon	17892081	17892092	75	+	.	Parent=FBgn0038300.1.mrna2;Target=FBgn0038300.1 1753 1764 -
Chr1	stalkie_big_nohaplotig	exon	17892181	17892182	100	+	.	Parent=FBgn0038300.1.mrna2;Target=FBgn0038300.1 1751 1752 -
Chr1	stalkie_big_nohaplotig	exon	17895968	17895977	100	+	.	Parent=FBgn0038300.1.mrna2;Target=FBgn0038300.1 1741 1750 -
Chr1	stalkie_big_nohaplotig	exon	17902287	17902316	53	+	.	Parent=FBgn0038300.1.mrna2;Target=FBgn0038300.1 1713 1740 -
Chr1	stalkie_big_nohaplotig	exon	17918063	17918070	100	+	.	Parent=FBgn0038300.1.mrna2;Target=FBgn0038300.1 1372 1379 -
Chr1	stalkie_big_nohaplotig	exon	17918078	17918088	100	+	.	Parent=FBgn0038300.1.mrna2;Target=FBgn0038300.1 1301 1311 -
Chr1	stalkie_big_nohaplotig	exon	17932723	17932724	100	+	.	Parent=FBgn0038300.1.mrna2;Target=FBgn0038300.1 1299 1300 -
Chr1	stalkie_big_nohaplotig	exon	17948745	17948747	100	+	.	Parent=FBgn0038300.1.mrna2;Target=FBgn0038300.1 1296 1298 -
Chr1	stalkie_big_nohaplotig	exon	17951587	17951592	50	+	.	Parent=FBgn0038300.1.mrna2;Target=FBgn0038300.1 1290 1295 -
Chr1	stalkie_big_nohaplotig	CDS	17794174	17796539	.	+	2	Parent=FBgn0038300.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	17951113	17951659	.	-	.	ID=comp150232_c0_seq1.mrna1;geneID=comp150232_c0_seq1.path1;Name=comp150232_c0_seq1;Dir=indeterminatecoverage=98.9;identity=94.5;matches=517;mismatches=19;indels=11;unknowns=0;Target=comp150232_c0_seq1 542 7 .;CDS_Target=comp150232_c0_seq1 480 361 .;locus=RLOC_00006190
Chr1	stalkie_big_nohaplotig	exon	17951113	17951659	94	-	.	Parent=comp150232_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	17951175	17951294	.	-	0	Parent=comp150232_c0_seq1.mrna1
Chr1	gffcl	locus	17811071	17813303	.	+	.	ID=RLOC_00006192;geneIDs=FBgn0035107.1.path1;transcripts=FBgn0035107.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17811071	17813303	.	+	.	ID=FBgn0035107.1.mrna1;geneID=FBgn0035107.1.path1;Name=FBgn0035107.1;Dir=sensecoverage=100.0;identity=99.9;matches=1351;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006192
Chr1	stalkie_big_nohaplotig	exon	17811071	17811288	100	+	.	Parent=FBgn0035107.1.mrna1;Target=FBgn0035107.1 1 218 +
Chr1	stalkie_big_nohaplotig	exon	17811379	17811839	99	+	.	Parent=FBgn0035107.1.mrna1;Target=FBgn0035107.1 219 679 +
Chr1	stalkie_big_nohaplotig	exon	17812035	17812232	100	+	.	Parent=FBgn0035107.1.mrna1;Target=FBgn0035107.1 680 877 +
Chr1	stalkie_big_nohaplotig	exon	17812292	17812455	100	+	.	Parent=FBgn0035107.1.mrna1;Target=FBgn0035107.1 878 1041 +
Chr1	stalkie_big_nohaplotig	exon	17812519	17812672	100	+	.	Parent=FBgn0035107.1.mrna1;Target=FBgn0035107.1 1042 1195 +
Chr1	stalkie_big_nohaplotig	exon	17813146	17813303	100	+	.	Parent=FBgn0035107.1.mrna1;Target=FBgn0035107.1 1196 1353 +
Chr1	stalkie_big_nohaplotig	CDS	17811071	17811288	.	+	0	Parent=FBgn0035107.1.mrna1;Target=FBgn0035107.1 1 218 +
Chr1	stalkie_big_nohaplotig	CDS	17811379	17811839	.	+	1	Parent=FBgn0035107.1.mrna1;Target=FBgn0035107.1 219 679 +
Chr1	stalkie_big_nohaplotig	CDS	17812035	17812232	.	+	2	Parent=FBgn0035107.1.mrna1;Target=FBgn0035107.1 680 877 +
Chr1	stalkie_big_nohaplotig	CDS	17812292	17812455	.	+	2	Parent=FBgn0035107.1.mrna1;Target=FBgn0035107.1 878 1041 +
Chr1	stalkie_big_nohaplotig	CDS	17812519	17812672	.	+	0	Parent=FBgn0035107.1.mrna1;Target=FBgn0035107.1 1042 1195 +
Chr1	stalkie_big_nohaplotig	CDS	17813146	17813303	.	+	2	Parent=FBgn0035107.1.mrna1;Target=FBgn0035107.1 1196 1353 +
Chr1	gffcl	locus	17813660	17819127	.	-	.	ID=RLOC_00006193;geneIDs=FBgn0025592.1.path1;transcripts=FBgn0025592.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17813660	17819127	.	-	.	ID=FBgn0025592.1.mrna1;geneID=FBgn0025592.1.path1;Name=FBgn0025592.1;Dir=sensecoverage=100.0;identity=99.7;matches=1561;mismatches=5;indels=0;unknowns=0;locus=RLOC_00006193
Chr1	stalkie_big_nohaplotig	exon	17813660	17813848	100	-	.	Parent=FBgn0025592.1.mrna1;Target=FBgn0025592.1 1378 1566 +
Chr1	stalkie_big_nohaplotig	exon	17813903	17814140	99	-	.	Parent=FBgn0025592.1.mrna1;Target=FBgn0025592.1 1140 1377 +
Chr1	stalkie_big_nohaplotig	exon	17814197	17815092	99	-	.	Parent=FBgn0025592.1.mrna1;Target=FBgn0025592.1 244 1139 +
Chr1	stalkie_big_nohaplotig	exon	17818885	17819127	100	-	.	Parent=FBgn0025592.1.mrna1;Target=FBgn0025592.1 1 243 +
Chr1	stalkie_big_nohaplotig	CDS	17813660	17813848	.	-	0	Parent=FBgn0025592.1.mrna1;Target=FBgn0025592.1 1378 1566 +
Chr1	stalkie_big_nohaplotig	CDS	17813903	17814140	.	-	1	Parent=FBgn0025592.1.mrna1;Target=FBgn0025592.1 1140 1377 +
Chr1	stalkie_big_nohaplotig	CDS	17814197	17815092	.	-	0	Parent=FBgn0025592.1.mrna1;Target=FBgn0025592.1 244 1139 +
Chr1	stalkie_big_nohaplotig	CDS	17818885	17819127	.	-	0	Parent=FBgn0025592.1.mrna1;Target=FBgn0025592.1 1 243 +
Chr1	gffcl	locus	17817299	17818780	.	+	.	ID=RLOC_00006194;geneIDs=FBgn0024945.1.path1;transcripts=FBgn0024945.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17817299	17818780	.	+	.	ID=FBgn0024945.1.mrna1;geneID=FBgn0024945.1.path1;Name=FBgn0024945.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1478;mismatches=4;indels=0;unknowns=0;Target=FBgn0024945.1 1482 1 .;locus=RLOC_00006194
Chr1	stalkie_big_nohaplotig	exon	17817299	17818780	99	+	.	Parent=FBgn0024945.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	17817299	17818780	.	+	0	Parent=FBgn0024945.1.mrna1
Chr1	gffcl	locus	17820492	17821379	.	+	.	ID=RLOC_00006195;geneIDs=FBgn0035109.1.path1;transcripts=FBgn0035109.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17820492	17821379	.	+	.	ID=FBgn0035109.1.mrna1;geneID=FBgn0035109.1.path1;Name=FBgn0035109.1;Dir=sensecoverage=100.0;identity=99.9;matches=830;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006195
Chr1	stalkie_big_nohaplotig	exon	17820492	17820672	99	+	.	Parent=FBgn0035109.1.mrna1;Target=FBgn0035109.1 1 181 +
Chr1	stalkie_big_nohaplotig	exon	17820730	17821379	100	+	.	Parent=FBgn0035109.1.mrna1;Target=FBgn0035109.1 182 831 +
Chr1	stalkie_big_nohaplotig	CDS	17820492	17820672	.	+	0	Parent=FBgn0035109.1.mrna1;Target=FBgn0035109.1 1 181 +
Chr1	stalkie_big_nohaplotig	CDS	17820730	17821379	.	+	2	Parent=FBgn0035109.1.mrna1;Target=FBgn0035109.1 182 831 +
Chr1	gffcl	locus	17823265	17829869	.	-	.	ID=RLOC_00006196;geneIDs=FBgn0027587.1.path1,comp160017_c0_seq1.path1;transcripts=comp160017_c0_seq1.mrna1,FBgn0027587.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17823265	17829869	.	-	.	ID=comp160017_c0_seq1.mrna1;geneID=comp160017_c0_seq1.path1;Name=comp160017_c0_seq1;Dir=sensecoverage=99.9;identity=99.4;matches=4806;mismatches=18;indels=11;unknowns=0;locus=RLOC_00006196
Chr1	stalkie_big_nohaplotig	exon	17823265	17823601	99	-	.	Parent=comp160017_c0_seq1.mrna1;Target=comp160017_c0_seq1 4501 4837 +
Chr1	stalkie_big_nohaplotig	exon	17823669	17823735	100	-	.	Parent=comp160017_c0_seq1.mrna1;Target=comp160017_c0_seq1 4434 4500 +
Chr1	stalkie_big_nohaplotig	exon	17823962	17824823	98	-	.	Parent=comp160017_c0_seq1.mrna1;Target=comp160017_c0_seq1 3563 4433 +
Chr1	stalkie_big_nohaplotig	exon	17824892	17826033	100	-	.	Parent=comp160017_c0_seq1.mrna1;Target=comp160017_c0_seq1 2421 3562 +
Chr1	stalkie_big_nohaplotig	exon	17826284	17826392	99	-	.	Parent=comp160017_c0_seq1.mrna1;Target=comp160017_c0_seq1 2312 2420 +
Chr1	stalkie_big_nohaplotig	exon	17827273	17827505	99	-	.	Parent=comp160017_c0_seq1.mrna1;Target=comp160017_c0_seq1 2079 2311 +
Chr1	stalkie_big_nohaplotig	exon	17827596	17827862	98	-	.	Parent=comp160017_c0_seq1.mrna1;Target=comp160017_c0_seq1 1812 2078 +
Chr1	stalkie_big_nohaplotig	exon	17827920	17828937	99	-	.	Parent=comp160017_c0_seq1.mrna1;Target=comp160017_c0_seq1 794 1811 +
Chr1	stalkie_big_nohaplotig	exon	17829020	17829445	99	-	.	Parent=comp160017_c0_seq1.mrna1;Target=comp160017_c0_seq1 368 793 +
Chr1	stalkie_big_nohaplotig	exon	17829505	17829869	98	-	.	Parent=comp160017_c0_seq1.mrna1;Target=comp160017_c0_seq1 5 367 +
Chr1	stalkie_big_nohaplotig	CDS	17825587	17826033	.	-	0	Parent=comp160017_c0_seq1.mrna1;Target=comp160017_c0_seq1 2421 2867 +
Chr1	stalkie_big_nohaplotig	CDS	17826284	17826392	.	-	1	Parent=comp160017_c0_seq1.mrna1;Target=comp160017_c0_seq1 2312 2420 +
Chr1	stalkie_big_nohaplotig	CDS	17827273	17827505	.	-	0	Parent=comp160017_c0_seq1.mrna1;Target=comp160017_c0_seq1 2079 2311 +
Chr1	stalkie_big_nohaplotig	CDS	17827596	17827862	.	-	0	Parent=comp160017_c0_seq1.mrna1;Target=comp160017_c0_seq1 1812 2078 +
Chr1	stalkie_big_nohaplotig	CDS	17827920	17828937	.	-	1	Parent=comp160017_c0_seq1.mrna1;Target=comp160017_c0_seq1 794 1811 +
Chr1	stalkie_big_nohaplotig	CDS	17829020	17829445	.	-	1	Parent=comp160017_c0_seq1.mrna1;Target=comp160017_c0_seq1 368 793 +
Chr1	stalkie_big_nohaplotig	CDS	17829505	17829524	.	-	0	Parent=comp160017_c0_seq1.mrna1;Target=comp160017_c0_seq1 348 367 +
Chr1	stalkie_big_nohaplotig	mRNA	17824623	17829530	.	-	.	ID=FBgn0027587.1.mrna1;geneID=FBgn0027587.1.path1;Name=FBgn0027587.1;Dir=sensecoverage=100.0;identity=99.5;matches=2804;mismatches=13;indels=0;unknowns=0;locus=RLOC_00006196
Chr1	stalkie_big_nohaplotig	exon	17824623	17824823	99	-	.	Parent=FBgn0027587.1.mrna1;Target=FBgn0027587.1 2617 2817 +
Chr1	stalkie_big_nohaplotig	exon	17824892	17824995	99	-	.	Parent=FBgn0027587.1.mrna1;Target=FBgn0027587.1 2513 2616 +
Chr1	stalkie_big_nohaplotig	exon	17825601	17826033	100	-	.	Parent=FBgn0027587.1.mrna1;Target=FBgn0027587.1 2080 2512 +
Chr1	stalkie_big_nohaplotig	exon	17826284	17826392	99	-	.	Parent=FBgn0027587.1.mrna1;Target=FBgn0027587.1 1971 2079 +
Chr1	stalkie_big_nohaplotig	exon	17827273	17827505	99	-	.	Parent=FBgn0027587.1.mrna1;Target=FBgn0027587.1 1738 1970 +
Chr1	stalkie_big_nohaplotig	exon	17827596	17827862	98	-	.	Parent=FBgn0027587.1.mrna1;Target=FBgn0027587.1 1471 1737 +
Chr1	stalkie_big_nohaplotig	exon	17827920	17828937	99	-	.	Parent=FBgn0027587.1.mrna1;Target=FBgn0027587.1 453 1470 +
Chr1	stalkie_big_nohaplotig	exon	17829020	17829445	99	-	.	Parent=FBgn0027587.1.mrna1;Target=FBgn0027587.1 27 452 +
Chr1	stalkie_big_nohaplotig	exon	17829505	17829530	100	-	.	Parent=FBgn0027587.1.mrna1;Target=FBgn0027587.1 1 26 +
Chr1	stalkie_big_nohaplotig	CDS	17824623	17824823	.	-	0	Parent=FBgn0027587.1.mrna1;Target=FBgn0027587.1 2617 2817 +
Chr1	stalkie_big_nohaplotig	CDS	17824892	17824995	.	-	2	Parent=FBgn0027587.1.mrna1;Target=FBgn0027587.1 2513 2616 +
Chr1	stalkie_big_nohaplotig	CDS	17825601	17826033	.	-	0	Parent=FBgn0027587.1.mrna1;Target=FBgn0027587.1 2080 2512 +
Chr1	stalkie_big_nohaplotig	CDS	17826284	17826392	.	-	1	Parent=FBgn0027587.1.mrna1;Target=FBgn0027587.1 1971 2079 +
Chr1	stalkie_big_nohaplotig	CDS	17827273	17827505	.	-	0	Parent=FBgn0027587.1.mrna1;Target=FBgn0027587.1 1738 1970 +
Chr1	stalkie_big_nohaplotig	CDS	17827596	17827862	.	-	0	Parent=FBgn0027587.1.mrna1;Target=FBgn0027587.1 1471 1737 +
Chr1	stalkie_big_nohaplotig	CDS	17827920	17828937	.	-	1	Parent=FBgn0027587.1.mrna1;Target=FBgn0027587.1 453 1470 +
Chr1	stalkie_big_nohaplotig	CDS	17829020	17829445	.	-	1	Parent=FBgn0027587.1.mrna1;Target=FBgn0027587.1 27 452 +
Chr1	stalkie_big_nohaplotig	CDS	17829505	17829530	.	-	0	Parent=FBgn0027587.1.mrna1;Target=FBgn0027587.1 1 26 +
Chr1	gffcl	locus	17835712	17838085	.	-	.	ID=RLOC_00006197;geneIDs=FBgn0029173.2.path1;transcripts=FBgn0029173.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17835712	17838085	.	-	.	ID=FBgn0029173.2.mrna1;geneID=FBgn0029173.2.path1;Name=FBgn0029173.2;Dir=sensecoverage=99.5;identity=98.6;matches=1631;mismatches=23;indels=0;unknowns=0;locus=RLOC_00006197
Chr1	stalkie_big_nohaplotig	exon	17835712	17836968	98	-	.	Parent=FBgn0029173.2.mrna1;Target=FBgn0029173.2 406 1662 +
Chr1	stalkie_big_nohaplotig	exon	17837023	17837123	100	-	.	Parent=FBgn0029173.2.mrna1;Target=FBgn0029173.2 305 405 +
Chr1	stalkie_big_nohaplotig	exon	17837181	17837358	100	-	.	Parent=FBgn0029173.2.mrna1;Target=FBgn0029173.2 127 304 +
Chr1	stalkie_big_nohaplotig	exon	17837968	17838085	100	-	.	Parent=FBgn0029173.2.mrna1;Target=FBgn0029173.2 9 126 +
Chr1	stalkie_big_nohaplotig	CDS	17835712	17836968	.	-	0	Parent=FBgn0029173.2.mrna1;Target=FBgn0029173.2 406 1662 +
Chr1	stalkie_big_nohaplotig	CDS	17837023	17837123	.	-	2	Parent=FBgn0029173.2.mrna1;Target=FBgn0029173.2 305 405 +
Chr1	stalkie_big_nohaplotig	CDS	17837181	17837358	.	-	0	Parent=FBgn0029173.2.mrna1;Target=FBgn0029173.2 127 304 +
Chr1	stalkie_big_nohaplotig	CDS	17837968	17838084	.	-	0	Parent=FBgn0029173.2.mrna1;Target=FBgn0029173.2 10 126 +
Chr1	gffcl	locus	17872910	17873752	.	-	.	ID=RLOC_00006199;geneIDs=comp157112_c0_seq1.path1;transcripts=comp157112_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17872910	17873752	.	-	.	ID=comp157112_c0_seq1.mrna1;geneID=comp157112_c0_seq1.path1;Name=comp157112_c0_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=774;mismatches=7;indels=0;unknowns=0;locus=RLOC_00006199
Chr1	stalkie_big_nohaplotig	exon	17872910	17873481	99	-	.	Parent=comp157112_c0_seq1.mrna1;Target=comp157112_c0_seq1 1 572 -
Chr1	stalkie_big_nohaplotig	exon	17873544	17873752	97	-	.	Parent=comp157112_c0_seq1.mrna1;Target=comp157112_c0_seq1 573 781 -
Chr1	stalkie_big_nohaplotig	CDS	17873035	17873481	.	-	0	Parent=comp157112_c0_seq1.mrna1;Target=comp157112_c0_seq1 126 572 .
Chr1	stalkie_big_nohaplotig	CDS	17873544	17873555	.	-	0	Parent=comp157112_c0_seq1.mrna1;Target=comp157112_c0_seq1 573 584 .
Chr1	gffcl	locus	17877163	17878194	.	+	.	ID=RLOC_00006200;geneIDs=comp146446_c0_seq1.path1,comp175945_c0_seq1.path1;transcripts=comp146446_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17877163	17878013	.	+	.	ID=comp146446_c0_seq1.mrna1;geneID=comp146446_c0_seq1.path1;Name=comp146446_c0_seq1;Dir=antisensecoverage=97.4;identity=99.9;matches=780;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006200
Chr1	stalkie_big_nohaplotig	exon	17877163	17877443	100	+	.	Parent=comp146446_c0_seq1.mrna1;Target=comp146446_c0_seq1 522 802 -
Chr1	stalkie_big_nohaplotig	exon	17877514	17878013	99	+	.	Parent=comp146446_c0_seq1.mrna1;Target=comp146446_c0_seq1 22 521 -
Chr1	stalkie_big_nohaplotig	CDS	17877432	17877443	.	+	0	Parent=comp146446_c0_seq1.mrna1;Target=comp146446_c0_seq1 522 533 .
Chr1	stalkie_big_nohaplotig	CDS	17877514	17877897	.	+	0	Parent=comp146446_c0_seq1.mrna1;Target=comp146446_c0_seq1 138 521 .
Chr1	gffcl	locus	17879758	17880011	.	+	.	ID=RLOC_00006201;geneIDs=comp140436_c0_seq1.path1;transcripts=comp140436_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17879758	17880011	.	+	.	ID=comp140436_c0_seq1.mrna1;geneID=comp140436_c0_seq1.path1;Name=comp140436_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.8;matches=251;mismatches=3;indels=0;unknowns=0;Target=comp140436_c0_seq1 255 2 .;CDS_Target=comp140436_c0_seq1 253 167 .;locus=RLOC_00006201
Chr1	stalkie_big_nohaplotig	exon	17879758	17880011	98	+	.	Parent=comp140436_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	17879923	17880009	.	+	0	Parent=comp140436_c0_seq1.mrna1
Chr1	gffcl	locus	17885021	17885894	.	+	.	ID=RLOC_00006202;geneIDs=comp60263_c0_seq1.path1;transcripts=comp60263_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17885021	17885894	.	+	.	ID=comp60263_c0_seq1.mrna1;geneID=comp60263_c0_seq1.path1;Name=comp60263_c0_seq1;Dir=sensecoverage=97.4;identity=99.1;matches=791;mismatches=7;indels=0;unknowns=0;locus=RLOC_00006202
Chr1	stalkie_big_nohaplotig	exon	17885021	17885237	99	+	.	Parent=comp60263_c0_seq1.mrna1;Target=comp60263_c0_seq1 6 222 +
Chr1	stalkie_big_nohaplotig	exon	17885314	17885894	98	+	.	Parent=comp60263_c0_seq1.mrna1;Target=comp60263_c0_seq1 223 803 +
Chr1	stalkie_big_nohaplotig	CDS	17885226	17885237	.	+	0	Parent=comp60263_c0_seq1.mrna1;Target=comp60263_c0_seq1 211 222 +
Chr1	stalkie_big_nohaplotig	CDS	17885314	17885694	.	+	0	Parent=comp60263_c0_seq1.mrna1;Target=comp60263_c0_seq1 223 603 +
Chr1	gffcl	locus	17893486	17894319	.	+	.	ID=RLOC_00006203;geneIDs=comp151231_c0_seq1.path1;transcripts=comp151231_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17893486	17894319	.	+	.	ID=comp151231_c0_seq1.mrna1;geneID=comp151231_c0_seq1.path1;Name=comp151231_c0_seq1;Dir=sensecoverage=99.9;identity=99.9;matches=714;mismatches=0;indels=1;unknowns=0;locus=RLOC_00006203
Chr1	stalkie_big_nohaplotig	exon	17893486	17893826	100	+	.	Parent=comp151231_c0_seq1.mrna1;Target=comp151231_c0_seq1 1 341 +
Chr1	stalkie_big_nohaplotig	exon	17893947	17894319	99	+	.	Parent=comp151231_c0_seq1.mrna1;Target=comp151231_c0_seq1 342 715 +
Chr1	stalkie_big_nohaplotig	CDS	17893815	17893826	.	+	0	Parent=comp151231_c0_seq1.mrna1;Target=comp151231_c0_seq1 330 341 +
Chr1	stalkie_big_nohaplotig	CDS	17893947	17894002	.	+	0	Parent=comp151231_c0_seq1.mrna1;Target=comp151231_c0_seq1 342 398 +
Chr1	gffcl	locus	17906029	17907580	.	+	.	ID=RLOC_00006204;geneIDs=comp116094_c0_seq1.path1;transcripts=comp116094_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17906029	17907580	.	+	.	ID=comp116094_c0_seq1.mrna1;geneID=comp116094_c0_seq1.path1;Name=comp116094_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=634;mismatches=6;indels=1;unknowns=0;locus=RLOC_00006204
Chr1	stalkie_big_nohaplotig	exon	17906029	17906131	98	+	.	Parent=comp116094_c0_seq1.mrna1;Target=comp116094_c0_seq1 539 641 -
Chr1	stalkie_big_nohaplotig	exon	17907044	17907580	99	+	.	Parent=comp116094_c0_seq1.mrna1;Target=comp116094_c0_seq1 1 538 -
Chr1	stalkie_big_nohaplotig	CDS	17906120	17906131	.	+	0	Parent=comp116094_c0_seq1.mrna1;Target=comp116094_c0_seq1 539 550 .
Chr1	stalkie_big_nohaplotig	CDS	17907044	17907385	.	+	0	Parent=comp116094_c0_seq1.mrna1;Target=comp116094_c0_seq1 197 538 .
Chr1	gffcl	locus	17922384	17922877	.	-	.	ID=RLOC_00006205;geneIDs=FBgn0036605.1.path1;transcripts=FBgn0036605.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17922384	17922877	.	-	.	ID=FBgn0036605.1.mrna1;geneID=FBgn0036605.1.path1;Name=FBgn0036605.1;Dir=sensecoverage=99.1;identity=97.7;matches=424;mismatches=10;indels=0;unknowns=0;locus=RLOC_00006205
Chr1	stalkie_big_nohaplotig	exon	17922384	17922760	97	-	.	Parent=FBgn0036605.1.mrna1;Target=FBgn0036605.1 58 434 +
Chr1	stalkie_big_nohaplotig	exon	17922821	17922877	100	-	.	Parent=FBgn0036605.1.mrna1;Target=FBgn0036605.1 1 57 +
Chr1	stalkie_big_nohaplotig	CDS	17922386	17922760	.	-	0	Parent=FBgn0036605.1.mrna1;Target=FBgn0036605.1 58 432 +
Chr1	stalkie_big_nohaplotig	CDS	17922821	17922877	.	-	0	Parent=FBgn0036605.1.mrna1;Target=FBgn0036605.1 1 57 +
Chr1	gffcl	locus	17923682	17924064	.	+	.	ID=RLOC_00006206;geneIDs=comp130379_c0_seq1.path1;transcripts=comp130379_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17923682	17924064	.	+	.	ID=comp130379_c0_seq1.mrna1;geneID=comp130379_c0_seq1.path1;Name=comp130379_c0_seq1;Dir=indeterminatecoverage=98.0;identity=100.0;matches=383;mismatches=0;indels=0;unknowns=0;Target=comp130379_c0_seq1 383 1 .;CDS_Target=comp130379_c0_seq1 304 2 .;locus=RLOC_00006206
Chr1	stalkie_big_nohaplotig	exon	17923682	17924064	100	+	.	Parent=comp130379_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	17923683	17923985	.	+	0	Parent=comp130379_c0_seq1.mrna1
Chr1	gffcl	locus	17934635	17937274	.	+	.	ID=RLOC_00006207;geneIDs=FBgn0036620.1.path1;transcripts=FBgn0036620.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17934635	17937274	.	+	.	ID=FBgn0036620.1.mrna1;geneID=FBgn0036620.1.path1;Name=FBgn0036620.1;Dir=sensecoverage=96.2;identity=98.9;matches=648;mismatches=7;indels=0;unknowns=0;locus=RLOC_00006207
Chr1	stalkie_big_nohaplotig	exon	17934635	17934741	98	+	.	Parent=FBgn0036620.1.mrna1;Target=FBgn0036620.1 14 120 +
Chr1	stalkie_big_nohaplotig	exon	17934808	17935038	97	+	.	Parent=FBgn0036620.1.mrna1;Target=FBgn0036620.1 121 351 +
Chr1	stalkie_big_nohaplotig	exon	17936885	17937058	100	+	.	Parent=FBgn0036620.1.mrna1;Target=FBgn0036620.1 352 525 +
Chr1	stalkie_big_nohaplotig	exon	17937132	17937274	100	+	.	Parent=FBgn0036620.1.mrna1;Target=FBgn0036620.1 526 668 +
Chr1	stalkie_big_nohaplotig	CDS	17934637	17934741	.	+	0	Parent=FBgn0036620.1.mrna1;Target=FBgn0036620.1 16 120 +
Chr1	stalkie_big_nohaplotig	CDS	17934808	17935038	.	+	0	Parent=FBgn0036620.1.mrna1;Target=FBgn0036620.1 121 351 +
Chr1	stalkie_big_nohaplotig	CDS	17936885	17937058	.	+	0	Parent=FBgn0036620.1.mrna1;Target=FBgn0036620.1 352 525 +
Chr1	stalkie_big_nohaplotig	CDS	17937132	17937272	.	+	0	Parent=FBgn0036620.1.mrna1;Target=FBgn0036620.1 526 666 +
Chr1	gffcl	locus	17935711	17956732	.	-	.	ID=RLOC_00006208;geneIDs=comp160620_c0_seq1.path1;transcripts=comp160620_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17935711	17956732	.	-	.	ID=comp160620_c0_seq1.mrna1;geneID=comp160620_c0_seq1.path1;Name=comp160620_c0_seq1;Dir=indeterminatecoverage=96.9;identity=99.3;matches=1053;mismatches=6;indels=1;unknowns=0;Target=comp160620_c0_seq1 613 488 .;locus=RLOC_00006208
Chr1	stalkie_big_nohaplotig	exon	17935711	17936755	99	-	.	Parent=comp160620_c0_seq1.mrna1;Target=comp160620_c0_seq1 1094 49 .
Chr1	stalkie_big_nohaplotig	exon	17950425	17950431	100	-	.	Parent=comp160620_c0_seq1.mrna1;Target=comp160620_c0_seq1 48 42 .
Chr1	stalkie_big_nohaplotig	exon	17956726	17956732	100	-	.	Parent=comp160620_c0_seq1.mrna1;Target=comp160620_c0_seq1 41 35 .
Chr1	stalkie_big_nohaplotig	CDS	17936191	17936316	.	-	0	Parent=comp160620_c0_seq1.mrna1
Chr1	gffcl	locus	17937637	17938408	.	.	.	ID=RLOC_00006209;geneIDs=comp142711_c0_seq1.path1,comp144919_c0_seq1.path1;transcripts=comp142711_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17937637	17938119	.	+	.	ID=comp142711_c0_seq1.mrna1;geneID=comp142711_c0_seq1.path1;Name=comp142711_c0_seq1;Dir=antisensecoverage=100.0;identity=98.3;matches=411;mismatches=7;indels=0;unknowns=0;locus=RLOC_00006209
Chr1	stalkie_big_nohaplotig	exon	17937637	17937815	98	+	.	Parent=comp142711_c0_seq1.mrna1;Target=comp142711_c0_seq1 240 418 -
Chr1	stalkie_big_nohaplotig	exon	17937881	17938119	97	+	.	Parent=comp142711_c0_seq1.mrna1;Target=comp142711_c0_seq1 1 239 -
Chr1	stalkie_big_nohaplotig	CDS	17937804	17937815	.	+	0	Parent=comp142711_c0_seq1.mrna1;Target=comp142711_c0_seq1 240 251 .
Chr1	stalkie_big_nohaplotig	CDS	17937881	17938117	.	+	0	Parent=comp142711_c0_seq1.mrna1;Target=comp142711_c0_seq1 3 239 .
Chr1	gffcl	locus	17946460	17946515	.	-	.	ID=RLOC_00006210;geneIDs=comp155430_c0_seq1.path2;transcripts=comp155430_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	17946460	17946515	.	-	.	ID=comp155430_c0_seq1.mrna2;geneID=comp155430_c0_seq1.path2;Name=comp155430_c0_seq1;Dir=indeterminatecoverage=7.3;identity=100.0;matches=56;mismatches=0;indels=0;unknowns=0;Target=comp155430_c0_seq1 768 713 .;CDS_Target=comp155430_c0_seq1 766 713 .;locus=RLOC_00006210
Chr1	stalkie_big_nohaplotig	exon	17946460	17946515	100	-	.	Parent=comp155430_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	17946462	17946515	.	-	0	Parent=comp155430_c0_seq1.mrna2
Chr1	gffcl	locus	17949305	17950016	.	+	.	ID=RLOC_00006211;geneIDs=comp155430_c0_seq1.path1;transcripts=comp155430_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17949305	17950016	.	+	.	ID=comp155430_c0_seq1.mrna1;geneID=comp155430_c0_seq1.path1;Name=comp155430_c0_seq1;Dir=indeterminatecoverage=92.7;identity=97.5;matches=694;mismatches=18;indels=0;unknowns=0;Target=comp155430_c0_seq1 712 1 .;CDS_Target=comp155430_c0_seq1 712 470 .;locus=RLOC_00006211
Chr1	stalkie_big_nohaplotig	exon	17949305	17950016	97	+	.	Parent=comp155430_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	17949774	17950016	.	+	0	Parent=comp155430_c0_seq1.mrna1
Chr1	gffcl	locus	17954172	17954693	.	-	.	ID=RLOC_00006212;geneIDs=comp117775_c0_seq1.path1;transcripts=comp117775_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17954172	17954693	.	-	.	ID=comp117775_c0_seq1.mrna1;geneID=comp117775_c0_seq1.path1;Name=comp117775_c0_seq1;Dir=antisensecoverage=100.0;identity=99.0;matches=412;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006212
Chr1	stalkie_big_nohaplotig	exon	17954172	17954496	98	-	.	Parent=comp117775_c0_seq1.mrna1;Target=comp117775_c0_seq1 1 325 -
Chr1	stalkie_big_nohaplotig	exon	17954603	17954693	100	-	.	Parent=comp117775_c0_seq1.mrna1;Target=comp117775_c0_seq1 326 416 -
Chr1	stalkie_big_nohaplotig	CDS	17954212	17954496	.	-	0	Parent=comp117775_c0_seq1.mrna1;Target=comp117775_c0_seq1 41 325 .
Chr1	stalkie_big_nohaplotig	CDS	17954603	17954692	.	-	0	Parent=comp117775_c0_seq1.mrna1;Target=comp117775_c0_seq1 326 415 .
Chr1	gffcl	locus	17962050	17962396	.	+	.	ID=RLOC_00006213;geneIDs=comp143541_c0_seq1.path1;transcripts=comp143541_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17962050	17962396	.	+	.	ID=comp143541_c0_seq1.mrna1;geneID=comp143541_c0_seq1.path1;Name=comp143541_c0_seq1;Dir=indeterminatecoverage=95.1;identity=99.1;matches=344;mismatches=3;indels=0;unknowns=0;Target=comp143541_c0_seq1 347 1 .;CDS_Target=comp143541_c0_seq1 68 3 .;locus=RLOC_00006213
Chr1	stalkie_big_nohaplotig	exon	17962050	17962396	99	+	.	Parent=comp143541_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	17962052	17962117	.	+	0	Parent=comp143541_c0_seq1.mrna1
Chr1	gffcl	locus	17992274	18000762	.	+	.	ID=RLOC_00006214;geneIDs=FBgn0036612.1.path1;transcripts=FBgn0036612.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	17992274	18000762	.	+	.	ID=FBgn0036612.1.mrna1;geneID=FBgn0036612.1.path1;Name=FBgn0036612.1;Dir=sensecoverage=100.0;identity=99.8;matches=2729;mismatches=4;indels=1;unknowns=0;Target=FBgn0036612.1 2 55 +;locus=RLOC_00006214
Chr1	stalkie_big_nohaplotig	exon	17992274	17992398	99	+	.	Parent=FBgn0036612.1.mrna1;Target=FBgn0036612.1 1 124 +
Chr1	stalkie_big_nohaplotig	exon	17996210	17997921	99	+	.	Parent=FBgn0036612.1.mrna1;Target=FBgn0036612.1 125 1836 +
Chr1	stalkie_big_nohaplotig	exon	17999803	18000098	100	+	.	Parent=FBgn0036612.1.mrna1;Target=FBgn0036612.1 1837 2132 +
Chr1	stalkie_big_nohaplotig	exon	18000162	18000762	100	+	.	Parent=FBgn0036612.1.mrna1;Target=FBgn0036612.1 2133 2733 +
Chr1	stalkie_big_nohaplotig	CDS	17992275	17992329	.	+	0	Parent=FBgn0036612.1.mrna1
Chr1	gffcl	locus	18002682	18003323	.	+	.	ID=RLOC_00006215;geneIDs=FBgn0260460.1.path1;transcripts=FBgn0260460.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18002682	18003323	.	+	.	ID=FBgn0260460.1.mrna1;geneID=FBgn0260460.1.path1;Name=FBgn0260460.1;Dir=sensecoverage=100.0;identity=99.1;matches=565;mismatches=5;indels=0;unknowns=0;locus=RLOC_00006215
Chr1	stalkie_big_nohaplotig	exon	18002682	18002885	99	+	.	Parent=FBgn0260460.1.mrna1;Target=FBgn0260460.1 1 204 +
Chr1	stalkie_big_nohaplotig	exon	18002958	18003323	99	+	.	Parent=FBgn0260460.1.mrna1;Target=FBgn0260460.1 205 570 +
Chr1	stalkie_big_nohaplotig	CDS	18002682	18002885	.	+	0	Parent=FBgn0260460.1.mrna1;Target=FBgn0260460.1 1 204 +
Chr1	stalkie_big_nohaplotig	CDS	18002958	18003323	.	+	0	Parent=FBgn0260460.1.mrna1;Target=FBgn0260460.1 205 570 +
Chr1	gffcl	locus	18003529	18007843	.	-	.	ID=RLOC_00006216;geneIDs=FBgn0036614.1.path1;transcripts=FBgn0036614.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18003529	18007843	.	-	.	ID=FBgn0036614.1.mrna1;geneID=FBgn0036614.1.path1;Name=FBgn0036614.1;Dir=sensecoverage=100.0;identity=99.1;matches=2479;mismatches=23;indels=0;unknowns=0;locus=RLOC_00006216
Chr1	stalkie_big_nohaplotig	exon	18003529	18003600	100	-	.	Parent=FBgn0036614.1.mrna1;Target=FBgn0036614.1 2431 2502 +
Chr1	stalkie_big_nohaplotig	exon	18003721	18004077	99	-	.	Parent=FBgn0036614.1.mrna1;Target=FBgn0036614.1 2074 2430 +
Chr1	stalkie_big_nohaplotig	exon	18004141	18004632	99	-	.	Parent=FBgn0036614.1.mrna1;Target=FBgn0036614.1 1582 2073 +
Chr1	stalkie_big_nohaplotig	exon	18005904	18006084	98	-	.	Parent=FBgn0036614.1.mrna1;Target=FBgn0036614.1 1401 1581 +
Chr1	stalkie_big_nohaplotig	exon	18006158	18006300	98	-	.	Parent=FBgn0036614.1.mrna1;Target=FBgn0036614.1 1258 1400 +
Chr1	stalkie_big_nohaplotig	exon	18006364	18006518	98	-	.	Parent=FBgn0036614.1.mrna1;Target=FBgn0036614.1 1103 1257 +
Chr1	stalkie_big_nohaplotig	exon	18006576	18006639	100	-	.	Parent=FBgn0036614.1.mrna1;Target=FBgn0036614.1 1039 1102 +
Chr1	stalkie_big_nohaplotig	exon	18006697	18006816	97	-	.	Parent=FBgn0036614.1.mrna1;Target=FBgn0036614.1 919 1038 +
Chr1	stalkie_big_nohaplotig	exon	18006870	18007082	99	-	.	Parent=FBgn0036614.1.mrna1;Target=FBgn0036614.1 706 918 +
Chr1	stalkie_big_nohaplotig	exon	18007139	18007843	98	-	.	Parent=FBgn0036614.1.mrna1;Target=FBgn0036614.1 1 705 +
Chr1	stalkie_big_nohaplotig	CDS	18003529	18003600	.	-	0	Parent=FBgn0036614.1.mrna1;Target=FBgn0036614.1 2431 2502 +
Chr1	stalkie_big_nohaplotig	CDS	18003721	18004077	.	-	0	Parent=FBgn0036614.1.mrna1;Target=FBgn0036614.1 2074 2430 +
Chr1	stalkie_big_nohaplotig	CDS	18004141	18004632	.	-	0	Parent=FBgn0036614.1.mrna1;Target=FBgn0036614.1 1582 2073 +
Chr1	stalkie_big_nohaplotig	CDS	18005904	18006084	.	-	1	Parent=FBgn0036614.1.mrna1;Target=FBgn0036614.1 1401 1581 +
Chr1	stalkie_big_nohaplotig	CDS	18006158	18006300	.	-	0	Parent=FBgn0036614.1.mrna1;Target=FBgn0036614.1 1258 1400 +
Chr1	stalkie_big_nohaplotig	CDS	18006364	18006518	.	-	2	Parent=FBgn0036614.1.mrna1;Target=FBgn0036614.1 1103 1257 +
Chr1	stalkie_big_nohaplotig	CDS	18006576	18006639	.	-	0	Parent=FBgn0036614.1.mrna1;Target=FBgn0036614.1 1039 1102 +
Chr1	stalkie_big_nohaplotig	CDS	18006697	18006816	.	-	0	Parent=FBgn0036614.1.mrna1;Target=FBgn0036614.1 919 1038 +
Chr1	stalkie_big_nohaplotig	CDS	18006870	18007082	.	-	0	Parent=FBgn0036614.1.mrna1;Target=FBgn0036614.1 706 918 +
Chr1	stalkie_big_nohaplotig	CDS	18007139	18007843	.	-	0	Parent=FBgn0036614.1.mrna1;Target=FBgn0036614.1 1 705 +
Chr1	gffcl	locus	18008254	18009470	.	+	.	ID=RLOC_00006217;geneIDs=FBgn0036615.1.path1;transcripts=FBgn0036615.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18008254	18009470	.	+	.	ID=FBgn0036615.1.mrna1;geneID=FBgn0036615.1.path1;Name=FBgn0036615.1;Dir=sensecoverage=100.0;identity=99.7;matches=1050;mismatches=3;indels=0;unknowns=0;locus=RLOC_00006217
Chr1	stalkie_big_nohaplotig	exon	18008254	18008380	100	+	.	Parent=FBgn0036615.1.mrna1;Target=FBgn0036615.1 1 127 +
Chr1	stalkie_big_nohaplotig	exon	18008434	18008913	100	+	.	Parent=FBgn0036615.1.mrna1;Target=FBgn0036615.1 128 607 +
Chr1	stalkie_big_nohaplotig	exon	18008970	18009175	99	+	.	Parent=FBgn0036615.1.mrna1;Target=FBgn0036615.1 608 813 +
Chr1	stalkie_big_nohaplotig	exon	18009231	18009470	99	+	.	Parent=FBgn0036615.1.mrna1;Target=FBgn0036615.1 814 1053 +
Chr1	stalkie_big_nohaplotig	CDS	18008254	18008380	.	+	0	Parent=FBgn0036615.1.mrna1;Target=FBgn0036615.1 1 127 +
Chr1	stalkie_big_nohaplotig	CDS	18008434	18008913	.	+	2	Parent=FBgn0036615.1.mrna1;Target=FBgn0036615.1 128 607 +
Chr1	stalkie_big_nohaplotig	CDS	18008970	18009175	.	+	2	Parent=FBgn0036615.1.mrna1;Target=FBgn0036615.1 608 813 +
Chr1	stalkie_big_nohaplotig	CDS	18009231	18009470	.	+	0	Parent=FBgn0036615.1.mrna1;Target=FBgn0036615.1 814 1053 +
Chr1	gffcl	locus	18010369	18011690	.	-	.	ID=RLOC_00006218;geneIDs=FBgn0011693.1.path1;transcripts=FBgn0011693.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18010369	18011690	.	-	.	ID=FBgn0011693.1.mrna1;geneID=FBgn0011693.1.path1;Name=FBgn0011693.1;Dir=sensecoverage=100.0;identity=99.4;matches=921;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006218
Chr1	stalkie_big_nohaplotig	exon	18010369	18010662	99	-	.	Parent=FBgn0011693.1.mrna1;Target=FBgn0011693.1 634 927 +
Chr1	stalkie_big_nohaplotig	exon	18010936	18011109	98	-	.	Parent=FBgn0011693.1.mrna1;Target=FBgn0011693.1 460 633 +
Chr1	stalkie_big_nohaplotig	exon	18011170	18011397	99	-	.	Parent=FBgn0011693.1.mrna1;Target=FBgn0011693.1 232 459 +
Chr1	stalkie_big_nohaplotig	exon	18011460	18011690	99	-	.	Parent=FBgn0011693.1.mrna1;Target=FBgn0011693.1 1 231 +
Chr1	stalkie_big_nohaplotig	CDS	18010369	18010662	.	-	0	Parent=FBgn0011693.1.mrna1;Target=FBgn0011693.1 634 927 +
Chr1	stalkie_big_nohaplotig	CDS	18010936	18011109	.	-	0	Parent=FBgn0011693.1.mrna1;Target=FBgn0011693.1 460 633 +
Chr1	stalkie_big_nohaplotig	CDS	18011170	18011397	.	-	0	Parent=FBgn0011693.1.mrna1;Target=FBgn0011693.1 232 459 +
Chr1	stalkie_big_nohaplotig	CDS	18011460	18011690	.	-	0	Parent=FBgn0011693.1.mrna1;Target=FBgn0011693.1 1 231 +
Chr1	gffcl	locus	18015240	18015893	.	-	.	ID=RLOC_00006219;geneIDs=FBgn0036616.1.path2;transcripts=FBgn0036616.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	18015240	18015893	.	-	.	ID=FBgn0036616.1.mrna2;geneID=FBgn0036616.1.path2;Name=FBgn0036616.1;Dir=sensecoverage=96.2;identity=99.3;matches=576;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006219
Chr1	stalkie_big_nohaplotig	exon	18015240	18015419	98	-	.	Parent=FBgn0036616.1.mrna2;Target=FBgn0036616.1 424 603 +
Chr1	stalkie_big_nohaplotig	exon	18015494	18015893	99	-	.	Parent=FBgn0036616.1.mrna2;Target=FBgn0036616.1 24 423 +
Chr1	stalkie_big_nohaplotig	CDS	18015240	18015419	.	-	0	Parent=FBgn0036616.1.mrna2;Target=FBgn0036616.1 424 603 +
Chr1	stalkie_big_nohaplotig	CDS	18015494	18015892	.	-	0	Parent=FBgn0036616.1.mrna2;Target=FBgn0036616.1 25 423 +
Chr1	gffcl	locus	18015919	18019917	.	-	.	ID=RLOC_00006220;geneIDs=comp152486_c0_seq1.path1;transcripts=comp152486_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18015919	18019917	.	-	.	ID=comp152486_c0_seq1.mrna1;geneID=comp152486_c0_seq1.path1;Name=comp152486_c0_seq1;Dir=antisensecoverage=96.9;identity=97.4;matches=480;mismatches=6;indels=7;unknowns=0;Target=comp152486_c0_seq1 423 506 .;locus=RLOC_00006220
Chr1	stalkie_big_nohaplotig	exon	18015919	18016305	96	-	.	Parent=comp152486_c0_seq1.mrna1;Target=comp152486_c0_seq1 17 408 -
Chr1	stalkie_big_nohaplotig	exon	18019818	18019917	99	-	.	Parent=comp152486_c0_seq1.mrna1;Target=comp152486_c0_seq1 409 508 -
Chr1	stalkie_big_nohaplotig	CDS	18019832	18019915	.	-	0	Parent=comp152486_c0_seq1.mrna1
Chr1	gffcl	locus	18016789	18238309	.	.	.	ID=RLOC_00006221;geneIDs=comp147133_c0_seq1.path1,comp154049_c1_seq1.path1,comp162742_c4_seq1.path1;transcripts=comp154049_c1_seq1.mrna1,comp162742_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18016789	18238309	.	-	.	ID=comp154049_c1_seq1.mrna1;geneID=comp154049_c1_seq1.path1;Name=comp154049_c1_seq1;Dir=antisensecoverage=77.2;identity=97.5;matches=433;mismatches=8;indels=3;unknowns=0;locus=RLOC_00006221
Chr1	stalkie_big_nohaplotig	exon	18016789	18017154	99	-	.	Parent=comp154049_c1_seq1.mrna1;Target=comp154049_c1_seq1 1 366 -
Chr1	stalkie_big_nohaplotig	exon	18145050	18145056	85	-	.	Parent=comp154049_c1_seq1.mrna1;Target=comp154049_c1_seq1 367 373 -
Chr1	stalkie_big_nohaplotig	exon	18159174	18159182	100	-	.	Parent=comp154049_c1_seq1.mrna1;Target=comp154049_c1_seq1 374 382 -
Chr1	stalkie_big_nohaplotig	exon	18177461	18177483	73	-	.	Parent=comp154049_c1_seq1.mrna1;Target=comp154049_c1_seq1 431 450 -
Chr1	stalkie_big_nohaplotig	exon	18185649	18185654	100	-	.	Parent=comp154049_c1_seq1.mrna1;Target=comp154049_c1_seq1 451 456 -
Chr1	stalkie_big_nohaplotig	exon	18190370	18190372	100	-	.	Parent=comp154049_c1_seq1.mrna1;Target=comp154049_c1_seq1 457 459 -
Chr1	stalkie_big_nohaplotig	exon	18206953	18206959	100	-	.	Parent=comp154049_c1_seq1.mrna1;Target=comp154049_c1_seq1 460 466 -
Chr1	stalkie_big_nohaplotig	exon	18213709	18213711	100	-	.	Parent=comp154049_c1_seq1.mrna1;Target=comp154049_c1_seq1 467 469 -
Chr1	stalkie_big_nohaplotig	exon	18226445	18226448	100	-	.	Parent=comp154049_c1_seq1.mrna1;Target=comp154049_c1_seq1 470 473 -
Chr1	stalkie_big_nohaplotig	exon	18233050	18233055	100	-	.	Parent=comp154049_c1_seq1.mrna1;Target=comp154049_c1_seq1 474 479 -
Chr1	stalkie_big_nohaplotig	exon	18238301	18238309	88	-	.	Parent=comp154049_c1_seq1.mrna1;Target=comp154049_c1_seq1 480 488 -
Chr1	stalkie_big_nohaplotig	CDS	18177472	18177483	.	-	0	Parent=comp154049_c1_seq1.mrna1;Target=comp154049_c1_seq1 442 450 .
Chr1	stalkie_big_nohaplotig	CDS	18185649	18185654	.	-	0	Parent=comp154049_c1_seq1.mrna1;Target=comp154049_c1_seq1 451 456 .
Chr1	stalkie_big_nohaplotig	CDS	18190370	18190372	.	-	0	Parent=comp154049_c1_seq1.mrna1;Target=comp154049_c1_seq1 457 459 .
Chr1	stalkie_big_nohaplotig	CDS	18206953	18206959	.	-	1	Parent=comp154049_c1_seq1.mrna1;Target=comp154049_c1_seq1 460 466 .
Chr1	stalkie_big_nohaplotig	CDS	18213709	18213711	.	-	1	Parent=comp154049_c1_seq1.mrna1;Target=comp154049_c1_seq1 467 469 .
Chr1	stalkie_big_nohaplotig	CDS	18226445	18226448	.	-	2	Parent=comp154049_c1_seq1.mrna1;Target=comp154049_c1_seq1 470 473 .
Chr1	stalkie_big_nohaplotig	CDS	18233050	18233055	.	-	2	Parent=comp154049_c1_seq1.mrna1;Target=comp154049_c1_seq1 474 479 .
Chr1	stalkie_big_nohaplotig	CDS	18238301	18238307	.	-	0	Parent=comp154049_c1_seq1.mrna1;Target=comp154049_c1_seq1 480 486 .
Chr1	stalkie_big_nohaplotig	mRNA	18212159	18214062	.	-	.	ID=comp162742_c4_seq1.mrna1;geneID=comp162742_c4_seq1.path1;Name=comp162742_c4_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=1874;mismatches=28;indels=12;unknowns=0;Target=comp162742_c4_seq1 1912 1 .;CDS_Target=comp162742_c4_seq1 166 2 .;locus=RLOC_00006221
Chr1	stalkie_big_nohaplotig	exon	18212159	18214062	97	-	.	Parent=comp162742_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	18213897	18214061	.	-	0	Parent=comp162742_c4_seq1.mrna1
Chr1	gffcl	locus	18017927	18018650	.	+	.	ID=RLOC_00006222;geneIDs=comp146889_c0_seq1.path1;transcripts=comp146889_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18017927	18018650	.	+	.	ID=comp146889_c0_seq1.mrna1;geneID=comp146889_c0_seq1.path1;Name=comp146889_c0_seq1;Dir=indeterminatecoverage=93.2;identity=94.2;matches=682;mismatches=15;indels=27;unknowns=0;Target=comp146889_c0_seq1 697 1 .;CDS_Target=comp146889_c0_seq1 311 159 .;locus=RLOC_00006222
Chr1	stalkie_big_nohaplotig	exon	18017927	18018650	94	+	.	Parent=comp146889_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	18018085	18018237	.	+	0	Parent=comp146889_c0_seq1.mrna1
Chr1	gffcl	locus	18023839	18024002	.	-	.	ID=RLOC_00006223;geneIDs=comp143363_c0_seq1.path1;transcripts=comp143363_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18023839	18024002	.	-	.	ID=comp143363_c0_seq1.mrna1;geneID=comp143363_c0_seq1.path1;Name=comp143363_c0_seq1;Dir=indeterminatecoverage=54.0;identity=84.1;matches=138;mismatches=10;indels=16;unknowns=0;Target=comp143363_c0_seq1 251 104 .;CDS_Target=comp143363_c0_seq1 165 106 .;locus=RLOC_00006223
Chr1	stalkie_big_nohaplotig	exon	18023839	18024002	84	-	.	Parent=comp143363_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	18023941	18024000	.	-	0	Parent=comp143363_c0_seq1.mrna1
Chr1	gffcl	locus	18024062	18025548	.	+	.	ID=RLOC_00006224;geneIDs=comp162362_c1_seq1.path1;transcripts=comp162362_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18024062	18025548	.	+	.	ID=comp162362_c1_seq1.mrna1;geneID=comp162362_c1_seq1.path1;Name=comp162362_c1_seq1;Dir=indeterminatecoverage=95.8;identity=96.1;matches=1448;mismatches=26;indels=33;unknowns=0;Target=comp162362_c1_seq1 297 232 .;locus=RLOC_00006224
Chr1	stalkie_big_nohaplotig	exon	18024062	18024280	95	+	.	Parent=comp162362_c1_seq1.mrna1;Target=comp162362_c1_seq1 297 76 .
Chr1	stalkie_big_nohaplotig	exon	18024294	18025548	96	+	.	Parent=comp162362_c1_seq1.mrna1;Target=comp162362_c1_seq1 1768 484 .
Chr1	stalkie_big_nohaplotig	CDS	18024217	18024280	.	+	0	Parent=comp162362_c1_seq1.mrna1
Chr1	gffcl	locus	18026171	18026661	.	+	.	ID=RLOC_00006225;geneIDs=comp160091_c1_seq1.path1;transcripts=comp160091_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18026171	18026661	.	+	.	ID=comp160091_c1_seq1.mrna1;geneID=comp160091_c1_seq1.path1;Name=comp160091_c1_seq1;Dir=indeterminatecoverage=44.3;identity=100.0;matches=491;mismatches=0;indels=0;unknowns=0;Target=comp160091_c1_seq1 491 1 .;CDS_Target=comp160091_c1_seq1 140 45 .;locus=RLOC_00006225
Chr1	stalkie_big_nohaplotig	exon	18026171	18026661	100	+	.	Parent=comp160091_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	18026215	18026310	.	+	0	Parent=comp160091_c1_seq1.mrna1
Chr1	gffcl	locus	18028654	18029565	.	+	.	ID=RLOC_00006226;geneIDs=FBgn0000640.1.path1;transcripts=FBgn0000640.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18028654	18029565	.	+	.	ID=FBgn0000640.1.mrna1;geneID=FBgn0000640.1.path1;Name=FBgn0000640.1;Dir=sensecoverage=100.0;identity=100.0;matches=786;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006226
Chr1	stalkie_big_nohaplotig	exon	18028654	18028761	100	+	.	Parent=FBgn0000640.1.mrna1;Target=FBgn0000640.1 1 108 +
Chr1	stalkie_big_nohaplotig	exon	18028828	18029055	100	+	.	Parent=FBgn0000640.1.mrna1;Target=FBgn0000640.1 109 336 +
Chr1	stalkie_big_nohaplotig	exon	18029116	18029565	100	+	.	Parent=FBgn0000640.1.mrna1;Target=FBgn0000640.1 337 786 +
Chr1	stalkie_big_nohaplotig	CDS	18028654	18028761	.	+	0	Parent=FBgn0000640.1.mrna1;Target=FBgn0000640.1 1 108 +
Chr1	stalkie_big_nohaplotig	CDS	18028828	18029055	.	+	0	Parent=FBgn0000640.1.mrna1;Target=FBgn0000640.1 109 336 +
Chr1	stalkie_big_nohaplotig	CDS	18029116	18029565	.	+	0	Parent=FBgn0000640.1.mrna1;Target=FBgn0000640.1 337 786 +
Chr1	gffcl	locus	18030921	18031877	.	-	.	ID=RLOC_00006227;geneIDs=FBgn0036620.2.path1;transcripts=FBgn0036620.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18030921	18031877	.	-	.	ID=FBgn0036620.2.mrna1;geneID=FBgn0036620.2.path1;Name=FBgn0036620.2;Dir=sensecoverage=100.0;identity=99.5;matches=782;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006227
Chr1	stalkie_big_nohaplotig	exon	18030921	18031199	98	-	.	Parent=FBgn0036620.2.mrna1;Target=FBgn0036620.2 508 786 +
Chr1	stalkie_big_nohaplotig	exon	18031258	18031431	100	-	.	Parent=FBgn0036620.2.mrna1;Target=FBgn0036620.2 334 507 +
Chr1	stalkie_big_nohaplotig	exon	18031485	18031712	99	-	.	Parent=FBgn0036620.2.mrna1;Target=FBgn0036620.2 106 333 +
Chr1	stalkie_big_nohaplotig	exon	18031773	18031877	100	-	.	Parent=FBgn0036620.2.mrna1;Target=FBgn0036620.2 1 105 +
Chr1	stalkie_big_nohaplotig	CDS	18030921	18031199	.	-	0	Parent=FBgn0036620.2.mrna1;Target=FBgn0036620.2 508 786 +
Chr1	stalkie_big_nohaplotig	CDS	18031258	18031431	.	-	0	Parent=FBgn0036620.2.mrna1;Target=FBgn0036620.2 334 507 +
Chr1	stalkie_big_nohaplotig	CDS	18031485	18031712	.	-	0	Parent=FBgn0036620.2.mrna1;Target=FBgn0036620.2 106 333 +
Chr1	stalkie_big_nohaplotig	CDS	18031773	18031877	.	-	0	Parent=FBgn0036620.2.mrna1;Target=FBgn0036620.2 1 105 +
Chr1	gffcl	locus	18040634	18041330	.	-	.	ID=RLOC_00006228;geneIDs=comp157233_c0_seq1.path1;transcripts=comp157233_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18040634	18041330	.	-	.	ID=comp157233_c0_seq1.mrna1;geneID=comp157233_c0_seq1.path1;Name=comp157233_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=694;mismatches=3;indels=0;unknowns=0;Target=comp157233_c0_seq1 697 1 .;CDS_Target=comp157233_c0_seq1 457 332 .;locus=RLOC_00006228
Chr1	stalkie_big_nohaplotig	exon	18040634	18041330	99	-	.	Parent=comp157233_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	18040874	18040999	.	-	0	Parent=comp157233_c0_seq1.mrna1
Chr1	gffcl	locus	18048529	18049299	.	-	.	ID=RLOC_00006229;geneIDs=FBgn0036617.1.path1;transcripts=FBgn0036617.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18048529	18049299	.	-	.	ID=FBgn0036617.1.mrna1;geneID=FBgn0036617.1.path1;Name=FBgn0036617.1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=764;mismatches=7;indels=0;unknowns=0;Target=FBgn0036617.1 771 1 .;locus=RLOC_00006229
Chr1	stalkie_big_nohaplotig	exon	18048529	18049299	99	-	.	Parent=FBgn0036617.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	18048529	18049299	.	-	0	Parent=FBgn0036617.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18101500	18101814	.	+	.	ID=comp144980_c0_seq1.mrna1;geneID=comp144980_c0_seq1.path1;Name=comp144980_c0_seq1;Dir=sensecoverage=99.6;identity=93.4;matches=253;mismatches=7;indels=11;unknowns=0;Target=comp144980_c0_seq1 194 268 +;locus=RLOC_00006232
Chr1	stalkie_big_nohaplotig	exon	18101500	18101522	100	+	.	Parent=comp144980_c0_seq1.mrna1;Target=comp144980_c0_seq1 1 23 +
Chr1	stalkie_big_nohaplotig	exon	18101578	18101814	92	+	.	Parent=comp144980_c0_seq1.mrna1;Target=comp144980_c0_seq1 24 271 +
Chr1	stalkie_big_nohaplotig	CDS	18101737	18101811	.	+	0	Parent=comp144980_c0_seq1.mrna1
Chr1	gffcl	locus	18119293	18182573	.	+	.	ID=RLOC_00006233;geneIDs=ORF100.path2,comp150368_c0_seq1.path1,comp159217_c0_seq1.path1;transcripts=ORF100.mrna2,comp159217_c0_seq1.mrna1,comp150368_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18119293	18181197	.	+	.	ID=ORF100.mrna2;geneID=ORF100.path2;Name=ORF100;Dir=sensecoverage=97.2;identity=99.4;matches=2954;mismatches=17;indels=0;unknowns=0;locus=RLOC_00006233
Chr1	stalkie_big_nohaplotig	exon	18119293	18119352	100	+	.	Parent=ORF100.mrna2;Target=ORF100 79 138 +
Chr1	stalkie_big_nohaplotig	exon	18119421	18119468	100	+	.	Parent=ORF100.mrna2;Target=ORF100 139 186 +
Chr1	stalkie_big_nohaplotig	exon	18133895	18133936	100	+	.	Parent=ORF100.mrna2;Target=ORF100 187 228 +
Chr1	stalkie_big_nohaplotig	exon	18134009	18134050	97	+	.	Parent=ORF100.mrna2;Target=ORF100 229 270 +
Chr1	stalkie_big_nohaplotig	exon	18134907	18134969	100	+	.	Parent=ORF100.mrna2;Target=ORF100 271 333 +
Chr1	stalkie_big_nohaplotig	exon	18144601	18144663	95	+	.	Parent=ORF100.mrna2;Target=ORF100 334 396 +
Chr1	stalkie_big_nohaplotig	exon	18144746	18144829	100	+	.	Parent=ORF100.mrna2;Target=ORF100 397 480 +
Chr1	stalkie_big_nohaplotig	exon	18144913	18144951	100	+	.	Parent=ORF100.mrna2;Target=ORF100 481 519 +
Chr1	stalkie_big_nohaplotig	exon	18146286	18146342	98	+	.	Parent=ORF100.mrna2;Target=ORF100 520 576 +
Chr1	stalkie_big_nohaplotig	exon	18146617	18146646	100	+	.	Parent=ORF100.mrna2;Target=ORF100 577 606 +
Chr1	stalkie_big_nohaplotig	exon	18146707	18146736	100	+	.	Parent=ORF100.mrna2;Target=ORF100 607 636 +
Chr1	stalkie_big_nohaplotig	exon	18146794	18146844	100	+	.	Parent=ORF100.mrna2;Target=ORF100 637 687 +
Chr1	stalkie_big_nohaplotig	exon	18148569	18148586	100	+	.	Parent=ORF100.mrna2;Target=ORF100 688 705 +
Chr1	stalkie_big_nohaplotig	exon	18148649	18148663	100	+	.	Parent=ORF100.mrna2;Target=ORF100 706 720 +
Chr1	stalkie_big_nohaplotig	exon	18148736	18148756	100	+	.	Parent=ORF100.mrna2;Target=ORF100 721 741 +
Chr1	stalkie_big_nohaplotig	exon	18148812	18148838	96	+	.	Parent=ORF100.mrna2;Target=ORF100 742 768 +
Chr1	stalkie_big_nohaplotig	exon	18149620	18149652	100	+	.	Parent=ORF100.mrna2;Target=ORF100 769 801 +
Chr1	stalkie_big_nohaplotig	exon	18150103	18150126	100	+	.	Parent=ORF100.mrna2;Target=ORF100 802 825 +
Chr1	stalkie_big_nohaplotig	exon	18150185	18150208	100	+	.	Parent=ORF100.mrna2;Target=ORF100 826 849 +
Chr1	stalkie_big_nohaplotig	exon	18150265	18150288	100	+	.	Parent=ORF100.mrna2;Target=ORF100 850 873 +
Chr1	stalkie_big_nohaplotig	exon	18150348	18150371	100	+	.	Parent=ORF100.mrna2;Target=ORF100 874 897 +
Chr1	stalkie_big_nohaplotig	exon	18150427	18150453	100	+	.	Parent=ORF100.mrna2;Target=ORF100 898 924 +
Chr1	stalkie_big_nohaplotig	exon	18151953	18151994	100	+	.	Parent=ORF100.mrna2;Target=ORF100 925 966 +
Chr1	stalkie_big_nohaplotig	exon	18152745	18152783	100	+	.	Parent=ORF100.mrna2;Target=ORF100 967 1005 +
Chr1	stalkie_big_nohaplotig	exon	18153093	18153125	100	+	.	Parent=ORF100.mrna2;Target=ORF100 1006 1038 +
Chr1	stalkie_big_nohaplotig	exon	18153740	18153781	100	+	.	Parent=ORF100.mrna2;Target=ORF100 1039 1080 +
Chr1	stalkie_big_nohaplotig	exon	18154222	18154260	100	+	.	Parent=ORF100.mrna2;Target=ORF100 1081 1119 +
Chr1	stalkie_big_nohaplotig	exon	18154710	18154742	100	+	.	Parent=ORF100.mrna2;Target=ORF100 1120 1152 +
Chr1	stalkie_big_nohaplotig	exon	18155691	18155717	100	+	.	Parent=ORF100.mrna2;Target=ORF100 1153 1179 +
Chr1	stalkie_big_nohaplotig	exon	18156626	18156658	100	+	.	Parent=ORF100.mrna2;Target=ORF100 1180 1212 +
Chr1	stalkie_big_nohaplotig	exon	18157293	18157331	100	+	.	Parent=ORF100.mrna2;Target=ORF100 1213 1251 +
Chr1	stalkie_big_nohaplotig	exon	18159229	18159282	100	+	.	Parent=ORF100.mrna2;Target=ORF100 1252 1305 +
Chr1	stalkie_big_nohaplotig	exon	18159639	18159677	100	+	.	Parent=ORF100.mrna2;Target=ORF100 1306 1344 +
Chr1	stalkie_big_nohaplotig	exon	18161373	18161417	97	+	.	Parent=ORF100.mrna2;Target=ORF100 1345 1389 +
Chr1	stalkie_big_nohaplotig	exon	18161984	18162028	97	+	.	Parent=ORF100.mrna2;Target=ORF100 1390 1434 +
Chr1	stalkie_big_nohaplotig	exon	18162726	18162782	96	+	.	Parent=ORF100.mrna2;Target=ORF100 1435 1491 +
Chr1	stalkie_big_nohaplotig	exon	18164401	18164430	96	+	.	Parent=ORF100.mrna2;Target=ORF100 1492 1521 +
Chr1	stalkie_big_nohaplotig	exon	18164521	18164574	100	+	.	Parent=ORF100.mrna2;Target=ORF100 1522 1575 +
Chr1	stalkie_big_nohaplotig	exon	18164638	18164712	98	+	.	Parent=ORF100.mrna2;Target=ORF100 1576 1650 +
Chr1	stalkie_big_nohaplotig	exon	18164795	18164836	100	+	.	Parent=ORF100.mrna2;Target=ORF100 1651 1692 +
Chr1	stalkie_big_nohaplotig	exon	18164898	18164927	100	+	.	Parent=ORF100.mrna2;Target=ORF100 1693 1722 +
Chr1	stalkie_big_nohaplotig	exon	18166541	18166609	100	+	.	Parent=ORF100.mrna2;Target=ORF100 1723 1791 +
Chr1	stalkie_big_nohaplotig	exon	18166911	18166934	100	+	.	Parent=ORF100.mrna2;Target=ORF100 1792 1815 +
Chr1	stalkie_big_nohaplotig	exon	18167008	18167037	100	+	.	Parent=ORF100.mrna2;Target=ORF100 1816 1845 +
Chr1	stalkie_big_nohaplotig	exon	18167096	18167146	100	+	.	Parent=ORF100.mrna2;Target=ORF100 1846 1896 +
Chr1	stalkie_big_nohaplotig	exon	18167302	18167319	100	+	.	Parent=ORF100.mrna2;Target=ORF100 1897 1914 +
Chr1	stalkie_big_nohaplotig	exon	18167392	18167418	100	+	.	Parent=ORF100.mrna2;Target=ORF100 1915 1941 +
Chr1	stalkie_big_nohaplotig	exon	18169718	18169771	100	+	.	Parent=ORF100.mrna2;Target=ORF100 1942 1995 +
Chr1	stalkie_big_nohaplotig	exon	18169883	18169915	93	+	.	Parent=ORF100.mrna2;Target=ORF100 1996 2028 +
Chr1	stalkie_big_nohaplotig	exon	18170031	18170096	100	+	.	Parent=ORF100.mrna2;Target=ORF100 2029 2094 +
Chr1	stalkie_big_nohaplotig	exon	18170225	18170260	100	+	.	Parent=ORF100.mrna2;Target=ORF100 2095 2130 +
Chr1	stalkie_big_nohaplotig	exon	18170419	18170469	100	+	.	Parent=ORF100.mrna2;Target=ORF100 2131 2181 +
Chr1	stalkie_big_nohaplotig	exon	18170576	18170632	100	+	.	Parent=ORF100.mrna2;Target=ORF100 2182 2238 +
Chr1	stalkie_big_nohaplotig	exon	18170692	18170745	100	+	.	Parent=ORF100.mrna2;Target=ORF100 2239 2292 +
Chr1	stalkie_big_nohaplotig	exon	18170869	18170979	99	+	.	Parent=ORF100.mrna2;Target=ORF100 2293 2403 +
Chr1	stalkie_big_nohaplotig	exon	18171103	18171126	100	+	.	Parent=ORF100.mrna2;Target=ORF100 2404 2427 +
Chr1	stalkie_big_nohaplotig	exon	18172195	18172299	98	+	.	Parent=ORF100.mrna2;Target=ORF100 2428 2532 +
Chr1	stalkie_big_nohaplotig	exon	18174277	18174297	100	+	.	Parent=ORF100.mrna2;Target=ORF100 2533 2553 +
Chr1	stalkie_big_nohaplotig	exon	18175346	18175408	100	+	.	Parent=ORF100.mrna2;Target=ORF100 2554 2616 +
Chr1	stalkie_big_nohaplotig	exon	18175470	18175499	100	+	.	Parent=ORF100.mrna2;Target=ORF100 2617 2646 +
Chr1	stalkie_big_nohaplotig	exon	18175744	18175830	100	+	.	Parent=ORF100.mrna2;Target=ORF100 2647 2733 +
Chr1	stalkie_big_nohaplotig	exon	18177238	18177255	100	+	.	Parent=ORF100.mrna2;Target=ORF100 2734 2751 +
Chr1	stalkie_big_nohaplotig	exon	18178413	18178478	100	+	.	Parent=ORF100.mrna2;Target=ORF100 2752 2817 +
Chr1	stalkie_big_nohaplotig	exon	18178540	18178569	100	+	.	Parent=ORF100.mrna2;Target=ORF100 2818 2847 +
Chr1	stalkie_big_nohaplotig	exon	18179334	18179420	100	+	.	Parent=ORF100.mrna2;Target=ORF100 2848 2934 +
Chr1	stalkie_big_nohaplotig	exon	18180295	18180315	100	+	.	Parent=ORF100.mrna2;Target=ORF100 2935 2955 +
Chr1	stalkie_big_nohaplotig	exon	18180766	18180828	100	+	.	Parent=ORF100.mrna2;Target=ORF100 2956 3018 +
Chr1	stalkie_big_nohaplotig	exon	18181167	18181197	100	+	.	Parent=ORF100.mrna2;Target=ORF100 3019 3049 +
Chr1	stalkie_big_nohaplotig	CDS	18119293	18119352	.	+	0	Parent=ORF100.mrna2;Target=ORF100 79 138 +
Chr1	stalkie_big_nohaplotig	CDS	18119421	18119468	.	+	0	Parent=ORF100.mrna2;Target=ORF100 139 186 +
Chr1	stalkie_big_nohaplotig	CDS	18133895	18133936	.	+	0	Parent=ORF100.mrna2;Target=ORF100 187 228 +
Chr1	stalkie_big_nohaplotig	CDS	18134009	18134050	.	+	0	Parent=ORF100.mrna2;Target=ORF100 229 270 +
Chr1	stalkie_big_nohaplotig	CDS	18134907	18134969	.	+	0	Parent=ORF100.mrna2;Target=ORF100 271 333 +
Chr1	stalkie_big_nohaplotig	CDS	18144601	18144663	.	+	0	Parent=ORF100.mrna2;Target=ORF100 334 396 +
Chr1	stalkie_big_nohaplotig	CDS	18144746	18144829	.	+	0	Parent=ORF100.mrna2;Target=ORF100 397 480 +
Chr1	stalkie_big_nohaplotig	CDS	18144913	18144951	.	+	0	Parent=ORF100.mrna2;Target=ORF100 481 519 +
Chr1	stalkie_big_nohaplotig	CDS	18146286	18146342	.	+	0	Parent=ORF100.mrna2;Target=ORF100 520 576 +
Chr1	stalkie_big_nohaplotig	CDS	18146617	18146646	.	+	0	Parent=ORF100.mrna2;Target=ORF100 577 606 +
Chr1	stalkie_big_nohaplotig	CDS	18146707	18146736	.	+	0	Parent=ORF100.mrna2;Target=ORF100 607 636 +
Chr1	stalkie_big_nohaplotig	CDS	18146794	18146844	.	+	0	Parent=ORF100.mrna2;Target=ORF100 637 687 +
Chr1	stalkie_big_nohaplotig	CDS	18148569	18148586	.	+	0	Parent=ORF100.mrna2;Target=ORF100 688 705 +
Chr1	stalkie_big_nohaplotig	CDS	18148649	18148663	.	+	0	Parent=ORF100.mrna2;Target=ORF100 706 720 +
Chr1	stalkie_big_nohaplotig	CDS	18148736	18148756	.	+	0	Parent=ORF100.mrna2;Target=ORF100 721 741 +
Chr1	stalkie_big_nohaplotig	CDS	18148812	18148838	.	+	0	Parent=ORF100.mrna2;Target=ORF100 742 768 +
Chr1	stalkie_big_nohaplotig	CDS	18149620	18149652	.	+	0	Parent=ORF100.mrna2;Target=ORF100 769 801 +
Chr1	stalkie_big_nohaplotig	CDS	18150103	18150126	.	+	0	Parent=ORF100.mrna2;Target=ORF100 802 825 +
Chr1	stalkie_big_nohaplotig	CDS	18150185	18150208	.	+	0	Parent=ORF100.mrna2;Target=ORF100 826 849 +
Chr1	stalkie_big_nohaplotig	CDS	18150265	18150288	.	+	0	Parent=ORF100.mrna2;Target=ORF100 850 873 +
Chr1	stalkie_big_nohaplotig	CDS	18150348	18150371	.	+	0	Parent=ORF100.mrna2;Target=ORF100 874 897 +
Chr1	stalkie_big_nohaplotig	CDS	18150427	18150453	.	+	0	Parent=ORF100.mrna2;Target=ORF100 898 924 +
Chr1	stalkie_big_nohaplotig	CDS	18151953	18151994	.	+	0	Parent=ORF100.mrna2;Target=ORF100 925 966 +
Chr1	stalkie_big_nohaplotig	CDS	18152745	18152783	.	+	0	Parent=ORF100.mrna2;Target=ORF100 967 1005 +
Chr1	stalkie_big_nohaplotig	CDS	18153093	18153125	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1006 1038 +
Chr1	stalkie_big_nohaplotig	CDS	18153740	18153781	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1039 1080 +
Chr1	stalkie_big_nohaplotig	CDS	18154222	18154260	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1081 1119 +
Chr1	stalkie_big_nohaplotig	CDS	18154710	18154742	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1120 1152 +
Chr1	stalkie_big_nohaplotig	CDS	18155691	18155717	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1153 1179 +
Chr1	stalkie_big_nohaplotig	CDS	18156626	18156658	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1180 1212 +
Chr1	stalkie_big_nohaplotig	CDS	18157293	18157331	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1213 1251 +
Chr1	stalkie_big_nohaplotig	CDS	18159229	18159282	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1252 1305 +
Chr1	stalkie_big_nohaplotig	CDS	18159639	18159677	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1306 1344 +
Chr1	stalkie_big_nohaplotig	CDS	18161373	18161417	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1345 1389 +
Chr1	stalkie_big_nohaplotig	CDS	18161984	18162028	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1390 1434 +
Chr1	stalkie_big_nohaplotig	CDS	18162726	18162782	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1435 1491 +
Chr1	stalkie_big_nohaplotig	CDS	18164401	18164430	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1492 1521 +
Chr1	stalkie_big_nohaplotig	CDS	18164521	18164574	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1522 1575 +
Chr1	stalkie_big_nohaplotig	CDS	18164638	18164712	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1576 1650 +
Chr1	stalkie_big_nohaplotig	CDS	18164795	18164836	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1651 1692 +
Chr1	stalkie_big_nohaplotig	CDS	18164898	18164927	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1693 1722 +
Chr1	stalkie_big_nohaplotig	CDS	18166541	18166609	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1723 1791 +
Chr1	stalkie_big_nohaplotig	CDS	18166911	18166934	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1792 1815 +
Chr1	stalkie_big_nohaplotig	CDS	18167008	18167037	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1816 1845 +
Chr1	stalkie_big_nohaplotig	CDS	18167096	18167146	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1846 1896 +
Chr1	stalkie_big_nohaplotig	CDS	18167302	18167319	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1897 1914 +
Chr1	stalkie_big_nohaplotig	CDS	18167392	18167418	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1915 1941 +
Chr1	stalkie_big_nohaplotig	CDS	18169718	18169771	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1942 1995 +
Chr1	stalkie_big_nohaplotig	CDS	18169883	18169915	.	+	0	Parent=ORF100.mrna2;Target=ORF100 1996 2028 +
Chr1	stalkie_big_nohaplotig	CDS	18170031	18170096	.	+	0	Parent=ORF100.mrna2;Target=ORF100 2029 2094 +
Chr1	stalkie_big_nohaplotig	CDS	18170225	18170260	.	+	0	Parent=ORF100.mrna2;Target=ORF100 2095 2130 +
Chr1	stalkie_big_nohaplotig	CDS	18170419	18170469	.	+	0	Parent=ORF100.mrna2;Target=ORF100 2131 2181 +
Chr1	stalkie_big_nohaplotig	CDS	18170576	18170632	.	+	0	Parent=ORF100.mrna2;Target=ORF100 2182 2238 +
Chr1	stalkie_big_nohaplotig	CDS	18170692	18170745	.	+	0	Parent=ORF100.mrna2;Target=ORF100 2239 2292 +
Chr1	stalkie_big_nohaplotig	CDS	18170869	18170979	.	+	0	Parent=ORF100.mrna2;Target=ORF100 2293 2403 +
Chr1	stalkie_big_nohaplotig	CDS	18171103	18171126	.	+	0	Parent=ORF100.mrna2;Target=ORF100 2404 2427 +
Chr1	stalkie_big_nohaplotig	CDS	18172195	18172299	.	+	0	Parent=ORF100.mrna2;Target=ORF100 2428 2532 +
Chr1	stalkie_big_nohaplotig	CDS	18174277	18174297	.	+	0	Parent=ORF100.mrna2;Target=ORF100 2533 2553 +
Chr1	stalkie_big_nohaplotig	CDS	18175346	18175408	.	+	0	Parent=ORF100.mrna2;Target=ORF100 2554 2616 +
Chr1	stalkie_big_nohaplotig	CDS	18175470	18175499	.	+	0	Parent=ORF100.mrna2;Target=ORF100 2617 2646 +
Chr1	stalkie_big_nohaplotig	CDS	18175744	18175830	.	+	0	Parent=ORF100.mrna2;Target=ORF100 2647 2733 +
Chr1	stalkie_big_nohaplotig	CDS	18177238	18177255	.	+	0	Parent=ORF100.mrna2;Target=ORF100 2734 2751 +
Chr1	stalkie_big_nohaplotig	CDS	18178413	18178478	.	+	0	Parent=ORF100.mrna2;Target=ORF100 2752 2817 +
Chr1	stalkie_big_nohaplotig	CDS	18178540	18178569	.	+	0	Parent=ORF100.mrna2;Target=ORF100 2818 2847 +
Chr1	stalkie_big_nohaplotig	CDS	18179334	18179420	.	+	0	Parent=ORF100.mrna2;Target=ORF100 2848 2934 +
Chr1	stalkie_big_nohaplotig	CDS	18180295	18180315	.	+	0	Parent=ORF100.mrna2;Target=ORF100 2935 2955 +
Chr1	stalkie_big_nohaplotig	CDS	18180766	18180828	.	+	0	Parent=ORF100.mrna2;Target=ORF100 2956 3018 +
Chr1	stalkie_big_nohaplotig	CDS	18181167	18181196	.	+	0	Parent=ORF100.mrna2;Target=ORF100 3019 3048 +
Chr1	stalkie_big_nohaplotig	mRNA	18119293	18182573	.	+	.	ID=comp159217_c0_seq1.mrna1;geneID=comp159217_c0_seq1.path1;Name=comp159217_c0_seq1;Dir=antisensecoverage=97.3;identity=99.5;matches=3450;mismatches=19;indels=0;unknowns=0;locus=RLOC_00006233
Chr1	stalkie_big_nohaplotig	exon	18119293	18119352	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 3428 3487 -
Chr1	stalkie_big_nohaplotig	exon	18119421	18119468	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 3380 3427 -
Chr1	stalkie_big_nohaplotig	exon	18133895	18133936	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 3338 3379 -
Chr1	stalkie_big_nohaplotig	exon	18134009	18134050	97	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 3296 3337 -
Chr1	stalkie_big_nohaplotig	exon	18134907	18134969	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 3233 3295 -
Chr1	stalkie_big_nohaplotig	exon	18135191	18135253	98	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 3170 3232 -
Chr1	stalkie_big_nohaplotig	exon	18135336	18135419	98	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 3086 3169 -
Chr1	stalkie_big_nohaplotig	exon	18135503	18135541	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 3047 3085 -
Chr1	stalkie_big_nohaplotig	exon	18136876	18136932	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2990 3046 -
Chr1	stalkie_big_nohaplotig	exon	18137207	18137236	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2960 2989 -
Chr1	stalkie_big_nohaplotig	exon	18137297	18137326	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2930 2959 -
Chr1	stalkie_big_nohaplotig	exon	18137383	18137433	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2879 2929 -
Chr1	stalkie_big_nohaplotig	exon	18138567	18138584	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2861 2878 -
Chr1	stalkie_big_nohaplotig	exon	18138647	18138661	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2846 2860 -
Chr1	stalkie_big_nohaplotig	exon	18138734	18138754	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2825 2845 -
Chr1	stalkie_big_nohaplotig	exon	18138810	18138836	96	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2798 2824 -
Chr1	stalkie_big_nohaplotig	exon	18139618	18139650	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2765 2797 -
Chr1	stalkie_big_nohaplotig	exon	18140099	18140122	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2741 2764 -
Chr1	stalkie_big_nohaplotig	exon	18140181	18140204	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2717 2740 -
Chr1	stalkie_big_nohaplotig	exon	18140261	18140284	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2693 2716 -
Chr1	stalkie_big_nohaplotig	exon	18140344	18140367	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2669 2692 -
Chr1	stalkie_big_nohaplotig	exon	18140424	18140450	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2642 2668 -
Chr1	stalkie_big_nohaplotig	exon	18141952	18141993	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2600 2641 -
Chr1	stalkie_big_nohaplotig	exon	18152745	18152783	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2561 2599 -
Chr1	stalkie_big_nohaplotig	exon	18153093	18153125	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2528 2560 -
Chr1	stalkie_big_nohaplotig	exon	18153740	18153781	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2486 2527 -
Chr1	stalkie_big_nohaplotig	exon	18154222	18154260	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2447 2485 -
Chr1	stalkie_big_nohaplotig	exon	18154710	18154742	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2414 2446 -
Chr1	stalkie_big_nohaplotig	exon	18155691	18155717	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2387 2413 -
Chr1	stalkie_big_nohaplotig	exon	18156626	18156658	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2354 2386 -
Chr1	stalkie_big_nohaplotig	exon	18157293	18157331	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2315 2353 -
Chr1	stalkie_big_nohaplotig	exon	18159229	18159282	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2261 2314 -
Chr1	stalkie_big_nohaplotig	exon	18159639	18159677	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2222 2260 -
Chr1	stalkie_big_nohaplotig	exon	18161373	18161417	97	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2177 2221 -
Chr1	stalkie_big_nohaplotig	exon	18161984	18162028	97	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2132 2176 -
Chr1	stalkie_big_nohaplotig	exon	18162726	18162782	96	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2075 2131 -
Chr1	stalkie_big_nohaplotig	exon	18164401	18164430	96	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2045 2074 -
Chr1	stalkie_big_nohaplotig	exon	18164521	18164574	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1991 2044 -
Chr1	stalkie_big_nohaplotig	exon	18164638	18164712	98	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1916 1990 -
Chr1	stalkie_big_nohaplotig	exon	18164795	18164836	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1874 1915 -
Chr1	stalkie_big_nohaplotig	exon	18164898	18164927	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1844 1873 -
Chr1	stalkie_big_nohaplotig	exon	18166541	18166609	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1775 1843 -
Chr1	stalkie_big_nohaplotig	exon	18166911	18166934	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1751 1774 -
Chr1	stalkie_big_nohaplotig	exon	18167008	18167037	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1721 1750 -
Chr1	stalkie_big_nohaplotig	exon	18167096	18167146	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1670 1720 -
Chr1	stalkie_big_nohaplotig	exon	18167302	18167319	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1652 1669 -
Chr1	stalkie_big_nohaplotig	exon	18167392	18167418	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1625 1651 -
Chr1	stalkie_big_nohaplotig	exon	18169718	18169771	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1571 1624 -
Chr1	stalkie_big_nohaplotig	exon	18169883	18169915	93	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1538 1570 -
Chr1	stalkie_big_nohaplotig	exon	18170031	18170096	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1472 1537 -
Chr1	stalkie_big_nohaplotig	exon	18170225	18170260	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1436 1471 -
Chr1	stalkie_big_nohaplotig	exon	18170419	18170469	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1385 1435 -
Chr1	stalkie_big_nohaplotig	exon	18170576	18170632	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1328 1384 -
Chr1	stalkie_big_nohaplotig	exon	18170692	18170745	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1274 1327 -
Chr1	stalkie_big_nohaplotig	exon	18170869	18170979	99	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1163 1273 -
Chr1	stalkie_big_nohaplotig	exon	18171103	18171126	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1139 1162 -
Chr1	stalkie_big_nohaplotig	exon	18172195	18172299	98	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1034 1138 -
Chr1	stalkie_big_nohaplotig	exon	18174277	18174297	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1013 1033 -
Chr1	stalkie_big_nohaplotig	exon	18175346	18175408	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 950 1012 -
Chr1	stalkie_big_nohaplotig	exon	18175470	18175499	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 920 949 -
Chr1	stalkie_big_nohaplotig	exon	18175744	18175830	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 833 919 -
Chr1	stalkie_big_nohaplotig	exon	18177238	18177255	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 815 832 -
Chr1	stalkie_big_nohaplotig	exon	18178413	18178478	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 749 814 -
Chr1	stalkie_big_nohaplotig	exon	18178540	18178569	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 719 748 -
Chr1	stalkie_big_nohaplotig	exon	18179334	18179420	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 632 718 -
Chr1	stalkie_big_nohaplotig	exon	18180295	18180315	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 611 631 -
Chr1	stalkie_big_nohaplotig	exon	18180766	18180828	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 548 610 -
Chr1	stalkie_big_nohaplotig	exon	18181167	18181196	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 518 547 -
Chr1	stalkie_big_nohaplotig	exon	18181250	18181425	97	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 342 517 -
Chr1	stalkie_big_nohaplotig	exon	18181496	18181627	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 210 341 -
Chr1	stalkie_big_nohaplotig	exon	18182383	18182573	100	+	.	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 19 209 -
Chr1	stalkie_big_nohaplotig	CDS	18119293	18119352	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 3428 3487 .
Chr1	stalkie_big_nohaplotig	CDS	18119421	18119468	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 3380 3427 .
Chr1	stalkie_big_nohaplotig	CDS	18133895	18133936	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 3338 3379 .
Chr1	stalkie_big_nohaplotig	CDS	18134009	18134050	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 3296 3337 .
Chr1	stalkie_big_nohaplotig	CDS	18134907	18134969	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 3233 3295 .
Chr1	stalkie_big_nohaplotig	CDS	18135191	18135253	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 3170 3232 .
Chr1	stalkie_big_nohaplotig	CDS	18135336	18135419	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 3086 3169 .
Chr1	stalkie_big_nohaplotig	CDS	18135503	18135541	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 3047 3085 .
Chr1	stalkie_big_nohaplotig	CDS	18136876	18136932	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2990 3046 .
Chr1	stalkie_big_nohaplotig	CDS	18137207	18137236	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2960 2989 .
Chr1	stalkie_big_nohaplotig	CDS	18137297	18137326	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2930 2959 .
Chr1	stalkie_big_nohaplotig	CDS	18137383	18137433	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2879 2929 .
Chr1	stalkie_big_nohaplotig	CDS	18138567	18138584	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2861 2878 .
Chr1	stalkie_big_nohaplotig	CDS	18138647	18138661	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2846 2860 .
Chr1	stalkie_big_nohaplotig	CDS	18138734	18138754	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2825 2845 .
Chr1	stalkie_big_nohaplotig	CDS	18138810	18138836	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2798 2824 .
Chr1	stalkie_big_nohaplotig	CDS	18139618	18139650	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2765 2797 .
Chr1	stalkie_big_nohaplotig	CDS	18140099	18140122	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2741 2764 .
Chr1	stalkie_big_nohaplotig	CDS	18140181	18140204	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2717 2740 .
Chr1	stalkie_big_nohaplotig	CDS	18140261	18140284	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2693 2716 .
Chr1	stalkie_big_nohaplotig	CDS	18140344	18140367	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2669 2692 .
Chr1	stalkie_big_nohaplotig	CDS	18140424	18140450	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2642 2668 .
Chr1	stalkie_big_nohaplotig	CDS	18141952	18141993	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2600 2641 .
Chr1	stalkie_big_nohaplotig	CDS	18152745	18152783	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2561 2599 .
Chr1	stalkie_big_nohaplotig	CDS	18153093	18153125	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2528 2560 .
Chr1	stalkie_big_nohaplotig	CDS	18153740	18153781	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2486 2527 .
Chr1	stalkie_big_nohaplotig	CDS	18154222	18154260	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2447 2485 .
Chr1	stalkie_big_nohaplotig	CDS	18154710	18154742	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2414 2446 .
Chr1	stalkie_big_nohaplotig	CDS	18155691	18155717	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2387 2413 .
Chr1	stalkie_big_nohaplotig	CDS	18156626	18156658	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2354 2386 .
Chr1	stalkie_big_nohaplotig	CDS	18157293	18157331	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2315 2353 .
Chr1	stalkie_big_nohaplotig	CDS	18159229	18159282	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2261 2314 .
Chr1	stalkie_big_nohaplotig	CDS	18159639	18159677	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2222 2260 .
Chr1	stalkie_big_nohaplotig	CDS	18161373	18161417	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2177 2221 .
Chr1	stalkie_big_nohaplotig	CDS	18161984	18162028	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2132 2176 .
Chr1	stalkie_big_nohaplotig	CDS	18162726	18162782	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2075 2131 .
Chr1	stalkie_big_nohaplotig	CDS	18164401	18164430	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 2045 2074 .
Chr1	stalkie_big_nohaplotig	CDS	18164521	18164574	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1991 2044 .
Chr1	stalkie_big_nohaplotig	CDS	18164638	18164712	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1916 1990 .
Chr1	stalkie_big_nohaplotig	CDS	18164795	18164836	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1874 1915 .
Chr1	stalkie_big_nohaplotig	CDS	18164898	18164927	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1844 1873 .
Chr1	stalkie_big_nohaplotig	CDS	18166541	18166609	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1775 1843 .
Chr1	stalkie_big_nohaplotig	CDS	18166911	18166934	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1751 1774 .
Chr1	stalkie_big_nohaplotig	CDS	18167008	18167037	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1721 1750 .
Chr1	stalkie_big_nohaplotig	CDS	18167096	18167146	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1670 1720 .
Chr1	stalkie_big_nohaplotig	CDS	18167302	18167319	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1652 1669 .
Chr1	stalkie_big_nohaplotig	CDS	18167392	18167418	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1625 1651 .
Chr1	stalkie_big_nohaplotig	CDS	18169718	18169771	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1571 1624 .
Chr1	stalkie_big_nohaplotig	CDS	18169883	18169915	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1538 1570 .
Chr1	stalkie_big_nohaplotig	CDS	18170031	18170096	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1472 1537 .
Chr1	stalkie_big_nohaplotig	CDS	18170225	18170260	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1436 1471 .
Chr1	stalkie_big_nohaplotig	CDS	18170419	18170469	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1385 1435 .
Chr1	stalkie_big_nohaplotig	CDS	18170576	18170632	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1328 1384 .
Chr1	stalkie_big_nohaplotig	CDS	18170692	18170745	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1274 1327 .
Chr1	stalkie_big_nohaplotig	CDS	18170869	18170979	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1163 1273 .
Chr1	stalkie_big_nohaplotig	CDS	18171103	18171126	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1139 1162 .
Chr1	stalkie_big_nohaplotig	CDS	18172195	18172299	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1034 1138 .
Chr1	stalkie_big_nohaplotig	CDS	18174277	18174297	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 1013 1033 .
Chr1	stalkie_big_nohaplotig	CDS	18175346	18175408	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 950 1012 .
Chr1	stalkie_big_nohaplotig	CDS	18175470	18175499	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 920 949 .
Chr1	stalkie_big_nohaplotig	CDS	18175744	18175830	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 833 919 .
Chr1	stalkie_big_nohaplotig	CDS	18177238	18177255	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 815 832 .
Chr1	stalkie_big_nohaplotig	CDS	18178413	18178478	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 749 814 .
Chr1	stalkie_big_nohaplotig	CDS	18178540	18178569	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 719 748 .
Chr1	stalkie_big_nohaplotig	CDS	18179334	18179420	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 632 718 .
Chr1	stalkie_big_nohaplotig	CDS	18180295	18180315	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 611 631 .
Chr1	stalkie_big_nohaplotig	CDS	18180766	18180828	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 548 610 .
Chr1	stalkie_big_nohaplotig	CDS	18181167	18181196	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 518 547 .
Chr1	stalkie_big_nohaplotig	CDS	18181250	18181261	.	+	0	Parent=comp159217_c0_seq1.mrna1;Target=comp159217_c0_seq1 506 517 .
Chr1	stalkie_big_nohaplotig	mRNA	18150430	18151945	.	+	.	ID=comp150368_c0_seq1.mrna1;geneID=comp150368_c0_seq1.path1;Name=comp150368_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1500;mismatches=16;indels=1;unknowns=0;Target=comp150368_c0_seq1 1517 1 .;CDS_Target=comp150368_c0_seq1 454 245 .;locus=RLOC_00006233
Chr1	stalkie_big_nohaplotig	exon	18150430	18151945	98	+	.	Parent=comp150368_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	18150674	18150883	.	+	0	Parent=comp150368_c0_seq1.mrna1
Chr1	gffcl	locus	18126764	18133504	.	+	.	ID=RLOC_00006234;geneIDs=ORF100.path1,comp159217_c0_seq1.path2;transcripts=ORF100.mrna1,comp159217_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	18126764	18133504	.	+	.	ID=ORF100.mrna1;geneID=ORF100.path1;Name=ORF100;Dir=sensecoverage=2.6;identity=98.7;matches=77;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006234
Chr1	stalkie_big_nohaplotig	exon	18126764	18126787	100	+	.	Parent=ORF100.mrna1;Target=ORF100 1 24 +
Chr1	stalkie_big_nohaplotig	exon	18127222	18127251	100	+	.	Parent=ORF100.mrna1;Target=ORF100 25 54 +
Chr1	stalkie_big_nohaplotig	exon	18133481	18133504	95	+	.	Parent=ORF100.mrna1;Target=ORF100 55 78 +
Chr1	stalkie_big_nohaplotig	CDS	18126764	18126787	.	+	0	Parent=ORF100.mrna1;Target=ORF100 1 24 +
Chr1	stalkie_big_nohaplotig	CDS	18127222	18127251	.	+	0	Parent=ORF100.mrna1;Target=ORF100 25 54 +
Chr1	stalkie_big_nohaplotig	CDS	18133481	18133504	.	+	0	Parent=ORF100.mrna1;Target=ORF100 55 78 +
Chr1	stalkie_big_nohaplotig	mRNA	18129208	18133504	.	+	.	ID=comp159217_c0_seq1.mrna2;geneID=comp159217_c0_seq1.path2;Name=comp159217_c0_seq1;Dir=antisensecoverage=2.2;identity=98.8;matches=79;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006234
Chr1	stalkie_big_nohaplotig	exon	18129208	18129233	100	+	.	Parent=comp159217_c0_seq1.mrna2;Target=comp159217_c0_seq1 3542 3567 -
Chr1	stalkie_big_nohaplotig	exon	18132117	18132146	100	+	.	Parent=comp159217_c0_seq1.mrna2;Target=comp159217_c0_seq1 3512 3541 -
Chr1	stalkie_big_nohaplotig	exon	18133481	18133504	95	+	.	Parent=comp159217_c0_seq1.mrna2;Target=comp159217_c0_seq1 3488 3511 -
Chr1	gffcl	locus	18205808	18206062	.	-	.	ID=RLOC_00006235;geneIDs=comp87355_c0_seq1.path1;transcripts=comp87355_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18205808	18206062	.	-	.	ID=comp87355_c0_seq1.mrna1;geneID=comp87355_c0_seq1.path1;Name=comp87355_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.2;matches=253;mismatches=2;indels=0;unknowns=0;Target=comp87355_c0_seq1 257 3 .;CDS_Target=comp87355_c0_seq1 97 5 .;locus=RLOC_00006235
Chr1	stalkie_big_nohaplotig	exon	18205808	18206062	99	-	.	Parent=comp87355_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	18205968	18206060	.	-	0	Parent=comp87355_c0_seq1.mrna1
Chr1	gffcl	locus	18207930	18208850	.	+	.	ID=RLOC_00006236;geneIDs=FBgn0036740.1.path1;transcripts=FBgn0036740.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18207930	18208850	.	+	.	ID=FBgn0036740.1.mrna1;geneID=FBgn0036740.1.path1;Name=FBgn0036740.1;Dir=sensecoverage=100.0;identity=99.6;matches=672;mismatches=2;indels=1;unknowns=0;locus=RLOC_00006236
Chr1	stalkie_big_nohaplotig	exon	18207930	18207994	98	+	.	Parent=FBgn0036740.1.mrna1;Target=FBgn0036740.1 1 65 +
Chr1	stalkie_big_nohaplotig	exon	18208052	18208203	99	+	.	Parent=FBgn0036740.1.mrna1;Target=FBgn0036740.1 66 218 +
Chr1	stalkie_big_nohaplotig	exon	18208262	18208427	100	+	.	Parent=FBgn0036740.1.mrna1;Target=FBgn0036740.1 219 384 +
Chr1	stalkie_big_nohaplotig	exon	18208500	18208730	99	+	.	Parent=FBgn0036740.1.mrna1;Target=FBgn0036740.1 385 615 +
Chr1	stalkie_big_nohaplotig	exon	18208791	18208850	100	+	.	Parent=FBgn0036740.1.mrna1;Target=FBgn0036740.1 616 675 +
Chr1	stalkie_big_nohaplotig	CDS	18207932	18207994	.	+	0	Parent=FBgn0036740.1.mrna1;Target=FBgn0036740.1 3 65 +
Chr1	stalkie_big_nohaplotig	CDS	18208052	18208203	.	+	0	Parent=FBgn0036740.1.mrna1;Target=FBgn0036740.1 66 218 +
Chr1	stalkie_big_nohaplotig	CDS	18208262	18208267	.	+	1	Parent=FBgn0036740.1.mrna1;Target=FBgn0036740.1 219 224 +
Chr1	gffcl	locus	18215292	18217188	.	-	.	ID=RLOC_00006237;geneIDs=FBgn0053145.1.path1;transcripts=FBgn0053145.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18215292	18217188	.	-	.	ID=FBgn0053145.1.mrna1;geneID=FBgn0053145.1.path1;Name=FBgn0053145.1;Dir=sensecoverage=100.0;identity=99.2;matches=1437;mismatches=12;indels=0;unknowns=0;locus=RLOC_00006237
Chr1	stalkie_big_nohaplotig	exon	18215292	18216113	98	-	.	Parent=FBgn0053145.1.mrna1;Target=FBgn0053145.1 628 1449 +
Chr1	stalkie_big_nohaplotig	exon	18216174	18216321	99	-	.	Parent=FBgn0053145.1.mrna1;Target=FBgn0053145.1 480 627 +
Chr1	stalkie_big_nohaplotig	exon	18216649	18216805	100	-	.	Parent=FBgn0053145.1.mrna1;Target=FBgn0053145.1 323 479 +
Chr1	stalkie_big_nohaplotig	exon	18216867	18217188	99	-	.	Parent=FBgn0053145.1.mrna1;Target=FBgn0053145.1 1 322 +
Chr1	stalkie_big_nohaplotig	CDS	18215292	18216113	.	-	0	Parent=FBgn0053145.1.mrna1;Target=FBgn0053145.1 628 1449 +
Chr1	stalkie_big_nohaplotig	CDS	18216174	18216321	.	-	1	Parent=FBgn0053145.1.mrna1;Target=FBgn0053145.1 480 627 +
Chr1	stalkie_big_nohaplotig	CDS	18216649	18216805	.	-	2	Parent=FBgn0053145.1.mrna1;Target=FBgn0053145.1 323 479 +
Chr1	stalkie_big_nohaplotig	CDS	18216867	18217188	.	-	0	Parent=FBgn0053145.1.mrna1;Target=FBgn0053145.1 1 322 +
Chr1	gffcl	locus	18219320	18220967	.	+	.	ID=RLOC_00006238;geneIDs=FBgn0263697.1.path1;transcripts=FBgn0263697.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18219320	18220967	.	+	.	ID=FBgn0263697.1.mrna1;geneID=FBgn0263697.1.path1;Name=FBgn0263697.1;Dir=sensecoverage=100.0;identity=99.5;matches=1403;mismatches=7;indels=0;unknowns=0;locus=RLOC_00006238
Chr1	stalkie_big_nohaplotig	exon	18219320	18219545	99	+	.	Parent=FBgn0263697.1.mrna1;Target=FBgn0263697.1 1 226 +
Chr1	stalkie_big_nohaplotig	exon	18219613	18220282	99	+	.	Parent=FBgn0263697.1.mrna1;Target=FBgn0263697.1 227 896 +
Chr1	stalkie_big_nohaplotig	exon	18220336	18220417	100	+	.	Parent=FBgn0263697.1.mrna1;Target=FBgn0263697.1 897 978 +
Chr1	stalkie_big_nohaplotig	exon	18220480	18220705	100	+	.	Parent=FBgn0263697.1.mrna1;Target=FBgn0263697.1 979 1204 +
Chr1	stalkie_big_nohaplotig	exon	18220762	18220967	99	+	.	Parent=FBgn0263697.1.mrna1;Target=FBgn0263697.1 1205 1410 +
Chr1	stalkie_big_nohaplotig	CDS	18219320	18219545	.	+	0	Parent=FBgn0263697.1.mrna1;Target=FBgn0263697.1 1 226 +
Chr1	stalkie_big_nohaplotig	CDS	18219613	18220282	.	+	2	Parent=FBgn0263697.1.mrna1;Target=FBgn0263697.1 227 896 +
Chr1	stalkie_big_nohaplotig	CDS	18220336	18220417	.	+	1	Parent=FBgn0263697.1.mrna1;Target=FBgn0263697.1 897 978 +
Chr1	stalkie_big_nohaplotig	CDS	18220480	18220705	.	+	0	Parent=FBgn0263697.1.mrna1;Target=FBgn0263697.1 979 1204 +
Chr1	stalkie_big_nohaplotig	CDS	18220762	18220967	.	+	2	Parent=FBgn0263697.1.mrna1;Target=FBgn0263697.1 1205 1410 +
Chr1	gffcl	locus	18221259	18232959	.	-	.	ID=RLOC_00006239;geneIDs=FBgn0035168.1.path1;transcripts=FBgn0035168.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18221259	18232959	.	-	.	ID=FBgn0035168.1.mrna1;geneID=FBgn0035168.1.path1;Name=FBgn0035168.1;Dir=sensecoverage=100.0;identity=99.2;matches=6319;mismatches=50;indels=0;unknowns=0;locus=RLOC_00006239
Chr1	stalkie_big_nohaplotig	exon	18221259	18221453	99	-	.	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 6175 6369 +
Chr1	stalkie_big_nohaplotig	exon	18221520	18221657	99	-	.	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 6037 6174 +
Chr1	stalkie_big_nohaplotig	exon	18221722	18221917	100	-	.	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 5841 6036 +
Chr1	stalkie_big_nohaplotig	exon	18223072	18223549	98	-	.	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 5363 5840 +
Chr1	stalkie_big_nohaplotig	exon	18223654	18224197	99	-	.	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 4819 5362 +
Chr1	stalkie_big_nohaplotig	exon	18224255	18224387	100	-	.	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 4686 4818 +
Chr1	stalkie_big_nohaplotig	exon	18224445	18224995	99	-	.	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 4135 4685 +
Chr1	stalkie_big_nohaplotig	exon	18225058	18225220	96	-	.	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 3972 4134 +
Chr1	stalkie_big_nohaplotig	exon	18225288	18225937	98	-	.	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 3322 3971 +
Chr1	stalkie_big_nohaplotig	exon	18226177	18226396	99	-	.	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 3102 3321 +
Chr1	stalkie_big_nohaplotig	exon	18227720	18227873	100	-	.	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 2948 3101 +
Chr1	stalkie_big_nohaplotig	exon	18227931	18228063	100	-	.	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 2815 2947 +
Chr1	stalkie_big_nohaplotig	exon	18228132	18229105	98	-	.	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 1841 2814 +
Chr1	stalkie_big_nohaplotig	exon	18229166	18229289	100	-	.	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 1717 1840 +
Chr1	stalkie_big_nohaplotig	exon	18229361	18229532	99	-	.	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 1545 1716 +
Chr1	stalkie_big_nohaplotig	exon	18229770	18230356	99	-	.	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 958 1544 +
Chr1	stalkie_big_nohaplotig	exon	18231729	18232151	99	-	.	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 535 957 +
Chr1	stalkie_big_nohaplotig	exon	18232299	18232472	99	-	.	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 361 534 +
Chr1	stalkie_big_nohaplotig	exon	18232530	18232618	98	-	.	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 272 360 +
Chr1	stalkie_big_nohaplotig	exon	18232689	18232959	99	-	.	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 1 271 +
Chr1	stalkie_big_nohaplotig	CDS	18221259	18221453	.	-	0	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 6175 6369 +
Chr1	stalkie_big_nohaplotig	CDS	18221520	18221657	.	-	0	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 6037 6174 +
Chr1	stalkie_big_nohaplotig	CDS	18221722	18221917	.	-	1	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 5841 6036 +
Chr1	stalkie_big_nohaplotig	CDS	18223072	18223549	.	-	2	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 5363 5840 +
Chr1	stalkie_big_nohaplotig	CDS	18223654	18224197	.	-	0	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 4819 5362 +
Chr1	stalkie_big_nohaplotig	CDS	18224255	18224387	.	-	1	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 4686 4818 +
Chr1	stalkie_big_nohaplotig	CDS	18224445	18224995	.	-	0	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 4135 4685 +
Chr1	stalkie_big_nohaplotig	CDS	18225058	18225220	.	-	1	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 3972 4134 +
Chr1	stalkie_big_nohaplotig	CDS	18225288	18225937	.	-	0	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 3322 3971 +
Chr1	stalkie_big_nohaplotig	CDS	18226177	18226396	.	-	1	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 3102 3321 +
Chr1	stalkie_big_nohaplotig	CDS	18227720	18227873	.	-	2	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 2948 3101 +
Chr1	stalkie_big_nohaplotig	CDS	18227931	18228063	.	-	0	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 2815 2947 +
Chr1	stalkie_big_nohaplotig	CDS	18228132	18229105	.	-	2	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 1841 2814 +
Chr1	stalkie_big_nohaplotig	CDS	18229166	18229289	.	-	0	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 1717 1840 +
Chr1	stalkie_big_nohaplotig	CDS	18229361	18229532	.	-	1	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 1545 1716 +
Chr1	stalkie_big_nohaplotig	CDS	18229770	18230356	.	-	0	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 958 1544 +
Chr1	stalkie_big_nohaplotig	CDS	18231729	18232151	.	-	0	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 535 957 +
Chr1	stalkie_big_nohaplotig	CDS	18232299	18232472	.	-	0	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 361 534 +
Chr1	stalkie_big_nohaplotig	CDS	18232530	18232618	.	-	2	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 272 360 +
Chr1	stalkie_big_nohaplotig	CDS	18232689	18232959	.	-	0	Parent=FBgn0035168.1.mrna1;Target=FBgn0035168.1 1 271 +
Chr1	gffcl	locus	18270047	18271567	.	-	.	ID=RLOC_00006240;geneIDs=FBgn0040321.1.path1;transcripts=FBgn0040321.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18270047	18271567	.	-	.	ID=FBgn0040321.1.mrna1;geneID=FBgn0040321.1.path1;Name=FBgn0040321.1;Dir=indeterminatecoverage=100.0;identity=96.3;matches=1466;mismatches=53;indels=4;unknowns=0;Target=FBgn0040321.1 1521 1 .;locus=RLOC_00006240
Chr1	stalkie_big_nohaplotig	exon	18270047	18271567	96	-	.	Parent=FBgn0040321.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	18270047	18271567	.	-	0	Parent=FBgn0040321.1.mrna1
Chr1	gffcl	locus	18292462	18302183	.	+	.	ID=RLOC_00006242;geneIDs=comp161252_c0_seq1.path1,comp191815_c0_seq1.path1;transcripts=comp161252_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18292462	18301831	.	+	.	ID=comp161252_c0_seq1.mrna1;geneID=comp161252_c0_seq1.path1;Name=comp161252_c0_seq1;Dir=indeterminatecoverage=95.4;identity=96.1;matches=1166;mismatches=15;indels=32;unknowns=0;locus=RLOC_00006242
Chr1	stalkie_big_nohaplotig	exon	18292462	18292466	100	+	.	Parent=comp161252_c0_seq1.mrna1;Target=comp161252_c0_seq1 63 59 .
Chr1	stalkie_big_nohaplotig	exon	18300654	18301831	96	+	.	Parent=comp161252_c0_seq1.mrna1;Target=comp161252_c0_seq1 1269 64 .
Chr1	stalkie_big_nohaplotig	CDS	18292464	18292466	.	+	0	Parent=comp161252_c0_seq1.mrna1;Target=comp161252_c0_seq1 63 61 .
Chr1	stalkie_big_nohaplotig	CDS	18300654	18300787	.	+	0	Parent=comp161252_c0_seq1.mrna1;Target=comp161252_c0_seq1 195 64 .
Chr1	gffcl	locus	18302832	18304264	.	+	.	ID=RLOC_00006243;geneIDs=comp163125_c0_seq1.path1;transcripts=comp163125_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18302832	18304264	.	+	.	ID=comp163125_c0_seq1.mrna1;geneID=comp163125_c0_seq1.path1;Name=comp163125_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.7;matches=1402;mismatches=26;indels=53;unknowns=0;Target=comp163125_c0_seq1 1476 1 .;CDS_Target=comp163125_c0_seq1 574 485 .;locus=RLOC_00006243
Chr1	stalkie_big_nohaplotig	exon	18302832	18304264	94	+	.	Parent=comp163125_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	18303268	18303357	.	+	0	Parent=comp163125_c0_seq1.mrna1
Chr1	gffcl	locus	18304441	18305098	.	-	.	ID=RLOC_00006244;geneIDs=comp147886_c0_seq1.path1;transcripts=comp147886_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18304441	18305098	.	-	.	ID=comp147886_c0_seq1.mrna1;geneID=comp147886_c0_seq1.path1;Name=comp147886_c0_seq1;Dir=indeterminatecoverage=97.6;identity=100.0;matches=658;mismatches=0;indels=0;unknowns=0;Target=comp147886_c0_seq1 663 6 .;CDS_Target=comp147886_c0_seq1 256 173 .;locus=RLOC_00006244
Chr1	stalkie_big_nohaplotig	exon	18304441	18305098	100	-	.	Parent=comp147886_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	18304848	18304931	.	-	0	Parent=comp147886_c0_seq1.mrna1
Chr1	gffcl	locus	18305290	18305513	.	-	.	ID=RLOC_00006245;geneIDs=comp109916_c0_seq1.path1;transcripts=comp109916_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18305290	18305513	.	-	.	ID=comp109916_c0_seq1.mrna1;geneID=comp109916_c0_seq1.path1;Name=comp109916_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=224;mismatches=0;indels=1;unknowns=0;Target=comp109916_c0_seq1 225 1 .;CDS_Target=comp109916_c0_seq1 66 1 .;locus=RLOC_00006245
Chr1	stalkie_big_nohaplotig	exon	18305290	18305513	99	-	.	Parent=comp109916_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	18305448	18305513	.	-	0	Parent=comp109916_c0_seq1.mrna1
Chr1	gffcl	locus	18319024	18323071	.	+	.	ID=RLOC_00006246;geneIDs=FBgn0264305.path1;transcripts=FBgn0264305.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18319024	18323071	.	+	.	ID=FBgn0264305.mrna1;geneID=FBgn0264305.path1;Name=FBgn0264305;Dir=sensecoverage=100.0;identity=99.7;matches=1986;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006246
Chr1	stalkie_big_nohaplotig	exon	18319024	18319051	100	+	.	Parent=FBgn0264305.mrna1;Target=FBgn0264305 1 28 +
Chr1	stalkie_big_nohaplotig	exon	18319143	18319302	100	+	.	Parent=FBgn0264305.mrna1;Target=FBgn0264305 29 188 +
Chr1	stalkie_big_nohaplotig	exon	18319371	18319662	99	+	.	Parent=FBgn0264305.mrna1;Target=FBgn0264305 189 480 +
Chr1	stalkie_big_nohaplotig	exon	18319720	18319829	100	+	.	Parent=FBgn0264305.mrna1;Target=FBgn0264305 481 590 +
Chr1	stalkie_big_nohaplotig	exon	18321172	18321307	99	+	.	Parent=FBgn0264305.mrna1;Target=FBgn0264305 591 726 +
Chr1	stalkie_big_nohaplotig	exon	18321391	18321555	99	+	.	Parent=FBgn0264305.mrna1;Target=FBgn0264305 727 891 +
Chr1	stalkie_big_nohaplotig	exon	18321656	18321718	100	+	.	Parent=FBgn0264305.mrna1;Target=FBgn0264305 892 954 +
Chr1	stalkie_big_nohaplotig	exon	18321791	18321985	100	+	.	Parent=FBgn0264305.mrna1;Target=FBgn0264305 955 1149 +
Chr1	stalkie_big_nohaplotig	exon	18322045	18322508	100	+	.	Parent=FBgn0264305.mrna1;Target=FBgn0264305 1150 1613 +
Chr1	stalkie_big_nohaplotig	exon	18322607	18322792	98	+	.	Parent=FBgn0264305.mrna1;Target=FBgn0264305 1614 1799 +
Chr1	stalkie_big_nohaplotig	exon	18322879	18323071	99	+	.	Parent=FBgn0264305.mrna1;Target=FBgn0264305 1800 1992 +
Chr1	stalkie_big_nohaplotig	CDS	18319024	18319051	.	+	0	Parent=FBgn0264305.mrna1;Target=FBgn0264305 1 28 +
Chr1	stalkie_big_nohaplotig	CDS	18319143	18319302	.	+	2	Parent=FBgn0264305.mrna1;Target=FBgn0264305 29 188 +
Chr1	stalkie_big_nohaplotig	CDS	18319371	18319662	.	+	1	Parent=FBgn0264305.mrna1;Target=FBgn0264305 189 480 +
Chr1	stalkie_big_nohaplotig	CDS	18319720	18319829	.	+	0	Parent=FBgn0264305.mrna1;Target=FBgn0264305 481 590 +
Chr1	stalkie_big_nohaplotig	CDS	18321172	18321307	.	+	1	Parent=FBgn0264305.mrna1;Target=FBgn0264305 591 726 +
Chr1	stalkie_big_nohaplotig	CDS	18321391	18321555	.	+	0	Parent=FBgn0264305.mrna1;Target=FBgn0264305 727 891 +
Chr1	stalkie_big_nohaplotig	CDS	18321656	18321718	.	+	0	Parent=FBgn0264305.mrna1;Target=FBgn0264305 892 954 +
Chr1	stalkie_big_nohaplotig	CDS	18321791	18321985	.	+	0	Parent=FBgn0264305.mrna1;Target=FBgn0264305 955 1149 +
Chr1	stalkie_big_nohaplotig	CDS	18322045	18322508	.	+	0	Parent=FBgn0264305.mrna1;Target=FBgn0264305 1150 1613 +
Chr1	stalkie_big_nohaplotig	CDS	18322607	18322792	.	+	1	Parent=FBgn0264305.mrna1;Target=FBgn0264305 1614 1799 +
Chr1	stalkie_big_nohaplotig	CDS	18322879	18323071	.	+	1	Parent=FBgn0264305.mrna1;Target=FBgn0264305 1800 1992 +
Chr1	gffcl	locus	18324936	18383057	.	-	.	ID=RLOC_00006247;geneIDs=comp153258_c0_seq1.path2;transcripts=comp153258_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	18324936	18383057	.	-	.	ID=comp153258_c0_seq1.mrna2;geneID=comp153258_c0_seq1.path2;Name=comp153258_c0_seq1;Dir=indeterminatecoverage=83.4;identity=99.2;matches=714;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006247
Chr1	stalkie_big_nohaplotig	exon	18324936	18325606	99	-	.	Parent=comp153258_c0_seq1.mrna2;Target=comp153258_c0_seq1 863 193 .
Chr1	stalkie_big_nohaplotig	exon	18329056	18329057	100	-	.	Parent=comp153258_c0_seq1.mrna2;Target=comp153258_c0_seq1 192 191 .
Chr1	stalkie_big_nohaplotig	exon	18337572	18337577	100	-	.	Parent=comp153258_c0_seq1.mrna2;Target=comp153258_c0_seq1 190 185 .
Chr1	stalkie_big_nohaplotig	exon	18352739	18352741	100	-	.	Parent=comp153258_c0_seq1.mrna2;Target=comp153258_c0_seq1 184 182 .
Chr1	stalkie_big_nohaplotig	exon	18360217	18360225	100	-	.	Parent=comp153258_c0_seq1.mrna2;Target=comp153258_c0_seq1 181 173 .
Chr1	stalkie_big_nohaplotig	exon	18364818	18364824	100	-	.	Parent=comp153258_c0_seq1.mrna2;Target=comp153258_c0_seq1 172 166 .
Chr1	stalkie_big_nohaplotig	exon	18367184	18367193	100	-	.	Parent=comp153258_c0_seq1.mrna2;Target=comp153258_c0_seq1 165 156 .
Chr1	stalkie_big_nohaplotig	exon	18374630	18374633	100	-	.	Parent=comp153258_c0_seq1.mrna2;Target=comp153258_c0_seq1 155 152 .
Chr1	stalkie_big_nohaplotig	exon	18375499	18375500	100	-	.	Parent=comp153258_c0_seq1.mrna2;Target=comp153258_c0_seq1 151 150 .
Chr1	stalkie_big_nohaplotig	exon	18382068	18382070	100	-	.	Parent=comp153258_c0_seq1.mrna2;Target=comp153258_c0_seq1 149 147 .
Chr1	stalkie_big_nohaplotig	exon	18383055	18383057	100	-	.	Parent=comp153258_c0_seq1.mrna2;Target=comp153258_c0_seq1 146 144 .
Chr1	gffcl	locus	18325715	18346456	.	-	.	ID=RLOC_00006248;geneIDs=FBgn0035936.1.path1;transcripts=FBgn0035936.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18325715	18346456	.	-	.	ID=FBgn0035936.1.mrna1;geneID=FBgn0035936.1.path1;Name=FBgn0035936.1;Dir=sensecoverage=100.0;identity=99.8;matches=817;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006248
Chr1	stalkie_big_nohaplotig	exon	18325715	18325864	100	-	.	Parent=FBgn0035936.1.mrna1;Target=FBgn0035936.1 670 819 +
Chr1	stalkie_big_nohaplotig	exon	18325940	18326227	100	-	.	Parent=FBgn0035936.1.mrna1;Target=FBgn0035936.1 382 669 +
Chr1	stalkie_big_nohaplotig	exon	18326303	18326377	98	-	.	Parent=FBgn0035936.1.mrna1;Target=FBgn0035936.1 307 381 +
Chr1	stalkie_big_nohaplotig	exon	18341599	18341727	100	-	.	Parent=FBgn0035936.1.mrna1;Target=FBgn0035936.1 178 306 +
Chr1	stalkie_big_nohaplotig	exon	18345613	18345711	98	-	.	Parent=FBgn0035936.1.mrna1;Target=FBgn0035936.1 79 177 +
Chr1	stalkie_big_nohaplotig	exon	18346379	18346456	100	-	.	Parent=FBgn0035936.1.mrna1;Target=FBgn0035936.1 1 78 +
Chr1	stalkie_big_nohaplotig	CDS	18325715	18325864	.	-	0	Parent=FBgn0035936.1.mrna1;Target=FBgn0035936.1 670 819 +
Chr1	stalkie_big_nohaplotig	CDS	18325940	18326227	.	-	0	Parent=FBgn0035936.1.mrna1;Target=FBgn0035936.1 382 669 +
Chr1	stalkie_big_nohaplotig	CDS	18326303	18326377	.	-	0	Parent=FBgn0035936.1.mrna1;Target=FBgn0035936.1 307 381 +
Chr1	stalkie_big_nohaplotig	CDS	18341599	18341727	.	-	0	Parent=FBgn0035936.1.mrna1;Target=FBgn0035936.1 178 306 +
Chr1	stalkie_big_nohaplotig	CDS	18345613	18345711	.	-	0	Parent=FBgn0035936.1.mrna1;Target=FBgn0035936.1 79 177 +
Chr1	stalkie_big_nohaplotig	CDS	18346379	18346456	.	-	0	Parent=FBgn0035936.1.mrna1;Target=FBgn0035936.1 1 78 +
Chr1	gffcl	locus	18333708	18335309	.	-	.	ID=RLOC_00006249;geneIDs=FBgn0039071.1.path1;transcripts=FBgn0039071.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18333708	18335309	.	-	.	ID=FBgn0039071.1.mrna1;geneID=FBgn0039071.1.path1;Name=FBgn0039071.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1602;mismatches=0;indels=0;unknowns=0;Target=FBgn0039071.1 1602 1 .;locus=RLOC_00006249
Chr1	stalkie_big_nohaplotig	exon	18333708	18335309	100	-	.	Parent=FBgn0039071.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	18333708	18335309	.	-	0	Parent=FBgn0039071.1.mrna1
Chr1	gffcl	locus	18335576	18336145	.	+	.	ID=RLOC_00006250;geneIDs=comp570178_c0_seq1.path1;transcripts=comp570178_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18335576	18336145	.	+	.	ID=comp570178_c0_seq1.mrna1;geneID=comp570178_c0_seq1.path1;Name=comp570178_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=570;mismatches=0;indels=0;unknowns=0;Target=comp570178_c0_seq1 570 1 .;CDS_Target=comp570178_c0_seq1 569 393 .;locus=RLOC_00006250
Chr1	stalkie_big_nohaplotig	exon	18335576	18336145	100	+	.	Parent=comp570178_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	18335968	18336144	.	+	0	Parent=comp570178_c0_seq1.mrna1
Chr1	gffcl	locus	18355554	20299738	.	-	.	ID=RLOC_00006251;geneIDs=comp122455_c0_seq1.path1,comp147025_c0_seq1.path1;transcripts=comp147025_c0_seq1.mrna1,comp122455_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18355554	20299738	.	-	.	ID=comp147025_c0_seq1.mrna1;geneID=comp147025_c0_seq1.path1;Name=comp147025_c0_seq1;Dir=indeterminatecoverage=84.5;identity=92.3;matches=543;mismatches=0;indels=45;unknowns=0;Target=comp147025_c0_seq1 297 112 .;locus=RLOC_00006251
Chr1	stalkie_big_nohaplotig	exon	18355554	18355562	100	-	.	Parent=comp147025_c0_seq1.mrna1;Target=comp147025_c0_seq1 585 577 .
Chr1	stalkie_big_nohaplotig	exon	18358993	18358996	100	-	.	Parent=comp147025_c0_seq1.mrna1;Target=comp147025_c0_seq1 576 573 .
Chr1	stalkie_big_nohaplotig	exon	18361484	18361489	100	-	.	Parent=comp147025_c0_seq1.mrna1;Target=comp147025_c0_seq1 572 567 .
Chr1	stalkie_big_nohaplotig	exon	18363079	18363087	100	-	.	Parent=comp147025_c0_seq1.mrna1;Target=comp147025_c0_seq1 566 558 .
Chr1	stalkie_big_nohaplotig	exon	18365045	18365051	100	-	.	Parent=comp147025_c0_seq1.mrna1;Target=comp147025_c0_seq1 557 551 .
Chr1	stalkie_big_nohaplotig	exon	18365061	18365068	100	-	.	Parent=comp147025_c0_seq1.mrna1;Target=comp147025_c0_seq1 537 530 .
Chr1	stalkie_big_nohaplotig	exon	18365071	18365079	100	-	.	Parent=comp147025_c0_seq1.mrna1;Target=comp147025_c0_seq1 504 496 .
Chr1	stalkie_big_nohaplotig	exon	18367009	18367013	100	-	.	Parent=comp147025_c0_seq1.mrna1;Target=comp147025_c0_seq1 495 491 .
Chr1	stalkie_big_nohaplotig	exon	18368437	18368448	100	-	.	Parent=comp147025_c0_seq1.mrna1;Target=comp147025_c0_seq1 486 475 .
Chr1	stalkie_big_nohaplotig	exon	18370400	18370407	100	-	.	Parent=comp147025_c0_seq1.mrna1;Target=comp147025_c0_seq1 474 467 .
Chr1	stalkie_big_nohaplotig	exon	18377850	18377855	100	-	.	Parent=comp147025_c0_seq1.mrna1;Target=comp147025_c0_seq1 466 461 .
Chr1	stalkie_big_nohaplotig	exon	18380064	18380069	100	-	.	Parent=comp147025_c0_seq1.mrna1;Target=comp147025_c0_seq1 460 455 .
Chr1	stalkie_big_nohaplotig	exon	18381865	18381928	29	-	.	Parent=comp147025_c0_seq1.mrna1;Target=comp147025_c0_seq1 454 436 .
Chr1	stalkie_big_nohaplotig	exon	18404413	18404417	100	-	.	Parent=comp147025_c0_seq1.mrna1;Target=comp147025_c0_seq1 435 431 .
Chr1	stalkie_big_nohaplotig	exon	18404844	18404847	100	-	.	Parent=comp147025_c0_seq1.mrna1;Target=comp147025_c0_seq1 430 427 .
Chr1	stalkie_big_nohaplotig	exon	20299313	20299738	100	-	.	Parent=comp147025_c0_seq1.mrna1;Target=comp147025_c0_seq1 426 1 .
Chr1	stalkie_big_nohaplotig	CDS	20299442	20299627	.	-	0	Parent=comp147025_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18368312	18369087	.	-	.	ID=comp122455_c0_seq1.mrna1;geneID=comp122455_c0_seq1.path1;Name=comp122455_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.0;matches=743;mismatches=33;indels=6;unknowns=0;Target=comp122455_c0_seq1 782 1 .;CDS_Target=comp122455_c0_seq1 326 168 .;locus=RLOC_00006251
Chr1	stalkie_big_nohaplotig	exon	18368312	18369087	95	-	.	Parent=comp122455_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	18368762	18368920	.	-	0	Parent=comp122455_c0_seq1.mrna1
Chr1	gffcl	locus	18391324	18399978	.	+	.	ID=RLOC_00006252;geneIDs=FBgn0035935.2.path1;transcripts=FBgn0035935.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18391324	18399978	.	+	.	ID=FBgn0035935.2.mrna1;geneID=FBgn0035935.2.path1;Name=FBgn0035935.2;Dir=sensecoverage=100.0;identity=99.3;matches=4932;mismatches=33;indels=0;unknowns=0;locus=RLOC_00006252
Chr1	stalkie_big_nohaplotig	exon	18391324	18391524	100	+	.	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 1 201 +
Chr1	stalkie_big_nohaplotig	exon	18391588	18391940	99	+	.	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 202 554 +
Chr1	stalkie_big_nohaplotig	exon	18392003	18392105	99	+	.	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 555 657 +
Chr1	stalkie_big_nohaplotig	exon	18392167	18392365	98	+	.	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 658 856 +
Chr1	stalkie_big_nohaplotig	exon	18392416	18392679	98	+	.	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 857 1120 +
Chr1	stalkie_big_nohaplotig	exon	18392744	18392928	98	+	.	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 1121 1305 +
Chr1	stalkie_big_nohaplotig	exon	18393001	18393204	99	+	.	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 1306 1509 +
Chr1	stalkie_big_nohaplotig	exon	18393255	18393551	99	+	.	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 1510 1806 +
Chr1	stalkie_big_nohaplotig	exon	18394350	18395113	99	+	.	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 1807 2570 +
Chr1	stalkie_big_nohaplotig	exon	18395171	18395330	99	+	.	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 2571 2730 +
Chr1	stalkie_big_nohaplotig	exon	18395388	18395771	99	+	.	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 2731 3114 +
Chr1	stalkie_big_nohaplotig	exon	18395849	18396354	99	+	.	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 3115 3620 +
Chr1	stalkie_big_nohaplotig	exon	18396442	18396579	99	+	.	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 3621 3758 +
Chr1	stalkie_big_nohaplotig	exon	18396658	18396809	100	+	.	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 3759 3910 +
Chr1	stalkie_big_nohaplotig	exon	18396872	18397008	100	+	.	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 3911 4047 +
Chr1	stalkie_big_nohaplotig	exon	18397086	18397267	100	+	.	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 4048 4229 +
Chr1	stalkie_big_nohaplotig	exon	18398687	18398807	98	+	.	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 4230 4350 +
Chr1	stalkie_big_nohaplotig	exon	18399229	18399576	99	+	.	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 4351 4698 +
Chr1	stalkie_big_nohaplotig	exon	18399640	18399740	100	+	.	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 4699 4799 +
Chr1	stalkie_big_nohaplotig	exon	18399813	18399978	99	+	.	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 4800 4965 +
Chr1	stalkie_big_nohaplotig	CDS	18391324	18391524	.	+	0	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 1 201 +
Chr1	stalkie_big_nohaplotig	CDS	18391588	18391940	.	+	0	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 202 554 +
Chr1	stalkie_big_nohaplotig	CDS	18392003	18392105	.	+	1	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 555 657 +
Chr1	stalkie_big_nohaplotig	CDS	18392167	18392365	.	+	0	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 658 856 +
Chr1	stalkie_big_nohaplotig	CDS	18392416	18392679	.	+	2	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 857 1120 +
Chr1	stalkie_big_nohaplotig	CDS	18392744	18392928	.	+	2	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 1121 1305 +
Chr1	stalkie_big_nohaplotig	CDS	18393001	18393204	.	+	0	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 1306 1509 +
Chr1	stalkie_big_nohaplotig	CDS	18393255	18393551	.	+	0	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 1510 1806 +
Chr1	stalkie_big_nohaplotig	CDS	18394350	18395113	.	+	0	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 1807 2570 +
Chr1	stalkie_big_nohaplotig	CDS	18395171	18395330	.	+	1	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 2571 2730 +
Chr1	stalkie_big_nohaplotig	CDS	18395388	18395771	.	+	0	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 2731 3114 +
Chr1	stalkie_big_nohaplotig	CDS	18395849	18396354	.	+	0	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 3115 3620 +
Chr1	stalkie_big_nohaplotig	CDS	18396442	18396579	.	+	1	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 3621 3758 +
Chr1	stalkie_big_nohaplotig	CDS	18396658	18396809	.	+	1	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 3759 3910 +
Chr1	stalkie_big_nohaplotig	CDS	18396872	18397008	.	+	2	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 3911 4047 +
Chr1	stalkie_big_nohaplotig	CDS	18397086	18397267	.	+	0	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 4048 4229 +
Chr1	stalkie_big_nohaplotig	CDS	18398687	18398807	.	+	1	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 4230 4350 +
Chr1	stalkie_big_nohaplotig	CDS	18399229	18399576	.	+	0	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 4351 4698 +
Chr1	stalkie_big_nohaplotig	CDS	18399640	18399740	.	+	0	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 4699 4799 +
Chr1	stalkie_big_nohaplotig	CDS	18399813	18399978	.	+	1	Parent=FBgn0035935.2.mrna1;Target=FBgn0035935.2 4800 4965 +
Chr1	gffcl	locus	18411817	18446674	.	+	.	ID=RLOC_00006253;geneIDs=FBgn0035934.1.path1;transcripts=FBgn0035934.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18411817	18446674	.	+	.	ID=FBgn0035934.1.mrna1;geneID=FBgn0035934.1.path1;Name=FBgn0035934.1;Dir=sensecoverage=100.0;identity=99.2;matches=3708;mismatches=30;indels=1;unknowns=0;Target=FBgn0035934.1 2 79 +;locus=RLOC_00006253
Chr1	stalkie_big_nohaplotig	exon	18411817	18411988	99	+	.	Parent=FBgn0035934.1.mrna1;Target=FBgn0035934.1 1 171 +
Chr1	stalkie_big_nohaplotig	exon	18412137	18412289	100	+	.	Parent=FBgn0035934.1.mrna1;Target=FBgn0035934.1 172 324 +
Chr1	stalkie_big_nohaplotig	exon	18429063	18429219	98	+	.	Parent=FBgn0035934.1.mrna1;Target=FBgn0035934.1 325 481 +
Chr1	stalkie_big_nohaplotig	exon	18429284	18429374	98	+	.	Parent=FBgn0035934.1.mrna1;Target=FBgn0035934.1 482 572 +
Chr1	stalkie_big_nohaplotig	exon	18429487	18429682	99	+	.	Parent=FBgn0035934.1.mrna1;Target=FBgn0035934.1 573 768 +
Chr1	stalkie_big_nohaplotig	exon	18431441	18431548	100	+	.	Parent=FBgn0035934.1.mrna1;Target=FBgn0035934.1 769 876 +
Chr1	stalkie_big_nohaplotig	exon	18434088	18434276	98	+	.	Parent=FBgn0035934.1.mrna1;Target=FBgn0035934.1 877 1065 +
Chr1	stalkie_big_nohaplotig	exon	18437810	18438619	99	+	.	Parent=FBgn0035934.1.mrna1;Target=FBgn0035934.1 1066 1875 +
Chr1	stalkie_big_nohaplotig	exon	18438685	18438999	99	+	.	Parent=FBgn0035934.1.mrna1;Target=FBgn0035934.1 1876 2190 +
Chr1	stalkie_big_nohaplotig	exon	18442427	18442534	100	+	.	Parent=FBgn0035934.1.mrna1;Target=FBgn0035934.1 2191 2298 +
Chr1	stalkie_big_nohaplotig	exon	18442869	18443089	99	+	.	Parent=FBgn0035934.1.mrna1;Target=FBgn0035934.1 2299 2519 +
Chr1	stalkie_big_nohaplotig	exon	18443187	18443547	98	+	.	Parent=FBgn0035934.1.mrna1;Target=FBgn0035934.1 2520 2880 +
Chr1	stalkie_big_nohaplotig	exon	18444910	18445026	99	+	.	Parent=FBgn0035934.1.mrna1;Target=FBgn0035934.1 2881 2997 +
Chr1	stalkie_big_nohaplotig	exon	18445720	18445882	98	+	.	Parent=FBgn0035934.1.mrna1;Target=FBgn0035934.1 2998 3160 +
Chr1	stalkie_big_nohaplotig	exon	18445967	18446079	98	+	.	Parent=FBgn0035934.1.mrna1;Target=FBgn0035934.1 3161 3273 +
Chr1	stalkie_big_nohaplotig	exon	18446138	18446297	96	+	.	Parent=FBgn0035934.1.mrna1;Target=FBgn0035934.1 3274 3433 +
Chr1	stalkie_big_nohaplotig	exon	18446370	18446674	99	+	.	Parent=FBgn0035934.1.mrna1;Target=FBgn0035934.1 3434 3738 +
Chr1	stalkie_big_nohaplotig	CDS	18411818	18411896	.	+	0	Parent=FBgn0035934.1.mrna1
Chr1	gffcl	locus	18428923	18511016	.	-	.	ID=RLOC_00006254;geneIDs=comp154850_c0_seq1.path1,comp159599_c0_seq1.path1,comp162088_c0_seq1.path1;transcripts=comp154850_c0_seq1.mrna1,comp162088_c0_seq1.mrna1,comp159599_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18428923	18511016	.	-	.	ID=comp154850_c0_seq1.mrna1;geneID=comp154850_c0_seq1.path1;Name=comp154850_c0_seq1;Dir=indeterminatecoverage=91.9;identity=90.6;matches=772;mismatches=42;indels=38;unknowns=0;Target=comp154850_c0_seq1 666 514 .;locus=RLOC_00006254
Chr1	stalkie_big_nohaplotig	exon	18428923	18428931	100	-	.	Parent=comp154850_c0_seq1.mrna1;Target=comp154850_c0_seq1 845 837 .
Chr1	stalkie_big_nohaplotig	exon	18430471	18430478	100	-	.	Parent=comp154850_c0_seq1.mrna1;Target=comp154850_c0_seq1 836 829 .
Chr1	stalkie_big_nohaplotig	exon	18443012	18443015	100	-	.	Parent=comp154850_c0_seq1.mrna1;Target=comp154850_c0_seq1 828 825 .
Chr1	stalkie_big_nohaplotig	exon	18446113	18446115	100	-	.	Parent=comp154850_c0_seq1.mrna1;Target=comp154850_c0_seq1 824 822 .
Chr1	stalkie_big_nohaplotig	exon	18448306	18448319	42	-	.	Parent=comp154850_c0_seq1.mrna1;Target=comp154850_c0_seq1 821 794 .
Chr1	stalkie_big_nohaplotig	exon	18455257	18455266	100	-	.	Parent=comp154850_c0_seq1.mrna1;Target=comp154850_c0_seq1 793 784 .
Chr1	stalkie_big_nohaplotig	exon	18461980	18461985	100	-	.	Parent=comp154850_c0_seq1.mrna1;Target=comp154850_c0_seq1 783 778 .
Chr1	stalkie_big_nohaplotig	exon	18469987	18469989	100	-	.	Parent=comp154850_c0_seq1.mrna1;Target=comp154850_c0_seq1 777 775 .
Chr1	stalkie_big_nohaplotig	exon	18477077	18477082	100	-	.	Parent=comp154850_c0_seq1.mrna1;Target=comp154850_c0_seq1 774 769 .
Chr1	stalkie_big_nohaplotig	exon	18485254	18485264	72	-	.	Parent=comp154850_c0_seq1.mrna1;Target=comp154850_c0_seq1 768 758 .
Chr1	stalkie_big_nohaplotig	exon	18491056	18491065	100	-	.	Parent=comp154850_c0_seq1.mrna1;Target=comp154850_c0_seq1 757 748 .
Chr1	stalkie_big_nohaplotig	exon	18494480	18494525	54	-	.	Parent=comp154850_c0_seq1.mrna1;Target=comp154850_c0_seq1 747 708 .
Chr1	stalkie_big_nohaplotig	exon	18502345	18502348	100	-	.	Parent=comp154850_c0_seq1.mrna1;Target=comp154850_c0_seq1 707 704 .
Chr1	stalkie_big_nohaplotig	exon	18507893	18507900	100	-	.	Parent=comp154850_c0_seq1.mrna1;Target=comp154850_c0_seq1 703 696 .
Chr1	stalkie_big_nohaplotig	exon	18508585	18508590	100	-	.	Parent=comp154850_c0_seq1.mrna1;Target=comp154850_c0_seq1 695 690 .
Chr1	stalkie_big_nohaplotig	exon	18508732	18508734	100	-	.	Parent=comp154850_c0_seq1.mrna1;Target=comp154850_c0_seq1 689 687 .
Chr1	stalkie_big_nohaplotig	exon	18510347	18511016	94	-	.	Parent=comp154850_c0_seq1.mrna1;Target=comp154850_c0_seq1 686 1 .
Chr1	stalkie_big_nohaplotig	CDS	18510367	18510510	.	-	0	Parent=comp154850_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18461011	18462175	.	-	.	ID=comp162088_c0_seq1.mrna1;geneID=comp162088_c0_seq1.path1;Name=comp162088_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=1144;mismatches=21;indels=9;unknowns=0;Target=comp162088_c0_seq1 1174 1 .;CDS_Target=comp162088_c0_seq1 782 459 .;locus=RLOC_00006254
Chr1	stalkie_big_nohaplotig	exon	18461011	18462175	97	-	.	Parent=comp162088_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	18461396	18461718	.	-	0	Parent=comp162088_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18508388	18510222	.	-	.	ID=comp159599_c0_seq1.mrna1;geneID=comp159599_c0_seq1.path1;Name=comp159599_c0_seq1;Dir=indeterminatecoverage=99.1;identity=95.3;matches=1696;mismatches=34;indels=49;unknowns=0;Target=comp159599_c0_seq1 1283 1143 .;locus=RLOC_00006254
Chr1	stalkie_big_nohaplotig	exon	18508388	18509365	96	-	.	Parent=comp159599_c0_seq1.mrna1;Target=comp159599_c0_seq1 1757 781 .
Chr1	stalkie_big_nohaplotig	exon	18509433	18510222	93	-	.	Parent=comp159599_c0_seq1.mrna1;Target=comp159599_c0_seq1 780 17 .
Chr1	stalkie_big_nohaplotig	CDS	18508862	18509003	.	-	0	Parent=comp159599_c0_seq1.mrna1
Chr1	gffcl	locus	18448355	18448710	.	-	.	ID=RLOC_00006255;geneIDs=comp94754_c0_seq1.path1;transcripts=comp94754_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18448355	18448710	.	-	.	ID=comp94754_c0_seq1.mrna1;geneID=comp94754_c0_seq1.path1;Name=comp94754_c0_seq1;Dir=indeterminatecoverage=96.0;identity=98.9;matches=352;mismatches=4;indels=0;unknowns=0;Target=comp94754_c0_seq1 371 16 .;CDS_Target=comp94754_c0_seq1 74 18 .;locus=RLOC_00006255
Chr1	stalkie_big_nohaplotig	exon	18448355	18448710	98	-	.	Parent=comp94754_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	18448652	18448708	.	-	0	Parent=comp94754_c0_seq1.mrna1
Chr1	gffcl	locus	18449905	18451950	.	+	.	ID=RLOC_00006256;geneIDs=FBgn0037607.2.path1;transcripts=FBgn0037607.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18449905	18451950	.	+	.	ID=FBgn0037607.2.mrna1;geneID=FBgn0037607.2.path1;Name=FBgn0037607.2;Dir=indeterminatecoverage=100.0;identity=99.4;matches=2033;mismatches=13;indels=0;unknowns=0;Target=FBgn0037607.2 2046 1 .;locus=RLOC_00006256
Chr1	stalkie_big_nohaplotig	exon	18449905	18451950	99	+	.	Parent=FBgn0037607.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	18449905	18451950	.	+	0	Parent=FBgn0037607.2.mrna1
Chr1	gffcl	locus	18454002	18465491	.	.	.	ID=RLOC_00006257;geneIDs=FBgn0004401.1.path1,comp116687_c0_seq1.path1,comp235313_c0_seq1.path1;transcripts=FBgn0004401.1.mrna1,comp116687_c0_seq1.mrna1,comp235313_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18454002	18465491	.	+	.	ID=FBgn0004401.1.mrna1;geneID=FBgn0004401.1.path1;Name=FBgn0004401.1;Dir=sensecoverage=100.0;identity=99.8;matches=2057;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006257
Chr1	stalkie_big_nohaplotig	exon	18454002	18454027	100	+	.	Parent=FBgn0004401.1.mrna1;Target=FBgn0004401.1 1 26 +
Chr1	stalkie_big_nohaplotig	exon	18455739	18456063	100	+	.	Parent=FBgn0004401.1.mrna1;Target=FBgn0004401.1 27 351 +
Chr1	stalkie_big_nohaplotig	exon	18460254	18460471	100	+	.	Parent=FBgn0004401.1.mrna1;Target=FBgn0004401.1 352 569 +
Chr1	stalkie_big_nohaplotig	exon	18464000	18465491	99	+	.	Parent=FBgn0004401.1.mrna1;Target=FBgn0004401.1 570 2061 +
Chr1	stalkie_big_nohaplotig	CDS	18454002	18454027	.	+	0	Parent=FBgn0004401.1.mrna1;Target=FBgn0004401.1 1 26 +
Chr1	stalkie_big_nohaplotig	CDS	18455739	18456063	.	+	1	Parent=FBgn0004401.1.mrna1;Target=FBgn0004401.1 27 351 +
Chr1	stalkie_big_nohaplotig	CDS	18460254	18460471	.	+	0	Parent=FBgn0004401.1.mrna1;Target=FBgn0004401.1 352 569 +
Chr1	stalkie_big_nohaplotig	CDS	18464000	18465491	.	+	1	Parent=FBgn0004401.1.mrna1;Target=FBgn0004401.1 570 2061 +
Chr1	stalkie_big_nohaplotig	mRNA	18460448	18460840	.	+	.	ID=comp116687_c0_seq1.mrna1;geneID=comp116687_c0_seq1.path1;Name=comp116687_c0_seq1;Dir=indeterminatecoverage=96.1;identity=99.2;matches=392;mismatches=1;indels=2;unknowns=0;Target=comp116687_c0_seq1 395 1 .;CDS_Target=comp116687_c0_seq1 128 3 .;locus=RLOC_00006257
Chr1	stalkie_big_nohaplotig	exon	18460448	18460840	99	+	.	Parent=comp116687_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	18460450	18460575	.	+	0	Parent=comp116687_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18463744	18464021	.	-	.	ID=comp235313_c0_seq1.mrna1;geneID=comp235313_c0_seq1.path1;Name=comp235313_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=278;mismatches=0;indels=0;unknowns=0;Target=comp235313_c0_seq1 278 1 .;CDS_Target=comp235313_c0_seq1 99 1 .;locus=RLOC_00006257
Chr1	stalkie_big_nohaplotig	exon	18463744	18464021	100	-	.	Parent=comp235313_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	18463923	18464021	.	-	0	Parent=comp235313_c0_seq1.mrna1
Chr1	gffcl	locus	18471092	18474655	.	-	.	ID=RLOC_00006258;geneIDs=FBgn0036742.1.path1;transcripts=FBgn0036742.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18471092	18474655	.	-	.	ID=FBgn0036742.1.mrna1;geneID=FBgn0036742.1.path1;Name=FBgn0036742.1;Dir=sensecoverage=94.6;identity=99.8;matches=935;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006258
Chr1	stalkie_big_nohaplotig	exon	18471092	18471337	100	-	.	Parent=FBgn0036742.1.mrna1;Target=FBgn0036742.1 745 990 +
Chr1	stalkie_big_nohaplotig	exon	18473620	18473900	100	-	.	Parent=FBgn0036742.1.mrna1;Target=FBgn0036742.1 464 744 +
Chr1	stalkie_big_nohaplotig	exon	18474112	18474304	99	-	.	Parent=FBgn0036742.1.mrna1;Target=FBgn0036742.1 271 463 +
Chr1	stalkie_big_nohaplotig	exon	18474439	18474655	99	-	.	Parent=FBgn0036742.1.mrna1;Target=FBgn0036742.1 54 270 +
Chr1	stalkie_big_nohaplotig	CDS	18471092	18471337	.	-	0	Parent=FBgn0036742.1.mrna1;Target=FBgn0036742.1 745 990 +
Chr1	stalkie_big_nohaplotig	CDS	18473620	18473900	.	-	2	Parent=FBgn0036742.1.mrna1;Target=FBgn0036742.1 464 744 +
Chr1	stalkie_big_nohaplotig	CDS	18474112	18474304	.	-	0	Parent=FBgn0036742.1.mrna1;Target=FBgn0036742.1 271 463 +
Chr1	stalkie_big_nohaplotig	CDS	18474439	18474654	.	-	0	Parent=FBgn0036742.1.mrna1;Target=FBgn0036742.1 55 270 +
Chr1	gffcl	locus	18503914	18504279	.	-	.	ID=RLOC_00006259;geneIDs=FBgn0050148.2.path1;transcripts=FBgn0050148.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18503914	18504279	.	-	.	ID=FBgn0050148.2.mrna1;geneID=FBgn0050148.2.path1;Name=FBgn0050148.2;Dir=indeterminatecoverage=100.0;identity=98.4;matches=360;mismatches=6;indels=0;unknowns=0;Target=FBgn0050148.2 366 1 .;locus=RLOC_00006259
Chr1	stalkie_big_nohaplotig	exon	18503914	18504279	98	-	.	Parent=FBgn0050148.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	18503914	18504279	.	-	0	Parent=FBgn0050148.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18556230	18556532	.	-	.	ID=comp133711_c0_seq1.mrna1;geneID=comp133711_c0_seq1.path1;Name=comp133711_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=295;mismatches=8;indels=0;unknowns=0;Target=comp133711_c0_seq1 303 1 .;CDS_Target=comp133711_c0_seq1 301 170 .;locus=RLOC_00006260
Chr1	stalkie_big_nohaplotig	exon	18556230	18556532	97	-	.	Parent=comp133711_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	18556232	18556363	.	-	0	Parent=comp133711_c0_seq1.mrna1
Chr1	gffcl	locus	18512025	18523208	.	-	.	ID=RLOC_00006261;geneIDs=FBgn0036741.1.path1,comp158657_c6_seq1.path1;transcripts=FBgn0036741.1.mrna1,comp158657_c6_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18512025	18523208	.	-	.	ID=FBgn0036741.1.mrna1;geneID=FBgn0036741.1.path1;Name=FBgn0036741.1;Dir=sensecoverage=92.9;identity=99.8;matches=2658;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006261
Chr1	stalkie_big_nohaplotig	exon	18512025	18512223	100	-	.	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 2667 2865 +
Chr1	stalkie_big_nohaplotig	exon	18512299	18512424	100	-	.	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 2541 2666 +
Chr1	stalkie_big_nohaplotig	exon	18512486	18512661	100	-	.	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 2365 2540 +
Chr1	stalkie_big_nohaplotig	exon	18512734	18512947	100	-	.	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 2151 2364 +
Chr1	stalkie_big_nohaplotig	exon	18514045	18514381	100	-	.	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 1814 2150 +
Chr1	stalkie_big_nohaplotig	exon	18514447	18514539	100	-	.	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 1721 1813 +
Chr1	stalkie_big_nohaplotig	exon	18514833	18514986	100	-	.	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 1567 1720 +
Chr1	stalkie_big_nohaplotig	exon	18515062	18515253	100	-	.	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 1375 1566 +
Chr1	stalkie_big_nohaplotig	exon	18515887	18516126	100	-	.	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 1135 1374 +
Chr1	stalkie_big_nohaplotig	exon	18516192	18516357	99	-	.	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 969 1134 +
Chr1	stalkie_big_nohaplotig	exon	18516426	18516760	99	-	.	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 634 968 +
Chr1	stalkie_big_nohaplotig	exon	18522719	18522858	99	-	.	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 494 633 +
Chr1	stalkie_big_nohaplotig	exon	18522919	18523208	99	-	.	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 204 493 +
Chr1	stalkie_big_nohaplotig	CDS	18512025	18512223	.	-	1	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 2667 2865 +
Chr1	stalkie_big_nohaplotig	CDS	18512299	18512424	.	-	1	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 2541 2666 +
Chr1	stalkie_big_nohaplotig	CDS	18512486	18512661	.	-	0	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 2365 2540 +
Chr1	stalkie_big_nohaplotig	CDS	18512734	18512947	.	-	1	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 2151 2364 +
Chr1	stalkie_big_nohaplotig	CDS	18514045	18514381	.	-	2	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 1814 2150 +
Chr1	stalkie_big_nohaplotig	CDS	18514447	18514539	.	-	2	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 1721 1813 +
Chr1	stalkie_big_nohaplotig	CDS	18514833	18514986	.	-	0	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 1567 1720 +
Chr1	stalkie_big_nohaplotig	CDS	18515062	18515253	.	-	0	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 1375 1566 +
Chr1	stalkie_big_nohaplotig	CDS	18515887	18516126	.	-	0	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 1135 1374 +
Chr1	stalkie_big_nohaplotig	CDS	18516192	18516357	.	-	1	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 969 1134 +
Chr1	stalkie_big_nohaplotig	CDS	18516426	18516760	.	-	0	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 634 968 +
Chr1	stalkie_big_nohaplotig	CDS	18522719	18522858	.	-	2	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 494 633 +
Chr1	stalkie_big_nohaplotig	CDS	18522919	18523207	.	-	0	Parent=FBgn0036741.1.mrna1;Target=FBgn0036741.1 205 493 +
Chr1	stalkie_big_nohaplotig	mRNA	18516738	18518405	.	-	.	ID=comp158657_c6_seq1.mrna1;geneID=comp158657_c6_seq1.path1;Name=comp158657_c6_seq1;Dir=antisensecoverage=100.0;identity=96.1;matches=1443;mismatches=7;indels=52;unknowns=0;Target=comp158657_c6_seq1 1014 1196 .;locus=RLOC_00006261
Chr1	stalkie_big_nohaplotig	exon	18516738	18516760	100	-	.	Parent=comp158657_c6_seq1.mrna1;Target=comp158657_c6_seq1 1 23 -
Chr1	stalkie_big_nohaplotig	exon	18516968	18518405	96	-	.	Parent=comp158657_c6_seq1.mrna1;Target=comp158657_c6_seq1 24 1491 -
Chr1	stalkie_big_nohaplotig	CDS	18517928	18518110	.	-	0	Parent=comp158657_c6_seq1.mrna1
Chr1	gffcl	locus	18648713	18649540	.	-	.	ID=RLOC_00006264;geneIDs=comp71644_c0_seq1.path1;transcripts=comp71644_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18648713	18649540	.	-	.	ID=comp71644_c0_seq1.mrna1;geneID=comp71644_c0_seq1.path1;Name=comp71644_c0_seq1;Dir=sensecoverage=95.7;identity=95.2;matches=413;mismatches=12;indels=9;unknowns=0;locus=RLOC_00006264
Chr1	stalkie_big_nohaplotig	exon	18648713	18648873	92	-	.	Parent=comp71644_c0_seq1.mrna1;Target=comp71644_c0_seq1 274 425 +
Chr1	stalkie_big_nohaplotig	exon	18648940	18648981	97	-	.	Parent=comp71644_c0_seq1.mrna1;Target=comp71644_c0_seq1 232 273 +
Chr1	stalkie_big_nohaplotig	exon	18649037	18649075	97	-	.	Parent=comp71644_c0_seq1.mrna1;Target=comp71644_c0_seq1 193 231 +
Chr1	stalkie_big_nohaplotig	exon	18649349	18649540	96	-	.	Parent=comp71644_c0_seq1.mrna1;Target=comp71644_c0_seq1 1 192 +
Chr1	stalkie_big_nohaplotig	CDS	18648786	18648873	.	-	1	Parent=comp71644_c0_seq1.mrna1;Target=comp71644_c0_seq1 274 361 +
Chr1	stalkie_big_nohaplotig	CDS	18648940	18648981	.	-	1	Parent=comp71644_c0_seq1.mrna1;Target=comp71644_c0_seq1 232 273 +
Chr1	stalkie_big_nohaplotig	CDS	18649037	18649075	.	-	1	Parent=comp71644_c0_seq1.mrna1;Target=comp71644_c0_seq1 193 231 +
Chr1	stalkie_big_nohaplotig	CDS	18649349	18649482	.	-	0	Parent=comp71644_c0_seq1.mrna1;Target=comp71644_c0_seq1 59 192 +
Chr1	gffcl	locus	18668083	18680545	.	-	.	ID=RLOC_00006265;geneIDs=FBgn0052255.1.path1;transcripts=FBgn0052255.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18668083	18680545	.	-	.	ID=FBgn0052255.1.mrna1;geneID=FBgn0052255.1.path1;Name=FBgn0052255.1;Dir=sensecoverage=98.3;identity=99.5;matches=1371;mismatches=6;indels=1;unknowns=0;locus=RLOC_00006265
Chr1	stalkie_big_nohaplotig	exon	18668083	18668175	100	-	.	Parent=FBgn0052255.1.mrna1;Target=FBgn0052255.1 1309 1401 +
Chr1	stalkie_big_nohaplotig	exon	18668374	18668626	99	-	.	Parent=FBgn0052255.1.mrna1;Target=FBgn0052255.1 1056 1308 +
Chr1	stalkie_big_nohaplotig	exon	18668700	18668854	99	-	.	Parent=FBgn0052255.1.mrna1;Target=FBgn0052255.1 902 1055 +
Chr1	stalkie_big_nohaplotig	exon	18668946	18669227	99	-	.	Parent=FBgn0052255.1.mrna1;Target=FBgn0052255.1 620 901 +
Chr1	stalkie_big_nohaplotig	exon	18669291	18669485	100	-	.	Parent=FBgn0052255.1.mrna1;Target=FBgn0052255.1 425 619 +
Chr1	stalkie_big_nohaplotig	exon	18671016	18671165	98	-	.	Parent=FBgn0052255.1.mrna1;Target=FBgn0052255.1 275 424 +
Chr1	stalkie_big_nohaplotig	exon	18678739	18678780	100	-	.	Parent=FBgn0052255.1.mrna1;Target=FBgn0052255.1 233 274 +
Chr1	stalkie_big_nohaplotig	exon	18680260	18680328	100	-	.	Parent=FBgn0052255.1.mrna1;Target=FBgn0052255.1 164 232 +
Chr1	stalkie_big_nohaplotig	exon	18680407	18680545	100	-	.	Parent=FBgn0052255.1.mrna1;Target=FBgn0052255.1 25 163 +
Chr1	stalkie_big_nohaplotig	CDS	18668083	18668175	.	-	2	Parent=FBgn0052255.1.mrna1;Target=FBgn0052255.1 1309 1401 +
Chr1	stalkie_big_nohaplotig	CDS	18668374	18668626	.	-	0	Parent=FBgn0052255.1.mrna1;Target=FBgn0052255.1 1056 1308 +
Chr1	stalkie_big_nohaplotig	CDS	18668700	18668854	.	-	2	Parent=FBgn0052255.1.mrna1;Target=FBgn0052255.1 902 1055 +
Chr1	stalkie_big_nohaplotig	CDS	18668946	18669227	.	-	2	Parent=FBgn0052255.1.mrna1;Target=FBgn0052255.1 620 901 +
Chr1	stalkie_big_nohaplotig	CDS	18669291	18669485	.	-	2	Parent=FBgn0052255.1.mrna1;Target=FBgn0052255.1 425 619 +
Chr1	stalkie_big_nohaplotig	CDS	18671016	18671165	.	-	2	Parent=FBgn0052255.1.mrna1;Target=FBgn0052255.1 275 424 +
Chr1	stalkie_big_nohaplotig	CDS	18678739	18678780	.	-	2	Parent=FBgn0052255.1.mrna1;Target=FBgn0052255.1 233 274 +
Chr1	stalkie_big_nohaplotig	CDS	18680260	18680328	.	-	2	Parent=FBgn0052255.1.mrna1;Target=FBgn0052255.1 164 232 +
Chr1	stalkie_big_nohaplotig	CDS	18680407	18680545	.	-	0	Parent=FBgn0052255.1.mrna1;Target=FBgn0052255.1 25 163 +
Chr1	gffcl	locus	18792524	18793889	.	+	.	ID=RLOC_00006266;geneIDs=FBgn0050357.2.path1;transcripts=FBgn0050357.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18792524	18793889	.	+	.	ID=FBgn0050357.2.mrna1;geneID=FBgn0050357.2.path1;Name=FBgn0050357.2;Dir=sensecoverage=100.0;identity=99.3;matches=1296;mismatches=9;indels=0;unknowns=0;locus=RLOC_00006266
Chr1	stalkie_big_nohaplotig	exon	18792524	18792582	100	+	.	Parent=FBgn0050357.2.mrna1;Target=FBgn0050357.2 1 59 +
Chr1	stalkie_big_nohaplotig	exon	18792644	18793889	99	+	.	Parent=FBgn0050357.2.mrna1;Target=FBgn0050357.2 60 1305 +
Chr1	stalkie_big_nohaplotig	CDS	18792524	18792582	.	+	0	Parent=FBgn0050357.2.mrna1;Target=FBgn0050357.2 1 59 +
Chr1	stalkie_big_nohaplotig	CDS	18792644	18793889	.	+	1	Parent=FBgn0050357.2.mrna1;Target=FBgn0050357.2 60 1305 +
Chr1	gffcl	locus	18834415	18835012	.	+	.	ID=RLOC_00006267;geneIDs=comp83962_c0_seq1.path1;transcripts=comp83962_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18834415	18835012	.	+	.	ID=comp83962_c0_seq1.mrna1;geneID=comp83962_c0_seq1.path1;Name=comp83962_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.7;matches=411;mismatches=23;indels=0;unknowns=0;Target=comp83962_c0_seq1 432 343 .;locus=RLOC_00006267
Chr1	stalkie_big_nohaplotig	exon	18834415	18834723	93	+	.	Parent=comp83962_c0_seq1.mrna1;Target=comp83962_c0_seq1 309 1 .
Chr1	stalkie_big_nohaplotig	exon	18834888	18835012	97	+	.	Parent=comp83962_c0_seq1.mrna1;Target=comp83962_c0_seq1 434 310 .
Chr1	stalkie_big_nohaplotig	CDS	18834921	18835010	.	+	0	Parent=comp83962_c0_seq1.mrna1
Chr1	gffcl	locus	18883295	18895530	.	+	.	ID=RLOC_00006268;geneIDs=comp142122_c0_seq1.path1;transcripts=comp142122_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18883295	18895530	.	+	.	ID=comp142122_c0_seq1.mrna1;geneID=comp142122_c0_seq1.path1;Name=comp142122_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=365;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006268
Chr1	stalkie_big_nohaplotig	exon	18883295	18883373	100	+	.	Parent=comp142122_c0_seq1.mrna1;Target=comp142122_c0_seq1 1 79 +
Chr1	stalkie_big_nohaplotig	exon	18883514	18883578	98	+	.	Parent=comp142122_c0_seq1.mrna1;Target=comp142122_c0_seq1 80 144 +
Chr1	stalkie_big_nohaplotig	exon	18895309	18895530	100	+	.	Parent=comp142122_c0_seq1.mrna1;Target=comp142122_c0_seq1 145 366 +
Chr1	stalkie_big_nohaplotig	CDS	18883567	18883578	.	+	0	Parent=comp142122_c0_seq1.mrna1;Target=comp142122_c0_seq1 133 144 +
Chr1	stalkie_big_nohaplotig	CDS	18895309	18895464	.	+	0	Parent=comp142122_c0_seq1.mrna1;Target=comp142122_c0_seq1 145 300 +
Chr1	gffcl	locus	18893894	18893979	.	+	.	ID=RLOC_00006269;geneIDs=comp150854_c0_seq1.path1;transcripts=comp150854_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18893894	18893979	.	+	.	ID=comp150854_c0_seq1.mrna1;geneID=comp150854_c0_seq1.path1;Name=comp150854_c0_seq1;Dir=indeterminatecoverage=9.1;identity=100.0;matches=86;mismatches=0;indels=0;unknowns=0;Target=comp150854_c0_seq1 86 1 .;locus=RLOC_00006269
Chr1	stalkie_big_nohaplotig	exon	18893894	18893979	100	+	.	Parent=comp150854_c0_seq1.mrna1
Chr1	gffcl	locus	18903477	18904508	.	-	.	ID=RLOC_00006270;geneIDs=Dp_FBgn0244711.1.path3;transcripts=Dp_FBgn0244711.1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	18903477	18904508	.	-	.	ID=Dp_FBgn0244711.1.mrna3;geneID=Dp_FBgn0244711.1.path3;Name=Dp_FBgn0244711.1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1021;mismatches=11;indels=0;unknowns=0;Target=Dp_FBgn0244711.1 1032 1 .;locus=RLOC_00006270
Chr1	stalkie_big_nohaplotig	exon	18903477	18904508	98	-	.	Parent=Dp_FBgn0244711.1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	18903477	18904508	.	-	0	Parent=Dp_FBgn0244711.1.mrna3
Chr1	gffcl	locus	18996933	18997974	.	+	.	ID=RLOC_00006271;geneIDs=FBgn0037099.path1;transcripts=FBgn0037099.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18996933	18997974	.	+	.	ID=FBgn0037099.mrna1;geneID=FBgn0037099.path1;Name=FBgn0037099;Dir=sensecoverage=100.0;identity=98.8;matches=812;mismatches=10;indels=0;unknowns=0;locus=RLOC_00006271
Chr1	stalkie_big_nohaplotig	exon	18996933	18997508	98	+	.	Parent=FBgn0037099.mrna1;Target=FBgn0037099 1 576 +
Chr1	stalkie_big_nohaplotig	exon	18997581	18997788	99	+	.	Parent=FBgn0037099.mrna1;Target=FBgn0037099 577 784 +
Chr1	stalkie_big_nohaplotig	exon	18997937	18997974	100	+	.	Parent=FBgn0037099.mrna1;Target=FBgn0037099 785 822 +
Chr1	stalkie_big_nohaplotig	CDS	18996933	18997508	.	+	0	Parent=FBgn0037099.mrna1;Target=FBgn0037099 1 576 +
Chr1	stalkie_big_nohaplotig	CDS	18997581	18997788	.	+	0	Parent=FBgn0037099.mrna1;Target=FBgn0037099 577 784 +
Chr1	stalkie_big_nohaplotig	CDS	18997937	18997974	.	+	2	Parent=FBgn0037099.mrna1;Target=FBgn0037099 785 822 +
Chr1	gffcl	locus	18999395	18999822	.	+	.	ID=RLOC_00006272;geneIDs=FBgn0034918.path1;transcripts=FBgn0034918.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	18999395	18999822	.	+	.	ID=FBgn0034918.mrna1;geneID=FBgn0034918.path1;Name=FBgn0034918;Dir=sensecoverage=95.9;identity=99.7;matches=304;mismatches=0;indels=1;unknowns=0;locus=RLOC_00006272
Chr1	stalkie_big_nohaplotig	exon	18999395	18999487	100	+	.	Parent=FBgn0034918.mrna1;Target=FBgn0034918 14 106 +
Chr1	stalkie_big_nohaplotig	exon	18999560	18999645	100	+	.	Parent=FBgn0034918.mrna1;Target=FBgn0034918 107 192 +
Chr1	stalkie_big_nohaplotig	exon	18999698	18999822	99	+	.	Parent=FBgn0034918.mrna1;Target=FBgn0034918 193 318 +
Chr1	stalkie_big_nohaplotig	CDS	18999397	18999487	.	+	0	Parent=FBgn0034918.mrna1;Target=FBgn0034918 16 106 +
Chr1	stalkie_big_nohaplotig	CDS	18999560	18999645	.	+	2	Parent=FBgn0034918.mrna1;Target=FBgn0034918 107 192 +
Chr1	stalkie_big_nohaplotig	CDS	18999698	18999822	.	+	0	Parent=FBgn0034918.mrna1;Target=FBgn0034918 193 318 +
Chr1	gffcl	locus	19003513	19013567	.	-	.	ID=RLOC_00006273;geneIDs=comp159510_c0_seq1.path1;transcripts=comp159510_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19003513	19013567	.	-	.	ID=comp159510_c0_seq1.mrna1;geneID=comp159510_c0_seq1.path1;Name=comp159510_c0_seq1;Dir=sensecoverage=100.0;identity=99.1;matches=1007;mismatches=9;indels=0;unknowns=0;locus=RLOC_00006273
Chr1	stalkie_big_nohaplotig	exon	19003513	19003638	99	-	.	Parent=comp159510_c0_seq1.mrna1;Target=comp159510_c0_seq1 891 1016 +
Chr1	stalkie_big_nohaplotig	exon	19003727	19003738	100	-	.	Parent=comp159510_c0_seq1.mrna1;Target=comp159510_c0_seq1 879 890 +
Chr1	stalkie_big_nohaplotig	exon	19003967	19004300	99	-	.	Parent=comp159510_c0_seq1.mrna1;Target=comp159510_c0_seq1 545 878 +
Chr1	stalkie_big_nohaplotig	exon	19007459	19007701	99	-	.	Parent=comp159510_c0_seq1.mrna1;Target=comp159510_c0_seq1 302 544 +
Chr1	stalkie_big_nohaplotig	exon	19013267	19013567	99	-	.	Parent=comp159510_c0_seq1.mrna1;Target=comp159510_c0_seq1 1 301 +
Chr1	stalkie_big_nohaplotig	CDS	19003571	19003638	.	-	2	Parent=comp159510_c0_seq1.mrna1;Target=comp159510_c0_seq1 891 958 +
Chr1	stalkie_big_nohaplotig	CDS	19003727	19003738	.	-	2	Parent=comp159510_c0_seq1.mrna1;Target=comp159510_c0_seq1 879 890 +
Chr1	stalkie_big_nohaplotig	CDS	19003967	19004300	.	-	0	Parent=comp159510_c0_seq1.mrna1;Target=comp159510_c0_seq1 545 878 +
Chr1	stalkie_big_nohaplotig	CDS	19007459	19007653	.	-	0	Parent=comp159510_c0_seq1.mrna1;Target=comp159510_c0_seq1 350 544 +
Chr1	gffcl	locus	19041360	19042814	.	+	.	ID=RLOC_00006275;geneIDs=comp145071_c0_seq1.path1,comp162049_c0_seq1.path1;transcripts=comp162049_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19041360	19042514	.	+	.	ID=comp162049_c0_seq1.mrna1;geneID=comp162049_c0_seq1.path1;Name=comp162049_c0_seq1;Dir=indeterminatecoverage=95.3;identity=96.4;matches=1120;mismatches=12;indels=30;unknowns=0;Target=comp162049_c0_seq1 1164 26 .;CDS_Target=comp162049_c0_seq1 677 564 .;locus=RLOC_00006275
Chr1	stalkie_big_nohaplotig	exon	19041360	19042514	96	+	.	Parent=comp162049_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19041898	19042004	.	+	0	Parent=comp162049_c0_seq1.mrna1
Chr1	gffcl	locus	19051112	19051420	.	+	.	ID=RLOC_00006276;geneIDs=comp139587_c1_seq1.path1;transcripts=comp139587_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19051112	19051420	.	+	.	ID=comp139587_c1_seq1.mrna1;geneID=comp139587_c1_seq1.path1;Name=comp139587_c1_seq1;Dir=indeterminatecoverage=88.3;identity=88.3;matches=273;mismatches=22;indels=14;unknowns=0;Target=comp139587_c1_seq1 304 10 .;CDS_Target=comp139587_c1_seq1 100 11 .;locus=RLOC_00006276
Chr1	stalkie_big_nohaplotig	exon	19051112	19051420	88	+	.	Parent=comp139587_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19051113	19051202	.	+	0	Parent=comp139587_c1_seq1.mrna1
Chr1	gffcl	locus	19055415	19055981	.	-	.	ID=RLOC_00006277;geneIDs=FBgn0004636.path1,FBgn0004636.1.path1;transcripts=FBgn0004636.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19055415	19055981	.	-	.	ID=FBgn0004636.1.mrna1;geneID=FBgn0004636.1.path1;Name=FBgn0004636.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=566;mismatches=1;indels=0;unknowns=0;Target=FBgn0004636.1 567 1 .;locus=RLOC_00006277
Chr1	stalkie_big_nohaplotig	exon	19055415	19055981	99	-	.	Parent=FBgn0004636.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19055415	19055981	.	-	0	Parent=FBgn0004636.1.mrna1
Chr1	gffcl	locus	19059672	19061798	.	-	.	ID=RLOC_00006278;geneIDs=FBgn0042712.1.path1;transcripts=FBgn0042712.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19059672	19061798	.	-	.	ID=FBgn0042712.1.mrna1;geneID=FBgn0042712.1.path1;Name=FBgn0042712.1;Dir=sensecoverage=100.0;identity=99.4;matches=2036;mismatches=13;indels=0;unknowns=0;locus=RLOC_00006278
Chr1	stalkie_big_nohaplotig	exon	19059672	19060753	99	-	.	Parent=FBgn0042712.1.mrna1;Target=FBgn0042712.1 968 2049 +
Chr1	stalkie_big_nohaplotig	exon	19060832	19061798	99	-	.	Parent=FBgn0042712.1.mrna1;Target=FBgn0042712.1 1 967 +
Chr1	stalkie_big_nohaplotig	CDS	19059672	19060753	.	-	2	Parent=FBgn0042712.1.mrna1;Target=FBgn0042712.1 968 2049 +
Chr1	stalkie_big_nohaplotig	CDS	19060832	19061798	.	-	0	Parent=FBgn0042712.1.mrna1;Target=FBgn0042712.1 1 967 +
Chr1	gffcl	locus	19064774	19065063	.	+	.	ID=RLOC_00006279;geneIDs=FBgn0035285.1.path1;transcripts=FBgn0035285.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19064774	19065063	.	+	.	ID=FBgn0035285.1.mrna1;geneID=FBgn0035285.1.path1;Name=FBgn0035285.1;Dir=indeterminatecoverage=45.4;identity=99.7;matches=289;mismatches=1;indels=0;unknowns=0;Target=FBgn0035285.1 290 1 .;locus=RLOC_00006279
Chr1	stalkie_big_nohaplotig	exon	19064774	19065063	99	+	.	Parent=FBgn0035285.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19064774	19065063	.	+	0	Parent=FBgn0035285.1.mrna1
Chr1	gffcl	locus	19164501	19164856	.	-	.	ID=RLOC_00006280;geneIDs=comp135369_c0_seq1.path1;transcripts=comp135369_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19164501	19164856	.	-	.	ID=comp135369_c0_seq1.mrna1;geneID=comp135369_c0_seq1.path1;Name=comp135369_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=355;mismatches=1;indels=0;unknowns=0;Target=comp135369_c0_seq1 356 1 .;CDS_Target=comp135369_c0_seq1 189 1 .;locus=RLOC_00006280
Chr1	stalkie_big_nohaplotig	exon	19164501	19164856	99	-	.	Parent=comp135369_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19164668	19164856	.	-	0	Parent=comp135369_c0_seq1.mrna1
Chr1	gffcl	locus	19182945	19183135	.	+	.	ID=RLOC_00006281;geneIDs=comp112446_c0_seq1.path1;transcripts=comp112446_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19182945	19183135	.	+	.	ID=comp112446_c0_seq1.mrna1;geneID=comp112446_c0_seq1.path1;Name=comp112446_c0_seq1;Dir=indeterminatecoverage=77.0;identity=93.6;matches=189;mismatches=1;indels=12;unknowns=0;Target=comp112446_c0_seq1 248 48 .;CDS_Target=comp112446_c0_seq1 68 48 .;locus=RLOC_00006281
Chr1	stalkie_big_nohaplotig	exon	19182945	19183135	93	+	.	Parent=comp112446_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19182945	19182966	.	+	0	Parent=comp112446_c0_seq1.mrna1
Chr1	gffcl	locus	19183562	19184211	.	-	.	ID=RLOC_00006282;geneIDs=comp151971_c0_seq1.path1;transcripts=comp151971_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19183562	19184211	.	-	.	ID=comp151971_c0_seq1.mrna1;geneID=comp151971_c0_seq1.path1;Name=comp151971_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.6;matches=607;mismatches=10;indels=53;unknowns=0;Target=comp151971_c0_seq1 637 1 .;CDS_Target=comp151971_c0_seq1 153 1 .;locus=RLOC_00006282
Chr1	stalkie_big_nohaplotig	exon	19183562	19184211	90	-	.	Parent=comp151971_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19184059	19184211	.	-	0	Parent=comp151971_c0_seq1.mrna1
Chr1	gffcl	locus	19217958	19218391	.	-	.	ID=RLOC_00006284;geneIDs=comp135111_c0_seq1.path1;transcripts=comp135111_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19217958	19218391	.	-	.	ID=comp135111_c0_seq1.mrna1;geneID=comp135111_c0_seq1.path1;Name=comp135111_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=434;mismatches=0;indels=0;unknowns=0;Target=comp135111_c0_seq1 434 1 .;CDS_Target=comp135111_c0_seq1 151 107 .;locus=RLOC_00006284
Chr1	stalkie_big_nohaplotig	exon	19217958	19218391	100	-	.	Parent=comp135111_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19218241	19218285	.	-	0	Parent=comp135111_c0_seq1.mrna1
Chr1	gffcl	locus	19218802	19219128	.	+	.	ID=RLOC_00006285;geneIDs=comp144689_c0_seq1.path1;transcripts=comp144689_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19218802	19219128	.	+	.	ID=comp144689_c0_seq1.mrna1;geneID=comp144689_c0_seq1.path1;Name=comp144689_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=327;mismatches=0;indels=0;unknowns=0;Target=comp144689_c0_seq1 327 1 .;CDS_Target=comp144689_c0_seq1 125 66 .;locus=RLOC_00006285
Chr1	stalkie_big_nohaplotig	exon	19218802	19219128	100	+	.	Parent=comp144689_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19218867	19218926	.	+	0	Parent=comp144689_c0_seq1.mrna1
Chr1	gffcl	locus	19222362	19222706	.	+	.	ID=RLOC_00006286;geneIDs=comp143061_c0_seq1.path1;transcripts=comp143061_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19222362	19222706	.	+	.	ID=comp143061_c0_seq1.mrna1;geneID=comp143061_c0_seq1.path1;Name=comp143061_c0_seq1;Dir=indeterminatecoverage=78.8;identity=99.1;matches=342;mismatches=3;indels=0;unknowns=0;Target=comp143061_c0_seq1 425 81 .;CDS_Target=comp143061_c0_seq1 148 83 .;locus=RLOC_00006286
Chr1	stalkie_big_nohaplotig	exon	19222362	19222706	99	+	.	Parent=comp143061_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19222364	19222429	.	+	0	Parent=comp143061_c0_seq1.mrna1
Chr1	gffcl	locus	19223216	19225665	.	-	.	ID=RLOC_00006287;geneIDs=FBgn0036104.1.path1;transcripts=FBgn0036104.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19223216	19225665	.	-	.	ID=FBgn0036104.1.mrna1;geneID=FBgn0036104.1.path1;Name=FBgn0036104.1;Dir=sensecoverage=100.0;identity=99.4;matches=2383;mismatches=14;indels=0;unknowns=0;locus=RLOC_00006287
Chr1	stalkie_big_nohaplotig	exon	19223216	19224277	99	-	.	Parent=FBgn0036104.1.mrna1;Target=FBgn0036104.1 1336 2397 +
Chr1	stalkie_big_nohaplotig	exon	19224331	19225665	99	-	.	Parent=FBgn0036104.1.mrna1;Target=FBgn0036104.1 1 1335 +
Chr1	stalkie_big_nohaplotig	CDS	19223216	19224277	.	-	0	Parent=FBgn0036104.1.mrna1;Target=FBgn0036104.1 1336 2397 +
Chr1	stalkie_big_nohaplotig	CDS	19224331	19225665	.	-	0	Parent=FBgn0036104.1.mrna1;Target=FBgn0036104.1 1 1335 +
Chr1	gffcl	locus	19227039	19227720	.	+	.	ID=RLOC_00006288;geneIDs=FBgn0036105.1.path1;transcripts=FBgn0036105.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19227039	19227720	.	+	.	ID=FBgn0036105.1.mrna1;geneID=FBgn0036105.1.path1;Name=FBgn0036105.1;Dir=sensecoverage=99.5;identity=99.5;matches=549;mismatches=3;indels=0;unknowns=0;locus=RLOC_00006288
Chr1	stalkie_big_nohaplotig	exon	19227039	19227110	100	+	.	Parent=FBgn0036105.1.mrna1;Target=FBgn0036105.1 4 75 +
Chr1	stalkie_big_nohaplotig	exon	19227179	19227250	100	+	.	Parent=FBgn0036105.1.mrna1;Target=FBgn0036105.1 76 147 +
Chr1	stalkie_big_nohaplotig	exon	19227313	19227720	99	+	.	Parent=FBgn0036105.1.mrna1;Target=FBgn0036105.1 148 555 +
Chr1	stalkie_big_nohaplotig	CDS	19227039	19227110	.	+	0	Parent=FBgn0036105.1.mrna1;Target=FBgn0036105.1 4 75 +
Chr1	stalkie_big_nohaplotig	CDS	19227179	19227250	.	+	0	Parent=FBgn0036105.1.mrna1;Target=FBgn0036105.1 76 147 +
Chr1	stalkie_big_nohaplotig	CDS	19227313	19227720	.	+	0	Parent=FBgn0036105.1.mrna1;Target=FBgn0036105.1 148 555 +
Chr1	gffcl	locus	19228143	19228463	.	-	.	ID=RLOC_00006289;geneIDs=comp137686_c0_seq1.path1;transcripts=comp137686_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19228143	19228463	.	-	.	ID=comp137686_c0_seq1.mrna1;geneID=comp137686_c0_seq1.path1;Name=comp137686_c0_seq1;Dir=indeterminatecoverage=94.4;identity=99.4;matches=319;mismatches=0;indels=2;unknowns=0;Target=comp137686_c0_seq1 319 1 .;CDS_Target=comp137686_c0_seq1 75 1 .;locus=RLOC_00006289
Chr1	stalkie_big_nohaplotig	exon	19228143	19228463	99	-	.	Parent=comp137686_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19228389	19228463	.	-	0	Parent=comp137686_c0_seq1.mrna1
Chr1	gffcl	locus	19235184	19235911	.	+	.	ID=RLOC_00006290;geneIDs=FBgn0036745.1.path1;transcripts=FBgn0036745.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19235184	19235911	.	+	.	ID=FBgn0036745.1.mrna1;geneID=FBgn0036745.1.path1;Name=FBgn0036745.1;Dir=sensecoverage=100.0;identity=100.0;matches=621;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006290
Chr1	stalkie_big_nohaplotig	exon	19235184	19235309	100	+	.	Parent=FBgn0036745.1.mrna1;Target=FBgn0036745.1 1 126 +
Chr1	stalkie_big_nohaplotig	exon	19235360	19235475	100	+	.	Parent=FBgn0036745.1.mrna1;Target=FBgn0036745.1 127 242 +
Chr1	stalkie_big_nohaplotig	exon	19235533	19235911	100	+	.	Parent=FBgn0036745.1.mrna1;Target=FBgn0036745.1 243 621 +
Chr1	stalkie_big_nohaplotig	CDS	19235184	19235309	.	+	0	Parent=FBgn0036745.1.mrna1;Target=FBgn0036745.1 1 126 +
Chr1	stalkie_big_nohaplotig	CDS	19235360	19235475	.	+	0	Parent=FBgn0036745.1.mrna1;Target=FBgn0036745.1 127 242 +
Chr1	stalkie_big_nohaplotig	CDS	19235533	19235911	.	+	1	Parent=FBgn0036745.1.mrna1;Target=FBgn0036745.1 243 621 +
Chr1	gffcl	locus	19244965	19245442	.	-	.	ID=RLOC_00006291;geneIDs=comp150988_c0_seq1.path1;transcripts=comp150988_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19244965	19245442	.	-	.	ID=comp150988_c0_seq1.mrna1;geneID=comp150988_c0_seq1.path1;Name=comp150988_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=477;mismatches=1;indels=0;unknowns=0;Target=comp150988_c0_seq1 478 1 .;CDS_Target=comp150988_c0_seq1 462 127 .;locus=RLOC_00006291
Chr1	stalkie_big_nohaplotig	exon	19244965	19245442	99	-	.	Parent=comp150988_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19244981	19245316	.	-	0	Parent=comp150988_c0_seq1.mrna1
Chr1	gffcl	locus	19259213	19259782	.	-	.	ID=RLOC_00006292;geneIDs=comp148319_c0_seq1.path1;transcripts=comp148319_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19259213	19259782	.	-	.	ID=comp148319_c0_seq1.mrna1;geneID=comp148319_c0_seq1.path1;Name=comp148319_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=567;mismatches=3;indels=0;unknowns=0;Target=comp148319_c0_seq1 570 1 .;CDS_Target=comp148319_c0_seq1 530 399 .;locus=RLOC_00006292
Chr1	stalkie_big_nohaplotig	exon	19259213	19259782	99	-	.	Parent=comp148319_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19259253	19259384	.	-	0	Parent=comp148319_c0_seq1.mrna1
Chr1	gffcl	locus	19259903	19260161	.	+	.	ID=RLOC_00006293;geneIDs=comp93703_c0_seq1.path1;transcripts=comp93703_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19259903	19260161	.	+	.	ID=comp93703_c0_seq1.mrna1;geneID=comp93703_c0_seq1.path1;Name=comp93703_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=259;mismatches=0;indels=0;unknowns=0;Target=comp93703_c0_seq1 259 1 .;CDS_Target=comp93703_c0_seq1 232 125 .;locus=RLOC_00006293
Chr1	stalkie_big_nohaplotig	exon	19259903	19260161	100	+	.	Parent=comp93703_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19260027	19260134	.	+	0	Parent=comp93703_c0_seq1.mrna1
Chr1	gffcl	locus	19260450	19261168	.	+	.	ID=RLOC_00006294;geneIDs=comp149497_c0_seq1.path1;transcripts=comp149497_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19260450	19261168	.	+	.	ID=comp149497_c0_seq1.mrna1;geneID=comp149497_c0_seq1.path1;Name=comp149497_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.9;matches=718;mismatches=0;indels=1;unknowns=0;Target=comp149497_c0_seq1 720 3 .;CDS_Target=comp149497_c0_seq1 22 5 .;locus=RLOC_00006294
Chr1	stalkie_big_nohaplotig	exon	19260450	19261168	99	+	.	Parent=comp149497_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19260452	19260470	.	+	0	Parent=comp149497_c0_seq1.mrna1
Chr1	gffcl	locus	19261621	19262050	.	-	.	ID=RLOC_00006295;geneIDs=comp146827_c0_seq1.path2;transcripts=comp146827_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	19261621	19262050	.	-	.	ID=comp146827_c0_seq1.mrna2;geneID=comp146827_c0_seq1.path2;Name=comp146827_c0_seq1;Dir=indeterminatecoverage=86.0;identity=99.8;matches=429;mismatches=1;indels=0;unknowns=0;Target=comp146827_c0_seq1 500 71 .;CDS_Target=comp146827_c0_seq1 89 71 .;locus=RLOC_00006295
Chr1	stalkie_big_nohaplotig	exon	19261621	19262050	99	-	.	Parent=comp146827_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	19262032	19262050	.	-	2	Parent=comp146827_c0_seq1.mrna2
Chr1	gffcl	locus	19263329	19265257	.	-	.	ID=RLOC_00006296;geneIDs=FBgn0036746.1.path1;transcripts=FBgn0036746.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19263329	19265257	.	-	.	ID=FBgn0036746.1.mrna1;geneID=FBgn0036746.1.path1;Name=FBgn0036746.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1926;mismatches=3;indels=0;unknowns=0;Target=FBgn0036746.1 1929 1 .;locus=RLOC_00006296
Chr1	stalkie_big_nohaplotig	exon	19263329	19265257	99	-	.	Parent=FBgn0036746.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19263329	19265257	.	-	0	Parent=FBgn0036746.1.mrna1
Chr1	gffcl	locus	19330218	19330744	.	-	.	ID=RLOC_00006297;geneIDs=comp151741_c0_seq1.path1;transcripts=comp151741_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19330218	19330744	.	-	.	ID=comp151741_c0_seq1.mrna1;geneID=comp151741_c0_seq1.path1;Name=comp151741_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=521;mismatches=5;indels=1;unknowns=0;Target=comp151741_c0_seq1 526 1 .;CDS_Target=comp151741_c0_seq1 448 113 .;locus=RLOC_00006297
Chr1	stalkie_big_nohaplotig	exon	19330218	19330744	98	-	.	Parent=comp151741_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19330296	19330631	.	-	0	Parent=comp151741_c0_seq1.mrna1
Chr1	gffcl	locus	19399452	19399699	.	+	.	ID=RLOC_00006299;geneIDs=comp84130_c0_seq1.path1;transcripts=comp84130_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19399452	19399699	.	+	.	ID=comp84130_c0_seq1.mrna1;geneID=comp84130_c0_seq1.path1;Name=comp84130_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=248;mismatches=0;indels=0;unknowns=0;Target=comp84130_c0_seq1 248 1 .;CDS_Target=comp84130_c0_seq1 201 85 .;locus=RLOC_00006299
Chr1	stalkie_big_nohaplotig	exon	19399452	19399699	100	+	.	Parent=comp84130_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19399536	19399652	.	+	0	Parent=comp84130_c0_seq1.mrna1
Chr1	gffcl	locus	19482578	19482806	.	-	.	ID=RLOC_00006300;geneIDs=comp145731_c0_seq1.path1;transcripts=comp145731_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19482578	19482806	.	-	.	ID=comp145731_c0_seq1.mrna1;geneID=comp145731_c0_seq1.path1;Name=comp145731_c0_seq1;Dir=indeterminatecoverage=83.6;identity=99.1;matches=227;mismatches=2;indels=0;unknowns=0;Target=comp145731_c0_seq1 229 1 .;CDS_Target=comp145731_c0_seq1 142 2 .;locus=RLOC_00006300
Chr1	stalkie_big_nohaplotig	exon	19482578	19482806	99	-	.	Parent=comp145731_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19482665	19482805	.	-	0	Parent=comp145731_c0_seq1.mrna1
Chr1	gffcl	locus	19597196	19601562	.	-	.	ID=RLOC_00006301;geneIDs=comp162286_c1_seq1.path1;transcripts=comp162286_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19597196	19601562	.	-	.	ID=comp162286_c1_seq1.mrna1;geneID=comp162286_c1_seq1.path1;Name=comp162286_c1_seq1;Dir=sensecoverage=99.9;identity=96.1;matches=1221;mismatches=31;indels=18;unknowns=0;locus=RLOC_00006301
Chr1	stalkie_big_nohaplotig	exon	19597196	19597814	94	-	.	Parent=comp162286_c1_seq1.mrna1;Target=comp162286_c1_seq1 641 1259 +
Chr1	stalkie_big_nohaplotig	exon	19597872	19598060	99	-	.	Parent=comp162286_c1_seq1.mrna1;Target=comp162286_c1_seq1 452 640 +
Chr1	stalkie_big_nohaplotig	exon	19598112	19598139	100	-	.	Parent=comp162286_c1_seq1.mrna1;Target=comp162286_c1_seq1 424 451 +
Chr1	stalkie_big_nohaplotig	exon	19598225	19598253	100	-	.	Parent=comp162286_c1_seq1.mrna1;Target=comp162286_c1_seq1 395 423 +
Chr1	stalkie_big_nohaplotig	exon	19598347	19598438	98	-	.	Parent=comp162286_c1_seq1.mrna1;Target=comp162286_c1_seq1 303 394 +
Chr1	stalkie_big_nohaplotig	exon	19600001	19600065	100	-	.	Parent=comp162286_c1_seq1.mrna1;Target=comp162286_c1_seq1 238 302 +
Chr1	stalkie_big_nohaplotig	exon	19600459	19600520	87	-	.	Parent=comp162286_c1_seq1.mrna1;Target=comp162286_c1_seq1 180 237 +
Chr1	stalkie_big_nohaplotig	exon	19601287	19601344	98	-	.	Parent=comp162286_c1_seq1.mrna1;Target=comp162286_c1_seq1 122 179 +
Chr1	stalkie_big_nohaplotig	exon	19601442	19601562	98	-	.	Parent=comp162286_c1_seq1.mrna1;Target=comp162286_c1_seq1 1 121 +
Chr1	stalkie_big_nohaplotig	CDS	19597629	19597814	.	-	0	Parent=comp162286_c1_seq1.mrna1;Target=comp162286_c1_seq1 641 826 +
Chr1	stalkie_big_nohaplotig	CDS	19597872	19598060	.	-	0	Parent=comp162286_c1_seq1.mrna1;Target=comp162286_c1_seq1 452 640 +
Chr1	stalkie_big_nohaplotig	CDS	19598112	19598139	.	-	1	Parent=comp162286_c1_seq1.mrna1;Target=comp162286_c1_seq1 424 451 +
Chr1	stalkie_big_nohaplotig	CDS	19598225	19598238	.	-	0	Parent=comp162286_c1_seq1.mrna1;Target=comp162286_c1_seq1 410 423 +
Chr1	gffcl	locus	19604569	19893914	.	.	.	ID=RLOC_00006302;geneIDs=comp86052_c0_seq1.path1,comp144874_c0_seq1.path1,comp149470_c0_seq1.path1,comp156797_c0_seq1.path1;transcripts=comp156797_c0_seq1.mrna1,comp86052_c0_seq1.mrna1,comp149470_c0_seq1.mrna1,comp144874_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19604569	19893914	.	-	.	ID=comp156797_c0_seq1.mrna1;geneID=comp156797_c0_seq1.path1;Name=comp156797_c0_seq1;Dir=indeterminatecoverage=92.4;identity=91.9;matches=2414;mismatches=82;indels=132;unknowns=0;Target=comp156797_c0_seq1 1905 1792 .;locus=RLOC_00006302
Chr1	stalkie_big_nohaplotig	exon	19604569	19606465	98	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 3609 1705 .
Chr1	stalkie_big_nohaplotig	exon	19608625	19608633	88	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 1704 1696 .
Chr1	stalkie_big_nohaplotig	exon	19608757	19608761	80	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 1695 1691 .
Chr1	stalkie_big_nohaplotig	exon	19608917	19608934	45	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 1690 1651 .
Chr1	stalkie_big_nohaplotig	exon	19612018	19612025	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 1650 1643 .
Chr1	stalkie_big_nohaplotig	exon	19612032	19612039	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 1200 1193 .
Chr1	stalkie_big_nohaplotig	exon	19612043	19612048	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 1151 1146 .
Chr1	stalkie_big_nohaplotig	exon	19614734	19614743	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 1093 1084 .
Chr1	stalkie_big_nohaplotig	exon	19618970	19618972	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 1083 1081 .
Chr1	stalkie_big_nohaplotig	exon	19622390	19622395	83	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 1080 1075 .
Chr1	stalkie_big_nohaplotig	exon	19627295	19627302	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 1074 1067 .
Chr1	stalkie_big_nohaplotig	exon	19627969	19627972	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 1066 1063 .
Chr1	stalkie_big_nohaplotig	exon	19628069	19628078	80	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 1062 1053 .
Chr1	stalkie_big_nohaplotig	exon	19640735	19640737	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 1052 1050 .
Chr1	stalkie_big_nohaplotig	exon	19642639	19642643	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 1049 1045 .
Chr1	stalkie_big_nohaplotig	exon	19644470	19644512	47	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 1044 977 .
Chr1	stalkie_big_nohaplotig	exon	19649590	19649614	56	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 976 941 .
Chr1	stalkie_big_nohaplotig	exon	19653340	19653350	81	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 940 930 .
Chr1	stalkie_big_nohaplotig	exon	19661086	19661091	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 929 924 .
Chr1	stalkie_big_nohaplotig	exon	19663170	19663173	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 923 920 .
Chr1	stalkie_big_nohaplotig	exon	19681650	19681658	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 914 906 .
Chr1	stalkie_big_nohaplotig	exon	19683512	19683518	85	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 886 880 .
Chr1	stalkie_big_nohaplotig	exon	19692936	19692943	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 879 872 .
Chr1	stalkie_big_nohaplotig	exon	19694640	19694647	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 871 864 .
Chr1	stalkie_big_nohaplotig	exon	19698350	19698354	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 863 859 .
Chr1	stalkie_big_nohaplotig	exon	19722081	19722095	86	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 858 844 .
Chr1	stalkie_big_nohaplotig	exon	19726496	19726505	80	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 843 834 .
Chr1	stalkie_big_nohaplotig	exon	19728244	19728256	69	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 833 821 .
Chr1	stalkie_big_nohaplotig	exon	19730567	19730577	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 820 810 .
Chr1	stalkie_big_nohaplotig	exon	19733221	19733266	67	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 809 773 .
Chr1	stalkie_big_nohaplotig	exon	19738832	19738839	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 772 765 .
Chr1	stalkie_big_nohaplotig	exon	19739539	19739587	28	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 764 751 .
Chr1	stalkie_big_nohaplotig	exon	19739936	19739941	83	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 750 745 .
Chr1	stalkie_big_nohaplotig	exon	19747642	19747655	85	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 744 731 .
Chr1	stalkie_big_nohaplotig	exon	19756416	19756423	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 730 723 .
Chr1	stalkie_big_nohaplotig	exon	19773185	19773242	51	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 722 647 .
Chr1	stalkie_big_nohaplotig	exon	19783058	19783064	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 601 595 .
Chr1	stalkie_big_nohaplotig	exon	19806481	19806501	80	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 594 574 .
Chr1	stalkie_big_nohaplotig	exon	19812571	19812579	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 573 565 .
Chr1	stalkie_big_nohaplotig	exon	19817337	19817348	83	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 564 553 .
Chr1	stalkie_big_nohaplotig	exon	19826836	19826837	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 552 551 .
Chr1	stalkie_big_nohaplotig	exon	19829751	19829761	90	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 550 540 .
Chr1	stalkie_big_nohaplotig	exon	19832024	19832026	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 539 537 .
Chr1	stalkie_big_nohaplotig	exon	19834446	19834454	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 521 513 .
Chr1	stalkie_big_nohaplotig	exon	19838927	19838935	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 482 474 .
Chr1	stalkie_big_nohaplotig	exon	19852998	19853006	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 404 396 .
Chr1	stalkie_big_nohaplotig	exon	19854482	19854491	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 395 386 .
Chr1	stalkie_big_nohaplotig	exon	19854498	19854505	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 348 341 .
Chr1	stalkie_big_nohaplotig	exon	19860912	19860914	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 340 338 .
Chr1	stalkie_big_nohaplotig	exon	19865163	19865170	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 333 326 .
Chr1	stalkie_big_nohaplotig	exon	19867062	19867073	83	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 325 314 .
Chr1	stalkie_big_nohaplotig	exon	19868360	19868372	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 313 301 .
Chr1	stalkie_big_nohaplotig	exon	19888508	19888514	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 300 294 .
Chr1	stalkie_big_nohaplotig	exon	19891985	19891986	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 293 292 .
Chr1	stalkie_big_nohaplotig	exon	19893897	19893914	100	-	.	Parent=comp156797_c0_seq1.mrna1;Target=comp156797_c0_seq1 291 274 .
Chr1	stalkie_big_nohaplotig	CDS	19606265	19606378	.	-	0	Parent=comp156797_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19733142	19734139	.	+	.	ID=comp86052_c0_seq1.mrna1;geneID=comp86052_c0_seq1.path1;Name=comp86052_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.2;matches=980;mismatches=1;indels=17;unknowns=0;Target=comp86052_c0_seq1 984 4 .;CDS_Target=comp86052_c0_seq1 904 728 .;locus=RLOC_00006302
Chr1	stalkie_big_nohaplotig	exon	19733142	19734139	98	+	.	Parent=comp86052_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19733883	19734059	.	+	0	Parent=comp86052_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19738282	19738912	.	-	.	ID=comp149470_c0_seq1.mrna1;geneID=comp149470_c0_seq1.path1;Name=comp149470_c0_seq1;Dir=indeterminatecoverage=99.7;identity=96.1;matches=611;mismatches=19;indels=6;unknowns=0;Target=comp149470_c0_seq1 635 1 .;CDS_Target=comp149470_c0_seq1 447 406 .;locus=RLOC_00006302
Chr1	stalkie_big_nohaplotig	exon	19738282	19738912	96	-	.	Parent=comp149470_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19738470	19738512	.	-	0	Parent=comp149470_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19739409	19740036	.	-	.	ID=comp144874_c0_seq1.mrna1;geneID=comp144874_c0_seq1.path1;Name=comp144874_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.3;matches=600;mismatches=26;indels=17;unknowns=0;Target=comp144874_c0_seq1 641 1 .;CDS_Target=comp144874_c0_seq1 263 171 .;locus=RLOC_00006302
Chr1	stalkie_big_nohaplotig	exon	19739409	19740036	93	-	.	Parent=comp144874_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19739789	19739881	.	-	0	Parent=comp144874_c0_seq1.mrna1
Chr1	gffcl	locus	19606663	19614452	.	-	.	ID=RLOC_00006303;geneIDs=FBgn0035236.1.path1;transcripts=FBgn0035236.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19606663	19614452	.	-	.	ID=FBgn0035236.1.mrna1;geneID=FBgn0035236.1.path1;Name=FBgn0035236.1;Dir=sensecoverage=99.4;identity=99.6;matches=1372;mismatches=5;indels=0;unknowns=0;locus=RLOC_00006303
Chr1	stalkie_big_nohaplotig	exon	19606663	19606904	99	-	.	Parent=FBgn0035236.1.mrna1;Target=FBgn0035236.1 1145 1386 +
Chr1	stalkie_big_nohaplotig	exon	19609514	19609598	100	-	.	Parent=FBgn0035236.1.mrna1;Target=FBgn0035236.1 1060 1144 +
Chr1	stalkie_big_nohaplotig	exon	19609657	19609731	100	-	.	Parent=FBgn0035236.1.mrna1;Target=FBgn0035236.1 985 1059 +
Chr1	stalkie_big_nohaplotig	exon	19611272	19611438	100	-	.	Parent=FBgn0035236.1.mrna1;Target=FBgn0035236.1 818 984 +
Chr1	stalkie_big_nohaplotig	exon	19611517	19611686	100	-	.	Parent=FBgn0035236.1.mrna1;Target=FBgn0035236.1 648 817 +
Chr1	stalkie_big_nohaplotig	exon	19611758	19612016	98	-	.	Parent=FBgn0035236.1.mrna1;Target=FBgn0035236.1 389 647 +
Chr1	stalkie_big_nohaplotig	exon	19614007	19614172	100	-	.	Parent=FBgn0035236.1.mrna1;Target=FBgn0035236.1 223 388 +
Chr1	stalkie_big_nohaplotig	exon	19614240	19614452	100	-	.	Parent=FBgn0035236.1.mrna1;Target=FBgn0035236.1 10 222 +
Chr1	stalkie_big_nohaplotig	CDS	19606663	19606904	.	-	2	Parent=FBgn0035236.1.mrna1;Target=FBgn0035236.1 1145 1386 +
Chr1	stalkie_big_nohaplotig	CDS	19609514	19609598	.	-	0	Parent=FBgn0035236.1.mrna1;Target=FBgn0035236.1 1060 1144 +
Chr1	stalkie_big_nohaplotig	CDS	19609657	19609731	.	-	0	Parent=FBgn0035236.1.mrna1;Target=FBgn0035236.1 985 1059 +
Chr1	stalkie_big_nohaplotig	CDS	19611272	19611438	.	-	2	Parent=FBgn0035236.1.mrna1;Target=FBgn0035236.1 818 984 +
Chr1	stalkie_big_nohaplotig	CDS	19611517	19611686	.	-	1	Parent=FBgn0035236.1.mrna1;Target=FBgn0035236.1 648 817 +
Chr1	stalkie_big_nohaplotig	CDS	19611758	19612016	.	-	2	Parent=FBgn0035236.1.mrna1;Target=FBgn0035236.1 389 647 +
Chr1	stalkie_big_nohaplotig	CDS	19614007	19614172	.	-	0	Parent=FBgn0035236.1.mrna1;Target=FBgn0035236.1 223 388 +
Chr1	stalkie_big_nohaplotig	CDS	19614240	19614452	.	-	0	Parent=FBgn0035236.1.mrna1;Target=FBgn0035236.1 10 222 +
Chr1	gffcl	locus	19659387	19660361	.	-	.	ID=RLOC_00006304;geneIDs=FBgn0035233.1.path1;transcripts=FBgn0035233.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19659387	19660361	.	-	.	ID=FBgn0035233.1.mrna1;geneID=FBgn0035233.1.path1;Name=FBgn0035233.1;Dir=sensecoverage=100.0;identity=99.2;matches=905;mismatches=7;indels=0;unknowns=0;locus=RLOC_00006304
Chr1	stalkie_big_nohaplotig	exon	19659387	19660010	99	-	.	Parent=FBgn0035233.1.mrna1;Target=FBgn0035233.1 289 912 +
Chr1	stalkie_big_nohaplotig	exon	19660074	19660361	99	-	.	Parent=FBgn0035233.1.mrna1;Target=FBgn0035233.1 1 288 +
Chr1	stalkie_big_nohaplotig	CDS	19659387	19660010	.	-	0	Parent=FBgn0035233.1.mrna1;Target=FBgn0035233.1 289 912 +
Chr1	stalkie_big_nohaplotig	CDS	19660074	19660361	.	-	0	Parent=FBgn0035233.1.mrna1;Target=FBgn0035233.1 1 288 +
Chr1	gffcl	locus	19662731	19665209	.	+	.	ID=RLOC_00006305;geneIDs=FBgn0035232.1.path1;transcripts=FBgn0035232.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19662731	19665209	.	+	.	ID=FBgn0035232.1.mrna1;geneID=FBgn0035232.1.path1;Name=FBgn0035232.1;Dir=sensecoverage=100.0;identity=99.6;matches=2238;mismatches=9;indels=0;unknowns=0;locus=RLOC_00006305
Chr1	stalkie_big_nohaplotig	exon	19662731	19662833	100	+	.	Parent=FBgn0035232.1.mrna1;Target=FBgn0035232.1 1 103 +
Chr1	stalkie_big_nohaplotig	exon	19662886	19663378	99	+	.	Parent=FBgn0035232.1.mrna1;Target=FBgn0035232.1 104 596 +
Chr1	stalkie_big_nohaplotig	exon	19663438	19664570	99	+	.	Parent=FBgn0035232.1.mrna1;Target=FBgn0035232.1 597 1729 +
Chr1	stalkie_big_nohaplotig	exon	19664631	19664785	99	+	.	Parent=FBgn0035232.1.mrna1;Target=FBgn0035232.1 1730 1884 +
Chr1	stalkie_big_nohaplotig	exon	19664847	19665209	99	+	.	Parent=FBgn0035232.1.mrna1;Target=FBgn0035232.1 1885 2247 +
Chr1	stalkie_big_nohaplotig	CDS	19662731	19662833	.	+	0	Parent=FBgn0035232.1.mrna1;Target=FBgn0035232.1 1 103 +
Chr1	stalkie_big_nohaplotig	CDS	19662886	19663378	.	+	2	Parent=FBgn0035232.1.mrna1;Target=FBgn0035232.1 104 596 +
Chr1	stalkie_big_nohaplotig	CDS	19663438	19664570	.	+	1	Parent=FBgn0035232.1.mrna1;Target=FBgn0035232.1 597 1729 +
Chr1	stalkie_big_nohaplotig	CDS	19664631	19664785	.	+	2	Parent=FBgn0035232.1.mrna1;Target=FBgn0035232.1 1730 1884 +
Chr1	stalkie_big_nohaplotig	CDS	19664847	19665209	.	+	0	Parent=FBgn0035232.1.mrna1;Target=FBgn0035232.1 1885 2247 +
Chr1	gffcl	locus	19668945	19670082	.	-	.	ID=RLOC_00006306;geneIDs=comp155690_c0_seq1.path1;transcripts=comp155690_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19668945	19670082	.	-	.	ID=comp155690_c0_seq1.mrna1;geneID=comp155690_c0_seq1.path1;Name=comp155690_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.1;matches=1136;mismatches=2;indels=8;unknowns=0;Target=comp155690_c0_seq1 1160 15 .;CDS_Target=comp155690_c0_seq1 140 15 .;locus=RLOC_00006306
Chr1	stalkie_big_nohaplotig	exon	19668945	19670082	99	-	.	Parent=comp155690_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19669957	19670082	.	-	0	Parent=comp155690_c0_seq1.mrna1
Chr1	gffcl	locus	19670274	19684137	.	-	.	ID=RLOC_00006307;geneIDs=FBgn0041342.1.path1,comp149396_c0_seq1.path1;transcripts=FBgn0041342.1.mrna1,comp149396_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19670274	19684137	.	-	.	ID=FBgn0041342.1.mrna1;geneID=FBgn0041342.1.path1;Name=FBgn0041342.1;Dir=sensecoverage=100.0;identity=99.7;matches=1556;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006307
Chr1	stalkie_big_nohaplotig	exon	19670274	19670845	99	-	.	Parent=FBgn0041342.1.mrna1;Target=FBgn0041342.1 989 1560 +
Chr1	stalkie_big_nohaplotig	exon	19671506	19671668	100	-	.	Parent=FBgn0041342.1.mrna1;Target=FBgn0041342.1 826 988 +
Chr1	stalkie_big_nohaplotig	exon	19671727	19671864	99	-	.	Parent=FBgn0041342.1.mrna1;Target=FBgn0041342.1 688 825 +
Chr1	stalkie_big_nohaplotig	exon	19671945	19672130	99	-	.	Parent=FBgn0041342.1.mrna1;Target=FBgn0041342.1 502 687 +
Chr1	stalkie_big_nohaplotig	exon	19683637	19684137	100	-	.	Parent=FBgn0041342.1.mrna1;Target=FBgn0041342.1 1 501 +
Chr1	stalkie_big_nohaplotig	CDS	19670274	19670845	.	-	2	Parent=FBgn0041342.1.mrna1;Target=FBgn0041342.1 989 1560 +
Chr1	stalkie_big_nohaplotig	CDS	19671506	19671668	.	-	0	Parent=FBgn0041342.1.mrna1;Target=FBgn0041342.1 826 988 +
Chr1	stalkie_big_nohaplotig	CDS	19671727	19671864	.	-	0	Parent=FBgn0041342.1.mrna1;Target=FBgn0041342.1 688 825 +
Chr1	stalkie_big_nohaplotig	CDS	19671945	19672130	.	-	0	Parent=FBgn0041342.1.mrna1;Target=FBgn0041342.1 502 687 +
Chr1	stalkie_big_nohaplotig	CDS	19683637	19684137	.	-	0	Parent=FBgn0041342.1.mrna1;Target=FBgn0041342.1 1 501 +
Chr1	stalkie_big_nohaplotig	mRNA	19671092	19671525	.	-	.	ID=comp149396_c0_seq1.mrna1;geneID=comp149396_c0_seq1.path1;Name=comp149396_c0_seq1;Dir=sensecoverage=100.0;identity=95.6;matches=368;mismatches=16;indels=1;unknowns=0;Target=comp149396_c0_seq1 104 169 +;locus=RLOC_00006307
Chr1	stalkie_big_nohaplotig	exon	19671092	19671376	95	-	.	Parent=comp149396_c0_seq1.mrna1;Target=comp149396_c0_seq1 100 385 +
Chr1	stalkie_big_nohaplotig	exon	19671427	19671525	94	-	.	Parent=comp149396_c0_seq1.mrna1;Target=comp149396_c0_seq1 1 99 +
Chr1	stalkie_big_nohaplotig	CDS	19671307	19671372	.	-	0	Parent=comp149396_c0_seq1.mrna1
Chr1	gffcl	locus	19692859	19694830	.	+	.	ID=RLOC_00006308;geneIDs=FBgn0261111.1.path1;transcripts=FBgn0261111.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19692859	19694830	.	+	.	ID=FBgn0261111.1.mrna1;geneID=FBgn0261111.1.path1;Name=FBgn0261111.1;Dir=sensecoverage=100.0;identity=99.9;matches=1384;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006308
Chr1	stalkie_big_nohaplotig	exon	19692859	19693227	100	+	.	Parent=FBgn0261111.1.mrna1;Target=FBgn0261111.1 1 369 +
Chr1	stalkie_big_nohaplotig	exon	19693292	19693825	99	+	.	Parent=FBgn0261111.1.mrna1;Target=FBgn0261111.1 370 903 +
Chr1	stalkie_big_nohaplotig	exon	19693891	19694152	100	+	.	Parent=FBgn0261111.1.mrna1;Target=FBgn0261111.1 904 1165 +
Chr1	stalkie_big_nohaplotig	exon	19694545	19694647	99	+	.	Parent=FBgn0261111.1.mrna1;Target=FBgn0261111.1 1166 1268 +
Chr1	stalkie_big_nohaplotig	exon	19694713	19694830	100	+	.	Parent=FBgn0261111.1.mrna1;Target=FBgn0261111.1 1269 1386 +
Chr1	stalkie_big_nohaplotig	CDS	19692859	19693227	.	+	0	Parent=FBgn0261111.1.mrna1;Target=FBgn0261111.1 1 369 +
Chr1	stalkie_big_nohaplotig	CDS	19693292	19693825	.	+	0	Parent=FBgn0261111.1.mrna1;Target=FBgn0261111.1 370 903 +
Chr1	stalkie_big_nohaplotig	CDS	19693891	19694152	.	+	0	Parent=FBgn0261111.1.mrna1;Target=FBgn0261111.1 904 1165 +
Chr1	stalkie_big_nohaplotig	CDS	19694545	19694647	.	+	2	Parent=FBgn0261111.1.mrna1;Target=FBgn0261111.1 1166 1268 +
Chr1	stalkie_big_nohaplotig	CDS	19694713	19694830	.	+	1	Parent=FBgn0261111.1.mrna1;Target=FBgn0261111.1 1269 1386 +
Chr1	gffcl	locus	19696354	19697263	.	-	.	ID=RLOC_00006309;geneIDs=FBgn0035753.1.path1;transcripts=FBgn0035753.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19696354	19697263	.	-	.	ID=FBgn0035753.1.mrna1;geneID=FBgn0035753.1.path1;Name=FBgn0035753.1;Dir=sensecoverage=100.0;identity=100.0;matches=627;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006309
Chr1	stalkie_big_nohaplotig	exon	19696354	19696827	100	-	.	Parent=FBgn0035753.1.mrna1;Target=FBgn0035753.1 154 627 +
Chr1	stalkie_big_nohaplotig	exon	19696963	19697049	100	-	.	Parent=FBgn0035753.1.mrna1;Target=FBgn0035753.1 67 153 +
Chr1	stalkie_big_nohaplotig	exon	19697198	19697263	100	-	.	Parent=FBgn0035753.1.mrna1;Target=FBgn0035753.1 1 66 +
Chr1	stalkie_big_nohaplotig	CDS	19696354	19696827	.	-	0	Parent=FBgn0035753.1.mrna1;Target=FBgn0035753.1 154 627 +
Chr1	stalkie_big_nohaplotig	CDS	19696963	19697049	.	-	0	Parent=FBgn0035753.1.mrna1;Target=FBgn0035753.1 67 153 +
Chr1	stalkie_big_nohaplotig	CDS	19697198	19697263	.	-	0	Parent=FBgn0035753.1.mrna1;Target=FBgn0035753.1 1 66 +
Chr1	gffcl	locus	19699918	19700750	.	-	.	ID=RLOC_00006310;geneIDs=FBgn0035965.1.path1;transcripts=FBgn0035965.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19699918	19700750	.	-	.	ID=FBgn0035965.1.mrna1;geneID=FBgn0035965.1.path1;Name=FBgn0035965.1;Dir=sensecoverage=100.0;identity=99.2;matches=708;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006310
Chr1	stalkie_big_nohaplotig	exon	19699918	19700276	99	-	.	Parent=FBgn0035965.1.mrna1;Target=FBgn0035965.1 356 714 +
Chr1	stalkie_big_nohaplotig	exon	19700341	19700534	98	-	.	Parent=FBgn0035965.1.mrna1;Target=FBgn0035965.1 162 355 +
Chr1	stalkie_big_nohaplotig	exon	19700590	19700750	99	-	.	Parent=FBgn0035965.1.mrna1;Target=FBgn0035965.1 1 161 +
Chr1	stalkie_big_nohaplotig	CDS	19699918	19700276	.	-	2	Parent=FBgn0035965.1.mrna1;Target=FBgn0035965.1 356 714 +
Chr1	stalkie_big_nohaplotig	CDS	19700341	19700534	.	-	1	Parent=FBgn0035965.1.mrna1;Target=FBgn0035965.1 162 355 +
Chr1	stalkie_big_nohaplotig	CDS	19700590	19700750	.	-	0	Parent=FBgn0035965.1.mrna1;Target=FBgn0035965.1 1 161 +
Chr1	gffcl	locus	19701644	19707515	.	+	.	ID=RLOC_00006311;geneIDs=FBgn0024921.1.path1;transcripts=FBgn0024921.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19701644	19707515	.	+	.	ID=FBgn0024921.1.mrna1;geneID=FBgn0024921.1.path1;Name=FBgn0024921.1;Dir=sensecoverage=100.0;identity=99.7;matches=2662;mismatches=8;indels=0;unknowns=0;locus=RLOC_00006311
Chr1	stalkie_big_nohaplotig	exon	19701644	19701748	99	+	.	Parent=FBgn0024921.1.mrna1;Target=FBgn0024921.1 1 105 +
Chr1	stalkie_big_nohaplotig	exon	19701904	19702575	100	+	.	Parent=FBgn0024921.1.mrna1;Target=FBgn0024921.1 106 777 +
Chr1	stalkie_big_nohaplotig	exon	19702635	19703732	99	+	.	Parent=FBgn0024921.1.mrna1;Target=FBgn0024921.1 778 1875 +
Chr1	stalkie_big_nohaplotig	exon	19703791	19703961	100	+	.	Parent=FBgn0024921.1.mrna1;Target=FBgn0024921.1 1876 2046 +
Chr1	stalkie_big_nohaplotig	exon	19704565	19704736	100	+	.	Parent=FBgn0024921.1.mrna1;Target=FBgn0024921.1 2047 2218 +
Chr1	stalkie_big_nohaplotig	exon	19704798	19704893	100	+	.	Parent=FBgn0024921.1.mrna1;Target=FBgn0024921.1 2219 2314 +
Chr1	stalkie_big_nohaplotig	exon	19705271	19705346	100	+	.	Parent=FBgn0024921.1.mrna1;Target=FBgn0024921.1 2315 2390 +
Chr1	stalkie_big_nohaplotig	exon	19705552	19705726	100	+	.	Parent=FBgn0024921.1.mrna1;Target=FBgn0024921.1 2391 2565 +
Chr1	stalkie_big_nohaplotig	exon	19707411	19707515	100	+	.	Parent=FBgn0024921.1.mrna1;Target=FBgn0024921.1 2566 2670 +
Chr1	stalkie_big_nohaplotig	CDS	19701644	19701748	.	+	0	Parent=FBgn0024921.1.mrna1;Target=FBgn0024921.1 1 105 +
Chr1	stalkie_big_nohaplotig	CDS	19701904	19702575	.	+	0	Parent=FBgn0024921.1.mrna1;Target=FBgn0024921.1 106 777 +
Chr1	stalkie_big_nohaplotig	CDS	19702635	19703732	.	+	0	Parent=FBgn0024921.1.mrna1;Target=FBgn0024921.1 778 1875 +
Chr1	stalkie_big_nohaplotig	CDS	19703791	19703961	.	+	0	Parent=FBgn0024921.1.mrna1;Target=FBgn0024921.1 1876 2046 +
Chr1	stalkie_big_nohaplotig	CDS	19704565	19704736	.	+	0	Parent=FBgn0024921.1.mrna1;Target=FBgn0024921.1 2047 2218 +
Chr1	stalkie_big_nohaplotig	CDS	19704798	19704893	.	+	2	Parent=FBgn0024921.1.mrna1;Target=FBgn0024921.1 2219 2314 +
Chr1	stalkie_big_nohaplotig	CDS	19705271	19705346	.	+	2	Parent=FBgn0024921.1.mrna1;Target=FBgn0024921.1 2315 2390 +
Chr1	stalkie_big_nohaplotig	CDS	19705552	19705726	.	+	1	Parent=FBgn0024921.1.mrna1;Target=FBgn0024921.1 2391 2565 +
Chr1	stalkie_big_nohaplotig	CDS	19707411	19707515	.	+	0	Parent=FBgn0024921.1.mrna1;Target=FBgn0024921.1 2566 2670 +
Chr1	gffcl	locus	19720143	19725878	.	+	.	ID=RLOC_00006312;geneIDs=FBgn0035392.1.path1;transcripts=FBgn0035392.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19720143	19725878	.	+	.	ID=FBgn0035392.1.mrna1;geneID=FBgn0035392.1.path1;Name=FBgn0035392.1;Dir=sensecoverage=100.0;identity=99.5;matches=1621;mismatches=8;indels=0;unknowns=0;locus=RLOC_00006312
Chr1	stalkie_big_nohaplotig	exon	19720143	19720277	100	+	.	Parent=FBgn0035392.1.mrna1;Target=FBgn0035392.1 1 135 +
Chr1	stalkie_big_nohaplotig	exon	19720365	19720458	100	+	.	Parent=FBgn0035392.1.mrna1;Target=FBgn0035392.1 136 229 +
Chr1	stalkie_big_nohaplotig	exon	19723648	19723907	100	+	.	Parent=FBgn0035392.1.mrna1;Target=FBgn0035392.1 230 489 +
Chr1	stalkie_big_nohaplotig	exon	19723974	19724086	100	+	.	Parent=FBgn0035392.1.mrna1;Target=FBgn0035392.1 490 602 +
Chr1	stalkie_big_nohaplotig	exon	19724144	19724270	100	+	.	Parent=FBgn0035392.1.mrna1;Target=FBgn0035392.1 603 729 +
Chr1	stalkie_big_nohaplotig	exon	19724789	19724975	100	+	.	Parent=FBgn0035392.1.mrna1;Target=FBgn0035392.1 730 916 +
Chr1	stalkie_big_nohaplotig	exon	19725037	19725311	97	+	.	Parent=FBgn0035392.1.mrna1;Target=FBgn0035392.1 917 1191 +
Chr1	stalkie_big_nohaplotig	exon	19725375	19725538	100	+	.	Parent=FBgn0035392.1.mrna1;Target=FBgn0035392.1 1192 1355 +
Chr1	stalkie_big_nohaplotig	exon	19725605	19725878	99	+	.	Parent=FBgn0035392.1.mrna1;Target=FBgn0035392.1 1356 1629 +
Chr1	stalkie_big_nohaplotig	CDS	19720143	19720277	.	+	0	Parent=FBgn0035392.1.mrna1;Target=FBgn0035392.1 1 135 +
Chr1	stalkie_big_nohaplotig	CDS	19720365	19720458	.	+	0	Parent=FBgn0035392.1.mrna1;Target=FBgn0035392.1 136 229 +
Chr1	stalkie_big_nohaplotig	CDS	19723648	19723907	.	+	2	Parent=FBgn0035392.1.mrna1;Target=FBgn0035392.1 230 489 +
Chr1	stalkie_big_nohaplotig	CDS	19723974	19724086	.	+	0	Parent=FBgn0035392.1.mrna1;Target=FBgn0035392.1 490 602 +
Chr1	stalkie_big_nohaplotig	CDS	19724144	19724270	.	+	1	Parent=FBgn0035392.1.mrna1;Target=FBgn0035392.1 603 729 +
Chr1	stalkie_big_nohaplotig	CDS	19724789	19724975	.	+	0	Parent=FBgn0035392.1.mrna1;Target=FBgn0035392.1 730 916 +
Chr1	stalkie_big_nohaplotig	CDS	19725037	19725311	.	+	2	Parent=FBgn0035392.1.mrna1;Target=FBgn0035392.1 917 1191 +
Chr1	stalkie_big_nohaplotig	CDS	19725375	19725538	.	+	0	Parent=FBgn0035392.1.mrna1;Target=FBgn0035392.1 1192 1355 +
Chr1	stalkie_big_nohaplotig	CDS	19725605	19725878	.	+	1	Parent=FBgn0035392.1.mrna1;Target=FBgn0035392.1 1356 1629 +
Chr1	gffcl	locus	19731312	19732051	.	-	.	ID=RLOC_00006314;geneIDs=comp152152_c1_seq1.path1;transcripts=comp152152_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19731312	19732051	.	-	.	ID=comp152152_c1_seq1.mrna1;geneID=comp152152_c1_seq1.path1;Name=comp152152_c1_seq1;Dir=indeterminatecoverage=97.8;identity=93.1;matches=698;mismatches=38;indels=14;unknowns=0;Target=comp152152_c1_seq1 763 18 .;CDS_Target=comp152152_c1_seq1 695 447 .;locus=RLOC_00006314
Chr1	stalkie_big_nohaplotig	exon	19731312	19732051	93	-	.	Parent=comp152152_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19731380	19731628	.	-	0	Parent=comp152152_c1_seq1.mrna1
Chr1	gffcl	locus	19736801	20469130	.	+	.	ID=RLOC_00006315;geneIDs=comp152438_c0_seq1.path1;transcripts=comp152438_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19736801	20469130	.	+	.	ID=comp152438_c0_seq1.mrna1;geneID=comp152438_c0_seq1.path1;Name=comp152438_c0_seq1;Dir=indeterminatecoverage=90.2;identity=98.5;matches=709;mismatches=10;indels=1;unknowns=0;Target=comp152438_c0_seq1 24 1 .;locus=RLOC_00006315
Chr1	stalkie_big_nohaplotig	exon	19736801	19737501	98	+	.	Parent=comp152438_c0_seq1.mrna1;Target=comp152438_c0_seq1 700 1 .
Chr1	stalkie_big_nohaplotig	exon	20457623	20457624	100	+	.	Parent=comp152438_c0_seq1.mrna1;Target=comp152438_c0_seq1 702 701 .
Chr1	stalkie_big_nohaplotig	exon	20465222	20465225	100	+	.	Parent=comp152438_c0_seq1.mrna1;Target=comp152438_c0_seq1 706 703 .
Chr1	stalkie_big_nohaplotig	exon	20467000	20467006	100	+	.	Parent=comp152438_c0_seq1.mrna1;Target=comp152438_c0_seq1 713 707 .
Chr1	stalkie_big_nohaplotig	exon	20469125	20469130	100	+	.	Parent=comp152438_c0_seq1.mrna1;Target=comp152438_c0_seq1 719 714 .
Chr1	stalkie_big_nohaplotig	CDS	19736801	19736825	.	+	0	Parent=comp152438_c0_seq1.mrna1
Chr1	gffcl	locus	19737862	19738264	.	+	.	ID=RLOC_00006316;geneIDs=comp98820_c0_seq1.path1;transcripts=comp98820_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19737862	19738264	.	+	.	ID=comp98820_c0_seq1.mrna1;geneID=comp98820_c0_seq1.path1;Name=comp98820_c0_seq1;Dir=indeterminatecoverage=95.3;identity=91.2;matches=374;mismatches=27;indels=9;unknowns=0;Target=comp98820_c0_seq1 428 21 .;CDS_Target=comp98820_c0_seq1 421 266 .;locus=RLOC_00006316
Chr1	stalkie_big_nohaplotig	exon	19737862	19738264	91	+	.	Parent=comp98820_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19738104	19738257	.	+	0	Parent=comp98820_c0_seq1.mrna1
Chr1	gffcl	locus	19741007	19741414	.	+	.	ID=RLOC_00006317;geneIDs=comp115773_c0_seq1.path1;transcripts=comp115773_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19741007	19741414	.	+	.	ID=comp115773_c0_seq1.mrna1;geneID=comp115773_c0_seq1.path1;Name=comp115773_c0_seq1;Dir=indeterminatecoverage=86.6;identity=100.0;matches=408;mismatches=0;indels=0;unknowns=0;Target=comp115773_c0_seq1 408 1 .;CDS_Target=comp115773_c0_seq1 407 306 .;locus=RLOC_00006317
Chr1	stalkie_big_nohaplotig	exon	19741007	19741414	100	+	.	Parent=comp115773_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19741312	19741413	.	+	0	Parent=comp115773_c0_seq1.mrna1
Chr1	gffcl	locus	19752660	19754224	.	-	.	ID=RLOC_00006318;geneIDs=FBgn0024285.1.path1;transcripts=FBgn0024285.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19752660	19754224	.	-	.	ID=FBgn0024285.1.mrna1;geneID=FBgn0024285.1.path1;Name=FBgn0024285.1;Dir=sensecoverage=100.0;identity=99.9;matches=1498;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006318
Chr1	stalkie_big_nohaplotig	exon	19752660	19753760	100	-	.	Parent=FBgn0024285.1.mrna1;Target=FBgn0024285.1 400 1500 +
Chr1	stalkie_big_nohaplotig	exon	19753826	19754224	99	-	.	Parent=FBgn0024285.1.mrna1;Target=FBgn0024285.1 1 399 +
Chr1	stalkie_big_nohaplotig	CDS	19752660	19753760	.	-	0	Parent=FBgn0024285.1.mrna1;Target=FBgn0024285.1 400 1500 +
Chr1	stalkie_big_nohaplotig	CDS	19753826	19754224	.	-	0	Parent=FBgn0024285.1.mrna1;Target=FBgn0024285.1 1 399 +
Chr1	gffcl	locus	19756640	19765918	.	+	.	ID=RLOC_00006319;geneIDs=FBgn0035229.1.path1;transcripts=FBgn0035229.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19756640	19765918	.	+	.	ID=FBgn0035229.1.mrna1;geneID=FBgn0035229.1.path1;Name=FBgn0035229.1;Dir=sensecoverage=100.0;identity=99.8;matches=4493;mismatches=7;indels=3;unknowns=0;locus=RLOC_00006319
Chr1	stalkie_big_nohaplotig	exon	19756640	19757117	99	+	.	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 1 475 +
Chr1	stalkie_big_nohaplotig	exon	19757194	19757303	100	+	.	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 476 585 +
Chr1	stalkie_big_nohaplotig	exon	19759283	19759453	100	+	.	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 586 756 +
Chr1	stalkie_big_nohaplotig	exon	19759534	19759772	100	+	.	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 757 995 +
Chr1	stalkie_big_nohaplotig	exon	19759843	19760132	100	+	.	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 996 1285 +
Chr1	stalkie_big_nohaplotig	exon	19760200	19761235	100	+	.	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 1286 2321 +
Chr1	stalkie_big_nohaplotig	exon	19761898	19762104	100	+	.	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 2322 2528 +
Chr1	stalkie_big_nohaplotig	exon	19762649	19762823	100	+	.	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 2529 2703 +
Chr1	stalkie_big_nohaplotig	exon	19762890	19763202	99	+	.	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 2704 3016 +
Chr1	stalkie_big_nohaplotig	exon	19763423	19763458	100	+	.	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 3017 3052 +
Chr1	stalkie_big_nohaplotig	exon	19763524	19763656	100	+	.	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 3053 3185 +
Chr1	stalkie_big_nohaplotig	exon	19763736	19763986	100	+	.	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 3186 3436 +
Chr1	stalkie_big_nohaplotig	exon	19764054	19764199	97	+	.	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 3437 3582 +
Chr1	stalkie_big_nohaplotig	exon	19764265	19764383	98	+	.	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 3583 3701 +
Chr1	stalkie_big_nohaplotig	exon	19764455	19764831	100	+	.	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 3702 4078 +
Chr1	stalkie_big_nohaplotig	exon	19764891	19765125	99	+	.	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 4079 4313 +
Chr1	stalkie_big_nohaplotig	exon	19765732	19765918	100	+	.	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 4314 4500 +
Chr1	stalkie_big_nohaplotig	CDS	19756640	19757117	.	+	0	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 1 475 +
Chr1	stalkie_big_nohaplotig	CDS	19757194	19757303	.	+	2	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 476 585 +
Chr1	stalkie_big_nohaplotig	CDS	19759283	19759453	.	+	0	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 586 756 +
Chr1	stalkie_big_nohaplotig	CDS	19759534	19759772	.	+	0	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 757 995 +
Chr1	stalkie_big_nohaplotig	CDS	19759843	19760132	.	+	1	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 996 1285 +
Chr1	stalkie_big_nohaplotig	CDS	19760200	19761235	.	+	2	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 1286 2321 +
Chr1	stalkie_big_nohaplotig	CDS	19761898	19762104	.	+	1	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 2322 2528 +
Chr1	stalkie_big_nohaplotig	CDS	19762649	19762823	.	+	1	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 2529 2703 +
Chr1	stalkie_big_nohaplotig	CDS	19762890	19763202	.	+	0	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 2704 3016 +
Chr1	stalkie_big_nohaplotig	CDS	19763423	19763458	.	+	2	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 3017 3052 +
Chr1	stalkie_big_nohaplotig	CDS	19763524	19763656	.	+	2	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 3053 3185 +
Chr1	stalkie_big_nohaplotig	CDS	19763736	19763986	.	+	1	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 3186 3436 +
Chr1	stalkie_big_nohaplotig	CDS	19764054	19764199	.	+	2	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 3437 3582 +
Chr1	stalkie_big_nohaplotig	CDS	19764265	19764383	.	+	0	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 3583 3701 +
Chr1	stalkie_big_nohaplotig	CDS	19764455	19764831	.	+	1	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 3702 4078 +
Chr1	stalkie_big_nohaplotig	CDS	19764891	19765125	.	+	2	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 4079 4313 +
Chr1	stalkie_big_nohaplotig	CDS	19765732	19765918	.	+	1	Parent=FBgn0035229.1.mrna1;Target=FBgn0035229.1 4314 4500 +
Chr1	gffcl	locus	19766066	19766840	.	-	.	ID=RLOC_00006320;geneIDs=comp113340_c0_seq1.path1;transcripts=comp113340_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19766066	19766840	.	-	.	ID=comp113340_c0_seq1.mrna1;geneID=comp113340_c0_seq1.path1;Name=comp113340_c0_seq1;Dir=indeterminatecoverage=95.7;identity=95.7;matches=762;mismatches=11;indels=23;unknowns=0;Target=comp113340_c0_seq1 830 37 .;CDS_Target=comp113340_c0_seq1 138 37 .;locus=RLOC_00006320
Chr1	stalkie_big_nohaplotig	exon	19766066	19766840	95	-	.	Parent=comp113340_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19766739	19766840	.	-	0	Parent=comp113340_c0_seq1.mrna1
Chr1	gffcl	locus	19790876	19791459	.	-	.	ID=RLOC_00006321;geneIDs=FBgn0015805.1.path1;transcripts=FBgn0015805.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19790876	19791459	.	-	.	ID=FBgn0015805.1.mrna1;geneID=FBgn0015805.1.path1;Name=FBgn0015805.1;Dir=sensecoverage=11.0;identity=99.4;matches=159;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006321
Chr1	stalkie_big_nohaplotig	exon	19790876	19790988	100	-	.	Parent=FBgn0015805.1.mrna1;Target=FBgn0015805.1 50 162 +
Chr1	stalkie_big_nohaplotig	exon	19791413	19791459	97	-	.	Parent=FBgn0015805.1.mrna1;Target=FBgn0015805.1 3 49 +
Chr1	stalkie_big_nohaplotig	CDS	19790876	19790988	.	-	2	Parent=FBgn0015805.1.mrna1;Target=FBgn0015805.1 50 162 +
Chr1	stalkie_big_nohaplotig	CDS	19791413	19791458	.	-	0	Parent=FBgn0015805.1.mrna1;Target=FBgn0015805.1 4 49 +
Chr1	gffcl	locus	19852716	19854127	.	+	.	ID=RLOC_00006323;geneIDs=comp150671_c0_seq1.path1;transcripts=comp150671_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19852716	19854127	.	+	.	ID=comp150671_c0_seq1.mrna1;geneID=comp150671_c0_seq1.path1;Name=comp150671_c0_seq1;Dir=antisensecoverage=87.0;identity=99.4;matches=307;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006323
Chr1	stalkie_big_nohaplotig	exon	19852716	19852799	100	+	.	Parent=comp150671_c0_seq1.mrna1;Target=comp150671_c0_seq1 226 309 -
Chr1	stalkie_big_nohaplotig	exon	19852861	19852940	100	+	.	Parent=comp150671_c0_seq1.mrna1;Target=comp150671_c0_seq1 146 225 -
Chr1	stalkie_big_nohaplotig	exon	19853983	19854127	98	+	.	Parent=comp150671_c0_seq1.mrna1;Target=comp150671_c0_seq1 1 145 -
Chr1	stalkie_big_nohaplotig	CDS	19852718	19852799	.	+	0	Parent=comp150671_c0_seq1.mrna1;Target=comp150671_c0_seq1 226 307 .
Chr1	stalkie_big_nohaplotig	CDS	19852861	19852940	.	+	2	Parent=comp150671_c0_seq1.mrna1;Target=comp150671_c0_seq1 146 225 .
Chr1	stalkie_big_nohaplotig	CDS	19853983	19854126	.	+	0	Parent=comp150671_c0_seq1.mrna1;Target=comp150671_c0_seq1 2 145 .
Chr1	gffcl	locus	19856663	19857689	.	.	.	ID=RLOC_00006324;geneIDs=FBgn0030050.3.path1,comp134718_c1_seq1.path1;transcripts=FBgn0030050.3.mrna1,comp134718_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19856663	19857689	.	+	.	ID=FBgn0030050.3.mrna1;geneID=FBgn0030050.3.path1;Name=FBgn0030050.3;Dir=sensecoverage=99.3;identity=95.0;matches=518;mismatches=21;indels=6;unknowns=0;locus=RLOC_00006324
Chr1	stalkie_big_nohaplotig	exon	19856663	19856753	100	+	.	Parent=FBgn0030050.3.mrna1;Target=FBgn0030050.3 4 94 +
Chr1	stalkie_big_nohaplotig	exon	19856809	19856888	100	+	.	Parent=FBgn0030050.3.mrna1;Target=FBgn0030050.3 95 174 +
Chr1	stalkie_big_nohaplotig	exon	19857322	19857689	92	+	.	Parent=FBgn0030050.3.mrna1;Target=FBgn0030050.3 175 548 +
Chr1	stalkie_big_nohaplotig	CDS	19856663	19856753	.	+	0	Parent=FBgn0030050.3.mrna1;Target=FBgn0030050.3 4 94 +
Chr1	stalkie_big_nohaplotig	CDS	19856809	19856888	.	+	2	Parent=FBgn0030050.3.mrna1;Target=FBgn0030050.3 95 174 +
Chr1	stalkie_big_nohaplotig	CDS	19857322	19857687	.	+	0	Parent=FBgn0030050.3.mrna1;Target=FBgn0030050.3 175 546 +
Chr1	stalkie_big_nohaplotig	mRNA	19857071	19857342	.	-	.	ID=comp134718_c1_seq1.mrna1;geneID=comp134718_c1_seq1.path1;Name=comp134718_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=272;mismatches=0;indels=0;unknowns=0;Target=comp134718_c1_seq1 272 1 .;CDS_Target=comp134718_c1_seq1 99 1 .;locus=RLOC_00006324
Chr1	stalkie_big_nohaplotig	exon	19857071	19857342	100	-	.	Parent=comp134718_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	19857244	19857342	.	-	0	Parent=comp134718_c1_seq1.mrna1
Chr1	gffcl	locus	19888640	19911483	.	+	.	ID=RLOC_00006325;geneIDs=FBgn0005640.1.path1;transcripts=FBgn0005640.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	19888640	19911483	.	+	.	ID=FBgn0005640.1.mrna1;geneID=FBgn0005640.1.path1;Name=FBgn0005640.1;Dir=sensecoverage=87.2;identity=99.8;matches=1115;mismatches=1;indels=1;unknowns=0;locus=RLOC_00006325
Chr1	stalkie_big_nohaplotig	exon	19888640	19888847	100	+	.	Parent=FBgn0005640.1.mrna1;Target=FBgn0005640.1 165 372 +
Chr1	stalkie_big_nohaplotig	exon	19890404	19890495	100	+	.	Parent=FBgn0005640.1.mrna1;Target=FBgn0005640.1 373 464 +
Chr1	stalkie_big_nohaplotig	exon	19899862	19900036	100	+	.	Parent=FBgn0005640.1.mrna1;Target=FBgn0005640.1 465 639 +
Chr1	stalkie_big_nohaplotig	exon	19900114	19900375	100	+	.	Parent=FBgn0005640.1.mrna1;Target=FBgn0005640.1 640 901 +
Chr1	stalkie_big_nohaplotig	exon	19908455	19908667	99	+	.	Parent=FBgn0005640.1.mrna1;Target=FBgn0005640.1 902 1114 +
Chr1	stalkie_big_nohaplotig	exon	19911318	19911483	99	+	.	Parent=FBgn0005640.1.mrna1;Target=FBgn0005640.1 1115 1281 +
Chr1	stalkie_big_nohaplotig	CDS	19888641	19888847	.	+	0	Parent=FBgn0005640.1.mrna1;Target=FBgn0005640.1 166 372 +
Chr1	stalkie_big_nohaplotig	CDS	19890404	19890495	.	+	0	Parent=FBgn0005640.1.mrna1;Target=FBgn0005640.1 373 464 +
Chr1	stalkie_big_nohaplotig	CDS	19899862	19900036	.	+	1	Parent=FBgn0005640.1.mrna1;Target=FBgn0005640.1 465 639 +
Chr1	stalkie_big_nohaplotig	CDS	19900114	19900375	.	+	0	Parent=FBgn0005640.1.mrna1;Target=FBgn0005640.1 640 901 +
Chr1	stalkie_big_nohaplotig	CDS	19908455	19908667	.	+	2	Parent=FBgn0005640.1.mrna1;Target=FBgn0005640.1 902 1114 +
Chr1	stalkie_big_nohaplotig	CDS	19911318	19911483	.	+	2	Parent=FBgn0005640.1.mrna1;Target=FBgn0005640.1 1115 1281 +
Chr1	gffcl	locus	20128046	20128699	.	+	.	ID=RLOC_00006326;geneIDs=comp143954_c0_seq1.path1;transcripts=comp143954_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20128046	20128699	.	+	.	ID=comp143954_c0_seq1.mrna1;geneID=comp143954_c0_seq1.path1;Name=comp143954_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=648;mismatches=6;indels=1;unknowns=0;Target=comp143954_c0_seq1 655 1 .;CDS_Target=comp143954_c0_seq1 446 354 .;locus=RLOC_00006326
Chr1	stalkie_big_nohaplotig	exon	20128046	20128699	98	+	.	Parent=comp143954_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	20128399	20128491	.	+	0	Parent=comp143954_c0_seq1.mrna1
Chr1	gffcl	locus	20144032	20145462	.	+	.	ID=RLOC_00006327;geneIDs=FBgn0001254.1.path1;transcripts=FBgn0001254.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20144032	20145462	.	+	.	ID=FBgn0001254.1.mrna1;geneID=FBgn0001254.1.path1;Name=FBgn0001254.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1419;mismatches=12;indels=0;unknowns=0;Target=FBgn0001254.1 1431 1 .;locus=RLOC_00006327
Chr1	stalkie_big_nohaplotig	exon	20144032	20145462	99	+	.	Parent=FBgn0001254.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	20144032	20145462	.	+	0	Parent=FBgn0001254.1.mrna1
Chr1	gffcl	locus	20150553	20150994	.	+	.	ID=RLOC_00006328;geneIDs=comp150766_c1_seq1.path1;transcripts=comp150766_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20150553	20150994	.	+	.	ID=comp150766_c1_seq1.mrna1;geneID=comp150766_c1_seq1.path1;Name=comp150766_c1_seq1;Dir=indeterminatecoverage=89.9;identity=99.8;matches=428;mismatches=1;indels=0;unknowns=0;Target=comp150766_c1_seq1 24 18 .;locus=RLOC_00006328
Chr1	stalkie_big_nohaplotig	exon	20150553	20150576	100	+	.	Parent=comp150766_c1_seq1.mrna1;Target=comp150766_c1_seq1 24 1 .
Chr1	stalkie_big_nohaplotig	exon	20150590	20150994	99	+	.	Parent=comp150766_c1_seq1.mrna1;Target=comp150766_c1_seq1 558 154 .
Chr1	stalkie_big_nohaplotig	CDS	20150570	20150576	.	+	0	Parent=comp150766_c1_seq1.mrna1
Chr1	gffcl	locus	20153550	20155807	.	-	.	ID=RLOC_00006329;geneIDs=comp144202_c1_seq1.path1;transcripts=comp144202_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20153550	20155807	.	-	.	ID=comp144202_c1_seq1.mrna1;geneID=comp144202_c1_seq1.path1;Name=comp144202_c1_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=434;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006329
Chr1	stalkie_big_nohaplotig	exon	20153550	20153572	100	-	.	Parent=comp144202_c1_seq1.mrna1;Target=comp144202_c1_seq1 1 23 -
Chr1	stalkie_big_nohaplotig	exon	20155397	20155807	100	-	.	Parent=comp144202_c1_seq1.mrna1;Target=comp144202_c1_seq1 24 434 -
Chr1	stalkie_big_nohaplotig	CDS	20153552	20153572	.	-	0	Parent=comp144202_c1_seq1.mrna1;Target=comp144202_c1_seq1 3 23 .
Chr1	stalkie_big_nohaplotig	CDS	20155397	20155807	.	-	0	Parent=comp144202_c1_seq1.mrna1;Target=comp144202_c1_seq1 24 434 .
Chr1	gffcl	locus	20246565	20251377	.	+	.	ID=RLOC_00006330;geneIDs=FBgn0004915.3.path1,comp162469_c0_seq1.path1;transcripts=comp162469_c0_seq1.mrna1,FBgn0004915.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20246565	20251377	.	+	.	ID=comp162469_c0_seq1.mrna1;geneID=comp162469_c0_seq1.path1;Name=comp162469_c0_seq1;Dir=antisensecoverage=99.9;identity=97.8;matches=3870;mismatches=76;indels=10;unknowns=0;locus=RLOC_00006330
Chr1	stalkie_big_nohaplotig	exon	20246565	20246744	98	+	.	Parent=comp162469_c0_seq1.mrna1;Target=comp162469_c0_seq1 3769 3948 -
Chr1	stalkie_big_nohaplotig	exon	20247230	20247351	99	+	.	Parent=comp162469_c0_seq1.mrna1;Target=comp162469_c0_seq1 3647 3768 -
Chr1	stalkie_big_nohaplotig	exon	20247431	20247839	98	+	.	Parent=comp162469_c0_seq1.mrna1;Target=comp162469_c0_seq1 3238 3646 -
Chr1	stalkie_big_nohaplotig	exon	20247892	20248126	99	+	.	Parent=comp162469_c0_seq1.mrna1;Target=comp162469_c0_seq1 3003 3237 -
Chr1	stalkie_big_nohaplotig	exon	20248181	20248302	99	+	.	Parent=comp162469_c0_seq1.mrna1;Target=comp162469_c0_seq1 2881 3002 -
Chr1	stalkie_big_nohaplotig	exon	20248391	20250715	97	+	.	Parent=comp162469_c0_seq1.mrna1;Target=comp162469_c0_seq1 556 2880 -
Chr1	stalkie_big_nohaplotig	exon	20250815	20251377	95	+	.	Parent=comp162469_c0_seq1.mrna1;Target=comp162469_c0_seq1 3 555 -
Chr1	stalkie_big_nohaplotig	CDS	20247332	20247351	.	+	0	Parent=comp162469_c0_seq1.mrna1;Target=comp162469_c0_seq1 3647 3666 .
Chr1	stalkie_big_nohaplotig	CDS	20247431	20247839	.	+	1	Parent=comp162469_c0_seq1.mrna1;Target=comp162469_c0_seq1 3238 3646 .
Chr1	stalkie_big_nohaplotig	CDS	20247892	20248126	.	+	0	Parent=comp162469_c0_seq1.mrna1;Target=comp162469_c0_seq1 3003 3237 .
Chr1	stalkie_big_nohaplotig	CDS	20248181	20248302	.	+	2	Parent=comp162469_c0_seq1.mrna1;Target=comp162469_c0_seq1 2881 3002 .
Chr1	stalkie_big_nohaplotig	CDS	20248391	20250715	.	+	0	Parent=comp162469_c0_seq1.mrna1;Target=comp162469_c0_seq1 556 2880 .
Chr1	stalkie_big_nohaplotig	CDS	20250815	20251003	.	+	0	Parent=comp162469_c0_seq1.mrna1;Target=comp162469_c0_seq1 367 555 .
Chr1	stalkie_big_nohaplotig	mRNA	20247248	20250745	.	+	.	ID=FBgn0004915.3.mrna1;geneID=FBgn0004915.3.path1;Name=FBgn0004915.3;Dir=sensecoverage=100.0;identity=98.2;matches=3166;mismatches=59;indels=0;unknowns=0;locus=RLOC_00006330
Chr1	stalkie_big_nohaplotig	exon	20247248	20247351	99	+	.	Parent=FBgn0004915.3.mrna1;Target=FBgn0004915.3 1 104 +
Chr1	stalkie_big_nohaplotig	exon	20247431	20247839	98	+	.	Parent=FBgn0004915.3.mrna1;Target=FBgn0004915.3 105 513 +
Chr1	stalkie_big_nohaplotig	exon	20247892	20248126	99	+	.	Parent=FBgn0004915.3.mrna1;Target=FBgn0004915.3 514 748 +
Chr1	stalkie_big_nohaplotig	exon	20248181	20248302	99	+	.	Parent=FBgn0004915.3.mrna1;Target=FBgn0004915.3 749 870 +
Chr1	stalkie_big_nohaplotig	exon	20248391	20250745	97	+	.	Parent=FBgn0004915.3.mrna1;Target=FBgn0004915.3 871 3225 +
Chr1	stalkie_big_nohaplotig	CDS	20247248	20247351	.	+	0	Parent=FBgn0004915.3.mrna1;Target=FBgn0004915.3 1 104 +
Chr1	stalkie_big_nohaplotig	CDS	20247431	20247839	.	+	1	Parent=FBgn0004915.3.mrna1;Target=FBgn0004915.3 105 513 +
Chr1	stalkie_big_nohaplotig	CDS	20247892	20248126	.	+	0	Parent=FBgn0004915.3.mrna1;Target=FBgn0004915.3 514 748 +
Chr1	stalkie_big_nohaplotig	CDS	20248181	20248302	.	+	2	Parent=FBgn0004915.3.mrna1;Target=FBgn0004915.3 749 870 +
Chr1	stalkie_big_nohaplotig	CDS	20248391	20250745	.	+	0	Parent=FBgn0004915.3.mrna1;Target=FBgn0004915.3 871 3225 +
Chr1	gffcl	locus	20266245	20267015	.	-	.	ID=RLOC_00006331;geneIDs=comp122896_c0_seq1.path1;transcripts=comp122896_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20266245	20267015	.	-	.	ID=comp122896_c0_seq1.mrna1;geneID=comp122896_c0_seq1.path1;Name=comp122896_c0_seq1;Dir=sensecoverage=99.0;identity=100.0;matches=706;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006331
Chr1	stalkie_big_nohaplotig	exon	20266245	20266657	100	-	.	Parent=comp122896_c0_seq1.mrna1;Target=comp122896_c0_seq1 301 713 +
Chr1	stalkie_big_nohaplotig	exon	20266723	20267015	100	-	.	Parent=comp122896_c0_seq1.mrna1;Target=comp122896_c0_seq1 8 300 +
Chr1	stalkie_big_nohaplotig	CDS	20266547	20266657	.	-	0	Parent=comp122896_c0_seq1.mrna1;Target=comp122896_c0_seq1 301 411 +
Chr1	stalkie_big_nohaplotig	CDS	20266723	20266917	.	-	0	Parent=comp122896_c0_seq1.mrna1;Target=comp122896_c0_seq1 106 300 +
Chr1	gffcl	locus	20273964	20274208	.	-	.	ID=RLOC_00006332;geneIDs=comp790159_c0_seq1.path1;transcripts=comp790159_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20273964	20274208	.	-	.	ID=comp790159_c0_seq1.mrna1;geneID=comp790159_c0_seq1.path1;Name=comp790159_c0_seq1;Dir=indeterminatecoverage=72.7;identity=100.0;matches=245;mismatches=0;indels=0;unknowns=0;Target=comp790159_c0_seq1 247 3 .;CDS_Target=comp790159_c0_seq1 246 43 .;locus=RLOC_00006332
Chr1	stalkie_big_nohaplotig	exon	20273964	20274208	100	-	.	Parent=comp790159_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	20273965	20274168	.	-	0	Parent=comp790159_c0_seq1.mrna1
Chr1	gffcl	locus	20295456	20295763	.	+	.	ID=RLOC_00006333;geneIDs=comp136830_c0_seq1.path1;transcripts=comp136830_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20295456	20295763	.	+	.	ID=comp136830_c0_seq1.mrna1;geneID=comp136830_c0_seq1.path1;Name=comp136830_c0_seq1;Dir=indeterminatecoverage=96.6;identity=100.0;matches=308;mismatches=0;indels=0;unknowns=0;Target=comp136830_c0_seq1 308 1 .;CDS_Target=comp136830_c0_seq1 38 3 .;locus=RLOC_00006333
Chr1	stalkie_big_nohaplotig	exon	20295456	20295763	100	+	.	Parent=comp136830_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	20295458	20295493	.	+	0	Parent=comp136830_c0_seq1.mrna1
Chr1	gffcl	locus	20296056	20296585	.	-	.	ID=RLOC_00006334;geneIDs=comp144229_c0_seq1.path1;transcripts=comp144229_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20296056	20296585	.	-	.	ID=comp144229_c0_seq1.mrna1;geneID=comp144229_c0_seq1.path1;Name=comp144229_c0_seq1;Dir=indeterminatecoverage=95.2;identity=96.8;matches=522;mismatches=8;indels=9;unknowns=0;Target=comp144229_c0_seq1 540 2 .;CDS_Target=comp144229_c0_seq1 353 234 .;locus=RLOC_00006334
Chr1	stalkie_big_nohaplotig	exon	20296056	20296585	96	-	.	Parent=comp144229_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	20296243	20296361	.	-	0	Parent=comp144229_c0_seq1.mrna1
Chr1	gffcl	locus	20298241	20298449	.	-	.	ID=RLOC_00006335;geneIDs=comp151800_c1_seq1.path1;transcripts=comp151800_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20298241	20298449	.	-	.	ID=comp151800_c1_seq1.mrna1;geneID=comp151800_c1_seq1.path1;Name=comp151800_c1_seq1;Dir=indeterminatecoverage=100.0;identity=93.4;matches=197;mismatches=12;indels=2;unknowns=0;Target=comp151800_c1_seq1 211 1 .;CDS_Target=comp151800_c1_seq1 131 15 .;locus=RLOC_00006335
Chr1	stalkie_big_nohaplotig	exon	20298241	20298449	93	-	.	Parent=comp151800_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	20298319	20298435	.	-	0	Parent=comp151800_c1_seq1.mrna1
Chr1	gffcl	locus	20298537	20298781	.	+	.	ID=RLOC_00006336;geneIDs=comp153800_c0_seq1.path1;transcripts=comp153800_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20298537	20298781	.	+	.	ID=comp153800_c0_seq1.mrna1;geneID=comp153800_c0_seq1.path1;Name=comp153800_c0_seq1;Dir=indeterminatecoverage=91.8;identity=96.3;matches=236;mismatches=9;indels=0;unknowns=0;Target=comp153800_c0_seq1 245 1 .;CDS_Target=comp153800_c0_seq1 64 2 .;locus=RLOC_00006336
Chr1	stalkie_big_nohaplotig	exon	20298537	20298781	96	+	.	Parent=comp153800_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	20298538	20298600	.	+	0	Parent=comp153800_c0_seq1.mrna1
Chr1	gffcl	locus	20320651	20320975	.	+	.	ID=RLOC_00006337;geneIDs=comp135735_c0_seq1.path1;transcripts=comp135735_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20320651	20320975	.	+	.	ID=comp135735_c0_seq1.mrna1;geneID=comp135735_c0_seq1.path1;Name=comp135735_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=322;mismatches=3;indels=0;unknowns=0;Target=comp135735_c0_seq1 325 1 .;CDS_Target=comp135735_c0_seq1 62 3 .;locus=RLOC_00006337
Chr1	stalkie_big_nohaplotig	exon	20320651	20320975	99	+	.	Parent=comp135735_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	20320653	20320712	.	+	0	Parent=comp135735_c0_seq1.mrna1
Chr1	gffcl	locus	20321024	20338962	.	+	.	ID=RLOC_00006338;geneIDs=FBgn0035452.2.path1;transcripts=FBgn0035452.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20321024	20338962	.	+	.	ID=FBgn0035452.2.mrna1;geneID=FBgn0035452.2.path1;Name=FBgn0035452.2;Dir=sensecoverage=100.0;identity=99.8;matches=1536;mismatches=3;indels=0;unknowns=0;locus=RLOC_00006338
Chr1	stalkie_big_nohaplotig	exon	20321024	20321230	100	+	.	Parent=FBgn0035452.2.mrna1;Target=FBgn0035452.2 1 207 +
Chr1	stalkie_big_nohaplotig	exon	20321901	20322031	100	+	.	Parent=FBgn0035452.2.mrna1;Target=FBgn0035452.2 208 338 +
Chr1	stalkie_big_nohaplotig	exon	20335545	20335744	100	+	.	Parent=FBgn0035452.2.mrna1;Target=FBgn0035452.2 339 538 +
Chr1	stalkie_big_nohaplotig	exon	20335945	20336149	99	+	.	Parent=FBgn0035452.2.mrna1;Target=FBgn0035452.2 539 743 +
Chr1	stalkie_big_nohaplotig	exon	20338092	20338730	99	+	.	Parent=FBgn0035452.2.mrna1;Target=FBgn0035452.2 744 1382 +
Chr1	stalkie_big_nohaplotig	exon	20338806	20338962	99	+	.	Parent=FBgn0035452.2.mrna1;Target=FBgn0035452.2 1383 1539 +
Chr1	stalkie_big_nohaplotig	CDS	20321024	20321230	.	+	0	Parent=FBgn0035452.2.mrna1;Target=FBgn0035452.2 1 207 +
Chr1	stalkie_big_nohaplotig	CDS	20321901	20322031	.	+	0	Parent=FBgn0035452.2.mrna1;Target=FBgn0035452.2 208 338 +
Chr1	stalkie_big_nohaplotig	CDS	20335545	20335744	.	+	1	Parent=FBgn0035452.2.mrna1;Target=FBgn0035452.2 339 538 +
Chr1	stalkie_big_nohaplotig	CDS	20335945	20336149	.	+	2	Parent=FBgn0035452.2.mrna1;Target=FBgn0035452.2 539 743 +
Chr1	stalkie_big_nohaplotig	CDS	20338092	20338730	.	+	1	Parent=FBgn0035452.2.mrna1;Target=FBgn0035452.2 744 1382 +
Chr1	stalkie_big_nohaplotig	CDS	20338806	20338962	.	+	1	Parent=FBgn0035452.2.mrna1;Target=FBgn0035452.2 1383 1539 +
Chr1	gffcl	locus	20427983	20428703	.	-	.	ID=RLOC_00006339;geneIDs=comp152411_c0_seq1.path1;transcripts=comp152411_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20427983	20428703	.	-	.	ID=comp152411_c0_seq1.mrna1;geneID=comp152411_c0_seq1.path1;Name=comp152411_c0_seq1;Dir=antisensecoverage=99.7;identity=97.3;matches=645;mismatches=18;indels=0;unknowns=0;locus=RLOC_00006339
Chr1	stalkie_big_nohaplotig	exon	20427983	20428312	98	-	.	Parent=comp152411_c0_seq1.mrna1;Target=comp152411_c0_seq1 2 331 -
Chr1	stalkie_big_nohaplotig	exon	20428371	20428703	95	-	.	Parent=comp152411_c0_seq1.mrna1;Target=comp152411_c0_seq1 332 664 -
Chr1	stalkie_big_nohaplotig	CDS	20428001	20428312	.	-	0	Parent=comp152411_c0_seq1.mrna1;Target=comp152411_c0_seq1 20 331 .
Chr1	stalkie_big_nohaplotig	CDS	20428371	20428457	.	-	0	Parent=comp152411_c0_seq1.mrna1;Target=comp152411_c0_seq1 332 418 .
Chr1	gffcl	locus	20476951	20487203	.	+	.	ID=RLOC_00006341;geneIDs=FBgn0035411.1.path2;transcripts=FBgn0035411.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	20476951	20487203	.	+	.	ID=FBgn0035411.1.mrna2;geneID=FBgn0035411.1.path2;Name=FBgn0035411.1;Dir=sensecoverage=88.2;identity=99.8;matches=3655;mismatches=8;indels=0;unknowns=0;locus=RLOC_00006341
Chr1	stalkie_big_nohaplotig	exon	20476951	20477261	99	+	.	Parent=FBgn0035411.1.mrna2;Target=FBgn0035411.1 490 800 +
Chr1	stalkie_big_nohaplotig	exon	20478028	20478109	100	+	.	Parent=FBgn0035411.1.mrna2;Target=FBgn0035411.1 801 882 +
Chr1	stalkie_big_nohaplotig	exon	20478172	20478368	100	+	.	Parent=FBgn0035411.1.mrna2;Target=FBgn0035411.1 883 1079 +
Chr1	stalkie_big_nohaplotig	exon	20478438	20478723	100	+	.	Parent=FBgn0035411.1.mrna2;Target=FBgn0035411.1 1080 1365 +
Chr1	stalkie_big_nohaplotig	exon	20478778	20480424	99	+	.	Parent=FBgn0035411.1.mrna2;Target=FBgn0035411.1 1366 3012 +
Chr1	stalkie_big_nohaplotig	exon	20480490	20480627	99	+	.	Parent=FBgn0035411.1.mrna2;Target=FBgn0035411.1 3013 3150 +
Chr1	stalkie_big_nohaplotig	exon	20482060	20482298	99	+	.	Parent=FBgn0035411.1.mrna2;Target=FBgn0035411.1 3151 3389 +
Chr1	stalkie_big_nohaplotig	exon	20482409	20482484	100	+	.	Parent=FBgn0035411.1.mrna2;Target=FBgn0035411.1 3390 3465 +
Chr1	stalkie_big_nohaplotig	exon	20482551	20482717	100	+	.	Parent=FBgn0035411.1.mrna2;Target=FBgn0035411.1 3466 3632 +
Chr1	stalkie_big_nohaplotig	exon	20482872	20482979	100	+	.	Parent=FBgn0035411.1.mrna2;Target=FBgn0035411.1 3633 3740 +
Chr1	stalkie_big_nohaplotig	exon	20486792	20487203	100	+	.	Parent=FBgn0035411.1.mrna2;Target=FBgn0035411.1 3741 4152 +
Chr1	stalkie_big_nohaplotig	CDS	20476951	20477261	.	+	0	Parent=FBgn0035411.1.mrna2;Target=FBgn0035411.1 490 800 +
Chr1	stalkie_big_nohaplotig	CDS	20478028	20478109	.	+	1	Parent=FBgn0035411.1.mrna2;Target=FBgn0035411.1 801 882 +
Chr1	stalkie_big_nohaplotig	CDS	20478172	20478368	.	+	0	Parent=FBgn0035411.1.mrna2;Target=FBgn0035411.1 883 1079 +
Chr1	stalkie_big_nohaplotig	CDS	20478438	20478723	.	+	1	Parent=FBgn0035411.1.mrna2;Target=FBgn0035411.1 1080 1365 +
Chr1	stalkie_big_nohaplotig	CDS	20478778	20480424	.	+	0	Parent=FBgn0035411.1.mrna2;Target=FBgn0035411.1 1366 3012 +
Chr1	stalkie_big_nohaplotig	CDS	20480490	20480627	.	+	0	Parent=FBgn0035411.1.mrna2;Target=FBgn0035411.1 3013 3150 +
Chr1	stalkie_big_nohaplotig	CDS	20482060	20482298	.	+	0	Parent=FBgn0035411.1.mrna2;Target=FBgn0035411.1 3151 3389 +
Chr1	stalkie_big_nohaplotig	CDS	20482409	20482484	.	+	1	Parent=FBgn0035411.1.mrna2;Target=FBgn0035411.1 3390 3465 +
Chr1	stalkie_big_nohaplotig	CDS	20482551	20482717	.	+	0	Parent=FBgn0035411.1.mrna2;Target=FBgn0035411.1 3466 3632 +
Chr1	stalkie_big_nohaplotig	CDS	20482872	20482979	.	+	1	Parent=FBgn0035411.1.mrna2;Target=FBgn0035411.1 3633 3740 +
Chr1	stalkie_big_nohaplotig	CDS	20486792	20487203	.	+	1	Parent=FBgn0035411.1.mrna2;Target=FBgn0035411.1 3741 4152 +
Chr1	gffcl	locus	20487346	20488573	.	+	.	ID=RLOC_00006342;geneIDs=comp148218_c0_seq1.path2,comp157166_c0_seq1.path1;transcripts=comp157166_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20487346	20488389	.	+	.	ID=comp157166_c0_seq1.mrna1;geneID=comp157166_c0_seq1.path1;Name=comp157166_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1034;mismatches=10;indels=1;unknowns=0;Target=comp157166_c0_seq1 1045 1 .;CDS_Target=comp157166_c0_seq1 372 238 .;locus=RLOC_00006342
Chr1	stalkie_big_nohaplotig	exon	20487346	20488389	98	+	.	Parent=comp157166_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	20487583	20487717	.	+	0	Parent=comp157166_c0_seq1.mrna1
Chr1	gffcl	locus	20489272	20489991	.	-	.	ID=RLOC_00006343;geneIDs=comp155275_c1_seq1.path1;transcripts=comp155275_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20489272	20489991	.	-	.	ID=comp155275_c1_seq1.mrna1;geneID=comp155275_c1_seq1.path1;Name=comp155275_c1_seq1;Dir=indeterminatecoverage=76.1;identity=98.5;matches=710;mismatches=10;indels=1;unknowns=0;Target=comp155275_c1_seq1 721 1 .;CDS_Target=comp155275_c1_seq1 92 3 .;locus=RLOC_00006343
Chr1	stalkie_big_nohaplotig	exon	20489272	20489991	98	-	.	Parent=comp155275_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	20489900	20489989	.	-	0	Parent=comp155275_c1_seq1.mrna1
Chr1	gffcl	locus	20512656	20515180	.	+	.	ID=RLOC_00006344;geneIDs=comp136264_c0_seq1.path1;transcripts=comp136264_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20512656	20515180	.	+	.	ID=comp136264_c0_seq1.mrna1;geneID=comp136264_c0_seq1.path1;Name=comp136264_c0_seq1;Dir=antisensecoverage=99.9;identity=99.9;matches=744;mismatches=1;indels=0;unknowns=0;Target=comp136264_c0_seq1 354 446 .;locus=RLOC_00006344
Chr1	stalkie_big_nohaplotig	exon	20512656	20513310	100	+	.	Parent=comp136264_c0_seq1.mrna1;Target=comp136264_c0_seq1 91 745 -
Chr1	stalkie_big_nohaplotig	exon	20515091	20515180	98	+	.	Parent=comp136264_c0_seq1.mrna1;Target=comp136264_c0_seq1 1 90 -
Chr1	stalkie_big_nohaplotig	CDS	20512955	20513047	.	+	0	Parent=comp136264_c0_seq1.mrna1
Chr1	gffcl	locus	20633840	20634543	.	-	.	ID=RLOC_00006345;geneIDs=comp150356_c0_seq1.path1;transcripts=comp150356_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20633840	20634543	.	-	.	ID=comp150356_c0_seq1.mrna1;geneID=comp150356_c0_seq1.path1;Name=comp150356_c0_seq1;Dir=sensecoverage=96.1;identity=100.0;matches=643;mismatches=0;indels=0;unknowns=0;Target=comp150356_c0_seq1 115 600 +;locus=RLOC_00006345
Chr1	stalkie_big_nohaplotig	exon	20633840	20634400	100	-	.	Parent=comp150356_c0_seq1.mrna1;Target=comp150356_c0_seq1 107 667 +
Chr1	stalkie_big_nohaplotig	exon	20634462	20634543	100	-	.	Parent=comp150356_c0_seq1.mrna1;Target=comp150356_c0_seq1 25 106 +
Chr1	stalkie_big_nohaplotig	CDS	20633907	20634392	.	-	0	Parent=comp150356_c0_seq1.mrna1
Chr1	gffcl	locus	20652278	20660373	.	-	.	ID=RLOC_00006346;geneIDs=FBgn0035453.1.path1,FBgn0035453.2.path1,FBgn0035453.2.path2;transcripts=FBgn0035453.2.mrna2,FBgn0035453.1.mrna1,FBgn0035453.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20652278	20660373	.	-	.	ID=FBgn0035453.2.mrna2;geneID=FBgn0035453.2.path2;Name=FBgn0035453.2;Dir=sensecoverage=74.5;identity=99.9;matches=763;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006346
Chr1	stalkie_big_nohaplotig	exon	20652278	20652350	100	-	.	Parent=FBgn0035453.2.mrna2;Target=FBgn0035453.2 954 1026 +
Chr1	stalkie_big_nohaplotig	exon	20652693	20652918	100	-	.	Parent=FBgn0035453.2.mrna2;Target=FBgn0035453.2 728 953 +
Chr1	stalkie_big_nohaplotig	exon	20653415	20653712	100	-	.	Parent=FBgn0035453.2.mrna2;Target=FBgn0035453.2 430 727 +
Chr1	stalkie_big_nohaplotig	exon	20660142	20660172	96	-	.	Parent=FBgn0035453.2.mrna2;Target=FBgn0035453.2 399 429 +
Chr1	stalkie_big_nohaplotig	exon	20660238	20660373	100	-	.	Parent=FBgn0035453.2.mrna2;Target=FBgn0035453.2 263 398 +
Chr1	stalkie_big_nohaplotig	CDS	20652278	20652350	.	-	0	Parent=FBgn0035453.2.mrna2;Target=FBgn0035453.2 954 1026 +
Chr1	stalkie_big_nohaplotig	CDS	20652693	20652918	.	-	1	Parent=FBgn0035453.2.mrna2;Target=FBgn0035453.2 728 953 +
Chr1	stalkie_big_nohaplotig	CDS	20653415	20653712	.	-	2	Parent=FBgn0035453.2.mrna2;Target=FBgn0035453.2 430 727 +
Chr1	stalkie_big_nohaplotig	CDS	20660142	20660172	.	-	0	Parent=FBgn0035453.2.mrna2;Target=FBgn0035453.2 399 429 +
Chr1	stalkie_big_nohaplotig	CDS	20660238	20660373	.	-	1	Parent=FBgn0035453.2.mrna2;Target=FBgn0035453.2 263 398 +
Chr1	stalkie_big_nohaplotig	mRNA	20652693	20655288	.	-	.	ID=FBgn0035453.1.mrna1;geneID=FBgn0035453.1.path1;Name=FBgn0035453.1;Dir=sensecoverage=84.5;identity=94.4;matches=919;mismatches=55;indels=0;unknowns=0;locus=RLOC_00006346
Chr1	stalkie_big_nohaplotig	exon	20652693	20652918	80	-	.	Parent=FBgn0035453.1.mrna1;Target=FBgn0035453.1 749 974 +
Chr1	stalkie_big_nohaplotig	exon	20653415	20653743	96	-	.	Parent=FBgn0035453.1.mrna1;Target=FBgn0035453.1 420 748 +
Chr1	stalkie_big_nohaplotig	exon	20653810	20653945	100	-	.	Parent=FBgn0035453.1.mrna1;Target=FBgn0035453.1 284 419 +
Chr1	stalkie_big_nohaplotig	exon	20654880	20655013	100	-	.	Parent=FBgn0035453.1.mrna1;Target=FBgn0035453.1 150 283 +
Chr1	stalkie_big_nohaplotig	exon	20655140	20655288	100	-	.	Parent=FBgn0035453.1.mrna1;Target=FBgn0035453.1 1 149 +
Chr1	stalkie_big_nohaplotig	CDS	20652695	20652918	.	-	2	Parent=FBgn0035453.1.mrna1;Target=FBgn0035453.1 749 972 +
Chr1	stalkie_big_nohaplotig	CDS	20653415	20653743	.	-	1	Parent=FBgn0035453.1.mrna1;Target=FBgn0035453.1 420 748 +
Chr1	stalkie_big_nohaplotig	CDS	20653810	20653945	.	-	2	Parent=FBgn0035453.1.mrna1;Target=FBgn0035453.1 284 419 +
Chr1	stalkie_big_nohaplotig	CDS	20654880	20655013	.	-	1	Parent=FBgn0035453.1.mrna1;Target=FBgn0035453.1 150 283 +
Chr1	stalkie_big_nohaplotig	CDS	20655140	20655288	.	-	0	Parent=FBgn0035453.1.mrna1;Target=FBgn0035453.1 1 149 +
Chr1	stalkie_big_nohaplotig	mRNA	20654880	20655255	.	-	.	ID=FBgn0035453.2.mrna1;geneID=FBgn0035453.2.path1;Name=FBgn0035453.2;Dir=indeterminatecoverage=25.5;identity=88.4;matches=168;mismatches=22;indels=0;unknowns=0;locus=RLOC_00006346
Chr1	stalkie_big_nohaplotig	exon	20654880	20654957	85	-	.	Parent=FBgn0035453.2.mrna1;Target=FBgn0035453.2 262 185 .
Chr1	stalkie_big_nohaplotig	exon	20655144	20655255	90	-	.	Parent=FBgn0035453.2.mrna1;Target=FBgn0035453.2 112 1 .
Chr1	stalkie_big_nohaplotig	CDS	20654880	20654957	.	-	2	Parent=FBgn0035453.2.mrna1;Target=FBgn0035453.2 262 185 .
Chr1	stalkie_big_nohaplotig	CDS	20655144	20655255	.	-	0	Parent=FBgn0035453.2.mrna1;Target=FBgn0035453.2 112 1 .
Chr1	gffcl	locus	20657418	20658957	.	+	.	ID=RLOC_00006347;geneIDs=comp151170_c1_seq1.path2;transcripts=comp151170_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	20657418	20658957	.	+	.	ID=comp151170_c1_seq1.mrna2;geneID=comp151170_c1_seq1.path2;Name=comp151170_c1_seq1;Dir=indeterminatecoverage=77.0;identity=90.5;matches=1348;mismatches=91;indels=51;unknowns=0;Target=comp151170_c1_seq1 1781 1668 .;locus=RLOC_00006347
Chr1	stalkie_big_nohaplotig	exon	20657418	20658161	96	+	.	Parent=comp151170_c1_seq1.mrna2;Target=comp151170_c1_seq1 1174 430 .
Chr1	stalkie_big_nohaplotig	exon	20658213	20658957	84	+	.	Parent=comp151170_c1_seq1.mrna2;Target=comp151170_c1_seq1 1869 1175 .
Chr1	stalkie_big_nohaplotig	CDS	20658747	20658869	.	+	0	Parent=comp151170_c1_seq1.mrna2
Chr1	gffcl	locus	20684033	20684365	.	+	.	ID=RLOC_00006348;geneIDs=comp113767_c0_seq1.path1;transcripts=comp113767_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20684033	20684365	.	+	.	ID=comp113767_c0_seq1.mrna1;geneID=comp113767_c0_seq1.path1;Name=comp113767_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.1;matches=330;mismatches=3;indels=0;unknowns=0;Target=comp113767_c0_seq1 337 5 .;CDS_Target=comp113767_c0_seq1 72 7 .;locus=RLOC_00006348
Chr1	stalkie_big_nohaplotig	exon	20684033	20684365	99	+	.	Parent=comp113767_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	20684035	20684100	.	+	0	Parent=comp113767_c0_seq1.mrna1
Chr1	gffcl	locus	20684396	20685784	.	+	.	ID=RLOC_00006349;geneIDs=comp158031_c1_seq1.path1;transcripts=comp158031_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20684396	20685784	.	+	.	ID=comp158031_c1_seq1.mrna1;geneID=comp158031_c1_seq1.path1;Name=comp158031_c1_seq1;Dir=indeterminatecoverage=100.0;identity=95.0;matches=1319;mismatches=58;indels=12;unknowns=0;Target=comp158031_c1_seq1 1377 1 .;CDS_Target=comp158031_c1_seq1 668 534 .;locus=RLOC_00006349
Chr1	stalkie_big_nohaplotig	exon	20684396	20685784	94	+	.	Parent=comp158031_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	20684938	20685072	.	+	0	Parent=comp158031_c1_seq1.mrna1
Chr1	gffcl	locus	20718329	20720664	.	-	.	ID=RLOC_00006350;geneIDs=comp144202_c1_seq1.path2;transcripts=comp144202_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	20718329	20720664	.	-	.	ID=comp144202_c1_seq1.mrna2;geneID=comp144202_c1_seq1.path2;Name=comp144202_c1_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=434;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006350
Chr1	stalkie_big_nohaplotig	exon	20718329	20718351	100	-	.	Parent=comp144202_c1_seq1.mrna2;Target=comp144202_c1_seq1 1 23 -
Chr1	stalkie_big_nohaplotig	exon	20720254	20720664	100	-	.	Parent=comp144202_c1_seq1.mrna2;Target=comp144202_c1_seq1 24 434 -
Chr1	stalkie_big_nohaplotig	CDS	20718331	20718351	.	-	0	Parent=comp144202_c1_seq1.mrna2;Target=comp144202_c1_seq1 3 23 .
Chr1	stalkie_big_nohaplotig	CDS	20720254	20720664	.	-	0	Parent=comp144202_c1_seq1.mrna2;Target=comp144202_c1_seq1 24 434 .
Chr1	gffcl	locus	20780473	20780861	.	-	.	ID=RLOC_00006351;geneIDs=comp622541_c0_seq1.path1;transcripts=comp622541_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20780473	20780861	.	-	.	ID=comp622541_c0_seq1.mrna1;geneID=comp622541_c0_seq1.path1;Name=comp622541_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=389;mismatches=0;indels=0;unknowns=0;Target=comp622541_c0_seq1 389 1 .;CDS_Target=comp622541_c0_seq1 266 150 .;locus=RLOC_00006351
Chr1	stalkie_big_nohaplotig	exon	20780473	20780861	100	-	.	Parent=comp622541_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	20780596	20780712	.	-	0	Parent=comp622541_c0_seq1.mrna1
Chr1	gffcl	locus	20807214	20808272	.	-	.	ID=RLOC_00006352;geneIDs=ORF1566.path1;transcripts=ORF1566.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20807214	20808272	.	-	.	ID=ORF1566.mrna1;geneID=ORF1566.path1;Name=ORF1566;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1059;mismatches=0;indels=0;unknowns=0;Target=ORF1566 1059 1 .;locus=RLOC_00006352
Chr1	stalkie_big_nohaplotig	exon	20807214	20808272	100	-	.	Parent=ORF1566.mrna1
Chr1	stalkie_big_nohaplotig	CDS	20807214	20808272	.	-	0	Parent=ORF1566.mrna1
Chr1	gffcl	locus	20816941	20822064	.	-	.	ID=RLOC_00006353;geneIDs=comp139245_c1_seq1.path1;transcripts=comp139245_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20816941	20822064	.	-	.	ID=comp139245_c1_seq1.mrna1;geneID=comp139245_c1_seq1.path1;Name=comp139245_c1_seq1;Dir=sensecoverage=100.0;identity=98.2;matches=608;mismatches=8;indels=3;unknowns=0;Target=comp139245_c1_seq1 428 553 +;locus=RLOC_00006353
Chr1	stalkie_big_nohaplotig	exon	20816941	20817333	99	-	.	Parent=comp139245_c1_seq1.mrna1;Target=comp139245_c1_seq1 227 619 +
Chr1	stalkie_big_nohaplotig	exon	20821842	20822064	95	-	.	Parent=comp139245_c1_seq1.mrna1;Target=comp139245_c1_seq1 1 226 +
Chr1	stalkie_big_nohaplotig	CDS	20817007	20817132	.	-	0	Parent=comp139245_c1_seq1.mrna1
Chr1	gffcl	locus	20846885	20873653	.	-	.	ID=RLOC_00006354;geneIDs=FBgn0002526.1.path1;transcripts=FBgn0002526.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20846885	20873653	.	-	.	ID=FBgn0002526.1.mrna1;geneID=FBgn0002526.1.path1;Name=FBgn0002526.1;Dir=sensecoverage=100.0;identity=99.4;matches=11170;mismatches=62;indels=0;unknowns=0;locus=RLOC_00006354
Chr1	stalkie_big_nohaplotig	exon	20846885	20848353	100	-	.	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 9764 11232 +
Chr1	stalkie_big_nohaplotig	exon	20848415	20848632	100	-	.	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 9546 9763 +
Chr1	stalkie_big_nohaplotig	exon	20848801	20854382	99	-	.	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 3964 9545 +
Chr1	stalkie_big_nohaplotig	exon	20854445	20854670	99	-	.	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 3738 3963 +
Chr1	stalkie_big_nohaplotig	exon	20854730	20855010	100	-	.	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 3457 3737 +
Chr1	stalkie_big_nohaplotig	exon	20855172	20855562	99	-	.	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 3066 3456 +
Chr1	stalkie_big_nohaplotig	exon	20855631	20855894	99	-	.	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 2802 3065 +
Chr1	stalkie_big_nohaplotig	exon	20855951	20856803	99	-	.	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 1949 2801 +
Chr1	stalkie_big_nohaplotig	exon	20857775	20858047	98	-	.	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 1676 1948 +
Chr1	stalkie_big_nohaplotig	exon	20858107	20858244	98	-	.	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 1538 1675 +
Chr1	stalkie_big_nohaplotig	exon	20858306	20858578	99	-	.	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 1265 1537 +
Chr1	stalkie_big_nohaplotig	exon	20858637	20858846	99	-	.	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 1055 1264 +
Chr1	stalkie_big_nohaplotig	exon	20858948	20859572	99	-	.	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 430 1054 +
Chr1	stalkie_big_nohaplotig	exon	20867124	20867270	100	-	.	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 283 429 +
Chr1	stalkie_big_nohaplotig	exon	20873372	20873653	98	-	.	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 1 282 +
Chr1	stalkie_big_nohaplotig	CDS	20846885	20848353	.	-	2	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 9764 11232 +
Chr1	stalkie_big_nohaplotig	CDS	20848415	20848632	.	-	1	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 9546 9763 +
Chr1	stalkie_big_nohaplotig	CDS	20848801	20854382	.	-	0	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 3964 9545 +
Chr1	stalkie_big_nohaplotig	CDS	20854445	20854670	.	-	1	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 3738 3963 +
Chr1	stalkie_big_nohaplotig	CDS	20854730	20855010	.	-	0	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 3457 3737 +
Chr1	stalkie_big_nohaplotig	CDS	20855172	20855562	.	-	1	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 3066 3456 +
Chr1	stalkie_big_nohaplotig	CDS	20855631	20855894	.	-	1	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 2802 3065 +
Chr1	stalkie_big_nohaplotig	CDS	20855951	20856803	.	-	2	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 1949 2801 +
Chr1	stalkie_big_nohaplotig	CDS	20857775	20858047	.	-	2	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 1676 1948 +
Chr1	stalkie_big_nohaplotig	CDS	20858107	20858244	.	-	2	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 1538 1675 +
Chr1	stalkie_big_nohaplotig	CDS	20858306	20858578	.	-	2	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 1265 1537 +
Chr1	stalkie_big_nohaplotig	CDS	20858637	20858846	.	-	2	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 1055 1264 +
Chr1	stalkie_big_nohaplotig	CDS	20858948	20859572	.	-	0	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 430 1054 +
Chr1	stalkie_big_nohaplotig	CDS	20867124	20867270	.	-	0	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 283 429 +
Chr1	stalkie_big_nohaplotig	CDS	20873372	20873653	.	-	0	Parent=FBgn0002526.1.mrna1;Target=FBgn0002526.1 1 282 +
Chr1	gffcl	locus	20883500	20884450	.	-	.	ID=RLOC_00006355;geneIDs=comp143064_c0_seq1.path1;transcripts=comp143064_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20883500	20884450	.	-	.	ID=comp143064_c0_seq1.mrna1;geneID=comp143064_c0_seq1.path1;Name=comp143064_c0_seq1;Dir=sensecoverage=100.0;identity=96.5;matches=782;mismatches=13;indels=15;unknowns=0;locus=RLOC_00006355
Chr1	stalkie_big_nohaplotig	exon	20883500	20883792	93	-	.	Parent=comp143064_c0_seq1.mrna1;Target=comp143064_c0_seq1 507 806 +
Chr1	stalkie_big_nohaplotig	exon	20883945	20884450	98	-	.	Parent=comp143064_c0_seq1.mrna1;Target=comp143064_c0_seq1 1 506 +
Chr1	stalkie_big_nohaplotig	CDS	20883701	20883792	.	-	2	Parent=comp143064_c0_seq1.mrna1;Target=comp143064_c0_seq1 507 598 +
Chr1	stalkie_big_nohaplotig	CDS	20883945	20883978	.	-	0	Parent=comp143064_c0_seq1.mrna1;Target=comp143064_c0_seq1 473 506 +
Chr1	gffcl	locus	20893502	20895780	.	-	.	ID=RLOC_00006356;geneIDs=ORF2100.path1;transcripts=ORF2100.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20893502	20895780	.	-	.	ID=ORF2100.mrna1;geneID=ORF2100.path1;Name=ORF2100;Dir=sensecoverage=99.8;identity=97.7;matches=895;mismatches=21;indels=0;unknowns=0;locus=RLOC_00006356
Chr1	stalkie_big_nohaplotig	exon	20893502	20894011	97	-	.	Parent=ORF2100.mrna1;Target=ORF2100 409 918 +
Chr1	stalkie_big_nohaplotig	exon	20895264	20895478	97	-	.	Parent=ORF2100.mrna1;Target=ORF2100 194 408 +
Chr1	stalkie_big_nohaplotig	exon	20895533	20895610	100	-	.	Parent=ORF2100.mrna1;Target=ORF2100 116 193 +
Chr1	stalkie_big_nohaplotig	exon	20895668	20895780	97	-	.	Parent=ORF2100.mrna1;Target=ORF2100 3 115 +
Chr1	stalkie_big_nohaplotig	CDS	20893502	20894011	.	-	0	Parent=ORF2100.mrna1;Target=ORF2100 409 918 +
Chr1	stalkie_big_nohaplotig	CDS	20895264	20895478	.	-	2	Parent=ORF2100.mrna1;Target=ORF2100 194 408 +
Chr1	stalkie_big_nohaplotig	CDS	20895533	20895610	.	-	2	Parent=ORF2100.mrna1;Target=ORF2100 116 193 +
Chr1	stalkie_big_nohaplotig	CDS	20895668	20895779	.	-	0	Parent=ORF2100.mrna1;Target=ORF2100 4 115 +
Chr1	gffcl	locus	20903597	20906219	.	+	.	ID=RLOC_00006357;geneIDs=comp131998_c0_seq1.path1;transcripts=comp131998_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20903597	20906219	.	+	.	ID=comp131998_c0_seq1.mrna1;geneID=comp131998_c0_seq1.path1;Name=comp131998_c0_seq1;Dir=antisensecoverage=94.5;identity=99.8;matches=412;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006357
Chr1	stalkie_big_nohaplotig	exon	20903597	20903695	98	+	.	Parent=comp131998_c0_seq1.mrna1;Target=comp131998_c0_seq1 324 422 -
Chr1	stalkie_big_nohaplotig	exon	20903773	20903928	100	+	.	Parent=comp131998_c0_seq1.mrna1;Target=comp131998_c0_seq1 168 323 -
Chr1	stalkie_big_nohaplotig	exon	20906062	20906219	100	+	.	Parent=comp131998_c0_seq1.mrna1;Target=comp131998_c0_seq1 10 167 -
Chr1	stalkie_big_nohaplotig	CDS	20903599	20903695	.	+	0	Parent=comp131998_c0_seq1.mrna1;Target=comp131998_c0_seq1 324 420 .
Chr1	stalkie_big_nohaplotig	CDS	20903773	20903928	.	+	2	Parent=comp131998_c0_seq1.mrna1;Target=comp131998_c0_seq1 168 323 .
Chr1	stalkie_big_nohaplotig	CDS	20906062	20906120	.	+	2	Parent=comp131998_c0_seq1.mrna1;Target=comp131998_c0_seq1 109 167 .
Chr1	gffcl	locus	20912372	20913067	.	-	.	ID=RLOC_00006358;geneIDs=comp888987_c0_seq1.path1;transcripts=comp888987_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20912372	20913067	.	-	.	ID=comp888987_c0_seq1.mrna1;geneID=comp888987_c0_seq1.path1;Name=comp888987_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=696;mismatches=0;indels=0;unknowns=0;Target=comp888987_c0_seq1 696 1 .;CDS_Target=comp888987_c0_seq1 96 1 .;locus=RLOC_00006358
Chr1	stalkie_big_nohaplotig	exon	20912372	20913067	100	-	.	Parent=comp888987_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	20912972	20913067	.	-	0	Parent=comp888987_c0_seq1.mrna1
Chr1	gffcl	locus	20917322	20918115	.	+	.	ID=RLOC_00006359;geneIDs=comp150392_c0_seq1.path1;transcripts=comp150392_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20917322	20918115	.	+	.	ID=comp150392_c0_seq1.mrna1;geneID=comp150392_c0_seq1.path1;Name=comp150392_c0_seq1;Dir=sensecoverage=99.7;identity=100.0;matches=656;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006359
Chr1	stalkie_big_nohaplotig	exon	20917322	20917585	100	+	.	Parent=comp150392_c0_seq1.mrna1;Target=comp150392_c0_seq1 1 264 +
Chr1	stalkie_big_nohaplotig	exon	20917651	20917806	100	+	.	Parent=comp150392_c0_seq1.mrna1;Target=comp150392_c0_seq1 265 420 +
Chr1	stalkie_big_nohaplotig	exon	20917880	20918115	100	+	.	Parent=comp150392_c0_seq1.mrna1;Target=comp150392_c0_seq1 421 656 +
Chr1	stalkie_big_nohaplotig	CDS	20917537	20917585	.	+	0	Parent=comp150392_c0_seq1.mrna1;Target=comp150392_c0_seq1 216 264 +
Chr1	stalkie_big_nohaplotig	CDS	20917651	20917806	.	+	2	Parent=comp150392_c0_seq1.mrna1;Target=comp150392_c0_seq1 265 420 +
Chr1	stalkie_big_nohaplotig	CDS	20917880	20918058	.	+	2	Parent=comp150392_c0_seq1.mrna1;Target=comp150392_c0_seq1 421 599 +
Chr1	gffcl	locus	20922002	20924149	.	-	.	ID=RLOC_00006360;geneIDs=comp153341_c2_seq1.path1;transcripts=comp153341_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20922002	20924149	.	-	.	ID=comp153341_c2_seq1.mrna1;geneID=comp153341_c2_seq1.path1;Name=comp153341_c2_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=1227;mismatches=2;indels=2;unknowns=0;Target=comp153341_c2_seq1 112 225 +;locus=RLOC_00006360
Chr1	stalkie_big_nohaplotig	exon	20922002	20922942	99	-	.	Parent=comp153341_c2_seq1.mrna1;Target=comp153341_c2_seq1 290 1231 +
Chr1	stalkie_big_nohaplotig	exon	20923862	20924149	99	-	.	Parent=comp153341_c2_seq1.mrna1;Target=comp153341_c2_seq1 1 289 +
Chr1	stalkie_big_nohaplotig	CDS	20923926	20924038	.	-	0	Parent=comp153341_c2_seq1.mrna1
Chr1	gffcl	locus	20925516	20926953	.	+	.	ID=RLOC_00006361;geneIDs=FBgn0004465.1.path1;transcripts=FBgn0004465.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20925516	20926953	.	+	.	ID=FBgn0004465.1.mrna1;geneID=FBgn0004465.1.path1;Name=FBgn0004465.1;Dir=sensecoverage=100.0;identity=99.0;matches=1244;mismatches=10;indels=2;unknowns=0;Target=FBgn0004465.1 3 11 +;locus=RLOC_00006361
Chr1	stalkie_big_nohaplotig	exon	20925516	20926257	98	+	.	Parent=FBgn0004465.1.mrna1;Target=FBgn0004465.1 1 740 +
Chr1	stalkie_big_nohaplotig	exon	20926317	20926495	99	+	.	Parent=FBgn0004465.1.mrna1;Target=FBgn0004465.1 741 919 +
Chr1	stalkie_big_nohaplotig	exon	20926556	20926783	99	+	.	Parent=FBgn0004465.1.mrna1;Target=FBgn0004465.1 920 1147 +
Chr1	stalkie_big_nohaplotig	exon	20926847	20926953	100	+	.	Parent=FBgn0004465.1.mrna1;Target=FBgn0004465.1 1148 1254 +
Chr1	stalkie_big_nohaplotig	CDS	20925518	20925528	.	+	0	Parent=FBgn0004465.1.mrna1
Chr1	gffcl	locus	20928581	20929375	.	+	.	ID=RLOC_00006362;geneIDs=FBgn0002284.2.path1;transcripts=FBgn0002284.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20928581	20929375	.	+	.	ID=FBgn0002284.2.mrna1;geneID=FBgn0002284.2.path1;Name=FBgn0002284.2;Dir=sensecoverage=100.0;identity=99.0;matches=719;mismatches=7;indels=0;unknowns=0;locus=RLOC_00006362
Chr1	stalkie_big_nohaplotig	exon	20928581	20928696	100	+	.	Parent=FBgn0002284.2.mrna1;Target=FBgn0002284.2 1 116 +
Chr1	stalkie_big_nohaplotig	exon	20928766	20929375	98	+	.	Parent=FBgn0002284.2.mrna1;Target=FBgn0002284.2 117 726 +
Chr1	stalkie_big_nohaplotig	CDS	20928581	20928696	.	+	0	Parent=FBgn0002284.2.mrna1;Target=FBgn0002284.2 1 116 +
Chr1	stalkie_big_nohaplotig	CDS	20928766	20929375	.	+	1	Parent=FBgn0002284.2.mrna1;Target=FBgn0002284.2 117 726 +
Chr1	gffcl	locus	20933038	20933401	.	+	.	ID=RLOC_00006363;geneIDs=comp180345_c0_seq1.path1;transcripts=comp180345_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20933038	20933401	.	+	.	ID=comp180345_c0_seq1.mrna1;geneID=comp180345_c0_seq1.path1;Name=comp180345_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=360;mismatches=3;indels=1;unknowns=0;Target=comp180345_c0_seq1 363 1 .;CDS_Target=comp180345_c0_seq1 121 2 .;locus=RLOC_00006363
Chr1	stalkie_big_nohaplotig	exon	20933038	20933401	98	+	.	Parent=comp180345_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	20933039	20933158	.	+	0	Parent=comp180345_c0_seq1.mrna1
Chr1	gffcl	locus	20934922	20937453	.	.	.	ID=RLOC_00006364;geneIDs=comp146782_c0_seq1.path1,comp157782_c0_seq1.path1;transcripts=comp157782_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20934922	20936920	.	+	.	ID=comp157782_c0_seq1.mrna1;geneID=comp157782_c0_seq1.path1;Name=comp157782_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.7;matches=1978;mismatches=21;indels=111;unknowns=0;Target=comp157782_c0_seq1 2110 1 .;CDS_Target=comp157782_c0_seq1 404 315 .;locus=RLOC_00006364
Chr1	stalkie_big_nohaplotig	exon	20934922	20936920	93	+	.	Parent=comp157782_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	20935232	20935321	.	+	0	Parent=comp157782_c0_seq1.mrna1
Chr1	gffcl	locus	20938023	20938798	.	-	.	ID=RLOC_00006365;geneIDs=FBgn0017572.1.path1;transcripts=FBgn0017572.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20938023	20938798	.	-	.	ID=FBgn0017572.1.mrna1;geneID=FBgn0017572.1.path1;Name=FBgn0017572.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=774;mismatches=2;indels=1;unknowns=0;Target=FBgn0017572.1 777 1 .;CDS_Target=FBgn0017572.1 59 3 .;locus=RLOC_00006365
Chr1	stalkie_big_nohaplotig	exon	20938023	20938798	99	-	.	Parent=FBgn0017572.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	20938741	20938796	.	-	0	Parent=FBgn0017572.1.mrna1
Chr1	gffcl	locus	20942906	20943397	.	+	.	ID=RLOC_00006366;geneIDs=comp146042_c0_seq1.path1;transcripts=comp146042_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20942906	20943397	.	+	.	ID=comp146042_c0_seq1.mrna1;geneID=comp146042_c0_seq1.path1;Name=comp146042_c0_seq1;Dir=indeterminatecoverage=95.7;identity=99.0;matches=488;mismatches=3;indels=2;unknowns=0;Target=comp146042_c0_seq1 492 1 .;CDS_Target=comp146042_c0_seq1 50 3 .;locus=RLOC_00006366
Chr1	stalkie_big_nohaplotig	exon	20942906	20943397	98	+	.	Parent=comp146042_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	20942908	20942955	.	+	0	Parent=comp146042_c0_seq1.mrna1
Chr1	gffcl	locus	20944404	21018859	.	-	.	ID=RLOC_00006367;geneIDs=FBgn0000017.1.path1;transcripts=FBgn0000017.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	20944404	21018859	.	-	.	ID=FBgn0000017.1.mrna1;geneID=FBgn0000017.1.path1;Name=FBgn0000017.1;Dir=sensecoverage=100.0;identity=99.4;matches=5032;mismatches=29;indels=0;unknowns=0;locus=RLOC_00006367
Chr1	stalkie_big_nohaplotig	exon	20944404	20947099	99	-	.	Parent=FBgn0000017.1.mrna1;Target=FBgn0000017.1 2366 5061 +
Chr1	stalkie_big_nohaplotig	exon	20949161	20949237	100	-	.	Parent=FBgn0000017.1.mrna1;Target=FBgn0000017.1 2289 2365 +
Chr1	stalkie_big_nohaplotig	exon	20949317	20949437	100	-	.	Parent=FBgn0000017.1.mrna1;Target=FBgn0000017.1 2168 2288 +
Chr1	stalkie_big_nohaplotig	exon	20949509	20949686	100	-	.	Parent=FBgn0000017.1.mrna1;Target=FBgn0000017.1 1990 2167 +
Chr1	stalkie_big_nohaplotig	exon	20949924	20950510	99	-	.	Parent=FBgn0000017.1.mrna1;Target=FBgn0000017.1 1403 1989 +
Chr1	stalkie_big_nohaplotig	exon	20951664	20952079	99	-	.	Parent=FBgn0000017.1.mrna1;Target=FBgn0000017.1 987 1402 +
Chr1	stalkie_big_nohaplotig	exon	20952144	20952669	99	-	.	Parent=FBgn0000017.1.mrna1;Target=FBgn0000017.1 461 986 +
Chr1	stalkie_big_nohaplotig	exon	20966839	20966892	100	-	.	Parent=FBgn0000017.1.mrna1;Target=FBgn0000017.1 407 460 +
Chr1	stalkie_big_nohaplotig	exon	21018454	21018859	99	-	.	Parent=FBgn0000017.1.mrna1;Target=FBgn0000017.1 1 406 +
Chr1	stalkie_big_nohaplotig	CDS	20944404	20947099	.	-	2	Parent=FBgn0000017.1.mrna1;Target=FBgn0000017.1 2366 5061 +
Chr1	stalkie_big_nohaplotig	CDS	20949161	20949237	.	-	1	Parent=FBgn0000017.1.mrna1;Target=FBgn0000017.1 2289 2365 +
Chr1	stalkie_big_nohaplotig	CDS	20949317	20949437	.	-	2	Parent=FBgn0000017.1.mrna1;Target=FBgn0000017.1 2168 2288 +
Chr1	stalkie_big_nohaplotig	CDS	20949509	20949686	.	-	0	Parent=FBgn0000017.1.mrna1;Target=FBgn0000017.1 1990 2167 +
Chr1	stalkie_big_nohaplotig	CDS	20949924	20950510	.	-	2	Parent=FBgn0000017.1.mrna1;Target=FBgn0000017.1 1403 1989 +
Chr1	stalkie_big_nohaplotig	CDS	20951664	20952079	.	-	1	Parent=FBgn0000017.1.mrna1;Target=FBgn0000017.1 987 1402 +
Chr1	stalkie_big_nohaplotig	CDS	20952144	20952669	.	-	2	Parent=FBgn0000017.1.mrna1;Target=FBgn0000017.1 461 986 +
Chr1	stalkie_big_nohaplotig	CDS	20966839	20966892	.	-	2	Parent=FBgn0000017.1.mrna1;Target=FBgn0000017.1 407 460 +
Chr1	stalkie_big_nohaplotig	CDS	21018454	21018859	.	-	0	Parent=FBgn0000017.1.mrna1;Target=FBgn0000017.1 1 406 +
Chr1	gffcl	locus	21013781	21013820	.	+	.	ID=RLOC_00006368;geneIDs=comp147662_c0_seq1.path2;transcripts=comp147662_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	21013781	21013820	.	+	.	ID=comp147662_c0_seq1.mrna2;geneID=comp147662_c0_seq1.path2;Name=comp147662_c0_seq1;Dir=indeterminatecoverage=5.1;identity=100.0;matches=40;mismatches=0;indels=0;unknowns=0;Target=comp147662_c0_seq1 789 750 .;locus=RLOC_00006368
Chr1	stalkie_big_nohaplotig	exon	21013781	21013820	100	+	.	Parent=comp147662_c0_seq1.mrna2
Chr1	gffcl	locus	21022229	21025410	.	+	.	ID=RLOC_00006369;geneIDs=FBgn0262732.1.path1;transcripts=FBgn0262732.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21022229	21025410	.	+	.	ID=FBgn0262732.1.mrna1;geneID=FBgn0262732.1.path1;Name=FBgn0262732.1;Dir=sensecoverage=100.0;identity=99.8;matches=437;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006369
Chr1	stalkie_big_nohaplotig	exon	21022229	21022355	100	+	.	Parent=FBgn0262732.1.mrna1;Target=FBgn0262732.1 1 127 +
Chr1	stalkie_big_nohaplotig	exon	21025026	21025186	99	+	.	Parent=FBgn0262732.1.mrna1;Target=FBgn0262732.1 128 288 +
Chr1	stalkie_big_nohaplotig	exon	21025261	21025410	100	+	.	Parent=FBgn0262732.1.mrna1;Target=FBgn0262732.1 289 438 +
Chr1	stalkie_big_nohaplotig	CDS	21022229	21022355	.	+	0	Parent=FBgn0262732.1.mrna1;Target=FBgn0262732.1 1 127 +
Chr1	stalkie_big_nohaplotig	CDS	21025026	21025186	.	+	2	Parent=FBgn0262732.1.mrna1;Target=FBgn0262732.1 128 288 +
Chr1	stalkie_big_nohaplotig	CDS	21025261	21025410	.	+	0	Parent=FBgn0262732.1.mrna1;Target=FBgn0262732.1 289 438 +
Chr1	gffcl	locus	21023235	21023900	.	+	.	ID=RLOC_00006370;geneIDs=comp150460_c0_seq1.path1;transcripts=comp150460_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21023235	21023900	.	+	.	ID=comp150460_c0_seq1.mrna1;geneID=comp150460_c0_seq1.path1;Name=comp150460_c0_seq1;Dir=indeterminatecoverage=95.0;identity=86.4;matches=633;mismatches=26;indels=74;unknowns=0;Target=comp150460_c0_seq1 764 39 .;CDS_Target=comp150460_c0_seq1 621 481 .;locus=RLOC_00006370
Chr1	stalkie_big_nohaplotig	exon	21023235	21023900	86	+	.	Parent=comp150460_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	21023619	21023756	.	+	0	Parent=comp150460_c0_seq1.mrna1
Chr1	gffcl	locus	21026329	21026784	.	+	.	ID=RLOC_00006371;geneIDs=comp144106_c0_seq1.path1;transcripts=comp144106_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21026329	21026784	.	+	.	ID=comp144106_c0_seq1.mrna1;geneID=comp144106_c0_seq1.path1;Name=comp144106_c0_seq1;Dir=indeterminatecoverage=96.8;identity=99.1;matches=452;mismatches=4;indels=0;unknowns=0;Target=comp144106_c0_seq1 456 1 .;CDS_Target=comp144106_c0_seq1 78 1 .;locus=RLOC_00006371
Chr1	stalkie_big_nohaplotig	exon	21026329	21026784	99	+	.	Parent=comp144106_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	21026329	21026406	.	+	0	Parent=comp144106_c0_seq1.mrna1
Chr1	gffcl	locus	21030099	21068607	.	-	.	ID=RLOC_00006372;geneIDs=comp114609_c0_seq1.path1,comp150140_c0_seq1.path1;transcripts=comp114609_c0_seq1.mrna1,comp150140_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21030099	21068607	.	-	.	ID=comp114609_c0_seq1.mrna1;geneID=comp114609_c0_seq1.path1;Name=comp114609_c0_seq1;Dir=indeterminatecoverage=82.5;identity=93.0;matches=305;mismatches=10;indels=13;unknowns=0;locus=RLOC_00006372
Chr1	stalkie_big_nohaplotig	exon	21030099	21030380	92	-	.	Parent=comp114609_c0_seq1.mrna1;Target=comp114609_c0_seq1 394 106 .
Chr1	stalkie_big_nohaplotig	exon	21035144	21035148	100	-	.	Parent=comp114609_c0_seq1.mrna1;Target=comp114609_c0_seq1 105 101 .
Chr1	stalkie_big_nohaplotig	exon	21041037	21041044	100	-	.	Parent=comp114609_c0_seq1.mrna1;Target=comp114609_c0_seq1 99 92 .
Chr1	stalkie_big_nohaplotig	exon	21043630	21043633	100	-	.	Parent=comp114609_c0_seq1.mrna1;Target=comp114609_c0_seq1 91 88 .
Chr1	stalkie_big_nohaplotig	exon	21051746	21051750	100	-	.	Parent=comp114609_c0_seq1.mrna1;Target=comp114609_c0_seq1 87 83 .
Chr1	stalkie_big_nohaplotig	exon	21063199	21063206	100	-	.	Parent=comp114609_c0_seq1.mrna1;Target=comp114609_c0_seq1 82 75 .
Chr1	stalkie_big_nohaplotig	exon	21068604	21068607	100	-	.	Parent=comp114609_c0_seq1.mrna1;Target=comp114609_c0_seq1 74 71 .
Chr1	stalkie_big_nohaplotig	CDS	21030341	21030380	.	-	2	Parent=comp114609_c0_seq1.mrna1;Target=comp114609_c0_seq1 145 106 .
Chr1	stalkie_big_nohaplotig	CDS	21035144	21035148	.	-	1	Parent=comp114609_c0_seq1.mrna1;Target=comp114609_c0_seq1 105 101 .
Chr1	stalkie_big_nohaplotig	CDS	21041037	21041044	.	-	0	Parent=comp114609_c0_seq1.mrna1;Target=comp114609_c0_seq1 99 92 .
Chr1	stalkie_big_nohaplotig	CDS	21043630	21043633	.	-	1	Parent=comp114609_c0_seq1.mrna1;Target=comp114609_c0_seq1 91 88 .
Chr1	stalkie_big_nohaplotig	CDS	21051746	21051750	.	-	0	Parent=comp114609_c0_seq1.mrna1;Target=comp114609_c0_seq1 87 83 .
Chr1	stalkie_big_nohaplotig	CDS	21063199	21063206	.	-	2	Parent=comp114609_c0_seq1.mrna1;Target=comp114609_c0_seq1 82 75 .
Chr1	stalkie_big_nohaplotig	CDS	21068604	21068607	.	-	0	Parent=comp114609_c0_seq1.mrna1;Target=comp114609_c0_seq1 74 71 .
Chr1	stalkie_big_nohaplotig	mRNA	21034900	21035417	.	-	.	ID=comp150140_c0_seq1.mrna1;geneID=comp150140_c0_seq1.path1;Name=comp150140_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=518;mismatches=0;indels=0;unknowns=0;Target=comp150140_c0_seq1 518 1 .;CDS_Target=comp150140_c0_seq1 132 61 .;locus=RLOC_00006372
Chr1	stalkie_big_nohaplotig	exon	21034900	21035417	100	-	.	Parent=comp150140_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	21035286	21035357	.	-	0	Parent=comp150140_c0_seq1.mrna1
Chr1	gffcl	locus	21032208	21032565	.	+	.	ID=RLOC_00006373;geneIDs=comp135232_c0_seq1.path1;transcripts=comp135232_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21032208	21032565	.	+	.	ID=comp135232_c0_seq1.mrna1;geneID=comp135232_c0_seq1.path1;Name=comp135232_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=357;mismatches=1;indels=0;unknowns=0;Target=comp135232_c0_seq1 358 1 .;CDS_Target=comp135232_c0_seq1 357 289 .;locus=RLOC_00006373
Chr1	stalkie_big_nohaplotig	exon	21032208	21032565	99	+	.	Parent=comp135232_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	21032496	21032564	.	+	0	Parent=comp135232_c0_seq1.mrna1
Chr1	gffcl	locus	21033422	21034267	.	-	.	ID=RLOC_00006374;geneIDs=comp144201_c0_seq1.path1,comp150163_c0_seq1.path1;transcripts=comp150163_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21033753	21034267	.	-	.	ID=comp150163_c0_seq1.mrna1;geneID=comp150163_c0_seq1.path1;Name=comp150163_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=515;mismatches=0;indels=0;unknowns=0;Target=comp150163_c0_seq1 515 1 .;CDS_Target=comp150163_c0_seq1 220 104 .;locus=RLOC_00006374
Chr1	stalkie_big_nohaplotig	exon	21033753	21034267	100	-	.	Parent=comp150163_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	21034048	21034164	.	-	0	Parent=comp150163_c0_seq1.mrna1
Chr1	gffcl	locus	21035730	21036124	.	+	.	ID=RLOC_00006375;geneIDs=comp410968_c0_seq1.path1;transcripts=comp410968_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21035730	21036124	.	+	.	ID=comp410968_c0_seq1.mrna1;geneID=comp410968_c0_seq1.path1;Name=comp410968_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=395;mismatches=0;indels=0;unknowns=0;Target=comp410968_c0_seq1 395 1 .;CDS_Target=comp410968_c0_seq1 93 1 .;locus=RLOC_00006375
Chr1	stalkie_big_nohaplotig	exon	21035730	21036124	100	+	.	Parent=comp410968_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	21035730	21035822	.	+	0	Parent=comp410968_c0_seq1.mrna1
Chr1	gffcl	locus	21036622	21074154	.	-	.	ID=RLOC_00006376;geneIDs=FBgn0260960.1.path1;transcripts=FBgn0260960.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21036622	21074154	.	-	.	ID=FBgn0260960.1.mrna1;geneID=FBgn0260960.1.path1;Name=FBgn0260960.1;Dir=sensecoverage=100.0;identity=99.8;matches=958;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006376
Chr1	stalkie_big_nohaplotig	exon	21036622	21037255	99	-	.	Parent=FBgn0260960.1.mrna1;Target=FBgn0260960.1 327 960 +
Chr1	stalkie_big_nohaplotig	exon	21040211	21040348	100	-	.	Parent=FBgn0260960.1.mrna1;Target=FBgn0260960.1 189 326 +
Chr1	stalkie_big_nohaplotig	exon	21073967	21074154	100	-	.	Parent=FBgn0260960.1.mrna1;Target=FBgn0260960.1 1 188 +
Chr1	stalkie_big_nohaplotig	CDS	21036622	21037255	.	-	1	Parent=FBgn0260960.1.mrna1;Target=FBgn0260960.1 327 960 +
Chr1	stalkie_big_nohaplotig	CDS	21040211	21040348	.	-	1	Parent=FBgn0260960.1.mrna1;Target=FBgn0260960.1 189 326 +
Chr1	stalkie_big_nohaplotig	CDS	21073967	21074154	.	-	0	Parent=FBgn0260960.1.mrna1;Target=FBgn0260960.1 1 188 +
Chr1	gffcl	locus	21049385	21049618	.	-	.	ID=RLOC_00006377;geneIDs=comp181517_c0_seq1.path1;transcripts=comp181517_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21049385	21049618	.	-	.	ID=comp181517_c0_seq1.mrna1;geneID=comp181517_c0_seq1.path1;Name=comp181517_c0_seq1;Dir=indeterminatecoverage=91.8;identity=99.6;matches=233;mismatches=1;indels=0;unknowns=0;Target=comp181517_c0_seq1 254 21 .;locus=RLOC_00006377
Chr1	stalkie_big_nohaplotig	exon	21049385	21049618	99	-	.	Parent=comp181517_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	21049385	21049618	.	-	0	Parent=comp181517_c0_seq1.mrna1
Chr1	gffcl	locus	21084771	21098310	.	.	.	ID=RLOC_00006378;geneIDs=FBgn0010223.1.path1,comp117607_c0_seq1.path1;transcripts=FBgn0010223.1.mrna1,comp117607_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21084771	21098310	.	-	.	ID=FBgn0010223.1.mrna1;geneID=FBgn0010223.1.path1;Name=FBgn0010223.1;Dir=sensecoverage=100.0;identity=99.9;matches=1127;mismatches=0;indels=1;unknowns=0;locus=RLOC_00006378
Chr1	stalkie_big_nohaplotig	exon	21084771	21084973	99	-	.	Parent=FBgn0010223.1.mrna1;Target=FBgn0010223.1 925 1128 +
Chr1	stalkie_big_nohaplotig	exon	21085702	21086077	100	-	.	Parent=FBgn0010223.1.mrna1;Target=FBgn0010223.1 549 924 +
Chr1	stalkie_big_nohaplotig	exon	21086261	21086358	100	-	.	Parent=FBgn0010223.1.mrna1;Target=FBgn0010223.1 451 548 +
Chr1	stalkie_big_nohaplotig	exon	21089265	21089433	100	-	.	Parent=FBgn0010223.1.mrna1;Target=FBgn0010223.1 282 450 +
Chr1	stalkie_big_nohaplotig	exon	21089507	21089716	100	-	.	Parent=FBgn0010223.1.mrna1;Target=FBgn0010223.1 72 281 +
Chr1	stalkie_big_nohaplotig	exon	21098240	21098310	100	-	.	Parent=FBgn0010223.1.mrna1;Target=FBgn0010223.1 1 71 +
Chr1	stalkie_big_nohaplotig	CDS	21084771	21084973	.	-	0	Parent=FBgn0010223.1.mrna1;Target=FBgn0010223.1 925 1128 +
Chr1	stalkie_big_nohaplotig	CDS	21085702	21086077	.	-	1	Parent=FBgn0010223.1.mrna1;Target=FBgn0010223.1 549 924 +
Chr1	stalkie_big_nohaplotig	CDS	21086261	21086358	.	-	0	Parent=FBgn0010223.1.mrna1;Target=FBgn0010223.1 451 548 +
Chr1	stalkie_big_nohaplotig	CDS	21089265	21089433	.	-	1	Parent=FBgn0010223.1.mrna1;Target=FBgn0010223.1 282 450 +
Chr1	stalkie_big_nohaplotig	CDS	21089507	21089716	.	-	1	Parent=FBgn0010223.1.mrna1;Target=FBgn0010223.1 72 281 +
Chr1	stalkie_big_nohaplotig	CDS	21098240	21098310	.	-	0	Parent=FBgn0010223.1.mrna1;Target=FBgn0010223.1 1 71 +
Chr1	stalkie_big_nohaplotig	mRNA	21084953	21085502	.	+	.	ID=comp117607_c0_seq1.mrna1;geneID=comp117607_c0_seq1.path1;Name=comp117607_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=550;mismatches=0;indels=0;unknowns=0;Target=comp117607_c0_seq1 550 1 .;CDS_Target=comp117607_c0_seq1 403 308 .;locus=RLOC_00006378
Chr1	stalkie_big_nohaplotig	exon	21084953	21085502	100	+	.	Parent=comp117607_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	21085260	21085355	.	+	0	Parent=comp117607_c0_seq1.mrna1
Chr1	gffcl	locus	21098433	21098807	.	+	.	ID=RLOC_00006379;geneIDs=comp229871_c0_seq1.path1;transcripts=comp229871_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21098433	21098807	.	+	.	ID=comp229871_c0_seq1.mrna1;geneID=comp229871_c0_seq1.path1;Name=comp229871_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=374;mismatches=1;indels=0;unknowns=0;Target=comp229871_c0_seq1 375 1 .;CDS_Target=comp229871_c0_seq1 71 3 .;locus=RLOC_00006379
Chr1	stalkie_big_nohaplotig	exon	21098433	21098807	99	+	.	Parent=comp229871_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	21098435	21098503	.	+	0	Parent=comp229871_c0_seq1.mrna1
Chr1	gffcl	locus	21109488	21110341	.	+	.	ID=RLOC_00006380;geneIDs=comp150222_c0_seq1.path1;transcripts=comp150222_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21109488	21110341	.	+	.	ID=comp150222_c0_seq1.mrna1;geneID=comp150222_c0_seq1.path1;Name=comp150222_c0_seq1;Dir=sensecoverage=99.9;identity=94.2;matches=732;mismatches=1;indels=44;unknowns=0;Target=comp150222_c0_seq1 199 300 +;locus=RLOC_00006380
Chr1	stalkie_big_nohaplotig	exon	21109488	21109819	99	+	.	Parent=comp150222_c0_seq1.mrna1;Target=comp150222_c0_seq1 1 332 +
Chr1	stalkie_big_nohaplotig	exon	21109941	21110341	90	+	.	Parent=comp150222_c0_seq1.mrna1;Target=comp150222_c0_seq1 333 777 +
Chr1	stalkie_big_nohaplotig	CDS	21109686	21109787	.	+	0	Parent=comp150222_c0_seq1.mrna1
Chr1	gffcl	locus	21147496	21171024	.	+	.	ID=RLOC_00006381;geneIDs=FBgn0052264.1.path1;transcripts=FBgn0052264.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21147496	21171024	.	+	.	ID=FBgn0052264.1.mrna1;geneID=FBgn0052264.1.path1;Name=FBgn0052264.1;Dir=sensecoverage=82.1;identity=99.9;matches=1516;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006381
Chr1	stalkie_big_nohaplotig	exon	21147496	21147763	99	+	.	Parent=FBgn0052264.1.mrna1;Target=FBgn0052264.1 331 598 +
Chr1	stalkie_big_nohaplotig	exon	21150921	21151190	99	+	.	Parent=FBgn0052264.1.mrna1;Target=FBgn0052264.1 599 868 +
Chr1	stalkie_big_nohaplotig	exon	21153156	21153468	100	+	.	Parent=FBgn0052264.1.mrna1;Target=FBgn0052264.1 869 1181 +
Chr1	stalkie_big_nohaplotig	exon	21153779	21153808	100	+	.	Parent=FBgn0052264.1.mrna1;Target=FBgn0052264.1 1182 1211 +
Chr1	stalkie_big_nohaplotig	exon	21162748	21163094	100	+	.	Parent=FBgn0052264.1.mrna1;Target=FBgn0052264.1 1212 1558 +
Chr1	stalkie_big_nohaplotig	exon	21163166	21163442	100	+	.	Parent=FBgn0052264.1.mrna1;Target=FBgn0052264.1 1559 1835 +
Chr1	stalkie_big_nohaplotig	exon	21171012	21171024	100	+	.	Parent=FBgn0052264.1.mrna1;Target=FBgn0052264.1 1836 1848 +
Chr1	stalkie_big_nohaplotig	CDS	21147496	21147763	.	+	0	Parent=FBgn0052264.1.mrna1;Target=FBgn0052264.1 331 598 +
Chr1	stalkie_big_nohaplotig	CDS	21150921	21151190	.	+	2	Parent=FBgn0052264.1.mrna1;Target=FBgn0052264.1 599 868 +
Chr1	stalkie_big_nohaplotig	CDS	21153156	21153468	.	+	2	Parent=FBgn0052264.1.mrna1;Target=FBgn0052264.1 869 1181 +
Chr1	stalkie_big_nohaplotig	CDS	21153779	21153808	.	+	1	Parent=FBgn0052264.1.mrna1;Target=FBgn0052264.1 1182 1211 +
Chr1	stalkie_big_nohaplotig	CDS	21162748	21163094	.	+	1	Parent=FBgn0052264.1.mrna1;Target=FBgn0052264.1 1212 1558 +
Chr1	stalkie_big_nohaplotig	CDS	21163166	21163442	.	+	2	Parent=FBgn0052264.1.mrna1;Target=FBgn0052264.1 1559 1835 +
Chr1	stalkie_big_nohaplotig	CDS	21171012	21171024	.	+	1	Parent=FBgn0052264.1.mrna1;Target=FBgn0052264.1 1836 1848 +
Chr1	gffcl	locus	21172580	21172759	.	-	.	ID=RLOC_00006382;geneIDs=comp131663_c0_seq1.path1;transcripts=comp131663_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21172580	21172759	.	-	.	ID=comp131663_c0_seq1.mrna1;geneID=comp131663_c0_seq1.path1;Name=comp131663_c0_seq1;Dir=indeterminatecoverage=88.8;identity=80.3;matches=167;mismatches=12;indels=29;unknowns=0;Target=comp131663_c0_seq1 233 27 .;CDS_Target=comp131663_c0_seq1 40 29 .;locus=RLOC_00006382
Chr1	stalkie_big_nohaplotig	exon	21172580	21172759	80	-	.	Parent=comp131663_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	21172745	21172757	.	-	0	Parent=comp131663_c0_seq1.mrna1
Chr1	gffcl	locus	21177083	21177714	.	-	.	ID=RLOC_00006383;geneIDs=comp161937_c2_seq1.path1;transcripts=comp161937_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21177083	21177714	.	-	.	ID=comp161937_c2_seq1.mrna1;geneID=comp161937_c2_seq1.path1;Name=comp161937_c2_seq1;Dir=indeterminatecoverage=96.2;identity=99.5;matches=630;mismatches=2;indels=1;unknowns=0;Target=comp161937_c2_seq1 633 1 .;CDS_Target=comp161937_c2_seq1 271 194 .;locus=RLOC_00006383
Chr1	stalkie_big_nohaplotig	exon	21177083	21177714	99	-	.	Parent=comp161937_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	21177445	21177521	.	-	0	Parent=comp161937_c2_seq1.mrna1
Chr1	gffcl	locus	21191590	21192302	.	+	.	ID=RLOC_00006386;geneIDs=FBgn0043578.1.path1;transcripts=FBgn0043578.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21191590	21192302	.	+	.	ID=FBgn0043578.1.mrna1;geneID=FBgn0043578.1.path1;Name=FBgn0043578.1;Dir=sensecoverage=100.0;identity=100.0;matches=585;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006386
Chr1	stalkie_big_nohaplotig	exon	21191590	21191656	100	+	.	Parent=FBgn0043578.1.mrna1;Target=FBgn0043578.1 1 67 +
Chr1	stalkie_big_nohaplotig	exon	21191716	21192054	100	+	.	Parent=FBgn0043578.1.mrna1;Target=FBgn0043578.1 68 406 +
Chr1	stalkie_big_nohaplotig	exon	21192124	21192302	100	+	.	Parent=FBgn0043578.1.mrna1;Target=FBgn0043578.1 407 585 +
Chr1	stalkie_big_nohaplotig	CDS	21191590	21191656	.	+	0	Parent=FBgn0043578.1.mrna1;Target=FBgn0043578.1 1 67 +
Chr1	stalkie_big_nohaplotig	CDS	21191716	21192054	.	+	2	Parent=FBgn0043578.1.mrna1;Target=FBgn0043578.1 68 406 +
Chr1	stalkie_big_nohaplotig	CDS	21192124	21192302	.	+	2	Parent=FBgn0043578.1.mrna1;Target=FBgn0043578.1 407 585 +
Chr1	gffcl	locus	21201523	21202403	.	+	.	ID=RLOC_00006387;geneIDs=comp149212_c0_seq1.path1;transcripts=comp149212_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21201523	21202403	.	+	.	ID=comp149212_c0_seq1.mrna1;geneID=comp149212_c0_seq1.path1;Name=comp149212_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=794;mismatches=1;indels=3;unknowns=0;locus=RLOC_00006387
Chr1	stalkie_big_nohaplotig	exon	21201523	21201721	100	+	.	Parent=comp149212_c0_seq1.mrna1;Target=comp149212_c0_seq1 600 798 -
Chr1	stalkie_big_nohaplotig	exon	21201808	21202403	99	+	.	Parent=comp149212_c0_seq1.mrna1;Target=comp149212_c0_seq1 1 599 -
Chr1	stalkie_big_nohaplotig	CDS	21201713	21201721	.	+	0	Parent=comp149212_c0_seq1.mrna1;Target=comp149212_c0_seq1 600 608 .
Chr1	stalkie_big_nohaplotig	CDS	21201808	21202107	.	+	0	Parent=comp149212_c0_seq1.mrna1;Target=comp149212_c0_seq1 300 599 .
Chr1	gffcl	locus	21224783	21225759	.	+	.	ID=RLOC_00006388;geneIDs=comp159241_c0_seq1.path1;transcripts=comp159241_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21224783	21225759	.	+	.	ID=comp159241_c0_seq1.mrna1;geneID=comp159241_c0_seq1.path1;Name=comp159241_c0_seq1;Dir=antisensecoverage=97.7;identity=99.1;matches=858;mismatches=8;indels=0;unknowns=0;locus=RLOC_00006388
Chr1	stalkie_big_nohaplotig	exon	21224783	21225034	98	+	.	Parent=comp159241_c0_seq1.mrna1;Target=comp159241_c0_seq1 617 868 -
Chr1	stalkie_big_nohaplotig	exon	21225090	21225203	99	+	.	Parent=comp159241_c0_seq1.mrna1;Target=comp159241_c0_seq1 503 616 -
Chr1	stalkie_big_nohaplotig	exon	21225260	21225759	99	+	.	Parent=comp159241_c0_seq1.mrna1;Target=comp159241_c0_seq1 3 502 -
Chr1	stalkie_big_nohaplotig	CDS	21225192	21225203	.	+	0	Parent=comp159241_c0_seq1.mrna1;Target=comp159241_c0_seq1 503 514 .
Chr1	stalkie_big_nohaplotig	CDS	21225260	21225709	.	+	0	Parent=comp159241_c0_seq1.mrna1;Target=comp159241_c0_seq1 53 502 .
Chr1	gffcl	locus	21227521	21228083	.	-	.	ID=RLOC_00006389;geneIDs=comp153852_c0_seq1.path1;transcripts=comp153852_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21227521	21228083	.	-	.	ID=comp153852_c0_seq1.mrna1;geneID=comp153852_c0_seq1.path1;Name=comp153852_c0_seq1;Dir=antisensecoverage=99.4;identity=98.8;matches=500;mismatches=4;indels=2;unknowns=0;locus=RLOC_00006389
Chr1	stalkie_big_nohaplotig	exon	21227521	21227769	100	-	.	Parent=comp153852_c0_seq1.mrna1;Target=comp153852_c0_seq1 4 252 -
Chr1	stalkie_big_nohaplotig	exon	21227829	21228083	97	-	.	Parent=comp153852_c0_seq1.mrna1;Target=comp153852_c0_seq1 253 509 -
Chr1	stalkie_big_nohaplotig	CDS	21227701	21227769	.	-	0	Parent=comp153852_c0_seq1.mrna1;Target=comp153852_c0_seq1 184 252 .
Chr1	stalkie_big_nohaplotig	CDS	21227829	21227969	.	-	0	Parent=comp153852_c0_seq1.mrna1;Target=comp153852_c0_seq1 253 393 .
Chr1	gffcl	locus	21236135	23030627	.	-	.	ID=RLOC_00006390;geneIDs=FBgn0000414.path2,FBgn0261698.path1,FBgn0261698.1.path1,comp160323_c0_seq1.path1,comp162752_c0_seq1.path1;transcripts=comp162752_c0_seq1.mrna1,FBgn0261698.mrna1,comp160323_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21236135	23030627	.	-	.	ID=comp162752_c0_seq1.mrna1;geneID=comp162752_c0_seq1.path1;Name=comp162752_c0_seq1;Dir=indeterminatecoverage=76.4;identity=91.4;matches=1259;mismatches=54;indels=64;unknowns=0;Target=comp162752_c0_seq1 832 746 .;locus=RLOC_00006390
Chr1	stalkie_big_nohaplotig	exon	21236135	21236155	48	-	.	Parent=comp162752_c0_seq1.mrna1;Target=comp162752_c0_seq1 1382 1348 .
Chr1	stalkie_big_nohaplotig	exon	21239618	21239631	78	-	.	Parent=comp162752_c0_seq1.mrna1;Target=comp162752_c0_seq1 1347 1334 .
Chr1	stalkie_big_nohaplotig	exon	21243985	21243992	100	-	.	Parent=comp162752_c0_seq1.mrna1;Target=comp162752_c0_seq1 1333 1326 .
Chr1	stalkie_big_nohaplotig	exon	21248595	21248642	52	-	.	Parent=comp162752_c0_seq1.mrna1;Target=comp162752_c0_seq1 1325 1264 .
Chr1	stalkie_big_nohaplotig	exon	21256244	21256253	100	-	.	Parent=comp162752_c0_seq1.mrna1;Target=comp162752_c0_seq1 1263 1254 .
Chr1	stalkie_big_nohaplotig	exon	21268053	21268064	100	-	.	Parent=comp162752_c0_seq1.mrna1;Target=comp162752_c0_seq1 1253 1242 .
Chr1	stalkie_big_nohaplotig	exon	21277568	21277569	100	-	.	Parent=comp162752_c0_seq1.mrna1;Target=comp162752_c0_seq1 1241 1240 .
Chr1	stalkie_big_nohaplotig	exon	21283471	21283472	100	-	.	Parent=comp162752_c0_seq1.mrna1;Target=comp162752_c0_seq1 1239 1238 .
Chr1	stalkie_big_nohaplotig	exon	21288759	21288763	100	-	.	Parent=comp162752_c0_seq1.mrna1;Target=comp162752_c0_seq1 1230 1226 .
Chr1	stalkie_big_nohaplotig	exon	21294868	21294873	100	-	.	Parent=comp162752_c0_seq1.mrna1;Target=comp162752_c0_seq1 1225 1220 .
Chr1	stalkie_big_nohaplotig	exon	23029438	23030627	94	-	.	Parent=comp162752_c0_seq1.mrna1;Target=comp162752_c0_seq1 1216 1 .
Chr1	stalkie_big_nohaplotig	CDS	23029796	23029882	.	-	0	Parent=comp162752_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21242651	21245820	.	-	.	ID=FBgn0261698.mrna1;geneID=FBgn0261698.path1;Name=FBgn0261698;Dir=sensecoverage=57.3;identity=99.2;matches=2825;mismatches=14;indels=9;unknowns=0;locus=RLOC_00006390
Chr1	stalkie_big_nohaplotig	exon	21242651	21242816	99	-	.	Parent=FBgn0261698.mrna1;Target=FBgn0261698 4803 4968 +
Chr1	stalkie_big_nohaplotig	exon	21242920	21243055	100	-	.	Parent=FBgn0261698.mrna1;Target=FBgn0261698 4667 4802 +
Chr1	stalkie_big_nohaplotig	exon	21243122	21243886	99	-	.	Parent=FBgn0261698.mrna1;Target=FBgn0261698 3902 4666 +
Chr1	stalkie_big_nohaplotig	exon	21243967	21244049	96	-	.	Parent=FBgn0261698.mrna1;Target=FBgn0261698 3819 3901 +
Chr1	stalkie_big_nohaplotig	exon	21244132	21245820	99	-	.	Parent=FBgn0261698.mrna1;Target=FBgn0261698 2121 3818 +
Chr1	stalkie_big_nohaplotig	CDS	21242651	21242816	.	-	1	Parent=FBgn0261698.mrna1;Target=FBgn0261698 4803 4968 +
Chr1	stalkie_big_nohaplotig	CDS	21242920	21243055	.	-	2	Parent=FBgn0261698.mrna1;Target=FBgn0261698 4667 4802 +
Chr1	stalkie_big_nohaplotig	CDS	21243122	21243886	.	-	2	Parent=FBgn0261698.mrna1;Target=FBgn0261698 3902 4666 +
Chr1	stalkie_big_nohaplotig	CDS	21243967	21244049	.	-	1	Parent=FBgn0261698.mrna1;Target=FBgn0261698 3819 3901 +
Chr1	stalkie_big_nohaplotig	CDS	21244132	21245819	.	-	0	Parent=FBgn0261698.mrna1;Target=FBgn0261698 2122 3818 +
Chr1	stalkie_big_nohaplotig	mRNA	23027928	23029485	.	-	.	ID=comp160323_c0_seq1.mrna1;geneID=comp160323_c0_seq1.path1;Name=comp160323_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.4;matches=1541;mismatches=17;indels=24;unknowns=0;Target=comp160323_c0_seq1 1582 1 .;CDS_Target=comp160323_c0_seq1 331 203 .;locus=RLOC_00006390
Chr1	stalkie_big_nohaplotig	exon	23027928	23029485	97	-	.	Parent=comp160323_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23029156	23029283	.	-	0	Parent=comp160323_c0_seq1.mrna1
Chr1	gffcl	locus	21239954	21240384	.	-	.	ID=RLOC_00006391;geneIDs=comp149228_c0_seq1.path1;transcripts=comp149228_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21239954	21240384	.	-	.	ID=comp149228_c0_seq1.mrna1;geneID=comp149228_c0_seq1.path1;Name=comp149228_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.0;matches=424;mismatches=7;indels=20;unknowns=0;Target=comp149228_c0_seq1 451 1 .;CDS_Target=comp149228_c0_seq1 449 369 .;locus=RLOC_00006391
Chr1	stalkie_big_nohaplotig	exon	21239954	21240384	94	-	.	Parent=comp149228_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	21239956	21240036	.	-	0	Parent=comp149228_c0_seq1.mrna1
Chr1	gffcl	locus	21240629	21240708	.	-	.	ID=RLOC_00006392;geneIDs=comp155908_c0_seq1.path1;transcripts=comp155908_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21240629	21240708	.	-	.	ID=comp155908_c0_seq1.mrna1;geneID=comp155908_c0_seq1.path1;Name=comp155908_c0_seq1;Dir=indeterminatecoverage=23.9;identity=100.0;matches=80;mismatches=0;indels=0;unknowns=0;Target=comp155908_c0_seq1 99 20 .;CDS_Target=comp155908_c0_seq1 81 22 .;locus=RLOC_00006392
Chr1	stalkie_big_nohaplotig	exon	21240629	21240708	100	-	.	Parent=comp155908_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	21240647	21240706	.	-	0	Parent=comp155908_c0_seq1.mrna1
Chr1	gffcl	locus	21444038	21445572	.	+	.	ID=RLOC_00006394;geneIDs=ORF719.path1;transcripts=ORF719.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21444038	21445572	.	+	.	ID=ORF719.mrna1;geneID=ORF719.path1;Name=ORF719;Dir=indeterminatecoverage=100.0;identity=97.8;matches=1457;mismatches=29;indels=4;unknowns=1;Target=ORF719 32 3 .;locus=RLOC_00006394
Chr1	stalkie_big_nohaplotig	exon	21444038	21445028	97	+	.	Parent=ORF719.mrna1;Target=ORF719 995 1 .
Chr1	stalkie_big_nohaplotig	exon	21445077	21445572	98	+	.	Parent=ORF719.mrna1;Target=ORF719 1491 996 .
Chr1	stalkie_big_nohaplotig	CDS	21444040	21444068	.	+	0	Parent=ORF719.mrna1
Chr1	gffcl	locus	21517492	21520520	.	+	.	ID=RLOC_00006395;geneIDs=comp163249_c0_seq1.path1;transcripts=comp163249_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21517492	21520520	.	+	.	ID=comp163249_c0_seq1.mrna1;geneID=comp163249_c0_seq1.path1;Name=comp163249_c0_seq1;Dir=sensecoverage=1.6;identity=98.2;matches=109;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006395
Chr1	stalkie_big_nohaplotig	exon	21517492	21517527	100	+	.	Parent=comp163249_c0_seq1.mrna1;Target=comp163249_c0_seq1 14 49 +
Chr1	stalkie_big_nohaplotig	exon	21520446	21520520	97	+	.	Parent=comp163249_c0_seq1.mrna1;Target=comp163249_c0_seq1 50 124 +
Chr1	gffcl	locus	21521554	21589970	.	.	.	ID=RLOC_00006396;geneIDs=comp116300_c1_seq1.path1,comp116300_c1_seq1.path2;transcripts=comp116300_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	21521554	21589947	.	+	.	ID=comp116300_c1_seq1.mrna2;geneID=comp116300_c1_seq1.path2;Name=comp116300_c1_seq1;Dir=indeterminatecoverage=66.7;identity=99.3;matches=294;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006396
Chr1	stalkie_big_nohaplotig	exon	21521554	21521557	100	+	.	Parent=comp116300_c1_seq1.mrna2;Target=comp116300_c1_seq1 153 150 .
Chr1	stalkie_big_nohaplotig	exon	21526552	21526562	90	+	.	Parent=comp116300_c1_seq1.mrna2;Target=comp116300_c1_seq1 164 154 .
Chr1	stalkie_big_nohaplotig	exon	21530706	21530713	100	+	.	Parent=comp116300_c1_seq1.mrna2;Target=comp116300_c1_seq1 172 165 .
Chr1	stalkie_big_nohaplotig	exon	21534301	21534303	100	+	.	Parent=comp116300_c1_seq1.mrna2;Target=comp116300_c1_seq1 175 173 .
Chr1	stalkie_big_nohaplotig	exon	21542151	21542157	100	+	.	Parent=comp116300_c1_seq1.mrna2;Target=comp116300_c1_seq1 182 176 .
Chr1	stalkie_big_nohaplotig	exon	21544529	21544533	100	+	.	Parent=comp116300_c1_seq1.mrna2;Target=comp116300_c1_seq1 187 183 .
Chr1	stalkie_big_nohaplotig	exon	21547946	21547952	100	+	.	Parent=comp116300_c1_seq1.mrna2;Target=comp116300_c1_seq1 194 188 .
Chr1	stalkie_big_nohaplotig	exon	21548119	21548123	100	+	.	Parent=comp116300_c1_seq1.mrna2;Target=comp116300_c1_seq1 199 195 .
Chr1	stalkie_big_nohaplotig	exon	21552670	21552671	100	+	.	Parent=comp116300_c1_seq1.mrna2;Target=comp116300_c1_seq1 201 200 .
Chr1	stalkie_big_nohaplotig	exon	21556029	21556030	100	+	.	Parent=comp116300_c1_seq1.mrna2;Target=comp116300_c1_seq1 203 202 .
Chr1	stalkie_big_nohaplotig	exon	21559513	21559514	100	+	.	Parent=comp116300_c1_seq1.mrna2;Target=comp116300_c1_seq1 205 204 .
Chr1	stalkie_big_nohaplotig	exon	21581841	21581844	100	+	.	Parent=comp116300_c1_seq1.mrna2;Target=comp116300_c1_seq1 209 206 .
Chr1	stalkie_big_nohaplotig	exon	21588031	21588033	100	+	.	Parent=comp116300_c1_seq1.mrna2;Target=comp116300_c1_seq1 212 210 .
Chr1	stalkie_big_nohaplotig	exon	21589716	21589947	99	+	.	Parent=comp116300_c1_seq1.mrna2;Target=comp116300_c1_seq1 444 213 .
Chr1	gffcl	locus	21628648	21629115	.	+	.	ID=RLOC_00006397;geneIDs=comp3245_c0_seq1.path1;transcripts=comp3245_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21628648	21629115	.	+	.	ID=comp3245_c0_seq1.mrna1;geneID=comp3245_c0_seq1.path1;Name=comp3245_c0_seq1;Dir=antisensecoverage=98.9;identity=99.5;matches=374;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006397
Chr1	stalkie_big_nohaplotig	exon	21628648	21628692	97	+	.	Parent=comp3245_c0_seq1.mrna1;Target=comp3245_c0_seq1 336 380 -
Chr1	stalkie_big_nohaplotig	exon	21628785	21629115	99	+	.	Parent=comp3245_c0_seq1.mrna1;Target=comp3245_c0_seq1 5 335 -
Chr1	stalkie_big_nohaplotig	CDS	21628681	21628692	.	+	0	Parent=comp3245_c0_seq1.mrna1;Target=comp3245_c0_seq1 336 347 .
Chr1	stalkie_big_nohaplotig	CDS	21628785	21629003	.	+	0	Parent=comp3245_c0_seq1.mrna1;Target=comp3245_c0_seq1 117 335 .
Chr1	gffcl	locus	21695563	21696706	.	+	.	ID=RLOC_00006398;geneIDs=comp60489_c0_seq1.path1,comp148156_c0_seq1.path1;transcripts=comp148156_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21695563	21696160	.	+	.	ID=comp148156_c0_seq1.mrna1;geneID=comp148156_c0_seq1.path1;Name=comp148156_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=598;mismatches=0;indels=0;unknowns=0;Target=comp148156_c0_seq1 598 1 .;CDS_Target=comp148156_c0_seq1 455 348 .;locus=RLOC_00006398
Chr1	stalkie_big_nohaplotig	exon	21695563	21696160	100	+	.	Parent=comp148156_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	21695910	21696017	.	+	0	Parent=comp148156_c0_seq1.mrna1
Chr1	gffcl	locus	21697317	21702818	.	-	.	ID=RLOC_00006399;geneIDs=FBgn0035601.1.path1;transcripts=FBgn0035601.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21697317	21702818	.	-	.	ID=FBgn0035601.1.mrna1;geneID=FBgn0035601.1.path1;Name=FBgn0035601.1;Dir=sensecoverage=100.0;identity=100.0;matches=462;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006399
Chr1	stalkie_big_nohaplotig	exon	21697317	21697454	100	-	.	Parent=FBgn0035601.1.mrna1;Target=FBgn0035601.1 325 462 +
Chr1	stalkie_big_nohaplotig	exon	21697526	21697651	100	-	.	Parent=FBgn0035601.1.mrna1;Target=FBgn0035601.1 199 324 +
Chr1	stalkie_big_nohaplotig	exon	21700044	21700186	100	-	.	Parent=FBgn0035601.1.mrna1;Target=FBgn0035601.1 56 198 +
Chr1	stalkie_big_nohaplotig	exon	21702764	21702818	100	-	.	Parent=FBgn0035601.1.mrna1;Target=FBgn0035601.1 1 55 +
Chr1	stalkie_big_nohaplotig	CDS	21697317	21697454	.	-	0	Parent=FBgn0035601.1.mrna1;Target=FBgn0035601.1 325 462 +
Chr1	stalkie_big_nohaplotig	CDS	21697526	21697651	.	-	0	Parent=FBgn0035601.1.mrna1;Target=FBgn0035601.1 199 324 +
Chr1	stalkie_big_nohaplotig	CDS	21700044	21700186	.	-	2	Parent=FBgn0035601.1.mrna1;Target=FBgn0035601.1 56 198 +
Chr1	stalkie_big_nohaplotig	CDS	21702764	21702818	.	-	0	Parent=FBgn0035601.1.mrna1;Target=FBgn0035601.1 1 55 +
Chr1	gffcl	locus	21700750	21701234	.	+	.	ID=RLOC_00006400;geneIDs=comp151525_c0_seq1.path1;transcripts=comp151525_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21700750	21701234	.	+	.	ID=comp151525_c0_seq1.mrna1;geneID=comp151525_c0_seq1.path1;Name=comp151525_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=481;mismatches=4;indels=0;unknowns=0;Target=comp151525_c0_seq1 485 1 .;CDS_Target=comp151525_c0_seq1 187 74 .;locus=RLOC_00006400
Chr1	stalkie_big_nohaplotig	exon	21700750	21701234	99	+	.	Parent=comp151525_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	21700823	21700936	.	+	0	Parent=comp151525_c0_seq1.mrna1
Chr1	gffcl	locus	21705068	21707608	.	+	.	ID=RLOC_00006401;geneIDs=FBgn0034816.1.path1;transcripts=FBgn0034816.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21705068	21707608	.	+	.	ID=FBgn0034816.1.mrna1;geneID=FBgn0034816.1.path1;Name=FBgn0034816.1;Dir=sensecoverage=100.0;identity=98.6;matches=1389;mismatches=3;indels=17;unknowns=0;locus=RLOC_00006401
Chr1	stalkie_big_nohaplotig	exon	21705068	21705273	91	+	.	Parent=FBgn0034816.1.mrna1;Target=FBgn0034816.1 1 189 +
Chr1	stalkie_big_nohaplotig	exon	21705335	21705453	99	+	.	Parent=FBgn0034816.1.mrna1;Target=FBgn0034816.1 190 308 +
Chr1	stalkie_big_nohaplotig	exon	21706401	21706832	100	+	.	Parent=FBgn0034816.1.mrna1;Target=FBgn0034816.1 309 740 +
Chr1	stalkie_big_nohaplotig	exon	21706887	21707109	99	+	.	Parent=FBgn0034816.1.mrna1;Target=FBgn0034816.1 741 963 +
Chr1	stalkie_big_nohaplotig	exon	21707180	21707608	100	+	.	Parent=FBgn0034816.1.mrna1;Target=FBgn0034816.1 964 1392 +
Chr1	stalkie_big_nohaplotig	CDS	21705181	21705273	.	+	0	Parent=FBgn0034816.1.mrna1;Target=FBgn0034816.1 97 189 +
Chr1	stalkie_big_nohaplotig	CDS	21705335	21705453	.	+	0	Parent=FBgn0034816.1.mrna1;Target=FBgn0034816.1 190 308 +
Chr1	stalkie_big_nohaplotig	CDS	21706401	21706832	.	+	1	Parent=FBgn0034816.1.mrna1;Target=FBgn0034816.1 309 740 +
Chr1	stalkie_big_nohaplotig	CDS	21706887	21707109	.	+	1	Parent=FBgn0034816.1.mrna1;Target=FBgn0034816.1 741 963 +
Chr1	stalkie_big_nohaplotig	CDS	21707180	21707608	.	+	0	Parent=FBgn0034816.1.mrna1;Target=FBgn0034816.1 964 1392 +
Chr1	gffcl	locus	21707825	21711410	.	-	.	ID=RLOC_00006402;geneIDs=FBgn0034817.1.path1;transcripts=FBgn0034817.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21707825	21711410	.	-	.	ID=FBgn0034817.1.mrna1;geneID=FBgn0034817.1.path1;Name=FBgn0034817.1;Dir=sensecoverage=100.0;identity=99.3;matches=2169;mismatches=15;indels=0;unknowns=0;locus=RLOC_00006402
Chr1	stalkie_big_nohaplotig	exon	21707825	21708083	100	-	.	Parent=FBgn0034817.1.mrna1;Target=FBgn0034817.1 1926 2184 +
Chr1	stalkie_big_nohaplotig	exon	21709299	21709450	99	-	.	Parent=FBgn0034817.1.mrna1;Target=FBgn0034817.1 1774 1925 +
Chr1	stalkie_big_nohaplotig	exon	21709513	21711015	99	-	.	Parent=FBgn0034817.1.mrna1;Target=FBgn0034817.1 271 1773 +
Chr1	stalkie_big_nohaplotig	exon	21711141	21711410	99	-	.	Parent=FBgn0034817.1.mrna1;Target=FBgn0034817.1 1 270 +
Chr1	stalkie_big_nohaplotig	CDS	21707825	21708083	.	-	1	Parent=FBgn0034817.1.mrna1;Target=FBgn0034817.1 1926 2184 +
Chr1	stalkie_big_nohaplotig	CDS	21709299	21709450	.	-	0	Parent=FBgn0034817.1.mrna1;Target=FBgn0034817.1 1774 1925 +
Chr1	stalkie_big_nohaplotig	CDS	21709513	21711015	.	-	0	Parent=FBgn0034817.1.mrna1;Target=FBgn0034817.1 271 1773 +
Chr1	stalkie_big_nohaplotig	CDS	21711141	21711410	.	-	0	Parent=FBgn0034817.1.mrna1;Target=FBgn0034817.1 1 270 +
Chr1	gffcl	locus	21712011	21713126	.	-	.	ID=RLOC_00006403;geneIDs=FBgn0036648.1.path1;transcripts=FBgn0036648.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21712011	21713126	.	-	.	ID=FBgn0036648.1.mrna1;geneID=FBgn0036648.1.path1;Name=FBgn0036648.1;Dir=sensecoverage=100.0;identity=99.4;matches=918;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006403
Chr1	stalkie_big_nohaplotig	exon	21712011	21712282	100	-	.	Parent=FBgn0036648.1.mrna1;Target=FBgn0036648.1 653 924 +
Chr1	stalkie_big_nohaplotig	exon	21712344	21712480	100	-	.	Parent=FBgn0036648.1.mrna1;Target=FBgn0036648.1 516 652 +
Chr1	stalkie_big_nohaplotig	exon	21712549	21712675	99	-	.	Parent=FBgn0036648.1.mrna1;Target=FBgn0036648.1 389 515 +
Chr1	stalkie_big_nohaplotig	exon	21712739	21713126	98	-	.	Parent=FBgn0036648.1.mrna1;Target=FBgn0036648.1 1 388 +
Chr1	stalkie_big_nohaplotig	CDS	21712011	21712282	.	-	2	Parent=FBgn0036648.1.mrna1;Target=FBgn0036648.1 653 924 +
Chr1	stalkie_big_nohaplotig	CDS	21712344	21712480	.	-	1	Parent=FBgn0036648.1.mrna1;Target=FBgn0036648.1 516 652 +
Chr1	stalkie_big_nohaplotig	CDS	21712549	21712675	.	-	2	Parent=FBgn0036648.1.mrna1;Target=FBgn0036648.1 389 515 +
Chr1	stalkie_big_nohaplotig	CDS	21712739	21713126	.	-	0	Parent=FBgn0036648.1.mrna1;Target=FBgn0036648.1 1 388 +
Chr1	gffcl	locus	21715330	21718318	.	+	.	ID=RLOC_00006404;geneIDs=FBgn0039838.2.path1;transcripts=FBgn0039838.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21715330	21718318	.	+	.	ID=FBgn0039838.2.mrna1;geneID=FBgn0039838.2.path1;Name=FBgn0039838.2;Dir=sensecoverage=100.0;identity=99.6;matches=929;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006404
Chr1	stalkie_big_nohaplotig	exon	21715330	21715399	100	+	.	Parent=FBgn0039838.2.mrna1;Target=FBgn0039838.2 1 70 +
Chr1	stalkie_big_nohaplotig	exon	21716716	21716793	100	+	.	Parent=FBgn0039838.2.mrna1;Target=FBgn0039838.2 71 148 +
Chr1	stalkie_big_nohaplotig	exon	21716855	21716952	100	+	.	Parent=FBgn0039838.2.mrna1;Target=FBgn0039838.2 149 246 +
Chr1	stalkie_big_nohaplotig	exon	21717021	21717123	100	+	.	Parent=FBgn0039838.2.mrna1;Target=FBgn0039838.2 247 349 +
Chr1	stalkie_big_nohaplotig	exon	21717205	21717452	98	+	.	Parent=FBgn0039838.2.mrna1;Target=FBgn0039838.2 350 597 +
Chr1	stalkie_big_nohaplotig	exon	21717832	21717985	99	+	.	Parent=FBgn0039838.2.mrna1;Target=FBgn0039838.2 598 751 +
Chr1	stalkie_big_nohaplotig	exon	21718080	21718159	100	+	.	Parent=FBgn0039838.2.mrna1;Target=FBgn0039838.2 752 831 +
Chr1	stalkie_big_nohaplotig	exon	21718217	21718318	100	+	.	Parent=FBgn0039838.2.mrna1;Target=FBgn0039838.2 832 933 +
Chr1	stalkie_big_nohaplotig	CDS	21715330	21715399	.	+	0	Parent=FBgn0039838.2.mrna1;Target=FBgn0039838.2 1 70 +
Chr1	stalkie_big_nohaplotig	CDS	21716716	21716793	.	+	2	Parent=FBgn0039838.2.mrna1;Target=FBgn0039838.2 71 148 +
Chr1	stalkie_big_nohaplotig	CDS	21716855	21716952	.	+	2	Parent=FBgn0039838.2.mrna1;Target=FBgn0039838.2 149 246 +
Chr1	stalkie_big_nohaplotig	CDS	21717021	21717123	.	+	0	Parent=FBgn0039838.2.mrna1;Target=FBgn0039838.2 247 349 +
Chr1	stalkie_big_nohaplotig	CDS	21717205	21717452	.	+	2	Parent=FBgn0039838.2.mrna1;Target=FBgn0039838.2 350 597 +
Chr1	stalkie_big_nohaplotig	CDS	21717832	21717985	.	+	0	Parent=FBgn0039838.2.mrna1;Target=FBgn0039838.2 598 751 +
Chr1	stalkie_big_nohaplotig	CDS	21718080	21718159	.	+	2	Parent=FBgn0039838.2.mrna1;Target=FBgn0039838.2 752 831 +
Chr1	stalkie_big_nohaplotig	CDS	21718217	21718318	.	+	0	Parent=FBgn0039838.2.mrna1;Target=FBgn0039838.2 832 933 +
Chr1	gffcl	locus	21731116	21733030	.	+	.	ID=RLOC_00006405;geneIDs=FBgn0035445.1.path1;transcripts=FBgn0035445.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21731116	21733030	.	+	.	ID=FBgn0035445.1.mrna1;geneID=FBgn0035445.1.path1;Name=FBgn0035445.1;Dir=sensecoverage=100.0;identity=99.9;matches=1582;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006405
Chr1	stalkie_big_nohaplotig	exon	21731116	21731370	100	+	.	Parent=FBgn0035445.1.mrna1;Target=FBgn0035445.1 1 255 +
Chr1	stalkie_big_nohaplotig	exon	21731633	21732824	99	+	.	Parent=FBgn0035445.1.mrna1;Target=FBgn0035445.1 256 1447 +
Chr1	stalkie_big_nohaplotig	exon	21732894	21733030	100	+	.	Parent=FBgn0035445.1.mrna1;Target=FBgn0035445.1 1448 1584 +
Chr1	stalkie_big_nohaplotig	CDS	21731116	21731370	.	+	0	Parent=FBgn0035445.1.mrna1;Target=FBgn0035445.1 1 255 +
Chr1	stalkie_big_nohaplotig	CDS	21731633	21732824	.	+	0	Parent=FBgn0035445.1.mrna1;Target=FBgn0035445.1 256 1447 +
Chr1	stalkie_big_nohaplotig	CDS	21732894	21733030	.	+	2	Parent=FBgn0035445.1.mrna1;Target=FBgn0035445.1 1448 1584 +
Chr1	gffcl	locus	21844209	21844907	.	-	.	ID=RLOC_00006407;geneIDs=comp115394_c0_seq1.path1;transcripts=comp115394_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21844209	21844907	.	-	.	ID=comp115394_c0_seq1.mrna1;geneID=comp115394_c0_seq1.path1;Name=comp115394_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.0;matches=679;mismatches=12;indels=9;unknowns=0;Target=comp115394_c0_seq1 692 1 .;CDS_Target=comp115394_c0_seq1 136 2 .;locus=RLOC_00006407
Chr1	stalkie_big_nohaplotig	exon	21844209	21844907	97	-	.	Parent=comp115394_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	21844770	21844906	.	-	0	Parent=comp115394_c0_seq1.mrna1
Chr1	gffcl	locus	21845177	21845708	.	-	.	ID=RLOC_00006408;geneIDs=comp136415_c0_seq1.path1;transcripts=comp136415_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21845177	21845708	.	-	.	ID=comp136415_c0_seq1.mrna1;geneID=comp136415_c0_seq1.path1;Name=comp136415_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.4;matches=529;mismatches=3;indels=0;unknowns=0;Target=comp136415_c0_seq1 532 1 .;CDS_Target=comp136415_c0_seq1 307 209 .;locus=RLOC_00006408
Chr1	stalkie_big_nohaplotig	exon	21845177	21845708	99	-	.	Parent=comp136415_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	21845402	21845500	.	-	0	Parent=comp136415_c0_seq1.mrna1
Chr1	gffcl	locus	21846335	21846567	.	+	.	ID=RLOC_00006409;geneIDs=comp883509_c0_seq1.path1;transcripts=comp883509_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21846335	21846567	.	+	.	ID=comp883509_c0_seq1.mrna1;geneID=comp883509_c0_seq1.path1;Name=comp883509_c0_seq1;Dir=indeterminatecoverage=90.7;identity=95.7;matches=223;mismatches=2;indels=8;unknowns=0;Target=comp883509_c0_seq1 248 24 .;CDS_Target=comp883509_c0_seq1 154 122 .;locus=RLOC_00006409
Chr1	stalkie_big_nohaplotig	exon	21846335	21846567	95	+	.	Parent=comp883509_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	21846433	21846465	.	+	0	Parent=comp883509_c0_seq1.mrna1
Chr1	gffcl	locus	21852505	21852964	.	-	.	ID=RLOC_00006410;geneIDs=comp159489_c0_seq1.path1;transcripts=comp159489_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21852505	21852964	.	-	.	ID=comp159489_c0_seq1.mrna1;geneID=comp159489_c0_seq1.path1;Name=comp159489_c0_seq1;Dir=indeterminatecoverage=97.0;identity=97.0;matches=446;mismatches=14;indels=0;unknowns=0;Target=comp159489_c0_seq1 474 15 .;CDS_Target=comp159489_c0_seq1 95 15 .;locus=RLOC_00006410
Chr1	stalkie_big_nohaplotig	exon	21852505	21852964	96	-	.	Parent=comp159489_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	21852884	21852964	.	-	0	Parent=comp159489_c0_seq1.mrna1
Chr1	gffcl	locus	21853760	21854646	.	+	.	ID=RLOC_00006411;geneIDs=comp157842_c0_seq1.path1;transcripts=comp157842_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21853760	21854646	.	+	.	ID=comp157842_c0_seq1.mrna1;geneID=comp157842_c0_seq1.path1;Name=comp157842_c0_seq1;Dir=indeterminatecoverage=97.7;identity=97.9;matches=868;mismatches=17;indels=2;unknowns=0;Target=comp157842_c0_seq1 906 22 .;CDS_Target=comp157842_c0_seq1 420 181 .;locus=RLOC_00006411
Chr1	stalkie_big_nohaplotig	exon	21853760	21854646	97	+	.	Parent=comp157842_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	21853919	21854160	.	+	0	Parent=comp157842_c0_seq1.mrna1
Chr1	gffcl	locus	21984379	21985492	.	-	.	ID=RLOC_00006413;geneIDs=comp161323_c0_seq1.path1;transcripts=comp161323_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21984379	21985492	.	-	.	ID=comp161323_c0_seq1.mrna1;geneID=comp161323_c0_seq1.path1;Name=comp161323_c0_seq1;Dir=indeterminatecoverage=99.9;identity=94.3;matches=1062;mismatches=20;indels=44;unknowns=0;Target=comp161323_c0_seq1 1095 2 .;CDS_Target=comp161323_c0_seq1 529 431 .;locus=RLOC_00006413
Chr1	stalkie_big_nohaplotig	exon	21984379	21985492	94	-	.	Parent=comp161323_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	21984969	21985067	.	-	0	Parent=comp161323_c0_seq1.mrna1
Chr1	gffcl	locus	21988373	21990000	.	-	.	ID=RLOC_00006414;geneIDs=FBgn0036660.1.path1;transcripts=FBgn0036660.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21988373	21990000	.	-	.	ID=FBgn0036660.1.mrna1;geneID=FBgn0036660.1.path1;Name=FBgn0036660.1;Dir=sensecoverage=100.0;identity=99.0;matches=1553;mismatches=14;indels=2;unknowns=0;Target=FBgn0036660.1 2 55 +;locus=RLOC_00006414
Chr1	stalkie_big_nohaplotig	exon	21988373	21988923	99	-	.	Parent=FBgn0036660.1.mrna1;Target=FBgn0036660.1 1019 1569 +
Chr1	stalkie_big_nohaplotig	exon	21988985	21990000	98	-	.	Parent=FBgn0036660.1.mrna1;Target=FBgn0036660.1 1 1018 +
Chr1	stalkie_big_nohaplotig	CDS	21989948	21989999	.	-	0	Parent=FBgn0036660.1.mrna1
Chr1	gffcl	locus	21992484	21993142	.	+	.	ID=RLOC_00006415;geneIDs=FBgn0036661.1.path1;transcripts=FBgn0036661.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21992484	21993142	.	+	.	ID=FBgn0036661.1.mrna1;geneID=FBgn0036661.1.path1;Name=FBgn0036661.1;Dir=sensecoverage=100.0;identity=99.3;matches=435;mismatches=3;indels=0;unknowns=0;locus=RLOC_00006415
Chr1	stalkie_big_nohaplotig	exon	21992484	21992629	100	+	.	Parent=FBgn0036661.1.mrna1;Target=FBgn0036661.1 1 146 +
Chr1	stalkie_big_nohaplotig	exon	21992700	21992822	99	+	.	Parent=FBgn0036661.1.mrna1;Target=FBgn0036661.1 147 269 +
Chr1	stalkie_big_nohaplotig	exon	21992974	21993142	98	+	.	Parent=FBgn0036661.1.mrna1;Target=FBgn0036661.1 270 438 +
Chr1	stalkie_big_nohaplotig	CDS	21992484	21992629	.	+	0	Parent=FBgn0036661.1.mrna1;Target=FBgn0036661.1 1 146 +
Chr1	stalkie_big_nohaplotig	CDS	21992700	21992822	.	+	1	Parent=FBgn0036661.1.mrna1;Target=FBgn0036661.1 147 269 +
Chr1	stalkie_big_nohaplotig	CDS	21992974	21993142	.	+	1	Parent=FBgn0036661.1.mrna1;Target=FBgn0036661.1 270 438 +
Chr1	gffcl	locus	21995588	21997375	.	+	.	ID=RLOC_00006416;geneIDs=FBgn0036662.1.path1;transcripts=FBgn0036662.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21995588	21997375	.	+	.	ID=FBgn0036662.1.mrna1;geneID=FBgn0036662.1.path1;Name=FBgn0036662.1;Dir=sensecoverage=98.9;identity=99.9;matches=1604;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006416
Chr1	stalkie_big_nohaplotig	exon	21995588	21997021	99	+	.	Parent=FBgn0036662.1.mrna1;Target=FBgn0036662.1 1 1434 +
Chr1	stalkie_big_nohaplotig	exon	21997205	21997375	100	+	.	Parent=FBgn0036662.1.mrna1;Target=FBgn0036662.1 1435 1605 +
Chr1	stalkie_big_nohaplotig	CDS	21995588	21997021	.	+	0	Parent=FBgn0036662.1.mrna1;Target=FBgn0036662.1 1 1434 +
Chr1	stalkie_big_nohaplotig	CDS	21997205	21997375	.	+	0	Parent=FBgn0036662.1.mrna1;Target=FBgn0036662.1 1435 1605 +
Chr1	gffcl	locus	21997883	22000516	.	-	.	ID=RLOC_00006417;geneIDs=FBgn0025582.1.path1;transcripts=FBgn0025582.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	21997883	22000516	.	-	.	ID=FBgn0025582.1.mrna1;geneID=FBgn0025582.1.path1;Name=FBgn0025582.1;Dir=sensecoverage=100.0;identity=99.9;matches=1307;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006417
Chr1	stalkie_big_nohaplotig	exon	21997883	21998701	99	-	.	Parent=FBgn0025582.1.mrna1;Target=FBgn0025582.1 490 1308 +
Chr1	stalkie_big_nohaplotig	exon	21999975	22000367	100	-	.	Parent=FBgn0025582.1.mrna1;Target=FBgn0025582.1 97 489 +
Chr1	stalkie_big_nohaplotig	exon	22000421	22000516	100	-	.	Parent=FBgn0025582.1.mrna1;Target=FBgn0025582.1 1 96 +
Chr1	stalkie_big_nohaplotig	CDS	21997883	21998701	.	-	0	Parent=FBgn0025582.1.mrna1;Target=FBgn0025582.1 490 1308 +
Chr1	stalkie_big_nohaplotig	CDS	21999975	22000367	.	-	0	Parent=FBgn0025582.1.mrna1;Target=FBgn0025582.1 97 489 +
Chr1	stalkie_big_nohaplotig	CDS	22000421	22000516	.	-	0	Parent=FBgn0025582.1.mrna1;Target=FBgn0025582.1 1 96 +
Chr1	gffcl	locus	22007060	22007702	.	-	.	ID=RLOC_00006418;geneIDs=FBgn0035603.1.path1;transcripts=FBgn0035603.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22007060	22007702	.	-	.	ID=FBgn0035603.1.mrna1;geneID=FBgn0035603.1.path1;Name=FBgn0035603.1;Dir=sensecoverage=100.0;identity=100.0;matches=417;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006418
Chr1	stalkie_big_nohaplotig	exon	22007060	22007206	100	-	.	Parent=FBgn0035603.1.mrna1;Target=FBgn0035603.1 271 417 +
Chr1	stalkie_big_nohaplotig	exon	22007264	22007482	100	-	.	Parent=FBgn0035603.1.mrna1;Target=FBgn0035603.1 52 270 +
Chr1	stalkie_big_nohaplotig	exon	22007652	22007702	100	-	.	Parent=FBgn0035603.1.mrna1;Target=FBgn0035603.1 1 51 +
Chr1	stalkie_big_nohaplotig	CDS	22007060	22007206	.	-	0	Parent=FBgn0035603.1.mrna1;Target=FBgn0035603.1 271 417 +
Chr1	stalkie_big_nohaplotig	CDS	22007264	22007482	.	-	0	Parent=FBgn0035603.1.mrna1;Target=FBgn0035603.1 52 270 +
Chr1	stalkie_big_nohaplotig	CDS	22007652	22007702	.	-	0	Parent=FBgn0035603.1.mrna1;Target=FBgn0035603.1 1 51 +
Chr1	gffcl	locus	22028328	22029784	.	+	.	ID=RLOC_00006419;geneIDs=comp1297239_c0_seq1.path1;transcripts=comp1297239_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22028328	22029784	.	+	.	ID=comp1297239_c0_seq1.mrna1;geneID=comp1297239_c0_seq1.path1;Name=comp1297239_c0_seq1;Dir=antisensecoverage=100.0;identity=97.3;matches=250;mismatches=6;indels=1;unknowns=0;locus=RLOC_00006419
Chr1	stalkie_big_nohaplotig	exon	22028328	22028350	100	+	.	Parent=comp1297239_c0_seq1.mrna1;Target=comp1297239_c0_seq1 234 256 -
Chr1	stalkie_big_nohaplotig	exon	22028610	22028688	97	+	.	Parent=comp1297239_c0_seq1.mrna1;Target=comp1297239_c0_seq1 156 233 -
Chr1	stalkie_big_nohaplotig	exon	22029183	22029316	96	+	.	Parent=comp1297239_c0_seq1.mrna1;Target=comp1297239_c0_seq1 22 155 -
Chr1	stalkie_big_nohaplotig	exon	22029764	22029784	100	+	.	Parent=comp1297239_c0_seq1.mrna1;Target=comp1297239_c0_seq1 1 21 -
Chr1	stalkie_big_nohaplotig	CDS	22028329	22028350	.	+	0	Parent=comp1297239_c0_seq1.mrna1;Target=comp1297239_c0_seq1 234 255 .
Chr1	stalkie_big_nohaplotig	CDS	22028610	22028672	.	+	2	Parent=comp1297239_c0_seq1.mrna1;Target=comp1297239_c0_seq1 172 233 .
Chr1	gffcl	locus	22031465	22038564	.	+	.	ID=RLOC_00006420;geneIDs=FBgn0035770.1.path1;transcripts=FBgn0035770.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22031465	22038564	.	+	.	ID=FBgn0035770.1.mrna1;geneID=FBgn0035770.1.path1;Name=FBgn0035770.1;Dir=sensecoverage=100.0;identity=99.5;matches=1976;mismatches=10;indels=0;unknowns=0;locus=RLOC_00006420
Chr1	stalkie_big_nohaplotig	exon	22031465	22031666	100	+	.	Parent=FBgn0035770.1.mrna1;Target=FBgn0035770.1 1 202 +
Chr1	stalkie_big_nohaplotig	exon	22032356	22032493	100	+	.	Parent=FBgn0035770.1.mrna1;Target=FBgn0035770.1 203 340 +
Chr1	stalkie_big_nohaplotig	exon	22032559	22033100	98	+	.	Parent=FBgn0035770.1.mrna1;Target=FBgn0035770.1 341 882 +
Chr1	stalkie_big_nohaplotig	exon	22033953	22034042	100	+	.	Parent=FBgn0035770.1.mrna1;Target=FBgn0035770.1 883 972 +
Chr1	stalkie_big_nohaplotig	exon	22034103	22034272	100	+	.	Parent=FBgn0035770.1.mrna1;Target=FBgn0035770.1 973 1142 +
Chr1	stalkie_big_nohaplotig	exon	22037721	22038564	100	+	.	Parent=FBgn0035770.1.mrna1;Target=FBgn0035770.1 1143 1986 +
Chr1	stalkie_big_nohaplotig	CDS	22031465	22031666	.	+	0	Parent=FBgn0035770.1.mrna1;Target=FBgn0035770.1 1 202 +
Chr1	stalkie_big_nohaplotig	CDS	22032356	22032493	.	+	2	Parent=FBgn0035770.1.mrna1;Target=FBgn0035770.1 203 340 +
Chr1	stalkie_big_nohaplotig	CDS	22032559	22033100	.	+	2	Parent=FBgn0035770.1.mrna1;Target=FBgn0035770.1 341 882 +
Chr1	stalkie_big_nohaplotig	CDS	22033953	22034042	.	+	0	Parent=FBgn0035770.1.mrna1;Target=FBgn0035770.1 883 972 +
Chr1	stalkie_big_nohaplotig	CDS	22034103	22034272	.	+	0	Parent=FBgn0035770.1.mrna1;Target=FBgn0035770.1 973 1142 +
Chr1	stalkie_big_nohaplotig	CDS	22037721	22038564	.	+	1	Parent=FBgn0035770.1.mrna1;Target=FBgn0035770.1 1143 1986 +
Chr1	stalkie_big_nohaplotig	mRNA	22062011	22069356	.	+	.	ID=comp149629_c0_seq1.mrna1;geneID=comp149629_c0_seq1.path1;Name=comp149629_c0_seq1;Dir=sensecoverage=100.0;identity=97.6;matches=290;mismatches=5;indels=2;unknowns=0;Target=comp149629_c0_seq1 3 68 +;locus=RLOC_00006421
Chr1	stalkie_big_nohaplotig	exon	22062011	22062086	100	+	.	Parent=comp149629_c0_seq1.mrna1;Target=comp149629_c0_seq1 1 76 +
Chr1	stalkie_big_nohaplotig	exon	22064351	22064545	96	+	.	Parent=comp149629_c0_seq1.mrna1;Target=comp149629_c0_seq1 77 273 +
Chr1	stalkie_big_nohaplotig	exon	22069333	22069356	100	+	.	Parent=comp149629_c0_seq1.mrna1;Target=comp149629_c0_seq1 274 297 +
Chr1	stalkie_big_nohaplotig	CDS	22062013	22062078	.	+	0	Parent=comp149629_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22089716	22091404	.	+	.	ID=FBgn0035867.1.mrna1;geneID=FBgn0035867.1.path1;Name=FBgn0035867.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1688;mismatches=1;indels=0;unknowns=0;Target=FBgn0035867.1 1689 1 .;locus=RLOC_00006422
Chr1	stalkie_big_nohaplotig	exon	22089716	22091404	99	+	.	Parent=FBgn0035867.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22089716	22091404	.	+	0	Parent=FBgn0035867.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22091555	22091845	.	+	.	ID=Dp_FBgn0072495.mrna1;geneID=Dp_FBgn0072495.path1;Name=Dp_FBgn0072495;Dir=indeterminatecoverage=100.0;identity=100.0;matches=291;mismatches=0;indels=0;unknowns=0;Target=Dp_FBgn0072495 291 1 .;locus=RLOC_00006422
Chr1	stalkie_big_nohaplotig	exon	22091555	22091845	100	+	.	Parent=Dp_FBgn0072495.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22091555	22091845	.	+	0	Parent=Dp_FBgn0072495.mrna1
Chr1	gffcl	locus	22085614	22086083	.	+	.	ID=RLOC_00006423;geneIDs=comp112459_c0_seq1.path1;transcripts=comp112459_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22085614	22086083	.	+	.	ID=comp112459_c0_seq1.mrna1;geneID=comp112459_c0_seq1.path1;Name=comp112459_c0_seq1;Dir=indeterminatecoverage=99.6;identity=97.5;matches=465;mismatches=5;indels=7;unknowns=0;Target=comp112459_c0_seq1 479 3 .;CDS_Target=comp112459_c0_seq1 477 379 .;locus=RLOC_00006423
Chr1	stalkie_big_nohaplotig	exon	22085614	22086083	97	+	.	Parent=comp112459_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22085990	22086081	.	+	0	Parent=comp112459_c0_seq1.mrna1
Chr1	gffcl	locus	22088955	22089356	.	+	.	ID=RLOC_00006424;geneIDs=comp135292_c2_seq1.path1;transcripts=comp135292_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22088955	22089356	.	+	.	ID=comp135292_c2_seq1.mrna1;geneID=comp135292_c2_seq1.path1;Name=comp135292_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=400;mismatches=2;indels=0;unknowns=0;Target=comp135292_c2_seq1 402 1 .;CDS_Target=comp135292_c2_seq1 288 223 .;locus=RLOC_00006424
Chr1	stalkie_big_nohaplotig	exon	22088955	22089356	99	+	.	Parent=comp135292_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22089177	22089242	.	+	0	Parent=comp135292_c2_seq1.mrna1
Chr1	gffcl	locus	22100727	22101499	.	-	.	ID=RLOC_00006425;geneIDs=FBgn0037882.1.path1;transcripts=FBgn0037882.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22100727	22101499	.	-	.	ID=FBgn0037882.1.mrna1;geneID=FBgn0037882.1.path1;Name=FBgn0037882.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=769;mismatches=4;indels=1;unknowns=0;Target=FBgn0037882.1 774 1 .;locus=RLOC_00006425
Chr1	stalkie_big_nohaplotig	exon	22100727	22101499	99	-	.	Parent=FBgn0037882.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22100727	22101499	.	-	0	Parent=FBgn0037882.1.mrna1
Chr1	gffcl	locus	22103307	22105541	.	+	.	ID=RLOC_00006426;geneIDs=FBgn0087039.1.path1;transcripts=FBgn0087039.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22103307	22105541	.	+	.	ID=FBgn0087039.1.mrna1;geneID=FBgn0087039.1.path1;Name=FBgn0087039.1;Dir=sensecoverage=100.0;identity=99.9;matches=1019;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006426
Chr1	stalkie_big_nohaplotig	exon	22103307	22103811	99	+	.	Parent=FBgn0087039.1.mrna1;Target=FBgn0087039.1 1 505 +
Chr1	stalkie_big_nohaplotig	exon	22103871	22103925	100	+	.	Parent=FBgn0087039.1.mrna1;Target=FBgn0087039.1 506 560 +
Chr1	stalkie_big_nohaplotig	exon	22104015	22104235	100	+	.	Parent=FBgn0087039.1.mrna1;Target=FBgn0087039.1 561 781 +
Chr1	stalkie_big_nohaplotig	exon	22105303	22105541	100	+	.	Parent=FBgn0087039.1.mrna1;Target=FBgn0087039.1 782 1020 +
Chr1	stalkie_big_nohaplotig	CDS	22103307	22103811	.	+	0	Parent=FBgn0087039.1.mrna1;Target=FBgn0087039.1 1 505 +
Chr1	stalkie_big_nohaplotig	CDS	22103871	22103925	.	+	2	Parent=FBgn0087039.1.mrna1;Target=FBgn0087039.1 506 560 +
Chr1	stalkie_big_nohaplotig	CDS	22104015	22104235	.	+	1	Parent=FBgn0087039.1.mrna1;Target=FBgn0087039.1 561 781 +
Chr1	stalkie_big_nohaplotig	CDS	22105303	22105541	.	+	2	Parent=FBgn0087039.1.mrna1;Target=FBgn0087039.1 782 1020 +
Chr1	gffcl	locus	22115353	22115782	.	-	.	ID=RLOC_00006428;geneIDs=comp142201_c0_seq1.path1;transcripts=comp142201_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22115353	22115782	.	-	.	ID=comp142201_c0_seq1.mrna1;geneID=comp142201_c0_seq1.path1;Name=comp142201_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=430;mismatches=0;indels=0;unknowns=0;Target=comp142201_c0_seq1 430 1 .;CDS_Target=comp142201_c0_seq1 384 307 .;locus=RLOC_00006428
Chr1	stalkie_big_nohaplotig	exon	22115353	22115782	100	-	.	Parent=comp142201_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22115399	22115476	.	-	0	Parent=comp142201_c0_seq1.mrna1
Chr1	gffcl	locus	22116972	22117688	.	-	.	ID=RLOC_00006429;geneIDs=comp150505_c0_seq1.path1;transcripts=comp150505_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22116972	22117688	.	-	.	ID=comp150505_c0_seq1.mrna1;geneID=comp150505_c0_seq1.path1;Name=comp150505_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.9;matches=716;mismatches=1;indels=0;unknowns=0;Target=comp150505_c0_seq1 721 5 .;CDS_Target=comp150505_c0_seq1 253 140 .;locus=RLOC_00006429
Chr1	stalkie_big_nohaplotig	exon	22116972	22117688	99	-	.	Parent=comp150505_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22117440	22117553	.	-	0	Parent=comp150505_c0_seq1.mrna1
Chr1	gffcl	locus	22124801	22125641	.	-	.	ID=RLOC_00006430;geneIDs=comp151482_c0_seq1.path1;transcripts=comp151482_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22124801	22125641	.	-	.	ID=comp151482_c0_seq1.mrna1;geneID=comp151482_c0_seq1.path1;Name=comp151482_c0_seq1;Dir=indeterminatecoverage=95.7;identity=99.5;matches=837;mismatches=4;indels=0;unknowns=0;Target=comp151482_c0_seq1 878 38 .;CDS_Target=comp151482_c0_seq1 219 40 .;locus=RLOC_00006430
Chr1	stalkie_big_nohaplotig	exon	22124801	22125641	99	-	.	Parent=comp151482_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22125460	22125639	.	-	0	Parent=comp151482_c0_seq1.mrna1
Chr1	gffcl	locus	22126573	22136214	.	-	.	ID=RLOC_00006431;geneIDs=FBgn0035872.1.path1;transcripts=FBgn0035872.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22126573	22136214	.	-	.	ID=FBgn0035872.1.mrna1;geneID=FBgn0035872.1.path1;Name=FBgn0035872.1;Dir=sensecoverage=100.0;identity=99.9;matches=2022;mismatches=3;indels=0;unknowns=0;locus=RLOC_00006431
Chr1	stalkie_big_nohaplotig	exon	22126573	22126744	100	-	.	Parent=FBgn0035872.1.mrna1;Target=FBgn0035872.1 1854 2025 +
Chr1	stalkie_big_nohaplotig	exon	22126818	22126883	100	-	.	Parent=FBgn0035872.1.mrna1;Target=FBgn0035872.1 1788 1853 +
Chr1	stalkie_big_nohaplotig	exon	22126975	22127022	100	-	.	Parent=FBgn0035872.1.mrna1;Target=FBgn0035872.1 1740 1787 +
Chr1	stalkie_big_nohaplotig	exon	22128000	22128287	99	-	.	Parent=FBgn0035872.1.mrna1;Target=FBgn0035872.1 1452 1739 +
Chr1	stalkie_big_nohaplotig	exon	22128354	22128829	100	-	.	Parent=FBgn0035872.1.mrna1;Target=FBgn0035872.1 976 1451 +
Chr1	stalkie_big_nohaplotig	exon	22129089	22129241	100	-	.	Parent=FBgn0035872.1.mrna1;Target=FBgn0035872.1 823 975 +
Chr1	stalkie_big_nohaplotig	exon	22135239	22135709	99	-	.	Parent=FBgn0035872.1.mrna1;Target=FBgn0035872.1 352 822 +
Chr1	stalkie_big_nohaplotig	exon	22135793	22136023	100	-	.	Parent=FBgn0035872.1.mrna1;Target=FBgn0035872.1 121 351 +
Chr1	stalkie_big_nohaplotig	exon	22136095	22136214	100	-	.	Parent=FBgn0035872.1.mrna1;Target=FBgn0035872.1 1 120 +
Chr1	stalkie_big_nohaplotig	CDS	22126573	22126744	.	-	1	Parent=FBgn0035872.1.mrna1;Target=FBgn0035872.1 1854 2025 +
Chr1	stalkie_big_nohaplotig	CDS	22126818	22126883	.	-	1	Parent=FBgn0035872.1.mrna1;Target=FBgn0035872.1 1788 1853 +
Chr1	stalkie_big_nohaplotig	CDS	22126975	22127022	.	-	1	Parent=FBgn0035872.1.mrna1;Target=FBgn0035872.1 1740 1787 +
Chr1	stalkie_big_nohaplotig	CDS	22128000	22128287	.	-	1	Parent=FBgn0035872.1.mrna1;Target=FBgn0035872.1 1452 1739 +
Chr1	stalkie_big_nohaplotig	CDS	22128354	22128829	.	-	0	Parent=FBgn0035872.1.mrna1;Target=FBgn0035872.1 976 1451 +
Chr1	stalkie_big_nohaplotig	CDS	22129089	22129241	.	-	0	Parent=FBgn0035872.1.mrna1;Target=FBgn0035872.1 823 975 +
Chr1	stalkie_big_nohaplotig	CDS	22135239	22135709	.	-	0	Parent=FBgn0035872.1.mrna1;Target=FBgn0035872.1 352 822 +
Chr1	stalkie_big_nohaplotig	CDS	22135793	22136023	.	-	0	Parent=FBgn0035872.1.mrna1;Target=FBgn0035872.1 121 351 +
Chr1	stalkie_big_nohaplotig	CDS	22136095	22136214	.	-	0	Parent=FBgn0035872.1.mrna1;Target=FBgn0035872.1 1 120 +
Chr1	gffcl	locus	22138493	22139710	.	+	.	ID=RLOC_00006432;geneIDs=FBgn0037026.1.path1;transcripts=FBgn0037026.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22138493	22139710	.	+	.	ID=FBgn0037026.1.mrna1;geneID=FBgn0037026.1.path1;Name=FBgn0037026.1;Dir=sensecoverage=100.0;identity=99.9;matches=1166;mismatches=0;indels=1;unknowns=0;Target=FBgn0037026.1 3 35 +;locus=RLOC_00006432
Chr1	stalkie_big_nohaplotig	exon	22138493	22138528	97	+	.	Parent=FBgn0037026.1.mrna1;Target=FBgn0037026.1 1 37 +
Chr1	stalkie_big_nohaplotig	exon	22138581	22139710	100	+	.	Parent=FBgn0037026.1.mrna1;Target=FBgn0037026.1 38 1167 +
Chr1	stalkie_big_nohaplotig	CDS	22138495	22138526	.	+	0	Parent=FBgn0037026.1.mrna1
Chr1	gffcl	locus	22149995	22150543	.	+	.	ID=RLOC_00006433;geneIDs=comp154952_c0_seq1.path4;transcripts=comp154952_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	22149995	22150543	.	+	.	ID=comp154952_c0_seq1.mrna4;geneID=comp154952_c0_seq1.path4;Name=comp154952_c0_seq1;Dir=indeterminatecoverage=92.7;identity=99.3;matches=545;mismatches=4;indels=0;unknowns=0;Target=comp154952_c0_seq1 567 19 .;CDS_Target=comp154952_c0_seq1 497 390 .;locus=RLOC_00006433
Chr1	stalkie_big_nohaplotig	exon	22149995	22150543	99	+	.	Parent=comp154952_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	22150366	22150473	.	+	0	Parent=comp154952_c0_seq1.mrna4
Chr1	gffcl	locus	22153479	22154027	.	+	.	ID=RLOC_00006434;geneIDs=comp154952_c0_seq1.path5;transcripts=comp154952_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	22153479	22154027	.	+	.	ID=comp154952_c0_seq1.mrna5;geneID=comp154952_c0_seq1.path5;Name=comp154952_c0_seq1;Dir=indeterminatecoverage=92.7;identity=99.3;matches=545;mismatches=4;indels=0;unknowns=0;Target=comp154952_c0_seq1 567 19 .;CDS_Target=comp154952_c0_seq1 497 390 .;locus=RLOC_00006434
Chr1	stalkie_big_nohaplotig	exon	22153479	22154027	99	+	.	Parent=comp154952_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	22153850	22153957	.	+	0	Parent=comp154952_c0_seq1.mrna5
Chr1	gffcl	locus	22166512	22166596	.	-	.	ID=RLOC_00006435;geneIDs=FBgn0035397.1.path1;transcripts=FBgn0035397.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22166512	22166596	.	-	.	ID=FBgn0035397.1.mrna1;geneID=FBgn0035397.1.path1;Name=FBgn0035397.1;Dir=indeterminatecoverage=3.9;identity=100.0;matches=85;mismatches=0;indels=0;unknowns=0;Target=FBgn0035397.1 85 1 .;locus=RLOC_00006435
Chr1	stalkie_big_nohaplotig	exon	22166512	22166596	100	-	.	Parent=FBgn0035397.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22166512	22166596	.	-	0	Parent=FBgn0035397.1.mrna1
Chr1	gffcl	locus	22167465	22167533	.	+	.	ID=RLOC_00006436;geneIDs=comp150837_c0_seq1.path1;transcripts=comp150837_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22167465	22167533	.	+	.	ID=comp150837_c0_seq1.mrna1;geneID=comp150837_c0_seq1.path1;Name=comp150837_c0_seq1;Dir=indeterminatecoverage=8.8;identity=89.9;matches=62;mismatches=7;indels=0;unknowns=0;Target=comp150837_c0_seq1 69 1 .;locus=RLOC_00006436
Chr1	stalkie_big_nohaplotig	exon	22167465	22167533	89	+	.	Parent=comp150837_c0_seq1.mrna1
Chr1	gffcl	locus	22176030	22176557	.	-	.	ID=RLOC_00006437;geneIDs=comp147885_c0_seq1.path1;transcripts=comp147885_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22176030	22176557	.	-	.	ID=comp147885_c0_seq1.mrna1;geneID=comp147885_c0_seq1.path1;Name=comp147885_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=526;mismatches=0;indels=2;unknowns=0;Target=comp147885_c0_seq1 526 1 .;CDS_Target=comp147885_c0_seq1 93 1 .;locus=RLOC_00006437
Chr1	stalkie_big_nohaplotig	exon	22176030	22176557	99	-	.	Parent=comp147885_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22176463	22176557	.	-	0	Parent=comp147885_c0_seq1.mrna1
Chr1	gffcl	locus	22176563	22176953	.	-	.	ID=RLOC_00006438;geneIDs=comp159974_c1_seq1.path1;transcripts=comp159974_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22176563	22176953	.	-	.	ID=comp159974_c1_seq1.mrna1;geneID=comp159974_c1_seq1.path1;Name=comp159974_c1_seq1;Dir=indeterminatecoverage=97.0;identity=95.0;matches=379;mismatches=4;indels=16;unknowns=0;Target=comp159974_c1_seq1 403 13 .;CDS_Target=comp159974_c1_seq1 148 116 .;locus=RLOC_00006438
Chr1	stalkie_big_nohaplotig	exon	22176563	22176953	94	-	.	Parent=comp159974_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22176818	22176850	.	-	0	Parent=comp159974_c1_seq1.mrna1
Chr1	gffcl	locus	22177887	22179190	.	+	.	ID=RLOC_00006439;geneIDs=comp162209_c0_seq1.path1;transcripts=comp162209_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22177887	22179190	.	+	.	ID=comp162209_c0_seq1.mrna1;geneID=comp162209_c0_seq1.path1;Name=comp162209_c0_seq1;Dir=indeterminatecoverage=99.2;identity=94.7;matches=1243;mismatches=48;indels=21;unknowns=0;Target=comp162209_c0_seq1 1299 1 .;CDS_Target=comp162209_c0_seq1 102 1 .;locus=RLOC_00006439
Chr1	stalkie_big_nohaplotig	exon	22177887	22179190	94	+	.	Parent=comp162209_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22177887	22177990	.	+	0	Parent=comp162209_c0_seq1.mrna1
Chr1	gffcl	locus	22179220	22179703	.	+	.	ID=RLOC_00006440;geneIDs=comp160526_c0_seq1.path1;transcripts=comp160526_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22179220	22179703	.	+	.	ID=comp160526_c0_seq1.mrna1;geneID=comp160526_c0_seq1.path1;Name=comp160526_c0_seq1;Dir=indeterminatecoverage=99.4;identity=93.5;matches=462;mismatches=22;indels=10;unknowns=0;Target=comp160526_c0_seq1 497 4 .;CDS_Target=comp160526_c0_seq1 121 5 .;locus=RLOC_00006440
Chr1	stalkie_big_nohaplotig	exon	22179220	22179703	93	+	.	Parent=comp160526_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22179221	22179337	.	+	0	Parent=comp160526_c0_seq1.mrna1
Chr1	gffcl	locus	22180496	22181905	.	-	.	ID=RLOC_00006441;geneIDs=FBgn0035538.1.path1;transcripts=FBgn0035538.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22180496	22181905	.	-	.	ID=FBgn0035538.1.mrna1;geneID=FBgn0035538.1.path1;Name=FBgn0035538.1;Dir=sensecoverage=100.0;identity=99.4;matches=981;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006441
Chr1	stalkie_big_nohaplotig	exon	22180496	22181078	99	-	.	Parent=FBgn0035538.1.mrna1;Target=FBgn0035538.1 405 987 +
Chr1	stalkie_big_nohaplotig	exon	22181154	22181230	98	-	.	Parent=FBgn0035538.1.mrna1;Target=FBgn0035538.1 328 404 +
Chr1	stalkie_big_nohaplotig	exon	22181301	22181482	100	-	.	Parent=FBgn0035538.1.mrna1;Target=FBgn0035538.1 146 327 +
Chr1	stalkie_big_nohaplotig	exon	22181761	22181905	100	-	.	Parent=FBgn0035538.1.mrna1;Target=FBgn0035538.1 1 145 +
Chr1	stalkie_big_nohaplotig	CDS	22180496	22181078	.	-	1	Parent=FBgn0035538.1.mrna1;Target=FBgn0035538.1 405 987 +
Chr1	stalkie_big_nohaplotig	CDS	22181154	22181230	.	-	0	Parent=FBgn0035538.1.mrna1;Target=FBgn0035538.1 328 404 +
Chr1	stalkie_big_nohaplotig	CDS	22181301	22181482	.	-	2	Parent=FBgn0035538.1.mrna1;Target=FBgn0035538.1 146 327 +
Chr1	stalkie_big_nohaplotig	CDS	22181761	22181905	.	-	0	Parent=FBgn0035538.1.mrna1;Target=FBgn0035538.1 1 145 +
Chr1	gffcl	locus	22186901	22214729	.	-	.	ID=RLOC_00006442;geneIDs=comp150295_c0_seq1.path1;transcripts=comp150295_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22186901	22214729	.	-	.	ID=comp150295_c0_seq1.mrna1;geneID=comp150295_c0_seq1.path1;Name=comp150295_c0_seq1;Dir=sensecoverage=99.2;identity=99.3;matches=711;mismatches=4;indels=1;unknowns=0;locus=RLOC_00006442
Chr1	stalkie_big_nohaplotig	exon	22186901	22187235	100	-	.	Parent=comp150295_c0_seq1.mrna1;Target=comp150295_c0_seq1 388 722 +
Chr1	stalkie_big_nohaplotig	exon	22214290	22214599	98	-	.	Parent=comp150295_c0_seq1.mrna1;Target=comp150295_c0_seq1 77 387 +
Chr1	stalkie_big_nohaplotig	exon	22214660	22214729	98	-	.	Parent=comp150295_c0_seq1.mrna1;Target=comp150295_c0_seq1 7 76 +
Chr1	stalkie_big_nohaplotig	CDS	22187156	22187235	.	-	2	Parent=comp150295_c0_seq1.mrna1;Target=comp150295_c0_seq1 388 467 +
Chr1	stalkie_big_nohaplotig	CDS	22214290	22214302	.	-	0	Parent=comp150295_c0_seq1.mrna1;Target=comp150295_c0_seq1 375 387 +
Chr1	gffcl	locus	22221634	22222138	.	+	.	ID=RLOC_00006443;geneIDs=comp151223_c0_seq1.path1;transcripts=comp151223_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22221634	22222138	.	+	.	ID=comp151223_c0_seq1.mrna1;geneID=comp151223_c0_seq1.path1;Name=comp151223_c0_seq1;Dir=antisensecoverage=95.4;identity=98.9;matches=430;mismatches=5;indels=0;unknowns=0;locus=RLOC_00006443
Chr1	stalkie_big_nohaplotig	exon	22221634	22221827	100	+	.	Parent=comp151223_c0_seq1.mrna1;Target=comp151223_c0_seq1 262 455 -
Chr1	stalkie_big_nohaplotig	exon	22221898	22222138	97	+	.	Parent=comp151223_c0_seq1.mrna1;Target=comp151223_c0_seq1 21 261 -
Chr1	stalkie_big_nohaplotig	CDS	22221771	22221827	.	+	0	Parent=comp151223_c0_seq1.mrna1;Target=comp151223_c0_seq1 262 318 .
Chr1	stalkie_big_nohaplotig	CDS	22221898	22222062	.	+	0	Parent=comp151223_c0_seq1.mrna1;Target=comp151223_c0_seq1 97 261 .
Chr1	gffcl	locus	22229910	22230798	.	-	.	ID=RLOC_00006444;geneIDs=comp158470_c1_seq1.path1;transcripts=comp158470_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22229910	22230798	.	-	.	ID=comp158470_c1_seq1.mrna1;geneID=comp158470_c1_seq1.path1;Name=comp158470_c1_seq1;Dir=antisensecoverage=97.0;identity=98.2;matches=691;mismatches=12;indels=1;unknowns=0;locus=RLOC_00006444
Chr1	stalkie_big_nohaplotig	exon	22229910	22230207	95	-	.	Parent=comp158470_c1_seq1.mrna1;Target=comp158470_c1_seq1 23 321 -
Chr1	stalkie_big_nohaplotig	exon	22230271	22230408	100	-	.	Parent=comp158470_c1_seq1.mrna1;Target=comp158470_c1_seq1 322 459 -
Chr1	stalkie_big_nohaplotig	exon	22230464	22230606	100	-	.	Parent=comp158470_c1_seq1.mrna1;Target=comp158470_c1_seq1 460 602 -
Chr1	stalkie_big_nohaplotig	exon	22230675	22230798	99	-	.	Parent=comp158470_c1_seq1.mrna1;Target=comp158470_c1_seq1 603 726 -
Chr1	stalkie_big_nohaplotig	CDS	22230051	22230207	.	-	1	Parent=comp158470_c1_seq1.mrna1;Target=comp158470_c1_seq1 165 321 .
Chr1	stalkie_big_nohaplotig	CDS	22230271	22230408	.	-	1	Parent=comp158470_c1_seq1.mrna1;Target=comp158470_c1_seq1 322 459 .
Chr1	stalkie_big_nohaplotig	CDS	22230464	22230606	.	-	0	Parent=comp158470_c1_seq1.mrna1;Target=comp158470_c1_seq1 460 602 .
Chr1	stalkie_big_nohaplotig	CDS	22230675	22230797	.	-	0	Parent=comp158470_c1_seq1.mrna1;Target=comp158470_c1_seq1 603 725 .
Chr1	gffcl	locus	22271964	22272852	.	+	.	ID=RLOC_00006445;geneIDs=comp158470_c1_seq1.path2;transcripts=comp158470_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	22271964	22272852	.	+	.	ID=comp158470_c1_seq1.mrna2;geneID=comp158470_c1_seq1.path2;Name=comp158470_c1_seq1;Dir=antisensecoverage=97.0;identity=98.2;matches=691;mismatches=12;indels=1;unknowns=0;locus=RLOC_00006445
Chr1	stalkie_big_nohaplotig	exon	22271964	22272087	99	+	.	Parent=comp158470_c1_seq1.mrna2;Target=comp158470_c1_seq1 603 726 -
Chr1	stalkie_big_nohaplotig	exon	22272156	22272298	100	+	.	Parent=comp158470_c1_seq1.mrna2;Target=comp158470_c1_seq1 460 602 -
Chr1	stalkie_big_nohaplotig	exon	22272354	22272491	100	+	.	Parent=comp158470_c1_seq1.mrna2;Target=comp158470_c1_seq1 322 459 -
Chr1	stalkie_big_nohaplotig	exon	22272555	22272852	95	+	.	Parent=comp158470_c1_seq1.mrna2;Target=comp158470_c1_seq1 23 321 -
Chr1	stalkie_big_nohaplotig	CDS	22271965	22272087	.	+	0	Parent=comp158470_c1_seq1.mrna2;Target=comp158470_c1_seq1 603 725 .
Chr1	stalkie_big_nohaplotig	CDS	22272156	22272298	.	+	0	Parent=comp158470_c1_seq1.mrna2;Target=comp158470_c1_seq1 460 602 .
Chr1	stalkie_big_nohaplotig	CDS	22272354	22272491	.	+	1	Parent=comp158470_c1_seq1.mrna2;Target=comp158470_c1_seq1 322 459 .
Chr1	stalkie_big_nohaplotig	CDS	22272555	22272711	.	+	1	Parent=comp158470_c1_seq1.mrna2;Target=comp158470_c1_seq1 165 321 .
Chr1	gffcl	locus	22318307	22319615	.	+	.	ID=RLOC_00006447;geneIDs=FBgn0035540.1.path1,comp160712_c0_seq1.path1;transcripts=FBgn0035540.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22318583	22319615	.	+	.	ID=FBgn0035540.1.mrna1;geneID=FBgn0035540.1.path1;Name=FBgn0035540.1;Dir=sensecoverage=100.0;identity=99.2;matches=949;mismatches=8;indels=0;unknowns=3;locus=RLOC_00006447
Chr1	stalkie_big_nohaplotig	exon	22318583	22318958	98	+	.	Parent=FBgn0035540.1.mrna1;Target=FBgn0035540.1 1 376 +
Chr1	stalkie_big_nohaplotig	exon	22319032	22319615	99	+	.	Parent=FBgn0035540.1.mrna1;Target=FBgn0035540.1 377 960 +
Chr1	stalkie_big_nohaplotig	CDS	22318583	22318958	.	+	0	Parent=FBgn0035540.1.mrna1;Target=FBgn0035540.1 1 376 +
Chr1	stalkie_big_nohaplotig	CDS	22319032	22319615	.	+	2	Parent=FBgn0035540.1.mrna1;Target=FBgn0035540.1 377 960 +
Chr1	gffcl	locus	22323781	22324294	.	-	.	ID=RLOC_00006448;geneIDs=FBgn0035541.1.path1;transcripts=FBgn0035541.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22323781	22324294	.	-	.	ID=FBgn0035541.1.mrna1;geneID=FBgn0035541.1.path1;Name=FBgn0035541.1;Dir=sensecoverage=100.0;identity=99.1;matches=446;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006448
Chr1	stalkie_big_nohaplotig	exon	22323781	22324032	99	-	.	Parent=FBgn0035541.1.mrna1;Target=FBgn0035541.1 199 450 +
Chr1	stalkie_big_nohaplotig	exon	22324097	22324294	98	-	.	Parent=FBgn0035541.1.mrna1;Target=FBgn0035541.1 1 198 +
Chr1	stalkie_big_nohaplotig	CDS	22323781	22324032	.	-	0	Parent=FBgn0035541.1.mrna1;Target=FBgn0035541.1 199 450 +
Chr1	stalkie_big_nohaplotig	CDS	22324097	22324294	.	-	0	Parent=FBgn0035541.1.mrna1;Target=FBgn0035541.1 1 198 +
Chr1	gffcl	locus	22330884	22384386	.	+	.	ID=RLOC_00006449;geneIDs=comp134751_c0_seq1.path1,comp151693_c0_seq1.path1;transcripts=comp151693_c0_seq1.mrna1,comp134751_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22330884	22384386	.	+	.	ID=comp151693_c0_seq1.mrna1;geneID=comp151693_c0_seq1.path1;Name=comp151693_c0_seq1;Dir=antisensecoverage=100.0;identity=98.8;matches=318;mismatches=2;indels=2;unknowns=0;Target=comp151693_c0_seq1 289 321 .;locus=RLOC_00006449
Chr1	stalkie_big_nohaplotig	exon	22330884	22331158	98	+	.	Parent=comp151693_c0_seq1.mrna1;Target=comp151693_c0_seq1 47 321 -
Chr1	stalkie_big_nohaplotig	exon	22384341	22384386	97	+	.	Parent=comp151693_c0_seq1.mrna1;Target=comp151693_c0_seq1 1 46 -
Chr1	stalkie_big_nohaplotig	CDS	22330884	22330916	.	+	0	Parent=comp151693_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22364355	22384364	.	+	.	ID=comp134751_c0_seq1.mrna1;geneID=comp134751_c0_seq1.path1;Name=comp134751_c0_seq1;Dir=antisensecoverage=97.3;identity=99.4;matches=324;mismatches=2;indels=0;unknowns=0;Target=comp134751_c0_seq1 219 335 .;locus=RLOC_00006449
Chr1	stalkie_big_nohaplotig	exon	22364355	22364656	99	+	.	Parent=comp134751_c0_seq1.mrna1;Target=comp134751_c0_seq1 34 335 -
Chr1	stalkie_big_nohaplotig	exon	22377826	22377827	100	+	.	Parent=comp134751_c0_seq1.mrna1;Target=comp134751_c0_seq1 32 33 -
Chr1	stalkie_big_nohaplotig	exon	22382850	22382851	100	+	.	Parent=comp134751_c0_seq1.mrna1;Target=comp134751_c0_seq1 30 31 -
Chr1	stalkie_big_nohaplotig	exon	22384345	22384364	95	+	.	Parent=comp134751_c0_seq1.mrna1;Target=comp134751_c0_seq1 10 29 -
Chr1	stalkie_big_nohaplotig	CDS	22364355	22364471	.	+	0	Parent=comp134751_c0_seq1.mrna1
Chr1	gffcl	locus	22336179	22390521	.	+	.	ID=RLOC_00006450;geneIDs=comp145832_c0_seq1.path1,comp154588_c0_seq1.path1;transcripts=comp154588_c0_seq1.mrna1,comp145832_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22336179	22390521	.	+	.	ID=comp154588_c0_seq1.mrna1;geneID=comp154588_c0_seq1.path1;Name=comp154588_c0_seq1;Dir=indeterminatecoverage=56.3;identity=96.8;matches=274;mismatches=9;indels=0;unknowns=0;locus=RLOC_00006450
Chr1	stalkie_big_nohaplotig	exon	22336179	22336185	100	+	.	Parent=comp154588_c0_seq1.mrna1;Target=comp154588_c0_seq1 227 221 .
Chr1	stalkie_big_nohaplotig	exon	22338211	22338213	100	+	.	Parent=comp154588_c0_seq1.mrna1;Target=comp154588_c0_seq1 230 228 .
Chr1	stalkie_big_nohaplotig	exon	22387072	22387075	100	+	.	Parent=comp154588_c0_seq1.mrna1;Target=comp154588_c0_seq1 234 231 .
Chr1	stalkie_big_nohaplotig	exon	22390253	22390521	96	+	.	Parent=comp154588_c0_seq1.mrna1;Target=comp154588_c0_seq1 503 235 .
Chr1	stalkie_big_nohaplotig	CDS	22336180	22336185	.	+	0	Parent=comp154588_c0_seq1.mrna1;Target=comp154588_c0_seq1 227 222 .
Chr1	stalkie_big_nohaplotig	CDS	22338211	22338213	.	+	0	Parent=comp154588_c0_seq1.mrna1;Target=comp154588_c0_seq1 230 228 .
Chr1	stalkie_big_nohaplotig	CDS	22387072	22387075	.	+	0	Parent=comp154588_c0_seq1.mrna1;Target=comp154588_c0_seq1 234 231 .
Chr1	stalkie_big_nohaplotig	CDS	22390253	22390344	.	+	2	Parent=comp154588_c0_seq1.mrna1;Target=comp154588_c0_seq1 326 235 .
Chr1	stalkie_big_nohaplotig	mRNA	22386742	22387276	.	+	.	ID=comp145832_c0_seq1.mrna1;geneID=comp145832_c0_seq1.path1;Name=comp145832_c0_seq1;Dir=indeterminatecoverage=99.3;identity=98.9;matches=531;mismatches=4;indels=2;unknowns=0;Target=comp145832_c0_seq1 541 5 .;CDS_Target=comp145832_c0_seq1 324 205 .;locus=RLOC_00006450
Chr1	stalkie_big_nohaplotig	exon	22386742	22387276	98	+	.	Parent=comp145832_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22386942	22387061	.	+	0	Parent=comp145832_c0_seq1.mrna1
Chr1	gffcl	locus	22364111	22370230	.	+	.	ID=RLOC_00006451;geneIDs=comp209428_c0_seq1.path1;transcripts=comp209428_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22364111	22370230	.	+	.	ID=comp209428_c0_seq1.mrna1;geneID=comp209428_c0_seq1.path1;Name=comp209428_c0_seq1;Dir=sensecoverage=95.6;identity=97.7;matches=215;mismatches=2;indels=3;unknowns=0;Target=comp209428_c0_seq1 12 104 +;locus=RLOC_00006451
Chr1	stalkie_big_nohaplotig	exon	22364111	22364306	97	+	.	Parent=comp209428_c0_seq1.mrna1;Target=comp209428_c0_seq1 11 207 +
Chr1	stalkie_big_nohaplotig	exon	22370209	22370230	100	+	.	Parent=comp209428_c0_seq1.mrna1;Target=comp209428_c0_seq1 208 229 +
Chr1	stalkie_big_nohaplotig	CDS	22364112	22364203	.	+	0	Parent=comp209428_c0_seq1.mrna1
Chr1	gffcl	locus	22384461	22386251	.	+	.	ID=RLOC_00006452;geneIDs=FBgn0035542.1.path1;transcripts=FBgn0035542.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22384461	22386251	.	+	.	ID=FBgn0035542.1.mrna1;geneID=FBgn0035542.1.path1;Name=FBgn0035542.1;Dir=sensecoverage=100.0;identity=100.0;matches=1401;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006452
Chr1	stalkie_big_nohaplotig	exon	22384461	22384971	100	+	.	Parent=FBgn0035542.1.mrna1;Target=FBgn0035542.1 1 511 +
Chr1	stalkie_big_nohaplotig	exon	22385039	22385531	100	+	.	Parent=FBgn0035542.1.mrna1;Target=FBgn0035542.1 512 1004 +
Chr1	stalkie_big_nohaplotig	exon	22385726	22385855	100	+	.	Parent=FBgn0035542.1.mrna1;Target=FBgn0035542.1 1005 1134 +
Chr1	stalkie_big_nohaplotig	exon	22385927	22386034	100	+	.	Parent=FBgn0035542.1.mrna1;Target=FBgn0035542.1 1135 1242 +
Chr1	stalkie_big_nohaplotig	exon	22386093	22386251	100	+	.	Parent=FBgn0035542.1.mrna1;Target=FBgn0035542.1 1243 1401 +
Chr1	stalkie_big_nohaplotig	CDS	22384461	22384971	.	+	0	Parent=FBgn0035542.1.mrna1;Target=FBgn0035542.1 1 511 +
Chr1	stalkie_big_nohaplotig	CDS	22385039	22385531	.	+	2	Parent=FBgn0035542.1.mrna1;Target=FBgn0035542.1 512 1004 +
Chr1	stalkie_big_nohaplotig	CDS	22385726	22385855	.	+	1	Parent=FBgn0035542.1.mrna1;Target=FBgn0035542.1 1005 1134 +
Chr1	stalkie_big_nohaplotig	CDS	22385927	22386034	.	+	0	Parent=FBgn0035542.1.mrna1;Target=FBgn0035542.1 1135 1242 +
Chr1	stalkie_big_nohaplotig	CDS	22386093	22386251	.	+	0	Parent=FBgn0035542.1.mrna1;Target=FBgn0035542.1 1243 1401 +
Chr1	gffcl	locus	22390682	22390883	.	-	.	ID=RLOC_00006453;geneIDs=comp158431_c0_seq1.path1;transcripts=comp158431_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22390682	22390883	.	-	.	ID=comp158431_c0_seq1.mrna1;geneID=comp158431_c0_seq1.path1;Name=comp158431_c0_seq1;Dir=indeterminatecoverage=27.9;identity=84.7;matches=171;mismatches=27;indels=4;unknowns=0;Target=comp158431_c0_seq1 220 23 .;CDS_Target=comp158431_c0_seq1 144 91 .;locus=RLOC_00006453
Chr1	stalkie_big_nohaplotig	exon	22390682	22390883	84	-	.	Parent=comp158431_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22390760	22390815	.	-	0	Parent=comp158431_c0_seq1.mrna1
Chr1	gffcl	locus	22430764	22433659	.	-	.	ID=RLOC_00006454;geneIDs=comp152124_c0_seq1.path1;transcripts=comp152124_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22430764	22433659	.	-	.	ID=comp152124_c0_seq1.mrna1;geneID=comp152124_c0_seq1.path1;Name=comp152124_c0_seq1;Dir=sensecoverage=98.9;identity=98.9;matches=790;mismatches=9;indels=0;unknowns=0;locus=RLOC_00006454
Chr1	stalkie_big_nohaplotig	exon	22430764	22431258	98	-	.	Parent=comp152124_c0_seq1.mrna1;Target=comp152124_c0_seq1 305 799 +
Chr1	stalkie_big_nohaplotig	exon	22433356	22433659	100	-	.	Parent=comp152124_c0_seq1.mrna1;Target=comp152124_c0_seq1 1 304 +
Chr1	stalkie_big_nohaplotig	CDS	22430764	22431258	.	-	0	Parent=comp152124_c0_seq1.mrna1;Target=comp152124_c0_seq1 305 799 +
Chr1	stalkie_big_nohaplotig	CDS	22433356	22433358	.	-	0	Parent=comp152124_c0_seq1.mrna1;Target=comp152124_c0_seq1 302 304 +
Chr1	gffcl	locus	22437188	22441443	.	-	.	ID=RLOC_00006455;geneIDs=FBgn0000038.1.path1;transcripts=FBgn0000038.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22437188	22441443	.	-	.	ID=FBgn0000038.1.mrna1;geneID=FBgn0000038.1.path1;Name=FBgn0000038.1;Dir=sensecoverage=100.0;identity=99.6;matches=1539;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006455
Chr1	stalkie_big_nohaplotig	exon	22437188	22437349	99	-	.	Parent=FBgn0000038.1.mrna1;Target=FBgn0000038.1 1384 1545 +
Chr1	stalkie_big_nohaplotig	exon	22437467	22437701	99	-	.	Parent=FBgn0000038.1.mrna1;Target=FBgn0000038.1 1149 1383 +
Chr1	stalkie_big_nohaplotig	exon	22439600	22439964	100	-	.	Parent=FBgn0000038.1.mrna1;Target=FBgn0000038.1 784 1148 +
Chr1	stalkie_big_nohaplotig	exon	22440022	22440466	99	-	.	Parent=FBgn0000038.1.mrna1;Target=FBgn0000038.1 339 783 +
Chr1	stalkie_big_nohaplotig	exon	22440637	22440791	99	-	.	Parent=FBgn0000038.1.mrna1;Target=FBgn0000038.1 184 338 +
Chr1	stalkie_big_nohaplotig	exon	22441261	22441443	98	-	.	Parent=FBgn0000038.1.mrna1;Target=FBgn0000038.1 1 183 +
Chr1	stalkie_big_nohaplotig	CDS	22437188	22437349	.	-	0	Parent=FBgn0000038.1.mrna1;Target=FBgn0000038.1 1384 1545 +
Chr1	stalkie_big_nohaplotig	CDS	22437467	22437701	.	-	1	Parent=FBgn0000038.1.mrna1;Target=FBgn0000038.1 1149 1383 +
Chr1	stalkie_big_nohaplotig	CDS	22439600	22439964	.	-	0	Parent=FBgn0000038.1.mrna1;Target=FBgn0000038.1 784 1148 +
Chr1	stalkie_big_nohaplotig	CDS	22440022	22440466	.	-	1	Parent=FBgn0000038.1.mrna1;Target=FBgn0000038.1 339 783 +
Chr1	stalkie_big_nohaplotig	CDS	22440637	22440791	.	-	0	Parent=FBgn0000038.1.mrna1;Target=FBgn0000038.1 184 338 +
Chr1	stalkie_big_nohaplotig	CDS	22441261	22441443	.	-	0	Parent=FBgn0000038.1.mrna1;Target=FBgn0000038.1 1 183 +
Chr1	gffcl	locus	22442502	22443527	.	+	.	ID=RLOC_00006456;geneIDs=comp153966_c0_seq1.path1;transcripts=comp153966_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22442502	22443527	.	+	.	ID=comp153966_c0_seq1.mrna1;geneID=comp153966_c0_seq1.path1;Name=comp153966_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.9;matches=966;mismatches=42;indels=21;unknowns=0;Target=comp153966_c0_seq1 1011 1 .;CDS_Target=comp153966_c0_seq1 420 388 .;locus=RLOC_00006456
Chr1	stalkie_big_nohaplotig	exon	22442502	22443527	93	+	.	Parent=comp153966_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22442899	22442931	.	+	0	Parent=comp153966_c0_seq1.mrna1
Chr1	gffcl	locus	22443705	22444366	.	-	.	ID=RLOC_00006457;geneIDs=comp148368_c0_seq1.path1;transcripts=comp148368_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22443705	22444366	.	-	.	ID=comp148368_c0_seq1.mrna1;geneID=comp148368_c0_seq1.path1;Name=comp148368_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=661;mismatches=1;indels=0;unknowns=0;Target=comp148368_c0_seq1 662 1 .;CDS_Target=comp148368_c0_seq1 595 341 .;locus=RLOC_00006457
Chr1	stalkie_big_nohaplotig	exon	22443705	22444366	99	-	.	Parent=comp148368_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22443772	22444026	.	-	0	Parent=comp148368_c0_seq1.mrna1
Chr1	gffcl	locus	22444382	22444812	.	-	.	ID=RLOC_00006458;geneIDs=comp135368_c0_seq1.path1;transcripts=comp135368_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22444382	22444812	.	-	.	ID=comp135368_c0_seq1.mrna1;geneID=comp135368_c0_seq1.path1;Name=comp135368_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=426;mismatches=5;indels=3;unknowns=0;Target=comp135368_c0_seq1 434 1 .;CDS_Target=comp135368_c0_seq1 86 3 .;locus=RLOC_00006458
Chr1	stalkie_big_nohaplotig	exon	22444382	22444812	98	-	.	Parent=comp135368_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22444730	22444810	.	-	0	Parent=comp135368_c0_seq1.mrna1
Chr1	gffcl	locus	22451624	22452267	.	-	.	ID=RLOC_00006459;geneIDs=comp145979_c0_seq1.path2;transcripts=comp145979_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	22451624	22452267	.	-	.	ID=comp145979_c0_seq1.mrna2;geneID=comp145979_c0_seq1.path2;Name=comp145979_c0_seq1;Dir=antisensecoverage=87.0;identity=99.5;matches=567;mismatches=3;indels=0;unknowns=0;locus=RLOC_00006459
Chr1	stalkie_big_nohaplotig	exon	22451624	22451812	100	-	.	Parent=comp145979_c0_seq1.mrna2;Target=comp145979_c0_seq1 74 262 -
Chr1	stalkie_big_nohaplotig	exon	22451887	22452267	99	-	.	Parent=comp145979_c0_seq1.mrna2;Target=comp145979_c0_seq1 263 643 -
Chr1	gffcl	locus	22488732	22491596	.	+	.	ID=RLOC_00006460;geneIDs=comp151921_c1_seq1.path1;transcripts=comp151921_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22488732	22491596	.	+	.	ID=comp151921_c1_seq1.mrna1;geneID=comp151921_c1_seq1.path1;Name=comp151921_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=445;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006460
Chr1	stalkie_big_nohaplotig	exon	22488732	22488947	99	+	.	Parent=comp151921_c1_seq1.mrna1;Target=comp151921_c1_seq1 216 1 .
Chr1	stalkie_big_nohaplotig	exon	22491366	22491596	99	+	.	Parent=comp151921_c1_seq1.mrna1;Target=comp151921_c1_seq1 447 217 .
Chr1	stalkie_big_nohaplotig	CDS	22488734	22488947	.	+	0	Parent=comp151921_c1_seq1.mrna1;Target=comp151921_c1_seq1 216 3 .
Chr1	stalkie_big_nohaplotig	CDS	22491366	22491388	.	+	2	Parent=comp151921_c1_seq1.mrna1;Target=comp151921_c1_seq1 239 217 .
Chr1	gffcl	locus	22489080	22489609	.	-	.	ID=RLOC_00006461;geneIDs=comp115091_c0_seq1.path1;transcripts=comp115091_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22489080	22489609	.	-	.	ID=comp115091_c0_seq1.mrna1;geneID=comp115091_c0_seq1.path1;Name=comp115091_c0_seq1;Dir=sensecoverage=100.0;identity=87.0;matches=403;mismatches=54;indels=6;unknowns=0;locus=RLOC_00006461
Chr1	stalkie_big_nohaplotig	exon	22489080	22489508	86	-	.	Parent=comp115091_c0_seq1.mrna1;Target=comp115091_c0_seq1 35 457 +
Chr1	stalkie_big_nohaplotig	exon	22489576	22489609	100	-	.	Parent=comp115091_c0_seq1.mrna1;Target=comp115091_c0_seq1 1 34 +
Chr1	stalkie_big_nohaplotig	CDS	22489080	22489508	.	-	0	Parent=comp115091_c0_seq1.mrna1;Target=comp115091_c0_seq1 35 457 +
Chr1	stalkie_big_nohaplotig	CDS	22489576	22489578	.	-	0	Parent=comp115091_c0_seq1.mrna1;Target=comp115091_c0_seq1 32 34 +
Chr1	gffcl	locus	22516248	22516434	.	-	.	ID=RLOC_00006462;geneIDs=ORF571.path2;transcripts=ORF571.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	22516248	22516434	.	-	.	ID=ORF571.mrna2;geneID=ORF571.path2;Name=ORF571;Dir=indeterminatecoverage=11.4;identity=100.0;matches=187;mismatches=0;indels=0;unknowns=0;Target=ORF571 1644 1458 .;locus=RLOC_00006462
Chr1	stalkie_big_nohaplotig	exon	22516248	22516434	100	-	.	Parent=ORF571.mrna2
Chr1	stalkie_big_nohaplotig	CDS	22516248	22516434	.	-	2	Parent=ORF571.mrna2
Chr1	gffcl	locus	22519924	22520889	.	+	.	ID=RLOC_00006463;geneIDs=comp154905_c0_seq1.path1;transcripts=comp154905_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22519924	22520889	.	+	.	ID=comp154905_c0_seq1.mrna1;geneID=comp154905_c0_seq1.path1;Name=comp154905_c0_seq1;Dir=antisensecoverage=99.8;identity=97.6;matches=878;mismatches=18;indels=4;unknowns=0;locus=RLOC_00006463
Chr1	stalkie_big_nohaplotig	exon	22519924	22520408	96	+	.	Parent=comp154905_c0_seq1.mrna1;Target=comp154905_c0_seq1 417 902 -
Chr1	stalkie_big_nohaplotig	exon	22520479	22520889	98	+	.	Parent=comp154905_c0_seq1.mrna1;Target=comp154905_c0_seq1 3 416 -
Chr1	stalkie_big_nohaplotig	CDS	22520029	22520408	.	+	0	Parent=comp154905_c0_seq1.mrna1;Target=comp154905_c0_seq1 417 797 .
Chr1	stalkie_big_nohaplotig	CDS	22520479	22520610	.	+	1	Parent=comp154905_c0_seq1.mrna1;Target=comp154905_c0_seq1 285 416 .
Chr1	gffcl	locus	22549234	22553222	.	+	.	ID=RLOC_00006464;geneIDs=comp118593_c1_seq1.path1;transcripts=comp118593_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22549234	22553222	.	+	.	ID=comp118593_c1_seq1.mrna1;geneID=comp118593_c1_seq1.path1;Name=comp118593_c1_seq1;Dir=antisensecoverage=99.0;identity=99.5;matches=865;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006464
Chr1	stalkie_big_nohaplotig	exon	22549234	22549257	100	+	.	Parent=comp118593_c1_seq1.mrna1;Target=comp118593_c1_seq1 846 869 -
Chr1	stalkie_big_nohaplotig	exon	22552378	22553222	99	+	.	Parent=comp118593_c1_seq1.mrna1;Target=comp118593_c1_seq1 1 845 -
Chr1	stalkie_big_nohaplotig	CDS	22549234	22549257	.	+	0	Parent=comp118593_c1_seq1.mrna1;Target=comp118593_c1_seq1 846 869 .
Chr1	stalkie_big_nohaplotig	CDS	22552378	22552770	.	+	0	Parent=comp118593_c1_seq1.mrna1;Target=comp118593_c1_seq1 453 845 .
Chr1	gffcl	locus	22575509	22575759	.	-	.	ID=RLOC_00006465;geneIDs=comp135615_c0_seq1.path1;transcripts=comp135615_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22575509	22575759	.	-	.	ID=comp135615_c0_seq1.mrna1;geneID=comp135615_c0_seq1.path1;Name=comp135615_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=250;mismatches=1;indels=0;unknowns=0;Target=comp135615_c0_seq1 251 1 .;CDS_Target=comp135615_c0_seq1 204 1 .;locus=RLOC_00006465
Chr1	stalkie_big_nohaplotig	exon	22575509	22575759	99	-	.	Parent=comp135615_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22575556	22575759	.	-	0	Parent=comp135615_c0_seq1.mrna1
Chr1	gffcl	locus	22576027	22578736	.	-	.	ID=RLOC_00006466;geneIDs=comp147222_c0_seq1.path1;transcripts=comp147222_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22576027	22578736	.	-	.	ID=comp147222_c0_seq1.mrna1;geneID=comp147222_c0_seq1.path1;Name=comp147222_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=493;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006466
Chr1	stalkie_big_nohaplotig	exon	22576027	22576284	100	-	.	Parent=comp147222_c0_seq1.mrna1;Target=comp147222_c0_seq1 1 258 -
Chr1	stalkie_big_nohaplotig	exon	22578502	22578736	100	-	.	Parent=comp147222_c0_seq1.mrna1;Target=comp147222_c0_seq1 259 493 -
Chr1	stalkie_big_nohaplotig	CDS	22576027	22576284	.	-	0	Parent=comp147222_c0_seq1.mrna1;Target=comp147222_c0_seq1 1 258 .
Chr1	stalkie_big_nohaplotig	CDS	22578502	22578504	.	-	0	Parent=comp147222_c0_seq1.mrna1;Target=comp147222_c0_seq1 259 261 .
Chr1	gffcl	locus	22608595	22609273	.	-	.	ID=RLOC_00006467;geneIDs=comp73786_c0_seq1.path1;transcripts=comp73786_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22608595	22609273	.	-	.	ID=comp73786_c0_seq1.mrna1;geneID=comp73786_c0_seq1.path1;Name=comp73786_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=677;mismatches=2;indels=0;unknowns=0;Target=comp73786_c0_seq1 679 1 .;CDS_Target=comp73786_c0_seq1 649 2 .;locus=RLOC_00006467
Chr1	stalkie_big_nohaplotig	exon	22608595	22609273	99	-	.	Parent=comp73786_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22608625	22609272	.	-	0	Parent=comp73786_c0_seq1.mrna1
Chr1	gffcl	locus	22613563	22614653	.	+	.	ID=RLOC_00006468;geneIDs=comp157697_c0_seq1.path1;transcripts=comp157697_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22613563	22614653	.	+	.	ID=comp157697_c0_seq1.mrna1;geneID=comp157697_c0_seq1.path1;Name=comp157697_c0_seq1;Dir=antisensecoverage=99.2;identity=98.8;matches=963;mismatches=10;indels=2;unknowns=0;locus=RLOC_00006468
Chr1	stalkie_big_nohaplotig	exon	22613563	22613985	99	+	.	Parent=comp157697_c0_seq1.mrna1;Target=comp157697_c0_seq1 560 982 -
Chr1	stalkie_big_nohaplotig	exon	22614040	22614106	100	+	.	Parent=comp157697_c0_seq1.mrna1;Target=comp157697_c0_seq1 493 559 -
Chr1	stalkie_big_nohaplotig	exon	22614171	22614653	97	+	.	Parent=comp157697_c0_seq1.mrna1;Target=comp157697_c0_seq1 8 492 -
Chr1	stalkie_big_nohaplotig	CDS	22613679	22613985	.	+	0	Parent=comp157697_c0_seq1.mrna1;Target=comp157697_c0_seq1 560 866 .
Chr1	stalkie_big_nohaplotig	CDS	22614040	22614083	.	+	2	Parent=comp157697_c0_seq1.mrna1;Target=comp157697_c0_seq1 516 559 .
Chr1	gffcl	locus	22651211	22651804	.	+	.	ID=RLOC_00006469;geneIDs=comp1583072_c0_seq1.path1;transcripts=comp1583072_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22651211	22651804	.	+	.	ID=comp1583072_c0_seq1.mrna1;geneID=comp1583072_c0_seq1.path1;Name=comp1583072_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=415;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006469
Chr1	stalkie_big_nohaplotig	exon	22651211	22651227	100	+	.	Parent=comp1583072_c0_seq1.mrna1;Target=comp1583072_c0_seq1 400 416 -
Chr1	stalkie_big_nohaplotig	exon	22651286	22651481	99	+	.	Parent=comp1583072_c0_seq1.mrna1;Target=comp1583072_c0_seq1 204 399 -
Chr1	stalkie_big_nohaplotig	exon	22651602	22651804	100	+	.	Parent=comp1583072_c0_seq1.mrna1;Target=comp1583072_c0_seq1 1 203 -
Chr1	stalkie_big_nohaplotig	CDS	22651213	22651227	.	+	0	Parent=comp1583072_c0_seq1.mrna1;Target=comp1583072_c0_seq1 400 414 .
Chr1	stalkie_big_nohaplotig	CDS	22651286	22651481	.	+	0	Parent=comp1583072_c0_seq1.mrna1;Target=comp1583072_c0_seq1 204 399 .
Chr1	stalkie_big_nohaplotig	CDS	22651602	22651804	.	+	2	Parent=comp1583072_c0_seq1.mrna1;Target=comp1583072_c0_seq1 1 203 .
Chr1	gffcl	locus	22651985	22652278	.	+	.	ID=RLOC_00006470;geneIDs=comp1482702_c0_seq1.path1;transcripts=comp1482702_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22651985	22652278	.	+	.	ID=comp1482702_c0_seq1.mrna1;geneID=comp1482702_c0_seq1.path1;Name=comp1482702_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=294;mismatches=0;indels=0;unknowns=0;Target=comp1482702_c0_seq1 294 1 .;CDS_Target=comp1482702_c0_seq1 240 1 .;locus=RLOC_00006470
Chr1	stalkie_big_nohaplotig	exon	22651985	22652278	100	+	.	Parent=comp1482702_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22651985	22652224	.	+	0	Parent=comp1482702_c0_seq1.mrna1
Chr1	gffcl	locus	22659718	22661174	.	+	.	ID=RLOC_00006471;geneIDs=ORF571.path1;transcripts=ORF571.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22659718	22661174	.	+	.	ID=ORF571.mrna1;geneID=ORF571.path1;Name=ORF571;Dir=indeterminatecoverage=88.6;identity=99.0;matches=1442;mismatches=15;indels=0;unknowns=0;Target=ORF571 1457 1 .;locus=RLOC_00006471
Chr1	stalkie_big_nohaplotig	exon	22659718	22661174	98	+	.	Parent=ORF571.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22659718	22661174	.	+	0	Parent=ORF571.mrna1
Chr1	gffcl	locus	22667111	22679749	.	-	.	ID=RLOC_00006472;geneIDs=comp134859_c0_seq1.path1;transcripts=comp134859_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22667111	22679749	.	-	.	ID=comp134859_c0_seq1.mrna1;geneID=comp134859_c0_seq1.path1;Name=comp134859_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=553;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006472
Chr1	stalkie_big_nohaplotig	exon	22667111	22667396	99	-	.	Parent=comp134859_c0_seq1.mrna1;Target=comp134859_c0_seq1 1 286 -
Chr1	stalkie_big_nohaplotig	exon	22679375	22679470	100	-	.	Parent=comp134859_c0_seq1.mrna1;Target=comp134859_c0_seq1 287 382 -
Chr1	stalkie_big_nohaplotig	exon	22679578	22679749	100	-	.	Parent=comp134859_c0_seq1.mrna1;Target=comp134859_c0_seq1 383 554 -
Chr1	stalkie_big_nohaplotig	CDS	22667112	22667396	.	-	0	Parent=comp134859_c0_seq1.mrna1;Target=comp134859_c0_seq1 2 286 .
Chr1	stalkie_big_nohaplotig	CDS	22679375	22679377	.	-	0	Parent=comp134859_c0_seq1.mrna1;Target=comp134859_c0_seq1 287 289 .
Chr1	gffcl	locus	22758864	22760280	.	+	.	ID=RLOC_00006473;geneIDs=FBgn0036008.2.path1;transcripts=FBgn0036008.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22758864	22760280	.	+	.	ID=FBgn0036008.2.mrna1;geneID=FBgn0036008.2.path1;Name=FBgn0036008.2;Dir=sensecoverage=100.0;identity=94.9;matches=1221;mismatches=48;indels=18;unknowns=0;locus=RLOC_00006473
Chr1	stalkie_big_nohaplotig	exon	22758864	22759380	92	+	.	Parent=FBgn0036008.2.mrna1;Target=FBgn0036008.2 1 517 +
Chr1	stalkie_big_nohaplotig	exon	22759456	22760090	95	+	.	Parent=FBgn0036008.2.mrna1;Target=FBgn0036008.2 518 1134 +
Chr1	stalkie_big_nohaplotig	exon	22760146	22760280	100	+	.	Parent=FBgn0036008.2.mrna1;Target=FBgn0036008.2 1135 1269 +
Chr1	stalkie_big_nohaplotig	CDS	22758864	22759380	.	+	0	Parent=FBgn0036008.2.mrna1;Target=FBgn0036008.2 1 517 +
Chr1	stalkie_big_nohaplotig	CDS	22759456	22760090	.	+	2	Parent=FBgn0036008.2.mrna1;Target=FBgn0036008.2 518 1134 +
Chr1	stalkie_big_nohaplotig	CDS	22760146	22760280	.	+	0	Parent=FBgn0036008.2.mrna1;Target=FBgn0036008.2 1135 1269 +
Chr1	gffcl	locus	22770152	22770402	.	+	.	ID=RLOC_00006474;geneIDs=comp134763_c0_seq1.path1;transcripts=comp134763_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22770152	22770402	.	+	.	ID=comp134763_c0_seq1.mrna1;geneID=comp134763_c0_seq1.path1;Name=comp134763_c0_seq1;Dir=indeterminatecoverage=96.9;identity=99.6;matches=251;mismatches=0;indels=1;unknowns=0;Target=comp134763_c0_seq1 257 6 .;CDS_Target=comp134763_c0_seq1 121 8 .;locus=RLOC_00006474
Chr1	stalkie_big_nohaplotig	exon	22770152	22770402	99	+	.	Parent=comp134763_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22770154	22770266	.	+	0	Parent=comp134763_c0_seq1.mrna1
Chr1	gffcl	locus	22780900	22781267	.	+	.	ID=RLOC_00006475;geneIDs=comp887429_c0_seq1.path1;transcripts=comp887429_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22780900	22781267	.	+	.	ID=comp887429_c0_seq1.mrna1;geneID=comp887429_c0_seq1.path1;Name=comp887429_c0_seq1;Dir=indeterminatecoverage=90.7;identity=82.6;matches=319;mismatches=25;indels=42;unknowns=0;Target=comp887429_c0_seq1 362 1 .;CDS_Target=comp887429_c0_seq1 223 191 .;locus=RLOC_00006475
Chr1	stalkie_big_nohaplotig	exon	22780900	22781267	82	+	.	Parent=comp887429_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22781076	22781112	.	+	0	Parent=comp887429_c0_seq1.mrna1
Chr1	gffcl	locus	22781435	22781875	.	+	.	ID=RLOC_00006476;geneIDs=comp117988_c0_seq1.path1;transcripts=comp117988_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22781435	22781875	.	+	.	ID=comp117988_c0_seq1.mrna1;geneID=comp117988_c0_seq1.path1;Name=comp117988_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.1;matches=417;mismatches=21;indels=5;unknowns=0;Target=comp117988_c0_seq1 440 1 .;CDS_Target=comp117988_c0_seq1 45 1 .;locus=RLOC_00006476
Chr1	stalkie_big_nohaplotig	exon	22781435	22781875	94	+	.	Parent=comp117988_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22781435	22781480	.	+	0	Parent=comp117988_c0_seq1.mrna1
Chr1	gffcl	locus	22791263	22792393	.	-	.	ID=RLOC_00006477;geneIDs=comp128650_c0_seq1.path1;transcripts=comp128650_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22791263	22792393	.	-	.	ID=comp128650_c0_seq1.mrna1;geneID=comp128650_c0_seq1.path1;Name=comp128650_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=1129;mismatches=2;indels=0;unknowns=0;Target=comp128650_c0_seq1 1132 2 .;CDS_Target=comp128650_c0_seq1 500 84 .;locus=RLOC_00006477
Chr1	stalkie_big_nohaplotig	exon	22791263	22792393	99	-	.	Parent=comp128650_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22791895	22792311	.	-	0	Parent=comp128650_c0_seq1.mrna1
Chr1	gffcl	locus	22840747	22840997	.	-	.	ID=RLOC_00006479;geneIDs=comp134763_c0_seq1.path2;transcripts=comp134763_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	22840747	22840997	.	-	.	ID=comp134763_c0_seq1.mrna2;geneID=comp134763_c0_seq1.path2;Name=comp134763_c0_seq1;Dir=indeterminatecoverage=96.9;identity=99.6;matches=251;mismatches=0;indels=1;unknowns=0;Target=comp134763_c0_seq1 257 6 .;CDS_Target=comp134763_c0_seq1 121 8 .;locus=RLOC_00006479
Chr1	stalkie_big_nohaplotig	exon	22840747	22840997	99	-	.	Parent=comp134763_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	22840883	22840995	.	-	0	Parent=comp134763_c0_seq1.mrna2
Chr1	gffcl	locus	22846577	22847246	.	+	.	ID=RLOC_00006480;geneIDs=comp146988_c0_seq1.path1;transcripts=comp146988_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22846577	22847246	.	+	.	ID=comp146988_c0_seq1.mrna1;geneID=comp146988_c0_seq1.path1;Name=comp146988_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=571;mismatches=0;indels=0;unknowns=0;Target=comp146988_c0_seq1 2 262 +;locus=RLOC_00006480
Chr1	stalkie_big_nohaplotig	exon	22846577	22847123	100	+	.	Parent=comp146988_c0_seq1.mrna1;Target=comp146988_c0_seq1 1 547 +
Chr1	stalkie_big_nohaplotig	exon	22847223	22847246	100	+	.	Parent=comp146988_c0_seq1.mrna1;Target=comp146988_c0_seq1 548 571 +
Chr1	stalkie_big_nohaplotig	CDS	22846578	22846838	.	+	0	Parent=comp146988_c0_seq1.mrna1
Chr1	gffcl	locus	22847742	22851550	.	+	.	ID=RLOC_00006481;geneIDs=FBgn0035986.1.path1;transcripts=FBgn0035986.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22847742	22851550	.	+	.	ID=FBgn0035986.1.mrna1;geneID=FBgn0035986.1.path1;Name=FBgn0035986.1;Dir=sensecoverage=100.0;identity=99.8;matches=1483;mismatches=1;indels=2;unknowns=0;locus=RLOC_00006481
Chr1	stalkie_big_nohaplotig	exon	22847742	22848255	99	+	.	Parent=FBgn0035986.1.mrna1;Target=FBgn0035986.1 1 513 +
Chr1	stalkie_big_nohaplotig	exon	22848330	22848499	100	+	.	Parent=FBgn0035986.1.mrna1;Target=FBgn0035986.1 514 683 +
Chr1	stalkie_big_nohaplotig	exon	22850750	22851550	99	+	.	Parent=FBgn0035986.1.mrna1;Target=FBgn0035986.1 684 1485 +
Chr1	stalkie_big_nohaplotig	CDS	22847797	22848255	.	+	0	Parent=FBgn0035986.1.mrna1;Target=FBgn0035986.1 55 513 +
Chr1	stalkie_big_nohaplotig	CDS	22848330	22848499	.	+	0	Parent=FBgn0035986.1.mrna1;Target=FBgn0035986.1 514 683 +
Chr1	stalkie_big_nohaplotig	CDS	22850750	22851550	.	+	1	Parent=FBgn0035986.1.mrna1;Target=FBgn0035986.1 684 1485 +
Chr1	gffcl	locus	22859236	22859628	.	-	.	ID=RLOC_00006483;geneIDs=Dv_FBgn0206941.5.path2;transcripts=Dv_FBgn0206941.5.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	22859236	22859628	.	-	.	ID=Dv_FBgn0206941.5.mrna2;geneID=Dv_FBgn0206941.5.path2;Name=Dv_FBgn0206941.5;Dir=indeterminatecoverage=100.0;identity=93.1;matches=366;mismatches=27;indels=0;unknowns=0;Target=Dv_FBgn0206941.5 393 1 .;locus=RLOC_00006483
Chr1	stalkie_big_nohaplotig	exon	22859236	22859628	93	-	.	Parent=Dv_FBgn0206941.5.mrna2
Chr1	stalkie_big_nohaplotig	CDS	22859236	22859628	.	-	0	Parent=Dv_FBgn0206941.5.mrna2
Chr1	gffcl	locus	22860228	22864459	.	+	.	ID=RLOC_00006484;geneIDs=comp160911_c0_seq1.path1,comp161084_c3_seq1.path1;transcripts=comp161084_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22861380	22864459	.	+	.	ID=comp161084_c3_seq1.mrna1;geneID=comp161084_c3_seq1.path1;Name=comp161084_c3_seq1;Dir=antisensecoverage=3.9;identity=98.8;matches=316;mismatches=2;indels=2;unknowns=0;locus=RLOC_00006484
Chr1	stalkie_big_nohaplotig	exon	22861380	22861479	96	+	.	Parent=comp161084_c3_seq1.mrna1;Target=comp161084_c3_seq1 221 318 -
Chr1	stalkie_big_nohaplotig	exon	22864240	22864459	100	+	.	Parent=comp161084_c3_seq1.mrna1;Target=comp161084_c3_seq1 1 220 -
Chr1	gffcl	locus	22868863	22921186	.	.	.	ID=RLOC_00006485;geneIDs=ORF172.path1,comp158849_c6_seq1.path1,comp162368_c1_seq1.path1;transcripts=comp158849_c6_seq1.mrna1,ORF172.mrna1,comp162368_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22868863	22871450	.	+	.	ID=comp158849_c6_seq1.mrna1;geneID=comp158849_c6_seq1.path1;Name=comp158849_c6_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=2588;mismatches=0;indels=7;unknowns=0;Target=comp158849_c6_seq1 2595 1 .;CDS_Target=comp158849_c6_seq1 888 751 .;locus=RLOC_00006485
Chr1	stalkie_big_nohaplotig	exon	22868863	22871450	99	+	.	Parent=comp158849_c6_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22869613	22869750	.	+	0	Parent=comp158849_c6_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22869402	22921186	.	+	.	ID=ORF172.mrna1;geneID=ORF172.path1;Name=ORF172;Dir=antisensecoverage=66.6;identity=90.3;matches=1498;mismatches=128;indels=32;unknowns=0;Target=ORF172 327 497 .;locus=RLOC_00006485
Chr1	stalkie_big_nohaplotig	exon	22869402	22869615	72	+	.	Parent=ORF172.mrna1;Target=ORF172 1568 1781 -
Chr1	stalkie_big_nohaplotig	exon	22871097	22871130	42	+	.	Parent=ORF172.mrna1;Target=ORF172 1486 1542 -
Chr1	stalkie_big_nohaplotig	exon	22871989	22871996	100	+	.	Parent=ORF172.mrna1;Target=ORF172 1435 1442 -
Chr1	stalkie_big_nohaplotig	exon	22882088	22882094	100	+	.	Parent=ORF172.mrna1;Target=ORF172 1422 1428 -
Chr1	stalkie_big_nohaplotig	exon	22890757	22890802	51	+	.	Parent=ORF172.mrna1;Target=ORF172 1369 1421 -
Chr1	stalkie_big_nohaplotig	exon	22893810	22893822	76	+	.	Parent=ORF172.mrna1;Target=ORF172 1356 1368 -
Chr1	stalkie_big_nohaplotig	exon	22897569	22897570	100	+	.	Parent=ORF172.mrna1;Target=ORF172 1354 1355 -
Chr1	stalkie_big_nohaplotig	exon	22904046	22904050	100	+	.	Parent=ORF172.mrna1;Target=ORF172 1349 1353 -
Chr1	stalkie_big_nohaplotig	exon	22905478	22905484	100	+	.	Parent=ORF172.mrna1;Target=ORF172 1342 1348 -
Chr1	stalkie_big_nohaplotig	exon	22911136	22911175	82	+	.	Parent=ORF172.mrna1;Target=ORF172 1250 1289 -
Chr1	stalkie_big_nohaplotig	exon	22919938	22921186	97	+	.	Parent=ORF172.mrna1;Target=ORF172 1 1249 -
Chr1	stalkie_big_nohaplotig	CDS	22920690	22920860	.	+	0	Parent=ORF172.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22892651	22893907	.	-	.	ID=comp162368_c1_seq1.mrna1;geneID=comp162368_c1_seq1.path1;Name=comp162368_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1253;mismatches=4;indels=0;unknowns=0;Target=comp162368_c1_seq1 1257 1 .;CDS_Target=comp162368_c1_seq1 791 648 .;locus=RLOC_00006485
Chr1	stalkie_big_nohaplotig	exon	22892651	22893907	99	-	.	Parent=comp162368_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22893117	22893260	.	-	0	Parent=comp162368_c1_seq1.mrna1
Chr1	gffcl	locus	22879943	22883029	.	-	.	ID=RLOC_00006486;geneIDs=comp154704_c2_seq1.path1;transcripts=comp154704_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22879943	22883029	.	-	.	ID=comp154704_c2_seq1.mrna1;geneID=comp154704_c2_seq1.path1;Name=comp154704_c2_seq1;Dir=antisensecoverage=99.9;identity=99.3;matches=2999;mismatches=20;indels=2;unknowns=0;locus=RLOC_00006486
Chr1	stalkie_big_nohaplotig	exon	22879943	22881950	98	-	.	Parent=comp154704_c2_seq1.mrna1;Target=comp154704_c2_seq1 2 2009 -
Chr1	stalkie_big_nohaplotig	exon	22882018	22883029	100	-	.	Parent=comp154704_c2_seq1.mrna1;Target=comp154704_c2_seq1 2010 3021 -
Chr1	stalkie_big_nohaplotig	CDS	22880926	22881950	.	-	2	Parent=comp154704_c2_seq1.mrna1;Target=comp154704_c2_seq1 985 2009 .
Chr1	stalkie_big_nohaplotig	CDS	22882018	22882243	.	-	0	Parent=comp154704_c2_seq1.mrna1;Target=comp154704_c2_seq1 2010 2235 .
Chr1	gffcl	locus	22911677	22912740	.	+	.	ID=RLOC_00006487;geneIDs=comp151810_c1_seq1.path1;transcripts=comp151810_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22911677	22912740	.	+	.	ID=comp151810_c1_seq1.mrna1;geneID=comp151810_c1_seq1.path1;Name=comp151810_c1_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1063;mismatches=1;indels=0;unknowns=0;Target=comp151810_c1_seq1 1064 1 .;CDS_Target=comp151810_c1_seq1 448 296 .;locus=RLOC_00006487
Chr1	stalkie_big_nohaplotig	exon	22911677	22912740	99	+	.	Parent=comp151810_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22911972	22912124	.	+	0	Parent=comp151810_c1_seq1.mrna1
Chr1	gffcl	locus	22931004	22931568	.	-	.	ID=RLOC_00006488;geneIDs=comp163654_c0_seq1.path1;transcripts=comp163654_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22931004	22931568	.	-	.	ID=comp163654_c0_seq1.mrna1;geneID=comp163654_c0_seq1.path1;Name=comp163654_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.8;matches=530;mismatches=5;indels=30;unknowns=0;Target=comp163654_c0_seq1 535 1 .;CDS_Target=comp163654_c0_seq1 533 3 .;locus=RLOC_00006488
Chr1	stalkie_big_nohaplotig	exon	22931004	22931568	93	-	.	Parent=comp163654_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22931006	22931566	.	-	0	Parent=comp163654_c0_seq1.mrna1
Chr1	gffcl	locus	22938437	22940142	.	+	.	ID=RLOC_00006489;geneIDs=comp163916_c1_seq1.path1;transcripts=comp163916_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22938437	22940142	.	+	.	ID=comp163916_c1_seq1.mrna1;geneID=comp163916_c1_seq1.path1;Name=comp163916_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=1682;mismatches=23;indels=22;unknowns=0;Target=comp163916_c1_seq1 1726 1 .;CDS_Target=comp163916_c1_seq1 685 521 .;locus=RLOC_00006489
Chr1	stalkie_big_nohaplotig	exon	22938437	22940142	97	+	.	Parent=comp163916_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22938957	22939121	.	+	0	Parent=comp163916_c1_seq1.mrna1
Chr1	gffcl	locus	22948922	22950972	.	-	.	ID=RLOC_00006490;geneIDs=FBgn0035985.1.path1;transcripts=FBgn0035985.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22948922	22950972	.	-	.	ID=FBgn0035985.1.mrna1;geneID=FBgn0035985.1.path1;Name=FBgn0035985.1;Dir=sensecoverage=100.0;identity=100.0;matches=798;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006490
Chr1	stalkie_big_nohaplotig	exon	22948922	22949674	100	-	.	Parent=FBgn0035985.1.mrna1;Target=FBgn0035985.1 46 798 +
Chr1	stalkie_big_nohaplotig	exon	22950928	22950972	100	-	.	Parent=FBgn0035985.1.mrna1;Target=FBgn0035985.1 1 45 +
Chr1	stalkie_big_nohaplotig	CDS	22948922	22949674	.	-	0	Parent=FBgn0035985.1.mrna1;Target=FBgn0035985.1 46 798 +
Chr1	stalkie_big_nohaplotig	CDS	22950928	22950972	.	-	0	Parent=FBgn0035985.1.mrna1;Target=FBgn0035985.1 1 45 +
Chr1	gffcl	locus	22964844	22965698	.	-	.	ID=RLOC_00006491;geneIDs=ORF2463.path1;transcripts=ORF2463.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22964844	22965698	.	-	.	ID=ORF2463.mrna1;geneID=ORF2463.path1;Name=ORF2463;Dir=indeterminatecoverage=100.0;identity=99.2;matches=848;mismatches=7;indels=0;unknowns=0;Target=ORF2463 855 1 .;locus=RLOC_00006491
Chr1	stalkie_big_nohaplotig	exon	22964844	22965698	99	-	.	Parent=ORF2463.mrna1
Chr1	stalkie_big_nohaplotig	CDS	22964844	22965698	.	-	0	Parent=ORF2463.mrna1
Chr1	gffcl	locus	22967422	22978209	.	-	.	ID=RLOC_00006492;geneIDs=FBgn0036680.1.path1;transcripts=FBgn0036680.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22967422	22978209	.	-	.	ID=FBgn0036680.1.mrna1;geneID=FBgn0036680.1.path1;Name=FBgn0036680.1;Dir=sensecoverage=100.0;identity=99.4;matches=1608;mismatches=9;indels=0;unknowns=0;locus=RLOC_00006492
Chr1	stalkie_big_nohaplotig	exon	22967422	22968611	99	-	.	Parent=FBgn0036680.1.mrna1;Target=FBgn0036680.1 428 1617 +
Chr1	stalkie_big_nohaplotig	exon	22968673	22968854	98	-	.	Parent=FBgn0036680.1.mrna1;Target=FBgn0036680.1 246 427 +
Chr1	stalkie_big_nohaplotig	exon	22974397	22974534	99	-	.	Parent=FBgn0036680.1.mrna1;Target=FBgn0036680.1 108 245 +
Chr1	stalkie_big_nohaplotig	exon	22978103	22978209	100	-	.	Parent=FBgn0036680.1.mrna1;Target=FBgn0036680.1 1 107 +
Chr1	stalkie_big_nohaplotig	CDS	22967422	22968611	.	-	2	Parent=FBgn0036680.1.mrna1;Target=FBgn0036680.1 428 1617 +
Chr1	stalkie_big_nohaplotig	CDS	22968673	22968854	.	-	1	Parent=FBgn0036680.1.mrna1;Target=FBgn0036680.1 246 427 +
Chr1	stalkie_big_nohaplotig	CDS	22974397	22974534	.	-	1	Parent=FBgn0036680.1.mrna1;Target=FBgn0036680.1 108 245 +
Chr1	stalkie_big_nohaplotig	CDS	22978103	22978209	.	-	0	Parent=FBgn0036680.1.mrna1;Target=FBgn0036680.1 1 107 +
Chr1	gffcl	locus	22988905	22990737	.	+	.	ID=RLOC_00006493;geneIDs=FBgn0036681.1.path1;transcripts=FBgn0036681.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	22988905	22990737	.	+	.	ID=FBgn0036681.1.mrna1;geneID=FBgn0036681.1.path1;Name=FBgn0036681.1;Dir=sensecoverage=96.7;identity=98.7;matches=690;mismatches=9;indels=0;unknowns=0;locus=RLOC_00006493
Chr1	stalkie_big_nohaplotig	exon	22988905	22988998	98	+	.	Parent=FBgn0036681.1.mrna1;Target=FBgn0036681.1 25 118 +
Chr1	stalkie_big_nohaplotig	exon	22989606	22989928	98	+	.	Parent=FBgn0036681.1.mrna1;Target=FBgn0036681.1 119 441 +
Chr1	stalkie_big_nohaplotig	exon	22990456	22990737	99	+	.	Parent=FBgn0036681.1.mrna1;Target=FBgn0036681.1 442 723 +
Chr1	stalkie_big_nohaplotig	CDS	22988905	22988998	.	+	0	Parent=FBgn0036681.1.mrna1;Target=FBgn0036681.1 25 118 +
Chr1	stalkie_big_nohaplotig	CDS	22989606	22989928	.	+	2	Parent=FBgn0036681.1.mrna1;Target=FBgn0036681.1 119 441 +
Chr1	stalkie_big_nohaplotig	CDS	22990456	22990737	.	+	0	Parent=FBgn0036681.1.mrna1;Target=FBgn0036681.1 442 723 +
Chr1	gffcl	locus	23016534	23046306	.	.	.	ID=RLOC_00006494;geneIDs=FBgn0010352.1.path1,comp50705_c0_seq1.path1,comp150275_c0_seq1.path1,comp152182_c0_seq1.path1;transcripts=FBgn0010352.1.mrna1,comp152182_c0_seq1.mrna1,comp50705_c0_seq1.mrna1,comp150275_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23016534	23031226	.	+	.	ID=FBgn0010352.1.mrna1;geneID=FBgn0010352.1.path1;Name=FBgn0010352.1;Dir=sensecoverage=100.0;identity=99.7;matches=3314;mismatches=10;indels=0;unknowns=0;locus=RLOC_00006494
Chr1	stalkie_big_nohaplotig	exon	23016534	23016641	100	+	.	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 1 108 +
Chr1	stalkie_big_nohaplotig	exon	23016703	23016846	100	+	.	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 109 252 +
Chr1	stalkie_big_nohaplotig	exon	23016918	23017088	100	+	.	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 253 423 +
Chr1	stalkie_big_nohaplotig	exon	23019204	23019306	100	+	.	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 424 526 +
Chr1	stalkie_big_nohaplotig	exon	23021149	23021227	100	+	.	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 527 605 +
Chr1	stalkie_big_nohaplotig	exon	23021296	23021472	100	+	.	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 606 782 +
Chr1	stalkie_big_nohaplotig	exon	23022573	23022807	100	+	.	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 783 1017 +
Chr1	stalkie_big_nohaplotig	exon	23022879	23023592	99	+	.	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 1018 1731 +
Chr1	stalkie_big_nohaplotig	exon	23023669	23023823	100	+	.	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 1732 1886 +
Chr1	stalkie_big_nohaplotig	exon	23023881	23024775	99	+	.	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 1887 2781 +
Chr1	stalkie_big_nohaplotig	exon	23024849	23025003	100	+	.	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 2782 2936 +
Chr1	stalkie_big_nohaplotig	exon	23027401	23027691	100	+	.	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 2937 3227 +
Chr1	stalkie_big_nohaplotig	exon	23031130	23031226	100	+	.	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 3228 3324 +
Chr1	stalkie_big_nohaplotig	CDS	23016534	23016641	.	+	0	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 1 108 +
Chr1	stalkie_big_nohaplotig	CDS	23016703	23016846	.	+	0	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 109 252 +
Chr1	stalkie_big_nohaplotig	CDS	23016918	23017088	.	+	0	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 253 423 +
Chr1	stalkie_big_nohaplotig	CDS	23019204	23019306	.	+	0	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 424 526 +
Chr1	stalkie_big_nohaplotig	CDS	23021149	23021227	.	+	2	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 527 605 +
Chr1	stalkie_big_nohaplotig	CDS	23021296	23021472	.	+	1	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 606 782 +
Chr1	stalkie_big_nohaplotig	CDS	23022573	23022807	.	+	1	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 783 1017 +
Chr1	stalkie_big_nohaplotig	CDS	23022879	23023592	.	+	0	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 1018 1731 +
Chr1	stalkie_big_nohaplotig	CDS	23023669	23023823	.	+	0	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 1732 1886 +
Chr1	stalkie_big_nohaplotig	CDS	23023881	23024775	.	+	1	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 1887 2781 +
Chr1	stalkie_big_nohaplotig	CDS	23024849	23025003	.	+	0	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 2782 2936 +
Chr1	stalkie_big_nohaplotig	CDS	23027401	23027691	.	+	1	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 2937 3227 +
Chr1	stalkie_big_nohaplotig	CDS	23031130	23031226	.	+	1	Parent=FBgn0010352.1.mrna1;Target=FBgn0010352.1 3228 3324 +
Chr1	stalkie_big_nohaplotig	mRNA	23019284	23046306	.	+	.	ID=comp152182_c0_seq1.mrna1;geneID=comp152182_c0_seq1.path1;Name=comp152182_c0_seq1;Dir=indeterminatecoverage=77.3;identity=99.8;matches=643;mismatches=1;indels=0;unknowns=0;Target=comp152182_c0_seq1 146 3 .;locus=RLOC_00006494
Chr1	stalkie_big_nohaplotig	exon	23019284	23019623	100	+	.	Parent=comp152182_c0_seq1.mrna1;Target=comp152182_c0_seq1 340 1 .
Chr1	stalkie_big_nohaplotig	exon	23040579	23040671	98	+	.	Parent=comp152182_c0_seq1.mrna1;Target=comp152182_c0_seq1 433 341 .
Chr1	stalkie_big_nohaplotig	exon	23046096	23046306	100	+	.	Parent=comp152182_c0_seq1.mrna1;Target=comp152182_c0_seq1 644 434 .
Chr1	stalkie_big_nohaplotig	CDS	23019286	23019429	.	+	0	Parent=comp152182_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23027096	23027421	.	+	.	ID=comp50705_c0_seq1.mrna1;geneID=comp50705_c0_seq1.path1;Name=comp50705_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=326;mismatches=0;indels=1;unknowns=0;Target=comp50705_c0_seq1 327 1 .;CDS_Target=comp50705_c0_seq1 108 1 .;locus=RLOC_00006494
Chr1	stalkie_big_nohaplotig	exon	23027096	23027421	99	+	.	Parent=comp50705_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23027096	23027202	.	+	0	Parent=comp50705_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23030869	23031174	.	-	.	ID=comp150275_c0_seq1.mrna1;geneID=comp150275_c0_seq1.path1;Name=comp150275_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=301;mismatches=5;indels=0;unknowns=0;Target=comp150275_c0_seq1 306 1 .;CDS_Target=comp150275_c0_seq1 93 1 .;locus=RLOC_00006494
Chr1	stalkie_big_nohaplotig	exon	23030869	23031174	98	-	.	Parent=comp150275_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23031082	23031174	.	-	0	Parent=comp150275_c0_seq1.mrna1
Chr1	gffcl	locus	23031294	23033133	.	.	.	ID=RLOC_00006495;geneIDs=comp144024_c0_seq1.path1,comp159639_c1_seq1.path1;transcripts=comp159639_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23031897	23033133	.	-	.	ID=comp159639_c1_seq1.mrna1;geneID=comp159639_c1_seq1.path1;Name=comp159639_c1_seq1;Dir=indeterminatecoverage=90.8;identity=95.4;matches=1186;mismatches=21;indels=36;unknowns=0;Target=comp159639_c1_seq1 746 576 .;locus=RLOC_00006495
Chr1	stalkie_big_nohaplotig	exon	23031897	23032171	97	-	.	Parent=comp159639_c1_seq1.mrna1;Target=comp159639_c1_seq1 1349 1067 .
Chr1	stalkie_big_nohaplotig	exon	23032178	23033133	94	-	.	Parent=comp159639_c1_seq1.mrna1;Target=comp159639_c1_seq1 1050 115 .
Chr1	stalkie_big_nohaplotig	CDS	23032479	23032648	.	-	0	Parent=comp159639_c1_seq1.mrna1
Chr1	gffcl	locus	23054237	23056660	.	-	.	ID=RLOC_00006496;geneIDs=FBgn0035241.1.path1;transcripts=FBgn0035241.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23054237	23056660	.	-	.	ID=FBgn0035241.1.mrna1;geneID=FBgn0035241.1.path1;Name=FBgn0035241.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=2416;mismatches=8;indels=0;unknowns=0;Target=FBgn0035241.1 2424 1 .;locus=RLOC_00006496
Chr1	stalkie_big_nohaplotig	exon	23054237	23056660	99	-	.	Parent=FBgn0035241.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23054237	23056660	.	-	0	Parent=FBgn0035241.1.mrna1
Chr1	gffcl	locus	23056779	23059780	.	-	.	ID=RLOC_00006497;geneIDs=ORF111.path1;transcripts=ORF111.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23056779	23059780	.	-	.	ID=ORF111.mrna1;geneID=ORF111.path1;Name=ORF111;Dir=indeterminatecoverage=98.2;identity=97.5;matches=2928;mismatches=32;indels=42;unknowns=0;Target=ORF111 2960 1 .;CDS_Target=ORF111 2958 1 .;locus=RLOC_00006497
Chr1	stalkie_big_nohaplotig	exon	23056779	23059780	97	-	.	Parent=ORF111.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23056781	23059780	.	-	0	Parent=ORF111.mrna1
Chr1	gffcl	locus	23077184	23103007	.	+	.	ID=RLOC_00006498;geneIDs=FBgn0036678.1.path1;transcripts=FBgn0036678.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23077184	23103007	.	+	.	ID=FBgn0036678.1.mrna1;geneID=FBgn0036678.1.path1;Name=FBgn0036678.1;Dir=sensecoverage=100.0;identity=99.8;matches=1311;mismatches=3;indels=0;unknowns=0;locus=RLOC_00006498
Chr1	stalkie_big_nohaplotig	exon	23077184	23077219	100	+	.	Parent=FBgn0036678.1.mrna1;Target=FBgn0036678.1 1 36 +
Chr1	stalkie_big_nohaplotig	exon	23095890	23095963	98	+	.	Parent=FBgn0036678.1.mrna1;Target=FBgn0036678.1 37 110 +
Chr1	stalkie_big_nohaplotig	exon	23101599	23102317	99	+	.	Parent=FBgn0036678.1.mrna1;Target=FBgn0036678.1 111 829 +
Chr1	stalkie_big_nohaplotig	exon	23102523	23103007	100	+	.	Parent=FBgn0036678.1.mrna1;Target=FBgn0036678.1 830 1314 +
Chr1	stalkie_big_nohaplotig	CDS	23077184	23077219	.	+	0	Parent=FBgn0036678.1.mrna1;Target=FBgn0036678.1 1 36 +
Chr1	stalkie_big_nohaplotig	CDS	23095890	23095963	.	+	0	Parent=FBgn0036678.1.mrna1;Target=FBgn0036678.1 37 110 +
Chr1	stalkie_big_nohaplotig	CDS	23101599	23102317	.	+	1	Parent=FBgn0036678.1.mrna1;Target=FBgn0036678.1 111 829 +
Chr1	stalkie_big_nohaplotig	CDS	23102523	23103007	.	+	2	Parent=FBgn0036678.1.mrna1;Target=FBgn0036678.1 830 1314 +
Chr1	gffcl	locus	23107245	23109408	.	+	.	ID=RLOC_00006499;geneIDs=comp119248_c0_seq1.path1;transcripts=comp119248_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23107245	23109408	.	+	.	ID=comp119248_c0_seq1.mrna1;geneID=comp119248_c0_seq1.path1;Name=comp119248_c0_seq1;Dir=sensecoverage=99.8;identity=99.3;matches=547;mismatches=4;indels=0;unknowns=0;Target=comp119248_c0_seq1 275 388 +;locus=RLOC_00006499
Chr1	stalkie_big_nohaplotig	exon	23107245	23107268	95	+	.	Parent=comp119248_c0_seq1.mrna1;Target=comp119248_c0_seq1 1 24 +
Chr1	stalkie_big_nohaplotig	exon	23108882	23109408	99	+	.	Parent=comp119248_c0_seq1.mrna1;Target=comp119248_c0_seq1 25 551 +
Chr1	stalkie_big_nohaplotig	CDS	23109132	23109245	.	+	0	Parent=comp119248_c0_seq1.mrna1
Chr1	gffcl	locus	23178505	23191456	.	+	.	ID=RLOC_00006500;geneIDs=comp144226_c0_seq1.path1;transcripts=comp144226_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23178505	23191456	.	+	.	ID=comp144226_c0_seq1.mrna1;geneID=comp144226_c0_seq1.path1;Name=comp144226_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=792;mismatches=0;indels=8;unknowns=0;Target=comp144226_c0_seq1 229 2 .;locus=RLOC_00006500
Chr1	stalkie_big_nohaplotig	exon	23178505	23178904	99	+	.	Parent=comp144226_c0_seq1.mrna1;Target=comp144226_c0_seq1 404 1 .
Chr1	stalkie_big_nohaplotig	exon	23191065	23191456	98	+	.	Parent=comp144226_c0_seq1.mrna1;Target=comp144226_c0_seq1 800 405 .
Chr1	stalkie_big_nohaplotig	CDS	23178506	23178729	.	+	0	Parent=comp144226_c0_seq1.mrna1
Chr1	gffcl	locus	23182685	23184121	.	-	.	ID=RLOC_00006501;geneIDs=FBgn0013342.1.path1;transcripts=FBgn0013342.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23182685	23184121	.	-	.	ID=FBgn0013342.1.mrna1;geneID=FBgn0013342.1.path1;Name=FBgn0013342.1;Dir=sensecoverage=36.2;identity=100.0;matches=213;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006501
Chr1	stalkie_big_nohaplotig	exon	23182685	23182835	100	-	.	Parent=FBgn0013342.1.mrna1;Target=FBgn0013342.1 63 213 +
Chr1	stalkie_big_nohaplotig	exon	23184060	23184121	100	-	.	Parent=FBgn0013342.1.mrna1;Target=FBgn0013342.1 1 62 +
Chr1	stalkie_big_nohaplotig	CDS	23182685	23182835	.	-	1	Parent=FBgn0013342.1.mrna1;Target=FBgn0013342.1 63 213 +
Chr1	stalkie_big_nohaplotig	CDS	23184060	23184121	.	-	0	Parent=FBgn0013342.1.mrna1;Target=FBgn0013342.1 1 62 +
Chr1	gffcl	locus	23187046	23188103	.	+	.	ID=RLOC_00006502;geneIDs=FBgn0035247.1.path1;transcripts=FBgn0035247.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23187046	23188103	.	+	.	ID=FBgn0035247.1.mrna1;geneID=FBgn0035247.1.path1;Name=FBgn0035247.1;Dir=sensecoverage=100.0;identity=98.3;matches=988;mismatches=17;indels=0;unknowns=0;locus=RLOC_00006502
Chr1	stalkie_big_nohaplotig	exon	23187046	23187224	97	+	.	Parent=FBgn0035247.1.mrna1;Target=FBgn0035247.1 1 179 +
Chr1	stalkie_big_nohaplotig	exon	23187278	23188103	98	+	.	Parent=FBgn0035247.1.mrna1;Target=FBgn0035247.1 180 1005 +
Chr1	stalkie_big_nohaplotig	CDS	23187046	23187224	.	+	0	Parent=FBgn0035247.1.mrna1;Target=FBgn0035247.1 1 179 +
Chr1	stalkie_big_nohaplotig	CDS	23187278	23188103	.	+	1	Parent=FBgn0035247.1.mrna1;Target=FBgn0035247.1 180 1005 +
Chr1	gffcl	locus	23197658	23198888	.	+	.	ID=RLOC_00006504;geneIDs=FBgn0035372.1.path2;transcripts=FBgn0035372.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	23197658	23198888	.	+	.	ID=FBgn0035372.1.mrna2;geneID=FBgn0035372.1.path2;Name=FBgn0035372.1;Dir=sensecoverage=100.0;identity=99.7;matches=993;mismatches=3;indels=0;unknowns=0;locus=RLOC_00006504
Chr1	stalkie_big_nohaplotig	exon	23197658	23197931	99	+	.	Parent=FBgn0035372.1.mrna2;Target=FBgn0035372.1 1 274 +
Chr1	stalkie_big_nohaplotig	exon	23198039	23198142	100	+	.	Parent=FBgn0035372.1.mrna2;Target=FBgn0035372.1 275 378 +
Chr1	stalkie_big_nohaplotig	exon	23198213	23198409	100	+	.	Parent=FBgn0035372.1.mrna2;Target=FBgn0035372.1 379 575 +
Chr1	stalkie_big_nohaplotig	exon	23198468	23198888	99	+	.	Parent=FBgn0035372.1.mrna2;Target=FBgn0035372.1 576 996 +
Chr1	stalkie_big_nohaplotig	CDS	23197658	23197931	.	+	0	Parent=FBgn0035372.1.mrna2;Target=FBgn0035372.1 1 274 +
Chr1	stalkie_big_nohaplotig	CDS	23198039	23198142	.	+	2	Parent=FBgn0035372.1.mrna2;Target=FBgn0035372.1 275 378 +
Chr1	stalkie_big_nohaplotig	CDS	23198213	23198409	.	+	0	Parent=FBgn0035372.1.mrna2;Target=FBgn0035372.1 379 575 +
Chr1	stalkie_big_nohaplotig	CDS	23198468	23198888	.	+	1	Parent=FBgn0035372.1.mrna2;Target=FBgn0035372.1 576 996 +
Chr1	gffcl	locus	23203096	23212135	.	+	.	ID=RLOC_00006505;geneIDs=FBgn0035371.2.path1;transcripts=FBgn0035371.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23203096	23212135	.	+	.	ID=FBgn0035371.2.mrna1;geneID=FBgn0035371.2.path1;Name=FBgn0035371.2;Dir=sensecoverage=100.0;identity=99.4;matches=1515;mismatches=9;indels=0;unknowns=0;locus=RLOC_00006505
Chr1	stalkie_big_nohaplotig	exon	23203096	23203578	99	+	.	Parent=FBgn0035371.2.mrna1;Target=FBgn0035371.2 1 483 +
Chr1	stalkie_big_nohaplotig	exon	23211095	23212135	99	+	.	Parent=FBgn0035371.2.mrna1;Target=FBgn0035371.2 484 1524 +
Chr1	stalkie_big_nohaplotig	CDS	23203096	23203578	.	+	0	Parent=FBgn0035371.2.mrna1;Target=FBgn0035371.2 1 483 +
Chr1	stalkie_big_nohaplotig	CDS	23211095	23212135	.	+	0	Parent=FBgn0035371.2.mrna1;Target=FBgn0035371.2 484 1524 +
Chr1	gffcl	locus	23213926	23214276	.	-	.	ID=RLOC_00006506;geneIDs=comp135341_c0_seq1.path1;transcripts=comp135341_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23213926	23214276	.	-	.	ID=comp135341_c0_seq1.mrna1;geneID=comp135341_c0_seq1.path1;Name=comp135341_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=348;mismatches=3;indels=0;unknowns=0;Target=comp135341_c0_seq1 351 1 .;CDS_Target=comp135341_c0_seq1 99 1 .;locus=RLOC_00006506
Chr1	stalkie_big_nohaplotig	exon	23213926	23214276	99	-	.	Parent=comp135341_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23214178	23214276	.	-	0	Parent=comp135341_c0_seq1.mrna1
Chr1	gffcl	locus	23219256	23220070	.	-	.	ID=RLOC_00006507;geneIDs=FBgn0035370.1.path1;transcripts=FBgn0035370.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23219256	23220070	.	-	.	ID=FBgn0035370.1.mrna1;geneID=FBgn0035370.1.path1;Name=FBgn0035370.1;Dir=sensecoverage=100.0;identity=99.7;matches=718;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006507
Chr1	stalkie_big_nohaplotig	exon	23219256	23219797	99	-	.	Parent=FBgn0035370.1.mrna1;Target=FBgn0035370.1 179 720 +
Chr1	stalkie_big_nohaplotig	exon	23219893	23220070	99	-	.	Parent=FBgn0035370.1.mrna1;Target=FBgn0035370.1 1 178 +
Chr1	stalkie_big_nohaplotig	CDS	23219256	23219797	.	-	2	Parent=FBgn0035370.1.mrna1;Target=FBgn0035370.1 179 720 +
Chr1	stalkie_big_nohaplotig	CDS	23219893	23220070	.	-	0	Parent=FBgn0035370.1.mrna1;Target=FBgn0035370.1 1 178 +
Chr1	gffcl	locus	23236698	23237928	.	-	.	ID=RLOC_00006508;geneIDs=FBgn0035372.1.path1;transcripts=FBgn0035372.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23236698	23237928	.	-	.	ID=FBgn0035372.1.mrna1;geneID=FBgn0035372.1.path1;Name=FBgn0035372.1;Dir=sensecoverage=100.0;identity=99.9;matches=995;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006508
Chr1	stalkie_big_nohaplotig	exon	23236698	23237118	100	-	.	Parent=FBgn0035372.1.mrna1;Target=FBgn0035372.1 576 996 +
Chr1	stalkie_big_nohaplotig	exon	23237177	23237373	100	-	.	Parent=FBgn0035372.1.mrna1;Target=FBgn0035372.1 379 575 +
Chr1	stalkie_big_nohaplotig	exon	23237444	23237547	100	-	.	Parent=FBgn0035372.1.mrna1;Target=FBgn0035372.1 275 378 +
Chr1	stalkie_big_nohaplotig	exon	23237655	23237928	99	-	.	Parent=FBgn0035372.1.mrna1;Target=FBgn0035372.1 1 274 +
Chr1	stalkie_big_nohaplotig	CDS	23236698	23237118	.	-	1	Parent=FBgn0035372.1.mrna1;Target=FBgn0035372.1 576 996 +
Chr1	stalkie_big_nohaplotig	CDS	23237177	23237373	.	-	0	Parent=FBgn0035372.1.mrna1;Target=FBgn0035372.1 379 575 +
Chr1	stalkie_big_nohaplotig	CDS	23237444	23237547	.	-	2	Parent=FBgn0035372.1.mrna1;Target=FBgn0035372.1 275 378 +
Chr1	stalkie_big_nohaplotig	CDS	23237655	23237928	.	-	0	Parent=FBgn0035372.1.mrna1;Target=FBgn0035372.1 1 274 +
Chr1	stalkie_big_nohaplotig	mRNA	23241097	23241450	.	+	.	ID=comp141314_c0_seq1.mrna1;geneID=comp141314_c0_seq1.path1;Name=comp141314_c0_seq1;Dir=indeterminatecoverage=88.9;identity=99.7;matches=353;mismatches=1;indels=0;unknowns=0;Target=comp141314_c0_seq1 354 1 .;CDS_Target=comp141314_c0_seq1 271 146 .;locus=RLOC_00006509
Chr1	stalkie_big_nohaplotig	exon	23241097	23241450	99	+	.	Parent=comp141314_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23241242	23241367	.	+	0	Parent=comp141314_c0_seq1.mrna1
Chr1	gffcl	locus	23248002	23248791	.	-	.	ID=RLOC_00006510;geneIDs=comp152327_c0_seq1.path1;transcripts=comp152327_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23248002	23248791	.	-	.	ID=comp152327_c0_seq1.mrna1;geneID=comp152327_c0_seq1.path1;Name=comp152327_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=778;mismatches=12;indels=0;unknowns=0;Target=comp152327_c0_seq1 790 1 .;CDS_Target=comp152327_c0_seq1 347 3 .;locus=RLOC_00006510
Chr1	stalkie_big_nohaplotig	exon	23248002	23248791	98	-	.	Parent=comp152327_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23248445	23248789	.	-	0	Parent=comp152327_c0_seq1.mrna1
Chr1	gffcl	locus	23267590	23268126	.	-	.	ID=RLOC_00006511;geneIDs=FBgn0052040.path1;transcripts=FBgn0052040.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23267590	23268126	.	-	.	ID=FBgn0052040.mrna1;geneID=FBgn0052040.path1;Name=FBgn0052040;Dir=indeterminatecoverage=100.0;identity=98.0;matches=526;mismatches=11;indels=0;unknowns=0;Target=FBgn0052040 537 1 .;locus=RLOC_00006511
Chr1	stalkie_big_nohaplotig	exon	23267590	23268126	97	-	.	Parent=FBgn0052040.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23267590	23268126	.	-	0	Parent=FBgn0052040.mrna1
Chr1	gffcl	locus	23279274	23282407	.	-	.	ID=RLOC_00006512;geneIDs=ORF2149.path1,comp162347_c2_seq1.path1;transcripts=comp162347_c2_seq1.mrna1,ORF2149.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23279274	23281168	.	-	.	ID=comp162347_c2_seq1.mrna1;geneID=comp162347_c2_seq1.path1;Name=comp162347_c2_seq1;Dir=sensecoverage=100.0;identity=99.0;matches=1650;mismatches=16;indels=0;unknowns=0;locus=RLOC_00006512
Chr1	stalkie_big_nohaplotig	exon	23279274	23279680	99	-	.	Parent=comp162347_c2_seq1.mrna1;Target=comp162347_c2_seq1 1260 1666 +
Chr1	stalkie_big_nohaplotig	exon	23279779	23279963	100	-	.	Parent=comp162347_c2_seq1.mrna1;Target=comp162347_c2_seq1 1075 1259 +
Chr1	stalkie_big_nohaplotig	exon	23280029	23280232	100	-	.	Parent=comp162347_c2_seq1.mrna1;Target=comp162347_c2_seq1 871 1074 +
Chr1	stalkie_big_nohaplotig	exon	23280299	23281168	98	-	.	Parent=comp162347_c2_seq1.mrna1;Target=comp162347_c2_seq1 1 870 +
Chr1	stalkie_big_nohaplotig	CDS	23279458	23279680	.	-	1	Parent=comp162347_c2_seq1.mrna1;Target=comp162347_c2_seq1 1260 1482 +
Chr1	stalkie_big_nohaplotig	CDS	23279779	23279963	.	-	0	Parent=comp162347_c2_seq1.mrna1;Target=comp162347_c2_seq1 1075 1259 +
Chr1	stalkie_big_nohaplotig	CDS	23280029	23280232	.	-	0	Parent=comp162347_c2_seq1.mrna1;Target=comp162347_c2_seq1 871 1074 +
Chr1	stalkie_big_nohaplotig	CDS	23280299	23280571	.	-	0	Parent=comp162347_c2_seq1.mrna1;Target=comp162347_c2_seq1 598 870 +
Chr1	stalkie_big_nohaplotig	mRNA	23279461	23282407	.	-	.	ID=ORF2149.mrna1;geneID=ORF2149.path1;Name=ORF2149;Dir=sensecoverage=100.0;identity=99.2;matches=902;mismatches=7;indels=0;unknowns=0;locus=RLOC_00006512
Chr1	stalkie_big_nohaplotig	exon	23279461	23279680	98	-	.	Parent=ORF2149.mrna1;Target=ORF2149 690 909 +
Chr1	stalkie_big_nohaplotig	exon	23279779	23279963	100	-	.	Parent=ORF2149.mrna1;Target=ORF2149 505 689 +
Chr1	stalkie_big_nohaplotig	exon	23280029	23280232	100	-	.	Parent=ORF2149.mrna1;Target=ORF2149 301 504 +
Chr1	stalkie_big_nohaplotig	exon	23280299	23280571	98	-	.	Parent=ORF2149.mrna1;Target=ORF2149 28 300 +
Chr1	stalkie_big_nohaplotig	exon	23282381	23282407	100	-	.	Parent=ORF2149.mrna1;Target=ORF2149 1 27 +
Chr1	stalkie_big_nohaplotig	CDS	23279461	23279680	.	-	1	Parent=ORF2149.mrna1;Target=ORF2149 690 909 +
Chr1	stalkie_big_nohaplotig	CDS	23279779	23279963	.	-	0	Parent=ORF2149.mrna1;Target=ORF2149 505 689 +
Chr1	stalkie_big_nohaplotig	CDS	23280029	23280232	.	-	0	Parent=ORF2149.mrna1;Target=ORF2149 301 504 +
Chr1	stalkie_big_nohaplotig	CDS	23280299	23280571	.	-	0	Parent=ORF2149.mrna1;Target=ORF2149 28 300 +
Chr1	stalkie_big_nohaplotig	CDS	23282381	23282407	.	-	0	Parent=ORF2149.mrna1;Target=ORF2149 1 27 +
Chr1	gffcl	locus	23284317	23284624	.	+	.	ID=RLOC_00006513;geneIDs=comp149751_c0_seq1.path1;transcripts=comp149751_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23284317	23284624	.	+	.	ID=comp149751_c0_seq1.mrna1;geneID=comp149751_c0_seq1.path1;Name=comp149751_c0_seq1;Dir=indeterminatecoverage=69.5;identity=95.8;matches=297;mismatches=9;indels=4;unknowns=0;Target=comp149751_c0_seq1 426 119 .;CDS_Target=comp149751_c0_seq1 154 119 .;locus=RLOC_00006513
Chr1	stalkie_big_nohaplotig	exon	23284317	23284624	95	+	.	Parent=comp149751_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23284317	23284352	.	+	0	Parent=comp149751_c0_seq1.mrna1
Chr1	gffcl	locus	23284775	23285389	.	+	.	ID=RLOC_00006514;geneIDs=comp158252_c0_seq1.path1;transcripts=comp158252_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23284775	23285389	.	+	.	ID=comp158252_c0_seq1.mrna1;geneID=comp158252_c0_seq1.path1;Name=comp158252_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.3;matches=594;mismatches=20;indels=9;unknowns=0;Target=comp158252_c0_seq1 622 1 .;CDS_Target=comp158252_c0_seq1 620 531 .;locus=RLOC_00006514
Chr1	stalkie_big_nohaplotig	exon	23284775	23285389	95	+	.	Parent=comp158252_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23285298	23285387	.	+	0	Parent=comp158252_c0_seq1.mrna1
Chr1	gffcl	locus	23286347	23287755	.	-	.	ID=RLOC_00006515;geneIDs=comp162873_c0_seq1.path1;transcripts=comp162873_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23286347	23287755	.	-	.	ID=comp162873_c0_seq1.mrna1;geneID=comp162873_c0_seq1.path1;Name=comp162873_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.1;matches=1378;mismatches=27;indels=29;unknowns=0;Target=comp162873_c0_seq1 1430 1 .;CDS_Target=comp162873_c0_seq1 1123 1061 .;locus=RLOC_00006515
Chr1	stalkie_big_nohaplotig	exon	23286347	23287755	96	-	.	Parent=comp162873_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23286654	23286716	.	-	0	Parent=comp162873_c0_seq1.mrna1
Chr1	gffcl	locus	23289113	23333697	.	-	.	ID=RLOC_00006516;geneIDs=FBgn0035896.1.path1;transcripts=FBgn0035896.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23289113	23333697	.	-	.	ID=FBgn0035896.1.mrna1;geneID=FBgn0035896.1.path1;Name=FBgn0035896.1;Dir=sensecoverage=100.0;identity=99.7;matches=619;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006516
Chr1	stalkie_big_nohaplotig	exon	23289113	23289618	99	-	.	Parent=FBgn0035896.1.mrna1;Target=FBgn0035896.1 116 621 +
Chr1	stalkie_big_nohaplotig	exon	23333583	23333697	100	-	.	Parent=FBgn0035896.1.mrna1;Target=FBgn0035896.1 1 115 +
Chr1	stalkie_big_nohaplotig	CDS	23289113	23289618	.	-	2	Parent=FBgn0035896.1.mrna1;Target=FBgn0035896.1 116 621 +
Chr1	stalkie_big_nohaplotig	CDS	23333583	23333697	.	-	0	Parent=FBgn0035896.1.mrna1;Target=FBgn0035896.1 1 115 +
Chr1	gffcl	locus	23354025	25139150	.	+	.	ID=RLOC_00006518;geneIDs=FBgn0020248.1.path1,comp156075_c2_seq1.path1;transcripts=comp156075_c2_seq1.mrna1,FBgn0020248.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23354025	25139150	.	+	.	ID=comp156075_c2_seq1.mrna1;geneID=comp156075_c2_seq1.path1;Name=comp156075_c2_seq1;Dir=indeterminatecoverage=94.0;identity=97.9;matches=812;mismatches=9;indels=8;unknowns=0;Target=comp156075_c2_seq1 135 1 .;locus=RLOC_00006518
Chr1	stalkie_big_nohaplotig	exon	23354025	23354758	98	+	.	Parent=comp156075_c2_seq1.mrna1;Target=comp156075_c2_seq1 729 1 .
Chr1	stalkie_big_nohaplotig	exon	23374044	23374063	95	+	.	Parent=comp156075_c2_seq1.mrna1;Target=comp156075_c2_seq1 749 730 .
Chr1	stalkie_big_nohaplotig	exon	23393622	23393640	78	+	.	Parent=comp156075_c2_seq1.mrna1;Target=comp156075_c2_seq1 943 928 .
Chr1	stalkie_big_nohaplotig	exon	23399599	23399601	100	+	.	Parent=comp156075_c2_seq1.mrna1;Target=comp156075_c2_seq1 965 963 .
Chr1	stalkie_big_nohaplotig	exon	23404209	23404213	100	+	.	Parent=comp156075_c2_seq1.mrna1;Target=comp156075_c2_seq1 970 966 .
Chr1	stalkie_big_nohaplotig	exon	23412128	23412132	100	+	.	Parent=comp156075_c2_seq1.mrna1;Target=comp156075_c2_seq1 975 971 .
Chr1	stalkie_big_nohaplotig	exon	23415014	23415018	100	+	.	Parent=comp156075_c2_seq1.mrna1;Target=comp156075_c2_seq1 980 976 .
Chr1	stalkie_big_nohaplotig	exon	23418791	23418803	76	+	.	Parent=comp156075_c2_seq1.mrna1;Target=comp156075_c2_seq1 993 981 .
Chr1	stalkie_big_nohaplotig	exon	25131269	25131273	100	+	.	Parent=comp156075_c2_seq1.mrna1;Target=comp156075_c2_seq1 998 994 .
Chr1	stalkie_big_nohaplotig	exon	25132717	25132724	100	+	.	Parent=comp156075_c2_seq1.mrna1;Target=comp156075_c2_seq1 1009 1002 .
Chr1	stalkie_big_nohaplotig	exon	25139141	25139150	100	+	.	Parent=comp156075_c2_seq1.mrna1;Target=comp156075_c2_seq1 1036 1027 .
Chr1	stalkie_big_nohaplotig	CDS	23354025	23354159	.	+	0	Parent=comp156075_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25123043	25136684	.	+	.	ID=FBgn0020248.1.mrna1;geneID=FBgn0020248.1.path1;Name=FBgn0020248.1;Dir=sensecoverage=100.0;identity=99.2;matches=1051;mismatches=8;indels=0;unknowns=0;locus=RLOC_00006518
Chr1	stalkie_big_nohaplotig	exon	25123043	25123156	96	+	.	Parent=FBgn0020248.1.mrna1;Target=FBgn0020248.1 1 114 +
Chr1	stalkie_big_nohaplotig	exon	25132686	25132916	100	+	.	Parent=FBgn0020248.1.mrna1;Target=FBgn0020248.1 115 345 +
Chr1	stalkie_big_nohaplotig	exon	25135815	25136079	99	+	.	Parent=FBgn0020248.1.mrna1;Target=FBgn0020248.1 346 610 +
Chr1	stalkie_big_nohaplotig	exon	25136154	25136300	100	+	.	Parent=FBgn0020248.1.mrna1;Target=FBgn0020248.1 611 757 +
Chr1	stalkie_big_nohaplotig	exon	25136383	25136684	99	+	.	Parent=FBgn0020248.1.mrna1;Target=FBgn0020248.1 758 1059 +
Chr1	stalkie_big_nohaplotig	CDS	25132686	25132916	.	+	0	Parent=FBgn0020248.1.mrna1;Target=FBgn0020248.1 115 345 +
Chr1	stalkie_big_nohaplotig	CDS	25135815	25136079	.	+	0	Parent=FBgn0020248.1.mrna1;Target=FBgn0020248.1 346 610 +
Chr1	stalkie_big_nohaplotig	CDS	25136154	25136300	.	+	2	Parent=FBgn0020248.1.mrna1;Target=FBgn0020248.1 611 757 +
Chr1	stalkie_big_nohaplotig	CDS	25136383	25136684	.	+	2	Parent=FBgn0020248.1.mrna1;Target=FBgn0020248.1 758 1059 +
Chr1	gffcl	locus	23361155	23367983	.	+	.	ID=RLOC_00006519;geneIDs=comp158568_c0_seq1.path1;transcripts=comp158568_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23361155	23367983	.	+	.	ID=comp158568_c0_seq1.mrna1;geneID=comp158568_c0_seq1.path1;Name=comp158568_c0_seq1;Dir=sensecoverage=50.6;identity=99.9;matches=1257;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006519
Chr1	stalkie_big_nohaplotig	exon	23361155	23361300	100	+	.	Parent=comp158568_c0_seq1.mrna1;Target=comp158568_c0_seq1 1226 1371 +
Chr1	stalkie_big_nohaplotig	exon	23361582	23361641	100	+	.	Parent=comp158568_c0_seq1.mrna1;Target=comp158568_c0_seq1 1372 1431 +
Chr1	stalkie_big_nohaplotig	exon	23363759	23363845	100	+	.	Parent=comp158568_c0_seq1.mrna1;Target=comp158568_c0_seq1 1432 1518 +
Chr1	stalkie_big_nohaplotig	exon	23363903	23364023	100	+	.	Parent=comp158568_c0_seq1.mrna1;Target=comp158568_c0_seq1 1519 1639 +
Chr1	stalkie_big_nohaplotig	exon	23364836	23364935	100	+	.	Parent=comp158568_c0_seq1.mrna1;Target=comp158568_c0_seq1 1640 1739 +
Chr1	stalkie_big_nohaplotig	exon	23365069	23365163	100	+	.	Parent=comp158568_c0_seq1.mrna1;Target=comp158568_c0_seq1 1740 1834 +
Chr1	stalkie_big_nohaplotig	exon	23365215	23365267	100	+	.	Parent=comp158568_c0_seq1.mrna1;Target=comp158568_c0_seq1 1835 1887 +
Chr1	stalkie_big_nohaplotig	exon	23367182	23367389	100	+	.	Parent=comp158568_c0_seq1.mrna1;Target=comp158568_c0_seq1 1888 2095 +
Chr1	stalkie_big_nohaplotig	exon	23367596	23367983	99	+	.	Parent=comp158568_c0_seq1.mrna1;Target=comp158568_c0_seq1 2096 2483 +
Chr1	stalkie_big_nohaplotig	CDS	23361155	23361300	.	+	0	Parent=comp158568_c0_seq1.mrna1;Target=comp158568_c0_seq1 1226 1371 +
Chr1	stalkie_big_nohaplotig	CDS	23361582	23361641	.	+	1	Parent=comp158568_c0_seq1.mrna1;Target=comp158568_c0_seq1 1372 1431 +
Chr1	stalkie_big_nohaplotig	CDS	23363759	23363845	.	+	1	Parent=comp158568_c0_seq1.mrna1;Target=comp158568_c0_seq1 1432 1518 +
Chr1	stalkie_big_nohaplotig	CDS	23363903	23364023	.	+	1	Parent=comp158568_c0_seq1.mrna1;Target=comp158568_c0_seq1 1519 1639 +
Chr1	stalkie_big_nohaplotig	CDS	23364836	23364935	.	+	0	Parent=comp158568_c0_seq1.mrna1;Target=comp158568_c0_seq1 1640 1739 +
Chr1	stalkie_big_nohaplotig	CDS	23365069	23365163	.	+	2	Parent=comp158568_c0_seq1.mrna1;Target=comp158568_c0_seq1 1740 1834 +
Chr1	stalkie_big_nohaplotig	CDS	23365215	23365267	.	+	0	Parent=comp158568_c0_seq1.mrna1;Target=comp158568_c0_seq1 1835 1887 +
Chr1	stalkie_big_nohaplotig	CDS	23367182	23367197	.	+	1	Parent=comp158568_c0_seq1.mrna1;Target=comp158568_c0_seq1 1888 1903 +
Chr1	gffcl	locus	23365365	23365597	.	-	.	ID=RLOC_00006520;geneIDs=comp140223_c0_seq1.path1;transcripts=comp140223_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23365365	23365597	.	-	.	ID=comp140223_c0_seq1.mrna1;geneID=comp140223_c0_seq1.path1;Name=comp140223_c0_seq1;Dir=indeterminatecoverage=97.1;identity=100.0;matches=233;mismatches=0;indels=0;unknowns=0;Target=comp140223_c0_seq1 235 3 .;CDS_Target=comp140223_c0_seq1 235 86 .;locus=RLOC_00006520
Chr1	stalkie_big_nohaplotig	exon	23365365	23365597	100	-	.	Parent=comp140223_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23365365	23365514	.	-	0	Parent=comp140223_c0_seq1.mrna1
Chr1	gffcl	locus	23373101	23389876	.	-	.	ID=RLOC_00006521;geneIDs=FBgn0027843.1.path1;transcripts=FBgn0027843.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23373101	23389876	.	-	.	ID=FBgn0027843.1.mrna1;geneID=FBgn0027843.1.path1;Name=FBgn0027843.1;Dir=sensecoverage=100.0;identity=99.4;matches=969;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006521
Chr1	stalkie_big_nohaplotig	exon	23373101	23373310	99	-	.	Parent=FBgn0027843.1.mrna1;Target=FBgn0027843.1 766 975 +
Chr1	stalkie_big_nohaplotig	exon	23373469	23373696	100	-	.	Parent=FBgn0027843.1.mrna1;Target=FBgn0027843.1 538 765 +
Chr1	stalkie_big_nohaplotig	exon	23374369	23374787	98	-	.	Parent=FBgn0027843.1.mrna1;Target=FBgn0027843.1 119 537 +
Chr1	stalkie_big_nohaplotig	exon	23375045	23375092	100	-	.	Parent=FBgn0027843.1.mrna1;Target=FBgn0027843.1 71 118 +
Chr1	stalkie_big_nohaplotig	exon	23389807	23389876	100	-	.	Parent=FBgn0027843.1.mrna1;Target=FBgn0027843.1 1 70 +
Chr1	stalkie_big_nohaplotig	CDS	23373101	23373310	.	-	0	Parent=FBgn0027843.1.mrna1;Target=FBgn0027843.1 766 975 +
Chr1	stalkie_big_nohaplotig	CDS	23373469	23373696	.	-	0	Parent=FBgn0027843.1.mrna1;Target=FBgn0027843.1 538 765 +
Chr1	stalkie_big_nohaplotig	CDS	23374369	23374787	.	-	2	Parent=FBgn0027843.1.mrna1;Target=FBgn0027843.1 119 537 +
Chr1	stalkie_big_nohaplotig	CDS	23375045	23375092	.	-	2	Parent=FBgn0027843.1.mrna1;Target=FBgn0027843.1 71 118 +
Chr1	stalkie_big_nohaplotig	CDS	23389807	23389876	.	-	0	Parent=FBgn0027843.1.mrna1;Target=FBgn0027843.1 1 70 +
Chr1	gffcl	locus	23437447	23440903	.	+	.	ID=RLOC_00006522;geneIDs=FBgn0036259.1.path1;transcripts=FBgn0036259.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23437447	23440903	.	+	.	ID=FBgn0036259.1.mrna1;geneID=FBgn0036259.1.path1;Name=FBgn0036259.1;Dir=sensecoverage=100.0;identity=100.0;matches=837;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006522
Chr1	stalkie_big_nohaplotig	exon	23437447	23437926	100	+	.	Parent=FBgn0036259.1.mrna1;Target=FBgn0036259.1 1 480 +
Chr1	stalkie_big_nohaplotig	exon	23440547	23440903	100	+	.	Parent=FBgn0036259.1.mrna1;Target=FBgn0036259.1 481 837 +
Chr1	stalkie_big_nohaplotig	CDS	23437447	23437926	.	+	0	Parent=FBgn0036259.1.mrna1;Target=FBgn0036259.1 1 480 +
Chr1	stalkie_big_nohaplotig	CDS	23440547	23440903	.	+	0	Parent=FBgn0036259.1.mrna1;Target=FBgn0036259.1 481 837 +
Chr1	gffcl	locus	23442040	23442334	.	+	.	ID=RLOC_00006523;geneIDs=comp153113_c0_seq1.path1;transcripts=comp153113_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23442040	23442334	.	+	.	ID=comp153113_c0_seq1.mrna1;geneID=comp153113_c0_seq1.path1;Name=comp153113_c0_seq1;Dir=indeterminatecoverage=95.6;identity=94.7;matches=287;mismatches=8;indels=8;unknowns=0;Target=comp153113_c0_seq1 317 15 .;CDS_Target=comp153113_c0_seq1 127 17 .;locus=RLOC_00006523
Chr1	stalkie_big_nohaplotig	exon	23442040	23442334	94	+	.	Parent=comp153113_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23442042	23442152	.	+	0	Parent=comp153113_c0_seq1.mrna1
Chr1	gffcl	locus	23448801	23478377	.	-	.	ID=RLOC_00006524;geneIDs=FBgn0013997.1.path1;transcripts=FBgn0013997.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23448801	23478377	.	-	.	ID=FBgn0013997.1.mrna1;geneID=FBgn0013997.1.path1;Name=FBgn0013997.1;Dir=sensecoverage=100.0;identity=99.8;matches=3849;mismatches=9;indels=0;unknowns=0;locus=RLOC_00006524
Chr1	stalkie_big_nohaplotig	exon	23448801	23448988	100	-	.	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 3671 3858 +
Chr1	stalkie_big_nohaplotig	exon	23450385	23450522	99	-	.	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 3533 3670 +
Chr1	stalkie_big_nohaplotig	exon	23450579	23450923	100	-	.	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 3188 3532 +
Chr1	stalkie_big_nohaplotig	exon	23451024	23451203	99	-	.	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 3008 3187 +
Chr1	stalkie_big_nohaplotig	exon	23451263	23451600	100	-	.	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 2670 3007 +
Chr1	stalkie_big_nohaplotig	exon	23451660	23452251	99	-	.	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 2078 2669 +
Chr1	stalkie_big_nohaplotig	exon	23452938	23453141	99	-	.	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 1874 2077 +
Chr1	stalkie_big_nohaplotig	exon	23453203	23453328	99	-	.	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 1748 1873 +
Chr1	stalkie_big_nohaplotig	exon	23453408	23454215	99	-	.	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 940 1747 +
Chr1	stalkie_big_nohaplotig	exon	23454274	23454644	100	-	.	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 569 939 +
Chr1	stalkie_big_nohaplotig	exon	23454715	23454856	100	-	.	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 427 568 +
Chr1	stalkie_big_nohaplotig	exon	23457649	23457845	99	-	.	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 230 426 +
Chr1	stalkie_big_nohaplotig	exon	23469060	23469173	98	-	.	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 116 229 +
Chr1	stalkie_big_nohaplotig	exon	23478263	23478377	100	-	.	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 1 115 +
Chr1	stalkie_big_nohaplotig	CDS	23448801	23448988	.	-	2	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 3671 3858 +
Chr1	stalkie_big_nohaplotig	CDS	23450385	23450522	.	-	2	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 3533 3670 +
Chr1	stalkie_big_nohaplotig	CDS	23450579	23450923	.	-	2	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 3188 3532 +
Chr1	stalkie_big_nohaplotig	CDS	23451024	23451203	.	-	2	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 3008 3187 +
Chr1	stalkie_big_nohaplotig	CDS	23451263	23451600	.	-	1	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 2670 3007 +
Chr1	stalkie_big_nohaplotig	CDS	23451660	23452251	.	-	2	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 2078 2669 +
Chr1	stalkie_big_nohaplotig	CDS	23452938	23453141	.	-	2	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 1874 2077 +
Chr1	stalkie_big_nohaplotig	CDS	23453203	23453328	.	-	2	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 1748 1873 +
Chr1	stalkie_big_nohaplotig	CDS	23453408	23454215	.	-	0	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 940 1747 +
Chr1	stalkie_big_nohaplotig	CDS	23454274	23454644	.	-	2	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 569 939 +
Chr1	stalkie_big_nohaplotig	CDS	23454715	23454856	.	-	0	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 427 568 +
Chr1	stalkie_big_nohaplotig	CDS	23457649	23457845	.	-	2	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 230 426 +
Chr1	stalkie_big_nohaplotig	CDS	23469060	23469173	.	-	2	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 116 229 +
Chr1	stalkie_big_nohaplotig	CDS	23478263	23478377	.	-	0	Parent=FBgn0013997.1.mrna1;Target=FBgn0013997.1 1 115 +
Chr1	gffcl	locus	23464204	23464642	.	-	.	ID=RLOC_00006525;geneIDs=comp146723_c0_seq1.path1;transcripts=comp146723_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23464204	23464642	.	-	.	ID=comp146723_c0_seq1.mrna1;geneID=comp146723_c0_seq1.path1;Name=comp146723_c0_seq1;Dir=indeterminatecoverage=99.6;identity=88.6;matches=411;mismatches=23;indels=30;unknowns=0;Target=comp146723_c0_seq1 459 1 .;CDS_Target=comp146723_c0_seq1 96 28 .;locus=RLOC_00006525
Chr1	stalkie_big_nohaplotig	exon	23464204	23464642	88	-	.	Parent=comp146723_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23464557	23464611	.	-	0	Parent=comp146723_c0_seq1.mrna1
Chr1	gffcl	locus	23465556	23466473	.	-	.	ID=RLOC_00006526;geneIDs=FBgn0052099.1.path1;transcripts=FBgn0052099.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23465556	23466473	.	-	.	ID=FBgn0052099.1.mrna1;geneID=FBgn0052099.1.path1;Name=FBgn0052099.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=916;mismatches=2;indels=0;unknowns=0;Target=FBgn0052099.1 918 1 .;locus=RLOC_00006526
Chr1	stalkie_big_nohaplotig	exon	23465556	23466473	99	-	.	Parent=FBgn0052099.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23465556	23466473	.	-	0	Parent=FBgn0052099.1.mrna1
Chr1	gffcl	locus	23478913	23487103	.	+	.	ID=RLOC_00006527;geneIDs=FBgn0031873.1.path1;transcripts=FBgn0031873.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23478913	23487103	.	+	.	ID=FBgn0031873.1.mrna1;geneID=FBgn0031873.1.path1;Name=FBgn0031873.1;Dir=sensecoverage=100.0;identity=99.9;matches=701;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006527
Chr1	stalkie_big_nohaplotig	exon	23478913	23479456	100	+	.	Parent=FBgn0031873.1.mrna1;Target=FBgn0031873.1 1 544 +
Chr1	stalkie_big_nohaplotig	exon	23486946	23487103	99	+	.	Parent=FBgn0031873.1.mrna1;Target=FBgn0031873.1 545 702 +
Chr1	stalkie_big_nohaplotig	CDS	23478913	23479456	.	+	0	Parent=FBgn0031873.1.mrna1;Target=FBgn0031873.1 1 544 +
Chr1	stalkie_big_nohaplotig	CDS	23486946	23487103	.	+	2	Parent=FBgn0031873.1.mrna1;Target=FBgn0031873.1 545 702 +
Chr1	gffcl	locus	23479955	23489501	.	-	.	ID=RLOC_00006528;geneIDs=FBgn0033842.1.path1;transcripts=FBgn0033842.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23479955	23489501	.	-	.	ID=FBgn0033842.1.mrna1;geneID=FBgn0033842.1.path1;Name=FBgn0033842.1;Dir=sensecoverage=100.0;identity=99.4;matches=1258;mismatches=8;indels=0;unknowns=0;locus=RLOC_00006528
Chr1	stalkie_big_nohaplotig	exon	23479955	23480066	99	-	.	Parent=FBgn0033842.1.mrna1;Target=FBgn0033842.1 1155 1266 +
Chr1	stalkie_big_nohaplotig	exon	23480129	23480262	99	-	.	Parent=FBgn0033842.1.mrna1;Target=FBgn0033842.1 1021 1154 +
Chr1	stalkie_big_nohaplotig	exon	23488353	23488723	100	-	.	Parent=FBgn0033842.1.mrna1;Target=FBgn0033842.1 650 1020 +
Chr1	stalkie_big_nohaplotig	exon	23488799	23489345	99	-	.	Parent=FBgn0033842.1.mrna1;Target=FBgn0033842.1 103 649 +
Chr1	stalkie_big_nohaplotig	exon	23489400	23489501	98	-	.	Parent=FBgn0033842.1.mrna1;Target=FBgn0033842.1 1 102 +
Chr1	stalkie_big_nohaplotig	CDS	23479955	23480066	.	-	1	Parent=FBgn0033842.1.mrna1;Target=FBgn0033842.1 1155 1266 +
Chr1	stalkie_big_nohaplotig	CDS	23480129	23480262	.	-	0	Parent=FBgn0033842.1.mrna1;Target=FBgn0033842.1 1021 1154 +
Chr1	stalkie_big_nohaplotig	CDS	23488353	23488723	.	-	2	Parent=FBgn0033842.1.mrna1;Target=FBgn0033842.1 650 1020 +
Chr1	stalkie_big_nohaplotig	CDS	23488799	23489345	.	-	0	Parent=FBgn0033842.1.mrna1;Target=FBgn0033842.1 103 649 +
Chr1	stalkie_big_nohaplotig	CDS	23489400	23489501	.	-	0	Parent=FBgn0033842.1.mrna1;Target=FBgn0033842.1 1 102 +
Chr1	gffcl	locus	23484261	23507775	.	+	.	ID=RLOC_00006529;geneIDs=FBgn0036207.1.path1;transcripts=FBgn0036207.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23484261	23507775	.	+	.	ID=FBgn0036207.1.mrna1;geneID=FBgn0036207.1.path1;Name=FBgn0036207.1;Dir=sensecoverage=100.0;identity=99.8;matches=1677;mismatches=3;indels=0;unknowns=0;locus=RLOC_00006529
Chr1	stalkie_big_nohaplotig	exon	23484261	23484314	100	+	.	Parent=FBgn0036207.1.mrna1;Target=FBgn0036207.1 1 54 +
Chr1	stalkie_big_nohaplotig	exon	23491839	23492386	100	+	.	Parent=FBgn0036207.1.mrna1;Target=FBgn0036207.1 55 602 +
Chr1	stalkie_big_nohaplotig	exon	23494400	23494708	100	+	.	Parent=FBgn0036207.1.mrna1;Target=FBgn0036207.1 603 911 +
Chr1	stalkie_big_nohaplotig	exon	23506838	23507015	99	+	.	Parent=FBgn0036207.1.mrna1;Target=FBgn0036207.1 912 1089 +
Chr1	stalkie_big_nohaplotig	exon	23507185	23507775	99	+	.	Parent=FBgn0036207.1.mrna1;Target=FBgn0036207.1 1090 1680 +
Chr1	stalkie_big_nohaplotig	CDS	23484261	23484314	.	+	0	Parent=FBgn0036207.1.mrna1;Target=FBgn0036207.1 1 54 +
Chr1	stalkie_big_nohaplotig	CDS	23491839	23492386	.	+	0	Parent=FBgn0036207.1.mrna1;Target=FBgn0036207.1 55 602 +
Chr1	stalkie_big_nohaplotig	CDS	23494400	23494708	.	+	1	Parent=FBgn0036207.1.mrna1;Target=FBgn0036207.1 603 911 +
Chr1	stalkie_big_nohaplotig	CDS	23506838	23507015	.	+	1	Parent=FBgn0036207.1.mrna1;Target=FBgn0036207.1 912 1089 +
Chr1	stalkie_big_nohaplotig	CDS	23507185	23507775	.	+	0	Parent=FBgn0036207.1.mrna1;Target=FBgn0036207.1 1090 1680 +
Chr1	gffcl	locus	23496248	23496960	.	+	.	ID=RLOC_00006530;geneIDs=ORF2350.path2;transcripts=ORF2350.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	23496248	23496960	.	+	.	ID=ORF2350.mrna2;geneID=ORF2350.path2;Name=ORF2350;Dir=indeterminatecoverage=81.7;identity=100.0;matches=713;mismatches=0;indels=0;unknowns=0;Target=ORF2350 873 161 .;locus=RLOC_00006530
Chr1	stalkie_big_nohaplotig	exon	23496248	23496960	100	+	.	Parent=ORF2350.mrna2
Chr1	stalkie_big_nohaplotig	CDS	23496248	23496960	.	+	1	Parent=ORF2350.mrna2
Chr1	gffcl	locus	23497068	23497719	.	+	.	ID=RLOC_00006531;geneIDs=comp150126_c1_seq1.path1;transcripts=comp150126_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23497068	23497719	.	+	.	ID=comp150126_c1_seq1.mrna1;geneID=comp150126_c1_seq1.path1;Name=comp150126_c1_seq1;Dir=indeterminatecoverage=99.7;identity=99.8;matches=601;mismatches=1;indels=0;unknowns=0;Target=comp150126_c1_seq1 278 129 .;locus=RLOC_00006531
Chr1	stalkie_big_nohaplotig	exon	23497068	23497643	100	+	.	Parent=comp150126_c1_seq1.mrna1;Target=comp150126_c1_seq1 578 3 .
Chr1	stalkie_big_nohaplotig	exon	23497694	23497719	96	+	.	Parent=comp150126_c1_seq1.mrna1;Target=comp150126_c1_seq1 604 579 .
Chr1	stalkie_big_nohaplotig	CDS	23497194	23497343	.	+	0	Parent=comp150126_c1_seq1.mrna1
Chr1	gffcl	locus	23516544	23520082	.	+	.	ID=RLOC_00006532;geneIDs=ORF3155.path1,FBgn0036207.2.path1;transcripts=FBgn0036207.2.mrna1,ORF3155.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23516544	23520082	.	+	.	ID=FBgn0036207.2.mrna1;geneID=FBgn0036207.2.path1;Name=FBgn0036207.2;Dir=sensecoverage=100.0;identity=99.8;matches=1548;mismatches=2;indels=1;unknowns=0;Target=FBgn0036207.2 3 50 +;locus=RLOC_00006532
Chr1	stalkie_big_nohaplotig	exon	23516544	23516650	99	+	.	Parent=FBgn0036207.2.mrna1;Target=FBgn0036207.2 1 108 +
Chr1	stalkie_big_nohaplotig	exon	23516709	23517253	99	+	.	Parent=FBgn0036207.2.mrna1;Target=FBgn0036207.2 109 653 +
Chr1	stalkie_big_nohaplotig	exon	23517361	23517735	100	+	.	Parent=FBgn0036207.2.mrna1;Target=FBgn0036207.2 654 1028 +
Chr1	stalkie_big_nohaplotig	exon	23517796	23518008	99	+	.	Parent=FBgn0036207.2.mrna1;Target=FBgn0036207.2 1029 1241 +
Chr1	stalkie_big_nohaplotig	exon	23519773	23520082	100	+	.	Parent=FBgn0036207.2.mrna1;Target=FBgn0036207.2 1242 1551 +
Chr1	stalkie_big_nohaplotig	CDS	23516546	23516592	.	+	0	Parent=FBgn0036207.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23517987	23519423	.	+	.	ID=ORF3155.mrna1;geneID=ORF3155.path1;Name=ORF3155;Dir=sensecoverage=100.0;identity=98.7;matches=751;mismatches=10;indels=0;unknowns=0;locus=RLOC_00006532
Chr1	stalkie_big_nohaplotig	exon	23517987	23518008	100	+	.	Parent=ORF3155.mrna1;Target=ORF3155 1 22 +
Chr1	stalkie_big_nohaplotig	exon	23518555	23518747	100	+	.	Parent=ORF3155.mrna1;Target=ORF3155 24 216 +
Chr1	stalkie_big_nohaplotig	exon	23518815	23518997	99	+	.	Parent=ORF3155.mrna1;Target=ORF3155 217 399 +
Chr1	stalkie_big_nohaplotig	exon	23519061	23519423	97	+	.	Parent=ORF3155.mrna1;Target=ORF3155 400 762 +
Chr1	stalkie_big_nohaplotig	CDS	23517989	23518008	.	+	0	Parent=ORF3155.mrna1;Target=ORF3155 3 22 +
Chr1	stalkie_big_nohaplotig	CDS	23518555	23518593	.	+	1	Parent=ORF3155.mrna1;Target=ORF3155 24 62 +
Chr1	gffcl	locus	23520203	23521647	.	-	.	ID=RLOC_00006533;geneIDs=FBgn0040308.1.path1;transcripts=FBgn0040308.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23520203	23521647	.	-	.	ID=FBgn0040308.1.mrna1;geneID=FBgn0040308.1.path1;Name=FBgn0040308.1;Dir=sensecoverage=99.5;identity=99.6;matches=761;mismatches=3;indels=0;unknowns=0;locus=RLOC_00006533
Chr1	stalkie_big_nohaplotig	exon	23520203	23520250	100	-	.	Parent=FBgn0040308.1.mrna1;Target=FBgn0040308.1 721 768 +
Chr1	stalkie_big_nohaplotig	exon	23520319	23520724	99	-	.	Parent=FBgn0040308.1.mrna1;Target=FBgn0040308.1 315 720 +
Chr1	stalkie_big_nohaplotig	exon	23521273	23521390	99	-	.	Parent=FBgn0040308.1.mrna1;Target=FBgn0040308.1 197 314 +
Chr1	stalkie_big_nohaplotig	exon	23521456	23521647	100	-	.	Parent=FBgn0040308.1.mrna1;Target=FBgn0040308.1 5 196 +
Chr1	stalkie_big_nohaplotig	CDS	23520203	23520250	.	-	0	Parent=FBgn0040308.1.mrna1;Target=FBgn0040308.1 721 768 +
Chr1	stalkie_big_nohaplotig	CDS	23520319	23520724	.	-	1	Parent=FBgn0040308.1.mrna1;Target=FBgn0040308.1 315 720 +
Chr1	stalkie_big_nohaplotig	CDS	23521273	23521390	.	-	2	Parent=FBgn0040308.1.mrna1;Target=FBgn0040308.1 197 314 +
Chr1	stalkie_big_nohaplotig	CDS	23521456	23521645	.	-	0	Parent=FBgn0040308.1.mrna1;Target=FBgn0040308.1 7 196 +
Chr1	gffcl	locus	23530722	23536983	.	+	.	ID=RLOC_00006534;geneIDs=FBgn0052056.4.path1;transcripts=FBgn0052056.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23530722	23536983	.	+	.	ID=FBgn0052056.4.mrna1;geneID=FBgn0052056.4.path1;Name=FBgn0052056.4;Dir=sensecoverage=88.3;identity=99.8;matches=986;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006534
Chr1	stalkie_big_nohaplotig	exon	23530722	23531002	99	+	.	Parent=FBgn0052056.4.mrna1;Target=FBgn0052056.4 132 412 +
Chr1	stalkie_big_nohaplotig	exon	23536143	23536633	99	+	.	Parent=FBgn0052056.4.mrna1;Target=FBgn0052056.4 413 903 +
Chr1	stalkie_big_nohaplotig	exon	23536701	23536859	100	+	.	Parent=FBgn0052056.4.mrna1;Target=FBgn0052056.4 904 1062 +
Chr1	stalkie_big_nohaplotig	exon	23536927	23536983	100	+	.	Parent=FBgn0052056.4.mrna1;Target=FBgn0052056.4 1063 1119 +
Chr1	stalkie_big_nohaplotig	CDS	23530795	23531002	.	+	0	Parent=FBgn0052056.4.mrna1;Target=FBgn0052056.4 205 412 +
Chr1	stalkie_big_nohaplotig	CDS	23536143	23536633	.	+	2	Parent=FBgn0052056.4.mrna1;Target=FBgn0052056.4 413 903 +
Chr1	stalkie_big_nohaplotig	CDS	23536701	23536859	.	+	0	Parent=FBgn0052056.4.mrna1;Target=FBgn0052056.4 904 1062 +
Chr1	stalkie_big_nohaplotig	CDS	23536927	23536983	.	+	0	Parent=FBgn0052056.4.mrna1;Target=FBgn0052056.4 1063 1119 +
Chr1	gffcl	locus	23534747	23535763	.	+	.	ID=RLOC_00006535;geneIDs=comp160269_c1_seq1.path1;transcripts=comp160269_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23534747	23535763	.	+	.	ID=comp160269_c1_seq1.mrna1;geneID=comp160269_c1_seq1.path1;Name=comp160269_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1016;mismatches=1;indels=2;unknowns=0;Target=comp160269_c1_seq1 1019 1 .;CDS_Target=comp160269_c1_seq1 231 154 .;locus=RLOC_00006535
Chr1	stalkie_big_nohaplotig	exon	23534747	23535763	99	+	.	Parent=comp160269_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23534900	23534977	.	+	0	Parent=comp160269_c1_seq1.mrna1
Chr1	gffcl	locus	23537427	23537798	.	-	.	ID=RLOC_00006536;geneIDs=comp122119_c0_seq1.path1;transcripts=comp122119_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23537427	23537798	.	-	.	ID=comp122119_c0_seq1.mrna1;geneID=comp122119_c0_seq1.path1;Name=comp122119_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=368;mismatches=4;indels=1;unknowns=0;Target=comp122119_c0_seq1 373 1 .;CDS_Target=comp122119_c0_seq1 83 42 .;locus=RLOC_00006536
Chr1	stalkie_big_nohaplotig	exon	23537427	23537798	98	-	.	Parent=comp122119_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23537716	23537757	.	-	0	Parent=comp122119_c0_seq1.mrna1
Chr1	gffcl	locus	23542255	23543603	.	+	.	ID=RLOC_00006537;geneIDs=FBgn0052056.3.path1;transcripts=FBgn0052056.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23542255	23543603	.	+	.	ID=FBgn0052056.3.mrna1;geneID=FBgn0052056.3.path1;Name=FBgn0052056.3;Dir=sensecoverage=96.7;identity=99.1;matches=629;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006537
Chr1	stalkie_big_nohaplotig	exon	23542255	23542709	99	+	.	Parent=FBgn0052056.3.mrna1;Target=FBgn0052056.3 23 477 +
Chr1	stalkie_big_nohaplotig	exon	23542816	23542974	98	+	.	Parent=FBgn0052056.3.mrna1;Target=FBgn0052056.3 478 636 +
Chr1	stalkie_big_nohaplotig	exon	23543583	23543603	100	+	.	Parent=FBgn0052056.3.mrna1;Target=FBgn0052056.3 637 657 +
Chr1	stalkie_big_nohaplotig	CDS	23542257	23542709	.	+	0	Parent=FBgn0052056.3.mrna1;Target=FBgn0052056.3 25 477 +
Chr1	stalkie_big_nohaplotig	CDS	23542816	23542974	.	+	0	Parent=FBgn0052056.3.mrna1;Target=FBgn0052056.3 478 636 +
Chr1	stalkie_big_nohaplotig	CDS	23543583	23543603	.	+	0	Parent=FBgn0052056.3.mrna1;Target=FBgn0052056.3 637 657 +
Chr1	gffcl	locus	23545969	23547222	.	+	.	ID=RLOC_00006538;geneIDs=FBgn0052056.2.path1;transcripts=FBgn0052056.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23545969	23547222	.	+	.	ID=FBgn0052056.2.mrna1;geneID=FBgn0052056.2.path1;Name=FBgn0052056.2;Dir=sensecoverage=100.0;identity=98.5;matches=668;mismatches=10;indels=0;unknowns=0;locus=RLOC_00006538
Chr1	stalkie_big_nohaplotig	exon	23545969	23546460	97	+	.	Parent=FBgn0052056.2.mrna1;Target=FBgn0052056.2 1 492 +
Chr1	stalkie_big_nohaplotig	exon	23546556	23546714	100	+	.	Parent=FBgn0052056.2.mrna1;Target=FBgn0052056.2 493 651 +
Chr1	stalkie_big_nohaplotig	exon	23547196	23547222	100	+	.	Parent=FBgn0052056.2.mrna1;Target=FBgn0052056.2 652 678 +
Chr1	stalkie_big_nohaplotig	CDS	23545969	23546460	.	+	0	Parent=FBgn0052056.2.mrna1;Target=FBgn0052056.2 1 492 +
Chr1	stalkie_big_nohaplotig	CDS	23546556	23546714	.	+	0	Parent=FBgn0052056.2.mrna1;Target=FBgn0052056.2 493 651 +
Chr1	stalkie_big_nohaplotig	CDS	23547196	23547222	.	+	0	Parent=FBgn0052056.2.mrna1;Target=FBgn0052056.2 652 678 +
Chr1	gffcl	locus	23550579	23558816	.	+	.	ID=RLOC_00006539;geneIDs=FBgn0052056.1.path1;transcripts=FBgn0052056.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23550579	23558816	.	+	.	ID=FBgn0052056.1.mrna1;geneID=FBgn0052056.1.path1;Name=FBgn0052056.1;Dir=sensecoverage=100.0;identity=99.9;matches=827;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006539
Chr1	stalkie_big_nohaplotig	exon	23550579	23550720	100	+	.	Parent=FBgn0052056.1.mrna1;Target=FBgn0052056.1 1 142 +
Chr1	stalkie_big_nohaplotig	exon	23558002	23558501	99	+	.	Parent=FBgn0052056.1.mrna1;Target=FBgn0052056.1 143 642 +
Chr1	stalkie_big_nohaplotig	exon	23558572	23558730	100	+	.	Parent=FBgn0052056.1.mrna1;Target=FBgn0052056.1 643 801 +
Chr1	stalkie_big_nohaplotig	exon	23558790	23558816	100	+	.	Parent=FBgn0052056.1.mrna1;Target=FBgn0052056.1 802 828 +
Chr1	stalkie_big_nohaplotig	CDS	23550579	23550720	.	+	0	Parent=FBgn0052056.1.mrna1;Target=FBgn0052056.1 1 142 +
Chr1	stalkie_big_nohaplotig	CDS	23558002	23558501	.	+	2	Parent=FBgn0052056.1.mrna1;Target=FBgn0052056.1 143 642 +
Chr1	stalkie_big_nohaplotig	CDS	23558572	23558730	.	+	0	Parent=FBgn0052056.1.mrna1;Target=FBgn0052056.1 643 801 +
Chr1	stalkie_big_nohaplotig	CDS	23558790	23558816	.	+	0	Parent=FBgn0052056.1.mrna1;Target=FBgn0052056.1 802 828 +
Chr1	gffcl	locus	23596777	23597681	.	+	.	ID=RLOC_00006540;geneIDs=comp113163_c0_seq1.path1;transcripts=comp113163_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23596777	23597681	.	+	.	ID=comp113163_c0_seq1.mrna1;geneID=comp113163_c0_seq1.path1;Name=comp113163_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.7;matches=893;mismatches=8;indels=4;unknowns=0;Target=comp113163_c0_seq1 902 2 .;CDS_Target=comp113163_c0_seq1 372 166 .;locus=RLOC_00006540
Chr1	stalkie_big_nohaplotig	exon	23596777	23597681	98	+	.	Parent=comp113163_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23596941	23597147	.	+	0	Parent=comp113163_c0_seq1.mrna1
Chr1	gffcl	locus	23598028	23599370	.	+	.	ID=RLOC_00006541;geneIDs=ORF883.path1;transcripts=ORF883.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23598028	23599370	.	+	.	ID=ORF883.mrna1;geneID=ORF883.path1;Name=ORF883;Dir=indeterminatecoverage=98.4;identity=99.5;matches=1336;mismatches=7;indels=0;unknowns=0;Target=ORF883 1343 1 .;CDS_Target=ORF883 1341 1 .;locus=RLOC_00006541
Chr1	stalkie_big_nohaplotig	exon	23598028	23599370	99	+	.	Parent=ORF883.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23598028	23599368	.	+	0	Parent=ORF883.mrna1
Chr1	gffcl	locus	23602739	23620128	.	+	.	ID=RLOC_00006542;geneIDs=FBgn0261808.1.path1,comp115848_c0_seq1.path1,comp143328_c0_seq1.path1;transcripts=FBgn0261808.1.mrna1,comp143328_c0_seq1.mrna1,comp115848_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23602739	23620128	.	+	.	ID=FBgn0261808.1.mrna1;geneID=FBgn0261808.1.path1;Name=FBgn0261808.1;Dir=sensecoverage=100.0;identity=99.5;matches=1287;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006542
Chr1	stalkie_big_nohaplotig	exon	23602739	23602827	100	+	.	Parent=FBgn0261808.1.mrna1;Target=FBgn0261808.1 1 89 +
Chr1	stalkie_big_nohaplotig	exon	23618653	23618885	99	+	.	Parent=FBgn0261808.1.mrna1;Target=FBgn0261808.1 90 322 +
Chr1	stalkie_big_nohaplotig	exon	23619024	23619089	100	+	.	Parent=FBgn0261808.1.mrna1;Target=FBgn0261808.1 323 388 +
Chr1	stalkie_big_nohaplotig	exon	23619162	23619925	99	+	.	Parent=FBgn0261808.1.mrna1;Target=FBgn0261808.1 389 1152 +
Chr1	stalkie_big_nohaplotig	exon	23619988	23620128	99	+	.	Parent=FBgn0261808.1.mrna1;Target=FBgn0261808.1 1153 1293 +
Chr1	stalkie_big_nohaplotig	CDS	23602739	23602827	.	+	0	Parent=FBgn0261808.1.mrna1;Target=FBgn0261808.1 1 89 +
Chr1	stalkie_big_nohaplotig	CDS	23618653	23618885	.	+	1	Parent=FBgn0261808.1.mrna1;Target=FBgn0261808.1 90 322 +
Chr1	stalkie_big_nohaplotig	CDS	23619024	23619089	.	+	2	Parent=FBgn0261808.1.mrna1;Target=FBgn0261808.1 323 388 +
Chr1	stalkie_big_nohaplotig	CDS	23619162	23619925	.	+	2	Parent=FBgn0261808.1.mrna1;Target=FBgn0261808.1 389 1152 +
Chr1	stalkie_big_nohaplotig	CDS	23619988	23620128	.	+	0	Parent=FBgn0261808.1.mrna1;Target=FBgn0261808.1 1153 1293 +
Chr1	stalkie_big_nohaplotig	mRNA	23602804	23618676	.	+	.	ID=comp143328_c0_seq1.mrna1;geneID=comp143328_c0_seq1.path1;Name=comp143328_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=207;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006542
Chr1	stalkie_big_nohaplotig	exon	23602804	23602827	100	+	.	Parent=comp143328_c0_seq1.mrna1;Target=comp143328_c0_seq1 184 207 -
Chr1	stalkie_big_nohaplotig	exon	23616032	23616190	100	+	.	Parent=comp143328_c0_seq1.mrna1;Target=comp143328_c0_seq1 25 183 -
Chr1	stalkie_big_nohaplotig	exon	23618653	23618676	100	+	.	Parent=comp143328_c0_seq1.mrna1;Target=comp143328_c0_seq1 1 24 -
Chr1	stalkie_big_nohaplotig	CDS	23602805	23602827	.	+	0	Parent=comp143328_c0_seq1.mrna1;Target=comp143328_c0_seq1 184 206 .
Chr1	stalkie_big_nohaplotig	CDS	23616032	23616190	.	+	1	Parent=comp143328_c0_seq1.mrna1;Target=comp143328_c0_seq1 25 183 .
Chr1	stalkie_big_nohaplotig	CDS	23618653	23618674	.	+	1	Parent=comp143328_c0_seq1.mrna1;Target=comp143328_c0_seq1 3 24 .
Chr1	stalkie_big_nohaplotig	mRNA	23611275	23618674	.	+	.	ID=comp115848_c0_seq1.mrna1;geneID=comp115848_c0_seq1.path1;Name=comp115848_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=333;mismatches=1;indels=0;unknowns=0;Target=comp115848_c0_seq1 3 125 +;locus=RLOC_00006542
Chr1	stalkie_big_nohaplotig	exon	23611275	23611586	99	+	.	Parent=comp115848_c0_seq1.mrna1;Target=comp115848_c0_seq1 1 312 +
Chr1	stalkie_big_nohaplotig	exon	23618653	23618674	100	+	.	Parent=comp115848_c0_seq1.mrna1;Target=comp115848_c0_seq1 313 334 +
Chr1	stalkie_big_nohaplotig	CDS	23611277	23611399	.	+	0	Parent=comp115848_c0_seq1.mrna1
Chr1	gffcl	locus	23638330	23651465	.	-	.	ID=RLOC_00006543;geneIDs=FBgn0036101.1.path1;transcripts=FBgn0036101.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23638330	23651465	.	-	.	ID=FBgn0036101.1.mrna1;geneID=FBgn0036101.1.path1;Name=FBgn0036101.1;Dir=sensecoverage=100.0;identity=100.0;matches=642;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006543
Chr1	stalkie_big_nohaplotig	exon	23638330	23638500	100	-	.	Parent=FBgn0036101.1.mrna1;Target=FBgn0036101.1 472 642 +
Chr1	stalkie_big_nohaplotig	exon	23638563	23638921	100	-	.	Parent=FBgn0036101.1.mrna1;Target=FBgn0036101.1 113 471 +
Chr1	stalkie_big_nohaplotig	exon	23638987	23639032	100	-	.	Parent=FBgn0036101.1.mrna1;Target=FBgn0036101.1 67 112 +
Chr1	stalkie_big_nohaplotig	exon	23651400	23651465	100	-	.	Parent=FBgn0036101.1.mrna1;Target=FBgn0036101.1 1 66 +
Chr1	stalkie_big_nohaplotig	CDS	23638330	23638500	.	-	0	Parent=FBgn0036101.1.mrna1;Target=FBgn0036101.1 472 642 +
Chr1	stalkie_big_nohaplotig	CDS	23638563	23638921	.	-	2	Parent=FBgn0036101.1.mrna1;Target=FBgn0036101.1 113 471 +
Chr1	stalkie_big_nohaplotig	CDS	23638987	23639032	.	-	0	Parent=FBgn0036101.1.mrna1;Target=FBgn0036101.1 67 112 +
Chr1	stalkie_big_nohaplotig	CDS	23651400	23651465	.	-	0	Parent=FBgn0036101.1.mrna1;Target=FBgn0036101.1 1 66 +
Chr1	gffcl	locus	23660874	23668017	.	-	.	ID=RLOC_00006544;geneIDs=FBgn0036690.1.path1;transcripts=FBgn0036690.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23660874	23668017	.	-	.	ID=FBgn0036690.1.mrna1;geneID=FBgn0036690.1.path1;Name=FBgn0036690.1;Dir=sensecoverage=100.0;identity=99.8;matches=407;mismatches=0;indels=1;unknowns=0;locus=RLOC_00006544
Chr1	stalkie_big_nohaplotig	exon	23660874	23661039	99	-	.	Parent=FBgn0036690.1.mrna1;Target=FBgn0036690.1 242 408 +
Chr1	stalkie_big_nohaplotig	exon	23663396	23663600	100	-	.	Parent=FBgn0036690.1.mrna1;Target=FBgn0036690.1 37 241 +
Chr1	stalkie_big_nohaplotig	exon	23667982	23668017	100	-	.	Parent=FBgn0036690.1.mrna1;Target=FBgn0036690.1 1 36 +
Chr1	stalkie_big_nohaplotig	CDS	23660874	23661039	.	-	2	Parent=FBgn0036690.1.mrna1;Target=FBgn0036690.1 242 408 +
Chr1	stalkie_big_nohaplotig	CDS	23663396	23663600	.	-	0	Parent=FBgn0036690.1.mrna1;Target=FBgn0036690.1 37 241 +
Chr1	stalkie_big_nohaplotig	CDS	23667982	23668017	.	-	0	Parent=FBgn0036690.1.mrna1;Target=FBgn0036690.1 1 36 +
Chr1	gffcl	locus	23661922	23662525	.	+	.	ID=RLOC_00006545;geneIDs=comp138657_c0_seq1.path1;transcripts=comp138657_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23661922	23662525	.	+	.	ID=comp138657_c0_seq1.mrna1;geneID=comp138657_c0_seq1.path1;Name=comp138657_c0_seq1;Dir=indeterminatecoverage=95.5;identity=94.6;matches=556;mismatches=19;indels=13;unknowns=0;Target=comp138657_c0_seq1 578 516 .;locus=RLOC_00006545
Chr1	stalkie_big_nohaplotig	exon	23661922	23662010	100	+	.	Parent=comp138657_c0_seq1.mrna1;Target=comp138657_c0_seq1 117 29 .
Chr1	stalkie_big_nohaplotig	exon	23662035	23662525	93	+	.	Parent=comp138657_c0_seq1.mrna1;Target=comp138657_c0_seq1 624 131 .
Chr1	stalkie_big_nohaplotig	CDS	23662425	23662483	.	+	0	Parent=comp138657_c0_seq1.mrna1
Chr1	gffcl	locus	23691806	23694784	.	+	.	ID=RLOC_00006546;geneIDs=FBgn0259933.1.path1;transcripts=FBgn0259933.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23691806	23694784	.	+	.	ID=FBgn0259933.1.mrna1;geneID=FBgn0259933.1.path1;Name=FBgn0259933.1;Dir=sensecoverage=100.0;identity=100.0;matches=288;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006546
Chr1	stalkie_big_nohaplotig	exon	23691806	23691956	100	+	.	Parent=FBgn0259933.1.mrna1;Target=FBgn0259933.1 1 151 +
Chr1	stalkie_big_nohaplotig	exon	23694648	23694784	100	+	.	Parent=FBgn0259933.1.mrna1;Target=FBgn0259933.1 152 288 +
Chr1	stalkie_big_nohaplotig	CDS	23691806	23691956	.	+	0	Parent=FBgn0259933.1.mrna1;Target=FBgn0259933.1 1 151 +
Chr1	stalkie_big_nohaplotig	CDS	23694648	23694784	.	+	2	Parent=FBgn0259933.1.mrna1;Target=FBgn0259933.1 152 288 +
Chr1	gffcl	locus	23694980	23695888	.	+	.	ID=RLOC_00006547;geneIDs=FBgn0035436.1.path1;transcripts=FBgn0035436.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23694980	23695888	.	+	.	ID=FBgn0035436.1.mrna1;geneID=FBgn0035436.1.path1;Name=FBgn0035436.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=908;mismatches=1;indels=0;unknowns=0;Target=FBgn0035436.1 909 1 .;locus=RLOC_00006547
Chr1	stalkie_big_nohaplotig	exon	23694980	23695888	99	+	.	Parent=FBgn0035436.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23694980	23695888	.	+	0	Parent=FBgn0035436.1.mrna1
Chr1	gffcl	locus	23698782	23701509	.	-	.	ID=RLOC_00006548;geneIDs=FBgn0035437.1.path1;transcripts=FBgn0035437.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23698782	23701509	.	-	.	ID=FBgn0035437.1.mrna1;geneID=FBgn0035437.1.path1;Name=FBgn0035437.1;Dir=sensecoverage=100.0;identity=100.0;matches=2672;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006548
Chr1	stalkie_big_nohaplotig	exon	23698782	23700462	99	-	.	Parent=FBgn0035437.1.mrna1;Target=FBgn0035437.1 993 2673 +
Chr1	stalkie_big_nohaplotig	exon	23700518	23701509	100	-	.	Parent=FBgn0035437.1.mrna1;Target=FBgn0035437.1 1 992 +
Chr1	stalkie_big_nohaplotig	CDS	23698782	23700462	.	-	1	Parent=FBgn0035437.1.mrna1;Target=FBgn0035437.1 993 2673 +
Chr1	stalkie_big_nohaplotig	CDS	23700518	23701509	.	-	0	Parent=FBgn0035437.1.mrna1;Target=FBgn0035437.1 1 992 +
Chr1	gffcl	locus	23703213	23709733	.	+	.	ID=RLOC_00006549;geneIDs=FBgn0035438.1.path1,comp156662_c0_seq1.path1;transcripts=FBgn0035438.1.mrna1,comp156662_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23703213	23709733	.	+	.	ID=FBgn0035438.1.mrna1;geneID=FBgn0035438.1.path1;Name=FBgn0035438.1;Dir=sensecoverage=100.0;identity=99.8;matches=659;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006549
Chr1	stalkie_big_nohaplotig	exon	23703213	23703362	100	+	.	Parent=FBgn0035438.1.mrna1;Target=FBgn0035438.1 1 150 +
Chr1	stalkie_big_nohaplotig	exon	23707403	23707723	99	+	.	Parent=FBgn0035438.1.mrna1;Target=FBgn0035438.1 151 471 +
Chr1	stalkie_big_nohaplotig	exon	23709545	23709733	100	+	.	Parent=FBgn0035438.1.mrna1;Target=FBgn0035438.1 472 660 +
Chr1	stalkie_big_nohaplotig	CDS	23703213	23703362	.	+	0	Parent=FBgn0035438.1.mrna1;Target=FBgn0035438.1 1 150 +
Chr1	stalkie_big_nohaplotig	CDS	23707403	23707723	.	+	0	Parent=FBgn0035438.1.mrna1;Target=FBgn0035438.1 151 471 +
Chr1	stalkie_big_nohaplotig	CDS	23709545	23709733	.	+	0	Parent=FBgn0035438.1.mrna1;Target=FBgn0035438.1 472 660 +
Chr1	stalkie_big_nohaplotig	mRNA	23707700	23708589	.	+	.	ID=comp156662_c0_seq1.mrna1;geneID=comp156662_c0_seq1.path1;Name=comp156662_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=881;mismatches=8;indels=7;unknowns=0;Target=comp156662_c0_seq1 895 1 .;CDS_Target=comp156662_c0_seq1 93 1 .;locus=RLOC_00006549
Chr1	stalkie_big_nohaplotig	exon	23707700	23708589	98	+	.	Parent=comp156662_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23707700	23707791	.	+	0	Parent=comp156662_c0_seq1.mrna1
Chr1	gffcl	locus	23724382	23742551	.	-	.	ID=RLOC_00006550;geneIDs=FBgn0035949.1.path1;transcripts=FBgn0035949.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23724382	23742551	.	-	.	ID=FBgn0035949.1.mrna1;geneID=FBgn0035949.1.path1;Name=FBgn0035949.1;Dir=sensecoverage=100.0;identity=100.0;matches=465;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006550
Chr1	stalkie_big_nohaplotig	exon	23724382	23724775	100	-	.	Parent=FBgn0035949.1.mrna1;Target=FBgn0035949.1 72 465 +
Chr1	stalkie_big_nohaplotig	exon	23742481	23742551	100	-	.	Parent=FBgn0035949.1.mrna1;Target=FBgn0035949.1 1 71 +
Chr1	stalkie_big_nohaplotig	CDS	23724382	23724775	.	-	1	Parent=FBgn0035949.1.mrna1;Target=FBgn0035949.1 72 465 +
Chr1	stalkie_big_nohaplotig	CDS	23742481	23742551	.	-	0	Parent=FBgn0035949.1.mrna1;Target=FBgn0035949.1 1 71 +
Chr1	gffcl	locus	23757313	23758707	.	-	.	ID=RLOC_00006551;geneIDs=comp149415_c0_seq1.path1;transcripts=comp149415_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23757313	23758707	.	-	.	ID=comp149415_c0_seq1.mrna1;geneID=comp149415_c0_seq1.path1;Name=comp149415_c0_seq1;Dir=sensecoverage=100.0;identity=97.3;matches=505;mismatches=9;indels=5;unknowns=0;Target=comp149415_c0_seq1 3 68 +;locus=RLOC_00006551
Chr1	stalkie_big_nohaplotig	exon	23757313	23757590	98	-	.	Parent=comp149415_c0_seq1.mrna1;Target=comp149415_c0_seq1 237 514 +
Chr1	stalkie_big_nohaplotig	exon	23758467	23758707	95	-	.	Parent=comp149415_c0_seq1.mrna1;Target=comp149415_c0_seq1 1 236 +
Chr1	stalkie_big_nohaplotig	CDS	23758640	23758705	.	-	0	Parent=comp149415_c0_seq1.mrna1
Chr1	gffcl	locus	23762964	23767050	.	+	.	ID=RLOC_00006552;geneIDs=FBgn0035948.1.path1;transcripts=FBgn0035948.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23762964	23767050	.	+	.	ID=FBgn0035948.1.mrna1;geneID=FBgn0035948.1.path1;Name=FBgn0035948.1;Dir=sensecoverage=100.0;identity=99.6;matches=1347;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006552
Chr1	stalkie_big_nohaplotig	exon	23762964	23763183	100	+	.	Parent=FBgn0035948.1.mrna1;Target=FBgn0035948.1 1 220 +
Chr1	stalkie_big_nohaplotig	exon	23765852	23766138	100	+	.	Parent=FBgn0035948.1.mrna1;Target=FBgn0035948.1 221 507 +
Chr1	stalkie_big_nohaplotig	exon	23766205	23767050	99	+	.	Parent=FBgn0035948.1.mrna1;Target=FBgn0035948.1 508 1353 +
Chr1	stalkie_big_nohaplotig	CDS	23762964	23763183	.	+	0	Parent=FBgn0035948.1.mrna1;Target=FBgn0035948.1 1 220 +
Chr1	stalkie_big_nohaplotig	CDS	23765852	23766138	.	+	2	Parent=FBgn0035948.1.mrna1;Target=FBgn0035948.1 221 507 +
Chr1	stalkie_big_nohaplotig	CDS	23766205	23767050	.	+	0	Parent=FBgn0035948.1.mrna1;Target=FBgn0035948.1 508 1353 +
Chr1	gffcl	locus	23768617	23770771	.	-	.	ID=RLOC_00006553;geneIDs=FBgn0035947.1.path1;transcripts=FBgn0035947.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23768617	23770771	.	-	.	ID=FBgn0035947.1.mrna1;geneID=FBgn0035947.1.path1;Name=FBgn0035947.1;Dir=sensecoverage=100.0;identity=99.4;matches=1888;mismatches=11;indels=0;unknowns=0;locus=RLOC_00006553
Chr1	stalkie_big_nohaplotig	exon	23768617	23769312	99	-	.	Parent=FBgn0035947.1.mrna1;Target=FBgn0035947.1 1204 1899 +
Chr1	stalkie_big_nohaplotig	exon	23769368	23770033	99	-	.	Parent=FBgn0035947.1.mrna1;Target=FBgn0035947.1 538 1203 +
Chr1	stalkie_big_nohaplotig	exon	23770093	23770442	99	-	.	Parent=FBgn0035947.1.mrna1;Target=FBgn0035947.1 188 537 +
Chr1	stalkie_big_nohaplotig	exon	23770585	23770771	100	-	.	Parent=FBgn0035947.1.mrna1;Target=FBgn0035947.1 1 187 +
Chr1	stalkie_big_nohaplotig	CDS	23768617	23769312	.	-	0	Parent=FBgn0035947.1.mrna1;Target=FBgn0035947.1 1204 1899 +
Chr1	stalkie_big_nohaplotig	CDS	23769368	23770033	.	-	0	Parent=FBgn0035947.1.mrna1;Target=FBgn0035947.1 538 1203 +
Chr1	stalkie_big_nohaplotig	CDS	23770093	23770442	.	-	2	Parent=FBgn0035947.1.mrna1;Target=FBgn0035947.1 188 537 +
Chr1	stalkie_big_nohaplotig	CDS	23770585	23770771	.	-	0	Parent=FBgn0035947.1.mrna1;Target=FBgn0035947.1 1 187 +
Chr1	gffcl	locus	23773868	23776187	.	+	.	ID=RLOC_00006554;geneIDs=FBgn0086706.1.path1;transcripts=FBgn0086706.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23773868	23776187	.	+	.	ID=FBgn0086706.1.mrna1;geneID=FBgn0086706.1.path1;Name=FBgn0086706.1;Dir=sensecoverage=99.7;identity=99.6;matches=1826;mismatches=7;indels=0;unknowns=0;locus=RLOC_00006554
Chr1	stalkie_big_nohaplotig	exon	23773868	23774083	100	+	.	Parent=FBgn0086706.1.mrna1;Target=FBgn0086706.1 7 222 +
Chr1	stalkie_big_nohaplotig	exon	23774151	23774761	99	+	.	Parent=FBgn0086706.1.mrna1;Target=FBgn0086706.1 223 833 +
Chr1	stalkie_big_nohaplotig	exon	23774823	23775018	100	+	.	Parent=FBgn0086706.1.mrna1;Target=FBgn0086706.1 834 1029 +
Chr1	stalkie_big_nohaplotig	exon	23775071	23775591	99	+	.	Parent=FBgn0086706.1.mrna1;Target=FBgn0086706.1 1030 1550 +
Chr1	stalkie_big_nohaplotig	exon	23775654	23775888	100	+	.	Parent=FBgn0086706.1.mrna1;Target=FBgn0086706.1 1551 1785 +
Chr1	stalkie_big_nohaplotig	exon	23776134	23776187	100	+	.	Parent=FBgn0086706.1.mrna1;Target=FBgn0086706.1 1786 1839 +
Chr1	stalkie_big_nohaplotig	CDS	23773868	23774083	.	+	0	Parent=FBgn0086706.1.mrna1;Target=FBgn0086706.1 7 222 +
Chr1	stalkie_big_nohaplotig	CDS	23774151	23774761	.	+	0	Parent=FBgn0086706.1.mrna1;Target=FBgn0086706.1 223 833 +
Chr1	stalkie_big_nohaplotig	CDS	23774823	23775018	.	+	1	Parent=FBgn0086706.1.mrna1;Target=FBgn0086706.1 834 1029 +
Chr1	stalkie_big_nohaplotig	CDS	23775071	23775591	.	+	0	Parent=FBgn0086706.1.mrna1;Target=FBgn0086706.1 1030 1550 +
Chr1	stalkie_big_nohaplotig	CDS	23775654	23775888	.	+	1	Parent=FBgn0086706.1.mrna1;Target=FBgn0086706.1 1551 1785 +
Chr1	stalkie_big_nohaplotig	CDS	23776134	23776187	.	+	0	Parent=FBgn0086706.1.mrna1;Target=FBgn0086706.1 1786 1839 +
Chr1	gffcl	locus	23774121	23829138	.	-	.	ID=RLOC_00006555;geneIDs=FBgn0004390.1.path1,FBgn0035945.1.path1,comp161501_c0_seq1.path2,comp161530_c0_seq1.path1;transcripts=comp161501_c0_seq1.mrna2,FBgn0035945.1.mrna1,comp161530_c0_seq1.mrna1,FBgn0004390.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23774121	23829138	.	-	.	ID=comp161501_c0_seq1.mrna2;geneID=comp161501_c0_seq1.path2;Name=comp161501_c0_seq1;Dir=antisensecoverage=98.7;identity=98.7;matches=3516;mismatches=14;indels=33;unknowns=0;Target=comp161501_c0_seq1 2847 3263 .;locus=RLOC_00006555
Chr1	stalkie_big_nohaplotig	exon	23774121	23774127	100	-	.	Parent=comp161501_c0_seq1.mrna2;Target=comp161501_c0_seq1 51 57 -
Chr1	stalkie_big_nohaplotig	exon	23776211	23776239	83	-	.	Parent=comp161501_c0_seq1.mrna2;Target=comp161501_c0_seq1 58 87 -
Chr1	stalkie_big_nohaplotig	exon	23779337	23779345	100	-	.	Parent=comp161501_c0_seq1.mrna2;Target=comp161501_c0_seq1 88 96 -
Chr1	stalkie_big_nohaplotig	exon	23782191	23782197	100	-	.	Parent=comp161501_c0_seq1.mrna2;Target=comp161501_c0_seq1 97 103 -
Chr1	stalkie_big_nohaplotig	exon	23785070	23785082	46	-	.	Parent=comp161501_c0_seq1.mrna2;Target=comp161501_c0_seq1 108 133 -
Chr1	stalkie_big_nohaplotig	exon	23787471	23787479	100	-	.	Parent=comp161501_c0_seq1.mrna2;Target=comp161501_c0_seq1 148 156 -
Chr1	stalkie_big_nohaplotig	exon	23787487	23787497	100	-	.	Parent=comp161501_c0_seq1.mrna2;Target=comp161501_c0_seq1 217 227 -
Chr1	stalkie_big_nohaplotig	exon	23788291	23788312	45	-	.	Parent=comp161501_c0_seq1.mrna2;Target=comp161501_c0_seq1 460 496 -
Chr1	stalkie_big_nohaplotig	exon	23790649	23790657	100	-	.	Parent=comp161501_c0_seq1.mrna2;Target=comp161501_c0_seq1 498 506 -
Chr1	stalkie_big_nohaplotig	exon	23791082	23791674	99	-	.	Parent=comp161501_c0_seq1.mrna2;Target=comp161501_c0_seq1 656 1248 -
Chr1	stalkie_big_nohaplotig	exon	23799526	23799733	100	-	.	Parent=comp161501_c0_seq1.mrna2;Target=comp161501_c0_seq1 1249 1456 -
Chr1	stalkie_big_nohaplotig	exon	23800119	23800393	100	-	.	Parent=comp161501_c0_seq1.mrna2;Target=comp161501_c0_seq1 1457 1731 -
Chr1	stalkie_big_nohaplotig	exon	23800462	23802248	99	-	.	Parent=comp161501_c0_seq1.mrna2;Target=comp161501_c0_seq1 1732 3518 -
Chr1	stalkie_big_nohaplotig	exon	23828585	23829138	99	-	.	Parent=comp161501_c0_seq1.mrna2;Target=comp161501_c0_seq1 3519 4068 -
Chr1	stalkie_big_nohaplotig	CDS	23801577	23801993	.	-	2	Parent=comp161501_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	23777355	23781615	.	-	.	ID=FBgn0035945.1.mrna1;geneID=FBgn0035945.1.path1;Name=FBgn0035945.1;Dir=sensecoverage=100.0;identity=99.9;matches=1720;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006555
Chr1	stalkie_big_nohaplotig	exon	23777355	23777423	100	-	.	Parent=FBgn0035945.1.mrna1;Target=FBgn0035945.1 1654 1722 +
Chr1	stalkie_big_nohaplotig	exon	23777504	23777601	100	-	.	Parent=FBgn0035945.1.mrna1;Target=FBgn0035945.1 1556 1653 +
Chr1	stalkie_big_nohaplotig	exon	23777662	23778074	99	-	.	Parent=FBgn0035945.1.mrna1;Target=FBgn0035945.1 1143 1555 +
Chr1	stalkie_big_nohaplotig	exon	23779286	23779514	100	-	.	Parent=FBgn0035945.1.mrna1;Target=FBgn0035945.1 914 1142 +
Chr1	stalkie_big_nohaplotig	exon	23779626	23779872	100	-	.	Parent=FBgn0035945.1.mrna1;Target=FBgn0035945.1 667 913 +
Chr1	stalkie_big_nohaplotig	exon	23780797	23781034	100	-	.	Parent=FBgn0035945.1.mrna1;Target=FBgn0035945.1 429 666 +
Chr1	stalkie_big_nohaplotig	exon	23781120	23781370	100	-	.	Parent=FBgn0035945.1.mrna1;Target=FBgn0035945.1 178 428 +
Chr1	stalkie_big_nohaplotig	exon	23781439	23781615	99	-	.	Parent=FBgn0035945.1.mrna1;Target=FBgn0035945.1 1 177 +
Chr1	stalkie_big_nohaplotig	CDS	23777355	23777423	.	-	0	Parent=FBgn0035945.1.mrna1;Target=FBgn0035945.1 1654 1722 +
Chr1	stalkie_big_nohaplotig	CDS	23777504	23777601	.	-	2	Parent=FBgn0035945.1.mrna1;Target=FBgn0035945.1 1556 1653 +
Chr1	stalkie_big_nohaplotig	CDS	23777662	23778074	.	-	1	Parent=FBgn0035945.1.mrna1;Target=FBgn0035945.1 1143 1555 +
Chr1	stalkie_big_nohaplotig	CDS	23779286	23779514	.	-	2	Parent=FBgn0035945.1.mrna1;Target=FBgn0035945.1 914 1142 +
Chr1	stalkie_big_nohaplotig	CDS	23779626	23779872	.	-	0	Parent=FBgn0035945.1.mrna1;Target=FBgn0035945.1 667 913 +
Chr1	stalkie_big_nohaplotig	CDS	23780797	23781034	.	-	1	Parent=FBgn0035945.1.mrna1;Target=FBgn0035945.1 429 666 +
Chr1	stalkie_big_nohaplotig	CDS	23781120	23781370	.	-	0	Parent=FBgn0035945.1.mrna1;Target=FBgn0035945.1 178 428 +
Chr1	stalkie_big_nohaplotig	CDS	23781439	23781615	.	-	0	Parent=FBgn0035945.1.mrna1;Target=FBgn0035945.1 1 177 +
Chr1	stalkie_big_nohaplotig	mRNA	23786589	23787937	.	-	.	ID=comp161530_c0_seq1.mrna1;geneID=comp161530_c0_seq1.path1;Name=comp161530_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.7;matches=1291;mismatches=54;indels=79;unknowns=0;Target=comp161530_c0_seq1 1420 1 .;CDS_Target=comp161530_c0_seq1 570 451 .;locus=RLOC_00006555
Chr1	stalkie_big_nohaplotig	exon	23786589	23787937	90	-	.	Parent=comp161530_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23787418	23787537	.	-	0	Parent=comp161530_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23791054	23802248	.	-	.	ID=FBgn0004390.1.mrna1;geneID=FBgn0004390.1.path1;Name=FBgn0004390.1;Dir=sensecoverage=94.2;identity=99.9;matches=2888;mismatches=3;indels=0;unknowns=0;locus=RLOC_00006555
Chr1	stalkie_big_nohaplotig	exon	23791054	23791674	99	-	.	Parent=FBgn0004390.1.mrna1;Target=FBgn0004390.1 2449 3069 +
Chr1	stalkie_big_nohaplotig	exon	23799526	23799733	100	-	.	Parent=FBgn0004390.1.mrna1;Target=FBgn0004390.1 2241 2448 +
Chr1	stalkie_big_nohaplotig	exon	23800119	23800393	100	-	.	Parent=FBgn0004390.1.mrna1;Target=FBgn0004390.1 1966 2240 +
Chr1	stalkie_big_nohaplotig	exon	23800462	23802248	99	-	.	Parent=FBgn0004390.1.mrna1;Target=FBgn0004390.1 179 1965 +
Chr1	stalkie_big_nohaplotig	CDS	23791054	23791674	.	-	0	Parent=FBgn0004390.1.mrna1;Target=FBgn0004390.1 2449 3069 +
Chr1	stalkie_big_nohaplotig	CDS	23799526	23799733	.	-	1	Parent=FBgn0004390.1.mrna1;Target=FBgn0004390.1 2241 2448 +
Chr1	stalkie_big_nohaplotig	CDS	23800119	23800393	.	-	0	Parent=FBgn0004390.1.mrna1;Target=FBgn0004390.1 1966 2240 +
Chr1	stalkie_big_nohaplotig	CDS	23800462	23802246	.	-	0	Parent=FBgn0004390.1.mrna1;Target=FBgn0004390.1 181 1965 +
Chr1	gffcl	locus	23789656	23790013	.	+	.	ID=RLOC_00006556;geneIDs=comp150752_c0_seq1.path1;transcripts=comp150752_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23789656	23790013	.	+	.	ID=comp150752_c0_seq1.mrna1;geneID=comp150752_c0_seq1.path1;Name=comp150752_c0_seq1;Dir=indeterminatecoverage=99.4;identity=98.6;matches=353;mismatches=5;indels=0;unknowns=0;Target=comp150752_c0_seq1 360 3 .;CDS_Target=comp150752_c0_seq1 232 131 .;locus=RLOC_00006556
Chr1	stalkie_big_nohaplotig	exon	23789656	23790013	98	+	.	Parent=comp150752_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23789784	23789885	.	+	0	Parent=comp150752_c0_seq1.mrna1
Chr1	gffcl	locus	23830914	23913919	.	-	.	ID=RLOC_00006557;geneIDs=FBgn0024150.1.path1,comp162994_c0_seq1.path1;transcripts=FBgn0024150.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23831006	23913919	.	-	.	ID=FBgn0024150.1.mrna1;geneID=FBgn0024150.1.path1;Name=FBgn0024150.1;Dir=sensecoverage=100.0;identity=99.4;matches=5052;mismatches=21;indels=7;unknowns=0;locus=RLOC_00006557
Chr1	stalkie_big_nohaplotig	exon	23831006	23831116	99	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 4966 5076 +
Chr1	stalkie_big_nohaplotig	exon	23831185	23831327	99	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 4823 4965 +
Chr1	stalkie_big_nohaplotig	exon	23831398	23831626	99	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 4594 4822 +
Chr1	stalkie_big_nohaplotig	exon	23832617	23833020	100	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 4190 4593 +
Chr1	stalkie_big_nohaplotig	exon	23833096	23833276	99	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 4009 4189 +
Chr1	stalkie_big_nohaplotig	exon	23833347	23833442	100	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 3913 4008 +
Chr1	stalkie_big_nohaplotig	exon	23835962	23836797	99	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 3077 3912 +
Chr1	stalkie_big_nohaplotig	exon	23836886	23837040	99	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 2922 3076 +
Chr1	stalkie_big_nohaplotig	exon	23837169	23837308	100	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 2782 2921 +
Chr1	stalkie_big_nohaplotig	exon	23839210	23839305	100	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 2686 2781 +
Chr1	stalkie_big_nohaplotig	exon	23839578	23839998	99	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 2265 2685 +
Chr1	stalkie_big_nohaplotig	exon	23840275	23840415	100	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 2124 2264 +
Chr1	stalkie_big_nohaplotig	exon	23843314	23843450	100	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 1987 2123 +
Chr1	stalkie_big_nohaplotig	exon	23844415	23844576	100	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 1825 1986 +
Chr1	stalkie_big_nohaplotig	exon	23847148	23847238	81	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 1735 1824 +
Chr1	stalkie_big_nohaplotig	exon	23850435	23850568	100	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 1601 1734 +
Chr1	stalkie_big_nohaplotig	exon	23850809	23851001	98	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 1408 1600 +
Chr1	stalkie_big_nohaplotig	exon	23851214	23851395	100	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 1226 1407 +
Chr1	stalkie_big_nohaplotig	exon	23853944	23854091	100	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 1078 1225 +
Chr1	stalkie_big_nohaplotig	exon	23854365	23854636	100	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 806 1077 +
Chr1	stalkie_big_nohaplotig	exon	23854718	23855000	100	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 523 805 +
Chr1	stalkie_big_nohaplotig	exon	23857277	23857736	100	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 63 522 +
Chr1	stalkie_big_nohaplotig	exon	23913858	23913919	100	-	.	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 1 62 +
Chr1	stalkie_big_nohaplotig	CDS	23831006	23831116	.	-	0	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 4966 5076 +
Chr1	stalkie_big_nohaplotig	CDS	23831185	23831327	.	-	2	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 4823 4965 +
Chr1	stalkie_big_nohaplotig	CDS	23831398	23831626	.	-	0	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 4594 4822 +
Chr1	stalkie_big_nohaplotig	CDS	23832617	23833020	.	-	2	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 4190 4593 +
Chr1	stalkie_big_nohaplotig	CDS	23833096	23833276	.	-	0	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 4009 4189 +
Chr1	stalkie_big_nohaplotig	CDS	23833347	23833442	.	-	0	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 3913 4008 +
Chr1	stalkie_big_nohaplotig	CDS	23835962	23836797	.	-	2	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 3077 3912 +
Chr1	stalkie_big_nohaplotig	CDS	23836886	23837040	.	-	1	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 2922 3076 +
Chr1	stalkie_big_nohaplotig	CDS	23837169	23837308	.	-	0	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 2782 2921 +
Chr1	stalkie_big_nohaplotig	CDS	23839210	23839305	.	-	0	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 2686 2781 +
Chr1	stalkie_big_nohaplotig	CDS	23839578	23839998	.	-	1	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 2265 2685 +
Chr1	stalkie_big_nohaplotig	CDS	23840275	23840415	.	-	1	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 2124 2264 +
Chr1	stalkie_big_nohaplotig	CDS	23843314	23843450	.	-	0	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 1987 2123 +
Chr1	stalkie_big_nohaplotig	CDS	23844415	23844453	.	-	0	Parent=FBgn0024150.1.mrna1;Target=FBgn0024150.1 1948 1986 +
Chr1	gffcl	locus	23875442	23882876	.	-	.	ID=RLOC_00006558;geneIDs=FBgn0052475.1.path1;transcripts=FBgn0052475.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23875442	23882876	.	-	.	ID=FBgn0052475.1.mrna1;geneID=FBgn0052475.1.path1;Name=FBgn0052475.1;Dir=sensecoverage=100.0;identity=98.5;matches=1668;mismatches=10;indels=16;unknowns=2;locus=RLOC_00006558
Chr1	stalkie_big_nohaplotig	exon	23875442	23875496	100	-	.	Parent=FBgn0052475.1.mrna1;Target=FBgn0052475.1 1626 1680 +
Chr1	stalkie_big_nohaplotig	exon	23875565	23875777	98	-	.	Parent=FBgn0052475.1.mrna1;Target=FBgn0052475.1 1413 1625 +
Chr1	stalkie_big_nohaplotig	exon	23875854	23876004	98	-	.	Parent=FBgn0052475.1.mrna1;Target=FBgn0052475.1 1262 1412 +
Chr1	stalkie_big_nohaplotig	exon	23876094	23876312	100	-	.	Parent=FBgn0052475.1.mrna1;Target=FBgn0052475.1 1043 1261 +
Chr1	stalkie_big_nohaplotig	exon	23876370	23876561	98	-	.	Parent=FBgn0052475.1.mrna1;Target=FBgn0052475.1 851 1042 +
Chr1	stalkie_big_nohaplotig	exon	23877901	23878057	99	-	.	Parent=FBgn0052475.1.mrna1;Target=FBgn0052475.1 694 850 +
Chr1	stalkie_big_nohaplotig	exon	23882168	23882876	97	-	.	Parent=FBgn0052475.1.mrna1;Target=FBgn0052475.1 1 693 +
Chr1	stalkie_big_nohaplotig	CDS	23875442	23875496	.	-	1	Parent=FBgn0052475.1.mrna1;Target=FBgn0052475.1 1626 1680 +
Chr1	stalkie_big_nohaplotig	CDS	23875565	23875777	.	-	1	Parent=FBgn0052475.1.mrna1;Target=FBgn0052475.1 1413 1625 +
Chr1	stalkie_big_nohaplotig	CDS	23875854	23876004	.	-	2	Parent=FBgn0052475.1.mrna1;Target=FBgn0052475.1 1262 1412 +
Chr1	stalkie_big_nohaplotig	CDS	23876094	23876312	.	-	2	Parent=FBgn0052475.1.mrna1;Target=FBgn0052475.1 1043 1261 +
Chr1	stalkie_big_nohaplotig	CDS	23876370	23876561	.	-	2	Parent=FBgn0052475.1.mrna1;Target=FBgn0052475.1 851 1042 +
Chr1	stalkie_big_nohaplotig	CDS	23877901	23878057	.	-	0	Parent=FBgn0052475.1.mrna1;Target=FBgn0052475.1 694 850 +
Chr1	stalkie_big_nohaplotig	CDS	23882168	23882788	.	-	0	Parent=FBgn0052475.1.mrna1;Target=FBgn0052475.1 82 693 +
Chr1	gffcl	locus	23883220	23883645	.	-	.	ID=RLOC_00006559;geneIDs=comp492338_c0_seq1.path1;transcripts=comp492338_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23883220	23883645	.	-	.	ID=comp492338_c0_seq1.mrna1;geneID=comp492338_c0_seq1.path1;Name=comp492338_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.4;matches=408;mismatches=1;indels=23;unknowns=0;Target=comp492338_c0_seq1 415 1 .;CDS_Target=comp492338_c0_seq1 115 2 .;locus=RLOC_00006559
Chr1	stalkie_big_nohaplotig	exon	23883220	23883645	94	-	.	Parent=comp492338_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23883520	23883644	.	-	0	Parent=comp492338_c0_seq1.mrna1
Chr1	gffcl	locus	23890835	24075149	.	.	.	ID=RLOC_00006560;geneIDs=FBgn0021760.1.path1,FBgn0035132.2.path2,comp160577_c0_seq1.path1,comp377343_c0_seq1.path1;transcripts=comp160577_c0_seq1.mrna1,FBgn0035132.2.mrna2,FBgn0021760.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23891029	24075149	.	-	.	ID=comp160577_c0_seq1.mrna1;geneID=comp160577_c0_seq1.path1;Name=comp160577_c0_seq1;Dir=sensecoverage=92.2;identity=95.7;matches=2600;mismatches=63;indels=53;unknowns=0;locus=RLOC_00006560
Chr1	stalkie_big_nohaplotig	exon	23891029	23891614	99	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 2373 2958 +
Chr1	stalkie_big_nohaplotig	exon	23893673	23894045	99	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 2000 2372 +
Chr1	stalkie_big_nohaplotig	exon	23897622	23897816	100	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 1805 1999 +
Chr1	stalkie_big_nohaplotig	exon	23897879	23898050	98	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 1633 1804 +
Chr1	stalkie_big_nohaplotig	exon	23899233	23899484	98	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 1381 1632 +
Chr1	stalkie_big_nohaplotig	exon	23899556	23899744	98	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 1192 1380 +
Chr1	stalkie_big_nohaplotig	exon	23899847	23900009	99	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 1029 1191 +
Chr1	stalkie_big_nohaplotig	exon	23900083	23900625	99	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 486 1028 +
Chr1	stalkie_big_nohaplotig	exon	23915164	23915170	85	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 479 485 +
Chr1	stalkie_big_nohaplotig	exon	23917280	23917287	100	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 471 478 +
Chr1	stalkie_big_nohaplotig	exon	23929272	23929273	100	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 469 470 +
Chr1	stalkie_big_nohaplotig	exon	23932728	23932729	50	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 467 468 +
Chr1	stalkie_big_nohaplotig	exon	23949014	23949022	100	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 458 466 +
Chr1	stalkie_big_nohaplotig	exon	23954912	23954929	38	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 440 457 +
Chr1	stalkie_big_nohaplotig	exon	23955838	23955863	76	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 416 439 +
Chr1	stalkie_big_nohaplotig	exon	23960657	23960658	100	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 352 353 +
Chr1	stalkie_big_nohaplotig	exon	23966014	23966123	32	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 285 351 +
Chr1	stalkie_big_nohaplotig	exon	23972679	23972686	100	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 277 284 +
Chr1	stalkie_big_nohaplotig	exon	24001742	24001744	100	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 274 276 +
Chr1	stalkie_big_nohaplotig	exon	24008744	24008748	100	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 269 273 +
Chr1	stalkie_big_nohaplotig	exon	24022888	24022890	100	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 266 268 +
Chr1	stalkie_big_nohaplotig	exon	24039178	24039184	100	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 259 265 +
Chr1	stalkie_big_nohaplotig	exon	24046366	24046372	100	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 252 258 +
Chr1	stalkie_big_nohaplotig	exon	24060560	24060565	100	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 246 251 +
Chr1	stalkie_big_nohaplotig	exon	24063146	24063149	100	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 242 245 +
Chr1	stalkie_big_nohaplotig	exon	24070835	24070836	100	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 240 241 +
Chr1	stalkie_big_nohaplotig	exon	24075141	24075149	100	-	.	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 231 239 +
Chr1	stalkie_big_nohaplotig	CDS	23893955	23894045	.	-	1	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 2000 2090 +
Chr1	stalkie_big_nohaplotig	CDS	23897622	23897816	.	-	1	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 1805 1999 +
Chr1	stalkie_big_nohaplotig	CDS	23897879	23898050	.	-	2	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 1633 1804 +
Chr1	stalkie_big_nohaplotig	CDS	23899233	23899484	.	-	2	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 1381 1632 +
Chr1	stalkie_big_nohaplotig	CDS	23899556	23899744	.	-	2	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 1192 1380 +
Chr1	stalkie_big_nohaplotig	CDS	23899847	23900009	.	-	0	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 1029 1191 +
Chr1	stalkie_big_nohaplotig	CDS	23900083	23900625	.	-	0	Parent=comp160577_c0_seq1.mrna1;Target=comp160577_c0_seq1 486 1028 +
Chr1	stalkie_big_nohaplotig	mRNA	23891482	23900639	.	-	.	ID=FBgn0035132.2.mrna2;geneID=FBgn0035132.2.path2;Name=FBgn0035132.2;Dir=sensecoverage=97.3;identity=99.1;matches=1646;mismatches=15;indels=0;unknowns=0;locus=RLOC_00006560
Chr1	stalkie_big_nohaplotig	exon	23891482	23891614	100	-	.	Parent=FBgn0035132.2.mrna2;Target=FBgn0035132.2 1575 1707 +
Chr1	stalkie_big_nohaplotig	exon	23897622	23897816	100	-	.	Parent=FBgn0035132.2.mrna2;Target=FBgn0035132.2 1380 1574 +
Chr1	stalkie_big_nohaplotig	exon	23897879	23898050	98	-	.	Parent=FBgn0035132.2.mrna2;Target=FBgn0035132.2 1208 1379 +
Chr1	stalkie_big_nohaplotig	exon	23899233	23899484	98	-	.	Parent=FBgn0035132.2.mrna2;Target=FBgn0035132.2 956 1207 +
Chr1	stalkie_big_nohaplotig	exon	23899556	23899744	98	-	.	Parent=FBgn0035132.2.mrna2;Target=FBgn0035132.2 767 955 +
Chr1	stalkie_big_nohaplotig	exon	23899847	23900009	99	-	.	Parent=FBgn0035132.2.mrna2;Target=FBgn0035132.2 604 766 +
Chr1	stalkie_big_nohaplotig	exon	23900083	23900639	98	-	.	Parent=FBgn0035132.2.mrna2;Target=FBgn0035132.2 47 603 +
Chr1	stalkie_big_nohaplotig	CDS	23891482	23891614	.	-	0	Parent=FBgn0035132.2.mrna2;Target=FBgn0035132.2 1575 1707 +
Chr1	stalkie_big_nohaplotig	CDS	23897622	23897816	.	-	0	Parent=FBgn0035132.2.mrna2;Target=FBgn0035132.2 1380 1574 +
Chr1	stalkie_big_nohaplotig	CDS	23897879	23898050	.	-	1	Parent=FBgn0035132.2.mrna2;Target=FBgn0035132.2 1208 1379 +
Chr1	stalkie_big_nohaplotig	CDS	23899233	23899484	.	-	1	Parent=FBgn0035132.2.mrna2;Target=FBgn0035132.2 956 1207 +
Chr1	stalkie_big_nohaplotig	CDS	23899556	23899744	.	-	1	Parent=FBgn0035132.2.mrna2;Target=FBgn0035132.2 767 955 +
Chr1	stalkie_big_nohaplotig	CDS	23899847	23900009	.	-	2	Parent=FBgn0035132.2.mrna2;Target=FBgn0035132.2 604 766 +
Chr1	stalkie_big_nohaplotig	CDS	23900083	23900639	.	-	1	Parent=FBgn0035132.2.mrna2;Target=FBgn0035132.2 47 603 +
Chr1	stalkie_big_nohaplotig	mRNA	24059817	24064247	.	-	.	ID=FBgn0021760.1.mrna1;geneID=FBgn0021760.1.path1;Name=FBgn0021760.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=4409;mismatches=22;indels=0;unknowns=0;Target=FBgn0021760.1 4431 1 .;locus=RLOC_00006560
Chr1	stalkie_big_nohaplotig	exon	24059817	24064247	99	-	.	Parent=FBgn0021760.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	24059817	24064247	.	-	0	Parent=FBgn0021760.1.mrna1
Chr1	gffcl	locus	23894517	23896337	.	+	.	ID=RLOC_00006561;geneIDs=comp161456_c1_seq1.path1;transcripts=comp161456_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	23894517	23896337	.	+	.	ID=comp161456_c1_seq1.mrna1;geneID=comp161456_c1_seq1.path1;Name=comp161456_c1_seq1;Dir=indeterminatecoverage=100.0;identity=94.7;matches=1732;mismatches=51;indels=46;unknowns=0;Target=comp161456_c1_seq1 1791 1 .;CDS_Target=comp161456_c1_seq1 364 251 .;locus=RLOC_00006561
Chr1	stalkie_big_nohaplotig	exon	23894517	23896337	94	+	.	Parent=comp161456_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	23894764	23894911	.	+	0	Parent=comp161456_c1_seq1.mrna1
Chr1	gffcl	locus	24014023	24014258	.	-	.	ID=RLOC_00006562;geneIDs=comp137808_c0_seq1.path1;transcripts=comp137808_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24014023	24014258	.	-	.	ID=comp137808_c0_seq1.mrna1;geneID=comp137808_c0_seq1.path1;Name=comp137808_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=236;mismatches=0;indels=0;unknowns=0;Target=comp137808_c0_seq1 236 1 .;CDS_Target=comp137808_c0_seq1 131 33 .;locus=RLOC_00006562
Chr1	stalkie_big_nohaplotig	exon	24014023	24014258	100	-	.	Parent=comp137808_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	24014128	24014226	.	-	0	Parent=comp137808_c0_seq1.mrna1
Chr1	gffcl	locus	24037667	24045082	.	+	.	ID=RLOC_00006563;geneIDs=FBgn0026592.1.path1;transcripts=FBgn0026592.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24037667	24045082	.	+	.	ID=FBgn0026592.1.mrna1;geneID=FBgn0026592.1.path1;Name=FBgn0026592.1;Dir=sensecoverage=100.0;identity=99.3;matches=733;mismatches=5;indels=0;unknowns=0;locus=RLOC_00006563
Chr1	stalkie_big_nohaplotig	exon	24037667	24037804	100	+	.	Parent=FBgn0026592.1.mrna1;Target=FBgn0026592.1 1 138 +
Chr1	stalkie_big_nohaplotig	exon	24043017	24043398	99	+	.	Parent=FBgn0026592.1.mrna1;Target=FBgn0026592.1 139 520 +
Chr1	stalkie_big_nohaplotig	exon	24043487	24043623	97	+	.	Parent=FBgn0026592.1.mrna1;Target=FBgn0026592.1 521 657 +
Chr1	stalkie_big_nohaplotig	exon	24045002	24045082	100	+	.	Parent=FBgn0026592.1.mrna1;Target=FBgn0026592.1 658 738 +
Chr1	stalkie_big_nohaplotig	CDS	24037667	24037804	.	+	0	Parent=FBgn0026592.1.mrna1;Target=FBgn0026592.1 1 138 +
Chr1	stalkie_big_nohaplotig	CDS	24043017	24043398	.	+	0	Parent=FBgn0026592.1.mrna1;Target=FBgn0026592.1 139 520 +
Chr1	stalkie_big_nohaplotig	CDS	24043487	24043623	.	+	2	Parent=FBgn0026592.1.mrna1;Target=FBgn0026592.1 521 657 +
Chr1	stalkie_big_nohaplotig	CDS	24045002	24045082	.	+	0	Parent=FBgn0026592.1.mrna1;Target=FBgn0026592.1 658 738 +
Chr1	gffcl	locus	24048368	24052255	.	-	.	ID=RLOC_00006564;geneIDs=FBgn0035468.1.path1;transcripts=FBgn0035468.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24048368	24052255	.	-	.	ID=FBgn0035468.1.mrna1;geneID=FBgn0035468.1.path1;Name=FBgn0035468.1;Dir=sensecoverage=100.0;identity=99.1;matches=1466;mismatches=13;indels=0;unknowns=0;locus=RLOC_00006564
Chr1	stalkie_big_nohaplotig	exon	24048368	24048571	99	-	.	Parent=FBgn0035468.1.mrna1;Target=FBgn0035468.1 1276 1479 +
Chr1	stalkie_big_nohaplotig	exon	24048712	24049152	99	-	.	Parent=FBgn0035468.1.mrna1;Target=FBgn0035468.1 835 1275 +
Chr1	stalkie_big_nohaplotig	exon	24049210	24049323	100	-	.	Parent=FBgn0035468.1.mrna1;Target=FBgn0035468.1 721 834 +
Chr1	stalkie_big_nohaplotig	exon	24049388	24049531	98	-	.	Parent=FBgn0035468.1.mrna1;Target=FBgn0035468.1 577 720 +
Chr1	stalkie_big_nohaplotig	exon	24051024	24051206	98	-	.	Parent=FBgn0035468.1.mrna1;Target=FBgn0035468.1 394 576 +
Chr1	stalkie_big_nohaplotig	exon	24051264	24051413	99	-	.	Parent=FBgn0035468.1.mrna1;Target=FBgn0035468.1 244 393 +
Chr1	stalkie_big_nohaplotig	exon	24052013	24052255	98	-	.	Parent=FBgn0035468.1.mrna1;Target=FBgn0035468.1 1 243 +
Chr1	stalkie_big_nohaplotig	CDS	24048368	24048571	.	-	0	Parent=FBgn0035468.1.mrna1;Target=FBgn0035468.1 1276 1479 +
Chr1	stalkie_big_nohaplotig	CDS	24048712	24049152	.	-	0	Parent=FBgn0035468.1.mrna1;Target=FBgn0035468.1 835 1275 +
Chr1	stalkie_big_nohaplotig	CDS	24049210	24049323	.	-	0	Parent=FBgn0035468.1.mrna1;Target=FBgn0035468.1 721 834 +
Chr1	stalkie_big_nohaplotig	CDS	24049388	24049531	.	-	0	Parent=FBgn0035468.1.mrna1;Target=FBgn0035468.1 577 720 +
Chr1	stalkie_big_nohaplotig	CDS	24051024	24051206	.	-	0	Parent=FBgn0035468.1.mrna1;Target=FBgn0035468.1 394 576 +
Chr1	stalkie_big_nohaplotig	CDS	24051264	24051413	.	-	0	Parent=FBgn0035468.1.mrna1;Target=FBgn0035468.1 244 393 +
Chr1	stalkie_big_nohaplotig	CDS	24052013	24052255	.	-	0	Parent=FBgn0035468.1.mrna1;Target=FBgn0035468.1 1 243 +
Chr1	gffcl	locus	24054246	24055693	.	+	.	ID=RLOC_00006565;geneIDs=FBgn0011573.1.path1;transcripts=FBgn0011573.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24054246	24055693	.	+	.	ID=FBgn0011573.1.mrna1;geneID=FBgn0011573.1.path1;Name=FBgn0011573.1;Dir=sensecoverage=100.0;identity=99.5;matches=1185;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006565
Chr1	stalkie_big_nohaplotig	exon	24054246	24054296	100	+	.	Parent=FBgn0011573.1.mrna1;Target=FBgn0011573.1 1 51 +
Chr1	stalkie_big_nohaplotig	exon	24054353	24054556	99	+	.	Parent=FBgn0011573.1.mrna1;Target=FBgn0011573.1 52 255 +
Chr1	stalkie_big_nohaplotig	exon	24054629	24055288	99	+	.	Parent=FBgn0011573.1.mrna1;Target=FBgn0011573.1 256 915 +
Chr1	stalkie_big_nohaplotig	exon	24055418	24055693	99	+	.	Parent=FBgn0011573.1.mrna1;Target=FBgn0011573.1 916 1191 +
Chr1	stalkie_big_nohaplotig	CDS	24054246	24054296	.	+	0	Parent=FBgn0011573.1.mrna1;Target=FBgn0011573.1 1 51 +
Chr1	stalkie_big_nohaplotig	CDS	24054353	24054556	.	+	0	Parent=FBgn0011573.1.mrna1;Target=FBgn0011573.1 52 255 +
Chr1	stalkie_big_nohaplotig	CDS	24054629	24055288	.	+	0	Parent=FBgn0011573.1.mrna1;Target=FBgn0011573.1 256 915 +
Chr1	stalkie_big_nohaplotig	CDS	24055418	24055693	.	+	0	Parent=FBgn0011573.1.mrna1;Target=FBgn0011573.1 916 1191 +
Chr1	gffcl	locus	24073439	24075118	.	-	.	ID=RLOC_00006566;geneIDs=FBgn0041607.1.path1;transcripts=FBgn0041607.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24073439	24075118	.	-	.	ID=FBgn0041607.1.mrna1;geneID=FBgn0041607.1.path1;Name=FBgn0041607.1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1663;mismatches=17;indels=0;unknowns=0;Target=FBgn0041607.1 1680 1 .;locus=RLOC_00006566
Chr1	stalkie_big_nohaplotig	exon	24073439	24075118	98	-	.	Parent=FBgn0041607.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	24073439	24075118	.	-	0	Parent=FBgn0041607.1.mrna1
Chr1	gffcl	locus	24111190	24174059	.	-	.	ID=RLOC_00006567;geneIDs=FBgn0013751.1.path1;transcripts=FBgn0013751.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24111190	24174059	.	-	.	ID=FBgn0013751.1.mrna1;geneID=FBgn0013751.1.path1;Name=FBgn0013751.1;Dir=sensecoverage=100.0;identity=99.8;matches=973;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006567
Chr1	stalkie_big_nohaplotig	exon	24111190	24111248	98	-	.	Parent=FBgn0013751.1.mrna1;Target=FBgn0013751.1 917 975 +
Chr1	stalkie_big_nohaplotig	exon	24112727	24112852	100	-	.	Parent=FBgn0013751.1.mrna1;Target=FBgn0013751.1 791 916 +
Chr1	stalkie_big_nohaplotig	exon	24113413	24113646	100	-	.	Parent=FBgn0013751.1.mrna1;Target=FBgn0013751.1 557 790 +
Chr1	stalkie_big_nohaplotig	exon	24118187	24118404	99	-	.	Parent=FBgn0013751.1.mrna1;Target=FBgn0013751.1 339 556 +
Chr1	stalkie_big_nohaplotig	exon	24125332	24125513	100	-	.	Parent=FBgn0013751.1.mrna1;Target=FBgn0013751.1 157 338 +
Chr1	stalkie_big_nohaplotig	exon	24173904	24174059	100	-	.	Parent=FBgn0013751.1.mrna1;Target=FBgn0013751.1 1 156 +
Chr1	stalkie_big_nohaplotig	CDS	24111190	24111248	.	-	2	Parent=FBgn0013751.1.mrna1;Target=FBgn0013751.1 917 975 +
Chr1	stalkie_big_nohaplotig	CDS	24112727	24112852	.	-	2	Parent=FBgn0013751.1.mrna1;Target=FBgn0013751.1 791 916 +
Chr1	stalkie_big_nohaplotig	CDS	24113413	24113646	.	-	2	Parent=FBgn0013751.1.mrna1;Target=FBgn0013751.1 557 790 +
Chr1	stalkie_big_nohaplotig	CDS	24118187	24118404	.	-	1	Parent=FBgn0013751.1.mrna1;Target=FBgn0013751.1 339 556 +
Chr1	stalkie_big_nohaplotig	CDS	24125332	24125513	.	-	0	Parent=FBgn0013751.1.mrna1;Target=FBgn0013751.1 157 338 +
Chr1	stalkie_big_nohaplotig	CDS	24173904	24174059	.	-	0	Parent=FBgn0013751.1.mrna1;Target=FBgn0013751.1 1 156 +
Chr1	gffcl	locus	24174221	24174587	.	+	.	ID=RLOC_00006568;geneIDs=comp74024_c0_seq1.path1;transcripts=comp74024_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24174221	24174587	.	+	.	ID=comp74024_c0_seq1.mrna1;geneID=comp74024_c0_seq1.path1;Name=comp74024_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=367;mismatches=0;indels=0;unknowns=0;Target=comp74024_c0_seq1 367 1 .;CDS_Target=comp74024_c0_seq1 173 3 .;locus=RLOC_00006568
Chr1	stalkie_big_nohaplotig	exon	24174221	24174587	100	+	.	Parent=comp74024_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	24174223	24174393	.	+	0	Parent=comp74024_c0_seq1.mrna1
Chr1	gffcl	locus	24263458	24338664	.	-	.	ID=RLOC_00006570;geneIDs=FBgn0004875.1.path1,comp134989_c0_seq1.path1,comp143599_c0_seq1.path1,comp161788_c0_seq1.path1;transcripts=comp161788_c0_seq1.mrna1,comp143599_c0_seq1.mrna1,FBgn0004875.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24263458	24338224	.	-	.	ID=comp161788_c0_seq1.mrna1;geneID=comp161788_c0_seq1.path1;Name=comp161788_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=6553;mismatches=7;indels=3;unknowns=0;locus=RLOC_00006570
Chr1	stalkie_big_nohaplotig	exon	24263458	24263691	99	-	.	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 1 234 -
Chr1	stalkie_big_nohaplotig	exon	24270076	24270273	100	-	.	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 235 432 -
Chr1	stalkie_big_nohaplotig	exon	24270334	24270439	100	-	.	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 433 538 -
Chr1	stalkie_big_nohaplotig	exon	24270503	24272310	100	-	.	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 539 2346 -
Chr1	stalkie_big_nohaplotig	exon	24272517	24272829	100	-	.	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 2347 2659 -
Chr1	stalkie_big_nohaplotig	exon	24273025	24273084	100	-	.	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 2660 2719 -
Chr1	stalkie_big_nohaplotig	exon	24273143	24273442	100	-	.	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 2720 3019 -
Chr1	stalkie_big_nohaplotig	exon	24273499	24273665	100	-	.	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 3020 3186 -
Chr1	stalkie_big_nohaplotig	exon	24274722	24275017	100	-	.	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 3187 3482 -
Chr1	stalkie_big_nohaplotig	exon	24276418	24276699	100	-	.	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 3483 3764 -
Chr1	stalkie_big_nohaplotig	exon	24276851	24277068	100	-	.	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 3765 3982 -
Chr1	stalkie_big_nohaplotig	exon	24277134	24277448	100	-	.	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 3983 4297 -
Chr1	stalkie_big_nohaplotig	exon	24278941	24279091	99	-	.	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 4298 4448 -
Chr1	stalkie_big_nohaplotig	exon	24280258	24280414	100	-	.	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 4449 4605 -
Chr1	stalkie_big_nohaplotig	exon	24280464	24281568	99	-	.	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 4606 5713 -
Chr1	stalkie_big_nohaplotig	exon	24294196	24294339	100	-	.	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 5714 5857 -
Chr1	stalkie_big_nohaplotig	exon	24333308	24333455	100	-	.	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 5858 6005 -
Chr1	stalkie_big_nohaplotig	exon	24333527	24333809	99	-	.	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 6006 6288 -
Chr1	stalkie_big_nohaplotig	exon	24337950	24338224	100	-	.	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 6289 6563 -
Chr1	stalkie_big_nohaplotig	CDS	24270209	24270273	.	-	2	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 368 432 .
Chr1	stalkie_big_nohaplotig	CDS	24270334	24270439	.	-	0	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 433 538 .
Chr1	stalkie_big_nohaplotig	CDS	24270503	24272310	.	-	2	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 539 2346 .
Chr1	stalkie_big_nohaplotig	CDS	24272517	24272829	.	-	0	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 2347 2659 .
Chr1	stalkie_big_nohaplotig	CDS	24273025	24273084	.	-	0	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 2660 2719 .
Chr1	stalkie_big_nohaplotig	CDS	24273143	24273442	.	-	0	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 2720 3019 .
Chr1	stalkie_big_nohaplotig	CDS	24273499	24273665	.	-	2	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 3020 3186 .
Chr1	stalkie_big_nohaplotig	CDS	24274722	24275017	.	-	1	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 3187 3482 .
Chr1	stalkie_big_nohaplotig	CDS	24276418	24276699	.	-	1	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 3483 3764 .
Chr1	stalkie_big_nohaplotig	CDS	24276851	24277068	.	-	0	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 3765 3982 .
Chr1	stalkie_big_nohaplotig	CDS	24277134	24277448	.	-	0	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 3983 4297 .
Chr1	stalkie_big_nohaplotig	CDS	24278941	24279091	.	-	1	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 4298 4448 .
Chr1	stalkie_big_nohaplotig	CDS	24280258	24280414	.	-	2	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 4449 4605 .
Chr1	stalkie_big_nohaplotig	CDS	24280464	24281568	.	-	0	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 4606 5713 .
Chr1	stalkie_big_nohaplotig	CDS	24294196	24294315	.	-	0	Parent=comp161788_c0_seq1.mrna1;Target=comp161788_c0_seq1 5714 5833 .
Chr1	stalkie_big_nohaplotig	mRNA	24269101	24270099	.	-	.	ID=comp143599_c0_seq1.mrna1;geneID=comp143599_c0_seq1.path1;Name=comp143599_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.2;matches=994;mismatches=5;indels=3;unknowns=0;Target=comp143599_c0_seq1 1002 1 .;CDS_Target=comp143599_c0_seq1 113 3 .;locus=RLOC_00006570
Chr1	stalkie_big_nohaplotig	exon	24269101	24270099	99	-	.	Parent=comp143599_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	24269987	24270097	.	-	0	Parent=comp143599_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24270212	24281568	.	-	.	ID=FBgn0004875.1.mrna1;geneID=FBgn0004875.1.path1;Name=FBgn0004875.1;Dir=sensecoverage=99.9;identity=99.9;matches=5321;mismatches=4;indels=3;unknowns=0;locus=RLOC_00006570
Chr1	stalkie_big_nohaplotig	exon	24270212	24270273	100	-	.	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 5273 5334 +
Chr1	stalkie_big_nohaplotig	exon	24270334	24270439	100	-	.	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 5167 5272 +
Chr1	stalkie_big_nohaplotig	exon	24270503	24272310	100	-	.	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 3359 5166 +
Chr1	stalkie_big_nohaplotig	exon	24272517	24272829	100	-	.	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 3046 3358 +
Chr1	stalkie_big_nohaplotig	exon	24273025	24273084	100	-	.	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 2986 3045 +
Chr1	stalkie_big_nohaplotig	exon	24273143	24273442	100	-	.	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 2686 2985 +
Chr1	stalkie_big_nohaplotig	exon	24273499	24273665	100	-	.	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 2519 2685 +
Chr1	stalkie_big_nohaplotig	exon	24274722	24275017	100	-	.	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 2223 2518 +
Chr1	stalkie_big_nohaplotig	exon	24276418	24276699	100	-	.	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 1941 2222 +
Chr1	stalkie_big_nohaplotig	exon	24276851	24277068	100	-	.	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 1723 1940 +
Chr1	stalkie_big_nohaplotig	exon	24277134	24277448	100	-	.	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 1408 1722 +
Chr1	stalkie_big_nohaplotig	exon	24278941	24279091	99	-	.	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 1257 1407 +
Chr1	stalkie_big_nohaplotig	exon	24280258	24280399	100	-	.	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 1115 1256 +
Chr1	stalkie_big_nohaplotig	exon	24280464	24281568	99	-	.	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 7 1114 +
Chr1	stalkie_big_nohaplotig	CDS	24270212	24270273	.	-	2	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 5273 5334 +
Chr1	stalkie_big_nohaplotig	CDS	24270334	24270439	.	-	0	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 5167 5272 +
Chr1	stalkie_big_nohaplotig	CDS	24270503	24272310	.	-	2	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 3359 5166 +
Chr1	stalkie_big_nohaplotig	CDS	24272517	24272829	.	-	0	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 3046 3358 +
Chr1	stalkie_big_nohaplotig	CDS	24273025	24273084	.	-	0	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 2986 3045 +
Chr1	stalkie_big_nohaplotig	CDS	24273143	24273442	.	-	0	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 2686 2985 +
Chr1	stalkie_big_nohaplotig	CDS	24273499	24273665	.	-	2	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 2519 2685 +
Chr1	stalkie_big_nohaplotig	CDS	24274722	24275017	.	-	1	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 2223 2518 +
Chr1	stalkie_big_nohaplotig	CDS	24276418	24276699	.	-	1	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 1941 2222 +
Chr1	stalkie_big_nohaplotig	CDS	24276851	24277068	.	-	0	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 1723 1940 +
Chr1	stalkie_big_nohaplotig	CDS	24277134	24277448	.	-	0	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 1408 1722 +
Chr1	stalkie_big_nohaplotig	CDS	24278941	24279091	.	-	1	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 1257 1407 +
Chr1	stalkie_big_nohaplotig	CDS	24280258	24280399	.	-	2	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 1115 1256 +
Chr1	stalkie_big_nohaplotig	CDS	24280464	24281568	.	-	0	Parent=FBgn0004875.1.mrna1;Target=FBgn0004875.1 7 1114 +
Chr1	gffcl	locus	24264545	24265563	.	+	.	ID=RLOC_00006571;geneIDs=comp147061_c0_seq1.path2;transcripts=comp147061_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	24264545	24265563	.	+	.	ID=comp147061_c0_seq1.mrna2;geneID=comp147061_c0_seq1.path2;Name=comp147061_c0_seq1;Dir=indeterminatecoverage=91.0;identity=98.6;matches=1007;mismatches=7;indels=7;unknowns=0;Target=comp147061_c0_seq1 1116 101 .;CDS_Target=comp147061_c0_seq1 633 418 .;locus=RLOC_00006571
Chr1	stalkie_big_nohaplotig	exon	24264545	24265563	98	+	.	Parent=comp147061_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	24264862	24265077	.	+	0	Parent=comp147061_c0_seq1.mrna2
Chr1	gffcl	locus	24329114	24329989	.	+	.	ID=RLOC_00006572;geneIDs=comp150352_c0_seq1.path1;transcripts=comp150352_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24329114	24329989	.	+	.	ID=comp150352_c0_seq1.mrna1;geneID=comp150352_c0_seq1.path1;Name=comp150352_c0_seq1;Dir=indeterminatecoverage=99.3;identity=98.8;matches=875;mismatches=1;indels=10;unknowns=0;Target=comp150352_c0_seq1 892 7 .;CDS_Target=comp150352_c0_seq1 713 117 .;locus=RLOC_00006572
Chr1	stalkie_big_nohaplotig	exon	24329114	24329989	98	+	.	Parent=comp150352_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	24329214	24329810	.	+	0	Parent=comp150352_c0_seq1.mrna1
Chr1	gffcl	locus	24344681	24346725	.	+	.	ID=RLOC_00006573;geneIDs=comp144613_c0_seq1.path1;transcripts=comp144613_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24344681	24346725	.	+	.	ID=comp144613_c0_seq1.mrna1;geneID=comp144613_c0_seq1.path1;Name=comp144613_c0_seq1;Dir=antisensecoverage=92.7;identity=98.7;matches=757;mismatches=3;indels=7;unknowns=0;locus=RLOC_00006573
Chr1	stalkie_big_nohaplotig	exon	24344681	24344762	100	+	.	Parent=comp144613_c0_seq1.mrna1;Target=comp144613_c0_seq1 746 827 -
Chr1	stalkie_big_nohaplotig	exon	24346048	24346725	98	+	.	Parent=comp144613_c0_seq1.mrna1;Target=comp144613_c0_seq1 61 745 -
Chr1	stalkie_big_nohaplotig	CDS	24344683	24344762	.	+	0	Parent=comp144613_c0_seq1.mrna1;Target=comp144613_c0_seq1 746 825 .
Chr1	stalkie_big_nohaplotig	CDS	24346048	24346117	.	+	1	Parent=comp144613_c0_seq1.mrna1;Target=comp144613_c0_seq1 676 745 .
Chr1	gffcl	locus	24356496	24356768	.	+	.	ID=RLOC_00006574;geneIDs=comp137542_c0_seq1.path1;transcripts=comp137542_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24356496	24356768	.	+	.	ID=comp137542_c0_seq1.mrna1;geneID=comp137542_c0_seq1.path1;Name=comp137542_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=267;mismatches=6;indels=1;unknowns=0;Target=comp137542_c0_seq1 274 1 .;CDS_Target=comp137542_c0_seq1 86 3 .;locus=RLOC_00006574
Chr1	stalkie_big_nohaplotig	exon	24356496	24356768	97	+	.	Parent=comp137542_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	24356498	24356581	.	+	0	Parent=comp137542_c0_seq1.mrna1
Chr1	gffcl	locus	24364808	24367525	.	-	.	ID=RLOC_00006575;geneIDs=comp129010_c0_seq1.path1,comp151701_c0_seq1.path1;transcripts=comp129010_c0_seq1.mrna1,comp151701_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24364808	24367293	.	-	.	ID=comp129010_c0_seq1.mrna1;geneID=comp129010_c0_seq1.path1;Name=comp129010_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=879;mismatches=4;indels=1;unknowns=0;Target=comp129010_c0_seq1 49 153 .;locus=RLOC_00006575
Chr1	stalkie_big_nohaplotig	exon	24364808	24365551	99	-	.	Parent=comp129010_c0_seq1.mrna1;Target=comp129010_c0_seq1 1 743 -
Chr1	stalkie_big_nohaplotig	exon	24365613	24365729	100	-	.	Parent=comp129010_c0_seq1.mrna1;Target=comp129010_c0_seq1 744 860 -
Chr1	stalkie_big_nohaplotig	exon	24367271	24367293	100	-	.	Parent=comp129010_c0_seq1.mrna1;Target=comp129010_c0_seq1 861 883 -
Chr1	stalkie_big_nohaplotig	CDS	24364857	24364961	.	-	0	Parent=comp129010_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24367130	24367525	.	-	.	ID=comp151701_c0_seq1.mrna1;geneID=comp151701_c0_seq1.path1;Name=comp151701_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=395;mismatches=1;indels=0;unknowns=0;Target=comp151701_c0_seq1 397 2 .;CDS_Target=comp151701_c0_seq1 105 4 .;locus=RLOC_00006575
Chr1	stalkie_big_nohaplotig	exon	24367130	24367525	99	-	.	Parent=comp151701_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	24367422	24367523	.	-	0	Parent=comp151701_c0_seq1.mrna1
Chr1	gffcl	locus	24366811	24367103	.	+	.	ID=RLOC_00006576;geneIDs=comp67130_c0_seq1.path1;transcripts=comp67130_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24366811	24367103	.	+	.	ID=comp67130_c0_seq1.mrna1;geneID=comp67130_c0_seq1.path1;Name=comp67130_c0_seq1;Dir=indeterminatecoverage=94.5;identity=100.0;matches=293;mismatches=0;indels=0;unknowns=0;Target=comp67130_c0_seq1 310 18 .;CDS_Target=comp67130_c0_seq1 199 56 .;locus=RLOC_00006576
Chr1	stalkie_big_nohaplotig	exon	24366811	24367103	100	+	.	Parent=comp67130_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	24366849	24366992	.	+	0	Parent=comp67130_c0_seq1.mrna1
Chr1	gffcl	locus	24399148	24400938	.	-	.	ID=RLOC_00006577;geneIDs=FBgn0028487.4.path1;transcripts=FBgn0028487.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24399148	24400938	.	-	.	ID=FBgn0028487.4.mrna1;geneID=FBgn0028487.4.path1;Name=FBgn0028487.4;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1780;mismatches=11;indels=0;unknowns=0;Target=FBgn0028487.4 1791 1 .;locus=RLOC_00006577
Chr1	stalkie_big_nohaplotig	exon	24399148	24400938	99	-	.	Parent=FBgn0028487.4.mrna1
Chr1	stalkie_big_nohaplotig	CDS	24399148	24400938	.	-	0	Parent=FBgn0028487.4.mrna1
Chr1	gffcl	locus	24425548	24426143	.	-	.	ID=RLOC_00006578;geneIDs=comp153385_c0_seq1.path1;transcripts=comp153385_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24425548	24426143	.	-	.	ID=comp153385_c0_seq1.mrna1;geneID=comp153385_c0_seq1.path1;Name=comp153385_c0_seq1;Dir=sensecoverage=89.0;identity=99.6;matches=514;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006578
Chr1	stalkie_big_nohaplotig	exon	24425548	24425990	99	-	.	Parent=comp153385_c0_seq1.mrna1;Target=comp153385_c0_seq1 85 527 +
Chr1	stalkie_big_nohaplotig	exon	24426071	24426143	100	-	.	Parent=comp153385_c0_seq1.mrna1;Target=comp153385_c0_seq1 12 84 +
Chr1	stalkie_big_nohaplotig	CDS	24425762	24425990	.	-	1	Parent=comp153385_c0_seq1.mrna1;Target=comp153385_c0_seq1 85 313 +
Chr1	stalkie_big_nohaplotig	CDS	24426071	24426087	.	-	0	Parent=comp153385_c0_seq1.mrna1;Target=comp153385_c0_seq1 68 84 +
Chr1	gffcl	locus	24441675	24442984	.	-	.	ID=RLOC_00006579;geneIDs=comp161896_c0_seq1.path1;transcripts=comp161896_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24441675	24442984	.	-	.	ID=comp161896_c0_seq1.mrna1;geneID=comp161896_c0_seq1.path1;Name=comp161896_c0_seq1;Dir=antisensecoverage=93.6;identity=99.2;matches=926;mismatches=6;indels=1;unknowns=0;locus=RLOC_00006579
Chr1	stalkie_big_nohaplotig	exon	24441675	24441722	95	-	.	Parent=comp161896_c0_seq1.mrna1;Target=comp161896_c0_seq1 1 48 -
Chr1	stalkie_big_nohaplotig	exon	24441788	24441996	98	-	.	Parent=comp161896_c0_seq1.mrna1;Target=comp161896_c0_seq1 49 257 -
Chr1	stalkie_big_nohaplotig	exon	24442061	24442082	100	-	.	Parent=comp161896_c0_seq1.mrna1;Target=comp161896_c0_seq1 258 279 -
Chr1	stalkie_big_nohaplotig	exon	24442195	24442426	100	-	.	Parent=comp161896_c0_seq1.mrna1;Target=comp161896_c0_seq1 280 511 -
Chr1	stalkie_big_nohaplotig	exon	24442479	24442733	99	-	.	Parent=comp161896_c0_seq1.mrna1;Target=comp161896_c0_seq1 512 766 -
Chr1	stalkie_big_nohaplotig	exon	24442819	24442984	99	-	.	Parent=comp161896_c0_seq1.mrna1;Target=comp161896_c0_seq1 767 933 -
Chr1	stalkie_big_nohaplotig	CDS	24441818	24441996	.	-	2	Parent=comp161896_c0_seq1.mrna1;Target=comp161896_c0_seq1 79 257 .
Chr1	stalkie_big_nohaplotig	CDS	24442061	24442082	.	-	0	Parent=comp161896_c0_seq1.mrna1;Target=comp161896_c0_seq1 258 279 .
Chr1	stalkie_big_nohaplotig	CDS	24442195	24442426	.	-	1	Parent=comp161896_c0_seq1.mrna1;Target=comp161896_c0_seq1 280 511 .
Chr1	stalkie_big_nohaplotig	CDS	24442479	24442729	.	-	0	Parent=comp161896_c0_seq1.mrna1;Target=comp161896_c0_seq1 512 762 .
Chr1	gffcl	locus	24458171	24473555	.	-	.	ID=RLOC_00006580;geneIDs=FBgn0035429.path1;transcripts=FBgn0035429.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24458171	24473555	.	-	.	ID=FBgn0035429.mrna1;geneID=FBgn0035429.path1;Name=FBgn0035429;Dir=sensecoverage=97.0;identity=99.6;matches=510;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006580
Chr1	stalkie_big_nohaplotig	exon	24458171	24458287	98	-	.	Parent=FBgn0035429.mrna1;Target=FBgn0035429 396 512 +
Chr1	stalkie_big_nohaplotig	exon	24458374	24458524	100	-	.	Parent=FBgn0035429.mrna1;Target=FBgn0035429 245 395 +
Chr1	stalkie_big_nohaplotig	exon	24460096	24460227	100	-	.	Parent=FBgn0035429.mrna1;Target=FBgn0035429 113 244 +
Chr1	stalkie_big_nohaplotig	exon	24473444	24473555	100	-	.	Parent=FBgn0035429.mrna1;Target=FBgn0035429 1 112 +
Chr1	stalkie_big_nohaplotig	CDS	24458173	24458287	.	-	1	Parent=FBgn0035429.mrna1;Target=FBgn0035429 396 510 +
Chr1	stalkie_big_nohaplotig	CDS	24458374	24458524	.	-	2	Parent=FBgn0035429.mrna1;Target=FBgn0035429 245 395 +
Chr1	stalkie_big_nohaplotig	CDS	24460096	24460227	.	-	2	Parent=FBgn0035429.mrna1;Target=FBgn0035429 113 244 +
Chr1	stalkie_big_nohaplotig	CDS	24473444	24473555	.	-	0	Parent=FBgn0035429.mrna1;Target=FBgn0035429 1 112 +
Chr1	gffcl	locus	24474420	26383375	.	-	.	ID=RLOC_00006581;geneIDs=comp128740_c0_seq1.path1;transcripts=comp128740_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24474420	26383375	.	-	.	ID=comp128740_c0_seq1.mrna1;geneID=comp128740_c0_seq1.path1;Name=comp128740_c0_seq1;Dir=indeterminatecoverage=93.9;identity=100.0;matches=325;mismatches=0;indels=0;unknowns=0;Target=comp128740_c0_seq1 112 2 .;locus=RLOC_00006581
Chr1	stalkie_big_nohaplotig	exon	24474420	24474431	100	-	.	Parent=comp128740_c0_seq1.mrna1;Target=comp128740_c0_seq1 325 314 .
Chr1	stalkie_big_nohaplotig	exon	24480725	24480727	100	-	.	Parent=comp128740_c0_seq1.mrna1;Target=comp128740_c0_seq1 313 311 .
Chr1	stalkie_big_nohaplotig	exon	24487973	24487974	100	-	.	Parent=comp128740_c0_seq1.mrna1;Target=comp128740_c0_seq1 310 309 .
Chr1	stalkie_big_nohaplotig	exon	24501475	24501476	100	-	.	Parent=comp128740_c0_seq1.mrna1;Target=comp128740_c0_seq1 308 307 .
Chr1	stalkie_big_nohaplotig	exon	26383070	26383375	100	-	.	Parent=comp128740_c0_seq1.mrna1;Target=comp128740_c0_seq1 306 1 .
Chr1	stalkie_big_nohaplotig	CDS	26383264	26383374	.	-	0	Parent=comp128740_c0_seq1.mrna1
Chr1	gffcl	locus	24529544	24530140	.	-	.	ID=RLOC_00006582;geneIDs=comp149737_c0_seq1.path1;transcripts=comp149737_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24529544	24530140	.	-	.	ID=comp149737_c0_seq1.mrna1;geneID=comp149737_c0_seq1.path1;Name=comp149737_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=530;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006582
Chr1	stalkie_big_nohaplotig	exon	24529544	24529978	99	-	.	Parent=comp149737_c0_seq1.mrna1;Target=comp149737_c0_seq1 100 534 +
Chr1	stalkie_big_nohaplotig	exon	24530042	24530140	100	-	.	Parent=comp149737_c0_seq1.mrna1;Target=comp149737_c0_seq1 1 99 +
Chr1	stalkie_big_nohaplotig	CDS	24529715	24529978	.	-	0	Parent=comp149737_c0_seq1.mrna1;Target=comp149737_c0_seq1 100 363 +
Chr1	stalkie_big_nohaplotig	CDS	24530042	24530083	.	-	0	Parent=comp149737_c0_seq1.mrna1;Target=comp149737_c0_seq1 58 99 +
Chr1	gffcl	locus	24533162	24537429	.	-	.	ID=RLOC_00006583;geneIDs=FBgn0035427.1.path1;transcripts=FBgn0035427.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24533162	24537429	.	-	.	ID=FBgn0035427.1.mrna1;geneID=FBgn0035427.1.path1;Name=FBgn0035427.1;Dir=sensecoverage=100.0;identity=99.8;matches=431;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006583
Chr1	stalkie_big_nohaplotig	exon	24533162	24533224	100	-	.	Parent=FBgn0035427.1.mrna1;Target=FBgn0035427.1 370 432 +
Chr1	stalkie_big_nohaplotig	exon	24533298	24533420	99	-	.	Parent=FBgn0035427.1.mrna1;Target=FBgn0035427.1 247 369 +
Chr1	stalkie_big_nohaplotig	exon	24535475	24535635	100	-	.	Parent=FBgn0035427.1.mrna1;Target=FBgn0035427.1 86 246 +
Chr1	stalkie_big_nohaplotig	exon	24537345	24537429	100	-	.	Parent=FBgn0035427.1.mrna1;Target=FBgn0035427.1 1 85 +
Chr1	stalkie_big_nohaplotig	CDS	24533162	24533224	.	-	0	Parent=FBgn0035427.1.mrna1;Target=FBgn0035427.1 370 432 +
Chr1	stalkie_big_nohaplotig	CDS	24533298	24533420	.	-	0	Parent=FBgn0035427.1.mrna1;Target=FBgn0035427.1 247 369 +
Chr1	stalkie_big_nohaplotig	CDS	24535475	24535635	.	-	2	Parent=FBgn0035427.1.mrna1;Target=FBgn0035427.1 86 246 +
Chr1	stalkie_big_nohaplotig	CDS	24537345	24537429	.	-	0	Parent=FBgn0035427.1.mrna1;Target=FBgn0035427.1 1 85 +
Chr1	gffcl	locus	24553780	24561428	.	+	.	ID=RLOC_00006584;geneIDs=FBgn0035430.1.path1;transcripts=FBgn0035430.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24553780	24561428	.	+	.	ID=FBgn0035430.1.mrna1;geneID=FBgn0035430.1.path1;Name=FBgn0035430.1;Dir=sensecoverage=100.0;identity=99.1;matches=3102;mismatches=27;indels=0;unknowns=0;locus=RLOC_00006584
Chr1	stalkie_big_nohaplotig	exon	24553780	24553914	98	+	.	Parent=FBgn0035430.1.mrna1;Target=FBgn0035430.1 1 135 +
Chr1	stalkie_big_nohaplotig	exon	24558371	24558691	99	+	.	Parent=FBgn0035430.1.mrna1;Target=FBgn0035430.1 136 456 +
Chr1	stalkie_big_nohaplotig	exon	24558756	24561428	99	+	.	Parent=FBgn0035430.1.mrna1;Target=FBgn0035430.1 457 3129 +
Chr1	stalkie_big_nohaplotig	CDS	24553780	24553914	.	+	0	Parent=FBgn0035430.1.mrna1;Target=FBgn0035430.1 1 135 +
Chr1	stalkie_big_nohaplotig	CDS	24558371	24558691	.	+	0	Parent=FBgn0035430.1.mrna1;Target=FBgn0035430.1 136 456 +
Chr1	stalkie_big_nohaplotig	CDS	24558756	24561428	.	+	0	Parent=FBgn0035430.1.mrna1;Target=FBgn0035430.1 457 3129 +
Chr1	gffcl	locus	24587242	24595042	.	+	.	ID=RLOC_00006586;geneIDs=FBgn0035145.1.path1;transcripts=FBgn0035145.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24587242	24595042	.	+	.	ID=FBgn0035145.1.mrna1;geneID=FBgn0035145.1.path1;Name=FBgn0035145.1;Dir=sensecoverage=100.0;identity=99.7;matches=4571;mismatches=16;indels=0;unknowns=0;locus=RLOC_00006586
Chr1	stalkie_big_nohaplotig	exon	24587242	24587414	100	+	.	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 1 173 +
Chr1	stalkie_big_nohaplotig	exon	24587473	24587605	100	+	.	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 174 306 +
Chr1	stalkie_big_nohaplotig	exon	24587689	24587988	99	+	.	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 307 606 +
Chr1	stalkie_big_nohaplotig	exon	24588057	24588189	100	+	.	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 607 739 +
Chr1	stalkie_big_nohaplotig	exon	24588245	24588748	99	+	.	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 740 1243 +
Chr1	stalkie_big_nohaplotig	exon	24588812	24589019	100	+	.	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 1244 1451 +
Chr1	stalkie_big_nohaplotig	exon	24591232	24591391	100	+	.	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 1452 1611 +
Chr1	stalkie_big_nohaplotig	exon	24591451	24591685	99	+	.	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 1612 1846 +
Chr1	stalkie_big_nohaplotig	exon	24591756	24592021	100	+	.	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 1847 2112 +
Chr1	stalkie_big_nohaplotig	exon	24592092	24592407	100	+	.	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 2113 2428 +
Chr1	stalkie_big_nohaplotig	exon	24592612	24592916	99	+	.	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 2429 2733 +
Chr1	stalkie_big_nohaplotig	exon	24592993	24593184	100	+	.	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 2734 2925 +
Chr1	stalkie_big_nohaplotig	exon	24593249	24594499	99	+	.	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 2926 4176 +
Chr1	stalkie_big_nohaplotig	exon	24594565	24594834	98	+	.	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 4177 4446 +
Chr1	stalkie_big_nohaplotig	exon	24594902	24595042	99	+	.	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 4447 4587 +
Chr1	stalkie_big_nohaplotig	CDS	24587242	24587414	.	+	0	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 1 173 +
Chr1	stalkie_big_nohaplotig	CDS	24587473	24587605	.	+	1	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 174 306 +
Chr1	stalkie_big_nohaplotig	CDS	24587689	24587988	.	+	0	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 307 606 +
Chr1	stalkie_big_nohaplotig	CDS	24588057	24588189	.	+	0	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 607 739 +
Chr1	stalkie_big_nohaplotig	CDS	24588245	24588748	.	+	2	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 740 1243 +
Chr1	stalkie_big_nohaplotig	CDS	24588812	24589019	.	+	2	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 1244 1451 +
Chr1	stalkie_big_nohaplotig	CDS	24591232	24591391	.	+	1	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 1452 1611 +
Chr1	stalkie_big_nohaplotig	CDS	24591451	24591685	.	+	0	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 1612 1846 +
Chr1	stalkie_big_nohaplotig	CDS	24591756	24592021	.	+	2	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 1847 2112 +
Chr1	stalkie_big_nohaplotig	CDS	24592092	24592407	.	+	0	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 2113 2428 +
Chr1	stalkie_big_nohaplotig	CDS	24592612	24592916	.	+	2	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 2429 2733 +
Chr1	stalkie_big_nohaplotig	CDS	24592993	24593184	.	+	0	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 2734 2925 +
Chr1	stalkie_big_nohaplotig	CDS	24593249	24594499	.	+	0	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 2926 4176 +
Chr1	stalkie_big_nohaplotig	CDS	24594565	24594834	.	+	0	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 4177 4446 +
Chr1	stalkie_big_nohaplotig	CDS	24594902	24595042	.	+	0	Parent=FBgn0035145.1.mrna1;Target=FBgn0035145.1 4447 4587 +
Chr1	gffcl	locus	24597079	24598026	.	+	.	ID=RLOC_00006587;geneIDs=comp158738_c0_seq1.path1;transcripts=comp158738_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24597079	24598026	.	+	.	ID=comp158738_c0_seq1.mrna1;geneID=comp158738_c0_seq1.path1;Name=comp158738_c0_seq1;Dir=indeterminatecoverage=98.5;identity=94.3;matches=929;mismatches=11;indels=45;unknowns=0;Target=comp158738_c0_seq1 992 16 .;CDS_Target=comp158738_c0_seq1 792 730 .;locus=RLOC_00006587
Chr1	stalkie_big_nohaplotig	exon	24597079	24598026	94	+	.	Parent=comp158738_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	24597776	24597838	.	+	0	Parent=comp158738_c0_seq1.mrna1
Chr1	gffcl	locus	24598797	24627590	.	-	.	ID=RLOC_00006588;geneIDs=FBgn0035146.1.path1;transcripts=FBgn0035146.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24598797	24627590	.	-	.	ID=FBgn0035146.1.mrna1;geneID=FBgn0035146.1.path1;Name=FBgn0035146.1;Dir=sensecoverage=100.0;identity=99.0;matches=1233;mismatches=12;indels=0;unknowns=0;locus=RLOC_00006588
Chr1	stalkie_big_nohaplotig	exon	24598797	24598942	97	-	.	Parent=FBgn0035146.1.mrna1;Target=FBgn0035146.1 1100 1245 +
Chr1	stalkie_big_nohaplotig	exon	24599007	24599313	98	-	.	Parent=FBgn0035146.1.mrna1;Target=FBgn0035146.1 793 1099 +
Chr1	stalkie_big_nohaplotig	exon	24600785	24600984	99	-	.	Parent=FBgn0035146.1.mrna1;Target=FBgn0035146.1 593 792 +
Chr1	stalkie_big_nohaplotig	exon	24601055	24601345	99	-	.	Parent=FBgn0035146.1.mrna1;Target=FBgn0035146.1 302 592 +
Chr1	stalkie_big_nohaplotig	exon	24601416	24601533	99	-	.	Parent=FBgn0035146.1.mrna1;Target=FBgn0035146.1 184 301 +
Chr1	stalkie_big_nohaplotig	exon	24601601	24601644	100	-	.	Parent=FBgn0035146.1.mrna1;Target=FBgn0035146.1 140 183 +
Chr1	stalkie_big_nohaplotig	exon	24601734	24601803	100	-	.	Parent=FBgn0035146.1.mrna1;Target=FBgn0035146.1 70 139 +
Chr1	stalkie_big_nohaplotig	exon	24627522	24627590	100	-	.	Parent=FBgn0035146.1.mrna1;Target=FBgn0035146.1 1 69 +
Chr1	stalkie_big_nohaplotig	CDS	24598797	24598942	.	-	2	Parent=FBgn0035146.1.mrna1;Target=FBgn0035146.1 1100 1245 +
Chr1	stalkie_big_nohaplotig	CDS	24599007	24599313	.	-	0	Parent=FBgn0035146.1.mrna1;Target=FBgn0035146.1 793 1099 +
Chr1	stalkie_big_nohaplotig	CDS	24600785	24600984	.	-	2	Parent=FBgn0035146.1.mrna1;Target=FBgn0035146.1 593 792 +
Chr1	stalkie_big_nohaplotig	CDS	24601055	24601345	.	-	2	Parent=FBgn0035146.1.mrna1;Target=FBgn0035146.1 302 592 +
Chr1	stalkie_big_nohaplotig	CDS	24601416	24601533	.	-	0	Parent=FBgn0035146.1.mrna1;Target=FBgn0035146.1 184 301 +
Chr1	stalkie_big_nohaplotig	CDS	24601601	24601644	.	-	2	Parent=FBgn0035146.1.mrna1;Target=FBgn0035146.1 140 183 +
Chr1	stalkie_big_nohaplotig	CDS	24601734	24601803	.	-	0	Parent=FBgn0035146.1.mrna1;Target=FBgn0035146.1 70 139 +
Chr1	stalkie_big_nohaplotig	CDS	24627522	24627590	.	-	0	Parent=FBgn0035146.1.mrna1;Target=FBgn0035146.1 1 69 +
Chr1	gffcl	locus	24797836	24807791	.	+	.	ID=RLOC_00006591;geneIDs=comp134988_c1_seq1.path1;transcripts=comp134988_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24797836	24807791	.	+	.	ID=comp134988_c1_seq1.mrna1;geneID=comp134988_c1_seq1.path1;Name=comp134988_c1_seq1;Dir=sensecoverage=100.0;identity=99.1;matches=642;mismatches=1;indels=5;unknowns=0;Target=comp134988_c1_seq1 35 286 +;locus=RLOC_00006591
Chr1	stalkie_big_nohaplotig	exon	24797836	24798364	99	+	.	Parent=comp134988_c1_seq1.mrna1;Target=comp134988_c1_seq1 1 529 +
Chr1	stalkie_big_nohaplotig	exon	24807676	24807791	96	+	.	Parent=comp134988_c1_seq1.mrna1;Target=comp134988_c1_seq1 530 646 +
Chr1	stalkie_big_nohaplotig	CDS	24797870	24798121	.	+	0	Parent=comp134988_c1_seq1.mrna1
Chr1	gffcl	locus	24807979	24813743	.	+	.	ID=RLOC_00006592;geneIDs=FBgn0004635.1.path1;transcripts=FBgn0004635.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24807979	24813743	.	+	.	ID=FBgn0004635.1.mrna1;geneID=FBgn0004635.1.path1;Name=FBgn0004635.1;Dir=sensecoverage=100.0;identity=99.9;matches=992;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006592
Chr1	stalkie_big_nohaplotig	exon	24807979	24808236	100	+	.	Parent=FBgn0004635.1.mrna1;Target=FBgn0004635.1 1 258 +
Chr1	stalkie_big_nohaplotig	exon	24812278	24812695	99	+	.	Parent=FBgn0004635.1.mrna1;Target=FBgn0004635.1 259 676 +
Chr1	stalkie_big_nohaplotig	exon	24813427	24813743	100	+	.	Parent=FBgn0004635.1.mrna1;Target=FBgn0004635.1 677 993 +
Chr1	stalkie_big_nohaplotig	CDS	24807979	24808236	.	+	0	Parent=FBgn0004635.1.mrna1;Target=FBgn0004635.1 1 258 +
Chr1	stalkie_big_nohaplotig	CDS	24812278	24812695	.	+	0	Parent=FBgn0004635.1.mrna1;Target=FBgn0004635.1 259 676 +
Chr1	stalkie_big_nohaplotig	CDS	24813427	24813743	.	+	2	Parent=FBgn0004635.1.mrna1;Target=FBgn0004635.1 677 993 +
Chr1	gffcl	locus	24925457	24926518	.	+	.	ID=RLOC_00006594;geneIDs=ORF1742.path1;transcripts=ORF1742.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24925457	24926518	.	+	.	ID=ORF1742.mrna1;geneID=ORF1742.path1;Name=ORF1742;Dir=antisensecoverage=100.0;identity=99.3;matches=1001;mismatches=7;indels=0;unknowns=0;Target=ORF1742 861 1007 .;locus=RLOC_00006594
Chr1	stalkie_big_nohaplotig	exon	24925457	24925706	100	+	.	Parent=ORF1742.mrna1;Target=ORF1742 759 1008 -
Chr1	stalkie_big_nohaplotig	exon	24925761	24926518	99	+	.	Parent=ORF1742.mrna1;Target=ORF1742 1 758 -
Chr1	stalkie_big_nohaplotig	CDS	24925458	24925604	.	+	0	Parent=ORF1742.mrna1
Chr1	gffcl	locus	24985652	24986293	.	-	.	ID=RLOC_00006595;geneIDs=FBgn0030050.4.path1;transcripts=FBgn0030050.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	24985652	24986293	.	-	.	ID=FBgn0030050.4.mrna1;geneID=FBgn0030050.4.path1;Name=FBgn0030050.4;Dir=sensecoverage=100.0;identity=100.0;matches=513;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006595
Chr1	stalkie_big_nohaplotig	exon	24985652	24985990	100	-	.	Parent=FBgn0030050.4.mrna1;Target=FBgn0030050.4 175 513 +
Chr1	stalkie_big_nohaplotig	exon	24986055	24986134	100	-	.	Parent=FBgn0030050.4.mrna1;Target=FBgn0030050.4 95 174 +
Chr1	stalkie_big_nohaplotig	exon	24986200	24986293	100	-	.	Parent=FBgn0030050.4.mrna1;Target=FBgn0030050.4 1 94 +
Chr1	stalkie_big_nohaplotig	CDS	24985652	24985990	.	-	0	Parent=FBgn0030050.4.mrna1;Target=FBgn0030050.4 175 513 +
Chr1	stalkie_big_nohaplotig	CDS	24986055	24986134	.	-	2	Parent=FBgn0030050.4.mrna1;Target=FBgn0030050.4 95 174 +
Chr1	stalkie_big_nohaplotig	CDS	24986200	24986293	.	-	0	Parent=FBgn0030050.4.mrna1;Target=FBgn0030050.4 1 94 +
Chr1	gffcl	locus	25004720	25005361	.	-	.	ID=RLOC_00006596;geneIDs=FBgn0030050.4.path2;transcripts=FBgn0030050.4.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	25004720	25005361	.	-	.	ID=FBgn0030050.4.mrna2;geneID=FBgn0030050.4.path2;Name=FBgn0030050.4;Dir=sensecoverage=100.0;identity=100.0;matches=513;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006596
Chr1	stalkie_big_nohaplotig	exon	25004720	25005058	100	-	.	Parent=FBgn0030050.4.mrna2;Target=FBgn0030050.4 175 513 +
Chr1	stalkie_big_nohaplotig	exon	25005123	25005202	100	-	.	Parent=FBgn0030050.4.mrna2;Target=FBgn0030050.4 95 174 +
Chr1	stalkie_big_nohaplotig	exon	25005268	25005361	100	-	.	Parent=FBgn0030050.4.mrna2;Target=FBgn0030050.4 1 94 +
Chr1	stalkie_big_nohaplotig	CDS	25004720	25005058	.	-	0	Parent=FBgn0030050.4.mrna2;Target=FBgn0030050.4 175 513 +
Chr1	stalkie_big_nohaplotig	CDS	25005123	25005202	.	-	2	Parent=FBgn0030050.4.mrna2;Target=FBgn0030050.4 95 174 +
Chr1	stalkie_big_nohaplotig	CDS	25005268	25005361	.	-	0	Parent=FBgn0030050.4.mrna2;Target=FBgn0030050.4 1 94 +
Chr1	gffcl	locus	25009159	25009517	.	-	.	ID=RLOC_00006597;geneIDs=comp146925_c0_seq1.path1;transcripts=comp146925_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25009159	25009517	.	-	.	ID=comp146925_c0_seq1.mrna1;geneID=comp146925_c0_seq1.path1;Name=comp146925_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=294;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006597
Chr1	stalkie_big_nohaplotig	exon	25009159	25009404	99	-	.	Parent=comp146925_c0_seq1.mrna1;Target=comp146925_c0_seq1 50 295 +
Chr1	stalkie_big_nohaplotig	exon	25009469	25009517	100	-	.	Parent=comp146925_c0_seq1.mrna1;Target=comp146925_c0_seq1 1 49 +
Chr1	stalkie_big_nohaplotig	CDS	25009159	25009404	.	-	0	Parent=comp146925_c0_seq1.mrna1;Target=comp146925_c0_seq1 50 295 +
Chr1	stalkie_big_nohaplotig	CDS	25009469	25009516	.	-	0	Parent=comp146925_c0_seq1.mrna1;Target=comp146925_c0_seq1 2 49 +
Chr1	gffcl	locus	25046180	25217094	.	-	.	ID=RLOC_00006598;geneIDs=FBgn0004635.2.path2;transcripts=FBgn0004635.2.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	25046180	25217094	.	-	.	ID=FBgn0004635.2.mrna2;geneID=FBgn0004635.2.path2;Name=FBgn0004635.2;Dir=sensecoverage=65.2;identity=99.6;matches=744;mismatches=3;indels=0;unknowns=0;locus=RLOC_00006598
Chr1	stalkie_big_nohaplotig	exon	25046180	25046487	100	-	.	Parent=FBgn0004635.2.mrna2;Target=FBgn0004635.2 839 1146 +
Chr1	stalkie_big_nohaplotig	exon	25046575	25046994	99	-	.	Parent=FBgn0004635.2.mrna2;Target=FBgn0004635.2 419 838 +
Chr1	stalkie_big_nohaplotig	exon	25216245	25216260	87	-	.	Parent=FBgn0004635.2.mrna2;Target=FBgn0004635.2 403 418 +
Chr1	stalkie_big_nohaplotig	exon	25217093	25217094	100	-	.	Parent=FBgn0004635.2.mrna2;Target=FBgn0004635.2 401 402 +
Chr1	stalkie_big_nohaplotig	CDS	25046180	25046487	.	-	1	Parent=FBgn0004635.2.mrna2;Target=FBgn0004635.2 839 1146 +
Chr1	stalkie_big_nohaplotig	CDS	25046575	25046994	.	-	1	Parent=FBgn0004635.2.mrna2;Target=FBgn0004635.2 419 838 +
Chr1	stalkie_big_nohaplotig	CDS	25216245	25216260	.	-	2	Parent=FBgn0004635.2.mrna2;Target=FBgn0004635.2 403 418 +
Chr1	stalkie_big_nohaplotig	CDS	25217093	25217094	.	-	1	Parent=FBgn0004635.2.mrna2;Target=FBgn0004635.2 401 402 +
Chr1	gffcl	locus	25064479	25065120	.	-	.	ID=RLOC_00006600;geneIDs=FBgn0035831.1.path1;transcripts=FBgn0035831.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25064479	25065120	.	-	.	ID=FBgn0035831.1.mrna1;geneID=FBgn0035831.1.path1;Name=FBgn0035831.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=639;mismatches=3;indels=0;unknowns=0;Target=FBgn0035831.1 642 1 .;locus=RLOC_00006600
Chr1	stalkie_big_nohaplotig	exon	25064479	25065120	99	-	.	Parent=FBgn0035831.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	25064479	25065120	.	-	0	Parent=FBgn0035831.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25069295	25080492	.	+	.	ID=FBgn0043458.1.mrna1;geneID=FBgn0043458.1.path1;Name=FBgn0043458.1;Dir=sensecoverage=100.0;identity=99.8;matches=2314;mismatches=4;indels=1;unknowns=0;locus=RLOC_00006601
Chr1	stalkie_big_nohaplotig	exon	25069295	25069311	94	+	.	Parent=FBgn0043458.1.mrna1;Target=FBgn0043458.1 1 18 +
Chr1	stalkie_big_nohaplotig	exon	25071394	25071733	100	+	.	Parent=FBgn0043458.1.mrna1;Target=FBgn0043458.1 19 358 +
Chr1	stalkie_big_nohaplotig	exon	25074957	25075663	99	+	.	Parent=FBgn0043458.1.mrna1;Target=FBgn0043458.1 359 1065 +
Chr1	stalkie_big_nohaplotig	exon	25075724	25075801	100	+	.	Parent=FBgn0043458.1.mrna1;Target=FBgn0043458.1 1066 1143 +
Chr1	stalkie_big_nohaplotig	exon	25075867	25075991	100	+	.	Parent=FBgn0043458.1.mrna1;Target=FBgn0043458.1 1144 1268 +
Chr1	stalkie_big_nohaplotig	exon	25076059	25076230	100	+	.	Parent=FBgn0043458.1.mrna1;Target=FBgn0043458.1 1269 1440 +
Chr1	stalkie_big_nohaplotig	exon	25077772	25077933	100	+	.	Parent=FBgn0043458.1.mrna1;Target=FBgn0043458.1 1441 1602 +
Chr1	stalkie_big_nohaplotig	exon	25078021	25078182	100	+	.	Parent=FBgn0043458.1.mrna1;Target=FBgn0043458.1 1603 1764 +
Chr1	stalkie_big_nohaplotig	exon	25078252	25078401	100	+	.	Parent=FBgn0043458.1.mrna1;Target=FBgn0043458.1 1765 1914 +
Chr1	stalkie_big_nohaplotig	exon	25080020	25080265	100	+	.	Parent=FBgn0043458.1.mrna1;Target=FBgn0043458.1 1915 2160 +
Chr1	stalkie_big_nohaplotig	exon	25080334	25080492	100	+	.	Parent=FBgn0043458.1.mrna1;Target=FBgn0043458.1 2161 2319 +
Chr1	stalkie_big_nohaplotig	CDS	25069297	25069311	.	+	0	Parent=FBgn0043458.1.mrna1;Target=FBgn0043458.1 3 18 +
Chr1	stalkie_big_nohaplotig	CDS	25071394	25071416	.	+	0	Parent=FBgn0043458.1.mrna1;Target=FBgn0043458.1 19 41 +
Chr1	stalkie_big_nohaplotig	mRNA	25081132	25081727	.	+	.	ID=comp118008_c0_seq1.mrna1;geneID=comp118008_c0_seq1.path1;Name=comp118008_c0_seq1;Dir=indeterminatecoverage=91.0;identity=100.0;matches=596;mismatches=0;indels=0;unknowns=0;Target=comp118008_c0_seq1 654 59 .;CDS_Target=comp118008_c0_seq1 199 92 .;locus=RLOC_00006601
Chr1	stalkie_big_nohaplotig	exon	25081132	25081727	100	+	.	Parent=comp118008_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	25081165	25081272	.	+	0	Parent=comp118008_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25184232	25184781	.	-	.	ID=comp935764_c0_seq1.mrna1;geneID=comp935764_c0_seq1.path1;Name=comp935764_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.5;matches=547;mismatches=3;indels=0;unknowns=0;Target=comp935764_c0_seq1 550 1 .;CDS_Target=comp935764_c0_seq1 191 78 .;locus=RLOC_00006601
Chr1	stalkie_big_nohaplotig	exon	25184232	25184781	99	-	.	Parent=comp935764_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	25184591	25184704	.	-	0	Parent=comp935764_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25185482	25186905	.	+	.	ID=comp159548_c0_seq1.mrna1;geneID=comp159548_c0_seq1.path1;Name=comp159548_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.9;matches=1353;mismatches=36;indels=36;unknowns=0;Target=comp159548_c0_seq1 1390 1 .;CDS_Target=comp159548_c0_seq1 1021 923 .;locus=RLOC_00006601
Chr1	stalkie_big_nohaplotig	exon	25185482	25186905	94	+	.	Parent=comp159548_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	25186438	25186536	.	+	0	Parent=comp159548_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25307744	25316690	.	+	.	ID=FBgn0053556.1.mrna1;geneID=FBgn0053556.1.path1;Name=FBgn0053556.1;Dir=sensecoverage=100.0;identity=99.7;matches=4937;mismatches=14;indels=2;unknowns=0;Target=FBgn0053556.1 2 13 +;locus=RLOC_00006601
Chr1	stalkie_big_nohaplotig	exon	25307744	25307818	92	+	.	Parent=FBgn0053556.1.mrna1;Target=FBgn0053556.1 1 77 +
Chr1	stalkie_big_nohaplotig	exon	25308343	25308490	100	+	.	Parent=FBgn0053556.1.mrna1;Target=FBgn0053556.1 78 225 +
Chr1	stalkie_big_nohaplotig	exon	25310082	25310983	100	+	.	Parent=FBgn0053556.1.mrna1;Target=FBgn0053556.1 226 1127 +
Chr1	stalkie_big_nohaplotig	exon	25311040	25311228	100	+	.	Parent=FBgn0053556.1.mrna1;Target=FBgn0053556.1 1128 1316 +
Chr1	stalkie_big_nohaplotig	exon	25311296	25311396	100	+	.	Parent=FBgn0053556.1.mrna1;Target=FBgn0053556.1 1317 1417 +
Chr1	stalkie_big_nohaplotig	exon	25311457	25311706	100	+	.	Parent=FBgn0053556.1.mrna1;Target=FBgn0053556.1 1418 1667 +
Chr1	stalkie_big_nohaplotig	exon	25311771	25311897	100	+	.	Parent=FBgn0053556.1.mrna1;Target=FBgn0053556.1 1668 1794 +
Chr1	stalkie_big_nohaplotig	exon	25312950	25313202	98	+	.	Parent=FBgn0053556.1.mrna1;Target=FBgn0053556.1 1795 2047 +
Chr1	stalkie_big_nohaplotig	exon	25313276	25313578	99	+	.	Parent=FBgn0053556.1.mrna1;Target=FBgn0053556.1 2048 2350 +
Chr1	stalkie_big_nohaplotig	exon	25313892	25314099	100	+	.	Parent=FBgn0053556.1.mrna1;Target=FBgn0053556.1 2351 2558 +
Chr1	stalkie_big_nohaplotig	exon	25314166	25314299	100	+	.	Parent=FBgn0053556.1.mrna1;Target=FBgn0053556.1 2559 2692 +
Chr1	stalkie_big_nohaplotig	exon	25314362	25314544	100	+	.	Parent=FBgn0053556.1.mrna1;Target=FBgn0053556.1 2693 2875 +
Chr1	stalkie_big_nohaplotig	exon	25314613	25316690	99	+	.	Parent=FBgn0053556.1.mrna1;Target=FBgn0053556.1 2876 4953 +
Chr1	stalkie_big_nohaplotig	CDS	25307745	25307755	.	+	0	Parent=FBgn0053556.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25317908	25319343	.	-	.	ID=comp162241_c2_seq1.mrna2;geneID=comp162241_c2_seq1.path2;Name=comp162241_c2_seq1;Dir=indeterminatecoverage=95.9;identity=98.8;matches=1423;mismatches=13;indels=4;unknowns=0;Target=comp162241_c2_seq1 1501 62 .;CDS_Target=comp162241_c2_seq1 957 865 .;locus=RLOC_00006601
Chr1	stalkie_big_nohaplotig	exon	25317908	25319343	98	-	.	Parent=comp162241_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	25318452	25318540	.	-	0	Parent=comp162241_c2_seq1.mrna2
Chr1	gffcl	locus	25089282	25089531	.	-	.	ID=RLOC_00006602;geneIDs=comp134350_c0_seq1.path1;transcripts=comp134350_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25089282	25089531	.	-	.	ID=comp134350_c0_seq1.mrna1;geneID=comp134350_c0_seq1.path1;Name=comp134350_c0_seq1;Dir=indeterminatecoverage=94.3;identity=99.6;matches=249;mismatches=1;indels=0;unknowns=0;Target=comp134350_c0_seq1 263 14 .;CDS_Target=comp134350_c0_seq1 92 15 .;locus=RLOC_00006602
Chr1	stalkie_big_nohaplotig	exon	25089282	25089531	99	-	.	Parent=comp134350_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	25089453	25089530	.	-	0	Parent=comp134350_c0_seq1.mrna1
Chr1	gffcl	locus	25161949	25167035	.	-	.	ID=RLOC_00006604;geneIDs=FBgn0036039.1.path1,comp162890_c0_seq1.path1;transcripts=FBgn0036039.1.mrna1,comp162890_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25161949	25166428	.	-	.	ID=FBgn0036039.1.mrna1;geneID=FBgn0036039.1.path1;Name=FBgn0036039.1;Dir=sensecoverage=100.0;identity=99.9;matches=767;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006604
Chr1	stalkie_big_nohaplotig	exon	25161949	25162078	99	-	.	Parent=FBgn0036039.1.mrna1;Target=FBgn0036039.1 639 768 +
Chr1	stalkie_big_nohaplotig	exon	25163903	25164013	100	-	.	Parent=FBgn0036039.1.mrna1;Target=FBgn0036039.1 528 638 +
Chr1	stalkie_big_nohaplotig	exon	25164225	25164445	100	-	.	Parent=FBgn0036039.1.mrna1;Target=FBgn0036039.1 307 527 +
Chr1	stalkie_big_nohaplotig	exon	25164517	25164681	100	-	.	Parent=FBgn0036039.1.mrna1;Target=FBgn0036039.1 142 306 +
Chr1	stalkie_big_nohaplotig	exon	25165908	25166028	100	-	.	Parent=FBgn0036039.1.mrna1;Target=FBgn0036039.1 21 141 +
Chr1	stalkie_big_nohaplotig	exon	25166409	25166428	100	-	.	Parent=FBgn0036039.1.mrna1;Target=FBgn0036039.1 1 20 +
Chr1	stalkie_big_nohaplotig	CDS	25161949	25162078	.	-	1	Parent=FBgn0036039.1.mrna1;Target=FBgn0036039.1 639 768 +
Chr1	stalkie_big_nohaplotig	CDS	25163903	25164013	.	-	1	Parent=FBgn0036039.1.mrna1;Target=FBgn0036039.1 528 638 +
Chr1	stalkie_big_nohaplotig	CDS	25164225	25164445	.	-	0	Parent=FBgn0036039.1.mrna1;Target=FBgn0036039.1 307 527 +
Chr1	stalkie_big_nohaplotig	CDS	25164517	25164681	.	-	0	Parent=FBgn0036039.1.mrna1;Target=FBgn0036039.1 142 306 +
Chr1	stalkie_big_nohaplotig	CDS	25165908	25166028	.	-	1	Parent=FBgn0036039.1.mrna1;Target=FBgn0036039.1 21 141 +
Chr1	stalkie_big_nohaplotig	CDS	25166409	25166428	.	-	0	Parent=FBgn0036039.1.mrna1;Target=FBgn0036039.1 1 20 +
Chr1	stalkie_big_nohaplotig	mRNA	25162158	25167035	.	-	.	ID=comp162890_c0_seq1.mrna1;geneID=comp162890_c0_seq1.path1;Name=comp162890_c0_seq1;Dir=antisensecoverage=100.0;identity=94.2;matches=2914;mismatches=42;indels=137;unknowns=0;locus=RLOC_00006604
Chr1	stalkie_big_nohaplotig	exon	25162158	25164013	90	-	.	Parent=comp162890_c0_seq1.mrna1;Target=comp162890_c0_seq1 1 1925 -
Chr1	stalkie_big_nohaplotig	exon	25164225	25164445	100	-	.	Parent=comp162890_c0_seq1.mrna1;Target=comp162890_c0_seq1 1926 2146 -
Chr1	stalkie_big_nohaplotig	exon	25164517	25164681	100	-	.	Parent=comp162890_c0_seq1.mrna1;Target=comp162890_c0_seq1 2147 2311 -
Chr1	stalkie_big_nohaplotig	exon	25165908	25166028	100	-	.	Parent=comp162890_c0_seq1.mrna1;Target=comp162890_c0_seq1 2312 2432 -
Chr1	stalkie_big_nohaplotig	exon	25166409	25167035	99	-	.	Parent=comp162890_c0_seq1.mrna1;Target=comp162890_c0_seq1 2433 3059 -
Chr1	stalkie_big_nohaplotig	CDS	25163875	25164013	.	-	1	Parent=comp162890_c0_seq1.mrna1;Target=comp162890_c0_seq1 1787 1925 .
Chr1	stalkie_big_nohaplotig	CDS	25164225	25164445	.	-	0	Parent=comp162890_c0_seq1.mrna1;Target=comp162890_c0_seq1 1926 2146 .
Chr1	stalkie_big_nohaplotig	CDS	25164517	25164681	.	-	0	Parent=comp162890_c0_seq1.mrna1;Target=comp162890_c0_seq1 2147 2311 .
Chr1	stalkie_big_nohaplotig	CDS	25165908	25166028	.	-	1	Parent=comp162890_c0_seq1.mrna1;Target=comp162890_c0_seq1 2312 2432 .
Chr1	stalkie_big_nohaplotig	CDS	25166409	25166425	.	-	0	Parent=comp162890_c0_seq1.mrna1;Target=comp162890_c0_seq1 2433 2449 .
Chr1	gffcl	locus	25170363	25171396	.	-	.	ID=RLOC_00006605;geneIDs=ORF2414.path1;transcripts=ORF2414.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25170363	25171396	.	-	.	ID=ORF2414.mrna1;geneID=ORF2414.path1;Name=ORF2414;Dir=sensecoverage=99.9;identity=99.3;matches=857;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006605
Chr1	stalkie_big_nohaplotig	exon	25170363	25170655	100	-	.	Parent=ORF2414.mrna1;Target=ORF2414 572 864 +
Chr1	stalkie_big_nohaplotig	exon	25170705	25170838	99	-	.	Parent=ORF2414.mrna1;Target=ORF2414 438 571 +
Chr1	stalkie_big_nohaplotig	exon	25170909	25171233	98	-	.	Parent=ORF2414.mrna1;Target=ORF2414 113 437 +
Chr1	stalkie_big_nohaplotig	exon	25171286	25171396	99	-	.	Parent=ORF2414.mrna1;Target=ORF2414 2 112 +
Chr1	stalkie_big_nohaplotig	CDS	25170363	25170655	.	-	2	Parent=ORF2414.mrna1;Target=ORF2414 572 864 +
Chr1	stalkie_big_nohaplotig	CDS	25170705	25170838	.	-	1	Parent=ORF2414.mrna1;Target=ORF2414 438 571 +
Chr1	stalkie_big_nohaplotig	CDS	25170909	25171233	.	-	2	Parent=ORF2414.mrna1;Target=ORF2414 113 437 +
Chr1	stalkie_big_nohaplotig	CDS	25171286	25171394	.	-	0	Parent=ORF2414.mrna1;Target=ORF2414 4 112 +
Chr1	gffcl	locus	25174498	25192940	.	-	.	ID=RLOC_00006606;geneIDs=FBgn0035227.1.path1;transcripts=FBgn0035227.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25174498	25192940	.	-	.	ID=FBgn0035227.1.mrna1;geneID=FBgn0035227.1.path1;Name=FBgn0035227.1;Dir=sensecoverage=100.0;identity=99.5;matches=4622;mismatches=25;indels=0;unknowns=0;locus=RLOC_00006606
Chr1	stalkie_big_nohaplotig	exon	25174498	25174746	99	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 4399 4647 +
Chr1	stalkie_big_nohaplotig	exon	25174806	25174908	100	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 4296 4398 +
Chr1	stalkie_big_nohaplotig	exon	25174978	25175033	98	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 4240 4295 +
Chr1	stalkie_big_nohaplotig	exon	25175106	25175218	96	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 4127 4239 +
Chr1	stalkie_big_nohaplotig	exon	25175270	25175438	98	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 3958 4126 +
Chr1	stalkie_big_nohaplotig	exon	25175505	25175668	99	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 3794 3957 +
Chr1	stalkie_big_nohaplotig	exon	25176684	25176851	100	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 3626 3793 +
Chr1	stalkie_big_nohaplotig	exon	25177418	25177515	100	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 3528 3625 +
Chr1	stalkie_big_nohaplotig	exon	25177592	25177798	100	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 3321 3527 +
Chr1	stalkie_big_nohaplotig	exon	25177863	25177976	99	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 3207 3320 +
Chr1	stalkie_big_nohaplotig	exon	25180860	25180924	98	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 3142 3206 +
Chr1	stalkie_big_nohaplotig	exon	25181257	25181334	100	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 3064 3141 +
Chr1	stalkie_big_nohaplotig	exon	25181804	25182007	99	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 2860 3063 +
Chr1	stalkie_big_nohaplotig	exon	25183371	25183545	98	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 2685 2859 +
Chr1	stalkie_big_nohaplotig	exon	25183625	25184048	100	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 2261 2684 +
Chr1	stalkie_big_nohaplotig	exon	25187239	25187340	100	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 2159 2260 +
Chr1	stalkie_big_nohaplotig	exon	25189676	25189810	100	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 2024 2158 +
Chr1	stalkie_big_nohaplotig	exon	25189888	25190077	99	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 1834 2023 +
Chr1	stalkie_big_nohaplotig	exon	25190137	25190313	100	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 1657 1833 +
Chr1	stalkie_big_nohaplotig	exon	25190377	25190548	98	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 1485 1656 +
Chr1	stalkie_big_nohaplotig	exon	25191157	25191272	99	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 1369 1484 +
Chr1	stalkie_big_nohaplotig	exon	25191326	25191568	97	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 1126 1368 +
Chr1	stalkie_big_nohaplotig	exon	25191622	25192341	99	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 406 1125 +
Chr1	stalkie_big_nohaplotig	exon	25192406	25192585	100	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 226 405 +
Chr1	stalkie_big_nohaplotig	exon	25192652	25192785	100	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 92 225 +
Chr1	stalkie_big_nohaplotig	exon	25192850	25192940	100	-	.	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 1 91 +
Chr1	stalkie_big_nohaplotig	CDS	25174498	25174746	.	-	0	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 4399 4647 +
Chr1	stalkie_big_nohaplotig	CDS	25174806	25174908	.	-	1	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 4296 4398 +
Chr1	stalkie_big_nohaplotig	CDS	25174978	25175033	.	-	0	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 4240 4295 +
Chr1	stalkie_big_nohaplotig	CDS	25175106	25175218	.	-	2	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 4127 4239 +
Chr1	stalkie_big_nohaplotig	CDS	25175270	25175438	.	-	0	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 3958 4126 +
Chr1	stalkie_big_nohaplotig	CDS	25175505	25175668	.	-	2	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 3794 3957 +
Chr1	stalkie_big_nohaplotig	CDS	25176684	25176851	.	-	2	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 3626 3793 +
Chr1	stalkie_big_nohaplotig	CDS	25177418	25177515	.	-	1	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 3528 3625 +
Chr1	stalkie_big_nohaplotig	CDS	25177592	25177798	.	-	1	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 3321 3527 +
Chr1	stalkie_big_nohaplotig	CDS	25177863	25177976	.	-	1	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 3207 3320 +
Chr1	stalkie_big_nohaplotig	CDS	25180860	25180924	.	-	0	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 3142 3206 +
Chr1	stalkie_big_nohaplotig	CDS	25181257	25181334	.	-	0	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 3064 3141 +
Chr1	stalkie_big_nohaplotig	CDS	25181804	25182007	.	-	0	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 2860 3063 +
Chr1	stalkie_big_nohaplotig	CDS	25183371	25183545	.	-	1	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 2685 2859 +
Chr1	stalkie_big_nohaplotig	CDS	25183625	25184048	.	-	2	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 2261 2684 +
Chr1	stalkie_big_nohaplotig	CDS	25187239	25187340	.	-	2	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 2159 2260 +
Chr1	stalkie_big_nohaplotig	CDS	25189676	25189810	.	-	2	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 2024 2158 +
Chr1	stalkie_big_nohaplotig	CDS	25189888	25190077	.	-	0	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 1834 2023 +
Chr1	stalkie_big_nohaplotig	CDS	25190137	25190313	.	-	0	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 1657 1833 +
Chr1	stalkie_big_nohaplotig	CDS	25190377	25190548	.	-	1	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 1485 1656 +
Chr1	stalkie_big_nohaplotig	CDS	25191157	25191272	.	-	0	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 1369 1484 +
Chr1	stalkie_big_nohaplotig	CDS	25191326	25191568	.	-	0	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 1126 1368 +
Chr1	stalkie_big_nohaplotig	CDS	25191622	25192341	.	-	0	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 406 1125 +
Chr1	stalkie_big_nohaplotig	CDS	25192406	25192585	.	-	0	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 226 405 +
Chr1	stalkie_big_nohaplotig	CDS	25192652	25192785	.	-	2	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 92 225 +
Chr1	stalkie_big_nohaplotig	CDS	25192850	25192940	.	-	0	Parent=FBgn0035227.1.mrna1;Target=FBgn0035227.1 1 91 +
Chr1	gffcl	locus	25195349	25217841	.	-	.	ID=RLOC_00006607;geneIDs=FBgn0261243.1.path1,comp144393_c0_seq1.path1;transcripts=FBgn0261243.1.mrna1,comp144393_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25195349	25217841	.	-	.	ID=FBgn0261243.1.mrna1;geneID=FBgn0261243.1.path1;Name=FBgn0261243.1;Dir=sensecoverage=100.0;identity=99.9;matches=3032;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006607
Chr1	stalkie_big_nohaplotig	exon	25195349	25195555	100	-	.	Parent=FBgn0261243.1.mrna1;Target=FBgn0261243.1 2830 3036 +
Chr1	stalkie_big_nohaplotig	exon	25196465	25196587	100	-	.	Parent=FBgn0261243.1.mrna1;Target=FBgn0261243.1 2707 2829 +
Chr1	stalkie_big_nohaplotig	exon	25196652	25196871	100	-	.	Parent=FBgn0261243.1.mrna1;Target=FBgn0261243.1 2487 2706 +
Chr1	stalkie_big_nohaplotig	exon	25196945	25197222	100	-	.	Parent=FBgn0261243.1.mrna1;Target=FBgn0261243.1 2209 2486 +
Chr1	stalkie_big_nohaplotig	exon	25197282	25198108	99	-	.	Parent=FBgn0261243.1.mrna1;Target=FBgn0261243.1 1382 2208 +
Chr1	stalkie_big_nohaplotig	exon	25198196	25199012	99	-	.	Parent=FBgn0261243.1.mrna1;Target=FBgn0261243.1 565 1381 +
Chr1	stalkie_big_nohaplotig	exon	25216510	25217018	100	-	.	Parent=FBgn0261243.1.mrna1;Target=FBgn0261243.1 56 564 +
Chr1	stalkie_big_nohaplotig	exon	25217787	25217841	100	-	.	Parent=FBgn0261243.1.mrna1;Target=FBgn0261243.1 1 55 +
Chr1	stalkie_big_nohaplotig	CDS	25195349	25195555	.	-	0	Parent=FBgn0261243.1.mrna1;Target=FBgn0261243.1 2830 3036 +
Chr1	stalkie_big_nohaplotig	CDS	25196465	25196587	.	-	0	Parent=FBgn0261243.1.mrna1;Target=FBgn0261243.1 2707 2829 +
Chr1	stalkie_big_nohaplotig	CDS	25196652	25196871	.	-	1	Parent=FBgn0261243.1.mrna1;Target=FBgn0261243.1 2487 2706 +
Chr1	stalkie_big_nohaplotig	CDS	25196945	25197222	.	-	0	Parent=FBgn0261243.1.mrna1;Target=FBgn0261243.1 2209 2486 +
Chr1	stalkie_big_nohaplotig	CDS	25197282	25198108	.	-	2	Parent=FBgn0261243.1.mrna1;Target=FBgn0261243.1 1382 2208 +
Chr1	stalkie_big_nohaplotig	CDS	25198196	25199012	.	-	0	Parent=FBgn0261243.1.mrna1;Target=FBgn0261243.1 565 1381 +
Chr1	stalkie_big_nohaplotig	CDS	25216510	25217018	.	-	2	Parent=FBgn0261243.1.mrna1;Target=FBgn0261243.1 56 564 +
Chr1	stalkie_big_nohaplotig	CDS	25217787	25217841	.	-	0	Parent=FBgn0261243.1.mrna1;Target=FBgn0261243.1 1 55 +
Chr1	stalkie_big_nohaplotig	mRNA	25216995	25217794	.	-	.	ID=comp144393_c0_seq1.mrna1;geneID=comp144393_c0_seq1.path1;Name=comp144393_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=334;mismatches=1;indels=0;unknowns=0;Target=comp144393_c0_seq1 2 118 +;locus=RLOC_00006607
Chr1	stalkie_big_nohaplotig	exon	25216995	25217018	100	-	.	Parent=comp144393_c0_seq1.mrna1;Target=comp144393_c0_seq1 312 335 +
Chr1	stalkie_big_nohaplotig	exon	25217368	25217433	100	-	.	Parent=comp144393_c0_seq1.mrna1;Target=comp144393_c0_seq1 246 311 +
Chr1	stalkie_big_nohaplotig	exon	25217550	25217794	99	-	.	Parent=comp144393_c0_seq1.mrna1;Target=comp144393_c0_seq1 1 245 +
Chr1	stalkie_big_nohaplotig	CDS	25217677	25217793	.	-	0	Parent=comp144393_c0_seq1.mrna1
Chr1	gffcl	locus	25208679	25209160	.	-	.	ID=RLOC_00006608;geneIDs=comp152975_c0_seq1.path4;transcripts=comp152975_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	25208679	25209160	.	-	.	ID=comp152975_c0_seq1.mrna4;geneID=comp152975_c0_seq1.path4;Name=comp152975_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=477;mismatches=5;indels=0;unknowns=0;Target=comp152975_c0_seq1 482 1 .;CDS_Target=comp152975_c0_seq1 185 63 .;locus=RLOC_00006608
Chr1	stalkie_big_nohaplotig	exon	25208679	25209160	98	-	.	Parent=comp152975_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	25208976	25209098	.	-	0	Parent=comp152975_c0_seq1.mrna4
Chr1	gffcl	locus	25218021	25219125	.	+	.	ID=RLOC_00006609;geneIDs=FBgn0019644.1.path1;transcripts=FBgn0019644.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25218021	25219125	.	+	.	ID=FBgn0019644.1.mrna1;geneID=FBgn0019644.1.path1;Name=FBgn0019644.1;Dir=sensecoverage=100.0;identity=99.7;matches=763;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006609
Chr1	stalkie_big_nohaplotig	exon	25218021	25218066	100	+	.	Parent=FBgn0019644.1.mrna1;Target=FBgn0019644.1 1 46 +
Chr1	stalkie_big_nohaplotig	exon	25218280	25218632	99	+	.	Parent=FBgn0019644.1.mrna1;Target=FBgn0019644.1 47 399 +
Chr1	stalkie_big_nohaplotig	exon	25218692	25218880	100	+	.	Parent=FBgn0019644.1.mrna1;Target=FBgn0019644.1 400 588 +
Chr1	stalkie_big_nohaplotig	exon	25218949	25219125	99	+	.	Parent=FBgn0019644.1.mrna1;Target=FBgn0019644.1 589 765 +
Chr1	stalkie_big_nohaplotig	CDS	25218021	25218066	.	+	0	Parent=FBgn0019644.1.mrna1;Target=FBgn0019644.1 1 46 +
Chr1	stalkie_big_nohaplotig	CDS	25218280	25218632	.	+	2	Parent=FBgn0019644.1.mrna1;Target=FBgn0019644.1 47 399 +
Chr1	stalkie_big_nohaplotig	CDS	25218692	25218880	.	+	0	Parent=FBgn0019644.1.mrna1;Target=FBgn0019644.1 400 588 +
Chr1	stalkie_big_nohaplotig	CDS	25218949	25219125	.	+	0	Parent=FBgn0019644.1.mrna1;Target=FBgn0019644.1 589 765 +
Chr1	gffcl	locus	25319972	25324106	.	-	.	ID=RLOC_00006611;geneIDs=FBgn0002775.1.path1;transcripts=FBgn0002775.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25319972	25324106	.	-	.	ID=FBgn0002775.1.mrna1;geneID=FBgn0002775.1.path1;Name=FBgn0002775.1;Dir=sensecoverage=100.0;identity=99.5;matches=2025;mismatches=8;indels=3;unknowns=0;locus=RLOC_00006611
Chr1	stalkie_big_nohaplotig	exon	25319972	25320532	99	-	.	Parent=FBgn0002775.1.mrna1;Target=FBgn0002775.1 1473 2033 +
Chr1	stalkie_big_nohaplotig	exon	25322161	25322245	97	-	.	Parent=FBgn0002775.1.mrna1;Target=FBgn0002775.1 1388 1472 +
Chr1	stalkie_big_nohaplotig	exon	25322301	25322878	99	-	.	Parent=FBgn0002775.1.mrna1;Target=FBgn0002775.1 810 1387 +
Chr1	stalkie_big_nohaplotig	exon	25322946	25323234	100	-	.	Parent=FBgn0002775.1.mrna1;Target=FBgn0002775.1 521 809 +
Chr1	stalkie_big_nohaplotig	exon	25323376	25323605	98	-	.	Parent=FBgn0002775.1.mrna1;Target=FBgn0002775.1 294 520 +
Chr1	stalkie_big_nohaplotig	exon	25323688	25323866	100	-	.	Parent=FBgn0002775.1.mrna1;Target=FBgn0002775.1 115 293 +
Chr1	stalkie_big_nohaplotig	exon	25323993	25324106	100	-	.	Parent=FBgn0002775.1.mrna1;Target=FBgn0002775.1 1 114 +
Chr1	stalkie_big_nohaplotig	CDS	25319974	25320532	.	-	1	Parent=FBgn0002775.1.mrna1;Target=FBgn0002775.1 1473 2031 +
Chr1	stalkie_big_nohaplotig	CDS	25322161	25322245	.	-	2	Parent=FBgn0002775.1.mrna1;Target=FBgn0002775.1 1388 1472 +
Chr1	stalkie_big_nohaplotig	CDS	25322301	25322878	.	-	1	Parent=FBgn0002775.1.mrna1;Target=FBgn0002775.1 810 1387 +
Chr1	stalkie_big_nohaplotig	CDS	25322946	25323234	.	-	2	Parent=FBgn0002775.1.mrna1;Target=FBgn0002775.1 521 809 +
Chr1	stalkie_big_nohaplotig	CDS	25323376	25323605	.	-	1	Parent=FBgn0002775.1.mrna1;Target=FBgn0002775.1 294 520 +
Chr1	stalkie_big_nohaplotig	CDS	25323688	25323866	.	-	0	Parent=FBgn0002775.1.mrna1;Target=FBgn0002775.1 115 293 +
Chr1	stalkie_big_nohaplotig	CDS	25323993	25324106	.	-	0	Parent=FBgn0002775.1.mrna1;Target=FBgn0002775.1 1 114 +
Chr1	gffcl	locus	25325253	25328332	.	+	.	ID=RLOC_00006612;geneIDs=FBgn0001233.1.path1,comp159529_c0_seq1.path1;transcripts=FBgn0001233.1.mrna1,comp159529_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25325253	25328332	.	+	.	ID=FBgn0001233.1.mrna1;geneID=FBgn0001233.1.path1;Name=FBgn0001233.1;Dir=sensecoverage=100.0;identity=100.0;matches=2174;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006612
Chr1	stalkie_big_nohaplotig	exon	25325253	25325279	100	+	.	Parent=FBgn0001233.1.mrna1;Target=FBgn0001233.1 1 27 +
Chr1	stalkie_big_nohaplotig	exon	25326185	25328332	99	+	.	Parent=FBgn0001233.1.mrna1;Target=FBgn0001233.1 28 2175 +
Chr1	stalkie_big_nohaplotig	CDS	25325253	25325279	.	+	0	Parent=FBgn0001233.1.mrna1;Target=FBgn0001233.1 1 27 +
Chr1	stalkie_big_nohaplotig	CDS	25326185	25328332	.	+	0	Parent=FBgn0001233.1.mrna1;Target=FBgn0001233.1 28 2175 +
Chr1	stalkie_big_nohaplotig	mRNA	25325256	25326204	.	+	.	ID=comp159529_c0_seq1.mrna1;geneID=comp159529_c0_seq1.path1;Name=comp159529_c0_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=851;mismatches=4;indels=2;unknowns=0;Target=comp159529_c0_seq1 684 857 .;locus=RLOC_00006612
Chr1	stalkie_big_nohaplotig	exon	25325256	25326090	99	+	.	Parent=comp159529_c0_seq1.mrna1;Target=comp159529_c0_seq1 21 857 -
Chr1	stalkie_big_nohaplotig	exon	25326185	25326204	100	+	.	Parent=comp159529_c0_seq1.mrna1;Target=comp159529_c0_seq1 1 20 -
Chr1	stalkie_big_nohaplotig	CDS	25325256	25325429	.	+	0	Parent=comp159529_c0_seq1.mrna1
Chr1	gffcl	locus	25329960	25330409	.	-	.	ID=RLOC_00006613;geneIDs=FBgn0035415.1.path1;transcripts=FBgn0035415.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25329960	25330409	.	-	.	ID=FBgn0035415.1.mrna1;geneID=FBgn0035415.1.path1;Name=FBgn0035415.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=448;mismatches=2;indels=0;unknowns=0;Target=FBgn0035415.1 450 1 .;locus=RLOC_00006613
Chr1	stalkie_big_nohaplotig	exon	25329960	25330409	99	-	.	Parent=FBgn0035415.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	25329960	25330409	.	-	0	Parent=FBgn0035415.1.mrna1
Chr1	gffcl	locus	25331603	25332256	.	+	.	ID=RLOC_00006614;geneIDs=FBgn0031909.1.path1;transcripts=FBgn0031909.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25331603	25332256	.	+	.	ID=FBgn0031909.1.mrna1;geneID=FBgn0031909.1.path1;Name=FBgn0031909.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=652;mismatches=2;indels=0;unknowns=0;Target=FBgn0031909.1 654 1 .;locus=RLOC_00006614
Chr1	stalkie_big_nohaplotig	exon	25331603	25332256	99	+	.	Parent=FBgn0031909.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	25331603	25332256	.	+	0	Parent=FBgn0031909.1.mrna1
Chr1	gffcl	locus	25337756	25340506	.	-	.	ID=RLOC_00006615;geneIDs=FBgn0047135.1.path1;transcripts=FBgn0047135.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25337756	25340506	.	-	.	ID=FBgn0047135.1.mrna1;geneID=FBgn0047135.1.path1;Name=FBgn0047135.1;Dir=sensecoverage=100.0;identity=100.0;matches=216;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006615
Chr1	stalkie_big_nohaplotig	exon	25337756	25337863	100	-	.	Parent=FBgn0047135.1.mrna1;Target=FBgn0047135.1 109 216 +
Chr1	stalkie_big_nohaplotig	exon	25340399	25340506	100	-	.	Parent=FBgn0047135.1.mrna1;Target=FBgn0047135.1 1 108 +
Chr1	stalkie_big_nohaplotig	CDS	25337756	25337863	.	-	0	Parent=FBgn0047135.1.mrna1;Target=FBgn0047135.1 109 216 +
Chr1	stalkie_big_nohaplotig	CDS	25340399	25340506	.	-	0	Parent=FBgn0047135.1.mrna1;Target=FBgn0047135.1 1 108 +
Chr1	gffcl	locus	25342702	25343806	.	-	.	ID=RLOC_00006616;geneIDs=FBgn0019644.1.path2;transcripts=FBgn0019644.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	25342702	25343806	.	-	.	ID=FBgn0019644.1.mrna2;geneID=FBgn0019644.1.path2;Name=FBgn0019644.1;Dir=sensecoverage=100.0;identity=99.7;matches=763;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006616
Chr1	stalkie_big_nohaplotig	exon	25342702	25342878	99	-	.	Parent=FBgn0019644.1.mrna2;Target=FBgn0019644.1 589 765 +
Chr1	stalkie_big_nohaplotig	exon	25342947	25343135	100	-	.	Parent=FBgn0019644.1.mrna2;Target=FBgn0019644.1 400 588 +
Chr1	stalkie_big_nohaplotig	exon	25343195	25343547	99	-	.	Parent=FBgn0019644.1.mrna2;Target=FBgn0019644.1 47 399 +
Chr1	stalkie_big_nohaplotig	exon	25343761	25343806	100	-	.	Parent=FBgn0019644.1.mrna2;Target=FBgn0019644.1 1 46 +
Chr1	stalkie_big_nohaplotig	CDS	25342702	25342878	.	-	0	Parent=FBgn0019644.1.mrna2;Target=FBgn0019644.1 589 765 +
Chr1	stalkie_big_nohaplotig	CDS	25342947	25343135	.	-	0	Parent=FBgn0019644.1.mrna2;Target=FBgn0019644.1 400 588 +
Chr1	stalkie_big_nohaplotig	CDS	25343195	25343547	.	-	2	Parent=FBgn0019644.1.mrna2;Target=FBgn0019644.1 47 399 +
Chr1	stalkie_big_nohaplotig	CDS	25343761	25343806	.	-	0	Parent=FBgn0019644.1.mrna2;Target=FBgn0019644.1 1 46 +
Chr1	gffcl	locus	25344033	25344832	.	+	.	ID=RLOC_00006617;geneIDs=comp144393_c0_seq1.path2;transcripts=comp144393_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	25344033	25344832	.	+	.	ID=comp144393_c0_seq1.mrna2;geneID=comp144393_c0_seq1.path2;Name=comp144393_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=334;mismatches=1;indels=0;unknowns=0;Target=comp144393_c0_seq1 2 118 +;locus=RLOC_00006617
Chr1	stalkie_big_nohaplotig	exon	25344033	25344277	99	+	.	Parent=comp144393_c0_seq1.mrna2;Target=comp144393_c0_seq1 1 245 +
Chr1	stalkie_big_nohaplotig	exon	25344394	25344459	100	+	.	Parent=comp144393_c0_seq1.mrna2;Target=comp144393_c0_seq1 246 311 +
Chr1	stalkie_big_nohaplotig	exon	25344809	25344832	100	+	.	Parent=comp144393_c0_seq1.mrna2;Target=comp144393_c0_seq1 312 335 +
Chr1	stalkie_big_nohaplotig	CDS	25344034	25344150	.	+	0	Parent=comp144393_c0_seq1.mrna2
Chr1	gffcl	locus	25412687	25413085	.	+	.	ID=RLOC_00006618;geneIDs=FBgn0004635.2.path1;transcripts=FBgn0004635.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25412687	25413085	.	+	.	ID=FBgn0004635.2.mrna1;geneID=FBgn0004635.2.path1;Name=FBgn0004635.2;Dir=indeterminatecoverage=34.8;identity=99.7;matches=398;mismatches=1;indels=0;unknowns=0;Target=FBgn0004635.2 399 1 .;locus=RLOC_00006618
Chr1	stalkie_big_nohaplotig	exon	25412687	25413085	99	+	.	Parent=FBgn0004635.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	25412687	25413085	.	+	0	Parent=FBgn0004635.2.mrna1
Chr1	gffcl	locus	25421111	25422145	.	+	.	ID=RLOC_00006619;geneIDs=comp158326_c0_seq1.path1;transcripts=comp158326_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25421111	25422145	.	+	.	ID=comp158326_c0_seq1.mrna1;geneID=comp158326_c0_seq1.path1;Name=comp158326_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.5;matches=973;mismatches=61;indels=7;unknowns=0;Target=comp158326_c0_seq1 1040 1 .;CDS_Target=comp158326_c0_seq1 16 2 .;locus=RLOC_00006619
Chr1	stalkie_big_nohaplotig	exon	25421111	25422145	93	+	.	Parent=comp158326_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	25421112	25421126	.	+	0	Parent=comp158326_c0_seq1.mrna1
Chr1	gffcl	locus	25425281	26613288	.	+	.	ID=RLOC_00006620;geneIDs=comp58843_c0_seq1.path1;transcripts=comp58843_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25425281	26613288	.	+	.	ID=comp58843_c0_seq1.mrna1;geneID=comp58843_c0_seq1.path1;Name=comp58843_c0_seq1;Dir=indeterminatecoverage=86.7;identity=97.1;matches=298;mismatches=3;indels=6;unknowns=0;locus=RLOC_00006620
Chr1	stalkie_big_nohaplotig	exon	25425281	25425518	98	+	.	Parent=comp58843_c0_seq1.mrna1;Target=comp58843_c0_seq1 237 1 .
Chr1	stalkie_big_nohaplotig	exon	26579540	26579541	100	+	.	Parent=comp58843_c0_seq1.mrna1;Target=comp58843_c0_seq1 239 238 .
Chr1	stalkie_big_nohaplotig	exon	26584136	26584138	100	+	.	Parent=comp58843_c0_seq1.mrna1;Target=comp58843_c0_seq1 242 240 .
Chr1	stalkie_big_nohaplotig	exon	26592304	26592306	100	+	.	Parent=comp58843_c0_seq1.mrna1;Target=comp58843_c0_seq1 245 243 .
Chr1	stalkie_big_nohaplotig	exon	26595576	26595583	100	+	.	Parent=comp58843_c0_seq1.mrna1;Target=comp58843_c0_seq1 253 246 .
Chr1	stalkie_big_nohaplotig	exon	26599899	26599909	100	+	.	Parent=comp58843_c0_seq1.mrna1;Target=comp58843_c0_seq1 264 254 .
Chr1	stalkie_big_nohaplotig	exon	26601882	26601897	68	+	.	Parent=comp58843_c0_seq1.mrna1;Target=comp58843_c0_seq1 275 265 .
Chr1	stalkie_big_nohaplotig	exon	26604678	26604681	100	+	.	Parent=comp58843_c0_seq1.mrna1;Target=comp58843_c0_seq1 279 276 .
Chr1	stalkie_big_nohaplotig	exon	26611913	26611919	100	+	.	Parent=comp58843_c0_seq1.mrna1;Target=comp58843_c0_seq1 286 280 .
Chr1	stalkie_big_nohaplotig	exon	26612305	26612308	100	+	.	Parent=comp58843_c0_seq1.mrna1;Target=comp58843_c0_seq1 290 287 .
Chr1	stalkie_big_nohaplotig	exon	26613074	26613076	100	+	.	Parent=comp58843_c0_seq1.mrna1;Target=comp58843_c0_seq1 293 291 .
Chr1	stalkie_big_nohaplotig	exon	26613281	26613288	100	+	.	Parent=comp58843_c0_seq1.mrna1;Target=comp58843_c0_seq1 301 294 .
Chr1	stalkie_big_nohaplotig	CDS	25425447	25425518	.	+	0	Parent=comp58843_c0_seq1.mrna1;Target=comp58843_c0_seq1 237 166 .
Chr1	stalkie_big_nohaplotig	CDS	26579540	26579541	.	+	0	Parent=comp58843_c0_seq1.mrna1;Target=comp58843_c0_seq1 239 238 .
Chr1	gffcl	locus	25426736	25427017	.	+	.	ID=RLOC_00006621;geneIDs=comp150273_c0_seq1.path1;transcripts=comp150273_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25426736	25427017	.	+	.	ID=comp150273_c0_seq1.mrna1;geneID=comp150273_c0_seq1.path1;Name=comp150273_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.5;matches=274;mismatches=6;indels=7;unknowns=0;Target=comp150273_c0_seq1 285 1 .;CDS_Target=comp150273_c0_seq1 81 1 .;locus=RLOC_00006621
Chr1	stalkie_big_nohaplotig	exon	25426736	25427017	95	+	.	Parent=comp150273_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	25426736	25426816	.	+	0	Parent=comp150273_c0_seq1.mrna1
Chr1	gffcl	locus	25427248	25427981	.	+	.	ID=RLOC_00006622;geneIDs=comp162093_c1_seq1.path1;transcripts=comp162093_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25427248	25427981	.	+	.	ID=comp162093_c1_seq1.mrna1;geneID=comp162093_c1_seq1.path1;Name=comp162093_c1_seq1;Dir=indeterminatecoverage=96.2;identity=93.3;matches=693;mismatches=41;indels=9;unknowns=0;Target=comp162093_c1_seq1 743 1 .;CDS_Target=comp162093_c1_seq1 455 372 .;locus=RLOC_00006622
Chr1	stalkie_big_nohaplotig	exon	25427248	25427981	93	+	.	Parent=comp162093_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	25427619	25427702	.	+	0	Parent=comp162093_c1_seq1.mrna1
Chr1	gffcl	locus	25696888	25699514	.	-	.	ID=RLOC_00006625;geneIDs=comp163168_c0_seq1.path3;transcripts=comp163168_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	25696888	25699514	.	-	.	ID=comp163168_c0_seq1.mrna3;geneID=comp163168_c0_seq1.path3;Name=comp163168_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=2313;mismatches=14;indels=3;unknowns=0;Target=comp163168_c0_seq1 1091 2008 +;locus=RLOC_00006625
Chr1	stalkie_big_nohaplotig	exon	25696888	25698746	99	-	.	Parent=comp163168_c0_seq1.mrna3;Target=comp163168_c0_seq1 469 2330 +
Chr1	stalkie_big_nohaplotig	exon	25698805	25698837	100	-	.	Parent=comp163168_c0_seq1.mrna3;Target=comp163168_c0_seq1 436 468 +
Chr1	stalkie_big_nohaplotig	exon	25698957	25699159	99	-	.	Parent=comp163168_c0_seq1.mrna3;Target=comp163168_c0_seq1 233 435 +
Chr1	stalkie_big_nohaplotig	exon	25699283	25699514	98	-	.	Parent=comp163168_c0_seq1.mrna3;Target=comp163168_c0_seq1 1 232 +
Chr1	stalkie_big_nohaplotig	CDS	25697210	25698126	.	-	0	Parent=comp163168_c0_seq1.mrna3
Chr1	gffcl	locus	25796962	25797485	.	+	.	ID=RLOC_00006627;geneIDs=comp157682_c0_seq1.path1;transcripts=comp157682_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25796962	25797485	.	+	.	ID=comp157682_c0_seq1.mrna1;geneID=comp157682_c0_seq1.path1;Name=comp157682_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.5;matches=511;mismatches=13;indels=0;unknowns=0;Target=comp157682_c0_seq1 525 2 .;CDS_Target=comp157682_c0_seq1 413 291 .;locus=RLOC_00006627
Chr1	stalkie_big_nohaplotig	exon	25796962	25797485	97	+	.	Parent=comp157682_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	25797251	25797373	.	+	0	Parent=comp157682_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25880353	26460156	.	-	.	ID=comp162502_c0_seq1.mrna1;geneID=comp162502_c0_seq1.path1;Name=comp162502_c0_seq1;Dir=indeterminatecoverage=93.2;identity=94.6;matches=2883;mismatches=61;indels=104;unknowns=0;Target=comp162502_c0_seq1 1983 1735 .;locus=RLOC_00006628
Chr1	stalkie_big_nohaplotig	exon	25880353	25880361	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3370 3362 .
Chr1	stalkie_big_nohaplotig	exon	25893615	25893619	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3361 3357 .
Chr1	stalkie_big_nohaplotig	exon	25895361	25895363	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3356 3354 .
Chr1	stalkie_big_nohaplotig	exon	25896854	25896862	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3295 3287 .
Chr1	stalkie_big_nohaplotig	exon	25903598	25903604	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3286 3280 .
Chr1	stalkie_big_nohaplotig	exon	25906519	25906527	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3279 3271 .
Chr1	stalkie_big_nohaplotig	exon	25922740	25922748	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3270 3262 .
Chr1	stalkie_big_nohaplotig	exon	25928257	25928268	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3231 3220 .
Chr1	stalkie_big_nohaplotig	exon	25931135	25931137	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3219 3217 .
Chr1	stalkie_big_nohaplotig	exon	25935623	25935627	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3216 3212 .
Chr1	stalkie_big_nohaplotig	exon	25940920	25940928	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3211 3203 .
Chr1	stalkie_big_nohaplotig	exon	25943309	25943315	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3202 3196 .
Chr1	stalkie_big_nohaplotig	exon	25956144	25956149	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3195 3190 .
Chr1	stalkie_big_nohaplotig	exon	25961625	25961626	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3189 3188 .
Chr1	stalkie_big_nohaplotig	exon	25967547	25967550	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3187 3184 .
Chr1	stalkie_big_nohaplotig	exon	25980881	25980885	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3183 3179 .
Chr1	stalkie_big_nohaplotig	exon	25987478	25987483	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3178 3173 .
Chr1	stalkie_big_nohaplotig	exon	25993475	25993477	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3172 3170 .
Chr1	stalkie_big_nohaplotig	exon	25997132	25997145	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3162 3149 .
Chr1	stalkie_big_nohaplotig	exon	25997442	25997451	40	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3148 3145 .
Chr1	stalkie_big_nohaplotig	exon	26003876	26003877	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3144 3143 .
Chr1	stalkie_big_nohaplotig	exon	26006209	26006215	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3142 3136 .
Chr1	stalkie_big_nohaplotig	exon	26012464	26012470	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3135 3129 .
Chr1	stalkie_big_nohaplotig	exon	26018074	26018076	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3128 3126 .
Chr1	stalkie_big_nohaplotig	exon	26019161	26019234	41	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3117 3078 .
Chr1	stalkie_big_nohaplotig	exon	26042003	26042016	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3047 3034 .
Chr1	stalkie_big_nohaplotig	exon	26047754	26047761	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 3016 3009 .
Chr1	stalkie_big_nohaplotig	exon	26053568	26053577	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2975 2966 .
Chr1	stalkie_big_nohaplotig	exon	26055543	26055546	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2965 2962 .
Chr1	stalkie_big_nohaplotig	exon	26062430	26062432	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2961 2959 .
Chr1	stalkie_big_nohaplotig	exon	26062458	26062469	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2917 2906 .
Chr1	stalkie_big_nohaplotig	exon	26063108	26063116	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2905 2897 .
Chr1	stalkie_big_nohaplotig	exon	26066150	26066153	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2896 2893 .
Chr1	stalkie_big_nohaplotig	exon	26076460	26076463	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2892 2889 .
Chr1	stalkie_big_nohaplotig	exon	26078732	26078741	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2876 2867 .
Chr1	stalkie_big_nohaplotig	exon	26086085	26086086	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2866 2865 .
Chr1	stalkie_big_nohaplotig	exon	26092777	26092782	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2864 2859 .
Chr1	stalkie_big_nohaplotig	exon	26097463	26097464	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2858 2857 .
Chr1	stalkie_big_nohaplotig	exon	26112286	26112290	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2856 2852 .
Chr1	stalkie_big_nohaplotig	exon	26113025	26113061	13	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2851 2847 .
Chr1	stalkie_big_nohaplotig	exon	26119775	26119778	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2846 2843 .
Chr1	stalkie_big_nohaplotig	exon	26119937	26119947	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2835 2825 .
Chr1	stalkie_big_nohaplotig	exon	26120183	26120189	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2824 2818 .
Chr1	stalkie_big_nohaplotig	exon	26127581	26127582	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2817 2816 .
Chr1	stalkie_big_nohaplotig	exon	26132071	26132081	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2789 2779 .
Chr1	stalkie_big_nohaplotig	exon	26135069	26135074	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2778 2773 .
Chr1	stalkie_big_nohaplotig	exon	26136753	26136754	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2772 2771 .
Chr1	stalkie_big_nohaplotig	exon	26136956	26136964	88	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2770 2762 .
Chr1	stalkie_big_nohaplotig	exon	26137513	26137590	50	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2761 2692 .
Chr1	stalkie_big_nohaplotig	exon	26146197	26146207	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2683 2673 .
Chr1	stalkie_big_nohaplotig	exon	26150438	26150444	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2672 2666 .
Chr1	stalkie_big_nohaplotig	exon	26159123	26159131	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2665 2657 .
Chr1	stalkie_big_nohaplotig	exon	26160010	26160012	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2656 2654 .
Chr1	stalkie_big_nohaplotig	exon	26164202	26164204	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2653 2651 .
Chr1	stalkie_big_nohaplotig	exon	26171978	26171989	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2648 2637 .
Chr1	stalkie_big_nohaplotig	exon	26178621	26178623	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2636 2634 .
Chr1	stalkie_big_nohaplotig	exon	26179913	26179916	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2633 2630 .
Chr1	stalkie_big_nohaplotig	exon	26181762	26181763	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2629 2628 .
Chr1	stalkie_big_nohaplotig	exon	26184324	26184325	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2627 2626 .
Chr1	stalkie_big_nohaplotig	exon	26192370	26192373	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2625 2622 .
Chr1	stalkie_big_nohaplotig	exon	26193782	26193786	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2621 2617 .
Chr1	stalkie_big_nohaplotig	exon	26196467	26196472	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2616 2611 .
Chr1	stalkie_big_nohaplotig	exon	26203540	26203547	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2610 2603 .
Chr1	stalkie_big_nohaplotig	exon	26204552	26204556	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2602 2598 .
Chr1	stalkie_big_nohaplotig	exon	26209067	26209072	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2597 2592 .
Chr1	stalkie_big_nohaplotig	exon	26211687	26211697	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2590 2580 .
Chr1	stalkie_big_nohaplotig	exon	26215397	26215405	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2579 2571 .
Chr1	stalkie_big_nohaplotig	exon	26223508	26223512	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2570 2566 .
Chr1	stalkie_big_nohaplotig	exon	26223535	26223542	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2541 2534 .
Chr1	stalkie_big_nohaplotig	exon	26224186	26224187	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2533 2532 .
Chr1	stalkie_big_nohaplotig	exon	26229058	26229066	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2531 2523 .
Chr1	stalkie_big_nohaplotig	exon	26234376	26234380	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2522 2518 .
Chr1	stalkie_big_nohaplotig	exon	26235302	26235309	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2517 2510 .
Chr1	stalkie_big_nohaplotig	exon	26237156	26237160	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2509 2505 .
Chr1	stalkie_big_nohaplotig	exon	26243855	26243856	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2504 2503 .
Chr1	stalkie_big_nohaplotig	exon	26244710	26244712	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2502 2500 .
Chr1	stalkie_big_nohaplotig	exon	26251265	26251267	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2499 2497 .
Chr1	stalkie_big_nohaplotig	exon	26255250	26255256	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2496 2490 .
Chr1	stalkie_big_nohaplotig	exon	26259652	26259706	65	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2433 2376 .
Chr1	stalkie_big_nohaplotig	exon	26260629	26260630	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2375 2374 .
Chr1	stalkie_big_nohaplotig	exon	26262262	26262263	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2373 2372 .
Chr1	stalkie_big_nohaplotig	exon	26264104	26264108	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2371 2367 .
Chr1	stalkie_big_nohaplotig	exon	26278072	26278074	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2366 2364 .
Chr1	stalkie_big_nohaplotig	exon	26283893	26283907	46	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2363 2357 .
Chr1	stalkie_big_nohaplotig	exon	26295821	26295824	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2356 2353 .
Chr1	stalkie_big_nohaplotig	exon	26296812	26296825	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2347 2334 .
Chr1	stalkie_big_nohaplotig	exon	26300277	26300280	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2333 2330 .
Chr1	stalkie_big_nohaplotig	exon	26302267	26302275	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2329 2321 .
Chr1	stalkie_big_nohaplotig	exon	26307058	26307065	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2320 2313 .
Chr1	stalkie_big_nohaplotig	exon	26307700	26307710	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2306 2296 .
Chr1	stalkie_big_nohaplotig	exon	26308658	26308660	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2295 2293 .
Chr1	stalkie_big_nohaplotig	exon	26309969	26309975	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2292 2286 .
Chr1	stalkie_big_nohaplotig	exon	26314527	26314530	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2285 2282 .
Chr1	stalkie_big_nohaplotig	exon	26325516	26325522	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2280 2274 .
Chr1	stalkie_big_nohaplotig	exon	26337591	26337595	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2273 2269 .
Chr1	stalkie_big_nohaplotig	exon	26353076	26353093	50	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2268 2260 .
Chr1	stalkie_big_nohaplotig	exon	26359900	26359905	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2259 2254 .
Chr1	stalkie_big_nohaplotig	exon	26363227	26363228	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2253 2252 .
Chr1	stalkie_big_nohaplotig	exon	26364009	26364017	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2251 2243 .
Chr1	stalkie_big_nohaplotig	exon	26378535	26378542	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2241 2234 .
Chr1	stalkie_big_nohaplotig	exon	26379511	26379516	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2233 2228 .
Chr1	stalkie_big_nohaplotig	exon	26379537	26379547	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2213 2203 .
Chr1	stalkie_big_nohaplotig	exon	26399485	26399487	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2202 2200 .
Chr1	stalkie_big_nohaplotig	exon	26399548	26399551	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2199 2196 .
Chr1	stalkie_big_nohaplotig	exon	26408360	26408364	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2195 2191 .
Chr1	stalkie_big_nohaplotig	exon	26410112	26410121	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2190 2181 .
Chr1	stalkie_big_nohaplotig	exon	26413607	26413608	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2180 2179 .
Chr1	stalkie_big_nohaplotig	exon	26413611	26413618	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2169 2162 .
Chr1	stalkie_big_nohaplotig	exon	26414260	26414265	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2161 2156 .
Chr1	stalkie_big_nohaplotig	exon	26419224	26419228	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2155 2151 .
Chr1	stalkie_big_nohaplotig	exon	26419961	26419964	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2150 2147 .
Chr1	stalkie_big_nohaplotig	exon	26420884	26420886	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2146 2144 .
Chr1	stalkie_big_nohaplotig	exon	26423805	26423808	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2143 2140 .
Chr1	stalkie_big_nohaplotig	exon	26430222	26430229	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2139 2132 .
Chr1	stalkie_big_nohaplotig	exon	26434103	26434110	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2131 2124 .
Chr1	stalkie_big_nohaplotig	exon	26439142	26439148	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2123 2117 .
Chr1	stalkie_big_nohaplotig	exon	26443515	26443517	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2116 2114 .
Chr1	stalkie_big_nohaplotig	exon	26451631	26451637	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2113 2107 .
Chr1	stalkie_big_nohaplotig	exon	26457258	26457266	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2106 2098 .
Chr1	stalkie_big_nohaplotig	exon	26457714	26457720	100	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2097 2091 .
Chr1	stalkie_big_nohaplotig	exon	26458098	26460156	99	-	.	Parent=comp162502_c0_seq1.mrna1;Target=comp162502_c0_seq1 2090 32 .
Chr1	stalkie_big_nohaplotig	CDS	26458205	26458453	.	-	0	Parent=comp162502_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26046286	26046970	.	+	.	ID=FBgn0031485.1.mrna1;geneID=FBgn0031485.1.path1;Name=FBgn0031485.1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=676;mismatches=9;indels=2;unknowns=0;Target=FBgn0031485.1 687 1 .;CDS_Target=FBgn0031485.1 34 2 .;locus=RLOC_00006628
Chr1	stalkie_big_nohaplotig	exon	26046286	26046970	98	+	.	Parent=FBgn0031485.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26046287	26046317	.	+	0	Parent=FBgn0031485.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26118798	26119910	.	-	.	ID=comp157287_c0_seq1.mrna1;geneID=comp157287_c0_seq1.path1;Name=comp157287_c0_seq1;Dir=indeterminatecoverage=98.2;identity=99.1;matches=971;mismatches=4;indels=5;unknowns=0;Target=comp157287_c0_seq1 522 316 .;locus=RLOC_00006628
Chr1	stalkie_big_nohaplotig	exon	26118798	26119496	99	-	.	Parent=comp157287_c0_seq1.mrna1;Target=comp157287_c0_seq1 979 281 .
Chr1	stalkie_big_nohaplotig	exon	26119634	26119910	97	-	.	Parent=comp157287_c0_seq1.mrna1;Target=comp157287_c0_seq1 280 1 .
Chr1	stalkie_big_nohaplotig	CDS	26119255	26119461	.	-	0	Parent=comp157287_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26127635	26128636	.	+	.	ID=FBgn0050350.3.mrna1;geneID=FBgn0050350.3.path1;Name=FBgn0050350.3;Dir=indeterminatecoverage=100.0;identity=99.3;matches=995;mismatches=7;indels=0;unknowns=0;Target=FBgn0050350.3 1002 1 .;locus=RLOC_00006628
Chr1	stalkie_big_nohaplotig	exon	26127635	26128636	99	+	.	Parent=FBgn0050350.3.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26127635	26128636	.	+	0	Parent=FBgn0050350.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26355384	26356078	.	+	.	ID=comp152571_c0_seq1.mrna1;geneID=comp152571_c0_seq1.path1;Name=comp152571_c0_seq1;Dir=indeterminatecoverage=91.1;identity=98.7;matches=688;mismatches=4;indels=5;unknowns=0;Target=comp152571_c0_seq1 695 2 .;CDS_Target=comp152571_c0_seq1 447 289 .;locus=RLOC_00006628
Chr1	stalkie_big_nohaplotig	exon	26355384	26356078	98	+	.	Parent=comp152571_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26355671	26355832	.	+	0	Parent=comp152571_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26358983	26369786	.	-	.	ID=FBgn0263108.1.mrna1;geneID=FBgn0263108.1.path1;Name=FBgn0263108.1;Dir=sensecoverage=100.0;identity=99.9;matches=1921;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006628
Chr1	stalkie_big_nohaplotig	exon	26358983	26359306	100	-	.	Parent=FBgn0263108.1.mrna1;Target=FBgn0263108.1 1600 1923 +
Chr1	stalkie_big_nohaplotig	exon	26360901	26361961	99	-	.	Parent=FBgn0263108.1.mrna1;Target=FBgn0263108.1 539 1599 +
Chr1	stalkie_big_nohaplotig	exon	26368814	26368922	100	-	.	Parent=FBgn0263108.1.mrna1;Target=FBgn0263108.1 430 538 +
Chr1	stalkie_big_nohaplotig	exon	26369291	26369550	100	-	.	Parent=FBgn0263108.1.mrna1;Target=FBgn0263108.1 170 429 +
Chr1	stalkie_big_nohaplotig	exon	26369618	26369786	100	-	.	Parent=FBgn0263108.1.mrna1;Target=FBgn0263108.1 1 169 +
Chr1	stalkie_big_nohaplotig	CDS	26358983	26359306	.	-	0	Parent=FBgn0263108.1.mrna1;Target=FBgn0263108.1 1600 1923 +
Chr1	stalkie_big_nohaplotig	CDS	26360901	26361961	.	-	2	Parent=FBgn0263108.1.mrna1;Target=FBgn0263108.1 539 1599 +
Chr1	stalkie_big_nohaplotig	CDS	26368814	26368922	.	-	0	Parent=FBgn0263108.1.mrna1;Target=FBgn0263108.1 430 538 +
Chr1	stalkie_big_nohaplotig	CDS	26369291	26369550	.	-	2	Parent=FBgn0263108.1.mrna1;Target=FBgn0263108.1 170 429 +
Chr1	stalkie_big_nohaplotig	CDS	26369618	26369786	.	-	0	Parent=FBgn0263108.1.mrna1;Target=FBgn0263108.1 1 169 +
Chr1	stalkie_big_nohaplotig	mRNA	26365220	26369787	.	-	.	ID=comp161249_c2_seq1.mrna1;geneID=comp161249_c2_seq1.path1;Name=comp161249_c2_seq1;Dir=sensecoverage=89.1;identity=99.7;matches=2340;mismatches=3;indels=3;unknowns=0;locus=RLOC_00006628
Chr1	stalkie_big_nohaplotig	exon	26365220	26367026	99	-	.	Parent=comp161249_c2_seq1.mrna1;Target=comp161249_c2_seq1 540 2343 +
Chr1	stalkie_big_nohaplotig	exon	26368814	26368922	100	-	.	Parent=comp161249_c2_seq1.mrna1;Target=comp161249_c2_seq1 431 539 +
Chr1	stalkie_big_nohaplotig	exon	26369291	26369550	100	-	.	Parent=comp161249_c2_seq1.mrna1;Target=comp161249_c2_seq1 171 430 +
Chr1	stalkie_big_nohaplotig	exon	26369618	26369787	100	-	.	Parent=comp161249_c2_seq1.mrna1;Target=comp161249_c2_seq1 1 170 +
Chr1	stalkie_big_nohaplotig	CDS	26365942	26367026	.	-	2	Parent=comp161249_c2_seq1.mrna1;Target=comp161249_c2_seq1 540 1621 +
Chr1	stalkie_big_nohaplotig	CDS	26368814	26368922	.	-	0	Parent=comp161249_c2_seq1.mrna1;Target=comp161249_c2_seq1 431 539 +
Chr1	stalkie_big_nohaplotig	CDS	26369291	26369550	.	-	2	Parent=comp161249_c2_seq1.mrna1;Target=comp161249_c2_seq1 171 430 +
Chr1	stalkie_big_nohaplotig	CDS	26369618	26369786	.	-	0	Parent=comp161249_c2_seq1.mrna1;Target=comp161249_c2_seq1 2 170 +
Chr1	stalkie_big_nohaplotig	mRNA	26388180	26394264	.	-	.	ID=FBgn0086906.mrna1;geneID=FBgn0086906.path1;Name=FBgn0086906;Dir=sensecoverage=100.0;identity=99.6;matches=5115;mismatches=20;indels=1;unknowns=0;locus=RLOC_00006628
Chr1	stalkie_big_nohaplotig	exon	26388180	26394264	.	-	.	Parent=FBgn0086906.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26392002	26392118	.	-	0	Parent=FBgn0086906.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26388180	26410354	.	-	.	ID=FBgn0086906.mrna1;geneID=FBgn0086906.path1;Name=FBgn0086906;Dir=indeterminatecoverage=89.4;identity=100.0;matches=1067;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006628
Chr1	stalkie_big_nohaplotig	exon	26388180	26388389	99	-	.	Parent=FBgn0086906.mrna1;Target=FBgn0086906 4926 5136 +
Chr1	stalkie_big_nohaplotig	exon	26388447	26388588	98	-	.	Parent=FBgn0086906.mrna1;Target=FBgn0086906 4784 4925 +
Chr1	stalkie_big_nohaplotig	exon	26388666	26390333	99	-	.	Parent=FBgn0086906.mrna1;Target=FBgn0086906 3116 4783 +
Chr1	stalkie_big_nohaplotig	exon	26390489	26391460	99	-	.	Parent=FBgn0086906.mrna1;Target=FBgn0086906 2144 3115 +
Chr1	stalkie_big_nohaplotig	exon	26391668	26391919	99	-	.	Parent=FBgn0086906.mrna1;Target=FBgn0086906 1892 2143 +
Chr1	stalkie_big_nohaplotig	exon	26391979	26392020	100	-	.	Parent=FBgn0086906.mrna1;Target=FBgn0086906 1850 1891 +
Chr1	stalkie_big_nohaplotig	exon	26392416	26394264	99	-	.	Parent=FBgn0086906.mrna1;Target=FBgn0086906 1 1849 +
Chr1	stalkie_big_nohaplotig	exon	26409288	26410354	100	-	.	Parent=FBgn0086906.mrna1;Target=FBgn0086906 1194 128 .
Chr1	stalkie_big_nohaplotig	CDS	26388180	26388389	.	-	1	Parent=FBgn0086906.mrna1;Target=FBgn0086906 4926 5136 +
Chr1	stalkie_big_nohaplotig	CDS	26388447	26388588	.	-	2	Parent=FBgn0086906.mrna1;Target=FBgn0086906 4784 4925 +
Chr1	stalkie_big_nohaplotig	CDS	26388666	26390333	.	-	2	Parent=FBgn0086906.mrna1;Target=FBgn0086906 3116 4783 +
Chr1	stalkie_big_nohaplotig	CDS	26390489	26391460	.	-	2	Parent=FBgn0086906.mrna1;Target=FBgn0086906 2144 3115 +
Chr1	stalkie_big_nohaplotig	CDS	26391668	26391919	.	-	2	Parent=FBgn0086906.mrna1;Target=FBgn0086906 1892 2143 +
Chr1	stalkie_big_nohaplotig	CDS	26391979	26392020	.	-	2	Parent=FBgn0086906.mrna1;Target=FBgn0086906 1850 1891 +
Chr1	stalkie_big_nohaplotig	CDS	26392416	26394264	.	-	0	Parent=FBgn0086906.mrna1;Target=FBgn0086906 1 1849 +
Chr1	stalkie_big_nohaplotig	CDS	26409288	26410352	.	-	0	Parent=FBgn0086906.mrna1;Target=FBgn0086906 1194 130 .
Chr1	stalkie_big_nohaplotig	mRNA	26421250	26429929	.	+	.	ID=FBgn0086906.mrna1;geneID=FBgn0086906.path1;Name=FBgn0086906;Dir=sensecoverage=100.0;identity=99.9;matches=6784;mismatches=7;indels=1;unknowns=0;locus=RLOC_00006628
Chr1	stalkie_big_nohaplotig	exon	26421250	26429929	.	+	.	Parent=FBgn0086906.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26421250	26434624	.	+	.	ID=FBgn0086906.mrna1;geneID=FBgn0086906.path1;Name=FBgn0086906;Dir=sensecoverage=98.4;identity=99.8;matches=1328;mismatches=3;indels=0;unknowns=0;locus=RLOC_00006628
Chr1	stalkie_big_nohaplotig	exon	26421250	26426665	99	+	.	Parent=FBgn0086906.mrna1;Target=FBgn0086906 1 5416 +
Chr1	stalkie_big_nohaplotig	exon	26426907	26428142	100	+	.	Parent=FBgn0086906.mrna1;Target=FBgn0086906 5417 6652 +
Chr1	stalkie_big_nohaplotig	exon	26428757	26428824	100	+	.	Parent=FBgn0086906.mrna1;Target=FBgn0086906 6653 6720 +
Chr1	stalkie_big_nohaplotig	exon	26429859	26429929	98	+	.	Parent=FBgn0086906.mrna1;Target=FBgn0086906 6721 6792 +
Chr1	stalkie_big_nohaplotig	exon	26430483	26430557	100	+	.	Parent=FBgn0086906.mrna1;Target=FBgn0086906 23 97 +
Chr1	stalkie_big_nohaplotig	exon	26431543	26431647	99	+	.	Parent=FBgn0086906.mrna1;Target=FBgn0086906 98 202 +
Chr1	stalkie_big_nohaplotig	exon	26432304	26433325	99	+	.	Parent=FBgn0086906.mrna1;Target=FBgn0086906 203 1224 +
Chr1	stalkie_big_nohaplotig	exon	26434323	26434383	100	+	.	Parent=FBgn0086906.mrna1;Target=FBgn0086906 1225 1285 +
Chr1	stalkie_big_nohaplotig	exon	26434557	26434624	100	+	.	Parent=FBgn0086906.mrna1;Target=FBgn0086906 1286 1353 +
Chr1	stalkie_big_nohaplotig	CDS	26421250	26426665	99	+	0	Parent=FBgn0086906.mrna1;Target=FBgn0086906 1 5416 +
Chr1	stalkie_big_nohaplotig	CDS	26426907	26428142	100	+	1	Parent=FBgn0086906.mrna1;Target=FBgn0086906 5417 6652 +
Chr1	stalkie_big_nohaplotig	CDS	26428757	26428824	100	+	1	Parent=FBgn0086906.mrna1;Target=FBgn0086906 6653 6720 +
Chr1	stalkie_big_nohaplotig	CDS	26429859	26429929	98	+	0	Parent=FBgn0086906.mrna1;Target=FBgn0086906 6721 6792 +
Chr1	stalkie_big_nohaplotig	CDS	26430485	26430557	100	+	0	Parent=FBgn0086906.mrna1;Target=FBgn0086906 25 97 +
Chr1	stalkie_big_nohaplotig	CDS	26431543	26431647	99	+	1	Parent=FBgn0086906.mrna1;Target=FBgn0086906 98 202 +
Chr1	stalkie_big_nohaplotig	CDS	26432304	26433325	99	+	1	Parent=FBgn0086906.mrna1;Target=FBgn0086906 203 1224 +
Chr1	stalkie_big_nohaplotig	CDS	26434323	26434383	100	+	0	Parent=FBgn0086906.mrna1;Target=FBgn0086906 1225 1285 +
Chr1	stalkie_big_nohaplotig	CDS	26434557	26434624	100	+	1	Parent=FBgn0086906.mrna1;Target=FBgn0086906 1286 1353 +
Chr1	stalkie_big_nohaplotig	mRNA	26430483	26443302	.	+	.	ID=comp163260_c0_seq1.mrna1;geneID=comp163260_c0_seq1.path1;Name=comp163260_c0_seq1;Dir=sensecoverage=57.3;identity=99.7;matches=6132;mismatches=18;indels=0;unknowns=0;locus=RLOC_00006628
Chr1	stalkie_big_nohaplotig	exon	26430483	26430557	100	+	.	Parent=comp163260_c0_seq1.mrna1;Target=comp163260_c0_seq1 25 99 +
Chr1	stalkie_big_nohaplotig	exon	26437228	26443302	99	+	.	Parent=comp163260_c0_seq1.mrna1;Target=comp163260_c0_seq1 100 6174 +
Chr1	stalkie_big_nohaplotig	CDS	26430485	26430557	.	+	0	Parent=comp163260_c0_seq1.mrna1;Target=comp163260_c0_seq1 27 99 +
Chr1	stalkie_big_nohaplotig	CDS	26437228	26443301	.	+	2	Parent=comp163260_c0_seq1.mrna1;Target=comp163260_c0_seq1 100 6173 +
Chr1	stalkie_big_nohaplotig	mRNA	26521785	26551012	.	-	.	ID=FBgn0052311.1.mrna2;geneID=FBgn0052311.1.path2;Name=FBgn0052311.1;Dir=sensecoverage=96.1;identity=99.6;matches=9422;mismatches=40;indels=0;unknowns=0;locus=RLOC_00006628
Chr1	stalkie_big_nohaplotig	exon	26521785	26521885	98	-	.	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 9746 9846 +
Chr1	stalkie_big_nohaplotig	exon	26521951	26522131	99	-	.	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 9565 9745 +
Chr1	stalkie_big_nohaplotig	exon	26522200	26522282	98	-	.	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 9482 9564 +
Chr1	stalkie_big_nohaplotig	exon	26523306	26523779	100	-	.	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 9008 9481 +
Chr1	stalkie_big_nohaplotig	exon	26524095	26525544	99	-	.	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 7558 9007 +
Chr1	stalkie_big_nohaplotig	exon	26528186	26528346	99	-	.	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 7397 7557 +
Chr1	stalkie_big_nohaplotig	exon	26528420	26528626	99	-	.	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 7190 7396 +
Chr1	stalkie_big_nohaplotig	exon	26530349	26532146	99	-	.	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 5392 7189 +
Chr1	stalkie_big_nohaplotig	exon	26535547	26535707	99	-	.	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 5231 5391 +
Chr1	stalkie_big_nohaplotig	exon	26536052	26538002	99	-	.	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 3280 5230 +
Chr1	stalkie_big_nohaplotig	exon	26538060	26538254	99	-	.	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 3085 3279 +
Chr1	stalkie_big_nohaplotig	exon	26543133	26543882	99	-	.	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 2335 3084 +
Chr1	stalkie_big_nohaplotig	exon	26544064	26544240	100	-	.	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 2158 2334 +
Chr1	stalkie_big_nohaplotig	exon	26549111	26549452	99	-	.	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 1816 2157 +
Chr1	stalkie_big_nohaplotig	exon	26549520	26550827	99	-	.	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 508 1815 +
Chr1	stalkie_big_nohaplotig	exon	26550890	26551012	98	-	.	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 385 507 +
Chr1	stalkie_big_nohaplotig	CDS	26521785	26521885	.	-	2	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 9746 9846 +
Chr1	stalkie_big_nohaplotig	CDS	26521951	26522131	.	-	0	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 9565 9745 +
Chr1	stalkie_big_nohaplotig	CDS	26522200	26522282	.	-	2	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 9482 9564 +
Chr1	stalkie_big_nohaplotig	CDS	26523306	26523779	.	-	2	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 9008 9481 +
Chr1	stalkie_big_nohaplotig	CDS	26524095	26525544	.	-	0	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 7558 9007 +
Chr1	stalkie_big_nohaplotig	CDS	26528186	26528346	.	-	2	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 7397 7557 +
Chr1	stalkie_big_nohaplotig	CDS	26528420	26528626	.	-	2	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 7190 7396 +
Chr1	stalkie_big_nohaplotig	CDS	26530349	26532146	.	-	0	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 5392 7189 +
Chr1	stalkie_big_nohaplotig	CDS	26535547	26535707	.	-	2	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 5231 5391 +
Chr1	stalkie_big_nohaplotig	CDS	26536052	26538002	.	-	0	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 3280 5230 +
Chr1	stalkie_big_nohaplotig	CDS	26538060	26538254	.	-	0	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 3085 3279 +
Chr1	stalkie_big_nohaplotig	CDS	26543133	26543882	.	-	0	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 2335 3084 +
Chr1	stalkie_big_nohaplotig	CDS	26544064	26544240	.	-	0	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 2158 2334 +
Chr1	stalkie_big_nohaplotig	CDS	26549111	26549452	.	-	0	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 1816 2157 +
Chr1	stalkie_big_nohaplotig	CDS	26549520	26550827	.	-	0	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 508 1815 +
Chr1	stalkie_big_nohaplotig	CDS	26550890	26551012	.	-	0	Parent=FBgn0052311.1.mrna2;Target=FBgn0052311.1 385 507 +
Chr1	stalkie_big_nohaplotig	mRNA	26522983	26523328	.	-	.	ID=comp437121_c0_seq1.mrna1;geneID=comp437121_c0_seq1.path1;Name=comp437121_c0_seq1;Dir=indeterminatecoverage=99.1;identity=98.3;matches=340;mismatches=5;indels=1;unknowns=0;Target=comp437121_c0_seq1 345 1 .;CDS_Target=comp437121_c0_seq1 101 3 .;locus=RLOC_00006628
Chr1	stalkie_big_nohaplotig	exon	26522983	26523328	98	-	.	Parent=comp437121_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26523228	26523326	.	-	0	Parent=comp437121_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26523757	26524115	.	-	.	ID=comp116855_c0_seq1.mrna1;geneID=comp116855_c0_seq1.path1;Name=comp116855_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=354;mismatches=5;indels=0;unknowns=0;Target=comp116855_c0_seq1 359 1 .;CDS_Target=comp116855_c0_seq1 53 33 .;locus=RLOC_00006628
Chr1	stalkie_big_nohaplotig	exon	26523757	26524115	98	-	.	Parent=comp116855_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26524063	26524083	.	-	0	Parent=comp116855_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26525525	26526015	.	-	.	ID=comp98797_c0_seq1.mrna1;geneID=comp98797_c0_seq1.path1;Name=comp98797_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=490;mismatches=1;indels=0;unknowns=0;Target=comp98797_c0_seq1 491 1 .;CDS_Target=comp98797_c0_seq1 162 1 .;locus=RLOC_00006628
Chr1	stalkie_big_nohaplotig	exon	26525525	26526015	99	-	.	Parent=comp98797_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26525854	26526015	.	-	0	Parent=comp98797_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26688363	26688874	.	+	.	ID=comp74173_c0_seq1.mrna1;geneID=comp74173_c0_seq1.path1;Name=comp74173_c0_seq1;Dir=indeterminatecoverage=99.6;identity=97.1;matches=508;mismatches=4;indels=11;unknowns=0;Target=comp74173_c0_seq1 525 3 .;CDS_Target=comp74173_c0_seq1 454 344 .;locus=RLOC_00006628
Chr1	stalkie_big_nohaplotig	exon	26688363	26688874	97	+	.	Parent=comp74173_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26688693	26688803	.	+	0	Parent=comp74173_c0_seq1.mrna1
Chr1	gffcl	locus	25911910	25914126	.	+	.	ID=RLOC_00006629;geneIDs=comp160710_c0_seq1.path1;transcripts=comp160710_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25911910	25914126	.	+	.	ID=comp160710_c0_seq1.mrna1;geneID=comp160710_c0_seq1.path1;Name=comp160710_c0_seq1;Dir=antisensecoverage=99.9;identity=89.1;matches=757;mismatches=69;indels=24;unknowns=0;Target=comp160710_c0_seq1 826 846 .;locus=RLOC_00006629
Chr1	stalkie_big_nohaplotig	exon	25911910	25912527	91	+	.	Parent=comp160710_c0_seq1.mrna1;Target=comp160710_c0_seq1 212 846 -
Chr1	stalkie_big_nohaplotig	exon	25913915	25914126	82	+	.	Parent=comp160710_c0_seq1.mrna1;Target=comp160710_c0_seq1 1 211 -
Chr1	stalkie_big_nohaplotig	CDS	25911910	25911931	.	+	0	Parent=comp160710_c0_seq1.mrna1
Chr1	gffcl	locus	25931815	25932305	.	+	.	ID=RLOC_00006630;geneIDs=comp146909_c0_seq1.path1;transcripts=comp146909_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25931815	25932305	.	+	.	ID=comp146909_c0_seq1.mrna1;geneID=comp146909_c0_seq1.path1;Name=comp146909_c0_seq1;Dir=sensecoverage=100.0;identity=98.7;matches=384;mismatches=4;indels=1;unknowns=0;locus=RLOC_00006630
Chr1	stalkie_big_nohaplotig	exon	25931815	25931969	96	+	.	Parent=comp146909_c0_seq1.mrna1;Target=comp146909_c0_seq1 1 156 +
Chr1	stalkie_big_nohaplotig	exon	25932073	25932305	100	+	.	Parent=comp146909_c0_seq1.mrna1;Target=comp146909_c0_seq1 157 389 +
Chr1	stalkie_big_nohaplotig	CDS	25931900	25931969	.	+	0	Parent=comp146909_c0_seq1.mrna1;Target=comp146909_c0_seq1 87 156 +
Chr1	stalkie_big_nohaplotig	CDS	25932073	25932182	.	+	2	Parent=comp146909_c0_seq1.mrna1;Target=comp146909_c0_seq1 157 266 +
Chr1	gffcl	locus	25965583	27915039	.	-	.	ID=RLOC_00006631;geneIDs=comp150094_c0_seq1.path1;transcripts=comp150094_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25965583	27915039	.	-	.	ID=comp150094_c0_seq1.mrna1;geneID=comp150094_c0_seq1.path1;Name=comp150094_c0_seq1;Dir=indeterminatecoverage=78.1;identity=97.1;matches=400;mismatches=12;indels=0;unknowns=0;Target=comp150094_c0_seq1 88 23 .;locus=RLOC_00006631
Chr1	stalkie_big_nohaplotig	exon	25965583	25965600	100	-	.	Parent=comp150094_c0_seq1.mrna1;Target=comp150094_c0_seq1 435 418 .
Chr1	stalkie_big_nohaplotig	exon	25966811	25966815	100	-	.	Parent=comp150094_c0_seq1.mrna1;Target=comp150094_c0_seq1 417 413 .
Chr1	stalkie_big_nohaplotig	exon	25970403	25970406	100	-	.	Parent=comp150094_c0_seq1.mrna1;Target=comp150094_c0_seq1 412 409 .
Chr1	stalkie_big_nohaplotig	exon	25974526	25974528	100	-	.	Parent=comp150094_c0_seq1.mrna1;Target=comp150094_c0_seq1 408 406 .
Chr1	stalkie_big_nohaplotig	exon	25981185	25981186	100	-	.	Parent=comp150094_c0_seq1.mrna1;Target=comp150094_c0_seq1 405 404 .
Chr1	stalkie_big_nohaplotig	exon	25986542	25986556	100	-	.	Parent=comp150094_c0_seq1.mrna1;Target=comp150094_c0_seq1 403 389 .
Chr1	stalkie_big_nohaplotig	exon	26002710	26002715	100	-	.	Parent=comp150094_c0_seq1.mrna1;Target=comp150094_c0_seq1 388 383 .
Chr1	stalkie_big_nohaplotig	exon	27914535	27914600	100	-	.	Parent=comp150094_c0_seq1.mrna1;Target=comp150094_c0_seq1 382 317 .
Chr1	stalkie_big_nohaplotig	exon	27914747	27915039	95	-	.	Parent=comp150094_c0_seq1.mrna1;Target=comp150094_c0_seq1 315 23 .
Chr1	stalkie_big_nohaplotig	CDS	27914974	27915039	.	-	0	Parent=comp150094_c0_seq1.mrna1
Chr1	gffcl	locus	25984176	25984529	.	-	.	ID=RLOC_00006632;geneIDs=comp152754_c0_seq1.path1;transcripts=comp152754_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	25984176	25984529	.	-	.	ID=comp152754_c0_seq1.mrna1;geneID=comp152754_c0_seq1.path1;Name=comp152754_c0_seq1;Dir=sensecoverage=99.7;identity=99.3;matches=294;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006632
Chr1	stalkie_big_nohaplotig	exon	25984176	25984338	99	-	.	Parent=comp152754_c0_seq1.mrna1;Target=comp152754_c0_seq1 134 296 +
Chr1	stalkie_big_nohaplotig	exon	25984397	25984529	99	-	.	Parent=comp152754_c0_seq1.mrna1;Target=comp152754_c0_seq1 1 133 +
Chr1	stalkie_big_nohaplotig	CDS	25984247	25984338	.	-	2	Parent=comp152754_c0_seq1.mrna1;Target=comp152754_c0_seq1 134 225 +
Chr1	stalkie_big_nohaplotig	CDS	25984397	25984457	.	-	0	Parent=comp152754_c0_seq1.mrna1;Target=comp152754_c0_seq1 73 133 +
Chr1	gffcl	locus	26071478	26072022	.	-	.	ID=RLOC_00006633;geneIDs=comp148262_c1_seq1.path1;transcripts=comp148262_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26071478	26072022	.	-	.	ID=comp148262_c1_seq1.mrna1;geneID=comp148262_c1_seq1.path1;Name=comp148262_c1_seq1;Dir=indeterminatecoverage=97.0;identity=99.3;matches=541;mismatches=4;indels=0;unknowns=0;Target=comp148262_c1_seq1 548 4 .;CDS_Target=comp148262_c1_seq1 453 280 .;locus=RLOC_00006633
Chr1	stalkie_big_nohaplotig	exon	26071478	26072022	99	-	.	Parent=comp148262_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26071573	26071746	.	-	0	Parent=comp148262_c1_seq1.mrna1
Chr1	gffcl	locus	26113375	26940407	.	+	.	ID=RLOC_00006634;geneIDs=FBgn0262870.1.path1,comp163249_c0_seq1.path2;transcripts=comp163249_c0_seq1.mrna2,FBgn0262870.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26113375	26940407	.	+	.	ID=comp163249_c0_seq1.mrna2;geneID=comp163249_c0_seq1.path2;Name=comp163249_c0_seq1;Dir=sensecoverage=97.7;identity=98.8;matches=6349;mismatches=20;indels=55;unknowns=0;locus=RLOC_00006634
Chr1	stalkie_big_nohaplotig	exon	26113375	26113956	98	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 125 712 +
Chr1	stalkie_big_nohaplotig	exon	26114084	26114330	99	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 713 959 +
Chr1	stalkie_big_nohaplotig	exon	26115925	26116144	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 960 1179 +
Chr1	stalkie_big_nohaplotig	exon	26116950	26117085	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 1180 1315 +
Chr1	stalkie_big_nohaplotig	exon	26122524	26122808	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 1316 1600 +
Chr1	stalkie_big_nohaplotig	exon	26132581	26133111	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 1601 2131 +
Chr1	stalkie_big_nohaplotig	exon	26133696	26133892	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 2132 2328 +
Chr1	stalkie_big_nohaplotig	exon	26141476	26142341	99	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 2329 3194 +
Chr1	stalkie_big_nohaplotig	exon	26146944	26147158	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 3195 3409 +
Chr1	stalkie_big_nohaplotig	exon	26147284	26147683	98	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 3410 3809 +
Chr1	stalkie_big_nohaplotig	exon	26154915	26155162	99	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 3810 4057 +
Chr1	stalkie_big_nohaplotig	exon	26155364	26155813	99	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 4058 4507 +
Chr1	stalkie_big_nohaplotig	exon	26159165	26159365	99	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 4508 4708 +
Chr1	stalkie_big_nohaplotig	exon	26161349	26161960	99	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 4709 5320 +
Chr1	stalkie_big_nohaplotig	exon	26165158	26165339	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 5321 5502 +
Chr1	stalkie_big_nohaplotig	exon	26165486	26165776	99	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 5503 5793 +
Chr1	stalkie_big_nohaplotig	exon	26165879	26166281	99	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 5794 6196 +
Chr1	stalkie_big_nohaplotig	exon	26166360	26166505	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6197 6342 +
Chr1	stalkie_big_nohaplotig	exon	26862893	26862912	53	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6470 6498 +
Chr1	stalkie_big_nohaplotig	exon	26864748	26864752	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6499 6503 +
Chr1	stalkie_big_nohaplotig	exon	26865862	26865867	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6504 6509 +
Chr1	stalkie_big_nohaplotig	exon	26868893	26868894	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6510 6511 +
Chr1	stalkie_big_nohaplotig	exon	26873528	26873533	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6512 6517 +
Chr1	stalkie_big_nohaplotig	exon	26880395	26880400	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6518 6523 +
Chr1	stalkie_big_nohaplotig	exon	26896244	26896255	25	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6524 6571 +
Chr1	stalkie_big_nohaplotig	exon	26896866	26896871	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6572 6577 +
Chr1	stalkie_big_nohaplotig	exon	26902176	26902186	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6578 6588 +
Chr1	stalkie_big_nohaplotig	exon	26902953	26902958	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6589 6594 +
Chr1	stalkie_big_nohaplotig	exon	26903011	26903013	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6595 6597 +
Chr1	stalkie_big_nohaplotig	exon	26909251	26909253	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6598 6600 +
Chr1	stalkie_big_nohaplotig	exon	26924910	26924922	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6601 6613 +
Chr1	stalkie_big_nohaplotig	exon	26932687	26932693	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6854 6860 +
Chr1	stalkie_big_nohaplotig	exon	26932749	26932756	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6861 6868 +
Chr1	stalkie_big_nohaplotig	exon	26939025	26939032	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6869 6876 +
Chr1	stalkie_big_nohaplotig	exon	26940248	26940261	71	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6882 6893 +
Chr1	stalkie_big_nohaplotig	exon	26940385	26940407	100	+	.	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6921 6943 +
Chr1	stalkie_big_nohaplotig	CDS	26113410	26113956	.	+	0	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 166 712 +
Chr1	stalkie_big_nohaplotig	CDS	26114084	26114330	.	+	2	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 713 959 +
Chr1	stalkie_big_nohaplotig	CDS	26115925	26116144	.	+	1	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 960 1179 +
Chr1	stalkie_big_nohaplotig	CDS	26116950	26117085	.	+	0	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 1180 1315 +
Chr1	stalkie_big_nohaplotig	CDS	26122524	26122808	.	+	2	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 1316 1600 +
Chr1	stalkie_big_nohaplotig	CDS	26132581	26133111	.	+	2	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 1601 2131 +
Chr1	stalkie_big_nohaplotig	CDS	26133696	26133892	.	+	2	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 2132 2328 +
Chr1	stalkie_big_nohaplotig	CDS	26141476	26142341	.	+	0	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 2329 3194 +
Chr1	stalkie_big_nohaplotig	CDS	26146944	26147158	.	+	1	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 3195 3409 +
Chr1	stalkie_big_nohaplotig	CDS	26147284	26147683	.	+	2	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 3410 3809 +
Chr1	stalkie_big_nohaplotig	CDS	26154915	26155162	.	+	1	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 3810 4057 +
Chr1	stalkie_big_nohaplotig	CDS	26155364	26155813	.	+	2	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 4058 4507 +
Chr1	stalkie_big_nohaplotig	CDS	26159165	26159365	.	+	2	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 4508 4708 +
Chr1	stalkie_big_nohaplotig	CDS	26161349	26161960	.	+	2	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 4709 5320 +
Chr1	stalkie_big_nohaplotig	CDS	26165158	26165339	.	+	2	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 5321 5502 +
Chr1	stalkie_big_nohaplotig	CDS	26165486	26165776	.	+	0	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 5503 5793 +
Chr1	stalkie_big_nohaplotig	CDS	26165879	26166281	.	+	0	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 5794 6196 +
Chr1	stalkie_big_nohaplotig	CDS	26166360	26166505	.	+	2	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6197 6342 +
Chr1	stalkie_big_nohaplotig	CDS	26862893	26862912	.	+	0	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6470 6498 +
Chr1	stalkie_big_nohaplotig	CDS	26864748	26864752	.	+	1	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6499 6503 +
Chr1	stalkie_big_nohaplotig	CDS	26865862	26865867	.	+	2	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6504 6509 +
Chr1	stalkie_big_nohaplotig	CDS	26868893	26868894	.	+	2	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6510 6511 +
Chr1	stalkie_big_nohaplotig	CDS	26873528	26873533	.	+	0	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6512 6517 +
Chr1	stalkie_big_nohaplotig	CDS	26880395	26880400	.	+	0	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6518 6523 +
Chr1	stalkie_big_nohaplotig	CDS	26896244	26896255	.	+	0	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6524 6571 +
Chr1	stalkie_big_nohaplotig	CDS	26896866	26896871	.	+	0	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6572 6577 +
Chr1	stalkie_big_nohaplotig	CDS	26902176	26902186	.	+	0	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6578 6588 +
Chr1	stalkie_big_nohaplotig	CDS	26902953	26902958	.	+	1	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6589 6594 +
Chr1	stalkie_big_nohaplotig	CDS	26903011	26903013	.	+	1	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6595 6597 +
Chr1	stalkie_big_nohaplotig	CDS	26909251	26909253	.	+	1	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6598 6600 +
Chr1	stalkie_big_nohaplotig	CDS	26924910	26924922	.	+	1	Parent=comp163249_c0_seq1.mrna2;Target=comp163249_c0_seq1 6601 6613 +
Chr1	stalkie_big_nohaplotig	mRNA	26113393	26173493	.	+	.	ID=FBgn0262870.1.mrna1;geneID=FBgn0262870.1.path1;Name=FBgn0262870.1;Dir=sensecoverage=99.8;identity=99.7;matches=6342;mismatches=17;indels=0;unknowns=0;locus=RLOC_00006634
Chr1	stalkie_big_nohaplotig	exon	26113393	26113956	100	+	.	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 14 577 +
Chr1	stalkie_big_nohaplotig	exon	26114084	26114330	99	+	.	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 578 824 +
Chr1	stalkie_big_nohaplotig	exon	26115925	26116144	100	+	.	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 825 1044 +
Chr1	stalkie_big_nohaplotig	exon	26116950	26117085	100	+	.	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 1045 1180 +
Chr1	stalkie_big_nohaplotig	exon	26122524	26122808	100	+	.	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 1181 1465 +
Chr1	stalkie_big_nohaplotig	exon	26132581	26133111	100	+	.	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 1466 1996 +
Chr1	stalkie_big_nohaplotig	exon	26133696	26133892	100	+	.	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 1997 2193 +
Chr1	stalkie_big_nohaplotig	exon	26141476	26142341	99	+	.	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 2194 3059 +
Chr1	stalkie_big_nohaplotig	exon	26146944	26147158	100	+	.	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 3060 3274 +
Chr1	stalkie_big_nohaplotig	exon	26147284	26147683	98	+	.	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 3275 3674 +
Chr1	stalkie_big_nohaplotig	exon	26154915	26155162	99	+	.	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 3675 3922 +
Chr1	stalkie_big_nohaplotig	exon	26155364	26155813	99	+	.	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 3923 4372 +
Chr1	stalkie_big_nohaplotig	exon	26159165	26159365	99	+	.	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 4373 4573 +
Chr1	stalkie_big_nohaplotig	exon	26161349	26161960	99	+	.	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 4574 5185 +
Chr1	stalkie_big_nohaplotig	exon	26165158	26165339	100	+	.	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 5186 5367 +
Chr1	stalkie_big_nohaplotig	exon	26165486	26165776	99	+	.	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 5368 5658 +
Chr1	stalkie_big_nohaplotig	exon	26165879	26166281	99	+	.	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 5659 6061 +
Chr1	stalkie_big_nohaplotig	exon	26166360	26166505	100	+	.	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 6062 6207 +
Chr1	stalkie_big_nohaplotig	exon	26173329	26173493	98	+	.	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 6208 6372 +
Chr1	stalkie_big_nohaplotig	CDS	26113395	26113956	.	+	0	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 16 577 +
Chr1	stalkie_big_nohaplotig	CDS	26114084	26114330	.	+	2	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 578 824 +
Chr1	stalkie_big_nohaplotig	CDS	26115925	26116144	.	+	1	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 825 1044 +
Chr1	stalkie_big_nohaplotig	CDS	26116950	26117085	.	+	0	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 1045 1180 +
Chr1	stalkie_big_nohaplotig	CDS	26122524	26122808	.	+	2	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 1181 1465 +
Chr1	stalkie_big_nohaplotig	CDS	26132581	26133111	.	+	2	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 1466 1996 +
Chr1	stalkie_big_nohaplotig	CDS	26133696	26133892	.	+	2	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 1997 2193 +
Chr1	stalkie_big_nohaplotig	CDS	26141476	26142341	.	+	0	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 2194 3059 +
Chr1	stalkie_big_nohaplotig	CDS	26146944	26147158	.	+	1	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 3060 3274 +
Chr1	stalkie_big_nohaplotig	CDS	26147284	26147683	.	+	2	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 3275 3674 +
Chr1	stalkie_big_nohaplotig	CDS	26154915	26155162	.	+	1	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 3675 3922 +
Chr1	stalkie_big_nohaplotig	CDS	26155364	26155813	.	+	2	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 3923 4372 +
Chr1	stalkie_big_nohaplotig	CDS	26159165	26159365	.	+	2	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 4373 4573 +
Chr1	stalkie_big_nohaplotig	CDS	26161349	26161960	.	+	2	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 4574 5185 +
Chr1	stalkie_big_nohaplotig	CDS	26165158	26165339	.	+	2	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 5186 5367 +
Chr1	stalkie_big_nohaplotig	CDS	26165486	26165776	.	+	0	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 5368 5658 +
Chr1	stalkie_big_nohaplotig	CDS	26165879	26166281	.	+	0	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 5659 6061 +
Chr1	stalkie_big_nohaplotig	CDS	26166360	26166505	.	+	2	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 6062 6207 +
Chr1	stalkie_big_nohaplotig	CDS	26173329	26173493	.	+	0	Parent=FBgn0262870.1.mrna1;Target=FBgn0262870.1 6208 6372 +
Chr1	gffcl	locus	26129985	26130962	.	-	.	ID=RLOC_00006635;geneIDs=FBgn0050350.2.path1;transcripts=FBgn0050350.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26129985	26130962	.	-	.	ID=FBgn0050350.2.mrna1;geneID=FBgn0050350.2.path1;Name=FBgn0050350.2;Dir=indeterminatecoverage=100.0;identity=99.3;matches=971;mismatches=7;indels=0;unknowns=0;Target=FBgn0050350.2 978 1 .;locus=RLOC_00006635
Chr1	stalkie_big_nohaplotig	exon	26129985	26130962	99	-	.	Parent=FBgn0050350.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26129985	26130962	.	-	0	Parent=FBgn0050350.2.mrna1
Chr1	gffcl	locus	26206928	26266446	.	-	.	ID=RLOC_00006636;geneIDs=comp154515_c1_seq1.path1;transcripts=comp154515_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26206928	26266446	.	-	.	ID=comp154515_c1_seq1.mrna1;geneID=comp154515_c1_seq1.path1;Name=comp154515_c1_seq1;Dir=indeterminatecoverage=98.7;identity=97.2;matches=660;mismatches=13;indels=6;unknowns=0;Target=comp154515_c1_seq1 393 283 .;locus=RLOC_00006636
Chr1	stalkie_big_nohaplotig	exon	26206928	26207566	97	-	.	Parent=comp154515_c1_seq1.mrna1;Target=comp154515_c1_seq1 682 46 .
Chr1	stalkie_big_nohaplotig	exon	26237141	26237148	100	-	.	Parent=comp154515_c1_seq1.mrna1;Target=comp154515_c1_seq1 45 38 .
Chr1	stalkie_big_nohaplotig	exon	26259121	26259126	100	-	.	Parent=comp154515_c1_seq1.mrna1;Target=comp154515_c1_seq1 37 32 .
Chr1	stalkie_big_nohaplotig	exon	26266421	26266446	80	-	.	Parent=comp154515_c1_seq1.mrna1;Target=comp154515_c1_seq1 31 10 .
Chr1	stalkie_big_nohaplotig	CDS	26207217	26207327	.	-	0	Parent=comp154515_c1_seq1.mrna1
Chr1	gffcl	locus	26209733	26211622	.	.	.	ID=RLOC_00006637;geneIDs=FBgn0034162.2.path1,comp110609_c0_seq1.path1,comp570428_c0_seq1.path1;transcripts=comp110609_c0_seq1.mrna1,FBgn0034162.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26209733	26210208	.	+	.	ID=comp110609_c0_seq1.mrna1;geneID=comp110609_c0_seq1.path1;Name=comp110609_c0_seq1;Dir=indeterminatecoverage=94.2;identity=96.7;matches=467;mismatches=9;indels=7;unknowns=0;Target=comp110609_c0_seq1 513 31 .;CDS_Target=comp110609_c0_seq1 153 127 .;locus=RLOC_00006637
Chr1	stalkie_big_nohaplotig	exon	26209733	26210208	96	+	.	Parent=comp110609_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26209829	26209849	.	+	0	Parent=comp110609_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26210575	26211622	.	+	.	ID=FBgn0034162.2.mrna1;geneID=FBgn0034162.2.path1;Name=FBgn0034162.2;Dir=sensecoverage=99.8;identity=99.3;matches=604;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006637
Chr1	stalkie_big_nohaplotig	exon	26210575	26210607	96	+	.	Parent=FBgn0034162.2.mrna1;Target=FBgn0034162.2 2 34 +
Chr1	stalkie_big_nohaplotig	exon	26210978	26211325	99	+	.	Parent=FBgn0034162.2.mrna1;Target=FBgn0034162.2 35 382 +
Chr1	stalkie_big_nohaplotig	exon	26211396	26211622	99	+	.	Parent=FBgn0034162.2.mrna1;Target=FBgn0034162.2 383 609 +
Chr1	stalkie_big_nohaplotig	CDS	26210577	26210607	.	+	0	Parent=FBgn0034162.2.mrna1;Target=FBgn0034162.2 4 34 +
Chr1	stalkie_big_nohaplotig	CDS	26210978	26211325	.	+	2	Parent=FBgn0034162.2.mrna1;Target=FBgn0034162.2 35 382 +
Chr1	stalkie_big_nohaplotig	CDS	26211396	26211622	.	+	2	Parent=FBgn0034162.2.mrna1;Target=FBgn0034162.2 383 609 +
Chr1	gffcl	locus	26211948	26215067	.	+	.	ID=RLOC_00006638;geneIDs=comp160111_c0_seq1.path1;transcripts=comp160111_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26211948	26215067	.	+	.	ID=comp160111_c0_seq1.mrna1;geneID=comp160111_c0_seq1.path1;Name=comp160111_c0_seq1;Dir=indeterminatecoverage=100.0;identity=89.8;matches=2036;mismatches=101;indels=131;unknowns=0;Target=comp160111_c0_seq1 1052 1017 .;locus=RLOC_00006638
Chr1	stalkie_big_nohaplotig	exon	26211948	26212615	96	+	.	Parent=comp160111_c0_seq1.mrna1;Target=comp160111_c0_seq1 668 1 .
Chr1	stalkie_big_nohaplotig	exon	26213203	26213736	79	+	.	Parent=comp160111_c0_seq1.mrna1;Target=comp160111_c0_seq1 1186 669 .
Chr1	stalkie_big_nohaplotig	exon	26213960	26213966	100	+	.	Parent=comp160111_c0_seq1.mrna1;Target=comp160111_c0_seq1 1193 1187 .
Chr1	stalkie_big_nohaplotig	exon	26214017	26214286	67	+	.	Parent=comp160111_c0_seq1.mrna1;Target=comp160111_c0_seq1 1430 1194 .
Chr1	stalkie_big_nohaplotig	exon	26214320	26215067	99	+	.	Parent=comp160111_c0_seq1.mrna1;Target=comp160111_c0_seq1 2307 1560 .
Chr1	stalkie_big_nohaplotig	CDS	26213570	26213605	.	+	0	Parent=comp160111_c0_seq1.mrna1
Chr1	gffcl	locus	26286637	26287721	.	+	.	ID=RLOC_00006639;geneIDs=FBgn0035308.1.path2;transcripts=FBgn0035308.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	26286637	26287721	.	+	.	ID=FBgn0035308.1.mrna2;geneID=FBgn0035308.1.path2;Name=FBgn0035308.1;Dir=sensecoverage=29.3;identity=99.8;matches=962;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006639
Chr1	stalkie_big_nohaplotig	exon	26286637	26286934	100	+	.	Parent=FBgn0035308.1.mrna2;Target=FBgn0035308.1 2325 2622 +
Chr1	stalkie_big_nohaplotig	exon	26287056	26287721	99	+	.	Parent=FBgn0035308.1.mrna2;Target=FBgn0035308.1 2623 3288 +
Chr1	stalkie_big_nohaplotig	CDS	26286637	26286934	.	+	2	Parent=FBgn0035308.1.mrna2;Target=FBgn0035308.1 2325 2622 +
Chr1	stalkie_big_nohaplotig	CDS	26287056	26287721	.	+	1	Parent=FBgn0035308.1.mrna2;Target=FBgn0035308.1 2623 3288 +
Chr1	gffcl	locus	26301818	26302201	.	+	.	ID=RLOC_00006640;geneIDs=FBgn0052311.1.path1;transcripts=FBgn0052311.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26301818	26302201	.	+	.	ID=FBgn0052311.1.mrna1;geneID=FBgn0052311.1.path1;Name=FBgn0052311.1;Dir=indeterminatecoverage=3.9;identity=99.7;matches=383;mismatches=1;indels=0;unknowns=0;Target=FBgn0052311.1 384 1 .;locus=RLOC_00006640
Chr1	stalkie_big_nohaplotig	exon	26301818	26302201	99	+	.	Parent=FBgn0052311.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26301818	26302201	.	+	0	Parent=FBgn0052311.1.mrna1
Chr1	gffcl	locus	26340535	26342692	.	-	.	ID=RLOC_00006641;geneIDs=FBgn0035423.2.path1;transcripts=FBgn0035423.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26340535	26342692	.	-	.	ID=FBgn0035423.2.mrna1;geneID=FBgn0035423.2.path1;Name=FBgn0035423.2;Dir=sensecoverage=100.0;identity=100.0;matches=366;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006641
Chr1	stalkie_big_nohaplotig	exon	26340535	26340678	100	-	.	Parent=FBgn0035423.2.mrna1;Target=FBgn0035423.2 223 366 +
Chr1	stalkie_big_nohaplotig	exon	26340753	26340910	100	-	.	Parent=FBgn0035423.2.mrna1;Target=FBgn0035423.2 65 222 +
Chr1	stalkie_big_nohaplotig	exon	26342629	26342692	100	-	.	Parent=FBgn0035423.2.mrna1;Target=FBgn0035423.2 1 64 +
Chr1	stalkie_big_nohaplotig	CDS	26340535	26340678	.	-	0	Parent=FBgn0035423.2.mrna1;Target=FBgn0035423.2 223 366 +
Chr1	stalkie_big_nohaplotig	CDS	26340753	26340910	.	-	2	Parent=FBgn0035423.2.mrna1;Target=FBgn0035423.2 65 222 +
Chr1	stalkie_big_nohaplotig	CDS	26342629	26342692	.	-	0	Parent=FBgn0035423.2.mrna1;Target=FBgn0035423.2 1 64 +
Chr1	gffcl	locus	26345277	26346532	.	-	.	ID=RLOC_00006642;geneIDs=FBgn0035405.2.path1;transcripts=FBgn0035405.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26345277	26346532	.	-	.	ID=FBgn0035405.2.mrna1;geneID=FBgn0035405.2.path1;Name=FBgn0035405.2;Dir=sensecoverage=100.0;identity=99.4;matches=1190;mismatches=7;indels=0;unknowns=0;locus=RLOC_00006642
Chr1	stalkie_big_nohaplotig	exon	26345277	26346017	99	-	.	Parent=FBgn0035405.2.mrna1;Target=FBgn0035405.2 457 1197 +
Chr1	stalkie_big_nohaplotig	exon	26346077	26346532	98	-	.	Parent=FBgn0035405.2.mrna1;Target=FBgn0035405.2 1 456 +
Chr1	stalkie_big_nohaplotig	CDS	26345277	26346017	.	-	0	Parent=FBgn0035405.2.mrna1;Target=FBgn0035405.2 457 1197 +
Chr1	stalkie_big_nohaplotig	CDS	26346077	26346532	.	-	0	Parent=FBgn0035405.2.mrna1;Target=FBgn0035405.2 1 456 +
Chr1	gffcl	locus	26349654	26351128	.	-	.	ID=RLOC_00006643;geneIDs=FBgn0035405.1.path1;transcripts=FBgn0035405.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26349654	26351128	.	-	.	ID=FBgn0035405.1.mrna1;geneID=FBgn0035405.1.path1;Name=FBgn0035405.1;Dir=sensecoverage=100.0;identity=99.4;matches=1402;mismatches=7;indels=1;unknowns=0;Target=FBgn0035405.1 3 26 +;locus=RLOC_00006643
Chr1	stalkie_big_nohaplotig	exon	26349654	26350634	99	-	.	Parent=FBgn0035405.1.mrna1;Target=FBgn0035405.1 430 1410 +
Chr1	stalkie_big_nohaplotig	exon	26350701	26351128	99	-	.	Parent=FBgn0035405.1.mrna1;Target=FBgn0035405.1 1 429 +
Chr1	stalkie_big_nohaplotig	CDS	26351104	26351126	.	-	0	Parent=FBgn0035405.1.mrna1
Chr1	gffcl	locus	26352828	26355261	.	+	.	ID=RLOC_00006644;geneIDs=FBgn0035404.1.path1;transcripts=FBgn0035404.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26352828	26355261	.	+	.	ID=FBgn0035404.1.mrna1;geneID=FBgn0035404.1.path1;Name=FBgn0035404.1;Dir=sensecoverage=100.0;identity=99.0;matches=820;mismatches=8;indels=0;unknowns=0;locus=RLOC_00006644
Chr1	stalkie_big_nohaplotig	exon	26352828	26352927	100	+	.	Parent=FBgn0035404.1.mrna1;Target=FBgn0035404.1 1 100 +
Chr1	stalkie_big_nohaplotig	exon	26352981	26353052	95	+	.	Parent=FBgn0035404.1.mrna1;Target=FBgn0035404.1 101 172 +
Chr1	stalkie_big_nohaplotig	exon	26353110	26353603	99	+	.	Parent=FBgn0035404.1.mrna1;Target=FBgn0035404.1 173 666 +
Chr1	stalkie_big_nohaplotig	exon	26355100	26355261	99	+	.	Parent=FBgn0035404.1.mrna1;Target=FBgn0035404.1 667 828 +
Chr1	stalkie_big_nohaplotig	CDS	26352828	26352927	.	+	0	Parent=FBgn0035404.1.mrna1;Target=FBgn0035404.1 1 100 +
Chr1	stalkie_big_nohaplotig	CDS	26352981	26353052	.	+	2	Parent=FBgn0035404.1.mrna1;Target=FBgn0035404.1 101 172 +
Chr1	stalkie_big_nohaplotig	CDS	26353110	26353603	.	+	2	Parent=FBgn0035404.1.mrna1;Target=FBgn0035404.1 173 666 +
Chr1	stalkie_big_nohaplotig	CDS	26355100	26355261	.	+	0	Parent=FBgn0035404.1.mrna1;Target=FBgn0035404.1 667 828 +
Chr1	gffcl	locus	26356349	26357638	.	+	.	ID=RLOC_00006645;geneIDs=comp162222_c1_seq1.path1;transcripts=comp162222_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26356349	26357638	.	+	.	ID=comp162222_c1_seq1.mrna1;geneID=comp162222_c1_seq1.path1;Name=comp162222_c1_seq1;Dir=indeterminatecoverage=99.9;identity=97.6;matches=1275;mismatches=14;indels=17;unknowns=0;Target=comp162222_c1_seq1 1306 2 .;CDS_Target=comp162222_c1_seq1 377 285 .;locus=RLOC_00006645
Chr1	stalkie_big_nohaplotig	exon	26356349	26357638	97	+	.	Parent=comp162222_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26356632	26356724	.	+	0	Parent=comp162222_c1_seq1.mrna1
Chr1	gffcl	locus	26362063	26362507	.	+	.	ID=RLOC_00006646;geneIDs=comp116148_c0_seq1.path1;transcripts=comp116148_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26362063	26362507	.	+	.	ID=comp116148_c0_seq1.mrna1;geneID=comp116148_c0_seq1.path1;Name=comp116148_c0_seq1;Dir=indeterminatecoverage=97.0;identity=99.1;matches=444;mismatches=1;indels=3;unknowns=0;Target=comp116148_c0_seq1 462 15 .;CDS_Target=comp116148_c0_seq1 87 16 .;locus=RLOC_00006646
Chr1	stalkie_big_nohaplotig	exon	26362063	26362507	99	+	.	Parent=comp116148_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26362064	26362135	.	+	0	Parent=comp116148_c0_seq1.mrna1
Chr1	gffcl	locus	26384273	26385549	.	-	.	ID=RLOC_00006647;geneIDs=comp149292_c0_seq1.path1;transcripts=comp149292_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26384273	26385549	.	-	.	ID=comp149292_c0_seq1.mrna1;geneID=comp149292_c0_seq1.path1;Name=comp149292_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.1;matches=1135;mismatches=47;indels=50;unknowns=0;locus=RLOC_00006647
Chr1	stalkie_big_nohaplotig	exon	26384273	26385011	95	-	.	Parent=comp149292_c0_seq1.mrna1;Target=comp149292_c0_seq1 1215 503 .
Chr1	stalkie_big_nohaplotig	exon	26385060	26385205	93	-	.	Parent=comp149292_c0_seq1.mrna1;Target=comp149292_c0_seq1 495 350 .
Chr1	stalkie_big_nohaplotig	exon	26385227	26385549	85	-	.	Parent=comp149292_c0_seq1.mrna1;Target=comp149292_c0_seq1 347 1 .
Chr1	stalkie_big_nohaplotig	CDS	26385009	26385011	.	-	1	Parent=comp149292_c0_seq1.mrna1;Target=comp149292_c0_seq1 505 503 .
Chr1	stalkie_big_nohaplotig	CDS	26385060	26385157	.	-	0	Parent=comp149292_c0_seq1.mrna1;Target=comp149292_c0_seq1 495 398 .
Chr1	gffcl	locus	26386526	26386924	.	+	.	ID=RLOC_00006648;geneIDs=comp145351_c0_seq1.path1;transcripts=comp145351_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26386526	26386924	.	+	.	ID=comp145351_c0_seq1.mrna1;geneID=comp145351_c0_seq1.path1;Name=comp145351_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.1;matches=390;mismatches=9;indels=11;unknowns=0;Target=comp145351_c0_seq1 410 1 .;CDS_Target=comp145351_c0_seq1 369 235 .;locus=RLOC_00006648
Chr1	stalkie_big_nohaplotig	exon	26386526	26386924	95	+	.	Parent=comp145351_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26386760	26386890	.	+	0	Parent=comp145351_c0_seq1.mrna1
Chr1	gffcl	locus	26394711	26395718	.	+	.	ID=RLOC_00006649;geneIDs=comp156096_c0_seq1.path1;transcripts=comp156096_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26394711	26395718	.	+	.	ID=comp156096_c0_seq1.mrna1;geneID=comp156096_c0_seq1.path1;Name=comp156096_c0_seq1;Dir=antisensecoverage=100.0;identity=97.3;matches=356;mismatches=7;indels=3;unknowns=0;locus=RLOC_00006649
Chr1	stalkie_big_nohaplotig	exon	26394711	26394947	97	+	.	Parent=comp156096_c0_seq1.mrna1;Target=comp156096_c0_seq1 127 366 -
Chr1	stalkie_big_nohaplotig	exon	26395593	26395718	96	+	.	Parent=comp156096_c0_seq1.mrna1;Target=comp156096_c0_seq1 1 126 -
Chr1	stalkie_big_nohaplotig	CDS	26394713	26394947	.	+	0	Parent=comp156096_c0_seq1.mrna1;Target=comp156096_c0_seq1 127 364 .
Chr1	stalkie_big_nohaplotig	CDS	26395593	26395717	.	+	2	Parent=comp156096_c0_seq1.mrna1;Target=comp156096_c0_seq1 2 126 .
Chr1	gffcl	locus	26406096	26406327	.	+	.	ID=RLOC_00006650;geneIDs=comp151260_c0_seq1.path2;transcripts=comp151260_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	26406096	26406327	.	+	.	ID=comp151260_c0_seq1.mrna2;geneID=comp151260_c0_seq1.path2;Name=comp151260_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.7;matches=222;mismatches=10;indels=0;unknowns=0;Target=comp151260_c0_seq1 232 1 .;CDS_Target=comp151260_c0_seq1 109 2 .;locus=RLOC_00006650
Chr1	stalkie_big_nohaplotig	exon	26406096	26406327	95	+	.	Parent=comp151260_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	26406097	26406204	.	+	0	Parent=comp151260_c0_seq1.mrna2
Chr1	gffcl	locus	26434815	26435128	.	-	.	ID=RLOC_00006651;geneIDs=comp327017_c0_seq1.path1;transcripts=comp327017_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26434815	26435128	.	-	.	ID=comp327017_c0_seq1.mrna1;geneID=comp327017_c0_seq1.path1;Name=comp327017_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=313;mismatches=1;indels=0;unknowns=0;Target=comp327017_c0_seq1 314 1 .;CDS_Target=comp327017_c0_seq1 85 47 .;locus=RLOC_00006651
Chr1	stalkie_big_nohaplotig	exon	26434815	26435128	99	-	.	Parent=comp327017_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26435044	26435082	.	-	0	Parent=comp327017_c0_seq1.mrna1
Chr1	gffcl	locus	26436310	26436789	.	-	.	ID=RLOC_00006652;geneIDs=comp147305_c0_seq1.path1;transcripts=comp147305_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26436310	26436789	.	-	.	ID=comp147305_c0_seq1.mrna1;geneID=comp147305_c0_seq1.path1;Name=comp147305_c0_seq1;Dir=indeterminatecoverage=94.5;identity=96.9;matches=466;mismatches=14;indels=1;unknowns=0;Target=comp147305_c0_seq1 481 1 .;CDS_Target=comp147305_c0_seq1 233 3 .;locus=RLOC_00006652
Chr1	stalkie_big_nohaplotig	exon	26436310	26436789	96	-	.	Parent=comp147305_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26436557	26436787	.	-	0	Parent=comp147305_c0_seq1.mrna1
Chr1	gffcl	locus	26446985	26447216	.	-	.	ID=RLOC_00006653;geneIDs=comp151260_c0_seq1.path1;transcripts=comp151260_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26446985	26447216	.	-	.	ID=comp151260_c0_seq1.mrna1;geneID=comp151260_c0_seq1.path1;Name=comp151260_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.1;matches=223;mismatches=9;indels=0;unknowns=0;Target=comp151260_c0_seq1 232 1 .;CDS_Target=comp151260_c0_seq1 210 1 .;locus=RLOC_00006653
Chr1	stalkie_big_nohaplotig	exon	26446985	26447216	96	-	.	Parent=comp151260_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26447007	26447216	.	-	0	Parent=comp151260_c0_seq1.mrna1
Chr1	gffcl	locus	26466951	26467851	.	+	.	ID=RLOC_00006654;geneIDs=comp152936_c0_seq1.path1;transcripts=comp152936_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26466951	26467851	.	+	.	ID=comp152936_c0_seq1.mrna1;geneID=comp152936_c0_seq1.path1;Name=comp152936_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=894;mismatches=7;indels=0;unknowns=0;Target=comp152936_c0_seq1 901 1 .;CDS_Target=comp152936_c0_seq1 854 738 .;locus=RLOC_00006654
Chr1	stalkie_big_nohaplotig	exon	26466951	26467851	99	+	.	Parent=comp152936_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26467688	26467804	.	+	0	Parent=comp152936_c0_seq1.mrna1
Chr1	gffcl	locus	26515632	26516110	.	-	.	ID=RLOC_00006655;geneIDs=comp157122_c0_seq1.path2;transcripts=comp157122_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	26515632	26516110	.	-	.	ID=comp157122_c0_seq1.mrna2;geneID=comp157122_c0_seq1.path2;Name=comp157122_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=472;mismatches=7;indels=1;unknowns=0;Target=comp157122_c0_seq1 480 1 .;CDS_Target=comp157122_c0_seq1 480 244 .;locus=RLOC_00006655
Chr1	stalkie_big_nohaplotig	exon	26515632	26516110	98	-	.	Parent=comp157122_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	26515632	26515868	.	-	0	Parent=comp157122_c0_seq1.mrna2
Chr1	gffcl	locus	26560626	26561220	.	+	.	ID=RLOC_00006656;geneIDs=comp143590_c0_seq1.path2;transcripts=comp143590_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	26560626	26561220	.	+	.	ID=comp143590_c0_seq1.mrna2;geneID=comp143590_c0_seq1.path2;Name=comp143590_c0_seq1;Dir=indeterminatecoverage=91.1;identity=86.5;matches=473;mismatches=34;indels=40;unknowns=0;Target=comp143590_c0_seq1 74 54 .;locus=RLOC_00006656
Chr1	stalkie_big_nohaplotig	exon	26560626	26560875	93	+	.	Parent=comp143590_c0_seq1.mrna2;Target=comp143590_c0_seq1 304 52 .
Chr1	stalkie_big_nohaplotig	exon	26560927	26561220	80	+	.	Parent=comp143590_c0_seq1.mrna2;Target=comp143590_c0_seq1 582 326 .
Chr1	stalkie_big_nohaplotig	CDS	26560628	26560648	.	+	0	Parent=comp143590_c0_seq1.mrna2
Chr1	gffcl	locus	26569392	26572057	.	+	.	ID=RLOC_00006657;geneIDs=comp58912_c0_seq1.path1;transcripts=comp58912_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26569392	26572057	.	+	.	ID=comp58912_c0_seq1.mrna1;geneID=comp58912_c0_seq1.path1;Name=comp58912_c0_seq1;Dir=antisensecoverage=97.7;identity=99.8;matches=806;mismatches=1;indels=1;unknowns=0;locus=RLOC_00006657
Chr1	stalkie_big_nohaplotig	exon	26569392	26569544	98	+	.	Parent=comp58912_c0_seq1.mrna1;Target=comp58912_c0_seq1 674 827 -
Chr1	stalkie_big_nohaplotig	exon	26571348	26571509	100	+	.	Parent=comp58912_c0_seq1.mrna1;Target=comp58912_c0_seq1 512 673 -
Chr1	stalkie_big_nohaplotig	exon	26571566	26572057	100	+	.	Parent=comp58912_c0_seq1.mrna1;Target=comp58912_c0_seq1 20 511 -
Chr1	stalkie_big_nohaplotig	CDS	26571354	26571509	.	+	0	Parent=comp58912_c0_seq1.mrna1;Target=comp58912_c0_seq1 512 667 .
Chr1	stalkie_big_nohaplotig	CDS	26571566	26571745	.	+	0	Parent=comp58912_c0_seq1.mrna1;Target=comp58912_c0_seq1 332 511 .
Chr1	gffcl	locus	26572245	26572773	.	+	.	ID=RLOC_00006658;geneIDs=comp146172_c0_seq1.path1;transcripts=comp146172_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26572245	26572773	.	+	.	ID=comp146172_c0_seq1.mrna1;geneID=comp146172_c0_seq1.path1;Name=comp146172_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.0;matches=318;mismatches=22;indels=2;unknowns=0;locus=RLOC_00006658
Chr1	stalkie_big_nohaplotig	exon	26572245	26572304	98	+	.	Parent=comp146172_c0_seq1.mrna1;Target=comp146172_c0_seq1 60 1 .
Chr1	stalkie_big_nohaplotig	exon	26572494	26572773	91	+	.	Parent=comp146172_c0_seq1.mrna1;Target=comp146172_c0_seq1 342 61 .
Chr1	stalkie_big_nohaplotig	CDS	26572247	26572304	.	+	0	Parent=comp146172_c0_seq1.mrna1;Target=comp146172_c0_seq1 60 3 .
Chr1	stalkie_big_nohaplotig	CDS	26572494	26572535	.	+	2	Parent=comp146172_c0_seq1.mrna1;Target=comp146172_c0_seq1 104 61 .
Chr1	gffcl	locus	26582713	26583213	.	+	.	ID=RLOC_00006660;geneIDs=FBgn0038175.1.path1;transcripts=FBgn0038175.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26582713	26583213	.	+	.	ID=FBgn0038175.1.mrna1;geneID=FBgn0038175.1.path1;Name=FBgn0038175.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=499;mismatches=2;indels=0;unknowns=0;Target=FBgn0038175.1 501 1 .;locus=RLOC_00006660
Chr1	stalkie_big_nohaplotig	exon	26582713	26583213	99	+	.	Parent=FBgn0038175.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26582713	26583213	.	+	0	Parent=FBgn0038175.1.mrna1
Chr1	gffcl	locus	26584566	26591514	.	-	.	ID=RLOC_00006661;geneIDs=FBgn0035410.1.path1;transcripts=FBgn0035410.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26584566	26591514	.	-	.	ID=FBgn0035410.1.mrna1;geneID=FBgn0035410.1.path1;Name=FBgn0035410.1;Dir=sensecoverage=99.9;identity=99.5;matches=4236;mismatches=21;indels=0;unknowns=0;locus=RLOC_00006661
Chr1	stalkie_big_nohaplotig	exon	26584566	26586580	99	-	.	Parent=FBgn0035410.1.mrna1;Target=FBgn0035410.1 2246 4260 +
Chr1	stalkie_big_nohaplotig	exon	26586666	26588813	99	-	.	Parent=FBgn0035410.1.mrna1;Target=FBgn0035410.1 98 2245 +
Chr1	stalkie_big_nohaplotig	exon	26591421	26591514	100	-	.	Parent=FBgn0035410.1.mrna1;Target=FBgn0035410.1 4 97 +
Chr1	stalkie_big_nohaplotig	CDS	26584566	26586580	.	-	2	Parent=FBgn0035410.1.mrna1;Target=FBgn0035410.1 2246 4260 +
Chr1	stalkie_big_nohaplotig	CDS	26586666	26588813	.	-	2	Parent=FBgn0035410.1.mrna1;Target=FBgn0035410.1 98 2245 +
Chr1	stalkie_big_nohaplotig	CDS	26591421	26591514	.	-	0	Parent=FBgn0035410.1.mrna1;Target=FBgn0035410.1 4 97 +
Chr1	gffcl	locus	26608443	26626001	.	+	.	ID=RLOC_00006662;geneIDs=FBgn0035308.1.path1;transcripts=FBgn0035308.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26608443	26626001	.	+	.	ID=FBgn0035308.1.mrna1;geneID=FBgn0035308.1.path1;Name=FBgn0035308.1;Dir=sensecoverage=70.7;identity=99.7;matches=2318;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006662
Chr1	stalkie_big_nohaplotig	exon	26608443	26608633	100	+	.	Parent=FBgn0035308.1.mrna1;Target=FBgn0035308.1 1 191 +
Chr1	stalkie_big_nohaplotig	exon	26613431	26613623	99	+	.	Parent=FBgn0035308.1.mrna1;Target=FBgn0035308.1 192 384 +
Chr1	stalkie_big_nohaplotig	exon	26613717	26613830	100	+	.	Parent=FBgn0035308.1.mrna1;Target=FBgn0035308.1 385 498 +
Chr1	stalkie_big_nohaplotig	exon	26613937	26614111	99	+	.	Parent=FBgn0035308.1.mrna1;Target=FBgn0035308.1 499 673 +
Chr1	stalkie_big_nohaplotig	exon	26620324	26621124	99	+	.	Parent=FBgn0035308.1.mrna1;Target=FBgn0035308.1 674 1474 +
Chr1	stalkie_big_nohaplotig	exon	26621585	26621949	100	+	.	Parent=FBgn0035308.1.mrna1;Target=FBgn0035308.1 1475 1839 +
Chr1	stalkie_big_nohaplotig	exon	26625517	26626001	99	+	.	Parent=FBgn0035308.1.mrna1;Target=FBgn0035308.1 1840 2324 +
Chr1	stalkie_big_nohaplotig	CDS	26608443	26608633	.	+	0	Parent=FBgn0035308.1.mrna1;Target=FBgn0035308.1 1 191 +
Chr1	stalkie_big_nohaplotig	CDS	26613431	26613623	.	+	1	Parent=FBgn0035308.1.mrna1;Target=FBgn0035308.1 192 384 +
Chr1	stalkie_big_nohaplotig	CDS	26613717	26613830	.	+	0	Parent=FBgn0035308.1.mrna1;Target=FBgn0035308.1 385 498 +
Chr1	stalkie_big_nohaplotig	CDS	26613937	26614111	.	+	0	Parent=FBgn0035308.1.mrna1;Target=FBgn0035308.1 499 673 +
Chr1	stalkie_big_nohaplotig	CDS	26620324	26621124	.	+	2	Parent=FBgn0035308.1.mrna1;Target=FBgn0035308.1 674 1474 +
Chr1	stalkie_big_nohaplotig	CDS	26621585	26621949	.	+	2	Parent=FBgn0035308.1.mrna1;Target=FBgn0035308.1 1475 1839 +
Chr1	stalkie_big_nohaplotig	CDS	26625517	26626001	.	+	0	Parent=FBgn0035308.1.mrna1;Target=FBgn0035308.1 1840 2324 +
Chr1	gffcl	locus	26630289	26631767	.	-	.	ID=RLOC_00006663;geneIDs=FBgn0052281.1.path1;transcripts=FBgn0052281.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26630289	26631767	.	-	.	ID=FBgn0052281.1.mrna1;geneID=FBgn0052281.1.path1;Name=FBgn0052281.1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1465;mismatches=9;indels=10;unknowns=0;Target=FBgn0052281.1 1479 1 .;locus=RLOC_00006663
Chr1	stalkie_big_nohaplotig	exon	26630289	26631767	98	-	.	Parent=FBgn0052281.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26630289	26631767	.	-	0	Parent=FBgn0052281.1.mrna1
Chr1	gffcl	locus	26636170	26638191	.	-	.	ID=RLOC_00006664;geneIDs=FBgn0004380.1.path1;transcripts=FBgn0004380.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26636170	26638191	.	-	.	ID=FBgn0004380.1.mrna1;geneID=FBgn0004380.1.path1;Name=FBgn0004380.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=2006;mismatches=16;indels=0;unknowns=0;Target=FBgn0004380.1 2022 1 .;locus=RLOC_00006664
Chr1	stalkie_big_nohaplotig	exon	26636170	26638191	99	-	.	Parent=FBgn0004380.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26636170	26638191	.	-	0	Parent=FBgn0004380.1.mrna1
Chr1	gffcl	locus	26640191	26640765	.	-	.	ID=RLOC_00006665;geneIDs=comp143590_c0_seq1.path1;transcripts=comp143590_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26640191	26640765	.	-	.	ID=comp143590_c0_seq1.mrna1;geneID=comp143590_c0_seq1.path1;Name=comp143590_c0_seq1;Dir=indeterminatecoverage=87.5;identity=87.6;matches=460;mismatches=26;indels=39;unknowns=0;Target=comp143590_c0_seq1 430 347 .;locus=RLOC_00006665
Chr1	stalkie_big_nohaplotig	exon	26640191	26640483	80	-	.	Parent=comp143590_c0_seq1.mrna1;Target=comp143590_c0_seq1 582 327 .
Chr1	stalkie_big_nohaplotig	exon	26640536	26640765	96	-	.	Parent=comp143590_c0_seq1.mrna1;Target=comp143590_c0_seq1 304 73 .
Chr1	stalkie_big_nohaplotig	CDS	26640378	26640463	.	-	0	Parent=comp143590_c0_seq1.mrna1
Chr1	gffcl	locus	26681771	26685169	.	+	.	ID=RLOC_00006666;geneIDs=FBgn0016031.1.path1;transcripts=FBgn0016031.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26681771	26685169	.	+	.	ID=FBgn0016031.1.mrna1;geneID=FBgn0016031.1.path1;Name=FBgn0016031.1;Dir=sensecoverage=100.0;identity=99.3;matches=1999;mismatches=14;indels=0;unknowns=0;locus=RLOC_00006666
Chr1	stalkie_big_nohaplotig	exon	26681771	26682063	100	+	.	Parent=FBgn0016031.1.mrna1;Target=FBgn0016031.1 1 293 +
Chr1	stalkie_big_nohaplotig	exon	26683066	26683182	99	+	.	Parent=FBgn0016031.1.mrna1;Target=FBgn0016031.1 294 410 +
Chr1	stalkie_big_nohaplotig	exon	26683567	26685169	99	+	.	Parent=FBgn0016031.1.mrna1;Target=FBgn0016031.1 411 2013 +
Chr1	stalkie_big_nohaplotig	CDS	26681771	26682063	.	+	0	Parent=FBgn0016031.1.mrna1;Target=FBgn0016031.1 1 293 +
Chr1	stalkie_big_nohaplotig	CDS	26683066	26683182	.	+	1	Parent=FBgn0016031.1.mrna1;Target=FBgn0016031.1 294 410 +
Chr1	stalkie_big_nohaplotig	CDS	26683567	26685169	.	+	1	Parent=FBgn0016031.1.mrna1;Target=FBgn0016031.1 411 2013 +
Chr1	gffcl	locus	26730066	26730691	.	-	.	ID=RLOC_00006667;geneIDs=comp143750_c0_seq1.path1;transcripts=comp143750_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26730066	26730691	.	-	.	ID=comp143750_c0_seq1.mrna1;geneID=comp143750_c0_seq1.path1;Name=comp143750_c0_seq1;Dir=antisensecoverage=98.5;identity=99.3;matches=531;mismatches=4;indels=0;unknowns=0;Target=comp143750_c0_seq1 293 463 .;locus=RLOC_00006667
Chr1	stalkie_big_nohaplotig	exon	26730066	26730340	99	-	.	Parent=comp143750_c0_seq1.mrna1;Target=comp143750_c0_seq1 3 277 -
Chr1	stalkie_big_nohaplotig	exon	26730432	26730691	99	-	.	Parent=comp143750_c0_seq1.mrna1;Target=comp143750_c0_seq1 278 537 -
Chr1	stalkie_big_nohaplotig	CDS	26730447	26730617	.	-	0	Parent=comp143750_c0_seq1.mrna1
Chr1	gffcl	locus	26851274	26852225	.	+	.	ID=RLOC_00006668;geneIDs=comp162853_c0_seq1.path1;transcripts=comp162853_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26851274	26852225	.	+	.	ID=comp162853_c0_seq1.mrna1;geneID=comp162853_c0_seq1.path1;Name=comp162853_c0_seq1;Dir=indeterminatecoverage=68.7;identity=84.6;matches=821;mismatches=109;indels=41;unknowns=0;Target=comp162853_c0_seq1 949 1 .;CDS_Target=comp162853_c0_seq1 622 509 .;locus=RLOC_00006668
Chr1	stalkie_big_nohaplotig	exon	26851274	26852225	84	+	.	Parent=comp162853_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26851777	26851893	.	+	0	Parent=comp162853_c0_seq1.mrna1
Chr1	gffcl	locus	26875009	26876758	.	+	.	ID=RLOC_00006669;geneIDs=FBgn0035449.1.path1;transcripts=FBgn0035449.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26875009	26876758	.	+	.	ID=FBgn0035449.1.mrna1;geneID=FBgn0035449.1.path1;Name=FBgn0035449.1;Dir=sensecoverage=99.5;identity=99.6;matches=1418;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006669
Chr1	stalkie_big_nohaplotig	exon	26875009	26875343	99	+	.	Parent=FBgn0035449.1.mrna1;Target=FBgn0035449.1 8 342 +
Chr1	stalkie_big_nohaplotig	exon	26875411	26875698	100	+	.	Parent=FBgn0035449.1.mrna1;Target=FBgn0035449.1 343 630 +
Chr1	stalkie_big_nohaplotig	exon	26875831	26876080	99	+	.	Parent=FBgn0035449.1.mrna1;Target=FBgn0035449.1 631 880 +
Chr1	stalkie_big_nohaplotig	exon	26876140	26876315	98	+	.	Parent=FBgn0035449.1.mrna1;Target=FBgn0035449.1 881 1056 +
Chr1	stalkie_big_nohaplotig	exon	26876384	26876758	99	+	.	Parent=FBgn0035449.1.mrna1;Target=FBgn0035449.1 1057 1431 +
Chr1	stalkie_big_nohaplotig	CDS	26875011	26875343	.	+	0	Parent=FBgn0035449.1.mrna1;Target=FBgn0035449.1 10 342 +
Chr1	stalkie_big_nohaplotig	CDS	26875411	26875698	.	+	0	Parent=FBgn0035449.1.mrna1;Target=FBgn0035449.1 343 630 +
Chr1	stalkie_big_nohaplotig	CDS	26875831	26876080	.	+	0	Parent=FBgn0035449.1.mrna1;Target=FBgn0035449.1 631 880 +
Chr1	stalkie_big_nohaplotig	CDS	26876140	26876315	.	+	2	Parent=FBgn0035449.1.mrna1;Target=FBgn0035449.1 881 1056 +
Chr1	stalkie_big_nohaplotig	CDS	26876384	26876758	.	+	0	Parent=FBgn0035449.1.mrna1;Target=FBgn0035449.1 1057 1431 +
Chr1	gffcl	locus	26878874	26879158	.	-	.	ID=RLOC_00006670;geneIDs=comp113809_c0_seq1.path1;transcripts=comp113809_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26878874	26879158	.	-	.	ID=comp113809_c0_seq1.mrna1;geneID=comp113809_c0_seq1.path1;Name=comp113809_c0_seq1;Dir=indeterminatecoverage=94.6;identity=98.9;matches=282;mismatches=1;indels=2;unknowns=0;Target=comp113809_c0_seq1 285 3 .;CDS_Target=comp113809_c0_seq1 58 5 .;locus=RLOC_00006670
Chr1	stalkie_big_nohaplotig	exon	26878874	26879158	98	-	.	Parent=comp113809_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26879101	26879156	.	-	0	Parent=comp113809_c0_seq1.mrna1
Chr1	gffcl	locus	26879818	26882628	.	-	.	ID=RLOC_00006671;geneIDs=FBgn0010317.1.path1;transcripts=FBgn0010317.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26879818	26882628	.	-	.	ID=FBgn0010317.1.mrna1;geneID=FBgn0010317.1.path1;Name=FBgn0010317.1;Dir=sensecoverage=100.0;identity=99.8;matches=1039;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006671
Chr1	stalkie_big_nohaplotig	exon	26879818	26880197	99	-	.	Parent=FBgn0010317.1.mrna1;Target=FBgn0010317.1 662 1041 +
Chr1	stalkie_big_nohaplotig	exon	26880263	26880682	99	-	.	Parent=FBgn0010317.1.mrna1;Target=FBgn0010317.1 242 661 +
Chr1	stalkie_big_nohaplotig	exon	26882388	26882628	100	-	.	Parent=FBgn0010317.1.mrna1;Target=FBgn0010317.1 1 241 +
Chr1	stalkie_big_nohaplotig	CDS	26879818	26880197	.	-	2	Parent=FBgn0010317.1.mrna1;Target=FBgn0010317.1 662 1041 +
Chr1	stalkie_big_nohaplotig	CDS	26880263	26880682	.	-	2	Parent=FBgn0010317.1.mrna1;Target=FBgn0010317.1 242 661 +
Chr1	stalkie_big_nohaplotig	CDS	26882388	26882628	.	-	0	Parent=FBgn0010317.1.mrna1;Target=FBgn0010317.1 1 241 +
Chr1	gffcl	locus	26891631	26892679	.	+	.	ID=RLOC_00006673;geneIDs=FBgn0035964.1.path1;transcripts=FBgn0035964.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26891631	26892679	.	+	.	ID=FBgn0035964.1.mrna1;geneID=FBgn0035964.1.path1;Name=FBgn0035964.1;Dir=sensecoverage=100.0;identity=100.0;matches=774;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006673
Chr1	stalkie_big_nohaplotig	exon	26891631	26891783	100	+	.	Parent=FBgn0035964.1.mrna1;Target=FBgn0035964.1 1 153 +
Chr1	stalkie_big_nohaplotig	exon	26891863	26892049	100	+	.	Parent=FBgn0035964.1.mrna1;Target=FBgn0035964.1 154 340 +
Chr1	stalkie_big_nohaplotig	exon	26892110	26892334	100	+	.	Parent=FBgn0035964.1.mrna1;Target=FBgn0035964.1 341 565 +
Chr1	stalkie_big_nohaplotig	exon	26892411	26892519	100	+	.	Parent=FBgn0035964.1.mrna1;Target=FBgn0035964.1 566 674 +
Chr1	stalkie_big_nohaplotig	exon	26892580	26892679	100	+	.	Parent=FBgn0035964.1.mrna1;Target=FBgn0035964.1 675 774 +
Chr1	stalkie_big_nohaplotig	CDS	26891631	26891783	.	+	0	Parent=FBgn0035964.1.mrna1;Target=FBgn0035964.1 1 153 +
Chr1	stalkie_big_nohaplotig	CDS	26891863	26892049	.	+	0	Parent=FBgn0035964.1.mrna1;Target=FBgn0035964.1 154 340 +
Chr1	stalkie_big_nohaplotig	CDS	26892110	26892334	.	+	2	Parent=FBgn0035964.1.mrna1;Target=FBgn0035964.1 341 565 +
Chr1	stalkie_big_nohaplotig	CDS	26892411	26892519	.	+	2	Parent=FBgn0035964.1.mrna1;Target=FBgn0035964.1 566 674 +
Chr1	stalkie_big_nohaplotig	CDS	26892580	26892679	.	+	1	Parent=FBgn0035964.1.mrna1;Target=FBgn0035964.1 675 774 +
Chr1	gffcl	locus	26895981	26896512	.	+	.	ID=RLOC_00006674;geneIDs=FBgn0035692.1.path1;transcripts=FBgn0035692.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26895981	26896512	.	+	.	ID=FBgn0035692.1.mrna1;geneID=FBgn0035692.1.path1;Name=FBgn0035692.1;Dir=sensecoverage=100.0;identity=100.0;matches=375;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006674
Chr1	stalkie_big_nohaplotig	exon	26895981	26896010	100	+	.	Parent=FBgn0035692.1.mrna1;Target=FBgn0035692.1 1 30 +
Chr1	stalkie_big_nohaplotig	exon	26896107	26896225	100	+	.	Parent=FBgn0035692.1.mrna1;Target=FBgn0035692.1 31 149 +
Chr1	stalkie_big_nohaplotig	exon	26896287	26896512	100	+	.	Parent=FBgn0035692.1.mrna1;Target=FBgn0035692.1 150 375 +
Chr1	stalkie_big_nohaplotig	CDS	26895981	26896010	.	+	0	Parent=FBgn0035692.1.mrna1;Target=FBgn0035692.1 1 30 +
Chr1	stalkie_big_nohaplotig	CDS	26896107	26896225	.	+	0	Parent=FBgn0035692.1.mrna1;Target=FBgn0035692.1 31 149 +
Chr1	stalkie_big_nohaplotig	CDS	26896287	26896512	.	+	1	Parent=FBgn0035692.1.mrna1;Target=FBgn0035692.1 150 375 +
Chr1	gffcl	locus	26903762	26906176	.	-	.	ID=RLOC_00006675;geneIDs=FBgn0035690.1.path1;transcripts=FBgn0035690.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	26903762	26906176	.	-	.	ID=FBgn0035690.1.mrna1;geneID=FBgn0035690.1.path1;Name=FBgn0035690.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=2406;mismatches=9;indels=0;unknowns=0;Target=FBgn0035690.1 2415 1 .;locus=RLOC_00006675
Chr1	stalkie_big_nohaplotig	exon	26903762	26906176	99	-	.	Parent=FBgn0035690.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	26903762	26906176	.	-	0	Parent=FBgn0035690.1.mrna1
Chr1	gffcl	locus	27044902	27046411	.	-	.	ID=RLOC_00006676;geneIDs=comp157464_c0_seq1.path1;transcripts=comp157464_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27044902	27046411	.	-	.	ID=comp157464_c0_seq1.mrna1;geneID=comp157464_c0_seq1.path1;Name=comp157464_c0_seq1;Dir=sensecoverage=99.9;identity=98.7;matches=994;mismatches=11;indels=2;unknowns=0;Target=comp157464_c0_seq1 105 182 +;locus=RLOC_00006676
Chr1	stalkie_big_nohaplotig	exon	27044902	27045621	99	-	.	Parent=comp157464_c0_seq1.mrna1;Target=comp157464_c0_seq1 288 1007 +
Chr1	stalkie_big_nohaplotig	exon	27046127	27046411	96	-	.	Parent=comp157464_c0_seq1.mrna1;Target=comp157464_c0_seq1 1 287 +
Chr1	stalkie_big_nohaplotig	CDS	27046232	27046307	.	-	0	Parent=comp157464_c0_seq1.mrna1
Chr1	gffcl	locus	27072196	27085278	.	+	.	ID=RLOC_00006677;geneIDs=FBgn0052423.1.path1;transcripts=FBgn0052423.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27072196	27085278	.	+	.	ID=FBgn0052423.1.mrna1;geneID=FBgn0052423.1.path1;Name=FBgn0052423.1;Dir=indeterminatecoverage=98.5;identity=99.7;matches=701;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006677
Chr1	stalkie_big_nohaplotig	exon	27072196	27072442	100	+	.	Parent=FBgn0052423.1.mrna1;Target=FBgn0052423.1 248 2 .
Chr1	stalkie_big_nohaplotig	exon	27073863	27073921	100	+	.	Parent=FBgn0052423.1.mrna1;Target=FBgn0052423.1 307 249 .
Chr1	stalkie_big_nohaplotig	exon	27074827	27074951	100	+	.	Parent=FBgn0052423.1.mrna1;Target=FBgn0052423.1 432 308 .
Chr1	stalkie_big_nohaplotig	exon	27084940	27085081	98	+	.	Parent=FBgn0052423.1.mrna1;Target=FBgn0052423.1 574 433 .
Chr1	stalkie_big_nohaplotig	exon	27085149	27085278	100	+	.	Parent=FBgn0052423.1.mrna1;Target=FBgn0052423.1 704 575 .
Chr1	stalkie_big_nohaplotig	CDS	27072198	27072442	.	+	0	Parent=FBgn0052423.1.mrna1;Target=FBgn0052423.1 248 4 .
Chr1	stalkie_big_nohaplotig	CDS	27073863	27073921	.	+	1	Parent=FBgn0052423.1.mrna1;Target=FBgn0052423.1 307 249 .
Chr1	stalkie_big_nohaplotig	CDS	27074827	27074951	.	+	2	Parent=FBgn0052423.1.mrna1;Target=FBgn0052423.1 432 308 .
Chr1	stalkie_big_nohaplotig	CDS	27084940	27085081	.	+	0	Parent=FBgn0052423.1.mrna1;Target=FBgn0052423.1 574 433 .
Chr1	stalkie_big_nohaplotig	CDS	27085149	27085276	.	+	2	Parent=FBgn0052423.1.mrna1;Target=FBgn0052423.1 702 575 .
Chr1	gffcl	locus	27091978	27092842	.	-	.	ID=RLOC_00006678;geneIDs=comp159819_c1_seq1.path1;transcripts=comp159819_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27091978	27092842	.	-	.	ID=comp159819_c1_seq1.mrna1;geneID=comp159819_c1_seq1.path1;Name=comp159819_c1_seq1;Dir=indeterminatecoverage=99.3;identity=98.3;matches=853;mismatches=12;indels=3;unknowns=0;Target=comp159819_c1_seq1 873 6 .;CDS_Target=comp159819_c1_seq1 435 391 .;locus=RLOC_00006678
Chr1	stalkie_big_nohaplotig	exon	27091978	27092842	98	-	.	Parent=comp159819_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27092416	27092458	.	-	0	Parent=comp159819_c1_seq1.mrna1
Chr1	gffcl	locus	27094193	27095426	.	+	.	ID=RLOC_00006679;geneIDs=comp159406_c0_seq1.path1;transcripts=comp159406_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27094193	27095426	.	+	.	ID=comp159406_c0_seq1.mrna1;geneID=comp159406_c0_seq1.path1;Name=comp159406_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.0;matches=1211;mismatches=22;indels=15;unknowns=0;Target=comp159406_c0_seq1 1247 1 .;CDS_Target=comp159406_c0_seq1 521 333 .;locus=RLOC_00006679
Chr1	stalkie_big_nohaplotig	exon	27094193	27095426	97	+	.	Parent=comp159406_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27094526	27094708	.	+	0	Parent=comp159406_c0_seq1.mrna1
Chr1	gffcl	locus	27095438	27095928	.	-	.	ID=RLOC_00006680;geneIDs=comp118635_c0_seq1.path1;transcripts=comp118635_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27095438	27095928	.	-	.	ID=comp118635_c0_seq1.mrna1;geneID=comp118635_c0_seq1.path1;Name=comp118635_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=487;mismatches=4;indels=0;unknowns=0;Target=comp118635_c0_seq1 491 1 .;CDS_Target=comp118635_c0_seq1 24 1 .;locus=RLOC_00006680
Chr1	stalkie_big_nohaplotig	exon	27095438	27095928	99	-	.	Parent=comp118635_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27095905	27095928	.	-	0	Parent=comp118635_c0_seq1.mrna1
Chr1	gffcl	locus	27096726	27097610	.	-	.	ID=RLOC_00006681;geneIDs=comp158018_c0_seq1.path1;transcripts=comp158018_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27096726	27097610	.	-	.	ID=comp158018_c0_seq1.mrna1;geneID=comp158018_c0_seq1.path1;Name=comp158018_c0_seq1;Dir=indeterminatecoverage=98.0;identity=93.6;matches=833;mismatches=26;indels=31;unknowns=0;Target=comp158018_c0_seq1 864 1 .;CDS_Target=comp158018_c0_seq1 615 442 .;locus=RLOC_00006681
Chr1	stalkie_big_nohaplotig	exon	27096726	27097610	93	-	.	Parent=comp158018_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27096970	27097143	.	-	0	Parent=comp158018_c0_seq1.mrna1
Chr1	gffcl	locus	27097790	27098863	.	.	.	ID=RLOC_00006682;geneIDs=comp143512_c0_seq1.path1,comp143904_c0_seq1.path1;transcripts=comp143904_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27097790	27098424	.	-	.	ID=comp143904_c0_seq1.mrna1;geneID=comp143904_c0_seq1.path1;Name=comp143904_c0_seq1;Dir=indeterminatecoverage=95.2;identity=97.5;matches=620;mismatches=12;indels=4;unknowns=0;Target=comp143904_c0_seq1 633 1 .;CDS_Target=comp143904_c0_seq1 166 38 .;locus=RLOC_00006682
Chr1	stalkie_big_nohaplotig	exon	27097790	27098424	97	-	.	Parent=comp143904_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27098256	27098387	.	-	0	Parent=comp143904_c0_seq1.mrna1
Chr1	gffcl	locus	27098872	27099275	.	-	.	ID=RLOC_00006683;geneIDs=comp57911_c0_seq1.path1;transcripts=comp57911_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27098872	27099275	.	-	.	ID=comp57911_c0_seq1.mrna1;geneID=comp57911_c0_seq1.path1;Name=comp57911_c0_seq1;Dir=indeterminatecoverage=92.3;identity=99.5;matches=403;mismatches=1;indels=1;unknowns=0;Target=comp57911_c0_seq1 424 20 .;CDS_Target=comp57911_c0_seq1 135 22 .;locus=RLOC_00006683
Chr1	stalkie_big_nohaplotig	exon	27098872	27099275	99	-	.	Parent=comp57911_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27099160	27099273	.	-	0	Parent=comp57911_c0_seq1.mrna1
Chr1	gffcl	locus	27117842	27123433	.	+	.	ID=RLOC_00006684;geneIDs=FBgn0028962.1.path1;transcripts=FBgn0028962.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27117842	27123433	.	+	.	ID=FBgn0028962.1.mrna1;geneID=FBgn0028962.1.path1;Name=FBgn0028962.1;Dir=sensecoverage=100.0;identity=99.4;matches=3029;mismatches=19;indels=0;unknowns=0;locus=RLOC_00006684
Chr1	stalkie_big_nohaplotig	exon	27117842	27118015	99	+	.	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 1 174 +
Chr1	stalkie_big_nohaplotig	exon	27118087	27118260	99	+	.	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 175 348 +
Chr1	stalkie_big_nohaplotig	exon	27118328	27118473	98	+	.	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 349 494 +
Chr1	stalkie_big_nohaplotig	exon	27118536	27118742	98	+	.	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 495 701 +
Chr1	stalkie_big_nohaplotig	exon	27119404	27119548	99	+	.	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 702 846 +
Chr1	stalkie_big_nohaplotig	exon	27120055	27120194	99	+	.	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 847 986 +
Chr1	stalkie_big_nohaplotig	exon	27120249	27121234	99	+	.	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 987 1972 +
Chr1	stalkie_big_nohaplotig	exon	27122060	27122216	100	+	.	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 1973 2129 +
Chr1	stalkie_big_nohaplotig	exon	27122276	27122561	99	+	.	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 2130 2415 +
Chr1	stalkie_big_nohaplotig	exon	27122618	27122838	99	+	.	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 2416 2636 +
Chr1	stalkie_big_nohaplotig	exon	27122964	27123165	99	+	.	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 2637 2838 +
Chr1	stalkie_big_nohaplotig	exon	27123224	27123433	100	+	.	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 2839 3048 +
Chr1	stalkie_big_nohaplotig	CDS	27117842	27118015	.	+	0	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 1 174 +
Chr1	stalkie_big_nohaplotig	CDS	27118087	27118260	.	+	0	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 175 348 +
Chr1	stalkie_big_nohaplotig	CDS	27118328	27118473	.	+	0	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 349 494 +
Chr1	stalkie_big_nohaplotig	CDS	27118536	27118742	.	+	1	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 495 701 +
Chr1	stalkie_big_nohaplotig	CDS	27119404	27119548	.	+	1	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 702 846 +
Chr1	stalkie_big_nohaplotig	CDS	27120055	27120194	.	+	0	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 847 986 +
Chr1	stalkie_big_nohaplotig	CDS	27120249	27121234	.	+	1	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 987 1972 +
Chr1	stalkie_big_nohaplotig	CDS	27122060	27122216	.	+	2	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 1973 2129 +
Chr1	stalkie_big_nohaplotig	CDS	27122276	27122561	.	+	1	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 2130 2415 +
Chr1	stalkie_big_nohaplotig	CDS	27122618	27122838	.	+	0	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 2416 2636 +
Chr1	stalkie_big_nohaplotig	CDS	27122964	27123165	.	+	1	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 2637 2838 +
Chr1	stalkie_big_nohaplotig	CDS	27123224	27123433	.	+	0	Parent=FBgn0028962.1.mrna1;Target=FBgn0028962.1 2839 3048 +
Chr1	gffcl	locus	27124362	27126237	.	-	.	ID=RLOC_00006685;geneIDs=FBgn0263831.1.path1;transcripts=FBgn0263831.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27124362	27126237	.	-	.	ID=FBgn0263831.1.mrna1;geneID=FBgn0263831.1.path1;Name=FBgn0263831.1;Dir=sensecoverage=99.8;identity=96.0;matches=1525;mismatches=26;indels=37;unknowns=0;locus=RLOC_00006685
Chr1	stalkie_big_nohaplotig	exon	27124362	27124905	98	-	.	Parent=FBgn0263831.1.mrna1;Target=FBgn0263831.1 1008 1551 +
Chr1	stalkie_big_nohaplotig	exon	27124966	27125133	98	-	.	Parent=FBgn0263831.1.mrna1;Target=FBgn0263831.1 840 1007 +
Chr1	stalkie_big_nohaplotig	exon	27125190	27125325	98	-	.	Parent=FBgn0263831.1.mrna1;Target=FBgn0263831.1 704 839 +
Chr1	stalkie_big_nohaplotig	exon	27125394	27125547	96	-	.	Parent=FBgn0263831.1.mrna1;Target=FBgn0263831.1 550 703 +
Chr1	stalkie_big_nohaplotig	exon	27125598	27125922	98	-	.	Parent=FBgn0263831.1.mrna1;Target=FBgn0263831.1 225 549 +
Chr1	stalkie_big_nohaplotig	exon	27125977	27126237	83	-	.	Parent=FBgn0263831.1.mrna1;Target=FBgn0263831.1 1 224 +
Chr1	stalkie_big_nohaplotig	CDS	27124362	27124905	.	-	1	Parent=FBgn0263831.1.mrna1;Target=FBgn0263831.1 1008 1551 +
Chr1	stalkie_big_nohaplotig	CDS	27124966	27125133	.	-	1	Parent=FBgn0263831.1.mrna1;Target=FBgn0263831.1 840 1007 +
Chr1	stalkie_big_nohaplotig	CDS	27125190	27125325	.	-	2	Parent=FBgn0263831.1.mrna1;Target=FBgn0263831.1 704 839 +
Chr1	stalkie_big_nohaplotig	CDS	27125394	27125547	.	-	0	Parent=FBgn0263831.1.mrna1;Target=FBgn0263831.1 550 703 +
Chr1	stalkie_big_nohaplotig	CDS	27125598	27125922	.	-	1	Parent=FBgn0263831.1.mrna1;Target=FBgn0263831.1 225 549 +
Chr1	stalkie_big_nohaplotig	CDS	27125977	27126134	.	-	0	Parent=FBgn0263831.1.mrna1;Target=FBgn0263831.1 67 224 +
Chr1	gffcl	locus	27129171	27130268	.	-	.	ID=RLOC_00006686;geneIDs=ORF2175.path1;transcripts=ORF2175.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27129171	27130268	.	-	.	ID=ORF2175.mrna1;geneID=ORF2175.path1;Name=ORF2175;Dir=sensecoverage=100.0;identity=99.3;matches=897;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006686
Chr1	stalkie_big_nohaplotig	exon	27129171	27129747	99	-	.	Parent=ORF2175.mrna1;Target=ORF2175 327 903 +
Chr1	stalkie_big_nohaplotig	exon	27129823	27129979	99	-	.	Parent=ORF2175.mrna1;Target=ORF2175 170 326 +
Chr1	stalkie_big_nohaplotig	exon	27130029	27130179	100	-	.	Parent=ORF2175.mrna1;Target=ORF2175 19 169 +
Chr1	stalkie_big_nohaplotig	exon	27130251	27130268	100	-	.	Parent=ORF2175.mrna1;Target=ORF2175 1 18 +
Chr1	stalkie_big_nohaplotig	CDS	27129171	27129747	.	-	1	Parent=ORF2175.mrna1;Target=ORF2175 327 903 +
Chr1	stalkie_big_nohaplotig	CDS	27129823	27129979	.	-	2	Parent=ORF2175.mrna1;Target=ORF2175 170 326 +
Chr1	stalkie_big_nohaplotig	CDS	27130029	27130179	.	-	0	Parent=ORF2175.mrna1;Target=ORF2175 19 169 +
Chr1	stalkie_big_nohaplotig	CDS	27130251	27130268	.	-	0	Parent=ORF2175.mrna1;Target=ORF2175 1 18 +
Chr1	gffcl	locus	27135775	27136109	.	+	.	ID=RLOC_00006687;geneIDs=comp143870_c0_seq1.path1;transcripts=comp143870_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27135775	27136109	.	+	.	ID=comp143870_c0_seq1.mrna1;geneID=comp143870_c0_seq1.path1;Name=comp143870_c0_seq1;Dir=indeterminatecoverage=92.6;identity=94.4;matches=319;mismatches=16;indels=3;unknowns=0;Target=comp143870_c0_seq1 338 1 .;CDS_Target=comp143870_c0_seq1 289 176 .;locus=RLOC_00006687
Chr1	stalkie_big_nohaplotig	exon	27135775	27136109	94	+	.	Parent=comp143870_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27135947	27136060	.	+	0	Parent=comp143870_c0_seq1.mrna1
Chr1	gffcl	locus	27137119	27145298	.	-	.	ID=RLOC_00006688;geneIDs=FBgn0052423.2.path1;transcripts=FBgn0052423.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27137119	27145298	.	-	.	ID=FBgn0052423.2.mrna1;geneID=FBgn0052423.2.path1;Name=FBgn0052423.2;Dir=sensecoverage=99.6;identity=99.8;matches=954;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006688
Chr1	stalkie_big_nohaplotig	exon	27137119	27137256	100	-	.	Parent=FBgn0052423.2.mrna1;Target=FBgn0052423.2 823 960 +
Chr1	stalkie_big_nohaplotig	exon	27137599	27137763	100	-	.	Parent=FBgn0052423.2.mrna1;Target=FBgn0052423.2 658 822 +
Chr1	stalkie_big_nohaplotig	exon	27138724	27139091	99	-	.	Parent=FBgn0052423.2.mrna1;Target=FBgn0052423.2 290 657 +
Chr1	stalkie_big_nohaplotig	exon	27139168	27139309	100	-	.	Parent=FBgn0052423.2.mrna1;Target=FBgn0052423.2 148 289 +
Chr1	stalkie_big_nohaplotig	exon	27143336	27143457	100	-	.	Parent=FBgn0052423.2.mrna1;Target=FBgn0052423.2 26 147 +
Chr1	stalkie_big_nohaplotig	exon	27145278	27145298	100	-	.	Parent=FBgn0052423.2.mrna1;Target=FBgn0052423.2 5 25 +
Chr1	stalkie_big_nohaplotig	CDS	27137119	27137256	.	-	0	Parent=FBgn0052423.2.mrna1;Target=FBgn0052423.2 823 960 +
Chr1	stalkie_big_nohaplotig	CDS	27137599	27137763	.	-	0	Parent=FBgn0052423.2.mrna1;Target=FBgn0052423.2 658 822 +
Chr1	stalkie_big_nohaplotig	CDS	27138724	27139091	.	-	2	Parent=FBgn0052423.2.mrna1;Target=FBgn0052423.2 290 657 +
Chr1	stalkie_big_nohaplotig	CDS	27139168	27139309	.	-	0	Parent=FBgn0052423.2.mrna1;Target=FBgn0052423.2 148 289 +
Chr1	stalkie_big_nohaplotig	CDS	27143336	27143457	.	-	2	Parent=FBgn0052423.2.mrna1;Target=FBgn0052423.2 26 147 +
Chr1	stalkie_big_nohaplotig	CDS	27145278	27145296	.	-	0	Parent=FBgn0052423.2.mrna1;Target=FBgn0052423.2 7 25 +
Chr1	gffcl	locus	27141117	27141996	.	+	.	ID=RLOC_00006689;geneIDs=comp161488_c0_seq1.path1;transcripts=comp161488_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27141117	27141996	.	+	.	ID=comp161488_c0_seq1.mrna1;geneID=comp161488_c0_seq1.path1;Name=comp161488_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.5;matches=845;mismatches=35;indels=24;unknowns=0;Target=comp161488_c0_seq1 904 1 .;CDS_Target=comp161488_c0_seq1 678 637 .;locus=RLOC_00006689
Chr1	stalkie_big_nohaplotig	exon	27141117	27141996	93	+	.	Parent=comp161488_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27141753	27141781	.	+	0	Parent=comp161488_c0_seq1.mrna1
Chr1	gffcl	locus	27150548	27151235	.	-	.	ID=RLOC_00006690;geneIDs=comp146392_c0_seq1.path1;transcripts=comp146392_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27150548	27151235	.	-	.	ID=comp146392_c0_seq1.mrna1;geneID=comp146392_c0_seq1.path1;Name=comp146392_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=686;mismatches=2;indels=0;unknowns=0;Target=comp146392_c0_seq1 688 1 .;CDS_Target=comp146392_c0_seq1 267 142 .;locus=RLOC_00006690
Chr1	stalkie_big_nohaplotig	exon	27150548	27151235	99	-	.	Parent=comp146392_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27150969	27151094	.	-	0	Parent=comp146392_c0_seq1.mrna1
Chr1	gffcl	locus	27154184	27154519	.	-	.	ID=RLOC_00006691;geneIDs=comp145739_c0_seq1.path1;transcripts=comp145739_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27154184	27154519	.	-	.	ID=comp145739_c0_seq1.mrna1;geneID=comp145739_c0_seq1.path1;Name=comp145739_c0_seq1;Dir=indeterminatecoverage=59.1;identity=96.7;matches=325;mismatches=10;indels=1;unknowns=0;Target=comp145739_c0_seq1 393 59 .;CDS_Target=comp145739_c0_seq1 260 195 .;locus=RLOC_00006691
Chr1	stalkie_big_nohaplotig	exon	27154184	27154519	96	-	.	Parent=comp145739_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27154317	27154382	.	-	0	Parent=comp145739_c0_seq1.mrna1
Chr1	gffcl	locus	27210840	27211949	.	+	.	ID=RLOC_00006692;geneIDs=FBgn0040696.1.path1;transcripts=FBgn0040696.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27210840	27211949	.	+	.	ID=FBgn0040696.1.mrna1;geneID=FBgn0040696.1.path1;Name=FBgn0040696.1;Dir=sensecoverage=87.4;identity=100.0;matches=768;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006692
Chr1	stalkie_big_nohaplotig	exon	27210840	27211220	100	+	.	Parent=FBgn0040696.1.mrna1;Target=FBgn0040696.1 1 381 +
Chr1	stalkie_big_nohaplotig	exon	27211301	27211570	100	+	.	Parent=FBgn0040696.1.mrna1;Target=FBgn0040696.1 382 651 +
Chr1	stalkie_big_nohaplotig	exon	27211833	27211949	100	+	.	Parent=FBgn0040696.1.mrna1;Target=FBgn0040696.1 652 768 +
Chr1	stalkie_big_nohaplotig	CDS	27210840	27211220	.	+	0	Parent=FBgn0040696.1.mrna1;Target=FBgn0040696.1 1 381 +
Chr1	stalkie_big_nohaplotig	CDS	27211301	27211570	.	+	0	Parent=FBgn0040696.1.mrna1;Target=FBgn0040696.1 382 651 +
Chr1	stalkie_big_nohaplotig	CDS	27211833	27211949	.	+	0	Parent=FBgn0040696.1.mrna1;Target=FBgn0040696.1 652 768 +
Chr1	gffcl	locus	27216315	27223509	.	-	.	ID=RLOC_00006693;geneIDs=FBgn0035504.1.path1;transcripts=FBgn0035504.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27216315	27223509	.	-	.	ID=FBgn0035504.1.mrna1;geneID=FBgn0035504.1.path1;Name=FBgn0035504.1;Dir=sensecoverage=100.0;identity=99.8;matches=1563;mismatches=3;indels=0;unknowns=0;locus=RLOC_00006693
Chr1	stalkie_big_nohaplotig	exon	27216315	27216476	99	-	.	Parent=FBgn0035504.1.mrna1;Target=FBgn0035504.1 1405 1566 +
Chr1	stalkie_big_nohaplotig	exon	27217154	27217294	100	-	.	Parent=FBgn0035504.1.mrna1;Target=FBgn0035504.1 1264 1404 +
Chr1	stalkie_big_nohaplotig	exon	27218809	27218946	100	-	.	Parent=FBgn0035504.1.mrna1;Target=FBgn0035504.1 1126 1263 +
Chr1	stalkie_big_nohaplotig	exon	27219019	27219313	99	-	.	Parent=FBgn0035504.1.mrna1;Target=FBgn0035504.1 831 1125 +
Chr1	stalkie_big_nohaplotig	exon	27219384	27219550	100	-	.	Parent=FBgn0035504.1.mrna1;Target=FBgn0035504.1 664 830 +
Chr1	stalkie_big_nohaplotig	exon	27219615	27219817	100	-	.	Parent=FBgn0035504.1.mrna1;Target=FBgn0035504.1 461 663 +
Chr1	stalkie_big_nohaplotig	exon	27219883	27219967	98	-	.	Parent=FBgn0035504.1.mrna1;Target=FBgn0035504.1 376 460 +
Chr1	stalkie_big_nohaplotig	exon	27222992	27223202	100	-	.	Parent=FBgn0035504.1.mrna1;Target=FBgn0035504.1 165 375 +
Chr1	stalkie_big_nohaplotig	exon	27223346	27223509	100	-	.	Parent=FBgn0035504.1.mrna1;Target=FBgn0035504.1 1 164 +
Chr1	stalkie_big_nohaplotig	CDS	27216315	27216476	.	-	0	Parent=FBgn0035504.1.mrna1;Target=FBgn0035504.1 1405 1566 +
Chr1	stalkie_big_nohaplotig	CDS	27217154	27217294	.	-	0	Parent=FBgn0035504.1.mrna1;Target=FBgn0035504.1 1264 1404 +
Chr1	stalkie_big_nohaplotig	CDS	27218809	27218946	.	-	0	Parent=FBgn0035504.1.mrna1;Target=FBgn0035504.1 1126 1263 +
Chr1	stalkie_big_nohaplotig	CDS	27219019	27219313	.	-	1	Parent=FBgn0035504.1.mrna1;Target=FBgn0035504.1 831 1125 +
Chr1	stalkie_big_nohaplotig	CDS	27219384	27219550	.	-	0	Parent=FBgn0035504.1.mrna1;Target=FBgn0035504.1 664 830 +
Chr1	stalkie_big_nohaplotig	CDS	27219615	27219817	.	-	2	Parent=FBgn0035504.1.mrna1;Target=FBgn0035504.1 461 663 +
Chr1	stalkie_big_nohaplotig	CDS	27219883	27219967	.	-	0	Parent=FBgn0035504.1.mrna1;Target=FBgn0035504.1 376 460 +
Chr1	stalkie_big_nohaplotig	CDS	27222992	27223202	.	-	1	Parent=FBgn0035504.1.mrna1;Target=FBgn0035504.1 165 375 +
Chr1	stalkie_big_nohaplotig	CDS	27223346	27223509	.	-	0	Parent=FBgn0035504.1.mrna1;Target=FBgn0035504.1 1 164 +
Chr1	gffcl	locus	27244626	27245219	.	-	.	ID=RLOC_00006694;geneIDs=Dv_FBgn0206941.3.path1,comp159438_c2_seq1.path2;transcripts=comp159438_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	27244626	27245219	.	-	.	ID=comp159438_c2_seq1.mrna2;geneID=comp159438_c2_seq1.path2;Name=comp159438_c2_seq1;Dir=indeterminatecoverage=13.6;identity=99.2;matches=589;mismatches=5;indels=0;unknowns=0;Target=comp159438_c2_seq1 4355 3762 .;locus=RLOC_00006694
Chr1	stalkie_big_nohaplotig	exon	27244626	27245219	99	-	.	Parent=comp159438_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	27244626	27245189	.	-	0	Parent=comp159438_c2_seq1.mrna2
Chr1	gffcl	locus	27280534	27281236	.	+	.	ID=RLOC_00006695;geneIDs=comp150356_c0_seq1.path2;transcripts=comp150356_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	27280534	27281236	.	+	.	ID=comp150356_c0_seq1.mrna2;geneID=comp150356_c0_seq1.path2;Name=comp150356_c0_seq1;Dir=sensecoverage=96.1;identity=99.5;matches=640;mismatches=2;indels=1;unknowns=0;locus=RLOC_00006695
Chr1	stalkie_big_nohaplotig	exon	27280534	27280614	96	+	.	Parent=comp150356_c0_seq1.mrna2;Target=comp150356_c0_seq1 25 106 +
Chr1	stalkie_big_nohaplotig	exon	27280676	27281236	100	+	.	Parent=comp150356_c0_seq1.mrna2;Target=comp150356_c0_seq1 107 667 +
Chr1	stalkie_big_nohaplotig	CDS	27280536	27280614	.	+	0	Parent=comp150356_c0_seq1.mrna2;Target=comp150356_c0_seq1 27 106 +
Chr1	stalkie_big_nohaplotig	CDS	27280676	27280679	.	+	2	Parent=comp150356_c0_seq1.mrna2;Target=comp150356_c0_seq1 107 110 +
Chr1	gffcl	locus	27284941	28329687	.	-	.	ID=RLOC_00006696;geneIDs=ORF1375.path1,comp161807_c0_seq1.path1;transcripts=comp161807_c0_seq1.mrna1,ORF1375.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27284941	28329687	.	-	.	ID=comp161807_c0_seq1.mrna1;geneID=comp161807_c0_seq1.path1;Name=comp161807_c0_seq1;Dir=sensecoverage=99.3;identity=91.2;matches=1815;mismatches=91;indels=84;unknowns=0;locus=RLOC_00006696
Chr1	stalkie_big_nohaplotig	exon	27284941	27285504	97	-	.	Parent=comp161807_c0_seq1.mrna1;Target=comp161807_c0_seq1 1434 1997 +
Chr1	stalkie_big_nohaplotig	exon	28325761	28326071	86	-	.	Parent=comp161807_c0_seq1.mrna1;Target=comp161807_c0_seq1 1120 1433 +
Chr1	stalkie_big_nohaplotig	exon	28326140	28326175	100	-	.	Parent=comp161807_c0_seq1.mrna1;Target=comp161807_c0_seq1 1064 1099 +
Chr1	stalkie_big_nohaplotig	exon	28326233	28326656	94	-	.	Parent=comp161807_c0_seq1.mrna1;Target=comp161807_c0_seq1 654 1063 +
Chr1	stalkie_big_nohaplotig	exon	28326726	28326802	94	-	.	Parent=comp161807_c0_seq1.mrna1;Target=comp161807_c0_seq1 577 653 +
Chr1	stalkie_big_nohaplotig	exon	28327262	28327376	94	-	.	Parent=comp161807_c0_seq1.mrna1;Target=comp161807_c0_seq1 462 576 +
Chr1	stalkie_big_nohaplotig	exon	28329283	28329687	80	-	.	Parent=comp161807_c0_seq1.mrna1;Target=comp161807_c0_seq1 14 461 +
Chr1	stalkie_big_nohaplotig	CDS	27284942	27285504	.	-	2	Parent=comp161807_c0_seq1.mrna1;Target=comp161807_c0_seq1 1434 1996 +
Chr1	stalkie_big_nohaplotig	CDS	28325761	28325941	.	-	0	Parent=comp161807_c0_seq1.mrna1;Target=comp161807_c0_seq1 1253 1433 +
Chr1	stalkie_big_nohaplotig	mRNA	27284942	27286171	.	-	.	ID=ORF1375.mrna1;geneID=ORF1375.path1;Name=ORF1375;Dir=sensecoverage=100.0;identity=97.4;matches=1093;mismatches=26;indels=3;unknowns=0;locus=RLOC_00006696
Chr1	stalkie_big_nohaplotig	exon	27284942	27285829	98	-	.	Parent=ORF1375.mrna1;Target=ORF1375 235 1122 +
Chr1	stalkie_big_nohaplotig	exon	27285884	27285928	100	-	.	Parent=ORF1375.mrna1;Target=ORF1375 190 234 +
Chr1	stalkie_big_nohaplotig	exon	27285986	27286171	91	-	.	Parent=ORF1375.mrna1;Target=ORF1375 1 189 +
Chr1	stalkie_big_nohaplotig	CDS	27284942	27285829	.	-	0	Parent=ORF1375.mrna1;Target=ORF1375 235 1122 +
Chr1	stalkie_big_nohaplotig	CDS	27285884	27285928	.	-	0	Parent=ORF1375.mrna1;Target=ORF1375 190 234 +
Chr1	stalkie_big_nohaplotig	CDS	27285986	27286171	.	-	0	Parent=ORF1375.mrna1;Target=ORF1375 1 189 +
Chr1	gffcl	locus	27343393	27734871	.	+	.	ID=RLOC_00006698;geneIDs=comp152157_c0_seq1.path1;transcripts=comp152157_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27343393	27734871	.	+	.	ID=comp152157_c0_seq1.mrna1;geneID=comp152157_c0_seq1.path1;Name=comp152157_c0_seq1;Dir=sensecoverage=98.7;identity=99.3;matches=1322;mismatches=6;indels=3;unknowns=0;Target=comp152157_c0_seq1 18 164 +;locus=RLOC_00006698
Chr1	stalkie_big_nohaplotig	exon	27343393	27344087	100	+	.	Parent=comp152157_c0_seq1.mrna1;Target=comp152157_c0_seq1 18 712 +
Chr1	stalkie_big_nohaplotig	exon	27734239	27734871	98	+	.	Parent=comp152157_c0_seq1.mrna1;Target=comp152157_c0_seq1 713 1348 +
Chr1	stalkie_big_nohaplotig	CDS	27343393	27343539	.	+	0	Parent=comp152157_c0_seq1.mrna1
Chr1	gffcl	locus	27371859	27382291	.	+	.	ID=RLOC_00006699;geneIDs=FBgn0013342.1.path2,comp145972_c0_seq1.path1,comp354936_c0_seq1.path1;transcripts=FBgn0013342.1.mrna2,comp145972_c0_seq1.mrna1,comp354936_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27371859	27382291	.	+	.	ID=FBgn0013342.1.mrna2;geneID=FBgn0013342.1.path2;Name=FBgn0013342.1;Dir=sensecoverage=63.8;identity=99.5;matches=373;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006699
Chr1	stalkie_big_nohaplotig	exon	27371859	27372017	99	+	.	Parent=FBgn0013342.1.mrna2;Target=FBgn0013342.1 214 372 +
Chr1	stalkie_big_nohaplotig	exon	27372098	27372149	100	+	.	Parent=FBgn0013342.1.mrna2;Target=FBgn0013342.1 373 424 +
Chr1	stalkie_big_nohaplotig	exon	27382128	27382291	99	+	.	Parent=FBgn0013342.1.mrna2;Target=FBgn0013342.1 425 588 +
Chr1	stalkie_big_nohaplotig	CDS	27371859	27372017	.	+	0	Parent=FBgn0013342.1.mrna2;Target=FBgn0013342.1 214 372 +
Chr1	stalkie_big_nohaplotig	CDS	27372098	27372149	.	+	0	Parent=FBgn0013342.1.mrna2;Target=FBgn0013342.1 373 424 +
Chr1	stalkie_big_nohaplotig	CDS	27382128	27382291	.	+	2	Parent=FBgn0013342.1.mrna2;Target=FBgn0013342.1 425 588 +
Chr1	stalkie_big_nohaplotig	mRNA	27372127	27372777	.	+	.	ID=comp145972_c0_seq1.mrna1;geneID=comp145972_c0_seq1.path1;Name=comp145972_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=273;mismatches=0;indels=1;unknowns=0;Target=comp145972_c0_seq1 158 217 +;locus=RLOC_00006699
Chr1	stalkie_big_nohaplotig	exon	27372127	27372149	100	+	.	Parent=comp145972_c0_seq1.mrna1;Target=comp145972_c0_seq1 1 23 +
Chr1	stalkie_big_nohaplotig	exon	27372528	27372777	99	+	.	Parent=comp145972_c0_seq1.mrna1;Target=comp145972_c0_seq1 24 274 +
Chr1	stalkie_big_nohaplotig	CDS	27372662	27372720	.	+	0	Parent=comp145972_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27381928	27382149	.	+	.	ID=comp354936_c0_seq1.mrna1;geneID=comp354936_c0_seq1.path1;Name=comp354936_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=222;mismatches=0;indels=0;unknowns=0;Target=comp354936_c0_seq1 222 1 .;CDS_Target=comp354936_c0_seq1 135 79 .;locus=RLOC_00006699
Chr1	stalkie_big_nohaplotig	exon	27381928	27382149	100	+	.	Parent=comp354936_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27382006	27382062	.	+	0	Parent=comp354936_c0_seq1.mrna1
Chr1	gffcl	locus	27375874	27376415	.	+	.	ID=RLOC_00006700;geneIDs=comp143702_c0_seq1.path1;transcripts=comp143702_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27375874	27376415	.	+	.	ID=comp143702_c0_seq1.mrna1;geneID=comp143702_c0_seq1.path1;Name=comp143702_c0_seq1;Dir=indeterminatecoverage=97.6;identity=98.3;matches=534;mismatches=4;indels=5;unknowns=0;Target=comp143702_c0_seq1 552 14 .;CDS_Target=comp143702_c0_seq1 306 250 .;locus=RLOC_00006700
Chr1	stalkie_big_nohaplotig	exon	27375874	27376415	98	+	.	Parent=comp143702_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27376110	27376166	.	+	0	Parent=comp143702_c0_seq1.mrna1
Chr1	gffcl	locus	27379215	27380401	.	-	.	ID=RLOC_00006701;geneIDs=comp145418_c0_seq1.path1,comp158110_c0_seq1.path1;transcripts=comp158110_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27379441	27380401	.	-	.	ID=comp158110_c0_seq1.mrna1;geneID=comp158110_c0_seq1.path1;Name=comp158110_c0_seq1;Dir=indeterminatecoverage=59.8;identity=94.5;matches=909;mismatches=52;indels=1;unknowns=0;Target=comp158110_c0_seq1 1608 647 .;CDS_Target=comp158110_c0_seq1 850 809 .;locus=RLOC_00006701
Chr1	stalkie_big_nohaplotig	exon	27379441	27380401	94	-	.	Parent=comp158110_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27380198	27380239	.	-	0	Parent=comp158110_c0_seq1.mrna1
Chr1	gffcl	locus	27380446	27380663	.	+	.	ID=RLOC_00006702;geneIDs=comp144458_c0_seq1.path1;transcripts=comp144458_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27380446	27380663	.	+	.	ID=comp144458_c0_seq1.mrna1;geneID=comp144458_c0_seq1.path1;Name=comp144458_c0_seq1;Dir=indeterminatecoverage=72.4;identity=95.9;matches=209;mismatches=9;indels=0;unknowns=0;Target=comp144458_c0_seq1 218 1 .;CDS_Target=comp144458_c0_seq1 145 2 .;locus=RLOC_00006702
Chr1	stalkie_big_nohaplotig	exon	27380446	27380663	95	+	.	Parent=comp144458_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27380447	27380590	.	+	0	Parent=comp144458_c0_seq1.mrna1
Chr1	gffcl	locus	27383700	27384668	.	-	.	ID=RLOC_00006703;geneIDs=comp142888_c0_seq1.path1;transcripts=comp142888_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27383700	27384668	.	-	.	ID=comp142888_c0_seq1.mrna1;geneID=comp142888_c0_seq1.path1;Name=comp142888_c0_seq1;Dir=indeterminatecoverage=95.8;identity=99.8;matches=968;mismatches=1;indels=1;unknowns=0;Target=comp142888_c0_seq1 970 1 .;CDS_Target=comp142888_c0_seq1 768 694 .;locus=RLOC_00006703
Chr1	stalkie_big_nohaplotig	exon	27383700	27384668	99	-	.	Parent=comp142888_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27383902	27383975	.	-	0	Parent=comp142888_c0_seq1.mrna1
Chr1	gffcl	locus	27397983	27398842	.	+	.	ID=RLOC_00006704;geneIDs=FBgn0035246.1.path1;transcripts=FBgn0035246.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27397983	27398842	.	+	.	ID=FBgn0035246.1.mrna1;geneID=FBgn0035246.1.path1;Name=FBgn0035246.1;Dir=sensecoverage=100.0;identity=99.7;matches=784;mismatches=1;indels=1;unknowns=0;Target=FBgn0035246.1 3 128 +;locus=RLOC_00006704
Chr1	stalkie_big_nohaplotig	exon	27397983	27398712	99	+	.	Parent=FBgn0035246.1.mrna1;Target=FBgn0035246.1 1 731 +
Chr1	stalkie_big_nohaplotig	exon	27398788	27398842	100	+	.	Parent=FBgn0035246.1.mrna1;Target=FBgn0035246.1 732 786 +
Chr1	stalkie_big_nohaplotig	CDS	27397985	27398109	.	+	0	Parent=FBgn0035246.1.mrna1
Chr1	gffcl	locus	27411560	27411881	.	+	.	ID=RLOC_00006705;geneIDs=comp135255_c0_seq1.path1;transcripts=comp135255_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27411560	27411881	.	+	.	ID=comp135255_c0_seq1.mrna1;geneID=comp135255_c0_seq1.path1;Name=comp135255_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=319;mismatches=3;indels=0;unknowns=0;Target=comp135255_c0_seq1 322 1 .;CDS_Target=comp135255_c0_seq1 267 163 .;locus=RLOC_00006705
Chr1	stalkie_big_nohaplotig	exon	27411560	27411881	99	+	.	Parent=comp135255_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27411722	27411826	.	+	0	Parent=comp135255_c0_seq1.mrna1
Chr1	gffcl	locus	27412550	27413347	.	-	.	ID=RLOC_00006706;geneIDs=comp136501_c0_seq1.path1;transcripts=comp136501_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27412550	27413347	.	-	.	ID=comp136501_c0_seq1.mrna1;geneID=comp136501_c0_seq1.path1;Name=comp136501_c0_seq1;Dir=indeterminatecoverage=99.7;identity=96.0;matches=766;mismatches=30;indels=2;unknowns=0;Target=comp136501_c0_seq1 796 1 .;CDS_Target=comp136501_c0_seq1 90 1 .;locus=RLOC_00006706
Chr1	stalkie_big_nohaplotig	exon	27412550	27413347	95	-	.	Parent=comp136501_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27413258	27413347	.	-	0	Parent=comp136501_c0_seq1.mrna1
Chr1	gffcl	locus	27414744	27415566	.	+	.	ID=RLOC_00006707;geneIDs=FBgn0035243.1.path1;transcripts=FBgn0035243.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27414744	27415566	.	+	.	ID=FBgn0035243.1.mrna1;geneID=FBgn0035243.1.path1;Name=FBgn0035243.1;Dir=sensecoverage=100.0;identity=99.9;matches=695;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006707
Chr1	stalkie_big_nohaplotig	exon	27414744	27414887	100	+	.	Parent=FBgn0035243.1.mrna1;Target=FBgn0035243.1 1 144 +
Chr1	stalkie_big_nohaplotig	exon	27414954	27415313	99	+	.	Parent=FBgn0035243.1.mrna1;Target=FBgn0035243.1 145 504 +
Chr1	stalkie_big_nohaplotig	exon	27415375	27415566	100	+	.	Parent=FBgn0035243.1.mrna1;Target=FBgn0035243.1 505 696 +
Chr1	stalkie_big_nohaplotig	CDS	27414744	27414887	.	+	0	Parent=FBgn0035243.1.mrna1;Target=FBgn0035243.1 1 144 +
Chr1	stalkie_big_nohaplotig	CDS	27414954	27415313	.	+	0	Parent=FBgn0035243.1.mrna1;Target=FBgn0035243.1 145 504 +
Chr1	stalkie_big_nohaplotig	CDS	27415375	27415566	.	+	0	Parent=FBgn0035243.1.mrna1;Target=FBgn0035243.1 505 696 +
Chr1	gffcl	locus	27416124	27416331	.	+	.	ID=RLOC_00006708;geneIDs=comp95164_c0_seq1.path1;transcripts=comp95164_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27416124	27416331	.	+	.	ID=comp95164_c0_seq1.mrna1;geneID=comp95164_c0_seq1.path1;Name=comp95164_c0_seq1;Dir=indeterminatecoverage=95.9;identity=100.0;matches=208;mismatches=0;indels=0;unknowns=0;Target=comp95164_c0_seq1 214 7 .;CDS_Target=comp95164_c0_seq1 116 81 .;locus=RLOC_00006708
Chr1	stalkie_big_nohaplotig	exon	27416124	27416331	100	+	.	Parent=comp95164_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27416198	27416233	.	+	0	Parent=comp95164_c0_seq1.mrna1
Chr1	gffcl	locus	27419284	27420648	.	+	.	ID=RLOC_00006710;geneIDs=FBgn0053230.1.path1;transcripts=FBgn0053230.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27419284	27420648	.	+	.	ID=FBgn0053230.1.mrna1;geneID=FBgn0053230.1.path1;Name=FBgn0053230.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1354;mismatches=11;indels=0;unknowns=0;Target=FBgn0053230.1 1365 1 .;locus=RLOC_00006710
Chr1	stalkie_big_nohaplotig	exon	27419284	27420648	99	+	.	Parent=FBgn0053230.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27419284	27420648	.	+	0	Parent=FBgn0053230.1.mrna1
Chr1	gffcl	locus	27424633	27424976	.	+	.	ID=RLOC_00006711;geneIDs=comp137269_c0_seq1.path1;transcripts=comp137269_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27424633	27424976	.	+	.	ID=comp137269_c0_seq1.mrna1;geneID=comp137269_c0_seq1.path1;Name=comp137269_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.4;matches=342;mismatches=2;indels=0;unknowns=0;Target=comp137269_c0_seq1 344 1 .;CDS_Target=comp137269_c0_seq1 76 2 .;locus=RLOC_00006711
Chr1	stalkie_big_nohaplotig	exon	27424633	27424976	99	+	.	Parent=comp137269_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27424634	27424708	.	+	0	Parent=comp137269_c0_seq1.mrna1
Chr1	gffcl	locus	27431034	27433397	.	-	.	ID=RLOC_00006712;geneIDs=FBgn0035245.1.path1;transcripts=FBgn0035245.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27431034	27433397	.	-	.	ID=FBgn0035245.1.mrna1;geneID=FBgn0035245.1.path1;Name=FBgn0035245.1;Dir=sensecoverage=98.2;identity=99.5;matches=2099;mismatches=8;indels=3;unknowns=0;locus=RLOC_00006712
Chr1	stalkie_big_nohaplotig	exon	27431034	27432247	99	-	.	Parent=FBgn0035245.1.mrna1;Target=FBgn0035245.1 932 2145 +
Chr1	stalkie_big_nohaplotig	exon	27432303	27432649	100	-	.	Parent=FBgn0035245.1.mrna1;Target=FBgn0035245.1 585 931 +
Chr1	stalkie_big_nohaplotig	exon	27432707	27433028	100	-	.	Parent=FBgn0035245.1.mrna1;Target=FBgn0035245.1 263 584 +
Chr1	stalkie_big_nohaplotig	exon	27433171	27433397	98	-	.	Parent=FBgn0035245.1.mrna1;Target=FBgn0035245.1 39 262 +
Chr1	stalkie_big_nohaplotig	CDS	27431034	27432247	.	-	2	Parent=FBgn0035245.1.mrna1;Target=FBgn0035245.1 932 2145 +
Chr1	stalkie_big_nohaplotig	CDS	27432303	27432649	.	-	1	Parent=FBgn0035245.1.mrna1;Target=FBgn0035245.1 585 931 +
Chr1	stalkie_big_nohaplotig	CDS	27432707	27433028	.	-	2	Parent=FBgn0035245.1.mrna1;Target=FBgn0035245.1 263 584 +
Chr1	stalkie_big_nohaplotig	CDS	27433171	27433396	.	-	0	Parent=FBgn0035245.1.mrna1;Target=FBgn0035245.1 40 262 +
Chr1	gffcl	locus	27452631	27460888	.	+	.	ID=RLOC_00006713;geneIDs=comp159376_c2_seq1.path1;transcripts=comp159376_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27452631	27460888	.	+	.	ID=comp159376_c2_seq1.mrna1;geneID=comp159376_c2_seq1.path1;Name=comp159376_c2_seq1;Dir=indeterminatecoverage=88.0;identity=95.7;matches=1372;mismatches=42;indels=19;unknowns=0;Target=comp159376_c2_seq1 480 349 .;locus=RLOC_00006713
Chr1	stalkie_big_nohaplotig	exon	27452631	27453198	90	+	.	Parent=comp159376_c2_seq1.mrna1;Target=comp159376_c2_seq1 782 196 .
Chr1	stalkie_big_nohaplotig	exon	27460043	27460888	99	+	.	Parent=comp159376_c2_seq1.mrna1;Target=comp159376_c2_seq1 1628 783 .
Chr1	stalkie_big_nohaplotig	CDS	27452784	27452915	.	+	0	Parent=comp159376_c2_seq1.mrna1
Chr1	gffcl	locus	27458566	27472484	.	.	.	ID=RLOC_00006714;geneIDs=FBgn0036044.1.path1,comp73224_c0_seq1.path1;transcripts=FBgn0036044.1.mrna1,comp73224_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27458566	27472484	.	-	.	ID=FBgn0036044.1.mrna1;geneID=FBgn0036044.1.path1;Name=FBgn0036044.1;Dir=sensecoverage=100.0;identity=99.7;matches=2093;mismatches=7;indels=0;unknowns=0;locus=RLOC_00006714
Chr1	stalkie_big_nohaplotig	exon	27458566	27458725	100	-	.	Parent=FBgn0036044.1.mrna1;Target=FBgn0036044.1 1941 2100 +
Chr1	stalkie_big_nohaplotig	exon	27461721	27461938	100	-	.	Parent=FBgn0036044.1.mrna1;Target=FBgn0036044.1 1723 1940 +
Chr1	stalkie_big_nohaplotig	exon	27465128	27465351	99	-	.	Parent=FBgn0036044.1.mrna1;Target=FBgn0036044.1 1499 1722 +
Chr1	stalkie_big_nohaplotig	exon	27465499	27466195	99	-	.	Parent=FBgn0036044.1.mrna1;Target=FBgn0036044.1 802 1498 +
Chr1	stalkie_big_nohaplotig	exon	27466265	27466514	99	-	.	Parent=FBgn0036044.1.mrna1;Target=FBgn0036044.1 552 801 +
Chr1	stalkie_big_nohaplotig	exon	27466596	27466868	99	-	.	Parent=FBgn0036044.1.mrna1;Target=FBgn0036044.1 279 551 +
Chr1	stalkie_big_nohaplotig	exon	27466933	27467084	100	-	.	Parent=FBgn0036044.1.mrna1;Target=FBgn0036044.1 127 278 +
Chr1	stalkie_big_nohaplotig	exon	27472359	27472484	100	-	.	Parent=FBgn0036044.1.mrna1;Target=FBgn0036044.1 1 126 +
Chr1	stalkie_big_nohaplotig	CDS	27458566	27458725	.	-	1	Parent=FBgn0036044.1.mrna1;Target=FBgn0036044.1 1941 2100 +
Chr1	stalkie_big_nohaplotig	CDS	27461721	27461938	.	-	0	Parent=FBgn0036044.1.mrna1;Target=FBgn0036044.1 1723 1940 +
Chr1	stalkie_big_nohaplotig	CDS	27465128	27465351	.	-	2	Parent=FBgn0036044.1.mrna1;Target=FBgn0036044.1 1499 1722 +
Chr1	stalkie_big_nohaplotig	CDS	27465499	27466195	.	-	0	Parent=FBgn0036044.1.mrna1;Target=FBgn0036044.1 802 1498 +
Chr1	stalkie_big_nohaplotig	CDS	27466265	27466514	.	-	1	Parent=FBgn0036044.1.mrna1;Target=FBgn0036044.1 552 801 +
Chr1	stalkie_big_nohaplotig	CDS	27466596	27466868	.	-	1	Parent=FBgn0036044.1.mrna1;Target=FBgn0036044.1 279 551 +
Chr1	stalkie_big_nohaplotig	CDS	27466933	27467084	.	-	0	Parent=FBgn0036044.1.mrna1;Target=FBgn0036044.1 127 278 +
Chr1	stalkie_big_nohaplotig	CDS	27472359	27472484	.	-	0	Parent=FBgn0036044.1.mrna1;Target=FBgn0036044.1 1 126 +
Chr1	stalkie_big_nohaplotig	mRNA	27461917	27462186	.	+	.	ID=comp73224_c0_seq1.mrna1;geneID=comp73224_c0_seq1.path1;Name=comp73224_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=269;mismatches=0;indels=1;unknowns=0;Target=comp73224_c0_seq1 269 1 .;CDS_Target=comp73224_c0_seq1 161 3 .;locus=RLOC_00006714
Chr1	stalkie_big_nohaplotig	exon	27461917	27462186	99	+	.	Parent=comp73224_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27461919	27462078	.	+	0	Parent=comp73224_c0_seq1.mrna1
Chr1	gffcl	locus	27460930	27461540	.	-	.	ID=RLOC_00006715;geneIDs=comp68958_c0_seq1.path1;transcripts=comp68958_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27460930	27461540	.	-	.	ID=comp68958_c0_seq1.mrna1;geneID=comp68958_c0_seq1.path1;Name=comp68958_c0_seq1;Dir=indeterminatecoverage=92.2;identity=99.5;matches=608;mismatches=3;indels=0;unknowns=0;Target=comp68958_c0_seq1 611 1 .;CDS_Target=comp68958_c0_seq1 337 224 .;locus=RLOC_00006715
Chr1	stalkie_big_nohaplotig	exon	27460930	27461540	99	-	.	Parent=comp68958_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27461204	27461317	.	-	0	Parent=comp68958_c0_seq1.mrna1
Chr1	gffcl	locus	27462830	27463975	.	-	.	ID=RLOC_00006716;geneIDs=comp152448_c0_seq1.path1;transcripts=comp152448_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27462830	27463975	.	-	.	ID=comp152448_c0_seq1.mrna1;geneID=comp152448_c0_seq1.path1;Name=comp152448_c0_seq1;Dir=indeterminatecoverage=99.0;identity=95.0;matches=1105;mismatches=39;indels=19;unknowns=0;Target=comp152448_c0_seq1 1173 13 .;CDS_Target=comp152448_c0_seq1 565 395 .;locus=RLOC_00006716
Chr1	stalkie_big_nohaplotig	exon	27462830	27463975	95	-	.	Parent=comp152448_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27463440	27463610	.	-	0	Parent=comp152448_c0_seq1.mrna1
Chr1	gffcl	locus	27502040	27502504	.	+	.	ID=RLOC_00006717;geneIDs=comp138658_c0_seq1.path1;transcripts=comp138658_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27502040	27502504	.	+	.	ID=comp138658_c0_seq1.mrna1;geneID=comp138658_c0_seq1.path1;Name=comp138658_c0_seq1;Dir=indeterminatecoverage=98.9;identity=98.3;matches=457;mismatches=8;indels=0;unknowns=0;Target=comp138658_c0_seq1 466 2 .;CDS_Target=comp138658_c0_seq1 415 209 .;locus=RLOC_00006717
Chr1	stalkie_big_nohaplotig	exon	27502040	27502504	98	+	.	Parent=comp138658_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27502247	27502453	.	+	0	Parent=comp138658_c0_seq1.mrna1
Chr1	gffcl	locus	27504600	27506094	.	+	.	ID=RLOC_00006718;geneIDs=comp145501_c0_seq1.path1;transcripts=comp145501_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27504600	27506094	.	+	.	ID=comp145501_c0_seq1.mrna1;geneID=comp145501_c0_seq1.path1;Name=comp145501_c0_seq1;Dir=sensecoverage=100.0;identity=98.5;matches=642;mismatches=10;indels=0;unknowns=0;locus=RLOC_00006718
Chr1	stalkie_big_nohaplotig	exon	27504600	27504865	99	+	.	Parent=comp145501_c0_seq1.mrna1;Target=comp145501_c0_seq1 1 266 +
Chr1	stalkie_big_nohaplotig	exon	27504938	27504985	97	+	.	Parent=comp145501_c0_seq1.mrna1;Target=comp145501_c0_seq1 267 314 +
Chr1	stalkie_big_nohaplotig	exon	27505757	27506094	97	+	.	Parent=comp145501_c0_seq1.mrna1;Target=comp145501_c0_seq1 315 652 +
Chr1	stalkie_big_nohaplotig	CDS	27504695	27504865	.	+	0	Parent=comp145501_c0_seq1.mrna1;Target=comp145501_c0_seq1 96 266 +
Chr1	stalkie_big_nohaplotig	CDS	27504938	27504985	.	+	0	Parent=comp145501_c0_seq1.mrna1;Target=comp145501_c0_seq1 267 314 +
Chr1	stalkie_big_nohaplotig	CDS	27505757	27505846	.	+	0	Parent=comp145501_c0_seq1.mrna1;Target=comp145501_c0_seq1 315 404 +
Chr1	gffcl	locus	27514939	27515951	.	-	.	ID=RLOC_00006719;geneIDs=comp151765_c0_seq1.path1;transcripts=comp151765_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27514939	27515951	.	-	.	ID=comp151765_c0_seq1.mrna1;geneID=comp151765_c0_seq1.path1;Name=comp151765_c0_seq1;Dir=antisensecoverage=99.2;identity=98.1;matches=612;mismatches=7;indels=5;unknowns=0;Target=comp151765_c0_seq1 122 217 .;locus=RLOC_00006719
Chr1	stalkie_big_nohaplotig	exon	27514939	27515495	97	-	.	Parent=comp151765_c0_seq1.mrna1;Target=comp151765_c0_seq1 6 567 -
Chr1	stalkie_big_nohaplotig	exon	27515890	27515951	100	-	.	Parent=comp151765_c0_seq1.mrna1;Target=comp151765_c0_seq1 568 629 -
Chr1	stalkie_big_nohaplotig	CDS	27515055	27515148	.	-	0	Parent=comp151765_c0_seq1.mrna1
Chr1	gffcl	locus	27517269	27522394	.	+	.	ID=RLOC_00006720;geneIDs=comp147101_c1_seq1.path1;transcripts=comp147101_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27517269	27522394	.	+	.	ID=comp147101_c1_seq1.mrna1;geneID=comp147101_c1_seq1.path1;Name=comp147101_c1_seq1;Dir=sensecoverage=96.3;identity=97.2;matches=1861;mismatches=31;indels=22;unknowns=0;Target=comp147101_c1_seq1 484 597 +;locus=RLOC_00006720
Chr1	stalkie_big_nohaplotig	exon	27517269	27518075	95	+	.	Parent=comp147101_c1_seq1.mrna1;Target=comp147101_c1_seq1 69 871 +
Chr1	stalkie_big_nohaplotig	exon	27518797	27518912	100	+	.	Parent=comp147101_c1_seq1.mrna1;Target=comp147101_c1_seq1 872 987 +
Chr1	stalkie_big_nohaplotig	exon	27521409	27522394	98	+	.	Parent=comp147101_c1_seq1.mrna1;Target=comp147101_c1_seq1 988 1965 +
Chr1	stalkie_big_nohaplotig	CDS	27517693	27517806	.	+	0	Parent=comp147101_c1_seq1.mrna1
Chr1	gffcl	locus	27596042	27723375	.	+	.	ID=RLOC_00006721;geneIDs=comp159465_c2_seq1.path1;transcripts=comp159465_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27596042	27723375	.	+	.	ID=comp159465_c2_seq1.mrna1;geneID=comp159465_c2_seq1.path1;Name=comp159465_c2_seq1;Dir=sensecoverage=97.8;identity=93.9;matches=2075;mismatches=87;indels=48;unknowns=0;locus=RLOC_00006721
Chr1	stalkie_big_nohaplotig	exon	27596042	27596109	92	+	.	Parent=comp159465_c2_seq1.mrna1;Target=comp159465_c2_seq1 49 116 +
Chr1	stalkie_big_nohaplotig	exon	27596167	27596566	92	+	.	Parent=comp159465_c2_seq1.mrna1;Target=comp159465_c2_seq1 117 496 +
Chr1	stalkie_big_nohaplotig	exon	27596629	27596798	93	+	.	Parent=comp159465_c2_seq1.mrna1;Target=comp159465_c2_seq1 497 666 +
Chr1	stalkie_big_nohaplotig	exon	27655358	27655674	99	+	.	Parent=comp159465_c2_seq1.mrna1;Target=comp159465_c2_seq1 667 983 +
Chr1	stalkie_big_nohaplotig	exon	27655801	27656599	89	+	.	Parent=comp159465_c2_seq1.mrna1;Target=comp159465_c2_seq1 984 1782 +
Chr1	stalkie_big_nohaplotig	exon	27662882	27662890	100	+	.	Parent=comp159465_c2_seq1.mrna1;Target=comp159465_c2_seq1 1783 1791 +
Chr1	stalkie_big_nohaplotig	exon	27678876	27678879	100	+	.	Parent=comp159465_c2_seq1.mrna1;Target=comp159465_c2_seq1 1799 1802 +
Chr1	stalkie_big_nohaplotig	exon	27694317	27694324	100	+	.	Parent=comp159465_c2_seq1.mrna1;Target=comp159465_c2_seq1 1803 1810 +
Chr1	stalkie_big_nohaplotig	exon	27718658	27718662	100	+	.	Parent=comp159465_c2_seq1.mrna1;Target=comp159465_c2_seq1 1811 1815 +
Chr1	stalkie_big_nohaplotig	exon	27720805	27720806	100	+	.	Parent=comp159465_c2_seq1.mrna1;Target=comp159465_c2_seq1 1816 1817 +
Chr1	stalkie_big_nohaplotig	exon	27722961	27723375	99	+	.	Parent=comp159465_c2_seq1.mrna1;Target=comp159465_c2_seq1 1818 2230 +
Chr1	stalkie_big_nohaplotig	CDS	27655505	27655674	.	+	0	Parent=comp159465_c2_seq1.mrna1;Target=comp159465_c2_seq1 814 983 +
Chr1	stalkie_big_nohaplotig	CDS	27655801	27655825	.	+	1	Parent=comp159465_c2_seq1.mrna1;Target=comp159465_c2_seq1 984 1008 +
Chr1	gffcl	locus	27602615	27603646	.	.	.	ID=RLOC_00006722;geneIDs=comp83963_c0_seq1.path1,comp146151_c0_seq1.path1,comp147300_c0_seq1.path2;transcripts=comp147300_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	27603118	27603646	.	+	.	ID=comp147300_c0_seq1.mrna2;geneID=comp147300_c0_seq1.path2;Name=comp147300_c0_seq1;Dir=indeterminatecoverage=68.9;identity=87.5;matches=496;mismatches=13;indels=58;unknowns=0;Target=comp147300_c0_seq1 794 248 .;locus=RLOC_00006722
Chr1	stalkie_big_nohaplotig	exon	27603118	27603646	87	+	.	Parent=comp147300_c0_seq1.mrna2
Chr1	gffcl	locus	27604585	27605058	.	-	.	ID=RLOC_00006723;geneIDs=comp134881_c0_seq1.path1;transcripts=comp134881_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27604585	27605058	.	-	.	ID=comp134881_c0_seq1.mrna1;geneID=comp134881_c0_seq1.path1;Name=comp134881_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=472;mismatches=2;indels=0;unknowns=0;Target=comp134881_c0_seq1 474 1 .;CDS_Target=comp134881_c0_seq1 99 1 .;locus=RLOC_00006723
Chr1	stalkie_big_nohaplotig	exon	27604585	27605058	99	-	.	Parent=comp134881_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27604960	27605058	.	-	0	Parent=comp134881_c0_seq1.mrna1
Chr1	gffcl	locus	27605701	27607024	.	-	.	ID=RLOC_00006724;geneIDs=comp155396_c0_seq1.path1;transcripts=comp155396_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27605701	27607024	.	-	.	ID=comp155396_c0_seq1.mrna1;geneID=comp155396_c0_seq1.path1;Name=comp155396_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.8;matches=1285;mismatches=28;indels=15;unknowns=0;Target=comp155396_c0_seq1 1317 1 .;CDS_Target=comp155396_c0_seq1 925 776 .;locus=RLOC_00006724
Chr1	stalkie_big_nohaplotig	exon	27605701	27607024	96	-	.	Parent=comp155396_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27606097	27606246	.	-	0	Parent=comp155396_c0_seq1.mrna1
Chr1	gffcl	locus	27607045	27607312	.	+	.	ID=RLOC_00006725;geneIDs=comp1299626_c0_seq1.path1;transcripts=comp1299626_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27607045	27607312	.	+	.	ID=comp1299626_c0_seq1.mrna1;geneID=comp1299626_c0_seq1.path1;Name=comp1299626_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=268;mismatches=0;indels=0;unknowns=0;Target=comp1299626_c0_seq1 268 1 .;CDS_Target=comp1299626_c0_seq1 70 2 .;locus=RLOC_00006725
Chr1	stalkie_big_nohaplotig	exon	27607045	27607312	100	+	.	Parent=comp1299626_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27607046	27607114	.	+	0	Parent=comp1299626_c0_seq1.mrna1
Chr1	gffcl	locus	27608330	27608953	.	+	.	ID=RLOC_00006726;geneIDs=comp149379_c0_seq1.path1;transcripts=comp149379_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27608330	27608953	.	+	.	ID=comp149379_c0_seq1.mrna1;geneID=comp149379_c0_seq1.path1;Name=comp149379_c0_seq1;Dir=indeterminatecoverage=99.8;identity=96.6;matches=605;mismatches=10;indels=11;unknowns=0;Target=comp149379_c0_seq1 617 1 .;CDS_Target=comp149379_c0_seq1 450 277 .;locus=RLOC_00006726
Chr1	stalkie_big_nohaplotig	exon	27608330	27608953	96	+	.	Parent=comp149379_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27608613	27608786	.	+	0	Parent=comp149379_c0_seq1.mrna1
Chr1	gffcl	locus	27612570	27613668	.	+	.	ID=RLOC_00006727;geneIDs=comp158334_c1_seq1.path1;transcripts=comp158334_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27612570	27613668	.	+	.	ID=comp158334_c1_seq1.mrna1;geneID=comp158334_c1_seq1.path1;Name=comp158334_c1_seq1;Dir=indeterminatecoverage=88.9;identity=99.4;matches=1092;mismatches=2;indels=5;unknowns=0;Target=comp158334_c1_seq1 1095 2 .;CDS_Target=comp158334_c1_seq1 712 575 .;locus=RLOC_00006727
Chr1	stalkie_big_nohaplotig	exon	27612570	27613668	99	+	.	Parent=comp158334_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27613148	27613285	.	+	0	Parent=comp158334_c1_seq1.mrna1
Chr1	gffcl	locus	27613691	27722410	.	-	.	ID=RLOC_00006728;geneIDs=comp154655_c0_seq1.path1;transcripts=comp154655_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27613691	27722410	.	-	.	ID=comp154655_c0_seq1.mrna1;geneID=comp154655_c0_seq1.path1;Name=comp154655_c0_seq1;Dir=antisensecoverage=88.6;identity=94.6;matches=512;mismatches=15;indels=14;unknowns=0;Target=comp154655_c0_seq1 81 170 .;locus=RLOC_00006728
Chr1	stalkie_big_nohaplotig	exon	27613691	27614123	97	-	.	Parent=comp154655_c0_seq1.mrna1;Target=comp154655_c0_seq1 6 437 -
Chr1	stalkie_big_nohaplotig	exon	27624931	27624935	100	-	.	Parent=comp154655_c0_seq1.mrna1;Target=comp154655_c0_seq1 438 442 -
Chr1	stalkie_big_nohaplotig	exon	27631444	27631445	100	-	.	Parent=comp154655_c0_seq1.mrna1;Target=comp154655_c0_seq1 443 444 -
Chr1	stalkie_big_nohaplotig	exon	27637555	27637563	100	-	.	Parent=comp154655_c0_seq1.mrna1;Target=comp154655_c0_seq1 445 453 -
Chr1	stalkie_big_nohaplotig	exon	27642557	27642558	100	-	.	Parent=comp154655_c0_seq1.mrna1;Target=comp154655_c0_seq1 454 455 -
Chr1	stalkie_big_nohaplotig	exon	27646011	27646015	100	-	.	Parent=comp154655_c0_seq1.mrna1;Target=comp154655_c0_seq1 456 460 -
Chr1	stalkie_big_nohaplotig	exon	27651987	27651988	100	-	.	Parent=comp154655_c0_seq1.mrna1;Target=comp154655_c0_seq1 461 462 -
Chr1	stalkie_big_nohaplotig	exon	27665141	27665145	100	-	.	Parent=comp154655_c0_seq1.mrna1;Target=comp154655_c0_seq1 463 467 -
Chr1	stalkie_big_nohaplotig	exon	27681006	27681007	100	-	.	Parent=comp154655_c0_seq1.mrna1;Target=comp154655_c0_seq1 468 469 -
Chr1	stalkie_big_nohaplotig	exon	27685751	27685755	100	-	.	Parent=comp154655_c0_seq1.mrna1;Target=comp154655_c0_seq1 470 474 -
Chr1	stalkie_big_nohaplotig	exon	27687729	27687735	100	-	.	Parent=comp154655_c0_seq1.mrna1;Target=comp154655_c0_seq1 475 481 -
Chr1	stalkie_big_nohaplotig	exon	27691732	27691744	76	-	.	Parent=comp154655_c0_seq1.mrna1;Target=comp154655_c0_seq1 482 494 -
Chr1	stalkie_big_nohaplotig	exon	27691960	27691993	52	-	.	Parent=comp154655_c0_seq1.mrna1;Target=comp154655_c0_seq1 495 515 -
Chr1	stalkie_big_nohaplotig	exon	27699169	27699170	50	-	.	Parent=comp154655_c0_seq1.mrna1;Target=comp154655_c0_seq1 516 517 -
Chr1	stalkie_big_nohaplotig	exon	27705340	27705347	100	-	.	Parent=comp154655_c0_seq1.mrna1;Target=comp154655_c0_seq1 518 525 -
Chr1	stalkie_big_nohaplotig	exon	27720397	27720400	100	-	.	Parent=comp154655_c0_seq1.mrna1;Target=comp154655_c0_seq1 526 529 -
Chr1	stalkie_big_nohaplotig	exon	27722408	27722410	100	-	.	Parent=comp154655_c0_seq1.mrna1;Target=comp154655_c0_seq1 530 532 -
Chr1	stalkie_big_nohaplotig	CDS	27613767	27613856	.	-	0	Parent=comp154655_c0_seq1.mrna1
Chr1	gffcl	locus	27615638	27616202	.	+	.	ID=RLOC_00006729;geneIDs=comp136556_c0_seq1.path1;transcripts=comp136556_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27615638	27616202	.	+	.	ID=comp136556_c0_seq1.mrna1;geneID=comp136556_c0_seq1.path1;Name=comp136556_c0_seq1;Dir=indeterminatecoverage=94.2;identity=98.4;matches=556;mismatches=9;indels=0;unknowns=0;Target=comp136556_c0_seq1 567 3 .;CDS_Target=comp136556_c0_seq1 270 160 .;locus=RLOC_00006729
Chr1	stalkie_big_nohaplotig	exon	27615638	27616202	98	+	.	Parent=comp136556_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27615795	27615905	.	+	0	Parent=comp136556_c0_seq1.mrna1
Chr1	gffcl	locus	27617173	27618559	.	+	.	ID=RLOC_00006730;geneIDs=comp143233_c0_seq1.path1;transcripts=comp143233_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27617173	27618559	.	+	.	ID=comp143233_c0_seq1.mrna1;geneID=comp143233_c0_seq1.path1;Name=comp143233_c0_seq1;Dir=sensecoverage=100.0;identity=95.5;matches=1221;mismatches=47;indels=11;unknowns=0;Target=comp143233_c0_seq1 558 695 +;locus=RLOC_00006730
Chr1	stalkie_big_nohaplotig	exon	27617173	27618362	95	+	.	Parent=comp143233_c0_seq1.mrna1;Target=comp143233_c0_seq1 1 1197 +
Chr1	stalkie_big_nohaplotig	exon	27618480	27618559	100	+	.	Parent=comp143233_c0_seq1.mrna1;Target=comp143233_c0_seq1 1198 1277 +
Chr1	stalkie_big_nohaplotig	CDS	27617732	27617869	.	+	0	Parent=comp143233_c0_seq1.mrna1
Chr1	gffcl	locus	27630793	27631256	.	+	.	ID=RLOC_00006731;geneIDs=comp113870_c0_seq1.path1;transcripts=comp113870_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27630793	27631256	.	+	.	ID=comp113870_c0_seq1.mrna1;geneID=comp113870_c0_seq1.path1;Name=comp113870_c0_seq1;Dir=indeterminatecoverage=97.3;identity=92.9;matches=431;mismatches=33;indels=0;unknowns=0;Target=comp113870_c0_seq1 464 1 .;CDS_Target=comp113870_c0_seq1 162 70 .;locus=RLOC_00006731
Chr1	stalkie_big_nohaplotig	exon	27630793	27631256	92	+	.	Parent=comp113870_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27630862	27630954	.	+	0	Parent=comp113870_c0_seq1.mrna1
Chr1	gffcl	locus	27672967	27673547	.	+	.	ID=RLOC_00006732;geneIDs=comp151915_c0_seq1.path1;transcripts=comp151915_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27672967	27673547	.	+	.	ID=comp151915_c0_seq1.mrna1;geneID=comp151915_c0_seq1.path1;Name=comp151915_c0_seq1;Dir=indeterminatecoverage=96.4;identity=98.6;matches=573;mismatches=8;indels=0;unknowns=0;Target=comp151915_c0_seq1 603 23 .;CDS_Target=comp151915_c0_seq1 341 108 .;locus=RLOC_00006732
Chr1	stalkie_big_nohaplotig	exon	27672967	27673547	98	+	.	Parent=comp151915_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27673052	27673285	.	+	0	Parent=comp151915_c0_seq1.mrna1
Chr1	gffcl	locus	27674022	27677619	.	-	.	ID=RLOC_00006733;geneIDs=ORF42.path1;transcripts=ORF42.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27674022	27677619	.	-	.	ID=ORF42.mrna1;geneID=ORF42.path1;Name=ORF42;Dir=indeterminatecoverage=100.0;identity=99.3;matches=3576;mismatches=16;indels=8;unknowns=0;Target=ORF42 3594 1 .;CDS_Target=ORF42 296 3 .;locus=RLOC_00006733
Chr1	stalkie_big_nohaplotig	exon	27674022	27677619	99	-	.	Parent=ORF42.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27677325	27677617	.	-	0	Parent=ORF42.mrna1
Chr1	gffcl	locus	27692006	27693071	.	+	.	ID=RLOC_00006734;geneIDs=comp153346_c0_seq1.path1;transcripts=comp153346_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27692006	27693071	.	+	.	ID=comp153346_c0_seq1.mrna1;geneID=comp153346_c0_seq1.path1;Name=comp153346_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.3;matches=1048;mismatches=18;indels=0;unknowns=0;Target=comp153346_c0_seq1 1069 4 .;CDS_Target=comp153346_c0_seq1 951 229 .;locus=RLOC_00006734
Chr1	stalkie_big_nohaplotig	exon	27692006	27693071	98	+	.	Parent=comp153346_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27692231	27692953	.	+	0	Parent=comp153346_c0_seq1.mrna1
Chr1	gffcl	locus	27706025	27707090	.	-	.	ID=RLOC_00006735;geneIDs=comp153346_c0_seq1.path2;transcripts=comp153346_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	27706025	27707090	.	-	.	ID=comp153346_c0_seq1.mrna2;geneID=comp153346_c0_seq1.path2;Name=comp153346_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.3;matches=1048;mismatches=18;indels=0;unknowns=0;Target=comp153346_c0_seq1 1069 4 .;CDS_Target=comp153346_c0_seq1 951 229 .;locus=RLOC_00006735
Chr1	stalkie_big_nohaplotig	exon	27706025	27707090	98	-	.	Parent=comp153346_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	27706143	27706865	.	-	0	Parent=comp153346_c0_seq1.mrna2
Chr1	gffcl	locus	27734940	27735592	.	+	.	ID=RLOC_00006736;geneIDs=comp149940_c0_seq1.path1;transcripts=comp149940_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27734940	27735592	.	+	.	ID=comp149940_c0_seq1.mrna1;geneID=comp149940_c0_seq1.path1;Name=comp149940_c0_seq1;Dir=indeterminatecoverage=89.1;identity=96.7;matches=635;mismatches=0;indels=22;unknowns=0;Target=comp149940_c0_seq1 717 79 .;CDS_Target=comp149940_c0_seq1 578 504 .;locus=RLOC_00006736
Chr1	stalkie_big_nohaplotig	exon	27734940	27735592	96	+	.	Parent=comp149940_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27735379	27735453	.	+	0	Parent=comp149940_c0_seq1.mrna1
Chr1	gffcl	locus	27745289	27745633	.	+	.	ID=RLOC_00006737;geneIDs=comp152920_c1_seq1.path1;transcripts=comp152920_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27745289	27745633	.	+	.	ID=comp152920_c1_seq1.mrna1;geneID=comp152920_c1_seq1.path1;Name=comp152920_c1_seq1;Dir=indeterminatecoverage=95.3;identity=99.4;matches=343;mismatches=1;indels=1;unknowns=0;Target=comp152920_c1_seq1 345 2 .;CDS_Target=comp152920_c1_seq1 189 100 .;locus=RLOC_00006737
Chr1	stalkie_big_nohaplotig	exon	27745289	27745633	99	+	.	Parent=comp152920_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27745387	27745477	.	+	0	Parent=comp152920_c1_seq1.mrna1
Chr1	gffcl	locus	27756106	27756155	.	+	.	ID=RLOC_00006738;geneIDs=comp162010_c0_seq1.path1;transcripts=comp162010_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27756106	27756155	.	+	.	ID=comp162010_c0_seq1.mrna1;geneID=comp162010_c0_seq1.path1;Name=comp162010_c0_seq1;Dir=indeterminatecoverage=3.2;identity=100.0;matches=50;mismatches=0;indels=0;unknowns=0;Target=comp162010_c0_seq1 50 1 .;locus=RLOC_00006738
Chr1	stalkie_big_nohaplotig	exon	27756106	27756155	100	+	.	Parent=comp162010_c0_seq1.mrna1
Chr1	gffcl	locus	27760421	27761441	.	+	.	ID=RLOC_00006739;geneIDs=comp159093_c0_seq1.path1;transcripts=comp159093_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27760421	27761441	.	+	.	ID=comp159093_c0_seq1.mrna1;geneID=comp159093_c0_seq1.path1;Name=comp159093_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=999;mismatches=16;indels=12;unknowns=0;Target=comp159093_c0_seq1 1021 1 .;CDS_Target=comp159093_c0_seq1 1002 889 .;locus=RLOC_00006739
Chr1	stalkie_big_nohaplotig	exon	27760421	27761441	97	+	.	Parent=comp159093_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27761309	27761422	.	+	0	Parent=comp159093_c0_seq1.mrna1
Chr1	gffcl	locus	27825083	27825286	.	-	.	ID=RLOC_00006740;geneIDs=comp135893_c0_seq1.path2;transcripts=comp135893_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	27825083	27825286	.	-	.	ID=comp135893_c0_seq1.mrna2;geneID=comp135893_c0_seq1.path2;Name=comp135893_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=199;mismatches=5;indels=0;unknowns=0;Target=comp135893_c0_seq1 204 1 .;CDS_Target=comp135893_c0_seq1 202 2 .;locus=RLOC_00006740
Chr1	stalkie_big_nohaplotig	exon	27825083	27825286	97	-	.	Parent=comp135893_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	27825085	27825285	.	-	0	Parent=comp135893_c0_seq1.mrna2
Chr1	gffcl	locus	27896542	27902134	.	-	.	ID=RLOC_00006741;geneIDs=comp163733_c1_seq1.path1;transcripts=comp163733_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27896542	27902134	.	-	.	ID=comp163733_c1_seq1.mrna1;geneID=comp163733_c1_seq1.path1;Name=comp163733_c1_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=1866;mismatches=9;indels=0;unknowns=0;locus=RLOC_00006741
Chr1	stalkie_big_nohaplotig	exon	27896542	27897312	99	-	.	Parent=comp163733_c1_seq1.mrna1;Target=comp163733_c1_seq1 1 771 -
Chr1	stalkie_big_nohaplotig	exon	27897376	27897858	99	-	.	Parent=comp163733_c1_seq1.mrna1;Target=comp163733_c1_seq1 772 1254 -
Chr1	stalkie_big_nohaplotig	exon	27897921	27898145	100	-	.	Parent=comp163733_c1_seq1.mrna1;Target=comp163733_c1_seq1 1255 1479 -
Chr1	stalkie_big_nohaplotig	exon	27899236	27899375	99	-	.	Parent=comp163733_c1_seq1.mrna1;Target=comp163733_c1_seq1 1480 1619 -
Chr1	stalkie_big_nohaplotig	exon	27899438	27899556	99	-	.	Parent=comp163733_c1_seq1.mrna1;Target=comp163733_c1_seq1 1620 1738 -
Chr1	stalkie_big_nohaplotig	exon	27899626	27899736	100	-	.	Parent=comp163733_c1_seq1.mrna1;Target=comp163733_c1_seq1 1739 1849 -
Chr1	stalkie_big_nohaplotig	exon	27902109	27902134	100	-	.	Parent=comp163733_c1_seq1.mrna1;Target=comp163733_c1_seq1 1850 1875 -
Chr1	stalkie_big_nohaplotig	CDS	27897220	27897312	.	-	0	Parent=comp163733_c1_seq1.mrna1;Target=comp163733_c1_seq1 679 771 .
Chr1	stalkie_big_nohaplotig	CDS	27897376	27897858	.	-	0	Parent=comp163733_c1_seq1.mrna1;Target=comp163733_c1_seq1 772 1254 .
Chr1	stalkie_big_nohaplotig	CDS	27897921	27898145	.	-	0	Parent=comp163733_c1_seq1.mrna1;Target=comp163733_c1_seq1 1255 1479 .
Chr1	stalkie_big_nohaplotig	CDS	27899236	27899375	.	-	2	Parent=comp163733_c1_seq1.mrna1;Target=comp163733_c1_seq1 1480 1619 .
Chr1	stalkie_big_nohaplotig	CDS	27899438	27899556	.	-	1	Parent=comp163733_c1_seq1.mrna1;Target=comp163733_c1_seq1 1620 1738 .
Chr1	stalkie_big_nohaplotig	CDS	27899626	27899736	.	-	1	Parent=comp163733_c1_seq1.mrna1;Target=comp163733_c1_seq1 1739 1849 .
Chr1	stalkie_big_nohaplotig	CDS	27902109	27902134	.	-	0	Parent=comp163733_c1_seq1.mrna1;Target=comp163733_c1_seq1 1850 1875 .
Chr1	gffcl	locus	27913552	27919368	.	-	.	ID=RLOC_00006742;geneIDs=FBgn0261041.path1;transcripts=FBgn0261041.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27913552	27919368	.	-	.	ID=FBgn0261041.mrna1;geneID=FBgn0261041.path1;Name=FBgn0261041;Dir=sensecoverage=100.0;identity=99.7;matches=1349;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006742
Chr1	stalkie_big_nohaplotig	exon	27913552	27913935	100	-	.	Parent=FBgn0261041.mrna1;Target=FBgn0261041 970 1353 +
Chr1	stalkie_big_nohaplotig	exon	27915975	27916366	99	-	.	Parent=FBgn0261041.mrna1;Target=FBgn0261041 578 969 +
Chr1	stalkie_big_nohaplotig	exon	27917123	27917390	100	-	.	Parent=FBgn0261041.mrna1;Target=FBgn0261041 310 577 +
Chr1	stalkie_big_nohaplotig	exon	27917504	27917608	100	-	.	Parent=FBgn0261041.mrna1;Target=FBgn0261041 205 309 +
Chr1	stalkie_big_nohaplotig	exon	27919108	27919189	97	-	.	Parent=FBgn0261041.mrna1;Target=FBgn0261041 123 204 +
Chr1	stalkie_big_nohaplotig	exon	27919247	27919368	100	-	.	Parent=FBgn0261041.mrna1;Target=FBgn0261041 1 122 +
Chr1	stalkie_big_nohaplotig	CDS	27913552	27913935	.	-	0	Parent=FBgn0261041.mrna1;Target=FBgn0261041 970 1353 +
Chr1	stalkie_big_nohaplotig	CDS	27915975	27916366	.	-	2	Parent=FBgn0261041.mrna1;Target=FBgn0261041 578 969 +
Chr1	stalkie_big_nohaplotig	CDS	27917123	27917390	.	-	0	Parent=FBgn0261041.mrna1;Target=FBgn0261041 310 577 +
Chr1	stalkie_big_nohaplotig	CDS	27917504	27917608	.	-	0	Parent=FBgn0261041.mrna1;Target=FBgn0261041 205 309 +
Chr1	stalkie_big_nohaplotig	CDS	27919108	27919189	.	-	1	Parent=FBgn0261041.mrna1;Target=FBgn0261041 123 204 +
Chr1	stalkie_big_nohaplotig	CDS	27919247	27919368	.	-	0	Parent=FBgn0261041.mrna1;Target=FBgn0261041 1 122 +
Chr1	gffcl	locus	27923287	27924784	.	-	.	ID=RLOC_00006743;geneIDs=comp148838_c0_seq1.path1;transcripts=comp148838_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27923287	27924784	.	-	.	ID=comp148838_c0_seq1.mrna1;geneID=comp148838_c0_seq1.path1;Name=comp148838_c0_seq1;Dir=antisensecoverage=99.8;identity=99.3;matches=1179;mismatches=8;indels=0;unknowns=0;locus=RLOC_00006743
Chr1	stalkie_big_nohaplotig	exon	27923287	27923469	99	-	.	Parent=comp148838_c0_seq1.mrna1;Target=comp148838_c0_seq1 3 185 -
Chr1	stalkie_big_nohaplotig	exon	27923521	27923679	98	-	.	Parent=comp148838_c0_seq1.mrna1;Target=comp148838_c0_seq1 186 344 -
Chr1	stalkie_big_nohaplotig	exon	27923751	27924154	99	-	.	Parent=comp148838_c0_seq1.mrna1;Target=comp148838_c0_seq1 345 748 -
Chr1	stalkie_big_nohaplotig	exon	27924224	27924310	97	-	.	Parent=comp148838_c0_seq1.mrna1;Target=comp148838_c0_seq1 749 835 -
Chr1	stalkie_big_nohaplotig	exon	27924379	27924564	99	-	.	Parent=comp148838_c0_seq1.mrna1;Target=comp148838_c0_seq1 836 1021 -
Chr1	stalkie_big_nohaplotig	exon	27924617	27924784	100	-	.	Parent=comp148838_c0_seq1.mrna1;Target=comp148838_c0_seq1 1022 1189 -
Chr1	stalkie_big_nohaplotig	CDS	27924098	27924154	.	-	0	Parent=comp148838_c0_seq1.mrna1;Target=comp148838_c0_seq1 692 748 .
Chr1	stalkie_big_nohaplotig	CDS	27924224	27924310	.	-	0	Parent=comp148838_c0_seq1.mrna1;Target=comp148838_c0_seq1 749 835 .
Chr1	stalkie_big_nohaplotig	CDS	27924379	27924564	.	-	0	Parent=comp148838_c0_seq1.mrna1;Target=comp148838_c0_seq1 836 1021 .
Chr1	stalkie_big_nohaplotig	CDS	27924617	27924637	.	-	0	Parent=comp148838_c0_seq1.mrna1;Target=comp148838_c0_seq1 1022 1042 .
Chr1	gffcl	locus	27928429	27929385	.	-	.	ID=RLOC_00006744;geneIDs=FBgn0036052.1.path1;transcripts=FBgn0036052.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27928429	27929385	.	-	.	ID=FBgn0036052.1.mrna1;geneID=FBgn0036052.1.path1;Name=FBgn0036052.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=956;mismatches=1;indels=0;unknowns=0;Target=FBgn0036052.1 957 1 .;locus=RLOC_00006744
Chr1	stalkie_big_nohaplotig	exon	27928429	27929385	99	-	.	Parent=FBgn0036052.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27928429	27929385	.	-	0	Parent=FBgn0036052.1.mrna1
Chr1	gffcl	locus	27932370	27934196	.	-	.	ID=RLOC_00006745;geneIDs=FBgn0036141.1.path1;transcripts=FBgn0036141.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27932370	27934196	.	-	.	ID=FBgn0036141.1.mrna1;geneID=FBgn0036141.1.path1;Name=FBgn0036141.1;Dir=sensecoverage=100.0;identity=99.5;matches=1690;mismatches=8;indels=0;unknowns=0;locus=RLOC_00006745
Chr1	stalkie_big_nohaplotig	exon	27932370	27932743	100	-	.	Parent=FBgn0036141.1.mrna1;Target=FBgn0036141.1 1325 1698 +
Chr1	stalkie_big_nohaplotig	exon	27932817	27933679	99	-	.	Parent=FBgn0036141.1.mrna1;Target=FBgn0036141.1 462 1324 +
Chr1	stalkie_big_nohaplotig	exon	27933736	27934196	100	-	.	Parent=FBgn0036141.1.mrna1;Target=FBgn0036141.1 1 461 +
Chr1	stalkie_big_nohaplotig	CDS	27932370	27932743	.	-	2	Parent=FBgn0036141.1.mrna1;Target=FBgn0036141.1 1325 1698 +
Chr1	stalkie_big_nohaplotig	CDS	27932817	27933679	.	-	1	Parent=FBgn0036141.1.mrna1;Target=FBgn0036141.1 462 1324 +
Chr1	stalkie_big_nohaplotig	CDS	27933736	27934196	.	-	0	Parent=FBgn0036141.1.mrna1;Target=FBgn0036141.1 1 461 +
Chr1	gffcl	locus	27939037	27944734	.	-	.	ID=RLOC_00006746;geneIDs=FBgn0036053.1.path1;transcripts=FBgn0036053.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27939037	27944734	.	-	.	ID=FBgn0036053.1.mrna1;geneID=FBgn0036053.1.path1;Name=FBgn0036053.1;Dir=sensecoverage=100.0;identity=99.5;matches=2711;mismatches=13;indels=0;unknowns=0;locus=RLOC_00006746
Chr1	stalkie_big_nohaplotig	exon	27939037	27939172	99	-	.	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 2589 2724 +
Chr1	stalkie_big_nohaplotig	exon	27939244	27939337	98	-	.	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 2495 2588 +
Chr1	stalkie_big_nohaplotig	exon	27939401	27939524	99	-	.	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 2371 2494 +
Chr1	stalkie_big_nohaplotig	exon	27940010	27940133	100	-	.	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 2247 2370 +
Chr1	stalkie_big_nohaplotig	exon	27940193	27940280	98	-	.	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 2159 2246 +
Chr1	stalkie_big_nohaplotig	exon	27940343	27940891	99	-	.	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 1610 2158 +
Chr1	stalkie_big_nohaplotig	exon	27940959	27941062	100	-	.	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 1506 1609 +
Chr1	stalkie_big_nohaplotig	exon	27941190	27941384	100	-	.	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 1311 1505 +
Chr1	stalkie_big_nohaplotig	exon	27941444	27941709	98	-	.	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 1045 1310 +
Chr1	stalkie_big_nohaplotig	exon	27941771	27942124	99	-	.	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 691 1044 +
Chr1	stalkie_big_nohaplotig	exon	27942183	27942311	100	-	.	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 562 690 +
Chr1	stalkie_big_nohaplotig	exon	27943822	27943992	100	-	.	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 391 561 +
Chr1	stalkie_big_nohaplotig	exon	27944182	27944474	99	-	.	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 98 390 +
Chr1	stalkie_big_nohaplotig	exon	27944638	27944734	100	-	.	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 1 97 +
Chr1	stalkie_big_nohaplotig	CDS	27939037	27939172	.	-	1	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 2589 2724 +
Chr1	stalkie_big_nohaplotig	CDS	27939244	27939337	.	-	2	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 2495 2588 +
Chr1	stalkie_big_nohaplotig	CDS	27939401	27939524	.	-	0	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 2371 2494 +
Chr1	stalkie_big_nohaplotig	CDS	27940010	27940133	.	-	1	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 2247 2370 +
Chr1	stalkie_big_nohaplotig	CDS	27940193	27940280	.	-	2	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 2159 2246 +
Chr1	stalkie_big_nohaplotig	CDS	27940343	27940891	.	-	2	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 1610 2158 +
Chr1	stalkie_big_nohaplotig	CDS	27940959	27941062	.	-	1	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 1506 1609 +
Chr1	stalkie_big_nohaplotig	CDS	27941190	27941384	.	-	1	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 1311 1505 +
Chr1	stalkie_big_nohaplotig	CDS	27941444	27941709	.	-	0	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 1045 1310 +
Chr1	stalkie_big_nohaplotig	CDS	27941771	27942124	.	-	0	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 691 1044 +
Chr1	stalkie_big_nohaplotig	CDS	27942183	27942311	.	-	0	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 562 690 +
Chr1	stalkie_big_nohaplotig	CDS	27943822	27943992	.	-	0	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 391 561 +
Chr1	stalkie_big_nohaplotig	CDS	27944182	27944474	.	-	2	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 98 390 +
Chr1	stalkie_big_nohaplotig	CDS	27944638	27944734	.	-	0	Parent=FBgn0036053.1.mrna1;Target=FBgn0036053.1 1 97 +
Chr1	gffcl	locus	27954447	27955157	.	+	.	ID=RLOC_00006748;geneIDs=Dp_FBgn0250603.path6;transcripts=Dp_FBgn0250603.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	27954447	27955157	.	+	.	ID=Dp_FBgn0250603.mrna6;geneID=Dp_FBgn0250603.path6;Name=Dp_FBgn0250603;Dir=indeterminatecoverage=100.0;identity=98.5;matches=700;mismatches=11;indels=0;unknowns=0;Target=Dp_FBgn0250603 711 1 .;locus=RLOC_00006748
Chr1	stalkie_big_nohaplotig	exon	27954447	27955157	98	+	.	Parent=Dp_FBgn0250603.mrna6
Chr1	stalkie_big_nohaplotig	CDS	27954447	27955157	.	+	0	Parent=Dp_FBgn0250603.mrna6
Chr1	gffcl	locus	27979934	27980624	.	-	.	ID=RLOC_00006749;geneIDs=comp157247_c2_seq1.path1;transcripts=comp157247_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27979934	27980624	.	-	.	ID=comp157247_c2_seq1.mrna1;geneID=comp157247_c2_seq1.path1;Name=comp157247_c2_seq1;Dir=indeterminatecoverage=91.3;identity=98.0;matches=677;mismatches=13;indels=1;unknowns=0;Target=comp157247_c2_seq1 751 62 .;CDS_Target=comp157247_c2_seq1 669 106 .;locus=RLOC_00006749
Chr1	stalkie_big_nohaplotig	exon	27979934	27980624	97	-	.	Parent=comp157247_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27980016	27980579	.	-	0	Parent=comp157247_c2_seq1.mrna1
Chr1	gffcl	locus	27981338	27982602	.	-	.	ID=RLOC_00006750;geneIDs=comp158277_c0_seq1.path1;transcripts=comp158277_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27981338	27982602	.	-	.	ID=comp158277_c0_seq1.mrna1;geneID=comp158277_c0_seq1.path1;Name=comp158277_c0_seq1;Dir=sensecoverage=88.9;identity=98.1;matches=970;mismatches=15;indels=4;unknowns=0;locus=RLOC_00006750
Chr1	stalkie_big_nohaplotig	exon	27981338	27981767	97	-	.	Parent=comp158277_c0_seq1.mrna1;Target=comp158277_c0_seq1 683 1109 +
Chr1	stalkie_big_nohaplotig	exon	27981833	27981874	97	-	.	Parent=comp158277_c0_seq1.mrna1;Target=comp158277_c0_seq1 641 682 +
Chr1	stalkie_big_nohaplotig	exon	27981945	27982414	99	-	.	Parent=comp158277_c0_seq1.mrna1;Target=comp158277_c0_seq1 170 640 +
Chr1	stalkie_big_nohaplotig	exon	27982557	27982602	95	-	.	Parent=comp158277_c0_seq1.mrna1;Target=comp158277_c0_seq1 124 169 +
Chr1	stalkie_big_nohaplotig	CDS	27981762	27981767	.	-	0	Parent=comp158277_c0_seq1.mrna1;Target=comp158277_c0_seq1 683 688 +
Chr1	stalkie_big_nohaplotig	CDS	27981833	27981874	.	-	0	Parent=comp158277_c0_seq1.mrna1;Target=comp158277_c0_seq1 641 682 +
Chr1	stalkie_big_nohaplotig	CDS	27981945	27982109	.	-	0	Parent=comp158277_c0_seq1.mrna1;Target=comp158277_c0_seq1 476 640 +
Chr1	gffcl	locus	27989159	27990039	.	+	.	ID=RLOC_00006751;geneIDs=comp159081_c0_seq1.path1;transcripts=comp159081_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	27989159	27990039	.	+	.	ID=comp159081_c0_seq1.mrna1;geneID=comp159081_c0_seq1.path1;Name=comp159081_c0_seq1;Dir=indeterminatecoverage=99.7;identity=96.3;matches=852;mismatches=26;indels=7;unknowns=0;Target=comp159081_c0_seq1 884 3 .;CDS_Target=comp159081_c0_seq1 609 505 .;locus=RLOC_00006751
Chr1	stalkie_big_nohaplotig	exon	27989159	27990039	96	+	.	Parent=comp159081_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	27989660	27989764	.	+	0	Parent=comp159081_c0_seq1.mrna1
Chr1	gffcl	locus	28023192	28023425	.	-	.	ID=RLOC_00006752;geneIDs=comp113046_c0_seq1.path1;transcripts=comp113046_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28023192	28023425	.	-	.	ID=comp113046_c0_seq1.mrna1;geneID=comp113046_c0_seq1.path1;Name=comp113046_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=232;mismatches=2;indels=0;unknowns=0;Target=comp113046_c0_seq1 234 1 .;CDS_Target=comp113046_c0_seq1 234 139 .;locus=RLOC_00006752
Chr1	stalkie_big_nohaplotig	exon	28023192	28023425	99	-	.	Parent=comp113046_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28023192	28023287	.	-	0	Parent=comp113046_c0_seq1.mrna1
Chr1	gffcl	locus	28045136	28045866	.	+	.	ID=RLOC_00006753;geneIDs=comp135159_c0_seq1.path1;transcripts=comp135159_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28045136	28045866	.	+	.	ID=comp135159_c0_seq1.mrna1;geneID=comp135159_c0_seq1.path1;Name=comp135159_c0_seq1;Dir=antisensecoverage=98.0;identity=98.1;matches=662;mismatches=13;indels=0;unknowns=0;locus=RLOC_00006753
Chr1	stalkie_big_nohaplotig	exon	28045136	28045398	97	+	.	Parent=comp135159_c0_seq1.mrna1;Target=comp135159_c0_seq1 421 683 -
Chr1	stalkie_big_nohaplotig	exon	28045455	28045866	98	+	.	Parent=comp135159_c0_seq1.mrna1;Target=comp135159_c0_seq1 9 420 -
Chr1	stalkie_big_nohaplotig	CDS	28045231	28045398	.	+	0	Parent=comp135159_c0_seq1.mrna1;Target=comp135159_c0_seq1 421 588 .
Chr1	stalkie_big_nohaplotig	CDS	28045455	28045544	.	+	0	Parent=comp135159_c0_seq1.mrna1;Target=comp135159_c0_seq1 331 420 .
Chr1	gffcl	locus	28050563	28051203	.	-	.	ID=RLOC_00006754;geneIDs=comp152983_c0_seq1.path1;transcripts=comp152983_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28050563	28051203	.	-	.	ID=comp152983_c0_seq1.mrna1;geneID=comp152983_c0_seq1.path1;Name=comp152983_c0_seq1;Dir=indeterminatecoverage=96.6;identity=97.9;matches=638;mismatches=3;indels=11;unknowns=0;Target=comp152983_c0_seq1 675 24 .;CDS_Target=comp152983_c0_seq1 263 222 .;locus=RLOC_00006754
Chr1	stalkie_big_nohaplotig	exon	28050563	28051203	97	-	.	Parent=comp152983_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28050975	28051015	.	-	0	Parent=comp152983_c0_seq1.mrna1
Chr1	gffcl	locus	28077777	28078437	.	+	.	ID=RLOC_00006755;geneIDs=comp137772_c0_seq1.path1;transcripts=comp137772_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28077777	28078437	.	+	.	ID=comp137772_c0_seq1.mrna1;geneID=comp137772_c0_seq1.path1;Name=comp137772_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.0;matches=642;mismatches=10;indels=10;unknowns=0;Target=comp137772_c0_seq1 653 1 .;CDS_Target=comp137772_c0_seq1 617 483 .;locus=RLOC_00006755
Chr1	stalkie_big_nohaplotig	exon	28077777	28078437	96	+	.	Parent=comp137772_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28078258	28078401	.	+	0	Parent=comp137772_c0_seq1.mrna1
Chr1	gffcl	locus	28129320	28129397	.	+	.	ID=RLOC_00006756;geneIDs=FBgn0036043.1.path1;transcripts=FBgn0036043.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28129320	28129397	.	+	.	ID=FBgn0036043.1.mrna1;geneID=FBgn0036043.1.path1;Name=FBgn0036043.1;Dir=indeterminatecoverage=2.1;identity=100.0;matches=78;mismatches=0;indels=0;unknowns=0;Target=FBgn0036043.1 78 1 .;locus=RLOC_00006756
Chr1	stalkie_big_nohaplotig	exon	28129320	28129397	100	+	.	Parent=FBgn0036043.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28129320	28129397	.	+	0	Parent=FBgn0036043.1.mrna1
Chr1	gffcl	locus	28149470	28149910	.	-	.	ID=RLOC_00006757;geneIDs=comp146761_c0_seq1.path1;transcripts=comp146761_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28149470	28149910	.	-	.	ID=comp146761_c0_seq1.mrna1;geneID=comp146761_c0_seq1.path1;Name=comp146761_c0_seq1;Dir=indeterminatecoverage=94.6;identity=98.0;matches=432;mismatches=9;indels=0;unknowns=0;Target=comp146761_c0_seq1 443 3 .;CDS_Target=comp146761_c0_seq1 442 386 .;locus=RLOC_00006757
Chr1	stalkie_big_nohaplotig	exon	28149470	28149910	97	-	.	Parent=comp146761_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28149471	28149527	.	-	0	Parent=comp146761_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28175048	28980129	.	+	.	ID=comp161503_c1_seq1.mrna1;geneID=comp161503_c1_seq1.path1;Name=comp161503_c1_seq1;Dir=indeterminatecoverage=93.3;identity=97.4;matches=4829;mismatches=66;indels=65;unknowns=0;locus=RLOC_00006758
Chr1	stalkie_big_nohaplotig	exon	28175048	28176054	99	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 1008 1 .
Chr1	stalkie_big_nohaplotig	exon	28176122	28176352	99	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 1239 1009 .
Chr1	stalkie_big_nohaplotig	exon	28176426	28176620	98	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 1434 1240 .
Chr1	stalkie_big_nohaplotig	exon	28177274	28178575	99	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 2736 1435 .
Chr1	stalkie_big_nohaplotig	exon	28178647	28179021	99	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 3111 2737 .
Chr1	stalkie_big_nohaplotig	exon	28179086	28179274	100	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 3300 3112 .
Chr1	stalkie_big_nohaplotig	exon	28181992	28182228	100	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 3537 3301 .
Chr1	stalkie_big_nohaplotig	exon	28188494	28188634	99	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 3678 3538 .
Chr1	stalkie_big_nohaplotig	exon	28188756	28188998	100	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 3921 3679 .
Chr1	stalkie_big_nohaplotig	exon	28189077	28189235	100	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4080 3922 .
Chr1	stalkie_big_nohaplotig	exon	28191646	28191775	100	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4210 4081 .
Chr1	stalkie_big_nohaplotig	exon	28192168	28192289	99	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4332 4211 .
Chr1	stalkie_big_nohaplotig	exon	28192351	28192496	100	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4478 4333 .
Chr1	stalkie_big_nohaplotig	exon	28192738	28192870	99	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4611 4479 .
Chr1	stalkie_big_nohaplotig	exon	28764371	28764373	100	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4614 4612 .
Chr1	stalkie_big_nohaplotig	exon	28772860	28772870	90	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4625 4615 .
Chr1	stalkie_big_nohaplotig	exon	28776438	28776453	87	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4641 4626 .
Chr1	stalkie_big_nohaplotig	exon	28778243	28778244	100	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4719 4718 .
Chr1	stalkie_big_nohaplotig	exon	28797844	28797848	100	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4724 4720 .
Chr1	stalkie_big_nohaplotig	exon	28809833	28809837	100	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4729 4725 .
Chr1	stalkie_big_nohaplotig	exon	28826030	28826036	100	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4736 4730 .
Chr1	stalkie_big_nohaplotig	exon	28831088	28831098	90	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4747 4737 .
Chr1	stalkie_big_nohaplotig	exon	28846422	28846437	47	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4770 4748 .
Chr1	stalkie_big_nohaplotig	exon	28861947	28861955	100	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4779 4771 .
Chr1	stalkie_big_nohaplotig	exon	28865127	28865130	100	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4783 4780 .
Chr1	stalkie_big_nohaplotig	exon	28871227	28871237	100	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4794 4784 .
Chr1	stalkie_big_nohaplotig	exon	28893574	28893632	54	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4864 4795 .
Chr1	stalkie_big_nohaplotig	exon	28898207	28898216	90	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4874 4865 .
Chr1	stalkie_big_nohaplotig	exon	28905986	28905998	84	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4887 4875 .
Chr1	stalkie_big_nohaplotig	exon	28922795	28922811	48	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4922 4888 .
Chr1	stalkie_big_nohaplotig	exon	28933777	28933783	100	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4929 4923 .
Chr1	stalkie_big_nohaplotig	exon	28948774	28948826	54	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 4973 4930 .
Chr1	stalkie_big_nohaplotig	exon	28954897	28954913	46	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 5005 4974 .
Chr1	stalkie_big_nohaplotig	exon	28955073	28955078	100	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 5011 5006 .
Chr1	stalkie_big_nohaplotig	exon	28966299	28966304	100	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 5017 5012 .
Chr1	stalkie_big_nohaplotig	exon	28980123	28980129	100	+	.	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 5024 5018 .
Chr1	stalkie_big_nohaplotig	CDS	28182024	28182228	.	+	0	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 3537 3333 .
Chr1	stalkie_big_nohaplotig	CDS	28188494	28188531	.	+	2	Parent=comp161503_c1_seq1.mrna1;Target=comp161503_c1_seq1 3575 3538 .
Chr1	stalkie_big_nohaplotig	mRNA	28809674	28813089	.	+	.	ID=comp151685_c0_seq1.mrna1;geneID=comp151685_c0_seq1.path1;Name=comp151685_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=511;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006758
Chr1	stalkie_big_nohaplotig	exon	28809674	28810033	100	+	.	Parent=comp151685_c0_seq1.mrna1;Target=comp151685_c0_seq1 1 360 +
Chr1	stalkie_big_nohaplotig	exon	28812939	28813089	100	+	.	Parent=comp151685_c0_seq1.mrna1;Target=comp151685_c0_seq1 361 511 +
Chr1	stalkie_big_nohaplotig	CDS	28809865	28810033	.	+	0	Parent=comp151685_c0_seq1.mrna1;Target=comp151685_c0_seq1 192 360 +
Chr1	stalkie_big_nohaplotig	CDS	28812939	28813087	.	+	2	Parent=comp151685_c0_seq1.mrna1;Target=comp151685_c0_seq1 361 509 +
Chr1	gffcl	locus	28175986	28192885	.	-	.	ID=RLOC_00006759;geneIDs=FBgn0036043.1.path2;transcripts=FBgn0036043.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	28175986	28192885	.	-	.	ID=FBgn0036043.1.mrna2;geneID=FBgn0036043.1.path2;Name=FBgn0036043.1;Dir=sensecoverage=97.9;identity=99.7;matches=3676;mismatches=11;indels=0;unknowns=0;locus=RLOC_00006759
Chr1	stalkie_big_nohaplotig	exon	28175986	28176054	100	-	.	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 3697 3765 +
Chr1	stalkie_big_nohaplotig	exon	28176122	28176350	99	-	.	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 3468 3696 +
Chr1	stalkie_big_nohaplotig	exon	28176424	28176618	98	-	.	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 3273 3467 +
Chr1	stalkie_big_nohaplotig	exon	28177272	28178575	99	-	.	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 1969 3272 +
Chr1	stalkie_big_nohaplotig	exon	28178647	28179018	99	-	.	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 1597 1968 +
Chr1	stalkie_big_nohaplotig	exon	28179083	28179274	100	-	.	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 1405 1596 +
Chr1	stalkie_big_nohaplotig	exon	28181992	28182228	100	-	.	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 1168 1404 +
Chr1	stalkie_big_nohaplotig	exon	28188494	28188634	99	-	.	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 1027 1167 +
Chr1	stalkie_big_nohaplotig	exon	28188756	28188998	100	-	.	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 784 1026 +
Chr1	stalkie_big_nohaplotig	exon	28189077	28189235	100	-	.	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 625 783 +
Chr1	stalkie_big_nohaplotig	exon	28191646	28191775	100	-	.	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 495 624 +
Chr1	stalkie_big_nohaplotig	exon	28192168	28192289	99	-	.	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 373 494 +
Chr1	stalkie_big_nohaplotig	exon	28192351	28192496	100	-	.	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 227 372 +
Chr1	stalkie_big_nohaplotig	exon	28192738	28192885	99	-	.	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 79 226 +
Chr1	stalkie_big_nohaplotig	CDS	28175986	28176054	.	-	0	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 3697 3765 +
Chr1	stalkie_big_nohaplotig	CDS	28176122	28176350	.	-	1	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 3468 3696 +
Chr1	stalkie_big_nohaplotig	CDS	28176424	28176618	.	-	1	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 3273 3467 +
Chr1	stalkie_big_nohaplotig	CDS	28177272	28178575	.	-	0	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 1969 3272 +
Chr1	stalkie_big_nohaplotig	CDS	28178647	28179018	.	-	0	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 1597 1968 +
Chr1	stalkie_big_nohaplotig	CDS	28179083	28179274	.	-	0	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 1405 1596 +
Chr1	stalkie_big_nohaplotig	CDS	28181992	28182228	.	-	0	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 1168 1404 +
Chr1	stalkie_big_nohaplotig	CDS	28188494	28188634	.	-	0	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 1027 1167 +
Chr1	stalkie_big_nohaplotig	CDS	28188756	28188998	.	-	0	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 784 1026 +
Chr1	stalkie_big_nohaplotig	CDS	28189077	28189235	.	-	0	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 625 783 +
Chr1	stalkie_big_nohaplotig	CDS	28191646	28191775	.	-	1	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 495 624 +
Chr1	stalkie_big_nohaplotig	CDS	28192168	28192289	.	-	0	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 373 494 +
Chr1	stalkie_big_nohaplotig	CDS	28192351	28192496	.	-	2	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 227 372 +
Chr1	stalkie_big_nohaplotig	CDS	28192738	28192885	.	-	0	Parent=FBgn0036043.1.mrna2;Target=FBgn0036043.1 79 226 +
Chr1	gffcl	locus	28179914	28180406	.	+	.	ID=RLOC_00006760;geneIDs=comp148232_c0_seq1.path1;transcripts=comp148232_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28179914	28180406	.	+	.	ID=comp148232_c0_seq1.mrna1;geneID=comp148232_c0_seq1.path1;Name=comp148232_c0_seq1;Dir=indeterminatecoverage=99.2;identity=84.5;matches=424;mismatches=38;indels=40;unknowns=0;Target=comp148232_c0_seq1 471 1 .;CDS_Target=comp148232_c0_seq1 69 1 .;locus=RLOC_00006760
Chr1	stalkie_big_nohaplotig	exon	28179914	28180406	84	+	.	Parent=comp148232_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28179914	28179982	.	+	0	Parent=comp148232_c0_seq1.mrna1
Chr1	gffcl	locus	28182234	28182521	.	+	.	ID=RLOC_00006761;geneIDs=comp118760_c0_seq1.path1;transcripts=comp118760_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28182234	28182521	.	+	.	ID=comp118760_c0_seq1.mrna1;geneID=comp118760_c0_seq1.path1;Name=comp118760_c0_seq1;Dir=indeterminatecoverage=96.3;identity=99.0;matches=286;mismatches=2;indels=1;unknowns=0;Target=comp118760_c0_seq1 300 12 .;CDS_Target=comp118760_c0_seq1 228 73 .;locus=RLOC_00006761
Chr1	stalkie_big_nohaplotig	exon	28182234	28182521	98	+	.	Parent=comp118760_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28182295	28182450	.	+	0	Parent=comp118760_c0_seq1.mrna1
Chr1	gffcl	locus	28182865	28183550	.	-	.	ID=RLOC_00006762;geneIDs=comp149959_c0_seq1.path1;transcripts=comp149959_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28182865	28183550	.	-	.	ID=comp149959_c0_seq1.mrna1;geneID=comp149959_c0_seq1.path1;Name=comp149959_c0_seq1;Dir=indeterminatecoverage=52.6;identity=87.6;matches=601;mismatches=62;indels=23;unknowns=0;Target=comp149959_c0_seq1 1248 586 .;CDS_Target=comp149959_c0_seq1 1200 1069 .;locus=RLOC_00006762
Chr1	stalkie_big_nohaplotig	exon	28182865	28183550	87	-	.	Parent=comp149959_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28182913	28183044	.	-	0	Parent=comp149959_c0_seq1.mrna1
Chr1	gffcl	locus	28183758	28185217	.	+	.	ID=RLOC_00006763;geneIDs=comp159292_c0_seq1.path1;transcripts=comp159292_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28183758	28185217	.	+	.	ID=comp159292_c0_seq1.mrna1;geneID=comp159292_c0_seq1.path1;Name=comp159292_c0_seq1;Dir=indeterminatecoverage=97.2;identity=92.1;matches=1396;mismatches=57;indels=62;unknowns=0;Target=comp159292_c0_seq1 1529 22 .;CDS_Target=comp159292_c0_seq1 950 753 .;locus=RLOC_00006763
Chr1	stalkie_big_nohaplotig	exon	28183758	28185217	92	+	.	Parent=comp159292_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28184442	28184638	.	+	0	Parent=comp159292_c0_seq1.mrna1
Chr1	gffcl	locus	28186202	28187107	.	-	.	ID=RLOC_00006764;geneIDs=comp159641_c0_seq1.path1;transcripts=comp159641_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28186202	28187107	.	-	.	ID=comp159641_c0_seq1.mrna1;geneID=comp159641_c0_seq1.path1;Name=comp159641_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.8;matches=880;mismatches=23;indels=45;unknowns=0;Target=comp159641_c0_seq1 945 1 .;CDS_Target=comp159641_c0_seq1 252 115 .;locus=RLOC_00006764
Chr1	stalkie_big_nohaplotig	exon	28186202	28187107	92	-	.	Parent=comp159641_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28186873	28186993	.	-	0	Parent=comp159641_c0_seq1.mrna1
Chr1	gffcl	locus	28227643	28229998	.	-	.	ID=RLOC_00006765;geneIDs=ORF2838.path1,comp157752_c0_seq1.path1;transcripts=ORF2838.mrna1,comp157752_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28227643	28228495	.	-	.	ID=ORF2838.mrna1;geneID=ORF2838.path1;Name=ORF2838;Dir=sensecoverage=99.7;identity=98.0;matches=780;mismatches=16;indels=0;unknowns=0;locus=RLOC_00006765
Chr1	stalkie_big_nohaplotig	exon	28227643	28228260	97	-	.	Parent=ORF2838.mrna1;Target=ORF2838 181 798 +
Chr1	stalkie_big_nohaplotig	exon	28228318	28228495	99	-	.	Parent=ORF2838.mrna1;Target=ORF2838 3 180 +
Chr1	stalkie_big_nohaplotig	CDS	28227643	28228260	.	-	0	Parent=ORF2838.mrna1;Target=ORF2838 181 798 +
Chr1	stalkie_big_nohaplotig	CDS	28228318	28228494	.	-	0	Parent=ORF2838.mrna1;Target=ORF2838 4 180 +
Chr1	stalkie_big_nohaplotig	mRNA	28227643	28229998	.	-	.	ID=comp157752_c0_seq1.mrna1;geneID=comp157752_c0_seq1.path1;Name=comp157752_c0_seq1;Dir=sensecoverage=99.8;identity=98.1;matches=1115;mismatches=22;indels=0;unknowns=0;Target=comp157752_c0_seq1 542 1138 +;locus=RLOC_00006765
Chr1	stalkie_big_nohaplotig	exon	28227643	28228503	97	-	.	Parent=comp157752_c0_seq1.mrna1;Target=comp157752_c0_seq1 278 1138 +
Chr1	stalkie_big_nohaplotig	exon	28228813	28228891	100	-	.	Parent=comp157752_c0_seq1.mrna1;Target=comp157752_c0_seq1 199 277 +
Chr1	stalkie_big_nohaplotig	exon	28229745	28229820	100	-	.	Parent=comp157752_c0_seq1.mrna1;Target=comp157752_c0_seq1 123 198 +
Chr1	stalkie_big_nohaplotig	exon	28229878	28229998	96	-	.	Parent=comp157752_c0_seq1.mrna1;Target=comp157752_c0_seq1 2 122 +
Chr1	stalkie_big_nohaplotig	CDS	28227643	28228239	.	-	0	Parent=comp157752_c0_seq1.mrna1
Chr1	gffcl	locus	28234741	28235446	.	+	.	ID=RLOC_00006766;geneIDs=comp149960_c0_seq1.path1;transcripts=comp149960_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28234741	28235446	.	+	.	ID=comp149960_c0_seq1.mrna1;geneID=comp149960_c0_seq1.path1;Name=comp149960_c0_seq1;Dir=sensecoverage=100.0;identity=98.2;matches=638;mismatches=10;indels=2;unknowns=0;locus=RLOC_00006766
Chr1	stalkie_big_nohaplotig	exon	28234741	28235005	98	+	.	Parent=comp149960_c0_seq1.mrna1;Target=comp149960_c0_seq1 1 263 +
Chr1	stalkie_big_nohaplotig	exon	28235062	28235446	97	+	.	Parent=comp149960_c0_seq1.mrna1;Target=comp149960_c0_seq1 264 648 +
Chr1	stalkie_big_nohaplotig	CDS	28234829	28235005	.	+	0	Parent=comp149960_c0_seq1.mrna1;Target=comp149960_c0_seq1 87 263 +
Chr1	stalkie_big_nohaplotig	CDS	28235062	28235133	.	+	0	Parent=comp149960_c0_seq1.mrna1;Target=comp149960_c0_seq1 264 335 +
Chr1	gffcl	locus	28250394	28253252	.	-	.	ID=RLOC_00006767;geneIDs=comp156792_c0_seq1.path1;transcripts=comp156792_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28250394	28253252	.	-	.	ID=comp156792_c0_seq1.mrna1;geneID=comp156792_c0_seq1.path1;Name=comp156792_c0_seq1;Dir=sensecoverage=99.6;identity=98.3;matches=1014;mismatches=18;indels=0;unknowns=0;locus=RLOC_00006767
Chr1	stalkie_big_nohaplotig	exon	28250394	28250786	98	-	.	Parent=comp156792_c0_seq1.mrna1;Target=comp156792_c0_seq1 640 1032 +
Chr1	stalkie_big_nohaplotig	exon	28250844	28251040	98	-	.	Parent=comp156792_c0_seq1.mrna1;Target=comp156792_c0_seq1 443 639 +
Chr1	stalkie_big_nohaplotig	exon	28252811	28253252	97	-	.	Parent=comp156792_c0_seq1.mrna1;Target=comp156792_c0_seq1 1 442 +
Chr1	stalkie_big_nohaplotig	CDS	28250475	28250786	.	-	0	Parent=comp156792_c0_seq1.mrna1;Target=comp156792_c0_seq1 640 951 +
Chr1	stalkie_big_nohaplotig	CDS	28250844	28251023	.	-	0	Parent=comp156792_c0_seq1.mrna1;Target=comp156792_c0_seq1 460 639 +
Chr1	gffcl	locus	28270514	28271479	.	-	.	ID=RLOC_00006768;geneIDs=ORF3006.path1;transcripts=ORF3006.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28270514	28271479	.	-	.	ID=ORF3006.mrna1;geneID=ORF3006.path1;Name=ORF3006;Dir=sensecoverage=100.0;identity=99.4;matches=775;mismatches=5;indels=0;unknowns=0;locus=RLOC_00006768
Chr1	stalkie_big_nohaplotig	exon	28270514	28270563	100	-	.	Parent=ORF3006.mrna1;Target=ORF3006 731 780 +
Chr1	stalkie_big_nohaplotig	exon	28270681	28271140	99	-	.	Parent=ORF3006.mrna1;Target=ORF3006 271 730 +
Chr1	stalkie_big_nohaplotig	exon	28271210	28271479	98	-	.	Parent=ORF3006.mrna1;Target=ORF3006 1 270 +
Chr1	stalkie_big_nohaplotig	CDS	28270514	28270563	.	-	2	Parent=ORF3006.mrna1;Target=ORF3006 731 780 +
Chr1	stalkie_big_nohaplotig	CDS	28270681	28271140	.	-	0	Parent=ORF3006.mrna1;Target=ORF3006 271 730 +
Chr1	stalkie_big_nohaplotig	CDS	28271210	28271479	.	-	0	Parent=ORF3006.mrna1;Target=ORF3006 1 270 +
Chr1	gffcl	locus	28295231	28296725	.	-	.	ID=RLOC_00006769;geneIDs=comp145501_c0_seq1.path2;transcripts=comp145501_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	28295231	28296725	.	-	.	ID=comp145501_c0_seq1.mrna2;geneID=comp145501_c0_seq1.path2;Name=comp145501_c0_seq1;Dir=sensecoverage=100.0;identity=98.5;matches=642;mismatches=10;indels=0;unknowns=0;locus=RLOC_00006769
Chr1	stalkie_big_nohaplotig	exon	28295231	28295568	97	-	.	Parent=comp145501_c0_seq1.mrna2;Target=comp145501_c0_seq1 315 652 +
Chr1	stalkie_big_nohaplotig	exon	28296340	28296387	97	-	.	Parent=comp145501_c0_seq1.mrna2;Target=comp145501_c0_seq1 267 314 +
Chr1	stalkie_big_nohaplotig	exon	28296460	28296725	99	-	.	Parent=comp145501_c0_seq1.mrna2;Target=comp145501_c0_seq1 1 266 +
Chr1	stalkie_big_nohaplotig	CDS	28295479	28295568	.	-	0	Parent=comp145501_c0_seq1.mrna2;Target=comp145501_c0_seq1 315 404 +
Chr1	stalkie_big_nohaplotig	CDS	28296340	28296387	.	-	0	Parent=comp145501_c0_seq1.mrna2;Target=comp145501_c0_seq1 267 314 +
Chr1	stalkie_big_nohaplotig	CDS	28296460	28296630	.	-	0	Parent=comp145501_c0_seq1.mrna2;Target=comp145501_c0_seq1 96 266 +
Chr1	gffcl	locus	28298821	28299285	.	-	.	ID=RLOC_00006770;geneIDs=comp138658_c0_seq1.path2;transcripts=comp138658_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	28298821	28299285	.	-	.	ID=comp138658_c0_seq1.mrna2;geneID=comp138658_c0_seq1.path2;Name=comp138658_c0_seq1;Dir=indeterminatecoverage=98.9;identity=98.3;matches=457;mismatches=8;indels=0;unknowns=0;Target=comp138658_c0_seq1 466 2 .;CDS_Target=comp138658_c0_seq1 415 209 .;locus=RLOC_00006770
Chr1	stalkie_big_nohaplotig	exon	28298821	28299285	98	-	.	Parent=comp138658_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	28298872	28299078	.	-	0	Parent=comp138658_c0_seq1.mrna2
Chr1	gffcl	locus	28302979	28304083	.	-	.	ID=RLOC_00006771;geneIDs=comp159427_c0_seq1.path1;transcripts=comp159427_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28302979	28304083	.	-	.	ID=comp159427_c0_seq1.mrna1;geneID=comp159427_c0_seq1.path1;Name=comp159427_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.4;matches=1099;mismatches=6;indels=1;unknowns=0;Target=comp159427_c0_seq1 1106 1 .;CDS_Target=comp159427_c0_seq1 542 405 .;locus=RLOC_00006771
Chr1	stalkie_big_nohaplotig	exon	28302979	28304083	99	-	.	Parent=comp159427_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28303543	28303679	.	-	0	Parent=comp159427_c0_seq1.mrna1
Chr1	gffcl	locus	28307963	28308281	.	+	.	ID=RLOC_00006772;geneIDs=comp157324_c1_seq1.path1;transcripts=comp157324_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28307963	28308281	.	+	.	ID=comp157324_c1_seq1.mrna1;geneID=comp157324_c1_seq1.path1;Name=comp157324_c1_seq1;Dir=indeterminatecoverage=99.7;identity=98.4;matches=314;mismatches=2;indels=3;unknowns=0;Target=comp157324_c1_seq1 317 2 .;CDS_Target=comp157324_c1_seq1 278 129 .;locus=RLOC_00006772
Chr1	stalkie_big_nohaplotig	exon	28307963	28308281	98	+	.	Parent=comp157324_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28308090	28308242	.	+	0	Parent=comp157324_c1_seq1.mrna1
Chr1	gffcl	locus	28328250	28381193	.	-	.	ID=RLOC_00006773;geneIDs=comp138319_c0_seq1.path1;transcripts=comp138319_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28328250	28381193	.	-	.	ID=comp138319_c0_seq1.mrna1;geneID=comp138319_c0_seq1.path1;Name=comp138319_c0_seq1;Dir=antisensecoverage=66.5;identity=64.0;matches=301;mismatches=19;indels=150;unknowns=0;Target=comp138319_c0_seq1 546 553 .;locus=RLOC_00006773
Chr1	stalkie_big_nohaplotig	exon	28328250	28328340	94	-	.	Parent=comp138319_c0_seq1.mrna1;Target=comp138319_c0_seq1 32 122 -
Chr1	stalkie_big_nohaplotig	exon	28328365	28328524	64	-	.	Parent=comp138319_c0_seq1.mrna1;Target=comp138319_c0_seq1 219 364 -
Chr1	stalkie_big_nohaplotig	exon	28328541	28328542	100	-	.	Parent=comp138319_c0_seq1.mrna1;Target=comp138319_c0_seq1 392 393 -
Chr1	stalkie_big_nohaplotig	exon	28330435	28330440	100	-	.	Parent=comp138319_c0_seq1.mrna1;Target=comp138319_c0_seq1 394 399 -
Chr1	stalkie_big_nohaplotig	exon	28331250	28331259	100	-	.	Parent=comp138319_c0_seq1.mrna1;Target=comp138319_c0_seq1 400 409 -
Chr1	stalkie_big_nohaplotig	exon	28337687	28337690	100	-	.	Parent=comp138319_c0_seq1.mrna1;Target=comp138319_c0_seq1 415 418 -
Chr1	stalkie_big_nohaplotig	exon	28351504	28351513	100	-	.	Parent=comp138319_c0_seq1.mrna1;Target=comp138319_c0_seq1 419 428 -
Chr1	stalkie_big_nohaplotig	exon	28358188	28358189	100	-	.	Parent=comp138319_c0_seq1.mrna1;Target=comp138319_c0_seq1 432 433 -
Chr1	stalkie_big_nohaplotig	exon	28372238	28372371	23	-	.	Parent=comp138319_c0_seq1.mrna1;Target=comp138319_c0_seq1 434 465 -
Chr1	stalkie_big_nohaplotig	exon	28372754	28372766	100	-	.	Parent=comp138319_c0_seq1.mrna1;Target=comp138319_c0_seq1 466 478 -
Chr1	stalkie_big_nohaplotig	exon	28372781	28372789	100	-	.	Parent=comp138319_c0_seq1.mrna1;Target=comp138319_c0_seq1 504 512 -
Chr1	stalkie_big_nohaplotig	exon	28381184	28381193	100	-	.	Parent=comp138319_c0_seq1.mrna1;Target=comp138319_c0_seq1 546 555 -
Chr1	stalkie_big_nohaplotig	CDS	28381184	28381191	.	-	0	Parent=comp138319_c0_seq1.mrna1
Chr1	gffcl	locus	28343963	28346825	.	-	.	ID=RLOC_00006774;geneIDs=ORF333.path1,ORF1477.path1,comp161707_c2_seq1.path1;transcripts=ORF333.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28344108	28346470	.	-	.	ID=ORF333.mrna1;geneID=ORF333.path1;Name=ORF333;Dir=sensecoverage=100.0;identity=98.3;matches=1970;mismatches=34;indels=0;unknowns=0;locus=RLOC_00006774
Chr1	stalkie_big_nohaplotig	exon	28344108	28344544	99	-	.	Parent=ORF333.mrna1;Target=ORF333 1568 2004 +
Chr1	stalkie_big_nohaplotig	exon	28344628	28345773	98	-	.	Parent=ORF333.mrna1;Target=ORF333 422 1567 +
Chr1	stalkie_big_nohaplotig	exon	28346050	28346470	96	-	.	Parent=ORF333.mrna1;Target=ORF333 1 421 +
Chr1	stalkie_big_nohaplotig	CDS	28344108	28344544	.	-	2	Parent=ORF333.mrna1;Target=ORF333 1568 2004 +
Chr1	stalkie_big_nohaplotig	CDS	28344628	28345773	.	-	2	Parent=ORF333.mrna1;Target=ORF333 422 1567 +
Chr1	stalkie_big_nohaplotig	CDS	28346050	28346470	.	-	0	Parent=ORF333.mrna1;Target=ORF333 1 421 +
Chr1	gffcl	locus	28358701	28358800	.	-	.	ID=RLOC_00006775;geneIDs=comp155977_c1_seq1.path2;transcripts=comp155977_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	28358701	28358800	.	-	.	ID=comp155977_c1_seq1.mrna2;geneID=comp155977_c1_seq1.path2;Name=comp155977_c1_seq1;Dir=indeterminatecoverage=7.9;identity=93.0;matches=93;mismatches=1;indels=6;unknowns=0;Target=comp155977_c1_seq1 1192 1099 .;locus=RLOC_00006775
Chr1	stalkie_big_nohaplotig	exon	28358701	28358800	93	-	.	Parent=comp155977_c1_seq1.mrna2
Chr1	gffcl	locus	28397022	28409518	.	-	.	ID=RLOC_00006776;geneIDs=FBgn0000451.1.path1;transcripts=FBgn0000451.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28397022	28409518	.	-	.	ID=FBgn0000451.1.mrna1;geneID=FBgn0000451.1.path1;Name=FBgn0000451.1;Dir=sensecoverage=99.9;identity=99.8;matches=1146;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006776
Chr1	stalkie_big_nohaplotig	exon	28397022	28397168	100	-	.	Parent=FBgn0000451.1.mrna1;Target=FBgn0000451.1 1003 1149 +
Chr1	stalkie_big_nohaplotig	exon	28398755	28399463	100	-	.	Parent=FBgn0000451.1.mrna1;Target=FBgn0000451.1 294 1002 +
Chr1	stalkie_big_nohaplotig	exon	28399576	28399798	100	-	.	Parent=FBgn0000451.1.mrna1;Target=FBgn0000451.1 71 293 +
Chr1	stalkie_big_nohaplotig	exon	28409450	28409518	97	-	.	Parent=FBgn0000451.1.mrna1;Target=FBgn0000451.1 2 70 +
Chr1	stalkie_big_nohaplotig	CDS	28397022	28397168	.	-	0	Parent=FBgn0000451.1.mrna1;Target=FBgn0000451.1 1003 1149 +
Chr1	stalkie_big_nohaplotig	CDS	28398755	28399463	.	-	1	Parent=FBgn0000451.1.mrna1;Target=FBgn0000451.1 294 1002 +
Chr1	stalkie_big_nohaplotig	CDS	28399576	28399798	.	-	2	Parent=FBgn0000451.1.mrna1;Target=FBgn0000451.1 71 293 +
Chr1	stalkie_big_nohaplotig	CDS	28409450	28409516	.	-	0	Parent=FBgn0000451.1.mrna1;Target=FBgn0000451.1 4 70 +
Chr1	gffcl	locus	28409603	28413512	.	-	.	ID=RLOC_00006778;geneIDs=comp136810_c0_seq1.path1;transcripts=comp136810_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28409603	28413512	.	-	.	ID=comp136810_c0_seq1.mrna1;geneID=comp136810_c0_seq1.path1;Name=comp136810_c0_seq1;Dir=sensecoverage=100.0;identity=98.4;matches=722;mismatches=6;indels=6;unknowns=0;locus=RLOC_00006778
Chr1	stalkie_big_nohaplotig	exon	28409603	28410274	98	-	.	Parent=comp136810_c0_seq1.mrna1;Target=comp136810_c0_seq1 57 734 +
Chr1	stalkie_big_nohaplotig	exon	28413457	28413512	100	-	.	Parent=comp136810_c0_seq1.mrna1;Target=comp136810_c0_seq1 1 56 +
Chr1	stalkie_big_nohaplotig	CDS	28409604	28410274	.	-	2	Parent=comp136810_c0_seq1.mrna1;Target=comp136810_c0_seq1 57 733 +
Chr1	stalkie_big_nohaplotig	CDS	28413457	28413511	.	-	0	Parent=comp136810_c0_seq1.mrna1;Target=comp136810_c0_seq1 2 56 +
Chr1	gffcl	locus	28466959	28467318	.	-	.	ID=RLOC_00006779;geneIDs=comp153745_c0_seq1.path1;transcripts=comp153745_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28466959	28467318	.	-	.	ID=comp153745_c0_seq1.mrna1;geneID=comp153745_c0_seq1.path1;Name=comp153745_c0_seq1;Dir=indeterminatecoverage=84.9;identity=89.0;matches=324;mismatches=33;indels=7;unknowns=0;Target=comp153745_c0_seq1 425 65 .;CDS_Target=comp153745_c0_seq1 262 242 .;locus=RLOC_00006779
Chr1	stalkie_big_nohaplotig	exon	28466959	28467318	89	-	.	Parent=comp153745_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28467119	28467140	.	-	0	Parent=comp153745_c0_seq1.mrna1
Chr1	gffcl	locus	28468187	28470434	.	+	.	ID=RLOC_00006780;geneIDs=comp163449_c0_seq1.path1;transcripts=comp163449_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28468187	28470434	.	+	.	ID=comp163449_c0_seq1.mrna1;geneID=comp163449_c0_seq1.path1;Name=comp163449_c0_seq1;Dir=sensecoverage=100.0;identity=97.4;matches=1989;mismatches=36;indels=17;unknowns=0;locus=RLOC_00006780
Chr1	stalkie_big_nohaplotig	exon	28468187	28468219	96	+	.	Parent=comp163449_c0_seq1.mrna1;Target=comp163449_c0_seq1 1 33 +
Chr1	stalkie_big_nohaplotig	exon	28468301	28468338	97	+	.	Parent=comp163449_c0_seq1.mrna1;Target=comp163449_c0_seq1 34 71 +
Chr1	stalkie_big_nohaplotig	exon	28468465	28470434	97	+	.	Parent=comp163449_c0_seq1.mrna1;Target=comp163449_c0_seq1 72 2026 +
Chr1	stalkie_big_nohaplotig	CDS	28468187	28468219	.	+	0	Parent=comp163449_c0_seq1.mrna1;Target=comp163449_c0_seq1 1 33 +
Chr1	stalkie_big_nohaplotig	CDS	28468301	28468338	.	+	0	Parent=comp163449_c0_seq1.mrna1;Target=comp163449_c0_seq1 34 71 +
Chr1	stalkie_big_nohaplotig	CDS	28468465	28468936	.	+	1	Parent=comp163449_c0_seq1.mrna1;Target=comp163449_c0_seq1 72 543 +
Chr1	gffcl	locus	28471594	28472757	.	+	.	ID=RLOC_00006781;geneIDs=comp162739_c0_seq1.path1;transcripts=comp162739_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28471594	28472757	.	+	.	ID=comp162739_c0_seq1.mrna1;geneID=comp162739_c0_seq1.path1;Name=comp162739_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.3;matches=1107;mismatches=53;indels=27;unknowns=0;Target=comp162739_c0_seq1 1183 1 .;CDS_Target=comp162739_c0_seq1 276 226 .;locus=RLOC_00006781
Chr1	stalkie_big_nohaplotig	exon	28471594	28472757	93	+	.	Parent=comp162739_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28471821	28471866	.	+	0	Parent=comp162739_c0_seq1.mrna1
Chr1	gffcl	locus	28473955	28474026	.	+	.	ID=RLOC_00006782;geneIDs=FBgn0261872.path2;transcripts=FBgn0261872.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	28473955	28474026	.	+	.	ID=FBgn0261872.mrna2;geneID=FBgn0261872.path2;Name=FBgn0261872;Dir=indeterminatecoverage=7.1;identity=100.0;matches=72;mismatches=0;indels=0;unknowns=0;Target=FBgn0261872 1020 949 .;locus=RLOC_00006782
Chr1	stalkie_big_nohaplotig	exon	28473955	28474026	100	+	.	Parent=FBgn0261872.mrna2
Chr1	stalkie_big_nohaplotig	CDS	28473955	28474026	.	+	0	Parent=FBgn0261872.mrna2
Chr1	gffcl	locus	28474627	28474901	.	-	.	ID=RLOC_00006783;geneIDs=comp137113_c0_seq1.path1;transcripts=comp137113_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28474627	28474901	.	-	.	ID=comp137113_c0_seq1.mrna1;geneID=comp137113_c0_seq1.path1;Name=comp137113_c0_seq1;Dir=indeterminatecoverage=99.3;identity=95.7;matches=265;mismatches=2;indels=10;unknowns=0;Target=comp137113_c0_seq1 270 2 .;CDS_Target=comp137113_c0_seq1 19 2 .;locus=RLOC_00006783
Chr1	stalkie_big_nohaplotig	exon	28474627	28474901	95	-	.	Parent=comp137113_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28474876	28474901	.	-	0	Parent=comp137113_c0_seq1.mrna1
Chr1	gffcl	locus	28476960	28478603	.	+	.	ID=RLOC_00006784;geneIDs=FBgn0036040.2.path2;transcripts=FBgn0036040.2.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	28476960	28478603	.	+	.	ID=FBgn0036040.2.mrna2;geneID=FBgn0036040.2.path2;Name=FBgn0036040.2;Dir=indeterminatecoverage=97.5;identity=97.9;matches=1481;mismatches=32;indels=0;unknowns=0;locus=RLOC_00006784
Chr1	stalkie_big_nohaplotig	exon	28476960	28477084	99	+	.	Parent=FBgn0036040.2.mrna2;Target=FBgn0036040.2 163 39 .
Chr1	stalkie_big_nohaplotig	exon	28477154	28477533	99	+	.	Parent=FBgn0036040.2.mrna2;Target=FBgn0036040.2 543 164 .
Chr1	stalkie_big_nohaplotig	exon	28477596	28478603	97	+	.	Parent=FBgn0036040.2.mrna2;Target=FBgn0036040.2 1551 544 .
Chr1	stalkie_big_nohaplotig	CDS	28476961	28477084	.	+	0	Parent=FBgn0036040.2.mrna2;Target=FBgn0036040.2 163 40 .
Chr1	stalkie_big_nohaplotig	CDS	28477154	28477533	.	+	2	Parent=FBgn0036040.2.mrna2;Target=FBgn0036040.2 543 164 .
Chr1	stalkie_big_nohaplotig	CDS	28477596	28478603	.	+	0	Parent=FBgn0036040.2.mrna2;Target=FBgn0036040.2 1551 544 .
Chr1	gffcl	locus	28486677	28487871	.	+	.	ID=RLOC_00006785;geneIDs=FBgn0034655.2.path1;transcripts=FBgn0034655.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28486677	28487871	.	+	.	ID=FBgn0034655.2.mrna1;geneID=FBgn0034655.2.path1;Name=FBgn0034655.2;Dir=sensecoverage=100.0;identity=98.6;matches=1029;mismatches=15;indels=0;unknowns=0;locus=RLOC_00006785
Chr1	stalkie_big_nohaplotig	exon	28486677	28486883	98	+	.	Parent=FBgn0034655.2.mrna1;Target=FBgn0034655.2 1 207 +
Chr1	stalkie_big_nohaplotig	exon	28486950	28487528	98	+	.	Parent=FBgn0034655.2.mrna1;Target=FBgn0034655.2 208 786 +
Chr1	stalkie_big_nohaplotig	exon	28487614	28487871	98	+	.	Parent=FBgn0034655.2.mrna1;Target=FBgn0034655.2 787 1044 +
Chr1	stalkie_big_nohaplotig	CDS	28486677	28486883	.	+	0	Parent=FBgn0034655.2.mrna1;Target=FBgn0034655.2 1 207 +
Chr1	stalkie_big_nohaplotig	CDS	28486950	28487528	.	+	0	Parent=FBgn0034655.2.mrna1;Target=FBgn0034655.2 208 786 +
Chr1	stalkie_big_nohaplotig	CDS	28487614	28487871	.	+	0	Parent=FBgn0034655.2.mrna1;Target=FBgn0034655.2 787 1044 +
Chr1	gffcl	locus	28492221	28492804	.	-	.	ID=RLOC_00006786;geneIDs=comp134697_c0_seq1.path1;transcripts=comp134697_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28492221	28492804	.	-	.	ID=comp134697_c0_seq1.mrna1;geneID=comp134697_c0_seq1.path1;Name=comp134697_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.3;matches=580;mismatches=4;indels=0;unknowns=0;Target=comp134697_c0_seq1 585 2 .;CDS_Target=comp134697_c0_seq1 507 331 .;locus=RLOC_00006786
Chr1	stalkie_big_nohaplotig	exon	28492221	28492804	99	-	.	Parent=comp134697_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28492299	28492475	.	-	0	Parent=comp134697_c0_seq1.mrna1
Chr1	gffcl	locus	28575066	28580383	.	+	.	ID=RLOC_00006787;geneIDs=comp163191_c1_seq1.path1;transcripts=comp163191_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28575066	28580383	.	+	.	ID=comp163191_c1_seq1.mrna1;geneID=comp163191_c1_seq1.path1;Name=comp163191_c1_seq1;Dir=sensecoverage=98.9;identity=98.7;matches=1559;mismatches=20;indels=0;unknowns=0;locus=RLOC_00006787
Chr1	stalkie_big_nohaplotig	exon	28575066	28575394	99	+	.	Parent=comp163191_c1_seq1.mrna1;Target=comp163191_c1_seq1 17 345 +
Chr1	stalkie_big_nohaplotig	exon	28576246	28576662	96	+	.	Parent=comp163191_c1_seq1.mrna1;Target=comp163191_c1_seq1 346 762 +
Chr1	stalkie_big_nohaplotig	exon	28578123	28578262	100	+	.	Parent=comp163191_c1_seq1.mrna1;Target=comp163191_c1_seq1 763 902 +
Chr1	stalkie_big_nohaplotig	exon	28578328	28578577	100	+	.	Parent=comp163191_c1_seq1.mrna1;Target=comp163191_c1_seq1 903 1152 +
Chr1	stalkie_big_nohaplotig	exon	28579941	28580383	99	+	.	Parent=comp163191_c1_seq1.mrna1;Target=comp163191_c1_seq1 1153 1595 +
Chr1	stalkie_big_nohaplotig	CDS	28578197	28578262	.	+	0	Parent=comp163191_c1_seq1.mrna1;Target=comp163191_c1_seq1 837 902 +
Chr1	stalkie_big_nohaplotig	CDS	28578328	28578558	.	+	0	Parent=comp163191_c1_seq1.mrna1;Target=comp163191_c1_seq1 903 1133 +
Chr1	gffcl	locus	28641608	28641749	.	-	.	ID=RLOC_00006788;geneIDs=FBgn0052057.1.path1;transcripts=FBgn0052057.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28641608	28641749	.	-	.	ID=FBgn0052057.1.mrna1;geneID=FBgn0052057.1.path1;Name=FBgn0052057.1;Dir=indeterminatecoverage=10.6;identity=99.3;matches=141;mismatches=1;indels=0;unknowns=0;Target=FBgn0052057.1 142 1 .;locus=RLOC_00006788
Chr1	stalkie_big_nohaplotig	exon	28641608	28641749	99	-	.	Parent=FBgn0052057.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28641608	28641749	.	-	0	Parent=FBgn0052057.1.mrna1
Chr1	gffcl	locus	28655299	28655669	.	+	.	ID=RLOC_00006789;geneIDs=comp116059_c0_seq1.path1;transcripts=comp116059_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28655299	28655669	.	+	.	ID=comp116059_c0_seq1.mrna1;geneID=comp116059_c0_seq1.path1;Name=comp116059_c0_seq1;Dir=indeterminatecoverage=95.1;identity=98.4;matches=365;mismatches=6;indels=0;unknowns=0;Target=comp116059_c0_seq1 390 20 .;CDS_Target=comp116059_c0_seq1 155 21 .;locus=RLOC_00006789
Chr1	stalkie_big_nohaplotig	exon	28655299	28655669	98	+	.	Parent=comp116059_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28655300	28655434	.	+	0	Parent=comp116059_c0_seq1.mrna1
Chr1	gffcl	locus	28722782	28760184	.	+	.	ID=RLOC_00006790;geneIDs=FBgn0052057.1.path2;transcripts=FBgn0052057.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	28722782	28760184	.	+	.	ID=FBgn0052057.1.mrna2;geneID=FBgn0052057.1.path2;Name=FBgn0052057.1;Dir=sensecoverage=89.4;identity=99.2;matches=1184;mismatches=9;indels=0;unknowns=0;locus=RLOC_00006790
Chr1	stalkie_big_nohaplotig	exon	28722782	28722993	100	+	.	Parent=FBgn0052057.1.mrna2;Target=FBgn0052057.1 143 354 +
Chr1	stalkie_big_nohaplotig	exon	28737102	28737312	100	+	.	Parent=FBgn0052057.1.mrna2;Target=FBgn0052057.1 355 565 +
Chr1	stalkie_big_nohaplotig	exon	28740342	28740479	96	+	.	Parent=FBgn0052057.1.mrna2;Target=FBgn0052057.1 566 703 +
Chr1	stalkie_big_nohaplotig	exon	28753443	28753570	100	+	.	Parent=FBgn0052057.1.mrna2;Target=FBgn0052057.1 704 831 +
Chr1	stalkie_big_nohaplotig	exon	28754943	28755111	99	+	.	Parent=FBgn0052057.1.mrna2;Target=FBgn0052057.1 832 1000 +
Chr1	stalkie_big_nohaplotig	exon	28759850	28760184	99	+	.	Parent=FBgn0052057.1.mrna2;Target=FBgn0052057.1 1001 1335 +
Chr1	stalkie_big_nohaplotig	CDS	28722782	28722993	.	+	1	Parent=FBgn0052057.1.mrna2;Target=FBgn0052057.1 143 354 +
Chr1	stalkie_big_nohaplotig	CDS	28737102	28737312	.	+	2	Parent=FBgn0052057.1.mrna2;Target=FBgn0052057.1 355 565 +
Chr1	stalkie_big_nohaplotig	CDS	28740342	28740479	.	+	1	Parent=FBgn0052057.1.mrna2;Target=FBgn0052057.1 566 703 +
Chr1	stalkie_big_nohaplotig	CDS	28753443	28753570	.	+	1	Parent=FBgn0052057.1.mrna2;Target=FBgn0052057.1 704 831 +
Chr1	stalkie_big_nohaplotig	CDS	28754943	28755111	.	+	2	Parent=FBgn0052057.1.mrna2;Target=FBgn0052057.1 832 1000 +
Chr1	stalkie_big_nohaplotig	CDS	28759850	28760184	.	+	1	Parent=FBgn0052057.1.mrna2;Target=FBgn0052057.1 1001 1335 +
Chr1	gffcl	locus	28774672	28776283	.	+	.	ID=RLOC_00006791;geneIDs=comp141833_c0_seq1.path1;transcripts=comp141833_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28774672	28776283	.	+	.	ID=comp141833_c0_seq1.mrna1;geneID=comp141833_c0_seq1.path1;Name=comp141833_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=529;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006791
Chr1	stalkie_big_nohaplotig	exon	28774672	28774907	100	+	.	Parent=comp141833_c0_seq1.mrna1;Target=comp141833_c0_seq1 294 529 -
Chr1	stalkie_big_nohaplotig	exon	28775802	28776010	100	+	.	Parent=comp141833_c0_seq1.mrna1;Target=comp141833_c0_seq1 85 293 -
Chr1	stalkie_big_nohaplotig	exon	28776200	28776283	100	+	.	Parent=comp141833_c0_seq1.mrna1;Target=comp141833_c0_seq1 1 84 -
Chr1	stalkie_big_nohaplotig	CDS	28774674	28774907	.	+	0	Parent=comp141833_c0_seq1.mrna1;Target=comp141833_c0_seq1 294 527 .
Chr1	stalkie_big_nohaplotig	CDS	28775802	28775966	.	+	0	Parent=comp141833_c0_seq1.mrna1;Target=comp141833_c0_seq1 129 293 .
Chr1	gffcl	locus	28787814	28792808	.	+	.	ID=RLOC_00006792;geneIDs=FBgn0052054.3.path1;transcripts=FBgn0052054.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28787814	28792808	.	+	.	ID=FBgn0052054.3.mrna1;geneID=FBgn0052054.3.path1;Name=FBgn0052054.3;Dir=sensecoverage=98.3;identity=95.1;matches=1394;mismatches=72;indels=0;unknowns=0;locus=RLOC_00006792
Chr1	stalkie_big_nohaplotig	exon	28787814	28788015	98	+	.	Parent=FBgn0052054.3.mrna1;Target=FBgn0052054.3 1 202 +
Chr1	stalkie_big_nohaplotig	exon	28791477	28791628	95	+	.	Parent=FBgn0052054.3.mrna1;Target=FBgn0052054.3 203 354 +
Chr1	stalkie_big_nohaplotig	exon	28791697	28792808	94	+	.	Parent=FBgn0052054.3.mrna1;Target=FBgn0052054.3 355 1466 +
Chr1	stalkie_big_nohaplotig	CDS	28787814	28788015	.	+	0	Parent=FBgn0052054.3.mrna1;Target=FBgn0052054.3 1 202 +
Chr1	stalkie_big_nohaplotig	CDS	28791477	28791628	.	+	2	Parent=FBgn0052054.3.mrna1;Target=FBgn0052054.3 203 354 +
Chr1	stalkie_big_nohaplotig	CDS	28791697	28792806	.	+	0	Parent=FBgn0052054.3.mrna1;Target=FBgn0052054.3 355 1464 +
Chr1	gffcl	locus	28813595	28813806	.	+	.	ID=RLOC_00006793;geneIDs=comp140856_c0_seq1.path1;transcripts=comp140856_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28813595	28813806	.	+	.	ID=comp140856_c0_seq1.mrna1;geneID=comp140856_c0_seq1.path1;Name=comp140856_c0_seq1;Dir=indeterminatecoverage=100.0;identity=87.7;matches=207;mismatches=3;indels=26;unknowns=0;Target=comp140856_c0_seq1 234 1 .;CDS_Target=comp140856_c0_seq1 58 2 .;locus=RLOC_00006793
Chr1	stalkie_big_nohaplotig	exon	28813595	28813806	87	+	.	Parent=comp140856_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28813596	28813653	.	+	0	Parent=comp140856_c0_seq1.mrna1
Chr1	gffcl	locus	28813992	28814334	.	+	.	ID=RLOC_00006794;geneIDs=comp143131_c0_seq1.path1;transcripts=comp143131_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28813992	28814334	.	+	.	ID=comp143131_c0_seq1.mrna1;geneID=comp143131_c0_seq1.path1;Name=comp143131_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=342;mismatches=1;indels=0;unknowns=0;Target=comp143131_c0_seq1 343 1 .;CDS_Target=comp143131_c0_seq1 229 2 .;locus=RLOC_00006794
Chr1	stalkie_big_nohaplotig	exon	28813992	28814334	99	+	.	Parent=comp143131_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28813993	28814220	.	+	0	Parent=comp143131_c0_seq1.mrna1
Chr1	gffcl	locus	28827373	28833145	.	+	.	ID=RLOC_00006796;geneIDs=FBgn0052054.2.path1;transcripts=FBgn0052054.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28827373	28833145	.	+	.	ID=FBgn0052054.2.mrna1;geneID=FBgn0052054.2.path1;Name=FBgn0052054.2;Dir=sensecoverage=100.0;identity=99.5;matches=1486;mismatches=8;indels=0;unknowns=0;locus=RLOC_00006796
Chr1	stalkie_big_nohaplotig	exon	28827373	28827577	99	+	.	Parent=FBgn0052054.2.mrna1;Target=FBgn0052054.2 1 205 +
Chr1	stalkie_big_nohaplotig	exon	28831794	28831945	98	+	.	Parent=FBgn0052054.2.mrna1;Target=FBgn0052054.2 206 357 +
Chr1	stalkie_big_nohaplotig	exon	28832009	28833145	99	+	.	Parent=FBgn0052054.2.mrna1;Target=FBgn0052054.2 358 1494 +
Chr1	stalkie_big_nohaplotig	CDS	28827373	28827577	.	+	0	Parent=FBgn0052054.2.mrna1;Target=FBgn0052054.2 1 205 +
Chr1	stalkie_big_nohaplotig	CDS	28831794	28831945	.	+	2	Parent=FBgn0052054.2.mrna1;Target=FBgn0052054.2 206 357 +
Chr1	stalkie_big_nohaplotig	CDS	28832009	28833145	.	+	0	Parent=FBgn0052054.2.mrna1;Target=FBgn0052054.2 358 1494 +
Chr1	gffcl	locus	28828606	28828973	.	-	.	ID=RLOC_00006797;geneIDs=Dv_FBgn0209645.1.path1;transcripts=Dv_FBgn0209645.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28828606	28828973	.	-	.	ID=Dv_FBgn0209645.1.mrna1;geneID=Dv_FBgn0209645.1.path1;Name=Dv_FBgn0209645.1;Dir=indeterminatecoverage=99.7;identity=98.9;matches=364;mismatches=4;indels=0;unknowns=0;Target=Dv_FBgn0209645.1 368 1 .;CDS_Target=Dv_FBgn0209645.1 366 1 .;locus=RLOC_00006797
Chr1	stalkie_big_nohaplotig	exon	28828606	28828973	98	-	.	Parent=Dv_FBgn0209645.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28828608	28828973	.	-	0	Parent=Dv_FBgn0209645.1.mrna1
Chr1	gffcl	locus	28837976	28839741	.	+	.	ID=RLOC_00006798;geneIDs=FBgn0262007.1.path1;transcripts=FBgn0262007.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28837976	28839741	.	+	.	ID=FBgn0262007.1.mrna1;geneID=FBgn0262007.1.path1;Name=FBgn0262007.1;Dir=sensecoverage=100.0;identity=99.1;matches=1442;mismatches=13;indels=0;unknowns=0;locus=RLOC_00006798
Chr1	stalkie_big_nohaplotig	exon	28837976	28838111	100	+	.	Parent=FBgn0262007.1.mrna1;Target=FBgn0262007.1 1 136 +
Chr1	stalkie_big_nohaplotig	exon	28838365	28838534	100	+	.	Parent=FBgn0262007.1.mrna1;Target=FBgn0262007.1 137 306 +
Chr1	stalkie_big_nohaplotig	exon	28838593	28839741	98	+	.	Parent=FBgn0262007.1.mrna1;Target=FBgn0262007.1 307 1455 +
Chr1	stalkie_big_nohaplotig	CDS	28837976	28838111	.	+	0	Parent=FBgn0262007.1.mrna1;Target=FBgn0262007.1 1 136 +
Chr1	stalkie_big_nohaplotig	CDS	28838365	28838534	.	+	2	Parent=FBgn0262007.1.mrna1;Target=FBgn0262007.1 137 306 +
Chr1	stalkie_big_nohaplotig	CDS	28838593	28839741	.	+	0	Parent=FBgn0262007.1.mrna1;Target=FBgn0262007.1 307 1455 +
Chr1	gffcl	locus	28844468	28848314	.	+	.	ID=RLOC_00006799;geneIDs=FBgn0036066.1.path1;transcripts=FBgn0036066.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28844468	28848314	.	+	.	ID=FBgn0036066.1.mrna1;geneID=FBgn0036066.1.path1;Name=FBgn0036066.1;Dir=sensecoverage=100.0;identity=98.5;matches=1410;mismatches=21;indels=0;unknowns=0;locus=RLOC_00006799
Chr1	stalkie_big_nohaplotig	exon	28844468	28844567	100	+	.	Parent=FBgn0036066.1.mrna1;Target=FBgn0036066.1 1 100 +
Chr1	stalkie_big_nohaplotig	exon	28844640	28844821	100	+	.	Parent=FBgn0036066.1.mrna1;Target=FBgn0036066.1 101 282 +
Chr1	stalkie_big_nohaplotig	exon	28847166	28848314	98	+	.	Parent=FBgn0036066.1.mrna1;Target=FBgn0036066.1 283 1431 +
Chr1	stalkie_big_nohaplotig	CDS	28844468	28844567	.	+	0	Parent=FBgn0036066.1.mrna1;Target=FBgn0036066.1 1 100 +
Chr1	stalkie_big_nohaplotig	CDS	28844640	28844821	.	+	2	Parent=FBgn0036066.1.mrna1;Target=FBgn0036066.1 101 282 +
Chr1	stalkie_big_nohaplotig	CDS	28847166	28848314	.	+	0	Parent=FBgn0036066.1.mrna1;Target=FBgn0036066.1 283 1431 +
Chr1	gffcl	locus	28922457	28922789	.	-	.	ID=RLOC_00006800;geneIDs=comp160093_c0_seq1.path2;transcripts=comp160093_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	28922457	28922789	.	-	.	ID=comp160093_c0_seq1.mrna2;geneID=comp160093_c0_seq1.path2;Name=comp160093_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=328;mismatches=5;indels=0;unknowns=0;Target=comp160093_c0_seq1 333 1 .;CDS_Target=comp160093_c0_seq1 97 2 .;locus=RLOC_00006800
Chr1	stalkie_big_nohaplotig	exon	28922457	28922789	98	-	.	Parent=comp160093_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	28922693	28922788	.	-	0	Parent=comp160093_c0_seq1.mrna2
Chr1	gffcl	locus	28923242	28924095	.	-	.	ID=RLOC_00006801;geneIDs=comp161528_c0_seq1.path1;transcripts=comp161528_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28923242	28924095	.	-	.	ID=comp161528_c0_seq1.mrna1;geneID=comp161528_c0_seq1.path1;Name=comp161528_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=849;mismatches=3;indels=17;unknowns=0;Target=comp161528_c0_seq1 867 1 .;CDS_Target=comp161528_c0_seq1 676 581 .;locus=RLOC_00006801
Chr1	stalkie_big_nohaplotig	exon	28923242	28924095	97	-	.	Parent=comp161528_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28923433	28923528	.	-	0	Parent=comp161528_c0_seq1.mrna1
Chr1	gffcl	locus	28925402	28925678	.	+	.	ID=RLOC_00006802;geneIDs=comp116854_c0_seq1.path1;transcripts=comp116854_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28925402	28925678	.	+	.	ID=comp116854_c0_seq1.mrna1;geneID=comp116854_c0_seq1.path1;Name=comp116854_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=277;mismatches=0;indels=1;unknowns=0;Target=comp116854_c0_seq1 278 1 .;CDS_Target=comp116854_c0_seq1 64 2 .;locus=RLOC_00006802
Chr1	stalkie_big_nohaplotig	exon	28925402	28925678	99	+	.	Parent=comp116854_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	28925403	28925465	.	+	0	Parent=comp116854_c0_seq1.mrna1
Chr1	gffcl	locus	28962294	28963717	.	-	.	ID=RLOC_00006803;geneIDs=Dp_FBgn0074031.1.path1;transcripts=Dp_FBgn0074031.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	28962294	28963717	.	-	.	ID=Dp_FBgn0074031.1.mrna1;geneID=Dp_FBgn0074031.1.path1;Name=Dp_FBgn0074031.1;Dir=sensecoverage=100.0;identity=99.3;matches=1353;mismatches=9;indels=0;unknowns=0;locus=RLOC_00006803
Chr1	stalkie_big_nohaplotig	exon	28962294	28963001	99	-	.	Parent=Dp_FBgn0074031.1.mrna1;Target=Dp_FBgn0074031.1 655 1362 +
Chr1	stalkie_big_nohaplotig	exon	28963064	28963717	99	-	.	Parent=Dp_FBgn0074031.1.mrna1;Target=Dp_FBgn0074031.1 1 654 +
Chr1	stalkie_big_nohaplotig	CDS	28962294	28963001	.	-	0	Parent=Dp_FBgn0074031.1.mrna1;Target=Dp_FBgn0074031.1 655 1362 +
Chr1	stalkie_big_nohaplotig	CDS	28963064	28963717	.	-	0	Parent=Dp_FBgn0074031.1.mrna1;Target=Dp_FBgn0074031.1 1 654 +
Chr1	gffcl	locus	29005248	29005395	.	+	.	ID=RLOC_00006804;geneIDs=comp157934_c0_seq1.path2;transcripts=comp157934_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	29005248	29005395	.	+	.	ID=comp157934_c0_seq1.mrna2;geneID=comp157934_c0_seq1.path2;Name=comp157934_c0_seq1;Dir=indeterminatecoverage=7.2;identity=99.3;matches=147;mismatches=1;indels=0;unknowns=0;Target=comp157934_c0_seq1 2048 1901 .;locus=RLOC_00006804
Chr1	stalkie_big_nohaplotig	exon	29005248	29005395	99	+	.	Parent=comp157934_c0_seq1.mrna2
Chr1	gffcl	locus	29030499	29036323	.	+	.	ID=RLOC_00006805;geneIDs=FBgn0027567.1.path1;transcripts=FBgn0027567.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29030499	29036323	.	+	.	ID=FBgn0027567.1.mrna1;geneID=FBgn0027567.1.path1;Name=FBgn0027567.1;Dir=sensecoverage=99.3;identity=100.0;matches=2219;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006805
Chr1	stalkie_big_nohaplotig	exon	29030499	29030779	100	+	.	Parent=FBgn0027567.1.mrna1;Target=FBgn0027567.1 14 294 +
Chr1	stalkie_big_nohaplotig	exon	29032639	29032686	100	+	.	Parent=FBgn0027567.1.mrna1;Target=FBgn0027567.1 295 342 +
Chr1	stalkie_big_nohaplotig	exon	29033532	29033905	100	+	.	Parent=FBgn0027567.1.mrna1;Target=FBgn0027567.1 343 716 +
Chr1	stalkie_big_nohaplotig	exon	29034679	29035336	100	+	.	Parent=FBgn0027567.1.mrna1;Target=FBgn0027567.1 717 1374 +
Chr1	stalkie_big_nohaplotig	exon	29035394	29035717	100	+	.	Parent=FBgn0027567.1.mrna1;Target=FBgn0027567.1 1375 1698 +
Chr1	stalkie_big_nohaplotig	exon	29035789	29036323	99	+	.	Parent=FBgn0027567.1.mrna1;Target=FBgn0027567.1 1699 2233 +
Chr1	stalkie_big_nohaplotig	CDS	29030501	29030779	.	+	0	Parent=FBgn0027567.1.mrna1;Target=FBgn0027567.1 16 294 +
Chr1	stalkie_big_nohaplotig	CDS	29032639	29032686	.	+	0	Parent=FBgn0027567.1.mrna1;Target=FBgn0027567.1 295 342 +
Chr1	stalkie_big_nohaplotig	CDS	29033532	29033905	.	+	0	Parent=FBgn0027567.1.mrna1;Target=FBgn0027567.1 343 716 +
Chr1	stalkie_big_nohaplotig	CDS	29034679	29035336	.	+	1	Parent=FBgn0027567.1.mrna1;Target=FBgn0027567.1 717 1374 +
Chr1	stalkie_big_nohaplotig	CDS	29035394	29035717	.	+	0	Parent=FBgn0027567.1.mrna1;Target=FBgn0027567.1 1375 1698 +
Chr1	stalkie_big_nohaplotig	CDS	29035789	29036322	.	+	0	Parent=FBgn0027567.1.mrna1;Target=FBgn0027567.1 1699 2232 +
Chr1	gffcl	locus	29039389	29040249	.	-	.	ID=RLOC_00006806;geneIDs=comp151934_c0_seq1.path1;transcripts=comp151934_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29039389	29040249	.	-	.	ID=comp151934_c0_seq1.mrna1;geneID=comp151934_c0_seq1.path1;Name=comp151934_c0_seq1;Dir=sensecoverage=97.0;identity=95.8;matches=758;mismatches=15;indels=18;unknowns=0;locus=RLOC_00006806
Chr1	stalkie_big_nohaplotig	exon	29039389	29039642	99	-	.	Parent=comp151934_c0_seq1.mrna1;Target=comp151934_c0_seq1 539 792 +
Chr1	stalkie_big_nohaplotig	exon	29039722	29040249	94	-	.	Parent=comp151934_c0_seq1.mrna1;Target=comp151934_c0_seq1 11 538 +
Chr1	stalkie_big_nohaplotig	CDS	29039495	29039642	.	-	1	Parent=comp151934_c0_seq1.mrna1;Target=comp151934_c0_seq1 539 686 +
Chr1	stalkie_big_nohaplotig	CDS	29039722	29039927	.	-	0	Parent=comp151934_c0_seq1.mrna1;Target=comp151934_c0_seq1 333 538 +
Chr1	gffcl	locus	29116301	29116379	.	-	.	ID=RLOC_00006807;geneIDs=FBgn0263218.1.path1;transcripts=FBgn0263218.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29116301	29116379	.	-	.	ID=FBgn0263218.1.mrna1;geneID=FBgn0263218.1.path1;Name=FBgn0263218.1;Dir=indeterminatecoverage=1.4;identity=100.0;matches=79;mismatches=0;indels=0;unknowns=0;Target=FBgn0263218.1 79 1 .;locus=RLOC_00006807
Chr1	stalkie_big_nohaplotig	exon	29116301	29116379	100	-	.	Parent=FBgn0263218.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29116301	29116379	.	-	0	Parent=FBgn0263218.1.mrna1
Chr1	gffcl	locus	29139704	29303333	.	.	.	ID=RLOC_00006808;geneIDs=FBgn0263218.1.path2,comp149814_c0_seq1.path1;transcripts=FBgn0263218.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	29139704	29302290	.	+	.	ID=FBgn0263218.1.mrna2;geneID=FBgn0263218.1.path2;Name=FBgn0263218.1;Dir=sensecoverage=98.6;identity=99.7;matches=5586;mismatches=16;indels=0;unknowns=7;locus=RLOC_00006808
Chr1	stalkie_big_nohaplotig	exon	29139704	29140036	100	+	.	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 80 412 +
Chr1	stalkie_big_nohaplotig	exon	29144141	29144302	100	+	.	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 413 574 +
Chr1	stalkie_big_nohaplotig	exon	29144914	29145060	100	+	.	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 575 721 +
Chr1	stalkie_big_nohaplotig	exon	29146222	29146339	100	+	.	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 722 839 +
Chr1	stalkie_big_nohaplotig	exon	29183635	29184083	99	+	.	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 840 1288 +
Chr1	stalkie_big_nohaplotig	exon	29188227	29188371	100	+	.	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 1289 1433 +
Chr1	stalkie_big_nohaplotig	exon	29239307	29239458	100	+	.	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 1434 1585 +
Chr1	stalkie_big_nohaplotig	exon	29248393	29248665	100	+	.	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 1586 1858 +
Chr1	stalkie_big_nohaplotig	exon	29277817	29278101	100	+	.	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 1859 2143 +
Chr1	stalkie_big_nohaplotig	exon	29289990	29290109	99	+	.	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 2144 2263 +
Chr1	stalkie_big_nohaplotig	exon	29291633	29291806	100	+	.	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 2264 2437 +
Chr1	stalkie_big_nohaplotig	exon	29292146	29292296	100	+	.	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 2438 2588 +
Chr1	stalkie_big_nohaplotig	exon	29292385	29292665	99	+	.	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 2589 2869 +
Chr1	stalkie_big_nohaplotig	exon	29292730	29293215	98	+	.	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 2870 3355 +
Chr1	stalkie_big_nohaplotig	exon	29293921	29295237	99	+	.	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 3356 4672 +
Chr1	stalkie_big_nohaplotig	exon	29295462	29295749	100	+	.	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 4673 4960 +
Chr1	stalkie_big_nohaplotig	exon	29296008	29296130	99	+	.	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 4961 5083 +
Chr1	stalkie_big_nohaplotig	exon	29298487	29298647	100	+	.	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 5084 5244 +
Chr1	stalkie_big_nohaplotig	exon	29299346	29299475	100	+	.	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 5245 5374 +
Chr1	stalkie_big_nohaplotig	exon	29301977	29302290	100	+	.	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 5375 5688 +
Chr1	stalkie_big_nohaplotig	CDS	29139704	29140036	.	+	1	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 80 412 +
Chr1	stalkie_big_nohaplotig	CDS	29144141	29144302	.	+	1	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 413 574 +
Chr1	stalkie_big_nohaplotig	CDS	29144914	29145060	.	+	1	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 575 721 +
Chr1	stalkie_big_nohaplotig	CDS	29146222	29146339	.	+	1	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 722 839 +
Chr1	stalkie_big_nohaplotig	CDS	29183635	29184083	.	+	0	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 840 1288 +
Chr1	stalkie_big_nohaplotig	CDS	29188227	29188371	.	+	1	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 1289 1433 +
Chr1	stalkie_big_nohaplotig	CDS	29239307	29239458	.	+	0	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 1434 1585 +
Chr1	stalkie_big_nohaplotig	CDS	29248393	29248665	.	+	1	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 1586 1858 +
Chr1	stalkie_big_nohaplotig	CDS	29277817	29278101	.	+	1	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 1859 2143 +
Chr1	stalkie_big_nohaplotig	CDS	29289990	29290109	.	+	1	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 2144 2263 +
Chr1	stalkie_big_nohaplotig	CDS	29291633	29291806	.	+	1	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 2264 2437 +
Chr1	stalkie_big_nohaplotig	CDS	29292146	29292296	.	+	1	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 2438 2588 +
Chr1	stalkie_big_nohaplotig	CDS	29292385	29292665	.	+	0	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 2589 2869 +
Chr1	stalkie_big_nohaplotig	CDS	29292730	29293215	.	+	1	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 2870 3355 +
Chr1	stalkie_big_nohaplotig	CDS	29293921	29295237	.	+	1	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 3356 4672 +
Chr1	stalkie_big_nohaplotig	CDS	29295462	29295749	.	+	1	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 4673 4960 +
Chr1	stalkie_big_nohaplotig	CDS	29296008	29296130	.	+	1	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 4961 5083 +
Chr1	stalkie_big_nohaplotig	CDS	29298487	29298647	.	+	1	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 5084 5244 +
Chr1	stalkie_big_nohaplotig	CDS	29299346	29299475	.	+	2	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 5245 5374 +
Chr1	stalkie_big_nohaplotig	CDS	29301977	29302290	.	+	1	Parent=FBgn0263218.1.mrna2;Target=FBgn0263218.1 5375 5688 +
Chr1	gffcl	locus	29179268	29179641	.	-	.	ID=RLOC_00006809;geneIDs=comp1067357_c0_seq1.path1;transcripts=comp1067357_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29179268	29179641	.	-	.	ID=comp1067357_c0_seq1.mrna1;geneID=comp1067357_c0_seq1.path1;Name=comp1067357_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=373;mismatches=1;indels=0;unknowns=0;Target=comp1067357_c0_seq1 374 1 .;CDS_Target=comp1067357_c0_seq1 334 185 .;locus=RLOC_00006809
Chr1	stalkie_big_nohaplotig	exon	29179268	29179641	99	-	.	Parent=comp1067357_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29179308	29179457	.	-	0	Parent=comp1067357_c0_seq1.mrna1
Chr1	gffcl	locus	29303358	29303765	.	+	.	ID=RLOC_00006810;geneIDs=comp148493_c0_seq1.path1;transcripts=comp148493_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29303358	29303765	.	+	.	ID=comp148493_c0_seq1.mrna1;geneID=comp148493_c0_seq1.path1;Name=comp148493_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=406;mismatches=2;indels=0;unknowns=0;Target=comp148493_c0_seq1 408 1 .;CDS_Target=comp148493_c0_seq1 346 2 .;locus=RLOC_00006810
Chr1	stalkie_big_nohaplotig	exon	29303358	29303765	99	+	.	Parent=comp148493_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29303359	29303703	.	+	0	Parent=comp148493_c0_seq1.mrna1
Chr1	gffcl	locus	29304884	29305540	.	+	.	ID=RLOC_00006811;geneIDs=comp162770_c0_seq1.path1;transcripts=comp162770_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29304884	29305540	.	+	.	ID=comp162770_c0_seq1.mrna1;geneID=comp162770_c0_seq1.path1;Name=comp162770_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.9;matches=630;mismatches=14;indels=13;unknowns=0;Target=comp162770_c0_seq1 644 1 .;CDS_Target=comp162770_c0_seq1 331 230 .;locus=RLOC_00006811
Chr1	stalkie_big_nohaplotig	exon	29304884	29305540	95	+	.	Parent=comp162770_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29305113	29305227	.	+	0	Parent=comp162770_c0_seq1.mrna1
Chr1	gffcl	locus	29305832	29306164	.	-	.	ID=RLOC_00006812;geneIDs=comp160093_c0_seq1.path1;transcripts=comp160093_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29305832	29306164	.	-	.	ID=comp160093_c0_seq1.mrna1;geneID=comp160093_c0_seq1.path1;Name=comp160093_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=329;mismatches=4;indels=0;unknowns=0;Target=comp160093_c0_seq1 333 1 .;CDS_Target=comp160093_c0_seq1 97 2 .;locus=RLOC_00006812
Chr1	stalkie_big_nohaplotig	exon	29305832	29306164	98	-	.	Parent=comp160093_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29306068	29306163	.	-	0	Parent=comp160093_c0_seq1.mrna1
Chr1	gffcl	locus	29308245	29308744	.	+	.	ID=RLOC_00006813;geneIDs=comp148321_c0_seq1.path1;transcripts=comp148321_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29308245	29308744	.	+	.	ID=comp148321_c0_seq1.mrna1;geneID=comp148321_c0_seq1.path1;Name=comp148321_c0_seq1;Dir=indeterminatecoverage=74.5;identity=99.8;matches=499;mismatches=1;indels=0;unknowns=0;Target=comp148321_c0_seq1 671 172 .;CDS_Target=comp148321_c0_seq1 231 172 .;locus=RLOC_00006813
Chr1	stalkie_big_nohaplotig	exon	29308245	29308744	99	+	.	Parent=comp148321_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29308245	29308304	.	+	0	Parent=comp148321_c0_seq1.mrna1
Chr1	gffcl	locus	29308747	29309023	.	+	.	ID=RLOC_00006814;geneIDs=comp116854_c0_seq1.path2;transcripts=comp116854_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	29308747	29309023	.	+	.	ID=comp116854_c0_seq1.mrna2;geneID=comp116854_c0_seq1.path2;Name=comp116854_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=277;mismatches=0;indels=1;unknowns=0;Target=comp116854_c0_seq1 278 1 .;CDS_Target=comp116854_c0_seq1 64 2 .;locus=RLOC_00006814
Chr1	stalkie_big_nohaplotig	exon	29308747	29309023	99	+	.	Parent=comp116854_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	29308748	29308810	.	+	0	Parent=comp116854_c0_seq1.mrna2
Chr1	gffcl	locus	29363544	29364535	.	+	.	ID=RLOC_00006815;geneIDs=ORF1835.path3;transcripts=ORF1835.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	29363544	29364535	.	+	.	ID=ORF1835.mrna3;geneID=ORF1835.path3;Name=ORF1835;Dir=indeterminatecoverage=100.0;identity=98.6;matches=978;mismatches=9;indels=5;unknowns=0;Target=ORF1835 987 1 .;CDS_Target=ORF1835 987 262 .;locus=RLOC_00006815
Chr1	stalkie_big_nohaplotig	exon	29363544	29364535	98	+	.	Parent=ORF1835.mrna3
Chr1	stalkie_big_nohaplotig	CDS	29363810	29364535	.	+	0	Parent=ORF1835.mrna3
Chr1	gffcl	locus	29370040	29373377	.	-	.	ID=RLOC_00006816;geneIDs=comp162504_c0_seq1.path1,comp162637_c0_seq1.path1;transcripts=comp162637_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29370040	29372310	.	-	.	ID=comp162637_c0_seq1.mrna1;geneID=comp162637_c0_seq1.path1;Name=comp162637_c0_seq1;Dir=indeterminatecoverage=97.8;identity=96.6;matches=2203;mismatches=40;indels=37;unknowns=0;Target=comp162637_c0_seq1 2252 1 .;CDS_Target=comp162637_c0_seq1 1000 854 .;locus=RLOC_00006816
Chr1	stalkie_big_nohaplotig	exon	29370040	29372310	96	-	.	Parent=comp162637_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29371316	29371460	.	-	0	Parent=comp162637_c0_seq1.mrna1
Chr1	gffcl	locus	29379034	29388734	.	-	.	ID=RLOC_00006817;geneIDs=FBgn0036059.1.path1;transcripts=FBgn0036059.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29379034	29388734	.	-	.	ID=FBgn0036059.1.mrna1;geneID=FBgn0036059.1.path1;Name=FBgn0036059.1;Dir=sensecoverage=100.0;identity=100.0;matches=1272;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006817
Chr1	stalkie_big_nohaplotig	exon	29379034	29379447	100	-	.	Parent=FBgn0036059.1.mrna1;Target=FBgn0036059.1 859 1272 +
Chr1	stalkie_big_nohaplotig	exon	29383158	29383264	100	-	.	Parent=FBgn0036059.1.mrna1;Target=FBgn0036059.1 752 858 +
Chr1	stalkie_big_nohaplotig	exon	29383895	29384095	100	-	.	Parent=FBgn0036059.1.mrna1;Target=FBgn0036059.1 551 751 +
Chr1	stalkie_big_nohaplotig	exon	29384156	29384429	100	-	.	Parent=FBgn0036059.1.mrna1;Target=FBgn0036059.1 277 550 +
Chr1	stalkie_big_nohaplotig	exon	29388388	29388541	100	-	.	Parent=FBgn0036059.1.mrna1;Target=FBgn0036059.1 123 276 +
Chr1	stalkie_big_nohaplotig	exon	29388613	29388734	100	-	.	Parent=FBgn0036059.1.mrna1;Target=FBgn0036059.1 1 122 +
Chr1	stalkie_big_nohaplotig	CDS	29379034	29379447	.	-	0	Parent=FBgn0036059.1.mrna1;Target=FBgn0036059.1 859 1272 +
Chr1	stalkie_big_nohaplotig	CDS	29383158	29383264	.	-	2	Parent=FBgn0036059.1.mrna1;Target=FBgn0036059.1 752 858 +
Chr1	stalkie_big_nohaplotig	CDS	29383895	29384095	.	-	2	Parent=FBgn0036059.1.mrna1;Target=FBgn0036059.1 551 751 +
Chr1	stalkie_big_nohaplotig	CDS	29384156	29384429	.	-	0	Parent=FBgn0036059.1.mrna1;Target=FBgn0036059.1 277 550 +
Chr1	stalkie_big_nohaplotig	CDS	29388388	29388541	.	-	1	Parent=FBgn0036059.1.mrna1;Target=FBgn0036059.1 123 276 +
Chr1	stalkie_big_nohaplotig	CDS	29388613	29388734	.	-	0	Parent=FBgn0036059.1.mrna1;Target=FBgn0036059.1 1 122 +
Chr1	gffcl	locus	29386724	29387934	.	-	.	ID=RLOC_00006818;geneIDs=comp154892_c0_seq1.path1;transcripts=comp154892_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29386724	29387934	.	-	.	ID=comp154892_c0_seq1.mrna1;geneID=comp154892_c0_seq1.path1;Name=comp154892_c0_seq1;Dir=indeterminatecoverage=88.2;identity=98.5;matches=1194;mismatches=16;indels=2;unknowns=0;Target=comp154892_c0_seq1 1230 20 .;CDS_Target=comp154892_c0_seq1 299 195 .;locus=RLOC_00006818
Chr1	stalkie_big_nohaplotig	exon	29386724	29387934	98	-	.	Parent=comp154892_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29387654	29387759	.	-	0	Parent=comp154892_c0_seq1.mrna1
Chr1	gffcl	locus	29392546	29405088	.	+	.	ID=RLOC_00006819;geneIDs=FBgn0036058.1.path1;transcripts=FBgn0036058.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29392546	29405088	.	+	.	ID=FBgn0036058.1.mrna1;geneID=FBgn0036058.1.path1;Name=FBgn0036058.1;Dir=sensecoverage=100.0;identity=100.0;matches=786;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006819
Chr1	stalkie_big_nohaplotig	exon	29392546	29392660	100	+	.	Parent=FBgn0036058.1.mrna1;Target=FBgn0036058.1 1 115 +
Chr1	stalkie_big_nohaplotig	exon	29401380	29401561	100	+	.	Parent=FBgn0036058.1.mrna1;Target=FBgn0036058.1 116 297 +
Chr1	stalkie_big_nohaplotig	exon	29401619	29401828	100	+	.	Parent=FBgn0036058.1.mrna1;Target=FBgn0036058.1 298 507 +
Chr1	stalkie_big_nohaplotig	exon	29401905	29402069	100	+	.	Parent=FBgn0036058.1.mrna1;Target=FBgn0036058.1 508 672 +
Chr1	stalkie_big_nohaplotig	exon	29404975	29405088	100	+	.	Parent=FBgn0036058.1.mrna1;Target=FBgn0036058.1 673 786 +
Chr1	stalkie_big_nohaplotig	CDS	29392546	29392660	.	+	0	Parent=FBgn0036058.1.mrna1;Target=FBgn0036058.1 1 115 +
Chr1	stalkie_big_nohaplotig	CDS	29401380	29401561	.	+	2	Parent=FBgn0036058.1.mrna1;Target=FBgn0036058.1 116 297 +
Chr1	stalkie_big_nohaplotig	CDS	29401619	29401828	.	+	0	Parent=FBgn0036058.1.mrna1;Target=FBgn0036058.1 298 507 +
Chr1	stalkie_big_nohaplotig	CDS	29401905	29402069	.	+	0	Parent=FBgn0036058.1.mrna1;Target=FBgn0036058.1 508 672 +
Chr1	stalkie_big_nohaplotig	CDS	29404975	29405088	.	+	0	Parent=FBgn0036058.1.mrna1;Target=FBgn0036058.1 673 786 +
Chr1	gffcl	locus	29405538	29406338	.	-	.	ID=RLOC_00006820;geneIDs=comp153660_c0_seq1.path1;transcripts=comp153660_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29405538	29406338	.	-	.	ID=comp153660_c0_seq1.mrna1;geneID=comp153660_c0_seq1.path1;Name=comp153660_c0_seq1;Dir=indeterminatecoverage=98.7;identity=98.3;matches=793;mismatches=8;indels=6;unknowns=0;Target=comp153660_c0_seq1 807 1 .;CDS_Target=comp153660_c0_seq1 578 498 .;locus=RLOC_00006820
Chr1	stalkie_big_nohaplotig	exon	29405538	29406338	98	-	.	Parent=comp153660_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29405764	29405844	.	-	0	Parent=comp153660_c0_seq1.mrna1
Chr1	gffcl	locus	29409012	29417111	.	+	.	ID=RLOC_00006821;geneIDs=FBgn0011836.1.path1;transcripts=FBgn0011836.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29409012	29417111	.	+	.	ID=FBgn0011836.1.mrna1;geneID=FBgn0011836.1.path1;Name=FBgn0011836.1;Dir=sensecoverage=100.0;identity=99.1;matches=3661;mismatches=35;indels=0;unknowns=0;locus=RLOC_00006821
Chr1	stalkie_big_nohaplotig	exon	29409012	29409073	100	+	.	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 1 62 +
Chr1	stalkie_big_nohaplotig	exon	29409133	29409187	100	+	.	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 63 117 +
Chr1	stalkie_big_nohaplotig	exon	29409248	29409411	100	+	.	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 118 281 +
Chr1	stalkie_big_nohaplotig	exon	29409483	29410104	99	+	.	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 282 903 +
Chr1	stalkie_big_nohaplotig	exon	29410164	29410691	98	+	.	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 904 1431 +
Chr1	stalkie_big_nohaplotig	exon	29410751	29411199	98	+	.	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 1432 1880 +
Chr1	stalkie_big_nohaplotig	exon	29411263	29411512	98	+	.	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 1881 2130 +
Chr1	stalkie_big_nohaplotig	exon	29412815	29412977	99	+	.	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 2131 2293 +
Chr1	stalkie_big_nohaplotig	exon	29413062	29413272	98	+	.	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 2294 2504 +
Chr1	stalkie_big_nohaplotig	exon	29413329	29413721	99	+	.	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 2505 2897 +
Chr1	stalkie_big_nohaplotig	exon	29413778	29414342	99	+	.	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 2898 3462 +
Chr1	stalkie_big_nohaplotig	exon	29416878	29417111	100	+	.	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 3463 3696 +
Chr1	stalkie_big_nohaplotig	CDS	29409012	29409073	.	+	0	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 1 62 +
Chr1	stalkie_big_nohaplotig	CDS	29409133	29409187	.	+	1	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 63 117 +
Chr1	stalkie_big_nohaplotig	CDS	29409248	29409411	.	+	0	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 118 281 +
Chr1	stalkie_big_nohaplotig	CDS	29409483	29410104	.	+	1	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 282 903 +
Chr1	stalkie_big_nohaplotig	CDS	29410164	29410691	.	+	0	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 904 1431 +
Chr1	stalkie_big_nohaplotig	CDS	29410751	29411199	.	+	0	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 1432 1880 +
Chr1	stalkie_big_nohaplotig	CDS	29411263	29411512	.	+	1	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 1881 2130 +
Chr1	stalkie_big_nohaplotig	CDS	29412815	29412977	.	+	0	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 2131 2293 +
Chr1	stalkie_big_nohaplotig	CDS	29413062	29413272	.	+	2	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 2294 2504 +
Chr1	stalkie_big_nohaplotig	CDS	29413329	29413721	.	+	1	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 2505 2897 +
Chr1	stalkie_big_nohaplotig	CDS	29413778	29414342	.	+	1	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 2898 3462 +
Chr1	stalkie_big_nohaplotig	CDS	29416878	29417111	.	+	0	Parent=FBgn0011836.1.mrna1;Target=FBgn0011836.1 3463 3696 +
Chr1	gffcl	locus	29417598	29419121	.	-	.	ID=RLOC_00006822;geneIDs=FBgn0085411.1.path1;transcripts=FBgn0085411.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29417598	29419121	.	-	.	ID=FBgn0085411.1.mrna1;geneID=FBgn0085411.1.path1;Name=FBgn0085411.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1512;mismatches=12;indels=0;unknowns=0;Target=FBgn0085411.1 1524 1 .;locus=RLOC_00006822
Chr1	stalkie_big_nohaplotig	exon	29417598	29419121	99	-	.	Parent=FBgn0085411.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29417598	29419121	.	-	0	Parent=FBgn0085411.1.mrna1
Chr1	gffcl	locus	29622749	29623121	.	+	.	ID=RLOC_00006823;geneIDs=comp136085_c0_seq1.path1;transcripts=comp136085_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29622749	29623121	.	+	.	ID=comp136085_c0_seq1.mrna1;geneID=comp136085_c0_seq1.path1;Name=comp136085_c0_seq1;Dir=indeterminatecoverage=94.4;identity=99.5;matches=371;mismatches=2;indels=0;unknowns=0;Target=comp136085_c0_seq1 395 23 .;CDS_Target=comp136085_c0_seq1 140 24 .;locus=RLOC_00006823
Chr1	stalkie_big_nohaplotig	exon	29622749	29623121	99	+	.	Parent=comp136085_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29622750	29622866	.	+	0	Parent=comp136085_c0_seq1.mrna1
Chr1	gffcl	locus	29623235	29623842	.	-	.	ID=RLOC_00006824;geneIDs=comp148962_c0_seq1.path1;transcripts=comp148962_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29623235	29623842	.	-	.	ID=comp148962_c0_seq1.mrna1;geneID=comp148962_c0_seq1.path1;Name=comp148962_c0_seq1;Dir=indeterminatecoverage=99.7;identity=93.1;matches=584;mismatches=24;indels=19;unknowns=0;Target=comp148962_c0_seq1 629 3 .;CDS_Target=comp148962_c0_seq1 510 424 .;locus=RLOC_00006824
Chr1	stalkie_big_nohaplotig	exon	29623235	29623842	93	-	.	Parent=comp148962_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29623354	29623421	.	-	0	Parent=comp148962_c0_seq1.mrna1
Chr1	gffcl	locus	29625084	29625862	.	-	.	ID=RLOC_00006825;geneIDs=comp142380_c0_seq1.path1,comp150255_c0_seq1.path1;transcripts=comp150255_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29625084	29625503	.	-	.	ID=comp150255_c0_seq1.mrna1;geneID=comp150255_c0_seq1.path1;Name=comp150255_c0_seq1;Dir=indeterminatecoverage=99.1;identity=91.4;matches=393;mismatches=26;indels=11;unknowns=0;Target=comp150255_c0_seq1 433 5 .;CDS_Target=comp150255_c0_seq1 178 89 .;locus=RLOC_00006825
Chr1	stalkie_big_nohaplotig	exon	29625084	29625503	91	-	.	Parent=comp150255_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29625334	29625419	.	-	0	Parent=comp150255_c0_seq1.mrna1
Chr1	gffcl	locus	29628600	29628956	.	+	.	ID=RLOC_00006826;geneIDs=comp118491_c0_seq1.path1;transcripts=comp118491_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29628600	29628956	.	+	.	ID=comp118491_c0_seq1.mrna1;geneID=comp118491_c0_seq1.path1;Name=comp118491_c0_seq1;Dir=indeterminatecoverage=86.2;identity=100.0;matches=357;mismatches=0;indels=0;unknowns=0;Target=comp118491_c0_seq1 414 58 .;CDS_Target=comp118491_c0_seq1 285 184 .;locus=RLOC_00006826
Chr1	stalkie_big_nohaplotig	exon	29628600	29628956	100	+	.	Parent=comp118491_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29628726	29628827	.	+	0	Parent=comp118491_c0_seq1.mrna1
Chr1	gffcl	locus	29630876	29631134	.	+	.	ID=RLOC_00006827;geneIDs=comp115166_c0_seq1.path1;transcripts=comp115166_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29630876	29631134	.	+	.	ID=comp115166_c0_seq1.mrna1;geneID=comp115166_c0_seq1.path1;Name=comp115166_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=259;mismatches=0;indels=0;unknowns=0;Target=comp115166_c0_seq1 259 1 .;CDS_Target=comp115166_c0_seq1 104 3 .;locus=RLOC_00006827
Chr1	stalkie_big_nohaplotig	exon	29630876	29631134	100	+	.	Parent=comp115166_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29630878	29630979	.	+	0	Parent=comp115166_c0_seq1.mrna1
Chr1	gffcl	locus	29631352	29633356	.	-	.	ID=RLOC_00006828;geneIDs=comp158759_c0_seq1.path1;transcripts=comp158759_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29631352	29633356	.	-	.	ID=comp158759_c0_seq1.mrna1;geneID=comp158759_c0_seq1.path1;Name=comp158759_c0_seq1;Dir=antisensecoverage=98.0;identity=99.7;matches=1803;mismatches=5;indels=1;unknowns=0;Target=comp158759_c0_seq1 1381 1734 .;locus=RLOC_00006828
Chr1	stalkie_big_nohaplotig	exon	29631352	29631823	99	-	.	Parent=comp158759_c0_seq1.mrna1;Target=comp158759_c0_seq1 37 508 -
Chr1	stalkie_big_nohaplotig	exon	29632021	29633356	99	-	.	Parent=comp158759_c0_seq1.mrna1;Target=comp158759_c0_seq1 509 1845 -
Chr1	stalkie_big_nohaplotig	CDS	29632892	29633245	.	-	0	Parent=comp158759_c0_seq1.mrna1
Chr1	gffcl	locus	29644999	29645581	.	+	.	ID=RLOC_00006829;geneIDs=comp149109_c0_seq1.path1;transcripts=comp149109_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29644999	29645581	.	+	.	ID=comp149109_c0_seq1.mrna1;geneID=comp149109_c0_seq1.path1;Name=comp149109_c0_seq1;Dir=indeterminatecoverage=35.6;identity=99.3;matches=579;mismatches=4;indels=0;unknowns=0;Target=comp149109_c0_seq1 588 6 .;locus=RLOC_00006829
Chr1	stalkie_big_nohaplotig	exon	29644999	29645581	99	+	.	Parent=comp149109_c0_seq1.mrna1
Chr1	gffcl	locus	29652737	29653466	.	+	.	ID=RLOC_00006830;geneIDs=FBgn0035975.1.path1;transcripts=FBgn0035975.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29652737	29653466	.	+	.	ID=FBgn0035975.1.mrna1;geneID=FBgn0035975.1.path1;Name=FBgn0035975.1;Dir=sensecoverage=98.2;identity=100.0;matches=589;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006830
Chr1	stalkie_big_nohaplotig	exon	29652737	29652980	100	+	.	Parent=FBgn0035975.1.mrna1;Target=FBgn0035975.1 12 255 +
Chr1	stalkie_big_nohaplotig	exon	29653058	29653264	100	+	.	Parent=FBgn0035975.1.mrna1;Target=FBgn0035975.1 256 462 +
Chr1	stalkie_big_nohaplotig	exon	29653329	29653466	100	+	.	Parent=FBgn0035975.1.mrna1;Target=FBgn0035975.1 463 600 +
Chr1	stalkie_big_nohaplotig	CDS	29652738	29652980	.	+	0	Parent=FBgn0035975.1.mrna1;Target=FBgn0035975.1 13 255 +
Chr1	stalkie_big_nohaplotig	CDS	29653058	29653264	.	+	0	Parent=FBgn0035975.1.mrna1;Target=FBgn0035975.1 256 462 +
Chr1	stalkie_big_nohaplotig	CDS	29653329	29653466	.	+	0	Parent=FBgn0035975.1.mrna1;Target=FBgn0035975.1 463 600 +
Chr1	gffcl	locus	29689818	29691734	.	-	.	ID=RLOC_00006833;geneIDs=FBgn0261788.1.path1;transcripts=FBgn0261788.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29689818	29691734	.	-	.	ID=FBgn0261788.1.mrna1;geneID=FBgn0261788.1.path1;Name=FBgn0261788.1;Dir=sensecoverage=100.0;identity=99.7;matches=1612;mismatches=5;indels=0;unknowns=0;locus=RLOC_00006833
Chr1	stalkie_big_nohaplotig	exon	29689818	29690114	99	-	.	Parent=FBgn0261788.1.mrna1;Target=FBgn0261788.1 1321 1617 +
Chr1	stalkie_big_nohaplotig	exon	29690183	29690947	99	-	.	Parent=FBgn0261788.1.mrna1;Target=FBgn0261788.1 556 1320 +
Chr1	stalkie_big_nohaplotig	exon	29691019	29691471	99	-	.	Parent=FBgn0261788.1.mrna1;Target=FBgn0261788.1 103 555 +
Chr1	stalkie_big_nohaplotig	exon	29691633	29691734	99	-	.	Parent=FBgn0261788.1.mrna1;Target=FBgn0261788.1 1 102 +
Chr1	stalkie_big_nohaplotig	CDS	29689818	29690114	.	-	0	Parent=FBgn0261788.1.mrna1;Target=FBgn0261788.1 1321 1617 +
Chr1	stalkie_big_nohaplotig	CDS	29690183	29690947	.	-	0	Parent=FBgn0261788.1.mrna1;Target=FBgn0261788.1 556 1320 +
Chr1	stalkie_big_nohaplotig	CDS	29691019	29691471	.	-	0	Parent=FBgn0261788.1.mrna1;Target=FBgn0261788.1 103 555 +
Chr1	stalkie_big_nohaplotig	CDS	29691633	29691734	.	-	0	Parent=FBgn0261788.1.mrna1;Target=FBgn0261788.1 1 102 +
Chr1	gffcl	locus	29718405	29719333	.	+	.	ID=RLOC_00006834;geneIDs=FBgn0035811.1.path1;transcripts=FBgn0035811.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29718405	29719333	.	+	.	ID=FBgn0035811.1.mrna1;geneID=FBgn0035811.1.path1;Name=FBgn0035811.1;Dir=sensecoverage=31.4;identity=99.5;matches=403;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006834
Chr1	stalkie_big_nohaplotig	exon	29718405	29718458	100	+	.	Parent=FBgn0035811.1.mrna1;Target=FBgn0035811.1 1 54 +
Chr1	stalkie_big_nohaplotig	exon	29718983	29719333	99	+	.	Parent=FBgn0035811.1.mrna1;Target=FBgn0035811.1 55 405 +
Chr1	stalkie_big_nohaplotig	CDS	29718405	29718458	.	+	0	Parent=FBgn0035811.1.mrna1;Target=FBgn0035811.1 1 54 +
Chr1	stalkie_big_nohaplotig	CDS	29718983	29719333	.	+	0	Parent=FBgn0035811.1.mrna1;Target=FBgn0035811.1 55 405 +
Chr1	gffcl	locus	29743091	29743384	.	+	.	ID=RLOC_00006835;geneIDs=comp470412_c0_seq1.path1;transcripts=comp470412_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29743091	29743384	.	+	.	ID=comp470412_c0_seq1.mrna1;geneID=comp470412_c0_seq1.path1;Name=comp470412_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=294;mismatches=0;indels=0;unknowns=0;Target=comp470412_c0_seq1 294 1 .;CDS_Target=comp470412_c0_seq1 294 166 .;locus=RLOC_00006835
Chr1	stalkie_big_nohaplotig	exon	29743091	29743384	100	+	.	Parent=comp470412_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29743256	29743384	.	+	0	Parent=comp470412_c0_seq1.mrna1
Chr1	gffcl	locus	29759006	29759209	.	+	.	ID=RLOC_00006836;geneIDs=comp135893_c0_seq1.path1;transcripts=comp135893_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29759006	29759209	.	+	.	ID=comp135893_c0_seq1.mrna1;geneID=comp135893_c0_seq1.path1;Name=comp135893_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=201;mismatches=3;indels=0;unknowns=0;Target=comp135893_c0_seq1 204 1 .;CDS_Target=comp135893_c0_seq1 202 2 .;locus=RLOC_00006836
Chr1	stalkie_big_nohaplotig	exon	29759006	29759209	98	+	.	Parent=comp135893_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29759007	29759207	.	+	0	Parent=comp135893_c0_seq1.mrna1
Chr1	gffcl	locus	29778753	29779287	.	+	.	ID=RLOC_00006838;geneIDs=comp148835_c2_seq1.path1;transcripts=comp148835_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29778753	29779287	.	+	.	ID=comp148835_c2_seq1.mrna1;geneID=comp148835_c2_seq1.path1;Name=comp148835_c2_seq1;Dir=indeterminatecoverage=99.6;identity=95.9;matches=513;mismatches=17;indels=5;unknowns=0;Target=comp148835_c2_seq1 532 3 .;CDS_Target=comp148835_c2_seq1 46 5 .;locus=RLOC_00006838
Chr1	stalkie_big_nohaplotig	exon	29778753	29779287	95	+	.	Parent=comp148835_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29778755	29778800	.	+	0	Parent=comp148835_c2_seq1.mrna1
Chr1	gffcl	locus	29798294	29798895	.	+	.	ID=RLOC_00006840;geneIDs=comp152262_c0_seq1.path1;transcripts=comp152262_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29798294	29798895	.	+	.	ID=comp152262_c0_seq1.mrna1;geneID=comp152262_c0_seq1.path1;Name=comp152262_c0_seq1;Dir=indeterminatecoverage=97.6;identity=96.7;matches=589;mismatches=13;indels=7;unknowns=0;Target=comp152262_c0_seq1 624 16 .;CDS_Target=comp152262_c0_seq1 25 17 .;locus=RLOC_00006840
Chr1	stalkie_big_nohaplotig	exon	29798294	29798895	96	+	.	Parent=comp152262_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29798295	29798303	.	+	0	Parent=comp152262_c0_seq1.mrna1
Chr1	gffcl	locus	29802831	29804815	.	+	.	ID=RLOC_00006841;geneIDs=FBgn0035977.1.path1;transcripts=FBgn0035977.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29802831	29804815	.	+	.	ID=FBgn0035977.1.mrna1;geneID=FBgn0035977.1.path1;Name=FBgn0035977.1;Dir=sensecoverage=100.0;identity=98.1;matches=1110;mismatches=21;indels=0;unknowns=0;locus=RLOC_00006841
Chr1	stalkie_big_nohaplotig	exon	29802831	29803043	99	+	.	Parent=FBgn0035977.1.mrna1;Target=FBgn0035977.1 1 213 +
Chr1	stalkie_big_nohaplotig	exon	29803150	29803516	99	+	.	Parent=FBgn0035977.1.mrna1;Target=FBgn0035977.1 214 580 +
Chr1	stalkie_big_nohaplotig	exon	29804190	29804341	94	+	.	Parent=FBgn0035977.1.mrna1;Target=FBgn0035977.1 581 732 +
Chr1	stalkie_big_nohaplotig	exon	29804417	29804815	97	+	.	Parent=FBgn0035977.1.mrna1;Target=FBgn0035977.1 733 1131 +
Chr1	stalkie_big_nohaplotig	CDS	29802831	29803043	.	+	0	Parent=FBgn0035977.1.mrna1;Target=FBgn0035977.1 1 213 +
Chr1	stalkie_big_nohaplotig	CDS	29803150	29803516	.	+	0	Parent=FBgn0035977.1.mrna1;Target=FBgn0035977.1 214 580 +
Chr1	stalkie_big_nohaplotig	CDS	29804190	29804341	.	+	2	Parent=FBgn0035977.1.mrna1;Target=FBgn0035977.1 581 732 +
Chr1	stalkie_big_nohaplotig	CDS	29804417	29804815	.	+	0	Parent=FBgn0035977.1.mrna1;Target=FBgn0035977.1 733 1131 +
Chr1	gffcl	locus	29806832	29807439	.	-	.	ID=RLOC_00006842;geneIDs=comp115778_c0_seq1.path1;transcripts=comp115778_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29806832	29807439	.	-	.	ID=comp115778_c0_seq1.mrna1;geneID=comp115778_c0_seq1.path1;Name=comp115778_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.3;matches=584;mismatches=19;indels=10;unknowns=0;Target=comp115778_c0_seq1 608 1 .;CDS_Target=comp115778_c0_seq1 181 56 .;locus=RLOC_00006842
Chr1	stalkie_big_nohaplotig	exon	29806832	29807439	95	-	.	Parent=comp115778_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29807257	29807384	.	-	0	Parent=comp115778_c0_seq1.mrna1
Chr1	gffcl	locus	29807583	29809732	.	-	.	ID=RLOC_00006843;geneIDs=comp135827_c0_seq1.path1;transcripts=comp135827_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29807583	29809732	.	-	.	ID=comp135827_c0_seq1.mrna1;geneID=comp135827_c0_seq1.path1;Name=comp135827_c0_seq1;Dir=sensecoverage=94.2;identity=93.4;matches=337;mismatches=21;indels=3;unknowns=0;Target=comp135827_c0_seq1 17 88 +;locus=RLOC_00006843
Chr1	stalkie_big_nohaplotig	exon	29807583	29807739	100	-	.	Parent=comp135827_c0_seq1.mrna1;Target=comp135827_c0_seq1 216 372 +
Chr1	stalkie_big_nohaplotig	exon	29809529	29809732	88	-	.	Parent=comp135827_c0_seq1.mrna1;Target=comp135827_c0_seq1 15 215 +
Chr1	stalkie_big_nohaplotig	CDS	29809656	29809730	.	-	0	Parent=comp135827_c0_seq1.mrna1
Chr1	gffcl	locus	29815917	29827753	.	-	.	ID=RLOC_00006844;geneIDs=FBgn0035976.1.path1;transcripts=FBgn0035976.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29815917	29827753	.	-	.	ID=FBgn0035976.1.mrna1;geneID=FBgn0035976.1.path1;Name=FBgn0035976.1;Dir=sensecoverage=100.0;identity=99.7;matches=1722;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006844
Chr1	stalkie_big_nohaplotig	exon	29815917	29816294	99	-	.	Parent=FBgn0035976.1.mrna1;Target=FBgn0035976.1 1351 1728 +
Chr1	stalkie_big_nohaplotig	exon	29816354	29816517	100	-	.	Parent=FBgn0035976.1.mrna1;Target=FBgn0035976.1 1187 1350 +
Chr1	stalkie_big_nohaplotig	exon	29816903	29817070	99	-	.	Parent=FBgn0035976.1.mrna1;Target=FBgn0035976.1 1019 1186 +
Chr1	stalkie_big_nohaplotig	exon	29826736	29827753	99	-	.	Parent=FBgn0035976.1.mrna1;Target=FBgn0035976.1 1 1018 +
Chr1	stalkie_big_nohaplotig	CDS	29815917	29816294	.	-	0	Parent=FBgn0035976.1.mrna1;Target=FBgn0035976.1 1351 1728 +
Chr1	stalkie_big_nohaplotig	CDS	29816354	29816517	.	-	2	Parent=FBgn0035976.1.mrna1;Target=FBgn0035976.1 1187 1350 +
Chr1	stalkie_big_nohaplotig	CDS	29816903	29817070	.	-	2	Parent=FBgn0035976.1.mrna1;Target=FBgn0035976.1 1019 1186 +
Chr1	stalkie_big_nohaplotig	CDS	29826736	29827753	.	-	0	Parent=FBgn0035976.1.mrna1;Target=FBgn0035976.1 1 1018 +
Chr1	gffcl	locus	29839110	29859918	.	+	.	ID=RLOC_00006845;geneIDs=FBgn0036566.1.path2;transcripts=FBgn0036566.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	29839110	29859918	.	+	.	ID=FBgn0036566.1.mrna2;geneID=FBgn0036566.1.path2;Name=FBgn0036566.1;Dir=sensecoverage=100.0;identity=99.4;matches=2612;mismatches=16;indels=0;unknowns=0;locus=RLOC_00006845
Chr1	stalkie_big_nohaplotig	exon	29839110	29839202	100	+	.	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 1 93 +
Chr1	stalkie_big_nohaplotig	exon	29845145	29845421	99	+	.	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 94 370 +
Chr1	stalkie_big_nohaplotig	exon	29847740	29847769	100	+	.	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 371 400 +
Chr1	stalkie_big_nohaplotig	exon	29847849	29847988	98	+	.	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 401 540 +
Chr1	stalkie_big_nohaplotig	exon	29848056	29848259	100	+	.	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 541 744 +
Chr1	stalkie_big_nohaplotig	exon	29848328	29848960	98	+	.	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 745 1377 +
Chr1	stalkie_big_nohaplotig	exon	29849023	29849240	99	+	.	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 1378 1595 +
Chr1	stalkie_big_nohaplotig	exon	29849349	29849563	99	+	.	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 1596 1810 +
Chr1	stalkie_big_nohaplotig	exon	29849625	29849875	99	+	.	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 1811 2061 +
Chr1	stalkie_big_nohaplotig	exon	29851244	29851344	100	+	.	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 2062 2162 +
Chr1	stalkie_big_nohaplotig	exon	29858386	29858549	100	+	.	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 2163 2326 +
Chr1	stalkie_big_nohaplotig	exon	29858617	29858830	100	+	.	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 2327 2540 +
Chr1	stalkie_big_nohaplotig	exon	29859831	29859918	100	+	.	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 2541 2628 +
Chr1	stalkie_big_nohaplotig	CDS	29839110	29839202	.	+	0	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 1 93 +
Chr1	stalkie_big_nohaplotig	CDS	29845145	29845421	.	+	0	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 94 370 +
Chr1	stalkie_big_nohaplotig	CDS	29847740	29847769	.	+	2	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 371 400 +
Chr1	stalkie_big_nohaplotig	CDS	29847849	29847988	.	+	2	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 401 540 +
Chr1	stalkie_big_nohaplotig	CDS	29848056	29848259	.	+	0	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 541 744 +
Chr1	stalkie_big_nohaplotig	CDS	29848328	29848960	.	+	0	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 745 1377 +
Chr1	stalkie_big_nohaplotig	CDS	29849023	29849240	.	+	0	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 1378 1595 +
Chr1	stalkie_big_nohaplotig	CDS	29849349	29849563	.	+	1	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 1596 1810 +
Chr1	stalkie_big_nohaplotig	CDS	29849625	29849875	.	+	2	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 1811 2061 +
Chr1	stalkie_big_nohaplotig	CDS	29851244	29851344	.	+	0	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 2062 2162 +
Chr1	stalkie_big_nohaplotig	CDS	29858386	29858549	.	+	1	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 2163 2326 +
Chr1	stalkie_big_nohaplotig	CDS	29858617	29858830	.	+	2	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 2327 2540 +
Chr1	stalkie_big_nohaplotig	CDS	29859831	29859918	.	+	1	Parent=FBgn0036566.1.mrna2;Target=FBgn0036566.1 2541 2628 +
Chr1	gffcl	locus	29853784	29863565	.	-	.	ID=RLOC_00006846;geneIDs=FBgn0036567.1.path1;transcripts=FBgn0036567.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29853784	29863565	.	-	.	ID=FBgn0036567.1.mrna1;geneID=FBgn0036567.1.path1;Name=FBgn0036567.1;Dir=sensecoverage=100.0;identity=99.3;matches=1350;mismatches=9;indels=0;unknowns=0;locus=RLOC_00006846
Chr1	stalkie_big_nohaplotig	exon	29853784	29853841	100	-	.	Parent=FBgn0036567.1.mrna1;Target=FBgn0036567.1 1302 1359 +
Chr1	stalkie_big_nohaplotig	exon	29853905	29853982	98	-	.	Parent=FBgn0036567.1.mrna1;Target=FBgn0036567.1 1224 1301 +
Chr1	stalkie_big_nohaplotig	exon	29862125	29862237	100	-	.	Parent=FBgn0036567.1.mrna1;Target=FBgn0036567.1 1111 1223 +
Chr1	stalkie_big_nohaplotig	exon	29862291	29862567	98	-	.	Parent=FBgn0036567.1.mrna1;Target=FBgn0036567.1 834 1110 +
Chr1	stalkie_big_nohaplotig	exon	29862733	29863565	99	-	.	Parent=FBgn0036567.1.mrna1;Target=FBgn0036567.1 1 833 +
Chr1	stalkie_big_nohaplotig	CDS	29853784	29853841	.	-	1	Parent=FBgn0036567.1.mrna1;Target=FBgn0036567.1 1302 1359 +
Chr1	stalkie_big_nohaplotig	CDS	29853905	29853982	.	-	1	Parent=FBgn0036567.1.mrna1;Target=FBgn0036567.1 1224 1301 +
Chr1	stalkie_big_nohaplotig	CDS	29862125	29862237	.	-	0	Parent=FBgn0036567.1.mrna1;Target=FBgn0036567.1 1111 1223 +
Chr1	stalkie_big_nohaplotig	CDS	29862291	29862567	.	-	1	Parent=FBgn0036567.1.mrna1;Target=FBgn0036567.1 834 1110 +
Chr1	stalkie_big_nohaplotig	CDS	29862733	29863565	.	-	0	Parent=FBgn0036567.1.mrna1;Target=FBgn0036567.1 1 833 +
Chr1	gffcl	locus	29867916	29872288	.	.	.	ID=RLOC_00006847;geneIDs=FBgn0036569.1.path1,comp160745_c0_seq1.path1;transcripts=FBgn0036569.1.mrna1,comp160745_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29867916	29872288	.	+	.	ID=FBgn0036569.1.mrna1;geneID=FBgn0036569.1.path1;Name=FBgn0036569.1;Dir=sensecoverage=99.7;identity=98.9;matches=1863;mismatches=21;indels=0;unknowns=0;locus=RLOC_00006847
Chr1	stalkie_big_nohaplotig	exon	29867916	29868095	99	+	.	Parent=FBgn0036569.1.mrna1;Target=FBgn0036569.1 7 186 +
Chr1	stalkie_big_nohaplotig	exon	29868174	29868416	99	+	.	Parent=FBgn0036569.1.mrna1;Target=FBgn0036569.1 187 429 +
Chr1	stalkie_big_nohaplotig	exon	29868524	29868690	99	+	.	Parent=FBgn0036569.1.mrna1;Target=FBgn0036569.1 430 596 +
Chr1	stalkie_big_nohaplotig	exon	29868745	29869047	97	+	.	Parent=FBgn0036569.1.mrna1;Target=FBgn0036569.1 597 899 +
Chr1	stalkie_big_nohaplotig	exon	29869107	29869223	100	+	.	Parent=FBgn0036569.1.mrna1;Target=FBgn0036569.1 900 1016 +
Chr1	stalkie_big_nohaplotig	exon	29869287	29869500	99	+	.	Parent=FBgn0036569.1.mrna1;Target=FBgn0036569.1 1017 1230 +
Chr1	stalkie_big_nohaplotig	exon	29871566	29871800	99	+	.	Parent=FBgn0036569.1.mrna1;Target=FBgn0036569.1 1231 1465 +
Chr1	stalkie_big_nohaplotig	exon	29871864	29872288	98	+	.	Parent=FBgn0036569.1.mrna1;Target=FBgn0036569.1 1466 1890 +
Chr1	stalkie_big_nohaplotig	CDS	29867916	29868095	.	+	0	Parent=FBgn0036569.1.mrna1;Target=FBgn0036569.1 7 186 +
Chr1	stalkie_big_nohaplotig	CDS	29868174	29868416	.	+	0	Parent=FBgn0036569.1.mrna1;Target=FBgn0036569.1 187 429 +
Chr1	stalkie_big_nohaplotig	CDS	29868524	29868690	.	+	0	Parent=FBgn0036569.1.mrna1;Target=FBgn0036569.1 430 596 +
Chr1	stalkie_big_nohaplotig	CDS	29868745	29869047	.	+	1	Parent=FBgn0036569.1.mrna1;Target=FBgn0036569.1 597 899 +
Chr1	stalkie_big_nohaplotig	CDS	29869107	29869223	.	+	1	Parent=FBgn0036569.1.mrna1;Target=FBgn0036569.1 900 1016 +
Chr1	stalkie_big_nohaplotig	CDS	29869287	29869500	.	+	1	Parent=FBgn0036569.1.mrna1;Target=FBgn0036569.1 1017 1230 +
Chr1	stalkie_big_nohaplotig	CDS	29871566	29871800	.	+	0	Parent=FBgn0036569.1.mrna1;Target=FBgn0036569.1 1231 1465 +
Chr1	stalkie_big_nohaplotig	CDS	29871864	29872288	.	+	2	Parent=FBgn0036569.1.mrna1;Target=FBgn0036569.1 1466 1890 +
Chr1	stalkie_big_nohaplotig	mRNA	29870611	29871587	.	-	.	ID=comp160745_c0_seq1.mrna1;geneID=comp160745_c0_seq1.path1;Name=comp160745_c0_seq1;Dir=indeterminatecoverage=99.9;identity=95.7;matches=941;mismatches=29;indels=13;unknowns=0;Target=comp160745_c0_seq1 976 1 .;CDS_Target=comp160745_c0_seq1 787 704 .;locus=RLOC_00006847
Chr1	stalkie_big_nohaplotig	exon	29870611	29871587	95	-	.	Parent=comp160745_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29870807	29870888	.	-	0	Parent=comp160745_c0_seq1.mrna1
Chr1	gffcl	locus	29873526	29875026	.	-	.	ID=RLOC_00006848;geneIDs=FBgn0036570.1.path1;transcripts=FBgn0036570.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29873526	29875026	.	-	.	ID=FBgn0036570.1.mrna1;geneID=FBgn0036570.1.path1;Name=FBgn0036570.1;Dir=sensecoverage=100.0;identity=99.2;matches=1190;mismatches=9;indels=1;unknowns=0;locus=RLOC_00006848
Chr1	stalkie_big_nohaplotig	exon	29873526	29873551	92	-	.	Parent=FBgn0036570.1.mrna1;Target=FBgn0036570.1 1174 1200 +
Chr1	stalkie_big_nohaplotig	exon	29873614	29873927	99	-	.	Parent=FBgn0036570.1.mrna1;Target=FBgn0036570.1 860 1173 +
Chr1	stalkie_big_nohaplotig	exon	29874050	29874296	99	-	.	Parent=FBgn0036570.1.mrna1;Target=FBgn0036570.1 613 859 +
Chr1	stalkie_big_nohaplotig	exon	29874346	29874942	99	-	.	Parent=FBgn0036570.1.mrna1;Target=FBgn0036570.1 16 612 +
Chr1	stalkie_big_nohaplotig	exon	29875012	29875026	100	-	.	Parent=FBgn0036570.1.mrna1;Target=FBgn0036570.1 1 15 +
Chr1	stalkie_big_nohaplotig	CDS	29873526	29873551	.	-	0	Parent=FBgn0036570.1.mrna1;Target=FBgn0036570.1 1174 1200 +
Chr1	stalkie_big_nohaplotig	CDS	29873614	29873927	.	-	2	Parent=FBgn0036570.1.mrna1;Target=FBgn0036570.1 860 1173 +
Chr1	stalkie_big_nohaplotig	CDS	29874050	29874296	.	-	0	Parent=FBgn0036570.1.mrna1;Target=FBgn0036570.1 613 859 +
Chr1	stalkie_big_nohaplotig	CDS	29874346	29874942	.	-	0	Parent=FBgn0036570.1.mrna1;Target=FBgn0036570.1 16 612 +
Chr1	stalkie_big_nohaplotig	CDS	29875012	29875026	.	-	0	Parent=FBgn0036570.1.mrna1;Target=FBgn0036570.1 1 15 +
Chr1	gffcl	locus	29920194	29934480	.	-	.	ID=RLOC_00006849;geneIDs=FBgn0036566.1.path1;transcripts=FBgn0036566.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29920194	29934480	.	-	.	ID=FBgn0036566.1.mrna1;geneID=FBgn0036566.1.path1;Name=FBgn0036566.1;Dir=sensecoverage=100.0;identity=99.5;matches=2615;mismatches=13;indels=0;unknowns=0;locus=RLOC_00006849
Chr1	stalkie_big_nohaplotig	exon	29920194	29920281	100	-	.	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 2541 2628 +
Chr1	stalkie_big_nohaplotig	exon	29921282	29921495	100	-	.	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 2327 2540 +
Chr1	stalkie_big_nohaplotig	exon	29921563	29921726	100	-	.	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 2163 2326 +
Chr1	stalkie_big_nohaplotig	exon	29921809	29921909	100	-	.	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 2062 2162 +
Chr1	stalkie_big_nohaplotig	exon	29923369	29923619	99	-	.	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 1811 2061 +
Chr1	stalkie_big_nohaplotig	exon	29923681	29923895	99	-	.	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 1596 1810 +
Chr1	stalkie_big_nohaplotig	exon	29924004	29924221	99	-	.	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 1378 1595 +
Chr1	stalkie_big_nohaplotig	exon	29924284	29924916	99	-	.	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 745 1377 +
Chr1	stalkie_big_nohaplotig	exon	29924985	29925188	100	-	.	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 541 744 +
Chr1	stalkie_big_nohaplotig	exon	29925256	29925395	98	-	.	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 401 540 +
Chr1	stalkie_big_nohaplotig	exon	29925475	29925504	100	-	.	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 371 400 +
Chr1	stalkie_big_nohaplotig	exon	29927802	29928078	99	-	.	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 94 370 +
Chr1	stalkie_big_nohaplotig	exon	29934388	29934480	100	-	.	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 1 93 +
Chr1	stalkie_big_nohaplotig	CDS	29920194	29920281	.	-	1	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 2541 2628 +
Chr1	stalkie_big_nohaplotig	CDS	29921282	29921495	.	-	2	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 2327 2540 +
Chr1	stalkie_big_nohaplotig	CDS	29921563	29921726	.	-	1	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 2163 2326 +
Chr1	stalkie_big_nohaplotig	CDS	29921809	29921909	.	-	0	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 2062 2162 +
Chr1	stalkie_big_nohaplotig	CDS	29923369	29923619	.	-	2	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 1811 2061 +
Chr1	stalkie_big_nohaplotig	CDS	29923681	29923895	.	-	1	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 1596 1810 +
Chr1	stalkie_big_nohaplotig	CDS	29924004	29924221	.	-	0	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 1378 1595 +
Chr1	stalkie_big_nohaplotig	CDS	29924284	29924916	.	-	0	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 745 1377 +
Chr1	stalkie_big_nohaplotig	CDS	29924985	29925188	.	-	0	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 541 744 +
Chr1	stalkie_big_nohaplotig	CDS	29925256	29925395	.	-	2	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 401 540 +
Chr1	stalkie_big_nohaplotig	CDS	29925475	29925504	.	-	2	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 371 400 +
Chr1	stalkie_big_nohaplotig	CDS	29927802	29928078	.	-	0	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 94 370 +
Chr1	stalkie_big_nohaplotig	CDS	29934388	29934480	.	-	0	Parent=FBgn0036566.1.mrna1;Target=FBgn0036566.1 1 93 +
Chr1	gffcl	locus	29939239	29940102	.	+	.	ID=RLOC_00006850;geneIDs=comp148530_c0_seq1.path1;transcripts=comp148530_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29939239	29940102	.	+	.	ID=comp148530_c0_seq1.mrna1;geneID=comp148530_c0_seq1.path1;Name=comp148530_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=636;mismatches=0;indels=4;unknowns=0;locus=RLOC_00006850
Chr1	stalkie_big_nohaplotig	exon	29939239	29939425	100	+	.	Parent=comp148530_c0_seq1.mrna1;Target=comp148530_c0_seq1 454 640 -
Chr1	stalkie_big_nohaplotig	exon	29939654	29940102	99	+	.	Parent=comp148530_c0_seq1.mrna1;Target=comp148530_c0_seq1 1 453 -
Chr1	stalkie_big_nohaplotig	CDS	29939306	29939425	.	+	0	Parent=comp148530_c0_seq1.mrna1;Target=comp148530_c0_seq1 454 573 .
Chr1	stalkie_big_nohaplotig	CDS	29939654	29939827	.	+	0	Parent=comp148530_c0_seq1.mrna1;Target=comp148530_c0_seq1 280 453 .
Chr1	gffcl	locus	29942065	29942676	.	-	.	ID=RLOC_00006851;geneIDs=FBgn0051053.1.path1;transcripts=FBgn0051053.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29942065	29942676	.	-	.	ID=FBgn0051053.1.mrna1;geneID=FBgn0051053.1.path1;Name=FBgn0051053.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=608;mismatches=4;indels=0;unknowns=0;Target=FBgn0051053.1 612 1 .;locus=RLOC_00006851
Chr1	stalkie_big_nohaplotig	exon	29942065	29942676	99	-	.	Parent=FBgn0051053.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29942065	29942676	.	-	0	Parent=FBgn0051053.1.mrna1
Chr1	gffcl	locus	29943624	29944617	.	-	.	ID=RLOC_00006852;geneIDs=FBgn0033274.1.path1;transcripts=FBgn0033274.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29943624	29944617	.	-	.	ID=FBgn0033274.1.mrna1;geneID=FBgn0033274.1.path1;Name=FBgn0033274.1;Dir=sensecoverage=99.6;identity=99.0;matches=491;mismatches=5;indels=0;unknowns=0;locus=RLOC_00006852
Chr1	stalkie_big_nohaplotig	exon	29943624	29943891	98	-	.	Parent=FBgn0033274.1.mrna1;Target=FBgn0033274.1 231 498 +
Chr1	stalkie_big_nohaplotig	exon	29944291	29944499	99	-	.	Parent=FBgn0033274.1.mrna1;Target=FBgn0033274.1 22 230 +
Chr1	stalkie_big_nohaplotig	exon	29944599	29944617	100	-	.	Parent=FBgn0033274.1.mrna1;Target=FBgn0033274.1 3 21 +
Chr1	stalkie_big_nohaplotig	CDS	29943624	29943891	.	-	1	Parent=FBgn0033274.1.mrna1;Target=FBgn0033274.1 231 498 +
Chr1	stalkie_big_nohaplotig	CDS	29944291	29944499	.	-	0	Parent=FBgn0033274.1.mrna1;Target=FBgn0033274.1 22 230 +
Chr1	stalkie_big_nohaplotig	CDS	29944599	29944616	.	-	0	Parent=FBgn0033274.1.mrna1;Target=FBgn0033274.1 4 21 +
Chr1	gffcl	locus	29944830	29945083	.	+	.	ID=RLOC_00006853;geneIDs=comp116571_c0_seq1.path1;transcripts=comp116571_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29944830	29945083	.	+	.	ID=comp116571_c0_seq1.mrna1;geneID=comp116571_c0_seq1.path1;Name=comp116571_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=247;mismatches=7;indels=0;unknowns=0;Target=comp116571_c0_seq1 254 1 .;CDS_Target=comp116571_c0_seq1 147 1 .;locus=RLOC_00006853
Chr1	stalkie_big_nohaplotig	exon	29944830	29945083	97	+	.	Parent=comp116571_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	29944830	29944976	.	+	0	Parent=comp116571_c0_seq1.mrna1
Chr1	gffcl	locus	29945730	29949140	.	+	.	ID=RLOC_00006854;geneIDs=FBgn0263602.1.path1;transcripts=FBgn0263602.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	29945730	29949140	.	+	.	ID=FBgn0263602.1.mrna1;geneID=FBgn0263602.1.path1;Name=FBgn0263602.1;Dir=sensecoverage=100.0;identity=99.8;matches=1075;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006854
Chr1	stalkie_big_nohaplotig	exon	29945730	29945763	100	+	.	Parent=FBgn0263602.1.mrna1;Target=FBgn0263602.1 1 34 +
Chr1	stalkie_big_nohaplotig	exon	29945819	29946780	99	+	.	Parent=FBgn0263602.1.mrna1;Target=FBgn0263602.1 35 996 +
Chr1	stalkie_big_nohaplotig	exon	29949060	29949140	100	+	.	Parent=FBgn0263602.1.mrna1;Target=FBgn0263602.1 997 1077 +
Chr1	stalkie_big_nohaplotig	CDS	29945730	29945763	.	+	0	Parent=FBgn0263602.1.mrna1;Target=FBgn0263602.1 1 34 +
Chr1	stalkie_big_nohaplotig	CDS	29945819	29946780	.	+	2	Parent=FBgn0263602.1.mrna1;Target=FBgn0263602.1 35 996 +
Chr1	stalkie_big_nohaplotig	CDS	29949060	29949140	.	+	0	Parent=FBgn0263602.1.mrna1;Target=FBgn0263602.1 997 1077 +
Chr1	gffcl	locus	30021858	30023632	.	-	.	ID=RLOC_00006855;geneIDs=comp162216_c0_seq1.path1;transcripts=comp162216_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30021858	30023632	.	-	.	ID=comp162216_c0_seq1.mrna1;geneID=comp162216_c0_seq1.path1;Name=comp162216_c0_seq1;Dir=antisensecoverage=99.1;identity=95.6;matches=1207;mismatches=40;indels=15;unknowns=0;Target=comp162216_c0_seq1 834 1154 .;locus=RLOC_00006855
Chr1	stalkie_big_nohaplotig	exon	30021858	30022321	92	-	.	Parent=comp162216_c0_seq1.mrna1;Target=comp162216_c0_seq1 6 482 -
Chr1	stalkie_big_nohaplotig	exon	30022388	30022468	95	-	.	Parent=comp162216_c0_seq1.mrna1;Target=comp162216_c0_seq1 483 563 -
Chr1	stalkie_big_nohaplotig	exon	30022641	30022788	95	-	.	Parent=comp162216_c0_seq1.mrna1;Target=comp162216_c0_seq1 564 711 -
Chr1	stalkie_big_nohaplotig	exon	30023078	30023632	98	-	.	Parent=comp162216_c0_seq1.mrna1;Target=comp162216_c0_seq1 712 1266 -
Chr1	stalkie_big_nohaplotig	CDS	30023200	30023520	.	-	0	Parent=comp162216_c0_seq1.mrna1
Chr1	gffcl	locus	30082924	30083215	.	-	.	ID=RLOC_00006856;geneIDs=comp137331_c0_seq1.path1;transcripts=comp137331_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30082924	30083215	.	-	.	ID=comp137331_c0_seq1.mrna1;geneID=comp137331_c0_seq1.path1;Name=comp137331_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=291;mismatches=1;indels=0;unknowns=0;Target=comp137331_c0_seq1 292 1 .;CDS_Target=comp137331_c0_seq1 187 107 .;locus=RLOC_00006856
Chr1	stalkie_big_nohaplotig	exon	30082924	30083215	99	-	.	Parent=comp137331_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30083029	30083109	.	-	0	Parent=comp137331_c0_seq1.mrna1
Chr1	gffcl	locus	30083755	30109763	.	+	.	ID=RLOC_00006857;geneIDs=comp150445_c1_seq1.path1;transcripts=comp150445_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30083755	30109763	.	+	.	ID=comp150445_c1_seq1.mrna1;geneID=comp150445_c1_seq1.path1;Name=comp150445_c1_seq1;Dir=sensecoverage=99.8;identity=97.5;matches=509;mismatches=13;indels=0;unknowns=0;Target=comp150445_c1_seq1 2 64 +;locus=RLOC_00006857
Chr1	stalkie_big_nohaplotig	exon	30083755	30083989	97	+	.	Parent=comp150445_c1_seq1.mrna1;Target=comp150445_c1_seq1 1 235 +
Chr1	stalkie_big_nohaplotig	exon	30109477	30109763	97	+	.	Parent=comp150445_c1_seq1.mrna1;Target=comp150445_c1_seq1 236 522 +
Chr1	stalkie_big_nohaplotig	CDS	30083756	30083818	.	+	0	Parent=comp150445_c1_seq1.mrna1
Chr1	gffcl	locus	30111596	30113341	.	+	.	ID=RLOC_00006858;geneIDs=FBgn0035385.1.path1;transcripts=FBgn0035385.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30111596	30113341	.	+	.	ID=FBgn0035385.1.mrna1;geneID=FBgn0035385.1.path1;Name=FBgn0035385.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1733;mismatches=13;indels=0;unknowns=0;Target=FBgn0035385.1 1746 1 .;locus=RLOC_00006858
Chr1	stalkie_big_nohaplotig	exon	30111596	30113341	99	+	.	Parent=FBgn0035385.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30111596	30113341	.	+	0	Parent=FBgn0035385.1.mrna1
Chr1	gffcl	locus	30113916	30115204	.	-	.	ID=RLOC_00006859;geneIDs=comp155815_c0_seq1.path1,comp161235_c0_seq1.path1;transcripts=comp161235_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30113916	30114698	.	-	.	ID=comp161235_c0_seq1.mrna1;geneID=comp161235_c0_seq1.path1;Name=comp161235_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.2;matches=754;mismatches=20;indels=18;unknowns=0;Target=comp161235_c0_seq1 783 1 .;CDS_Target=comp161235_c0_seq1 494 378 .;locus=RLOC_00006859
Chr1	stalkie_big_nohaplotig	exon	30113916	30114698	95	-	.	Parent=comp161235_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30114214	30114329	.	-	0	Parent=comp161235_c0_seq1.mrna1
Chr1	gffcl	locus	30115468	30115890	.	-	.	ID=RLOC_00006860;geneIDs=comp152657_c2_seq1.path1;transcripts=comp152657_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30115468	30115890	.	-	.	ID=comp152657_c2_seq1.mrna1;geneID=comp152657_c2_seq1.path1;Name=comp152657_c2_seq1;Dir=indeterminatecoverage=49.9;identity=99.5;matches=421;mismatches=2;indels=0;unknowns=0;Target=comp152657_c2_seq1 423 1 .;CDS_Target=comp152657_c2_seq1 130 29 .;locus=RLOC_00006860
Chr1	stalkie_big_nohaplotig	exon	30115468	30115890	99	-	.	Parent=comp152657_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30115761	30115862	.	-	0	Parent=comp152657_c2_seq1.mrna1
Chr1	gffcl	locus	30115916	30219779	.	-	.	ID=RLOC_00006861;geneIDs=comp158692_c1_seq1.path1;transcripts=comp158692_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30115916	30219779	.	-	.	ID=comp158692_c1_seq1.mrna1;geneID=comp158692_c1_seq1.path1;Name=comp158692_c1_seq1;Dir=sensecoverage=54.0;identity=99.2;matches=496;mismatches=3;indels=1;unknowns=0;Target=comp158692_c1_seq1 3 140 +;locus=RLOC_00006861
Chr1	stalkie_big_nohaplotig	exon	30115916	30115923	100	-	.	Parent=comp158692_c1_seq1.mrna1;Target=comp158692_c1_seq1 554 561 +
Chr1	stalkie_big_nohaplotig	exon	30130998	30131008	100	-	.	Parent=comp158692_c1_seq1.mrna1;Target=comp158692_c1_seq1 489 499 +
Chr1	stalkie_big_nohaplotig	exon	30137211	30137272	100	-	.	Parent=comp158692_c1_seq1.mrna1;Target=comp158692_c1_seq1 427 488 +
Chr1	stalkie_big_nohaplotig	exon	30148557	30148567	100	-	.	Parent=comp158692_c1_seq1.mrna1;Target=comp158692_c1_seq1 406 416 +
Chr1	stalkie_big_nohaplotig	exon	30189017	30189024	100	-	.	Parent=comp158692_c1_seq1.mrna1;Target=comp158692_c1_seq1 398 405 +
Chr1	stalkie_big_nohaplotig	exon	30196930	30196935	100	-	.	Parent=comp158692_c1_seq1.mrna1;Target=comp158692_c1_seq1 392 397 +
Chr1	stalkie_big_nohaplotig	exon	30211835	30211836	100	-	.	Parent=comp158692_c1_seq1.mrna1;Target=comp158692_c1_seq1 390 391 +
Chr1	stalkie_big_nohaplotig	exon	30218669	30218908	98	-	.	Parent=comp158692_c1_seq1.mrna1;Target=comp158692_c1_seq1 151 389 +
Chr1	stalkie_big_nohaplotig	exon	30219630	30219779	100	-	.	Parent=comp158692_c1_seq1.mrna1;Target=comp158692_c1_seq1 1 150 +
Chr1	stalkie_big_nohaplotig	CDS	30219640	30219777	.	-	0	Parent=comp158692_c1_seq1.mrna1
Chr1	gffcl	locus	30116751	30116948	.	+	.	ID=RLOC_00006862;geneIDs=comp151684_c1_seq1.path1;transcripts=comp151684_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30116751	30116948	.	+	.	ID=comp151684_c1_seq1.mrna1;geneID=comp151684_c1_seq1.path1;Name=comp151684_c1_seq1;Dir=indeterminatecoverage=86.1;identity=88.8;matches=183;mismatches=7;indels=16;unknowns=0;Target=comp151684_c1_seq1 230 33 .;CDS_Target=comp151684_c1_seq1 116 33 .;locus=RLOC_00006862
Chr1	stalkie_big_nohaplotig	exon	30116751	30116948	88	+	.	Parent=comp151684_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30116751	30116834	.	+	0	Parent=comp151684_c1_seq1.mrna1
Chr1	gffcl	locus	30178595	30178731	.	+	.	ID=RLOC_00006863;geneIDs=comp160711_c0_seq1.path1;transcripts=comp160711_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30178595	30178731	.	+	.	ID=comp160711_c0_seq1.mrna1;geneID=comp160711_c0_seq1.path1;Name=comp160711_c0_seq1;Dir=indeterminatecoverage=11.9;identity=99.3;matches=136;mismatches=1;indels=0;unknowns=0;Target=comp160711_c0_seq1 137 1 .;locus=RLOC_00006863
Chr1	stalkie_big_nohaplotig	exon	30178595	30178731	99	+	.	Parent=comp160711_c0_seq1.mrna1
Chr1	gffcl	locus	30235912	30236299	.	-	.	ID=RLOC_00006864;geneIDs=comp103276_c0_seq1.path1;transcripts=comp103276_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30235912	30236299	.	-	.	ID=comp103276_c0_seq1.mrna1;geneID=comp103276_c0_seq1.path1;Name=comp103276_c0_seq1;Dir=indeterminatecoverage=97.7;identity=98.7;matches=383;mismatches=5;indels=0;unknowns=0;Target=comp103276_c0_seq1 397 10 .;CDS_Target=comp103276_c0_seq1 48 10 .;locus=RLOC_00006864
Chr1	stalkie_big_nohaplotig	exon	30235912	30236299	98	-	.	Parent=comp103276_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30236261	30236299	.	-	0	Parent=comp103276_c0_seq1.mrna1
Chr1	gffcl	locus	30244046	30244838	.	-	.	ID=RLOC_00006865;geneIDs=comp154968_c0_seq1.path1;transcripts=comp154968_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30244046	30244838	.	-	.	ID=comp154968_c0_seq1.mrna1;geneID=comp154968_c0_seq1.path1;Name=comp154968_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.1;matches=753;mismatches=22;indels=52;unknowns=0;Target=comp154968_c0_seq1 809 1 .;CDS_Target=comp154968_c0_seq1 542 483 .;locus=RLOC_00006865
Chr1	stalkie_big_nohaplotig	exon	30244046	30244838	91	-	.	Parent=comp154968_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30244331	30244390	.	-	0	Parent=comp154968_c0_seq1.mrna1
Chr1	gffcl	locus	30246648	30248446	.	+	.	ID=RLOC_00006866;geneIDs=comp163137_c0_seq1.path1;transcripts=comp163137_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30246648	30248446	.	+	.	ID=comp163137_c0_seq1.mrna1;geneID=comp163137_c0_seq1.path1;Name=comp163137_c0_seq1;Dir=indeterminatecoverage=99.0;identity=93.6;matches=1726;mismatches=60;indels=58;unknowns=0;Target=comp163137_c0_seq1 1327 1247 .;locus=RLOC_00006866
Chr1	stalkie_big_nohaplotig	exon	30246648	30247530	92	+	.	Parent=comp163137_c0_seq1.mrna1;Target=comp163137_c0_seq1 941 20 .
Chr1	stalkie_big_nohaplotig	exon	30247543	30248446	94	+	.	Parent=comp163137_c0_seq1.mrna1;Target=comp163137_c0_seq1 2008 1088 .
Chr1	stalkie_big_nohaplotig	CDS	30247702	30247774	.	+	0	Parent=comp163137_c0_seq1.mrna1
Chr1	gffcl	locus	30249089	30249528	.	+	.	ID=RLOC_00006867;geneIDs=comp149615_c0_seq1.path1;transcripts=comp149615_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30249089	30249528	.	+	.	ID=comp149615_c0_seq1.mrna1;geneID=comp149615_c0_seq1.path1;Name=comp149615_c0_seq1;Dir=indeterminatecoverage=99.8;identity=96.7;matches=435;mismatches=5;indels=10;unknowns=0;Target=comp149615_c0_seq1 451 2 .;CDS_Target=comp149615_c0_seq1 48 4 .;locus=RLOC_00006867
Chr1	stalkie_big_nohaplotig	exon	30249089	30249528	96	+	.	Parent=comp149615_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30249091	30249125	.	+	0	Parent=comp149615_c0_seq1.mrna1
Chr1	gffcl	locus	30259234	30259926	.	+	.	ID=RLOC_00006868;geneIDs=comp154234_c0_seq1.path1;transcripts=comp154234_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30259234	30259926	.	+	.	ID=comp154234_c0_seq1.mrna1;geneID=comp154234_c0_seq1.path1;Name=comp154234_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=685;mismatches=8;indels=2;unknowns=0;Target=comp154234_c0_seq1 695 1 .;CDS_Target=comp154234_c0_seq1 126 1 .;locus=RLOC_00006868
Chr1	stalkie_big_nohaplotig	exon	30259234	30259926	98	+	.	Parent=comp154234_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30259234	30259359	.	+	0	Parent=comp154234_c0_seq1.mrna1
Chr1	gffcl	locus	30262958	30263576	.	+	.	ID=RLOC_00006869;geneIDs=comp154701_c0_seq1.path1;transcripts=comp154701_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30262958	30263576	.	+	.	ID=comp154701_c0_seq1.mrna1;geneID=comp154701_c0_seq1.path1;Name=comp154701_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=606;mismatches=13;indels=3;unknowns=0;Target=comp154701_c0_seq1 622 1 .;CDS_Target=comp154701_c0_seq1 124 2 .;locus=RLOC_00006869
Chr1	stalkie_big_nohaplotig	exon	30262958	30263576	97	+	.	Parent=comp154701_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30262959	30263081	.	+	0	Parent=comp154701_c0_seq1.mrna1
Chr1	gffcl	locus	30265479	30266322	.	+	.	ID=RLOC_00006870;geneIDs=comp157416_c0_seq1.path1;transcripts=comp157416_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30265479	30266322	.	+	.	ID=comp157416_c0_seq1.mrna1;geneID=comp157416_c0_seq1.path1;Name=comp157416_c0_seq1;Dir=indeterminatecoverage=92.0;identity=96.7;matches=826;mismatches=10;indels=18;unknowns=0;Target=comp157416_c0_seq1 870 25 .;CDS_Target=comp157416_c0_seq1 460 362 .;locus=RLOC_00006870
Chr1	stalkie_big_nohaplotig	exon	30265479	30266322	96	+	.	Parent=comp157416_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30265821	30265919	.	+	0	Parent=comp157416_c0_seq1.mrna1
Chr1	gffcl	locus	30267797	30268083	.	+	.	ID=RLOC_00006871;geneIDs=comp147921_c0_seq1.path1;transcripts=comp147921_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30267797	30268083	.	+	.	ID=comp147921_c0_seq1.mrna1;geneID=comp147921_c0_seq1.path1;Name=comp147921_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.7;matches=286;mismatches=1;indels=0;unknowns=0;Target=comp147921_c0_seq1 289 3 .;CDS_Target=comp147921_c0_seq1 104 30 .;locus=RLOC_00006871
Chr1	stalkie_big_nohaplotig	exon	30267797	30268083	99	+	.	Parent=comp147921_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30267824	30267898	.	+	0	Parent=comp147921_c0_seq1.mrna1
Chr1	gffcl	locus	30268650	30269538	.	-	.	ID=RLOC_00006872;geneIDs=comp162295_c0_seq1.path1;transcripts=comp162295_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30268650	30269538	.	-	.	ID=comp162295_c0_seq1.mrna1;geneID=comp162295_c0_seq1.path1;Name=comp162295_c0_seq1;Dir=indeterminatecoverage=100.0;identity=84.2;matches=841;mismatches=39;indels=119;unknowns=0;Target=comp162295_c0_seq1 990 1 .;CDS_Target=comp162295_c0_seq1 778 641 .;locus=RLOC_00006872
Chr1	stalkie_big_nohaplotig	exon	30268650	30269538	84	-	.	Parent=comp162295_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30268830	30268967	.	-	0	Parent=comp162295_c0_seq1.mrna1
Chr1	gffcl	locus	30277354	30279106	.	-	.	ID=RLOC_00006873;geneIDs=FBgn0052846.1.path1;transcripts=FBgn0052846.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30277354	30279106	.	-	.	ID=FBgn0052846.1.mrna1;geneID=FBgn0052846.1.path1;Name=FBgn0052846.1;Dir=sensecoverage=100.0;identity=99.8;matches=1156;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006873
Chr1	stalkie_big_nohaplotig	exon	30277354	30278021	99	-	.	Parent=FBgn0052846.1.mrna1;Target=FBgn0052846.1 491 1158 +
Chr1	stalkie_big_nohaplotig	exon	30278081	30278122	100	-	.	Parent=FBgn0052846.1.mrna1;Target=FBgn0052846.1 449 490 +
Chr1	stalkie_big_nohaplotig	exon	30278241	30278315	100	-	.	Parent=FBgn0052846.1.mrna1;Target=FBgn0052846.1 374 448 +
Chr1	stalkie_big_nohaplotig	exon	30278493	30278534	100	-	.	Parent=FBgn0052846.1.mrna1;Target=FBgn0052846.1 332 373 +
Chr1	stalkie_big_nohaplotig	exon	30278596	30278631	100	-	.	Parent=FBgn0052846.1.mrna1;Target=FBgn0052846.1 296 331 +
Chr1	stalkie_big_nohaplotig	exon	30278692	30278730	100	-	.	Parent=FBgn0052846.1.mrna1;Target=FBgn0052846.1 257 295 +
Chr1	stalkie_big_nohaplotig	exon	30278798	30279034	99	-	.	Parent=FBgn0052846.1.mrna1;Target=FBgn0052846.1 20 256 +
Chr1	stalkie_big_nohaplotig	exon	30279088	30279106	100	-	.	Parent=FBgn0052846.1.mrna1;Target=FBgn0052846.1 1 19 +
Chr1	stalkie_big_nohaplotig	CDS	30277354	30278021	.	-	2	Parent=FBgn0052846.1.mrna1;Target=FBgn0052846.1 491 1158 +
Chr1	stalkie_big_nohaplotig	CDS	30278081	30278122	.	-	2	Parent=FBgn0052846.1.mrna1;Target=FBgn0052846.1 449 490 +
Chr1	stalkie_big_nohaplotig	CDS	30278241	30278315	.	-	2	Parent=FBgn0052846.1.mrna1;Target=FBgn0052846.1 374 448 +
Chr1	stalkie_big_nohaplotig	CDS	30278493	30278534	.	-	2	Parent=FBgn0052846.1.mrna1;Target=FBgn0052846.1 332 373 +
Chr1	stalkie_big_nohaplotig	CDS	30278596	30278631	.	-	2	Parent=FBgn0052846.1.mrna1;Target=FBgn0052846.1 296 331 +
Chr1	stalkie_big_nohaplotig	CDS	30278692	30278730	.	-	2	Parent=FBgn0052846.1.mrna1;Target=FBgn0052846.1 257 295 +
Chr1	stalkie_big_nohaplotig	CDS	30278798	30279034	.	-	2	Parent=FBgn0052846.1.mrna1;Target=FBgn0052846.1 20 256 +
Chr1	stalkie_big_nohaplotig	CDS	30279088	30279106	.	-	0	Parent=FBgn0052846.1.mrna1;Target=FBgn0052846.1 1 19 +
Chr1	gffcl	locus	30279628	30282084	.	+	.	ID=RLOC_00006874;geneIDs=comp157678_c0_seq1.path1;transcripts=comp157678_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30279628	30282084	.	+	.	ID=comp157678_c0_seq1.mrna1;geneID=comp157678_c0_seq1.path1;Name=comp157678_c0_seq1;Dir=sensecoverage=100.0;identity=96.9;matches=555;mismatches=14;indels=4;unknowns=0;Target=comp157678_c0_seq1 1 75 +;locus=RLOC_00006874
Chr1	stalkie_big_nohaplotig	exon	30279628	30279735	92	+	.	Parent=comp157678_c0_seq1.mrna1;Target=comp157678_c0_seq1 1 106 +
Chr1	stalkie_big_nohaplotig	exon	30279789	30280229	97	+	.	Parent=comp157678_c0_seq1.mrna1;Target=comp157678_c0_seq1 107 547 +
Chr1	stalkie_big_nohaplotig	exon	30282062	30282084	100	+	.	Parent=comp157678_c0_seq1.mrna1;Target=comp157678_c0_seq1 548 570 +
Chr1	stalkie_big_nohaplotig	CDS	30279628	30279704	.	+	0	Parent=comp157678_c0_seq1.mrna1
Chr1	gffcl	locus	30282155	30293596	.	+	.	ID=RLOC_00006875;geneIDs=FBgn0262593.path1;transcripts=FBgn0262593.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30282155	30293596	.	+	.	ID=FBgn0262593.mrna1;geneID=FBgn0262593.path1;Name=FBgn0262593;Dir=sensecoverage=100.0;identity=99.6;matches=1832;mismatches=7;indels=0;unknowns=0;locus=RLOC_00006875
Chr1	stalkie_big_nohaplotig	exon	30282155	30282175	100	+	.	Parent=FBgn0262593.mrna1;Target=FBgn0262593 1 21 +
Chr1	stalkie_big_nohaplotig	exon	30289068	30290241	99	+	.	Parent=FBgn0262593.mrna1;Target=FBgn0262593 22 1195 +
Chr1	stalkie_big_nohaplotig	exon	30290301	30290494	100	+	.	Parent=FBgn0262593.mrna1;Target=FBgn0262593 1196 1389 +
Chr1	stalkie_big_nohaplotig	exon	30290545	30290827	100	+	.	Parent=FBgn0262593.mrna1;Target=FBgn0262593 1390 1672 +
Chr1	stalkie_big_nohaplotig	exon	30293430	30293596	99	+	.	Parent=FBgn0262593.mrna1;Target=FBgn0262593 1673 1839 +
Chr1	stalkie_big_nohaplotig	CDS	30282155	30282175	.	+	0	Parent=FBgn0262593.mrna1;Target=FBgn0262593 1 21 +
Chr1	stalkie_big_nohaplotig	CDS	30289068	30290241	.	+	0	Parent=FBgn0262593.mrna1;Target=FBgn0262593 22 1195 +
Chr1	stalkie_big_nohaplotig	CDS	30290301	30290494	.	+	2	Parent=FBgn0262593.mrna1;Target=FBgn0262593 1196 1389 +
Chr1	stalkie_big_nohaplotig	CDS	30290545	30290827	.	+	0	Parent=FBgn0262593.mrna1;Target=FBgn0262593 1390 1672 +
Chr1	stalkie_big_nohaplotig	CDS	30293430	30293596	.	+	2	Parent=FBgn0262593.mrna1;Target=FBgn0262593 1673 1839 +
Chr1	gffcl	locus	30294723	30295956	.	+	.	ID=RLOC_00006876;geneIDs=comp157293_c0_seq1.path1;transcripts=comp157293_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30294723	30295956	.	+	.	ID=comp157293_c0_seq1.mrna1;geneID=comp157293_c0_seq1.path1;Name=comp157293_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.0;matches=1180;mismatches=43;indels=46;unknowns=0;Target=comp157293_c0_seq1 1258 1 .;CDS_Target=comp157293_c0_seq1 583 497 .;locus=RLOC_00006876
Chr1	stalkie_big_nohaplotig	exon	30294723	30295956	92	+	.	Parent=comp157293_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30295218	30295304	.	+	0	Parent=comp157293_c0_seq1.mrna1
Chr1	gffcl	locus	30299622	30300806	.	.	.	ID=RLOC_00006877;geneIDs=comp112604_c0_seq1.path1,comp115832_c0_seq1.path1,comp147175_c0_seq1.path1;transcripts=comp112604_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30300175	30300806	.	-	.	ID=comp112604_c0_seq1.mrna1;geneID=comp112604_c0_seq1.path1;Name=comp112604_c0_seq1;Dir=indeterminatecoverage=99.2;identity=89.1;matches=565;mismatches=67;indels=2;unknowns=0;Target=comp112604_c0_seq1 636 3 .;CDS_Target=comp112604_c0_seq1 166 5 .;locus=RLOC_00006877
Chr1	stalkie_big_nohaplotig	exon	30300175	30300806	89	-	.	Parent=comp112604_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30300643	30300804	.	-	0	Parent=comp112604_c0_seq1.mrna1
Chr1	gffcl	locus	30372842	30375134	.	+	.	ID=RLOC_00006878;geneIDs=FBgn0036568.1.path1;transcripts=FBgn0036568.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30372842	30375134	.	+	.	ID=FBgn0036568.1.mrna1;geneID=FBgn0036568.1.path1;Name=FBgn0036568.1;Dir=sensecoverage=100.0;identity=99.9;matches=1780;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006878
Chr1	stalkie_big_nohaplotig	exon	30372842	30372896	100	+	.	Parent=FBgn0036568.1.mrna1;Target=FBgn0036568.1 1 55 +
Chr1	stalkie_big_nohaplotig	exon	30372977	30373096	100	+	.	Parent=FBgn0036568.1.mrna1;Target=FBgn0036568.1 56 175 +
Chr1	stalkie_big_nohaplotig	exon	30373226	30373542	100	+	.	Parent=FBgn0036568.1.mrna1;Target=FBgn0036568.1 176 492 +
Chr1	stalkie_big_nohaplotig	exon	30373631	30373900	99	+	.	Parent=FBgn0036568.1.mrna1;Target=FBgn0036568.1 493 762 +
Chr1	stalkie_big_nohaplotig	exon	30373953	30374406	100	+	.	Parent=FBgn0036568.1.mrna1;Target=FBgn0036568.1 763 1216 +
Chr1	stalkie_big_nohaplotig	exon	30374466	30374752	99	+	.	Parent=FBgn0036568.1.mrna1;Target=FBgn0036568.1 1217 1503 +
Chr1	stalkie_big_nohaplotig	exon	30374856	30375134	100	+	.	Parent=FBgn0036568.1.mrna1;Target=FBgn0036568.1 1504 1782 +
Chr1	stalkie_big_nohaplotig	CDS	30372842	30372896	.	+	0	Parent=FBgn0036568.1.mrna1;Target=FBgn0036568.1 1 55 +
Chr1	stalkie_big_nohaplotig	CDS	30372977	30373096	.	+	2	Parent=FBgn0036568.1.mrna1;Target=FBgn0036568.1 56 175 +
Chr1	stalkie_big_nohaplotig	CDS	30373226	30373542	.	+	2	Parent=FBgn0036568.1.mrna1;Target=FBgn0036568.1 176 492 +
Chr1	stalkie_big_nohaplotig	CDS	30373631	30373900	.	+	0	Parent=FBgn0036568.1.mrna1;Target=FBgn0036568.1 493 762 +
Chr1	stalkie_big_nohaplotig	CDS	30373953	30374406	.	+	0	Parent=FBgn0036568.1.mrna1;Target=FBgn0036568.1 763 1216 +
Chr1	stalkie_big_nohaplotig	CDS	30374466	30374752	.	+	2	Parent=FBgn0036568.1.mrna1;Target=FBgn0036568.1 1217 1503 +
Chr1	stalkie_big_nohaplotig	CDS	30374856	30375134	.	+	0	Parent=FBgn0036568.1.mrna1;Target=FBgn0036568.1 1504 1782 +
Chr1	gffcl	locus	30393116	30394752	.	-	.	ID=RLOC_00006879;geneIDs=comp155547_c0_seq1.path1;transcripts=comp155547_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30393116	30394752	.	-	.	ID=comp155547_c0_seq1.mrna1;geneID=comp155547_c0_seq1.path1;Name=comp155547_c0_seq1;Dir=sensecoverage=99.5;identity=87.7;matches=708;mismatches=21;indels=78;unknowns=0;locus=RLOC_00006879
Chr1	stalkie_big_nohaplotig	exon	30393116	30393344	71	-	.	Parent=comp155547_c0_seq1.mrna1;Target=comp155547_c0_seq1 504 809 +
Chr1	stalkie_big_nohaplotig	exon	30394197	30394299	94	-	.	Parent=comp155547_c0_seq1.mrna1;Target=comp155547_c0_seq1 400 503 +
Chr1	stalkie_big_nohaplotig	exon	30394356	30394752	98	-	.	Parent=comp155547_c0_seq1.mrna1;Target=comp155547_c0_seq1 3 399 +
Chr1	stalkie_big_nohaplotig	CDS	30394276	30394299	.	-	0	Parent=comp155547_c0_seq1.mrna1;Target=comp155547_c0_seq1 400 423 +
Chr1	stalkie_big_nohaplotig	CDS	30394356	30394685	.	-	0	Parent=comp155547_c0_seq1.mrna1;Target=comp155547_c0_seq1 70 399 +
Chr1	gffcl	locus	30447978	30448814	.	-	.	ID=RLOC_00006880;geneIDs=comp143884_c0_seq1.path1;transcripts=comp143884_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30447978	30448814	.	-	.	ID=comp143884_c0_seq1.mrna1;geneID=comp143884_c0_seq1.path1;Name=comp143884_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.4;matches=835;mismatches=2;indels=3;unknowns=0;Target=comp143884_c0_seq1 841 2 .;CDS_Target=comp143884_c0_seq1 764 609 .;locus=RLOC_00006880
Chr1	stalkie_big_nohaplotig	exon	30447978	30448814	99	-	.	Parent=comp143884_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30448055	30448209	.	-	0	Parent=comp143884_c0_seq1.mrna1
Chr1	gffcl	locus	30476697	30476742	.	-	.	ID=RLOC_00006881;geneIDs=FBgn0035981.1.path1;transcripts=FBgn0035981.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30476697	30476742	.	-	.	ID=FBgn0035981.1.mrna1;geneID=FBgn0035981.1.path1;Name=FBgn0035981.1;Dir=indeterminatecoverage=4.0;identity=100.0;matches=46;mismatches=0;indels=0;unknowns=0;Target=FBgn0035981.1 46 1 .;locus=RLOC_00006881
Chr1	stalkie_big_nohaplotig	exon	30476697	30476742	100	-	.	Parent=FBgn0035981.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30476697	30476742	.	-	0	Parent=FBgn0035981.1.mrna1
Chr1	gffcl	locus	30478776	30485346	.	+	.	ID=RLOC_00006882;geneIDs=FBgn0004379.1.path1;transcripts=FBgn0004379.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30478776	30485346	.	+	.	ID=FBgn0004379.1.mrna1;geneID=FBgn0004379.1.path1;Name=FBgn0004379.1;Dir=sensecoverage=99.9;identity=99.8;matches=2465;mismatches=5;indels=0;unknowns=0;locus=RLOC_00006882
Chr1	stalkie_big_nohaplotig	exon	30478776	30479078	100	+	.	Parent=FBgn0004379.1.mrna1;Target=FBgn0004379.1 3 305 +
Chr1	stalkie_big_nohaplotig	exon	30479141	30479849	99	+	.	Parent=FBgn0004379.1.mrna1;Target=FBgn0004379.1 306 1014 +
Chr1	stalkie_big_nohaplotig	exon	30479916	30480293	100	+	.	Parent=FBgn0004379.1.mrna1;Target=FBgn0004379.1 1015 1392 +
Chr1	stalkie_big_nohaplotig	exon	30484134	30484977	99	+	.	Parent=FBgn0004379.1.mrna1;Target=FBgn0004379.1 1393 2236 +
Chr1	stalkie_big_nohaplotig	exon	30485041	30485166	100	+	.	Parent=FBgn0004379.1.mrna1;Target=FBgn0004379.1 2237 2362 +
Chr1	stalkie_big_nohaplotig	exon	30485237	30485346	100	+	.	Parent=FBgn0004379.1.mrna1;Target=FBgn0004379.1 2363 2472 +
Chr1	stalkie_big_nohaplotig	CDS	30478777	30479078	.	+	0	Parent=FBgn0004379.1.mrna1;Target=FBgn0004379.1 4 305 +
Chr1	stalkie_big_nohaplotig	CDS	30479141	30479849	.	+	1	Parent=FBgn0004379.1.mrna1;Target=FBgn0004379.1 306 1014 +
Chr1	stalkie_big_nohaplotig	CDS	30479916	30480293	.	+	0	Parent=FBgn0004379.1.mrna1;Target=FBgn0004379.1 1015 1392 +
Chr1	stalkie_big_nohaplotig	CDS	30484134	30484977	.	+	0	Parent=FBgn0004379.1.mrna1;Target=FBgn0004379.1 1393 2236 +
Chr1	stalkie_big_nohaplotig	CDS	30485041	30485166	.	+	2	Parent=FBgn0004379.1.mrna1;Target=FBgn0004379.1 2237 2362 +
Chr1	stalkie_big_nohaplotig	CDS	30485237	30485346	.	+	2	Parent=FBgn0004379.1.mrna1;Target=FBgn0004379.1 2363 2472 +
Chr1	gffcl	locus	30481660	30482478	.	-	.	ID=RLOC_00006883;geneIDs=FBgn0035980.1.path1;transcripts=FBgn0035980.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30481660	30482478	.	-	.	ID=FBgn0035980.1.mrna1;geneID=FBgn0035980.1.path1;Name=FBgn0035980.1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=808;mismatches=11;indels=0;unknowns=0;Target=FBgn0035980.1 819 1 .;CDS_Target=FBgn0035980.1 819 40 .;locus=RLOC_00006883
Chr1	stalkie_big_nohaplotig	exon	30481660	30482478	98	-	.	Parent=FBgn0035980.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30481660	30482439	.	-	0	Parent=FBgn0035980.1.mrna1
Chr1	gffcl	locus	30488582	30489749	.	-	.	ID=RLOC_00006884;geneIDs=FBgn0085484.1.path1;transcripts=FBgn0085484.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30488582	30489749	.	-	.	ID=FBgn0085484.1.mrna1;geneID=FBgn0085484.1.path1;Name=FBgn0085484.1;Dir=sensecoverage=100.0;identity=99.5;matches=922;mismatches=5;indels=0;unknowns=0;locus=RLOC_00006884
Chr1	stalkie_big_nohaplotig	exon	30488582	30489150	99	-	.	Parent=FBgn0085484.1.mrna1;Target=FBgn0085484.1 359 927 +
Chr1	stalkie_big_nohaplotig	exon	30489264	30489410	100	-	.	Parent=FBgn0085484.1.mrna1;Target=FBgn0085484.1 212 358 +
Chr1	stalkie_big_nohaplotig	exon	30489480	30489579	100	-	.	Parent=FBgn0085484.1.mrna1;Target=FBgn0085484.1 112 211 +
Chr1	stalkie_big_nohaplotig	exon	30489639	30489749	100	-	.	Parent=FBgn0085484.1.mrna1;Target=FBgn0085484.1 1 111 +
Chr1	stalkie_big_nohaplotig	CDS	30488582	30489150	.	-	2	Parent=FBgn0085484.1.mrna1;Target=FBgn0085484.1 359 927 +
Chr1	stalkie_big_nohaplotig	CDS	30489264	30489410	.	-	2	Parent=FBgn0085484.1.mrna1;Target=FBgn0085484.1 212 358 +
Chr1	stalkie_big_nohaplotig	CDS	30489480	30489579	.	-	0	Parent=FBgn0085484.1.mrna1;Target=FBgn0085484.1 112 211 +
Chr1	stalkie_big_nohaplotig	CDS	30489639	30489749	.	-	0	Parent=FBgn0085484.1.mrna1;Target=FBgn0085484.1 1 111 +
Chr1	gffcl	locus	30491711	30492774	.	+	.	ID=RLOC_00006885;geneIDs=FBgn0035374.1.path1;transcripts=FBgn0035374.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30491711	30492774	.	+	.	ID=FBgn0035374.1.mrna1;geneID=FBgn0035374.1.path1;Name=FBgn0035374.1;Dir=sensecoverage=100.0;identity=98.7;matches=992;mismatches=13;indels=0;unknowns=0;locus=RLOC_00006885
Chr1	stalkie_big_nohaplotig	exon	30491711	30491849	98	+	.	Parent=FBgn0035374.1.mrna1;Target=FBgn0035374.1 1 139 +
Chr1	stalkie_big_nohaplotig	exon	30491909	30492774	98	+	.	Parent=FBgn0035374.1.mrna1;Target=FBgn0035374.1 140 1005 +
Chr1	stalkie_big_nohaplotig	CDS	30491711	30491849	.	+	0	Parent=FBgn0035374.1.mrna1;Target=FBgn0035374.1 1 139 +
Chr1	stalkie_big_nohaplotig	CDS	30491909	30492774	.	+	2	Parent=FBgn0035374.1.mrna1;Target=FBgn0035374.1 140 1005 +
Chr1	gffcl	locus	30504522	30508871	.	+	.	ID=RLOC_00006886;geneIDs=FBgn0035375.1.path1;transcripts=FBgn0035375.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30504522	30508871	.	+	.	ID=FBgn0035375.1.mrna1;geneID=FBgn0035375.1.path1;Name=FBgn0035375.1;Dir=sensecoverage=100.0;identity=99.8;matches=1734;mismatches=2;indels=1;unknowns=0;Target=FBgn0035375.1 3 29 +;locus=RLOC_00006886
Chr1	stalkie_big_nohaplotig	exon	30504522	30504825	99	+	.	Parent=FBgn0035375.1.mrna1;Target=FBgn0035375.1 1 305 +
Chr1	stalkie_big_nohaplotig	exon	30504888	30505057	100	+	.	Parent=FBgn0035375.1.mrna1;Target=FBgn0035375.1 306 475 +
Chr1	stalkie_big_nohaplotig	exon	30507552	30508147	99	+	.	Parent=FBgn0035375.1.mrna1;Target=FBgn0035375.1 476 1071 +
Chr1	stalkie_big_nohaplotig	exon	30508206	30508871	99	+	.	Parent=FBgn0035375.1.mrna1;Target=FBgn0035375.1 1072 1737 +
Chr1	stalkie_big_nohaplotig	CDS	30504524	30504549	.	+	0	Parent=FBgn0035375.1.mrna1
Chr1	gffcl	locus	30517277	30517747	.	-	.	ID=RLOC_00006887;geneIDs=comp147969_c0_seq1.path1;transcripts=comp147969_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30517277	30517747	.	-	.	ID=comp147969_c0_seq1.mrna1;geneID=comp147969_c0_seq1.path1;Name=comp147969_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.5;matches=466;mismatches=5;indels=7;unknowns=0;Target=comp147969_c0_seq1 478 1 .;CDS_Target=comp147969_c0_seq1 437 312 .;locus=RLOC_00006887
Chr1	stalkie_big_nohaplotig	exon	30517277	30517747	97	-	.	Parent=comp147969_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30517318	30517443	.	-	0	Parent=comp147969_c0_seq1.mrna1
Chr1	gffcl	locus	30588941	30589648	.	+	.	ID=RLOC_00006889;geneIDs=FBgn0035589.1.path1;transcripts=FBgn0035589.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30588941	30589648	.	+	.	ID=FBgn0035589.1.mrna1;geneID=FBgn0035589.1.path1;Name=FBgn0035589.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=702;mismatches=6;indels=0;unknowns=0;Target=FBgn0035589.1 708 1 .;locus=RLOC_00006889
Chr1	stalkie_big_nohaplotig	exon	30588941	30589648	99	+	.	Parent=FBgn0035589.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30588941	30589648	.	+	0	Parent=FBgn0035589.1.mrna1
Chr1	gffcl	locus	30589841	30591162	.	-	.	ID=RLOC_00006890;geneIDs=FBgn0035588.1.path1;transcripts=FBgn0035588.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30589841	30591162	.	-	.	ID=FBgn0035588.1.mrna1;geneID=FBgn0035588.1.path1;Name=FBgn0035588.1;Dir=sensecoverage=100.0;identity=99.7;matches=927;mismatches=3;indels=0;unknowns=0;locus=RLOC_00006890
Chr1	stalkie_big_nohaplotig	exon	30589841	30590008	99	-	.	Parent=FBgn0035588.1.mrna1;Target=FBgn0035588.1 763 930 +
Chr1	stalkie_big_nohaplotig	exon	30590066	30590200	100	-	.	Parent=FBgn0035588.1.mrna1;Target=FBgn0035588.1 628 762 +
Chr1	stalkie_big_nohaplotig	exon	30590478	30590880	100	-	.	Parent=FBgn0035588.1.mrna1;Target=FBgn0035588.1 225 627 +
Chr1	stalkie_big_nohaplotig	exon	30590939	30591162	99	-	.	Parent=FBgn0035588.1.mrna1;Target=FBgn0035588.1 1 224 +
Chr1	stalkie_big_nohaplotig	CDS	30589841	30590008	.	-	0	Parent=FBgn0035588.1.mrna1;Target=FBgn0035588.1 763 930 +
Chr1	stalkie_big_nohaplotig	CDS	30590066	30590200	.	-	0	Parent=FBgn0035588.1.mrna1;Target=FBgn0035588.1 628 762 +
Chr1	stalkie_big_nohaplotig	CDS	30590478	30590880	.	-	1	Parent=FBgn0035588.1.mrna1;Target=FBgn0035588.1 225 627 +
Chr1	stalkie_big_nohaplotig	CDS	30590939	30591162	.	-	0	Parent=FBgn0035588.1.mrna1;Target=FBgn0035588.1 1 224 +
Chr1	gffcl	locus	30595568	30601731	.	+	.	ID=RLOC_00006891;geneIDs=FBgn0035587.1.path1;transcripts=FBgn0035587.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30595568	30601731	.	+	.	ID=FBgn0035587.1.mrna1;geneID=FBgn0035587.1.path1;Name=FBgn0035587.1;Dir=sensecoverage=100.0;identity=99.2;matches=1021;mismatches=8;indels=0;unknowns=0;locus=RLOC_00006891
Chr1	stalkie_big_nohaplotig	exon	30595568	30595732	98	+	.	Parent=FBgn0035587.1.mrna1;Target=FBgn0035587.1 1 165 +
Chr1	stalkie_big_nohaplotig	exon	30600539	30600731	98	+	.	Parent=FBgn0035587.1.mrna1;Target=FBgn0035587.1 166 358 +
Chr1	stalkie_big_nohaplotig	exon	30600794	30600976	99	+	.	Parent=FBgn0035587.1.mrna1;Target=FBgn0035587.1 359 541 +
Chr1	stalkie_big_nohaplotig	exon	30601244	30601731	99	+	.	Parent=FBgn0035587.1.mrna1;Target=FBgn0035587.1 542 1029 +
Chr1	stalkie_big_nohaplotig	CDS	30595568	30595732	.	+	0	Parent=FBgn0035587.1.mrna1;Target=FBgn0035587.1 1 165 +
Chr1	stalkie_big_nohaplotig	CDS	30600539	30600731	.	+	0	Parent=FBgn0035587.1.mrna1;Target=FBgn0035587.1 166 358 +
Chr1	stalkie_big_nohaplotig	CDS	30600794	30600976	.	+	2	Parent=FBgn0035587.1.mrna1;Target=FBgn0035587.1 359 541 +
Chr1	stalkie_big_nohaplotig	CDS	30601244	30601731	.	+	2	Parent=FBgn0035587.1.mrna1;Target=FBgn0035587.1 542 1029 +
Chr1	gffcl	locus	30602067	30603324	.	-	.	ID=RLOC_00006892;geneIDs=FBgn0035586.1.path1;transcripts=FBgn0035586.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30602067	30603324	.	-	.	ID=FBgn0035586.1.mrna1;geneID=FBgn0035586.1.path1;Name=FBgn0035586.1;Dir=sensecoverage=100.0;identity=99.7;matches=1199;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006892
Chr1	stalkie_big_nohaplotig	exon	30602067	30602746	99	-	.	Parent=FBgn0035586.1.mrna1;Target=FBgn0035586.1 524 1203 +
Chr1	stalkie_big_nohaplotig	exon	30602802	30603324	100	-	.	Parent=FBgn0035586.1.mrna1;Target=FBgn0035586.1 1 523 +
Chr1	stalkie_big_nohaplotig	CDS	30602067	30602746	.	-	2	Parent=FBgn0035586.1.mrna1;Target=FBgn0035586.1 524 1203 +
Chr1	stalkie_big_nohaplotig	CDS	30602802	30603324	.	-	0	Parent=FBgn0035586.1.mrna1;Target=FBgn0035586.1 1 523 +
Chr1	gffcl	locus	30611258	30615767	.	-	.	ID=RLOC_00006894;geneIDs=FBgn0036258.1.path1;transcripts=FBgn0036258.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30611258	30615767	.	-	.	ID=FBgn0036258.1.mrna1;geneID=FBgn0036258.1.path1;Name=FBgn0036258.1;Dir=sensecoverage=100.0;identity=99.9;matches=1694;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006894
Chr1	stalkie_big_nohaplotig	exon	30611258	30611389	100	-	.	Parent=FBgn0036258.1.mrna1;Target=FBgn0036258.1 1564 1695 +
Chr1	stalkie_big_nohaplotig	exon	30613841	30614813	100	-	.	Parent=FBgn0036258.1.mrna1;Target=FBgn0036258.1 591 1563 +
Chr1	stalkie_big_nohaplotig	exon	30615019	30615497	99	-	.	Parent=FBgn0036258.1.mrna1;Target=FBgn0036258.1 112 590 +
Chr1	stalkie_big_nohaplotig	exon	30615657	30615767	100	-	.	Parent=FBgn0036258.1.mrna1;Target=FBgn0036258.1 1 111 +
Chr1	stalkie_big_nohaplotig	CDS	30611258	30611389	.	-	0	Parent=FBgn0036258.1.mrna1;Target=FBgn0036258.1 1564 1695 +
Chr1	stalkie_big_nohaplotig	CDS	30613841	30614813	.	-	1	Parent=FBgn0036258.1.mrna1;Target=FBgn0036258.1 591 1563 +
Chr1	stalkie_big_nohaplotig	CDS	30615019	30615497	.	-	0	Parent=FBgn0036258.1.mrna1;Target=FBgn0036258.1 112 590 +
Chr1	stalkie_big_nohaplotig	CDS	30615657	30615767	.	-	0	Parent=FBgn0036258.1.mrna1;Target=FBgn0036258.1 1 111 +
Chr1	gffcl	locus	30615956	30618949	.	+	.	ID=RLOC_00006895;geneIDs=FBgn0011455.1.path1;transcripts=FBgn0011455.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30615956	30618949	.	+	.	ID=FBgn0011455.1.mrna1;geneID=FBgn0011455.1.path1;Name=FBgn0011455.1;Dir=sensecoverage=100.0;identity=99.3;matches=569;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006895
Chr1	stalkie_big_nohaplotig	exon	30615956	30616058	97	+	.	Parent=FBgn0011455.1.mrna1;Target=FBgn0011455.1 1 103 +
Chr1	stalkie_big_nohaplotig	exon	30616182	30616408	100	+	.	Parent=FBgn0011455.1.mrna1;Target=FBgn0011455.1 104 330 +
Chr1	stalkie_big_nohaplotig	exon	30616466	30616572	99	+	.	Parent=FBgn0011455.1.mrna1;Target=FBgn0011455.1 331 437 +
Chr1	stalkie_big_nohaplotig	exon	30618814	30618949	100	+	.	Parent=FBgn0011455.1.mrna1;Target=FBgn0011455.1 438 573 +
Chr1	stalkie_big_nohaplotig	CDS	30615956	30616058	.	+	0	Parent=FBgn0011455.1.mrna1;Target=FBgn0011455.1 1 103 +
Chr1	stalkie_big_nohaplotig	CDS	30616182	30616408	.	+	2	Parent=FBgn0011455.1.mrna1;Target=FBgn0011455.1 104 330 +
Chr1	stalkie_big_nohaplotig	CDS	30616466	30616572	.	+	0	Parent=FBgn0011455.1.mrna1;Target=FBgn0011455.1 331 437 +
Chr1	stalkie_big_nohaplotig	CDS	30618814	30618949	.	+	1	Parent=FBgn0011455.1.mrna1;Target=FBgn0011455.1 438 573 +
Chr1	gffcl	locus	30616549	30617242	.	-	.	ID=RLOC_00006896;geneIDs=comp149739_c0_seq1.path1;transcripts=comp149739_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30616549	30617242	.	-	.	ID=comp149739_c0_seq1.mrna1;geneID=comp149739_c0_seq1.path1;Name=comp149739_c0_seq1;Dir=antisensecoverage=100.0;identity=92.3;matches=446;mismatches=18;indels=19;unknowns=0;Target=comp149739_c0_seq1 437 469 .;locus=RLOC_00006896
Chr1	stalkie_big_nohaplotig	exon	30616549	30616786	92	-	.	Parent=comp149739_c0_seq1.mrna1;Target=comp149739_c0_seq1 1 231 -
Chr1	stalkie_big_nohaplotig	exon	30617005	30617242	91	-	.	Parent=comp149739_c0_seq1.mrna1;Target=comp149739_c0_seq1 232 471 -
Chr1	stalkie_big_nohaplotig	CDS	30617208	30617240	.	-	0	Parent=comp149739_c0_seq1.mrna1
Chr1	gffcl	locus	30617391	30618668	.	-	.	ID=RLOC_00006897;geneIDs=comp152700_c0_seq1.path1,comp153687_c0_seq1.path1;transcripts=comp153687_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30617391	30618131	.	-	.	ID=comp153687_c0_seq1.mrna1;geneID=comp153687_c0_seq1.path1;Name=comp153687_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.0;matches=713;mismatches=21;indels=9;unknowns=0;Target=comp153687_c0_seq1 736 1 .;CDS_Target=comp153687_c0_seq1 557 435 .;locus=RLOC_00006897
Chr1	stalkie_big_nohaplotig	exon	30617391	30618131	95	-	.	Parent=comp153687_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30617568	30617697	.	-	0	Parent=comp153687_c0_seq1.mrna1
Chr1	gffcl	locus	30619134	30619572	.	-	.	ID=RLOC_00006898;geneIDs=FBgn0036255.1.path1;transcripts=FBgn0036255.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30619134	30619572	.	-	.	ID=FBgn0036255.1.mrna1;geneID=FBgn0036255.1.path1;Name=FBgn0036255.1;Dir=sensecoverage=100.0;identity=99.1;matches=318;mismatches=3;indels=0;unknowns=0;locus=RLOC_00006898
Chr1	stalkie_big_nohaplotig	exon	30619134	30619253	99	-	.	Parent=FBgn0036255.1.mrna1;Target=FBgn0036255.1 202 321 +
Chr1	stalkie_big_nohaplotig	exon	30619321	30619457	99	-	.	Parent=FBgn0036255.1.mrna1;Target=FBgn0036255.1 65 201 +
Chr1	stalkie_big_nohaplotig	exon	30619509	30619572	98	-	.	Parent=FBgn0036255.1.mrna1;Target=FBgn0036255.1 1 64 +
Chr1	stalkie_big_nohaplotig	CDS	30619134	30619253	.	-	0	Parent=FBgn0036255.1.mrna1;Target=FBgn0036255.1 202 321 +
Chr1	stalkie_big_nohaplotig	CDS	30619321	30619457	.	-	2	Parent=FBgn0036255.1.mrna1;Target=FBgn0036255.1 65 201 +
Chr1	stalkie_big_nohaplotig	CDS	30619509	30619572	.	-	0	Parent=FBgn0036255.1.mrna1;Target=FBgn0036255.1 1 64 +
Chr1	gffcl	locus	30619772	30622499	.	+	.	ID=RLOC_00006899;geneIDs=FBgn0036254.1.path1;transcripts=FBgn0036254.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30619772	30622499	.	+	.	ID=FBgn0036254.1.mrna1;geneID=FBgn0036254.1.path1;Name=FBgn0036254.1;Dir=sensecoverage=99.9;identity=98.8;matches=2386;mismatches=21;indels=9;unknowns=0;locus=RLOC_00006899
Chr1	stalkie_big_nohaplotig	exon	30619772	30619910	100	+	.	Parent=FBgn0036254.1.mrna1;Target=FBgn0036254.1 1 139 +
Chr1	stalkie_big_nohaplotig	exon	30619962	30620246	98	+	.	Parent=FBgn0036254.1.mrna1;Target=FBgn0036254.1 140 424 +
Chr1	stalkie_big_nohaplotig	exon	30620337	30620664	95	+	.	Parent=FBgn0036254.1.mrna1;Target=FBgn0036254.1 425 761 +
Chr1	stalkie_big_nohaplotig	exon	30620731	30621589	99	+	.	Parent=FBgn0036254.1.mrna1;Target=FBgn0036254.1 762 1620 +
Chr1	stalkie_big_nohaplotig	exon	30621647	30621810	100	+	.	Parent=FBgn0036254.1.mrna1;Target=FBgn0036254.1 1621 1784 +
Chr1	stalkie_big_nohaplotig	exon	30621868	30622499	98	+	.	Parent=FBgn0036254.1.mrna1;Target=FBgn0036254.1 1785 2416 +
Chr1	stalkie_big_nohaplotig	CDS	30619772	30619910	.	+	0	Parent=FBgn0036254.1.mrna1;Target=FBgn0036254.1 1 139 +
Chr1	stalkie_big_nohaplotig	CDS	30619962	30620246	.	+	2	Parent=FBgn0036254.1.mrna1;Target=FBgn0036254.1 140 424 +
Chr1	stalkie_big_nohaplotig	CDS	30620337	30620664	.	+	2	Parent=FBgn0036254.1.mrna1;Target=FBgn0036254.1 425 761 +
Chr1	stalkie_big_nohaplotig	CDS	30620731	30621589	.	+	1	Parent=FBgn0036254.1.mrna1;Target=FBgn0036254.1 762 1620 +
Chr1	stalkie_big_nohaplotig	CDS	30621647	30621810	.	+	0	Parent=FBgn0036254.1.mrna1;Target=FBgn0036254.1 1621 1784 +
Chr1	stalkie_big_nohaplotig	CDS	30621868	30622498	.	+	1	Parent=FBgn0036254.1.mrna1;Target=FBgn0036254.1 1785 2415 +
Chr1	gffcl	locus	30624982	30628701	.	+	.	ID=RLOC_00006900;geneIDs=FBgn0046296.1.path1;transcripts=FBgn0046296.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30624982	30628701	.	+	.	ID=FBgn0046296.1.mrna1;geneID=FBgn0046296.1.path1;Name=FBgn0046296.1;Dir=sensecoverage=100.0;identity=99.0;matches=1369;mismatches=14;indels=0;unknowns=0;locus=RLOC_00006900
Chr1	stalkie_big_nohaplotig	exon	30624982	30625690	99	+	.	Parent=FBgn0046296.1.mrna1;Target=FBgn0046296.1 1 709 +
Chr1	stalkie_big_nohaplotig	exon	30627951	30628280	98	+	.	Parent=FBgn0046296.1.mrna1;Target=FBgn0046296.1 710 1039 +
Chr1	stalkie_big_nohaplotig	exon	30628358	30628701	98	+	.	Parent=FBgn0046296.1.mrna1;Target=FBgn0046296.1 1040 1383 +
Chr1	stalkie_big_nohaplotig	CDS	30624982	30625690	.	+	0	Parent=FBgn0046296.1.mrna1;Target=FBgn0046296.1 1 709 +
Chr1	stalkie_big_nohaplotig	CDS	30627951	30628280	.	+	2	Parent=FBgn0046296.1.mrna1;Target=FBgn0046296.1 710 1039 +
Chr1	stalkie_big_nohaplotig	CDS	30628358	30628701	.	+	2	Parent=FBgn0046296.1.mrna1;Target=FBgn0046296.1 1040 1383 +
Chr1	gffcl	locus	30637226	30680981	.	-	.	ID=RLOC_00006901;geneIDs=FBgn0261797.1.path1;transcripts=FBgn0261797.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30637226	30680981	.	-	.	ID=FBgn0261797.1.mrna1;geneID=FBgn0261797.1.path1;Name=FBgn0261797.1;Dir=sensecoverage=100.0;identity=99.5;matches=13857;mismatches=75;indels=0;unknowns=0;locus=RLOC_00006901
Chr1	stalkie_big_nohaplotig	exon	30637226	30637388	98	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 13770 13932 +
Chr1	stalkie_big_nohaplotig	exon	30637458	30637726	98	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 13501 13769 +
Chr1	stalkie_big_nohaplotig	exon	30637928	30639009	99	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 12419 13500 +
Chr1	stalkie_big_nohaplotig	exon	30639281	30640133	99	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 11566 12418 +
Chr1	stalkie_big_nohaplotig	exon	30640195	30641240	99	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 10520 11565 +
Chr1	stalkie_big_nohaplotig	exon	30641309	30641660	99	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 10168 10519 +
Chr1	stalkie_big_nohaplotig	exon	30643041	30643158	100	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 10050 10167 +
Chr1	stalkie_big_nohaplotig	exon	30643602	30643800	100	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 9851 10049 +
Chr1	stalkie_big_nohaplotig	exon	30647159	30647883	99	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 9126 9850 +
Chr1	stalkie_big_nohaplotig	exon	30648032	30648687	99	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 8470 9125 +
Chr1	stalkie_big_nohaplotig	exon	30648751	30649290	99	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 7930 8469 +
Chr1	stalkie_big_nohaplotig	exon	30649346	30649533	98	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 7742 7929 +
Chr1	stalkie_big_nohaplotig	exon	30649606	30649979	99	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 7368 7741 +
Chr1	stalkie_big_nohaplotig	exon	30650036	30650820	99	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 6583 7367 +
Chr1	stalkie_big_nohaplotig	exon	30651433	30652485	99	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 5530 6582 +
Chr1	stalkie_big_nohaplotig	exon	30652541	30652663	100	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 5407 5529 +
Chr1	stalkie_big_nohaplotig	exon	30652731	30654120	99	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 4017 5406 +
Chr1	stalkie_big_nohaplotig	exon	30654182	30654746	100	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 3452 4016 +
Chr1	stalkie_big_nohaplotig	exon	30654808	30655408	99	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 2851 3451 +
Chr1	stalkie_big_nohaplotig	exon	30655468	30655791	99	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 2527 2850 +
Chr1	stalkie_big_nohaplotig	exon	30655846	30656001	100	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 2371 2526 +
Chr1	stalkie_big_nohaplotig	exon	30656620	30656725	96	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 2265 2370 +
Chr1	stalkie_big_nohaplotig	exon	30656789	30657192	98	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 1861 2264 +
Chr1	stalkie_big_nohaplotig	exon	30657252	30657451	99	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 1661 1860 +
Chr1	stalkie_big_nohaplotig	exon	30657515	30658249	99	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 926 1660 +
Chr1	stalkie_big_nohaplotig	exon	30679158	30679254	98	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 829 925 +
Chr1	stalkie_big_nohaplotig	exon	30679315	30679889	99	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 254 828 +
Chr1	stalkie_big_nohaplotig	exon	30680729	30680981	99	-	.	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 1 253 +
Chr1	stalkie_big_nohaplotig	CDS	30637226	30637388	.	-	1	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 13770 13932 +
Chr1	stalkie_big_nohaplotig	CDS	30637458	30637726	.	-	0	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 13501 13769 +
Chr1	stalkie_big_nohaplotig	CDS	30637928	30639009	.	-	2	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 12419 13500 +
Chr1	stalkie_big_nohaplotig	CDS	30639281	30640133	.	-	0	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 11566 12418 +
Chr1	stalkie_big_nohaplotig	CDS	30640195	30641240	.	-	2	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 10520 11565 +
Chr1	stalkie_big_nohaplotig	CDS	30641309	30641660	.	-	0	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 10168 10519 +
Chr1	stalkie_big_nohaplotig	CDS	30643041	30643158	.	-	1	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 10050 10167 +
Chr1	stalkie_big_nohaplotig	CDS	30643602	30643800	.	-	2	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 9851 10049 +
Chr1	stalkie_big_nohaplotig	CDS	30647159	30647883	.	-	1	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 9126 9850 +
Chr1	stalkie_big_nohaplotig	CDS	30648032	30648687	.	-	0	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 8470 9125 +
Chr1	stalkie_big_nohaplotig	CDS	30648751	30649290	.	-	0	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 7930 8469 +
Chr1	stalkie_big_nohaplotig	CDS	30649346	30649533	.	-	2	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 7742 7929 +
Chr1	stalkie_big_nohaplotig	CDS	30649606	30649979	.	-	1	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 7368 7741 +
Chr1	stalkie_big_nohaplotig	CDS	30650036	30650820	.	-	0	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 6583 7367 +
Chr1	stalkie_big_nohaplotig	CDS	30651433	30652485	.	-	0	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 5530 6582 +
Chr1	stalkie_big_nohaplotig	CDS	30652541	30652663	.	-	0	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 5407 5529 +
Chr1	stalkie_big_nohaplotig	CDS	30652731	30654120	.	-	1	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 4017 5406 +
Chr1	stalkie_big_nohaplotig	CDS	30654182	30654746	.	-	2	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 3452 4016 +
Chr1	stalkie_big_nohaplotig	CDS	30654808	30655408	.	-	0	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 2851 3451 +
Chr1	stalkie_big_nohaplotig	CDS	30655468	30655791	.	-	0	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 2527 2850 +
Chr1	stalkie_big_nohaplotig	CDS	30655846	30656001	.	-	0	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 2371 2526 +
Chr1	stalkie_big_nohaplotig	CDS	30656620	30656725	.	-	1	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 2265 2370 +
Chr1	stalkie_big_nohaplotig	CDS	30656789	30657192	.	-	0	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 1861 2264 +
Chr1	stalkie_big_nohaplotig	CDS	30657252	30657451	.	-	2	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 1661 1860 +
Chr1	stalkie_big_nohaplotig	CDS	30657515	30658249	.	-	2	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 926 1660 +
Chr1	stalkie_big_nohaplotig	CDS	30679158	30679254	.	-	0	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 829 925 +
Chr1	stalkie_big_nohaplotig	CDS	30679315	30679889	.	-	2	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 254 828 +
Chr1	stalkie_big_nohaplotig	CDS	30680729	30680981	.	-	0	Parent=FBgn0261797.1.mrna1;Target=FBgn0261797.1 1 253 +
Chr1	gffcl	locus	30666430	30685745	.	+	.	ID=RLOC_00006903;geneIDs=FBgn0027085.1.path1;transcripts=FBgn0027085.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30666430	30685745	.	+	.	ID=FBgn0027085.1.mrna1;geneID=FBgn0027085.1.path1;Name=FBgn0027085.1;Dir=sensecoverage=100.0;identity=99.8;matches=2630;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006903
Chr1	stalkie_big_nohaplotig	exon	30666430	30666552	100	+	.	Parent=FBgn0027085.1.mrna1;Target=FBgn0027085.1 1 123 +
Chr1	stalkie_big_nohaplotig	exon	30666612	30667067	100	+	.	Parent=FBgn0027085.1.mrna1;Target=FBgn0027085.1 124 579 +
Chr1	stalkie_big_nohaplotig	exon	30667119	30667863	99	+	.	Parent=FBgn0027085.1.mrna1;Target=FBgn0027085.1 580 1324 +
Chr1	stalkie_big_nohaplotig	exon	30684202	30684587	100	+	.	Parent=FBgn0027085.1.mrna1;Target=FBgn0027085.1 1325 1710 +
Chr1	stalkie_big_nohaplotig	exon	30684648	30684852	99	+	.	Parent=FBgn0027085.1.mrna1;Target=FBgn0027085.1 1711 1915 +
Chr1	stalkie_big_nohaplotig	exon	30684915	30685156	100	+	.	Parent=FBgn0027085.1.mrna1;Target=FBgn0027085.1 1916 2157 +
Chr1	stalkie_big_nohaplotig	exon	30685214	30685447	100	+	.	Parent=FBgn0027085.1.mrna1;Target=FBgn0027085.1 2158 2391 +
Chr1	stalkie_big_nohaplotig	exon	30685503	30685745	99	+	.	Parent=FBgn0027085.1.mrna1;Target=FBgn0027085.1 2392 2634 +
Chr1	stalkie_big_nohaplotig	CDS	30666430	30666552	.	+	0	Parent=FBgn0027085.1.mrna1;Target=FBgn0027085.1 1 123 +
Chr1	stalkie_big_nohaplotig	CDS	30666612	30667067	.	+	0	Parent=FBgn0027085.1.mrna1;Target=FBgn0027085.1 124 579 +
Chr1	stalkie_big_nohaplotig	CDS	30667119	30667863	.	+	0	Parent=FBgn0027085.1.mrna1;Target=FBgn0027085.1 580 1324 +
Chr1	stalkie_big_nohaplotig	CDS	30684202	30684587	.	+	2	Parent=FBgn0027085.1.mrna1;Target=FBgn0027085.1 1325 1710 +
Chr1	stalkie_big_nohaplotig	CDS	30684648	30684852	.	+	0	Parent=FBgn0027085.1.mrna1;Target=FBgn0027085.1 1711 1915 +
Chr1	stalkie_big_nohaplotig	CDS	30684915	30685156	.	+	2	Parent=FBgn0027085.1.mrna1;Target=FBgn0027085.1 1916 2157 +
Chr1	stalkie_big_nohaplotig	CDS	30685214	30685447	.	+	0	Parent=FBgn0027085.1.mrna1;Target=FBgn0027085.1 2158 2391 +
Chr1	stalkie_big_nohaplotig	CDS	30685503	30685745	.	+	0	Parent=FBgn0027085.1.mrna1;Target=FBgn0027085.1 2392 2634 +
Chr1	gffcl	locus	30770592	30771242	.	+	.	ID=RLOC_00006905;geneIDs=comp148566_c0_seq1.path1;transcripts=comp148566_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30770592	30771242	.	+	.	ID=comp148566_c0_seq1.mrna1;geneID=comp148566_c0_seq1.path1;Name=comp148566_c0_seq1;Dir=antisensecoverage=99.8;identity=97.4;matches=554;mismatches=11;indels=4;unknowns=0;locus=RLOC_00006905
Chr1	stalkie_big_nohaplotig	exon	30770592	30770843	98	+	.	Parent=comp148566_c0_seq1.mrna1;Target=comp148566_c0_seq1 314 565 -
Chr1	stalkie_big_nohaplotig	exon	30770926	30771242	96	+	.	Parent=comp148566_c0_seq1.mrna1;Target=comp148566_c0_seq1 1 313 -
Chr1	stalkie_big_nohaplotig	CDS	30770783	30770843	.	+	0	Parent=comp148566_c0_seq1.mrna1;Target=comp148566_c0_seq1 314 374 .
Chr1	stalkie_big_nohaplotig	CDS	30770926	30771092	.	+	2	Parent=comp148566_c0_seq1.mrna1;Target=comp148566_c0_seq1 147 313 .
Chr1	gffcl	locus	30788402	30790859	.	-	.	ID=RLOC_00006906;geneIDs=FBgn0034655.1.path1;transcripts=FBgn0034655.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30788402	30790859	.	-	.	ID=FBgn0034655.1.mrna1;geneID=FBgn0034655.1.path1;Name=FBgn0034655.1;Dir=sensecoverage=100.0;identity=99.2;matches=1018;mismatches=8;indels=0;unknowns=0;locus=RLOC_00006906
Chr1	stalkie_big_nohaplotig	exon	30788402	30788620	99	-	.	Parent=FBgn0034655.1.mrna1;Target=FBgn0034655.1 808 1026 +
Chr1	stalkie_big_nohaplotig	exon	30788694	30789275	99	-	.	Parent=FBgn0034655.1.mrna1;Target=FBgn0034655.1 226 807 +
Chr1	stalkie_big_nohaplotig	exon	30790635	30790859	99	-	.	Parent=FBgn0034655.1.mrna1;Target=FBgn0034655.1 1 225 +
Chr1	stalkie_big_nohaplotig	CDS	30788402	30788620	.	-	0	Parent=FBgn0034655.1.mrna1;Target=FBgn0034655.1 808 1026 +
Chr1	stalkie_big_nohaplotig	CDS	30788694	30789275	.	-	0	Parent=FBgn0034655.1.mrna1;Target=FBgn0034655.1 226 807 +
Chr1	stalkie_big_nohaplotig	CDS	30790635	30790859	.	-	0	Parent=FBgn0034655.1.mrna1;Target=FBgn0034655.1 1 225 +
Chr1	gffcl	locus	30816482	30890805	.	-	.	ID=RLOC_00006907;geneIDs=FBgn0035591.1.path1;transcripts=FBgn0035591.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30816482	30890805	.	-	.	ID=FBgn0035591.1.mrna1;geneID=FBgn0035591.1.path1;Name=FBgn0035591.1;Dir=sensecoverage=97.6;identity=99.5;matches=2115;mismatches=11;indels=0;unknowns=8;locus=RLOC_00006907
Chr1	stalkie_big_nohaplotig	exon	30816482	30816487	100	-	.	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2138 2143 +
Chr1	stalkie_big_nohaplotig	exon	30819961	30819970	100	-	.	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2128 2137 +
Chr1	stalkie_big_nohaplotig	exon	30828062	30828066	100	-	.	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2123 2127 +
Chr1	stalkie_big_nohaplotig	exon	30830464	30830465	100	-	.	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2121 2122 +
Chr1	stalkie_big_nohaplotig	exon	30841745	30841747	100	-	.	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2118 2120 +
Chr1	stalkie_big_nohaplotig	exon	30843281	30843285	100	-	.	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2113 2117 +
Chr1	stalkie_big_nohaplotig	exon	30850495	30850497	100	-	.	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2110 2112 +
Chr1	stalkie_big_nohaplotig	exon	30853661	30853663	100	-	.	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2107 2109 +
Chr1	stalkie_big_nohaplotig	exon	30858267	30858270	100	-	.	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2103 2106 +
Chr1	stalkie_big_nohaplotig	exon	30859706	30859714	88	-	.	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2094 2102 +
Chr1	stalkie_big_nohaplotig	exon	30867156	30867159	100	-	.	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2090 2093 +
Chr1	stalkie_big_nohaplotig	exon	30873678	30873681	100	-	.	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2086 2089 +
Chr1	stalkie_big_nohaplotig	exon	30885952	30885957	100	-	.	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2080 2085 +
Chr1	stalkie_big_nohaplotig	exon	30887312	30887317	100	-	.	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2065 2070 +
Chr1	stalkie_big_nohaplotig	exon	30888312	30888473	98	-	.	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 1903 2064 +
Chr1	stalkie_big_nohaplotig	exon	30888532	30888706	99	-	.	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 1728 1902 +
Chr1	stalkie_big_nohaplotig	exon	30888962	30889726	99	-	.	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 963 1727 +
Chr1	stalkie_big_nohaplotig	exon	30889785	30890340	99	-	.	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 407 962 +
Chr1	stalkie_big_nohaplotig	exon	30890400	30890805	99	-	.	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 1 406 +
Chr1	stalkie_big_nohaplotig	CDS	30816483	30816487	.	-	2	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2138 2142 +
Chr1	stalkie_big_nohaplotig	CDS	30819961	30819970	.	-	0	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2128 2137 +
Chr1	stalkie_big_nohaplotig	CDS	30828062	30828066	.	-	2	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2123 2127 +
Chr1	stalkie_big_nohaplotig	CDS	30830464	30830465	.	-	1	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2121 2122 +
Chr1	stalkie_big_nohaplotig	CDS	30841745	30841747	.	-	1	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2118 2120 +
Chr1	stalkie_big_nohaplotig	CDS	30843281	30843285	.	-	0	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2113 2117 +
Chr1	stalkie_big_nohaplotig	CDS	30850495	30850497	.	-	0	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2110 2112 +
Chr1	stalkie_big_nohaplotig	CDS	30853661	30853663	.	-	0	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2107 2109 +
Chr1	stalkie_big_nohaplotig	CDS	30858267	30858270	.	-	1	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2103 2106 +
Chr1	stalkie_big_nohaplotig	CDS	30859706	30859714	.	-	1	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2094 2102 +
Chr1	stalkie_big_nohaplotig	CDS	30867156	30867159	.	-	2	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2090 2093 +
Chr1	stalkie_big_nohaplotig	CDS	30873678	30873681	.	-	0	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2086 2089 +
Chr1	stalkie_big_nohaplotig	CDS	30885952	30885957	.	-	0	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2080 2085 +
Chr1	stalkie_big_nohaplotig	CDS	30887312	30887317	.	-	0	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 2065 2070 +
Chr1	stalkie_big_nohaplotig	CDS	30888312	30888473	.	-	0	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 1903 2064 +
Chr1	stalkie_big_nohaplotig	CDS	30888532	30888706	.	-	1	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 1728 1902 +
Chr1	stalkie_big_nohaplotig	CDS	30888962	30889726	.	-	1	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 963 1727 +
Chr1	stalkie_big_nohaplotig	CDS	30889785	30890340	.	-	2	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 407 962 +
Chr1	stalkie_big_nohaplotig	CDS	30890400	30890805	.	-	0	Parent=FBgn0035591.1.mrna1;Target=FBgn0035591.1 1 406 +
Chr1	gffcl	locus	30860218	30861390	.	+	.	ID=RLOC_00006908;geneIDs=comp162207_c0_seq1.path1;transcripts=comp162207_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30860218	30861390	.	+	.	ID=comp162207_c0_seq1.mrna1;geneID=comp162207_c0_seq1.path1;Name=comp162207_c0_seq1;Dir=indeterminatecoverage=86.8;identity=97.4;matches=1148;mismatches=25;indels=6;unknowns=0;Target=comp162207_c0_seq1 1179 1 .;CDS_Target=comp162207_c0_seq1 990 886 .;locus=RLOC_00006908
Chr1	stalkie_big_nohaplotig	exon	30860218	30861390	97	+	.	Parent=comp162207_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30861097	30861201	.	+	0	Parent=comp162207_c0_seq1.mrna1
Chr1	gffcl	locus	30862808	30863520	.	-	.	ID=RLOC_00006909;geneIDs=comp146047_c0_seq1.path1;transcripts=comp146047_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30862808	30863520	.	-	.	ID=comp146047_c0_seq1.mrna1;geneID=comp146047_c0_seq1.path1;Name=comp146047_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=709;mismatches=3;indels=3;unknowns=0;Target=comp146047_c0_seq1 714 1 .;CDS_Target=comp146047_c0_seq1 293 114 .;locus=RLOC_00006909
Chr1	stalkie_big_nohaplotig	exon	30862808	30863520	99	-	.	Parent=comp146047_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	30863230	30863407	.	-	0	Parent=comp146047_c0_seq1.mrna1
Chr1	gffcl	locus	30904093	30905234	.	-	.	ID=RLOC_00006911;geneIDs=FBgn0035593.1.path1;transcripts=FBgn0035593.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30904093	30905234	.	-	.	ID=FBgn0035593.1.mrna1;geneID=FBgn0035593.1.path1;Name=FBgn0035593.1;Dir=sensecoverage=100.0;identity=99.9;matches=1070;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006911
Chr1	stalkie_big_nohaplotig	exon	30904093	30904302	100	-	.	Parent=FBgn0035593.1.mrna1;Target=FBgn0035593.1 862 1071 +
Chr1	stalkie_big_nohaplotig	exon	30904374	30905234	99	-	.	Parent=FBgn0035593.1.mrna1;Target=FBgn0035593.1 1 861 +
Chr1	stalkie_big_nohaplotig	CDS	30904093	30904302	.	-	0	Parent=FBgn0035593.1.mrna1;Target=FBgn0035593.1 862 1071 +
Chr1	stalkie_big_nohaplotig	CDS	30904374	30905234	.	-	0	Parent=FBgn0035593.1.mrna1;Target=FBgn0035593.1 1 861 +
Chr1	gffcl	locus	30909889	30910509	.	+	.	ID=RLOC_00006912;geneIDs=comp147653_c0_seq1.path1;transcripts=comp147653_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30909889	30910509	.	+	.	ID=comp147653_c0_seq1.mrna1;geneID=comp147653_c0_seq1.path1;Name=comp147653_c0_seq1;Dir=sensecoverage=98.8;identity=99.6;matches=496;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006912
Chr1	stalkie_big_nohaplotig	exon	30909889	30909979	100	+	.	Parent=comp147653_c0_seq1.mrna1;Target=comp147653_c0_seq1 7 97 +
Chr1	stalkie_big_nohaplotig	exon	30910103	30910509	99	+	.	Parent=comp147653_c0_seq1.mrna1;Target=comp147653_c0_seq1 98 504 +
Chr1	stalkie_big_nohaplotig	CDS	30909962	30909979	.	+	0	Parent=comp147653_c0_seq1.mrna1;Target=comp147653_c0_seq1 80 97 +
Chr1	stalkie_big_nohaplotig	CDS	30910103	30910270	.	+	0	Parent=comp147653_c0_seq1.mrna1;Target=comp147653_c0_seq1 98 265 +
Chr1	gffcl	locus	30914477	30915011	.	-	.	ID=RLOC_00006913;geneIDs=comp155601_c0_seq1.path1;transcripts=comp155601_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	30914477	30915011	.	-	.	ID=comp155601_c0_seq1.mrna1;geneID=comp155601_c0_seq1.path1;Name=comp155601_c0_seq1;Dir=antisensecoverage=100.0;identity=98.8;matches=412;mismatches=5;indels=0;unknowns=0;locus=RLOC_00006913
Chr1	stalkie_big_nohaplotig	exon	30914477	30914821	98	-	.	Parent=comp155601_c0_seq1.mrna1;Target=comp155601_c0_seq1 1 345 -
Chr1	stalkie_big_nohaplotig	exon	30914940	30915011	98	-	.	Parent=comp155601_c0_seq1.mrna1;Target=comp155601_c0_seq1 346 417 -
Chr1	stalkie_big_nohaplotig	CDS	30914666	30914821	.	-	0	Parent=comp155601_c0_seq1.mrna1;Target=comp155601_c0_seq1 190 345 .
Chr1	stalkie_big_nohaplotig	CDS	30914940	30914957	.	-	0	Parent=comp155601_c0_seq1.mrna1;Target=comp155601_c0_seq1 346 363 .
Chr1	gffcl	locus	31009626	31021699	.	-	.	ID=RLOC_00006914;geneIDs=FBgn0035578.1.path1;transcripts=FBgn0035578.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31009626	31021699	.	-	.	ID=FBgn0035578.1.mrna1;geneID=FBgn0035578.1.path1;Name=FBgn0035578.1;Dir=sensecoverage=100.0;identity=99.5;matches=373;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006914
Chr1	stalkie_big_nohaplotig	exon	31009626	31009877	99	-	.	Parent=FBgn0035578.1.mrna1;Target=FBgn0035578.1 124 375 +
Chr1	stalkie_big_nohaplotig	exon	31021577	31021699	99	-	.	Parent=FBgn0035578.1.mrna1;Target=FBgn0035578.1 1 123 +
Chr1	stalkie_big_nohaplotig	CDS	31009626	31009877	.	-	0	Parent=FBgn0035578.1.mrna1;Target=FBgn0035578.1 124 375 +
Chr1	stalkie_big_nohaplotig	CDS	31021577	31021699	.	-	0	Parent=FBgn0035578.1.mrna1;Target=FBgn0035578.1 1 123 +
Chr1	gffcl	locus	31026148	31058393	.	-	.	ID=RLOC_00006915;geneIDs=FBgn0028699.1.path1;transcripts=FBgn0028699.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31026148	31058393	.	-	.	ID=FBgn0028699.1.mrna1;geneID=FBgn0028699.1.path1;Name=FBgn0028699.1;Dir=sensecoverage=100.0;identity=99.7;matches=1501;mismatches=5;indels=0;unknowns=0;locus=RLOC_00006915
Chr1	stalkie_big_nohaplotig	exon	31026148	31026242	98	-	.	Parent=FBgn0028699.1.mrna1;Target=FBgn0028699.1 1412 1506 +
Chr1	stalkie_big_nohaplotig	exon	31026371	31026464	100	-	.	Parent=FBgn0028699.1.mrna1;Target=FBgn0028699.1 1318 1411 +
Chr1	stalkie_big_nohaplotig	exon	31026558	31026776	100	-	.	Parent=FBgn0028699.1.mrna1;Target=FBgn0028699.1 1099 1317 +
Chr1	stalkie_big_nohaplotig	exon	31036022	31036212	100	-	.	Parent=FBgn0028699.1.mrna1;Target=FBgn0028699.1 908 1098 +
Chr1	stalkie_big_nohaplotig	exon	31040960	31041221	100	-	.	Parent=FBgn0028699.1.mrna1;Target=FBgn0028699.1 646 907 +
Chr1	stalkie_big_nohaplotig	exon	31042054	31042219	100	-	.	Parent=FBgn0028699.1.mrna1;Target=FBgn0028699.1 480 645 +
Chr1	stalkie_big_nohaplotig	exon	31045959	31046127	100	-	.	Parent=FBgn0028699.1.mrna1;Target=FBgn0028699.1 311 479 +
Chr1	stalkie_big_nohaplotig	exon	31057312	31057478	98	-	.	Parent=FBgn0028699.1.mrna1;Target=FBgn0028699.1 144 310 +
Chr1	stalkie_big_nohaplotig	exon	31058251	31058393	99	-	.	Parent=FBgn0028699.1.mrna1;Target=FBgn0028699.1 1 143 +
Chr1	stalkie_big_nohaplotig	CDS	31026148	31026242	.	-	2	Parent=FBgn0028699.1.mrna1;Target=FBgn0028699.1 1412 1506 +
Chr1	stalkie_big_nohaplotig	CDS	31026371	31026464	.	-	0	Parent=FBgn0028699.1.mrna1;Target=FBgn0028699.1 1318 1411 +
Chr1	stalkie_big_nohaplotig	CDS	31026558	31026776	.	-	0	Parent=FBgn0028699.1.mrna1;Target=FBgn0028699.1 1099 1317 +
Chr1	stalkie_big_nohaplotig	CDS	31036022	31036212	.	-	2	Parent=FBgn0028699.1.mrna1;Target=FBgn0028699.1 908 1098 +
Chr1	stalkie_big_nohaplotig	CDS	31040960	31041221	.	-	0	Parent=FBgn0028699.1.mrna1;Target=FBgn0028699.1 646 907 +
Chr1	stalkie_big_nohaplotig	CDS	31042054	31042219	.	-	1	Parent=FBgn0028699.1.mrna1;Target=FBgn0028699.1 480 645 +
Chr1	stalkie_big_nohaplotig	CDS	31045959	31046127	.	-	2	Parent=FBgn0028699.1.mrna1;Target=FBgn0028699.1 311 479 +
Chr1	stalkie_big_nohaplotig	CDS	31057312	31057478	.	-	1	Parent=FBgn0028699.1.mrna1;Target=FBgn0028699.1 144 310 +
Chr1	stalkie_big_nohaplotig	CDS	31058251	31058393	.	-	0	Parent=FBgn0028699.1.mrna1;Target=FBgn0028699.1 1 143 +
Chr1	gffcl	locus	31042432	31042852	.	-	.	ID=RLOC_00006916;geneIDs=comp118350_c1_seq1.path1;transcripts=comp118350_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31042432	31042852	.	-	.	ID=comp118350_c1_seq1.mrna1;geneID=comp118350_c1_seq1.path1;Name=comp118350_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=420;mismatches=1;indels=0;unknowns=0;Target=comp118350_c1_seq1 421 1 .;CDS_Target=comp118350_c1_seq1 364 272 .;locus=RLOC_00006916
Chr1	stalkie_big_nohaplotig	exon	31042432	31042852	99	-	.	Parent=comp118350_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	31042489	31042581	.	-	0	Parent=comp118350_c1_seq1.mrna1
Chr1	gffcl	locus	31065187	31072277	.	-	.	ID=RLOC_00006917;geneIDs=comp62612_c0_seq1.path1;transcripts=comp62612_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31065187	31072277	.	-	.	ID=comp62612_c0_seq1.mrna1;geneID=comp62612_c0_seq1.path1;Name=comp62612_c0_seq1;Dir=antisensecoverage=94.1;identity=97.5;matches=612;mismatches=6;indels=10;unknowns=0;locus=RLOC_00006917
Chr1	stalkie_big_nohaplotig	exon	31065187	31065572	96	-	.	Parent=comp62612_c0_seq1.mrna1;Target=comp62612_c0_seq1 25 400 -
Chr1	stalkie_big_nohaplotig	exon	31066200	31066283	100	-	.	Parent=comp62612_c0_seq1.mrna1;Target=comp62612_c0_seq1 401 484 -
Chr1	stalkie_big_nohaplotig	exon	31072120	31072277	99	-	.	Parent=comp62612_c0_seq1.mrna1;Target=comp62612_c0_seq1 485 642 -
Chr1	stalkie_big_nohaplotig	CDS	31065415	31065572	.	-	2	Parent=comp62612_c0_seq1.mrna1;Target=comp62612_c0_seq1 243 400 .
Chr1	stalkie_big_nohaplotig	CDS	31066200	31066283	.	-	2	Parent=comp62612_c0_seq1.mrna1;Target=comp62612_c0_seq1 401 484 .
Chr1	stalkie_big_nohaplotig	CDS	31072120	31072165	.	-	0	Parent=comp62612_c0_seq1.mrna1;Target=comp62612_c0_seq1 485 530 .
Chr1	gffcl	locus	31072476	31072892	.	-	.	ID=RLOC_00006918;geneIDs=comp147442_c0_seq1.path1;transcripts=comp147442_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31072476	31072892	.	-	.	ID=comp147442_c0_seq1.mrna1;geneID=comp147442_c0_seq1.path1;Name=comp147442_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=405;mismatches=12;indels=0;unknowns=0;Target=comp147442_c0_seq1 417 1 .;CDS_Target=comp147442_c0_seq1 336 1 .;locus=RLOC_00006918
Chr1	stalkie_big_nohaplotig	exon	31072476	31072892	97	-	.	Parent=comp147442_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	31072557	31072892	.	-	0	Parent=comp147442_c0_seq1.mrna1
Chr1	gffcl	locus	31087222	31157074	.	-	.	ID=RLOC_00006919;geneIDs=FBgn0035581.1.path1;transcripts=FBgn0035581.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31087222	31157074	.	-	.	ID=FBgn0035581.1.mrna1;geneID=FBgn0035581.1.path1;Name=FBgn0035581.1;Dir=sensecoverage=83.2;identity=99.7;matches=9966;mismatches=28;indels=1;unknowns=80;Target=FBgn0035581.1 29 46 +;locus=RLOC_00006919
Chr1	stalkie_big_nohaplotig	exon	31087222	31087645	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 10816 11239 +
Chr1	stalkie_big_nohaplotig	exon	31090491	31090658	99	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 10648 10815 +
Chr1	stalkie_big_nohaplotig	exon	31091185	31091357	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 10475 10647 +
Chr1	stalkie_big_nohaplotig	exon	31094907	31095041	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 10340 10474 +
Chr1	stalkie_big_nohaplotig	exon	31097636	31097832	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 10143 10339 +
Chr1	stalkie_big_nohaplotig	exon	31097893	31098126	99	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 8769 9002 +
Chr1	stalkie_big_nohaplotig	exon	31100149	31100309	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 8608 8768 +
Chr1	stalkie_big_nohaplotig	exon	31100716	31100841	99	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 8482 8607 +
Chr1	stalkie_big_nohaplotig	exon	31112782	31113013	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 8250 8481 +
Chr1	stalkie_big_nohaplotig	exon	31113072	31113389	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 7932 8249 +
Chr1	stalkie_big_nohaplotig	exon	31116743	31116948	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 7726 7931 +
Chr1	stalkie_big_nohaplotig	exon	31117198	31117380	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 7543 7725 +
Chr1	stalkie_big_nohaplotig	exon	31118686	31118829	98	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 7399 7542 +
Chr1	stalkie_big_nohaplotig	exon	31118912	31118983	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 7327 7398 +
Chr1	stalkie_big_nohaplotig	exon	31121541	31121965	99	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 6902 7326 +
Chr1	stalkie_big_nohaplotig	exon	31122560	31122674	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 6787 6901 +
Chr1	stalkie_big_nohaplotig	exon	31122738	31123328	99	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 6196 6786 +
Chr1	stalkie_big_nohaplotig	exon	31124126	31124296	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 6025 6195 +
Chr1	stalkie_big_nohaplotig	exon	31124553	31124740	99	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 5837 6024 +
Chr1	stalkie_big_nohaplotig	exon	31127835	31128037	99	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 5634 5836 +
Chr1	stalkie_big_nohaplotig	exon	31131448	31131641	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 5440 5633 +
Chr1	stalkie_big_nohaplotig	exon	31134440	31134608	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 5271 5439 +
Chr1	stalkie_big_nohaplotig	exon	31135290	31135404	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 5156 5270 +
Chr1	stalkie_big_nohaplotig	exon	31135936	31136034	98	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 5057 5155 +
Chr1	stalkie_big_nohaplotig	exon	31136099	31136246	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 4909 5056 +
Chr1	stalkie_big_nohaplotig	exon	31136453	31136623	98	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 4738 4908 +
Chr1	stalkie_big_nohaplotig	exon	31136763	31136867	99	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 4633 4737 +
Chr1	stalkie_big_nohaplotig	exon	31137429	31137698	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 4363 4632 +
Chr1	stalkie_big_nohaplotig	exon	31137781	31138401	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 3742 4362 +
Chr1	stalkie_big_nohaplotig	exon	31138463	31138529	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 3675 3741 +
Chr1	stalkie_big_nohaplotig	exon	31138704	31138861	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 3517 3674 +
Chr1	stalkie_big_nohaplotig	exon	31139691	31139838	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 3369 3516 +
Chr1	stalkie_big_nohaplotig	exon	31140029	31140146	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 3251 3368 +
Chr1	stalkie_big_nohaplotig	exon	31141262	31141446	98	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 3066 3250 +
Chr1	stalkie_big_nohaplotig	exon	31141538	31141728	98	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 2875 3065 +
Chr1	stalkie_big_nohaplotig	exon	31145180	31145394	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 2660 2874 +
Chr1	stalkie_big_nohaplotig	exon	31146823	31146985	98	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 2497 2659 +
Chr1	stalkie_big_nohaplotig	exon	31147192	31147398	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 2290 2496 +
Chr1	stalkie_big_nohaplotig	exon	31147456	31147662	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 2083 2289 +
Chr1	stalkie_big_nohaplotig	exon	31147722	31147833	99	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 1971 2082 +
Chr1	stalkie_big_nohaplotig	exon	31148021	31148200	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 1791 1970 +
Chr1	stalkie_big_nohaplotig	exon	31148807	31148973	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 1624 1790 +
Chr1	stalkie_big_nohaplotig	exon	31151357	31151473	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 1507 1623 +
Chr1	stalkie_big_nohaplotig	exon	31152999	31153146	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 1359 1506 +
Chr1	stalkie_big_nohaplotig	exon	31154403	31154497	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 1264 1358 +
Chr1	stalkie_big_nohaplotig	exon	31154563	31155101	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 725 1263 +
Chr1	stalkie_big_nohaplotig	exon	31155175	31155294	99	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 605 724 +
Chr1	stalkie_big_nohaplotig	exon	31155376	31155534	99	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 446 604 +
Chr1	stalkie_big_nohaplotig	exon	31155594	31155629	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 410 445 +
Chr1	stalkie_big_nohaplotig	exon	31155766	31155969	100	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 206 409 +
Chr1	stalkie_big_nohaplotig	exon	31156895	31157074	98	-	.	Parent=FBgn0035581.1.mrna1;Target=FBgn0035581.1 27 205 +
Chr1	stalkie_big_nohaplotig	CDS	31157054	31157072	.	-	0	Parent=FBgn0035581.1.mrna1
Chr1	gffcl	locus	31222403	31223260	.	-	.	ID=RLOC_00006920;geneIDs=FBgn0038285.1.path1;transcripts=FBgn0038285.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31222403	31223260	.	-	.	ID=FBgn0038285.1.mrna1;geneID=FBgn0038285.1.path1;Name=FBgn0038285.1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=849;mismatches=9;indels=0;unknowns=0;Target=FBgn0038285.1 858 1 .;locus=RLOC_00006920
Chr1	stalkie_big_nohaplotig	exon	31222403	31223260	98	-	.	Parent=FBgn0038285.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	31222403	31223260	.	-	0	Parent=FBgn0038285.1.mrna1
Chr1	gffcl	locus	31278404	31279001	.	+	.	ID=RLOC_00006921;geneIDs=comp1228913_c0_seq1.path1;transcripts=comp1228913_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31278404	31279001	.	+	.	ID=comp1228913_c0_seq1.mrna1;geneID=comp1228913_c0_seq1.path1;Name=comp1228913_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.2;matches=593;mismatches=5;indels=0;unknowns=0;Target=comp1228913_c0_seq1 603 6 .;CDS_Target=comp1228913_c0_seq1 218 117 .;locus=RLOC_00006921
Chr1	stalkie_big_nohaplotig	exon	31278404	31279001	99	+	.	Parent=comp1228913_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	31278515	31278616	.	+	0	Parent=comp1228913_c0_seq1.mrna1
Chr1	gffcl	locus	31309657	31310392	.	-	.	ID=RLOC_00006922;geneIDs=comp137737_c1_seq1.path1;transcripts=comp137737_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31309657	31310392	.	-	.	ID=comp137737_c1_seq1.mrna1;geneID=comp137737_c1_seq1.path1;Name=comp137737_c1_seq1;Dir=indeterminatecoverage=99.9;identity=99.6;matches=734;mismatches=2;indels=1;unknowns=0;Target=comp137737_c1_seq1 738 2 .;CDS_Target=comp137737_c1_seq1 370 245 .;locus=RLOC_00006922
Chr1	stalkie_big_nohaplotig	exon	31309657	31310392	99	-	.	Parent=comp137737_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	31310024	31310149	.	-	0	Parent=comp137737_c1_seq1.mrna1
Chr1	gffcl	locus	31316399	31318367	.	+	.	ID=RLOC_00006923;geneIDs=comp115018_c0_seq1.path1;transcripts=comp115018_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31316399	31318367	.	+	.	ID=comp115018_c0_seq1.mrna1;geneID=comp115018_c0_seq1.path1;Name=comp115018_c0_seq1;Dir=sensecoverage=100.0;identity=98.5;matches=518;mismatches=6;indels=2;unknowns=0;locus=RLOC_00006923
Chr1	stalkie_big_nohaplotig	exon	31316399	31316604	98	+	.	Parent=comp115018_c0_seq1.mrna1;Target=comp115018_c0_seq1 1 204 +
Chr1	stalkie_big_nohaplotig	exon	31318048	31318367	98	+	.	Parent=comp115018_c0_seq1.mrna1;Target=comp115018_c0_seq1 205 524 +
Chr1	stalkie_big_nohaplotig	CDS	31316571	31316604	.	+	0	Parent=comp115018_c0_seq1.mrna1;Target=comp115018_c0_seq1 171 204 +
Chr1	stalkie_big_nohaplotig	CDS	31318048	31318292	.	+	2	Parent=comp115018_c0_seq1.mrna1;Target=comp115018_c0_seq1 205 449 +
Chr1	gffcl	locus	31320023	31323046	.	+	.	ID=RLOC_00006924;geneIDs=FBgn0032369.1.path1;transcripts=FBgn0032369.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31320023	31323046	.	+	.	ID=FBgn0032369.1.mrna1;geneID=FBgn0032369.1.path1;Name=FBgn0032369.1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=2958;mismatches=53;indels=26;unknowns=0;Target=FBgn0032369.1 3024 1 .;locus=RLOC_00006924
Chr1	stalkie_big_nohaplotig	exon	31320023	31323046	97	+	.	Parent=FBgn0032369.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	31320023	31323046	.	+	0	Parent=FBgn0032369.1.mrna1
Chr1	gffcl	locus	31428398	31428716	.	-	.	ID=RLOC_00006925;geneIDs=comp474847_c0_seq1.path1;transcripts=comp474847_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31428398	31428716	.	-	.	ID=comp474847_c0_seq1.mrna1;geneID=comp474847_c0_seq1.path1;Name=comp474847_c0_seq1;Dir=indeterminatecoverage=83.9;identity=99.1;matches=316;mismatches=3;indels=0;unknowns=0;Target=comp474847_c0_seq1 378 60 .;CDS_Target=comp474847_c0_seq1 124 62 .;locus=RLOC_00006925
Chr1	stalkie_big_nohaplotig	exon	31428398	31428716	99	-	.	Parent=comp474847_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	31428652	31428714	.	-	0	Parent=comp474847_c0_seq1.mrna1
Chr1	gffcl	locus	31443738	31444170	.	+	.	ID=RLOC_00006927;geneIDs=comp145521_c0_seq1.path1;transcripts=comp145521_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31443738	31444170	.	+	.	ID=comp145521_c0_seq1.mrna1;geneID=comp145521_c0_seq1.path1;Name=comp145521_c0_seq1;Dir=indeterminatecoverage=91.5;identity=96.3;matches=417;mismatches=2;indels=14;unknowns=0;Target=comp145521_c0_seq1 431 13 .;CDS_Target=comp145521_c0_seq1 233 129 .;locus=RLOC_00006927
Chr1	stalkie_big_nohaplotig	exon	31443738	31444170	96	+	.	Parent=comp145521_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	31443868	31443972	.	+	0	Parent=comp145521_c0_seq1.mrna1
Chr1	gffcl	locus	31454264	31466225	.	+	.	ID=RLOC_00006928;geneIDs=FBgn0028573.path1;transcripts=FBgn0028573.mrna1,FBgn0028573.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31454264	31466225	.	+	.	ID=FBgn0028573.mrna1;geneID=FBgn0028573.path1;Name=FBgn0028573;Dir=sensecoverage=100.0;identity=100.0;matches=906;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006928
Chr1	stalkie_big_nohaplotig	exon	31454264	31454338	100	+	.	Parent=FBgn0028573.mrna1;Target=FBgn0028573 1 75 +
Chr1	stalkie_big_nohaplotig	exon	31460526	31460620	100	+	.	Parent=FBgn0028573.mrna1;Target=FBgn0028573 76 170 +
Chr1	stalkie_big_nohaplotig	exon	31460703	31460806	100	+	.	Parent=FBgn0028573.mrna1;Target=FBgn0028573 171 274 +
Chr1	stalkie_big_nohaplotig	exon	31460912	31460992	100	+	.	Parent=FBgn0028573.mrna1;Target=FBgn0028573 275 355 +
Chr1	stalkie_big_nohaplotig	exon	31461058	31461608	100	+	.	Parent=FBgn0028573.mrna1;Target=FBgn0028573 356 906 +
Chr1	stalkie_big_nohaplotig	exon	31463997	31464483	100	+	.	Parent=FBgn0028573.mrna1;Target=FBgn0028573 1 487 +
Chr1	stalkie_big_nohaplotig	exon	31464560	31464930	100	+	.	Parent=FBgn0028573.mrna1;Target=FBgn0028573 488 858 +
Chr1	stalkie_big_nohaplotig	exon	31464988	31465184	100	+	.	Parent=FBgn0028573.mrna1;Target=FBgn0028573 859 1055 +
Chr1	stalkie_big_nohaplotig	exon	31465241	31465363	100	+	.	Parent=FBgn0028573.mrna1;Target=FBgn0028573 1056 1178 +
Chr1	stalkie_big_nohaplotig	exon	31465418	31465521	100	+	.	Parent=FBgn0028573.mrna1;Target=FBgn0028573 1179 1282 +
Chr1	stalkie_big_nohaplotig	exon	31465576	31466225	99	+	.	Parent=FBgn0028573.mrna1;Target=FBgn0028573 1283 1932 +
Chr1	stalkie_big_nohaplotig	CDS	31454264	31454338	.	+	0	Parent=FBgn0028573.mrna1;Target=FBgn0028573 1 75 +
Chr1	stalkie_big_nohaplotig	CDS	31460526	31460620	.	+	0	Parent=FBgn0028573.mrna1;Target=FBgn0028573 76 170 +
Chr1	stalkie_big_nohaplotig	CDS	31460703	31460806	.	+	1	Parent=FBgn0028573.mrna1;Target=FBgn0028573 171 274 +
Chr1	stalkie_big_nohaplotig	CDS	31460912	31460992	.	+	2	Parent=FBgn0028573.mrna1;Target=FBgn0028573 275 355 +
Chr1	stalkie_big_nohaplotig	CDS	31461058	31461608	.	+	2	Parent=FBgn0028573.mrna1;Target=FBgn0028573 356 906 +
Chr1	stalkie_big_nohaplotig	CDS	31463997	31464483	.	+	0	Parent=FBgn0028573.mrna1;Target=FBgn0028573 1 487 +
Chr1	stalkie_big_nohaplotig	CDS	31464560	31464930	.	+	2	Parent=FBgn0028573.mrna1;Target=FBgn0028573 488 858 +
Chr1	stalkie_big_nohaplotig	CDS	31464988	31465184	.	+	0	Parent=FBgn0028573.mrna1;Target=FBgn0028573 859 1055 +
Chr1	stalkie_big_nohaplotig	CDS	31465241	31465363	.	+	1	Parent=FBgn0028573.mrna1;Target=FBgn0028573 1056 1178 +
Chr1	stalkie_big_nohaplotig	CDS	31465418	31465521	.	+	1	Parent=FBgn0028573.mrna1;Target=FBgn0028573 1179 1282 +
Chr1	stalkie_big_nohaplotig	CDS	31465576	31466225	.	+	2	Parent=FBgn0028573.mrna1;Target=FBgn0028573 1283 1932 +
Chr1	stalkie_big_nohaplotig	mRNA	31463997	31466225	.	+	.	ID=FBgn0028573.mrna1;geneID=FBgn0028573.path1;Name=FBgn0028573;Dir=sensecoverage=100.0;identity=99.9;matches=1931;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006928
Chr1	stalkie_big_nohaplotig	exon	31463997	31466225	.	+	.	Parent=FBgn0028573.mrna1
Chr1	gffcl	locus	31468485	31470713	.	-	.	ID=RLOC_00006929;geneIDs=FBgn0028573.path2;transcripts=FBgn0028573.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	31468485	31470713	.	-	.	ID=FBgn0028573.mrna2;geneID=FBgn0028573.path2;Name=FBgn0028573;Dir=sensecoverage=100.0;identity=99.9;matches=1931;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006929
Chr1	stalkie_big_nohaplotig	exon	31468485	31469134	100	-	.	Parent=FBgn0028573.mrna2;Target=FBgn0028573 1283 1932 +
Chr1	stalkie_big_nohaplotig	exon	31469189	31469292	100	-	.	Parent=FBgn0028573.mrna2;Target=FBgn0028573 1179 1282 +
Chr1	stalkie_big_nohaplotig	exon	31469347	31469469	100	-	.	Parent=FBgn0028573.mrna2;Target=FBgn0028573 1056 1178 +
Chr1	stalkie_big_nohaplotig	exon	31469526	31469722	100	-	.	Parent=FBgn0028573.mrna2;Target=FBgn0028573 859 1055 +
Chr1	stalkie_big_nohaplotig	exon	31469780	31470150	100	-	.	Parent=FBgn0028573.mrna2;Target=FBgn0028573 488 858 +
Chr1	stalkie_big_nohaplotig	exon	31470227	31470713	99	-	.	Parent=FBgn0028573.mrna2;Target=FBgn0028573 1 487 +
Chr1	stalkie_big_nohaplotig	CDS	31468485	31469134	.	-	2	Parent=FBgn0028573.mrna2;Target=FBgn0028573 1283 1932 +
Chr1	stalkie_big_nohaplotig	CDS	31469189	31469292	.	-	1	Parent=FBgn0028573.mrna2;Target=FBgn0028573 1179 1282 +
Chr1	stalkie_big_nohaplotig	CDS	31469347	31469469	.	-	1	Parent=FBgn0028573.mrna2;Target=FBgn0028573 1056 1178 +
Chr1	stalkie_big_nohaplotig	CDS	31469526	31469722	.	-	0	Parent=FBgn0028573.mrna2;Target=FBgn0028573 859 1055 +
Chr1	stalkie_big_nohaplotig	CDS	31469780	31470150	.	-	2	Parent=FBgn0028573.mrna2;Target=FBgn0028573 488 858 +
Chr1	stalkie_big_nohaplotig	CDS	31470227	31470713	.	-	0	Parent=FBgn0028573.mrna2;Target=FBgn0028573 1 487 +
Chr1	gffcl	locus	31473383	31474633	.	+	.	ID=RLOC_00006930;geneIDs=Dp_FBgn0243606.path3;transcripts=Dp_FBgn0243606.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	31473383	31474633	.	+	.	ID=Dp_FBgn0243606.mrna3;geneID=Dp_FBgn0243606.path3;Name=Dp_FBgn0243606;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1230;mismatches=16;indels=0;unknowns=5;Target=Dp_FBgn0243606 1251 1 .;locus=RLOC_00006930
Chr1	stalkie_big_nohaplotig	exon	31473383	31474633	98	+	.	Parent=Dp_FBgn0243606.mrna3
Chr1	stalkie_big_nohaplotig	CDS	31473383	31474633	.	+	0	Parent=Dp_FBgn0243606.mrna3
Chr1	gffcl	locus	31492946	31494093	.	-	.	ID=RLOC_00006931;geneIDs=comp161001_c0_seq1.path1;transcripts=comp161001_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31492946	31494093	.	-	.	ID=comp161001_c0_seq1.mrna1;geneID=comp161001_c0_seq1.path1;Name=comp161001_c0_seq1;Dir=indeterminatecoverage=99.9;identity=95.4;matches=1108;mismatches=40;indels=14;unknowns=0;Target=comp161001_c0_seq1 1163 2 .;CDS_Target=comp161001_c0_seq1 762 637 .;locus=RLOC_00006931
Chr1	stalkie_big_nohaplotig	exon	31492946	31494093	95	-	.	Parent=comp161001_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	31493347	31493472	.	-	0	Parent=comp161001_c0_seq1.mrna1
Chr1	gffcl	locus	31495165	31496165	.	+	.	ID=RLOC_00006932;geneIDs=comp158588_c0_seq1.path1;transcripts=comp158588_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31495165	31496165	.	+	.	ID=comp158588_c0_seq1.mrna1;geneID=comp158588_c0_seq1.path1;Name=comp158588_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.4;matches=975;mismatches=26;indels=0;unknowns=0;Target=comp158588_c0_seq1 1001 1 .;CDS_Target=comp158588_c0_seq1 519 370 .;locus=RLOC_00006932
Chr1	stalkie_big_nohaplotig	exon	31495165	31496165	97	+	.	Parent=comp158588_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	31495534	31495683	.	+	0	Parent=comp158588_c0_seq1.mrna1
Chr1	gffcl	locus	31496278	31496801	.	+	.	ID=RLOC_00006933;geneIDs=comp155160_c0_seq1.path1;transcripts=comp155160_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31496278	31496801	.	+	.	ID=comp155160_c0_seq1.mrna1;geneID=comp155160_c0_seq1.path1;Name=comp155160_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.9;matches=510;mismatches=14;indels=19;unknowns=0;Target=comp155160_c0_seq1 543 1 .;CDS_Target=comp155160_c0_seq1 52 2 .;locus=RLOC_00006933
Chr1	stalkie_big_nohaplotig	exon	31496278	31496801	93	+	.	Parent=comp155160_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	31496279	31496329	.	+	0	Parent=comp155160_c0_seq1.mrna1
Chr1	gffcl	locus	31502329	31502574	.	+	.	ID=RLOC_00006934;geneIDs=comp106131_c0_seq1.path1;transcripts=comp106131_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31502329	31502574	.	+	.	ID=comp106131_c0_seq1.mrna1;geneID=comp106131_c0_seq1.path1;Name=comp106131_c0_seq1;Dir=indeterminatecoverage=58.6;identity=100.0;matches=246;mismatches=0;indels=0;unknowns=0;Target=comp106131_c0_seq1 409 164 .;CDS_Target=comp106131_c0_seq1 243 166 .;locus=RLOC_00006934
Chr1	stalkie_big_nohaplotig	exon	31502329	31502574	100	+	.	Parent=comp106131_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	31502331	31502408	.	+	0	Parent=comp106131_c0_seq1.mrna1
Chr1	gffcl	locus	31502929	31504388	.	+	.	ID=RLOC_00006935;geneIDs=comp161578_c0_seq1.path1;transcripts=comp161578_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31502929	31504388	.	+	.	ID=comp161578_c0_seq1.mrna1;geneID=comp161578_c0_seq1.path1;Name=comp161578_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.0;matches=1388;mismatches=38;indels=51;unknowns=0;Target=comp161578_c0_seq1 1443 1 .;CDS_Target=comp161578_c0_seq1 557 510 .;locus=RLOC_00006935
Chr1	stalkie_big_nohaplotig	exon	31502929	31504388	93	+	.	Parent=comp161578_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	31503431	31503478	.	+	0	Parent=comp161578_c0_seq1.mrna1
Chr1	gffcl	locus	31507933	31657200	.	-	.	ID=RLOC_00006936;geneIDs=FBgn0035142.1.path1,comp161296_c2_seq1.path1;transcripts=comp161296_c2_seq1.mrna1,FBgn0035142.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31507933	31657200	.	-	.	ID=comp161296_c2_seq1.mrna1;geneID=comp161296_c2_seq1.path1;Name=comp161296_c2_seq1;Dir=antisensecoverage=73.7;identity=99.3;matches=3732;mismatches=21;indels=6;unknowns=0;locus=RLOC_00006936
Chr1	stalkie_big_nohaplotig	exon	31507933	31509313	99	-	.	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 1 1375 -
Chr1	stalkie_big_nohaplotig	exon	31509373	31509602	99	-	.	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 1376 1605 -
Chr1	stalkie_big_nohaplotig	exon	31509663	31509946	99	-	.	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 1606 1889 -
Chr1	stalkie_big_nohaplotig	exon	31510007	31510313	99	-	.	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 1890 2196 -
Chr1	stalkie_big_nohaplotig	exon	31510369	31510809	99	-	.	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 2197 2637 -
Chr1	stalkie_big_nohaplotig	exon	31510871	31511181	99	-	.	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 2638 2948 -
Chr1	stalkie_big_nohaplotig	exon	31511242	31511562	99	-	.	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 2949 3269 -
Chr1	stalkie_big_nohaplotig	exon	31511634	31511983	99	-	.	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3270 3619 -
Chr1	stalkie_big_nohaplotig	exon	31583708	31583768	100	-	.	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3620 3680 -
Chr1	stalkie_big_nohaplotig	exon	31590501	31590503	100	-	.	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3681 3683 -
Chr1	stalkie_big_nohaplotig	exon	31594695	31594702	100	-	.	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3684 3691 -
Chr1	stalkie_big_nohaplotig	exon	31594738	31594740	100	-	.	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3701 3703 -
Chr1	stalkie_big_nohaplotig	exon	31598733	31598737	100	-	.	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3704 3708 -
Chr1	stalkie_big_nohaplotig	exon	31603454	31603462	100	-	.	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3709 3717 -
Chr1	stalkie_big_nohaplotig	exon	31605330	31605331	100	-	.	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3718 3719 -
Chr1	stalkie_big_nohaplotig	exon	31608930	31608934	100	-	.	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3720 3724 -
Chr1	stalkie_big_nohaplotig	exon	31632926	31632929	100	-	.	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3725 3728 -
Chr1	stalkie_big_nohaplotig	exon	31639864	31639868	80	-	.	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3729 3733 -
Chr1	stalkie_big_nohaplotig	exon	31644406	31644412	100	-	.	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3734 3740 -
Chr1	stalkie_big_nohaplotig	exon	31648636	31648638	66	-	.	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3741 3743 -
Chr1	stalkie_big_nohaplotig	exon	31656224	31656232	66	-	.	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3744 3752 -
Chr1	stalkie_big_nohaplotig	exon	31657191	31657200	90	-	.	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3753 3762 -
Chr1	stalkie_big_nohaplotig	CDS	31507935	31509313	.	-	2	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3 1375 .
Chr1	stalkie_big_nohaplotig	CDS	31509373	31509602	.	-	1	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 1376 1605 .
Chr1	stalkie_big_nohaplotig	CDS	31509663	31509946	.	-	0	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 1606 1889 .
Chr1	stalkie_big_nohaplotig	CDS	31510007	31510313	.	-	1	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 1890 2196 .
Chr1	stalkie_big_nohaplotig	CDS	31510369	31510809	.	-	1	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 2197 2637 .
Chr1	stalkie_big_nohaplotig	CDS	31510871	31511181	.	-	0	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 2638 2948 .
Chr1	stalkie_big_nohaplotig	CDS	31511242	31511562	.	-	0	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 2949 3269 .
Chr1	stalkie_big_nohaplotig	CDS	31511634	31511983	.	-	2	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3270 3619 .
Chr1	stalkie_big_nohaplotig	CDS	31583708	31583768	.	-	0	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3620 3680 .
Chr1	stalkie_big_nohaplotig	CDS	31590501	31590503	.	-	0	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3681 3683 .
Chr1	stalkie_big_nohaplotig	CDS	31594695	31594702	.	-	2	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3684 3691 .
Chr1	stalkie_big_nohaplotig	CDS	31594738	31594740	.	-	2	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3701 3703 .
Chr1	stalkie_big_nohaplotig	CDS	31598733	31598737	.	-	1	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3704 3708 .
Chr1	stalkie_big_nohaplotig	CDS	31603454	31603462	.	-	1	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3709 3717 .
Chr1	stalkie_big_nohaplotig	CDS	31605330	31605331	.	-	0	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3718 3719 .
Chr1	stalkie_big_nohaplotig	CDS	31608930	31608934	.	-	2	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3720 3724 .
Chr1	stalkie_big_nohaplotig	CDS	31632926	31632929	.	-	0	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3725 3728 .
Chr1	stalkie_big_nohaplotig	CDS	31639864	31639868	.	-	2	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3729 3733 .
Chr1	stalkie_big_nohaplotig	CDS	31644406	31644412	.	-	0	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3734 3740 .
Chr1	stalkie_big_nohaplotig	CDS	31648636	31648638	.	-	0	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3741 3743 .
Chr1	stalkie_big_nohaplotig	CDS	31656224	31656232	.	-	0	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3744 3752 .
Chr1	stalkie_big_nohaplotig	CDS	31657191	31657199	.	-	0	Parent=comp161296_c2_seq1.mrna1;Target=comp161296_c2_seq1 3753 3761 .
Chr1	stalkie_big_nohaplotig	mRNA	31507936	31598737	.	-	.	ID=FBgn0035142.1.mrna1;geneID=FBgn0035142.1.path1;Name=FBgn0035142.1;Dir=sensecoverage=73.7;identity=99.2;matches=2972;mismatches=16;indels=8;unknowns=0;locus=RLOC_00006936
Chr1	stalkie_big_nohaplotig	exon	31507936	31508068	95	-	.	Parent=FBgn0035142.1.mrna1;Target=FBgn0035142.1 3926 4052 +
Chr1	stalkie_big_nohaplotig	exon	31508786	31509313	100	-	.	Parent=FBgn0035142.1.mrna1;Target=FBgn0035142.1 3398 3925 +
Chr1	stalkie_big_nohaplotig	exon	31509373	31509602	99	-	.	Parent=FBgn0035142.1.mrna1;Target=FBgn0035142.1 3168 3397 +
Chr1	stalkie_big_nohaplotig	exon	31509663	31509946	99	-	.	Parent=FBgn0035142.1.mrna1;Target=FBgn0035142.1 2884 3167 +
Chr1	stalkie_big_nohaplotig	exon	31510007	31510313	99	-	.	Parent=FBgn0035142.1.mrna1;Target=FBgn0035142.1 2577 2883 +
Chr1	stalkie_big_nohaplotig	exon	31510369	31510809	99	-	.	Parent=FBgn0035142.1.mrna1;Target=FBgn0035142.1 2136 2576 +
Chr1	stalkie_big_nohaplotig	exon	31510871	31511181	99	-	.	Parent=FBgn0035142.1.mrna1;Target=FBgn0035142.1 1825 2135 +
Chr1	stalkie_big_nohaplotig	exon	31511242	31511562	99	-	.	Parent=FBgn0035142.1.mrna1;Target=FBgn0035142.1 1504 1824 +
Chr1	stalkie_big_nohaplotig	exon	31511634	31511983	99	-	.	Parent=FBgn0035142.1.mrna1;Target=FBgn0035142.1 1154 1503 +
Chr1	stalkie_big_nohaplotig	exon	31583708	31583768	100	-	.	Parent=FBgn0035142.1.mrna1;Target=FBgn0035142.1 1093 1153 +
Chr1	stalkie_big_nohaplotig	exon	31590501	31590503	100	-	.	Parent=FBgn0035142.1.mrna1;Target=FBgn0035142.1 1090 1092 +
Chr1	stalkie_big_nohaplotig	exon	31594802	31594813	83	-	.	Parent=FBgn0035142.1.mrna1;Target=FBgn0035142.1 1078 1089 +
Chr1	stalkie_big_nohaplotig	exon	31598723	31598737	80	-	.	Parent=FBgn0035142.1.mrna1;Target=FBgn0035142.1 1065 1077 +
Chr1	stalkie_big_nohaplotig	CDS	31507938	31508068	.	-	2	Parent=FBgn0035142.1.mrna1;Target=FBgn0035142.1 3926 4050 +
Chr1	stalkie_big_nohaplotig	CDS	31508786	31509313	.	-	2	Parent=FBgn0035142.1.mrna1;Target=FBgn0035142.1 3398 3925 +
Chr1	stalkie_big_nohaplotig	CDS	31509373	31509602	.	-	1	Parent=FBgn0035142.1.mrna1;Target=FBgn0035142.1 3168 3397 +
Chr1	stalkie_big_nohaplotig	CDS	31509663	31509946	.	-	0	Parent=FBgn0035142.1.mrna1;Target=FBgn0035142.1 2884 3167 +
Chr1	stalkie_big_nohaplotig	CDS	31510007	31510313	.	-	1	Parent=FBgn0035142.1.mrna1;Target=FBgn0035142.1 2577 2883 +
Chr1	stalkie_big_nohaplotig	CDS	31510369	31510809	.	-	1	Parent=FBgn0035142.1.mrna1;Target=FBgn0035142.1 2136 2576 +
Chr1	stalkie_big_nohaplotig	CDS	31510871	31511181	.	-	0	Parent=FBgn0035142.1.mrna1;Target=FBgn0035142.1 1825 2135 +
Chr1	stalkie_big_nohaplotig	CDS	31511242	31511328	.	-	0	Parent=FBgn0035142.1.mrna1;Target=FBgn0035142.1 1738 1824 +
Chr1	gffcl	locus	31509606	31941697	.	+	.	ID=RLOC_00006937;geneIDs=FBgn0020251.1.path1,comp159016_c0_seq1.path1,comp162635_c1_seq1.path1;transcripts=comp159016_c0_seq1.mrna1,FBgn0020251.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31509606	31941697	.	+	.	ID=comp159016_c0_seq1.mrna1;geneID=comp159016_c0_seq1.path1;Name=comp159016_c0_seq1;Dir=antisensecoverage=75.1;identity=92.8;matches=2438;mismatches=78;indels=110;unknowns=0;locus=RLOC_00006937
Chr1	stalkie_big_nohaplotig	exon	31509606	31509615	100	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 3117 3126 -
Chr1	stalkie_big_nohaplotig	exon	31515714	31515722	100	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 3108 3116 -
Chr1	stalkie_big_nohaplotig	exon	31530902	31530904	100	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 3105 3107 -
Chr1	stalkie_big_nohaplotig	exon	31535937	31535941	100	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 3100 3104 -
Chr1	stalkie_big_nohaplotig	exon	31548899	31548904	100	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2996 3001 -
Chr1	stalkie_big_nohaplotig	exon	31563761	31563768	100	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2988 2995 -
Chr1	stalkie_big_nohaplotig	exon	31567723	31567752	46	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2938 2987 -
Chr1	stalkie_big_nohaplotig	exon	31571755	31571762	100	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2930 2937 -
Chr1	stalkie_big_nohaplotig	exon	31576799	31576847	45	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2868 2929 -
Chr1	stalkie_big_nohaplotig	exon	31595663	31595673	100	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2830 2840 -
Chr1	stalkie_big_nohaplotig	exon	31619773	31619783	100	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2660 2670 -
Chr1	stalkie_big_nohaplotig	exon	31620412	31620415	100	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2639 2642 -
Chr1	stalkie_big_nohaplotig	exon	31661334	31661343	80	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2629 2638 -
Chr1	stalkie_big_nohaplotig	exon	31672101	31672126	40	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2577 2628 -
Chr1	stalkie_big_nohaplotig	exon	31679243	31679255	100	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2564 2576 -
Chr1	stalkie_big_nohaplotig	exon	31706750	31706752	66	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2561 2563 -
Chr1	stalkie_big_nohaplotig	exon	31711463	31711473	100	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2550 2560 -
Chr1	stalkie_big_nohaplotig	exon	31722936	31722955	45	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2517 2549 -
Chr1	stalkie_big_nohaplotig	exon	31737861	31737867	100	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2510 2516 -
Chr1	stalkie_big_nohaplotig	exon	31766530	31766544	93	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2444 2458 -
Chr1	stalkie_big_nohaplotig	exon	31769055	31769068	85	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2430 2443 -
Chr1	stalkie_big_nohaplotig	exon	31773238	31773251	71	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2416 2429 -
Chr1	stalkie_big_nohaplotig	exon	31777108	31777114	100	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2409 2415 -
Chr1	stalkie_big_nohaplotig	exon	31810755	31810799	52	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2360 2408 -
Chr1	stalkie_big_nohaplotig	exon	31823119	31823127	88	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2351 2359 -
Chr1	stalkie_big_nohaplotig	exon	31825694	31825701	100	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2343 2350 -
Chr1	stalkie_big_nohaplotig	exon	31827084	31827087	100	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2339 2342 -
Chr1	stalkie_big_nohaplotig	exon	31840336	31840346	31	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2264 2298 -
Chr1	stalkie_big_nohaplotig	exon	31910471	31910493	74	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 2147 2173 -
Chr1	stalkie_big_nohaplotig	exon	31938399	31938844	99	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 1678 2123 -
Chr1	stalkie_big_nohaplotig	exon	31938896	31939087	98	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 1486 1677 -
Chr1	stalkie_big_nohaplotig	exon	31939154	31939638	99	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 1001 1485 -
Chr1	stalkie_big_nohaplotig	exon	31939707	31939865	99	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 842 1000 -
Chr1	stalkie_big_nohaplotig	exon	31939926	31940058	100	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 709 841 -
Chr1	stalkie_big_nohaplotig	exon	31940869	31940980	97	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 600 708 -
Chr1	stalkie_big_nohaplotig	exon	31941049	31941189	100	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 459 599 -
Chr1	stalkie_big_nohaplotig	exon	31941245	31941697	99	+	.	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 5 458 -
Chr1	stalkie_big_nohaplotig	CDS	31938558	31938844	.	+	0	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 1678 1964 .
Chr1	stalkie_big_nohaplotig	CDS	31938896	31939087	.	+	1	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 1486 1677 .
Chr1	stalkie_big_nohaplotig	CDS	31939154	31939638	.	+	1	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 1001 1485 .
Chr1	stalkie_big_nohaplotig	CDS	31939707	31939865	.	+	2	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 842 1000 .
Chr1	stalkie_big_nohaplotig	CDS	31939926	31940058	.	+	2	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 709 841 .
Chr1	stalkie_big_nohaplotig	CDS	31940869	31940980	.	+	1	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 600 708 .
Chr1	stalkie_big_nohaplotig	CDS	31941049	31941060	.	+	0	Parent=comp159016_c0_seq1.mrna1;Target=comp159016_c0_seq1 588 599 .
Chr1	stalkie_big_nohaplotig	mRNA	31714048	31775495	.	+	.	ID=FBgn0020251.1.mrna1;geneID=FBgn0020251.1.path1;Name=FBgn0020251.1;Dir=sensecoverage=100.0;identity=99.6;matches=2716;mismatches=11;indels=0;unknowns=0;locus=RLOC_00006937
Chr1	stalkie_big_nohaplotig	exon	31714048	31714265	100	+	.	Parent=FBgn0020251.1.mrna1;Target=FBgn0020251.1 1 218 +
Chr1	stalkie_big_nohaplotig	exon	31735501	31735704	99	+	.	Parent=FBgn0020251.1.mrna1;Target=FBgn0020251.1 219 422 +
Chr1	stalkie_big_nohaplotig	exon	31765191	31767042	99	+	.	Parent=FBgn0020251.1.mrna1;Target=FBgn0020251.1 423 2274 +
Chr1	stalkie_big_nohaplotig	exon	31773179	31773531	100	+	.	Parent=FBgn0020251.1.mrna1;Target=FBgn0020251.1 2275 2627 +
Chr1	stalkie_big_nohaplotig	exon	31775396	31775495	100	+	.	Parent=FBgn0020251.1.mrna1;Target=FBgn0020251.1 2628 2727 +
Chr1	stalkie_big_nohaplotig	CDS	31714048	31714265	.	+	0	Parent=FBgn0020251.1.mrna1;Target=FBgn0020251.1 1 218 +
Chr1	stalkie_big_nohaplotig	CDS	31735501	31735704	.	+	1	Parent=FBgn0020251.1.mrna1;Target=FBgn0020251.1 219 422 +
Chr1	stalkie_big_nohaplotig	CDS	31765191	31767042	.	+	1	Parent=FBgn0020251.1.mrna1;Target=FBgn0020251.1 423 2274 +
Chr1	stalkie_big_nohaplotig	CDS	31773179	31773531	.	+	0	Parent=FBgn0020251.1.mrna1;Target=FBgn0020251.1 2275 2627 +
Chr1	stalkie_big_nohaplotig	CDS	31775396	31775495	.	+	1	Parent=FBgn0020251.1.mrna1;Target=FBgn0020251.1 2628 2727 +
Chr1	gffcl	locus	31584936	31603346	.	-	.	ID=RLOC_00006938;geneIDs=comp148834_c1_seq1.path1;transcripts=comp148834_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31584936	31603346	.	-	.	ID=comp148834_c1_seq1.mrna1;geneID=comp148834_c1_seq1.path1;Name=comp148834_c1_seq1;Dir=antisensecoverage=94.6;identity=99.4;matches=524;mismatches=3;indels=0;unknowns=0;Target=comp148834_c1_seq1 125 178 .;locus=RLOC_00006938
Chr1	stalkie_big_nohaplotig	exon	31584936	31585056	99	-	.	Parent=comp148834_c1_seq1.mrna1;Target=comp148834_c1_seq1 1 121 -
Chr1	stalkie_big_nohaplotig	exon	31602941	31603346	99	-	.	Parent=comp148834_c1_seq1.mrna1;Target=comp148834_c1_seq1 122 527 -
Chr1	stalkie_big_nohaplotig	CDS	31602944	31602997	.	-	0	Parent=comp148834_c1_seq1.mrna1
Chr1	gffcl	locus	31589486	31589868	.	-	.	ID=RLOC_00006939;geneIDs=comp105909_c0_seq1.path1;transcripts=comp105909_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31589486	31589868	.	-	.	ID=comp105909_c0_seq1.mrna1;geneID=comp105909_c0_seq1.path1;Name=comp105909_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=381;mismatches=2;indels=0;unknowns=0;Target=comp105909_c0_seq1 383 1 .;CDS_Target=comp105909_c0_seq1 118 2 .;locus=RLOC_00006939
Chr1	stalkie_big_nohaplotig	exon	31589486	31589868	99	-	.	Parent=comp105909_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	31589751	31589867	.	-	0	Parent=comp105909_c0_seq1.mrna1
Chr1	gffcl	locus	31606382	31607557	.	+	.	ID=RLOC_00006940;geneIDs=FBgn0035140.1.path1;transcripts=FBgn0035140.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31606382	31607557	.	+	.	ID=FBgn0035140.1.mrna1;geneID=FBgn0035140.1.path1;Name=FBgn0035140.1;Dir=sensecoverage=100.0;identity=99.6;matches=941;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006940
Chr1	stalkie_big_nohaplotig	exon	31606382	31606826	99	+	.	Parent=FBgn0035140.1.mrna1;Target=FBgn0035140.1 1 445 +
Chr1	stalkie_big_nohaplotig	exon	31606884	31606991	100	+	.	Parent=FBgn0035140.1.mrna1;Target=FBgn0035140.1 446 553 +
Chr1	stalkie_big_nohaplotig	exon	31607056	31607243	100	+	.	Parent=FBgn0035140.1.mrna1;Target=FBgn0035140.1 554 741 +
Chr1	stalkie_big_nohaplotig	exon	31607297	31607457	98	+	.	Parent=FBgn0035140.1.mrna1;Target=FBgn0035140.1 742 902 +
Chr1	stalkie_big_nohaplotig	exon	31607515	31607557	100	+	.	Parent=FBgn0035140.1.mrna1;Target=FBgn0035140.1 903 945 +
Chr1	stalkie_big_nohaplotig	CDS	31606382	31606826	.	+	0	Parent=FBgn0035140.1.mrna1;Target=FBgn0035140.1 1 445 +
Chr1	stalkie_big_nohaplotig	CDS	31606884	31606991	.	+	2	Parent=FBgn0035140.1.mrna1;Target=FBgn0035140.1 446 553 +
Chr1	stalkie_big_nohaplotig	CDS	31607056	31607243	.	+	2	Parent=FBgn0035140.1.mrna1;Target=FBgn0035140.1 554 741 +
Chr1	stalkie_big_nohaplotig	CDS	31607297	31607457	.	+	0	Parent=FBgn0035140.1.mrna1;Target=FBgn0035140.1 742 902 +
Chr1	stalkie_big_nohaplotig	CDS	31607515	31607557	.	+	1	Parent=FBgn0035140.1.mrna1;Target=FBgn0035140.1 903 945 +
Chr1	gffcl	locus	31607719	31608394	.	-	.	ID=RLOC_00006941;geneIDs=FBgn0035141.2.path1;transcripts=FBgn0035141.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31607719	31608394	.	-	.	ID=FBgn0035141.2.mrna1;geneID=FBgn0035141.2.path1;Name=FBgn0035141.2;Dir=sensecoverage=100.0;identity=100.0;matches=549;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006941
Chr1	stalkie_big_nohaplotig	exon	31607719	31608163	100	-	.	Parent=FBgn0035141.2.mrna1;Target=FBgn0035141.2 105 549 +
Chr1	stalkie_big_nohaplotig	exon	31608291	31608394	100	-	.	Parent=FBgn0035141.2.mrna1;Target=FBgn0035141.2 1 104 +
Chr1	stalkie_big_nohaplotig	CDS	31607719	31608163	.	-	1	Parent=FBgn0035141.2.mrna1;Target=FBgn0035141.2 105 549 +
Chr1	stalkie_big_nohaplotig	CDS	31608291	31608394	.	-	0	Parent=FBgn0035141.2.mrna1;Target=FBgn0035141.2 1 104 +
Chr1	gffcl	locus	31610943	31712651	.	+	.	ID=RLOC_00006942;geneIDs=comp147340_c0_seq1.path1;transcripts=comp147340_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31610943	31712651	.	+	.	ID=comp147340_c0_seq1.mrna1;geneID=comp147340_c0_seq1.path1;Name=comp147340_c0_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=1600;mismatches=8;indels=2;unknowns=0;Target=comp147340_c0_seq1 1207 1440 +;locus=RLOC_00006942
Chr1	stalkie_big_nohaplotig	exon	31610943	31611902	99	+	.	Parent=comp147340_c0_seq1.mrna1;Target=comp147340_c0_seq1 1 961 +
Chr1	stalkie_big_nohaplotig	exon	31642520	31642564	91	+	.	Parent=comp147340_c0_seq1.mrna1;Target=comp147340_c0_seq1 962 1006 +
Chr1	stalkie_big_nohaplotig	exon	31662979	31663020	100	+	.	Parent=comp147340_c0_seq1.mrna1;Target=comp147340_c0_seq1 1007 1048 +
Chr1	stalkie_big_nohaplotig	exon	31712090	31712651	99	+	.	Parent=comp147340_c0_seq1.mrna1;Target=comp147340_c0_seq1 1049 1609 +
Chr1	stalkie_big_nohaplotig	CDS	31712248	31712481	.	+	0	Parent=comp147340_c0_seq1.mrna1
Chr1	gffcl	locus	31612410	31612629	.	+	.	ID=RLOC_00006943;geneIDs=comp183_c0_seq1.path1;transcripts=comp183_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31612410	31612629	.	+	.	ID=comp183_c0_seq1.mrna1;geneID=comp183_c0_seq1.path1;Name=comp183_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.3;matches=203;mismatches=17;indels=0;unknowns=0;Target=comp183_c0_seq1 220 1 .;CDS_Target=comp183_c0_seq1 38 3 .;locus=RLOC_00006943
Chr1	stalkie_big_nohaplotig	exon	31612410	31612629	92	+	.	Parent=comp183_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	31612412	31612447	.	+	0	Parent=comp183_c0_seq1.mrna1
Chr1	gffcl	locus	31644793	31649485	.	-	.	ID=RLOC_00006944;geneIDs=comp137464_c0_seq1.path1;transcripts=comp137464_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31644793	31649485	.	-	.	ID=comp137464_c0_seq1.mrna1;geneID=comp137464_c0_seq1.path1;Name=comp137464_c0_seq1;Dir=sensecoverage=99.8;identity=96.3;matches=618;mismatches=18;indels=6;unknowns=0;Target=comp137464_c0_seq1 225 296 +;locus=RLOC_00006944
Chr1	stalkie_big_nohaplotig	exon	31644793	31645107	99	-	.	Parent=comp137464_c0_seq1.mrna1;Target=comp137464_c0_seq1 326 640 +
Chr1	stalkie_big_nohaplotig	exon	31649162	31649485	93	-	.	Parent=comp137464_c0_seq1.mrna1;Target=comp137464_c0_seq1 2 325 +
Chr1	stalkie_big_nohaplotig	CDS	31649191	31649259	.	-	0	Parent=comp137464_c0_seq1.mrna1
Chr1	gffcl	locus	31778318	31779703	.	.	.	ID=RLOC_00006945;geneIDs=comp118972_c0_seq1.path1,comp160894_c0_seq1.path1;transcripts=comp160894_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31778318	31779477	.	-	.	ID=comp160894_c0_seq1.mrna1;geneID=comp160894_c0_seq1.path1;Name=comp160894_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=1134;mismatches=21;indels=8;unknowns=0;Target=comp160894_c0_seq1 1158 1 .;CDS_Target=comp160894_c0_seq1 102 25 .;locus=RLOC_00006945
Chr1	stalkie_big_nohaplotig	exon	31778318	31779477	97	-	.	Parent=comp160894_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	31779374	31779453	.	-	0	Parent=comp160894_c0_seq1.mrna1
Chr1	gffcl	locus	31782093	31844362	.	+	.	ID=RLOC_00006946;geneIDs=FBgn0042185.1.path1;transcripts=FBgn0042185.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31782093	31844362	.	+	.	ID=FBgn0042185.1.mrna1;geneID=FBgn0042185.1.path1;Name=FBgn0042185.1;Dir=sensecoverage=25.5;identity=99.6;matches=270;mismatches=1;indels=0;unknowns=0;locus=RLOC_00006946
Chr1	stalkie_big_nohaplotig	exon	31782093	31782296	100	+	.	Parent=FBgn0042185.1.mrna1;Target=FBgn0042185.1 1 204 +
Chr1	stalkie_big_nohaplotig	exon	31844296	31844362	98	+	.	Parent=FBgn0042185.1.mrna1;Target=FBgn0042185.1 205 271 +
Chr1	stalkie_big_nohaplotig	CDS	31782093	31782296	.	+	0	Parent=FBgn0042185.1.mrna1;Target=FBgn0042185.1 1 204 +
Chr1	stalkie_big_nohaplotig	CDS	31844296	31844362	.	+	0	Parent=FBgn0042185.1.mrna1;Target=FBgn0042185.1 205 271 +
Chr1	gffcl	locus	31897003	33628593	.	-	.	ID=RLOC_00006948;geneIDs=FBgn0035707.1.path1,comp72641_c0_seq1.path2;transcripts=comp72641_c0_seq1.mrna2,FBgn0035707.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31897003	33628593	.	-	.	ID=comp72641_c0_seq1.mrna2;geneID=comp72641_c0_seq1.path2;Name=comp72641_c0_seq1;Dir=indeterminatecoverage=89.8;identity=84.6;matches=433;mismatches=44;indels=35;unknowns=0;locus=RLOC_00006948
Chr1	stalkie_big_nohaplotig	exon	31897003	31897018	100	-	.	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 624 609 .
Chr1	stalkie_big_nohaplotig	exon	31905200	31905202	100	-	.	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 608 606 .
Chr1	stalkie_big_nohaplotig	exon	31908131	31908143	69	-	.	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 605 596 .
Chr1	stalkie_big_nohaplotig	exon	31910034	31910035	100	-	.	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 595 594 .
Chr1	stalkie_big_nohaplotig	exon	31912891	31912893	100	-	.	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 593 591 .
Chr1	stalkie_big_nohaplotig	exon	31925760	31925767	100	-	.	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 590 583 .
Chr1	stalkie_big_nohaplotig	exon	31930692	31930694	100	-	.	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 582 580 .
Chr1	stalkie_big_nohaplotig	exon	33475880	33475927	54	-	.	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 579 523 .
Chr1	stalkie_big_nohaplotig	exon	33494392	33494401	100	-	.	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 520 511 .
Chr1	stalkie_big_nohaplotig	exon	33497450	33497458	100	-	.	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 510 502 .
Chr1	stalkie_big_nohaplotig	exon	33500826	33500832	100	-	.	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 501 495 .
Chr1	stalkie_big_nohaplotig	exon	33502246	33502307	52	-	.	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 485 428 .
Chr1	stalkie_big_nohaplotig	exon	33595717	33595727	100	-	.	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 423 413 .
Chr1	stalkie_big_nohaplotig	exon	33609396	33609400	100	-	.	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 299 295 .
Chr1	stalkie_big_nohaplotig	exon	33615958	33615961	100	-	.	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 294 291 .
Chr1	stalkie_big_nohaplotig	exon	33628307	33628593	94	-	.	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 290 3 .
Chr1	stalkie_big_nohaplotig	CDS	31925760	31925767	.	-	2	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 590 583 .
Chr1	stalkie_big_nohaplotig	CDS	31930692	31930694	.	-	2	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 582 580 .
Chr1	stalkie_big_nohaplotig	CDS	33475880	33475927	.	-	2	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 579 523 .
Chr1	stalkie_big_nohaplotig	CDS	33494392	33494401	.	-	0	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 520 511 .
Chr1	stalkie_big_nohaplotig	CDS	33497450	33497458	.	-	0	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 510 502 .
Chr1	stalkie_big_nohaplotig	CDS	33500826	33500832	.	-	1	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 501 495 .
Chr1	stalkie_big_nohaplotig	CDS	33502246	33502250	.	-	0	Parent=comp72641_c0_seq1.mrna2;Target=comp72641_c0_seq1 485 481 .
Chr1	stalkie_big_nohaplotig	mRNA	31912783	31915007	.	-	.	ID=FBgn0035707.1.mrna1;geneID=FBgn0035707.1.path1;Name=FBgn0035707.1;Dir=sensecoverage=99.7;identity=99.7;matches=2043;mismatches=6;indels=0;unknowns=0;locus=RLOC_00006948
Chr1	stalkie_big_nohaplotig	exon	31912783	31913360	100	-	.	Parent=FBgn0035707.1.mrna1;Target=FBgn0035707.1 1478 2055 +
Chr1	stalkie_big_nohaplotig	exon	31913420	31914137	99	-	.	Parent=FBgn0035707.1.mrna1;Target=FBgn0035707.1 760 1477 +
Chr1	stalkie_big_nohaplotig	exon	31914204	31914749	99	-	.	Parent=FBgn0035707.1.mrna1;Target=FBgn0035707.1 214 759 +
Chr1	stalkie_big_nohaplotig	exon	31914801	31915007	98	-	.	Parent=FBgn0035707.1.mrna1;Target=FBgn0035707.1 7 213 +
Chr1	stalkie_big_nohaplotig	CDS	31912783	31913360	.	-	2	Parent=FBgn0035707.1.mrna1;Target=FBgn0035707.1 1478 2055 +
Chr1	stalkie_big_nohaplotig	CDS	31913420	31914137	.	-	0	Parent=FBgn0035707.1.mrna1;Target=FBgn0035707.1 760 1477 +
Chr1	stalkie_big_nohaplotig	CDS	31914204	31914749	.	-	0	Parent=FBgn0035707.1.mrna1;Target=FBgn0035707.1 214 759 +
Chr1	stalkie_big_nohaplotig	CDS	31914801	31915007	.	-	0	Parent=FBgn0035707.1.mrna1;Target=FBgn0035707.1 7 213 +
Chr1	gffcl	locus	31917376	31918740	.	+	.	ID=RLOC_00006949;geneIDs=FBgn0030989.1.path1;transcripts=FBgn0030989.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31917376	31918740	.	+	.	ID=FBgn0030989.1.mrna1;geneID=FBgn0030989.1.path1;Name=FBgn0030989.1;Dir=sensecoverage=100.0;identity=99.4;matches=1229;mismatches=4;indels=3;unknowns=0;locus=RLOC_00006949
Chr1	stalkie_big_nohaplotig	exon	31917376	31917955	98	+	.	Parent=FBgn0030989.1.mrna1;Target=FBgn0030989.1 1 583 +
Chr1	stalkie_big_nohaplotig	exon	31918031	31918170	100	+	.	Parent=FBgn0030989.1.mrna1;Target=FBgn0030989.1 584 723 +
Chr1	stalkie_big_nohaplotig	exon	31918228	31918740	99	+	.	Parent=FBgn0030989.1.mrna1;Target=FBgn0030989.1 724 1236 +
Chr1	stalkie_big_nohaplotig	CDS	31917376	31917955	.	+	0	Parent=FBgn0030989.1.mrna1;Target=FBgn0030989.1 1 583 +
Chr1	stalkie_big_nohaplotig	CDS	31918031	31918170	.	+	2	Parent=FBgn0030989.1.mrna1;Target=FBgn0030989.1 584 723 +
Chr1	stalkie_big_nohaplotig	CDS	31918228	31918740	.	+	0	Parent=FBgn0030989.1.mrna1;Target=FBgn0030989.1 724 1236 +
Chr1	gffcl	locus	31922661	31923907	.	+	.	ID=RLOC_00006950;geneIDs=FBgn0030989.2.path1;transcripts=FBgn0030989.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31922661	31923907	.	+	.	ID=FBgn0030989.2.mrna1;geneID=FBgn0030989.2.path1;Name=FBgn0030989.2;Dir=sensecoverage=100.0;identity=99.3;matches=1117;mismatches=8;indels=0;unknowns=0;locus=RLOC_00006950
Chr1	stalkie_big_nohaplotig	exon	31922661	31923105	98	+	.	Parent=FBgn0030989.2.mrna1;Target=FBgn0030989.2 1 445 +
Chr1	stalkie_big_nohaplotig	exon	31923164	31923306	99	+	.	Parent=FBgn0030989.2.mrna1;Target=FBgn0030989.2 446 588 +
Chr1	stalkie_big_nohaplotig	exon	31923371	31923907	99	+	.	Parent=FBgn0030989.2.mrna1;Target=FBgn0030989.2 589 1125 +
Chr1	stalkie_big_nohaplotig	CDS	31922661	31923105	.	+	0	Parent=FBgn0030989.2.mrna1;Target=FBgn0030989.2 1 445 +
Chr1	stalkie_big_nohaplotig	CDS	31923164	31923306	.	+	2	Parent=FBgn0030989.2.mrna1;Target=FBgn0030989.2 446 588 +
Chr1	stalkie_big_nohaplotig	CDS	31923371	31923907	.	+	0	Parent=FBgn0030989.2.mrna1;Target=FBgn0030989.2 589 1125 +
Chr1	gffcl	locus	31926606	31926895	.	+	.	ID=RLOC_00006951;geneIDs=comp146418_c0_seq1.path1;transcripts=comp146418_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31926606	31926895	.	+	.	ID=comp146418_c0_seq1.mrna1;geneID=comp146418_c0_seq1.path1;Name=comp146418_c0_seq1;Dir=indeterminatecoverage=91.5;identity=100.0;matches=290;mismatches=0;indels=0;unknowns=0;Target=comp146418_c0_seq1 316 27 .;CDS_Target=comp146418_c0_seq1 99 28 .;locus=RLOC_00006951
Chr1	stalkie_big_nohaplotig	exon	31926606	31926895	100	+	.	Parent=comp146418_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	31926607	31926678	.	+	0	Parent=comp146418_c0_seq1.mrna1
Chr1	gffcl	locus	31929362	31937766	.	+	.	ID=RLOC_00006952;geneIDs=FBgn0002926.path1;transcripts=FBgn0002926.mrna1,FBgn0002926.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31929362	31937766	.	+	.	ID=FBgn0002926.mrna1;geneID=FBgn0002926.path1;Name=FBgn0002926;Dir=sensecoverage=99.3;identity=97.8;matches=2390;mismatches=54;indels=0;unknowns=0;locus=RLOC_00006952
Chr1	stalkie_big_nohaplotig	exon	31929362	31929425	100	+	.	Parent=FBgn0002926.mrna1;Target=FBgn0002926 1 64 +
Chr1	stalkie_big_nohaplotig	exon	31932157	31932294	99	+	.	Parent=FBgn0002926.mrna1;Target=FBgn0002926 65 202 +
Chr1	stalkie_big_nohaplotig	exon	31932357	31934231	97	+	.	Parent=FBgn0002926.mrna1;Target=FBgn0002926 203 2077 +
Chr1	stalkie_big_nohaplotig	exon	31934287	31934728	99	+	.	Parent=FBgn0002926.mrna1;Target=FBgn0002926 3 95 +
Chr1	stalkie_big_nohaplotig	exon	31934780	31935422	98	+	.	Parent=FBgn0002926.mrna1;Target=FBgn0002926 96 738 +
Chr1	stalkie_big_nohaplotig	exon	31935487	31935969	99	+	.	Parent=FBgn0002926.mrna1;Target=FBgn0002926 739 1221 +
Chr1	stalkie_big_nohaplotig	exon	31936034	31936367	98	+	.	Parent=FBgn0002926.mrna1;Target=FBgn0002926 1222 1555 +
Chr1	stalkie_big_nohaplotig	exon	31936421	31937603	98	+	.	Parent=FBgn0002926.mrna1;Target=FBgn0002926 1556 2738 +
Chr1	stalkie_big_nohaplotig	exon	31937661	31937766	99	+	.	Parent=FBgn0002926.mrna1;Target=FBgn0002926 2739 2844 +
Chr1	stalkie_big_nohaplotig	CDS	31929362	31929425	100	+	0	Parent=FBgn0002926.mrna1;Target=FBgn0002926 1 64 +
Chr1	stalkie_big_nohaplotig	CDS	31932157	31932294	99	+	1	Parent=FBgn0002926.mrna1;Target=FBgn0002926 65 202 +
Chr1	stalkie_big_nohaplotig	CDS	31932357	31934231	97	+	1	Parent=FBgn0002926.mrna1;Target=FBgn0002926 203 2077 +
Chr1	stalkie_big_nohaplotig	CDS	31934287	31934651	99	+	1	Parent=FBgn0002926.mrna1;Target=FBgn0002926 2078 2442 +
Chr1	stalkie_big_nohaplotig	CDS	31934637	31934728	100	+	0	Parent=FBgn0002926.mrna1;Target=FBgn0002926 4 95 +
Chr1	stalkie_big_nohaplotig	CDS	31934780	31935422	98	+	2	Parent=FBgn0002926.mrna1;Target=FBgn0002926 96 738 +
Chr1	stalkie_big_nohaplotig	CDS	31935487	31935969	99	+	0	Parent=FBgn0002926.mrna1;Target=FBgn0002926 739 1221 +
Chr1	stalkie_big_nohaplotig	CDS	31936034	31936367	98	+	0	Parent=FBgn0002926.mrna1;Target=FBgn0002926 1222 1555 +
Chr1	stalkie_big_nohaplotig	CDS	31936421	31937603	98	+	1	Parent=FBgn0002926.mrna1;Target=FBgn0002926 1556 2738 +
Chr1	stalkie_big_nohaplotig	CDS	31937661	31937766	99	+	2	Parent=FBgn0002926.mrna1;Target=FBgn0002926 2739 2844 +
Chr1	stalkie_big_nohaplotig	mRNA	31934636	31937766	.	+	.	ID=FBgn0002926.mrna1;geneID=FBgn0002926.path1;Name=FBgn0002926;Dir=sensecoverage=99.9;identity=98.7;matches=2802;mismatches=37;indels=0;unknowns=3;locus=RLOC_00006952
Chr1	stalkie_big_nohaplotig	exon	31934636	31937766	.	+	.	Parent=FBgn0002926.mrna1
Chr1	gffcl	locus	31944243	31944787	.	+	.	ID=RLOC_00006953;geneIDs=comp154070_c0_seq1.path1;transcripts=comp154070_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	31944243	31944787	.	+	.	ID=comp154070_c0_seq1.mrna1;geneID=comp154070_c0_seq1.path1;Name=comp154070_c0_seq1;Dir=indeterminatecoverage=99.0;identity=95.2;matches=541;mismatches=3;indels=24;unknowns=0;Target=comp154070_c0_seq1 567 1 .;CDS_Target=comp154070_c0_seq1 357 292 .;locus=RLOC_00006953
Chr1	stalkie_big_nohaplotig	exon	31944243	31944787	95	+	.	Parent=comp154070_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	31944512	31944577	.	+	0	Parent=comp154070_c0_seq1.mrna1
Chr1	gffcl	locus	31950693	31971951	.	-	.	ID=RLOC_00006954;geneIDs=FBgn0042185.1.path2;transcripts=FBgn0042185.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	31950693	31971951	.	-	.	ID=FBgn0042185.1.mrna2;geneID=FBgn0042185.1.path2;Name=FBgn0042185.1;Dir=sensecoverage=74.5;identity=99.7;matches=789;mismatches=1;indels=1;unknowns=0;locus=RLOC_00006954
Chr1	stalkie_big_nohaplotig	exon	31950693	31950778	98	-	.	Parent=FBgn0042185.1.mrna2;Target=FBgn0042185.1 976 1062 +
Chr1	stalkie_big_nohaplotig	exon	31951024	31951129	100	-	.	Parent=FBgn0042185.1.mrna2;Target=FBgn0042185.1 870 975 +
Chr1	stalkie_big_nohaplotig	exon	31953579	31953810	100	-	.	Parent=FBgn0042185.1.mrna2;Target=FBgn0042185.1 638 869 +
Chr1	stalkie_big_nohaplotig	exon	31971515	31971745	100	-	.	Parent=FBgn0042185.1.mrna2;Target=FBgn0042185.1 407 637 +
Chr1	stalkie_big_nohaplotig	exon	31971817	31971951	99	-	.	Parent=FBgn0042185.1.mrna2;Target=FBgn0042185.1 272 406 +
Chr1	stalkie_big_nohaplotig	CDS	31950693	31950778	.	-	2	Parent=FBgn0042185.1.mrna2;Target=FBgn0042185.1 976 1062 +
Chr1	stalkie_big_nohaplotig	CDS	31951024	31951129	.	-	0	Parent=FBgn0042185.1.mrna2;Target=FBgn0042185.1 870 975 +
Chr1	stalkie_big_nohaplotig	CDS	31953579	31953810	.	-	1	Parent=FBgn0042185.1.mrna2;Target=FBgn0042185.1 638 869 +
Chr1	stalkie_big_nohaplotig	CDS	31971515	31971745	.	-	1	Parent=FBgn0042185.1.mrna2;Target=FBgn0042185.1 407 637 +
Chr1	stalkie_big_nohaplotig	CDS	31971817	31971951	.	-	1	Parent=FBgn0042185.1.mrna2;Target=FBgn0042185.1 272 406 +
Chr1	gffcl	locus	32036230	32038528	.	-	.	ID=RLOC_00006956;geneIDs=ORF2312.path1;transcripts=ORF2312.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32036230	32038528	.	-	.	ID=ORF2312.mrna1;geneID=ORF2312.path1;Name=ORF2312;Dir=sensecoverage=100.0;identity=97.6;matches=858;mismatches=21;indels=0;unknowns=0;locus=RLOC_00006956
Chr1	stalkie_big_nohaplotig	exon	32036230	32036957	97	-	.	Parent=ORF2312.mrna1;Target=ORF2312 152 879 +
Chr1	stalkie_big_nohaplotig	exon	32038378	32038528	98	-	.	Parent=ORF2312.mrna1;Target=ORF2312 1 151 +
Chr1	stalkie_big_nohaplotig	CDS	32036230	32036957	.	-	2	Parent=ORF2312.mrna1;Target=ORF2312 152 879 +
Chr1	stalkie_big_nohaplotig	CDS	32038378	32038528	.	-	0	Parent=ORF2312.mrna1;Target=ORF2312 1 151 +
Chr1	gffcl	locus	32040473	32041259	.	+	.	ID=RLOC_00006957;geneIDs=FBgn0036063.1.path1;transcripts=FBgn0036063.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32040473	32041259	.	+	.	ID=FBgn0036063.1.mrna1;geneID=FBgn0036063.1.path1;Name=FBgn0036063.1;Dir=sensecoverage=100.0;identity=99.0;matches=719;mismatches=7;indels=0;unknowns=0;locus=RLOC_00006957
Chr1	stalkie_big_nohaplotig	exon	32040473	32040805	99	+	.	Parent=FBgn0036063.1.mrna1;Target=FBgn0036063.1 1 333 +
Chr1	stalkie_big_nohaplotig	exon	32040867	32041259	98	+	.	Parent=FBgn0036063.1.mrna1;Target=FBgn0036063.1 334 726 +
Chr1	stalkie_big_nohaplotig	CDS	32040473	32040805	.	+	0	Parent=FBgn0036063.1.mrna1;Target=FBgn0036063.1 1 333 +
Chr1	stalkie_big_nohaplotig	CDS	32040867	32041259	.	+	0	Parent=FBgn0036063.1.mrna1;Target=FBgn0036063.1 334 726 +
Chr1	gffcl	locus	32042947	32044305	.	-	.	ID=RLOC_00006958;geneIDs=FBgn0026404.1.path1;transcripts=FBgn0026404.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32042947	32044305	.	-	.	ID=FBgn0026404.1.mrna1;geneID=FBgn0026404.1.path1;Name=FBgn0026404.1;Dir=sensecoverage=100.0;identity=99.7;matches=1295;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006958
Chr1	stalkie_big_nohaplotig	exon	32042947	32043816	99	-	.	Parent=FBgn0026404.1.mrna1;Target=FBgn0026404.1 430 1299 +
Chr1	stalkie_big_nohaplotig	exon	32043877	32044305	99	-	.	Parent=FBgn0026404.1.mrna1;Target=FBgn0026404.1 1 429 +
Chr1	stalkie_big_nohaplotig	CDS	32042947	32043816	.	-	0	Parent=FBgn0026404.1.mrna1;Target=FBgn0026404.1 430 1299 +
Chr1	stalkie_big_nohaplotig	CDS	32043877	32044305	.	-	0	Parent=FBgn0026404.1.mrna1;Target=FBgn0026404.1 1 429 +
Chr1	gffcl	locus	32048050	32048643	.	+	.	ID=RLOC_00006959;geneIDs=FBgn0263251.1.path1;transcripts=FBgn0263251.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32048050	32048643	.	+	.	ID=FBgn0263251.1.mrna1;geneID=FBgn0263251.1.path1;Name=FBgn0263251.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=593;mismatches=1;indels=0;unknowns=0;Target=FBgn0263251.1 594 1 .;locus=RLOC_00006959
Chr1	stalkie_big_nohaplotig	exon	32048050	32048643	99	+	.	Parent=FBgn0263251.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	32048050	32048643	.	+	0	Parent=FBgn0263251.1.mrna1
Chr1	gffcl	locus	32061867	32062348	.	-	.	ID=RLOC_00006961;geneIDs=comp152975_c0_seq1.path5;transcripts=comp152975_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	32061867	32062348	.	-	.	ID=comp152975_c0_seq1.mrna5;geneID=comp152975_c0_seq1.path5;Name=comp152975_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=477;mismatches=5;indels=0;unknowns=0;Target=comp152975_c0_seq1 482 1 .;CDS_Target=comp152975_c0_seq1 185 63 .;locus=RLOC_00006961
Chr1	stalkie_big_nohaplotig	exon	32061867	32062348	98	-	.	Parent=comp152975_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	32062164	32062286	.	-	0	Parent=comp152975_c0_seq1.mrna5
Chr1	gffcl	locus	32264532	32264583	.	-	.	ID=RLOC_00006962;geneIDs=comp123678_c1_seq1.path1;transcripts=comp123678_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32264532	32264583	.	-	.	ID=comp123678_c1_seq1.mrna1;geneID=comp123678_c1_seq1.path1;Name=comp123678_c1_seq1;Dir=indeterminatecoverage=8.1;identity=94.4;matches=51;mismatches=1;indels=2;unknowns=0;Target=comp123678_c1_seq1 72 19 .;CDS_Target=comp123678_c1_seq1 59 21 .;locus=RLOC_00006962
Chr1	stalkie_big_nohaplotig	exon	32264532	32264583	94	-	.	Parent=comp123678_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	32264545	32264581	.	-	0	Parent=comp123678_c1_seq1.mrna1
Chr1	gffcl	locus	32335164	32336588	.	+	.	ID=RLOC_00006963;geneIDs=FBgn0015805.1.path2;transcripts=FBgn0015805.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	32335164	32336588	.	+	.	ID=FBgn0015805.1.mrna2;geneID=FBgn0015805.1.path2;Name=FBgn0015805.1;Dir=sensecoverage=88.9;identity=99.1;matches=1281;mismatches=12;indels=0;unknowns=0;locus=RLOC_00006963
Chr1	stalkie_big_nohaplotig	exon	32335164	32336095	98	+	.	Parent=FBgn0015805.1.mrna2;Target=FBgn0015805.1 163 1094 +
Chr1	stalkie_big_nohaplotig	exon	32336155	32336456	99	+	.	Parent=FBgn0015805.1.mrna2;Target=FBgn0015805.1 1095 1396 +
Chr1	stalkie_big_nohaplotig	exon	32336530	32336588	100	+	.	Parent=FBgn0015805.1.mrna2;Target=FBgn0015805.1 1397 1455 +
Chr1	stalkie_big_nohaplotig	CDS	32335164	32336095	.	+	0	Parent=FBgn0015805.1.mrna2;Target=FBgn0015805.1 163 1094 +
Chr1	stalkie_big_nohaplotig	CDS	32336155	32336456	.	+	1	Parent=FBgn0015805.1.mrna2;Target=FBgn0015805.1 1095 1396 +
Chr1	stalkie_big_nohaplotig	CDS	32336530	32336588	.	+	2	Parent=FBgn0015805.1.mrna2;Target=FBgn0015805.1 1397 1455 +
Chr1	gffcl	locus	32399639	32400626	.	-	.	ID=RLOC_00006964;geneIDs=comp143365_c0_seq1.path1;transcripts=comp143365_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32399639	32400626	.	-	.	ID=comp143365_c0_seq1.mrna1;geneID=comp143365_c0_seq1.path1;Name=comp143365_c0_seq1;Dir=indeterminatecoverage=99.9;identity=86.7;matches=793;mismatches=23;indels=99;unknowns=0;Target=comp143365_c0_seq1 157 89 .;locus=RLOC_00006964
Chr1	stalkie_big_nohaplotig	exon	32399639	32399953	84	-	.	Parent=comp143365_c0_seq1.mrna1;Target=comp143365_c0_seq1 821 550 .
Chr1	stalkie_big_nohaplotig	exon	32400032	32400626	87	-	.	Parent=comp143365_c0_seq1.mrna1;Target=comp143365_c0_seq1 549 1 .
Chr1	stalkie_big_nohaplotig	CDS	32400470	32400538	.	-	0	Parent=comp143365_c0_seq1.mrna1
Chr1	gffcl	locus	32400823	32402178	.	-	.	ID=RLOC_00006965;geneIDs=comp135219_c0_seq1.path1;transcripts=comp135219_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32400823	32402178	.	-	.	ID=comp135219_c0_seq1.mrna1;geneID=comp135219_c0_seq1.path1;Name=comp135219_c0_seq1;Dir=antisensecoverage=94.6;identity=97.8;matches=408;mismatches=9;indels=0;unknowns=0;locus=RLOC_00006965
Chr1	stalkie_big_nohaplotig	exon	32400823	32401109	98	-	.	Parent=comp135219_c0_seq1.mrna1;Target=comp135219_c0_seq1 20 306 -
Chr1	stalkie_big_nohaplotig	exon	32402049	32402178	96	-	.	Parent=comp135219_c0_seq1.mrna1;Target=comp135219_c0_seq1 307 436 -
Chr1	stalkie_big_nohaplotig	CDS	32400910	32401109	.	-	2	Parent=comp135219_c0_seq1.mrna1;Target=comp135219_c0_seq1 107 306 .
Chr1	stalkie_big_nohaplotig	CDS	32402049	32402130	.	-	0	Parent=comp135219_c0_seq1.mrna1;Target=comp135219_c0_seq1 307 388 .
Chr1	gffcl	locus	32443842	32444496	.	+	.	ID=RLOC_00006967;geneIDs=comp151172_c0_seq1.path1;transcripts=comp151172_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32443842	32444496	.	+	.	ID=comp151172_c0_seq1.mrna1;geneID=comp151172_c0_seq1.path1;Name=comp151172_c0_seq1;Dir=antisensecoverage=92.4;identity=98.1;matches=506;mismatches=7;indels=3;unknowns=0;locus=RLOC_00006967
Chr1	stalkie_big_nohaplotig	exon	32443842	32444083	98	+	.	Parent=comp151172_c0_seq1.mrna1;Target=comp151172_c0_seq1 305 543 -
Chr1	stalkie_big_nohaplotig	exon	32444223	32444496	97	+	.	Parent=comp151172_c0_seq1.mrna1;Target=comp151172_c0_seq1 31 304 -
Chr1	stalkie_big_nohaplotig	CDS	32444002	32444083	.	+	0	Parent=comp151172_c0_seq1.mrna1;Target=comp151172_c0_seq1 305 386 .
Chr1	stalkie_big_nohaplotig	CDS	32444223	32444419	.	+	2	Parent=comp151172_c0_seq1.mrna1;Target=comp151172_c0_seq1 108 304 .
Chr1	gffcl	locus	32447276	32447812	.	+	.	ID=RLOC_00006968;geneIDs=comp149404_c0_seq1.path1;transcripts=comp149404_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32447276	32447812	.	+	.	ID=comp149404_c0_seq1.mrna1;geneID=comp149404_c0_seq1.path1;Name=comp149404_c0_seq1;Dir=sensecoverage=99.6;identity=99.6;matches=477;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006968
Chr1	stalkie_big_nohaplotig	exon	32447276	32447437	98	+	.	Parent=comp149404_c0_seq1.mrna1;Target=comp149404_c0_seq1 3 164 +
Chr1	stalkie_big_nohaplotig	exon	32447496	32447812	100	+	.	Parent=comp149404_c0_seq1.mrna1;Target=comp149404_c0_seq1 165 481 +
Chr1	stalkie_big_nohaplotig	CDS	32447356	32447437	.	+	0	Parent=comp149404_c0_seq1.mrna1;Target=comp149404_c0_seq1 83 164 +
Chr1	stalkie_big_nohaplotig	CDS	32447496	32447701	.	+	2	Parent=comp149404_c0_seq1.mrna1;Target=comp149404_c0_seq1 165 370 +
Chr1	gffcl	locus	32450733	32451394	.	-	.	ID=RLOC_00006969;geneIDs=comp151172_c0_seq1.path2;transcripts=comp151172_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	32450733	32451394	.	-	.	ID=comp151172_c0_seq1.mrna2;geneID=comp151172_c0_seq1.path2;Name=comp151172_c0_seq1;Dir=antisensecoverage=94.2;identity=97.9;matches=512;mismatches=11;indels=0;unknowns=0;locus=RLOC_00006969
Chr1	stalkie_big_nohaplotig	exon	32450733	32451004	97	-	.	Parent=comp151172_c0_seq1.mrna2;Target=comp151172_c0_seq1 33 304 -
Chr1	stalkie_big_nohaplotig	exon	32451144	32451394	98	-	.	Parent=comp151172_c0_seq1.mrna2;Target=comp151172_c0_seq1 305 555 -
Chr1	stalkie_big_nohaplotig	CDS	32450808	32451004	.	-	2	Parent=comp151172_c0_seq1.mrna2;Target=comp151172_c0_seq1 108 304 .
Chr1	stalkie_big_nohaplotig	CDS	32451144	32451225	.	-	0	Parent=comp151172_c0_seq1.mrna2;Target=comp151172_c0_seq1 305 386 .
Chr1	gffcl	locus	32456503	32458279	.	+	.	ID=RLOC_00006970;geneIDs=comp139160_c0_seq1.path1;transcripts=comp139160_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32456503	32458279	.	+	.	ID=comp139160_c0_seq1.mrna1;geneID=comp139160_c0_seq1.path1;Name=comp139160_c0_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=297;mismatches=2;indels=0;unknowns=0;locus=RLOC_00006970
Chr1	stalkie_big_nohaplotig	exon	32456503	32456568	100	+	.	Parent=comp139160_c0_seq1.mrna1;Target=comp139160_c0_seq1 234 299 -
Chr1	stalkie_big_nohaplotig	exon	32458047	32458279	99	+	.	Parent=comp139160_c0_seq1.mrna1;Target=comp139160_c0_seq1 1 233 -
Chr1	stalkie_big_nohaplotig	CDS	32456505	32456568	.	+	0	Parent=comp139160_c0_seq1.mrna1;Target=comp139160_c0_seq1 234 297 .
Chr1	stalkie_big_nohaplotig	CDS	32458047	32458246	.	+	2	Parent=comp139160_c0_seq1.mrna1;Target=comp139160_c0_seq1 34 233 .
Chr1	gffcl	locus	32461737	32462220	.	+	.	ID=RLOC_00006971;geneIDs=comp118092_c0_seq1.path1;transcripts=comp118092_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32461737	32462220	.	+	.	ID=comp118092_c0_seq1.mrna1;geneID=comp118092_c0_seq1.path1;Name=comp118092_c0_seq1;Dir=indeterminatecoverage=89.2;identity=99.4;matches=484;mismatches=0;indels=3;unknowns=0;Target=comp118092_c0_seq1 487 1 .;CDS_Target=comp118092_c0_seq1 113 3 .;locus=RLOC_00006971
Chr1	stalkie_big_nohaplotig	exon	32461737	32462220	99	+	.	Parent=comp118092_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	32461739	32461849	.	+	0	Parent=comp118092_c0_seq1.mrna1
Chr1	gffcl	locus	32464634	32470494	.	-	.	ID=RLOC_00006972;geneIDs=FBgn0036640.1.path1;transcripts=FBgn0036640.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32464634	32470494	.	-	.	ID=FBgn0036640.1.mrna1;geneID=FBgn0036640.1.path1;Name=FBgn0036640.1;Dir=sensecoverage=100.0;identity=100.0;matches=2553;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006972
Chr1	stalkie_big_nohaplotig	exon	32464634	32464745	100	-	.	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 2442 2553 +
Chr1	stalkie_big_nohaplotig	exon	32465589	32465791	100	-	.	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 2239 2441 +
Chr1	stalkie_big_nohaplotig	exon	32465857	32465976	100	-	.	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 2119 2238 +
Chr1	stalkie_big_nohaplotig	exon	32466508	32466755	100	-	.	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 1871 2118 +
Chr1	stalkie_big_nohaplotig	exon	32466815	32466956	100	-	.	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 1729 1870 +
Chr1	stalkie_big_nohaplotig	exon	32467021	32467358	100	-	.	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 1391 1728 +
Chr1	stalkie_big_nohaplotig	exon	32467413	32467704	100	-	.	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 1099 1390 +
Chr1	stalkie_big_nohaplotig	exon	32468410	32468511	100	-	.	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 997 1098 +
Chr1	stalkie_big_nohaplotig	exon	32468650	32468796	100	-	.	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 850 996 +
Chr1	stalkie_big_nohaplotig	exon	32468868	32469005	100	-	.	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 712 849 +
Chr1	stalkie_big_nohaplotig	exon	32469722	32470168	100	-	.	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 265 711 +
Chr1	stalkie_big_nohaplotig	exon	32470231	32470494	100	-	.	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 1 264 +
Chr1	stalkie_big_nohaplotig	CDS	32464634	32464745	.	-	1	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 2442 2553 +
Chr1	stalkie_big_nohaplotig	CDS	32465589	32465791	.	-	0	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 2239 2441 +
Chr1	stalkie_big_nohaplotig	CDS	32465857	32465976	.	-	0	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 2119 2238 +
Chr1	stalkie_big_nohaplotig	CDS	32466508	32466755	.	-	2	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 1871 2118 +
Chr1	stalkie_big_nohaplotig	CDS	32466815	32466956	.	-	0	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 1729 1870 +
Chr1	stalkie_big_nohaplotig	CDS	32467021	32467358	.	-	2	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 1391 1728 +
Chr1	stalkie_big_nohaplotig	CDS	32467413	32467704	.	-	0	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 1099 1390 +
Chr1	stalkie_big_nohaplotig	CDS	32468410	32468511	.	-	0	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 997 1098 +
Chr1	stalkie_big_nohaplotig	CDS	32468650	32468796	.	-	0	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 850 996 +
Chr1	stalkie_big_nohaplotig	CDS	32468868	32469005	.	-	0	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 712 849 +
Chr1	stalkie_big_nohaplotig	CDS	32469722	32470168	.	-	0	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 265 711 +
Chr1	stalkie_big_nohaplotig	CDS	32470231	32470494	.	-	0	Parent=FBgn0036640.1.mrna1;Target=FBgn0036640.1 1 264 +
Chr1	gffcl	locus	32489110	32490501	.	-	.	ID=RLOC_00006973;geneIDs=FBgn0260635.1.path1;transcripts=FBgn0260635.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32489110	32490501	.	-	.	ID=FBgn0260635.1.mrna1;geneID=FBgn0260635.1.path1;Name=FBgn0260635.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1390;mismatches=2;indels=0;unknowns=0;Target=FBgn0260635.1 1392 1 .;locus=RLOC_00006973
Chr1	stalkie_big_nohaplotig	exon	32489110	32490501	99	-	.	Parent=FBgn0260635.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	32489110	32490501	.	-	0	Parent=FBgn0260635.1.mrna1
Chr1	gffcl	locus	32490513	32500388	.	-	.	ID=RLOC_00006974;geneIDs=comp148473_c1_seq1.path1;transcripts=comp148473_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32490513	32500388	.	-	.	ID=comp148473_c1_seq1.mrna1;geneID=comp148473_c1_seq1.path1;Name=comp148473_c1_seq1;Dir=antisensecoverage=100.0;identity=95.9;matches=536;mismatches=14;indels=9;unknowns=0;Target=comp148473_c1_seq1 335 388 .;locus=RLOC_00006974
Chr1	stalkie_big_nohaplotig	exon	32490513	32490532	100	-	.	Parent=comp148473_c1_seq1.mrna1;Target=comp148473_c1_seq1 1 20 -
Chr1	stalkie_big_nohaplotig	exon	32499851	32500388	95	-	.	Parent=comp148473_c1_seq1.mrna1;Target=comp148473_c1_seq1 21 551 -
Chr1	stalkie_big_nohaplotig	CDS	32500173	32500225	.	-	0	Parent=comp148473_c1_seq1.mrna1
Chr1	gffcl	locus	32533420	32534523	.	-	.	ID=RLOC_00006975;geneIDs=comp147570_c0_seq1.path1;transcripts=comp147570_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32533420	32534523	.	-	.	ID=comp147570_c0_seq1.mrna1;geneID=comp147570_c0_seq1.path1;Name=comp147570_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1091;mismatches=13;indels=0;unknowns=0;Target=comp147570_c0_seq1 1104 1 .;CDS_Target=comp147570_c0_seq1 1035 973 .;locus=RLOC_00006975
Chr1	stalkie_big_nohaplotig	exon	32533420	32534523	98	-	.	Parent=comp147570_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	32533489	32533551	.	-	0	Parent=comp147570_c0_seq1.mrna1
Chr1	gffcl	locus	32535596	32602170	.	+	.	ID=RLOC_00006976;geneIDs=FBgn0005536.1.path1,comp135116_c0_seq1.path1;transcripts=FBgn0005536.1.mrna1,comp135116_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32535596	32602170	.	+	.	ID=FBgn0005536.1.mrna1;geneID=FBgn0005536.1.path1;Name=FBgn0005536.1;Dir=sensecoverage=100.0;identity=99.4;matches=3848;mismatches=16;indels=9;unknowns=0;locus=RLOC_00006976
Chr1	stalkie_big_nohaplotig	exon	32535596	32535859	99	+	.	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 1 264 +
Chr1	stalkie_big_nohaplotig	exon	32566458	32566570	100	+	.	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 265 377 +
Chr1	stalkie_big_nohaplotig	exon	32566717	32567017	99	+	.	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 378 678 +
Chr1	stalkie_big_nohaplotig	exon	32568659	32568912	99	+	.	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 679 932 +
Chr1	stalkie_big_nohaplotig	exon	32568985	32569082	100	+	.	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 933 1030 +
Chr1	stalkie_big_nohaplotig	exon	32570356	32570481	99	+	.	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 1031 1156 +
Chr1	stalkie_big_nohaplotig	exon	32570560	32570656	100	+	.	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 1157 1253 +
Chr1	stalkie_big_nohaplotig	exon	32572971	32573225	100	+	.	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 1254 1508 +
Chr1	stalkie_big_nohaplotig	exon	32573455	32573562	100	+	.	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 1509 1616 +
Chr1	stalkie_big_nohaplotig	exon	32576599	32576776	98	+	.	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 1617 1794 +
Chr1	stalkie_big_nohaplotig	exon	32578505	32579584	99	+	.	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 1795 2874 +
Chr1	stalkie_big_nohaplotig	exon	32583259	32583397	100	+	.	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 2875 3013 +
Chr1	stalkie_big_nohaplotig	exon	32583474	32583734	95	+	.	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 3014 3283 +
Chr1	stalkie_big_nohaplotig	exon	32583806	32583906	100	+	.	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 3284 3384 +
Chr1	stalkie_big_nohaplotig	exon	32584021	32584071	100	+	.	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 3385 3435 +
Chr1	stalkie_big_nohaplotig	exon	32596591	32596736	100	+	.	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 3436 3581 +
Chr1	stalkie_big_nohaplotig	exon	32597844	32597934	100	+	.	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 3582 3672 +
Chr1	stalkie_big_nohaplotig	exon	32598474	32598560	100	+	.	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 3673 3759 +
Chr1	stalkie_big_nohaplotig	exon	32602057	32602170	100	+	.	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 3760 3873 +
Chr1	stalkie_big_nohaplotig	CDS	32535596	32535859	.	+	0	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 1 264 +
Chr1	stalkie_big_nohaplotig	CDS	32566458	32566570	.	+	0	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 265 377 +
Chr1	stalkie_big_nohaplotig	CDS	32566717	32567017	.	+	1	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 378 678 +
Chr1	stalkie_big_nohaplotig	CDS	32568659	32568912	.	+	0	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 679 932 +
Chr1	stalkie_big_nohaplotig	CDS	32568985	32569082	.	+	1	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 933 1030 +
Chr1	stalkie_big_nohaplotig	CDS	32570356	32570481	.	+	2	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 1031 1156 +
Chr1	stalkie_big_nohaplotig	CDS	32570560	32570656	.	+	2	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 1157 1253 +
Chr1	stalkie_big_nohaplotig	CDS	32572971	32573225	.	+	1	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 1254 1508 +
Chr1	stalkie_big_nohaplotig	CDS	32573455	32573562	.	+	1	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 1509 1616 +
Chr1	stalkie_big_nohaplotig	CDS	32576599	32576776	.	+	1	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 1617 1794 +
Chr1	stalkie_big_nohaplotig	CDS	32578505	32579584	.	+	0	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 1795 2874 +
Chr1	stalkie_big_nohaplotig	CDS	32583259	32583397	.	+	0	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 2875 3013 +
Chr1	stalkie_big_nohaplotig	CDS	32583474	32583734	.	+	2	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 3014 3283 +
Chr1	stalkie_big_nohaplotig	CDS	32583806	32583906	.	+	2	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 3284 3384 +
Chr1	stalkie_big_nohaplotig	CDS	32584021	32584071	.	+	0	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 3385 3435 +
Chr1	stalkie_big_nohaplotig	CDS	32596591	32596736	.	+	0	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 3436 3581 +
Chr1	stalkie_big_nohaplotig	CDS	32597844	32597934	.	+	1	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 3582 3672 +
Chr1	stalkie_big_nohaplotig	CDS	32598474	32598560	.	+	0	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 3673 3759 +
Chr1	stalkie_big_nohaplotig	CDS	32602057	32602170	.	+	0	Parent=FBgn0005536.1.mrna1;Target=FBgn0005536.1 3760 3873 +
Chr1	stalkie_big_nohaplotig	mRNA	32573539	32576620	.	+	.	ID=comp135116_c0_seq1.mrna1;geneID=comp135116_c0_seq1.path1;Name=comp135116_c0_seq1;Dir=sensecoverage=100.0;identity=98.0;matches=198;mismatches=1;indels=3;unknowns=0;locus=RLOC_00006976
Chr1	stalkie_big_nohaplotig	exon	32573539	32573562	100	+	.	Parent=comp135116_c0_seq1.mrna1;Target=comp135116_c0_seq1 1 24 +
Chr1	stalkie_big_nohaplotig	exon	32573665	32573817	97	+	.	Parent=comp135116_c0_seq1.mrna1;Target=comp135116_c0_seq1 25 180 +
Chr1	stalkie_big_nohaplotig	exon	32576599	32576620	100	+	.	Parent=comp135116_c0_seq1.mrna1;Target=comp135116_c0_seq1 181 202 +
Chr1	stalkie_big_nohaplotig	CDS	32573540	32573562	.	+	0	Parent=comp135116_c0_seq1.mrna1;Target=comp135116_c0_seq1 2 24 +
Chr1	stalkie_big_nohaplotig	CDS	32573665	32573817	.	+	1	Parent=comp135116_c0_seq1.mrna1;Target=comp135116_c0_seq1 25 180 +
Chr1	stalkie_big_nohaplotig	CDS	32576599	32576620	.	+	1	Parent=comp135116_c0_seq1.mrna1;Target=comp135116_c0_seq1 181 202 +
Chr1	gffcl	locus	32540167	32540410	.	-	.	ID=RLOC_00006977;geneIDs=comp118420_c0_seq1.path1;transcripts=comp118420_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32540167	32540410	.	-	.	ID=comp118420_c0_seq1.mrna1;geneID=comp118420_c0_seq1.path1;Name=comp118420_c0_seq1;Dir=indeterminatecoverage=100.0;identity=81.1;matches=198;mismatches=3;indels=43;unknowns=0;Target=comp118420_c0_seq1 201 1 .;CDS_Target=comp118420_c0_seq1 30 1 .;locus=RLOC_00006977
Chr1	stalkie_big_nohaplotig	exon	32540167	32540410	81	-	.	Parent=comp118420_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	32540381	32540410	.	-	0	Parent=comp118420_c0_seq1.mrna1
Chr1	gffcl	locus	32591501	32591923	.	-	.	ID=RLOC_00006978;geneIDs=comp145463_c0_seq1.path1;transcripts=comp145463_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32591501	32591923	.	-	.	ID=comp145463_c0_seq1.mrna1;geneID=comp145463_c0_seq1.path1;Name=comp145463_c0_seq1;Dir=indeterminatecoverage=97.7;identity=95.8;matches=412;mismatches=4;indels=14;unknowns=0;Target=comp145463_c0_seq1 426 4 .;CDS_Target=comp145463_c0_seq1 92 6 .;locus=RLOC_00006978
Chr1	stalkie_big_nohaplotig	exon	32591501	32591923	95	-	.	Parent=comp145463_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	32591835	32591921	.	-	0	Parent=comp145463_c0_seq1.mrna1
Chr1	gffcl	locus	32593819	32594108	.	+	.	ID=RLOC_00006979;geneIDs=comp154745_c0_seq1.path1;transcripts=comp154745_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32593819	32594108	.	+	.	ID=comp154745_c0_seq1.mrna1;geneID=comp154745_c0_seq1.path1;Name=comp154745_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=288;mismatches=2;indels=0;unknowns=0;Target=comp154745_c0_seq1 290 1 .;CDS_Target=comp154745_c0_seq1 78 34 .;locus=RLOC_00006979
Chr1	stalkie_big_nohaplotig	exon	32593819	32594108	99	+	.	Parent=comp154745_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	32593852	32593896	.	+	0	Parent=comp154745_c0_seq1.mrna1
Chr1	gffcl	locus	32594436	32594706	.	+	.	ID=RLOC_00006980;geneIDs=comp134844_c0_seq1.path1;transcripts=comp134844_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32594436	32594706	.	+	.	ID=comp134844_c0_seq1.mrna1;geneID=comp134844_c0_seq1.path1;Name=comp134844_c0_seq1;Dir=indeterminatecoverage=79.5;identity=98.5;matches=267;mismatches=4;indels=0;unknowns=0;Target=comp134844_c0_seq1 341 71 .;CDS_Target=comp134844_c0_seq1 195 118 .;locus=RLOC_00006980
Chr1	stalkie_big_nohaplotig	exon	32594436	32594706	98	+	.	Parent=comp134844_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	32594483	32594560	.	+	0	Parent=comp134844_c0_seq1.mrna1
Chr1	gffcl	locus	32594800	32595422	.	-	.	ID=RLOC_00006981;geneIDs=comp142742_c0_seq1.path1;transcripts=comp142742_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32594800	32595422	.	-	.	ID=comp142742_c0_seq1.mrna1;geneID=comp142742_c0_seq1.path1;Name=comp142742_c0_seq1;Dir=indeterminatecoverage=94.5;identity=98.4;matches=614;mismatches=8;indels=2;unknowns=0;Target=comp142742_c0_seq1 623 1 .;CDS_Target=comp142742_c0_seq1 102 1 .;locus=RLOC_00006981
Chr1	stalkie_big_nohaplotig	exon	32594800	32595422	98	-	.	Parent=comp142742_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	32595321	32595422	.	-	0	Parent=comp142742_c0_seq1.mrna1
Chr1	gffcl	locus	32600846	32601738	.	-	.	ID=RLOC_00006982;geneIDs=comp153236_c2_seq1.path1;transcripts=comp153236_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32600846	32601738	.	-	.	ID=comp153236_c2_seq1.mrna1;geneID=comp153236_c2_seq1.path1;Name=comp153236_c2_seq1;Dir=indeterminatecoverage=100.0;identity=95.8;matches=863;mismatches=30;indels=8;unknowns=0;Target=comp153236_c2_seq1 901 1 .;CDS_Target=comp153236_c2_seq1 884 792 .;locus=RLOC_00006982
Chr1	stalkie_big_nohaplotig	exon	32600846	32601738	95	-	.	Parent=comp153236_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	32600863	32600955	.	-	0	Parent=comp153236_c2_seq1.mrna1
Chr1	gffcl	locus	32602406	32604650	.	+	.	ID=RLOC_00006983;geneIDs=comp162275_c1_seq1.path1;transcripts=comp162275_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32602406	32604650	.	+	.	ID=comp162275_c1_seq1.mrna1;geneID=comp162275_c1_seq1.path1;Name=comp162275_c1_seq1;Dir=indeterminatecoverage=99.4;identity=96.6;matches=2184;mismatches=57;indels=20;unknowns=0;Target=comp162275_c1_seq1 2270 14 .;CDS_Target=comp162275_c1_seq1 1317 1255 .;locus=RLOC_00006983
Chr1	stalkie_big_nohaplotig	exon	32602406	32604650	96	+	.	Parent=comp162275_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	32603636	32603698	.	+	0	Parent=comp162275_c1_seq1.mrna1
Chr1	gffcl	locus	32610843	32611425	.	-	.	ID=RLOC_00006984;geneIDs=comp118297_c0_seq1.path1;transcripts=comp118297_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32610843	32611425	.	-	.	ID=comp118297_c0_seq1.mrna1;geneID=comp118297_c0_seq1.path1;Name=comp118297_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=580;mismatches=1;indels=2;unknowns=0;Target=comp118297_c0_seq1 581 1 .;CDS_Target=comp118297_c0_seq1 304 188 .;locus=RLOC_00006984
Chr1	stalkie_big_nohaplotig	exon	32610843	32611425	99	-	.	Parent=comp118297_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	32611120	32611238	.	-	0	Parent=comp118297_c0_seq1.mrna1
Chr1	gffcl	locus	32611747	32612680	.	-	.	ID=RLOC_00006985;geneIDs=comp163424_c3_seq1.path1;transcripts=comp163424_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32611747	32612680	.	-	.	ID=comp163424_c3_seq1.mrna1;geneID=comp163424_c3_seq1.path1;Name=comp163424_c3_seq1;Dir=indeterminatecoverage=99.8;identity=97.8;matches=919;mismatches=7;indels=14;unknowns=0;Target=comp163424_c3_seq1 932 1 .;CDS_Target=comp163424_c3_seq1 136 62 .;locus=RLOC_00006985
Chr1	stalkie_big_nohaplotig	exon	32611747	32612680	97	-	.	Parent=comp163424_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	32612545	32612619	.	-	0	Parent=comp163424_c3_seq1.mrna1
Chr1	gffcl	locus	32614926	32615853	.	+	.	ID=RLOC_00006986;geneIDs=comp154299_c0_seq1.path1;transcripts=comp154299_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32614926	32615853	.	+	.	ID=comp154299_c0_seq1.mrna1;geneID=comp154299_c0_seq1.path1;Name=comp154299_c0_seq1;Dir=sensecoverage=100.0;identity=98.7;matches=769;mismatches=10;indels=0;unknowns=0;locus=RLOC_00006986
Chr1	stalkie_big_nohaplotig	exon	32614926	32615026	99	+	.	Parent=comp154299_c0_seq1.mrna1;Target=comp154299_c0_seq1 1 101 +
Chr1	stalkie_big_nohaplotig	exon	32615093	32615485	98	+	.	Parent=comp154299_c0_seq1.mrna1;Target=comp154299_c0_seq1 102 494 +
Chr1	stalkie_big_nohaplotig	exon	32615569	32615853	98	+	.	Parent=comp154299_c0_seq1.mrna1;Target=comp154299_c0_seq1 495 779 +
Chr1	stalkie_big_nohaplotig	CDS	32614991	32615026	.	+	0	Parent=comp154299_c0_seq1.mrna1;Target=comp154299_c0_seq1 66 101 +
Chr1	stalkie_big_nohaplotig	CDS	32615093	32615485	.	+	0	Parent=comp154299_c0_seq1.mrna1;Target=comp154299_c0_seq1 102 494 +
Chr1	stalkie_big_nohaplotig	CDS	32615569	32615853	.	+	0	Parent=comp154299_c0_seq1.mrna1;Target=comp154299_c0_seq1 495 779 +
Chr1	gffcl	locus	32619492	32619731	.	+	.	ID=RLOC_00006987;geneIDs=comp3547_c0_seq1.path1;transcripts=comp3547_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32619492	32619731	.	+	.	ID=comp3547_c0_seq1.mrna1;geneID=comp3547_c0_seq1.path1;Name=comp3547_c0_seq1;Dir=indeterminatecoverage=100.0;identity=76.7;matches=184;mismatches=23;indels=33;unknowns=0;Target=comp3547_c0_seq1 207 1 .;CDS_Target=comp3547_c0_seq1 206 3 .;locus=RLOC_00006987
Chr1	stalkie_big_nohaplotig	exon	32619492	32619731	76	+	.	Parent=comp3547_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	32619494	32619730	.	+	0	Parent=comp3547_c0_seq1.mrna1
Chr1	gffcl	locus	32625456	32626130	.	-	.	ID=RLOC_00006989;geneIDs=comp160969_c0_seq1.path1;transcripts=comp160969_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32625456	32626130	.	-	.	ID=comp160969_c0_seq1.mrna1;geneID=comp160969_c0_seq1.path1;Name=comp160969_c0_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=545;mismatches=3;indels=1;unknowns=0;locus=RLOC_00006989
Chr1	stalkie_big_nohaplotig	exon	32625456	32625526	100	-	.	Parent=comp160969_c0_seq1.mrna1;Target=comp160969_c0_seq1 1 71 -
Chr1	stalkie_big_nohaplotig	exon	32625588	32626010	99	-	.	Parent=comp160969_c0_seq1.mrna1;Target=comp160969_c0_seq1 72 494 -
Chr1	stalkie_big_nohaplotig	exon	32626076	32626130	96	-	.	Parent=comp160969_c0_seq1.mrna1;Target=comp160969_c0_seq1 495 548 -
Chr1	stalkie_big_nohaplotig	CDS	32626004	32626010	.	-	0	Parent=comp160969_c0_seq1.mrna1;Target=comp160969_c0_seq1 488 494 .
Chr1	stalkie_big_nohaplotig	CDS	32626076	32626129	.	-	0	Parent=comp160969_c0_seq1.mrna1;Target=comp160969_c0_seq1 495 547 .
Chr1	gffcl	locus	32628424	32629584	.	-	.	ID=RLOC_00006990;geneIDs=ORF2366.path1;transcripts=ORF2366.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32628424	32629584	.	-	.	ID=ORF2366.mrna1;geneID=ORF2366.path1;Name=ORF2366;Dir=sensecoverage=100.0;identity=99.5;matches=866;mismatches=4;indels=0;unknowns=0;locus=RLOC_00006990
Chr1	stalkie_big_nohaplotig	exon	32628424	32628649	100	-	.	Parent=ORF2366.mrna1;Target=ORF2366 645 870 +
Chr1	stalkie_big_nohaplotig	exon	32628718	32628966	99	-	.	Parent=ORF2366.mrna1;Target=ORF2366 396 644 +
Chr1	stalkie_big_nohaplotig	exon	32629071	32629304	98	-	.	Parent=ORF2366.mrna1;Target=ORF2366 162 395 +
Chr1	stalkie_big_nohaplotig	exon	32629364	32629485	100	-	.	Parent=ORF2366.mrna1;Target=ORF2366 40 161 +
Chr1	stalkie_big_nohaplotig	exon	32629546	32629584	100	-	.	Parent=ORF2366.mrna1;Target=ORF2366 1 39 +
Chr1	stalkie_big_nohaplotig	CDS	32628424	32628649	.	-	1	Parent=ORF2366.mrna1;Target=ORF2366 645 870 +
Chr1	stalkie_big_nohaplotig	CDS	32628718	32628966	.	-	1	Parent=ORF2366.mrna1;Target=ORF2366 396 644 +
Chr1	stalkie_big_nohaplotig	CDS	32629071	32629304	.	-	1	Parent=ORF2366.mrna1;Target=ORF2366 162 395 +
Chr1	stalkie_big_nohaplotig	CDS	32629364	32629485	.	-	0	Parent=ORF2366.mrna1;Target=ORF2366 40 161 +
Chr1	stalkie_big_nohaplotig	CDS	32629546	32629584	.	-	0	Parent=ORF2366.mrna1;Target=ORF2366 1 39 +
Chr1	gffcl	locus	32633331	32634248	.	+	.	ID=RLOC_00006991;geneIDs=FBgn0035413.1.path1;transcripts=FBgn0035413.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32633331	32634248	.	+	.	ID=FBgn0035413.1.mrna1;geneID=FBgn0035413.1.path1;Name=FBgn0035413.1;Dir=sensecoverage=100.0;identity=96.2;matches=453;mismatches=13;indels=5;unknowns=0;locus=RLOC_00006991
Chr1	stalkie_big_nohaplotig	exon	32633331	32633360	100	+	.	Parent=FBgn0035413.1.mrna1;Target=FBgn0035413.1 1 30 +
Chr1	stalkie_big_nohaplotig	exon	32633431	32633557	95	+	.	Parent=FBgn0035413.1.mrna1;Target=FBgn0035413.1 31 157 +
Chr1	stalkie_big_nohaplotig	exon	32633622	32633894	96	+	.	Parent=FBgn0035413.1.mrna1;Target=FBgn0035413.1 158 435 +
Chr1	stalkie_big_nohaplotig	exon	32634213	32634248	97	+	.	Parent=FBgn0035413.1.mrna1;Target=FBgn0035413.1 436 471 +
Chr1	stalkie_big_nohaplotig	CDS	32633528	32633557	.	+	0	Parent=FBgn0035413.1.mrna1;Target=FBgn0035413.1 128 157 +
Chr1	stalkie_big_nohaplotig	CDS	32633622	32633700	.	+	0	Parent=FBgn0035413.1.mrna1;Target=FBgn0035413.1 158 241 +
Chr1	gffcl	locus	32637568	32639520	.	+	.	ID=RLOC_00006992;geneIDs=comp161983_c0_seq1.path1;transcripts=comp161983_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32637568	32639520	.	+	.	ID=comp161983_c0_seq1.mrna1;geneID=comp161983_c0_seq1.path1;Name=comp161983_c0_seq1;Dir=antisensecoverage=88.4;identity=94.7;matches=966;mismatches=43;indels=11;unknowns=0;locus=RLOC_00006992
Chr1	stalkie_big_nohaplotig	exon	32637568	32637832	96	+	.	Parent=comp161983_c0_seq1.mrna1;Target=comp161983_c0_seq1 889 1154 -
Chr1	stalkie_big_nohaplotig	exon	32637888	32637947	98	+	.	Parent=comp161983_c0_seq1.mrna1;Target=comp161983_c0_seq1 829 888 -
Chr1	stalkie_big_nohaplotig	exon	32638606	32638672	94	+	.	Parent=comp161983_c0_seq1.mrna1;Target=comp161983_c0_seq1 762 828 -
Chr1	stalkie_big_nohaplotig	exon	32638736	32639046	94	+	.	Parent=comp161983_c0_seq1.mrna1;Target=comp161983_c0_seq1 447 761 -
Chr1	stalkie_big_nohaplotig	exon	32639118	32639275	88	+	.	Parent=comp161983_c0_seq1.mrna1;Target=comp161983_c0_seq1 283 446 -
Chr1	stalkie_big_nohaplotig	exon	32639373	32639520	97	+	.	Parent=comp161983_c0_seq1.mrna1;Target=comp161983_c0_seq1 135 282 -
Chr1	stalkie_big_nohaplotig	CDS	32637821	32637832	.	+	0	Parent=comp161983_c0_seq1.mrna1;Target=comp161983_c0_seq1 889 900 .
Chr1	stalkie_big_nohaplotig	CDS	32637888	32637947	.	+	0	Parent=comp161983_c0_seq1.mrna1;Target=comp161983_c0_seq1 829 888 .
Chr1	stalkie_big_nohaplotig	CDS	32638606	32638672	.	+	0	Parent=comp161983_c0_seq1.mrna1;Target=comp161983_c0_seq1 762 828 .
Chr1	stalkie_big_nohaplotig	CDS	32638736	32638847	.	+	2	Parent=comp161983_c0_seq1.mrna1;Target=comp161983_c0_seq1 646 761 .
Chr1	gffcl	locus	32643019	32644695	.	+	.	ID=RLOC_00006993;geneIDs=comp113400_c0_seq1.path1;transcripts=comp113400_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32643019	32644695	.	+	.	ID=comp113400_c0_seq1.mrna1;geneID=comp113400_c0_seq1.path1;Name=comp113400_c0_seq1;Dir=sensecoverage=89.6;identity=100.0;matches=199;mismatches=0;indels=0;unknowns=0;locus=RLOC_00006993
Chr1	stalkie_big_nohaplotig	exon	32643019	32643143	100	+	.	Parent=comp113400_c0_seq1.mrna1;Target=comp113400_c0_seq1 24 148 +
Chr1	stalkie_big_nohaplotig	exon	32643199	32643258	100	+	.	Parent=comp113400_c0_seq1.mrna1;Target=comp113400_c0_seq1 149 208 +
Chr1	stalkie_big_nohaplotig	exon	32644682	32644695	100	+	.	Parent=comp113400_c0_seq1.mrna1;Target=comp113400_c0_seq1 209 222 +
Chr1	stalkie_big_nohaplotig	CDS	32643132	32643143	.	+	0	Parent=comp113400_c0_seq1.mrna1;Target=comp113400_c0_seq1 137 148 +
Chr1	stalkie_big_nohaplotig	CDS	32643199	32643258	.	+	0	Parent=comp113400_c0_seq1.mrna1;Target=comp113400_c0_seq1 149 208 +
Chr1	stalkie_big_nohaplotig	CDS	32644682	32644693	.	+	0	Parent=comp113400_c0_seq1.mrna1;Target=comp113400_c0_seq1 209 220 +
Chr1	gffcl	locus	32647818	32650654	.	+	.	ID=RLOC_00006994;geneIDs=comp136937_c0_seq1.path1;transcripts=comp136937_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32647818	32650654	.	+	.	ID=comp136937_c0_seq1.mrna1;geneID=comp136937_c0_seq1.path1;Name=comp136937_c0_seq1;Dir=antisensecoverage=91.9;identity=98.7;matches=516;mismatches=7;indels=0;unknowns=0;locus=RLOC_00006994
Chr1	stalkie_big_nohaplotig	exon	32647818	32647845	100	+	.	Parent=comp136937_c0_seq1.mrna1;Target=comp136937_c0_seq1 496 523 -
Chr1	stalkie_big_nohaplotig	exon	32650008	32650074	100	+	.	Parent=comp136937_c0_seq1.mrna1;Target=comp136937_c0_seq1 429 495 -
Chr1	stalkie_big_nohaplotig	exon	32650151	32650464	98	+	.	Parent=comp136937_c0_seq1.mrna1;Target=comp136937_c0_seq1 115 428 -
Chr1	stalkie_big_nohaplotig	exon	32650541	32650654	98	+	.	Parent=comp136937_c0_seq1.mrna1;Target=comp136937_c0_seq1 1 114 -
Chr1	stalkie_big_nohaplotig	CDS	32647819	32647845	.	+	0	Parent=comp136937_c0_seq1.mrna1;Target=comp136937_c0_seq1 496 522 .
Chr1	stalkie_big_nohaplotig	CDS	32650008	32650074	.	+	0	Parent=comp136937_c0_seq1.mrna1;Target=comp136937_c0_seq1 429 495 .
Chr1	stalkie_big_nohaplotig	CDS	32650151	32650464	.	+	2	Parent=comp136937_c0_seq1.mrna1;Target=comp136937_c0_seq1 115 428 .
Chr1	stalkie_big_nohaplotig	CDS	32650541	32650654	.	+	0	Parent=comp136937_c0_seq1.mrna1;Target=comp136937_c0_seq1 1 114 .
Chr1	gffcl	locus	32653384	32654814	.	-	.	ID=RLOC_00006995;geneIDs=FBgn0035414.1.path1;transcripts=FBgn0035414.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32653384	32654814	.	-	.	ID=FBgn0035414.1.mrna1;geneID=FBgn0035414.1.path1;Name=FBgn0035414.1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1417;mismatches=14;indels=0;unknowns=0;Target=FBgn0035414.1 1431 1 .;locus=RLOC_00006995
Chr1	stalkie_big_nohaplotig	exon	32653384	32654814	99	-	.	Parent=FBgn0035414.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	32653384	32654814	.	-	0	Parent=FBgn0035414.1.mrna1
Chr1	gffcl	locus	32659794	32662846	.	+	.	ID=RLOC_00006996;geneIDs=FBgn0016983.1.path1;transcripts=FBgn0016983.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32659794	32662846	.	+	.	ID=FBgn0016983.1.mrna1;geneID=FBgn0016983.1.path1;Name=FBgn0016983.1;Dir=sensecoverage=100.0;identity=99.1;matches=2269;mismatches=17;indels=3;unknowns=1;locus=RLOC_00006996
Chr1	stalkie_big_nohaplotig	exon	32659794	32659859	98	+	.	Parent=FBgn0016983.1.mrna1;Target=FBgn0016983.1 1 67 +
Chr1	stalkie_big_nohaplotig	exon	32659923	32660227	99	+	.	Parent=FBgn0016983.1.mrna1;Target=FBgn0016983.1 68 372 +
Chr1	stalkie_big_nohaplotig	exon	32660294	32661589	99	+	.	Parent=FBgn0016983.1.mrna1;Target=FBgn0016983.1 373 1668 +
Chr1	stalkie_big_nohaplotig	exon	32662098	32662427	99	+	.	Parent=FBgn0016983.1.mrna1;Target=FBgn0016983.1 1669 1998 +
Chr1	stalkie_big_nohaplotig	exon	32662496	32662717	97	+	.	Parent=FBgn0016983.1.mrna1;Target=FBgn0016983.1 1999 2220 +
Chr1	stalkie_big_nohaplotig	exon	32662778	32662846	100	+	.	Parent=FBgn0016983.1.mrna1;Target=FBgn0016983.1 2221 2289 +
Chr1	stalkie_big_nohaplotig	CDS	32659796	32659859	.	+	0	Parent=FBgn0016983.1.mrna1;Target=FBgn0016983.1 3 67 +
Chr1	stalkie_big_nohaplotig	CDS	32659923	32659938	.	+	2	Parent=FBgn0016983.1.mrna1;Target=FBgn0016983.1 68 83 +
Chr1	gffcl	locus	32663615	32666385	.	-	.	ID=RLOC_00006997;geneIDs=FBgn0035776.1.path1;transcripts=FBgn0035776.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32663615	32666385	.	-	.	ID=FBgn0035776.1.mrna1;geneID=FBgn0035776.1.path1;Name=FBgn0035776.1;Dir=sensecoverage=100.0;identity=99.3;matches=1296;mismatches=9;indels=0;unknowns=0;locus=RLOC_00006997
Chr1	stalkie_big_nohaplotig	exon	32663615	32663938	99	-	.	Parent=FBgn0035776.1.mrna1;Target=FBgn0035776.1 982 1305 +
Chr1	stalkie_big_nohaplotig	exon	32664000	32664162	99	-	.	Parent=FBgn0035776.1.mrna1;Target=FBgn0035776.1 819 981 +
Chr1	stalkie_big_nohaplotig	exon	32664232	32664491	100	-	.	Parent=FBgn0035776.1.mrna1;Target=FBgn0035776.1 559 818 +
Chr1	stalkie_big_nohaplotig	exon	32665828	32666385	98	-	.	Parent=FBgn0035776.1.mrna1;Target=FBgn0035776.1 1 558 +
Chr1	stalkie_big_nohaplotig	CDS	32663615	32663938	.	-	0	Parent=FBgn0035776.1.mrna1;Target=FBgn0035776.1 982 1305 +
Chr1	stalkie_big_nohaplotig	CDS	32664000	32664162	.	-	1	Parent=FBgn0035776.1.mrna1;Target=FBgn0035776.1 819 981 +
Chr1	stalkie_big_nohaplotig	CDS	32664232	32664491	.	-	0	Parent=FBgn0035776.1.mrna1;Target=FBgn0035776.1 559 818 +
Chr1	stalkie_big_nohaplotig	CDS	32665828	32666385	.	-	0	Parent=FBgn0035776.1.mrna1;Target=FBgn0035776.1 1 558 +
Chr1	gffcl	locus	32678898	32679616	.	+	.	ID=RLOC_00006998;geneIDs=comp153541_c0_seq1.path1;transcripts=comp153541_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32678898	32679616	.	+	.	ID=comp153541_c0_seq1.mrna1;geneID=comp153541_c0_seq1.path1;Name=comp153541_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.4;matches=709;mismatches=10;indels=9;unknowns=0;Target=comp153541_c0_seq1 728 1 .;CDS_Target=comp153541_c0_seq1 243 175 .;locus=RLOC_00006998
Chr1	stalkie_big_nohaplotig	exon	32678898	32679616	97	+	.	Parent=comp153541_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	32679064	32679132	.	+	0	Parent=comp153541_c0_seq1.mrna1
Chr1	gffcl	locus	32679804	32695102	.	+	.	ID=RLOC_00006999;geneIDs=FBgn0035777.1.path1;transcripts=FBgn0035777.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32679804	32695102	.	+	.	ID=FBgn0035777.1.mrna1;geneID=FBgn0035777.1.path1;Name=FBgn0035777.1;Dir=sensecoverage=100.0;identity=99.3;matches=1266;mismatches=9;indels=0;unknowns=0;locus=RLOC_00006999
Chr1	stalkie_big_nohaplotig	exon	32679804	32679889	98	+	.	Parent=FBgn0035777.1.mrna1;Target=FBgn0035777.1 1 86 +
Chr1	stalkie_big_nohaplotig	exon	32692331	32692537	100	+	.	Parent=FBgn0035777.1.mrna1;Target=FBgn0035777.1 87 293 +
Chr1	stalkie_big_nohaplotig	exon	32692602	32692716	98	+	.	Parent=FBgn0035777.1.mrna1;Target=FBgn0035777.1 294 408 +
Chr1	stalkie_big_nohaplotig	exon	32692822	32693133	99	+	.	Parent=FBgn0035777.1.mrna1;Target=FBgn0035777.1 409 720 +
Chr1	stalkie_big_nohaplotig	exon	32693248	32693358	96	+	.	Parent=FBgn0035777.1.mrna1;Target=FBgn0035777.1 721 831 +
Chr1	stalkie_big_nohaplotig	exon	32694427	32694581	100	+	.	Parent=FBgn0035777.1.mrna1;Target=FBgn0035777.1 832 986 +
Chr1	stalkie_big_nohaplotig	exon	32694756	32694876	99	+	.	Parent=FBgn0035777.1.mrna1;Target=FBgn0035777.1 987 1107 +
Chr1	stalkie_big_nohaplotig	exon	32694935	32695102	100	+	.	Parent=FBgn0035777.1.mrna1;Target=FBgn0035777.1 1108 1275 +
Chr1	stalkie_big_nohaplotig	CDS	32679804	32679889	.	+	0	Parent=FBgn0035777.1.mrna1;Target=FBgn0035777.1 1 86 +
Chr1	stalkie_big_nohaplotig	CDS	32692331	32692537	.	+	1	Parent=FBgn0035777.1.mrna1;Target=FBgn0035777.1 87 293 +
Chr1	stalkie_big_nohaplotig	CDS	32692602	32692716	.	+	1	Parent=FBgn0035777.1.mrna1;Target=FBgn0035777.1 294 408 +
Chr1	stalkie_big_nohaplotig	CDS	32692822	32693133	.	+	0	Parent=FBgn0035777.1.mrna1;Target=FBgn0035777.1 409 720 +
Chr1	stalkie_big_nohaplotig	CDS	32693248	32693358	.	+	0	Parent=FBgn0035777.1.mrna1;Target=FBgn0035777.1 721 831 +
Chr1	stalkie_big_nohaplotig	CDS	32694427	32694581	.	+	0	Parent=FBgn0035777.1.mrna1;Target=FBgn0035777.1 832 986 +
Chr1	stalkie_big_nohaplotig	CDS	32694756	32694876	.	+	1	Parent=FBgn0035777.1.mrna1;Target=FBgn0035777.1 987 1107 +
Chr1	stalkie_big_nohaplotig	CDS	32694935	32695102	.	+	0	Parent=FBgn0035777.1.mrna1;Target=FBgn0035777.1 1108 1275 +
Chr1	gffcl	locus	32698496	32700003	.	+	.	ID=RLOC_00007000;geneIDs=FBgn0035779.1.path1;transcripts=FBgn0035779.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32698496	32700003	.	+	.	ID=FBgn0035779.1.mrna1;geneID=FBgn0035779.1.path1;Name=FBgn0035779.1;Dir=sensecoverage=100.0;identity=99.0;matches=1369;mismatches=14;indels=0;unknowns=0;locus=RLOC_00007000
Chr1	stalkie_big_nohaplotig	exon	32698496	32698650	100	+	.	Parent=FBgn0035779.1.mrna1;Target=FBgn0035779.1 1 155 +
Chr1	stalkie_big_nohaplotig	exon	32698726	32699634	99	+	.	Parent=FBgn0035779.1.mrna1;Target=FBgn0035779.1 156 1064 +
Chr1	stalkie_big_nohaplotig	exon	32699685	32700003	98	+	.	Parent=FBgn0035779.1.mrna1;Target=FBgn0035779.1 1065 1383 +
Chr1	stalkie_big_nohaplotig	CDS	32698496	32698650	.	+	0	Parent=FBgn0035779.1.mrna1;Target=FBgn0035779.1 1 155 +
Chr1	stalkie_big_nohaplotig	CDS	32698726	32699634	.	+	1	Parent=FBgn0035779.1.mrna1;Target=FBgn0035779.1 156 1064 +
Chr1	stalkie_big_nohaplotig	CDS	32699685	32700003	.	+	1	Parent=FBgn0035779.1.mrna1;Target=FBgn0035779.1 1065 1383 +
Chr1	gffcl	locus	32701591	32703055	.	-	.	ID=RLOC_00007001;geneIDs=FBgn0035781.1.path1;transcripts=FBgn0035781.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32701591	32703055	.	-	.	ID=FBgn0035781.1.mrna1;geneID=FBgn0035781.1.path1;Name=FBgn0035781.1;Dir=sensecoverage=99.6;identity=98.9;matches=1283;mismatches=14;indels=0;unknowns=0;locus=RLOC_00007001
Chr1	stalkie_big_nohaplotig	exon	32701591	32701885	97	-	.	Parent=FBgn0035781.1.mrna1;Target=FBgn0035781.1 1008 1302 +
Chr1	stalkie_big_nohaplotig	exon	32701997	32702878	99	-	.	Parent=FBgn0035781.1.mrna1;Target=FBgn0035781.1 126 1007 +
Chr1	stalkie_big_nohaplotig	exon	32702936	32703055	100	-	.	Parent=FBgn0035781.1.mrna1;Target=FBgn0035781.1 6 125 +
Chr1	stalkie_big_nohaplotig	CDS	32701591	32701885	.	-	1	Parent=FBgn0035781.1.mrna1;Target=FBgn0035781.1 1008 1302 +
Chr1	stalkie_big_nohaplotig	CDS	32701997	32702878	.	-	1	Parent=FBgn0035781.1.mrna1;Target=FBgn0035781.1 126 1007 +
Chr1	stalkie_big_nohaplotig	CDS	32702936	32703054	.	-	0	Parent=FBgn0035781.1.mrna1;Target=FBgn0035781.1 7 125 +
Chr1	gffcl	locus	32716376	32716705	.	-	.	ID=RLOC_00007002;geneIDs=comp146244_c0_seq1.path1;transcripts=comp146244_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32716376	32716705	.	-	.	ID=comp146244_c0_seq1.mrna1;geneID=comp146244_c0_seq1.path1;Name=comp146244_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=329;mismatches=1;indels=0;unknowns=0;Target=comp146244_c0_seq1 330 1 .;CDS_Target=comp146244_c0_seq1 182 3 .;locus=RLOC_00007002
Chr1	stalkie_big_nohaplotig	exon	32716376	32716705	99	-	.	Parent=comp146244_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	32716524	32716703	.	-	0	Parent=comp146244_c0_seq1.mrna1
Chr1	gffcl	locus	32722068	32722986	.	+	.	ID=RLOC_00007003;geneIDs=comp144503_c0_seq1.path1;transcripts=comp144503_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32722068	32722986	.	+	.	ID=comp144503_c0_seq1.mrna1;geneID=comp144503_c0_seq1.path1;Name=comp144503_c0_seq1;Dir=antisensecoverage=99.3;identity=99.4;matches=830;mismatches=5;indels=0;unknowns=0;Target=comp144503_c0_seq1 144 371 .;locus=RLOC_00007003
Chr1	stalkie_big_nohaplotig	exon	32722068	32722339	98	+	.	Parent=comp144503_c0_seq1.mrna1;Target=comp144503_c0_seq1 570 841 -
Chr1	stalkie_big_nohaplotig	exon	32722424	32722986	99	+	.	Parent=comp144503_c0_seq1.mrna1;Target=comp144503_c0_seq1 7 569 -
Chr1	stalkie_big_nohaplotig	CDS	32722622	32722849	.	+	0	Parent=comp144503_c0_seq1.mrna1
Chr1	gffcl	locus	32767277	32767862	.	-	.	ID=RLOC_00007004;geneIDs=comp144476_c0_seq1.path1;transcripts=comp144476_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32767277	32767862	.	-	.	ID=comp144476_c0_seq1.mrna1;geneID=comp144476_c0_seq1.path1;Name=comp144476_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.1;matches=581;mismatches=5;indels=0;unknowns=0;Target=comp144476_c0_seq1 586 1 .;CDS_Target=comp144476_c0_seq1 480 136 .;locus=RLOC_00007004
Chr1	stalkie_big_nohaplotig	exon	32767277	32767862	99	-	.	Parent=comp144476_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	32767383	32767727	.	-	0	Parent=comp144476_c0_seq1.mrna1
Chr1	gffcl	locus	32825932	34758582	.	+	.	ID=RLOC_00007005;geneIDs=comp134979_c0_seq1.path1,comp163445_c3_seq1.path1;transcripts=comp163445_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32825932	34758582	.	+	.	ID=comp163445_c3_seq1.mrna1;geneID=comp163445_c3_seq1.path1;Name=comp163445_c3_seq1;Dir=sensecoverage=91.8;identity=93.2;matches=2714;mismatches=98;indels=101;unknowns=0;Target=comp163445_c3_seq1 610 762 +;locus=RLOC_00007005
Chr1	stalkie_big_nohaplotig	exon	32825932	32827371	96	+	.	Parent=comp163445_c3_seq1.mrna1;Target=comp163445_c3_seq1 2 1439 +
Chr1	stalkie_big_nohaplotig	exon	32827456	32828711	91	+	.	Parent=comp163445_c3_seq1.mrna1;Target=comp163445_c3_seq1 1457 2724 +
Chr1	stalkie_big_nohaplotig	exon	34665530	34665539	100	+	.	Parent=comp163445_c3_seq1.mrna1;Target=comp163445_c3_seq1 2725 2734 +
Chr1	stalkie_big_nohaplotig	exon	34668465	34668466	100	+	.	Parent=comp163445_c3_seq1.mrna1;Target=comp163445_c3_seq1 2735 2736 +
Chr1	stalkie_big_nohaplotig	exon	34674755	34674759	100	+	.	Parent=comp163445_c3_seq1.mrna1;Target=comp163445_c3_seq1 2737 2741 +
Chr1	stalkie_big_nohaplotig	exon	34681413	34681426	100	+	.	Parent=comp163445_c3_seq1.mrna1;Target=comp163445_c3_seq1 2742 2755 +
Chr1	stalkie_big_nohaplotig	exon	34681881	34681884	100	+	.	Parent=comp163445_c3_seq1.mrna1;Target=comp163445_c3_seq1 2756 2759 +
Chr1	stalkie_big_nohaplotig	exon	34683329	34683330	100	+	.	Parent=comp163445_c3_seq1.mrna1;Target=comp163445_c3_seq1 2760 2761 +
Chr1	stalkie_big_nohaplotig	exon	34683463	34683464	100	+	.	Parent=comp163445_c3_seq1.mrna1;Target=comp163445_c3_seq1 2762 2763 +
Chr1	stalkie_big_nohaplotig	exon	34683642	34683651	100	+	.	Parent=comp163445_c3_seq1.mrna1;Target=comp163445_c3_seq1 2764 2773 +
Chr1	stalkie_big_nohaplotig	exon	34689382	34689388	100	+	.	Parent=comp163445_c3_seq1.mrna1;Target=comp163445_c3_seq1 2774 2780 +
Chr1	stalkie_big_nohaplotig	exon	34695737	34695743	85	+	.	Parent=comp163445_c3_seq1.mrna1;Target=comp163445_c3_seq1 2781 2787 +
Chr1	stalkie_big_nohaplotig	exon	34727724	34727749	41	+	.	Parent=comp163445_c3_seq1.mrna1;Target=comp163445_c3_seq1 2788 2838 +
Chr1	stalkie_big_nohaplotig	exon	34728521	34728523	100	+	.	Parent=comp163445_c3_seq1.mrna1;Target=comp163445_c3_seq1 2839 2841 +
Chr1	stalkie_big_nohaplotig	exon	34730962	34730968	100	+	.	Parent=comp163445_c3_seq1.mrna1;Target=comp163445_c3_seq1 2842 2848 +
Chr1	stalkie_big_nohaplotig	exon	34738842	34738843	100	+	.	Parent=comp163445_c3_seq1.mrna1;Target=comp163445_c3_seq1 2849 2850 +
Chr1	stalkie_big_nohaplotig	exon	34743181	34743184	100	+	.	Parent=comp163445_c3_seq1.mrna1;Target=comp163445_c3_seq1 2851 2854 +
Chr1	stalkie_big_nohaplotig	exon	34748839	34748841	100	+	.	Parent=comp163445_c3_seq1.mrna1;Target=comp163445_c3_seq1 2855 2857 +
Chr1	stalkie_big_nohaplotig	exon	34751678	34751694	94	+	.	Parent=comp163445_c3_seq1.mrna1;Target=comp163445_c3_seq1 2858 2874 +
Chr1	stalkie_big_nohaplotig	exon	34753213	34753216	100	+	.	Parent=comp163445_c3_seq1.mrna1;Target=comp163445_c3_seq1 2875 2878 +
Chr1	stalkie_big_nohaplotig	exon	34757766	34757779	85	+	.	Parent=comp163445_c3_seq1.mrna1;Target=comp163445_c3_seq1 2879 2892 +
Chr1	stalkie_big_nohaplotig	exon	34758577	34758582	100	+	.	Parent=comp163445_c3_seq1.mrna1;Target=comp163445_c3_seq1 2893 2898 +
Chr1	stalkie_big_nohaplotig	CDS	32826541	32826693	.	+	0	Parent=comp163445_c3_seq1.mrna1
Chr1	gffcl	locus	32851398	34289067	.	+	.	ID=RLOC_00007007;geneIDs=FBgn0036621.1.path1,comp154386_c0_seq1.path2;transcripts=comp154386_c0_seq1.mrna2,FBgn0036621.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32851398	34289067	.	+	.	ID=comp154386_c0_seq1.mrna2;geneID=comp154386_c0_seq1.path2;Name=comp154386_c0_seq1;Dir=sensecoverage=77.0;identity=99.2;matches=2217;mismatches=12;indels=5;unknowns=0;locus=RLOC_00007007
Chr1	stalkie_big_nohaplotig	exon	32851398	32851531	98	+	.	Parent=comp154386_c0_seq1.mrna2;Target=comp154386_c0_seq1 2 136 +
Chr1	stalkie_big_nohaplotig	exon	32851695	32851872	99	+	.	Parent=comp154386_c0_seq1.mrna2;Target=comp154386_c0_seq1 137 314 +
Chr1	stalkie_big_nohaplotig	exon	32855185	32857008	99	+	.	Parent=comp154386_c0_seq1.mrna2;Target=comp154386_c0_seq1 315 2137 +
Chr1	stalkie_big_nohaplotig	exon	34244164	34244167	100	+	.	Parent=comp154386_c0_seq1.mrna2;Target=comp154386_c0_seq1 2138 2141 +
Chr1	stalkie_big_nohaplotig	exon	34251615	34251616	100	+	.	Parent=comp154386_c0_seq1.mrna2;Target=comp154386_c0_seq1 2142 2143 +
Chr1	stalkie_big_nohaplotig	exon	34252223	34252235	100	+	.	Parent=comp154386_c0_seq1.mrna2;Target=comp154386_c0_seq1 2144 2156 +
Chr1	stalkie_big_nohaplotig	exon	34254367	34254372	100	+	.	Parent=comp154386_c0_seq1.mrna2;Target=comp154386_c0_seq1 2157 2162 +
Chr1	stalkie_big_nohaplotig	exon	34256086	34256089	100	+	.	Parent=comp154386_c0_seq1.mrna2;Target=comp154386_c0_seq1 2163 2166 +
Chr1	stalkie_big_nohaplotig	exon	34259366	34259375	100	+	.	Parent=comp154386_c0_seq1.mrna2;Target=comp154386_c0_seq1 2167 2176 +
Chr1	stalkie_big_nohaplotig	exon	34262574	34262576	100	+	.	Parent=comp154386_c0_seq1.mrna2;Target=comp154386_c0_seq1 2177 2179 +
Chr1	stalkie_big_nohaplotig	exon	34276323	34276334	75	+	.	Parent=comp154386_c0_seq1.mrna2;Target=comp154386_c0_seq1 2180 2191 +
Chr1	stalkie_big_nohaplotig	exon	34284311	34284321	90	+	.	Parent=comp154386_c0_seq1.mrna2;Target=comp154386_c0_seq1 2192 2202 +
Chr1	stalkie_big_nohaplotig	exon	34287850	34287872	82	+	.	Parent=comp154386_c0_seq1.mrna2;Target=comp154386_c0_seq1 2203 2224 +
Chr1	stalkie_big_nohaplotig	exon	34289060	34289067	100	+	.	Parent=comp154386_c0_seq1.mrna2;Target=comp154386_c0_seq1 2225 2232 +
Chr1	stalkie_big_nohaplotig	CDS	32851800	32851872	.	+	0	Parent=comp154386_c0_seq1.mrna2;Target=comp154386_c0_seq1 242 314 +
Chr1	stalkie_big_nohaplotig	CDS	32855185	32855777	.	+	2	Parent=comp154386_c0_seq1.mrna2;Target=comp154386_c0_seq1 315 907 +
Chr1	stalkie_big_nohaplotig	mRNA	34277913	34286436	.	+	.	ID=FBgn0036621.1.mrna1;geneID=FBgn0036621.1.path1;Name=FBgn0036621.1;Dir=sensecoverage=100.0;identity=99.9;matches=3948;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007007
Chr1	stalkie_big_nohaplotig	exon	34277913	34277971	100	+	.	Parent=FBgn0036621.1.mrna1;Target=FBgn0036621.1 1 59 +
Chr1	stalkie_big_nohaplotig	exon	34281378	34281540	100	+	.	Parent=FBgn0036621.1.mrna1;Target=FBgn0036621.1 60 222 +
Chr1	stalkie_big_nohaplotig	exon	34281609	34282097	100	+	.	Parent=FBgn0036621.1.mrna1;Target=FBgn0036621.1 223 711 +
Chr1	stalkie_big_nohaplotig	exon	34282153	34285158	99	+	.	Parent=FBgn0036621.1.mrna1;Target=FBgn0036621.1 712 3717 +
Chr1	stalkie_big_nohaplotig	exon	34286203	34286436	99	+	.	Parent=FBgn0036621.1.mrna1;Target=FBgn0036621.1 3718 3951 +
Chr1	stalkie_big_nohaplotig	CDS	34277913	34277971	.	+	0	Parent=FBgn0036621.1.mrna1;Target=FBgn0036621.1 1 59 +
Chr1	stalkie_big_nohaplotig	CDS	34281378	34281540	.	+	1	Parent=FBgn0036621.1.mrna1;Target=FBgn0036621.1 60 222 +
Chr1	stalkie_big_nohaplotig	CDS	34281609	34282097	.	+	0	Parent=FBgn0036621.1.mrna1;Target=FBgn0036621.1 223 711 +
Chr1	stalkie_big_nohaplotig	CDS	34282153	34285158	.	+	0	Parent=FBgn0036621.1.mrna1;Target=FBgn0036621.1 712 3717 +
Chr1	stalkie_big_nohaplotig	CDS	34286203	34286436	.	+	0	Parent=FBgn0036621.1.mrna1;Target=FBgn0036621.1 3718 3951 +
Chr1	gffcl	locus	32859776	32860726	.	-	.	ID=RLOC_00007008;geneIDs=FBgn0036035.1.path1;transcripts=FBgn0036035.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32859776	32860726	.	-	.	ID=FBgn0036035.1.mrna1;geneID=FBgn0036035.1.path1;Name=FBgn0036035.1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=937;mismatches=14;indels=0;unknowns=0;Target=FBgn0036035.1 951 1 .;locus=RLOC_00007008
Chr1	stalkie_big_nohaplotig	exon	32859776	32860726	98	-	.	Parent=FBgn0036035.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	32859776	32860726	.	-	0	Parent=FBgn0036035.1.mrna1
Chr1	gffcl	locus	32862251	32863023	.	+	.	ID=RLOC_00007009;geneIDs=FBgn0035537.1.path2;transcripts=FBgn0035537.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	32862251	32863023	.	+	.	ID=FBgn0035537.1.mrna2;geneID=FBgn0035537.1.path2;Name=FBgn0035537.1;Dir=sensecoverage=100.0;identity=99.4;matches=704;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007009
Chr1	stalkie_big_nohaplotig	exon	32862251	32862650	99	+	.	Parent=FBgn0035537.1.mrna2;Target=FBgn0035537.1 1 400 +
Chr1	stalkie_big_nohaplotig	exon	32862716	32863023	100	+	.	Parent=FBgn0035537.1.mrna2;Target=FBgn0035537.1 401 708 +
Chr1	stalkie_big_nohaplotig	CDS	32862251	32862650	.	+	0	Parent=FBgn0035537.1.mrna2;Target=FBgn0035537.1 1 400 +
Chr1	stalkie_big_nohaplotig	CDS	32862716	32863023	.	+	2	Parent=FBgn0035537.1.mrna2;Target=FBgn0035537.1 401 708 +
Chr1	gffcl	locus	32902025	32902733	.	-	.	ID=RLOC_00007010;geneIDs=comp152652_c1_seq1.path1;transcripts=comp152652_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32902025	32902733	.	-	.	ID=comp152652_c1_seq1.mrna1;geneID=comp152652_c1_seq1.path1;Name=comp152652_c1_seq1;Dir=antisensecoverage=98.8;identity=99.8;matches=651;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007010
Chr1	stalkie_big_nohaplotig	exon	32902025	32902411	100	-	.	Parent=comp152652_c1_seq1.mrna1;Target=comp152652_c1_seq1 9 395 -
Chr1	stalkie_big_nohaplotig	exon	32902469	32902733	99	-	.	Parent=comp152652_c1_seq1.mrna1;Target=comp152652_c1_seq1 396 660 -
Chr1	stalkie_big_nohaplotig	CDS	32902026	32902411	.	-	2	Parent=comp152652_c1_seq1.mrna1;Target=comp152652_c1_seq1 10 395 .
Chr1	stalkie_big_nohaplotig	CDS	32902469	32902625	.	-	0	Parent=comp152652_c1_seq1.mrna1;Target=comp152652_c1_seq1 396 552 .
Chr1	gffcl	locus	32920691	32921654	.	+	.	ID=RLOC_00007011;geneIDs=comp163381_c0_seq1.path1;transcripts=comp163381_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32920691	32921654	.	+	.	ID=comp163381_c0_seq1.mrna1;geneID=comp163381_c0_seq1.path1;Name=comp163381_c0_seq1;Dir=indeterminatecoverage=49.5;identity=97.0;matches=935;mismatches=28;indels=1;unknowns=0;Target=comp163381_c0_seq1 1310 348 .;CDS_Target=comp163381_c0_seq1 1308 973 .;locus=RLOC_00007011
Chr1	stalkie_big_nohaplotig	exon	32920691	32921654	96	+	.	Parent=comp163381_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	32921317	32921652	.	+	0	Parent=comp163381_c0_seq1.mrna1
Chr1	gffcl	locus	32924534	32935871	.	+	.	ID=RLOC_00007012;geneIDs=FBgn0015033.2.path1;transcripts=FBgn0015033.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32924534	32935871	.	+	.	ID=FBgn0015033.2.mrna1;geneID=FBgn0015033.2.path1;Name=FBgn0015033.2;Dir=sensecoverage=95.1;identity=92.6;matches=1125;mismatches=89;indels=1;unknowns=0;locus=RLOC_00007012
Chr1	stalkie_big_nohaplotig	exon	32924534	32924723	100	+	.	Parent=FBgn0015033.2.mrna1;Target=FBgn0015033.2 1 190 +
Chr1	stalkie_big_nohaplotig	exon	32924786	32925021	96	+	.	Parent=FBgn0015033.2.mrna1;Target=FBgn0015033.2 191 426 +
Chr1	stalkie_big_nohaplotig	exon	32931230	32931280	94	+	.	Parent=FBgn0015033.2.mrna1;Target=FBgn0015033.2 427 478 +
Chr1	stalkie_big_nohaplotig	exon	32935020	32935117	100	+	.	Parent=FBgn0015033.2.mrna1;Target=FBgn0015033.2 480 577 +
Chr1	stalkie_big_nohaplotig	exon	32935172	32935241	97	+	.	Parent=FBgn0015033.2.mrna1;Target=FBgn0015033.2 578 647 +
Chr1	stalkie_big_nohaplotig	exon	32935303	32935871	86	+	.	Parent=FBgn0015033.2.mrna1;Target=FBgn0015033.2 648 1216 +
Chr1	stalkie_big_nohaplotig	CDS	32924534	32924723	.	+	0	Parent=FBgn0015033.2.mrna1;Target=FBgn0015033.2 1 190 +
Chr1	stalkie_big_nohaplotig	CDS	32924786	32925021	.	+	2	Parent=FBgn0015033.2.mrna1;Target=FBgn0015033.2 191 426 +
Chr1	stalkie_big_nohaplotig	CDS	32931230	32931280	.	+	0	Parent=FBgn0015033.2.mrna1;Target=FBgn0015033.2 427 478 +
Chr1	stalkie_big_nohaplotig	CDS	32935020	32935117	.	+	0	Parent=FBgn0015033.2.mrna1;Target=FBgn0015033.2 480 577 +
Chr1	stalkie_big_nohaplotig	CDS	32935172	32935241	.	+	1	Parent=FBgn0015033.2.mrna1;Target=FBgn0015033.2 578 647 +
Chr1	stalkie_big_nohaplotig	CDS	32935303	32935870	.	+	0	Parent=FBgn0015033.2.mrna1;Target=FBgn0015033.2 648 1215 +
Chr1	gffcl	locus	32976846	32977689	.	-	.	ID=RLOC_00007013;geneIDs=comp149376_c0_seq1.path1;transcripts=comp149376_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	32976846	32977689	.	-	.	ID=comp149376_c0_seq1.mrna1;geneID=comp149376_c0_seq1.path1;Name=comp149376_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=838;mismatches=4;indels=2;unknowns=0;Target=comp149376_c0_seq1 842 1 .;CDS_Target=comp149376_c0_seq1 842 348 .;locus=RLOC_00007013
Chr1	stalkie_big_nohaplotig	exon	32976846	32977689	99	-	.	Parent=comp149376_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	32976846	32977340	.	-	0	Parent=comp149376_c0_seq1.mrna1
Chr1	gffcl	locus	33004338	33009230	.	-	.	ID=RLOC_00007014;geneIDs=FBgn0035785.1.path1;transcripts=FBgn0035785.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33004338	33009230	.	-	.	ID=FBgn0035785.1.mrna1;geneID=FBgn0035785.1.path1;Name=FBgn0035785.1;Dir=sensecoverage=100.0;identity=99.1;matches=1763;mismatches=16;indels=0;unknowns=0;locus=RLOC_00007014
Chr1	stalkie_big_nohaplotig	exon	33004338	33004587	98	-	.	Parent=FBgn0035785.1.mrna1;Target=FBgn0035785.1 1530 1779 +
Chr1	stalkie_big_nohaplotig	exon	33004997	33005249	98	-	.	Parent=FBgn0035785.1.mrna1;Target=FBgn0035785.1 1277 1529 +
Chr1	stalkie_big_nohaplotig	exon	33005302	33005432	100	-	.	Parent=FBgn0035785.1.mrna1;Target=FBgn0035785.1 1146 1276 +
Chr1	stalkie_big_nohaplotig	exon	33005512	33005651	98	-	.	Parent=FBgn0035785.1.mrna1;Target=FBgn0035785.1 1006 1145 +
Chr1	stalkie_big_nohaplotig	exon	33005712	33005916	98	-	.	Parent=FBgn0035785.1.mrna1;Target=FBgn0035785.1 801 1005 +
Chr1	stalkie_big_nohaplotig	exon	33005978	33006241	99	-	.	Parent=FBgn0035785.1.mrna1;Target=FBgn0035785.1 537 800 +
Chr1	stalkie_big_nohaplotig	exon	33006309	33006569	98	-	.	Parent=FBgn0035785.1.mrna1;Target=FBgn0035785.1 276 536 +
Chr1	stalkie_big_nohaplotig	exon	33008840	33009046	100	-	.	Parent=FBgn0035785.1.mrna1;Target=FBgn0035785.1 69 275 +
Chr1	stalkie_big_nohaplotig	exon	33009163	33009230	98	-	.	Parent=FBgn0035785.1.mrna1;Target=FBgn0035785.1 1 68 +
Chr1	stalkie_big_nohaplotig	CDS	33004338	33004587	.	-	1	Parent=FBgn0035785.1.mrna1;Target=FBgn0035785.1 1530 1779 +
Chr1	stalkie_big_nohaplotig	CDS	33004997	33005249	.	-	2	Parent=FBgn0035785.1.mrna1;Target=FBgn0035785.1 1277 1529 +
Chr1	stalkie_big_nohaplotig	CDS	33005302	33005432	.	-	1	Parent=FBgn0035785.1.mrna1;Target=FBgn0035785.1 1146 1276 +
Chr1	stalkie_big_nohaplotig	CDS	33005512	33005651	.	-	0	Parent=FBgn0035785.1.mrna1;Target=FBgn0035785.1 1006 1145 +
Chr1	stalkie_big_nohaplotig	CDS	33005712	33005916	.	-	1	Parent=FBgn0035785.1.mrna1;Target=FBgn0035785.1 801 1005 +
Chr1	stalkie_big_nohaplotig	CDS	33005978	33006241	.	-	1	Parent=FBgn0035785.1.mrna1;Target=FBgn0035785.1 537 800 +
Chr1	stalkie_big_nohaplotig	CDS	33006309	33006569	.	-	1	Parent=FBgn0035785.1.mrna1;Target=FBgn0035785.1 276 536 +
Chr1	stalkie_big_nohaplotig	CDS	33008840	33009046	.	-	1	Parent=FBgn0035785.1.mrna1;Target=FBgn0035785.1 69 275 +
Chr1	stalkie_big_nohaplotig	CDS	33009163	33009230	.	-	0	Parent=FBgn0035785.1.mrna1;Target=FBgn0035785.1 1 68 +
Chr1	gffcl	locus	33018740	33019553	.	-	.	ID=RLOC_00007015;geneIDs=comp159757_c0_seq1.path1;transcripts=comp159757_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33018740	33019553	.	-	.	ID=comp159757_c0_seq1.mrna1;geneID=comp159757_c0_seq1.path1;Name=comp159757_c0_seq1;Dir=indeterminatecoverage=99.9;identity=93.0;matches=779;mismatches=33;indels=26;unknowns=0;Target=comp159757_c0_seq1 836 1 .;CDS_Target=comp159757_c0_seq1 460 371 .;locus=RLOC_00007015
Chr1	stalkie_big_nohaplotig	exon	33018740	33019553	92	-	.	Parent=comp159757_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	33019099	33019188	.	-	0	Parent=comp159757_c0_seq1.mrna1
Chr1	gffcl	locus	33020130	33040288	.	-	.	ID=RLOC_00007016;geneIDs=comp150547_c0_seq1.path1;transcripts=comp150547_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33020130	33040288	.	-	.	ID=comp150547_c0_seq1.mrna1;geneID=comp150547_c0_seq1.path1;Name=comp150547_c0_seq1;Dir=indeterminatecoverage=95.2;identity=98.1;matches=688;mismatches=5;indels=8;unknowns=0;Target=comp150547_c0_seq1 643 395 .;locus=RLOC_00007016
Chr1	stalkie_big_nohaplotig	exon	33020130	33020804	98	-	.	Parent=comp150547_c0_seq1.mrna1;Target=comp150547_c0_seq1 736 54 .
Chr1	stalkie_big_nohaplotig	exon	33022222	33022223	100	-	.	Parent=comp150547_c0_seq1.mrna1;Target=comp150547_c0_seq1 53 52 .
Chr1	stalkie_big_nohaplotig	exon	33022766	33022772	100	-	.	Parent=comp150547_c0_seq1.mrna1;Target=comp150547_c0_seq1 51 45 .
Chr1	stalkie_big_nohaplotig	exon	33037115	33037120	100	-	.	Parent=comp150547_c0_seq1.mrna1;Target=comp150547_c0_seq1 44 39 .
Chr1	stalkie_big_nohaplotig	exon	33040286	33040288	100	-	.	Parent=comp150547_c0_seq1.mrna1;Target=comp150547_c0_seq1 38 36 .
Chr1	stalkie_big_nohaplotig	CDS	33020223	33020471	.	-	0	Parent=comp150547_c0_seq1.mrna1
Chr1	gffcl	locus	33028169	33029803	.	+	.	ID=RLOC_00007017;geneIDs=ORF587.path1;transcripts=ORF587.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33028169	33029803	.	+	.	ID=ORF587.mrna1;geneID=ORF587.path1;Name=ORF587;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1626;mismatches=9;indels=0;unknowns=0;Target=ORF587 1635 1 .;locus=RLOC_00007017
Chr1	stalkie_big_nohaplotig	exon	33028169	33029803	99	+	.	Parent=ORF587.mrna1
Chr1	stalkie_big_nohaplotig	CDS	33028169	33029803	.	+	0	Parent=ORF587.mrna1
Chr1	gffcl	locus	33043638	33243242	.	.	.	ID=RLOC_00007019;geneIDs=FBgn0028582.1.path1,comp114621_c1_seq1.path1,comp143047_c0_seq1.path1,comp151300_c0_seq1.path1,comp160818_c0_seq1.path1,comp162763_c2_seq1.path1;transcripts=comp143047_c0_seq1.mrna1,comp114621_c1_seq1.mrna1,comp162763_c2_seq1.mrna1,FBgn0028582.1.mrna1,comp160818_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33043638	33243242	.	+	.	ID=comp143047_c0_seq1.mrna1;geneID=comp143047_c0_seq1.path1;Name=comp143047_c0_seq1;Dir=indeterminatecoverage=67.8;identity=93.7;matches=968;mismatches=13;indels=52;unknowns=0;Target=comp143047_c0_seq1 904 881 .;locus=RLOC_00007019
Chr1	stalkie_big_nohaplotig	exon	33043638	33043645	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 431 424 .
Chr1	stalkie_big_nohaplotig	exon	33046656	33046657	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 433 432 .
Chr1	stalkie_big_nohaplotig	exon	33054098	33054104	71	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 440 434 .
Chr1	stalkie_big_nohaplotig	exon	33054948	33054957	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 450 441 .
Chr1	stalkie_big_nohaplotig	exon	33055175	33055181	85	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 457 451 .
Chr1	stalkie_big_nohaplotig	exon	33055335	33055341	85	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 464 458 .
Chr1	stalkie_big_nohaplotig	exon	33062209	33062211	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 467 465 .
Chr1	stalkie_big_nohaplotig	exon	33065309	33065310	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 469 468 .
Chr1	stalkie_big_nohaplotig	exon	33086453	33086454	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 471 470 .
Chr1	stalkie_big_nohaplotig	exon	33092988	33092995	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 479 472 .
Chr1	stalkie_big_nohaplotig	exon	33099403	33099409	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 486 480 .
Chr1	stalkie_big_nohaplotig	exon	33102283	33102285	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 489 487 .
Chr1	stalkie_big_nohaplotig	exon	33109257	33109263	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 496 490 .
Chr1	stalkie_big_nohaplotig	exon	33116864	33116869	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 502 497 .
Chr1	stalkie_big_nohaplotig	exon	33116930	33116934	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 507 503 .
Chr1	stalkie_big_nohaplotig	exon	33125086	33125092	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 514 508 .
Chr1	stalkie_big_nohaplotig	exon	33138511	33138520	80	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 524 515 .
Chr1	stalkie_big_nohaplotig	exon	33147021	33147040	85	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 541 525 .
Chr1	stalkie_big_nohaplotig	exon	33148808	33148812	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 546 542 .
Chr1	stalkie_big_nohaplotig	exon	33170505	33170508	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 550 547 .
Chr1	stalkie_big_nohaplotig	exon	33171591	33171592	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 552 551 .
Chr1	stalkie_big_nohaplotig	exon	33175205	33175211	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 559 553 .
Chr1	stalkie_big_nohaplotig	exon	33183269	33183275	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 566 560 .
Chr1	stalkie_big_nohaplotig	exon	33183392	33183396	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 571 567 .
Chr1	stalkie_big_nohaplotig	exon	33194727	33194733	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 578 572 .
Chr1	stalkie_big_nohaplotig	exon	33199477	33199507	54	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 601 579 .
Chr1	stalkie_big_nohaplotig	exon	33203649	33203653	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 606 602 .
Chr1	stalkie_big_nohaplotig	exon	33204109	33204115	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 613 607 .
Chr1	stalkie_big_nohaplotig	exon	33207449	33207478	33	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 623 614 .
Chr1	stalkie_big_nohaplotig	exon	33207886	33207892	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 630 624 .
Chr1	stalkie_big_nohaplotig	exon	33211692	33211694	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 633 631 .
Chr1	stalkie_big_nohaplotig	exon	33212693	33212699	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 640 634 .
Chr1	stalkie_big_nohaplotig	exon	33216692	33216695	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 644 641 .
Chr1	stalkie_big_nohaplotig	exon	33216780	33216785	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 650 645 .
Chr1	stalkie_big_nohaplotig	exon	33220874	33220881	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 658 651 .
Chr1	stalkie_big_nohaplotig	exon	33224551	33224556	83	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 664 659 .
Chr1	stalkie_big_nohaplotig	exon	33229369	33229373	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 669 665 .
Chr1	stalkie_big_nohaplotig	exon	33231377	33231385	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 678 670 .
Chr1	stalkie_big_nohaplotig	exon	33232752	33232757	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 684 679 .
Chr1	stalkie_big_nohaplotig	exon	33235332	33235350	51	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 717 685 .
Chr1	stalkie_big_nohaplotig	exon	33241264	33241267	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 721 718 .
Chr1	stalkie_big_nohaplotig	exon	33242417	33242422	100	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 727 722 .
Chr1	stalkie_big_nohaplotig	exon	33242547	33243242	99	+	.	Parent=comp143047_c0_seq1.mrna1;Target=comp143047_c0_seq1 1420 728 .
Chr1	stalkie_big_nohaplotig	CDS	33242700	33242724	.	+	0	Parent=comp143047_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33148391	33149108	.	+	.	ID=comp114621_c1_seq1.mrna1;geneID=comp114621_c1_seq1.path1;Name=comp114621_c1_seq1;Dir=indeterminatecoverage=99.3;identity=90.6;matches=653;mismatches=57;indels=11;unknowns=0;Target=comp114621_c1_seq1 713 1 .;CDS_Target=comp114621_c1_seq1 467 384 .;locus=RLOC_00007019
Chr1	stalkie_big_nohaplotig	exon	33148391	33149108	90	+	.	Parent=comp114621_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	33148781	33148862	.	+	0	Parent=comp114621_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33193654	33242341	.	+	.	ID=comp162763_c2_seq1.mrna1;geneID=comp162763_c2_seq1.path1;Name=comp162763_c2_seq1;Dir=sensecoverage=99.9;identity=99.0;matches=4253;mismatches=33;indels=8;unknowns=0;locus=RLOC_00007019
Chr1	stalkie_big_nohaplotig	exon	33193654	33194717	99	+	.	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 4 1072 +
Chr1	stalkie_big_nohaplotig	exon	33199438	33199445	100	+	.	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 1073 1080 +
Chr1	stalkie_big_nohaplotig	exon	33203176	33203186	100	+	.	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 1081 1091 +
Chr1	stalkie_big_nohaplotig	exon	33206900	33206919	80	+	.	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 1092 1109 +
Chr1	stalkie_big_nohaplotig	exon	33211520	33211625	100	+	.	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 1141 1246 +
Chr1	stalkie_big_nohaplotig	exon	33233241	33233329	100	+	.	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 1247 1335 +
Chr1	stalkie_big_nohaplotig	exon	33233391	33234049	98	+	.	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 1336 1994 +
Chr1	stalkie_big_nohaplotig	exon	33234108	33234267	100	+	.	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 1995 2154 +
Chr1	stalkie_big_nohaplotig	exon	33234330	33234782	98	+	.	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 2155 2607 +
Chr1	stalkie_big_nohaplotig	exon	33236290	33236392	99	+	.	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 2608 2710 +
Chr1	stalkie_big_nohaplotig	exon	33236463	33236710	98	+	.	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 2711 2958 +
Chr1	stalkie_big_nohaplotig	exon	33237573	33237671	98	+	.	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 2959 3057 +
Chr1	stalkie_big_nohaplotig	exon	33237965	33238594	98	+	.	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 3058 3687 +
Chr1	stalkie_big_nohaplotig	exon	33241435	33241468	100	+	.	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 3688 3721 +
Chr1	stalkie_big_nohaplotig	exon	33241739	33242341	99	+	.	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 3722 4325 +
Chr1	stalkie_big_nohaplotig	CDS	33233241	33233329	.	+	1	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 1247 1335 +
Chr1	stalkie_big_nohaplotig	CDS	33233391	33234049	.	+	2	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 1336 1994 +
Chr1	stalkie_big_nohaplotig	CDS	33234108	33234267	.	+	0	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 1995 2154 +
Chr1	stalkie_big_nohaplotig	CDS	33234330	33234782	.	+	2	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 2155 2607 +
Chr1	stalkie_big_nohaplotig	CDS	33236290	33236392	.	+	2	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 2608 2710 +
Chr1	stalkie_big_nohaplotig	CDS	33236463	33236710	.	+	1	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 2711 2958 +
Chr1	stalkie_big_nohaplotig	CDS	33237573	33237671	.	+	2	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 2959 3057 +
Chr1	stalkie_big_nohaplotig	CDS	33237965	33238594	.	+	2	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 3058 3687 +
Chr1	stalkie_big_nohaplotig	CDS	33241435	33241464	.	+	2	Parent=comp162763_c2_seq1.mrna1;Target=comp162763_c2_seq1 3688 3717 +
Chr1	stalkie_big_nohaplotig	mRNA	33233241	33241795	.	+	.	ID=FBgn0028582.1.mrna1;geneID=FBgn0028582.1.path1;Name=FBgn0028582.1;Dir=sensecoverage=99.5;identity=99.0;matches=2472;mismatches=26;indels=0;unknowns=0;locus=RLOC_00007019
Chr1	stalkie_big_nohaplotig	exon	33233241	33233329	100	+	.	Parent=FBgn0028582.1.mrna1;Target=FBgn0028582.1 14 102 +
Chr1	stalkie_big_nohaplotig	exon	33233391	33234049	98	+	.	Parent=FBgn0028582.1.mrna1;Target=FBgn0028582.1 103 761 +
Chr1	stalkie_big_nohaplotig	exon	33234108	33234267	100	+	.	Parent=FBgn0028582.1.mrna1;Target=FBgn0028582.1 762 921 +
Chr1	stalkie_big_nohaplotig	exon	33234330	33234782	98	+	.	Parent=FBgn0028582.1.mrna1;Target=FBgn0028582.1 922 1374 +
Chr1	stalkie_big_nohaplotig	exon	33236290	33236392	99	+	.	Parent=FBgn0028582.1.mrna1;Target=FBgn0028582.1 1375 1477 +
Chr1	stalkie_big_nohaplotig	exon	33236463	33236710	98	+	.	Parent=FBgn0028582.1.mrna1;Target=FBgn0028582.1 1478 1725 +
Chr1	stalkie_big_nohaplotig	exon	33237573	33237671	98	+	.	Parent=FBgn0028582.1.mrna1;Target=FBgn0028582.1 1726 1824 +
Chr1	stalkie_big_nohaplotig	exon	33237965	33238594	98	+	.	Parent=FBgn0028582.1.mrna1;Target=FBgn0028582.1 1825 2454 +
Chr1	stalkie_big_nohaplotig	exon	33241739	33241795	100	+	.	Parent=FBgn0028582.1.mrna1;Target=FBgn0028582.1 2455 2511 +
Chr1	stalkie_big_nohaplotig	CDS	33233243	33233329	.	+	0	Parent=FBgn0028582.1.mrna1;Target=FBgn0028582.1 16 102 +
Chr1	stalkie_big_nohaplotig	CDS	33233391	33234049	.	+	0	Parent=FBgn0028582.1.mrna1;Target=FBgn0028582.1 103 761 +
Chr1	stalkie_big_nohaplotig	CDS	33234108	33234267	.	+	1	Parent=FBgn0028582.1.mrna1;Target=FBgn0028582.1 762 921 +
Chr1	stalkie_big_nohaplotig	CDS	33234330	33234782	.	+	0	Parent=FBgn0028582.1.mrna1;Target=FBgn0028582.1 922 1374 +
Chr1	stalkie_big_nohaplotig	CDS	33236290	33236392	.	+	0	Parent=FBgn0028582.1.mrna1;Target=FBgn0028582.1 1375 1477 +
Chr1	stalkie_big_nohaplotig	CDS	33236463	33236710	.	+	2	Parent=FBgn0028582.1.mrna1;Target=FBgn0028582.1 1478 1725 +
Chr1	stalkie_big_nohaplotig	CDS	33237573	33237671	.	+	0	Parent=FBgn0028582.1.mrna1;Target=FBgn0028582.1 1726 1824 +
Chr1	stalkie_big_nohaplotig	CDS	33237965	33238594	.	+	0	Parent=FBgn0028582.1.mrna1;Target=FBgn0028582.1 1825 2454 +
Chr1	stalkie_big_nohaplotig	CDS	33241739	33241795	.	+	0	Parent=FBgn0028582.1.mrna1;Target=FBgn0028582.1 2455 2511 +
Chr1	stalkie_big_nohaplotig	mRNA	33239811	33241458	.	+	.	ID=comp160818_c0_seq1.mrna1;geneID=comp160818_c0_seq1.path1;Name=comp160818_c0_seq1;Dir=indeterminatecoverage=98.9;identity=95.1;matches=1553;mismatches=56;indels=24;unknowns=0;Target=comp160818_c0_seq1 420 262 .;locus=RLOC_00007019
Chr1	stalkie_big_nohaplotig	exon	33239811	33240433	93	+	.	Parent=comp160818_c0_seq1.mrna1;Target=comp160818_c0_seq1 624 19 .
Chr1	stalkie_big_nohaplotig	exon	33240450	33241458	95	+	.	Parent=comp160818_c0_seq1.mrna1;Target=comp160818_c0_seq1 1656 653 .
Chr1	stalkie_big_nohaplotig	CDS	33240058	33240217	.	+	0	Parent=comp160818_c0_seq1.mrna1
Chr1	gffcl	locus	33080570	33081130	.	-	.	ID=RLOC_00007020;geneIDs=comp144655_c0_seq1.path1;transcripts=comp144655_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33080570	33081130	.	-	.	ID=comp144655_c0_seq1.mrna1;geneID=comp144655_c0_seq1.path1;Name=comp144655_c0_seq1;Dir=indeterminatecoverage=93.7;identity=99.1;matches=556;mismatches=5;indels=0;unknowns=0;Target=comp144655_c0_seq1 599 39 .;CDS_Target=comp144655_c0_seq1 255 40 .;locus=RLOC_00007020
Chr1	stalkie_big_nohaplotig	exon	33080570	33081130	99	-	.	Parent=comp144655_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	33080914	33081129	.	-	0	Parent=comp144655_c0_seq1.mrna1
Chr1	gffcl	locus	33084829	33087139	.	-	.	ID=RLOC_00007021;geneIDs=FBgn0015033.1.path1;transcripts=FBgn0015033.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33084829	33087139	.	-	.	ID=FBgn0015033.1.mrna1;geneID=FBgn0015033.1.path1;Name=FBgn0015033.1;Dir=sensecoverage=100.0;identity=99.2;matches=1131;mismatches=2;indels=7;unknowns=0;Target=FBgn0015033.1 3 41 +;locus=RLOC_00007021
Chr1	stalkie_big_nohaplotig	exon	33084829	33085166	100	-	.	Parent=FBgn0015033.1.mrna1;Target=FBgn0015033.1 803 1140 +
Chr1	stalkie_big_nohaplotig	exon	33085293	33085861	98	-	.	Parent=FBgn0015033.1.mrna1;Target=FBgn0015033.1 228 802 +
Chr1	stalkie_big_nohaplotig	exon	33086849	33086918	100	-	.	Parent=FBgn0015033.1.mrna1;Target=FBgn0015033.1 158 227 +
Chr1	stalkie_big_nohaplotig	exon	33086984	33087139	99	-	.	Parent=FBgn0015033.1.mrna1;Target=FBgn0015033.1 1 157 +
Chr1	stalkie_big_nohaplotig	CDS	33087100	33087137	.	-	0	Parent=FBgn0015033.1.mrna1
Chr1	gffcl	locus	33127511	33139218	.	+	.	ID=RLOC_00007022;geneIDs=FBgn0035793.1.path1;transcripts=FBgn0035793.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33127511	33139218	.	+	.	ID=FBgn0035793.1.mrna1;geneID=FBgn0035793.1.path1;Name=FBgn0035793.1;Dir=sensecoverage=100.0;identity=99.8;matches=3144;mismatches=6;indels=0;unknowns=0;locus=RLOC_00007022
Chr1	stalkie_big_nohaplotig	exon	33127511	33127588	100	+	.	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 1 78 +
Chr1	stalkie_big_nohaplotig	exon	33127736	33127853	100	+	.	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 79 196 +
Chr1	stalkie_big_nohaplotig	exon	33131417	33131613	100	+	.	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 197 393 +
Chr1	stalkie_big_nohaplotig	exon	33131735	33131863	99	+	.	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 394 522 +
Chr1	stalkie_big_nohaplotig	exon	33131938	33132100	100	+	.	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 523 685 +
Chr1	stalkie_big_nohaplotig	exon	33132154	33132509	99	+	.	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 686 1041 +
Chr1	stalkie_big_nohaplotig	exon	33132570	33133044	99	+	.	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 1042 1516 +
Chr1	stalkie_big_nohaplotig	exon	33133111	33133158	100	+	.	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 1517 1564 +
Chr1	stalkie_big_nohaplotig	exon	33135462	33135950	100	+	.	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 1565 2053 +
Chr1	stalkie_big_nohaplotig	exon	33136389	33136814	100	+	.	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 2054 2479 +
Chr1	stalkie_big_nohaplotig	exon	33136882	33137015	100	+	.	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 2480 2613 +
Chr1	stalkie_big_nohaplotig	exon	33138614	33138817	99	+	.	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 2614 2817 +
Chr1	stalkie_big_nohaplotig	exon	33138886	33139218	100	+	.	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 2818 3150 +
Chr1	stalkie_big_nohaplotig	CDS	33127511	33127588	.	+	0	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 1 78 +
Chr1	stalkie_big_nohaplotig	CDS	33127736	33127853	.	+	0	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 79 196 +
Chr1	stalkie_big_nohaplotig	CDS	33131417	33131613	.	+	2	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 197 393 +
Chr1	stalkie_big_nohaplotig	CDS	33131735	33131863	.	+	0	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 394 522 +
Chr1	stalkie_big_nohaplotig	CDS	33131938	33132100	.	+	0	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 523 685 +
Chr1	stalkie_big_nohaplotig	CDS	33132154	33132509	.	+	2	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 686 1041 +
Chr1	stalkie_big_nohaplotig	CDS	33132570	33133044	.	+	0	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 1042 1516 +
Chr1	stalkie_big_nohaplotig	CDS	33133111	33133158	.	+	2	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 1517 1564 +
Chr1	stalkie_big_nohaplotig	CDS	33135462	33135950	.	+	2	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 1565 2053 +
Chr1	stalkie_big_nohaplotig	CDS	33136389	33136814	.	+	2	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 2054 2479 +
Chr1	stalkie_big_nohaplotig	CDS	33136882	33137015	.	+	2	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 2480 2613 +
Chr1	stalkie_big_nohaplotig	CDS	33138614	33138817	.	+	0	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 2614 2817 +
Chr1	stalkie_big_nohaplotig	CDS	33138886	33139218	.	+	0	Parent=FBgn0035793.1.mrna1;Target=FBgn0035793.1 2818 3150 +
Chr1	gffcl	locus	33143213	33162470	.	-	.	ID=RLOC_00007023;geneIDs=FBgn0052372.1.path1;transcripts=FBgn0052372.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33143213	33162470	.	-	.	ID=FBgn0052372.1.mrna1;geneID=FBgn0052372.1.path1;Name=FBgn0052372.1;Dir=sensecoverage=100.0;identity=99.2;matches=2485;mismatches=14;indels=6;unknowns=0;locus=RLOC_00007023
Chr1	stalkie_big_nohaplotig	exon	33143213	33144171	98	-	.	Parent=FBgn0052372.1.mrna1;Target=FBgn0052372.1 1547 2499 +
Chr1	stalkie_big_nohaplotig	exon	33144236	33144434	100	-	.	Parent=FBgn0052372.1.mrna1;Target=FBgn0052372.1 1348 1546 +
Chr1	stalkie_big_nohaplotig	exon	33145933	33146947	99	-	.	Parent=FBgn0052372.1.mrna1;Target=FBgn0052372.1 333 1347 +
Chr1	stalkie_big_nohaplotig	exon	33162139	33162470	99	-	.	Parent=FBgn0052372.1.mrna1;Target=FBgn0052372.1 1 332 +
Chr1	stalkie_big_nohaplotig	CDS	33143213	33144171	.	-	2	Parent=FBgn0052372.1.mrna1;Target=FBgn0052372.1 1547 2499 +
Chr1	stalkie_big_nohaplotig	CDS	33144236	33144434	.	-	0	Parent=FBgn0052372.1.mrna1;Target=FBgn0052372.1 1348 1546 +
Chr1	stalkie_big_nohaplotig	CDS	33145933	33146947	.	-	1	Parent=FBgn0052372.1.mrna1;Target=FBgn0052372.1 333 1347 +
Chr1	stalkie_big_nohaplotig	CDS	33162139	33162470	.	-	0	Parent=FBgn0052372.1.mrna1;Target=FBgn0052372.1 1 332 +
Chr1	gffcl	locus	33185246	33186602	.	-	.	ID=RLOC_00007024;geneIDs=comp153542_c0_seq1.path1;transcripts=comp153542_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33185246	33186602	.	-	.	ID=comp153542_c0_seq1.mrna1;geneID=comp153542_c0_seq1.path1;Name=comp153542_c0_seq1;Dir=sensecoverage=99.2;identity=97.0;matches=1133;mismatches=22;indels=13;unknowns=0;locus=RLOC_00007024
Chr1	stalkie_big_nohaplotig	exon	33185246	33185804	96	-	.	Parent=comp153542_c0_seq1.mrna1;Target=comp153542_c0_seq1 610 1168 +
Chr1	stalkie_big_nohaplotig	exon	33185864	33185920	98	-	.	Parent=comp153542_c0_seq1.mrna1;Target=comp153542_c0_seq1 553 609 +
Chr1	stalkie_big_nohaplotig	exon	33185993	33186346	98	-	.	Parent=comp153542_c0_seq1.mrna1;Target=comp153542_c0_seq1 199 552 +
Chr1	stalkie_big_nohaplotig	exon	33186409	33186602	95	-	.	Parent=comp153542_c0_seq1.mrna1;Target=comp153542_c0_seq1 10 198 +
Chr1	stalkie_big_nohaplotig	CDS	33185526	33185804	.	-	0	Parent=comp153542_c0_seq1.mrna1;Target=comp153542_c0_seq1 610 888 +
Chr1	stalkie_big_nohaplotig	CDS	33185864	33185920	.	-	0	Parent=comp153542_c0_seq1.mrna1;Target=comp153542_c0_seq1 553 609 +
Chr1	stalkie_big_nohaplotig	CDS	33185993	33186346	.	-	0	Parent=comp153542_c0_seq1.mrna1;Target=comp153542_c0_seq1 199 552 +
Chr1	stalkie_big_nohaplotig	CDS	33186409	33186432	.	-	0	Parent=comp153542_c0_seq1.mrna1;Target=comp153542_c0_seq1 175 198 +
Chr1	gffcl	locus	33189262	33190366	.	-	.	ID=RLOC_00007025;geneIDs=comp150310_c0_seq1.path1;transcripts=comp150310_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33189262	33190366	.	-	.	ID=comp150310_c0_seq1.mrna1;geneID=comp150310_c0_seq1.path1;Name=comp150310_c0_seq1;Dir=sensecoverage=100.0;identity=97.0;matches=900;mismatches=7;indels=21;unknowns=0;locus=RLOC_00007025
Chr1	stalkie_big_nohaplotig	exon	33189262	33189609	93	-	.	Parent=comp150310_c0_seq1.mrna1;Target=comp150310_c0_seq1 580 907 +
Chr1	stalkie_big_nohaplotig	exon	33189660	33189719	100	-	.	Parent=comp150310_c0_seq1.mrna1;Target=comp150310_c0_seq1 520 579 +
Chr1	stalkie_big_nohaplotig	exon	33189792	33190139	99	-	.	Parent=comp150310_c0_seq1.mrna1;Target=comp150310_c0_seq1 172 519 +
Chr1	stalkie_big_nohaplotig	exon	33190195	33190366	97	-	.	Parent=comp150310_c0_seq1.mrna1;Target=comp150310_c0_seq1 1 171 +
Chr1	stalkie_big_nohaplotig	CDS	33189358	33189609	.	-	0	Parent=comp150310_c0_seq1.mrna1;Target=comp150310_c0_seq1 580 831 +
Chr1	stalkie_big_nohaplotig	CDS	33189660	33189719	.	-	0	Parent=comp150310_c0_seq1.mrna1;Target=comp150310_c0_seq1 520 579 +
Chr1	stalkie_big_nohaplotig	CDS	33189792	33190139	.	-	0	Parent=comp150310_c0_seq1.mrna1;Target=comp150310_c0_seq1 172 519 +
Chr1	stalkie_big_nohaplotig	CDS	33190195	33190221	.	-	0	Parent=comp150310_c0_seq1.mrna1;Target=comp150310_c0_seq1 145 171 +
Chr1	gffcl	locus	33204201	33205604	.	-	.	ID=RLOC_00007026;geneIDs=comp153888_c0_seq1.path1;transcripts=comp153888_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33204201	33205604	.	-	.	ID=comp153888_c0_seq1.mrna1;geneID=comp153888_c0_seq1.path1;Name=comp153888_c0_seq1;Dir=indeterminatecoverage=99.9;identity=87.7;matches=1293;mismatches=79;indels=102;unknowns=0;Target=comp153888_c0_seq1 1442 1 .;CDS_Target=comp153888_c0_seq1 1059 1021 .;locus=RLOC_00007026
Chr1	stalkie_big_nohaplotig	exon	33204201	33205604	87	-	.	Parent=comp153888_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	33204576	33204612	.	-	0	Parent=comp153888_c0_seq1.mrna1
Chr1	gffcl	locus	33209527	33210142	.	-	.	ID=RLOC_00007027;geneIDs=comp150567_c1_seq1.path1;transcripts=comp150567_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33209527	33210142	.	-	.	ID=comp150567_c1_seq1.mrna1;geneID=comp150567_c1_seq1.path1;Name=comp150567_c1_seq1;Dir=indeterminatecoverage=100.0;identity=95.9;matches=592;mismatches=24;indels=1;unknowns=0;Target=comp150567_c1_seq1 617 1 .;CDS_Target=comp150567_c1_seq1 500 420 .;locus=RLOC_00007027
Chr1	stalkie_big_nohaplotig	exon	33209527	33210142	95	-	.	Parent=comp150567_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	33209644	33209724	.	-	0	Parent=comp150567_c1_seq1.mrna1
Chr1	gffcl	locus	33224738	33226089	.	-	.	ID=RLOC_00007028;geneIDs=comp154961_c0_seq1.path1;transcripts=comp154961_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33224738	33226089	.	-	.	ID=comp154961_c0_seq1.mrna1;geneID=comp154961_c0_seq1.path1;Name=comp154961_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=1320;mismatches=11;indels=25;unknowns=0;Target=comp154961_c0_seq1 1335 1 .;CDS_Target=comp154961_c0_seq1 462 343 .;locus=RLOC_00007028
Chr1	stalkie_big_nohaplotig	exon	33224738	33226089	97	-	.	Parent=comp154961_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	33225631	33225750	.	-	0	Parent=comp154961_c0_seq1.mrna1
Chr1	gffcl	locus	33226510	33227122	.	+	.	ID=RLOC_00007029;geneIDs=comp156151_c0_seq1.path1;transcripts=comp156151_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33226510	33227122	.	+	.	ID=comp156151_c0_seq1.mrna1;geneID=comp156151_c0_seq1.path1;Name=comp156151_c0_seq1;Dir=indeterminatecoverage=74.6;identity=94.5;matches=584;mismatches=28;indels=6;unknowns=0;Target=comp156151_c0_seq1 827 211 .;CDS_Target=comp156151_c0_seq1 270 211 .;locus=RLOC_00007029
Chr1	stalkie_big_nohaplotig	exon	33226510	33227122	94	+	.	Parent=comp156151_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	33226510	33226564	.	+	0	Parent=comp156151_c0_seq1.mrna1
Chr1	gffcl	locus	33227406	33228014	.	-	.	ID=RLOC_00007030;geneIDs=comp150567_c1_seq1.path2;transcripts=comp150567_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	33227406	33228014	.	-	.	ID=comp150567_c1_seq1.mrna2;geneID=comp150567_c1_seq1.path2;Name=comp150567_c1_seq1;Dir=indeterminatecoverage=99.5;identity=94.0;matches=577;mismatches=32;indels=5;unknowns=0;Target=comp150567_c1_seq1 617 4 .;CDS_Target=comp150567_c1_seq1 500 420 .;locus=RLOC_00007030
Chr1	stalkie_big_nohaplotig	exon	33227406	33228014	93	-	.	Parent=comp150567_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	33227523	33227602	.	-	0	Parent=comp150567_c1_seq1.mrna2
Chr1	gffcl	locus	33305827	33306971	.	+	.	ID=RLOC_00007031;geneIDs=comp152133_c0_seq1.path2;transcripts=comp152133_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	33305827	33306971	.	+	.	ID=comp152133_c0_seq1.mrna2;geneID=comp152133_c0_seq1.path2;Name=comp152133_c0_seq1;Dir=antisensecoverage=62.7;identity=99.8;matches=852;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007031
Chr1	stalkie_big_nohaplotig	exon	33305827	33306297	99	+	.	Parent=comp152133_c0_seq1.mrna2;Target=comp152133_c0_seq1 891 1361 -
Chr1	stalkie_big_nohaplotig	exon	33306526	33306681	100	+	.	Parent=comp152133_c0_seq1.mrna2;Target=comp152133_c0_seq1 735 890 -
Chr1	stalkie_big_nohaplotig	exon	33306745	33306971	100	+	.	Parent=comp152133_c0_seq1.mrna2;Target=comp152133_c0_seq1 508 734 -
Chr1	gffcl	locus	33310582	33311292	.	+	.	ID=RLOC_00007032;geneIDs=comp146998_c0_seq1.path1;transcripts=comp146998_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33310582	33311292	.	+	.	ID=comp146998_c0_seq1.mrna1;geneID=comp146998_c0_seq1.path1;Name=comp146998_c0_seq1;Dir=indeterminatecoverage=97.7;identity=99.7;matches=709;mismatches=2;indels=0;unknowns=0;Target=comp146998_c0_seq1 716 6 .;CDS_Target=comp146998_c0_seq1 561 469 .;locus=RLOC_00007032
Chr1	stalkie_big_nohaplotig	exon	33310582	33311292	99	+	.	Parent=comp146998_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	33311045	33311137	.	+	0	Parent=comp146998_c0_seq1.mrna1
Chr1	gffcl	locus	33352453	33353796	.	+	.	ID=RLOC_00007034;geneIDs=comp64985_c0_seq1.path1;transcripts=comp64985_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33352453	33353796	.	+	.	ID=comp64985_c0_seq1.mrna1;geneID=comp64985_c0_seq1.path1;Name=comp64985_c0_seq1;Dir=antisensecoverage=95.3;identity=99.8;matches=586;mismatches=1;indels=0;unknowns=0;Target=comp64985_c0_seq1 145 381 .;locus=RLOC_00007034
Chr1	stalkie_big_nohaplotig	exon	33352453	33352656	99	+	.	Parent=comp64985_c0_seq1.mrna1;Target=comp64985_c0_seq1 393 596 -
Chr1	stalkie_big_nohaplotig	exon	33353414	33353796	100	+	.	Parent=comp64985_c0_seq1.mrna1;Target=comp64985_c0_seq1 10 392 -
Chr1	stalkie_big_nohaplotig	CDS	33353425	33353661	.	+	0	Parent=comp64985_c0_seq1.mrna1
Chr1	gffcl	locus	33375037	33375482	.	-	.	ID=RLOC_00007035;geneIDs=comp123581_c0_seq1.path6;transcripts=comp123581_c0_seq1.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	33375037	33375482	.	-	.	ID=comp123581_c0_seq1.mrna6;geneID=comp123581_c0_seq1.path6;Name=comp123581_c0_seq1;Dir=indeterminatecoverage=99.6;identity=90.7;matches=214;mismatches=22;indels=0;unknowns=0;locus=RLOC_00007035
Chr1	stalkie_big_nohaplotig	exon	33375037	33375104	91	-	.	Parent=comp123581_c0_seq1.mrna6;Target=comp123581_c0_seq1 236 169 .
Chr1	stalkie_big_nohaplotig	exon	33375315	33375482	90	-	.	Parent=comp123581_c0_seq1.mrna6;Target=comp123581_c0_seq1 168 1 .
Chr1	stalkie_big_nohaplotig	CDS	33375038	33375104	.	-	1	Parent=comp123581_c0_seq1.mrna6;Target=comp123581_c0_seq1 235 169 .
Chr1	stalkie_big_nohaplotig	CDS	33375315	33375319	.	-	0	Parent=comp123581_c0_seq1.mrna6;Target=comp123581_c0_seq1 168 164 .
Chr1	gffcl	locus	33519435	33561516	.	+	.	ID=RLOC_00007036;geneIDs=FBgn0035802.1.path1;transcripts=FBgn0035802.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33519435	33561516	.	+	.	ID=FBgn0035802.1.mrna1;geneID=FBgn0035802.1.path1;Name=FBgn0035802.1;Dir=sensecoverage=99.8;identity=99.3;matches=3598;mismatches=26;indels=0;unknowns=0;locus=RLOC_00007036
Chr1	stalkie_big_nohaplotig	exon	33519435	33519515	97	+	.	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 7 87 +
Chr1	stalkie_big_nohaplotig	exon	33521148	33522026	99	+	.	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 88 966 +
Chr1	stalkie_big_nohaplotig	exon	33554946	33555071	98	+	.	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 967 1092 +
Chr1	stalkie_big_nohaplotig	exon	33555165	33555841	99	+	.	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 1093 1769 +
Chr1	stalkie_big_nohaplotig	exon	33555904	33556065	100	+	.	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 1770 1931 +
Chr1	stalkie_big_nohaplotig	exon	33556143	33556482	99	+	.	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 1932 2271 +
Chr1	stalkie_big_nohaplotig	exon	33557261	33557383	98	+	.	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 2272 2394 +
Chr1	stalkie_big_nohaplotig	exon	33557455	33557724	100	+	.	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 2395 2664 +
Chr1	stalkie_big_nohaplotig	exon	33557890	33558103	100	+	.	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 2665 2878 +
Chr1	stalkie_big_nohaplotig	exon	33558975	33559091	100	+	.	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 2879 2995 +
Chr1	stalkie_big_nohaplotig	exon	33559205	33559594	98	+	.	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 2996 3385 +
Chr1	stalkie_big_nohaplotig	exon	33561272	33561516	97	+	.	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 3386 3630 +
Chr1	stalkie_big_nohaplotig	CDS	33519435	33519515	.	+	0	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 7 87 +
Chr1	stalkie_big_nohaplotig	CDS	33521148	33522026	.	+	0	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 88 966 +
Chr1	stalkie_big_nohaplotig	CDS	33554946	33555071	.	+	0	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 967 1092 +
Chr1	stalkie_big_nohaplotig	CDS	33555165	33555841	.	+	0	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 1093 1769 +
Chr1	stalkie_big_nohaplotig	CDS	33555904	33556065	.	+	1	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 1770 1931 +
Chr1	stalkie_big_nohaplotig	CDS	33556143	33556482	.	+	1	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 1932 2271 +
Chr1	stalkie_big_nohaplotig	CDS	33557261	33557383	.	+	0	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 2272 2394 +
Chr1	stalkie_big_nohaplotig	CDS	33557455	33557724	.	+	0	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 2395 2664 +
Chr1	stalkie_big_nohaplotig	CDS	33557890	33558103	.	+	0	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 2665 2878 +
Chr1	stalkie_big_nohaplotig	CDS	33558975	33559091	.	+	2	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 2879 2995 +
Chr1	stalkie_big_nohaplotig	CDS	33559205	33559594	.	+	2	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 2996 3385 +
Chr1	stalkie_big_nohaplotig	CDS	33561272	33561516	.	+	2	Parent=FBgn0035802.1.mrna1;Target=FBgn0035802.1 3386 3630 +
Chr1	gffcl	locus	33566469	33567846	.	-	.	ID=RLOC_00007037;geneIDs=FBgn0053276.1.path1;transcripts=FBgn0053276.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33566469	33567846	.	-	.	ID=FBgn0053276.1.mrna1;geneID=FBgn0053276.1.path1;Name=FBgn0053276.1;Dir=sensecoverage=100.0;identity=100.0;matches=306;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007037
Chr1	stalkie_big_nohaplotig	exon	33566469	33566534	100	-	.	Parent=FBgn0053276.1.mrna1;Target=FBgn0053276.1 241 306 +
Chr1	stalkie_big_nohaplotig	exon	33566605	33566653	100	-	.	Parent=FBgn0053276.1.mrna1;Target=FBgn0053276.1 192 240 +
Chr1	stalkie_big_nohaplotig	exon	33567553	33567634	100	-	.	Parent=FBgn0053276.1.mrna1;Target=FBgn0053276.1 110 191 +
Chr1	stalkie_big_nohaplotig	exon	33567687	33567754	100	-	.	Parent=FBgn0053276.1.mrna1;Target=FBgn0053276.1 42 109 +
Chr1	stalkie_big_nohaplotig	exon	33567806	33567846	100	-	.	Parent=FBgn0053276.1.mrna1;Target=FBgn0053276.1 1 41 +
Chr1	stalkie_big_nohaplotig	CDS	33566469	33566534	.	-	0	Parent=FBgn0053276.1.mrna1;Target=FBgn0053276.1 241 306 +
Chr1	stalkie_big_nohaplotig	CDS	33566605	33566653	.	-	1	Parent=FBgn0053276.1.mrna1;Target=FBgn0053276.1 192 240 +
Chr1	stalkie_big_nohaplotig	CDS	33567553	33567634	.	-	2	Parent=FBgn0053276.1.mrna1;Target=FBgn0053276.1 110 191 +
Chr1	stalkie_big_nohaplotig	CDS	33567687	33567754	.	-	1	Parent=FBgn0053276.1.mrna1;Target=FBgn0053276.1 42 109 +
Chr1	stalkie_big_nohaplotig	CDS	33567806	33567846	.	-	0	Parent=FBgn0053276.1.mrna1;Target=FBgn0053276.1 1 41 +
Chr1	gffcl	locus	33566736	33567403	.	-	.	ID=RLOC_00007038;geneIDs=comp152630_c1_seq1.path1;transcripts=comp152630_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33566736	33567403	.	-	.	ID=comp152630_c1_seq1.mrna1;geneID=comp152630_c1_seq1.path1;Name=comp152630_c1_seq1;Dir=indeterminatecoverage=99.9;identity=92.3;matches=631;mismatches=36;indels=17;unknowns=0;Target=comp152630_c1_seq1 684 2 .;CDS_Target=comp152630_c1_seq1 52 2 .;locus=RLOC_00007038
Chr1	stalkie_big_nohaplotig	exon	33566736	33567403	92	-	.	Parent=comp152630_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	33567353	33567403	.	-	0	Parent=comp152630_c1_seq1.mrna1
Chr1	gffcl	locus	33568102	33568901	.	-	.	ID=RLOC_00007039;geneIDs=FBgn0035805.1.path1;transcripts=FBgn0035805.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33568102	33568901	.	-	.	ID=FBgn0035805.1.mrna1;geneID=FBgn0035805.1.path1;Name=FBgn0035805.1;Dir=sensecoverage=100.0;identity=99.9;matches=740;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007039
Chr1	stalkie_big_nohaplotig	exon	33568102	33568314	100	-	.	Parent=FBgn0035805.1.mrna1;Target=FBgn0035805.1 529 741 +
Chr1	stalkie_big_nohaplotig	exon	33568374	33568901	99	-	.	Parent=FBgn0035805.1.mrna1;Target=FBgn0035805.1 1 528 +
Chr1	stalkie_big_nohaplotig	CDS	33568102	33568314	.	-	0	Parent=FBgn0035805.1.mrna1;Target=FBgn0035805.1 529 741 +
Chr1	stalkie_big_nohaplotig	CDS	33568374	33568901	.	-	0	Parent=FBgn0035805.1.mrna1;Target=FBgn0035805.1 1 528 +
Chr1	gffcl	locus	33637690	34036709	.	.	.	ID=RLOC_00007040;geneIDs=comp118302_c0_seq1.path1,comp118302_c0_seq1.path2,comp868152_c0_seq1.path1;transcripts=comp118302_c0_seq1.mrna1,comp118302_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	33638618	34036709	.	-	.	ID=comp118302_c0_seq1.mrna1;geneID=comp118302_c0_seq1.path1;Name=comp118302_c0_seq1;Dir=antisensecoverage=92.4;identity=99.4;matches=801;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007040
Chr1	stalkie_big_nohaplotig	exon	33638618	33639190	99	-	.	Parent=comp118302_c0_seq1.mrna1;Target=comp118302_c0_seq1 2 574 -
Chr1	stalkie_big_nohaplotig	exon	33640741	33640751	90	-	.	Parent=comp118302_c0_seq1.mrna1;Target=comp118302_c0_seq1 575 585 -
Chr1	stalkie_big_nohaplotig	exon	33646001	33646003	100	-	.	Parent=comp118302_c0_seq1.mrna1;Target=comp118302_c0_seq1 646 648 -
Chr1	stalkie_big_nohaplotig	exon	33653619	33653620	100	-	.	Parent=comp118302_c0_seq1.mrna1;Target=comp118302_c0_seq1 649 650 -
Chr1	stalkie_big_nohaplotig	exon	33659948	33659950	100	-	.	Parent=comp118302_c0_seq1.mrna1;Target=comp118302_c0_seq1 651 653 -
Chr1	stalkie_big_nohaplotig	exon	33663376	33663379	100	-	.	Parent=comp118302_c0_seq1.mrna1;Target=comp118302_c0_seq1 654 657 -
Chr1	stalkie_big_nohaplotig	exon	33678998	33679002	100	-	.	Parent=comp118302_c0_seq1.mrna1;Target=comp118302_c0_seq1 658 662 -
Chr1	stalkie_big_nohaplotig	exon	33685565	33685569	100	-	.	Parent=comp118302_c0_seq1.mrna1;Target=comp118302_c0_seq1 663 667 -
Chr1	stalkie_big_nohaplotig	exon	33691870	33691873	100	-	.	Parent=comp118302_c0_seq1.mrna1;Target=comp118302_c0_seq1 668 671 -
Chr1	stalkie_big_nohaplotig	exon	33695213	33695215	100	-	.	Parent=comp118302_c0_seq1.mrna1;Target=comp118302_c0_seq1 672 674 -
Chr1	stalkie_big_nohaplotig	exon	33700957	33700965	100	-	.	Parent=comp118302_c0_seq1.mrna1;Target=comp118302_c0_seq1 675 683 -
Chr1	stalkie_big_nohaplotig	exon	33703399	33703401	100	-	.	Parent=comp118302_c0_seq1.mrna1;Target=comp118302_c0_seq1 684 686 -
Chr1	stalkie_big_nohaplotig	exon	33710129	33710176	97	-	.	Parent=comp118302_c0_seq1.mrna1;Target=comp118302_c0_seq1 687 734 -
Chr1	stalkie_big_nohaplotig	exon	33716661	33716681	100	-	.	Parent=comp118302_c0_seq1.mrna1;Target=comp118302_c0_seq1 735 755 -
Chr1	stalkie_big_nohaplotig	exon	34036599	34036709	99	-	.	Parent=comp118302_c0_seq1.mrna1;Target=comp118302_c0_seq1 756 866 -
Chr1	stalkie_big_nohaplotig	CDS	33700964	33700965	.	-	2	Parent=comp118302_c0_seq1.mrna1;Target=comp118302_c0_seq1 682 683 .
Chr1	stalkie_big_nohaplotig	CDS	33703399	33703401	.	-	2	Parent=comp118302_c0_seq1.mrna1;Target=comp118302_c0_seq1 684 686 .
Chr1	stalkie_big_nohaplotig	CDS	33710129	33710176	.	-	2	Parent=comp118302_c0_seq1.mrna1;Target=comp118302_c0_seq1 687 734 .
Chr1	stalkie_big_nohaplotig	CDS	33716661	33716681	.	-	2	Parent=comp118302_c0_seq1.mrna1;Target=comp118302_c0_seq1 735 755 .
Chr1	stalkie_big_nohaplotig	CDS	34036599	34036662	.	-	0	Parent=comp118302_c0_seq1.mrna1;Target=comp118302_c0_seq1 756 819 .
Chr1	stalkie_big_nohaplotig	mRNA	33716613	33716681	.	+	.	ID=comp118302_c0_seq1.mrna2;geneID=comp118302_c0_seq1.path2;Name=comp118302_c0_seq1;Dir=indeterminatecoverage=7.5;identity=98.6;matches=69;mismatches=0;indels=1;unknowns=0;Target=comp118302_c0_seq1 936 867 .;locus=RLOC_00007040
Chr1	stalkie_big_nohaplotig	exon	33716613	33716681	98	+	.	Parent=comp118302_c0_seq1.mrna2
Chr1	gffcl	locus	33684376	33685449	.	-	.	ID=RLOC_00007041;geneIDs=ORF1504.path1;transcripts=ORF1504.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33684376	33685449	.	-	.	ID=ORF1504.mrna1;geneID=ORF1504.path1;Name=ORF1504;Dir=indeterminatecoverage=100.0;identity=97.2;matches=1050;mismatches=24;indels=6;unknowns=0;Target=ORF1504 1080 1 .;locus=RLOC_00007041
Chr1	stalkie_big_nohaplotig	exon	33684376	33685449	97	-	.	Parent=ORF1504.mrna1
Chr1	stalkie_big_nohaplotig	CDS	33684376	33685449	.	-	0	Parent=ORF1504.mrna1
Chr1	gffcl	locus	33690239	33691116	.	+	.	ID=RLOC_00007042;geneIDs=comp150808_c0_seq1.path1;transcripts=comp150808_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33690239	33691116	.	+	.	ID=comp150808_c0_seq1.mrna1;geneID=comp150808_c0_seq1.path1;Name=comp150808_c0_seq1;Dir=antisensecoverage=98.3;identity=98.3;matches=810;mismatches=7;indels=7;unknowns=0;Target=comp150808_c0_seq1 97 288 .;locus=RLOC_00007042
Chr1	stalkie_big_nohaplotig	exon	33690239	33690633	98	+	.	Parent=comp150808_c0_seq1.mrna1;Target=comp150808_c0_seq1 430 824 -
Chr1	stalkie_big_nohaplotig	exon	33690695	33691116	97	+	.	Parent=comp150808_c0_seq1.mrna1;Target=comp150808_c0_seq1 1 429 -
Chr1	stalkie_big_nohaplotig	CDS	33690829	33691020	.	+	0	Parent=comp150808_c0_seq1.mrna1
Chr1	gffcl	locus	33761298	33762770	.	+	.	ID=RLOC_00007043;geneIDs=comp153233_c0_seq1.path1;transcripts=comp153233_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33761298	33762770	.	+	.	ID=comp153233_c0_seq1.mrna1;geneID=comp153233_c0_seq1.path1;Name=comp153233_c0_seq1;Dir=sensecoverage=98.7;identity=97.9;matches=1382;mismatches=27;indels=3;unknowns=0;Target=comp153233_c0_seq1 622 867 +;locus=RLOC_00007043
Chr1	stalkie_big_nohaplotig	exon	33761298	33762469	97	+	.	Parent=comp153233_c0_seq1.mrna1;Target=comp153233_c0_seq1 1 1171 +
Chr1	stalkie_big_nohaplotig	exon	33762532	33762770	99	+	.	Parent=comp153233_c0_seq1.mrna1;Target=comp153233_c0_seq1 1172 1410 +
Chr1	stalkie_big_nohaplotig	CDS	33761921	33762165	.	+	0	Parent=comp153233_c0_seq1.mrna1
Chr1	gffcl	locus	33888363	33894186	.	-	.	ID=RLOC_00007044;geneIDs=FBgn0036715.1.path2;transcripts=FBgn0036715.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	33888363	33894186	.	-	.	ID=FBgn0036715.1.mrna2;geneID=FBgn0036715.1.path2;Name=FBgn0036715.1;Dir=sensecoverage=96.0;identity=99.4;matches=5254;mismatches=31;indels=0;unknowns=0;locus=RLOC_00007044
Chr1	stalkie_big_nohaplotig	exon	33888363	33888471	100	-	.	Parent=FBgn0036715.1.mrna2;Target=FBgn0036715.1 5400 5508 +
Chr1	stalkie_big_nohaplotig	exon	33888543	33889675	99	-	.	Parent=FBgn0036715.1.mrna2;Target=FBgn0036715.1 4267 5399 +
Chr1	stalkie_big_nohaplotig	exon	33889741	33890043	99	-	.	Parent=FBgn0036715.1.mrna2;Target=FBgn0036715.1 3964 4266 +
Chr1	stalkie_big_nohaplotig	exon	33890110	33891724	99	-	.	Parent=FBgn0036715.1.mrna2;Target=FBgn0036715.1 2349 3963 +
Chr1	stalkie_big_nohaplotig	exon	33891877	33892138	98	-	.	Parent=FBgn0036715.1.mrna2;Target=FBgn0036715.1 2087 2348 +
Chr1	stalkie_big_nohaplotig	exon	33892197	33893694	99	-	.	Parent=FBgn0036715.1.mrna2;Target=FBgn0036715.1 589 2086 +
Chr1	stalkie_big_nohaplotig	exon	33893822	33894186	98	-	.	Parent=FBgn0036715.1.mrna2;Target=FBgn0036715.1 224 588 +
Chr1	stalkie_big_nohaplotig	CDS	33888363	33888471	.	-	0	Parent=FBgn0036715.1.mrna2;Target=FBgn0036715.1 5400 5508 +
Chr1	stalkie_big_nohaplotig	CDS	33888543	33889675	.	-	2	Parent=FBgn0036715.1.mrna2;Target=FBgn0036715.1 4267 5399 +
Chr1	stalkie_big_nohaplotig	CDS	33889741	33890043	.	-	2	Parent=FBgn0036715.1.mrna2;Target=FBgn0036715.1 3964 4266 +
Chr1	stalkie_big_nohaplotig	CDS	33890110	33891724	.	-	0	Parent=FBgn0036715.1.mrna2;Target=FBgn0036715.1 2349 3963 +
Chr1	stalkie_big_nohaplotig	CDS	33891877	33892138	.	-	1	Parent=FBgn0036715.1.mrna2;Target=FBgn0036715.1 2087 2348 +
Chr1	stalkie_big_nohaplotig	CDS	33892197	33893694	.	-	2	Parent=FBgn0036715.1.mrna2;Target=FBgn0036715.1 589 2086 +
Chr1	stalkie_big_nohaplotig	CDS	33893822	33894186	.	-	1	Parent=FBgn0036715.1.mrna2;Target=FBgn0036715.1 224 588 +
Chr1	gffcl	locus	33911584	33954293	.	-	.	ID=RLOC_00007045;geneIDs=comp146921_c0_seq1.path1;transcripts=comp146921_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33911584	33954293	.	-	.	ID=comp146921_c0_seq1.mrna1;geneID=comp146921_c0_seq1.path1;Name=comp146921_c0_seq1;Dir=antisensecoverage=47.8;identity=93.6;matches=2048;mismatches=52;indels=89;unknowns=0;locus=RLOC_00007045
Chr1	stalkie_big_nohaplotig	exon	33911584	33911607	79	-	.	Parent=comp146921_c0_seq1.mrna1;Target=comp146921_c0_seq1 2340 2361 -
Chr1	stalkie_big_nohaplotig	exon	33920992	33921041	51	-	.	Parent=comp146921_c0_seq1.mrna1;Target=comp146921_c0_seq1 2362 2433 -
Chr1	stalkie_big_nohaplotig	exon	33924304	33924305	100	-	.	Parent=comp146921_c0_seq1.mrna1;Target=comp146921_c0_seq1 2434 2435 -
Chr1	stalkie_big_nohaplotig	exon	33931382	33931386	100	-	.	Parent=comp146921_c0_seq1.mrna1;Target=comp146921_c0_seq1 2436 2440 -
Chr1	stalkie_big_nohaplotig	exon	33944366	33944369	100	-	.	Parent=comp146921_c0_seq1.mrna1;Target=comp146921_c0_seq1 2442 2445 -
Chr1	stalkie_big_nohaplotig	exon	33948186	33948213	71	-	.	Parent=comp146921_c0_seq1.mrna1;Target=comp146921_c0_seq1 2446 2465 -
Chr1	stalkie_big_nohaplotig	exon	33949117	33949134	77	-	.	Parent=comp146921_c0_seq1.mrna1;Target=comp146921_c0_seq1 2466 2481 -
Chr1	stalkie_big_nohaplotig	exon	33950617	33950627	90	-	.	Parent=comp146921_c0_seq1.mrna1;Target=comp146921_c0_seq1 2482 2492 -
Chr1	stalkie_big_nohaplotig	exon	33952215	33954018	95	-	.	Parent=comp146921_c0_seq1.mrna1;Target=comp146921_c0_seq1 2493 4277 -
Chr1	stalkie_big_nohaplotig	exon	33954091	33954293	99	-	.	Parent=comp146921_c0_seq1.mrna1;Target=comp146921_c0_seq1 4278 4480 -
Chr1	stalkie_big_nohaplotig	CDS	33953798	33954018	.	-	2	Parent=comp146921_c0_seq1.mrna1;Target=comp146921_c0_seq1 4057 4277 .
Chr1	stalkie_big_nohaplotig	CDS	33954091	33954181	.	-	0	Parent=comp146921_c0_seq1.mrna1;Target=comp146921_c0_seq1 4278 4368 .
Chr1	gffcl	locus	33921796	33922540	.	+	.	ID=RLOC_00007046;geneIDs=comp182455_c0_seq1.path1;transcripts=comp182455_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33921796	33922540	.	+	.	ID=comp182455_c0_seq1.mrna1;geneID=comp182455_c0_seq1.path1;Name=comp182455_c0_seq1;Dir=sensecoverage=99.4;identity=99.1;matches=653;mismatches=6;indels=0;unknowns=0;locus=RLOC_00007046
Chr1	stalkie_big_nohaplotig	exon	33921796	33922000	99	+	.	Parent=comp182455_c0_seq1.mrna1;Target=comp182455_c0_seq1 5 209 +
Chr1	stalkie_big_nohaplotig	exon	33922087	33922540	99	+	.	Parent=comp182455_c0_seq1.mrna1;Target=comp182455_c0_seq1 210 663 +
Chr1	stalkie_big_nohaplotig	CDS	33921916	33922000	.	+	0	Parent=comp182455_c0_seq1.mrna1;Target=comp182455_c0_seq1 125 209 +
Chr1	stalkie_big_nohaplotig	CDS	33922087	33922394	.	+	2	Parent=comp182455_c0_seq1.mrna1;Target=comp182455_c0_seq1 210 517 +
Chr1	gffcl	locus	33932453	33933835	.	-	.	ID=RLOC_00007047;geneIDs=FBgn0015550.1.path1;transcripts=FBgn0015550.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33932453	33933835	.	-	.	ID=FBgn0015550.1.mrna1;geneID=FBgn0015550.1.path1;Name=FBgn0015550.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1382;mismatches=1;indels=0;unknowns=0;Target=FBgn0015550.1 1383 1 .;locus=RLOC_00007047
Chr1	stalkie_big_nohaplotig	exon	33932453	33933835	99	-	.	Parent=FBgn0015550.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	33932453	33933835	.	-	0	Parent=FBgn0015550.1.mrna1
Chr1	gffcl	locus	33945108	33945881	.	-	.	ID=RLOC_00007048;geneIDs=comp135246_c0_seq1.path1;transcripts=comp135246_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33945108	33945881	.	-	.	ID=comp135246_c0_seq1.mrna1;geneID=comp135246_c0_seq1.path1;Name=comp135246_c0_seq1;Dir=antisensecoverage=88.3;identity=97.5;matches=627;mismatches=11;indels=5;unknowns=0;locus=RLOC_00007048
Chr1	stalkie_big_nohaplotig	exon	33945108	33945287	100	-	.	Parent=comp135246_c0_seq1.mrna1;Target=comp135246_c0_seq1 86 265 -
Chr1	stalkie_big_nohaplotig	exon	33945359	33945479	98	-	.	Parent=comp135246_c0_seq1.mrna1;Target=comp135246_c0_seq1 266 386 -
Chr1	stalkie_big_nohaplotig	exon	33945545	33945881	95	-	.	Parent=comp135246_c0_seq1.mrna1;Target=comp135246_c0_seq1 387 728 -
Chr1	stalkie_big_nohaplotig	CDS	33945191	33945287	.	-	1	Parent=comp135246_c0_seq1.mrna1;Target=comp135246_c0_seq1 169 265 .
Chr1	stalkie_big_nohaplotig	CDS	33945359	33945479	.	-	2	Parent=comp135246_c0_seq1.mrna1;Target=comp135246_c0_seq1 266 386 .
Chr1	stalkie_big_nohaplotig	CDS	33945545	33945635	.	-	0	Parent=comp135246_c0_seq1.mrna1;Target=comp135246_c0_seq1 387 477 .
Chr1	gffcl	locus	33948541	33949533	.	-	.	ID=RLOC_00007049;geneIDs=comp144665_c0_seq1.path1;transcripts=comp144665_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33948541	33949533	.	-	.	ID=comp144665_c0_seq1.mrna1;geneID=comp144665_c0_seq1.path1;Name=comp144665_c0_seq1;Dir=sensecoverage=96.3;identity=98.8;matches=562;mismatches=7;indels=0;unknowns=0;locus=RLOC_00007049
Chr1	stalkie_big_nohaplotig	exon	33948541	33948773	99	-	.	Parent=comp144665_c0_seq1.mrna1;Target=comp144665_c0_seq1 359 591 +
Chr1	stalkie_big_nohaplotig	exon	33948882	33948999	97	-	.	Parent=comp144665_c0_seq1.mrna1;Target=comp144665_c0_seq1 241 358 +
Chr1	stalkie_big_nohaplotig	exon	33949316	33949533	99	-	.	Parent=comp144665_c0_seq1.mrna1;Target=comp144665_c0_seq1 23 240 +
Chr1	stalkie_big_nohaplotig	CDS	33948671	33948773	.	-	1	Parent=comp144665_c0_seq1.mrna1;Target=comp144665_c0_seq1 359 461 +
Chr1	stalkie_big_nohaplotig	CDS	33948882	33948999	.	-	2	Parent=comp144665_c0_seq1.mrna1;Target=comp144665_c0_seq1 241 358 +
Chr1	stalkie_big_nohaplotig	CDS	33949316	33949493	.	-	0	Parent=comp144665_c0_seq1.mrna1;Target=comp144665_c0_seq1 63 240 +
Chr1	gffcl	locus	33956253	33957068	.	-	.	ID=RLOC_00007050;geneIDs=comp148159_c0_seq1.path1;transcripts=comp148159_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33956253	33957068	.	-	.	ID=comp148159_c0_seq1.mrna1;geneID=comp148159_c0_seq1.path1;Name=comp148159_c0_seq1;Dir=antisensecoverage=100.0;identity=97.6;matches=602;mismatches=14;indels=1;unknowns=0;locus=RLOC_00007050
Chr1	stalkie_big_nohaplotig	exon	33956253	33956583	97	-	.	Parent=comp148159_c0_seq1.mrna1;Target=comp148159_c0_seq1 1 332 -
Chr1	stalkie_big_nohaplotig	exon	33956660	33956780	96	-	.	Parent=comp148159_c0_seq1.mrna1;Target=comp148159_c0_seq1 333 453 -
Chr1	stalkie_big_nohaplotig	exon	33956905	33957068	98	-	.	Parent=comp148159_c0_seq1.mrna1;Target=comp148159_c0_seq1 454 617 -
Chr1	stalkie_big_nohaplotig	CDS	33956487	33956583	.	-	1	Parent=comp148159_c0_seq1.mrna1;Target=comp148159_c0_seq1 236 332 .
Chr1	stalkie_big_nohaplotig	CDS	33956660	33956780	.	-	2	Parent=comp148159_c0_seq1.mrna1;Target=comp148159_c0_seq1 333 453 .
Chr1	stalkie_big_nohaplotig	CDS	33956905	33956995	.	-	0	Parent=comp148159_c0_seq1.mrna1;Target=comp148159_c0_seq1 454 544 .
Chr1	gffcl	locus	33961816	33962420	.	-	.	ID=RLOC_00007051;geneIDs=comp135038_c0_seq1.path1;transcripts=comp135038_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33961816	33962420	.	-	.	ID=comp135038_c0_seq1.mrna1;geneID=comp135038_c0_seq1.path1;Name=comp135038_c0_seq1;Dir=sensecoverage=84.8;identity=99.0;matches=518;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007051
Chr1	stalkie_big_nohaplotig	exon	33961816	33962152	99	-	.	Parent=comp135038_c0_seq1.mrna1;Target=comp135038_c0_seq1 187 523 +
Chr1	stalkie_big_nohaplotig	exon	33962235	33962420	98	-	.	Parent=comp135038_c0_seq1.mrna1;Target=comp135038_c0_seq1 1 186 +
Chr1	stalkie_big_nohaplotig	CDS	33961932	33962152	.	-	2	Parent=comp135038_c0_seq1.mrna1;Target=comp135038_c0_seq1 187 407 +
Chr1	stalkie_big_nohaplotig	CDS	33962235	33962325	.	-	0	Parent=comp135038_c0_seq1.mrna1;Target=comp135038_c0_seq1 96 186 +
Chr1	gffcl	locus	33965294	33966191	.	-	.	ID=RLOC_00007052;geneIDs=comp148355_c0_seq1.path1;transcripts=comp148355_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33965294	33966191	.	-	.	ID=comp148355_c0_seq1.mrna1;geneID=comp148355_c0_seq1.path1;Name=comp148355_c0_seq1;Dir=antisensecoverage=100.0;identity=98.0;matches=817;mismatches=6;indels=11;unknowns=0;locus=RLOC_00007052
Chr1	stalkie_big_nohaplotig	exon	33965294	33965741	96	-	.	Parent=comp148355_c0_seq1.mrna1;Target=comp148355_c0_seq1 1 455 -
Chr1	stalkie_big_nohaplotig	exon	33965815	33966191	100	-	.	Parent=comp148355_c0_seq1.mrna1;Target=comp148355_c0_seq1 456 832 -
Chr1	stalkie_big_nohaplotig	CDS	33965509	33965741	.	-	2	Parent=comp148355_c0_seq1.mrna1;Target=comp148355_c0_seq1 214 455 .
Chr1	stalkie_big_nohaplotig	CDS	33965815	33965905	.	-	0	Parent=comp148355_c0_seq1.mrna1;Target=comp148355_c0_seq1 456 546 .
Chr1	gffcl	locus	33966438	33967076	.	+	.	ID=RLOC_00007053;geneIDs=comp83668_c0_seq1.path1;transcripts=comp83668_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33966438	33967076	.	+	.	ID=comp83668_c0_seq1.mrna1;geneID=comp83668_c0_seq1.path1;Name=comp83668_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=638;mismatches=1;indels=8;unknowns=0;Target=comp83668_c0_seq1 647 1 .;CDS_Target=comp83668_c0_seq1 107 3 .;locus=RLOC_00007053
Chr1	stalkie_big_nohaplotig	exon	33966438	33967076	98	+	.	Parent=comp83668_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	33966440	33966544	.	+	0	Parent=comp83668_c0_seq1.mrna1
Chr1	gffcl	locus	33974222	33997694	.	-	.	ID=RLOC_00007054;geneIDs=FBgn0036714.1.path1;transcripts=FBgn0036714.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33974222	33997694	.	-	.	ID=FBgn0036714.1.mrna1;geneID=FBgn0036714.1.path1;Name=FBgn0036714.1;Dir=sensecoverage=100.0;identity=99.3;matches=5638;mismatches=35;indels=3;unknowns=0;locus=RLOC_00007054
Chr1	stalkie_big_nohaplotig	exon	33974222	33974634	100	-	.	Parent=FBgn0036714.1.mrna1;Target=FBgn0036714.1 5264 5676 +
Chr1	stalkie_big_nohaplotig	exon	33974698	33974986	99	-	.	Parent=FBgn0036714.1.mrna1;Target=FBgn0036714.1 4975 5263 +
Chr1	stalkie_big_nohaplotig	exon	33976965	33978042	97	-	.	Parent=FBgn0036714.1.mrna1;Target=FBgn0036714.1 3894 4974 +
Chr1	stalkie_big_nohaplotig	exon	33992206	33992540	99	-	.	Parent=FBgn0036714.1.mrna1;Target=FBgn0036714.1 3559 3893 +
Chr1	stalkie_big_nohaplotig	exon	33992778	33992812	100	-	.	Parent=FBgn0036714.1.mrna1;Target=FBgn0036714.1 3524 3558 +
Chr1	stalkie_big_nohaplotig	exon	33993855	33995120	100	-	.	Parent=FBgn0036714.1.mrna1;Target=FBgn0036714.1 2258 3523 +
Chr1	stalkie_big_nohaplotig	exon	33995178	33996015	99	-	.	Parent=FBgn0036714.1.mrna1;Target=FBgn0036714.1 1420 2257 +
Chr1	stalkie_big_nohaplotig	exon	33996088	33996690	99	-	.	Parent=FBgn0036714.1.mrna1;Target=FBgn0036714.1 817 1419 +
Chr1	stalkie_big_nohaplotig	exon	33996746	33997020	100	-	.	Parent=FBgn0036714.1.mrna1;Target=FBgn0036714.1 542 816 +
Chr1	stalkie_big_nohaplotig	exon	33997085	33997535	100	-	.	Parent=FBgn0036714.1.mrna1;Target=FBgn0036714.1 91 541 +
Chr1	stalkie_big_nohaplotig	exon	33997605	33997694	100	-	.	Parent=FBgn0036714.1.mrna1;Target=FBgn0036714.1 1 90 +
Chr1	stalkie_big_nohaplotig	CDS	33974222	33974634	.	-	2	Parent=FBgn0036714.1.mrna1;Target=FBgn0036714.1 5264 5676 +
Chr1	stalkie_big_nohaplotig	CDS	33974698	33974986	.	-	0	Parent=FBgn0036714.1.mrna1;Target=FBgn0036714.1 4975 5263 +
Chr1	stalkie_big_nohaplotig	CDS	33976965	33978042	.	-	1	Parent=FBgn0036714.1.mrna1;Target=FBgn0036714.1 3894 4974 +
Chr1	stalkie_big_nohaplotig	CDS	33992206	33992540	.	-	0	Parent=FBgn0036714.1.mrna1;Target=FBgn0036714.1 3559 3893 +
Chr1	stalkie_big_nohaplotig	CDS	33992778	33992812	.	-	2	Parent=FBgn0036714.1.mrna1;Target=FBgn0036714.1 3524 3558 +
Chr1	stalkie_big_nohaplotig	CDS	33993855	33995120	.	-	2	Parent=FBgn0036714.1.mrna1;Target=FBgn0036714.1 2258 3523 +
Chr1	stalkie_big_nohaplotig	CDS	33995178	33996015	.	-	0	Parent=FBgn0036714.1.mrna1;Target=FBgn0036714.1 1420 2257 +
Chr1	stalkie_big_nohaplotig	CDS	33996088	33996690	.	-	0	Parent=FBgn0036714.1.mrna1;Target=FBgn0036714.1 817 1419 +
Chr1	stalkie_big_nohaplotig	CDS	33996746	33997020	.	-	2	Parent=FBgn0036714.1.mrna1;Target=FBgn0036714.1 542 816 +
Chr1	stalkie_big_nohaplotig	CDS	33997085	33997535	.	-	0	Parent=FBgn0036714.1.mrna1;Target=FBgn0036714.1 91 541 +
Chr1	stalkie_big_nohaplotig	CDS	33997605	33997694	.	-	0	Parent=FBgn0036714.1.mrna1;Target=FBgn0036714.1 1 90 +
Chr1	gffcl	locus	33998101	33999635	.	+	.	ID=RLOC_00007055;geneIDs=comp136194_c0_seq1.path1;transcripts=comp136194_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	33998101	33999635	.	+	.	ID=comp136194_c0_seq1.mrna1;geneID=comp136194_c0_seq1.path1;Name=comp136194_c0_seq1;Dir=sensecoverage=99.8;identity=91.4;matches=588;mismatches=22;indels=33;unknowns=0;locus=RLOC_00007055
Chr1	stalkie_big_nohaplotig	exon	33998101	33998217	100	+	.	Parent=comp136194_c0_seq1.mrna1;Target=comp136194_c0_seq1 1 117 +
Chr1	stalkie_big_nohaplotig	exon	33998924	33998980	98	+	.	Parent=comp136194_c0_seq1.mrna1;Target=comp136194_c0_seq1 118 174 +
Chr1	stalkie_big_nohaplotig	exon	33999194	33999635	88	+	.	Parent=comp136194_c0_seq1.mrna1;Target=comp136194_c0_seq1 175 637 +
Chr1	stalkie_big_nohaplotig	CDS	33998953	33998980	.	+	0	Parent=comp136194_c0_seq1.mrna1;Target=comp136194_c0_seq1 147 174 +
Chr1	stalkie_big_nohaplotig	CDS	33999194	33999276	.	+	2	Parent=comp136194_c0_seq1.mrna1;Target=comp136194_c0_seq1 175 257 +
Chr1	gffcl	locus	34062047	34124729	.	-	.	ID=RLOC_00007056;geneIDs=comp163358_c0_seq1.path1;transcripts=comp163358_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34062047	34124729	.	-	.	ID=comp163358_c0_seq1.mrna1;geneID=comp163358_c0_seq1.path1;Name=comp163358_c0_seq1;Dir=indeterminatecoverage=98.2;identity=88.2;matches=2273;mismatches=83;indels=221;unknowns=0;Target=comp163358_c0_seq1 2028 1915 .;locus=RLOC_00007056
Chr1	stalkie_big_nohaplotig	exon	34062047	34063735	93	-	.	Parent=comp163358_c0_seq1.mrna1;Target=comp163358_c0_seq1 2650 916 .
Chr1	stalkie_big_nohaplotig	exon	34063795	34064294	91	-	.	Parent=comp163358_c0_seq1.mrna1;Target=comp163358_c0_seq1 915 387 .
Chr1	stalkie_big_nohaplotig	exon	34065841	34065842	100	-	.	Parent=comp163358_c0_seq1.mrna1;Target=comp163358_c0_seq1 386 385 .
Chr1	stalkie_big_nohaplotig	exon	34070073	34070075	100	-	.	Parent=comp163358_c0_seq1.mrna1;Target=comp163358_c0_seq1 384 382 .
Chr1	stalkie_big_nohaplotig	exon	34070486	34070494	100	-	.	Parent=comp163358_c0_seq1.mrna1;Target=comp163358_c0_seq1 375 367 .
Chr1	stalkie_big_nohaplotig	exon	34071078	34071112	34	-	.	Parent=comp163358_c0_seq1.mrna1;Target=comp163358_c0_seq1 365 273 .
Chr1	stalkie_big_nohaplotig	exon	34072412	34072435	33	-	.	Parent=comp163358_c0_seq1.mrna1;Target=comp163358_c0_seq1 233 168 .
Chr1	stalkie_big_nohaplotig	exon	34073034	34073043	100	-	.	Parent=comp163358_c0_seq1.mrna1;Target=comp163358_c0_seq1 167 158 .
Chr1	stalkie_big_nohaplotig	exon	34075587	34075592	100	-	.	Parent=comp163358_c0_seq1.mrna1;Target=comp163358_c0_seq1 157 152 .
Chr1	stalkie_big_nohaplotig	exon	34077389	34077423	11	-	.	Parent=comp163358_c0_seq1.mrna1;Target=comp163358_c0_seq1 151 148 .
Chr1	stalkie_big_nohaplotig	exon	34081464	34081474	100	-	.	Parent=comp163358_c0_seq1.mrna1;Target=comp163358_c0_seq1 128 118 .
Chr1	stalkie_big_nohaplotig	exon	34081587	34081595	100	-	.	Parent=comp163358_c0_seq1.mrna1;Target=comp163358_c0_seq1 117 109 .
Chr1	stalkie_big_nohaplotig	exon	34083466	34083470	100	-	.	Parent=comp163358_c0_seq1.mrna1;Target=comp163358_c0_seq1 108 104 .
Chr1	stalkie_big_nohaplotig	exon	34089730	34089734	100	-	.	Parent=comp163358_c0_seq1.mrna1;Target=comp163358_c0_seq1 103 99 .
Chr1	stalkie_big_nohaplotig	exon	34093896	34093897	100	-	.	Parent=comp163358_c0_seq1.mrna1;Target=comp163358_c0_seq1 98 97 .
Chr1	stalkie_big_nohaplotig	exon	34103021	34103030	100	-	.	Parent=comp163358_c0_seq1.mrna1;Target=comp163358_c0_seq1 96 87 .
Chr1	stalkie_big_nohaplotig	exon	34109069	34109088	76	-	.	Parent=comp163358_c0_seq1.mrna1;Target=comp163358_c0_seq1 86 66 .
Chr1	stalkie_big_nohaplotig	exon	34111097	34111099	100	-	.	Parent=comp163358_c0_seq1.mrna1;Target=comp163358_c0_seq1 65 63 .
Chr1	stalkie_big_nohaplotig	exon	34121573	34121577	100	-	.	Parent=comp163358_c0_seq1.mrna1;Target=comp163358_c0_seq1 62 58 .
Chr1	stalkie_big_nohaplotig	exon	34124719	34124729	100	-	.	Parent=comp163358_c0_seq1.mrna1;Target=comp163358_c0_seq1 57 47 .
Chr1	stalkie_big_nohaplotig	CDS	34062649	34062762	.	-	0	Parent=comp163358_c0_seq1.mrna1
Chr1	gffcl	locus	34069301	34072372	.	+	.	ID=RLOC_00007057;geneIDs=comp150740_c1_seq1.path2;transcripts=comp150740_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	34069301	34072372	.	+	.	ID=comp150740_c1_seq1.mrna2;geneID=comp150740_c1_seq1.path2;Name=comp150740_c1_seq1;Dir=sensecoverage=87.3;identity=95.6;matches=718;mismatches=31;indels=2;unknowns=0;locus=RLOC_00007057
Chr1	stalkie_big_nohaplotig	exon	34069301	34069387	94	+	.	Parent=comp150740_c1_seq1.mrna2;Target=comp150740_c1_seq1 110 194 +
Chr1	stalkie_big_nohaplotig	exon	34071583	34072031	95	+	.	Parent=comp150740_c1_seq1.mrna2;Target=comp150740_c1_seq1 195 643 +
Chr1	stalkie_big_nohaplotig	exon	34072158	34072372	97	+	.	Parent=comp150740_c1_seq1.mrna2;Target=comp150740_c1_seq1 644 858 +
Chr1	stalkie_big_nohaplotig	CDS	34071998	34072031	.	+	0	Parent=comp150740_c1_seq1.mrna2;Target=comp150740_c1_seq1 610 643 +
Chr1	stalkie_big_nohaplotig	CDS	34072158	34072234	.	+	2	Parent=comp150740_c1_seq1.mrna2;Target=comp150740_c1_seq1 644 720 +
Chr1	gffcl	locus	34073454	34074184	.	-	.	ID=RLOC_00007058;geneIDs=FBgn0036713.1.path1;transcripts=FBgn0036713.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34073454	34074184	.	-	.	ID=FBgn0036713.1.mrna1;geneID=FBgn0036713.1.path1;Name=FBgn0036713.1;Dir=sensecoverage=100.0;identity=99.4;matches=665;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007058
Chr1	stalkie_big_nohaplotig	exon	34073454	34073581	100	-	.	Parent=FBgn0036713.1.mrna1;Target=FBgn0036713.1 542 669 +
Chr1	stalkie_big_nohaplotig	exon	34073644	34074184	99	-	.	Parent=FBgn0036713.1.mrna1;Target=FBgn0036713.1 1 541 +
Chr1	stalkie_big_nohaplotig	CDS	34073454	34073581	.	-	2	Parent=FBgn0036713.1.mrna1;Target=FBgn0036713.1 542 669 +
Chr1	stalkie_big_nohaplotig	CDS	34073644	34074184	.	-	0	Parent=FBgn0036713.1.mrna1;Target=FBgn0036713.1 1 541 +
Chr1	gffcl	locus	34125092	34169735	.	+	.	ID=RLOC_00007059;geneIDs=FBgn0027660.1.path1;transcripts=FBgn0027660.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34125092	34169735	.	+	.	ID=FBgn0027660.1.mrna1;geneID=FBgn0027660.1.path1;Name=FBgn0027660.1;Dir=sensecoverage=100.0;identity=99.5;matches=2936;mismatches=16;indels=0;unknowns=0;locus=RLOC_00007059
Chr1	stalkie_big_nohaplotig	exon	34125092	34125787	99	+	.	Parent=FBgn0027660.1.mrna1;Target=FBgn0027660.1 1 696 +
Chr1	stalkie_big_nohaplotig	exon	34159954	34160185	99	+	.	Parent=FBgn0027660.1.mrna1;Target=FBgn0027660.1 697 928 +
Chr1	stalkie_big_nohaplotig	exon	34167560	34167705	99	+	.	Parent=FBgn0027660.1.mrna1;Target=FBgn0027660.1 929 1074 +
Chr1	stalkie_big_nohaplotig	exon	34167798	34167934	100	+	.	Parent=FBgn0027660.1.mrna1;Target=FBgn0027660.1 1075 1211 +
Chr1	stalkie_big_nohaplotig	exon	34167995	34169735	99	+	.	Parent=FBgn0027660.1.mrna1;Target=FBgn0027660.1 1212 2952 +
Chr1	stalkie_big_nohaplotig	CDS	34125092	34125787	.	+	0	Parent=FBgn0027660.1.mrna1;Target=FBgn0027660.1 1 696 +
Chr1	stalkie_big_nohaplotig	CDS	34159954	34160185	.	+	0	Parent=FBgn0027660.1.mrna1;Target=FBgn0027660.1 697 928 +
Chr1	stalkie_big_nohaplotig	CDS	34167560	34167705	.	+	2	Parent=FBgn0027660.1.mrna1;Target=FBgn0027660.1 929 1074 +
Chr1	stalkie_big_nohaplotig	CDS	34167798	34167934	.	+	0	Parent=FBgn0027660.1.mrna1;Target=FBgn0027660.1 1075 1211 +
Chr1	stalkie_big_nohaplotig	CDS	34167995	34169735	.	+	1	Parent=FBgn0027660.1.mrna1;Target=FBgn0027660.1 1212 2952 +
Chr1	gffcl	locus	34162709	34163776	.	-	.	ID=RLOC_00007060;geneIDs=ORF1536.path1;transcripts=ORF1536.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34162709	34163776	.	-	.	ID=ORF1536.mrna1;geneID=ORF1536.path1;Name=ORF1536;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1059;mismatches=9;indels=0;unknowns=0;Target=ORF1536 1068 1 .;locus=RLOC_00007060
Chr1	stalkie_big_nohaplotig	exon	34162709	34163776	99	-	.	Parent=ORF1536.mrna1
Chr1	stalkie_big_nohaplotig	CDS	34162709	34163776	.	-	0	Parent=ORF1536.mrna1
Chr1	gffcl	locus	34164364	34165342	.	+	.	ID=RLOC_00007061;geneIDs=comp167155_c0_seq1.path1;transcripts=comp167155_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34164364	34165342	.	+	.	ID=comp167155_c0_seq1.mrna1;geneID=comp167155_c0_seq1.path1;Name=comp167155_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.4;matches=973;mismatches=6;indels=0;unknowns=0;Target=comp167155_c0_seq1 979 1 .;CDS_Target=comp167155_c0_seq1 691 434 .;locus=RLOC_00007061
Chr1	stalkie_big_nohaplotig	exon	34164364	34165342	99	+	.	Parent=comp167155_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	34164797	34165054	.	+	0	Parent=comp167155_c0_seq1.mrna1
Chr1	gffcl	locus	34213635	34223341	.	+	.	ID=RLOC_00007062;geneIDs=comp118565_c0_seq1.path1;transcripts=comp118565_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34213635	34223341	.	+	.	ID=comp118565_c0_seq1.mrna1;geneID=comp118565_c0_seq1.path1;Name=comp118565_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=504;mismatches=1;indels=0;unknowns=0;Target=comp118565_c0_seq1 3 95 .;locus=RLOC_00007062
Chr1	stalkie_big_nohaplotig	exon	34213635	34213893	99	+	.	Parent=comp118565_c0_seq1.mrna1;Target=comp118565_c0_seq1 247 505 -
Chr1	stalkie_big_nohaplotig	exon	34223096	34223341	100	+	.	Parent=comp118565_c0_seq1.mrna1;Target=comp118565_c0_seq1 1 246 -
Chr1	stalkie_big_nohaplotig	CDS	34223247	34223339	.	+	0	Parent=comp118565_c0_seq1.mrna1
Chr1	gffcl	locus	34220866	34290440	.	+	.	ID=RLOC_00007063;geneIDs=comp150987_c0_seq1.path1;transcripts=comp150987_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34220866	34290440	.	+	.	ID=comp150987_c0_seq1.mrna1;geneID=comp150987_c0_seq1.path1;Name=comp150987_c0_seq1;Dir=indeterminatecoverage=88.4;identity=99.3;matches=898;mismatches=5;indels=1;unknowns=0;locus=RLOC_00007063
Chr1	stalkie_big_nohaplotig	exon	34220866	34220875	100	+	.	Parent=comp150987_c0_seq1.mrna1;Target=comp150987_c0_seq1 124 115 .
Chr1	stalkie_big_nohaplotig	exon	34236745	34236749	100	+	.	Parent=comp150987_c0_seq1.mrna1;Target=comp150987_c0_seq1 129 125 .
Chr1	stalkie_big_nohaplotig	exon	34237924	34237925	100	+	.	Parent=comp150987_c0_seq1.mrna1;Target=comp150987_c0_seq1 131 130 .
Chr1	stalkie_big_nohaplotig	exon	34278303	34278315	100	+	.	Parent=comp150987_c0_seq1.mrna1;Target=comp150987_c0_seq1 144 132 .
Chr1	stalkie_big_nohaplotig	exon	34289567	34290440	99	+	.	Parent=comp150987_c0_seq1.mrna1;Target=comp150987_c0_seq1 1017 145 .
Chr1	stalkie_big_nohaplotig	CDS	34220868	34220875	.	+	0	Parent=comp150987_c0_seq1.mrna1;Target=comp150987_c0_seq1 124 117 .
Chr1	stalkie_big_nohaplotig	CDS	34236745	34236749	.	+	1	Parent=comp150987_c0_seq1.mrna1;Target=comp150987_c0_seq1 129 125 .
Chr1	stalkie_big_nohaplotig	CDS	34237924	34237925	.	+	2	Parent=comp150987_c0_seq1.mrna1;Target=comp150987_c0_seq1 131 130 .
Chr1	stalkie_big_nohaplotig	CDS	34278303	34278315	.	+	0	Parent=comp150987_c0_seq1.mrna1;Target=comp150987_c0_seq1 144 132 .
Chr1	stalkie_big_nohaplotig	CDS	34289567	34289692	.	+	2	Parent=comp150987_c0_seq1.mrna1;Target=comp150987_c0_seq1 269 145 .
Chr1	gffcl	locus	34223560	34223985	.	-	.	ID=RLOC_00007064;geneIDs=comp153186_c0_seq1.path2,comp611587_c0_seq1.path1;transcripts=comp611587_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34223560	34223821	.	-	.	ID=comp611587_c0_seq1.mrna1;geneID=comp611587_c0_seq1.path1;Name=comp611587_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=262;mismatches=0;indels=0;unknowns=0;Target=comp611587_c0_seq1 262 1 .;CDS_Target=comp611587_c0_seq1 84 1 .;locus=RLOC_00007064
Chr1	stalkie_big_nohaplotig	exon	34223560	34223821	100	-	.	Parent=comp611587_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	34223738	34223821	.	-	0	Parent=comp611587_c0_seq1.mrna1
Chr1	gffcl	locus	34225982	34226535	.	-	.	ID=RLOC_00007065;geneIDs=comp146595_c0_seq1.path1;transcripts=comp146595_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34225982	34226535	.	-	.	ID=comp146595_c0_seq1.mrna1;geneID=comp146595_c0_seq1.path1;Name=comp146595_c0_seq1;Dir=indeterminatecoverage=97.4;identity=99.8;matches=553;mismatches=1;indels=0;unknowns=0;Target=comp146595_c0_seq1 555 2 .;CDS_Target=comp146595_c0_seq1 100 2 .;locus=RLOC_00007065
Chr1	stalkie_big_nohaplotig	exon	34225982	34226535	99	-	.	Parent=comp146595_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	34226437	34226535	.	-	0	Parent=comp146595_c0_seq1.mrna1
Chr1	gffcl	locus	34238661	34246300	.	+	.	ID=RLOC_00007066;geneIDs=comp149881_c0_seq1.path1;transcripts=comp149881_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34238661	34246300	.	+	.	ID=comp149881_c0_seq1.mrna1;geneID=comp149881_c0_seq1.path1;Name=comp149881_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=604;mismatches=1;indels=3;unknowns=0;locus=RLOC_00007066
Chr1	stalkie_big_nohaplotig	exon	34238661	34238681	100	+	.	Parent=comp149881_c0_seq1.mrna1;Target=comp149881_c0_seq1 1 21 +
Chr1	stalkie_big_nohaplotig	exon	34245714	34246300	99	+	.	Parent=comp149881_c0_seq1.mrna1;Target=comp149881_c0_seq1 22 605 +
Chr1	stalkie_big_nohaplotig	CDS	34238662	34238681	.	+	0	Parent=comp149881_c0_seq1.mrna1;Target=comp149881_c0_seq1 2 21 +
Chr1	stalkie_big_nohaplotig	CDS	34245714	34245762	.	+	1	Parent=comp149881_c0_seq1.mrna1;Target=comp149881_c0_seq1 22 67 +
Chr1	gffcl	locus	34246355	34246577	.	+	.	ID=RLOC_00007067;geneIDs=FBgn0036715.1.path1;transcripts=FBgn0036715.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34246355	34246577	.	+	.	ID=FBgn0036715.1.mrna1;geneID=FBgn0036715.1.path1;Name=FBgn0036715.1;Dir=indeterminatecoverage=4.0;identity=99.6;matches=222;mismatches=1;indels=0;unknowns=0;Target=FBgn0036715.1 223 1 .;locus=RLOC_00007067
Chr1	stalkie_big_nohaplotig	exon	34246355	34246577	99	+	.	Parent=FBgn0036715.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	34246355	34246577	.	+	0	Parent=FBgn0036715.1.mrna1
Chr1	gffcl	locus	34252219	34257850	.	-	.	ID=RLOC_00007068;geneIDs=comp154386_c0_seq1.path1;transcripts=comp154386_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34252219	34257850	.	-	.	ID=comp154386_c0_seq1.mrna1;geneID=comp154386_c0_seq1.path1;Name=comp154386_c0_seq1;Dir=sensecoverage=74.4;identity=99.6;matches=2150;mismatches=4;indels=4;unknowns=0;locus=RLOC_00007068
Chr1	stalkie_big_nohaplotig	exon	34252219	34254062	99	-	.	Parent=comp154386_c0_seq1.mrna1;Target=comp154386_c0_seq1 315 2157 +
Chr1	stalkie_big_nohaplotig	exon	34257376	34257553	99	-	.	Parent=comp154386_c0_seq1.mrna1;Target=comp154386_c0_seq1 137 314 +
Chr1	stalkie_big_nohaplotig	exon	34257717	34257850	99	-	.	Parent=comp154386_c0_seq1.mrna1;Target=comp154386_c0_seq1 2 136 +
Chr1	stalkie_big_nohaplotig	CDS	34253470	34254062	.	-	2	Parent=comp154386_c0_seq1.mrna1;Target=comp154386_c0_seq1 315 907 +
Chr1	stalkie_big_nohaplotig	CDS	34257376	34257448	.	-	0	Parent=comp154386_c0_seq1.mrna1;Target=comp154386_c0_seq1 242 314 +
Chr1	gffcl	locus	34272140	34273524	.	+	.	ID=RLOC_00007069;geneIDs=FBgn0036623.1.path1;transcripts=FBgn0036623.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34272140	34273524	.	+	.	ID=FBgn0036623.1.mrna1;geneID=FBgn0036623.1.path1;Name=FBgn0036623.1;Dir=sensecoverage=100.0;identity=99.8;matches=1186;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007069
Chr1	stalkie_big_nohaplotig	exon	34272140	34272347	100	+	.	Parent=FBgn0036623.1.mrna1;Target=FBgn0036623.1 1 208 +
Chr1	stalkie_big_nohaplotig	exon	34272417	34272952	99	+	.	Parent=FBgn0036623.1.mrna1;Target=FBgn0036623.1 209 744 +
Chr1	stalkie_big_nohaplotig	exon	34273018	34273375	100	+	.	Parent=FBgn0036623.1.mrna1;Target=FBgn0036623.1 745 1102 +
Chr1	stalkie_big_nohaplotig	exon	34273439	34273524	100	+	.	Parent=FBgn0036623.1.mrna1;Target=FBgn0036623.1 1103 1188 +
Chr1	stalkie_big_nohaplotig	CDS	34272140	34272347	.	+	0	Parent=FBgn0036623.1.mrna1;Target=FBgn0036623.1 1 208 +
Chr1	stalkie_big_nohaplotig	CDS	34272417	34272952	.	+	2	Parent=FBgn0036623.1.mrna1;Target=FBgn0036623.1 209 744 +
Chr1	stalkie_big_nohaplotig	CDS	34273018	34273375	.	+	0	Parent=FBgn0036623.1.mrna1;Target=FBgn0036623.1 745 1102 +
Chr1	stalkie_big_nohaplotig	CDS	34273439	34273524	.	+	2	Parent=FBgn0036623.1.mrna1;Target=FBgn0036623.1 1103 1188 +
Chr1	gffcl	locus	34295572	34296453	.	-	.	ID=RLOC_00007070;geneIDs=FBgn0032465.1.path1;transcripts=FBgn0032465.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34295572	34296453	.	-	.	ID=FBgn0032465.1.mrna1;geneID=FBgn0032465.1.path1;Name=FBgn0032465.1;Dir=sensecoverage=100.0;identity=99.9;matches=821;mismatches=0;indels=1;unknowns=0;Target=FBgn0032465.1 72 89 +;locus=RLOC_00007070
Chr1	stalkie_big_nohaplotig	exon	34295572	34296346	99	-	.	Parent=FBgn0032465.1.mrna1;Target=FBgn0032465.1 47 822 +
Chr1	stalkie_big_nohaplotig	exon	34296408	34296453	100	-	.	Parent=FBgn0032465.1.mrna1;Target=FBgn0032465.1 1 46 +
Chr1	stalkie_big_nohaplotig	CDS	34296305	34296321	.	-	0	Parent=FBgn0032465.1.mrna1
Chr1	gffcl	locus	34297346	34297706	.	+	.	ID=RLOC_00007071;geneIDs=comp71547_c0_seq1.path1;transcripts=comp71547_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34297346	34297706	.	+	.	ID=comp71547_c0_seq1.mrna1;geneID=comp71547_c0_seq1.path1;Name=comp71547_c0_seq1;Dir=indeterminatecoverage=97.6;identity=100.0;matches=361;mismatches=0;indels=0;unknowns=0;Target=comp71547_c0_seq1 370 10 .;CDS_Target=comp71547_c0_seq1 67 11 .;locus=RLOC_00007071
Chr1	stalkie_big_nohaplotig	exon	34297346	34297706	100	+	.	Parent=comp71547_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	34297347	34297403	.	+	0	Parent=comp71547_c0_seq1.mrna1
Chr1	gffcl	locus	34306739	34307832	.	-	.	ID=RLOC_00007072;geneIDs=comp116951_c0_seq1.path1;transcripts=comp116951_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34306739	34307832	.	-	.	ID=comp116951_c0_seq1.mrna1;geneID=comp116951_c0_seq1.path1;Name=comp116951_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1092;mismatches=2;indels=0;unknowns=0;Target=comp116951_c0_seq1 1094 1 .;CDS_Target=comp116951_c0_seq1 129 31 .;locus=RLOC_00007072
Chr1	stalkie_big_nohaplotig	exon	34306739	34307832	99	-	.	Parent=comp116951_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	34307704	34307802	.	-	0	Parent=comp116951_c0_seq1.mrna1
Chr1	gffcl	locus	34308784	34310819	.	-	.	ID=RLOC_00007073;geneIDs=FBgn0020388.path1,comp377184_c0_seq1.path1;transcripts=FBgn0020388.mrna1,comp377184_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34308784	34310819	.	-	.	ID=FBgn0020388.mrna1;geneID=FBgn0020388.path1;Name=FBgn0020388;Dir=sensecoverage=100.0;identity=99.9;matches=1346;mismatches=0;indels=1;unknowns=0;locus=RLOC_00007073
Chr1	stalkie_big_nohaplotig	exon	34308784	34309295	100	-	.	Parent=FBgn0020388.mrna1;Target=FBgn0020388 836 1347 +
Chr1	stalkie_big_nohaplotig	exon	34309364	34310019	100	-	.	Parent=FBgn0020388.mrna1;Target=FBgn0020388 180 835 +
Chr1	stalkie_big_nohaplotig	exon	34310642	34310819	99	-	.	Parent=FBgn0020388.mrna1;Target=FBgn0020388 1 179 +
Chr1	stalkie_big_nohaplotig	CDS	34310005	34310019	.	-	1	Parent=FBgn0020388.mrna1;Target=FBgn0020388 180 194 +
Chr1	stalkie_big_nohaplotig	CDS	34310642	34310817	.	-	0	Parent=FBgn0020388.mrna1;Target=FBgn0020388 3 179 +
Chr1	stalkie_big_nohaplotig	mRNA	34310162	34310665	.	-	.	ID=comp377184_c0_seq1.mrna1;geneID=comp377184_c0_seq1.path1;Name=comp377184_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=503;mismatches=1;indels=0;unknowns=0;Target=comp377184_c0_seq1 504 1 .;CDS_Target=comp377184_c0_seq1 502 410 .;locus=RLOC_00007073
Chr1	stalkie_big_nohaplotig	exon	34310162	34310665	99	-	.	Parent=comp377184_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	34310164	34310256	.	-	0	Parent=comp377184_c0_seq1.mrna1
Chr1	gffcl	locus	34313657	34318086	.	+	.	ID=RLOC_00007074;geneIDs=FBgn0086475.1.path1;transcripts=FBgn0086475.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34313657	34318086	.	+	.	ID=FBgn0086475.1.mrna1;geneID=FBgn0086475.1.path1;Name=FBgn0086475.1;Dir=sensecoverage=100.0;identity=100.0;matches=2687;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007074
Chr1	stalkie_big_nohaplotig	exon	34313657	34314322	99	+	.	Parent=FBgn0086475.1.mrna1;Target=FBgn0086475.1 1 666 +
Chr1	stalkie_big_nohaplotig	exon	34314392	34314619	100	+	.	Parent=FBgn0086475.1.mrna1;Target=FBgn0086475.1 667 894 +
Chr1	stalkie_big_nohaplotig	exon	34314687	34315136	100	+	.	Parent=FBgn0086475.1.mrna1;Target=FBgn0086475.1 895 1344 +
Chr1	stalkie_big_nohaplotig	exon	34316506	34316863	100	+	.	Parent=FBgn0086475.1.mrna1;Target=FBgn0086475.1 1345 1702 +
Chr1	stalkie_big_nohaplotig	exon	34316920	34317049	100	+	.	Parent=FBgn0086475.1.mrna1;Target=FBgn0086475.1 1703 1832 +
Chr1	stalkie_big_nohaplotig	exon	34317130	34317640	100	+	.	Parent=FBgn0086475.1.mrna1;Target=FBgn0086475.1 1833 2343 +
Chr1	stalkie_big_nohaplotig	exon	34317742	34318086	100	+	.	Parent=FBgn0086475.1.mrna1;Target=FBgn0086475.1 2344 2688 +
Chr1	stalkie_big_nohaplotig	CDS	34313657	34314322	.	+	0	Parent=FBgn0086475.1.mrna1;Target=FBgn0086475.1 1 666 +
Chr1	stalkie_big_nohaplotig	CDS	34314392	34314619	.	+	0	Parent=FBgn0086475.1.mrna1;Target=FBgn0086475.1 667 894 +
Chr1	stalkie_big_nohaplotig	CDS	34314687	34315136	.	+	0	Parent=FBgn0086475.1.mrna1;Target=FBgn0086475.1 895 1344 +
Chr1	stalkie_big_nohaplotig	CDS	34316506	34316863	.	+	0	Parent=FBgn0086475.1.mrna1;Target=FBgn0086475.1 1345 1702 +
Chr1	stalkie_big_nohaplotig	CDS	34316920	34317049	.	+	2	Parent=FBgn0086475.1.mrna1;Target=FBgn0086475.1 1703 1832 +
Chr1	stalkie_big_nohaplotig	CDS	34317130	34317640	.	+	1	Parent=FBgn0086475.1.mrna1;Target=FBgn0086475.1 1833 2343 +
Chr1	stalkie_big_nohaplotig	CDS	34317742	34318086	.	+	0	Parent=FBgn0086475.1.mrna1;Target=FBgn0086475.1 2344 2688 +
Chr1	gffcl	locus	34377401	34380841	.	+	.	ID=RLOC_00007075;geneIDs=FBgn0035501.1.path1;transcripts=FBgn0035501.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34377401	34380841	.	+	.	ID=FBgn0035501.1.mrna1;geneID=FBgn0035501.1.path1;Name=FBgn0035501.1;Dir=sensecoverage=100.0;identity=99.4;matches=1426;mismatches=8;indels=0;unknowns=0;locus=RLOC_00007075
Chr1	stalkie_big_nohaplotig	exon	34377401	34377476	98	+	.	Parent=FBgn0035501.1.mrna1;Target=FBgn0035501.1 1 76 +
Chr1	stalkie_big_nohaplotig	exon	34377617	34377792	98	+	.	Parent=FBgn0035501.1.mrna1;Target=FBgn0035501.1 77 252 +
Chr1	stalkie_big_nohaplotig	exon	34377847	34378051	99	+	.	Parent=FBgn0035501.1.mrna1;Target=FBgn0035501.1 253 457 +
Chr1	stalkie_big_nohaplotig	exon	34378116	34378494	99	+	.	Parent=FBgn0035501.1.mrna1;Target=FBgn0035501.1 458 836 +
Chr1	stalkie_big_nohaplotig	exon	34379992	34380067	100	+	.	Parent=FBgn0035501.1.mrna1;Target=FBgn0035501.1 837 912 +
Chr1	stalkie_big_nohaplotig	exon	34380207	34380291	98	+	.	Parent=FBgn0035501.1.mrna1;Target=FBgn0035501.1 913 997 +
Chr1	stalkie_big_nohaplotig	exon	34380344	34380642	100	+	.	Parent=FBgn0035501.1.mrna1;Target=FBgn0035501.1 998 1296 +
Chr1	stalkie_big_nohaplotig	exon	34380704	34380841	99	+	.	Parent=FBgn0035501.1.mrna1;Target=FBgn0035501.1 1297 1434 +
Chr1	stalkie_big_nohaplotig	CDS	34377401	34377476	.	+	0	Parent=FBgn0035501.1.mrna1;Target=FBgn0035501.1 1 76 +
Chr1	stalkie_big_nohaplotig	CDS	34377617	34377792	.	+	2	Parent=FBgn0035501.1.mrna1;Target=FBgn0035501.1 77 252 +
Chr1	stalkie_big_nohaplotig	CDS	34377847	34378051	.	+	0	Parent=FBgn0035501.1.mrna1;Target=FBgn0035501.1 253 457 +
Chr1	stalkie_big_nohaplotig	CDS	34378116	34378494	.	+	2	Parent=FBgn0035501.1.mrna1;Target=FBgn0035501.1 458 836 +
Chr1	stalkie_big_nohaplotig	CDS	34379992	34380067	.	+	1	Parent=FBgn0035501.1.mrna1;Target=FBgn0035501.1 837 912 +
Chr1	stalkie_big_nohaplotig	CDS	34380207	34380291	.	+	0	Parent=FBgn0035501.1.mrna1;Target=FBgn0035501.1 913 997 +
Chr1	stalkie_big_nohaplotig	CDS	34380344	34380642	.	+	2	Parent=FBgn0035501.1.mrna1;Target=FBgn0035501.1 998 1296 +
Chr1	stalkie_big_nohaplotig	CDS	34380704	34380841	.	+	0	Parent=FBgn0035501.1.mrna1;Target=FBgn0035501.1 1297 1434 +
Chr1	gffcl	locus	34382194	34382399	.	+	.	ID=RLOC_00007076;geneIDs=comp162560_c0_seq1.path1;transcripts=comp162560_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34382194	34382399	.	+	.	ID=comp162560_c0_seq1.mrna1;geneID=comp162560_c0_seq1.path1;Name=comp162560_c0_seq1;Dir=indeterminatecoverage=7.8;identity=95.1;matches=196;mismatches=10;indels=0;unknowns=0;Target=comp162560_c0_seq1 206 1 .;locus=RLOC_00007076
Chr1	stalkie_big_nohaplotig	exon	34382194	34382399	95	+	.	Parent=comp162560_c0_seq1.mrna1
Chr1	gffcl	locus	34387845	34402811	.	-	.	ID=RLOC_00007077;geneIDs=FBgn0259986.1.path1;transcripts=FBgn0259986.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34387845	34402811	.	-	.	ID=FBgn0259986.1.mrna1;geneID=FBgn0259986.1.path1;Name=FBgn0259986.1;Dir=sensecoverage=100.0;identity=99.7;matches=1708;mismatches=4;indels=1;unknowns=0;locus=RLOC_00007077
Chr1	stalkie_big_nohaplotig	exon	34387845	34387861	100	-	.	Parent=FBgn0259986.1.mrna1;Target=FBgn0259986.1 1697 1713 +
Chr1	stalkie_big_nohaplotig	exon	34387926	34388002	100	-	.	Parent=FBgn0259986.1.mrna1;Target=FBgn0259986.1 1620 1696 +
Chr1	stalkie_big_nohaplotig	exon	34388074	34388165	100	-	.	Parent=FBgn0259986.1.mrna1;Target=FBgn0259986.1 1528 1619 +
Chr1	stalkie_big_nohaplotig	exon	34390088	34390917	99	-	.	Parent=FBgn0259986.1.mrna1;Target=FBgn0259986.1 698 1527 +
Chr1	stalkie_big_nohaplotig	exon	34390975	34391250	100	-	.	Parent=FBgn0259986.1.mrna1;Target=FBgn0259986.1 422 697 +
Chr1	stalkie_big_nohaplotig	exon	34402392	34402811	99	-	.	Parent=FBgn0259986.1.mrna1;Target=FBgn0259986.1 1 421 +
Chr1	stalkie_big_nohaplotig	CDS	34387845	34387861	.	-	2	Parent=FBgn0259986.1.mrna1;Target=FBgn0259986.1 1697 1713 +
Chr1	stalkie_big_nohaplotig	CDS	34387926	34388002	.	-	1	Parent=FBgn0259986.1.mrna1;Target=FBgn0259986.1 1620 1696 +
Chr1	stalkie_big_nohaplotig	CDS	34388074	34388165	.	-	0	Parent=FBgn0259986.1.mrna1;Target=FBgn0259986.1 1528 1619 +
Chr1	stalkie_big_nohaplotig	CDS	34390088	34390917	.	-	2	Parent=FBgn0259986.1.mrna1;Target=FBgn0259986.1 698 1527 +
Chr1	stalkie_big_nohaplotig	CDS	34390975	34391250	.	-	2	Parent=FBgn0259986.1.mrna1;Target=FBgn0259986.1 422 697 +
Chr1	stalkie_big_nohaplotig	CDS	34402392	34402773	.	-	0	Parent=FBgn0259986.1.mrna1;Target=FBgn0259986.1 40 421 +
Chr1	gffcl	locus	34448322	34478378	.	+	.	ID=RLOC_00007079;geneIDs=FBgn0261985.1.path1,comp148305_c0_seq1.path1,comp162119_c0_seq1.path1;transcripts=comp162119_c0_seq1.mrna1,FBgn0261985.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34448322	34477792	.	+	.	ID=comp162119_c0_seq1.mrna1;geneID=comp162119_c0_seq1.path1;Name=comp162119_c0_seq1;Dir=sensecoverage=100.0;identity=99.1;matches=4562;mismatches=18;indels=25;unknowns=0;locus=RLOC_00007079
Chr1	stalkie_big_nohaplotig	exon	34448322	34449516	97	+	.	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 1 1202 +
Chr1	stalkie_big_nohaplotig	exon	34468086	34468448	100	+	.	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 1203 1565 +
Chr1	stalkie_big_nohaplotig	exon	34471119	34471226	100	+	.	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 1566 1673 +
Chr1	stalkie_big_nohaplotig	exon	34471292	34471384	97	+	.	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 1674 1766 +
Chr1	stalkie_big_nohaplotig	exon	34471447	34471588	100	+	.	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 1767 1908 +
Chr1	stalkie_big_nohaplotig	exon	34471661	34471869	99	+	.	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 1909 2117 +
Chr1	stalkie_big_nohaplotig	exon	34473094	34473246	100	+	.	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 2118 2270 +
Chr1	stalkie_big_nohaplotig	exon	34473320	34473471	100	+	.	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 2271 2422 +
Chr1	stalkie_big_nohaplotig	exon	34473530	34473889	100	+	.	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 2423 2782 +
Chr1	stalkie_big_nohaplotig	exon	34474003	34474700	99	+	.	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 2783 3480 +
Chr1	stalkie_big_nohaplotig	exon	34474761	34475385	99	+	.	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 3481 4105 +
Chr1	stalkie_big_nohaplotig	exon	34475447	34475624	100	+	.	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 4106 4283 +
Chr1	stalkie_big_nohaplotig	exon	34477480	34477792	99	+	.	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 4284 4596 +
Chr1	stalkie_big_nohaplotig	CDS	34468308	34468448	.	+	0	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 1425 1565 +
Chr1	stalkie_big_nohaplotig	CDS	34471119	34471226	.	+	0	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 1566 1673 +
Chr1	stalkie_big_nohaplotig	CDS	34471292	34471384	.	+	0	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 1674 1766 +
Chr1	stalkie_big_nohaplotig	CDS	34471447	34471588	.	+	0	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 1767 1908 +
Chr1	stalkie_big_nohaplotig	CDS	34471661	34471869	.	+	2	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 1909 2117 +
Chr1	stalkie_big_nohaplotig	CDS	34473094	34473246	.	+	0	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 2118 2270 +
Chr1	stalkie_big_nohaplotig	CDS	34473320	34473471	.	+	0	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 2271 2422 +
Chr1	stalkie_big_nohaplotig	CDS	34473530	34473889	.	+	1	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 2423 2782 +
Chr1	stalkie_big_nohaplotig	CDS	34474003	34474700	.	+	1	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 2783 3480 +
Chr1	stalkie_big_nohaplotig	CDS	34474761	34475385	.	+	2	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 3481 4105 +
Chr1	stalkie_big_nohaplotig	CDS	34475447	34475624	.	+	1	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 4106 4283 +
Chr1	stalkie_big_nohaplotig	CDS	34477480	34477575	.	+	0	Parent=comp162119_c0_seq1.mrna1;Target=comp162119_c0_seq1 4284 4379 +
Chr1	stalkie_big_nohaplotig	mRNA	34468275	34477572	.	+	.	ID=FBgn0261985.1.mrna1;geneID=FBgn0261985.1.path1;Name=FBgn0261985.1;Dir=sensecoverage=100.0;identity=99.6;matches=2945;mismatches=13;indels=0;unknowns=0;locus=RLOC_00007079
Chr1	stalkie_big_nohaplotig	exon	34468275	34468448	100	+	.	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 1 174 +
Chr1	stalkie_big_nohaplotig	exon	34471119	34471226	100	+	.	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 175 282 +
Chr1	stalkie_big_nohaplotig	exon	34471292	34471384	97	+	.	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 283 375 +
Chr1	stalkie_big_nohaplotig	exon	34471447	34471588	100	+	.	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 376 517 +
Chr1	stalkie_big_nohaplotig	exon	34471661	34471869	99	+	.	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 518 726 +
Chr1	stalkie_big_nohaplotig	exon	34473094	34473246	100	+	.	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 727 879 +
Chr1	stalkie_big_nohaplotig	exon	34473320	34473471	100	+	.	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 880 1031 +
Chr1	stalkie_big_nohaplotig	exon	34473557	34473889	100	+	.	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 1032 1364 +
Chr1	stalkie_big_nohaplotig	exon	34474003	34474700	99	+	.	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 1365 2062 +
Chr1	stalkie_big_nohaplotig	exon	34474761	34475385	99	+	.	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 2063 2687 +
Chr1	stalkie_big_nohaplotig	exon	34475447	34475624	100	+	.	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 2688 2865 +
Chr1	stalkie_big_nohaplotig	exon	34477480	34477572	98	+	.	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 2866 2958 +
Chr1	stalkie_big_nohaplotig	CDS	34468275	34468448	.	+	0	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 1 174 +
Chr1	stalkie_big_nohaplotig	CDS	34471119	34471226	.	+	0	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 175 282 +
Chr1	stalkie_big_nohaplotig	CDS	34471292	34471384	.	+	0	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 283 375 +
Chr1	stalkie_big_nohaplotig	CDS	34471447	34471588	.	+	0	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 376 517 +
Chr1	stalkie_big_nohaplotig	CDS	34471661	34471869	.	+	2	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 518 726 +
Chr1	stalkie_big_nohaplotig	CDS	34473094	34473246	.	+	0	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 727 879 +
Chr1	stalkie_big_nohaplotig	CDS	34473320	34473471	.	+	0	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 880 1031 +
Chr1	stalkie_big_nohaplotig	CDS	34473557	34473889	.	+	1	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 1032 1364 +
Chr1	stalkie_big_nohaplotig	CDS	34474003	34474700	.	+	1	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 1365 2062 +
Chr1	stalkie_big_nohaplotig	CDS	34474761	34475385	.	+	2	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 2063 2687 +
Chr1	stalkie_big_nohaplotig	CDS	34475447	34475624	.	+	1	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 2688 2865 +
Chr1	stalkie_big_nohaplotig	CDS	34477480	34477572	.	+	0	Parent=FBgn0261985.1.mrna1;Target=FBgn0261985.1 2866 2958 +
Chr1	gffcl	locus	34469165	34469638	.	-	.	ID=RLOC_00007080;geneIDs=comp145974_c0_seq1.path1;transcripts=comp145974_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34469165	34469638	.	-	.	ID=comp145974_c0_seq1.mrna1;geneID=comp145974_c0_seq1.path1;Name=comp145974_c0_seq1;Dir=indeterminatecoverage=52.1;identity=97.5;matches=462;mismatches=12;indels=0;unknowns=0;Target=comp145974_c0_seq1 520 47 .;CDS_Target=comp145974_c0_seq1 453 268 .;locus=RLOC_00007080
Chr1	stalkie_big_nohaplotig	exon	34469165	34469638	97	-	.	Parent=comp145974_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	34469232	34469417	.	-	0	Parent=comp145974_c0_seq1.mrna1
Chr1	gffcl	locus	34480299	34482854	.	-	.	ID=RLOC_00007081;geneIDs=FBgn0035136.1.path1;transcripts=FBgn0035136.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34480299	34482854	.	-	.	ID=FBgn0035136.1.mrna1;geneID=FBgn0035136.1.path1;Name=FBgn0035136.1;Dir=sensecoverage=100.0;identity=98.9;matches=2178;mismatches=23;indels=1;unknowns=0;locus=RLOC_00007081
Chr1	stalkie_big_nohaplotig	exon	34480299	34481270	98	-	.	Parent=FBgn0035136.1.mrna1;Target=FBgn0035136.1 1230 2202 +
Chr1	stalkie_big_nohaplotig	exon	34481329	34482106	98	-	.	Parent=FBgn0035136.1.mrna1;Target=FBgn0035136.1 452 1229 +
Chr1	stalkie_big_nohaplotig	exon	34482167	34482297	98	-	.	Parent=FBgn0035136.1.mrna1;Target=FBgn0035136.1 321 451 +
Chr1	stalkie_big_nohaplotig	exon	34482476	34482741	100	-	.	Parent=FBgn0035136.1.mrna1;Target=FBgn0035136.1 55 320 +
Chr1	stalkie_big_nohaplotig	exon	34482801	34482854	98	-	.	Parent=FBgn0035136.1.mrna1;Target=FBgn0035136.1 1 54 +
Chr1	stalkie_big_nohaplotig	CDS	34480299	34481270	.	-	1	Parent=FBgn0035136.1.mrna1;Target=FBgn0035136.1 1230 2202 +
Chr1	stalkie_big_nohaplotig	CDS	34481329	34482106	.	-	2	Parent=FBgn0035136.1.mrna1;Target=FBgn0035136.1 452 1229 +
Chr1	stalkie_big_nohaplotig	CDS	34482167	34482297	.	-	1	Parent=FBgn0035136.1.mrna1;Target=FBgn0035136.1 321 451 +
Chr1	stalkie_big_nohaplotig	CDS	34482476	34482741	.	-	0	Parent=FBgn0035136.1.mrna1;Target=FBgn0035136.1 55 320 +
Chr1	stalkie_big_nohaplotig	CDS	34482801	34482854	.	-	0	Parent=FBgn0035136.1.mrna1;Target=FBgn0035136.1 1 54 +
Chr1	gffcl	locus	34487769	34489299	.	-	.	ID=RLOC_00007082;geneIDs=FBgn0035132.3.path1;transcripts=FBgn0035132.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34487769	34489299	.	-	.	ID=FBgn0035132.3.mrna1;geneID=FBgn0035132.3.path1;Name=FBgn0035132.3;Dir=sensecoverage=79.3;identity=99.6;matches=1215;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007082
Chr1	stalkie_big_nohaplotig	exon	34487769	34487940	100	-	.	Parent=FBgn0035132.3.mrna1;Target=FBgn0035132.3 1052 1223 +
Chr1	stalkie_big_nohaplotig	exon	34488003	34488254	100	-	.	Parent=FBgn0035132.3.mrna1;Target=FBgn0035132.3 800 1051 +
Chr1	stalkie_big_nohaplotig	exon	34488352	34488537	100	-	.	Parent=FBgn0035132.3.mrna1;Target=FBgn0035132.3 614 799 +
Chr1	stalkie_big_nohaplotig	exon	34488633	34488786	99	-	.	Parent=FBgn0035132.3.mrna1;Target=FBgn0035132.3 460 613 +
Chr1	stalkie_big_nohaplotig	exon	34488844	34489299	99	-	.	Parent=FBgn0035132.3.mrna1;Target=FBgn0035132.3 4 459 +
Chr1	stalkie_big_nohaplotig	CDS	34487771	34487940	.	-	2	Parent=FBgn0035132.3.mrna1;Target=FBgn0035132.3 1052 1221 +
Chr1	stalkie_big_nohaplotig	CDS	34488003	34488254	.	-	2	Parent=FBgn0035132.3.mrna1;Target=FBgn0035132.3 800 1051 +
Chr1	stalkie_big_nohaplotig	CDS	34488352	34488537	.	-	2	Parent=FBgn0035132.3.mrna1;Target=FBgn0035132.3 614 799 +
Chr1	stalkie_big_nohaplotig	CDS	34488633	34488786	.	-	0	Parent=FBgn0035132.3.mrna1;Target=FBgn0035132.3 460 613 +
Chr1	stalkie_big_nohaplotig	CDS	34488844	34489299	.	-	0	Parent=FBgn0035132.3.mrna1;Target=FBgn0035132.3 4 459 +
Chr1	gffcl	locus	34514928	34515700	.	+	.	ID=RLOC_00007083;geneIDs=FBgn0035537.1.path1;transcripts=FBgn0035537.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34514928	34515700	.	+	.	ID=FBgn0035537.1.mrna1;geneID=FBgn0035537.1.path1;Name=FBgn0035537.1;Dir=sensecoverage=100.0;identity=99.6;matches=705;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007083
Chr1	stalkie_big_nohaplotig	exon	34514928	34515327	99	+	.	Parent=FBgn0035537.1.mrna1;Target=FBgn0035537.1 1 400 +
Chr1	stalkie_big_nohaplotig	exon	34515393	34515700	100	+	.	Parent=FBgn0035537.1.mrna1;Target=FBgn0035537.1 401 708 +
Chr1	stalkie_big_nohaplotig	CDS	34514928	34515327	.	+	0	Parent=FBgn0035537.1.mrna1;Target=FBgn0035537.1 1 400 +
Chr1	stalkie_big_nohaplotig	CDS	34515393	34515700	.	+	2	Parent=FBgn0035537.1.mrna1;Target=FBgn0035537.1 401 708 +
Chr1	gffcl	locus	34519388	34524458	.	-	.	ID=RLOC_00007085;geneIDs=FBgn0041630.2.path1;transcripts=FBgn0041630.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34519388	34524458	.	-	.	ID=FBgn0041630.2.mrna1;geneID=FBgn0041630.2.path1;Name=FBgn0041630.2;Dir=sensecoverage=100.0;identity=99.9;matches=1841;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007085
Chr1	stalkie_big_nohaplotig	exon	34519388	34520493	100	-	.	Parent=FBgn0041630.2.mrna1;Target=FBgn0041630.2 737 1842 +
Chr1	stalkie_big_nohaplotig	exon	34520557	34521197	99	-	.	Parent=FBgn0041630.2.mrna1;Target=FBgn0041630.2 96 736 +
Chr1	stalkie_big_nohaplotig	exon	34524364	34524458	100	-	.	Parent=FBgn0041630.2.mrna1;Target=FBgn0041630.2 1 95 +
Chr1	stalkie_big_nohaplotig	CDS	34519388	34520493	.	-	2	Parent=FBgn0041630.2.mrna1;Target=FBgn0041630.2 737 1842 +
Chr1	stalkie_big_nohaplotig	CDS	34520557	34521197	.	-	1	Parent=FBgn0041630.2.mrna1;Target=FBgn0041630.2 96 736 +
Chr1	stalkie_big_nohaplotig	CDS	34524364	34524458	.	-	0	Parent=FBgn0041630.2.mrna1;Target=FBgn0041630.2 1 95 +
Chr1	gffcl	locus	34525475	34525882	.	+	.	ID=RLOC_00007086;geneIDs=comp117485_c0_seq1.path1;transcripts=comp117485_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34525475	34525882	.	+	.	ID=comp117485_c0_seq1.mrna1;geneID=comp117485_c0_seq1.path1;Name=comp117485_c0_seq1;Dir=indeterminatecoverage=95.8;identity=99.8;matches=407;mismatches=1;indels=0;unknowns=0;Target=comp117485_c0_seq1 408 1 .;CDS_Target=comp117485_c0_seq1 350 195 .;locus=RLOC_00007086
Chr1	stalkie_big_nohaplotig	exon	34525475	34525882	99	+	.	Parent=comp117485_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	34525669	34525824	.	+	0	Parent=comp117485_c0_seq1.mrna1
Chr1	gffcl	locus	34525942	34527885	.	-	.	ID=RLOC_00007087;geneIDs=comp154079_c0_seq1.path1;transcripts=comp154079_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34525942	34527885	.	-	.	ID=comp154079_c0_seq1.mrna1;geneID=comp154079_c0_seq1.path1;Name=comp154079_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=858;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007087
Chr1	stalkie_big_nohaplotig	exon	34525942	34526203	100	-	.	Parent=comp154079_c0_seq1.mrna1;Target=comp154079_c0_seq1 1 262 -
Chr1	stalkie_big_nohaplotig	exon	34526473	34526748	100	-	.	Parent=comp154079_c0_seq1.mrna1;Target=comp154079_c0_seq1 263 538 -
Chr1	stalkie_big_nohaplotig	exon	34526832	34527009	100	-	.	Parent=comp154079_c0_seq1.mrna1;Target=comp154079_c0_seq1 539 716 -
Chr1	stalkie_big_nohaplotig	exon	34527743	34527885	99	-	.	Parent=comp154079_c0_seq1.mrna1;Target=comp154079_c0_seq1 717 859 -
Chr1	stalkie_big_nohaplotig	CDS	34526689	34526748	.	-	0	Parent=comp154079_c0_seq1.mrna1;Target=comp154079_c0_seq1 479 538 .
Chr1	stalkie_big_nohaplotig	CDS	34526832	34526882	.	-	0	Parent=comp154079_c0_seq1.mrna1;Target=comp154079_c0_seq1 539 589 .
Chr1	gffcl	locus	34529495	34531747	.	+	.	ID=RLOC_00007088;geneIDs=FBgn0035526.1.path1;transcripts=FBgn0035526.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34529495	34531747	.	+	.	ID=FBgn0035526.1.mrna1;geneID=FBgn0035526.1.path1;Name=FBgn0035526.1;Dir=sensecoverage=99.9;identity=98.9;matches=1322;mismatches=15;indels=0;unknowns=0;locus=RLOC_00007088
Chr1	stalkie_big_nohaplotig	exon	34529495	34529855	99	+	.	Parent=FBgn0035526.1.mrna1;Target=FBgn0035526.1 2 362 +
Chr1	stalkie_big_nohaplotig	exon	34529917	34530111	99	+	.	Parent=FBgn0035526.1.mrna1;Target=FBgn0035526.1 363 557 +
Chr1	stalkie_big_nohaplotig	exon	34530209	34530486	99	+	.	Parent=FBgn0035526.1.mrna1;Target=FBgn0035526.1 558 835 +
Chr1	stalkie_big_nohaplotig	exon	34530998	34531061	95	+	.	Parent=FBgn0035526.1.mrna1;Target=FBgn0035526.1 836 899 +
Chr1	stalkie_big_nohaplotig	exon	34531112	34531209	95	+	.	Parent=FBgn0035526.1.mrna1;Target=FBgn0035526.1 900 997 +
Chr1	stalkie_big_nohaplotig	exon	34531269	34531375	100	+	.	Parent=FBgn0035526.1.mrna1;Target=FBgn0035526.1 998 1104 +
Chr1	stalkie_big_nohaplotig	exon	34531443	34531613	98	+	.	Parent=FBgn0035526.1.mrna1;Target=FBgn0035526.1 1105 1275 +
Chr1	stalkie_big_nohaplotig	exon	34531685	34531747	98	+	.	Parent=FBgn0035526.1.mrna1;Target=FBgn0035526.1 1276 1338 +
Chr1	stalkie_big_nohaplotig	CDS	34529497	34529855	.	+	0	Parent=FBgn0035526.1.mrna1;Target=FBgn0035526.1 4 362 +
Chr1	stalkie_big_nohaplotig	CDS	34529917	34530111	.	+	1	Parent=FBgn0035526.1.mrna1;Target=FBgn0035526.1 363 557 +
Chr1	stalkie_big_nohaplotig	CDS	34530209	34530486	.	+	1	Parent=FBgn0035526.1.mrna1;Target=FBgn0035526.1 558 835 +
Chr1	stalkie_big_nohaplotig	CDS	34530998	34531061	.	+	2	Parent=FBgn0035526.1.mrna1;Target=FBgn0035526.1 836 899 +
Chr1	stalkie_big_nohaplotig	CDS	34531112	34531209	.	+	1	Parent=FBgn0035526.1.mrna1;Target=FBgn0035526.1 900 997 +
Chr1	stalkie_big_nohaplotig	CDS	34531269	34531375	.	+	2	Parent=FBgn0035526.1.mrna1;Target=FBgn0035526.1 998 1104 +
Chr1	stalkie_big_nohaplotig	CDS	34531443	34531613	.	+	0	Parent=FBgn0035526.1.mrna1;Target=FBgn0035526.1 1105 1275 +
Chr1	stalkie_big_nohaplotig	CDS	34531685	34531747	.	+	0	Parent=FBgn0035526.1.mrna1;Target=FBgn0035526.1 1276 1338 +
Chr1	gffcl	locus	34537550	34537913	.	+	.	ID=RLOC_00007089;geneIDs=comp150018_c0_seq1.path1;transcripts=comp150018_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34537550	34537913	.	+	.	ID=comp150018_c0_seq1.mrna1;geneID=comp150018_c0_seq1.path1;Name=comp150018_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.2;matches=340;mismatches=11;indels=14;unknowns=0;Target=comp150018_c0_seq1 352 1 .;CDS_Target=comp150018_c0_seq1 140 3 .;locus=RLOC_00007089
Chr1	stalkie_big_nohaplotig	exon	34537550	34537913	93	+	.	Parent=comp150018_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	34537552	34537689	.	+	0	Parent=comp150018_c0_seq1.mrna1
Chr1	gffcl	locus	34543891	34544853	.	+	.	ID=RLOC_00007090;geneIDs=comp142480_c0_seq1.path1;transcripts=comp142480_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34543891	34544853	.	+	.	ID=comp142480_c0_seq1.mrna1;geneID=comp142480_c0_seq1.path1;Name=comp142480_c0_seq1;Dir=antisensecoverage=99.1;identity=99.4;matches=770;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007090
Chr1	stalkie_big_nohaplotig	exon	34543891	34543958	100	+	.	Parent=comp142480_c0_seq1.mrna1;Target=comp142480_c0_seq1 708 775 -
Chr1	stalkie_big_nohaplotig	exon	34544147	34544853	99	+	.	Parent=comp142480_c0_seq1.mrna1;Target=comp142480_c0_seq1 1 707 -
Chr1	stalkie_big_nohaplotig	CDS	34543892	34543958	.	+	0	Parent=comp142480_c0_seq1.mrna1;Target=comp142480_c0_seq1 708 774 .
Chr1	stalkie_big_nohaplotig	CDS	34544147	34544205	.	+	2	Parent=comp142480_c0_seq1.mrna1;Target=comp142480_c0_seq1 649 707 .
Chr1	gffcl	locus	34547462	34551101	.	+	.	ID=RLOC_00007091;geneIDs=FBgn0035526.2.path1,comp118114_c1_seq1.path1;transcripts=FBgn0035526.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34547462	34550813	.	+	.	ID=FBgn0035526.2.mrna1;geneID=FBgn0035526.2.path1;Name=FBgn0035526.2;Dir=sensecoverage=100.0;identity=99.6;matches=1437;mismatches=6;indels=0;unknowns=0;locus=RLOC_00007091
Chr1	stalkie_big_nohaplotig	exon	34547462	34547835	99	+	.	Parent=FBgn0035526.2.mrna1;Target=FBgn0035526.2 1 374 +
Chr1	stalkie_big_nohaplotig	exon	34547919	34548113	100	+	.	Parent=FBgn0035526.2.mrna1;Target=FBgn0035526.2 375 569 +
Chr1	stalkie_big_nohaplotig	exon	34548179	34548549	99	+	.	Parent=FBgn0035526.2.mrna1;Target=FBgn0035526.2 570 940 +
Chr1	stalkie_big_nohaplotig	exon	34550072	34550135	96	+	.	Parent=FBgn0035526.2.mrna1;Target=FBgn0035526.2 941 1004 +
Chr1	stalkie_big_nohaplotig	exon	34550188	34550285	100	+	.	Parent=FBgn0035526.2.mrna1;Target=FBgn0035526.2 1005 1102 +
Chr1	stalkie_big_nohaplotig	exon	34550345	34550451	100	+	.	Parent=FBgn0035526.2.mrna1;Target=FBgn0035526.2 1103 1209 +
Chr1	stalkie_big_nohaplotig	exon	34550512	34550682	100	+	.	Parent=FBgn0035526.2.mrna1;Target=FBgn0035526.2 1210 1380 +
Chr1	stalkie_big_nohaplotig	exon	34550751	34550813	100	+	.	Parent=FBgn0035526.2.mrna1;Target=FBgn0035526.2 1381 1443 +
Chr1	stalkie_big_nohaplotig	CDS	34547462	34547835	.	+	0	Parent=FBgn0035526.2.mrna1;Target=FBgn0035526.2 1 374 +
Chr1	stalkie_big_nohaplotig	CDS	34547919	34548113	.	+	1	Parent=FBgn0035526.2.mrna1;Target=FBgn0035526.2 375 569 +
Chr1	stalkie_big_nohaplotig	CDS	34548179	34548549	.	+	1	Parent=FBgn0035526.2.mrna1;Target=FBgn0035526.2 570 940 +
Chr1	stalkie_big_nohaplotig	CDS	34550072	34550135	.	+	2	Parent=FBgn0035526.2.mrna1;Target=FBgn0035526.2 941 1004 +
Chr1	stalkie_big_nohaplotig	CDS	34550188	34550285	.	+	1	Parent=FBgn0035526.2.mrna1;Target=FBgn0035526.2 1005 1102 +
Chr1	stalkie_big_nohaplotig	CDS	34550345	34550451	.	+	2	Parent=FBgn0035526.2.mrna1;Target=FBgn0035526.2 1103 1209 +
Chr1	stalkie_big_nohaplotig	CDS	34550512	34550682	.	+	0	Parent=FBgn0035526.2.mrna1;Target=FBgn0035526.2 1210 1380 +
Chr1	stalkie_big_nohaplotig	CDS	34550751	34550813	.	+	0	Parent=FBgn0035526.2.mrna1;Target=FBgn0035526.2 1381 1443 +
Chr1	gffcl	locus	34555429	34556330	.	+	.	ID=RLOC_00007092;geneIDs=FBgn0035206.1.path1;transcripts=FBgn0035206.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34555429	34556330	.	+	.	ID=FBgn0035206.1.mrna1;geneID=FBgn0035206.1.path1;Name=FBgn0035206.1;Dir=sensecoverage=99.8;identity=99.1;matches=839;mismatches=8;indels=0;unknowns=0;locus=RLOC_00007092
Chr1	stalkie_big_nohaplotig	exon	34555429	34555630	99	+	.	Parent=FBgn0035206.1.mrna1;Target=FBgn0035206.1 1 202 +
Chr1	stalkie_big_nohaplotig	exon	34555686	34556330	99	+	.	Parent=FBgn0035206.1.mrna1;Target=FBgn0035206.1 203 847 +
Chr1	stalkie_big_nohaplotig	CDS	34555429	34555630	.	+	0	Parent=FBgn0035206.1.mrna1;Target=FBgn0035206.1 1 202 +
Chr1	stalkie_big_nohaplotig	CDS	34555686	34556329	.	+	2	Parent=FBgn0035206.1.mrna1;Target=FBgn0035206.1 203 846 +
Chr1	gffcl	locus	34557028	34560800	.	-	.	ID=RLOC_00007093;geneIDs=FBgn0035205.1.path1;transcripts=FBgn0035205.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34557028	34560800	.	-	.	ID=FBgn0035205.1.mrna1;geneID=FBgn0035205.1.path1;Name=FBgn0035205.1;Dir=sensecoverage=100.0;identity=99.9;matches=3595;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007093
Chr1	stalkie_big_nohaplotig	exon	34557028	34558861	99	-	.	Parent=FBgn0035205.1.mrna1;Target=FBgn0035205.1 1767 3600 +
Chr1	stalkie_big_nohaplotig	exon	34558916	34560474	100	-	.	Parent=FBgn0035205.1.mrna1;Target=FBgn0035205.1 208 1766 +
Chr1	stalkie_big_nohaplotig	exon	34560536	34560634	100	-	.	Parent=FBgn0035205.1.mrna1;Target=FBgn0035205.1 109 207 +
Chr1	stalkie_big_nohaplotig	exon	34560693	34560800	100	-	.	Parent=FBgn0035205.1.mrna1;Target=FBgn0035205.1 1 108 +
Chr1	stalkie_big_nohaplotig	CDS	34557028	34558861	.	-	1	Parent=FBgn0035205.1.mrna1;Target=FBgn0035205.1 1767 3600 +
Chr1	stalkie_big_nohaplotig	CDS	34558916	34560474	.	-	0	Parent=FBgn0035205.1.mrna1;Target=FBgn0035205.1 208 1766 +
Chr1	stalkie_big_nohaplotig	CDS	34560536	34560634	.	-	0	Parent=FBgn0035205.1.mrna1;Target=FBgn0035205.1 109 207 +
Chr1	stalkie_big_nohaplotig	CDS	34560693	34560800	.	-	0	Parent=FBgn0035205.1.mrna1;Target=FBgn0035205.1 1 108 +
Chr1	gffcl	locus	34562407	34565423	.	+	.	ID=RLOC_00007094;geneIDs=FBgn0011802.1.path1;transcripts=FBgn0011802.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34562407	34565423	.	+	.	ID=FBgn0011802.1.mrna1;geneID=FBgn0011802.1.path1;Name=FBgn0011802.1;Dir=sensecoverage=100.0;identity=99.5;matches=2713;mismatches=14;indels=0;unknowns=0;locus=RLOC_00007094
Chr1	stalkie_big_nohaplotig	exon	34562407	34562764	98	+	.	Parent=FBgn0011802.1.mrna1;Target=FBgn0011802.1 1 358 +
Chr1	stalkie_big_nohaplotig	exon	34562830	34564970	99	+	.	Parent=FBgn0011802.1.mrna1;Target=FBgn0011802.1 359 2499 +
Chr1	stalkie_big_nohaplotig	exon	34565196	34565423	99	+	.	Parent=FBgn0011802.1.mrna1;Target=FBgn0011802.1 2500 2727 +
Chr1	stalkie_big_nohaplotig	CDS	34562407	34562764	.	+	0	Parent=FBgn0011802.1.mrna1;Target=FBgn0011802.1 1 358 +
Chr1	stalkie_big_nohaplotig	CDS	34562830	34564970	.	+	2	Parent=FBgn0011802.1.mrna1;Target=FBgn0011802.1 359 2499 +
Chr1	stalkie_big_nohaplotig	CDS	34565196	34565423	.	+	0	Parent=FBgn0011802.1.mrna1;Target=FBgn0011802.1 2500 2727 +
Chr1	gffcl	locus	34601513	34602069	.	-	.	ID=RLOC_00007095;geneIDs=comp138335_c0_seq1.path1;transcripts=comp138335_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34601513	34602069	.	-	.	ID=comp138335_c0_seq1.mrna1;geneID=comp138335_c0_seq1.path1;Name=comp138335_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.6;matches=549;mismatches=8;indels=0;unknowns=0;Target=comp138335_c0_seq1 557 1 .;CDS_Target=comp138335_c0_seq1 555 427 .;locus=RLOC_00007095
Chr1	stalkie_big_nohaplotig	exon	34601513	34602069	98	-	.	Parent=comp138335_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	34601515	34601643	.	-	0	Parent=comp138335_c0_seq1.mrna1
Chr1	gffcl	locus	34606460	34607947	.	-	.	ID=RLOC_00007096;geneIDs=FBgn0003889.4.path1,FBgn0003889.5.path2;transcripts=FBgn0003889.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34606460	34607947	.	-	.	ID=FBgn0003889.4.mrna1;geneID=FBgn0003889.4.path1;Name=FBgn0003889.4;Dir=sensecoverage=100.0;identity=99.8;matches=1290;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007096
Chr1	stalkie_big_nohaplotig	exon	34606460	34607284	99	-	.	Parent=FBgn0003889.4.mrna1;Target=FBgn0003889.4 469 1293 +
Chr1	stalkie_big_nohaplotig	exon	34607480	34607947	99	-	.	Parent=FBgn0003889.4.mrna1;Target=FBgn0003889.4 1 468 +
Chr1	stalkie_big_nohaplotig	CDS	34606460	34607284	.	-	0	Parent=FBgn0003889.4.mrna1;Target=FBgn0003889.4 469 1293 +
Chr1	stalkie_big_nohaplotig	CDS	34607480	34607947	.	-	0	Parent=FBgn0003889.4.mrna1;Target=FBgn0003889.4 1 468 +
Chr1	gffcl	locus	34717989	34718869	.	+	.	ID=RLOC_00007097;geneIDs=comp149251_c1_seq1.path1;transcripts=comp149251_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34717989	34718869	.	+	.	ID=comp149251_c1_seq1.mrna1;geneID=comp149251_c1_seq1.path1;Name=comp149251_c1_seq1;Dir=indeterminatecoverage=99.9;identity=98.6;matches=869;mismatches=12;indels=0;unknowns=0;Target=comp149251_c1_seq1 881 1 .;CDS_Target=comp149251_c1_seq1 254 105 .;locus=RLOC_00007097
Chr1	stalkie_big_nohaplotig	exon	34717989	34718869	98	+	.	Parent=comp149251_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	34718093	34718242	.	+	0	Parent=comp149251_c1_seq1.mrna1
Chr1	gffcl	locus	34848154	34849466	.	-	.	ID=RLOC_00007098;geneIDs=comp150924_c0_seq1.path1;transcripts=comp150924_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34848154	34849466	.	-	.	ID=comp150924_c0_seq1.mrna1;geneID=comp150924_c0_seq1.path1;Name=comp150924_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.1;matches=1306;mismatches=4;indels=8;unknowns=0;Target=comp150924_c0_seq1 1315 1 .;CDS_Target=comp150924_c0_seq1 1202 879 .;locus=RLOC_00007098
Chr1	stalkie_big_nohaplotig	exon	34848154	34849466	99	-	.	Parent=comp150924_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	34848267	34848593	.	-	0	Parent=comp150924_c0_seq1.mrna1
Chr1	gffcl	locus	34849763	34850382	.	+	.	ID=RLOC_00007099;geneIDs=comp152189_c1_seq1.path1;transcripts=comp152189_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	34849763	34850382	.	+	.	ID=comp152189_c1_seq1.mrna1;geneID=comp152189_c1_seq1.path1;Name=comp152189_c1_seq1;Dir=indeterminatecoverage=97.2;identity=98.1;matches=608;mismatches=6;indels=6;unknowns=0;Target=comp152189_c1_seq1 614 1 .;CDS_Target=comp152189_c1_seq1 614 303 .;locus=RLOC_00007099
Chr1	stalkie_big_nohaplotig	exon	34849763	34850382	98	+	.	Parent=comp152189_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	34850071	34850382	.	+	0	Parent=comp152189_c1_seq1.mrna1
Chr1	gffcl	locus	35042194	35042721	.	-	.	ID=RLOC_00007100;geneIDs=comp144579_c0_seq1.path1;transcripts=comp144579_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35042194	35042721	.	-	.	ID=comp144579_c0_seq1.mrna1;geneID=comp144579_c0_seq1.path1;Name=comp144579_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=527;mismatches=1;indels=0;unknowns=0;Target=comp144579_c0_seq1 529 2 .;CDS_Target=comp144579_c0_seq1 175 56 .;locus=RLOC_00007100
Chr1	stalkie_big_nohaplotig	exon	35042194	35042721	99	-	.	Parent=comp144579_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	35042548	35042667	.	-	0	Parent=comp144579_c0_seq1.mrna1
Chr1	gffcl	locus	35048449	35049367	.	-	.	ID=RLOC_00007101;geneIDs=comp153186_c0_seq1.path1;transcripts=comp153186_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35048449	35049367	.	-	.	ID=comp153186_c0_seq1.mrna1;geneID=comp153186_c0_seq1.path1;Name=comp153186_c0_seq1;Dir=sensecoverage=100.0;identity=97.6;matches=203;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007101
Chr1	stalkie_big_nohaplotig	exon	35048449	35048528	100	-	.	Parent=comp153186_c0_seq1.mrna1;Target=comp153186_c0_seq1 129 208 +
Chr1	stalkie_big_nohaplotig	exon	35049174	35049267	96	-	.	Parent=comp153186_c0_seq1.mrna1;Target=comp153186_c0_seq1 35 128 +
Chr1	stalkie_big_nohaplotig	exon	35049334	35049367	94	-	.	Parent=comp153186_c0_seq1.mrna1;Target=comp153186_c0_seq1 1 34 +
Chr1	stalkie_big_nohaplotig	CDS	35048492	35048528	.	-	1	Parent=comp153186_c0_seq1.mrna1;Target=comp153186_c0_seq1 129 165 +
Chr1	stalkie_big_nohaplotig	CDS	35049174	35049267	.	-	2	Parent=comp153186_c0_seq1.mrna1;Target=comp153186_c0_seq1 35 128 +
Chr1	stalkie_big_nohaplotig	CDS	35049334	35049367	.	-	0	Parent=comp153186_c0_seq1.mrna1;Target=comp153186_c0_seq1 1 34 +
Chr1	gffcl	locus	35050370	35050923	.	-	.	ID=RLOC_00007102;geneIDs=comp146595_c0_seq1.path2;transcripts=comp146595_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	35050370	35050923	.	-	.	ID=comp146595_c0_seq1.mrna2;geneID=comp146595_c0_seq1.path2;Name=comp146595_c0_seq1;Dir=indeterminatecoverage=97.4;identity=99.8;matches=553;mismatches=1;indels=0;unknowns=0;Target=comp146595_c0_seq1 555 2 .;CDS_Target=comp146595_c0_seq1 100 2 .;locus=RLOC_00007102
Chr1	stalkie_big_nohaplotig	exon	35050370	35050923	99	-	.	Parent=comp146595_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	35050825	35050923	.	-	0	Parent=comp146595_c0_seq1.mrna2
Chr1	gffcl	locus	35130489	35133179	.	+	.	ID=RLOC_00007103;geneIDs=comp158756_c0_seq1.path1;transcripts=comp158756_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35130489	35133179	.	+	.	ID=comp158756_c0_seq1.mrna1;geneID=comp158756_c0_seq1.path1;Name=comp158756_c0_seq1;Dir=sensecoverage=99.9;identity=91.4;matches=1620;mismatches=46;indels=107;unknowns=0;Target=comp158756_c0_seq1 554 967 +;locus=RLOC_00007103
Chr1	stalkie_big_nohaplotig	exon	35130489	35130824	99	+	.	Parent=comp158756_c0_seq1.mrna1;Target=comp158756_c0_seq1 1 335 +
Chr1	stalkie_big_nohaplotig	exon	35131702	35132332	97	+	.	Parent=comp158756_c0_seq1.mrna1;Target=comp158756_c0_seq1 336 972 +
Chr1	stalkie_big_nohaplotig	exon	35132408	35132549	91	+	.	Parent=comp158756_c0_seq1.mrna1;Target=comp158756_c0_seq1 973 1123 +
Chr1	stalkie_big_nohaplotig	exon	35132622	35133179	81	+	.	Parent=comp158756_c0_seq1.mrna1;Target=comp158756_c0_seq1 1124 1772 +
Chr1	stalkie_big_nohaplotig	CDS	35131920	35132327	.	+	0	Parent=comp158756_c0_seq1.mrna1
Chr1	gffcl	locus	35168695	35172563	.	-	.	ID=RLOC_00007104;geneIDs=comp158756_c0_seq1.path2,comp687845_c0_seq1.path1;transcripts=comp687845_c0_seq1.mrna1,comp158756_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	35168695	35169930	.	-	.	ID=comp687845_c0_seq1.mrna1;geneID=comp687845_c0_seq1.path1;Name=comp687845_c0_seq1;Dir=sensecoverage=100.0;identity=91.7;matches=431;mismatches=13;indels=26;unknowns=0;Target=comp687845_c0_seq1 33 77 +;locus=RLOC_00007104
Chr1	stalkie_big_nohaplotig	exon	35168695	35169116	91	-	.	Parent=comp687845_c0_seq1.mrna1;Target=comp687845_c0_seq1 24 469 +
Chr1	stalkie_big_nohaplotig	exon	35169908	35169930	100	-	.	Parent=comp687845_c0_seq1.mrna1;Target=comp687845_c0_seq1 1 23 +
Chr1	stalkie_big_nohaplotig	CDS	35169063	35169107	.	-	0	Parent=comp687845_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35169858	35172563	.	-	.	ID=comp158756_c0_seq1.mrna2;geneID=comp158756_c0_seq1.path2;Name=comp158756_c0_seq1;Dir=sensecoverage=99.9;identity=91.2;matches=1618;mismatches=46;indels=110;unknowns=0;Target=comp158756_c0_seq1 554 967 +;locus=RLOC_00007104
Chr1	stalkie_big_nohaplotig	exon	35169858	35170416	81	-	.	Parent=comp158756_c0_seq1.mrna2;Target=comp158756_c0_seq1 1124 1772 +
Chr1	stalkie_big_nohaplotig	exon	35170489	35170630	91	-	.	Parent=comp158756_c0_seq1.mrna2;Target=comp158756_c0_seq1 973 1123 +
Chr1	stalkie_big_nohaplotig	exon	35170706	35171336	97	-	.	Parent=comp158756_c0_seq1.mrna2;Target=comp158756_c0_seq1 336 972 +
Chr1	stalkie_big_nohaplotig	exon	35172230	35172563	98	-	.	Parent=comp158756_c0_seq1.mrna2;Target=comp158756_c0_seq1 1 335 +
Chr1	stalkie_big_nohaplotig	CDS	35170711	35171118	.	-	0	Parent=comp158756_c0_seq1.mrna2
Chr1	gffcl	locus	35178349	35178819	.	-	.	ID=RLOC_00007105;geneIDs=comp112432_c0_seq1.path1;transcripts=comp112432_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35178349	35178819	.	-	.	ID=comp112432_c0_seq1.mrna1;geneID=comp112432_c0_seq1.path1;Name=comp112432_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=458;mismatches=4;indels=9;unknowns=0;Target=comp112432_c0_seq1 462 1 .;CDS_Target=comp112432_c0_seq1 170 90 .;locus=RLOC_00007105
Chr1	stalkie_big_nohaplotig	exon	35178349	35178819	97	-	.	Parent=comp112432_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	35178650	35178730	.	-	0	Parent=comp112432_c0_seq1.mrna1
Chr1	gffcl	locus	35257056	35257862	.	-	.	ID=RLOC_00007106;geneIDs=comp100155_c0_seq1.path1;transcripts=comp100155_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35257056	35257862	.	-	.	ID=comp100155_c0_seq1.mrna1;geneID=comp100155_c0_seq1.path1;Name=comp100155_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.6;matches=796;mismatches=2;indels=9;unknowns=0;Target=comp100155_c0_seq1 799 2 .;CDS_Target=comp100155_c0_seq1 396 151 .;locus=RLOC_00007106
Chr1	stalkie_big_nohaplotig	exon	35257056	35257862	98	-	.	Parent=comp100155_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	35257468	35257713	.	-	0	Parent=comp100155_c0_seq1.mrna1
Chr1	gffcl	locus	35262442	35263063	.	+	.	ID=RLOC_00007107;geneIDs=comp143641_c0_seq1.path1;transcripts=comp143641_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35262442	35263063	.	+	.	ID=comp143641_c0_seq1.mrna1;geneID=comp143641_c0_seq1.path1;Name=comp143641_c0_seq1;Dir=indeterminatecoverage=83.7;identity=85.5;matches=538;mismatches=54;indels=37;unknowns=0;Target=comp143641_c0_seq1 599 1 .;CDS_Target=comp143641_c0_seq1 272 171 .;locus=RLOC_00007107
Chr1	stalkie_big_nohaplotig	exon	35262442	35263063	85	+	.	Parent=comp143641_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	35262612	35262713	.	+	0	Parent=comp143641_c0_seq1.mrna1
Chr1	gffcl	locus	35296478	35320922	.	-	.	ID=RLOC_00007108;geneIDs=FBgn0052271.1.path1,FBgn0052271.4.path1,comp107321_c0_seq1.path1;transcripts=comp107321_c0_seq1.mrna1,FBgn0052271.4.mrna1,FBgn0052271.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35296478	35320922	.	-	.	ID=comp107321_c0_seq1.mrna1;geneID=comp107321_c0_seq1.path1;Name=comp107321_c0_seq1;Dir=indeterminatecoverage=57.5;identity=98.5;matches=197;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007108
Chr1	stalkie_big_nohaplotig	exon	35296478	35296486	100	-	.	Parent=comp107321_c0_seq1.mrna1;Target=comp107321_c0_seq1 264 256 .
Chr1	stalkie_big_nohaplotig	exon	35300711	35300718	100	-	.	Parent=comp107321_c0_seq1.mrna1;Target=comp107321_c0_seq1 255 248 .
Chr1	stalkie_big_nohaplotig	exon	35307999	35308003	100	-	.	Parent=comp107321_c0_seq1.mrna1;Target=comp107321_c0_seq1 247 243 .
Chr1	stalkie_big_nohaplotig	exon	35313429	35313439	90	-	.	Parent=comp107321_c0_seq1.mrna1;Target=comp107321_c0_seq1 242 232 .
Chr1	stalkie_big_nohaplotig	exon	35320756	35320922	98	-	.	Parent=comp107321_c0_seq1.mrna1;Target=comp107321_c0_seq1 231 65 .
Chr1	stalkie_big_nohaplotig	CDS	35300712	35300718	.	-	1	Parent=comp107321_c0_seq1.mrna1;Target=comp107321_c0_seq1 254 248 .
Chr1	stalkie_big_nohaplotig	CDS	35307999	35308003	.	-	0	Parent=comp107321_c0_seq1.mrna1;Target=comp107321_c0_seq1 247 243 .
Chr1	stalkie_big_nohaplotig	CDS	35313429	35313439	.	-	2	Parent=comp107321_c0_seq1.mrna1;Target=comp107321_c0_seq1 242 232 .
Chr1	stalkie_big_nohaplotig	CDS	35320756	35320921	.	-	0	Parent=comp107321_c0_seq1.mrna1;Target=comp107321_c0_seq1 231 66 .
Chr1	stalkie_big_nohaplotig	mRNA	35312751	35313524	.	-	.	ID=FBgn0052271.4.mrna1;geneID=FBgn0052271.4.path1;Name=FBgn0052271.4;Dir=indeterminatecoverage=100.0;identity=99.7;matches=772;mismatches=2;indels=0;unknowns=0;Target=FBgn0052271.4 774 1 .;locus=RLOC_00007108
Chr1	stalkie_big_nohaplotig	exon	35312751	35313524	99	-	.	Parent=FBgn0052271.4.mrna1
Chr1	stalkie_big_nohaplotig	CDS	35312751	35313524	.	-	0	Parent=FBgn0052271.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35320154	35320777	.	-	.	ID=FBgn0052271.1.mrna1;geneID=FBgn0052271.1.path1;Name=FBgn0052271.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=624;mismatches=0;indels=0;unknowns=0;Target=FBgn0052271.1 624 1 .;locus=RLOC_00007108
Chr1	stalkie_big_nohaplotig	exon	35320154	35320777	100	-	.	Parent=FBgn0052271.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	35320154	35320777	.	-	0	Parent=FBgn0052271.1.mrna1
Chr1	gffcl	locus	35301777	35341555	.	+	.	ID=RLOC_00007109;geneIDs=FBgn0035416.1.path1;transcripts=FBgn0035416.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35301777	35341555	.	+	.	ID=FBgn0035416.1.mrna1;geneID=FBgn0035416.1.path1;Name=FBgn0035416.1;Dir=sensecoverage=100.0;identity=99.2;matches=2857;mismatches=22;indels=1;unknowns=0;Target=FBgn0035416.1 3 32 +;locus=RLOC_00007109
Chr1	stalkie_big_nohaplotig	exon	35301777	35301809	97	+	.	Parent=FBgn0035416.1.mrna1;Target=FBgn0035416.1 1 34 +
Chr1	stalkie_big_nohaplotig	exon	35301873	35302045	100	+	.	Parent=FBgn0035416.1.mrna1;Target=FBgn0035416.1 35 207 +
Chr1	stalkie_big_nohaplotig	exon	35302112	35302245	97	+	.	Parent=FBgn0035416.1.mrna1;Target=FBgn0035416.1 208 341 +
Chr1	stalkie_big_nohaplotig	exon	35302763	35302970	99	+	.	Parent=FBgn0035416.1.mrna1;Target=FBgn0035416.1 342 549 +
Chr1	stalkie_big_nohaplotig	exon	35303058	35303248	100	+	.	Parent=FBgn0035416.1.mrna1;Target=FBgn0035416.1 550 740 +
Chr1	stalkie_big_nohaplotig	exon	35304695	35305108	99	+	.	Parent=FBgn0035416.1.mrna1;Target=FBgn0035416.1 741 1154 +
Chr1	stalkie_big_nohaplotig	exon	35305183	35305334	99	+	.	Parent=FBgn0035416.1.mrna1;Target=FBgn0035416.1 1155 1306 +
Chr1	stalkie_big_nohaplotig	exon	35336729	35337243	99	+	.	Parent=FBgn0035416.1.mrna1;Target=FBgn0035416.1 1307 1821 +
Chr1	stalkie_big_nohaplotig	exon	35337974	35338813	98	+	.	Parent=FBgn0035416.1.mrna1;Target=FBgn0035416.1 1822 2661 +
Chr1	stalkie_big_nohaplotig	exon	35340942	35341136	99	+	.	Parent=FBgn0035416.1.mrna1;Target=FBgn0035416.1 2662 2856 +
Chr1	stalkie_big_nohaplotig	exon	35341532	35341555	100	+	.	Parent=FBgn0035416.1.mrna1;Target=FBgn0035416.1 2857 2880 +
Chr1	stalkie_big_nohaplotig	CDS	35301779	35301807	.	+	0	Parent=FBgn0035416.1.mrna1
Chr1	gffcl	locus	35305886	35306708	.	-	.	ID=RLOC_00007110;geneIDs=FBgn0052271.3.path2;transcripts=FBgn0052271.3.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	35305886	35306708	.	-	.	ID=FBgn0052271.3.mrna2;geneID=FBgn0052271.3.path2;Name=FBgn0052271.3;Dir=indeterminatecoverage=99.8;identity=99.3;matches=817;mismatches=6;indels=0;unknowns=0;Target=FBgn0052271.3 825 3 .;CDS_Target=FBgn0052271.3 825 49 .;locus=RLOC_00007110
Chr1	stalkie_big_nohaplotig	exon	35305886	35306708	99	-	.	Parent=FBgn0052271.3.mrna2
Chr1	stalkie_big_nohaplotig	CDS	35305886	35306662	.	-	0	Parent=FBgn0052271.3.mrna2
Chr1	gffcl	locus	35308649	35309645	.	-	.	ID=RLOC_00007111;geneIDs=FBgn0035070.3.path1;transcripts=FBgn0035070.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35308649	35309645	.	-	.	ID=FBgn0035070.3.mrna1;geneID=FBgn0035070.3.path1;Name=FBgn0035070.3;Dir=indeterminatecoverage=98.9;identity=99.6;matches=993;mismatches=4;indels=0;unknowns=0;Target=FBgn0035070.3 1008 12 .;CDS_Target=FBgn0035070.3 1008 13 .;locus=RLOC_00007111
Chr1	stalkie_big_nohaplotig	exon	35308649	35309645	99	-	.	Parent=FBgn0035070.3.mrna1
Chr1	stalkie_big_nohaplotig	CDS	35308649	35309644	.	-	0	Parent=FBgn0035070.3.mrna1
Chr1	gffcl	locus	35316302	35317111	.	-	.	ID=RLOC_00007112;geneIDs=FBgn0053159.1.path1;transcripts=FBgn0053159.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35316302	35317111	.	-	.	ID=FBgn0053159.1.mrna1;geneID=FBgn0053159.1.path1;Name=FBgn0053159.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=804;mismatches=6;indels=0;unknowns=0;Target=FBgn0053159.1 810 1 .;locus=RLOC_00007112
Chr1	stalkie_big_nohaplotig	exon	35316302	35317111	99	-	.	Parent=FBgn0053159.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	35316302	35317111	.	-	0	Parent=FBgn0053159.1.mrna1
Chr1	gffcl	locus	35326572	35327303	.	-	.	ID=RLOC_00007113;geneIDs=FBgn0039703.1.path1;transcripts=FBgn0039703.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35326572	35327303	.	-	.	ID=FBgn0039703.1.mrna1;geneID=FBgn0039703.1.path1;Name=FBgn0039703.1;Dir=indeterminatecoverage=99.2;identity=97.7;matches=715;mismatches=17;indels=0;unknowns=0;Target=FBgn0039703.1 738 7 .;locus=RLOC_00007113
Chr1	stalkie_big_nohaplotig	exon	35326572	35327303	97	-	.	Parent=FBgn0039703.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	35326572	35327303	.	-	0	Parent=FBgn0039703.1.mrna1
Chr1	gffcl	locus	35342214	35349366	.	-	.	ID=RLOC_00007114;geneIDs=FBgn0035420.1.path2;transcripts=FBgn0035420.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	35342214	35349366	.	-	.	ID=FBgn0035420.1.mrna2;geneID=FBgn0035420.1.path2;Name=FBgn0035420.1;Dir=sensecoverage=68.7;identity=98.9;matches=4650;mismatches=53;indels=0;unknowns=0;locus=RLOC_00007114
Chr1	stalkie_big_nohaplotig	exon	35342214	35342267	100	-	.	Parent=FBgn0035420.1.mrna2;Target=FBgn0035420.1 6796 6849 +
Chr1	stalkie_big_nohaplotig	exon	35343957	35344877	98	-	.	Parent=FBgn0035420.1.mrna2;Target=FBgn0035420.1 5875 6795 +
Chr1	stalkie_big_nohaplotig	exon	35344958	35345674	99	-	.	Parent=FBgn0035420.1.mrna2;Target=FBgn0035420.1 5158 5874 +
Chr1	stalkie_big_nohaplotig	exon	35345737	35346179	99	-	.	Parent=FBgn0035420.1.mrna2;Target=FBgn0035420.1 4715 5157 +
Chr1	stalkie_big_nohaplotig	exon	35346337	35347360	99	-	.	Parent=FBgn0035420.1.mrna2;Target=FBgn0035420.1 3691 4714 +
Chr1	stalkie_big_nohaplotig	exon	35347426	35347906	98	-	.	Parent=FBgn0035420.1.mrna2;Target=FBgn0035420.1 3210 3690 +
Chr1	stalkie_big_nohaplotig	exon	35348012	35348469	97	-	.	Parent=FBgn0035420.1.mrna2;Target=FBgn0035420.1 2752 3209 +
Chr1	stalkie_big_nohaplotig	exon	35348704	35348847	99	-	.	Parent=FBgn0035420.1.mrna2;Target=FBgn0035420.1 2608 2751 +
Chr1	stalkie_big_nohaplotig	exon	35348906	35349366	98	-	.	Parent=FBgn0035420.1.mrna2;Target=FBgn0035420.1 2147 2607 +
Chr1	stalkie_big_nohaplotig	CDS	35342214	35342267	.	-	2	Parent=FBgn0035420.1.mrna2;Target=FBgn0035420.1 6796 6849 +
Chr1	stalkie_big_nohaplotig	CDS	35343957	35344877	.	-	2	Parent=FBgn0035420.1.mrna2;Target=FBgn0035420.1 5875 6795 +
Chr1	stalkie_big_nohaplotig	CDS	35344958	35345674	.	-	2	Parent=FBgn0035420.1.mrna2;Target=FBgn0035420.1 5158 5874 +
Chr1	stalkie_big_nohaplotig	CDS	35345737	35346179	.	-	1	Parent=FBgn0035420.1.mrna2;Target=FBgn0035420.1 4715 5157 +
Chr1	stalkie_big_nohaplotig	CDS	35346337	35347360	.	-	2	Parent=FBgn0035420.1.mrna2;Target=FBgn0035420.1 3691 4714 +
Chr1	stalkie_big_nohaplotig	CDS	35347426	35347906	.	-	0	Parent=FBgn0035420.1.mrna2;Target=FBgn0035420.1 3210 3690 +
Chr1	stalkie_big_nohaplotig	CDS	35348012	35348469	.	-	2	Parent=FBgn0035420.1.mrna2;Target=FBgn0035420.1 2752 3209 +
Chr1	stalkie_big_nohaplotig	CDS	35348704	35348847	.	-	2	Parent=FBgn0035420.1.mrna2;Target=FBgn0035420.1 2608 2751 +
Chr1	stalkie_big_nohaplotig	CDS	35348906	35349366	.	-	1	Parent=FBgn0035420.1.mrna2;Target=FBgn0035420.1 2147 2607 +
Chr1	gffcl	locus	35400960	35402261	.	+	.	ID=RLOC_00007115;geneIDs=comp156481_c0_seq1.path1;transcripts=comp156481_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35400960	35402261	.	+	.	ID=comp156481_c0_seq1.mrna1;geneID=comp156481_c0_seq1.path1;Name=comp156481_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1076;mismatches=12;indels=1;unknowns=0;Target=comp156481_c0_seq1 178 2 .;locus=RLOC_00007115
Chr1	stalkie_big_nohaplotig	exon	35400960	35401603	99	+	.	Parent=comp156481_c0_seq1.mrna1;Target=comp156481_c0_seq1 643 1 .
Chr1	stalkie_big_nohaplotig	exon	35401817	35402261	97	+	.	Parent=comp156481_c0_seq1.mrna1;Target=comp156481_c0_seq1 1088 644 .
Chr1	stalkie_big_nohaplotig	CDS	35400961	35401137	.	+	0	Parent=comp156481_c0_seq1.mrna1
Chr1	gffcl	locus	35403009	35403209	.	+	.	ID=RLOC_00007116;geneIDs=comp144494_c0_seq1.path1;transcripts=comp144494_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35403009	35403209	.	+	.	ID=comp144494_c0_seq1.mrna1;geneID=comp144494_c0_seq1.path1;Name=comp144494_c0_seq1;Dir=indeterminatecoverage=89.3;identity=96.5;matches=194;mismatches=7;indels=0;unknowns=0;Target=comp144494_c0_seq1 201 1 .;CDS_Target=comp144494_c0_seq1 76 2 .;locus=RLOC_00007116
Chr1	stalkie_big_nohaplotig	exon	35403009	35403209	96	+	.	Parent=comp144494_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	35403010	35403084	.	+	0	Parent=comp144494_c0_seq1.mrna1
Chr1	gffcl	locus	35412600	35412800	.	+	.	ID=RLOC_00007117;geneIDs=comp144494_c0_seq1.path2;transcripts=comp144494_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	35412600	35412800	.	+	.	ID=comp144494_c0_seq1.mrna2;geneID=comp144494_c0_seq1.path2;Name=comp144494_c0_seq1;Dir=indeterminatecoverage=89.3;identity=96.5;matches=194;mismatches=7;indels=0;unknowns=0;Target=comp144494_c0_seq1 201 1 .;CDS_Target=comp144494_c0_seq1 76 2 .;locus=RLOC_00007117
Chr1	stalkie_big_nohaplotig	exon	35412600	35412800	96	+	.	Parent=comp144494_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	35412601	35412675	.	+	0	Parent=comp144494_c0_seq1.mrna2
Chr1	gffcl	locus	35424037	35424929	.	+	.	ID=RLOC_00007118;geneIDs=comp155945_c0_seq1.path1;transcripts=comp155945_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35424037	35424929	.	+	.	ID=comp155945_c0_seq1.mrna1;geneID=comp155945_c0_seq1.path1;Name=comp155945_c0_seq1;Dir=antisensecoverage=100.0;identity=98.6;matches=686;mismatches=10;indels=0;unknowns=0;locus=RLOC_00007118
Chr1	stalkie_big_nohaplotig	exon	35424037	35424300	97	+	.	Parent=comp155945_c0_seq1.mrna1;Target=comp155945_c0_seq1 433 696 -
Chr1	stalkie_big_nohaplotig	exon	35424434	35424472	100	+	.	Parent=comp155945_c0_seq1.mrna1;Target=comp155945_c0_seq1 394 432 -
Chr1	stalkie_big_nohaplotig	exon	35424537	35424929	98	+	.	Parent=comp155945_c0_seq1.mrna1;Target=comp155945_c0_seq1 1 393 -
Chr1	stalkie_big_nohaplotig	CDS	35424196	35424300	.	+	0	Parent=comp155945_c0_seq1.mrna1;Target=comp155945_c0_seq1 433 537 .
Chr1	stalkie_big_nohaplotig	CDS	35424434	35424436	.	+	0	Parent=comp155945_c0_seq1.mrna1;Target=comp155945_c0_seq1 430 432 .
Chr1	gffcl	locus	35461143	35537025	.	-	.	ID=RLOC_00007119;geneIDs=FBgn0011591.1.path1;transcripts=FBgn0011591.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35461143	35537025	.	-	.	ID=FBgn0011591.1.mrna1;geneID=FBgn0011591.1.path1;Name=FBgn0011591.1;Dir=sensecoverage=100.0;identity=99.7;matches=1454;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007119
Chr1	stalkie_big_nohaplotig	exon	35461143	35461375	100	-	.	Parent=FBgn0011591.1.mrna1;Target=FBgn0011591.1 1226 1458 +
Chr1	stalkie_big_nohaplotig	exon	35461461	35461635	100	-	.	Parent=FBgn0011591.1.mrna1;Target=FBgn0011591.1 1051 1225 +
Chr1	stalkie_big_nohaplotig	exon	35464892	35465030	100	-	.	Parent=FBgn0011591.1.mrna1;Target=FBgn0011591.1 912 1050 +
Chr1	stalkie_big_nohaplotig	exon	35483550	35483652	97	-	.	Parent=FBgn0011591.1.mrna1;Target=FBgn0011591.1 809 911 +
Chr1	stalkie_big_nohaplotig	exon	35495145	35495193	100	-	.	Parent=FBgn0011591.1.mrna1;Target=FBgn0011591.1 760 808 +
Chr1	stalkie_big_nohaplotig	exon	35518437	35518928	99	-	.	Parent=FBgn0011591.1.mrna1;Target=FBgn0011591.1 268 759 +
Chr1	stalkie_big_nohaplotig	exon	35536759	35537025	100	-	.	Parent=FBgn0011591.1.mrna1;Target=FBgn0011591.1 1 267 +
Chr1	stalkie_big_nohaplotig	CDS	35461143	35461375	.	-	2	Parent=FBgn0011591.1.mrna1;Target=FBgn0011591.1 1226 1458 +
Chr1	stalkie_big_nohaplotig	CDS	35461461	35461635	.	-	0	Parent=FBgn0011591.1.mrna1;Target=FBgn0011591.1 1051 1225 +
Chr1	stalkie_big_nohaplotig	CDS	35464892	35465030	.	-	1	Parent=FBgn0011591.1.mrna1;Target=FBgn0011591.1 912 1050 +
Chr1	stalkie_big_nohaplotig	CDS	35483550	35483652	.	-	2	Parent=FBgn0011591.1.mrna1;Target=FBgn0011591.1 809 911 +
Chr1	stalkie_big_nohaplotig	CDS	35495145	35495193	.	-	0	Parent=FBgn0011591.1.mrna1;Target=FBgn0011591.1 760 808 +
Chr1	stalkie_big_nohaplotig	CDS	35518437	35518928	.	-	0	Parent=FBgn0011591.1.mrna1;Target=FBgn0011591.1 268 759 +
Chr1	stalkie_big_nohaplotig	CDS	35536759	35537025	.	-	0	Parent=FBgn0011591.1.mrna1;Target=FBgn0011591.1 1 267 +
Chr1	gffcl	locus	35605359	35606376	.	+	.	ID=RLOC_00007120;geneIDs=comp162356_c1_seq1.path1;transcripts=comp162356_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35605359	35606376	.	+	.	ID=comp162356_c1_seq1.mrna1;geneID=comp162356_c1_seq1.path1;Name=comp162356_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1016;mismatches=2;indels=0;unknowns=0;Target=comp162356_c1_seq1 1018 1 .;CDS_Target=comp162356_c1_seq1 1017 1 .;locus=RLOC_00007120
Chr1	stalkie_big_nohaplotig	exon	35605359	35606376	99	+	.	Parent=comp162356_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	35605359	35606375	.	+	0	Parent=comp162356_c1_seq1.mrna1
Chr1	gffcl	locus	35675864	35676307	.	+	.	ID=RLOC_00007122;geneIDs=comp103688_c0_seq1.path1;transcripts=comp103688_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35675864	35676307	.	+	.	ID=comp103688_c0_seq1.mrna1;geneID=comp103688_c0_seq1.path1;Name=comp103688_c0_seq1;Dir=indeterminatecoverage=99.8;identity=83.3;matches=425;mismatches=17;indels=68;unknowns=0;Target=comp103688_c0_seq1 509 2 .;CDS_Target=comp103688_c0_seq1 370 317 .;locus=RLOC_00007122
Chr1	stalkie_big_nohaplotig	exon	35675864	35676307	83	+	.	Parent=comp103688_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	35676152	35676167	.	+	0	Parent=comp103688_c0_seq1.mrna1
Chr1	gffcl	locus	35676506	35680784	.	-	.	ID=RLOC_00007123;geneIDs=comp149181_c0_seq1.path1;transcripts=comp149181_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35676506	35680784	.	-	.	ID=comp149181_c0_seq1.mrna1;geneID=comp149181_c0_seq1.path1;Name=comp149181_c0_seq1;Dir=antisensecoverage=94.4;identity=97.6;matches=739;mismatches=18;indels=0;unknowns=0;locus=RLOC_00007123
Chr1	stalkie_big_nohaplotig	exon	35676506	35676805	96	-	.	Parent=comp149181_c0_seq1.mrna1;Target=comp149181_c0_seq1 46 345 -
Chr1	stalkie_big_nohaplotig	exon	35676870	35676993	98	-	.	Parent=comp149181_c0_seq1.mrna1;Target=comp149181_c0_seq1 346 469 -
Chr1	stalkie_big_nohaplotig	exon	35677046	35677239	97	-	.	Parent=comp149181_c0_seq1.mrna1;Target=comp149181_c0_seq1 470 663 -
Chr1	stalkie_big_nohaplotig	exon	35680646	35680784	98	-	.	Parent=comp149181_c0_seq1.mrna1;Target=comp149181_c0_seq1 664 802 -
Chr1	stalkie_big_nohaplotig	CDS	35676697	35676805	.	-	1	Parent=comp149181_c0_seq1.mrna1;Target=comp149181_c0_seq1 237 345 .
Chr1	stalkie_big_nohaplotig	CDS	35676870	35676993	.	-	2	Parent=comp149181_c0_seq1.mrna1;Target=comp149181_c0_seq1 346 469 .
Chr1	stalkie_big_nohaplotig	CDS	35677046	35677133	.	-	0	Parent=comp149181_c0_seq1.mrna1;Target=comp149181_c0_seq1 470 557 .
Chr1	gffcl	locus	35689246	35689729	.	-	.	ID=RLOC_00007124;geneIDs=comp147316_c0_seq1.path1;transcripts=comp147316_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35689246	35689729	.	-	.	ID=comp147316_c0_seq1.mrna1;geneID=comp147316_c0_seq1.path1;Name=comp147316_c0_seq1;Dir=sensecoverage=100.0;identity=97.9;matches=416;mismatches=5;indels=4;unknowns=0;locus=RLOC_00007124
Chr1	stalkie_big_nohaplotig	exon	35689246	35689374	100	-	.	Parent=comp147316_c0_seq1.mrna1;Target=comp147316_c0_seq1 297 425 +
Chr1	stalkie_big_nohaplotig	exon	35689438	35689729	96	-	.	Parent=comp147316_c0_seq1.mrna1;Target=comp147316_c0_seq1 1 296 +
Chr1	stalkie_big_nohaplotig	CDS	35689247	35689374	.	-	2	Parent=comp147316_c0_seq1.mrna1;Target=comp147316_c0_seq1 297 424 +
Chr1	stalkie_big_nohaplotig	CDS	35689438	35689459	.	-	0	Parent=comp147316_c0_seq1.mrna1;Target=comp147316_c0_seq1 275 296 +
Chr1	gffcl	locus	35690189	35690802	.	-	.	ID=RLOC_00007125;geneIDs=comp57501_c0_seq1.path1;transcripts=comp57501_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35690189	35690802	.	-	.	ID=comp57501_c0_seq1.mrna1;geneID=comp57501_c0_seq1.path1;Name=comp57501_c0_seq1;Dir=antisensecoverage=92.7;identity=97.9;matches=460;mismatches=10;indels=0;unknowns=0;locus=RLOC_00007125
Chr1	stalkie_big_nohaplotig	exon	35690189	35690405	98	-	.	Parent=comp57501_c0_seq1.mrna1;Target=comp57501_c0_seq1 24 240 -
Chr1	stalkie_big_nohaplotig	exon	35690473	35690593	96	-	.	Parent=comp57501_c0_seq1.mrna1;Target=comp57501_c0_seq1 241 361 -
Chr1	stalkie_big_nohaplotig	exon	35690671	35690802	98	-	.	Parent=comp57501_c0_seq1.mrna1;Target=comp57501_c0_seq1 362 493 -
Chr1	stalkie_big_nohaplotig	CDS	35690306	35690405	.	-	1	Parent=comp57501_c0_seq1.mrna1;Target=comp57501_c0_seq1 141 240 .
Chr1	stalkie_big_nohaplotig	CDS	35690473	35690593	.	-	2	Parent=comp57501_c0_seq1.mrna1;Target=comp57501_c0_seq1 241 361 .
Chr1	stalkie_big_nohaplotig	CDS	35690671	35690770	.	-	0	Parent=comp57501_c0_seq1.mrna1;Target=comp57501_c0_seq1 362 461 .
Chr1	gffcl	locus	35719795	35720955	.	+	.	ID=RLOC_00007126;geneIDs=comp158498_c0_seq1.path1;transcripts=comp158498_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35719795	35720955	.	+	.	ID=comp158498_c0_seq1.mrna1;geneID=comp158498_c0_seq1.path1;Name=comp158498_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.8;matches=1137;mismatches=23;indels=2;unknowns=0;Target=comp158498_c0_seq1 1161 1 .;CDS_Target=comp158498_c0_seq1 1098 118 .;locus=RLOC_00007126
Chr1	stalkie_big_nohaplotig	exon	35719795	35720955	97	+	.	Parent=comp158498_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	35719912	35720892	.	+	0	Parent=comp158498_c0_seq1.mrna1
Chr1	gffcl	locus	35733652	35734887	.	-	.	ID=RLOC_00007127;geneIDs=FBgn0005278.1.path1;transcripts=FBgn0005278.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35733652	35734887	.	-	.	ID=FBgn0005278.1.mrna1;geneID=FBgn0005278.1.path1;Name=FBgn0005278.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1231;mismatches=5;indels=0;unknowns=0;Target=FBgn0005278.1 1236 1 .;locus=RLOC_00007127
Chr1	stalkie_big_nohaplotig	exon	35733652	35734887	99	-	.	Parent=FBgn0005278.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	35733652	35734887	.	-	0	Parent=FBgn0005278.1.mrna1
Chr1	gffcl	locus	35748530	35749280	.	+	.	ID=RLOC_00007128;geneIDs=comp150351_c0_seq1.path1;transcripts=comp150351_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35748530	35749280	.	+	.	ID=comp150351_c0_seq1.mrna1;geneID=comp150351_c0_seq1.path1;Name=comp150351_c0_seq1;Dir=indeterminatecoverage=67.8;identity=96.7;matches=739;mismatches=11;indels=14;unknowns=0;Target=comp150351_c0_seq1 763 1 .;CDS_Target=comp150351_c0_seq1 186 73 .;locus=RLOC_00007128
Chr1	stalkie_big_nohaplotig	exon	35748530	35749280	96	+	.	Parent=comp150351_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	35748602	35748715	.	+	0	Parent=comp150351_c0_seq1.mrna1
Chr1	gffcl	locus	35755873	35757922	.	+	.	ID=RLOC_00007129;geneIDs=comp119383_c0_seq1.path1;transcripts=comp119383_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35755873	35757922	.	+	.	ID=comp119383_c0_seq1.mrna1;geneID=comp119383_c0_seq1.path1;Name=comp119383_c0_seq1;Dir=antisensecoverage=99.8;identity=99.4;matches=614;mismatches=4;indels=0;unknowns=0;Target=comp119383_c0_seq1 152 466 .;locus=RLOC_00007129
Chr1	stalkie_big_nohaplotig	exon	35755873	35755889	100	+	.	Parent=comp119383_c0_seq1.mrna1;Target=comp119383_c0_seq1 603 619 -
Chr1	stalkie_big_nohaplotig	exon	35757322	35757922	99	+	.	Parent=comp119383_c0_seq1.mrna1;Target=comp119383_c0_seq1 2 602 -
Chr1	stalkie_big_nohaplotig	CDS	35757458	35757772	.	+	0	Parent=comp119383_c0_seq1.mrna1
Chr1	gffcl	locus	35768029	35770201	.	-	.	ID=RLOC_00007130;geneIDs=comp148993_c0_seq1.path1;transcripts=comp148993_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35768029	35770201	.	-	.	ID=comp148993_c0_seq1.mrna1;geneID=comp148993_c0_seq1.path1;Name=comp148993_c0_seq1;Dir=sensecoverage=98.4;identity=99.2;matches=1816;mismatches=10;indels=5;unknowns=0;locus=RLOC_00007130
Chr1	stalkie_big_nohaplotig	exon	35768029	35768285	99	-	.	Parent=comp148993_c0_seq1.mrna1;Target=comp148993_c0_seq1 1570 1828 +
Chr1	stalkie_big_nohaplotig	exon	35768344	35768408	100	-	.	Parent=comp148993_c0_seq1.mrna1;Target=comp148993_c0_seq1 1505 1569 +
Chr1	stalkie_big_nohaplotig	exon	35768466	35768681	100	-	.	Parent=comp148993_c0_seq1.mrna1;Target=comp148993_c0_seq1 1289 1504 +
Chr1	stalkie_big_nohaplotig	exon	35768782	35768957	98	-	.	Parent=comp148993_c0_seq1.mrna1;Target=comp148993_c0_seq1 1116 1288 +
Chr1	stalkie_big_nohaplotig	exon	35769025	35769562	99	-	.	Parent=comp148993_c0_seq1.mrna1;Target=comp148993_c0_seq1 578 1115 +
Chr1	stalkie_big_nohaplotig	exon	35769625	35770201	98	-	.	Parent=comp148993_c0_seq1.mrna1;Target=comp148993_c0_seq1 1 577 +
Chr1	stalkie_big_nohaplotig	CDS	35769338	35769562	.	-	0	Parent=comp148993_c0_seq1.mrna1;Target=comp148993_c0_seq1 578 802 +
Chr1	stalkie_big_nohaplotig	CDS	35769625	35770056	.	-	0	Parent=comp148993_c0_seq1.mrna1;Target=comp148993_c0_seq1 146 577 +
Chr1	gffcl	locus	35784247	35785005	.	-	.	ID=RLOC_00007131;geneIDs=comp149878_c0_seq1.path1;transcripts=comp149878_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35784247	35785005	.	-	.	ID=comp149878_c0_seq1.mrna1;geneID=comp149878_c0_seq1.path1;Name=comp149878_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.2;matches=754;mismatches=5;indels=1;unknowns=0;Target=comp149878_c0_seq1 761 2 .;CDS_Target=comp149878_c0_seq1 229 146 .;locus=RLOC_00007131
Chr1	stalkie_big_nohaplotig	exon	35784247	35785005	99	-	.	Parent=comp149878_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	35784778	35784861	.	-	0	Parent=comp149878_c0_seq1.mrna1
Chr1	gffcl	locus	35785085	35785414	.	+	.	ID=RLOC_00007132;geneIDs=comp97630_c0_seq1.path1;transcripts=comp97630_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35785085	35785414	.	+	.	ID=comp97630_c0_seq1.mrna1;geneID=comp97630_c0_seq1.path1;Name=comp97630_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=328;mismatches=2;indels=0;unknowns=0;Target=comp97630_c0_seq1 330 1 .;CDS_Target=comp97630_c0_seq1 95 3 .;locus=RLOC_00007132
Chr1	stalkie_big_nohaplotig	exon	35785085	35785414	99	+	.	Parent=comp97630_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	35785087	35785179	.	+	0	Parent=comp97630_c0_seq1.mrna1
Chr1	gffcl	locus	35836378	35837167	.	-	.	ID=RLOC_00007133;geneIDs=comp147785_c0_seq1.path1;transcripts=comp147785_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35836378	35837167	.	-	.	ID=comp147785_c0_seq1.mrna1;geneID=comp147785_c0_seq1.path1;Name=comp147785_c0_seq1;Dir=sensecoverage=98.5;identity=99.4;matches=646;mismatches=4;indels=0;unknowns=0;Target=comp147785_c0_seq1 83 460 +;locus=RLOC_00007133
Chr1	stalkie_big_nohaplotig	exon	35836378	35836566	99	-	.	Parent=comp147785_c0_seq1.mrna1;Target=comp147785_c0_seq1 468 656 +
Chr1	stalkie_big_nohaplotig	exon	35836649	35837038	99	-	.	Parent=comp147785_c0_seq1.mrna1;Target=comp147785_c0_seq1 78 467 +
Chr1	stalkie_big_nohaplotig	exon	35837097	35837167	100	-	.	Parent=comp147785_c0_seq1.mrna1;Target=comp147785_c0_seq1 7 77 +
Chr1	stalkie_big_nohaplotig	CDS	35836656	35837033	.	-	0	Parent=comp147785_c0_seq1.mrna1
Chr1	gffcl	locus	35894570	35894897	.	+	.	ID=RLOC_00007134;geneIDs=comp773697_c0_seq1.path1;transcripts=comp773697_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35894570	35894897	.	+	.	ID=comp773697_c0_seq1.mrna1;geneID=comp773697_c0_seq1.path1;Name=comp773697_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=328;mismatches=0;indels=0;unknowns=0;Target=comp773697_c0_seq1 329 2 .;CDS_Target=comp773697_c0_seq1 186 109 .;locus=RLOC_00007134
Chr1	stalkie_big_nohaplotig	exon	35894570	35894897	100	+	.	Parent=comp773697_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	35894677	35894754	.	+	0	Parent=comp773697_c0_seq1.mrna1
Chr1	gffcl	locus	35896092	35897204	.	-	.	ID=RLOC_00007135;geneIDs=comp149823_c0_seq1.path1;transcripts=comp149823_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35896092	35897204	.	-	.	ID=comp149823_c0_seq1.mrna1;geneID=comp149823_c0_seq1.path1;Name=comp149823_c0_seq1;Dir=sensecoverage=100.0;identity=89.9;matches=868;mismatches=61;indels=36;unknowns=0;Target=comp149823_c0_seq1 108 161 +;locus=RLOC_00007135
Chr1	stalkie_big_nohaplotig	exon	35896092	35896830	87	-	.	Parent=comp149823_c0_seq1.mrna1;Target=comp149823_c0_seq1 211 946 +
Chr1	stalkie_big_nohaplotig	exon	35896900	35897031	97	-	.	Parent=comp149823_c0_seq1.mrna1;Target=comp149823_c0_seq1 78 210 +
Chr1	stalkie_big_nohaplotig	exon	35897128	35897204	96	-	.	Parent=comp149823_c0_seq1.mrna1;Target=comp149823_c0_seq1 1 77 +
Chr1	stalkie_big_nohaplotig	CDS	35896949	35897001	.	-	0	Parent=comp149823_c0_seq1.mrna1
Chr1	gffcl	locus	35935667	35938092	.	-	.	ID=RLOC_00007136;geneIDs=FBgn0035293.1.path1;transcripts=FBgn0035293.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35935667	35938092	.	-	.	ID=FBgn0035293.1.mrna1;geneID=FBgn0035293.1.path1;Name=FBgn0035293.1;Dir=sensecoverage=100.0;identity=99.7;matches=2039;mismatches=7;indels=0;unknowns=0;locus=RLOC_00007136
Chr1	stalkie_big_nohaplotig	exon	35935667	35935940	100	-	.	Parent=FBgn0035293.1.mrna1;Target=FBgn0035293.1 1773 2046 +
Chr1	stalkie_big_nohaplotig	exon	35936002	35936451	98	-	.	Parent=FBgn0035293.1.mrna1;Target=FBgn0035293.1 1323 1772 +
Chr1	stalkie_big_nohaplotig	exon	35936514	35936873	99	-	.	Parent=FBgn0035293.1.mrna1;Target=FBgn0035293.1 963 1322 +
Chr1	stalkie_big_nohaplotig	exon	35936930	35937045	100	-	.	Parent=FBgn0035293.1.mrna1;Target=FBgn0035293.1 847 962 +
Chr1	stalkie_big_nohaplotig	exon	35937114	35937275	100	-	.	Parent=FBgn0035293.1.mrna1;Target=FBgn0035293.1 685 846 +
Chr1	stalkie_big_nohaplotig	exon	35937344	35937492	100	-	.	Parent=FBgn0035293.1.mrna1;Target=FBgn0035293.1 536 684 +
Chr1	stalkie_big_nohaplotig	exon	35937558	35938092	100	-	.	Parent=FBgn0035293.1.mrna1;Target=FBgn0035293.1 1 535 +
Chr1	stalkie_big_nohaplotig	CDS	35935667	35935940	.	-	1	Parent=FBgn0035293.1.mrna1;Target=FBgn0035293.1 1773 2046 +
Chr1	stalkie_big_nohaplotig	CDS	35936002	35936451	.	-	1	Parent=FBgn0035293.1.mrna1;Target=FBgn0035293.1 1323 1772 +
Chr1	stalkie_big_nohaplotig	CDS	35936514	35936873	.	-	1	Parent=FBgn0035293.1.mrna1;Target=FBgn0035293.1 963 1322 +
Chr1	stalkie_big_nohaplotig	CDS	35936930	35937045	.	-	0	Parent=FBgn0035293.1.mrna1;Target=FBgn0035293.1 847 962 +
Chr1	stalkie_big_nohaplotig	CDS	35937114	35937275	.	-	0	Parent=FBgn0035293.1.mrna1;Target=FBgn0035293.1 685 846 +
Chr1	stalkie_big_nohaplotig	CDS	35937344	35937492	.	-	2	Parent=FBgn0035293.1.mrna1;Target=FBgn0035293.1 536 684 +
Chr1	stalkie_big_nohaplotig	CDS	35937558	35938092	.	-	0	Parent=FBgn0035293.1.mrna1;Target=FBgn0035293.1 1 535 +
Chr1	gffcl	locus	35938297	35949982	.	-	.	ID=RLOC_00007137;geneIDs=comp117531_c0_seq1.path1;transcripts=comp117531_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35938297	35949982	.	-	.	ID=comp117531_c0_seq1.mrna1;geneID=comp117531_c0_seq1.path1;Name=comp117531_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=378;mismatches=1;indels=0;unknowns=0;Target=comp117531_c0_seq1 293 379 .;locus=RLOC_00007137
Chr1	stalkie_big_nohaplotig	exon	35938297	35938339	100	-	.	Parent=comp117531_c0_seq1.mrna1;Target=comp117531_c0_seq1 1 43 -
Chr1	stalkie_big_nohaplotig	exon	35949647	35949982	99	-	.	Parent=comp117531_c0_seq1.mrna1;Target=comp117531_c0_seq1 44 379 -
Chr1	stalkie_big_nohaplotig	CDS	35949896	35949982	.	-	0	Parent=comp117531_c0_seq1.mrna1
Chr1	gffcl	locus	35978770	37459353	.	-	.	ID=RLOC_00007139;geneIDs=comp155760_c0_seq1.path1;transcripts=comp155760_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35978770	37459353	.	-	.	ID=comp155760_c0_seq1.mrna1;geneID=comp155760_c0_seq1.path1;Name=comp155760_c0_seq1;Dir=antisensecoverage=94.2;identity=94.9;matches=1191;mismatches=40;indels=24;unknowns=0;locus=RLOC_00007139
Chr1	stalkie_big_nohaplotig	exon	35978770	35979530	92	-	.	Parent=comp155760_c0_seq1.mrna1;Target=comp155760_c0_seq1 18 780 -
Chr1	stalkie_big_nohaplotig	exon	35979600	35980001	98	-	.	Parent=comp155760_c0_seq1.mrna1;Target=comp155760_c0_seq1 781 1182 -
Chr1	stalkie_big_nohaplotig	exon	37338618	37338623	100	-	.	Parent=comp155760_c0_seq1.mrna1;Target=comp155760_c0_seq1 1183 1188 -
Chr1	stalkie_big_nohaplotig	exon	37342407	37342410	100	-	.	Parent=comp155760_c0_seq1.mrna1;Target=comp155760_c0_seq1 1189 1192 -
Chr1	stalkie_big_nohaplotig	exon	37356657	37356661	100	-	.	Parent=comp155760_c0_seq1.mrna1;Target=comp155760_c0_seq1 1193 1197 -
Chr1	stalkie_big_nohaplotig	exon	37364499	37364502	100	-	.	Parent=comp155760_c0_seq1.mrna1;Target=comp155760_c0_seq1 1198 1201 -
Chr1	stalkie_big_nohaplotig	exon	37375671	37375673	100	-	.	Parent=comp155760_c0_seq1.mrna1;Target=comp155760_c0_seq1 1202 1204 -
Chr1	stalkie_big_nohaplotig	exon	37380248	37380251	100	-	.	Parent=comp155760_c0_seq1.mrna1;Target=comp155760_c0_seq1 1205 1208 -
Chr1	stalkie_big_nohaplotig	exon	37388072	37388076	100	-	.	Parent=comp155760_c0_seq1.mrna1;Target=comp155760_c0_seq1 1209 1213 -
Chr1	stalkie_big_nohaplotig	exon	37392811	37392814	100	-	.	Parent=comp155760_c0_seq1.mrna1;Target=comp155760_c0_seq1 1214 1217 -
Chr1	stalkie_big_nohaplotig	exon	37410041	37410047	100	-	.	Parent=comp155760_c0_seq1.mrna1;Target=comp155760_c0_seq1 1218 1224 -
Chr1	stalkie_big_nohaplotig	exon	37416062	37416066	100	-	.	Parent=comp155760_c0_seq1.mrna1;Target=comp155760_c0_seq1 1225 1229 -
Chr1	stalkie_big_nohaplotig	exon	37422177	37422183	100	-	.	Parent=comp155760_c0_seq1.mrna1;Target=comp155760_c0_seq1 1230 1236 -
Chr1	stalkie_big_nohaplotig	exon	37422386	37422394	100	-	.	Parent=comp155760_c0_seq1.mrna1;Target=comp155760_c0_seq1 1237 1245 -
Chr1	stalkie_big_nohaplotig	exon	37436016	37436023	100	-	.	Parent=comp155760_c0_seq1.mrna1;Target=comp155760_c0_seq1 1246 1253 -
Chr1	stalkie_big_nohaplotig	exon	37459346	37459353	100	-	.	Parent=comp155760_c0_seq1.mrna1;Target=comp155760_c0_seq1 1254 1261 -
Chr1	stalkie_big_nohaplotig	CDS	35979267	35979530	.	-	0	Parent=comp155760_c0_seq1.mrna1;Target=comp155760_c0_seq1 517 780 .
Chr1	stalkie_big_nohaplotig	CDS	35979600	35979902	.	-	0	Parent=comp155760_c0_seq1.mrna1;Target=comp155760_c0_seq1 781 1083 .
Chr1	gffcl	locus	35985129	35989227	.	+	.	ID=RLOC_00007140;geneIDs=comp147829_c0_seq1.path1;transcripts=comp147829_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	35985129	35989227	.	+	.	ID=comp147829_c0_seq1.mrna1;geneID=comp147829_c0_seq1.path1;Name=comp147829_c0_seq1;Dir=sensecoverage=77.0;identity=98.7;matches=1557;mismatches=15;indels=6;unknowns=0;locus=RLOC_00007140
Chr1	stalkie_big_nohaplotig	exon	35985129	35985742	98	+	.	Parent=comp147829_c0_seq1.mrna1;Target=comp147829_c0_seq1 461 1074 +
Chr1	stalkie_big_nohaplotig	exon	35988141	35988552	99	+	.	Parent=comp147829_c0_seq1.mrna1;Target=comp147829_c0_seq1 1075 1486 +
Chr1	stalkie_big_nohaplotig	exon	35988629	35988894	99	+	.	Parent=comp147829_c0_seq1.mrna1;Target=comp147829_c0_seq1 1487 1753 +
Chr1	stalkie_big_nohaplotig	exon	35988948	35989227	96	+	.	Parent=comp147829_c0_seq1.mrna1;Target=comp147829_c0_seq1 1754 2038 +
Chr1	stalkie_big_nohaplotig	CDS	35988163	35988552	.	+	0	Parent=comp147829_c0_seq1.mrna1;Target=comp147829_c0_seq1 1097 1486 +
Chr1	stalkie_big_nohaplotig	CDS	35988629	35988862	.	+	0	Parent=comp147829_c0_seq1.mrna1;Target=comp147829_c0_seq1 1487 1720 +
Chr1	gffcl	locus	36030476	36030830	.	-	.	ID=RLOC_00007141;geneIDs=Dp_FBgn0261023.path1;transcripts=Dp_FBgn0261023.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36030476	36030830	.	-	.	ID=Dp_FBgn0261023.mrna1;geneID=Dp_FBgn0261023.path1;Name=Dp_FBgn0261023;Dir=indeterminatecoverage=94.7;identity=99.7;matches=354;mismatches=1;indels=0;unknowns=0;Target=Dp_FBgn0261023 355 1 .;CDS_Target=Dp_FBgn0261023 354 1 .;locus=RLOC_00007141
Chr1	stalkie_big_nohaplotig	exon	36030476	36030830	99	-	.	Parent=Dp_FBgn0261023.mrna1
Chr1	stalkie_big_nohaplotig	CDS	36030477	36030830	.	-	0	Parent=Dp_FBgn0261023.mrna1
Chr1	gffcl	locus	36035587	36035757	.	-	.	ID=RLOC_00007142;geneIDs=FBgn0259243.1.path1;transcripts=FBgn0259243.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36035587	36035757	.	-	.	ID=FBgn0259243.1.mrna1;geneID=FBgn0259243.1.path1;Name=FBgn0259243.1;Dir=indeterminatecoverage=15.2;identity=100.0;matches=171;mismatches=0;indels=0;unknowns=0;Target=FBgn0259243.1 171 1 .;locus=RLOC_00007142
Chr1	stalkie_big_nohaplotig	exon	36035587	36035757	100	-	.	Parent=FBgn0259243.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	36035587	36035757	.	-	0	Parent=FBgn0259243.1.mrna1
Chr1	gffcl	locus	36037604	36039929	.	+	.	ID=RLOC_00007143;geneIDs=FBgn0037028.1.path1;transcripts=FBgn0037028.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36037604	36039929	.	+	.	ID=FBgn0037028.1.mrna1;geneID=FBgn0037028.1.path1;Name=FBgn0037028.1;Dir=sensecoverage=100.0;identity=98.4;matches=2232;mismatches=26;indels=10;unknowns=0;Target=FBgn0037028.1 2 40 +;locus=RLOC_00007143
Chr1	stalkie_big_nohaplotig	exon	36037604	36037865	99	+	.	Parent=FBgn0037028.1.mrna1;Target=FBgn0037028.1 2 262 +
Chr1	stalkie_big_nohaplotig	exon	36037933	36039929	98	+	.	Parent=FBgn0037028.1.mrna1;Target=FBgn0037028.1 263 2268 +
Chr1	stalkie_big_nohaplotig	CDS	36037604	36037643	.	+	0	Parent=FBgn0037028.1.mrna1
Chr1	gffcl	locus	36041182	36045224	.	-	.	ID=RLOC_00007144;geneIDs=FBgn0035137.1.path1;transcripts=FBgn0035137.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36041182	36045224	.	-	.	ID=FBgn0035137.1.mrna1;geneID=FBgn0035137.1.path1;Name=FBgn0035137.1;Dir=sensecoverage=100.0;identity=99.2;matches=3765;mismatches=30;indels=0;unknowns=0;locus=RLOC_00007144
Chr1	stalkie_big_nohaplotig	exon	36041182	36041343	96	-	.	Parent=FBgn0035137.1.mrna1;Target=FBgn0035137.1 3634 3795 +
Chr1	stalkie_big_nohaplotig	exon	36041414	36042056	98	-	.	Parent=FBgn0035137.1.mrna1;Target=FBgn0035137.1 2991 3633 +
Chr1	stalkie_big_nohaplotig	exon	36042110	36044483	99	-	.	Parent=FBgn0035137.1.mrna1;Target=FBgn0035137.1 617 2990 +
Chr1	stalkie_big_nohaplotig	exon	36044539	36045100	99	-	.	Parent=FBgn0035137.1.mrna1;Target=FBgn0035137.1 55 616 +
Chr1	stalkie_big_nohaplotig	exon	36045171	36045224	98	-	.	Parent=FBgn0035137.1.mrna1;Target=FBgn0035137.1 1 54 +
Chr1	stalkie_big_nohaplotig	CDS	36041182	36041343	.	-	0	Parent=FBgn0035137.1.mrna1;Target=FBgn0035137.1 3634 3795 +
Chr1	stalkie_big_nohaplotig	CDS	36041414	36042056	.	-	1	Parent=FBgn0035137.1.mrna1;Target=FBgn0035137.1 2991 3633 +
Chr1	stalkie_big_nohaplotig	CDS	36042110	36044483	.	-	2	Parent=FBgn0035137.1.mrna1;Target=FBgn0035137.1 617 2990 +
Chr1	stalkie_big_nohaplotig	CDS	36044539	36045100	.	-	0	Parent=FBgn0035137.1.mrna1;Target=FBgn0035137.1 55 616 +
Chr1	stalkie_big_nohaplotig	CDS	36045171	36045224	.	-	0	Parent=FBgn0035137.1.mrna1;Target=FBgn0035137.1 1 54 +
Chr1	gffcl	locus	36062194	36071300	.	.	.	ID=RLOC_00007145;geneIDs=FBgn0035500.path1,comp143522_c1_seq1.path1;transcripts=FBgn0035500.mrna1,comp143522_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36062194	36071300	.	+	.	ID=FBgn0035500.mrna1;geneID=FBgn0035500.path1;Name=FBgn0035500;Dir=sensecoverage=100.0;identity=99.9;matches=1972;mismatches=0;indels=2;unknowns=0;locus=RLOC_00007145
Chr1	stalkie_big_nohaplotig	exon	36062194	36062281	100	+	.	Parent=FBgn0035500.mrna1;Target=FBgn0035500 1 88 +
Chr1	stalkie_big_nohaplotig	exon	36063129	36063250	99	+	.	Parent=FBgn0035500.mrna1;Target=FBgn0035500 89 211 +
Chr1	stalkie_big_nohaplotig	exon	36063941	36064159	100	+	.	Parent=FBgn0035500.mrna1;Target=FBgn0035500 212 430 +
Chr1	stalkie_big_nohaplotig	exon	36067956	36068093	100	+	.	Parent=FBgn0035500.mrna1;Target=FBgn0035500 431 568 +
Chr1	stalkie_big_nohaplotig	exon	36068905	36069432	100	+	.	Parent=FBgn0035500.mrna1;Target=FBgn0035500 569 1096 +
Chr1	stalkie_big_nohaplotig	exon	36070153	36070326	100	+	.	Parent=FBgn0035500.mrna1;Target=FBgn0035500 1097 1270 +
Chr1	stalkie_big_nohaplotig	exon	36070528	36070697	100	+	.	Parent=FBgn0035500.mrna1;Target=FBgn0035500 1271 1440 +
Chr1	stalkie_big_nohaplotig	exon	36070768	36071300	99	+	.	Parent=FBgn0035500.mrna1;Target=FBgn0035500 1441 1974 +
Chr1	stalkie_big_nohaplotig	CDS	36062196	36062281	.	+	0	Parent=FBgn0035500.mrna1;Target=FBgn0035500 3 88 +
Chr1	stalkie_big_nohaplotig	CDS	36063129	36063250	.	+	1	Parent=FBgn0035500.mrna1;Target=FBgn0035500 89 211 +
Chr1	stalkie_big_nohaplotig	mRNA	36068072	36068517	.	-	.	ID=comp143522_c1_seq1.mrna1;geneID=comp143522_c1_seq1.path1;Name=comp143522_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=441;mismatches=5;indels=6;unknowns=0;Target=comp143522_c1_seq1 452 1 .;CDS_Target=comp143522_c1_seq1 422 300 .;locus=RLOC_00007145
Chr1	stalkie_big_nohaplotig	exon	36068072	36068517	97	-	.	Parent=comp143522_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	36068102	36068218	.	-	0	Parent=comp143522_c1_seq1.mrna1
Chr1	gffcl	locus	36076488	36076891	.	+	.	ID=RLOC_00007146;geneIDs=comp109577_c0_seq1.path1;transcripts=comp109577_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36076488	36076891	.	+	.	ID=comp109577_c0_seq1.mrna1;geneID=comp109577_c0_seq1.path1;Name=comp109577_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=403;mismatches=1;indels=0;unknowns=0;Target=comp109577_c0_seq1 404 1 .;CDS_Target=comp109577_c0_seq1 379 305 .;locus=RLOC_00007146
Chr1	stalkie_big_nohaplotig	exon	36076488	36076891	99	+	.	Parent=comp109577_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	36076792	36076866	.	+	0	Parent=comp109577_c0_seq1.mrna1
Chr1	gffcl	locus	36080985	36111369	.	+	.	ID=RLOC_00007147;geneIDs=FBgn0035499.1.path1;transcripts=FBgn0035499.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36080985	36111369	.	+	.	ID=FBgn0035499.1.mrna1;geneID=FBgn0035499.1.path1;Name=FBgn0035499.1;Dir=sensecoverage=100.0;identity=99.8;matches=566;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007147
Chr1	stalkie_big_nohaplotig	exon	36080985	36081041	100	+	.	Parent=FBgn0035499.1.mrna1;Target=FBgn0035499.1 1 57 +
Chr1	stalkie_big_nohaplotig	exon	36110495	36110714	99	+	.	Parent=FBgn0035499.1.mrna1;Target=FBgn0035499.1 58 277 +
Chr1	stalkie_big_nohaplotig	exon	36111016	36111137	100	+	.	Parent=FBgn0035499.1.mrna1;Target=FBgn0035499.1 278 399 +
Chr1	stalkie_big_nohaplotig	exon	36111202	36111369	100	+	.	Parent=FBgn0035499.1.mrna1;Target=FBgn0035499.1 400 567 +
Chr1	stalkie_big_nohaplotig	CDS	36080985	36081041	.	+	0	Parent=FBgn0035499.1.mrna1;Target=FBgn0035499.1 1 57 +
Chr1	stalkie_big_nohaplotig	CDS	36110495	36110714	.	+	0	Parent=FBgn0035499.1.mrna1;Target=FBgn0035499.1 58 277 +
Chr1	stalkie_big_nohaplotig	CDS	36111016	36111137	.	+	2	Parent=FBgn0035499.1.mrna1;Target=FBgn0035499.1 278 399 +
Chr1	stalkie_big_nohaplotig	CDS	36111202	36111369	.	+	0	Parent=FBgn0035499.1.mrna1;Target=FBgn0035499.1 400 567 +
Chr1	gffcl	locus	36116019	36116554	.	+	.	ID=RLOC_00007148;geneIDs=FBgn0035534.1.path1;transcripts=FBgn0035534.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36116019	36116554	.	+	.	ID=FBgn0035534.1.mrna1;geneID=FBgn0035534.1.path1;Name=FBgn0035534.1;Dir=sensecoverage=100.0;identity=99.6;matches=478;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007148
Chr1	stalkie_big_nohaplotig	exon	36116019	36116102	98	+	.	Parent=FBgn0035534.1.mrna1;Target=FBgn0035534.1 1 84 +
Chr1	stalkie_big_nohaplotig	exon	36116159	36116554	99	+	.	Parent=FBgn0035534.1.mrna1;Target=FBgn0035534.1 85 480 +
Chr1	stalkie_big_nohaplotig	CDS	36116019	36116102	.	+	0	Parent=FBgn0035534.1.mrna1;Target=FBgn0035534.1 1 84 +
Chr1	stalkie_big_nohaplotig	CDS	36116159	36116554	.	+	0	Parent=FBgn0035534.1.mrna1;Target=FBgn0035534.1 85 480 +
Chr1	gffcl	locus	36116641	36119756	.	-	.	ID=RLOC_00007149;geneIDs=FBgn0036038.1.path1;transcripts=FBgn0036038.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36116641	36119756	.	-	.	ID=FBgn0036038.1.mrna1;geneID=FBgn0036038.1.path1;Name=FBgn0036038.1;Dir=sensecoverage=100.0;identity=99.6;matches=3045;mismatches=12;indels=0;unknowns=0;locus=RLOC_00007149
Chr1	stalkie_big_nohaplotig	exon	36116641	36118188	99	-	.	Parent=FBgn0036038.1.mrna1;Target=FBgn0036038.1 1510 3057 +
Chr1	stalkie_big_nohaplotig	exon	36118248	36119756	99	-	.	Parent=FBgn0036038.1.mrna1;Target=FBgn0036038.1 1 1509 +
Chr1	stalkie_big_nohaplotig	CDS	36116641	36118188	.	-	0	Parent=FBgn0036038.1.mrna1;Target=FBgn0036038.1 1510 3057 +
Chr1	stalkie_big_nohaplotig	CDS	36118248	36119756	.	-	0	Parent=FBgn0036038.1.mrna1;Target=FBgn0036038.1 1 1509 +
Chr1	gffcl	locus	36122068	36123170	.	-	.	ID=RLOC_00007150;geneIDs=FBgn0036036.1.path1;transcripts=FBgn0036036.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36122068	36123170	.	-	.	ID=FBgn0036036.1.mrna1;geneID=FBgn0036036.1.path1;Name=FBgn0036036.1;Dir=sensecoverage=100.0;identity=99.3;matches=1040;mismatches=7;indels=0;unknowns=0;locus=RLOC_00007150
Chr1	stalkie_big_nohaplotig	exon	36122068	36123002	99	-	.	Parent=FBgn0036036.1.mrna1;Target=FBgn0036036.1 113 1047 +
Chr1	stalkie_big_nohaplotig	exon	36123059	36123170	98	-	.	Parent=FBgn0036036.1.mrna1;Target=FBgn0036036.1 1 112 +
Chr1	stalkie_big_nohaplotig	CDS	36122068	36123002	.	-	2	Parent=FBgn0036036.1.mrna1;Target=FBgn0036036.1 113 1047 +
Chr1	stalkie_big_nohaplotig	CDS	36123059	36123170	.	-	0	Parent=FBgn0036036.1.mrna1;Target=FBgn0036036.1 1 112 +
Chr1	gffcl	locus	36123563	36124084	.	+	.	ID=RLOC_00007151;geneIDs=FBgn0035529.1.path1;transcripts=FBgn0035529.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36123563	36124084	.	+	.	ID=FBgn0035529.1.mrna1;geneID=FBgn0035529.1.path1;Name=FBgn0035529.1;Dir=sensecoverage=100.0;identity=100.0;matches=459;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007151
Chr1	stalkie_big_nohaplotig	exon	36123563	36123684	100	+	.	Parent=FBgn0035529.1.mrna1;Target=FBgn0035529.1 1 122 +
Chr1	stalkie_big_nohaplotig	exon	36123748	36124084	100	+	.	Parent=FBgn0035529.1.mrna1;Target=FBgn0035529.1 123 459 +
Chr1	stalkie_big_nohaplotig	CDS	36123563	36123684	.	+	0	Parent=FBgn0035529.1.mrna1;Target=FBgn0035529.1 1 122 +
Chr1	stalkie_big_nohaplotig	CDS	36123748	36124084	.	+	1	Parent=FBgn0035529.1.mrna1;Target=FBgn0035529.1 123 459 +
Chr1	gffcl	locus	36127096	36135914	.	-	.	ID=RLOC_00007152;geneIDs=FBgn0066365.1.path1;transcripts=FBgn0066365.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36127096	36135914	.	-	.	ID=FBgn0066365.1.mrna1;geneID=FBgn0066365.1.path1;Name=FBgn0066365.1;Dir=sensecoverage=100.0;identity=99.9;matches=1819;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007152
Chr1	stalkie_big_nohaplotig	exon	36127096	36128814	99	-	.	Parent=FBgn0066365.1.mrna1;Target=FBgn0066365.1 103 1821 +
Chr1	stalkie_big_nohaplotig	exon	36135813	36135914	100	-	.	Parent=FBgn0066365.1.mrna1;Target=FBgn0066365.1 1 102 +
Chr1	stalkie_big_nohaplotig	CDS	36127096	36128814	.	-	0	Parent=FBgn0066365.1.mrna1;Target=FBgn0066365.1 103 1821 +
Chr1	stalkie_big_nohaplotig	CDS	36135813	36135914	.	-	0	Parent=FBgn0066365.1.mrna1;Target=FBgn0066365.1 1 102 +
Chr1	gffcl	locus	36132833	36133271	.	-	.	ID=RLOC_00007153;geneIDs=comp102784_c0_seq1.path1;transcripts=comp102784_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36132833	36133271	.	-	.	ID=comp102784_c0_seq1.mrna1;geneID=comp102784_c0_seq1.path1;Name=comp102784_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=439;mismatches=0;indels=0;unknowns=0;Target=comp102784_c0_seq1 439 1 .;CDS_Target=comp102784_c0_seq1 91 2 .;locus=RLOC_00007153
Chr1	stalkie_big_nohaplotig	exon	36132833	36133271	100	-	.	Parent=comp102784_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	36133181	36133270	.	-	0	Parent=comp102784_c0_seq1.mrna1
Chr1	gffcl	locus	36194792	36198383	.	-	.	ID=RLOC_00007154;geneIDs=FBgn0040298.2.path1;transcripts=FBgn0040298.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36194792	36198383	.	-	.	ID=FBgn0040298.2.mrna1;geneID=FBgn0040298.2.path1;Name=FBgn0040298.2;Dir=sensecoverage=100.0;identity=100.0;matches=1662;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007154
Chr1	stalkie_big_nohaplotig	exon	36194792	36194942	100	-	.	Parent=FBgn0040298.2.mrna1;Target=FBgn0040298.2 1512 1662 +
Chr1	stalkie_big_nohaplotig	exon	36196631	36197004	100	-	.	Parent=FBgn0040298.2.mrna1;Target=FBgn0040298.2 1138 1511 +
Chr1	stalkie_big_nohaplotig	exon	36197067	36197212	100	-	.	Parent=FBgn0040298.2.mrna1;Target=FBgn0040298.2 992 1137 +
Chr1	stalkie_big_nohaplotig	exon	36197268	36197466	100	-	.	Parent=FBgn0040298.2.mrna1;Target=FBgn0040298.2 793 991 +
Chr1	stalkie_big_nohaplotig	exon	36197521	36198183	100	-	.	Parent=FBgn0040298.2.mrna1;Target=FBgn0040298.2 130 792 +
Chr1	stalkie_big_nohaplotig	exon	36198255	36198383	100	-	.	Parent=FBgn0040298.2.mrna1;Target=FBgn0040298.2 1 129 +
Chr1	stalkie_big_nohaplotig	CDS	36194792	36194942	.	-	1	Parent=FBgn0040298.2.mrna1;Target=FBgn0040298.2 1512 1662 +
Chr1	stalkie_big_nohaplotig	CDS	36196631	36197004	.	-	0	Parent=FBgn0040298.2.mrna1;Target=FBgn0040298.2 1138 1511 +
Chr1	stalkie_big_nohaplotig	CDS	36197067	36197212	.	-	2	Parent=FBgn0040298.2.mrna1;Target=FBgn0040298.2 992 1137 +
Chr1	stalkie_big_nohaplotig	CDS	36197268	36197466	.	-	0	Parent=FBgn0040298.2.mrna1;Target=FBgn0040298.2 793 991 +
Chr1	stalkie_big_nohaplotig	CDS	36197521	36198183	.	-	0	Parent=FBgn0040298.2.mrna1;Target=FBgn0040298.2 130 792 +
Chr1	stalkie_big_nohaplotig	CDS	36198255	36198383	.	-	0	Parent=FBgn0040298.2.mrna1;Target=FBgn0040298.2 1 129 +
Chr1	gffcl	locus	36204688	36205264	.	-	.	ID=RLOC_00007156;geneIDs=FBgn0010333.1.path1;transcripts=FBgn0010333.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36204688	36205264	.	-	.	ID=FBgn0010333.1.mrna1;geneID=FBgn0010333.1.path1;Name=FBgn0010333.1;Dir=indeterminatecoverage=97.6;identity=93.8;matches=541;mismatches=36;indels=0;unknowns=0;Target=FBgn0010333.1 591 15 .;CDS_Target=FBgn0010333.1 591 16 .;locus=RLOC_00007156
Chr1	stalkie_big_nohaplotig	exon	36204688	36205264	93	-	.	Parent=FBgn0010333.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	36204688	36205263	.	-	0	Parent=FBgn0010333.1.mrna1
Chr1	gffcl	locus	36207282	36208430	.	+	.	ID=RLOC_00007157;geneIDs=FBgn0036908.1.path1;transcripts=FBgn0036908.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36207282	36208430	.	+	.	ID=FBgn0036908.1.mrna1;geneID=FBgn0036908.1.path1;Name=FBgn0036908.1;Dir=sensecoverage=100.0;identity=99.1;matches=972;mismatches=9;indels=0;unknowns=0;locus=RLOC_00007157
Chr1	stalkie_big_nohaplotig	exon	36207282	36207897	99	+	.	Parent=FBgn0036908.1.mrna1;Target=FBgn0036908.1 1 616 +
Chr1	stalkie_big_nohaplotig	exon	36207959	36208098	99	+	.	Parent=FBgn0036908.1.mrna1;Target=FBgn0036908.1 617 756 +
Chr1	stalkie_big_nohaplotig	exon	36208148	36208253	99	+	.	Parent=FBgn0036908.1.mrna1;Target=FBgn0036908.1 757 862 +
Chr1	stalkie_big_nohaplotig	exon	36208312	36208430	99	+	.	Parent=FBgn0036908.1.mrna1;Target=FBgn0036908.1 863 981 +
Chr1	stalkie_big_nohaplotig	CDS	36207282	36207897	.	+	0	Parent=FBgn0036908.1.mrna1;Target=FBgn0036908.1 1 616 +
Chr1	stalkie_big_nohaplotig	CDS	36207959	36208098	.	+	2	Parent=FBgn0036908.1.mrna1;Target=FBgn0036908.1 617 756 +
Chr1	stalkie_big_nohaplotig	CDS	36208148	36208253	.	+	0	Parent=FBgn0036908.1.mrna1;Target=FBgn0036908.1 757 862 +
Chr1	stalkie_big_nohaplotig	CDS	36208312	36208430	.	+	2	Parent=FBgn0036908.1.mrna1;Target=FBgn0036908.1 863 981 +
Chr1	gffcl	locus	36209736	36211481	.	-	.	ID=RLOC_00007158;geneIDs=FBgn0022959.1.path1;transcripts=FBgn0022959.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36209736	36211481	.	-	.	ID=FBgn0022959.1.mrna1;geneID=FBgn0022959.1.path1;Name=FBgn0022959.1;Dir=sensecoverage=100.0;identity=100.0;matches=873;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007158
Chr1	stalkie_big_nohaplotig	exon	36209736	36209833	100	-	.	Parent=FBgn0022959.1.mrna1;Target=FBgn0022959.1 776 873 +
Chr1	stalkie_big_nohaplotig	exon	36210232	36210858	100	-	.	Parent=FBgn0022959.1.mrna1;Target=FBgn0022959.1 149 775 +
Chr1	stalkie_big_nohaplotig	exon	36211334	36211481	100	-	.	Parent=FBgn0022959.1.mrna1;Target=FBgn0022959.1 1 148 +
Chr1	stalkie_big_nohaplotig	CDS	36209736	36209833	.	-	2	Parent=FBgn0022959.1.mrna1;Target=FBgn0022959.1 776 873 +
Chr1	stalkie_big_nohaplotig	CDS	36210232	36210858	.	-	2	Parent=FBgn0022959.1.mrna1;Target=FBgn0022959.1 149 775 +
Chr1	stalkie_big_nohaplotig	CDS	36211334	36211481	.	-	0	Parent=FBgn0022959.1.mrna1;Target=FBgn0022959.1 1 148 +
Chr1	gffcl	locus	36213926	36218198	.	+	.	ID=RLOC_00007159;geneIDs=FBgn0261283.1.path1;transcripts=FBgn0261283.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36213926	36218198	.	+	.	ID=FBgn0261283.1.mrna1;geneID=FBgn0261283.1.path1;Name=FBgn0261283.1;Dir=sensecoverage=100.0;identity=99.4;matches=3581;mismatches=22;indels=0;unknowns=0;locus=RLOC_00007159
Chr1	stalkie_big_nohaplotig	exon	36213926	36214055	99	+	.	Parent=FBgn0261283.1.mrna1;Target=FBgn0261283.1 1 130 +
Chr1	stalkie_big_nohaplotig	exon	36214117	36214868	99	+	.	Parent=FBgn0261283.1.mrna1;Target=FBgn0261283.1 131 882 +
Chr1	stalkie_big_nohaplotig	exon	36214928	36215804	99	+	.	Parent=FBgn0261283.1.mrna1;Target=FBgn0261283.1 883 1759 +
Chr1	stalkie_big_nohaplotig	exon	36215861	36216051	100	+	.	Parent=FBgn0261283.1.mrna1;Target=FBgn0261283.1 1760 1950 +
Chr1	stalkie_big_nohaplotig	exon	36216111	36216725	99	+	.	Parent=FBgn0261283.1.mrna1;Target=FBgn0261283.1 1951 2565 +
Chr1	stalkie_big_nohaplotig	exon	36216789	36217177	99	+	.	Parent=FBgn0261283.1.mrna1;Target=FBgn0261283.1 2566 2954 +
Chr1	stalkie_big_nohaplotig	exon	36217242	36217365	100	+	.	Parent=FBgn0261283.1.mrna1;Target=FBgn0261283.1 2955 3078 +
Chr1	stalkie_big_nohaplotig	exon	36217611	36217778	100	+	.	Parent=FBgn0261283.1.mrna1;Target=FBgn0261283.1 3079 3246 +
Chr1	stalkie_big_nohaplotig	exon	36217842	36218198	99	+	.	Parent=FBgn0261283.1.mrna1;Target=FBgn0261283.1 3247 3603 +
Chr1	stalkie_big_nohaplotig	CDS	36213926	36214055	.	+	0	Parent=FBgn0261283.1.mrna1;Target=FBgn0261283.1 1 130 +
Chr1	stalkie_big_nohaplotig	CDS	36214117	36214868	.	+	2	Parent=FBgn0261283.1.mrna1;Target=FBgn0261283.1 131 882 +
Chr1	stalkie_big_nohaplotig	CDS	36214928	36215804	.	+	0	Parent=FBgn0261283.1.mrna1;Target=FBgn0261283.1 883 1759 +
Chr1	stalkie_big_nohaplotig	CDS	36215861	36216051	.	+	2	Parent=FBgn0261283.1.mrna1;Target=FBgn0261283.1 1760 1950 +
Chr1	stalkie_big_nohaplotig	CDS	36216111	36216725	.	+	0	Parent=FBgn0261283.1.mrna1;Target=FBgn0261283.1 1951 2565 +
Chr1	stalkie_big_nohaplotig	CDS	36216789	36217177	.	+	0	Parent=FBgn0261283.1.mrna1;Target=FBgn0261283.1 2566 2954 +
Chr1	stalkie_big_nohaplotig	CDS	36217242	36217365	.	+	1	Parent=FBgn0261283.1.mrna1;Target=FBgn0261283.1 2955 3078 +
Chr1	stalkie_big_nohaplotig	CDS	36217611	36217778	.	+	0	Parent=FBgn0261283.1.mrna1;Target=FBgn0261283.1 3079 3246 +
Chr1	stalkie_big_nohaplotig	CDS	36217842	36218198	.	+	0	Parent=FBgn0261283.1.mrna1;Target=FBgn0261283.1 3247 3603 +
Chr1	gffcl	locus	36221345	36221695	.	+	.	ID=RLOC_00007160;geneIDs=FBgn0036909.1.path1;transcripts=FBgn0036909.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36221345	36221695	.	+	.	ID=FBgn0036909.1.mrna1;geneID=FBgn0036909.1.path1;Name=FBgn0036909.1;Dir=sensecoverage=100.0;identity=99.7;matches=287;mismatches=0;indels=1;unknowns=0;Target=FBgn0036909.1 3 20 +;locus=RLOC_00007160
Chr1	stalkie_big_nohaplotig	exon	36221345	36221526	99	+	.	Parent=FBgn0036909.1.mrna1;Target=FBgn0036909.1 1 183 +
Chr1	stalkie_big_nohaplotig	exon	36221591	36221695	100	+	.	Parent=FBgn0036909.1.mrna1;Target=FBgn0036909.1 184 288 +
Chr1	stalkie_big_nohaplotig	CDS	36221347	36221363	.	+	0	Parent=FBgn0036909.1.mrna1
Chr1	gffcl	locus	36222311	36224367	.	+	.	ID=RLOC_00007161;geneIDs=FBgn0024889.1.path1;transcripts=FBgn0024889.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36222311	36224367	.	+	.	ID=FBgn0024889.1.mrna1;geneID=FBgn0024889.1.path1;Name=FBgn0024889.1;Dir=sensecoverage=100.0;identity=100.0;matches=1638;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007161
Chr1	stalkie_big_nohaplotig	exon	36222311	36222505	100	+	.	Parent=FBgn0024889.1.mrna1;Target=FBgn0024889.1 1 195 +
Chr1	stalkie_big_nohaplotig	exon	36222564	36222839	100	+	.	Parent=FBgn0024889.1.mrna1;Target=FBgn0024889.1 196 471 +
Chr1	stalkie_big_nohaplotig	exon	36222900	36223120	100	+	.	Parent=FBgn0024889.1.mrna1;Target=FBgn0024889.1 472 692 +
Chr1	stalkie_big_nohaplotig	exon	36223209	36223472	100	+	.	Parent=FBgn0024889.1.mrna1;Target=FBgn0024889.1 693 956 +
Chr1	stalkie_big_nohaplotig	exon	36223533	36223872	100	+	.	Parent=FBgn0024889.1.mrna1;Target=FBgn0024889.1 957 1296 +
Chr1	stalkie_big_nohaplotig	exon	36223931	36224090	100	+	.	Parent=FBgn0024889.1.mrna1;Target=FBgn0024889.1 1297 1456 +
Chr1	stalkie_big_nohaplotig	exon	36224186	36224367	100	+	.	Parent=FBgn0024889.1.mrna1;Target=FBgn0024889.1 1457 1638 +
Chr1	stalkie_big_nohaplotig	CDS	36222311	36222505	.	+	0	Parent=FBgn0024889.1.mrna1;Target=FBgn0024889.1 1 195 +
Chr1	stalkie_big_nohaplotig	CDS	36222564	36222839	.	+	0	Parent=FBgn0024889.1.mrna1;Target=FBgn0024889.1 196 471 +
Chr1	stalkie_big_nohaplotig	CDS	36222900	36223120	.	+	0	Parent=FBgn0024889.1.mrna1;Target=FBgn0024889.1 472 692 +
Chr1	stalkie_big_nohaplotig	CDS	36223209	36223472	.	+	1	Parent=FBgn0024889.1.mrna1;Target=FBgn0024889.1 693 956 +
Chr1	stalkie_big_nohaplotig	CDS	36223533	36223872	.	+	1	Parent=FBgn0024889.1.mrna1;Target=FBgn0024889.1 957 1296 +
Chr1	stalkie_big_nohaplotig	CDS	36223931	36224090	.	+	0	Parent=FBgn0024889.1.mrna1;Target=FBgn0024889.1 1297 1456 +
Chr1	stalkie_big_nohaplotig	CDS	36224186	36224367	.	+	2	Parent=FBgn0024889.1.mrna1;Target=FBgn0024889.1 1457 1638 +
Chr1	gffcl	locus	36225174	36226496	.	-	.	ID=RLOC_00007162;geneIDs=FBgn0036889.1.path1;transcripts=FBgn0036889.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36225174	36226496	.	-	.	ID=FBgn0036889.1.mrna1;geneID=FBgn0036889.1.path1;Name=FBgn0036889.1;Dir=sensecoverage=100.0;identity=99.5;matches=1263;mismatches=3;indels=3;unknowns=0;locus=RLOC_00007162
Chr1	stalkie_big_nohaplotig	exon	36225174	36225324	100	-	.	Parent=FBgn0036889.1.mrna1;Target=FBgn0036889.1 1119 1269 +
Chr1	stalkie_big_nohaplotig	exon	36225382	36226496	99	-	.	Parent=FBgn0036889.1.mrna1;Target=FBgn0036889.1 1 1118 +
Chr1	stalkie_big_nohaplotig	CDS	36225174	36225324	.	-	1	Parent=FBgn0036889.1.mrna1;Target=FBgn0036889.1 1119 1269 +
Chr1	stalkie_big_nohaplotig	CDS	36225382	36226496	.	-	0	Parent=FBgn0036889.1.mrna1;Target=FBgn0036889.1 1 1118 +
Chr1	gffcl	locus	36227374	36229519	.	+	.	ID=RLOC_00007163;geneIDs=FBgn0036887.1.path1,comp149277_c0_seq1.path1;transcripts=FBgn0036887.1.mrna1,comp149277_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36227374	36229519	.	+	.	ID=FBgn0036887.1.mrna1;geneID=FBgn0036887.1.path1;Name=FBgn0036887.1;Dir=sensecoverage=100.0;identity=99.8;matches=437;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007163
Chr1	stalkie_big_nohaplotig	exon	36227374	36227615	100	+	.	Parent=FBgn0036887.1.mrna1;Target=FBgn0036887.1 1 242 +
Chr1	stalkie_big_nohaplotig	exon	36229324	36229519	99	+	.	Parent=FBgn0036887.1.mrna1;Target=FBgn0036887.1 243 438 +
Chr1	stalkie_big_nohaplotig	CDS	36227374	36227615	.	+	0	Parent=FBgn0036887.1.mrna1;Target=FBgn0036887.1 1 242 +
Chr1	stalkie_big_nohaplotig	CDS	36229324	36229519	.	+	1	Parent=FBgn0036887.1.mrna1;Target=FBgn0036887.1 243 438 +
Chr1	stalkie_big_nohaplotig	mRNA	36228823	36229345	.	+	.	ID=comp149277_c0_seq1.mrna1;geneID=comp149277_c0_seq1.path1;Name=comp149277_c0_seq1;Dir=antisensecoverage=99.8;identity=99.8;matches=456;mismatches=1;indels=0;unknowns=0;Target=comp149277_c0_seq1 189 251 .;locus=RLOC_00007163
Chr1	stalkie_big_nohaplotig	exon	36228823	36229257	99	+	.	Parent=comp149277_c0_seq1.mrna1;Target=comp149277_c0_seq1 23 457 -
Chr1	stalkie_big_nohaplotig	exon	36229324	36229345	100	+	.	Parent=comp149277_c0_seq1.mrna1;Target=comp149277_c0_seq1 1 22 -
Chr1	stalkie_big_nohaplotig	CDS	36229029	36229091	.	+	0	Parent=comp149277_c0_seq1.mrna1
Chr1	gffcl	locus	36253417	36260211	.	+	.	ID=RLOC_00007164;geneIDs=FBgn0020389.1.path2;transcripts=FBgn0020389.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	36253417	36260211	.	+	.	ID=FBgn0020389.1.mrna2;geneID=FBgn0020389.1.path2;Name=FBgn0020389.1;Dir=sensecoverage=97.0;identity=99.6;matches=1832;mismatches=7;indels=0;unknowns=0;locus=RLOC_00007164
Chr1	stalkie_big_nohaplotig	exon	36253417	36253531	100	+	.	Parent=FBgn0020389.1.mrna2;Target=FBgn0020389.1 58 172 +
Chr1	stalkie_big_nohaplotig	exon	36253689	36254218	99	+	.	Parent=FBgn0020389.1.mrna2;Target=FBgn0020389.1 173 702 +
Chr1	stalkie_big_nohaplotig	exon	36254295	36254568	98	+	.	Parent=FBgn0020389.1.mrna2;Target=FBgn0020389.1 703 976 +
Chr1	stalkie_big_nohaplotig	exon	36254630	36254922	99	+	.	Parent=FBgn0020389.1.mrna2;Target=FBgn0020389.1 977 1269 +
Chr1	stalkie_big_nohaplotig	exon	36259473	36259743	100	+	.	Parent=FBgn0020389.1.mrna2;Target=FBgn0020389.1 1270 1540 +
Chr1	stalkie_big_nohaplotig	exon	36259803	36259954	100	+	.	Parent=FBgn0020389.1.mrna2;Target=FBgn0020389.1 1541 1692 +
Chr1	stalkie_big_nohaplotig	exon	36260008	36260211	100	+	.	Parent=FBgn0020389.1.mrna2;Target=FBgn0020389.1 1693 1896 +
Chr1	stalkie_big_nohaplotig	CDS	36253417	36253531	.	+	0	Parent=FBgn0020389.1.mrna2;Target=FBgn0020389.1 58 172 +
Chr1	stalkie_big_nohaplotig	CDS	36253689	36254218	.	+	2	Parent=FBgn0020389.1.mrna2;Target=FBgn0020389.1 173 702 +
Chr1	stalkie_big_nohaplotig	CDS	36254295	36254568	.	+	0	Parent=FBgn0020389.1.mrna2;Target=FBgn0020389.1 703 976 +
Chr1	stalkie_big_nohaplotig	CDS	36254630	36254922	.	+	2	Parent=FBgn0020389.1.mrna2;Target=FBgn0020389.1 977 1269 +
Chr1	stalkie_big_nohaplotig	CDS	36259473	36259743	.	+	0	Parent=FBgn0020389.1.mrna2;Target=FBgn0020389.1 1270 1540 +
Chr1	stalkie_big_nohaplotig	CDS	36259803	36259954	.	+	2	Parent=FBgn0020389.1.mrna2;Target=FBgn0020389.1 1541 1692 +
Chr1	stalkie_big_nohaplotig	CDS	36260008	36260211	.	+	0	Parent=FBgn0020389.1.mrna2;Target=FBgn0020389.1 1693 1896 +
Chr1	gffcl	locus	36254965	36255901	.	-	.	ID=RLOC_00007165;geneIDs=comp151106_c1_seq1.path2;transcripts=comp151106_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	36254965	36255901	.	-	.	ID=comp151106_c1_seq1.mrna2;geneID=comp151106_c1_seq1.path2;Name=comp151106_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=936;mismatches=1;indels=0;unknowns=0;Target=comp151106_c1_seq1 937 1 .;CDS_Target=comp151106_c1_seq1 242 3 .;locus=RLOC_00007165
Chr1	stalkie_big_nohaplotig	exon	36254965	36255901	99	-	.	Parent=comp151106_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	36255660	36255899	.	-	0	Parent=comp151106_c1_seq1.mrna2
Chr1	gffcl	locus	36261809	36261870	.	+	.	ID=RLOC_00007166;geneIDs=comp142736_c0_seq1.path1;transcripts=comp142736_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36261809	36261870	.	+	.	ID=comp142736_c0_seq1.mrna1;geneID=comp142736_c0_seq1.path1;Name=comp142736_c0_seq1;Dir=indeterminatecoverage=7.3;identity=100.0;matches=62;mismatches=0;indels=0;unknowns=0;Target=comp142736_c0_seq1 62 1 .;locus=RLOC_00007166
Chr1	stalkie_big_nohaplotig	exon	36261809	36261870	100	+	.	Parent=comp142736_c0_seq1.mrna1
Chr1	gffcl	locus	36262642	37760039	.	+	.	ID=RLOC_00007167;geneIDs=comp153022_c1_seq2.path1;transcripts=comp153022_c1_seq2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36262642	37760039	.	+	.	ID=comp153022_c1_seq2.mrna1;geneID=comp153022_c1_seq2.path1;Name=comp153022_c1_seq2;Dir=indeterminatecoverage=87.3;identity=99.8;matches=646;mismatches=0;indels=1;unknowns=0;Target=comp153022_c1_seq2 121 5 .;locus=RLOC_00007167
Chr1	stalkie_big_nohaplotig	exon	36262642	36263110	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 472 4 .
Chr1	stalkie_big_nohaplotig	exon	37634956	37634960	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 477 473 .
Chr1	stalkie_big_nohaplotig	exon	37647578	37647585	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 485 478 .
Chr1	stalkie_big_nohaplotig	exon	37659269	37659274	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 491 486 .
Chr1	stalkie_big_nohaplotig	exon	37661497	37661504	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 499 492 .
Chr1	stalkie_big_nohaplotig	exon	37661528	37661530	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 540 538 .
Chr1	stalkie_big_nohaplotig	exon	37672225	37672236	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 552 541 .
Chr1	stalkie_big_nohaplotig	exon	37672268	37672269	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 577 576 .
Chr1	stalkie_big_nohaplotig	exon	37673058	37673060	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 580 578 .
Chr1	stalkie_big_nohaplotig	exon	37673294	37673301	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 588 581 .
Chr1	stalkie_big_nohaplotig	exon	37674528	37674534	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 595 589 .
Chr1	stalkie_big_nohaplotig	exon	37677317	37677320	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 599 596 .
Chr1	stalkie_big_nohaplotig	exon	37685212	37685215	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 603 600 .
Chr1	stalkie_big_nohaplotig	exon	37690204	37690209	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 609 604 .
Chr1	stalkie_big_nohaplotig	exon	37696386	37696388	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 612 610 .
Chr1	stalkie_big_nohaplotig	exon	37699518	37699522	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 617 613 .
Chr1	stalkie_big_nohaplotig	exon	37709060	37709062	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 620 618 .
Chr1	stalkie_big_nohaplotig	exon	37710969	37710972	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 624 621 .
Chr1	stalkie_big_nohaplotig	exon	37713598	37713604	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 631 625 .
Chr1	stalkie_big_nohaplotig	exon	37721429	37721432	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 635 632 .
Chr1	stalkie_big_nohaplotig	exon	37725747	37725752	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 641 636 .
Chr1	stalkie_big_nohaplotig	exon	37726477	37726480	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 645 642 .
Chr1	stalkie_big_nohaplotig	exon	37727929	37727932	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 649 646 .
Chr1	stalkie_big_nohaplotig	exon	37729631	37729647	94	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 665 650 .
Chr1	stalkie_big_nohaplotig	exon	37730398	37730403	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 679 674 .
Chr1	stalkie_big_nohaplotig	exon	37736134	37736143	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 689 680 .
Chr1	stalkie_big_nohaplotig	exon	37738339	37738345	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 696 690 .
Chr1	stalkie_big_nohaplotig	exon	37740232	37740234	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 699 697 .
Chr1	stalkie_big_nohaplotig	exon	37745972	37745977	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 705 700 .
Chr1	stalkie_big_nohaplotig	exon	37752599	37752608	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 715 706 .
Chr1	stalkie_big_nohaplotig	exon	37760038	37760039	100	+	.	Parent=comp153022_c1_seq2.mrna1;Target=comp153022_c1_seq2 717 716 .
Chr1	stalkie_big_nohaplotig	CDS	36262643	36262759	.	+	0	Parent=comp153022_c1_seq2.mrna1
Chr1	gffcl	locus	36263736	36274355	.	-	.	ID=RLOC_00007168;geneIDs=FBgn0262518.1.path1;transcripts=FBgn0262518.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36263736	36274355	.	-	.	ID=FBgn0262518.1.mrna1;geneID=FBgn0262518.1.path1;Name=FBgn0262518.1;Dir=sensecoverage=100.0;identity=100.0;matches=633;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007168
Chr1	stalkie_big_nohaplotig	exon	36263736	36263825	100	-	.	Parent=FBgn0262518.1.mrna1;Target=FBgn0262518.1 544 633 +
Chr1	stalkie_big_nohaplotig	exon	36263896	36264036	100	-	.	Parent=FBgn0262518.1.mrna1;Target=FBgn0262518.1 403 543 +
Chr1	stalkie_big_nohaplotig	exon	36273258	36273462	100	-	.	Parent=FBgn0262518.1.mrna1;Target=FBgn0262518.1 198 402 +
Chr1	stalkie_big_nohaplotig	exon	36273520	36273580	100	-	.	Parent=FBgn0262518.1.mrna1;Target=FBgn0262518.1 137 197 +
Chr1	stalkie_big_nohaplotig	exon	36274220	36274355	100	-	.	Parent=FBgn0262518.1.mrna1;Target=FBgn0262518.1 1 136 +
Chr1	stalkie_big_nohaplotig	CDS	36263736	36263825	.	-	0	Parent=FBgn0262518.1.mrna1;Target=FBgn0262518.1 544 633 +
Chr1	stalkie_big_nohaplotig	CDS	36263896	36264036	.	-	0	Parent=FBgn0262518.1.mrna1;Target=FBgn0262518.1 403 543 +
Chr1	stalkie_big_nohaplotig	CDS	36273258	36273462	.	-	1	Parent=FBgn0262518.1.mrna1;Target=FBgn0262518.1 198 402 +
Chr1	stalkie_big_nohaplotig	CDS	36273520	36273580	.	-	2	Parent=FBgn0262518.1.mrna1;Target=FBgn0262518.1 137 197 +
Chr1	stalkie_big_nohaplotig	CDS	36274220	36274355	.	-	0	Parent=FBgn0262518.1.mrna1;Target=FBgn0262518.1 1 136 +
Chr1	gffcl	locus	36277439	36286705	.	+	.	ID=RLOC_00007169;geneIDs=FBgn0036913.1.path1;transcripts=FBgn0036913.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36277439	36286705	.	+	.	ID=FBgn0036913.1.mrna1;geneID=FBgn0036913.1.path1;Name=FBgn0036913.1;Dir=sensecoverage=100.0;identity=99.8;matches=5439;mismatches=12;indels=0;unknowns=0;locus=RLOC_00007169
Chr1	stalkie_big_nohaplotig	exon	36277439	36277499	100	+	.	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 1 61 +
Chr1	stalkie_big_nohaplotig	exon	36278607	36278841	100	+	.	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 62 296 +
Chr1	stalkie_big_nohaplotig	exon	36278904	36279183	100	+	.	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 297 576 +
Chr1	stalkie_big_nohaplotig	exon	36279249	36279477	100	+	.	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 577 805 +
Chr1	stalkie_big_nohaplotig	exon	36279537	36279754	99	+	.	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 806 1023 +
Chr1	stalkie_big_nohaplotig	exon	36279821	36279971	100	+	.	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 1024 1174 +
Chr1	stalkie_big_nohaplotig	exon	36280185	36280448	100	+	.	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 1175 1438 +
Chr1	stalkie_big_nohaplotig	exon	36280508	36280743	100	+	.	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 1439 1674 +
Chr1	stalkie_big_nohaplotig	exon	36280810	36280930	100	+	.	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 1675 1795 +
Chr1	stalkie_big_nohaplotig	exon	36280977	36281972	100	+	.	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 1796 2791 +
Chr1	stalkie_big_nohaplotig	exon	36282032	36282337	100	+	.	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 2792 3097 +
Chr1	stalkie_big_nohaplotig	exon	36282401	36282648	100	+	.	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 3098 3345 +
Chr1	stalkie_big_nohaplotig	exon	36284045	36284709	99	+	.	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 3346 4010 +
Chr1	stalkie_big_nohaplotig	exon	36284851	36285017	100	+	.	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 4011 4177 +
Chr1	stalkie_big_nohaplotig	exon	36285083	36285279	98	+	.	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 4178 4374 +
Chr1	stalkie_big_nohaplotig	exon	36285503	36285688	100	+	.	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 4375 4560 +
Chr1	stalkie_big_nohaplotig	exon	36285747	36286364	99	+	.	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 4561 5178 +
Chr1	stalkie_big_nohaplotig	exon	36286433	36286705	99	+	.	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 5179 5451 +
Chr1	stalkie_big_nohaplotig	CDS	36277439	36277499	.	+	0	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 1 61 +
Chr1	stalkie_big_nohaplotig	CDS	36278607	36278841	.	+	2	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 62 296 +
Chr1	stalkie_big_nohaplotig	CDS	36278904	36279183	.	+	1	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 297 576 +
Chr1	stalkie_big_nohaplotig	CDS	36279249	36279477	.	+	0	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 577 805 +
Chr1	stalkie_big_nohaplotig	CDS	36279537	36279754	.	+	2	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 806 1023 +
Chr1	stalkie_big_nohaplotig	CDS	36279821	36279971	.	+	0	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 1024 1174 +
Chr1	stalkie_big_nohaplotig	CDS	36280185	36280448	.	+	2	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 1175 1438 +
Chr1	stalkie_big_nohaplotig	CDS	36280508	36280743	.	+	2	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 1439 1674 +
Chr1	stalkie_big_nohaplotig	CDS	36280810	36280930	.	+	0	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 1675 1795 +
Chr1	stalkie_big_nohaplotig	CDS	36280977	36281972	.	+	2	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 1796 2791 +
Chr1	stalkie_big_nohaplotig	CDS	36282032	36282337	.	+	2	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 2792 3097 +
Chr1	stalkie_big_nohaplotig	CDS	36282401	36282648	.	+	2	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 3098 3345 +
Chr1	stalkie_big_nohaplotig	CDS	36284045	36284709	.	+	0	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 3346 4010 +
Chr1	stalkie_big_nohaplotig	CDS	36284851	36285017	.	+	1	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 4011 4177 +
Chr1	stalkie_big_nohaplotig	CDS	36285083	36285279	.	+	2	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 4178 4374 +
Chr1	stalkie_big_nohaplotig	CDS	36285503	36285688	.	+	0	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 4375 4560 +
Chr1	stalkie_big_nohaplotig	CDS	36285747	36286364	.	+	0	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 4561 5178 +
Chr1	stalkie_big_nohaplotig	CDS	36286433	36286705	.	+	0	Parent=FBgn0036913.1.mrna1;Target=FBgn0036913.1 5179 5451 +
Chr1	gffcl	locus	36287593	36297201	.	-	.	ID=RLOC_00007170;geneIDs=FBgn0262517.1.path1;transcripts=FBgn0262517.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36287593	36297201	.	-	.	ID=FBgn0262517.1.mrna1;geneID=FBgn0262517.1.path1;Name=FBgn0262517.1;Dir=sensecoverage=100.0;identity=99.4;matches=3797;mismatches=7;indels=17;unknowns=0;Target=FBgn0262517.1 3 47 +;locus=RLOC_00007170
Chr1	stalkie_big_nohaplotig	exon	36287593	36287649	100	-	.	Parent=FBgn0262517.1.mrna1;Target=FBgn0262517.1 3757 3813 +
Chr1	stalkie_big_nohaplotig	exon	36290035	36290202	100	-	.	Parent=FBgn0262517.1.mrna1;Target=FBgn0262517.1 3589 3756 +
Chr1	stalkie_big_nohaplotig	exon	36290267	36290458	100	-	.	Parent=FBgn0262517.1.mrna1;Target=FBgn0262517.1 3397 3588 +
Chr1	stalkie_big_nohaplotig	exon	36291418	36291629	100	-	.	Parent=FBgn0262517.1.mrna1;Target=FBgn0262517.1 3185 3396 +
Chr1	stalkie_big_nohaplotig	exon	36292928	36293042	100	-	.	Parent=FBgn0262517.1.mrna1;Target=FBgn0262517.1 3070 3184 +
Chr1	stalkie_big_nohaplotig	exon	36293128	36293287	100	-	.	Parent=FBgn0262517.1.mrna1;Target=FBgn0262517.1 2910 3069 +
Chr1	stalkie_big_nohaplotig	exon	36293812	36294083	100	-	.	Parent=FBgn0262517.1.mrna1;Target=FBgn0262517.1 2638 2909 +
Chr1	stalkie_big_nohaplotig	exon	36294157	36294245	100	-	.	Parent=FBgn0262517.1.mrna1;Target=FBgn0262517.1 2549 2637 +
Chr1	stalkie_big_nohaplotig	exon	36294311	36294500	100	-	.	Parent=FBgn0262517.1.mrna1;Target=FBgn0262517.1 2359 2548 +
Chr1	stalkie_big_nohaplotig	exon	36294553	36294736	100	-	.	Parent=FBgn0262517.1.mrna1;Target=FBgn0262517.1 2175 2358 +
Chr1	stalkie_big_nohaplotig	exon	36294818	36295050	100	-	.	Parent=FBgn0262517.1.mrna1;Target=FBgn0262517.1 1942 2174 +
Chr1	stalkie_big_nohaplotig	exon	36295114	36295389	100	-	.	Parent=FBgn0262517.1.mrna1;Target=FBgn0262517.1 1666 1941 +
Chr1	stalkie_big_nohaplotig	exon	36295448	36296479	99	-	.	Parent=FBgn0262517.1.mrna1;Target=FBgn0262517.1 634 1665 +
Chr1	stalkie_big_nohaplotig	exon	36296570	36297201	96	-	.	Parent=FBgn0262517.1.mrna1;Target=FBgn0262517.1 1 633 +
Chr1	stalkie_big_nohaplotig	CDS	36297156	36297199	.	-	0	Parent=FBgn0262517.1.mrna1
Chr1	gffcl	locus	36291727	36292909	.	+	.	ID=RLOC_00007171;geneIDs=FBgn0260461.1.path1;transcripts=FBgn0260461.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36291727	36292909	.	+	.	ID=FBgn0260461.1.mrna1;geneID=FBgn0260461.1.path1;Name=FBgn0260461.1;Dir=sensecoverage=100.0;identity=100.0;matches=1095;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007171
Chr1	stalkie_big_nohaplotig	exon	36291727	36292531	100	+	.	Parent=FBgn0260461.1.mrna1;Target=FBgn0260461.1 1 805 +
Chr1	stalkie_big_nohaplotig	exon	36292620	36292909	100	+	.	Parent=FBgn0260461.1.mrna1;Target=FBgn0260461.1 806 1095 +
Chr1	stalkie_big_nohaplotig	CDS	36291727	36292531	.	+	0	Parent=FBgn0260461.1.mrna1;Target=FBgn0260461.1 1 805 +
Chr1	stalkie_big_nohaplotig	CDS	36292620	36292909	.	+	2	Parent=FBgn0260461.1.mrna1;Target=FBgn0260461.1 806 1095 +
Chr1	gffcl	locus	36299770	36302236	.	+	.	ID=RLOC_00007172;geneIDs=FBgn0036886.1.path1;transcripts=FBgn0036886.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36299770	36302236	.	+	.	ID=FBgn0036886.1.mrna1;geneID=FBgn0036886.1.path1;Name=FBgn0036886.1;Dir=sensecoverage=100.0;identity=99.2;matches=2217;mismatches=18;indels=0;unknowns=0;locus=RLOC_00007172
Chr1	stalkie_big_nohaplotig	exon	36299770	36300018	99	+	.	Parent=FBgn0036886.1.mrna1;Target=FBgn0036886.1 1 249 +
Chr1	stalkie_big_nohaplotig	exon	36300137	36300301	99	+	.	Parent=FBgn0036886.1.mrna1;Target=FBgn0036886.1 250 414 +
Chr1	stalkie_big_nohaplotig	exon	36300356	36300722	99	+	.	Parent=FBgn0036886.1.mrna1;Target=FBgn0036886.1 415 781 +
Chr1	stalkie_big_nohaplotig	exon	36300783	36302236	99	+	.	Parent=FBgn0036886.1.mrna1;Target=FBgn0036886.1 782 2235 +
Chr1	stalkie_big_nohaplotig	CDS	36299770	36300018	.	+	0	Parent=FBgn0036886.1.mrna1;Target=FBgn0036886.1 1 249 +
Chr1	stalkie_big_nohaplotig	CDS	36300137	36300301	.	+	0	Parent=FBgn0036886.1.mrna1;Target=FBgn0036886.1 250 414 +
Chr1	stalkie_big_nohaplotig	CDS	36300356	36300722	.	+	0	Parent=FBgn0036886.1.mrna1;Target=FBgn0036886.1 415 781 +
Chr1	stalkie_big_nohaplotig	CDS	36300783	36302236	.	+	2	Parent=FBgn0036886.1.mrna1;Target=FBgn0036886.1 782 2235 +
Chr1	gffcl	locus	36312028	36312964	.	+	.	ID=RLOC_00007173;geneIDs=comp151106_c1_seq1.path1;transcripts=comp151106_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36312028	36312964	.	+	.	ID=comp151106_c1_seq1.mrna1;geneID=comp151106_c1_seq1.path1;Name=comp151106_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=937;mismatches=0;indels=0;unknowns=0;Target=comp151106_c1_seq1 937 1 .;CDS_Target=comp151106_c1_seq1 242 3 .;locus=RLOC_00007173
Chr1	stalkie_big_nohaplotig	exon	36312028	36312964	100	+	.	Parent=comp151106_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	36312030	36312269	.	+	0	Parent=comp151106_c1_seq1.mrna1
Chr1	gffcl	locus	36330972	36330999	.	-	.	ID=RLOC_00007174;geneIDs=comp161897_c0_seq1.path1;transcripts=comp161897_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36330972	36330999	.	-	.	ID=comp161897_c0_seq1.mrna1;geneID=comp161897_c0_seq1.path1;Name=comp161897_c0_seq1;Dir=indeterminatecoverage=2.4;identity=100.0;matches=28;mismatches=0;indels=0;unknowns=0;Target=comp161897_c0_seq1 28 1 .;locus=RLOC_00007174
Chr1	stalkie_big_nohaplotig	exon	36330972	36330999	100	-	.	Parent=comp161897_c0_seq1.mrna1
Chr1	gffcl	locus	36335995	36336051	.	-	.	ID=RLOC_00007175;geneIDs=FBgn0020389.1.path1;transcripts=FBgn0020389.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36335995	36336051	.	-	.	ID=FBgn0020389.1.mrna1;geneID=FBgn0020389.1.path1;Name=FBgn0020389.1;Dir=indeterminatecoverage=3.0;identity=100.0;matches=57;mismatches=0;indels=0;unknowns=0;Target=FBgn0020389.1 57 1 .;locus=RLOC_00007175
Chr1	stalkie_big_nohaplotig	exon	36335995	36336051	100	-	.	Parent=FBgn0020389.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	36335995	36336051	.	-	0	Parent=FBgn0020389.1.mrna1
Chr1	gffcl	locus	36339427	36344313	.	+	.	ID=RLOC_00007176;geneIDs=FBgn0001324.1.path1;transcripts=FBgn0001324.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36339427	36344313	.	+	.	ID=FBgn0001324.1.mrna1;geneID=FBgn0001324.1.path1;Name=FBgn0001324.1;Dir=sensecoverage=100.0;identity=99.7;matches=4708;mismatches=12;indels=0;unknowns=0;locus=RLOC_00007176
Chr1	stalkie_big_nohaplotig	exon	36339427	36340069	100	+	.	Parent=FBgn0001324.1.mrna1;Target=FBgn0001324.1 1 643 +
Chr1	stalkie_big_nohaplotig	exon	36340124	36341318	99	+	.	Parent=FBgn0001324.1.mrna1;Target=FBgn0001324.1 644 1838 +
Chr1	stalkie_big_nohaplotig	exon	36341382	36342770	99	+	.	Parent=FBgn0001324.1.mrna1;Target=FBgn0001324.1 1839 3227 +
Chr1	stalkie_big_nohaplotig	exon	36342821	36344313	99	+	.	Parent=FBgn0001324.1.mrna1;Target=FBgn0001324.1 3228 4720 +
Chr1	stalkie_big_nohaplotig	CDS	36339427	36340069	.	+	0	Parent=FBgn0001324.1.mrna1;Target=FBgn0001324.1 1 643 +
Chr1	stalkie_big_nohaplotig	CDS	36340124	36341318	.	+	2	Parent=FBgn0001324.1.mrna1;Target=FBgn0001324.1 644 1838 +
Chr1	stalkie_big_nohaplotig	CDS	36341382	36342770	.	+	1	Parent=FBgn0001324.1.mrna1;Target=FBgn0001324.1 1839 3227 +
Chr1	stalkie_big_nohaplotig	CDS	36342821	36344312	.	+	1	Parent=FBgn0001324.1.mrna1;Target=FBgn0001324.1 3228 4719 +
Chr1	gffcl	locus	36351364	36355630	.	+	.	ID=RLOC_00007177;geneIDs=comp120427_c0_seq1.path1,comp142362_c0_seq1.path1;transcripts=comp142362_c0_seq1.mrna1,comp120427_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36351364	36355627	.	+	.	ID=comp142362_c0_seq1.mrna1;geneID=comp142362_c0_seq1.path1;Name=comp142362_c0_seq1;Dir=antisensecoverage=100.0;identity=97.5;matches=675;mismatches=12;indels=5;unknowns=0;Target=comp142362_c0_seq1 595 690 .;locus=RLOC_00007177
Chr1	stalkie_big_nohaplotig	exon	36351364	36352030	97	+	.	Parent=comp142362_c0_seq1.mrna1;Target=comp142362_c0_seq1 21 692 -
Chr1	stalkie_big_nohaplotig	exon	36355608	36355627	100	+	.	Parent=comp142362_c0_seq1.mrna1;Target=comp142362_c0_seq1 1 20 -
Chr1	stalkie_big_nohaplotig	CDS	36351366	36351461	.	+	0	Parent=comp142362_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36352635	36355630	.	+	.	ID=comp120427_c0_seq1.mrna1;geneID=comp120427_c0_seq1.path1;Name=comp120427_c0_seq1;Dir=sensecoverage=100.0;identity=97.5;matches=234;mismatches=6;indels=0;unknowns=0;Target=comp120427_c0_seq1 1 66 +;locus=RLOC_00007177
Chr1	stalkie_big_nohaplotig	exon	36352635	36352851	97	+	.	Parent=comp120427_c0_seq1.mrna1;Target=comp120427_c0_seq1 1 217 +
Chr1	stalkie_big_nohaplotig	exon	36355608	36355630	100	+	.	Parent=comp120427_c0_seq1.mrna1;Target=comp120427_c0_seq1 218 240 +
Chr1	stalkie_big_nohaplotig	CDS	36352635	36352700	.	+	0	Parent=comp120427_c0_seq1.mrna1
Chr1	gffcl	locus	36355674	36358267	.	+	.	ID=RLOC_00007178;geneIDs=FBgn0037138.2.path1;transcripts=FBgn0037138.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36355674	36358267	.	+	.	ID=FBgn0037138.2.mrna1;geneID=FBgn0037138.2.path1;Name=FBgn0037138.2;Dir=sensecoverage=100.0;identity=99.9;matches=1768;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007178
Chr1	stalkie_big_nohaplotig	exon	36355674	36355753	100	+	.	Parent=FBgn0037138.2.mrna1;Target=FBgn0037138.2 1 80 +
Chr1	stalkie_big_nohaplotig	exon	36355811	36356317	100	+	.	Parent=FBgn0037138.2.mrna1;Target=FBgn0037138.2 81 587 +
Chr1	stalkie_big_nohaplotig	exon	36356375	36356546	99	+	.	Parent=FBgn0037138.2.mrna1;Target=FBgn0037138.2 588 759 +
Chr1	stalkie_big_nohaplotig	exon	36357010	36357197	99	+	.	Parent=FBgn0037138.2.mrna1;Target=FBgn0037138.2 760 947 +
Chr1	stalkie_big_nohaplotig	exon	36357252	36357474	100	+	.	Parent=FBgn0037138.2.mrna1;Target=FBgn0037138.2 948 1170 +
Chr1	stalkie_big_nohaplotig	exon	36357532	36357899	100	+	.	Parent=FBgn0037138.2.mrna1;Target=FBgn0037138.2 1171 1538 +
Chr1	stalkie_big_nohaplotig	exon	36357970	36358088	100	+	.	Parent=FBgn0037138.2.mrna1;Target=FBgn0037138.2 1539 1657 +
Chr1	stalkie_big_nohaplotig	exon	36358155	36358267	100	+	.	Parent=FBgn0037138.2.mrna1;Target=FBgn0037138.2 1658 1770 +
Chr1	stalkie_big_nohaplotig	CDS	36355674	36355753	.	+	0	Parent=FBgn0037138.2.mrna1;Target=FBgn0037138.2 1 80 +
Chr1	stalkie_big_nohaplotig	CDS	36355811	36356317	.	+	1	Parent=FBgn0037138.2.mrna1;Target=FBgn0037138.2 81 587 +
Chr1	stalkie_big_nohaplotig	CDS	36356375	36356546	.	+	1	Parent=FBgn0037138.2.mrna1;Target=FBgn0037138.2 588 759 +
Chr1	stalkie_big_nohaplotig	CDS	36357010	36357197	.	+	0	Parent=FBgn0037138.2.mrna1;Target=FBgn0037138.2 760 947 +
Chr1	stalkie_big_nohaplotig	CDS	36357252	36357474	.	+	1	Parent=FBgn0037138.2.mrna1;Target=FBgn0037138.2 948 1170 +
Chr1	stalkie_big_nohaplotig	CDS	36357532	36357899	.	+	0	Parent=FBgn0037138.2.mrna1;Target=FBgn0037138.2 1171 1538 +
Chr1	stalkie_big_nohaplotig	CDS	36357970	36358088	.	+	1	Parent=FBgn0037138.2.mrna1;Target=FBgn0037138.2 1539 1657 +
Chr1	stalkie_big_nohaplotig	CDS	36358155	36358267	.	+	2	Parent=FBgn0037138.2.mrna1;Target=FBgn0037138.2 1658 1770 +
Chr1	gffcl	locus	36363850	36365850	.	+	.	ID=RLOC_00007179;geneIDs=FBgn0037135.1.path1;transcripts=FBgn0037135.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36363850	36365850	.	+	.	ID=FBgn0037135.1.mrna1;geneID=FBgn0037135.1.path1;Name=FBgn0037135.1;Dir=sensecoverage=100.0;identity=99.9;matches=1463;mismatches=0;indels=1;unknowns=0;locus=RLOC_00007179
Chr1	stalkie_big_nohaplotig	exon	36363850	36363955	100	+	.	Parent=FBgn0037135.1.mrna1;Target=FBgn0037135.1 1 106 +
Chr1	stalkie_big_nohaplotig	exon	36364184	36364981	100	+	.	Parent=FBgn0037135.1.mrna1;Target=FBgn0037135.1 107 904 +
Chr1	stalkie_big_nohaplotig	exon	36365042	36365212	100	+	.	Parent=FBgn0037135.1.mrna1;Target=FBgn0037135.1 905 1075 +
Chr1	stalkie_big_nohaplotig	exon	36365402	36365576	100	+	.	Parent=FBgn0037135.1.mrna1;Target=FBgn0037135.1 1076 1250 +
Chr1	stalkie_big_nohaplotig	exon	36365638	36365850	99	+	.	Parent=FBgn0037135.1.mrna1;Target=FBgn0037135.1 1251 1464 +
Chr1	stalkie_big_nohaplotig	CDS	36363850	36363955	.	+	0	Parent=FBgn0037135.1.mrna1;Target=FBgn0037135.1 1 106 +
Chr1	stalkie_big_nohaplotig	CDS	36364184	36364981	.	+	2	Parent=FBgn0037135.1.mrna1;Target=FBgn0037135.1 107 904 +
Chr1	stalkie_big_nohaplotig	CDS	36365042	36365212	.	+	2	Parent=FBgn0037135.1.mrna1;Target=FBgn0037135.1 905 1075 +
Chr1	stalkie_big_nohaplotig	CDS	36365402	36365576	.	+	2	Parent=FBgn0037135.1.mrna1;Target=FBgn0037135.1 1076 1250 +
Chr1	stalkie_big_nohaplotig	CDS	36365638	36365850	.	+	1	Parent=FBgn0037135.1.mrna1;Target=FBgn0037135.1 1251 1464 +
Chr1	gffcl	locus	36365887	36370586	.	-	.	ID=RLOC_00007180;geneIDs=comp110971_c0_seq1.path1;transcripts=comp110971_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36365887	36370586	.	-	.	ID=comp110971_c0_seq1.mrna1;geneID=comp110971_c0_seq1.path1;Name=comp110971_c0_seq1;Dir=indeterminatecoverage=90.9;identity=99.4;matches=307;mismatches=2;indels=0;unknowns=0;Target=comp110971_c0_seq1 339 223 .;locus=RLOC_00007180
Chr1	stalkie_big_nohaplotig	exon	36365887	36366186	99	-	.	Parent=comp110971_c0_seq1.mrna1;Target=comp110971_c0_seq1 340 41 .
Chr1	stalkie_big_nohaplotig	exon	36368650	36368654	100	-	.	Parent=comp110971_c0_seq1.mrna1;Target=comp110971_c0_seq1 40 36 .
Chr1	stalkie_big_nohaplotig	exon	36370583	36370586	100	-	.	Parent=comp110971_c0_seq1.mrna1;Target=comp110971_c0_seq1 35 32 .
Chr1	stalkie_big_nohaplotig	CDS	36365888	36366004	.	-	0	Parent=comp110971_c0_seq1.mrna1
Chr1	gffcl	locus	36367034	36367450	.	-	.	ID=RLOC_00007181;geneIDs=FBgn0052448.1.path1;transcripts=FBgn0052448.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36367034	36367450	.	-	.	ID=FBgn0052448.1.mrna1;geneID=FBgn0052448.1.path1;Name=FBgn0052448.1;Dir=sensecoverage=100.0;identity=100.0;matches=273;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007181
Chr1	stalkie_big_nohaplotig	exon	36367034	36367189	100	-	.	Parent=FBgn0052448.1.mrna1;Target=FBgn0052448.1 118 273 +
Chr1	stalkie_big_nohaplotig	exon	36367254	36367318	100	-	.	Parent=FBgn0052448.1.mrna1;Target=FBgn0052448.1 53 117 +
Chr1	stalkie_big_nohaplotig	exon	36367399	36367450	100	-	.	Parent=FBgn0052448.1.mrna1;Target=FBgn0052448.1 1 52 +
Chr1	stalkie_big_nohaplotig	CDS	36367034	36367189	.	-	0	Parent=FBgn0052448.1.mrna1;Target=FBgn0052448.1 118 273 +
Chr1	stalkie_big_nohaplotig	CDS	36367254	36367318	.	-	2	Parent=FBgn0052448.1.mrna1;Target=FBgn0052448.1 53 117 +
Chr1	stalkie_big_nohaplotig	CDS	36367399	36367450	.	-	0	Parent=FBgn0052448.1.mrna1;Target=FBgn0052448.1 1 52 +
Chr1	gffcl	locus	36409199	36417940	.	+	.	ID=RLOC_00007182;geneIDs=FBgn0036881.path1;transcripts=FBgn0036881.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36409199	36417940	.	+	.	ID=FBgn0036881.mrna1;geneID=FBgn0036881.path1;Name=FBgn0036881;Dir=sensecoverage=100.0;identity=99.3;matches=1353;mismatches=9;indels=0;unknowns=0;locus=RLOC_00007182
Chr1	stalkie_big_nohaplotig	exon	36409199	36409222	100	+	.	Parent=FBgn0036881.mrna1;Target=FBgn0036881 1 24 +
Chr1	stalkie_big_nohaplotig	exon	36416603	36417940	99	+	.	Parent=FBgn0036881.mrna1;Target=FBgn0036881 25 1362 +
Chr1	stalkie_big_nohaplotig	CDS	36409199	36409222	.	+	0	Parent=FBgn0036881.mrna1;Target=FBgn0036881 1 24 +
Chr1	stalkie_big_nohaplotig	CDS	36416603	36417940	.	+	0	Parent=FBgn0036881.mrna1;Target=FBgn0036881 25 1362 +
Chr1	gffcl	locus	36418680	36420883	.	+	.	ID=RLOC_00007183;geneIDs=comp161102_c1_seq1.path1;transcripts=comp161102_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36418680	36420883	.	+	.	ID=comp161102_c1_seq1.mrna1;geneID=comp161102_c1_seq1.path1;Name=comp161102_c1_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=2034;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007183
Chr1	stalkie_big_nohaplotig	exon	36418680	36419978	99	+	.	Parent=comp161102_c1_seq1.mrna1;Target=comp161102_c1_seq1 740 2038 -
Chr1	stalkie_big_nohaplotig	exon	36420079	36420350	100	+	.	Parent=comp161102_c1_seq1.mrna1;Target=comp161102_c1_seq1 468 739 -
Chr1	stalkie_big_nohaplotig	exon	36420417	36420883	99	+	.	Parent=comp161102_c1_seq1.mrna1;Target=comp161102_c1_seq1 1 467 -
Chr1	stalkie_big_nohaplotig	CDS	36418682	36419978	.	+	0	Parent=comp161102_c1_seq1.mrna1;Target=comp161102_c1_seq1 740 2036 .
Chr1	stalkie_big_nohaplotig	CDS	36420079	36420350	.	+	2	Parent=comp161102_c1_seq1.mrna1;Target=comp161102_c1_seq1 468 739 .
Chr1	stalkie_big_nohaplotig	CDS	36420417	36420662	.	+	0	Parent=comp161102_c1_seq1.mrna1;Target=comp161102_c1_seq1 222 467 .
Chr1	gffcl	locus	36425682	36428665	.	-	.	ID=RLOC_00007184;geneIDs=FBgn0011284.1.path1;transcripts=FBgn0011284.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36425682	36428665	.	-	.	ID=FBgn0011284.1.mrna1;geneID=FBgn0011284.1.path1;Name=FBgn0011284.1;Dir=sensecoverage=100.0;identity=99.2;matches=911;mismatches=7;indels=0;unknowns=0;locus=RLOC_00007184
Chr1	stalkie_big_nohaplotig	exon	36425682	36425932	99	-	.	Parent=FBgn0011284.1.mrna1;Target=FBgn0011284.1 668 918 +
Chr1	stalkie_big_nohaplotig	exon	36427477	36427648	99	-	.	Parent=FBgn0011284.1.mrna1;Target=FBgn0011284.1 496 667 +
Chr1	stalkie_big_nohaplotig	exon	36427798	36427895	98	-	.	Parent=FBgn0011284.1.mrna1;Target=FBgn0011284.1 398 495 +
Chr1	stalkie_big_nohaplotig	exon	36427962	36428220	99	-	.	Parent=FBgn0011284.1.mrna1;Target=FBgn0011284.1 139 397 +
Chr1	stalkie_big_nohaplotig	exon	36428528	36428665	97	-	.	Parent=FBgn0011284.1.mrna1;Target=FBgn0011284.1 1 138 +
Chr1	stalkie_big_nohaplotig	CDS	36425682	36425932	.	-	2	Parent=FBgn0011284.1.mrna1;Target=FBgn0011284.1 668 918 +
Chr1	stalkie_big_nohaplotig	CDS	36427477	36427648	.	-	0	Parent=FBgn0011284.1.mrna1;Target=FBgn0011284.1 496 667 +
Chr1	stalkie_big_nohaplotig	CDS	36427798	36427895	.	-	2	Parent=FBgn0011284.1.mrna1;Target=FBgn0011284.1 398 495 +
Chr1	stalkie_big_nohaplotig	CDS	36427962	36428220	.	-	0	Parent=FBgn0011284.1.mrna1;Target=FBgn0011284.1 139 397 +
Chr1	stalkie_big_nohaplotig	CDS	36428528	36428665	.	-	0	Parent=FBgn0011284.1.mrna1;Target=FBgn0011284.1 1 138 +
Chr1	gffcl	locus	36430433	36431345	.	-	.	ID=RLOC_00007185;geneIDs=comp138572_c2_seq1.path1;transcripts=comp138572_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36430433	36431345	.	-	.	ID=comp138572_c2_seq1.mrna1;geneID=comp138572_c2_seq1.path1;Name=comp138572_c2_seq1;Dir=indeterminatecoverage=100.0;identity=89.3;matches=812;mismatches=50;indels=47;unknowns=0;Target=comp138572_c2_seq1 521 417 .;locus=RLOC_00007185
Chr1	stalkie_big_nohaplotig	exon	36430433	36430593	94	-	.	Parent=comp138572_c2_seq1.mrna1;Target=comp138572_c2_seq1 888 728 .
Chr1	stalkie_big_nohaplotig	exon	36430624	36431345	88	-	.	Parent=comp138572_c2_seq1.mrna1;Target=comp138572_c2_seq1 727 1 .
Chr1	stalkie_big_nohaplotig	CDS	36430831	36430934	.	-	0	Parent=comp138572_c2_seq1.mrna1
Chr1	gffcl	locus	36436852	37936173	.	+	.	ID=RLOC_00007186;geneIDs=comp143124_c0_seq1.path1;transcripts=comp143124_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36436852	37936173	.	+	.	ID=comp143124_c0_seq1.mrna1;geneID=comp143124_c0_seq1.path1;Name=comp143124_c0_seq1;Dir=antisensecoverage=75.2;identity=95.2;matches=530;mismatches=15;indels=12;unknowns=0;locus=RLOC_00007186
Chr1	stalkie_big_nohaplotig	exon	36436852	36436854	100	+	.	Parent=comp143124_c0_seq1.mrna1;Target=comp143124_c0_seq1 564 566 -
Chr1	stalkie_big_nohaplotig	exon	36437551	36437569	84	+	.	Parent=comp143124_c0_seq1.mrna1;Target=comp143124_c0_seq1 546 563 -
Chr1	stalkie_big_nohaplotig	exon	36442187	36442195	100	+	.	Parent=comp143124_c0_seq1.mrna1;Target=comp143124_c0_seq1 537 545 -
Chr1	stalkie_big_nohaplotig	exon	36445902	36445903	100	+	.	Parent=comp143124_c0_seq1.mrna1;Target=comp143124_c0_seq1 535 536 -
Chr1	stalkie_big_nohaplotig	exon	36448356	36448364	100	+	.	Parent=comp143124_c0_seq1.mrna1;Target=comp143124_c0_seq1 526 534 -
Chr1	stalkie_big_nohaplotig	exon	36455482	36455489	75	+	.	Parent=comp143124_c0_seq1.mrna1;Target=comp143124_c0_seq1 519 525 -
Chr1	stalkie_big_nohaplotig	exon	36455974	36455976	100	+	.	Parent=comp143124_c0_seq1.mrna1;Target=comp143124_c0_seq1 516 518 -
Chr1	stalkie_big_nohaplotig	exon	36463163	36463170	87	+	.	Parent=comp143124_c0_seq1.mrna1;Target=comp143124_c0_seq1 508 515 -
Chr1	stalkie_big_nohaplotig	exon	36477136	36477142	100	+	.	Parent=comp143124_c0_seq1.mrna1;Target=comp143124_c0_seq1 501 507 -
Chr1	stalkie_big_nohaplotig	exon	36483454	36483456	100	+	.	Parent=comp143124_c0_seq1.mrna1;Target=comp143124_c0_seq1 498 500 -
Chr1	stalkie_big_nohaplotig	exon	36496616	36496618	100	+	.	Parent=comp143124_c0_seq1.mrna1;Target=comp143124_c0_seq1 495 497 -
Chr1	stalkie_big_nohaplotig	exon	36500172	36500173	100	+	.	Parent=comp143124_c0_seq1.mrna1;Target=comp143124_c0_seq1 493 494 -
Chr1	stalkie_big_nohaplotig	exon	36507534	36507538	100	+	.	Parent=comp143124_c0_seq1.mrna1;Target=comp143124_c0_seq1 488 492 -
Chr1	stalkie_big_nohaplotig	exon	36509295	36509300	100	+	.	Parent=comp143124_c0_seq1.mrna1;Target=comp143124_c0_seq1 482 487 -
Chr1	stalkie_big_nohaplotig	exon	36512818	36512819	100	+	.	Parent=comp143124_c0_seq1.mrna1;Target=comp143124_c0_seq1 480 481 -
Chr1	stalkie_big_nohaplotig	exon	36513687	36513690	100	+	.	Parent=comp143124_c0_seq1.mrna1;Target=comp143124_c0_seq1 476 479 -
Chr1	stalkie_big_nohaplotig	exon	36513765	36513797	62	+	.	Parent=comp143124_c0_seq1.mrna1;Target=comp143124_c0_seq1 433 475 -
Chr1	stalkie_big_nohaplotig	exon	37935753	37936173	98	+	.	Parent=comp143124_c0_seq1.mrna1;Target=comp143124_c0_seq1 12 432 -
Chr1	stalkie_big_nohaplotig	CDS	36436852	36436854	.	+	0	Parent=comp143124_c0_seq1.mrna1;Target=comp143124_c0_seq1 564 566 .
Chr1	stalkie_big_nohaplotig	CDS	36437551	36437569	.	+	0	Parent=comp143124_c0_seq1.mrna1;Target=comp143124_c0_seq1 546 563 .
Chr1	stalkie_big_nohaplotig	CDS	36442187	36442195	.	+	2	Parent=comp143124_c0_seq1.mrna1;Target=comp143124_c0_seq1 537 545 .
Chr1	stalkie_big_nohaplotig	CDS	36445902	36445903	.	+	2	Parent=comp143124_c0_seq1.mrna1;Target=comp143124_c0_seq1 535 536 .
Chr1	gffcl	locus	36612280	36616554	.	+	.	ID=RLOC_00007187;geneIDs=FBgn0036876.1.path1;transcripts=FBgn0036876.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36612280	36616554	.	+	.	ID=FBgn0036876.1.mrna1;geneID=FBgn0036876.1.path1;Name=FBgn0036876.1;Dir=sensecoverage=100.0;identity=99.4;matches=1172;mismatches=7;indels=0;unknowns=0;locus=RLOC_00007187
Chr1	stalkie_big_nohaplotig	exon	36612280	36612432	100	+	.	Parent=FBgn0036876.1.mrna1;Target=FBgn0036876.1 1 153 +
Chr1	stalkie_big_nohaplotig	exon	36615200	36615298	100	+	.	Parent=FBgn0036876.1.mrna1;Target=FBgn0036876.1 154 252 +
Chr1	stalkie_big_nohaplotig	exon	36615366	36615449	97	+	.	Parent=FBgn0036876.1.mrna1;Target=FBgn0036876.1 253 336 +
Chr1	stalkie_big_nohaplotig	exon	36615515	36615673	100	+	.	Parent=FBgn0036876.1.mrna1;Target=FBgn0036876.1 337 495 +
Chr1	stalkie_big_nohaplotig	exon	36615739	36615924	99	+	.	Parent=FBgn0036876.1.mrna1;Target=FBgn0036876.1 496 681 +
Chr1	stalkie_big_nohaplotig	exon	36615992	36616333	99	+	.	Parent=FBgn0036876.1.mrna1;Target=FBgn0036876.1 682 1023 +
Chr1	stalkie_big_nohaplotig	exon	36616399	36616554	98	+	.	Parent=FBgn0036876.1.mrna1;Target=FBgn0036876.1 1024 1179 +
Chr1	stalkie_big_nohaplotig	CDS	36612280	36612432	.	+	0	Parent=FBgn0036876.1.mrna1;Target=FBgn0036876.1 1 153 +
Chr1	stalkie_big_nohaplotig	CDS	36615200	36615298	.	+	0	Parent=FBgn0036876.1.mrna1;Target=FBgn0036876.1 154 252 +
Chr1	stalkie_big_nohaplotig	CDS	36615366	36615449	.	+	0	Parent=FBgn0036876.1.mrna1;Target=FBgn0036876.1 253 336 +
Chr1	stalkie_big_nohaplotig	CDS	36615515	36615673	.	+	0	Parent=FBgn0036876.1.mrna1;Target=FBgn0036876.1 337 495 +
Chr1	stalkie_big_nohaplotig	CDS	36615739	36615924	.	+	0	Parent=FBgn0036876.1.mrna1;Target=FBgn0036876.1 496 681 +
Chr1	stalkie_big_nohaplotig	CDS	36615992	36616333	.	+	0	Parent=FBgn0036876.1.mrna1;Target=FBgn0036876.1 682 1023 +
Chr1	stalkie_big_nohaplotig	CDS	36616399	36616554	.	+	0	Parent=FBgn0036876.1.mrna1;Target=FBgn0036876.1 1024 1179 +
Chr1	gffcl	locus	36624748	36626131	.	+	.	ID=RLOC_00007188;geneIDs=comp150514_c0_seq1.path1;transcripts=comp150514_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36624748	36626131	.	+	.	ID=comp150514_c0_seq1.mrna1;geneID=comp150514_c0_seq1.path1;Name=comp150514_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.1;matches=1357;mismatches=27;indels=13;unknowns=0;Target=comp150514_c0_seq1 1397 1 .;CDS_Target=comp150514_c0_seq1 386 201 .;locus=RLOC_00007188
Chr1	stalkie_big_nohaplotig	exon	36624748	36626131	97	+	.	Parent=comp150514_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	36624948	36625133	.	+	0	Parent=comp150514_c0_seq1.mrna1
Chr1	gffcl	locus	36626631	36640324	.	.	.	ID=RLOC_00007189;geneIDs=FBgn0036875.1.path1,comp146795_c1_seq1.path1;transcripts=FBgn0036875.1.mrna1,comp146795_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36626631	36640324	.	+	.	ID=FBgn0036875.1.mrna1;geneID=FBgn0036875.1.path1;Name=FBgn0036875.1;Dir=sensecoverage=100.0;identity=99.1;matches=1213;mismatches=11;indels=0;unknowns=0;locus=RLOC_00007189
Chr1	stalkie_big_nohaplotig	exon	36626631	36626804	100	+	.	Parent=FBgn0036875.1.mrna1;Target=FBgn0036875.1 1 174 +
Chr1	stalkie_big_nohaplotig	exon	36636239	36636337	100	+	.	Parent=FBgn0036875.1.mrna1;Target=FBgn0036875.1 175 273 +
Chr1	stalkie_big_nohaplotig	exon	36636695	36636778	100	+	.	Parent=FBgn0036875.1.mrna1;Target=FBgn0036875.1 274 357 +
Chr1	stalkie_big_nohaplotig	exon	36636982	36637140	99	+	.	Parent=FBgn0036875.1.mrna1;Target=FBgn0036875.1 358 516 +
Chr1	stalkie_big_nohaplotig	exon	36637213	36637398	97	+	.	Parent=FBgn0036875.1.mrna1;Target=FBgn0036875.1 517 702 +
Chr1	stalkie_big_nohaplotig	exon	36637468	36637809	98	+	.	Parent=FBgn0036875.1.mrna1;Target=FBgn0036875.1 703 1044 +
Chr1	stalkie_big_nohaplotig	exon	36640145	36640324	98	+	.	Parent=FBgn0036875.1.mrna1;Target=FBgn0036875.1 1045 1224 +
Chr1	stalkie_big_nohaplotig	CDS	36626631	36626804	.	+	0	Parent=FBgn0036875.1.mrna1;Target=FBgn0036875.1 1 174 +
Chr1	stalkie_big_nohaplotig	CDS	36636239	36636337	.	+	0	Parent=FBgn0036875.1.mrna1;Target=FBgn0036875.1 175 273 +
Chr1	stalkie_big_nohaplotig	CDS	36636695	36636778	.	+	0	Parent=FBgn0036875.1.mrna1;Target=FBgn0036875.1 274 357 +
Chr1	stalkie_big_nohaplotig	CDS	36636982	36637140	.	+	0	Parent=FBgn0036875.1.mrna1;Target=FBgn0036875.1 358 516 +
Chr1	stalkie_big_nohaplotig	CDS	36637213	36637398	.	+	0	Parent=FBgn0036875.1.mrna1;Target=FBgn0036875.1 517 702 +
Chr1	stalkie_big_nohaplotig	CDS	36637468	36637809	.	+	0	Parent=FBgn0036875.1.mrna1;Target=FBgn0036875.1 703 1044 +
Chr1	stalkie_big_nohaplotig	CDS	36640145	36640324	.	+	0	Parent=FBgn0036875.1.mrna1;Target=FBgn0036875.1 1045 1224 +
Chr1	stalkie_big_nohaplotig	mRNA	36636315	36636717	.	-	.	ID=comp146795_c1_seq1.mrna1;geneID=comp146795_c1_seq1.path1;Name=comp146795_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=402;mismatches=1;indels=0;unknowns=0;Target=comp146795_c1_seq1 403 1 .;CDS_Target=comp146795_c1_seq1 403 209 .;locus=RLOC_00007189
Chr1	stalkie_big_nohaplotig	exon	36636315	36636717	99	-	.	Parent=comp146795_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	36636315	36636509	.	-	0	Parent=comp146795_c1_seq1.mrna1
Chr1	gffcl	locus	36710920	36711975	.	-	.	ID=RLOC_00007190;geneIDs=comp142060_c0_seq1.path1;transcripts=comp142060_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36710920	36711975	.	-	.	ID=comp142060_c0_seq1.mrna1;geneID=comp142060_c0_seq1.path1;Name=comp142060_c0_seq1;Dir=indeterminatecoverage=98.5;identity=98.9;matches=1049;mismatches=2;indels=10;unknowns=0;Target=comp142060_c0_seq1 1056 1 .;CDS_Target=comp142060_c0_seq1 397 257 .;locus=RLOC_00007190
Chr1	stalkie_big_nohaplotig	exon	36710920	36711975	98	-	.	Parent=comp142060_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	36711579	36711719	.	-	0	Parent=comp142060_c0_seq1.mrna1
Chr1	gffcl	locus	36712189	36712630	.	+	.	ID=RLOC_00007191;geneIDs=comp140508_c0_seq1.path1;transcripts=comp140508_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36712189	36712630	.	+	.	ID=comp140508_c0_seq1.mrna1;geneID=comp140508_c0_seq1.path1;Name=comp140508_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.8;matches=440;mismatches=1;indels=0;unknowns=0;Target=comp140508_c0_seq1 82 8 .;locus=RLOC_00007191
Chr1	stalkie_big_nohaplotig	exon	36712189	36712341	100	+	.	Parent=comp140508_c0_seq1.mrna1;Target=comp140508_c0_seq1 158 6 .
Chr1	stalkie_big_nohaplotig	exon	36712343	36712630	99	+	.	Parent=comp140508_c0_seq1.mrna1;Target=comp140508_c0_seq1 562 275 .
Chr1	stalkie_big_nohaplotig	CDS	36712191	36712265	.	+	0	Parent=comp140508_c0_seq1.mrna1
Chr1	gffcl	locus	36714683	36715804	.	-	.	ID=RLOC_00007192;geneIDs=comp151574_c0_seq1.path1,comp156363_c0_seq1.path1;transcripts=comp156363_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36714683	36715286	.	-	.	ID=comp156363_c0_seq1.mrna1;geneID=comp156363_c0_seq1.path1;Name=comp156363_c0_seq1;Dir=indeterminatecoverage=92.2;identity=89.1;matches=525;mismatches=35;indels=29;unknowns=0;Target=comp156363_c0_seq1 242 141 .;locus=RLOC_00007192
Chr1	stalkie_big_nohaplotig	exon	36714683	36714949	84	-	.	Parent=comp156363_c0_seq1.mrna1;Target=comp156363_c0_seq1 655 414 .
Chr1	stalkie_big_nohaplotig	exon	36714955	36715210	91	-	.	Parent=comp156363_c0_seq1.mrna1;Target=comp156363_c0_seq1 397 138 .
Chr1	stalkie_big_nohaplotig	exon	36715225	36715286	98	-	.	Parent=comp156363_c0_seq1.mrna1;Target=comp156363_c0_seq1 112 51 .
Chr1	stalkie_big_nohaplotig	CDS	36715107	36715207	.	-	0	Parent=comp156363_c0_seq1.mrna1
Chr1	gffcl	locus	36715809	36716123	.	+	.	ID=RLOC_00007193;geneIDs=comp116042_c0_seq1.path1;transcripts=comp116042_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36715809	36716123	.	+	.	ID=comp116042_c0_seq1.mrna1;geneID=comp116042_c0_seq1.path1;Name=comp116042_c0_seq1;Dir=indeterminatecoverage=95.2;identity=98.1;matches=310;mismatches=3;indels=3;unknowns=0;Target=comp116042_c0_seq1 314 1 .;CDS_Target=comp116042_c0_seq1 313 284 .;locus=RLOC_00007193
Chr1	stalkie_big_nohaplotig	exon	36715809	36716123	98	+	.	Parent=comp116042_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	36716093	36716122	.	+	0	Parent=comp116042_c0_seq1.mrna1
Chr1	gffcl	locus	36717353	36720692	.	+	.	ID=RLOC_00007194;geneIDs=comp153059_c0_seq1.path1;transcripts=comp153059_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36717353	36720692	.	+	.	ID=comp153059_c0_seq1.mrna1;geneID=comp153059_c0_seq1.path1;Name=comp153059_c0_seq1;Dir=sensecoverage=99.4;identity=99.0;matches=821;mismatches=8;indels=0;unknowns=0;Target=comp153059_c0_seq1 239 433 +;locus=RLOC_00007194
Chr1	stalkie_big_nohaplotig	exon	36717353	36717423	100	+	.	Parent=comp153059_c0_seq1.mrna1;Target=comp153059_c0_seq1 2 72 +
Chr1	stalkie_big_nohaplotig	exon	36719446	36719998	99	+	.	Parent=comp153059_c0_seq1.mrna1;Target=comp153059_c0_seq1 73 625 +
Chr1	stalkie_big_nohaplotig	exon	36720488	36720692	98	+	.	Parent=comp153059_c0_seq1.mrna1;Target=comp153059_c0_seq1 626 830 +
Chr1	stalkie_big_nohaplotig	CDS	36719612	36719806	.	+	0	Parent=comp153059_c0_seq1.mrna1
Chr1	gffcl	locus	36789952	36790304	.	-	.	ID=RLOC_00007195;geneIDs=comp144449_c0_seq1.path1;transcripts=comp144449_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36789952	36790304	.	-	.	ID=comp144449_c0_seq1.mrna1;geneID=comp144449_c0_seq1.path1;Name=comp144449_c0_seq1;Dir=indeterminatecoverage=57.9;identity=96.9;matches=342;mismatches=11;indels=0;unknowns=0;Target=comp144449_c0_seq1 610 258 .;CDS_Target=comp144449_c0_seq1 586 491 .;locus=RLOC_00007195
Chr1	stalkie_big_nohaplotig	exon	36789952	36790304	96	-	.	Parent=comp144449_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	36789976	36790071	.	-	0	Parent=comp144449_c0_seq1.mrna1
Chr1	gffcl	locus	36791668	36833898	.	-	.	ID=RLOC_00007196;geneIDs=FBgn0003089.2.path1,FBgn0003089.6.path1;transcripts=FBgn0003089.6.mrna1,FBgn0003089.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36791668	36833898	.	-	.	ID=FBgn0003089.6.mrna1;geneID=FBgn0003089.6.path1;Name=FBgn0003089.6;Dir=sensecoverage=92.9;identity=100.0;matches=1143;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007196
Chr1	stalkie_big_nohaplotig	exon	36791668	36791864	100	-	.	Parent=FBgn0003089.6.mrna1;Target=FBgn0003089.6 1034 1230 +
Chr1	stalkie_big_nohaplotig	exon	36791930	36792084	100	-	.	Parent=FBgn0003089.6.mrna1;Target=FBgn0003089.6 879 1033 +
Chr1	stalkie_big_nohaplotig	exon	36792154	36792713	100	-	.	Parent=FBgn0003089.6.mrna1;Target=FBgn0003089.6 319 878 +
Chr1	stalkie_big_nohaplotig	exon	36818903	36818961	100	-	.	Parent=FBgn0003089.6.mrna1;Target=FBgn0003089.6 260 318 +
Chr1	stalkie_big_nohaplotig	exon	36833727	36833898	100	-	.	Parent=FBgn0003089.6.mrna1;Target=FBgn0003089.6 88 259 +
Chr1	stalkie_big_nohaplotig	CDS	36791668	36791864	.	-	2	Parent=FBgn0003089.6.mrna1;Target=FBgn0003089.6 1034 1230 +
Chr1	stalkie_big_nohaplotig	CDS	36791930	36792084	.	-	1	Parent=FBgn0003089.6.mrna1;Target=FBgn0003089.6 879 1033 +
Chr1	stalkie_big_nohaplotig	CDS	36792154	36792713	.	-	0	Parent=FBgn0003089.6.mrna1;Target=FBgn0003089.6 319 878 +
Chr1	stalkie_big_nohaplotig	CDS	36818903	36818961	.	-	2	Parent=FBgn0003089.6.mrna1;Target=FBgn0003089.6 260 318 +
Chr1	stalkie_big_nohaplotig	CDS	36833727	36833898	.	-	0	Parent=FBgn0003089.6.mrna1;Target=FBgn0003089.6 88 259 +
Chr1	stalkie_big_nohaplotig	mRNA	36815301	36818923	.	-	.	ID=FBgn0003089.2.mrna1;geneID=FBgn0003089.2.path1;Name=FBgn0003089.2;Dir=sensecoverage=100.0;identity=99.7;matches=912;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007196
Chr1	stalkie_big_nohaplotig	exon	36815301	36815476	100	-	.	Parent=FBgn0003089.2.mrna1;Target=FBgn0003089.2 740 915 +
Chr1	stalkie_big_nohaplotig	exon	36815558	36815712	98	-	.	Parent=FBgn0003089.2.mrna1;Target=FBgn0003089.2 585 739 +
Chr1	stalkie_big_nohaplotig	exon	36815795	36816357	99	-	.	Parent=FBgn0003089.2.mrna1;Target=FBgn0003089.2 22 584 +
Chr1	stalkie_big_nohaplotig	exon	36818903	36818923	100	-	.	Parent=FBgn0003089.2.mrna1;Target=FBgn0003089.2 1 21 +
Chr1	stalkie_big_nohaplotig	CDS	36815301	36815476	.	-	2	Parent=FBgn0003089.2.mrna1;Target=FBgn0003089.2 740 915 +
Chr1	stalkie_big_nohaplotig	CDS	36815558	36815712	.	-	1	Parent=FBgn0003089.2.mrna1;Target=FBgn0003089.2 585 739 +
Chr1	stalkie_big_nohaplotig	CDS	36815795	36816357	.	-	0	Parent=FBgn0003089.2.mrna1;Target=FBgn0003089.2 22 584 +
Chr1	stalkie_big_nohaplotig	CDS	36818903	36818923	.	-	0	Parent=FBgn0003089.2.mrna1;Target=FBgn0003089.2 1 21 +
Chr1	gffcl	locus	36798011	36799090	.	-	.	ID=RLOC_00007197;geneIDs=FBgn0003089.1.path1;transcripts=FBgn0003089.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36798011	36799090	.	-	.	ID=FBgn0003089.1.mrna1;geneID=FBgn0003089.1.path1;Name=FBgn0003089.1;Dir=sensecoverage=97.7;identity=99.9;matches=887;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007197
Chr1	stalkie_big_nohaplotig	exon	36798011	36798183	100	-	.	Parent=FBgn0003089.1.mrna1;Target=FBgn0003089.1 737 909 +
Chr1	stalkie_big_nohaplotig	exon	36798279	36798433	99	-	.	Parent=FBgn0003089.1.mrna1;Target=FBgn0003089.1 582 736 +
Chr1	stalkie_big_nohaplotig	exon	36798531	36799090	100	-	.	Parent=FBgn0003089.1.mrna1;Target=FBgn0003089.1 22 581 +
Chr1	stalkie_big_nohaplotig	CDS	36798011	36798183	.	-	2	Parent=FBgn0003089.1.mrna1;Target=FBgn0003089.1 737 909 +
Chr1	stalkie_big_nohaplotig	CDS	36798279	36798433	.	-	1	Parent=FBgn0003089.1.mrna1;Target=FBgn0003089.1 582 736 +
Chr1	stalkie_big_nohaplotig	CDS	36798531	36799090	.	-	0	Parent=FBgn0003089.1.mrna1;Target=FBgn0003089.1 22 581 +
Chr1	gffcl	locus	36801881	36803654	.	-	.	ID=RLOC_00007198;geneIDs=FBgn0003089.5.path1;transcripts=FBgn0003089.5.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36801881	36803654	.	-	.	ID=FBgn0003089.5.mrna1;geneID=FBgn0003089.5.path1;Name=FBgn0003089.5;Dir=sensecoverage=97.8;identity=99.7;matches=933;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007198
Chr1	stalkie_big_nohaplotig	exon	36801881	36802101	100	-	.	Parent=FBgn0003089.5.mrna1;Target=FBgn0003089.5 737 957 +
Chr1	stalkie_big_nohaplotig	exon	36802875	36803029	99	-	.	Parent=FBgn0003089.5.mrna1;Target=FBgn0003089.5 582 736 +
Chr1	stalkie_big_nohaplotig	exon	36803095	36803654	99	-	.	Parent=FBgn0003089.5.mrna1;Target=FBgn0003089.5 22 581 +
Chr1	stalkie_big_nohaplotig	CDS	36801881	36802101	.	-	2	Parent=FBgn0003089.5.mrna1;Target=FBgn0003089.5 737 957 +
Chr1	stalkie_big_nohaplotig	CDS	36802875	36803029	.	-	1	Parent=FBgn0003089.5.mrna1;Target=FBgn0003089.5 582 736 +
Chr1	stalkie_big_nohaplotig	CDS	36803095	36803654	.	-	0	Parent=FBgn0003089.5.mrna1;Target=FBgn0003089.5 22 581 +
Chr1	gffcl	locus	36805617	36806637	.	-	.	ID=RLOC_00007199;geneIDs=FBgn0003089.4.path1;transcripts=FBgn0003089.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36805617	36806637	.	-	.	ID=FBgn0003089.4.mrna1;geneID=FBgn0003089.4.path1;Name=FBgn0003089.4;Dir=sensecoverage=100.0;identity=99.5;matches=842;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007199
Chr1	stalkie_big_nohaplotig	exon	36805617	36805774	100	-	.	Parent=FBgn0003089.4.mrna1;Target=FBgn0003089.4 689 846 +
Chr1	stalkie_big_nohaplotig	exon	36805841	36805995	99	-	.	Parent=FBgn0003089.4.mrna1;Target=FBgn0003089.4 534 688 +
Chr1	stalkie_big_nohaplotig	exon	36806105	36806637	99	-	.	Parent=FBgn0003089.4.mrna1;Target=FBgn0003089.4 1 533 +
Chr1	stalkie_big_nohaplotig	CDS	36805617	36805774	.	-	2	Parent=FBgn0003089.4.mrna1;Target=FBgn0003089.4 689 846 +
Chr1	stalkie_big_nohaplotig	CDS	36805841	36805995	.	-	1	Parent=FBgn0003089.4.mrna1;Target=FBgn0003089.4 534 688 +
Chr1	stalkie_big_nohaplotig	CDS	36806105	36806637	.	-	0	Parent=FBgn0003089.4.mrna1;Target=FBgn0003089.4 1 533 +
Chr1	gffcl	locus	36808809	36809862	.	-	.	ID=RLOC_00007200;geneIDs=FBgn0003089.3.path1;transcripts=FBgn0003089.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36808809	36809862	.	-	.	ID=FBgn0003089.3.mrna1;geneID=FBgn0003089.3.path1;Name=FBgn0003089.3;Dir=sensecoverage=100.0;identity=99.8;matches=886;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007200
Chr1	stalkie_big_nohaplotig	exon	36808809	36808960	100	-	.	Parent=FBgn0003089.3.mrna1;Target=FBgn0003089.3 737 888 +
Chr1	stalkie_big_nohaplotig	exon	36809018	36809172	100	-	.	Parent=FBgn0003089.3.mrna1;Target=FBgn0003089.3 582 736 +
Chr1	stalkie_big_nohaplotig	exon	36809282	36809862	99	-	.	Parent=FBgn0003089.3.mrna1;Target=FBgn0003089.3 1 581 +
Chr1	stalkie_big_nohaplotig	CDS	36808809	36808960	.	-	2	Parent=FBgn0003089.3.mrna1;Target=FBgn0003089.3 737 888 +
Chr1	stalkie_big_nohaplotig	CDS	36809018	36809172	.	-	1	Parent=FBgn0003089.3.mrna1;Target=FBgn0003089.3 582 736 +
Chr1	stalkie_big_nohaplotig	CDS	36809282	36809862	.	-	0	Parent=FBgn0003089.3.mrna1;Target=FBgn0003089.3 1 581 +
Chr1	gffcl	locus	36902487	36902532	.	-	.	ID=RLOC_00007201;geneIDs=FBgn0035132.2.path1;transcripts=FBgn0035132.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36902487	36902532	.	-	.	ID=FBgn0035132.2.mrna1;geneID=FBgn0035132.2.path1;Name=FBgn0035132.2;Dir=indeterminatecoverage=2.7;identity=95.7;matches=44;mismatches=2;indels=0;unknowns=0;Target=FBgn0035132.2 46 1 .;locus=RLOC_00007201
Chr1	stalkie_big_nohaplotig	exon	36902487	36902532	95	-	.	Parent=FBgn0035132.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	36902487	36902532	.	-	0	Parent=FBgn0035132.2.mrna1
Chr1	gffcl	locus	36922607	36932784	.	-	.	ID=RLOC_00007202;geneIDs=FBgn0035132.1.path1;transcripts=FBgn0035132.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36922607	36932784	.	-	.	ID=FBgn0035132.1.mrna1;geneID=FBgn0035132.1.path1;Name=FBgn0035132.1;Dir=sensecoverage=100.0;identity=99.8;matches=1209;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007202
Chr1	stalkie_big_nohaplotig	exon	36922607	36922706	100	-	.	Parent=FBgn0035132.1.mrna1;Target=FBgn0035132.1 1113 1212 +
Chr1	stalkie_big_nohaplotig	exon	36923686	36923880	98	-	.	Parent=FBgn0035132.1.mrna1;Target=FBgn0035132.1 918 1112 +
Chr1	stalkie_big_nohaplotig	exon	36926432	36926603	100	-	.	Parent=FBgn0035132.1.mrna1;Target=FBgn0035132.1 746 917 +
Chr1	stalkie_big_nohaplotig	exon	36926661	36926912	100	-	.	Parent=FBgn0035132.1.mrna1;Target=FBgn0035132.1 494 745 +
Chr1	stalkie_big_nohaplotig	exon	36926997	36927182	100	-	.	Parent=FBgn0035132.1.mrna1;Target=FBgn0035132.1 308 493 +
Chr1	stalkie_big_nohaplotig	exon	36927274	36927427	99	-	.	Parent=FBgn0035132.1.mrna1;Target=FBgn0035132.1 154 307 +
Chr1	stalkie_big_nohaplotig	exon	36932632	36932784	100	-	.	Parent=FBgn0035132.1.mrna1;Target=FBgn0035132.1 1 153 +
Chr1	stalkie_big_nohaplotig	CDS	36922607	36922706	.	-	1	Parent=FBgn0035132.1.mrna1;Target=FBgn0035132.1 1113 1212 +
Chr1	stalkie_big_nohaplotig	CDS	36923686	36923880	.	-	1	Parent=FBgn0035132.1.mrna1;Target=FBgn0035132.1 918 1112 +
Chr1	stalkie_big_nohaplotig	CDS	36926432	36926603	.	-	2	Parent=FBgn0035132.1.mrna1;Target=FBgn0035132.1 746 917 +
Chr1	stalkie_big_nohaplotig	CDS	36926661	36926912	.	-	2	Parent=FBgn0035132.1.mrna1;Target=FBgn0035132.1 494 745 +
Chr1	stalkie_big_nohaplotig	CDS	36926997	36927182	.	-	2	Parent=FBgn0035132.1.mrna1;Target=FBgn0035132.1 308 493 +
Chr1	stalkie_big_nohaplotig	CDS	36927274	36927427	.	-	0	Parent=FBgn0035132.1.mrna1;Target=FBgn0035132.1 154 307 +
Chr1	stalkie_big_nohaplotig	CDS	36932632	36932784	.	-	0	Parent=FBgn0035132.1.mrna1;Target=FBgn0035132.1 1 153 +
Chr1	gffcl	locus	36950556	36951068	.	+	.	ID=RLOC_00007203;geneIDs=FBgn0015320.1.path1;transcripts=FBgn0015320.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36950556	36951068	.	+	.	ID=FBgn0015320.1.mrna1;geneID=FBgn0015320.1.path1;Name=FBgn0015320.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=511;mismatches=2;indels=0;unknowns=0;Target=FBgn0015320.1 513 1 .;CDS_Target=FBgn0015320.1 513 49 .;locus=RLOC_00007203
Chr1	stalkie_big_nohaplotig	exon	36950556	36951068	99	+	.	Parent=FBgn0015320.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	36950604	36951068	.	+	0	Parent=FBgn0015320.1.mrna1
Chr1	gffcl	locus	36978142	36988792	.	-	.	ID=RLOC_00007204;geneIDs=FBgn0036860.1.path1;transcripts=FBgn0036860.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36978142	36988792	.	-	.	ID=FBgn0036860.1.mrna1;geneID=FBgn0036860.1.path1;Name=FBgn0036860.1;Dir=sensecoverage=100.0;identity=99.7;matches=628;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007204
Chr1	stalkie_big_nohaplotig	exon	36978142	36978229	98	-	.	Parent=FBgn0036860.1.mrna1;Target=FBgn0036860.1 543 630 +
Chr1	stalkie_big_nohaplotig	exon	36978306	36978545	99	-	.	Parent=FBgn0036860.1.mrna1;Target=FBgn0036860.1 303 542 +
Chr1	stalkie_big_nohaplotig	exon	36978741	36978815	100	-	.	Parent=FBgn0036860.1.mrna1;Target=FBgn0036860.1 228 302 +
Chr1	stalkie_big_nohaplotig	exon	36978880	36978940	100	-	.	Parent=FBgn0036860.1.mrna1;Target=FBgn0036860.1 167 227 +
Chr1	stalkie_big_nohaplotig	exon	36988627	36988792	100	-	.	Parent=FBgn0036860.1.mrna1;Target=FBgn0036860.1 1 166 +
Chr1	stalkie_big_nohaplotig	CDS	36978142	36978229	.	-	1	Parent=FBgn0036860.1.mrna1;Target=FBgn0036860.1 543 630 +
Chr1	stalkie_big_nohaplotig	CDS	36978306	36978545	.	-	1	Parent=FBgn0036860.1.mrna1;Target=FBgn0036860.1 303 542 +
Chr1	stalkie_big_nohaplotig	CDS	36978741	36978815	.	-	1	Parent=FBgn0036860.1.mrna1;Target=FBgn0036860.1 228 302 +
Chr1	stalkie_big_nohaplotig	CDS	36978880	36978940	.	-	2	Parent=FBgn0036860.1.mrna1;Target=FBgn0036860.1 167 227 +
Chr1	stalkie_big_nohaplotig	CDS	36988627	36988792	.	-	0	Parent=FBgn0036860.1.mrna1;Target=FBgn0036860.1 1 166 +
Chr1	gffcl	locus	36996687	36997371	.	+	.	ID=RLOC_00007205;geneIDs=FBgn0052271.2.path1;transcripts=FBgn0052271.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	36996687	36997371	.	+	.	ID=FBgn0052271.2.mrna1;geneID=FBgn0052271.2.path1;Name=FBgn0052271.2;Dir=indeterminatecoverage=93.6;identity=99.1;matches=679;mismatches=6;indels=0;unknowns=0;Target=FBgn0052271.2 685 1 .;locus=RLOC_00007205
Chr1	stalkie_big_nohaplotig	exon	36996687	36997371	99	+	.	Parent=FBgn0052271.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	36996687	36997371	.	+	0	Parent=FBgn0052271.2.mrna1
Chr1	gffcl	locus	37001174	37001935	.	+	.	ID=RLOC_00007206;geneIDs=ORF3146.path1;transcripts=ORF3146.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37001174	37001935	.	+	.	ID=ORF3146.mrna1;geneID=ORF3146.path1;Name=ORF3146;Dir=indeterminatecoverage=100.0;identity=100.0;matches=762;mismatches=0;indels=0;unknowns=0;Target=ORF3146 762 1 .;locus=RLOC_00007206
Chr1	stalkie_big_nohaplotig	exon	37001174	37001935	100	+	.	Parent=ORF3146.mrna1
Chr1	stalkie_big_nohaplotig	CDS	37001174	37001935	.	+	0	Parent=ORF3146.mrna1
Chr1	gffcl	locus	37002566	37033422	.	-	.	ID=RLOC_00007207;geneIDs=comp152497_c0_seq1.path1;transcripts=comp152497_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37002566	37033422	.	-	.	ID=comp152497_c0_seq1.mrna1;geneID=comp152497_c0_seq1.path1;Name=comp152497_c0_seq1;Dir=indeterminatecoverage=91.5;identity=93.7;matches=1336;mismatches=36;indels=54;unknowns=0;Target=comp152497_c0_seq1 1149 1036 .;locus=RLOC_00007207
Chr1	stalkie_big_nohaplotig	exon	37002566	37003486	98	-	.	Parent=comp152497_c0_seq1.mrna1;Target=comp152497_c0_seq1 1747 826 .
Chr1	stalkie_big_nohaplotig	exon	37007852	37007860	100	-	.	Parent=comp152497_c0_seq1.mrna1;Target=comp152497_c0_seq1 747 739 .
Chr1	stalkie_big_nohaplotig	exon	37007892	37008288	86	-	.	Parent=comp152497_c0_seq1.mrna1;Target=comp152497_c0_seq1 628 219 .
Chr1	stalkie_big_nohaplotig	exon	37015616	37015623	100	-	.	Parent=comp152497_c0_seq1.mrna1;Target=comp152497_c0_seq1 218 211 .
Chr1	stalkie_big_nohaplotig	exon	37022471	37022478	100	-	.	Parent=comp152497_c0_seq1.mrna1;Target=comp152497_c0_seq1 210 203 .
Chr1	stalkie_big_nohaplotig	exon	37023474	37023484	33	-	.	Parent=comp152497_c0_seq1.mrna1;Target=comp152497_c0_seq1 202 176 .
Chr1	stalkie_big_nohaplotig	exon	37024495	37024502	100	-	.	Parent=comp152497_c0_seq1.mrna1;Target=comp152497_c0_seq1 175 168 .
Chr1	stalkie_big_nohaplotig	exon	37029039	37029051	61	-	.	Parent=comp152497_c0_seq1.mrna1;Target=comp152497_c0_seq1 167 159 .
Chr1	stalkie_big_nohaplotig	exon	37033413	37033422	100	-	.	Parent=comp152497_c0_seq1.mrna1;Target=comp152497_c0_seq1 158 149 .
Chr1	stalkie_big_nohaplotig	CDS	37003163	37003276	.	-	0	Parent=comp152497_c0_seq1.mrna1
Chr1	gffcl	locus	37005733	37006502	.	+	.	ID=RLOC_00007208;geneIDs=ORF2909.path1;transcripts=ORF2909.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37005733	37006502	.	+	.	ID=ORF2909.mrna1;geneID=ORF2909.path1;Name=ORF2909;Dir=indeterminatecoverage=97.7;identity=98.7;matches=761;mismatches=9;indels=1;unknowns=0;Target=ORF2909 789 19 .;CDS_Target=ORF2909 122 48 .;locus=RLOC_00007208
Chr1	stalkie_big_nohaplotig	exon	37005733	37006502	98	+	.	Parent=ORF2909.mrna1
Chr1	stalkie_big_nohaplotig	CDS	37005762	37005835	.	+	0	Parent=ORF2909.mrna1
Chr1	gffcl	locus	37085070	37085901	.	+	.	ID=RLOC_00007209;geneIDs=comp154610_c0_seq1.path1;transcripts=comp154610_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37085070	37085901	.	+	.	ID=comp154610_c0_seq1.mrna1;geneID=comp154610_c0_seq1.path1;Name=comp154610_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=825;mismatches=7;indels=3;unknowns=0;Target=comp154610_c0_seq1 835 1 .;CDS_Target=comp154610_c0_seq1 94 2 .;locus=RLOC_00007209
Chr1	stalkie_big_nohaplotig	exon	37085070	37085901	98	+	.	Parent=comp154610_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	37085071	37085163	.	+	0	Parent=comp154610_c0_seq1.mrna1
Chr1	gffcl	locus	37091413	37091867	.	-	.	ID=RLOC_00007210;geneIDs=comp113185_c1_seq1.path1;transcripts=comp113185_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37091413	37091867	.	-	.	ID=comp113185_c1_seq1.mrna1;geneID=comp113185_c1_seq1.path1;Name=comp113185_c1_seq1;Dir=indeterminatecoverage=96.0;identity=99.1;matches=451;mismatches=0;indels=4;unknowns=0;Target=comp113185_c1_seq1 470 20 .;CDS_Target=comp113185_c1_seq1 230 75 .;locus=RLOC_00007210
Chr1	stalkie_big_nohaplotig	exon	37091413	37091867	99	-	.	Parent=comp113185_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	37091653	37091808	.	-	0	Parent=comp113185_c1_seq1.mrna1
Chr1	gffcl	locus	37100809	37122899	.	+	.	ID=RLOC_00007211;geneIDs=FBgn0020386.1.path2;transcripts=FBgn0020386.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	37100809	37122899	.	+	.	ID=FBgn0020386.1.mrna2;geneID=FBgn0020386.1.path2;Name=FBgn0020386.1;Dir=sensecoverage=71.8;identity=99.5;matches=1924;mismatches=7;indels=3;unknowns=0;locus=RLOC_00007211
Chr1	stalkie_big_nohaplotig	exon	37100809	37101018	98	+	.	Parent=FBgn0020386.1.mrna2;Target=FBgn0020386.1 569 775 +
Chr1	stalkie_big_nohaplotig	exon	37101178	37101504	100	+	.	Parent=FBgn0020386.1.mrna2;Target=FBgn0020386.1 776 1102 +
Chr1	stalkie_big_nohaplotig	exon	37121430	37122551	99	+	.	Parent=FBgn0020386.1.mrna2;Target=FBgn0020386.1 1103 2224 +
Chr1	stalkie_big_nohaplotig	exon	37122625	37122899	99	+	.	Parent=FBgn0020386.1.mrna2;Target=FBgn0020386.1 2225 2499 +
Chr1	stalkie_big_nohaplotig	CDS	37100835	37101018	.	+	0	Parent=FBgn0020386.1.mrna2;Target=FBgn0020386.1 595 775 +
Chr1	stalkie_big_nohaplotig	CDS	37101178	37101504	.	+	2	Parent=FBgn0020386.1.mrna2;Target=FBgn0020386.1 776 1102 +
Chr1	stalkie_big_nohaplotig	CDS	37121430	37122551	.	+	2	Parent=FBgn0020386.1.mrna2;Target=FBgn0020386.1 1103 2224 +
Chr1	stalkie_big_nohaplotig	CDS	37122625	37122899	.	+	2	Parent=FBgn0020386.1.mrna2;Target=FBgn0020386.1 2225 2499 +
Chr1	gffcl	locus	37132419	37133180	.	-	.	ID=RLOC_00007212;geneIDs=ORF3146.path2;transcripts=ORF3146.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	37132419	37133180	.	-	.	ID=ORF3146.mrna2;geneID=ORF3146.path2;Name=ORF3146;Dir=indeterminatecoverage=100.0;identity=100.0;matches=762;mismatches=0;indels=0;unknowns=0;Target=ORF3146 762 1 .;locus=RLOC_00007212
Chr1	stalkie_big_nohaplotig	exon	37132419	37133180	100	-	.	Parent=ORF3146.mrna2
Chr1	stalkie_big_nohaplotig	CDS	37132419	37133180	.	-	0	Parent=ORF3146.mrna2
Chr1	gffcl	locus	37180166	37180953	.	-	.	ID=RLOC_00007214;geneIDs=FBgn0035070.5.path1;transcripts=FBgn0035070.5.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37180166	37180953	.	-	.	ID=FBgn0035070.5.mrna1;geneID=FBgn0035070.5.path1;Name=FBgn0035070.5;Dir=indeterminatecoverage=99.1;identity=99.0;matches=780;mismatches=8;indels=0;unknowns=0;Target=FBgn0035070.5 795 8 .;CDS_Target=FBgn0035070.5 795 49 .;locus=RLOC_00007214
Chr1	stalkie_big_nohaplotig	exon	37180166	37180953	98	-	.	Parent=FBgn0035070.5.mrna1
Chr1	stalkie_big_nohaplotig	CDS	37180166	37180912	.	-	0	Parent=FBgn0035070.5.mrna1
Chr1	gffcl	locus	37225354	37226132	.	-	.	ID=RLOC_00007215;geneIDs=FBgn0035070.4.path1;transcripts=FBgn0035070.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37225354	37226132	.	-	.	ID=FBgn0035070.4.mrna1;geneID=FBgn0035070.4.path1;Name=FBgn0035070.4;Dir=indeterminatecoverage=98.0;identity=98.8;matches=770;mismatches=9;indels=0;unknowns=0;Target=FBgn0035070.4 795 17 .;CDS_Target=FBgn0035070.4 795 19 .;locus=RLOC_00007215
Chr1	stalkie_big_nohaplotig	exon	37225354	37226132	98	-	.	Parent=FBgn0035070.4.mrna1
Chr1	stalkie_big_nohaplotig	CDS	37225354	37226130	.	-	0	Parent=FBgn0035070.4.mrna1
Chr1	gffcl	locus	37379669	37386986	.	+	.	ID=RLOC_00007216;geneIDs=comp147618_c0_seq1.path1,comp151805_c0_seq1.path1;transcripts=comp151805_c0_seq1.mrna1,comp147618_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37379669	37386986	.	+	.	ID=comp151805_c0_seq1.mrna1;geneID=comp151805_c0_seq1.path1;Name=comp151805_c0_seq1;Dir=antisensecoverage=100.0;identity=98.4;matches=925;mismatches=8;indels=7;unknowns=0;Target=comp151805_c0_seq1 651 803 .;locus=RLOC_00007216
Chr1	stalkie_big_nohaplotig	exon	37379669	37380031	96	+	.	Parent=comp151805_c0_seq1.mrna1;Target=comp151805_c0_seq1 578 935 -
Chr1	stalkie_big_nohaplotig	exon	37380090	37380136	93	+	.	Parent=comp151805_c0_seq1.mrna1;Target=comp151805_c0_seq1 531 577 -
Chr1	stalkie_big_nohaplotig	exon	37386308	37386356	100	+	.	Parent=comp151805_c0_seq1.mrna1;Target=comp151805_c0_seq1 482 530 -
Chr1	stalkie_big_nohaplotig	exon	37386437	37386559	100	+	.	Parent=comp151805_c0_seq1.mrna1;Target=comp151805_c0_seq1 358 480 -
Chr1	stalkie_big_nohaplotig	exon	37386630	37386986	100	+	.	Parent=comp151805_c0_seq1.mrna1;Target=comp151805_c0_seq1 1 357 -
Chr1	stalkie_big_nohaplotig	CDS	37379806	37379958	.	+	0	Parent=comp151805_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37380113	37384335	.	+	.	ID=comp147618_c0_seq1.mrna1;geneID=comp147618_c0_seq1.path1;Name=comp147618_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=454;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007216
Chr1	stalkie_big_nohaplotig	exon	37380113	37380136	91	+	.	Parent=comp147618_c0_seq1.mrna1;Target=comp147618_c0_seq1 436 459 -
Chr1	stalkie_big_nohaplotig	exon	37383901	37384335	99	+	.	Parent=comp147618_c0_seq1.mrna1;Target=comp147618_c0_seq1 1 435 -
Chr1	stalkie_big_nohaplotig	CDS	37380115	37380136	.	+	0	Parent=comp147618_c0_seq1.mrna1;Target=comp147618_c0_seq1 436 457 .
Chr1	stalkie_big_nohaplotig	CDS	37383901	37383983	.	+	2	Parent=comp147618_c0_seq1.mrna1;Target=comp147618_c0_seq1 353 435 .
Chr1	gffcl	locus	37430062	37430792	.	+	.	ID=RLOC_00007217;geneIDs=comp155983_c0_seq1.path7;transcripts=comp155983_c0_seq1.mrna7
Chr1	stalkie_big_nohaplotig	mRNA	37430062	37430792	.	+	.	ID=comp155983_c0_seq1.mrna7;geneID=comp155983_c0_seq1.path7;Name=comp155983_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=722;mismatches=9;indels=0;unknowns=0;Target=comp155983_c0_seq1 731 1 .;CDS_Target=comp155983_c0_seq1 105 1 .;locus=RLOC_00007217
Chr1	stalkie_big_nohaplotig	exon	37430062	37430792	98	+	.	Parent=comp155983_c0_seq1.mrna7
Chr1	stalkie_big_nohaplotig	CDS	37430062	37430166	.	+	0	Parent=comp155983_c0_seq1.mrna7
Chr1	gffcl	locus	37471716	37473918	.	+	.	ID=RLOC_00007218;geneIDs=comp162638_c1_seq1.path1;transcripts=comp162638_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37471716	37473918	.	+	.	ID=comp162638_c1_seq1.mrna1;geneID=comp162638_c1_seq1.path1;Name=comp162638_c1_seq1;Dir=indeterminatecoverage=99.9;identity=99.0;matches=2187;mismatches=15;indels=8;unknowns=0;Target=comp162638_c1_seq1 2210 2 .;CDS_Target=comp162638_c1_seq1 896 780 .;locus=RLOC_00007218
Chr1	stalkie_big_nohaplotig	exon	37471716	37473918	98	+	.	Parent=comp162638_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	37472490	37472606	.	+	0	Parent=comp162638_c1_seq1.mrna1
Chr1	gffcl	locus	37475142	37476053	.	+	.	ID=RLOC_00007219;geneIDs=comp156930_c0_seq1.path1;transcripts=comp156930_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37475142	37476053	.	+	.	ID=comp156930_c0_seq1.mrna1;geneID=comp156930_c0_seq1.path1;Name=comp156930_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.6;matches=885;mismatches=27;indels=4;unknowns=0;Target=comp156930_c0_seq1 916 1 .;CDS_Target=comp156930_c0_seq1 462 442 .;locus=RLOC_00007219
Chr1	stalkie_big_nohaplotig	exon	37475142	37476053	96	+	.	Parent=comp156930_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	37475583	37475603	.	+	0	Parent=comp156930_c0_seq1.mrna1
Chr1	gffcl	locus	37480178	37480808	.	-	.	ID=RLOC_00007220;geneIDs=comp700761_c0_seq1.path1;transcripts=comp700761_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37480178	37480808	.	-	.	ID=comp700761_c0_seq1.mrna1;geneID=comp700761_c0_seq1.path1;Name=comp700761_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=630;mismatches=1;indels=0;unknowns=0;Target=comp700761_c0_seq1 631 1 .;CDS_Target=comp700761_c0_seq1 530 408 .;locus=RLOC_00007220
Chr1	stalkie_big_nohaplotig	exon	37480178	37480808	99	-	.	Parent=comp700761_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	37480279	37480401	.	-	0	Parent=comp700761_c0_seq1.mrna1
Chr1	gffcl	locus	37481014	37481363	.	-	.	ID=RLOC_00007221;geneIDs=comp143105_c0_seq1.path1;transcripts=comp143105_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37481014	37481363	.	-	.	ID=comp143105_c0_seq1.mrna1;geneID=comp143105_c0_seq1.path1;Name=comp143105_c0_seq1;Dir=indeterminatecoverage=88.6;identity=97.7;matches=342;mismatches=8;indels=0;unknowns=0;Target=comp143105_c0_seq1 350 1 .;CDS_Target=comp143105_c0_seq1 38 3 .;locus=RLOC_00007221
Chr1	stalkie_big_nohaplotig	exon	37481014	37481363	97	-	.	Parent=comp143105_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	37481326	37481361	.	-	0	Parent=comp143105_c0_seq1.mrna1
Chr1	gffcl	locus	37484308	37484750	.	-	.	ID=RLOC_00007222;geneIDs=comp148414_c0_seq1.path1;transcripts=comp148414_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37484308	37484750	.	-	.	ID=comp148414_c0_seq1.mrna1;geneID=comp148414_c0_seq1.path1;Name=comp148414_c0_seq1;Dir=indeterminatecoverage=96.9;identity=99.1;matches=439;mismatches=3;indels=1;unknowns=0;Target=comp148414_c0_seq1 442 1 .;CDS_Target=comp148414_c0_seq1 340 200 .;locus=RLOC_00007222
Chr1	stalkie_big_nohaplotig	exon	37484308	37484750	99	-	.	Parent=comp148414_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	37484411	37484551	.	-	0	Parent=comp148414_c0_seq1.mrna1
Chr1	gffcl	locus	37490463	37496605	.	+	.	ID=RLOC_00007223;geneIDs=FBgn0035099.1.path1;transcripts=FBgn0035099.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37490463	37496605	.	+	.	ID=FBgn0035099.1.mrna1;geneID=FBgn0035099.1.path1;Name=FBgn0035099.1;Dir=sensecoverage=100.0;identity=99.1;matches=2324;mismatches=21;indels=1;unknowns=0;Target=FBgn0035099.1 3 182 +;locus=RLOC_00007223
Chr1	stalkie_big_nohaplotig	exon	37490463	37490991	96	+	.	Parent=FBgn0035099.1.mrna1;Target=FBgn0035099.1 1 530 +
Chr1	stalkie_big_nohaplotig	exon	37491197	37491507	99	+	.	Parent=FBgn0035099.1.mrna1;Target=FBgn0035099.1 531 841 +
Chr1	stalkie_big_nohaplotig	exon	37491947	37492067	99	+	.	Parent=FBgn0035099.1.mrna1;Target=FBgn0035099.1 842 962 +
Chr1	stalkie_big_nohaplotig	exon	37493230	37493369	100	+	.	Parent=FBgn0035099.1.mrna1;Target=FBgn0035099.1 963 1102 +
Chr1	stalkie_big_nohaplotig	exon	37493813	37494026	100	+	.	Parent=FBgn0035099.1.mrna1;Target=FBgn0035099.1 1103 1316 +
Chr1	stalkie_big_nohaplotig	exon	37494089	37494245	100	+	.	Parent=FBgn0035099.1.mrna1;Target=FBgn0035099.1 1317 1473 +
Chr1	stalkie_big_nohaplotig	exon	37494301	37494469	100	+	.	Parent=FBgn0035099.1.mrna1;Target=FBgn0035099.1 1474 1642 +
Chr1	stalkie_big_nohaplotig	exon	37495054	37495362	100	+	.	Parent=FBgn0035099.1.mrna1;Target=FBgn0035099.1 1643 1951 +
Chr1	stalkie_big_nohaplotig	exon	37495427	37495532	100	+	.	Parent=FBgn0035099.1.mrna1;Target=FBgn0035099.1 1952 2057 +
Chr1	stalkie_big_nohaplotig	exon	37495601	37495687	100	+	.	Parent=FBgn0035099.1.mrna1;Target=FBgn0035099.1 2058 2144 +
Chr1	stalkie_big_nohaplotig	exon	37496317	37496454	100	+	.	Parent=FBgn0035099.1.mrna1;Target=FBgn0035099.1 2145 2282 +
Chr1	stalkie_big_nohaplotig	exon	37496542	37496605	100	+	.	Parent=FBgn0035099.1.mrna1;Target=FBgn0035099.1 2283 2346 +
Chr1	stalkie_big_nohaplotig	CDS	37490465	37490643	.	+	0	Parent=FBgn0035099.1.mrna1
Chr1	gffcl	locus	37516126	37516646	.	-	.	ID=RLOC_00007224;geneIDs=comp401288_c0_seq1.path1;transcripts=comp401288_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37516126	37516646	.	-	.	ID=comp401288_c0_seq1.mrna1;geneID=comp401288_c0_seq1.path1;Name=comp401288_c0_seq1;Dir=indeterminatecoverage=100.0;identity=85.6;matches=411;mismatches=41;indels=28;unknowns=0;Target=comp401288_c0_seq1 476 408 .;locus=RLOC_00007224
Chr1	stalkie_big_nohaplotig	exon	37516126	37516198	95	-	.	Parent=comp401288_c0_seq1.mrna1;Target=comp401288_c0_seq1 478 406 .
Chr1	stalkie_big_nohaplotig	exon	37516266	37516646	83	-	.	Parent=comp401288_c0_seq1.mrna1;Target=comp401288_c0_seq1 405 1 .
Chr1	stalkie_big_nohaplotig	CDS	37516128	37516196	.	-	0	Parent=comp401288_c0_seq1.mrna1
Chr1	gffcl	locus	37548770	37549160	.	+	.	ID=RLOC_00007225;geneIDs=comp47297_c0_seq1.path1;transcripts=comp47297_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37548770	37549160	.	+	.	ID=comp47297_c0_seq1.mrna1;geneID=comp47297_c0_seq1.path1;Name=comp47297_c0_seq1;Dir=indeterminatecoverage=96.8;identity=99.7;matches=390;mismatches=1;indels=0;unknowns=0;Target=comp47297_c0_seq1 404 14 .;CDS_Target=comp47297_c0_seq1 60 16 .;locus=RLOC_00007225
Chr1	stalkie_big_nohaplotig	exon	37548770	37549160	99	+	.	Parent=comp47297_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	37548772	37548816	.	+	0	Parent=comp47297_c0_seq1.mrna1
Chr1	gffcl	locus	37549506	37602313	.	+	.	ID=RLOC_00007226;geneIDs=FBgn0035101.1.path1,comp162009_c1_seq1.path1;transcripts=FBgn0035101.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37549506	37600734	.	+	.	ID=FBgn0035101.1.mrna1;geneID=FBgn0035101.1.path1;Name=FBgn0035101.1;Dir=sensecoverage=100.0;identity=100.0;matches=1999;mismatches=0;indels=1;unknowns=7;locus=RLOC_00007226
Chr1	stalkie_big_nohaplotig	exon	37549506	37549583	100	+	.	Parent=FBgn0035101.1.mrna1;Target=FBgn0035101.1 1 78 +
Chr1	stalkie_big_nohaplotig	exon	37574536	37574679	100	+	.	Parent=FBgn0035101.1.mrna1;Target=FBgn0035101.1 79 222 +
Chr1	stalkie_big_nohaplotig	exon	37579512	37579847	100	+	.	Parent=FBgn0035101.1.mrna1;Target=FBgn0035101.1 223 558 +
Chr1	stalkie_big_nohaplotig	exon	37599112	37599881	100	+	.	Parent=FBgn0035101.1.mrna1;Target=FBgn0035101.1 559 1328 +
Chr1	stalkie_big_nohaplotig	exon	37600057	37600734	99	+	.	Parent=FBgn0035101.1.mrna1;Target=FBgn0035101.1 1329 2007 +
Chr1	stalkie_big_nohaplotig	CDS	37549506	37549583	.	+	0	Parent=FBgn0035101.1.mrna1;Target=FBgn0035101.1 1 78 +
Chr1	stalkie_big_nohaplotig	CDS	37574536	37574679	.	+	0	Parent=FBgn0035101.1.mrna1;Target=FBgn0035101.1 79 222 +
Chr1	stalkie_big_nohaplotig	CDS	37579512	37579847	.	+	0	Parent=FBgn0035101.1.mrna1;Target=FBgn0035101.1 223 558 +
Chr1	stalkie_big_nohaplotig	CDS	37599112	37599881	.	+	0	Parent=FBgn0035101.1.mrna1;Target=FBgn0035101.1 559 1328 +
Chr1	stalkie_big_nohaplotig	CDS	37600057	37600734	.	+	1	Parent=FBgn0035101.1.mrna1;Target=FBgn0035101.1 1329 2007 +
Chr1	gffcl	locus	37605444	37607307	.	-	.	ID=RLOC_00007227;geneIDs=FBgn0083976.1.path1,FBgn0083992.1.path1;transcripts=FBgn0083976.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37606006	37607307	.	-	.	ID=FBgn0083976.1.mrna1;geneID=FBgn0083976.1.path1;Name=FBgn0083976.1;Dir=sensecoverage=100.0;identity=99.0;matches=1031;mismatches=10;indels=0;unknowns=0;locus=RLOC_00007227
Chr1	stalkie_big_nohaplotig	exon	37606006	37606239	98	-	.	Parent=FBgn0083976.1.mrna1;Target=FBgn0083976.1 808 1041 +
Chr1	stalkie_big_nohaplotig	exon	37606323	37606581	98	-	.	Parent=FBgn0083976.1.mrna1;Target=FBgn0083976.1 549 807 +
Chr1	stalkie_big_nohaplotig	exon	37606638	37606952	99	-	.	Parent=FBgn0083976.1.mrna1;Target=FBgn0083976.1 234 548 +
Chr1	stalkie_big_nohaplotig	exon	37607013	37607141	100	-	.	Parent=FBgn0083976.1.mrna1;Target=FBgn0083976.1 105 233 +
Chr1	stalkie_big_nohaplotig	exon	37607204	37607307	100	-	.	Parent=FBgn0083976.1.mrna1;Target=FBgn0083976.1 1 104 +
Chr1	stalkie_big_nohaplotig	CDS	37606006	37606239	.	-	0	Parent=FBgn0083976.1.mrna1;Target=FBgn0083976.1 808 1041 +
Chr1	stalkie_big_nohaplotig	CDS	37606323	37606581	.	-	1	Parent=FBgn0083976.1.mrna1;Target=FBgn0083976.1 549 807 +
Chr1	stalkie_big_nohaplotig	CDS	37606638	37606952	.	-	1	Parent=FBgn0083976.1.mrna1;Target=FBgn0083976.1 234 548 +
Chr1	stalkie_big_nohaplotig	CDS	37607013	37607141	.	-	1	Parent=FBgn0083976.1.mrna1;Target=FBgn0083976.1 105 233 +
Chr1	stalkie_big_nohaplotig	CDS	37607204	37607307	.	-	0	Parent=FBgn0083976.1.mrna1;Target=FBgn0083976.1 1 104 +
Chr1	gffcl	locus	37608998	37612105	.	+	.	ID=RLOC_00007228;geneIDs=FBgn0027786.1.path1;transcripts=FBgn0027786.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37608998	37612105	.	+	.	ID=FBgn0027786.1.mrna1;geneID=FBgn0027786.1.path1;Name=FBgn0027786.1;Dir=sensecoverage=100.0;identity=99.6;matches=995;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007228
Chr1	stalkie_big_nohaplotig	exon	37608998	37609244	100	+	.	Parent=FBgn0027786.1.mrna1;Target=FBgn0027786.1 1 247 +
Chr1	stalkie_big_nohaplotig	exon	37609301	37609475	100	+	.	Parent=FBgn0027786.1.mrna1;Target=FBgn0027786.1 248 422 +
Chr1	stalkie_big_nohaplotig	exon	37609542	37609860	99	+	.	Parent=FBgn0027786.1.mrna1;Target=FBgn0027786.1 423 741 +
Chr1	stalkie_big_nohaplotig	exon	37609919	37610097	98	+	.	Parent=FBgn0027786.1.mrna1;Target=FBgn0027786.1 742 920 +
Chr1	stalkie_big_nohaplotig	exon	37612027	37612105	100	+	.	Parent=FBgn0027786.1.mrna1;Target=FBgn0027786.1 921 999 +
Chr1	stalkie_big_nohaplotig	CDS	37608998	37609244	.	+	0	Parent=FBgn0027786.1.mrna1;Target=FBgn0027786.1 1 247 +
Chr1	stalkie_big_nohaplotig	CDS	37609301	37609475	.	+	2	Parent=FBgn0027786.1.mrna1;Target=FBgn0027786.1 248 422 +
Chr1	stalkie_big_nohaplotig	CDS	37609542	37609860	.	+	1	Parent=FBgn0027786.1.mrna1;Target=FBgn0027786.1 423 741 +
Chr1	stalkie_big_nohaplotig	CDS	37609919	37610097	.	+	0	Parent=FBgn0027786.1.mrna1;Target=FBgn0027786.1 742 920 +
Chr1	stalkie_big_nohaplotig	CDS	37612027	37612105	.	+	1	Parent=FBgn0027786.1.mrna1;Target=FBgn0027786.1 921 999 +
Chr1	gffcl	locus	37613053	37619969	.	+	.	ID=RLOC_00007229;geneIDs=FBgn0035192.1.path1;transcripts=FBgn0035192.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37613053	37619969	.	+	.	ID=FBgn0035192.1.mrna1;geneID=FBgn0035192.1.path1;Name=FBgn0035192.1;Dir=sensecoverage=100.0;identity=98.6;matches=2269;mismatches=26;indels=6;unknowns=0;locus=RLOC_00007229
Chr1	stalkie_big_nohaplotig	exon	37613053	37613277	99	+	.	Parent=FBgn0035192.1.mrna1;Target=FBgn0035192.1 1 225 +
Chr1	stalkie_big_nohaplotig	exon	37616872	37617118	99	+	.	Parent=FBgn0035192.1.mrna1;Target=FBgn0035192.1 226 472 +
Chr1	stalkie_big_nohaplotig	exon	37617910	37618036	98	+	.	Parent=FBgn0035192.1.mrna1;Target=FBgn0035192.1 473 599 +
Chr1	stalkie_big_nohaplotig	exon	37618093	37619312	98	+	.	Parent=FBgn0035192.1.mrna1;Target=FBgn0035192.1 600 1813 +
Chr1	stalkie_big_nohaplotig	exon	37619428	37619709	98	+	.	Parent=FBgn0035192.1.mrna1;Target=FBgn0035192.1 1814 2095 +
Chr1	stalkie_big_nohaplotig	exon	37619770	37619969	98	+	.	Parent=FBgn0035192.1.mrna1;Target=FBgn0035192.1 2096 2295 +
Chr1	stalkie_big_nohaplotig	CDS	37613053	37613277	.	+	0	Parent=FBgn0035192.1.mrna1;Target=FBgn0035192.1 1 225 +
Chr1	stalkie_big_nohaplotig	CDS	37616872	37617118	.	+	0	Parent=FBgn0035192.1.mrna1;Target=FBgn0035192.1 226 472 +
Chr1	stalkie_big_nohaplotig	CDS	37617910	37618036	.	+	2	Parent=FBgn0035192.1.mrna1;Target=FBgn0035192.1 473 599 +
Chr1	stalkie_big_nohaplotig	CDS	37618093	37619312	.	+	1	Parent=FBgn0035192.1.mrna1;Target=FBgn0035192.1 600 1813 +
Chr1	stalkie_big_nohaplotig	CDS	37619428	37619709	.	+	2	Parent=FBgn0035192.1.mrna1;Target=FBgn0035192.1 1814 2095 +
Chr1	stalkie_big_nohaplotig	CDS	37619770	37619969	.	+	2	Parent=FBgn0035192.1.mrna1;Target=FBgn0035192.1 2096 2295 +
Chr1	gffcl	locus	37620236	37621318	.	-	.	ID=RLOC_00007230;geneIDs=ORF1492.path1;transcripts=ORF1492.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37620236	37621318	.	-	.	ID=ORF1492.mrna1;geneID=ORF1492.path1;Name=ORF1492;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1083;mismatches=0;indels=0;unknowns=0;Target=ORF1492 1083 1 .;locus=RLOC_00007230
Chr1	stalkie_big_nohaplotig	exon	37620236	37621318	100	-	.	Parent=ORF1492.mrna1
Chr1	stalkie_big_nohaplotig	CDS	37620236	37621318	.	-	0	Parent=ORF1492.mrna1
Chr1	gffcl	locus	37625020	37794052	.	-	.	ID=RLOC_00007231;geneIDs=FBgn0004378.1.path1;transcripts=FBgn0004378.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37625020	37794052	.	-	.	ID=FBgn0004378.1.mrna1;geneID=FBgn0004378.1.path1;Name=FBgn0004378.1;Dir=sensecoverage=100.0;identity=99.8;matches=3325;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007231
Chr1	stalkie_big_nohaplotig	exon	37625020	37625067	100	-	.	Parent=FBgn0004378.1.mrna1;Target=FBgn0004378.1 3283 3330 +
Chr1	stalkie_big_nohaplotig	exon	37625134	37625370	100	-	.	Parent=FBgn0004378.1.mrna1;Target=FBgn0004378.1 3046 3282 +
Chr1	stalkie_big_nohaplotig	exon	37625446	37626659	100	-	.	Parent=FBgn0004378.1.mrna1;Target=FBgn0004378.1 1832 3045 +
Chr1	stalkie_big_nohaplotig	exon	37626720	37626879	100	-	.	Parent=FBgn0004378.1.mrna1;Target=FBgn0004378.1 1672 1831 +
Chr1	stalkie_big_nohaplotig	exon	37626936	37627079	100	-	.	Parent=FBgn0004378.1.mrna1;Target=FBgn0004378.1 1528 1671 +
Chr1	stalkie_big_nohaplotig	exon	37627559	37628004	99	-	.	Parent=FBgn0004378.1.mrna1;Target=FBgn0004378.1 1082 1527 +
Chr1	stalkie_big_nohaplotig	exon	37628070	37628270	99	-	.	Parent=FBgn0004378.1.mrna1;Target=FBgn0004378.1 881 1081 +
Chr1	stalkie_big_nohaplotig	exon	37792822	37793203	100	-	.	Parent=FBgn0004378.1.mrna1;Target=FBgn0004378.1 499 880 +
Chr1	stalkie_big_nohaplotig	exon	37793504	37793804	100	-	.	Parent=FBgn0004378.1.mrna1;Target=FBgn0004378.1 198 498 +
Chr1	stalkie_big_nohaplotig	exon	37793856	37794052	100	-	.	Parent=FBgn0004378.1.mrna1;Target=FBgn0004378.1 1 197 +
Chr1	stalkie_big_nohaplotig	CDS	37625020	37625067	.	-	0	Parent=FBgn0004378.1.mrna1;Target=FBgn0004378.1 3283 3330 +
Chr1	stalkie_big_nohaplotig	CDS	37625134	37625370	.	-	0	Parent=FBgn0004378.1.mrna1;Target=FBgn0004378.1 3046 3282 +
Chr1	stalkie_big_nohaplotig	CDS	37625446	37626659	.	-	2	Parent=FBgn0004378.1.mrna1;Target=FBgn0004378.1 1832 3045 +
Chr1	stalkie_big_nohaplotig	CDS	37626720	37626879	.	-	0	Parent=FBgn0004378.1.mrna1;Target=FBgn0004378.1 1672 1831 +
Chr1	stalkie_big_nohaplotig	CDS	37626936	37627079	.	-	0	Parent=FBgn0004378.1.mrna1;Target=FBgn0004378.1 1528 1671 +
Chr1	stalkie_big_nohaplotig	CDS	37627559	37628004	.	-	2	Parent=FBgn0004378.1.mrna1;Target=FBgn0004378.1 1082 1527 +
Chr1	stalkie_big_nohaplotig	CDS	37628070	37628270	.	-	2	Parent=FBgn0004378.1.mrna1;Target=FBgn0004378.1 881 1081 +
Chr1	stalkie_big_nohaplotig	CDS	37792822	37793203	.	-	0	Parent=FBgn0004378.1.mrna1;Target=FBgn0004378.1 499 880 +
Chr1	stalkie_big_nohaplotig	CDS	37793504	37793804	.	-	1	Parent=FBgn0004378.1.mrna1;Target=FBgn0004378.1 198 498 +
Chr1	stalkie_big_nohaplotig	CDS	37793856	37794052	.	-	0	Parent=FBgn0004378.1.mrna1;Target=FBgn0004378.1 1 197 +
Chr1	gffcl	locus	37718490	37718959	.	+	.	ID=RLOC_00007232;geneIDs=comp145415_c0_seq1.path1;transcripts=comp145415_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37718490	37718959	.	+	.	ID=comp145415_c0_seq1.mrna1;geneID=comp145415_c0_seq1.path1;Name=comp145415_c0_seq1;Dir=indeterminatecoverage=99.8;identity=96.4;matches=459;mismatches=8;indels=9;unknowns=0;Target=comp145415_c0_seq1 474 2 .;CDS_Target=comp145415_c0_seq1 280 2 .;locus=RLOC_00007232
Chr1	stalkie_big_nohaplotig	exon	37718490	37718959	96	+	.	Parent=comp145415_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	37718490	37718765	.	+	0	Parent=comp145415_c0_seq1.mrna1
Chr1	gffcl	locus	37796784	37802613	.	+	.	ID=RLOC_00007233;geneIDs=FBgn0035197.1.path1;transcripts=FBgn0035197.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37796784	37802613	.	+	.	ID=FBgn0035197.1.mrna1;geneID=FBgn0035197.1.path1;Name=FBgn0035197.1;Dir=sensecoverage=100.0;identity=99.9;matches=1709;mismatches=0;indels=1;unknowns=0;locus=RLOC_00007233
Chr1	stalkie_big_nohaplotig	exon	37796784	37797231	100	+	.	Parent=FBgn0035197.1.mrna1;Target=FBgn0035197.1 1 448 +
Chr1	stalkie_big_nohaplotig	exon	37797326	37797754	100	+	.	Parent=FBgn0035197.1.mrna1;Target=FBgn0035197.1 449 877 +
Chr1	stalkie_big_nohaplotig	exon	37797812	37797904	100	+	.	Parent=FBgn0035197.1.mrna1;Target=FBgn0035197.1 878 970 +
Chr1	stalkie_big_nohaplotig	exon	37801068	37801181	100	+	.	Parent=FBgn0035197.1.mrna1;Target=FBgn0035197.1 971 1084 +
Chr1	stalkie_big_nohaplotig	exon	37801912	37802189	100	+	.	Parent=FBgn0035197.1.mrna1;Target=FBgn0035197.1 1085 1362 +
Chr1	stalkie_big_nohaplotig	exon	37802267	37802613	99	+	.	Parent=FBgn0035197.1.mrna1;Target=FBgn0035197.1 1363 1710 +
Chr1	stalkie_big_nohaplotig	CDS	37796784	37797231	.	+	0	Parent=FBgn0035197.1.mrna1;Target=FBgn0035197.1 1 448 +
Chr1	stalkie_big_nohaplotig	CDS	37797326	37797754	.	+	2	Parent=FBgn0035197.1.mrna1;Target=FBgn0035197.1 449 877 +
Chr1	stalkie_big_nohaplotig	CDS	37797812	37797904	.	+	2	Parent=FBgn0035197.1.mrna1;Target=FBgn0035197.1 878 970 +
Chr1	stalkie_big_nohaplotig	CDS	37801068	37801181	.	+	2	Parent=FBgn0035197.1.mrna1;Target=FBgn0035197.1 971 1084 +
Chr1	stalkie_big_nohaplotig	CDS	37801912	37802189	.	+	2	Parent=FBgn0035197.1.mrna1;Target=FBgn0035197.1 1085 1362 +
Chr1	stalkie_big_nohaplotig	CDS	37802267	37802613	.	+	0	Parent=FBgn0035197.1.mrna1;Target=FBgn0035197.1 1363 1710 +
Chr1	gffcl	locus	37814342	37884079	.	+	.	ID=RLOC_00007234;geneIDs=FBgn0035199.1.path1;transcripts=FBgn0035199.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37814342	37884079	.	+	.	ID=FBgn0035199.1.mrna1;geneID=FBgn0035199.1.path1;Name=FBgn0035199.1;Dir=sensecoverage=100.0;identity=100.0;matches=1182;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007234
Chr1	stalkie_big_nohaplotig	exon	37814342	37814564	100	+	.	Parent=FBgn0035199.1.mrna1;Target=FBgn0035199.1 1 223 +
Chr1	stalkie_big_nohaplotig	exon	37834910	37835410	100	+	.	Parent=FBgn0035199.1.mrna1;Target=FBgn0035199.1 224 724 +
Chr1	stalkie_big_nohaplotig	exon	37864997	37865097	100	+	.	Parent=FBgn0035199.1.mrna1;Target=FBgn0035199.1 725 825 +
Chr1	stalkie_big_nohaplotig	exon	37882941	37883049	100	+	.	Parent=FBgn0035199.1.mrna1;Target=FBgn0035199.1 826 934 +
Chr1	stalkie_big_nohaplotig	exon	37883832	37884079	100	+	.	Parent=FBgn0035199.1.mrna1;Target=FBgn0035199.1 935 1182 +
Chr1	stalkie_big_nohaplotig	CDS	37814342	37814564	.	+	0	Parent=FBgn0035199.1.mrna1;Target=FBgn0035199.1 1 223 +
Chr1	stalkie_big_nohaplotig	CDS	37834910	37835410	.	+	2	Parent=FBgn0035199.1.mrna1;Target=FBgn0035199.1 224 724 +
Chr1	stalkie_big_nohaplotig	CDS	37864997	37865097	.	+	2	Parent=FBgn0035199.1.mrna1;Target=FBgn0035199.1 725 825 +
Chr1	stalkie_big_nohaplotig	CDS	37882941	37883049	.	+	0	Parent=FBgn0035199.1.mrna1;Target=FBgn0035199.1 826 934 +
Chr1	stalkie_big_nohaplotig	CDS	37883832	37884079	.	+	2	Parent=FBgn0035199.1.mrna1;Target=FBgn0035199.1 935 1182 +
Chr1	gffcl	locus	37850951	37851417	.	-	.	ID=RLOC_00007235;geneIDs=comp144716_c1_seq1.path2;transcripts=comp144716_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	37850951	37851417	.	-	.	ID=comp144716_c1_seq1.mrna2;geneID=comp144716_c1_seq1.path2;Name=comp144716_c1_seq1;Dir=indeterminatecoverage=69.4;identity=93.4;matches=436;mismatches=11;indels=20;unknowns=0;Target=comp144716_c1_seq1 644 198 .;CDS_Target=comp144716_c1_seq1 320 198 .;locus=RLOC_00007235
Chr1	stalkie_big_nohaplotig	exon	37850951	37851417	93	-	.	Parent=comp144716_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	37851294	37851417	.	-	0	Parent=comp144716_c1_seq1.mrna2
Chr1	gffcl	locus	37934218	37965304	.	.	.	ID=RLOC_00007237;geneIDs=comp152527_c1_seq1.path1,comp157720_c0_seq1.path1;transcripts=comp152527_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37934843	37965304	.	+	.	ID=comp152527_c1_seq1.mrna1;geneID=comp152527_c1_seq1.path1;Name=comp152527_c1_seq1;Dir=indeterminatecoverage=76.2;identity=85.7;matches=581;mismatches=21;indels=76;unknowns=0;Target=comp152527_c1_seq1 69 1 .;locus=RLOC_00007237
Chr1	stalkie_big_nohaplotig	exon	37934843	37935374	89	+	.	Parent=comp152527_c1_seq1.mrna1;Target=comp152527_c1_seq1 571 1 .
Chr1	stalkie_big_nohaplotig	exon	37941878	37941902	47	+	.	Parent=comp152527_c1_seq1.mrna1;Target=comp152527_c1_seq1 605 572 .
Chr1	stalkie_big_nohaplotig	exon	37944266	37944275	100	+	.	Parent=comp152527_c1_seq1.mrna1;Target=comp152527_c1_seq1 807 798 .
Chr1	stalkie_big_nohaplotig	exon	37949090	37949095	25	+	.	Parent=comp152527_c1_seq1.mrna1;Target=comp152527_c1_seq1 827 808 .
Chr1	stalkie_big_nohaplotig	exon	37952345	37952357	100	+	.	Parent=comp152527_c1_seq1.mrna1;Target=comp152527_c1_seq1 840 828 .
Chr1	stalkie_big_nohaplotig	exon	37962008	37962011	100	+	.	Parent=comp152527_c1_seq1.mrna1;Target=comp152527_c1_seq1 844 841 .
Chr1	stalkie_big_nohaplotig	exon	37962017	37962024	100	+	.	Parent=comp152527_c1_seq1.mrna1;Target=comp152527_c1_seq1 912 905 .
Chr1	stalkie_big_nohaplotig	exon	37965294	37965304	90	+	.	Parent=comp152527_c1_seq1.mrna1;Target=comp152527_c1_seq1 923 913 .
Chr1	stalkie_big_nohaplotig	CDS	37934843	37934911	.	+	0	Parent=comp152527_c1_seq1.mrna1
Chr1	gffcl	locus	37938765	37941047	.	+	.	ID=RLOC_00007238;geneIDs=FBgn0262937.1.path1;transcripts=FBgn0262937.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37938765	37941047	.	+	.	ID=FBgn0262937.1.mrna1;geneID=FBgn0262937.1.path1;Name=FBgn0262937.1;Dir=sensecoverage=100.0;identity=99.7;matches=1951;mismatches=4;indels=1;unknowns=0;Target=FBgn0262937.1 3 56 +;locus=RLOC_00007238
Chr1	stalkie_big_nohaplotig	exon	37938765	37938845	98	+	.	Parent=FBgn0262937.1.mrna1;Target=FBgn0262937.1 1 82 +
Chr1	stalkie_big_nohaplotig	exon	37938925	37939240	99	+	.	Parent=FBgn0262937.1.mrna1;Target=FBgn0262937.1 83 398 +
Chr1	stalkie_big_nohaplotig	exon	37939296	37939453	98	+	.	Parent=FBgn0262937.1.mrna1;Target=FBgn0262937.1 399 556 +
Chr1	stalkie_big_nohaplotig	exon	37939528	37939784	100	+	.	Parent=FBgn0262937.1.mrna1;Target=FBgn0262937.1 557 813 +
Chr1	stalkie_big_nohaplotig	exon	37939850	37940092	100	+	.	Parent=FBgn0262937.1.mrna1;Target=FBgn0262937.1 814 1056 +
Chr1	stalkie_big_nohaplotig	exon	37940148	37941047	100	+	.	Parent=FBgn0262937.1.mrna1;Target=FBgn0262937.1 1057 1956 +
Chr1	stalkie_big_nohaplotig	CDS	37938767	37938819	.	+	0	Parent=FBgn0262937.1.mrna1
Chr1	gffcl	locus	37942737	37945357	.	+	.	ID=RLOC_00007239;geneIDs=FBgn0044419.1.path1;transcripts=FBgn0044419.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37942737	37945357	.	+	.	ID=FBgn0044419.1.mrna1;geneID=FBgn0044419.1.path1;Name=FBgn0044419.1;Dir=sensecoverage=100.0;identity=100.0;matches=528;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007239
Chr1	stalkie_big_nohaplotig	exon	37942737	37942768	100	+	.	Parent=FBgn0044419.1.mrna1;Target=FBgn0044419.1 1 32 +
Chr1	stalkie_big_nohaplotig	exon	37943248	37943581	100	+	.	Parent=FBgn0044419.1.mrna1;Target=FBgn0044419.1 33 366 +
Chr1	stalkie_big_nohaplotig	exon	37945196	37945357	100	+	.	Parent=FBgn0044419.1.mrna1;Target=FBgn0044419.1 367 528 +
Chr1	stalkie_big_nohaplotig	CDS	37942737	37942768	.	+	0	Parent=FBgn0044419.1.mrna1;Target=FBgn0044419.1 1 32 +
Chr1	stalkie_big_nohaplotig	CDS	37943248	37943581	.	+	1	Parent=FBgn0044419.1.mrna1;Target=FBgn0044419.1 33 366 +
Chr1	stalkie_big_nohaplotig	CDS	37945196	37945357	.	+	0	Parent=FBgn0044419.1.mrna1;Target=FBgn0044419.1 367 528 +
Chr1	gffcl	locus	37948014	37948785	.	+	.	ID=RLOC_00007240;geneIDs=comp147725_c0_seq1.path2;transcripts=comp147725_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	37948014	37948785	.	+	.	ID=comp147725_c0_seq1.mrna2;geneID=comp147725_c0_seq1.path2;Name=comp147725_c0_seq1;Dir=indeterminatecoverage=59.8;identity=99.0;matches=764;mismatches=5;indels=3;unknowns=0;Target=comp147725_c0_seq1 1285 517 .;CDS_Target=comp147725_c0_seq1 745 517 .;locus=RLOC_00007240
Chr1	stalkie_big_nohaplotig	exon	37948014	37948785	98	+	.	Parent=comp147725_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	37948014	37948242	.	+	2	Parent=comp147725_c0_seq1.mrna2
Chr1	gffcl	locus	37948932	37953807	.	+	.	ID=RLOC_00007241;geneIDs=FBgn0260458.1.path1;transcripts=FBgn0260458.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37948932	37953807	.	+	.	ID=FBgn0260458.1.mrna1;geneID=FBgn0260458.1.path1;Name=FBgn0260458.1;Dir=sensecoverage=100.0;identity=100.0;matches=987;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007241
Chr1	stalkie_big_nohaplotig	exon	37948932	37949046	100	+	.	Parent=FBgn0260458.1.mrna1;Target=FBgn0260458.1 1 115 +
Chr1	stalkie_big_nohaplotig	exon	37952659	37953000	100	+	.	Parent=FBgn0260458.1.mrna1;Target=FBgn0260458.1 116 457 +
Chr1	stalkie_big_nohaplotig	exon	37953136	37953317	100	+	.	Parent=FBgn0260458.1.mrna1;Target=FBgn0260458.1 458 639 +
Chr1	stalkie_big_nohaplotig	exon	37953388	37953532	100	+	.	Parent=FBgn0260458.1.mrna1;Target=FBgn0260458.1 640 784 +
Chr1	stalkie_big_nohaplotig	exon	37953605	37953807	100	+	.	Parent=FBgn0260458.1.mrna1;Target=FBgn0260458.1 785 987 +
Chr1	stalkie_big_nohaplotig	CDS	37948932	37949046	.	+	0	Parent=FBgn0260458.1.mrna1;Target=FBgn0260458.1 1 115 +
Chr1	stalkie_big_nohaplotig	CDS	37952659	37953000	.	+	2	Parent=FBgn0260458.1.mrna1;Target=FBgn0260458.1 116 457 +
Chr1	stalkie_big_nohaplotig	CDS	37953136	37953317	.	+	2	Parent=FBgn0260458.1.mrna1;Target=FBgn0260458.1 458 639 +
Chr1	stalkie_big_nohaplotig	CDS	37953388	37953532	.	+	0	Parent=FBgn0260458.1.mrna1;Target=FBgn0260458.1 640 784 +
Chr1	stalkie_big_nohaplotig	CDS	37953605	37953807	.	+	2	Parent=FBgn0260458.1.mrna1;Target=FBgn0260458.1 785 987 +
Chr1	gffcl	locus	37954049	37955065	.	-	.	ID=RLOC_00007242;geneIDs=FBgn0035636.1.path1;transcripts=FBgn0035636.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37954049	37955065	.	-	.	ID=FBgn0035636.1.mrna1;geneID=FBgn0035636.1.path1;Name=FBgn0035636.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1017;mismatches=0;indels=0;unknowns=0;Target=FBgn0035636.1 1017 1 .;locus=RLOC_00007242
Chr1	stalkie_big_nohaplotig	exon	37954049	37955065	100	-	.	Parent=FBgn0035636.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	37954049	37955065	.	-	0	Parent=FBgn0035636.1.mrna1
Chr1	gffcl	locus	37957672	37958730	.	+	.	ID=RLOC_00007243;geneIDs=comp148500_c0_seq1.path1;transcripts=comp148500_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37957672	37958730	.	+	.	ID=comp148500_c0_seq1.mrna1;geneID=comp148500_c0_seq1.path1;Name=comp148500_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=953;mismatches=0;indels=0;unknowns=0;Target=comp148500_c0_seq1 318 479 .;locus=RLOC_00007243
Chr1	stalkie_big_nohaplotig	exon	37957672	37957974	100	+	.	Parent=comp148500_c0_seq1.mrna1;Target=comp148500_c0_seq1 651 953 -
Chr1	stalkie_big_nohaplotig	exon	37958081	37958730	100	+	.	Parent=comp148500_c0_seq1.mrna1;Target=comp148500_c0_seq1 1 650 -
Chr1	stalkie_big_nohaplotig	CDS	37958252	37958413	.	+	0	Parent=comp148500_c0_seq1.mrna1
Chr1	gffcl	locus	37975743	37978375	.	-	.	ID=RLOC_00007244;geneIDs=FBgn0035769.1.path1;transcripts=FBgn0035769.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37975743	37978375	.	-	.	ID=FBgn0035769.1.mrna1;geneID=FBgn0035769.1.path1;Name=FBgn0035769.1;Dir=sensecoverage=100.0;identity=100.0;matches=2088;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007244
Chr1	stalkie_big_nohaplotig	exon	37975743	37975811	100	-	.	Parent=FBgn0035769.1.mrna1;Target=FBgn0035769.1 2020 2088 +
Chr1	stalkie_big_nohaplotig	exon	37976157	37976203	100	-	.	Parent=FBgn0035769.1.mrna1;Target=FBgn0035769.1 1973 2019 +
Chr1	stalkie_big_nohaplotig	exon	37976270	37976976	100	-	.	Parent=FBgn0035769.1.mrna1;Target=FBgn0035769.1 1266 1972 +
Chr1	stalkie_big_nohaplotig	exon	37977044	37977965	100	-	.	Parent=FBgn0035769.1.mrna1;Target=FBgn0035769.1 344 1265 +
Chr1	stalkie_big_nohaplotig	exon	37978033	37978375	100	-	.	Parent=FBgn0035769.1.mrna1;Target=FBgn0035769.1 1 343 +
Chr1	stalkie_big_nohaplotig	CDS	37975743	37975811	.	-	0	Parent=FBgn0035769.1.mrna1;Target=FBgn0035769.1 2020 2088 +
Chr1	stalkie_big_nohaplotig	CDS	37976157	37976203	.	-	2	Parent=FBgn0035769.1.mrna1;Target=FBgn0035769.1 1973 2019 +
Chr1	stalkie_big_nohaplotig	CDS	37976270	37976976	.	-	1	Parent=FBgn0035769.1.mrna1;Target=FBgn0035769.1 1266 1972 +
Chr1	stalkie_big_nohaplotig	CDS	37977044	37977965	.	-	2	Parent=FBgn0035769.1.mrna1;Target=FBgn0035769.1 344 1265 +
Chr1	stalkie_big_nohaplotig	CDS	37978033	37978375	.	-	0	Parent=FBgn0035769.1.mrna1;Target=FBgn0035769.1 1 343 +
Chr1	gffcl	locus	37981830	37983319	.	+	.	ID=RLOC_00007245;geneIDs=FBgn0002638.1.path1;transcripts=FBgn0002638.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37981830	37983319	.	+	.	ID=FBgn0002638.1.mrna1;geneID=FBgn0002638.1.path1;Name=FBgn0002638.1;Dir=sensecoverage=100.0;identity=100.0;matches=1434;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007245
Chr1	stalkie_big_nohaplotig	exon	37981830	37982508	100	+	.	Parent=FBgn0002638.1.mrna1;Target=FBgn0002638.1 1 679 +
Chr1	stalkie_big_nohaplotig	exon	37982565	37983319	100	+	.	Parent=FBgn0002638.1.mrna1;Target=FBgn0002638.1 680 1434 +
Chr1	stalkie_big_nohaplotig	CDS	37981830	37982508	.	+	0	Parent=FBgn0002638.1.mrna1;Target=FBgn0002638.1 1 679 +
Chr1	stalkie_big_nohaplotig	CDS	37982565	37983319	.	+	2	Parent=FBgn0002638.1.mrna1;Target=FBgn0002638.1 680 1434 +
Chr1	gffcl	locus	37985118	37988029	.	-	.	ID=RLOC_00007246;geneIDs=comp143097_c0_seq1.path1;transcripts=comp143097_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37985118	37988029	.	-	.	ID=comp143097_c0_seq1.mrna1;geneID=comp143097_c0_seq1.path1;Name=comp143097_c0_seq1;Dir=antisensecoverage=96.3;identity=99.8;matches=1053;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007246
Chr1	stalkie_big_nohaplotig	exon	37985118	37985589	99	-	.	Parent=comp143097_c0_seq1.mrna1;Target=comp143097_c0_seq1 41 512 -
Chr1	stalkie_big_nohaplotig	exon	37987383	37987733	100	-	.	Parent=comp143097_c0_seq1.mrna1;Target=comp143097_c0_seq1 513 863 -
Chr1	stalkie_big_nohaplotig	exon	37987798	37988029	100	-	.	Parent=comp143097_c0_seq1.mrna1;Target=comp143097_c0_seq1 864 1095 -
Chr1	stalkie_big_nohaplotig	CDS	37985374	37985589	.	-	0	Parent=comp143097_c0_seq1.mrna1;Target=comp143097_c0_seq1 297 512 .
Chr1	stalkie_big_nohaplotig	CDS	37987383	37987733	.	-	0	Parent=comp143097_c0_seq1.mrna1;Target=comp143097_c0_seq1 513 863 .
Chr1	stalkie_big_nohaplotig	CDS	37987798	37987896	.	-	0	Parent=comp143097_c0_seq1.mrna1;Target=comp143097_c0_seq1 864 962 .
Chr1	gffcl	locus	37990825	37992288	.	-	.	ID=RLOC_00007247;geneIDs=ORF2455.path1;transcripts=ORF2455.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37990825	37992288	.	-	.	ID=ORF2455.mrna1;geneID=ORF2455.path1;Name=ORF2455;Dir=sensecoverage=100.0;identity=100.0;matches=855;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007247
Chr1	stalkie_big_nohaplotig	exon	37990825	37991096	100	-	.	Parent=ORF2455.mrna1;Target=ORF2455 584 855 +
Chr1	stalkie_big_nohaplotig	exon	37991169	37991256	100	-	.	Parent=ORF2455.mrna1;Target=ORF2455 496 583 +
Chr1	stalkie_big_nohaplotig	exon	37991728	37992099	100	-	.	Parent=ORF2455.mrna1;Target=ORF2455 124 495 +
Chr1	stalkie_big_nohaplotig	exon	37992166	37992288	100	-	.	Parent=ORF2455.mrna1;Target=ORF2455 1 123 +
Chr1	stalkie_big_nohaplotig	CDS	37990825	37991096	.	-	2	Parent=ORF2455.mrna1;Target=ORF2455 584 855 +
Chr1	stalkie_big_nohaplotig	CDS	37991169	37991256	.	-	0	Parent=ORF2455.mrna1;Target=ORF2455 496 583 +
Chr1	stalkie_big_nohaplotig	CDS	37991728	37992099	.	-	0	Parent=ORF2455.mrna1;Target=ORF2455 124 495 +
Chr1	stalkie_big_nohaplotig	CDS	37992166	37992288	.	-	0	Parent=ORF2455.mrna1;Target=ORF2455 1 123 +
Chr1	gffcl	locus	37996015	37997946	.	-	.	ID=RLOC_00007248;geneIDs=FBgn0053523.1.path1;transcripts=FBgn0053523.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37996015	37997946	.	-	.	ID=FBgn0053523.1.mrna1;geneID=FBgn0053523.1.path1;Name=FBgn0053523.1;Dir=sensecoverage=100.0;identity=100.0;matches=651;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007248
Chr1	stalkie_big_nohaplotig	exon	37996015	37996209	100	-	.	Parent=FBgn0053523.1.mrna1;Target=FBgn0053523.1 457 651 +
Chr1	stalkie_big_nohaplotig	exon	37997429	37997776	100	-	.	Parent=FBgn0053523.1.mrna1;Target=FBgn0053523.1 109 456 +
Chr1	stalkie_big_nohaplotig	exon	37997839	37997946	100	-	.	Parent=FBgn0053523.1.mrna1;Target=FBgn0053523.1 1 108 +
Chr1	stalkie_big_nohaplotig	CDS	37996015	37996209	.	-	0	Parent=FBgn0053523.1.mrna1;Target=FBgn0053523.1 457 651 +
Chr1	stalkie_big_nohaplotig	CDS	37997429	37997776	.	-	0	Parent=FBgn0053523.1.mrna1;Target=FBgn0053523.1 109 456 +
Chr1	stalkie_big_nohaplotig	CDS	37997839	37997946	.	-	0	Parent=FBgn0053523.1.mrna1;Target=FBgn0053523.1 1 108 +
Chr1	gffcl	locus	37999841	38005212	.	-	.	ID=RLOC_00007249;geneIDs=ORF402.path1;transcripts=ORF402.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	37999841	38005212	.	-	.	ID=ORF402.mrna1;geneID=ORF402.path1;Name=ORF402;Dir=sensecoverage=100.0;identity=100.0;matches=1890;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007249
Chr1	stalkie_big_nohaplotig	exon	37999841	38000107	100	-	.	Parent=ORF402.mrna1;Target=ORF402 1624 1890 +
Chr1	stalkie_big_nohaplotig	exon	38001659	38002183	100	-	.	Parent=ORF402.mrna1;Target=ORF402 1099 1623 +
Chr1	stalkie_big_nohaplotig	exon	38002278	38002387	100	-	.	Parent=ORF402.mrna1;Target=ORF402 989 1098 +
Chr1	stalkie_big_nohaplotig	exon	38002525	38002573	100	-	.	Parent=ORF402.mrna1;Target=ORF402 940 988 +
Chr1	stalkie_big_nohaplotig	exon	38004223	38004966	100	-	.	Parent=ORF402.mrna1;Target=ORF402 196 939 +
Chr1	stalkie_big_nohaplotig	exon	38005018	38005212	100	-	.	Parent=ORF402.mrna1;Target=ORF402 1 195 +
Chr1	stalkie_big_nohaplotig	CDS	37999841	38000107	.	-	0	Parent=ORF402.mrna1;Target=ORF402 1624 1890 +
Chr1	stalkie_big_nohaplotig	CDS	38001659	38002183	.	-	0	Parent=ORF402.mrna1;Target=ORF402 1099 1623 +
Chr1	stalkie_big_nohaplotig	CDS	38002278	38002387	.	-	2	Parent=ORF402.mrna1;Target=ORF402 989 1098 +
Chr1	stalkie_big_nohaplotig	CDS	38002525	38002573	.	-	0	Parent=ORF402.mrna1;Target=ORF402 940 988 +
Chr1	stalkie_big_nohaplotig	CDS	38004223	38004966	.	-	0	Parent=ORF402.mrna1;Target=ORF402 196 939 +
Chr1	stalkie_big_nohaplotig	CDS	38005018	38005212	.	-	0	Parent=ORF402.mrna1;Target=ORF402 1 195 +
Chr1	gffcl	locus	38004983	38107648	.	-	.	ID=RLOC_00007250;geneIDs=comp163458_c0_seq1.path1;transcripts=comp163458_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38004983	38107648	.	-	.	ID=comp163458_c0_seq1.mrna1;geneID=comp163458_c0_seq1.path1;Name=comp163458_c0_seq1;Dir=indeterminatecoverage=28.5;identity=98.7;matches=1049;mismatches=14;indels=0;unknowns=0;locus=RLOC_00007250
Chr1	stalkie_big_nohaplotig	exon	38004983	38004993	100	-	.	Parent=comp163458_c0_seq1.mrna1;Target=comp163458_c0_seq1 3522 3512 .
Chr1	stalkie_big_nohaplotig	exon	38005239	38005242	100	-	.	Parent=comp163458_c0_seq1.mrna1;Target=comp163458_c0_seq1 3511 3508 .
Chr1	stalkie_big_nohaplotig	exon	38020195	38020204	100	-	.	Parent=comp163458_c0_seq1.mrna1;Target=comp163458_c0_seq1 3507 3498 .
Chr1	stalkie_big_nohaplotig	exon	38029652	38029653	100	-	.	Parent=comp163458_c0_seq1.mrna1;Target=comp163458_c0_seq1 3497 3496 .
Chr1	stalkie_big_nohaplotig	exon	38031049	38031050	100	-	.	Parent=comp163458_c0_seq1.mrna1;Target=comp163458_c0_seq1 3495 3494 .
Chr1	stalkie_big_nohaplotig	exon	38031648	38031656	100	-	.	Parent=comp163458_c0_seq1.mrna1;Target=comp163458_c0_seq1 3493 3485 .
Chr1	stalkie_big_nohaplotig	exon	38035990	38035992	100	-	.	Parent=comp163458_c0_seq1.mrna1;Target=comp163458_c0_seq1 3484 3482 .
Chr1	stalkie_big_nohaplotig	exon	38041164	38041170	100	-	.	Parent=comp163458_c0_seq1.mrna1;Target=comp163458_c0_seq1 3481 3475 .
Chr1	stalkie_big_nohaplotig	exon	38043804	38043806	100	-	.	Parent=comp163458_c0_seq1.mrna1;Target=comp163458_c0_seq1 3474 3472 .
Chr1	stalkie_big_nohaplotig	exon	38046938	38046943	100	-	.	Parent=comp163458_c0_seq1.mrna1;Target=comp163458_c0_seq1 3471 3466 .
Chr1	stalkie_big_nohaplotig	exon	38062539	38062540	100	-	.	Parent=comp163458_c0_seq1.mrna1;Target=comp163458_c0_seq1 3465 3464 .
Chr1	stalkie_big_nohaplotig	exon	38069066	38070047	98	-	.	Parent=comp163458_c0_seq1.mrna1;Target=comp163458_c0_seq1 3463 2482 .
Chr1	stalkie_big_nohaplotig	exon	38104948	38104954	100	-	.	Parent=comp163458_c0_seq1.mrna1;Target=comp163458_c0_seq1 2481 2475 .
Chr1	stalkie_big_nohaplotig	exon	38106591	38106595	100	-	.	Parent=comp163458_c0_seq1.mrna1;Target=comp163458_c0_seq1 2474 2470 .
Chr1	stalkie_big_nohaplotig	exon	38107639	38107648	100	-	.	Parent=comp163458_c0_seq1.mrna1;Target=comp163458_c0_seq1 2469 2460 .
Chr1	stalkie_big_nohaplotig	CDS	38069080	38070047	.	-	2	Parent=comp163458_c0_seq1.mrna1;Target=comp163458_c0_seq1 3449 2482 .
Chr1	stalkie_big_nohaplotig	CDS	38104948	38104954	.	-	0	Parent=comp163458_c0_seq1.mrna1;Target=comp163458_c0_seq1 2481 2475 .
Chr1	stalkie_big_nohaplotig	CDS	38106591	38106595	.	-	2	Parent=comp163458_c0_seq1.mrna1;Target=comp163458_c0_seq1 2474 2470 .
Chr1	stalkie_big_nohaplotig	CDS	38107639	38107648	.	-	0	Parent=comp163458_c0_seq1.mrna1;Target=comp163458_c0_seq1 2469 2460 .
Chr1	gffcl	locus	38009750	38010184	.	-	.	ID=RLOC_00007251;geneIDs=comp151390_c0_seq1.path1;transcripts=comp151390_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38009750	38010184	.	-	.	ID=comp151390_c0_seq1.mrna1;geneID=comp151390_c0_seq1.path1;Name=comp151390_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=430;mismatches=5;indels=8;unknowns=0;Target=comp151390_c0_seq1 443 1 .;CDS_Target=comp151390_c0_seq1 214 158 .;locus=RLOC_00007251
Chr1	stalkie_big_nohaplotig	exon	38009750	38010184	97	-	.	Parent=comp151390_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	38009978	38010034	.	-	0	Parent=comp151390_c0_seq1.mrna1
Chr1	gffcl	locus	38010905	38022376	.	-	.	ID=RLOC_00007252;geneIDs=FBgn0053523.2.path1;transcripts=FBgn0053523.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38010905	38022376	.	-	.	ID=FBgn0053523.2.mrna1;geneID=FBgn0053523.2.path1;Name=FBgn0053523.2;Dir=sensecoverage=100.0;identity=100.0;matches=1674;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007252
Chr1	stalkie_big_nohaplotig	exon	38010905	38011108	100	-	.	Parent=FBgn0053523.2.mrna1;Target=FBgn0053523.2 1471 1674 +
Chr1	stalkie_big_nohaplotig	exon	38011753	38012109	100	-	.	Parent=FBgn0053523.2.mrna1;Target=FBgn0053523.2 1114 1470 +
Chr1	stalkie_big_nohaplotig	exon	38012175	38012284	100	-	.	Parent=FBgn0053523.2.mrna1;Target=FBgn0053523.2 1004 1113 +
Chr1	stalkie_big_nohaplotig	exon	38012438	38012513	100	-	.	Parent=FBgn0053523.2.mrna1;Target=FBgn0053523.2 928 1003 +
Chr1	stalkie_big_nohaplotig	exon	38016499	38016782	100	-	.	Parent=FBgn0053523.2.mrna1;Target=FBgn0053523.2 644 927 +
Chr1	stalkie_big_nohaplotig	exon	38016849	38017337	100	-	.	Parent=FBgn0053523.2.mrna1;Target=FBgn0053523.2 155 643 +
Chr1	stalkie_big_nohaplotig	exon	38022223	38022376	100	-	.	Parent=FBgn0053523.2.mrna1;Target=FBgn0053523.2 1 154 +
Chr1	stalkie_big_nohaplotig	CDS	38010905	38011108	.	-	0	Parent=FBgn0053523.2.mrna1;Target=FBgn0053523.2 1471 1674 +
Chr1	stalkie_big_nohaplotig	CDS	38011753	38012109	.	-	0	Parent=FBgn0053523.2.mrna1;Target=FBgn0053523.2 1114 1470 +
Chr1	stalkie_big_nohaplotig	CDS	38012175	38012284	.	-	2	Parent=FBgn0053523.2.mrna1;Target=FBgn0053523.2 1004 1113 +
Chr1	stalkie_big_nohaplotig	CDS	38012438	38012513	.	-	0	Parent=FBgn0053523.2.mrna1;Target=FBgn0053523.2 928 1003 +
Chr1	stalkie_big_nohaplotig	CDS	38016499	38016782	.	-	2	Parent=FBgn0053523.2.mrna1;Target=FBgn0053523.2 644 927 +
Chr1	stalkie_big_nohaplotig	CDS	38016849	38017337	.	-	2	Parent=FBgn0053523.2.mrna1;Target=FBgn0053523.2 155 643 +
Chr1	stalkie_big_nohaplotig	CDS	38022223	38022376	.	-	0	Parent=FBgn0053523.2.mrna1;Target=FBgn0053523.2 1 154 +
Chr1	gffcl	locus	38028272	38032644	.	+	.	ID=RLOC_00007253;geneIDs=FBgn0035649.1.path1;transcripts=FBgn0035649.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38028272	38032644	.	+	.	ID=FBgn0035649.1.mrna1;geneID=FBgn0035649.1.path1;Name=FBgn0035649.1;Dir=sensecoverage=100.0;identity=100.0;matches=2135;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007253
Chr1	stalkie_big_nohaplotig	exon	38028272	38028475	99	+	.	Parent=FBgn0035649.1.mrna1;Target=FBgn0035649.1 1 204 +
Chr1	stalkie_big_nohaplotig	exon	38029738	38030926	100	+	.	Parent=FBgn0035649.1.mrna1;Target=FBgn0035649.1 205 1393 +
Chr1	stalkie_big_nohaplotig	exon	38030997	38031191	100	+	.	Parent=FBgn0035649.1.mrna1;Target=FBgn0035649.1 1394 1588 +
Chr1	stalkie_big_nohaplotig	exon	38031854	38032023	100	+	.	Parent=FBgn0035649.1.mrna1;Target=FBgn0035649.1 1589 1758 +
Chr1	stalkie_big_nohaplotig	exon	38032157	38032399	100	+	.	Parent=FBgn0035649.1.mrna1;Target=FBgn0035649.1 1759 2001 +
Chr1	stalkie_big_nohaplotig	exon	38032510	38032644	100	+	.	Parent=FBgn0035649.1.mrna1;Target=FBgn0035649.1 2002 2136 +
Chr1	stalkie_big_nohaplotig	CDS	38028272	38028475	.	+	0	Parent=FBgn0035649.1.mrna1;Target=FBgn0035649.1 1 204 +
Chr1	stalkie_big_nohaplotig	CDS	38029738	38030926	.	+	0	Parent=FBgn0035649.1.mrna1;Target=FBgn0035649.1 205 1393 +
Chr1	stalkie_big_nohaplotig	CDS	38030997	38031191	.	+	2	Parent=FBgn0035649.1.mrna1;Target=FBgn0035649.1 1394 1588 +
Chr1	stalkie_big_nohaplotig	CDS	38031854	38032023	.	+	2	Parent=FBgn0035649.1.mrna1;Target=FBgn0035649.1 1589 1758 +
Chr1	stalkie_big_nohaplotig	CDS	38032157	38032399	.	+	0	Parent=FBgn0035649.1.mrna1;Target=FBgn0035649.1 1759 2001 +
Chr1	stalkie_big_nohaplotig	CDS	38032510	38032644	.	+	0	Parent=FBgn0035649.1.mrna1;Target=FBgn0035649.1 2002 2136 +
Chr1	gffcl	locus	38042634	38042923	.	-	.	ID=RLOC_00007254;geneIDs=comp146405_c1_seq1.path1;transcripts=comp146405_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38042634	38042923	.	-	.	ID=comp146405_c1_seq1.mrna1;geneID=comp146405_c1_seq1.path1;Name=comp146405_c1_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=237;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007254
Chr1	stalkie_big_nohaplotig	exon	38042634	38042724	100	-	.	Parent=comp146405_c1_seq1.mrna1;Target=comp146405_c1_seq1 147 237 +
Chr1	stalkie_big_nohaplotig	exon	38042778	38042923	100	-	.	Parent=comp146405_c1_seq1.mrna1;Target=comp146405_c1_seq1 1 146 +
Chr1	stalkie_big_nohaplotig	CDS	38042635	38042724	.	-	0	Parent=comp146405_c1_seq1.mrna1;Target=comp146405_c1_seq1 147 236 +
Chr1	stalkie_big_nohaplotig	CDS	38042778	38042831	.	-	0	Parent=comp146405_c1_seq1.mrna1;Target=comp146405_c1_seq1 93 146 +
Chr1	gffcl	locus	38091895	38094850	.	+	.	ID=RLOC_00007255;geneIDs=FBgn0040038.1.path1;transcripts=FBgn0040038.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38091895	38094850	.	+	.	ID=FBgn0040038.1.mrna1;geneID=FBgn0040038.1.path1;Name=FBgn0040038.1;Dir=sensecoverage=100.0;identity=100.0;matches=1923;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007255
Chr1	stalkie_big_nohaplotig	exon	38091895	38091916	100	+	.	Parent=FBgn0040038.1.mrna1;Target=FBgn0040038.1 1 22 +
Chr1	stalkie_big_nohaplotig	exon	38092489	38092738	100	+	.	Parent=FBgn0040038.1.mrna1;Target=FBgn0040038.1 23 272 +
Chr1	stalkie_big_nohaplotig	exon	38092797	38093060	100	+	.	Parent=FBgn0040038.1.mrna1;Target=FBgn0040038.1 273 536 +
Chr1	stalkie_big_nohaplotig	exon	38093120	38093384	100	+	.	Parent=FBgn0040038.1.mrna1;Target=FBgn0040038.1 537 801 +
Chr1	stalkie_big_nohaplotig	exon	38093447	38093532	100	+	.	Parent=FBgn0040038.1.mrna1;Target=FBgn0040038.1 802 887 +
Chr1	stalkie_big_nohaplotig	exon	38093590	38093908	100	+	.	Parent=FBgn0040038.1.mrna1;Target=FBgn0040038.1 888 1206 +
Chr1	stalkie_big_nohaplotig	exon	38093968	38094178	100	+	.	Parent=FBgn0040038.1.mrna1;Target=FBgn0040038.1 1207 1417 +
Chr1	stalkie_big_nohaplotig	exon	38094286	38094631	100	+	.	Parent=FBgn0040038.1.mrna1;Target=FBgn0040038.1 1418 1763 +
Chr1	stalkie_big_nohaplotig	exon	38094691	38094850	100	+	.	Parent=FBgn0040038.1.mrna1;Target=FBgn0040038.1 1764 1923 +
Chr1	stalkie_big_nohaplotig	CDS	38091895	38091916	.	+	0	Parent=FBgn0040038.1.mrna1;Target=FBgn0040038.1 1 22 +
Chr1	stalkie_big_nohaplotig	CDS	38092489	38092738	.	+	2	Parent=FBgn0040038.1.mrna1;Target=FBgn0040038.1 23 272 +
Chr1	stalkie_big_nohaplotig	CDS	38092797	38093060	.	+	1	Parent=FBgn0040038.1.mrna1;Target=FBgn0040038.1 273 536 +
Chr1	stalkie_big_nohaplotig	CDS	38093120	38093384	.	+	1	Parent=FBgn0040038.1.mrna1;Target=FBgn0040038.1 537 801 +
Chr1	stalkie_big_nohaplotig	CDS	38093447	38093532	.	+	0	Parent=FBgn0040038.1.mrna1;Target=FBgn0040038.1 802 887 +
Chr1	stalkie_big_nohaplotig	CDS	38093590	38093908	.	+	1	Parent=FBgn0040038.1.mrna1;Target=FBgn0040038.1 888 1206 +
Chr1	stalkie_big_nohaplotig	CDS	38093968	38094178	.	+	0	Parent=FBgn0040038.1.mrna1;Target=FBgn0040038.1 1207 1417 +
Chr1	stalkie_big_nohaplotig	CDS	38094286	38094631	.	+	2	Parent=FBgn0040038.1.mrna1;Target=FBgn0040038.1 1418 1763 +
Chr1	stalkie_big_nohaplotig	CDS	38094691	38094850	.	+	1	Parent=FBgn0040038.1.mrna1;Target=FBgn0040038.1 1764 1923 +
Chr1	gffcl	locus	38097597	38103914	.	-	.	ID=RLOC_00007256;geneIDs=FBgn0263199.1.path1;transcripts=FBgn0263199.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38097597	38103914	.	-	.	ID=FBgn0263199.1.mrna1;geneID=FBgn0263199.1.path1;Name=FBgn0263199.1;Dir=sensecoverage=100.0;identity=99.9;matches=1630;mismatches=2;indels=0;unknowns=3;locus=RLOC_00007256
Chr1	stalkie_big_nohaplotig	exon	38097597	38097798	100	-	.	Parent=FBgn0263199.1.mrna1;Target=FBgn0263199.1 1434 1635 +
Chr1	stalkie_big_nohaplotig	exon	38097867	38098140	100	-	.	Parent=FBgn0263199.1.mrna1;Target=FBgn0263199.1 1160 1433 +
Chr1	stalkie_big_nohaplotig	exon	38098207	38098940	100	-	.	Parent=FBgn0263199.1.mrna1;Target=FBgn0263199.1 426 1159 +
Chr1	stalkie_big_nohaplotig	exon	38098998	38099171	100	-	.	Parent=FBgn0263199.1.mrna1;Target=FBgn0263199.1 252 425 +
Chr1	stalkie_big_nohaplotig	exon	38103515	38103705	100	-	.	Parent=FBgn0263199.1.mrna1;Target=FBgn0263199.1 61 251 +
Chr1	stalkie_big_nohaplotig	exon	38103855	38103914	96	-	.	Parent=FBgn0263199.1.mrna1;Target=FBgn0263199.1 1 60 +
Chr1	stalkie_big_nohaplotig	CDS	38097597	38097798	.	-	1	Parent=FBgn0263199.1.mrna1;Target=FBgn0263199.1 1434 1635 +
Chr1	stalkie_big_nohaplotig	CDS	38097867	38098140	.	-	2	Parent=FBgn0263199.1.mrna1;Target=FBgn0263199.1 1160 1433 +
Chr1	stalkie_big_nohaplotig	CDS	38098207	38098940	.	-	1	Parent=FBgn0263199.1.mrna1;Target=FBgn0263199.1 426 1159 +
Chr1	stalkie_big_nohaplotig	CDS	38098998	38099171	.	-	1	Parent=FBgn0263199.1.mrna1;Target=FBgn0263199.1 252 425 +
Chr1	stalkie_big_nohaplotig	CDS	38103515	38103705	.	-	0	Parent=FBgn0263199.1.mrna1;Target=FBgn0263199.1 61 251 +
Chr1	stalkie_big_nohaplotig	CDS	38103855	38103914	.	-	0	Parent=FBgn0263199.1.mrna1;Target=FBgn0263199.1 1 60 +
Chr1	gffcl	locus	38140129	38144771	.	+	.	ID=RLOC_00007257;geneIDs=comp75307_c0_seq1.path1,comp155800_c0_seq1.path1;transcripts=comp155800_c0_seq1.mrna1,comp75307_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38140129	38140984	.	+	.	ID=comp155800_c0_seq1.mrna1;geneID=comp155800_c0_seq1.path1;Name=comp155800_c0_seq1;Dir=sensecoverage=99.4;identity=99.1;matches=775;mismatches=7;indels=0;unknowns=0;Target=comp155800_c0_seq1 156 350 +;locus=RLOC_00007257
Chr1	stalkie_big_nohaplotig	exon	38140129	38140793	99	+	.	Parent=comp155800_c0_seq1.mrna1;Target=comp155800_c0_seq1 6 670 +
Chr1	stalkie_big_nohaplotig	exon	38140868	38140984	96	+	.	Parent=comp155800_c0_seq1.mrna1;Target=comp155800_c0_seq1 671 787 +
Chr1	stalkie_big_nohaplotig	CDS	38140279	38140473	.	+	0	Parent=comp155800_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38140770	38144771	.	+	.	ID=comp75307_c0_seq1.mrna1;geneID=comp75307_c0_seq1.path1;Name=comp75307_c0_seq1;Dir=sensecoverage=99.9;identity=99.0;matches=689;mismatches=6;indels=1;unknowns=0;Target=comp75307_c0_seq1 123 221 +;locus=RLOC_00007257
Chr1	stalkie_big_nohaplotig	exon	38140770	38140793	100	+	.	Parent=comp75307_c0_seq1.mrna1;Target=comp75307_c0_seq1 1 24 +
Chr1	stalkie_big_nohaplotig	exon	38144101	38144771	98	+	.	Parent=comp75307_c0_seq1.mrna1;Target=comp75307_c0_seq1 25 696 +
Chr1	stalkie_big_nohaplotig	CDS	38144199	38144296	.	+	0	Parent=comp75307_c0_seq1.mrna1
Chr1	gffcl	locus	38206794	38207561	.	-	.	ID=RLOC_00007258;geneIDs=FBgn0052270.1.path1;transcripts=FBgn0052270.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38206794	38207561	.	-	.	ID=FBgn0052270.1.mrna1;geneID=FBgn0052270.1.path1;Name=FBgn0052270.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=763;mismatches=5;indels=0;unknowns=0;Target=FBgn0052270.1 768 1 .;locus=RLOC_00007258
Chr1	stalkie_big_nohaplotig	exon	38206794	38207561	99	-	.	Parent=FBgn0052270.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	38206794	38207561	.	-	0	Parent=FBgn0052270.1.mrna1
Chr1	gffcl	locus	38348039	38387741	.	-	.	ID=RLOC_00007259;geneIDs=FBgn0014343.1.path1,comp160868_c1_seq1.path1;transcripts=FBgn0014343.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38348349	38387741	.	-	.	ID=FBgn0014343.1.mrna1;geneID=FBgn0014343.1.path1;Name=FBgn0014343.1;Dir=sensecoverage=100.0;identity=99.9;matches=2062;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007259
Chr1	stalkie_big_nohaplotig	exon	38348349	38349316	99	-	.	Parent=FBgn0014343.1.mrna1;Target=FBgn0014343.1 1097 2064 +
Chr1	stalkie_big_nohaplotig	exon	38350231	38350529	99	-	.	Parent=FBgn0014343.1.mrna1;Target=FBgn0014343.1 798 1096 +
Chr1	stalkie_big_nohaplotig	exon	38357120	38357220	100	-	.	Parent=FBgn0014343.1.mrna1;Target=FBgn0014343.1 697 797 +
Chr1	stalkie_big_nohaplotig	exon	38375553	38376206	100	-	.	Parent=FBgn0014343.1.mrna1;Target=FBgn0014343.1 43 696 +
Chr1	stalkie_big_nohaplotig	exon	38387700	38387741	100	-	.	Parent=FBgn0014343.1.mrna1;Target=FBgn0014343.1 1 42 +
Chr1	stalkie_big_nohaplotig	CDS	38348349	38349316	.	-	2	Parent=FBgn0014343.1.mrna1;Target=FBgn0014343.1 1097 2064 +
Chr1	stalkie_big_nohaplotig	CDS	38350231	38350529	.	-	1	Parent=FBgn0014343.1.mrna1;Target=FBgn0014343.1 798 1096 +
Chr1	stalkie_big_nohaplotig	CDS	38357120	38357220	.	-	0	Parent=FBgn0014343.1.mrna1;Target=FBgn0014343.1 697 797 +
Chr1	stalkie_big_nohaplotig	CDS	38375553	38376206	.	-	0	Parent=FBgn0014343.1.mrna1;Target=FBgn0014343.1 43 696 +
Chr1	stalkie_big_nohaplotig	CDS	38387700	38387741	.	-	0	Parent=FBgn0014343.1.mrna1;Target=FBgn0014343.1 1 42 +
Chr1	gffcl	locus	38395449	38396258	.	+	.	ID=RLOC_00007260;geneIDs=FBgn0030722.1.path1;transcripts=FBgn0030722.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38395449	38396258	.	+	.	ID=FBgn0030722.1.mrna1;geneID=FBgn0030722.1.path1;Name=FBgn0030722.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=807;mismatches=1;indels=4;unknowns=0;Target=FBgn0030722.1 810 1 .;locus=RLOC_00007260
Chr1	stalkie_big_nohaplotig	exon	38395449	38396258	99	+	.	Parent=FBgn0030722.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	38395449	38396258	.	+	0	Parent=FBgn0030722.1.mrna1
Chr1	gffcl	locus	38481691	38604925	.	-	.	ID=RLOC_00007261;geneIDs=FBgn0015904.2.path1;transcripts=FBgn0015904.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38481691	38604925	.	-	.	ID=FBgn0015904.2.mrna1;geneID=FBgn0015904.2.path1;Name=FBgn0015904.2;Dir=sensecoverage=97.2;identity=98.3;matches=1480;mismatches=13;indels=12;unknowns=0;locus=RLOC_00007261
Chr1	stalkie_big_nohaplotig	exon	38481691	38482187	99	-	.	Parent=FBgn0015904.2.mrna1;Target=FBgn0015904.2 1139 1635 +
Chr1	stalkie_big_nohaplotig	exon	38491127	38491596	99	-	.	Parent=FBgn0015904.2.mrna1;Target=FBgn0015904.2 669 1138 +
Chr1	stalkie_big_nohaplotig	exon	38539732	38539735	100	-	.	Parent=FBgn0015904.2.mrna1;Target=FBgn0015904.2 665 668 +
Chr1	stalkie_big_nohaplotig	exon	38559363	38559371	38	-	.	Parent=FBgn0015904.2.mrna1;Target=FBgn0015904.2 644 664 +
Chr1	stalkie_big_nohaplotig	exon	38597124	38597132	100	-	.	Parent=FBgn0015904.2.mrna1;Target=FBgn0015904.2 633 641 +
Chr1	stalkie_big_nohaplotig	exon	38604423	38604925	98	-	.	Parent=FBgn0015904.2.mrna1;Target=FBgn0015904.2 47 549 +
Chr1	stalkie_big_nohaplotig	CDS	38481691	38482187	.	-	0	Parent=FBgn0015904.2.mrna1;Target=FBgn0015904.2 1139 1635 +
Chr1	stalkie_big_nohaplotig	CDS	38491127	38491596	.	-	2	Parent=FBgn0015904.2.mrna1;Target=FBgn0015904.2 669 1138 +
Chr1	stalkie_big_nohaplotig	CDS	38539732	38539735	.	-	0	Parent=FBgn0015904.2.mrna1;Target=FBgn0015904.2 665 668 +
Chr1	stalkie_big_nohaplotig	CDS	38559363	38559371	.	-	0	Parent=FBgn0015904.2.mrna1;Target=FBgn0015904.2 644 664 +
Chr1	stalkie_big_nohaplotig	CDS	38597124	38597132	.	-	0	Parent=FBgn0015904.2.mrna1;Target=FBgn0015904.2 633 641 +
Chr1	stalkie_big_nohaplotig	CDS	38604423	38604923	.	-	0	Parent=FBgn0015904.2.mrna1;Target=FBgn0015904.2 49 549 +
Chr1	gffcl	locus	38518262	38518891	.	-	.	ID=RLOC_00007262;geneIDs=comp116012_c0_seq1.path1;transcripts=comp116012_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38518262	38518891	.	-	.	ID=comp116012_c0_seq1.mrna1;geneID=comp116012_c0_seq1.path1;Name=comp116012_c0_seq1;Dir=indeterminatecoverage=95.9;identity=94.1;matches=602;mismatches=15;indels=23;unknowns=0;Target=comp116012_c0_seq1 653 27 .;CDS_Target=comp116012_c0_seq1 269 165 .;locus=RLOC_00007262
Chr1	stalkie_big_nohaplotig	exon	38518262	38518891	94	-	.	Parent=comp116012_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	38518657	38518761	.	-	0	Parent=comp116012_c0_seq1.mrna1
Chr1	gffcl	locus	38524402	38524864	.	+	.	ID=RLOC_00007263;geneIDs=comp150316_c0_seq1.path1;transcripts=comp150316_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38524402	38524864	.	+	.	ID=comp150316_c0_seq1.mrna1;geneID=comp150316_c0_seq1.path1;Name=comp150316_c0_seq1;Dir=indeterminatecoverage=96.7;identity=98.3;matches=455;mismatches=8;indels=0;unknowns=0;Target=comp150316_c0_seq1 478 16 .;CDS_Target=comp150316_c0_seq1 315 118 .;locus=RLOC_00007263
Chr1	stalkie_big_nohaplotig	exon	38524402	38524864	98	+	.	Parent=comp150316_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	38524504	38524701	.	+	0	Parent=comp150316_c0_seq1.mrna1
Chr1	gffcl	locus	38529704	38530390	.	-	.	ID=RLOC_00007264;geneIDs=comp152786_c0_seq1.path1;transcripts=comp152786_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38529704	38530390	.	-	.	ID=comp152786_c0_seq1.mrna1;geneID=comp152786_c0_seq1.path1;Name=comp152786_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=687;mismatches=0;indels=0;unknowns=0;Target=comp152786_c0_seq1 687 1 .;CDS_Target=comp152786_c0_seq1 292 182 .;locus=RLOC_00007264
Chr1	stalkie_big_nohaplotig	exon	38529704	38530390	100	-	.	Parent=comp152786_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	38530099	38530209	.	-	0	Parent=comp152786_c0_seq1.mrna1
Chr1	gffcl	locus	38530408	38534576	.	+	.	ID=RLOC_00007265;geneIDs=comp146217_c0_seq1.path1;transcripts=comp146217_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38530408	38534576	.	+	.	ID=comp146217_c0_seq1.mrna1;geneID=comp146217_c0_seq1.path1;Name=comp146217_c0_seq1;Dir=antisensecoverage=97.5;identity=97.7;matches=737;mismatches=17;indels=0;unknowns=0;Target=comp146217_c0_seq1 275 445 .;locus=RLOC_00007265
Chr1	stalkie_big_nohaplotig	exon	38530408	38530592	100	+	.	Parent=comp146217_c0_seq1.mrna1;Target=comp146217_c0_seq1 589 773 -
Chr1	stalkie_big_nohaplotig	exon	38531041	38531151	100	+	.	Parent=comp146217_c0_seq1.mrna1;Target=comp146217_c0_seq1 478 588 -
Chr1	stalkie_big_nohaplotig	exon	38534119	38534576	96	+	.	Parent=comp146217_c0_seq1.mrna1;Target=comp146217_c0_seq1 20 477 -
Chr1	stalkie_big_nohaplotig	CDS	38534151	38534321	.	+	0	Parent=comp146217_c0_seq1.mrna1
Chr1	gffcl	locus	38726504	38727667	.	+	.	ID=RLOC_00007269;geneIDs=comp149454_c0_seq1.path1;transcripts=comp149454_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38726504	38727667	.	+	.	ID=comp149454_c0_seq1.mrna1;geneID=comp149454_c0_seq1.path1;Name=comp149454_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.2;matches=1146;mismatches=14;indels=7;unknowns=0;Target=comp149454_c0_seq1 1165 3 .;CDS_Target=comp149454_c0_seq1 296 3 .;locus=RLOC_00007269
Chr1	stalkie_big_nohaplotig	exon	38726504	38727667	98	+	.	Parent=comp149454_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	38726504	38726797	.	+	0	Parent=comp149454_c0_seq1.mrna1
Chr1	gffcl	locus	38727800	38728630	.	+	.	ID=RLOC_00007270;geneIDs=comp143269_c0_seq1.path1;transcripts=comp143269_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38727800	38728630	.	+	.	ID=comp143269_c0_seq1.mrna1;geneID=comp143269_c0_seq1.path1;Name=comp143269_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=826;mismatches=5;indels=0;unknowns=0;Target=comp143269_c0_seq1 831 1 .;CDS_Target=comp143269_c0_seq1 76 2 .;locus=RLOC_00007270
Chr1	stalkie_big_nohaplotig	exon	38727800	38728630	99	+	.	Parent=comp143269_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	38727801	38727875	.	+	0	Parent=comp143269_c0_seq1.mrna1
Chr1	gffcl	locus	38761110	38761461	.	+	.	ID=RLOC_00007271;geneIDs=comp136612_c0_seq1.path1;transcripts=comp136612_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38761110	38761461	.	+	.	ID=comp136612_c0_seq1.mrna1;geneID=comp136612_c0_seq1.path1;Name=comp136612_c0_seq1;Dir=indeterminatecoverage=95.6;identity=97.7;matches=344;mismatches=7;indels=1;unknowns=0;Target=comp136612_c0_seq1 366 16 .;CDS_Target=comp136612_c0_seq1 111 16 .;locus=RLOC_00007271
Chr1	stalkie_big_nohaplotig	exon	38761110	38761461	97	+	.	Parent=comp136612_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	38761110	38761206	.	+	0	Parent=comp136612_c0_seq1.mrna1
Chr1	gffcl	locus	38782769	38948436	.	+	.	ID=RLOC_00007272;geneIDs=FBgn0036302.1.path1;transcripts=FBgn0036302.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38782769	38948436	.	+	.	ID=FBgn0036302.1.mrna1;geneID=FBgn0036302.1.path1;Name=FBgn0036302.1;Dir=sensecoverage=100.0;identity=100.0;matches=2070;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007272
Chr1	stalkie_big_nohaplotig	exon	38782769	38782937	100	+	.	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1 169 +
Chr1	stalkie_big_nohaplotig	exon	38783138	38783862	100	+	.	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 170 894 +
Chr1	stalkie_big_nohaplotig	exon	38804606	38804740	100	+	.	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 895 1029 +
Chr1	stalkie_big_nohaplotig	exon	38810977	38810978	100	+	.	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1030 1031 +
Chr1	stalkie_big_nohaplotig	exon	38874732	38874738	100	+	.	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1032 1038 +
Chr1	stalkie_big_nohaplotig	exon	38878431	38878433	100	+	.	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1039 1041 +
Chr1	stalkie_big_nohaplotig	exon	38886018	38886025	100	+	.	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1042 1049 +
Chr1	stalkie_big_nohaplotig	exon	38886369	38886371	100	+	.	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1050 1052 +
Chr1	stalkie_big_nohaplotig	exon	38937241	38937330	100	+	.	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1054 1143 +
Chr1	stalkie_big_nohaplotig	exon	38937434	38937439	100	+	.	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1144 1149 +
Chr1	stalkie_big_nohaplotig	exon	38939830	38939902	100	+	.	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1150 1222 +
Chr1	stalkie_big_nohaplotig	exon	38942336	38942425	100	+	.	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1223 1312 +
Chr1	stalkie_big_nohaplotig	exon	38947613	38947639	100	+	.	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1313 1339 +
Chr1	stalkie_big_nohaplotig	exon	38947706	38948436	100	+	.	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1340 2070 +
Chr1	stalkie_big_nohaplotig	CDS	38782769	38782937	.	+	0	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1 169 +
Chr1	stalkie_big_nohaplotig	CDS	38783138	38783862	.	+	2	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 170 894 +
Chr1	stalkie_big_nohaplotig	CDS	38804606	38804740	.	+	0	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 895 1029 +
Chr1	stalkie_big_nohaplotig	CDS	38810977	38810978	.	+	0	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1030 1031 +
Chr1	stalkie_big_nohaplotig	CDS	38874732	38874738	.	+	1	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1032 1038 +
Chr1	stalkie_big_nohaplotig	CDS	38878431	38878433	.	+	0	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1039 1041 +
Chr1	stalkie_big_nohaplotig	CDS	38886018	38886025	.	+	0	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1042 1049 +
Chr1	stalkie_big_nohaplotig	CDS	38886369	38886371	.	+	1	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1050 1052 +
Chr1	stalkie_big_nohaplotig	CDS	38937241	38937330	.	+	1	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1054 1143 +
Chr1	stalkie_big_nohaplotig	CDS	38937434	38937439	.	+	1	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1144 1149 +
Chr1	stalkie_big_nohaplotig	CDS	38939830	38939902	.	+	1	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1150 1222 +
Chr1	stalkie_big_nohaplotig	CDS	38942336	38942425	.	+	0	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1223 1312 +
Chr1	stalkie_big_nohaplotig	CDS	38947613	38947639	.	+	0	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1313 1339 +
Chr1	stalkie_big_nohaplotig	CDS	38947706	38948436	.	+	0	Parent=FBgn0036302.1.mrna1;Target=FBgn0036302.1 1340 2070 +
Chr1	gffcl	locus	38879027	38885759	.	-	.	ID=RLOC_00007273;geneIDs=FBgn0263603.1.path1;transcripts=FBgn0263603.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38879027	38885759	.	-	.	ID=FBgn0263603.1.mrna1;geneID=FBgn0263603.1.path1;Name=FBgn0263603.1;Dir=sensecoverage=100.0;identity=99.4;matches=2691;mismatches=15;indels=0;unknowns=0;locus=RLOC_00007273
Chr1	stalkie_big_nohaplotig	exon	38879027	38879572	99	-	.	Parent=FBgn0263603.1.mrna1;Target=FBgn0263603.1 2161 2706 +
Chr1	stalkie_big_nohaplotig	exon	38881607	38881809	99	-	.	Parent=FBgn0263603.1.mrna1;Target=FBgn0263603.1 1958 2160 +
Chr1	stalkie_big_nohaplotig	exon	38883382	38883885	99	-	.	Parent=FBgn0263603.1.mrna1;Target=FBgn0263603.1 1454 1957 +
Chr1	stalkie_big_nohaplotig	exon	38884174	38884599	98	-	.	Parent=FBgn0263603.1.mrna1;Target=FBgn0263603.1 1028 1453 +
Chr1	stalkie_big_nohaplotig	exon	38884658	38885624	99	-	.	Parent=FBgn0263603.1.mrna1;Target=FBgn0263603.1 61 1027 +
Chr1	stalkie_big_nohaplotig	exon	38885700	38885759	100	-	.	Parent=FBgn0263603.1.mrna1;Target=FBgn0263603.1 1 60 +
Chr1	stalkie_big_nohaplotig	CDS	38879027	38879572	.	-	0	Parent=FBgn0263603.1.mrna1;Target=FBgn0263603.1 2161 2706 +
Chr1	stalkie_big_nohaplotig	CDS	38881607	38881809	.	-	2	Parent=FBgn0263603.1.mrna1;Target=FBgn0263603.1 1958 2160 +
Chr1	stalkie_big_nohaplotig	CDS	38883382	38883885	.	-	2	Parent=FBgn0263603.1.mrna1;Target=FBgn0263603.1 1454 1957 +
Chr1	stalkie_big_nohaplotig	CDS	38884174	38884599	.	-	2	Parent=FBgn0263603.1.mrna1;Target=FBgn0263603.1 1028 1453 +
Chr1	stalkie_big_nohaplotig	CDS	38884658	38885624	.	-	0	Parent=FBgn0263603.1.mrna1;Target=FBgn0263603.1 61 1027 +
Chr1	stalkie_big_nohaplotig	CDS	38885700	38885759	.	-	0	Parent=FBgn0263603.1.mrna1;Target=FBgn0263603.1 1 60 +
Chr1	stalkie_big_nohaplotig	mRNA	38956809	38957573	.	-	.	ID=FBgn0036300.1.mrna1;geneID=FBgn0036300.1.path1;Name=FBgn0036300.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=765;mismatches=0;indels=0;unknowns=0;Target=FBgn0036300.1 765 1 .;locus=RLOC_00007274
Chr1	stalkie_big_nohaplotig	exon	38956809	38957573	100	-	.	Parent=FBgn0036300.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	38956809	38957573	.	-	0	Parent=FBgn0036300.1.mrna1
Chr1	gffcl	locus	38954897	38956622	.	+	.	ID=RLOC_00007275;geneIDs=FBgn0036301.1.path1;transcripts=FBgn0036301.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38954897	38956622	.	+	.	ID=FBgn0036301.1.mrna1;geneID=FBgn0036301.1.path1;Name=FBgn0036301.1;Dir=sensecoverage=100.0;identity=99.9;matches=1553;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007275
Chr1	stalkie_big_nohaplotig	exon	38954897	38955052	100	+	.	Parent=FBgn0036301.1.mrna1;Target=FBgn0036301.1 1 156 +
Chr1	stalkie_big_nohaplotig	exon	38955110	38955415	100	+	.	Parent=FBgn0036301.1.mrna1;Target=FBgn0036301.1 157 462 +
Chr1	stalkie_big_nohaplotig	exon	38955473	38955890	100	+	.	Parent=FBgn0036301.1.mrna1;Target=FBgn0036301.1 463 880 +
Chr1	stalkie_big_nohaplotig	exon	38955949	38956622	99	+	.	Parent=FBgn0036301.1.mrna1;Target=FBgn0036301.1 881 1554 +
Chr1	stalkie_big_nohaplotig	CDS	38954897	38955052	.	+	0	Parent=FBgn0036301.1.mrna1;Target=FBgn0036301.1 1 156 +
Chr1	stalkie_big_nohaplotig	CDS	38955110	38955415	.	+	0	Parent=FBgn0036301.1.mrna1;Target=FBgn0036301.1 157 462 +
Chr1	stalkie_big_nohaplotig	CDS	38955473	38955890	.	+	0	Parent=FBgn0036301.1.mrna1;Target=FBgn0036301.1 463 880 +
Chr1	stalkie_big_nohaplotig	CDS	38955949	38956622	.	+	2	Parent=FBgn0036301.1.mrna1;Target=FBgn0036301.1 881 1554 +
Chr1	gffcl	locus	38962144	38968268	.	+	.	ID=RLOC_00007276;geneIDs=FBgn0036298.1.path1;transcripts=FBgn0036298.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38962144	38968268	.	+	.	ID=FBgn0036298.1.mrna1;geneID=FBgn0036298.1.path1;Name=FBgn0036298.1;Dir=sensecoverage=100.0;identity=99.1;matches=1641;mismatches=14;indels=1;unknowns=0;Target=FBgn0036298.1 3 80 +;locus=RLOC_00007276
Chr1	stalkie_big_nohaplotig	exon	38962144	38962255	99	+	.	Parent=FBgn0036298.1.mrna1;Target=FBgn0036298.1 1 113 +
Chr1	stalkie_big_nohaplotig	exon	38966670	38968107	99	+	.	Parent=FBgn0036298.1.mrna1;Target=FBgn0036298.1 114 1551 +
Chr1	stalkie_big_nohaplotig	exon	38968164	38968268	99	+	.	Parent=FBgn0036298.1.mrna1;Target=FBgn0036298.1 1552 1656 +
Chr1	stalkie_big_nohaplotig	CDS	38962146	38962222	.	+	0	Parent=FBgn0036298.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39131525	39218237	.	+	.	ID=comp147932_c3_seq1.mrna1;geneID=comp147932_c3_seq1.path1;Name=comp147932_c3_seq1;Dir=sensecoverage=100.0;identity=96.1;matches=908;mismatches=5;indels=32;unknowns=0;Target=comp147932_c3_seq1 384 518 +;locus=RLOC_00007277
Chr1	stalkie_big_nohaplotig	exon	39131525	39131546	100	+	.	Parent=comp147932_c3_seq1.mrna1;Target=comp147932_c3_seq1 1 22 +
Chr1	stalkie_big_nohaplotig	exon	39137982	39138264	90	+	.	Parent=comp147932_c3_seq1.mrna1;Target=comp147932_c3_seq1 23 331 +
Chr1	stalkie_big_nohaplotig	exon	39217624	39218237	98	+	.	Parent=comp147932_c3_seq1.mrna1;Target=comp147932_c3_seq1 332 939 +
Chr1	stalkie_big_nohaplotig	CDS	39217676	39217810	.	+	0	Parent=comp147932_c3_seq1.mrna1
Chr1	gffcl	locus	38974958	38975809	.	-	.	ID=RLOC_00007278;geneIDs=FBgn0035169.1.path1;transcripts=FBgn0035169.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38974958	38975809	.	-	.	ID=FBgn0035169.1.mrna1;geneID=FBgn0035169.1.path1;Name=FBgn0035169.1;Dir=sensecoverage=100.0;identity=98.2;matches=784;mismatches=14;indels=0;unknowns=0;locus=RLOC_00007278
Chr1	stalkie_big_nohaplotig	exon	38974958	38975350	96	-	.	Parent=FBgn0035169.1.mrna1;Target=FBgn0035169.1 406 798 +
Chr1	stalkie_big_nohaplotig	exon	38975405	38975809	99	-	.	Parent=FBgn0035169.1.mrna1;Target=FBgn0035169.1 1 405 +
Chr1	stalkie_big_nohaplotig	CDS	38974958	38975350	.	-	0	Parent=FBgn0035169.1.mrna1;Target=FBgn0035169.1 406 798 +
Chr1	stalkie_big_nohaplotig	CDS	38975405	38975809	.	-	0	Parent=FBgn0035169.1.mrna1;Target=FBgn0035169.1 1 405 +
Chr1	gffcl	locus	38978823	38979346	.	+	.	ID=RLOC_00007279;geneIDs=FBgn0040793.1.path1;transcripts=FBgn0040793.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38978823	38979346	.	+	.	ID=FBgn0040793.1.mrna1;geneID=FBgn0040793.1.path1;Name=FBgn0040793.1;Dir=sensecoverage=100.0;identity=99.3;matches=289;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007279
Chr1	stalkie_big_nohaplotig	exon	38978823	38978889	100	+	.	Parent=FBgn0040793.1.mrna1;Target=FBgn0040793.1 1 67 +
Chr1	stalkie_big_nohaplotig	exon	38979030	38979199	99	+	.	Parent=FBgn0040793.1.mrna1;Target=FBgn0040793.1 68 237 +
Chr1	stalkie_big_nohaplotig	exon	38979293	38979346	98	+	.	Parent=FBgn0040793.1.mrna1;Target=FBgn0040793.1 238 291 +
Chr1	stalkie_big_nohaplotig	CDS	38978823	38978889	.	+	0	Parent=FBgn0040793.1.mrna1;Target=FBgn0040793.1 1 67 +
Chr1	stalkie_big_nohaplotig	CDS	38979030	38979199	.	+	2	Parent=FBgn0040793.1.mrna1;Target=FBgn0040793.1 68 237 +
Chr1	stalkie_big_nohaplotig	CDS	38979293	38979346	.	+	0	Parent=FBgn0040793.1.mrna1;Target=FBgn0040793.1 238 291 +
Chr1	gffcl	locus	38980046	38980785	.	-	.	ID=RLOC_00007280;geneIDs=comp151614_c1_seq1.path1;transcripts=comp151614_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38980046	38980785	.	-	.	ID=comp151614_c1_seq1.mrna1;geneID=comp151614_c1_seq1.path1;Name=comp151614_c1_seq1;Dir=indeterminatecoverage=92.9;identity=91.5;matches=541;mismatches=24;indels=26;unknowns=0;Target=comp151614_c1_seq1 236 153 .;locus=RLOC_00007280
Chr1	stalkie_big_nohaplotig	exon	38980046	38980108	90	-	.	Parent=comp151614_c1_seq1.mrna1;Target=comp151614_c1_seq1 663 601 .
Chr1	stalkie_big_nohaplotig	exon	38980280	38980785	91	-	.	Parent=comp151614_c1_seq1.mrna1;Target=comp151614_c1_seq1 571 48 .
Chr1	stalkie_big_nohaplotig	CDS	38980615	38980698	.	-	0	Parent=comp151614_c1_seq1.mrna1
Chr1	gffcl	locus	38980919	38981735	.	-	.	ID=RLOC_00007281;geneIDs=FBgn0053051.1.path1;transcripts=FBgn0053051.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38980919	38981735	.	-	.	ID=FBgn0053051.1.mrna1;geneID=FBgn0053051.1.path1;Name=FBgn0053051.1;Dir=sensecoverage=99.8;identity=98.8;matches=642;mismatches=8;indels=0;unknowns=0;locus=RLOC_00007281
Chr1	stalkie_big_nohaplotig	exon	38980919	38981032	100	-	.	Parent=FBgn0053051.1.mrna1;Target=FBgn0053051.1 538 651 +
Chr1	stalkie_big_nohaplotig	exon	38981087	38981329	98	-	.	Parent=FBgn0053051.1.mrna1;Target=FBgn0053051.1 295 537 +
Chr1	stalkie_big_nohaplotig	exon	38981386	38981517	100	-	.	Parent=FBgn0053051.1.mrna1;Target=FBgn0053051.1 163 294 +
Chr1	stalkie_big_nohaplotig	exon	38981575	38981735	97	-	.	Parent=FBgn0053051.1.mrna1;Target=FBgn0053051.1 2 162 +
Chr1	stalkie_big_nohaplotig	CDS	38980919	38981032	.	-	0	Parent=FBgn0053051.1.mrna1;Target=FBgn0053051.1 538 651 +
Chr1	stalkie_big_nohaplotig	CDS	38981087	38981329	.	-	0	Parent=FBgn0053051.1.mrna1;Target=FBgn0053051.1 295 537 +
Chr1	stalkie_big_nohaplotig	CDS	38981386	38981517	.	-	0	Parent=FBgn0053051.1.mrna1;Target=FBgn0053051.1 163 294 +
Chr1	stalkie_big_nohaplotig	CDS	38981575	38981733	.	-	0	Parent=FBgn0053051.1.mrna1;Target=FBgn0053051.1 4 162 +
Chr1	gffcl	locus	38983332	38984424	.	-	.	ID=RLOC_00007282;geneIDs=FBgn0053052.1.path1;transcripts=FBgn0053052.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	38983332	38984424	.	-	.	ID=FBgn0053052.1.mrna1;geneID=FBgn0053052.1.path1;Name=FBgn0053052.1;Dir=sensecoverage=100.0;identity=99.3;matches=894;mismatches=5;indels=1;unknowns=0;Target=FBgn0053052.1 3 29 +;locus=RLOC_00007282
Chr1	stalkie_big_nohaplotig	exon	38983332	38983548	100	-	.	Parent=FBgn0053052.1.mrna1;Target=FBgn0053052.1 684 900 +
Chr1	stalkie_big_nohaplotig	exon	38983614	38983754	100	-	.	Parent=FBgn0053052.1.mrna1;Target=FBgn0053052.1 543 683 +
Chr1	stalkie_big_nohaplotig	exon	38983822	38984323	99	-	.	Parent=FBgn0053052.1.mrna1;Target=FBgn0053052.1 41 542 +
Chr1	stalkie_big_nohaplotig	exon	38984386	38984424	97	-	.	Parent=FBgn0053052.1.mrna1;Target=FBgn0053052.1 1 40 +
Chr1	stalkie_big_nohaplotig	CDS	38984397	38984422	.	-	0	Parent=FBgn0053052.1.mrna1
Chr1	gffcl	locus	39010230	39011279	.	-	.	ID=RLOC_00007283;geneIDs=FBgn0042641.1.path1;transcripts=FBgn0042641.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39010230	39011279	.	-	.	ID=FBgn0042641.1.mrna1;geneID=FBgn0042641.1.path1;Name=FBgn0042641.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1050;mismatches=0;indels=0;unknowns=0;Target=FBgn0042641.1 1050 1 .;locus=RLOC_00007283
Chr1	stalkie_big_nohaplotig	exon	39010230	39011279	100	-	.	Parent=FBgn0042641.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39010230	39011279	.	-	0	Parent=FBgn0042641.1.mrna1
Chr1	gffcl	locus	39013277	39017760	.	+	.	ID=RLOC_00007284;geneIDs=FBgn0052176.1.path1;transcripts=FBgn0052176.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39013277	39017760	.	+	.	ID=FBgn0052176.1.mrna1;geneID=FBgn0052176.1.path1;Name=FBgn0052176.1;Dir=sensecoverage=100.0;identity=100.0;matches=1902;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007284
Chr1	stalkie_big_nohaplotig	exon	39013277	39013486	100	+	.	Parent=FBgn0052176.1.mrna1;Target=FBgn0052176.1 1 210 +
Chr1	stalkie_big_nohaplotig	exon	39013549	39013693	100	+	.	Parent=FBgn0052176.1.mrna1;Target=FBgn0052176.1 211 355 +
Chr1	stalkie_big_nohaplotig	exon	39013756	39013815	100	+	.	Parent=FBgn0052176.1.mrna1;Target=FBgn0052176.1 356 415 +
Chr1	stalkie_big_nohaplotig	exon	39015863	39015925	100	+	.	Parent=FBgn0052176.1.mrna1;Target=FBgn0052176.1 416 478 +
Chr1	stalkie_big_nohaplotig	exon	39016273	39017468	100	+	.	Parent=FBgn0052176.1.mrna1;Target=FBgn0052176.1 479 1674 +
Chr1	stalkie_big_nohaplotig	exon	39017533	39017760	100	+	.	Parent=FBgn0052176.1.mrna1;Target=FBgn0052176.1 1675 1902 +
Chr1	stalkie_big_nohaplotig	CDS	39013277	39013486	.	+	0	Parent=FBgn0052176.1.mrna1;Target=FBgn0052176.1 1 210 +
Chr1	stalkie_big_nohaplotig	CDS	39013549	39013693	.	+	0	Parent=FBgn0052176.1.mrna1;Target=FBgn0052176.1 211 355 +
Chr1	stalkie_big_nohaplotig	CDS	39013756	39013815	.	+	2	Parent=FBgn0052176.1.mrna1;Target=FBgn0052176.1 356 415 +
Chr1	stalkie_big_nohaplotig	CDS	39015863	39015925	.	+	2	Parent=FBgn0052176.1.mrna1;Target=FBgn0052176.1 416 478 +
Chr1	stalkie_big_nohaplotig	CDS	39016273	39017468	.	+	2	Parent=FBgn0052176.1.mrna1;Target=FBgn0052176.1 479 1674 +
Chr1	stalkie_big_nohaplotig	CDS	39017533	39017760	.	+	0	Parent=FBgn0052176.1.mrna1;Target=FBgn0052176.1 1675 1902 +
Chr1	gffcl	locus	39014135	39015805	.	-	.	ID=RLOC_00007285;geneIDs=FBgn0036723.1.path1;transcripts=FBgn0036723.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39014135	39015805	.	-	.	ID=FBgn0036723.1.mrna1;geneID=FBgn0036723.1.path1;Name=FBgn0036723.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1671;mismatches=0;indels=0;unknowns=0;Target=FBgn0036723.1 1671 1 .;locus=RLOC_00007285
Chr1	stalkie_big_nohaplotig	exon	39014135	39015805	100	-	.	Parent=FBgn0036723.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39014135	39015805	.	-	0	Parent=FBgn0036723.1.mrna1
Chr1	gffcl	locus	39021419	39022631	.	-	.	ID=RLOC_00007286;geneIDs=comp153709_c0_seq1.path1;transcripts=comp153709_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39021419	39022631	.	-	.	ID=comp153709_c0_seq1.mrna1;geneID=comp153709_c0_seq1.path1;Name=comp153709_c0_seq1;Dir=antisensecoverage=93.9;identity=98.1;matches=1036;mismatches=8;indels=12;unknowns=0;Target=comp153709_c0_seq1 778 1002 .;locus=RLOC_00007286
Chr1	stalkie_big_nohaplotig	exon	39021419	39021755	97	-	.	Parent=comp153709_c0_seq1.mrna1;Target=comp153709_c0_seq1 55 388 -
Chr1	stalkie_big_nohaplotig	exon	39021812	39022159	100	-	.	Parent=comp153709_c0_seq1.mrna1;Target=comp153709_c0_seq1 389 736 -
Chr1	stalkie_big_nohaplotig	exon	39022270	39022631	96	-	.	Parent=comp153709_c0_seq1.mrna1;Target=comp153709_c0_seq1 737 1107 -
Chr1	stalkie_big_nohaplotig	CDS	39022311	39022526	.	-	0	Parent=comp153709_c0_seq1.mrna1
Chr1	gffcl	locus	39065476	39066081	.	-	.	ID=RLOC_00007287;geneIDs=comp66572_c0_seq1.path1;transcripts=comp66572_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39065476	39066081	.	-	.	ID=comp66572_c0_seq1.mrna1;geneID=comp66572_c0_seq1.path1;Name=comp66572_c0_seq1;Dir=indeterminatecoverage=96.0;identity=99.8;matches=605;mismatches=1;indels=0;unknowns=0;Target=comp66572_c0_seq1 631 26 .;CDS_Target=comp66572_c0_seq1 376 197 .;locus=RLOC_00007287
Chr1	stalkie_big_nohaplotig	exon	39065476	39066081	99	-	.	Parent=comp66572_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39065731	39065910	.	-	0	Parent=comp66572_c0_seq1.mrna1
Chr1	gffcl	locus	39066428	39067063	.	+	.	ID=RLOC_00007288;geneIDs=comp140703_c0_seq1.path1;transcripts=comp140703_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39066428	39067063	.	+	.	ID=comp140703_c0_seq1.mrna1;geneID=comp140703_c0_seq1.path1;Name=comp140703_c0_seq1;Dir=indeterminatecoverage=97.7;identity=99.4;matches=632;mismatches=3;indels=1;unknowns=0;Target=comp140703_c0_seq1 635 1 .;CDS_Target=comp140703_c0_seq1 101 3 .;locus=RLOC_00007288
Chr1	stalkie_big_nohaplotig	exon	39066428	39067063	99	+	.	Parent=comp140703_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39066430	39066529	.	+	0	Parent=comp140703_c0_seq1.mrna1
Chr1	gffcl	locus	39067239	39067787	.	.	.	ID=RLOC_00007289;geneIDs=comp73355_c0_seq1.path1,comp145392_c0_seq1.path1;transcripts=comp145392_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39067239	39067589	.	-	.	ID=comp145392_c0_seq1.mrna1;geneID=comp145392_c0_seq1.path1;Name=comp145392_c0_seq1;Dir=indeterminatecoverage=97.5;identity=99.4;matches=349;mismatches=2;indels=0;unknowns=0;Target=comp145392_c0_seq1 351 1 .;CDS_Target=comp145392_c0_seq1 37 2 .;locus=RLOC_00007289
Chr1	stalkie_big_nohaplotig	exon	39067239	39067589	99	-	.	Parent=comp145392_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39067553	39067588	.	-	0	Parent=comp145392_c0_seq1.mrna1
Chr1	gffcl	locus	39123000	39123185	.	-	.	ID=RLOC_00007290;geneIDs=FBgn0003138.1.path1;transcripts=FBgn0003138.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39123000	39123185	.	-	.	ID=FBgn0003138.1.mrna1;geneID=FBgn0003138.1.path1;Name=FBgn0003138.1;Dir=indeterminatecoverage=10.6;identity=100.0;matches=186;mismatches=0;indels=0;unknowns=0;Target=FBgn0003138.1 186 1 .;locus=RLOC_00007290
Chr1	stalkie_big_nohaplotig	exon	39123000	39123185	100	-	.	Parent=FBgn0003138.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39123000	39123185	.	-	0	Parent=FBgn0003138.1.mrna1
Chr1	gffcl	locus	39126148	39130356	.	+	.	ID=RLOC_00007291;geneIDs=FBgn0029514.1.path1;transcripts=FBgn0029514.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39126148	39130356	.	+	.	ID=FBgn0029514.1.mrna1;geneID=FBgn0029514.1.path1;Name=FBgn0029514.1;Dir=sensecoverage=100.0;identity=100.0;matches=741;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007291
Chr1	stalkie_big_nohaplotig	exon	39126148	39126460	100	+	.	Parent=FBgn0029514.1.mrna1;Target=FBgn0029514.1 1 313 +
Chr1	stalkie_big_nohaplotig	exon	39126514	39126774	100	+	.	Parent=FBgn0029514.1.mrna1;Target=FBgn0029514.1 314 574 +
Chr1	stalkie_big_nohaplotig	exon	39130190	39130356	100	+	.	Parent=FBgn0029514.1.mrna1;Target=FBgn0029514.1 575 741 +
Chr1	stalkie_big_nohaplotig	CDS	39126148	39126460	.	+	0	Parent=FBgn0029514.1.mrna1;Target=FBgn0029514.1 1 313 +
Chr1	stalkie_big_nohaplotig	CDS	39126514	39126774	.	+	2	Parent=FBgn0029514.1.mrna1;Target=FBgn0029514.1 314 574 +
Chr1	stalkie_big_nohaplotig	CDS	39130190	39130356	.	+	2	Parent=FBgn0029514.1.mrna1;Target=FBgn0029514.1 575 741 +
Chr1	gffcl	locus	39132816	39134442	.	.	.	ID=RLOC_00007293;geneIDs=comp117211_c0_seq1.path1,comp151485_c0_seq1.path1,comp153139_c0_seq1.path1;transcripts=comp117211_c0_seq1.mrna1,comp151485_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39132816	39133080	.	+	.	ID=comp117211_c0_seq1.mrna1;geneID=comp117211_c0_seq1.path1;Name=comp117211_c0_seq1;Dir=indeterminatecoverage=72.3;identity=93.9;matches=201;mismatches=13;indels=0;unknowns=0;Target=comp117211_c0_seq1 114 1 .;locus=RLOC_00007293
Chr1	stalkie_big_nohaplotig	exon	39132816	39132964	96	+	.	Parent=comp117211_c0_seq1.mrna1;Target=comp117211_c0_seq1 149 1 .
Chr1	stalkie_big_nohaplotig	exon	39133016	39133080	87	+	.	Parent=comp117211_c0_seq1.mrna1;Target=comp117211_c0_seq1 214 150 .
Chr1	stalkie_big_nohaplotig	CDS	39132816	39132929	.	+	0	Parent=comp117211_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39133753	39134442	.	+	.	ID=comp151485_c0_seq1.mrna1;geneID=comp151485_c0_seq1.path1;Name=comp151485_c0_seq1;Dir=indeterminatecoverage=98.9;identity=98.0;matches=681;mismatches=9;indels=5;unknowns=0;Target=comp151485_c0_seq1 703 9 .;CDS_Target=comp151485_c0_seq1 368 288 .;locus=RLOC_00007293
Chr1	stalkie_big_nohaplotig	exon	39133753	39134442	97	+	.	Parent=comp151485_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39134032	39134107	.	+	0	Parent=comp151485_c0_seq1.mrna1
Chr1	gffcl	locus	39134598	39135315	.	+	.	ID=RLOC_00007294;geneIDs=comp98887_c0_seq1.path1;transcripts=comp98887_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39134598	39135315	.	+	.	ID=comp98887_c0_seq1.mrna1;geneID=comp98887_c0_seq1.path1;Name=comp98887_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=716;mismatches=2;indels=0;unknowns=0;Target=comp98887_c0_seq1 718 1 .;CDS_Target=comp98887_c0_seq1 718 560 .;locus=RLOC_00007294
Chr1	stalkie_big_nohaplotig	exon	39134598	39135315	99	+	.	Parent=comp98887_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39135157	39135315	.	+	0	Parent=comp98887_c0_seq1.mrna1
Chr1	gffcl	locus	39163813	39165163	.	-	.	ID=RLOC_00007295;geneIDs=comp152461_c0_seq1.path1;transcripts=comp152461_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39163813	39165163	.	-	.	ID=comp152461_c0_seq1.mrna1;geneID=comp152461_c0_seq1.path1;Name=comp152461_c0_seq1;Dir=sensecoverage=97.2;identity=96.5;matches=1115;mismatches=15;indels=26;unknowns=0;Target=comp152461_c0_seq1 21 446 +;locus=RLOC_00007295
Chr1	stalkie_big_nohaplotig	exon	39163813	39163992	100	-	.	Parent=comp152461_c0_seq1.mrna1;Target=comp152461_c0_seq1 988 1167 +
Chr1	stalkie_big_nohaplotig	exon	39164064	39164107	100	-	.	Parent=comp152461_c0_seq1.mrna1;Target=comp152461_c0_seq1 944 987 +
Chr1	stalkie_big_nohaplotig	exon	39164166	39164453	87	-	.	Parent=comp152461_c0_seq1.mrna1;Target=comp152461_c0_seq1 644 943 +
Chr1	stalkie_big_nohaplotig	exon	39164539	39165163	99	-	.	Parent=comp152461_c0_seq1.mrna1;Target=comp152461_c0_seq1 19 643 +
Chr1	stalkie_big_nohaplotig	CDS	39164736	39165161	.	-	0	Parent=comp152461_c0_seq1.mrna1
Chr1	gffcl	locus	39181281	39182064	.	-	.	ID=RLOC_00007296;geneIDs=comp149466_c0_seq1.path1;transcripts=comp149466_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39181281	39182064	.	-	.	ID=comp149466_c0_seq1.mrna1;geneID=comp149466_c0_seq1.path1;Name=comp149466_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=783;mismatches=1;indels=1;unknowns=0;Target=comp149466_c0_seq1 785 1 .;CDS_Target=comp149466_c0_seq1 644 516 .;locus=RLOC_00007296
Chr1	stalkie_big_nohaplotig	exon	39181281	39182064	99	-	.	Parent=comp149466_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39181422	39181550	.	-	0	Parent=comp149466_c0_seq1.mrna1
Chr1	gffcl	locus	39271454	39272006	.	+	.	ID=RLOC_00007297;geneIDs=FBgn0003206.1.path2;transcripts=FBgn0003206.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	39271454	39272006	.	+	.	ID=FBgn0003206.1.mrna2;geneID=FBgn0003206.1.path2;Name=FBgn0003206.1;Dir=sensecoverage=81.3;identity=98.8;matches=489;mismatches=6;indels=0;unknowns=0;locus=RLOC_00007297
Chr1	stalkie_big_nohaplotig	exon	39271454	39271541	98	+	.	Parent=FBgn0003206.1.mrna2;Target=FBgn0003206.1 115 202 +
Chr1	stalkie_big_nohaplotig	exon	39271600	39272006	98	+	.	Parent=FBgn0003206.1.mrna2;Target=FBgn0003206.1 203 609 +
Chr1	stalkie_big_nohaplotig	CDS	39271454	39271541	.	+	0	Parent=FBgn0003206.1.mrna2;Target=FBgn0003206.1 115 202 +
Chr1	stalkie_big_nohaplotig	CDS	39271600	39272006	.	+	2	Parent=FBgn0003206.1.mrna2;Target=FBgn0003206.1 203 609 +
Chr1	gffcl	locus	39277971	39278423	.	+	.	ID=RLOC_00007298;geneIDs=FBgn0004552.1.path1;transcripts=FBgn0004552.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39277971	39278423	.	+	.	ID=FBgn0004552.1.mrna1;geneID=FBgn0004552.1.path1;Name=FBgn0004552.1;Dir=sensecoverage=96.5;identity=100.0;matches=272;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007298
Chr1	stalkie_big_nohaplotig	exon	39277971	39278053	100	+	.	Parent=FBgn0004552.1.mrna1;Target=FBgn0004552.1 11 93 +
Chr1	stalkie_big_nohaplotig	exon	39278169	39278318	100	+	.	Parent=FBgn0004552.1.mrna1;Target=FBgn0004552.1 94 243 +
Chr1	stalkie_big_nohaplotig	exon	39278385	39278423	100	+	.	Parent=FBgn0004552.1.mrna1;Target=FBgn0004552.1 244 282 +
Chr1	stalkie_big_nohaplotig	CDS	39277973	39278053	.	+	0	Parent=FBgn0004552.1.mrna1;Target=FBgn0004552.1 13 93 +
Chr1	stalkie_big_nohaplotig	CDS	39278169	39278318	.	+	0	Parent=FBgn0004552.1.mrna1;Target=FBgn0004552.1 94 243 +
Chr1	stalkie_big_nohaplotig	CDS	39278385	39278423	.	+	0	Parent=FBgn0004552.1.mrna1;Target=FBgn0004552.1 244 282 +
Chr1	gffcl	locus	39280798	39290601	.	+	.	ID=RLOC_00007299;geneIDs=FBgn0052260.1.path1;transcripts=FBgn0052260.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39280798	39290601	.	+	.	ID=FBgn0052260.1.mrna1;geneID=FBgn0052260.1.path1;Name=FBgn0052260.1;Dir=sensecoverage=100.0;identity=99.4;matches=1408;mismatches=8;indels=0;unknowns=0;locus=RLOC_00007299
Chr1	stalkie_big_nohaplotig	exon	39280798	39280912	96	+	.	Parent=FBgn0052260.1.mrna1;Target=FBgn0052260.1 1 115 +
Chr1	stalkie_big_nohaplotig	exon	39287756	39287925	100	+	.	Parent=FBgn0052260.1.mrna1;Target=FBgn0052260.1 116 285 +
Chr1	stalkie_big_nohaplotig	exon	39287983	39288400	99	+	.	Parent=FBgn0052260.1.mrna1;Target=FBgn0052260.1 286 703 +
Chr1	stalkie_big_nohaplotig	exon	39288495	39288788	99	+	.	Parent=FBgn0052260.1.mrna1;Target=FBgn0052260.1 704 997 +
Chr1	stalkie_big_nohaplotig	exon	39288858	39289069	100	+	.	Parent=FBgn0052260.1.mrna1;Target=FBgn0052260.1 998 1209 +
Chr1	stalkie_big_nohaplotig	exon	39290319	39290390	100	+	.	Parent=FBgn0052260.1.mrna1;Target=FBgn0052260.1 1210 1281 +
Chr1	stalkie_big_nohaplotig	exon	39290467	39290601	100	+	.	Parent=FBgn0052260.1.mrna1;Target=FBgn0052260.1 1282 1416 +
Chr1	stalkie_big_nohaplotig	CDS	39280798	39280912	.	+	0	Parent=FBgn0052260.1.mrna1;Target=FBgn0052260.1 1 115 +
Chr1	stalkie_big_nohaplotig	CDS	39287756	39287925	.	+	2	Parent=FBgn0052260.1.mrna1;Target=FBgn0052260.1 116 285 +
Chr1	stalkie_big_nohaplotig	CDS	39287983	39288400	.	+	0	Parent=FBgn0052260.1.mrna1;Target=FBgn0052260.1 286 703 +
Chr1	stalkie_big_nohaplotig	CDS	39288495	39288788	.	+	2	Parent=FBgn0052260.1.mrna1;Target=FBgn0052260.1 704 997 +
Chr1	stalkie_big_nohaplotig	CDS	39288858	39289069	.	+	2	Parent=FBgn0052260.1.mrna1;Target=FBgn0052260.1 998 1209 +
Chr1	stalkie_big_nohaplotig	CDS	39290319	39290390	.	+	0	Parent=FBgn0052260.1.mrna1;Target=FBgn0052260.1 1210 1281 +
Chr1	stalkie_big_nohaplotig	CDS	39290467	39290601	.	+	0	Parent=FBgn0052260.1.mrna1;Target=FBgn0052260.1 1282 1416 +
Chr1	gffcl	locus	39298424	39298537	.	-	.	ID=RLOC_00007300;geneIDs=FBgn0003206.1.path1;transcripts=FBgn0003206.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39298424	39298537	.	-	.	ID=FBgn0003206.1.mrna1;geneID=FBgn0003206.1.path1;Name=FBgn0003206.1;Dir=indeterminatecoverage=18.7;identity=99.1;matches=113;mismatches=1;indels=0;unknowns=0;Target=FBgn0003206.1 114 1 .;locus=RLOC_00007300
Chr1	stalkie_big_nohaplotig	exon	39298424	39298537	99	-	.	Parent=FBgn0003206.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39298424	39298537	.	-	0	Parent=FBgn0003206.1.mrna1
Chr1	gffcl	locus	39301303	39302354	.	-	.	ID=RLOC_00007301;geneIDs=FBgn0260985.1.path1;transcripts=FBgn0260985.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39301303	39302354	.	-	.	ID=FBgn0260985.1.mrna1;geneID=FBgn0260985.1.path1;Name=FBgn0260985.1;Dir=sensecoverage=100.0;identity=99.5;matches=991;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007301
Chr1	stalkie_big_nohaplotig	exon	39301303	39302130	99	-	.	Parent=FBgn0260985.1.mrna1;Target=FBgn0260985.1 169 996 +
Chr1	stalkie_big_nohaplotig	exon	39302187	39302354	100	-	.	Parent=FBgn0260985.1.mrna1;Target=FBgn0260985.1 1 168 +
Chr1	stalkie_big_nohaplotig	CDS	39301303	39302130	.	-	0	Parent=FBgn0260985.1.mrna1;Target=FBgn0260985.1 169 996 +
Chr1	stalkie_big_nohaplotig	CDS	39302187	39302354	.	-	0	Parent=FBgn0260985.1.mrna1;Target=FBgn0260985.1 1 168 +
Chr1	gffcl	locus	39317348	39320053	.	+	.	ID=RLOC_00007302;geneIDs=FBgn0003138.1.path2;transcripts=FBgn0003138.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	39317348	39320053	.	+	.	ID=FBgn0003138.1.mrna2;geneID=FBgn0003138.1.path2;Name=FBgn0003138.1;Dir=sensecoverage=89.4;identity=99.9;matches=1565;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007302
Chr1	stalkie_big_nohaplotig	exon	39317348	39317521	99	+	.	Parent=FBgn0003138.1.mrna2;Target=FBgn0003138.1 187 360 +
Chr1	stalkie_big_nohaplotig	exon	39317581	39317843	100	+	.	Parent=FBgn0003138.1.mrna2;Target=FBgn0003138.1 361 623 +
Chr1	stalkie_big_nohaplotig	exon	39317922	39318147	100	+	.	Parent=FBgn0003138.1.mrna2;Target=FBgn0003138.1 624 849 +
Chr1	stalkie_big_nohaplotig	exon	39318962	39319105	100	+	.	Parent=FBgn0003138.1.mrna2;Target=FBgn0003138.1 850 993 +
Chr1	stalkie_big_nohaplotig	exon	39319205	39319764	100	+	.	Parent=FBgn0003138.1.mrna2;Target=FBgn0003138.1 994 1553 +
Chr1	stalkie_big_nohaplotig	exon	39319855	39320053	100	+	.	Parent=FBgn0003138.1.mrna2;Target=FBgn0003138.1 1554 1752 +
Chr1	stalkie_big_nohaplotig	CDS	39317348	39317521	.	+	0	Parent=FBgn0003138.1.mrna2;Target=FBgn0003138.1 187 360 +
Chr1	stalkie_big_nohaplotig	CDS	39317581	39317843	.	+	0	Parent=FBgn0003138.1.mrna2;Target=FBgn0003138.1 361 623 +
Chr1	stalkie_big_nohaplotig	CDS	39317922	39318147	.	+	1	Parent=FBgn0003138.1.mrna2;Target=FBgn0003138.1 624 849 +
Chr1	stalkie_big_nohaplotig	CDS	39318962	39319105	.	+	0	Parent=FBgn0003138.1.mrna2;Target=FBgn0003138.1 850 993 +
Chr1	stalkie_big_nohaplotig	CDS	39319205	39319764	.	+	0	Parent=FBgn0003138.1.mrna2;Target=FBgn0003138.1 994 1553 +
Chr1	stalkie_big_nohaplotig	CDS	39319855	39320053	.	+	1	Parent=FBgn0003138.1.mrna2;Target=FBgn0003138.1 1554 1752 +
Chr1	gffcl	locus	39321593	39322725	.	-	.	ID=RLOC_00007303;geneIDs=comp158730_c3_seq1.path1;transcripts=comp158730_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39321593	39322725	.	-	.	ID=comp158730_c3_seq1.mrna1;geneID=comp158730_c3_seq1.path1;Name=comp158730_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1125;mismatches=8;indels=1;unknowns=0;Target=comp158730_c3_seq1 1134 1 .;CDS_Target=comp158730_c3_seq1 470 279 .;locus=RLOC_00007303
Chr1	stalkie_big_nohaplotig	exon	39321593	39322725	99	-	.	Parent=comp158730_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39322257	39322448	.	-	0	Parent=comp158730_c3_seq1.mrna1
Chr1	gffcl	locus	39329179	39331008	.	+	.	ID=RLOC_00007304;geneIDs=FBgn0036666.1.path1;transcripts=FBgn0036666.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39329179	39331008	.	+	.	ID=FBgn0036666.1.mrna1;geneID=FBgn0036666.1.path1;Name=FBgn0036666.1;Dir=sensecoverage=100.0;identity=100.0;matches=1230;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007304
Chr1	stalkie_big_nohaplotig	exon	39329179	39329232	100	+	.	Parent=FBgn0036666.1.mrna1;Target=FBgn0036666.1 1 54 +
Chr1	stalkie_big_nohaplotig	exon	39329295	39329379	100	+	.	Parent=FBgn0036666.1.mrna1;Target=FBgn0036666.1 55 139 +
Chr1	stalkie_big_nohaplotig	exon	39329565	39329630	100	+	.	Parent=FBgn0036666.1.mrna1;Target=FBgn0036666.1 140 205 +
Chr1	stalkie_big_nohaplotig	exon	39329690	39329853	100	+	.	Parent=FBgn0036666.1.mrna1;Target=FBgn0036666.1 206 369 +
Chr1	stalkie_big_nohaplotig	exon	39329912	39330020	100	+	.	Parent=FBgn0036666.1.mrna1;Target=FBgn0036666.1 370 478 +
Chr1	stalkie_big_nohaplotig	exon	39330073	39330293	100	+	.	Parent=FBgn0036666.1.mrna1;Target=FBgn0036666.1 479 699 +
Chr1	stalkie_big_nohaplotig	exon	39330361	39330573	100	+	.	Parent=FBgn0036666.1.mrna1;Target=FBgn0036666.1 700 912 +
Chr1	stalkie_big_nohaplotig	exon	39330637	39330770	100	+	.	Parent=FBgn0036666.1.mrna1;Target=FBgn0036666.1 913 1046 +
Chr1	stalkie_big_nohaplotig	exon	39330825	39331008	100	+	.	Parent=FBgn0036666.1.mrna1;Target=FBgn0036666.1 1047 1230 +
Chr1	stalkie_big_nohaplotig	CDS	39329179	39329232	.	+	0	Parent=FBgn0036666.1.mrna1;Target=FBgn0036666.1 1 54 +
Chr1	stalkie_big_nohaplotig	CDS	39329295	39329379	.	+	0	Parent=FBgn0036666.1.mrna1;Target=FBgn0036666.1 55 139 +
Chr1	stalkie_big_nohaplotig	CDS	39329565	39329630	.	+	2	Parent=FBgn0036666.1.mrna1;Target=FBgn0036666.1 140 205 +
Chr1	stalkie_big_nohaplotig	CDS	39329690	39329853	.	+	2	Parent=FBgn0036666.1.mrna1;Target=FBgn0036666.1 206 369 +
Chr1	stalkie_big_nohaplotig	CDS	39329912	39330020	.	+	0	Parent=FBgn0036666.1.mrna1;Target=FBgn0036666.1 370 478 +
Chr1	stalkie_big_nohaplotig	CDS	39330073	39330293	.	+	2	Parent=FBgn0036666.1.mrna1;Target=FBgn0036666.1 479 699 +
Chr1	stalkie_big_nohaplotig	CDS	39330361	39330573	.	+	0	Parent=FBgn0036666.1.mrna1;Target=FBgn0036666.1 700 912 +
Chr1	stalkie_big_nohaplotig	CDS	39330637	39330770	.	+	0	Parent=FBgn0036666.1.mrna1;Target=FBgn0036666.1 913 1046 +
Chr1	stalkie_big_nohaplotig	CDS	39330825	39331008	.	+	1	Parent=FBgn0036666.1.mrna1;Target=FBgn0036666.1 1047 1230 +
Chr1	gffcl	locus	39333679	39334074	.	-	.	ID=RLOC_00007305;geneIDs=FBgn0036667.1.path1;transcripts=FBgn0036667.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39333679	39334074	.	-	.	ID=FBgn0036667.1.mrna1;geneID=FBgn0036667.1.path1;Name=FBgn0036667.1;Dir=sensecoverage=100.0;identity=100.0;matches=276;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007305
Chr1	stalkie_big_nohaplotig	exon	39333679	39333916	100	-	.	Parent=FBgn0036667.1.mrna1;Target=FBgn0036667.1 39 276 +
Chr1	stalkie_big_nohaplotig	exon	39334037	39334074	100	-	.	Parent=FBgn0036667.1.mrna1;Target=FBgn0036667.1 1 38 +
Chr1	stalkie_big_nohaplotig	CDS	39333679	39333916	.	-	1	Parent=FBgn0036667.1.mrna1;Target=FBgn0036667.1 39 276 +
Chr1	stalkie_big_nohaplotig	CDS	39334037	39334074	.	-	0	Parent=FBgn0036667.1.mrna1;Target=FBgn0036667.1 1 38 +
Chr1	gffcl	locus	39337183	39342626	.	+	.	ID=RLOC_00007306;geneIDs=FBgn0036668.path1;transcripts=FBgn0036668.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39337183	39342626	.	+	.	ID=FBgn0036668.mrna1;geneID=FBgn0036668.path1;Name=FBgn0036668;Dir=sensecoverage=100.0;identity=99.5;matches=2996;mismatches=4;indels=12;unknowns=0;locus=RLOC_00007306
Chr1	stalkie_big_nohaplotig	exon	39337183	39337594	100	+	.	Parent=FBgn0036668.mrna1;Target=FBgn0036668 1 412 +
Chr1	stalkie_big_nohaplotig	exon	39337660	39337862	100	+	.	Parent=FBgn0036668.mrna1;Target=FBgn0036668 413 615 +
Chr1	stalkie_big_nohaplotig	exon	39339043	39339180	100	+	.	Parent=FBgn0036668.mrna1;Target=FBgn0036668 616 753 +
Chr1	stalkie_big_nohaplotig	exon	39339243	39339638	99	+	.	Parent=FBgn0036668.mrna1;Target=FBgn0036668 754 1149 +
Chr1	stalkie_big_nohaplotig	exon	39340776	39342626	99	+	.	Parent=FBgn0036668.mrna1;Target=FBgn0036668 1150 3012 +
Chr1	stalkie_big_nohaplotig	CDS	39337183	39337594	.	+	0	Parent=FBgn0036668.mrna1;Target=FBgn0036668 1 412 +
Chr1	stalkie_big_nohaplotig	CDS	39337660	39337862	.	+	2	Parent=FBgn0036668.mrna1;Target=FBgn0036668 413 615 +
Chr1	stalkie_big_nohaplotig	CDS	39339043	39339180	.	+	0	Parent=FBgn0036668.mrna1;Target=FBgn0036668 616 753 +
Chr1	stalkie_big_nohaplotig	CDS	39339243	39339638	.	+	0	Parent=FBgn0036668.mrna1;Target=FBgn0036668 754 1149 +
Chr1	stalkie_big_nohaplotig	CDS	39340776	39342626	.	+	0	Parent=FBgn0036668.mrna1;Target=FBgn0036668 1150 3012 +
Chr1	gffcl	locus	39366366	39378320	.	-	.	ID=RLOC_00007307;geneIDs=FBgn0003249.1.path1;transcripts=FBgn0003249.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39366366	39378320	.	-	.	ID=FBgn0003249.1.mrna1;geneID=FBgn0003249.1.path1;Name=FBgn0003249.1;Dir=sensecoverage=100.0;identity=99.5;matches=1149;mismatches=6;indels=0;unknowns=0;locus=RLOC_00007307
Chr1	stalkie_big_nohaplotig	exon	39366366	39366904	98	-	.	Parent=FBgn0003249.1.mrna1;Target=FBgn0003249.1 617 1155 +
Chr1	stalkie_big_nohaplotig	exon	39377338	39377684	100	-	.	Parent=FBgn0003249.1.mrna1;Target=FBgn0003249.1 270 616 +
Chr1	stalkie_big_nohaplotig	exon	39377958	39378143	100	-	.	Parent=FBgn0003249.1.mrna1;Target=FBgn0003249.1 84 269 +
Chr1	stalkie_big_nohaplotig	exon	39378238	39378320	100	-	.	Parent=FBgn0003249.1.mrna1;Target=FBgn0003249.1 1 83 +
Chr1	stalkie_big_nohaplotig	CDS	39366366	39366904	.	-	2	Parent=FBgn0003249.1.mrna1;Target=FBgn0003249.1 617 1155 +
Chr1	stalkie_big_nohaplotig	CDS	39377338	39377684	.	-	1	Parent=FBgn0003249.1.mrna1;Target=FBgn0003249.1 270 616 +
Chr1	stalkie_big_nohaplotig	CDS	39377958	39378143	.	-	1	Parent=FBgn0003249.1.mrna1;Target=FBgn0003249.1 84 269 +
Chr1	stalkie_big_nohaplotig	CDS	39378238	39378320	.	-	0	Parent=FBgn0003249.1.mrna1;Target=FBgn0003249.1 1 83 +
Chr1	gffcl	locus	39371012	39371929	.	+	.	ID=RLOC_00007308;geneIDs=FBgn0003410.1.path1;transcripts=FBgn0003410.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39371012	39371929	.	+	.	ID=FBgn0003410.1.mrna1;geneID=FBgn0003410.1.path1;Name=FBgn0003410.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=918;mismatches=0;indels=0;unknowns=0;Target=FBgn0003410.1 918 1 .;locus=RLOC_00007308
Chr1	stalkie_big_nohaplotig	exon	39371012	39371929	100	+	.	Parent=FBgn0003410.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39371012	39371929	.	+	0	Parent=FBgn0003410.1.mrna1
Chr1	gffcl	locus	39373079	39373983	.	-	.	ID=RLOC_00007309;geneIDs=comp158383_c0_seq1.path1;transcripts=comp158383_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39373079	39373983	.	-	.	ID=comp158383_c0_seq1.mrna1;geneID=comp158383_c0_seq1.path1;Name=comp158383_c0_seq1;Dir=indeterminatecoverage=97.7;identity=98.3;matches=901;mismatches=4;indels=12;unknowns=0;Target=comp158383_c0_seq1 917 1 .;CDS_Target=comp158383_c0_seq1 889 803 .;locus=RLOC_00007309
Chr1	stalkie_big_nohaplotig	exon	39373079	39373983	98	-	.	Parent=comp158383_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39373107	39373193	.	-	0	Parent=comp158383_c0_seq1.mrna1
Chr1	gffcl	locus	39374127	39374875	.	+	.	ID=RLOC_00007310;geneIDs=comp142776_c0_seq1.path1;transcripts=comp142776_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39374127	39374875	.	+	.	ID=comp142776_c0_seq1.mrna1;geneID=comp142776_c0_seq1.path1;Name=comp142776_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=748;mismatches=1;indels=0;unknowns=0;Target=comp142776_c0_seq1 750 2 .;CDS_Target=comp142776_c0_seq1 748 596 .;locus=RLOC_00007310
Chr1	stalkie_big_nohaplotig	exon	39374127	39374875	99	+	.	Parent=comp142776_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39374721	39374873	.	+	0	Parent=comp142776_c0_seq1.mrna1
Chr1	gffcl	locus	39375232	39375617	.	+	.	ID=RLOC_00007311;geneIDs=comp117512_c0_seq1.path1;transcripts=comp117512_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39375232	39375617	.	+	.	ID=comp117512_c0_seq1.mrna1;geneID=comp117512_c0_seq1.path1;Name=comp117512_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=386;mismatches=0;indels=0;unknowns=0;Target=comp117512_c0_seq1 386 1 .;CDS_Target=comp117512_c0_seq1 24 1 .;locus=RLOC_00007311
Chr1	stalkie_big_nohaplotig	exon	39375232	39375617	100	+	.	Parent=comp117512_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39375232	39375255	.	+	0	Parent=comp117512_c0_seq1.mrna1
Chr1	gffcl	locus	39381532	39382169	.	+	.	ID=RLOC_00007312;geneIDs=comp144999_c1_seq1.path1;transcripts=comp144999_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39381532	39382169	.	+	.	ID=comp144999_c1_seq1.mrna1;geneID=comp144999_c1_seq1.path1;Name=comp144999_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=638;mismatches=0;indels=1;unknowns=0;Target=comp144999_c1_seq1 639 1 .;CDS_Target=comp144999_c1_seq1 250 116 .;locus=RLOC_00007312
Chr1	stalkie_big_nohaplotig	exon	39381532	39382169	99	+	.	Parent=comp144999_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39381647	39381781	.	+	0	Parent=comp144999_c1_seq1.mrna1
Chr1	gffcl	locus	39413972	41248935	.	-	.	ID=RLOC_00007313;geneIDs=comp134846_c0_seq1.path1;transcripts=comp134846_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39413972	41248935	.	-	.	ID=comp134846_c0_seq1.mrna1;geneID=comp134846_c0_seq1.path1;Name=comp134846_c0_seq1;Dir=indeterminatecoverage=81.5;identity=98.7;matches=378;mismatches=5;indels=0;unknowns=0;Target=comp134846_c0_seq1 264 211 .;locus=RLOC_00007313
Chr1	stalkie_big_nohaplotig	exon	39413972	39413979	100	-	.	Parent=comp134846_c0_seq1.mrna1;Target=comp134846_c0_seq1 383 376 .
Chr1	stalkie_big_nohaplotig	exon	39415579	39415586	100	-	.	Parent=comp134846_c0_seq1.mrna1;Target=comp134846_c0_seq1 375 368 .
Chr1	stalkie_big_nohaplotig	exon	39419607	39419612	100	-	.	Parent=comp134846_c0_seq1.mrna1;Target=comp134846_c0_seq1 367 362 .
Chr1	stalkie_big_nohaplotig	exon	39420910	39420913	100	-	.	Parent=comp134846_c0_seq1.mrna1;Target=comp134846_c0_seq1 361 358 .
Chr1	stalkie_big_nohaplotig	exon	39435533	39435541	100	-	.	Parent=comp134846_c0_seq1.mrna1;Target=comp134846_c0_seq1 357 349 .
Chr1	stalkie_big_nohaplotig	exon	41248588	41248935	98	-	.	Parent=comp134846_c0_seq1.mrna1;Target=comp134846_c0_seq1 348 1 .
Chr1	stalkie_big_nohaplotig	CDS	41248672	41248725	.	-	0	Parent=comp134846_c0_seq1.mrna1
Chr1	gffcl	locus	39425800	41401267	.	.	.	ID=RLOC_00007314;geneIDs=FBgn0000182.path1,FBgn0036801.1.path1,FBgn0052170.1.path1,comp134746_c0_seq1.path1,comp157597_c1_seq1.path1;transcripts=FBgn0000182.mrna1,comp134746_c0_seq1.mrna1,FBgn0036801.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39427174	41401261	.	+	.	ID=FBgn0000182.mrna1;geneID=FBgn0000182.path1;Name=FBgn0000182;Dir=indeterminatecoverage=15.0;identity=100.0;matches=162;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007314
Chr1	stalkie_big_nohaplotig	exon	39427174	39427324	100	+	.	Parent=FBgn0000182.mrna1;Target=FBgn0000182 151 1 .
Chr1	stalkie_big_nohaplotig	exon	41401251	41401261	100	+	.	Parent=FBgn0000182.mrna1;Target=FBgn0000182 162 152 .
Chr1	stalkie_big_nohaplotig	CDS	39427174	39427324	.	+	0	Parent=FBgn0000182.mrna1;Target=FBgn0000182 151 1 .
Chr1	stalkie_big_nohaplotig	CDS	41401251	41401261	.	+	2	Parent=FBgn0000182.mrna1;Target=FBgn0000182 162 152 .
Chr1	stalkie_big_nohaplotig	mRNA	39427308	39427916	.	+	.	ID=comp134746_c0_seq1.mrna1;geneID=comp134746_c0_seq1.path1;Name=comp134746_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=609;mismatches=0;indels=0;unknowns=0;Target=comp134746_c0_seq1 609 1 .;CDS_Target=comp134746_c0_seq1 456 1 .;locus=RLOC_00007314
Chr1	stalkie_big_nohaplotig	exon	39427308	39427916	100	+	.	Parent=comp134746_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39427308	39427763	.	+	0	Parent=comp134746_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41397979	41401267	.	+	.	ID=FBgn0036801.1.mrna1;geneID=FBgn0036801.1.path1;Name=FBgn0036801.1;Dir=sensecoverage=100.0;identity=100.0;matches=1452;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007314
Chr1	stalkie_big_nohaplotig	exon	41397979	41398136	100	+	.	Parent=FBgn0036801.1.mrna1;Target=FBgn0036801.1 1 158 +
Chr1	stalkie_big_nohaplotig	exon	41398225	41398873	100	+	.	Parent=FBgn0036801.1.mrna1;Target=FBgn0036801.1 159 807 +
Chr1	stalkie_big_nohaplotig	exon	41400419	41400544	100	+	.	Parent=FBgn0036801.1.mrna1;Target=FBgn0036801.1 808 933 +
Chr1	stalkie_big_nohaplotig	exon	41400611	41400686	100	+	.	Parent=FBgn0036801.1.mrna1;Target=FBgn0036801.1 934 1009 +
Chr1	stalkie_big_nohaplotig	exon	41400752	41400872	100	+	.	Parent=FBgn0036801.1.mrna1;Target=FBgn0036801.1 1010 1130 +
Chr1	stalkie_big_nohaplotig	exon	41400946	41401267	100	+	.	Parent=FBgn0036801.1.mrna1;Target=FBgn0036801.1 1131 1452 +
Chr1	stalkie_big_nohaplotig	CDS	41397979	41398136	.	+	0	Parent=FBgn0036801.1.mrna1;Target=FBgn0036801.1 1 158 +
Chr1	stalkie_big_nohaplotig	CDS	41398225	41398873	.	+	1	Parent=FBgn0036801.1.mrna1;Target=FBgn0036801.1 159 807 +
Chr1	stalkie_big_nohaplotig	CDS	41400419	41400544	.	+	0	Parent=FBgn0036801.1.mrna1;Target=FBgn0036801.1 808 933 +
Chr1	stalkie_big_nohaplotig	CDS	41400611	41400686	.	+	0	Parent=FBgn0036801.1.mrna1;Target=FBgn0036801.1 934 1009 +
Chr1	stalkie_big_nohaplotig	CDS	41400752	41400872	.	+	2	Parent=FBgn0036801.1.mrna1;Target=FBgn0036801.1 1010 1130 +
Chr1	stalkie_big_nohaplotig	CDS	41400946	41401267	.	+	1	Parent=FBgn0036801.1.mrna1;Target=FBgn0036801.1 1131 1452 +
Chr1	gffcl	locus	39458079	39458717	.	-	.	ID=RLOC_00007315;geneIDs=comp134888_c0_seq1.path1;transcripts=comp134888_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39458079	39458717	.	-	.	ID=comp134888_c0_seq1.mrna1;geneID=comp134888_c0_seq1.path1;Name=comp134888_c0_seq1;Dir=indeterminatecoverage=96.8;identity=98.9;matches=632;mismatches=7;indels=0;unknowns=0;Target=comp134888_c0_seq1 660 22 .;CDS_Target=comp134888_c0_seq1 297 172 .;locus=RLOC_00007315
Chr1	stalkie_big_nohaplotig	exon	39458079	39458717	98	-	.	Parent=comp134888_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39458442	39458567	.	-	0	Parent=comp134888_c0_seq1.mrna1
Chr1	gffcl	locus	39499698	39556088	.	+	.	ID=RLOC_00007316;geneIDs=FBgn0261565.1.path1;transcripts=FBgn0261565.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39499698	39556088	.	+	.	ID=FBgn0261565.1.mrna1;geneID=FBgn0261565.1.path1;Name=FBgn0261565.1;Dir=sensecoverage=100.0;identity=96.5;matches=1209;mismatches=22;indels=22;unknowns=0;locus=RLOC_00007316
Chr1	stalkie_big_nohaplotig	exon	39499698	39499873	100	+	.	Parent=FBgn0261565.1.mrna1;Target=FBgn0261565.1 1 176 +
Chr1	stalkie_big_nohaplotig	exon	39502778	39503154	99	+	.	Parent=FBgn0261565.1.mrna1;Target=FBgn0261565.1 177 553 +
Chr1	stalkie_big_nohaplotig	exon	39503226	39503470	99	+	.	Parent=FBgn0261565.1.mrna1;Target=FBgn0261565.1 554 798 +
Chr1	stalkie_big_nohaplotig	exon	39509438	39509455	72	+	.	Parent=FBgn0261565.1.mrna1;Target=FBgn0261565.1 964 978 +
Chr1	stalkie_big_nohaplotig	exon	39509923	39509970	44	+	.	Parent=FBgn0261565.1.mrna1;Target=FBgn0261565.1 979 1045 +
Chr1	stalkie_big_nohaplotig	exon	39511975	39511985	100	+	.	Parent=FBgn0261565.1.mrna1;Target=FBgn0261565.1 1046 1056 +
Chr1	stalkie_big_nohaplotig	exon	39532258	39532262	100	+	.	Parent=FBgn0261565.1.mrna1;Target=FBgn0261565.1 1182 1186 +
Chr1	stalkie_big_nohaplotig	exon	39538132	39538141	100	+	.	Parent=FBgn0261565.1.mrna1;Target=FBgn0261565.1 1187 1196 +
Chr1	stalkie_big_nohaplotig	exon	39554876	39555062	100	+	.	Parent=FBgn0261565.1.mrna1;Target=FBgn0261565.1 1345 1531 +
Chr1	stalkie_big_nohaplotig	exon	39555934	39556088	100	+	.	Parent=FBgn0261565.1.mrna1;Target=FBgn0261565.1 1532 1686 +
Chr1	stalkie_big_nohaplotig	CDS	39499698	39499873	.	+	0	Parent=FBgn0261565.1.mrna1;Target=FBgn0261565.1 1 176 +
Chr1	stalkie_big_nohaplotig	CDS	39502778	39503154	.	+	1	Parent=FBgn0261565.1.mrna1;Target=FBgn0261565.1 177 553 +
Chr1	stalkie_big_nohaplotig	CDS	39503226	39503470	.	+	2	Parent=FBgn0261565.1.mrna1;Target=FBgn0261565.1 554 798 +
Chr1	stalkie_big_nohaplotig	CDS	39509438	39509455	.	+	0	Parent=FBgn0261565.1.mrna1;Target=FBgn0261565.1 964 978 +
Chr1	stalkie_big_nohaplotig	CDS	39509923	39509970	.	+	0	Parent=FBgn0261565.1.mrna1;Target=FBgn0261565.1 979 1045 +
Chr1	stalkie_big_nohaplotig	CDS	39511975	39511985	.	+	0	Parent=FBgn0261565.1.mrna1;Target=FBgn0261565.1 1046 1056 +
Chr1	stalkie_big_nohaplotig	CDS	39532258	39532262	.	+	1	Parent=FBgn0261565.1.mrna1;Target=FBgn0261565.1 1182 1186 +
Chr1	stalkie_big_nohaplotig	CDS	39538132	39538141	.	+	2	Parent=FBgn0261565.1.mrna1;Target=FBgn0261565.1 1187 1196 +
Chr1	stalkie_big_nohaplotig	CDS	39554876	39555062	.	+	1	Parent=FBgn0261565.1.mrna1;Target=FBgn0261565.1 1345 1531 +
Chr1	stalkie_big_nohaplotig	CDS	39555934	39556088	.	+	0	Parent=FBgn0261565.1.mrna1;Target=FBgn0261565.1 1532 1686 +
Chr1	gffcl	locus	39513000	39515841	.	+	.	ID=RLOC_00007317;geneIDs=FBgn0261565.2.path1;transcripts=FBgn0261565.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39513000	39515841	.	+	.	ID=FBgn0261565.2.mrna1;geneID=FBgn0261565.2.path1;Name=FBgn0261565.2;Dir=sensecoverage=99.7;identity=100.0;matches=2782;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007317
Chr1	stalkie_big_nohaplotig	exon	39513000	39515729	100	+	.	Parent=FBgn0261565.2.mrna1;Target=FBgn0261565.2 1 2730 +
Chr1	stalkie_big_nohaplotig	exon	39515790	39515841	100	+	.	Parent=FBgn0261565.2.mrna1;Target=FBgn0261565.2 2731 2782 +
Chr1	stalkie_big_nohaplotig	CDS	39513000	39515729	.	+	0	Parent=FBgn0261565.2.mrna1;Target=FBgn0261565.2 1 2730 +
Chr1	stalkie_big_nohaplotig	CDS	39515790	39515840	.	+	0	Parent=FBgn0261565.2.mrna1;Target=FBgn0261565.2 2731 2781 +
Chr1	gffcl	locus	39558734	39568856	.	+	.	ID=RLOC_00007318;geneIDs=FBgn0015218.2.path1,comp147967_c0_seq1.path1;transcripts=comp147967_c0_seq1.mrna1,FBgn0015218.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39558734	39565790	.	+	.	ID=comp147967_c0_seq1.mrna1;geneID=comp147967_c0_seq1.path1;Name=comp147967_c0_seq1;Dir=antisensecoverage=100.0;identity=98.3;matches=350;mismatches=5;indels=1;unknowns=0;locus=RLOC_00007318
Chr1	stalkie_big_nohaplotig	exon	39558734	39559069	98	+	.	Parent=comp147967_c0_seq1.mrna1;Target=comp147967_c0_seq1 20 356 -
Chr1	stalkie_big_nohaplotig	exon	39565772	39565790	100	+	.	Parent=comp147967_c0_seq1.mrna1;Target=comp147967_c0_seq1 1 19 -
Chr1	stalkie_big_nohaplotig	CDS	39559046	39559069	.	+	0	Parent=comp147967_c0_seq1.mrna1;Target=comp147967_c0_seq1 20 44 .
Chr1	stalkie_big_nohaplotig	CDS	39565772	39565788	.	+	0	Parent=comp147967_c0_seq1.mrna1;Target=comp147967_c0_seq1 3 19 .
Chr1	stalkie_big_nohaplotig	mRNA	39565627	39568856	.	+	.	ID=FBgn0015218.2.mrna1;geneID=FBgn0015218.2.path1;Name=FBgn0015218.2;Dir=sensecoverage=100.0;identity=100.0;matches=717;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007318
Chr1	stalkie_big_nohaplotig	exon	39565627	39565698	100	+	.	Parent=FBgn0015218.2.mrna1;Target=FBgn0015218.2 1 72 +
Chr1	stalkie_big_nohaplotig	exon	39565772	39565995	100	+	.	Parent=FBgn0015218.2.mrna1;Target=FBgn0015218.2 73 296 +
Chr1	stalkie_big_nohaplotig	exon	39568200	39568274	100	+	.	Parent=FBgn0015218.2.mrna1;Target=FBgn0015218.2 297 371 +
Chr1	stalkie_big_nohaplotig	exon	39568363	39568462	100	+	.	Parent=FBgn0015218.2.mrna1;Target=FBgn0015218.2 372 471 +
Chr1	stalkie_big_nohaplotig	exon	39568530	39568617	100	+	.	Parent=FBgn0015218.2.mrna1;Target=FBgn0015218.2 472 559 +
Chr1	stalkie_big_nohaplotig	exon	39568699	39568856	100	+	.	Parent=FBgn0015218.2.mrna1;Target=FBgn0015218.2 560 717 +
Chr1	stalkie_big_nohaplotig	CDS	39565627	39565698	.	+	0	Parent=FBgn0015218.2.mrna1;Target=FBgn0015218.2 1 72 +
Chr1	stalkie_big_nohaplotig	CDS	39565772	39565995	.	+	0	Parent=FBgn0015218.2.mrna1;Target=FBgn0015218.2 73 296 +
Chr1	stalkie_big_nohaplotig	CDS	39568200	39568274	.	+	1	Parent=FBgn0015218.2.mrna1;Target=FBgn0015218.2 297 371 +
Chr1	stalkie_big_nohaplotig	CDS	39568363	39568462	.	+	1	Parent=FBgn0015218.2.mrna1;Target=FBgn0015218.2 372 471 +
Chr1	stalkie_big_nohaplotig	CDS	39568530	39568617	.	+	0	Parent=FBgn0015218.2.mrna1;Target=FBgn0015218.2 472 559 +
Chr1	stalkie_big_nohaplotig	CDS	39568699	39568856	.	+	2	Parent=FBgn0015218.2.mrna1;Target=FBgn0015218.2 560 717 +
Chr1	gffcl	locus	39564221	39565226	.	+	.	ID=RLOC_00007319;geneIDs=comp145376_c2_seq1.path1;transcripts=comp145376_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39564221	39565226	.	+	.	ID=comp145376_c2_seq1.mrna1;geneID=comp145376_c2_seq1.path1;Name=comp145376_c2_seq1;Dir=indeterminatecoverage=98.4;identity=99.7;matches=1004;mismatches=2;indels=1;unknowns=0;Target=comp145376_c2_seq1 1022 16 .;CDS_Target=comp145376_c2_seq1 121 17 .;locus=RLOC_00007319
Chr1	stalkie_big_nohaplotig	exon	39564221	39565226	99	+	.	Parent=comp145376_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39564222	39564325	.	+	0	Parent=comp145376_c2_seq1.mrna1
Chr1	gffcl	locus	39572469	39622542	.	+	.	ID=RLOC_00007321;geneIDs=FBgn0035983.1.path1;transcripts=FBgn0035983.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39572469	39622542	.	+	.	ID=FBgn0035983.1.mrna1;geneID=FBgn0035983.1.path1;Name=FBgn0035983.1;Dir=sensecoverage=100.0;identity=99.8;matches=1883;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007321
Chr1	stalkie_big_nohaplotig	exon	39572469	39572563	100	+	.	Parent=FBgn0035983.1.mrna1;Target=FBgn0035983.1 1 95 +
Chr1	stalkie_big_nohaplotig	exon	39616706	39616937	100	+	.	Parent=FBgn0035983.1.mrna1;Target=FBgn0035983.1 96 327 +
Chr1	stalkie_big_nohaplotig	exon	39617372	39617516	100	+	.	Parent=FBgn0035983.1.mrna1;Target=FBgn0035983.1 328 472 +
Chr1	stalkie_big_nohaplotig	exon	39617601	39617721	100	+	.	Parent=FBgn0035983.1.mrna1;Target=FBgn0035983.1 473 593 +
Chr1	stalkie_big_nohaplotig	exon	39621187	39621857	99	+	.	Parent=FBgn0035983.1.mrna1;Target=FBgn0035983.1 594 1264 +
Chr1	stalkie_big_nohaplotig	exon	39621920	39622542	100	+	.	Parent=FBgn0035983.1.mrna1;Target=FBgn0035983.1 1265 1887 +
Chr1	stalkie_big_nohaplotig	CDS	39572469	39572563	.	+	0	Parent=FBgn0035983.1.mrna1;Target=FBgn0035983.1 1 95 +
Chr1	stalkie_big_nohaplotig	CDS	39616706	39616937	.	+	1	Parent=FBgn0035983.1.mrna1;Target=FBgn0035983.1 96 327 +
Chr1	stalkie_big_nohaplotig	CDS	39617372	39617516	.	+	0	Parent=FBgn0035983.1.mrna1;Target=FBgn0035983.1 328 472 +
Chr1	stalkie_big_nohaplotig	CDS	39617601	39617721	.	+	2	Parent=FBgn0035983.1.mrna1;Target=FBgn0035983.1 473 593 +
Chr1	stalkie_big_nohaplotig	CDS	39621187	39621857	.	+	1	Parent=FBgn0035983.1.mrna1;Target=FBgn0035983.1 594 1264 +
Chr1	stalkie_big_nohaplotig	CDS	39621920	39622542	.	+	2	Parent=FBgn0035983.1.mrna1;Target=FBgn0035983.1 1265 1887 +
Chr1	gffcl	locus	39593965	39594255	.	-	.	ID=RLOC_00007322;geneIDs=comp140537_c0_seq1.path1;transcripts=comp140537_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39593965	39594255	.	-	.	ID=comp140537_c0_seq1.mrna1;geneID=comp140537_c0_seq1.path1;Name=comp140537_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=291;mismatches=0;indels=0;unknowns=0;Target=comp140537_c0_seq1 291 1 .;CDS_Target=comp140537_c0_seq1 177 43 .;locus=RLOC_00007322
Chr1	stalkie_big_nohaplotig	exon	39593965	39594255	100	-	.	Parent=comp140537_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39594079	39594213	.	-	0	Parent=comp140537_c0_seq1.mrna1
Chr1	gffcl	locus	39623026	39623961	.	-	.	ID=RLOC_00007323;geneIDs=comp136696_c0_seq1.path1;transcripts=comp136696_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39623026	39623961	.	-	.	ID=comp136696_c0_seq1.mrna1;geneID=comp136696_c0_seq1.path1;Name=comp136696_c0_seq1;Dir=indeterminatecoverage=99.2;identity=97.7;matches=915;mismatches=1;indels=21;unknowns=0;Target=comp136696_c0_seq1 924 8 .;CDS_Target=comp136696_c0_seq1 537 472 .;locus=RLOC_00007323
Chr1	stalkie_big_nohaplotig	exon	39623026	39623961	97	-	.	Parent=comp136696_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39623432	39623497	.	-	0	Parent=comp136696_c0_seq1.mrna1
Chr1	gffcl	locus	39624625	39626594	.	-	.	ID=RLOC_00007324;geneIDs=comp161643_c2_seq1.path1;transcripts=comp161643_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39624625	39626594	.	-	.	ID=comp161643_c2_seq1.mrna1;geneID=comp161643_c2_seq1.path1;Name=comp161643_c2_seq1;Dir=indeterminatecoverage=99.7;identity=98.0;matches=1941;mismatches=29;indels=10;unknowns=0;Target=comp161643_c2_seq1 1985 6 .;CDS_Target=comp161643_c2_seq1 631 476 .;locus=RLOC_00007324
Chr1	stalkie_big_nohaplotig	exon	39624625	39626594	98	-	.	Parent=comp161643_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39625970	39626124	.	-	0	Parent=comp161643_c2_seq1.mrna1
Chr1	gffcl	locus	39637042	39637618	.	-	.	ID=RLOC_00007326;geneIDs=comp152960_c0_seq1.path1;transcripts=comp152960_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39637042	39637618	.	-	.	ID=comp152960_c0_seq1.mrna1;geneID=comp152960_c0_seq1.path1;Name=comp152960_c0_seq1;Dir=indeterminatecoverage=56.5;identity=99.1;matches=572;mismatches=5;indels=0;unknowns=0;Target=comp152960_c0_seq1 577 1 .;CDS_Target=comp152960_c0_seq1 358 2 .;locus=RLOC_00007326
Chr1	stalkie_big_nohaplotig	exon	39637042	39637618	99	-	.	Parent=comp152960_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39637261	39637617	.	-	0	Parent=comp152960_c0_seq1.mrna1
Chr1	gffcl	locus	39642268	39643098	.	+	.	ID=RLOC_00007327;geneIDs=FBgn0001227.1.path1;transcripts=FBgn0001227.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39642268	39643098	.	+	.	ID=FBgn0001227.1.mrna1;geneID=FBgn0001227.1.path1;Name=FBgn0001227.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=831;mismatches=0;indels=0;unknowns=0;Target=FBgn0001227.1 831 1 .;locus=RLOC_00007327
Chr1	stalkie_big_nohaplotig	exon	39642268	39643098	100	+	.	Parent=FBgn0001227.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39642268	39643098	.	+	0	Parent=FBgn0001227.1.mrna1
Chr1	gffcl	locus	39643106	39644201	.	+	.	ID=RLOC_00007328;geneIDs=comp146558_c1_seq1.path1;transcripts=comp146558_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39643106	39644201	.	+	.	ID=comp146558_c1_seq1.mrna1;geneID=comp146558_c1_seq1.path1;Name=comp146558_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1095;mismatches=1;indels=4;unknowns=0;Target=comp146558_c1_seq1 1100 1 .;CDS_Target=comp146558_c1_seq1 650 3 .;locus=RLOC_00007328
Chr1	stalkie_big_nohaplotig	exon	39643106	39644201	99	+	.	Parent=comp146558_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39643108	39643752	.	+	0	Parent=comp146558_c1_seq1.mrna1
Chr1	gffcl	locus	39647082	39647669	.	-	.	ID=RLOC_00007329;geneIDs=FBgn0035982.1.path1;transcripts=FBgn0035982.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39647082	39647669	.	-	.	ID=FBgn0035982.1.mrna1;geneID=FBgn0035982.1.path1;Name=FBgn0035982.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=588;mismatches=0;indels=0;unknowns=0;Target=FBgn0035982.1 588 1 .;locus=RLOC_00007329
Chr1	stalkie_big_nohaplotig	exon	39647082	39647669	100	-	.	Parent=FBgn0035982.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39647082	39647669	.	-	0	Parent=FBgn0035982.1.mrna1
Chr1	gffcl	locus	39651073	39651561	.	-	.	ID=RLOC_00007330;geneIDs=FBgn0001224.1.path1;transcripts=FBgn0001224.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39651073	39651561	.	-	.	ID=FBgn0001224.1.mrna1;geneID=FBgn0001224.1.path1;Name=FBgn0001224.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=489;mismatches=0;indels=0;unknowns=0;Target=FBgn0001224.1 489 1 .;locus=RLOC_00007330
Chr1	stalkie_big_nohaplotig	exon	39651073	39651561	100	-	.	Parent=FBgn0001224.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39651073	39651561	.	-	0	Parent=FBgn0001224.1.mrna1
Chr1	gffcl	locus	39655262	39730219	.	+	.	ID=RLOC_00007331;geneIDs=FBgn0001225.1.path1,comp155292_c0_seq1.path1;transcripts=comp155292_c0_seq1.mrna1,FBgn0001225.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39655262	39730219	.	+	.	ID=comp155292_c0_seq1.mrna1;geneID=comp155292_c0_seq1.path1;Name=comp155292_c0_seq1;Dir=sensecoverage=85.9;identity=98.5;matches=2717;mismatches=22;indels=20;unknowns=0;locus=RLOC_00007331
Chr1	stalkie_big_nohaplotig	exon	39655262	39655265	100	+	.	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 451 454 +
Chr1	stalkie_big_nohaplotig	exon	39658542	39658544	100	+	.	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 455 457 +
Chr1	stalkie_big_nohaplotig	exon	39663629	39663637	100	+	.	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 458 466 +
Chr1	stalkie_big_nohaplotig	exon	39666407	39666408	100	+	.	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 467 468 +
Chr1	stalkie_big_nohaplotig	exon	39679425	39679435	90	+	.	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 469 479 +
Chr1	stalkie_big_nohaplotig	exon	39679898	39679903	100	+	.	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 480 485 +
Chr1	stalkie_big_nohaplotig	exon	39683842	39683847	100	+	.	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 486 491 +
Chr1	stalkie_big_nohaplotig	exon	39691943	39691947	100	+	.	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 492 496 +
Chr1	stalkie_big_nohaplotig	exon	39700669	39700712	54	+	.	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 497 533 +
Chr1	stalkie_big_nohaplotig	exon	39708743	39708764	54	+	.	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 534 564 +
Chr1	stalkie_big_nohaplotig	exon	39722925	39723206	97	+	.	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 565 846 +
Chr1	stalkie_big_nohaplotig	exon	39723324	39724028	100	+	.	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 847 1551 +
Chr1	stalkie_big_nohaplotig	exon	39724347	39724483	100	+	.	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 1552 1688 +
Chr1	stalkie_big_nohaplotig	exon	39724546	39724662	100	+	.	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 1689 1805 +
Chr1	stalkie_big_nohaplotig	exon	39725425	39726124	100	+	.	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 1806 2505 +
Chr1	stalkie_big_nohaplotig	exon	39728390	39728534	100	+	.	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 2506 2650 +
Chr1	stalkie_big_nohaplotig	exon	39728640	39729040	100	+	.	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 2651 3051 +
Chr1	stalkie_big_nohaplotig	exon	39730071	39730219	100	+	.	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 3052 3200 +
Chr1	stalkie_big_nohaplotig	CDS	39723334	39724028	.	+	0	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 857 1551 +
Chr1	stalkie_big_nohaplotig	CDS	39724347	39724483	.	+	1	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 1552 1688 +
Chr1	stalkie_big_nohaplotig	CDS	39724546	39724662	.	+	2	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 1689 1805 +
Chr1	stalkie_big_nohaplotig	CDS	39725425	39726124	.	+	2	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 1806 2505 +
Chr1	stalkie_big_nohaplotig	CDS	39728390	39728534	.	+	1	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 2506 2650 +
Chr1	stalkie_big_nohaplotig	CDS	39728640	39729040	.	+	0	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 2651 3051 +
Chr1	stalkie_big_nohaplotig	CDS	39730071	39730218	.	+	1	Parent=comp155292_c0_seq1.mrna1;Target=comp155292_c0_seq1 3052 3199 +
Chr1	stalkie_big_nohaplotig	mRNA	39679684	39680286	.	+	.	ID=FBgn0001225.1.mrna1;geneID=FBgn0001225.1.path1;Name=FBgn0001225.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=603;mismatches=0;indels=0;unknowns=0;Target=FBgn0001225.1 603 1 .;locus=RLOC_00007331
Chr1	stalkie_big_nohaplotig	exon	39679684	39680286	100	+	.	Parent=FBgn0001225.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39679684	39680286	.	+	0	Parent=FBgn0001225.1.mrna1
Chr1	gffcl	locus	39659301	39683194	.	-	.	ID=RLOC_00007332;geneIDs=FBgn0038080.2.path1;transcripts=FBgn0038080.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39659301	39683194	.	-	.	ID=FBgn0038080.2.mrna1;geneID=FBgn0038080.2.path1;Name=FBgn0038080.2;Dir=sensecoverage=100.0;identity=99.5;matches=582;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007332
Chr1	stalkie_big_nohaplotig	exon	39659301	39659352	100	-	.	Parent=FBgn0038080.2.mrna1;Target=FBgn0038080.2 534 585 +
Chr1	stalkie_big_nohaplotig	exon	39660288	39660417	97	-	.	Parent=FBgn0038080.2.mrna1;Target=FBgn0038080.2 404 533 +
Chr1	stalkie_big_nohaplotig	exon	39670385	39670414	100	-	.	Parent=FBgn0038080.2.mrna1;Target=FBgn0038080.2 374 403 +
Chr1	stalkie_big_nohaplotig	exon	39672850	39672982	100	-	.	Parent=FBgn0038080.2.mrna1;Target=FBgn0038080.2 241 373 +
Chr1	stalkie_big_nohaplotig	exon	39682955	39683194	100	-	.	Parent=FBgn0038080.2.mrna1;Target=FBgn0038080.2 1 240 +
Chr1	stalkie_big_nohaplotig	CDS	39659301	39659352	.	-	1	Parent=FBgn0038080.2.mrna1;Target=FBgn0038080.2 534 585 +
Chr1	stalkie_big_nohaplotig	CDS	39660288	39660417	.	-	2	Parent=FBgn0038080.2.mrna1;Target=FBgn0038080.2 404 533 +
Chr1	stalkie_big_nohaplotig	CDS	39670385	39670414	.	-	2	Parent=FBgn0038080.2.mrna1;Target=FBgn0038080.2 374 403 +
Chr1	stalkie_big_nohaplotig	CDS	39672850	39672982	.	-	0	Parent=FBgn0038080.2.mrna1;Target=FBgn0038080.2 241 373 +
Chr1	stalkie_big_nohaplotig	CDS	39682955	39683194	.	-	0	Parent=FBgn0038080.2.mrna1;Target=FBgn0038080.2 1 240 +
Chr1	gffcl	locus	39689167	39689428	.	-	.	ID=RLOC_00007333;geneIDs=comp112717_c0_seq1.path1;transcripts=comp112717_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39689167	39689428	.	-	.	ID=comp112717_c0_seq1.mrna1;geneID=comp112717_c0_seq1.path1;Name=comp112717_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.9;matches=261;mismatches=1;indels=2;unknowns=0;Target=comp112717_c0_seq1 264 1 .;CDS_Target=comp112717_c0_seq1 53 3 .;locus=RLOC_00007333
Chr1	stalkie_big_nohaplotig	exon	39689167	39689428	98	-	.	Parent=comp112717_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39689376	39689426	.	-	0	Parent=comp112717_c0_seq1.mrna1
Chr1	gffcl	locus	39701651	39702211	.	+	.	ID=RLOC_00007334;geneIDs=FBgn0001229.1.path1;transcripts=FBgn0001229.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39701651	39702211	.	+	.	ID=FBgn0001229.1.mrna1;geneID=FBgn0001229.1.path1;Name=FBgn0001229.1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=554;mismatches=7;indels=0;unknowns=0;Target=FBgn0001229.1 561 1 .;locus=RLOC_00007334
Chr1	stalkie_big_nohaplotig	exon	39701651	39702211	98	+	.	Parent=FBgn0001229.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39701651	39702211	.	+	0	Parent=FBgn0001229.1.mrna1
Chr1	gffcl	locus	39734045	39734836	.	+	.	ID=RLOC_00007336;geneIDs=comp144473_c0_seq1.path1;transcripts=comp144473_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39734045	39734836	.	+	.	ID=comp144473_c0_seq1.mrna1;geneID=comp144473_c0_seq1.path1;Name=comp144473_c0_seq1;Dir=indeterminatecoverage=98.0;identity=100.0;matches=792;mismatches=0;indels=0;unknowns=0;Target=comp144473_c0_seq1 808 17 .;CDS_Target=comp144473_c0_seq1 593 480 .;locus=RLOC_00007336
Chr1	stalkie_big_nohaplotig	exon	39734045	39734836	100	+	.	Parent=comp144473_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39734508	39734621	.	+	0	Parent=comp144473_c0_seq1.mrna1
Chr1	gffcl	locus	39756822	39759065	.	+	.	ID=RLOC_00007338;geneIDs=FBgn0029113.1.path1;transcripts=FBgn0029113.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39756822	39759065	.	+	.	ID=FBgn0029113.1.mrna1;geneID=FBgn0029113.1.path1;Name=FBgn0029113.1;Dir=sensecoverage=100.0;identity=100.0;matches=2057;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007338
Chr1	stalkie_big_nohaplotig	exon	39756822	39756974	100	+	.	Parent=FBgn0029113.1.mrna1;Target=FBgn0029113.1 1 153 +
Chr1	stalkie_big_nohaplotig	exon	39757036	39757190	100	+	.	Parent=FBgn0029113.1.mrna1;Target=FBgn0029113.1 154 308 +
Chr1	stalkie_big_nohaplotig	exon	39757257	39757544	100	+	.	Parent=FBgn0029113.1.mrna1;Target=FBgn0029113.1 309 596 +
Chr1	stalkie_big_nohaplotig	exon	39757604	39759065	99	+	.	Parent=FBgn0029113.1.mrna1;Target=FBgn0029113.1 597 2058 +
Chr1	stalkie_big_nohaplotig	CDS	39756822	39756974	.	+	0	Parent=FBgn0029113.1.mrna1;Target=FBgn0029113.1 1 153 +
Chr1	stalkie_big_nohaplotig	CDS	39757036	39757190	.	+	0	Parent=FBgn0029113.1.mrna1;Target=FBgn0029113.1 154 308 +
Chr1	stalkie_big_nohaplotig	CDS	39757257	39757544	.	+	1	Parent=FBgn0029113.1.mrna1;Target=FBgn0029113.1 309 596 +
Chr1	stalkie_big_nohaplotig	CDS	39757604	39759065	.	+	1	Parent=FBgn0029113.1.mrna1;Target=FBgn0029113.1 597 2058 +
Chr1	gffcl	locus	39759651	39760144	.	+	.	ID=RLOC_00007339;geneIDs=FBgn0042112.1.path1;transcripts=FBgn0042112.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39759651	39760144	.	+	.	ID=FBgn0042112.1.mrna1;geneID=FBgn0042112.1.path1;Name=FBgn0042112.1;Dir=sensecoverage=100.0;identity=100.0;matches=435;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007339
Chr1	stalkie_big_nohaplotig	exon	39759651	39759683	100	+	.	Parent=FBgn0042112.1.mrna1;Target=FBgn0042112.1 1 33 +
Chr1	stalkie_big_nohaplotig	exon	39759743	39760144	100	+	.	Parent=FBgn0042112.1.mrna1;Target=FBgn0042112.1 34 435 +
Chr1	stalkie_big_nohaplotig	CDS	39759651	39759683	.	+	0	Parent=FBgn0042112.1.mrna1;Target=FBgn0042112.1 1 33 +
Chr1	stalkie_big_nohaplotig	CDS	39759743	39760144	.	+	0	Parent=FBgn0042112.1.mrna1;Target=FBgn0042112.1 34 435 +
Chr1	gffcl	locus	39762348	39764307	.	+	.	ID=RLOC_00007340;geneIDs=FBgn0035838.1.path1;transcripts=FBgn0035838.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39762348	39764307	.	+	.	ID=FBgn0035838.1.mrna1;geneID=FBgn0035838.1.path1;Name=FBgn0035838.1;Dir=sensecoverage=100.0;identity=99.0;matches=1883;mismatches=15;indels=4;unknowns=0;locus=RLOC_00007340
Chr1	stalkie_big_nohaplotig	exon	39762348	39762603	98	+	.	Parent=FBgn0035838.1.mrna1;Target=FBgn0035838.1 1 257 +
Chr1	stalkie_big_nohaplotig	exon	39762666	39764307	99	+	.	Parent=FBgn0035838.1.mrna1;Target=FBgn0035838.1 258 1902 +
Chr1	stalkie_big_nohaplotig	CDS	39762407	39762603	.	+	0	Parent=FBgn0035838.1.mrna1;Target=FBgn0035838.1 61 257 +
Chr1	stalkie_big_nohaplotig	CDS	39762666	39764307	.	+	1	Parent=FBgn0035838.1.mrna1;Target=FBgn0035838.1 258 1902 +
Chr1	gffcl	locus	39764963	39765688	.	-	.	ID=RLOC_00007341;geneIDs=FBgn0035839.1.path1;transcripts=FBgn0035839.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39764963	39765688	.	-	.	ID=FBgn0035839.1.mrna1;geneID=FBgn0035839.1.path1;Name=FBgn0035839.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=721;mismatches=5;indels=0;unknowns=0;Target=FBgn0035839.1 726 1 .;locus=RLOC_00007341
Chr1	stalkie_big_nohaplotig	exon	39764963	39765688	99	-	.	Parent=FBgn0035839.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39764963	39765688	.	-	0	Parent=FBgn0035839.1.mrna1
Chr1	gffcl	locus	39766394	39767191	.	+	.	ID=RLOC_00007342;geneIDs=comp137266_c0_seq1.path1;transcripts=comp137266_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39766394	39767191	.	+	.	ID=comp137266_c0_seq1.mrna1;geneID=comp137266_c0_seq1.path1;Name=comp137266_c0_seq1;Dir=antisensecoverage=99.9;identity=100.0;matches=724;mismatches=0;indels=0;unknowns=0;Target=comp137266_c0_seq1 492 566 .;locus=RLOC_00007342
Chr1	stalkie_big_nohaplotig	exon	39766394	39766445	100	+	.	Parent=comp137266_c0_seq1.mrna1;Target=comp137266_c0_seq1 674 725 -
Chr1	stalkie_big_nohaplotig	exon	39766520	39767191	100	+	.	Parent=comp137266_c0_seq1.mrna1;Target=comp137266_c0_seq1 2 673 -
Chr1	stalkie_big_nohaplotig	CDS	39766627	39766701	.	+	0	Parent=comp137266_c0_seq1.mrna1
Chr1	gffcl	locus	39769167	39782759	.	.	.	ID=RLOC_00007343;geneIDs=FBgn0026252.1.path1,comp52153_c0_seq1.path1,comp369758_c0_seq1.path1;transcripts=FBgn0026252.1.mrna1,comp52153_c0_seq1.mrna1,comp369758_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39769167	39782759	.	-	.	ID=FBgn0026252.1.mrna1;geneID=FBgn0026252.1.path1;Name=FBgn0026252.1;Dir=sensecoverage=100.0;identity=100.0;matches=3159;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007343
Chr1	stalkie_big_nohaplotig	exon	39769167	39769360	100	-	.	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 2966 3159 +
Chr1	stalkie_big_nohaplotig	exon	39769425	39769685	100	-	.	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 2705 2965 +
Chr1	stalkie_big_nohaplotig	exon	39770995	39771197	100	-	.	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 2502 2704 +
Chr1	stalkie_big_nohaplotig	exon	39771268	39771401	100	-	.	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 2368 2501 +
Chr1	stalkie_big_nohaplotig	exon	39771589	39771765	100	-	.	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 2191 2367 +
Chr1	stalkie_big_nohaplotig	exon	39771834	39772057	100	-	.	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 1967 2190 +
Chr1	stalkie_big_nohaplotig	exon	39772137	39772824	100	-	.	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 1279 1966 +
Chr1	stalkie_big_nohaplotig	exon	39775275	39775384	100	-	.	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 1169 1278 +
Chr1	stalkie_big_nohaplotig	exon	39775463	39775608	100	-	.	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 1023 1168 +
Chr1	stalkie_big_nohaplotig	exon	39775677	39775853	100	-	.	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 846 1022 +
Chr1	stalkie_big_nohaplotig	exon	39775919	39776315	100	-	.	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 449 845 +
Chr1	stalkie_big_nohaplotig	exon	39776394	39776494	100	-	.	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 348 448 +
Chr1	stalkie_big_nohaplotig	exon	39776554	39776789	100	-	.	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 112 347 +
Chr1	stalkie_big_nohaplotig	exon	39782649	39782759	100	-	.	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 1 111 +
Chr1	stalkie_big_nohaplotig	CDS	39769167	39769360	.	-	2	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 2966 3159 +
Chr1	stalkie_big_nohaplotig	CDS	39769425	39769685	.	-	2	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 2705 2965 +
Chr1	stalkie_big_nohaplotig	CDS	39770995	39771197	.	-	1	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 2502 2704 +
Chr1	stalkie_big_nohaplotig	CDS	39771268	39771401	.	-	0	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 2368 2501 +
Chr1	stalkie_big_nohaplotig	CDS	39771589	39771765	.	-	0	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 2191 2367 +
Chr1	stalkie_big_nohaplotig	CDS	39771834	39772057	.	-	2	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 1967 2190 +
Chr1	stalkie_big_nohaplotig	CDS	39772137	39772824	.	-	0	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 1279 1966 +
Chr1	stalkie_big_nohaplotig	CDS	39775275	39775384	.	-	2	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 1169 1278 +
Chr1	stalkie_big_nohaplotig	CDS	39775463	39775608	.	-	1	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 1023 1168 +
Chr1	stalkie_big_nohaplotig	CDS	39775677	39775853	.	-	1	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 846 1022 +
Chr1	stalkie_big_nohaplotig	CDS	39775919	39776315	.	-	2	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 449 845 +
Chr1	stalkie_big_nohaplotig	CDS	39776394	39776494	.	-	1	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 348 448 +
Chr1	stalkie_big_nohaplotig	CDS	39776554	39776789	.	-	0	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 112 347 +
Chr1	stalkie_big_nohaplotig	CDS	39782649	39782759	.	-	0	Parent=FBgn0026252.1.mrna1;Target=FBgn0026252.1 1 111 +
Chr1	stalkie_big_nohaplotig	mRNA	39769665	39770154	.	-	.	ID=comp52153_c0_seq1.mrna1;geneID=comp52153_c0_seq1.path1;Name=comp52153_c0_seq1;Dir=indeterminatecoverage=97.5;identity=96.6;matches=490;mismatches=0;indels=17;unknowns=0;Target=comp52153_c0_seq1 520 14 .;CDS_Target=comp52153_c0_seq1 440 234 .;locus=RLOC_00007343
Chr1	stalkie_big_nohaplotig	exon	39769665	39770154	96	-	.	Parent=comp52153_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39769745	39769934	.	-	0	Parent=comp52153_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39772805	39773191	.	+	.	ID=comp369758_c0_seq1.mrna1;geneID=comp369758_c0_seq1.path1;Name=comp369758_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=384;mismatches=3;indels=0;unknowns=0;Target=comp369758_c0_seq1 387 1 .;CDS_Target=comp369758_c0_seq1 386 303 .;locus=RLOC_00007343
Chr1	stalkie_big_nohaplotig	exon	39772805	39773191	99	+	.	Parent=comp369758_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39773107	39773190	.	+	0	Parent=comp369758_c0_seq1.mrna1
Chr1	gffcl	locus	39787101	39792063	.	+	.	ID=RLOC_00007344;geneIDs=FBgn0037083.1.path1;transcripts=FBgn0037083.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39787101	39792063	.	+	.	ID=FBgn0037083.1.mrna1;geneID=FBgn0037083.1.path1;Name=FBgn0037083.1;Dir=sensecoverage=100.0;identity=100.0;matches=1656;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007344
Chr1	stalkie_big_nohaplotig	exon	39787101	39787269	100	+	.	Parent=FBgn0037083.1.mrna1;Target=FBgn0037083.1 1 169 +
Chr1	stalkie_big_nohaplotig	exon	39790402	39790658	100	+	.	Parent=FBgn0037083.1.mrna1;Target=FBgn0037083.1 170 426 +
Chr1	stalkie_big_nohaplotig	exon	39790718	39791732	100	+	.	Parent=FBgn0037083.1.mrna1;Target=FBgn0037083.1 427 1441 +
Chr1	stalkie_big_nohaplotig	exon	39791792	39791875	100	+	.	Parent=FBgn0037083.1.mrna1;Target=FBgn0037083.1 1442 1525 +
Chr1	stalkie_big_nohaplotig	exon	39791933	39792063	100	+	.	Parent=FBgn0037083.1.mrna1;Target=FBgn0037083.1 1526 1656 +
Chr1	stalkie_big_nohaplotig	CDS	39787101	39787269	.	+	0	Parent=FBgn0037083.1.mrna1;Target=FBgn0037083.1 1 169 +
Chr1	stalkie_big_nohaplotig	CDS	39790402	39790658	.	+	2	Parent=FBgn0037083.1.mrna1;Target=FBgn0037083.1 170 426 +
Chr1	stalkie_big_nohaplotig	CDS	39790718	39791732	.	+	0	Parent=FBgn0037083.1.mrna1;Target=FBgn0037083.1 427 1441 +
Chr1	stalkie_big_nohaplotig	CDS	39791792	39791875	.	+	2	Parent=FBgn0037083.1.mrna1;Target=FBgn0037083.1 1442 1525 +
Chr1	stalkie_big_nohaplotig	CDS	39791933	39792063	.	+	2	Parent=FBgn0037083.1.mrna1;Target=FBgn0037083.1 1526 1656 +
Chr1	gffcl	locus	39793956	39804199	.	+	.	ID=RLOC_00007345;geneIDs=FBgn0037027.1.path1,comp158474_c0_seq1.path1;transcripts=comp158474_c0_seq1.mrna1,FBgn0037027.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39793956	39804199	.	+	.	ID=comp158474_c0_seq1.mrna1;geneID=comp158474_c0_seq1.path1;Name=comp158474_c0_seq1;Dir=sensecoverage=96.8;identity=99.5;matches=4959;mismatches=21;indels=2;unknowns=0;locus=RLOC_00007345
Chr1	stalkie_big_nohaplotig	exon	39793956	39795853	99	+	.	Parent=comp158474_c0_seq1.mrna1;Target=comp158474_c0_seq1 1 1896 +
Chr1	stalkie_big_nohaplotig	exon	39795953	39797151	99	+	.	Parent=comp158474_c0_seq1.mrna1;Target=comp158474_c0_seq1 1897 3095 +
Chr1	stalkie_big_nohaplotig	exon	39797206	39798569	100	+	.	Parent=comp158474_c0_seq1.mrna1;Target=comp158474_c0_seq1 3096 4459 +
Chr1	stalkie_big_nohaplotig	exon	39798664	39798874	100	+	.	Parent=comp158474_c0_seq1.mrna1;Target=comp158474_c0_seq1 4460 4670 +
Chr1	stalkie_big_nohaplotig	exon	39798934	39799077	100	+	.	Parent=comp158474_c0_seq1.mrna1;Target=comp158474_c0_seq1 4671 4814 +
Chr1	stalkie_big_nohaplotig	exon	39804034	39804199	88	+	.	Parent=comp158474_c0_seq1.mrna1;Target=comp158474_c0_seq1 4815 4980 +
Chr1	stalkie_big_nohaplotig	CDS	39794596	39795853	.	+	0	Parent=comp158474_c0_seq1.mrna1;Target=comp158474_c0_seq1 639 1896 +
Chr1	stalkie_big_nohaplotig	CDS	39795953	39797151	.	+	2	Parent=comp158474_c0_seq1.mrna1;Target=comp158474_c0_seq1 1897 3095 +
Chr1	stalkie_big_nohaplotig	CDS	39797206	39798315	.	+	0	Parent=comp158474_c0_seq1.mrna1;Target=comp158474_c0_seq1 3096 4205 +
Chr1	stalkie_big_nohaplotig	mRNA	39794560	39804183	.	+	.	ID=FBgn0037027.1.mrna1;geneID=FBgn0037027.1.path1;Name=FBgn0037027.1;Dir=sensecoverage=100.0;identity=99.6;matches=4259;mismatches=19;indels=0;unknowns=0;locus=RLOC_00007345
Chr1	stalkie_big_nohaplotig	exon	39794560	39795853	100	+	.	Parent=FBgn0037027.1.mrna1;Target=FBgn0037027.1 1 1294 +
Chr1	stalkie_big_nohaplotig	exon	39795953	39797151	99	+	.	Parent=FBgn0037027.1.mrna1;Target=FBgn0037027.1 1295 2493 +
Chr1	stalkie_big_nohaplotig	exon	39797206	39798309	100	+	.	Parent=FBgn0037027.1.mrna1;Target=FBgn0037027.1 2494 3597 +
Chr1	stalkie_big_nohaplotig	exon	39798394	39798569	100	+	.	Parent=FBgn0037027.1.mrna1;Target=FBgn0037027.1 3598 3773 +
Chr1	stalkie_big_nohaplotig	exon	39798664	39798874	100	+	.	Parent=FBgn0037027.1.mrna1;Target=FBgn0037027.1 3774 3984 +
Chr1	stalkie_big_nohaplotig	exon	39798934	39799077	100	+	.	Parent=FBgn0037027.1.mrna1;Target=FBgn0037027.1 3985 4128 +
Chr1	stalkie_big_nohaplotig	exon	39804034	39804183	88	+	.	Parent=FBgn0037027.1.mrna1;Target=FBgn0037027.1 4129 4278 +
Chr1	stalkie_big_nohaplotig	CDS	39794560	39795853	.	+	0	Parent=FBgn0037027.1.mrna1;Target=FBgn0037027.1 1 1294 +
Chr1	stalkie_big_nohaplotig	CDS	39795953	39797151	.	+	2	Parent=FBgn0037027.1.mrna1;Target=FBgn0037027.1 1295 2493 +
Chr1	stalkie_big_nohaplotig	CDS	39797206	39798309	.	+	0	Parent=FBgn0037027.1.mrna1;Target=FBgn0037027.1 2494 3597 +
Chr1	stalkie_big_nohaplotig	CDS	39798394	39798569	.	+	0	Parent=FBgn0037027.1.mrna1;Target=FBgn0037027.1 3598 3773 +
Chr1	stalkie_big_nohaplotig	CDS	39798664	39798874	.	+	1	Parent=FBgn0037027.1.mrna1;Target=FBgn0037027.1 3774 3984 +
Chr1	stalkie_big_nohaplotig	CDS	39798934	39799077	.	+	0	Parent=FBgn0037027.1.mrna1;Target=FBgn0037027.1 3985 4128 +
Chr1	stalkie_big_nohaplotig	CDS	39804034	39804183	.	+	0	Parent=FBgn0037027.1.mrna1;Target=FBgn0037027.1 4129 4278 +
Chr1	gffcl	locus	39809638	39810359	.	-	.	ID=RLOC_00007346;geneIDs=comp152371_c0_seq1.path1;transcripts=comp152371_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39809638	39810359	.	-	.	ID=comp152371_c0_seq1.mrna1;geneID=comp152371_c0_seq1.path1;Name=comp152371_c0_seq1;Dir=indeterminatecoverage=93.4;identity=99.9;matches=722;mismatches=0;indels=1;unknowns=0;Target=comp152371_c0_seq1 723 1 .;CDS_Target=comp152371_c0_seq1 639 538 .;locus=RLOC_00007346
Chr1	stalkie_big_nohaplotig	exon	39809638	39810359	99	-	.	Parent=comp152371_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39809722	39809823	.	-	0	Parent=comp152371_c0_seq1.mrna1
Chr1	gffcl	locus	39811393	39813078	.	-	.	ID=RLOC_00007347;geneIDs=FBgn0036671.1.path1;transcripts=FBgn0036671.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39811393	39813078	.	-	.	ID=FBgn0036671.1.mrna1;geneID=FBgn0036671.1.path1;Name=FBgn0036671.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1685;mismatches=1;indels=0;unknowns=0;Target=FBgn0036671.1 1686 1 .;locus=RLOC_00007347
Chr1	stalkie_big_nohaplotig	exon	39811393	39813078	99	-	.	Parent=FBgn0036671.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39811393	39813078	.	-	0	Parent=FBgn0036671.1.mrna1
Chr1	gffcl	locus	39815062	39816075	.	+	.	ID=RLOC_00007348;geneIDs=ORF1715.path1;transcripts=ORF1715.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39815062	39816075	.	+	.	ID=ORF1715.mrna1;geneID=ORF1715.path1;Name=ORF1715;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1014;mismatches=0;indels=0;unknowns=0;Target=ORF1715 1014 1 .;locus=RLOC_00007348
Chr1	stalkie_big_nohaplotig	exon	39815062	39816075	100	+	.	Parent=ORF1715.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39815062	39816075	.	+	0	Parent=ORF1715.mrna1
Chr1	gffcl	locus	39816767	41701329	.	+	.	ID=RLOC_00007349;geneIDs=comp116841_c0_seq1.path1;transcripts=comp116841_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39816767	41701329	.	+	.	ID=comp116841_c0_seq1.mrna1;geneID=comp116841_c0_seq1.path1;Name=comp116841_c0_seq1;Dir=antisensecoverage=89.8;identity=96.7;matches=650;mismatches=6;indels=16;unknowns=0;Target=comp116841_c0_seq1 289 327 .;locus=RLOC_00007349
Chr1	stalkie_big_nohaplotig	exon	39816767	39816769	100	+	.	Parent=comp116841_c0_seq1.mrna1;Target=comp116841_c0_seq1 658 660 -
Chr1	stalkie_big_nohaplotig	exon	39824782	39824786	100	+	.	Parent=comp116841_c0_seq1.mrna1;Target=comp116841_c0_seq1 653 657 -
Chr1	stalkie_big_nohaplotig	exon	39826444	39826448	100	+	.	Parent=comp116841_c0_seq1.mrna1;Target=comp116841_c0_seq1 648 652 -
Chr1	stalkie_big_nohaplotig	exon	39827076	39827080	100	+	.	Parent=comp116841_c0_seq1.mrna1;Target=comp116841_c0_seq1 643 647 -
Chr1	stalkie_big_nohaplotig	exon	39831382	39831386	100	+	.	Parent=comp116841_c0_seq1.mrna1;Target=comp116841_c0_seq1 638 642 -
Chr1	stalkie_big_nohaplotig	exon	39838354	39838375	54	+	.	Parent=comp116841_c0_seq1.mrna1;Target=comp116841_c0_seq1 625 637 -
Chr1	stalkie_big_nohaplotig	exon	39843855	39843856	100	+	.	Parent=comp116841_c0_seq1.mrna1;Target=comp116841_c0_seq1 623 624 -
Chr1	stalkie_big_nohaplotig	exon	41700334	41700930	98	+	.	Parent=comp116841_c0_seq1.mrna1;Target=comp116841_c0_seq1 25 622 -
Chr1	stalkie_big_nohaplotig	exon	41701306	41701329	100	+	.	Parent=comp116841_c0_seq1.mrna1;Target=comp116841_c0_seq1 1 24 -
Chr1	stalkie_big_nohaplotig	CDS	41700629	41700665	.	+	0	Parent=comp116841_c0_seq1.mrna1
Chr1	gffcl	locus	39822478	39822871	.	-	.	ID=RLOC_00007350;geneIDs=FBgn0011289.1.path1;transcripts=FBgn0011289.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39822478	39822871	.	-	.	ID=FBgn0011289.1.mrna1;geneID=FBgn0011289.1.path1;Name=FBgn0011289.1;Dir=indeterminatecoverage=35.8;identity=99.5;matches=392;mismatches=2;indels=0;unknowns=0;Target=FBgn0011289.1 394 1 .;locus=RLOC_00007350
Chr1	stalkie_big_nohaplotig	exon	39822478	39822871	99	-	.	Parent=FBgn0011289.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39822478	39822871	.	-	0	Parent=FBgn0011289.1.mrna1
Chr1	gffcl	locus	39847842	39848811	.	-	.	ID=RLOC_00007351;geneIDs=comp155553_c0_seq1.path1;transcripts=comp155553_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39847842	39848811	.	-	.	ID=comp155553_c0_seq1.mrna1;geneID=comp155553_c0_seq1.path1;Name=comp155553_c0_seq1;Dir=indeterminatecoverage=96.0;identity=100.0;matches=970;mismatches=0;indels=0;unknowns=0;Target=comp155553_c0_seq1 989 20 .;CDS_Target=comp155553_c0_seq1 639 163 .;locus=RLOC_00007351
Chr1	stalkie_big_nohaplotig	exon	39847842	39848811	100	-	.	Parent=comp155553_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39848192	39848668	.	-	0	Parent=comp155553_c0_seq1.mrna1
Chr1	gffcl	locus	39860120	39861503	.	+	.	ID=RLOC_00007352;geneIDs=comp156398_c0_seq1.path1;transcripts=comp156398_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39860120	39861503	.	+	.	ID=comp156398_c0_seq1.mrna1;geneID=comp156398_c0_seq1.path1;Name=comp156398_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.6;matches=1378;mismatches=6;indels=0;unknowns=0;Target=comp156398_c0_seq1 1401 18 .;CDS_Target=comp156398_c0_seq1 824 702 .;locus=RLOC_00007352
Chr1	stalkie_big_nohaplotig	exon	39860120	39861503	99	+	.	Parent=comp156398_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	39860804	39860926	.	+	0	Parent=comp156398_c0_seq1.mrna1
Chr1	gffcl	locus	39861992	39862042	.	-	.	ID=RLOC_00007353;geneIDs=comp152371_c0_seq1.path2;transcripts=comp152371_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	39861992	39862042	.	-	.	ID=comp152371_c0_seq1.mrna2;geneID=comp152371_c0_seq1.path2;Name=comp152371_c0_seq1;Dir=indeterminatecoverage=6.6;identity=100.0;matches=51;mismatches=0;indels=0;unknowns=0;Target=comp152371_c0_seq1 774 724 .;locus=RLOC_00007353
Chr1	stalkie_big_nohaplotig	exon	39861992	39862042	100	-	.	Parent=comp152371_c0_seq1.mrna2
Chr1	gffcl	locus	39890418	39917424	.	-	.	ID=RLOC_00007354;geneIDs=FBgn0262139.1.path1;transcripts=FBgn0262139.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	39890418	39917424	.	-	.	ID=FBgn0262139.1.mrna1;geneID=FBgn0262139.1.path1;Name=FBgn0262139.1;Dir=sensecoverage=100.0;identity=99.3;matches=2106;mismatches=14;indels=0;unknowns=0;locus=RLOC_00007354
Chr1	stalkie_big_nohaplotig	exon	39890418	39891101	98	-	.	Parent=FBgn0262139.1.mrna1;Target=FBgn0262139.1 1437 2120 +
Chr1	stalkie_big_nohaplotig	exon	39891169	39891316	100	-	.	Parent=FBgn0262139.1.mrna1;Target=FBgn0262139.1 1289 1436 +
Chr1	stalkie_big_nohaplotig	exon	39891378	39891484	100	-	.	Parent=FBgn0262139.1.mrna1;Target=FBgn0262139.1 1182 1288 +
Chr1	stalkie_big_nohaplotig	exon	39892499	39892692	98	-	.	Parent=FBgn0262139.1.mrna1;Target=FBgn0262139.1 988 1181 +
Chr1	stalkie_big_nohaplotig	exon	39895916	39896037	100	-	.	Parent=FBgn0262139.1.mrna1;Target=FBgn0262139.1 866 987 +
Chr1	stalkie_big_nohaplotig	exon	39897263	39897542	99	-	.	Parent=FBgn0262139.1.mrna1;Target=FBgn0262139.1 586 865 +
Chr1	stalkie_big_nohaplotig	exon	39897673	39897740	100	-	.	Parent=FBgn0262139.1.mrna1;Target=FBgn0262139.1 518 585 +
Chr1	stalkie_big_nohaplotig	exon	39904568	39904803	100	-	.	Parent=FBgn0262139.1.mrna1;Target=FBgn0262139.1 282 517 +
Chr1	stalkie_big_nohaplotig	exon	39917144	39917424	100	-	.	Parent=FBgn0262139.1.mrna1;Target=FBgn0262139.1 1 281 +
Chr1	stalkie_big_nohaplotig	CDS	39890420	39891101	.	-	1	Parent=FBgn0262139.1.mrna1;Target=FBgn0262139.1 1437 2118 +
Chr1	stalkie_big_nohaplotig	CDS	39891169	39891316	.	-	2	Parent=FBgn0262139.1.mrna1;Target=FBgn0262139.1 1289 1436 +
Chr1	stalkie_big_nohaplotig	CDS	39891378	39891484	.	-	1	Parent=FBgn0262139.1.mrna1;Target=FBgn0262139.1 1182 1288 +
Chr1	stalkie_big_nohaplotig	CDS	39892499	39892692	.	-	0	Parent=FBgn0262139.1.mrna1;Target=FBgn0262139.1 988 1181 +
Chr1	stalkie_big_nohaplotig	CDS	39895916	39896037	.	-	2	Parent=FBgn0262139.1.mrna1;Target=FBgn0262139.1 866 987 +
Chr1	stalkie_big_nohaplotig	CDS	39897263	39897542	.	-	0	Parent=FBgn0262139.1.mrna1;Target=FBgn0262139.1 586 865 +
Chr1	stalkie_big_nohaplotig	CDS	39897673	39897740	.	-	2	Parent=FBgn0262139.1.mrna1;Target=FBgn0262139.1 518 585 +
Chr1	stalkie_big_nohaplotig	CDS	39904568	39904803	.	-	1	Parent=FBgn0262139.1.mrna1;Target=FBgn0262139.1 282 517 +
Chr1	stalkie_big_nohaplotig	CDS	39917144	39917424	.	-	0	Parent=FBgn0262139.1.mrna1;Target=FBgn0262139.1 1 281 +
Chr1	gffcl	locus	40026255	40026882	.	-	.	ID=RLOC_00007355;geneIDs=comp147933_c0_seq1.path1;transcripts=comp147933_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40026255	40026882	.	-	.	ID=comp147933_c0_seq1.mrna1;geneID=comp147933_c0_seq1.path1;Name=comp147933_c0_seq1;Dir=indeterminatecoverage=94.4;identity=99.7;matches=626;mismatches=2;indels=0;unknowns=0;Target=comp147933_c0_seq1 664 37 .;CDS_Target=comp147933_c0_seq1 662 465 .;locus=RLOC_00007355
Chr1	stalkie_big_nohaplotig	exon	40026255	40026882	99	-	.	Parent=comp147933_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	40026257	40026454	.	-	0	Parent=comp147933_c0_seq1.mrna1
Chr1	gffcl	locus	40050048	40050706	.	-	.	ID=RLOC_00007356;geneIDs=comp154761_c0_seq1.path1;transcripts=comp154761_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40050048	40050706	.	-	.	ID=comp154761_c0_seq1.mrna1;geneID=comp154761_c0_seq1.path1;Name=comp154761_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.7;matches=658;mismatches=1;indels=1;unknowns=0;Target=comp154761_c0_seq1 660 1 .;CDS_Target=comp154761_c0_seq1 340 95 .;locus=RLOC_00007356
Chr1	stalkie_big_nohaplotig	exon	40050048	40050706	99	-	.	Parent=comp154761_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	40050367	40050612	.	-	0	Parent=comp154761_c0_seq1.mrna1
Chr1	gffcl	locus	40353395	40519165	.	-	.	ID=RLOC_00007357;geneIDs=FBgn0036134.1.path1;transcripts=FBgn0036134.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40353395	40519165	.	-	.	ID=FBgn0036134.1.mrna1;geneID=FBgn0036134.1.path1;Name=FBgn0036134.1;Dir=sensecoverage=80.7;identity=97.7;matches=1998;mismatches=28;indels=19;unknowns=0;locus=RLOC_00007357
Chr1	stalkie_big_nohaplotig	exon	40353395	40353398	100	-	.	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 2033 2036 +
Chr1	stalkie_big_nohaplotig	exon	40362614	40362623	100	-	.	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 2023 2032 +
Chr1	stalkie_big_nohaplotig	exon	40369143	40369153	57	-	.	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 2004 2022 +
Chr1	stalkie_big_nohaplotig	exon	40372995	40373003	100	-	.	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1995 2003 +
Chr1	stalkie_big_nohaplotig	exon	40380773	40380776	100	-	.	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1991 1994 +
Chr1	stalkie_big_nohaplotig	exon	40386996	40387065	51	-	.	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1928 1990 +
Chr1	stalkie_big_nohaplotig	exon	40399042	40399048	100	-	.	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1921 1927 +
Chr1	stalkie_big_nohaplotig	exon	40410286	40410288	100	-	.	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1918 1920 +
Chr1	stalkie_big_nohaplotig	exon	40410540	40410545	100	-	.	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1912 1917 +
Chr1	stalkie_big_nohaplotig	exon	40511491	40511680	99	-	.	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1722 1911 +
Chr1	stalkie_big_nohaplotig	exon	40511751	40511814	100	-	.	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1658 1721 +
Chr1	stalkie_big_nohaplotig	exon	40511897	40511992	100	-	.	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1562 1657 +
Chr1	stalkie_big_nohaplotig	exon	40512054	40512238	100	-	.	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1377 1561 +
Chr1	stalkie_big_nohaplotig	exon	40513292	40513512	100	-	.	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1156 1376 +
Chr1	stalkie_big_nohaplotig	exon	40513573	40513673	100	-	.	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1055 1155 +
Chr1	stalkie_big_nohaplotig	exon	40518041	40518447	100	-	.	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 648 1054 +
Chr1	stalkie_big_nohaplotig	exon	40518519	40519165	99	-	.	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1 647 +
Chr1	stalkie_big_nohaplotig	CDS	40353395	40353398	.	-	0	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 2033 2036 +
Chr1	stalkie_big_nohaplotig	CDS	40362614	40362623	.	-	1	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 2023 2032 +
Chr1	stalkie_big_nohaplotig	CDS	40369143	40369153	.	-	0	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 2004 2022 +
Chr1	stalkie_big_nohaplotig	CDS	40372995	40373003	.	-	0	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1995 2003 +
Chr1	stalkie_big_nohaplotig	CDS	40380773	40380776	.	-	1	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1991 1994 +
Chr1	stalkie_big_nohaplotig	CDS	40386996	40387065	.	-	2	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1928 1990 +
Chr1	stalkie_big_nohaplotig	CDS	40399042	40399048	.	-	0	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1921 1927 +
Chr1	stalkie_big_nohaplotig	CDS	40410286	40410288	.	-	0	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1918 1920 +
Chr1	stalkie_big_nohaplotig	CDS	40410540	40410545	.	-	0	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1912 1917 +
Chr1	stalkie_big_nohaplotig	CDS	40511491	40511680	.	-	1	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1722 1911 +
Chr1	stalkie_big_nohaplotig	CDS	40511751	40511814	.	-	2	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1658 1721 +
Chr1	stalkie_big_nohaplotig	CDS	40511897	40511992	.	-	2	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1562 1657 +
Chr1	stalkie_big_nohaplotig	CDS	40512054	40512238	.	-	1	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1377 1561 +
Chr1	stalkie_big_nohaplotig	CDS	40513292	40513512	.	-	0	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1156 1376 +
Chr1	stalkie_big_nohaplotig	CDS	40513573	40513673	.	-	2	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1055 1155 +
Chr1	stalkie_big_nohaplotig	CDS	40518041	40518447	.	-	1	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 648 1054 +
Chr1	stalkie_big_nohaplotig	CDS	40518519	40519165	.	-	0	Parent=FBgn0036134.1.mrna1;Target=FBgn0036134.1 1 647 +
Chr1	gffcl	locus	40383877	40434476	.	-	.	ID=RLOC_00007358;geneIDs=FBgn0001316.path1,comp158969_c0_seq1.path1;transcripts=FBgn0001316.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40383877	40434371	.	-	.	ID=FBgn0001316.mrna1;geneID=FBgn0001316.path1;Name=FBgn0001316;Dir=sensecoverage=99.8;identity=98.9;matches=1186;mismatches=12;indels=1;unknowns=0;locus=RLOC_00007358
Chr1	stalkie_big_nohaplotig	exon	40383877	40383918	88	-	.	Parent=FBgn0001316.mrna1;Target=FBgn0001316 1180 1221 +
Chr1	stalkie_big_nohaplotig	exon	40386361	40386366	100	-	.	Parent=FBgn0001316.mrna1;Target=FBgn0001316 1174 1179 +
Chr1	stalkie_big_nohaplotig	exon	40388665	40388669	100	-	.	Parent=FBgn0001316.mrna1;Target=FBgn0001316 1169 1173 +
Chr1	stalkie_big_nohaplotig	exon	40403214	40403226	92	-	.	Parent=FBgn0001316.mrna1;Target=FBgn0001316 1133 1144 +
Chr1	stalkie_big_nohaplotig	exon	40408211	40408228	77	-	.	Parent=FBgn0001316.mrna1;Target=FBgn0001316 1115 1132 +
Chr1	stalkie_big_nohaplotig	exon	40408501	40408508	100	-	.	Parent=FBgn0001316.mrna1;Target=FBgn0001316 1107 1114 +
Chr1	stalkie_big_nohaplotig	exon	40421420	40421583	100	-	.	Parent=FBgn0001316.mrna1;Target=FBgn0001316 943 1106 +
Chr1	stalkie_big_nohaplotig	exon	40421662	40421804	100	-	.	Parent=FBgn0001316.mrna1;Target=FBgn0001316 800 942 +
Chr1	stalkie_big_nohaplotig	exon	40424281	40424416	99	-	.	Parent=FBgn0001316.mrna1;Target=FBgn0001316 664 799 +
Chr1	stalkie_big_nohaplotig	exon	40433709	40434371	99	-	.	Parent=FBgn0001316.mrna1;Target=FBgn0001316 1 663 +
Chr1	stalkie_big_nohaplotig	CDS	40383877	40383918	.	-	2	Parent=FBgn0001316.mrna1;Target=FBgn0001316 1180 1221 +
Chr1	stalkie_big_nohaplotig	CDS	40386361	40386366	.	-	2	Parent=FBgn0001316.mrna1;Target=FBgn0001316 1174 1179 +
Chr1	stalkie_big_nohaplotig	CDS	40388665	40388669	.	-	1	Parent=FBgn0001316.mrna1;Target=FBgn0001316 1169 1173 +
Chr1	stalkie_big_nohaplotig	CDS	40403214	40403226	.	-	2	Parent=FBgn0001316.mrna1;Target=FBgn0001316 1133 1144 +
Chr1	stalkie_big_nohaplotig	CDS	40408211	40408228	.	-	2	Parent=FBgn0001316.mrna1;Target=FBgn0001316 1115 1132 +
Chr1	stalkie_big_nohaplotig	CDS	40408501	40408508	.	-	1	Parent=FBgn0001316.mrna1;Target=FBgn0001316 1107 1114 +
Chr1	stalkie_big_nohaplotig	CDS	40421420	40421583	.	-	0	Parent=FBgn0001316.mrna1;Target=FBgn0001316 943 1106 +
Chr1	stalkie_big_nohaplotig	CDS	40421662	40421804	.	-	2	Parent=FBgn0001316.mrna1;Target=FBgn0001316 800 942 +
Chr1	stalkie_big_nohaplotig	CDS	40424281	40424416	.	-	0	Parent=FBgn0001316.mrna1;Target=FBgn0001316 664 799 +
Chr1	stalkie_big_nohaplotig	CDS	40433709	40434371	.	-	0	Parent=FBgn0001316.mrna1;Target=FBgn0001316 1 663 +
Chr1	gffcl	locus	40399891	40463941	.	+	.	ID=RLOC_00007359;geneIDs=comp150427_c0_seq1.path1;transcripts=comp150427_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40399891	40463941	.	+	.	ID=comp150427_c0_seq1.mrna1;geneID=comp150427_c0_seq1.path1;Name=comp150427_c0_seq1;Dir=indeterminatecoverage=74.0;identity=97.5;matches=550;mismatches=6;indels=8;unknowns=0;locus=RLOC_00007359
Chr1	stalkie_big_nohaplotig	exon	40399891	40399897	100	+	.	Parent=comp150427_c0_seq1.mrna1;Target=comp150427_c0_seq1 197 191 .
Chr1	stalkie_big_nohaplotig	exon	40402190	40402191	100	+	.	Parent=comp150427_c0_seq1.mrna1;Target=comp150427_c0_seq1 199 198 .
Chr1	stalkie_big_nohaplotig	exon	40402310	40402319	100	+	.	Parent=comp150427_c0_seq1.mrna1;Target=comp150427_c0_seq1 209 200 .
Chr1	stalkie_big_nohaplotig	exon	40406534	40406537	100	+	.	Parent=comp150427_c0_seq1.mrna1;Target=comp150427_c0_seq1 213 210 .
Chr1	stalkie_big_nohaplotig	exon	40419309	40419312	100	+	.	Parent=comp150427_c0_seq1.mrna1;Target=comp150427_c0_seq1 217 214 .
Chr1	stalkie_big_nohaplotig	exon	40426900	40426903	100	+	.	Parent=comp150427_c0_seq1.mrna1;Target=comp150427_c0_seq1 221 218 .
Chr1	stalkie_big_nohaplotig	exon	40433305	40433308	100	+	.	Parent=comp150427_c0_seq1.mrna1;Target=comp150427_c0_seq1 225 222 .
Chr1	stalkie_big_nohaplotig	exon	40456402	40456404	100	+	.	Parent=comp150427_c0_seq1.mrna1;Target=comp150427_c0_seq1 228 226 .
Chr1	stalkie_big_nohaplotig	exon	40460443	40460450	100	+	.	Parent=comp150427_c0_seq1.mrna1;Target=comp150427_c0_seq1 236 229 .
Chr1	stalkie_big_nohaplotig	exon	40461794	40461796	100	+	.	Parent=comp150427_c0_seq1.mrna1;Target=comp150427_c0_seq1 239 237 .
Chr1	stalkie_big_nohaplotig	exon	40463435	40463941	97	+	.	Parent=comp150427_c0_seq1.mrna1;Target=comp150427_c0_seq1 754 240 .
Chr1	stalkie_big_nohaplotig	CDS	40399893	40399897	.	+	0	Parent=comp150427_c0_seq1.mrna1;Target=comp150427_c0_seq1 197 193 .
Chr1	stalkie_big_nohaplotig	CDS	40402190	40402191	.	+	1	Parent=comp150427_c0_seq1.mrna1;Target=comp150427_c0_seq1 199 198 .
Chr1	stalkie_big_nohaplotig	CDS	40402310	40402319	.	+	2	Parent=comp150427_c0_seq1.mrna1;Target=comp150427_c0_seq1 209 200 .
Chr1	stalkie_big_nohaplotig	CDS	40406534	40406537	.	+	1	Parent=comp150427_c0_seq1.mrna1;Target=comp150427_c0_seq1 213 210 .
Chr1	stalkie_big_nohaplotig	CDS	40419309	40419312	.	+	0	Parent=comp150427_c0_seq1.mrna1;Target=comp150427_c0_seq1 217 214 .
Chr1	stalkie_big_nohaplotig	CDS	40426900	40426903	.	+	2	Parent=comp150427_c0_seq1.mrna1;Target=comp150427_c0_seq1 221 218 .
Chr1	stalkie_big_nohaplotig	CDS	40433305	40433308	.	+	1	Parent=comp150427_c0_seq1.mrna1;Target=comp150427_c0_seq1 225 222 .
Chr1	stalkie_big_nohaplotig	CDS	40456402	40456404	.	+	0	Parent=comp150427_c0_seq1.mrna1;Target=comp150427_c0_seq1 228 226 .
Chr1	stalkie_big_nohaplotig	CDS	40460443	40460450	.	+	0	Parent=comp150427_c0_seq1.mrna1;Target=comp150427_c0_seq1 236 229 .
Chr1	stalkie_big_nohaplotig	CDS	40461794	40461796	.	+	1	Parent=comp150427_c0_seq1.mrna1;Target=comp150427_c0_seq1 239 237 .
Chr1	stalkie_big_nohaplotig	CDS	40463435	40463465	.	+	1	Parent=comp150427_c0_seq1.mrna1;Target=comp150427_c0_seq1 270 240 .
Chr1	gffcl	locus	40429528	40430952	.	+	.	ID=RLOC_00007360;geneIDs=comp154175_c0_seq1.path1;transcripts=comp154175_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40429528	40430952	.	+	.	ID=comp154175_c0_seq1.mrna1;geneID=comp154175_c0_seq1.path1;Name=comp154175_c0_seq1;Dir=indeterminatecoverage=99.9;identity=94.5;matches=904;mismatches=49;indels=4;unknowns=0;Target=comp154175_c0_seq1 589 401 .;locus=RLOC_00007360
Chr1	stalkie_big_nohaplotig	exon	40429528	40429879	93	+	.	Parent=comp154175_c0_seq1.mrna1;Target=comp154175_c0_seq1 349 1 .
Chr1	stalkie_big_nohaplotig	exon	40430323	40430628	94	+	.	Parent=comp154175_c0_seq1.mrna1;Target=comp154175_c0_seq1 654 350 .
Chr1	stalkie_big_nohaplotig	exon	40430654	40430952	96	+	.	Parent=comp154175_c0_seq1.mrna1;Target=comp154175_c0_seq1 965 667 .
Chr1	stalkie_big_nohaplotig	CDS	40430375	40430563	.	+	0	Parent=comp154175_c0_seq1.mrna1
Chr1	gffcl	locus	40458969	40459575	.	-	.	ID=RLOC_00007362;geneIDs=comp299213_c0_seq1.path1;transcripts=comp299213_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40458969	40459575	.	-	.	ID=comp299213_c0_seq1.mrna1;geneID=comp299213_c0_seq1.path1;Name=comp299213_c0_seq1;Dir=indeterminatecoverage=100.0;identity=89.4;matches=579;mismatches=28;indels=41;unknowns=0;Target=comp299213_c0_seq1 648 1 .;CDS_Target=comp299213_c0_seq1 109 104 .;locus=RLOC_00007362
Chr1	stalkie_big_nohaplotig	exon	40458969	40459575	89	-	.	Parent=comp299213_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	40459467	40459472	.	-	0	Parent=comp299213_c0_seq1.mrna1
Chr1	gffcl	locus	40465720	40474687	.	-	.	ID=RLOC_00007363;geneIDs=comp157928_c0_seq1.path2;transcripts=comp157928_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	40465720	40474687	.	-	.	ID=comp157928_c0_seq1.mrna2;geneID=comp157928_c0_seq1.path2;Name=comp157928_c0_seq1;Dir=antisensecoverage=99.1;identity=98.1;matches=1681;mismatches=11;indels=21;unknowns=0;Target=comp157928_c0_seq1 1148 1291 .;locus=RLOC_00007363
Chr1	stalkie_big_nohaplotig	exon	40465720	40466777	97	-	.	Parent=comp157928_c0_seq1.mrna2;Target=comp157928_c0_seq1 16 1055 -
Chr1	stalkie_big_nohaplotig	exon	40473966	40473987	100	-	.	Parent=comp157928_c0_seq1.mrna2;Target=comp157928_c0_seq1 1056 1077 -
Chr1	stalkie_big_nohaplotig	exon	40474057	40474687	98	-	.	Parent=comp157928_c0_seq1.mrna2;Target=comp157928_c0_seq1 1078 1709 -
Chr1	stalkie_big_nohaplotig	CDS	40474127	40474269	.	-	0	Parent=comp157928_c0_seq1.mrna2
Chr1	gffcl	locus	40469571	40473307	.	+	.	ID=RLOC_00007364;geneIDs=FBgn0020277.1.path1;transcripts=FBgn0020277.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40469571	40473307	.	+	.	ID=FBgn0020277.1.mrna1;geneID=FBgn0020277.1.path1;Name=FBgn0020277.1;Dir=sensecoverage=100.0;identity=99.8;matches=446;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007364
Chr1	stalkie_big_nohaplotig	exon	40469571	40469648	100	+	.	Parent=FBgn0020277.1.mrna1;Target=FBgn0020277.1 1 78 +
Chr1	stalkie_big_nohaplotig	exon	40472665	40472796	100	+	.	Parent=FBgn0020277.1.mrna1;Target=FBgn0020277.1 79 210 +
Chr1	stalkie_big_nohaplotig	exon	40472911	40472946	100	+	.	Parent=FBgn0020277.1.mrna1;Target=FBgn0020277.1 211 246 +
Chr1	stalkie_big_nohaplotig	exon	40473026	40473140	100	+	.	Parent=FBgn0020277.1.mrna1;Target=FBgn0020277.1 247 361 +
Chr1	stalkie_big_nohaplotig	exon	40473222	40473307	98	+	.	Parent=FBgn0020277.1.mrna1;Target=FBgn0020277.1 362 447 +
Chr1	stalkie_big_nohaplotig	CDS	40469571	40469648	.	+	0	Parent=FBgn0020277.1.mrna1;Target=FBgn0020277.1 1 78 +
Chr1	stalkie_big_nohaplotig	CDS	40472665	40472796	.	+	0	Parent=FBgn0020277.1.mrna1;Target=FBgn0020277.1 79 210 +
Chr1	stalkie_big_nohaplotig	CDS	40472911	40472946	.	+	0	Parent=FBgn0020277.1.mrna1;Target=FBgn0020277.1 211 246 +
Chr1	stalkie_big_nohaplotig	CDS	40473026	40473140	.	+	0	Parent=FBgn0020277.1.mrna1;Target=FBgn0020277.1 247 361 +
Chr1	stalkie_big_nohaplotig	CDS	40473222	40473307	.	+	2	Parent=FBgn0020277.1.mrna1;Target=FBgn0020277.1 362 447 +
Chr1	gffcl	locus	40478312	40480453	.	-	.	ID=RLOC_00007365;geneIDs=FBgn0010417.1.path1;transcripts=FBgn0010417.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40478312	40480453	.	-	.	ID=FBgn0010417.1.mrna1;geneID=FBgn0010417.1.path1;Name=FBgn0010417.1;Dir=sensecoverage=100.0;identity=99.8;matches=1829;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007365
Chr1	stalkie_big_nohaplotig	exon	40478312	40478392	100	-	.	Parent=FBgn0010417.1.mrna1;Target=FBgn0010417.1 1753 1833 +
Chr1	stalkie_big_nohaplotig	exon	40478459	40478705	100	-	.	Parent=FBgn0010417.1.mrna1;Target=FBgn0010417.1 1506 1752 +
Chr1	stalkie_big_nohaplotig	exon	40478773	40478955	100	-	.	Parent=FBgn0010417.1.mrna1;Target=FBgn0010417.1 1323 1505 +
Chr1	stalkie_big_nohaplotig	exon	40479013	40479288	100	-	.	Parent=FBgn0010417.1.mrna1;Target=FBgn0010417.1 1047 1322 +
Chr1	stalkie_big_nohaplotig	exon	40479347	40479516	98	-	.	Parent=FBgn0010417.1.mrna1;Target=FBgn0010417.1 877 1046 +
Chr1	stalkie_big_nohaplotig	exon	40479578	40480453	99	-	.	Parent=FBgn0010417.1.mrna1;Target=FBgn0010417.1 1 876 +
Chr1	stalkie_big_nohaplotig	CDS	40478312	40478392	.	-	0	Parent=FBgn0010417.1.mrna1;Target=FBgn0010417.1 1753 1833 +
Chr1	stalkie_big_nohaplotig	CDS	40478459	40478705	.	-	1	Parent=FBgn0010417.1.mrna1;Target=FBgn0010417.1 1506 1752 +
Chr1	stalkie_big_nohaplotig	CDS	40478773	40478955	.	-	1	Parent=FBgn0010417.1.mrna1;Target=FBgn0010417.1 1323 1505 +
Chr1	stalkie_big_nohaplotig	CDS	40479013	40479288	.	-	1	Parent=FBgn0010417.1.mrna1;Target=FBgn0010417.1 1047 1322 +
Chr1	stalkie_big_nohaplotig	CDS	40479347	40479516	.	-	0	Parent=FBgn0010417.1.mrna1;Target=FBgn0010417.1 877 1046 +
Chr1	stalkie_big_nohaplotig	CDS	40479578	40480453	.	-	0	Parent=FBgn0010417.1.mrna1;Target=FBgn0010417.1 1 876 +
Chr1	gffcl	locus	40494307	40495756	.	-	.	ID=RLOC_00007367;geneIDs=comp159035_c0_seq1.path1;transcripts=comp159035_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40494307	40495756	.	-	.	ID=comp159035_c0_seq1.mrna1;geneID=comp159035_c0_seq1.path1;Name=comp159035_c0_seq1;Dir=indeterminatecoverage=99.9;identity=95.8;matches=1391;mismatches=58;indels=3;unknowns=0;Target=comp159035_c0_seq1 1452 2 .;CDS_Target=comp159035_c0_seq1 300 295 .;locus=RLOC_00007367
Chr1	stalkie_big_nohaplotig	exon	40494307	40495756	95	-	.	Parent=comp159035_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	40495457	40495462	.	-	0	Parent=comp159035_c0_seq1.mrna1
Chr1	gffcl	locus	40497558	40498468	.	+	.	ID=RLOC_00007368;geneIDs=comp157307_c0_seq1.path1;transcripts=comp157307_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40497558	40498468	.	+	.	ID=comp157307_c0_seq1.mrna1;geneID=comp157307_c0_seq1.path1;Name=comp157307_c0_seq1;Dir=indeterminatecoverage=100.0;identity=85.5;matches=826;mismatches=33;indels=107;unknowns=0;Target=comp157307_c0_seq1 914 1 .;CDS_Target=comp157307_c0_seq1 744 646 .;locus=RLOC_00007368
Chr1	stalkie_big_nohaplotig	exon	40497558	40498468	85	+	.	Parent=comp157307_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	40498246	40498301	.	+	0	Parent=comp157307_c0_seq1.mrna1
Chr1	gffcl	locus	40500603	40503482	.	+	.	ID=RLOC_00007369;geneIDs=FBgn0036888.1.path1;transcripts=FBgn0036888.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40500603	40503482	.	+	.	ID=FBgn0036888.1.mrna1;geneID=FBgn0036888.1.path1;Name=FBgn0036888.1;Dir=sensecoverage=100.0;identity=99.4;matches=1861;mismatches=10;indels=1;unknowns=0;Target=FBgn0036888.1 3 53 +;locus=RLOC_00007369
Chr1	stalkie_big_nohaplotig	exon	40500603	40500697	98	+	.	Parent=FBgn0036888.1.mrna1;Target=FBgn0036888.1 1 96 +
Chr1	stalkie_big_nohaplotig	exon	40500764	40500984	100	+	.	Parent=FBgn0036888.1.mrna1;Target=FBgn0036888.1 97 317 +
Chr1	stalkie_big_nohaplotig	exon	40501045	40501692	99	+	.	Parent=FBgn0036888.1.mrna1;Target=FBgn0036888.1 318 965 +
Chr1	stalkie_big_nohaplotig	exon	40501754	40501927	100	+	.	Parent=FBgn0036888.1.mrna1;Target=FBgn0036888.1 966 1139 +
Chr1	stalkie_big_nohaplotig	exon	40502559	40502739	99	+	.	Parent=FBgn0036888.1.mrna1;Target=FBgn0036888.1 1140 1320 +
Chr1	stalkie_big_nohaplotig	exon	40502805	40503114	99	+	.	Parent=FBgn0036888.1.mrna1;Target=FBgn0036888.1 1321 1630 +
Chr1	stalkie_big_nohaplotig	exon	40503175	40503266	100	+	.	Parent=FBgn0036888.1.mrna1;Target=FBgn0036888.1 1631 1722 +
Chr1	stalkie_big_nohaplotig	exon	40503333	40503482	98	+	.	Parent=FBgn0036888.1.mrna1;Target=FBgn0036888.1 1723 1872 +
Chr1	stalkie_big_nohaplotig	CDS	40500605	40500654	.	+	0	Parent=FBgn0036888.1.mrna1
Chr1	gffcl	locus	40505027	40507513	.	-	.	ID=RLOC_00007370;geneIDs=FBgn0003462.1.path1;transcripts=FBgn0003462.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40505027	40507513	.	-	.	ID=FBgn0003462.1.mrna1;geneID=FBgn0003462.1.path1;Name=FBgn0003462.1;Dir=sensecoverage=100.0;identity=99.6;matches=481;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007370
Chr1	stalkie_big_nohaplotig	exon	40505027	40505200	99	-	.	Parent=FBgn0003462.1.mrna1;Target=FBgn0003462.1 310 483 +
Chr1	stalkie_big_nohaplotig	exon	40505266	40505484	99	-	.	Parent=FBgn0003462.1.mrna1;Target=FBgn0003462.1 91 309 +
Chr1	stalkie_big_nohaplotig	exon	40507424	40507513	100	-	.	Parent=FBgn0003462.1.mrna1;Target=FBgn0003462.1 1 90 +
Chr1	stalkie_big_nohaplotig	CDS	40505027	40505200	.	-	0	Parent=FBgn0003462.1.mrna1;Target=FBgn0003462.1 310 483 +
Chr1	stalkie_big_nohaplotig	CDS	40505266	40505484	.	-	0	Parent=FBgn0003462.1.mrna1;Target=FBgn0003462.1 91 309 +
Chr1	stalkie_big_nohaplotig	CDS	40507424	40507513	.	-	0	Parent=FBgn0003462.1.mrna1;Target=FBgn0003462.1 1 90 +
Chr1	gffcl	locus	40523275	40523774	.	+	.	ID=RLOC_00007371;geneIDs=Dv_FBgn0208770.1.path1;transcripts=Dv_FBgn0208770.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40523275	40523774	.	+	.	ID=Dv_FBgn0208770.1.mrna1;geneID=Dv_FBgn0208770.1.path1;Name=Dv_FBgn0208770.1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=499;mismatches=1;indels=0;unknowns=0;Target=Dv_FBgn0208770.1 500 1 .;CDS_Target=Dv_FBgn0208770.1 498 1 .;locus=RLOC_00007371
Chr1	stalkie_big_nohaplotig	exon	40523275	40523774	99	+	.	Parent=Dv_FBgn0208770.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	40523275	40523772	.	+	0	Parent=Dv_FBgn0208770.1.mrna1
Chr1	gffcl	locus	40524119	40525133	.	+	.	ID=RLOC_00007372;geneIDs=FBgn0036135.1.path1;transcripts=FBgn0036135.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40524119	40525133	.	+	.	ID=FBgn0036135.1.mrna1;geneID=FBgn0036135.1.path1;Name=FBgn0036135.1;Dir=sensecoverage=100.0;identity=99.4;matches=892;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007372
Chr1	stalkie_big_nohaplotig	exon	40524119	40524599	99	+	.	Parent=FBgn0036135.1.mrna1;Target=FBgn0036135.1 1 481 +
Chr1	stalkie_big_nohaplotig	exon	40524655	40524867	100	+	.	Parent=FBgn0036135.1.mrna1;Target=FBgn0036135.1 482 694 +
Chr1	stalkie_big_nohaplotig	exon	40524931	40525133	98	+	.	Parent=FBgn0036135.1.mrna1;Target=FBgn0036135.1 695 897 +
Chr1	stalkie_big_nohaplotig	CDS	40524119	40524599	.	+	0	Parent=FBgn0036135.1.mrna1;Target=FBgn0036135.1 1 481 +
Chr1	stalkie_big_nohaplotig	CDS	40524655	40524867	.	+	2	Parent=FBgn0036135.1.mrna1;Target=FBgn0036135.1 482 694 +
Chr1	stalkie_big_nohaplotig	CDS	40524931	40525133	.	+	2	Parent=FBgn0036135.1.mrna1;Target=FBgn0036135.1 695 897 +
Chr1	gffcl	locus	40525236	40526335	.	-	.	ID=RLOC_00007373;geneIDs=FBgn0036136.1.path1;transcripts=FBgn0036136.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40525236	40526335	.	-	.	ID=FBgn0036136.1.mrna1;geneID=FBgn0036136.1.path1;Name=FBgn0036136.1;Dir=sensecoverage=97.5;identity=100.0;matches=898;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007373
Chr1	stalkie_big_nohaplotig	exon	40525236	40525397	100	-	.	Parent=FBgn0036136.1.mrna1;Target=FBgn0036136.1 760 921 +
Chr1	stalkie_big_nohaplotig	exon	40525459	40525638	100	-	.	Parent=FBgn0036136.1.mrna1;Target=FBgn0036136.1 580 759 +
Chr1	stalkie_big_nohaplotig	exon	40525725	40526152	100	-	.	Parent=FBgn0036136.1.mrna1;Target=FBgn0036136.1 152 579 +
Chr1	stalkie_big_nohaplotig	exon	40526208	40526335	100	-	.	Parent=FBgn0036136.1.mrna1;Target=FBgn0036136.1 24 151 +
Chr1	stalkie_big_nohaplotig	CDS	40525236	40525397	.	-	0	Parent=FBgn0036136.1.mrna1;Target=FBgn0036136.1 760 921 +
Chr1	stalkie_big_nohaplotig	CDS	40525459	40525638	.	-	0	Parent=FBgn0036136.1.mrna1;Target=FBgn0036136.1 580 759 +
Chr1	stalkie_big_nohaplotig	CDS	40525725	40526152	.	-	2	Parent=FBgn0036136.1.mrna1;Target=FBgn0036136.1 152 579 +
Chr1	stalkie_big_nohaplotig	CDS	40526208	40526334	.	-	0	Parent=FBgn0036136.1.mrna1;Target=FBgn0036136.1 25 151 +
Chr1	gffcl	locus	40526491	40549487	.	+	.	ID=RLOC_00007374;geneIDs=comp55676_c0_seq1.path1;transcripts=comp55676_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40526491	40549487	.	+	.	ID=comp55676_c0_seq1.mrna1;geneID=comp55676_c0_seq1.path1;Name=comp55676_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1145;mismatches=3;indels=7;unknowns=0;Target=comp55676_c0_seq1 178 50 .;locus=RLOC_00007374
Chr1	stalkie_big_nohaplotig	exon	40526491	40526539	97	+	.	Parent=comp55676_c0_seq1.mrna1;Target=comp55676_c0_seq1 49 1 .
Chr1	stalkie_big_nohaplotig	exon	40530725	40530907	100	+	.	Parent=comp55676_c0_seq1.mrna1;Target=comp55676_c0_seq1 232 50 .
Chr1	stalkie_big_nohaplotig	exon	40548499	40548551	100	+	.	Parent=comp55676_c0_seq1.mrna1;Target=comp55676_c0_seq1 285 233 .
Chr1	stalkie_big_nohaplotig	exon	40548625	40549487	98	+	.	Parent=comp55676_c0_seq1.mrna1;Target=comp55676_c0_seq1 1155 286 .
Chr1	stalkie_big_nohaplotig	CDS	40530725	40530853	.	+	0	Parent=comp55676_c0_seq1.mrna1
Chr1	gffcl	locus	40549601	40553446	.	+	.	ID=RLOC_00007375;geneIDs=FBgn0260795.1.path1;transcripts=FBgn0260795.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40549601	40553446	.	+	.	ID=FBgn0260795.1.mrna1;geneID=FBgn0260795.1.path1;Name=FBgn0260795.1;Dir=sensecoverage=100.0;identity=99.8;matches=2144;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007375
Chr1	stalkie_big_nohaplotig	exon	40549601	40549814	100	+	.	Parent=FBgn0260795.1.mrna1;Target=FBgn0260795.1 1 214 +
Chr1	stalkie_big_nohaplotig	exon	40549876	40550301	99	+	.	Parent=FBgn0260795.1.mrna1;Target=FBgn0260795.1 215 640 +
Chr1	stalkie_big_nohaplotig	exon	40550367	40550537	100	+	.	Parent=FBgn0260795.1.mrna1;Target=FBgn0260795.1 641 811 +
Chr1	stalkie_big_nohaplotig	exon	40551616	40552033	100	+	.	Parent=FBgn0260795.1.mrna1;Target=FBgn0260795.1 812 1229 +
Chr1	stalkie_big_nohaplotig	exon	40552090	40552425	99	+	.	Parent=FBgn0260795.1.mrna1;Target=FBgn0260795.1 1230 1565 +
Chr1	stalkie_big_nohaplotig	exon	40552756	40552941	100	+	.	Parent=FBgn0260795.1.mrna1;Target=FBgn0260795.1 1566 1751 +
Chr1	stalkie_big_nohaplotig	exon	40553050	40553446	100	+	.	Parent=FBgn0260795.1.mrna1;Target=FBgn0260795.1 1752 2148 +
Chr1	stalkie_big_nohaplotig	CDS	40549601	40549814	.	+	0	Parent=FBgn0260795.1.mrna1;Target=FBgn0260795.1 1 214 +
Chr1	stalkie_big_nohaplotig	CDS	40549876	40550301	.	+	2	Parent=FBgn0260795.1.mrna1;Target=FBgn0260795.1 215 640 +
Chr1	stalkie_big_nohaplotig	CDS	40550367	40550537	.	+	2	Parent=FBgn0260795.1.mrna1;Target=FBgn0260795.1 641 811 +
Chr1	stalkie_big_nohaplotig	CDS	40551616	40552033	.	+	2	Parent=FBgn0260795.1.mrna1;Target=FBgn0260795.1 812 1229 +
Chr1	stalkie_big_nohaplotig	CDS	40552090	40552425	.	+	1	Parent=FBgn0260795.1.mrna1;Target=FBgn0260795.1 1230 1565 +
Chr1	stalkie_big_nohaplotig	CDS	40552756	40552941	.	+	1	Parent=FBgn0260795.1.mrna1;Target=FBgn0260795.1 1566 1751 +
Chr1	stalkie_big_nohaplotig	CDS	40553050	40553446	.	+	1	Parent=FBgn0260795.1.mrna1;Target=FBgn0260795.1 1752 2148 +
Chr1	gffcl	locus	40555785	40556650	.	+	.	ID=RLOC_00007376;geneIDs=comp148725_c1_seq1.path1;transcripts=comp148725_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40555785	40556650	.	+	.	ID=comp148725_c1_seq1.mrna1;geneID=comp148725_c1_seq1.path1;Name=comp148725_c1_seq1;Dir=indeterminatecoverage=98.7;identity=92.9;matches=838;mismatches=21;indels=43;unknowns=0;Target=comp148725_c1_seq1 907 13 .;CDS_Target=comp148725_c1_seq1 385 233 .;locus=RLOC_00007376
Chr1	stalkie_big_nohaplotig	exon	40555785	40556650	92	+	.	Parent=comp148725_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	40556003	40556149	.	+	0	Parent=comp148725_c1_seq1.mrna1
Chr1	gffcl	locus	40621534	40626491	.	+	.	ID=RLOC_00007377;geneIDs=FBgn0052082.1.path1,comp163687_c0_seq1.path1;transcripts=FBgn0052082.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40621534	40626491	.	+	.	ID=FBgn0052082.1.mrna1;geneID=FBgn0052082.1.path1;Name=FBgn0052082.1;Dir=sensecoverage=100.0;identity=99.9;matches=2169;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007377
Chr1	stalkie_big_nohaplotig	exon	40621534	40621650	100	+	.	Parent=FBgn0052082.1.mrna1;Target=FBgn0052082.1 1 117 +
Chr1	stalkie_big_nohaplotig	exon	40621925	40621990	98	+	.	Parent=FBgn0052082.1.mrna1;Target=FBgn0052082.1 118 183 +
Chr1	stalkie_big_nohaplotig	exon	40622169	40622366	100	+	.	Parent=FBgn0052082.1.mrna1;Target=FBgn0052082.1 184 381 +
Chr1	stalkie_big_nohaplotig	exon	40622441	40622627	100	+	.	Parent=FBgn0052082.1.mrna1;Target=FBgn0052082.1 382 568 +
Chr1	stalkie_big_nohaplotig	exon	40622699	40623147	100	+	.	Parent=FBgn0052082.1.mrna1;Target=FBgn0052082.1 569 1017 +
Chr1	stalkie_big_nohaplotig	exon	40623898	40624083	99	+	.	Parent=FBgn0052082.1.mrna1;Target=FBgn0052082.1 1018 1203 +
Chr1	stalkie_big_nohaplotig	exon	40624164	40624324	99	+	.	Parent=FBgn0052082.1.mrna1;Target=FBgn0052082.1 1204 1364 +
Chr1	stalkie_big_nohaplotig	exon	40625684	40626491	100	+	.	Parent=FBgn0052082.1.mrna1;Target=FBgn0052082.1 1365 2172 +
Chr1	stalkie_big_nohaplotig	CDS	40621534	40621650	.	+	0	Parent=FBgn0052082.1.mrna1;Target=FBgn0052082.1 1 117 +
Chr1	stalkie_big_nohaplotig	CDS	40621925	40621990	.	+	0	Parent=FBgn0052082.1.mrna1;Target=FBgn0052082.1 118 183 +
Chr1	stalkie_big_nohaplotig	CDS	40622169	40622366	.	+	0	Parent=FBgn0052082.1.mrna1;Target=FBgn0052082.1 184 381 +
Chr1	stalkie_big_nohaplotig	CDS	40622441	40622627	.	+	0	Parent=FBgn0052082.1.mrna1;Target=FBgn0052082.1 382 568 +
Chr1	stalkie_big_nohaplotig	CDS	40622699	40623147	.	+	2	Parent=FBgn0052082.1.mrna1;Target=FBgn0052082.1 569 1017 +
Chr1	stalkie_big_nohaplotig	CDS	40623898	40624083	.	+	0	Parent=FBgn0052082.1.mrna1;Target=FBgn0052082.1 1018 1203 +
Chr1	stalkie_big_nohaplotig	CDS	40624164	40624324	.	+	0	Parent=FBgn0052082.1.mrna1;Target=FBgn0052082.1 1204 1364 +
Chr1	stalkie_big_nohaplotig	CDS	40625684	40626491	.	+	1	Parent=FBgn0052082.1.mrna1;Target=FBgn0052082.1 1365 2172 +
Chr1	gffcl	locus	40652086	40652780	.	-	.	ID=RLOC_00007378;geneIDs=comp146913_c0_seq1.path1;transcripts=comp146913_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40652086	40652780	.	-	.	ID=comp146913_c0_seq1.mrna1;geneID=comp146913_c0_seq1.path1;Name=comp146913_c0_seq1;Dir=indeterminatecoverage=98.0;identity=99.3;matches=691;mismatches=4;indels=1;unknowns=0;Target=comp146913_c0_seq1 696 1 .;CDS_Target=comp146913_c0_seq1 607 140 .;locus=RLOC_00007378
Chr1	stalkie_big_nohaplotig	exon	40652086	40652780	99	-	.	Parent=comp146913_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	40652175	40652642	.	-	0	Parent=comp146913_c0_seq1.mrna1
Chr1	gffcl	locus	40694336	40695070	.	-	.	ID=RLOC_00007379;geneIDs=comp151766_c0_seq1.path1;transcripts=comp151766_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40694336	40695070	.	-	.	ID=comp151766_c0_seq1.mrna1;geneID=comp151766_c0_seq1.path1;Name=comp151766_c0_seq1;Dir=indeterminatecoverage=95.8;identity=99.3;matches=730;mismatches=5;indels=0;unknowns=0;Target=comp151766_c0_seq1 747 13 .;CDS_Target=comp151766_c0_seq1 635 159 .;locus=RLOC_00007379
Chr1	stalkie_big_nohaplotig	exon	40694336	40695070	99	-	.	Parent=comp151766_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	40694448	40694924	.	-	0	Parent=comp151766_c0_seq1.mrna1
Chr1	gffcl	locus	40708715	40717117	.	+	.	ID=RLOC_00007380;geneIDs=comp157928_c0_seq1.path1;transcripts=comp157928_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40708715	40717117	.	+	.	ID=comp157928_c0_seq1.mrna1;geneID=comp157928_c0_seq1.path1;Name=comp157928_c0_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=1694;mismatches=13;indels=2;unknowns=0;Target=comp157928_c0_seq1 1148 1291 .;locus=RLOC_00007380
Chr1	stalkie_big_nohaplotig	exon	40708715	40709345	98	+	.	Parent=comp157928_c0_seq1.mrna1;Target=comp157928_c0_seq1 1078 1709 -
Chr1	stalkie_big_nohaplotig	exon	40709417	40709438	100	+	.	Parent=comp157928_c0_seq1.mrna1;Target=comp157928_c0_seq1 1056 1077 -
Chr1	stalkie_big_nohaplotig	exon	40716064	40717117	99	+	.	Parent=comp157928_c0_seq1.mrna1;Target=comp157928_c0_seq1 1 1055 -
Chr1	stalkie_big_nohaplotig	CDS	40709133	40709275	.	+	0	Parent=comp157928_c0_seq1.mrna1
Chr1	gffcl	locus	40709538	40713307	.	-	.	ID=RLOC_00007381;geneIDs=FBgn0020277.1.path2;transcripts=FBgn0020277.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	40709538	40713307	.	-	.	ID=FBgn0020277.1.mrna2;geneID=FBgn0020277.1.path2;Name=FBgn0020277.1;Dir=sensecoverage=99.6;identity=99.8;matches=444;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007381
Chr1	stalkie_big_nohaplotig	exon	40709538	40709623	98	-	.	Parent=FBgn0020277.1.mrna2;Target=FBgn0020277.1 362 447 +
Chr1	stalkie_big_nohaplotig	exon	40709705	40709819	100	-	.	Parent=FBgn0020277.1.mrna2;Target=FBgn0020277.1 247 361 +
Chr1	stalkie_big_nohaplotig	exon	40709899	40709934	100	-	.	Parent=FBgn0020277.1.mrna2;Target=FBgn0020277.1 211 246 +
Chr1	stalkie_big_nohaplotig	exon	40710049	40710180	100	-	.	Parent=FBgn0020277.1.mrna2;Target=FBgn0020277.1 79 210 +
Chr1	stalkie_big_nohaplotig	exon	40713232	40713307	100	-	.	Parent=FBgn0020277.1.mrna2;Target=FBgn0020277.1 3 78 +
Chr1	stalkie_big_nohaplotig	CDS	40709538	40709623	.	-	2	Parent=FBgn0020277.1.mrna2;Target=FBgn0020277.1 362 447 +
Chr1	stalkie_big_nohaplotig	CDS	40709705	40709819	.	-	0	Parent=FBgn0020277.1.mrna2;Target=FBgn0020277.1 247 361 +
Chr1	stalkie_big_nohaplotig	CDS	40709899	40709934	.	-	0	Parent=FBgn0020277.1.mrna2;Target=FBgn0020277.1 211 246 +
Chr1	stalkie_big_nohaplotig	CDS	40710049	40710180	.	-	0	Parent=FBgn0020277.1.mrna2;Target=FBgn0020277.1 79 210 +
Chr1	stalkie_big_nohaplotig	CDS	40713232	40713306	.	-	0	Parent=FBgn0020277.1.mrna2;Target=FBgn0020277.1 4 78 +
Chr1	gffcl	locus	40736762	40737184	.	-	.	ID=RLOC_00007383;geneIDs=comp116429_c0_seq1.path1;transcripts=comp116429_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40736762	40737184	.	-	.	ID=comp116429_c0_seq1.mrna1;geneID=comp116429_c0_seq1.path1;Name=comp116429_c0_seq1;Dir=indeterminatecoverage=99.5;identity=97.9;matches=417;mismatches=5;indels=4;unknowns=0;Target=comp116429_c0_seq1 425 1 .;CDS_Target=comp116429_c0_seq1 389 249 .;locus=RLOC_00007383
Chr1	stalkie_big_nohaplotig	exon	40736762	40737184	97	-	.	Parent=comp116429_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	40736798	40736938	.	-	0	Parent=comp116429_c0_seq1.mrna1
Chr1	gffcl	locus	40738567	40741498	.	+	.	ID=RLOC_00007384;geneIDs=FBgn0036891.1.path1;transcripts=FBgn0036891.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40738567	40741498	.	+	.	ID=FBgn0036891.1.mrna1;geneID=FBgn0036891.1.path1;Name=FBgn0036891.1;Dir=sensecoverage=100.0;identity=99.7;matches=1265;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007384
Chr1	stalkie_big_nohaplotig	exon	40738567	40738681	99	+	.	Parent=FBgn0036891.1.mrna1;Target=FBgn0036891.1 1 115 +
Chr1	stalkie_big_nohaplotig	exon	40738792	40738952	99	+	.	Parent=FBgn0036891.1.mrna1;Target=FBgn0036891.1 116 276 +
Chr1	stalkie_big_nohaplotig	exon	40739016	40739152	99	+	.	Parent=FBgn0036891.1.mrna1;Target=FBgn0036891.1 277 413 +
Chr1	stalkie_big_nohaplotig	exon	40739217	40739802	100	+	.	Parent=FBgn0036891.1.mrna1;Target=FBgn0036891.1 414 999 +
Chr1	stalkie_big_nohaplotig	exon	40741229	40741498	99	+	.	Parent=FBgn0036891.1.mrna1;Target=FBgn0036891.1 1000 1269 +
Chr1	stalkie_big_nohaplotig	CDS	40738567	40738681	.	+	0	Parent=FBgn0036891.1.mrna1;Target=FBgn0036891.1 1 115 +
Chr1	stalkie_big_nohaplotig	CDS	40738792	40738952	.	+	2	Parent=FBgn0036891.1.mrna1;Target=FBgn0036891.1 116 276 +
Chr1	stalkie_big_nohaplotig	CDS	40739016	40739152	.	+	0	Parent=FBgn0036891.1.mrna1;Target=FBgn0036891.1 277 413 +
Chr1	stalkie_big_nohaplotig	CDS	40739217	40739802	.	+	1	Parent=FBgn0036891.1.mrna1;Target=FBgn0036891.1 414 999 +
Chr1	stalkie_big_nohaplotig	CDS	40741229	40741498	.	+	0	Parent=FBgn0036891.1.mrna1;Target=FBgn0036891.1 1000 1269 +
Chr1	gffcl	locus	40741678	40746123	.	-	.	ID=RLOC_00007385;geneIDs=FBgn0036892.1.path1;transcripts=FBgn0036892.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40741678	40746123	.	-	.	ID=FBgn0036892.1.mrna1;geneID=FBgn0036892.1.path1;Name=FBgn0036892.1;Dir=sensecoverage=100.0;identity=99.6;matches=2963;mismatches=13;indels=0;unknowns=0;locus=RLOC_00007385
Chr1	stalkie_big_nohaplotig	exon	40741678	40741827	99	-	.	Parent=FBgn0036892.1.mrna1;Target=FBgn0036892.1 2827 2976 +
Chr1	stalkie_big_nohaplotig	exon	40741911	40742100	100	-	.	Parent=FBgn0036892.1.mrna1;Target=FBgn0036892.1 2637 2826 +
Chr1	stalkie_big_nohaplotig	exon	40742160	40742515	99	-	.	Parent=FBgn0036892.1.mrna1;Target=FBgn0036892.1 2281 2636 +
Chr1	stalkie_big_nohaplotig	exon	40742581	40742944	99	-	.	Parent=FBgn0036892.1.mrna1;Target=FBgn0036892.1 1917 2280 +
Chr1	stalkie_big_nohaplotig	exon	40743012	40743204	97	-	.	Parent=FBgn0036892.1.mrna1;Target=FBgn0036892.1 1724 1916 +
Chr1	stalkie_big_nohaplotig	exon	40743263	40743492	99	-	.	Parent=FBgn0036892.1.mrna1;Target=FBgn0036892.1 1494 1723 +
Chr1	stalkie_big_nohaplotig	exon	40743556	40743860	100	-	.	Parent=FBgn0036892.1.mrna1;Target=FBgn0036892.1 1189 1493 +
Chr1	stalkie_big_nohaplotig	exon	40744591	40744720	100	-	.	Parent=FBgn0036892.1.mrna1;Target=FBgn0036892.1 1059 1188 +
Chr1	stalkie_big_nohaplotig	exon	40744786	40745236	99	-	.	Parent=FBgn0036892.1.mrna1;Target=FBgn0036892.1 608 1058 +
Chr1	stalkie_big_nohaplotig	exon	40745461	40745719	100	-	.	Parent=FBgn0036892.1.mrna1;Target=FBgn0036892.1 349 607 +
Chr1	stalkie_big_nohaplotig	exon	40745776	40746123	100	-	.	Parent=FBgn0036892.1.mrna1;Target=FBgn0036892.1 1 348 +
Chr1	stalkie_big_nohaplotig	CDS	40741678	40741827	.	-	0	Parent=FBgn0036892.1.mrna1;Target=FBgn0036892.1 2827 2976 +
Chr1	stalkie_big_nohaplotig	CDS	40741911	40742100	.	-	1	Parent=FBgn0036892.1.mrna1;Target=FBgn0036892.1 2637 2826 +
Chr1	stalkie_big_nohaplotig	CDS	40742160	40742515	.	-	0	Parent=FBgn0036892.1.mrna1;Target=FBgn0036892.1 2281 2636 +
Chr1	stalkie_big_nohaplotig	CDS	40742581	40742944	.	-	1	Parent=FBgn0036892.1.mrna1;Target=FBgn0036892.1 1917 2280 +
Chr1	stalkie_big_nohaplotig	CDS	40743012	40743204	.	-	2	Parent=FBgn0036892.1.mrna1;Target=FBgn0036892.1 1724 1916 +
Chr1	stalkie_big_nohaplotig	CDS	40743263	40743492	.	-	1	Parent=FBgn0036892.1.mrna1;Target=FBgn0036892.1 1494 1723 +
Chr1	stalkie_big_nohaplotig	CDS	40743556	40743860	.	-	0	Parent=FBgn0036892.1.mrna1;Target=FBgn0036892.1 1189 1493 +
Chr1	stalkie_big_nohaplotig	CDS	40744591	40744720	.	-	1	Parent=FBgn0036892.1.mrna1;Target=FBgn0036892.1 1059 1188 +
Chr1	stalkie_big_nohaplotig	CDS	40744786	40745236	.	-	2	Parent=FBgn0036892.1.mrna1;Target=FBgn0036892.1 608 1058 +
Chr1	stalkie_big_nohaplotig	CDS	40745461	40745719	.	-	0	Parent=FBgn0036892.1.mrna1;Target=FBgn0036892.1 349 607 +
Chr1	stalkie_big_nohaplotig	CDS	40745776	40746123	.	-	0	Parent=FBgn0036892.1.mrna1;Target=FBgn0036892.1 1 348 +
Chr1	gffcl	locus	40751504	40755591	.	+	.	ID=RLOC_00007386;geneIDs=FBgn0036975.1.path1;transcripts=FBgn0036975.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40751504	40755591	.	+	.	ID=FBgn0036975.1.mrna1;geneID=FBgn0036975.1.path1;Name=FBgn0036975.1;Dir=sensecoverage=100.0;identity=99.9;matches=1564;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007386
Chr1	stalkie_big_nohaplotig	exon	40751504	40751722	100	+	.	Parent=FBgn0036975.1.mrna1;Target=FBgn0036975.1 1 219 +
Chr1	stalkie_big_nohaplotig	exon	40752634	40752821	100	+	.	Parent=FBgn0036975.1.mrna1;Target=FBgn0036975.1 220 407 +
Chr1	stalkie_big_nohaplotig	exon	40753899	40754024	100	+	.	Parent=FBgn0036975.1.mrna1;Target=FBgn0036975.1 408 533 +
Chr1	stalkie_big_nohaplotig	exon	40754438	40754786	100	+	.	Parent=FBgn0036975.1.mrna1;Target=FBgn0036975.1 534 882 +
Chr1	stalkie_big_nohaplotig	exon	40754850	40755347	99	+	.	Parent=FBgn0036975.1.mrna1;Target=FBgn0036975.1 883 1380 +
Chr1	stalkie_big_nohaplotig	exon	40755406	40755591	100	+	.	Parent=FBgn0036975.1.mrna1;Target=FBgn0036975.1 1381 1566 +
Chr1	stalkie_big_nohaplotig	CDS	40751504	40751722	.	+	0	Parent=FBgn0036975.1.mrna1;Target=FBgn0036975.1 1 219 +
Chr1	stalkie_big_nohaplotig	CDS	40752634	40752821	.	+	0	Parent=FBgn0036975.1.mrna1;Target=FBgn0036975.1 220 407 +
Chr1	stalkie_big_nohaplotig	CDS	40753899	40754024	.	+	1	Parent=FBgn0036975.1.mrna1;Target=FBgn0036975.1 408 533 +
Chr1	stalkie_big_nohaplotig	CDS	40754438	40754786	.	+	1	Parent=FBgn0036975.1.mrna1;Target=FBgn0036975.1 534 882 +
Chr1	stalkie_big_nohaplotig	CDS	40754850	40755347	.	+	0	Parent=FBgn0036975.1.mrna1;Target=FBgn0036975.1 883 1380 +
Chr1	stalkie_big_nohaplotig	CDS	40755406	40755591	.	+	0	Parent=FBgn0036975.1.mrna1;Target=FBgn0036975.1 1381 1566 +
Chr1	gffcl	locus	40833297	40851725	.	+	.	ID=RLOC_00007388;geneIDs=FBgn0250876.1.path1;transcripts=FBgn0250876.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40833297	40851725	.	+	.	ID=FBgn0250876.1.mrna1;geneID=FBgn0250876.1.path1;Name=FBgn0250876.1;Dir=sensecoverage=99.8;identity=99.4;matches=3268;mismatches=21;indels=0;unknowns=0;locus=RLOC_00007388
Chr1	stalkie_big_nohaplotig	exon	40833297	40833442	100	+	.	Parent=FBgn0250876.1.mrna1;Target=FBgn0250876.1 9 154 +
Chr1	stalkie_big_nohaplotig	exon	40836157	40836256	100	+	.	Parent=FBgn0250876.1.mrna1;Target=FBgn0250876.1 155 254 +
Chr1	stalkie_big_nohaplotig	exon	40847111	40847318	100	+	.	Parent=FBgn0250876.1.mrna1;Target=FBgn0250876.1 255 462 +
Chr1	stalkie_big_nohaplotig	exon	40847469	40847642	98	+	.	Parent=FBgn0250876.1.mrna1;Target=FBgn0250876.1 463 636 +
Chr1	stalkie_big_nohaplotig	exon	40847728	40847874	99	+	.	Parent=FBgn0250876.1.mrna1;Target=FBgn0250876.1 637 783 +
Chr1	stalkie_big_nohaplotig	exon	40848915	40849114	99	+	.	Parent=FBgn0250876.1.mrna1;Target=FBgn0250876.1 784 983 +
Chr1	stalkie_big_nohaplotig	exon	40849175	40850919	99	+	.	Parent=FBgn0250876.1.mrna1;Target=FBgn0250876.1 984 2728 +
Chr1	stalkie_big_nohaplotig	exon	40850977	40851132	98	+	.	Parent=FBgn0250876.1.mrna1;Target=FBgn0250876.1 2729 2884 +
Chr1	stalkie_big_nohaplotig	exon	40851244	40851440	98	+	.	Parent=FBgn0250876.1.mrna1;Target=FBgn0250876.1 2885 3081 +
Chr1	stalkie_big_nohaplotig	exon	40851510	40851725	98	+	.	Parent=FBgn0250876.1.mrna1;Target=FBgn0250876.1 3082 3297 +
Chr1	stalkie_big_nohaplotig	CDS	40833298	40833442	.	+	0	Parent=FBgn0250876.1.mrna1;Target=FBgn0250876.1 10 154 +
Chr1	stalkie_big_nohaplotig	CDS	40836157	40836256	.	+	2	Parent=FBgn0250876.1.mrna1;Target=FBgn0250876.1 155 254 +
Chr1	stalkie_big_nohaplotig	CDS	40847111	40847318	.	+	1	Parent=FBgn0250876.1.mrna1;Target=FBgn0250876.1 255 462 +
Chr1	stalkie_big_nohaplotig	CDS	40847469	40847642	.	+	0	Parent=FBgn0250876.1.mrna1;Target=FBgn0250876.1 463 636 +
Chr1	stalkie_big_nohaplotig	CDS	40847728	40847874	.	+	0	Parent=FBgn0250876.1.mrna1;Target=FBgn0250876.1 637 783 +
Chr1	stalkie_big_nohaplotig	CDS	40848915	40849114	.	+	0	Parent=FBgn0250876.1.mrna1;Target=FBgn0250876.1 784 983 +
Chr1	stalkie_big_nohaplotig	CDS	40849175	40850919	.	+	1	Parent=FBgn0250876.1.mrna1;Target=FBgn0250876.1 984 2728 +
Chr1	stalkie_big_nohaplotig	CDS	40850977	40851132	.	+	2	Parent=FBgn0250876.1.mrna1;Target=FBgn0250876.1 2729 2884 +
Chr1	stalkie_big_nohaplotig	CDS	40851244	40851440	.	+	2	Parent=FBgn0250876.1.mrna1;Target=FBgn0250876.1 2885 3081 +
Chr1	stalkie_big_nohaplotig	CDS	40851510	40851725	.	+	0	Parent=FBgn0250876.1.mrna1;Target=FBgn0250876.1 3082 3297 +
Chr1	gffcl	locus	40876537	40877049	.	-	.	ID=RLOC_00007389;geneIDs=comp143967_c0_seq1.path1;transcripts=comp143967_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40876537	40877049	.	-	.	ID=comp143967_c0_seq1.mrna1;geneID=comp143967_c0_seq1.path1;Name=comp143967_c0_seq1;Dir=antisensecoverage=96.0;identity=98.0;matches=448;mismatches=9;indels=0;unknowns=0;locus=RLOC_00007389
Chr1	stalkie_big_nohaplotig	exon	40876537	40876959	98	-	.	Parent=comp143967_c0_seq1.mrna1;Target=comp143967_c0_seq1 20 442 -
Chr1	stalkie_big_nohaplotig	exon	40877016	40877049	97	-	.	Parent=comp143967_c0_seq1.mrna1;Target=comp143967_c0_seq1 443 476 -
Chr1	stalkie_big_nohaplotig	CDS	40876538	40876959	.	-	2	Parent=comp143967_c0_seq1.mrna1;Target=comp143967_c0_seq1 21 442 .
Chr1	stalkie_big_nohaplotig	CDS	40877016	40877049	.	-	0	Parent=comp143967_c0_seq1.mrna1;Target=comp143967_c0_seq1 443 476 .
Chr1	gffcl	locus	40890975	40891373	.	+	.	ID=RLOC_00007390;geneIDs=comp143832_c1_seq1.path1;transcripts=comp143832_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40890975	40891373	.	+	.	ID=comp143832_c1_seq1.mrna1;geneID=comp143832_c1_seq1.path1;Name=comp143832_c1_seq1;Dir=indeterminatecoverage=99.8;identity=99.5;matches=397;mismatches=2;indels=0;unknowns=0;Target=comp143832_c1_seq1 400 2 .;CDS_Target=comp143832_c1_seq1 227 3 .;locus=RLOC_00007390
Chr1	stalkie_big_nohaplotig	exon	40890975	40891373	99	+	.	Parent=comp143832_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	40890976	40891200	.	+	0	Parent=comp143832_c1_seq1.mrna1
Chr1	gffcl	locus	40891651	40971670	.	+	.	ID=RLOC_00007391;geneIDs=FBgn0041096.1.path1;transcripts=FBgn0041096.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40891651	40971670	.	+	.	ID=FBgn0041096.1.mrna1;geneID=FBgn0041096.1.path1;Name=FBgn0041096.1;Dir=sensecoverage=100.0;identity=99.6;matches=4278;mismatches=18;indels=0;unknowns=0;locus=RLOC_00007391
Chr1	stalkie_big_nohaplotig	exon	40891651	40891759	100	+	.	Parent=FBgn0041096.1.mrna1;Target=FBgn0041096.1 1 109 +
Chr1	stalkie_big_nohaplotig	exon	40938369	40938551	100	+	.	Parent=FBgn0041096.1.mrna1;Target=FBgn0041096.1 110 292 +
Chr1	stalkie_big_nohaplotig	exon	40940530	40940681	100	+	.	Parent=FBgn0041096.1.mrna1;Target=FBgn0041096.1 293 444 +
Chr1	stalkie_big_nohaplotig	exon	40966822	40967098	100	+	.	Parent=FBgn0041096.1.mrna1;Target=FBgn0041096.1 445 721 +
Chr1	stalkie_big_nohaplotig	exon	40968015	40971262	99	+	.	Parent=FBgn0041096.1.mrna1;Target=FBgn0041096.1 722 3969 +
Chr1	stalkie_big_nohaplotig	exon	40971344	40971670	100	+	.	Parent=FBgn0041096.1.mrna1;Target=FBgn0041096.1 3970 4296 +
Chr1	stalkie_big_nohaplotig	CDS	40891651	40891759	.	+	0	Parent=FBgn0041096.1.mrna1;Target=FBgn0041096.1 1 109 +
Chr1	stalkie_big_nohaplotig	CDS	40938369	40938551	.	+	2	Parent=FBgn0041096.1.mrna1;Target=FBgn0041096.1 110 292 +
Chr1	stalkie_big_nohaplotig	CDS	40940530	40940681	.	+	2	Parent=FBgn0041096.1.mrna1;Target=FBgn0041096.1 293 444 +
Chr1	stalkie_big_nohaplotig	CDS	40966822	40967098	.	+	0	Parent=FBgn0041096.1.mrna1;Target=FBgn0041096.1 445 721 +
Chr1	stalkie_big_nohaplotig	CDS	40968015	40971262	.	+	2	Parent=FBgn0041096.1.mrna1;Target=FBgn0041096.1 722 3969 +
Chr1	stalkie_big_nohaplotig	CDS	40971344	40971670	.	+	0	Parent=FBgn0041096.1.mrna1;Target=FBgn0041096.1 3970 4296 +
Chr1	gffcl	locus	40949502	40951016	.	+	.	ID=RLOC_00007392;geneIDs=comp67295_c0_seq1.path1;transcripts=comp67295_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40949502	40951016	.	+	.	ID=comp67295_c0_seq1.mrna1;geneID=comp67295_c0_seq1.path1;Name=comp67295_c0_seq1;Dir=sensecoverage=89.5;identity=89.4;matches=523;mismatches=21;indels=41;unknowns=0;Target=comp67295_c0_seq1 493 609 +;locus=RLOC_00007392
Chr1	stalkie_big_nohaplotig	exon	40949502	40949577	97	+	.	Parent=comp67295_c0_seq1.mrna1;Target=comp67295_c0_seq1 65 140 +
Chr1	stalkie_big_nohaplotig	exon	40950301	40950387	100	+	.	Parent=comp67295_c0_seq1.mrna1;Target=comp67295_c0_seq1 141 227 +
Chr1	stalkie_big_nohaplotig	exon	40950597	40951016	85	+	.	Parent=comp67295_c0_seq1.mrna1;Target=comp67295_c0_seq1 228 610 +
Chr1	stalkie_big_nohaplotig	CDS	40950898	40951015	.	+	0	Parent=comp67295_c0_seq1.mrna1
Chr1	gffcl	locus	40972140	40976660	.	-	.	ID=RLOC_00007393;geneIDs=FBgn0036240.1.path1;transcripts=FBgn0036240.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40972140	40976660	.	-	.	ID=FBgn0036240.1.mrna1;geneID=FBgn0036240.1.path1;Name=FBgn0036240.1;Dir=sensecoverage=100.0;identity=99.7;matches=1837;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007393
Chr1	stalkie_big_nohaplotig	exon	40972140	40972261	100	-	.	Parent=FBgn0036240.1.mrna1;Target=FBgn0036240.1 1721 1842 +
Chr1	stalkie_big_nohaplotig	exon	40973378	40973557	98	-	.	Parent=FBgn0036240.1.mrna1;Target=FBgn0036240.1 1541 1720 +
Chr1	stalkie_big_nohaplotig	exon	40973620	40973767	99	-	.	Parent=FBgn0036240.1.mrna1;Target=FBgn0036240.1 1393 1540 +
Chr1	stalkie_big_nohaplotig	exon	40973847	40974020	100	-	.	Parent=FBgn0036240.1.mrna1;Target=FBgn0036240.1 1219 1392 +
Chr1	stalkie_big_nohaplotig	exon	40974237	40974587	99	-	.	Parent=FBgn0036240.1.mrna1;Target=FBgn0036240.1 868 1218 +
Chr1	stalkie_big_nohaplotig	exon	40974648	40974917	100	-	.	Parent=FBgn0036240.1.mrna1;Target=FBgn0036240.1 598 867 +
Chr1	stalkie_big_nohaplotig	exon	40975809	40975946	100	-	.	Parent=FBgn0036240.1.mrna1;Target=FBgn0036240.1 460 597 +
Chr1	stalkie_big_nohaplotig	exon	40976011	40976096	100	-	.	Parent=FBgn0036240.1.mrna1;Target=FBgn0036240.1 374 459 +
Chr1	stalkie_big_nohaplotig	exon	40976210	40976414	99	-	.	Parent=FBgn0036240.1.mrna1;Target=FBgn0036240.1 169 373 +
Chr1	stalkie_big_nohaplotig	exon	40976493	40976660	100	-	.	Parent=FBgn0036240.1.mrna1;Target=FBgn0036240.1 1 168 +
Chr1	stalkie_big_nohaplotig	CDS	40972140	40972261	.	-	2	Parent=FBgn0036240.1.mrna1;Target=FBgn0036240.1 1721 1842 +
Chr1	stalkie_big_nohaplotig	CDS	40973378	40973557	.	-	2	Parent=FBgn0036240.1.mrna1;Target=FBgn0036240.1 1541 1720 +
Chr1	stalkie_big_nohaplotig	CDS	40973620	40973767	.	-	0	Parent=FBgn0036240.1.mrna1;Target=FBgn0036240.1 1393 1540 +
Chr1	stalkie_big_nohaplotig	CDS	40973847	40974020	.	-	0	Parent=FBgn0036240.1.mrna1;Target=FBgn0036240.1 1219 1392 +
Chr1	stalkie_big_nohaplotig	CDS	40974237	40974587	.	-	0	Parent=FBgn0036240.1.mrna1;Target=FBgn0036240.1 868 1218 +
Chr1	stalkie_big_nohaplotig	CDS	40974648	40974917	.	-	0	Parent=FBgn0036240.1.mrna1;Target=FBgn0036240.1 598 867 +
Chr1	stalkie_big_nohaplotig	CDS	40975809	40975946	.	-	0	Parent=FBgn0036240.1.mrna1;Target=FBgn0036240.1 460 597 +
Chr1	stalkie_big_nohaplotig	CDS	40976011	40976096	.	-	2	Parent=FBgn0036240.1.mrna1;Target=FBgn0036240.1 374 459 +
Chr1	stalkie_big_nohaplotig	CDS	40976210	40976414	.	-	0	Parent=FBgn0036240.1.mrna1;Target=FBgn0036240.1 169 373 +
Chr1	stalkie_big_nohaplotig	CDS	40976493	40976660	.	-	0	Parent=FBgn0036240.1.mrna1;Target=FBgn0036240.1 1 168 +
Chr1	gffcl	locus	40999305	41000447	.	-	.	ID=RLOC_00007394;geneIDs=comp154989_c0_seq1.path1;transcripts=comp154989_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	40999305	41000447	.	-	.	ID=comp154989_c0_seq1.mrna1;geneID=comp154989_c0_seq1.path1;Name=comp154989_c0_seq1;Dir=indeterminatecoverage=95.1;identity=99.3;matches=1135;mismatches=7;indels=1;unknowns=0;Target=comp154989_c0_seq1 1201 60 .;CDS_Target=comp154989_c0_seq1 1146 1006 .;locus=RLOC_00007394
Chr1	stalkie_big_nohaplotig	exon	40999305	41000447	99	-	.	Parent=comp154989_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	40999361	40999501	.	-	0	Parent=comp154989_c0_seq1.mrna1
Chr1	gffcl	locus	41002038	41009430	.	+	.	ID=RLOC_00007395;geneIDs=FBgn0036239.3.path1;transcripts=FBgn0036239.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41002038	41009430	.	+	.	ID=FBgn0036239.3.mrna1;geneID=FBgn0036239.3.path1;Name=FBgn0036239.3;Dir=sensecoverage=100.0;identity=99.8;matches=940;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007395
Chr1	stalkie_big_nohaplotig	exon	41002038	41002076	100	+	.	Parent=FBgn0036239.3.mrna1;Target=FBgn0036239.3 1 39 +
Chr1	stalkie_big_nohaplotig	exon	41002475	41002836	100	+	.	Parent=FBgn0036239.3.mrna1;Target=FBgn0036239.3 40 401 +
Chr1	stalkie_big_nohaplotig	exon	41004171	41004588	99	+	.	Parent=FBgn0036239.3.mrna1;Target=FBgn0036239.3 402 819 +
Chr1	stalkie_big_nohaplotig	exon	41009308	41009430	100	+	.	Parent=FBgn0036239.3.mrna1;Target=FBgn0036239.3 820 942 +
Chr1	stalkie_big_nohaplotig	CDS	41002038	41002076	.	+	0	Parent=FBgn0036239.3.mrna1;Target=FBgn0036239.3 1 39 +
Chr1	stalkie_big_nohaplotig	CDS	41002475	41002836	.	+	0	Parent=FBgn0036239.3.mrna1;Target=FBgn0036239.3 40 401 +
Chr1	stalkie_big_nohaplotig	CDS	41004171	41004588	.	+	1	Parent=FBgn0036239.3.mrna1;Target=FBgn0036239.3 402 819 +
Chr1	stalkie_big_nohaplotig	CDS	41009308	41009430	.	+	0	Parent=FBgn0036239.3.mrna1;Target=FBgn0036239.3 820 942 +
Chr1	gffcl	locus	41006482	41006712	.	+	.	ID=RLOC_00007396;geneIDs=comp119175_c0_seq1.path1;transcripts=comp119175_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41006482	41006712	.	+	.	ID=comp119175_c0_seq1.mrna1;geneID=comp119175_c0_seq1.path1;Name=comp119175_c0_seq1;Dir=indeterminatecoverage=93.5;identity=98.3;matches=227;mismatches=4;indels=0;unknowns=0;Target=comp119175_c0_seq1 231 1 .;CDS_Target=comp119175_c0_seq1 53 3 .;locus=RLOC_00007396
Chr1	stalkie_big_nohaplotig	exon	41006482	41006712	98	+	.	Parent=comp119175_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	41006484	41006534	.	+	0	Parent=comp119175_c0_seq1.mrna1
Chr1	gffcl	locus	41006828	41007281	.	-	.	ID=RLOC_00007397;geneIDs=comp151401_c0_seq1.path1;transcripts=comp151401_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41006828	41007281	.	-	.	ID=comp151401_c0_seq1.mrna1;geneID=comp151401_c0_seq1.path1;Name=comp151401_c0_seq1;Dir=indeterminatecoverage=97.0;identity=98.2;matches=447;mismatches=7;indels=1;unknowns=0;Target=comp151401_c0_seq1 455 1 .;CDS_Target=comp151401_c0_seq1 138 1 .;locus=RLOC_00007397
Chr1	stalkie_big_nohaplotig	exon	41006828	41007281	98	-	.	Parent=comp151401_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	41007144	41007281	.	-	0	Parent=comp151401_c0_seq1.mrna1
Chr1	gffcl	locus	41010892	41012973	.	-	.	ID=RLOC_00007398;geneIDs=FBgn0036397.1.path1;transcripts=FBgn0036397.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41010892	41012973	.	-	.	ID=FBgn0036397.1.mrna1;geneID=FBgn0036397.1.path1;Name=FBgn0036397.1;Dir=sensecoverage=100.0;identity=99.6;matches=1936;mismatches=8;indels=0;unknowns=0;locus=RLOC_00007398
Chr1	stalkie_big_nohaplotig	exon	41010892	41011216	99	-	.	Parent=FBgn0036397.1.mrna1;Target=FBgn0036397.1 1620 1944 +
Chr1	stalkie_big_nohaplotig	exon	41011293	41011448	100	-	.	Parent=FBgn0036397.1.mrna1;Target=FBgn0036397.1 1464 1619 +
Chr1	stalkie_big_nohaplotig	exon	41011511	41012973	99	-	.	Parent=FBgn0036397.1.mrna1;Target=FBgn0036397.1 1 1463 +
Chr1	stalkie_big_nohaplotig	CDS	41010892	41011216	.	-	1	Parent=FBgn0036397.1.mrna1;Target=FBgn0036397.1 1620 1944 +
Chr1	stalkie_big_nohaplotig	CDS	41011293	41011448	.	-	1	Parent=FBgn0036397.1.mrna1;Target=FBgn0036397.1 1464 1619 +
Chr1	stalkie_big_nohaplotig	CDS	41011511	41012973	.	-	0	Parent=FBgn0036397.1.mrna1;Target=FBgn0036397.1 1 1463 +
Chr1	gffcl	locus	41024582	41025651	.	-	.	ID=RLOC_00007399;geneIDs=comp151904_c0_seq1.path1;transcripts=comp151904_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41024582	41025651	.	-	.	ID=comp151904_c0_seq1.mrna1;geneID=comp151904_c0_seq1.path1;Name=comp151904_c0_seq1;Dir=indeterminatecoverage=98.8;identity=98.1;matches=1055;mismatches=8;indels=12;unknowns=0;Target=comp151904_c0_seq1 1068 1 .;CDS_Target=comp151904_c0_seq1 725 552 .;locus=RLOC_00007399
Chr1	stalkie_big_nohaplotig	exon	41024582	41025651	98	-	.	Parent=comp151904_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	41024920	41025093	.	-	0	Parent=comp151904_c0_seq1.mrna1
Chr1	gffcl	locus	41025870	41039139	.	+	.	ID=RLOC_00007400;geneIDs=FBgn0036398.1.path1,comp163639_c4_seq1.path1;transcripts=comp163639_c4_seq1.mrna1,FBgn0036398.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41025870	41039139	.	+	.	ID=comp163639_c4_seq1.mrna1;geneID=comp163639_c4_seq1.path1;Name=comp163639_c4_seq1;Dir=sensecoverage=93.1;identity=99.8;matches=10124;mismatches=16;indels=9;unknowns=0;locus=RLOC_00007400
Chr1	stalkie_big_nohaplotig	exon	41025870	41028137	99	+	.	Parent=comp163639_c4_seq1.mrna1;Target=comp163639_c4_seq1 749 3018 +
Chr1	stalkie_big_nohaplotig	exon	41029602	41030146	100	+	.	Parent=comp163639_c4_seq1.mrna1;Target=comp163639_c4_seq1 3019 3563 +
Chr1	stalkie_big_nohaplotig	exon	41030248	41030440	100	+	.	Parent=comp163639_c4_seq1.mrna1;Target=comp163639_c4_seq1 3564 3756 +
Chr1	stalkie_big_nohaplotig	exon	41030537	41036910	99	+	.	Parent=comp163639_c4_seq1.mrna1;Target=comp163639_c4_seq1 3757 10136 +
Chr1	stalkie_big_nohaplotig	exon	41038101	41038193	100	+	.	Parent=comp163639_c4_seq1.mrna1;Target=comp163639_c4_seq1 10137 10229 +
Chr1	stalkie_big_nohaplotig	exon	41038473	41039139	99	+	.	Parent=comp163639_c4_seq1.mrna1;Target=comp163639_c4_seq1 10230 10897 +
Chr1	stalkie_big_nohaplotig	CDS	41026219	41028137	.	+	0	Parent=comp163639_c4_seq1.mrna1;Target=comp163639_c4_seq1 1100 3018 +
Chr1	stalkie_big_nohaplotig	CDS	41029602	41030146	.	+	1	Parent=comp163639_c4_seq1.mrna1;Target=comp163639_c4_seq1 3019 3563 +
Chr1	stalkie_big_nohaplotig	CDS	41030248	41030440	.	+	2	Parent=comp163639_c4_seq1.mrna1;Target=comp163639_c4_seq1 3564 3756 +
Chr1	stalkie_big_nohaplotig	CDS	41030537	41036910	.	+	1	Parent=comp163639_c4_seq1.mrna1;Target=comp163639_c4_seq1 3757 10136 +
Chr1	stalkie_big_nohaplotig	CDS	41038101	41038193	.	+	2	Parent=comp163639_c4_seq1.mrna1;Target=comp163639_c4_seq1 10137 10229 +
Chr1	stalkie_big_nohaplotig	CDS	41038473	41038591	.	+	2	Parent=comp163639_c4_seq1.mrna1;Target=comp163639_c4_seq1 10230 10348 +
Chr1	stalkie_big_nohaplotig	mRNA	41026201	41038588	.	+	.	ID=FBgn0036398.1.mrna1;geneID=FBgn0036398.1.path1;Name=FBgn0036398.1;Dir=sensecoverage=100.0;identity=99.8;matches=9180;mismatches=15;indels=6;unknowns=0;locus=RLOC_00007400
Chr1	stalkie_big_nohaplotig	exon	41026201	41026371	100	+	.	Parent=FBgn0036398.1.mrna1;Target=FBgn0036398.1 1 171 +
Chr1	stalkie_big_nohaplotig	exon	41026435	41028137	99	+	.	Parent=FBgn0036398.1.mrna1;Target=FBgn0036398.1 172 1874 +
Chr1	stalkie_big_nohaplotig	exon	41029602	41030146	100	+	.	Parent=FBgn0036398.1.mrna1;Target=FBgn0036398.1 1875 2419 +
Chr1	stalkie_big_nohaplotig	exon	41030248	41030440	100	+	.	Parent=FBgn0036398.1.mrna1;Target=FBgn0036398.1 2420 2612 +
Chr1	stalkie_big_nohaplotig	exon	41030537	41036910	99	+	.	Parent=FBgn0036398.1.mrna1;Target=FBgn0036398.1 2613 8992 +
Chr1	stalkie_big_nohaplotig	exon	41038101	41038193	100	+	.	Parent=FBgn0036398.1.mrna1;Target=FBgn0036398.1 8993 9085 +
Chr1	stalkie_big_nohaplotig	exon	41038473	41038588	99	+	.	Parent=FBgn0036398.1.mrna1;Target=FBgn0036398.1 9086 9201 +
Chr1	stalkie_big_nohaplotig	CDS	41026201	41026371	.	+	0	Parent=FBgn0036398.1.mrna1;Target=FBgn0036398.1 1 171 +
Chr1	stalkie_big_nohaplotig	CDS	41026435	41028137	.	+	0	Parent=FBgn0036398.1.mrna1;Target=FBgn0036398.1 172 1874 +
Chr1	stalkie_big_nohaplotig	CDS	41029602	41030146	.	+	1	Parent=FBgn0036398.1.mrna1;Target=FBgn0036398.1 1875 2419 +
Chr1	stalkie_big_nohaplotig	CDS	41030248	41030440	.	+	2	Parent=FBgn0036398.1.mrna1;Target=FBgn0036398.1 2420 2612 +
Chr1	stalkie_big_nohaplotig	CDS	41030537	41036910	.	+	1	Parent=FBgn0036398.1.mrna1;Target=FBgn0036398.1 2613 8992 +
Chr1	stalkie_big_nohaplotig	CDS	41038101	41038193	.	+	2	Parent=FBgn0036398.1.mrna1;Target=FBgn0036398.1 8993 9085 +
Chr1	stalkie_big_nohaplotig	CDS	41038473	41038588	.	+	2	Parent=FBgn0036398.1.mrna1;Target=FBgn0036398.1 9086 9201 +
Chr1	gffcl	locus	41040479	41041086	.	-	.	ID=RLOC_00007401;geneIDs=comp157360_c1_seq1.path1;transcripts=comp157360_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41040479	41041086	.	-	.	ID=comp157360_c1_seq1.mrna1;geneID=comp157360_c1_seq1.path1;Name=comp157360_c1_seq1;Dir=indeterminatecoverage=72.4;identity=97.2;matches=595;mismatches=11;indels=6;unknowns=0;Target=comp157360_c1_seq1 610 1 .;CDS_Target=comp157360_c1_seq1 607 491 .;locus=RLOC_00007401
Chr1	stalkie_big_nohaplotig	exon	41040479	41041086	97	-	.	Parent=comp157360_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	41040482	41040596	.	-	0	Parent=comp157360_c1_seq1.mrna1
Chr1	gffcl	locus	41042344	41043644	.	+	.	ID=RLOC_00007402;geneIDs=comp157142_c0_seq1.path1;transcripts=comp157142_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41042344	41043644	.	+	.	ID=comp157142_c0_seq1.mrna1;geneID=comp157142_c0_seq1.path1;Name=comp157142_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1292;mismatches=8;indels=1;unknowns=0;Target=comp157142_c0_seq1 1300 1 .;CDS_Target=comp157142_c0_seq1 306 118 .;locus=RLOC_00007402
Chr1	stalkie_big_nohaplotig	exon	41042344	41043644	99	+	.	Parent=comp157142_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	41042461	41042649	.	+	0	Parent=comp157142_c0_seq1.mrna1
Chr1	gffcl	locus	41073457	41091284	.	+	.	ID=RLOC_00007403;geneIDs=FBgn0036391.1.path1,comp159687_c0_seq1.path1;transcripts=comp159687_c0_seq1.mrna1,FBgn0036391.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41073457	41091284	.	+	.	ID=comp159687_c0_seq1.mrna1;geneID=comp159687_c0_seq1.path1;Name=comp159687_c0_seq1;Dir=antisensecoverage=92.1;identity=99.7;matches=2493;mismatches=7;indels=0;unknowns=0;locus=RLOC_00007403
Chr1	stalkie_big_nohaplotig	exon	41073457	41074583	99	+	.	Parent=comp159687_c0_seq1.mrna1;Target=comp159687_c0_seq1 1374 2500 -
Chr1	stalkie_big_nohaplotig	exon	41081096	41081242	100	+	.	Parent=comp159687_c0_seq1.mrna1;Target=comp159687_c0_seq1 1227 1373 -
Chr1	stalkie_big_nohaplotig	exon	41081359	41081520	100	+	.	Parent=comp159687_c0_seq1.mrna1;Target=comp159687_c0_seq1 1065 1226 -
Chr1	stalkie_big_nohaplotig	exon	41081651	41081827	100	+	.	Parent=comp159687_c0_seq1.mrna1;Target=comp159687_c0_seq1 888 1064 -
Chr1	stalkie_big_nohaplotig	exon	41083707	41083859	100	+	.	Parent=comp159687_c0_seq1.mrna1;Target=comp159687_c0_seq1 735 887 -
Chr1	stalkie_big_nohaplotig	exon	41089587	41089882	100	+	.	Parent=comp159687_c0_seq1.mrna1;Target=comp159687_c0_seq1 439 734 -
Chr1	stalkie_big_nohaplotig	exon	41090847	41091284	99	+	.	Parent=comp159687_c0_seq1.mrna1;Target=comp159687_c0_seq1 1 438 -
Chr1	stalkie_big_nohaplotig	CDS	41073884	41074583	.	+	0	Parent=comp159687_c0_seq1.mrna1;Target=comp159687_c0_seq1 1374 2073 .
Chr1	stalkie_big_nohaplotig	CDS	41081096	41081242	.	+	2	Parent=comp159687_c0_seq1.mrna1;Target=comp159687_c0_seq1 1227 1373 .
Chr1	stalkie_big_nohaplotig	CDS	41081359	41081520	.	+	2	Parent=comp159687_c0_seq1.mrna1;Target=comp159687_c0_seq1 1065 1226 .
Chr1	stalkie_big_nohaplotig	CDS	41081651	41081827	.	+	2	Parent=comp159687_c0_seq1.mrna1;Target=comp159687_c0_seq1 888 1064 .
Chr1	stalkie_big_nohaplotig	CDS	41083707	41083859	.	+	2	Parent=comp159687_c0_seq1.mrna1;Target=comp159687_c0_seq1 735 887 .
Chr1	stalkie_big_nohaplotig	CDS	41089587	41089882	.	+	2	Parent=comp159687_c0_seq1.mrna1;Target=comp159687_c0_seq1 439 734 .
Chr1	stalkie_big_nohaplotig	CDS	41090847	41091077	.	+	0	Parent=comp159687_c0_seq1.mrna1;Target=comp159687_c0_seq1 208 438 .
Chr1	stalkie_big_nohaplotig	mRNA	41073881	41084302	.	+	.	ID=FBgn0036391.1.mrna1;geneID=FBgn0036391.1.path1;Name=FBgn0036391.1;Dir=sensecoverage=100.0;identity=99.7;matches=1780;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007403
Chr1	stalkie_big_nohaplotig	exon	41073881	41074583	99	+	.	Parent=FBgn0036391.1.mrna1;Target=FBgn0036391.1 1 703 +
Chr1	stalkie_big_nohaplotig	exon	41081096	41081242	100	+	.	Parent=FBgn0036391.1.mrna1;Target=FBgn0036391.1 704 850 +
Chr1	stalkie_big_nohaplotig	exon	41081359	41081520	100	+	.	Parent=FBgn0036391.1.mrna1;Target=FBgn0036391.1 851 1012 +
Chr1	stalkie_big_nohaplotig	exon	41081651	41081827	100	+	.	Parent=FBgn0036391.1.mrna1;Target=FBgn0036391.1 1013 1189 +
Chr1	stalkie_big_nohaplotig	exon	41083707	41084302	99	+	.	Parent=FBgn0036391.1.mrna1;Target=FBgn0036391.1 1190 1785 +
Chr1	stalkie_big_nohaplotig	CDS	41073881	41074583	.	+	0	Parent=FBgn0036391.1.mrna1;Target=FBgn0036391.1 1 703 +
Chr1	stalkie_big_nohaplotig	CDS	41081096	41081242	.	+	2	Parent=FBgn0036391.1.mrna1;Target=FBgn0036391.1 704 850 +
Chr1	stalkie_big_nohaplotig	CDS	41081359	41081520	.	+	2	Parent=FBgn0036391.1.mrna1;Target=FBgn0036391.1 851 1012 +
Chr1	stalkie_big_nohaplotig	CDS	41081651	41081827	.	+	2	Parent=FBgn0036391.1.mrna1;Target=FBgn0036391.1 1013 1189 +
Chr1	stalkie_big_nohaplotig	CDS	41083707	41084302	.	+	2	Parent=FBgn0036391.1.mrna1;Target=FBgn0036391.1 1190 1785 +
Chr1	gffcl	locus	41093839	41096111	.	+	.	ID=RLOC_00007404;geneIDs=comp163408_c0_seq1.path1;transcripts=comp163408_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41093839	41096111	.	+	.	ID=comp163408_c0_seq1.mrna1;geneID=comp163408_c0_seq1.path1;Name=comp163408_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.2;matches=2213;mismatches=51;indels=36;unknowns=0;Target=comp163408_c0_seq1 2291 1 .;CDS_Target=comp163408_c0_seq1 1809 1687 .;locus=RLOC_00007404
Chr1	stalkie_big_nohaplotig	exon	41093839	41096111	96	+	.	Parent=comp163408_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	41095507	41095629	.	+	0	Parent=comp163408_c0_seq1.mrna1
Chr1	gffcl	locus	41096817	41104479	.	-	.	ID=RLOC_00007405;geneIDs=FBgn0001216.1.path1;transcripts=FBgn0001216.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41096817	41104479	.	-	.	ID=FBgn0001216.1.mrna1;geneID=FBgn0001216.1.path1;Name=FBgn0001216.1;Dir=sensecoverage=99.9;identity=99.5;matches=1954;mismatches=7;indels=3;unknowns=0;locus=RLOC_00007405
Chr1	stalkie_big_nohaplotig	exon	41096817	41098531	99	-	.	Parent=FBgn0001216.1.mrna1;Target=FBgn0001216.1 248 1962 +
Chr1	stalkie_big_nohaplotig	exon	41104231	41104479	98	-	.	Parent=FBgn0001216.1.mrna1;Target=FBgn0001216.1 2 247 +
Chr1	stalkie_big_nohaplotig	CDS	41096817	41098531	.	-	2	Parent=FBgn0001216.1.mrna1;Target=FBgn0001216.1 248 1962 +
Chr1	stalkie_big_nohaplotig	CDS	41104231	41104477	.	-	0	Parent=FBgn0001216.1.mrna1;Target=FBgn0001216.1 4 247 +
Chr1	gffcl	locus	41106108	41108848	.	+	.	ID=RLOC_00007406;geneIDs=FBgn0036133.1.path1;transcripts=FBgn0036133.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41106108	41108848	.	+	.	ID=FBgn0036133.1.mrna1;geneID=FBgn0036133.1.path1;Name=FBgn0036133.1;Dir=sensecoverage=100.0;identity=99.5;matches=1534;mismatches=8;indels=0;unknowns=0;locus=RLOC_00007406
Chr1	stalkie_big_nohaplotig	exon	41106108	41106122	100	+	.	Parent=FBgn0036133.1.mrna1;Target=FBgn0036133.1 1 15 +
Chr1	stalkie_big_nohaplotig	exon	41106304	41106678	99	+	.	Parent=FBgn0036133.1.mrna1;Target=FBgn0036133.1 16 390 +
Chr1	stalkie_big_nohaplotig	exon	41106739	41106818	98	+	.	Parent=FBgn0036133.1.mrna1;Target=FBgn0036133.1 391 470 +
Chr1	stalkie_big_nohaplotig	exon	41107537	41107752	100	+	.	Parent=FBgn0036133.1.mrna1;Target=FBgn0036133.1 471 686 +
Chr1	stalkie_big_nohaplotig	exon	41107810	41108067	99	+	.	Parent=FBgn0036133.1.mrna1;Target=FBgn0036133.1 687 944 +
Chr1	stalkie_big_nohaplotig	exon	41108134	41108308	98	+	.	Parent=FBgn0036133.1.mrna1;Target=FBgn0036133.1 945 1119 +
Chr1	stalkie_big_nohaplotig	exon	41108366	41108671	99	+	.	Parent=FBgn0036133.1.mrna1;Target=FBgn0036133.1 1120 1425 +
Chr1	stalkie_big_nohaplotig	exon	41108732	41108848	99	+	.	Parent=FBgn0036133.1.mrna1;Target=FBgn0036133.1 1426 1542 +
Chr1	stalkie_big_nohaplotig	CDS	41106108	41106122	.	+	0	Parent=FBgn0036133.1.mrna1;Target=FBgn0036133.1 1 15 +
Chr1	stalkie_big_nohaplotig	CDS	41106304	41106678	.	+	0	Parent=FBgn0036133.1.mrna1;Target=FBgn0036133.1 16 390 +
Chr1	stalkie_big_nohaplotig	CDS	41106739	41106818	.	+	0	Parent=FBgn0036133.1.mrna1;Target=FBgn0036133.1 391 470 +
Chr1	stalkie_big_nohaplotig	CDS	41107537	41107752	.	+	1	Parent=FBgn0036133.1.mrna1;Target=FBgn0036133.1 471 686 +
Chr1	stalkie_big_nohaplotig	CDS	41107810	41108067	.	+	1	Parent=FBgn0036133.1.mrna1;Target=FBgn0036133.1 687 944 +
Chr1	stalkie_big_nohaplotig	CDS	41108134	41108308	.	+	1	Parent=FBgn0036133.1.mrna1;Target=FBgn0036133.1 945 1119 +
Chr1	stalkie_big_nohaplotig	CDS	41108366	41108671	.	+	0	Parent=FBgn0036133.1.mrna1;Target=FBgn0036133.1 1120 1425 +
Chr1	stalkie_big_nohaplotig	CDS	41108732	41108848	.	+	0	Parent=FBgn0036133.1.mrna1;Target=FBgn0036133.1 1426 1542 +
Chr1	gffcl	locus	41109130	41112636	.	-	.	ID=RLOC_00007407;geneIDs=FBgn0011771.1.path1;transcripts=FBgn0011771.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41109130	41112636	.	-	.	ID=FBgn0011771.1.mrna1;geneID=FBgn0011771.1.path1;Name=FBgn0011771.1;Dir=sensecoverage=100.0;identity=99.4;matches=3373;mismatches=20;indels=0;unknowns=0;locus=RLOC_00007407
Chr1	stalkie_big_nohaplotig	exon	41109130	41110129	99	-	.	Parent=FBgn0011771.1.mrna1;Target=FBgn0011771.1 2394 3393 +
Chr1	stalkie_big_nohaplotig	exon	41110186	41111374	99	-	.	Parent=FBgn0011771.1.mrna1;Target=FBgn0011771.1 1205 2393 +
Chr1	stalkie_big_nohaplotig	exon	41111433	41112636	99	-	.	Parent=FBgn0011771.1.mrna1;Target=FBgn0011771.1 1 1204 +
Chr1	stalkie_big_nohaplotig	CDS	41109130	41110129	.	-	1	Parent=FBgn0011771.1.mrna1;Target=FBgn0011771.1 2394 3393 +
Chr1	stalkie_big_nohaplotig	CDS	41110186	41111374	.	-	2	Parent=FBgn0011771.1.mrna1;Target=FBgn0011771.1 1205 2393 +
Chr1	stalkie_big_nohaplotig	CDS	41111433	41112636	.	-	0	Parent=FBgn0011771.1.mrna1;Target=FBgn0011771.1 1 1204 +
Chr1	gffcl	locus	41135304	41136243	.	-	.	ID=RLOC_00007408;geneIDs=comp155424_c0_seq1.path1;transcripts=comp155424_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41135304	41136243	.	-	.	ID=comp155424_c0_seq1.mrna1;geneID=comp155424_c0_seq1.path1;Name=comp155424_c0_seq1;Dir=antisensecoverage=99.9;identity=99.0;matches=805;mismatches=8;indels=0;unknowns=0;locus=RLOC_00007408
Chr1	stalkie_big_nohaplotig	exon	41135304	41135970	99	-	.	Parent=comp155424_c0_seq1.mrna1;Target=comp155424_c0_seq1 2 668 -
Chr1	stalkie_big_nohaplotig	exon	41136098	41136243	97	-	.	Parent=comp155424_c0_seq1.mrna1;Target=comp155424_c0_seq1 669 814 -
Chr1	stalkie_big_nohaplotig	CDS	41135456	41135970	.	-	2	Parent=comp155424_c0_seq1.mrna1;Target=comp155424_c0_seq1 154 668 .
Chr1	stalkie_big_nohaplotig	CDS	41136098	41136125	.	-	0	Parent=comp155424_c0_seq1.mrna1;Target=comp155424_c0_seq1 669 696 .
Chr1	gffcl	locus	41143690	41150544	.	+	.	ID=RLOC_00007409;geneIDs=FBgn0036451.1.path1;transcripts=FBgn0036451.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41143690	41150544	.	+	.	ID=FBgn0036451.1.mrna1;geneID=FBgn0036451.1.path1;Name=FBgn0036451.1;Dir=sensecoverage=100.0;identity=99.8;matches=6469;mismatches=14;indels=0;unknowns=0;locus=RLOC_00007409
Chr1	stalkie_big_nohaplotig	exon	41143690	41144037	99	+	.	Parent=FBgn0036451.1.mrna1;Target=FBgn0036451.1 1 348 +
Chr1	stalkie_big_nohaplotig	exon	41144127	41144631	99	+	.	Parent=FBgn0036451.1.mrna1;Target=FBgn0036451.1 349 853 +
Chr1	stalkie_big_nohaplotig	exon	41144754	41146594	99	+	.	Parent=FBgn0036451.1.mrna1;Target=FBgn0036451.1 854 2694 +
Chr1	stalkie_big_nohaplotig	exon	41146659	41149680	99	+	.	Parent=FBgn0036451.1.mrna1;Target=FBgn0036451.1 2695 5716 +
Chr1	stalkie_big_nohaplotig	exon	41149778	41150544	99	+	.	Parent=FBgn0036451.1.mrna1;Target=FBgn0036451.1 5717 6483 +
Chr1	stalkie_big_nohaplotig	CDS	41143690	41144037	.	+	0	Parent=FBgn0036451.1.mrna1;Target=FBgn0036451.1 1 348 +
Chr1	stalkie_big_nohaplotig	CDS	41144127	41144631	.	+	0	Parent=FBgn0036451.1.mrna1;Target=FBgn0036451.1 349 853 +
Chr1	stalkie_big_nohaplotig	CDS	41144754	41146594	.	+	2	Parent=FBgn0036451.1.mrna1;Target=FBgn0036451.1 854 2694 +
Chr1	stalkie_big_nohaplotig	CDS	41146659	41149680	.	+	0	Parent=FBgn0036451.1.mrna1;Target=FBgn0036451.1 2695 5716 +
Chr1	stalkie_big_nohaplotig	CDS	41149778	41150544	.	+	2	Parent=FBgn0036451.1.mrna1;Target=FBgn0036451.1 5717 6483 +
Chr1	gffcl	locus	41156052	41156606	.	-	.	ID=RLOC_00007410;geneIDs=FBgn0029148.1.path1;transcripts=FBgn0029148.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41156052	41156606	.	-	.	ID=FBgn0029148.1.mrna1;geneID=FBgn0029148.1.path1;Name=FBgn0029148.1;Dir=sensecoverage=100.0;identity=99.2;matches=488;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007410
Chr1	stalkie_big_nohaplotig	exon	41156052	41156280	98	-	.	Parent=FBgn0029148.1.mrna1;Target=FBgn0029148.1 264 492 +
Chr1	stalkie_big_nohaplotig	exon	41156344	41156606	99	-	.	Parent=FBgn0029148.1.mrna1;Target=FBgn0029148.1 1 263 +
Chr1	stalkie_big_nohaplotig	CDS	41156052	41156280	.	-	1	Parent=FBgn0029148.1.mrna1;Target=FBgn0029148.1 264 492 +
Chr1	stalkie_big_nohaplotig	CDS	41156344	41156606	.	-	0	Parent=FBgn0029148.1.mrna1;Target=FBgn0029148.1 1 263 +
Chr1	gffcl	locus	41158974	41168254	.	+	.	ID=RLOC_00007411;geneIDs=FBgn0004179.path1;transcripts=FBgn0004179.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41158974	41168254	.	+	.	ID=FBgn0004179.mrna1;geneID=FBgn0004179.path1;Name=FBgn0004179;Dir=sensecoverage=100.0;identity=99.2;matches=390;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007411
Chr1	stalkie_big_nohaplotig	exon	41158974	41159008	100	+	.	Parent=FBgn0004179.mrna1;Target=FBgn0004179 1 35 +
Chr1	stalkie_big_nohaplotig	exon	41167745	41167883	100	+	.	Parent=FBgn0004179.mrna1;Target=FBgn0004179 36 174 +
Chr1	stalkie_big_nohaplotig	exon	41167962	41168114	100	+	.	Parent=FBgn0004179.mrna1;Target=FBgn0004179 175 327 +
Chr1	stalkie_big_nohaplotig	exon	41168189	41168254	95	+	.	Parent=FBgn0004179.mrna1;Target=FBgn0004179 328 393 +
Chr1	stalkie_big_nohaplotig	CDS	41158974	41159008	.	+	0	Parent=FBgn0004179.mrna1;Target=FBgn0004179 1 35 +
Chr1	stalkie_big_nohaplotig	CDS	41167745	41167883	.	+	1	Parent=FBgn0004179.mrna1;Target=FBgn0004179 36 174 +
Chr1	stalkie_big_nohaplotig	CDS	41167962	41168114	.	+	0	Parent=FBgn0004179.mrna1;Target=FBgn0004179 175 327 +
Chr1	stalkie_big_nohaplotig	CDS	41168189	41168254	.	+	0	Parent=FBgn0004179.mrna1;Target=FBgn0004179 328 393 +
Chr1	gffcl	locus	41173701	41174014	.	-	.	ID=RLOC_00007412;geneIDs=comp141595_c0_seq1.path1;transcripts=comp141595_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41173701	41174014	.	-	.	ID=comp141595_c0_seq1.mrna1;geneID=comp141595_c0_seq1.path1;Name=comp141595_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=313;mismatches=1;indels=0;unknowns=0;Target=comp141595_c0_seq1 314 1 .;CDS_Target=comp141595_c0_seq1 146 90 .;locus=RLOC_00007412
Chr1	stalkie_big_nohaplotig	exon	41173701	41174014	99	-	.	Parent=comp141595_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	41173869	41173925	.	-	0	Parent=comp141595_c0_seq1.mrna1
Chr1	gffcl	locus	41180009	41180062	.	-	.	ID=RLOC_00007413;geneIDs=FBgn0036454.1.path1;transcripts=FBgn0036454.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41180009	41180062	.	-	.	ID=FBgn0036454.1.mrna1;geneID=FBgn0036454.1.path1;Name=FBgn0036454.1;Dir=indeterminatecoverage=1.2;identity=100.0;matches=54;mismatches=0;indels=0;unknowns=0;Target=FBgn0036454.1 54 1 .;locus=RLOC_00007413
Chr1	stalkie_big_nohaplotig	exon	41180009	41180062	100	-	.	Parent=FBgn0036454.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	41180009	41180062	.	-	0	Parent=FBgn0036454.1.mrna1
Chr1	gffcl	locus	41245651	41249359	.	.	.	ID=RLOC_00007414;geneIDs=comp151664_c0_seq1.path1,comp163627_c0_seq1.path2;transcripts=comp151664_c0_seq1.mrna1,comp163627_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	41245651	41246071	.	-	.	ID=comp151664_c0_seq1.mrna1;geneID=comp151664_c0_seq1.path1;Name=comp151664_c0_seq1;Dir=indeterminatecoverage=96.6;identity=95.3;matches=404;mismatches=17;indels=3;unknowns=0;Target=comp151664_c0_seq1 424 1 .;CDS_Target=comp151664_c0_seq1 110 75 .;locus=RLOC_00007414
Chr1	stalkie_big_nohaplotig	exon	41245651	41246071	95	-	.	Parent=comp151664_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	41245964	41245997	.	-	0	Parent=comp151664_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41245889	41249359	.	+	.	ID=comp163627_c0_seq1.mrna2;geneID=comp163627_c0_seq1.path2;Name=comp163627_c0_seq1;Dir=indeterminatecoverage=15.2;identity=98.4;matches=491;mismatches=6;indels=2;unknowns=0;locus=RLOC_00007414
Chr1	stalkie_big_nohaplotig	exon	41245889	41245895	100	+	.	Parent=comp163627_c0_seq1.mrna2;Target=comp163627_c0_seq1 2781 2775 .
Chr1	stalkie_big_nohaplotig	exon	41246448	41246454	100	+	.	Parent=comp163627_c0_seq1.mrna2;Target=comp163627_c0_seq1 2788 2782 .
Chr1	stalkie_big_nohaplotig	exon	41246631	41246632	100	+	.	Parent=comp163627_c0_seq1.mrna2;Target=comp163627_c0_seq1 2790 2789 .
Chr1	stalkie_big_nohaplotig	exon	41248877	41249359	98	+	.	Parent=comp163627_c0_seq1.mrna2;Target=comp163627_c0_seq1 3271 2791 .
Chr1	gffcl	locus	41246879	41247536	.	-	.	ID=RLOC_00007415;geneIDs=comp158261_c0_seq1.path1;transcripts=comp158261_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41246879	41247536	.	-	.	ID=comp158261_c0_seq1.mrna1;geneID=comp158261_c0_seq1.path1;Name=comp158261_c0_seq1;Dir=indeterminatecoverage=91.2;identity=96.7;matches=636;mismatches=21;indels=1;unknowns=0;Target=comp158261_c0_seq1 701 45 .;CDS_Target=comp158261_c0_seq1 570 538 .;locus=RLOC_00007415
Chr1	stalkie_big_nohaplotig	exon	41246879	41247536	96	-	.	Parent=comp158261_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	41247010	41247042	.	-	0	Parent=comp158261_c0_seq1.mrna1
Chr1	gffcl	locus	41252962	41264064	.	-	.	ID=RLOC_00007416;geneIDs=FBgn0025702.1.path1;transcripts=FBgn0025702.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41252962	41264064	.	-	.	ID=FBgn0025702.1.mrna1;geneID=FBgn0025702.1.path1;Name=FBgn0025702.1;Dir=sensecoverage=100.0;identity=99.5;matches=2594;mismatches=13;indels=0;unknowns=0;locus=RLOC_00007416
Chr1	stalkie_big_nohaplotig	exon	41252962	41253155	100	-	.	Parent=FBgn0025702.1.mrna1;Target=FBgn0025702.1 2414 2607 +
Chr1	stalkie_big_nohaplotig	exon	41253221	41253491	99	-	.	Parent=FBgn0025702.1.mrna1;Target=FBgn0025702.1 2143 2413 +
Chr1	stalkie_big_nohaplotig	exon	41257215	41257364	99	-	.	Parent=FBgn0025702.1.mrna1;Target=FBgn0025702.1 1993 2142 +
Chr1	stalkie_big_nohaplotig	exon	41258006	41258200	100	-	.	Parent=FBgn0025702.1.mrna1;Target=FBgn0025702.1 1798 1992 +
Chr1	stalkie_big_nohaplotig	exon	41260056	41260387	100	-	.	Parent=FBgn0025702.1.mrna1;Target=FBgn0025702.1 1466 1797 +
Chr1	stalkie_big_nohaplotig	exon	41260692	41261143	99	-	.	Parent=FBgn0025702.1.mrna1;Target=FBgn0025702.1 1014 1465 +
Chr1	stalkie_big_nohaplotig	exon	41261206	41261427	100	-	.	Parent=FBgn0025702.1.mrna1;Target=FBgn0025702.1 792 1013 +
Chr1	stalkie_big_nohaplotig	exon	41263274	41264064	98	-	.	Parent=FBgn0025702.1.mrna1;Target=FBgn0025702.1 1 791 +
Chr1	stalkie_big_nohaplotig	CDS	41252962	41253155	.	-	2	Parent=FBgn0025702.1.mrna1;Target=FBgn0025702.1 2414 2607 +
Chr1	stalkie_big_nohaplotig	CDS	41253221	41253491	.	-	0	Parent=FBgn0025702.1.mrna1;Target=FBgn0025702.1 2143 2413 +
Chr1	stalkie_big_nohaplotig	CDS	41257215	41257364	.	-	0	Parent=FBgn0025702.1.mrna1;Target=FBgn0025702.1 1993 2142 +
Chr1	stalkie_big_nohaplotig	CDS	41258006	41258200	.	-	0	Parent=FBgn0025702.1.mrna1;Target=FBgn0025702.1 1798 1992 +
Chr1	stalkie_big_nohaplotig	CDS	41260056	41260387	.	-	2	Parent=FBgn0025702.1.mrna1;Target=FBgn0025702.1 1466 1797 +
Chr1	stalkie_big_nohaplotig	CDS	41260692	41261143	.	-	1	Parent=FBgn0025702.1.mrna1;Target=FBgn0025702.1 1014 1465 +
Chr1	stalkie_big_nohaplotig	CDS	41261206	41261427	.	-	1	Parent=FBgn0025702.1.mrna1;Target=FBgn0025702.1 792 1013 +
Chr1	stalkie_big_nohaplotig	CDS	41263274	41264064	.	-	0	Parent=FBgn0025702.1.mrna1;Target=FBgn0025702.1 1 791 +
Chr1	gffcl	locus	41253468	41274559	.	+	.	ID=RLOC_00007417;geneIDs=comp161939_c0_seq1.path1;transcripts=comp161939_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41253468	41274559	.	+	.	ID=comp161939_c0_seq1.mrna1;geneID=comp161939_c0_seq1.path1;Name=comp161939_c0_seq1;Dir=sensecoverage=100.0;identity=92.9;matches=1212;mismatches=46;indels=46;unknowns=0;Target=comp161939_c0_seq1 456 530 +;locus=RLOC_00007417
Chr1	stalkie_big_nohaplotig	exon	41253468	41254125	95	+	.	Parent=comp161939_c0_seq1.mrna1;Target=comp161939_c0_seq1 1 651 +
Chr1	stalkie_big_nohaplotig	exon	41273916	41274559	90	+	.	Parent=comp161939_c0_seq1.mrna1;Target=comp161939_c0_seq1 652 1260 +
Chr1	stalkie_big_nohaplotig	CDS	41253921	41253995	.	+	0	Parent=comp161939_c0_seq1.mrna1
Chr1	gffcl	locus	41264186	41264754	.	-	.	ID=RLOC_00007418;geneIDs=comp135675_c0_seq1.path1;transcripts=comp135675_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41264186	41264754	.	-	.	ID=comp135675_c0_seq1.mrna1;geneID=comp135675_c0_seq1.path1;Name=comp135675_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=569;mismatches=0;indels=0;unknowns=0;Target=comp135675_c0_seq1 569 1 .;CDS_Target=comp135675_c0_seq1 331 167 .;locus=RLOC_00007418
Chr1	stalkie_big_nohaplotig	exon	41264186	41264754	100	-	.	Parent=comp135675_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	41264424	41264588	.	-	0	Parent=comp135675_c0_seq1.mrna1
Chr1	gffcl	locus	41317633	41320670	.	-	.	ID=RLOC_00007419;geneIDs=comp144149_c0_seq1.path1;transcripts=comp144149_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41317633	41320670	.	-	.	ID=comp144149_c0_seq1.mrna1;geneID=comp144149_c0_seq1.path1;Name=comp144149_c0_seq1;Dir=sensecoverage=98.7;identity=98.1;matches=765;mismatches=13;indels=2;unknowns=0;locus=RLOC_00007419
Chr1	stalkie_big_nohaplotig	exon	41317633	41317813	97	-	.	Parent=comp144149_c0_seq1.mrna1;Target=comp144149_c0_seq1 610 790 +
Chr1	stalkie_big_nohaplotig	exon	41317878	41318031	99	-	.	Parent=comp144149_c0_seq1.mrna1;Target=comp144149_c0_seq1 456 609 +
Chr1	stalkie_big_nohaplotig	exon	41320228	41320670	97	-	.	Parent=comp144149_c0_seq1.mrna1;Target=comp144149_c0_seq1 11 455 +
Chr1	stalkie_big_nohaplotig	CDS	41317927	41318031	.	-	0	Parent=comp144149_c0_seq1.mrna1;Target=comp144149_c0_seq1 456 560 +
Chr1	stalkie_big_nohaplotig	CDS	41320228	41320461	.	-	0	Parent=comp144149_c0_seq1.mrna1;Target=comp144149_c0_seq1 222 455 +
Chr1	gffcl	locus	41322468	41323017	.	+	.	ID=RLOC_00007420;geneIDs=comp166227_c0_seq1.path1;transcripts=comp166227_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41322468	41323017	.	+	.	ID=comp166227_c0_seq1.mrna1;geneID=comp166227_c0_seq1.path1;Name=comp166227_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=494;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007420
Chr1	stalkie_big_nohaplotig	exon	41322468	41322654	100	+	.	Parent=comp166227_c0_seq1.mrna1;Target=comp166227_c0_seq1 1 187 +
Chr1	stalkie_big_nohaplotig	exon	41322711	41323017	100	+	.	Parent=comp166227_c0_seq1.mrna1;Target=comp166227_c0_seq1 188 494 +
Chr1	stalkie_big_nohaplotig	CDS	41322630	41322654	.	+	0	Parent=comp166227_c0_seq1.mrna1;Target=comp166227_c0_seq1 163 187 +
Chr1	stalkie_big_nohaplotig	CDS	41322711	41322949	.	+	2	Parent=comp166227_c0_seq1.mrna1;Target=comp166227_c0_seq1 188 426 +
Chr1	gffcl	locus	41338042	41339490	.	+	.	ID=RLOC_00007422;geneIDs=FBgn0259791.1.path1;transcripts=FBgn0259791.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41338042	41339490	.	+	.	ID=FBgn0259791.1.mrna1;geneID=FBgn0259791.1.path1;Name=FBgn0259791.1;Dir=sensecoverage=100.0;identity=99.5;matches=1382;mismatches=6;indels=1;unknowns=0;locus=RLOC_00007422
Chr1	stalkie_big_nohaplotig	exon	41338042	41338358	98	+	.	Parent=FBgn0259791.1.mrna1;Target=FBgn0259791.1 1 317 +
Chr1	stalkie_big_nohaplotig	exon	41338420	41339490	99	+	.	Parent=FBgn0259791.1.mrna1;Target=FBgn0259791.1 318 1389 +
Chr1	stalkie_big_nohaplotig	CDS	41338042	41338358	.	+	0	Parent=FBgn0259791.1.mrna1;Target=FBgn0259791.1 1 317 +
Chr1	stalkie_big_nohaplotig	CDS	41338420	41339490	.	+	1	Parent=FBgn0259791.1.mrna1;Target=FBgn0259791.1 318 1389 +
Chr1	gffcl	locus	41341456	41342552	.	+	.	ID=RLOC_00007423;geneIDs=comp152245_c0_seq1.path1;transcripts=comp152245_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41341456	41342552	.	+	.	ID=comp152245_c0_seq1.mrna1;geneID=comp152245_c0_seq1.path1;Name=comp152245_c0_seq1;Dir=sensecoverage=100.0;identity=89.1;matches=952;mismatches=8;indels=109;unknowns=0;Target=comp152245_c0_seq1 447 662 +;locus=RLOC_00007423
Chr1	stalkie_big_nohaplotig	exon	41341456	41341694	81	+	.	Parent=comp152245_c0_seq1.mrna1;Target=comp152245_c0_seq1 1 286 +
Chr1	stalkie_big_nohaplotig	exon	41341774	41342552	91	+	.	Parent=comp152245_c0_seq1.mrna1;Target=comp152245_c0_seq1 287 1011 +
Chr1	stalkie_big_nohaplotig	CDS	41341988	41342203	.	+	0	Parent=comp152245_c0_seq1.mrna1
Chr1	gffcl	locus	41353317	41354623	.	+	.	ID=RLOC_00007424;geneIDs=comp152912_c0_seq1.path1;transcripts=comp152912_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41353317	41354623	.	+	.	ID=comp152912_c0_seq1.mrna1;geneID=comp152912_c0_seq1.path1;Name=comp152912_c0_seq1;Dir=indeterminatecoverage=94.0;identity=98.0;matches=1013;mismatches=14;indels=7;unknowns=0;Target=comp152912_c0_seq1 930 811 .;locus=RLOC_00007424
Chr1	stalkie_big_nohaplotig	exon	41353317	41353657	97	+	.	Parent=comp152912_c0_seq1.mrna1;Target=comp152912_c0_seq1 341 1 .
Chr1	stalkie_big_nohaplotig	exon	41353931	41354623	97	+	.	Parent=comp152912_c0_seq1.mrna1;Target=comp152912_c0_seq1 1027 342 .
Chr1	stalkie_big_nohaplotig	CDS	41354407	41354526	.	+	0	Parent=comp152912_c0_seq1.mrna1
Chr1	gffcl	locus	41373191	41381344	.	-	.	ID=RLOC_00007425;geneIDs=comp116487_c0_seq1.path1;transcripts=comp116487_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41373191	41381344	.	-	.	ID=comp116487_c0_seq1.mrna1;geneID=comp116487_c0_seq1.path1;Name=comp116487_c0_seq1;Dir=antisensecoverage=99.8;identity=99.0;matches=992;mismatches=3;indels=7;unknowns=0;Target=comp116487_c0_seq1 225 446 .;locus=RLOC_00007425
Chr1	stalkie_big_nohaplotig	exon	41373191	41373773	98	-	.	Parent=comp116487_c0_seq1.mrna1;Target=comp116487_c0_seq1 2 591 -
Chr1	stalkie_big_nohaplotig	exon	41380933	41381344	99	-	.	Parent=comp116487_c0_seq1.mrna1;Target=comp116487_c0_seq1 592 1003 -
Chr1	stalkie_big_nohaplotig	CDS	41373414	41373628	.	-	0	Parent=comp116487_c0_seq1.mrna1
Chr1	gffcl	locus	41403418	41404077	.	-	.	ID=RLOC_00007426;geneIDs=comp154996_c2_seq1.path1;transcripts=comp154996_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41403418	41404077	.	-	.	ID=comp154996_c2_seq1.mrna1;geneID=comp154996_c2_seq1.path1;Name=comp154996_c2_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=655;mismatches=4;indels=5;unknowns=0;Target=comp154996_c2_seq1 663 1 .;CDS_Target=comp154996_c2_seq1 61 2 .;locus=RLOC_00007426
Chr1	stalkie_big_nohaplotig	exon	41403418	41404077	98	-	.	Parent=comp154996_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	41404019	41404076	.	-	0	Parent=comp154996_c2_seq1.mrna1
Chr1	gffcl	locus	41412662	41413193	.	+	.	ID=RLOC_00007427;geneIDs=FBgn0260027.1.path1;transcripts=FBgn0260027.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41412662	41413193	.	+	.	ID=FBgn0260027.1.mrna1;geneID=FBgn0260027.1.path1;Name=FBgn0260027.1;Dir=sensecoverage=100.0;identity=99.8;matches=416;mismatches=0;indels=1;unknowns=0;locus=RLOC_00007427
Chr1	stalkie_big_nohaplotig	exon	41412662	41412811	99	+	.	Parent=FBgn0260027.1.mrna1;Target=FBgn0260027.1 1 151 +
Chr1	stalkie_big_nohaplotig	exon	41412874	41413016	100	+	.	Parent=FBgn0260027.1.mrna1;Target=FBgn0260027.1 152 294 +
Chr1	stalkie_big_nohaplotig	exon	41413071	41413193	100	+	.	Parent=FBgn0260027.1.mrna1;Target=FBgn0260027.1 295 417 +
Chr1	stalkie_big_nohaplotig	CDS	41412664	41412811	.	+	0	Parent=FBgn0260027.1.mrna1;Target=FBgn0260027.1 3 151 +
Chr1	stalkie_big_nohaplotig	CDS	41412874	41412919	.	+	2	Parent=FBgn0260027.1.mrna1;Target=FBgn0260027.1 152 197 +
Chr1	gffcl	locus	41416442	41420564	.	-	.	ID=RLOC_00007428;geneIDs=FBgn0042134.1.path2;transcripts=FBgn0042134.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	41416442	41420564	.	-	.	ID=FBgn0042134.1.mrna2;geneID=FBgn0042134.1.path2;Name=FBgn0042134.1;Dir=sensecoverage=99.4;identity=99.5;matches=3012;mismatches=7;indels=9;unknowns=0;locus=RLOC_00007428
Chr1	stalkie_big_nohaplotig	exon	41416442	41418875	99	-	.	Parent=FBgn0042134.1.mrna2;Target=FBgn0042134.1 609 3039 +
Chr1	stalkie_big_nohaplotig	exon	41418936	41419102	100	-	.	Parent=FBgn0042134.1.mrna2;Target=FBgn0042134.1 442 608 +
Chr1	stalkie_big_nohaplotig	exon	41419178	41419360	100	-	.	Parent=FBgn0042134.1.mrna2;Target=FBgn0042134.1 259 441 +
Chr1	stalkie_big_nohaplotig	exon	41420324	41420564	100	-	.	Parent=FBgn0042134.1.mrna2;Target=FBgn0042134.1 18 258 +
Chr1	stalkie_big_nohaplotig	CDS	41416442	41418875	.	-	1	Parent=FBgn0042134.1.mrna2;Target=FBgn0042134.1 609 3039 +
Chr1	stalkie_big_nohaplotig	CDS	41418936	41419102	.	-	0	Parent=FBgn0042134.1.mrna2;Target=FBgn0042134.1 442 608 +
Chr1	stalkie_big_nohaplotig	CDS	41419178	41419360	.	-	0	Parent=FBgn0042134.1.mrna2;Target=FBgn0042134.1 259 441 +
Chr1	stalkie_big_nohaplotig	CDS	41420324	41420563	.	-	0	Parent=FBgn0042134.1.mrna2;Target=FBgn0042134.1 19 258 +
Chr1	gffcl	locus	41468134	41579625	.	-	.	ID=RLOC_00007429;geneIDs=comp152374_c0_seq1.path1;transcripts=comp152374_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41468134	41579625	.	-	.	ID=comp152374_c0_seq1.mrna1;geneID=comp152374_c0_seq1.path1;Name=comp152374_c0_seq1;Dir=indeterminatecoverage=96.7;identity=93.9;matches=788;mismatches=37;indels=14;unknowns=0;Target=comp152374_c0_seq1 223 200 .;locus=RLOC_00007429
Chr1	stalkie_big_nohaplotig	exon	41468134	41468674	95	-	.	Parent=comp152374_c0_seq1.mrna1;Target=comp152374_c0_seq1 937 395 .
Chr1	stalkie_big_nohaplotig	exon	41468770	41468967	92	-	.	Parent=comp152374_c0_seq1.mrna1;Target=comp152374_c0_seq1 361 167 .
Chr1	stalkie_big_nohaplotig	exon	41470504	41470505	100	-	.	Parent=comp152374_c0_seq1.mrna1;Target=comp152374_c0_seq1 166 165 .
Chr1	stalkie_big_nohaplotig	exon	41473800	41473805	100	-	.	Parent=comp152374_c0_seq1.mrna1;Target=comp152374_c0_seq1 164 159 .
Chr1	stalkie_big_nohaplotig	exon	41474074	41474086	76	-	.	Parent=comp152374_c0_seq1.mrna1;Target=comp152374_c0_seq1 158 146 .
Chr1	stalkie_big_nohaplotig	exon	41479912	41479913	100	-	.	Parent=comp152374_c0_seq1.mrna1;Target=comp152374_c0_seq1 145 144 .
Chr1	stalkie_big_nohaplotig	exon	41481547	41481548	100	-	.	Parent=comp152374_c0_seq1.mrna1;Target=comp152374_c0_seq1 143 142 .
Chr1	stalkie_big_nohaplotig	exon	41495640	41495641	100	-	.	Parent=comp152374_c0_seq1.mrna1;Target=comp152374_c0_seq1 141 140 .
Chr1	stalkie_big_nohaplotig	exon	41511559	41511564	100	-	.	Parent=comp152374_c0_seq1.mrna1;Target=comp152374_c0_seq1 139 134 .
Chr1	stalkie_big_nohaplotig	exon	41556053	41556056	100	-	.	Parent=comp152374_c0_seq1.mrna1;Target=comp152374_c0_seq1 133 130 .
Chr1	stalkie_big_nohaplotig	exon	41558778	41558787	90	-	.	Parent=comp152374_c0_seq1.mrna1;Target=comp152374_c0_seq1 129 120 .
Chr1	stalkie_big_nohaplotig	exon	41563372	41563383	52	-	.	Parent=comp152374_c0_seq1.mrna1;Target=comp152374_c0_seq1 119 99 .
Chr1	stalkie_big_nohaplotig	exon	41565881	41565891	100	-	.	Parent=comp152374_c0_seq1.mrna1;Target=comp152374_c0_seq1 61 51 .
Chr1	stalkie_big_nohaplotig	exon	41569273	41569281	100	-	.	Parent=comp152374_c0_seq1.mrna1;Target=comp152374_c0_seq1 50 42 .
Chr1	stalkie_big_nohaplotig	exon	41576779	41576782	100	-	.	Parent=comp152374_c0_seq1.mrna1;Target=comp152374_c0_seq1 41 38 .
Chr1	stalkie_big_nohaplotig	exon	41579620	41579625	100	-	.	Parent=comp152374_c0_seq1.mrna1;Target=comp152374_c0_seq1 37 32 .
Chr1	stalkie_big_nohaplotig	CDS	41468911	41468934	.	-	0	Parent=comp152374_c0_seq1.mrna1
Chr1	gffcl	locus	41484261	41522100	.	.	.	ID=RLOC_00007430;geneIDs=FBgn0036454.1.path2,comp116620_c0_seq1.path1,comp163258_c0_seq1.path1;transcripts=comp163258_c0_seq1.mrna1,FBgn0036454.1.mrna2,comp116620_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41484261	41514405	.	+	.	ID=comp163258_c0_seq1.mrna1;geneID=comp163258_c0_seq1.path1;Name=comp163258_c0_seq1;Dir=sensecoverage=76.8;identity=99.7;matches=4893;mismatches=10;indels=6;unknowns=0;locus=RLOC_00007430
Chr1	stalkie_big_nohaplotig	exon	41484261	41484270	100	+	.	Parent=comp163258_c0_seq1.mrna1;Target=comp163258_c0_seq1 499 508 +
Chr1	stalkie_big_nohaplotig	exon	41487251	41487259	100	+	.	Parent=comp163258_c0_seq1.mrna1;Target=comp163258_c0_seq1 606 614 +
Chr1	stalkie_big_nohaplotig	exon	41488275	41488366	100	+	.	Parent=comp163258_c0_seq1.mrna1;Target=comp163258_c0_seq1 626 717 +
Chr1	stalkie_big_nohaplotig	exon	41488455	41488625	100	+	.	Parent=comp163258_c0_seq1.mrna1;Target=comp163258_c0_seq1 718 888 +
Chr1	stalkie_big_nohaplotig	exon	41488685	41488822	100	+	.	Parent=comp163258_c0_seq1.mrna1;Target=comp163258_c0_seq1 889 1026 +
Chr1	stalkie_big_nohaplotig	exon	41488892	41489993	99	+	.	Parent=comp163258_c0_seq1.mrna1;Target=comp163258_c0_seq1 1027 2128 +
Chr1	stalkie_big_nohaplotig	exon	41490065	41490278	99	+	.	Parent=comp163258_c0_seq1.mrna1;Target=comp163258_c0_seq1 2129 2342 +
Chr1	stalkie_big_nohaplotig	exon	41491468	41491741	100	+	.	Parent=comp163258_c0_seq1.mrna1;Target=comp163258_c0_seq1 2343 2616 +
Chr1	stalkie_big_nohaplotig	exon	41494838	41495014	98	+	.	Parent=comp163258_c0_seq1.mrna1;Target=comp163258_c0_seq1 2617 2793 +
Chr1	stalkie_big_nohaplotig	exon	41495248	41495600	100	+	.	Parent=comp163258_c0_seq1.mrna1;Target=comp163258_c0_seq1 2794 3146 +
Chr1	stalkie_big_nohaplotig	exon	41501845	41501983	99	+	.	Parent=comp163258_c0_seq1.mrna1;Target=comp163258_c0_seq1 3147 3285 +
Chr1	stalkie_big_nohaplotig	exon	41502265	41502403	100	+	.	Parent=comp163258_c0_seq1.mrna1;Target=comp163258_c0_seq1 3286 3424 +
Chr1	stalkie_big_nohaplotig	exon	41502522	41502714	100	+	.	Parent=comp163258_c0_seq1.mrna1;Target=comp163258_c0_seq1 3425 3617 +
Chr1	stalkie_big_nohaplotig	exon	41502784	41503030	100	+	.	Parent=comp163258_c0_seq1.mrna1;Target=comp163258_c0_seq1 3618 3864 +
Chr1	stalkie_big_nohaplotig	exon	41503162	41503840	100	+	.	Parent=comp163258_c0_seq1.mrna1;Target=comp163258_c0_seq1 3865 4543 +
Chr1	stalkie_big_nohaplotig	exon	41505466	41505704	100	+	.	Parent=comp163258_c0_seq1.mrna1;Target=comp163258_c0_seq1 4544 4782 +
Chr1	stalkie_big_nohaplotig	exon	41513418	41513656	100	+	.	Parent=comp163258_c0_seq1.mrna1;Target=comp163258_c0_seq1 4783 5021 +
Chr1	stalkie_big_nohaplotig	exon	41513913	41514405	98	+	.	Parent=comp163258_c0_seq1.mrna1;Target=comp163258_c0_seq1 5022 5508 +
Chr1	stalkie_big_nohaplotig	CDS	41484261	41484270	.	+	0	Parent=comp163258_c0_seq1.mrna1;Target=comp163258_c0_seq1 499 508 +
Chr1	stalkie_big_nohaplotig	CDS	41487251	41487259	.	+	2	Parent=comp163258_c0_seq1.mrna1;Target=comp163258_c0_seq1 606 614 +
Chr1	stalkie_big_nohaplotig	mRNA	41488276	41522100	.	+	.	ID=FBgn0036454.1.mrna2;geneID=FBgn0036454.1.path2;Name=FBgn0036454.1;Dir=sensecoverage=98.8;identity=99.8;matches=4580;mismatches=10;indels=0;unknowns=0;locus=RLOC_00007430
Chr1	stalkie_big_nohaplotig	exon	41488276	41488366	100	+	.	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 55 145 +
Chr1	stalkie_big_nohaplotig	exon	41488455	41488625	100	+	.	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 146 316 +
Chr1	stalkie_big_nohaplotig	exon	41488685	41488822	100	+	.	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 317 454 +
Chr1	stalkie_big_nohaplotig	exon	41488892	41489993	99	+	.	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 455 1556 +
Chr1	stalkie_big_nohaplotig	exon	41490065	41490278	99	+	.	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 1557 1770 +
Chr1	stalkie_big_nohaplotig	exon	41491468	41491741	100	+	.	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 1771 2044 +
Chr1	stalkie_big_nohaplotig	exon	41494838	41495014	98	+	.	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 2045 2221 +
Chr1	stalkie_big_nohaplotig	exon	41495248	41495600	100	+	.	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 2222 2574 +
Chr1	stalkie_big_nohaplotig	exon	41501845	41501983	99	+	.	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 2575 2713 +
Chr1	stalkie_big_nohaplotig	exon	41502265	41502403	100	+	.	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 2714 2852 +
Chr1	stalkie_big_nohaplotig	exon	41502522	41502714	100	+	.	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 2853 3045 +
Chr1	stalkie_big_nohaplotig	exon	41502784	41503030	100	+	.	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 3046 3292 +
Chr1	stalkie_big_nohaplotig	exon	41503162	41503840	100	+	.	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 3293 3971 +
Chr1	stalkie_big_nohaplotig	exon	41505466	41505704	100	+	.	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 3972 4210 +
Chr1	stalkie_big_nohaplotig	exon	41513418	41513656	100	+	.	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 4211 4449 +
Chr1	stalkie_big_nohaplotig	exon	41513913	41514069	100	+	.	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 4450 4606 +
Chr1	stalkie_big_nohaplotig	exon	41515447	41515472	100	+	.	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 4607 4632 +
Chr1	stalkie_big_nohaplotig	exon	41522089	41522100	100	+	.	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 4633 4644 +
Chr1	stalkie_big_nohaplotig	CDS	41488276	41488366	.	+	0	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 55 145 +
Chr1	stalkie_big_nohaplotig	CDS	41488455	41488625	.	+	2	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 146 316 +
Chr1	stalkie_big_nohaplotig	CDS	41488685	41488822	.	+	2	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 317 454 +
Chr1	stalkie_big_nohaplotig	CDS	41488892	41489993	.	+	2	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 455 1556 +
Chr1	stalkie_big_nohaplotig	CDS	41490065	41490278	.	+	1	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 1557 1770 +
Chr1	stalkie_big_nohaplotig	CDS	41491468	41491741	.	+	0	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 1771 2044 +
Chr1	stalkie_big_nohaplotig	CDS	41494838	41495014	.	+	2	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 2045 2221 +
Chr1	stalkie_big_nohaplotig	CDS	41495248	41495600	.	+	2	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 2222 2574 +
Chr1	stalkie_big_nohaplotig	CDS	41501845	41501983	.	+	0	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 2575 2713 +
Chr1	stalkie_big_nohaplotig	CDS	41502265	41502403	.	+	2	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 2714 2852 +
Chr1	stalkie_big_nohaplotig	CDS	41502522	41502714	.	+	1	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 2853 3045 +
Chr1	stalkie_big_nohaplotig	CDS	41502784	41503030	.	+	0	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 3046 3292 +
Chr1	stalkie_big_nohaplotig	CDS	41503162	41503840	.	+	2	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 3293 3971 +
Chr1	stalkie_big_nohaplotig	CDS	41505466	41505704	.	+	1	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 3972 4210 +
Chr1	stalkie_big_nohaplotig	CDS	41513418	41513656	.	+	2	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 4211 4449 +
Chr1	stalkie_big_nohaplotig	CDS	41513913	41514069	.	+	0	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 4450 4606 +
Chr1	stalkie_big_nohaplotig	CDS	41515447	41515472	.	+	2	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 4607 4632 +
Chr1	stalkie_big_nohaplotig	CDS	41522089	41522100	.	+	0	Parent=FBgn0036454.1.mrna2;Target=FBgn0036454.1 4633 4644 +
Chr1	stalkie_big_nohaplotig	mRNA	41495015	41495268	.	-	.	ID=comp116620_c0_seq1.mrna1;geneID=comp116620_c0_seq1.path1;Name=comp116620_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=253;mismatches=1;indels=0;unknowns=0;Target=comp116620_c0_seq1 254 1 .;CDS_Target=comp116620_c0_seq1 253 98 .;locus=RLOC_00007430
Chr1	stalkie_big_nohaplotig	exon	41495015	41495268	99	-	.	Parent=comp116620_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	41495016	41495171	.	-	0	Parent=comp116620_c0_seq1.mrna1
Chr1	gffcl	locus	41494393	41494773	.	+	.	ID=RLOC_00007431;geneIDs=comp134932_c0_seq1.path1;transcripts=comp134932_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41494393	41494773	.	+	.	ID=comp134932_c0_seq1.mrna1;geneID=comp134932_c0_seq1.path1;Name=comp134932_c0_seq1;Dir=indeterminatecoverage=94.1;identity=99.5;matches=380;mismatches=1;indels=1;unknowns=0;Target=comp134932_c0_seq1 382 1 .;CDS_Target=comp134932_c0_seq1 288 55 .;locus=RLOC_00007431
Chr1	stalkie_big_nohaplotig	exon	41494393	41494773	99	+	.	Parent=comp134932_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	41494447	41494680	.	+	0	Parent=comp134932_c0_seq1.mrna1
Chr1	gffcl	locus	41525477	41527216	.	+	.	ID=RLOC_00007432;geneIDs=comp151728_c0_seq1.path1;transcripts=comp151728_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41525477	41527216	.	+	.	ID=comp151728_c0_seq1.mrna1;geneID=comp151728_c0_seq1.path1;Name=comp151728_c0_seq1;Dir=antisensecoverage=100.0;identity=96.6;matches=1562;mismatches=20;indels=35;unknowns=0;Target=comp151728_c0_seq1 852 1037 .;locus=RLOC_00007432
Chr1	stalkie_big_nohaplotig	exon	41525477	41526867	98	+	.	Parent=comp151728_c0_seq1.mrna1;Target=comp151728_c0_seq1 193 1591 -
Chr1	stalkie_big_nohaplotig	exon	41527000	41527216	87	+	.	Parent=comp151728_c0_seq1.mrna1;Target=comp151728_c0_seq1 1 192 -
Chr1	stalkie_big_nohaplotig	CDS	41526031	41526216	.	+	0	Parent=comp151728_c0_seq1.mrna1
Chr1	gffcl	locus	41552347	41554812	.	-	.	ID=RLOC_00007433;geneIDs=ORF2723.path1;transcripts=ORF2723.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41552347	41554812	.	-	.	ID=ORF2723.mrna1;geneID=ORF2723.path1;Name=ORF2723;Dir=sensecoverage=100.0;identity=99.5;matches=812;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007433
Chr1	stalkie_big_nohaplotig	exon	41552347	41553014	99	-	.	Parent=ORF2723.mrna1;Target=ORF2723 149 816 +
Chr1	stalkie_big_nohaplotig	exon	41554578	41554713	99	-	.	Parent=ORF2723.mrna1;Target=ORF2723 13 148 +
Chr1	stalkie_big_nohaplotig	exon	41554801	41554812	100	-	.	Parent=ORF2723.mrna1;Target=ORF2723 1 12 +
Chr1	stalkie_big_nohaplotig	CDS	41552347	41553014	.	-	2	Parent=ORF2723.mrna1;Target=ORF2723 149 816 +
Chr1	stalkie_big_nohaplotig	CDS	41554578	41554713	.	-	0	Parent=ORF2723.mrna1;Target=ORF2723 13 148 +
Chr1	stalkie_big_nohaplotig	CDS	41554801	41554812	.	-	0	Parent=ORF2723.mrna1;Target=ORF2723 1 12 +
Chr1	gffcl	locus	41555892	41556423	.	+	.	ID=RLOC_00007434;geneIDs=FBgn0260027.1.path2;transcripts=FBgn0260027.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	41555892	41556423	.	+	.	ID=FBgn0260027.1.mrna2;geneID=FBgn0260027.1.path2;Name=FBgn0260027.1;Dir=sensecoverage=100.0;identity=99.5;matches=415;mismatches=1;indels=1;unknowns=0;locus=RLOC_00007434
Chr1	stalkie_big_nohaplotig	exon	41555892	41556041	98	+	.	Parent=FBgn0260027.1.mrna2;Target=FBgn0260027.1 1 151 +
Chr1	stalkie_big_nohaplotig	exon	41556104	41556246	100	+	.	Parent=FBgn0260027.1.mrna2;Target=FBgn0260027.1 152 294 +
Chr1	stalkie_big_nohaplotig	exon	41556301	41556423	100	+	.	Parent=FBgn0260027.1.mrna2;Target=FBgn0260027.1 295 417 +
Chr1	stalkie_big_nohaplotig	CDS	41555894	41556041	.	+	0	Parent=FBgn0260027.1.mrna2;Target=FBgn0260027.1 3 151 +
Chr1	stalkie_big_nohaplotig	CDS	41556104	41556149	.	+	2	Parent=FBgn0260027.1.mrna2;Target=FBgn0260027.1 152 197 +
Chr1	gffcl	locus	41559510	41563633	.	-	.	ID=RLOC_00007435;geneIDs=FBgn0042134.1.path1;transcripts=FBgn0042134.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41559510	41563633	.	-	.	ID=FBgn0042134.1.mrna1;geneID=FBgn0042134.1.path1;Name=FBgn0042134.1;Dir=sensecoverage=99.4;identity=99.6;matches=3014;mismatches=8;indels=3;unknowns=0;locus=RLOC_00007435
Chr1	stalkie_big_nohaplotig	exon	41559510	41561943	99	-	.	Parent=FBgn0042134.1.mrna1;Target=FBgn0042134.1 609 3039 +
Chr1	stalkie_big_nohaplotig	exon	41562004	41562170	100	-	.	Parent=FBgn0042134.1.mrna1;Target=FBgn0042134.1 442 608 +
Chr1	stalkie_big_nohaplotig	exon	41562246	41562428	100	-	.	Parent=FBgn0042134.1.mrna1;Target=FBgn0042134.1 259 441 +
Chr1	stalkie_big_nohaplotig	exon	41563393	41563633	100	-	.	Parent=FBgn0042134.1.mrna1;Target=FBgn0042134.1 18 258 +
Chr1	stalkie_big_nohaplotig	CDS	41559510	41561943	.	-	1	Parent=FBgn0042134.1.mrna1;Target=FBgn0042134.1 609 3039 +
Chr1	stalkie_big_nohaplotig	CDS	41562004	41562170	.	-	0	Parent=FBgn0042134.1.mrna1;Target=FBgn0042134.1 442 608 +
Chr1	stalkie_big_nohaplotig	CDS	41562246	41562428	.	-	0	Parent=FBgn0042134.1.mrna1;Target=FBgn0042134.1 259 441 +
Chr1	stalkie_big_nohaplotig	CDS	41563393	41563632	.	-	0	Parent=FBgn0042134.1.mrna1;Target=FBgn0042134.1 19 258 +
Chr1	gffcl	locus	41570070	41579160	.	-	.	ID=RLOC_00007436;geneIDs=FBgn0259099.1.path1;transcripts=FBgn0259099.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41570070	41579160	.	-	.	ID=FBgn0259099.1.mrna1;geneID=FBgn0259099.1.path1;Name=FBgn0259099.1;Dir=sensecoverage=99.5;identity=99.7;matches=2238;mismatches=6;indels=0;unknowns=0;locus=RLOC_00007436
Chr1	stalkie_big_nohaplotig	exon	41570070	41570220	100	-	.	Parent=FBgn0259099.1.mrna1;Target=FBgn0259099.1 2106 2256 +
Chr1	stalkie_big_nohaplotig	exon	41570295	41570691	98	-	.	Parent=FBgn0259099.1.mrna1;Target=FBgn0259099.1 1709 2105 +
Chr1	stalkie_big_nohaplotig	exon	41573719	41574139	100	-	.	Parent=FBgn0259099.1.mrna1;Target=FBgn0259099.1 1288 1708 +
Chr1	stalkie_big_nohaplotig	exon	41575234	41575632	100	-	.	Parent=FBgn0259099.1.mrna1;Target=FBgn0259099.1 889 1287 +
Chr1	stalkie_big_nohaplotig	exon	41575702	41575797	100	-	.	Parent=FBgn0259099.1.mrna1;Target=FBgn0259099.1 793 888 +
Chr1	stalkie_big_nohaplotig	exon	41575879	41576050	100	-	.	Parent=FBgn0259099.1.mrna1;Target=FBgn0259099.1 621 792 +
Chr1	stalkie_big_nohaplotig	exon	41576120	41576269	100	-	.	Parent=FBgn0259099.1.mrna1;Target=FBgn0259099.1 471 620 +
Chr1	stalkie_big_nohaplotig	exon	41578550	41578938	100	-	.	Parent=FBgn0259099.1.mrna1;Target=FBgn0259099.1 82 470 +
Chr1	stalkie_big_nohaplotig	exon	41579092	41579160	98	-	.	Parent=FBgn0259099.1.mrna1;Target=FBgn0259099.1 13 81 +
Chr1	stalkie_big_nohaplotig	CDS	41570070	41570220	.	-	1	Parent=FBgn0259099.1.mrna1;Target=FBgn0259099.1 2106 2256 +
Chr1	stalkie_big_nohaplotig	CDS	41570295	41570691	.	-	2	Parent=FBgn0259099.1.mrna1;Target=FBgn0259099.1 1709 2105 +
Chr1	stalkie_big_nohaplotig	CDS	41573719	41574139	.	-	0	Parent=FBgn0259099.1.mrna1;Target=FBgn0259099.1 1288 1708 +
Chr1	stalkie_big_nohaplotig	CDS	41575234	41575632	.	-	0	Parent=FBgn0259099.1.mrna1;Target=FBgn0259099.1 889 1287 +
Chr1	stalkie_big_nohaplotig	CDS	41575702	41575797	.	-	0	Parent=FBgn0259099.1.mrna1;Target=FBgn0259099.1 793 888 +
Chr1	stalkie_big_nohaplotig	CDS	41575879	41576050	.	-	1	Parent=FBgn0259099.1.mrna1;Target=FBgn0259099.1 621 792 +
Chr1	stalkie_big_nohaplotig	CDS	41576120	41576269	.	-	1	Parent=FBgn0259099.1.mrna1;Target=FBgn0259099.1 471 620 +
Chr1	stalkie_big_nohaplotig	CDS	41578550	41578938	.	-	0	Parent=FBgn0259099.1.mrna1;Target=FBgn0259099.1 82 470 +
Chr1	stalkie_big_nohaplotig	CDS	41579092	41579160	.	-	0	Parent=FBgn0259099.1.mrna1;Target=FBgn0259099.1 13 81 +
Chr1	gffcl	locus	41608191	43259445	.	-	.	ID=RLOC_00007437;geneIDs=comp153021_c2_seq1.path1,comp160573_c0_seq1.path1;transcripts=comp153021_c2_seq1.mrna1,comp160573_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41608191	43259445	.	-	.	ID=comp153021_c2_seq1.mrna1;geneID=comp153021_c2_seq1.path1;Name=comp153021_c2_seq1;Dir=indeterminatecoverage=68.2;identity=88.3;matches=491;mismatches=51;indels=14;unknowns=0;locus=RLOC_00007437
Chr1	stalkie_big_nohaplotig	exon	41608191	41608318	78	-	.	Parent=comp153021_c2_seq1.mrna1;Target=comp153021_c2_seq1 785 658 .
Chr1	stalkie_big_nohaplotig	exon	41661943	41662315	90	-	.	Parent=comp153021_c2_seq1.mrna1;Target=comp153021_c2_seq1 657 271 .
Chr1	stalkie_big_nohaplotig	exon	41690780	41690797	100	-	.	Parent=comp153021_c2_seq1.mrna1;Target=comp153021_c2_seq1 270 253 .
Chr1	stalkie_big_nohaplotig	exon	41698461	41698470	100	-	.	Parent=comp153021_c2_seq1.mrna1;Target=comp153021_c2_seq1 248 239 .
Chr1	stalkie_big_nohaplotig	exon	43258245	43258251	100	-	.	Parent=comp153021_c2_seq1.mrna1;Target=comp153021_c2_seq1 238 232 .
Chr1	stalkie_big_nohaplotig	exon	43259440	43259445	100	-	.	Parent=comp153021_c2_seq1.mrna1;Target=comp153021_c2_seq1 231 226 .
Chr1	stalkie_big_nohaplotig	CDS	41662314	41662315	.	-	0	Parent=comp153021_c2_seq1.mrna1;Target=comp153021_c2_seq1 272 271 .
Chr1	stalkie_big_nohaplotig	CDS	41690780	41690797	.	-	0	Parent=comp153021_c2_seq1.mrna1;Target=comp153021_c2_seq1 270 253 .
Chr1	stalkie_big_nohaplotig	CDS	41698461	41698470	.	-	1	Parent=comp153021_c2_seq1.mrna1;Target=comp153021_c2_seq1 248 239 .
Chr1	stalkie_big_nohaplotig	CDS	43258245	43258251	.	-	2	Parent=comp153021_c2_seq1.mrna1;Target=comp153021_c2_seq1 238 232 .
Chr1	stalkie_big_nohaplotig	CDS	43259440	43259443	.	-	0	Parent=comp153021_c2_seq1.mrna1;Target=comp153021_c2_seq1 231 228 .
Chr1	stalkie_big_nohaplotig	mRNA	41660042	41661984	.	-	.	ID=comp160573_c0_seq1.mrna1;geneID=comp160573_c0_seq1.path1;Name=comp160573_c0_seq1;Dir=indeterminatecoverage=100.0;identity=86.6;matches=1643;mismatches=96;indels=159;unknowns=0;Target=comp160573_c0_seq1 1573 1508 .;locus=RLOC_00007437
Chr1	stalkie_big_nohaplotig	exon	41660042	41661172	91	-	.	Parent=comp160573_c0_seq1.mrna1;Target=comp160573_c0_seq1 1840 719 .
Chr1	stalkie_big_nohaplotig	exon	41661263	41661577	83	-	.	Parent=comp160573_c0_seq1.mrna1;Target=comp160573_c0_seq1 718 408 .
Chr1	stalkie_big_nohaplotig	exon	41661617	41661984	76	-	.	Parent=comp160573_c0_seq1.mrna1;Target=comp160573_c0_seq1 390 1 .
Chr1	stalkie_big_nohaplotig	CDS	41660326	41660391	.	-	0	Parent=comp160573_c0_seq1.mrna1
Chr1	gffcl	locus	41653230	41654584	.	-	.	ID=RLOC_00007438;geneIDs=FBgn0034603.2.path1;transcripts=FBgn0034603.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41653230	41654584	.	-	.	ID=FBgn0034603.2.mrna1;geneID=FBgn0034603.2.path1;Name=FBgn0034603.2;Dir=sensecoverage=99.0;identity=99.3;matches=1274;mismatches=9;indels=0;unknowns=0;locus=RLOC_00007438
Chr1	stalkie_big_nohaplotig	exon	41653230	41653294	100	-	.	Parent=FBgn0034603.2.mrna1;Target=FBgn0034603.2 1232 1296 +
Chr1	stalkie_big_nohaplotig	exon	41653367	41654584	99	-	.	Parent=FBgn0034603.2.mrna1;Target=FBgn0034603.2 14 1231 +
Chr1	stalkie_big_nohaplotig	CDS	41653230	41653294	.	-	2	Parent=FBgn0034603.2.mrna1;Target=FBgn0034603.2 1232 1296 +
Chr1	stalkie_big_nohaplotig	CDS	41653367	41654582	.	-	0	Parent=FBgn0034603.2.mrna1;Target=FBgn0034603.2 16 1231 +
Chr1	gffcl	locus	41654910	41692597	.	-	.	ID=RLOC_00007439;geneIDs=FBgn0034603.1.path1,comp112339_c0_seq1.path1,comp129157_c0_seq1.path1,comp150925_c1_seq1.path1;transcripts=comp129157_c0_seq1.mrna1,comp150925_c1_seq1.mrna1,FBgn0034603.1.mrna1,comp112339_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41654910	41659739	.	-	.	ID=comp129157_c0_seq1.mrna1;geneID=comp129157_c0_seq1.path1;Name=comp129157_c0_seq1;Dir=sensecoverage=98.6;identity=97.7;matches=676;mismatches=7;indels=9;unknowns=0;locus=RLOC_00007439
Chr1	stalkie_big_nohaplotig	exon	41654910	41655571	97	-	.	Parent=comp129157_c0_seq1.mrna1;Target=comp129157_c0_seq1 22 692 +
Chr1	stalkie_big_nohaplotig	exon	41659719	41659739	100	-	.	Parent=comp129157_c0_seq1.mrna1;Target=comp129157_c0_seq1 1 21 +
Chr1	stalkie_big_nohaplotig	CDS	41655261	41655571	.	-	2	Parent=comp129157_c0_seq1.mrna1;Target=comp129157_c0_seq1 22 338 +
Chr1	stalkie_big_nohaplotig	CDS	41659719	41659737	.	-	0	Parent=comp129157_c0_seq1.mrna1;Target=comp129157_c0_seq1 3 21 +
Chr1	stalkie_big_nohaplotig	mRNA	41659403	41692597	.	-	.	ID=comp150925_c1_seq1.mrna1;geneID=comp150925_c1_seq1.path1;Name=comp150925_c1_seq1;Dir=antisensecoverage=99.8;identity=99.0;matches=2315;mismatches=14;indels=9;unknowns=0;locus=RLOC_00007439
Chr1	stalkie_big_nohaplotig	exon	41659403	41659932	99	-	.	Parent=comp150925_c1_seq1.mrna1;Target=comp150925_c1_seq1 5 534 -
Chr1	stalkie_big_nohaplotig	exon	41663130	41663747	97	-	.	Parent=comp150925_c1_seq1.mrna1;Target=comp150925_c1_seq1 535 1143 -
Chr1	stalkie_big_nohaplotig	exon	41668984	41669028	100	-	.	Parent=comp150925_c1_seq1.mrna1;Target=comp150925_c1_seq1 1144 1188 -
Chr1	stalkie_big_nohaplotig	exon	41669235	41669415	100	-	.	Parent=comp150925_c1_seq1.mrna1;Target=comp150925_c1_seq1 1189 1369 -
Chr1	stalkie_big_nohaplotig	exon	41669478	41669767	99	-	.	Parent=comp150925_c1_seq1.mrna1;Target=comp150925_c1_seq1 1370 1659 -
Chr1	stalkie_big_nohaplotig	exon	41669895	41670205	100	-	.	Parent=comp150925_c1_seq1.mrna1;Target=comp150925_c1_seq1 1660 1970 -
Chr1	stalkie_big_nohaplotig	exon	41692235	41692597	100	-	.	Parent=comp150925_c1_seq1.mrna1;Target=comp150925_c1_seq1 1971 2333 -
Chr1	stalkie_big_nohaplotig	CDS	41659708	41659932	.	-	0	Parent=comp150925_c1_seq1.mrna1;Target=comp150925_c1_seq1 310 534 .
Chr1	stalkie_big_nohaplotig	CDS	41663130	41663747	.	-	0	Parent=comp150925_c1_seq1.mrna1;Target=comp150925_c1_seq1 535 1143 .
Chr1	stalkie_big_nohaplotig	CDS	41668984	41669028	.	-	0	Parent=comp150925_c1_seq1.mrna1;Target=comp150925_c1_seq1 1144 1188 .
Chr1	stalkie_big_nohaplotig	CDS	41669235	41669415	.	-	1	Parent=comp150925_c1_seq1.mrna1;Target=comp150925_c1_seq1 1189 1369 .
Chr1	stalkie_big_nohaplotig	CDS	41669478	41669767	.	-	0	Parent=comp150925_c1_seq1.mrna1;Target=comp150925_c1_seq1 1370 1659 .
Chr1	stalkie_big_nohaplotig	CDS	41669895	41670205	.	-	2	Parent=comp150925_c1_seq1.mrna1;Target=comp150925_c1_seq1 1660 1970 .
Chr1	stalkie_big_nohaplotig	CDS	41692235	41692241	.	-	0	Parent=comp150925_c1_seq1.mrna1;Target=comp150925_c1_seq1 1971 1977 .
Chr1	stalkie_big_nohaplotig	mRNA	41659711	41670205	.	-	.	ID=FBgn0034603.1.mrna1;geneID=FBgn0034603.1.path1;Name=FBgn0034603.1;Dir=sensecoverage=98.7;identity=99.7;matches=1001;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007439
Chr1	stalkie_big_nohaplotig	exon	41659711	41659932	99	-	.	Parent=FBgn0034603.1.mrna1;Target=FBgn0034603.1 796 1017 +
Chr1	stalkie_big_nohaplotig	exon	41669235	41669415	100	-	.	Parent=FBgn0034603.1.mrna1;Target=FBgn0034603.1 615 795 +
Chr1	stalkie_big_nohaplotig	exon	41669478	41669767	99	-	.	Parent=FBgn0034603.1.mrna1;Target=FBgn0034603.1 325 614 +
Chr1	stalkie_big_nohaplotig	exon	41669895	41670205	100	-	.	Parent=FBgn0034603.1.mrna1;Target=FBgn0034603.1 14 324 +
Chr1	stalkie_big_nohaplotig	CDS	41659711	41659932	.	-	0	Parent=FBgn0034603.1.mrna1;Target=FBgn0034603.1 796 1017 +
Chr1	stalkie_big_nohaplotig	CDS	41669235	41669415	.	-	1	Parent=FBgn0034603.1.mrna1;Target=FBgn0034603.1 615 795 +
Chr1	stalkie_big_nohaplotig	CDS	41669478	41669767	.	-	0	Parent=FBgn0034603.1.mrna1;Target=FBgn0034603.1 325 614 +
Chr1	stalkie_big_nohaplotig	CDS	41669895	41670203	.	-	0	Parent=FBgn0034603.1.mrna1;Target=FBgn0034603.1 16 324 +
Chr1	stalkie_big_nohaplotig	mRNA	41662580	41663152	.	-	.	ID=comp112339_c0_seq1.mrna1;geneID=comp112339_c0_seq1.path1;Name=comp112339_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.8;matches=566;mismatches=3;indels=4;unknowns=0;Target=comp112339_c0_seq1 569 1 .;CDS_Target=comp112339_c0_seq1 268 2 .;locus=RLOC_00007439
Chr1	stalkie_big_nohaplotig	exon	41662580	41663152	98	-	.	Parent=comp112339_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	41662882	41663151	.	-	0	Parent=comp112339_c0_seq1.mrna1
Chr1	gffcl	locus	41657480	41658051	.	+	.	ID=RLOC_00007440;geneIDs=comp155235_c0_seq1.path1;transcripts=comp155235_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41657480	41658051	.	+	.	ID=comp155235_c0_seq1.mrna1;geneID=comp155235_c0_seq1.path1;Name=comp155235_c0_seq1;Dir=indeterminatecoverage=96.6;identity=93.6;matches=542;mismatches=27;indels=10;unknowns=0;Target=comp155235_c0_seq1 596 21 .;CDS_Target=comp155235_c0_seq1 290 225 .;locus=RLOC_00007440
Chr1	stalkie_big_nohaplotig	exon	41657480	41658051	93	+	.	Parent=comp155235_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	41657678	41657743	.	+	0	Parent=comp155235_c0_seq1.mrna1
Chr1	gffcl	locus	41658548	41658942	.	-	.	ID=RLOC_00007441;geneIDs=comp133036_c0_seq1.path1;transcripts=comp133036_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41658548	41658942	.	-	.	ID=comp133036_c0_seq1.mrna1;geneID=comp133036_c0_seq1.path1;Name=comp133036_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.5;matches=270;mismatches=21;indels=1;unknowns=0;locus=RLOC_00007441
Chr1	stalkie_big_nohaplotig	exon	41658548	41658634	97	-	.	Parent=comp133036_c0_seq1.mrna1;Target=comp133036_c0_seq1 291 205 .
Chr1	stalkie_big_nohaplotig	exon	41658738	41658942	90	-	.	Parent=comp133036_c0_seq1.mrna1;Target=comp133036_c0_seq1 204 1 .
Chr1	stalkie_big_nohaplotig	CDS	41658583	41658634	.	-	0	Parent=comp133036_c0_seq1.mrna1;Target=comp133036_c0_seq1 256 205 .
Chr1	stalkie_big_nohaplotig	CDS	41658738	41658875	.	-	0	Parent=comp133036_c0_seq1.mrna1;Target=comp133036_c0_seq1 204 68 .
Chr1	gffcl	locus	41665453	41665953	.	+	.	ID=RLOC_00007442;geneIDs=comp145504_c0_seq1.path1;transcripts=comp145504_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41665453	41665953	.	+	.	ID=comp145504_c0_seq1.mrna1;geneID=comp145504_c0_seq1.path1;Name=comp145504_c0_seq1;Dir=indeterminatecoverage=76.2;identity=97.1;matches=373;mismatches=11;indels=0;unknowns=0;Target=comp145504_c0_seq1 439 371 .;locus=RLOC_00007442
Chr1	stalkie_big_nohaplotig	exon	41665453	41665537	94	+	.	Parent=comp145504_c0_seq1.mrna1;Target=comp145504_c0_seq1 214 130 .
Chr1	stalkie_big_nohaplotig	exon	41665541	41665786	98	+	.	Parent=comp145504_c0_seq1.mrna1;Target=comp145504_c0_seq1 472 227 .
Chr1	stalkie_big_nohaplotig	exon	41665826	41665829	100	+	.	Parent=comp145504_c0_seq1.mrna1;Target=comp145504_c0_seq1 493 490 .
Chr1	stalkie_big_nohaplotig	exon	41665905	41665953	95	+	.	Parent=comp145504_c0_seq1.mrna1;Target=comp145504_c0_seq1 542 494 .
Chr1	stalkie_big_nohaplotig	CDS	41665685	41665753	.	+	0	Parent=comp145504_c0_seq1.mrna1
Chr1	gffcl	locus	41675198	41675777	.	-	.	ID=RLOC_00007443;geneIDs=comp141749_c0_seq1.path1;transcripts=comp141749_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41675198	41675777	.	-	.	ID=comp141749_c0_seq1.mrna1;geneID=comp141749_c0_seq1.path1;Name=comp141749_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.7;matches=578;mismatches=2;indels=0;unknowns=0;Target=comp141749_c0_seq1 586 7 .;CDS_Target=comp141749_c0_seq1 419 291 .;locus=RLOC_00007443
Chr1	stalkie_big_nohaplotig	exon	41675198	41675777	99	-	.	Parent=comp141749_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	41675365	41675493	.	-	0	Parent=comp141749_c0_seq1.mrna1
Chr1	gffcl	locus	41678671	41679626	.	-	.	ID=RLOC_00007444;geneIDs=comp147716_c0_seq1.path1;transcripts=comp147716_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41678671	41679626	.	-	.	ID=comp147716_c0_seq1.mrna1;geneID=comp147716_c0_seq1.path1;Name=comp147716_c0_seq1;Dir=indeterminatecoverage=97.9;identity=93.0;matches=889;mismatches=25;indels=42;unknowns=0;Target=comp147716_c0_seq1 934 21 .;CDS_Target=comp147716_c0_seq1 933 844 .;locus=RLOC_00007444
Chr1	stalkie_big_nohaplotig	exon	41678671	41679626	92	-	.	Parent=comp147716_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	41678672	41678761	.	-	0	Parent=comp147716_c0_seq1.mrna1
Chr1	gffcl	locus	41681410	41682635	.	-	.	ID=RLOC_00007445;geneIDs=comp160099_c1_seq1.path1;transcripts=comp160099_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41681410	41682635	.	-	.	ID=comp160099_c1_seq1.mrna1;geneID=comp160099_c1_seq1.path1;Name=comp160099_c1_seq1;Dir=indeterminatecoverage=99.8;identity=93.1;matches=1167;mismatches=47;indels=39;unknowns=0;Target=comp160099_c1_seq1 1241 1 .;CDS_Target=comp160099_c1_seq1 668 570 .;locus=RLOC_00007445
Chr1	stalkie_big_nohaplotig	exon	41681410	41682635	93	-	.	Parent=comp160099_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	41681980	41682078	.	-	0	Parent=comp160099_c1_seq1.mrna1
Chr1	gffcl	locus	41813394	41813871	.	+	.	ID=RLOC_00007448;geneIDs=comp157122_c0_seq1.path3;transcripts=comp157122_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	41813394	41813871	.	+	.	ID=comp157122_c0_seq1.mrna3;geneID=comp157122_c0_seq1.path3;Name=comp157122_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=472;mismatches=6;indels=2;unknowns=0;Target=comp157122_c0_seq1 480 1 .;CDS_Target=comp157122_c0_seq1 480 244 .;locus=RLOC_00007448
Chr1	stalkie_big_nohaplotig	exon	41813394	41813871	98	+	.	Parent=comp157122_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	41813635	41813871	.	+	0	Parent=comp157122_c0_seq1.mrna3
Chr1	gffcl	locus	41826738	41827906	.	+	.	ID=RLOC_00007449;geneIDs=comp147948_c0_seq1.path1;transcripts=comp147948_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41826738	41827906	.	+	.	ID=comp147948_c0_seq1.mrna1;geneID=comp147948_c0_seq1.path1;Name=comp147948_c0_seq1;Dir=sensecoverage=99.1;identity=99.2;matches=983;mismatches=5;indels=3;unknowns=0;Target=comp147948_c0_seq1 375 701 +;locus=RLOC_00007449
Chr1	stalkie_big_nohaplotig	exon	41826738	41826990	99	+	.	Parent=comp147948_c0_seq1.mrna1;Target=comp147948_c0_seq1 2 254 +
Chr1	stalkie_big_nohaplotig	exon	41827111	41827632	98	+	.	Parent=comp147948_c0_seq1.mrna1;Target=comp147948_c0_seq1 255 779 +
Chr1	stalkie_big_nohaplotig	exon	41827694	41827906	100	+	.	Parent=comp147948_c0_seq1.mrna1;Target=comp147948_c0_seq1 780 992 +
Chr1	stalkie_big_nohaplotig	CDS	41827231	41827557	.	+	0	Parent=comp147948_c0_seq1.mrna1
Chr1	gffcl	locus	41843095	41843308	.	-	.	ID=RLOC_00007450;geneIDs=FBgn0035290.1.path1;transcripts=FBgn0035290.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41843095	41843308	.	-	.	ID=FBgn0035290.1.mrna1;geneID=FBgn0035290.1.path1;Name=FBgn0035290.1;Dir=indeterminatecoverage=11.9;identity=100.0;matches=214;mismatches=0;indels=0;unknowns=0;Target=FBgn0035290.1 214 1 .;locus=RLOC_00007450
Chr1	stalkie_big_nohaplotig	exon	41843095	41843308	100	-	.	Parent=FBgn0035290.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	41843095	41843308	.	-	0	Parent=FBgn0035290.1.mrna1
Chr1	gffcl	locus	41888765	41889062	.	-	.	ID=RLOC_00007451;geneIDs=FBgn0003997.1.path1;transcripts=FBgn0003997.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41888765	41889062	.	-	.	ID=FBgn0003997.1.mrna1;geneID=FBgn0003997.1.path1;Name=FBgn0003997.1;Dir=indeterminatecoverage=30.3;identity=99.7;matches=297;mismatches=1;indels=0;unknowns=0;Target=FBgn0003997.1 298 1 .;locus=RLOC_00007451
Chr1	stalkie_big_nohaplotig	exon	41888765	41889062	99	-	.	Parent=FBgn0003997.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	41888765	41889062	.	-	0	Parent=FBgn0003997.1.mrna1
Chr1	gffcl	locus	41974372	42211813	.	-	.	ID=RLOC_00007452;geneIDs=FBgn0002563.1.path1,comp144281_c0_seq1.path1,comp163726_c0_seq1.path1;transcripts=comp163726_c0_seq1.mrna1,FBgn0002563.1.mrna1,comp144281_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	41974372	42211813	.	-	.	ID=comp163726_c0_seq1.mrna1;geneID=comp163726_c0_seq1.path1;Name=comp163726_c0_seq1;Dir=indeterminatecoverage=79.6;identity=87.5;matches=2274;mismatches=123;indels=202;unknowns=0;locus=RLOC_00007452
Chr1	stalkie_big_nohaplotig	exon	41974372	41976277	98	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 3204 1299 .
Chr1	stalkie_big_nohaplotig	exon	41999299	41999301	100	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1298 1296 .
Chr1	stalkie_big_nohaplotig	exon	42005198	42005204	100	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1295 1289 .
Chr1	stalkie_big_nohaplotig	exon	42019698	42019703	100	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1288 1283 .
Chr1	stalkie_big_nohaplotig	exon	42024601	42024603	100	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1282 1280 .
Chr1	stalkie_big_nohaplotig	exon	42025081	42025089	100	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1279 1271 .
Chr1	stalkie_big_nohaplotig	exon	42033184	42033215	57	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1270 1231 .
Chr1	stalkie_big_nohaplotig	exon	42044760	42044821	46	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1215 1160 .
Chr1	stalkie_big_nohaplotig	exon	42046082	42046089	100	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1148 1141 .
Chr1	stalkie_big_nohaplotig	exon	42056904	42056915	100	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1134 1123 .
Chr1	stalkie_big_nohaplotig	exon	42083898	42083902	100	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1122 1118 .
Chr1	stalkie_big_nohaplotig	exon	42084093	42084104	83	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1117 1106 .
Chr1	stalkie_big_nohaplotig	exon	42085706	42085714	100	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1105 1097 .
Chr1	stalkie_big_nohaplotig	exon	42091522	42091577	12	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1096 1090 .
Chr1	stalkie_big_nohaplotig	exon	42094882	42094883	100	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1089 1088 .
Chr1	stalkie_big_nohaplotig	exon	42108270	42108275	100	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1087 1082 .
Chr1	stalkie_big_nohaplotig	exon	42116325	42116328	100	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1081 1078 .
Chr1	stalkie_big_nohaplotig	exon	42121034	42121037	100	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1077 1074 .
Chr1	stalkie_big_nohaplotig	exon	42122109	42122155	58	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1056 1016 .
Chr1	stalkie_big_nohaplotig	exon	42147865	42147916	58	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1015 970 .
Chr1	stalkie_big_nohaplotig	exon	42152591	42152607	47	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 969 962 .
Chr1	stalkie_big_nohaplotig	exon	42152878	42152891	85	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 961 950 .
Chr1	stalkie_big_nohaplotig	exon	42154873	42154897	48	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 949 936 .
Chr1	stalkie_big_nohaplotig	exon	42161814	42161859	47	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 935 867 .
Chr1	stalkie_big_nohaplotig	exon	42165224	42165263	61	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 866 828 .
Chr1	stalkie_big_nohaplotig	exon	42168589	42168595	50	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 827 820 .
Chr1	stalkie_big_nohaplotig	exon	42175972	42175993	72	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 804 789 .
Chr1	stalkie_big_nohaplotig	exon	42187609	42187619	90	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 788 778 .
Chr1	stalkie_big_nohaplotig	exon	42194487	42194520	35	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 777 711 .
Chr1	stalkie_big_nohaplotig	exon	42195501	42195504	100	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 710 707 .
Chr1	stalkie_big_nohaplotig	exon	42201854	42201881	53	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 706 666 .
Chr1	stalkie_big_nohaplotig	exon	42211803	42211813	90	-	.	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 665 655 .
Chr1	stalkie_big_nohaplotig	CDS	41974377	41976277	.	-	2	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 3199 1299 .
Chr1	stalkie_big_nohaplotig	CDS	41999299	41999301	.	-	2	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1298 1296 .
Chr1	stalkie_big_nohaplotig	CDS	42005198	42005204	.	-	0	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1295 1289 .
Chr1	stalkie_big_nohaplotig	CDS	42019698	42019703	.	-	0	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1288 1283 .
Chr1	stalkie_big_nohaplotig	CDS	42024601	42024603	.	-	0	Parent=comp163726_c0_seq1.mrna1;Target=comp163726_c0_seq1 1282 1280 .
Chr1	stalkie_big_nohaplotig	mRNA	41974380	41976954	.	-	.	ID=FBgn0002563.1.mrna1;geneID=FBgn0002563.1.path1;Name=FBgn0002563.1;Dir=sensecoverage=100.0;identity=98.7;matches=2081;mismatches=28;indels=0;unknowns=0;locus=RLOC_00007452
Chr1	stalkie_big_nohaplotig	exon	41974380	41976311	98	-	.	Parent=FBgn0002563.1.mrna1;Target=FBgn0002563.1 178 2109 +
Chr1	stalkie_big_nohaplotig	exon	41976367	41976494	99	-	.	Parent=FBgn0002563.1.mrna1;Target=FBgn0002563.1 50 177 +
Chr1	stalkie_big_nohaplotig	exon	41976906	41976954	95	-	.	Parent=FBgn0002563.1.mrna1;Target=FBgn0002563.1 1 49 +
Chr1	stalkie_big_nohaplotig	CDS	41974380	41976311	.	-	0	Parent=FBgn0002563.1.mrna1;Target=FBgn0002563.1 178 2109 +
Chr1	stalkie_big_nohaplotig	CDS	41976367	41976494	.	-	2	Parent=FBgn0002563.1.mrna1;Target=FBgn0002563.1 50 177 +
Chr1	stalkie_big_nohaplotig	CDS	41976906	41976954	.	-	0	Parent=FBgn0002563.1.mrna1;Target=FBgn0002563.1 1 49 +
Chr1	stalkie_big_nohaplotig	mRNA	42083694	42084114	.	-	.	ID=comp144281_c0_seq1.mrna1;geneID=comp144281_c0_seq1.path1;Name=comp144281_c0_seq1;Dir=indeterminatecoverage=99.1;identity=84.1;matches=382;mismatches=30;indels=42;unknowns=0;Target=comp144281_c0_seq1 448 4 .;CDS_Target=comp144281_c0_seq1 194 6 .;locus=RLOC_00007452
Chr1	stalkie_big_nohaplotig	exon	42083694	42084114	84	-	.	Parent=comp144281_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	42083948	42084112	.	-	0	Parent=comp144281_c0_seq1.mrna1
Chr1	gffcl	locus	42071826	42074216	.	-	.	ID=RLOC_00007453;geneIDs=FBgn0004584.1.path1;transcripts=FBgn0004584.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	42071826	42074216	.	-	.	ID=FBgn0004584.1.mrna1;geneID=FBgn0004584.1.path1;Name=FBgn0004584.1;Dir=sensecoverage=100.0;identity=99.7;matches=2334;mismatches=6;indels=0;unknowns=0;locus=RLOC_00007453
Chr1	stalkie_big_nohaplotig	exon	42071826	42073955	99	-	.	Parent=FBgn0004584.1.mrna1;Target=FBgn0004584.1 211 2340 +
Chr1	stalkie_big_nohaplotig	exon	42074007	42074216	100	-	.	Parent=FBgn0004584.1.mrna1;Target=FBgn0004584.1 1 210 +
Chr1	stalkie_big_nohaplotig	CDS	42071826	42073955	.	-	0	Parent=FBgn0004584.1.mrna1;Target=FBgn0004584.1 211 2340 +
Chr1	stalkie_big_nohaplotig	CDS	42074007	42074216	.	-	0	Parent=FBgn0004584.1.mrna1;Target=FBgn0004584.1 1 210 +
Chr1	gffcl	locus	42086068	42086625	.	-	.	ID=RLOC_00007454;geneIDs=comp154884_c0_seq1.path1;transcripts=comp154884_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	42086068	42086625	.	-	.	ID=comp154884_c0_seq1.mrna1;geneID=comp154884_c0_seq1.path1;Name=comp154884_c0_seq1;Dir=indeterminatecoverage=99.8;identity=96.1;matches=549;mismatches=9;indels=13;unknowns=0;Target=comp154884_c0_seq1 571 1 .;CDS_Target=comp154884_c0_seq1 106 2 .;locus=RLOC_00007454
Chr1	stalkie_big_nohaplotig	exon	42086068	42086625	96	-	.	Parent=comp154884_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	42086525	42086624	.	-	0	Parent=comp154884_c0_seq1.mrna1
Chr1	gffcl	locus	42093869	42094651	.	+	.	ID=RLOC_00007455;geneIDs=ORF2970.path1;transcripts=ORF2970.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	42093869	42094651	.	+	.	ID=ORF2970.mrna1;geneID=ORF2970.path1;Name=ORF2970;Dir=indeterminatecoverage=100.0;identity=99.6;matches=780;mismatches=3;indels=0;unknowns=0;Target=ORF2970 783 1 .;locus=RLOC_00007455
Chr1	stalkie_big_nohaplotig	exon	42093869	42094651	99	+	.	Parent=ORF2970.mrna1
Chr1	stalkie_big_nohaplotig	CDS	42093869	42094651	.	+	0	Parent=ORF2970.mrna1
Chr1	gffcl	locus	42156166	42158074	.	-	.	ID=RLOC_00007456;geneIDs=FBgn0035900.2.path1;transcripts=FBgn0035900.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	42156166	42158074	.	-	.	ID=FBgn0035900.2.mrna1;geneID=FBgn0035900.2.path1;Name=FBgn0035900.2;Dir=sensecoverage=100.0;identity=99.0;matches=1675;mismatches=17;indels=0;unknowns=0;locus=RLOC_00007456
Chr1	stalkie_big_nohaplotig	exon	42156166	42156528	99	-	.	Parent=FBgn0035900.2.mrna1;Target=FBgn0035900.2 1330 1692 +
Chr1	stalkie_big_nohaplotig	exon	42156611	42156806	100	-	.	Parent=FBgn0035900.2.mrna1;Target=FBgn0035900.2 1134 1329 +
Chr1	stalkie_big_nohaplotig	exon	42156877	42157338	99	-	.	Parent=FBgn0035900.2.mrna1;Target=FBgn0035900.2 672 1133 +
Chr1	stalkie_big_nohaplotig	exon	42157404	42158074	98	-	.	Parent=FBgn0035900.2.mrna1;Target=FBgn0035900.2 1 671 +
Chr1	stalkie_big_nohaplotig	CDS	42156166	42156528	.	-	0	Parent=FBgn0035900.2.mrna1;Target=FBgn0035900.2 1330 1692 +
Chr1	stalkie_big_nohaplotig	CDS	42156611	42156806	.	-	1	Parent=FBgn0035900.2.mrna1;Target=FBgn0035900.2 1134 1329 +
Chr1	stalkie_big_nohaplotig	CDS	42156877	42157338	.	-	1	Parent=FBgn0035900.2.mrna1;Target=FBgn0035900.2 672 1133 +
Chr1	stalkie_big_nohaplotig	CDS	42157404	42158074	.	-	0	Parent=FBgn0035900.2.mrna1;Target=FBgn0035900.2 1 671 +
Chr1	gffcl	locus	42181882	42182695	.	-	.	ID=RLOC_00007457;geneIDs=comp149456_c0_seq1.path1;transcripts=comp149456_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	42181882	42182695	.	-	.	ID=comp149456_c0_seq1.mrna1;geneID=comp149456_c0_seq1.path1;Name=comp149456_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=794;mismatches=14;indels=7;unknowns=0;Target=comp149456_c0_seq1 809 1 .;CDS_Target=comp149456_c0_seq1 545 423 .;locus=RLOC_00007457
Chr1	stalkie_big_nohaplotig	exon	42181882	42182695	97	-	.	Parent=comp149456_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	42182149	42182270	.	-	0	Parent=comp149456_c0_seq1.mrna1
Chr1	gffcl	locus	42182838	42184448	.	-	.	ID=RLOC_00007458;geneIDs=FBgn0036790.1.path1;transcripts=FBgn0036790.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	42182838	42184448	.	-	.	ID=FBgn0036790.1.mrna1;geneID=FBgn0036790.1.path1;Name=FBgn0036790.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1608;mismatches=3;indels=0;unknowns=0;Target=FBgn0036790.1 1611 1 .;locus=RLOC_00007458
Chr1	stalkie_big_nohaplotig	exon	42182838	42184448	99	-	.	Parent=FBgn0036790.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	42182838	42184448	.	-	0	Parent=FBgn0036790.1.mrna1
Chr1	gffcl	locus	42261564	42268173	.	+	.	ID=RLOC_00007459;geneIDs=FBgn0261439.1.path1;transcripts=FBgn0261439.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	42261564	42268173	.	+	.	ID=FBgn0261439.1.mrna1;geneID=FBgn0261439.1.path1;Name=FBgn0261439.1;Dir=sensecoverage=100.0;identity=99.5;matches=2071;mismatches=11;indels=0;unknowns=0;locus=RLOC_00007459
Chr1	stalkie_big_nohaplotig	exon	42261564	42261638	97	+	.	Parent=FBgn0261439.1.mrna1;Target=FBgn0261439.1 1 75 +
Chr1	stalkie_big_nohaplotig	exon	42266167	42268173	99	+	.	Parent=FBgn0261439.1.mrna1;Target=FBgn0261439.1 76 2082 +
Chr1	stalkie_big_nohaplotig	CDS	42261564	42261638	.	+	0	Parent=FBgn0261439.1.mrna1;Target=FBgn0261439.1 1 75 +
Chr1	stalkie_big_nohaplotig	CDS	42266167	42268173	.	+	0	Parent=FBgn0261439.1.mrna1;Target=FBgn0261439.1 76 2082 +
Chr1	gffcl	locus	42275508	42277130	.	+	.	ID=RLOC_00007460;geneIDs=FBgn0029996.5.path1;transcripts=FBgn0029996.5.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	42275508	42277130	.	+	.	ID=FBgn0029996.5.mrna1;geneID=FBgn0029996.5.path1;Name=FBgn0029996.5;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1383;mismatches=6;indels=0;unknowns=0;locus=RLOC_00007460
Chr1	stalkie_big_nohaplotig	exon	42275508	42276669	99	+	.	Parent=FBgn0029996.5.mrna1;Target=FBgn0029996.5 1162 1 .
Chr1	stalkie_big_nohaplotig	exon	42276904	42277130	98	+	.	Parent=FBgn0029996.5.mrna1;Target=FBgn0029996.5 1389 1163 .
Chr1	stalkie_big_nohaplotig	CDS	42275508	42276669	.	+	0	Parent=FBgn0029996.5.mrna1;Target=FBgn0029996.5 1162 1 .
Chr1	stalkie_big_nohaplotig	CDS	42276904	42277130	.	+	2	Parent=FBgn0029996.5.mrna1;Target=FBgn0029996.5 1389 1163 .
Chr1	gffcl	locus	42390591	42391608	.	+	.	ID=RLOC_00007461;geneIDs=comp162356_c1_seq1.path6;transcripts=comp162356_c1_seq1.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	42390591	42391608	.	+	.	ID=comp162356_c1_seq1.mrna6;geneID=comp162356_c1_seq1.path6;Name=comp162356_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1014;mismatches=4;indels=0;unknowns=0;Target=comp162356_c1_seq1 1018 1 .;CDS_Target=comp162356_c1_seq1 1017 1 .;locus=RLOC_00007461
Chr1	stalkie_big_nohaplotig	exon	42390591	42391608	99	+	.	Parent=comp162356_c1_seq1.mrna6
Chr1	stalkie_big_nohaplotig	CDS	42390591	42391607	.	+	0	Parent=comp162356_c1_seq1.mrna6
Chr1	gffcl	locus	42420330	42429097	.	+	.	ID=RLOC_00007462;geneIDs=FBgn0003997.1.path2;transcripts=FBgn0003997.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	42420330	42429097	.	+	.	ID=FBgn0003997.1.mrna2;geneID=FBgn0003997.1.path2;Name=FBgn0003997.1;Dir=sensecoverage=69.7;identity=99.7;matches=685;mismatches=1;indels=1;unknowns=0;locus=RLOC_00007462
Chr1	stalkie_big_nohaplotig	exon	42420330	42420753	99	+	.	Parent=FBgn0003997.1.mrna2;Target=FBgn0003997.1 299 722 +
Chr1	stalkie_big_nohaplotig	exon	42421971	42422157	100	+	.	Parent=FBgn0003997.1.mrna2;Target=FBgn0003997.1 723 909 +
Chr1	stalkie_big_nohaplotig	exon	42429022	42429097	98	+	.	Parent=FBgn0003997.1.mrna2;Target=FBgn0003997.1 910 984 +
Chr1	stalkie_big_nohaplotig	CDS	42420330	42420753	.	+	1	Parent=FBgn0003997.1.mrna2;Target=FBgn0003997.1 299 722 +
Chr1	stalkie_big_nohaplotig	CDS	42421971	42422157	.	+	0	Parent=FBgn0003997.1.mrna2;Target=FBgn0003997.1 723 909 +
Chr1	stalkie_big_nohaplotig	CDS	42429022	42429097	.	+	2	Parent=FBgn0003997.1.mrna2;Target=FBgn0003997.1 910 984 +
Chr1	gffcl	locus	42434048	42434407	.	-	.	ID=RLOC_00007463;geneIDs=comp137378_c0_seq1.path1;transcripts=comp137378_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	42434048	42434407	.	-	.	ID=comp137378_c0_seq1.mrna1;geneID=comp137378_c0_seq1.path1;Name=comp137378_c0_seq1;Dir=indeterminatecoverage=97.6;identity=99.4;matches=359;mismatches=1;indels=1;unknowns=0;Target=comp137378_c0_seq1 361 1 .;CDS_Target=comp137378_c0_seq1 45 1 .;locus=RLOC_00007463
Chr1	stalkie_big_nohaplotig	exon	42434048	42434407	99	-	.	Parent=comp137378_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	42434363	42434407	.	-	0	Parent=comp137378_c0_seq1.mrna1
Chr1	gffcl	locus	42471911	42477868	.	+	.	ID=RLOC_00007464;geneIDs=FBgn0036781.1.path1;transcripts=FBgn0036781.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	42471911	42477868	.	+	.	ID=FBgn0036781.1.mrna1;geneID=FBgn0036781.1.path1;Name=FBgn0036781.1;Dir=sensecoverage=100.0;identity=99.5;matches=3103;mismatches=17;indels=0;unknowns=0;locus=RLOC_00007464
Chr1	stalkie_big_nohaplotig	exon	42471911	42472125	100	+	.	Parent=FBgn0036781.1.mrna1;Target=FBgn0036781.1 1 215 +
Chr1	stalkie_big_nohaplotig	exon	42474513	42476039	99	+	.	Parent=FBgn0036781.1.mrna1;Target=FBgn0036781.1 216 1742 +
Chr1	stalkie_big_nohaplotig	exon	42476341	42476461	100	+	.	Parent=FBgn0036781.1.mrna1;Target=FBgn0036781.1 1743 1863 +
Chr1	stalkie_big_nohaplotig	exon	42476612	42477868	98	+	.	Parent=FBgn0036781.1.mrna1;Target=FBgn0036781.1 1864 3120 +
Chr1	stalkie_big_nohaplotig	CDS	42471911	42472125	.	+	0	Parent=FBgn0036781.1.mrna1;Target=FBgn0036781.1 1 215 +
Chr1	stalkie_big_nohaplotig	CDS	42474513	42476039	.	+	1	Parent=FBgn0036781.1.mrna1;Target=FBgn0036781.1 216 1742 +
Chr1	stalkie_big_nohaplotig	CDS	42476341	42476461	.	+	1	Parent=FBgn0036781.1.mrna1;Target=FBgn0036781.1 1743 1863 +
Chr1	stalkie_big_nohaplotig	CDS	42476612	42477868	.	+	0	Parent=FBgn0036781.1.mrna1;Target=FBgn0036781.1 1864 3120 +
Chr1	gffcl	locus	42485460	42486133	.	-	.	ID=RLOC_00007465;geneIDs=comp156449_c0_seq1.path1;transcripts=comp156449_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	42485460	42486133	.	-	.	ID=comp156449_c0_seq1.mrna1;geneID=comp156449_c0_seq1.path1;Name=comp156449_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=669;mismatches=5;indels=5;unknowns=0;Target=comp156449_c0_seq1 679 1 .;CDS_Target=comp156449_c0_seq1 214 2 .;locus=RLOC_00007465
Chr1	stalkie_big_nohaplotig	exon	42485460	42486133	98	-	.	Parent=comp156449_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	42485920	42486132	.	-	0	Parent=comp156449_c0_seq1.mrna1
Chr1	gffcl	locus	42492714	42500557	.	+	.	ID=RLOC_00007467;geneIDs=FBgn0020300.1.path1;transcripts=FBgn0020300.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	42492714	42500557	.	+	.	ID=FBgn0020300.1.mrna1;geneID=FBgn0020300.1.path1;Name=FBgn0020300.1;Dir=sensecoverage=62.8;identity=99.4;matches=358;mismatches=2;indels=0;unknowns=30;locus=RLOC_00007467
Chr1	stalkie_big_nohaplotig	exon	42492714	42492744	100	+	.	Parent=FBgn0020300.1.mrna1;Target=FBgn0020300.1 232 262 +
Chr1	stalkie_big_nohaplotig	exon	42496672	42496846	99	+	.	Parent=FBgn0020300.1.mrna1;Target=FBgn0020300.1 263 437 +
Chr1	stalkie_big_nohaplotig	exon	42500374	42500557	99	+	.	Parent=FBgn0020300.1.mrna1;Target=FBgn0020300.1 438 621 +
Chr1	stalkie_big_nohaplotig	CDS	42492714	42492744	.	+	0	Parent=FBgn0020300.1.mrna1;Target=FBgn0020300.1 232 262 +
Chr1	stalkie_big_nohaplotig	CDS	42496672	42496846	.	+	2	Parent=FBgn0020300.1.mrna1;Target=FBgn0020300.1 263 437 +
Chr1	stalkie_big_nohaplotig	CDS	42500374	42500557	.	+	1	Parent=FBgn0020300.1.mrna1;Target=FBgn0020300.1 438 621 +
Chr1	gffcl	locus	42519575	42519756	.	+	.	ID=RLOC_00007468;geneIDs=FBgn0036780.1.path1;transcripts=FBgn0036780.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	42519575	42519756	.	+	.	ID=FBgn0036780.1.mrna1;geneID=FBgn0036780.1.path1;Name=FBgn0036780.1;Dir=indeterminatecoverage=48.1;identity=100.0;matches=182;mismatches=0;indels=0;unknowns=0;Target=FBgn0036780.1 227 46 .;locus=RLOC_00007468
Chr1	stalkie_big_nohaplotig	exon	42519575	42519756	100	+	.	Parent=FBgn0036780.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	42519575	42519756	.	+	0	Parent=FBgn0036780.1.mrna1
Chr1	gffcl	locus	42534477	42535519	.	-	.	ID=RLOC_00007469;geneIDs=comp155070_c0_seq1.path1;transcripts=comp155070_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	42534477	42535519	.	-	.	ID=comp155070_c0_seq1.mrna1;geneID=comp155070_c0_seq1.path1;Name=comp155070_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1042;mismatches=1;indels=0;unknowns=0;Target=comp155070_c0_seq1 1043 1 .;CDS_Target=comp155070_c0_seq1 457 230 .;locus=RLOC_00007469
Chr1	stalkie_big_nohaplotig	exon	42534477	42535519	99	-	.	Parent=comp155070_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	42535063	42535290	.	-	0	Parent=comp155070_c0_seq1.mrna1
Chr1	gffcl	locus	42590365	42591365	.	+	.	ID=RLOC_00007470;geneIDs=comp159108_c0_seq1.path1;transcripts=comp159108_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	42590365	42591365	.	+	.	ID=comp159108_c0_seq1.mrna1;geneID=comp159108_c0_seq1.path1;Name=comp159108_c0_seq1;Dir=antisensecoverage=97.2;identity=98.3;matches=928;mismatches=16;indels=0;unknowns=0;locus=RLOC_00007470
Chr1	stalkie_big_nohaplotig	exon	42590365	42590954	98	+	.	Parent=comp159108_c0_seq1.mrna1;Target=comp159108_c0_seq1 377 966 -
Chr1	stalkie_big_nohaplotig	exon	42591012	42591365	97	+	.	Parent=comp159108_c0_seq1.mrna1;Target=comp159108_c0_seq1 23 376 -
Chr1	stalkie_big_nohaplotig	CDS	42590366	42590954	.	+	0	Parent=comp159108_c0_seq1.mrna1;Target=comp159108_c0_seq1 377 965 .
Chr1	stalkie_big_nohaplotig	CDS	42591012	42591019	.	+	2	Parent=comp159108_c0_seq1.mrna1;Target=comp159108_c0_seq1 369 376 .
Chr1	gffcl	locus	42601559	42602559	.	+	.	ID=RLOC_00007471;geneIDs=comp159108_c0_seq1.path2;transcripts=comp159108_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	42601559	42602559	.	+	.	ID=comp159108_c0_seq1.mrna2;geneID=comp159108_c0_seq1.path2;Name=comp159108_c0_seq1;Dir=antisensecoverage=97.2;identity=98.3;matches=928;mismatches=16;indels=0;unknowns=0;locus=RLOC_00007471
Chr1	stalkie_big_nohaplotig	exon	42601559	42602148	98	+	.	Parent=comp159108_c0_seq1.mrna2;Target=comp159108_c0_seq1 377 966 -
Chr1	stalkie_big_nohaplotig	exon	42602206	42602559	97	+	.	Parent=comp159108_c0_seq1.mrna2;Target=comp159108_c0_seq1 23 376 -
Chr1	stalkie_big_nohaplotig	CDS	42601560	42602148	.	+	0	Parent=comp159108_c0_seq1.mrna2;Target=comp159108_c0_seq1 377 965 .
Chr1	stalkie_big_nohaplotig	CDS	42602206	42602213	.	+	2	Parent=comp159108_c0_seq1.mrna2;Target=comp159108_c0_seq1 369 376 .
Chr1	gffcl	locus	42632071	42632972	.	-	.	ID=RLOC_00007472;geneIDs=comp156679_c0_seq1.path1;transcripts=comp156679_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	42632071	42632972	.	-	.	ID=comp156679_c0_seq1.mrna1;geneID=comp156679_c0_seq1.path1;Name=comp156679_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=897;mismatches=5;indels=1;unknowns=0;Target=comp156679_c0_seq1 903 1 .;CDS_Target=comp156679_c0_seq1 101 63 .;locus=RLOC_00007472
Chr1	stalkie_big_nohaplotig	exon	42632071	42632972	99	-	.	Parent=comp156679_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	42632873	42632910	.	-	0	Parent=comp156679_c0_seq1.mrna1
Chr1	gffcl	locus	42647760	42648592	.	-	.	ID=RLOC_00007473;geneIDs=FBgn0034654.4.path1;transcripts=FBgn0034654.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	42647760	42648592	.	-	.	ID=FBgn0034654.4.mrna1;geneID=FBgn0034654.4.path1;Name=FBgn0034654.4;Dir=sensecoverage=100.0;identity=99.7;matches=709;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007473
Chr1	stalkie_big_nohaplotig	exon	42647760	42647890	100	-	.	Parent=FBgn0034654.4.mrna1;Target=FBgn0034654.4 581 711 +
Chr1	stalkie_big_nohaplotig	exon	42647952	42648388	99	-	.	Parent=FBgn0034654.4.mrna1;Target=FBgn0034654.4 144 580 +
Chr1	stalkie_big_nohaplotig	exon	42648450	42648592	99	-	.	Parent=FBgn0034654.4.mrna1;Target=FBgn0034654.4 1 143 +
Chr1	stalkie_big_nohaplotig	CDS	42647760	42647890	.	-	2	Parent=FBgn0034654.4.mrna1;Target=FBgn0034654.4 581 711 +
Chr1	stalkie_big_nohaplotig	CDS	42647952	42648388	.	-	1	Parent=FBgn0034654.4.mrna1;Target=FBgn0034654.4 144 580 +
Chr1	stalkie_big_nohaplotig	CDS	42648450	42648592	.	-	0	Parent=FBgn0034654.4.mrna1;Target=FBgn0034654.4 1 143 +
Chr1	gffcl	locus	42690614	42694981	.	-	.	ID=RLOC_00007474;geneIDs=FBgn0052196.2.path1;transcripts=FBgn0052196.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	42690614	42694981	.	-	.	ID=FBgn0052196.2.mrna1;geneID=FBgn0052196.2.path1;Name=FBgn0052196.2;Dir=sensecoverage=100.0;identity=98.3;matches=634;mismatches=11;indels=0;unknowns=0;locus=RLOC_00007474
Chr1	stalkie_big_nohaplotig	exon	42690614	42690932	98	-	.	Parent=FBgn0052196.2.mrna1;Target=FBgn0052196.2 327 645 +
Chr1	stalkie_big_nohaplotig	exon	42691422	42691555	99	-	.	Parent=FBgn0052196.2.mrna1;Target=FBgn0052196.2 193 326 +
Chr1	stalkie_big_nohaplotig	exon	42692734	42692854	96	-	.	Parent=FBgn0052196.2.mrna1;Target=FBgn0052196.2 72 192 +
Chr1	stalkie_big_nohaplotig	exon	42694911	42694981	97	-	.	Parent=FBgn0052196.2.mrna1;Target=FBgn0052196.2 1 71 +
Chr1	stalkie_big_nohaplotig	CDS	42690614	42690932	.	-	1	Parent=FBgn0052196.2.mrna1;Target=FBgn0052196.2 327 645 +
Chr1	stalkie_big_nohaplotig	CDS	42691422	42691555	.	-	0	Parent=FBgn0052196.2.mrna1;Target=FBgn0052196.2 193 326 +
Chr1	stalkie_big_nohaplotig	CDS	42692734	42692854	.	-	1	Parent=FBgn0052196.2.mrna1;Target=FBgn0052196.2 72 192 +
Chr1	stalkie_big_nohaplotig	CDS	42694911	42694981	.	-	0	Parent=FBgn0052196.2.mrna1;Target=FBgn0052196.2 1 71 +
Chr1	gffcl	locus	42854597	42854989	.	-	.	ID=RLOC_00007476;geneIDs=comp157725_c0_seq1.path1;transcripts=comp157725_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	42854597	42854989	.	-	.	ID=comp157725_c0_seq1.mrna1;geneID=comp157725_c0_seq1.path1;Name=comp157725_c0_seq1;Dir=indeterminatecoverage=59.8;identity=89.8;matches=354;mismatches=28;indels=12;unknowns=0;Target=comp157725_c0_seq1 383 1 .;CDS_Target=comp157725_c0_seq1 201 187 .;locus=RLOC_00007476
Chr1	stalkie_big_nohaplotig	exon	42854597	42854989	89	-	.	Parent=comp157725_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	42854779	42854793	.	-	0	Parent=comp157725_c0_seq1.mrna1
Chr1	gffcl	locus	42910197	42910270	.	+	.	ID=RLOC_00007477;geneIDs=comp155669_c1_seq1.path2;transcripts=comp155669_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	42910197	42910270	.	+	.	ID=comp155669_c1_seq1.mrna2;geneID=comp155669_c1_seq1.path2;Name=comp155669_c1_seq1;Dir=indeterminatecoverage=4.3;identity=100.0;matches=74;mismatches=0;indels=0;unknowns=0;Target=comp155669_c1_seq1 1722 1649 .;locus=RLOC_00007477
Chr1	stalkie_big_nohaplotig	exon	42910197	42910270	100	+	.	Parent=comp155669_c1_seq1.mrna2
Chr1	gffcl	locus	42990609	42994234	.	-	.	ID=RLOC_00007478;geneIDs=ORF2587.path1;transcripts=ORF2587.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	42990609	42994234	.	-	.	ID=ORF2587.mrna1;geneID=ORF2587.path1;Name=ORF2587;Dir=sensecoverage=100.0;identity=99.8;matches=835;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007478
Chr1	stalkie_big_nohaplotig	exon	42990609	42991196	99	-	.	Parent=ORF2587.mrna1;Target=ORF2587 250 837 +
Chr1	stalkie_big_nohaplotig	exon	42993790	42993902	100	-	.	Parent=ORF2587.mrna1;Target=ORF2587 137 249 +
Chr1	stalkie_big_nohaplotig	exon	42994099	42994234	100	-	.	Parent=ORF2587.mrna1;Target=ORF2587 1 136 +
Chr1	stalkie_big_nohaplotig	CDS	42990609	42991196	.	-	0	Parent=ORF2587.mrna1;Target=ORF2587 250 837 +
Chr1	stalkie_big_nohaplotig	CDS	42993790	42993902	.	-	2	Parent=ORF2587.mrna1;Target=ORF2587 137 249 +
Chr1	stalkie_big_nohaplotig	CDS	42994099	42994234	.	-	0	Parent=ORF2587.mrna1;Target=ORF2587 1 136 +
Chr1	gffcl	locus	43023780	43024850	.	-	.	ID=RLOC_00007479;geneIDs=FBgn0029996.7.path1;transcripts=FBgn0029996.7.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43023780	43024850	.	-	.	ID=FBgn0029996.7.mrna1;geneID=FBgn0029996.7.path1;Name=FBgn0029996.7;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1066;mismatches=5;indels=0;unknowns=0;Target=FBgn0029996.7 1071 1 .;locus=RLOC_00007479
Chr1	stalkie_big_nohaplotig	exon	43023780	43024850	99	-	.	Parent=FBgn0029996.7.mrna1
Chr1	stalkie_big_nohaplotig	CDS	43023780	43024850	.	-	0	Parent=FBgn0029996.7.mrna1
Chr1	gffcl	locus	43036177	43037397	.	+	.	ID=RLOC_00007480;geneIDs=FBgn0029996.6.path1;transcripts=FBgn0029996.6.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43036177	43037397	.	+	.	ID=FBgn0029996.6.mrna1;geneID=FBgn0029996.6.path1;Name=FBgn0029996.6;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1216;mismatches=5;indels=6;unknowns=0;Target=FBgn0029996.6 1227 1 .;locus=RLOC_00007480
Chr1	stalkie_big_nohaplotig	exon	43036177	43037397	99	+	.	Parent=FBgn0029996.6.mrna1
Chr1	stalkie_big_nohaplotig	CDS	43036177	43037397	.	+	0	Parent=FBgn0029996.6.mrna1
Chr1	gffcl	locus	43076580	43079059	.	-	.	ID=RLOC_00007481;geneIDs=FBgn0005411.3.path1;transcripts=FBgn0005411.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43076580	43079059	.	-	.	ID=FBgn0005411.3.mrna1;geneID=FBgn0005411.3.path1;Name=FBgn0005411.3;Dir=sensecoverage=100.0;identity=99.5;matches=1233;mismatches=6;indels=0;unknowns=0;locus=RLOC_00007481
Chr1	stalkie_big_nohaplotig	exon	43076580	43077041	100	-	.	Parent=FBgn0005411.3.mrna1;Target=FBgn0005411.3 778 1239 +
Chr1	stalkie_big_nohaplotig	exon	43077102	43077224	97	-	.	Parent=FBgn0005411.3.mrna1;Target=FBgn0005411.3 655 777 +
Chr1	stalkie_big_nohaplotig	exon	43078206	43078294	100	-	.	Parent=FBgn0005411.3.mrna1;Target=FBgn0005411.3 566 654 +
Chr1	stalkie_big_nohaplotig	exon	43078369	43078917	99	-	.	Parent=FBgn0005411.3.mrna1;Target=FBgn0005411.3 17 565 +
Chr1	stalkie_big_nohaplotig	exon	43079044	43079059	100	-	.	Parent=FBgn0005411.3.mrna1;Target=FBgn0005411.3 1 16 +
Chr1	stalkie_big_nohaplotig	CDS	43076580	43077041	.	-	0	Parent=FBgn0005411.3.mrna1;Target=FBgn0005411.3 778 1239 +
Chr1	stalkie_big_nohaplotig	CDS	43077102	43077224	.	-	0	Parent=FBgn0005411.3.mrna1;Target=FBgn0005411.3 655 777 +
Chr1	stalkie_big_nohaplotig	CDS	43078206	43078294	.	-	2	Parent=FBgn0005411.3.mrna1;Target=FBgn0005411.3 566 654 +
Chr1	stalkie_big_nohaplotig	CDS	43078369	43078917	.	-	2	Parent=FBgn0005411.3.mrna1;Target=FBgn0005411.3 17 565 +
Chr1	stalkie_big_nohaplotig	CDS	43079044	43079059	.	-	0	Parent=FBgn0005411.3.mrna1;Target=FBgn0005411.3 1 16 +
Chr1	gffcl	locus	43080945	43083559	.	+	.	ID=RLOC_00007482;geneIDs=FBgn0005411.1.path1;transcripts=FBgn0005411.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43080945	43083559	.	+	.	ID=FBgn0005411.1.mrna1;geneID=FBgn0005411.1.path1;Name=FBgn0005411.1;Dir=sensecoverage=100.0;identity=99.9;matches=1235;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007482
Chr1	stalkie_big_nohaplotig	exon	43080945	43080969	100	+	.	Parent=FBgn0005411.1.mrna1;Target=FBgn0005411.1 1 25 +
Chr1	stalkie_big_nohaplotig	exon	43081138	43081680	99	+	.	Parent=FBgn0005411.1.mrna1;Target=FBgn0005411.1 26 568 +
Chr1	stalkie_big_nohaplotig	exon	43081743	43081831	100	+	.	Parent=FBgn0005411.1.mrna1;Target=FBgn0005411.1 569 657 +
Chr1	stalkie_big_nohaplotig	exon	43082860	43082982	100	+	.	Parent=FBgn0005411.1.mrna1;Target=FBgn0005411.1 658 780 +
Chr1	stalkie_big_nohaplotig	exon	43083042	43083158	100	+	.	Parent=FBgn0005411.1.mrna1;Target=FBgn0005411.1 781 897 +
Chr1	stalkie_big_nohaplotig	exon	43083221	43083559	100	+	.	Parent=FBgn0005411.1.mrna1;Target=FBgn0005411.1 898 1236 +
Chr1	stalkie_big_nohaplotig	CDS	43080945	43080969	.	+	0	Parent=FBgn0005411.1.mrna1;Target=FBgn0005411.1 1 25 +
Chr1	stalkie_big_nohaplotig	CDS	43081138	43081680	.	+	2	Parent=FBgn0005411.1.mrna1;Target=FBgn0005411.1 26 568 +
Chr1	stalkie_big_nohaplotig	CDS	43081743	43081831	.	+	2	Parent=FBgn0005411.1.mrna1;Target=FBgn0005411.1 569 657 +
Chr1	stalkie_big_nohaplotig	CDS	43082860	43082982	.	+	0	Parent=FBgn0005411.1.mrna1;Target=FBgn0005411.1 658 780 +
Chr1	stalkie_big_nohaplotig	CDS	43083042	43083158	.	+	0	Parent=FBgn0005411.1.mrna1;Target=FBgn0005411.1 781 897 +
Chr1	stalkie_big_nohaplotig	CDS	43083221	43083559	.	+	0	Parent=FBgn0005411.1.mrna1;Target=FBgn0005411.1 898 1236 +
Chr1	gffcl	locus	43085221	43104183	.	.	.	ID=RLOC_00007483;geneIDs=FBgn0011571.1.path1,comp146582_c0_seq1.path1,comp161714_c1_seq1.path1;transcripts=comp146582_c0_seq1.mrna1,FBgn0011571.1.mrna1,comp161714_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43085221	43100434	.	+	.	ID=comp146582_c0_seq1.mrna1;geneID=comp146582_c0_seq1.path1;Name=comp146582_c0_seq1;Dir=indeterminatecoverage=91.3;identity=96.2;matches=635;mismatches=23;indels=2;unknowns=0;Target=comp146582_c0_seq1 484 404 .;locus=RLOC_00007483
Chr1	stalkie_big_nohaplotig	exon	43085221	43085353	92	+	.	Parent=comp146582_c0_seq1.mrna1;Target=comp146582_c0_seq1 132 1 .
Chr1	stalkie_big_nohaplotig	exon	43085496	43086009	97	+	.	Parent=comp146582_c0_seq1.mrna1;Target=comp146582_c0_seq1 647 133 .
Chr1	stalkie_big_nohaplotig	exon	43090368	43090369	100	+	.	Parent=comp146582_c0_seq1.mrna1;Target=comp146582_c0_seq1 649 648 .
Chr1	stalkie_big_nohaplotig	exon	43100425	43100434	100	+	.	Parent=comp146582_c0_seq1.mrna1;Target=comp146582_c0_seq1 659 650 .
Chr1	stalkie_big_nohaplotig	CDS	43085767	43085847	.	+	0	Parent=comp146582_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43093939	43104183	.	+	.	ID=FBgn0011571.1.mrna1;geneID=FBgn0011571.1.path1;Name=FBgn0011571.1;Dir=sensecoverage=97.2;identity=98.8;matches=746;mismatches=5;indels=4;unknowns=0;locus=RLOC_00007483
Chr1	stalkie_big_nohaplotig	exon	43093939	43094004	98	+	.	Parent=FBgn0011571.1.mrna1;Target=FBgn0011571.1 1 67 +
Chr1	stalkie_big_nohaplotig	exon	43094061	43094204	99	+	.	Parent=FBgn0011571.1.mrna1;Target=FBgn0011571.1 68 211 +
Chr1	stalkie_big_nohaplotig	exon	43094295	43094370	100	+	.	Parent=FBgn0011571.1.mrna1;Target=FBgn0011571.1 212 287 +
Chr1	stalkie_big_nohaplotig	exon	43097942	43097976	100	+	.	Parent=FBgn0011571.1.mrna1;Target=FBgn0011571.1 288 322 +
Chr1	stalkie_big_nohaplotig	exon	43101738	43101880	100	+	.	Parent=FBgn0011571.1.mrna1;Target=FBgn0011571.1 323 465 +
Chr1	stalkie_big_nohaplotig	exon	43103897	43104183	97	+	.	Parent=FBgn0011571.1.mrna1;Target=FBgn0011571.1 466 755 +
Chr1	stalkie_big_nohaplotig	CDS	43093998	43094004	.	+	0	Parent=FBgn0011571.1.mrna1;Target=FBgn0011571.1 61 67 +
Chr1	stalkie_big_nohaplotig	CDS	43094061	43094204	.	+	2	Parent=FBgn0011571.1.mrna1;Target=FBgn0011571.1 68 211 +
Chr1	stalkie_big_nohaplotig	CDS	43094295	43094370	.	+	2	Parent=FBgn0011571.1.mrna1;Target=FBgn0011571.1 212 287 +
Chr1	stalkie_big_nohaplotig	CDS	43097942	43097976	.	+	1	Parent=FBgn0011571.1.mrna1;Target=FBgn0011571.1 288 322 +
Chr1	stalkie_big_nohaplotig	CDS	43101738	43101880	.	+	2	Parent=FBgn0011571.1.mrna1;Target=FBgn0011571.1 323 465 +
Chr1	stalkie_big_nohaplotig	CDS	43103897	43104181	.	+	0	Parent=FBgn0011571.1.mrna1;Target=FBgn0011571.1 466 753 +
Chr1	stalkie_big_nohaplotig	mRNA	43097954	43100827	.	-	.	ID=comp161714_c1_seq1.mrna1;geneID=comp161714_c1_seq1.path1;Name=comp161714_c1_seq1;Dir=indeterminatecoverage=99.9;identity=99.4;matches=2869;mismatches=5;indels=12;unknowns=0;Target=comp161714_c1_seq1 2889 4 .;CDS_Target=comp161714_c1_seq1 1614 1405 .;locus=RLOC_00007483
Chr1	stalkie_big_nohaplotig	exon	43097954	43100827	99	-	.	Parent=comp161714_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	43099228	43099437	.	-	0	Parent=comp161714_c1_seq1.mrna1
Chr1	gffcl	locus	43086037	43092674	.	-	.	ID=RLOC_00007484;geneIDs=FBgn0086448.1.path1,comp152940_c1_seq1.path1;transcripts=comp152940_c1_seq1.mrna1,FBgn0086448.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43086037	43092674	.	-	.	ID=comp152940_c1_seq1.mrna1;geneID=comp152940_c1_seq1.path1;Name=comp152940_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=2453;mismatches=9;indels=0;unknowns=0;locus=RLOC_00007484
Chr1	stalkie_big_nohaplotig	exon	43086037	43086391	99	-	.	Parent=comp152940_c1_seq1.mrna1;Target=comp152940_c1_seq1 2462 2108 .
Chr1	stalkie_big_nohaplotig	exon	43086451	43086542	100	-	.	Parent=comp152940_c1_seq1.mrna1;Target=comp152940_c1_seq1 2107 2016 .
Chr1	stalkie_big_nohaplotig	exon	43086604	43086782	99	-	.	Parent=comp152940_c1_seq1.mrna1;Target=comp152940_c1_seq1 2015 1837 .
Chr1	stalkie_big_nohaplotig	exon	43086838	43086919	97	-	.	Parent=comp152940_c1_seq1.mrna1;Target=comp152940_c1_seq1 1836 1755 .
Chr1	stalkie_big_nohaplotig	exon	43089811	43089961	100	-	.	Parent=comp152940_c1_seq1.mrna1;Target=comp152940_c1_seq1 1754 1604 .
Chr1	stalkie_big_nohaplotig	exon	43090217	43090356	100	-	.	Parent=comp152940_c1_seq1.mrna1;Target=comp152940_c1_seq1 1603 1464 .
Chr1	stalkie_big_nohaplotig	exon	43090431	43090545	100	-	.	Parent=comp152940_c1_seq1.mrna1;Target=comp152940_c1_seq1 1463 1349 .
Chr1	stalkie_big_nohaplotig	exon	43091025	43091140	100	-	.	Parent=comp152940_c1_seq1.mrna1;Target=comp152940_c1_seq1 1348 1233 .
Chr1	stalkie_big_nohaplotig	exon	43091200	43091276	100	-	.	Parent=comp152940_c1_seq1.mrna1;Target=comp152940_c1_seq1 1232 1156 .
Chr1	stalkie_big_nohaplotig	exon	43091339	43091483	100	-	.	Parent=comp152940_c1_seq1.mrna1;Target=comp152940_c1_seq1 1155 1011 .
Chr1	stalkie_big_nohaplotig	exon	43091547	43091682	100	-	.	Parent=comp152940_c1_seq1.mrna1;Target=comp152940_c1_seq1 1010 875 .
Chr1	stalkie_big_nohaplotig	exon	43091745	43091853	97	-	.	Parent=comp152940_c1_seq1.mrna1;Target=comp152940_c1_seq1 874 766 .
Chr1	stalkie_big_nohaplotig	exon	43091910	43092674	99	-	.	Parent=comp152940_c1_seq1.mrna1;Target=comp152940_c1_seq1 765 1 .
Chr1	stalkie_big_nohaplotig	CDS	43089950	43089961	.	-	0	Parent=comp152940_c1_seq1.mrna1;Target=comp152940_c1_seq1 1615 1604 .
Chr1	stalkie_big_nohaplotig	CDS	43090217	43090356	.	-	2	Parent=comp152940_c1_seq1.mrna1;Target=comp152940_c1_seq1 1603 1464 .
Chr1	stalkie_big_nohaplotig	CDS	43090431	43090545	.	-	0	Parent=comp152940_c1_seq1.mrna1;Target=comp152940_c1_seq1 1463 1349 .
Chr1	stalkie_big_nohaplotig	CDS	43091025	43091140	.	-	2	Parent=comp152940_c1_seq1.mrna1;Target=comp152940_c1_seq1 1348 1233 .
Chr1	stalkie_big_nohaplotig	CDS	43091200	43091276	.	-	1	Parent=comp152940_c1_seq1.mrna1;Target=comp152940_c1_seq1 1232 1156 .
Chr1	stalkie_big_nohaplotig	CDS	43091339	43091483	.	-	2	Parent=comp152940_c1_seq1.mrna1;Target=comp152940_c1_seq1 1155 1011 .
Chr1	stalkie_big_nohaplotig	CDS	43091547	43091682	.	-	0	Parent=comp152940_c1_seq1.mrna1;Target=comp152940_c1_seq1 1010 875 .
Chr1	stalkie_big_nohaplotig	CDS	43091745	43091853	.	-	1	Parent=comp152940_c1_seq1.mrna1;Target=comp152940_c1_seq1 874 766 .
Chr1	stalkie_big_nohaplotig	CDS	43091910	43092475	.	-	0	Parent=comp152940_c1_seq1.mrna1;Target=comp152940_c1_seq1 765 200 .
Chr1	stalkie_big_nohaplotig	mRNA	43090145	43092490	.	-	.	ID=FBgn0086448.1.mrna1;geneID=FBgn0086448.1.path1;Name=FBgn0086448.1;Dir=sensecoverage=100.0;identity=99.7;matches=1487;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007484
Chr1	stalkie_big_nohaplotig	exon	43090145	43090356	100	-	.	Parent=FBgn0086448.1.mrna1;Target=FBgn0086448.1 1280 1491 +
Chr1	stalkie_big_nohaplotig	exon	43090431	43090545	100	-	.	Parent=FBgn0086448.1.mrna1;Target=FBgn0086448.1 1165 1279 +
Chr1	stalkie_big_nohaplotig	exon	43091025	43091140	100	-	.	Parent=FBgn0086448.1.mrna1;Target=FBgn0086448.1 1049 1164 +
Chr1	stalkie_big_nohaplotig	exon	43091200	43091276	100	-	.	Parent=FBgn0086448.1.mrna1;Target=FBgn0086448.1 972 1048 +
Chr1	stalkie_big_nohaplotig	exon	43091339	43091483	100	-	.	Parent=FBgn0086448.1.mrna1;Target=FBgn0086448.1 827 971 +
Chr1	stalkie_big_nohaplotig	exon	43091547	43091682	100	-	.	Parent=FBgn0086448.1.mrna1;Target=FBgn0086448.1 691 826 +
Chr1	stalkie_big_nohaplotig	exon	43091745	43091853	97	-	.	Parent=FBgn0086448.1.mrna1;Target=FBgn0086448.1 582 690 +
Chr1	stalkie_big_nohaplotig	exon	43091910	43092490	99	-	.	Parent=FBgn0086448.1.mrna1;Target=FBgn0086448.1 1 581 +
Chr1	stalkie_big_nohaplotig	CDS	43090145	43090356	.	-	2	Parent=FBgn0086448.1.mrna1;Target=FBgn0086448.1 1280 1491 +
Chr1	stalkie_big_nohaplotig	CDS	43090431	43090545	.	-	0	Parent=FBgn0086448.1.mrna1;Target=FBgn0086448.1 1165 1279 +
Chr1	stalkie_big_nohaplotig	CDS	43091025	43091140	.	-	2	Parent=FBgn0086448.1.mrna1;Target=FBgn0086448.1 1049 1164 +
Chr1	stalkie_big_nohaplotig	CDS	43091200	43091276	.	-	1	Parent=FBgn0086448.1.mrna1;Target=FBgn0086448.1 972 1048 +
Chr1	stalkie_big_nohaplotig	CDS	43091339	43091483	.	-	2	Parent=FBgn0086448.1.mrna1;Target=FBgn0086448.1 827 971 +
Chr1	stalkie_big_nohaplotig	CDS	43091547	43091682	.	-	0	Parent=FBgn0086448.1.mrna1;Target=FBgn0086448.1 691 826 +
Chr1	stalkie_big_nohaplotig	CDS	43091745	43091853	.	-	1	Parent=FBgn0086448.1.mrna1;Target=FBgn0086448.1 582 690 +
Chr1	stalkie_big_nohaplotig	CDS	43091910	43092490	.	-	0	Parent=FBgn0086448.1.mrna1;Target=FBgn0086448.1 1 581 +
Chr1	gffcl	locus	43086346	43089852	.	+	.	ID=RLOC_00007485;geneIDs=FBgn0052576.1.path1;transcripts=FBgn0052576.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43086346	43089852	.	+	.	ID=FBgn0052576.1.mrna1;geneID=FBgn0052576.1.path1;Name=FBgn0052576.1;Dir=sensecoverage=100.0;identity=99.3;matches=438;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007485
Chr1	stalkie_big_nohaplotig	exon	43086346	43086391	100	+	.	Parent=FBgn0052576.1.mrna1;Target=FBgn0052576.1 1 46 +
Chr1	stalkie_big_nohaplotig	exon	43086451	43086542	100	+	.	Parent=FBgn0052576.1.mrna1;Target=FBgn0052576.1 47 138 +
Chr1	stalkie_big_nohaplotig	exon	43086604	43086782	99	+	.	Parent=FBgn0052576.1.mrna1;Target=FBgn0052576.1 139 317 +
Chr1	stalkie_big_nohaplotig	exon	43086838	43086919	97	+	.	Parent=FBgn0052576.1.mrna1;Target=FBgn0052576.1 318 399 +
Chr1	stalkie_big_nohaplotig	exon	43089811	43089852	100	+	.	Parent=FBgn0052576.1.mrna1;Target=FBgn0052576.1 400 441 +
Chr1	stalkie_big_nohaplotig	CDS	43086346	43086391	.	+	0	Parent=FBgn0052576.1.mrna1;Target=FBgn0052576.1 1 46 +
Chr1	stalkie_big_nohaplotig	CDS	43086451	43086542	.	+	2	Parent=FBgn0052576.1.mrna1;Target=FBgn0052576.1 47 138 +
Chr1	stalkie_big_nohaplotig	CDS	43086604	43086782	.	+	0	Parent=FBgn0052576.1.mrna1;Target=FBgn0052576.1 139 317 +
Chr1	stalkie_big_nohaplotig	CDS	43086838	43086919	.	+	1	Parent=FBgn0052576.1.mrna1;Target=FBgn0052576.1 318 399 +
Chr1	stalkie_big_nohaplotig	CDS	43089811	43089852	.	+	0	Parent=FBgn0052576.1.mrna1;Target=FBgn0052576.1 400 441 +
Chr1	gffcl	locus	43088962	43089498	.	-	.	ID=RLOC_00007486;geneIDs=FBgn0039576.1.path1;transcripts=FBgn0039576.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43088962	43089498	.	-	.	ID=FBgn0039576.1.mrna1;geneID=FBgn0039576.1.path1;Name=FBgn0039576.1;Dir=sensecoverage=100.0;identity=99.1;matches=339;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007486
Chr1	stalkie_big_nohaplotig	exon	43088962	43089206	98	-	.	Parent=FBgn0039576.1.mrna1;Target=FBgn0039576.1 98 342 +
Chr1	stalkie_big_nohaplotig	exon	43089260	43089307	100	-	.	Parent=FBgn0039576.1.mrna1;Target=FBgn0039576.1 50 97 +
Chr1	stalkie_big_nohaplotig	exon	43089450	43089498	100	-	.	Parent=FBgn0039576.1.mrna1;Target=FBgn0039576.1 1 49 +
Chr1	stalkie_big_nohaplotig	CDS	43088962	43089206	.	-	2	Parent=FBgn0039576.1.mrna1;Target=FBgn0039576.1 98 342 +
Chr1	stalkie_big_nohaplotig	CDS	43089260	43089307	.	-	2	Parent=FBgn0039576.1.mrna1;Target=FBgn0039576.1 50 97 +
Chr1	stalkie_big_nohaplotig	CDS	43089450	43089498	.	-	0	Parent=FBgn0039576.1.mrna1;Target=FBgn0039576.1 1 49 +
Chr1	gffcl	locus	43109609	43114304	.	-	.	ID=RLOC_00007487;geneIDs=FBgn0030693.1.path1;transcripts=FBgn0030693.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43109609	43114304	.	-	.	ID=FBgn0030693.1.mrna1;geneID=FBgn0030693.1.path1;Name=FBgn0030693.1;Dir=sensecoverage=100.0;identity=100.0;matches=822;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007487
Chr1	stalkie_big_nohaplotig	exon	43109609	43109706	100	-	.	Parent=FBgn0030693.1.mrna1;Target=FBgn0030693.1 725 822 +
Chr1	stalkie_big_nohaplotig	exon	43109779	43109945	100	-	.	Parent=FBgn0030693.1.mrna1;Target=FBgn0030693.1 558 724 +
Chr1	stalkie_big_nohaplotig	exon	43110016	43110331	100	-	.	Parent=FBgn0030693.1.mrna1;Target=FBgn0030693.1 242 557 +
Chr1	stalkie_big_nohaplotig	exon	43111110	43111295	100	-	.	Parent=FBgn0030693.1.mrna1;Target=FBgn0030693.1 56 241 +
Chr1	stalkie_big_nohaplotig	exon	43114250	43114304	100	-	.	Parent=FBgn0030693.1.mrna1;Target=FBgn0030693.1 1 55 +
Chr1	stalkie_big_nohaplotig	CDS	43109609	43109706	.	-	2	Parent=FBgn0030693.1.mrna1;Target=FBgn0030693.1 725 822 +
Chr1	stalkie_big_nohaplotig	CDS	43109779	43109945	.	-	1	Parent=FBgn0030693.1.mrna1;Target=FBgn0030693.1 558 724 +
Chr1	stalkie_big_nohaplotig	CDS	43110016	43110331	.	-	2	Parent=FBgn0030693.1.mrna1;Target=FBgn0030693.1 242 557 +
Chr1	stalkie_big_nohaplotig	CDS	43111110	43111295	.	-	2	Parent=FBgn0030693.1.mrna1;Target=FBgn0030693.1 56 241 +
Chr1	stalkie_big_nohaplotig	CDS	43114250	43114304	.	-	0	Parent=FBgn0030693.1.mrna1;Target=FBgn0030693.1 1 55 +
Chr1	gffcl	locus	43113128	43113783	.	+	.	ID=RLOC_00007488;geneIDs=comp146523_c0_seq1.path1;transcripts=comp146523_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43113128	43113783	.	+	.	ID=comp146523_c0_seq1.mrna1;geneID=comp146523_c0_seq1.path1;Name=comp146523_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=653;mismatches=3;indels=0;unknowns=0;Target=comp146523_c0_seq1 656 1 .;CDS_Target=comp146523_c0_seq1 200 3 .;locus=RLOC_00007488
Chr1	stalkie_big_nohaplotig	exon	43113128	43113783	99	+	.	Parent=comp146523_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	43113130	43113327	.	+	0	Parent=comp146523_c0_seq1.mrna1
Chr1	gffcl	locus	43116335	43117404	.	-	.	ID=RLOC_00007489;geneIDs=FBgn0003360.1.path1;transcripts=FBgn0003360.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43116335	43117404	.	-	.	ID=FBgn0003360.1.mrna1;geneID=FBgn0003360.1.path1;Name=FBgn0003360.1;Dir=sensecoverage=100.0;identity=99.9;matches=959;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007489
Chr1	stalkie_big_nohaplotig	exon	43116335	43116800	100	-	.	Parent=FBgn0003360.1.mrna1;Target=FBgn0003360.1 495 960 +
Chr1	stalkie_big_nohaplotig	exon	43116856	43116983	99	-	.	Parent=FBgn0003360.1.mrna1;Target=FBgn0003360.1 367 494 +
Chr1	stalkie_big_nohaplotig	exon	43117039	43117404	100	-	.	Parent=FBgn0003360.1.mrna1;Target=FBgn0003360.1 1 366 +
Chr1	stalkie_big_nohaplotig	CDS	43116335	43116800	.	-	1	Parent=FBgn0003360.1.mrna1;Target=FBgn0003360.1 495 960 +
Chr1	stalkie_big_nohaplotig	CDS	43116856	43116983	.	-	0	Parent=FBgn0003360.1.mrna1;Target=FBgn0003360.1 367 494 +
Chr1	stalkie_big_nohaplotig	CDS	43117039	43117404	.	-	0	Parent=FBgn0003360.1.mrna1;Target=FBgn0003360.1 1 366 +
Chr1	gffcl	locus	43123423	43123680	.	-	.	ID=RLOC_00007490;geneIDs=comp371111_c0_seq1.path2;transcripts=comp371111_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	43123423	43123680	.	-	.	ID=comp371111_c0_seq1.mrna2;geneID=comp371111_c0_seq1.path2;Name=comp371111_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.8;matches=255;mismatches=3;indels=0;unknowns=0;Target=comp371111_c0_seq1 258 1 .;CDS_Target=comp371111_c0_seq1 154 83 .;locus=RLOC_00007490
Chr1	stalkie_big_nohaplotig	exon	43123423	43123680	98	-	.	Parent=comp371111_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	43123527	43123598	.	-	0	Parent=comp371111_c0_seq1.mrna2
Chr1	gffcl	locus	43130221	43134859	.	-	.	ID=RLOC_00007491;geneIDs=FBgn0036761.1.path1;transcripts=FBgn0036761.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43130221	43134859	.	-	.	ID=FBgn0036761.1.mrna1;geneID=FBgn0036761.1.path1;Name=FBgn0036761.1;Dir=sensecoverage=100.0;identity=99.7;matches=969;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007491
Chr1	stalkie_big_nohaplotig	exon	43130221	43130585	99	-	.	Parent=FBgn0036761.1.mrna1;Target=FBgn0036761.1 608 972 +
Chr1	stalkie_big_nohaplotig	exon	43130660	43130771	100	-	.	Parent=FBgn0036761.1.mrna1;Target=FBgn0036761.1 496 607 +
Chr1	stalkie_big_nohaplotig	exon	43132339	43132446	98	-	.	Parent=FBgn0036761.1.mrna1;Target=FBgn0036761.1 388 495 +
Chr1	stalkie_big_nohaplotig	exon	43132527	43132675	100	-	.	Parent=FBgn0036761.1.mrna1;Target=FBgn0036761.1 239 387 +
Chr1	stalkie_big_nohaplotig	exon	43134622	43134859	100	-	.	Parent=FBgn0036761.1.mrna1;Target=FBgn0036761.1 1 238 +
Chr1	stalkie_big_nohaplotig	CDS	43130221	43130585	.	-	2	Parent=FBgn0036761.1.mrna1;Target=FBgn0036761.1 608 972 +
Chr1	stalkie_big_nohaplotig	CDS	43130660	43130771	.	-	0	Parent=FBgn0036761.1.mrna1;Target=FBgn0036761.1 496 607 +
Chr1	stalkie_big_nohaplotig	CDS	43132339	43132446	.	-	0	Parent=FBgn0036761.1.mrna1;Target=FBgn0036761.1 388 495 +
Chr1	stalkie_big_nohaplotig	CDS	43132527	43132675	.	-	2	Parent=FBgn0036761.1.mrna1;Target=FBgn0036761.1 239 387 +
Chr1	stalkie_big_nohaplotig	CDS	43134622	43134859	.	-	0	Parent=FBgn0036761.1.mrna1;Target=FBgn0036761.1 1 238 +
Chr1	gffcl	locus	43136247	43138585	.	+	.	ID=RLOC_00007492;geneIDs=FBgn0036762.1.path1;transcripts=FBgn0036762.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43136247	43138585	.	+	.	ID=FBgn0036762.1.mrna1;geneID=FBgn0036762.1.path1;Name=FBgn0036762.1;Dir=sensecoverage=100.0;identity=99.9;matches=1525;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007492
Chr1	stalkie_big_nohaplotig	exon	43136247	43136303	100	+	.	Parent=FBgn0036762.1.mrna1;Target=FBgn0036762.1 1 57 +
Chr1	stalkie_big_nohaplotig	exon	43136855	43136998	100	+	.	Parent=FBgn0036762.1.mrna1;Target=FBgn0036762.1 58 201 +
Chr1	stalkie_big_nohaplotig	exon	43137061	43137444	100	+	.	Parent=FBgn0036762.1.mrna1;Target=FBgn0036762.1 202 585 +
Chr1	stalkie_big_nohaplotig	exon	43137504	43138292	99	+	.	Parent=FBgn0036762.1.mrna1;Target=FBgn0036762.1 586 1374 +
Chr1	stalkie_big_nohaplotig	exon	43138360	43138449	100	+	.	Parent=FBgn0036762.1.mrna1;Target=FBgn0036762.1 1375 1464 +
Chr1	stalkie_big_nohaplotig	exon	43138523	43138585	100	+	.	Parent=FBgn0036762.1.mrna1;Target=FBgn0036762.1 1465 1527 +
Chr1	stalkie_big_nohaplotig	CDS	43136247	43136303	.	+	0	Parent=FBgn0036762.1.mrna1;Target=FBgn0036762.1 1 57 +
Chr1	stalkie_big_nohaplotig	CDS	43136855	43136998	.	+	0	Parent=FBgn0036762.1.mrna1;Target=FBgn0036762.1 58 201 +
Chr1	stalkie_big_nohaplotig	CDS	43137061	43137444	.	+	0	Parent=FBgn0036762.1.mrna1;Target=FBgn0036762.1 202 585 +
Chr1	stalkie_big_nohaplotig	CDS	43137504	43138292	.	+	0	Parent=FBgn0036762.1.mrna1;Target=FBgn0036762.1 586 1374 +
Chr1	stalkie_big_nohaplotig	CDS	43138360	43138449	.	+	0	Parent=FBgn0036762.1.mrna1;Target=FBgn0036762.1 1375 1464 +
Chr1	stalkie_big_nohaplotig	CDS	43138523	43138585	.	+	0	Parent=FBgn0036762.1.mrna1;Target=FBgn0036762.1 1465 1527 +
Chr1	gffcl	locus	43142298	43143959	.	+	.	ID=RLOC_00007493;geneIDs=FBgn0036763.1.path1;transcripts=FBgn0036763.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43142298	43143959	.	+	.	ID=FBgn0036763.1.mrna1;geneID=FBgn0036763.1.path1;Name=FBgn0036763.1;Dir=sensecoverage=100.0;identity=99.0;matches=1464;mismatches=15;indels=0;unknowns=0;locus=RLOC_00007493
Chr1	stalkie_big_nohaplotig	exon	43142298	43142453	99	+	.	Parent=FBgn0036763.1.mrna1;Target=FBgn0036763.1 1 156 +
Chr1	stalkie_big_nohaplotig	exon	43142524	43142685	99	+	.	Parent=FBgn0036763.1.mrna1;Target=FBgn0036763.1 157 318 +
Chr1	stalkie_big_nohaplotig	exon	43142744	43143006	99	+	.	Parent=FBgn0036763.1.mrna1;Target=FBgn0036763.1 319 581 +
Chr1	stalkie_big_nohaplotig	exon	43143062	43143959	98	+	.	Parent=FBgn0036763.1.mrna1;Target=FBgn0036763.1 582 1479 +
Chr1	stalkie_big_nohaplotig	CDS	43142298	43142453	.	+	0	Parent=FBgn0036763.1.mrna1;Target=FBgn0036763.1 1 156 +
Chr1	stalkie_big_nohaplotig	CDS	43142524	43142685	.	+	0	Parent=FBgn0036763.1.mrna1;Target=FBgn0036763.1 157 318 +
Chr1	stalkie_big_nohaplotig	CDS	43142744	43143006	.	+	0	Parent=FBgn0036763.1.mrna1;Target=FBgn0036763.1 319 581 +
Chr1	stalkie_big_nohaplotig	CDS	43143062	43143959	.	+	1	Parent=FBgn0036763.1.mrna1;Target=FBgn0036763.1 582 1479 +
Chr1	gffcl	locus	43166061	43167715	.	+	.	ID=RLOC_00007494;geneIDs=FBgn0034479.2.path1;transcripts=FBgn0034479.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43166061	43167715	.	+	.	ID=FBgn0034479.2.mrna1;geneID=FBgn0034479.2.path1;Name=FBgn0034479.2;Dir=sensecoverage=100.0;identity=99.7;matches=1462;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007494
Chr1	stalkie_big_nohaplotig	exon	43166061	43166079	100	+	.	Parent=FBgn0034479.2.mrna1;Target=FBgn0034479.2 1 19 +
Chr1	stalkie_big_nohaplotig	exon	43166135	43166474	99	+	.	Parent=FBgn0034479.2.mrna1;Target=FBgn0034479.2 20 359 +
Chr1	stalkie_big_nohaplotig	exon	43166533	43166676	100	+	.	Parent=FBgn0034479.2.mrna1;Target=FBgn0034479.2 360 503 +
Chr1	stalkie_big_nohaplotig	exon	43166752	43167715	99	+	.	Parent=FBgn0034479.2.mrna1;Target=FBgn0034479.2 504 1467 +
Chr1	stalkie_big_nohaplotig	CDS	43166061	43166079	.	+	0	Parent=FBgn0034479.2.mrna1;Target=FBgn0034479.2 1 19 +
Chr1	stalkie_big_nohaplotig	CDS	43166135	43166474	.	+	2	Parent=FBgn0034479.2.mrna1;Target=FBgn0034479.2 20 359 +
Chr1	stalkie_big_nohaplotig	CDS	43166533	43166676	.	+	1	Parent=FBgn0034479.2.mrna1;Target=FBgn0034479.2 360 503 +
Chr1	stalkie_big_nohaplotig	CDS	43166752	43167715	.	+	1	Parent=FBgn0034479.2.mrna1;Target=FBgn0034479.2 504 1467 +
Chr1	gffcl	locus	43181226	43181711	.	+	.	ID=RLOC_00007495;geneIDs=comp72295_c0_seq1.path1;transcripts=comp72295_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43181226	43181711	.	+	.	ID=comp72295_c0_seq1.mrna1;geneID=comp72295_c0_seq1.path1;Name=comp72295_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.0;matches=481;mismatches=5;indels=0;unknowns=0;Target=comp72295_c0_seq1 491 6 .;CDS_Target=comp72295_c0_seq1 377 291 .;locus=RLOC_00007495
Chr1	stalkie_big_nohaplotig	exon	43181226	43181711	98	+	.	Parent=comp72295_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	43181511	43181597	.	+	0	Parent=comp72295_c0_seq1.mrna1
Chr1	gffcl	locus	43245173	43278120	.	+	.	ID=RLOC_00007496;geneIDs=FBgn0261529.1.path1;transcripts=FBgn0261529.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43245173	43278120	.	+	.	ID=FBgn0261529.1.mrna1;geneID=FBgn0261529.1.path1;Name=FBgn0261529.1;Dir=sensecoverage=100.0;identity=99.9;matches=3153;mismatches=2;indels=1;unknowns=0;Target=FBgn0261529.1 3 152 +;locus=RLOC_00007496
Chr1	stalkie_big_nohaplotig	exon	43245173	43246680	99	+	.	Parent=FBgn0261529.1.mrna1;Target=FBgn0261529.1 1 1509 +
Chr1	stalkie_big_nohaplotig	exon	43246749	43246941	100	+	.	Parent=FBgn0261529.1.mrna1;Target=FBgn0261529.1 1510 1702 +
Chr1	stalkie_big_nohaplotig	exon	43246997	43247085	100	+	.	Parent=FBgn0261529.1.mrna1;Target=FBgn0261529.1 1703 1791 +
Chr1	stalkie_big_nohaplotig	exon	43247140	43247645	100	+	.	Parent=FBgn0261529.1.mrna1;Target=FBgn0261529.1 1792 2297 +
Chr1	stalkie_big_nohaplotig	exon	43248344	43248510	100	+	.	Parent=FBgn0261529.1.mrna1;Target=FBgn0261529.1 2298 2464 +
Chr1	stalkie_big_nohaplotig	exon	43249462	43249672	100	+	.	Parent=FBgn0261529.1.mrna1;Target=FBgn0261529.1 2465 2675 +
Chr1	stalkie_big_nohaplotig	exon	43277574	43277681	99	+	.	Parent=FBgn0261529.1.mrna1;Target=FBgn0261529.1 2676 2783 +
Chr1	stalkie_big_nohaplotig	exon	43277748	43278120	99	+	.	Parent=FBgn0261529.1.mrna1;Target=FBgn0261529.1 2784 3156 +
Chr1	stalkie_big_nohaplotig	CDS	43245175	43245323	.	+	0	Parent=FBgn0261529.1.mrna1
Chr1	gffcl	locus	43249822	43252742	.	-	.	ID=RLOC_00007497;geneIDs=FBgn0052195.4.path1;transcripts=FBgn0052195.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43249822	43252742	.	-	.	ID=FBgn0052195.4.mrna1;geneID=FBgn0052195.4.path1;Name=FBgn0052195.4;Dir=sensecoverage=100.0;identity=99.0;matches=1245;mismatches=12;indels=0;unknowns=0;locus=RLOC_00007497
Chr1	stalkie_big_nohaplotig	exon	43249822	43250226	99	-	.	Parent=FBgn0052195.4.mrna1;Target=FBgn0052195.4 853 1257 +
Chr1	stalkie_big_nohaplotig	exon	43250412	43250711	100	-	.	Parent=FBgn0052195.4.mrna1;Target=FBgn0052195.4 553 852 +
Chr1	stalkie_big_nohaplotig	exon	43251937	43252105	96	-	.	Parent=FBgn0052195.4.mrna1;Target=FBgn0052195.4 384 552 +
Chr1	stalkie_big_nohaplotig	exon	43252360	43252742	98	-	.	Parent=FBgn0052195.4.mrna1;Target=FBgn0052195.4 1 383 +
Chr1	stalkie_big_nohaplotig	CDS	43249822	43250226	.	-	0	Parent=FBgn0052195.4.mrna1;Target=FBgn0052195.4 853 1257 +
Chr1	stalkie_big_nohaplotig	CDS	43250412	43250711	.	-	0	Parent=FBgn0052195.4.mrna1;Target=FBgn0052195.4 553 852 +
Chr1	stalkie_big_nohaplotig	CDS	43251937	43252105	.	-	1	Parent=FBgn0052195.4.mrna1;Target=FBgn0052195.4 384 552 +
Chr1	stalkie_big_nohaplotig	CDS	43252360	43252742	.	-	0	Parent=FBgn0052195.4.mrna1;Target=FBgn0052195.4 1 383 +
Chr1	gffcl	locus	43258630	43261731	.	-	.	ID=RLOC_00007499;geneIDs=FBgn0025620.2.path1;transcripts=FBgn0025620.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43258630	43261731	.	-	.	ID=FBgn0025620.2.mrna1;geneID=FBgn0025620.2.path1;Name=FBgn0025620.2;Dir=sensecoverage=100.0;identity=99.6;matches=1243;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007499
Chr1	stalkie_big_nohaplotig	exon	43258630	43259040	99	-	.	Parent=FBgn0025620.2.mrna1;Target=FBgn0025620.2 838 1248 +
Chr1	stalkie_big_nohaplotig	exon	43259510	43259812	99	-	.	Parent=FBgn0025620.2.mrna1;Target=FBgn0025620.2 535 837 +
Chr1	stalkie_big_nohaplotig	exon	43261128	43261296	99	-	.	Parent=FBgn0025620.2.mrna1;Target=FBgn0025620.2 366 534 +
Chr1	stalkie_big_nohaplotig	exon	43261367	43261731	100	-	.	Parent=FBgn0025620.2.mrna1;Target=FBgn0025620.2 1 365 +
Chr1	stalkie_big_nohaplotig	CDS	43258630	43259040	.	-	0	Parent=FBgn0025620.2.mrna1;Target=FBgn0025620.2 838 1248 +
Chr1	stalkie_big_nohaplotig	CDS	43259510	43259812	.	-	0	Parent=FBgn0025620.2.mrna1;Target=FBgn0025620.2 535 837 +
Chr1	stalkie_big_nohaplotig	CDS	43261128	43261296	.	-	1	Parent=FBgn0025620.2.mrna1;Target=FBgn0025620.2 366 534 +
Chr1	stalkie_big_nohaplotig	CDS	43261367	43261731	.	-	0	Parent=FBgn0025620.2.mrna1;Target=FBgn0025620.2 1 365 +
Chr1	gffcl	locus	43266497	43268052	.	-	.	ID=RLOC_00007501;geneIDs=FBgn0052195.1.path1;transcripts=FBgn0052195.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43266497	43268052	.	-	.	ID=FBgn0052195.1.mrna1;geneID=FBgn0052195.1.path1;Name=FBgn0052195.1;Dir=sensecoverage=100.0;identity=99.4;matches=1238;mismatches=7;indels=0;unknowns=0;locus=RLOC_00007501
Chr1	stalkie_big_nohaplotig	exon	43266497	43266907	99	-	.	Parent=FBgn0052195.1.mrna1;Target=FBgn0052195.1 835 1245 +
Chr1	stalkie_big_nohaplotig	exon	43266969	43267259	100	-	.	Parent=FBgn0052195.1.mrna1;Target=FBgn0052195.1 544 834 +
Chr1	stalkie_big_nohaplotig	exon	43267419	43267587	100	-	.	Parent=FBgn0052195.1.mrna1;Target=FBgn0052195.1 375 543 +
Chr1	stalkie_big_nohaplotig	exon	43267679	43268052	98	-	.	Parent=FBgn0052195.1.mrna1;Target=FBgn0052195.1 1 374 +
Chr1	stalkie_big_nohaplotig	CDS	43266497	43266907	.	-	0	Parent=FBgn0052195.1.mrna1;Target=FBgn0052195.1 835 1245 +
Chr1	stalkie_big_nohaplotig	CDS	43266969	43267259	.	-	0	Parent=FBgn0052195.1.mrna1;Target=FBgn0052195.1 544 834 +
Chr1	stalkie_big_nohaplotig	CDS	43267419	43267587	.	-	1	Parent=FBgn0052195.1.mrna1;Target=FBgn0052195.1 375 543 +
Chr1	stalkie_big_nohaplotig	CDS	43267679	43268052	.	-	0	Parent=FBgn0052195.1.mrna1;Target=FBgn0052195.1 1 374 +
Chr1	gffcl	locus	43270383	43274201	.	-	.	ID=RLOC_00007502;geneIDs=FBgn0052195.3.path1;transcripts=FBgn0052195.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43270383	43274201	.	-	.	ID=FBgn0052195.3.mrna1;geneID=FBgn0052195.3.path1;Name=FBgn0052195.3;Dir=sensecoverage=100.0;identity=98.9;matches=1293;mismatches=15;indels=0;unknowns=0;locus=RLOC_00007502
Chr1	stalkie_big_nohaplotig	exon	43270383	43270787	98	-	.	Parent=FBgn0052195.3.mrna1;Target=FBgn0052195.3 904 1308 +
Chr1	stalkie_big_nohaplotig	exon	43270845	43271126	99	-	.	Parent=FBgn0052195.3.mrna1;Target=FBgn0052195.3 622 903 +
Chr1	stalkie_big_nohaplotig	exon	43273441	43273609	98	-	.	Parent=FBgn0052195.3.mrna1;Target=FBgn0052195.3 453 621 +
Chr1	stalkie_big_nohaplotig	exon	43273750	43274201	98	-	.	Parent=FBgn0052195.3.mrna1;Target=FBgn0052195.3 1 452 +
Chr1	stalkie_big_nohaplotig	CDS	43270383	43270787	.	-	0	Parent=FBgn0052195.3.mrna1;Target=FBgn0052195.3 904 1308 +
Chr1	stalkie_big_nohaplotig	CDS	43270845	43271126	.	-	0	Parent=FBgn0052195.3.mrna1;Target=FBgn0052195.3 622 903 +
Chr1	stalkie_big_nohaplotig	CDS	43273441	43273609	.	-	1	Parent=FBgn0052195.3.mrna1;Target=FBgn0052195.3 453 621 +
Chr1	stalkie_big_nohaplotig	CDS	43273750	43274201	.	-	0	Parent=FBgn0052195.3.mrna1;Target=FBgn0052195.3 1 452 +
Chr1	gffcl	locus	43282725	43284607	.	-	.	ID=RLOC_00007503;geneIDs=FBgn0034479.3.path1;transcripts=FBgn0034479.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43282725	43284607	.	-	.	ID=FBgn0034479.3.mrna1;geneID=FBgn0034479.3.path1;Name=FBgn0034479.3;Dir=sensecoverage=100.0;identity=99.5;matches=1681;mismatches=8;indels=0;unknowns=0;locus=RLOC_00007503
Chr1	stalkie_big_nohaplotig	exon	43282725	43283802	99	-	.	Parent=FBgn0034479.3.mrna1;Target=FBgn0034479.3 612 1689 +
Chr1	stalkie_big_nohaplotig	exon	43283857	43284000	100	-	.	Parent=FBgn0034479.3.mrna1;Target=FBgn0034479.3 468 611 +
Chr1	stalkie_big_nohaplotig	exon	43284065	43284398	99	-	.	Parent=FBgn0034479.3.mrna1;Target=FBgn0034479.3 134 467 +
Chr1	stalkie_big_nohaplotig	exon	43284475	43284607	98	-	.	Parent=FBgn0034479.3.mrna1;Target=FBgn0034479.3 1 133 +
Chr1	stalkie_big_nohaplotig	CDS	43282725	43283802	.	-	1	Parent=FBgn0034479.3.mrna1;Target=FBgn0034479.3 612 1689 +
Chr1	stalkie_big_nohaplotig	CDS	43283857	43284000	.	-	1	Parent=FBgn0034479.3.mrna1;Target=FBgn0034479.3 468 611 +
Chr1	stalkie_big_nohaplotig	CDS	43284065	43284398	.	-	2	Parent=FBgn0034479.3.mrna1;Target=FBgn0034479.3 134 467 +
Chr1	stalkie_big_nohaplotig	CDS	43284475	43284607	.	-	0	Parent=FBgn0034479.3.mrna1;Target=FBgn0034479.3 1 133 +
Chr1	gffcl	locus	43310218	43310652	.	-	.	ID=RLOC_00007504;geneIDs=comp908764_c0_seq1.path1;transcripts=comp908764_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43310218	43310652	.	-	.	ID=comp908764_c0_seq1.mrna1;geneID=comp908764_c0_seq1.path1;Name=comp908764_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=433;mismatches=2;indels=1;unknowns=0;Target=comp908764_c0_seq1 436 1 .;CDS_Target=comp908764_c0_seq1 32 3 .;locus=RLOC_00007504
Chr1	stalkie_big_nohaplotig	exon	43310218	43310652	99	-	.	Parent=comp908764_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	43310622	43310650	.	-	0	Parent=comp908764_c0_seq1.mrna1
Chr1	gffcl	locus	43311735	43313356	.	-	.	ID=RLOC_00007505;geneIDs=FBgn0038412.1.path1;transcripts=FBgn0038412.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43311735	43313356	.	-	.	ID=FBgn0038412.1.mrna1;geneID=FBgn0038412.1.path1;Name=FBgn0038412.1;Dir=sensecoverage=99.9;identity=99.6;matches=1344;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007505
Chr1	stalkie_big_nohaplotig	exon	43311735	43311826	100	-	.	Parent=FBgn0038412.1.mrna1;Target=FBgn0038412.1 1259 1350 +
Chr1	stalkie_big_nohaplotig	exon	43312100	43313356	99	-	.	Parent=FBgn0038412.1.mrna1;Target=FBgn0038412.1 2 1258 +
Chr1	stalkie_big_nohaplotig	CDS	43311735	43311826	.	-	2	Parent=FBgn0038412.1.mrna1;Target=FBgn0038412.1 1259 1350 +
Chr1	stalkie_big_nohaplotig	CDS	43312100	43313354	.	-	0	Parent=FBgn0038412.1.mrna1;Target=FBgn0038412.1 4 1258 +
Chr1	gffcl	locus	43321452	43322414	.	+	.	ID=RLOC_00007506;geneIDs=comp153960_c0_seq1.path1;transcripts=comp153960_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43321452	43322414	.	+	.	ID=comp153960_c0_seq1.mrna1;geneID=comp153960_c0_seq1.path1;Name=comp153960_c0_seq1;Dir=indeterminatecoverage=99.6;identity=93.4;matches=901;mismatches=59;indels=5;unknowns=0;Target=comp153960_c0_seq1 962 1 .;CDS_Target=comp153960_c0_seq1 451 404 .;locus=RLOC_00007506
Chr1	stalkie_big_nohaplotig	exon	43321452	43322414	93	+	.	Parent=comp153960_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	43321853	43321900	.	+	0	Parent=comp153960_c0_seq1.mrna1
Chr1	gffcl	locus	43332106	43336038	.	+	.	ID=RLOC_00007507;geneIDs=FBgn0036775.1.path1;transcripts=FBgn0036775.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43332106	43336038	.	+	.	ID=FBgn0036775.1.mrna1;geneID=FBgn0036775.1.path1;Name=FBgn0036775.1;Dir=sensecoverage=100.0;identity=99.6;matches=1189;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007507
Chr1	stalkie_big_nohaplotig	exon	43332106	43332332	100	+	.	Parent=FBgn0036775.1.mrna1;Target=FBgn0036775.1 1 227 +
Chr1	stalkie_big_nohaplotig	exon	43332394	43332752	99	+	.	Parent=FBgn0036775.1.mrna1;Target=FBgn0036775.1 228 586 +
Chr1	stalkie_big_nohaplotig	exon	43333066	43333140	100	+	.	Parent=FBgn0036775.1.mrna1;Target=FBgn0036775.1 587 661 +
Chr1	stalkie_big_nohaplotig	exon	43333423	43333556	100	+	.	Parent=FBgn0036775.1.mrna1;Target=FBgn0036775.1 662 795 +
Chr1	stalkie_big_nohaplotig	exon	43333649	43333708	100	+	.	Parent=FBgn0036775.1.mrna1;Target=FBgn0036775.1 796 855 +
Chr1	stalkie_big_nohaplotig	exon	43335478	43335666	99	+	.	Parent=FBgn0036775.1.mrna1;Target=FBgn0036775.1 856 1044 +
Chr1	stalkie_big_nohaplotig	exon	43335889	43336038	99	+	.	Parent=FBgn0036775.1.mrna1;Target=FBgn0036775.1 1045 1194 +
Chr1	stalkie_big_nohaplotig	CDS	43332106	43332332	.	+	0	Parent=FBgn0036775.1.mrna1;Target=FBgn0036775.1 1 227 +
Chr1	stalkie_big_nohaplotig	CDS	43332394	43332752	.	+	1	Parent=FBgn0036775.1.mrna1;Target=FBgn0036775.1 228 586 +
Chr1	stalkie_big_nohaplotig	CDS	43333066	43333140	.	+	2	Parent=FBgn0036775.1.mrna1;Target=FBgn0036775.1 587 661 +
Chr1	stalkie_big_nohaplotig	CDS	43333423	43333556	.	+	2	Parent=FBgn0036775.1.mrna1;Target=FBgn0036775.1 662 795 +
Chr1	stalkie_big_nohaplotig	CDS	43333649	43333708	.	+	0	Parent=FBgn0036775.1.mrna1;Target=FBgn0036775.1 796 855 +
Chr1	stalkie_big_nohaplotig	CDS	43335478	43335666	.	+	0	Parent=FBgn0036775.1.mrna1;Target=FBgn0036775.1 856 1044 +
Chr1	stalkie_big_nohaplotig	CDS	43335889	43336038	.	+	0	Parent=FBgn0036775.1.mrna1;Target=FBgn0036775.1 1045 1194 +
Chr1	gffcl	locus	43337134	43337703	.	-	.	ID=RLOC_00007508;geneIDs=comp153061_c0_seq1.path1;transcripts=comp153061_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43337134	43337703	.	-	.	ID=comp153061_c0_seq1.mrna1;geneID=comp153061_c0_seq1.path1;Name=comp153061_c0_seq1;Dir=indeterminatecoverage=100.0;identity=85.3;matches=529;mismatches=35;indels=56;unknowns=0;Target=comp153061_c0_seq1 614 1 .;CDS_Target=comp153061_c0_seq1 333 283 .;locus=RLOC_00007508
Chr1	stalkie_big_nohaplotig	exon	43337134	43337703	85	-	.	Parent=comp153061_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	43337370	43337419	.	-	0	Parent=comp153061_c0_seq1.mrna1
Chr1	gffcl	locus	43337796	43338461	.	-	.	ID=RLOC_00007509;geneIDs=comp153452_c0_seq1.path1;transcripts=comp153452_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43337796	43338461	.	-	.	ID=comp153452_c0_seq1.mrna1;geneID=comp153452_c0_seq1.path1;Name=comp153452_c0_seq1;Dir=indeterminatecoverage=99.9;identity=90.1;matches=629;mismatches=24;indels=45;unknowns=0;Target=comp153452_c0_seq1 686 2 .;CDS_Target=comp153452_c0_seq1 67 2 .;locus=RLOC_00007509
Chr1	stalkie_big_nohaplotig	exon	43337796	43338461	90	-	.	Parent=comp153452_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	43338396	43338461	.	-	0	Parent=comp153452_c0_seq1.mrna1
Chr1	gffcl	locus	43338800	43341535	.	-	.	ID=RLOC_00007510;geneIDs=FBgn0036774.1.path1;transcripts=FBgn0036774.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43338800	43341535	.	-	.	ID=FBgn0036774.1.mrna1;geneID=FBgn0036774.1.path1;Name=FBgn0036774.1;Dir=sensecoverage=100.0;identity=98.5;matches=703;mismatches=11;indels=0;unknowns=0;locus=RLOC_00007510
Chr1	stalkie_big_nohaplotig	exon	43338800	43338988	98	-	.	Parent=FBgn0036774.1.mrna1;Target=FBgn0036774.1 526 714 +
Chr1	stalkie_big_nohaplotig	exon	43340955	43341243	98	-	.	Parent=FBgn0036774.1.mrna1;Target=FBgn0036774.1 237 525 +
Chr1	stalkie_big_nohaplotig	exon	43341300	43341535	98	-	.	Parent=FBgn0036774.1.mrna1;Target=FBgn0036774.1 1 236 +
Chr1	stalkie_big_nohaplotig	CDS	43338800	43338988	.	-	0	Parent=FBgn0036774.1.mrna1;Target=FBgn0036774.1 526 714 +
Chr1	stalkie_big_nohaplotig	CDS	43340955	43341243	.	-	1	Parent=FBgn0036774.1.mrna1;Target=FBgn0036774.1 237 525 +
Chr1	stalkie_big_nohaplotig	CDS	43341300	43341535	.	-	0	Parent=FBgn0036774.1.mrna1;Target=FBgn0036774.1 1 236 +
Chr1	gffcl	locus	43360629	43361125	.	-	.	ID=RLOC_00007511;geneIDs=comp153683_c0_seq1.path1;transcripts=comp153683_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43360629	43361125	.	-	.	ID=comp153683_c0_seq1.mrna1;geneID=comp153683_c0_seq1.path1;Name=comp153683_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.0;matches=492;mismatches=5;indels=0;unknowns=0;Target=comp153683_c0_seq1 500 4 .;CDS_Target=comp153683_c0_seq1 17 6 .;locus=RLOC_00007511
Chr1	stalkie_big_nohaplotig	exon	43360629	43361125	98	-	.	Parent=comp153683_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	43361112	43361123	.	-	0	Parent=comp153683_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43996360	43997593	.	-	.	ID=comp161320_c0_seq1.mrna1;geneID=comp161320_c0_seq1.path1;Name=comp161320_c0_seq1;Dir=indeterminatecoverage=98.8;identity=95.4;matches=1221;mismatches=13;indels=46;unknowns=0;Target=comp161320_c0_seq1 1280 1 .;CDS_Target=comp161320_c0_seq1 1083 982 .;locus=RLOC_00007512
Chr1	stalkie_big_nohaplotig	exon	43996360	43997593	95	-	.	Parent=comp161320_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	43996557	43996656	.	-	0	Parent=comp161320_c0_seq1.mrna1
Chr1	gffcl	locus	43438863	43439230	.	+	.	ID=RLOC_00007513;geneIDs=comp146318_c0_seq1.path1;transcripts=comp146318_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43438863	43439230	.	+	.	ID=comp146318_c0_seq1.mrna1;geneID=comp146318_c0_seq1.path1;Name=comp146318_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=361;mismatches=6;indels=1;unknowns=0;Target=comp146318_c0_seq1 367 1 .;CDS_Target=comp146318_c0_seq1 14 3 .;locus=RLOC_00007513
Chr1	stalkie_big_nohaplotig	exon	43438863	43439230	98	+	.	Parent=comp146318_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	43438865	43438876	.	+	0	Parent=comp146318_c0_seq1.mrna1
Chr1	gffcl	locus	43515222	43515779	.	+	.	ID=RLOC_00007514;geneIDs=comp150173_c0_seq1.path1;transcripts=comp150173_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43515222	43515779	.	+	.	ID=comp150173_c0_seq1.mrna1;geneID=comp150173_c0_seq1.path1;Name=comp150173_c0_seq1;Dir=indeterminatecoverage=96.6;identity=97.3;matches=546;mismatches=11;indels=4;unknowns=0;Target=comp150173_c0_seq1 580 21 .;CDS_Target=comp150173_c0_seq1 531 424 .;locus=RLOC_00007514
Chr1	stalkie_big_nohaplotig	exon	43515222	43515779	97	+	.	Parent=comp150173_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	43515622	43515729	.	+	0	Parent=comp150173_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43726345	43727892	.	+	.	ID=comp146160_c1_seq1.mrna1;geneID=comp146160_c1_seq1.path1;Name=comp146160_c1_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=532;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007515
Chr1	stalkie_big_nohaplotig	exon	43726345	43726828	100	+	.	Parent=comp146160_c1_seq1.mrna1;Target=comp146160_c1_seq1 1 484 +
Chr1	stalkie_big_nohaplotig	exon	43727844	43727892	97	+	.	Parent=comp146160_c1_seq1.mrna1;Target=comp146160_c1_seq1 485 533 +
Chr1	stalkie_big_nohaplotig	CDS	43726346	43726828	.	+	0	Parent=comp146160_c1_seq1.mrna1;Target=comp146160_c1_seq1 2 484 +
Chr1	stalkie_big_nohaplotig	CDS	43727844	43727870	.	+	0	Parent=comp146160_c1_seq1.mrna1;Target=comp146160_c1_seq1 485 511 +
Chr1	stalkie_big_nohaplotig	mRNA	43998062	43998563	.	-	.	ID=comp145755_c0_seq1.mrna1;geneID=comp145755_c0_seq1.path1;Name=comp145755_c0_seq1;Dir=indeterminatecoverage=97.1;identity=99.8;matches=501;mismatches=1;indels=0;unknowns=0;Target=comp145755_c0_seq1 502 1 .;CDS_Target=comp145755_c0_seq1 360 286 .;locus=RLOC_00007515
Chr1	stalkie_big_nohaplotig	exon	43998062	43998563	99	-	.	Parent=comp145755_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	43998204	43998278	.	-	0	Parent=comp145755_c0_seq1.mrna1
Chr1	gffcl	locus	43659006	43659753	.	-	.	ID=RLOC_00007516;geneIDs=comp115539_c0_seq1.path1;transcripts=comp115539_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43659006	43659753	.	-	.	ID=comp115539_c0_seq1.mrna1;geneID=comp115539_c0_seq1.path1;Name=comp115539_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=740;mismatches=0;indels=8;unknowns=0;Target=comp115539_c0_seq1 740 1 .;CDS_Target=comp115539_c0_seq1 444 295 .;locus=RLOC_00007516
Chr1	stalkie_big_nohaplotig	exon	43659006	43659753	98	-	.	Parent=comp115539_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	43659302	43659459	.	-	0	Parent=comp115539_c0_seq1.mrna1
Chr1	gffcl	locus	43660050	43660479	.	-	.	ID=RLOC_00007517;geneIDs=comp116523_c0_seq1.path2;transcripts=comp116523_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	43660050	43660479	.	-	.	ID=comp116523_c0_seq1.mrna2;geneID=comp116523_c0_seq1.path2;Name=comp116523_c0_seq1;Dir=indeterminatecoverage=89.6;identity=99.8;matches=429;mismatches=1;indels=0;unknowns=0;Target=comp116523_c0_seq1 480 51 .;CDS_Target=comp116523_c0_seq1 321 91 .;locus=RLOC_00007517
Chr1	stalkie_big_nohaplotig	exon	43660050	43660479	99	-	.	Parent=comp116523_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	43660209	43660439	.	-	0	Parent=comp116523_c0_seq1.mrna2
Chr1	gffcl	locus	43661171	43661712	.	-	.	ID=RLOC_00007518;geneIDs=comp154729_c0_seq1.path1;transcripts=comp154729_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43661171	43661712	.	-	.	ID=comp154729_c0_seq1.mrna1;geneID=comp154729_c0_seq1.path1;Name=comp154729_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=536;mismatches=6;indels=0;unknowns=0;Target=comp154729_c0_seq1 542 1 .;CDS_Target=comp154729_c0_seq1 214 167 .;locus=RLOC_00007518
Chr1	stalkie_big_nohaplotig	exon	43661171	43661712	98	-	.	Parent=comp154729_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	43661499	43661546	.	-	0	Parent=comp154729_c0_seq1.mrna1
Chr1	gffcl	locus	43724453	43724996	.	-	.	ID=RLOC_00007519;geneIDs=comp146136_c1_seq1.path1;transcripts=comp146136_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43724453	43724996	.	-	.	ID=comp146136_c1_seq1.mrna1;geneID=comp146136_c1_seq1.path1;Name=comp146136_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=542;mismatches=2;indels=1;unknowns=0;Target=comp146136_c1_seq1 545 1 .;CDS_Target=comp146136_c1_seq1 237 49 .;locus=RLOC_00007519
Chr1	stalkie_big_nohaplotig	exon	43724453	43724996	99	-	.	Parent=comp146136_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	43724761	43724948	.	-	0	Parent=comp146136_c1_seq1.mrna1
Chr1	gffcl	locus	43725512	43725958	.	+	.	ID=RLOC_00007520;geneIDs=comp73756_c0_seq1.path1;transcripts=comp73756_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43725512	43725958	.	+	.	ID=comp73756_c0_seq1.mrna1;geneID=comp73756_c0_seq1.path1;Name=comp73756_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=446;mismatches=1;indels=0;unknowns=0;Target=comp73756_c0_seq1 447 1 .;locus=RLOC_00007520
Chr1	stalkie_big_nohaplotig	exon	43725512	43725958	99	+	.	Parent=comp73756_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	43725512	43725958	.	+	0	Parent=comp73756_c0_seq1.mrna1
Chr1	gffcl	locus	43790901	43878286	.	+	.	ID=RLOC_00007522;geneIDs=comp72641_c0_seq1.path1;transcripts=comp72641_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43790901	43878286	.	+	.	ID=comp72641_c0_seq1.mrna1;geneID=comp72641_c0_seq1.path1;Name=comp72641_c0_seq1;Dir=indeterminatecoverage=74.9;identity=97.5;matches=477;mismatches=10;indels=2;unknowns=0;Target=comp72641_c0_seq1 545 303 .;locus=RLOC_00007522
Chr1	stalkie_big_nohaplotig	exon	43790901	43790909	100	+	.	Parent=comp72641_c0_seq1.mrna1;Target=comp72641_c0_seq1 172 164 .
Chr1	stalkie_big_nohaplotig	exon	43803788	43803800	100	+	.	Parent=comp72641_c0_seq1.mrna1;Target=comp72641_c0_seq1 185 173 .
Chr1	stalkie_big_nohaplotig	exon	43809829	43809839	100	+	.	Parent=comp72641_c0_seq1.mrna1;Target=comp72641_c0_seq1 203 193 .
Chr1	stalkie_big_nohaplotig	exon	43826236	43826239	100	+	.	Parent=comp72641_c0_seq1.mrna1;Target=comp72641_c0_seq1 221 218 .
Chr1	stalkie_big_nohaplotig	exon	43832043	43832048	100	+	.	Parent=comp72641_c0_seq1.mrna1;Target=comp72641_c0_seq1 227 222 .
Chr1	stalkie_big_nohaplotig	exon	43835821	43835833	92	+	.	Parent=comp72641_c0_seq1.mrna1;Target=comp72641_c0_seq1 240 228 .
Chr1	stalkie_big_nohaplotig	exon	43843159	43843173	80	+	.	Parent=comp72641_c0_seq1.mrna1;Target=comp72641_c0_seq1 255 241 .
Chr1	stalkie_big_nohaplotig	exon	43860925	43860942	77	+	.	Parent=comp72641_c0_seq1.mrna1;Target=comp72641_c0_seq1 271 256 .
Chr1	stalkie_big_nohaplotig	exon	43869466	43869472	100	+	.	Parent=comp72641_c0_seq1.mrna1;Target=comp72641_c0_seq1 278 272 .
Chr1	stalkie_big_nohaplotig	exon	43877896	43878286	98	+	.	Parent=comp72641_c0_seq1.mrna1;Target=comp72641_c0_seq1 682 292 .
Chr1	stalkie_big_nohaplotig	CDS	43877907	43878149	.	+	0	Parent=comp72641_c0_seq1.mrna1
Chr1	gffcl	locus	43797773	43798261	.	-	.	ID=RLOC_00007523;geneIDs=comp157122_c0_seq1.path7;transcripts=comp157122_c0_seq1.mrna7
Chr1	stalkie_big_nohaplotig	mRNA	43797773	43798261	.	-	.	ID=comp157122_c0_seq1.mrna7;geneID=comp157122_c0_seq1.path7;Name=comp157122_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.5;matches=473;mismatches=6;indels=11;unknowns=0;Target=comp157122_c0_seq1 480 1 .;CDS_Target=comp157122_c0_seq1 480 244 .;locus=RLOC_00007523
Chr1	stalkie_big_nohaplotig	exon	43797773	43798261	96	-	.	Parent=comp157122_c0_seq1.mrna7
Chr1	stalkie_big_nohaplotig	CDS	43797773	43798009	.	-	0	Parent=comp157122_c0_seq1.mrna7
Chr1	gffcl	locus	43812853	43813695	.	+	.	ID=RLOC_00007524;geneIDs=comp1370808_c0_seq1.path1;transcripts=comp1370808_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43812853	43813695	.	+	.	ID=comp1370808_c0_seq1.mrna1;geneID=comp1370808_c0_seq1.path1;Name=comp1370808_c0_seq1;Dir=sensecoverage=100.0;identity=99.2;matches=769;mismatches=6;indels=0;unknowns=0;Target=comp1370808_c0_seq1 347 427 +;locus=RLOC_00007524
Chr1	stalkie_big_nohaplotig	exon	43812853	43813151	98	+	.	Parent=comp1370808_c0_seq1.mrna1;Target=comp1370808_c0_seq1 1 299 +
Chr1	stalkie_big_nohaplotig	exon	43813220	43813695	99	+	.	Parent=comp1370808_c0_seq1.mrna1;Target=comp1370808_c0_seq1 300 775 +
Chr1	stalkie_big_nohaplotig	CDS	43813267	43813347	.	+	0	Parent=comp1370808_c0_seq1.mrna1
Chr1	gffcl	locus	43914657	43915295	.	+	.	ID=RLOC_00007525;geneIDs=comp147151_c0_seq1.path1;transcripts=comp147151_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43914657	43915295	.	+	.	ID=comp147151_c0_seq1.mrna1;geneID=comp147151_c0_seq1.path1;Name=comp147151_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=575;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007525
Chr1	stalkie_big_nohaplotig	exon	43914657	43914825	98	+	.	Parent=comp147151_c0_seq1.mrna1;Target=comp147151_c0_seq1 1 169 +
Chr1	stalkie_big_nohaplotig	exon	43914887	43915295	100	+	.	Parent=comp147151_c0_seq1.mrna1;Target=comp147151_c0_seq1 170 578 +
Chr1	stalkie_big_nohaplotig	CDS	43914766	43914825	.	+	0	Parent=comp147151_c0_seq1.mrna1;Target=comp147151_c0_seq1 110 169 +
Chr1	stalkie_big_nohaplotig	CDS	43914887	43915258	.	+	0	Parent=comp147151_c0_seq1.mrna1;Target=comp147151_c0_seq1 170 541 +
Chr1	gffcl	locus	43921403	43976138	.	-	.	ID=RLOC_00007526;geneIDs=comp151711_c0_seq1.path1;transcripts=comp151711_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43921403	43976138	.	-	.	ID=comp151711_c0_seq1.mrna1;geneID=comp151711_c0_seq1.path1;Name=comp151711_c0_seq1;Dir=sensecoverage=53.5;identity=97.2;matches=563;mismatches=13;indels=3;unknowns=0;locus=RLOC_00007526
Chr1	stalkie_big_nohaplotig	exon	43921403	43921874	99	-	.	Parent=comp151711_c0_seq1.mrna1;Target=comp151711_c0_seq1 606 1077 +
Chr1	stalkie_big_nohaplotig	exon	43921936	43921988	100	-	.	Parent=comp151711_c0_seq1.mrna1;Target=comp151711_c0_seq1 553 605 +
Chr1	stalkie_big_nohaplotig	exon	43934072	43934099	57	-	.	Parent=comp151711_c0_seq1.mrna1;Target=comp151711_c0_seq1 528 552 +
Chr1	stalkie_big_nohaplotig	exon	43936768	43936778	81	-	.	Parent=comp151711_c0_seq1.mrna1;Target=comp151711_c0_seq1 517 527 +
Chr1	stalkie_big_nohaplotig	exon	43947324	43947329	100	-	.	Parent=comp151711_c0_seq1.mrna1;Target=comp151711_c0_seq1 511 516 +
Chr1	stalkie_big_nohaplotig	exon	43970544	43970546	100	-	.	Parent=comp151711_c0_seq1.mrna1;Target=comp151711_c0_seq1 508 510 +
Chr1	stalkie_big_nohaplotig	exon	43976133	43976138	100	-	.	Parent=comp151711_c0_seq1.mrna1;Target=comp151711_c0_seq1 502 507 +
Chr1	stalkie_big_nohaplotig	CDS	43921524	43921874	.	-	0	Parent=comp151711_c0_seq1.mrna1;Target=comp151711_c0_seq1 606 956 +
Chr1	stalkie_big_nohaplotig	CDS	43921936	43921988	.	-	2	Parent=comp151711_c0_seq1.mrna1;Target=comp151711_c0_seq1 553 605 +
Chr1	stalkie_big_nohaplotig	CDS	43934072	43934099	.	-	0	Parent=comp151711_c0_seq1.mrna1;Target=comp151711_c0_seq1 528 552 +
Chr1	stalkie_big_nohaplotig	CDS	43936768	43936778	.	-	2	Parent=comp151711_c0_seq1.mrna1;Target=comp151711_c0_seq1 517 527 +
Chr1	stalkie_big_nohaplotig	CDS	43947324	43947329	.	-	2	Parent=comp151711_c0_seq1.mrna1;Target=comp151711_c0_seq1 511 516 +
Chr1	stalkie_big_nohaplotig	CDS	43970544	43970546	.	-	2	Parent=comp151711_c0_seq1.mrna1;Target=comp151711_c0_seq1 508 510 +
Chr1	stalkie_big_nohaplotig	CDS	43976133	43976136	.	-	0	Parent=comp151711_c0_seq1.mrna1;Target=comp151711_c0_seq1 504 507 +
Chr1	gffcl	locus	43997767	43998020	.	+	.	ID=RLOC_00007527;geneIDs=comp119260_c0_seq1.path1;transcripts=comp119260_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	43997767	43998020	.	+	.	ID=comp119260_c0_seq1.mrna1;geneID=comp119260_c0_seq1.path1;Name=comp119260_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=251;mismatches=2;indels=1;unknowns=0;Target=comp119260_c0_seq1 253 1 .;CDS_Target=comp119260_c0_seq1 242 165 .;locus=RLOC_00007527
Chr1	stalkie_big_nohaplotig	exon	43997767	43998020	98	+	.	Parent=comp119260_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	43997932	43998009	.	+	0	Parent=comp119260_c0_seq1.mrna1
Chr1	gffcl	locus	44039044	44045028	.	+	.	ID=RLOC_00007528;geneIDs=FBgn0036768.1.path1;transcripts=FBgn0036768.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	44039044	44045028	.	+	.	ID=FBgn0036768.1.mrna1;geneID=FBgn0036768.1.path1;Name=FBgn0036768.1;Dir=sensecoverage=100.0;identity=99.3;matches=1874;mismatches=11;indels=2;unknowns=0;Target=FBgn0036768.1 2 31 +;locus=RLOC_00007528
Chr1	stalkie_big_nohaplotig	exon	44039044	44039308	98	+	.	Parent=FBgn0036768.1.mrna1;Target=FBgn0036768.1 1 267 +
Chr1	stalkie_big_nohaplotig	exon	44041788	44041947	99	+	.	Parent=FBgn0036768.1.mrna1;Target=FBgn0036768.1 268 427 +
Chr1	stalkie_big_nohaplotig	exon	44042079	44042305	99	+	.	Parent=FBgn0036768.1.mrna1;Target=FBgn0036768.1 428 654 +
Chr1	stalkie_big_nohaplotig	exon	44042375	44042633	99	+	.	Parent=FBgn0036768.1.mrna1;Target=FBgn0036768.1 655 913 +
Chr1	stalkie_big_nohaplotig	exon	44043988	44044145	99	+	.	Parent=FBgn0036768.1.mrna1;Target=FBgn0036768.1 914 1071 +
Chr1	stalkie_big_nohaplotig	exon	44044213	44045028	99	+	.	Parent=FBgn0036768.1.mrna1;Target=FBgn0036768.1 1072 1887 +
Chr1	stalkie_big_nohaplotig	CDS	44039045	44039072	.	+	0	Parent=FBgn0036768.1.mrna1
Chr1	gffcl	locus	44051757	44052663	.	.	.	ID=RLOC_00007529;geneIDs=FBgn0036769.1.path1,comp135247_c0_seq1.path1;transcripts=FBgn0036769.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	44051757	44052603	.	-	.	ID=FBgn0036769.1.mrna1;geneID=FBgn0036769.1.path1;Name=FBgn0036769.1;Dir=sensecoverage=76.1;identity=99.7;matches=628;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007529
Chr1	stalkie_big_nohaplotig	exon	44051757	44051801	100	-	.	Parent=FBgn0036769.1.mrna1;Target=FBgn0036769.1 784 828 +
Chr1	stalkie_big_nohaplotig	exon	44051871	44052167	99	-	.	Parent=FBgn0036769.1.mrna1;Target=FBgn0036769.1 487 783 +
Chr1	stalkie_big_nohaplotig	exon	44052231	44052326	100	-	.	Parent=FBgn0036769.1.mrna1;Target=FBgn0036769.1 391 486 +
Chr1	stalkie_big_nohaplotig	exon	44052412	44052603	100	-	.	Parent=FBgn0036769.1.mrna1;Target=FBgn0036769.1 199 390 +
Chr1	stalkie_big_nohaplotig	CDS	44051757	44051801	.	-	0	Parent=FBgn0036769.1.mrna1;Target=FBgn0036769.1 784 828 +
Chr1	stalkie_big_nohaplotig	CDS	44051871	44052167	.	-	0	Parent=FBgn0036769.1.mrna1;Target=FBgn0036769.1 487 783 +
Chr1	stalkie_big_nohaplotig	CDS	44052231	44052326	.	-	0	Parent=FBgn0036769.1.mrna1;Target=FBgn0036769.1 391 486 +
Chr1	stalkie_big_nohaplotig	CDS	44052412	44052603	.	-	0	Parent=FBgn0036769.1.mrna1;Target=FBgn0036769.1 199 390 +
Chr1	gffcl	locus	44079581	44088814	.	-	.	ID=RLOC_00007530;geneIDs=FBgn0036765.1.path1;transcripts=FBgn0036765.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	44079581	44088814	.	-	.	ID=FBgn0036765.1.mrna1;geneID=FBgn0036765.1.path1;Name=FBgn0036765.1;Dir=sensecoverage=100.0;identity=99.0;matches=1794;mismatches=18;indels=0;unknowns=0;locus=RLOC_00007530
Chr1	stalkie_big_nohaplotig	exon	44079581	44080411	99	-	.	Parent=FBgn0036765.1.mrna1;Target=FBgn0036765.1 982 1812 +
Chr1	stalkie_big_nohaplotig	exon	44080477	44080634	98	-	.	Parent=FBgn0036765.1.mrna1;Target=FBgn0036765.1 824 981 +
Chr1	stalkie_big_nohaplotig	exon	44082621	44082882	97	-	.	Parent=FBgn0036765.1.mrna1;Target=FBgn0036765.1 562 823 +
Chr1	stalkie_big_nohaplotig	exon	44082941	44083167	97	-	.	Parent=FBgn0036765.1.mrna1;Target=FBgn0036765.1 335 561 +
Chr1	stalkie_big_nohaplotig	exon	44083236	44083395	100	-	.	Parent=FBgn0036765.1.mrna1;Target=FBgn0036765.1 175 334 +
Chr1	stalkie_big_nohaplotig	exon	44083452	44083592	99	-	.	Parent=FBgn0036765.1.mrna1;Target=FBgn0036765.1 34 174 +
Chr1	stalkie_big_nohaplotig	exon	44088782	44088814	100	-	.	Parent=FBgn0036765.1.mrna1;Target=FBgn0036765.1 1 33 +
Chr1	stalkie_big_nohaplotig	CDS	44079581	44080411	.	-	0	Parent=FBgn0036765.1.mrna1;Target=FBgn0036765.1 982 1812 +
Chr1	stalkie_big_nohaplotig	CDS	44080477	44080634	.	-	2	Parent=FBgn0036765.1.mrna1;Target=FBgn0036765.1 824 981 +
Chr1	stalkie_big_nohaplotig	CDS	44082621	44082882	.	-	0	Parent=FBgn0036765.1.mrna1;Target=FBgn0036765.1 562 823 +
Chr1	stalkie_big_nohaplotig	CDS	44082941	44083167	.	-	2	Parent=FBgn0036765.1.mrna1;Target=FBgn0036765.1 335 561 +
Chr1	stalkie_big_nohaplotig	CDS	44083236	44083395	.	-	0	Parent=FBgn0036765.1.mrna1;Target=FBgn0036765.1 175 334 +
Chr1	stalkie_big_nohaplotig	CDS	44083452	44083592	.	-	0	Parent=FBgn0036765.1.mrna1;Target=FBgn0036765.1 34 174 +
Chr1	stalkie_big_nohaplotig	CDS	44088782	44088814	.	-	0	Parent=FBgn0036765.1.mrna1;Target=FBgn0036765.1 1 33 +
Chr1	gffcl	locus	44091160	44096572	.	-	.	ID=RLOC_00007531;geneIDs=FBgn0052191.1.path1;transcripts=FBgn0052191.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	44091160	44096572	.	-	.	ID=FBgn0052191.1.mrna1;geneID=FBgn0052191.1.path1;Name=FBgn0052191.1;Dir=sensecoverage=100.0;identity=99.2;matches=1764;mismatches=15;indels=0;unknowns=0;locus=RLOC_00007531
Chr1	stalkie_big_nohaplotig	exon	44091160	44091251	98	-	.	Parent=FBgn0052191.1.mrna1;Target=FBgn0052191.1 1688 1779 +
Chr1	stalkie_big_nohaplotig	exon	44091311	44092052	98	-	.	Parent=FBgn0052191.1.mrna1;Target=FBgn0052191.1 946 1687 +
Chr1	stalkie_big_nohaplotig	exon	44092121	44092278	100	-	.	Parent=FBgn0052191.1.mrna1;Target=FBgn0052191.1 788 945 +
Chr1	stalkie_big_nohaplotig	exon	44095554	44095812	99	-	.	Parent=FBgn0052191.1.mrna1;Target=FBgn0052191.1 529 787 +
Chr1	stalkie_big_nohaplotig	exon	44095880	44096106	98	-	.	Parent=FBgn0052191.1.mrna1;Target=FBgn0052191.1 302 528 +
Chr1	stalkie_big_nohaplotig	exon	44096194	44096353	98	-	.	Parent=FBgn0052191.1.mrna1;Target=FBgn0052191.1 142 301 +
Chr1	stalkie_big_nohaplotig	exon	44096432	44096572	100	-	.	Parent=FBgn0052191.1.mrna1;Target=FBgn0052191.1 1 141 +
Chr1	stalkie_big_nohaplotig	CDS	44091160	44091251	.	-	2	Parent=FBgn0052191.1.mrna1;Target=FBgn0052191.1 1688 1779 +
Chr1	stalkie_big_nohaplotig	CDS	44091311	44092052	.	-	0	Parent=FBgn0052191.1.mrna1;Target=FBgn0052191.1 946 1687 +
Chr1	stalkie_big_nohaplotig	CDS	44092121	44092278	.	-	2	Parent=FBgn0052191.1.mrna1;Target=FBgn0052191.1 788 945 +
Chr1	stalkie_big_nohaplotig	CDS	44095554	44095812	.	-	0	Parent=FBgn0052191.1.mrna1;Target=FBgn0052191.1 529 787 +
Chr1	stalkie_big_nohaplotig	CDS	44095880	44096106	.	-	2	Parent=FBgn0052191.1.mrna1;Target=FBgn0052191.1 302 528 +
Chr1	stalkie_big_nohaplotig	CDS	44096194	44096353	.	-	0	Parent=FBgn0052191.1.mrna1;Target=FBgn0052191.1 142 301 +
Chr1	stalkie_big_nohaplotig	CDS	44096432	44096572	.	-	0	Parent=FBgn0052191.1.mrna1;Target=FBgn0052191.1 1 141 +
Chr1	gffcl	locus	44102761	44104265	.	-	.	ID=RLOC_00007532;geneIDs=FBgn0036756.1.path1;transcripts=FBgn0036756.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	44102761	44104265	.	-	.	ID=FBgn0036756.1.mrna1;geneID=FBgn0036756.1.path1;Name=FBgn0036756.1;Dir=sensecoverage=100.0;identity=99.9;matches=1256;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007532
Chr1	stalkie_big_nohaplotig	exon	44102761	44103192	99	-	.	Parent=FBgn0036756.1.mrna1;Target=FBgn0036756.1 826 1257 +
Chr1	stalkie_big_nohaplotig	exon	44103252	44103585	100	-	.	Parent=FBgn0036756.1.mrna1;Target=FBgn0036756.1 492 825 +
Chr1	stalkie_big_nohaplotig	exon	44103654	44103812	100	-	.	Parent=FBgn0036756.1.mrna1;Target=FBgn0036756.1 333 491 +
Chr1	stalkie_big_nohaplotig	exon	44103879	44104018	100	-	.	Parent=FBgn0036756.1.mrna1;Target=FBgn0036756.1 193 332 +
Chr1	stalkie_big_nohaplotig	exon	44104074	44104265	100	-	.	Parent=FBgn0036756.1.mrna1;Target=FBgn0036756.1 1 192 +
Chr1	stalkie_big_nohaplotig	CDS	44102761	44103192	.	-	0	Parent=FBgn0036756.1.mrna1;Target=FBgn0036756.1 826 1257 +
Chr1	stalkie_big_nohaplotig	CDS	44103252	44103585	.	-	1	Parent=FBgn0036756.1.mrna1;Target=FBgn0036756.1 492 825 +
Chr1	stalkie_big_nohaplotig	CDS	44103654	44103812	.	-	1	Parent=FBgn0036756.1.mrna1;Target=FBgn0036756.1 333 491 +
Chr1	stalkie_big_nohaplotig	CDS	44103879	44104018	.	-	0	Parent=FBgn0036756.1.mrna1;Target=FBgn0036756.1 193 332 +
Chr1	stalkie_big_nohaplotig	CDS	44104074	44104265	.	-	0	Parent=FBgn0036756.1.mrna1;Target=FBgn0036756.1 1 192 +
Chr1	gffcl	locus	44149302	44150166	.	-	.	ID=RLOC_00007533;geneIDs=FBgn0036460.3.path1;transcripts=FBgn0036460.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	44149302	44150166	.	-	.	ID=FBgn0036460.3.mrna1;geneID=FBgn0036460.3.path1;Name=FBgn0036460.3;Dir=indeterminatecoverage=98.7;identity=99.9;matches=864;mismatches=1;indels=0;unknowns=0;Target=FBgn0036460.3 865 1 .;CDS_Target=FBgn0036460.3 864 1 .;locus=RLOC_00007533
Chr1	stalkie_big_nohaplotig	exon	44149302	44150166	99	-	.	Parent=FBgn0036460.3.mrna1
Chr1	stalkie_big_nohaplotig	CDS	44149303	44150166	.	-	0	Parent=FBgn0036460.3.mrna1
Chr1	gffcl	locus	44199488	44202195	.	+	.	ID=RLOC_00007534;geneIDs=FBgn0036772.1.path1;transcripts=FBgn0036772.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	44199488	44202195	.	+	.	ID=FBgn0036772.1.mrna1;geneID=FBgn0036772.1.path1;Name=FBgn0036772.1;Dir=sensecoverage=100.0;identity=98.7;matches=2384;mismatches=31;indels=0;unknowns=0;locus=RLOC_00007534
Chr1	stalkie_big_nohaplotig	exon	44199488	44199587	97	+	.	Parent=FBgn0036772.1.mrna1;Target=FBgn0036772.1 1 100 +
Chr1	stalkie_big_nohaplotig	exon	44199639	44200003	97	+	.	Parent=FBgn0036772.1.mrna1;Target=FBgn0036772.1 101 465 +
Chr1	stalkie_big_nohaplotig	exon	44200066	44200324	99	+	.	Parent=FBgn0036772.1.mrna1;Target=FBgn0036772.1 466 724 +
Chr1	stalkie_big_nohaplotig	exon	44200382	44200622	97	+	.	Parent=FBgn0036772.1.mrna1;Target=FBgn0036772.1 725 965 +
Chr1	stalkie_big_nohaplotig	exon	44200680	44201520	98	+	.	Parent=FBgn0036772.1.mrna1;Target=FBgn0036772.1 966 1806 +
Chr1	stalkie_big_nohaplotig	exon	44201587	44202195	99	+	.	Parent=FBgn0036772.1.mrna1;Target=FBgn0036772.1 1807 2415 +
Chr1	stalkie_big_nohaplotig	CDS	44199488	44199587	.	+	0	Parent=FBgn0036772.1.mrna1;Target=FBgn0036772.1 1 100 +
Chr1	stalkie_big_nohaplotig	CDS	44199639	44200003	.	+	2	Parent=FBgn0036772.1.mrna1;Target=FBgn0036772.1 101 465 +
Chr1	stalkie_big_nohaplotig	CDS	44200066	44200324	.	+	0	Parent=FBgn0036772.1.mrna1;Target=FBgn0036772.1 466 724 +
Chr1	stalkie_big_nohaplotig	CDS	44200382	44200622	.	+	2	Parent=FBgn0036772.1.mrna1;Target=FBgn0036772.1 725 965 +
Chr1	stalkie_big_nohaplotig	CDS	44200680	44201520	.	+	1	Parent=FBgn0036772.1.mrna1;Target=FBgn0036772.1 966 1806 +
Chr1	stalkie_big_nohaplotig	CDS	44201587	44202195	.	+	0	Parent=FBgn0036772.1.mrna1;Target=FBgn0036772.1 1807 2415 +
Chr1	gffcl	locus	44202420	44203594	.	-	.	ID=RLOC_00007535;geneIDs=FBgn0036771.1.path1;transcripts=FBgn0036771.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	44202420	44203594	.	-	.	ID=FBgn0036771.1.mrna1;geneID=FBgn0036771.1.path1;Name=FBgn0036771.1;Dir=sensecoverage=100.0;identity=99.4;matches=1109;mismatches=7;indels=0;unknowns=0;locus=RLOC_00007535
Chr1	stalkie_big_nohaplotig	exon	44202420	44203251	99	-	.	Parent=FBgn0036771.1.mrna1;Target=FBgn0036771.1 285 1116 +
Chr1	stalkie_big_nohaplotig	exon	44203311	44203594	99	-	.	Parent=FBgn0036771.1.mrna1;Target=FBgn0036771.1 1 284 +
Chr1	stalkie_big_nohaplotig	CDS	44202420	44203251	.	-	1	Parent=FBgn0036771.1.mrna1;Target=FBgn0036771.1 285 1116 +
Chr1	stalkie_big_nohaplotig	CDS	44203311	44203594	.	-	0	Parent=FBgn0036771.1.mrna1;Target=FBgn0036771.1 1 284 +
Chr1	gffcl	locus	44228255	44229309	.	+	.	ID=RLOC_00007536;geneIDs=comp161583_c0_seq1.path1;transcripts=comp161583_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	44228255	44229309	.	+	.	ID=comp161583_c0_seq1.mrna1;geneID=comp161583_c0_seq1.path1;Name=comp161583_c0_seq1;Dir=indeterminatecoverage=94.9;identity=92.0;matches=1034;mismatches=14;indels=76;unknowns=0;Target=comp161583_c0_seq1 1177 61 .;CDS_Target=comp161583_c0_seq1 648 472 .;locus=RLOC_00007536
Chr1	stalkie_big_nohaplotig	exon	44228255	44229309	91	+	.	Parent=comp161583_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	44228673	44228841	.	+	0	Parent=comp161583_c0_seq1.mrna1
Chr1	gffcl	locus	44243880	44249175	.	+	.	ID=RLOC_00007537;geneIDs=FBgn0036770.1.path1;transcripts=FBgn0036770.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	44243880	44249175	.	+	.	ID=FBgn0036770.1.mrna1;geneID=FBgn0036770.1.path1;Name=FBgn0036770.1;Dir=sensecoverage=98.1;identity=99.5;matches=2319;mismatches=12;indels=0;unknowns=0;locus=RLOC_00007537
Chr1	stalkie_big_nohaplotig	exon	44243880	44244208	98	+	.	Parent=FBgn0036770.1.mrna1;Target=FBgn0036770.1 46 374 +
Chr1	stalkie_big_nohaplotig	exon	44246878	44247427	99	+	.	Parent=FBgn0036770.1.mrna1;Target=FBgn0036770.1 375 924 +
Chr1	stalkie_big_nohaplotig	exon	44247494	44248237	99	+	.	Parent=FBgn0036770.1.mrna1;Target=FBgn0036770.1 925 1668 +
Chr1	stalkie_big_nohaplotig	exon	44248324	44248472	100	+	.	Parent=FBgn0036770.1.mrna1;Target=FBgn0036770.1 1669 1817 +
Chr1	stalkie_big_nohaplotig	exon	44248617	44249175	99	+	.	Parent=FBgn0036770.1.mrna1;Target=FBgn0036770.1 1818 2376 +
Chr1	stalkie_big_nohaplotig	CDS	44243880	44244208	.	+	0	Parent=FBgn0036770.1.mrna1;Target=FBgn0036770.1 46 374 +
Chr1	stalkie_big_nohaplotig	CDS	44246878	44247427	.	+	1	Parent=FBgn0036770.1.mrna1;Target=FBgn0036770.1 375 924 +
Chr1	stalkie_big_nohaplotig	CDS	44247494	44248237	.	+	0	Parent=FBgn0036770.1.mrna1;Target=FBgn0036770.1 925 1668 +
Chr1	stalkie_big_nohaplotig	CDS	44248324	44248472	.	+	0	Parent=FBgn0036770.1.mrna1;Target=FBgn0036770.1 1669 1817 +
Chr1	stalkie_big_nohaplotig	CDS	44248617	44249175	.	+	1	Parent=FBgn0036770.1.mrna1;Target=FBgn0036770.1 1818 2376 +
Chr1	gffcl	locus	44361789	44362806	.	-	.	ID=RLOC_00007538;geneIDs=comp162356_c1_seq1.path4;transcripts=comp162356_c1_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	44361789	44362806	.	-	.	ID=comp162356_c1_seq1.mrna4;geneID=comp162356_c1_seq1.path4;Name=comp162356_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1015;mismatches=3;indels=0;unknowns=0;Target=comp162356_c1_seq1 1018 1 .;CDS_Target=comp162356_c1_seq1 1017 1 .;locus=RLOC_00007538
Chr1	stalkie_big_nohaplotig	exon	44361789	44362806	99	-	.	Parent=comp162356_c1_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	44361790	44362806	.	-	0	Parent=comp162356_c1_seq1.mrna4
Chr1	gffcl	locus	44403301	44404419	.	+	.	ID=RLOC_00007539;geneIDs=FBgn0031483.1.path10;transcripts=FBgn0031483.1.mrna10
Chr1	stalkie_big_nohaplotig	mRNA	44403301	44404419	.	+	.	ID=FBgn0031483.1.mrna10;geneID=FBgn0031483.1.path10;Name=FBgn0031483.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1113;mismatches=6;indels=0;unknowns=0;Target=FBgn0031483.1 1119 1 .;locus=RLOC_00007539
Chr1	stalkie_big_nohaplotig	exon	44403301	44404419	99	+	.	Parent=FBgn0031483.1.mrna10
Chr1	stalkie_big_nohaplotig	CDS	44403301	44404419	.	+	0	Parent=FBgn0031483.1.mrna10
Chr1	gffcl	locus	44412932	44413949	.	+	.	ID=RLOC_00007540;geneIDs=comp162356_c1_seq1.path2;transcripts=comp162356_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	44412932	44413949	.	+	.	ID=comp162356_c1_seq1.mrna2;geneID=comp162356_c1_seq1.path2;Name=comp162356_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1016;mismatches=2;indels=0;unknowns=0;Target=comp162356_c1_seq1 1018 1 .;CDS_Target=comp162356_c1_seq1 1017 1 .;locus=RLOC_00007540
Chr1	stalkie_big_nohaplotig	exon	44412932	44413949	99	+	.	Parent=comp162356_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	44412932	44413948	.	+	0	Parent=comp162356_c1_seq1.mrna2
Chr1	gffcl	locus	44472161	44472687	.	+	.	ID=RLOC_00007541;geneIDs=FBgn0001085.1.path2;transcripts=FBgn0001085.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	44472161	44472687	.	+	.	ID=FBgn0001085.1.mrna2;geneID=FBgn0001085.1.path2;Name=FBgn0001085.1;Dir=indeterminatecoverage=29.5;identity=100.0;matches=527;mismatches=0;indels=0;unknowns=0;Target=FBgn0001085.1 1788 1262 .;locus=RLOC_00007541
Chr1	stalkie_big_nohaplotig	exon	44472161	44472687	100	+	.	Parent=FBgn0001085.1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	44472161	44472687	.	+	1	Parent=FBgn0001085.1.mrna2
Chr1	gffcl	locus	44549692	44549931	.	-	.	ID=RLOC_00007544;geneIDs=comp145673_c0_seq1.path1;transcripts=comp145673_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	44549692	44549931	.	-	.	ID=comp145673_c0_seq1.mrna1;geneID=comp145673_c0_seq1.path1;Name=comp145673_c0_seq1;Dir=indeterminatecoverage=97.6;identity=96.3;matches=233;mismatches=6;indels=3;unknowns=0;Target=comp145673_c0_seq1 247 7 .;CDS_Target=comp145673_c0_seq1 117 7 .;locus=RLOC_00007544
Chr1	stalkie_big_nohaplotig	exon	44549692	44549931	96	-	.	Parent=comp145673_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	44549821	44549931	.	-	0	Parent=comp145673_c0_seq1.mrna1
Chr1	gffcl	locus	44576652	44579005	.	+	.	ID=RLOC_00007545;geneIDs=FBgn0037059.1.path1;transcripts=FBgn0037059.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	44576652	44579005	.	+	.	ID=FBgn0037059.1.mrna1;geneID=FBgn0037059.1.path1;Name=FBgn0037059.1;Dir=sensecoverage=100.0;identity=99.9;matches=1513;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007545
Chr1	stalkie_big_nohaplotig	exon	44576652	44576843	99	+	.	Parent=FBgn0037059.1.mrna1;Target=FBgn0037059.1 1 192 +
Chr1	stalkie_big_nohaplotig	exon	44576967	44577080	100	+	.	Parent=FBgn0037059.1.mrna1;Target=FBgn0037059.1 193 306 +
Chr1	stalkie_big_nohaplotig	exon	44577144	44577282	100	+	.	Parent=FBgn0037059.1.mrna1;Target=FBgn0037059.1 307 445 +
Chr1	stalkie_big_nohaplotig	exon	44577344	44577966	100	+	.	Parent=FBgn0037059.1.mrna1;Target=FBgn0037059.1 446 1068 +
Chr1	stalkie_big_nohaplotig	exon	44578048	44578242	100	+	.	Parent=FBgn0037059.1.mrna1;Target=FBgn0037059.1 1069 1263 +
Chr1	stalkie_big_nohaplotig	exon	44578754	44579005	99	+	.	Parent=FBgn0037059.1.mrna1;Target=FBgn0037059.1 1264 1515 +
Chr1	stalkie_big_nohaplotig	CDS	44576652	44576843	.	+	0	Parent=FBgn0037059.1.mrna1;Target=FBgn0037059.1 1 192 +
Chr1	stalkie_big_nohaplotig	CDS	44576967	44577080	.	+	0	Parent=FBgn0037059.1.mrna1;Target=FBgn0037059.1 193 306 +
Chr1	stalkie_big_nohaplotig	CDS	44577144	44577282	.	+	0	Parent=FBgn0037059.1.mrna1;Target=FBgn0037059.1 307 445 +
Chr1	stalkie_big_nohaplotig	CDS	44577344	44577966	.	+	2	Parent=FBgn0037059.1.mrna1;Target=FBgn0037059.1 446 1068 +
Chr1	stalkie_big_nohaplotig	CDS	44578048	44578242	.	+	0	Parent=FBgn0037059.1.mrna1;Target=FBgn0037059.1 1069 1263 +
Chr1	stalkie_big_nohaplotig	CDS	44578754	44579005	.	+	0	Parent=FBgn0037059.1.mrna1;Target=FBgn0037059.1 1264 1515 +
Chr1	gffcl	locus	44579103	44581862	.	-	.	ID=RLOC_00007546;geneIDs=FBgn0034835.1.path2;transcripts=FBgn0034835.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	44579103	44581862	.	-	.	ID=FBgn0034835.1.mrna2;geneID=FBgn0034835.1.path2;Name=FBgn0034835.1;Dir=sensecoverage=100.0;identity=99.7;matches=909;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007546
Chr1	stalkie_big_nohaplotig	exon	44579103	44579401	99	-	.	Parent=FBgn0034835.1.mrna2;Target=FBgn0034835.1 614 912 +
Chr1	stalkie_big_nohaplotig	exon	44579620	44579818	99	-	.	Parent=FBgn0034835.1.mrna2;Target=FBgn0034835.1 415 613 +
Chr1	stalkie_big_nohaplotig	exon	44581449	44581862	99	-	.	Parent=FBgn0034835.1.mrna2;Target=FBgn0034835.1 1 414 +
Chr1	stalkie_big_nohaplotig	CDS	44579103	44579401	.	-	2	Parent=FBgn0034835.1.mrna2;Target=FBgn0034835.1 614 912 +
Chr1	stalkie_big_nohaplotig	CDS	44579620	44579818	.	-	0	Parent=FBgn0034835.1.mrna2;Target=FBgn0034835.1 415 613 +
Chr1	stalkie_big_nohaplotig	CDS	44581449	44581862	.	-	0	Parent=FBgn0034835.1.mrna2;Target=FBgn0034835.1 1 414 +
Chr1	gffcl	locus	44653634	44656955	.	+	.	ID=RLOC_00007547;geneIDs=comp157769_c0_seq1.path1;transcripts=comp157769_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	44653634	44656955	.	+	.	ID=comp157769_c0_seq1.mrna1;geneID=comp157769_c0_seq1.path1;Name=comp157769_c0_seq1;Dir=antisensecoverage=98.2;identity=99.1;matches=800;mismatches=7;indels=0;unknowns=0;locus=RLOC_00007547
Chr1	stalkie_big_nohaplotig	exon	44653634	44653820	100	+	.	Parent=comp157769_c0_seq1.mrna1;Target=comp157769_c0_seq1 623 809 -
Chr1	stalkie_big_nohaplotig	exon	44653935	44654048	99	+	.	Parent=comp157769_c0_seq1.mrna1;Target=comp157769_c0_seq1 509 622 -
Chr1	stalkie_big_nohaplotig	exon	44655143	44655268	100	+	.	Parent=comp157769_c0_seq1.mrna1;Target=comp157769_c0_seq1 383 508 -
Chr1	stalkie_big_nohaplotig	exon	44656576	44656955	98	+	.	Parent=comp157769_c0_seq1.mrna1;Target=comp157769_c0_seq1 3 382 -
Chr1	stalkie_big_nohaplotig	CDS	44653754	44653820	.	+	0	Parent=comp157769_c0_seq1.mrna1;Target=comp157769_c0_seq1 623 689 .
Chr1	stalkie_big_nohaplotig	CDS	44653935	44654048	.	+	2	Parent=comp157769_c0_seq1.mrna1;Target=comp157769_c0_seq1 509 622 .
Chr1	stalkie_big_nohaplotig	CDS	44655143	44655268	.	+	2	Parent=comp157769_c0_seq1.mrna1;Target=comp157769_c0_seq1 383 508 .
Chr1	stalkie_big_nohaplotig	CDS	44656576	44656820	.	+	2	Parent=comp157769_c0_seq1.mrna1;Target=comp157769_c0_seq1 138 382 .
Chr1	gffcl	locus	44750018	44750257	.	+	.	ID=RLOC_00007550;geneIDs=comp145673_c0_seq1.path2;transcripts=comp145673_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	44750018	44750257	.	+	.	ID=comp145673_c0_seq1.mrna2;geneID=comp145673_c0_seq1.path2;Name=comp145673_c0_seq1;Dir=indeterminatecoverage=97.6;identity=96.3;matches=233;mismatches=6;indels=3;unknowns=0;Target=comp145673_c0_seq1 247 7 .;CDS_Target=comp145673_c0_seq1 117 7 .;locus=RLOC_00007550
Chr1	stalkie_big_nohaplotig	exon	44750018	44750257	96	+	.	Parent=comp145673_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	44750018	44750128	.	+	0	Parent=comp145673_c0_seq1.mrna2
Chr1	gffcl	locus	44915407	44916285	.	-	.	ID=RLOC_00007552;geneIDs=FBgn0036014.2.path1;transcripts=FBgn0036014.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	44915407	44916285	.	-	.	ID=FBgn0036014.2.mrna1;geneID=FBgn0036014.2.path1;Name=FBgn0036014.2;Dir=indeterminatecoverage=100.0;identity=98.4;matches=865;mismatches=14;indels=0;unknowns=0;Target=FBgn0036014.2 879 1 .;locus=RLOC_00007552
Chr1	stalkie_big_nohaplotig	exon	44915407	44916285	98	-	.	Parent=FBgn0036014.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	44915407	44916285	.	-	0	Parent=FBgn0036014.2.mrna1
Chr1	gffcl	locus	44941370	44949765	.	.	.	ID=RLOC_00007554;geneIDs=FBgn0036014.3.path2,comp163255_c0_seq1.path2;transcripts=FBgn0036014.3.mrna2,comp163255_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	44941370	44949710	.	+	.	ID=FBgn0036014.3.mrna2;geneID=FBgn0036014.3.path2;Name=FBgn0036014.3;Dir=antisensecoverage=100.0;identity=98.7;matches=868;mismatches=11;indels=0;unknowns=0;locus=RLOC_00007554
Chr1	stalkie_big_nohaplotig	exon	44941370	44941644	99	+	.	Parent=FBgn0036014.3.mrna2;Target=FBgn0036014.3 605 879 -
Chr1	stalkie_big_nohaplotig	exon	44949107	44949710	98	+	.	Parent=FBgn0036014.3.mrna2;Target=FBgn0036014.3 1 604 -
Chr1	stalkie_big_nohaplotig	CDS	44941425	44941644	.	+	0	Parent=FBgn0036014.3.mrna2;Target=FBgn0036014.3 605 824 .
Chr1	stalkie_big_nohaplotig	CDS	44949107	44949192	.	+	2	Parent=FBgn0036014.3.mrna2;Target=FBgn0036014.3 519 604 .
Chr1	stalkie_big_nohaplotig	mRNA	44948728	44949765	.	-	.	ID=comp163255_c0_seq1.mrna2;geneID=comp163255_c0_seq1.path2;Name=comp163255_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1025;mismatches=13;indels=0;unknowns=0;Target=comp163255_c0_seq1 1038 1 .;CDS_Target=comp163255_c0_seq1 937 86 .;locus=RLOC_00007554
Chr1	stalkie_big_nohaplotig	exon	44948728	44949765	98	-	.	Parent=comp163255_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	44948829	44949680	.	-	0	Parent=comp163255_c0_seq1.mrna2
Chr1	gffcl	locus	44973126	44973967	.	-	.	ID=RLOC_00007555;geneIDs=FBgn0036014.2.path3;transcripts=FBgn0036014.2.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	44973126	44973967	.	-	.	ID=FBgn0036014.2.mrna3;geneID=FBgn0036014.2.path3;Name=FBgn0036014.2;Dir=indeterminatecoverage=95.8;identity=97.4;matches=820;mismatches=22;indels=0;unknowns=0;Target=FBgn0036014.2 842 1 .;CDS_Target=FBgn0036014.2 840 1 .;locus=RLOC_00007555
Chr1	stalkie_big_nohaplotig	exon	44973126	44973967	97	-	.	Parent=FBgn0036014.2.mrna3
Chr1	stalkie_big_nohaplotig	CDS	44973128	44973967	.	-	0	Parent=FBgn0036014.2.mrna3
Chr1	gffcl	locus	45025282	45026160	.	-	.	ID=RLOC_00007556;geneIDs=FBgn0036014.2.path2;transcripts=FBgn0036014.2.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	45025282	45026160	.	-	.	ID=FBgn0036014.2.mrna2;geneID=FBgn0036014.2.path2;Name=FBgn0036014.2;Dir=indeterminatecoverage=100.0;identity=98.4;matches=865;mismatches=14;indels=0;unknowns=0;Target=FBgn0036014.2 879 1 .;locus=RLOC_00007556
Chr1	stalkie_big_nohaplotig	exon	45025282	45026160	98	-	.	Parent=FBgn0036014.2.mrna2
Chr1	stalkie_big_nohaplotig	CDS	45025282	45026160	.	-	0	Parent=FBgn0036014.2.mrna2
Chr1	gffcl	locus	45070416	45072085	.	+	.	ID=RLOC_00007557;geneIDs=comp158871_c0_seq1.path2;transcripts=comp158871_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	45070416	45072085	.	+	.	ID=comp158871_c0_seq1.mrna2;geneID=comp158871_c0_seq1.path2;Name=comp158871_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.1;matches=1655;mismatches=15;indels=0;unknowns=0;Target=comp158871_c0_seq1 1684 15 .;CDS_Target=comp158871_c0_seq1 1684 17 .;locus=RLOC_00007557
Chr1	stalkie_big_nohaplotig	exon	45070416	45072085	99	+	.	Parent=comp158871_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	45070418	45072085	.	+	0	Parent=comp158871_c0_seq1.mrna2
Chr1	gffcl	locus	45097482	45249044	.	+	.	ID=RLOC_00007558;geneIDs=comp161051_c0_seq1.path1,comp163143_c5_seq1.path1;transcripts=comp161051_c0_seq1.mrna1,comp163143_c5_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45097482	45099301	.	+	.	ID=comp161051_c0_seq1.mrna1;geneID=comp161051_c0_seq1.path1;Name=comp161051_c0_seq1;Dir=indeterminatecoverage=95.9;identity=97.0;matches=1780;mismatches=40;indels=15;unknowns=0;Target=comp161051_c0_seq1 1835 1 .;CDS_Target=comp161051_c0_seq1 1819 1655 .;locus=RLOC_00007558
Chr1	stalkie_big_nohaplotig	exon	45097482	45099301	97	+	.	Parent=comp161051_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	45099121	45099285	.	+	0	Parent=comp161051_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45097543	45249044	.	+	.	ID=comp163143_c5_seq1.mrna1;geneID=comp163143_c5_seq1.path1;Name=comp163143_c5_seq1;Dir=indeterminatecoverage=86.4;identity=95.6;matches=1858;mismatches=67;indels=19;unknowns=0;locus=RLOC_00007558
Chr1	stalkie_big_nohaplotig	exon	45097543	45097550	100	+	.	Parent=comp163143_c5_seq1.mrna1;Target=comp163143_c5_seq1 123 116 .
Chr1	stalkie_big_nohaplotig	exon	45100194	45100206	100	+	.	Parent=comp163143_c5_seq1.mrna1;Target=comp163143_c5_seq1 136 124 .
Chr1	stalkie_big_nohaplotig	exon	45101208	45101214	100	+	.	Parent=comp163143_c5_seq1.mrna1;Target=comp163143_c5_seq1 143 137 .
Chr1	stalkie_big_nohaplotig	exon	45114058	45114059	100	+	.	Parent=comp163143_c5_seq1.mrna1;Target=comp163143_c5_seq1 145 144 .
Chr1	stalkie_big_nohaplotig	exon	45220228	45221244	99	+	.	Parent=comp163143_c5_seq1.mrna1;Target=comp163143_c5_seq1 1161 146 .
Chr1	stalkie_big_nohaplotig	exon	45246982	45247662	95	+	.	Parent=comp163143_c5_seq1.mrna1;Target=comp163143_c5_seq1 1844 1162 .
Chr1	stalkie_big_nohaplotig	exon	45248831	45249044	78	+	.	Parent=comp163143_c5_seq1.mrna1;Target=comp163143_c5_seq1 2042 1845 .
Chr1	stalkie_big_nohaplotig	CDS	45220455	45221244	.	+	0	Parent=comp163143_c5_seq1.mrna1;Target=comp163143_c5_seq1 1161 373 .
Chr1	stalkie_big_nohaplotig	CDS	45246982	45247005	.	+	2	Parent=comp163143_c5_seq1.mrna1;Target=comp163143_c5_seq1 1185 1162 .
Chr1	gffcl	locus	45105209	45105507	.	+	.	ID=RLOC_00007559;geneIDs=comp143668_c0_seq1.path1;transcripts=comp143668_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45105209	45105507	.	+	.	ID=comp143668_c0_seq1.mrna1;geneID=comp143668_c0_seq1.path1;Name=comp143668_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=292;mismatches=7;indels=0;unknowns=0;Target=comp143668_c0_seq1 299 1 .;CDS_Target=comp143668_c0_seq1 298 2 .;locus=RLOC_00007559
Chr1	stalkie_big_nohaplotig	exon	45105209	45105507	97	+	.	Parent=comp143668_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	45105210	45105506	.	+	0	Parent=comp143668_c0_seq1.mrna1
Chr1	gffcl	locus	45148492	45149184	.	+	.	ID=RLOC_00007561;geneIDs=comp156591_c0_seq1.path4;transcripts=comp156591_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	45148492	45149184	.	+	.	ID=comp156591_c0_seq1.mrna4;geneID=comp156591_c0_seq1.path4;Name=comp156591_c0_seq1;Dir=indeterminatecoverage=89.4;identity=98.7;matches=689;mismatches=3;indels=6;unknowns=0;Target=comp156591_c0_seq1 780 84 .;CDS_Target=comp156591_c0_seq1 702 514 .;locus=RLOC_00007561
Chr1	stalkie_big_nohaplotig	exon	45148492	45149184	98	+	.	Parent=comp156591_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	45148919	45149106	.	+	0	Parent=comp156591_c0_seq1.mrna4
Chr1	gffcl	locus	45243452	45244252	.	-	.	ID=RLOC_00007562;geneIDs=comp987313_c0_seq1.path1;transcripts=comp987313_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45243452	45244252	.	-	.	ID=comp987313_c0_seq1.mrna1;geneID=comp987313_c0_seq1.path1;Name=comp987313_c0_seq1;Dir=indeterminatecoverage=98.0;identity=99.8;matches=799;mismatches=2;indels=0;unknowns=0;Target=comp987313_c0_seq1 817 17 .;CDS_Target=comp987313_c0_seq1 263 150 .;locus=RLOC_00007562
Chr1	stalkie_big_nohaplotig	exon	45243452	45244252	99	-	.	Parent=comp987313_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	45244006	45244119	.	-	0	Parent=comp987313_c0_seq1.mrna1
Chr1	gffcl	locus	45325883	45327970	.	-	.	ID=RLOC_00007563;geneIDs=comp160815_c2_seq1.path1;transcripts=comp160815_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45325883	45327970	.	-	.	ID=comp160815_c2_seq1.mrna1;geneID=comp160815_c2_seq1.path1;Name=comp160815_c2_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=2051;mismatches=37;indels=4;unknowns=0;Target=comp160815_c2_seq1 2093 2 .;CDS_Target=comp160815_c2_seq1 630 619 .;locus=RLOC_00007563
Chr1	stalkie_big_nohaplotig	exon	45325883	45327970	98	-	.	Parent=comp160815_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	45327342	45327353	.	-	0	Parent=comp160815_c2_seq1.mrna1
Chr1	gffcl	locus	45373609	45374269	.	+	.	ID=RLOC_00007564;geneIDs=comp63271_c0_seq1.path1;transcripts=comp63271_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45373609	45374269	.	+	.	ID=comp63271_c0_seq1.mrna1;geneID=comp63271_c0_seq1.path1;Name=comp63271_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.5;matches=658;mismatches=2;indels=1;unknowns=0;Target=comp63271_c0_seq1 670 11 .;CDS_Target=comp63271_c0_seq1 104 42 .;locus=RLOC_00007564
Chr1	stalkie_big_nohaplotig	exon	45373609	45374269	99	+	.	Parent=comp63271_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	45373640	45373702	.	+	0	Parent=comp63271_c0_seq1.mrna1
Chr1	gffcl	locus	45412268	46953671	.	+	.	ID=RLOC_00007565;geneIDs=FBgn0013718.1.path1,comp148418_c0_seq1.path1,comp159765_c2_seq1.path1;transcripts=FBgn0013718.1.mrna1,comp159765_c2_seq1.mrna1,comp148418_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45412268	45431615	.	+	.	ID=FBgn0013718.1.mrna1;geneID=FBgn0013718.1.path1;Name=FBgn0013718.1;Dir=sensecoverage=99.9;identity=99.8;matches=1268;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007565
Chr1	stalkie_big_nohaplotig	exon	45412268	45412954	99	+	.	Parent=FBgn0013718.1.mrna1;Target=FBgn0013718.1 1 687 +
Chr1	stalkie_big_nohaplotig	exon	45429214	45429348	99	+	.	Parent=FBgn0013718.1.mrna1;Target=FBgn0013718.1 688 822 +
Chr1	stalkie_big_nohaplotig	exon	45431167	45431615	99	+	.	Parent=FBgn0013718.1.mrna1;Target=FBgn0013718.1 823 1271 +
Chr1	stalkie_big_nohaplotig	CDS	45412268	45412954	.	+	0	Parent=FBgn0013718.1.mrna1;Target=FBgn0013718.1 1 687 +
Chr1	stalkie_big_nohaplotig	CDS	45429214	45429348	.	+	0	Parent=FBgn0013718.1.mrna1;Target=FBgn0013718.1 688 822 +
Chr1	stalkie_big_nohaplotig	CDS	45431167	45431613	.	+	0	Parent=FBgn0013718.1.mrna1;Target=FBgn0013718.1 823 1269 +
Chr1	stalkie_big_nohaplotig	mRNA	45429212	46953671	.	+	.	ID=comp159765_c2_seq1.mrna1;geneID=comp159765_c2_seq1.path1;Name=comp159765_c2_seq1;Dir=sensecoverage=29.3;identity=99.4;matches=1243;mismatches=5;indels=2;unknowns=0;locus=RLOC_00007565
Chr1	stalkie_big_nohaplotig	exon	45429212	45429348	99	+	.	Parent=comp159765_c2_seq1.mrna1;Target=comp159765_c2_seq1 1624 1760 +
Chr1	stalkie_big_nohaplotig	exon	45431167	45431620	99	+	.	Parent=comp159765_c2_seq1.mrna1;Target=comp159765_c2_seq1 1761 2215 +
Chr1	stalkie_big_nohaplotig	exon	45431697	45431824	100	+	.	Parent=comp159765_c2_seq1.mrna1;Target=comp159765_c2_seq1 2216 2343 +
Chr1	stalkie_big_nohaplotig	exon	45432266	45432304	100	+	.	Parent=comp159765_c2_seq1.mrna1;Target=comp159765_c2_seq1 2344 2382 +
Chr1	stalkie_big_nohaplotig	exon	45436366	45436787	99	+	.	Parent=comp159765_c2_seq1.mrna1;Target=comp159765_c2_seq1 2383 2803 +
Chr1	stalkie_big_nohaplotig	exon	46927529	46927534	100	+	.	Parent=comp159765_c2_seq1.mrna1;Target=comp159765_c2_seq1 2804 2809 +
Chr1	stalkie_big_nohaplotig	exon	46932389	46932392	100	+	.	Parent=comp159765_c2_seq1.mrna1;Target=comp159765_c2_seq1 2810 2813 +
Chr1	stalkie_big_nohaplotig	exon	46939156	46939170	100	+	.	Parent=comp159765_c2_seq1.mrna1;Target=comp159765_c2_seq1 2814 2828 +
Chr1	stalkie_big_nohaplotig	exon	46941252	46941259	100	+	.	Parent=comp159765_c2_seq1.mrna1;Target=comp159765_c2_seq1 2829 2836 +
Chr1	stalkie_big_nohaplotig	exon	46941266	46941275	100	+	.	Parent=comp159765_c2_seq1.mrna1;Target=comp159765_c2_seq1 2855 2864 +
Chr1	stalkie_big_nohaplotig	exon	46941298	46941300	100	+	.	Parent=comp159765_c2_seq1.mrna1;Target=comp159765_c2_seq1 2878 2880 +
Chr1	stalkie_big_nohaplotig	exon	46943979	46943980	100	+	.	Parent=comp159765_c2_seq1.mrna1;Target=comp159765_c2_seq1 2881 2882 +
Chr1	stalkie_big_nohaplotig	exon	46945724	46945728	100	+	.	Parent=comp159765_c2_seq1.mrna1;Target=comp159765_c2_seq1 2883 2887 +
Chr1	stalkie_big_nohaplotig	exon	46953656	46953671	100	+	.	Parent=comp159765_c2_seq1.mrna1;Target=comp159765_c2_seq1 2888 2903 +
Chr1	stalkie_big_nohaplotig	CDS	45429214	45429348	.	+	0	Parent=comp159765_c2_seq1.mrna1;Target=comp159765_c2_seq1 1626 1760 +
Chr1	stalkie_big_nohaplotig	CDS	45431167	45431618	.	+	0	Parent=comp159765_c2_seq1.mrna1;Target=comp159765_c2_seq1 1761 2213 +
Chr1	stalkie_big_nohaplotig	mRNA	45431802	45432132	.	+	.	ID=comp148418_c0_seq1.mrna1;geneID=comp148418_c0_seq1.path1;Name=comp148418_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=327;mismatches=4;indels=0;unknowns=0;Target=comp148418_c0_seq1 331 1 .;CDS_Target=comp148418_c0_seq1 316 227 .;locus=RLOC_00007565
Chr1	stalkie_big_nohaplotig	exon	45431802	45432132	98	+	.	Parent=comp148418_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	45432028	45432117	.	+	0	Parent=comp148418_c0_seq1.mrna1
Chr1	gffcl	locus	45437754	45439263	.	-	.	ID=RLOC_00007566;geneIDs=comp160804_c0_seq1.path1;transcripts=comp160804_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45437754	45439263	.	-	.	ID=comp160804_c0_seq1.mrna1;geneID=comp160804_c0_seq1.path1;Name=comp160804_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.8;matches=1490;mismatches=20;indels=29;unknowns=0;Target=comp160804_c0_seq1 1539 1 .;CDS_Target=comp160804_c0_seq1 995 759 .;locus=RLOC_00007566
Chr1	stalkie_big_nohaplotig	exon	45437754	45439263	96	-	.	Parent=comp160804_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	45438284	45438505	.	-	0	Parent=comp160804_c0_seq1.mrna1
Chr1	gffcl	locus	45439390	45440192	.	-	.	ID=RLOC_00007567;geneIDs=comp156590_c0_seq1.path1;transcripts=comp156590_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45439390	45440192	.	-	.	ID=comp156590_c0_seq1.mrna1;geneID=comp156590_c0_seq1.path1;Name=comp156590_c0_seq1;Dir=sensecoverage=99.9;identity=100.0;matches=747;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007567
Chr1	stalkie_big_nohaplotig	exon	45439390	45439535	100	-	.	Parent=comp156590_c0_seq1.mrna1;Target=comp156590_c0_seq1 602 747 +
Chr1	stalkie_big_nohaplotig	exon	45439592	45440192	100	-	.	Parent=comp156590_c0_seq1.mrna1;Target=comp156590_c0_seq1 1 601 +
Chr1	stalkie_big_nohaplotig	CDS	45439429	45439535	.	-	2	Parent=comp156590_c0_seq1.mrna1;Target=comp156590_c0_seq1 602 708 +
Chr1	stalkie_big_nohaplotig	CDS	45439592	45440192	.	-	0	Parent=comp156590_c0_seq1.mrna1;Target=comp156590_c0_seq1 1 601 +
Chr1	gffcl	locus	45443461	45443920	.	+	.	ID=RLOC_00007568;geneIDs=comp146176_c0_seq1.path1;transcripts=comp146176_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45443461	45443920	.	+	.	ID=comp146176_c0_seq1.mrna1;geneID=comp146176_c0_seq1.path1;Name=comp146176_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=376;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007568
Chr1	stalkie_big_nohaplotig	exon	45443461	45443663	99	+	.	Parent=comp146176_c0_seq1.mrna1;Target=comp146176_c0_seq1 176 378 -
Chr1	stalkie_big_nohaplotig	exon	45443746	45443920	99	+	.	Parent=comp146176_c0_seq1.mrna1;Target=comp146176_c0_seq1 1 175 -
Chr1	stalkie_big_nohaplotig	CDS	45443639	45443663	.	+	0	Parent=comp146176_c0_seq1.mrna1;Target=comp146176_c0_seq1 176 200 .
Chr1	stalkie_big_nohaplotig	CDS	45443746	45443918	.	+	2	Parent=comp146176_c0_seq1.mrna1;Target=comp146176_c0_seq1 3 175 .
Chr1	gffcl	locus	45444002	45444538	.	-	.	ID=RLOC_00007569;geneIDs=comp150910_c0_seq1.path1;transcripts=comp150910_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45444002	45444538	.	-	.	ID=comp150910_c0_seq1.mrna1;geneID=comp150910_c0_seq1.path1;Name=comp150910_c0_seq1;Dir=indeterminatecoverage=98.7;identity=98.9;matches=531;mismatches=6;indels=0;unknowns=0;Target=comp150910_c0_seq1 544 8 .;CDS_Target=comp150910_c0_seq1 241 146 .;locus=RLOC_00007569
Chr1	stalkie_big_nohaplotig	exon	45444002	45444538	98	-	.	Parent=comp150910_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	45444305	45444400	.	-	0	Parent=comp150910_c0_seq1.mrna1
Chr1	gffcl	locus	45446644	47137208	.	+	.	ID=RLOC_00007570;geneIDs=comp153462_c0_seq1.path1;transcripts=comp153462_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45446644	47137208	.	+	.	ID=comp153462_c0_seq1.mrna1;geneID=comp153462_c0_seq1.path1;Name=comp153462_c0_seq1;Dir=sensecoverage=95.4;identity=96.1;matches=748;mismatches=17;indels=13;unknowns=0;locus=RLOC_00007570
Chr1	stalkie_big_nohaplotig	exon	45446644	45446937	95	+	.	Parent=comp153462_c0_seq1.mrna1;Target=comp153462_c0_seq1 1 298 +
Chr1	stalkie_big_nohaplotig	exon	45447006	45447427	97	+	.	Parent=comp153462_c0_seq1.mrna1;Target=comp153462_c0_seq1 299 720 +
Chr1	stalkie_big_nohaplotig	exon	47099961	47099965	100	+	.	Parent=comp153462_c0_seq1.mrna1;Target=comp153462_c0_seq1 721 725 +
Chr1	stalkie_big_nohaplotig	exon	47100313	47100318	100	+	.	Parent=comp153462_c0_seq1.mrna1;Target=comp153462_c0_seq1 726 731 +
Chr1	stalkie_big_nohaplotig	exon	47107710	47107718	100	+	.	Parent=comp153462_c0_seq1.mrna1;Target=comp153462_c0_seq1 732 740 +
Chr1	stalkie_big_nohaplotig	exon	47112680	47112682	100	+	.	Parent=comp153462_c0_seq1.mrna1;Target=comp153462_c0_seq1 741 743 +
Chr1	stalkie_big_nohaplotig	exon	47114462	47114467	100	+	.	Parent=comp153462_c0_seq1.mrna1;Target=comp153462_c0_seq1 744 749 +
Chr1	stalkie_big_nohaplotig	exon	47118870	47118871	100	+	.	Parent=comp153462_c0_seq1.mrna1;Target=comp153462_c0_seq1 750 751 +
Chr1	stalkie_big_nohaplotig	exon	47130528	47130543	43	+	.	Parent=comp153462_c0_seq1.mrna1;Target=comp153462_c0_seq1 752 758 +
Chr1	stalkie_big_nohaplotig	exon	47137198	47137208	100	+	.	Parent=comp153462_c0_seq1.mrna1;Target=comp153462_c0_seq1 759 769 +
Chr1	stalkie_big_nohaplotig	CDS	45446760	45446937	.	+	0	Parent=comp153462_c0_seq1.mrna1;Target=comp153462_c0_seq1 118 298 +
Chr1	stalkie_big_nohaplotig	CDS	45447006	45447310	.	+	2	Parent=comp153462_c0_seq1.mrna1;Target=comp153462_c0_seq1 299 603 +
Chr1	gffcl	locus	45452760	45454464	.	+	.	ID=RLOC_00007571;geneIDs=FBgn0031607.5.path1;transcripts=FBgn0031607.5.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45452760	45454464	.	+	.	ID=FBgn0031607.5.mrna1;geneID=FBgn0031607.5.path1;Name=FBgn0031607.5;Dir=sensecoverage=100.0;identity=99.7;matches=1580;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007571
Chr1	stalkie_big_nohaplotig	exon	45452760	45452804	97	+	.	Parent=FBgn0031607.5.mrna1;Target=FBgn0031607.5 1 45 +
Chr1	stalkie_big_nohaplotig	exon	45452865	45454278	99	+	.	Parent=FBgn0031607.5.mrna1;Target=FBgn0031607.5 46 1459 +
Chr1	stalkie_big_nohaplotig	exon	45454340	45454464	99	+	.	Parent=FBgn0031607.5.mrna1;Target=FBgn0031607.5 1460 1584 +
Chr1	stalkie_big_nohaplotig	CDS	45452760	45452804	.	+	0	Parent=FBgn0031607.5.mrna1;Target=FBgn0031607.5 1 45 +
Chr1	stalkie_big_nohaplotig	CDS	45452865	45454278	.	+	0	Parent=FBgn0031607.5.mrna1;Target=FBgn0031607.5 46 1459 +
Chr1	stalkie_big_nohaplotig	CDS	45454340	45454464	.	+	2	Parent=FBgn0031607.5.mrna1;Target=FBgn0031607.5 1460 1584 +
Chr1	gffcl	locus	45454785	45455312	.	-	.	ID=RLOC_00007572;geneIDs=comp148922_c0_seq1.path1;transcripts=comp148922_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45454785	45455312	.	-	.	ID=comp148922_c0_seq1.mrna1;geneID=comp148922_c0_seq1.path1;Name=comp148922_c0_seq1;Dir=antisensecoverage=78.6;identity=98.9;matches=458;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007572
Chr1	stalkie_big_nohaplotig	exon	45454785	45455099	98	-	.	Parent=comp148922_c0_seq1.mrna1;Target=comp148922_c0_seq1 127 441 -
Chr1	stalkie_big_nohaplotig	exon	45455165	45455312	100	-	.	Parent=comp148922_c0_seq1.mrna1;Target=comp148922_c0_seq1 442 589 -
Chr1	stalkie_big_nohaplotig	CDS	45454801	45455099	.	-	2	Parent=comp148922_c0_seq1.mrna1;Target=comp148922_c0_seq1 143 441 .
Chr1	stalkie_big_nohaplotig	CDS	45455165	45455192	.	-	0	Parent=comp148922_c0_seq1.mrna1;Target=comp148922_c0_seq1 442 469 .
Chr1	gffcl	locus	45458014	45459278	.	+	.	ID=RLOC_00007573;geneIDs=ORF1128.path1;transcripts=ORF1128.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45458014	45459278	.	+	.	ID=ORF1128.mrna1;geneID=ORF1128.path1;Name=ORF1128;Dir=sensecoverage=98.2;identity=99.3;matches=1191;mismatches=8;indels=0;unknowns=0;locus=RLOC_00007573
Chr1	stalkie_big_nohaplotig	exon	45458014	45458133	97	+	.	Parent=ORF1128.mrna1;Target=ORF1128 23 142 +
Chr1	stalkie_big_nohaplotig	exon	45458200	45459278	99	+	.	Parent=ORF1128.mrna1;Target=ORF1128 143 1221 +
Chr1	stalkie_big_nohaplotig	CDS	45458112	45458133	.	+	0	Parent=ORF1128.mrna1;Target=ORF1128 121 142 +
Chr1	stalkie_big_nohaplotig	CDS	45458200	45459278	.	+	2	Parent=ORF1128.mrna1;Target=ORF1128 143 1221 +
Chr1	gffcl	locus	45525771	45527052	.	-	.	ID=RLOC_00007574;geneIDs=comp157472_c0_seq1.path2;transcripts=comp157472_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	45525771	45527052	.	-	.	ID=comp157472_c0_seq1.mrna2;geneID=comp157472_c0_seq1.path2;Name=comp157472_c0_seq1;Dir=indeterminatecoverage=95.6;identity=98.0;matches=1257;mismatches=11;indels=15;unknowns=0;Target=comp157472_c0_seq1 1314 46 .;CDS_Target=comp157472_c0_seq1 669 448 .;locus=RLOC_00007574
Chr1	stalkie_big_nohaplotig	exon	45525771	45527052	97	-	.	Parent=comp157472_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	45526430	45526651	.	-	0	Parent=comp157472_c0_seq1.mrna2
Chr1	gffcl	locus	45528271	45528502	.	-	.	ID=RLOC_00007575;geneIDs=comp106700_c0_seq1.path1;transcripts=comp106700_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45528271	45528502	.	-	.	ID=comp106700_c0_seq1.mrna1;geneID=comp106700_c0_seq1.path1;Name=comp106700_c0_seq1;Dir=indeterminatecoverage=86.5;identity=88.4;matches=214;mismatches=13;indels=15;unknowns=0;Target=comp106700_c0_seq1 241 5 .;CDS_Target=comp106700_c0_seq1 98 6 .;locus=RLOC_00007575
Chr1	stalkie_big_nohaplotig	exon	45528271	45528502	88	-	.	Parent=comp106700_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	45528411	45528501	.	-	0	Parent=comp106700_c0_seq1.mrna1
Chr1	gffcl	locus	45532821	45560125	.	+	.	ID=RLOC_00007576;geneIDs=comp157472_c0_seq1.path1;transcripts=comp157472_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45532821	45560125	.	+	.	ID=comp157472_c0_seq1.mrna1;geneID=comp157472_c0_seq1.path1;Name=comp157472_c0_seq1;Dir=indeterminatecoverage=97.0;identity=99.1;matches=1277;mismatches=9;indels=2;unknowns=0;Target=comp157472_c0_seq1 669 448 .;locus=RLOC_00007576
Chr1	stalkie_big_nohaplotig	exon	45532821	45532822	100	+	.	Parent=comp157472_c0_seq1.mrna1;Target=comp157472_c0_seq1 42 41 .
Chr1	stalkie_big_nohaplotig	exon	45536902	45536903	100	+	.	Parent=comp157472_c0_seq1.mrna1;Target=comp157472_c0_seq1 44 43 .
Chr1	stalkie_big_nohaplotig	exon	45551682	45551684	100	+	.	Parent=comp157472_c0_seq1.mrna1;Target=comp157472_c0_seq1 47 45 .
Chr1	stalkie_big_nohaplotig	exon	45558846	45560125	99	+	.	Parent=comp157472_c0_seq1.mrna1;Target=comp157472_c0_seq1 1327 48 .
Chr1	stalkie_big_nohaplotig	CDS	45559245	45559466	.	+	0	Parent=comp157472_c0_seq1.mrna1
Chr1	gffcl	locus	45557389	45557593	.	+	.	ID=RLOC_00007577;geneIDs=comp106700_c0_seq1.path2;transcripts=comp106700_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	45557389	45557593	.	+	.	ID=comp106700_c0_seq1.mrna2;geneID=comp106700_c0_seq1.path2;Name=comp106700_c0_seq1;Dir=indeterminatecoverage=77.7;identity=90.2;matches=194;mismatches=9;indels=12;unknowns=0;Target=comp106700_c0_seq1 213 1 .;CDS_Target=comp106700_c0_seq1 67 2 .;locus=RLOC_00007577
Chr1	stalkie_big_nohaplotig	exon	45557389	45557593	90	+	.	Parent=comp106700_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	45557390	45557457	.	+	0	Parent=comp106700_c0_seq1.mrna2
Chr1	gffcl	locus	45605014	45613965	.	+	.	ID=RLOC_00007578;geneIDs=FBgn0036760.1.path1,comp371111_c0_seq1.path1;transcripts=FBgn0036760.1.mrna1,comp371111_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45605014	45613965	.	+	.	ID=FBgn0036760.1.mrna1;geneID=FBgn0036760.1.path1;Name=FBgn0036760.1;Dir=sensecoverage=100.0;identity=99.7;matches=1217;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007578
Chr1	stalkie_big_nohaplotig	exon	45605014	45605267	99	+	.	Parent=FBgn0036760.1.mrna1;Target=FBgn0036760.1 1 254 +
Chr1	stalkie_big_nohaplotig	exon	45605480	45605622	98	+	.	Parent=FBgn0036760.1.mrna1;Target=FBgn0036760.1 255 397 +
Chr1	stalkie_big_nohaplotig	exon	45613074	45613722	100	+	.	Parent=FBgn0036760.1.mrna1;Target=FBgn0036760.1 398 1046 +
Chr1	stalkie_big_nohaplotig	exon	45613791	45613965	100	+	.	Parent=FBgn0036760.1.mrna1;Target=FBgn0036760.1 1047 1221 +
Chr1	stalkie_big_nohaplotig	CDS	45605014	45605267	.	+	0	Parent=FBgn0036760.1.mrna1;Target=FBgn0036760.1 1 254 +
Chr1	stalkie_big_nohaplotig	CDS	45605480	45605622	.	+	1	Parent=FBgn0036760.1.mrna1;Target=FBgn0036760.1 255 397 +
Chr1	stalkie_big_nohaplotig	CDS	45613074	45613722	.	+	2	Parent=FBgn0036760.1.mrna1;Target=FBgn0036760.1 398 1046 +
Chr1	stalkie_big_nohaplotig	CDS	45613791	45613965	.	+	1	Parent=FBgn0036760.1.mrna1;Target=FBgn0036760.1 1047 1221 +
Chr1	stalkie_big_nohaplotig	mRNA	45605244	45605501	.	+	.	ID=comp371111_c0_seq1.mrna1;geneID=comp371111_c0_seq1.path1;Name=comp371111_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.6;matches=257;mismatches=1;indels=0;unknowns=0;Target=comp371111_c0_seq1 258 1 .;CDS_Target=comp371111_c0_seq1 154 83 .;locus=RLOC_00007578
Chr1	stalkie_big_nohaplotig	exon	45605244	45605501	99	+	.	Parent=comp371111_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	45605326	45605397	.	+	0	Parent=comp371111_c0_seq1.mrna1
Chr1	gffcl	locus	45616509	45617787	.	+	.	ID=RLOC_00007579;geneIDs=FBgn0036760.2.path1;transcripts=FBgn0036760.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45616509	45617787	.	+	.	ID=FBgn0036760.2.mrna1;geneID=FBgn0036760.2.path1;Name=FBgn0036760.2;Dir=sensecoverage=100.0;identity=99.7;matches=951;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007579
Chr1	stalkie_big_nohaplotig	exon	45616509	45616632	100	+	.	Parent=FBgn0036760.2.mrna1;Target=FBgn0036760.2 1 124 +
Chr1	stalkie_big_nohaplotig	exon	45616841	45617498	99	+	.	Parent=FBgn0036760.2.mrna1;Target=FBgn0036760.2 125 782 +
Chr1	stalkie_big_nohaplotig	exon	45617616	45617787	100	+	.	Parent=FBgn0036760.2.mrna1;Target=FBgn0036760.2 783 954 +
Chr1	stalkie_big_nohaplotig	CDS	45616509	45616632	.	+	0	Parent=FBgn0036760.2.mrna1;Target=FBgn0036760.2 1 124 +
Chr1	stalkie_big_nohaplotig	CDS	45616841	45617498	.	+	2	Parent=FBgn0036760.2.mrna1;Target=FBgn0036760.2 125 782 +
Chr1	stalkie_big_nohaplotig	CDS	45617616	45617787	.	+	1	Parent=FBgn0036760.2.mrna1;Target=FBgn0036760.2 783 954 +
Chr1	gffcl	locus	45661464	45661754	.	+	.	ID=RLOC_00007580;geneIDs=comp74840_c0_seq1.path1;transcripts=comp74840_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45661464	45661754	.	+	.	ID=comp74840_c0_seq1.mrna1;geneID=comp74840_c0_seq1.path1;Name=comp74840_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=290;mismatches=1;indels=0;unknowns=0;Target=comp74840_c0_seq1 291 1 .;CDS_Target=comp74840_c0_seq1 54 1 .;locus=RLOC_00007580
Chr1	stalkie_big_nohaplotig	exon	45661464	45661754	99	+	.	Parent=comp74840_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	45661464	45661517	.	+	0	Parent=comp74840_c0_seq1.mrna1
Chr1	gffcl	locus	45774580	45775143	.	-	.	ID=RLOC_00007581;geneIDs=comp150813_c0_seq1.path1;transcripts=comp150813_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45774580	45775143	.	-	.	ID=comp150813_c0_seq1.mrna1;geneID=comp150813_c0_seq1.path1;Name=comp150813_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=560;mismatches=4;indels=0;unknowns=0;Target=comp150813_c0_seq1 564 1 .;CDS_Target=comp150813_c0_seq1 558 67 .;locus=RLOC_00007581
Chr1	stalkie_big_nohaplotig	exon	45774580	45775143	99	-	.	Parent=comp150813_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	45774586	45775077	.	-	0	Parent=comp150813_c0_seq1.mrna1
Chr1	gffcl	locus	45846593	45848362	.	-	.	ID=RLOC_00007582;geneIDs=FBgn0087007.path1;transcripts=FBgn0087007.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45846593	45848362	.	-	.	ID=FBgn0087007.mrna1;geneID=FBgn0087007.path1;Name=FBgn0087007;Dir=sensecoverage=99.8;identity=99.4;matches=1702;mismatches=11;indels=0;unknowns=0;locus=RLOC_00007582
Chr1	stalkie_big_nohaplotig	exon	45846593	45848016	99	-	.	Parent=FBgn0087007.mrna1;Target=FBgn0087007 290 1713 +
Chr1	stalkie_big_nohaplotig	exon	45848074	45848362	99	-	.	Parent=FBgn0087007.mrna1;Target=FBgn0087007 1 289 +
Chr1	stalkie_big_nohaplotig	CDS	45846593	45848016	.	-	2	Parent=FBgn0087007.mrna1;Target=FBgn0087007 290 1713 +
Chr1	stalkie_big_nohaplotig	CDS	45848074	45848362	.	-	0	Parent=FBgn0087007.mrna1;Target=FBgn0087007 1 289 +
Chr1	gffcl	locus	45888912	45889290	.	-	.	ID=RLOC_00007583;geneIDs=comp139714_c2_seq1.path1;transcripts=comp139714_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45888912	45889290	.	-	.	ID=comp139714_c2_seq1.mrna1;geneID=comp139714_c2_seq1.path1;Name=comp139714_c2_seq1;Dir=indeterminatecoverage=99.5;identity=94.2;matches=357;mismatches=22;indels=0;unknowns=0;Target=comp139714_c2_seq1 379 1 .;CDS_Target=comp139714_c2_seq1 123 1 .;locus=RLOC_00007583
Chr1	stalkie_big_nohaplotig	exon	45888912	45889290	94	-	.	Parent=comp139714_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	45889168	45889290	.	-	0	Parent=comp139714_c2_seq1.mrna1
Chr1	gffcl	locus	45926699	45927622	.	+	.	ID=RLOC_00007584;geneIDs=FBgn0035309.2.path1;transcripts=FBgn0035309.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45926699	45927622	.	+	.	ID=FBgn0035309.2.mrna1;geneID=FBgn0035309.2.path1;Name=FBgn0035309.2;Dir=indeterminatecoverage=91.4;identity=98.5;matches=910;mismatches=14;indels=0;unknowns=0;Target=FBgn0035309.2 1011 88 .;locus=RLOC_00007584
Chr1	stalkie_big_nohaplotig	exon	45926699	45927622	98	+	.	Parent=FBgn0035309.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	45926699	45927622	.	+	0	Parent=FBgn0035309.2.mrna1
Chr1	gffcl	locus	45929544	45930902	.	+	.	ID=RLOC_00007585;geneIDs=FBgn0036460.2.path1;transcripts=FBgn0036460.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45929544	45930902	.	+	.	ID=FBgn0036460.2.mrna1;geneID=FBgn0036460.2.path1;Name=FBgn0036460.2;Dir=sensecoverage=100.0;identity=99.6;matches=1240;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007585
Chr1	stalkie_big_nohaplotig	exon	45929544	45930372	99	+	.	Parent=FBgn0036460.2.mrna1;Target=FBgn0036460.2 1 829 +
Chr1	stalkie_big_nohaplotig	exon	45930435	45930639	98	+	.	Parent=FBgn0036460.2.mrna1;Target=FBgn0036460.2 830 1034 +
Chr1	stalkie_big_nohaplotig	exon	45930692	45930902	99	+	.	Parent=FBgn0036460.2.mrna1;Target=FBgn0036460.2 1035 1245 +
Chr1	stalkie_big_nohaplotig	CDS	45929544	45930372	.	+	0	Parent=FBgn0036460.2.mrna1;Target=FBgn0036460.2 1 829 +
Chr1	stalkie_big_nohaplotig	CDS	45930435	45930639	.	+	2	Parent=FBgn0036460.2.mrna1;Target=FBgn0036460.2 830 1034 +
Chr1	stalkie_big_nohaplotig	CDS	45930692	45930902	.	+	1	Parent=FBgn0036460.2.mrna1;Target=FBgn0036460.2 1035 1245 +
Chr1	gffcl	locus	45975740	45976411	.	+	.	ID=RLOC_00007587;geneIDs=comp146066_c0_seq1.path1;transcripts=comp146066_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45975740	45976411	.	+	.	ID=comp146066_c0_seq1.mrna1;geneID=comp146066_c0_seq1.path1;Name=comp146066_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=666;mismatches=6;indels=2;unknowns=0;Target=comp146066_c0_seq1 674 1 .;CDS_Target=comp146066_c0_seq1 345 211 .;locus=RLOC_00007587
Chr1	stalkie_big_nohaplotig	exon	45975740	45976411	98	+	.	Parent=comp146066_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	45975948	45976082	.	+	0	Parent=comp146066_c0_seq1.mrna1
Chr1	gffcl	locus	45976813	45990312	.	+	.	ID=RLOC_00007588;geneIDs=FBgn0002778.1.path1;transcripts=FBgn0002778.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	45976813	45990312	.	+	.	ID=FBgn0002778.1.mrna1;geneID=FBgn0002778.1.path1;Name=FBgn0002778.1;Dir=sensecoverage=100.0;identity=99.5;matches=1532;mismatches=7;indels=0;unknowns=0;locus=RLOC_00007588
Chr1	stalkie_big_nohaplotig	exon	45976813	45977152	99	+	.	Parent=FBgn0002778.1.mrna1;Target=FBgn0002778.1 1 340 +
Chr1	stalkie_big_nohaplotig	exon	45988990	45989208	99	+	.	Parent=FBgn0002778.1.mrna1;Target=FBgn0002778.1 341 559 +
Chr1	stalkie_big_nohaplotig	exon	45989269	45989864	99	+	.	Parent=FBgn0002778.1.mrna1;Target=FBgn0002778.1 560 1155 +
Chr1	stalkie_big_nohaplotig	exon	45989929	45990312	99	+	.	Parent=FBgn0002778.1.mrna1;Target=FBgn0002778.1 1156 1539 +
Chr1	stalkie_big_nohaplotig	CDS	45976813	45977152	.	+	0	Parent=FBgn0002778.1.mrna1;Target=FBgn0002778.1 1 340 +
Chr1	stalkie_big_nohaplotig	CDS	45988990	45989208	.	+	2	Parent=FBgn0002778.1.mrna1;Target=FBgn0002778.1 341 559 +
Chr1	stalkie_big_nohaplotig	CDS	45989269	45989864	.	+	2	Parent=FBgn0002778.1.mrna1;Target=FBgn0002778.1 560 1155 +
Chr1	stalkie_big_nohaplotig	CDS	45989929	45990312	.	+	0	Parent=FBgn0002778.1.mrna1;Target=FBgn0002778.1 1156 1539 +
Chr1	gffcl	locus	46064885	46067353	.	+	.	ID=RLOC_00007590;geneIDs=FBgn0262475.2.path1;transcripts=FBgn0262475.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46064885	46067353	.	+	.	ID=FBgn0262475.2.mrna1;geneID=FBgn0262475.2.path1;Name=FBgn0262475.2;Dir=sensecoverage=100.0;identity=98.2;matches=1199;mismatches=7;indels=15;unknowns=0;locus=RLOC_00007590
Chr1	stalkie_big_nohaplotig	exon	46064885	46065689	97	+	.	Parent=FBgn0262475.2.mrna1;Target=FBgn0262475.2 1 820 +
Chr1	stalkie_big_nohaplotig	exon	46066630	46066773	100	+	.	Parent=FBgn0262475.2.mrna1;Target=FBgn0262475.2 821 964 +
Chr1	stalkie_big_nohaplotig	exon	46067097	46067353	100	+	.	Parent=FBgn0262475.2.mrna1;Target=FBgn0262475.2 965 1221 +
Chr1	stalkie_big_nohaplotig	CDS	46064885	46065689	.	+	0	Parent=FBgn0262475.2.mrna1;Target=FBgn0262475.2 1 820 +
Chr1	stalkie_big_nohaplotig	CDS	46066630	46066773	.	+	2	Parent=FBgn0262475.2.mrna1;Target=FBgn0262475.2 821 964 +
Chr1	stalkie_big_nohaplotig	CDS	46067097	46067353	.	+	2	Parent=FBgn0262475.2.mrna1;Target=FBgn0262475.2 965 1221 +
Chr1	gffcl	locus	46073469	46074774	.	-	.	ID=RLOC_00007591;geneIDs=FBgn0036462.1.path1;transcripts=FBgn0036462.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46073469	46074774	.	-	.	ID=FBgn0036462.1.mrna1;geneID=FBgn0036462.1.path1;Name=FBgn0036462.1;Dir=sensecoverage=100.0;identity=99.9;matches=1004;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007591
Chr1	stalkie_big_nohaplotig	exon	46073469	46073522	100	-	.	Parent=FBgn0036462.1.mrna1;Target=FBgn0036462.1 952 1005 +
Chr1	stalkie_big_nohaplotig	exon	46073593	46074035	99	-	.	Parent=FBgn0036462.1.mrna1;Target=FBgn0036462.1 509 951 +
Chr1	stalkie_big_nohaplotig	exon	46074092	46074192	100	-	.	Parent=FBgn0036462.1.mrna1;Target=FBgn0036462.1 408 508 +
Chr1	stalkie_big_nohaplotig	exon	46074261	46074588	100	-	.	Parent=FBgn0036462.1.mrna1;Target=FBgn0036462.1 80 407 +
Chr1	stalkie_big_nohaplotig	exon	46074696	46074774	100	-	.	Parent=FBgn0036462.1.mrna1;Target=FBgn0036462.1 1 79 +
Chr1	stalkie_big_nohaplotig	CDS	46073469	46073522	.	-	0	Parent=FBgn0036462.1.mrna1;Target=FBgn0036462.1 952 1005 +
Chr1	stalkie_big_nohaplotig	CDS	46073593	46074035	.	-	2	Parent=FBgn0036462.1.mrna1;Target=FBgn0036462.1 509 951 +
Chr1	stalkie_big_nohaplotig	CDS	46074092	46074192	.	-	1	Parent=FBgn0036462.1.mrna1;Target=FBgn0036462.1 408 508 +
Chr1	stalkie_big_nohaplotig	CDS	46074261	46074588	.	-	2	Parent=FBgn0036462.1.mrna1;Target=FBgn0036462.1 80 407 +
Chr1	stalkie_big_nohaplotig	CDS	46074696	46074774	.	-	0	Parent=FBgn0036462.1.mrna1;Target=FBgn0036462.1 1 79 +
Chr1	gffcl	locus	46076896	46077937	.	+	.	ID=RLOC_00007592;geneIDs=FBgn0023174.1.path1;transcripts=FBgn0023174.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46076896	46077937	.	+	.	ID=FBgn0023174.1.mrna1;geneID=FBgn0023174.1.path1;Name=FBgn0023174.1;Dir=sensecoverage=100.0;identity=100.0;matches=804;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007592
Chr1	stalkie_big_nohaplotig	exon	46076896	46076951	100	+	.	Parent=FBgn0023174.1.mrna1;Target=FBgn0023174.1 1 56 +
Chr1	stalkie_big_nohaplotig	exon	46077066	46077245	100	+	.	Parent=FBgn0023174.1.mrna1;Target=FBgn0023174.1 57 236 +
Chr1	stalkie_big_nohaplotig	exon	46077309	46077780	100	+	.	Parent=FBgn0023174.1.mrna1;Target=FBgn0023174.1 237 708 +
Chr1	stalkie_big_nohaplotig	exon	46077842	46077937	100	+	.	Parent=FBgn0023174.1.mrna1;Target=FBgn0023174.1 709 804 +
Chr1	stalkie_big_nohaplotig	CDS	46076896	46076951	.	+	0	Parent=FBgn0023174.1.mrna1;Target=FBgn0023174.1 1 56 +
Chr1	stalkie_big_nohaplotig	CDS	46077066	46077245	.	+	1	Parent=FBgn0023174.1.mrna1;Target=FBgn0023174.1 57 236 +
Chr1	stalkie_big_nohaplotig	CDS	46077309	46077780	.	+	1	Parent=FBgn0023174.1.mrna1;Target=FBgn0023174.1 237 708 +
Chr1	stalkie_big_nohaplotig	CDS	46077842	46077937	.	+	0	Parent=FBgn0023174.1.mrna1;Target=FBgn0023174.1 709 804 +
Chr1	gffcl	locus	46079365	46081674	.	-	.	ID=RLOC_00007593;geneIDs=FBgn0250848.1.path1;transcripts=FBgn0250848.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46079365	46081674	.	-	.	ID=FBgn0250848.1.mrna1;geneID=FBgn0250848.1.path1;Name=FBgn0250848.1;Dir=sensecoverage=99.9;identity=99.3;matches=1655;mismatches=12;indels=0;unknowns=0;locus=RLOC_00007593
Chr1	stalkie_big_nohaplotig	exon	46079365	46079972	99	-	.	Parent=FBgn0250848.1.mrna1;Target=FBgn0250848.1 1061 1668 +
Chr1	stalkie_big_nohaplotig	exon	46080033	46080446	99	-	.	Parent=FBgn0250848.1.mrna1;Target=FBgn0250848.1 647 1060 +
Chr1	stalkie_big_nohaplotig	exon	46080510	46081088	98	-	.	Parent=FBgn0250848.1.mrna1;Target=FBgn0250848.1 68 646 +
Chr1	stalkie_big_nohaplotig	exon	46081609	46081674	100	-	.	Parent=FBgn0250848.1.mrna1;Target=FBgn0250848.1 2 67 +
Chr1	stalkie_big_nohaplotig	CDS	46079365	46079972	.	-	2	Parent=FBgn0250848.1.mrna1;Target=FBgn0250848.1 1061 1668 +
Chr1	stalkie_big_nohaplotig	CDS	46080033	46080446	.	-	2	Parent=FBgn0250848.1.mrna1;Target=FBgn0250848.1 647 1060 +
Chr1	stalkie_big_nohaplotig	CDS	46080510	46081088	.	-	2	Parent=FBgn0250848.1.mrna1;Target=FBgn0250848.1 68 646 +
Chr1	stalkie_big_nohaplotig	CDS	46081609	46081672	.	-	0	Parent=FBgn0250848.1.mrna1;Target=FBgn0250848.1 4 67 +
Chr1	gffcl	locus	46090675	46100006	.	-	.	ID=RLOC_00007594;geneIDs=FBgn0036463.path1,comp161756_c0_seq1.path1;transcripts=FBgn0036463.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46090675	46100006	.	-	.	ID=FBgn0036463.mrna1;geneID=FBgn0036463.path1;Name=FBgn0036463;Dir=sensecoverage=99.9;identity=99.6;matches=1643;mismatches=6;indels=0;unknowns=0;locus=RLOC_00007594
Chr1	stalkie_big_nohaplotig	exon	46090675	46091164	99	-	.	Parent=FBgn0036463.mrna1;Target=FBgn0036463 1160 1649 +
Chr1	stalkie_big_nohaplotig	exon	46098746	46099012	100	-	.	Parent=FBgn0036463.mrna1;Target=FBgn0036463 893 1159 +
Chr1	stalkie_big_nohaplotig	exon	46099115	46100006	99	-	.	Parent=FBgn0036463.mrna1;Target=FBgn0036463 1 892 +
Chr1	stalkie_big_nohaplotig	CDS	46090677	46091164	.	-	2	Parent=FBgn0036463.mrna1;Target=FBgn0036463 1160 1647 +
Chr1	stalkie_big_nohaplotig	CDS	46098746	46099012	.	-	2	Parent=FBgn0036463.mrna1;Target=FBgn0036463 893 1159 +
Chr1	stalkie_big_nohaplotig	CDS	46099115	46100006	.	-	0	Parent=FBgn0036463.mrna1;Target=FBgn0036463 1 892 +
Chr1	gffcl	locus	46159998	46160207	.	+	.	ID=RLOC_00007595;geneIDs=comp143006_c0_seq1.path1;transcripts=comp143006_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46159998	46160207	.	+	.	ID=comp143006_c0_seq1.mrna1;geneID=comp143006_c0_seq1.path1;Name=comp143006_c0_seq1;Dir=indeterminatecoverage=71.3;identity=99.0;matches=208;mismatches=1;indels=1;unknowns=0;Target=comp143006_c0_seq1 209 1 .;CDS_Target=comp143006_c0_seq1 112 2 .;locus=RLOC_00007595
Chr1	stalkie_big_nohaplotig	exon	46159998	46160207	99	+	.	Parent=comp143006_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46159999	46160109	.	+	0	Parent=comp143006_c0_seq1.mrna1
Chr1	gffcl	locus	46160289	46160372	.	-	.	ID=RLOC_00007596;geneIDs=comp143006_c0_seq1.path2;transcripts=comp143006_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	46160289	46160372	.	-	.	ID=comp143006_c0_seq1.mrna2;geneID=comp143006_c0_seq1.path2;Name=comp143006_c0_seq1;Dir=indeterminatecoverage=28.7;identity=100.0;matches=84;mismatches=0;indels=0;unknowns=0;Target=comp143006_c0_seq1 293 210 .;locus=RLOC_00007596
Chr1	stalkie_big_nohaplotig	exon	46160289	46160372	100	-	.	Parent=comp143006_c0_seq1.mrna2
Chr1	gffcl	locus	46274311	46275327	.	+	.	ID=RLOC_00007597;geneIDs=ORF1709.path1;transcripts=ORF1709.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46274311	46275327	.	+	.	ID=ORF1709.mrna1;geneID=ORF1709.path1;Name=ORF1709;Dir=indeterminatecoverage=100.0;identity=98.6;matches=1003;mismatches=14;indels=0;unknowns=0;Target=ORF1709 1017 1 .;locus=RLOC_00007597
Chr1	stalkie_big_nohaplotig	exon	46274311	46275327	98	+	.	Parent=ORF1709.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46274311	46275327	.	+	0	Parent=ORF1709.mrna1
Chr1	gffcl	locus	46327802	46328292	.	-	.	ID=RLOC_00007598;geneIDs=comp135546_c0_seq1.path1;transcripts=comp135546_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46327802	46328292	.	-	.	ID=comp135546_c0_seq1.mrna1;geneID=comp135546_c0_seq1.path1;Name=comp135546_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.6;matches=489;mismatches=2;indels=0;unknowns=0;Target=comp135546_c0_seq1 491 1 .;CDS_Target=comp135546_c0_seq1 320 48 .;locus=RLOC_00007598
Chr1	stalkie_big_nohaplotig	exon	46327802	46328292	99	-	.	Parent=comp135546_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46327973	46328245	.	-	0	Parent=comp135546_c0_seq1.mrna1
Chr1	gffcl	locus	46366617	46418385	.	-	.	ID=RLOC_00007599;geneIDs=FBgn0086690.1.path1;transcripts=FBgn0086690.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46366617	46418385	.	-	.	ID=FBgn0086690.1.mrna1;geneID=FBgn0086690.1.path1;Name=FBgn0086690.1;Dir=sensecoverage=99.8;identity=99.0;matches=9823;mismatches=82;indels=21;unknowns=0;locus=RLOC_00007599
Chr1	stalkie_big_nohaplotig	exon	46366617	46366851	95	-	.	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 9711 9936 +
Chr1	stalkie_big_nohaplotig	exon	46369795	46369905	99	-	.	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 9600 9710 +
Chr1	stalkie_big_nohaplotig	exon	46369970	46372359	99	-	.	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 7210 9599 +
Chr1	stalkie_big_nohaplotig	exon	46372426	46373136	98	-	.	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 6499 7209 +
Chr1	stalkie_big_nohaplotig	exon	46381074	46381397	100	-	.	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 6175 6498 +
Chr1	stalkie_big_nohaplotig	exon	46382636	46382818	99	-	.	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 5992 6174 +
Chr1	stalkie_big_nohaplotig	exon	46384167	46384361	100	-	.	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 5797 5991 +
Chr1	stalkie_big_nohaplotig	exon	46385878	46386045	99	-	.	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 5629 5796 +
Chr1	stalkie_big_nohaplotig	exon	46388504	46389667	99	-	.	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 4465 5628 +
Chr1	stalkie_big_nohaplotig	exon	46389736	46389861	100	-	.	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 4339 4464 +
Chr1	stalkie_big_nohaplotig	exon	46411134	46411373	100	-	.	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 4099 4338 +
Chr1	stalkie_big_nohaplotig	exon	46414112	46414252	100	-	.	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 3958 4098 +
Chr1	stalkie_big_nohaplotig	exon	46414320	46414560	100	-	.	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 3717 3957 +
Chr1	stalkie_big_nohaplotig	exon	46414633	46415336	99	-	.	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 3013 3716 +
Chr1	stalkie_big_nohaplotig	exon	46415402	46418385	98	-	.	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 23 3012 +
Chr1	stalkie_big_nohaplotig	CDS	46366617	46366851	.	-	1	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 9711 9936 +
Chr1	stalkie_big_nohaplotig	CDS	46369795	46369905	.	-	1	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 9600 9710 +
Chr1	stalkie_big_nohaplotig	CDS	46369970	46372359	.	-	0	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 7210 9599 +
Chr1	stalkie_big_nohaplotig	CDS	46372426	46373136	.	-	0	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 6499 7209 +
Chr1	stalkie_big_nohaplotig	CDS	46381074	46381397	.	-	0	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 6175 6498 +
Chr1	stalkie_big_nohaplotig	CDS	46382636	46382818	.	-	0	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 5992 6174 +
Chr1	stalkie_big_nohaplotig	CDS	46384167	46384361	.	-	0	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 5797 5991 +
Chr1	stalkie_big_nohaplotig	CDS	46385878	46386045	.	-	0	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 5629 5796 +
Chr1	stalkie_big_nohaplotig	CDS	46388504	46389667	.	-	0	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 4465 5628 +
Chr1	stalkie_big_nohaplotig	CDS	46389736	46389861	.	-	0	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 4339 4464 +
Chr1	stalkie_big_nohaplotig	CDS	46411134	46411373	.	-	0	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 4099 4338 +
Chr1	stalkie_big_nohaplotig	CDS	46414112	46414252	.	-	0	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 3958 4098 +
Chr1	stalkie_big_nohaplotig	CDS	46414320	46414560	.	-	1	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 3717 3957 +
Chr1	stalkie_big_nohaplotig	CDS	46414633	46415336	.	-	0	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 3013 3716 +
Chr1	stalkie_big_nohaplotig	CDS	46415402	46418383	.	-	0	Parent=FBgn0086690.1.mrna1;Target=FBgn0086690.1 25 3012 +
Chr1	gffcl	locus	46368933	46369231	.	+	.	ID=RLOC_00007600;geneIDs=comp131802_c0_seq1.path1;transcripts=comp131802_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46368933	46369231	.	+	.	ID=comp131802_c0_seq1.mrna1;geneID=comp131802_c0_seq1.path1;Name=comp131802_c0_seq1;Dir=indeterminatecoverage=100.0;identity=87.2;matches=279;mismatches=20;indels=21;unknowns=0;Target=comp131802_c0_seq1 320 1 .;CDS_Target=comp131802_c0_seq1 79 2 .;locus=RLOC_00007600
Chr1	stalkie_big_nohaplotig	exon	46368933	46369231	87	+	.	Parent=comp131802_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46368934	46369011	.	+	0	Parent=comp131802_c0_seq1.mrna1
Chr1	gffcl	locus	46392111	46392729	.	-	.	ID=RLOC_00007601;geneIDs=comp149862_c0_seq1.path1;transcripts=comp149862_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46392111	46392729	.	-	.	ID=comp149862_c0_seq1.mrna1;geneID=comp149862_c0_seq1.path1;Name=comp149862_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.8;matches=587;mismatches=32;indels=0;unknowns=0;Target=comp149862_c0_seq1 619 1 .;CDS_Target=comp149862_c0_seq1 58 2 .;locus=RLOC_00007601
Chr1	stalkie_big_nohaplotig	exon	46392111	46392729	94	-	.	Parent=comp149862_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46392672	46392728	.	-	0	Parent=comp149862_c0_seq1.mrna1
Chr1	gffcl	locus	46393283	46394154	.	+	.	ID=RLOC_00007602;geneIDs=comp155283_c0_seq1.path1;transcripts=comp155283_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46393283	46394154	.	+	.	ID=comp155283_c0_seq1.mrna1;geneID=comp155283_c0_seq1.path1;Name=comp155283_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.1;matches=848;mismatches=24;indels=10;unknowns=0;Target=comp155283_c0_seq1 883 2 .;CDS_Target=comp155283_c0_seq1 522 340 .;locus=RLOC_00007602
Chr1	stalkie_big_nohaplotig	exon	46393283	46394154	96	+	.	Parent=comp155283_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46393611	46393793	.	+	0	Parent=comp155283_c0_seq1.mrna1
Chr1	gffcl	locus	46396426	46397339	.	+	.	ID=RLOC_00007603;geneIDs=comp149425_c0_seq1.path1;transcripts=comp149425_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46396426	46397339	.	+	.	ID=comp149425_c0_seq1.mrna1;geneID=comp149425_c0_seq1.path1;Name=comp149425_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=894;mismatches=20;indels=6;unknowns=0;Target=comp149425_c0_seq1 920 1 .;CDS_Target=comp149425_c0_seq1 107 3 .;locus=RLOC_00007603
Chr1	stalkie_big_nohaplotig	exon	46396426	46397339	97	+	.	Parent=comp149425_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46396428	46396532	.	+	0	Parent=comp149425_c0_seq1.mrna1
Chr1	gffcl	locus	46441636	46443753	.	-	.	ID=RLOC_00007604;geneIDs=FBgn0036476.1.path1;transcripts=FBgn0036476.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46441636	46443753	.	-	.	ID=FBgn0036476.1.mrna1;geneID=FBgn0036476.1.path1;Name=FBgn0036476.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=2106;mismatches=12;indels=3;unknowns=0;Target=FBgn0036476.1 2121 1 .;locus=RLOC_00007604
Chr1	stalkie_big_nohaplotig	exon	46441636	46443753	99	-	.	Parent=FBgn0036476.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46441636	46443753	.	-	0	Parent=FBgn0036476.1.mrna1
Chr1	gffcl	locus	46449698	46452009	.	+	.	ID=RLOC_00007605;geneIDs=FBgn0027088.1.path1;transcripts=FBgn0027088.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46449698	46452009	.	+	.	ID=FBgn0027088.1.mrna1;geneID=FBgn0027088.1.path1;Name=FBgn0027088.1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=2291;mismatches=21;indels=0;unknowns=0;Target=FBgn0027088.1 2313 2 .;CDS_Target=FBgn0027088.1 2313 4 .;locus=RLOC_00007605
Chr1	stalkie_big_nohaplotig	exon	46449698	46452009	99	+	.	Parent=FBgn0027088.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46449700	46452009	.	+	0	Parent=FBgn0027088.1.mrna1
Chr1	gffcl	locus	46455628	46481039	.	+	.	ID=RLOC_00007606;geneIDs=FBgn0262707.2.path1;transcripts=FBgn0262707.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46455628	46481039	.	+	.	ID=FBgn0262707.2.mrna1;geneID=FBgn0262707.2.path1;Name=FBgn0262707.2;Dir=sensecoverage=99.7;identity=99.3;matches=1949;mismatches=13;indels=0;unknowns=0;locus=RLOC_00007606
Chr1	stalkie_big_nohaplotig	exon	46455628	46455802	99	+	.	Parent=FBgn0262707.2.mrna1;Target=FBgn0262707.2 7 181 +
Chr1	stalkie_big_nohaplotig	exon	46479122	46479292	99	+	.	Parent=FBgn0262707.2.mrna1;Target=FBgn0262707.2 182 352 +
Chr1	stalkie_big_nohaplotig	exon	46479362	46479863	99	+	.	Parent=FBgn0262707.2.mrna1;Target=FBgn0262707.2 353 854 +
Chr1	stalkie_big_nohaplotig	exon	46479926	46481039	99	+	.	Parent=FBgn0262707.2.mrna1;Target=FBgn0262707.2 855 1968 +
Chr1	stalkie_big_nohaplotig	CDS	46455628	46455802	.	+	0	Parent=FBgn0262707.2.mrna1;Target=FBgn0262707.2 7 181 +
Chr1	stalkie_big_nohaplotig	CDS	46479122	46479292	.	+	2	Parent=FBgn0262707.2.mrna1;Target=FBgn0262707.2 182 352 +
Chr1	stalkie_big_nohaplotig	CDS	46479362	46479863	.	+	2	Parent=FBgn0262707.2.mrna1;Target=FBgn0262707.2 353 854 +
Chr1	stalkie_big_nohaplotig	CDS	46479926	46481039	.	+	1	Parent=FBgn0262707.2.mrna1;Target=FBgn0262707.2 855 1968 +
Chr1	gffcl	locus	46456183	46457282	.	-	.	ID=RLOC_00007607;geneIDs=comp154978_c0_seq1.path1;transcripts=comp154978_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46456183	46457282	.	-	.	ID=comp154978_c0_seq1.mrna1;geneID=comp154978_c0_seq1.path1;Name=comp154978_c0_seq1;Dir=indeterminatecoverage=93.4;identity=85.1;matches=971;mismatches=122;indels=48;unknowns=0;Target=comp154978_c0_seq1 1214 81 .;CDS_Target=comp154978_c0_seq1 220 83 .;locus=RLOC_00007607
Chr1	stalkie_big_nohaplotig	exon	46456183	46457282	85	-	.	Parent=comp154978_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46457143	46457280	.	-	0	Parent=comp154978_c0_seq1.mrna1
Chr1	gffcl	locus	46460947	46461407	.	+	.	ID=RLOC_00007608;geneIDs=comp157345_c0_seq1.path1;transcripts=comp157345_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46460947	46461407	.	+	.	ID=comp157345_c0_seq1.mrna1;geneID=comp157345_c0_seq1.path1;Name=comp157345_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=461;mismatches=0;indels=1;unknowns=0;Target=comp157345_c0_seq1 462 1 .;CDS_Target=comp157345_c0_seq1 417 346 .;locus=RLOC_00007608
Chr1	stalkie_big_nohaplotig	exon	46460947	46461407	99	+	.	Parent=comp157345_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46461292	46461362	.	+	0	Parent=comp157345_c0_seq1.mrna1
Chr1	gffcl	locus	46461474	46461940	.	+	.	ID=RLOC_00007609;geneIDs=comp117523_c0_seq1.path1;transcripts=comp117523_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46461474	46461940	.	+	.	ID=comp117523_c0_seq1.mrna1;geneID=comp117523_c0_seq1.path1;Name=comp117523_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.3;matches=429;mismatches=22;indels=19;unknowns=0;Target=comp117523_c0_seq1 454 1 .;CDS_Target=comp117523_c0_seq1 317 267 .;locus=RLOC_00007609
Chr1	stalkie_big_nohaplotig	exon	46461474	46461940	91	+	.	Parent=comp117523_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46461740	46461788	.	+	0	Parent=comp117523_c0_seq1.mrna1
Chr1	gffcl	locus	46462126	46463024	.	+	.	ID=RLOC_00007610;geneIDs=comp159324_c0_seq1.path1;transcripts=comp159324_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46462126	46463024	.	+	.	ID=comp159324_c0_seq1.mrna1;geneID=comp159324_c0_seq1.path1;Name=comp159324_c0_seq1;Dir=indeterminatecoverage=98.3;identity=91.8;matches=864;mismatches=26;indels=51;unknowns=0;Target=comp159324_c0_seq1 932 1 .;CDS_Target=comp159324_c0_seq1 345 178 .;locus=RLOC_00007610
Chr1	stalkie_big_nohaplotig	exon	46462126	46463024	91	+	.	Parent=comp159324_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46462303	46462465	.	+	0	Parent=comp159324_c0_seq1.mrna1
Chr1	gffcl	locus	46463036	46463973	.	-	.	ID=RLOC_00007611;geneIDs=comp153875_c0_seq1.path1;transcripts=comp153875_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46463036	46463973	.	-	.	ID=comp153875_c0_seq1.mrna1;geneID=comp153875_c0_seq1.path1;Name=comp153875_c0_seq1;Dir=indeterminatecoverage=99.0;identity=96.5;matches=907;mismatches=26;indels=7;unknowns=0;Target=comp153875_c0_seq1 935 1 .;CDS_Target=comp153875_c0_seq1 688 500 .;locus=RLOC_00007611
Chr1	stalkie_big_nohaplotig	exon	46463036	46463973	96	-	.	Parent=comp153875_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46463288	46463475	.	-	0	Parent=comp153875_c0_seq1.mrna1
Chr1	gffcl	locus	46465478	46468679	.	+	.	ID=RLOC_00007612;geneIDs=comp115948_c0_seq1.path1,comp162422_c0_seq1.path1;transcripts=comp162422_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46465478	46468178	.	+	.	ID=comp162422_c0_seq1.mrna1;geneID=comp162422_c0_seq1.path1;Name=comp162422_c0_seq1;Dir=indeterminatecoverage=99.0;identity=97.3;matches=2650;mismatches=37;indels=36;unknowns=0;Target=comp162422_c0_seq1 2735 27 .;CDS_Target=comp162422_c0_seq1 2735 2376 .;locus=RLOC_00007612
Chr1	stalkie_big_nohaplotig	exon	46465478	46468178	97	+	.	Parent=comp162422_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46467819	46468178	.	+	0	Parent=comp162422_c0_seq1.mrna1
Chr1	gffcl	locus	46468780	46469535	.	-	.	ID=RLOC_00007613;geneIDs=comp151786_c0_seq1.path1;transcripts=comp151786_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46468780	46469535	.	-	.	ID=comp151786_c0_seq1.mrna1;geneID=comp151786_c0_seq1.path1;Name=comp151786_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.3;matches=700;mismatches=48;indels=10;unknowns=0;Target=comp151786_c0_seq1 750 1 .;CDS_Target=comp151786_c0_seq1 524 396 .;locus=RLOC_00007613
Chr1	stalkie_big_nohaplotig	exon	46468780	46469535	92	-	.	Parent=comp151786_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46469006	46469134	.	-	0	Parent=comp151786_c0_seq1.mrna1
Chr1	gffcl	locus	46474099	46477266	.	+	.	ID=RLOC_00007614;geneIDs=FBgn0262707.1.path1;transcripts=FBgn0262707.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46474099	46477266	.	+	.	ID=FBgn0262707.1.mrna1;geneID=FBgn0262707.1.path1;Name=FBgn0262707.1;Dir=sensecoverage=100.0;identity=99.3;matches=1201;mismatches=8;indels=0;unknowns=0;locus=RLOC_00007614
Chr1	stalkie_big_nohaplotig	exon	46474099	46474294	100	+	.	Parent=FBgn0262707.1.mrna1;Target=FBgn0262707.1 1 196 +
Chr1	stalkie_big_nohaplotig	exon	46474357	46474506	98	+	.	Parent=FBgn0262707.1.mrna1;Target=FBgn0262707.1 197 346 +
Chr1	stalkie_big_nohaplotig	exon	46476404	46477266	99	+	.	Parent=FBgn0262707.1.mrna1;Target=FBgn0262707.1 347 1209 +
Chr1	stalkie_big_nohaplotig	CDS	46474099	46474294	.	+	0	Parent=FBgn0262707.1.mrna1;Target=FBgn0262707.1 1 196 +
Chr1	stalkie_big_nohaplotig	CDS	46474357	46474506	.	+	2	Parent=FBgn0262707.1.mrna1;Target=FBgn0262707.1 197 346 +
Chr1	stalkie_big_nohaplotig	CDS	46476404	46477266	.	+	2	Parent=FBgn0262707.1.mrna1;Target=FBgn0262707.1 347 1209 +
Chr1	gffcl	locus	46488353	46560266	.	-	.	ID=RLOC_00007615;geneIDs=FBgn0259236.1.path1,comp146806_c0_seq1.path1;transcripts=FBgn0259236.1.mrna1,comp146806_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46488353	46535907	.	-	.	ID=FBgn0259236.1.mrna1;geneID=FBgn0259236.1.path1;Name=FBgn0259236.1;Dir=sensecoverage=100.0;identity=99.5;matches=1057;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007615
Chr1	stalkie_big_nohaplotig	exon	46488353	46488993	99	-	.	Parent=FBgn0259236.1.mrna1;Target=FBgn0259236.1 422 1062 +
Chr1	stalkie_big_nohaplotig	exon	46535487	46535907	99	-	.	Parent=FBgn0259236.1.mrna1;Target=FBgn0259236.1 1 421 +
Chr1	stalkie_big_nohaplotig	CDS	46488353	46488993	.	-	2	Parent=FBgn0259236.1.mrna1;Target=FBgn0259236.1 422 1062 +
Chr1	stalkie_big_nohaplotig	CDS	46535487	46535907	.	-	0	Parent=FBgn0259236.1.mrna1;Target=FBgn0259236.1 1 421 +
Chr1	stalkie_big_nohaplotig	mRNA	46488944	46560266	.	-	.	ID=comp146806_c0_seq1.mrna1;geneID=comp146806_c0_seq1.path1;Name=comp146806_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=518;mismatches=6;indels=0;unknowns=0;locus=RLOC_00007615
Chr1	stalkie_big_nohaplotig	exon	46488944	46488993	96	-	.	Parent=comp146806_c0_seq1.mrna1;Target=comp146806_c0_seq1 524 475 .
Chr1	stalkie_big_nohaplotig	exon	46559793	46560266	99	-	.	Parent=comp146806_c0_seq1.mrna1;Target=comp146806_c0_seq1 474 1 .
Chr1	stalkie_big_nohaplotig	CDS	46488944	46488993	.	-	2	Parent=comp146806_c0_seq1.mrna1;Target=comp146806_c0_seq1 524 475 .
Chr1	stalkie_big_nohaplotig	CDS	46559793	46560087	.	-	0	Parent=comp146806_c0_seq1.mrna1;Target=comp146806_c0_seq1 474 180 .
Chr1	gffcl	locus	46498625	46514235	.	+	.	ID=RLOC_00007616;geneIDs=ORF759.path1,FBgn0036522.1.path1;transcripts=FBgn0036522.1.mrna1,ORF759.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46498625	46514235	.	+	.	ID=FBgn0036522.1.mrna1;geneID=FBgn0036522.1.path1;Name=FBgn0036522.1;Dir=sensecoverage=100.0;identity=98.4;matches=3627;mismatches=48;indels=12;unknowns=0;locus=RLOC_00007616
Chr1	stalkie_big_nohaplotig	exon	46498625	46499833	97	+	.	Parent=FBgn0036522.1.mrna1;Target=FBgn0036522.1 1 1209 +
Chr1	stalkie_big_nohaplotig	exon	46499892	46500083	98	+	.	Parent=FBgn0036522.1.mrna1;Target=FBgn0036522.1 1210 1401 +
Chr1	stalkie_big_nohaplotig	exon	46511886	46513698	98	+	.	Parent=FBgn0036522.1.mrna1;Target=FBgn0036522.1 1402 3226 +
Chr1	stalkie_big_nohaplotig	exon	46513775	46514235	98	+	.	Parent=FBgn0036522.1.mrna1;Target=FBgn0036522.1 3227 3687 +
Chr1	stalkie_big_nohaplotig	CDS	46498625	46499833	.	+	0	Parent=FBgn0036522.1.mrna1;Target=FBgn0036522.1 1 1209 +
Chr1	stalkie_big_nohaplotig	CDS	46499892	46500083	.	+	0	Parent=FBgn0036522.1.mrna1;Target=FBgn0036522.1 1210 1401 +
Chr1	stalkie_big_nohaplotig	CDS	46511886	46513698	.	+	0	Parent=FBgn0036522.1.mrna1;Target=FBgn0036522.1 1402 3226 +
Chr1	stalkie_big_nohaplotig	CDS	46513775	46514235	.	+	2	Parent=FBgn0036522.1.mrna1;Target=FBgn0036522.1 3227 3687 +
Chr1	stalkie_big_nohaplotig	mRNA	46510386	46511906	.	+	.	ID=ORF759.mrna1;geneID=ORF759.path1;Name=ORF759;Dir=sensecoverage=100.0;identity=99.4;matches=1446;mismatches=9;indels=0;unknowns=0;locus=RLOC_00007616
Chr1	stalkie_big_nohaplotig	exon	46510386	46511645	99	+	.	Parent=ORF759.mrna1;Target=ORF759 1 1260 +
Chr1	stalkie_big_nohaplotig	exon	46511712	46511906	100	+	.	Parent=ORF759.mrna1;Target=ORF759 1261 1455 +
Chr1	stalkie_big_nohaplotig	CDS	46510386	46511645	.	+	0	Parent=ORF759.mrna1;Target=ORF759 1 1260 +
Chr1	stalkie_big_nohaplotig	CDS	46511712	46511906	.	+	0	Parent=ORF759.mrna1;Target=ORF759 1261 1455 +
Chr1	gffcl	locus	46539104	46539455	.	+	.	ID=RLOC_00007617;geneIDs=comp145220_c0_seq1.path1;transcripts=comp145220_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46539104	46539455	.	+	.	ID=comp145220_c0_seq1.mrna1;geneID=comp145220_c0_seq1.path1;Name=comp145220_c0_seq1;Dir=indeterminatecoverage=96.2;identity=99.7;matches=351;mismatches=1;indels=0;unknowns=0;Target=comp145220_c0_seq1 352 1 .;CDS_Target=comp145220_c0_seq1 173 3 .;locus=RLOC_00007617
Chr1	stalkie_big_nohaplotig	exon	46539104	46539455	99	+	.	Parent=comp145220_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46539106	46539276	.	+	0	Parent=comp145220_c0_seq1.mrna1
Chr1	gffcl	locus	46541761	46542840	.	+	.	ID=RLOC_00007618;geneIDs=comp153367_c1_seq1.path1;transcripts=comp153367_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46541761	46542840	.	+	.	ID=comp153367_c1_seq1.mrna1;geneID=comp153367_c1_seq1.path1;Name=comp153367_c1_seq1;Dir=indeterminatecoverage=100.0;identity=91.8;matches=991;mismatches=40;indels=48;unknowns=0;Target=comp153367_c1_seq1 577 515 .;locus=RLOC_00007618
Chr1	stalkie_big_nohaplotig	exon	46541761	46542070	86	+	.	Parent=comp153367_c1_seq1.mrna1;Target=comp153367_c1_seq1 351 1 .
Chr1	stalkie_big_nohaplotig	exon	46542120	46542840	94	+	.	Parent=comp153367_c1_seq1.mrna1;Target=comp153367_c1_seq1 1079 352 .
Chr1	stalkie_big_nohaplotig	CDS	46542282	46542344	.	+	0	Parent=comp153367_c1_seq1.mrna1
Chr1	gffcl	locus	46567114	46567855	.	-	.	ID=RLOC_00007619;geneIDs=comp166028_c0_seq1.path1;transcripts=comp166028_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46567114	46567855	.	-	.	ID=comp166028_c0_seq1.mrna1;geneID=comp166028_c0_seq1.path1;Name=comp166028_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=562;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007619
Chr1	stalkie_big_nohaplotig	exon	46567114	46567332	100	-	.	Parent=comp166028_c0_seq1.mrna1;Target=comp166028_c0_seq1 1 219 -
Chr1	stalkie_big_nohaplotig	exon	46567411	46567620	100	-	.	Parent=comp166028_c0_seq1.mrna1;Target=comp166028_c0_seq1 220 429 -
Chr1	stalkie_big_nohaplotig	exon	46567723	46567855	100	-	.	Parent=comp166028_c0_seq1.mrna1;Target=comp166028_c0_seq1 430 562 -
Chr1	stalkie_big_nohaplotig	CDS	46567274	46567332	.	-	2	Parent=comp166028_c0_seq1.mrna1;Target=comp166028_c0_seq1 161 219 .
Chr1	stalkie_big_nohaplotig	CDS	46567411	46567620	.	-	2	Parent=comp166028_c0_seq1.mrna1;Target=comp166028_c0_seq1 220 429 .
Chr1	stalkie_big_nohaplotig	CDS	46567723	46567855	.	-	0	Parent=comp166028_c0_seq1.mrna1;Target=comp166028_c0_seq1 430 562 .
Chr1	gffcl	locus	46570087	46570805	.	+	.	ID=RLOC_00007620;geneIDs=comp61879_c0_seq1.path1;transcripts=comp61879_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46570087	46570805	.	+	.	ID=comp61879_c0_seq1.mrna1;geneID=comp61879_c0_seq1.path1;Name=comp61879_c0_seq1;Dir=antisensecoverage=98.5;identity=98.5;matches=534;mismatches=1;indels=7;unknowns=0;locus=RLOC_00007620
Chr1	stalkie_big_nohaplotig	exon	46570087	46570243	99	+	.	Parent=comp61879_c0_seq1.mrna1;Target=comp61879_c0_seq1 387 543 -
Chr1	stalkie_big_nohaplotig	exon	46570344	46570583	100	+	.	Parent=comp61879_c0_seq1.mrna1;Target=comp61879_c0_seq1 147 386 -
Chr1	stalkie_big_nohaplotig	exon	46570661	46570805	95	+	.	Parent=comp61879_c0_seq1.mrna1;Target=comp61879_c0_seq1 9 146 -
Chr1	stalkie_big_nohaplotig	CDS	46570210	46570243	.	+	0	Parent=comp61879_c0_seq1.mrna1;Target=comp61879_c0_seq1 387 420 .
Chr1	stalkie_big_nohaplotig	CDS	46570344	46570583	.	+	2	Parent=comp61879_c0_seq1.mrna1;Target=comp61879_c0_seq1 147 386 .
Chr1	stalkie_big_nohaplotig	CDS	46570661	46570728	.	+	2	Parent=comp61879_c0_seq1.mrna1;Target=comp61879_c0_seq1 79 146 .
Chr1	gffcl	locus	46573355	46573851	.	-	.	ID=RLOC_00007621;geneIDs=comp134949_c0_seq1.path1;transcripts=comp134949_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46573355	46573851	.	-	.	ID=comp134949_c0_seq1.mrna1;geneID=comp134949_c0_seq1.path1;Name=comp134949_c0_seq1;Dir=sensecoverage=70.6;identity=100.0;matches=356;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007621
Chr1	stalkie_big_nohaplotig	exon	46573355	46573445	100	-	.	Parent=comp134949_c0_seq1.mrna1;Target=comp134949_c0_seq1 282 372 +
Chr1	stalkie_big_nohaplotig	exon	46573524	46573724	100	-	.	Parent=comp134949_c0_seq1.mrna1;Target=comp134949_c0_seq1 81 281 +
Chr1	stalkie_big_nohaplotig	exon	46573788	46573851	100	-	.	Parent=comp134949_c0_seq1.mrna1;Target=comp134949_c0_seq1 17 80 +
Chr1	stalkie_big_nohaplotig	CDS	46573390	46573445	.	-	2	Parent=comp134949_c0_seq1.mrna1;Target=comp134949_c0_seq1 282 337 +
Chr1	stalkie_big_nohaplotig	CDS	46573524	46573724	.	-	2	Parent=comp134949_c0_seq1.mrna1;Target=comp134949_c0_seq1 81 281 +
Chr1	stalkie_big_nohaplotig	CDS	46573788	46573827	.	-	0	Parent=comp134949_c0_seq1.mrna1;Target=comp134949_c0_seq1 41 80 +
Chr1	gffcl	locus	46625691	46626176	.	-	.	ID=RLOC_00007622;geneIDs=comp113338_c0_seq1.path1;transcripts=comp113338_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46625691	46626176	.	-	.	ID=comp113338_c0_seq1.mrna1;geneID=comp113338_c0_seq1.path1;Name=comp113338_c0_seq1;Dir=indeterminatecoverage=95.3;identity=99.4;matches=483;mismatches=3;indels=0;unknowns=0;Target=comp113338_c0_seq1 486 1 .;CDS_Target=comp113338_c0_seq1 484 2 .;locus=RLOC_00007622
Chr1	stalkie_big_nohaplotig	exon	46625691	46626176	99	-	.	Parent=comp113338_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46625693	46626175	.	-	0	Parent=comp113338_c0_seq1.mrna1
Chr1	gffcl	locus	46648896	46660522	.	-	.	ID=RLOC_00007623;geneIDs=FBgn0041160.1.path1;transcripts=FBgn0041160.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46648896	46660522	.	-	.	ID=FBgn0041160.1.mrna1;geneID=FBgn0041160.1.path1;Name=FBgn0041160.1;Dir=sensecoverage=100.0;identity=99.6;matches=1001;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007623
Chr1	stalkie_big_nohaplotig	exon	46648896	46649389	99	-	.	Parent=FBgn0041160.1.mrna1;Target=FBgn0041160.1 512 1005 +
Chr1	stalkie_big_nohaplotig	exon	46660012	46660522	99	-	.	Parent=FBgn0041160.1.mrna1;Target=FBgn0041160.1 1 511 +
Chr1	stalkie_big_nohaplotig	CDS	46648896	46649389	.	-	2	Parent=FBgn0041160.1.mrna1;Target=FBgn0041160.1 512 1005 +
Chr1	stalkie_big_nohaplotig	CDS	46660012	46660522	.	-	0	Parent=FBgn0041160.1.mrna1;Target=FBgn0041160.1 1 511 +
Chr1	gffcl	locus	46654241	46654566	.	-	.	ID=RLOC_00007624;geneIDs=comp144115_c0_seq1.path1;transcripts=comp144115_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46654241	46654566	.	-	.	ID=comp144115_c0_seq1.mrna1;geneID=comp144115_c0_seq1.path1;Name=comp144115_c0_seq1;Dir=indeterminatecoverage=99.7;identity=86.8;matches=283;mismatches=21;indels=22;unknowns=0;Target=comp144115_c0_seq1 305 2 .;CDS_Target=comp144115_c0_seq1 90 4 .;locus=RLOC_00007624
Chr1	stalkie_big_nohaplotig	exon	46654241	46654566	86	-	.	Parent=comp144115_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46654478	46654564	.	-	0	Parent=comp144115_c0_seq1.mrna1
Chr1	gffcl	locus	46669491	46818065	.	+	.	ID=RLOC_00007625;geneIDs=comp158555_c0_seq1.path1;transcripts=comp158555_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46669491	46818065	.	+	.	ID=comp158555_c0_seq1.mrna1;geneID=comp158555_c0_seq1.path1;Name=comp158555_c0_seq1;Dir=antisensecoverage=73.6;identity=86.9;matches=523;mismatches=13;indels=66;unknowns=0;locus=RLOC_00007625
Chr1	stalkie_big_nohaplotig	exon	46669491	46669687	97	+	.	Parent=comp158555_c0_seq1.mrna1;Target=comp158555_c0_seq1 672 868 -
Chr1	stalkie_big_nohaplotig	exon	46670807	46671060	98	+	.	Parent=comp158555_c0_seq1.mrna1;Target=comp158555_c0_seq1 418 671 -
Chr1	stalkie_big_nohaplotig	exon	46771331	46771334	100	+	.	Parent=comp158555_c0_seq1.mrna1;Target=comp158555_c0_seq1 414 417 -
Chr1	stalkie_big_nohaplotig	exon	46771347	46771349	100	+	.	Parent=comp158555_c0_seq1.mrna1;Target=comp158555_c0_seq1 356 358 -
Chr1	stalkie_big_nohaplotig	exon	46772368	46772379	100	+	.	Parent=comp158555_c0_seq1.mrna1;Target=comp158555_c0_seq1 344 355 -
Chr1	stalkie_big_nohaplotig	exon	46773692	46773694	100	+	.	Parent=comp158555_c0_seq1.mrna1;Target=comp158555_c0_seq1 341 343 -
Chr1	stalkie_big_nohaplotig	exon	46790100	46790109	100	+	.	Parent=comp158555_c0_seq1.mrna1;Target=comp158555_c0_seq1 331 340 -
Chr1	stalkie_big_nohaplotig	exon	46799993	46800038	33	+	.	Parent=comp158555_c0_seq1.mrna1;Target=comp158555_c0_seq1 231 330 -
Chr1	stalkie_big_nohaplotig	exon	46810544	46810545	100	+	.	Parent=comp158555_c0_seq1.mrna1;Target=comp158555_c0_seq1 229 230 -
Chr1	stalkie_big_nohaplotig	exon	46813966	46813974	100	+	.	Parent=comp158555_c0_seq1.mrna1;Target=comp158555_c0_seq1 220 228 -
Chr1	stalkie_big_nohaplotig	exon	46818064	46818065	100	+	.	Parent=comp158555_c0_seq1.mrna1;Target=comp158555_c0_seq1 218 219 -
Chr1	stalkie_big_nohaplotig	CDS	46669589	46669687	.	+	0	Parent=comp158555_c0_seq1.mrna1;Target=comp158555_c0_seq1 672 770 .
Chr1	stalkie_big_nohaplotig	CDS	46670807	46671001	.	+	0	Parent=comp158555_c0_seq1.mrna1;Target=comp158555_c0_seq1 477 671 .
Chr1	gffcl	locus	46673598	46675593	.	+	.	ID=RLOC_00007626;geneIDs=comp153211_c0_seq1.path1;transcripts=comp153211_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46673598	46675593	.	+	.	ID=comp153211_c0_seq1.mrna1;geneID=comp153211_c0_seq1.path1;Name=comp153211_c0_seq1;Dir=sensecoverage=99.7;identity=98.6;matches=857;mismatches=6;indels=6;unknowns=0;locus=RLOC_00007626
Chr1	stalkie_big_nohaplotig	exon	46673598	46673797	99	+	.	Parent=comp153211_c0_seq1.mrna1;Target=comp153211_c0_seq1 4 203 +
Chr1	stalkie_big_nohaplotig	exon	46674781	46675008	99	+	.	Parent=comp153211_c0_seq1.mrna1;Target=comp153211_c0_seq1 204 431 +
Chr1	stalkie_big_nohaplotig	exon	46675086	46675117	100	+	.	Parent=comp153211_c0_seq1.mrna1;Target=comp153211_c0_seq1 432 463 +
Chr1	stalkie_big_nohaplotig	exon	46675185	46675593	97	+	.	Parent=comp153211_c0_seq1.mrna1;Target=comp153211_c0_seq1 464 866 +
Chr1	stalkie_big_nohaplotig	CDS	46673696	46673797	.	+	0	Parent=comp153211_c0_seq1.mrna1;Target=comp153211_c0_seq1 102 203 +
Chr1	stalkie_big_nohaplotig	CDS	46674781	46674948	.	+	0	Parent=comp153211_c0_seq1.mrna1;Target=comp153211_c0_seq1 204 371 +
Chr1	gffcl	locus	46706686	46707168	.	-	.	ID=RLOC_00007627;geneIDs=comp147943_c0_seq1.path1;transcripts=comp147943_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46706686	46707168	.	-	.	ID=comp147943_c0_seq1.mrna1;geneID=comp147943_c0_seq1.path1;Name=comp147943_c0_seq1;Dir=indeterminatecoverage=97.6;identity=99.4;matches=480;mismatches=3;indels=0;unknowns=0;Target=comp147943_c0_seq1 483 1 .;CDS_Target=comp147943_c0_seq1 69 1 .;locus=RLOC_00007627
Chr1	stalkie_big_nohaplotig	exon	46706686	46707168	99	-	.	Parent=comp147943_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46707100	46707168	.	-	0	Parent=comp147943_c0_seq1.mrna1
Chr1	gffcl	locus	46707539	46708323	.	-	.	ID=RLOC_00007628;geneIDs=comp152010_c0_seq1.path1;transcripts=comp152010_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46707539	46708323	.	-	.	ID=comp152010_c0_seq1.mrna1;geneID=comp152010_c0_seq1.path1;Name=comp152010_c0_seq1;Dir=indeterminatecoverage=100.0;identity=86.7;matches=357;mismatches=12;indels=43;unknowns=0;Target=comp152010_c0_seq1 238 167 .;locus=RLOC_00007628
Chr1	stalkie_big_nohaplotig	exon	46707539	46707708	98	-	.	Parent=comp152010_c0_seq1.mrna1;Target=comp152010_c0_seq1 434 265 .
Chr1	stalkie_big_nohaplotig	exon	46708125	46708323	78	-	.	Parent=comp152010_c0_seq1.mrna1;Target=comp152010_c0_seq1 242 1 .
Chr1	stalkie_big_nohaplotig	CDS	46708129	46708189	.	-	0	Parent=comp152010_c0_seq1.mrna1
Chr1	gffcl	locus	46708507	46709080	.	-	.	ID=RLOC_00007629;geneIDs=comp153396_c0_seq1.path2;transcripts=comp153396_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	46708507	46709080	.	-	.	ID=comp153396_c0_seq1.mrna2;geneID=comp153396_c0_seq1.path2;Name=comp153396_c0_seq1;Dir=indeterminatecoverage=89.7;identity=89.7;matches=525;mismatches=30;indels=30;unknowns=0;Target=comp153396_c0_seq1 630 65 .;CDS_Target=comp153396_c0_seq1 416 273 .;locus=RLOC_00007629
Chr1	stalkie_big_nohaplotig	exon	46708507	46709080	89	-	.	Parent=comp153396_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	46708728	46708871	.	-	0	Parent=comp153396_c0_seq1.mrna2
Chr1	gffcl	locus	46741376	46743326	.	-	.	ID=RLOC_00007631;geneIDs=comp147974_c0_seq1.path1;transcripts=comp147974_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46741376	46743326	.	-	.	ID=comp147974_c0_seq1.mrna1;geneID=comp147974_c0_seq1.path1;Name=comp147974_c0_seq1;Dir=antisensecoverage=99.6;identity=96.4;matches=863;mismatches=18;indels=14;unknowns=0;locus=RLOC_00007631
Chr1	stalkie_big_nohaplotig	exon	46741376	46741846	94	-	.	Parent=comp147974_c0_seq1.mrna1;Target=comp147974_c0_seq1 5 475 -
Chr1	stalkie_big_nohaplotig	exon	46741908	46742087	97	-	.	Parent=comp147974_c0_seq1.mrna1;Target=comp147974_c0_seq1 476 655 -
Chr1	stalkie_big_nohaplotig	exon	46743090	46743326	100	-	.	Parent=comp147974_c0_seq1.mrna1;Target=comp147974_c0_seq1 656 892 -
Chr1	stalkie_big_nohaplotig	CDS	46741632	46741846	.	-	2	Parent=comp147974_c0_seq1.mrna1;Target=comp147974_c0_seq1 261 475 .
Chr1	stalkie_big_nohaplotig	CDS	46741908	46742087	.	-	2	Parent=comp147974_c0_seq1.mrna1;Target=comp147974_c0_seq1 476 655 .
Chr1	stalkie_big_nohaplotig	CDS	46743090	46743150	.	-	0	Parent=comp147974_c0_seq1.mrna1;Target=comp147974_c0_seq1 656 716 .
Chr1	gffcl	locus	46870567	46875425	.	-	.	ID=RLOC_00007632;geneIDs=FBgn0263916.2.path1;transcripts=FBgn0263916.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46870567	46875425	.	-	.	ID=FBgn0263916.2.mrna1;geneID=FBgn0263916.2.path1;Name=FBgn0263916.2;Dir=sensecoverage=100.0;identity=99.7;matches=1277;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007632
Chr1	stalkie_big_nohaplotig	exon	46870567	46870705	99	-	.	Parent=FBgn0263916.2.mrna1;Target=FBgn0263916.2 1143 1281 +
Chr1	stalkie_big_nohaplotig	exon	46870757	46870932	99	-	.	Parent=FBgn0263916.2.mrna1;Target=FBgn0263916.2 967 1142 +
Chr1	stalkie_big_nohaplotig	exon	46871089	46871210	100	-	.	Parent=FBgn0263916.2.mrna1;Target=FBgn0263916.2 845 966 +
Chr1	stalkie_big_nohaplotig	exon	46871278	46871449	99	-	.	Parent=FBgn0263916.2.mrna1;Target=FBgn0263916.2 673 844 +
Chr1	stalkie_big_nohaplotig	exon	46872672	46872904	100	-	.	Parent=FBgn0263916.2.mrna1;Target=FBgn0263916.2 440 672 +
Chr1	stalkie_big_nohaplotig	exon	46872969	46873117	100	-	.	Parent=FBgn0263916.2.mrna1;Target=FBgn0263916.2 291 439 +
Chr1	stalkie_big_nohaplotig	exon	46874376	46874512	100	-	.	Parent=FBgn0263916.2.mrna1;Target=FBgn0263916.2 154 290 +
Chr1	stalkie_big_nohaplotig	exon	46874581	46874673	100	-	.	Parent=FBgn0263916.2.mrna1;Target=FBgn0263916.2 61 153 +
Chr1	stalkie_big_nohaplotig	exon	46875366	46875425	98	-	.	Parent=FBgn0263916.2.mrna1;Target=FBgn0263916.2 1 60 +
Chr1	stalkie_big_nohaplotig	CDS	46870567	46870705	.	-	1	Parent=FBgn0263916.2.mrna1;Target=FBgn0263916.2 1143 1281 +
Chr1	stalkie_big_nohaplotig	CDS	46870757	46870932	.	-	0	Parent=FBgn0263916.2.mrna1;Target=FBgn0263916.2 967 1142 +
Chr1	stalkie_big_nohaplotig	CDS	46871089	46871210	.	-	2	Parent=FBgn0263916.2.mrna1;Target=FBgn0263916.2 845 966 +
Chr1	stalkie_big_nohaplotig	CDS	46871278	46871449	.	-	0	Parent=FBgn0263916.2.mrna1;Target=FBgn0263916.2 673 844 +
Chr1	stalkie_big_nohaplotig	CDS	46872672	46872904	.	-	2	Parent=FBgn0263916.2.mrna1;Target=FBgn0263916.2 440 672 +
Chr1	stalkie_big_nohaplotig	CDS	46872969	46873117	.	-	1	Parent=FBgn0263916.2.mrna1;Target=FBgn0263916.2 291 439 +
Chr1	stalkie_big_nohaplotig	CDS	46874376	46874512	.	-	0	Parent=FBgn0263916.2.mrna1;Target=FBgn0263916.2 154 290 +
Chr1	stalkie_big_nohaplotig	CDS	46874581	46874673	.	-	0	Parent=FBgn0263916.2.mrna1;Target=FBgn0263916.2 61 153 +
Chr1	stalkie_big_nohaplotig	CDS	46875366	46875425	.	-	0	Parent=FBgn0263916.2.mrna1;Target=FBgn0263916.2 1 60 +
Chr1	gffcl	locus	46878872	48834469	.	-	.	ID=RLOC_00007634;geneIDs=comp146443_c0_seq1.path1;transcripts=comp146443_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46878872	48834469	.	-	.	ID=comp146443_c0_seq1.mrna1;geneID=comp146443_c0_seq1.path1;Name=comp146443_c0_seq1;Dir=indeterminatecoverage=59.8;identity=98.7;matches=821;mismatches=10;indels=1;unknowns=0;Target=comp146443_c0_seq1 301 269 .;locus=RLOC_00007634
Chr1	stalkie_big_nohaplotig	exon	46878872	46878876	100	-	.	Parent=comp146443_c0_seq1.mrna1;Target=comp146443_c0_seq1 836 832 .
Chr1	stalkie_big_nohaplotig	exon	46880641	46880648	100	-	.	Parent=comp146443_c0_seq1.mrna1;Target=comp146443_c0_seq1 831 824 .
Chr1	stalkie_big_nohaplotig	exon	46895107	46895114	87	-	.	Parent=comp146443_c0_seq1.mrna1;Target=comp146443_c0_seq1 823 816 .
Chr1	stalkie_big_nohaplotig	exon	46902232	46902235	75	-	.	Parent=comp146443_c0_seq1.mrna1;Target=comp146443_c0_seq1 815 812 .
Chr1	stalkie_big_nohaplotig	exon	46907511	46907516	100	-	.	Parent=comp146443_c0_seq1.mrna1;Target=comp146443_c0_seq1 811 806 .
Chr1	stalkie_big_nohaplotig	exon	46907683	46907688	100	-	.	Parent=comp146443_c0_seq1.mrna1;Target=comp146443_c0_seq1 805 800 .
Chr1	stalkie_big_nohaplotig	exon	46907755	46907763	100	-	.	Parent=comp146443_c0_seq1.mrna1;Target=comp146443_c0_seq1 799 791 .
Chr1	stalkie_big_nohaplotig	exon	46913099	46913102	50	-	.	Parent=comp146443_c0_seq1.mrna1;Target=comp146443_c0_seq1 790 787 .
Chr1	stalkie_big_nohaplotig	exon	46921299	46921308	80	-	.	Parent=comp146443_c0_seq1.mrna1;Target=comp146443_c0_seq1 786 778 .
Chr1	stalkie_big_nohaplotig	exon	46925331	46925336	100	-	.	Parent=comp146443_c0_seq1.mrna1;Target=comp146443_c0_seq1 777 772 .
Chr1	stalkie_big_nohaplotig	exon	46929219	46929220	100	-	.	Parent=comp146443_c0_seq1.mrna1;Target=comp146443_c0_seq1 771 770 .
Chr1	stalkie_big_nohaplotig	exon	46943559	46943569	100	-	.	Parent=comp146443_c0_seq1.mrna1;Target=comp146443_c0_seq1 769 759 .
Chr1	stalkie_big_nohaplotig	exon	46944261	46944262	100	-	.	Parent=comp146443_c0_seq1.mrna1;Target=comp146443_c0_seq1 758 757 .
Chr1	stalkie_big_nohaplotig	exon	46948598	46948599	100	-	.	Parent=comp146443_c0_seq1.mrna1;Target=comp146443_c0_seq1 756 755 .
Chr1	stalkie_big_nohaplotig	exon	48833721	48834469	99	-	.	Parent=comp146443_c0_seq1.mrna1;Target=comp146443_c0_seq1 754 6 .
Chr1	stalkie_big_nohaplotig	CDS	48834174	48834206	.	-	0	Parent=comp146443_c0_seq1.mrna1
Chr1	gffcl	locus	46901157	48818380	.	-	.	ID=RLOC_00007635;geneIDs=comp140075_c1_seq1.path1,comp150078_c0_seq1.path1;transcripts=comp150078_c0_seq1.mrna1,comp140075_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46901157	46901627	.	-	.	ID=comp150078_c0_seq1.mrna1;geneID=comp150078_c0_seq1.path1;Name=comp150078_c0_seq1;Dir=indeterminatecoverage=87.5;identity=98.7;matches=465;mismatches=5;indels=1;unknowns=0;Target=comp150078_c0_seq1 537 68 .;CDS_Target=comp150078_c0_seq1 511 455 .;locus=RLOC_00007635
Chr1	stalkie_big_nohaplotig	exon	46901157	46901627	98	-	.	Parent=comp150078_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46901183	46901239	.	-	0	Parent=comp150078_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46901462	48818380	.	-	.	ID=comp140075_c1_seq1.mrna1;geneID=comp140075_c1_seq1.path1;Name=comp140075_c1_seq1;Dir=indeterminatecoverage=64.6;identity=96.3;matches=184;mismatches=4;indels=3;unknowns=0;Target=comp140075_c1_seq1 80 3 .;locus=RLOC_00007635
Chr1	stalkie_big_nohaplotig	exon	46901462	46901469	100	-	.	Parent=comp140075_c1_seq1.mrna1;Target=comp140075_c1_seq1 188 181 .
Chr1	stalkie_big_nohaplotig	exon	46906740	46906751	66	-	.	Parent=comp140075_c1_seq1.mrna1;Target=comp140075_c1_seq1 180 172 .
Chr1	stalkie_big_nohaplotig	exon	46907457	46907468	91	-	.	Parent=comp140075_c1_seq1.mrna1;Target=comp140075_c1_seq1 171 160 .
Chr1	stalkie_big_nohaplotig	exon	46909993	46909994	100	-	.	Parent=comp140075_c1_seq1.mrna1;Target=comp140075_c1_seq1 159 158 .
Chr1	stalkie_big_nohaplotig	exon	46914720	46914724	100	-	.	Parent=comp140075_c1_seq1.mrna1;Target=comp140075_c1_seq1 157 153 .
Chr1	stalkie_big_nohaplotig	exon	46928451	46928454	100	-	.	Parent=comp140075_c1_seq1.mrna1;Target=comp140075_c1_seq1 152 149 .
Chr1	stalkie_big_nohaplotig	exon	46929169	46929170	100	-	.	Parent=comp140075_c1_seq1.mrna1;Target=comp140075_c1_seq1 148 147 .
Chr1	stalkie_big_nohaplotig	exon	46933836	46933838	100	-	.	Parent=comp140075_c1_seq1.mrna1;Target=comp140075_c1_seq1 146 144 .
Chr1	stalkie_big_nohaplotig	exon	48818238	48818380	98	-	.	Parent=comp140075_c1_seq1.mrna1;Target=comp140075_c1_seq1 143 1 .
Chr1	stalkie_big_nohaplotig	CDS	48818301	48818378	.	-	0	Parent=comp140075_c1_seq1.mrna1
Chr1	gffcl	locus	46901770	46902094	.	-	.	ID=RLOC_00007636;geneIDs=comp535234_c0_seq1.path1;transcripts=comp535234_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46901770	46902094	.	-	.	ID=comp535234_c0_seq1.mrna1;geneID=comp535234_c0_seq1.path1;Name=comp535234_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.7;matches=324;mismatches=0;indels=1;unknowns=0;Target=comp535234_c0_seq1 327 4 .;CDS_Target=comp535234_c0_seq1 199 125 .;locus=RLOC_00007636
Chr1	stalkie_big_nohaplotig	exon	46901770	46902094	99	-	.	Parent=comp535234_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46901899	46901973	.	-	0	Parent=comp535234_c0_seq1.mrna1
Chr1	gffcl	locus	46902528	46908016	.	-	.	ID=RLOC_00007637;geneIDs=FBgn0036534.1.path1;transcripts=FBgn0036534.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46902528	46908016	.	-	.	ID=FBgn0036534.1.mrna1;geneID=FBgn0036534.1.path1;Name=FBgn0036534.1;Dir=sensecoverage=100.0;identity=99.7;matches=2258;mismatches=4;indels=3;unknowns=0;locus=RLOC_00007637
Chr1	stalkie_big_nohaplotig	exon	46902528	46903427	99	-	.	Parent=FBgn0036534.1.mrna1;Target=FBgn0036534.1 1366 2262 +
Chr1	stalkie_big_nohaplotig	exon	46903496	46904410	99	-	.	Parent=FBgn0036534.1.mrna1;Target=FBgn0036534.1 451 1365 +
Chr1	stalkie_big_nohaplotig	exon	46904487	46904705	100	-	.	Parent=FBgn0036534.1.mrna1;Target=FBgn0036534.1 232 450 +
Chr1	stalkie_big_nohaplotig	exon	46907786	46908016	100	-	.	Parent=FBgn0036534.1.mrna1;Target=FBgn0036534.1 1 231 +
Chr1	stalkie_big_nohaplotig	CDS	46902528	46903427	.	-	0	Parent=FBgn0036534.1.mrna1;Target=FBgn0036534.1 1366 2262 +
Chr1	stalkie_big_nohaplotig	CDS	46903496	46904410	.	-	0	Parent=FBgn0036534.1.mrna1;Target=FBgn0036534.1 451 1365 +
Chr1	stalkie_big_nohaplotig	CDS	46904487	46904705	.	-	0	Parent=FBgn0036534.1.mrna1;Target=FBgn0036534.1 232 450 +
Chr1	stalkie_big_nohaplotig	CDS	46907786	46908016	.	-	0	Parent=FBgn0036534.1.mrna1;Target=FBgn0036534.1 1 231 +
Chr1	stalkie_big_nohaplotig	mRNA	46921479	46938993	.	+	.	ID=FBgn0036446.3.mrna1;geneID=FBgn0036446.3.path1;Name=FBgn0036446.3;Dir=sensecoverage=99.9;identity=99.4;matches=1759;mismatches=10;indels=0;unknowns=0;locus=RLOC_00007638
Chr1	stalkie_big_nohaplotig	exon	46921479	46922229	99	+	.	Parent=FBgn0036446.3.mrna1;Target=FBgn0036446.3 1 751 +
Chr1	stalkie_big_nohaplotig	exon	46935848	46936012	99	+	.	Parent=FBgn0036446.3.mrna1;Target=FBgn0036446.3 752 916 +
Chr1	stalkie_big_nohaplotig	exon	46938141	46938993	99	+	.	Parent=FBgn0036446.3.mrna1;Target=FBgn0036446.3 917 1769 +
Chr1	stalkie_big_nohaplotig	CDS	46921479	46922229	.	+	0	Parent=FBgn0036446.3.mrna1;Target=FBgn0036446.3 1 751 +
Chr1	stalkie_big_nohaplotig	CDS	46935848	46936012	.	+	2	Parent=FBgn0036446.3.mrna1;Target=FBgn0036446.3 752 916 +
Chr1	stalkie_big_nohaplotig	CDS	46938141	46938991	.	+	2	Parent=FBgn0036446.3.mrna1;Target=FBgn0036446.3 917 1767 +
Chr1	gffcl	locus	46926816	46927153	.	-	.	ID=RLOC_00007639;geneIDs=comp150879_c0_seq1.path1;transcripts=comp150879_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46926816	46927153	.	-	.	ID=comp150879_c0_seq1.mrna1;geneID=comp150879_c0_seq1.path1;Name=comp150879_c0_seq1;Dir=indeterminatecoverage=93.8;identity=92.3;matches=337;mismatches=1;indels=27;unknowns=0;Target=comp150879_c0_seq1 379 15 .;CDS_Target=comp150879_c0_seq1 243 202 .;locus=RLOC_00007639
Chr1	stalkie_big_nohaplotig	exon	46926816	46927153	92	-	.	Parent=comp150879_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46926952	46926993	.	-	0	Parent=comp150879_c0_seq1.mrna1
Chr1	gffcl	locus	46930549	46931398	.	-	.	ID=RLOC_00007640;geneIDs=comp117021_c0_seq1.path1,comp158908_c0_seq1.path1;transcripts=comp158908_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46930549	46931154	.	-	.	ID=comp158908_c0_seq1.mrna1;geneID=comp158908_c0_seq1.path1;Name=comp158908_c0_seq1;Dir=indeterminatecoverage=96.0;identity=94.1;matches=574;mismatches=3;indels=33;unknowns=0;Target=comp158908_c0_seq1 605 25 .;CDS_Target=comp158908_c0_seq1 122 27 .;locus=RLOC_00007640
Chr1	stalkie_big_nohaplotig	exon	46930549	46931154	94	-	.	Parent=comp158908_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46931057	46931152	.	-	0	Parent=comp158908_c0_seq1.mrna1
Chr1	gffcl	locus	46940460	46943469	.	+	.	ID=RLOC_00007641;geneIDs=FBgn0036446.1.path1;transcripts=FBgn0036446.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46940460	46943469	.	+	.	ID=FBgn0036446.1.mrna1;geneID=FBgn0036446.1.path1;Name=FBgn0036446.1;Dir=sensecoverage=100.0;identity=99.8;matches=1515;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007641
Chr1	stalkie_big_nohaplotig	exon	46940460	46941090	99	+	.	Parent=FBgn0036446.1.mrna1;Target=FBgn0036446.1 1 631 +
Chr1	stalkie_big_nohaplotig	exon	46942583	46943469	99	+	.	Parent=FBgn0036446.1.mrna1;Target=FBgn0036446.1 632 1518 +
Chr1	stalkie_big_nohaplotig	CDS	46940460	46941090	.	+	0	Parent=FBgn0036446.1.mrna1;Target=FBgn0036446.1 1 631 +
Chr1	stalkie_big_nohaplotig	CDS	46942583	46943469	.	+	2	Parent=FBgn0036446.1.mrna1;Target=FBgn0036446.1 632 1518 +
Chr1	gffcl	locus	46944324	46945140	.	+	.	ID=RLOC_00007642;geneIDs=comp154351_c0_seq1.path1;transcripts=comp154351_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46944324	46945140	.	+	.	ID=comp154351_c0_seq1.mrna1;geneID=comp154351_c0_seq1.path1;Name=comp154351_c0_seq1;Dir=indeterminatecoverage=99.5;identity=98.7;matches=807;mismatches=8;indels=3;unknowns=0;Target=comp154351_c0_seq1 820 5 .;CDS_Target=comp154351_c0_seq1 559 464 .;locus=RLOC_00007642
Chr1	stalkie_big_nohaplotig	exon	46944324	46945140	98	+	.	Parent=comp154351_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	46944785	46944880	.	+	0	Parent=comp154351_c0_seq1.mrna1
Chr1	gffcl	locus	46945552	46953208	.	-	.	ID=RLOC_00007643;geneIDs=FBgn0036448.1.path1;transcripts=FBgn0036448.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	46945552	46953208	.	-	.	ID=FBgn0036448.1.mrna1;geneID=FBgn0036448.1.path1;Name=FBgn0036448.1;Dir=sensecoverage=100.0;identity=98.9;matches=5737;mismatches=41;indels=21;unknowns=0;locus=RLOC_00007643
Chr1	stalkie_big_nohaplotig	exon	46945552	46945661	100	-	.	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 5669 5778 +
Chr1	stalkie_big_nohaplotig	exon	46945735	46945854	99	-	.	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 5549 5668 +
Chr1	stalkie_big_nohaplotig	exon	46945915	46946102	100	-	.	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 5361 5548 +
Chr1	stalkie_big_nohaplotig	exon	46946975	46947156	99	-	.	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 5179 5360 +
Chr1	stalkie_big_nohaplotig	exon	46947220	46947348	99	-	.	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 5050 5178 +
Chr1	stalkie_big_nohaplotig	exon	46947412	46947948	99	-	.	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 4513 5049 +
Chr1	stalkie_big_nohaplotig	exon	46948004	46948591	98	-	.	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 3925 4512 +
Chr1	stalkie_big_nohaplotig	exon	46948659	46949090	99	-	.	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 3493 3924 +
Chr1	stalkie_big_nohaplotig	exon	46949153	46950576	97	-	.	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 2090 3492 +
Chr1	stalkie_big_nohaplotig	exon	46950635	46951856	99	-	.	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 868 2089 +
Chr1	stalkie_big_nohaplotig	exon	46951916	46952665	99	-	.	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 118 867 +
Chr1	stalkie_big_nohaplotig	exon	46953092	46953208	100	-	.	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 1 117 +
Chr1	stalkie_big_nohaplotig	CDS	46945552	46945661	.	-	2	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 5669 5778 +
Chr1	stalkie_big_nohaplotig	CDS	46945735	46945854	.	-	2	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 5549 5668 +
Chr1	stalkie_big_nohaplotig	CDS	46945915	46946102	.	-	1	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 5361 5548 +
Chr1	stalkie_big_nohaplotig	CDS	46946975	46947156	.	-	0	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 5179 5360 +
Chr1	stalkie_big_nohaplotig	CDS	46947220	46947348	.	-	0	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 5050 5178 +
Chr1	stalkie_big_nohaplotig	CDS	46947412	46947948	.	-	0	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 4513 5049 +
Chr1	stalkie_big_nohaplotig	CDS	46948004	46948591	.	-	0	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 3925 4512 +
Chr1	stalkie_big_nohaplotig	CDS	46948659	46949090	.	-	0	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 3493 3924 +
Chr1	stalkie_big_nohaplotig	CDS	46949153	46950576	.	-	2	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 2090 3492 +
Chr1	stalkie_big_nohaplotig	CDS	46950635	46951856	.	-	0	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 868 2089 +
Chr1	stalkie_big_nohaplotig	CDS	46951916	46952665	.	-	0	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 118 867 +
Chr1	stalkie_big_nohaplotig	CDS	46953092	46953208	.	-	0	Parent=FBgn0036448.1.mrna1;Target=FBgn0036448.1 1 117 +
Chr1	gffcl	locus	47019597	47020123	.	+	.	ID=RLOC_00007644;geneIDs=comp113469_c0_seq1.path1;transcripts=comp113469_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47019597	47020123	.	+	.	ID=comp113469_c0_seq1.mrna1;geneID=comp113469_c0_seq1.path1;Name=comp113469_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=526;mismatches=1;indels=0;unknowns=0;Target=comp113469_c0_seq1 527 1 .;CDS_Target=comp113469_c0_seq1 319 119 .;locus=RLOC_00007644
Chr1	stalkie_big_nohaplotig	exon	47019597	47020123	99	+	.	Parent=comp113469_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	47019715	47019915	.	+	0	Parent=comp113469_c0_seq1.mrna1
Chr1	gffcl	locus	47038801	47039778	.	+	.	ID=RLOC_00007645;geneIDs=comp154951_c0_seq1.path1;transcripts=comp154951_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47038801	47039778	.	+	.	ID=comp154951_c0_seq1.mrna1;geneID=comp154951_c0_seq1.path1;Name=comp154951_c0_seq1;Dir=sensecoverage=98.4;identity=95.9;matches=905;mismatches=12;indels=27;unknowns=0;locus=RLOC_00007645
Chr1	stalkie_big_nohaplotig	exon	47038801	47038994	98	+	.	Parent=comp154951_c0_seq1.mrna1;Target=comp154951_c0_seq1 15 208 +
Chr1	stalkie_big_nohaplotig	exon	47039056	47039778	95	+	.	Parent=comp154951_c0_seq1.mrna1;Target=comp154951_c0_seq1 209 958 +
Chr1	stalkie_big_nohaplotig	CDS	47038947	47038994	.	+	0	Parent=comp154951_c0_seq1.mrna1;Target=comp154951_c0_seq1 161 208 +
Chr1	stalkie_big_nohaplotig	CDS	47039056	47039472	.	+	0	Parent=comp154951_c0_seq1.mrna1;Target=comp154951_c0_seq1 209 625 +
Chr1	gffcl	locus	47039964	47040333	.	+	.	ID=RLOC_00007646;geneIDs=comp109122_c0_seq1.path1;transcripts=comp109122_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47039964	47040333	.	+	.	ID=comp109122_c0_seq1.mrna1;geneID=comp109122_c0_seq1.path1;Name=comp109122_c0_seq1;Dir=indeterminatecoverage=44.8;identity=77.5;matches=354;mismatches=15;indels=88;unknowns=0;Target=comp109122_c0_seq1 534 79 .;CDS_Target=comp109122_c0_seq1 232 80 .;locus=RLOC_00007646
Chr1	stalkie_big_nohaplotig	exon	47039964	47040333	77	+	.	Parent=comp109122_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	47039965	47040117	.	+	0	Parent=comp109122_c0_seq1.mrna1
Chr1	gffcl	locus	47236589	47358017	.	-	.	ID=RLOC_00007647;geneIDs=comp117278_c0_seq1.path1;transcripts=comp117278_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47236589	47358017	.	-	.	ID=comp117278_c0_seq1.mrna1;geneID=comp117278_c0_seq1.path1;Name=comp117278_c0_seq1;Dir=antisensecoverage=94.7;identity=99.0;matches=303;mismatches=3;indels=0;unknowns=0;Target=comp117278_c0_seq1 138 323 .;locus=RLOC_00007647
Chr1	stalkie_big_nohaplotig	exon	47236589	47236646	100	-	.	Parent=comp117278_c0_seq1.mrna1;Target=comp117278_c0_seq1 18 75 -
Chr1	stalkie_big_nohaplotig	exon	47357770	47358017	98	-	.	Parent=comp117278_c0_seq1.mrna1;Target=comp117278_c0_seq1 76 323 -
Chr1	stalkie_big_nohaplotig	CDS	47357832	47358017	.	-	0	Parent=comp117278_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47292815	47305230	.	-	.	ID=ORF498.mrna1;geneID=ORF498.path1;Name=ORF498;Dir=sensecoverage=100.0;identity=99.3;matches=1719;mismatches=6;indels=6;unknowns=0;locus=RLOC_00007648
Chr1	stalkie_big_nohaplotig	exon	47292815	47292837	100	-	.	Parent=ORF498.mrna1;Target=ORF498 1703 1725 +
Chr1	stalkie_big_nohaplotig	exon	47298176	47298700	98	-	.	Parent=ORF498.mrna1;Target=ORF498 1184 1702 +
Chr1	stalkie_big_nohaplotig	exon	47298834	47299960	99	-	.	Parent=ORF498.mrna1;Target=ORF498 57 1183 +
Chr1	stalkie_big_nohaplotig	exon	47303034	47303067	100	-	.	Parent=ORF498.mrna1;Target=ORF498 23 56 +
Chr1	stalkie_big_nohaplotig	exon	47305209	47305230	100	-	.	Parent=ORF498.mrna1;Target=ORF498 1 22 +
Chr1	stalkie_big_nohaplotig	CDS	47292815	47292837	.	-	2	Parent=ORF498.mrna1;Target=ORF498 1703 1725 +
Chr1	stalkie_big_nohaplotig	CDS	47298176	47298700	.	-	2	Parent=ORF498.mrna1;Target=ORF498 1184 1702 +
Chr1	stalkie_big_nohaplotig	CDS	47298834	47299960	.	-	1	Parent=ORF498.mrna1;Target=ORF498 57 1183 +
Chr1	stalkie_big_nohaplotig	CDS	47303034	47303067	.	-	2	Parent=ORF498.mrna1;Target=ORF498 23 56 +
Chr1	stalkie_big_nohaplotig	CDS	47305209	47305230	.	-	0	Parent=ORF498.mrna1;Target=ORF498 1 22 +
Chr1	gffcl	locus	47280598	47281541	.	+	.	ID=RLOC_00007649;geneIDs=comp162242_c0_seq1.path1;transcripts=comp162242_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47280598	47281541	.	+	.	ID=comp162242_c0_seq1.mrna1;geneID=comp162242_c0_seq1.path1;Name=comp162242_c0_seq1;Dir=indeterminatecoverage=99.9;identity=92.2;matches=871;mismatches=42;indels=32;unknowns=0;Target=comp162242_c0_seq1 914 1 .;CDS_Target=comp162242_c0_seq1 585 436 .;locus=RLOC_00007649
Chr1	stalkie_big_nohaplotig	exon	47280598	47281541	92	+	.	Parent=comp162242_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	47281032	47281181	.	+	0	Parent=comp162242_c0_seq1.mrna1
Chr1	gffcl	locus	47281742	47282138	.	+	.	ID=RLOC_00007650;geneIDs=comp106947_c0_seq1.path1;transcripts=comp106947_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47281742	47282138	.	+	.	ID=comp106947_c0_seq1.mrna1;geneID=comp106947_c0_seq1.path1;Name=comp106947_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=395;mismatches=2;indels=0;unknowns=0;Target=comp106947_c0_seq1 397 1 .;CDS_Target=comp106947_c0_seq1 268 200 .;locus=RLOC_00007650
Chr1	stalkie_big_nohaplotig	exon	47281742	47282138	99	+	.	Parent=comp106947_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	47281941	47282009	.	+	0	Parent=comp106947_c0_seq1.mrna1
Chr1	gffcl	locus	47287107	47289639	.	-	.	ID=RLOC_00007651;geneIDs=Dp_FBgn0076932.path1;transcripts=Dp_FBgn0076932.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47287107	47289639	.	-	.	ID=Dp_FBgn0076932.mrna1;geneID=Dp_FBgn0076932.path1;Name=Dp_FBgn0076932;Dir=sensecoverage=100.0;identity=99.2;matches=1928;mismatches=10;indels=6;unknowns=0;locus=RLOC_00007651
Chr1	stalkie_big_nohaplotig	exon	47287107	47287349	95	-	.	Parent=Dp_FBgn0076932.mrna1;Target=Dp_FBgn0076932 1702 1938 +
Chr1	stalkie_big_nohaplotig	exon	47287939	47289639	99	-	.	Parent=Dp_FBgn0076932.mrna1;Target=Dp_FBgn0076932 1 1701 +
Chr1	stalkie_big_nohaplotig	CDS	47287107	47287349	.	-	0	Parent=Dp_FBgn0076932.mrna1;Target=Dp_FBgn0076932 1702 1938 +
Chr1	stalkie_big_nohaplotig	CDS	47287939	47289639	.	-	0	Parent=Dp_FBgn0076932.mrna1;Target=Dp_FBgn0076932 1 1701 +
Chr1	gffcl	locus	47536746	49505794	.	-	.	ID=RLOC_00007652;geneIDs=comp162411_c2_seq1.path1;transcripts=comp162411_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47536746	49505794	.	-	.	ID=comp162411_c2_seq1.mrna1;geneID=comp162411_c2_seq1.path1;Name=comp162411_c2_seq1;Dir=indeterminatecoverage=92.9;identity=98.0;matches=1813;mismatches=26;indels=11;unknowns=0;locus=RLOC_00007652
Chr1	stalkie_big_nohaplotig	exon	47536746	47536752	100	-	.	Parent=comp162411_c2_seq1.mrna1;Target=comp162411_c2_seq1 1852 1846 .
Chr1	stalkie_big_nohaplotig	exon	47538626	47538632	100	-	.	Parent=comp162411_c2_seq1.mrna1;Target=comp162411_c2_seq1 1845 1839 .
Chr1	stalkie_big_nohaplotig	exon	47540053	47540059	100	-	.	Parent=comp162411_c2_seq1.mrna1;Target=comp162411_c2_seq1 1838 1832 .
Chr1	stalkie_big_nohaplotig	exon	47540790	47540796	100	-	.	Parent=comp162411_c2_seq1.mrna1;Target=comp162411_c2_seq1 1831 1825 .
Chr1	stalkie_big_nohaplotig	exon	47544807	47544808	100	-	.	Parent=comp162411_c2_seq1.mrna1;Target=comp162411_c2_seq1 1824 1823 .
Chr1	stalkie_big_nohaplotig	exon	47548722	47548723	100	-	.	Parent=comp162411_c2_seq1.mrna1;Target=comp162411_c2_seq1 1822 1821 .
Chr1	stalkie_big_nohaplotig	exon	47557384	47557393	100	-	.	Parent=comp162411_c2_seq1.mrna1;Target=comp162411_c2_seq1 1820 1811 .
Chr1	stalkie_big_nohaplotig	exon	47557594	47557616	52	-	.	Parent=comp162411_c2_seq1.mrna1;Target=comp162411_c2_seq1 1810 1777 .
Chr1	stalkie_big_nohaplotig	exon	47572771	47572775	100	-	.	Parent=comp162411_c2_seq1.mrna1;Target=comp162411_c2_seq1 1776 1772 .
Chr1	stalkie_big_nohaplotig	exon	47573325	47573331	100	-	.	Parent=comp162411_c2_seq1.mrna1;Target=comp162411_c2_seq1 1771 1765 .
Chr1	stalkie_big_nohaplotig	exon	47574494	47574496	100	-	.	Parent=comp162411_c2_seq1.mrna1;Target=comp162411_c2_seq1 1764 1762 .
Chr1	stalkie_big_nohaplotig	exon	49504036	49505794	98	-	.	Parent=comp162411_c2_seq1.mrna1;Target=comp162411_c2_seq1 1761 3 .
Chr1	stalkie_big_nohaplotig	CDS	47557608	47557616	.	-	2	Parent=comp162411_c2_seq1.mrna1;Target=comp162411_c2_seq1 1787 1777 .
Chr1	stalkie_big_nohaplotig	CDS	47572771	47572775	.	-	1	Parent=comp162411_c2_seq1.mrna1;Target=comp162411_c2_seq1 1776 1772 .
Chr1	stalkie_big_nohaplotig	CDS	47573325	47573331	.	-	2	Parent=comp162411_c2_seq1.mrna1;Target=comp162411_c2_seq1 1771 1765 .
Chr1	stalkie_big_nohaplotig	CDS	47574494	47574496	.	-	2	Parent=comp162411_c2_seq1.mrna1;Target=comp162411_c2_seq1 1764 1762 .
Chr1	stalkie_big_nohaplotig	CDS	49504036	49504096	.	-	0	Parent=comp162411_c2_seq1.mrna1;Target=comp162411_c2_seq1 1761 1701 .
Chr1	gffcl	locus	47586421	47587241	.	+	.	ID=RLOC_00007654;geneIDs=ORF2146.path1;transcripts=ORF2146.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47586421	47587241	.	+	.	ID=ORF2146.mrna1;geneID=ORF2146.path1;Name=ORF2146;Dir=indeterminatecoverage=90.6;identity=96.7;matches=800;mismatches=18;indels=9;unknowns=0;Target=ORF2146 909 86 .;CDS_Target=ORF2146 909 88 .;locus=RLOC_00007654
Chr1	stalkie_big_nohaplotig	exon	47586421	47587241	96	+	.	Parent=ORF2146.mrna1
Chr1	stalkie_big_nohaplotig	CDS	47586423	47587241	.	+	0	Parent=ORF2146.mrna1
Chr1	gffcl	locus	47587482	47589392	.	+	.	ID=RLOC_00007655;geneIDs=comp150035_c0_seq1.path1;transcripts=comp150035_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47587482	47589392	.	+	.	ID=comp150035_c0_seq1.mrna1;geneID=comp150035_c0_seq1.path1;Name=comp150035_c0_seq1;Dir=sensecoverage=96.6;identity=92.2;matches=665;mismatches=26;indels=30;unknowns=0;locus=RLOC_00007655
Chr1	stalkie_big_nohaplotig	exon	47587482	47587756	91	+	.	Parent=comp150035_c0_seq1.mrna1;Target=comp150035_c0_seq1 1 263 +
Chr1	stalkie_big_nohaplotig	exon	47588947	47589392	92	+	.	Parent=comp150035_c0_seq1.mrna1;Target=comp150035_c0_seq1 264 691 +
Chr1	stalkie_big_nohaplotig	CDS	47587672	47587756	.	+	0	Parent=comp150035_c0_seq1.mrna1;Target=comp150035_c0_seq1 191 263 +
Chr1	stalkie_big_nohaplotig	CDS	47588947	47588984	.	+	2	Parent=comp150035_c0_seq1.mrna1;Target=comp150035_c0_seq1 264 301 +
Chr1	gffcl	locus	47590441	47591039	.	+	.	ID=RLOC_00007656;geneIDs=comp143449_c1_seq1.path1;transcripts=comp143449_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47590441	47591039	.	+	.	ID=comp143449_c1_seq1.mrna1;geneID=comp143449_c1_seq1.path1;Name=comp143449_c1_seq1;Dir=indeterminatecoverage=99.8;identity=98.7;matches=591;mismatches=8;indels=0;unknowns=0;Target=comp143449_c1_seq1 600 2 .;CDS_Target=comp143449_c1_seq1 534 289 .;locus=RLOC_00007656
Chr1	stalkie_big_nohaplotig	exon	47590441	47591039	98	+	.	Parent=comp143449_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	47590728	47590973	.	+	0	Parent=comp143449_c1_seq1.mrna1
Chr1	gffcl	locus	47596205	47611258	.	-	.	ID=RLOC_00007657;geneIDs=FBgn0037207.1.path1,FBgn0040505.1.path2;transcripts=FBgn0037207.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47596988	47611258	.	-	.	ID=FBgn0037207.1.mrna1;geneID=FBgn0037207.1.path1;Name=FBgn0037207.1;Dir=sensecoverage=85.7;identity=100.0;matches=771;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007657
Chr1	stalkie_big_nohaplotig	exon	47596988	47597105	100	-	.	Parent=FBgn0037207.1.mrna1;Target=FBgn0037207.1 654 771 +
Chr1	stalkie_big_nohaplotig	exon	47601093	47601254	100	-	.	Parent=FBgn0037207.1.mrna1;Target=FBgn0037207.1 492 653 +
Chr1	stalkie_big_nohaplotig	exon	47610486	47610786	100	-	.	Parent=FBgn0037207.1.mrna1;Target=FBgn0037207.1 191 491 +
Chr1	stalkie_big_nohaplotig	exon	47611069	47611258	100	-	.	Parent=FBgn0037207.1.mrna1;Target=FBgn0037207.1 1 190 +
Chr1	stalkie_big_nohaplotig	CDS	47596988	47597105	.	-	1	Parent=FBgn0037207.1.mrna1;Target=FBgn0037207.1 654 771 +
Chr1	stalkie_big_nohaplotig	CDS	47601093	47601254	.	-	1	Parent=FBgn0037207.1.mrna1;Target=FBgn0037207.1 492 653 +
Chr1	stalkie_big_nohaplotig	CDS	47610486	47610786	.	-	2	Parent=FBgn0037207.1.mrna1;Target=FBgn0037207.1 191 491 +
Chr1	stalkie_big_nohaplotig	CDS	47611069	47611258	.	-	0	Parent=FBgn0037207.1.mrna1;Target=FBgn0037207.1 1 190 +
Chr1	gffcl	locus	47618236	47619356	.	+	.	ID=RLOC_00007658;geneIDs=comp138059_c0_seq1.path1;transcripts=comp138059_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47618236	47619356	.	+	.	ID=comp138059_c0_seq1.mrna1;geneID=comp138059_c0_seq1.path1;Name=comp138059_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=1098;mismatches=11;indels=16;unknowns=0;Target=comp138059_c0_seq1 1113 1 .;CDS_Target=comp138059_c0_seq1 162 1 .;locus=RLOC_00007658
Chr1	stalkie_big_nohaplotig	exon	47618236	47619356	97	+	.	Parent=comp138059_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	47618236	47618409	.	+	0	Parent=comp138059_c0_seq1.mrna1
Chr1	gffcl	locus	47657149	47660306	.	.	.	ID=RLOC_00007659;geneIDs=FBgn0051997.3.path1,comp155403_c2_seq1.path1;transcripts=FBgn0051997.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47657999	47660306	.	-	.	ID=FBgn0051997.3.mrna1;geneID=FBgn0051997.3.path1;Name=FBgn0051997.3;Dir=sensecoverage=100.0;identity=99.1;matches=455;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007659
Chr1	stalkie_big_nohaplotig	exon	47657999	47658230	98	-	.	Parent=FBgn0051997.3.mrna1;Target=FBgn0051997.3 228 459 +
Chr1	stalkie_big_nohaplotig	exon	47658291	47658411	99	-	.	Parent=FBgn0051997.3.mrna1;Target=FBgn0051997.3 107 227 +
Chr1	stalkie_big_nohaplotig	exon	47660201	47660306	100	-	.	Parent=FBgn0051997.3.mrna1;Target=FBgn0051997.3 1 106 +
Chr1	stalkie_big_nohaplotig	CDS	47657999	47658230	.	-	1	Parent=FBgn0051997.3.mrna1;Target=FBgn0051997.3 228 459 +
Chr1	stalkie_big_nohaplotig	CDS	47658291	47658411	.	-	2	Parent=FBgn0051997.3.mrna1;Target=FBgn0051997.3 107 227 +
Chr1	stalkie_big_nohaplotig	CDS	47660201	47660306	.	-	0	Parent=FBgn0051997.3.mrna1;Target=FBgn0051997.3 1 106 +
Chr1	gffcl	locus	47684561	47686026	.	-	.	ID=RLOC_00007660;geneIDs=comp149186_c0_seq1.path1;transcripts=comp149186_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47684561	47686026	.	-	.	ID=comp149186_c0_seq1.mrna1;geneID=comp149186_c0_seq1.path1;Name=comp149186_c0_seq1;Dir=antisensecoverage=100.0;identity=97.7;matches=853;mismatches=12;indels=8;unknowns=0;locus=RLOC_00007660
Chr1	stalkie_big_nohaplotig	exon	47684561	47684949	97	-	.	Parent=comp149186_c0_seq1.mrna1;Target=comp149186_c0_seq1 1 397 -
Chr1	stalkie_big_nohaplotig	exon	47685015	47685135	99	-	.	Parent=comp149186_c0_seq1.mrna1;Target=comp149186_c0_seq1 398 518 -
Chr1	stalkie_big_nohaplotig	exon	47685672	47686026	97	-	.	Parent=comp149186_c0_seq1.mrna1;Target=comp149186_c0_seq1 519 873 -
Chr1	stalkie_big_nohaplotig	CDS	47684754	47684949	.	-	1	Parent=comp149186_c0_seq1.mrna1;Target=comp149186_c0_seq1 202 397 .
Chr1	stalkie_big_nohaplotig	CDS	47685015	47685135	.	-	2	Parent=comp149186_c0_seq1.mrna1;Target=comp149186_c0_seq1 398 518 .
Chr1	stalkie_big_nohaplotig	CDS	47685672	47685828	.	-	0	Parent=comp149186_c0_seq1.mrna1;Target=comp149186_c0_seq1 519 675 .
Chr1	gffcl	locus	47689542	47690420	.	-	.	ID=RLOC_00007661;geneIDs=FBgn0051997.2.path1;transcripts=FBgn0051997.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47689542	47690420	.	-	.	ID=FBgn0051997.2.mrna1;geneID=FBgn0051997.2.path1;Name=FBgn0051997.2;Dir=sensecoverage=100.0;identity=99.8;matches=452;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007661
Chr1	stalkie_big_nohaplotig	exon	47689542	47689728	100	-	.	Parent=FBgn0051997.2.mrna1;Target=FBgn0051997.2 267 453 +
Chr1	stalkie_big_nohaplotig	exon	47689791	47689911	100	-	.	Parent=FBgn0051997.2.mrna1;Target=FBgn0051997.2 146 266 +
Chr1	stalkie_big_nohaplotig	exon	47690276	47690420	99	-	.	Parent=FBgn0051997.2.mrna1;Target=FBgn0051997.2 1 145 +
Chr1	stalkie_big_nohaplotig	CDS	47689542	47689728	.	-	1	Parent=FBgn0051997.2.mrna1;Target=FBgn0051997.2 267 453 +
Chr1	stalkie_big_nohaplotig	CDS	47689791	47689911	.	-	2	Parent=FBgn0051997.2.mrna1;Target=FBgn0051997.2 146 266 +
Chr1	stalkie_big_nohaplotig	CDS	47690276	47690420	.	-	0	Parent=FBgn0051997.2.mrna1;Target=FBgn0051997.2 1 145 +
Chr1	gffcl	locus	47704788	47714879	.	-	.	ID=RLOC_00007662;geneIDs=comp140219_c0_seq1.path1;transcripts=comp140219_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47704788	47714879	.	-	.	ID=comp140219_c0_seq1.mrna1;geneID=comp140219_c0_seq1.path1;Name=comp140219_c0_seq1;Dir=antisensecoverage=99.7;identity=98.5;matches=716;mismatches=8;indels=3;unknowns=0;locus=RLOC_00007662
Chr1	stalkie_big_nohaplotig	exon	47704788	47704913	100	-	.	Parent=comp140219_c0_seq1.mrna1;Target=comp140219_c0_seq1 2 127 -
Chr1	stalkie_big_nohaplotig	exon	47704972	47705086	93	-	.	Parent=comp140219_c0_seq1.mrna1;Target=comp140219_c0_seq1 128 242 -
Chr1	stalkie_big_nohaplotig	exon	47714326	47714603	98	-	.	Parent=comp140219_c0_seq1.mrna1;Target=comp140219_c0_seq1 243 519 -
Chr1	stalkie_big_nohaplotig	exon	47714673	47714879	100	-	.	Parent=comp140219_c0_seq1.mrna1;Target=comp140219_c0_seq1 520 726 -
Chr1	stalkie_big_nohaplotig	CDS	47714529	47714603	.	-	1	Parent=comp140219_c0_seq1.mrna1;Target=comp140219_c0_seq1 447 519 .
Chr1	stalkie_big_nohaplotig	CDS	47714673	47714878	.	-	0	Parent=comp140219_c0_seq1.mrna1;Target=comp140219_c0_seq1 520 725 .
Chr1	gffcl	locus	47716416	47721140	.	+	.	ID=RLOC_00007663;geneIDs=comp160379_c0_seq1.path1;transcripts=comp160379_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47716416	47721140	.	+	.	ID=comp160379_c0_seq1.mrna1;geneID=comp160379_c0_seq1.path1;Name=comp160379_c0_seq1;Dir=antisensecoverage=99.9;identity=94.5;matches=1110;mismatches=58;indels=6;unknowns=0;Target=comp160379_c0_seq1 857 1096 .;locus=RLOC_00007663
Chr1	stalkie_big_nohaplotig	exon	47716416	47716864	97	+	.	Parent=comp160379_c0_seq1.mrna1;Target=comp160379_c0_seq1 721 1171 -
Chr1	stalkie_big_nohaplotig	exon	47716927	47717269	91	+	.	Parent=comp160379_c0_seq1.mrna1;Target=comp160379_c0_seq1 379 720 -
Chr1	stalkie_big_nohaplotig	exon	47720762	47721140	93	+	.	Parent=comp160379_c0_seq1.mrna1;Target=comp160379_c0_seq1 1 378 -
Chr1	stalkie_big_nohaplotig	CDS	47716489	47716728	.	+	0	Parent=comp160379_c0_seq1.mrna1
Chr1	gffcl	locus	47717958	47719179	.	-	.	ID=RLOC_00007664;geneIDs=FBgn0037206.1.path1;transcripts=FBgn0037206.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47717958	47719179	.	-	.	ID=FBgn0037206.1.mrna1;geneID=FBgn0037206.1.path1;Name=FBgn0037206.1;Dir=sensecoverage=100.0;identity=99.6;matches=1153;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007664
Chr1	stalkie_big_nohaplotig	exon	47717958	47718711	99	-	.	Parent=FBgn0037206.1.mrna1;Target=FBgn0037206.1 405 1158 +
Chr1	stalkie_big_nohaplotig	exon	47718776	47719179	99	-	.	Parent=FBgn0037206.1.mrna1;Target=FBgn0037206.1 1 404 +
Chr1	stalkie_big_nohaplotig	CDS	47717958	47718711	.	-	1	Parent=FBgn0037206.1.mrna1;Target=FBgn0037206.1 405 1158 +
Chr1	stalkie_big_nohaplotig	CDS	47718776	47719179	.	-	0	Parent=FBgn0037206.1.mrna1;Target=FBgn0037206.1 1 404 +
Chr1	gffcl	locus	47739127	47741430	.	+	.	ID=RLOC_00007665;geneIDs=comp162787_c2_seq1.path1;transcripts=comp162787_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47739127	47741430	.	+	.	ID=comp162787_c2_seq1.mrna1;geneID=comp162787_c2_seq1.path1;Name=comp162787_c2_seq1;Dir=antisensecoverage=100.0;identity=91.5;matches=1414;mismatches=45;indels=87;unknowns=0;Target=comp162787_c2_seq1 984 1409 .;locus=RLOC_00007665
Chr1	stalkie_big_nohaplotig	exon	47739127	47739690	99	+	.	Parent=comp162787_c2_seq1.mrna1;Target=comp162787_c2_seq1 913 1476 -
Chr1	stalkie_big_nohaplotig	exon	47740406	47740567	99	+	.	Parent=comp162787_c2_seq1.mrna1;Target=comp162787_c2_seq1 751 912 -
Chr1	stalkie_big_nohaplotig	exon	47740628	47741430	84	+	.	Parent=comp162787_c2_seq1.mrna1;Target=comp162787_c2_seq1 1 750 -
Chr1	stalkie_big_nohaplotig	CDS	47739194	47739619	.	+	0	Parent=comp162787_c2_seq1.mrna1
Chr1	gffcl	locus	47741588	47742196	.	-	.	ID=RLOC_00007666;geneIDs=FBgn0037204.1.path1;transcripts=FBgn0037204.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47741588	47742196	.	-	.	ID=FBgn0037204.1.mrna1;geneID=FBgn0037204.1.path1;Name=FBgn0037204.1;Dir=sensecoverage=100.0;identity=99.3;matches=542;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007666
Chr1	stalkie_big_nohaplotig	exon	47741588	47742091	99	-	.	Parent=FBgn0037204.1.mrna1;Target=FBgn0037204.1 43 546 +
Chr1	stalkie_big_nohaplotig	exon	47742155	47742196	100	-	.	Parent=FBgn0037204.1.mrna1;Target=FBgn0037204.1 1 42 +
Chr1	stalkie_big_nohaplotig	CDS	47741588	47742091	.	-	0	Parent=FBgn0037204.1.mrna1;Target=FBgn0037204.1 43 546 +
Chr1	stalkie_big_nohaplotig	CDS	47742155	47742196	.	-	0	Parent=FBgn0037204.1.mrna1;Target=FBgn0037204.1 1 42 +
Chr1	gffcl	locus	47762282	47762404	.	+	.	ID=RLOC_00007667;geneIDs=comp158853_c0_seq1.path1;transcripts=comp158853_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47762282	47762404	.	+	.	ID=comp158853_c0_seq1.mrna1;geneID=comp158853_c0_seq1.path1;Name=comp158853_c0_seq1;Dir=indeterminatecoverage=10.7;identity=95.9;matches=118;mismatches=1;indels=4;unknowns=0;Target=comp158853_c0_seq1 119 1 .;CDS_Target=comp158853_c0_seq1 119 2 .;locus=RLOC_00007667
Chr1	stalkie_big_nohaplotig	exon	47762282	47762404	95	+	.	Parent=comp158853_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	47762283	47762404	.	+	0	Parent=comp158853_c0_seq1.mrna1
Chr1	gffcl	locus	47763005	47766129	.	-	.	ID=RLOC_00007668;geneIDs=FBgn0037203.1.path1;transcripts=FBgn0037203.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47763005	47766129	.	-	.	ID=FBgn0037203.1.mrna1;geneID=FBgn0037203.1.path1;Name=FBgn0037203.1;Dir=sensecoverage=100.0;identity=99.2;matches=1827;mismatches=15;indels=0;unknowns=0;locus=RLOC_00007668
Chr1	stalkie_big_nohaplotig	exon	47763005	47763657	99	-	.	Parent=FBgn0037203.1.mrna1;Target=FBgn0037203.1 1190 1842 +
Chr1	stalkie_big_nohaplotig	exon	47764751	47764988	99	-	.	Parent=FBgn0037203.1.mrna1;Target=FBgn0037203.1 952 1189 +
Chr1	stalkie_big_nohaplotig	exon	47765051	47765337	99	-	.	Parent=FBgn0037203.1.mrna1;Target=FBgn0037203.1 665 951 +
Chr1	stalkie_big_nohaplotig	exon	47765393	47765653	98	-	.	Parent=FBgn0037203.1.mrna1;Target=FBgn0037203.1 404 664 +
Chr1	stalkie_big_nohaplotig	exon	47765727	47766129	99	-	.	Parent=FBgn0037203.1.mrna1;Target=FBgn0037203.1 1 403 +
Chr1	stalkie_big_nohaplotig	CDS	47763005	47763657	.	-	2	Parent=FBgn0037203.1.mrna1;Target=FBgn0037203.1 1190 1842 +
Chr1	stalkie_big_nohaplotig	CDS	47764751	47764988	.	-	0	Parent=FBgn0037203.1.mrna1;Target=FBgn0037203.1 952 1189 +
Chr1	stalkie_big_nohaplotig	CDS	47765051	47765337	.	-	2	Parent=FBgn0037203.1.mrna1;Target=FBgn0037203.1 665 951 +
Chr1	stalkie_big_nohaplotig	CDS	47765393	47765653	.	-	2	Parent=FBgn0037203.1.mrna1;Target=FBgn0037203.1 404 664 +
Chr1	stalkie_big_nohaplotig	CDS	47765727	47766129	.	-	0	Parent=FBgn0037203.1.mrna1;Target=FBgn0037203.1 1 403 +
Chr1	gffcl	locus	47822074	47822193	.	+	.	ID=RLOC_00007669;geneIDs=comp158062_c3_seq1.path1;transcripts=comp158062_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47822074	47822193	.	+	.	ID=comp158062_c3_seq1.mrna1;geneID=comp158062_c3_seq1.path1;Name=comp158062_c3_seq1;Dir=indeterminatecoverage=11.9;identity=99.2;matches=120;mismatches=0;indels=1;unknowns=0;Target=comp158062_c3_seq1 121 1 .;CDS_Target=comp158062_c3_seq1 108 1 .;locus=RLOC_00007669
Chr1	stalkie_big_nohaplotig	exon	47822074	47822193	99	+	.	Parent=comp158062_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	47822074	47822180	.	+	0	Parent=comp158062_c3_seq1.mrna1
Chr1	gffcl	locus	47895357	48628686	.	-	.	ID=RLOC_00007670;geneIDs=comp159821_c0_seq1.path1;transcripts=comp159821_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47895357	48628686	.	-	.	ID=comp159821_c0_seq1.mrna1;geneID=comp159821_c0_seq1.path1;Name=comp159821_c0_seq1;Dir=antisensecoverage=62.5;identity=91.2;matches=602;mismatches=27;indels=31;unknowns=0;locus=RLOC_00007670
Chr1	stalkie_big_nohaplotig	exon	47895357	47895887	91	-	.	Parent=comp159821_c0_seq1.mrna1;Target=comp159821_c0_seq1 1 537 -
Chr1	stalkie_big_nohaplotig	exon	47904384	47904459	89	-	.	Parent=comp159821_c0_seq1.mrna1;Target=comp159821_c0_seq1 538 618 -
Chr1	stalkie_big_nohaplotig	exon	48605207	48605213	85	-	.	Parent=comp159821_c0_seq1.mrna1;Target=comp159821_c0_seq1 619 625 -
Chr1	stalkie_big_nohaplotig	exon	48608802	48608805	100	-	.	Parent=comp159821_c0_seq1.mrna1;Target=comp159821_c0_seq1 626 629 -
Chr1	stalkie_big_nohaplotig	exon	48615974	48615975	100	-	.	Parent=comp159821_c0_seq1.mrna1;Target=comp159821_c0_seq1 630 631 -
Chr1	stalkie_big_nohaplotig	exon	48621149	48621154	100	-	.	Parent=comp159821_c0_seq1.mrna1;Target=comp159821_c0_seq1 632 637 -
Chr1	stalkie_big_nohaplotig	exon	48621168	48621173	100	-	.	Parent=comp159821_c0_seq1.mrna1;Target=comp159821_c0_seq1 695 700 -
Chr1	stalkie_big_nohaplotig	exon	48628680	48628686	100	-	.	Parent=comp159821_c0_seq1.mrna1;Target=comp159821_c0_seq1 701 707 -
Chr1	stalkie_big_nohaplotig	CDS	47895865	47895887	.	-	1	Parent=comp159821_c0_seq1.mrna1;Target=comp159821_c0_seq1 515 537 .
Chr1	stalkie_big_nohaplotig	CDS	47904384	47904427	.	-	0	Parent=comp159821_c0_seq1.mrna1;Target=comp159821_c0_seq1 538 586 .
Chr1	gffcl	locus	47909066	47914724	.	+	.	ID=RLOC_00007671;geneIDs=FBgn0044324.1.path1;transcripts=FBgn0044324.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47909066	47914724	.	+	.	ID=FBgn0044324.1.mrna1;geneID=FBgn0044324.1.path1;Name=FBgn0044324.1;Dir=sensecoverage=100.0;identity=99.9;matches=2819;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007671
Chr1	stalkie_big_nohaplotig	exon	47909066	47909140	100	+	.	Parent=FBgn0044324.1.mrna1;Target=FBgn0044324.1 2 76 +
Chr1	stalkie_big_nohaplotig	exon	47909213	47909605	99	+	.	Parent=FBgn0044324.1.mrna1;Target=FBgn0044324.1 77 469 +
Chr1	stalkie_big_nohaplotig	exon	47910227	47910443	100	+	.	Parent=FBgn0044324.1.mrna1;Target=FBgn0044324.1 470 686 +
Chr1	stalkie_big_nohaplotig	exon	47911307	47911958	100	+	.	Parent=FBgn0044324.1.mrna1;Target=FBgn0044324.1 687 1338 +
Chr1	stalkie_big_nohaplotig	exon	47912045	47912185	100	+	.	Parent=FBgn0044324.1.mrna1;Target=FBgn0044324.1 1339 1479 +
Chr1	stalkie_big_nohaplotig	exon	47912246	47912894	99	+	.	Parent=FBgn0044324.1.mrna1;Target=FBgn0044324.1 1480 2128 +
Chr1	stalkie_big_nohaplotig	exon	47913964	47914563	99	+	.	Parent=FBgn0044324.1.mrna1;Target=FBgn0044324.1 2129 2728 +
Chr1	stalkie_big_nohaplotig	exon	47914630	47914724	100	+	.	Parent=FBgn0044324.1.mrna1;Target=FBgn0044324.1 2729 2823 +
Chr1	stalkie_big_nohaplotig	CDS	47909068	47909140	.	+	0	Parent=FBgn0044324.1.mrna1;Target=FBgn0044324.1 4 76 +
Chr1	stalkie_big_nohaplotig	CDS	47909213	47909605	.	+	2	Parent=FBgn0044324.1.mrna1;Target=FBgn0044324.1 77 469 +
Chr1	stalkie_big_nohaplotig	CDS	47910227	47910443	.	+	2	Parent=FBgn0044324.1.mrna1;Target=FBgn0044324.1 470 686 +
Chr1	stalkie_big_nohaplotig	CDS	47911307	47911958	.	+	1	Parent=FBgn0044324.1.mrna1;Target=FBgn0044324.1 687 1338 +
Chr1	stalkie_big_nohaplotig	CDS	47912045	47912185	.	+	0	Parent=FBgn0044324.1.mrna1;Target=FBgn0044324.1 1339 1479 +
Chr1	stalkie_big_nohaplotig	CDS	47912246	47912894	.	+	0	Parent=FBgn0044324.1.mrna1;Target=FBgn0044324.1 1480 2128 +
Chr1	stalkie_big_nohaplotig	CDS	47913964	47914563	.	+	2	Parent=FBgn0044324.1.mrna1;Target=FBgn0044324.1 2129 2728 +
Chr1	stalkie_big_nohaplotig	CDS	47914630	47914724	.	+	2	Parent=FBgn0044324.1.mrna1;Target=FBgn0044324.1 2729 2823 +
Chr1	gffcl	locus	47915028	47917384	.	-	.	ID=RLOC_00007672;geneIDs=FBgn0037200.1.path1;transcripts=FBgn0037200.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47915028	47917384	.	-	.	ID=FBgn0037200.1.mrna1;geneID=FBgn0037200.1.path1;Name=FBgn0037200.1;Dir=sensecoverage=100.0;identity=99.4;matches=1312;mismatches=8;indels=0;unknowns=0;locus=RLOC_00007672
Chr1	stalkie_big_nohaplotig	exon	47915028	47915118	100	-	.	Parent=FBgn0037200.1.mrna1;Target=FBgn0037200.1 1230 1320 +
Chr1	stalkie_big_nohaplotig	exon	47915221	47916377	99	-	.	Parent=FBgn0037200.1.mrna1;Target=FBgn0037200.1 73 1229 +
Chr1	stalkie_big_nohaplotig	exon	47917313	47917384	95	-	.	Parent=FBgn0037200.1.mrna1;Target=FBgn0037200.1 1 72 +
Chr1	stalkie_big_nohaplotig	CDS	47915028	47915118	.	-	1	Parent=FBgn0037200.1.mrna1;Target=FBgn0037200.1 1230 1320 +
Chr1	stalkie_big_nohaplotig	CDS	47915221	47916377	.	-	0	Parent=FBgn0037200.1.mrna1;Target=FBgn0037200.1 73 1229 +
Chr1	stalkie_big_nohaplotig	CDS	47917313	47917384	.	-	0	Parent=FBgn0037200.1.mrna1;Target=FBgn0037200.1 1 72 +
Chr1	gffcl	locus	47925347	47930143	.	+	.	ID=RLOC_00007673;geneIDs=FBgn0010348.1.path1;transcripts=FBgn0010348.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47925347	47930143	.	+	.	ID=FBgn0010348.1.mrna1;geneID=FBgn0010348.1.path1;Name=FBgn0010348.1;Dir=sensecoverage=100.0;identity=100.0;matches=561;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007673
Chr1	stalkie_big_nohaplotig	exon	47925347	47925509	100	+	.	Parent=FBgn0010348.1.mrna1;Target=FBgn0010348.1 1 163 +
Chr1	stalkie_big_nohaplotig	exon	47925595	47925704	100	+	.	Parent=FBgn0010348.1.mrna1;Target=FBgn0010348.1 164 273 +
Chr1	stalkie_big_nohaplotig	exon	47925944	47926069	100	+	.	Parent=FBgn0010348.1.mrna1;Target=FBgn0010348.1 274 399 +
Chr1	stalkie_big_nohaplotig	exon	47929982	47930143	100	+	.	Parent=FBgn0010348.1.mrna1;Target=FBgn0010348.1 400 561 +
Chr1	stalkie_big_nohaplotig	CDS	47925347	47925509	.	+	0	Parent=FBgn0010348.1.mrna1;Target=FBgn0010348.1 1 163 +
Chr1	stalkie_big_nohaplotig	CDS	47925595	47925704	.	+	2	Parent=FBgn0010348.1.mrna1;Target=FBgn0010348.1 164 273 +
Chr1	stalkie_big_nohaplotig	CDS	47925944	47926069	.	+	0	Parent=FBgn0010348.1.mrna1;Target=FBgn0010348.1 274 399 +
Chr1	stalkie_big_nohaplotig	CDS	47929982	47930143	.	+	0	Parent=FBgn0010348.1.mrna1;Target=FBgn0010348.1 400 561 +
Chr1	gffcl	locus	47930570	47931172	.	-	.	ID=RLOC_00007674;geneIDs=comp119431_c0_seq1.path1;transcripts=comp119431_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47930570	47931172	.	-	.	ID=comp119431_c0_seq1.mrna1;geneID=comp119431_c0_seq1.path1;Name=comp119431_c0_seq1;Dir=indeterminatecoverage=95.8;identity=96.6;matches=596;mismatches=6;indels=15;unknowns=0;Target=comp119431_c0_seq1 635 20 .;CDS_Target=comp119431_c0_seq1 242 69 .;locus=RLOC_00007674
Chr1	stalkie_big_nohaplotig	exon	47930570	47931172	96	-	.	Parent=comp119431_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	47930950	47931123	.	-	0	Parent=comp119431_c0_seq1.mrna1
Chr1	gffcl	locus	47935073	47935849	.	+	.	ID=RLOC_00007675;geneIDs=FBgn0037199.1.path1;transcripts=FBgn0037199.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47935073	47935849	.	+	.	ID=FBgn0037199.1.mrna1;geneID=FBgn0037199.1.path1;Name=FBgn0037199.1;Dir=sensecoverage=98.4;identity=98.6;matches=614;mismatches=9;indels=0;unknowns=0;locus=RLOC_00007675
Chr1	stalkie_big_nohaplotig	exon	47935073	47935253	96	+	.	Parent=FBgn0037199.1.mrna1;Target=FBgn0037199.1 11 191 +
Chr1	stalkie_big_nohaplotig	exon	47935332	47935461	99	+	.	Parent=FBgn0037199.1.mrna1;Target=FBgn0037199.1 192 321 +
Chr1	stalkie_big_nohaplotig	exon	47935538	47935849	99	+	.	Parent=FBgn0037199.1.mrna1;Target=FBgn0037199.1 322 633 +
Chr1	stalkie_big_nohaplotig	CDS	47935075	47935253	.	+	0	Parent=FBgn0037199.1.mrna1;Target=FBgn0037199.1 13 191 +
Chr1	stalkie_big_nohaplotig	CDS	47935332	47935461	.	+	1	Parent=FBgn0037199.1.mrna1;Target=FBgn0037199.1 192 321 +
Chr1	stalkie_big_nohaplotig	CDS	47935538	47935849	.	+	0	Parent=FBgn0037199.1.mrna1;Target=FBgn0037199.1 322 633 +
Chr1	gffcl	locus	47936971	47950250	.	+	.	ID=RLOC_00007676;geneIDs=comp155695_c0_seq1.path1;transcripts=comp155695_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47936971	47950250	.	+	.	ID=comp155695_c0_seq1.mrna1;geneID=comp155695_c0_seq1.path1;Name=comp155695_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.5;matches=3569;mismatches=43;indels=10;unknowns=0;locus=RLOC_00007676
Chr1	stalkie_big_nohaplotig	exon	47936971	47937994	96	+	.	Parent=comp155695_c0_seq1.mrna1;Target=comp155695_c0_seq1 1037 10 .
Chr1	stalkie_big_nohaplotig	exon	47938061	47938114	98	+	.	Parent=comp155695_c0_seq1.mrna1;Target=comp155695_c0_seq1 1091 1038 .
Chr1	stalkie_big_nohaplotig	exon	47939712	47939715	100	+	.	Parent=comp155695_c0_seq1.mrna1;Target=comp155695_c0_seq1 1095 1092 .
Chr1	stalkie_big_nohaplotig	exon	47940493	47940514	86	+	.	Parent=comp155695_c0_seq1.mrna1;Target=comp155695_c0_seq1 1117 1096 .
Chr1	stalkie_big_nohaplotig	exon	47940577	47940617	100	+	.	Parent=comp155695_c0_seq1.mrna1;Target=comp155695_c0_seq1 1158 1118 .
Chr1	stalkie_big_nohaplotig	exon	47940951	47941086	100	+	.	Parent=comp155695_c0_seq1.mrna1;Target=comp155695_c0_seq1 1294 1159 .
Chr1	stalkie_big_nohaplotig	exon	47943937	47945033	99	+	.	Parent=comp155695_c0_seq1.mrna1;Target=comp155695_c0_seq1 2391 1295 .
Chr1	stalkie_big_nohaplotig	exon	47947386	47948368	99	+	.	Parent=comp155695_c0_seq1.mrna1;Target=comp155695_c0_seq1 3378 2392 .
Chr1	stalkie_big_nohaplotig	exon	47948431	47948484	100	+	.	Parent=comp155695_c0_seq1.mrna1;Target=comp155695_c0_seq1 3432 3379 .
Chr1	stalkie_big_nohaplotig	exon	47950053	47950250	99	+	.	Parent=comp155695_c0_seq1.mrna1;Target=comp155695_c0_seq1 3630 3433 .
Chr1	stalkie_big_nohaplotig	CDS	47943939	47945033	.	+	0	Parent=comp155695_c0_seq1.mrna1;Target=comp155695_c0_seq1 2391 1297 .
Chr1	stalkie_big_nohaplotig	CDS	47947386	47947505	.	+	0	Parent=comp155695_c0_seq1.mrna1;Target=comp155695_c0_seq1 2511 2392 .
Chr1	gffcl	locus	47950292	47956427	.	+	.	ID=RLOC_00007677;geneIDs=comp158310_c0_seq1.path1;transcripts=comp158310_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47950292	47956427	.	+	.	ID=comp158310_c0_seq1.mrna1;geneID=comp158310_c0_seq1.path1;Name=comp158310_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=1860;mismatches=19;indels=2;unknowns=0;locus=RLOC_00007677
Chr1	stalkie_big_nohaplotig	exon	47950292	47950544	98	+	.	Parent=comp158310_c0_seq1.mrna1;Target=comp158310_c0_seq1 1629 1881 -
Chr1	stalkie_big_nohaplotig	exon	47953931	47955048	99	+	.	Parent=comp158310_c0_seq1.mrna1;Target=comp158310_c0_seq1 511 1628 -
Chr1	stalkie_big_nohaplotig	exon	47955920	47956427	98	+	.	Parent=comp158310_c0_seq1.mrna1;Target=comp158310_c0_seq1 1 510 -
Chr1	stalkie_big_nohaplotig	CDS	47950451	47950544	.	+	0	Parent=comp158310_c0_seq1.mrna1;Target=comp158310_c0_seq1 1629 1722 .
Chr1	stalkie_big_nohaplotig	CDS	47953931	47955048	.	+	2	Parent=comp158310_c0_seq1.mrna1;Target=comp158310_c0_seq1 511 1628 .
Chr1	stalkie_big_nohaplotig	CDS	47955920	47956024	.	+	0	Parent=comp158310_c0_seq1.mrna1;Target=comp158310_c0_seq1 406 510 .
Chr1	gffcl	locus	47964369	47968331	.	-	.	ID=RLOC_00007679;geneIDs=comp151855_c1_seq1.path2,comp153825_c0_seq1.path1;transcripts=comp151855_c1_seq1.mrna2,comp153825_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47964369	47967789	.	-	.	ID=comp151855_c1_seq1.mrna2;geneID=comp151855_c1_seq1.path2;Name=comp151855_c1_seq1;Dir=antisensecoverage=40.5;identity=96.1;matches=147;mismatches=3;indels=3;unknowns=0;locus=RLOC_00007679
Chr1	stalkie_big_nohaplotig	exon	47964369	47964497	95	-	.	Parent=comp151855_c1_seq1.mrna2;Target=comp151855_c1_seq1 221 346 -
Chr1	stalkie_big_nohaplotig	exon	47967766	47967789	100	-	.	Parent=comp151855_c1_seq1.mrna2;Target=comp151855_c1_seq1 347 370 -
Chr1	stalkie_big_nohaplotig	CDS	47964427	47964497	.	-	1	Parent=comp151855_c1_seq1.mrna2;Target=comp151855_c1_seq1 279 346 .
Chr1	stalkie_big_nohaplotig	CDS	47967766	47967787	.	-	2	Parent=comp151855_c1_seq1.mrna2;Target=comp151855_c1_seq1 347 368 .
Chr1	stalkie_big_nohaplotig	mRNA	47967460	47968331	.	-	.	ID=comp153825_c0_seq1.mrna1;geneID=comp153825_c0_seq1.path1;Name=comp153825_c0_seq1;Dir=sensecoverage=99.9;identity=98.0;matches=747;mismatches=12;indels=3;unknowns=0;locus=RLOC_00007679
Chr1	stalkie_big_nohaplotig	exon	47967460	47968017	97	-	.	Parent=comp153825_c0_seq1.mrna1;Target=comp153825_c0_seq1 204 760 +
Chr1	stalkie_big_nohaplotig	exon	47968069	47968122	100	-	.	Parent=comp153825_c0_seq1.mrna1;Target=comp153825_c0_seq1 150 203 +
Chr1	stalkie_big_nohaplotig	exon	47968183	47968331	97	-	.	Parent=comp153825_c0_seq1.mrna1;Target=comp153825_c0_seq1 1 149 +
Chr1	stalkie_big_nohaplotig	CDS	47967943	47968017	.	-	0	Parent=comp153825_c0_seq1.mrna1;Target=comp153825_c0_seq1 204 278 +
Chr1	stalkie_big_nohaplotig	CDS	47968069	47968122	.	-	0	Parent=comp153825_c0_seq1.mrna1;Target=comp153825_c0_seq1 150 203 +
Chr1	stalkie_big_nohaplotig	CDS	47968183	47968206	.	-	0	Parent=comp153825_c0_seq1.mrna1;Target=comp153825_c0_seq1 126 149 +
Chr1	gffcl	locus	47967954	48008648	.	+	.	ID=RLOC_00007680;geneIDs=comp161746_c10_seq1.path2;transcripts=comp161746_c10_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	47967954	48008648	.	+	.	ID=comp161746_c10_seq1.mrna2;geneID=comp161746_c10_seq1.path2;Name=comp161746_c10_seq1;Dir=indeterminatecoverage=98.6;identity=99.6;matches=2886;mismatches=7;indels=4;unknowns=0;Target=comp161746_c10_seq1 996 682 .;locus=RLOC_00007680
Chr1	stalkie_big_nohaplotig	exon	47967954	47967959	100	+	.	Parent=comp161746_c10_seq1.mrna2;Target=comp161746_c10_seq1 45 40 .
Chr1	stalkie_big_nohaplotig	exon	48005761	48008648	99	+	.	Parent=comp161746_c10_seq1.mrna2;Target=comp161746_c10_seq1 2935 46 .
Chr1	stalkie_big_nohaplotig	CDS	48006396	48006708	.	+	0	Parent=comp161746_c10_seq1.mrna2
Chr1	gffcl	locus	47970673	47974976	.	-	.	ID=RLOC_00007681;geneIDs=FBgn0003292.1.path1;transcripts=FBgn0003292.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	47970673	47974976	.	-	.	ID=FBgn0003292.1.mrna1;geneID=FBgn0003292.1.path1;Name=FBgn0003292.1;Dir=sensecoverage=100.0;identity=99.1;matches=2684;mismatches=24;indels=0;unknowns=0;locus=RLOC_00007681
Chr1	stalkie_big_nohaplotig	exon	47970673	47971388	98	-	.	Parent=FBgn0003292.1.mrna1;Target=FBgn0003292.1 1994 2709 +
Chr1	stalkie_big_nohaplotig	exon	47971460	47971646	97	-	.	Parent=FBgn0003292.1.mrna1;Target=FBgn0003292.1 1807 1993 +
Chr1	stalkie_big_nohaplotig	exon	47973051	47973640	100	-	.	Parent=FBgn0003292.1.mrna1;Target=FBgn0003292.1 1217 1806 +
Chr1	stalkie_big_nohaplotig	exon	47973701	47974263	99	-	.	Parent=FBgn0003292.1.mrna1;Target=FBgn0003292.1 654 1216 +
Chr1	stalkie_big_nohaplotig	exon	47974325	47974976	99	-	.	Parent=FBgn0003292.1.mrna1;Target=FBgn0003292.1 2 653 +
Chr1	stalkie_big_nohaplotig	CDS	47970673	47971388	.	-	2	Parent=FBgn0003292.1.mrna1;Target=FBgn0003292.1 1994 2709 +
Chr1	stalkie_big_nohaplotig	CDS	47971460	47971646	.	-	0	Parent=FBgn0003292.1.mrna1;Target=FBgn0003292.1 1807 1993 +
Chr1	stalkie_big_nohaplotig	CDS	47973051	47973640	.	-	2	Parent=FBgn0003292.1.mrna1;Target=FBgn0003292.1 1217 1806 +
Chr1	stalkie_big_nohaplotig	CDS	47973701	47974263	.	-	1	Parent=FBgn0003292.1.mrna1;Target=FBgn0003292.1 654 1216 +
Chr1	stalkie_big_nohaplotig	CDS	47974325	47974974	.	-	0	Parent=FBgn0003292.1.mrna1;Target=FBgn0003292.1 4 653 +
Chr1	gffcl	locus	48035113	48035820	.	+	.	ID=RLOC_00007683;geneIDs=FBgn0036179.path1;transcripts=FBgn0036179.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48035113	48035820	.	+	.	ID=FBgn0036179.mrna1;geneID=FBgn0036179.path1;Name=FBgn0036179;Dir=indeterminatecoverage=99.6;identity=99.9;matches=707;mismatches=1;indels=0;unknowns=0;Target=FBgn0036179 711 4 .;locus=RLOC_00007683
Chr1	stalkie_big_nohaplotig	exon	48035113	48035820	99	+	.	Parent=FBgn0036179.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48035113	48035820	.	+	0	Parent=FBgn0036179.mrna1
Chr1	gffcl	locus	48036250	48036938	.	+	.	ID=RLOC_00007684;geneIDs=comp153095_c1_seq1.path1;transcripts=comp153095_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48036250	48036938	.	+	.	ID=comp153095_c1_seq1.mrna1;geneID=comp153095_c1_seq1.path1;Name=comp153095_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=683;mismatches=5;indels=1;unknowns=0;Target=comp153095_c1_seq1 688 1 .;CDS_Target=comp153095_c1_seq1 60 1 .;locus=RLOC_00007684
Chr1	stalkie_big_nohaplotig	exon	48036250	48036938	99	+	.	Parent=comp153095_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48036250	48036309	.	+	0	Parent=comp153095_c1_seq1.mrna1
Chr1	gffcl	locus	48042090	48048393	.	+	.	ID=RLOC_00007685;geneIDs=FBgn0036180.1.path1;transcripts=FBgn0036180.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48042090	48048393	.	+	.	ID=FBgn0036180.1.mrna1;geneID=FBgn0036180.1.path1;Name=FBgn0036180.1;Dir=sensecoverage=100.0;identity=100.0;matches=2076;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007685
Chr1	stalkie_big_nohaplotig	exon	48042090	48042329	100	+	.	Parent=FBgn0036180.1.mrna1;Target=FBgn0036180.1 1 240 +
Chr1	stalkie_big_nohaplotig	exon	48044050	48044114	100	+	.	Parent=FBgn0036180.1.mrna1;Target=FBgn0036180.1 241 305 +
Chr1	stalkie_big_nohaplotig	exon	48044178	48044700	100	+	.	Parent=FBgn0036180.1.mrna1;Target=FBgn0036180.1 306 828 +
Chr1	stalkie_big_nohaplotig	exon	48044770	48044926	100	+	.	Parent=FBgn0036180.1.mrna1;Target=FBgn0036180.1 829 985 +
Chr1	stalkie_big_nohaplotig	exon	48046428	48046630	100	+	.	Parent=FBgn0036180.1.mrna1;Target=FBgn0036180.1 986 1188 +
Chr1	stalkie_big_nohaplotig	exon	48046695	48047266	100	+	.	Parent=FBgn0036180.1.mrna1;Target=FBgn0036180.1 1189 1760 +
Chr1	stalkie_big_nohaplotig	exon	48047888	48048102	100	+	.	Parent=FBgn0036180.1.mrna1;Target=FBgn0036180.1 1761 1975 +
Chr1	stalkie_big_nohaplotig	exon	48048293	48048393	100	+	.	Parent=FBgn0036180.1.mrna1;Target=FBgn0036180.1 1976 2076 +
Chr1	stalkie_big_nohaplotig	CDS	48042090	48042329	.	+	0	Parent=FBgn0036180.1.mrna1;Target=FBgn0036180.1 1 240 +
Chr1	stalkie_big_nohaplotig	CDS	48044050	48044114	.	+	0	Parent=FBgn0036180.1.mrna1;Target=FBgn0036180.1 241 305 +
Chr1	stalkie_big_nohaplotig	CDS	48044178	48044700	.	+	1	Parent=FBgn0036180.1.mrna1;Target=FBgn0036180.1 306 828 +
Chr1	stalkie_big_nohaplotig	CDS	48044770	48044926	.	+	0	Parent=FBgn0036180.1.mrna1;Target=FBgn0036180.1 829 985 +
Chr1	stalkie_big_nohaplotig	CDS	48046428	48046630	.	+	2	Parent=FBgn0036180.1.mrna1;Target=FBgn0036180.1 986 1188 +
Chr1	stalkie_big_nohaplotig	CDS	48046695	48047266	.	+	0	Parent=FBgn0036180.1.mrna1;Target=FBgn0036180.1 1189 1760 +
Chr1	stalkie_big_nohaplotig	CDS	48047888	48048102	.	+	1	Parent=FBgn0036180.1.mrna1;Target=FBgn0036180.1 1761 1975 +
Chr1	stalkie_big_nohaplotig	CDS	48048293	48048393	.	+	2	Parent=FBgn0036180.1.mrna1;Target=FBgn0036180.1 1976 2076 +
Chr1	gffcl	locus	48050914	48052015	.	-	.	ID=RLOC_00007686;geneIDs=comp148521_c0_seq1.path1;transcripts=comp148521_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48050914	48052015	.	-	.	ID=comp148521_c0_seq1.mrna1;geneID=comp148521_c0_seq1.path1;Name=comp148521_c0_seq1;Dir=sensecoverage=90.0;identity=99.9;matches=1034;mismatches=1;indels=0;unknowns=0;Target=comp148521_c0_seq1 299 688 +;locus=RLOC_00007686
Chr1	stalkie_big_nohaplotig	exon	48050914	48051718	99	-	.	Parent=comp148521_c0_seq1.mrna1;Target=comp148521_c0_seq1 252 1056 +
Chr1	stalkie_big_nohaplotig	exon	48051786	48052015	100	-	.	Parent=comp148521_c0_seq1.mrna1;Target=comp148521_c0_seq1 22 251 +
Chr1	stalkie_big_nohaplotig	CDS	48051282	48051671	.	-	0	Parent=comp148521_c0_seq1.mrna1
Chr1	gffcl	locus	48055308	48055541	.	+	.	ID=RLOC_00007687;geneIDs=comp135802_c0_seq1.path1;transcripts=comp135802_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48055308	48055541	.	+	.	ID=comp135802_c0_seq1.mrna1;geneID=comp135802_c0_seq1.path1;Name=comp135802_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=234;mismatches=0;indels=0;unknowns=0;Target=comp135802_c0_seq1 234 1 .;CDS_Target=comp135802_c0_seq1 77 3 .;locus=RLOC_00007687
Chr1	stalkie_big_nohaplotig	exon	48055308	48055541	100	+	.	Parent=comp135802_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48055310	48055384	.	+	0	Parent=comp135802_c0_seq1.mrna1
Chr1	gffcl	locus	48074508	48076083	.	-	.	ID=RLOC_00007688;geneIDs=comp154647_c0_seq1.path1;transcripts=comp154647_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48074508	48076083	.	-	.	ID=comp154647_c0_seq1.mrna1;geneID=comp154647_c0_seq1.path1;Name=comp154647_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=714;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007688
Chr1	stalkie_big_nohaplotig	exon	48074508	48074564	100	-	.	Parent=comp154647_c0_seq1.mrna1;Target=comp154647_c0_seq1 1 57 -
Chr1	stalkie_big_nohaplotig	exon	48075318	48075385	100	-	.	Parent=comp154647_c0_seq1.mrna1;Target=comp154647_c0_seq1 58 125 -
Chr1	stalkie_big_nohaplotig	exon	48075491	48076083	99	-	.	Parent=comp154647_c0_seq1.mrna1;Target=comp154647_c0_seq1 126 718 -
Chr1	stalkie_big_nohaplotig	CDS	48074508	48074564	.	-	0	Parent=comp154647_c0_seq1.mrna1;Target=comp154647_c0_seq1 1 57 .
Chr1	stalkie_big_nohaplotig	CDS	48075318	48075385	.	-	2	Parent=comp154647_c0_seq1.mrna1;Target=comp154647_c0_seq1 58 125 .
Chr1	stalkie_big_nohaplotig	CDS	48075491	48076082	.	-	0	Parent=comp154647_c0_seq1.mrna1;Target=comp154647_c0_seq1 126 717 .
Chr1	gffcl	locus	48078931	48079420	.	+	.	ID=RLOC_00007689;geneIDs=comp144772_c0_seq1.path1;transcripts=comp144772_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48078931	48079420	.	+	.	ID=comp144772_c0_seq1.mrna1;geneID=comp144772_c0_seq1.path1;Name=comp144772_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=488;mismatches=2;indels=0;unknowns=0;Target=comp144772_c0_seq1 490 1 .;CDS_Target=comp144772_c0_seq1 134 3 .;locus=RLOC_00007689
Chr1	stalkie_big_nohaplotig	exon	48078931	48079420	99	+	.	Parent=comp144772_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48078933	48079064	.	+	0	Parent=comp144772_c0_seq1.mrna1
Chr1	gffcl	locus	48090827	48091441	.	+	.	ID=RLOC_00007690;geneIDs=comp135901_c0_seq1.path1;transcripts=comp135901_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48090827	48091441	.	+	.	ID=comp135901_c0_seq1.mrna1;geneID=comp135901_c0_seq1.path1;Name=comp135901_c0_seq1;Dir=antisensecoverage=100.0;identity=98.7;matches=535;mismatches=1;indels=6;unknowns=0;locus=RLOC_00007690
Chr1	stalkie_big_nohaplotig	exon	48090827	48091030	100	+	.	Parent=comp135901_c0_seq1.mrna1;Target=comp135901_c0_seq1 333 536 -
Chr1	stalkie_big_nohaplotig	exon	48091104	48091441	97	+	.	Parent=comp135901_c0_seq1.mrna1;Target=comp135901_c0_seq1 1 332 -
Chr1	stalkie_big_nohaplotig	CDS	48091024	48091030	.	+	0	Parent=comp135901_c0_seq1.mrna1;Target=comp135901_c0_seq1 333 339 .
Chr1	stalkie_big_nohaplotig	CDS	48091104	48091441	.	+	2	Parent=comp135901_c0_seq1.mrna1;Target=comp135901_c0_seq1 1 332 .
Chr1	gffcl	locus	48091477	48092341	.	+	.	ID=RLOC_00007691;geneIDs=FBgn0036226.1.path1;transcripts=FBgn0036226.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48091477	48092341	.	+	.	ID=FBgn0036226.1.mrna1;geneID=FBgn0036226.1.path1;Name=FBgn0036226.1;Dir=indeterminatecoverage=99.4;identity=98.7;matches=854;mismatches=8;indels=3;unknowns=0;Target=FBgn0036226.1 867 6 .;CDS_Target=FBgn0036226.1 867 7 .;locus=RLOC_00007691
Chr1	stalkie_big_nohaplotig	exon	48091477	48092341	98	+	.	Parent=FBgn0036226.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48091478	48092341	.	+	0	Parent=FBgn0036226.1.mrna1
Chr1	gffcl	locus	48093052	48093902	.	+	.	ID=RLOC_00007692;geneIDs=comp152902_c0_seq1.path1;transcripts=comp152902_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48093052	48093902	.	+	.	ID=comp152902_c0_seq1.mrna1;geneID=comp152902_c0_seq1.path1;Name=comp152902_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=850;mismatches=1;indels=0;unknowns=0;Target=comp152902_c0_seq1 851 1 .;CDS_Target=comp152902_c0_seq1 851 711 .;locus=RLOC_00007692
Chr1	stalkie_big_nohaplotig	exon	48093052	48093902	99	+	.	Parent=comp152902_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48093762	48093902	.	+	0	Parent=comp152902_c0_seq1.mrna1
Chr1	gffcl	locus	48096740	48097219	.	+	.	ID=RLOC_00007693;geneIDs=comp92401_c0_seq1.path1;transcripts=comp92401_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48096740	48097219	.	+	.	ID=comp92401_c0_seq1.mrna1;geneID=comp92401_c0_seq1.path1;Name=comp92401_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=421;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007693
Chr1	stalkie_big_nohaplotig	exon	48096740	48096780	100	+	.	Parent=comp92401_c0_seq1.mrna1;Target=comp92401_c0_seq1 1 41 +
Chr1	stalkie_big_nohaplotig	exon	48096840	48097219	100	+	.	Parent=comp92401_c0_seq1.mrna1;Target=comp92401_c0_seq1 42 421 +
Chr1	stalkie_big_nohaplotig	CDS	48096771	48096780	.	+	0	Parent=comp92401_c0_seq1.mrna1;Target=comp92401_c0_seq1 32 41 +
Chr1	stalkie_big_nohaplotig	CDS	48096840	48097219	.	+	2	Parent=comp92401_c0_seq1.mrna1;Target=comp92401_c0_seq1 42 421 +
Chr1	gffcl	locus	48097622	48098455	.	+	.	ID=RLOC_00007694;geneIDs=FBgn0036227.path1;transcripts=FBgn0036227.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48097622	48098455	.	+	.	ID=FBgn0036227.mrna1;geneID=FBgn0036227.path1;Name=FBgn0036227;Dir=indeterminatecoverage=100.0;identity=100.0;matches=834;mismatches=0;indels=0;unknowns=0;Target=FBgn0036227 834 1 .;locus=RLOC_00007694
Chr1	stalkie_big_nohaplotig	exon	48097622	48098455	100	+	.	Parent=FBgn0036227.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48097622	48098455	.	+	0	Parent=FBgn0036227.mrna1
Chr1	gffcl	locus	48099775	48100882	.	+	.	ID=RLOC_00007695;geneIDs=comp147346_c0_seq1.path1;transcripts=comp147346_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48099775	48100882	.	+	.	ID=comp147346_c0_seq1.mrna1;geneID=comp147346_c0_seq1.path1;Name=comp147346_c0_seq1;Dir=sensecoverage=99.8;identity=99.4;matches=989;mismatches=6;indels=0;unknowns=0;Target=comp147346_c0_seq1 363 530 +;locus=RLOC_00007695
Chr1	stalkie_big_nohaplotig	exon	48099775	48099870	100	+	.	Parent=comp147346_c0_seq1.mrna1;Target=comp147346_c0_seq1 1 96 +
Chr1	stalkie_big_nohaplotig	exon	48099929	48100684	99	+	.	Parent=comp147346_c0_seq1.mrna1;Target=comp147346_c0_seq1 97 852 +
Chr1	stalkie_big_nohaplotig	exon	48100740	48100882	100	+	.	Parent=comp147346_c0_seq1.mrna1;Target=comp147346_c0_seq1 853 995 +
Chr1	stalkie_big_nohaplotig	CDS	48100195	48100362	.	+	0	Parent=comp147346_c0_seq1.mrna1
Chr1	gffcl	locus	48101751	48102815	.	-	.	ID=RLOC_00007696;geneIDs=ORF1781.path1;transcripts=ORF1781.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48101751	48102815	.	-	.	ID=ORF1781.mrna1;geneID=ORF1781.path1;Name=ORF1781;Dir=indeterminatecoverage=100.0;identity=97.4;matches=970;mismatches=26;indels=0;unknowns=0;locus=RLOC_00007696
Chr1	stalkie_big_nohaplotig	exon	48101751	48102469	99	-	.	Parent=ORF1781.mrna1;Target=ORF1781 996 278 .
Chr1	stalkie_big_nohaplotig	exon	48102539	48102815	90	-	.	Parent=ORF1781.mrna1;Target=ORF1781 277 1 .
Chr1	stalkie_big_nohaplotig	CDS	48101751	48102469	.	-	2	Parent=ORF1781.mrna1;Target=ORF1781 996 278 .
Chr1	stalkie_big_nohaplotig	CDS	48102539	48102815	.	-	0	Parent=ORF1781.mrna1;Target=ORF1781 277 1 .
Chr1	gffcl	locus	48107719	48111093	.	-	.	ID=RLOC_00007697;geneIDs=FBgn0036228.1.path1;transcripts=FBgn0036228.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48107719	48111093	.	-	.	ID=FBgn0036228.1.mrna1;geneID=FBgn0036228.1.path1;Name=FBgn0036228.1;Dir=sensecoverage=100.0;identity=99.9;matches=830;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007697
Chr1	stalkie_big_nohaplotig	exon	48107719	48108477	99	-	.	Parent=FBgn0036228.1.mrna1;Target=FBgn0036228.1 73 831 +
Chr1	stalkie_big_nohaplotig	exon	48111022	48111093	100	-	.	Parent=FBgn0036228.1.mrna1;Target=FBgn0036228.1 1 72 +
Chr1	stalkie_big_nohaplotig	CDS	48107719	48108477	.	-	0	Parent=FBgn0036228.1.mrna1;Target=FBgn0036228.1 73 831 +
Chr1	stalkie_big_nohaplotig	CDS	48111022	48111093	.	-	0	Parent=FBgn0036228.1.mrna1;Target=FBgn0036228.1 1 72 +
Chr1	gffcl	locus	48115854	48116453	.	+	.	ID=RLOC_00007698;geneIDs=comp154270_c0_seq1.path1;transcripts=comp154270_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48115854	48116453	.	+	.	ID=comp154270_c0_seq1.mrna1;geneID=comp154270_c0_seq1.path1;Name=comp154270_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=596;mismatches=4;indels=0;unknowns=0;Target=comp154270_c0_seq1 600 1 .;CDS_Target=comp154270_c0_seq1 172 2 .;locus=RLOC_00007698
Chr1	stalkie_big_nohaplotig	exon	48115854	48116453	99	+	.	Parent=comp154270_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48115855	48116025	.	+	0	Parent=comp154270_c0_seq1.mrna1
Chr1	gffcl	locus	48159515	48162413	.	+	.	ID=RLOC_00007700;geneIDs=Dv_FBgn0201126.1.path1,comp151607_c1_seq1.path1;transcripts=comp151607_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48159515	48162413	.	+	.	ID=comp151607_c1_seq1.mrna1;geneID=comp151607_c1_seq1.path1;Name=comp151607_c1_seq1;Dir=antisensecoverage=94.9;identity=100.0;matches=940;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007700
Chr1	stalkie_big_nohaplotig	exon	48159515	48159575	100	+	.	Parent=comp151607_c1_seq1.mrna1;Target=comp151607_c1_seq1 900 960 -
Chr1	stalkie_big_nohaplotig	exon	48161463	48161542	100	+	.	Parent=comp151607_c1_seq1.mrna1;Target=comp151607_c1_seq1 820 899 -
Chr1	stalkie_big_nohaplotig	exon	48161615	48162413	100	+	.	Parent=comp151607_c1_seq1.mrna1;Target=comp151607_c1_seq1 21 819 -
Chr1	stalkie_big_nohaplotig	CDS	48159557	48159575	.	+	0	Parent=comp151607_c1_seq1.mrna1;Target=comp151607_c1_seq1 900 918 .
Chr1	stalkie_big_nohaplotig	CDS	48161463	48161542	.	+	2	Parent=comp151607_c1_seq1.mrna1;Target=comp151607_c1_seq1 820 899 .
Chr1	stalkie_big_nohaplotig	CDS	48161615	48162343	.	+	0	Parent=comp151607_c1_seq1.mrna1;Target=comp151607_c1_seq1 91 819 .
Chr1	gffcl	locus	48163517	48164470	.	-	.	ID=RLOC_00007701;geneIDs=comp154711_c0_seq1.path1;transcripts=comp154711_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48163517	48164470	.	-	.	ID=comp154711_c0_seq1.mrna1;geneID=comp154711_c0_seq1.path1;Name=comp154711_c0_seq1;Dir=antisensecoverage=100.0;identity=98.3;matches=797;mismatches=14;indels=0;unknowns=0;locus=RLOC_00007701
Chr1	stalkie_big_nohaplotig	exon	48163517	48164225	98	-	.	Parent=comp154711_c0_seq1.mrna1;Target=comp154711_c0_seq1 1 709 -
Chr1	stalkie_big_nohaplotig	exon	48164303	48164358	96	-	.	Parent=comp154711_c0_seq1.mrna1;Target=comp154711_c0_seq1 710 765 -
Chr1	stalkie_big_nohaplotig	exon	48164425	48164470	97	-	.	Parent=comp154711_c0_seq1.mrna1;Target=comp154711_c0_seq1 766 811 -
Chr1	stalkie_big_nohaplotig	CDS	48163557	48164225	.	-	0	Parent=comp154711_c0_seq1.mrna1;Target=comp154711_c0_seq1 41 709 .
Chr1	stalkie_big_nohaplotig	CDS	48164303	48164358	.	-	2	Parent=comp154711_c0_seq1.mrna1;Target=comp154711_c0_seq1 710 765 .
Chr1	stalkie_big_nohaplotig	CDS	48164425	48164431	.	-	0	Parent=comp154711_c0_seq1.mrna1;Target=comp154711_c0_seq1 766 772 .
Chr1	gffcl	locus	48164735	48165661	.	-	.	ID=RLOC_00007702;geneIDs=FBgn0053265.path1;transcripts=FBgn0053265.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48164735	48165661	.	-	.	ID=FBgn0053265.mrna1;geneID=FBgn0053265.path1;Name=FBgn0053265;Dir=indeterminatecoverage=100.0;identity=99.6;matches=923;mismatches=4;indels=0;unknowns=0;Target=FBgn0053265 927 1 .;locus=RLOC_00007702
Chr1	stalkie_big_nohaplotig	exon	48164735	48165661	99	-	.	Parent=FBgn0053265.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48164735	48165661	.	-	0	Parent=FBgn0053265.mrna1
Chr1	gffcl	locus	48168677	48169028	.	+	.	ID=RLOC_00007703;geneIDs=comp161574_c1_seq1.path1;transcripts=comp161574_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48168677	48169028	.	+	.	ID=comp161574_c1_seq1.mrna1;geneID=comp161574_c1_seq1.path1;Name=comp161574_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=343;mismatches=9;indels=0;unknowns=0;Target=comp161574_c1_seq1 352 1 .;CDS_Target=comp161574_c1_seq1 283 2 .;locus=RLOC_00007703
Chr1	stalkie_big_nohaplotig	exon	48168677	48169028	97	+	.	Parent=comp161574_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48168678	48168959	.	+	0	Parent=comp161574_c1_seq1.mrna1
Chr1	gffcl	locus	48177322	48178527	.	-	.	ID=RLOC_00007704;geneIDs=comp115984_c0_seq1.path1;transcripts=comp115984_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48177322	48178527	.	-	.	ID=comp115984_c0_seq1.mrna1;geneID=comp115984_c0_seq1.path1;Name=comp115984_c0_seq1;Dir=sensecoverage=99.7;identity=99.3;matches=1063;mismatches=7;indels=0;unknowns=0;locus=RLOC_00007704
Chr1	stalkie_big_nohaplotig	exon	48177322	48177948	100	-	.	Parent=comp115984_c0_seq1.mrna1;Target=comp115984_c0_seq1 447 1073 +
Chr1	stalkie_big_nohaplotig	exon	48178018	48178126	100	-	.	Parent=comp115984_c0_seq1.mrna1;Target=comp115984_c0_seq1 338 446 +
Chr1	stalkie_big_nohaplotig	exon	48178194	48178527	97	-	.	Parent=comp115984_c0_seq1.mrna1;Target=comp115984_c0_seq1 4 337 +
Chr1	stalkie_big_nohaplotig	CDS	48177323	48177948	.	-	2	Parent=comp115984_c0_seq1.mrna1;Target=comp115984_c0_seq1 447 1072 +
Chr1	stalkie_big_nohaplotig	CDS	48178018	48178024	.	-	0	Parent=comp115984_c0_seq1.mrna1;Target=comp115984_c0_seq1 440 446 +
Chr1	gffcl	locus	48179072	48179442	.	+	.	ID=RLOC_00007705;geneIDs=comp115915_c0_seq1.path1;transcripts=comp115915_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48179072	48179442	.	+	.	ID=comp115915_c0_seq1.mrna1;geneID=comp115915_c0_seq1.path1;Name=comp115915_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=371;mismatches=0;indels=0;unknowns=0;Target=comp115915_c0_seq1 371 1 .;CDS_Target=comp115915_c0_seq1 148 83 .;locus=RLOC_00007705
Chr1	stalkie_big_nohaplotig	exon	48179072	48179442	100	+	.	Parent=comp115915_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48179154	48179219	.	+	0	Parent=comp115915_c0_seq1.mrna1
Chr1	gffcl	locus	48185020	48185932	.	-	.	ID=RLOC_00007706;geneIDs=ORF1986.path1;transcripts=ORF1986.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48185020	48185932	.	-	.	ID=ORF1986.mrna1;geneID=ORF1986.path1;Name=ORF1986;Dir=indeterminatecoverage=98.2;identity=97.8;matches=908;mismatches=5;indels=15;unknowns=0;Target=ORF1986 935 8 .;CDS_Target=ORF1986 933 10 .;locus=RLOC_00007706
Chr1	stalkie_big_nohaplotig	exon	48185020	48185932	97	-	.	Parent=ORF1986.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48185022	48185930	.	-	0	Parent=ORF1986.mrna1
Chr1	gffcl	locus	48190853	48199700	.	+	.	ID=RLOC_00007707;geneIDs=FBgn0264488.1.path1;transcripts=FBgn0264488.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48190853	48199700	.	+	.	ID=FBgn0264488.1.mrna1;geneID=FBgn0264488.1.path1;Name=FBgn0264488.1;Dir=sensecoverage=100.0;identity=99.5;matches=5364;mismatches=28;indels=0;unknowns=0;locus=RLOC_00007707
Chr1	stalkie_big_nohaplotig	exon	48190853	48192052	99	+	.	Parent=FBgn0264488.1.mrna1;Target=FBgn0264488.1 1 1200 +
Chr1	stalkie_big_nohaplotig	exon	48192124	48192288	99	+	.	Parent=FBgn0264488.1.mrna1;Target=FBgn0264488.1 1201 1365 +
Chr1	stalkie_big_nohaplotig	exon	48192343	48192522	98	+	.	Parent=FBgn0264488.1.mrna1;Target=FBgn0264488.1 1366 1545 +
Chr1	stalkie_big_nohaplotig	exon	48192592	48192759	100	+	.	Parent=FBgn0264488.1.mrna1;Target=FBgn0264488.1 1546 1713 +
Chr1	stalkie_big_nohaplotig	exon	48193811	48193972	100	+	.	Parent=FBgn0264488.1.mrna1;Target=FBgn0264488.1 1714 1875 +
Chr1	stalkie_big_nohaplotig	exon	48194035	48194205	99	+	.	Parent=FBgn0264488.1.mrna1;Target=FBgn0264488.1 1876 2046 +
Chr1	stalkie_big_nohaplotig	exon	48194279	48194866	99	+	.	Parent=FBgn0264488.1.mrna1;Target=FBgn0264488.1 2047 2634 +
Chr1	stalkie_big_nohaplotig	exon	48196884	48199523	99	+	.	Parent=FBgn0264488.1.mrna1;Target=FBgn0264488.1 2635 5274 +
Chr1	stalkie_big_nohaplotig	exon	48199583	48199700	99	+	.	Parent=FBgn0264488.1.mrna1;Target=FBgn0264488.1 5275 5392 +
Chr1	stalkie_big_nohaplotig	CDS	48190853	48192052	.	+	0	Parent=FBgn0264488.1.mrna1;Target=FBgn0264488.1 1 1200 +
Chr1	stalkie_big_nohaplotig	CDS	48192124	48192288	.	+	0	Parent=FBgn0264488.1.mrna1;Target=FBgn0264488.1 1201 1365 +
Chr1	stalkie_big_nohaplotig	CDS	48192343	48192522	.	+	0	Parent=FBgn0264488.1.mrna1;Target=FBgn0264488.1 1366 1545 +
Chr1	stalkie_big_nohaplotig	CDS	48192592	48192759	.	+	0	Parent=FBgn0264488.1.mrna1;Target=FBgn0264488.1 1546 1713 +
Chr1	stalkie_big_nohaplotig	CDS	48193811	48193972	.	+	0	Parent=FBgn0264488.1.mrna1;Target=FBgn0264488.1 1714 1875 +
Chr1	stalkie_big_nohaplotig	CDS	48194035	48194205	.	+	0	Parent=FBgn0264488.1.mrna1;Target=FBgn0264488.1 1876 2046 +
Chr1	stalkie_big_nohaplotig	CDS	48194279	48194866	.	+	0	Parent=FBgn0264488.1.mrna1;Target=FBgn0264488.1 2047 2634 +
Chr1	stalkie_big_nohaplotig	CDS	48196884	48199523	.	+	0	Parent=FBgn0264488.1.mrna1;Target=FBgn0264488.1 2635 5274 +
Chr1	stalkie_big_nohaplotig	CDS	48199583	48199699	.	+	0	Parent=FBgn0264488.1.mrna1;Target=FBgn0264488.1 5275 5391 +
Chr1	gffcl	locus	48221067	48222418	.	+	.	ID=RLOC_00007708;geneIDs=FBgn0036235.path1;transcripts=FBgn0036235.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48221067	48222418	.	+	.	ID=FBgn0036235.mrna1;geneID=FBgn0036235.path1;Name=FBgn0036235;Dir=sensecoverage=100.0;identity=99.9;matches=1052;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007708
Chr1	stalkie_big_nohaplotig	exon	48221067	48221292	100	+	.	Parent=FBgn0036235.mrna1;Target=FBgn0036235 1 226 +
Chr1	stalkie_big_nohaplotig	exon	48221356	48221749	100	+	.	Parent=FBgn0036235.mrna1;Target=FBgn0036235 227 620 +
Chr1	stalkie_big_nohaplotig	exon	48221814	48221904	100	+	.	Parent=FBgn0036235.mrna1;Target=FBgn0036235 621 711 +
Chr1	stalkie_big_nohaplotig	exon	48222077	48222418	99	+	.	Parent=FBgn0036235.mrna1;Target=FBgn0036235 712 1053 +
Chr1	stalkie_big_nohaplotig	CDS	48221067	48221292	.	+	0	Parent=FBgn0036235.mrna1;Target=FBgn0036235 1 226 +
Chr1	stalkie_big_nohaplotig	CDS	48221356	48221749	.	+	2	Parent=FBgn0036235.mrna1;Target=FBgn0036235 227 620 +
Chr1	stalkie_big_nohaplotig	CDS	48221814	48221904	.	+	1	Parent=FBgn0036235.mrna1;Target=FBgn0036235 621 711 +
Chr1	stalkie_big_nohaplotig	CDS	48222077	48222418	.	+	0	Parent=FBgn0036235.mrna1;Target=FBgn0036235 712 1053 +
Chr1	gffcl	locus	48224099	48226229	.	+	.	ID=RLOC_00007709;geneIDs=FBgn0036236.1.path1,comp159886_c0_seq1.path1;transcripts=FBgn0036236.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48224099	48225398	.	+	.	ID=FBgn0036236.1.mrna1;geneID=FBgn0036236.1.path1;Name=FBgn0036236.1;Dir=sensecoverage=100.0;identity=99.4;matches=843;mismatches=5;indels=0;unknowns=1;locus=RLOC_00007709
Chr1	stalkie_big_nohaplotig	exon	48224099	48224183	100	+	.	Parent=FBgn0036236.1.mrna1;Target=FBgn0036236.1 1 85 +
Chr1	stalkie_big_nohaplotig	exon	48224252	48224419	99	+	.	Parent=FBgn0036236.1.mrna1;Target=FBgn0036236.1 86 253 +
Chr1	stalkie_big_nohaplotig	exon	48224677	48224900	99	+	.	Parent=FBgn0036236.1.mrna1;Target=FBgn0036236.1 254 477 +
Chr1	stalkie_big_nohaplotig	exon	48224961	48225146	99	+	.	Parent=FBgn0036236.1.mrna1;Target=FBgn0036236.1 478 663 +
Chr1	stalkie_big_nohaplotig	exon	48225213	48225398	98	+	.	Parent=FBgn0036236.1.mrna1;Target=FBgn0036236.1 664 849 +
Chr1	stalkie_big_nohaplotig	CDS	48224099	48224183	.	+	0	Parent=FBgn0036236.1.mrna1;Target=FBgn0036236.1 1 85 +
Chr1	stalkie_big_nohaplotig	CDS	48224252	48224419	.	+	2	Parent=FBgn0036236.1.mrna1;Target=FBgn0036236.1 86 253 +
Chr1	stalkie_big_nohaplotig	CDS	48224677	48224900	.	+	2	Parent=FBgn0036236.1.mrna1;Target=FBgn0036236.1 254 477 +
Chr1	stalkie_big_nohaplotig	CDS	48224961	48225146	.	+	0	Parent=FBgn0036236.1.mrna1;Target=FBgn0036236.1 478 663 +
Chr1	stalkie_big_nohaplotig	CDS	48225213	48225398	.	+	0	Parent=FBgn0036236.1.mrna1;Target=FBgn0036236.1 664 849 +
Chr1	gffcl	locus	48225525	48226430	.	-	.	ID=RLOC_00007710;geneIDs=FBgn0036237.1.path1;transcripts=FBgn0036237.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48225525	48226430	.	-	.	ID=FBgn0036237.1.mrna1;geneID=FBgn0036237.1.path1;Name=FBgn0036237.1;Dir=sensecoverage=100.0;identity=100.0;matches=765;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007710
Chr1	stalkie_big_nohaplotig	exon	48225525	48226235	100	-	.	Parent=FBgn0036237.1.mrna1;Target=FBgn0036237.1 55 765 +
Chr1	stalkie_big_nohaplotig	exon	48226377	48226430	100	-	.	Parent=FBgn0036237.1.mrna1;Target=FBgn0036237.1 1 54 +
Chr1	stalkie_big_nohaplotig	CDS	48225525	48226235	.	-	0	Parent=FBgn0036237.1.mrna1;Target=FBgn0036237.1 55 765 +
Chr1	stalkie_big_nohaplotig	CDS	48226377	48226430	.	-	0	Parent=FBgn0036237.1.mrna1;Target=FBgn0036237.1 1 54 +
Chr1	gffcl	locus	48228861	48229979	.	-	.	ID=RLOC_00007711;geneIDs=comp153401_c0_seq1.path1;transcripts=comp153401_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48228861	48229979	.	-	.	ID=comp153401_c0_seq1.mrna1;geneID=comp153401_c0_seq1.path1;Name=comp153401_c0_seq1;Dir=indeterminatecoverage=99.8;identity=96.5;matches=1088;mismatches=24;indels=16;unknowns=0;Target=comp153401_c0_seq1 1121 1 .;CDS_Target=comp153401_c0_seq1 31 2 .;locus=RLOC_00007711
Chr1	stalkie_big_nohaplotig	exon	48228861	48229979	96	-	.	Parent=comp153401_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48229942	48229978	.	-	0	Parent=comp153401_c0_seq1.mrna1
Chr1	gffcl	locus	48230263	48230751	.	-	.	ID=RLOC_00007712;geneIDs=FBgn0061515.1.path1;transcripts=FBgn0061515.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48230263	48230751	.	-	.	ID=FBgn0061515.1.mrna1;geneID=FBgn0061515.1.path1;Name=FBgn0061515.1;Dir=sensecoverage=100.0;identity=100.0;matches=366;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007712
Chr1	stalkie_big_nohaplotig	exon	48230263	48230433	100	-	.	Parent=FBgn0061515.1.mrna1;Target=FBgn0061515.1 196 366 +
Chr1	stalkie_big_nohaplotig	exon	48230490	48230606	100	-	.	Parent=FBgn0061515.1.mrna1;Target=FBgn0061515.1 79 195 +
Chr1	stalkie_big_nohaplotig	exon	48230674	48230751	100	-	.	Parent=FBgn0061515.1.mrna1;Target=FBgn0061515.1 1 78 +
Chr1	stalkie_big_nohaplotig	CDS	48230263	48230433	.	-	0	Parent=FBgn0061515.1.mrna1;Target=FBgn0061515.1 196 366 +
Chr1	stalkie_big_nohaplotig	CDS	48230490	48230606	.	-	0	Parent=FBgn0061515.1.mrna1;Target=FBgn0061515.1 79 195 +
Chr1	stalkie_big_nohaplotig	CDS	48230674	48230751	.	-	0	Parent=FBgn0061515.1.mrna1;Target=FBgn0061515.1 1 78 +
Chr1	gffcl	locus	48230761	48231124	.	+	.	ID=RLOC_00007713;geneIDs=comp504565_c0_seq1.path1;transcripts=comp504565_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48230761	48231124	.	+	.	ID=comp504565_c0_seq1.mrna1;geneID=comp504565_c0_seq1.path1;Name=comp504565_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=364;mismatches=0;indels=0;unknowns=0;Target=comp504565_c0_seq1 364 1 .;CDS_Target=comp504565_c0_seq1 75 1 .;locus=RLOC_00007713
Chr1	stalkie_big_nohaplotig	exon	48230761	48231124	100	+	.	Parent=comp504565_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48230761	48230835	.	+	0	Parent=comp504565_c0_seq1.mrna1
Chr1	gffcl	locus	48234444	48235673	.	+	.	ID=RLOC_00007714;geneIDs=comp153993_c0_seq1.path1;transcripts=comp153993_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48234444	48235673	.	+	.	ID=comp153993_c0_seq1.mrna1;geneID=comp153993_c0_seq1.path1;Name=comp153993_c0_seq1;Dir=antisensecoverage=98.0;identity=98.0;matches=1152;mismatches=18;indels=6;unknowns=0;locus=RLOC_00007714
Chr1	stalkie_big_nohaplotig	exon	48234444	48235196	97	+	.	Parent=comp153993_c0_seq1.mrna1;Target=comp153993_c0_seq1 421 1179 -
Chr1	stalkie_big_nohaplotig	exon	48235257	48235673	98	+	.	Parent=comp153993_c0_seq1.mrna1;Target=comp153993_c0_seq1 4 420 -
Chr1	stalkie_big_nohaplotig	CDS	48234848	48235196	.	+	0	Parent=comp153993_c0_seq1.mrna1;Target=comp153993_c0_seq1 421 769 .
Chr1	stalkie_big_nohaplotig	CDS	48235257	48235570	.	+	2	Parent=comp153993_c0_seq1.mrna1;Target=comp153993_c0_seq1 107 420 .
Chr1	gffcl	locus	48239298	48256043	.	+	.	ID=RLOC_00007715;geneIDs=FBgn0005198.1.path1;transcripts=FBgn0005198.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48239298	48256043	.	+	.	ID=FBgn0005198.1.mrna1;geneID=FBgn0005198.1.path1;Name=FBgn0005198.1;Dir=sensecoverage=100.0;identity=99.7;matches=4537;mismatches=13;indels=1;unknowns=0;locus=RLOC_00007715
Chr1	stalkie_big_nohaplotig	exon	48239298	48239364	100	+	.	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 1 67 +
Chr1	stalkie_big_nohaplotig	exon	48239512	48239642	99	+	.	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 68 198 +
Chr1	stalkie_big_nohaplotig	exon	48239704	48239862	100	+	.	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 199 357 +
Chr1	stalkie_big_nohaplotig	exon	48239930	48240022	100	+	.	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 358 450 +
Chr1	stalkie_big_nohaplotig	exon	48240075	48240211	98	+	.	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 451 587 +
Chr1	stalkie_big_nohaplotig	exon	48240565	48240739	100	+	.	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 588 762 +
Chr1	stalkie_big_nohaplotig	exon	48250777	48250983	100	+	.	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 763 969 +
Chr1	stalkie_big_nohaplotig	exon	48251071	48251221	100	+	.	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 970 1120 +
Chr1	stalkie_big_nohaplotig	exon	48251275	48252017	99	+	.	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 1121 1863 +
Chr1	stalkie_big_nohaplotig	exon	48252080	48252344	100	+	.	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 1864 2128 +
Chr1	stalkie_big_nohaplotig	exon	48252422	48252847	100	+	.	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 2129 2554 +
Chr1	stalkie_big_nohaplotig	exon	48253709	48253908	100	+	.	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 2555 2754 +
Chr1	stalkie_big_nohaplotig	exon	48253965	48254236	99	+	.	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 2755 3026 +
Chr1	stalkie_big_nohaplotig	exon	48254458	48254638	100	+	.	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 3027 3207 +
Chr1	stalkie_big_nohaplotig	exon	48254701	48256043	99	+	.	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 3208 4551 +
Chr1	stalkie_big_nohaplotig	CDS	48239298	48239364	.	+	0	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 1 67 +
Chr1	stalkie_big_nohaplotig	CDS	48239512	48239642	.	+	2	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 68 198 +
Chr1	stalkie_big_nohaplotig	CDS	48239704	48239862	.	+	0	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 199 357 +
Chr1	stalkie_big_nohaplotig	CDS	48239930	48240022	.	+	0	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 358 450 +
Chr1	stalkie_big_nohaplotig	CDS	48240075	48240211	.	+	0	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 451 587 +
Chr1	stalkie_big_nohaplotig	CDS	48240565	48240739	.	+	1	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 588 762 +
Chr1	stalkie_big_nohaplotig	CDS	48250777	48250983	.	+	0	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 763 969 +
Chr1	stalkie_big_nohaplotig	CDS	48251071	48251221	.	+	0	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 970 1120 +
Chr1	stalkie_big_nohaplotig	CDS	48251275	48252017	.	+	2	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 1121 1863 +
Chr1	stalkie_big_nohaplotig	CDS	48252080	48252344	.	+	0	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 1864 2128 +
Chr1	stalkie_big_nohaplotig	CDS	48252422	48252847	.	+	2	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 2129 2554 +
Chr1	stalkie_big_nohaplotig	CDS	48253709	48253908	.	+	2	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 2555 2754 +
Chr1	stalkie_big_nohaplotig	CDS	48253965	48254236	.	+	0	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 2755 3026 +
Chr1	stalkie_big_nohaplotig	CDS	48254458	48254638	.	+	1	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 3027 3207 +
Chr1	stalkie_big_nohaplotig	CDS	48254701	48256043	.	+	0	Parent=FBgn0005198.1.mrna1;Target=FBgn0005198.1 3208 4551 +
Chr1	gffcl	locus	48240985	48242210	.	-	.	ID=RLOC_00007716;geneIDs=FBgn0036940.1.path1;transcripts=FBgn0036940.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48240985	48242210	.	-	.	ID=FBgn0036940.1.mrna1;geneID=FBgn0036940.1.path1;Name=FBgn0036940.1;Dir=sensecoverage=100.0;identity=99.8;matches=1072;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007716
Chr1	stalkie_big_nohaplotig	exon	48240985	48241899	99	-	.	Parent=FBgn0036940.1.mrna1;Target=FBgn0036940.1 160 1074 +
Chr1	stalkie_big_nohaplotig	exon	48241984	48242048	100	-	.	Parent=FBgn0036940.1.mrna1;Target=FBgn0036940.1 95 159 +
Chr1	stalkie_big_nohaplotig	exon	48242117	48242210	100	-	.	Parent=FBgn0036940.1.mrna1;Target=FBgn0036940.1 1 94 +
Chr1	stalkie_big_nohaplotig	CDS	48240985	48241899	.	-	0	Parent=FBgn0036940.1.mrna1;Target=FBgn0036940.1 160 1074 +
Chr1	stalkie_big_nohaplotig	CDS	48241984	48242048	.	-	2	Parent=FBgn0036940.1.mrna1;Target=FBgn0036940.1 95 159 +
Chr1	stalkie_big_nohaplotig	CDS	48242117	48242210	.	-	0	Parent=FBgn0036940.1.mrna1;Target=FBgn0036940.1 1 94 +
Chr1	gffcl	locus	48245077	48246147	.	-	.	ID=RLOC_00007717;geneIDs=FBgn0036942.1.path1;transcripts=FBgn0036942.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48245077	48246147	.	-	.	ID=FBgn0036942.1.mrna1;geneID=FBgn0036942.1.path1;Name=FBgn0036942.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1071;mismatches=0;indels=0;unknowns=0;Target=FBgn0036942.1 1071 1 .;locus=RLOC_00007717
Chr1	stalkie_big_nohaplotig	exon	48245077	48246147	100	-	.	Parent=FBgn0036942.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48245077	48246147	.	-	0	Parent=FBgn0036942.1.mrna1
Chr1	gffcl	locus	48259435	48260179	.	+	.	ID=RLOC_00007718;geneIDs=comp155205_c0_seq1.path1;transcripts=comp155205_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48259435	48260179	.	+	.	ID=comp155205_c0_seq1.mrna1;geneID=comp155205_c0_seq1.path1;Name=comp155205_c0_seq1;Dir=indeterminatecoverage=96.3;identity=94.8;matches=709;mismatches=36;indels=3;unknowns=0;Target=comp155205_c0_seq1 777 30 .;CDS_Target=comp155205_c0_seq1 622 617 .;locus=RLOC_00007718
Chr1	stalkie_big_nohaplotig	exon	48259435	48260179	94	+	.	Parent=comp155205_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48260019	48260024	.	+	0	Parent=comp155205_c0_seq1.mrna1
Chr1	gffcl	locus	48268027	48473789	.	-	.	ID=RLOC_00007719;geneIDs=FBgn0261556.1.path1;transcripts=FBgn0261556.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48268027	48473789	.	-	.	ID=FBgn0261556.1.mrna1;geneID=FBgn0261556.1.path1;Name=FBgn0261556.1;Dir=sensecoverage=100.0;identity=99.8;matches=4105;mismatches=8;indels=0;unknowns=0;locus=RLOC_00007719
Chr1	stalkie_big_nohaplotig	exon	48268027	48268390	99	-	.	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 3750 4113 +
Chr1	stalkie_big_nohaplotig	exon	48268478	48268582	100	-	.	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 3645 3749 +
Chr1	stalkie_big_nohaplotig	exon	48268756	48268906	99	-	.	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 3494 3644 +
Chr1	stalkie_big_nohaplotig	exon	48270118	48270757	99	-	.	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 2854 3493 +
Chr1	stalkie_big_nohaplotig	exon	48270818	48270928	100	-	.	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 2743 2853 +
Chr1	stalkie_big_nohaplotig	exon	48271002	48271463	100	-	.	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 2281 2742 +
Chr1	stalkie_big_nohaplotig	exon	48271555	48271929	100	-	.	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 1906 2280 +
Chr1	stalkie_big_nohaplotig	exon	48271998	48272140	99	-	.	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 1763 1905 +
Chr1	stalkie_big_nohaplotig	exon	48272198	48272292	100	-	.	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 1668 1762 +
Chr1	stalkie_big_nohaplotig	exon	48272359	48272453	100	-	.	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 1573 1667 +
Chr1	stalkie_big_nohaplotig	exon	48287582	48287665	100	-	.	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 1489 1572 +
Chr1	stalkie_big_nohaplotig	exon	48472302	48473789	99	-	.	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 1 1488 +
Chr1	stalkie_big_nohaplotig	CDS	48268027	48268390	.	-	1	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 3750 4113 +
Chr1	stalkie_big_nohaplotig	CDS	48268478	48268582	.	-	1	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 3645 3749 +
Chr1	stalkie_big_nohaplotig	CDS	48268756	48268906	.	-	2	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 3494 3644 +
Chr1	stalkie_big_nohaplotig	CDS	48270118	48270757	.	-	0	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 2854 3493 +
Chr1	stalkie_big_nohaplotig	CDS	48270818	48270928	.	-	0	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 2743 2853 +
Chr1	stalkie_big_nohaplotig	CDS	48271002	48271463	.	-	0	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 2281 2742 +
Chr1	stalkie_big_nohaplotig	CDS	48271555	48271929	.	-	0	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 1906 2280 +
Chr1	stalkie_big_nohaplotig	CDS	48271998	48272140	.	-	2	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 1763 1905 +
Chr1	stalkie_big_nohaplotig	CDS	48272198	48272292	.	-	1	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 1668 1762 +
Chr1	stalkie_big_nohaplotig	CDS	48272359	48272453	.	-	0	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 1573 1667 +
Chr1	stalkie_big_nohaplotig	CDS	48287582	48287665	.	-	0	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 1489 1572 +
Chr1	stalkie_big_nohaplotig	CDS	48472302	48473789	.	-	0	Parent=FBgn0261556.1.mrna1;Target=FBgn0261556.1 1 1488 +
Chr1	gffcl	locus	48288303	48288689	.	+	.	ID=RLOC_00007720;geneIDs=comp112790_c0_seq1.path1;transcripts=comp112790_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48288303	48288689	.	+	.	ID=comp112790_c0_seq1.mrna1;geneID=comp112790_c0_seq1.path1;Name=comp112790_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=387;mismatches=0;indels=0;unknowns=0;Target=comp112790_c0_seq1 387 1 .;CDS_Target=comp112790_c0_seq1 287 177 .;locus=RLOC_00007720
Chr1	stalkie_big_nohaplotig	exon	48288303	48288689	100	+	.	Parent=comp112790_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48288479	48288589	.	+	0	Parent=comp112790_c0_seq1.mrna1
Chr1	gffcl	locus	48326094	48326399	.	-	.	ID=RLOC_00007721;geneIDs=Dp_FBgn0244999.path1;transcripts=Dp_FBgn0244999.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48326094	48326399	.	-	.	ID=Dp_FBgn0244999.mrna1;geneID=Dp_FBgn0244999.path1;Name=Dp_FBgn0244999;Dir=indeterminatecoverage=100.0;identity=99.7;matches=305;mismatches=1;indels=0;unknowns=0;Target=Dp_FBgn0244999 306 1 .;locus=RLOC_00007721
Chr1	stalkie_big_nohaplotig	exon	48326094	48326399	99	-	.	Parent=Dp_FBgn0244999.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48326094	48326399	.	-	0	Parent=Dp_FBgn0244999.mrna1
Chr1	gffcl	locus	48334456	48337047	.	-	.	ID=RLOC_00007722;geneIDs=comp150251_c0_seq1.path1;transcripts=comp150251_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48334456	48337047	.	-	.	ID=comp150251_c0_seq1.mrna1;geneID=comp150251_c0_seq1.path1;Name=comp150251_c0_seq1;Dir=sensecoverage=99.9;identity=95.6;matches=995;mismatches=22;indels=24;unknowns=0;Target=comp150251_c0_seq1 120 230 +;locus=RLOC_00007722
Chr1	stalkie_big_nohaplotig	exon	48334456	48335129	96	-	.	Parent=comp150251_c0_seq1.mrna1;Target=comp150251_c0_seq1 389 1055 +
Chr1	stalkie_big_nohaplotig	exon	48336575	48336702	96	-	.	Parent=comp150251_c0_seq1.mrna1;Target=comp150251_c0_seq1 261 388 +
Chr1	stalkie_big_nohaplotig	exon	48336817	48337047	93	-	.	Parent=comp150251_c0_seq1.mrna1;Target=comp150251_c0_seq1 1 230 +
Chr1	stalkie_big_nohaplotig	CDS	48336817	48336928	.	-	0	Parent=comp150251_c0_seq1.mrna1
Chr1	gffcl	locus	48423649	48424899	.	-	.	ID=RLOC_00007723;geneIDs=Dp_FBgn0243606.path6;transcripts=Dp_FBgn0243606.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	48423649	48424899	.	-	.	ID=Dp_FBgn0243606.mrna6;geneID=Dp_FBgn0243606.path6;Name=Dp_FBgn0243606;Dir=indeterminatecoverage=100.0;identity=98.6;matches=1229;mismatches=17;indels=0;unknowns=5;Target=Dp_FBgn0243606 1251 1 .;locus=RLOC_00007723
Chr1	stalkie_big_nohaplotig	exon	48423649	48424899	98	-	.	Parent=Dp_FBgn0243606.mrna6
Chr1	stalkie_big_nohaplotig	CDS	48423649	48424899	.	-	0	Parent=Dp_FBgn0243606.mrna6
Chr1	gffcl	locus	48451676	48454054	.	+	.	ID=RLOC_00007724;geneIDs=ORF858.path1;transcripts=ORF858.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48451676	48454054	.	+	.	ID=ORF858.mrna1;geneID=ORF858.path1;Name=ORF858;Dir=sensecoverage=100.0;identity=99.8;matches=1377;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007724
Chr1	stalkie_big_nohaplotig	exon	48451676	48451764	100	+	.	Parent=ORF858.mrna1;Target=ORF858 1 89 +
Chr1	stalkie_big_nohaplotig	exon	48451825	48451860	100	+	.	Parent=ORF858.mrna1;Target=ORF858 90 125 +
Chr1	stalkie_big_nohaplotig	exon	48451919	48452069	100	+	.	Parent=ORF858.mrna1;Target=ORF858 126 276 +
Chr1	stalkie_big_nohaplotig	exon	48452131	48452252	99	+	.	Parent=ORF858.mrna1;Target=ORF858 277 398 +
Chr1	stalkie_big_nohaplotig	exon	48452312	48452538	99	+	.	Parent=ORF858.mrna1;Target=ORF858 399 625 +
Chr1	stalkie_big_nohaplotig	exon	48453089	48453225	100	+	.	Parent=ORF858.mrna1;Target=ORF858 626 762 +
Chr1	stalkie_big_nohaplotig	exon	48453286	48453461	100	+	.	Parent=ORF858.mrna1;Target=ORF858 763 938 +
Chr1	stalkie_big_nohaplotig	exon	48453520	48453692	99	+	.	Parent=ORF858.mrna1;Target=ORF858 939 1111 +
Chr1	stalkie_big_nohaplotig	exon	48453786	48454054	100	+	.	Parent=ORF858.mrna1;Target=ORF858 1112 1380 +
Chr1	stalkie_big_nohaplotig	CDS	48451676	48451764	.	+	0	Parent=ORF858.mrna1;Target=ORF858 1 89 +
Chr1	stalkie_big_nohaplotig	CDS	48451825	48451860	.	+	1	Parent=ORF858.mrna1;Target=ORF858 90 125 +
Chr1	stalkie_big_nohaplotig	CDS	48451919	48452069	.	+	1	Parent=ORF858.mrna1;Target=ORF858 126 276 +
Chr1	stalkie_big_nohaplotig	CDS	48452131	48452252	.	+	0	Parent=ORF858.mrna1;Target=ORF858 277 398 +
Chr1	stalkie_big_nohaplotig	CDS	48452312	48452538	.	+	1	Parent=ORF858.mrna1;Target=ORF858 399 625 +
Chr1	stalkie_big_nohaplotig	CDS	48453089	48453225	.	+	2	Parent=ORF858.mrna1;Target=ORF858 626 762 +
Chr1	stalkie_big_nohaplotig	CDS	48453286	48453461	.	+	0	Parent=ORF858.mrna1;Target=ORF858 763 938 +
Chr1	stalkie_big_nohaplotig	CDS	48453520	48453692	.	+	1	Parent=ORF858.mrna1;Target=ORF858 939 1111 +
Chr1	stalkie_big_nohaplotig	CDS	48453786	48454054	.	+	2	Parent=ORF858.mrna1;Target=ORF858 1112 1380 +
Chr1	gffcl	locus	48468185	48469528	.	+	.	ID=RLOC_00007725;geneIDs=FBgn0036945.1.path1;transcripts=FBgn0036945.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48468185	48469528	.	+	.	ID=FBgn0036945.1.mrna1;geneID=FBgn0036945.1.path1;Name=FBgn0036945.1;Dir=sensecoverage=100.0;identity=99.8;matches=518;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007725
Chr1	stalkie_big_nohaplotig	exon	48468185	48468259	100	+	.	Parent=FBgn0036945.1.mrna1;Target=FBgn0036945.1 1 75 +
Chr1	stalkie_big_nohaplotig	exon	48469022	48469218	100	+	.	Parent=FBgn0036945.1.mrna1;Target=FBgn0036945.1 76 272 +
Chr1	stalkie_big_nohaplotig	exon	48469282	48469528	99	+	.	Parent=FBgn0036945.1.mrna1;Target=FBgn0036945.1 273 519 +
Chr1	stalkie_big_nohaplotig	CDS	48468185	48468259	.	+	0	Parent=FBgn0036945.1.mrna1;Target=FBgn0036945.1 1 75 +
Chr1	stalkie_big_nohaplotig	CDS	48469022	48469218	.	+	0	Parent=FBgn0036945.1.mrna1;Target=FBgn0036945.1 76 272 +
Chr1	stalkie_big_nohaplotig	CDS	48469282	48469528	.	+	1	Parent=FBgn0036945.1.mrna1;Target=FBgn0036945.1 273 519 +
Chr1	gffcl	locus	48498261	48498609	.	+	.	ID=RLOC_00007726;geneIDs=comp135654_c0_seq1.path1;transcripts=comp135654_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48498261	48498609	.	+	.	ID=comp135654_c0_seq1.mrna1;geneID=comp135654_c0_seq1.path1;Name=comp135654_c0_seq1;Dir=indeterminatecoverage=96.1;identity=99.1;matches=346;mismatches=3;indels=0;unknowns=0;Target=comp135654_c0_seq1 349 1 .;CDS_Target=comp135654_c0_seq1 348 217 .;locus=RLOC_00007726
Chr1	stalkie_big_nohaplotig	exon	48498261	48498609	99	+	.	Parent=comp135654_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48498477	48498608	.	+	0	Parent=comp135654_c0_seq1.mrna1
Chr1	gffcl	locus	48504615	48505432	.	+	.	ID=RLOC_00007727;geneIDs=FBgn0036947.1.path1;transcripts=FBgn0036947.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48504615	48505432	.	+	.	ID=FBgn0036947.1.mrna1;geneID=FBgn0036947.1.path1;Name=FBgn0036947.1;Dir=sensecoverage=100.0;identity=100.0;matches=738;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007727
Chr1	stalkie_big_nohaplotig	exon	48504615	48504692	100	+	.	Parent=FBgn0036947.1.mrna1;Target=FBgn0036947.1 1 78 +
Chr1	stalkie_big_nohaplotig	exon	48504773	48505432	100	+	.	Parent=FBgn0036947.1.mrna1;Target=FBgn0036947.1 79 738 +
Chr1	stalkie_big_nohaplotig	CDS	48504615	48504692	.	+	0	Parent=FBgn0036947.1.mrna1;Target=FBgn0036947.1 1 78 +
Chr1	stalkie_big_nohaplotig	CDS	48504773	48505432	.	+	0	Parent=FBgn0036947.1.mrna1;Target=FBgn0036947.1 79 738 +
Chr1	gffcl	locus	48505804	48506151	.	-	.	ID=RLOC_00007728;geneIDs=comp130359_c0_seq1.path1;transcripts=comp130359_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48505804	48506151	.	-	.	ID=comp130359_c0_seq1.mrna1;geneID=comp130359_c0_seq1.path1;Name=comp130359_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=343;mismatches=5;indels=0;unknowns=0;Target=comp130359_c0_seq1 348 1 .;CDS_Target=comp130359_c0_seq1 348 184 .;locus=RLOC_00007728
Chr1	stalkie_big_nohaplotig	exon	48505804	48506151	98	-	.	Parent=comp130359_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48505804	48505968	.	-	0	Parent=comp130359_c0_seq1.mrna1
Chr1	gffcl	locus	48509113	48510374	.	+	.	ID=RLOC_00007729;geneIDs=FBgn0036952.1.path1;transcripts=FBgn0036952.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48509113	48510374	.	+	.	ID=FBgn0036952.1.mrna1;geneID=FBgn0036952.1.path1;Name=FBgn0036952.1;Dir=sensecoverage=100.0;identity=99.9;matches=1148;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007729
Chr1	stalkie_big_nohaplotig	exon	48509113	48509242	99	+	.	Parent=FBgn0036952.1.mrna1;Target=FBgn0036952.1 1 130 +
Chr1	stalkie_big_nohaplotig	exon	48509356	48510374	100	+	.	Parent=FBgn0036952.1.mrna1;Target=FBgn0036952.1 131 1149 +
Chr1	stalkie_big_nohaplotig	CDS	48509113	48509242	.	+	0	Parent=FBgn0036952.1.mrna1;Target=FBgn0036952.1 1 130 +
Chr1	stalkie_big_nohaplotig	CDS	48509356	48510374	.	+	2	Parent=FBgn0036952.1.mrna1;Target=FBgn0036952.1 131 1149 +
Chr1	gffcl	locus	48514174	48515560	.	+	.	ID=RLOC_00007730;geneIDs=FBgn0036951.1.path1;transcripts=FBgn0036951.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48514174	48515560	.	+	.	ID=FBgn0036951.1.mrna1;geneID=FBgn0036951.1.path1;Name=FBgn0036951.1;Dir=sensecoverage=100.0;identity=100.0;matches=1116;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007730
Chr1	stalkie_big_nohaplotig	exon	48514174	48514234	100	+	.	Parent=FBgn0036951.1.mrna1;Target=FBgn0036951.1 1 61 +
Chr1	stalkie_big_nohaplotig	exon	48514506	48515560	100	+	.	Parent=FBgn0036951.1.mrna1;Target=FBgn0036951.1 62 1116 +
Chr1	stalkie_big_nohaplotig	CDS	48514174	48514234	.	+	0	Parent=FBgn0036951.1.mrna1;Target=FBgn0036951.1 1 61 +
Chr1	stalkie_big_nohaplotig	CDS	48514506	48515560	.	+	2	Parent=FBgn0036951.1.mrna1;Target=FBgn0036951.1 62 1116 +
Chr1	gffcl	locus	48526601	48527851	.	-	.	ID=RLOC_00007731;geneIDs=Dp_FBgn0243606.path7;transcripts=Dp_FBgn0243606.mrna7
Chr1	stalkie_big_nohaplotig	mRNA	48526601	48527851	.	-	.	ID=Dp_FBgn0243606.mrna7;geneID=Dp_FBgn0243606.path7;Name=Dp_FBgn0243606;Dir=indeterminatecoverage=100.0;identity=98.6;matches=1229;mismatches=17;indels=0;unknowns=5;Target=Dp_FBgn0243606 1251 1 .;locus=RLOC_00007731
Chr1	stalkie_big_nohaplotig	exon	48526601	48527851	98	-	.	Parent=Dp_FBgn0243606.mrna7
Chr1	stalkie_big_nohaplotig	CDS	48526601	48527851	.	-	0	Parent=Dp_FBgn0243606.mrna7
Chr1	gffcl	locus	48530433	48531819	.	+	.	ID=RLOC_00007732;geneIDs=FBgn0036951.1.path2;transcripts=FBgn0036951.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	48530433	48531819	.	+	.	ID=FBgn0036951.1.mrna2;geneID=FBgn0036951.1.path2;Name=FBgn0036951.1;Dir=sensecoverage=100.0;identity=100.0;matches=1116;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007732
Chr1	stalkie_big_nohaplotig	exon	48530433	48530493	100	+	.	Parent=FBgn0036951.1.mrna2;Target=FBgn0036951.1 1 61 +
Chr1	stalkie_big_nohaplotig	exon	48530765	48531819	100	+	.	Parent=FBgn0036951.1.mrna2;Target=FBgn0036951.1 62 1116 +
Chr1	stalkie_big_nohaplotig	CDS	48530433	48530493	.	+	0	Parent=FBgn0036951.1.mrna2;Target=FBgn0036951.1 1 61 +
Chr1	stalkie_big_nohaplotig	CDS	48530765	48531819	.	+	2	Parent=FBgn0036951.1.mrna2;Target=FBgn0036951.1 62 1116 +
Chr1	gffcl	locus	48535296	48536810	.	-	.	ID=RLOC_00007733;geneIDs=FBgn0036950.1.path1;transcripts=FBgn0036950.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48535296	48536810	.	-	.	ID=FBgn0036950.1.mrna1;geneID=FBgn0036950.1.path1;Name=FBgn0036950.1;Dir=sensecoverage=100.0;identity=99.5;matches=1081;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007733
Chr1	stalkie_big_nohaplotig	exon	48535296	48536362	99	-	.	Parent=FBgn0036950.1.mrna1;Target=FBgn0036950.1 20 1086 +
Chr1	stalkie_big_nohaplotig	exon	48536792	48536810	100	-	.	Parent=FBgn0036950.1.mrna1;Target=FBgn0036950.1 1 19 +
Chr1	stalkie_big_nohaplotig	CDS	48535296	48536362	.	-	2	Parent=FBgn0036950.1.mrna1;Target=FBgn0036950.1 20 1086 +
Chr1	stalkie_big_nohaplotig	CDS	48536792	48536810	.	-	0	Parent=FBgn0036950.1.mrna1;Target=FBgn0036950.1 1 19 +
Chr1	gffcl	locus	48542572	48544108	.	+	.	ID=RLOC_00007734;geneIDs=FBgn0036949.1.path1;transcripts=FBgn0036949.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48542572	48544108	.	+	.	ID=FBgn0036949.1.mrna1;geneID=FBgn0036949.1.path1;Name=FBgn0036949.1;Dir=sensecoverage=100.0;identity=99.9;matches=1328;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007734
Chr1	stalkie_big_nohaplotig	exon	48542572	48542623	100	+	.	Parent=FBgn0036949.1.mrna1;Target=FBgn0036949.1 1 52 +
Chr1	stalkie_big_nohaplotig	exon	48542759	48543396	99	+	.	Parent=FBgn0036949.1.mrna1;Target=FBgn0036949.1 53 690 +
Chr1	stalkie_big_nohaplotig	exon	48543470	48544108	100	+	.	Parent=FBgn0036949.1.mrna1;Target=FBgn0036949.1 691 1329 +
Chr1	stalkie_big_nohaplotig	CDS	48542572	48542623	.	+	0	Parent=FBgn0036949.1.mrna1;Target=FBgn0036949.1 1 52 +
Chr1	stalkie_big_nohaplotig	CDS	48542759	48543396	.	+	2	Parent=FBgn0036949.1.mrna1;Target=FBgn0036949.1 53 690 +
Chr1	stalkie_big_nohaplotig	CDS	48543470	48544108	.	+	0	Parent=FBgn0036949.1.mrna1;Target=FBgn0036949.1 691 1329 +
Chr1	gffcl	locus	48547976	48549230	.	+	.	ID=RLOC_00007735;geneIDs=FBgn0036949.2.path1;transcripts=FBgn0036949.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48547976	48549230	.	+	.	ID=FBgn0036949.2.mrna1;geneID=FBgn0036949.2.path1;Name=FBgn0036949.2;Dir=sensecoverage=100.0;identity=99.9;matches=1073;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007735
Chr1	stalkie_big_nohaplotig	exon	48547976	48548009	100	+	.	Parent=FBgn0036949.2.mrna1;Target=FBgn0036949.2 1 34 +
Chr1	stalkie_big_nohaplotig	exon	48548130	48548770	100	+	.	Parent=FBgn0036949.2.mrna1;Target=FBgn0036949.2 35 675 +
Chr1	stalkie_big_nohaplotig	exon	48548832	48549230	99	+	.	Parent=FBgn0036949.2.mrna1;Target=FBgn0036949.2 676 1074 +
Chr1	stalkie_big_nohaplotig	CDS	48547976	48548009	.	+	0	Parent=FBgn0036949.2.mrna1;Target=FBgn0036949.2 1 34 +
Chr1	stalkie_big_nohaplotig	CDS	48548130	48548770	.	+	2	Parent=FBgn0036949.2.mrna1;Target=FBgn0036949.2 35 675 +
Chr1	stalkie_big_nohaplotig	CDS	48548832	48549230	.	+	0	Parent=FBgn0036949.2.mrna1;Target=FBgn0036949.2 676 1074 +
Chr1	gffcl	locus	48558646	48568882	.	+	.	ID=RLOC_00007736;geneIDs=FBgn0036948.1.path1;transcripts=FBgn0036948.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48558646	48568882	.	+	.	ID=FBgn0036948.1.mrna1;geneID=FBgn0036948.1.path1;Name=FBgn0036948.1;Dir=sensecoverage=100.0;identity=99.7;matches=1534;mismatches=4;indels=1;unknowns=0;locus=RLOC_00007736
Chr1	stalkie_big_nohaplotig	exon	48558646	48558705	95	+	.	Parent=FBgn0036948.1.mrna1;Target=FBgn0036948.1 1 61 +
Chr1	stalkie_big_nohaplotig	exon	48567345	48567898	100	+	.	Parent=FBgn0036948.1.mrna1;Target=FBgn0036948.1 62 615 +
Chr1	stalkie_big_nohaplotig	exon	48567959	48568882	99	+	.	Parent=FBgn0036948.1.mrna1;Target=FBgn0036948.1 616 1539 +
Chr1	stalkie_big_nohaplotig	CDS	48558699	48558705	.	+	0	Parent=FBgn0036948.1.mrna1;Target=FBgn0036948.1 55 61 +
Chr1	stalkie_big_nohaplotig	CDS	48567345	48567898	.	+	2	Parent=FBgn0036948.1.mrna1;Target=FBgn0036948.1 62 615 +
Chr1	stalkie_big_nohaplotig	CDS	48567959	48568882	.	+	0	Parent=FBgn0036948.1.mrna1;Target=FBgn0036948.1 616 1539 +
Chr1	gffcl	locus	48571407	49517193	.	+	.	ID=RLOC_00007737;geneIDs=comp7183_c0_seq1.path2;transcripts=comp7183_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	48571407	49517193	.	+	.	ID=comp7183_c0_seq1.mrna2;geneID=comp7183_c0_seq1.path2;Name=comp7183_c0_seq1;Dir=indeterminatecoverage=87.6;identity=90.6;matches=173;mismatches=17;indels=1;unknowns=0;locus=RLOC_00007737
Chr1	stalkie_big_nohaplotig	exon	48571407	48571449	88	+	.	Parent=comp7183_c0_seq1.mrna2;Target=comp7183_c0_seq1 69 26 .
Chr1	stalkie_big_nohaplotig	exon	49517047	49517193	91	+	.	Parent=comp7183_c0_seq1.mrna2;Target=comp7183_c0_seq1 216 70 .
Chr1	stalkie_big_nohaplotig	CDS	48571409	48571449	.	+	0	Parent=comp7183_c0_seq1.mrna2;Target=comp7183_c0_seq1 69 28 .
Chr1	stalkie_big_nohaplotig	CDS	49517047	49517079	.	+	1	Parent=comp7183_c0_seq1.mrna2;Target=comp7183_c0_seq1 102 70 .
Chr1	gffcl	locus	48581960	48583305	.	+	.	ID=RLOC_00007738;geneIDs=FBgn0036225.1.path1;transcripts=FBgn0036225.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48581960	48583305	.	+	.	ID=FBgn0036225.1.mrna1;geneID=FBgn0036225.1.path1;Name=FBgn0036225.1;Dir=sensecoverage=100.0;identity=100.0;matches=1053;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007738
Chr1	stalkie_big_nohaplotig	exon	48581960	48581996	100	+	.	Parent=FBgn0036225.1.mrna1;Target=FBgn0036225.1 1 37 +
Chr1	stalkie_big_nohaplotig	exon	48582075	48582546	100	+	.	Parent=FBgn0036225.1.mrna1;Target=FBgn0036225.1 38 509 +
Chr1	stalkie_big_nohaplotig	exon	48582618	48582684	100	+	.	Parent=FBgn0036225.1.mrna1;Target=FBgn0036225.1 510 576 +
Chr1	stalkie_big_nohaplotig	exon	48582829	48583305	100	+	.	Parent=FBgn0036225.1.mrna1;Target=FBgn0036225.1 577 1053 +
Chr1	stalkie_big_nohaplotig	CDS	48581960	48581996	.	+	0	Parent=FBgn0036225.1.mrna1;Target=FBgn0036225.1 1 37 +
Chr1	stalkie_big_nohaplotig	CDS	48582075	48582546	.	+	2	Parent=FBgn0036225.1.mrna1;Target=FBgn0036225.1 38 509 +
Chr1	stalkie_big_nohaplotig	CDS	48582618	48582684	.	+	1	Parent=FBgn0036225.1.mrna1;Target=FBgn0036225.1 510 576 +
Chr1	stalkie_big_nohaplotig	CDS	48582829	48583305	.	+	0	Parent=FBgn0036225.1.mrna1;Target=FBgn0036225.1 577 1053 +
Chr1	gffcl	locus	48591701	48592486	.	+	.	ID=RLOC_00007739;geneIDs=FBgn0036225.2.path1;transcripts=FBgn0036225.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48591701	48592486	.	+	.	ID=FBgn0036225.2.mrna1;geneID=FBgn0036225.2.path1;Name=FBgn0036225.2;Dir=sensecoverage=100.0;identity=99.8;matches=659;mismatches=0;indels=1;unknowns=0;Target=FBgn0036225.2 3 56 +;locus=RLOC_00007739
Chr1	stalkie_big_nohaplotig	exon	48591701	48591818	99	+	.	Parent=FBgn0036225.2.mrna1;Target=FBgn0036225.2 1 119 +
Chr1	stalkie_big_nohaplotig	exon	48591881	48591947	100	+	.	Parent=FBgn0036225.2.mrna1;Target=FBgn0036225.2 120 186 +
Chr1	stalkie_big_nohaplotig	exon	48592013	48592486	100	+	.	Parent=FBgn0036225.2.mrna1;Target=FBgn0036225.2 187 660 +
Chr1	stalkie_big_nohaplotig	CDS	48591703	48591755	.	+	0	Parent=FBgn0036225.2.mrna1
Chr1	gffcl	locus	48603413	48606825	.	+	.	ID=RLOC_00007740;geneIDs=FBgn0036953.1.path1;transcripts=FBgn0036953.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48603413	48606825	.	+	.	ID=FBgn0036953.1.mrna1;geneID=FBgn0036953.1.path1;Name=FBgn0036953.1;Dir=sensecoverage=100.0;identity=100.0;matches=1020;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007740
Chr1	stalkie_big_nohaplotig	exon	48603413	48603431	100	+	.	Parent=FBgn0036953.1.mrna1;Target=FBgn0036953.1 1 19 +
Chr1	stalkie_big_nohaplotig	exon	48605698	48605839	100	+	.	Parent=FBgn0036953.1.mrna1;Target=FBgn0036953.1 20 161 +
Chr1	stalkie_big_nohaplotig	exon	48605896	48606068	100	+	.	Parent=FBgn0036953.1.mrna1;Target=FBgn0036953.1 162 334 +
Chr1	stalkie_big_nohaplotig	exon	48606140	48606825	100	+	.	Parent=FBgn0036953.1.mrna1;Target=FBgn0036953.1 335 1020 +
Chr1	stalkie_big_nohaplotig	CDS	48603413	48603431	.	+	0	Parent=FBgn0036953.1.mrna1;Target=FBgn0036953.1 1 19 +
Chr1	stalkie_big_nohaplotig	CDS	48605698	48605839	.	+	2	Parent=FBgn0036953.1.mrna1;Target=FBgn0036953.1 20 161 +
Chr1	stalkie_big_nohaplotig	CDS	48605896	48606068	.	+	1	Parent=FBgn0036953.1.mrna1;Target=FBgn0036953.1 162 334 +
Chr1	stalkie_big_nohaplotig	CDS	48606140	48606825	.	+	2	Parent=FBgn0036953.1.mrna1;Target=FBgn0036953.1 335 1020 +
Chr1	gffcl	locus	48616833	48620188	.	+	.	ID=RLOC_00007741;geneIDs=FBgn0260393.1.path1;transcripts=FBgn0260393.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48616833	48620188	.	+	.	ID=FBgn0260393.1.mrna1;geneID=FBgn0260393.1.path1;Name=FBgn0260393.1;Dir=sensecoverage=100.0;identity=99.8;matches=1027;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007741
Chr1	stalkie_big_nohaplotig	exon	48616833	48616884	100	+	.	Parent=FBgn0260393.1.mrna1;Target=FBgn0260393.1 1 52 +
Chr1	stalkie_big_nohaplotig	exon	48619212	48620188	99	+	.	Parent=FBgn0260393.1.mrna1;Target=FBgn0260393.1 53 1029 +
Chr1	stalkie_big_nohaplotig	CDS	48616833	48616884	.	+	0	Parent=FBgn0260393.1.mrna1;Target=FBgn0260393.1 1 52 +
Chr1	stalkie_big_nohaplotig	CDS	48619212	48620188	.	+	2	Parent=FBgn0260393.1.mrna1;Target=FBgn0260393.1 53 1029 +
Chr1	gffcl	locus	48625556	48625616	.	-	.	ID=RLOC_00007742;geneIDs=comp151744_c0_seq1.path2;transcripts=comp151744_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	48625556	48625616	.	-	.	ID=comp151744_c0_seq1.mrna2;geneID=comp151744_c0_seq1.path2;Name=comp151744_c0_seq1;Dir=indeterminatecoverage=4.6;identity=100.0;matches=61;mismatches=0;indels=0;unknowns=0;Target=comp151744_c0_seq1 1313 1253 .;locus=RLOC_00007742
Chr1	stalkie_big_nohaplotig	exon	48625556	48625616	100	-	.	Parent=comp151744_c0_seq1.mrna2
Chr1	gffcl	locus	48632871	48652173	.	+	.	ID=RLOC_00007743;geneIDs=FBgn0053094.1.path1;transcripts=FBgn0053094.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48632871	48652173	.	+	.	ID=FBgn0053094.1.mrna1;geneID=FBgn0053094.1.path1;Name=FBgn0053094.1;Dir=sensecoverage=100.0;identity=99.9;matches=1322;mismatches=0;indels=1;unknowns=0;locus=RLOC_00007743
Chr1	stalkie_big_nohaplotig	exon	48632871	48632954	98	+	.	Parent=FBgn0053094.1.mrna1;Target=FBgn0053094.1 1 85 +
Chr1	stalkie_big_nohaplotig	exon	48642266	48642603	100	+	.	Parent=FBgn0053094.1.mrna1;Target=FBgn0053094.1 86 423 +
Chr1	stalkie_big_nohaplotig	exon	48645304	48645530	100	+	.	Parent=FBgn0053094.1.mrna1;Target=FBgn0053094.1 424 650 +
Chr1	stalkie_big_nohaplotig	exon	48645590	48645710	100	+	.	Parent=FBgn0053094.1.mrna1;Target=FBgn0053094.1 651 771 +
Chr1	stalkie_big_nohaplotig	exon	48645792	48645902	100	+	.	Parent=FBgn0053094.1.mrna1;Target=FBgn0053094.1 772 882 +
Chr1	stalkie_big_nohaplotig	exon	48645987	48646159	100	+	.	Parent=FBgn0053094.1.mrna1;Target=FBgn0053094.1 883 1055 +
Chr1	stalkie_big_nohaplotig	exon	48646321	48646478	100	+	.	Parent=FBgn0053094.1.mrna1;Target=FBgn0053094.1 1056 1213 +
Chr1	stalkie_big_nohaplotig	exon	48652064	48652173	100	+	.	Parent=FBgn0053094.1.mrna1;Target=FBgn0053094.1 1214 1323 +
Chr1	stalkie_big_nohaplotig	CDS	48632873	48632954	.	+	0	Parent=FBgn0053094.1.mrna1;Target=FBgn0053094.1 3 85 +
Chr1	stalkie_big_nohaplotig	CDS	48642266	48642314	.	+	2	Parent=FBgn0053094.1.mrna1;Target=FBgn0053094.1 86 134 +
Chr1	gffcl	locus	48657610	48658091	.	-	.	ID=RLOC_00007744;geneIDs=comp152975_c0_seq1.path1;transcripts=comp152975_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48657610	48658091	.	-	.	ID=comp152975_c0_seq1.mrna1;geneID=comp152975_c0_seq1.path1;Name=comp152975_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=479;mismatches=3;indels=0;unknowns=0;Target=comp152975_c0_seq1 482 1 .;CDS_Target=comp152975_c0_seq1 185 63 .;locus=RLOC_00007744
Chr1	stalkie_big_nohaplotig	exon	48657610	48658091	99	-	.	Parent=comp152975_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48657907	48658029	.	-	0	Parent=comp152975_c0_seq1.mrna1
Chr1	gffcl	locus	48659878	48661169	.	-	.	ID=RLOC_00007745;geneIDs=comp156264_c0_seq1.path1;transcripts=comp156264_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48659878	48661169	.	-	.	ID=comp156264_c0_seq1.mrna1;geneID=comp156264_c0_seq1.path1;Name=comp156264_c0_seq1;Dir=antisensecoverage=80.5;identity=98.3;matches=1071;mismatches=16;indels=2;unknowns=0;locus=RLOC_00007745
Chr1	stalkie_big_nohaplotig	exon	48659878	48660476	97	-	.	Parent=comp156264_c0_seq1.mrna1;Target=comp156264_c0_seq1 264 864 -
Chr1	stalkie_big_nohaplotig	exon	48660540	48660739	100	-	.	Parent=comp156264_c0_seq1.mrna1;Target=comp156264_c0_seq1 865 1064 -
Chr1	stalkie_big_nohaplotig	exon	48660809	48660966	100	-	.	Parent=comp156264_c0_seq1.mrna1;Target=comp156264_c0_seq1 1065 1222 -
Chr1	stalkie_big_nohaplotig	exon	48661040	48661169	97	-	.	Parent=comp156264_c0_seq1.mrna1;Target=comp156264_c0_seq1 1223 1352 -
Chr1	stalkie_big_nohaplotig	CDS	48660446	48660476	.	-	2	Parent=comp156264_c0_seq1.mrna1;Target=comp156264_c0_seq1 833 864 .
Chr1	stalkie_big_nohaplotig	CDS	48660540	48660739	.	-	1	Parent=comp156264_c0_seq1.mrna1;Target=comp156264_c0_seq1 865 1064 .
Chr1	stalkie_big_nohaplotig	CDS	48660809	48660966	.	-	0	Parent=comp156264_c0_seq1.mrna1;Target=comp156264_c0_seq1 1065 1222 .
Chr1	stalkie_big_nohaplotig	CDS	48661040	48661168	.	-	0	Parent=comp156264_c0_seq1.mrna1;Target=comp156264_c0_seq1 1223 1351 .
Chr1	gffcl	locus	48661703	48664663	.	-	.	ID=RLOC_00007746;geneIDs=ORF2245.path1;transcripts=ORF2245.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48661703	48664663	.	-	.	ID=ORF2245.mrna1;geneID=ORF2245.path1;Name=ORF2245;Dir=sensecoverage=100.0;identity=99.9;matches=890;mismatches=0;indels=1;unknowns=0;Target=ORF2245 3 146 +;locus=RLOC_00007746
Chr1	stalkie_big_nohaplotig	exon	48661703	48661966	100	-	.	Parent=ORF2245.mrna1;Target=ORF2245 628 891 +
Chr1	stalkie_big_nohaplotig	exon	48664038	48664663	99	-	.	Parent=ORF2245.mrna1;Target=ORF2245 1 627 +
Chr1	stalkie_big_nohaplotig	CDS	48664519	48664661	.	-	0	Parent=ORF2245.mrna1
Chr1	gffcl	locus	48668523	48670342	.	-	.	ID=RLOC_00007747;geneIDs=ORF1489.path1,comp156953_c0_seq1.path1;transcripts=comp156953_c0_seq1.mrna1,ORF1489.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48668523	48670342	.	-	.	ID=comp156953_c0_seq1.mrna1;geneID=comp156953_c0_seq1.path1;Name=comp156953_c0_seq1;Dir=sensecoverage=96.4;identity=80.4;matches=941;mismatches=7;indels=222;unknowns=0;locus=RLOC_00007747
Chr1	stalkie_big_nohaplotig	exon	48668523	48668852	99	-	.	Parent=comp156953_c0_seq1.mrna1;Target=comp156953_c0_seq1 940 1269 +
Chr1	stalkie_big_nohaplotig	exon	48669661	48670214	70	-	.	Parent=comp156953_c0_seq1.mrna1;Target=comp156953_c0_seq1 90 865 +
Chr1	stalkie_big_nohaplotig	exon	48670279	48670342	100	-	.	Parent=comp156953_c0_seq1.mrna1;Target=comp156953_c0_seq1 26 89 +
Chr1	stalkie_big_nohaplotig	CDS	48669672	48670214	.	-	2	Parent=comp156953_c0_seq1.mrna1;Target=comp156953_c0_seq1 90 712 +
Chr1	stalkie_big_nohaplotig	CDS	48670279	48670342	.	-	0	Parent=comp156953_c0_seq1.mrna1;Target=comp156953_c0_seq1 26 89 +
Chr1	stalkie_big_nohaplotig	mRNA	48669262	48670342	.	-	.	ID=ORF1489.mrna1;geneID=ORF1489.path1;Name=ORF1489;Dir=sensecoverage=97.8;identity=94.5;matches=1004;mismatches=13;indels=45;unknowns=0;locus=RLOC_00007747
Chr1	stalkie_big_nohaplotig	exon	48669262	48670214	94	-	.	Parent=ORF1489.mrna1;Target=ORF1489 89 1086 +
Chr1	stalkie_big_nohaplotig	exon	48670279	48670342	100	-	.	Parent=ORF1489.mrna1;Target=ORF1489 25 88 +
Chr1	stalkie_big_nohaplotig	CDS	48669262	48670214	.	-	2	Parent=ORF1489.mrna1;Target=ORF1489 89 1086 +
Chr1	stalkie_big_nohaplotig	CDS	48670279	48670342	.	-	0	Parent=ORF1489.mrna1;Target=ORF1489 25 88 +
Chr1	gffcl	locus	48674115	48674344	.	+	.	ID=RLOC_00007748;geneIDs=comp148722_c0_seq1.path1;transcripts=comp148722_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48674115	48674344	.	+	.	ID=comp148722_c0_seq1.mrna1;geneID=comp148722_c0_seq1.path1;Name=comp148722_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=229;mismatches=1;indels=0;unknowns=0;Target=comp148722_c0_seq1 230 1 .;CDS_Target=comp148722_c0_seq1 229 146 .;locus=RLOC_00007748
Chr1	stalkie_big_nohaplotig	exon	48674115	48674344	99	+	.	Parent=comp148722_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48674260	48674343	.	+	0	Parent=comp148722_c0_seq1.mrna1
Chr1	gffcl	locus	48678111	48679554	.	-	.	ID=RLOC_00007750;geneIDs=ORF2500.path1,comp142751_c0_seq1.path1;transcripts=ORF2500.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48678652	48679554	.	-	.	ID=ORF2500.mrna1;geneID=ORF2500.path1;Name=ORF2500;Dir=sensecoverage=100.0;identity=99.5;matches=845;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007750
Chr1	stalkie_big_nohaplotig	exon	48678652	48679436	99	-	.	Parent=ORF2500.mrna1;Target=ORF2500 65 849 +
Chr1	stalkie_big_nohaplotig	exon	48679491	48679554	100	-	.	Parent=ORF2500.mrna1;Target=ORF2500 1 64 +
Chr1	stalkie_big_nohaplotig	CDS	48678652	48679436	.	-	2	Parent=ORF2500.mrna1;Target=ORF2500 65 849 +
Chr1	stalkie_big_nohaplotig	CDS	48679491	48679554	.	-	0	Parent=ORF2500.mrna1;Target=ORF2500 1 64 +
Chr1	gffcl	locus	48688382	48689105	.	-	.	ID=RLOC_00007751;geneIDs=comp146423_c0_seq1.path1;transcripts=comp146423_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48688382	48689105	.	-	.	ID=comp146423_c0_seq1.mrna1;geneID=comp146423_c0_seq1.path1;Name=comp146423_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=724;mismatches=0;indels=15;unknowns=0;Target=comp146423_c0_seq1 739 1 .;CDS_Target=comp146423_c0_seq1 578 459 .;locus=RLOC_00007751
Chr1	stalkie_big_nohaplotig	exon	48688382	48689105	97	-	.	Parent=comp146423_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48688543	48688662	.	-	0	Parent=comp146423_c0_seq1.mrna1
Chr1	gffcl	locus	48691235	48692499	.	+	.	ID=RLOC_00007752;geneIDs=comp160219_c0_seq1.path1;transcripts=comp160219_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48691235	48692499	.	+	.	ID=comp160219_c0_seq1.mrna1;geneID=comp160219_c0_seq1.path1;Name=comp160219_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.5;matches=1259;mismatches=6;indels=0;unknowns=0;Target=comp160219_c0_seq1 1270 6 .;CDS_Target=comp160219_c0_seq1 1268 855 .;locus=RLOC_00007752
Chr1	stalkie_big_nohaplotig	exon	48691235	48692499	99	+	.	Parent=comp160219_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48692084	48692497	.	+	0	Parent=comp160219_c0_seq1.mrna1
Chr1	gffcl	locus	48692650	48693682	.	-	.	ID=RLOC_00007753;geneIDs=ORF1871.path1;transcripts=ORF1871.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48692650	48693682	.	-	.	ID=ORF1871.mrna1;geneID=ORF1871.path1;Name=ORF1871;Dir=sensecoverage=100.0;identity=99.5;matches=970;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007753
Chr1	stalkie_big_nohaplotig	exon	48692650	48693596	99	-	.	Parent=ORF1871.mrna1;Target=ORF1871 29 975 +
Chr1	stalkie_big_nohaplotig	exon	48693655	48693682	96	-	.	Parent=ORF1871.mrna1;Target=ORF1871 1 28 +
Chr1	stalkie_big_nohaplotig	CDS	48692650	48693596	.	-	2	Parent=ORF1871.mrna1;Target=ORF1871 29 975 +
Chr1	stalkie_big_nohaplotig	CDS	48693655	48693682	.	-	0	Parent=ORF1871.mrna1;Target=ORF1871 1 28 +
Chr1	gffcl	locus	48697713	48700199	.	-	.	ID=RLOC_00007754;geneIDs=FBgn0053983.1.path1;transcripts=FBgn0053983.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48697713	48700199	.	-	.	ID=FBgn0053983.1.mrna1;geneID=FBgn0053983.1.path1;Name=FBgn0053983.1;Dir=sensecoverage=100.0;identity=100.0;matches=807;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007754
Chr1	stalkie_big_nohaplotig	exon	48697713	48697907	100	-	.	Parent=FBgn0053983.1.mrna1;Target=FBgn0053983.1 613 807 +
Chr1	stalkie_big_nohaplotig	exon	48699588	48700199	100	-	.	Parent=FBgn0053983.1.mrna1;Target=FBgn0053983.1 1 612 +
Chr1	stalkie_big_nohaplotig	CDS	48697713	48697907	.	-	0	Parent=FBgn0053983.1.mrna1;Target=FBgn0053983.1 613 807 +
Chr1	stalkie_big_nohaplotig	CDS	48699588	48700199	.	-	0	Parent=FBgn0053983.1.mrna1;Target=FBgn0053983.1 1 612 +
Chr1	gffcl	locus	48703966	48704942	.	+	.	ID=RLOC_00007755;geneIDs=FBgn0053985.2.path1;transcripts=FBgn0053985.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48703966	48704942	.	+	.	ID=FBgn0053985.2.mrna1;geneID=FBgn0053985.2.path1;Name=FBgn0053985.2;Dir=sensecoverage=100.0;identity=100.0;matches=912;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007755
Chr1	stalkie_big_nohaplotig	exon	48703966	48704673	100	+	.	Parent=FBgn0053985.2.mrna1;Target=FBgn0053985.2 1 708 +
Chr1	stalkie_big_nohaplotig	exon	48704739	48704942	100	+	.	Parent=FBgn0053985.2.mrna1;Target=FBgn0053985.2 709 912 +
Chr1	stalkie_big_nohaplotig	CDS	48703966	48704673	.	+	0	Parent=FBgn0053985.2.mrna1;Target=FBgn0053985.2 1 708 +
Chr1	stalkie_big_nohaplotig	CDS	48704739	48704942	.	+	0	Parent=FBgn0053985.2.mrna1;Target=FBgn0053985.2 709 912 +
Chr1	gffcl	locus	48708436	48711751	.	+	.	ID=RLOC_00007756;geneIDs=FBgn0053986.1.path1;transcripts=FBgn0053986.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48708436	48711751	.	+	.	ID=FBgn0053986.1.mrna1;geneID=FBgn0053986.1.path1;Name=FBgn0053986.1;Dir=sensecoverage=100.0;identity=100.0;matches=855;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007756
Chr1	stalkie_big_nohaplotig	exon	48708436	48708466	100	+	.	Parent=FBgn0053986.1.mrna1;Target=FBgn0053986.1 1 31 +
Chr1	stalkie_big_nohaplotig	exon	48710928	48711751	100	+	.	Parent=FBgn0053986.1.mrna1;Target=FBgn0053986.1 32 855 +
Chr1	stalkie_big_nohaplotig	CDS	48708436	48708466	.	+	0	Parent=FBgn0053986.1.mrna1;Target=FBgn0053986.1 1 31 +
Chr1	stalkie_big_nohaplotig	CDS	48710928	48711751	.	+	2	Parent=FBgn0053986.1.mrna1;Target=FBgn0053986.1 32 855 +
Chr1	gffcl	locus	48723946	48724384	.	+	.	ID=RLOC_00007757;geneIDs=comp131039_c0_seq1.path1;transcripts=comp131039_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48723946	48724384	.	+	.	ID=comp131039_c0_seq1.mrna1;geneID=comp131039_c0_seq1.path1;Name=comp131039_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=314;mismatches=0;indels=0;unknowns=0;Target=comp131039_c0_seq1 14 82 .;locus=RLOC_00007757
Chr1	stalkie_big_nohaplotig	exon	48723946	48724046	100	+	.	Parent=comp131039_c0_seq1.mrna1;Target=comp131039_c0_seq1 214 314 -
Chr1	stalkie_big_nohaplotig	exon	48724172	48724384	100	+	.	Parent=comp131039_c0_seq1.mrna1;Target=comp131039_c0_seq1 1 213 -
Chr1	stalkie_big_nohaplotig	CDS	48724303	48724371	.	+	0	Parent=comp131039_c0_seq1.mrna1
Chr1	gffcl	locus	48726200	48726848	.	+	.	ID=RLOC_00007758;geneIDs=comp159412_c2_seq1.path1;transcripts=comp159412_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48726200	48726848	.	+	.	ID=comp159412_c2_seq1.mrna1;geneID=comp159412_c2_seq1.path1;Name=comp159412_c2_seq1;Dir=indeterminatecoverage=85.1;identity=87.1;matches=566;mismatches=29;indels=55;unknowns=0;Target=comp159412_c2_seq1 596 1 .;CDS_Target=comp159412_c2_seq1 478 470 .;locus=RLOC_00007758
Chr1	stalkie_big_nohaplotig	exon	48726200	48726848	87	+	.	Parent=comp159412_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48726722	48726730	.	+	0	Parent=comp159412_c2_seq1.mrna1
Chr1	gffcl	locus	48727056	48728739	.	-	.	ID=RLOC_00007759;geneIDs=FBgn0037087.1.path1;transcripts=FBgn0037087.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48727056	48728739	.	-	.	ID=FBgn0037087.1.mrna1;geneID=FBgn0037087.1.path1;Name=FBgn0037087.1;Dir=sensecoverage=100.0;identity=99.6;matches=478;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007759
Chr1	stalkie_big_nohaplotig	exon	48727056	48727412	100	-	.	Parent=FBgn0037087.1.mrna1;Target=FBgn0037087.1 124 480 +
Chr1	stalkie_big_nohaplotig	exon	48728564	48728671	98	-	.	Parent=FBgn0037087.1.mrna1;Target=FBgn0037087.1 16 123 +
Chr1	stalkie_big_nohaplotig	exon	48728725	48728739	100	-	.	Parent=FBgn0037087.1.mrna1;Target=FBgn0037087.1 1 15 +
Chr1	stalkie_big_nohaplotig	CDS	48727056	48727412	.	-	0	Parent=FBgn0037087.1.mrna1;Target=FBgn0037087.1 124 480 +
Chr1	stalkie_big_nohaplotig	CDS	48728564	48728671	.	-	0	Parent=FBgn0037087.1.mrna1;Target=FBgn0037087.1 16 123 +
Chr1	stalkie_big_nohaplotig	CDS	48728725	48728739	.	-	0	Parent=FBgn0037087.1.mrna1;Target=FBgn0037087.1 1 15 +
Chr1	gffcl	locus	48730500	48730964	.	-	.	ID=RLOC_00007760;geneIDs=FBgn0036825.1.path1;transcripts=FBgn0036825.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48730500	48730964	.	-	.	ID=FBgn0036825.1.mrna1;geneID=FBgn0036825.1.path1;Name=FBgn0036825.1;Dir=indeterminatecoverage=98.1;identity=100.0;matches=465;mismatches=0;indels=0;unknowns=0;Target=FBgn0036825.1 474 10 .;locus=RLOC_00007760
Chr1	stalkie_big_nohaplotig	exon	48730500	48730964	100	-	.	Parent=FBgn0036825.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48730500	48730964	.	-	0	Parent=FBgn0036825.1.mrna1
Chr1	gffcl	locus	48733095	48734115	.	-	.	ID=RLOC_00007761;geneIDs=comp159137_c1_seq1.path1;transcripts=comp159137_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48733095	48734115	.	-	.	ID=comp159137_c1_seq1.mrna1;geneID=comp159137_c1_seq1.path1;Name=comp159137_c1_seq1;Dir=indeterminatecoverage=100.0;identity=96.3;matches=987;mismatches=19;indels=19;unknowns=0;Target=comp159137_c1_seq1 1010 1 .;CDS_Target=comp159137_c1_seq1 643 470 .;locus=RLOC_00007761
Chr1	stalkie_big_nohaplotig	exon	48733095	48734115	96	-	.	Parent=comp159137_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48733473	48733646	.	-	0	Parent=comp159137_c1_seq1.mrna1
Chr1	gffcl	locus	48738238	48755436	.	+	.	ID=RLOC_00007762;geneIDs=FBgn0036824.1.path1;transcripts=FBgn0036824.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48738238	48755436	.	+	.	ID=FBgn0036824.1.mrna1;geneID=FBgn0036824.1.path1;Name=FBgn0036824.1;Dir=sensecoverage=100.0;identity=99.9;matches=1259;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007762
Chr1	stalkie_big_nohaplotig	exon	48738238	48738291	100	+	.	Parent=FBgn0036824.1.mrna1;Target=FBgn0036824.1 1 54 +
Chr1	stalkie_big_nohaplotig	exon	48738424	48738529	100	+	.	Parent=FBgn0036824.1.mrna1;Target=FBgn0036824.1 55 160 +
Chr1	stalkie_big_nohaplotig	exon	48752712	48753019	100	+	.	Parent=FBgn0036824.1.mrna1;Target=FBgn0036824.1 161 468 +
Chr1	stalkie_big_nohaplotig	exon	48753242	48753412	100	+	.	Parent=FBgn0036824.1.mrna1;Target=FBgn0036824.1 469 639 +
Chr1	stalkie_big_nohaplotig	exon	48754746	48755142	99	+	.	Parent=FBgn0036824.1.mrna1;Target=FBgn0036824.1 640 1036 +
Chr1	stalkie_big_nohaplotig	exon	48755213	48755436	100	+	.	Parent=FBgn0036824.1.mrna1;Target=FBgn0036824.1 1037 1260 +
Chr1	stalkie_big_nohaplotig	CDS	48738238	48738291	.	+	0	Parent=FBgn0036824.1.mrna1;Target=FBgn0036824.1 1 54 +
Chr1	stalkie_big_nohaplotig	CDS	48738424	48738529	.	+	0	Parent=FBgn0036824.1.mrna1;Target=FBgn0036824.1 55 160 +
Chr1	stalkie_big_nohaplotig	CDS	48752712	48753019	.	+	2	Parent=FBgn0036824.1.mrna1;Target=FBgn0036824.1 161 468 +
Chr1	stalkie_big_nohaplotig	CDS	48753242	48753412	.	+	0	Parent=FBgn0036824.1.mrna1;Target=FBgn0036824.1 469 639 +
Chr1	stalkie_big_nohaplotig	CDS	48754746	48755142	.	+	0	Parent=FBgn0036824.1.mrna1;Target=FBgn0036824.1 640 1036 +
Chr1	stalkie_big_nohaplotig	CDS	48755213	48755436	.	+	2	Parent=FBgn0036824.1.mrna1;Target=FBgn0036824.1 1037 1260 +
Chr1	gffcl	locus	48744587	48745040	.	+	.	ID=RLOC_00007763;geneIDs=comp144274_c0_seq1.path1;transcripts=comp144274_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48744587	48745040	.	+	.	ID=comp144274_c0_seq1.mrna1;geneID=comp144274_c0_seq1.path1;Name=comp144274_c0_seq1;Dir=indeterminatecoverage=95.9;identity=96.7;matches=439;mismatches=4;indels=11;unknowns=0;Target=comp144274_c0_seq1 462 20 .;CDS_Target=comp144274_c0_seq1 58 38 .;locus=RLOC_00007763
Chr1	stalkie_big_nohaplotig	exon	48744587	48745040	96	+	.	Parent=comp144274_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48744605	48744626	.	+	0	Parent=comp144274_c0_seq1.mrna1
Chr1	gffcl	locus	48767969	48768348	.	+	.	ID=RLOC_00007764;geneIDs=comp152147_c0_seq1.path1;transcripts=comp152147_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48767969	48768348	.	+	.	ID=comp152147_c0_seq1.mrna1;geneID=comp152147_c0_seq1.path1;Name=comp152147_c0_seq1;Dir=indeterminatecoverage=51.8;identity=99.2;matches=377;mismatches=2;indels=1;unknowns=0;Target=comp152147_c0_seq1 390 12 .;CDS_Target=comp152147_c0_seq1 45 13 .;locus=RLOC_00007764
Chr1	stalkie_big_nohaplotig	exon	48767969	48768348	99	+	.	Parent=comp152147_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48767970	48768002	.	+	0	Parent=comp152147_c0_seq1.mrna1
Chr1	gffcl	locus	48782703	48814674	.	+	.	ID=RLOC_00007765;geneIDs=FBgn0036821.1.path1;transcripts=FBgn0036821.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48782703	48814674	.	+	.	ID=FBgn0036821.1.mrna1;geneID=FBgn0036821.1.path1;Name=FBgn0036821.1;Dir=sensecoverage=100.0;identity=99.8;matches=1835;mismatches=3;indels=1;unknowns=0;locus=RLOC_00007765
Chr1	stalkie_big_nohaplotig	exon	48782703	48782817	100	+	.	Parent=FBgn0036821.1.mrna1;Target=FBgn0036821.1 1 115 +
Chr1	stalkie_big_nohaplotig	exon	48784421	48784575	100	+	.	Parent=FBgn0036821.1.mrna1;Target=FBgn0036821.1 116 270 +
Chr1	stalkie_big_nohaplotig	exon	48811313	48811486	100	+	.	Parent=FBgn0036821.1.mrna1;Target=FBgn0036821.1 271 444 +
Chr1	stalkie_big_nohaplotig	exon	48811544	48812081	99	+	.	Parent=FBgn0036821.1.mrna1;Target=FBgn0036821.1 445 982 +
Chr1	stalkie_big_nohaplotig	exon	48812152	48812505	100	+	.	Parent=FBgn0036821.1.mrna1;Target=FBgn0036821.1 983 1336 +
Chr1	stalkie_big_nohaplotig	exon	48812573	48812775	100	+	.	Parent=FBgn0036821.1.mrna1;Target=FBgn0036821.1 1337 1539 +
Chr1	stalkie_big_nohaplotig	exon	48812833	48812915	100	+	.	Parent=FBgn0036821.1.mrna1;Target=FBgn0036821.1 1540 1622 +
Chr1	stalkie_big_nohaplotig	exon	48814459	48814674	99	+	.	Parent=FBgn0036821.1.mrna1;Target=FBgn0036821.1 1623 1839 +
Chr1	stalkie_big_nohaplotig	CDS	48782703	48782817	.	+	0	Parent=FBgn0036821.1.mrna1;Target=FBgn0036821.1 1 115 +
Chr1	stalkie_big_nohaplotig	CDS	48784421	48784575	.	+	2	Parent=FBgn0036821.1.mrna1;Target=FBgn0036821.1 116 270 +
Chr1	stalkie_big_nohaplotig	CDS	48811313	48811486	.	+	0	Parent=FBgn0036821.1.mrna1;Target=FBgn0036821.1 271 444 +
Chr1	stalkie_big_nohaplotig	CDS	48811544	48812081	.	+	0	Parent=FBgn0036821.1.mrna1;Target=FBgn0036821.1 445 982 +
Chr1	stalkie_big_nohaplotig	CDS	48812152	48812505	.	+	2	Parent=FBgn0036821.1.mrna1;Target=FBgn0036821.1 983 1336 +
Chr1	stalkie_big_nohaplotig	CDS	48812573	48812775	.	+	2	Parent=FBgn0036821.1.mrna1;Target=FBgn0036821.1 1337 1539 +
Chr1	stalkie_big_nohaplotig	CDS	48812833	48812915	.	+	0	Parent=FBgn0036821.1.mrna1;Target=FBgn0036821.1 1540 1622 +
Chr1	stalkie_big_nohaplotig	CDS	48814459	48814674	.	+	1	Parent=FBgn0036821.1.mrna1;Target=FBgn0036821.1 1623 1839 +
Chr1	gffcl	locus	48815252	48816156	.	-	.	ID=RLOC_00007766;geneIDs=comp147749_c0_seq1.path1;transcripts=comp147749_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48815252	48816156	.	-	.	ID=comp147749_c0_seq1.mrna1;geneID=comp147749_c0_seq1.path1;Name=comp147749_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.8;matches=903;mismatches=2;indels=0;unknowns=0;Target=comp147749_c0_seq1 920 16 .;CDS_Target=comp147749_c0_seq1 459 298 .;locus=RLOC_00007766
Chr1	stalkie_big_nohaplotig	exon	48815252	48816156	99	-	.	Parent=comp147749_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48815713	48815874	.	-	0	Parent=comp147749_c0_seq1.mrna1
Chr1	gffcl	locus	48818472	48819248	.	-	.	ID=RLOC_00007767;geneIDs=comp157880_c1_seq1.path1;transcripts=comp157880_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48818472	48819248	.	-	.	ID=comp157880_c1_seq1.mrna1;geneID=comp157880_c1_seq1.path1;Name=comp157880_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=765;mismatches=12;indels=0;unknowns=0;Target=comp157880_c1_seq1 777 1 .;CDS_Target=comp157880_c1_seq1 370 260 .;locus=RLOC_00007767
Chr1	stalkie_big_nohaplotig	exon	48818472	48819248	98	-	.	Parent=comp157880_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48818879	48818989	.	-	0	Parent=comp157880_c1_seq1.mrna1
Chr1	gffcl	locus	48819451	48819839	.	-	.	ID=RLOC_00007768;geneIDs=comp153777_c0_seq1.path1;transcripts=comp153777_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48819451	48819839	.	-	.	ID=comp153777_c0_seq1.mrna1;geneID=comp153777_c0_seq1.path1;Name=comp153777_c0_seq1;Dir=indeterminatecoverage=99.0;identity=96.2;matches=375;mismatches=14;indels=1;unknowns=0;Target=comp153777_c0_seq1 390 1 .;CDS_Target=comp153777_c0_seq1 51 1 .;locus=RLOC_00007768
Chr1	stalkie_big_nohaplotig	exon	48819451	48819839	96	-	.	Parent=comp153777_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48819790	48819839	.	-	0	Parent=comp153777_c0_seq1.mrna1
Chr1	gffcl	locus	48820841	48821038	.	-	.	ID=RLOC_00007769;geneIDs=comp82122_c0_seq1.path1;transcripts=comp82122_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48820841	48821038	.	-	.	ID=comp82122_c0_seq1.mrna1;geneID=comp82122_c0_seq1.path1;Name=comp82122_c0_seq1;Dir=indeterminatecoverage=93.8;identity=99.5;matches=197;mismatches=1;indels=0;unknowns=0;Target=comp82122_c0_seq1 198 1 .;CDS_Target=comp82122_c0_seq1 198 154 .;locus=RLOC_00007769
Chr1	stalkie_big_nohaplotig	exon	48820841	48821038	99	-	.	Parent=comp82122_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48820841	48820885	.	-	0	Parent=comp82122_c0_seq1.mrna1
Chr1	gffcl	locus	48825402	48833293	.	+	.	ID=RLOC_00007770;geneIDs=FBgn0052225.1.path1;transcripts=FBgn0052225.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48825402	48833293	.	+	.	ID=FBgn0052225.1.mrna1;geneID=FBgn0052225.1.path1;Name=FBgn0052225.1;Dir=sensecoverage=100.0;identity=99.9;matches=917;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007770
Chr1	stalkie_big_nohaplotig	exon	48825402	48825543	100	+	.	Parent=FBgn0052225.1.mrna1;Target=FBgn0052225.1 1 142 +
Chr1	stalkie_big_nohaplotig	exon	48825939	48826021	100	+	.	Parent=FBgn0052225.1.mrna1;Target=FBgn0052225.1 143 225 +
Chr1	stalkie_big_nohaplotig	exon	48829033	48829281	100	+	.	Parent=FBgn0052225.1.mrna1;Target=FBgn0052225.1 226 474 +
Chr1	stalkie_big_nohaplotig	exon	48832790	48833193	99	+	.	Parent=FBgn0052225.1.mrna1;Target=FBgn0052225.1 475 878 +
Chr1	stalkie_big_nohaplotig	exon	48833254	48833293	100	+	.	Parent=FBgn0052225.1.mrna1;Target=FBgn0052225.1 879 918 +
Chr1	stalkie_big_nohaplotig	CDS	48825402	48825543	.	+	0	Parent=FBgn0052225.1.mrna1;Target=FBgn0052225.1 1 142 +
Chr1	stalkie_big_nohaplotig	CDS	48825939	48826021	.	+	2	Parent=FBgn0052225.1.mrna1;Target=FBgn0052225.1 143 225 +
Chr1	stalkie_big_nohaplotig	CDS	48829033	48829281	.	+	0	Parent=FBgn0052225.1.mrna1;Target=FBgn0052225.1 226 474 +
Chr1	stalkie_big_nohaplotig	CDS	48832790	48833193	.	+	0	Parent=FBgn0052225.1.mrna1;Target=FBgn0052225.1 475 878 +
Chr1	stalkie_big_nohaplotig	CDS	48833254	48833293	.	+	1	Parent=FBgn0052225.1.mrna1;Target=FBgn0052225.1 879 918 +
Chr1	gffcl	locus	48867367	48868647	.	+	.	ID=RLOC_00007771;geneIDs=FBgn0011723.path1;transcripts=FBgn0011723.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48867367	48868647	.	+	.	ID=FBgn0011723.mrna1;geneID=FBgn0011723.path1;Name=FBgn0011723;Dir=sensecoverage=100.0;identity=99.8;matches=1123;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007771
Chr1	stalkie_big_nohaplotig	exon	48867367	48867811	99	+	.	Parent=FBgn0011723.mrna1;Target=FBgn0011723 1 445 +
Chr1	stalkie_big_nohaplotig	exon	48867879	48868245	100	+	.	Parent=FBgn0011723.mrna1;Target=FBgn0011723 446 812 +
Chr1	stalkie_big_nohaplotig	exon	48868335	48868647	100	+	.	Parent=FBgn0011723.mrna1;Target=FBgn0011723 813 1125 +
Chr1	stalkie_big_nohaplotig	CDS	48867367	48867811	.	+	0	Parent=FBgn0011723.mrna1;Target=FBgn0011723 1 445 +
Chr1	stalkie_big_nohaplotig	CDS	48867879	48868245	.	+	2	Parent=FBgn0011723.mrna1;Target=FBgn0011723 446 812 +
Chr1	stalkie_big_nohaplotig	CDS	48868335	48868647	.	+	1	Parent=FBgn0011723.mrna1;Target=FBgn0011723 813 1125 +
Chr1	gffcl	locus	48875350	48876122	.	+	.	ID=RLOC_00007774;geneIDs=comp157487_c0_seq1.path1;transcripts=comp157487_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48875350	48876122	.	+	.	ID=comp157487_c0_seq1.mrna1;geneID=comp157487_c0_seq1.path1;Name=comp157487_c0_seq1;Dir=indeterminatecoverage=97.5;identity=95.1;matches=745;mismatches=24;indels=14;unknowns=0;Target=comp157487_c0_seq1 779 1 .;CDS_Target=comp157487_c0_seq1 422 363 .;locus=RLOC_00007774
Chr1	stalkie_big_nohaplotig	exon	48875350	48876122	95	+	.	Parent=comp157487_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	48875715	48875774	.	+	0	Parent=comp157487_c0_seq1.mrna1
Chr1	gffcl	locus	48909290	48913390	.	-	.	ID=RLOC_00007775;geneIDs=FBgn0036764.1.path1;transcripts=FBgn0036764.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48909290	48913390	.	-	.	ID=FBgn0036764.1.mrna1;geneID=FBgn0036764.1.path1;Name=FBgn0036764.1;Dir=sensecoverage=93.6;identity=99.9;matches=1835;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007775
Chr1	stalkie_big_nohaplotig	exon	48909290	48909450	100	-	.	Parent=FBgn0036764.1.mrna1;Target=FBgn0036764.1 1802 1962 +
Chr1	stalkie_big_nohaplotig	exon	48909511	48909771	100	-	.	Parent=FBgn0036764.1.mrna1;Target=FBgn0036764.1 1541 1801 +
Chr1	stalkie_big_nohaplotig	exon	48909846	48910631	99	-	.	Parent=FBgn0036764.1.mrna1;Target=FBgn0036764.1 755 1540 +
Chr1	stalkie_big_nohaplotig	exon	48910701	48910961	100	-	.	Parent=FBgn0036764.1.mrna1;Target=FBgn0036764.1 494 754 +
Chr1	stalkie_big_nohaplotig	exon	48913023	48913390	99	-	.	Parent=FBgn0036764.1.mrna1;Target=FBgn0036764.1 126 493 +
Chr1	stalkie_big_nohaplotig	CDS	48909290	48909450	.	-	2	Parent=FBgn0036764.1.mrna1;Target=FBgn0036764.1 1802 1962 +
Chr1	stalkie_big_nohaplotig	CDS	48909511	48909771	.	-	2	Parent=FBgn0036764.1.mrna1;Target=FBgn0036764.1 1541 1801 +
Chr1	stalkie_big_nohaplotig	CDS	48909846	48910631	.	-	2	Parent=FBgn0036764.1.mrna1;Target=FBgn0036764.1 755 1540 +
Chr1	stalkie_big_nohaplotig	CDS	48910701	48910961	.	-	2	Parent=FBgn0036764.1.mrna1;Target=FBgn0036764.1 494 754 +
Chr1	stalkie_big_nohaplotig	CDS	48913023	48913389	.	-	0	Parent=FBgn0036764.1.mrna1;Target=FBgn0036764.1 127 493 +
Chr1	gffcl	locus	48997813	48998665	.	+	.	ID=RLOC_00007776;geneIDs=FBgn0037130.1.path1;transcripts=FBgn0037130.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	48997813	48998665	.	+	.	ID=FBgn0037130.1.mrna1;geneID=FBgn0037130.1.path1;Name=FBgn0037130.1;Dir=sensecoverage=37.9;identity=99.9;matches=690;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007776
Chr1	stalkie_big_nohaplotig	exon	48997813	48998078	99	+	.	Parent=FBgn0037130.1.mrna1;Target=FBgn0037130.1 1 266 +
Chr1	stalkie_big_nohaplotig	exon	48998163	48998352	100	+	.	Parent=FBgn0037130.1.mrna1;Target=FBgn0037130.1 267 456 +
Chr1	stalkie_big_nohaplotig	exon	48998431	48998665	100	+	.	Parent=FBgn0037130.1.mrna1;Target=FBgn0037130.1 457 691 +
Chr1	stalkie_big_nohaplotig	CDS	48997813	48998078	.	+	0	Parent=FBgn0037130.1.mrna1;Target=FBgn0037130.1 1 266 +
Chr1	stalkie_big_nohaplotig	CDS	48998163	48998352	.	+	1	Parent=FBgn0037130.1.mrna1;Target=FBgn0037130.1 267 456 +
Chr1	stalkie_big_nohaplotig	CDS	48998431	48998665	.	+	0	Parent=FBgn0037130.1.mrna1;Target=FBgn0037130.1 457 691 +
Chr1	stalkie_big_nohaplotig	mRNA	49016083	49459354	.	-	.	ID=comp150735_c0_seq1.mrna1;geneID=comp150735_c0_seq1.path1;Name=comp150735_c0_seq1;Dir=indeterminatecoverage=88.3;identity=90.1;matches=1060;mismatches=71;indels=45;unknowns=0;Target=comp150735_c0_seq1 552 493 .;locus=RLOC_00007777
Chr1	stalkie_big_nohaplotig	exon	49016083	49016089	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1318 1312 .
Chr1	stalkie_big_nohaplotig	exon	49022973	49022980	75	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1311 1305 .
Chr1	stalkie_big_nohaplotig	exon	49037675	49037683	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1304 1296 .
Chr1	stalkie_big_nohaplotig	exon	49045027	49045035	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1295 1287 .
Chr1	stalkie_big_nohaplotig	exon	49058948	49058957	80	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1286 1277 .
Chr1	stalkie_big_nohaplotig	exon	49063093	49063102	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1276 1267 .
Chr1	stalkie_big_nohaplotig	exon	49067791	49067803	53	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1266 1258 .
Chr1	stalkie_big_nohaplotig	exon	49077909	49077916	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1229 1222 .
Chr1	stalkie_big_nohaplotig	exon	49107586	49107599	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1220 1207 .
Chr1	stalkie_big_nohaplotig	exon	49111374	49111387	71	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1206 1194 .
Chr1	stalkie_big_nohaplotig	exon	49114705	49114710	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1193 1188 .
Chr1	stalkie_big_nohaplotig	exon	49117689	49117696	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1187 1180 .
Chr1	stalkie_big_nohaplotig	exon	49122545	49122551	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1179 1173 .
Chr1	stalkie_big_nohaplotig	exon	49127223	49127236	78	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1172 1159 .
Chr1	stalkie_big_nohaplotig	exon	49130825	49130835	90	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1158 1148 .
Chr1	stalkie_big_nohaplotig	exon	49135302	49135305	75	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1147 1144 .
Chr1	stalkie_big_nohaplotig	exon	49143247	49143248	0	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1143 1142 .
Chr1	stalkie_big_nohaplotig	exon	49203562	49203564	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1141 1139 .
Chr1	stalkie_big_nohaplotig	exon	49221804	49221808	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1138 1134 .
Chr1	stalkie_big_nohaplotig	exon	49226823	49226829	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1133 1127 .
Chr1	stalkie_big_nohaplotig	exon	49228526	49228533	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1126 1119 .
Chr1	stalkie_big_nohaplotig	exon	49228657	49228658	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1118 1117 .
Chr1	stalkie_big_nohaplotig	exon	49230151	49230176	47	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1116 1064 .
Chr1	stalkie_big_nohaplotig	exon	49255521	49255529	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1063 1055 .
Chr1	stalkie_big_nohaplotig	exon	49261183	49261189	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1054 1048 .
Chr1	stalkie_big_nohaplotig	exon	49261470	49261474	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1047 1043 .
Chr1	stalkie_big_nohaplotig	exon	49269268	49269272	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1042 1038 .
Chr1	stalkie_big_nohaplotig	exon	49272497	49272502	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1037 1032 .
Chr1	stalkie_big_nohaplotig	exon	49288117	49288120	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1031 1028 .
Chr1	stalkie_big_nohaplotig	exon	49296104	49296108	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1027 1023 .
Chr1	stalkie_big_nohaplotig	exon	49318659	49318668	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 1007 998 .
Chr1	stalkie_big_nohaplotig	exon	49319721	49319730	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 997 988 .
Chr1	stalkie_big_nohaplotig	exon	49320534	49320541	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 987 980 .
Chr1	stalkie_big_nohaplotig	exon	49321780	49321825	58	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 975 935 .
Chr1	stalkie_big_nohaplotig	exon	49338640	49338643	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 934 931 .
Chr1	stalkie_big_nohaplotig	exon	49350454	49350459	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 930 925 .
Chr1	stalkie_big_nohaplotig	exon	49351135	49351136	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 924 923 .
Chr1	stalkie_big_nohaplotig	exon	49351191	49351192	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 922 921 .
Chr1	stalkie_big_nohaplotig	exon	49357863	49357874	83	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 920 909 .
Chr1	stalkie_big_nohaplotig	exon	49358965	49358968	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 908 905 .
Chr1	stalkie_big_nohaplotig	exon	49361232	49361238	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 904 898 .
Chr1	stalkie_big_nohaplotig	exon	49368031	49368035	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 897 893 .
Chr1	stalkie_big_nohaplotig	exon	49391547	49391558	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 838 827 .
Chr1	stalkie_big_nohaplotig	exon	49395005	49395009	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 826 822 .
Chr1	stalkie_big_nohaplotig	exon	49402712	49402720	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 821 813 .
Chr1	stalkie_big_nohaplotig	exon	49410177	49410189	76	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 812 800 .
Chr1	stalkie_big_nohaplotig	exon	49424687	49424697	81	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 799 789 .
Chr1	stalkie_big_nohaplotig	exon	49435615	49435620	100	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 788 783 .
Chr1	stalkie_big_nohaplotig	exon	49458634	49459354	94	-	.	Parent=comp150735_c0_seq1.mrna1;Target=comp150735_c0_seq1 726 1 .
Chr1	stalkie_big_nohaplotig	CDS	49458804	49458862	.	-	0	Parent=comp150735_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49228296	49229162	.	+	.	ID=FBgn0038213.1.mrna1;geneID=FBgn0038213.1.path1;Name=FBgn0038213.1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=857;mismatches=10;indels=0;unknowns=0;Target=FBgn0038213.1 867 1 .;locus=RLOC_00007777
Chr1	stalkie_big_nohaplotig	exon	49228296	49229162	98	+	.	Parent=FBgn0038213.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49228296	49229162	.	+	0	Parent=FBgn0038213.1.mrna1
Chr1	gffcl	locus	49119437	49119847	.	+	.	ID=RLOC_00007778;geneIDs=comp142815_c0_seq1.path1;transcripts=comp142815_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49119437	49119847	.	+	.	ID=comp142815_c0_seq1.mrna1;geneID=comp142815_c0_seq1.path1;Name=comp142815_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=403;mismatches=8;indels=0;unknowns=0;Target=comp142815_c0_seq1 411 1 .;CDS_Target=comp142815_c0_seq1 44 3 .;locus=RLOC_00007778
Chr1	stalkie_big_nohaplotig	exon	49119437	49119847	98	+	.	Parent=comp142815_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49119439	49119480	.	+	0	Parent=comp142815_c0_seq1.mrna1
Chr1	gffcl	locus	49121329	49122086	.	-	.	ID=RLOC_00007779;geneIDs=comp155655_c0_seq1.path1;transcripts=comp155655_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49121329	49122086	.	-	.	ID=comp155655_c0_seq1.mrna1;geneID=comp155655_c0_seq1.path1;Name=comp155655_c0_seq1;Dir=indeterminatecoverage=88.2;identity=90.2;matches=600;mismatches=56;indels=9;unknowns=0;Target=comp155655_c0_seq1 525 361 .;locus=RLOC_00007779
Chr1	stalkie_big_nohaplotig	exon	49121329	49121454	83	-	.	Parent=comp155655_c0_seq1.mrna1;Target=comp155655_c0_seq1 724 599 .
Chr1	stalkie_big_nohaplotig	exon	49121557	49122086	91	-	.	Parent=comp155655_c0_seq1.mrna1;Target=comp155655_c0_seq1 559 21 .
Chr1	stalkie_big_nohaplotig	CDS	49121591	49121755	.	-	0	Parent=comp155655_c0_seq1.mrna1
Chr1	gffcl	locus	49127848	49129237	.	-	.	ID=RLOC_00007780;geneIDs=comp159344_c2_seq1.path1;transcripts=comp159344_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49127848	49129237	.	-	.	ID=comp159344_c2_seq1.mrna1;geneID=comp159344_c2_seq1.path1;Name=comp159344_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1385;mismatches=5;indels=0;unknowns=0;Target=comp159344_c2_seq1 1390 1 .;CDS_Target=comp159344_c2_seq1 1389 1054 .;locus=RLOC_00007780
Chr1	stalkie_big_nohaplotig	exon	49127848	49129237	99	-	.	Parent=comp159344_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49127849	49128184	.	-	0	Parent=comp159344_c2_seq1.mrna1
Chr1	gffcl	locus	49130774	49132804	.	+	.	ID=RLOC_00007781;geneIDs=comp146630_c0_seq1.path1;transcripts=comp146630_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49130774	49132804	.	+	.	ID=comp146630_c0_seq1.mrna1;geneID=comp146630_c0_seq1.path1;Name=comp146630_c0_seq1;Dir=sensecoverage=100.0;identity=95.1;matches=1023;mismatches=42;indels=11;unknowns=0;locus=RLOC_00007781
Chr1	stalkie_big_nohaplotig	exon	49130774	49130796	100	+	.	Parent=comp146630_c0_seq1.mrna1;Target=comp146630_c0_seq1 1 23 +
Chr1	stalkie_big_nohaplotig	exon	49131628	49132196	99	+	.	Parent=comp146630_c0_seq1.mrna1;Target=comp146630_c0_seq1 24 593 +
Chr1	stalkie_big_nohaplotig	exon	49132324	49132804	89	+	.	Parent=comp146630_c0_seq1.mrna1;Target=comp146630_c0_seq1 602 1076 +
Chr1	stalkie_big_nohaplotig	CDS	49130775	49130796	.	+	0	Parent=comp146630_c0_seq1.mrna1;Target=comp146630_c0_seq1 2 23 +
Chr1	stalkie_big_nohaplotig	CDS	49131628	49131830	.	+	2	Parent=comp146630_c0_seq1.mrna1;Target=comp146630_c0_seq1 24 226 +
Chr1	gffcl	locus	49140120	49157023	.	+	.	ID=RLOC_00007782;geneIDs=comp156536_c0_seq1.path1;transcripts=comp156536_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49140120	49157023	.	+	.	ID=comp156536_c0_seq1.mrna1;geneID=comp156536_c0_seq1.path1;Name=comp156536_c0_seq1;Dir=antisensecoverage=100.0;identity=98.8;matches=637;mismatches=8;indels=0;unknowns=0;locus=RLOC_00007782
Chr1	stalkie_big_nohaplotig	exon	49140120	49140178	96	+	.	Parent=comp156536_c0_seq1.mrna1;Target=comp156536_c0_seq1 587 645 -
Chr1	stalkie_big_nohaplotig	exon	49143074	49143199	100	+	.	Parent=comp156536_c0_seq1.mrna1;Target=comp156536_c0_seq1 461 586 -
Chr1	stalkie_big_nohaplotig	exon	49143266	49143287	100	+	.	Parent=comp156536_c0_seq1.mrna1;Target=comp156536_c0_seq1 439 460 -
Chr1	stalkie_big_nohaplotig	exon	49156586	49157023	98	+	.	Parent=comp156536_c0_seq1.mrna1;Target=comp156536_c0_seq1 1 438 -
Chr1	stalkie_big_nohaplotig	CDS	49143091	49143199	.	+	0	Parent=comp156536_c0_seq1.mrna1;Target=comp156536_c0_seq1 461 569 .
Chr1	stalkie_big_nohaplotig	CDS	49143266	49143287	.	+	2	Parent=comp156536_c0_seq1.mrna1;Target=comp156536_c0_seq1 439 460 .
Chr1	stalkie_big_nohaplotig	CDS	49156586	49156814	.	+	1	Parent=comp156536_c0_seq1.mrna1;Target=comp156536_c0_seq1 210 438 .
Chr1	gffcl	locus	49177181	49179869	.	+	.	ID=RLOC_00007783;geneIDs=comp147202_c0_seq1.path1;transcripts=comp147202_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49177181	49179869	.	+	.	ID=comp147202_c0_seq1.mrna1;geneID=comp147202_c0_seq1.path1;Name=comp147202_c0_seq1;Dir=sensecoverage=100.0;identity=99.0;matches=481;mismatches=3;indels=2;unknowns=0;locus=RLOC_00007783
Chr1	stalkie_big_nohaplotig	exon	49177181	49177203	100	+	.	Parent=comp147202_c0_seq1.mrna1;Target=comp147202_c0_seq1 1 23 +
Chr1	stalkie_big_nohaplotig	exon	49179308	49179437	100	+	.	Parent=comp147202_c0_seq1.mrna1;Target=comp147202_c0_seq1 24 153 +
Chr1	stalkie_big_nohaplotig	exon	49179539	49179869	98	+	.	Parent=comp147202_c0_seq1.mrna1;Target=comp147202_c0_seq1 154 486 +
Chr1	stalkie_big_nohaplotig	CDS	49179323	49179437	.	+	0	Parent=comp147202_c0_seq1.mrna1;Target=comp147202_c0_seq1 39 153 +
Chr1	stalkie_big_nohaplotig	CDS	49179539	49179813	.	+	2	Parent=comp147202_c0_seq1.mrna1;Target=comp147202_c0_seq1 154 428 +
Chr1	gffcl	locus	49183510	49186116	.	+	.	ID=RLOC_00007785;geneIDs=comp161449_c0_seq1.path1;transcripts=comp161449_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49183510	49186116	.	+	.	ID=comp161449_c0_seq1.mrna1;geneID=comp161449_c0_seq1.path1;Name=comp161449_c0_seq1;Dir=sensecoverage=99.9;identity=93.5;matches=1104;mismatches=48;indels=29;unknowns=0;Target=comp161449_c0_seq1 933 1049 +;locus=RLOC_00007785
Chr1	stalkie_big_nohaplotig	exon	49183510	49183594	90	+	.	Parent=comp161449_c0_seq1.mrna1;Target=comp161449_c0_seq1 1 85 +
Chr1	stalkie_big_nohaplotig	exon	49183735	49184155	92	+	.	Parent=comp161449_c0_seq1.mrna1;Target=comp161449_c0_seq1 86 506 +
Chr1	stalkie_big_nohaplotig	exon	49184487	49184494	100	+	.	Parent=comp161449_c0_seq1.mrna1;Target=comp161449_c0_seq1 542 549 +
Chr1	stalkie_big_nohaplotig	exon	49184505	49184513	100	+	.	Parent=comp161449_c0_seq1.mrna1;Target=comp161449_c0_seq1 564 572 +
Chr1	stalkie_big_nohaplotig	exon	49184629	49184637	100	+	.	Parent=comp161449_c0_seq1.mrna1;Target=comp161449_c0_seq1 719 727 +
Chr1	stalkie_big_nohaplotig	exon	49184778	49184782	100	+	.	Parent=comp161449_c0_seq1.mrna1;Target=comp161449_c0_seq1 762 766 +
Chr1	stalkie_big_nohaplotig	exon	49185502	49186116	93	+	.	Parent=comp161449_c0_seq1.mrna1;Target=comp161449_c0_seq1 767 1410 +
Chr1	stalkie_big_nohaplotig	CDS	49185668	49185764	.	+	0	Parent=comp161449_c0_seq1.mrna1
Chr1	gffcl	locus	49187679	49188435	.	+	.	ID=RLOC_00007786;geneIDs=comp149610_c0_seq1.path1;transcripts=comp149610_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49187679	49188435	.	+	.	ID=comp149610_c0_seq1.mrna1;geneID=comp149610_c0_seq1.path1;Name=comp149610_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=689;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007786
Chr1	stalkie_big_nohaplotig	exon	49187679	49187930	100	+	.	Parent=comp149610_c0_seq1.mrna1;Target=comp149610_c0_seq1 439 690 -
Chr1	stalkie_big_nohaplotig	exon	49187998	49188435	99	+	.	Parent=comp149610_c0_seq1.mrna1;Target=comp149610_c0_seq1 1 438 -
Chr1	stalkie_big_nohaplotig	CDS	49187816	49187930	.	+	0	Parent=comp149610_c0_seq1.mrna1;Target=comp149610_c0_seq1 439 553 .
Chr1	stalkie_big_nohaplotig	CDS	49187998	49188365	.	+	2	Parent=comp149610_c0_seq1.mrna1;Target=comp149610_c0_seq1 71 438 .
Chr1	gffcl	locus	49193754	49194763	.	.	.	ID=RLOC_00007787;geneIDs=AGAP003812.2.path1,comp161659_c0_seq1.path1;transcripts=comp161659_c0_seq1.mrna1,AGAP003812.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49193754	49194763	.	-	.	ID=comp161659_c0_seq1.mrna1;geneID=comp161659_c0_seq1.path1;Name=comp161659_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1006;mismatches=4;indels=1;unknowns=0;Target=comp161659_c0_seq1 1011 1 .;CDS_Target=comp161659_c0_seq1 186 1 .;locus=RLOC_00007787
Chr1	stalkie_big_nohaplotig	exon	49193754	49194763	99	-	.	Parent=comp161659_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49194578	49194763	.	-	0	Parent=comp161659_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49193767	49194761	.	+	.	ID=AGAP003812.2.mrna1;geneID=AGAP003812.2.path1;Name=AGAP003812.2;Dir=sensecoverage=100.0;identity=99.5;matches=937;mismatches=4;indels=1;unknowns=0;Target=AGAP003812.2 3 71 +;locus=RLOC_00007787
Chr1	stalkie_big_nohaplotig	exon	49193767	49193916	99	+	.	Parent=AGAP003812.2.mrna1;Target=AGAP003812.2 1 151 +
Chr1	stalkie_big_nohaplotig	exon	49193971	49194761	99	+	.	Parent=AGAP003812.2.mrna1;Target=AGAP003812.2 152 942 +
Chr1	stalkie_big_nohaplotig	CDS	49193769	49193836	.	+	0	Parent=AGAP003812.2.mrna1
Chr1	gffcl	locus	49197345	49197421	.	+	.	ID=RLOC_00007788;geneIDs=comp615580_c0_seq1.path2;transcripts=comp615580_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	49197345	49197421	.	+	.	ID=comp615580_c0_seq1.mrna2;geneID=comp615580_c0_seq1.path2;Name=comp615580_c0_seq1;Dir=indeterminatecoverage=36.9;identity=88.3;matches=68;mismatches=7;indels=2;unknowns=0;Target=comp615580_c0_seq1 203 129 .;CDS_Target=comp615580_c0_seq1 201 130 .;locus=RLOC_00007788
Chr1	stalkie_big_nohaplotig	exon	49197345	49197421	88	+	.	Parent=comp615580_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	49197346	49197419	.	+	0	Parent=comp615580_c0_seq1.mrna2
Chr1	gffcl	locus	49201631	49202229	.	+	.	ID=RLOC_00007789;geneIDs=comp157202_c0_seq1.path1;transcripts=comp157202_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49201631	49202229	.	+	.	ID=comp157202_c0_seq1.mrna1;geneID=comp157202_c0_seq1.path1;Name=comp157202_c0_seq1;Dir=antisensecoverage=96.3;identity=98.9;matches=536;mismatches=5;indels=1;unknowns=0;Target=comp157202_c0_seq1 451 546 .;locus=RLOC_00007789
Chr1	stalkie_big_nohaplotig	exon	49201631	49201760	95	+	.	Parent=comp157202_c0_seq1.mrna1;Target=comp157202_c0_seq1 416 546 -
Chr1	stalkie_big_nohaplotig	exon	49201819	49202229	100	+	.	Parent=comp157202_c0_seq1.mrna1;Target=comp157202_c0_seq1 5 415 -
Chr1	stalkie_big_nohaplotig	CDS	49201631	49201725	.	+	0	Parent=comp157202_c0_seq1.mrna1
Chr1	gffcl	locus	49202712	49203367	.	+	.	ID=RLOC_00007790;geneIDs=comp154573_c0_seq1.path1;transcripts=comp154573_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49202712	49203367	.	+	.	ID=comp154573_c0_seq1.mrna1;geneID=comp154573_c0_seq1.path1;Name=comp154573_c0_seq1;Dir=indeterminatecoverage=90.9;identity=97.0;matches=636;mismatches=5;indels=15;unknowns=0;Target=comp154573_c0_seq1 641 1 .;CDS_Target=comp154573_c0_seq1 499 296 .;locus=RLOC_00007790
Chr1	stalkie_big_nohaplotig	exon	49202712	49203367	96	+	.	Parent=comp154573_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49203022	49203225	.	+	0	Parent=comp154573_c0_seq1.mrna1
Chr1	gffcl	locus	49209258	49209741	.	-	.	ID=RLOC_00007791;geneIDs=comp156843_c0_seq1.path1;transcripts=comp156843_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49209258	49209741	.	-	.	ID=comp156843_c0_seq1.mrna1;geneID=comp156843_c0_seq1.path1;Name=comp156843_c0_seq1;Dir=indeterminatecoverage=99.8;identity=94.5;matches=461;mismatches=16;indels=11;unknowns=0;Target=comp156843_c0_seq1 481 1 .;CDS_Target=comp156843_c0_seq1 405 346 .;locus=RLOC_00007791
Chr1	stalkie_big_nohaplotig	exon	49209258	49209741	94	-	.	Parent=comp156843_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49209334	49209392	.	-	0	Parent=comp156843_c0_seq1.mrna1
Chr1	gffcl	locus	49210449	49215904	.	-	.	ID=RLOC_00007792;geneIDs=FBgn0037117.1.path1;transcripts=FBgn0037117.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49210449	49215904	.	-	.	ID=FBgn0037117.1.mrna1;geneID=FBgn0037117.1.path1;Name=FBgn0037117.1;Dir=sensecoverage=100.0;identity=99.1;matches=4400;mismatches=40;indels=0;unknowns=0;locus=RLOC_00007792
Chr1	stalkie_big_nohaplotig	exon	49210449	49210694	100	-	.	Parent=FBgn0037117.1.mrna1;Target=FBgn0037117.1 4195 4440 +
Chr1	stalkie_big_nohaplotig	exon	49211598	49211714	97	-	.	Parent=FBgn0037117.1.mrna1;Target=FBgn0037117.1 4078 4194 +
Chr1	stalkie_big_nohaplotig	exon	49211774	49213909	98	-	.	Parent=FBgn0037117.1.mrna1;Target=FBgn0037117.1 1942 4077 +
Chr1	stalkie_big_nohaplotig	exon	49213964	49215904	99	-	.	Parent=FBgn0037117.1.mrna1;Target=FBgn0037117.1 1 1941 +
Chr1	stalkie_big_nohaplotig	CDS	49210449	49210694	.	-	0	Parent=FBgn0037117.1.mrna1;Target=FBgn0037117.1 4195 4440 +
Chr1	stalkie_big_nohaplotig	CDS	49211598	49211714	.	-	0	Parent=FBgn0037117.1.mrna1;Target=FBgn0037117.1 4078 4194 +
Chr1	stalkie_big_nohaplotig	CDS	49211774	49213909	.	-	0	Parent=FBgn0037117.1.mrna1;Target=FBgn0037117.1 1942 4077 +
Chr1	stalkie_big_nohaplotig	CDS	49213964	49215904	.	-	0	Parent=FBgn0037117.1.mrna1;Target=FBgn0037117.1 1 1941 +
Chr1	gffcl	locus	49216725	49227147	.	+	.	ID=RLOC_00007793;geneIDs=FBgn0037116.1.path1,comp163545_c0_seq1.path1;transcripts=comp163545_c0_seq1.mrna1,FBgn0037116.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49216725	49227147	.	+	.	ID=comp163545_c0_seq1.mrna1;geneID=comp163545_c0_seq1.path1;Name=comp163545_c0_seq1;Dir=sensecoverage=97.9;identity=99.6;matches=5316;mismatches=16;indels=3;unknowns=0;locus=RLOC_00007793
Chr1	stalkie_big_nohaplotig	exon	49216725	49217072	100	+	.	Parent=comp163545_c0_seq1.mrna1;Target=comp163545_c0_seq1 2 349 +
Chr1	stalkie_big_nohaplotig	exon	49218066	49218709	98	+	.	Parent=comp163545_c0_seq1.mrna1;Target=comp163545_c0_seq1 350 996 +
Chr1	stalkie_big_nohaplotig	exon	49218761	49220503	99	+	.	Parent=comp163545_c0_seq1.mrna1;Target=comp163545_c0_seq1 997 2739 +
Chr1	stalkie_big_nohaplotig	exon	49220562	49221019	100	+	.	Parent=comp163545_c0_seq1.mrna1;Target=comp163545_c0_seq1 2740 3197 +
Chr1	stalkie_big_nohaplotig	exon	49221079	49221221	100	+	.	Parent=comp163545_c0_seq1.mrna1;Target=comp163545_c0_seq1 3198 3340 +
Chr1	stalkie_big_nohaplotig	exon	49222608	49223225	100	+	.	Parent=comp163545_c0_seq1.mrna1;Target=comp163545_c0_seq1 3341 3958 +
Chr1	stalkie_big_nohaplotig	exon	49223280	49223771	100	+	.	Parent=comp163545_c0_seq1.mrna1;Target=comp163545_c0_seq1 3959 4450 +
Chr1	stalkie_big_nohaplotig	exon	49226120	49226271	99	+	.	Parent=comp163545_c0_seq1.mrna1;Target=comp163545_c0_seq1 4451 4602 +
Chr1	stalkie_big_nohaplotig	exon	49226346	49226521	100	+	.	Parent=comp163545_c0_seq1.mrna1;Target=comp163545_c0_seq1 4603 4778 +
Chr1	stalkie_big_nohaplotig	exon	49226590	49227147	99	+	.	Parent=comp163545_c0_seq1.mrna1;Target=comp163545_c0_seq1 4779 5336 +
Chr1	stalkie_big_nohaplotig	CDS	49218067	49218709	.	+	0	Parent=comp163545_c0_seq1.mrna1;Target=comp163545_c0_seq1 351 996 +
Chr1	stalkie_big_nohaplotig	CDS	49218761	49220503	.	+	2	Parent=comp163545_c0_seq1.mrna1;Target=comp163545_c0_seq1 997 2739 +
Chr1	stalkie_big_nohaplotig	CDS	49220562	49221019	.	+	2	Parent=comp163545_c0_seq1.mrna1;Target=comp163545_c0_seq1 2740 3197 +
Chr1	stalkie_big_nohaplotig	CDS	49221079	49221221	.	+	0	Parent=comp163545_c0_seq1.mrna1;Target=comp163545_c0_seq1 3198 3340 +
Chr1	stalkie_big_nohaplotig	CDS	49222608	49223225	.	+	1	Parent=comp163545_c0_seq1.mrna1;Target=comp163545_c0_seq1 3341 3958 +
Chr1	stalkie_big_nohaplotig	CDS	49223280	49223771	.	+	1	Parent=comp163545_c0_seq1.mrna1;Target=comp163545_c0_seq1 3959 4450 +
Chr1	stalkie_big_nohaplotig	CDS	49226120	49226271	.	+	1	Parent=comp163545_c0_seq1.mrna1;Target=comp163545_c0_seq1 4451 4602 +
Chr1	stalkie_big_nohaplotig	CDS	49226346	49226521	.	+	2	Parent=comp163545_c0_seq1.mrna1;Target=comp163545_c0_seq1 4603 4778 +
Chr1	stalkie_big_nohaplotig	CDS	49226590	49226634	.	+	0	Parent=comp163545_c0_seq1.mrna1;Target=comp163545_c0_seq1 4779 4823 +
Chr1	stalkie_big_nohaplotig	mRNA	49217950	49226631	.	+	.	ID=FBgn0037116.1.mrna1;geneID=FBgn0037116.1.path1;Name=FBgn0037116.1;Dir=sensecoverage=100.0;identity=99.6;matches=4489;mismatches=14;indels=3;unknowns=0;locus=RLOC_00007793
Chr1	stalkie_big_nohaplotig	exon	49217950	49217984	100	+	.	Parent=FBgn0037116.1.mrna1;Target=FBgn0037116.1 1 35 +
Chr1	stalkie_big_nohaplotig	exon	49218066	49218709	98	+	.	Parent=FBgn0037116.1.mrna1;Target=FBgn0037116.1 36 682 +
Chr1	stalkie_big_nohaplotig	exon	49218761	49220503	99	+	.	Parent=FBgn0037116.1.mrna1;Target=FBgn0037116.1 683 2425 +
Chr1	stalkie_big_nohaplotig	exon	49220562	49221019	100	+	.	Parent=FBgn0037116.1.mrna1;Target=FBgn0037116.1 2426 2883 +
Chr1	stalkie_big_nohaplotig	exon	49221079	49221221	100	+	.	Parent=FBgn0037116.1.mrna1;Target=FBgn0037116.1 2884 3026 +
Chr1	stalkie_big_nohaplotig	exon	49222608	49223225	100	+	.	Parent=FBgn0037116.1.mrna1;Target=FBgn0037116.1 3027 3644 +
Chr1	stalkie_big_nohaplotig	exon	49223280	49223771	100	+	.	Parent=FBgn0037116.1.mrna1;Target=FBgn0037116.1 3645 4136 +
Chr1	stalkie_big_nohaplotig	exon	49226120	49226271	99	+	.	Parent=FBgn0037116.1.mrna1;Target=FBgn0037116.1 4137 4288 +
Chr1	stalkie_big_nohaplotig	exon	49226346	49226521	100	+	.	Parent=FBgn0037116.1.mrna1;Target=FBgn0037116.1 4289 4464 +
Chr1	stalkie_big_nohaplotig	exon	49226590	49226631	100	+	.	Parent=FBgn0037116.1.mrna1;Target=FBgn0037116.1 4465 4506 +
Chr1	stalkie_big_nohaplotig	CDS	49217950	49217984	.	+	0	Parent=FBgn0037116.1.mrna1;Target=FBgn0037116.1 1 35 +
Chr1	stalkie_big_nohaplotig	CDS	49218066	49218709	.	+	1	Parent=FBgn0037116.1.mrna1;Target=FBgn0037116.1 36 682 +
Chr1	stalkie_big_nohaplotig	CDS	49218761	49220503	.	+	2	Parent=FBgn0037116.1.mrna1;Target=FBgn0037116.1 683 2425 +
Chr1	stalkie_big_nohaplotig	CDS	49220562	49221019	.	+	2	Parent=FBgn0037116.1.mrna1;Target=FBgn0037116.1 2426 2883 +
Chr1	stalkie_big_nohaplotig	CDS	49221079	49221221	.	+	0	Parent=FBgn0037116.1.mrna1;Target=FBgn0037116.1 2884 3026 +
Chr1	stalkie_big_nohaplotig	CDS	49222608	49223225	.	+	1	Parent=FBgn0037116.1.mrna1;Target=FBgn0037116.1 3027 3644 +
Chr1	stalkie_big_nohaplotig	CDS	49223280	49223771	.	+	1	Parent=FBgn0037116.1.mrna1;Target=FBgn0037116.1 3645 4136 +
Chr1	stalkie_big_nohaplotig	CDS	49226120	49226271	.	+	1	Parent=FBgn0037116.1.mrna1;Target=FBgn0037116.1 4137 4288 +
Chr1	stalkie_big_nohaplotig	CDS	49226346	49226521	.	+	2	Parent=FBgn0037116.1.mrna1;Target=FBgn0037116.1 4289 4464 +
Chr1	stalkie_big_nohaplotig	CDS	49226590	49226631	.	+	0	Parent=FBgn0037116.1.mrna1;Target=FBgn0037116.1 4465 4506 +
Chr1	gffcl	locus	49227165	49227719	.	+	.	ID=RLOC_00007794;geneIDs=comp147361_c0_seq1.path1;transcripts=comp147361_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49227165	49227719	.	+	.	ID=comp147361_c0_seq1.mrna1;geneID=comp147361_c0_seq1.path1;Name=comp147361_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.2;matches=545;mismatches=10;indels=0;unknowns=0;Target=comp147361_c0_seq1 555 1 .;CDS_Target=comp147361_c0_seq1 411 367 .;locus=RLOC_00007794
Chr1	stalkie_big_nohaplotig	exon	49227165	49227719	98	+	.	Parent=comp147361_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49227531	49227575	.	+	0	Parent=comp147361_c0_seq1.mrna1
Chr1	gffcl	locus	49232880	49254546	.	+	.	ID=RLOC_00007795;geneIDs=comp162814_c0_seq1.path1;transcripts=comp162814_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49232880	49254546	.	+	.	ID=comp162814_c0_seq1.mrna1;geneID=comp162814_c0_seq1.path1;Name=comp162814_c0_seq1;Dir=sensecoverage=99.4;identity=99.9;matches=1817;mismatches=2;indels=0;unknowns=0;Target=comp162814_c0_seq1 453 620 +;locus=RLOC_00007795
Chr1	stalkie_big_nohaplotig	exon	49232880	49233317	99	+	.	Parent=comp162814_c0_seq1.mrna1;Target=comp162814_c0_seq1 12 449 +
Chr1	stalkie_big_nohaplotig	exon	49233378	49233862	100	+	.	Parent=comp162814_c0_seq1.mrna1;Target=comp162814_c0_seq1 450 934 +
Chr1	stalkie_big_nohaplotig	exon	49233918	49234039	100	+	.	Parent=comp162814_c0_seq1.mrna1;Target=comp162814_c0_seq1 935 1056 +
Chr1	stalkie_big_nohaplotig	exon	49253773	49254546	100	+	.	Parent=comp162814_c0_seq1.mrna1;Target=comp162814_c0_seq1 1057 1830 +
Chr1	stalkie_big_nohaplotig	CDS	49233381	49233548	.	+	0	Parent=comp162814_c0_seq1.mrna1
Chr1	gffcl	locus	49236114	49236337	.	+	.	ID=RLOC_00007796;geneIDs=comp59676_c0_seq1.path1;transcripts=comp59676_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49236114	49236337	.	+	.	ID=comp59676_c0_seq1.mrna1;geneID=comp59676_c0_seq1.path1;Name=comp59676_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.5;matches=214;mismatches=9;indels=1;unknowns=0;Target=comp59676_c0_seq1 223 1 .;CDS_Target=comp59676_c0_seq1 223 152 .;locus=RLOC_00007796
Chr1	stalkie_big_nohaplotig	exon	49236114	49236337	95	+	.	Parent=comp59676_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49236265	49236337	.	+	0	Parent=comp59676_c0_seq1.mrna1
Chr1	gffcl	locus	49238141	49238688	.	+	.	ID=RLOC_00007797;geneIDs=comp147764_c1_seq1.path1;transcripts=comp147764_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49238141	49238688	.	+	.	ID=comp147764_c1_seq1.mrna1;geneID=comp147764_c1_seq1.path1;Name=comp147764_c1_seq1;Dir=indeterminatecoverage=99.6;identity=97.3;matches=533;mismatches=15;indels=0;unknowns=0;Target=comp147764_c1_seq1 550 3 .;CDS_Target=comp147764_c1_seq1 201 109 .;locus=RLOC_00007797
Chr1	stalkie_big_nohaplotig	exon	49238141	49238688	97	+	.	Parent=comp147764_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49238247	49238339	.	+	0	Parent=comp147764_c1_seq1.mrna1
Chr1	gffcl	locus	49245241	49245839	.	-	.	ID=RLOC_00007798;geneIDs=comp150534_c0_seq1.path1;transcripts=comp150534_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49245241	49245839	.	-	.	ID=comp150534_c0_seq1.mrna1;geneID=comp150534_c0_seq1.path1;Name=comp150534_c0_seq1;Dir=indeterminatecoverage=95.1;identity=99.3;matches=544;mismatches=3;indels=1;unknowns=0;Target=comp150534_c0_seq1 71 6 .;locus=RLOC_00007798
Chr1	stalkie_big_nohaplotig	exon	49245241	49245661	99	-	.	Parent=comp150534_c0_seq1.mrna1;Target=comp150534_c0_seq1 552 133 .
Chr1	stalkie_big_nohaplotig	exon	49245713	49245839	97	-	.	Parent=comp150534_c0_seq1.mrna1;Target=comp150534_c0_seq1 132 6 .
Chr1	stalkie_big_nohaplotig	CDS	49245774	49245839	.	-	0	Parent=comp150534_c0_seq1.mrna1
Chr1	gffcl	locus	49257881	49259236	.	-	.	ID=RLOC_00007799;geneIDs=FBgn0003884.3.path1,FBgn0003886.2.path1;transcripts=FBgn0003886.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49257881	49259236	.	-	.	ID=FBgn0003886.2.mrna1;geneID=FBgn0003886.2.path1;Name=FBgn0003886.2;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1350;mismatches=6;indels=0;unknowns=0;Target=FBgn0003886.2 1356 1 .;locus=RLOC_00007799
Chr1	stalkie_big_nohaplotig	exon	49257881	49259236	99	-	.	Parent=FBgn0003886.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49257881	49259236	.	-	0	Parent=FBgn0003886.2.mrna1
Chr1	gffcl	locus	49259798	49260246	.	+	.	ID=RLOC_00007800;geneIDs=comp147732_c0_seq1.path1;transcripts=comp147732_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49259798	49260246	.	+	.	ID=comp147732_c0_seq1.mrna1;geneID=comp147732_c0_seq1.path1;Name=comp147732_c0_seq1;Dir=indeterminatecoverage=94.0;identity=90.0;matches=404;mismatches=19;indels=26;unknowns=0;Target=comp147732_c0_seq1 450 28 .;CDS_Target=comp147732_c0_seq1 426 340 .;locus=RLOC_00007800
Chr1	stalkie_big_nohaplotig	exon	49259798	49260246	89	+	.	Parent=comp147732_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49260136	49260222	.	+	0	Parent=comp147732_c0_seq1.mrna1
Chr1	gffcl	locus	49262736	49264129	.	-	.	ID=RLOC_00007801;geneIDs=FBgn0003884.1.path1,FBgn0003884.4.path1;transcripts=FBgn0003884.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49262752	49264129	.	-	.	ID=FBgn0003884.4.mrna1;geneID=FBgn0003884.4.path1;Name=FBgn0003884.4;Dir=indeterminatecoverage=97.5;identity=96.5;matches=1330;mismatches=48;indels=0;unknowns=0;Target=FBgn0003884.4 1378 1 .;CDS_Target=FBgn0003884.4 1377 1 .;locus=RLOC_00007801
Chr1	stalkie_big_nohaplotig	exon	49262752	49264129	96	-	.	Parent=FBgn0003884.4.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49262753	49264129	.	-	0	Parent=FBgn0003884.4.mrna1
Chr1	gffcl	locus	49293880	49294636	.	-	.	ID=RLOC_00007802;geneIDs=comp148212_c1_seq1.path2;transcripts=comp148212_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	49293880	49294636	.	-	.	ID=comp148212_c1_seq1.mrna2;geneID=comp148212_c1_seq1.path2;Name=comp148212_c1_seq1;Dir=indeterminatecoverage=95.3;identity=98.8;matches=749;mismatches=8;indels=1;unknowns=0;Target=comp148212_c1_seq1 795 38 .;CDS_Target=comp148212_c1_seq1 795 475 .;locus=RLOC_00007802
Chr1	stalkie_big_nohaplotig	exon	49293880	49294636	98	-	.	Parent=comp148212_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	49293880	49294200	.	-	0	Parent=comp148212_c1_seq1.mrna2
Chr1	gffcl	locus	49331251	49332091	.	-	.	ID=RLOC_00007803;geneIDs=comp150908_c0_seq1.path1;transcripts=comp150908_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49331251	49332091	.	-	.	ID=comp150908_c0_seq1.mrna1;geneID=comp150908_c0_seq1.path1;Name=comp150908_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=840;mismatches=1;indels=0;unknowns=0;Target=comp150908_c0_seq1 841 1 .;CDS_Target=comp150908_c0_seq1 617 3 .;locus=RLOC_00007803
Chr1	stalkie_big_nohaplotig	exon	49331251	49332091	99	-	.	Parent=comp150908_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49331475	49332089	.	-	0	Parent=comp150908_c0_seq1.mrna1
Chr1	gffcl	locus	49338961	49339845	.	+	.	ID=RLOC_00007804;geneIDs=Dv_FBgn0198503.1.path1;transcripts=Dv_FBgn0198503.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49338961	49339845	.	+	.	ID=Dv_FBgn0198503.1.mrna1;geneID=Dv_FBgn0198503.1.path1;Name=Dv_FBgn0198503.1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=877;mismatches=8;indels=0;unknowns=0;Target=Dv_FBgn0198503.1 885 1 .;locus=RLOC_00007804
Chr1	stalkie_big_nohaplotig	exon	49338961	49339845	99	+	.	Parent=Dv_FBgn0198503.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49338961	49339845	.	+	0	Parent=Dv_FBgn0198503.1.mrna1
Chr1	gffcl	locus	49365067	49365921	.	-	.	ID=RLOC_00007805;geneIDs=ORF2462.path1;transcripts=ORF2462.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49365067	49365921	.	-	.	ID=ORF2462.mrna1;geneID=ORF2462.path1;Name=ORF2462;Dir=indeterminatecoverage=100.0;identity=98.8;matches=845;mismatches=10;indels=0;unknowns=0;Target=ORF2462 855 1 .;locus=RLOC_00007805
Chr1	stalkie_big_nohaplotig	exon	49365067	49365921	98	-	.	Parent=ORF2462.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49365067	49365921	.	-	0	Parent=ORF2462.mrna1
Chr1	gffcl	locus	49369007	49370386	.	+	.	ID=RLOC_00007806;geneIDs=FBgn0003886.1.path1;transcripts=FBgn0003886.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49369007	49370386	.	+	.	ID=FBgn0003886.1.mrna1;geneID=FBgn0003886.1.path1;Name=FBgn0003886.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1377;mismatches=3;indels=0;unknowns=0;Target=FBgn0003886.1 1380 1 .;locus=RLOC_00007806
Chr1	stalkie_big_nohaplotig	exon	49369007	49370386	99	+	.	Parent=FBgn0003886.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49369007	49370386	.	+	0	Parent=FBgn0003886.1.mrna1
Chr1	gffcl	locus	49383320	49421009	.	-	.	ID=RLOC_00007807;geneIDs=FBgn0037130.1.path2;transcripts=FBgn0037130.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	49383320	49421009	.	-	.	ID=FBgn0037130.1.mrna2;geneID=FBgn0037130.1.path2;Name=FBgn0037130.1;Dir=sensecoverage=62.1;identity=99.8;matches=1111;mismatches=2;indels=0;unknowns=17;locus=RLOC_00007807
Chr1	stalkie_big_nohaplotig	exon	49383320	49383400	100	-	.	Parent=FBgn0037130.1.mrna2;Target=FBgn0037130.1 1741 1821 +
Chr1	stalkie_big_nohaplotig	exon	49392629	49392982	100	-	.	Parent=FBgn0037130.1.mrna2;Target=FBgn0037130.1 1387 1740 +
Chr1	stalkie_big_nohaplotig	exon	49393362	49393470	100	-	.	Parent=FBgn0037130.1.mrna2;Target=FBgn0037130.1 1278 1386 +
Chr1	stalkie_big_nohaplotig	exon	49405023	49405108	97	-	.	Parent=FBgn0037130.1.mrna2;Target=FBgn0037130.1 1192 1277 +
Chr1	stalkie_big_nohaplotig	exon	49405164	49405453	100	-	.	Parent=FBgn0037130.1.mrna2;Target=FBgn0037130.1 902 1191 +
Chr1	stalkie_big_nohaplotig	exon	49420800	49421009	100	-	.	Parent=FBgn0037130.1.mrna2;Target=FBgn0037130.1 692 901 +
Chr1	stalkie_big_nohaplotig	CDS	49383320	49383400	.	-	2	Parent=FBgn0037130.1.mrna2;Target=FBgn0037130.1 1741 1821 +
Chr1	stalkie_big_nohaplotig	CDS	49392629	49392982	.	-	2	Parent=FBgn0037130.1.mrna2;Target=FBgn0037130.1 1387 1740 +
Chr1	stalkie_big_nohaplotig	CDS	49393362	49393470	.	-	0	Parent=FBgn0037130.1.mrna2;Target=FBgn0037130.1 1278 1386 +
Chr1	stalkie_big_nohaplotig	CDS	49405023	49405108	.	-	2	Parent=FBgn0037130.1.mrna2;Target=FBgn0037130.1 1192 1277 +
Chr1	stalkie_big_nohaplotig	CDS	49405164	49405453	.	-	1	Parent=FBgn0037130.1.mrna2;Target=FBgn0037130.1 902 1191 +
Chr1	stalkie_big_nohaplotig	CDS	49420800	49421009	.	-	1	Parent=FBgn0037130.1.mrna2;Target=FBgn0037130.1 692 901 +
Chr1	gffcl	locus	49413290	51313269	.	+	.	ID=RLOC_00007808;geneIDs=comp136581_c0_seq1.path1;transcripts=comp136581_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49413290	51313269	.	+	.	ID=comp136581_c0_seq1.mrna1;geneID=comp136581_c0_seq1.path1;Name=comp136581_c0_seq1;Dir=indeterminatecoverage=98.1;identity=93.8;matches=473;mismatches=19;indels=12;unknowns=0;Target=comp136581_c0_seq1 137 3 .;locus=RLOC_00007808
Chr1	stalkie_big_nohaplotig	exon	49413290	49413703	94	+	.	Parent=comp136581_c0_seq1.mrna1;Target=comp136581_c0_seq1 417 1 .
Chr1	stalkie_big_nohaplotig	exon	49414305	49414332	92	+	.	Parent=comp136581_c0_seq1.mrna1;Target=comp136581_c0_seq1 445 418 .
Chr1	stalkie_big_nohaplotig	exon	51276913	51276917	100	+	.	Parent=comp136581_c0_seq1.mrna1;Target=comp136581_c0_seq1 450 446 .
Chr1	stalkie_big_nohaplotig	exon	51281482	51281490	100	+	.	Parent=comp136581_c0_seq1.mrna1;Target=comp136581_c0_seq1 459 451 .
Chr1	stalkie_big_nohaplotig	exon	51282290	51282291	100	+	.	Parent=comp136581_c0_seq1.mrna1;Target=comp136581_c0_seq1 467 466 .
Chr1	stalkie_big_nohaplotig	exon	51283923	51283936	64	+	.	Parent=comp136581_c0_seq1.mrna1;Target=comp136581_c0_seq1 476 468 .
Chr1	stalkie_big_nohaplotig	exon	51285013	51285017	100	+	.	Parent=comp136581_c0_seq1.mrna1;Target=comp136581_c0_seq1 481 477 .
Chr1	stalkie_big_nohaplotig	exon	51300845	51300847	100	+	.	Parent=comp136581_c0_seq1.mrna1;Target=comp136581_c0_seq1 484 482 .
Chr1	stalkie_big_nohaplotig	exon	51306852	51306855	100	+	.	Parent=comp136581_c0_seq1.mrna1;Target=comp136581_c0_seq1 488 485 .
Chr1	stalkie_big_nohaplotig	exon	51313255	51313269	100	+	.	Parent=comp136581_c0_seq1.mrna1;Target=comp136581_c0_seq1 503 489 .
Chr1	stalkie_big_nohaplotig	CDS	49413292	49413426	.	+	0	Parent=comp136581_c0_seq1.mrna1
Chr1	gffcl	locus	49439618	49440549	.	+	.	ID=RLOC_00007810;geneIDs=comp168461_c0_seq1.path1;transcripts=comp168461_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49439618	49440549	.	+	.	ID=comp168461_c0_seq1.mrna1;geneID=comp168461_c0_seq1.path1;Name=comp168461_c0_seq1;Dir=sensecoverage=99.6;identity=99.9;matches=791;mismatches=0;indels=1;unknowns=0;locus=RLOC_00007810
Chr1	stalkie_big_nohaplotig	exon	49439618	49439853	99	+	.	Parent=comp168461_c0_seq1.mrna1;Target=comp168461_c0_seq1 2 236 +
Chr1	stalkie_big_nohaplotig	exon	49439912	49440212	100	+	.	Parent=comp168461_c0_seq1.mrna1;Target=comp168461_c0_seq1 237 537 +
Chr1	stalkie_big_nohaplotig	exon	49440295	49440549	100	+	.	Parent=comp168461_c0_seq1.mrna1;Target=comp168461_c0_seq1 538 792 +
Chr1	stalkie_big_nohaplotig	CDS	49439807	49439853	.	+	0	Parent=comp168461_c0_seq1.mrna1;Target=comp168461_c0_seq1 190 236 +
Chr1	stalkie_big_nohaplotig	CDS	49439912	49440212	.	+	1	Parent=comp168461_c0_seq1.mrna1;Target=comp168461_c0_seq1 237 537 +
Chr1	stalkie_big_nohaplotig	CDS	49440295	49440393	.	+	0	Parent=comp168461_c0_seq1.mrna1;Target=comp168461_c0_seq1 538 636 +
Chr1	gffcl	locus	49459645	49462658	.	+	.	ID=RLOC_00007812;geneIDs=ORF3278.path1,comp161002_c0_seq1.path1;transcripts=comp161002_c0_seq1.mrna1,ORF3278.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49459645	49462658	.	+	.	ID=comp161002_c0_seq1.mrna1;geneID=comp161002_c0_seq1.path1;Name=comp161002_c0_seq1;Dir=sensecoverage=100.0;identity=98.5;matches=1463;mismatches=20;indels=2;unknowns=0;locus=RLOC_00007812
Chr1	stalkie_big_nohaplotig	exon	49459645	49459711	97	+	.	Parent=comp161002_c0_seq1.mrna1;Target=comp161002_c0_seq1 1 67 +
Chr1	stalkie_big_nohaplotig	exon	49460235	49460304	98	+	.	Parent=comp161002_c0_seq1.mrna1;Target=comp161002_c0_seq1 68 137 +
Chr1	stalkie_big_nohaplotig	exon	49460354	49460467	100	+	.	Parent=comp161002_c0_seq1.mrna1;Target=comp161002_c0_seq1 138 251 +
Chr1	stalkie_big_nohaplotig	exon	49461073	49461254	97	+	.	Parent=comp161002_c0_seq1.mrna1;Target=comp161002_c0_seq1 252 433 +
Chr1	stalkie_big_nohaplotig	exon	49461370	49461489	100	+	.	Parent=comp161002_c0_seq1.mrna1;Target=comp161002_c0_seq1 434 553 +
Chr1	stalkie_big_nohaplotig	exon	49461599	49461890	100	+	.	Parent=comp161002_c0_seq1.mrna1;Target=comp161002_c0_seq1 554 845 +
Chr1	stalkie_big_nohaplotig	exon	49461958	49462086	100	+	.	Parent=comp161002_c0_seq1.mrna1;Target=comp161002_c0_seq1 846 974 +
Chr1	stalkie_big_nohaplotig	exon	49462148	49462658	97	+	.	Parent=comp161002_c0_seq1.mrna1;Target=comp161002_c0_seq1 975 1483 +
Chr1	stalkie_big_nohaplotig	CDS	49461861	49461890	.	+	0	Parent=comp161002_c0_seq1.mrna1;Target=comp161002_c0_seq1 816 845 +
Chr1	stalkie_big_nohaplotig	CDS	49461958	49462086	.	+	0	Parent=comp161002_c0_seq1.mrna1;Target=comp161002_c0_seq1 846 974 +
Chr1	stalkie_big_nohaplotig	CDS	49462148	49462291	.	+	0	Parent=comp161002_c0_seq1.mrna1;Target=comp161002_c0_seq1 975 1118 +
Chr1	stalkie_big_nohaplotig	mRNA	49461073	49462288	.	+	.	ID=ORF3278.mrna1;geneID=ORF3278.path1;Name=ORF3278;Dir=sensecoverage=99.2;identity=99.5;matches=740;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007812
Chr1	stalkie_big_nohaplotig	exon	49461073	49461254	97	+	.	Parent=ORF3278.mrna1;Target=ORF3278 7 188 +
Chr1	stalkie_big_nohaplotig	exon	49461599	49461890	100	+	.	Parent=ORF3278.mrna1;Target=ORF3278 189 480 +
Chr1	stalkie_big_nohaplotig	exon	49461958	49462086	100	+	.	Parent=ORF3278.mrna1;Target=ORF3278 481 609 +
Chr1	stalkie_big_nohaplotig	exon	49462148	49462288	100	+	.	Parent=ORF3278.mrna1;Target=ORF3278 610 750 +
Chr1	stalkie_big_nohaplotig	CDS	49461073	49461254	.	+	0	Parent=ORF3278.mrna1;Target=ORF3278 7 188 +
Chr1	stalkie_big_nohaplotig	CDS	49461599	49461890	.	+	1	Parent=ORF3278.mrna1;Target=ORF3278 189 480 +
Chr1	stalkie_big_nohaplotig	CDS	49461958	49462086	.	+	0	Parent=ORF3278.mrna1;Target=ORF3278 481 609 +
Chr1	stalkie_big_nohaplotig	CDS	49462148	49462288	.	+	0	Parent=ORF3278.mrna1;Target=ORF3278 610 750 +
Chr1	gffcl	locus	49496643	49499327	.	+	.	ID=RLOC_00007813;geneIDs=comp160259_c0_seq1.path3;transcripts=comp160259_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	49496643	49499327	.	+	.	ID=comp160259_c0_seq1.mrna3;geneID=comp160259_c0_seq1.path3;Name=comp160259_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=991;mismatches=15;indels=15;unknowns=0;Target=comp160259_c0_seq1 909 847 .;locus=RLOC_00007813
Chr1	stalkie_big_nohaplotig	exon	49496643	49496863	90	+	.	Parent=comp160259_c0_seq1.mrna3;Target=comp160259_c0_seq1 207 1 .
Chr1	stalkie_big_nohaplotig	exon	49498529	49499327	99	+	.	Parent=comp160259_c0_seq1.mrna3;Target=comp160259_c0_seq1 1007 208 .
Chr1	stalkie_big_nohaplotig	CDS	49499168	49499229	.	+	0	Parent=comp160259_c0_seq1.mrna3
Chr1	gffcl	locus	49524704	49527050	.	-	.	ID=RLOC_00007814;geneIDs=comp160663_c0_seq1.path1;transcripts=comp160663_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49524704	49527050	.	-	.	ID=comp160663_c0_seq1.mrna1;geneID=comp160663_c0_seq1.path1;Name=comp160663_c0_seq1;Dir=sensecoverage=99.9;identity=96.9;matches=1267;mismatches=40;indels=1;unknowns=0;locus=RLOC_00007814
Chr1	stalkie_big_nohaplotig	exon	49524704	49525273	94	-	.	Parent=comp160663_c0_seq1.mrna1;Target=comp160663_c0_seq1 829 1397 +
Chr1	stalkie_big_nohaplotig	exon	49525752	49525759	100	-	.	Parent=comp160663_c0_seq1.mrna1;Target=comp160663_c0_seq1 769 776 +
Chr1	stalkie_big_nohaplotig	exon	49526268	49526745	98	-	.	Parent=comp160663_c0_seq1.mrna1;Target=comp160663_c0_seq1 253 730 +
Chr1	stalkie_big_nohaplotig	exon	49526799	49527050	98	-	.	Parent=comp160663_c0_seq1.mrna1;Target=comp160663_c0_seq1 1 252 +
Chr1	stalkie_big_nohaplotig	CDS	49524755	49525273	.	-	2	Parent=comp160663_c0_seq1.mrna1;Target=comp160663_c0_seq1 829 1346 +
Chr1	stalkie_big_nohaplotig	CDS	49525752	49525759	.	-	1	Parent=comp160663_c0_seq1.mrna1;Target=comp160663_c0_seq1 769 776 +
Chr1	stalkie_big_nohaplotig	CDS	49526268	49526745	.	-	2	Parent=comp160663_c0_seq1.mrna1;Target=comp160663_c0_seq1 253 730 +
Chr1	stalkie_big_nohaplotig	CDS	49526799	49526877	.	-	0	Parent=comp160663_c0_seq1.mrna1;Target=comp160663_c0_seq1 174 252 +
Chr1	gffcl	locus	49588355	49588875	.	-	.	ID=RLOC_00007815;geneIDs=comp108214_c1_seq1.path1;transcripts=comp108214_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49588355	49588875	.	-	.	ID=comp108214_c1_seq1.mrna1;geneID=comp108214_c1_seq1.path1;Name=comp108214_c1_seq1;Dir=indeterminatecoverage=96.5;identity=100.0;matches=521;mismatches=0;indels=0;unknowns=0;Target=comp108214_c1_seq1 540 20 .;CDS_Target=comp108214_c1_seq1 130 20 .;locus=RLOC_00007815
Chr1	stalkie_big_nohaplotig	exon	49588355	49588875	100	-	.	Parent=comp108214_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49588765	49588875	.	-	0	Parent=comp108214_c1_seq1.mrna1
Chr1	gffcl	locus	49701697	49702026	.	+	.	ID=RLOC_00007816;geneIDs=comp149883_c0_seq1.path1;transcripts=comp149883_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49701697	49702026	.	+	.	ID=comp149883_c0_seq1.mrna1;geneID=comp149883_c0_seq1.path1;Name=comp149883_c0_seq1;Dir=indeterminatecoverage=96.9;identity=93.4;matches=324;mismatches=6;indels=17;unknowns=0;Target=comp149883_c0_seq1 347 1 .;CDS_Target=comp149883_c0_seq1 98 39 .;locus=RLOC_00007816
Chr1	stalkie_big_nohaplotig	exon	49701697	49702026	93	+	.	Parent=comp149883_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49701735	49701794	.	+	0	Parent=comp149883_c0_seq1.mrna1
Chr1	gffcl	locus	49702611	49703565	.	+	.	ID=RLOC_00007817;geneIDs=comp158724_c0_seq1.path1;transcripts=comp158724_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49702611	49703565	.	+	.	ID=comp158724_c0_seq1.mrna1;geneID=comp158724_c0_seq1.path1;Name=comp158724_c0_seq1;Dir=indeterminatecoverage=99.0;identity=91.8;matches=912;mismatches=36;indels=45;unknowns=0;Target=comp158724_c0_seq1 996 11 .;CDS_Target=comp158724_c0_seq1 427 242 .;locus=RLOC_00007817
Chr1	stalkie_big_nohaplotig	exon	49702611	49703565	91	+	.	Parent=comp158724_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49702842	49703029	.	+	0	Parent=comp158724_c0_seq1.mrna1
Chr1	gffcl	locus	49705107	49708722	.	-	.	ID=RLOC_00007818;geneIDs=FBgn0037120.1.path1;transcripts=FBgn0037120.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49705107	49708722	.	-	.	ID=FBgn0037120.1.mrna1;geneID=FBgn0037120.1.path1;Name=FBgn0037120.1;Dir=sensecoverage=100.0;identity=99.7;matches=1265;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007818
Chr1	stalkie_big_nohaplotig	exon	49705107	49705301	98	-	.	Parent=FBgn0037120.1.mrna1;Target=FBgn0037120.1 1075 1269 +
Chr1	stalkie_big_nohaplotig	exon	49707590	49707982	99	-	.	Parent=FBgn0037120.1.mrna1;Target=FBgn0037120.1 682 1074 +
Chr1	stalkie_big_nohaplotig	exon	49708042	49708722	100	-	.	Parent=FBgn0037120.1.mrna1;Target=FBgn0037120.1 1 681 +
Chr1	stalkie_big_nohaplotig	CDS	49705107	49705301	.	-	0	Parent=FBgn0037120.1.mrna1;Target=FBgn0037120.1 1075 1269 +
Chr1	stalkie_big_nohaplotig	CDS	49707590	49707982	.	-	0	Parent=FBgn0037120.1.mrna1;Target=FBgn0037120.1 682 1074 +
Chr1	stalkie_big_nohaplotig	CDS	49708042	49708722	.	-	0	Parent=FBgn0037120.1.mrna1;Target=FBgn0037120.1 1 681 +
Chr1	gffcl	locus	49738981	49740328	.	+	.	ID=RLOC_00007819;geneIDs=comp162915_c0_seq1.path1;transcripts=comp162915_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49738981	49740328	.	+	.	ID=comp162915_c0_seq1.mrna1;geneID=comp162915_c0_seq1.path1;Name=comp162915_c0_seq1;Dir=indeterminatecoverage=99.3;identity=95.3;matches=1300;mismatches=45;indels=19;unknowns=0;Target=comp162915_c0_seq1 1361 1 .;CDS_Target=comp162915_c0_seq1 547 284 .;locus=RLOC_00007819
Chr1	stalkie_big_nohaplotig	exon	49738981	49740328	95	+	.	Parent=comp162915_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49739253	49739516	.	+	0	Parent=comp162915_c0_seq1.mrna1
Chr1	gffcl	locus	49743258	49744889	.	-	.	ID=RLOC_00007820;geneIDs=ORF590.path1;transcripts=ORF590.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49743258	49744889	.	-	.	ID=ORF590.mrna1;geneID=ORF590.path1;Name=ORF590;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1616;mismatches=16;indels=0;unknowns=0;Target=ORF590 1632 1 .;locus=RLOC_00007820
Chr1	stalkie_big_nohaplotig	exon	49743258	49744889	99	-	.	Parent=ORF590.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49743258	49744889	.	-	0	Parent=ORF590.mrna1
Chr1	gffcl	locus	49751423	49752531	.	+	.	ID=RLOC_00007821;geneIDs=ORF1894.path1;transcripts=ORF1894.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49751423	49752531	.	+	.	ID=ORF1894.mrna1;geneID=ORF1894.path1;Name=ORF1894;Dir=sensecoverage=100.0;identity=97.9;matches=946;mismatches=20;indels=0;unknowns=0;locus=RLOC_00007821
Chr1	stalkie_big_nohaplotig	exon	49751423	49751481	100	+	.	Parent=ORF1894.mrna1;Target=ORF1894 1 59 +
Chr1	stalkie_big_nohaplotig	exon	49751625	49752531	97	+	.	Parent=ORF1894.mrna1;Target=ORF1894 60 966 +
Chr1	stalkie_big_nohaplotig	CDS	49751423	49751481	.	+	0	Parent=ORF1894.mrna1;Target=ORF1894 1 59 +
Chr1	stalkie_big_nohaplotig	CDS	49751625	49752531	.	+	1	Parent=ORF1894.mrna1;Target=ORF1894 60 966 +
Chr1	gffcl	locus	49753745	49754157	.	-	.	ID=RLOC_00007822;geneIDs=FBgn0037121.1.path1;transcripts=FBgn0037121.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49753745	49754157	.	-	.	ID=FBgn0037121.1.mrna1;geneID=FBgn0037121.1.path1;Name=FBgn0037121.1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=410;mismatches=3;indels=1;unknowns=0;Target=FBgn0037121.1 414 1 .;CDS_Target=FBgn0037121.1 32 3 .;locus=RLOC_00007822
Chr1	stalkie_big_nohaplotig	exon	49753745	49754157	99	-	.	Parent=FBgn0037121.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49754127	49754155	.	-	0	Parent=FBgn0037121.1.mrna1
Chr1	gffcl	locus	49797699	49798269	.	+	.	ID=RLOC_00007823;geneIDs=FBgn0037114.1.path1;transcripts=FBgn0037114.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49797699	49798269	.	+	.	ID=FBgn0037114.1.mrna1;geneID=FBgn0037114.1.path1;Name=FBgn0037114.1;Dir=sensecoverage=100.0;identity=99.3;matches=453;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007823
Chr1	stalkie_big_nohaplotig	exon	49797699	49797758	100	+	.	Parent=FBgn0037114.1.mrna1;Target=FBgn0037114.1 1 60 +
Chr1	stalkie_big_nohaplotig	exon	49797874	49798269	99	+	.	Parent=FBgn0037114.1.mrna1;Target=FBgn0037114.1 61 456 +
Chr1	stalkie_big_nohaplotig	CDS	49797699	49797758	.	+	0	Parent=FBgn0037114.1.mrna1;Target=FBgn0037114.1 1 60 +
Chr1	stalkie_big_nohaplotig	CDS	49797874	49798269	.	+	0	Parent=FBgn0037114.1.mrna1;Target=FBgn0037114.1 61 456 +
Chr1	gffcl	locus	49827392	49828676	.	+	.	ID=RLOC_00007825;geneIDs=FBgn0032424.1.path1;transcripts=FBgn0032424.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49827392	49828676	.	+	.	ID=FBgn0032424.1.mrna1;geneID=FBgn0032424.1.path1;Name=FBgn0032424.1;Dir=sensecoverage=100.0;identity=99.5;matches=964;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007825
Chr1	stalkie_big_nohaplotig	exon	49827392	49827456	100	+	.	Parent=FBgn0032424.1.mrna1;Target=FBgn0032424.1 1 65 +
Chr1	stalkie_big_nohaplotig	exon	49827521	49827653	100	+	.	Parent=FBgn0032424.1.mrna1;Target=FBgn0032424.1 66 198 +
Chr1	stalkie_big_nohaplotig	exon	49827712	49827801	100	+	.	Parent=FBgn0032424.1.mrna1;Target=FBgn0032424.1 199 288 +
Chr1	stalkie_big_nohaplotig	exon	49827865	49827993	100	+	.	Parent=FBgn0032424.1.mrna1;Target=FBgn0032424.1 289 417 +
Chr1	stalkie_big_nohaplotig	exon	49828058	49828251	100	+	.	Parent=FBgn0032424.1.mrna1;Target=FBgn0032424.1 418 611 +
Chr1	stalkie_big_nohaplotig	exon	49828319	49828676	98	+	.	Parent=FBgn0032424.1.mrna1;Target=FBgn0032424.1 612 969 +
Chr1	stalkie_big_nohaplotig	CDS	49827392	49827456	.	+	0	Parent=FBgn0032424.1.mrna1;Target=FBgn0032424.1 1 65 +
Chr1	stalkie_big_nohaplotig	CDS	49827521	49827653	.	+	1	Parent=FBgn0032424.1.mrna1;Target=FBgn0032424.1 66 198 +
Chr1	stalkie_big_nohaplotig	CDS	49827712	49827801	.	+	0	Parent=FBgn0032424.1.mrna1;Target=FBgn0032424.1 199 288 +
Chr1	stalkie_big_nohaplotig	CDS	49827865	49827993	.	+	0	Parent=FBgn0032424.1.mrna1;Target=FBgn0032424.1 289 417 +
Chr1	stalkie_big_nohaplotig	CDS	49828058	49828251	.	+	0	Parent=FBgn0032424.1.mrna1;Target=FBgn0032424.1 418 611 +
Chr1	stalkie_big_nohaplotig	CDS	49828319	49828676	.	+	1	Parent=FBgn0032424.1.mrna1;Target=FBgn0032424.1 612 969 +
Chr1	gffcl	locus	49845420	49912291	.	-	.	ID=RLOC_00007826;geneIDs=comp142117_c0_seq1.path1;transcripts=comp142117_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49845420	49912291	.	-	.	ID=comp142117_c0_seq1.mrna1;geneID=comp142117_c0_seq1.path1;Name=comp142117_c0_seq1;Dir=antisensecoverage=99.5;identity=99.4;matches=635;mismatches=1;indels=3;unknowns=0;Target=comp142117_c0_seq1 2 268 .;locus=RLOC_00007826
Chr1	stalkie_big_nohaplotig	exon	49845420	49845728	99	-	.	Parent=comp142117_c0_seq1.mrna1;Target=comp142117_c0_seq1 1 306 -
Chr1	stalkie_big_nohaplotig	exon	49871580	49871655	100	-	.	Parent=comp142117_c0_seq1.mrna1;Target=comp142117_c0_seq1 307 382 -
Chr1	stalkie_big_nohaplotig	exon	49883336	49883519	100	-	.	Parent=comp142117_c0_seq1.mrna1;Target=comp142117_c0_seq1 383 566 -
Chr1	stalkie_big_nohaplotig	exon	49912222	49912291	98	-	.	Parent=comp142117_c0_seq1.mrna1;Target=comp142117_c0_seq1 567 636 -
Chr1	stalkie_big_nohaplotig	CDS	49845421	49845690	.	-	0	Parent=comp142117_c0_seq1.mrna1
Chr1	gffcl	locus	49958246	49959086	.	+	.	ID=RLOC_00007827;geneIDs=comp149970_c0_seq1.path1;transcripts=comp149970_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49958246	49959086	.	+	.	ID=comp149970_c0_seq1.mrna1;geneID=comp149970_c0_seq1.path1;Name=comp149970_c0_seq1;Dir=indeterminatecoverage=97.3;identity=93.9;matches=807;mismatches=30;indels=22;unknowns=0;Target=comp149970_c0_seq1 878 24 .;CDS_Target=comp149970_c0_seq1 598 437 .;locus=RLOC_00007827
Chr1	stalkie_big_nohaplotig	exon	49958246	49959086	93	+	.	Parent=comp149970_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49958659	49958820	.	+	0	Parent=comp149970_c0_seq1.mrna1
Chr1	gffcl	locus	49962926	49981464	.	.	.	ID=RLOC_00007828;geneIDs=FBgn0261360.1.path1,comp135359_c0_seq1.path1;transcripts=FBgn0261360.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49963373	49981464	.	-	.	ID=FBgn0261360.1.mrna1;geneID=FBgn0261360.1.path1;Name=FBgn0261360.1;Dir=sensecoverage=99.9;identity=99.5;matches=4609;mismatches=21;indels=0;unknowns=0;locus=RLOC_00007828
Chr1	stalkie_big_nohaplotig	exon	49963373	49965116	99	-	.	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 2887 4630 +
Chr1	stalkie_big_nohaplotig	exon	49965193	49965357	100	-	.	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 2722 2886 +
Chr1	stalkie_big_nohaplotig	exon	49965425	49965653	100	-	.	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 2493 2721 +
Chr1	stalkie_big_nohaplotig	exon	49966079	49966388	99	-	.	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 2183 2492 +
Chr1	stalkie_big_nohaplotig	exon	49966452	49966617	99	-	.	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 2017 2182 +
Chr1	stalkie_big_nohaplotig	exon	49966677	49967009	99	-	.	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 1684 2016 +
Chr1	stalkie_big_nohaplotig	exon	49967226	49967522	98	-	.	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 1387 1683 +
Chr1	stalkie_big_nohaplotig	exon	49967766	49967926	98	-	.	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 1226 1386 +
Chr1	stalkie_big_nohaplotig	exon	49967999	49968170	100	-	.	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 1054 1225 +
Chr1	stalkie_big_nohaplotig	exon	49972673	49972895	100	-	.	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 831 1053 +
Chr1	stalkie_big_nohaplotig	exon	49973005	49973159	100	-	.	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 676 830 +
Chr1	stalkie_big_nohaplotig	exon	49973236	49973448	99	-	.	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 463 675 +
Chr1	stalkie_big_nohaplotig	exon	49977199	49977264	100	-	.	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 397 462 +
Chr1	stalkie_big_nohaplotig	exon	49980626	49980823	100	-	.	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 199 396 +
Chr1	stalkie_big_nohaplotig	exon	49981267	49981464	100	-	.	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 1 198 +
Chr1	stalkie_big_nohaplotig	CDS	49963374	49965116	.	-	0	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 2887 4629 +
Chr1	stalkie_big_nohaplotig	CDS	49965193	49965357	.	-	0	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 2722 2886 +
Chr1	stalkie_big_nohaplotig	CDS	49965425	49965653	.	-	1	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 2493 2721 +
Chr1	stalkie_big_nohaplotig	CDS	49966079	49966388	.	-	2	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 2183 2492 +
Chr1	stalkie_big_nohaplotig	CDS	49966452	49966617	.	-	0	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 2017 2182 +
Chr1	stalkie_big_nohaplotig	CDS	49966677	49967009	.	-	0	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 1684 2016 +
Chr1	stalkie_big_nohaplotig	CDS	49967226	49967522	.	-	0	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 1387 1683 +
Chr1	stalkie_big_nohaplotig	CDS	49967766	49967926	.	-	2	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 1226 1386 +
Chr1	stalkie_big_nohaplotig	CDS	49967999	49968170	.	-	0	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 1054 1225 +
Chr1	stalkie_big_nohaplotig	CDS	49972673	49972895	.	-	1	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 831 1053 +
Chr1	stalkie_big_nohaplotig	CDS	49973005	49973159	.	-	0	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 676 830 +
Chr1	stalkie_big_nohaplotig	CDS	49973236	49973448	.	-	0	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 463 675 +
Chr1	stalkie_big_nohaplotig	CDS	49977199	49977264	.	-	0	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 397 462 +
Chr1	stalkie_big_nohaplotig	CDS	49980626	49980823	.	-	0	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 199 396 +
Chr1	stalkie_big_nohaplotig	CDS	49981267	49981464	.	-	0	Parent=FBgn0261360.1.mrna1;Target=FBgn0261360.1 1 198 +
Chr1	gffcl	locus	49986013	49986813	.	-	.	ID=RLOC_00007829;geneIDs=FBgn0036905.1.path1;transcripts=FBgn0036905.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	49986013	49986813	.	-	.	ID=FBgn0036905.1.mrna1;geneID=FBgn0036905.1.path1;Name=FBgn0036905.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=800;mismatches=1;indels=0;unknowns=0;Target=FBgn0036905.1 801 1 .;locus=RLOC_00007829
Chr1	stalkie_big_nohaplotig	exon	49986013	49986813	99	-	.	Parent=FBgn0036905.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	49986013	49986813	.	-	0	Parent=FBgn0036905.1.mrna1
Chr1	gffcl	locus	50010016	50010538	.	+	.	ID=RLOC_00007830;geneIDs=comp90965_c0_seq1.path1;transcripts=comp90965_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	50010016	50010538	.	+	.	ID=comp90965_c0_seq1.mrna1;geneID=comp90965_c0_seq1.path1;Name=comp90965_c0_seq1;Dir=indeterminatecoverage=95.8;identity=99.8;matches=523;mismatches=0;indels=1;unknowns=0;Target=comp90965_c0_seq1 524 1 .;CDS_Target=comp90965_c0_seq1 156 1 .;locus=RLOC_00007830
Chr1	stalkie_big_nohaplotig	exon	50010016	50010538	99	+	.	Parent=comp90965_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	50010016	50010171	.	+	0	Parent=comp90965_c0_seq1.mrna1
Chr1	gffcl	locus	50130230	50131234	.	+	.	ID=RLOC_00007831;geneIDs=FBgn0035513.1.path1;transcripts=FBgn0035513.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	50130230	50131234	.	+	.	ID=FBgn0035513.1.mrna1;geneID=FBgn0035513.1.path1;Name=FBgn0035513.1;Dir=sensecoverage=100.0;identity=99.8;matches=814;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007831
Chr1	stalkie_big_nohaplotig	exon	50130230	50130265	100	+	.	Parent=FBgn0035513.1.mrna1;Target=FBgn0035513.1 1 36 +
Chr1	stalkie_big_nohaplotig	exon	50130455	50131234	99	+	.	Parent=FBgn0035513.1.mrna1;Target=FBgn0035513.1 37 816 +
Chr1	stalkie_big_nohaplotig	CDS	50130230	50130265	.	+	0	Parent=FBgn0035513.1.mrna1;Target=FBgn0035513.1 1 36 +
Chr1	stalkie_big_nohaplotig	CDS	50130455	50131234	.	+	0	Parent=FBgn0035513.1.mrna1;Target=FBgn0035513.1 37 816 +
Chr1	gffcl	locus	50150391	50151032	.	+	.	ID=RLOC_00007832;geneIDs=comp155985_c0_seq1.path1;transcripts=comp155985_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	50150391	50151032	.	+	.	ID=comp155985_c0_seq1.mrna1;geneID=comp155985_c0_seq1.path1;Name=comp155985_c0_seq1;Dir=indeterminatecoverage=97.7;identity=98.3;matches=631;mismatches=11;indels=0;unknowns=0;Target=comp155985_c0_seq1 657 16 .;CDS_Target=comp155985_c0_seq1 289 152 .;locus=RLOC_00007832
Chr1	stalkie_big_nohaplotig	exon	50150391	50151032	98	+	.	Parent=comp155985_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	50150527	50150664	.	+	0	Parent=comp155985_c0_seq1.mrna1
Chr1	gffcl	locus	50158513	50159010	.	-	.	ID=RLOC_00007833;geneIDs=comp137048_c0_seq1.path1;transcripts=comp137048_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	50158513	50159010	.	-	.	ID=comp137048_c0_seq1.mrna1;geneID=comp137048_c0_seq1.path1;Name=comp137048_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=489;mismatches=4;indels=5;unknowns=0;Target=comp137048_c0_seq1 493 1 .;CDS_Target=comp137048_c0_seq1 471 409 .;locus=RLOC_00007833
Chr1	stalkie_big_nohaplotig	exon	50158513	50159010	98	-	.	Parent=comp137048_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	50158535	50158597	.	-	0	Parent=comp137048_c0_seq1.mrna1
Chr1	gffcl	locus	50159464	50164288	.	-	.	ID=RLOC_00007834;geneIDs=FBgn0001257.1.path1;transcripts=FBgn0001257.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	50159464	50164288	.	-	.	ID=FBgn0001257.1.mrna1;geneID=FBgn0001257.1.path1;Name=FBgn0001257.1;Dir=sensecoverage=100.0;identity=99.8;matches=928;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007834
Chr1	stalkie_big_nohaplotig	exon	50159464	50159481	100	-	.	Parent=FBgn0001257.1.mrna1;Target=FBgn0001257.1 913 930 +
Chr1	stalkie_big_nohaplotig	exon	50159670	50160164	99	-	.	Parent=FBgn0001257.1.mrna1;Target=FBgn0001257.1 418 912 +
Chr1	stalkie_big_nohaplotig	exon	50160294	50160584	100	-	.	Parent=FBgn0001257.1.mrna1;Target=FBgn0001257.1 127 417 +
Chr1	stalkie_big_nohaplotig	exon	50164163	50164288	100	-	.	Parent=FBgn0001257.1.mrna1;Target=FBgn0001257.1 1 126 +
Chr1	stalkie_big_nohaplotig	CDS	50159464	50159481	.	-	0	Parent=FBgn0001257.1.mrna1;Target=FBgn0001257.1 913 930 +
Chr1	stalkie_big_nohaplotig	CDS	50159670	50160164	.	-	0	Parent=FBgn0001257.1.mrna1;Target=FBgn0001257.1 418 912 +
Chr1	stalkie_big_nohaplotig	CDS	50160294	50160584	.	-	0	Parent=FBgn0001257.1.mrna1;Target=FBgn0001257.1 127 417 +
Chr1	stalkie_big_nohaplotig	CDS	50164163	50164288	.	-	0	Parent=FBgn0001257.1.mrna1;Target=FBgn0001257.1 1 126 +
Chr1	gffcl	locus	50163217	50215111	.	-	.	ID=RLOC_00007835;geneIDs=comp113609_c0_seq1.path1;transcripts=comp113609_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	50163217	50215111	.	-	.	ID=comp113609_c0_seq1.mrna1;geneID=comp113609_c0_seq1.path1;Name=comp113609_c0_seq1;Dir=indeterminatecoverage=92.0;identity=95.4;matches=583;mismatches=15;indels=13;unknowns=41;Target=comp113609_c0_seq1 502 176 .;locus=RLOC_00007835
Chr1	stalkie_big_nohaplotig	exon	50163217	50163224	100	-	.	Parent=comp113609_c0_seq1.mrna1;Target=comp113609_c0_seq1 645 638 .
Chr1	stalkie_big_nohaplotig	exon	50176695	50176701	100	-	.	Parent=comp113609_c0_seq1.mrna1;Target=comp113609_c0_seq1 637 631 .
Chr1	stalkie_big_nohaplotig	exon	50187086	50187092	100	-	.	Parent=comp113609_c0_seq1.mrna1;Target=comp113609_c0_seq1 630 624 .
Chr1	stalkie_big_nohaplotig	exon	50187225	50187232	100	-	.	Parent=comp113609_c0_seq1.mrna1;Target=comp113609_c0_seq1 623 616 .
Chr1	stalkie_big_nohaplotig	exon	50189553	50189600	58	-	.	Parent=comp113609_c0_seq1.mrna1;Target=comp113609_c0_seq1 615 570 .
Chr1	stalkie_big_nohaplotig	exon	50190552	50190558	100	-	.	Parent=comp113609_c0_seq1.mrna1;Target=comp113609_c0_seq1 569 563 .
Chr1	stalkie_big_nohaplotig	exon	50214551	50215111	98	-	.	Parent=comp113609_c0_seq1.mrna1;Target=comp113609_c0_seq1 562 1 .
Chr1	stalkie_big_nohaplotig	CDS	50214611	50214937	.	-	0	Parent=comp113609_c0_seq1.mrna1
Chr1	gffcl	locus	50191040	50191328	.	-	.	ID=RLOC_00007836;geneIDs=comp111185_c0_seq1.path1;transcripts=comp111185_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	50191040	50191328	.	-	.	ID=comp111185_c0_seq1.mrna1;geneID=comp111185_c0_seq1.path1;Name=comp111185_c0_seq1;Dir=indeterminatecoverage=92.0;identity=99.7;matches=288;mismatches=1;indels=0;unknowns=0;Target=comp111185_c0_seq1 290 2 .;CDS_Target=comp111185_c0_seq1 116 3 .;locus=RLOC_00007836
Chr1	stalkie_big_nohaplotig	exon	50191040	50191328	99	-	.	Parent=comp111185_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	50191214	50191327	.	-	0	Parent=comp111185_c0_seq1.mrna1
Chr1	gffcl	locus	50204964	50205004	.	+	.	ID=RLOC_00007837;geneIDs=FBgn0035515.1.path1;transcripts=FBgn0035515.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	50204964	50205004	.	+	.	ID=FBgn0035515.1.mrna1;geneID=FBgn0035515.1.path1;Name=FBgn0035515.1;Dir=indeterminatecoverage=3.1;identity=100.0;matches=41;mismatches=0;indels=0;unknowns=0;Target=FBgn0035515.1 41 1 .;locus=RLOC_00007837
Chr1	stalkie_big_nohaplotig	exon	50204964	50205004	100	+	.	Parent=FBgn0035515.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	50204964	50205004	.	+	0	Parent=FBgn0035515.1.mrna1
Chr1	gffcl	locus	50208602	50209059	.	-	.	ID=RLOC_00007838;geneIDs=comp113995_c0_seq1.path1;transcripts=comp113995_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	50208602	50209059	.	-	.	ID=comp113995_c0_seq1.mrna1;geneID=comp113995_c0_seq1.path1;Name=comp113995_c0_seq1;Dir=indeterminatecoverage=94.6;identity=94.1;matches=431;mismatches=6;indels=21;unknowns=0;Target=comp113995_c0_seq1 461 25 .;CDS_Target=comp113995_c0_seq1 171 25 .;locus=RLOC_00007838
Chr1	stalkie_big_nohaplotig	exon	50208602	50209059	94	-	.	Parent=comp113995_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	50208913	50209059	.	-	0	Parent=comp113995_c0_seq1.mrna1
Chr1	gffcl	locus	50216839	50220245	.	-	.	ID=RLOC_00007839;geneIDs=FBgn0041171.1.path1;transcripts=FBgn0041171.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	50216839	50220245	.	-	.	ID=FBgn0041171.1.mrna1;geneID=FBgn0041171.1.path1;Name=FBgn0041171.1;Dir=sensecoverage=100.0;identity=99.9;matches=3208;mismatches=1;indels=1;unknowns=0;locus=RLOC_00007839
Chr1	stalkie_big_nohaplotig	exon	50216839	50216856	94	-	.	Parent=FBgn0041171.1.mrna1;Target=FBgn0041171.1 3192 3210 +
Chr1	stalkie_big_nohaplotig	exon	50216925	50217106	100	-	.	Parent=FBgn0041171.1.mrna1;Target=FBgn0041171.1 3010 3191 +
Chr1	stalkie_big_nohaplotig	exon	50217169	50219004	100	-	.	Parent=FBgn0041171.1.mrna1;Target=FBgn0041171.1 1174 3009 +
Chr1	stalkie_big_nohaplotig	exon	50219073	50220245	99	-	.	Parent=FBgn0041171.1.mrna1;Target=FBgn0041171.1 1 1173 +
Chr1	stalkie_big_nohaplotig	CDS	50216839	50216856	.	-	1	Parent=FBgn0041171.1.mrna1;Target=FBgn0041171.1 3192 3210 +
Chr1	stalkie_big_nohaplotig	CDS	50216925	50217106	.	-	0	Parent=FBgn0041171.1.mrna1;Target=FBgn0041171.1 3010 3191 +
Chr1	stalkie_big_nohaplotig	CDS	50217169	50219004	.	-	0	Parent=FBgn0041171.1.mrna1;Target=FBgn0041171.1 1174 3009 +
Chr1	stalkie_big_nohaplotig	CDS	50219073	50220245	.	-	0	Parent=FBgn0041171.1.mrna1;Target=FBgn0041171.1 1 1173 +
Chr1	gffcl	locus	50319216	50319480	.	+	.	ID=RLOC_00007842;geneIDs=comp158982_c0_seq1.path2;transcripts=comp158982_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	50319216	50319480	.	+	.	ID=comp158982_c0_seq1.mrna2;geneID=comp158982_c0_seq1.path2;Name=comp158982_c0_seq1;Dir=indeterminatecoverage=23.5;identity=100.0;matches=265;mismatches=0;indels=0;unknowns=0;Target=comp158982_c0_seq1 1126 862 .;locus=RLOC_00007842
Chr1	stalkie_big_nohaplotig	exon	50319216	50319480	100	+	.	Parent=comp158982_c0_seq1.mrna2
Chr1	gffcl	locus	50427210	50428054	.	+	.	ID=RLOC_00007844;geneIDs=Dp_FBgn0243606.path2,comp163367_c4_seq1.path2;transcripts=comp163367_c4_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	50427210	50428054	.	+	.	ID=comp163367_c4_seq1.mrna2;geneID=comp163367_c4_seq1.path2;Name=comp163367_c4_seq1;Dir=indeterminatecoverage=99.6;identity=98.1;matches=829;mismatches=16;indels=0;unknowns=0;Target=comp163367_c4_seq1 845 1 .;CDS_Target=comp163367_c4_seq1 844 2 .;locus=RLOC_00007844
Chr1	stalkie_big_nohaplotig	exon	50427210	50428054	98	+	.	Parent=comp163367_c4_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	50427211	50428053	.	+	0	Parent=comp163367_c4_seq1.mrna2
Chr1	gffcl	locus	50457896	50458250	.	-	.	ID=RLOC_00007846;geneIDs=comp162590_c2_seq1.path1;transcripts=comp162590_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	50457896	50458250	.	-	.	ID=comp162590_c2_seq1.mrna1;geneID=comp162590_c2_seq1.path1;Name=comp162590_c2_seq1;Dir=indeterminatecoverage=51.1;identity=98.9;matches=354;mismatches=1;indels=3;unknowns=0;Target=comp162590_c2_seq1 382 25 .;CDS_Target=comp162590_c2_seq1 66 25 .;locus=RLOC_00007846
Chr1	stalkie_big_nohaplotig	exon	50457896	50458250	98	-	.	Parent=comp162590_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	50458209	50458250	.	-	0	Parent=comp162590_c2_seq1.mrna1
Chr1	gffcl	locus	50481218	50481457	.	-	.	ID=RLOC_00007847;geneIDs=comp135118_c1_seq1.path1;transcripts=comp135118_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	50481218	50481457	.	-	.	ID=comp135118_c1_seq1.mrna1;geneID=comp135118_c1_seq1.path1;Name=comp135118_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=240;mismatches=0;indels=0;unknowns=0;Target=comp135118_c1_seq1 240 1 .;CDS_Target=comp135118_c1_seq1 218 90 .;locus=RLOC_00007847
Chr1	stalkie_big_nohaplotig	exon	50481218	50481457	100	-	.	Parent=comp135118_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	50481240	50481368	.	-	0	Parent=comp135118_c1_seq1.mrna1
Chr1	gffcl	locus	50481812	50482192	.	+	.	ID=RLOC_00007848;geneIDs=comp703570_c0_seq1.path1;transcripts=comp703570_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	50481812	50482192	.	+	.	ID=comp703570_c0_seq1.mrna1;geneID=comp703570_c0_seq1.path1;Name=comp703570_c0_seq1;Dir=indeterminatecoverage=94.8;identity=99.5;matches=379;mismatches=2;indels=0;unknowns=0;Target=comp703570_c0_seq1 402 22 .;CDS_Target=comp703570_c0_seq1 52 29 .;locus=RLOC_00007848
Chr1	stalkie_big_nohaplotig	exon	50481812	50482192	99	+	.	Parent=comp703570_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	50481819	50481842	.	+	0	Parent=comp703570_c0_seq1.mrna1
Chr1	gffcl	locus	50483562	50483942	.	-	.	ID=RLOC_00007849;geneIDs=comp703570_c0_seq1.path2;transcripts=comp703570_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	50483562	50483942	.	-	.	ID=comp703570_c0_seq1.mrna2;geneID=comp703570_c0_seq1.path2;Name=comp703570_c0_seq1;Dir=indeterminatecoverage=94.8;identity=99.5;matches=379;mismatches=2;indels=0;unknowns=0;Target=comp703570_c0_seq1 402 22 .;CDS_Target=comp703570_c0_seq1 52 29 .;locus=RLOC_00007849
Chr1	stalkie_big_nohaplotig	exon	50483562	50483942	99	-	.	Parent=comp703570_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	50483912	50483935	.	-	0	Parent=comp703570_c0_seq1.mrna2
Chr1	gffcl	locus	50484297	50484536	.	+	.	ID=RLOC_00007850;geneIDs=comp135118_c1_seq1.path2;transcripts=comp135118_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	50484297	50484536	.	+	.	ID=comp135118_c1_seq1.mrna2;geneID=comp135118_c1_seq1.path2;Name=comp135118_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=240;mismatches=0;indels=0;unknowns=0;Target=comp135118_c1_seq1 240 1 .;CDS_Target=comp135118_c1_seq1 218 90 .;locus=RLOC_00007850
Chr1	stalkie_big_nohaplotig	exon	50484297	50484536	100	+	.	Parent=comp135118_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	50484386	50484514	.	+	0	Parent=comp135118_c1_seq1.mrna2
Chr1	gffcl	locus	50564837	50565239	.	+	.	ID=RLOC_00007855;geneIDs=comp153615_c1_seq1.path5;transcripts=comp153615_c1_seq1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	50564837	50565239	.	+	.	ID=comp153615_c1_seq1.mrna5;geneID=comp153615_c1_seq1.path5;Name=comp153615_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=402;mismatches=1;indels=0;unknowns=0;Target=comp153615_c1_seq1 403 1 .;CDS_Target=comp153615_c1_seq1 96 1 .;locus=RLOC_00007855
Chr1	stalkie_big_nohaplotig	exon	50564837	50565239	99	+	.	Parent=comp153615_c1_seq1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	50564837	50564932	.	+	0	Parent=comp153615_c1_seq1.mrna5
Chr1	gffcl	locus	50572248	50572650	.	-	.	ID=RLOC_00007856;geneIDs=comp153615_c1_seq1.path6;transcripts=comp153615_c1_seq1.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	50572248	50572650	.	-	.	ID=comp153615_c1_seq1.mrna6;geneID=comp153615_c1_seq1.path6;Name=comp153615_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=402;mismatches=1;indels=0;unknowns=0;Target=comp153615_c1_seq1 403 1 .;CDS_Target=comp153615_c1_seq1 96 1 .;locus=RLOC_00007856
Chr1	stalkie_big_nohaplotig	exon	50572248	50572650	99	-	.	Parent=comp153615_c1_seq1.mrna6
Chr1	stalkie_big_nohaplotig	CDS	50572555	50572650	.	-	0	Parent=comp153615_c1_seq1.mrna6
Chr1	gffcl	locus	50608555	50609433	.	+	.	ID=RLOC_00007857;geneIDs=comp159088_c0_seq1.path1;transcripts=comp159088_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	50608555	50609433	.	+	.	ID=comp159088_c0_seq1.mrna1;geneID=comp159088_c0_seq1.path1;Name=comp159088_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=621;mismatches=11;indels=0;unknowns=0;locus=RLOC_00007857
Chr1	stalkie_big_nohaplotig	exon	50608555	50609068	98	+	.	Parent=comp159088_c0_seq1.mrna1;Target=comp159088_c0_seq1 514 1 .
Chr1	stalkie_big_nohaplotig	exon	50609316	50609433	97	+	.	Parent=comp159088_c0_seq1.mrna1;Target=comp159088_c0_seq1 662 545 .
Chr1	stalkie_big_nohaplotig	CDS	50608682	50609068	.	+	0	Parent=comp159088_c0_seq1.mrna1;Target=comp159088_c0_seq1 514 128 .
Chr1	stalkie_big_nohaplotig	CDS	50609316	50609330	.	+	0	Parent=comp159088_c0_seq1.mrna1;Target=comp159088_c0_seq1 559 545 .
Chr1	gffcl	locus	50768427	50769314	.	+	.	ID=RLOC_00007858;geneIDs=FBgn0023519.1.path1;transcripts=FBgn0023519.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	50768427	50769314	.	+	.	ID=FBgn0023519.1.mrna1;geneID=FBgn0023519.1.path1;Name=FBgn0023519.1;Dir=sensecoverage=100.0;identity=100.0;matches=780;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007858
Chr1	stalkie_big_nohaplotig	exon	50768427	50768523	100	+	.	Parent=FBgn0023519.1.mrna1;Target=FBgn0023519.1 1 97 +
Chr1	stalkie_big_nohaplotig	exon	50768577	50768645	100	+	.	Parent=FBgn0023519.1.mrna1;Target=FBgn0023519.1 98 166 +
Chr1	stalkie_big_nohaplotig	exon	50768701	50769314	100	+	.	Parent=FBgn0023519.1.mrna1;Target=FBgn0023519.1 167 780 +
Chr1	stalkie_big_nohaplotig	CDS	50768427	50768523	.	+	0	Parent=FBgn0023519.1.mrna1;Target=FBgn0023519.1 1 97 +
Chr1	stalkie_big_nohaplotig	CDS	50768577	50768645	.	+	2	Parent=FBgn0023519.1.mrna1;Target=FBgn0023519.1 98 166 +
Chr1	stalkie_big_nohaplotig	CDS	50768701	50769314	.	+	2	Parent=FBgn0023519.1.mrna1;Target=FBgn0023519.1 167 780 +
Chr1	gffcl	locus	50769732	50857585	.	-	.	ID=RLOC_00007859;geneIDs=comp145703_c0_seq1.path1;transcripts=comp145703_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	50769732	50857585	.	-	.	ID=comp145703_c0_seq1.mrna1;geneID=comp145703_c0_seq1.path1;Name=comp145703_c0_seq1;Dir=indeterminatecoverage=89.9;identity=96.7;matches=437;mismatches=9;indels=6;unknowns=0;Target=comp145703_c0_seq1 167 147 .;locus=RLOC_00007859
Chr1	stalkie_big_nohaplotig	exon	50769732	50770095	98	-	.	Parent=comp145703_c0_seq1.mrna1;Target=comp145703_c0_seq1 503 139 .
Chr1	stalkie_big_nohaplotig	exon	50782478	50782482	80	-	.	Parent=comp145703_c0_seq1.mrna1;Target=comp145703_c0_seq1 138 134 .
Chr1	stalkie_big_nohaplotig	exon	50789208	50789213	100	-	.	Parent=comp145703_c0_seq1.mrna1;Target=comp145703_c0_seq1 133 128 .
Chr1	stalkie_big_nohaplotig	exon	50793144	50793158	73	-	.	Parent=comp145703_c0_seq1.mrna1;Target=comp145703_c0_seq1 127 113 .
Chr1	stalkie_big_nohaplotig	exon	50795642	50795644	100	-	.	Parent=comp145703_c0_seq1.mrna1;Target=comp145703_c0_seq1 112 110 .
Chr1	stalkie_big_nohaplotig	exon	50803031	50803039	100	-	.	Parent=comp145703_c0_seq1.mrna1;Target=comp145703_c0_seq1 109 101 .
Chr1	stalkie_big_nohaplotig	exon	50806255	50806263	64	-	.	Parent=comp145703_c0_seq1.mrna1;Target=comp145703_c0_seq1 100 87 .
Chr1	stalkie_big_nohaplotig	exon	50830696	50830706	90	-	.	Parent=comp145703_c0_seq1.mrna1;Target=comp145703_c0_seq1 86 76 .
Chr1	stalkie_big_nohaplotig	exon	50838708	50838712	100	-	.	Parent=comp145703_c0_seq1.mrna1;Target=comp145703_c0_seq1 75 71 .
Chr1	stalkie_big_nohaplotig	exon	50845742	50845745	100	-	.	Parent=comp145703_c0_seq1.mrna1;Target=comp145703_c0_seq1 70 67 .
Chr1	stalkie_big_nohaplotig	exon	50849901	50849903	100	-	.	Parent=comp145703_c0_seq1.mrna1;Target=comp145703_c0_seq1 66 64 .
Chr1	stalkie_big_nohaplotig	exon	50851301	50851306	100	-	.	Parent=comp145703_c0_seq1.mrna1;Target=comp145703_c0_seq1 63 58 .
Chr1	stalkie_big_nohaplotig	exon	50857580	50857585	100	-	.	Parent=comp145703_c0_seq1.mrna1;Target=comp145703_c0_seq1 57 52 .
Chr1	stalkie_big_nohaplotig	CDS	50770068	50770087	.	-	0	Parent=comp145703_c0_seq1.mrna1
Chr1	gffcl	locus	50813316	50813837	.	-	.	ID=RLOC_00007860;geneIDs=comp153446_c1_seq1.path1;transcripts=comp153446_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	50813316	50813837	.	-	.	ID=comp153446_c1_seq1.mrna1;geneID=comp153446_c1_seq1.path1;Name=comp153446_c1_seq1;Dir=indeterminatecoverage=62.6;identity=96.4;matches=503;mismatches=19;indels=0;unknowns=0;Target=comp153446_c1_seq1 522 1 .;CDS_Target=comp153446_c1_seq1 411 331 .;locus=RLOC_00007860
Chr1	stalkie_big_nohaplotig	exon	50813316	50813837	96	-	.	Parent=comp153446_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	50813427	50813507	.	-	0	Parent=comp153446_c1_seq1.mrna1
Chr1	gffcl	locus	50814574	50815306	.	-	.	ID=RLOC_00007861;geneIDs=comp154824_c1_seq1.path1;transcripts=comp154824_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	50814574	50815306	.	-	.	ID=comp154824_c1_seq1.mrna1;geneID=comp154824_c1_seq1.path1;Name=comp154824_c1_seq1;Dir=indeterminatecoverage=100.0;identity=92.0;matches=676;mismatches=10;indels=49;unknowns=0;Target=comp154824_c1_seq1 688 1 .;CDS_Target=comp154824_c1_seq1 311 240 .;locus=RLOC_00007861
Chr1	stalkie_big_nohaplotig	exon	50814574	50815306	91	-	.	Parent=comp154824_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	50814998	50815069	.	-	0	Parent=comp154824_c1_seq1.mrna1
Chr1	gffcl	locus	50816932	50817003	.	-	.	ID=RLOC_00007862;geneIDs=FBgn0000261.1.path1;transcripts=FBgn0000261.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	50816932	50817003	.	-	.	ID=FBgn0000261.1.mrna1;geneID=FBgn0000261.1.path1;Name=FBgn0000261.1;Dir=indeterminatecoverage=4.7;identity=100.0;matches=72;mismatches=0;indels=0;unknowns=0;Target=FBgn0000261.1 72 1 .;locus=RLOC_00007862
Chr1	stalkie_big_nohaplotig	exon	50816932	50817003	100	-	.	Parent=FBgn0000261.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	50816932	50817003	.	-	0	Parent=FBgn0000261.1.mrna1
Chr1	gffcl	locus	50867578	50868176	.	-	.	ID=RLOC_00007863;geneIDs=comp160431_c0_seq1.path3;transcripts=comp160431_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	50867578	50868176	.	-	.	ID=comp160431_c0_seq1.mrna3;geneID=comp160431_c0_seq1.path3;Name=comp160431_c0_seq1;Dir=indeterminatecoverage=98.5;identity=98.5;matches=590;mismatches=9;indels=0;unknowns=0;Target=comp160431_c0_seq1 599 1 .;CDS_Target=comp160431_c0_seq1 528 1 .;locus=RLOC_00007863
Chr1	stalkie_big_nohaplotig	exon	50867578	50868176	98	-	.	Parent=comp160431_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	50867649	50868176	.	-	0	Parent=comp160431_c0_seq1.mrna3
Chr1	gffcl	locus	51192388	51193380	.	+	.	ID=RLOC_00007866;geneIDs=comp156361_c0_seq1.path1;transcripts=comp156361_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51192388	51193380	.	+	.	ID=comp156361_c0_seq1.mrna1;geneID=comp156361_c0_seq1.path1;Name=comp156361_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=988;mismatches=5;indels=1;unknowns=0;Target=comp156361_c0_seq1 994 1 .;CDS_Target=comp156361_c0_seq1 351 154 .;locus=RLOC_00007866
Chr1	stalkie_big_nohaplotig	exon	51192388	51193380	99	+	.	Parent=comp156361_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	51192541	51192738	.	+	0	Parent=comp156361_c0_seq1.mrna1
Chr1	gffcl	locus	51196250	51197831	.	-	.	ID=RLOC_00007867;geneIDs=FBgn0003401.1.path2;transcripts=FBgn0003401.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	51196250	51197831	.	-	.	ID=FBgn0003401.1.mrna2;geneID=FBgn0003401.1.path2;Name=FBgn0003401.1;Dir=sensecoverage=100.0;identity=99.8;matches=1359;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007867
Chr1	stalkie_big_nohaplotig	exon	51196250	51196620	100	-	.	Parent=FBgn0003401.1.mrna2;Target=FBgn0003401.1 992 1362 +
Chr1	stalkie_big_nohaplotig	exon	51196679	51197571	99	-	.	Parent=FBgn0003401.1.mrna2;Target=FBgn0003401.1 99 991 +
Chr1	stalkie_big_nohaplotig	exon	51197734	51197831	100	-	.	Parent=FBgn0003401.1.mrna2;Target=FBgn0003401.1 1 98 +
Chr1	stalkie_big_nohaplotig	CDS	51196250	51196620	.	-	2	Parent=FBgn0003401.1.mrna2;Target=FBgn0003401.1 992 1362 +
Chr1	stalkie_big_nohaplotig	CDS	51196679	51197571	.	-	1	Parent=FBgn0003401.1.mrna2;Target=FBgn0003401.1 99 991 +
Chr1	stalkie_big_nohaplotig	CDS	51197734	51197831	.	-	0	Parent=FBgn0003401.1.mrna2;Target=FBgn0003401.1 1 98 +
Chr1	gffcl	locus	51200001	51201296	.	+	.	ID=RLOC_00007868;geneIDs=FBgn0039537.1.path1;transcripts=FBgn0039537.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51200001	51201296	.	+	.	ID=FBgn0039537.1.mrna1;geneID=FBgn0039537.1.path1;Name=FBgn0039537.1;Dir=sensecoverage=100.0;identity=99.6;matches=1234;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007868
Chr1	stalkie_big_nohaplotig	exon	51200001	51200193	100	+	.	Parent=FBgn0039537.1.mrna1;Target=FBgn0039537.1 1 193 +
Chr1	stalkie_big_nohaplotig	exon	51200251	51201296	99	+	.	Parent=FBgn0039537.1.mrna1;Target=FBgn0039537.1 194 1239 +
Chr1	stalkie_big_nohaplotig	CDS	51200001	51200193	.	+	0	Parent=FBgn0039537.1.mrna1;Target=FBgn0039537.1 1 193 +
Chr1	stalkie_big_nohaplotig	CDS	51200251	51201296	.	+	2	Parent=FBgn0039537.1.mrna1;Target=FBgn0039537.1 194 1239 +
Chr1	gffcl	locus	51202559	51203467	.	-	.	ID=RLOC_00007869;geneIDs=FBgn0034913.1.path1;transcripts=FBgn0034913.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51202559	51203467	.	-	.	ID=FBgn0034913.1.mrna1;geneID=FBgn0034913.1.path1;Name=FBgn0034913.1;Dir=sensecoverage=100.0;identity=100.0;matches=840;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007869
Chr1	stalkie_big_nohaplotig	exon	51202559	51203151	100	-	.	Parent=FBgn0034913.1.mrna1;Target=FBgn0034913.1 248 840 +
Chr1	stalkie_big_nohaplotig	exon	51203221	51203467	100	-	.	Parent=FBgn0034913.1.mrna1;Target=FBgn0034913.1 1 247 +
Chr1	stalkie_big_nohaplotig	CDS	51202559	51203151	.	-	2	Parent=FBgn0034913.1.mrna1;Target=FBgn0034913.1 248 840 +
Chr1	stalkie_big_nohaplotig	CDS	51203221	51203467	.	-	0	Parent=FBgn0034913.1.mrna1;Target=FBgn0034913.1 1 247 +
Chr1	gffcl	locus	51239607	51239852	.	-	.	ID=RLOC_00007871;geneIDs=comp154574_c0_seq1.path2;transcripts=comp154574_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	51239607	51239852	.	-	.	ID=comp154574_c0_seq1.mrna2;geneID=comp154574_c0_seq1.path2;Name=comp154574_c0_seq1;Dir=indeterminatecoverage=84.2;identity=95.5;matches=235;mismatches=11;indels=0;unknowns=0;Target=comp154574_c0_seq1 246 1 .;CDS_Target=comp154574_c0_seq1 149 96 .;locus=RLOC_00007871
Chr1	stalkie_big_nohaplotig	exon	51239607	51239852	95	-	.	Parent=comp154574_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	51239704	51239757	.	-	0	Parent=comp154574_c0_seq1.mrna2
Chr1	gffcl	locus	51317944	51319884	.	+	.	ID=RLOC_00007872;geneIDs=comp163611_c0_seq1.path3;transcripts=comp163611_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	51317944	51319884	.	+	.	ID=comp163611_c0_seq1.mrna3;geneID=comp163611_c0_seq1.path3;Name=comp163611_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1933;mismatches=8;indels=0;unknowns=0;Target=comp163611_c0_seq1 1941 1 .;locus=RLOC_00007872
Chr1	stalkie_big_nohaplotig	exon	51317944	51319884	99	+	.	Parent=comp163611_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	51317944	51319884	.	+	0	Parent=comp163611_c0_seq1.mrna3
Chr1	gffcl	locus	51334888	51356680	.	+	.	ID=RLOC_00007873;geneIDs=comp147589_c0_seq1.path10;transcripts=comp147589_c0_seq1.mrna10
Chr1	stalkie_big_nohaplotig	mRNA	51334888	51356680	.	+	.	ID=comp147589_c0_seq1.mrna10;geneID=comp147589_c0_seq1.path10;Name=comp147589_c0_seq1;Dir=sensecoverage=90.9;identity=99.1;matches=1013;mismatches=8;indels=1;unknowns=0;Target=comp147589_c0_seq1 2 874 +;locus=RLOC_00007873
Chr1	stalkie_big_nohaplotig	exon	51334888	51335883	99	+	.	Parent=comp147589_c0_seq1.mrna10;Target=comp147589_c0_seq1 1 997 +
Chr1	stalkie_big_nohaplotig	exon	51343475	51343476	100	+	.	Parent=comp147589_c0_seq1.mrna10;Target=comp147589_c0_seq1 998 999 +
Chr1	stalkie_big_nohaplotig	exon	51343891	51343898	100	+	.	Parent=comp147589_c0_seq1.mrna10;Target=comp147589_c0_seq1 1000 1007 +
Chr1	stalkie_big_nohaplotig	exon	51349125	51349129	100	+	.	Parent=comp147589_c0_seq1.mrna10;Target=comp147589_c0_seq1 1015 1019 +
Chr1	stalkie_big_nohaplotig	exon	51356671	51356680	100	+	.	Parent=comp147589_c0_seq1.mrna10;Target=comp147589_c0_seq1 1020 1029 +
Chr1	stalkie_big_nohaplotig	CDS	51334889	51335761	.	+	0	Parent=comp147589_c0_seq1.mrna10
Chr1	gffcl	locus	51390976	51391959	.	-	.	ID=RLOC_00007875;geneIDs=FBgn0262534.1.path2;transcripts=FBgn0262534.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	51390976	51391959	.	-	.	ID=FBgn0262534.1.mrna2;geneID=FBgn0262534.1.path2;Name=FBgn0262534.1;Dir=sensecoverage=98.8;identity=99.0;matches=792;mismatches=7;indels=1;unknowns=0;locus=RLOC_00007875
Chr1	stalkie_big_nohaplotig	exon	51390976	51391105	99	-	.	Parent=FBgn0262534.1.mrna2;Target=FBgn0262534.1 670 800 +
Chr1	stalkie_big_nohaplotig	exon	51391181	51391224	100	-	.	Parent=FBgn0262534.1.mrna2;Target=FBgn0262534.1 626 669 +
Chr1	stalkie_big_nohaplotig	exon	51391278	51391493	100	-	.	Parent=FBgn0262534.1.mrna2;Target=FBgn0262534.1 410 625 +
Chr1	stalkie_big_nohaplotig	exon	51391551	51391959	98	-	.	Parent=FBgn0262534.1.mrna2;Target=FBgn0262534.1 1 409 +
Chr1	stalkie_big_nohaplotig	CDS	51390978	51391105	.	-	0	Parent=FBgn0262534.1.mrna2;Target=FBgn0262534.1 670 798 +
Chr1	stalkie_big_nohaplotig	CDS	51391181	51391224	.	-	2	Parent=FBgn0262534.1.mrna2;Target=FBgn0262534.1 626 669 +
Chr1	stalkie_big_nohaplotig	CDS	51391278	51391493	.	-	2	Parent=FBgn0262534.1.mrna2;Target=FBgn0262534.1 410 625 +
Chr1	stalkie_big_nohaplotig	CDS	51391551	51391959	.	-	0	Parent=FBgn0262534.1.mrna2;Target=FBgn0262534.1 1 409 +
Chr1	gffcl	locus	51394842	52307166	.	+	.	ID=RLOC_00007876;geneIDs=FBgn0040805.1.path1,comp155739_c1_seq1.path1;transcripts=comp155739_c1_seq1.mrna1,FBgn0040805.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51394842	52307166	.	+	.	ID=comp155739_c1_seq1.mrna1;geneID=comp155739_c1_seq1.path1;Name=comp155739_c1_seq1;Dir=indeterminatecoverage=75.8;identity=94.8;matches=1019;mismatches=29;indels=27;unknowns=0;locus=RLOC_00007876
Chr1	stalkie_big_nohaplotig	exon	51394842	51395306	99	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 465 1 .
Chr1	stalkie_big_nohaplotig	exon	51406858	51406970	100	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 578 466 .
Chr1	stalkie_big_nohaplotig	exon	51407026	51407277	100	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 830 579 .
Chr1	stalkie_big_nohaplotig	exon	52231271	52231274	100	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 834 831 .
Chr1	stalkie_big_nohaplotig	exon	52236306	52236315	100	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 844 835 .
Chr1	stalkie_big_nohaplotig	exon	52240785	52240789	100	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 849 845 .
Chr1	stalkie_big_nohaplotig	exon	52243467	52243476	80	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 859 850 .
Chr1	stalkie_big_nohaplotig	exon	52244223	52244230	100	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 867 860 .
Chr1	stalkie_big_nohaplotig	exon	52244396	52244409	100	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 881 868 .
Chr1	stalkie_big_nohaplotig	exon	52248787	52248788	100	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 904 903 .
Chr1	stalkie_big_nohaplotig	exon	52255593	52255597	100	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 909 905 .
Chr1	stalkie_big_nohaplotig	exon	52258238	52258239	100	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 911 910 .
Chr1	stalkie_big_nohaplotig	exon	52258739	52258745	100	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 918 912 .
Chr1	stalkie_big_nohaplotig	exon	52258986	52258990	100	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 923 919 .
Chr1	stalkie_big_nohaplotig	exon	52259013	52259014	100	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 972 971 .
Chr1	stalkie_big_nohaplotig	exon	52269634	52269685	75	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 1019 973 .
Chr1	stalkie_big_nohaplotig	exon	52276949	52276952	100	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 1033 1030 .
Chr1	stalkie_big_nohaplotig	exon	52279198	52279207	100	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 1043 1034 .
Chr1	stalkie_big_nohaplotig	exon	52279592	52279618	29	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 1111 1065 .
Chr1	stalkie_big_nohaplotig	exon	52279840	52279841	100	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 1113 1112 .
Chr1	stalkie_big_nohaplotig	exon	52283485	52283489	100	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 1118 1114 .
Chr1	stalkie_big_nohaplotig	exon	52291162	52291164	100	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 1121 1119 .
Chr1	stalkie_big_nohaplotig	exon	52296090	52296095	100	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 1127 1122 .
Chr1	stalkie_big_nohaplotig	exon	52302214	52302220	100	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 1134 1128 .
Chr1	stalkie_big_nohaplotig	exon	52306003	52306026	75	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 1156 1135 .
Chr1	stalkie_big_nohaplotig	exon	52307158	52307166	100	+	.	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 1165 1157 .
Chr1	stalkie_big_nohaplotig	CDS	51395269	51395306	.	+	0	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 465 428 .
Chr1	stalkie_big_nohaplotig	CDS	51406858	51406970	.	+	1	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 578 466 .
Chr1	stalkie_big_nohaplotig	CDS	51407026	51407231	.	+	2	Parent=comp155739_c1_seq1.mrna1;Target=comp155739_c1_seq1 784 579 .
Chr1	stalkie_big_nohaplotig	mRNA	51394970	51407228	.	+	.	ID=FBgn0040805.1.mrna1;geneID=FBgn0040805.1.path1;Name=FBgn0040805.1;Dir=sensecoverage=100.0;identity=100.0;matches=552;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007876
Chr1	stalkie_big_nohaplotig	exon	51394970	51395110	100	+	.	Parent=FBgn0040805.1.mrna1;Target=FBgn0040805.1 1 141 +
Chr1	stalkie_big_nohaplotig	exon	51395212	51395306	100	+	.	Parent=FBgn0040805.1.mrna1;Target=FBgn0040805.1 142 236 +
Chr1	stalkie_big_nohaplotig	exon	51406858	51406970	100	+	.	Parent=FBgn0040805.1.mrna1;Target=FBgn0040805.1 237 349 +
Chr1	stalkie_big_nohaplotig	exon	51407026	51407228	100	+	.	Parent=FBgn0040805.1.mrna1;Target=FBgn0040805.1 350 552 +
Chr1	stalkie_big_nohaplotig	CDS	51394970	51395110	.	+	0	Parent=FBgn0040805.1.mrna1;Target=FBgn0040805.1 1 141 +
Chr1	stalkie_big_nohaplotig	CDS	51395212	51395306	.	+	0	Parent=FBgn0040805.1.mrna1;Target=FBgn0040805.1 142 236 +
Chr1	stalkie_big_nohaplotig	CDS	51406858	51406970	.	+	1	Parent=FBgn0040805.1.mrna1;Target=FBgn0040805.1 237 349 +
Chr1	stalkie_big_nohaplotig	CDS	51407026	51407228	.	+	2	Parent=FBgn0040805.1.mrna1;Target=FBgn0040805.1 350 552 +
Chr1	gffcl	locus	51447461	51447696	.	+	.	ID=RLOC_00007877;geneIDs=comp125798_c0_seq1.path2;transcripts=comp125798_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	51447461	51447696	.	+	.	ID=comp125798_c0_seq1.mrna2;geneID=comp125798_c0_seq1.path2;Name=comp125798_c0_seq1;Dir=indeterminatecoverage=98.8;identity=98.3;matches=233;mismatches=3;indels=1;unknowns=0;Target=comp125798_c0_seq1 238 2 .;CDS_Target=comp125798_c0_seq1 35 3 .;locus=RLOC_00007877
Chr1	stalkie_big_nohaplotig	exon	51447461	51447696	98	+	.	Parent=comp125798_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	51447462	51447493	.	+	0	Parent=comp125798_c0_seq1.mrna2
Chr1	gffcl	locus	51581504	51582724	.	+	.	ID=RLOC_00007878;geneIDs=comp163015_c1_seq1.path1;transcripts=comp163015_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51581504	51582724	.	+	.	ID=comp163015_c1_seq1.mrna1;geneID=comp163015_c1_seq1.path1;Name=comp163015_c1_seq1;Dir=indeterminatecoverage=85.4;identity=93.8;matches=1152;mismatches=62;indels=14;unknowns=0;Target=comp163015_c1_seq1 1223 3 .;CDS_Target=comp163015_c1_seq1 1123 746 .;locus=RLOC_00007878
Chr1	stalkie_big_nohaplotig	exon	51581504	51582724	93	+	.	Parent=comp163015_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	51582240	51582624	.	+	0	Parent=comp163015_c1_seq1.mrna1
Chr1	gffcl	locus	51613155	51613667	.	+	.	ID=RLOC_00007879;geneIDs=FBgn0015320.1.path2;transcripts=FBgn0015320.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	51613155	51613667	.	+	.	ID=FBgn0015320.1.mrna2;geneID=FBgn0015320.1.path2;Name=FBgn0015320.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=511;mismatches=2;indels=0;unknowns=0;Target=FBgn0015320.1 513 1 .;CDS_Target=FBgn0015320.1 513 49 .;locus=RLOC_00007879
Chr1	stalkie_big_nohaplotig	exon	51613155	51613667	99	+	.	Parent=FBgn0015320.1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	51613203	51613667	.	+	0	Parent=FBgn0015320.1.mrna2
Chr1	gffcl	locus	51661649	51755521	.	+	.	ID=RLOC_00007880;geneIDs=comp425461_c0_seq1.path1;transcripts=comp425461_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51661649	51755521	.	+	.	ID=comp425461_c0_seq1.mrna1;geneID=comp425461_c0_seq1.path1;Name=comp425461_c0_seq1;Dir=indeterminatecoverage=88.9;identity=98.8;matches=334;mismatches=4;indels=0;unknowns=0;Target=comp425461_c0_seq1 320 222 .;locus=RLOC_00007880
Chr1	stalkie_big_nohaplotig	exon	51661649	51661651	100	+	.	Parent=comp425461_c0_seq1.mrna1;Target=comp425461_c0_seq1 45 43 .
Chr1	stalkie_big_nohaplotig	exon	51678786	51678792	100	+	.	Parent=comp425461_c0_seq1.mrna1;Target=comp425461_c0_seq1 52 46 .
Chr1	stalkie_big_nohaplotig	exon	51687583	51687585	100	+	.	Parent=comp425461_c0_seq1.mrna1;Target=comp425461_c0_seq1 55 53 .
Chr1	stalkie_big_nohaplotig	exon	51689522	51689532	100	+	.	Parent=comp425461_c0_seq1.mrna1;Target=comp425461_c0_seq1 66 56 .
Chr1	stalkie_big_nohaplotig	exon	51693669	51693675	57	+	.	Parent=comp425461_c0_seq1.mrna1;Target=comp425461_c0_seq1 73 67 .
Chr1	stalkie_big_nohaplotig	exon	51696130	51696135	100	+	.	Parent=comp425461_c0_seq1.mrna1;Target=comp425461_c0_seq1 79 74 .
Chr1	stalkie_big_nohaplotig	exon	51703805	51703809	100	+	.	Parent=comp425461_c0_seq1.mrna1;Target=comp425461_c0_seq1 84 80 .
Chr1	stalkie_big_nohaplotig	exon	51710896	51710898	100	+	.	Parent=comp425461_c0_seq1.mrna1;Target=comp425461_c0_seq1 87 85 .
Chr1	stalkie_big_nohaplotig	exon	51725309	51725316	100	+	.	Parent=comp425461_c0_seq1.mrna1;Target=comp425461_c0_seq1 95 88 .
Chr1	stalkie_big_nohaplotig	exon	51732280	51732281	100	+	.	Parent=comp425461_c0_seq1.mrna1;Target=comp425461_c0_seq1 97 96 .
Chr1	stalkie_big_nohaplotig	exon	51740956	51740960	100	+	.	Parent=comp425461_c0_seq1.mrna1;Target=comp425461_c0_seq1 102 98 .
Chr1	stalkie_big_nohaplotig	exon	51747483	51747488	100	+	.	Parent=comp425461_c0_seq1.mrna1;Target=comp425461_c0_seq1 108 103 .
Chr1	stalkie_big_nohaplotig	exon	51755250	51755521	99	+	.	Parent=comp425461_c0_seq1.mrna1;Target=comp425461_c0_seq1 380 109 .
Chr1	stalkie_big_nohaplotig	CDS	51755363	51755461	.	+	0	Parent=comp425461_c0_seq1.mrna1
Chr1	gffcl	locus	51693930	51694165	.	+	.	ID=RLOC_00007881;geneIDs=comp147172_c0_seq1.path1;transcripts=comp147172_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51693930	51694165	.	+	.	ID=comp147172_c0_seq1.mrna1;geneID=comp147172_c0_seq1.path1;Name=comp147172_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.7;matches=233;mismatches=3;indels=0;unknowns=0;Target=comp147172_c0_seq1 236 1 .;CDS_Target=comp147172_c0_seq1 197 3 .;locus=RLOC_00007881
Chr1	stalkie_big_nohaplotig	exon	51693930	51694165	98	+	.	Parent=comp147172_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	51693932	51694126	.	+	0	Parent=comp147172_c0_seq1.mrna1
Chr1	gffcl	locus	51700313	51702333	.	-	.	ID=RLOC_00007882;geneIDs=ORF2339.path1;transcripts=ORF2339.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51700313	51702333	.	-	.	ID=ORF2339.mrna1;geneID=ORF2339.path1;Name=ORF2339;Dir=sensecoverage=100.0;identity=100.0;matches=873;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007882
Chr1	stalkie_big_nohaplotig	exon	51700313	51700326	100	-	.	Parent=ORF2339.mrna1;Target=ORF2339 860 873 +
Chr1	stalkie_big_nohaplotig	exon	51700400	51701035	100	-	.	Parent=ORF2339.mrna1;Target=ORF2339 224 859 +
Chr1	stalkie_big_nohaplotig	exon	51702111	51702333	100	-	.	Parent=ORF2339.mrna1;Target=ORF2339 1 223 +
Chr1	stalkie_big_nohaplotig	CDS	51700313	51700326	.	-	2	Parent=ORF2339.mrna1;Target=ORF2339 860 873 +
Chr1	stalkie_big_nohaplotig	CDS	51700400	51701035	.	-	2	Parent=ORF2339.mrna1;Target=ORF2339 224 859 +
Chr1	stalkie_big_nohaplotig	CDS	51702111	51702333	.	-	0	Parent=ORF2339.mrna1;Target=ORF2339 1 223 +
Chr1	gffcl	locus	51704730	51705323	.	-	.	ID=RLOC_00007883;geneIDs=comp142939_c1_seq1.path1;transcripts=comp142939_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51704730	51705323	.	-	.	ID=comp142939_c1_seq1.mrna1;geneID=comp142939_c1_seq1.path1;Name=comp142939_c1_seq1;Dir=indeterminatecoverage=71.5;identity=95.6;matches=569;mismatches=19;indels=7;unknowns=0;Target=comp142939_c1_seq1 589 1 .;CDS_Target=comp142939_c1_seq1 558 328 .;locus=RLOC_00007883
Chr1	stalkie_big_nohaplotig	exon	51704730	51705323	95	-	.	Parent=comp142939_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	51704760	51704990	.	-	0	Parent=comp142939_c1_seq1.mrna1
Chr1	gffcl	locus	51705982	51708743	.	+	.	ID=RLOC_00007884;geneIDs=FBgn0036827.1.path1;transcripts=FBgn0036827.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51705982	51708743	.	+	.	ID=FBgn0036827.1.mrna1;geneID=FBgn0036827.1.path1;Name=FBgn0036827.1;Dir=sensecoverage=100.0;identity=99.3;matches=2604;mismatches=18;indels=0;unknowns=0;locus=RLOC_00007884
Chr1	stalkie_big_nohaplotig	exon	51705982	51706068	100	+	.	Parent=FBgn0036827.1.mrna1;Target=FBgn0036827.1 1 87 +
Chr1	stalkie_big_nohaplotig	exon	51706137	51707165	99	+	.	Parent=FBgn0036827.1.mrna1;Target=FBgn0036827.1 88 1116 +
Chr1	stalkie_big_nohaplotig	exon	51707238	51708743	99	+	.	Parent=FBgn0036827.1.mrna1;Target=FBgn0036827.1 1117 2622 +
Chr1	stalkie_big_nohaplotig	CDS	51705982	51706068	.	+	0	Parent=FBgn0036827.1.mrna1;Target=FBgn0036827.1 1 87 +
Chr1	stalkie_big_nohaplotig	CDS	51706137	51707165	.	+	0	Parent=FBgn0036827.1.mrna1;Target=FBgn0036827.1 88 1116 +
Chr1	stalkie_big_nohaplotig	CDS	51707238	51708743	.	+	0	Parent=FBgn0036827.1.mrna1;Target=FBgn0036827.1 1117 2622 +
Chr1	gffcl	locus	51709032	51710818	.	-	.	ID=RLOC_00007885;geneIDs=FBgn0027057.1.path1;transcripts=FBgn0027057.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51709032	51710818	.	-	.	ID=FBgn0027057.1.mrna1;geneID=FBgn0027057.1.path1;Name=FBgn0027057.1;Dir=sensecoverage=100.0;identity=99.4;matches=1605;mismatches=9;indels=0;unknowns=0;locus=RLOC_00007885
Chr1	stalkie_big_nohaplotig	exon	51709032	51709112	98	-	.	Parent=FBgn0027057.1.mrna1;Target=FBgn0027057.1 1534 1614 +
Chr1	stalkie_big_nohaplotig	exon	51709173	51709844	99	-	.	Parent=FBgn0027057.1.mrna1;Target=FBgn0027057.1 862 1533 +
Chr1	stalkie_big_nohaplotig	exon	51709908	51710645	99	-	.	Parent=FBgn0027057.1.mrna1;Target=FBgn0027057.1 124 861 +
Chr1	stalkie_big_nohaplotig	exon	51710696	51710818	100	-	.	Parent=FBgn0027057.1.mrna1;Target=FBgn0027057.1 1 123 +
Chr1	stalkie_big_nohaplotig	CDS	51709032	51709112	.	-	0	Parent=FBgn0027057.1.mrna1;Target=FBgn0027057.1 1534 1614 +
Chr1	stalkie_big_nohaplotig	CDS	51709173	51709844	.	-	0	Parent=FBgn0027057.1.mrna1;Target=FBgn0027057.1 862 1533 +
Chr1	stalkie_big_nohaplotig	CDS	51709908	51710645	.	-	0	Parent=FBgn0027057.1.mrna1;Target=FBgn0027057.1 124 861 +
Chr1	stalkie_big_nohaplotig	CDS	51710696	51710818	.	-	0	Parent=FBgn0027057.1.mrna1;Target=FBgn0027057.1 1 123 +
Chr1	gffcl	locus	51713036	51713750	.	+	.	ID=RLOC_00007886;geneIDs=comp155374_c0_seq1.path1;transcripts=comp155374_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51713036	51713750	.	+	.	ID=comp155374_c0_seq1.mrna1;geneID=comp155374_c0_seq1.path1;Name=comp155374_c0_seq1;Dir=sensecoverage=100.0;identity=96.1;matches=537;mismatches=18;indels=4;unknowns=0;locus=RLOC_00007886
Chr1	stalkie_big_nohaplotig	exon	51713036	51713063	100	+	.	Parent=comp155374_c0_seq1.mrna1;Target=comp155374_c0_seq1 1 28 +
Chr1	stalkie_big_nohaplotig	exon	51713168	51713249	96	+	.	Parent=comp155374_c0_seq1.mrna1;Target=comp155374_c0_seq1 29 110 +
Chr1	stalkie_big_nohaplotig	exon	51713302	51713750	95	+	.	Parent=comp155374_c0_seq1.mrna1;Target=comp155374_c0_seq1 111 555 +
Chr1	stalkie_big_nohaplotig	CDS	51713038	51713063	.	+	0	Parent=comp155374_c0_seq1.mrna1;Target=comp155374_c0_seq1 3 28 +
Chr1	stalkie_big_nohaplotig	CDS	51713168	51713183	.	+	1	Parent=comp155374_c0_seq1.mrna1;Target=comp155374_c0_seq1 29 44 +
Chr1	gffcl	locus	51713923	51715126	.	-	.	ID=RLOC_00007887;geneIDs=ORF1257.path1;transcripts=ORF1257.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51713923	51715126	.	-	.	ID=ORF1257.mrna1;geneID=ORF1257.path1;Name=ORF1257;Dir=sensecoverage=99.6;identity=97.6;matches=1131;mismatches=19;indels=9;unknowns=0;locus=RLOC_00007887
Chr1	stalkie_big_nohaplotig	exon	51713923	51714916	97	-	.	Parent=ORF1257.mrna1;Target=ORF1257 157 1159 +
Chr1	stalkie_big_nohaplotig	exon	51714971	51715126	97	-	.	Parent=ORF1257.mrna1;Target=ORF1257 1 156 +
Chr1	stalkie_big_nohaplotig	CDS	51713924	51714916	.	-	0	Parent=ORF1257.mrna1;Target=ORF1257 157 1158 +
Chr1	stalkie_big_nohaplotig	CDS	51714971	51715126	.	-	0	Parent=ORF1257.mrna1;Target=ORF1257 1 156 +
Chr1	gffcl	locus	51716008	51718103	.	+	.	ID=RLOC_00007888;geneIDs=FBgn0036838.1.path1;transcripts=FBgn0036838.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51716008	51718103	.	+	.	ID=FBgn0036838.1.mrna1;geneID=FBgn0036838.1.path1;Name=FBgn0036838.1;Dir=sensecoverage=99.0;identity=99.8;matches=1924;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007888
Chr1	stalkie_big_nohaplotig	exon	51716008	51716190	100	+	.	Parent=FBgn0036838.1.mrna1;Target=FBgn0036838.1 1 183 +
Chr1	stalkie_big_nohaplotig	exon	51716242	51716409	100	+	.	Parent=FBgn0036838.1.mrna1;Target=FBgn0036838.1 184 351 +
Chr1	stalkie_big_nohaplotig	exon	51716467	51717589	99	+	.	Parent=FBgn0036838.1.mrna1;Target=FBgn0036838.1 352 1474 +
Chr1	stalkie_big_nohaplotig	exon	51717650	51718103	99	+	.	Parent=FBgn0036838.1.mrna1;Target=FBgn0036838.1 1475 1928 +
Chr1	stalkie_big_nohaplotig	CDS	51716008	51716190	.	+	0	Parent=FBgn0036838.1.mrna1;Target=FBgn0036838.1 1 183 +
Chr1	stalkie_big_nohaplotig	CDS	51716242	51716409	.	+	0	Parent=FBgn0036838.1.mrna1;Target=FBgn0036838.1 184 351 +
Chr1	stalkie_big_nohaplotig	CDS	51716467	51717589	.	+	0	Parent=FBgn0036838.1.mrna1;Target=FBgn0036838.1 352 1474 +
Chr1	stalkie_big_nohaplotig	CDS	51717650	51718101	.	+	2	Parent=FBgn0036838.1.mrna1;Target=FBgn0036838.1 1475 1926 +
Chr1	gffcl	locus	51725634	51725997	.	+	.	ID=RLOC_00007889;geneIDs=comp150088_c1_seq1.path1;transcripts=comp150088_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51725634	51725997	.	+	.	ID=comp150088_c1_seq1.mrna1;geneID=comp150088_c1_seq1.path1;Name=comp150088_c1_seq1;Dir=indeterminatecoverage=98.9;identity=99.5;matches=362;mismatches=2;indels=0;unknowns=0;Target=comp150088_c1_seq1 364 1 .;CDS_Target=comp150088_c1_seq1 90 1 .;locus=RLOC_00007889
Chr1	stalkie_big_nohaplotig	exon	51725634	51725997	99	+	.	Parent=comp150088_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	51725634	51725723	.	+	0	Parent=comp150088_c1_seq1.mrna1
Chr1	gffcl	locus	51743744	51744525	.	.	.	ID=RLOC_00007891;geneIDs=comp117642_c0_seq1.path1,comp146195_c0_seq1.path2;transcripts=comp146195_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	51744080	51744525	.	+	.	ID=comp146195_c0_seq1.mrna2;geneID=comp146195_c0_seq1.path2;Name=comp146195_c0_seq1;Dir=indeterminatecoverage=85.7;identity=94.9;matches=425;mismatches=6;indels=17;unknowns=0;Target=comp146195_c0_seq1 505 73 .;CDS_Target=comp146195_c0_seq1 86 73 .;locus=RLOC_00007891
Chr1	stalkie_big_nohaplotig	exon	51744080	51744525	94	+	.	Parent=comp146195_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	51744080	51744093	.	+	1	Parent=comp146195_c0_seq1.mrna2
Chr1	gffcl	locus	51750333	51754859	.	+	.	ID=RLOC_00007892;geneIDs=FBgn0036837.1.path1;transcripts=FBgn0036837.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51750333	51754859	.	+	.	ID=FBgn0036837.1.mrna1;geneID=FBgn0036837.1.path1;Name=FBgn0036837.1;Dir=sensecoverage=100.0;identity=99.9;matches=2124;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007892
Chr1	stalkie_big_nohaplotig	exon	51750333	51750557	100	+	.	Parent=FBgn0036837.1.mrna1;Target=FBgn0036837.1 1 225 +
Chr1	stalkie_big_nohaplotig	exon	51752958	51754859	99	+	.	Parent=FBgn0036837.1.mrna1;Target=FBgn0036837.1 226 2127 +
Chr1	stalkie_big_nohaplotig	CDS	51750333	51750557	.	+	0	Parent=FBgn0036837.1.mrna1;Target=FBgn0036837.1 1 225 +
Chr1	stalkie_big_nohaplotig	CDS	51752958	51754859	.	+	0	Parent=FBgn0036837.1.mrna1;Target=FBgn0036837.1 226 2127 +
Chr1	gffcl	locus	51765535	51767910	.	+	.	ID=RLOC_00007893;geneIDs=comp140610_c0_seq1.path1,comp157674_c0_seq1.path1;transcripts=comp157674_c0_seq1.mrna1,comp140610_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51765535	51766501	.	+	.	ID=comp157674_c0_seq1.mrna1;geneID=comp157674_c0_seq1.path1;Name=comp157674_c0_seq1;Dir=sensecoverage=60.2;identity=97.4;matches=819;mismatches=9;indels=13;unknowns=0;Target=comp157674_c0_seq1 508 642 +;locus=RLOC_00007893
Chr1	stalkie_big_nohaplotig	exon	51765535	51766008	99	+	.	Parent=comp157674_c0_seq1.mrna1;Target=comp157674_c0_seq1 372 846 +
Chr1	stalkie_big_nohaplotig	exon	51766065	51766147	100	+	.	Parent=comp157674_c0_seq1.mrna1;Target=comp157674_c0_seq1 847 929 +
Chr1	stalkie_big_nohaplotig	exon	51766231	51766501	93	+	.	Parent=comp157674_c0_seq1.mrna1;Target=comp157674_c0_seq1 930 1212 +
Chr1	stalkie_big_nohaplotig	CDS	51765670	51765804	.	+	0	Parent=comp157674_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51766333	51767910	.	+	.	ID=comp140610_c0_seq1.mrna1;geneID=comp140610_c0_seq1.path1;Name=comp140610_c0_seq1;Dir=indeterminatecoverage=95.1;identity=97.3;matches=327;mismatches=5;indels=4;unknowns=0;locus=RLOC_00007893
Chr1	stalkie_big_nohaplotig	exon	51766333	51766356	100	+	.	Parent=comp140610_c0_seq1.mrna1;Target=comp140610_c0_seq1 24 1 .
Chr1	stalkie_big_nohaplotig	exon	51767544	51767610	97	+	.	Parent=comp140610_c0_seq1.mrna1;Target=comp140610_c0_seq1 91 25 .
Chr1	stalkie_big_nohaplotig	exon	51767666	51767910	97	+	.	Parent=comp140610_c0_seq1.mrna1;Target=comp140610_c0_seq1 332 92 .
Chr1	stalkie_big_nohaplotig	CDS	51766334	51766356	.	+	0	Parent=comp140610_c0_seq1.mrna1;Target=comp140610_c0_seq1 24 2 .
Chr1	stalkie_big_nohaplotig	CDS	51767544	51767550	.	+	1	Parent=comp140610_c0_seq1.mrna1;Target=comp140610_c0_seq1 31 25 .
Chr1	gffcl	locus	51772657	51773955	.	-	.	ID=RLOC_00007894;geneIDs=comp146426_c0_seq1.path1;transcripts=comp146426_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51772657	51773955	.	-	.	ID=comp146426_c0_seq1.mrna1;geneID=comp146426_c0_seq1.path1;Name=comp146426_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1295;mismatches=4;indels=0;unknowns=0;Target=comp146426_c0_seq1 1299 1 .;CDS_Target=comp146426_c0_seq1 879 358 .;locus=RLOC_00007894
Chr1	stalkie_big_nohaplotig	exon	51772657	51773955	99	-	.	Parent=comp146426_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	51773077	51773598	.	-	0	Parent=comp146426_c0_seq1.mrna1
Chr1	gffcl	locus	51793471	51794632	.	+	.	ID=RLOC_00007895;geneIDs=comp158914_c0_seq1.path1;transcripts=comp158914_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51793471	51794632	.	+	.	ID=comp158914_c0_seq1.mrna1;geneID=comp158914_c0_seq1.path1;Name=comp158914_c0_seq1;Dir=sensecoverage=98.4;identity=98.9;matches=1090;mismatches=12;indels=0;unknowns=0;locus=RLOC_00007895
Chr1	stalkie_big_nohaplotig	exon	51793471	51793993	99	+	.	Parent=comp158914_c0_seq1.mrna1;Target=comp158914_c0_seq1 1 523 +
Chr1	stalkie_big_nohaplotig	exon	51794054	51794632	98	+	.	Parent=comp158914_c0_seq1.mrna1;Target=comp158914_c0_seq1 524 1102 +
Chr1	stalkie_big_nohaplotig	CDS	51793576	51793993	.	+	0	Parent=comp158914_c0_seq1.mrna1;Target=comp158914_c0_seq1 106 523 +
Chr1	stalkie_big_nohaplotig	CDS	51794054	51794166	.	+	2	Parent=comp158914_c0_seq1.mrna1;Target=comp158914_c0_seq1 524 636 +
Chr1	gffcl	locus	51823798	51824633	.	-	.	ID=RLOC_00007896;geneIDs=comp151604_c0_seq1.path1;transcripts=comp151604_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51823798	51824633	.	-	.	ID=comp151604_c0_seq1.mrna1;geneID=comp151604_c0_seq1.path1;Name=comp151604_c0_seq1;Dir=antisensecoverage=95.9;identity=99.2;matches=769;mismatches=5;indels=1;unknowns=0;locus=RLOC_00007896
Chr1	stalkie_big_nohaplotig	exon	51823798	51824237	98	-	.	Parent=comp151604_c0_seq1.mrna1;Target=comp151604_c0_seq1 15 455 -
Chr1	stalkie_big_nohaplotig	exon	51824300	51824633	100	-	.	Parent=comp151604_c0_seq1.mrna1;Target=comp151604_c0_seq1 456 789 -
Chr1	stalkie_big_nohaplotig	CDS	51824167	51824237	.	-	2	Parent=comp151604_c0_seq1.mrna1;Target=comp151604_c0_seq1 385 455 .
Chr1	stalkie_big_nohaplotig	CDS	51824300	51824540	.	-	0	Parent=comp151604_c0_seq1.mrna1;Target=comp151604_c0_seq1 456 696 .
Chr1	gffcl	locus	51839613	51840319	.	+	.	ID=RLOC_00007897;geneIDs=comp145563_c0_seq1.path1;transcripts=comp145563_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51839613	51840319	.	+	.	ID=comp145563_c0_seq1.mrna1;geneID=comp145563_c0_seq1.path1;Name=comp145563_c0_seq1;Dir=sensecoverage=96.7;identity=99.8;matches=649;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007897
Chr1	stalkie_big_nohaplotig	exon	51839613	51839952	100	+	.	Parent=comp145563_c0_seq1.mrna1;Target=comp145563_c0_seq1 2 341 +
Chr1	stalkie_big_nohaplotig	exon	51840010	51840319	99	+	.	Parent=comp145563_c0_seq1.mrna1;Target=comp145563_c0_seq1 342 651 +
Chr1	stalkie_big_nohaplotig	CDS	51839739	51839952	.	+	0	Parent=comp145563_c0_seq1.mrna1;Target=comp145563_c0_seq1 128 341 +
Chr1	stalkie_big_nohaplotig	CDS	51840010	51840137	.	+	2	Parent=comp145563_c0_seq1.mrna1;Target=comp145563_c0_seq1 342 469 +
Chr1	gffcl	locus	51856110	51857515	.	+	.	ID=RLOC_00007898;geneIDs=FBgn0036831.2.path1;transcripts=FBgn0036831.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51856110	51857515	.	+	.	ID=FBgn0036831.2.mrna1;geneID=FBgn0036831.2.path1;Name=FBgn0036831.2;Dir=sensecoverage=100.0;identity=99.4;matches=1333;mismatches=8;indels=0;unknowns=0;locus=RLOC_00007898
Chr1	stalkie_big_nohaplotig	exon	51856110	51856326	98	+	.	Parent=FBgn0036831.2.mrna1;Target=FBgn0036831.2 1 217 +
Chr1	stalkie_big_nohaplotig	exon	51856392	51857515	99	+	.	Parent=FBgn0036831.2.mrna1;Target=FBgn0036831.2 218 1341 +
Chr1	stalkie_big_nohaplotig	CDS	51856110	51856326	.	+	0	Parent=FBgn0036831.2.mrna1;Target=FBgn0036831.2 1 217 +
Chr1	stalkie_big_nohaplotig	CDS	51856392	51857515	.	+	2	Parent=FBgn0036831.2.mrna1;Target=FBgn0036831.2 218 1341 +
Chr1	gffcl	locus	51860530	51861830	.	-	.	ID=RLOC_00007899;geneIDs=FBgn0036833.1.path1;transcripts=FBgn0036833.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51860530	51861830	.	-	.	ID=FBgn0036833.1.mrna1;geneID=FBgn0036833.1.path1;Name=FBgn0036833.1;Dir=sensecoverage=100.0;identity=99.7;matches=1238;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007899
Chr1	stalkie_big_nohaplotig	exon	51860530	51861647	99	-	.	Parent=FBgn0036833.1.mrna1;Target=FBgn0036833.1 125 1242 +
Chr1	stalkie_big_nohaplotig	exon	51861707	51861830	98	-	.	Parent=FBgn0036833.1.mrna1;Target=FBgn0036833.1 1 124 +
Chr1	stalkie_big_nohaplotig	CDS	51860530	51861647	.	-	2	Parent=FBgn0036833.1.mrna1;Target=FBgn0036833.1 125 1242 +
Chr1	stalkie_big_nohaplotig	CDS	51861707	51861830	.	-	0	Parent=FBgn0036833.1.mrna1;Target=FBgn0036833.1 1 124 +
Chr1	gffcl	locus	51866103	51866724	.	+	.	ID=RLOC_00007900;geneIDs=comp149930_c0_seq1.path1;transcripts=comp149930_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51866103	51866724	.	+	.	ID=comp149930_c0_seq1.mrna1;geneID=comp149930_c0_seq1.path1;Name=comp149930_c0_seq1;Dir=indeterminatecoverage=99.8;identity=96.1;matches=610;mismatches=12;indels=13;unknowns=0;Target=comp149930_c0_seq1 636 2 .;CDS_Target=comp149930_c0_seq1 325 218 .;locus=RLOC_00007900
Chr1	stalkie_big_nohaplotig	exon	51866103	51866724	96	+	.	Parent=comp149930_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	51866319	51866420	.	+	0	Parent=comp149930_c0_seq1.mrna1
Chr1	gffcl	locus	51867393	51868354	.	-	.	ID=RLOC_00007901;geneIDs=comp154778_c0_seq1.path1;transcripts=comp154778_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51867393	51868354	.	-	.	ID=comp154778_c0_seq1.mrna1;geneID=comp154778_c0_seq1.path1;Name=comp154778_c0_seq1;Dir=indeterminatecoverage=99.1;identity=97.2;matches=936;mismatches=21;indels=6;unknowns=0;Target=comp154778_c0_seq1 967 10 .;CDS_Target=comp154778_c0_seq1 94 11 .;locus=RLOC_00007901
Chr1	stalkie_big_nohaplotig	exon	51867393	51868354	97	-	.	Parent=comp154778_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	51868270	51868353	.	-	0	Parent=comp154778_c0_seq1.mrna1
Chr1	gffcl	locus	51868457	51870521	.	-	.	ID=RLOC_00007902;geneIDs=comp162992_c0_seq1.path1;transcripts=comp162992_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51868457	51870521	.	-	.	ID=comp162992_c0_seq1.mrna1;geneID=comp162992_c0_seq1.path1;Name=comp162992_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.3;matches=2000;mismatches=64;indels=13;unknowns=0;Target=comp162992_c0_seq1 2078 3 .;CDS_Target=comp162992_c0_seq1 1430 1248 .;locus=RLOC_00007902
Chr1	stalkie_big_nohaplotig	exon	51868457	51870521	96	-	.	Parent=comp162992_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	51869099	51869281	.	-	0	Parent=comp162992_c0_seq1.mrna1
Chr1	gffcl	locus	51873225	51914052	.	-	.	ID=RLOC_00007903;geneIDs=FBgn0052204.1.path1;transcripts=FBgn0052204.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51873225	51914052	.	-	.	ID=FBgn0052204.1.mrna1;geneID=FBgn0052204.1.path1;Name=FBgn0052204.1;Dir=sensecoverage=100.0;identity=99.9;matches=839;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007903
Chr1	stalkie_big_nohaplotig	exon	51873225	51873536	99	-	.	Parent=FBgn0052204.1.mrna1;Target=FBgn0052204.1 529 840 +
Chr1	stalkie_big_nohaplotig	exon	51884239	51884298	100	-	.	Parent=FBgn0052204.1.mrna1;Target=FBgn0052204.1 469 528 +
Chr1	stalkie_big_nohaplotig	exon	51892525	51892632	100	-	.	Parent=FBgn0052204.1.mrna1;Target=FBgn0052204.1 361 468 +
Chr1	stalkie_big_nohaplotig	exon	51908105	51908190	100	-	.	Parent=FBgn0052204.1.mrna1;Target=FBgn0052204.1 275 360 +
Chr1	stalkie_big_nohaplotig	exon	51910172	51910259	100	-	.	Parent=FBgn0052204.1.mrna1;Target=FBgn0052204.1 187 274 +
Chr1	stalkie_big_nohaplotig	exon	51913867	51914052	100	-	.	Parent=FBgn0052204.1.mrna1;Target=FBgn0052204.1 1 186 +
Chr1	stalkie_big_nohaplotig	CDS	51873225	51873536	.	-	0	Parent=FBgn0052204.1.mrna1;Target=FBgn0052204.1 529 840 +
Chr1	stalkie_big_nohaplotig	CDS	51884239	51884298	.	-	0	Parent=FBgn0052204.1.mrna1;Target=FBgn0052204.1 469 528 +
Chr1	stalkie_big_nohaplotig	CDS	51892525	51892632	.	-	0	Parent=FBgn0052204.1.mrna1;Target=FBgn0052204.1 361 468 +
Chr1	stalkie_big_nohaplotig	CDS	51908105	51908190	.	-	2	Parent=FBgn0052204.1.mrna1;Target=FBgn0052204.1 275 360 +
Chr1	stalkie_big_nohaplotig	CDS	51910172	51910259	.	-	0	Parent=FBgn0052204.1.mrna1;Target=FBgn0052204.1 187 274 +
Chr1	stalkie_big_nohaplotig	CDS	51913867	51914052	.	-	0	Parent=FBgn0052204.1.mrna1;Target=FBgn0052204.1 1 186 +
Chr1	gffcl	locus	51921692	53231208	.	-	.	ID=RLOC_00007904;geneIDs=comp94360_c0_seq1.path1,comp118421_c0_seq1.path1;transcripts=comp118421_c0_seq1.mrna1,comp94360_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51921692	53231208	.	-	.	ID=comp118421_c0_seq1.mrna1;geneID=comp118421_c0_seq1.path1;Name=comp118421_c0_seq1;Dir=indeterminatecoverage=72.5;identity=95.9;matches=399;mismatches=7;indels=10;unknowns=0;Target=comp118421_c0_seq1 219 151 .;locus=RLOC_00007904
Chr1	stalkie_big_nohaplotig	exon	51921692	51921696	100	-	.	Parent=comp118421_c0_seq1.mrna1;Target=comp118421_c0_seq1 412 408 .
Chr1	stalkie_big_nohaplotig	exon	51922912	51922923	83	-	.	Parent=comp118421_c0_seq1.mrna1;Target=comp118421_c0_seq1 407 396 .
Chr1	stalkie_big_nohaplotig	exon	51929319	51929330	91	-	.	Parent=comp118421_c0_seq1.mrna1;Target=comp118421_c0_seq1 395 384 .
Chr1	stalkie_big_nohaplotig	exon	51940162	51940176	82	-	.	Parent=comp118421_c0_seq1.mrna1;Target=comp118421_c0_seq1 383 367 .
Chr1	stalkie_big_nohaplotig	exon	51945173	51945176	100	-	.	Parent=comp118421_c0_seq1.mrna1;Target=comp118421_c0_seq1 366 363 .
Chr1	stalkie_big_nohaplotig	exon	51951284	51951289	50	-	.	Parent=comp118421_c0_seq1.mrna1;Target=comp118421_c0_seq1 362 357 .
Chr1	stalkie_big_nohaplotig	exon	51956079	51956084	100	-	.	Parent=comp118421_c0_seq1.mrna1;Target=comp118421_c0_seq1 356 351 .
Chr1	stalkie_big_nohaplotig	exon	51958485	51958489	100	-	.	Parent=comp118421_c0_seq1.mrna1;Target=comp118421_c0_seq1 350 346 .
Chr1	stalkie_big_nohaplotig	exon	51976849	51976852	100	-	.	Parent=comp118421_c0_seq1.mrna1;Target=comp118421_c0_seq1 345 342 .
Chr1	stalkie_big_nohaplotig	exon	51983592	51983598	100	-	.	Parent=comp118421_c0_seq1.mrna1;Target=comp118421_c0_seq1 341 335 .
Chr1	stalkie_big_nohaplotig	exon	51990310	51990314	100	-	.	Parent=comp118421_c0_seq1.mrna1;Target=comp118421_c0_seq1 334 330 .
Chr1	stalkie_big_nohaplotig	exon	53230880	53231208	97	-	.	Parent=comp118421_c0_seq1.mrna1;Target=comp118421_c0_seq1 329 1 .
Chr1	stalkie_big_nohaplotig	CDS	53230990	53231058	.	-	0	Parent=comp118421_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53230369	53230880	.	-	.	ID=comp94360_c0_seq1.mrna1;geneID=comp94360_c0_seq1.path1;Name=comp94360_c0_seq1;Dir=indeterminatecoverage=57.0;identity=99.8;matches=511;mismatches=1;indels=0;unknowns=0;Target=comp94360_c0_seq1 512 1 .;CDS_Target=comp94360_c0_seq1 191 141 .;locus=RLOC_00007904
Chr1	stalkie_big_nohaplotig	exon	53230369	53230880	99	-	.	Parent=comp94360_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	53230690	53230740	.	-	0	Parent=comp94360_c0_seq1.mrna1
Chr1	gffcl	locus	51984106	51984508	.	-	.	ID=RLOC_00007905;geneIDs=comp153615_c1_seq1.path1;transcripts=comp153615_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	51984106	51984508	.	-	.	ID=comp153615_c1_seq1.mrna1;geneID=comp153615_c1_seq1.path1;Name=comp153615_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=403;mismatches=0;indels=0;unknowns=0;Target=comp153615_c1_seq1 403 1 .;CDS_Target=comp153615_c1_seq1 96 1 .;locus=RLOC_00007905
Chr1	stalkie_big_nohaplotig	exon	51984106	51984508	100	-	.	Parent=comp153615_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	51984413	51984508	.	-	0	Parent=comp153615_c1_seq1.mrna1
Chr1	gffcl	locus	52012315	52013634	.	+	.	ID=RLOC_00007906;geneIDs=FBgn0036834.1.path1;transcripts=FBgn0036834.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52012315	52013634	.	+	.	ID=FBgn0036834.1.mrna1;geneID=FBgn0036834.1.path1;Name=FBgn0036834.1;Dir=sensecoverage=100.0;identity=99.8;matches=958;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007906
Chr1	stalkie_big_nohaplotig	exon	52012315	52012435	100	+	.	Parent=FBgn0036834.1.mrna1;Target=FBgn0036834.1 1 121 +
Chr1	stalkie_big_nohaplotig	exon	52012526	52013007	99	+	.	Parent=FBgn0036834.1.mrna1;Target=FBgn0036834.1 122 603 +
Chr1	stalkie_big_nohaplotig	exon	52013108	52013233	100	+	.	Parent=FBgn0036834.1.mrna1;Target=FBgn0036834.1 604 729 +
Chr1	stalkie_big_nohaplotig	exon	52013342	52013468	100	+	.	Parent=FBgn0036834.1.mrna1;Target=FBgn0036834.1 730 856 +
Chr1	stalkie_big_nohaplotig	exon	52013531	52013634	100	+	.	Parent=FBgn0036834.1.mrna1;Target=FBgn0036834.1 857 960 +
Chr1	stalkie_big_nohaplotig	CDS	52012315	52012435	.	+	0	Parent=FBgn0036834.1.mrna1;Target=FBgn0036834.1 1 121 +
Chr1	stalkie_big_nohaplotig	CDS	52012526	52013007	.	+	2	Parent=FBgn0036834.1.mrna1;Target=FBgn0036834.1 122 603 +
Chr1	stalkie_big_nohaplotig	CDS	52013108	52013233	.	+	0	Parent=FBgn0036834.1.mrna1;Target=FBgn0036834.1 604 729 +
Chr1	stalkie_big_nohaplotig	CDS	52013342	52013468	.	+	0	Parent=FBgn0036834.1.mrna1;Target=FBgn0036834.1 730 856 +
Chr1	stalkie_big_nohaplotig	CDS	52013531	52013634	.	+	2	Parent=FBgn0036834.1.mrna1;Target=FBgn0036834.1 857 960 +
Chr1	gffcl	locus	52040366	52042705	.	+	.	ID=RLOC_00007907;geneIDs=comp161019_c0_seq1.path1;transcripts=comp161019_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52040366	52042705	.	+	.	ID=comp161019_c0_seq1.mrna1;geneID=comp161019_c0_seq1.path1;Name=comp161019_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=1398;mismatches=7;indels=0;unknowns=0;locus=RLOC_00007907
Chr1	stalkie_big_nohaplotig	exon	52040366	52040819	98	+	.	Parent=comp161019_c0_seq1.mrna1;Target=comp161019_c0_seq1 1 454 +
Chr1	stalkie_big_nohaplotig	exon	52040970	52041113	100	+	.	Parent=comp161019_c0_seq1.mrna1;Target=comp161019_c0_seq1 455 598 +
Chr1	stalkie_big_nohaplotig	exon	52041899	52042705	99	+	.	Parent=comp161019_c0_seq1.mrna1;Target=comp161019_c0_seq1 599 1405 +
Chr1	stalkie_big_nohaplotig	CDS	52041063	52041113	.	+	0	Parent=comp161019_c0_seq1.mrna1;Target=comp161019_c0_seq1 548 598 +
Chr1	stalkie_big_nohaplotig	CDS	52041899	52042345	.	+	0	Parent=comp161019_c0_seq1.mrna1;Target=comp161019_c0_seq1 599 1045 +
Chr1	gffcl	locus	52091732	52092402	.	-	.	ID=RLOC_00007908;geneIDs=comp154566_c0_seq1.path1;transcripts=comp154566_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52091732	52092402	.	-	.	ID=comp154566_c0_seq1.mrna1;geneID=comp154566_c0_seq1.path1;Name=comp154566_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.3;matches=666;mismatches=5;indels=0;unknowns=0;Target=comp154566_c0_seq1 673 3 .;CDS_Target=comp154566_c0_seq1 579 445 .;locus=RLOC_00007908
Chr1	stalkie_big_nohaplotig	exon	52091732	52092402	99	-	.	Parent=comp154566_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52091826	52091960	.	-	0	Parent=comp154566_c0_seq1.mrna1
Chr1	gffcl	locus	52103800	52103945	.	-	.	ID=RLOC_00007909;geneIDs=comp135128_c0_seq1.path2;transcripts=comp135128_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	52103800	52103945	.	-	.	ID=comp135128_c0_seq1.mrna2;geneID=comp135128_c0_seq1.path2;Name=comp135128_c0_seq1;Dir=indeterminatecoverage=46.9;identity=84.2;matches=123;mismatches=23;indels=0;unknowns=0;Target=comp135128_c0_seq1 309 164 .;CDS_Target=comp135128_c0_seq1 215 165 .;locus=RLOC_00007909
Chr1	stalkie_big_nohaplotig	exon	52103800	52103945	84	-	.	Parent=comp135128_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	52103894	52103944	.	-	0	Parent=comp135128_c0_seq1.mrna2
Chr1	gffcl	locus	52106351	52107292	.	+	.	ID=RLOC_00007910;geneIDs=ORF2274.path1;transcripts=ORF2274.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52106351	52107292	.	+	.	ID=ORF2274.mrna1;geneID=ORF2274.path1;Name=ORF2274;Dir=sensecoverage=100.0;identity=99.5;matches=881;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007910
Chr1	stalkie_big_nohaplotig	exon	52106351	52106842	99	+	.	Parent=ORF2274.mrna1;Target=ORF2274 1 492 +
Chr1	stalkie_big_nohaplotig	exon	52106900	52107292	99	+	.	Parent=ORF2274.mrna1;Target=ORF2274 493 885 +
Chr1	stalkie_big_nohaplotig	CDS	52106351	52106842	.	+	0	Parent=ORF2274.mrna1;Target=ORF2274 1 492 +
Chr1	stalkie_big_nohaplotig	CDS	52106900	52107292	.	+	0	Parent=ORF2274.mrna1;Target=ORF2274 493 885 +
Chr1	gffcl	locus	52108320	52111401	.	-	.	ID=RLOC_00007911;geneIDs=FBgn0036828.1.path1;transcripts=FBgn0036828.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52108320	52111401	.	-	.	ID=FBgn0036828.1.mrna1;geneID=FBgn0036828.1.path1;Name=FBgn0036828.1;Dir=sensecoverage=100.0;identity=99.1;matches=2792;mismatches=25;indels=0;unknowns=0;locus=RLOC_00007911
Chr1	stalkie_big_nohaplotig	exon	52108320	52108541	100	-	.	Parent=FBgn0036828.1.mrna1;Target=FBgn0036828.1 2596 2817 +
Chr1	stalkie_big_nohaplotig	exon	52108607	52109560	99	-	.	Parent=FBgn0036828.1.mrna1;Target=FBgn0036828.1 1642 2595 +
Chr1	stalkie_big_nohaplotig	exon	52109622	52110822	98	-	.	Parent=FBgn0036828.1.mrna1;Target=FBgn0036828.1 441 1641 +
Chr1	stalkie_big_nohaplotig	exon	52110886	52111203	99	-	.	Parent=FBgn0036828.1.mrna1;Target=FBgn0036828.1 123 440 +
Chr1	stalkie_big_nohaplotig	exon	52111280	52111401	98	-	.	Parent=FBgn0036828.1.mrna1;Target=FBgn0036828.1 1 122 +
Chr1	stalkie_big_nohaplotig	CDS	52108320	52108541	.	-	0	Parent=FBgn0036828.1.mrna1;Target=FBgn0036828.1 2596 2817 +
Chr1	stalkie_big_nohaplotig	CDS	52108607	52109560	.	-	0	Parent=FBgn0036828.1.mrna1;Target=FBgn0036828.1 1642 2595 +
Chr1	stalkie_big_nohaplotig	CDS	52109622	52110822	.	-	1	Parent=FBgn0036828.1.mrna1;Target=FBgn0036828.1 441 1641 +
Chr1	stalkie_big_nohaplotig	CDS	52110886	52111203	.	-	1	Parent=FBgn0036828.1.mrna1;Target=FBgn0036828.1 123 440 +
Chr1	stalkie_big_nohaplotig	CDS	52111280	52111401	.	-	0	Parent=FBgn0036828.1.mrna1;Target=FBgn0036828.1 1 122 +
Chr1	gffcl	locus	52112191	52113742	.	-	.	ID=RLOC_00007912;geneIDs=FBgn0036839.1.path1;transcripts=FBgn0036839.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52112191	52113742	.	-	.	ID=FBgn0036839.1.mrna1;geneID=FBgn0036839.1.path1;Name=FBgn0036839.1;Dir=sensecoverage=99.8;identity=99.7;matches=1424;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007912
Chr1	stalkie_big_nohaplotig	exon	52112191	52112307	100	-	.	Parent=FBgn0036839.1.mrna1;Target=FBgn0036839.1 1315 1431 +
Chr1	stalkie_big_nohaplotig	exon	52112371	52112534	99	-	.	Parent=FBgn0036839.1.mrna1;Target=FBgn0036839.1 1151 1314 +
Chr1	stalkie_big_nohaplotig	exon	52112596	52113742	99	-	.	Parent=FBgn0036839.1.mrna1;Target=FBgn0036839.1 4 1150 +
Chr1	stalkie_big_nohaplotig	CDS	52112191	52112307	.	-	0	Parent=FBgn0036839.1.mrna1;Target=FBgn0036839.1 1315 1431 +
Chr1	stalkie_big_nohaplotig	CDS	52112371	52112534	.	-	2	Parent=FBgn0036839.1.mrna1;Target=FBgn0036839.1 1151 1314 +
Chr1	stalkie_big_nohaplotig	CDS	52112596	52113742	.	-	0	Parent=FBgn0036839.1.mrna1;Target=FBgn0036839.1 4 1150 +
Chr1	gffcl	locus	52117093	52117789	.	-	.	ID=RLOC_00007913;geneIDs=comp135843_c0_seq1.path1;transcripts=comp135843_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52117093	52117789	.	-	.	ID=comp135843_c0_seq1.mrna1;geneID=comp135843_c0_seq1.path1;Name=comp135843_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=695;mismatches=1;indels=1;unknowns=0;Target=comp135843_c0_seq1 696 1 .;CDS_Target=comp135843_c0_seq1 243 34 .;locus=RLOC_00007913
Chr1	stalkie_big_nohaplotig	exon	52117093	52117789	99	-	.	Parent=comp135843_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52117546	52117755	.	-	0	Parent=comp135843_c0_seq1.mrna1
Chr1	gffcl	locus	52123921	52125662	.	-	.	ID=RLOC_00007914;geneIDs=comp158250_c0_seq1.path1;transcripts=comp158250_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52123921	52125662	.	-	.	ID=comp158250_c0_seq1.mrna1;geneID=comp158250_c0_seq1.path1;Name=comp158250_c0_seq1;Dir=sensecoverage=95.8;identity=99.5;matches=918;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007914
Chr1	stalkie_big_nohaplotig	exon	52123921	52124168	99	-	.	Parent=comp158250_c0_seq1.mrna1;Target=comp158250_c0_seq1 714 961 +
Chr1	stalkie_big_nohaplotig	exon	52124862	52125096	99	-	.	Parent=comp158250_c0_seq1.mrna1;Target=comp158250_c0_seq1 479 713 +
Chr1	stalkie_big_nohaplotig	exon	52125156	52125284	100	-	.	Parent=comp158250_c0_seq1.mrna1;Target=comp158250_c0_seq1 350 478 +
Chr1	stalkie_big_nohaplotig	exon	52125352	52125662	99	-	.	Parent=comp158250_c0_seq1.mrna1;Target=comp158250_c0_seq1 39 349 +
Chr1	stalkie_big_nohaplotig	CDS	52124908	52125096	.	-	0	Parent=comp158250_c0_seq1.mrna1;Target=comp158250_c0_seq1 479 667 +
Chr1	stalkie_big_nohaplotig	CDS	52125156	52125284	.	-	0	Parent=comp158250_c0_seq1.mrna1;Target=comp158250_c0_seq1 350 478 +
Chr1	stalkie_big_nohaplotig	CDS	52125352	52125564	.	-	0	Parent=comp158250_c0_seq1.mrna1;Target=comp158250_c0_seq1 137 349 +
Chr1	gffcl	locus	52127101	52127925	.	+	.	ID=RLOC_00007915;geneIDs=comp1001232_c0_seq1.path1;transcripts=comp1001232_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52127101	52127925	.	+	.	ID=comp1001232_c0_seq1.mrna1;geneID=comp1001232_c0_seq1.path1;Name=comp1001232_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=825;mismatches=0;indels=0;unknowns=0;Target=comp1001232_c0_seq1 825 1 .;CDS_Target=comp1001232_c0_seq1 388 254 .;locus=RLOC_00007915
Chr1	stalkie_big_nohaplotig	exon	52127101	52127925	100	+	.	Parent=comp1001232_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52127354	52127488	.	+	0	Parent=comp1001232_c0_seq1.mrna1
Chr1	gffcl	locus	52136152	52173947	.	-	.	ID=RLOC_00007916;geneIDs=FBgn0002945.1.path1,comp158617_c2_seq1.path1;transcripts=FBgn0002945.1.mrna1,comp158617_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52136152	52146178	.	-	.	ID=FBgn0002945.1.mrna1;geneID=FBgn0002945.1.path1;Name=FBgn0002945.1;Dir=sensecoverage=99.9;identity=99.9;matches=1072;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007916
Chr1	stalkie_big_nohaplotig	exon	52136152	52136726	100	-	.	Parent=FBgn0002945.1.mrna1;Target=FBgn0002945.1 499 1073 +
Chr1	stalkie_big_nohaplotig	exon	52144965	52145410	99	-	.	Parent=FBgn0002945.1.mrna1;Target=FBgn0002945.1 53 498 +
Chr1	stalkie_big_nohaplotig	exon	52146127	52146178	100	-	.	Parent=FBgn0002945.1.mrna1;Target=FBgn0002945.1 1 52 +
Chr1	stalkie_big_nohaplotig	CDS	52136154	52136726	.	-	0	Parent=FBgn0002945.1.mrna1;Target=FBgn0002945.1 499 1071 +
Chr1	stalkie_big_nohaplotig	CDS	52144965	52145410	.	-	2	Parent=FBgn0002945.1.mrna1;Target=FBgn0002945.1 53 498 +
Chr1	stalkie_big_nohaplotig	CDS	52146127	52146178	.	-	0	Parent=FBgn0002945.1.mrna1;Target=FBgn0002945.1 1 52 +
Chr1	stalkie_big_nohaplotig	mRNA	52136152	52173947	.	-	.	ID=comp158617_c2_seq1.mrna1;geneID=comp158617_c2_seq1.path1;Name=comp158617_c2_seq1;Dir=sensecoverage=57.3;identity=99.9;matches=1044;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007916
Chr1	stalkie_big_nohaplotig	exon	52136152	52136726	100	-	.	Parent=comp158617_c2_seq1.mrna1;Target=comp158617_c2_seq1 1258 1832 +
Chr1	stalkie_big_nohaplotig	exon	52144965	52145412	99	-	.	Parent=comp158617_c2_seq1.mrna1;Target=comp158617_c2_seq1 810 1257 +
Chr1	stalkie_big_nohaplotig	exon	52153486	52153492	100	-	.	Parent=comp158617_c2_seq1.mrna1;Target=comp158617_c2_seq1 803 809 +
Chr1	stalkie_big_nohaplotig	exon	52155319	52155320	100	-	.	Parent=comp158617_c2_seq1.mrna1;Target=comp158617_c2_seq1 801 802 +
Chr1	stalkie_big_nohaplotig	exon	52162389	52162395	100	-	.	Parent=comp158617_c2_seq1.mrna1;Target=comp158617_c2_seq1 794 800 +
Chr1	stalkie_big_nohaplotig	exon	52173942	52173947	100	-	.	Parent=comp158617_c2_seq1.mrna1;Target=comp158617_c2_seq1 783 788 +
Chr1	stalkie_big_nohaplotig	CDS	52145378	52145412	.	-	1	Parent=comp158617_c2_seq1.mrna1;Target=comp158617_c2_seq1 810 844 +
Chr1	stalkie_big_nohaplotig	CDS	52153486	52153492	.	-	2	Parent=comp158617_c2_seq1.mrna1;Target=comp158617_c2_seq1 803 809 +
Chr1	stalkie_big_nohaplotig	CDS	52155319	52155320	.	-	1	Parent=comp158617_c2_seq1.mrna1;Target=comp158617_c2_seq1 801 802 +
Chr1	stalkie_big_nohaplotig	CDS	52162389	52162395	.	-	2	Parent=comp158617_c2_seq1.mrna1;Target=comp158617_c2_seq1 794 800 +
Chr1	stalkie_big_nohaplotig	CDS	52173942	52173945	.	-	0	Parent=comp158617_c2_seq1.mrna1;Target=comp158617_c2_seq1 785 788 +
Chr1	gffcl	locus	52152084	52156729	.	+	.	ID=RLOC_00007917;geneIDs=FBgn0035145.2.path1;transcripts=FBgn0035145.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52152084	52156729	.	+	.	ID=FBgn0035145.2.mrna1;geneID=FBgn0035145.2.path1;Name=FBgn0035145.2;Dir=sensecoverage=100.0;identity=99.3;matches=3838;mismatches=29;indels=0;unknowns=0;locus=RLOC_00007917
Chr1	stalkie_big_nohaplotig	exon	52152084	52152211	96	+	.	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 1 128 +
Chr1	stalkie_big_nohaplotig	exon	52152270	52152387	99	+	.	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 129 246 +
Chr1	stalkie_big_nohaplotig	exon	52152454	52152741	99	+	.	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 247 534 +
Chr1	stalkie_big_nohaplotig	exon	52152795	52152927	100	+	.	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 535 667 +
Chr1	stalkie_big_nohaplotig	exon	52152985	52153479	98	+	.	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 668 1162 +
Chr1	stalkie_big_nohaplotig	exon	52153539	52153749	100	+	.	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 1163 1373 +
Chr1	stalkie_big_nohaplotig	exon	52153804	52153963	100	+	.	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 1374 1533 +
Chr1	stalkie_big_nohaplotig	exon	52154016	52154247	100	+	.	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 1534 1765 +
Chr1	stalkie_big_nohaplotig	exon	52154316	52154557	100	+	.	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 1766 2007 +
Chr1	stalkie_big_nohaplotig	exon	52154622	52154931	100	+	.	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 2008 2317 +
Chr1	stalkie_big_nohaplotig	exon	52154993	52155297	97	+	.	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 2318 2622 +
Chr1	stalkie_big_nohaplotig	exon	52155361	52155558	100	+	.	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 2623 2820 +
Chr1	stalkie_big_nohaplotig	exon	52155618	52156397	99	+	.	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 2821 3600 +
Chr1	stalkie_big_nohaplotig	exon	52156463	52156729	99	+	.	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 3601 3867 +
Chr1	stalkie_big_nohaplotig	CDS	52152084	52152211	.	+	0	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 1 128 +
Chr1	stalkie_big_nohaplotig	CDS	52152270	52152387	.	+	1	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 129 246 +
Chr1	stalkie_big_nohaplotig	CDS	52152454	52152741	.	+	0	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 247 534 +
Chr1	stalkie_big_nohaplotig	CDS	52152795	52152927	.	+	0	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 535 667 +
Chr1	stalkie_big_nohaplotig	CDS	52152985	52153479	.	+	2	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 668 1162 +
Chr1	stalkie_big_nohaplotig	CDS	52153539	52153749	.	+	2	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 1163 1373 +
Chr1	stalkie_big_nohaplotig	CDS	52153804	52153963	.	+	1	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 1374 1533 +
Chr1	stalkie_big_nohaplotig	CDS	52154016	52154247	.	+	0	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 1534 1765 +
Chr1	stalkie_big_nohaplotig	CDS	52154316	52154557	.	+	2	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 1766 2007 +
Chr1	stalkie_big_nohaplotig	CDS	52154622	52154931	.	+	0	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 2008 2317 +
Chr1	stalkie_big_nohaplotig	CDS	52154993	52155297	.	+	2	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 2318 2622 +
Chr1	stalkie_big_nohaplotig	CDS	52155361	52155558	.	+	0	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 2623 2820 +
Chr1	stalkie_big_nohaplotig	CDS	52155618	52156397	.	+	0	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 2821 3600 +
Chr1	stalkie_big_nohaplotig	CDS	52156463	52156729	.	+	0	Parent=FBgn0035145.2.mrna1;Target=FBgn0035145.2 3601 3867 +
Chr1	gffcl	locus	52353111	52353559	.	-	.	ID=RLOC_00007919;geneIDs=comp144073_c0_seq1.path1;transcripts=comp144073_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52353111	52353559	.	-	.	ID=comp144073_c0_seq1.mrna1;geneID=comp144073_c0_seq1.path1;Name=comp144073_c0_seq1;Dir=sensecoverage=84.9;identity=99.4;matches=318;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007919
Chr1	stalkie_big_nohaplotig	exon	52353111	52353294	100	-	.	Parent=comp144073_c0_seq1.mrna1;Target=comp144073_c0_seq1 137 320 +
Chr1	stalkie_big_nohaplotig	exon	52353355	52353427	100	-	.	Parent=comp144073_c0_seq1.mrna1;Target=comp144073_c0_seq1 64 136 +
Chr1	stalkie_big_nohaplotig	exon	52353497	52353559	96	-	.	Parent=comp144073_c0_seq1.mrna1;Target=comp144073_c0_seq1 1 63 +
Chr1	stalkie_big_nohaplotig	CDS	52353200	52353294	.	-	2	Parent=comp144073_c0_seq1.mrna1;Target=comp144073_c0_seq1 137 231 +
Chr1	stalkie_big_nohaplotig	CDS	52353355	52353427	.	-	0	Parent=comp144073_c0_seq1.mrna1;Target=comp144073_c0_seq1 64 136 +
Chr1	gffcl	locus	52379455	52380488	.	-	.	ID=RLOC_00007920;geneIDs=FBgn0036849.1.path1;transcripts=FBgn0036849.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52379455	52380488	.	-	.	ID=FBgn0036849.1.mrna1;geneID=FBgn0036849.1.path1;Name=FBgn0036849.1;Dir=sensecoverage=100.0;identity=98.8;matches=842;mismatches=10;indels=0;unknowns=0;locus=RLOC_00007920
Chr1	stalkie_big_nohaplotig	exon	52379455	52379602	97	-	.	Parent=FBgn0036849.1.mrna1;Target=FBgn0036849.1 705 852 +
Chr1	stalkie_big_nohaplotig	exon	52379663	52379770	97	-	.	Parent=FBgn0036849.1.mrna1;Target=FBgn0036849.1 597 704 +
Chr1	stalkie_big_nohaplotig	exon	52379829	52380082	99	-	.	Parent=FBgn0036849.1.mrna1;Target=FBgn0036849.1 343 596 +
Chr1	stalkie_big_nohaplotig	exon	52380147	52380488	99	-	.	Parent=FBgn0036849.1.mrna1;Target=FBgn0036849.1 1 342 +
Chr1	stalkie_big_nohaplotig	CDS	52379455	52379602	.	-	1	Parent=FBgn0036849.1.mrna1;Target=FBgn0036849.1 705 852 +
Chr1	stalkie_big_nohaplotig	CDS	52379663	52379770	.	-	1	Parent=FBgn0036849.1.mrna1;Target=FBgn0036849.1 597 704 +
Chr1	stalkie_big_nohaplotig	CDS	52379829	52380082	.	-	0	Parent=FBgn0036849.1.mrna1;Target=FBgn0036849.1 343 596 +
Chr1	stalkie_big_nohaplotig	CDS	52380147	52380488	.	-	0	Parent=FBgn0036849.1.mrna1;Target=FBgn0036849.1 1 342 +
Chr1	gffcl	locus	52385189	52385751	.	-	.	ID=RLOC_00007921;geneIDs=comp149180_c0_seq1.path1;transcripts=comp149180_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52385189	52385751	.	-	.	ID=comp149180_c0_seq1.mrna1;geneID=comp149180_c0_seq1.path1;Name=comp149180_c0_seq1;Dir=antisensecoverage=99.0;identity=98.8;matches=496;mismatches=4;indels=2;unknowns=0;locus=RLOC_00007921
Chr1	stalkie_big_nohaplotig	exon	52385189	52385559	98	-	.	Parent=comp149180_c0_seq1.mrna1;Target=comp149180_c0_seq1 1 369 -
Chr1	stalkie_big_nohaplotig	exon	52385621	52385751	100	-	.	Parent=comp149180_c0_seq1.mrna1;Target=comp149180_c0_seq1 370 500 -
Chr1	stalkie_big_nohaplotig	CDS	52385351	52385559	.	-	2	Parent=comp149180_c0_seq1.mrna1;Target=comp149180_c0_seq1 161 369 .
Chr1	stalkie_big_nohaplotig	CDS	52385621	52385654	.	-	0	Parent=comp149180_c0_seq1.mrna1;Target=comp149180_c0_seq1 370 403 .
Chr1	gffcl	locus	52389828	52391013	.	-	.	ID=RLOC_00007922;geneIDs=comp155094_c0_seq1.path1;transcripts=comp155094_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52389828	52391013	.	-	.	ID=comp155094_c0_seq1.mrna1;geneID=comp155094_c0_seq1.path1;Name=comp155094_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.8;matches=1173;mismatches=9;indels=5;unknowns=0;Target=comp155094_c0_seq1 1187 5 .;CDS_Target=comp155094_c0_seq1 1123 1031 .;locus=RLOC_00007922
Chr1	stalkie_big_nohaplotig	exon	52389828	52391013	98	-	.	Parent=comp155094_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52389892	52389984	.	-	0	Parent=comp155094_c0_seq1.mrna1
Chr1	gffcl	locus	52391870	52392351	.	+	.	ID=RLOC_00007923;geneIDs=comp127545_c0_seq1.path1;transcripts=comp127545_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52391870	52392351	.	+	.	ID=comp127545_c0_seq1.mrna1;geneID=comp127545_c0_seq1.path1;Name=comp127545_c0_seq1;Dir=sensecoverage=98.6;identity=99.8;matches=409;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007923
Chr1	stalkie_big_nohaplotig	exon	52391870	52392018	99	+	.	Parent=comp127545_c0_seq1.mrna1;Target=comp127545_c0_seq1 1 149 +
Chr1	stalkie_big_nohaplotig	exon	52392091	52392351	100	+	.	Parent=comp127545_c0_seq1.mrna1;Target=comp127545_c0_seq1 150 410 +
Chr1	stalkie_big_nohaplotig	CDS	52391991	52392018	.	+	0	Parent=comp127545_c0_seq1.mrna1;Target=comp127545_c0_seq1 122 149 +
Chr1	stalkie_big_nohaplotig	CDS	52392091	52392248	.	+	2	Parent=comp127545_c0_seq1.mrna1;Target=comp127545_c0_seq1 150 307 +
Chr1	gffcl	locus	52395087	52396448	.	-	.	ID=RLOC_00007924;geneIDs=FBgn0036846.1.path1;transcripts=FBgn0036846.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52395087	52396448	.	-	.	ID=FBgn0036846.1.mrna1;geneID=FBgn0036846.1.path1;Name=FBgn0036846.1;Dir=sensecoverage=100.0;identity=99.9;matches=1298;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007924
Chr1	stalkie_big_nohaplotig	exon	52395087	52395955	99	-	.	Parent=FBgn0036846.1.mrna1;Target=FBgn0036846.1 431 1299 +
Chr1	stalkie_big_nohaplotig	exon	52396019	52396448	100	-	.	Parent=FBgn0036846.1.mrna1;Target=FBgn0036846.1 1 430 +
Chr1	stalkie_big_nohaplotig	CDS	52395087	52395955	.	-	2	Parent=FBgn0036846.1.mrna1;Target=FBgn0036846.1 431 1299 +
Chr1	stalkie_big_nohaplotig	CDS	52396019	52396448	.	-	0	Parent=FBgn0036846.1.mrna1;Target=FBgn0036846.1 1 430 +
Chr1	gffcl	locus	52409203	52410087	.	+	.	ID=RLOC_00007925;geneIDs=Dv_FBgn0206941.2.path4;transcripts=Dv_FBgn0206941.2.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	52409203	52410087	.	+	.	ID=Dv_FBgn0206941.2.mrna4;geneID=Dv_FBgn0206941.2.path4;Name=Dv_FBgn0206941.2;Dir=indeterminatecoverage=100.0;identity=99.8;matches=883;mismatches=2;indels=0;unknowns=0;Target=Dv_FBgn0206941.2 885 1 .;locus=RLOC_00007925
Chr1	stalkie_big_nohaplotig	exon	52409203	52410087	99	+	.	Parent=Dv_FBgn0206941.2.mrna4
Chr1	stalkie_big_nohaplotig	CDS	52409203	52410087	.	+	0	Parent=Dv_FBgn0206941.2.mrna4
Chr1	gffcl	locus	52447671	52508068	.	+	.	ID=RLOC_00007926;geneIDs=FBgn0036844.1.path1,comp152209_c0_seq1.path1;transcripts=comp152209_c0_seq1.mrna1,FBgn0036844.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52447671	52463529	.	+	.	ID=comp152209_c0_seq1.mrna1;geneID=comp152209_c0_seq1.path1;Name=comp152209_c0_seq1;Dir=indeterminatecoverage=87.0;identity=99.5;matches=1108;mismatches=4;indels=2;unknowns=0;Target=comp152209_c0_seq1 358 218 .;locus=RLOC_00007926
Chr1	stalkie_big_nohaplotig	exon	52447671	52448758	99	+	.	Parent=comp152209_c0_seq1.mrna1;Target=comp152209_c0_seq1 1112 23 .
Chr1	stalkie_big_nohaplotig	exon	52458703	52458710	100	+	.	Parent=comp152209_c0_seq1.mrna1;Target=comp152209_c0_seq1 1166 1159 .
Chr1	stalkie_big_nohaplotig	exon	52463516	52463529	100	+	.	Parent=comp152209_c0_seq1.mrna1;Target=comp152209_c0_seq1 1213 1200 .
Chr1	stalkie_big_nohaplotig	CDS	52447866	52448006	.	+	0	Parent=comp152209_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52448759	52508068	.	+	.	ID=FBgn0036844.1.mrna1;geneID=FBgn0036844.1.path1;Name=FBgn0036844.1;Dir=sensecoverage=100.0;identity=100.0;matches=1452;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007926
Chr1	stalkie_big_nohaplotig	exon	52448759	52449305	100	+	.	Parent=FBgn0036844.1.mrna1;Target=FBgn0036844.1 1 547 +
Chr1	stalkie_big_nohaplotig	exon	52505422	52505545	100	+	.	Parent=FBgn0036844.1.mrna1;Target=FBgn0036844.1 548 671 +
Chr1	stalkie_big_nohaplotig	exon	52505606	52505789	100	+	.	Parent=FBgn0036844.1.mrna1;Target=FBgn0036844.1 672 855 +
Chr1	stalkie_big_nohaplotig	exon	52505855	52505990	100	+	.	Parent=FBgn0036844.1.mrna1;Target=FBgn0036844.1 856 991 +
Chr1	stalkie_big_nohaplotig	exon	52507608	52508068	100	+	.	Parent=FBgn0036844.1.mrna1;Target=FBgn0036844.1 992 1452 +
Chr1	stalkie_big_nohaplotig	CDS	52448759	52449305	.	+	0	Parent=FBgn0036844.1.mrna1;Target=FBgn0036844.1 1 547 +
Chr1	stalkie_big_nohaplotig	CDS	52505422	52505545	.	+	2	Parent=FBgn0036844.1.mrna1;Target=FBgn0036844.1 548 671 +
Chr1	stalkie_big_nohaplotig	CDS	52505606	52505789	.	+	1	Parent=FBgn0036844.1.mrna1;Target=FBgn0036844.1 672 855 +
Chr1	stalkie_big_nohaplotig	CDS	52505855	52505990	.	+	0	Parent=FBgn0036844.1.mrna1;Target=FBgn0036844.1 856 991 +
Chr1	stalkie_big_nohaplotig	CDS	52507608	52508068	.	+	2	Parent=FBgn0036844.1.mrna1;Target=FBgn0036844.1 992 1452 +
Chr1	gffcl	locus	52512181	52512586	.	-	.	ID=RLOC_00007927;geneIDs=comp140684_c0_seq1.path1;transcripts=comp140684_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52512181	52512586	.	-	.	ID=comp140684_c0_seq1.mrna1;geneID=comp140684_c0_seq1.path1;Name=comp140684_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=402;mismatches=4;indels=0;unknowns=0;Target=comp140684_c0_seq1 406 1 .;CDS_Target=comp140684_c0_seq1 165 100 .;locus=RLOC_00007927
Chr1	stalkie_big_nohaplotig	exon	52512181	52512586	99	-	.	Parent=comp140684_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52512422	52512487	.	-	0	Parent=comp140684_c0_seq1.mrna1
Chr1	gffcl	locus	52513207	52513652	.	+	.	ID=RLOC_00007928;geneIDs=comp120015_c0_seq1.path1;transcripts=comp120015_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52513207	52513652	.	+	.	ID=comp120015_c0_seq1.mrna1;geneID=comp120015_c0_seq1.path1;Name=comp120015_c0_seq1;Dir=indeterminatecoverage=95.9;identity=100.0;matches=446;mismatches=0;indels=0;unknowns=0;Target=comp120015_c0_seq1 446 1 .;CDS_Target=comp120015_c0_seq1 345 241 .;locus=RLOC_00007928
Chr1	stalkie_big_nohaplotig	exon	52513207	52513652	100	+	.	Parent=comp120015_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52513447	52513551	.	+	0	Parent=comp120015_c0_seq1.mrna1
Chr1	gffcl	locus	52513886	52514229	.	-	.	ID=RLOC_00007929;geneIDs=comp118686_c0_seq1.path1;transcripts=comp118686_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52513886	52514229	.	-	.	ID=comp118686_c0_seq1.mrna1;geneID=comp118686_c0_seq1.path1;Name=comp118686_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.7;matches=343;mismatches=1;indels=0;unknowns=0;Target=comp118686_c0_seq1 344 1 .;CDS_Target=comp118686_c0_seq1 237 1 .;locus=RLOC_00007929
Chr1	stalkie_big_nohaplotig	exon	52513886	52514229	99	-	.	Parent=comp118686_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52513993	52514229	.	-	0	Parent=comp118686_c0_seq1.mrna1
Chr1	gffcl	locus	52518443	52520758	.	-	.	ID=RLOC_00007930;geneIDs=FBgn0036843.1.path1;transcripts=FBgn0036843.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52518443	52520758	.	-	.	ID=FBgn0036843.1.mrna1;geneID=FBgn0036843.1.path1;Name=FBgn0036843.1;Dir=sensecoverage=100.0;identity=100.0;matches=984;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007930
Chr1	stalkie_big_nohaplotig	exon	52518443	52518551	100	-	.	Parent=FBgn0036843.1.mrna1;Target=FBgn0036843.1 876 984 +
Chr1	stalkie_big_nohaplotig	exon	52518614	52518661	100	-	.	Parent=FBgn0036843.1.mrna1;Target=FBgn0036843.1 828 875 +
Chr1	stalkie_big_nohaplotig	exon	52518726	52519018	100	-	.	Parent=FBgn0036843.1.mrna1;Target=FBgn0036843.1 535 827 +
Chr1	stalkie_big_nohaplotig	exon	52519877	52520122	100	-	.	Parent=FBgn0036843.1.mrna1;Target=FBgn0036843.1 289 534 +
Chr1	stalkie_big_nohaplotig	exon	52520409	52520677	100	-	.	Parent=FBgn0036843.1.mrna1;Target=FBgn0036843.1 20 288 +
Chr1	stalkie_big_nohaplotig	exon	52520740	52520758	100	-	.	Parent=FBgn0036843.1.mrna1;Target=FBgn0036843.1 1 19 +
Chr1	stalkie_big_nohaplotig	CDS	52518443	52518551	.	-	1	Parent=FBgn0036843.1.mrna1;Target=FBgn0036843.1 876 984 +
Chr1	stalkie_big_nohaplotig	CDS	52518614	52518661	.	-	1	Parent=FBgn0036843.1.mrna1;Target=FBgn0036843.1 828 875 +
Chr1	stalkie_big_nohaplotig	CDS	52518726	52519018	.	-	0	Parent=FBgn0036843.1.mrna1;Target=FBgn0036843.1 535 827 +
Chr1	stalkie_big_nohaplotig	CDS	52519877	52520122	.	-	0	Parent=FBgn0036843.1.mrna1;Target=FBgn0036843.1 289 534 +
Chr1	stalkie_big_nohaplotig	CDS	52520409	52520677	.	-	2	Parent=FBgn0036843.1.mrna1;Target=FBgn0036843.1 20 288 +
Chr1	stalkie_big_nohaplotig	CDS	52520740	52520758	.	-	0	Parent=FBgn0036843.1.mrna1;Target=FBgn0036843.1 1 19 +
Chr1	gffcl	locus	52545411	52546770	.	-	.	ID=RLOC_00007931;geneIDs=comp155659_c0_seq1.path1;transcripts=comp155659_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52545411	52546770	.	-	.	ID=comp155659_c0_seq1.mrna1;geneID=comp155659_c0_seq1.path1;Name=comp155659_c0_seq1;Dir=sensecoverage=99.7;identity=98.1;matches=788;mismatches=3;indels=12;unknowns=0;locus=RLOC_00007931
Chr1	stalkie_big_nohaplotig	exon	52545411	52546085	99	-	.	Parent=comp155659_c0_seq1.mrna1;Target=comp155659_c0_seq1 124 798 +
Chr1	stalkie_big_nohaplotig	exon	52546171	52546189	100	-	.	Parent=comp155659_c0_seq1.mrna1;Target=comp155659_c0_seq1 105 123 +
Chr1	stalkie_big_nohaplotig	exon	52546548	52546583	100	-	.	Parent=comp155659_c0_seq1.mrna1;Target=comp155659_c0_seq1 69 104 +
Chr1	stalkie_big_nohaplotig	exon	52546704	52546770	82	-	.	Parent=comp155659_c0_seq1.mrna1;Target=comp155659_c0_seq1 2 68 +
Chr1	stalkie_big_nohaplotig	CDS	52545511	52546085	.	-	2	Parent=comp155659_c0_seq1.mrna1;Target=comp155659_c0_seq1 124 698 +
Chr1	stalkie_big_nohaplotig	CDS	52546171	52546189	.	-	0	Parent=comp155659_c0_seq1.mrna1;Target=comp155659_c0_seq1 105 123 +
Chr1	stalkie_big_nohaplotig	CDS	52546548	52546583	.	-	0	Parent=comp155659_c0_seq1.mrna1;Target=comp155659_c0_seq1 69 104 +
Chr1	stalkie_big_nohaplotig	CDS	52546704	52546706	.	-	0	Parent=comp155659_c0_seq1.mrna1;Target=comp155659_c0_seq1 66 68 +
Chr1	gffcl	locus	52551919	52553278	.	+	.	ID=RLOC_00007932;geneIDs=comp155659_c0_seq1.path2;transcripts=comp155659_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	52551919	52553278	.	+	.	ID=comp155659_c0_seq1.mrna2;geneID=comp155659_c0_seq1.path2;Name=comp155659_c0_seq1;Dir=sensecoverage=99.7;identity=98.0;matches=787;mismatches=4;indels=12;unknowns=0;locus=RLOC_00007932
Chr1	stalkie_big_nohaplotig	exon	52551919	52551985	82	+	.	Parent=comp155659_c0_seq1.mrna2;Target=comp155659_c0_seq1 2 68 +
Chr1	stalkie_big_nohaplotig	exon	52552106	52552141	100	+	.	Parent=comp155659_c0_seq1.mrna2;Target=comp155659_c0_seq1 69 104 +
Chr1	stalkie_big_nohaplotig	exon	52552500	52552518	100	+	.	Parent=comp155659_c0_seq1.mrna2;Target=comp155659_c0_seq1 105 123 +
Chr1	stalkie_big_nohaplotig	exon	52552604	52553278	99	+	.	Parent=comp155659_c0_seq1.mrna2;Target=comp155659_c0_seq1 124 798 +
Chr1	stalkie_big_nohaplotig	CDS	52551983	52551985	.	+	0	Parent=comp155659_c0_seq1.mrna2;Target=comp155659_c0_seq1 66 68 +
Chr1	stalkie_big_nohaplotig	CDS	52552106	52552141	.	+	0	Parent=comp155659_c0_seq1.mrna2;Target=comp155659_c0_seq1 69 104 +
Chr1	stalkie_big_nohaplotig	CDS	52552500	52552518	.	+	0	Parent=comp155659_c0_seq1.mrna2;Target=comp155659_c0_seq1 105 123 +
Chr1	stalkie_big_nohaplotig	CDS	52552604	52553178	.	+	2	Parent=comp155659_c0_seq1.mrna2;Target=comp155659_c0_seq1 124 698 +
Chr1	gffcl	locus	52556738	52655427	.	+	.	ID=RLOC_00007933;geneIDs=comp163708_c0_seq1.path1;transcripts=comp163708_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52556738	52655427	.	+	.	ID=comp163708_c0_seq1.mrna1;geneID=comp163708_c0_seq1.path1;Name=comp163708_c0_seq1;Dir=antisensecoverage=100.0;identity=93.8;matches=2432;mismatches=113;indels=49;unknowns=0;Target=comp163708_c0_seq1 83 265 .;locus=RLOC_00007933
Chr1	stalkie_big_nohaplotig	exon	52556738	52556840	100	+	.	Parent=comp163708_c0_seq1.mrna1;Target=comp163708_c0_seq1 2536 2638 -
Chr1	stalkie_big_nohaplotig	exon	52556901	52557042	98	+	.	Parent=comp163708_c0_seq1.mrna1;Target=comp163708_c0_seq1 2394 2535 -
Chr1	stalkie_big_nohaplotig	exon	52557115	52557434	97	+	.	Parent=comp163708_c0_seq1.mrna1;Target=comp163708_c0_seq1 2074 2393 -
Chr1	stalkie_big_nohaplotig	exon	52557521	52558083	98	+	.	Parent=comp163708_c0_seq1.mrna1;Target=comp163708_c0_seq1 1511 2073 -
Chr1	stalkie_big_nohaplotig	exon	52558139	52558307	97	+	.	Parent=comp163708_c0_seq1.mrna1;Target=comp163708_c0_seq1 1341 1510 -
Chr1	stalkie_big_nohaplotig	exon	52626030	52626355	97	+	.	Parent=comp163708_c0_seq1.mrna1;Target=comp163708_c0_seq1 1015 1340 -
Chr1	stalkie_big_nohaplotig	exon	52654423	52655023	94	+	.	Parent=comp163708_c0_seq1.mrna1;Target=comp163708_c0_seq1 412 1014 -
Chr1	stalkie_big_nohaplotig	exon	52655103	52655427	74	+	.	Parent=comp163708_c0_seq1.mrna1;Target=comp163708_c0_seq1 1 363 -
Chr1	stalkie_big_nohaplotig	CDS	52655171	52655346	.	+	0	Parent=comp163708_c0_seq1.mrna1
Chr1	gffcl	locus	52568037	52570994	.	-	.	ID=RLOC_00007934;geneIDs=comp156466_c0_seq1.path1;transcripts=comp156466_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52568037	52570994	.	-	.	ID=comp156466_c0_seq1.mrna1;geneID=comp156466_c0_seq1.path1;Name=comp156466_c0_seq1;Dir=sensecoverage=98.8;identity=99.8;matches=870;mismatches=2;indels=0;unknowns=0;locus=RLOC_00007934
Chr1	stalkie_big_nohaplotig	exon	52568037	52568412	99	-	.	Parent=comp156466_c0_seq1.mrna1;Target=comp156466_c0_seq1 506 881 +
Chr1	stalkie_big_nohaplotig	exon	52570428	52570583	100	-	.	Parent=comp156466_c0_seq1.mrna1;Target=comp156466_c0_seq1 350 505 +
Chr1	stalkie_big_nohaplotig	exon	52570655	52570994	100	-	.	Parent=comp156466_c0_seq1.mrna1;Target=comp156466_c0_seq1 10 349 +
Chr1	stalkie_big_nohaplotig	CDS	52568212	52568412	.	-	0	Parent=comp156466_c0_seq1.mrna1;Target=comp156466_c0_seq1 506 706 +
Chr1	stalkie_big_nohaplotig	CDS	52570428	52570583	.	-	0	Parent=comp156466_c0_seq1.mrna1;Target=comp156466_c0_seq1 350 505 +
Chr1	stalkie_big_nohaplotig	CDS	52570655	52570840	.	-	0	Parent=comp156466_c0_seq1.mrna1;Target=comp156466_c0_seq1 164 349 +
Chr1	gffcl	locus	52590185	52590455	.	-	.	ID=RLOC_00007935;geneIDs=comp144490_c0_seq1.path1;transcripts=comp144490_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52590185	52590455	.	-	.	ID=comp144490_c0_seq1.mrna1;geneID=comp144490_c0_seq1.path1;Name=comp144490_c0_seq1;Dir=indeterminatecoverage=99.3;identity=100.0;matches=271;mismatches=0;indels=0;unknowns=0;Target=comp144490_c0_seq1 271 1 .;CDS_Target=comp144490_c0_seq1 48 1 .;locus=RLOC_00007935
Chr1	stalkie_big_nohaplotig	exon	52590185	52590455	100	-	.	Parent=comp144490_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52590408	52590455	.	-	0	Parent=comp144490_c0_seq1.mrna1
Chr1	gffcl	locus	52590792	52591591	.	+	.	ID=RLOC_00007936;geneIDs=comp157148_c0_seq1.path1;transcripts=comp157148_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52590792	52591591	.	+	.	ID=comp157148_c0_seq1.mrna1;geneID=comp157148_c0_seq1.path1;Name=comp157148_c0_seq1;Dir=indeterminatecoverage=98.7;identity=95.5;matches=793;mismatches=7;indels=30;unknowns=0;Target=comp157148_c0_seq1 841 12 .;CDS_Target=comp157148_c0_seq1 290 162 .;locus=RLOC_00007936
Chr1	stalkie_big_nohaplotig	exon	52590792	52591591	95	+	.	Parent=comp157148_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52590912	52591040	.	+	0	Parent=comp157148_c0_seq1.mrna1
Chr1	gffcl	locus	52591747	52592516	.	-	.	ID=RLOC_00007937;geneIDs=comp157783_c0_seq1.path1;transcripts=comp157783_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52591747	52592516	.	-	.	ID=comp157783_c0_seq1.mrna1;geneID=comp157783_c0_seq1.path1;Name=comp157783_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.3;matches=761;mismatches=9;indels=20;unknowns=0;Target=comp157783_c0_seq1 790 1 .;CDS_Target=comp157783_c0_seq1 145 29 .;locus=RLOC_00007937
Chr1	stalkie_big_nohaplotig	exon	52591747	52592516	96	-	.	Parent=comp157783_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52592372	52592488	.	-	0	Parent=comp157783_c0_seq1.mrna1
Chr1	gffcl	locus	52593341	52594085	.	-	.	ID=RLOC_00007938;geneIDs=comp145295_c0_seq1.path1;transcripts=comp145295_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52593341	52594085	.	-	.	ID=comp145295_c0_seq1.mrna1;geneID=comp145295_c0_seq1.path1;Name=comp145295_c0_seq1;Dir=indeterminatecoverage=90.5;identity=98.9;matches=742;mismatches=3;indels=5;unknowns=0;Target=comp145295_c0_seq1 750 1 .;CDS_Target=comp145295_c0_seq1 575 234 .;locus=RLOC_00007938
Chr1	stalkie_big_nohaplotig	exon	52593341	52594085	98	-	.	Parent=comp145295_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52593516	52593857	.	-	0	Parent=comp145295_c0_seq1.mrna1
Chr1	gffcl	locus	52597735	52599017	.	+	.	ID=RLOC_00007939;geneIDs=comp162420_c0_seq1.path1;transcripts=comp162420_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52597735	52599017	.	+	.	ID=comp162420_c0_seq1.mrna1;geneID=comp162420_c0_seq1.path1;Name=comp162420_c0_seq1;Dir=indeterminatecoverage=98.2;identity=99.9;matches=1282;mismatches=1;indels=0;unknowns=0;Target=comp162420_c0_seq1 1307 25 .;CDS_Target=comp162420_c0_seq1 391 47 .;locus=RLOC_00007939
Chr1	stalkie_big_nohaplotig	exon	52597735	52599017	99	+	.	Parent=comp162420_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52597757	52598101	.	+	0	Parent=comp162420_c0_seq1.mrna1
Chr1	gffcl	locus	52602061	52603902	.	-	.	ID=RLOC_00007940;geneIDs=Dv_FBgn0200733.path1;transcripts=Dv_FBgn0200733.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52602061	52603902	.	-	.	ID=Dv_FBgn0200733.mrna1;geneID=Dv_FBgn0200733.path1;Name=Dv_FBgn0200733;Dir=sensecoverage=100.0;identity=99.0;matches=478;mismatches=3;indels=2;unknowns=0;Target=Dv_FBgn0200733 122 151 +;locus=RLOC_00007940
Chr1	stalkie_big_nohaplotig	exon	52602061	52602147	100	-	.	Parent=Dv_FBgn0200733.mrna1;Target=Dv_FBgn0200733 397 483 +
Chr1	stalkie_big_nohaplotig	exon	52602393	52602625	100	-	.	Parent=Dv_FBgn0200733.mrna1;Target=Dv_FBgn0200733 164 396 +
Chr1	stalkie_big_nohaplotig	exon	52603742	52603902	96	-	.	Parent=Dv_FBgn0200733.mrna1;Target=Dv_FBgn0200733 1 163 +
Chr1	stalkie_big_nohaplotig	CDS	52603754	52603781	.	-	0	Parent=Dv_FBgn0200733.mrna1
Chr1	gffcl	locus	52606109	52606405	.	+	.	ID=RLOC_00007941;geneIDs=comp147826_c0_seq1.path1;transcripts=comp147826_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52606109	52606405	.	+	.	ID=comp147826_c0_seq1.mrna1;geneID=comp147826_c0_seq1.path1;Name=comp147826_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=297;mismatches=0;indels=0;unknowns=0;Target=comp147826_c0_seq1 297 1 .;CDS_Target=comp147826_c0_seq1 255 124 .;locus=RLOC_00007941
Chr1	stalkie_big_nohaplotig	exon	52606109	52606405	100	+	.	Parent=comp147826_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52606232	52606363	.	+	0	Parent=comp147826_c0_seq1.mrna1
Chr1	gffcl	locus	52712795	52719692	.	-	.	ID=RLOC_00007942;geneIDs=FBgn0026015.3.path1;transcripts=FBgn0026015.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52712795	52719692	.	-	.	ID=FBgn0026015.3.mrna1;geneID=FBgn0026015.3.path1;Name=FBgn0026015.3;Dir=sensecoverage=83.4;identity=98.7;matches=1754;mismatches=18;indels=6;unknowns=0;locus=RLOC_00007942
Chr1	stalkie_big_nohaplotig	exon	52712795	52712813	63	-	.	Parent=FBgn0026015.3.mrna1;Target=FBgn0026015.3 1870 1882 +
Chr1	stalkie_big_nohaplotig	exon	52717656	52717847	98	-	.	Parent=FBgn0026015.3.mrna1;Target=FBgn0026015.3 1678 1869 +
Chr1	stalkie_big_nohaplotig	exon	52718009	52718633	99	-	.	Parent=FBgn0026015.3.mrna1;Target=FBgn0026015.3 1053 1677 +
Chr1	stalkie_big_nohaplotig	exon	52718690	52718890	99	-	.	Parent=FBgn0026015.3.mrna1;Target=FBgn0026015.3 852 1052 +
Chr1	stalkie_big_nohaplotig	exon	52718952	52719692	98	-	.	Parent=FBgn0026015.3.mrna1;Target=FBgn0026015.3 111 851 +
Chr1	stalkie_big_nohaplotig	CDS	52712796	52712813	.	-	0	Parent=FBgn0026015.3.mrna1;Target=FBgn0026015.3 1870 1881 +
Chr1	stalkie_big_nohaplotig	CDS	52717656	52717847	.	-	0	Parent=FBgn0026015.3.mrna1;Target=FBgn0026015.3 1678 1869 +
Chr1	stalkie_big_nohaplotig	CDS	52718009	52718633	.	-	1	Parent=FBgn0026015.3.mrna1;Target=FBgn0026015.3 1053 1677 +
Chr1	stalkie_big_nohaplotig	CDS	52718690	52718890	.	-	1	Parent=FBgn0026015.3.mrna1;Target=FBgn0026015.3 852 1052 +
Chr1	stalkie_big_nohaplotig	CDS	52718952	52719691	.	-	0	Parent=FBgn0026015.3.mrna1;Target=FBgn0026015.3 112 851 +
Chr1	gffcl	locus	52760535	52773223	.	+	.	ID=RLOC_00007943;geneIDs=FBgn0260653.1.path1;transcripts=FBgn0260653.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52760535	52773223	.	+	.	ID=FBgn0260653.1.mrna1;geneID=FBgn0260653.1.path1;Name=FBgn0260653.1;Dir=sensecoverage=96.2;identity=99.9;matches=1555;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007943
Chr1	stalkie_big_nohaplotig	exon	52760535	52760695	100	+	.	Parent=FBgn0260653.1.mrna1;Target=FBgn0260653.1 62 222 +
Chr1	stalkie_big_nohaplotig	exon	52762616	52762865	100	+	.	Parent=FBgn0260653.1.mrna1;Target=FBgn0260653.1 223 472 +
Chr1	stalkie_big_nohaplotig	exon	52771943	52772261	100	+	.	Parent=FBgn0260653.1.mrna1;Target=FBgn0260653.1 473 791 +
Chr1	stalkie_big_nohaplotig	exon	52772398	52773223	99	+	.	Parent=FBgn0260653.1.mrna1;Target=FBgn0260653.1 792 1617 +
Chr1	stalkie_big_nohaplotig	CDS	52760537	52760695	.	+	0	Parent=FBgn0260653.1.mrna1;Target=FBgn0260653.1 64 222 +
Chr1	stalkie_big_nohaplotig	CDS	52762616	52762865	.	+	0	Parent=FBgn0260653.1.mrna1;Target=FBgn0260653.1 223 472 +
Chr1	stalkie_big_nohaplotig	CDS	52771943	52772261	.	+	2	Parent=FBgn0260653.1.mrna1;Target=FBgn0260653.1 473 791 +
Chr1	stalkie_big_nohaplotig	CDS	52772398	52773223	.	+	1	Parent=FBgn0260653.1.mrna1;Target=FBgn0260653.1 792 1617 +
Chr1	gffcl	locus	52817452	52826327	.	.	.	ID=RLOC_00007944;geneIDs=FBgn0261341.1.path1,comp148224_c0_seq1.path1,comp350048_c1_seq1.path1,comp803251_c0_seq1.path1;transcripts=comp350048_c1_seq1.mrna1,FBgn0261341.1.mrna1,comp803251_c0_seq1.mrna1,comp148224_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52817452	52824211	.	+	.	ID=comp350048_c1_seq1.mrna1;geneID=comp350048_c1_seq1.path1;Name=comp350048_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=209;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007944
Chr1	stalkie_big_nohaplotig	exon	52817452	52817478	88	+	.	Parent=comp350048_c1_seq1.mrna1;Target=comp350048_c1_seq1 27 1 .
Chr1	stalkie_big_nohaplotig	exon	52824027	52824211	100	+	.	Parent=comp350048_c1_seq1.mrna1;Target=comp350048_c1_seq1 212 28 .
Chr1	stalkie_big_nohaplotig	CDS	52817454	52817478	.	+	0	Parent=comp350048_c1_seq1.mrna1;Target=comp350048_c1_seq1 27 3 .
Chr1	stalkie_big_nohaplotig	CDS	52824027	52824076	.	+	2	Parent=comp350048_c1_seq1.mrna1;Target=comp350048_c1_seq1 77 28 .
Chr1	stalkie_big_nohaplotig	mRNA	52817885	52826327	.	+	.	ID=FBgn0261341.1.mrna1;geneID=FBgn0261341.1.path1;Name=FBgn0261341.1;Dir=sensecoverage=100.0;identity=99.9;matches=1607;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007944
Chr1	stalkie_big_nohaplotig	exon	52817885	52817960	100	+	.	Parent=FBgn0261341.1.mrna1;Target=FBgn0261341.1 1 76 +
Chr1	stalkie_big_nohaplotig	exon	52822959	52823079	100	+	.	Parent=FBgn0261341.1.mrna1;Target=FBgn0261341.1 77 197 +
Chr1	stalkie_big_nohaplotig	exon	52824190	52824302	100	+	.	Parent=FBgn0261341.1.mrna1;Target=FBgn0261341.1 198 310 +
Chr1	stalkie_big_nohaplotig	exon	52824959	52825108	100	+	.	Parent=FBgn0261341.1.mrna1;Target=FBgn0261341.1 311 460 +
Chr1	stalkie_big_nohaplotig	exon	52825180	52826327	99	+	.	Parent=FBgn0261341.1.mrna1;Target=FBgn0261341.1 461 1608 +
Chr1	stalkie_big_nohaplotig	CDS	52817885	52817960	.	+	0	Parent=FBgn0261341.1.mrna1;Target=FBgn0261341.1 1 76 +
Chr1	stalkie_big_nohaplotig	CDS	52822959	52823079	.	+	2	Parent=FBgn0261341.1.mrna1;Target=FBgn0261341.1 77 197 +
Chr1	stalkie_big_nohaplotig	CDS	52824190	52824302	.	+	1	Parent=FBgn0261341.1.mrna1;Target=FBgn0261341.1 198 310 +
Chr1	stalkie_big_nohaplotig	CDS	52824959	52825108	.	+	2	Parent=FBgn0261341.1.mrna1;Target=FBgn0261341.1 311 460 +
Chr1	stalkie_big_nohaplotig	CDS	52825180	52826327	.	+	2	Parent=FBgn0261341.1.mrna1;Target=FBgn0261341.1 461 1608 +
Chr1	stalkie_big_nohaplotig	mRNA	52823494	52824042	.	-	.	ID=comp803251_c0_seq1.mrna1;geneID=comp803251_c0_seq1.path1;Name=comp803251_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=547;mismatches=0;indels=2;unknowns=0;Target=comp803251_c0_seq1 547 1 .;CDS_Target=comp803251_c0_seq1 99 1 .;locus=RLOC_00007944
Chr1	stalkie_big_nohaplotig	exon	52823494	52824042	99	-	.	Parent=comp803251_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52823944	52824042	.	-	0	Parent=comp803251_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52824279	52824982	.	-	.	ID=comp148224_c0_seq1.mrna1;geneID=comp148224_c0_seq1.path1;Name=comp148224_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=698;mismatches=6;indels=0;unknowns=0;Target=comp148224_c0_seq1 704 1 .;CDS_Target=comp148224_c0_seq1 279 211 .;locus=RLOC_00007944
Chr1	stalkie_big_nohaplotig	exon	52824279	52824982	99	-	.	Parent=comp148224_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52824704	52824772	.	-	0	Parent=comp148224_c0_seq1.mrna1
Chr1	gffcl	locus	52829855	52830526	.	+	.	ID=RLOC_00007945;geneIDs=FBgn0034791.1.path1;transcripts=FBgn0034791.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52829855	52830526	.	+	.	ID=FBgn0034791.1.mrna1;geneID=FBgn0034791.1.path1;Name=FBgn0034791.1;Dir=sensecoverage=100.0;identity=99.8;matches=611;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007945
Chr1	stalkie_big_nohaplotig	exon	52829855	52830061	99	+	.	Parent=FBgn0034791.1.mrna1;Target=FBgn0034791.1 1 207 +
Chr1	stalkie_big_nohaplotig	exon	52830122	52830526	100	+	.	Parent=FBgn0034791.1.mrna1;Target=FBgn0034791.1 208 612 +
Chr1	stalkie_big_nohaplotig	CDS	52829855	52830061	.	+	0	Parent=FBgn0034791.1.mrna1;Target=FBgn0034791.1 1 207 +
Chr1	stalkie_big_nohaplotig	CDS	52830122	52830526	.	+	0	Parent=FBgn0034791.1.mrna1;Target=FBgn0034791.1 208 612 +
Chr1	gffcl	locus	52830869	52833624	.	.	.	ID=RLOC_00007946;geneIDs=FBgn0004623.1.path1,comp146118_c0_seq1.path1;transcripts=FBgn0004623.1.mrna1,comp146118_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52830869	52833624	.	-	.	ID=FBgn0004623.1.mrna1;geneID=FBgn0004623.1.path1;Name=FBgn0004623.1;Dir=sensecoverage=100.0;identity=99.0;matches=1034;mismatches=10;indels=0;unknowns=0;locus=RLOC_00007946
Chr1	stalkie_big_nohaplotig	exon	52830869	52830972	98	-	.	Parent=FBgn0004623.1.mrna1;Target=FBgn0004623.1 941 1044 +
Chr1	stalkie_big_nohaplotig	exon	52831032	52831118	100	-	.	Parent=FBgn0004623.1.mrna1;Target=FBgn0004623.1 854 940 +
Chr1	stalkie_big_nohaplotig	exon	52831177	52831306	98	-	.	Parent=FBgn0004623.1.mrna1;Target=FBgn0004623.1 724 853 +
Chr1	stalkie_big_nohaplotig	exon	52831364	52831565	99	-	.	Parent=FBgn0004623.1.mrna1;Target=FBgn0004623.1 522 723 +
Chr1	stalkie_big_nohaplotig	exon	52831628	52831857	99	-	.	Parent=FBgn0004623.1.mrna1;Target=FBgn0004623.1 292 521 +
Chr1	stalkie_big_nohaplotig	exon	52831926	52832051	100	-	.	Parent=FBgn0004623.1.mrna1;Target=FBgn0004623.1 166 291 +
Chr1	stalkie_big_nohaplotig	exon	52832110	52832199	98	-	.	Parent=FBgn0004623.1.mrna1;Target=FBgn0004623.1 76 165 +
Chr1	stalkie_big_nohaplotig	exon	52833550	52833624	98	-	.	Parent=FBgn0004623.1.mrna1;Target=FBgn0004623.1 1 75 +
Chr1	stalkie_big_nohaplotig	CDS	52830869	52830972	.	-	2	Parent=FBgn0004623.1.mrna1;Target=FBgn0004623.1 941 1044 +
Chr1	stalkie_big_nohaplotig	CDS	52831032	52831118	.	-	2	Parent=FBgn0004623.1.mrna1;Target=FBgn0004623.1 854 940 +
Chr1	stalkie_big_nohaplotig	CDS	52831177	52831306	.	-	0	Parent=FBgn0004623.1.mrna1;Target=FBgn0004623.1 724 853 +
Chr1	stalkie_big_nohaplotig	CDS	52831364	52831565	.	-	1	Parent=FBgn0004623.1.mrna1;Target=FBgn0004623.1 522 723 +
Chr1	stalkie_big_nohaplotig	CDS	52831628	52831857	.	-	0	Parent=FBgn0004623.1.mrna1;Target=FBgn0004623.1 292 521 +
Chr1	stalkie_big_nohaplotig	CDS	52831926	52832051	.	-	0	Parent=FBgn0004623.1.mrna1;Target=FBgn0004623.1 166 291 +
Chr1	stalkie_big_nohaplotig	CDS	52832110	52832199	.	-	0	Parent=FBgn0004623.1.mrna1;Target=FBgn0004623.1 76 165 +
Chr1	stalkie_big_nohaplotig	CDS	52833550	52833624	.	-	0	Parent=FBgn0004623.1.mrna1;Target=FBgn0004623.1 1 75 +
Chr1	stalkie_big_nohaplotig	mRNA	52833076	52833572	.	+	.	ID=comp146118_c0_seq1.mrna1;geneID=comp146118_c0_seq1.path1;Name=comp146118_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.0;matches=482;mismatches=11;indels=4;unknowns=0;Target=comp146118_c0_seq1 493 1 .;CDS_Target=comp146118_c0_seq1 81 73 .;locus=RLOC_00007946
Chr1	stalkie_big_nohaplotig	exon	52833076	52833572	96	+	.	Parent=comp146118_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52833148	52833160	.	+	0	Parent=comp146118_c0_seq1.mrna1
Chr1	gffcl	locus	52832389	52832902	.	+	.	ID=RLOC_00007947;geneIDs=comp146334_c0_seq1.path1;transcripts=comp146334_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52832389	52832902	.	+	.	ID=comp146334_c0_seq1.mrna1;geneID=comp146334_c0_seq1.path1;Name=comp146334_c0_seq1;Dir=indeterminatecoverage=99.0;identity=94.2;matches=485;mismatches=20;indels=10;unknowns=0;Target=comp146334_c0_seq1 507 2 .;CDS_Target=comp146334_c0_seq1 227 102 .;locus=RLOC_00007947
Chr1	stalkie_big_nohaplotig	exon	52832389	52832902	94	+	.	Parent=comp146334_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52832488	52832613	.	+	0	Parent=comp146334_c0_seq1.mrna1
Chr1	gffcl	locus	52833864	52834985	.	-	.	ID=RLOC_00007948;geneIDs=comp160851_c0_seq1.path1;transcripts=comp160851_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52833864	52834985	.	-	.	ID=comp160851_c0_seq1.mrna1;geneID=comp160851_c0_seq1.path1;Name=comp160851_c0_seq1;Dir=indeterminatecoverage=95.3;identity=97.1;matches=1094;mismatches=28;indels=5;unknowns=0;Target=comp160851_c0_seq1 1182 56 .;CDS_Target=comp160851_c0_seq1 1075 872 .;locus=RLOC_00007948
Chr1	stalkie_big_nohaplotig	exon	52833864	52834985	97	-	.	Parent=comp160851_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52833971	52834174	.	-	0	Parent=comp160851_c0_seq1.mrna1
Chr1	gffcl	locus	52841314	52846193	.	+	.	ID=RLOC_00007950;geneIDs=FBgn0036900.1.path1;transcripts=FBgn0036900.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52841314	52846193	.	+	.	ID=FBgn0036900.1.mrna1;geneID=FBgn0036900.1.path1;Name=FBgn0036900.1;Dir=sensecoverage=100.0;identity=99.8;matches=2260;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007950
Chr1	stalkie_big_nohaplotig	exon	52841314	52841620	100	+	.	Parent=FBgn0036900.1.mrna1;Target=FBgn0036900.1 1 307 +
Chr1	stalkie_big_nohaplotig	exon	52841686	52841830	100	+	.	Parent=FBgn0036900.1.mrna1;Target=FBgn0036900.1 308 452 +
Chr1	stalkie_big_nohaplotig	exon	52841978	52842648	100	+	.	Parent=FBgn0036900.1.mrna1;Target=FBgn0036900.1 453 1123 +
Chr1	stalkie_big_nohaplotig	exon	52842706	52842859	100	+	.	Parent=FBgn0036900.1.mrna1;Target=FBgn0036900.1 1124 1277 +
Chr1	stalkie_big_nohaplotig	exon	52845206	52846193	99	+	.	Parent=FBgn0036900.1.mrna1;Target=FBgn0036900.1 1278 2265 +
Chr1	stalkie_big_nohaplotig	CDS	52841314	52841620	.	+	0	Parent=FBgn0036900.1.mrna1;Target=FBgn0036900.1 1 307 +
Chr1	stalkie_big_nohaplotig	CDS	52841686	52841830	.	+	2	Parent=FBgn0036900.1.mrna1;Target=FBgn0036900.1 308 452 +
Chr1	stalkie_big_nohaplotig	CDS	52841978	52842648	.	+	1	Parent=FBgn0036900.1.mrna1;Target=FBgn0036900.1 453 1123 +
Chr1	stalkie_big_nohaplotig	CDS	52842706	52842859	.	+	2	Parent=FBgn0036900.1.mrna1;Target=FBgn0036900.1 1124 1277 +
Chr1	stalkie_big_nohaplotig	CDS	52845206	52846193	.	+	1	Parent=FBgn0036900.1.mrna1;Target=FBgn0036900.1 1278 2265 +
Chr1	gffcl	locus	52868589	52868675	.	-	.	ID=RLOC_00007951;geneIDs=FBgn0036899.1.path1;transcripts=FBgn0036899.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52868589	52868675	.	-	.	ID=FBgn0036899.1.mrna1;geneID=FBgn0036899.1.path1;Name=FBgn0036899.1;Dir=indeterminatecoverage=4.0;identity=98.9;matches=86;mismatches=1;indels=0;unknowns=0;Target=FBgn0036899.1 87 1 .;locus=RLOC_00007951
Chr1	stalkie_big_nohaplotig	exon	52868589	52868675	98	-	.	Parent=FBgn0036899.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52868589	52868675	.	-	0	Parent=FBgn0036899.1.mrna1
Chr1	gffcl	locus	52923282	52923867	.	+	.	ID=RLOC_00007952;geneIDs=comp154767_c0_seq1.path1;transcripts=comp154767_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52923282	52923867	.	+	.	ID=comp154767_c0_seq1.mrna1;geneID=comp154767_c0_seq1.path1;Name=comp154767_c0_seq1;Dir=antisensecoverage=93.1;identity=99.8;matches=514;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007952
Chr1	stalkie_big_nohaplotig	exon	52923282	52923383	100	+	.	Parent=comp154767_c0_seq1.mrna1;Target=comp154767_c0_seq1 424 525 -
Chr1	stalkie_big_nohaplotig	exon	52923455	52923867	99	+	.	Parent=comp154767_c0_seq1.mrna1;Target=comp154767_c0_seq1 11 423 -
Chr1	stalkie_big_nohaplotig	CDS	52923350	52923383	.	+	0	Parent=comp154767_c0_seq1.mrna1;Target=comp154767_c0_seq1 424 457 .
Chr1	stalkie_big_nohaplotig	CDS	52923455	52923720	.	+	2	Parent=comp154767_c0_seq1.mrna1;Target=comp154767_c0_seq1 158 423 .
Chr1	gffcl	locus	52933486	52934122	.	+	.	ID=RLOC_00007953;geneIDs=comp117487_c0_seq1.path1,comp165144_c0_seq1.path1;transcripts=comp117487_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52933799	52934122	.	+	.	ID=comp117487_c0_seq1.mrna1;geneID=comp117487_c0_seq1.path1;Name=comp117487_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=324;mismatches=0;indels=0;unknowns=0;Target=comp117487_c0_seq1 324 1 .;CDS_Target=comp117487_c0_seq1 42 1 .;locus=RLOC_00007953
Chr1	stalkie_big_nohaplotig	exon	52933799	52934122	100	+	.	Parent=comp117487_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52933799	52933840	.	+	0	Parent=comp117487_c0_seq1.mrna1
Chr1	gffcl	locus	52941537	52942034	.	+	.	ID=RLOC_00007954;geneIDs=comp146060_c0_seq1.path1;transcripts=comp146060_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52941537	52942034	.	+	.	ID=comp146060_c0_seq1.mrna1;geneID=comp146060_c0_seq1.path1;Name=comp146060_c0_seq1;Dir=antisensecoverage=96.4;identity=88.9;matches=383;mismatches=47;indels=1;unknowns=0;locus=RLOC_00007954
Chr1	stalkie_big_nohaplotig	exon	52941537	52941718	98	+	.	Parent=comp146060_c0_seq1.mrna1;Target=comp146060_c0_seq1 265 446 -
Chr1	stalkie_big_nohaplotig	exon	52941786	52942034	81	+	.	Parent=comp146060_c0_seq1.mrna1;Target=comp146060_c0_seq1 17 264 -
Chr1	stalkie_big_nohaplotig	CDS	52941685	52941718	.	+	0	Parent=comp146060_c0_seq1.mrna1;Target=comp146060_c0_seq1 265 298 .
Chr1	stalkie_big_nohaplotig	CDS	52941786	52941982	.	+	2	Parent=comp146060_c0_seq1.mrna1;Target=comp146060_c0_seq1 68 264 .
Chr1	gffcl	locus	52942388	52943561	.	+	.	ID=RLOC_00007955;geneIDs=comp146899_c1_seq1.path1;transcripts=comp146899_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52942388	52943561	.	+	.	ID=comp146899_c1_seq1.mrna1;geneID=comp146899_c1_seq1.path1;Name=comp146899_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1171;mismatches=3;indels=0;unknowns=0;Target=comp146899_c1_seq1 1174 1 .;CDS_Target=comp146899_c1_seq1 119 3 .;locus=RLOC_00007955
Chr1	stalkie_big_nohaplotig	exon	52942388	52943561	99	+	.	Parent=comp146899_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52942390	52942506	.	+	0	Parent=comp146899_c1_seq1.mrna1
Chr1	gffcl	locus	52964830	52979497	.	+	.	ID=RLOC_00007956;geneIDs=FBgn0036899.1.path2;transcripts=FBgn0036899.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	52964830	52979497	.	+	.	ID=FBgn0036899.1.mrna2;geneID=FBgn0036899.1.path2;Name=FBgn0036899.1;Dir=sensecoverage=96.0;identity=99.8;matches=2092;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007956
Chr1	stalkie_big_nohaplotig	exon	52964830	52965066	100	+	.	Parent=FBgn0036899.1.mrna2;Target=FBgn0036899.1 88 324 +
Chr1	stalkie_big_nohaplotig	exon	52965348	52965495	100	+	.	Parent=FBgn0036899.1.mrna2;Target=FBgn0036899.1 325 472 +
Chr1	stalkie_big_nohaplotig	exon	52975535	52976013	99	+	.	Parent=FBgn0036899.1.mrna2;Target=FBgn0036899.1 473 951 +
Chr1	stalkie_big_nohaplotig	exon	52976211	52976372	99	+	.	Parent=FBgn0036899.1.mrna2;Target=FBgn0036899.1 952 1113 +
Chr1	stalkie_big_nohaplotig	exon	52978100	52978505	99	+	.	Parent=FBgn0036899.1.mrna2;Target=FBgn0036899.1 1114 1519 +
Chr1	stalkie_big_nohaplotig	exon	52978568	52978784	99	+	.	Parent=FBgn0036899.1.mrna2;Target=FBgn0036899.1 1520 1736 +
Chr1	stalkie_big_nohaplotig	exon	52978863	52979124	100	+	.	Parent=FBgn0036899.1.mrna2;Target=FBgn0036899.1 1737 1998 +
Chr1	stalkie_big_nohaplotig	exon	52979312	52979497	100	+	.	Parent=FBgn0036899.1.mrna2;Target=FBgn0036899.1 1999 2184 +
Chr1	stalkie_big_nohaplotig	CDS	52964830	52965066	.	+	0	Parent=FBgn0036899.1.mrna2;Target=FBgn0036899.1 88 324 +
Chr1	stalkie_big_nohaplotig	CDS	52965348	52965495	.	+	0	Parent=FBgn0036899.1.mrna2;Target=FBgn0036899.1 325 472 +
Chr1	stalkie_big_nohaplotig	CDS	52975535	52976013	.	+	2	Parent=FBgn0036899.1.mrna2;Target=FBgn0036899.1 473 951 +
Chr1	stalkie_big_nohaplotig	CDS	52976211	52976372	.	+	0	Parent=FBgn0036899.1.mrna2;Target=FBgn0036899.1 952 1113 +
Chr1	stalkie_big_nohaplotig	CDS	52978100	52978505	.	+	0	Parent=FBgn0036899.1.mrna2;Target=FBgn0036899.1 1114 1519 +
Chr1	stalkie_big_nohaplotig	CDS	52978568	52978784	.	+	2	Parent=FBgn0036899.1.mrna2;Target=FBgn0036899.1 1520 1736 +
Chr1	stalkie_big_nohaplotig	CDS	52978863	52979124	.	+	1	Parent=FBgn0036899.1.mrna2;Target=FBgn0036899.1 1737 1998 +
Chr1	stalkie_big_nohaplotig	CDS	52979312	52979497	.	+	0	Parent=FBgn0036899.1.mrna2;Target=FBgn0036899.1 1999 2184 +
Chr1	gffcl	locus	52983014	52991202	.	+	.	ID=RLOC_00007957;geneIDs=FBgn0022774.1.path1;transcripts=FBgn0022774.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52983014	52991202	.	+	.	ID=FBgn0022774.1.mrna1;geneID=FBgn0022774.1.path1;Name=FBgn0022774.1;Dir=sensecoverage=99.7;identity=99.5;matches=1289;mismatches=6;indels=0;unknowns=0;locus=RLOC_00007957
Chr1	stalkie_big_nohaplotig	exon	52983014	52983335	100	+	.	Parent=FBgn0022774.1.mrna1;Target=FBgn0022774.1 5 326 +
Chr1	stalkie_big_nohaplotig	exon	52989152	52989320	99	+	.	Parent=FBgn0022774.1.mrna1;Target=FBgn0022774.1 327 495 +
Chr1	stalkie_big_nohaplotig	exon	52990156	52990296	100	+	.	Parent=FBgn0022774.1.mrna1;Target=FBgn0022774.1 496 636 +
Chr1	stalkie_big_nohaplotig	exon	52990350	52990854	99	+	.	Parent=FBgn0022774.1.mrna1;Target=FBgn0022774.1 637 1141 +
Chr1	stalkie_big_nohaplotig	exon	52991045	52991202	98	+	.	Parent=FBgn0022774.1.mrna1;Target=FBgn0022774.1 1142 1299 +
Chr1	stalkie_big_nohaplotig	CDS	52983016	52983335	.	+	0	Parent=FBgn0022774.1.mrna1;Target=FBgn0022774.1 7 326 +
Chr1	stalkie_big_nohaplotig	CDS	52989152	52989320	.	+	1	Parent=FBgn0022774.1.mrna1;Target=FBgn0022774.1 327 495 +
Chr1	stalkie_big_nohaplotig	CDS	52990156	52990296	.	+	0	Parent=FBgn0022774.1.mrna1;Target=FBgn0022774.1 496 636 +
Chr1	stalkie_big_nohaplotig	CDS	52990350	52990854	.	+	0	Parent=FBgn0022774.1.mrna1;Target=FBgn0022774.1 637 1141 +
Chr1	stalkie_big_nohaplotig	CDS	52991045	52991202	.	+	2	Parent=FBgn0022774.1.mrna1;Target=FBgn0022774.1 1142 1299 +
Chr1	gffcl	locus	52983718	52984109	.	-	.	ID=RLOC_00007958;geneIDs=comp136815_c0_seq1.path1;transcripts=comp136815_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52983718	52984109	.	-	.	ID=comp136815_c0_seq1.mrna1;geneID=comp136815_c0_seq1.path1;Name=comp136815_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=379;mismatches=13;indels=0;unknowns=0;Target=comp136815_c0_seq1 392 1 .;CDS_Target=comp136815_c0_seq1 164 96 .;locus=RLOC_00007958
Chr1	stalkie_big_nohaplotig	exon	52983718	52984109	96	-	.	Parent=comp136815_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52983946	52984014	.	-	0	Parent=comp136815_c0_seq1.mrna1
Chr1	gffcl	locus	52984316	52985029	.	+	.	ID=RLOC_00007959;geneIDs=comp137789_c0_seq1.path1;transcripts=comp137789_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52984316	52985029	.	+	.	ID=comp137789_c0_seq1.mrna1;geneID=comp137789_c0_seq1.path1;Name=comp137789_c0_seq1;Dir=indeterminatecoverage=97.5;identity=92.6;matches=662;mismatches=30;indels=23;unknowns=0;Target=comp137789_c0_seq1 711 19 .;CDS_Target=comp137789_c0_seq1 602 594 .;locus=RLOC_00007959
Chr1	stalkie_big_nohaplotig	exon	52984316	52985029	92	+	.	Parent=comp137789_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52984912	52984920	.	+	0	Parent=comp137789_c0_seq1.mrna1
Chr1	gffcl	locus	52991434	52991824	.	-	.	ID=RLOC_00007960;geneIDs=comp715164_c0_seq1.path1;transcripts=comp715164_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52991434	52991824	.	-	.	ID=comp715164_c0_seq1.mrna1;geneID=comp715164_c0_seq1.path1;Name=comp715164_c0_seq1;Dir=indeterminatecoverage=94.9;identity=96.9;matches=381;mismatches=10;indels=2;unknowns=0;Target=comp715164_c0_seq1 394 2 .;CDS_Target=comp715164_c0_seq1 329 198 .;locus=RLOC_00007960
Chr1	stalkie_big_nohaplotig	exon	52991434	52991824	96	-	.	Parent=comp715164_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52991499	52991630	.	-	0	Parent=comp715164_c0_seq1.mrna1
Chr1	gffcl	locus	52992417	52993418	.	+	.	ID=RLOC_00007961;geneIDs=comp148504_c0_seq1.path1;transcripts=comp148504_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	52992417	52993418	.	+	.	ID=comp148504_c0_seq1.mrna1;geneID=comp148504_c0_seq1.path1;Name=comp148504_c0_seq1;Dir=indeterminatecoverage=99.8;identity=96.5;matches=979;mismatches=21;indels=15;unknowns=0;Target=comp148504_c0_seq1 1015 3 .;CDS_Target=comp148504_c0_seq1 246 136 .;locus=RLOC_00007961
Chr1	stalkie_big_nohaplotig	exon	52992417	52993418	96	+	.	Parent=comp148504_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	52992548	52992650	.	+	0	Parent=comp148504_c0_seq1.mrna1
Chr1	gffcl	locus	53013697	53014859	.	+	.	ID=RLOC_00007962;geneIDs=ORF2709.path1;transcripts=ORF2709.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53013697	53014859	.	+	.	ID=ORF2709.mrna1;geneID=ORF2709.path1;Name=ORF2709;Dir=sensecoverage=100.0;identity=99.5;matches=815;mismatches=4;indels=0;unknowns=0;locus=RLOC_00007962
Chr1	stalkie_big_nohaplotig	exon	53013697	53013745	100	+	.	Parent=ORF2709.mrna1;Target=ORF2709 1 49 +
Chr1	stalkie_big_nohaplotig	exon	53013814	53014266	99	+	.	Parent=ORF2709.mrna1;Target=ORF2709 50 502 +
Chr1	stalkie_big_nohaplotig	exon	53014405	53014473	100	+	.	Parent=ORF2709.mrna1;Target=ORF2709 503 571 +
Chr1	stalkie_big_nohaplotig	exon	53014612	53014859	98	+	.	Parent=ORF2709.mrna1;Target=ORF2709 572 819 +
Chr1	stalkie_big_nohaplotig	CDS	53013697	53013745	.	+	0	Parent=ORF2709.mrna1;Target=ORF2709 1 49 +
Chr1	stalkie_big_nohaplotig	CDS	53013814	53014266	.	+	2	Parent=ORF2709.mrna1;Target=ORF2709 50 502 +
Chr1	stalkie_big_nohaplotig	CDS	53014405	53014473	.	+	2	Parent=ORF2709.mrna1;Target=ORF2709 503 571 +
Chr1	stalkie_big_nohaplotig	CDS	53014612	53014859	.	+	2	Parent=ORF2709.mrna1;Target=ORF2709 572 819 +
Chr1	gffcl	locus	53015107	53015944	.	-	.	ID=RLOC_00007963;geneIDs=comp159629_c1_seq1.path1;transcripts=comp159629_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53015107	53015944	.	-	.	ID=comp159629_c1_seq1.mrna1;geneID=comp159629_c1_seq1.path1;Name=comp159629_c1_seq1;Dir=indeterminatecoverage=99.9;identity=99.2;matches=836;mismatches=2;indels=5;unknowns=0;Target=comp159629_c1_seq1 844 2 .;CDS_Target=comp159629_c1_seq1 459 331 .;locus=RLOC_00007963
Chr1	stalkie_big_nohaplotig	exon	53015107	53015944	99	-	.	Parent=comp159629_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	53015492	53015620	.	-	0	Parent=comp159629_c1_seq1.mrna1
Chr1	gffcl	locus	53021589	53024137	.	+	.	ID=RLOC_00007964;geneIDs=FBgn0015239.1.path1;transcripts=FBgn0015239.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53021589	53024137	.	+	.	ID=FBgn0015239.1.mrna1;geneID=FBgn0015239.1.path1;Name=FBgn0015239.1;Dir=sensecoverage=100.0;identity=99.5;matches=1905;mismatches=9;indels=0;unknowns=0;locus=RLOC_00007964
Chr1	stalkie_big_nohaplotig	exon	53021589	53021742	98	+	.	Parent=FBgn0015239.1.mrna1;Target=FBgn0015239.1 1 154 +
Chr1	stalkie_big_nohaplotig	exon	53021835	53022107	99	+	.	Parent=FBgn0015239.1.mrna1;Target=FBgn0015239.1 155 427 +
Chr1	stalkie_big_nohaplotig	exon	53022518	53022835	98	+	.	Parent=FBgn0015239.1.mrna1;Target=FBgn0015239.1 428 745 +
Chr1	stalkie_big_nohaplotig	exon	53022907	53023275	99	+	.	Parent=FBgn0015239.1.mrna1;Target=FBgn0015239.1 746 1114 +
Chr1	stalkie_big_nohaplotig	exon	53023338	53024137	100	+	.	Parent=FBgn0015239.1.mrna1;Target=FBgn0015239.1 1115 1914 +
Chr1	stalkie_big_nohaplotig	CDS	53021589	53021742	.	+	0	Parent=FBgn0015239.1.mrna1;Target=FBgn0015239.1 1 154 +
Chr1	stalkie_big_nohaplotig	CDS	53021835	53022107	.	+	2	Parent=FBgn0015239.1.mrna1;Target=FBgn0015239.1 155 427 +
Chr1	stalkie_big_nohaplotig	CDS	53022518	53022835	.	+	2	Parent=FBgn0015239.1.mrna1;Target=FBgn0015239.1 428 745 +
Chr1	stalkie_big_nohaplotig	CDS	53022907	53023275	.	+	2	Parent=FBgn0015239.1.mrna1;Target=FBgn0015239.1 746 1114 +
Chr1	stalkie_big_nohaplotig	CDS	53023338	53024137	.	+	2	Parent=FBgn0015239.1.mrna1;Target=FBgn0015239.1 1115 1914 +
Chr1	gffcl	locus	53028185	53033010	.	-	.	ID=RLOC_00007965;geneIDs=FBgn0036515.1.path1;transcripts=FBgn0036515.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53028185	53033010	.	-	.	ID=FBgn0036515.1.mrna1;geneID=FBgn0036515.1.path1;Name=FBgn0036515.1;Dir=sensecoverage=100.0;identity=99.9;matches=1010;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007965
Chr1	stalkie_big_nohaplotig	exon	53028185	53028558	99	-	.	Parent=FBgn0036515.1.mrna1;Target=FBgn0036515.1 638 1011 +
Chr1	stalkie_big_nohaplotig	exon	53029923	53030151	100	-	.	Parent=FBgn0036515.1.mrna1;Target=FBgn0036515.1 409 637 +
Chr1	stalkie_big_nohaplotig	exon	53030209	53030373	100	-	.	Parent=FBgn0036515.1.mrna1;Target=FBgn0036515.1 244 408 +
Chr1	stalkie_big_nohaplotig	exon	53032678	53032779	100	-	.	Parent=FBgn0036515.1.mrna1;Target=FBgn0036515.1 142 243 +
Chr1	stalkie_big_nohaplotig	exon	53032870	53033010	100	-	.	Parent=FBgn0036515.1.mrna1;Target=FBgn0036515.1 1 141 +
Chr1	stalkie_big_nohaplotig	CDS	53028185	53028558	.	-	2	Parent=FBgn0036515.1.mrna1;Target=FBgn0036515.1 638 1011 +
Chr1	stalkie_big_nohaplotig	CDS	53029923	53030151	.	-	0	Parent=FBgn0036515.1.mrna1;Target=FBgn0036515.1 409 637 +
Chr1	stalkie_big_nohaplotig	CDS	53030209	53030373	.	-	0	Parent=FBgn0036515.1.mrna1;Target=FBgn0036515.1 244 408 +
Chr1	stalkie_big_nohaplotig	CDS	53032678	53032779	.	-	0	Parent=FBgn0036515.1.mrna1;Target=FBgn0036515.1 142 243 +
Chr1	stalkie_big_nohaplotig	CDS	53032870	53033010	.	-	0	Parent=FBgn0036515.1.mrna1;Target=FBgn0036515.1 1 141 +
Chr1	gffcl	locus	53035428	53037109	.	-	.	ID=RLOC_00007966;geneIDs=FBgn0036514.1.path1;transcripts=FBgn0036514.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53035428	53037109	.	-	.	ID=FBgn0036514.1.mrna1;geneID=FBgn0036514.1.path1;Name=FBgn0036514.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1674;mismatches=8;indels=1;unknowns=0;Target=FBgn0036514.1 1683 1 .;CDS_Target=FBgn0036514.1 59 3 .;locus=RLOC_00007966
Chr1	stalkie_big_nohaplotig	exon	53035428	53037109	99	-	.	Parent=FBgn0036514.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	53037052	53037107	.	-	0	Parent=FBgn0036514.1.mrna1
Chr1	gffcl	locus	53054083	53054892	.	+	.	ID=RLOC_00007968;geneIDs=FBgn0036519.1.path1;transcripts=FBgn0036519.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53054083	53054892	.	+	.	ID=FBgn0036519.1.mrna1;geneID=FBgn0036519.1.path1;Name=FBgn0036519.1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=797;mismatches=13;indels=0;unknowns=0;Target=FBgn0036519.1 810 1 .;locus=RLOC_00007968
Chr1	stalkie_big_nohaplotig	exon	53054083	53054892	98	+	.	Parent=FBgn0036519.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	53054083	53054892	.	+	0	Parent=FBgn0036519.1.mrna1
Chr1	gffcl	locus	53056170	53056398	.	-	.	ID=RLOC_00007969;geneIDs=comp141652_c0_seq1.path1;transcripts=comp141652_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53056170	53056398	.	-	.	ID=comp141652_c0_seq1.mrna1;geneID=comp141652_c0_seq1.path1;Name=comp141652_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=228;mismatches=1;indels=2;unknowns=0;Target=comp141652_c0_seq1 231 1 .;CDS_Target=comp141652_c0_seq1 48 1 .;locus=RLOC_00007969
Chr1	stalkie_big_nohaplotig	exon	53056170	53056398	98	-	.	Parent=comp141652_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	53056351	53056398	.	-	0	Parent=comp141652_c0_seq1.mrna1
Chr1	gffcl	locus	53057659	53058128	.	+	.	ID=RLOC_00007970;geneIDs=comp145260_c0_seq1.path1;transcripts=comp145260_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53057659	53058128	.	+	.	ID=comp145260_c0_seq1.mrna1;geneID=comp145260_c0_seq1.path1;Name=comp145260_c0_seq1;Dir=indeterminatecoverage=95.6;identity=93.7;matches=447;mismatches=21;indels=9;unknowns=0;Target=comp145260_c0_seq1 475 1 .;CDS_Target=comp145260_c0_seq1 447 262 .;locus=RLOC_00007970
Chr1	stalkie_big_nohaplotig	exon	53057659	53058128	93	+	.	Parent=comp145260_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	53057918	53058100	.	+	0	Parent=comp145260_c0_seq1.mrna1
Chr1	gffcl	locus	53058400	53058719	.	+	.	ID=RLOC_00007971;geneIDs=comp155084_c0_seq1.path1;transcripts=comp155084_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53058400	53058719	.	+	.	ID=comp155084_c0_seq1.mrna1;geneID=comp155084_c0_seq1.path1;Name=comp155084_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=314;mismatches=6;indels=0;unknowns=0;Target=comp155084_c0_seq1 320 1 .;CDS_Target=comp155084_c0_seq1 134 42 .;locus=RLOC_00007971
Chr1	stalkie_big_nohaplotig	exon	53058400	53058719	98	+	.	Parent=comp155084_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	53058441	53058533	.	+	0	Parent=comp155084_c0_seq1.mrna1
Chr1	gffcl	locus	53062100	53062574	.	-	.	ID=RLOC_00007972;geneIDs=comp141241_c0_seq1.path1;transcripts=comp141241_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53062100	53062574	.	-	.	ID=comp141241_c0_seq1.mrna1;geneID=comp141241_c0_seq1.path1;Name=comp141241_c0_seq1;Dir=indeterminatecoverage=93.8;identity=92.8;matches=452;mismatches=22;indels=13;unknowns=0;Target=comp141241_c0_seq1 518 33 .;CDS_Target=comp141241_c0_seq1 364 206 .;locus=RLOC_00007972
Chr1	stalkie_big_nohaplotig	exon	53062100	53062574	92	-	.	Parent=comp141241_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	53062249	53062403	.	-	0	Parent=comp141241_c0_seq1.mrna1
Chr1	gffcl	locus	53064276	53064582	.	+	.	ID=RLOC_00007973;geneIDs=comp143374_c0_seq1.path1;transcripts=comp143374_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53064276	53064582	.	+	.	ID=comp143374_c0_seq1.mrna1;geneID=comp143374_c0_seq1.path1;Name=comp143374_c0_seq1;Dir=indeterminatecoverage=99.4;identity=90.9;matches=291;mismatches=12;indels=17;unknowns=0;Target=comp143374_c0_seq1 318 3 .;CDS_Target=comp143374_c0_seq1 104 63 .;locus=RLOC_00007973
Chr1	stalkie_big_nohaplotig	exon	53064276	53064582	90	+	.	Parent=comp143374_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	53064323	53064364	.	+	0	Parent=comp143374_c0_seq1.mrna1
Chr1	gffcl	locus	53067520	53067569	.	-	.	ID=RLOC_00007974;geneIDs=comp157942_c0_seq1.path2;transcripts=comp157942_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	53067520	53067569	.	-	.	ID=comp157942_c0_seq1.mrna2;geneID=comp157942_c0_seq1.path2;Name=comp157942_c0_seq1;Dir=indeterminatecoverage=3.0;identity=100.0;matches=50;mismatches=0;indels=0;unknowns=0;Target=comp157942_c0_seq1 1651 1602 .;locus=RLOC_00007974
Chr1	stalkie_big_nohaplotig	exon	53067520	53067569	100	-	.	Parent=comp157942_c0_seq1.mrna2
Chr1	gffcl	locus	53068389	53069452	.	+	.	ID=RLOC_00007975;geneIDs=comp152878_c0_seq1.path1;transcripts=comp152878_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53068389	53069452	.	+	.	ID=comp152878_c0_seq1.mrna1;geneID=comp152878_c0_seq1.path1;Name=comp152878_c0_seq1;Dir=indeterminatecoverage=98.9;identity=98.5;matches=1051;mismatches=12;indels=4;unknowns=0;Target=comp152878_c0_seq1 1078 13 .;CDS_Target=comp152878_c0_seq1 266 93 .;locus=RLOC_00007975
Chr1	stalkie_big_nohaplotig	exon	53068389	53069452	98	+	.	Parent=comp152878_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	53068469	53068640	.	+	0	Parent=comp152878_c0_seq1.mrna1
Chr1	gffcl	locus	53073120	53073986	.	-	.	ID=RLOC_00007976;geneIDs=comp155274_c0_seq1.path1;transcripts=comp155274_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53073120	53073986	.	-	.	ID=comp155274_c0_seq1.mrna1;geneID=comp155274_c0_seq1.path1;Name=comp155274_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.5;matches=864;mismatches=3;indels=1;unknowns=0;Target=comp155274_c0_seq1 877 10 .;CDS_Target=comp155274_c0_seq1 170 12 .;locus=RLOC_00007976
Chr1	stalkie_big_nohaplotig	exon	53073120	53073986	99	-	.	Parent=comp155274_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	53073826	53073984	.	-	0	Parent=comp155274_c0_seq1.mrna1
Chr1	gffcl	locus	53074014	53111325	.	-	.	ID=RLOC_00007977;geneIDs=FBgn0036518.1.path1;transcripts=FBgn0036518.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53074014	53111325	.	-	.	ID=FBgn0036518.1.mrna1;geneID=FBgn0036518.1.path1;Name=FBgn0036518.1;Dir=sensecoverage=100.0;identity=99.8;matches=1791;mismatches=3;indels=0;unknowns=0;locus=RLOC_00007977
Chr1	stalkie_big_nohaplotig	exon	53074014	53074867	99	-	.	Parent=FBgn0036518.1.mrna1;Target=FBgn0036518.1 941 1794 +
Chr1	stalkie_big_nohaplotig	exon	53075279	53075341	100	-	.	Parent=FBgn0036518.1.mrna1;Target=FBgn0036518.1 878 940 +
Chr1	stalkie_big_nohaplotig	exon	53076659	53076842	100	-	.	Parent=FBgn0036518.1.mrna1;Target=FBgn0036518.1 694 877 +
Chr1	stalkie_big_nohaplotig	exon	53076911	53077112	100	-	.	Parent=FBgn0036518.1.mrna1;Target=FBgn0036518.1 492 693 +
Chr1	stalkie_big_nohaplotig	exon	53110835	53111325	99	-	.	Parent=FBgn0036518.1.mrna1;Target=FBgn0036518.1 1 491 +
Chr1	stalkie_big_nohaplotig	CDS	53074014	53074867	.	-	2	Parent=FBgn0036518.1.mrna1;Target=FBgn0036518.1 941 1794 +
Chr1	stalkie_big_nohaplotig	CDS	53075279	53075341	.	-	2	Parent=FBgn0036518.1.mrna1;Target=FBgn0036518.1 878 940 +
Chr1	stalkie_big_nohaplotig	CDS	53076659	53076842	.	-	0	Parent=FBgn0036518.1.mrna1;Target=FBgn0036518.1 694 877 +
Chr1	stalkie_big_nohaplotig	CDS	53076911	53077112	.	-	1	Parent=FBgn0036518.1.mrna1;Target=FBgn0036518.1 492 693 +
Chr1	stalkie_big_nohaplotig	CDS	53110835	53111325	.	-	0	Parent=FBgn0036518.1.mrna1;Target=FBgn0036518.1 1 491 +
Chr1	gffcl	locus	53162589	53190738	.	+	.	ID=RLOC_00007978;geneIDs=ORF361.path1;transcripts=ORF361.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53162589	53190738	.	+	.	ID=ORF361.mrna1;geneID=ORF361.path1;Name=ORF361;Dir=sensecoverage=100.0;identity=99.7;matches=1954;mismatches=5;indels=0;unknowns=0;locus=RLOC_00007978
Chr1	stalkie_big_nohaplotig	exon	53162589	53163204	100	+	.	Parent=ORF361.mrna1;Target=ORF361 1 616 +
Chr1	stalkie_big_nohaplotig	exon	53189337	53189879	99	+	.	Parent=ORF361.mrna1;Target=ORF361 617 1159 +
Chr1	stalkie_big_nohaplotig	exon	53189939	53190738	99	+	.	Parent=ORF361.mrna1;Target=ORF361 1160 1959 +
Chr1	stalkie_big_nohaplotig	CDS	53162589	53163204	.	+	0	Parent=ORF361.mrna1;Target=ORF361 1 616 +
Chr1	stalkie_big_nohaplotig	CDS	53189337	53189879	.	+	2	Parent=ORF361.mrna1;Target=ORF361 617 1159 +
Chr1	stalkie_big_nohaplotig	CDS	53189939	53190738	.	+	2	Parent=ORF361.mrna1;Target=ORF361 1160 1959 +
Chr1	gffcl	locus	53192140	53193340	.	-	.	ID=RLOC_00007979;geneIDs=comp155741_c0_seq1.path1;transcripts=comp155741_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53192140	53193340	.	-	.	ID=comp155741_c0_seq1.mrna1;geneID=comp155741_c0_seq1.path1;Name=comp155741_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.2;matches=1194;mismatches=7;indels=3;unknowns=0;Target=comp155741_c0_seq1 1206 3 .;CDS_Target=comp155741_c0_seq1 48 4 .;locus=RLOC_00007979
Chr1	stalkie_big_nohaplotig	exon	53192140	53193340	99	-	.	Parent=comp155741_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	53193296	53193339	.	-	0	Parent=comp155741_c0_seq1.mrna1
Chr1	gffcl	locus	53222216	53222813	.	+	.	ID=RLOC_00007980;geneIDs=comp112924_c0_seq1.path1;transcripts=comp112924_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53222216	53222813	.	+	.	ID=comp112924_c0_seq1.mrna1;geneID=comp112924_c0_seq1.path1;Name=comp112924_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=598;mismatches=0;indels=0;unknowns=0;Target=comp112924_c0_seq1 598 1 .;CDS_Target=comp112924_c0_seq1 76 2 .;locus=RLOC_00007980
Chr1	stalkie_big_nohaplotig	exon	53222216	53222813	100	+	.	Parent=comp112924_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	53222217	53222291	.	+	0	Parent=comp112924_c0_seq1.mrna1
Chr1	gffcl	locus	53228629	53229476	.	-	.	ID=RLOC_00007981;geneIDs=comp161697_c0_seq1.path1;transcripts=comp161697_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53228629	53229476	.	-	.	ID=comp161697_c0_seq1.mrna1;geneID=comp161697_c0_seq1.path1;Name=comp161697_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=829;mismatches=17;indels=2;unknowns=0;Target=comp161697_c0_seq1 846 1 .;CDS_Target=comp161697_c0_seq1 236 102 .;locus=RLOC_00007981
Chr1	stalkie_big_nohaplotig	exon	53228629	53229476	97	-	.	Parent=comp161697_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	53229241	53229375	.	-	0	Parent=comp161697_c0_seq1.mrna1
Chr1	gffcl	locus	53231633	53232860	.	-	.	ID=RLOC_00007982;geneIDs=FBgn0086785.1.path1;transcripts=FBgn0086785.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53231633	53232860	.	-	.	ID=FBgn0086785.1.mrna1;geneID=FBgn0086785.1.path1;Name=FBgn0086785.1;Dir=sensecoverage=100.0;identity=99.8;matches=1168;mismatches=1;indels=1;unknowns=0;locus=RLOC_00007982
Chr1	stalkie_big_nohaplotig	exon	53231633	53232727	99	-	.	Parent=FBgn0086785.1.mrna1;Target=FBgn0086785.1 75 1170 +
Chr1	stalkie_big_nohaplotig	exon	53232787	53232860	100	-	.	Parent=FBgn0086785.1.mrna1;Target=FBgn0086785.1 1 74 +
Chr1	stalkie_big_nohaplotig	CDS	53232717	53232727	.	-	0	Parent=FBgn0086785.1.mrna1;Target=FBgn0086785.1 75 86 +
Chr1	stalkie_big_nohaplotig	CDS	53232787	53232858	.	-	0	Parent=FBgn0086785.1.mrna1;Target=FBgn0086785.1 3 74 +
Chr1	gffcl	locus	53235420	53237820	.	+	.	ID=RLOC_00007983;geneIDs=FBgn0036376.1.path1;transcripts=FBgn0036376.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53235420	53237820	.	+	.	ID=FBgn0036376.1.mrna1;geneID=FBgn0036376.1.path1;Name=FBgn0036376.1;Dir=sensecoverage=100.0;identity=100.0;matches=2264;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007983
Chr1	stalkie_big_nohaplotig	exon	53235420	53235749	99	+	.	Parent=FBgn0036376.1.mrna1;Target=FBgn0036376.1 1 330 +
Chr1	stalkie_big_nohaplotig	exon	53235813	53236810	100	+	.	Parent=FBgn0036376.1.mrna1;Target=FBgn0036376.1 331 1328 +
Chr1	stalkie_big_nohaplotig	exon	53236884	53237820	100	+	.	Parent=FBgn0036376.1.mrna1;Target=FBgn0036376.1 1329 2265 +
Chr1	stalkie_big_nohaplotig	CDS	53235420	53235749	.	+	0	Parent=FBgn0036376.1.mrna1;Target=FBgn0036376.1 1 330 +
Chr1	stalkie_big_nohaplotig	CDS	53235813	53236810	.	+	0	Parent=FBgn0036376.1.mrna1;Target=FBgn0036376.1 331 1328 +
Chr1	stalkie_big_nohaplotig	CDS	53236884	53237820	.	+	1	Parent=FBgn0036376.1.mrna1;Target=FBgn0036376.1 1329 2265 +
Chr1	gffcl	locus	53243952	53246100	.	-	.	ID=RLOC_00007984;geneIDs=FBgn0036377.1.path1;transcripts=FBgn0036377.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53243952	53246100	.	-	.	ID=FBgn0036377.1.mrna1;geneID=FBgn0036377.1.path1;Name=FBgn0036377.1;Dir=indeterminatecoverage=99.1;identity=100.0;matches=2149;mismatches=0;indels=0;unknowns=0;Target=FBgn0036377.1 2158 10 .;CDS_Target=FBgn0036377.1 2157 10 .;locus=RLOC_00007984
Chr1	stalkie_big_nohaplotig	exon	53243952	53246100	100	-	.	Parent=FBgn0036377.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	53243953	53246100	.	-	0	Parent=FBgn0036377.1.mrna1
Chr1	gffcl	locus	53268914	53270815	.	+	.	ID=RLOC_00007985;geneIDs=ORF394.path2;transcripts=ORF394.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	53268914	53270815	.	+	.	ID=ORF394.mrna2;geneID=ORF394.path2;Name=ORF394;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1881;mismatches=21;indels=0;unknowns=0;Target=ORF394 1902 1 .;locus=RLOC_00007985
Chr1	stalkie_big_nohaplotig	exon	53268914	53270815	98	+	.	Parent=ORF394.mrna2
Chr1	stalkie_big_nohaplotig	CDS	53268914	53270815	.	+	0	Parent=ORF394.mrna2
Chr1	gffcl	locus	53307332	53308328	.	-	.	ID=RLOC_00007986;geneIDs=comp157346_c0_seq1.path1;transcripts=comp157346_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53307332	53308328	.	-	.	ID=comp157346_c0_seq1.mrna1;geneID=comp157346_c0_seq1.path1;Name=comp157346_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=986;mismatches=5;indels=13;unknowns=0;Target=comp157346_c0_seq1 998 1 .;CDS_Target=comp157346_c0_seq1 932 720 .;locus=RLOC_00007986
Chr1	stalkie_big_nohaplotig	exon	53307332	53308328	98	-	.	Parent=comp157346_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	53307398	53307614	.	-	0	Parent=comp157346_c0_seq1.mrna1
Chr1	gffcl	locus	53312061	53316725	.	+	.	ID=RLOC_00007987;geneIDs=FBgn0036372.1.path1;transcripts=FBgn0036372.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53312061	53316725	.	+	.	ID=FBgn0036372.1.mrna1;geneID=FBgn0036372.1.path1;Name=FBgn0036372.1;Dir=sensecoverage=100.0;identity=99.5;matches=1653;mismatches=9;indels=0;unknowns=0;locus=RLOC_00007987
Chr1	stalkie_big_nohaplotig	exon	53312061	53312152	100	+	.	Parent=FBgn0036372.1.mrna1;Target=FBgn0036372.1 1 92 +
Chr1	stalkie_big_nohaplotig	exon	53312671	53312842	98	+	.	Parent=FBgn0036372.1.mrna1;Target=FBgn0036372.1 93 264 +
Chr1	stalkie_big_nohaplotig	exon	53313711	53314162	99	+	.	Parent=FBgn0036372.1.mrna1;Target=FBgn0036372.1 265 716 +
Chr1	stalkie_big_nohaplotig	exon	53314226	53314402	99	+	.	Parent=FBgn0036372.1.mrna1;Target=FBgn0036372.1 717 893 +
Chr1	stalkie_big_nohaplotig	exon	53314472	53315010	99	+	.	Parent=FBgn0036372.1.mrna1;Target=FBgn0036372.1 894 1432 +
Chr1	stalkie_big_nohaplotig	exon	53316435	53316527	100	+	.	Parent=FBgn0036372.1.mrna1;Target=FBgn0036372.1 1433 1525 +
Chr1	stalkie_big_nohaplotig	exon	53316589	53316725	99	+	.	Parent=FBgn0036372.1.mrna1;Target=FBgn0036372.1 1526 1662 +
Chr1	stalkie_big_nohaplotig	CDS	53312061	53312152	.	+	0	Parent=FBgn0036372.1.mrna1;Target=FBgn0036372.1 1 92 +
Chr1	stalkie_big_nohaplotig	CDS	53312671	53312842	.	+	1	Parent=FBgn0036372.1.mrna1;Target=FBgn0036372.1 93 264 +
Chr1	stalkie_big_nohaplotig	CDS	53313711	53314162	.	+	0	Parent=FBgn0036372.1.mrna1;Target=FBgn0036372.1 265 716 +
Chr1	stalkie_big_nohaplotig	CDS	53314226	53314402	.	+	1	Parent=FBgn0036372.1.mrna1;Target=FBgn0036372.1 717 893 +
Chr1	stalkie_big_nohaplotig	CDS	53314472	53315010	.	+	1	Parent=FBgn0036372.1.mrna1;Target=FBgn0036372.1 894 1432 +
Chr1	stalkie_big_nohaplotig	CDS	53316435	53316527	.	+	2	Parent=FBgn0036372.1.mrna1;Target=FBgn0036372.1 1433 1525 +
Chr1	stalkie_big_nohaplotig	CDS	53316589	53316725	.	+	2	Parent=FBgn0036372.1.mrna1;Target=FBgn0036372.1 1526 1662 +
Chr1	gffcl	locus	53316980	53317339	.	-	.	ID=RLOC_00007988;geneIDs=comp156059_c2_seq1.path1;transcripts=comp156059_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53316980	53317339	.	-	.	ID=comp156059_c2_seq1.mrna1;geneID=comp156059_c2_seq1.path1;Name=comp156059_c2_seq1;Dir=indeterminatecoverage=36.4;identity=99.7;matches=359;mismatches=1;indels=0;unknowns=0;Target=comp156059_c2_seq1 361 2 .;CDS_Target=comp156059_c2_seq1 361 302 .;locus=RLOC_00007988
Chr1	stalkie_big_nohaplotig	exon	53316980	53317339	99	-	.	Parent=comp156059_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	53316980	53317039	.	-	0	Parent=comp156059_c2_seq1.mrna1
Chr1	gffcl	locus	53385267	53415655	.	-	.	ID=RLOC_00007990;geneIDs=comp112490_c0_seq1.path1;transcripts=comp112490_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53385267	53415655	.	-	.	ID=comp112490_c0_seq1.mrna1;geneID=comp112490_c0_seq1.path1;Name=comp112490_c0_seq1;Dir=indeterminatecoverage=75.5;identity=95.6;matches=174;mismatches=4;indels=4;unknowns=0;Target=comp112490_c0_seq1 79 2 .;locus=RLOC_00007990
Chr1	stalkie_big_nohaplotig	exon	53385267	53385268	100	-	.	Parent=comp112490_c0_seq1.mrna1;Target=comp112490_c0_seq1 182 181 .
Chr1	stalkie_big_nohaplotig	exon	53390917	53390919	100	-	.	Parent=comp112490_c0_seq1.mrna1;Target=comp112490_c0_seq1 180 178 .
Chr1	stalkie_big_nohaplotig	exon	53394149	53394150	100	-	.	Parent=comp112490_c0_seq1.mrna1;Target=comp112490_c0_seq1 177 176 .
Chr1	stalkie_big_nohaplotig	exon	53398233	53398236	100	-	.	Parent=comp112490_c0_seq1.mrna1;Target=comp112490_c0_seq1 175 172 .
Chr1	stalkie_big_nohaplotig	exon	53405841	53405856	60	-	.	Parent=comp112490_c0_seq1.mrna1;Target=comp112490_c0_seq1 171 152 .
Chr1	stalkie_big_nohaplotig	exon	53415505	53415655	100	-	.	Parent=comp112490_c0_seq1.mrna1;Target=comp112490_c0_seq1 151 1 .
Chr1	stalkie_big_nohaplotig	CDS	53415577	53415654	.	-	0	Parent=comp112490_c0_seq1.mrna1
Chr1	gffcl	locus	53406080	53411389	.	+	.	ID=RLOC_00007991;geneIDs=FBgn0036369.1.path1;transcripts=FBgn0036369.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53406080	53411389	.	+	.	ID=FBgn0036369.1.mrna1;geneID=FBgn0036369.1.path1;Name=FBgn0036369.1;Dir=sensecoverage=100.0;identity=99.1;matches=1356;mismatches=12;indels=0;unknowns=0;locus=RLOC_00007991
Chr1	stalkie_big_nohaplotig	exon	53406080	53406106	100	+	.	Parent=FBgn0036369.1.mrna1;Target=FBgn0036369.1 1 27 +
Chr1	stalkie_big_nohaplotig	exon	53406833	53406949	98	+	.	Parent=FBgn0036369.1.mrna1;Target=FBgn0036369.1 28 144 +
Chr1	stalkie_big_nohaplotig	exon	53407015	53407465	99	+	.	Parent=FBgn0036369.1.mrna1;Target=FBgn0036369.1 145 595 +
Chr1	stalkie_big_nohaplotig	exon	53408380	53409124	99	+	.	Parent=FBgn0036369.1.mrna1;Target=FBgn0036369.1 596 1340 +
Chr1	stalkie_big_nohaplotig	exon	53411362	53411389	92	+	.	Parent=FBgn0036369.1.mrna1;Target=FBgn0036369.1 1341 1368 +
Chr1	stalkie_big_nohaplotig	CDS	53406080	53406106	.	+	0	Parent=FBgn0036369.1.mrna1;Target=FBgn0036369.1 1 27 +
Chr1	stalkie_big_nohaplotig	CDS	53406833	53406949	.	+	0	Parent=FBgn0036369.1.mrna1;Target=FBgn0036369.1 28 144 +
Chr1	stalkie_big_nohaplotig	CDS	53407015	53407465	.	+	0	Parent=FBgn0036369.1.mrna1;Target=FBgn0036369.1 145 595 +
Chr1	stalkie_big_nohaplotig	CDS	53408380	53409124	.	+	2	Parent=FBgn0036369.1.mrna1;Target=FBgn0036369.1 596 1340 +
Chr1	stalkie_big_nohaplotig	CDS	53411362	53411389	.	+	1	Parent=FBgn0036369.1.mrna1;Target=FBgn0036369.1 1341 1368 +
Chr1	gffcl	locus	53437368	53437962	.	+	.	ID=RLOC_00007993;geneIDs=comp153934_c0_seq1.path1;transcripts=comp153934_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53437368	53437962	.	+	.	ID=comp153934_c0_seq1.mrna1;geneID=comp153934_c0_seq1.path1;Name=comp153934_c0_seq1;Dir=sensecoverage=99.5;identity=98.4;matches=423;mismatches=4;indels=3;unknowns=0;locus=RLOC_00007993
Chr1	stalkie_big_nohaplotig	exon	53437368	53437451	97	+	.	Parent=comp153934_c0_seq1.mrna1;Target=comp153934_c0_seq1 2 87 +
Chr1	stalkie_big_nohaplotig	exon	53437535	53437656	99	+	.	Parent=comp153934_c0_seq1.mrna1;Target=comp153934_c0_seq1 88 209 +
Chr1	stalkie_big_nohaplotig	exon	53437742	53437962	98	+	.	Parent=comp153934_c0_seq1.mrna1;Target=comp153934_c0_seq1 210 431 +
Chr1	stalkie_big_nohaplotig	CDS	53437545	53437656	.	+	0	Parent=comp153934_c0_seq1.mrna1;Target=comp153934_c0_seq1 98 209 +
Chr1	stalkie_big_nohaplotig	CDS	53437742	53437779	.	+	2	Parent=comp153934_c0_seq1.mrna1;Target=comp153934_c0_seq1 210 247 +
Chr1	gffcl	locus	53469617	53469962	.	+	.	ID=RLOC_00007994;geneIDs=comp140213_c0_seq1.path1;transcripts=comp140213_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53469617	53469962	.	+	.	ID=comp140213_c0_seq1.mrna1;geneID=comp140213_c0_seq1.path1;Name=comp140213_c0_seq1;Dir=sensecoverage=99.0;identity=99.7;matches=288;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007994
Chr1	stalkie_big_nohaplotig	exon	53469617	53469700	98	+	.	Parent=comp140213_c0_seq1.mrna1;Target=comp140213_c0_seq1 3 86 +
Chr1	stalkie_big_nohaplotig	exon	53469758	53469962	100	+	.	Parent=comp140213_c0_seq1.mrna1;Target=comp140213_c0_seq1 87 291 +
Chr1	stalkie_big_nohaplotig	CDS	53469661	53469700	.	+	0	Parent=comp140213_c0_seq1.mrna1;Target=comp140213_c0_seq1 47 86 +
Chr1	stalkie_big_nohaplotig	CDS	53469758	53469960	.	+	2	Parent=comp140213_c0_seq1.mrna1;Target=comp140213_c0_seq1 87 289 +
Chr1	gffcl	locus	53470098	53470472	.	+	.	ID=RLOC_00007995;geneIDs=comp141983_c1_seq1.path1;transcripts=comp141983_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53470098	53470472	.	+	.	ID=comp141983_c1_seq1.mrna1;geneID=comp141983_c1_seq1.path1;Name=comp141983_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=375;mismatches=0;indels=0;unknowns=0;Target=comp141983_c1_seq1 375 1 .;CDS_Target=comp141983_c1_seq1 373 2 .;locus=RLOC_00007995
Chr1	stalkie_big_nohaplotig	exon	53470098	53470472	100	+	.	Parent=comp141983_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	53470099	53470470	.	+	0	Parent=comp141983_c1_seq1.mrna1
Chr1	gffcl	locus	53475928	53477071	.	-	.	ID=RLOC_00007996;geneIDs=FBgn0036367.1.path1;transcripts=FBgn0036367.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53475928	53477071	.	-	.	ID=FBgn0036367.1.mrna1;geneID=FBgn0036367.1.path1;Name=FBgn0036367.1;Dir=sensecoverage=100.0;identity=99.1;matches=1008;mismatches=9;indels=0;unknowns=0;locus=RLOC_00007996
Chr1	stalkie_big_nohaplotig	exon	53475928	53476651	99	-	.	Parent=FBgn0036367.1.mrna1;Target=FBgn0036367.1 294 1017 +
Chr1	stalkie_big_nohaplotig	exon	53476715	53476940	99	-	.	Parent=FBgn0036367.1.mrna1;Target=FBgn0036367.1 68 293 +
Chr1	stalkie_big_nohaplotig	exon	53477005	53477071	98	-	.	Parent=FBgn0036367.1.mrna1;Target=FBgn0036367.1 1 67 +
Chr1	stalkie_big_nohaplotig	CDS	53475928	53476651	.	-	1	Parent=FBgn0036367.1.mrna1;Target=FBgn0036367.1 294 1017 +
Chr1	stalkie_big_nohaplotig	CDS	53476715	53476940	.	-	2	Parent=FBgn0036367.1.mrna1;Target=FBgn0036367.1 68 293 +
Chr1	stalkie_big_nohaplotig	CDS	53477005	53477071	.	-	0	Parent=FBgn0036367.1.mrna1;Target=FBgn0036367.1 1 67 +
Chr1	gffcl	locus	53548551	53550661	.	-	.	ID=RLOC_00007997;geneIDs=comp146011_c0_seq1.path1;transcripts=comp146011_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53548551	53550661	.	-	.	ID=comp146011_c0_seq1.mrna1;geneID=comp146011_c0_seq1.path1;Name=comp146011_c0_seq1;Dir=antisensecoverage=99.1;identity=99.2;matches=790;mismatches=6;indels=0;unknowns=0;locus=RLOC_00007997
Chr1	stalkie_big_nohaplotig	exon	53548551	53548772	98	-	.	Parent=comp146011_c0_seq1.mrna1;Target=comp146011_c0_seq1 2 223 -
Chr1	stalkie_big_nohaplotig	exon	53548825	53549095	99	-	.	Parent=comp146011_c0_seq1.mrna1;Target=comp146011_c0_seq1 224 494 -
Chr1	stalkie_big_nohaplotig	exon	53550359	53550661	99	-	.	Parent=comp146011_c0_seq1.mrna1;Target=comp146011_c0_seq1 495 797 -
Chr1	stalkie_big_nohaplotig	CDS	53548923	53549095	.	-	2	Parent=comp146011_c0_seq1.mrna1;Target=comp146011_c0_seq1 322 494 .
Chr1	stalkie_big_nohaplotig	CDS	53550359	53550518	.	-	0	Parent=comp146011_c0_seq1.mrna1;Target=comp146011_c0_seq1 495 654 .
Chr1	gffcl	locus	53553404	53558458	.	-	.	ID=RLOC_00007998;geneIDs=FBgn0037483.1.path1;transcripts=FBgn0037483.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53553404	53558458	.	-	.	ID=FBgn0037483.1.mrna1;geneID=FBgn0037483.1.path1;Name=FBgn0037483.1;Dir=sensecoverage=100.0;identity=99.9;matches=1766;mismatches=1;indels=0;unknowns=0;locus=RLOC_00007998
Chr1	stalkie_big_nohaplotig	exon	53553404	53553696	100	-	.	Parent=FBgn0037483.1.mrna1;Target=FBgn0037483.1 1475 1767 +
Chr1	stalkie_big_nohaplotig	exon	53553821	53554089	100	-	.	Parent=FBgn0037483.1.mrna1;Target=FBgn0037483.1 1206 1474 +
Chr1	stalkie_big_nohaplotig	exon	53554155	53554301	99	-	.	Parent=FBgn0037483.1.mrna1;Target=FBgn0037483.1 1059 1205 +
Chr1	stalkie_big_nohaplotig	exon	53556600	53556856	100	-	.	Parent=FBgn0037483.1.mrna1;Target=FBgn0037483.1 802 1058 +
Chr1	stalkie_big_nohaplotig	exon	53556921	53557226	100	-	.	Parent=FBgn0037483.1.mrna1;Target=FBgn0037483.1 496 801 +
Chr1	stalkie_big_nohaplotig	exon	53557293	53557597	100	-	.	Parent=FBgn0037483.1.mrna1;Target=FBgn0037483.1 191 495 +
Chr1	stalkie_big_nohaplotig	exon	53558269	53558458	100	-	.	Parent=FBgn0037483.1.mrna1;Target=FBgn0037483.1 1 190 +
Chr1	stalkie_big_nohaplotig	CDS	53553404	53553696	.	-	2	Parent=FBgn0037483.1.mrna1;Target=FBgn0037483.1 1475 1767 +
Chr1	stalkie_big_nohaplotig	CDS	53553821	53554089	.	-	1	Parent=FBgn0037483.1.mrna1;Target=FBgn0037483.1 1206 1474 +
Chr1	stalkie_big_nohaplotig	CDS	53554155	53554301	.	-	1	Parent=FBgn0037483.1.mrna1;Target=FBgn0037483.1 1059 1205 +
Chr1	stalkie_big_nohaplotig	CDS	53556600	53556856	.	-	0	Parent=FBgn0037483.1.mrna1;Target=FBgn0037483.1 802 1058 +
Chr1	stalkie_big_nohaplotig	CDS	53556921	53557226	.	-	0	Parent=FBgn0037483.1.mrna1;Target=FBgn0037483.1 496 801 +
Chr1	stalkie_big_nohaplotig	CDS	53557293	53557597	.	-	2	Parent=FBgn0037483.1.mrna1;Target=FBgn0037483.1 191 495 +
Chr1	stalkie_big_nohaplotig	CDS	53558269	53558458	.	-	0	Parent=FBgn0037483.1.mrna1;Target=FBgn0037483.1 1 190 +
Chr1	gffcl	locus	53555771	53556622	.	+	.	ID=RLOC_00007999;geneIDs=comp136868_c0_seq1.path1;transcripts=comp136868_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53555771	53556622	.	+	.	ID=comp136868_c0_seq1.mrna1;geneID=comp136868_c0_seq1.path1;Name=comp136868_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=846;mismatches=0;indels=0;unknowns=0;locus=RLOC_00007999
Chr1	stalkie_big_nohaplotig	exon	53555771	53556302	100	+	.	Parent=comp136868_c0_seq1.mrna1;Target=comp136868_c0_seq1 532 1 .
Chr1	stalkie_big_nohaplotig	exon	53556309	53556622	100	+	.	Parent=comp136868_c0_seq1.mrna1;Target=comp136868_c0_seq1 891 578 .
Chr1	stalkie_big_nohaplotig	CDS	53556207	53556302	.	+	0	Parent=comp136868_c0_seq1.mrna1;Target=comp136868_c0_seq1 532 437 .
Chr1	stalkie_big_nohaplotig	CDS	53556309	53556434	.	+	0	Parent=comp136868_c0_seq1.mrna1;Target=comp136868_c0_seq1 703 578 .
Chr1	gffcl	locus	53572289	53574751	.	+	.	ID=RLOC_00008000;geneIDs=FBgn0036450.1.path1;transcripts=FBgn0036450.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53572289	53574751	.	+	.	ID=FBgn0036450.1.mrna1;geneID=FBgn0036450.1.path1;Name=FBgn0036450.1;Dir=sensecoverage=100.0;identity=99.7;matches=2081;mismatches=6;indels=1;unknowns=0;locus=RLOC_00008000
Chr1	stalkie_big_nohaplotig	exon	53572289	53572301	100	+	.	Parent=FBgn0036450.1.mrna1;Target=FBgn0036450.1 1 13 +
Chr1	stalkie_big_nohaplotig	exon	53572366	53572447	100	+	.	Parent=FBgn0036450.1.mrna1;Target=FBgn0036450.1 14 95 +
Chr1	stalkie_big_nohaplotig	exon	53572505	53573101	99	+	.	Parent=FBgn0036450.1.mrna1;Target=FBgn0036450.1 96 693 +
Chr1	stalkie_big_nohaplotig	exon	53573170	53573499	99	+	.	Parent=FBgn0036450.1.mrna1;Target=FBgn0036450.1 694 1023 +
Chr1	stalkie_big_nohaplotig	exon	53573623	53574279	99	+	.	Parent=FBgn0036450.1.mrna1;Target=FBgn0036450.1 1024 1680 +
Chr1	stalkie_big_nohaplotig	exon	53574344	53574751	99	+	.	Parent=FBgn0036450.1.mrna1;Target=FBgn0036450.1 1681 2088 +
Chr1	stalkie_big_nohaplotig	CDS	53572291	53572301	.	+	0	Parent=FBgn0036450.1.mrna1;Target=FBgn0036450.1 3 13 +
Chr1	stalkie_big_nohaplotig	CDS	53572366	53572447	.	+	1	Parent=FBgn0036450.1.mrna1;Target=FBgn0036450.1 14 95 +
Chr1	stalkie_big_nohaplotig	CDS	53572505	53572632	.	+	0	Parent=FBgn0036450.1.mrna1;Target=FBgn0036450.1 96 224 +
Chr1	gffcl	locus	53581885	53625553	.	+	.	ID=RLOC_00008001;geneIDs=FBgn0036449.1.path1;transcripts=FBgn0036449.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53581885	53625553	.	+	.	ID=FBgn0036449.1.mrna1;geneID=FBgn0036449.1.path1;Name=FBgn0036449.1;Dir=sensecoverage=100.0;identity=99.7;matches=1768;mismatches=5;indels=0;unknowns=0;locus=RLOC_00008001
Chr1	stalkie_big_nohaplotig	exon	53581885	53582053	99	+	.	Parent=FBgn0036449.1.mrna1;Target=FBgn0036449.1 1 169 +
Chr1	stalkie_big_nohaplotig	exon	53612745	53613427	99	+	.	Parent=FBgn0036449.1.mrna1;Target=FBgn0036449.1 170 852 +
Chr1	stalkie_big_nohaplotig	exon	53613505	53613671	100	+	.	Parent=FBgn0036449.1.mrna1;Target=FBgn0036449.1 853 1019 +
Chr1	stalkie_big_nohaplotig	exon	53623669	53623777	100	+	.	Parent=FBgn0036449.1.mrna1;Target=FBgn0036449.1 1020 1128 +
Chr1	stalkie_big_nohaplotig	exon	53623843	53623931	100	+	.	Parent=FBgn0036449.1.mrna1;Target=FBgn0036449.1 1129 1217 +
Chr1	stalkie_big_nohaplotig	exon	53623997	53624108	100	+	.	Parent=FBgn0036449.1.mrna1;Target=FBgn0036449.1 1218 1329 +
Chr1	stalkie_big_nohaplotig	exon	53624167	53624314	99	+	.	Parent=FBgn0036449.1.mrna1;Target=FBgn0036449.1 1330 1477 +
Chr1	stalkie_big_nohaplotig	exon	53625258	53625553	99	+	.	Parent=FBgn0036449.1.mrna1;Target=FBgn0036449.1 1478 1773 +
Chr1	stalkie_big_nohaplotig	CDS	53581885	53582053	.	+	0	Parent=FBgn0036449.1.mrna1;Target=FBgn0036449.1 1 169 +
Chr1	stalkie_big_nohaplotig	CDS	53612745	53613427	.	+	2	Parent=FBgn0036449.1.mrna1;Target=FBgn0036449.1 170 852 +
Chr1	stalkie_big_nohaplotig	CDS	53613505	53613671	.	+	0	Parent=FBgn0036449.1.mrna1;Target=FBgn0036449.1 853 1019 +
Chr1	stalkie_big_nohaplotig	CDS	53623669	53623777	.	+	1	Parent=FBgn0036449.1.mrna1;Target=FBgn0036449.1 1020 1128 +
Chr1	stalkie_big_nohaplotig	CDS	53623843	53623931	.	+	0	Parent=FBgn0036449.1.mrna1;Target=FBgn0036449.1 1129 1217 +
Chr1	stalkie_big_nohaplotig	CDS	53623997	53624108	.	+	1	Parent=FBgn0036449.1.mrna1;Target=FBgn0036449.1 1218 1329 +
Chr1	stalkie_big_nohaplotig	CDS	53624167	53624314	.	+	0	Parent=FBgn0036449.1.mrna1;Target=FBgn0036449.1 1330 1477 +
Chr1	stalkie_big_nohaplotig	CDS	53625258	53625553	.	+	2	Parent=FBgn0036449.1.mrna1;Target=FBgn0036449.1 1478 1773 +
Chr1	gffcl	locus	53627776	53628692	.	+	.	ID=RLOC_00008002;geneIDs=comp140468_c0_seq1.path1,comp150903_c0_seq1.path1;transcripts=comp150903_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53627776	53628415	.	+	.	ID=comp150903_c0_seq1.mrna1;geneID=comp150903_c0_seq1.path1;Name=comp150903_c0_seq1;Dir=sensecoverage=100.0;identity=99.1;matches=426;mismatches=2;indels=2;unknowns=0;locus=RLOC_00008002
Chr1	stalkie_big_nohaplotig	exon	53627776	53627906	97	+	.	Parent=comp150903_c0_seq1.mrna1;Target=comp150903_c0_seq1 1 132 +
Chr1	stalkie_big_nohaplotig	exon	53627976	53628093	100	+	.	Parent=comp150903_c0_seq1.mrna1;Target=comp150903_c0_seq1 133 250 +
Chr1	stalkie_big_nohaplotig	exon	53628237	53628415	99	+	.	Parent=comp150903_c0_seq1.mrna1;Target=comp150903_c0_seq1 251 430 +
Chr1	stalkie_big_nohaplotig	CDS	53627982	53628093	.	+	0	Parent=comp150903_c0_seq1.mrna1;Target=comp150903_c0_seq1 139 250 +
Chr1	stalkie_big_nohaplotig	CDS	53628237	53628271	.	+	2	Parent=comp150903_c0_seq1.mrna1;Target=comp150903_c0_seq1 251 285 +
Chr1	gffcl	locus	53630514	53630991	.	+	.	ID=RLOC_00008003;geneIDs=comp154882_c0_seq1.path1;transcripts=comp154882_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53630514	53630991	.	+	.	ID=comp154882_c0_seq1.mrna1;geneID=comp154882_c0_seq1.path1;Name=comp154882_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=477;mismatches=1;indels=1;unknowns=0;Target=comp154882_c0_seq1 479 1 .;CDS_Target=comp154882_c0_seq1 28 2 .;locus=RLOC_00008003
Chr1	stalkie_big_nohaplotig	exon	53630514	53630991	99	+	.	Parent=comp154882_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	53630515	53630541	.	+	0	Parent=comp154882_c0_seq1.mrna1
Chr1	gffcl	locus	53631005	53651982	.	+	.	ID=RLOC_00008004;geneIDs=FBgn0026418.1.path1;transcripts=FBgn0026418.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53631005	53651982	.	+	.	ID=FBgn0026418.1.mrna1;geneID=FBgn0026418.1.path1;Name=FBgn0026418.1;Dir=sensecoverage=100.0;identity=99.7;matches=2515;mismatches=8;indels=0;unknowns=0;locus=RLOC_00008004
Chr1	stalkie_big_nohaplotig	exon	53631005	53631126	100	+	.	Parent=FBgn0026418.1.mrna1;Target=FBgn0026418.1 1 122 +
Chr1	stalkie_big_nohaplotig	exon	53645181	53645481	100	+	.	Parent=FBgn0026418.1.mrna1;Target=FBgn0026418.1 123 423 +
Chr1	stalkie_big_nohaplotig	exon	53645548	53646192	99	+	.	Parent=FBgn0026418.1.mrna1;Target=FBgn0026418.1 424 1068 +
Chr1	stalkie_big_nohaplotig	exon	53646258	53646821	99	+	.	Parent=FBgn0026418.1.mrna1;Target=FBgn0026418.1 1069 1632 +
Chr1	stalkie_big_nohaplotig	exon	53648780	53648875	100	+	.	Parent=FBgn0026418.1.mrna1;Target=FBgn0026418.1 1633 1728 +
Chr1	stalkie_big_nohaplotig	exon	53649346	53649546	100	+	.	Parent=FBgn0026418.1.mrna1;Target=FBgn0026418.1 1729 1929 +
Chr1	stalkie_big_nohaplotig	exon	53651389	53651982	99	+	.	Parent=FBgn0026418.1.mrna1;Target=FBgn0026418.1 1930 2523 +
Chr1	stalkie_big_nohaplotig	CDS	53631005	53631126	.	+	0	Parent=FBgn0026418.1.mrna1;Target=FBgn0026418.1 1 122 +
Chr1	stalkie_big_nohaplotig	CDS	53645181	53645481	.	+	1	Parent=FBgn0026418.1.mrna1;Target=FBgn0026418.1 123 423 +
Chr1	stalkie_big_nohaplotig	CDS	53645548	53646192	.	+	0	Parent=FBgn0026418.1.mrna1;Target=FBgn0026418.1 424 1068 +
Chr1	stalkie_big_nohaplotig	CDS	53646258	53646821	.	+	0	Parent=FBgn0026418.1.mrna1;Target=FBgn0026418.1 1069 1632 +
Chr1	stalkie_big_nohaplotig	CDS	53648780	53648875	.	+	0	Parent=FBgn0026418.1.mrna1;Target=FBgn0026418.1 1633 1728 +
Chr1	stalkie_big_nohaplotig	CDS	53649346	53649546	.	+	0	Parent=FBgn0026418.1.mrna1;Target=FBgn0026418.1 1729 1929 +
Chr1	stalkie_big_nohaplotig	CDS	53651389	53651982	.	+	0	Parent=FBgn0026418.1.mrna1;Target=FBgn0026418.1 1930 2523 +
Chr1	gffcl	locus	53660938	54507249	.	-	.	ID=RLOC_00008005;geneIDs=FBgn0001114.1.path1,FBgn0064119.1.path1,FBgn0064119.2.path1,comp155402_c0_seq1.path1;transcripts=comp155402_c0_seq1.mrna1,FBgn0001114.1.mrna1,FBgn0064119.1.mrna1,FBgn0064119.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53660938	54507249	.	-	.	ID=comp155402_c0_seq1.mrna1;geneID=comp155402_c0_seq1.path1;Name=comp155402_c0_seq1;Dir=antisensecoverage=91.4;identity=98.4;matches=1757;mismatches=27;indels=1;unknowns=0;locus=RLOC_00008005
Chr1	stalkie_big_nohaplotig	exon	53660938	53660953	93	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 179 194 -
Chr1	stalkie_big_nohaplotig	exon	53665658	53665660	100	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 195 197 -
Chr1	stalkie_big_nohaplotig	exon	53693044	53693046	100	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 198 200 -
Chr1	stalkie_big_nohaplotig	exon	53694188	53694194	100	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 201 207 -
Chr1	stalkie_big_nohaplotig	exon	53713939	53713948	100	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 208 217 -
Chr1	stalkie_big_nohaplotig	exon	53719420	53719426	100	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 218 224 -
Chr1	stalkie_big_nohaplotig	exon	53734573	53734575	100	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 225 227 -
Chr1	stalkie_big_nohaplotig	exon	53747927	53747937	100	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 228 238 -
Chr1	stalkie_big_nohaplotig	exon	53757512	53757521	100	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 253 262 -
Chr1	stalkie_big_nohaplotig	exon	53759214	53759234	77	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 263 284 -
Chr1	stalkie_big_nohaplotig	exon	53782661	53782674	92	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 285 298 -
Chr1	stalkie_big_nohaplotig	exon	54492050	54492051	100	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 299 300 -
Chr1	stalkie_big_nohaplotig	exon	54497032	54497040	100	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 301 309 -
Chr1	stalkie_big_nohaplotig	exon	54503242	54503250	100	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 324 332 -
Chr1	stalkie_big_nohaplotig	exon	54503669	54503715	82	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 340 386 -
Chr1	stalkie_big_nohaplotig	exon	54503855	54503954	88	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 458 557 -
Chr1	stalkie_big_nohaplotig	exon	54504020	54504213	100	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 558 751 -
Chr1	stalkie_big_nohaplotig	exon	54504466	54504555	98	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 752 841 -
Chr1	stalkie_big_nohaplotig	exon	54504616	54504710	100	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 842 936 -
Chr1	stalkie_big_nohaplotig	exon	54504776	54505108	100	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 937 1269 -
Chr1	stalkie_big_nohaplotig	exon	54506070	54506192	100	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 1270 1392 -
Chr1	stalkie_big_nohaplotig	exon	54506255	54506313	100	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 1393 1451 -
Chr1	stalkie_big_nohaplotig	exon	54506371	54506485	100	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 1452 1566 -
Chr1	stalkie_big_nohaplotig	exon	54506572	54506720	100	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 1567 1715 -
Chr1	stalkie_big_nohaplotig	exon	54506781	54506897	100	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 1716 1832 -
Chr1	stalkie_big_nohaplotig	exon	54506954	54507074	100	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 1833 1953 -
Chr1	stalkie_big_nohaplotig	exon	54507135	54507249	100	-	.	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 1954 2068 -
Chr1	stalkie_big_nohaplotig	CDS	54497034	54497040	.	-	0	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 303 309 .
Chr1	stalkie_big_nohaplotig	CDS	54503242	54503250	.	-	0	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 324 332 .
Chr1	stalkie_big_nohaplotig	CDS	54503669	54503715	.	-	2	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 340 386 .
Chr1	stalkie_big_nohaplotig	CDS	54503855	54503954	.	-	0	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 458 557 .
Chr1	stalkie_big_nohaplotig	CDS	54504020	54504213	.	-	2	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 558 751 .
Chr1	stalkie_big_nohaplotig	CDS	54504466	54504555	.	-	2	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 752 841 .
Chr1	stalkie_big_nohaplotig	CDS	54504616	54504710	.	-	1	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 842 936 .
Chr1	stalkie_big_nohaplotig	CDS	54504776	54505108	.	-	1	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 937 1269 .
Chr1	stalkie_big_nohaplotig	CDS	54506070	54506192	.	-	1	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 1270 1392 .
Chr1	stalkie_big_nohaplotig	CDS	54506255	54506313	.	-	0	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 1393 1451 .
Chr1	stalkie_big_nohaplotig	CDS	54506371	54506485	.	-	1	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 1452 1566 .
Chr1	stalkie_big_nohaplotig	CDS	54506572	54506720	.	-	0	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 1567 1715 .
Chr1	stalkie_big_nohaplotig	CDS	54506781	54506897	.	-	0	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 1716 1832 .
Chr1	stalkie_big_nohaplotig	CDS	54506954	54507074	.	-	1	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 1833 1953 .
Chr1	stalkie_big_nohaplotig	CDS	54507135	54507142	.	-	0	Parent=comp155402_c0_seq1.mrna1;Target=comp155402_c0_seq1 1954 1961 .
Chr1	stalkie_big_nohaplotig	mRNA	53686538	53693175	.	-	.	ID=FBgn0001114.1.mrna1;geneID=FBgn0001114.1.path1;Name=FBgn0001114.1;Dir=sensecoverage=100.0;identity=98.6;matches=1996;mismatches=29;indels=0;unknowns=0;locus=RLOC_00008005
Chr1	stalkie_big_nohaplotig	exon	53686538	53687161	97	-	.	Parent=FBgn0001114.1.mrna1;Target=FBgn0001114.1 1402 2025 +
Chr1	stalkie_big_nohaplotig	exon	53687214	53687398	97	-	.	Parent=FBgn0001114.1.mrna1;Target=FBgn0001114.1 1217 1401 +
Chr1	stalkie_big_nohaplotig	exon	53687465	53687627	99	-	.	Parent=FBgn0001114.1.mrna1;Target=FBgn0001114.1 1054 1216 +
Chr1	stalkie_big_nohaplotig	exon	53687700	53687909	99	-	.	Parent=FBgn0001114.1.mrna1;Target=FBgn0001114.1 844 1053 +
Chr1	stalkie_big_nohaplotig	exon	53687979	53688296	99	-	.	Parent=FBgn0001114.1.mrna1;Target=FBgn0001114.1 526 843 +
Chr1	stalkie_big_nohaplotig	exon	53688351	53688509	98	-	.	Parent=FBgn0001114.1.mrna1;Target=FBgn0001114.1 367 525 +
Chr1	stalkie_big_nohaplotig	exon	53692810	53693175	98	-	.	Parent=FBgn0001114.1.mrna1;Target=FBgn0001114.1 1 366 +
Chr1	stalkie_big_nohaplotig	CDS	53686538	53687161	.	-	0	Parent=FBgn0001114.1.mrna1;Target=FBgn0001114.1 1402 2025 +
Chr1	stalkie_big_nohaplotig	CDS	53687214	53687398	.	-	2	Parent=FBgn0001114.1.mrna1;Target=FBgn0001114.1 1217 1401 +
Chr1	stalkie_big_nohaplotig	CDS	53687465	53687627	.	-	0	Parent=FBgn0001114.1.mrna1;Target=FBgn0001114.1 1054 1216 +
Chr1	stalkie_big_nohaplotig	CDS	53687700	53687909	.	-	0	Parent=FBgn0001114.1.mrna1;Target=FBgn0001114.1 844 1053 +
Chr1	stalkie_big_nohaplotig	CDS	53687979	53688296	.	-	0	Parent=FBgn0001114.1.mrna1;Target=FBgn0001114.1 526 843 +
Chr1	stalkie_big_nohaplotig	CDS	53688351	53688509	.	-	0	Parent=FBgn0001114.1.mrna1;Target=FBgn0001114.1 367 525 +
Chr1	stalkie_big_nohaplotig	CDS	53692810	53693175	.	-	0	Parent=FBgn0001114.1.mrna1;Target=FBgn0001114.1 1 366 +
Chr1	stalkie_big_nohaplotig	mRNA	54503817	54507154	.	-	.	ID=FBgn0064119.1.mrna1;geneID=FBgn0064119.1.path1;Name=FBgn0064119.1;Dir=sensecoverage=93.2;identity=98.8;matches=1536;mismatches=18;indels=0;unknowns=0;locus=RLOC_00008005
Chr1	stalkie_big_nohaplotig	exon	54503817	54503954	87	-	.	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 1417 1554 +
Chr1	stalkie_big_nohaplotig	exon	54504020	54504213	100	-	.	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 1223 1416 +
Chr1	stalkie_big_nohaplotig	exon	54504466	54504555	98	-	.	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 1133 1222 +
Chr1	stalkie_big_nohaplotig	exon	54504616	54504710	100	-	.	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 1038 1132 +
Chr1	stalkie_big_nohaplotig	exon	54504776	54505108	100	-	.	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 705 1037 +
Chr1	stalkie_big_nohaplotig	exon	54506070	54506192	100	-	.	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 582 704 +
Chr1	stalkie_big_nohaplotig	exon	54506255	54506313	100	-	.	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 523 581 +
Chr1	stalkie_big_nohaplotig	exon	54506371	54506485	100	-	.	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 408 522 +
Chr1	stalkie_big_nohaplotig	exon	54506572	54506720	100	-	.	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 259 407 +
Chr1	stalkie_big_nohaplotig	exon	54506781	54506897	100	-	.	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 142 258 +
Chr1	stalkie_big_nohaplotig	exon	54506954	54507074	100	-	.	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 21 141 +
Chr1	stalkie_big_nohaplotig	exon	54507135	54507154	100	-	.	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 1 20 +
Chr1	stalkie_big_nohaplotig	CDS	54503817	54503954	.	-	0	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 1417 1554 +
Chr1	stalkie_big_nohaplotig	CDS	54504020	54504213	.	-	2	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 1223 1416 +
Chr1	stalkie_big_nohaplotig	CDS	54504466	54504555	.	-	2	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 1133 1222 +
Chr1	stalkie_big_nohaplotig	CDS	54504616	54504710	.	-	1	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 1038 1132 +
Chr1	stalkie_big_nohaplotig	CDS	54504776	54505108	.	-	1	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 705 1037 +
Chr1	stalkie_big_nohaplotig	CDS	54506070	54506192	.	-	1	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 582 704 +
Chr1	stalkie_big_nohaplotig	CDS	54506255	54506313	.	-	0	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 523 581 +
Chr1	stalkie_big_nohaplotig	CDS	54506371	54506485	.	-	1	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 408 522 +
Chr1	stalkie_big_nohaplotig	CDS	54506572	54506720	.	-	0	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 259 407 +
Chr1	stalkie_big_nohaplotig	CDS	54506781	54506897	.	-	0	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 142 258 +
Chr1	stalkie_big_nohaplotig	CDS	54506954	54507074	.	-	1	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 21 141 +
Chr1	stalkie_big_nohaplotig	CDS	54507135	54507154	.	-	0	Parent=FBgn0064119.1.mrna1;Target=FBgn0064119.1 1 20 +
Chr1	stalkie_big_nohaplotig	mRNA	54503836	54506708	.	-	.	ID=FBgn0064119.2.mrna1;geneID=FBgn0064119.2.path1;Name=FBgn0064119.2;Dir=sensecoverage=75.8;identity=86.5;matches=1055;mismatches=165;indels=0;unknowns=0;locus=RLOC_00008005
Chr1	stalkie_big_nohaplotig	exon	54503836	54503954	86	-	.	Parent=FBgn0064119.2.mrna1;Target=FBgn0064119.2 1417 1535 +
Chr1	stalkie_big_nohaplotig	exon	54504020	54504213	82	-	.	Parent=FBgn0064119.2.mrna1;Target=FBgn0064119.2 1223 1416 +
Chr1	stalkie_big_nohaplotig	exon	54504466	54504555	87	-	.	Parent=FBgn0064119.2.mrna1;Target=FBgn0064119.2 1133 1222 +
Chr1	stalkie_big_nohaplotig	exon	54504616	54504664	91	-	.	Parent=FBgn0064119.2.mrna1;Target=FBgn0064119.2 1084 1132 +
Chr1	stalkie_big_nohaplotig	exon	54504775	54505108	85	-	.	Parent=FBgn0064119.2.mrna1;Target=FBgn0064119.2 705 1038 +
Chr1	stalkie_big_nohaplotig	exon	54506070	54506192	89	-	.	Parent=FBgn0064119.2.mrna1;Target=FBgn0064119.2 582 704 +
Chr1	stalkie_big_nohaplotig	exon	54506255	54506313	84	-	.	Parent=FBgn0064119.2.mrna1;Target=FBgn0064119.2 523 581 +
Chr1	stalkie_big_nohaplotig	exon	54506371	54506485	85	-	.	Parent=FBgn0064119.2.mrna1;Target=FBgn0064119.2 408 522 +
Chr1	stalkie_big_nohaplotig	exon	54506572	54506708	89	-	.	Parent=FBgn0064119.2.mrna1;Target=FBgn0064119.2 271 407 +
Chr1	stalkie_big_nohaplotig	CDS	54503838	54503954	.	-	0	Parent=FBgn0064119.2.mrna1;Target=FBgn0064119.2 1417 1533 +
Chr1	stalkie_big_nohaplotig	CDS	54504020	54504213	.	-	2	Parent=FBgn0064119.2.mrna1;Target=FBgn0064119.2 1223 1416 +
Chr1	stalkie_big_nohaplotig	CDS	54504466	54504555	.	-	2	Parent=FBgn0064119.2.mrna1;Target=FBgn0064119.2 1133 1222 +
Chr1	stalkie_big_nohaplotig	CDS	54504616	54504664	.	-	0	Parent=FBgn0064119.2.mrna1;Target=FBgn0064119.2 1084 1132 +
Chr1	stalkie_big_nohaplotig	CDS	54504775	54505108	.	-	1	Parent=FBgn0064119.2.mrna1;Target=FBgn0064119.2 705 1038 +
Chr1	stalkie_big_nohaplotig	CDS	54506070	54506192	.	-	1	Parent=FBgn0064119.2.mrna1;Target=FBgn0064119.2 582 704 +
Chr1	stalkie_big_nohaplotig	CDS	54506255	54506313	.	-	0	Parent=FBgn0064119.2.mrna1;Target=FBgn0064119.2 523 581 +
Chr1	stalkie_big_nohaplotig	CDS	54506371	54506485	.	-	1	Parent=FBgn0064119.2.mrna1;Target=FBgn0064119.2 408 522 +
Chr1	stalkie_big_nohaplotig	CDS	54506572	54506708	.	-	0	Parent=FBgn0064119.2.mrna1;Target=FBgn0064119.2 271 407 +
Chr1	gffcl	locus	53754323	53754970	.	+	.	ID=RLOC_00008007;geneIDs=FBgn0000411.path1;transcripts=FBgn0000411.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53754323	53754970	.	+	.	ID=FBgn0000411.mrna1;geneID=FBgn0000411.path1;Name=FBgn0000411;Dir=indeterminatecoverage=100.0;identity=100.0;matches=648;mismatches=0;indels=0;unknowns=0;Target=FBgn0000411 648 1 .;locus=RLOC_00008007
Chr1	stalkie_big_nohaplotig	exon	53754323	53754970	100	+	.	Parent=FBgn0000411.mrna1
Chr1	stalkie_big_nohaplotig	CDS	53754323	53754970	.	+	0	Parent=FBgn0000411.mrna1
Chr1	gffcl	locus	53963795	53964291	.	-	.	ID=RLOC_00008009;geneIDs=comp142340_c0_seq1.path1;transcripts=comp142340_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	53963795	53964291	.	-	.	ID=comp142340_c0_seq1.mrna1;geneID=comp142340_c0_seq1.path1;Name=comp142340_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=494;mismatches=3;indels=0;unknowns=0;Target=comp142340_c0_seq1 497 1 .;CDS_Target=comp142340_c0_seq1 302 75 .;locus=RLOC_00008009
Chr1	stalkie_big_nohaplotig	exon	53963795	53964291	99	-	.	Parent=comp142340_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	53963990	53964217	.	-	0	Parent=comp142340_c0_seq1.mrna1
Chr1	gffcl	locus	54069316	54077201	.	+	.	ID=RLOC_00008011;geneIDs=FBgn0036411.1.path1;transcripts=FBgn0036411.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54069316	54077201	.	+	.	ID=FBgn0036411.1.mrna1;geneID=FBgn0036411.1.path1;Name=FBgn0036411.1;Dir=sensecoverage=100.0;identity=98.6;matches=1032;mismatches=3;indels=12;unknowns=0;locus=RLOC_00008011
Chr1	stalkie_big_nohaplotig	exon	54069316	54069842	97	+	.	Parent=FBgn0036411.1.mrna1;Target=FBgn0036411.1 1 515 +
Chr1	stalkie_big_nohaplotig	exon	54076682	54077201	99	+	.	Parent=FBgn0036411.1.mrna1;Target=FBgn0036411.1 516 1035 +
Chr1	stalkie_big_nohaplotig	CDS	54069316	54069842	.	+	0	Parent=FBgn0036411.1.mrna1;Target=FBgn0036411.1 1 515 +
Chr1	stalkie_big_nohaplotig	CDS	54076682	54077201	.	+	1	Parent=FBgn0036411.1.mrna1;Target=FBgn0036411.1 516 1035 +
Chr1	gffcl	locus	54104780	54105976	.	-	.	ID=RLOC_00008012;geneIDs=FBgn0260439.2.path1;transcripts=FBgn0260439.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54104780	54105976	.	-	.	ID=FBgn0260439.2.mrna1;geneID=FBgn0260439.2.path1;Name=FBgn0260439.2;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1196;mismatches=1;indels=0;unknowns=0;Target=FBgn0260439.2 1197 1 .;locus=RLOC_00008012
Chr1	stalkie_big_nohaplotig	exon	54104780	54105976	99	-	.	Parent=FBgn0260439.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	54104780	54105976	.	-	0	Parent=FBgn0260439.2.mrna1
Chr1	gffcl	locus	54128578	54129073	.	+	.	ID=RLOC_00008013;geneIDs=comp118311_c1_seq1.path1;transcripts=comp118311_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54128578	54129073	.	+	.	ID=comp118311_c1_seq1.mrna1;geneID=comp118311_c1_seq1.path1;Name=comp118311_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=495;mismatches=1;indels=0;unknowns=0;Target=comp118311_c1_seq1 496 1 .;CDS_Target=comp118311_c1_seq1 274 209 .;locus=RLOC_00008013
Chr1	stalkie_big_nohaplotig	exon	54128578	54129073	99	+	.	Parent=comp118311_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	54128786	54128851	.	+	0	Parent=comp118311_c1_seq1.mrna1
Chr1	gffcl	locus	54131669	54133851	.	-	.	ID=RLOC_00008014;geneIDs=FBgn0000639.1.path1;transcripts=FBgn0000639.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54131669	54133851	.	-	.	ID=FBgn0000639.1.mrna1;geneID=FBgn0000639.1.path1;Name=FBgn0000639.1;Dir=sensecoverage=54.7;identity=99.4;matches=2044;mismatches=12;indels=0;unknowns=0;locus=RLOC_00008014
Chr1	stalkie_big_nohaplotig	exon	54131669	54133421	99	-	.	Parent=FBgn0000639.1.mrna1;Target=FBgn0000639.1 304 2056 +
Chr1	stalkie_big_nohaplotig	exon	54133491	54133642	100	-	.	Parent=FBgn0000639.1.mrna1;Target=FBgn0000639.1 152 303 +
Chr1	stalkie_big_nohaplotig	exon	54133701	54133851	100	-	.	Parent=FBgn0000639.1.mrna1;Target=FBgn0000639.1 1 151 +
Chr1	stalkie_big_nohaplotig	CDS	54131670	54133421	.	-	0	Parent=FBgn0000639.1.mrna1;Target=FBgn0000639.1 304 2055 +
Chr1	stalkie_big_nohaplotig	CDS	54133491	54133642	.	-	2	Parent=FBgn0000639.1.mrna1;Target=FBgn0000639.1 152 303 +
Chr1	stalkie_big_nohaplotig	CDS	54133701	54133851	.	-	0	Parent=FBgn0000639.1.mrna1;Target=FBgn0000639.1 1 151 +
Chr1	gffcl	locus	54137629	54143296	.	-	.	ID=RLOC_00008015;geneIDs=FBgn0005592.1.path1;transcripts=FBgn0005592.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54137629	54143296	.	-	.	ID=FBgn0005592.1.mrna1;geneID=FBgn0005592.1.path1;Name=FBgn0005592.1;Dir=sensecoverage=100.0;identity=99.8;matches=3351;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008015
Chr1	stalkie_big_nohaplotig	exon	54137629	54138207	100	-	.	Parent=FBgn0005592.1.mrna1;Target=FBgn0005592.1 2779 3357 +
Chr1	stalkie_big_nohaplotig	exon	54140519	54143296	99	-	.	Parent=FBgn0005592.1.mrna1;Target=FBgn0005592.1 1 2778 +
Chr1	stalkie_big_nohaplotig	CDS	54137629	54138207	.	-	0	Parent=FBgn0005592.1.mrna1;Target=FBgn0005592.1 2779 3357 +
Chr1	stalkie_big_nohaplotig	CDS	54140519	54143260	.	-	0	Parent=FBgn0005592.1.mrna1;Target=FBgn0005592.1 37 2778 +
Chr1	gffcl	locus	54154629	54159933	.	-	.	ID=RLOC_00008016;geneIDs=FBgn0013563.1.path1;transcripts=FBgn0013563.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54154629	54159933	.	-	.	ID=FBgn0013563.1.mrna1;geneID=FBgn0013563.1.path1;Name=FBgn0013563.1;Dir=sensecoverage=100.0;identity=99.9;matches=3049;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008016
Chr1	stalkie_big_nohaplotig	exon	54154629	54154695	100	-	.	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 2985 3051 +
Chr1	stalkie_big_nohaplotig	exon	54154763	54154866	100	-	.	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 2881 2984 +
Chr1	stalkie_big_nohaplotig	exon	54154985	54155408	99	-	.	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 2457 2880 +
Chr1	stalkie_big_nohaplotig	exon	54155480	54155679	100	-	.	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 2257 2456 +
Chr1	stalkie_big_nohaplotig	exon	54155744	54155940	100	-	.	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 2060 2256 +
Chr1	stalkie_big_nohaplotig	exon	54155997	54156453	100	-	.	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 1603 2059 +
Chr1	stalkie_big_nohaplotig	exon	54156540	54156655	100	-	.	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 1487 1602 +
Chr1	stalkie_big_nohaplotig	exon	54156716	54157741	100	-	.	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 461 1486 +
Chr1	stalkie_big_nohaplotig	exon	54157949	54158063	100	-	.	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 346 460 +
Chr1	stalkie_big_nohaplotig	exon	54159107	54159210	100	-	.	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 242 345 +
Chr1	stalkie_big_nohaplotig	exon	54159507	54159627	100	-	.	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 121 241 +
Chr1	stalkie_big_nohaplotig	exon	54159814	54159933	99	-	.	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 1 120 +
Chr1	stalkie_big_nohaplotig	CDS	54154629	54154695	.	-	1	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 2985 3051 +
Chr1	stalkie_big_nohaplotig	CDS	54154763	54154866	.	-	0	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 2881 2984 +
Chr1	stalkie_big_nohaplotig	CDS	54154985	54155408	.	-	1	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 2457 2880 +
Chr1	stalkie_big_nohaplotig	CDS	54155480	54155679	.	-	0	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 2257 2456 +
Chr1	stalkie_big_nohaplotig	CDS	54155744	54155940	.	-	2	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 2060 2256 +
Chr1	stalkie_big_nohaplotig	CDS	54155997	54156453	.	-	0	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 1603 2059 +
Chr1	stalkie_big_nohaplotig	CDS	54156540	54156655	.	-	2	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 1487 1602 +
Chr1	stalkie_big_nohaplotig	CDS	54156716	54157741	.	-	2	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 461 1486 +
Chr1	stalkie_big_nohaplotig	CDS	54157949	54158063	.	-	0	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 346 460 +
Chr1	stalkie_big_nohaplotig	CDS	54159107	54159210	.	-	2	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 242 345 +
Chr1	stalkie_big_nohaplotig	CDS	54159507	54159627	.	-	0	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 121 241 +
Chr1	stalkie_big_nohaplotig	CDS	54159814	54159933	.	-	0	Parent=FBgn0013563.1.mrna1;Target=FBgn0013563.1 1 120 +
Chr1	gffcl	locus	54164516	54165198	.	+	.	ID=RLOC_00008017;geneIDs=comp153823_c0_seq1.path1;transcripts=comp153823_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54164516	54165198	.	+	.	ID=comp153823_c0_seq1.mrna1;geneID=comp153823_c0_seq1.path1;Name=comp153823_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=678;mismatches=4;indels=1;unknowns=0;Target=comp153823_c0_seq1 682 1 .;CDS_Target=comp153823_c0_seq1 550 458 .;locus=RLOC_00008017
Chr1	stalkie_big_nohaplotig	exon	54164516	54165198	99	+	.	Parent=comp153823_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	54164974	54165066	.	+	0	Parent=comp153823_c0_seq1.mrna1
Chr1	gffcl	locus	54167348	54235455	.	-	.	ID=RLOC_00008018;geneIDs=FBgn0052138.1.path1,comp156820_c1_seq1.path1;transcripts=comp156820_c1_seq1.mrna1,FBgn0052138.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54167348	54235455	.	-	.	ID=comp156820_c1_seq1.mrna1;geneID=comp156820_c1_seq1.path1;Name=comp156820_c1_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=5335;mismatches=4;indels=2;unknowns=0;locus=RLOC_00008018
Chr1	stalkie_big_nohaplotig	exon	54167348	54168338	99	-	.	Parent=comp156820_c1_seq1.mrna1;Target=comp156820_c1_seq1 4351 5342 +
Chr1	stalkie_big_nohaplotig	exon	54170194	54170618	99	-	.	Parent=comp156820_c1_seq1.mrna1;Target=comp156820_c1_seq1 3925 4350 +
Chr1	stalkie_big_nohaplotig	exon	54170828	54170938	100	-	.	Parent=comp156820_c1_seq1.mrna1;Target=comp156820_c1_seq1 3814 3924 +
Chr1	stalkie_big_nohaplotig	exon	54171081	54171635	100	-	.	Parent=comp156820_c1_seq1.mrna1;Target=comp156820_c1_seq1 3259 3813 +
Chr1	stalkie_big_nohaplotig	exon	54171702	54171994	100	-	.	Parent=comp156820_c1_seq1.mrna1;Target=comp156820_c1_seq1 2966 3258 +
Chr1	stalkie_big_nohaplotig	exon	54172063	54172276	100	-	.	Parent=comp156820_c1_seq1.mrna1;Target=comp156820_c1_seq1 2752 2965 +
Chr1	stalkie_big_nohaplotig	exon	54172420	54174126	99	-	.	Parent=comp156820_c1_seq1.mrna1;Target=comp156820_c1_seq1 1045 2751 +
Chr1	stalkie_big_nohaplotig	exon	54174976	54175062	100	-	.	Parent=comp156820_c1_seq1.mrna1;Target=comp156820_c1_seq1 958 1044 +
Chr1	stalkie_big_nohaplotig	exon	54198591	54198674	97	-	.	Parent=comp156820_c1_seq1.mrna1;Target=comp156820_c1_seq1 874 957 +
Chr1	stalkie_big_nohaplotig	exon	54234249	54234881	99	-	.	Parent=comp156820_c1_seq1.mrna1;Target=comp156820_c1_seq1 241 873 +
Chr1	stalkie_big_nohaplotig	exon	54235217	54235455	100	-	.	Parent=comp156820_c1_seq1.mrna1;Target=comp156820_c1_seq1 2 240 +
Chr1	stalkie_big_nohaplotig	CDS	54170556	54170618	.	-	0	Parent=comp156820_c1_seq1.mrna1;Target=comp156820_c1_seq1 3925 3987 +
Chr1	stalkie_big_nohaplotig	CDS	54170828	54170938	.	-	0	Parent=comp156820_c1_seq1.mrna1;Target=comp156820_c1_seq1 3814 3924 +
Chr1	stalkie_big_nohaplotig	CDS	54171081	54171635	.	-	0	Parent=comp156820_c1_seq1.mrna1;Target=comp156820_c1_seq1 3259 3813 +
Chr1	stalkie_big_nohaplotig	CDS	54171702	54171994	.	-	2	Parent=comp156820_c1_seq1.mrna1;Target=comp156820_c1_seq1 2966 3258 +
Chr1	stalkie_big_nohaplotig	CDS	54172063	54172276	.	-	0	Parent=comp156820_c1_seq1.mrna1;Target=comp156820_c1_seq1 2752 2965 +
Chr1	stalkie_big_nohaplotig	CDS	54172420	54174126	.	-	0	Parent=comp156820_c1_seq1.mrna1;Target=comp156820_c1_seq1 1045 2751 +
Chr1	stalkie_big_nohaplotig	CDS	54174976	54175062	.	-	0	Parent=comp156820_c1_seq1.mrna1;Target=comp156820_c1_seq1 958 1044 +
Chr1	stalkie_big_nohaplotig	CDS	54198591	54198674	.	-	0	Parent=comp156820_c1_seq1.mrna1;Target=comp156820_c1_seq1 874 957 +
Chr1	stalkie_big_nohaplotig	CDS	54234249	54234506	.	-	0	Parent=comp156820_c1_seq1.mrna1;Target=comp156820_c1_seq1 616 873 +
Chr1	stalkie_big_nohaplotig	mRNA	54168099	54234722	.	-	.	ID=FBgn0052138.1.mrna1;geneID=FBgn0052138.1.path1;Name=FBgn0052138.1;Dir=sensecoverage=100.0;identity=99.9;matches=3762;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008018
Chr1	stalkie_big_nohaplotig	exon	54168099	54168338	100	-	.	Parent=FBgn0052138.1.mrna1;Target=FBgn0052138.1 3526 3765 +
Chr1	stalkie_big_nohaplotig	exon	54170828	54170938	100	-	.	Parent=FBgn0052138.1.mrna1;Target=FBgn0052138.1 3415 3525 +
Chr1	stalkie_big_nohaplotig	exon	54171081	54171635	100	-	.	Parent=FBgn0052138.1.mrna1;Target=FBgn0052138.1 2860 3414 +
Chr1	stalkie_big_nohaplotig	exon	54171702	54171994	100	-	.	Parent=FBgn0052138.1.mrna1;Target=FBgn0052138.1 2567 2859 +
Chr1	stalkie_big_nohaplotig	exon	54172063	54172276	100	-	.	Parent=FBgn0052138.1.mrna1;Target=FBgn0052138.1 2353 2566 +
Chr1	stalkie_big_nohaplotig	exon	54172420	54174126	99	-	.	Parent=FBgn0052138.1.mrna1;Target=FBgn0052138.1 646 2352 +
Chr1	stalkie_big_nohaplotig	exon	54174976	54175062	100	-	.	Parent=FBgn0052138.1.mrna1;Target=FBgn0052138.1 559 645 +
Chr1	stalkie_big_nohaplotig	exon	54198591	54198674	97	-	.	Parent=FBgn0052138.1.mrna1;Target=FBgn0052138.1 475 558 +
Chr1	stalkie_big_nohaplotig	exon	54234249	54234722	100	-	.	Parent=FBgn0052138.1.mrna1;Target=FBgn0052138.1 1 474 +
Chr1	stalkie_big_nohaplotig	CDS	54168099	54168338	.	-	0	Parent=FBgn0052138.1.mrna1;Target=FBgn0052138.1 3526 3765 +
Chr1	stalkie_big_nohaplotig	CDS	54170828	54170938	.	-	0	Parent=FBgn0052138.1.mrna1;Target=FBgn0052138.1 3415 3525 +
Chr1	stalkie_big_nohaplotig	CDS	54171081	54171635	.	-	0	Parent=FBgn0052138.1.mrna1;Target=FBgn0052138.1 2860 3414 +
Chr1	stalkie_big_nohaplotig	CDS	54171702	54171994	.	-	2	Parent=FBgn0052138.1.mrna1;Target=FBgn0052138.1 2567 2859 +
Chr1	stalkie_big_nohaplotig	CDS	54172063	54172276	.	-	0	Parent=FBgn0052138.1.mrna1;Target=FBgn0052138.1 2353 2566 +
Chr1	stalkie_big_nohaplotig	CDS	54172420	54174126	.	-	0	Parent=FBgn0052138.1.mrna1;Target=FBgn0052138.1 646 2352 +
Chr1	stalkie_big_nohaplotig	CDS	54174976	54175062	.	-	0	Parent=FBgn0052138.1.mrna1;Target=FBgn0052138.1 559 645 +
Chr1	stalkie_big_nohaplotig	CDS	54198591	54198674	.	-	0	Parent=FBgn0052138.1.mrna1;Target=FBgn0052138.1 475 558 +
Chr1	stalkie_big_nohaplotig	CDS	54234249	54234722	.	-	0	Parent=FBgn0052138.1.mrna1;Target=FBgn0052138.1 1 474 +
Chr1	gffcl	locus	54241851	54242644	.	+	.	ID=RLOC_00008019;geneIDs=comp146757_c0_seq1.path1;transcripts=comp146757_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54241851	54242644	.	+	.	ID=comp146757_c0_seq1.mrna1;geneID=comp146757_c0_seq1.path1;Name=comp146757_c0_seq1;Dir=antisensecoverage=100.0;identity=98.7;matches=731;mismatches=6;indels=4;unknowns=0;locus=RLOC_00008019
Chr1	stalkie_big_nohaplotig	exon	54241851	54242340	99	+	.	Parent=comp146757_c0_seq1.mrna1;Target=comp146757_c0_seq1 248 737 -
Chr1	stalkie_big_nohaplotig	exon	54242394	54242644	97	+	.	Parent=comp146757_c0_seq1.mrna1;Target=comp146757_c0_seq1 1 247 -
Chr1	stalkie_big_nohaplotig	CDS	54242035	54242340	.	+	0	Parent=comp146757_c0_seq1.mrna1;Target=comp146757_c0_seq1 248 553 .
Chr1	stalkie_big_nohaplotig	CDS	54242394	54242537	.	+	0	Parent=comp146757_c0_seq1.mrna1;Target=comp146757_c0_seq1 104 247 .
Chr1	gffcl	locus	54242728	54244310	.	-	.	ID=RLOC_00008020;geneIDs=FBgn0036405.1.path1;transcripts=FBgn0036405.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54242728	54244310	.	-	.	ID=FBgn0036405.1.mrna1;geneID=FBgn0036405.1.path1;Name=FBgn0036405.1;Dir=sensecoverage=100.0;identity=99.7;matches=1196;mismatches=4;indels=0;unknowns=0;locus=RLOC_00008020
Chr1	stalkie_big_nohaplotig	exon	54242728	54243026	99	-	.	Parent=FBgn0036405.1.mrna1;Target=FBgn0036405.1 902 1200 +
Chr1	stalkie_big_nohaplotig	exon	54243093	54243521	99	-	.	Parent=FBgn0036405.1.mrna1;Target=FBgn0036405.1 473 901 +
Chr1	stalkie_big_nohaplotig	exon	54243839	54244310	99	-	.	Parent=FBgn0036405.1.mrna1;Target=FBgn0036405.1 1 472 +
Chr1	stalkie_big_nohaplotig	CDS	54242728	54243026	.	-	2	Parent=FBgn0036405.1.mrna1;Target=FBgn0036405.1 902 1200 +
Chr1	stalkie_big_nohaplotig	CDS	54243093	54243521	.	-	2	Parent=FBgn0036405.1.mrna1;Target=FBgn0036405.1 473 901 +
Chr1	stalkie_big_nohaplotig	CDS	54243839	54244310	.	-	0	Parent=FBgn0036405.1.mrna1;Target=FBgn0036405.1 1 472 +
Chr1	gffcl	locus	54257649	54263415	.	-	.	ID=RLOC_00008021;geneIDs=FBgn0262733.1.path1;transcripts=FBgn0262733.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54257649	54263415	.	-	.	ID=FBgn0262733.1.mrna1;geneID=FBgn0262733.1.path1;Name=FBgn0262733.1;Dir=sensecoverage=100.0;identity=99.6;matches=2252;mismatches=10;indels=0;unknowns=0;locus=RLOC_00008021
Chr1	stalkie_big_nohaplotig	exon	54257649	54258224	99	-	.	Parent=FBgn0262733.1.mrna1;Target=FBgn0262733.1 1687 2262 +
Chr1	stalkie_big_nohaplotig	exon	54260337	54260599	98	-	.	Parent=FBgn0262733.1.mrna1;Target=FBgn0262733.1 1424 1686 +
Chr1	stalkie_big_nohaplotig	exon	54261413	54261670	100	-	.	Parent=FBgn0262733.1.mrna1;Target=FBgn0262733.1 1166 1423 +
Chr1	stalkie_big_nohaplotig	exon	54261915	54262013	100	-	.	Parent=FBgn0262733.1.mrna1;Target=FBgn0262733.1 1067 1165 +
Chr1	stalkie_big_nohaplotig	exon	54262087	54262215	100	-	.	Parent=FBgn0262733.1.mrna1;Target=FBgn0262733.1 938 1066 +
Chr1	stalkie_big_nohaplotig	exon	54262285	54262410	98	-	.	Parent=FBgn0262733.1.mrna1;Target=FBgn0262733.1 812 937 +
Chr1	stalkie_big_nohaplotig	exon	54262485	54262631	100	-	.	Parent=FBgn0262733.1.mrna1;Target=FBgn0262733.1 665 811 +
Chr1	stalkie_big_nohaplotig	exon	54262694	54262975	100	-	.	Parent=FBgn0262733.1.mrna1;Target=FBgn0262733.1 383 664 +
Chr1	stalkie_big_nohaplotig	exon	54263034	54263415	99	-	.	Parent=FBgn0262733.1.mrna1;Target=FBgn0262733.1 1 382 +
Chr1	stalkie_big_nohaplotig	CDS	54257649	54258224	.	-	0	Parent=FBgn0262733.1.mrna1;Target=FBgn0262733.1 1687 2262 +
Chr1	stalkie_big_nohaplotig	CDS	54260337	54260599	.	-	2	Parent=FBgn0262733.1.mrna1;Target=FBgn0262733.1 1424 1686 +
Chr1	stalkie_big_nohaplotig	CDS	54261413	54261670	.	-	2	Parent=FBgn0262733.1.mrna1;Target=FBgn0262733.1 1166 1423 +
Chr1	stalkie_big_nohaplotig	CDS	54261915	54262013	.	-	2	Parent=FBgn0262733.1.mrna1;Target=FBgn0262733.1 1067 1165 +
Chr1	stalkie_big_nohaplotig	CDS	54262087	54262215	.	-	2	Parent=FBgn0262733.1.mrna1;Target=FBgn0262733.1 938 1066 +
Chr1	stalkie_big_nohaplotig	CDS	54262285	54262410	.	-	2	Parent=FBgn0262733.1.mrna1;Target=FBgn0262733.1 812 937 +
Chr1	stalkie_big_nohaplotig	CDS	54262485	54262631	.	-	2	Parent=FBgn0262733.1.mrna1;Target=FBgn0262733.1 665 811 +
Chr1	stalkie_big_nohaplotig	CDS	54262694	54262975	.	-	2	Parent=FBgn0262733.1.mrna1;Target=FBgn0262733.1 383 664 +
Chr1	stalkie_big_nohaplotig	CDS	54263034	54263415	.	-	0	Parent=FBgn0262733.1.mrna1;Target=FBgn0262733.1 1 382 +
Chr1	gffcl	locus	54265054	54268801	.	-	.	ID=RLOC_00008022;geneIDs=Dv_FBgn0201266.5.path1,comp159854_c0_seq1.path1;transcripts=comp159854_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54265054	54268801	.	-	.	ID=comp159854_c0_seq1.mrna1;geneID=comp159854_c0_seq1.path1;Name=comp159854_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=3154;mismatches=47;indels=4;unknowns=0;locus=RLOC_00008022
Chr1	stalkie_big_nohaplotig	exon	54265054	54265502	99	-	.	Parent=comp159854_c0_seq1.mrna1;Target=comp159854_c0_seq1 3203 2755 .
Chr1	stalkie_big_nohaplotig	exon	54265556	54266780	97	-	.	Parent=comp159854_c0_seq1.mrna1;Target=comp159854_c0_seq1 2754 1530 .
Chr1	stalkie_big_nohaplotig	exon	54267098	54267624	99	-	.	Parent=comp159854_c0_seq1.mrna1;Target=comp159854_c0_seq1 1529 1003 .
Chr1	stalkie_big_nohaplotig	exon	54267687	54267789	100	-	.	Parent=comp159854_c0_seq1.mrna1;Target=comp159854_c0_seq1 1002 900 .
Chr1	stalkie_big_nohaplotig	exon	54267845	54268244	98	-	.	Parent=comp159854_c0_seq1.mrna1;Target=comp159854_c0_seq1 899 500 .
Chr1	stalkie_big_nohaplotig	exon	54268303	54268801	99	-	.	Parent=comp159854_c0_seq1.mrna1;Target=comp159854_c0_seq1 499 1 .
Chr1	stalkie_big_nohaplotig	CDS	54266644	54266780	.	-	2	Parent=comp159854_c0_seq1.mrna1;Target=comp159854_c0_seq1 1666 1530 .
Chr1	stalkie_big_nohaplotig	CDS	54267098	54267624	.	-	1	Parent=comp159854_c0_seq1.mrna1;Target=comp159854_c0_seq1 1529 1003 .
Chr1	stalkie_big_nohaplotig	CDS	54267687	54267789	.	-	2	Parent=comp159854_c0_seq1.mrna1;Target=comp159854_c0_seq1 1002 900 .
Chr1	stalkie_big_nohaplotig	CDS	54267845	54268244	.	-	0	Parent=comp159854_c0_seq1.mrna1;Target=comp159854_c0_seq1 899 500 .
Chr1	stalkie_big_nohaplotig	CDS	54268303	54268446	.	-	0	Parent=comp159854_c0_seq1.mrna1;Target=comp159854_c0_seq1 499 356 .
Chr1	gffcl	locus	54276223	54281245	.	+	.	ID=RLOC_00008024;geneIDs=FBgn0250791.1.path1;transcripts=FBgn0250791.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54276223	54281245	.	+	.	ID=FBgn0250791.1.mrna1;geneID=FBgn0250791.1.path1;Name=FBgn0250791.1;Dir=sensecoverage=100.0;identity=99.9;matches=902;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008024
Chr1	stalkie_big_nohaplotig	exon	54276223	54276341	100	+	.	Parent=FBgn0250791.1.mrna1;Target=FBgn0250791.1 1 119 +
Chr1	stalkie_big_nohaplotig	exon	54278641	54278824	99	+	.	Parent=FBgn0250791.1.mrna1;Target=FBgn0250791.1 120 303 +
Chr1	stalkie_big_nohaplotig	exon	54278885	54279016	100	+	.	Parent=FBgn0250791.1.mrna1;Target=FBgn0250791.1 304 435 +
Chr1	stalkie_big_nohaplotig	exon	54279094	54279240	100	+	.	Parent=FBgn0250791.1.mrna1;Target=FBgn0250791.1 436 582 +
Chr1	stalkie_big_nohaplotig	exon	54279311	54279484	100	+	.	Parent=FBgn0250791.1.mrna1;Target=FBgn0250791.1 583 756 +
Chr1	stalkie_big_nohaplotig	exon	54281099	54281245	100	+	.	Parent=FBgn0250791.1.mrna1;Target=FBgn0250791.1 757 903 +
Chr1	stalkie_big_nohaplotig	CDS	54276223	54276341	.	+	0	Parent=FBgn0250791.1.mrna1;Target=FBgn0250791.1 1 119 +
Chr1	stalkie_big_nohaplotig	CDS	54278641	54278824	.	+	1	Parent=FBgn0250791.1.mrna1;Target=FBgn0250791.1 120 303 +
Chr1	stalkie_big_nohaplotig	CDS	54278885	54279016	.	+	0	Parent=FBgn0250791.1.mrna1;Target=FBgn0250791.1 304 435 +
Chr1	stalkie_big_nohaplotig	CDS	54279094	54279240	.	+	0	Parent=FBgn0250791.1.mrna1;Target=FBgn0250791.1 436 582 +
Chr1	stalkie_big_nohaplotig	CDS	54279311	54279484	.	+	0	Parent=FBgn0250791.1.mrna1;Target=FBgn0250791.1 583 756 +
Chr1	stalkie_big_nohaplotig	CDS	54281099	54281245	.	+	0	Parent=FBgn0250791.1.mrna1;Target=FBgn0250791.1 757 903 +
Chr1	gffcl	locus	54279993	54280726	.	-	.	ID=RLOC_00008025;geneIDs=comp155166_c1_seq1.path1;transcripts=comp155166_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54279993	54280726	.	-	.	ID=comp155166_c1_seq1.mrna1;geneID=comp155166_c1_seq1.path1;Name=comp155166_c1_seq1;Dir=indeterminatecoverage=69.1;identity=95.1;matches=718;mismatches=16;indels=21;unknowns=0;Target=comp155166_c1_seq1 755 1 .;CDS_Target=comp155166_c1_seq1 259 152 .;locus=RLOC_00008025
Chr1	stalkie_big_nohaplotig	exon	54279993	54280726	95	-	.	Parent=comp155166_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	54280468	54280575	.	-	0	Parent=comp155166_c1_seq1.mrna1
Chr1	gffcl	locus	54289113	54295457	.	+	.	ID=RLOC_00008026;geneIDs=FBgn0262057.1.path1;transcripts=FBgn0262057.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54289113	54295457	.	+	.	ID=FBgn0262057.1.mrna1;geneID=FBgn0262057.1.path1;Name=FBgn0262057.1;Dir=sensecoverage=99.9;identity=99.9;matches=1270;mismatches=0;indels=1;unknowns=0;locus=RLOC_00008026
Chr1	stalkie_big_nohaplotig	exon	54289113	54289136	100	+	.	Parent=FBgn0262057.1.mrna1;Target=FBgn0262057.1 2 25 +
Chr1	stalkie_big_nohaplotig	exon	54293961	54294417	100	+	.	Parent=FBgn0262057.1.mrna1;Target=FBgn0262057.1 26 482 +
Chr1	stalkie_big_nohaplotig	exon	54294473	54294749	100	+	.	Parent=FBgn0262057.1.mrna1;Target=FBgn0262057.1 483 759 +
Chr1	stalkie_big_nohaplotig	exon	54294817	54295012	100	+	.	Parent=FBgn0262057.1.mrna1;Target=FBgn0262057.1 760 955 +
Chr1	stalkie_big_nohaplotig	exon	54295079	54295245	100	+	.	Parent=FBgn0262057.1.mrna1;Target=FBgn0262057.1 956 1122 +
Chr1	stalkie_big_nohaplotig	exon	54295309	54295457	99	+	.	Parent=FBgn0262057.1.mrna1;Target=FBgn0262057.1 1123 1272 +
Chr1	stalkie_big_nohaplotig	CDS	54289115	54289136	.	+	0	Parent=FBgn0262057.1.mrna1;Target=FBgn0262057.1 4 25 +
Chr1	stalkie_big_nohaplotig	CDS	54293961	54294417	.	+	2	Parent=FBgn0262057.1.mrna1;Target=FBgn0262057.1 26 482 +
Chr1	stalkie_big_nohaplotig	CDS	54294473	54294749	.	+	1	Parent=FBgn0262057.1.mrna1;Target=FBgn0262057.1 483 759 +
Chr1	stalkie_big_nohaplotig	CDS	54294817	54295012	.	+	0	Parent=FBgn0262057.1.mrna1;Target=FBgn0262057.1 760 955 +
Chr1	stalkie_big_nohaplotig	CDS	54295079	54295245	.	+	2	Parent=FBgn0262057.1.mrna1;Target=FBgn0262057.1 956 1122 +
Chr1	stalkie_big_nohaplotig	CDS	54295309	54295457	.	+	0	Parent=FBgn0262057.1.mrna1;Target=FBgn0262057.1 1123 1272 +
Chr1	gffcl	locus	54295662	54298639	.	-	.	ID=RLOC_00008027;geneIDs=FBgn0036973.1.path1;transcripts=FBgn0036973.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54295662	54298639	.	-	.	ID=FBgn0036973.1.mrna1;geneID=FBgn0036973.1.path1;Name=FBgn0036973.1;Dir=sensecoverage=100.0;identity=100.0;matches=1485;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008027
Chr1	stalkie_big_nohaplotig	exon	54295662	54295744	100	-	.	Parent=FBgn0036973.1.mrna1;Target=FBgn0036973.1 1403 1485 +
Chr1	stalkie_big_nohaplotig	exon	54295806	54296431	100	-	.	Parent=FBgn0036973.1.mrna1;Target=FBgn0036973.1 777 1402 +
Chr1	stalkie_big_nohaplotig	exon	54297603	54297722	100	-	.	Parent=FBgn0036973.1.mrna1;Target=FBgn0036973.1 657 776 +
Chr1	stalkie_big_nohaplotig	exon	54297790	54297971	100	-	.	Parent=FBgn0036973.1.mrna1;Target=FBgn0036973.1 475 656 +
Chr1	stalkie_big_nohaplotig	exon	54298030	54298236	100	-	.	Parent=FBgn0036973.1.mrna1;Target=FBgn0036973.1 268 474 +
Chr1	stalkie_big_nohaplotig	exon	54298307	54298527	100	-	.	Parent=FBgn0036973.1.mrna1;Target=FBgn0036973.1 47 267 +
Chr1	stalkie_big_nohaplotig	exon	54298594	54298639	100	-	.	Parent=FBgn0036973.1.mrna1;Target=FBgn0036973.1 1 46 +
Chr1	stalkie_big_nohaplotig	CDS	54295662	54295744	.	-	2	Parent=FBgn0036973.1.mrna1;Target=FBgn0036973.1 1403 1485 +
Chr1	stalkie_big_nohaplotig	CDS	54295806	54296431	.	-	1	Parent=FBgn0036973.1.mrna1;Target=FBgn0036973.1 777 1402 +
Chr1	stalkie_big_nohaplotig	CDS	54297603	54297722	.	-	1	Parent=FBgn0036973.1.mrna1;Target=FBgn0036973.1 657 776 +
Chr1	stalkie_big_nohaplotig	CDS	54297790	54297971	.	-	0	Parent=FBgn0036973.1.mrna1;Target=FBgn0036973.1 475 656 +
Chr1	stalkie_big_nohaplotig	CDS	54298030	54298236	.	-	0	Parent=FBgn0036973.1.mrna1;Target=FBgn0036973.1 268 474 +
Chr1	stalkie_big_nohaplotig	CDS	54298307	54298527	.	-	2	Parent=FBgn0036973.1.mrna1;Target=FBgn0036973.1 47 267 +
Chr1	stalkie_big_nohaplotig	CDS	54298594	54298639	.	-	0	Parent=FBgn0036973.1.mrna1;Target=FBgn0036973.1 1 46 +
Chr1	gffcl	locus	54317430	54319930	.	+	.	ID=RLOC_00008028;geneIDs=comp163504_c1_seq1.path1;transcripts=comp163504_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54317430	54319930	.	+	.	ID=comp163504_c1_seq1.mrna1;geneID=comp163504_c1_seq1.path1;Name=comp163504_c1_seq1;Dir=indeterminatecoverage=44.4;identity=99.7;matches=2494;mismatches=7;indels=0;unknowns=0;Target=comp163504_c1_seq1 2906 406 .;CDS_Target=comp163504_c1_seq1 2904 406 .;locus=RLOC_00008028
Chr1	stalkie_big_nohaplotig	exon	54317430	54319930	99	+	.	Parent=comp163504_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	54317430	54319928	.	+	0	Parent=comp163504_c1_seq1.mrna1
Chr1	gffcl	locus	54350756	54350991	.	+	.	ID=RLOC_00008029;geneIDs=comp147368_c1_seq1.path1;transcripts=comp147368_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54350756	54350991	.	+	.	ID=comp147368_c1_seq1.mrna1;geneID=comp147368_c1_seq1.path1;Name=comp147368_c1_seq1;Dir=indeterminatecoverage=75.2;identity=98.3;matches=235;mismatches=1;indels=3;unknowns=0;Target=comp147368_c1_seq1 239 1 .;CDS_Target=comp147368_c1_seq1 130 71 .;locus=RLOC_00008029
Chr1	stalkie_big_nohaplotig	exon	54350756	54350991	98	+	.	Parent=comp147368_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	54350823	54350882	.	+	0	Parent=comp147368_c1_seq1.mrna1
Chr1	gffcl	locus	54354731	54357879	.	+	.	ID=RLOC_00008030;geneIDs=FBgn0003744.1.path1;transcripts=FBgn0003744.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54354731	54357879	.	+	.	ID=FBgn0003744.1.mrna1;geneID=FBgn0003744.1.path1;Name=FBgn0003744.1;Dir=sensecoverage=100.0;identity=99.9;matches=1372;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008030
Chr1	stalkie_big_nohaplotig	exon	54354731	54355210	99	+	.	Parent=FBgn0003744.1.mrna1;Target=FBgn0003744.1 1 480 +
Chr1	stalkie_big_nohaplotig	exon	54356543	54356752	99	+	.	Parent=FBgn0003744.1.mrna1;Target=FBgn0003744.1 481 690 +
Chr1	stalkie_big_nohaplotig	exon	54357062	54357168	100	+	.	Parent=FBgn0003744.1.mrna1;Target=FBgn0003744.1 691 797 +
Chr1	stalkie_big_nohaplotig	exon	54357232	54357716	100	+	.	Parent=FBgn0003744.1.mrna1;Target=FBgn0003744.1 798 1282 +
Chr1	stalkie_big_nohaplotig	exon	54357788	54357879	100	+	.	Parent=FBgn0003744.1.mrna1;Target=FBgn0003744.1 1283 1374 +
Chr1	stalkie_big_nohaplotig	CDS	54354731	54355210	.	+	0	Parent=FBgn0003744.1.mrna1;Target=FBgn0003744.1 1 480 +
Chr1	stalkie_big_nohaplotig	CDS	54356543	54356752	.	+	0	Parent=FBgn0003744.1.mrna1;Target=FBgn0003744.1 481 690 +
Chr1	stalkie_big_nohaplotig	CDS	54357062	54357168	.	+	0	Parent=FBgn0003744.1.mrna1;Target=FBgn0003744.1 691 797 +
Chr1	stalkie_big_nohaplotig	CDS	54357232	54357716	.	+	1	Parent=FBgn0003744.1.mrna1;Target=FBgn0003744.1 798 1282 +
Chr1	stalkie_big_nohaplotig	CDS	54357788	54357879	.	+	2	Parent=FBgn0003744.1.mrna1;Target=FBgn0003744.1 1283 1374 +
Chr1	gffcl	locus	54364001	54371154	.	-	.	ID=RLOC_00008031;geneIDs=FBgn0013799.1.path1;transcripts=FBgn0013799.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54364001	54371154	.	-	.	ID=FBgn0013799.1.mrna1;geneID=FBgn0013799.1.path1;Name=FBgn0013799.1;Dir=sensecoverage=100.0;identity=99.8;matches=1587;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008031
Chr1	stalkie_big_nohaplotig	exon	54364001	54364171	99	-	.	Parent=FBgn0013799.1.mrna1;Target=FBgn0013799.1 1420 1590 +
Chr1	stalkie_big_nohaplotig	exon	54368330	54368898	100	-	.	Parent=FBgn0013799.1.mrna1;Target=FBgn0013799.1 851 1419 +
Chr1	stalkie_big_nohaplotig	exon	54370100	54370742	99	-	.	Parent=FBgn0013799.1.mrna1;Target=FBgn0013799.1 208 850 +
Chr1	stalkie_big_nohaplotig	exon	54370948	54371154	100	-	.	Parent=FBgn0013799.1.mrna1;Target=FBgn0013799.1 1 207 +
Chr1	stalkie_big_nohaplotig	CDS	54364001	54364171	.	-	0	Parent=FBgn0013799.1.mrna1;Target=FBgn0013799.1 1420 1590 +
Chr1	stalkie_big_nohaplotig	CDS	54368330	54368898	.	-	2	Parent=FBgn0013799.1.mrna1;Target=FBgn0013799.1 851 1419 +
Chr1	stalkie_big_nohaplotig	CDS	54370100	54370742	.	-	0	Parent=FBgn0013799.1.mrna1;Target=FBgn0013799.1 208 850 +
Chr1	stalkie_big_nohaplotig	CDS	54370948	54371154	.	-	0	Parent=FBgn0013799.1.mrna1;Target=FBgn0013799.1 1 207 +
Chr1	gffcl	locus	54371933	54374577	.	+	.	ID=RLOC_00008032;geneIDs=FBgn0036911.1.path1;transcripts=FBgn0036911.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54371933	54374577	.	+	.	ID=FBgn0036911.1.mrna1;geneID=FBgn0036911.1.path1;Name=FBgn0036911.1;Dir=sensecoverage=100.0;identity=99.8;matches=1081;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008032
Chr1	stalkie_big_nohaplotig	exon	54371933	54372023	100	+	.	Parent=FBgn0036911.1.mrna1;Target=FBgn0036911.1 1 91 +
Chr1	stalkie_big_nohaplotig	exon	54372118	54372316	100	+	.	Parent=FBgn0036911.1.mrna1;Target=FBgn0036911.1 92 290 +
Chr1	stalkie_big_nohaplotig	exon	54372392	54372511	100	+	.	Parent=FBgn0036911.1.mrna1;Target=FBgn0036911.1 291 410 +
Chr1	stalkie_big_nohaplotig	exon	54372570	54372677	100	+	.	Parent=FBgn0036911.1.mrna1;Target=FBgn0036911.1 411 518 +
Chr1	stalkie_big_nohaplotig	exon	54372839	54373072	99	+	.	Parent=FBgn0036911.1.mrna1;Target=FBgn0036911.1 519 752 +
Chr1	stalkie_big_nohaplotig	exon	54373128	54373196	98	+	.	Parent=FBgn0036911.1.mrna1;Target=FBgn0036911.1 753 821 +
Chr1	stalkie_big_nohaplotig	exon	54374252	54374437	100	+	.	Parent=FBgn0036911.1.mrna1;Target=FBgn0036911.1 822 1007 +
Chr1	stalkie_big_nohaplotig	exon	54374502	54374577	100	+	.	Parent=FBgn0036911.1.mrna1;Target=FBgn0036911.1 1008 1083 +
Chr1	stalkie_big_nohaplotig	CDS	54371933	54372023	.	+	0	Parent=FBgn0036911.1.mrna1;Target=FBgn0036911.1 1 91 +
Chr1	stalkie_big_nohaplotig	CDS	54372118	54372316	.	+	2	Parent=FBgn0036911.1.mrna1;Target=FBgn0036911.1 92 290 +
Chr1	stalkie_big_nohaplotig	CDS	54372392	54372511	.	+	1	Parent=FBgn0036911.1.mrna1;Target=FBgn0036911.1 291 410 +
Chr1	stalkie_big_nohaplotig	CDS	54372570	54372677	.	+	1	Parent=FBgn0036911.1.mrna1;Target=FBgn0036911.1 411 518 +
Chr1	stalkie_big_nohaplotig	CDS	54372839	54373072	.	+	1	Parent=FBgn0036911.1.mrna1;Target=FBgn0036911.1 519 752 +
Chr1	stalkie_big_nohaplotig	CDS	54373128	54373196	.	+	1	Parent=FBgn0036911.1.mrna1;Target=FBgn0036911.1 753 821 +
Chr1	stalkie_big_nohaplotig	CDS	54374252	54374437	.	+	1	Parent=FBgn0036911.1.mrna1;Target=FBgn0036911.1 822 1007 +
Chr1	stalkie_big_nohaplotig	CDS	54374502	54374577	.	+	1	Parent=FBgn0036911.1.mrna1;Target=FBgn0036911.1 1008 1083 +
Chr1	gffcl	locus	54377968	54380298	.	+	.	ID=RLOC_00008033;geneIDs=FBgn0023094.1.path1;transcripts=FBgn0023094.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54377968	54380298	.	+	.	ID=FBgn0023094.1.mrna1;geneID=FBgn0023094.1.path1;Name=FBgn0023094.1;Dir=sensecoverage=100.0;identity=99.6;matches=1234;mismatches=5;indels=0;unknowns=0;locus=RLOC_00008033
Chr1	stalkie_big_nohaplotig	exon	54377968	54377996	100	+	.	Parent=FBgn0023094.1.mrna1;Target=FBgn0023094.1 1 29 +
Chr1	stalkie_big_nohaplotig	exon	54378383	54378457	100	+	.	Parent=FBgn0023094.1.mrna1;Target=FBgn0023094.1 30 104 +
Chr1	stalkie_big_nohaplotig	exon	54378561	54379009	99	+	.	Parent=FBgn0023094.1.mrna1;Target=FBgn0023094.1 105 553 +
Chr1	stalkie_big_nohaplotig	exon	54379529	54379955	99	+	.	Parent=FBgn0023094.1.mrna1;Target=FBgn0023094.1 554 980 +
Chr1	stalkie_big_nohaplotig	exon	54380040	54380298	100	+	.	Parent=FBgn0023094.1.mrna1;Target=FBgn0023094.1 981 1239 +
Chr1	stalkie_big_nohaplotig	CDS	54377968	54377996	.	+	0	Parent=FBgn0023094.1.mrna1;Target=FBgn0023094.1 1 29 +
Chr1	stalkie_big_nohaplotig	CDS	54378383	54378457	.	+	1	Parent=FBgn0023094.1.mrna1;Target=FBgn0023094.1 30 104 +
Chr1	stalkie_big_nohaplotig	CDS	54378561	54379009	.	+	1	Parent=FBgn0023094.1.mrna1;Target=FBgn0023094.1 105 553 +
Chr1	stalkie_big_nohaplotig	CDS	54379529	54379955	.	+	2	Parent=FBgn0023094.1.mrna1;Target=FBgn0023094.1 554 980 +
Chr1	stalkie_big_nohaplotig	CDS	54380040	54380298	.	+	1	Parent=FBgn0023094.1.mrna1;Target=FBgn0023094.1 981 1239 +
Chr1	gffcl	locus	54387090	54398201	.	+	.	ID=RLOC_00008034;geneIDs=FBgn0036910.1.path1;transcripts=FBgn0036910.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54387090	54398201	.	+	.	ID=FBgn0036910.1.mrna1;geneID=FBgn0036910.1.path1;Name=FBgn0036910.1;Dir=sensecoverage=100.0;identity=99.4;matches=1506;mismatches=9;indels=0;unknowns=0;locus=RLOC_00008034
Chr1	stalkie_big_nohaplotig	exon	54387090	54387201	100	+	.	Parent=FBgn0036910.1.mrna1;Target=FBgn0036910.1 1 112 +
Chr1	stalkie_big_nohaplotig	exon	54396799	54398201	99	+	.	Parent=FBgn0036910.1.mrna1;Target=FBgn0036910.1 113 1515 +
Chr1	stalkie_big_nohaplotig	CDS	54387090	54387201	.	+	0	Parent=FBgn0036910.1.mrna1;Target=FBgn0036910.1 1 112 +
Chr1	stalkie_big_nohaplotig	CDS	54396799	54398201	.	+	2	Parent=FBgn0036910.1.mrna1;Target=FBgn0036910.1 113 1515 +
Chr1	gffcl	locus	54403953	54462676	.	-	.	ID=RLOC_00008035;geneIDs=FBgn0001078.1.path1;transcripts=FBgn0001078.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54403953	54462676	.	-	.	ID=FBgn0001078.1.mrna1;geneID=FBgn0001078.1.path1;Name=FBgn0001078.1;Dir=sensecoverage=100.0;identity=99.8;matches=2815;mismatches=5;indels=0;unknowns=0;locus=RLOC_00008035
Chr1	stalkie_big_nohaplotig	exon	54403953	54404099	100	-	.	Parent=FBgn0001078.1.mrna1;Target=FBgn0001078.1 2674 2820 +
Chr1	stalkie_big_nohaplotig	exon	54404248	54404348	100	-	.	Parent=FBgn0001078.1.mrna1;Target=FBgn0001078.1 2573 2673 +
Chr1	stalkie_big_nohaplotig	exon	54404424	54404682	100	-	.	Parent=FBgn0001078.1.mrna1;Target=FBgn0001078.1 2314 2572 +
Chr1	stalkie_big_nohaplotig	exon	54406672	54406870	99	-	.	Parent=FBgn0001078.1.mrna1;Target=FBgn0001078.1 2115 2313 +
Chr1	stalkie_big_nohaplotig	exon	54406934	54406990	100	-	.	Parent=FBgn0001078.1.mrna1;Target=FBgn0001078.1 2058 2114 +
Chr1	stalkie_big_nohaplotig	exon	54407306	54407559	100	-	.	Parent=FBgn0001078.1.mrna1;Target=FBgn0001078.1 1804 2057 +
Chr1	stalkie_big_nohaplotig	exon	54407790	54408010	100	-	.	Parent=FBgn0001078.1.mrna1;Target=FBgn0001078.1 1583 1803 +
Chr1	stalkie_big_nohaplotig	exon	54425897	54426385	100	-	.	Parent=FBgn0001078.1.mrna1;Target=FBgn0001078.1 1094 1582 +
Chr1	stalkie_big_nohaplotig	exon	54461584	54462676	99	-	.	Parent=FBgn0001078.1.mrna1;Target=FBgn0001078.1 1 1093 +
Chr1	stalkie_big_nohaplotig	CDS	54403953	54404099	.	-	0	Parent=FBgn0001078.1.mrna1;Target=FBgn0001078.1 2674 2820 +
Chr1	stalkie_big_nohaplotig	CDS	54404248	54404348	.	-	2	Parent=FBgn0001078.1.mrna1;Target=FBgn0001078.1 2573 2673 +
Chr1	stalkie_big_nohaplotig	CDS	54404424	54404682	.	-	0	Parent=FBgn0001078.1.mrna1;Target=FBgn0001078.1 2314 2572 +
Chr1	stalkie_big_nohaplotig	CDS	54406672	54406870	.	-	1	Parent=FBgn0001078.1.mrna1;Target=FBgn0001078.1 2115 2313 +
Chr1	stalkie_big_nohaplotig	CDS	54406934	54406990	.	-	1	Parent=FBgn0001078.1.mrna1;Target=FBgn0001078.1 2058 2114 +
Chr1	stalkie_big_nohaplotig	CDS	54407306	54407559	.	-	0	Parent=FBgn0001078.1.mrna1;Target=FBgn0001078.1 1804 2057 +
Chr1	stalkie_big_nohaplotig	CDS	54407790	54408010	.	-	2	Parent=FBgn0001078.1.mrna1;Target=FBgn0001078.1 1583 1803 +
Chr1	stalkie_big_nohaplotig	CDS	54425897	54426385	.	-	2	Parent=FBgn0001078.1.mrna1;Target=FBgn0001078.1 1094 1582 +
Chr1	stalkie_big_nohaplotig	CDS	54461584	54462676	.	-	0	Parent=FBgn0001078.1.mrna1;Target=FBgn0001078.1 1 1093 +
Chr1	gffcl	locus	54475726	54479586	.	+	.	ID=RLOC_00008036;geneIDs=FBgn0036897.1.path1;transcripts=FBgn0036897.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54475726	54479586	.	+	.	ID=FBgn0036897.1.mrna1;geneID=FBgn0036897.1.path1;Name=FBgn0036897.1;Dir=sensecoverage=100.0;identity=99.5;matches=1277;mismatches=1;indels=6;unknowns=0;locus=RLOC_00008036
Chr1	stalkie_big_nohaplotig	exon	54475726	54475993	97	+	.	Parent=FBgn0036897.1.mrna1;Target=FBgn0036897.1 1 262 +
Chr1	stalkie_big_nohaplotig	exon	54476061	54476167	100	+	.	Parent=FBgn0036897.1.mrna1;Target=FBgn0036897.1 263 369 +
Chr1	stalkie_big_nohaplotig	exon	54478220	54478373	100	+	.	Parent=FBgn0036897.1.mrna1;Target=FBgn0036897.1 370 523 +
Chr1	stalkie_big_nohaplotig	exon	54478832	54479586	100	+	.	Parent=FBgn0036897.1.mrna1;Target=FBgn0036897.1 524 1278 +
Chr1	stalkie_big_nohaplotig	CDS	54475726	54475993	.	+	0	Parent=FBgn0036897.1.mrna1;Target=FBgn0036897.1 1 262 +
Chr1	stalkie_big_nohaplotig	CDS	54476061	54476167	.	+	2	Parent=FBgn0036897.1.mrna1;Target=FBgn0036897.1 263 369 +
Chr1	stalkie_big_nohaplotig	CDS	54478220	54478373	.	+	0	Parent=FBgn0036897.1.mrna1;Target=FBgn0036897.1 370 523 +
Chr1	stalkie_big_nohaplotig	CDS	54478832	54479586	.	+	2	Parent=FBgn0036897.1.mrna1;Target=FBgn0036897.1 524 1278 +
Chr1	gffcl	locus	54480171	54480451	.	+	.	ID=RLOC_00008037;geneIDs=comp151814_c0_seq1.path1;transcripts=comp151814_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54480171	54480451	.	+	.	ID=comp151814_c0_seq1.mrna1;geneID=comp151814_c0_seq1.path1;Name=comp151814_c0_seq1;Dir=indeterminatecoverage=91.3;identity=99.6;matches=281;mismatches=0;indels=1;unknowns=0;Target=comp151814_c0_seq1 309 28 .;CDS_Target=comp151814_c0_seq1 212 132 .;locus=RLOC_00008037
Chr1	stalkie_big_nohaplotig	exon	54480171	54480451	99	+	.	Parent=comp151814_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	54480275	54480355	.	+	0	Parent=comp151814_c0_seq1.mrna1
Chr1	gffcl	locus	54481125	54483061	.	+	.	ID=RLOC_00008038;geneIDs=comp156423_c0_seq1.path1;transcripts=comp156423_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54481125	54483061	.	+	.	ID=comp156423_c0_seq1.mrna1;geneID=comp156423_c0_seq1.path1;Name=comp156423_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1929;mismatches=8;indels=3;unknowns=0;Target=comp156423_c0_seq1 1940 1 .;CDS_Target=comp156423_c0_seq1 1014 856 .;locus=RLOC_00008038
Chr1	stalkie_big_nohaplotig	exon	54481125	54483061	99	+	.	Parent=comp156423_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	54481977	54482135	.	+	0	Parent=comp156423_c0_seq1.mrna1
Chr1	gffcl	locus	54497221	54497658	.	-	.	ID=RLOC_00008039;geneIDs=comp117931_c3_seq1.path1;transcripts=comp117931_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54497221	54497658	.	-	.	ID=comp117931_c3_seq1.mrna1;geneID=comp117931_c3_seq1.path1;Name=comp117931_c3_seq1;Dir=indeterminatecoverage=95.8;identity=100.0;matches=438;mismatches=0;indels=0;unknowns=0;Target=comp117931_c3_seq1 457 20 .;CDS_Target=comp117931_c3_seq1 54 22 .;locus=RLOC_00008039
Chr1	stalkie_big_nohaplotig	exon	54497221	54497658	100	-	.	Parent=comp117931_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	54497624	54497656	.	-	0	Parent=comp117931_c3_seq1.mrna1
Chr1	gffcl	locus	54514603	54541201	.	+	.	ID=RLOC_00008041;geneIDs=FBgn0036896.1.path1;transcripts=FBgn0036896.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54514603	54541201	.	+	.	ID=FBgn0036896.1.mrna1;geneID=FBgn0036896.1.path1;Name=FBgn0036896.1;Dir=sensecoverage=100.0;identity=99.7;matches=2013;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008041
Chr1	stalkie_big_nohaplotig	exon	54514603	54514751	100	+	.	Parent=FBgn0036896.1.mrna1;Target=FBgn0036896.1 1 149 +
Chr1	stalkie_big_nohaplotig	exon	54538204	54538668	99	+	.	Parent=FBgn0036896.1.mrna1;Target=FBgn0036896.1 150 614 +
Chr1	stalkie_big_nohaplotig	exon	54538730	54538921	98	+	.	Parent=FBgn0036896.1.mrna1;Target=FBgn0036896.1 615 806 +
Chr1	stalkie_big_nohaplotig	exon	54538993	54539646	99	+	.	Parent=FBgn0036896.1.mrna1;Target=FBgn0036896.1 807 1460 +
Chr1	stalkie_big_nohaplotig	exon	54539704	54539857	100	+	.	Parent=FBgn0036896.1.mrna1;Target=FBgn0036896.1 1461 1614 +
Chr1	stalkie_big_nohaplotig	exon	54540797	54541201	100	+	.	Parent=FBgn0036896.1.mrna1;Target=FBgn0036896.1 1615 2019 +
Chr1	stalkie_big_nohaplotig	CDS	54514603	54514751	.	+	0	Parent=FBgn0036896.1.mrna1;Target=FBgn0036896.1 1 149 +
Chr1	stalkie_big_nohaplotig	CDS	54538204	54538668	.	+	1	Parent=FBgn0036896.1.mrna1;Target=FBgn0036896.1 150 614 +
Chr1	stalkie_big_nohaplotig	CDS	54538730	54538921	.	+	1	Parent=FBgn0036896.1.mrna1;Target=FBgn0036896.1 615 806 +
Chr1	stalkie_big_nohaplotig	CDS	54538993	54539646	.	+	1	Parent=FBgn0036896.1.mrna1;Target=FBgn0036896.1 807 1460 +
Chr1	stalkie_big_nohaplotig	CDS	54539704	54539857	.	+	1	Parent=FBgn0036896.1.mrna1;Target=FBgn0036896.1 1461 1614 +
Chr1	stalkie_big_nohaplotig	CDS	54540797	54541201	.	+	0	Parent=FBgn0036896.1.mrna1;Target=FBgn0036896.1 1615 2019 +
Chr1	gffcl	locus	54516463	54517612	.	+	.	ID=RLOC_00008042;geneIDs=comp138772_c1_seq1.path1;transcripts=comp138772_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54516463	54517612	.	+	.	ID=comp138772_c1_seq1.mrna1;geneID=comp138772_c1_seq1.path1;Name=comp138772_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1149;mismatches=1;indels=0;unknowns=0;Target=comp138772_c1_seq1 1150 1 .;CDS_Target=comp138772_c1_seq1 470 381 .;locus=RLOC_00008042
Chr1	stalkie_big_nohaplotig	exon	54516463	54517612	99	+	.	Parent=comp138772_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	54516843	54516932	.	+	0	Parent=comp138772_c1_seq1.mrna1
Chr1	gffcl	locus	54542753	54544079	.	-	.	ID=RLOC_00008043;geneIDs=comp157877_c0_seq1.path1;transcripts=comp157877_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54542753	54544079	.	-	.	ID=comp157877_c0_seq1.mrna1;geneID=comp157877_c0_seq1.path1;Name=comp157877_c0_seq1;Dir=indeterminatecoverage=98.8;identity=100.0;matches=1327;mismatches=0;indels=0;unknowns=0;Target=comp157877_c0_seq1 1327 1 .;CDS_Target=comp157877_c0_seq1 1220 1080 .;locus=RLOC_00008043
Chr1	stalkie_big_nohaplotig	exon	54542753	54544079	100	-	.	Parent=comp157877_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	54542860	54543000	.	-	0	Parent=comp157877_c0_seq1.mrna1
Chr1	gffcl	locus	54544237	54544953	.	+	.	ID=RLOC_00008044;geneIDs=comp145053_c0_seq1.path1;transcripts=comp145053_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54544237	54544953	.	+	.	ID=comp145053_c0_seq1.mrna1;geneID=comp145053_c0_seq1.path1;Name=comp145053_c0_seq1;Dir=indeterminatecoverage=93.2;identity=99.7;matches=715;mismatches=2;indels=0;unknowns=0;Target=comp145053_c0_seq1 717 1 .;CDS_Target=comp145053_c0_seq1 96 1 .;locus=RLOC_00008044
Chr1	stalkie_big_nohaplotig	exon	54544237	54544953	99	+	.	Parent=comp145053_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	54544237	54544332	.	+	0	Parent=comp145053_c0_seq1.mrna1
Chr1	gffcl	locus	54545087	54545785	.	+	.	ID=RLOC_00008045;geneIDs=comp135122_c0_seq1.path1;transcripts=comp135122_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54545087	54545785	.	+	.	ID=comp135122_c0_seq1.mrna1;geneID=comp135122_c0_seq1.path1;Name=comp135122_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=697;mismatches=2;indels=0;unknowns=0;Target=comp135122_c0_seq1 699 1 .;CDS_Target=comp135122_c0_seq1 613 500 .;locus=RLOC_00008045
Chr1	stalkie_big_nohaplotig	exon	54545087	54545785	99	+	.	Parent=comp135122_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	54545586	54545699	.	+	0	Parent=comp135122_c0_seq1.mrna1
Chr1	gffcl	locus	54547022	54547873	.	-	.	ID=RLOC_00008046;geneIDs=FBgn0040371.1.path1;transcripts=FBgn0040371.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54547022	54547873	.	-	.	ID=FBgn0040371.1.mrna1;geneID=FBgn0040371.1.path1;Name=FBgn0040371.1;Dir=indeterminatecoverage=90.2;identity=92.6;matches=792;mismatches=60;indels=3;unknowns=0;Target=FBgn0040371.1 948 94 .;locus=RLOC_00008046
Chr1	stalkie_big_nohaplotig	exon	54547022	54547873	92	-	.	Parent=FBgn0040371.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	54547022	54547873	.	-	0	Parent=FBgn0040371.1.mrna1
Chr1	gffcl	locus	54547973	54550258	.	-	.	ID=RLOC_00008047;geneIDs=FBgn0035598.1.path1;transcripts=FBgn0035598.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54547973	54550258	.	-	.	ID=FBgn0035598.1.mrna1;geneID=FBgn0035598.1.path1;Name=FBgn0035598.1;Dir=sensecoverage=100.0;identity=99.8;matches=2068;mismatches=5;indels=0;unknowns=0;locus=RLOC_00008047
Chr1	stalkie_big_nohaplotig	exon	54547973	54549837	99	-	.	Parent=FBgn0035598.1.mrna1;Target=FBgn0035598.1 209 2073 +
Chr1	stalkie_big_nohaplotig	exon	54549991	54550100	100	-	.	Parent=FBgn0035598.1.mrna1;Target=FBgn0035598.1 99 208 +
Chr1	stalkie_big_nohaplotig	exon	54550161	54550258	97	-	.	Parent=FBgn0035598.1.mrna1;Target=FBgn0035598.1 1 98 +
Chr1	stalkie_big_nohaplotig	CDS	54547973	54549837	.	-	2	Parent=FBgn0035598.1.mrna1;Target=FBgn0035598.1 209 2073 +
Chr1	stalkie_big_nohaplotig	CDS	54549991	54550100	.	-	1	Parent=FBgn0035598.1.mrna1;Target=FBgn0035598.1 99 208 +
Chr1	stalkie_big_nohaplotig	CDS	54550161	54550258	.	-	0	Parent=FBgn0035598.1.mrna1;Target=FBgn0035598.1 1 98 +
Chr1	gffcl	locus	54550894	54551765	.	-	.	ID=RLOC_00008048;geneIDs=FBgn0029094.1.path1;transcripts=FBgn0029094.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54550894	54551765	.	-	.	ID=FBgn0029094.1.mrna1;geneID=FBgn0029094.1.path1;Name=FBgn0029094.1;Dir=sensecoverage=100.0;identity=100.0;matches=801;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008048
Chr1	stalkie_big_nohaplotig	exon	54550894	54551673	100	-	.	Parent=FBgn0029094.1.mrna1;Target=FBgn0029094.1 22 801 +
Chr1	stalkie_big_nohaplotig	exon	54551745	54551765	100	-	.	Parent=FBgn0029094.1.mrna1;Target=FBgn0029094.1 1 21 +
Chr1	stalkie_big_nohaplotig	CDS	54550894	54551673	.	-	0	Parent=FBgn0029094.1.mrna1;Target=FBgn0029094.1 22 801 +
Chr1	stalkie_big_nohaplotig	CDS	54551745	54551765	.	-	0	Parent=FBgn0029094.1.mrna1;Target=FBgn0029094.1 1 21 +
Chr1	gffcl	locus	54554826	54619000	.	.	.	ID=RLOC_00008049;geneIDs=FBgn0035204.1.path1,FBgn0035781.2.path1,FBgn0260655.1.path1,comp162971_c2_seq1.path2;transcripts=FBgn0260655.1.mrna1,comp162971_c2_seq1.mrna2,FBgn0035204.1.mrna1,FBgn0035781.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54554826	54559783	.	+	.	ID=FBgn0260655.1.mrna1;geneID=FBgn0260655.1.path1;Name=FBgn0260655.1;Dir=sensecoverage=100.0;identity=99.8;matches=3921;mismatches=8;indels=0;unknowns=0;locus=RLOC_00008049
Chr1	stalkie_big_nohaplotig	exon	54554826	54555009	100	+	.	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 1 184 +
Chr1	stalkie_big_nohaplotig	exon	54555081	54555242	99	+	.	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 185 346 +
Chr1	stalkie_big_nohaplotig	exon	54555294	54555588	100	+	.	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 347 641 +
Chr1	stalkie_big_nohaplotig	exon	54555639	54555780	100	+	.	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 642 783 +
Chr1	stalkie_big_nohaplotig	exon	54555862	54556029	100	+	.	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 784 951 +
Chr1	stalkie_big_nohaplotig	exon	54556087	54556293	99	+	.	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 952 1158 +
Chr1	stalkie_big_nohaplotig	exon	54556354	54556457	100	+	.	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 1159 1262 +
Chr1	stalkie_big_nohaplotig	exon	54556519	54556603	98	+	.	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 1263 1347 +
Chr1	stalkie_big_nohaplotig	exon	54556662	54556825	100	+	.	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 1348 1511 +
Chr1	stalkie_big_nohaplotig	exon	54556886	54557348	100	+	.	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 1512 1974 +
Chr1	stalkie_big_nohaplotig	exon	54557429	54557572	100	+	.	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 1975 2118 +
Chr1	stalkie_big_nohaplotig	exon	54557661	54557811	100	+	.	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 2119 2269 +
Chr1	stalkie_big_nohaplotig	exon	54557870	54558016	100	+	.	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 2270 2416 +
Chr1	stalkie_big_nohaplotig	exon	54558084	54558548	100	+	.	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 2417 2881 +
Chr1	stalkie_big_nohaplotig	exon	54558612	54559046	100	+	.	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 2882 3316 +
Chr1	stalkie_big_nohaplotig	exon	54559110	54559148	100	+	.	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 3317 3355 +
Chr1	stalkie_big_nohaplotig	exon	54559210	54559783	99	+	.	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 3356 3929 +
Chr1	stalkie_big_nohaplotig	CDS	54554826	54555009	.	+	0	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 1 184 +
Chr1	stalkie_big_nohaplotig	CDS	54555081	54555242	.	+	2	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 185 346 +
Chr1	stalkie_big_nohaplotig	CDS	54555294	54555588	.	+	2	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 347 641 +
Chr1	stalkie_big_nohaplotig	CDS	54555639	54555780	.	+	1	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 642 783 +
Chr1	stalkie_big_nohaplotig	CDS	54555862	54556029	.	+	0	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 784 951 +
Chr1	stalkie_big_nohaplotig	CDS	54556087	54556293	.	+	0	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 952 1158 +
Chr1	stalkie_big_nohaplotig	CDS	54556354	54556457	.	+	0	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 1159 1262 +
Chr1	stalkie_big_nohaplotig	CDS	54556519	54556603	.	+	1	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 1263 1347 +
Chr1	stalkie_big_nohaplotig	CDS	54556662	54556825	.	+	0	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 1348 1511 +
Chr1	stalkie_big_nohaplotig	CDS	54556886	54557348	.	+	1	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 1512 1974 +
Chr1	stalkie_big_nohaplotig	CDS	54557429	54557572	.	+	0	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 1975 2118 +
Chr1	stalkie_big_nohaplotig	CDS	54557661	54557811	.	+	0	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 2119 2269 +
Chr1	stalkie_big_nohaplotig	CDS	54557870	54558016	.	+	2	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 2270 2416 +
Chr1	stalkie_big_nohaplotig	CDS	54558084	54558548	.	+	2	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 2417 2881 +
Chr1	stalkie_big_nohaplotig	CDS	54558612	54559046	.	+	2	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 2882 3316 +
Chr1	stalkie_big_nohaplotig	CDS	54559110	54559148	.	+	2	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 3317 3355 +
Chr1	stalkie_big_nohaplotig	CDS	54559210	54559781	.	+	2	Parent=FBgn0260655.1.mrna1;Target=FBgn0260655.1 3356 3927 +
Chr1	stalkie_big_nohaplotig	mRNA	54559382	54619000	.	+	.	ID=comp162971_c2_seq1.mrna2;geneID=comp162971_c2_seq1.path2;Name=comp162971_c2_seq1;Dir=indeterminatecoverage=23.4;identity=91.9;matches=757;mismatches=27;indels=40;unknowns=0;Target=comp162971_c2_seq1 3383 3051 .;locus=RLOC_00008049
Chr1	stalkie_big_nohaplotig	exon	54559382	54559390	88	+	.	Parent=comp162971_c2_seq1.mrna2;Target=comp162971_c2_seq1 2833 2825 .
Chr1	stalkie_big_nohaplotig	exon	54566659	54566667	100	+	.	Parent=comp162971_c2_seq1.mrna2;Target=comp162971_c2_seq1 2842 2834 .
Chr1	stalkie_big_nohaplotig	exon	54571973	54571993	24	+	.	Parent=comp162971_c2_seq1.mrna2;Target=comp162971_c2_seq1 2913 2856 .
Chr1	stalkie_big_nohaplotig	exon	54572777	54572783	100	+	.	Parent=comp162971_c2_seq1.mrna2;Target=comp162971_c2_seq1 2920 2914 .
Chr1	stalkie_big_nohaplotig	exon	54580600	54580601	100	+	.	Parent=comp162971_c2_seq1.mrna2;Target=comp162971_c2_seq1 2922 2921 .
Chr1	stalkie_big_nohaplotig	exon	54595317	54595324	100	+	.	Parent=comp162971_c2_seq1.mrna2;Target=comp162971_c2_seq1 2930 2923 .
Chr1	stalkie_big_nohaplotig	exon	54600956	54600965	90	+	.	Parent=comp162971_c2_seq1.mrna2;Target=comp162971_c2_seq1 2940 2931 .
Chr1	stalkie_big_nohaplotig	exon	54608418	54608429	66	+	.	Parent=comp162971_c2_seq1.mrna2;Target=comp162971_c2_seq1 2952 2941 .
Chr1	stalkie_big_nohaplotig	exon	54613466	54613474	88	+	.	Parent=comp162971_c2_seq1.mrna2;Target=comp162971_c2_seq1 2961 2953 .
Chr1	stalkie_big_nohaplotig	exon	54616693	54616700	100	+	.	Parent=comp162971_c2_seq1.mrna2;Target=comp162971_c2_seq1 2996 2989 .
Chr1	stalkie_big_nohaplotig	exon	54618310	54619000	97	+	.	Parent=comp162971_c2_seq1.mrna2;Target=comp162971_c2_seq1 3686 2999 .
Chr1	stalkie_big_nohaplotig	CDS	54618362	54618697	.	+	0	Parent=comp162971_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	54565642	54567189	.	-	.	ID=FBgn0035204.1.mrna1;geneID=FBgn0035204.1.path1;Name=FBgn0035204.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1547;mismatches=1;indels=0;unknowns=0;Target=FBgn0035204.1 1548 1 .;locus=RLOC_00008049
Chr1	stalkie_big_nohaplotig	exon	54565642	54567189	99	-	.	Parent=FBgn0035204.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	54565642	54567189	.	-	0	Parent=FBgn0035204.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54616267	54617568	.	+	.	ID=FBgn0035781.2.mrna1;geneID=FBgn0035781.2.path1;Name=FBgn0035781.2;Dir=sensecoverage=99.9;identity=99.8;matches=1239;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008049
Chr1	stalkie_big_nohaplotig	exon	54616267	54617179	99	+	.	Parent=FBgn0035781.2.mrna1;Target=FBgn0035781.2 2 914 +
Chr1	stalkie_big_nohaplotig	exon	54617241	54617568	100	+	.	Parent=FBgn0035781.2.mrna1;Target=FBgn0035781.2 915 1242 +
Chr1	stalkie_big_nohaplotig	CDS	54616269	54617179	.	+	0	Parent=FBgn0035781.2.mrna1;Target=FBgn0035781.2 4 914 +
Chr1	stalkie_big_nohaplotig	CDS	54617241	54617568	.	+	1	Parent=FBgn0035781.2.mrna1;Target=FBgn0035781.2 915 1242 +
Chr1	gffcl	locus	54560025	54560780	.	-	.	ID=RLOC_00008050;geneIDs=FBgn0036893.1.path1;transcripts=FBgn0036893.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54560025	54560780	.	-	.	ID=FBgn0036893.1.mrna1;geneID=FBgn0036893.1.path1;Name=FBgn0036893.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=756;mismatches=0;indels=0;unknowns=0;Target=FBgn0036893.1 756 1 .;locus=RLOC_00008050
Chr1	stalkie_big_nohaplotig	exon	54560025	54560780	100	-	.	Parent=FBgn0036893.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	54560025	54560780	.	-	0	Parent=FBgn0036893.1.mrna1
Chr1	gffcl	locus	54563517	54565189	.	+	.	ID=RLOC_00008051;geneIDs=FBgn0035203.1.path1;transcripts=FBgn0035203.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54563517	54565189	.	+	.	ID=FBgn0035203.1.mrna1;geneID=FBgn0035203.1.path1;Name=FBgn0035203.1;Dir=sensecoverage=100.0;identity=99.7;matches=1256;mismatches=4;indels=0;unknowns=0;locus=RLOC_00008051
Chr1	stalkie_big_nohaplotig	exon	54563517	54563646	98	+	.	Parent=FBgn0035203.1.mrna1;Target=FBgn0035203.1 1 130 +
Chr1	stalkie_big_nohaplotig	exon	54563797	54563918	100	+	.	Parent=FBgn0035203.1.mrna1;Target=FBgn0035203.1 131 252 +
Chr1	stalkie_big_nohaplotig	exon	54563986	54564098	100	+	.	Parent=FBgn0035203.1.mrna1;Target=FBgn0035203.1 253 365 +
Chr1	stalkie_big_nohaplotig	exon	54564159	54564588	99	+	.	Parent=FBgn0035203.1.mrna1;Target=FBgn0035203.1 366 795 +
Chr1	stalkie_big_nohaplotig	exon	54564648	54564833	100	+	.	Parent=FBgn0035203.1.mrna1;Target=FBgn0035203.1 796 981 +
Chr1	stalkie_big_nohaplotig	exon	54564911	54565189	99	+	.	Parent=FBgn0035203.1.mrna1;Target=FBgn0035203.1 982 1260 +
Chr1	stalkie_big_nohaplotig	CDS	54563517	54563646	.	+	0	Parent=FBgn0035203.1.mrna1;Target=FBgn0035203.1 1 130 +
Chr1	stalkie_big_nohaplotig	CDS	54563797	54563918	.	+	2	Parent=FBgn0035203.1.mrna1;Target=FBgn0035203.1 131 252 +
Chr1	stalkie_big_nohaplotig	CDS	54563986	54564098	.	+	0	Parent=FBgn0035203.1.mrna1;Target=FBgn0035203.1 253 365 +
Chr1	stalkie_big_nohaplotig	CDS	54564159	54564588	.	+	1	Parent=FBgn0035203.1.mrna1;Target=FBgn0035203.1 366 795 +
Chr1	stalkie_big_nohaplotig	CDS	54564648	54564833	.	+	0	Parent=FBgn0035203.1.mrna1;Target=FBgn0035203.1 796 981 +
Chr1	stalkie_big_nohaplotig	CDS	54564911	54565189	.	+	0	Parent=FBgn0035203.1.mrna1;Target=FBgn0035203.1 982 1260 +
Chr1	gffcl	locus	54574201	54576389	.	+	.	ID=RLOC_00008052;geneIDs=FBgn0031853.7.path1;transcripts=FBgn0031853.7.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54574201	54576389	.	+	.	ID=FBgn0031853.7.mrna1;geneID=FBgn0031853.7.path1;Name=FBgn0031853.7;Dir=sensecoverage=100.0;identity=99.8;matches=2068;mismatches=5;indels=0;unknowns=0;locus=RLOC_00008052
Chr1	stalkie_big_nohaplotig	exon	54574201	54575464	99	+	.	Parent=FBgn0031853.7.mrna1;Target=FBgn0031853.7 1 1264 +
Chr1	stalkie_big_nohaplotig	exon	54575531	54576300	100	+	.	Parent=FBgn0031853.7.mrna1;Target=FBgn0031853.7 1265 2034 +
Chr1	stalkie_big_nohaplotig	exon	54576351	54576389	100	+	.	Parent=FBgn0031853.7.mrna1;Target=FBgn0031853.7 2035 2073 +
Chr1	stalkie_big_nohaplotig	CDS	54574201	54575464	.	+	0	Parent=FBgn0031853.7.mrna1;Target=FBgn0031853.7 1 1264 +
Chr1	stalkie_big_nohaplotig	CDS	54575531	54576300	.	+	2	Parent=FBgn0031853.7.mrna1;Target=FBgn0031853.7 1265 2034 +
Chr1	stalkie_big_nohaplotig	CDS	54576351	54576389	.	+	0	Parent=FBgn0031853.7.mrna1;Target=FBgn0031853.7 2035 2073 +
Chr1	gffcl	locus	54583655	54586228	.	+	.	ID=RLOC_00008053;geneIDs=FBgn0013995.2.path1;transcripts=FBgn0013995.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54583655	54586228	.	+	.	ID=FBgn0013995.2.mrna1;geneID=FBgn0013995.2.path1;Name=FBgn0013995.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2574;mismatches=0;indels=0;unknowns=0;Target=FBgn0013995.2 2574 1 .;locus=RLOC_00008053
Chr1	stalkie_big_nohaplotig	exon	54583655	54586228	100	+	.	Parent=FBgn0013995.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	54583655	54586228	.	+	0	Parent=FBgn0013995.2.mrna1
Chr1	gffcl	locus	54586350	54586774	.	+	.	ID=RLOC_00008054;geneIDs=comp99038_c0_seq1.path1;transcripts=comp99038_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54586350	54586774	.	+	.	ID=comp99038_c0_seq1.mrna1;geneID=comp99038_c0_seq1.path1;Name=comp99038_c0_seq1;Dir=indeterminatecoverage=95.5;identity=100.0;matches=425;mismatches=0;indels=0;unknowns=0;Target=comp99038_c0_seq1 425 1 .;CDS_Target=comp99038_c0_seq1 148 2 .;locus=RLOC_00008054
Chr1	stalkie_big_nohaplotig	exon	54586350	54586774	100	+	.	Parent=comp99038_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	54586351	54586497	.	+	0	Parent=comp99038_c0_seq1.mrna1
Chr1	gffcl	locus	54716064	54742357	.	-	.	ID=RLOC_00008055;geneIDs=comp158202_c0_seq1.path1;transcripts=comp158202_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54716064	54742357	.	-	.	ID=comp158202_c0_seq1.mrna1;geneID=comp158202_c0_seq1.path1;Name=comp158202_c0_seq1;Dir=sensecoverage=99.9;identity=99.0;matches=1173;mismatches=12;indels=0;unknowns=0;locus=RLOC_00008055
Chr1	stalkie_big_nohaplotig	exon	54716064	54716580	99	-	.	Parent=comp158202_c0_seq1.mrna1;Target=comp158202_c0_seq1 670 1186 +
Chr1	stalkie_big_nohaplotig	exon	54716641	54716783	100	-	.	Parent=comp158202_c0_seq1.mrna1;Target=comp158202_c0_seq1 527 669 +
Chr1	stalkie_big_nohaplotig	exon	54719333	54719519	98	-	.	Parent=comp158202_c0_seq1.mrna1;Target=comp158202_c0_seq1 340 526 +
Chr1	stalkie_big_nohaplotig	exon	54721838	54721942	97	-	.	Parent=comp158202_c0_seq1.mrna1;Target=comp158202_c0_seq1 235 339 +
Chr1	stalkie_big_nohaplotig	exon	54722025	54722083	98	-	.	Parent=comp158202_c0_seq1.mrna1;Target=comp158202_c0_seq1 176 234 +
Chr1	stalkie_big_nohaplotig	exon	54741958	54742035	100	-	.	Parent=comp158202_c0_seq1.mrna1;Target=comp158202_c0_seq1 98 175 +
Chr1	stalkie_big_nohaplotig	exon	54742262	54742357	95	-	.	Parent=comp158202_c0_seq1.mrna1;Target=comp158202_c0_seq1 2 97 +
Chr1	stalkie_big_nohaplotig	CDS	54716204	54716580	.	-	2	Parent=comp158202_c0_seq1.mrna1;Target=comp158202_c0_seq1 670 1046 +
Chr1	stalkie_big_nohaplotig	CDS	54716641	54716770	.	-	0	Parent=comp158202_c0_seq1.mrna1;Target=comp158202_c0_seq1 540 669 +
Chr1	gffcl	locus	54766200	54767090	.	+	.	ID=RLOC_00008057;geneIDs=comp150387_c1_seq1.path1;transcripts=comp150387_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54766200	54767090	.	+	.	ID=comp150387_c1_seq1.mrna1;geneID=comp150387_c1_seq1.path1;Name=comp150387_c1_seq1;Dir=indeterminatecoverage=99.7;identity=99.4;matches=889;mismatches=2;indels=3;unknowns=0;Target=comp150387_c1_seq1 896 3 .;CDS_Target=comp150387_c1_seq1 154 5 .;locus=RLOC_00008057
Chr1	stalkie_big_nohaplotig	exon	54766200	54767090	99	+	.	Parent=comp150387_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	54766202	54766351	.	+	0	Parent=comp150387_c1_seq1.mrna1
Chr1	gffcl	locus	54853652	56776379	.	-	.	ID=RLOC_00008058;geneIDs=comp112406_c0_seq1.path1;transcripts=comp112406_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54853652	56776379	.	-	.	ID=comp112406_c0_seq1.mrna1;geneID=comp112406_c0_seq1.path1;Name=comp112406_c0_seq1;Dir=indeterminatecoverage=84.3;identity=99.8;matches=572;mismatches=1;indels=0;unknowns=0;Target=comp112406_c0_seq1 100 32 .;locus=RLOC_00008058
Chr1	stalkie_big_nohaplotig	exon	54853652	54853659	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 631 624 .
Chr1	stalkie_big_nohaplotig	exon	54856234	54856240	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 623 617 .
Chr1	stalkie_big_nohaplotig	exon	54859906	54859908	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 616 614 .
Chr1	stalkie_big_nohaplotig	exon	54860225	54860229	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 613 609 .
Chr1	stalkie_big_nohaplotig	exon	54867812	54867813	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 608 607 .
Chr1	stalkie_big_nohaplotig	exon	54870318	54870326	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 606 598 .
Chr1	stalkie_big_nohaplotig	exon	54875484	54875490	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 597 591 .
Chr1	stalkie_big_nohaplotig	exon	54879777	54879779	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 590 588 .
Chr1	stalkie_big_nohaplotig	exon	54884108	54884113	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 587 582 .
Chr1	stalkie_big_nohaplotig	exon	54887478	54887484	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 581 575 .
Chr1	stalkie_big_nohaplotig	exon	54892829	54892834	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 574 569 .
Chr1	stalkie_big_nohaplotig	exon	54897827	54897836	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 568 559 .
Chr1	stalkie_big_nohaplotig	exon	54902452	54902454	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 558 556 .
Chr1	stalkie_big_nohaplotig	exon	54902470	54902478	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 548 540 .
Chr1	stalkie_big_nohaplotig	exon	54908845	54908846	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 539 538 .
Chr1	stalkie_big_nohaplotig	exon	54911371	54911379	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 530 522 .
Chr1	stalkie_big_nohaplotig	exon	54913676	54913681	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 521 516 .
Chr1	stalkie_big_nohaplotig	exon	54921510	54921512	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 515 513 .
Chr1	stalkie_big_nohaplotig	exon	54929507	54929513	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 512 506 .
Chr1	stalkie_big_nohaplotig	exon	54943243	54943248	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 504 499 .
Chr1	stalkie_big_nohaplotig	exon	54948554	54948562	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 498 490 .
Chr1	stalkie_big_nohaplotig	exon	54950659	54950660	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 489 488 .
Chr1	stalkie_big_nohaplotig	exon	54952954	54952955	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 487 486 .
Chr1	stalkie_big_nohaplotig	exon	54952971	54952982	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 477 466 .
Chr1	stalkie_big_nohaplotig	exon	54960762	54960764	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 465 463 .
Chr1	stalkie_big_nohaplotig	exon	54961486	54961487	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 462 461 .
Chr1	stalkie_big_nohaplotig	exon	54963924	54963929	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 460 455 .
Chr1	stalkie_big_nohaplotig	exon	54968198	54968199	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 454 453 .
Chr1	stalkie_big_nohaplotig	exon	54970735	54970744	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 452 443 .
Chr1	stalkie_big_nohaplotig	exon	54973926	54973928	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 442 440 .
Chr1	stalkie_big_nohaplotig	exon	54976656	54976658	100	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 439 437 .
Chr1	stalkie_big_nohaplotig	exon	56775980	56776379	99	-	.	Parent=comp112406_c0_seq1.mrna1;Target=comp112406_c0_seq1 431 32 .
Chr1	stalkie_big_nohaplotig	CDS	56776311	56776379	.	-	0	Parent=comp112406_c0_seq1.mrna1
Chr1	gffcl	locus	54900973	54901021	.	+	.	ID=RLOC_00008059;geneIDs=comp116523_c0_seq1.path1;transcripts=comp116523_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54900973	54901021	.	+	.	ID=comp116523_c0_seq1.mrna1;geneID=comp116523_c0_seq1.path1;Name=comp116523_c0_seq1;Dir=indeterminatecoverage=10.2;identity=100.0;matches=49;mismatches=0;indels=0;unknowns=0;Target=comp116523_c0_seq1 50 2 .;locus=RLOC_00008059
Chr1	stalkie_big_nohaplotig	exon	54900973	54901021	100	+	.	Parent=comp116523_c0_seq1.mrna1
Chr1	gffcl	locus	54984177	54984724	.	+	.	ID=RLOC_00008060;geneIDs=comp148254_c0_seq1.path1;transcripts=comp148254_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54984177	54984724	.	+	.	ID=comp148254_c0_seq1.mrna1;geneID=comp148254_c0_seq1.path1;Name=comp148254_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=541;mismatches=2;indels=5;unknowns=0;Target=comp148254_c0_seq1 543 1 .;CDS_Target=comp148254_c0_seq1 374 282 .;locus=RLOC_00008060
Chr1	stalkie_big_nohaplotig	exon	54984177	54984724	98	+	.	Parent=comp148254_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	54984458	54984555	.	+	0	Parent=comp148254_c0_seq1.mrna1
Chr1	gffcl	locus	54991394	55267344	.	-	.	ID=RLOC_00008061;geneIDs=FBgn0052066.1.path1;transcripts=FBgn0052066.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54991394	55267344	.	-	.	ID=FBgn0052066.1.mrna1;geneID=FBgn0052066.1.path1;Name=FBgn0052066.1;Dir=sensecoverage=73.2;identity=95.0;matches=594;mismatches=23;indels=8;unknowns=0;Target=FBgn0052066.1 451 714 +;locus=RLOC_00008061
Chr1	stalkie_big_nohaplotig	exon	54991394	54991657	100	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 451 714 +
Chr1	stalkie_big_nohaplotig	exon	55039557	55039559	100	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 448 450 +
Chr1	stalkie_big_nohaplotig	exon	55047618	55047625	100	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 440 447 +
Chr1	stalkie_big_nohaplotig	exon	55086363	55086368	100	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 434 439 +
Chr1	stalkie_big_nohaplotig	exon	55090970	55090972	100	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 431 433 +
Chr1	stalkie_big_nohaplotig	exon	55096496	55096499	100	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 427 430 +
Chr1	stalkie_big_nohaplotig	exon	55104271	55104275	100	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 422 426 +
Chr1	stalkie_big_nohaplotig	exon	55105921	55105929	100	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 413 421 +
Chr1	stalkie_big_nohaplotig	exon	55108836	55108840	100	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 375 379 +
Chr1	stalkie_big_nohaplotig	exon	55115757	55115817	58	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 314 374 +
Chr1	stalkie_big_nohaplotig	exon	55122822	55122823	100	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 312 313 +
Chr1	stalkie_big_nohaplotig	exon	55129487	55129495	77	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 303 311 +
Chr1	stalkie_big_nohaplotig	exon	55130774	55130777	100	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 299 302 +
Chr1	stalkie_big_nohaplotig	exon	55143663	55143666	100	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 295 298 +
Chr1	stalkie_big_nohaplotig	exon	55166356	55166363	100	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 287 294 +
Chr1	stalkie_big_nohaplotig	exon	55177402	55177404	100	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 284 286 +
Chr1	stalkie_big_nohaplotig	exon	55184118	55184121	100	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 280 283 +
Chr1	stalkie_big_nohaplotig	exon	55196768	55196769	100	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 278 279 +
Chr1	stalkie_big_nohaplotig	exon	55210659	55210667	100	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 269 277 +
Chr1	stalkie_big_nohaplotig	exon	55211360	55211364	100	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 202 206 +
Chr1	stalkie_big_nohaplotig	exon	55213424	55213432	100	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 193 201 +
Chr1	stalkie_big_nohaplotig	exon	55229306	55229311	66	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 187 192 +
Chr1	stalkie_big_nohaplotig	exon	55267159	55267344	100	-	.	Parent=FBgn0052066.1.mrna1;Target=FBgn0052066.1 1 186 +
Chr1	stalkie_big_nohaplotig	CDS	54991394	54991657	.	-	0	Parent=FBgn0052066.1.mrna1
Chr1	gffcl	locus	54995629	54996362	.	+	.	ID=RLOC_00008062;geneIDs=comp112666_c0_seq1.path1;transcripts=comp112666_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	54995629	54996362	.	+	.	ID=comp112666_c0_seq1.mrna1;geneID=comp112666_c0_seq1.path1;Name=comp112666_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=724;mismatches=10;indels=5;unknowns=0;Target=comp112666_c0_seq1 739 1 .;CDS_Target=comp112666_c0_seq1 515 351 .;locus=RLOC_00008062
Chr1	stalkie_big_nohaplotig	exon	54995629	54996362	97	+	.	Parent=comp112666_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	54995974	54996138	.	+	0	Parent=comp112666_c0_seq1.mrna1
Chr1	gffcl	locus	55003220	55004095	.	+	.	ID=RLOC_00008063;geneIDs=FBgn0000565.1.path1;transcripts=FBgn0000565.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55003220	55004095	.	+	.	ID=FBgn0000565.1.mrna1;geneID=FBgn0000565.1.path1;Name=FBgn0000565.1;Dir=sensecoverage=100.0;identity=99.2;matches=771;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008063
Chr1	stalkie_big_nohaplotig	exon	55003220	55003251	100	+	.	Parent=FBgn0000565.1.mrna1;Target=FBgn0000565.1 1 32 +
Chr1	stalkie_big_nohaplotig	exon	55003351	55004095	99	+	.	Parent=FBgn0000565.1.mrna1;Target=FBgn0000565.1 33 777 +
Chr1	stalkie_big_nohaplotig	CDS	55003220	55003251	.	+	0	Parent=FBgn0000565.1.mrna1;Target=FBgn0000565.1 1 32 +
Chr1	stalkie_big_nohaplotig	CDS	55003351	55004095	.	+	1	Parent=FBgn0000565.1.mrna1;Target=FBgn0000565.1 33 777 +
Chr1	gffcl	locus	55048080	55048627	.	+	.	ID=RLOC_00008065;geneIDs=comp148254_c0_seq1.path2;transcripts=comp148254_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	55048080	55048627	.	+	.	ID=comp148254_c0_seq1.mrna2;geneID=comp148254_c0_seq1.path2;Name=comp148254_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=541;mismatches=2;indels=5;unknowns=0;Target=comp148254_c0_seq1 543 1 .;CDS_Target=comp148254_c0_seq1 374 282 .;locus=RLOC_00008065
Chr1	stalkie_big_nohaplotig	exon	55048080	55048627	98	+	.	Parent=comp148254_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	55048361	55048458	.	+	0	Parent=comp148254_c0_seq1.mrna2
Chr1	gffcl	locus	55099427	55167514	.	+	.	ID=RLOC_00008066;geneIDs=FBgn0052062.path1;transcripts=FBgn0052062.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55099427	55167514	.	+	.	ID=FBgn0052062.mrna1;geneID=FBgn0052062.path1;Name=FBgn0052062;Dir=sensecoverage=100.0;identity=99.9;matches=1118;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008066
Chr1	stalkie_big_nohaplotig	exon	55099427	55099519	100	+	.	Parent=FBgn0052062.mrna1;Target=FBgn0052062 1 93 +
Chr1	stalkie_big_nohaplotig	exon	55099672	55099725	100	+	.	Parent=FBgn0052062.mrna1;Target=FBgn0052062 94 147 +
Chr1	stalkie_big_nohaplotig	exon	55115332	55115424	100	+	.	Parent=FBgn0052062.mrna1;Target=FBgn0052062 148 240 +
Chr1	stalkie_big_nohaplotig	exon	55135703	55135757	100	+	.	Parent=FBgn0052062.mrna1;Target=FBgn0052062 241 295 +
Chr1	stalkie_big_nohaplotig	exon	55139627	55139668	100	+	.	Parent=FBgn0052062.mrna1;Target=FBgn0052062 296 337 +
Chr1	stalkie_big_nohaplotig	exon	55145842	55145862	100	+	.	Parent=FBgn0052062.mrna1;Target=FBgn0052062 338 358 +
Chr1	stalkie_big_nohaplotig	exon	55153851	55154268	99	+	.	Parent=FBgn0052062.mrna1;Target=FBgn0052062 359 776 +
Chr1	stalkie_big_nohaplotig	exon	55157870	55157933	100	+	.	Parent=FBgn0052062.mrna1;Target=FBgn0052062 777 840 +
Chr1	stalkie_big_nohaplotig	exon	55164202	55164362	100	+	.	Parent=FBgn0052062.mrna1;Target=FBgn0052062 841 1001 +
Chr1	stalkie_big_nohaplotig	exon	55167397	55167514	100	+	.	Parent=FBgn0052062.mrna1;Target=FBgn0052062 1002 1119 +
Chr1	stalkie_big_nohaplotig	CDS	55099427	55099519	.	+	0	Parent=FBgn0052062.mrna1;Target=FBgn0052062 1 93 +
Chr1	stalkie_big_nohaplotig	CDS	55099672	55099725	.	+	0	Parent=FBgn0052062.mrna1;Target=FBgn0052062 94 147 +
Chr1	stalkie_big_nohaplotig	CDS	55115332	55115424	.	+	0	Parent=FBgn0052062.mrna1;Target=FBgn0052062 148 240 +
Chr1	stalkie_big_nohaplotig	CDS	55135703	55135757	.	+	0	Parent=FBgn0052062.mrna1;Target=FBgn0052062 241 295 +
Chr1	stalkie_big_nohaplotig	CDS	55139627	55139668	.	+	2	Parent=FBgn0052062.mrna1;Target=FBgn0052062 296 337 +
Chr1	stalkie_big_nohaplotig	CDS	55145842	55145862	.	+	2	Parent=FBgn0052062.mrna1;Target=FBgn0052062 338 358 +
Chr1	stalkie_big_nohaplotig	CDS	55153851	55154268	.	+	2	Parent=FBgn0052062.mrna1;Target=FBgn0052062 359 776 +
Chr1	stalkie_big_nohaplotig	CDS	55157870	55157933	.	+	1	Parent=FBgn0052062.mrna1;Target=FBgn0052062 777 840 +
Chr1	stalkie_big_nohaplotig	CDS	55164202	55164362	.	+	0	Parent=FBgn0052062.mrna1;Target=FBgn0052062 841 1001 +
Chr1	stalkie_big_nohaplotig	CDS	55167397	55167514	.	+	1	Parent=FBgn0052062.mrna1;Target=FBgn0052062 1002 1119 +
Chr1	gffcl	locus	55170490	55171095	.	+	.	ID=RLOC_00008067;geneIDs=comp134722_c0_seq1.path1;transcripts=comp134722_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55170490	55171095	.	+	.	ID=comp134722_c0_seq1.mrna1;geneID=comp134722_c0_seq1.path1;Name=comp134722_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.3;matches=603;mismatches=3;indels=1;unknowns=0;Target=comp134722_c0_seq1 617 11 .;CDS_Target=comp134722_c0_seq1 87 13 .;locus=RLOC_00008067
Chr1	stalkie_big_nohaplotig	exon	55170490	55171095	99	+	.	Parent=comp134722_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	55170492	55170566	.	+	0	Parent=comp134722_c0_seq1.mrna1
Chr1	gffcl	locus	55171378	55172885	.	-	.	ID=RLOC_00008068;geneIDs=comp135583_c0_seq1.path1,comp156442_c0_seq1.path1;transcripts=comp156442_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55171378	55172329	.	-	.	ID=comp156442_c0_seq1.mrna1;geneID=comp156442_c0_seq1.path1;Name=comp156442_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.5;matches=947;mismatches=5;indels=0;unknowns=0;Target=comp156442_c0_seq1 957 6 .;CDS_Target=comp156442_c0_seq1 955 866 .;locus=RLOC_00008068
Chr1	stalkie_big_nohaplotig	exon	55171378	55172329	99	-	.	Parent=comp156442_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	55171380	55171469	.	-	0	Parent=comp156442_c0_seq1.mrna1
Chr1	gffcl	locus	55174794	55175899	.	+	.	ID=RLOC_00008069;geneIDs=ORF1760.path1;transcripts=ORF1760.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55174794	55175899	.	+	.	ID=ORF1760.mrna1;geneID=ORF1760.path1;Name=ORF1760;Dir=sensecoverage=100.0;identity=99.0;matches=992;mismatches=10;indels=0;unknowns=0;locus=RLOC_00008069
Chr1	stalkie_big_nohaplotig	exon	55174794	55175019	98	+	.	Parent=ORF1760.mrna1;Target=ORF1760 1 226 +
Chr1	stalkie_big_nohaplotig	exon	55175069	55175207	100	+	.	Parent=ORF1760.mrna1;Target=ORF1760 227 365 +
Chr1	stalkie_big_nohaplotig	exon	55175263	55175899	98	+	.	Parent=ORF1760.mrna1;Target=ORF1760 366 1002 +
Chr1	stalkie_big_nohaplotig	CDS	55174794	55175019	.	+	0	Parent=ORF1760.mrna1;Target=ORF1760 1 226 +
Chr1	stalkie_big_nohaplotig	CDS	55175069	55175207	.	+	2	Parent=ORF1760.mrna1;Target=ORF1760 227 365 +
Chr1	stalkie_big_nohaplotig	CDS	55175263	55175899	.	+	1	Parent=ORF1760.mrna1;Target=ORF1760 366 1002 +
Chr1	gffcl	locus	55176199	55177304	.	-	.	ID=RLOC_00008070;geneIDs=FBgn0035722.1.path1;transcripts=FBgn0035722.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55176199	55177304	.	-	.	ID=FBgn0035722.1.mrna1;geneID=FBgn0035722.1.path1;Name=FBgn0035722.1;Dir=sensecoverage=100.0;identity=99.5;matches=857;mismatches=4;indels=0;unknowns=0;locus=RLOC_00008070
Chr1	stalkie_big_nohaplotig	exon	55176199	55176480	99	-	.	Parent=FBgn0035722.1.mrna1;Target=FBgn0035722.1 580 861 +
Chr1	stalkie_big_nohaplotig	exon	55176546	55176797	99	-	.	Parent=FBgn0035722.1.mrna1;Target=FBgn0035722.1 328 579 +
Chr1	stalkie_big_nohaplotig	exon	55176857	55177090	99	-	.	Parent=FBgn0035722.1.mrna1;Target=FBgn0035722.1 94 327 +
Chr1	stalkie_big_nohaplotig	exon	55177212	55177304	100	-	.	Parent=FBgn0035722.1.mrna1;Target=FBgn0035722.1 1 93 +
Chr1	stalkie_big_nohaplotig	CDS	55176199	55176480	.	-	0	Parent=FBgn0035722.1.mrna1;Target=FBgn0035722.1 580 861 +
Chr1	stalkie_big_nohaplotig	CDS	55176546	55176797	.	-	0	Parent=FBgn0035722.1.mrna1;Target=FBgn0035722.1 328 579 +
Chr1	stalkie_big_nohaplotig	CDS	55176857	55177090	.	-	0	Parent=FBgn0035722.1.mrna1;Target=FBgn0035722.1 94 327 +
Chr1	stalkie_big_nohaplotig	CDS	55177212	55177304	.	-	0	Parent=FBgn0035722.1.mrna1;Target=FBgn0035722.1 1 93 +
Chr1	gffcl	locus	55178506	55181139	.	+	.	ID=RLOC_00008071;geneIDs=FBgn0001179.1.path1;transcripts=FBgn0001179.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55178506	55181139	.	+	.	ID=FBgn0001179.1.mrna1;geneID=FBgn0001179.1.path1;Name=FBgn0001179.1;Dir=sensecoverage=100.0;identity=99.5;matches=2391;mismatches=12;indels=0;unknowns=0;locus=RLOC_00008071
Chr1	stalkie_big_nohaplotig	exon	55178506	55178563	100	+	.	Parent=FBgn0001179.1.mrna1;Target=FBgn0001179.1 1 58 +
Chr1	stalkie_big_nohaplotig	exon	55178620	55179112	99	+	.	Parent=FBgn0001179.1.mrna1;Target=FBgn0001179.1 59 551 +
Chr1	stalkie_big_nohaplotig	exon	55179167	55179714	99	+	.	Parent=FBgn0001179.1.mrna1;Target=FBgn0001179.1 552 1099 +
Chr1	stalkie_big_nohaplotig	exon	55179774	55180543	99	+	.	Parent=FBgn0001179.1.mrna1;Target=FBgn0001179.1 1100 1869 +
Chr1	stalkie_big_nohaplotig	exon	55180606	55181139	99	+	.	Parent=FBgn0001179.1.mrna1;Target=FBgn0001179.1 1870 2403 +
Chr1	stalkie_big_nohaplotig	CDS	55178506	55178563	.	+	0	Parent=FBgn0001179.1.mrna1;Target=FBgn0001179.1 1 58 +
Chr1	stalkie_big_nohaplotig	CDS	55178620	55179112	.	+	2	Parent=FBgn0001179.1.mrna1;Target=FBgn0001179.1 59 551 +
Chr1	stalkie_big_nohaplotig	CDS	55179167	55179714	.	+	1	Parent=FBgn0001179.1.mrna1;Target=FBgn0001179.1 552 1099 +
Chr1	stalkie_big_nohaplotig	CDS	55179774	55180543	.	+	2	Parent=FBgn0001179.1.mrna1;Target=FBgn0001179.1 1100 1869 +
Chr1	stalkie_big_nohaplotig	CDS	55180606	55181139	.	+	0	Parent=FBgn0001179.1.mrna1;Target=FBgn0001179.1 1870 2403 +
Chr1	gffcl	locus	55273801	55280642	.	+	.	ID=RLOC_00008072;geneIDs=FBgn0036096.1.path1;transcripts=FBgn0036096.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55273801	55280642	.	+	.	ID=FBgn0036096.1.mrna1;geneID=FBgn0036096.1.path1;Name=FBgn0036096.1;Dir=sensecoverage=100.0;identity=100.0;matches=1251;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008072
Chr1	stalkie_big_nohaplotig	exon	55273801	55274052	100	+	.	Parent=FBgn0036096.1.mrna1;Target=FBgn0036096.1 1 252 +
Chr1	stalkie_big_nohaplotig	exon	55274137	55274904	100	+	.	Parent=FBgn0036096.1.mrna1;Target=FBgn0036096.1 253 1020 +
Chr1	stalkie_big_nohaplotig	exon	55280412	55280642	100	+	.	Parent=FBgn0036096.1.mrna1;Target=FBgn0036096.1 1021 1251 +
Chr1	stalkie_big_nohaplotig	CDS	55273801	55274052	.	+	0	Parent=FBgn0036096.1.mrna1;Target=FBgn0036096.1 1 252 +
Chr1	stalkie_big_nohaplotig	CDS	55274137	55274904	.	+	0	Parent=FBgn0036096.1.mrna1;Target=FBgn0036096.1 253 1020 +
Chr1	stalkie_big_nohaplotig	CDS	55280412	55280642	.	+	0	Parent=FBgn0036096.1.mrna1;Target=FBgn0036096.1 1021 1251 +
Chr1	gffcl	locus	55275607	55275921	.	-	.	ID=RLOC_00008073;geneIDs=comp62228_c1_seq1.path2;transcripts=comp62228_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	55275607	55275921	.	-	.	ID=comp62228_c1_seq1.mrna2;geneID=comp62228_c1_seq1.path2;Name=comp62228_c1_seq1;Dir=indeterminatecoverage=99.4;identity=91.5;matches=314;mismatches=1;indels=28;unknowns=0;Target=comp62228_c1_seq1 345 3 .;CDS_Target=comp62228_c1_seq1 117 4 .;locus=RLOC_00008073
Chr1	stalkie_big_nohaplotig	exon	55275607	55275921	91	-	.	Parent=comp62228_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	55275807	55275920	.	-	0	Parent=comp62228_c1_seq1.mrna2
Chr1	gffcl	locus	55280901	55281189	.	-	.	ID=RLOC_00008074;geneIDs=comp62228_c1_seq1.path1;transcripts=comp62228_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55280901	55281189	.	-	.	ID=comp62228_c1_seq1.mrna1;geneID=comp62228_c1_seq1.path1;Name=comp62228_c1_seq1;Dir=indeterminatecoverage=84.1;identity=99.3;matches=288;mismatches=1;indels=1;unknowns=0;Target=comp62228_c1_seq1 292 3 .;CDS_Target=comp62228_c1_seq1 117 4 .;locus=RLOC_00008074
Chr1	stalkie_big_nohaplotig	exon	55280901	55281189	99	-	.	Parent=comp62228_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	55281075	55281188	.	-	0	Parent=comp62228_c1_seq1.mrna1
Chr1	gffcl	locus	55287855	55288181	.	+	.	ID=RLOC_00008075;geneIDs=comp129752_c1_seq1.path1;transcripts=comp129752_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55287855	55288181	.	+	.	ID=comp129752_c1_seq1.mrna1;geneID=comp129752_c1_seq1.path1;Name=comp129752_c1_seq1;Dir=indeterminatecoverage=100.0;identity=80.5;matches=318;mismatches=7;indels=70;unknowns=0;Target=comp129752_c1_seq1 393 1 .;CDS_Target=comp129752_c1_seq1 118 2 .;locus=RLOC_00008075
Chr1	stalkie_big_nohaplotig	exon	55287855	55288181	80	+	.	Parent=comp129752_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	55287856	55287965	.	+	0	Parent=comp129752_c1_seq1.mrna1
Chr1	gffcl	locus	55295600	55302195	.	-	.	ID=RLOC_00008076;geneIDs=FBgn0028789.1.path1;transcripts=FBgn0028789.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55295600	55302195	.	-	.	ID=FBgn0028789.1.mrna1;geneID=FBgn0028789.1.path1;Name=FBgn0028789.1;Dir=sensecoverage=100.0;identity=99.8;matches=1353;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008076
Chr1	stalkie_big_nohaplotig	exon	55295600	55296259	100	-	.	Parent=FBgn0028789.1.mrna1;Target=FBgn0028789.1 697 1356 +
Chr1	stalkie_big_nohaplotig	exon	55297082	55297219	100	-	.	Parent=FBgn0028789.1.mrna1;Target=FBgn0028789.1 559 696 +
Chr1	stalkie_big_nohaplotig	exon	55297338	55297605	100	-	.	Parent=FBgn0028789.1.mrna1;Target=FBgn0028789.1 291 558 +
Chr1	stalkie_big_nohaplotig	exon	55299842	55300007	100	-	.	Parent=FBgn0028789.1.mrna1;Target=FBgn0028789.1 125 290 +
Chr1	stalkie_big_nohaplotig	exon	55302072	55302195	97	-	.	Parent=FBgn0028789.1.mrna1;Target=FBgn0028789.1 1 124 +
Chr1	stalkie_big_nohaplotig	CDS	55295600	55296259	.	-	0	Parent=FBgn0028789.1.mrna1;Target=FBgn0028789.1 697 1356 +
Chr1	stalkie_big_nohaplotig	CDS	55297082	55297219	.	-	0	Parent=FBgn0028789.1.mrna1;Target=FBgn0028789.1 559 696 +
Chr1	stalkie_big_nohaplotig	CDS	55297338	55297605	.	-	1	Parent=FBgn0028789.1.mrna1;Target=FBgn0028789.1 291 558 +
Chr1	stalkie_big_nohaplotig	CDS	55299842	55300007	.	-	2	Parent=FBgn0028789.1.mrna1;Target=FBgn0028789.1 125 290 +
Chr1	stalkie_big_nohaplotig	CDS	55302072	55302162	.	-	0	Parent=FBgn0028789.1.mrna1;Target=FBgn0028789.1 34 124 +
Chr1	gffcl	locus	55368960	55383946	.	+	.	ID=RLOC_00008077;geneIDs=FBgn0035956.1.path1;transcripts=FBgn0035956.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55368960	55383946	.	+	.	ID=FBgn0035956.1.mrna1;geneID=FBgn0035956.1.path1;Name=FBgn0035956.1;Dir=sensecoverage=100.0;identity=99.9;matches=1588;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008077
Chr1	stalkie_big_nohaplotig	exon	55368960	55369056	100	+	.	Parent=FBgn0035956.1.mrna1;Target=FBgn0035956.1 1 97 +
Chr1	stalkie_big_nohaplotig	exon	55372545	55372701	99	+	.	Parent=FBgn0035956.1.mrna1;Target=FBgn0035956.1 98 254 +
Chr1	stalkie_big_nohaplotig	exon	55380097	55380364	100	+	.	Parent=FBgn0035956.1.mrna1;Target=FBgn0035956.1 255 522 +
Chr1	stalkie_big_nohaplotig	exon	55382171	55382308	100	+	.	Parent=FBgn0035956.1.mrna1;Target=FBgn0035956.1 523 660 +
Chr1	stalkie_big_nohaplotig	exon	55383017	55383946	99	+	.	Parent=FBgn0035956.1.mrna1;Target=FBgn0035956.1 661 1590 +
Chr1	stalkie_big_nohaplotig	CDS	55368960	55369056	.	+	0	Parent=FBgn0035956.1.mrna1;Target=FBgn0035956.1 1 97 +
Chr1	stalkie_big_nohaplotig	CDS	55372545	55372701	.	+	2	Parent=FBgn0035956.1.mrna1;Target=FBgn0035956.1 98 254 +
Chr1	stalkie_big_nohaplotig	CDS	55380097	55380364	.	+	1	Parent=FBgn0035956.1.mrna1;Target=FBgn0035956.1 255 522 +
Chr1	stalkie_big_nohaplotig	CDS	55382171	55382308	.	+	0	Parent=FBgn0035956.1.mrna1;Target=FBgn0035956.1 523 660 +
Chr1	stalkie_big_nohaplotig	CDS	55383017	55383946	.	+	0	Parent=FBgn0035956.1.mrna1;Target=FBgn0035956.1 661 1590 +
Chr1	gffcl	locus	55380927	55381030	.	-	.	ID=RLOC_00008078;geneIDs=comp140966_c1_seq1.path4;transcripts=comp140966_c1_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	55380927	55381030	.	-	.	ID=comp140966_c1_seq1.mrna4;geneID=comp140966_c1_seq1.path4;Name=comp140966_c1_seq1;Dir=indeterminatecoverage=18.8;identity=87.5;matches=91;mismatches=13;indels=0;unknowns=0;Target=comp140966_c1_seq1 513 410 .;CDS_Target=comp140966_c1_seq1 456 412 .;locus=RLOC_00008078
Chr1	stalkie_big_nohaplotig	exon	55380927	55381030	87	-	.	Parent=comp140966_c1_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	55380984	55381028	.	-	0	Parent=comp140966_c1_seq1.mrna4
Chr1	gffcl	locus	55403709	55405280	.	-	.	ID=RLOC_00008079;geneIDs=ORF771.path1;transcripts=ORF771.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55403709	55405280	.	-	.	ID=ORF771.mrna1;geneID=ORF771.path1;Name=ORF771;Dir=sensecoverage=100.0;identity=98.8;matches=1429;mismatches=17;indels=0;unknowns=0;locus=RLOC_00008079
Chr1	stalkie_big_nohaplotig	exon	55403709	55404611	99	-	.	Parent=ORF771.mrna1;Target=ORF771 544 1446 +
Chr1	stalkie_big_nohaplotig	exon	55404669	55405116	98	-	.	Parent=ORF771.mrna1;Target=ORF771 96 543 +
Chr1	stalkie_big_nohaplotig	exon	55405186	55405280	97	-	.	Parent=ORF771.mrna1;Target=ORF771 1 95 +
Chr1	stalkie_big_nohaplotig	CDS	55403709	55404611	.	-	0	Parent=ORF771.mrna1;Target=ORF771 544 1446 +
Chr1	stalkie_big_nohaplotig	CDS	55404669	55405116	.	-	1	Parent=ORF771.mrna1;Target=ORF771 96 543 +
Chr1	stalkie_big_nohaplotig	CDS	55405186	55405280	.	-	0	Parent=ORF771.mrna1;Target=ORF771 1 95 +
Chr1	gffcl	locus	55409864	55415618	.	-	.	ID=RLOC_00008080;geneIDs=FBgn0035953.1.path1;transcripts=FBgn0035953.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55409864	55415618	.	-	.	ID=FBgn0035953.1.mrna1;geneID=FBgn0035953.1.path1;Name=FBgn0035953.1;Dir=sensecoverage=99.6;identity=99.8;matches=3019;mismatches=7;indels=0;unknowns=0;locus=RLOC_00008080
Chr1	stalkie_big_nohaplotig	exon	55409864	55409948	100	-	.	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 2942 3026 +
Chr1	stalkie_big_nohaplotig	exon	55410425	55411133	100	-	.	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 2233 2941 +
Chr1	stalkie_big_nohaplotig	exon	55411829	55412208	100	-	.	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 1853 2232 +
Chr1	stalkie_big_nohaplotig	exon	55412283	55412401	100	-	.	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 1734 1852 +
Chr1	stalkie_big_nohaplotig	exon	55413190	55413361	100	-	.	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 1562 1733 +
Chr1	stalkie_big_nohaplotig	exon	55413423	55413855	99	-	.	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 1129 1561 +
Chr1	stalkie_big_nohaplotig	exon	55413919	55414014	98	-	.	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 1033 1128 +
Chr1	stalkie_big_nohaplotig	exon	55414071	55414358	99	-	.	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 745 1032 +
Chr1	stalkie_big_nohaplotig	exon	55414690	55414871	100	-	.	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 563 744 +
Chr1	stalkie_big_nohaplotig	exon	55414941	55415011	98	-	.	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 492 562 +
Chr1	stalkie_big_nohaplotig	exon	55415071	55415307	99	-	.	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 255 491 +
Chr1	stalkie_big_nohaplotig	exon	55415365	55415618	100	-	.	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 1 254 +
Chr1	stalkie_big_nohaplotig	CDS	55409866	55409948	.	-	2	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 2942 3024 +
Chr1	stalkie_big_nohaplotig	CDS	55410425	55411133	.	-	0	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 2233 2941 +
Chr1	stalkie_big_nohaplotig	CDS	55411829	55412208	.	-	2	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 1853 2232 +
Chr1	stalkie_big_nohaplotig	CDS	55412283	55412401	.	-	1	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 1734 1852 +
Chr1	stalkie_big_nohaplotig	CDS	55413190	55413361	.	-	2	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 1562 1733 +
Chr1	stalkie_big_nohaplotig	CDS	55413423	55413855	.	-	0	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 1129 1561 +
Chr1	stalkie_big_nohaplotig	CDS	55413919	55414014	.	-	0	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 1033 1128 +
Chr1	stalkie_big_nohaplotig	CDS	55414071	55414358	.	-	0	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 745 1032 +
Chr1	stalkie_big_nohaplotig	CDS	55414690	55414871	.	-	2	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 563 744 +
Chr1	stalkie_big_nohaplotig	CDS	55414941	55415011	.	-	1	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 492 562 +
Chr1	stalkie_big_nohaplotig	CDS	55415071	55415307	.	-	1	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 255 491 +
Chr1	stalkie_big_nohaplotig	CDS	55415365	55415618	.	-	0	Parent=FBgn0035953.1.mrna1;Target=FBgn0035953.1 1 254 +
Chr1	gffcl	locus	55419147	55432492	.	.	.	ID=RLOC_00008081;geneIDs=FBgn0016070.1.path1,comp100538_c0_seq1.path1;transcripts=FBgn0016070.1.mrna1,comp100538_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55419147	55432492	.	+	.	ID=FBgn0016070.1.mrna1;geneID=FBgn0016070.1.path1;Name=FBgn0016070.1;Dir=sensecoverage=100.0;identity=99.8;matches=3033;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008081
Chr1	stalkie_big_nohaplotig	exon	55419147	55419173	96	+	.	Parent=FBgn0016070.1.mrna1;Target=FBgn0016070.1 1 27 +
Chr1	stalkie_big_nohaplotig	exon	55424440	55425119	99	+	.	Parent=FBgn0016070.1.mrna1;Target=FBgn0016070.1 28 707 +
Chr1	stalkie_big_nohaplotig	exon	55425187	55425913	99	+	.	Parent=FBgn0016070.1.mrna1;Target=FBgn0016070.1 708 1434 +
Chr1	stalkie_big_nohaplotig	exon	55425981	55426900	100	+	.	Parent=FBgn0016070.1.mrna1;Target=FBgn0016070.1 1435 2354 +
Chr1	stalkie_big_nohaplotig	exon	55428686	55429331	99	+	.	Parent=FBgn0016070.1.mrna1;Target=FBgn0016070.1 2355 3000 +
Chr1	stalkie_big_nohaplotig	exon	55432454	55432492	100	+	.	Parent=FBgn0016070.1.mrna1;Target=FBgn0016070.1 3001 3039 +
Chr1	stalkie_big_nohaplotig	CDS	55419147	55419173	.	+	0	Parent=FBgn0016070.1.mrna1;Target=FBgn0016070.1 1 27 +
Chr1	stalkie_big_nohaplotig	CDS	55424440	55425119	.	+	0	Parent=FBgn0016070.1.mrna1;Target=FBgn0016070.1 28 707 +
Chr1	stalkie_big_nohaplotig	CDS	55425187	55425913	.	+	1	Parent=FBgn0016070.1.mrna1;Target=FBgn0016070.1 708 1434 +
Chr1	stalkie_big_nohaplotig	CDS	55425981	55426900	.	+	0	Parent=FBgn0016070.1.mrna1;Target=FBgn0016070.1 1435 2354 +
Chr1	stalkie_big_nohaplotig	CDS	55428686	55429331	.	+	1	Parent=FBgn0016070.1.mrna1;Target=FBgn0016070.1 2355 3000 +
Chr1	stalkie_big_nohaplotig	CDS	55432454	55432492	.	+	0	Parent=FBgn0016070.1.mrna1;Target=FBgn0016070.1 3001 3039 +
Chr1	stalkie_big_nohaplotig	mRNA	55432091	55432475	.	-	.	ID=comp100538_c0_seq1.mrna1;geneID=comp100538_c0_seq1.path1;Name=comp100538_c0_seq1;Dir=indeterminatecoverage=94.8;identity=99.5;matches=383;mismatches=0;indels=2;unknowns=0;Target=comp100538_c0_seq1 383 1 .;CDS_Target=comp100538_c0_seq1 105 1 .;locus=RLOC_00008081
Chr1	stalkie_big_nohaplotig	exon	55432091	55432475	99	-	.	Parent=comp100538_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	55432371	55432475	.	-	0	Parent=comp100538_c0_seq1.mrna1
Chr1	gffcl	locus	55434547	55435303	.	-	.	ID=RLOC_00008082;geneIDs=comp142538_c0_seq1.path1;transcripts=comp142538_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55434547	55435303	.	-	.	ID=comp142538_c0_seq1.mrna1;geneID=comp142538_c0_seq1.path1;Name=comp142538_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=752;mismatches=5;indels=0;unknowns=0;Target=comp142538_c0_seq1 757 1 .;CDS_Target=comp142538_c0_seq1 533 411 .;locus=RLOC_00008082
Chr1	stalkie_big_nohaplotig	exon	55434547	55435303	99	-	.	Parent=comp142538_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	55434771	55434893	.	-	0	Parent=comp142538_c0_seq1.mrna1
Chr1	gffcl	locus	55438288	55440737	.	+	.	ID=RLOC_00008083;geneIDs=FBgn0035952.1.path1;transcripts=FBgn0035952.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55438288	55440737	.	+	.	ID=FBgn0035952.1.mrna1;geneID=FBgn0035952.1.path1;Name=FBgn0035952.1;Dir=sensecoverage=100.0;identity=100.0;matches=693;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008083
Chr1	stalkie_big_nohaplotig	exon	55438288	55438435	100	+	.	Parent=FBgn0035952.1.mrna1;Target=FBgn0035952.1 1 148 +
Chr1	stalkie_big_nohaplotig	exon	55438501	55438875	100	+	.	Parent=FBgn0035952.1.mrna1;Target=FBgn0035952.1 149 523 +
Chr1	stalkie_big_nohaplotig	exon	55440568	55440737	100	+	.	Parent=FBgn0035952.1.mrna1;Target=FBgn0035952.1 524 693 +
Chr1	stalkie_big_nohaplotig	CDS	55438288	55438435	.	+	0	Parent=FBgn0035952.1.mrna1;Target=FBgn0035952.1 1 148 +
Chr1	stalkie_big_nohaplotig	CDS	55438501	55438875	.	+	2	Parent=FBgn0035952.1.mrna1;Target=FBgn0035952.1 149 523 +
Chr1	stalkie_big_nohaplotig	CDS	55440568	55440737	.	+	2	Parent=FBgn0035952.1.mrna1;Target=FBgn0035952.1 524 693 +
Chr1	gffcl	locus	55442775	55445552	.	-	.	ID=RLOC_00008084;geneIDs=FBgn0035951.1.path1;transcripts=FBgn0035951.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55442775	55445552	.	-	.	ID=FBgn0035951.1.mrna1;geneID=FBgn0035951.1.path1;Name=FBgn0035951.1;Dir=sensecoverage=100.0;identity=99.9;matches=1205;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008084
Chr1	stalkie_big_nohaplotig	exon	55442775	55442923	100	-	.	Parent=FBgn0035951.1.mrna1;Target=FBgn0035951.1 1058 1206 +
Chr1	stalkie_big_nohaplotig	exon	55444036	55444193	100	-	.	Parent=FBgn0035951.1.mrna1;Target=FBgn0035951.1 900 1057 +
Chr1	stalkie_big_nohaplotig	exon	55444261	55444464	100	-	.	Parent=FBgn0035951.1.mrna1;Target=FBgn0035951.1 696 899 +
Chr1	stalkie_big_nohaplotig	exon	55444522	55444833	100	-	.	Parent=FBgn0035951.1.mrna1;Target=FBgn0035951.1 384 695 +
Chr1	stalkie_big_nohaplotig	exon	55444960	55445069	100	-	.	Parent=FBgn0035951.1.mrna1;Target=FBgn0035951.1 274 383 +
Chr1	stalkie_big_nohaplotig	exon	55445127	55445325	100	-	.	Parent=FBgn0035951.1.mrna1;Target=FBgn0035951.1 75 273 +
Chr1	stalkie_big_nohaplotig	exon	55445479	55445552	98	-	.	Parent=FBgn0035951.1.mrna1;Target=FBgn0035951.1 1 74 +
Chr1	stalkie_big_nohaplotig	CDS	55442775	55442923	.	-	2	Parent=FBgn0035951.1.mrna1;Target=FBgn0035951.1 1058 1206 +
Chr1	stalkie_big_nohaplotig	CDS	55444036	55444193	.	-	1	Parent=FBgn0035951.1.mrna1;Target=FBgn0035951.1 900 1057 +
Chr1	stalkie_big_nohaplotig	CDS	55444261	55444464	.	-	1	Parent=FBgn0035951.1.mrna1;Target=FBgn0035951.1 696 899 +
Chr1	stalkie_big_nohaplotig	CDS	55444522	55444833	.	-	1	Parent=FBgn0035951.1.mrna1;Target=FBgn0035951.1 384 695 +
Chr1	stalkie_big_nohaplotig	CDS	55444960	55445069	.	-	0	Parent=FBgn0035951.1.mrna1;Target=FBgn0035951.1 274 383 +
Chr1	stalkie_big_nohaplotig	CDS	55445127	55445325	.	-	1	Parent=FBgn0035951.1.mrna1;Target=FBgn0035951.1 75 273 +
Chr1	stalkie_big_nohaplotig	CDS	55445479	55445552	.	-	0	Parent=FBgn0035951.1.mrna1;Target=FBgn0035951.1 1 74 +
Chr1	gffcl	locus	55449052	55450685	.	+	.	ID=RLOC_00008085;geneIDs=FBgn0052076.1.path1;transcripts=FBgn0052076.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55449052	55450685	.	+	.	ID=FBgn0052076.1.mrna1;geneID=FBgn0052076.1.path1;Name=FBgn0052076.1;Dir=sensecoverage=100.0;identity=100.0;matches=1377;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008085
Chr1	stalkie_big_nohaplotig	exon	55449052	55449234	100	+	.	Parent=FBgn0052076.1.mrna1;Target=FBgn0052076.1 1 183 +
Chr1	stalkie_big_nohaplotig	exon	55449292	55449616	100	+	.	Parent=FBgn0052076.1.mrna1;Target=FBgn0052076.1 184 508 +
Chr1	stalkie_big_nohaplotig	exon	55449676	55449818	100	+	.	Parent=FBgn0052076.1.mrna1;Target=FBgn0052076.1 509 651 +
Chr1	stalkie_big_nohaplotig	exon	55449891	55450067	100	+	.	Parent=FBgn0052076.1.mrna1;Target=FBgn0052076.1 652 828 +
Chr1	stalkie_big_nohaplotig	exon	55450137	55450685	100	+	.	Parent=FBgn0052076.1.mrna1;Target=FBgn0052076.1 829 1377 +
Chr1	stalkie_big_nohaplotig	CDS	55449052	55449234	.	+	0	Parent=FBgn0052076.1.mrna1;Target=FBgn0052076.1 1 183 +
Chr1	stalkie_big_nohaplotig	CDS	55449292	55449616	.	+	0	Parent=FBgn0052076.1.mrna1;Target=FBgn0052076.1 184 508 +
Chr1	stalkie_big_nohaplotig	CDS	55449676	55449818	.	+	2	Parent=FBgn0052076.1.mrna1;Target=FBgn0052076.1 509 651 +
Chr1	stalkie_big_nohaplotig	CDS	55449891	55450067	.	+	0	Parent=FBgn0052076.1.mrna1;Target=FBgn0052076.1 652 828 +
Chr1	stalkie_big_nohaplotig	CDS	55450137	55450685	.	+	0	Parent=FBgn0052076.1.mrna1;Target=FBgn0052076.1 829 1377 +
Chr1	gffcl	locus	55455529	55461655	.	+	.	ID=RLOC_00008086;geneIDs=FBgn0036143.1.path1;transcripts=FBgn0036143.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55455529	55461655	.	+	.	ID=FBgn0036143.1.mrna1;geneID=FBgn0036143.1.path1;Name=FBgn0036143.1;Dir=sensecoverage=100.0;identity=99.3;matches=1272;mismatches=9;indels=0;unknowns=0;locus=RLOC_00008086
Chr1	stalkie_big_nohaplotig	exon	55455529	55455597	100	+	.	Parent=FBgn0036143.1.mrna1;Target=FBgn0036143.1 1 69 +
Chr1	stalkie_big_nohaplotig	exon	55459754	55459965	99	+	.	Parent=FBgn0036143.1.mrna1;Target=FBgn0036143.1 70 281 +
Chr1	stalkie_big_nohaplotig	exon	55460217	55460388	98	+	.	Parent=FBgn0036143.1.mrna1;Target=FBgn0036143.1 282 453 +
Chr1	stalkie_big_nohaplotig	exon	55460446	55460511	100	+	.	Parent=FBgn0036143.1.mrna1;Target=FBgn0036143.1 454 519 +
Chr1	stalkie_big_nohaplotig	exon	55460606	55460676	100	+	.	Parent=FBgn0036143.1.mrna1;Target=FBgn0036143.1 520 590 +
Chr1	stalkie_big_nohaplotig	exon	55460786	55460936	99	+	.	Parent=FBgn0036143.1.mrna1;Target=FBgn0036143.1 591 741 +
Chr1	stalkie_big_nohaplotig	exon	55460995	55461075	100	+	.	Parent=FBgn0036143.1.mrna1;Target=FBgn0036143.1 742 822 +
Chr1	stalkie_big_nohaplotig	exon	55461197	55461655	98	+	.	Parent=FBgn0036143.1.mrna1;Target=FBgn0036143.1 823 1281 +
Chr1	stalkie_big_nohaplotig	CDS	55455529	55455597	.	+	0	Parent=FBgn0036143.1.mrna1;Target=FBgn0036143.1 1 69 +
Chr1	stalkie_big_nohaplotig	CDS	55459754	55459965	.	+	0	Parent=FBgn0036143.1.mrna1;Target=FBgn0036143.1 70 281 +
Chr1	stalkie_big_nohaplotig	CDS	55460217	55460388	.	+	1	Parent=FBgn0036143.1.mrna1;Target=FBgn0036143.1 282 453 +
Chr1	stalkie_big_nohaplotig	CDS	55460446	55460511	.	+	0	Parent=FBgn0036143.1.mrna1;Target=FBgn0036143.1 454 519 +
Chr1	stalkie_big_nohaplotig	CDS	55460606	55460676	.	+	0	Parent=FBgn0036143.1.mrna1;Target=FBgn0036143.1 520 590 +
Chr1	stalkie_big_nohaplotig	CDS	55460786	55460936	.	+	1	Parent=FBgn0036143.1.mrna1;Target=FBgn0036143.1 591 741 +
Chr1	stalkie_big_nohaplotig	CDS	55460995	55461075	.	+	0	Parent=FBgn0036143.1.mrna1;Target=FBgn0036143.1 742 822 +
Chr1	stalkie_big_nohaplotig	CDS	55461197	55461655	.	+	0	Parent=FBgn0036143.1.mrna1;Target=FBgn0036143.1 823 1281 +
Chr1	gffcl	locus	55456565	55462822	.	-	.	ID=RLOC_00008087;geneIDs=comp118514_c0_seq1.path1;transcripts=comp118514_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55456565	55462822	.	-	.	ID=comp118514_c0_seq1.mrna1;geneID=comp118514_c0_seq1.path1;Name=comp118514_c0_seq1;Dir=indeterminatecoverage=86.2;identity=97.6;matches=163;mismatches=4;indels=0;unknowns=0;Target=comp118514_c0_seq1 53 3 .;locus=RLOC_00008087
Chr1	stalkie_big_nohaplotig	exon	55456565	55456575	90	-	.	Parent=comp118514_c0_seq1.mrna1;Target=comp118514_c0_seq1 175 165 .
Chr1	stalkie_big_nohaplotig	exon	55459009	55459010	100	-	.	Parent=comp118514_c0_seq1.mrna1;Target=comp118514_c0_seq1 164 163 .
Chr1	stalkie_big_nohaplotig	exon	55461319	55461327	88	-	.	Parent=comp118514_c0_seq1.mrna1;Target=comp118514_c0_seq1 153 145 .
Chr1	stalkie_big_nohaplotig	exon	55462679	55462822	98	-	.	Parent=comp118514_c0_seq1.mrna1;Target=comp118514_c0_seq1 144 1 .
Chr1	stalkie_big_nohaplotig	CDS	55462770	55462820	.	-	0	Parent=comp118514_c0_seq1.mrna1
Chr1	gffcl	locus	55464025	55464930	.	-	.	ID=RLOC_00008088;geneIDs=comp154157_c1_seq1.path1;transcripts=comp154157_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55464025	55464930	.	-	.	ID=comp154157_c1_seq1.mrna1;geneID=comp154157_c1_seq1.path1;Name=comp154157_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=902;mismatches=4;indels=0;unknowns=0;Target=comp154157_c1_seq1 906 1 .;CDS_Target=comp154157_c1_seq1 879 778 .;locus=RLOC_00008088
Chr1	stalkie_big_nohaplotig	exon	55464025	55464930	99	-	.	Parent=comp154157_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	55464052	55464153	.	-	0	Parent=comp154157_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55521922	55522627	.	-	.	ID=comp148171_c0_seq1.mrna1;geneID=comp148171_c0_seq1.path1;Name=comp148171_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=608;mismatches=1;indels=1;unknowns=0;Target=comp148171_c0_seq1 372 473 +;locus=RLOC_00008089
Chr1	stalkie_big_nohaplotig	exon	55521922	55521952	100	-	.	Parent=comp148171_c0_seq1.mrna1;Target=comp148171_c0_seq1 580 610 +
Chr1	stalkie_big_nohaplotig	exon	55522050	55522627	99	-	.	Parent=comp148171_c0_seq1.mrna1;Target=comp148171_c0_seq1 1 579 +
Chr1	stalkie_big_nohaplotig	CDS	55522155	55522256	.	-	0	Parent=comp148171_c0_seq1.mrna1
Chr1	gffcl	locus	55533169	55560346	.	-	.	ID=RLOC_00008090;geneIDs=FBgn0036147.1.path1;transcripts=FBgn0036147.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55533169	55560346	.	-	.	ID=FBgn0036147.1.mrna1;geneID=FBgn0036147.1.path1;Name=FBgn0036147.1;Dir=sensecoverage=100.0;identity=99.7;matches=2243;mismatches=7;indels=0;unknowns=0;locus=RLOC_00008090
Chr1	stalkie_big_nohaplotig	exon	55533169	55533450	99	-	.	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 1969 2250 +
Chr1	stalkie_big_nohaplotig	exon	55533511	55533657	100	-	.	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 1822 1968 +
Chr1	stalkie_big_nohaplotig	exon	55533737	55534024	100	-	.	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 1534 1821 +
Chr1	stalkie_big_nohaplotig	exon	55534376	55534502	100	-	.	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 1407 1533 +
Chr1	stalkie_big_nohaplotig	exon	55547681	55547806	100	-	.	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 1281 1406 +
Chr1	stalkie_big_nohaplotig	exon	55547869	55547970	100	-	.	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 1179 1280 +
Chr1	stalkie_big_nohaplotig	exon	55548698	55548819	99	-	.	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 1057 1178 +
Chr1	stalkie_big_nohaplotig	exon	55548887	55549018	100	-	.	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 925 1056 +
Chr1	stalkie_big_nohaplotig	exon	55549081	55549612	99	-	.	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 393 924 +
Chr1	stalkie_big_nohaplotig	exon	55549673	55549812	98	-	.	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 253 392 +
Chr1	stalkie_big_nohaplotig	exon	55556478	55556563	100	-	.	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 167 252 +
Chr1	stalkie_big_nohaplotig	exon	55560181	55560346	100	-	.	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 1 166 +
Chr1	stalkie_big_nohaplotig	CDS	55533169	55533450	.	-	0	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 1969 2250 +
Chr1	stalkie_big_nohaplotig	CDS	55533511	55533657	.	-	0	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 1822 1968 +
Chr1	stalkie_big_nohaplotig	CDS	55533737	55534024	.	-	0	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 1534 1821 +
Chr1	stalkie_big_nohaplotig	CDS	55534376	55534502	.	-	1	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 1407 1533 +
Chr1	stalkie_big_nohaplotig	CDS	55547681	55547806	.	-	1	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 1281 1406 +
Chr1	stalkie_big_nohaplotig	CDS	55547869	55547970	.	-	1	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 1179 1280 +
Chr1	stalkie_big_nohaplotig	CDS	55548698	55548819	.	-	0	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 1057 1178 +
Chr1	stalkie_big_nohaplotig	CDS	55548887	55549018	.	-	0	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 925 1056 +
Chr1	stalkie_big_nohaplotig	CDS	55549081	55549612	.	-	1	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 393 924 +
Chr1	stalkie_big_nohaplotig	CDS	55549673	55549812	.	-	0	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 253 392 +
Chr1	stalkie_big_nohaplotig	CDS	55556478	55556563	.	-	2	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 167 252 +
Chr1	stalkie_big_nohaplotig	CDS	55560181	55560346	.	-	0	Parent=FBgn0036147.1.mrna1;Target=FBgn0036147.1 1 166 +
Chr1	gffcl	locus	55535891	55540120	.	+	.	ID=RLOC_00008091;geneIDs=FBgn0036145.1.path1;transcripts=FBgn0036145.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55535891	55540120	.	+	.	ID=FBgn0036145.1.mrna1;geneID=FBgn0036145.1.path1;Name=FBgn0036145.1;Dir=sensecoverage=100.0;identity=100.0;matches=525;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008091
Chr1	stalkie_big_nohaplotig	exon	55535891	55536002	100	+	.	Parent=FBgn0036145.1.mrna1;Target=FBgn0036145.1 1 112 +
Chr1	stalkie_big_nohaplotig	exon	55536422	55536528	100	+	.	Parent=FBgn0036145.1.mrna1;Target=FBgn0036145.1 113 219 +
Chr1	stalkie_big_nohaplotig	exon	55536596	55536677	100	+	.	Parent=FBgn0036145.1.mrna1;Target=FBgn0036145.1 220 301 +
Chr1	stalkie_big_nohaplotig	exon	55536750	55536817	100	+	.	Parent=FBgn0036145.1.mrna1;Target=FBgn0036145.1 302 369 +
Chr1	stalkie_big_nohaplotig	exon	55537688	55537763	100	+	.	Parent=FBgn0036145.1.mrna1;Target=FBgn0036145.1 370 445 +
Chr1	stalkie_big_nohaplotig	exon	55540041	55540120	100	+	.	Parent=FBgn0036145.1.mrna1;Target=FBgn0036145.1 446 525 +
Chr1	stalkie_big_nohaplotig	CDS	55535891	55536002	.	+	0	Parent=FBgn0036145.1.mrna1;Target=FBgn0036145.1 1 112 +
Chr1	stalkie_big_nohaplotig	CDS	55536422	55536528	.	+	2	Parent=FBgn0036145.1.mrna1;Target=FBgn0036145.1 113 219 +
Chr1	stalkie_big_nohaplotig	CDS	55536596	55536677	.	+	0	Parent=FBgn0036145.1.mrna1;Target=FBgn0036145.1 220 301 +
Chr1	stalkie_big_nohaplotig	CDS	55536750	55536817	.	+	2	Parent=FBgn0036145.1.mrna1;Target=FBgn0036145.1 302 369 +
Chr1	stalkie_big_nohaplotig	CDS	55537688	55537763	.	+	0	Parent=FBgn0036145.1.mrna1;Target=FBgn0036145.1 370 445 +
Chr1	stalkie_big_nohaplotig	CDS	55540041	55540120	.	+	2	Parent=FBgn0036145.1.mrna1;Target=FBgn0036145.1 446 525 +
Chr1	gffcl	locus	55543596	55544298	.	+	.	ID=RLOC_00008092;geneIDs=FBgn0036146.1.path1;transcripts=FBgn0036146.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55543596	55544298	.	+	.	ID=FBgn0036146.1.mrna1;geneID=FBgn0036146.1.path1;Name=FBgn0036146.1;Dir=sensecoverage=100.0;identity=100.0;matches=483;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008092
Chr1	stalkie_big_nohaplotig	exon	55543596	55543700	100	+	.	Parent=FBgn0036146.1.mrna1;Target=FBgn0036146.1 1 105 +
Chr1	stalkie_big_nohaplotig	exon	55543765	55543836	100	+	.	Parent=FBgn0036146.1.mrna1;Target=FBgn0036146.1 106 177 +
Chr1	stalkie_big_nohaplotig	exon	55543921	55544070	100	+	.	Parent=FBgn0036146.1.mrna1;Target=FBgn0036146.1 178 327 +
Chr1	stalkie_big_nohaplotig	exon	55544143	55544298	100	+	.	Parent=FBgn0036146.1.mrna1;Target=FBgn0036146.1 328 483 +
Chr1	stalkie_big_nohaplotig	CDS	55543596	55543700	.	+	0	Parent=FBgn0036146.1.mrna1;Target=FBgn0036146.1 1 105 +
Chr1	stalkie_big_nohaplotig	CDS	55543765	55543836	.	+	0	Parent=FBgn0036146.1.mrna1;Target=FBgn0036146.1 106 177 +
Chr1	stalkie_big_nohaplotig	CDS	55543921	55544070	.	+	0	Parent=FBgn0036146.1.mrna1;Target=FBgn0036146.1 178 327 +
Chr1	stalkie_big_nohaplotig	CDS	55544143	55544298	.	+	0	Parent=FBgn0036146.1.mrna1;Target=FBgn0036146.1 328 483 +
Chr1	gffcl	locus	55563309	55566989	.	-	.	ID=RLOC_00008093;geneIDs=FBgn0061469.1.path1;transcripts=FBgn0061469.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55563309	55566989	.	-	.	ID=FBgn0061469.1.mrna1;geneID=FBgn0061469.1.path1;Name=FBgn0061469.1;Dir=sensecoverage=100.0;identity=99.7;matches=3015;mismatches=9;indels=0;unknowns=0;locus=RLOC_00008093
Chr1	stalkie_big_nohaplotig	exon	55563309	55563644	99	-	.	Parent=FBgn0061469.1.mrna1;Target=FBgn0061469.1 2689 3024 +
Chr1	stalkie_big_nohaplotig	exon	55563711	55564203	99	-	.	Parent=FBgn0061469.1.mrna1;Target=FBgn0061469.1 2196 2688 +
Chr1	stalkie_big_nohaplotig	exon	55564270	55564451	100	-	.	Parent=FBgn0061469.1.mrna1;Target=FBgn0061469.1 2014 2195 +
Chr1	stalkie_big_nohaplotig	exon	55564550	55564758	100	-	.	Parent=FBgn0061469.1.mrna1;Target=FBgn0061469.1 1805 2013 +
Chr1	stalkie_big_nohaplotig	exon	55564821	55565127	99	-	.	Parent=FBgn0061469.1.mrna1;Target=FBgn0061469.1 1498 1804 +
Chr1	stalkie_big_nohaplotig	exon	55565201	55565442	99	-	.	Parent=FBgn0061469.1.mrna1;Target=FBgn0061469.1 1256 1497 +
Chr1	stalkie_big_nohaplotig	exon	55565603	55566450	99	-	.	Parent=FBgn0061469.1.mrna1;Target=FBgn0061469.1 408 1255 +
Chr1	stalkie_big_nohaplotig	exon	55566516	55566842	99	-	.	Parent=FBgn0061469.1.mrna1;Target=FBgn0061469.1 81 407 +
Chr1	stalkie_big_nohaplotig	exon	55566910	55566989	100	-	.	Parent=FBgn0061469.1.mrna1;Target=FBgn0061469.1 1 80 +
Chr1	stalkie_big_nohaplotig	CDS	55563309	55563644	.	-	0	Parent=FBgn0061469.1.mrna1;Target=FBgn0061469.1 2689 3024 +
Chr1	stalkie_big_nohaplotig	CDS	55563711	55564203	.	-	1	Parent=FBgn0061469.1.mrna1;Target=FBgn0061469.1 2196 2688 +
Chr1	stalkie_big_nohaplotig	CDS	55564270	55564451	.	-	0	Parent=FBgn0061469.1.mrna1;Target=FBgn0061469.1 2014 2195 +
Chr1	stalkie_big_nohaplotig	CDS	55564550	55564758	.	-	2	Parent=FBgn0061469.1.mrna1;Target=FBgn0061469.1 1805 2013 +
Chr1	stalkie_big_nohaplotig	CDS	55564821	55565127	.	-	0	Parent=FBgn0061469.1.mrna1;Target=FBgn0061469.1 1498 1804 +
Chr1	stalkie_big_nohaplotig	CDS	55565201	55565442	.	-	2	Parent=FBgn0061469.1.mrna1;Target=FBgn0061469.1 1256 1497 +
Chr1	stalkie_big_nohaplotig	CDS	55565603	55566450	.	-	1	Parent=FBgn0061469.1.mrna1;Target=FBgn0061469.1 408 1255 +
Chr1	stalkie_big_nohaplotig	CDS	55566516	55566842	.	-	1	Parent=FBgn0061469.1.mrna1;Target=FBgn0061469.1 81 407 +
Chr1	stalkie_big_nohaplotig	CDS	55566910	55566989	.	-	0	Parent=FBgn0061469.1.mrna1;Target=FBgn0061469.1 1 80 +
Chr1	gffcl	locus	55569209	55572174	.	+	.	ID=RLOC_00008094;geneIDs=FBgn0064766.1.path1;transcripts=FBgn0064766.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55569209	55572174	.	+	.	ID=FBgn0064766.1.mrna1;geneID=FBgn0064766.1.path1;Name=FBgn0064766.1;Dir=sensecoverage=100.0;identity=99.7;matches=2900;mismatches=10;indels=0;unknowns=0;locus=RLOC_00008094
Chr1	stalkie_big_nohaplotig	exon	55569209	55571030	99	+	.	Parent=FBgn0064766.1.mrna1;Target=FBgn0064766.1 1 1822 +
Chr1	stalkie_big_nohaplotig	exon	55571087	55572174	99	+	.	Parent=FBgn0064766.1.mrna1;Target=FBgn0064766.1 1823 2910 +
Chr1	stalkie_big_nohaplotig	CDS	55569209	55571030	.	+	0	Parent=FBgn0064766.1.mrna1;Target=FBgn0064766.1 1 1822 +
Chr1	stalkie_big_nohaplotig	CDS	55571087	55572174	.	+	2	Parent=FBgn0064766.1.mrna1;Target=FBgn0064766.1 1823 2910 +
Chr1	gffcl	locus	55576504	55577123	.	+	.	ID=RLOC_00008095;geneIDs=comp144589_c0_seq1.path1;transcripts=comp144589_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55576504	55577123	.	+	.	ID=comp144589_c0_seq1.mrna1;geneID=comp144589_c0_seq1.path1;Name=comp144589_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=618;mismatches=2;indels=2;unknowns=0;Target=comp144589_c0_seq1 622 1 .;CDS_Target=comp144589_c0_seq1 53 3 .;locus=RLOC_00008095
Chr1	stalkie_big_nohaplotig	exon	55576504	55577123	99	+	.	Parent=comp144589_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	55576506	55576556	.	+	0	Parent=comp144589_c0_seq1.mrna1
Chr1	gffcl	locus	55577679	55595054	.	+	.	ID=RLOC_00008096;geneIDs=FBgn0261553.1.path1;transcripts=FBgn0261553.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55577679	55595054	.	+	.	ID=FBgn0261553.1.mrna1;geneID=FBgn0261553.1.path1;Name=FBgn0261553.1;Dir=sensecoverage=100.0;identity=99.9;matches=4122;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008096
Chr1	stalkie_big_nohaplotig	exon	55577679	55578189	100	+	.	Parent=FBgn0261553.1.mrna1;Target=FBgn0261553.1 1 511 +
Chr1	stalkie_big_nohaplotig	exon	55591375	55594803	99	+	.	Parent=FBgn0261553.1.mrna1;Target=FBgn0261553.1 512 3940 +
Chr1	stalkie_big_nohaplotig	exon	55594867	55595054	100	+	.	Parent=FBgn0261553.1.mrna1;Target=FBgn0261553.1 3941 4128 +
Chr1	stalkie_big_nohaplotig	CDS	55577679	55578189	.	+	0	Parent=FBgn0261553.1.mrna1;Target=FBgn0261553.1 1 511 +
Chr1	stalkie_big_nohaplotig	CDS	55591375	55594803	.	+	2	Parent=FBgn0261553.1.mrna1;Target=FBgn0261553.1 512 3940 +
Chr1	stalkie_big_nohaplotig	CDS	55594867	55595054	.	+	2	Parent=FBgn0261553.1.mrna1;Target=FBgn0261553.1 3941 4128 +
Chr1	gffcl	locus	55598639	55599167	.	-	.	ID=RLOC_00008097;geneIDs=comp141687_c0_seq1.path1;transcripts=comp141687_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55598639	55599167	.	-	.	ID=comp141687_c0_seq1.mrna1;geneID=comp141687_c0_seq1.path1;Name=comp141687_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=525;mismatches=4;indels=0;unknowns=0;Target=comp141687_c0_seq1 529 1 .;CDS_Target=comp141687_c0_seq1 443 387 .;locus=RLOC_00008097
Chr1	stalkie_big_nohaplotig	exon	55598639	55599167	99	-	.	Parent=comp141687_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	55598725	55598781	.	-	0	Parent=comp141687_c0_seq1.mrna1
Chr1	gffcl	locus	55663551	55664288	.	+	.	ID=RLOC_00008099;geneIDs=FBgn0036152.path1;transcripts=FBgn0036152.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55663551	55664288	.	+	.	ID=FBgn0036152.mrna1;geneID=FBgn0036152.path1;Name=FBgn0036152;Dir=indeterminatecoverage=100.0;identity=99.9;matches=737;mismatches=1;indels=0;unknowns=0;Target=FBgn0036152 738 1 .;locus=RLOC_00008099
Chr1	stalkie_big_nohaplotig	exon	55663551	55664288	99	+	.	Parent=FBgn0036152.mrna1
Chr1	stalkie_big_nohaplotig	CDS	55663551	55664288	.	+	0	Parent=FBgn0036152.mrna1
Chr1	gffcl	locus	55664344	55668007	.	.	.	ID=RLOC_00008100;geneIDs=comp141764_c0_seq1.path1,comp142490_c0_seq1.path1;transcripts=comp142490_c0_seq1.mrna1,comp141764_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55664344	55668007	.	+	.	ID=comp142490_c0_seq1.mrna1;geneID=comp142490_c0_seq1.path1;Name=comp142490_c0_seq1;Dir=sensecoverage=100.0;identity=97.9;matches=856;mismatches=4;indels=14;unknowns=0;locus=RLOC_00008100
Chr1	stalkie_big_nohaplotig	exon	55664344	55664435	100	+	.	Parent=comp142490_c0_seq1.mrna1;Target=comp142490_c0_seq1 1 92 +
Chr1	stalkie_big_nohaplotig	exon	55665041	55665112	100	+	.	Parent=comp142490_c0_seq1.mrna1;Target=comp142490_c0_seq1 93 164 +
Chr1	stalkie_big_nohaplotig	exon	55667298	55668007	97	+	.	Parent=comp142490_c0_seq1.mrna1;Target=comp142490_c0_seq1 165 860 +
Chr1	stalkie_big_nohaplotig	CDS	55664346	55664435	.	+	0	Parent=comp142490_c0_seq1.mrna1;Target=comp142490_c0_seq1 3 92 +
Chr1	stalkie_big_nohaplotig	CDS	55665041	55665112	.	+	0	Parent=comp142490_c0_seq1.mrna1;Target=comp142490_c0_seq1 93 164 +
Chr1	stalkie_big_nohaplotig	CDS	55667298	55667714	.	+	0	Parent=comp142490_c0_seq1.mrna1;Target=comp142490_c0_seq1 165 581 +
Chr1	stalkie_big_nohaplotig	mRNA	55664412	55665063	.	-	.	ID=comp141764_c0_seq1.mrna1;geneID=comp141764_c0_seq1.path1;Name=comp141764_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=652;mismatches=0;indels=0;unknowns=0;Target=comp141764_c0_seq1 652 1 .;CDS_Target=comp141764_c0_seq1 330 139 .;locus=RLOC_00008100
Chr1	stalkie_big_nohaplotig	exon	55664412	55665063	100	-	.	Parent=comp141764_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	55664734	55664925	.	-	0	Parent=comp141764_c0_seq1.mrna1
Chr1	gffcl	locus	55815602	55817301	.	+	.	ID=RLOC_00008101;geneIDs=comp157181_c0_seq1.path1;transcripts=comp157181_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55815602	55817301	.	+	.	ID=comp157181_c0_seq1.mrna1;geneID=comp157181_c0_seq1.path1;Name=comp157181_c0_seq1;Dir=antisensecoverage=99.9;identity=99.7;matches=1172;mismatches=4;indels=0;unknowns=0;locus=RLOC_00008101
Chr1	stalkie_big_nohaplotig	exon	55815602	55815753	100	+	.	Parent=comp157181_c0_seq1.mrna1;Target=comp157181_c0_seq1 1025 1176 -
Chr1	stalkie_big_nohaplotig	exon	55816278	55817301	99	+	.	Parent=comp157181_c0_seq1.mrna1;Target=comp157181_c0_seq1 1 1024 -
Chr1	stalkie_big_nohaplotig	CDS	55815603	55815753	.	+	0	Parent=comp157181_c0_seq1.mrna1;Target=comp157181_c0_seq1 1025 1175 .
Chr1	stalkie_big_nohaplotig	CDS	55816278	55816834	.	+	2	Parent=comp157181_c0_seq1.mrna1;Target=comp157181_c0_seq1 468 1024 .
Chr1	gffcl	locus	55869102	55869774	.	+	.	ID=RLOC_00008102;geneIDs=comp153923_c0_seq1.path1;transcripts=comp153923_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55869102	55869774	.	+	.	ID=comp153923_c0_seq1.mrna1;geneID=comp153923_c0_seq1.path1;Name=comp153923_c0_seq1;Dir=sensecoverage=98.7;identity=99.8;matches=611;mismatches=1;indels=0;unknowns=0;Target=comp153923_c0_seq1 106 378 +;locus=RLOC_00008102
Chr1	stalkie_big_nohaplotig	exon	55869102	55869641	99	+	.	Parent=comp153923_c0_seq1.mrna1;Target=comp153923_c0_seq1 8 547 +
Chr1	stalkie_big_nohaplotig	exon	55869703	55869774	100	+	.	Parent=comp153923_c0_seq1.mrna1;Target=comp153923_c0_seq1 548 619 +
Chr1	stalkie_big_nohaplotig	CDS	55869200	55869472	.	+	0	Parent=comp153923_c0_seq1.mrna1
Chr1	gffcl	locus	55879258	55879930	.	+	.	ID=RLOC_00008103;geneIDs=comp153923_c0_seq1.path2;transcripts=comp153923_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	55879258	55879930	.	+	.	ID=comp153923_c0_seq1.mrna2;geneID=comp153923_c0_seq1.path2;Name=comp153923_c0_seq1;Dir=sensecoverage=98.7;identity=99.8;matches=611;mismatches=1;indels=0;unknowns=0;Target=comp153923_c0_seq1 106 378 +;locus=RLOC_00008103
Chr1	stalkie_big_nohaplotig	exon	55879258	55879797	99	+	.	Parent=comp153923_c0_seq1.mrna2;Target=comp153923_c0_seq1 8 547 +
Chr1	stalkie_big_nohaplotig	exon	55879859	55879930	100	+	.	Parent=comp153923_c0_seq1.mrna2;Target=comp153923_c0_seq1 548 619 +
Chr1	stalkie_big_nohaplotig	CDS	55879356	55879628	.	+	0	Parent=comp153923_c0_seq1.mrna2
Chr1	gffcl	locus	55986991	55987568	.	+	.	ID=RLOC_00008104;geneIDs=comp137983_c0_seq1.path1;transcripts=comp137983_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	55986991	55987568	.	+	.	ID=comp137983_c0_seq1.mrna1;geneID=comp137983_c0_seq1.path1;Name=comp137983_c0_seq1;Dir=indeterminatecoverage=93.6;identity=95.2;matches=550;mismatches=20;indels=8;unknowns=0;Target=comp137983_c0_seq1 609 40 .;CDS_Target=comp137983_c0_seq1 246 163 .;locus=RLOC_00008104
Chr1	stalkie_big_nohaplotig	exon	55986991	55987568	95	+	.	Parent=comp137983_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	55987122	55987205	.	+	0	Parent=comp137983_c0_seq1.mrna1
Chr1	gffcl	locus	56039246	56040220	.	-	.	ID=RLOC_00008105;geneIDs=FBgn0039674.1.path1;transcripts=FBgn0039674.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56039246	56040220	.	-	.	ID=FBgn0039674.1.mrna1;geneID=FBgn0039674.1.path1;Name=FBgn0039674.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=972;mismatches=3;indels=0;unknowns=0;Target=FBgn0039674.1 975 1 .;locus=RLOC_00008105
Chr1	stalkie_big_nohaplotig	exon	56039246	56040220	99	-	.	Parent=FBgn0039674.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	56039246	56040220	.	-	0	Parent=FBgn0039674.1.mrna1
Chr1	gffcl	locus	56041880	56044742	.	+	.	ID=RLOC_00008106;geneIDs=ORF156.path1;transcripts=ORF156.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56041880	56044742	.	+	.	ID=ORF156.mrna1;geneID=ORF156.path1;Name=ORF156;Dir=sensecoverage=100.0;identity=99.9;matches=2725;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008106
Chr1	stalkie_big_nohaplotig	exon	56041880	56042543	99	+	.	Parent=ORF156.mrna1;Target=ORF156 1 664 +
Chr1	stalkie_big_nohaplotig	exon	56042607	56042752	100	+	.	Parent=ORF156.mrna1;Target=ORF156 665 810 +
Chr1	stalkie_big_nohaplotig	exon	56042826	56044742	100	+	.	Parent=ORF156.mrna1;Target=ORF156 811 2727 +
Chr1	stalkie_big_nohaplotig	CDS	56041880	56042543	.	+	0	Parent=ORF156.mrna1;Target=ORF156 1 664 +
Chr1	stalkie_big_nohaplotig	CDS	56042607	56042752	.	+	2	Parent=ORF156.mrna1;Target=ORF156 665 810 +
Chr1	stalkie_big_nohaplotig	CDS	56042826	56044742	.	+	0	Parent=ORF156.mrna1;Target=ORF156 811 2727 +
Chr1	gffcl	locus	56045473	56045861	.	+	.	ID=RLOC_00008107;geneIDs=comp102009_c0_seq1.path1;transcripts=comp102009_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56045473	56045861	.	+	.	ID=comp102009_c0_seq1.mrna1;geneID=comp102009_c0_seq1.path1;Name=comp102009_c0_seq1;Dir=indeterminatecoverage=95.8;identity=97.7;matches=380;mismatches=9;indels=0;unknowns=0;Target=comp102009_c0_seq1 405 17 .;CDS_Target=comp102009_c0_seq1 104 18 .;locus=RLOC_00008107
Chr1	stalkie_big_nohaplotig	exon	56045473	56045861	97	+	.	Parent=comp102009_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	56045474	56045560	.	+	0	Parent=comp102009_c0_seq1.mrna1
Chr1	gffcl	locus	56053654	57458296	.	-	.	ID=RLOC_00008108;geneIDs=comp117844_c0_seq1.path1;transcripts=comp117844_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56053654	57458296	.	-	.	ID=comp117844_c0_seq1.mrna1;geneID=comp117844_c0_seq1.path1;Name=comp117844_c0_seq1;Dir=indeterminatecoverage=75.6;identity=97.4;matches=411;mismatches=3;indels=8;unknowns=0;Target=comp117844_c0_seq1 287 6 .;locus=RLOC_00008108
Chr1	stalkie_big_nohaplotig	exon	56053654	56053661	100	-	.	Parent=comp117844_c0_seq1.mrna1;Target=comp117844_c0_seq1 462 455 .
Chr1	stalkie_big_nohaplotig	exon	56061423	56061432	100	-	.	Parent=comp117844_c0_seq1.mrna1;Target=comp117844_c0_seq1 417 408 .
Chr1	stalkie_big_nohaplotig	exon	56063763	56063773	100	-	.	Parent=comp117844_c0_seq1.mrna1;Target=comp117844_c0_seq1 407 397 .
Chr1	stalkie_big_nohaplotig	exon	56068396	56068402	100	-	.	Parent=comp117844_c0_seq1.mrna1;Target=comp117844_c0_seq1 396 390 .
Chr1	stalkie_big_nohaplotig	exon	56069604	56069606	100	-	.	Parent=comp117844_c0_seq1.mrna1;Target=comp117844_c0_seq1 389 387 .
Chr1	stalkie_big_nohaplotig	exon	56072952	56072957	100	-	.	Parent=comp117844_c0_seq1.mrna1;Target=comp117844_c0_seq1 386 381 .
Chr1	stalkie_big_nohaplotig	exon	56079607	56079627	62	-	.	Parent=comp117844_c0_seq1.mrna1;Target=comp117844_c0_seq1 380 352 .
Chr1	stalkie_big_nohaplotig	exon	56082117	56082119	100	-	.	Parent=comp117844_c0_seq1.mrna1;Target=comp117844_c0_seq1 351 349 .
Chr1	stalkie_big_nohaplotig	exon	56087691	56087692	100	-	.	Parent=comp117844_c0_seq1.mrna1;Target=comp117844_c0_seq1 348 347 .
Chr1	stalkie_big_nohaplotig	exon	56093075	56093085	100	-	.	Parent=comp117844_c0_seq1.mrna1;Target=comp117844_c0_seq1 346 336 .
Chr1	stalkie_big_nohaplotig	exon	56117629	56117640	100	-	.	Parent=comp117844_c0_seq1.mrna1;Target=comp117844_c0_seq1 335 324 .
Chr1	stalkie_big_nohaplotig	exon	56120106	56120109	100	-	.	Parent=comp117844_c0_seq1.mrna1;Target=comp117844_c0_seq1 323 320 .
Chr1	stalkie_big_nohaplotig	exon	56123302	56123309	100	-	.	Parent=comp117844_c0_seq1.mrna1;Target=comp117844_c0_seq1 319 312 .
Chr1	stalkie_big_nohaplotig	exon	56128810	56128815	100	-	.	Parent=comp117844_c0_seq1.mrna1;Target=comp117844_c0_seq1 311 306 .
Chr1	stalkie_big_nohaplotig	exon	56136550	56136554	100	-	.	Parent=comp117844_c0_seq1.mrna1;Target=comp117844_c0_seq1 305 301 .
Chr1	stalkie_big_nohaplotig	exon	56143713	56143716	100	-	.	Parent=comp117844_c0_seq1.mrna1;Target=comp117844_c0_seq1 300 297 .
Chr1	stalkie_big_nohaplotig	exon	56148099	56148103	100	-	.	Parent=comp117844_c0_seq1.mrna1;Target=comp117844_c0_seq1 296 292 .
Chr1	stalkie_big_nohaplotig	exon	57458010	57458296	100	-	.	Parent=comp117844_c0_seq1.mrna1;Target=comp117844_c0_seq1 291 5 .
Chr1	stalkie_big_nohaplotig	CDS	57458014	57458295	.	-	0	Parent=comp117844_c0_seq1.mrna1
Chr1	gffcl	locus	56179456	56179981	.	+	.	ID=RLOC_00008109;geneIDs=comp142670_c0_seq1.path1;transcripts=comp142670_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56179456	56179981	.	+	.	ID=comp142670_c0_seq1.mrna1;geneID=comp142670_c0_seq1.path1;Name=comp142670_c0_seq1;Dir=antisensecoverage=99.8;identity=97.1;matches=436;mismatches=10;indels=3;unknowns=0;Target=comp142670_c0_seq1 361 450 .;locus=RLOC_00008109
Chr1	stalkie_big_nohaplotig	exon	56179456	56179650	93	+	.	Parent=comp142670_c0_seq1.mrna1;Target=comp142670_c0_seq1 254 450 -
Chr1	stalkie_big_nohaplotig	exon	56179731	56179981	99	+	.	Parent=comp142670_c0_seq1.mrna1;Target=comp142670_c0_seq1 2 253 -
Chr1	stalkie_big_nohaplotig	CDS	56179456	56179543	.	+	0	Parent=comp142670_c0_seq1.mrna1
Chr1	gffcl	locus	56254514	56254862	.	+	.	ID=RLOC_00008110;geneIDs=comp114971_c0_seq1.path1;transcripts=comp114971_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56254514	56254862	.	+	.	ID=comp114971_c0_seq1.mrna1;geneID=comp114971_c0_seq1.path1;Name=comp114971_c0_seq1;Dir=indeterminatecoverage=93.3;identity=93.4;matches=326;mismatches=23;indels=0;unknowns=0;Target=comp114971_c0_seq1 356 8 .;CDS_Target=comp114971_c0_seq1 242 198 .;locus=RLOC_00008110
Chr1	stalkie_big_nohaplotig	exon	56254514	56254862	93	+	.	Parent=comp114971_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	56254704	56254748	.	+	0	Parent=comp114971_c0_seq1.mrna1
Chr1	gffcl	locus	56267603	56268248	.	-	.	ID=RLOC_00008111;geneIDs=comp143983_c1_seq1.path1;transcripts=comp143983_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56267603	56268248	.	-	.	ID=comp143983_c1_seq1.mrna1;geneID=comp143983_c1_seq1.path1;Name=comp143983_c1_seq1;Dir=indeterminatecoverage=98.3;identity=99.8;matches=646;mismatches=0;indels=1;unknowns=0;Target=comp143983_c1_seq1 658 12 .;CDS_Target=comp143983_c1_seq1 530 393 .;locus=RLOC_00008111
Chr1	stalkie_big_nohaplotig	exon	56267603	56268248	99	-	.	Parent=comp143983_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	56267730	56267867	.	-	0	Parent=comp143983_c1_seq1.mrna1
Chr1	gffcl	locus	56269277	56277893	.	+	.	ID=RLOC_00008112;geneIDs=FBgn0036155.1.path1;transcripts=FBgn0036155.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56269277	56277893	.	+	.	ID=FBgn0036155.1.mrna1;geneID=FBgn0036155.1.path1;Name=FBgn0036155.1;Dir=sensecoverage=100.0;identity=100.0;matches=1257;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008112
Chr1	stalkie_big_nohaplotig	exon	56269277	56269502	100	+	.	Parent=FBgn0036155.1.mrna1;Target=FBgn0036155.1 1 226 +
Chr1	stalkie_big_nohaplotig	exon	56270624	56271175	100	+	.	Parent=FBgn0036155.1.mrna1;Target=FBgn0036155.1 227 778 +
Chr1	stalkie_big_nohaplotig	exon	56277415	56277893	100	+	.	Parent=FBgn0036155.1.mrna1;Target=FBgn0036155.1 779 1257 +
Chr1	stalkie_big_nohaplotig	CDS	56269277	56269502	.	+	0	Parent=FBgn0036155.1.mrna1;Target=FBgn0036155.1 1 226 +
Chr1	stalkie_big_nohaplotig	CDS	56270624	56271175	.	+	2	Parent=FBgn0036155.1.mrna1;Target=FBgn0036155.1 227 778 +
Chr1	stalkie_big_nohaplotig	CDS	56277415	56277893	.	+	2	Parent=FBgn0036155.1.mrna1;Target=FBgn0036155.1 779 1257 +
Chr1	gffcl	locus	56328557	56329034	.	-	.	ID=RLOC_00008114;geneIDs=comp157122_c0_seq1.path10;transcripts=comp157122_c0_seq1.mrna10
Chr1	stalkie_big_nohaplotig	mRNA	56328557	56329034	.	-	.	ID=comp157122_c0_seq1.mrna10;geneID=comp157122_c0_seq1.path10;Name=comp157122_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=470;mismatches=7;indels=4;unknowns=0;Target=comp157122_c0_seq1 480 1 .;CDS_Target=comp157122_c0_seq1 480 244 .;locus=RLOC_00008114
Chr1	stalkie_big_nohaplotig	exon	56328557	56329034	97	-	.	Parent=comp157122_c0_seq1.mrna10
Chr1	stalkie_big_nohaplotig	CDS	56328557	56328793	.	-	0	Parent=comp157122_c0_seq1.mrna10
Chr1	gffcl	locus	56348343	56823674	.	+	.	ID=RLOC_00008115;geneIDs=comp157160_c2_seq1.path1;transcripts=comp157160_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56348343	56823674	.	+	.	ID=comp157160_c2_seq1.mrna1;geneID=comp157160_c2_seq1.path1;Name=comp157160_c2_seq1;Dir=indeterminatecoverage=92.7;identity=97.5;matches=915;mismatches=23;indels=0;unknowns=0;Target=comp157160_c2_seq1 882 1 .;locus=RLOC_00008115
Chr1	stalkie_big_nohaplotig	exon	56348343	56349244	97	+	.	Parent=comp157160_c2_seq1.mrna1;Target=comp157160_c2_seq1 902 1 .
Chr1	stalkie_big_nohaplotig	exon	56772924	56772926	100	+	.	Parent=comp157160_c2_seq1.mrna1;Target=comp157160_c2_seq1 905 903 .
Chr1	stalkie_big_nohaplotig	exon	56780257	56780258	100	+	.	Parent=comp157160_c2_seq1.mrna1;Target=comp157160_c2_seq1 907 906 .
Chr1	stalkie_big_nohaplotig	exon	56786258	56786266	100	+	.	Parent=comp157160_c2_seq1.mrna1;Target=comp157160_c2_seq1 916 908 .
Chr1	stalkie_big_nohaplotig	exon	56793451	56793452	100	+	.	Parent=comp157160_c2_seq1.mrna1;Target=comp157160_c2_seq1 918 917 .
Chr1	stalkie_big_nohaplotig	exon	56818068	56818079	100	+	.	Parent=comp157160_c2_seq1.mrna1;Target=comp157160_c2_seq1 930 919 .
Chr1	stalkie_big_nohaplotig	exon	56823667	56823674	100	+	.	Parent=comp157160_c2_seq1.mrna1;Target=comp157160_c2_seq1 938 931 .
Chr1	stalkie_big_nohaplotig	CDS	56348343	56349224	.	+	0	Parent=comp157160_c2_seq1.mrna1
Chr1	gffcl	locus	56368443	56369880	.	+	.	ID=RLOC_00008116;geneIDs=comp158825_c1_seq1.path2;transcripts=comp158825_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	56368443	56369880	.	+	.	ID=comp158825_c1_seq1.mrna2;geneID=comp158825_c1_seq1.path2;Name=comp158825_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=1416;mismatches=16;indels=6;unknowns=0;Target=comp158825_c1_seq1 1432 1 .;CDS_Target=comp158825_c1_seq1 1432 1208 .;locus=RLOC_00008116
Chr1	stalkie_big_nohaplotig	exon	56368443	56369880	98	+	.	Parent=comp158825_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	56369656	56369880	.	+	0	Parent=comp158825_c1_seq1.mrna2
Chr1	gffcl	locus	56382676	56385141	.	-	.	ID=RLOC_00008117;geneIDs=FBgn0040087.1.path1;transcripts=FBgn0040087.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56382676	56385141	.	-	.	ID=FBgn0040087.1.mrna1;geneID=FBgn0040087.1.path1;Name=FBgn0040087.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2466;mismatches=0;indels=0;unknowns=0;Target=FBgn0040087.1 2466 1 .;locus=RLOC_00008117
Chr1	stalkie_big_nohaplotig	exon	56382676	56385141	100	-	.	Parent=FBgn0040087.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	56382676	56385141	.	-	0	Parent=FBgn0040087.1.mrna1
Chr1	gffcl	locus	56413378	56413561	.	+	.	ID=RLOC_00008118;geneIDs=comp150030_c1_seq1.path1;transcripts=comp150030_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56413378	56413561	.	+	.	ID=comp150030_c1_seq1.mrna1;geneID=comp150030_c1_seq1.path1;Name=comp150030_c1_seq1;Dir=indeterminatecoverage=60.5;identity=93.0;matches=174;mismatches=10;indels=3;unknowns=0;Target=comp150030_c1_seq1 187 1 .;CDS_Target=comp150030_c1_seq1 187 35 .;locus=RLOC_00008118
Chr1	stalkie_big_nohaplotig	exon	56413378	56413561	93	+	.	Parent=comp150030_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	56413412	56413561	.	+	0	Parent=comp150030_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56603419	56639263	.	-	.	ID=comp163132_c0_seq1.mrna1;geneID=comp163132_c0_seq1.path1;Name=comp163132_c0_seq1;Dir=antisensecoverage=86.8;identity=96.3;matches=1261;mismatches=15;indels=33;unknowns=0;locus=RLOC_00008119
Chr1	stalkie_big_nohaplotig	exon	56603419	56603731	99	-	.	Parent=comp163132_c0_seq1.mrna1;Target=comp163132_c0_seq1 106 418 -
Chr1	stalkie_big_nohaplotig	exon	56603804	56603908	100	-	.	Parent=comp163132_c0_seq1.mrna1;Target=comp163132_c0_seq1 419 523 -
Chr1	stalkie_big_nohaplotig	exon	56603965	56604165	100	-	.	Parent=comp163132_c0_seq1.mrna1;Target=comp163132_c0_seq1 524 724 -
Chr1	stalkie_big_nohaplotig	exon	56604167	56604281	72	-	.	Parent=comp163132_c0_seq1.mrna1;Target=comp163132_c0_seq1 738 831 -
Chr1	stalkie_big_nohaplotig	exon	56616155	56616228	100	-	.	Parent=comp163132_c0_seq1.mrna1;Target=comp163132_c0_seq1 832 905 -
Chr1	stalkie_big_nohaplotig	exon	56624352	56624463	100	-	.	Parent=comp163132_c0_seq1.mrna1;Target=comp163132_c0_seq1 906 1017 -
Chr1	stalkie_big_nohaplotig	exon	56638653	56638817	92	-	.	Parent=comp163132_c0_seq1.mrna1;Target=comp163132_c0_seq1 1018 1194 -
Chr1	stalkie_big_nohaplotig	exon	56638979	56639070	98	-	.	Parent=comp163132_c0_seq1.mrna1;Target=comp163132_c0_seq1 1195 1286 -
Chr1	stalkie_big_nohaplotig	exon	56639144	56639263	100	-	.	Parent=comp163132_c0_seq1.mrna1;Target=comp163132_c0_seq1 1287 1406 -
Chr1	stalkie_big_nohaplotig	CDS	56604100	56604165	.	-	1	Parent=comp163132_c0_seq1.mrna1;Target=comp163132_c0_seq1 659 724 .
Chr1	stalkie_big_nohaplotig	CDS	56604167	56604281	.	-	2	Parent=comp163132_c0_seq1.mrna1;Target=comp163132_c0_seq1 738 831 .
Chr1	stalkie_big_nohaplotig	CDS	56616155	56616228	.	-	1	Parent=comp163132_c0_seq1.mrna1;Target=comp163132_c0_seq1 832 905 .
Chr1	stalkie_big_nohaplotig	CDS	56624352	56624463	.	-	2	Parent=comp163132_c0_seq1.mrna1;Target=comp163132_c0_seq1 906 1017 .
Chr1	stalkie_big_nohaplotig	CDS	56638653	56638817	.	-	2	Parent=comp163132_c0_seq1.mrna1;Target=comp163132_c0_seq1 1018 1194 .
Chr1	stalkie_big_nohaplotig	CDS	56638979	56638994	.	-	0	Parent=comp163132_c0_seq1.mrna1;Target=comp163132_c0_seq1 1195 1210 .
Chr1	stalkie_big_nohaplotig	mRNA	56603467	56607080	.	-	.	ID=ORF1105.mrna1;geneID=ORF1105.path1;Name=ORF1105;Dir=sensecoverage=99.6;identity=99.4;matches=1223;mismatches=8;indels=0;unknowns=0;locus=RLOC_00008119
Chr1	stalkie_big_nohaplotig	exon	56603467	56603731	99	-	.	Parent=ORF1105.mrna1;Target=ORF1105 972 1236 +
Chr1	stalkie_big_nohaplotig	exon	56603804	56603908	100	-	.	Parent=ORF1105.mrna1;Target=ORF1105 867 971 +
Chr1	stalkie_big_nohaplotig	exon	56603965	56604045	100	-	.	Parent=ORF1105.mrna1;Target=ORF1105 786 866 +
Chr1	stalkie_big_nohaplotig	exon	56604104	56604281	100	-	.	Parent=ORF1105.mrna1;Target=ORF1105 608 785 +
Chr1	stalkie_big_nohaplotig	exon	56604396	56604533	100	-	.	Parent=ORF1105.mrna1;Target=ORF1105 470 607 +
Chr1	stalkie_big_nohaplotig	exon	56605497	56605685	100	-	.	Parent=ORF1105.mrna1;Target=ORF1105 281 469 +
Chr1	stalkie_big_nohaplotig	exon	56606806	56607080	97	-	.	Parent=ORF1105.mrna1;Target=ORF1105 6 280 +
Chr1	stalkie_big_nohaplotig	CDS	56603467	56603731	.	-	1	Parent=ORF1105.mrna1;Target=ORF1105 972 1236 +
Chr1	stalkie_big_nohaplotig	CDS	56603804	56603908	.	-	1	Parent=ORF1105.mrna1;Target=ORF1105 867 971 +
Chr1	stalkie_big_nohaplotig	CDS	56603965	56604045	.	-	1	Parent=ORF1105.mrna1;Target=ORF1105 786 866 +
Chr1	stalkie_big_nohaplotig	CDS	56604104	56604281	.	-	2	Parent=ORF1105.mrna1;Target=ORF1105 608 785 +
Chr1	stalkie_big_nohaplotig	CDS	56604396	56604533	.	-	2	Parent=ORF1105.mrna1;Target=ORF1105 470 607 +
Chr1	stalkie_big_nohaplotig	CDS	56605497	56605685	.	-	2	Parent=ORF1105.mrna1;Target=ORF1105 281 469 +
Chr1	stalkie_big_nohaplotig	CDS	56606806	56607079	.	-	0	Parent=ORF1105.mrna1;Target=ORF1105 7 280 +
Chr1	gffcl	locus	56527769	56528716	.	+	.	ID=RLOC_00008120;geneIDs=comp109952_c0_seq1.path1;transcripts=comp109952_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56527769	56528716	.	+	.	ID=comp109952_c0_seq1.mrna1;geneID=comp109952_c0_seq1.path1;Name=comp109952_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=947;mismatches=1;indels=0;unknowns=0;Target=comp109952_c0_seq1 948 1 .;CDS_Target=comp109952_c0_seq1 858 727 .;locus=RLOC_00008120
Chr1	stalkie_big_nohaplotig	exon	56527769	56528716	99	+	.	Parent=comp109952_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	56528495	56528626	.	+	0	Parent=comp109952_c0_seq1.mrna1
Chr1	gffcl	locus	56662625	56662973	.	+	.	ID=RLOC_00008121;geneIDs=FBgn0035285.1.path2;transcripts=FBgn0035285.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	56662625	56662973	.	+	.	ID=FBgn0035285.1.mrna2;geneID=FBgn0035285.1.path2;Name=FBgn0035285.1;Dir=indeterminatecoverage=54.6;identity=100.0;matches=349;mismatches=0;indels=0;unknowns=0;Target=FBgn0035285.1 639 291 .;locus=RLOC_00008121
Chr1	stalkie_big_nohaplotig	exon	56662625	56662973	100	+	.	Parent=FBgn0035285.1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	56662625	56662973	.	+	2	Parent=FBgn0035285.1.mrna2
Chr1	gffcl	locus	56667146	56840084	.	.	.	ID=RLOC_00008122;geneIDs=AAEL017378.1.path6,comp157826_c3_seq1.path1;transcripts=comp157826_c3_seq1.mrna1,AAEL017378.1.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	56667146	56840084	.	+	.	ID=comp157826_c3_seq1.mrna1;geneID=comp157826_c3_seq1.path1;Name=comp157826_c3_seq1;Dir=indeterminatecoverage=85.8;identity=87.2;matches=1508;mismatches=94;indels=127;unknowns=0;Target=comp157826_c3_seq1 1437 1327 .;locus=RLOC_00008122
Chr1	stalkie_big_nohaplotig	exon	56667146	56667152	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 280 274 .
Chr1	stalkie_big_nohaplotig	exon	56674668	56674689	59	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 293 281 .
Chr1	stalkie_big_nohaplotig	exon	56677351	56677358	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 301 294 .
Chr1	stalkie_big_nohaplotig	exon	56680921	56680924	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 305 302 .
Chr1	stalkie_big_nohaplotig	exon	56684089	56684091	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 308 306 .
Chr1	stalkie_big_nohaplotig	exon	56691883	56691887	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 313 309 .
Chr1	stalkie_big_nohaplotig	exon	56706035	56706040	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 319 314 .
Chr1	stalkie_big_nohaplotig	exon	56711348	56711350	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 322 320 .
Chr1	stalkie_big_nohaplotig	exon	56714832	56714843	91	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 334 323 .
Chr1	stalkie_big_nohaplotig	exon	56725359	56725384	57	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 374 335 .
Chr1	stalkie_big_nohaplotig	exon	56726205	56726207	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 377 375 .
Chr1	stalkie_big_nohaplotig	exon	56731435	56731437	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 380 378 .
Chr1	stalkie_big_nohaplotig	exon	56738260	56738266	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 387 381 .
Chr1	stalkie_big_nohaplotig	exon	56750495	56750500	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 393 388 .
Chr1	stalkie_big_nohaplotig	exon	56757677	56757680	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 397 394 .
Chr1	stalkie_big_nohaplotig	exon	56762380	56762386	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 404 398 .
Chr1	stalkie_big_nohaplotig	exon	56766600	56766616	82	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 421 405 .
Chr1	stalkie_big_nohaplotig	exon	56776959	56776960	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 423 422 .
Chr1	stalkie_big_nohaplotig	exon	56783388	56783390	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 426 424 .
Chr1	stalkie_big_nohaplotig	exon	56793222	56793229	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 434 427 .
Chr1	stalkie_big_nohaplotig	exon	56800683	56800783	39	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 507 435 .
Chr1	stalkie_big_nohaplotig	exon	56802551	56802579	53	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 537 508 .
Chr1	stalkie_big_nohaplotig	exon	56802727	56802748	61	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 563 538 .
Chr1	stalkie_big_nohaplotig	exon	56806581	56806597	68	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 585 564 .
Chr1	stalkie_big_nohaplotig	exon	56808183	56808191	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 594 586 .
Chr1	stalkie_big_nohaplotig	exon	56808952	56808959	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 602 595 .
Chr1	stalkie_big_nohaplotig	exon	56809913	56809923	90	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 613 603 .
Chr1	stalkie_big_nohaplotig	exon	56816195	56816203	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 622 614 .
Chr1	stalkie_big_nohaplotig	exon	56821634	56821640	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 629 623 .
Chr1	stalkie_big_nohaplotig	exon	56823088	56823099	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 641 630 .
Chr1	stalkie_big_nohaplotig	exon	56823778	56823789	91	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 653 642 .
Chr1	stalkie_big_nohaplotig	exon	56825419	56825425	71	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 660 654 .
Chr1	stalkie_big_nohaplotig	exon	56825716	56825718	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 663 661 .
Chr1	stalkie_big_nohaplotig	exon	56827380	56827383	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 667 664 .
Chr1	stalkie_big_nohaplotig	exon	56830220	56830229	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 677 668 .
Chr1	stalkie_big_nohaplotig	exon	56830323	56830404	53	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 753 678 .
Chr1	stalkie_big_nohaplotig	exon	56834438	56834523	58	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 835 754 .
Chr1	stalkie_big_nohaplotig	exon	56838708	56838716	100	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 844 836 .
Chr1	stalkie_big_nohaplotig	exon	56839001	56840084	99	+	.	Parent=comp157826_c3_seq1.mrna1;Target=comp157826_c3_seq1 1926 845 .
Chr1	stalkie_big_nohaplotig	CDS	56839484	56839593	.	+	0	Parent=comp157826_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56729966	56731902	.	-	.	ID=AAEL017378.1.mrna6;geneID=AAEL017378.1.path6;Name=AAEL017378.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1926;mismatches=11;indels=4;unknowns=0;Target=AAEL017378.1 1941 1 .;CDS_Target=AAEL017378.1 164 87 .;locus=RLOC_00008122
Chr1	stalkie_big_nohaplotig	exon	56729966	56731902	99	-	.	Parent=AAEL017378.1.mrna6
Chr1	stalkie_big_nohaplotig	CDS	56731743	56731819	.	-	0	Parent=AAEL017378.1.mrna6
Chr1	gffcl	locus	56668029	56668667	.	-	.	ID=RLOC_00008123;geneIDs=comp149617_c0_seq1.path1;transcripts=comp149617_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56668029	56668667	.	-	.	ID=comp149617_c0_seq1.mrna1;geneID=comp149617_c0_seq1.path1;Name=comp149617_c0_seq1;Dir=indeterminatecoverage=98.0;identity=98.9;matches=632;mismatches=6;indels=1;unknowns=0;Target=comp149617_c0_seq1 638 1 .;CDS_Target=comp149617_c0_seq1 302 264 .;locus=RLOC_00008123
Chr1	stalkie_big_nohaplotig	exon	56668029	56668667	98	-	.	Parent=comp149617_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	56668365	56668404	.	-	0	Parent=comp149617_c0_seq1.mrna1
Chr1	gffcl	locus	56669091	56669542	.	+	.	ID=RLOC_00008124;geneIDs=comp135505_c0_seq1.path1;transcripts=comp135505_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56669091	56669542	.	+	.	ID=comp135505_c0_seq1.mrna1;geneID=comp135505_c0_seq1.path1;Name=comp135505_c0_seq1;Dir=indeterminatecoverage=97.4;identity=98.0;matches=449;mismatches=3;indels=6;unknowns=0;Target=comp135505_c0_seq1 470 13 .;CDS_Target=comp135505_c0_seq1 36 13 .;locus=RLOC_00008124
Chr1	stalkie_big_nohaplotig	exon	56669091	56669542	98	+	.	Parent=comp135505_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	56669091	56669112	.	+	0	Parent=comp135505_c0_seq1.mrna1
Chr1	gffcl	locus	56683173	56689230	.	-	.	ID=RLOC_00008125;geneIDs=FBgn0002183.1.path1;transcripts=FBgn0002183.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56683173	56689230	.	-	.	ID=FBgn0002183.1.mrna1;geneID=FBgn0002183.1.path1;Name=FBgn0002183.1;Dir=sensecoverage=100.0;identity=99.8;matches=3343;mismatches=8;indels=0;unknowns=0;locus=RLOC_00008125
Chr1	stalkie_big_nohaplotig	exon	56683173	56683332	100	-	.	Parent=FBgn0002183.1.mrna1;Target=FBgn0002183.1 3192 3351 +
Chr1	stalkie_big_nohaplotig	exon	56683571	56683663	100	-	.	Parent=FBgn0002183.1.mrna1;Target=FBgn0002183.1 3099 3191 +
Chr1	stalkie_big_nohaplotig	exon	56683894	56684041	100	-	.	Parent=FBgn0002183.1.mrna1;Target=FBgn0002183.1 2951 3098 +
Chr1	stalkie_big_nohaplotig	exon	56685306	56685571	99	-	.	Parent=FBgn0002183.1.mrna1;Target=FBgn0002183.1 2685 2950 +
Chr1	stalkie_big_nohaplotig	exon	56685639	56686505	100	-	.	Parent=FBgn0002183.1.mrna1;Target=FBgn0002183.1 1818 2684 +
Chr1	stalkie_big_nohaplotig	exon	56686813	56687990	99	-	.	Parent=FBgn0002183.1.mrna1;Target=FBgn0002183.1 640 1817 +
Chr1	stalkie_big_nohaplotig	exon	56688053	56688352	100	-	.	Parent=FBgn0002183.1.mrna1;Target=FBgn0002183.1 340 639 +
Chr1	stalkie_big_nohaplotig	exon	56688419	56688682	100	-	.	Parent=FBgn0002183.1.mrna1;Target=FBgn0002183.1 76 339 +
Chr1	stalkie_big_nohaplotig	exon	56689156	56689230	98	-	.	Parent=FBgn0002183.1.mrna1;Target=FBgn0002183.1 1 75 +
Chr1	stalkie_big_nohaplotig	CDS	56683173	56683332	.	-	1	Parent=FBgn0002183.1.mrna1;Target=FBgn0002183.1 3192 3351 +
Chr1	stalkie_big_nohaplotig	CDS	56683571	56683663	.	-	1	Parent=FBgn0002183.1.mrna1;Target=FBgn0002183.1 3099 3191 +
Chr1	stalkie_big_nohaplotig	CDS	56683894	56684041	.	-	2	Parent=FBgn0002183.1.mrna1;Target=FBgn0002183.1 2951 3098 +
Chr1	stalkie_big_nohaplotig	CDS	56685306	56685571	.	-	1	Parent=FBgn0002183.1.mrna1;Target=FBgn0002183.1 2685 2950 +
Chr1	stalkie_big_nohaplotig	CDS	56685639	56686505	.	-	1	Parent=FBgn0002183.1.mrna1;Target=FBgn0002183.1 1818 2684 +
Chr1	stalkie_big_nohaplotig	CDS	56686813	56687990	.	-	0	Parent=FBgn0002183.1.mrna1;Target=FBgn0002183.1 640 1817 +
Chr1	stalkie_big_nohaplotig	CDS	56688053	56688352	.	-	0	Parent=FBgn0002183.1.mrna1;Target=FBgn0002183.1 340 639 +
Chr1	stalkie_big_nohaplotig	CDS	56688419	56688682	.	-	0	Parent=FBgn0002183.1.mrna1;Target=FBgn0002183.1 76 339 +
Chr1	stalkie_big_nohaplotig	CDS	56689156	56689230	.	-	0	Parent=FBgn0002183.1.mrna1;Target=FBgn0002183.1 1 75 +
Chr1	gffcl	locus	56693347	56701468	.	+	.	ID=RLOC_00008126;geneIDs=FBgn0002466.1.path1;transcripts=FBgn0002466.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56693347	56701468	.	+	.	ID=FBgn0002466.1.mrna1;geneID=FBgn0002466.1.path1;Name=FBgn0002466.1;Dir=sensecoverage=99.9;identity=96.3;matches=4997;mismatches=60;indels=131;unknowns=0;Target=FBgn0002466.1 2051 2095 +;locus=RLOC_00008126
Chr1	stalkie_big_nohaplotig	exon	56693347	56693698	99	+	.	Parent=FBgn0002466.1.mrna1;Target=FBgn0002466.1 6 357 +
Chr1	stalkie_big_nohaplotig	exon	56695321	56697364	91	+	.	Parent=FBgn0002466.1.mrna1;Target=FBgn0002466.1 358 2406 +
Chr1	stalkie_big_nohaplotig	exon	56697539	56698577	99	+	.	Parent=FBgn0002466.1.mrna1;Target=FBgn0002466.1 2407 3445 +
Chr1	stalkie_big_nohaplotig	exon	56699784	56701468	99	+	.	Parent=FBgn0002466.1.mrna1;Target=FBgn0002466.1 3446 5130 +
Chr1	stalkie_big_nohaplotig	CDS	56697020	56697053	.	+	0	Parent=FBgn0002466.1.mrna1
Chr1	gffcl	locus	56704354	56717154	.	+	.	ID=RLOC_00008127;geneIDs=FBgn0041775.1.path1;transcripts=FBgn0041775.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56704354	56717154	.	+	.	ID=FBgn0041775.1.mrna1;geneID=FBgn0041775.1.path1;Name=FBgn0041775.1;Dir=sensecoverage=100.0;identity=99.9;matches=1804;mismatches=1;indels=1;unknowns=0;locus=RLOC_00008127
Chr1	stalkie_big_nohaplotig	exon	56704354	56704483	100	+	.	Parent=FBgn0041775.1.mrna1;Target=FBgn0041775.1 1 130 +
Chr1	stalkie_big_nohaplotig	exon	56707344	56707802	99	+	.	Parent=FBgn0041775.1.mrna1;Target=FBgn0041775.1 131 589 +
Chr1	stalkie_big_nohaplotig	exon	56709260	56709732	100	+	.	Parent=FBgn0041775.1.mrna1;Target=FBgn0041775.1 590 1062 +
Chr1	stalkie_big_nohaplotig	exon	56709798	56709968	100	+	.	Parent=FBgn0041775.1.mrna1;Target=FBgn0041775.1 1063 1233 +
Chr1	stalkie_big_nohaplotig	exon	56713642	56713871	100	+	.	Parent=FBgn0041775.1.mrna1;Target=FBgn0041775.1 1234 1463 +
Chr1	stalkie_big_nohaplotig	exon	56715734	56715855	100	+	.	Parent=FBgn0041775.1.mrna1;Target=FBgn0041775.1 1464 1585 +
Chr1	stalkie_big_nohaplotig	exon	56715915	56716112	99	+	.	Parent=FBgn0041775.1.mrna1;Target=FBgn0041775.1 1586 1784 +
Chr1	stalkie_big_nohaplotig	exon	56717133	56717154	100	+	.	Parent=FBgn0041775.1.mrna1;Target=FBgn0041775.1 1785 1806 +
Chr1	stalkie_big_nohaplotig	CDS	56704354	56704483	.	+	0	Parent=FBgn0041775.1.mrna1;Target=FBgn0041775.1 1 130 +
Chr1	stalkie_big_nohaplotig	CDS	56707344	56707802	.	+	2	Parent=FBgn0041775.1.mrna1;Target=FBgn0041775.1 131 589 +
Chr1	stalkie_big_nohaplotig	CDS	56709260	56709732	.	+	2	Parent=FBgn0041775.1.mrna1;Target=FBgn0041775.1 590 1062 +
Chr1	stalkie_big_nohaplotig	CDS	56709798	56709968	.	+	0	Parent=FBgn0041775.1.mrna1;Target=FBgn0041775.1 1063 1233 +
Chr1	stalkie_big_nohaplotig	CDS	56713642	56713871	.	+	0	Parent=FBgn0041775.1.mrna1;Target=FBgn0041775.1 1234 1463 +
Chr1	stalkie_big_nohaplotig	CDS	56715734	56715855	.	+	1	Parent=FBgn0041775.1.mrna1;Target=FBgn0041775.1 1464 1585 +
Chr1	stalkie_big_nohaplotig	CDS	56715915	56716112	.	+	2	Parent=FBgn0041775.1.mrna1;Target=FBgn0041775.1 1586 1784 +
Chr1	stalkie_big_nohaplotig	CDS	56717133	56717154	.	+	2	Parent=FBgn0041775.1.mrna1;Target=FBgn0041775.1 1785 1806 +
Chr1	gffcl	locus	56719578	56719741	.	-	.	ID=RLOC_00008128;geneIDs=comp143363_c0_seq1.path2;transcripts=comp143363_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	56719578	56719741	.	-	.	ID=comp143363_c0_seq1.mrna2;geneID=comp143363_c0_seq1.path2;Name=comp143363_c0_seq1;Dir=indeterminatecoverage=54.0;identity=84.1;matches=138;mismatches=10;indels=16;unknowns=0;Target=comp143363_c0_seq1 251 104 .;CDS_Target=comp143363_c0_seq1 165 106 .;locus=RLOC_00008128
Chr1	stalkie_big_nohaplotig	exon	56719578	56719741	84	-	.	Parent=comp143363_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	56719680	56719739	.	-	0	Parent=comp143363_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	56758520	58569837	.	+	.	ID=comp158156_c3_seq1.mrna1;geneID=comp158156_c3_seq1.path1;Name=comp158156_c3_seq1;Dir=indeterminatecoverage=91.0;identity=90.4;matches=2005;mismatches=73;indels=141;unknowns=0;Target=comp158156_c3_seq1 857 591 .;locus=RLOC_00008129
Chr1	stalkie_big_nohaplotig	exon	56758520	56760166	97	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 1621 5 .
Chr1	stalkie_big_nohaplotig	exon	58309050	58309060	90	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 1632 1622 .
Chr1	stalkie_big_nohaplotig	exon	58309066	58309073	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 1677 1670 .
Chr1	stalkie_big_nohaplotig	exon	58316635	58316756	63	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 1847 1725 .
Chr1	stalkie_big_nohaplotig	exon	58318281	58318287	71	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 1854 1848 .
Chr1	stalkie_big_nohaplotig	exon	58322945	58322946	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 1856 1855 .
Chr1	stalkie_big_nohaplotig	exon	58328886	58328887	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 1858 1857 .
Chr1	stalkie_big_nohaplotig	exon	58339428	58339437	90	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 1868 1859 .
Chr1	stalkie_big_nohaplotig	exon	58350932	58350962	60	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 1903 1869 .
Chr1	stalkie_big_nohaplotig	exon	58357722	58357725	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 1907 1904 .
Chr1	stalkie_big_nohaplotig	exon	58381547	58381553	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 1914 1908 .
Chr1	stalkie_big_nohaplotig	exon	58386804	58386806	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 1917 1915 .
Chr1	stalkie_big_nohaplotig	exon	58393209	58393210	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 1919 1918 .
Chr1	stalkie_big_nohaplotig	exon	58400192	58400200	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 1928 1920 .
Chr1	stalkie_big_nohaplotig	exon	58422061	58422062	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 1930 1929 .
Chr1	stalkie_big_nohaplotig	exon	58422180	58422188	88	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 1939 1931 .
Chr1	stalkie_big_nohaplotig	exon	58426875	58426883	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 1948 1940 .
Chr1	stalkie_big_nohaplotig	exon	58432408	58432412	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 1953 1949 .
Chr1	stalkie_big_nohaplotig	exon	58438509	58438512	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 1957 1954 .
Chr1	stalkie_big_nohaplotig	exon	58442671	58442675	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 1962 1958 .
Chr1	stalkie_big_nohaplotig	exon	58445566	58445573	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 1970 1963 .
Chr1	stalkie_big_nohaplotig	exon	58473541	58473562	60	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 1995 1971 .
Chr1	stalkie_big_nohaplotig	exon	58482021	58482025	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 2000 1996 .
Chr1	stalkie_big_nohaplotig	exon	58486946	58486947	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 2002 2001 .
Chr1	stalkie_big_nohaplotig	exon	58510128	58510134	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 2009 2003 .
Chr1	stalkie_big_nohaplotig	exon	58516541	58516543	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 2012 2010 .
Chr1	stalkie_big_nohaplotig	exon	58529643	58529653	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 2023 2013 .
Chr1	stalkie_big_nohaplotig	exon	58531044	58531054	90	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 2034 2024 .
Chr1	stalkie_big_nohaplotig	exon	58531750	58531753	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 2038 2035 .
Chr1	stalkie_big_nohaplotig	exon	58536893	58536902	90	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 2048 2039 .
Chr1	stalkie_big_nohaplotig	exon	58544483	58544487	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 2053 2049 .
Chr1	stalkie_big_nohaplotig	exon	58549059	58549061	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 2056 2054 .
Chr1	stalkie_big_nohaplotig	exon	58551960	58551963	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 2060 2057 .
Chr1	stalkie_big_nohaplotig	exon	58553032	58553044	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 2073 2061 .
Chr1	stalkie_big_nohaplotig	exon	58559607	58559639	52	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 2109 2076 .
Chr1	stalkie_big_nohaplotig	exon	58560799	58560830	43	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 2123 2110 .
Chr1	stalkie_big_nohaplotig	exon	58561040	58561042	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 2126 2124 .
Chr1	stalkie_big_nohaplotig	exon	58563138	58563152	73	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 2141 2127 .
Chr1	stalkie_big_nohaplotig	exon	58566663	58566672	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 2151 2142 .
Chr1	stalkie_big_nohaplotig	exon	58566682	58566690	100	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 2196 2188 .
Chr1	stalkie_big_nohaplotig	exon	58568069	58568102	36	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 2251 2198 .
Chr1	stalkie_big_nohaplotig	exon	58569825	58569837	80	+	.	Parent=comp158156_c3_seq1.mrna1;Target=comp158156_c3_seq1 2266 2252 .
Chr1	stalkie_big_nohaplotig	CDS	56759139	56759405	.	+	0	Parent=comp158156_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58370911	58455049	.	+	.	ID=FBgn0004852.1.mrna1;geneID=FBgn0004852.1.path1;Name=FBgn0004852.1;Dir=sensecoverage=100.0;identity=99.8;matches=3869;mismatches=7;indels=0;unknowns=0;locus=RLOC_00008129
Chr1	stalkie_big_nohaplotig	exon	58370911	58371064	100	+	.	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 1 154 +
Chr1	stalkie_big_nohaplotig	exon	58415704	58415837	100	+	.	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 155 288 +
Chr1	stalkie_big_nohaplotig	exon	58416031	58416228	100	+	.	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 289 486 +
Chr1	stalkie_big_nohaplotig	exon	58419529	58419651	100	+	.	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 487 609 +
Chr1	stalkie_big_nohaplotig	exon	58420240	58420434	100	+	.	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 610 804 +
Chr1	stalkie_big_nohaplotig	exon	58420520	58420747	100	+	.	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 805 1032 +
Chr1	stalkie_big_nohaplotig	exon	58420872	58420999	100	+	.	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 1033 1160 +
Chr1	stalkie_big_nohaplotig	exon	58435554	58435712	100	+	.	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 1161 1319 +
Chr1	stalkie_big_nohaplotig	exon	58436104	58436236	98	+	.	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 1320 1452 +
Chr1	stalkie_big_nohaplotig	exon	58436306	58436927	100	+	.	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 1453 2074 +
Chr1	stalkie_big_nohaplotig	exon	58440378	58440476	98	+	.	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 2075 2173 +
Chr1	stalkie_big_nohaplotig	exon	58444449	58444567	100	+	.	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 2174 2292 +
Chr1	stalkie_big_nohaplotig	exon	58445161	58445387	100	+	.	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 2293 2519 +
Chr1	stalkie_big_nohaplotig	exon	58445513	58445720	100	+	.	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 2520 2727 +
Chr1	stalkie_big_nohaplotig	exon	58445790	58446085	99	+	.	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 2728 3023 +
Chr1	stalkie_big_nohaplotig	exon	58446153	58446315	98	+	.	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 3024 3186 +
Chr1	stalkie_big_nohaplotig	exon	58447733	58447945	100	+	.	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 3187 3399 +
Chr1	stalkie_big_nohaplotig	exon	58448033	58448137	100	+	.	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 3400 3504 +
Chr1	stalkie_big_nohaplotig	exon	58454587	58454829	100	+	.	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 3505 3747 +
Chr1	stalkie_big_nohaplotig	exon	58454921	58455049	100	+	.	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 3748 3876 +
Chr1	stalkie_big_nohaplotig	CDS	58370911	58371064	.	+	0	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 1 154 +
Chr1	stalkie_big_nohaplotig	CDS	58415704	58415837	.	+	2	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 155 288 +
Chr1	stalkie_big_nohaplotig	CDS	58416031	58416228	.	+	0	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 289 486 +
Chr1	stalkie_big_nohaplotig	CDS	58419529	58419651	.	+	0	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 487 609 +
Chr1	stalkie_big_nohaplotig	CDS	58420240	58420434	.	+	0	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 610 804 +
Chr1	stalkie_big_nohaplotig	CDS	58420520	58420747	.	+	0	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 805 1032 +
Chr1	stalkie_big_nohaplotig	CDS	58420872	58420999	.	+	0	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 1033 1160 +
Chr1	stalkie_big_nohaplotig	CDS	58435554	58435712	.	+	1	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 1161 1319 +
Chr1	stalkie_big_nohaplotig	CDS	58436104	58436236	.	+	1	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 1320 1452 +
Chr1	stalkie_big_nohaplotig	CDS	58436306	58436927	.	+	0	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 1453 2074 +
Chr1	stalkie_big_nohaplotig	CDS	58440378	58440476	.	+	2	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 2075 2173 +
Chr1	stalkie_big_nohaplotig	CDS	58444449	58444567	.	+	2	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 2174 2292 +
Chr1	stalkie_big_nohaplotig	CDS	58445161	58445387	.	+	0	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 2293 2519 +
Chr1	stalkie_big_nohaplotig	CDS	58445513	58445720	.	+	1	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 2520 2727 +
Chr1	stalkie_big_nohaplotig	CDS	58445790	58446085	.	+	0	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 2728 3023 +
Chr1	stalkie_big_nohaplotig	CDS	58446153	58446315	.	+	1	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 3024 3186 +
Chr1	stalkie_big_nohaplotig	CDS	58447733	58447945	.	+	0	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 3187 3399 +
Chr1	stalkie_big_nohaplotig	CDS	58448033	58448137	.	+	0	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 3400 3504 +
Chr1	stalkie_big_nohaplotig	CDS	58454587	58454829	.	+	0	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 3505 3747 +
Chr1	stalkie_big_nohaplotig	CDS	58454921	58455049	.	+	0	Parent=FBgn0004852.1.mrna1;Target=FBgn0004852.1 3748 3876 +
Chr1	stalkie_big_nohaplotig	mRNA	58442343	58442904	.	-	.	ID=comp104048_c0_seq1.mrna1;geneID=comp104048_c0_seq1.path1;Name=comp104048_c0_seq1;Dir=indeterminatecoverage=99.8;identity=86.9;matches=496;mismatches=30;indels=45;unknowns=0;Target=comp104048_c0_seq1 536 2 .;CDS_Target=comp104048_c0_seq1 534 478 .;locus=RLOC_00008129
Chr1	stalkie_big_nohaplotig	exon	58442343	58442904	86	-	.	Parent=comp104048_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	58442345	58442401	.	-	0	Parent=comp104048_c0_seq1.mrna1
Chr1	gffcl	locus	56771062	56772792	.	+	.	ID=RLOC_00008130;geneIDs=FBgn0036165.1.path1;transcripts=FBgn0036165.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56771062	56772792	.	+	.	ID=FBgn0036165.1.mrna1;geneID=FBgn0036165.1.path1;Name=FBgn0036165.1;Dir=sensecoverage=100.0;identity=99.3;matches=664;mismatches=2;indels=3;unknowns=0;locus=RLOC_00008130
Chr1	stalkie_big_nohaplotig	exon	56771062	56771543	98	+	.	Parent=FBgn0036165.1.mrna1;Target=FBgn0036165.1 1 479 +
Chr1	stalkie_big_nohaplotig	exon	56772534	56772644	100	+	.	Parent=FBgn0036165.1.mrna1;Target=FBgn0036165.1 480 590 +
Chr1	stalkie_big_nohaplotig	exon	56772717	56772792	100	+	.	Parent=FBgn0036165.1.mrna1;Target=FBgn0036165.1 591 666 +
Chr1	stalkie_big_nohaplotig	CDS	56771062	56771543	.	+	0	Parent=FBgn0036165.1.mrna1;Target=FBgn0036165.1 1 479 +
Chr1	stalkie_big_nohaplotig	CDS	56772534	56772644	.	+	1	Parent=FBgn0036165.1.mrna1;Target=FBgn0036165.1 480 590 +
Chr1	stalkie_big_nohaplotig	CDS	56772717	56772792	.	+	1	Parent=FBgn0036165.1.mrna1;Target=FBgn0036165.1 591 666 +
Chr1	gffcl	locus	56774957	56775232	.	+	.	ID=RLOC_00008131;geneIDs=comp147128_c0_seq1.path1;transcripts=comp147128_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56774957	56775232	.	+	.	ID=comp147128_c0_seq1.mrna1;geneID=comp147128_c0_seq1.path1;Name=comp147128_c0_seq1;Dir=indeterminatecoverage=52.0;identity=99.3;matches=274;mismatches=2;indels=0;unknowns=0;Target=comp147128_c0_seq1 531 256 .;CDS_Target=comp147128_c0_seq1 468 403 .;locus=RLOC_00008131
Chr1	stalkie_big_nohaplotig	exon	56774957	56775232	99	+	.	Parent=comp147128_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	56775104	56775169	.	+	0	Parent=comp147128_c0_seq1.mrna1
Chr1	gffcl	locus	56775761	56775954	.	+	.	ID=RLOC_00008132;geneIDs=comp115919_c0_seq1.path1;transcripts=comp115919_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56775761	56775954	.	+	.	ID=comp115919_c0_seq1.mrna1;geneID=comp115919_c0_seq1.path1;Name=comp115919_c0_seq1;Dir=indeterminatecoverage=63.0;identity=99.0;matches=192;mismatches=2;indels=0;unknowns=0;Target=comp115919_c0_seq1 308 115 .;CDS_Target=comp115919_c0_seq1 208 116 .;locus=RLOC_00008132
Chr1	stalkie_big_nohaplotig	exon	56775761	56775954	98	+	.	Parent=comp115919_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	56775762	56775854	.	+	0	Parent=comp115919_c0_seq1.mrna1
Chr1	gffcl	locus	56781082	56781311	.	-	.	ID=RLOC_00008133;geneIDs=comp116109_c0_seq1.path1;transcripts=comp116109_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56781082	56781311	.	-	.	ID=comp116109_c0_seq1.mrna1;geneID=comp116109_c0_seq1.path1;Name=comp116109_c0_seq1;Dir=indeterminatecoverage=94.7;identity=100.0;matches=230;mismatches=0;indels=0;unknowns=0;Target=comp116109_c0_seq1 230 1 .;CDS_Target=comp116109_c0_seq1 202 98 .;locus=RLOC_00008133
Chr1	stalkie_big_nohaplotig	exon	56781082	56781311	100	-	.	Parent=comp116109_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	56781110	56781214	.	-	0	Parent=comp116109_c0_seq1.mrna1
Chr1	gffcl	locus	56782471	56782727	.	-	.	ID=RLOC_00008134;geneIDs=comp87019_c0_seq1.path1;transcripts=comp87019_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56782471	56782727	.	-	.	ID=comp87019_c0_seq1.mrna1;geneID=comp87019_c0_seq1.path1;Name=comp87019_c0_seq1;Dir=indeterminatecoverage=95.2;identity=99.2;matches=255;mismatches=1;indels=1;unknowns=0;Target=comp87019_c0_seq1 256 1 .;CDS_Target=comp87019_c0_seq1 50 3 .;locus=RLOC_00008134
Chr1	stalkie_big_nohaplotig	exon	56782471	56782727	99	-	.	Parent=comp87019_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	56782678	56782725	.	-	0	Parent=comp87019_c0_seq1.mrna1
Chr1	gffcl	locus	56789882	56821173	.	-	.	ID=RLOC_00008135;geneIDs=FBgn0259481.1.path1,comp162993_c2_seq1.path1;transcripts=comp162993_c2_seq1.mrna1,FBgn0259481.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56789882	56795413	.	-	.	ID=comp162993_c2_seq1.mrna1;geneID=comp162993_c2_seq1.path1;Name=comp162993_c2_seq1;Dir=sensecoverage=99.5;identity=99.5;matches=3255;mismatches=7;indels=9;unknowns=0;locus=RLOC_00008135
Chr1	stalkie_big_nohaplotig	exon	56789882	56792037	99	-	.	Parent=comp162993_c2_seq1.mrna1;Target=comp162993_c2_seq1 1132 3279 +
Chr1	stalkie_big_nohaplotig	exon	56792118	56792214	100	-	.	Parent=comp162993_c2_seq1.mrna1;Target=comp162993_c2_seq1 1035 1131 +
Chr1	stalkie_big_nohaplotig	exon	56792630	56792790	100	-	.	Parent=comp162993_c2_seq1.mrna1;Target=comp162993_c2_seq1 874 1034 +
Chr1	stalkie_big_nohaplotig	exon	56794558	56795413	99	-	.	Parent=comp162993_c2_seq1.mrna1;Target=comp162993_c2_seq1 17 873 +
Chr1	stalkie_big_nohaplotig	CDS	56791032	56792037	.	-	1	Parent=comp162993_c2_seq1.mrna1;Target=comp162993_c2_seq1 1132 2137 +
Chr1	stalkie_big_nohaplotig	CDS	56792118	56792214	.	-	2	Parent=comp162993_c2_seq1.mrna1;Target=comp162993_c2_seq1 1035 1131 +
Chr1	stalkie_big_nohaplotig	CDS	56792630	56792790	.	-	1	Parent=comp162993_c2_seq1.mrna1;Target=comp162993_c2_seq1 874 1034 +
Chr1	stalkie_big_nohaplotig	CDS	56794558	56794724	.	-	0	Parent=comp162993_c2_seq1.mrna1;Target=comp162993_c2_seq1 707 873 +
Chr1	stalkie_big_nohaplotig	mRNA	56791035	56821173	.	-	.	ID=FBgn0259481.1.mrna1;geneID=FBgn0259481.1.path1;Name=FBgn0259481.1;Dir=sensecoverage=100.0;identity=99.8;matches=1623;mismatches=2;indels=1;unknowns=0;Target=FBgn0259481.1 3 56 +;locus=RLOC_00008135
Chr1	stalkie_big_nohaplotig	exon	56791035	56792037	99	-	.	Parent=FBgn0259481.1.mrna1;Target=FBgn0259481.1 624 1626 +
Chr1	stalkie_big_nohaplotig	exon	56792118	56792214	100	-	.	Parent=FBgn0259481.1.mrna1;Target=FBgn0259481.1 527 623 +
Chr1	stalkie_big_nohaplotig	exon	56792630	56792790	100	-	.	Parent=FBgn0259481.1.mrna1;Target=FBgn0259481.1 366 526 +
Chr1	stalkie_big_nohaplotig	exon	56820810	56821173	99	-	.	Parent=FBgn0259481.1.mrna1;Target=FBgn0259481.1 1 365 +
Chr1	stalkie_big_nohaplotig	CDS	56821119	56821171	.	-	0	Parent=FBgn0259481.1.mrna1
Chr1	gffcl	locus	56806666	56807522	.	-	.	ID=RLOC_00008136;geneIDs=comp150215_c0_seq1.path1;transcripts=comp150215_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56806666	56807522	.	-	.	ID=comp150215_c0_seq1.mrna1;geneID=comp150215_c0_seq1.path1;Name=comp150215_c0_seq1;Dir=indeterminatecoverage=96.5;identity=99.6;matches=854;mismatches=3;indels=0;unknowns=0;Target=comp150215_c0_seq1 857 1 .;CDS_Target=comp150215_c0_seq1 376 209 .;locus=RLOC_00008136
Chr1	stalkie_big_nohaplotig	exon	56806666	56807522	99	-	.	Parent=comp150215_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	56807147	56807314	.	-	0	Parent=comp150215_c0_seq1.mrna1
Chr1	gffcl	locus	56861529	56862417	.	+	.	ID=RLOC_00008137;geneIDs=FBgn0036173.1.path1;transcripts=FBgn0036173.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56861529	56862417	.	+	.	ID=FBgn0036173.1.mrna1;geneID=FBgn0036173.1.path1;Name=FBgn0036173.1;Dir=sensecoverage=100.0;identity=99.3;matches=420;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008137
Chr1	stalkie_big_nohaplotig	exon	56861529	56861603	97	+	.	Parent=FBgn0036173.1.mrna1;Target=FBgn0036173.1 1 75 +
Chr1	stalkie_big_nohaplotig	exon	56862012	56862248	100	+	.	Parent=FBgn0036173.1.mrna1;Target=FBgn0036173.1 76 312 +
Chr1	stalkie_big_nohaplotig	exon	56862307	56862417	99	+	.	Parent=FBgn0036173.1.mrna1;Target=FBgn0036173.1 313 423 +
Chr1	stalkie_big_nohaplotig	CDS	56861529	56861603	.	+	0	Parent=FBgn0036173.1.mrna1;Target=FBgn0036173.1 1 75 +
Chr1	stalkie_big_nohaplotig	CDS	56862012	56862248	.	+	0	Parent=FBgn0036173.1.mrna1;Target=FBgn0036173.1 76 312 +
Chr1	stalkie_big_nohaplotig	CDS	56862307	56862417	.	+	0	Parent=FBgn0036173.1.mrna1;Target=FBgn0036173.1 313 423 +
Chr1	gffcl	locus	56863286	56864058	.	-	.	ID=RLOC_00008138;geneIDs=comp161870_c0_seq1.path6;transcripts=comp161870_c0_seq1.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	56863286	56864058	.	-	.	ID=comp161870_c0_seq1.mrna6;geneID=comp161870_c0_seq1.path6;Name=comp161870_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.7;matches=742;mismatches=11;indels=22;unknowns=0;Target=comp161870_c0_seq1 755 1 .;CDS_Target=comp161870_c0_seq1 316 206 .;locus=RLOC_00008138
Chr1	stalkie_big_nohaplotig	exon	56863286	56864058	95	-	.	Parent=comp161870_c0_seq1.mrna6
Chr1	stalkie_big_nohaplotig	CDS	56863745	56863854	.	-	0	Parent=comp161870_c0_seq1.mrna6
Chr1	gffcl	locus	56880956	56881598	.	+	.	ID=RLOC_00008139;geneIDs=comp129905_c0_seq1.path1;transcripts=comp129905_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56880956	56881598	.	+	.	ID=comp129905_c0_seq1.mrna1;geneID=comp129905_c0_seq1.path1;Name=comp129905_c0_seq1;Dir=indeterminatecoverage=99.8;identity=96.9;matches=623;mismatches=20;indels=0;unknowns=0;Target=comp129905_c0_seq1 644 2 .;CDS_Target=comp129905_c0_seq1 521 435 .;locus=RLOC_00008139
Chr1	stalkie_big_nohaplotig	exon	56880956	56881598	96	+	.	Parent=comp129905_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	56881389	56881475	.	+	0	Parent=comp129905_c0_seq1.mrna1
Chr1	gffcl	locus	56887766	56901812	.	+	.	ID=RLOC_00008140;geneIDs=FBgn0041604.1.path1;transcripts=FBgn0041604.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56887766	56901812	.	+	.	ID=FBgn0041604.1.mrna1;geneID=FBgn0041604.1.path1;Name=FBgn0041604.1;Dir=sensecoverage=74.4;identity=99.6;matches=1103;mismatches=4;indels=0;unknowns=0;locus=RLOC_00008140
Chr1	stalkie_big_nohaplotig	exon	56887766	56887931	100	+	.	Parent=FBgn0041604.1.mrna1;Target=FBgn0041604.1 382 547 +
Chr1	stalkie_big_nohaplotig	exon	56890066	56890300	99	+	.	Parent=FBgn0041604.1.mrna1;Target=FBgn0041604.1 548 782 +
Chr1	stalkie_big_nohaplotig	exon	56894855	56895011	99	+	.	Parent=FBgn0041604.1.mrna1;Target=FBgn0041604.1 783 939 +
Chr1	stalkie_big_nohaplotig	exon	56895082	56895348	100	+	.	Parent=FBgn0041604.1.mrna1;Target=FBgn0041604.1 940 1206 +
Chr1	stalkie_big_nohaplotig	exon	56901531	56901812	99	+	.	Parent=FBgn0041604.1.mrna1;Target=FBgn0041604.1 1207 1488 +
Chr1	stalkie_big_nohaplotig	CDS	56887766	56887931	.	+	0	Parent=FBgn0041604.1.mrna1;Target=FBgn0041604.1 382 547 +
Chr1	stalkie_big_nohaplotig	CDS	56890066	56890300	.	+	2	Parent=FBgn0041604.1.mrna1;Target=FBgn0041604.1 548 782 +
Chr1	stalkie_big_nohaplotig	CDS	56894855	56895011	.	+	1	Parent=FBgn0041604.1.mrna1;Target=FBgn0041604.1 783 939 +
Chr1	stalkie_big_nohaplotig	CDS	56895082	56895348	.	+	0	Parent=FBgn0041604.1.mrna1;Target=FBgn0041604.1 940 1206 +
Chr1	stalkie_big_nohaplotig	CDS	56901531	56901812	.	+	0	Parent=FBgn0041604.1.mrna1;Target=FBgn0041604.1 1207 1488 +
Chr1	gffcl	locus	56904295	56904822	.	-	.	ID=RLOC_00008141;geneIDs=comp146287_c1_seq1.path1;transcripts=comp146287_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56904295	56904822	.	-	.	ID=comp146287_c1_seq1.mrna1;geneID=comp146287_c1_seq1.path1;Name=comp146287_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=526;mismatches=2;indels=0;unknowns=0;Target=comp146287_c1_seq1 528 1 .;CDS_Target=comp146287_c1_seq1 453 418 .;locus=RLOC_00008141
Chr1	stalkie_big_nohaplotig	exon	56904295	56904822	99	-	.	Parent=comp146287_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	56904370	56904405	.	-	0	Parent=comp146287_c1_seq1.mrna1
Chr1	gffcl	locus	56907004	56908614	.	-	.	ID=RLOC_00008142;geneIDs=comp153410_c0_seq1.path1;transcripts=comp153410_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56907004	56908614	.	-	.	ID=comp153410_c0_seq1.mrna1;geneID=comp153410_c0_seq1.path1;Name=comp153410_c0_seq1;Dir=antisensecoverage=99.2;identity=99.5;matches=613;mismatches=3;indels=0;unknowns=0;Target=comp153410_c0_seq1 253 348 .;locus=RLOC_00008142
Chr1	stalkie_big_nohaplotig	exon	56907004	56907223	100	-	.	Parent=comp153410_c0_seq1.mrna1;Target=comp153410_c0_seq1 6 225 -
Chr1	stalkie_big_nohaplotig	exon	56907777	56907967	99	-	.	Parent=comp153410_c0_seq1.mrna1;Target=comp153410_c0_seq1 226 416 -
Chr1	stalkie_big_nohaplotig	exon	56908356	56908459	98	-	.	Parent=comp153410_c0_seq1.mrna1;Target=comp153410_c0_seq1 417 520 -
Chr1	stalkie_big_nohaplotig	exon	56908514	56908614	100	-	.	Parent=comp153410_c0_seq1.mrna1;Target=comp153410_c0_seq1 521 621 -
Chr1	stalkie_big_nohaplotig	CDS	56907804	56907899	.	-	0	Parent=comp153410_c0_seq1.mrna1
Chr1	gffcl	locus	56910840	56911728	.	-	.	ID=RLOC_00008143;geneIDs=FBgn0036173.1.path2;transcripts=FBgn0036173.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	56910840	56911728	.	-	.	ID=FBgn0036173.1.mrna2;geneID=FBgn0036173.1.path2;Name=FBgn0036173.1;Dir=sensecoverage=100.0;identity=99.3;matches=420;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008143
Chr1	stalkie_big_nohaplotig	exon	56910840	56910950	99	-	.	Parent=FBgn0036173.1.mrna2;Target=FBgn0036173.1 313 423 +
Chr1	stalkie_big_nohaplotig	exon	56911009	56911245	100	-	.	Parent=FBgn0036173.1.mrna2;Target=FBgn0036173.1 76 312 +
Chr1	stalkie_big_nohaplotig	exon	56911654	56911728	97	-	.	Parent=FBgn0036173.1.mrna2;Target=FBgn0036173.1 1 75 +
Chr1	stalkie_big_nohaplotig	CDS	56910840	56910950	.	-	0	Parent=FBgn0036173.1.mrna2;Target=FBgn0036173.1 313 423 +
Chr1	stalkie_big_nohaplotig	CDS	56911009	56911245	.	-	0	Parent=FBgn0036173.1.mrna2;Target=FBgn0036173.1 76 312 +
Chr1	stalkie_big_nohaplotig	CDS	56911654	56911728	.	-	0	Parent=FBgn0036173.1.mrna2;Target=FBgn0036173.1 1 75 +
Chr1	gffcl	locus	56927740	56928863	.	+	.	ID=RLOC_00008144;geneIDs=comp150549_c0_seq1.path1;transcripts=comp150549_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56927740	56928863	.	+	.	ID=comp150549_c0_seq1.mrna1;geneID=comp150549_c0_seq1.path1;Name=comp150549_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.8;matches=1111;mismatches=12;indels=2;unknowns=0;Target=comp150549_c0_seq1 1125 2 .;CDS_Target=comp150549_c0_seq1 661 545 .;locus=RLOC_00008144
Chr1	stalkie_big_nohaplotig	exon	56927740	56928863	98	+	.	Parent=comp150549_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	56928284	56928399	.	+	0	Parent=comp150549_c0_seq1.mrna1
Chr1	gffcl	locus	56965882	56966907	.	+	.	ID=RLOC_00008145;geneIDs=comp150588_c0_seq1.path1;transcripts=comp150588_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56965882	56966907	.	+	.	ID=comp150588_c0_seq1.mrna1;geneID=comp150588_c0_seq1.path1;Name=comp150588_c0_seq1;Dir=antisensecoverage=98.6;identity=99.1;matches=886;mismatches=7;indels=1;unknowns=0;locus=RLOC_00008145
Chr1	stalkie_big_nohaplotig	exon	56965882	56966101	100	+	.	Parent=comp150588_c0_seq1.mrna1;Target=comp150588_c0_seq1 676 895 -
Chr1	stalkie_big_nohaplotig	exon	56966176	56966316	100	+	.	Parent=comp150588_c0_seq1.mrna1;Target=comp150588_c0_seq1 535 675 -
Chr1	stalkie_big_nohaplotig	exon	56966376	56966907	98	+	.	Parent=comp150588_c0_seq1.mrna1;Target=comp150588_c0_seq1 2 534 -
Chr1	stalkie_big_nohaplotig	CDS	56966014	56966101	.	+	0	Parent=comp150588_c0_seq1.mrna1;Target=comp150588_c0_seq1 676 763 .
Chr1	stalkie_big_nohaplotig	CDS	56966176	56966316	.	+	2	Parent=comp150588_c0_seq1.mrna1;Target=comp150588_c0_seq1 535 675 .
Chr1	stalkie_big_nohaplotig	CDS	56966376	56966443	.	+	2	Parent=comp150588_c0_seq1.mrna1;Target=comp150588_c0_seq1 467 534 .
Chr1	gffcl	locus	56974011	56975750	.	-	.	ID=RLOC_00008146;geneIDs=FBgn0013746.1.path1;transcripts=FBgn0013746.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56974011	56975750	.	-	.	ID=FBgn0013746.1.mrna1;geneID=FBgn0013746.1.path1;Name=FBgn0013746.1;Dir=sensecoverage=100.0;identity=99.9;matches=1346;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008146
Chr1	stalkie_big_nohaplotig	exon	56974011	56974152	99	-	.	Parent=FBgn0013746.1.mrna1;Target=FBgn0013746.1 1206 1347 +
Chr1	stalkie_big_nohaplotig	exon	56974207	56974539	100	-	.	Parent=FBgn0013746.1.mrna1;Target=FBgn0013746.1 873 1205 +
Chr1	stalkie_big_nohaplotig	exon	56974678	56975159	100	-	.	Parent=FBgn0013746.1.mrna1;Target=FBgn0013746.1 391 872 +
Chr1	stalkie_big_nohaplotig	exon	56975219	56975344	100	-	.	Parent=FBgn0013746.1.mrna1;Target=FBgn0013746.1 265 390 +
Chr1	stalkie_big_nohaplotig	exon	56975418	56975612	100	-	.	Parent=FBgn0013746.1.mrna1;Target=FBgn0013746.1 70 264 +
Chr1	stalkie_big_nohaplotig	exon	56975682	56975750	100	-	.	Parent=FBgn0013746.1.mrna1;Target=FBgn0013746.1 1 69 +
Chr1	stalkie_big_nohaplotig	CDS	56974011	56974152	.	-	1	Parent=FBgn0013746.1.mrna1;Target=FBgn0013746.1 1206 1347 +
Chr1	stalkie_big_nohaplotig	CDS	56974207	56974539	.	-	1	Parent=FBgn0013746.1.mrna1;Target=FBgn0013746.1 873 1205 +
Chr1	stalkie_big_nohaplotig	CDS	56974678	56975159	.	-	0	Parent=FBgn0013746.1.mrna1;Target=FBgn0013746.1 391 872 +
Chr1	stalkie_big_nohaplotig	CDS	56975219	56975344	.	-	0	Parent=FBgn0013746.1.mrna1;Target=FBgn0013746.1 265 390 +
Chr1	stalkie_big_nohaplotig	CDS	56975418	56975612	.	-	0	Parent=FBgn0013746.1.mrna1;Target=FBgn0013746.1 70 264 +
Chr1	stalkie_big_nohaplotig	CDS	56975682	56975750	.	-	0	Parent=FBgn0013746.1.mrna1;Target=FBgn0013746.1 1 69 +
Chr1	gffcl	locus	56978925	56983299	.	-	.	ID=RLOC_00008147;geneIDs=FBgn0027375.1.path1;transcripts=FBgn0027375.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56978925	56983299	.	-	.	ID=FBgn0027375.1.mrna1;geneID=FBgn0027375.1.path1;Name=FBgn0027375.1;Dir=sensecoverage=99.4;identity=99.8;matches=2534;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008147
Chr1	stalkie_big_nohaplotig	exon	56978925	56979604	99	-	.	Parent=FBgn0027375.1.mrna1;Target=FBgn0027375.1 1861 2540 +
Chr1	stalkie_big_nohaplotig	exon	56981322	56981761	99	-	.	Parent=FBgn0027375.1.mrna1;Target=FBgn0027375.1 1421 1860 +
Chr1	stalkie_big_nohaplotig	exon	56981822	56983123	99	-	.	Parent=FBgn0027375.1.mrna1;Target=FBgn0027375.1 119 1420 +
Chr1	stalkie_big_nohaplotig	exon	56983182	56983299	100	-	.	Parent=FBgn0027375.1.mrna1;Target=FBgn0027375.1 1 118 +
Chr1	stalkie_big_nohaplotig	CDS	56978927	56979604	.	-	0	Parent=FBgn0027375.1.mrna1;Target=FBgn0027375.1 1861 2538 +
Chr1	stalkie_big_nohaplotig	CDS	56981322	56981761	.	-	2	Parent=FBgn0027375.1.mrna1;Target=FBgn0027375.1 1421 1860 +
Chr1	stalkie_big_nohaplotig	CDS	56981822	56983123	.	-	2	Parent=FBgn0027375.1.mrna1;Target=FBgn0027375.1 119 1420 +
Chr1	stalkie_big_nohaplotig	CDS	56983182	56983299	.	-	0	Parent=FBgn0027375.1.mrna1;Target=FBgn0027375.1 1 118 +
Chr1	gffcl	locus	56985151	56985799	.	-	.	ID=RLOC_00008148;geneIDs=FBgn0036433.1.path1;transcripts=FBgn0036433.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56985151	56985799	.	-	.	ID=FBgn0036433.1.mrna1;geneID=FBgn0036433.1.path1;Name=FBgn0036433.1;Dir=sensecoverage=100.0;identity=100.0;matches=507;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008148
Chr1	stalkie_big_nohaplotig	exon	56985151	56985385	100	-	.	Parent=FBgn0036433.1.mrna1;Target=FBgn0036433.1 273 507 +
Chr1	stalkie_big_nohaplotig	exon	56985466	56985626	100	-	.	Parent=FBgn0036433.1.mrna1;Target=FBgn0036433.1 112 272 +
Chr1	stalkie_big_nohaplotig	exon	56985689	56985799	100	-	.	Parent=FBgn0036433.1.mrna1;Target=FBgn0036433.1 1 111 +
Chr1	stalkie_big_nohaplotig	CDS	56985151	56985385	.	-	1	Parent=FBgn0036433.1.mrna1;Target=FBgn0036433.1 273 507 +
Chr1	stalkie_big_nohaplotig	CDS	56985466	56985626	.	-	0	Parent=FBgn0036433.1.mrna1;Target=FBgn0036433.1 112 272 +
Chr1	stalkie_big_nohaplotig	CDS	56985689	56985799	.	-	0	Parent=FBgn0036433.1.mrna1;Target=FBgn0036433.1 1 111 +
Chr1	gffcl	locus	56988856	56989701	.	+	.	ID=RLOC_00008149;geneIDs=comp149676_c1_seq1.path1;transcripts=comp149676_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	56988856	56989701	.	+	.	ID=comp149676_c1_seq1.mrna1;geneID=comp149676_c1_seq1.path1;Name=comp149676_c1_seq1;Dir=sensecoverage=100.0;identity=97.4;matches=762;mismatches=8;indels=12;unknowns=0;Target=comp149676_c1_seq1 390 485 +;locus=RLOC_00008149
Chr1	stalkie_big_nohaplotig	exon	56988856	56989037	97	+	.	Parent=comp149676_c1_seq1.mrna1;Target=comp149676_c1_seq1 1 182 +
Chr1	stalkie_big_nohaplotig	exon	56989102	56989701	97	+	.	Parent=comp149676_c1_seq1.mrna1;Target=comp149676_c1_seq1 183 770 +
Chr1	stalkie_big_nohaplotig	CDS	56989309	56989408	.	+	0	Parent=comp149676_c1_seq1.mrna1
Chr1	gffcl	locus	57001690	57004644	.	-	.	ID=RLOC_00008150;geneIDs=FBgn0003388.1.path1;transcripts=FBgn0003388.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57001690	57004644	.	-	.	ID=FBgn0003388.1.mrna1;geneID=FBgn0003388.1.path1;Name=FBgn0003388.1;Dir=sensecoverage=99.9;identity=99.7;matches=1637;mismatches=5;indels=0;unknowns=0;locus=RLOC_00008150
Chr1	stalkie_big_nohaplotig	exon	57001690	57001797	100	-	.	Parent=FBgn0003388.1.mrna1;Target=FBgn0003388.1 1537 1644 +
Chr1	stalkie_big_nohaplotig	exon	57002333	57002548	99	-	.	Parent=FBgn0003388.1.mrna1;Target=FBgn0003388.1 1321 1536 +
Chr1	stalkie_big_nohaplotig	exon	57002978	57003217	100	-	.	Parent=FBgn0003388.1.mrna1;Target=FBgn0003388.1 1081 1320 +
Chr1	stalkie_big_nohaplotig	exon	57003268	57003442	100	-	.	Parent=FBgn0003388.1.mrna1;Target=FBgn0003388.1 906 1080 +
Chr1	stalkie_big_nohaplotig	exon	57003600	57003995	99	-	.	Parent=FBgn0003388.1.mrna1;Target=FBgn0003388.1 510 905 +
Chr1	stalkie_big_nohaplotig	exon	57004053	57004251	99	-	.	Parent=FBgn0003388.1.mrna1;Target=FBgn0003388.1 311 509 +
Chr1	stalkie_big_nohaplotig	exon	57004337	57004644	99	-	.	Parent=FBgn0003388.1.mrna1;Target=FBgn0003388.1 3 310 +
Chr1	stalkie_big_nohaplotig	CDS	57001690	57001797	.	-	0	Parent=FBgn0003388.1.mrna1;Target=FBgn0003388.1 1537 1644 +
Chr1	stalkie_big_nohaplotig	CDS	57002333	57002548	.	-	0	Parent=FBgn0003388.1.mrna1;Target=FBgn0003388.1 1321 1536 +
Chr1	stalkie_big_nohaplotig	CDS	57002978	57003217	.	-	0	Parent=FBgn0003388.1.mrna1;Target=FBgn0003388.1 1081 1320 +
Chr1	stalkie_big_nohaplotig	CDS	57003268	57003442	.	-	1	Parent=FBgn0003388.1.mrna1;Target=FBgn0003388.1 906 1080 +
Chr1	stalkie_big_nohaplotig	CDS	57003600	57003995	.	-	1	Parent=FBgn0003388.1.mrna1;Target=FBgn0003388.1 510 905 +
Chr1	stalkie_big_nohaplotig	CDS	57004053	57004251	.	-	2	Parent=FBgn0003388.1.mrna1;Target=FBgn0003388.1 311 509 +
Chr1	stalkie_big_nohaplotig	CDS	57004337	57004643	.	-	0	Parent=FBgn0003388.1.mrna1;Target=FBgn0003388.1 4 310 +
Chr1	gffcl	locus	57061297	57061822	.	+	.	ID=RLOC_00008151;geneIDs=comp149297_c0_seq1.path2;transcripts=comp149297_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	57061297	57061822	.	+	.	ID=comp149297_c0_seq1.mrna2;geneID=comp149297_c0_seq1.path2;Name=comp149297_c0_seq1;Dir=indeterminatecoverage=81.6;identity=95.1;matches=500;mismatches=26;indels=0;unknowns=0;Target=comp149297_c0_seq1 645 120 .;locus=RLOC_00008151
Chr1	stalkie_big_nohaplotig	exon	57061297	57061822	95	+	.	Parent=comp149297_c0_seq1.mrna2
Chr1	gffcl	locus	57089953	57090818	.	+	.	ID=RLOC_00008152;geneIDs=comp151054_c0_seq1.path1;transcripts=comp151054_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57089953	57090818	.	+	.	ID=comp151054_c0_seq1.mrna1;geneID=comp151054_c0_seq1.path1;Name=comp151054_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.5;matches=843;mismatches=23;indels=45;unknowns=0;Target=comp151054_c0_seq1 911 1 .;CDS_Target=comp151054_c0_seq1 363 259 .;locus=RLOC_00008152
Chr1	stalkie_big_nohaplotig	exon	57089953	57090818	92	+	.	Parent=comp151054_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	57090166	57090270	.	+	0	Parent=comp151054_c0_seq1.mrna1
Chr1	gffcl	locus	57110723	58899594	.	-	.	ID=RLOC_00008153;geneIDs=comp70771_c0_seq1.path1;transcripts=comp70771_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57110723	58899594	.	-	.	ID=comp70771_c0_seq1.mrna1;geneID=comp70771_c0_seq1.path1;Name=comp70771_c0_seq1;Dir=indeterminatecoverage=88.1;identity=99.2;matches=492;mismatches=4;indels=0;unknowns=0;Target=comp70771_c0_seq1 125 39 .;locus=RLOC_00008153
Chr1	stalkie_big_nohaplotig	exon	57110723	57110728	100	-	.	Parent=comp70771_c0_seq1.mrna1;Target=comp70771_c0_seq1 496 491 .
Chr1	stalkie_big_nohaplotig	exon	57112220	57112224	100	-	.	Parent=comp70771_c0_seq1.mrna1;Target=comp70771_c0_seq1 490 486 .
Chr1	stalkie_big_nohaplotig	exon	57112757	57112763	100	-	.	Parent=comp70771_c0_seq1.mrna1;Target=comp70771_c0_seq1 485 479 .
Chr1	stalkie_big_nohaplotig	exon	57116837	57116840	100	-	.	Parent=comp70771_c0_seq1.mrna1;Target=comp70771_c0_seq1 478 475 .
Chr1	stalkie_big_nohaplotig	exon	57121106	57121112	100	-	.	Parent=comp70771_c0_seq1.mrna1;Target=comp70771_c0_seq1 474 468 .
Chr1	stalkie_big_nohaplotig	exon	57126886	57126888	100	-	.	Parent=comp70771_c0_seq1.mrna1;Target=comp70771_c0_seq1 467 465 .
Chr1	stalkie_big_nohaplotig	exon	57134574	57134577	100	-	.	Parent=comp70771_c0_seq1.mrna1;Target=comp70771_c0_seq1 464 461 .
Chr1	stalkie_big_nohaplotig	exon	58899135	58899594	99	-	.	Parent=comp70771_c0_seq1.mrna1;Target=comp70771_c0_seq1 460 1 .
Chr1	stalkie_big_nohaplotig	CDS	58899470	58899556	.	-	0	Parent=comp70771_c0_seq1.mrna1
Chr1	gffcl	locus	57172613	57174490	.	-	.	ID=RLOC_00008154;geneIDs=ORF2608.path1;transcripts=ORF2608.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57172613	57174490	.	-	.	ID=ORF2608.mrna1;geneID=ORF2608.path1;Name=ORF2608;Dir=sensecoverage=100.0;identity=99.6;matches=831;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008154
Chr1	stalkie_big_nohaplotig	exon	57172613	57172864	99	-	.	Parent=ORF2608.mrna1;Target=ORF2608 583 834 +
Chr1	stalkie_big_nohaplotig	exon	57172928	57173140	100	-	.	Parent=ORF2608.mrna1;Target=ORF2608 370 582 +
Chr1	stalkie_big_nohaplotig	exon	57173268	57173381	100	-	.	Parent=ORF2608.mrna1;Target=ORF2608 256 369 +
Chr1	stalkie_big_nohaplotig	exon	57173552	57173673	100	-	.	Parent=ORF2608.mrna1;Target=ORF2608 134 255 +
Chr1	stalkie_big_nohaplotig	exon	57174358	57174490	99	-	.	Parent=ORF2608.mrna1;Target=ORF2608 1 133 +
Chr1	stalkie_big_nohaplotig	CDS	57172613	57172864	.	-	0	Parent=ORF2608.mrna1;Target=ORF2608 583 834 +
Chr1	stalkie_big_nohaplotig	CDS	57172928	57173140	.	-	0	Parent=ORF2608.mrna1;Target=ORF2608 370 582 +
Chr1	stalkie_big_nohaplotig	CDS	57173268	57173381	.	-	0	Parent=ORF2608.mrna1;Target=ORF2608 256 369 +
Chr1	stalkie_big_nohaplotig	CDS	57173552	57173673	.	-	2	Parent=ORF2608.mrna1;Target=ORF2608 134 255 +
Chr1	stalkie_big_nohaplotig	CDS	57174358	57174490	.	-	0	Parent=ORF2608.mrna1;Target=ORF2608 1 133 +
Chr1	gffcl	locus	57197982	57207077	.	-	.	ID=RLOC_00008155;geneIDs=FBgn0054039.1.path1;transcripts=FBgn0054039.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57197982	57207077	.	-	.	ID=FBgn0054039.1.mrna1;geneID=FBgn0054039.1.path1;Name=FBgn0054039.1;Dir=sensecoverage=100.0;identity=99.4;matches=617;mismatches=4;indels=0;unknowns=0;locus=RLOC_00008155
Chr1	stalkie_big_nohaplotig	exon	57197982	57198214	98	-	.	Parent=FBgn0054039.1.mrna1;Target=FBgn0054039.1 389 621 +
Chr1	stalkie_big_nohaplotig	exon	57198278	57198509	100	-	.	Parent=FBgn0054039.1.mrna1;Target=FBgn0054039.1 157 388 +
Chr1	stalkie_big_nohaplotig	exon	57199262	57199402	99	-	.	Parent=FBgn0054039.1.mrna1;Target=FBgn0054039.1 16 156 +
Chr1	stalkie_big_nohaplotig	exon	57207063	57207077	100	-	.	Parent=FBgn0054039.1.mrna1;Target=FBgn0054039.1 1 15 +
Chr1	stalkie_big_nohaplotig	CDS	57197982	57198214	.	-	2	Parent=FBgn0054039.1.mrna1;Target=FBgn0054039.1 389 621 +
Chr1	stalkie_big_nohaplotig	CDS	57198278	57198509	.	-	0	Parent=FBgn0054039.1.mrna1;Target=FBgn0054039.1 157 388 +
Chr1	stalkie_big_nohaplotig	CDS	57199262	57199402	.	-	0	Parent=FBgn0054039.1.mrna1;Target=FBgn0054039.1 16 156 +
Chr1	stalkie_big_nohaplotig	CDS	57207063	57207077	.	-	0	Parent=FBgn0054039.1.mrna1;Target=FBgn0054039.1 1 15 +
Chr1	gffcl	locus	57206537	57206886	.	+	.	ID=RLOC_00008156;geneIDs=FBgn0028418.1.path1;transcripts=FBgn0028418.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57206537	57206886	.	+	.	ID=FBgn0028418.1.mrna1;geneID=FBgn0028418.1.path1;Name=FBgn0028418.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=349;mismatches=1;indels=1;unknowns=0;Target=FBgn0028418.1 351 1 .;CDS_Target=FBgn0028418.1 140 3 .;locus=RLOC_00008156
Chr1	stalkie_big_nohaplotig	exon	57206537	57206886	99	+	.	Parent=FBgn0028418.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	57206539	57206675	.	+	0	Parent=FBgn0028418.1.mrna1
Chr1	gffcl	locus	57246175	57247337	.	-	.	ID=RLOC_00008158;geneIDs=comp66635_c0_seq1.path1;transcripts=comp66635_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57246175	57247337	.	-	.	ID=comp66635_c0_seq1.mrna1;geneID=comp66635_c0_seq1.path1;Name=comp66635_c0_seq1;Dir=sensecoverage=98.6;identity=100.0;matches=1064;mismatches=0;indels=0;unknowns=0;Target=comp66635_c0_seq1 267 362 +;locus=RLOC_00008158
Chr1	stalkie_big_nohaplotig	exon	57246175	57247103	100	-	.	Parent=comp66635_c0_seq1.mrna1;Target=comp66635_c0_seq1 151 1079 +
Chr1	stalkie_big_nohaplotig	exon	57247203	57247337	100	-	.	Parent=comp66635_c0_seq1.mrna1;Target=comp66635_c0_seq1 16 150 +
Chr1	stalkie_big_nohaplotig	CDS	57246892	57246987	.	-	0	Parent=comp66635_c0_seq1.mrna1
Chr1	gffcl	locus	57270666	57293641	.	+	.	ID=RLOC_00008159;geneIDs=FBgn0036428.1.path1;transcripts=FBgn0036428.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57270666	57293641	.	+	.	ID=FBgn0036428.1.mrna1;geneID=FBgn0036428.1.path1;Name=FBgn0036428.1;Dir=sensecoverage=100.0;identity=100.0;matches=1149;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008159
Chr1	stalkie_big_nohaplotig	exon	57270666	57270790	100	+	.	Parent=FBgn0036428.1.mrna1;Target=FBgn0036428.1 1 125 +
Chr1	stalkie_big_nohaplotig	exon	57277586	57277906	100	+	.	Parent=FBgn0036428.1.mrna1;Target=FBgn0036428.1 126 446 +
Chr1	stalkie_big_nohaplotig	exon	57291060	57291263	100	+	.	Parent=FBgn0036428.1.mrna1;Target=FBgn0036428.1 447 650 +
Chr1	stalkie_big_nohaplotig	exon	57291719	57291893	100	+	.	Parent=FBgn0036428.1.mrna1;Target=FBgn0036428.1 651 825 +
Chr1	stalkie_big_nohaplotig	exon	57293255	57293392	100	+	.	Parent=FBgn0036428.1.mrna1;Target=FBgn0036428.1 826 963 +
Chr1	stalkie_big_nohaplotig	exon	57293456	57293641	100	+	.	Parent=FBgn0036428.1.mrna1;Target=FBgn0036428.1 964 1149 +
Chr1	stalkie_big_nohaplotig	CDS	57270666	57270790	.	+	0	Parent=FBgn0036428.1.mrna1;Target=FBgn0036428.1 1 125 +
Chr1	stalkie_big_nohaplotig	CDS	57277586	57277906	.	+	1	Parent=FBgn0036428.1.mrna1;Target=FBgn0036428.1 126 446 +
Chr1	stalkie_big_nohaplotig	CDS	57291060	57291263	.	+	1	Parent=FBgn0036428.1.mrna1;Target=FBgn0036428.1 447 650 +
Chr1	stalkie_big_nohaplotig	CDS	57291719	57291893	.	+	1	Parent=FBgn0036428.1.mrna1;Target=FBgn0036428.1 651 825 +
Chr1	stalkie_big_nohaplotig	CDS	57293255	57293392	.	+	0	Parent=FBgn0036428.1.mrna1;Target=FBgn0036428.1 826 963 +
Chr1	stalkie_big_nohaplotig	CDS	57293456	57293641	.	+	0	Parent=FBgn0036428.1.mrna1;Target=FBgn0036428.1 964 1149 +
Chr1	gffcl	locus	57294633	57295146	.	-	.	ID=RLOC_00008160;geneIDs=comp135560_c0_seq1.path1;transcripts=comp135560_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57294633	57295146	.	-	.	ID=comp135560_c0_seq1.mrna1;geneID=comp135560_c0_seq1.path1;Name=comp135560_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.4;matches=511;mismatches=3;indels=0;unknowns=0;Target=comp135560_c0_seq1 518 5 .;CDS_Target=comp135560_c0_seq1 493 275 .;locus=RLOC_00008160
Chr1	stalkie_big_nohaplotig	exon	57294633	57295146	99	-	.	Parent=comp135560_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	57294658	57294876	.	-	0	Parent=comp135560_c0_seq1.mrna1
Chr1	gffcl	locus	57298101	57300777	.	-	.	ID=RLOC_00008161;geneIDs=FBgn0026409.1.path1;transcripts=FBgn0026409.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57298101	57300777	.	-	.	ID=FBgn0026409.1.mrna1;geneID=FBgn0026409.1.path1;Name=FBgn0026409.1;Dir=sensecoverage=100.0;identity=99.9;matches=1088;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008161
Chr1	stalkie_big_nohaplotig	exon	57298101	57298446	100	-	.	Parent=FBgn0026409.1.mrna1;Target=FBgn0026409.1 744 1089 +
Chr1	stalkie_big_nohaplotig	exon	57298515	57298855	99	-	.	Parent=FBgn0026409.1.mrna1;Target=FBgn0026409.1 403 743 +
Chr1	stalkie_big_nohaplotig	exon	57300376	57300777	100	-	.	Parent=FBgn0026409.1.mrna1;Target=FBgn0026409.1 1 402 +
Chr1	stalkie_big_nohaplotig	CDS	57298101	57298446	.	-	1	Parent=FBgn0026409.1.mrna1;Target=FBgn0026409.1 744 1089 +
Chr1	stalkie_big_nohaplotig	CDS	57298515	57298855	.	-	0	Parent=FBgn0026409.1.mrna1;Target=FBgn0026409.1 403 743 +
Chr1	stalkie_big_nohaplotig	CDS	57300376	57300777	.	-	0	Parent=FBgn0026409.1.mrna1;Target=FBgn0026409.1 1 402 +
Chr1	gffcl	locus	57299350	57299660	.	-	.	ID=RLOC_00008162;geneIDs=comp148470_c0_seq1.path1;transcripts=comp148470_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57299350	57299660	.	-	.	ID=comp148470_c0_seq1.mrna1;geneID=comp148470_c0_seq1.path1;Name=comp148470_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.4;matches=307;mismatches=4;indels=1;unknowns=0;Target=comp148470_c0_seq1 313 2 .;CDS_Target=comp148470_c0_seq1 202 2 .;locus=RLOC_00008162
Chr1	stalkie_big_nohaplotig	exon	57299350	57299660	98	-	.	Parent=comp148470_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	57299460	57299660	.	-	0	Parent=comp148470_c0_seq1.mrna1
Chr1	gffcl	locus	57304873	57353861	.	+	.	ID=RLOC_00008163;geneIDs=FBgn0263599.1.path1,comp163762_c3_seq1.path1;transcripts=FBgn0263599.1.mrna1,comp163762_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57304873	57311793	.	+	.	ID=FBgn0263599.1.mrna1;geneID=FBgn0263599.1.path1;Name=FBgn0263599.1;Dir=sensecoverage=100.0;identity=99.5;matches=6398;mismatches=34;indels=0;unknowns=0;locus=RLOC_00008163
Chr1	stalkie_big_nohaplotig	exon	57304873	57304926	100	+	.	Parent=FBgn0263599.1.mrna1;Target=FBgn0263599.1 1 54 +
Chr1	stalkie_big_nohaplotig	exon	57305043	57305500	99	+	.	Parent=FBgn0263599.1.mrna1;Target=FBgn0263599.1 55 512 +
Chr1	stalkie_big_nohaplotig	exon	57305554	57305788	99	+	.	Parent=FBgn0263599.1.mrna1;Target=FBgn0263599.1 513 747 +
Chr1	stalkie_big_nohaplotig	exon	57305847	57310593	99	+	.	Parent=FBgn0263599.1.mrna1;Target=FBgn0263599.1 748 5494 +
Chr1	stalkie_big_nohaplotig	exon	57310685	57310859	98	+	.	Parent=FBgn0263599.1.mrna1;Target=FBgn0263599.1 5495 5669 +
Chr1	stalkie_big_nohaplotig	exon	57310918	57311200	98	+	.	Parent=FBgn0263599.1.mrna1;Target=FBgn0263599.1 5670 5952 +
Chr1	stalkie_big_nohaplotig	exon	57311255	57311497	99	+	.	Parent=FBgn0263599.1.mrna1;Target=FBgn0263599.1 5953 6195 +
Chr1	stalkie_big_nohaplotig	exon	57311557	57311793	100	+	.	Parent=FBgn0263599.1.mrna1;Target=FBgn0263599.1 6196 6432 +
Chr1	stalkie_big_nohaplotig	CDS	57304873	57304926	.	+	0	Parent=FBgn0263599.1.mrna1;Target=FBgn0263599.1 1 54 +
Chr1	stalkie_big_nohaplotig	CDS	57305043	57305500	.	+	0	Parent=FBgn0263599.1.mrna1;Target=FBgn0263599.1 55 512 +
Chr1	stalkie_big_nohaplotig	CDS	57305554	57305788	.	+	1	Parent=FBgn0263599.1.mrna1;Target=FBgn0263599.1 513 747 +
Chr1	stalkie_big_nohaplotig	CDS	57305847	57310593	.	+	0	Parent=FBgn0263599.1.mrna1;Target=FBgn0263599.1 748 5494 +
Chr1	stalkie_big_nohaplotig	CDS	57310685	57310859	.	+	2	Parent=FBgn0263599.1.mrna1;Target=FBgn0263599.1 5495 5669 +
Chr1	stalkie_big_nohaplotig	CDS	57310918	57311200	.	+	1	Parent=FBgn0263599.1.mrna1;Target=FBgn0263599.1 5670 5952 +
Chr1	stalkie_big_nohaplotig	CDS	57311255	57311497	.	+	0	Parent=FBgn0263599.1.mrna1;Target=FBgn0263599.1 5953 6195 +
Chr1	stalkie_big_nohaplotig	CDS	57311557	57311793	.	+	0	Parent=FBgn0263599.1.mrna1;Target=FBgn0263599.1 6196 6432 +
Chr1	stalkie_big_nohaplotig	mRNA	57309430	57353861	.	+	.	ID=comp163762_c3_seq1.mrna1;geneID=comp163762_c3_seq1.path1;Name=comp163762_c3_seq1;Dir=indeterminatecoverage=97.1;identity=99.6;matches=2358;mismatches=10;indels=0;unknowns=0;Target=comp163762_c3_seq1 1857 352 .;locus=RLOC_00008163
Chr1	stalkie_big_nohaplotig	exon	57309430	57309434	100	+	.	Parent=comp163762_c3_seq1.mrna1;Target=comp163762_c3_seq1 75 71 .
Chr1	stalkie_big_nohaplotig	exon	57309550	57309551	100	+	.	Parent=comp163762_c3_seq1.mrna1;Target=comp163762_c3_seq1 77 76 .
Chr1	stalkie_big_nohaplotig	exon	57313280	57313288	88	+	.	Parent=comp163762_c3_seq1.mrna1;Target=comp163762_c3_seq1 86 78 .
Chr1	stalkie_big_nohaplotig	exon	57322733	57322740	75	+	.	Parent=comp163762_c3_seq1.mrna1;Target=comp163762_c3_seq1 94 87 .
Chr1	stalkie_big_nohaplotig	exon	57337350	57337352	100	+	.	Parent=comp163762_c3_seq1.mrna1;Target=comp163762_c3_seq1 97 95 .
Chr1	stalkie_big_nohaplotig	exon	57351521	57353861	99	+	.	Parent=comp163762_c3_seq1.mrna1;Target=comp163762_c3_seq1 2438 98 .
Chr1	stalkie_big_nohaplotig	CDS	57351775	57353280	.	+	0	Parent=comp163762_c3_seq1.mrna1
Chr1	gffcl	locus	57316343	57316660	.	-	.	ID=RLOC_00008164;geneIDs=comp151456_c0_seq1.path1;transcripts=comp151456_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57316343	57316660	.	-	.	ID=comp151456_c0_seq1.mrna1;geneID=comp151456_c0_seq1.path1;Name=comp151456_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=312;mismatches=6;indels=0;unknowns=0;Target=comp151456_c0_seq1 318 1 .;CDS_Target=comp151456_c0_seq1 125 3 .;locus=RLOC_00008164
Chr1	stalkie_big_nohaplotig	exon	57316343	57316660	98	-	.	Parent=comp151456_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	57316536	57316658	.	-	0	Parent=comp151456_c0_seq1.mrna1
Chr1	gffcl	locus	57327746	57328609	.	-	.	ID=RLOC_00008167;geneIDs=CPIJ003423.path2;transcripts=CPIJ003423.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	57327746	57328609	.	-	.	ID=CPIJ003423.mrna2;geneID=CPIJ003423.path2;Name=CPIJ003423;Dir=indeterminatecoverage=100.0;identity=99.9;matches=863;mismatches=1;indels=0;unknowns=0;Target=CPIJ003423 864 1 .;locus=RLOC_00008167
Chr1	stalkie_big_nohaplotig	exon	57327746	57328609	99	-	.	Parent=CPIJ003423.mrna2
Chr1	stalkie_big_nohaplotig	CDS	57327746	57328609	.	-	0	Parent=CPIJ003423.mrna2
Chr1	gffcl	locus	57335705	57342460	.	+	.	ID=RLOC_00008169;geneIDs=FBgn0037090.2.path1;transcripts=FBgn0037090.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57335705	57342460	.	+	.	ID=FBgn0037090.2.mrna1;geneID=FBgn0037090.2.path1;Name=FBgn0037090.2;Dir=sensecoverage=99.7;identity=98.8;matches=1439;mismatches=17;indels=0;unknowns=0;locus=RLOC_00008169
Chr1	stalkie_big_nohaplotig	exon	57335705	57335932	100	+	.	Parent=FBgn0037090.2.mrna1;Target=FBgn0037090.2 1 228 +
Chr1	stalkie_big_nohaplotig	exon	57340967	57341113	100	+	.	Parent=FBgn0037090.2.mrna1;Target=FBgn0037090.2 229 375 +
Chr1	stalkie_big_nohaplotig	exon	57341173	57341685	99	+	.	Parent=FBgn0037090.2.mrna1;Target=FBgn0037090.2 376 888 +
Chr1	stalkie_big_nohaplotig	exon	57341745	57341880	100	+	.	Parent=FBgn0037090.2.mrna1;Target=FBgn0037090.2 889 1024 +
Chr1	stalkie_big_nohaplotig	exon	57341970	57342160	99	+	.	Parent=FBgn0037090.2.mrna1;Target=FBgn0037090.2 1025 1215 +
Chr1	stalkie_big_nohaplotig	exon	57342220	57342460	94	+	.	Parent=FBgn0037090.2.mrna1;Target=FBgn0037090.2 1216 1456 +
Chr1	stalkie_big_nohaplotig	CDS	57335705	57335932	.	+	0	Parent=FBgn0037090.2.mrna1;Target=FBgn0037090.2 1 228 +
Chr1	stalkie_big_nohaplotig	CDS	57340967	57341113	.	+	0	Parent=FBgn0037090.2.mrna1;Target=FBgn0037090.2 229 375 +
Chr1	stalkie_big_nohaplotig	CDS	57341173	57341685	.	+	0	Parent=FBgn0037090.2.mrna1;Target=FBgn0037090.2 376 888 +
Chr1	stalkie_big_nohaplotig	CDS	57341745	57341880	.	+	0	Parent=FBgn0037090.2.mrna1;Target=FBgn0037090.2 889 1024 +
Chr1	stalkie_big_nohaplotig	CDS	57341970	57342160	.	+	2	Parent=FBgn0037090.2.mrna1;Target=FBgn0037090.2 1025 1215 +
Chr1	stalkie_big_nohaplotig	CDS	57342220	57342459	.	+	0	Parent=FBgn0037090.2.mrna1;Target=FBgn0037090.2 1216 1455 +
Chr1	gffcl	locus	57364924	57370084	.	-	.	ID=RLOC_00008171;geneIDs=FBgn0053214.1.path1;transcripts=FBgn0053214.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57364924	57370084	.	-	.	ID=FBgn0053214.1.mrna1;geneID=FBgn0053214.1.path1;Name=FBgn0053214.1;Dir=sensecoverage=100.0;identity=99.3;matches=3344;mismatches=25;indels=0;unknowns=0;locus=RLOC_00008171
Chr1	stalkie_big_nohaplotig	exon	57364924	57365091	99	-	.	Parent=FBgn0053214.1.mrna1;Target=FBgn0053214.1 3202 3369 +
Chr1	stalkie_big_nohaplotig	exon	57365161	57365267	100	-	.	Parent=FBgn0053214.1.mrna1;Target=FBgn0053214.1 3095 3201 +
Chr1	stalkie_big_nohaplotig	exon	57366460	57366832	99	-	.	Parent=FBgn0053214.1.mrna1;Target=FBgn0053214.1 2722 3094 +
Chr1	stalkie_big_nohaplotig	exon	57367047	57367415	98	-	.	Parent=FBgn0053214.1.mrna1;Target=FBgn0053214.1 2353 2721 +
Chr1	stalkie_big_nohaplotig	exon	57367536	57367933	99	-	.	Parent=FBgn0053214.1.mrna1;Target=FBgn0053214.1 1955 2352 +
Chr1	stalkie_big_nohaplotig	exon	57367991	57368117	100	-	.	Parent=FBgn0053214.1.mrna1;Target=FBgn0053214.1 1828 1954 +
Chr1	stalkie_big_nohaplotig	exon	57368187	57369260	98	-	.	Parent=FBgn0053214.1.mrna1;Target=FBgn0053214.1 754 1827 +
Chr1	stalkie_big_nohaplotig	exon	57369332	57370084	99	-	.	Parent=FBgn0053214.1.mrna1;Target=FBgn0053214.1 1 753 +
Chr1	stalkie_big_nohaplotig	CDS	57364924	57365091	.	-	0	Parent=FBgn0053214.1.mrna1;Target=FBgn0053214.1 3202 3369 +
Chr1	stalkie_big_nohaplotig	CDS	57365161	57365267	.	-	2	Parent=FBgn0053214.1.mrna1;Target=FBgn0053214.1 3095 3201 +
Chr1	stalkie_big_nohaplotig	CDS	57366460	57366832	.	-	0	Parent=FBgn0053214.1.mrna1;Target=FBgn0053214.1 2722 3094 +
Chr1	stalkie_big_nohaplotig	CDS	57367047	57367415	.	-	0	Parent=FBgn0053214.1.mrna1;Target=FBgn0053214.1 2353 2721 +
Chr1	stalkie_big_nohaplotig	CDS	57367536	57367933	.	-	2	Parent=FBgn0053214.1.mrna1;Target=FBgn0053214.1 1955 2352 +
Chr1	stalkie_big_nohaplotig	CDS	57367991	57368117	.	-	0	Parent=FBgn0053214.1.mrna1;Target=FBgn0053214.1 1828 1954 +
Chr1	stalkie_big_nohaplotig	CDS	57368187	57369260	.	-	0	Parent=FBgn0053214.1.mrna1;Target=FBgn0053214.1 754 1827 +
Chr1	stalkie_big_nohaplotig	CDS	57369332	57370084	.	-	0	Parent=FBgn0053214.1.mrna1;Target=FBgn0053214.1 1 753 +
Chr1	gffcl	locus	57372584	57373200	.	-	.	ID=RLOC_00008172;geneIDs=comp148977_c0_seq1.path1;transcripts=comp148977_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57372584	57373200	.	-	.	ID=comp148977_c0_seq1.mrna1;geneID=comp148977_c0_seq1.path1;Name=comp148977_c0_seq1;Dir=sensecoverage=99.3;identity=99.3;matches=454;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008172
Chr1	stalkie_big_nohaplotig	exon	57372584	57372813	99	-	.	Parent=comp148977_c0_seq1.mrna1;Target=comp148977_c0_seq1 229 458 +
Chr1	stalkie_big_nohaplotig	exon	57372922	57373049	99	-	.	Parent=comp148977_c0_seq1.mrna1;Target=comp148977_c0_seq1 101 228 +
Chr1	stalkie_big_nohaplotig	exon	57373102	57373200	100	-	.	Parent=comp148977_c0_seq1.mrna1;Target=comp148977_c0_seq1 2 100 +
Chr1	stalkie_big_nohaplotig	CDS	57372776	57372813	.	-	2	Parent=comp148977_c0_seq1.mrna1;Target=comp148977_c0_seq1 229 266 +
Chr1	stalkie_big_nohaplotig	CDS	57372922	57373033	.	-	0	Parent=comp148977_c0_seq1.mrna1;Target=comp148977_c0_seq1 117 228 +
Chr1	gffcl	locus	57441775	57446070	.	-	.	ID=RLOC_00008174;geneIDs=FBgn0036359.1.path1;transcripts=FBgn0036359.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57441775	57446070	.	-	.	ID=FBgn0036359.1.mrna1;geneID=FBgn0036359.1.path1;Name=FBgn0036359.1;Dir=sensecoverage=100.0;identity=99.3;matches=593;mismatches=4;indels=0;unknowns=0;locus=RLOC_00008174
Chr1	stalkie_big_nohaplotig	exon	57441775	57441843	100	-	.	Parent=FBgn0036359.1.mrna1;Target=FBgn0036359.1 529 597 +
Chr1	stalkie_big_nohaplotig	exon	57441919	57442094	100	-	.	Parent=FBgn0036359.1.mrna1;Target=FBgn0036359.1 353 528 +
Chr1	stalkie_big_nohaplotig	exon	57445719	57446070	98	-	.	Parent=FBgn0036359.1.mrna1;Target=FBgn0036359.1 1 352 +
Chr1	stalkie_big_nohaplotig	CDS	57441775	57441843	.	-	0	Parent=FBgn0036359.1.mrna1;Target=FBgn0036359.1 529 597 +
Chr1	stalkie_big_nohaplotig	CDS	57441919	57442094	.	-	2	Parent=FBgn0036359.1.mrna1;Target=FBgn0036359.1 353 528 +
Chr1	stalkie_big_nohaplotig	CDS	57445719	57446070	.	-	0	Parent=FBgn0036359.1.mrna1;Target=FBgn0036359.1 1 352 +
Chr1	stalkie_big_nohaplotig	mRNA	57450225	57452840	.	-	.	ID=comp163704_c2_seq1.mrna1;geneID=comp163704_c2_seq1.path1;Name=comp163704_c2_seq1;Dir=indeterminatecoverage=100.0;identity=94.3;matches=2175;mismatches=53;indels=78;unknowns=0;Target=comp163704_c2_seq1 982 941 .;locus=RLOC_00008175
Chr1	stalkie_big_nohaplotig	exon	57450225	57451275	99	-	.	Parent=comp163704_c2_seq1.mrna1;Target=comp163704_c2_seq1 2304 1253 .
Chr1	stalkie_big_nohaplotig	exon	57451349	57451487	95	-	.	Parent=comp163704_c2_seq1.mrna1;Target=comp163704_c2_seq1 1252 1113 .
Chr1	stalkie_big_nohaplotig	exon	57451801	57452840	89	-	.	Parent=comp163704_c2_seq1.mrna1;Target=comp163704_c2_seq1 1112 1 .
Chr1	stalkie_big_nohaplotig	CDS	57451931	57451961	.	-	0	Parent=comp163704_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59385969	59386501	.	-	.	ID=comp151125_c0_seq1.mrna1;geneID=comp151125_c0_seq1.path1;Name=comp151125_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=521;mismatches=12;indels=3;unknowns=0;Target=comp151125_c0_seq1 536 1 .;CDS_Target=comp151125_c0_seq1 352 158 .;locus=RLOC_00008175
Chr1	stalkie_big_nohaplotig	exon	59385969	59386501	97	-	.	Parent=comp151125_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	59386150	59386344	.	-	0	Parent=comp151125_c0_seq1.mrna1
Chr1	gffcl	locus	57455095	57456467	.	+	.	ID=RLOC_00008176;geneIDs=comp162696_c1_seq1.path1;transcripts=comp162696_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57455095	57456467	.	+	.	ID=comp162696_c1_seq1.mrna1;geneID=comp162696_c1_seq1.path1;Name=comp162696_c1_seq1;Dir=indeterminatecoverage=99.9;identity=97.7;matches=1345;mismatches=17;indels=14;unknowns=0;Target=comp162696_c1_seq1 1366 2 .;CDS_Target=comp162696_c1_seq1 124 2 .;locus=RLOC_00008176
Chr1	stalkie_big_nohaplotig	exon	57455095	57456467	97	+	.	Parent=comp162696_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	57455095	57455220	.	+	0	Parent=comp162696_c1_seq1.mrna1
Chr1	gffcl	locus	57456919	57457314	.	+	.	ID=RLOC_00008177;geneIDs=comp149656_c0_seq1.path1;transcripts=comp149656_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57456919	57457314	.	+	.	ID=comp149656_c0_seq1.mrna1;geneID=comp149656_c0_seq1.path1;Name=comp149656_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=393;mismatches=3;indels=2;unknowns=0;Target=comp149656_c0_seq1 398 1 .;CDS_Target=comp149656_c0_seq1 106 2 .;locus=RLOC_00008177
Chr1	stalkie_big_nohaplotig	exon	57456919	57457314	98	+	.	Parent=comp149656_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	57456920	57457024	.	+	0	Parent=comp149656_c0_seq1.mrna1
Chr1	gffcl	locus	57482545	57502180	.	+	.	ID=RLOC_00008178;geneIDs=comp119615_c0_seq1.path1;transcripts=comp119615_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57482545	57502180	.	+	.	ID=comp119615_c0_seq1.mrna1;geneID=comp119615_c0_seq1.path1;Name=comp119615_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=559;mismatches=3;indels=0;unknowns=0;Target=comp119615_c0_seq1 168 401 .;locus=RLOC_00008178
Chr1	stalkie_big_nohaplotig	exon	57482545	57482686	100	+	.	Parent=comp119615_c0_seq1.mrna1;Target=comp119615_c0_seq1 421 562 -
Chr1	stalkie_big_nohaplotig	exon	57501761	57502180	99	+	.	Parent=comp119615_c0_seq1.mrna1;Target=comp119615_c0_seq1 1 420 -
Chr1	stalkie_big_nohaplotig	CDS	57501780	57502013	.	+	0	Parent=comp119615_c0_seq1.mrna1
Chr1	gffcl	locus	57515332	57525295	.	-	.	ID=RLOC_00008179;geneIDs=FBgn0264006.1.path1;transcripts=FBgn0264006.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57515332	57525295	.	-	.	ID=FBgn0264006.1.mrna1;geneID=FBgn0264006.1.path1;Name=FBgn0264006.1;Dir=sensecoverage=100.0;identity=99.6;matches=2012;mismatches=9;indels=0;unknowns=0;locus=RLOC_00008179
Chr1	stalkie_big_nohaplotig	exon	57515332	57515412	100	-	.	Parent=FBgn0264006.1.mrna1;Target=FBgn0264006.1 1942 2022 +
Chr1	stalkie_big_nohaplotig	exon	57516576	57516686	100	-	.	Parent=FBgn0264006.1.mrna1;Target=FBgn0264006.1 1831 1941 +
Chr1	stalkie_big_nohaplotig	exon	57516751	57516922	99	-	.	Parent=FBgn0264006.1.mrna1;Target=FBgn0264006.1 1659 1830 +
Chr1	stalkie_big_nohaplotig	exon	57517729	57518049	99	-	.	Parent=FBgn0264006.1.mrna1;Target=FBgn0264006.1 1338 1658 +
Chr1	stalkie_big_nohaplotig	exon	57518125	57518414	98	-	.	Parent=FBgn0264006.1.mrna1;Target=FBgn0264006.1 1048 1337 +
Chr1	stalkie_big_nohaplotig	exon	57521056	57521186	100	-	.	Parent=FBgn0264006.1.mrna1;Target=FBgn0264006.1 917 1047 +
Chr1	stalkie_big_nohaplotig	exon	57524324	57524456	100	-	.	Parent=FBgn0264006.1.mrna1;Target=FBgn0264006.1 784 916 +
Chr1	stalkie_big_nohaplotig	exon	57524514	57525295	99	-	.	Parent=FBgn0264006.1.mrna1;Target=FBgn0264006.1 2 783 +
Chr1	stalkie_big_nohaplotig	CDS	57515332	57515412	.	-	0	Parent=FBgn0264006.1.mrna1;Target=FBgn0264006.1 1942 2022 +
Chr1	stalkie_big_nohaplotig	CDS	57516576	57516686	.	-	0	Parent=FBgn0264006.1.mrna1;Target=FBgn0264006.1 1831 1941 +
Chr1	stalkie_big_nohaplotig	CDS	57516751	57516922	.	-	1	Parent=FBgn0264006.1.mrna1;Target=FBgn0264006.1 1659 1830 +
Chr1	stalkie_big_nohaplotig	CDS	57517729	57518049	.	-	1	Parent=FBgn0264006.1.mrna1;Target=FBgn0264006.1 1338 1658 +
Chr1	stalkie_big_nohaplotig	CDS	57518125	57518414	.	-	0	Parent=FBgn0264006.1.mrna1;Target=FBgn0264006.1 1048 1337 +
Chr1	stalkie_big_nohaplotig	CDS	57521056	57521186	.	-	2	Parent=FBgn0264006.1.mrna1;Target=FBgn0264006.1 917 1047 +
Chr1	stalkie_big_nohaplotig	CDS	57524324	57524456	.	-	0	Parent=FBgn0264006.1.mrna1;Target=FBgn0264006.1 784 916 +
Chr1	stalkie_big_nohaplotig	CDS	57524514	57525293	.	-	0	Parent=FBgn0264006.1.mrna1;Target=FBgn0264006.1 4 783 +
Chr1	gffcl	locus	57554352	57554579	.	-	.	ID=RLOC_00008180;geneIDs=comp151055_c0_seq1.path1;transcripts=comp151055_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57554352	57554579	.	-	.	ID=comp151055_c0_seq1.mrna1;geneID=comp151055_c0_seq1.path1;Name=comp151055_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=226;mismatches=2;indels=0;unknowns=0;Target=comp151055_c0_seq1 228 1 .;CDS_Target=comp151055_c0_seq1 86 45 .;locus=RLOC_00008180
Chr1	stalkie_big_nohaplotig	exon	57554352	57554579	99	-	.	Parent=comp151055_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	57554494	57554535	.	-	0	Parent=comp151055_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59071166	59080194	.	-	.	ID=FBgn0086254.3.mrna1;geneID=FBgn0086254.3.path1;Name=FBgn0086254.3;Dir=sensecoverage=100.0;identity=99.4;matches=966;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008181
Chr1	stalkie_big_nohaplotig	exon	59071166	59071208	100	-	.	Parent=FBgn0086254.3.mrna1;Target=FBgn0086254.3 930 972 +
Chr1	stalkie_big_nohaplotig	exon	59076964	59077172	99	-	.	Parent=FBgn0086254.3.mrna1;Target=FBgn0086254.3 721 929 +
Chr1	stalkie_big_nohaplotig	exon	59077226	59077709	99	-	.	Parent=FBgn0086254.3.mrna1;Target=FBgn0086254.3 237 720 +
Chr1	stalkie_big_nohaplotig	exon	59077767	59077909	99	-	.	Parent=FBgn0086254.3.mrna1;Target=FBgn0086254.3 94 236 +
Chr1	stalkie_big_nohaplotig	exon	59080102	59080194	98	-	.	Parent=FBgn0086254.3.mrna1;Target=FBgn0086254.3 1 93 +
Chr1	stalkie_big_nohaplotig	CDS	59071166	59071208	.	-	1	Parent=FBgn0086254.3.mrna1;Target=FBgn0086254.3 930 972 +
Chr1	stalkie_big_nohaplotig	CDS	59076964	59077172	.	-	0	Parent=FBgn0086254.3.mrna1;Target=FBgn0086254.3 721 929 +
Chr1	stalkie_big_nohaplotig	CDS	59077226	59077709	.	-	1	Parent=FBgn0086254.3.mrna1;Target=FBgn0086254.3 237 720 +
Chr1	stalkie_big_nohaplotig	CDS	59077767	59077909	.	-	0	Parent=FBgn0086254.3.mrna1;Target=FBgn0086254.3 94 236 +
Chr1	stalkie_big_nohaplotig	CDS	59080102	59080194	.	-	0	Parent=FBgn0086254.3.mrna1;Target=FBgn0086254.3 1 93 +
Chr1	stalkie_big_nohaplotig	mRNA	59091988	59093789	.	-	.	ID=FBgn0086254.1.mrna1;geneID=FBgn0086254.1.path1;Name=FBgn0086254.1;Dir=sensecoverage=100.0;identity=99.7;matches=771;mismatches=2;indels=0;unknowns=1;locus=RLOC_00008181
Chr1	stalkie_big_nohaplotig	exon	59091988	59092075	98	-	.	Parent=FBgn0086254.1.mrna1;Target=FBgn0086254.1 687 774 +
Chr1	stalkie_big_nohaplotig	exon	59092902	59093110	99	-	.	Parent=FBgn0086254.1.mrna1;Target=FBgn0086254.1 478 686 +
Chr1	stalkie_big_nohaplotig	exon	59093313	59093789	100	-	.	Parent=FBgn0086254.1.mrna1;Target=FBgn0086254.1 1 477 +
Chr1	stalkie_big_nohaplotig	CDS	59091988	59092075	.	-	1	Parent=FBgn0086254.1.mrna1;Target=FBgn0086254.1 687 774 +
Chr1	stalkie_big_nohaplotig	CDS	59092902	59093110	.	-	0	Parent=FBgn0086254.1.mrna1;Target=FBgn0086254.1 478 686 +
Chr1	stalkie_big_nohaplotig	CDS	59093313	59093789	.	-	0	Parent=FBgn0086254.1.mrna1;Target=FBgn0086254.1 1 477 +
Chr1	stalkie_big_nohaplotig	mRNA	59093769	59105170	.	-	.	ID=comp160023_c0_seq1.mrna1;geneID=comp160023_c0_seq1.path1;Name=comp160023_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=1093;mismatches=12;indels=0;unknowns=0;locus=RLOC_00008181
Chr1	stalkie_big_nohaplotig	exon	59093769	59093799	100	-	.	Parent=comp160023_c0_seq1.mrna1;Target=comp160023_c0_seq1 1 31 -
Chr1	stalkie_big_nohaplotig	exon	59093858	59094000	100	-	.	Parent=comp160023_c0_seq1.mrna1;Target=comp160023_c0_seq1 32 174 -
Chr1	stalkie_big_nohaplotig	exon	59094062	59094161	99	-	.	Parent=comp160023_c0_seq1.mrna1;Target=comp160023_c0_seq1 175 274 -
Chr1	stalkie_big_nohaplotig	exon	59097648	59097683	88	-	.	Parent=comp160023_c0_seq1.mrna1;Target=comp160023_c0_seq1 275 310 -
Chr1	stalkie_big_nohaplotig	exon	59097741	59097988	97	-	.	Parent=comp160023_c0_seq1.mrna1;Target=comp160023_c0_seq1 311 558 -
Chr1	stalkie_big_nohaplotig	exon	59099317	59099401	100	-	.	Parent=comp160023_c0_seq1.mrna1;Target=comp160023_c0_seq1 559 643 -
Chr1	stalkie_big_nohaplotig	exon	59102118	59102522	99	-	.	Parent=comp160023_c0_seq1.mrna1;Target=comp160023_c0_seq1 644 1048 -
Chr1	stalkie_big_nohaplotig	exon	59105114	59105170	100	-	.	Parent=comp160023_c0_seq1.mrna1;Target=comp160023_c0_seq1 1049 1105 -
Chr1	stalkie_big_nohaplotig	CDS	59097782	59097988	.	-	0	Parent=comp160023_c0_seq1.mrna1;Target=comp160023_c0_seq1 352 558 .
Chr1	stalkie_big_nohaplotig	CDS	59099317	59099401	.	-	1	Parent=comp160023_c0_seq1.mrna1;Target=comp160023_c0_seq1 559 643 .
Chr1	stalkie_big_nohaplotig	CDS	59102118	59102218	.	-	0	Parent=comp160023_c0_seq1.mrna1;Target=comp160023_c0_seq1 644 744 .
Chr1	gffcl	locus	57603275	57603617	.	-	.	ID=RLOC_00008182;geneIDs=comp152098_c0_seq1.path1;transcripts=comp152098_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57603275	57603617	.	-	.	ID=comp152098_c0_seq1.mrna1;geneID=comp152098_c0_seq1.path1;Name=comp152098_c0_seq1;Dir=indeterminatecoverage=96.0;identity=96.2;matches=330;mismatches=6;indels=7;unknowns=0;Target=comp152098_c0_seq1 350 15 .;CDS_Target=comp152098_c0_seq1 171 16 .;locus=RLOC_00008182
Chr1	stalkie_big_nohaplotig	exon	57603275	57603617	96	-	.	Parent=comp152098_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	57603461	57603616	.	-	0	Parent=comp152098_c0_seq1.mrna1
Chr1	gffcl	locus	57604899	57608073	.	-	.	ID=RLOC_00008183;geneIDs=FBgn0036386.1.path1;transcripts=FBgn0036386.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57604899	57608073	.	-	.	ID=FBgn0036386.1.mrna1;geneID=FBgn0036386.1.path1;Name=FBgn0036386.1;Dir=sensecoverage=100.0;identity=98.8;matches=2964;mismatches=27;indels=9;unknowns=0;locus=RLOC_00008183
Chr1	stalkie_big_nohaplotig	exon	57604899	57606132	98	-	.	Parent=FBgn0036386.1.mrna1;Target=FBgn0036386.1 1767 2991 +
Chr1	stalkie_big_nohaplotig	exon	57606188	57606416	100	-	.	Parent=FBgn0036386.1.mrna1;Target=FBgn0036386.1 1538 1766 +
Chr1	stalkie_big_nohaplotig	exon	57606481	57607941	98	-	.	Parent=FBgn0036386.1.mrna1;Target=FBgn0036386.1 77 1537 +
Chr1	stalkie_big_nohaplotig	exon	57607998	57608073	98	-	.	Parent=FBgn0036386.1.mrna1;Target=FBgn0036386.1 1 76 +
Chr1	stalkie_big_nohaplotig	CDS	57604899	57606132	.	-	1	Parent=FBgn0036386.1.mrna1;Target=FBgn0036386.1 1767 2991 +
Chr1	stalkie_big_nohaplotig	CDS	57606188	57606416	.	-	2	Parent=FBgn0036386.1.mrna1;Target=FBgn0036386.1 1538 1766 +
Chr1	stalkie_big_nohaplotig	CDS	57606481	57607941	.	-	2	Parent=FBgn0036386.1.mrna1;Target=FBgn0036386.1 77 1537 +
Chr1	stalkie_big_nohaplotig	CDS	57607998	57608073	.	-	0	Parent=FBgn0036386.1.mrna1;Target=FBgn0036386.1 1 76 +
Chr1	gffcl	locus	57608702	57612881	.	+	.	ID=RLOC_00008184;geneIDs=FBgn0001108.1.path1;transcripts=FBgn0001108.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57608702	57612881	.	+	.	ID=FBgn0001108.1.mrna1;geneID=FBgn0001108.1.path1;Name=FBgn0001108.1;Dir=sensecoverage=100.0;identity=99.8;matches=3738;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008184
Chr1	stalkie_big_nohaplotig	exon	57608702	57610060	99	+	.	Parent=FBgn0001108.1.mrna1;Target=FBgn0001108.1 1 1359 +
Chr1	stalkie_big_nohaplotig	exon	57610497	57612881	99	+	.	Parent=FBgn0001108.1.mrna1;Target=FBgn0001108.1 1360 3744 +
Chr1	stalkie_big_nohaplotig	CDS	57608702	57610060	.	+	0	Parent=FBgn0001108.1.mrna1;Target=FBgn0001108.1 1 1359 +
Chr1	stalkie_big_nohaplotig	CDS	57610497	57612881	.	+	0	Parent=FBgn0001108.1.mrna1;Target=FBgn0001108.1 1360 3744 +
Chr1	gffcl	locus	57628547	57704113	.	+	.	ID=RLOC_00008185;geneIDs=FBgn0052137.1.path1,comp157583_c3_seq1.path1;transcripts=comp157583_c3_seq1.mrna1,FBgn0052137.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57628547	57704113	.	+	.	ID=comp157583_c3_seq1.mrna1;geneID=comp157583_c3_seq1.path1;Name=comp157583_c3_seq1;Dir=antisensecoverage=100.0;identity=98.4;matches=3211;mismatches=18;indels=34;unknowns=0;locus=RLOC_00008185
Chr1	stalkie_big_nohaplotig	exon	57628547	57629518	98	+	.	Parent=comp157583_c3_seq1.mrna1;Target=comp157583_c3_seq1 2260 3235 -
Chr1	stalkie_big_nohaplotig	exon	57631197	57631393	100	+	.	Parent=comp157583_c3_seq1.mrna1;Target=comp157583_c3_seq1 2063 2259 -
Chr1	stalkie_big_nohaplotig	exon	57697065	57697187	100	+	.	Parent=comp157583_c3_seq1.mrna1;Target=comp157583_c3_seq1 1940 2062 -
Chr1	stalkie_big_nohaplotig	exon	57697284	57697457	100	+	.	Parent=comp157583_c3_seq1.mrna1;Target=comp157583_c3_seq1 1766 1939 -
Chr1	stalkie_big_nohaplotig	exon	57697520	57697708	100	+	.	Parent=comp157583_c3_seq1.mrna1;Target=comp157583_c3_seq1 1577 1765 -
Chr1	stalkie_big_nohaplotig	exon	57698371	57698436	98	+	.	Parent=comp157583_c3_seq1.mrna1;Target=comp157583_c3_seq1 1511 1576 -
Chr1	stalkie_big_nohaplotig	exon	57698512	57698689	100	+	.	Parent=comp157583_c3_seq1.mrna1;Target=comp157583_c3_seq1 1333 1510 -
Chr1	stalkie_big_nohaplotig	exon	57698801	57699057	99	+	.	Parent=comp157583_c3_seq1.mrna1;Target=comp157583_c3_seq1 1076 1332 -
Chr1	stalkie_big_nohaplotig	exon	57702953	57703207	98	+	.	Parent=comp157583_c3_seq1.mrna1;Target=comp157583_c3_seq1 821 1075 -
Chr1	stalkie_big_nohaplotig	exon	57703268	57704113	95	+	.	Parent=comp157583_c3_seq1.mrna1;Target=comp157583_c3_seq1 1 820 -
Chr1	stalkie_big_nohaplotig	CDS	57631214	57631393	.	+	0	Parent=comp157583_c3_seq1.mrna1;Target=comp157583_c3_seq1 2063 2242 .
Chr1	stalkie_big_nohaplotig	CDS	57697065	57697187	.	+	0	Parent=comp157583_c3_seq1.mrna1;Target=comp157583_c3_seq1 1940 2062 .
Chr1	stalkie_big_nohaplotig	CDS	57697284	57697457	.	+	0	Parent=comp157583_c3_seq1.mrna1;Target=comp157583_c3_seq1 1766 1939 .
Chr1	stalkie_big_nohaplotig	CDS	57697520	57697708	.	+	0	Parent=comp157583_c3_seq1.mrna1;Target=comp157583_c3_seq1 1577 1765 .
Chr1	stalkie_big_nohaplotig	CDS	57698371	57698436	.	+	0	Parent=comp157583_c3_seq1.mrna1;Target=comp157583_c3_seq1 1511 1576 .
Chr1	stalkie_big_nohaplotig	CDS	57698512	57698689	.	+	0	Parent=comp157583_c3_seq1.mrna1;Target=comp157583_c3_seq1 1333 1510 .
Chr1	stalkie_big_nohaplotig	CDS	57698801	57699057	.	+	2	Parent=comp157583_c3_seq1.mrna1;Target=comp157583_c3_seq1 1076 1332 .
Chr1	stalkie_big_nohaplotig	CDS	57702953	57703207	.	+	0	Parent=comp157583_c3_seq1.mrna1;Target=comp157583_c3_seq1 821 1075 .
Chr1	stalkie_big_nohaplotig	CDS	57703268	57703426	.	+	0	Parent=comp157583_c3_seq1.mrna1;Target=comp157583_c3_seq1 662 820 .
Chr1	stalkie_big_nohaplotig	mRNA	57631055	57703423	.	+	.	ID=FBgn0052137.1.mrna1;geneID=FBgn0052137.1.path1;Name=FBgn0052137.1;Dir=sensecoverage=100.0;identity=99.7;matches=1732;mismatches=5;indels=0;unknowns=0;locus=RLOC_00008185
Chr1	stalkie_big_nohaplotig	exon	57631055	57631393	100	+	.	Parent=FBgn0052137.1.mrna1;Target=FBgn0052137.1 1 339 +
Chr1	stalkie_big_nohaplotig	exon	57697065	57697187	100	+	.	Parent=FBgn0052137.1.mrna1;Target=FBgn0052137.1 340 462 +
Chr1	stalkie_big_nohaplotig	exon	57697284	57697457	100	+	.	Parent=FBgn0052137.1.mrna1;Target=FBgn0052137.1 463 636 +
Chr1	stalkie_big_nohaplotig	exon	57697520	57697708	100	+	.	Parent=FBgn0052137.1.mrna1;Target=FBgn0052137.1 637 825 +
Chr1	stalkie_big_nohaplotig	exon	57698371	57698436	98	+	.	Parent=FBgn0052137.1.mrna1;Target=FBgn0052137.1 826 891 +
Chr1	stalkie_big_nohaplotig	exon	57698512	57698689	100	+	.	Parent=FBgn0052137.1.mrna1;Target=FBgn0052137.1 892 1069 +
Chr1	stalkie_big_nohaplotig	exon	57698801	57699057	99	+	.	Parent=FBgn0052137.1.mrna1;Target=FBgn0052137.1 1070 1326 +
Chr1	stalkie_big_nohaplotig	exon	57702953	57703207	98	+	.	Parent=FBgn0052137.1.mrna1;Target=FBgn0052137.1 1327 1581 +
Chr1	stalkie_big_nohaplotig	exon	57703268	57703423	100	+	.	Parent=FBgn0052137.1.mrna1;Target=FBgn0052137.1 1582 1737 +
Chr1	stalkie_big_nohaplotig	CDS	57631055	57631393	.	+	0	Parent=FBgn0052137.1.mrna1;Target=FBgn0052137.1 1 339 +
Chr1	stalkie_big_nohaplotig	CDS	57697065	57697187	.	+	0	Parent=FBgn0052137.1.mrna1;Target=FBgn0052137.1 340 462 +
Chr1	stalkie_big_nohaplotig	CDS	57697284	57697457	.	+	0	Parent=FBgn0052137.1.mrna1;Target=FBgn0052137.1 463 636 +
Chr1	stalkie_big_nohaplotig	CDS	57697520	57697708	.	+	0	Parent=FBgn0052137.1.mrna1;Target=FBgn0052137.1 637 825 +
Chr1	stalkie_big_nohaplotig	CDS	57698371	57698436	.	+	0	Parent=FBgn0052137.1.mrna1;Target=FBgn0052137.1 826 891 +
Chr1	stalkie_big_nohaplotig	CDS	57698512	57698689	.	+	0	Parent=FBgn0052137.1.mrna1;Target=FBgn0052137.1 892 1069 +
Chr1	stalkie_big_nohaplotig	CDS	57698801	57699057	.	+	2	Parent=FBgn0052137.1.mrna1;Target=FBgn0052137.1 1070 1326 +
Chr1	stalkie_big_nohaplotig	CDS	57702953	57703207	.	+	0	Parent=FBgn0052137.1.mrna1;Target=FBgn0052137.1 1327 1581 +
Chr1	stalkie_big_nohaplotig	CDS	57703268	57703423	.	+	0	Parent=FBgn0052137.1.mrna1;Target=FBgn0052137.1 1582 1737 +
Chr1	stalkie_big_nohaplotig	mRNA	57824889	57827330	.	+	.	ID=comp163354_c0_seq1.mrna1;geneID=comp163354_c0_seq1.path1;Name=comp163354_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=2218;mismatches=32;indels=38;unknowns=0;Target=comp163354_c0_seq1 1011 970 .;locus=RLOC_00008186
Chr1	stalkie_big_nohaplotig	exon	57824889	57826861	96	+	.	Parent=comp163354_c0_seq1.mrna1;Target=comp163354_c0_seq1 1994 1 .
Chr1	stalkie_big_nohaplotig	exon	57826968	57826991	100	+	.	Parent=comp163354_c0_seq1.mrna1;Target=comp163354_c0_seq1 2018 1995 .
Chr1	stalkie_big_nohaplotig	exon	57827069	57827330	98	+	.	Parent=comp163354_c0_seq1.mrna1;Target=comp163354_c0_seq1 2279 2019 .
Chr1	stalkie_big_nohaplotig	CDS	57825864	57825905	.	+	0	Parent=comp163354_c0_seq1.mrna1
Chr1	gffcl	locus	57691807	57692925	.	-	.	ID=RLOC_00008187;geneIDs=comp80737_c1_seq1.path1;transcripts=comp80737_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57691807	57692925	.	-	.	ID=comp80737_c1_seq1.mrna1;geneID=comp80737_c1_seq1.path1;Name=comp80737_c1_seq1;Dir=sensecoverage=100.0;identity=90.4;matches=526;mismatches=38;indels=18;unknowns=0;locus=RLOC_00008187
Chr1	stalkie_big_nohaplotig	exon	57691807	57692295	89	-	.	Parent=comp80737_c1_seq1.mrna1;Target=comp80737_c1_seq1 77 581 +
Chr1	stalkie_big_nohaplotig	exon	57692850	57692925	96	-	.	Parent=comp80737_c1_seq1.mrna1;Target=comp80737_c1_seq1 1 76 +
Chr1	stalkie_big_nohaplotig	CDS	57692239	57692295	.	-	0	Parent=comp80737_c1_seq1.mrna1;Target=comp80737_c1_seq1 77 133 +
Chr1	stalkie_big_nohaplotig	CDS	57692850	57692924	.	-	0	Parent=comp80737_c1_seq1.mrna1;Target=comp80737_c1_seq1 2 76 +
Chr1	gffcl	locus	57711377	57718981	.	-	.	ID=RLOC_00008189;geneIDs=ORF9.path1;transcripts=ORF9.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57711377	57718981	.	-	.	ID=ORF9.mrna1;geneID=ORF9.path1;Name=ORF9;Dir=sensecoverage=100.0;identity=99.5;matches=4929;mismatches=23;indels=0;unknowns=0;locus=RLOC_00008189
Chr1	stalkie_big_nohaplotig	exon	57711377	57712909	98	-	.	Parent=ORF9.mrna1;Target=ORF9 3421 4953 +
Chr1	stalkie_big_nohaplotig	exon	57712965	57713179	99	-	.	Parent=ORF9.mrna1;Target=ORF9 3206 3420 +
Chr1	stalkie_big_nohaplotig	exon	57714490	57716316	99	-	.	Parent=ORF9.mrna1;Target=ORF9 1379 3205 +
Chr1	stalkie_big_nohaplotig	exon	57716377	57716538	100	-	.	Parent=ORF9.mrna1;Target=ORF9 1217 1378 +
Chr1	stalkie_big_nohaplotig	exon	57716594	57716731	99	-	.	Parent=ORF9.mrna1;Target=ORF9 1079 1216 +
Chr1	stalkie_big_nohaplotig	exon	57717473	57717637	100	-	.	Parent=ORF9.mrna1;Target=ORF9 914 1078 +
Chr1	stalkie_big_nohaplotig	exon	57717695	57717907	100	-	.	Parent=ORF9.mrna1;Target=ORF9 701 913 +
Chr1	stalkie_big_nohaplotig	exon	57717968	57718111	100	-	.	Parent=ORF9.mrna1;Target=ORF9 557 700 +
Chr1	stalkie_big_nohaplotig	exon	57718186	57718326	99	-	.	Parent=ORF9.mrna1;Target=ORF9 416 556 +
Chr1	stalkie_big_nohaplotig	exon	57718439	57718561	100	-	.	Parent=ORF9.mrna1;Target=ORF9 293 415 +
Chr1	stalkie_big_nohaplotig	exon	57718628	57718806	100	-	.	Parent=ORF9.mrna1;Target=ORF9 114 292 +
Chr1	stalkie_big_nohaplotig	exon	57718870	57718981	100	-	.	Parent=ORF9.mrna1;Target=ORF9 2 113 +
Chr1	stalkie_big_nohaplotig	CDS	57711377	57712909	.	-	0	Parent=ORF9.mrna1;Target=ORF9 3421 4953 +
Chr1	stalkie_big_nohaplotig	CDS	57712965	57713179	.	-	2	Parent=ORF9.mrna1;Target=ORF9 3206 3420 +
Chr1	stalkie_big_nohaplotig	CDS	57714490	57716316	.	-	2	Parent=ORF9.mrna1;Target=ORF9 1379 3205 +
Chr1	stalkie_big_nohaplotig	CDS	57716377	57716538	.	-	2	Parent=ORF9.mrna1;Target=ORF9 1217 1378 +
Chr1	stalkie_big_nohaplotig	CDS	57716594	57716731	.	-	2	Parent=ORF9.mrna1;Target=ORF9 1079 1216 +
Chr1	stalkie_big_nohaplotig	CDS	57717473	57717637	.	-	2	Parent=ORF9.mrna1;Target=ORF9 914 1078 +
Chr1	stalkie_big_nohaplotig	CDS	57717695	57717907	.	-	2	Parent=ORF9.mrna1;Target=ORF9 701 913 +
Chr1	stalkie_big_nohaplotig	CDS	57717968	57718111	.	-	2	Parent=ORF9.mrna1;Target=ORF9 557 700 +
Chr1	stalkie_big_nohaplotig	CDS	57718186	57718326	.	-	2	Parent=ORF9.mrna1;Target=ORF9 416 556 +
Chr1	stalkie_big_nohaplotig	CDS	57718439	57718561	.	-	2	Parent=ORF9.mrna1;Target=ORF9 293 415 +
Chr1	stalkie_big_nohaplotig	CDS	57718628	57718806	.	-	1	Parent=ORF9.mrna1;Target=ORF9 114 292 +
Chr1	stalkie_big_nohaplotig	CDS	57718870	57718979	.	-	0	Parent=ORF9.mrna1;Target=ORF9 4 113 +
Chr1	gffcl	locus	57722227	57723884	.	+	.	ID=RLOC_00008190;geneIDs=FBgn0036335.1.path1;transcripts=FBgn0036335.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57722227	57723884	.	+	.	ID=FBgn0036335.1.mrna1;geneID=FBgn0036335.1.path1;Name=FBgn0036335.1;Dir=sensecoverage=100.0;identity=100.0;matches=453;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008190
Chr1	stalkie_big_nohaplotig	exon	57722227	57722316	100	+	.	Parent=FBgn0036335.1.mrna1;Target=FBgn0036335.1 1 90 +
Chr1	stalkie_big_nohaplotig	exon	57722418	57722528	100	+	.	Parent=FBgn0036335.1.mrna1;Target=FBgn0036335.1 91 201 +
Chr1	stalkie_big_nohaplotig	exon	57723574	57723671	100	+	.	Parent=FBgn0036335.1.mrna1;Target=FBgn0036335.1 202 299 +
Chr1	stalkie_big_nohaplotig	exon	57723731	57723884	100	+	.	Parent=FBgn0036335.1.mrna1;Target=FBgn0036335.1 300 453 +
Chr1	stalkie_big_nohaplotig	CDS	57722227	57722316	.	+	0	Parent=FBgn0036335.1.mrna1;Target=FBgn0036335.1 1 90 +
Chr1	stalkie_big_nohaplotig	CDS	57722418	57722528	.	+	0	Parent=FBgn0036335.1.mrna1;Target=FBgn0036335.1 91 201 +
Chr1	stalkie_big_nohaplotig	CDS	57723574	57723671	.	+	0	Parent=FBgn0036335.1.mrna1;Target=FBgn0036335.1 202 299 +
Chr1	stalkie_big_nohaplotig	CDS	57723731	57723884	.	+	1	Parent=FBgn0036335.1.mrna1;Target=FBgn0036335.1 300 453 +
Chr1	gffcl	locus	57724079	57724681	.	-	.	ID=RLOC_00008191;geneIDs=FBgn0036334.1.path1;transcripts=FBgn0036334.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57724079	57724681	.	-	.	ID=FBgn0036334.1.mrna1;geneID=FBgn0036334.1.path1;Name=FBgn0036334.1;Dir=sensecoverage=100.0;identity=100.0;matches=318;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008191
Chr1	stalkie_big_nohaplotig	exon	57724079	57724219	100	-	.	Parent=FBgn0036334.1.mrna1;Target=FBgn0036334.1 178 318 +
Chr1	stalkie_big_nohaplotig	exon	57724280	57724444	100	-	.	Parent=FBgn0036334.1.mrna1;Target=FBgn0036334.1 13 177 +
Chr1	stalkie_big_nohaplotig	exon	57724670	57724681	100	-	.	Parent=FBgn0036334.1.mrna1;Target=FBgn0036334.1 1 12 +
Chr1	stalkie_big_nohaplotig	CDS	57724079	57724219	.	-	0	Parent=FBgn0036334.1.mrna1;Target=FBgn0036334.1 178 318 +
Chr1	stalkie_big_nohaplotig	CDS	57724280	57724444	.	-	0	Parent=FBgn0036334.1.mrna1;Target=FBgn0036334.1 13 177 +
Chr1	stalkie_big_nohaplotig	CDS	57724670	57724681	.	-	0	Parent=FBgn0036334.1.mrna1;Target=FBgn0036334.1 1 12 +
Chr1	gffcl	locus	57726967	57728083	.	+	.	ID=RLOC_00008192;geneIDs=FBgn0036336.1.path1;transcripts=FBgn0036336.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57726967	57728083	.	+	.	ID=FBgn0036336.1.mrna1;geneID=FBgn0036336.1.path1;Name=FBgn0036336.1;Dir=sensecoverage=100.0;identity=99.1;matches=886;mismatches=8;indels=0;unknowns=0;locus=RLOC_00008192
Chr1	stalkie_big_nohaplotig	exon	57726967	57727203	100	+	.	Parent=FBgn0036336.1.mrna1;Target=FBgn0036336.1 1 237 +
Chr1	stalkie_big_nohaplotig	exon	57727352	57727723	98	+	.	Parent=FBgn0036336.1.mrna1;Target=FBgn0036336.1 238 609 +
Chr1	stalkie_big_nohaplotig	exon	57727799	57728083	99	+	.	Parent=FBgn0036336.1.mrna1;Target=FBgn0036336.1 610 894 +
Chr1	stalkie_big_nohaplotig	CDS	57726967	57727203	.	+	0	Parent=FBgn0036336.1.mrna1;Target=FBgn0036336.1 1 237 +
Chr1	stalkie_big_nohaplotig	CDS	57727352	57727723	.	+	0	Parent=FBgn0036336.1.mrna1;Target=FBgn0036336.1 238 609 +
Chr1	stalkie_big_nohaplotig	CDS	57727799	57728083	.	+	0	Parent=FBgn0036336.1.mrna1;Target=FBgn0036336.1 610 894 +
Chr1	gffcl	locus	57736337	57736533	.	-	.	ID=RLOC_00008194;geneIDs=comp116714_c0_seq1.path3;transcripts=comp116714_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	57736337	57736533	.	-	.	ID=comp116714_c0_seq1.mrna3;geneID=comp116714_c0_seq1.path3;Name=comp116714_c0_seq1;Dir=indeterminatecoverage=86.2;identity=84.5;matches=169;mismatches=22;indels=9;unknowns=0;Target=comp116714_c0_seq1 225 32 .;CDS_Target=comp116714_c0_seq1 218 87 .;locus=RLOC_00008194
Chr1	stalkie_big_nohaplotig	exon	57736337	57736533	84	-	.	Parent=comp116714_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	57736344	57736478	.	-	0	Parent=comp116714_c0_seq1.mrna3
Chr1	gffcl	locus	57737955	57741017	.	-	.	ID=RLOC_00008195;geneIDs=FBgn0036316.2.path1;transcripts=FBgn0036316.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57737955	57741017	.	-	.	ID=FBgn0036316.2.mrna1;geneID=FBgn0036316.2.path1;Name=FBgn0036316.2;Dir=sensecoverage=100.0;identity=99.9;matches=1436;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008195
Chr1	stalkie_big_nohaplotig	exon	57737955	57738524	100	-	.	Parent=FBgn0036316.2.mrna1;Target=FBgn0036316.2 868 1437 +
Chr1	stalkie_big_nohaplotig	exon	57740081	57740332	100	-	.	Parent=FBgn0036316.2.mrna1;Target=FBgn0036316.2 616 867 +
Chr1	stalkie_big_nohaplotig	exon	57740403	57741017	99	-	.	Parent=FBgn0036316.2.mrna1;Target=FBgn0036316.2 1 615 +
Chr1	stalkie_big_nohaplotig	CDS	57737955	57738524	.	-	0	Parent=FBgn0036316.2.mrna1;Target=FBgn0036316.2 868 1437 +
Chr1	stalkie_big_nohaplotig	CDS	57740081	57740332	.	-	0	Parent=FBgn0036316.2.mrna1;Target=FBgn0036316.2 616 867 +
Chr1	stalkie_big_nohaplotig	CDS	57740403	57741017	.	-	0	Parent=FBgn0036316.2.mrna1;Target=FBgn0036316.2 1 615 +
Chr1	gffcl	locus	57755157	57756035	.	+	.	ID=RLOC_00008196;geneIDs=comp157503_c0_seq1.path1;transcripts=comp157503_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57755157	57756035	.	+	.	ID=comp157503_c0_seq1.mrna1;geneID=comp157503_c0_seq1.path1;Name=comp157503_c0_seq1;Dir=indeterminatecoverage=97.0;identity=99.3;matches=874;mismatches=5;indels=1;unknowns=0;Target=comp157503_c0_seq1 907 28 .;CDS_Target=comp157503_c0_seq1 366 190 .;locus=RLOC_00008196
Chr1	stalkie_big_nohaplotig	exon	57755157	57756035	99	+	.	Parent=comp157503_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	57755319	57755495	.	+	0	Parent=comp157503_c0_seq1.mrna1
Chr1	gffcl	locus	57821208	57822127	.	+	.	ID=RLOC_00008197;geneIDs=comp148350_c1_seq1.path1;transcripts=comp148350_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57821208	57822127	.	+	.	ID=comp148350_c1_seq1.mrna1;geneID=comp148350_c1_seq1.path1;Name=comp148350_c1_seq1;Dir=antisensecoverage=95.6;identity=100.0;matches=843;mismatches=0;indels=0;unknowns=0;Target=comp148350_c1_seq1 573 659 .;locus=RLOC_00008197
Chr1	stalkie_big_nohaplotig	exon	57821208	57821371	100	+	.	Parent=comp148350_c1_seq1.mrna1;Target=comp148350_c1_seq1 719 882 -
Chr1	stalkie_big_nohaplotig	exon	57821449	57822127	100	+	.	Parent=comp148350_c1_seq1.mrna1;Target=comp148350_c1_seq1 40 718 -
Chr1	stalkie_big_nohaplotig	CDS	57821508	57821594	.	+	0	Parent=comp148350_c1_seq1.mrna1
Chr1	gffcl	locus	57822915	57833785	.	-	.	ID=RLOC_00008198;geneIDs=FBgn0036317.1.path1;transcripts=FBgn0036317.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57822915	57833785	.	-	.	ID=FBgn0036317.1.mrna1;geneID=FBgn0036317.1.path1;Name=FBgn0036317.1;Dir=sensecoverage=100.0;identity=99.4;matches=2493;mismatches=15;indels=0;unknowns=0;locus=RLOC_00008198
Chr1	stalkie_big_nohaplotig	exon	57822915	57823172	99	-	.	Parent=FBgn0036317.1.mrna1;Target=FBgn0036317.1 2251 2508 +
Chr1	stalkie_big_nohaplotig	exon	57823240	57823917	98	-	.	Parent=FBgn0036317.1.mrna1;Target=FBgn0036317.1 1573 2250 +
Chr1	stalkie_big_nohaplotig	exon	57823977	57824087	97	-	.	Parent=FBgn0036317.1.mrna1;Target=FBgn0036317.1 1462 1572 +
Chr1	stalkie_big_nohaplotig	exon	57827825	57827931	100	-	.	Parent=FBgn0036317.1.mrna1;Target=FBgn0036317.1 1355 1461 +
Chr1	stalkie_big_nohaplotig	exon	57831806	57832540	100	-	.	Parent=FBgn0036317.1.mrna1;Target=FBgn0036317.1 620 1354 +
Chr1	stalkie_big_nohaplotig	exon	57832727	57833302	99	-	.	Parent=FBgn0036317.1.mrna1;Target=FBgn0036317.1 44 619 +
Chr1	stalkie_big_nohaplotig	exon	57833743	57833785	100	-	.	Parent=FBgn0036317.1.mrna1;Target=FBgn0036317.1 1 43 +
Chr1	stalkie_big_nohaplotig	CDS	57822915	57823172	.	-	0	Parent=FBgn0036317.1.mrna1;Target=FBgn0036317.1 2251 2508 +
Chr1	stalkie_big_nohaplotig	CDS	57823240	57823917	.	-	0	Parent=FBgn0036317.1.mrna1;Target=FBgn0036317.1 1573 2250 +
Chr1	stalkie_big_nohaplotig	CDS	57823977	57824087	.	-	0	Parent=FBgn0036317.1.mrna1;Target=FBgn0036317.1 1462 1572 +
Chr1	stalkie_big_nohaplotig	CDS	57827825	57827931	.	-	2	Parent=FBgn0036317.1.mrna1;Target=FBgn0036317.1 1355 1461 +
Chr1	stalkie_big_nohaplotig	CDS	57831806	57832540	.	-	2	Parent=FBgn0036317.1.mrna1;Target=FBgn0036317.1 620 1354 +
Chr1	stalkie_big_nohaplotig	CDS	57832727	57833302	.	-	2	Parent=FBgn0036317.1.mrna1;Target=FBgn0036317.1 44 619 +
Chr1	stalkie_big_nohaplotig	CDS	57833743	57833785	.	-	0	Parent=FBgn0036317.1.mrna1;Target=FBgn0036317.1 1 43 +
Chr1	gffcl	locus	57844355	57844913	.	-	.	ID=RLOC_00008200;geneIDs=CPIJ017423.path6;transcripts=CPIJ017423.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	57844355	57844913	.	-	.	ID=CPIJ017423.mrna6;geneID=CPIJ017423.path6;Name=CPIJ017423;Dir=indeterminatecoverage=93.3;identity=98.7;matches=552;mismatches=5;indels=2;unknowns=0;Target=CPIJ017423 597 41 .;CDS_Target=CPIJ017423 597 43 .;locus=RLOC_00008200
Chr1	stalkie_big_nohaplotig	exon	57844355	57844913	98	-	.	Parent=CPIJ017423.mrna6
Chr1	stalkie_big_nohaplotig	CDS	57844355	57844911	.	-	0	Parent=CPIJ017423.mrna6
Chr1	gffcl	locus	57847128	57848885	.	.	.	ID=RLOC_00008201;geneIDs=FBgn0036318.1.path1,comp48002_c0_seq1.path1;transcripts=FBgn0036318.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57847128	57848643	.	+	.	ID=FBgn0036318.1.mrna1;geneID=FBgn0036318.1.path1;Name=FBgn0036318.1;Dir=sensecoverage=99.5;identity=98.8;matches=1006;mismatches=3;indels=9;unknowns=0;locus=RLOC_00008201
Chr1	stalkie_big_nohaplotig	exon	57847128	57847213	100	+	.	Parent=FBgn0036318.1.mrna1;Target=FBgn0036318.1 1 86 +
Chr1	stalkie_big_nohaplotig	exon	57847475	57847649	98	+	.	Parent=FBgn0036318.1.mrna1;Target=FBgn0036318.1 87 261 +
Chr1	stalkie_big_nohaplotig	exon	57847713	57848079	100	+	.	Parent=FBgn0036318.1.mrna1;Target=FBgn0036318.1 262 628 +
Chr1	stalkie_big_nohaplotig	exon	57848254	57848643	97	+	.	Parent=FBgn0036318.1.mrna1;Target=FBgn0036318.1 629 1009 +
Chr1	stalkie_big_nohaplotig	CDS	57847128	57847213	.	+	0	Parent=FBgn0036318.1.mrna1;Target=FBgn0036318.1 1 86 +
Chr1	stalkie_big_nohaplotig	CDS	57847475	57847649	.	+	1	Parent=FBgn0036318.1.mrna1;Target=FBgn0036318.1 87 261 +
Chr1	stalkie_big_nohaplotig	CDS	57847713	57848079	.	+	0	Parent=FBgn0036318.1.mrna1;Target=FBgn0036318.1 262 628 +
Chr1	stalkie_big_nohaplotig	CDS	57848254	57848642	.	+	2	Parent=FBgn0036318.1.mrna1;Target=FBgn0036318.1 629 1008 +
Chr1	gffcl	locus	57851638	57851939	.	-	.	ID=RLOC_00008202;geneIDs=comp135594_c0_seq1.path1;transcripts=comp135594_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57851638	57851939	.	-	.	ID=comp135594_c0_seq1.mrna1;geneID=comp135594_c0_seq1.path1;Name=comp135594_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=302;mismatches=0;indels=1;unknowns=0;Target=comp135594_c0_seq1 303 1 .;CDS_Target=comp135594_c0_seq1 93 1 .;locus=RLOC_00008202
Chr1	stalkie_big_nohaplotig	exon	57851638	57851939	99	-	.	Parent=comp135594_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	57851848	57851939	.	-	0	Parent=comp135594_c0_seq1.mrna1
Chr1	gffcl	locus	57856083	57857808	.	-	.	ID=RLOC_00008203;geneIDs=comp150878_c0_seq1.path1;transcripts=comp150878_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57856083	57857808	.	-	.	ID=comp150878_c0_seq1.mrna1;geneID=comp150878_c0_seq1.path1;Name=comp150878_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=1575;mismatches=4;indels=1;unknowns=0;locus=RLOC_00008203
Chr1	stalkie_big_nohaplotig	exon	57856083	57857375	99	-	.	Parent=comp150878_c0_seq1.mrna1;Target=comp150878_c0_seq1 1 1293 -
Chr1	stalkie_big_nohaplotig	exon	57857442	57857605	100	-	.	Parent=comp150878_c0_seq1.mrna1;Target=comp150878_c0_seq1 1294 1457 -
Chr1	stalkie_big_nohaplotig	exon	57857686	57857808	99	-	.	Parent=comp150878_c0_seq1.mrna1;Target=comp150878_c0_seq1 1458 1579 -
Chr1	stalkie_big_nohaplotig	CDS	57856390	57857375	.	-	2	Parent=comp150878_c0_seq1.mrna1;Target=comp150878_c0_seq1 308 1293 .
Chr1	stalkie_big_nohaplotig	CDS	57857442	57857592	.	-	0	Parent=comp150878_c0_seq1.mrna1;Target=comp150878_c0_seq1 1294 1444 .
Chr1	gffcl	locus	57865885	57866573	.	+	.	ID=RLOC_00008204;geneIDs=comp150695_c0_seq1.path1;transcripts=comp150695_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57865885	57866573	.	+	.	ID=comp150695_c0_seq1.mrna1;geneID=comp150695_c0_seq1.path1;Name=comp150695_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=670;mismatches=7;indels=13;unknowns=0;Target=comp150695_c0_seq1 678 1 .;CDS_Target=comp150695_c0_seq1 628 563 .;locus=RLOC_00008204
Chr1	stalkie_big_nohaplotig	exon	57865885	57866573	97	+	.	Parent=comp150695_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	57866458	57866523	.	+	0	Parent=comp150695_c0_seq1.mrna1
Chr1	gffcl	locus	57873628	57874276	.	-	.	ID=RLOC_00008205;geneIDs=comp161521_c0_seq1.path1;transcripts=comp161521_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57873628	57874276	.	-	.	ID=comp161521_c0_seq1.mrna1;geneID=comp161521_c0_seq1.path1;Name=comp161521_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=648;mismatches=1;indels=0;unknowns=0;Target=comp161521_c0_seq1 649 1 .;CDS_Target=comp161521_c0_seq1 215 144 .;locus=RLOC_00008205
Chr1	stalkie_big_nohaplotig	exon	57873628	57874276	99	-	.	Parent=comp161521_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	57874062	57874133	.	-	0	Parent=comp161521_c0_seq1.mrna1
Chr1	gffcl	locus	57875518	57876939	.	-	.	ID=RLOC_00008206;geneIDs=comp154915_c0_seq1.path1;transcripts=comp154915_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57875518	57876939	.	-	.	ID=comp154915_c0_seq1.mrna1;geneID=comp154915_c0_seq1.path1;Name=comp154915_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.2;matches=1410;mismatches=12;indels=0;unknowns=0;Target=comp154915_c0_seq1 1422 1 .;CDS_Target=comp154915_c0_seq1 248 126 .;locus=RLOC_00008206
Chr1	stalkie_big_nohaplotig	exon	57875518	57876939	99	-	.	Parent=comp154915_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	57876692	57876814	.	-	0	Parent=comp154915_c0_seq1.mrna1
Chr1	gffcl	locus	57912559	57912677	.	-	.	ID=RLOC_00008207;geneIDs=comp149297_c0_seq1.path1;transcripts=comp149297_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57912559	57912677	.	-	.	ID=comp149297_c0_seq1.mrna1;geneID=comp149297_c0_seq1.path1;Name=comp149297_c0_seq1;Dir=indeterminatecoverage=18.4;identity=99.2;matches=118;mismatches=1;indels=0;unknowns=0;Target=comp149297_c0_seq1 119 1 .;CDS_Target=comp149297_c0_seq1 105 1 .;locus=RLOC_00008207
Chr1	stalkie_big_nohaplotig	exon	57912559	57912677	99	-	.	Parent=comp149297_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	57912573	57912677	.	-	0	Parent=comp149297_c0_seq1.mrna1
Chr1	gffcl	locus	57925073	58431292	.	.	.	ID=RLOC_00008208;geneIDs=comp147144_c0_seq1.path1,comp157618_c0_seq1.path1;transcripts=comp147144_c0_seq1.mrna1,comp157618_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57925073	58431292	.	-	.	ID=comp147144_c0_seq1.mrna1;geneID=comp147144_c0_seq1.path1;Name=comp147144_c0_seq1;Dir=indeterminatecoverage=91.3;identity=95.4;matches=289;mismatches=13;indels=1;unknowns=0;Target=comp147144_c0_seq1 64 21 .;locus=RLOC_00008208
Chr1	stalkie_big_nohaplotig	exon	57925073	57925112	87	-	.	Parent=comp147144_c0_seq1.mrna1;Target=comp147144_c0_seq1 387 347 .
Chr1	stalkie_big_nohaplotig	exon	57930476	57930484	100	-	.	Parent=comp147144_c0_seq1.mrna1;Target=comp147144_c0_seq1 345 337 .
Chr1	stalkie_big_nohaplotig	exon	57931974	57931979	100	-	.	Parent=comp147144_c0_seq1.mrna1;Target=comp147144_c0_seq1 336 331 .
Chr1	stalkie_big_nohaplotig	exon	57939600	57939605	100	-	.	Parent=comp147144_c0_seq1.mrna1;Target=comp147144_c0_seq1 330 325 .
Chr1	stalkie_big_nohaplotig	exon	57963572	57963575	100	-	.	Parent=comp147144_c0_seq1.mrna1;Target=comp147144_c0_seq1 324 321 .
Chr1	stalkie_big_nohaplotig	exon	57985782	57985793	100	-	.	Parent=comp147144_c0_seq1.mrna1;Target=comp147144_c0_seq1 320 309 .
Chr1	stalkie_big_nohaplotig	exon	57989779	57989784	100	-	.	Parent=comp147144_c0_seq1.mrna1;Target=comp147144_c0_seq1 308 303 .
Chr1	stalkie_big_nohaplotig	exon	57991782	57991784	100	-	.	Parent=comp147144_c0_seq1.mrna1;Target=comp147144_c0_seq1 302 300 .
Chr1	stalkie_big_nohaplotig	exon	57992107	57992113	100	-	.	Parent=comp147144_c0_seq1.mrna1;Target=comp147144_c0_seq1 299 293 .
Chr1	stalkie_big_nohaplotig	exon	57992116	57992123	100	-	.	Parent=comp147144_c0_seq1.mrna1;Target=comp147144_c0_seq1 276 269 .
Chr1	stalkie_big_nohaplotig	exon	57997458	57997460	100	-	.	Parent=comp147144_c0_seq1.mrna1;Target=comp147144_c0_seq1 268 266 .
Chr1	stalkie_big_nohaplotig	exon	57999139	57999152	100	-	.	Parent=comp147144_c0_seq1.mrna1;Target=comp147144_c0_seq1 263 250 .
Chr1	stalkie_big_nohaplotig	exon	58431088	58431226	94	-	.	Parent=comp147144_c0_seq1.mrna1;Target=comp147144_c0_seq1 248 110 .
Chr1	stalkie_big_nohaplotig	exon	58431249	58431292	97	-	.	Parent=comp147144_c0_seq1.mrna1;Target=comp147144_c0_seq1 64 21 .
Chr1	stalkie_big_nohaplotig	CDS	58431249	58431292	.	-	0	Parent=comp147144_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57988966	57989865	.	+	.	ID=comp157618_c0_seq1.mrna1;geneID=comp157618_c0_seq1.path1;Name=comp157618_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=900;mismatches=0;indels=0;unknowns=0;Target=comp157618_c0_seq1 900 1 .;CDS_Target=comp157618_c0_seq1 602 498 .;locus=RLOC_00008208
Chr1	stalkie_big_nohaplotig	exon	57988966	57989865	100	+	.	Parent=comp157618_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	57989463	57989567	.	+	0	Parent=comp157618_c0_seq1.mrna1
Chr1	gffcl	locus	57929568	57933569	.	-	.	ID=RLOC_00008209;geneIDs=comp158466_c0_seq1.path1;transcripts=comp158466_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57929568	57933569	.	-	.	ID=comp158466_c0_seq1.mrna1;geneID=comp158466_c0_seq1.path1;Name=comp158466_c0_seq1;Dir=antisensecoverage=99.0;identity=98.9;matches=1126;mismatches=11;indels=1;unknowns=0;Target=comp158466_c0_seq1 697 1086 .;locus=RLOC_00008209
Chr1	stalkie_big_nohaplotig	exon	57929568	57930156	98	-	.	Parent=comp158466_c0_seq1.mrna1;Target=comp158466_c0_seq1 1 590 -
Chr1	stalkie_big_nohaplotig	exon	57932948	57933015	98	-	.	Parent=comp158466_c0_seq1.mrna1;Target=comp158466_c0_seq1 591 658 -
Chr1	stalkie_big_nohaplotig	exon	57933090	57933569	99	-	.	Parent=comp158466_c0_seq1.mrna1;Target=comp158466_c0_seq1 659 1138 -
Chr1	stalkie_big_nohaplotig	CDS	57933128	57933517	.	-	0	Parent=comp158466_c0_seq1.mrna1
Chr1	gffcl	locus	57955860	57956639	.	+	.	ID=RLOC_00008210;geneIDs=comp150814_c0_seq1.path1;transcripts=comp150814_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57955860	57956639	.	+	.	ID=comp150814_c0_seq1.mrna1;geneID=comp150814_c0_seq1.path1;Name=comp150814_c0_seq1;Dir=indeterminatecoverage=98.1;identity=100.0;matches=780;mismatches=0;indels=0;unknowns=0;Target=comp150814_c0_seq1 794 15 .;CDS_Target=comp150814_c0_seq1 310 185 .;locus=RLOC_00008210
Chr1	stalkie_big_nohaplotig	exon	57955860	57956639	100	+	.	Parent=comp150814_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	57956030	57956155	.	+	0	Parent=comp150814_c0_seq1.mrna1
Chr1	gffcl	locus	57957708	57958526	.	-	.	ID=RLOC_00008211;geneIDs=comp115055_c0_seq1.path1;transcripts=comp115055_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57957708	57958526	.	-	.	ID=comp115055_c0_seq1.mrna1;geneID=comp115055_c0_seq1.path1;Name=comp115055_c0_seq1;Dir=indeterminatecoverage=97.7;identity=100.0;matches=819;mismatches=0;indels=0;unknowns=0;Target=comp115055_c0_seq1 838 20 .;CDS_Target=comp115055_c0_seq1 575 66 .;locus=RLOC_00008211
Chr1	stalkie_big_nohaplotig	exon	57957708	57958526	100	-	.	Parent=comp115055_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	57957971	57958480	.	-	0	Parent=comp115055_c0_seq1.mrna1
Chr1	gffcl	locus	57977624	57980726	.	+	.	ID=RLOC_00008212;geneIDs=comp143985_c0_seq1.path1,comp161713_c0_seq1.path1;transcripts=comp161713_c0_seq1.mrna1,comp143985_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57977624	57979055	.	+	.	ID=comp161713_c0_seq1.mrna1;geneID=comp161713_c0_seq1.path1;Name=comp161713_c0_seq1;Dir=antisensecoverage=98.9;identity=90.3;matches=1182;mismatches=47;indels=80;unknowns=0;locus=RLOC_00008212
Chr1	stalkie_big_nohaplotig	exon	57977624	57977784	95	+	.	Parent=comp161713_c0_seq1.mrna1;Target=comp161713_c0_seq1 1139 1298 -
Chr1	stalkie_big_nohaplotig	exon	57977846	57978553	85	+	.	Parent=comp161713_c0_seq1.mrna1;Target=comp161713_c0_seq1 372 1138 -
Chr1	stalkie_big_nohaplotig	exon	57978685	57979055	98	+	.	Parent=comp161713_c0_seq1.mrna1;Target=comp161713_c0_seq1 1 371 -
Chr1	stalkie_big_nohaplotig	CDS	57977770	57977784	.	+	0	Parent=comp161713_c0_seq1.mrna1;Target=comp161713_c0_seq1 1139 1153 .
Chr1	stalkie_big_nohaplotig	CDS	57977846	57978079	.	+	0	Parent=comp161713_c0_seq1.mrna1;Target=comp161713_c0_seq1 905 1138 .
Chr1	stalkie_big_nohaplotig	mRNA	57978074	57980726	.	+	.	ID=comp143985_c0_seq1.mrna1;geneID=comp143985_c0_seq1.path1;Name=comp143985_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=609;mismatches=1;indels=1;unknowns=0;locus=RLOC_00008212
Chr1	stalkie_big_nohaplotig	exon	57978074	57978097	100	+	.	Parent=comp143985_c0_seq1.mrna1;Target=comp143985_c0_seq1 1 24 +
Chr1	stalkie_big_nohaplotig	exon	57980140	57980726	99	+	.	Parent=comp143985_c0_seq1.mrna1;Target=comp143985_c0_seq1 25 610 +
Chr1	stalkie_big_nohaplotig	CDS	57978089	57978097	.	+	0	Parent=comp143985_c0_seq1.mrna1;Target=comp143985_c0_seq1 16 24 +
Chr1	stalkie_big_nohaplotig	CDS	57980140	57980244	.	+	0	Parent=comp143985_c0_seq1.mrna1;Target=comp143985_c0_seq1 25 129 +
Chr1	gffcl	locus	57981345	57982194	.	-	.	ID=RLOC_00008213;geneIDs=comp135077_c0_seq1.path1;transcripts=comp135077_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57981345	57982194	.	-	.	ID=comp135077_c0_seq1.mrna1;geneID=comp135077_c0_seq1.path1;Name=comp135077_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.5;matches=846;mismatches=4;indels=0;unknowns=0;Target=comp135077_c0_seq1 858 9 .;CDS_Target=comp135077_c0_seq1 724 137 .;locus=RLOC_00008213
Chr1	stalkie_big_nohaplotig	exon	57981345	57982194	99	-	.	Parent=comp135077_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	57981479	57982066	.	-	0	Parent=comp135077_c0_seq1.mrna1
Chr1	gffcl	locus	57982277	57983681	.	-	.	ID=RLOC_00008214;geneIDs=comp152932_c0_seq1.path1;transcripts=comp152932_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	57982277	57983681	.	-	.	ID=comp152932_c0_seq1.mrna1;geneID=comp152932_c0_seq1.path1;Name=comp152932_c0_seq1;Dir=antisensecoverage=100.0;identity=95.8;matches=531;mismatches=6;indels=17;unknowns=0;locus=RLOC_00008214
Chr1	stalkie_big_nohaplotig	exon	57982277	57982697	94	-	.	Parent=comp152932_c0_seq1.mrna1;Target=comp152932_c0_seq1 1 438 -
Chr1	stalkie_big_nohaplotig	exon	57983566	57983681	99	-	.	Parent=comp152932_c0_seq1.mrna1;Target=comp152932_c0_seq1 439 554 -
Chr1	stalkie_big_nohaplotig	CDS	57982681	57982697	.	-	2	Parent=comp152932_c0_seq1.mrna1;Target=comp152932_c0_seq1 422 438 .
Chr1	stalkie_big_nohaplotig	CDS	57983566	57983671	.	-	0	Parent=comp152932_c0_seq1.mrna1;Target=comp152932_c0_seq1 439 544 .
Chr1	gffcl	locus	58064140	58066237	.	+	.	ID=RLOC_00008215;geneIDs=comp160353_c4_seq1.path1;transcripts=comp160353_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58064140	58066237	.	+	.	ID=comp160353_c4_seq1.mrna1;geneID=comp160353_c4_seq1.path1;Name=comp160353_c4_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=1650;mismatches=8;indels=2;unknowns=0;Target=comp160353_c4_seq1 415 831 +;locus=RLOC_00008215
Chr1	stalkie_big_nohaplotig	exon	58064140	58064454	100	+	.	Parent=comp160353_c4_seq1.mrna1;Target=comp160353_c4_seq1 1 315 +
Chr1	stalkie_big_nohaplotig	exon	58064547	58064617	100	+	.	Parent=comp160353_c4_seq1.mrna1;Target=comp160353_c4_seq1 316 386 +
Chr1	stalkie_big_nohaplotig	exon	58064727	58065480	100	+	.	Parent=comp160353_c4_seq1.mrna1;Target=comp160353_c4_seq1 387 1140 +
Chr1	stalkie_big_nohaplotig	exon	58065533	58065927	97	+	.	Parent=comp160353_c4_seq1.mrna1;Target=comp160353_c4_seq1 1141 1537 +
Chr1	stalkie_big_nohaplotig	exon	58066115	58066237	100	+	.	Parent=comp160353_c4_seq1.mrna1;Target=comp160353_c4_seq1 1538 1660 +
Chr1	stalkie_big_nohaplotig	CDS	58064755	58065171	.	+	0	Parent=comp160353_c4_seq1.mrna1
Chr1	gffcl	locus	58104912	58107827	.	+	.	ID=RLOC_00008216;geneIDs=FBgn0038597.1.path1;transcripts=FBgn0038597.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58104912	58107827	.	+	.	ID=FBgn0038597.1.mrna1;geneID=FBgn0038597.1.path1;Name=FBgn0038597.1;Dir=sensecoverage=100.0;identity=99.7;matches=2792;mismatches=7;indels=0;unknowns=0;locus=RLOC_00008216
Chr1	stalkie_big_nohaplotig	exon	58104912	58105117	100	+	.	Parent=FBgn0038597.1.mrna1;Target=FBgn0038597.1 1 206 +
Chr1	stalkie_big_nohaplotig	exon	58105175	58106991	99	+	.	Parent=FBgn0038597.1.mrna1;Target=FBgn0038597.1 207 2023 +
Chr1	stalkie_big_nohaplotig	exon	58107052	58107827	99	+	.	Parent=FBgn0038597.1.mrna1;Target=FBgn0038597.1 2024 2799 +
Chr1	stalkie_big_nohaplotig	CDS	58104912	58105117	.	+	0	Parent=FBgn0038597.1.mrna1;Target=FBgn0038597.1 1 206 +
Chr1	stalkie_big_nohaplotig	CDS	58105175	58106991	.	+	1	Parent=FBgn0038597.1.mrna1;Target=FBgn0038597.1 207 2023 +
Chr1	stalkie_big_nohaplotig	CDS	58107052	58107827	.	+	2	Parent=FBgn0038597.1.mrna1;Target=FBgn0038597.1 2024 2799 +
Chr1	gffcl	locus	58152564	58153538	.	+	.	ID=RLOC_00008217;geneIDs=FBgn0032949.2.path1;transcripts=FBgn0032949.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58152564	58153538	.	+	.	ID=FBgn0032949.2.mrna1;geneID=FBgn0032949.2.path1;Name=FBgn0032949.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=975;mismatches=0;indels=0;unknowns=0;Target=FBgn0032949.2 975 1 .;locus=RLOC_00008217
Chr1	stalkie_big_nohaplotig	exon	58152564	58153538	100	+	.	Parent=FBgn0032949.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	58152564	58153538	.	+	0	Parent=FBgn0032949.2.mrna1
Chr1	gffcl	locus	58164362	58165539	.	-	.	ID=RLOC_00008218;geneIDs=ORF2483.path1,comp153071_c0_seq1.path1;transcripts=comp153071_c0_seq1.mrna1,ORF2483.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58164362	58165539	.	-	.	ID=comp153071_c0_seq1.mrna1;geneID=comp153071_c0_seq1.path1;Name=comp153071_c0_seq1;Dir=sensecoverage=96.9;identity=99.7;matches=1112;mismatches=3;indels=0;unknowns=0;Target=comp153071_c0_seq1 151 687 +;locus=RLOC_00008218
Chr1	stalkie_big_nohaplotig	exon	58164362	58164605	99	-	.	Parent=comp153071_c0_seq1.mrna1;Target=comp153071_c0_seq1 908 1151 +
Chr1	stalkie_big_nohaplotig	exon	58164669	58165539	99	-	.	Parent=comp153071_c0_seq1.mrna1;Target=comp153071_c0_seq1 37 907 +
Chr1	stalkie_big_nohaplotig	CDS	58164889	58165425	.	-	0	Parent=comp153071_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58164476	58165488	.	-	.	ID=ORF2483.mrna1;geneID=ORF2483.path1;Name=ORF2483;Dir=sensecoverage=100.0;identity=99.8;matches=850;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008218
Chr1	stalkie_big_nohaplotig	exon	58164476	58164605	99	-	.	Parent=ORF2483.mrna1;Target=ORF2483 723 852 +
Chr1	stalkie_big_nohaplotig	exon	58164669	58164791	100	-	.	Parent=ORF2483.mrna1;Target=ORF2483 600 722 +
Chr1	stalkie_big_nohaplotig	exon	58164890	58165488	99	-	.	Parent=ORF2483.mrna1;Target=ORF2483 1 599 +
Chr1	stalkie_big_nohaplotig	CDS	58164476	58164605	.	-	1	Parent=ORF2483.mrna1;Target=ORF2483 723 852 +
Chr1	stalkie_big_nohaplotig	CDS	58164669	58164791	.	-	1	Parent=ORF2483.mrna1;Target=ORF2483 600 722 +
Chr1	stalkie_big_nohaplotig	CDS	58164890	58165488	.	-	0	Parent=ORF2483.mrna1;Target=ORF2483 1 599 +
Chr1	gffcl	locus	58170611	58171569	.	-	.	ID=RLOC_00008219;geneIDs=comp142464_c0_seq1.path1;transcripts=comp142464_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58170611	58171569	.	-	.	ID=comp142464_c0_seq1.mrna1;geneID=comp142464_c0_seq1.path1;Name=comp142464_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.8;matches=957;mismatches=2;indels=0;unknowns=0;Target=comp142464_c0_seq1 959 1 .;CDS_Target=comp142464_c0_seq1 643 2 .;locus=RLOC_00008219
Chr1	stalkie_big_nohaplotig	exon	58170611	58171569	99	-	.	Parent=comp142464_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	58170927	58171568	.	-	0	Parent=comp142464_c0_seq1.mrna1
Chr1	gffcl	locus	58175552	58176225	.	-	.	ID=RLOC_00008220;geneIDs=comp95816_c0_seq1.path1;transcripts=comp95816_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58175552	58176225	.	-	.	ID=comp95816_c0_seq1.mrna1;geneID=comp95816_c0_seq1.path1;Name=comp95816_c0_seq1;Dir=indeterminatecoverage=97.4;identity=99.9;matches=673;mismatches=1;indels=0;unknowns=0;Target=comp95816_c0_seq1 691 18 .;CDS_Target=comp95816_c0_seq1 658 68 .;locus=RLOC_00008220
Chr1	stalkie_big_nohaplotig	exon	58175552	58176225	99	-	.	Parent=comp95816_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	58175585	58176175	.	-	0	Parent=comp95816_c0_seq1.mrna1
Chr1	gffcl	locus	58176968	58177488	.	-	.	ID=RLOC_00008221;geneIDs=comp116793_c0_seq1.path1;transcripts=comp116793_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58176968	58177488	.	-	.	ID=comp116793_c0_seq1.mrna1;geneID=comp116793_c0_seq1.path1;Name=comp116793_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=520;mismatches=1;indels=0;unknowns=0;Target=comp116793_c0_seq1 521 1 .;CDS_Target=comp116793_c0_seq1 521 57 .;locus=RLOC_00008221
Chr1	stalkie_big_nohaplotig	exon	58176968	58177488	99	-	.	Parent=comp116793_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	58176968	58177432	.	-	0	Parent=comp116793_c0_seq1.mrna1
Chr1	gffcl	locus	58179401	58180226	.	+	.	ID=RLOC_00008222;geneIDs=comp118611_c0_seq1.path1;transcripts=comp118611_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58179401	58180226	.	+	.	ID=comp118611_c0_seq1.mrna1;geneID=comp118611_c0_seq1.path1;Name=comp118611_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=825;mismatches=1;indels=0;unknowns=0;Target=comp118611_c0_seq1 826 1 .;CDS_Target=comp118611_c0_seq1 452 342 .;locus=RLOC_00008222
Chr1	stalkie_big_nohaplotig	exon	58179401	58180226	99	+	.	Parent=comp118611_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	58179742	58179852	.	+	0	Parent=comp118611_c0_seq1.mrna1
Chr1	gffcl	locus	58186183	58186999	.	-	.	ID=RLOC_00008223;geneIDs=comp242320_c0_seq1.path1;transcripts=comp242320_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58186183	58186999	.	-	.	ID=comp242320_c0_seq1.mrna1;geneID=comp242320_c0_seq1.path1;Name=comp242320_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=815;mismatches=2;indels=0;unknowns=0;Target=comp242320_c0_seq1 817 1 .;CDS_Target=comp242320_c0_seq1 650 51 .;locus=RLOC_00008223
Chr1	stalkie_big_nohaplotig	exon	58186183	58186999	99	-	.	Parent=comp242320_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	58186350	58186949	.	-	0	Parent=comp242320_c0_seq1.mrna1
Chr1	gffcl	locus	58199263	58201135	.	+	.	ID=RLOC_00008224;geneIDs=comp157664_c0_seq1.path1;transcripts=comp157664_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58199263	58201135	.	+	.	ID=comp157664_c0_seq1.mrna1;geneID=comp157664_c0_seq1.path1;Name=comp157664_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.4;matches=1862;mismatches=10;indels=1;unknowns=0;Target=comp157664_c0_seq1 1886 15 .;CDS_Target=comp157664_c0_seq1 1244 1050 .;locus=RLOC_00008224
Chr1	stalkie_big_nohaplotig	exon	58199263	58201135	99	+	.	Parent=comp157664_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	58200298	58200492	.	+	0	Parent=comp157664_c0_seq1.mrna1
Chr1	gffcl	locus	58202740	58203287	.	-	.	ID=RLOC_00008225;geneIDs=FBgn0032003.1.path1;transcripts=FBgn0032003.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58202740	58203287	.	-	.	ID=FBgn0032003.1.mrna1;geneID=FBgn0032003.1.path1;Name=FBgn0032003.1;Dir=sensecoverage=100.0;identity=100.0;matches=492;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008225
Chr1	stalkie_big_nohaplotig	exon	58202740	58203155	100	-	.	Parent=FBgn0032003.1.mrna1;Target=FBgn0032003.1 77 492 +
Chr1	stalkie_big_nohaplotig	exon	58203212	58203287	100	-	.	Parent=FBgn0032003.1.mrna1;Target=FBgn0032003.1 1 76 +
Chr1	stalkie_big_nohaplotig	CDS	58202740	58203155	.	-	2	Parent=FBgn0032003.1.mrna1;Target=FBgn0032003.1 77 492 +
Chr1	stalkie_big_nohaplotig	CDS	58203212	58203287	.	-	0	Parent=FBgn0032003.1.mrna1;Target=FBgn0032003.1 1 76 +
Chr1	gffcl	locus	58210161	58217529	.	-	.	ID=RLOC_00008226;geneIDs=FBgn0036323.1.path1;transcripts=FBgn0036323.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58210161	58217529	.	-	.	ID=FBgn0036323.1.mrna1;geneID=FBgn0036323.1.path1;Name=FBgn0036323.1;Dir=sensecoverage=100.0;identity=99.6;matches=1359;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008226
Chr1	stalkie_big_nohaplotig	exon	58210161	58211356	99	-	.	Parent=FBgn0036323.1.mrna1;Target=FBgn0036323.1 170 1365 +
Chr1	stalkie_big_nohaplotig	exon	58217361	58217529	98	-	.	Parent=FBgn0036323.1.mrna1;Target=FBgn0036323.1 1 169 +
Chr1	stalkie_big_nohaplotig	CDS	58210161	58211356	.	-	2	Parent=FBgn0036323.1.mrna1;Target=FBgn0036323.1 170 1365 +
Chr1	stalkie_big_nohaplotig	CDS	58217361	58217529	.	-	0	Parent=FBgn0036323.1.mrna1;Target=FBgn0036323.1 1 169 +
Chr1	gffcl	locus	58221040	58222407	.	+	.	ID=RLOC_00008227;geneIDs=FBgn0036321.path1;transcripts=FBgn0036321.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58221040	58222407	.	+	.	ID=FBgn0036321.mrna1;geneID=FBgn0036321.path1;Name=FBgn0036321;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1360;mismatches=8;indels=0;unknowns=0;Target=FBgn0036321 1368 1 .;locus=RLOC_00008227
Chr1	stalkie_big_nohaplotig	exon	58221040	58222407	99	+	.	Parent=FBgn0036321.mrna1
Chr1	stalkie_big_nohaplotig	CDS	58221040	58222407	.	+	0	Parent=FBgn0036321.mrna1
Chr1	gffcl	locus	58231730	58232876	.	+	.	ID=RLOC_00008228;geneIDs=FBgn0036330.1.path1;transcripts=FBgn0036330.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58231730	58232876	.	+	.	ID=FBgn0036330.1.mrna1;geneID=FBgn0036330.1.path1;Name=FBgn0036330.1;Dir=sensecoverage=100.0;identity=99.9;matches=1085;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008228
Chr1	stalkie_big_nohaplotig	exon	58231730	58232539	100	+	.	Parent=FBgn0036330.1.mrna1;Target=FBgn0036330.1 1 810 +
Chr1	stalkie_big_nohaplotig	exon	58232601	58232876	99	+	.	Parent=FBgn0036330.1.mrna1;Target=FBgn0036330.1 811 1086 +
Chr1	stalkie_big_nohaplotig	CDS	58231730	58232539	.	+	0	Parent=FBgn0036330.1.mrna1;Target=FBgn0036330.1 1 810 +
Chr1	stalkie_big_nohaplotig	CDS	58232601	58232876	.	+	0	Parent=FBgn0036330.1.mrna1;Target=FBgn0036330.1 811 1086 +
Chr1	gffcl	locus	58233310	58233681	.	-	.	ID=RLOC_00008229;geneIDs=comp149346_c0_seq1.path1;transcripts=comp149346_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58233310	58233681	.	-	.	ID=comp149346_c0_seq1.mrna1;geneID=comp149346_c0_seq1.path1;Name=comp149346_c0_seq1;Dir=indeterminatecoverage=99.5;identity=94.3;matches=363;mismatches=9;indels=13;unknowns=0;Target=comp149346_c0_seq1 387 3 .;CDS_Target=comp149346_c0_seq1 302 195 .;locus=RLOC_00008229
Chr1	stalkie_big_nohaplotig	exon	58233310	58233681	94	-	.	Parent=comp149346_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	58233395	58233489	.	-	0	Parent=comp149346_c0_seq1.mrna1
Chr1	gffcl	locus	58236757	58238011	.	+	.	ID=RLOC_00008230;geneIDs=comp151157_c0_seq1.path1;transcripts=comp151157_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58236757	58238011	.	+	.	ID=comp151157_c0_seq1.mrna1;geneID=comp151157_c0_seq1.path1;Name=comp151157_c0_seq1;Dir=sensecoverage=98.5;identity=99.7;matches=976;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008230
Chr1	stalkie_big_nohaplotig	exon	58236757	58236881	99	+	.	Parent=comp151157_c0_seq1.mrna1;Target=comp151157_c0_seq1 1 125 +
Chr1	stalkie_big_nohaplotig	exon	58237041	58237227	99	+	.	Parent=comp151157_c0_seq1.mrna1;Target=comp151157_c0_seq1 126 312 +
Chr1	stalkie_big_nohaplotig	exon	58237292	58237500	99	+	.	Parent=comp151157_c0_seq1.mrna1;Target=comp151157_c0_seq1 313 521 +
Chr1	stalkie_big_nohaplotig	exon	58237554	58238011	100	+	.	Parent=comp151157_c0_seq1.mrna1;Target=comp151157_c0_seq1 522 979 +
Chr1	stalkie_big_nohaplotig	CDS	58237087	58237227	.	+	0	Parent=comp151157_c0_seq1.mrna1;Target=comp151157_c0_seq1 172 312 +
Chr1	stalkie_big_nohaplotig	CDS	58237292	58237500	.	+	0	Parent=comp151157_c0_seq1.mrna1;Target=comp151157_c0_seq1 313 521 +
Chr1	stalkie_big_nohaplotig	CDS	58237554	58237671	.	+	1	Parent=comp151157_c0_seq1.mrna1;Target=comp151157_c0_seq1 522 639 +
Chr1	gffcl	locus	58239100	58241983	.	-	.	ID=RLOC_00008231;geneIDs=FBgn0028695.1.path1;transcripts=FBgn0028695.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58239100	58241983	.	-	.	ID=FBgn0028695.1.mrna1;geneID=FBgn0028695.1.path1;Name=FBgn0028695.1;Dir=sensecoverage=100.0;identity=99.9;matches=2770;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008231
Chr1	stalkie_big_nohaplotig	exon	58239100	58239945	100	-	.	Parent=FBgn0028695.1.mrna1;Target=FBgn0028695.1 1927 2772 +
Chr1	stalkie_big_nohaplotig	exon	58240000	58240845	100	-	.	Parent=FBgn0028695.1.mrna1;Target=FBgn0028695.1 1081 1926 +
Chr1	stalkie_big_nohaplotig	exon	58240904	58241983	99	-	.	Parent=FBgn0028695.1.mrna1;Target=FBgn0028695.1 1 1080 +
Chr1	stalkie_big_nohaplotig	CDS	58239100	58239945	.	-	0	Parent=FBgn0028695.1.mrna1;Target=FBgn0028695.1 1927 2772 +
Chr1	stalkie_big_nohaplotig	CDS	58240000	58240845	.	-	0	Parent=FBgn0028695.1.mrna1;Target=FBgn0028695.1 1081 1926 +
Chr1	stalkie_big_nohaplotig	CDS	58240904	58241983	.	-	0	Parent=FBgn0028695.1.mrna1;Target=FBgn0028695.1 1 1080 +
Chr1	gffcl	locus	58244461	58245538	.	+	.	ID=RLOC_00008232;geneIDs=FBgn0036916.1.path1;transcripts=FBgn0036916.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58244461	58245538	.	+	.	ID=FBgn0036916.1.mrna1;geneID=FBgn0036916.1.path1;Name=FBgn0036916.1;Dir=sensecoverage=100.0;identity=100.0;matches=831;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008232
Chr1	stalkie_big_nohaplotig	exon	58244461	58244614	100	+	.	Parent=FBgn0036916.1.mrna1;Target=FBgn0036916.1 1 154 +
Chr1	stalkie_big_nohaplotig	exon	58244669	58244786	100	+	.	Parent=FBgn0036916.1.mrna1;Target=FBgn0036916.1 155 272 +
Chr1	stalkie_big_nohaplotig	exon	58244873	58245026	100	+	.	Parent=FBgn0036916.1.mrna1;Target=FBgn0036916.1 273 426 +
Chr1	stalkie_big_nohaplotig	exon	58245078	58245240	100	+	.	Parent=FBgn0036916.1.mrna1;Target=FBgn0036916.1 427 589 +
Chr1	stalkie_big_nohaplotig	exon	58245297	58245538	100	+	.	Parent=FBgn0036916.1.mrna1;Target=FBgn0036916.1 590 831 +
Chr1	stalkie_big_nohaplotig	CDS	58244461	58244614	.	+	0	Parent=FBgn0036916.1.mrna1;Target=FBgn0036916.1 1 154 +
Chr1	stalkie_big_nohaplotig	CDS	58244669	58244786	.	+	2	Parent=FBgn0036916.1.mrna1;Target=FBgn0036916.1 155 272 +
Chr1	stalkie_big_nohaplotig	CDS	58244873	58245026	.	+	1	Parent=FBgn0036916.1.mrna1;Target=FBgn0036916.1 273 426 +
Chr1	stalkie_big_nohaplotig	CDS	58245078	58245240	.	+	0	Parent=FBgn0036916.1.mrna1;Target=FBgn0036916.1 427 589 +
Chr1	stalkie_big_nohaplotig	CDS	58245297	58245538	.	+	2	Parent=FBgn0036916.1.mrna1;Target=FBgn0036916.1 590 831 +
Chr1	gffcl	locus	58245659	58247665	.	-	.	ID=RLOC_00008233;geneIDs=FBgn0036915.1.path1;transcripts=FBgn0036915.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58245659	58247665	.	-	.	ID=FBgn0036915.1.mrna1;geneID=FBgn0036915.1.path1;Name=FBgn0036915.1;Dir=sensecoverage=100.0;identity=99.6;matches=1946;mismatches=7;indels=0;unknowns=0;locus=RLOC_00008233
Chr1	stalkie_big_nohaplotig	exon	58245659	58246407	99	-	.	Parent=FBgn0036915.1.mrna1;Target=FBgn0036915.1 1205 1953 +
Chr1	stalkie_big_nohaplotig	exon	58246462	58247665	99	-	.	Parent=FBgn0036915.1.mrna1;Target=FBgn0036915.1 1 1204 +
Chr1	stalkie_big_nohaplotig	CDS	58245659	58246407	.	-	2	Parent=FBgn0036915.1.mrna1;Target=FBgn0036915.1 1205 1953 +
Chr1	stalkie_big_nohaplotig	CDS	58246462	58247665	.	-	0	Parent=FBgn0036915.1.mrna1;Target=FBgn0036915.1 1 1204 +
Chr1	gffcl	locus	58271895	58273114	.	-	.	ID=RLOC_00008234;geneIDs=comp157415_c0_seq1.path1;transcripts=comp157415_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58271895	58273114	.	-	.	ID=comp157415_c0_seq1.mrna1;geneID=comp157415_c0_seq1.path1;Name=comp157415_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1212;mismatches=8;indels=3;unknowns=0;Target=comp157415_c0_seq1 1223 1 .;CDS_Target=comp157415_c0_seq1 603 514 .;locus=RLOC_00008234
Chr1	stalkie_big_nohaplotig	exon	58271895	58273114	99	-	.	Parent=comp157415_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	58272512	58272601	.	-	0	Parent=comp157415_c0_seq1.mrna1
Chr1	gffcl	locus	58273286	58274058	.	+	.	ID=RLOC_00008235;geneIDs=comp155357_c0_seq1.path1;transcripts=comp155357_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58273286	58274058	.	+	.	ID=comp155357_c0_seq1.mrna1;geneID=comp155357_c0_seq1.path1;Name=comp155357_c0_seq1;Dir=indeterminatecoverage=93.8;identity=98.0;matches=769;mismatches=4;indels=12;unknowns=0;Target=comp155357_c0_seq1 785 1 .;CDS_Target=comp155357_c0_seq1 603 502 .;locus=RLOC_00008235
Chr1	stalkie_big_nohaplotig	exon	58273286	58274058	97	+	.	Parent=comp155357_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	58273787	58273877	.	+	0	Parent=comp155357_c0_seq1.mrna1
Chr1	gffcl	locus	58274094	59017944	.	+	.	ID=RLOC_00008236;geneIDs=FBgn0035619.1.path1,comp153530_c0_seq1.path1;transcripts=comp153530_c0_seq1.mrna1,FBgn0035619.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58274094	59017944	.	+	.	ID=comp153530_c0_seq1.mrna1;geneID=comp153530_c0_seq1.path1;Name=comp153530_c0_seq1;Dir=indeterminatecoverage=80.0;identity=100.0;matches=799;mismatches=0;indels=0;unknowns=0;Target=comp153530_c0_seq1 212 84 .;locus=RLOC_00008236
Chr1	stalkie_big_nohaplotig	exon	58274094	58274838	100	+	.	Parent=comp153530_c0_seq1.mrna1;Target=comp153530_c0_seq1 827 83 .
Chr1	stalkie_big_nohaplotig	exon	58991748	58991756	100	+	.	Parent=comp153530_c0_seq1.mrna1;Target=comp153530_c0_seq1 836 828 .
Chr1	stalkie_big_nohaplotig	exon	58994492	58994495	100	+	.	Parent=comp153530_c0_seq1.mrna1;Target=comp153530_c0_seq1 845 842 .
Chr1	stalkie_big_nohaplotig	exon	59003369	59003376	100	+	.	Parent=comp153530_c0_seq1.mrna1;Target=comp153530_c0_seq1 853 846 .
Chr1	stalkie_big_nohaplotig	exon	59004473	59004476	100	+	.	Parent=comp153530_c0_seq1.mrna1;Target=comp153530_c0_seq1 857 854 .
Chr1	stalkie_big_nohaplotig	exon	59010728	59010736	100	+	.	Parent=comp153530_c0_seq1.mrna1;Target=comp153530_c0_seq1 866 858 .
Chr1	stalkie_big_nohaplotig	exon	59010952	59010961	100	+	.	Parent=comp153530_c0_seq1.mrna1;Target=comp153530_c0_seq1 876 867 .
Chr1	stalkie_big_nohaplotig	exon	59017935	59017944	100	+	.	Parent=comp153530_c0_seq1.mrna1;Target=comp153530_c0_seq1 886 877 .
Chr1	stalkie_big_nohaplotig	CDS	58274095	58274223	.	+	0	Parent=comp153530_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59010577	59012484	.	+	.	ID=FBgn0035619.1.mrna1;geneID=FBgn0035619.1.path1;Name=FBgn0035619.1;Dir=sensecoverage=100.0;identity=99.4;matches=1580;mismatches=10;indels=0;unknowns=0;locus=RLOC_00008236
Chr1	stalkie_big_nohaplotig	exon	59010577	59010673	97	+	.	Parent=FBgn0035619.1.mrna1;Target=FBgn0035619.1 1 97 +
Chr1	stalkie_big_nohaplotig	exon	59010814	59011967	99	+	.	Parent=FBgn0035619.1.mrna1;Target=FBgn0035619.1 98 1251 +
Chr1	stalkie_big_nohaplotig	exon	59012146	59012484	99	+	.	Parent=FBgn0035619.1.mrna1;Target=FBgn0035619.1 1252 1590 +
Chr1	stalkie_big_nohaplotig	CDS	59010577	59010673	.	+	0	Parent=FBgn0035619.1.mrna1;Target=FBgn0035619.1 1 97 +
Chr1	stalkie_big_nohaplotig	CDS	59010814	59011967	.	+	2	Parent=FBgn0035619.1.mrna1;Target=FBgn0035619.1 98 1251 +
Chr1	stalkie_big_nohaplotig	CDS	59012146	59012484	.	+	0	Parent=FBgn0035619.1.mrna1;Target=FBgn0035619.1 1252 1590 +
Chr1	gffcl	locus	58276357	58282544	.	+	.	ID=RLOC_00008237;geneIDs=FBgn0262519.1.path1;transcripts=FBgn0262519.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58276357	58282544	.	+	.	ID=FBgn0262519.1.mrna1;geneID=FBgn0262519.1.path1;Name=FBgn0262519.1;Dir=sensecoverage=99.0;identity=99.9;matches=5918;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008237
Chr1	stalkie_big_nohaplotig	exon	58276357	58276436	100	+	.	Parent=FBgn0262519.1.mrna1;Target=FBgn0262519.1 59 138 +
Chr1	stalkie_big_nohaplotig	exon	58276499	58276763	100	+	.	Parent=FBgn0262519.1.mrna1;Target=FBgn0262519.1 139 403 +
Chr1	stalkie_big_nohaplotig	exon	58276845	58277149	100	+	.	Parent=FBgn0262519.1.mrna1;Target=FBgn0262519.1 404 708 +
Chr1	stalkie_big_nohaplotig	exon	58277214	58282335	99	+	.	Parent=FBgn0262519.1.mrna1;Target=FBgn0262519.1 709 5830 +
Chr1	stalkie_big_nohaplotig	exon	58282393	58282544	100	+	.	Parent=FBgn0262519.1.mrna1;Target=FBgn0262519.1 5831 5982 +
Chr1	stalkie_big_nohaplotig	CDS	58276359	58276436	.	+	0	Parent=FBgn0262519.1.mrna1;Target=FBgn0262519.1 61 138 +
Chr1	stalkie_big_nohaplotig	CDS	58276499	58276763	.	+	0	Parent=FBgn0262519.1.mrna1;Target=FBgn0262519.1 139 403 +
Chr1	stalkie_big_nohaplotig	CDS	58276845	58277149	.	+	2	Parent=FBgn0262519.1.mrna1;Target=FBgn0262519.1 404 708 +
Chr1	stalkie_big_nohaplotig	CDS	58277214	58282335	.	+	0	Parent=FBgn0262519.1.mrna1;Target=FBgn0262519.1 709 5830 +
Chr1	stalkie_big_nohaplotig	CDS	58282393	58282544	.	+	2	Parent=FBgn0262519.1.mrna1;Target=FBgn0262519.1 5831 5982 +
Chr1	gffcl	locus	58284786	58286819	.	-	.	ID=RLOC_00008238;geneIDs=FBgn0036337.1.path1;transcripts=FBgn0036337.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58284786	58286819	.	-	.	ID=FBgn0036337.1.mrna1;geneID=FBgn0036337.1.path1;Name=FBgn0036337.1;Dir=sensecoverage=100.0;identity=99.9;matches=1064;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008238
Chr1	stalkie_big_nohaplotig	exon	58284786	58285163	100	-	.	Parent=FBgn0036337.1.mrna1;Target=FBgn0036337.1 688 1065 +
Chr1	stalkie_big_nohaplotig	exon	58285234	58285888	99	-	.	Parent=FBgn0036337.1.mrna1;Target=FBgn0036337.1 33 687 +
Chr1	stalkie_big_nohaplotig	exon	58286788	58286819	100	-	.	Parent=FBgn0036337.1.mrna1;Target=FBgn0036337.1 1 32 +
Chr1	stalkie_big_nohaplotig	CDS	58284786	58285163	.	-	0	Parent=FBgn0036337.1.mrna1;Target=FBgn0036337.1 688 1065 +
Chr1	stalkie_big_nohaplotig	CDS	58285234	58285888	.	-	1	Parent=FBgn0036337.1.mrna1;Target=FBgn0036337.1 33 687 +
Chr1	stalkie_big_nohaplotig	CDS	58286788	58286819	.	-	0	Parent=FBgn0036337.1.mrna1;Target=FBgn0036337.1 1 32 +
Chr1	gffcl	locus	58290791	58291441	.	+	.	ID=RLOC_00008239;geneIDs=FBgn0260441.2.path1;transcripts=FBgn0260441.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58290791	58291441	.	+	.	ID=FBgn0260441.2.mrna1;geneID=FBgn0260441.2.path1;Name=FBgn0260441.2;Dir=sensecoverage=100.0;identity=100.0;matches=420;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008239
Chr1	stalkie_big_nohaplotig	exon	58290791	58290810	100	+	.	Parent=FBgn0260441.2.mrna1;Target=FBgn0260441.2 1 20 +
Chr1	stalkie_big_nohaplotig	exon	58290981	58291115	100	+	.	Parent=FBgn0260441.2.mrna1;Target=FBgn0260441.2 21 155 +
Chr1	stalkie_big_nohaplotig	exon	58291177	58291441	100	+	.	Parent=FBgn0260441.2.mrna1;Target=FBgn0260441.2 156 420 +
Chr1	stalkie_big_nohaplotig	CDS	58290791	58290810	.	+	0	Parent=FBgn0260441.2.mrna1;Target=FBgn0260441.2 1 20 +
Chr1	stalkie_big_nohaplotig	CDS	58290981	58291115	.	+	1	Parent=FBgn0260441.2.mrna1;Target=FBgn0260441.2 21 155 +
Chr1	stalkie_big_nohaplotig	CDS	58291177	58291441	.	+	1	Parent=FBgn0260441.2.mrna1;Target=FBgn0260441.2 156 420 +
Chr1	gffcl	locus	58291668	58293368	.	-	.	ID=RLOC_00008240;geneIDs=FBgn0036338.1.path1;transcripts=FBgn0036338.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58291668	58293368	.	-	.	ID=FBgn0036338.1.mrna1;geneID=FBgn0036338.1.path1;Name=FBgn0036338.1;Dir=sensecoverage=100.0;identity=99.7;matches=1456;mismatches=5;indels=0;unknowns=0;locus=RLOC_00008240
Chr1	stalkie_big_nohaplotig	exon	58291668	58291722	100	-	.	Parent=FBgn0036338.1.mrna1;Target=FBgn0036338.1 1407 1461 +
Chr1	stalkie_big_nohaplotig	exon	58291780	58292240	99	-	.	Parent=FBgn0036338.1.mrna1;Target=FBgn0036338.1 946 1406 +
Chr1	stalkie_big_nohaplotig	exon	58292315	58292466	99	-	.	Parent=FBgn0036338.1.mrna1;Target=FBgn0036338.1 794 945 +
Chr1	stalkie_big_nohaplotig	exon	58292519	58292784	99	-	.	Parent=FBgn0036338.1.mrna1;Target=FBgn0036338.1 528 793 +
Chr1	stalkie_big_nohaplotig	exon	58292842	58293368	99	-	.	Parent=FBgn0036338.1.mrna1;Target=FBgn0036338.1 1 527 +
Chr1	stalkie_big_nohaplotig	CDS	58291668	58291722	.	-	1	Parent=FBgn0036338.1.mrna1;Target=FBgn0036338.1 1407 1461 +
Chr1	stalkie_big_nohaplotig	CDS	58291780	58292240	.	-	0	Parent=FBgn0036338.1.mrna1;Target=FBgn0036338.1 946 1406 +
Chr1	stalkie_big_nohaplotig	CDS	58292315	58292466	.	-	2	Parent=FBgn0036338.1.mrna1;Target=FBgn0036338.1 794 945 +
Chr1	stalkie_big_nohaplotig	CDS	58292519	58292784	.	-	1	Parent=FBgn0036338.1.mrna1;Target=FBgn0036338.1 528 793 +
Chr1	stalkie_big_nohaplotig	CDS	58292842	58293368	.	-	0	Parent=FBgn0036338.1.mrna1;Target=FBgn0036338.1 1 527 +
Chr1	gffcl	locus	58295304	58296746	.	-	.	ID=RLOC_00008241;geneIDs=FBgn0036919.1.path1;transcripts=FBgn0036919.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58295304	58296746	.	-	.	ID=FBgn0036919.1.mrna1;geneID=FBgn0036919.1.path1;Name=FBgn0036919.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1441;mismatches=2;indels=0;unknowns=0;Target=FBgn0036919.1 1443 1 .;locus=RLOC_00008241
Chr1	stalkie_big_nohaplotig	exon	58295304	58296746	99	-	.	Parent=FBgn0036919.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	58295304	58296746	.	-	0	Parent=FBgn0036919.1.mrna1
Chr1	gffcl	locus	58299970	58300488	.	-	.	ID=RLOC_00008242;geneIDs=FBgn0036918.1.path1;transcripts=FBgn0036918.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58299970	58300488	.	-	.	ID=FBgn0036918.1.mrna1;geneID=FBgn0036918.1.path1;Name=FBgn0036918.1;Dir=sensecoverage=100.0;identity=99.8;matches=458;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008242
Chr1	stalkie_big_nohaplotig	exon	58299970	58300271	99	-	.	Parent=FBgn0036918.1.mrna1;Target=FBgn0036918.1 158 459 +
Chr1	stalkie_big_nohaplotig	exon	58300332	58300488	100	-	.	Parent=FBgn0036918.1.mrna1;Target=FBgn0036918.1 1 157 +
Chr1	stalkie_big_nohaplotig	CDS	58299970	58300271	.	-	2	Parent=FBgn0036918.1.mrna1;Target=FBgn0036918.1 158 459 +
Chr1	stalkie_big_nohaplotig	CDS	58300332	58300488	.	-	0	Parent=FBgn0036918.1.mrna1;Target=FBgn0036918.1 1 157 +
Chr1	gffcl	locus	58303359	58312485	.	+	.	ID=RLOC_00008243;geneIDs=FBgn0020887.1.path1;transcripts=FBgn0020887.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58303359	58312485	.	+	.	ID=FBgn0020887.1.mrna1;geneID=FBgn0020887.1.path1;Name=FBgn0020887.1;Dir=sensecoverage=100.0;identity=99.7;matches=2718;mismatches=9;indels=0;unknowns=0;locus=RLOC_00008243
Chr1	stalkie_big_nohaplotig	exon	58303359	58303554	99	+	.	Parent=FBgn0020887.1.mrna1;Target=FBgn0020887.1 1 196 +
Chr1	stalkie_big_nohaplotig	exon	58303607	58303653	100	+	.	Parent=FBgn0020887.1.mrna1;Target=FBgn0020887.1 197 243 +
Chr1	stalkie_big_nohaplotig	exon	58303724	58304005	100	+	.	Parent=FBgn0020887.1.mrna1;Target=FBgn0020887.1 244 525 +
Chr1	stalkie_big_nohaplotig	exon	58306143	58306317	100	+	.	Parent=FBgn0020887.1.mrna1;Target=FBgn0020887.1 526 700 +
Chr1	stalkie_big_nohaplotig	exon	58306378	58307230	99	+	.	Parent=FBgn0020887.1.mrna1;Target=FBgn0020887.1 701 1553 +
Chr1	stalkie_big_nohaplotig	exon	58307288	58308117	99	+	.	Parent=FBgn0020887.1.mrna1;Target=FBgn0020887.1 1554 2383 +
Chr1	stalkie_big_nohaplotig	exon	58312142	58312485	100	+	.	Parent=FBgn0020887.1.mrna1;Target=FBgn0020887.1 2384 2727 +
Chr1	stalkie_big_nohaplotig	CDS	58303359	58303554	.	+	0	Parent=FBgn0020887.1.mrna1;Target=FBgn0020887.1 1 196 +
Chr1	stalkie_big_nohaplotig	CDS	58303607	58303653	.	+	2	Parent=FBgn0020887.1.mrna1;Target=FBgn0020887.1 197 243 +
Chr1	stalkie_big_nohaplotig	CDS	58303724	58304005	.	+	0	Parent=FBgn0020887.1.mrna1;Target=FBgn0020887.1 244 525 +
Chr1	stalkie_big_nohaplotig	CDS	58306143	58306317	.	+	0	Parent=FBgn0020887.1.mrna1;Target=FBgn0020887.1 526 700 +
Chr1	stalkie_big_nohaplotig	CDS	58306378	58307230	.	+	2	Parent=FBgn0020887.1.mrna1;Target=FBgn0020887.1 701 1553 +
Chr1	stalkie_big_nohaplotig	CDS	58307288	58308117	.	+	1	Parent=FBgn0020887.1.mrna1;Target=FBgn0020887.1 1554 2383 +
Chr1	stalkie_big_nohaplotig	CDS	58312142	58312485	.	+	2	Parent=FBgn0020887.1.mrna1;Target=FBgn0020887.1 2384 2727 +
Chr1	gffcl	locus	58312746	58320035	.	-	.	ID=RLOC_00008244;geneIDs=comp147652_c0_seq1.path1;transcripts=comp147652_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58312746	58320035	.	-	.	ID=comp147652_c0_seq1.mrna1;geneID=comp147652_c0_seq1.path1;Name=comp147652_c0_seq1;Dir=indeterminatecoverage=75.3;identity=98.2;matches=218;mismatches=4;indels=0;unknowns=0;locus=RLOC_00008244
Chr1	stalkie_big_nohaplotig	exon	58312746	58312943	97	-	.	Parent=comp147652_c0_seq1.mrna1;Target=comp147652_c0_seq1 295 98 .
Chr1	stalkie_big_nohaplotig	exon	58313519	58313528	100	-	.	Parent=comp147652_c0_seq1.mrna1;Target=comp147652_c0_seq1 97 88 .
Chr1	stalkie_big_nohaplotig	exon	58315223	58315224	100	-	.	Parent=comp147652_c0_seq1.mrna1;Target=comp147652_c0_seq1 87 86 .
Chr1	stalkie_big_nohaplotig	exon	58319663	58319667	100	-	.	Parent=comp147652_c0_seq1.mrna1;Target=comp147652_c0_seq1 85 81 .
Chr1	stalkie_big_nohaplotig	exon	58320029	58320035	100	-	.	Parent=comp147652_c0_seq1.mrna1;Target=comp147652_c0_seq1 80 74 .
Chr1	stalkie_big_nohaplotig	CDS	58312874	58312943	.	-	1	Parent=comp147652_c0_seq1.mrna1;Target=comp147652_c0_seq1 167 98 .
Chr1	stalkie_big_nohaplotig	CDS	58313519	58313528	.	-	2	Parent=comp147652_c0_seq1.mrna1;Target=comp147652_c0_seq1 97 88 .
Chr1	stalkie_big_nohaplotig	CDS	58315223	58315224	.	-	1	Parent=comp147652_c0_seq1.mrna1;Target=comp147652_c0_seq1 87 86 .
Chr1	stalkie_big_nohaplotig	CDS	58319663	58319667	.	-	0	Parent=comp147652_c0_seq1.mrna1;Target=comp147652_c0_seq1 85 81 .
Chr1	stalkie_big_nohaplotig	CDS	58320029	58320034	.	-	0	Parent=comp147652_c0_seq1.mrna1;Target=comp147652_c0_seq1 80 75 .
Chr1	gffcl	locus	58320255	58321147	.	-	.	ID=RLOC_00008245;geneIDs=FBgn0036920.1.path1;transcripts=FBgn0036920.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58320255	58321147	.	-	.	ID=FBgn0036920.1.mrna1;geneID=FBgn0036920.1.path1;Name=FBgn0036920.1;Dir=sensecoverage=99.2;identity=99.9;matches=823;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008245
Chr1	stalkie_big_nohaplotig	exon	58320255	58320959	99	-	.	Parent=FBgn0036920.1.mrna1;Target=FBgn0036920.1 127 831 +
Chr1	stalkie_big_nohaplotig	exon	58321029	58321147	100	-	.	Parent=FBgn0036920.1.mrna1;Target=FBgn0036920.1 8 126 +
Chr1	stalkie_big_nohaplotig	CDS	58320255	58320959	.	-	0	Parent=FBgn0036920.1.mrna1;Target=FBgn0036920.1 127 831 +
Chr1	stalkie_big_nohaplotig	CDS	58321029	58321145	.	-	0	Parent=FBgn0036920.1.mrna1;Target=FBgn0036920.1 10 126 +
Chr1	gffcl	locus	58330569	58333212	.	+	.	ID=RLOC_00008246;geneIDs=FBgn0036921.1.path1,comp122000_c0_seq1.path1;transcripts=FBgn0036921.1.mrna1,comp122000_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58330569	58333212	.	+	.	ID=FBgn0036921.1.mrna1;geneID=FBgn0036921.1.path1;Name=FBgn0036921.1;Dir=sensecoverage=100.0;identity=100.0;matches=606;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008246
Chr1	stalkie_big_nohaplotig	exon	58330569	58330749	100	+	.	Parent=FBgn0036921.1.mrna1;Target=FBgn0036921.1 1 181 +
Chr1	stalkie_big_nohaplotig	exon	58330810	58330919	100	+	.	Parent=FBgn0036921.1.mrna1;Target=FBgn0036921.1 182 291 +
Chr1	stalkie_big_nohaplotig	exon	58332446	58332560	100	+	.	Parent=FBgn0036921.1.mrna1;Target=FBgn0036921.1 292 406 +
Chr1	stalkie_big_nohaplotig	exon	58332925	58332930	100	+	.	Parent=FBgn0036921.1.mrna1;Target=FBgn0036921.1 407 412 +
Chr1	stalkie_big_nohaplotig	exon	58333019	58333212	100	+	.	Parent=FBgn0036921.1.mrna1;Target=FBgn0036921.1 413 606 +
Chr1	stalkie_big_nohaplotig	CDS	58330569	58330749	.	+	0	Parent=FBgn0036921.1.mrna1;Target=FBgn0036921.1 1 181 +
Chr1	stalkie_big_nohaplotig	CDS	58330810	58330919	.	+	2	Parent=FBgn0036921.1.mrna1;Target=FBgn0036921.1 182 291 +
Chr1	stalkie_big_nohaplotig	CDS	58332446	58332560	.	+	0	Parent=FBgn0036921.1.mrna1;Target=FBgn0036921.1 292 406 +
Chr1	stalkie_big_nohaplotig	CDS	58332925	58332930	.	+	2	Parent=FBgn0036921.1.mrna1;Target=FBgn0036921.1 407 412 +
Chr1	stalkie_big_nohaplotig	CDS	58333019	58333212	.	+	2	Parent=FBgn0036921.1.mrna1;Target=FBgn0036921.1 413 606 +
Chr1	stalkie_big_nohaplotig	mRNA	58332836	58333040	.	+	.	ID=comp122000_c0_seq1.mrna1;geneID=comp122000_c0_seq1.path1;Name=comp122000_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=204;mismatches=1;indels=3;unknowns=0;Target=comp122000_c0_seq1 208 1 .;CDS_Target=comp122000_c0_seq1 118 11 .;locus=RLOC_00008246
Chr1	stalkie_big_nohaplotig	exon	58332836	58333040	98	+	.	Parent=comp122000_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	58332846	58332953	.	+	0	Parent=comp122000_c0_seq1.mrna1
Chr1	gffcl	locus	58455313	58455782	.	-	.	ID=RLOC_00008247;geneIDs=comp149869_c0_seq1.path1;transcripts=comp149869_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58455313	58455782	.	-	.	ID=comp149869_c0_seq1.mrna1;geneID=comp149869_c0_seq1.path1;Name=comp149869_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=469;mismatches=1;indels=0;unknowns=0;Target=comp149869_c0_seq1 470 1 .;CDS_Target=comp149869_c0_seq1 376 239 .;locus=RLOC_00008247
Chr1	stalkie_big_nohaplotig	exon	58455313	58455782	99	-	.	Parent=comp149869_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	58455407	58455544	.	-	0	Parent=comp149869_c0_seq1.mrna1
Chr1	gffcl	locus	58455974	58457667	.	-	.	ID=RLOC_00008248;geneIDs=comp163366_c0_seq1.path1;transcripts=comp163366_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58455974	58457667	.	-	.	ID=comp163366_c0_seq1.mrna1;geneID=comp163366_c0_seq1.path1;Name=comp163366_c0_seq1;Dir=indeterminatecoverage=100.0;identity=86.7;matches=1577;mismatches=53;indels=188;unknowns=0;Target=comp163366_c0_seq1 1532 1404 .;locus=RLOC_00008248
Chr1	stalkie_big_nohaplotig	exon	58455974	58457365	86	-	.	Parent=comp163366_c0_seq1.mrna1;Target=comp163366_c0_seq1 1822 270 .
Chr1	stalkie_big_nohaplotig	exon	58457409	58457667	89	-	.	Parent=comp163366_c0_seq1.mrna1;Target=comp163366_c0_seq1 244 1 .
Chr1	stalkie_big_nohaplotig	CDS	58456256	58456384	.	-	0	Parent=comp163366_c0_seq1.mrna1
Chr1	gffcl	locus	58460358	58460950	.	-	.	ID=RLOC_00008249;geneIDs=FBgn0036922.1.path1;transcripts=FBgn0036922.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58460358	58460950	.	-	.	ID=FBgn0036922.1.mrna1;geneID=FBgn0036922.1.path1;Name=FBgn0036922.1;Dir=sensecoverage=100.0;identity=100.0;matches=513;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008249
Chr1	stalkie_big_nohaplotig	exon	58460358	58460755	100	-	.	Parent=FBgn0036922.1.mrna1;Target=FBgn0036922.1 116 513 +
Chr1	stalkie_big_nohaplotig	exon	58460836	58460950	100	-	.	Parent=FBgn0036922.1.mrna1;Target=FBgn0036922.1 1 115 +
Chr1	stalkie_big_nohaplotig	CDS	58460358	58460755	.	-	2	Parent=FBgn0036922.1.mrna1;Target=FBgn0036922.1 116 513 +
Chr1	stalkie_big_nohaplotig	CDS	58460836	58460950	.	-	0	Parent=FBgn0036922.1.mrna1;Target=FBgn0036922.1 1 115 +
Chr1	gffcl	locus	58480098	58480982	.	+	.	ID=RLOC_00008250;geneIDs=Dv_FBgn0206941.2.path5;transcripts=Dv_FBgn0206941.2.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	58480098	58480982	.	+	.	ID=Dv_FBgn0206941.2.mrna5;geneID=Dv_FBgn0206941.2.path5;Name=Dv_FBgn0206941.2;Dir=indeterminatecoverage=100.0;identity=99.8;matches=883;mismatches=2;indels=0;unknowns=0;Target=Dv_FBgn0206941.2 885 1 .;locus=RLOC_00008250
Chr1	stalkie_big_nohaplotig	exon	58480098	58480982	99	+	.	Parent=Dv_FBgn0206941.2.mrna5
Chr1	stalkie_big_nohaplotig	CDS	58480098	58480982	.	+	0	Parent=Dv_FBgn0206941.2.mrna5
Chr1	gffcl	locus	58532048	58534293	.	+	.	ID=RLOC_00008251;geneIDs=ORF253.path1;transcripts=ORF253.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58532048	58534293	.	+	.	ID=ORF253.mrna1;geneID=ORF253.path1;Name=ORF253;Dir=indeterminatecoverage=100.0;identity=99.3;matches=2231;mismatches=15;indels=1;unknowns=0;Target=ORF253 2247 1 .;CDS_Target=ORF253 35 3 .;locus=RLOC_00008251
Chr1	stalkie_big_nohaplotig	exon	58532048	58534293	99	+	.	Parent=ORF253.mrna1
Chr1	stalkie_big_nohaplotig	CDS	58532050	58532081	.	+	0	Parent=ORF253.mrna1
Chr1	gffcl	locus	58546122	58546933	.	+	.	ID=RLOC_00008252;geneIDs=comp156433_c0_seq1.path1;transcripts=comp156433_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58546122	58546933	.	+	.	ID=comp156433_c0_seq1.mrna1;geneID=comp156433_c0_seq1.path1;Name=comp156433_c0_seq1;Dir=indeterminatecoverage=95.0;identity=91.4;matches=713;mismatches=42;indels=25;unknowns=0;Target=comp156433_c0_seq1 294 178 .;locus=RLOC_00008252
Chr1	stalkie_big_nohaplotig	exon	58546122	58546644	88	+	.	Parent=comp156433_c0_seq1.mrna1;Target=comp156433_c0_seq1 548 1 .
Chr1	stalkie_big_nohaplotig	exon	58546702	58546933	97	+	.	Parent=comp156433_c0_seq1.mrna1;Target=comp156433_c0_seq1 780 549 .
Chr1	stalkie_big_nohaplotig	CDS	58546299	58546415	.	+	0	Parent=comp156433_c0_seq1.mrna1
Chr1	gffcl	locus	58548591	58660889	.	+	.	ID=RLOC_00008253;geneIDs=comp159113_c0_seq1.path1,comp161260_c0_seq1.path1;transcripts=comp161260_c0_seq1.mrna1,comp159113_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58548591	58660889	.	+	.	ID=comp161260_c0_seq1.mrna1;geneID=comp161260_c0_seq1.path1;Name=comp161260_c0_seq1;Dir=indeterminatecoverage=96.8;identity=94.2;matches=1009;mismatches=42;indels=20;unknowns=0;Target=comp161260_c0_seq1 663 448 .;locus=RLOC_00008253
Chr1	stalkie_big_nohaplotig	exon	58548591	58548602	100	+	.	Parent=comp161260_c0_seq1.mrna1;Target=comp161260_c0_seq1 53 42 .
Chr1	stalkie_big_nohaplotig	exon	58555599	58555603	100	+	.	Parent=comp161260_c0_seq1.mrna1;Target=comp161260_c0_seq1 58 54 .
Chr1	stalkie_big_nohaplotig	exon	58560790	58560793	50	+	.	Parent=comp161260_c0_seq1.mrna1;Target=comp161260_c0_seq1 62 59 .
Chr1	stalkie_big_nohaplotig	exon	58580539	58580554	68	+	.	Parent=comp161260_c0_seq1.mrna1;Target=comp161260_c0_seq1 73 63 .
Chr1	stalkie_big_nohaplotig	exon	58582796	58582797	100	+	.	Parent=comp161260_c0_seq1.mrna1;Target=comp161260_c0_seq1 205 204 .
Chr1	stalkie_big_nohaplotig	exon	58590209	58590214	100	+	.	Parent=comp161260_c0_seq1.mrna1;Target=comp161260_c0_seq1 211 206 .
Chr1	stalkie_big_nohaplotig	exon	58592183	58592191	100	+	.	Parent=comp161260_c0_seq1.mrna1;Target=comp161260_c0_seq1 220 212 .
Chr1	stalkie_big_nohaplotig	exon	58606243	58606251	100	+	.	Parent=comp161260_c0_seq1.mrna1;Target=comp161260_c0_seq1 236 228 .
Chr1	stalkie_big_nohaplotig	exon	58627818	58627824	100	+	.	Parent=comp161260_c0_seq1.mrna1;Target=comp161260_c0_seq1 279 273 .
Chr1	stalkie_big_nohaplotig	exon	58659905	58660889	94	+	.	Parent=comp161260_c0_seq1.mrna1;Target=comp161260_c0_seq1 1279 280 .
Chr1	stalkie_big_nohaplotig	CDS	58660070	58660280	.	+	0	Parent=comp161260_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58625309	58628799	.	+	.	ID=comp159113_c0_seq1.mrna1;geneID=comp159113_c0_seq1.path1;Name=comp159113_c0_seq1;Dir=indeterminatecoverage=99.2;identity=98.5;matches=2092;mismatches=31;indels=0;unknowns=0;locus=RLOC_00008253
Chr1	stalkie_big_nohaplotig	exon	58625309	58625675	99	+	.	Parent=comp159113_c0_seq1.mrna1;Target=comp159113_c0_seq1 384 18 .
Chr1	stalkie_big_nohaplotig	exon	58625749	58625864	96	+	.	Parent=comp159113_c0_seq1.mrna1;Target=comp159113_c0_seq1 500 385 .
Chr1	stalkie_big_nohaplotig	exon	58626276	58626527	99	+	.	Parent=comp159113_c0_seq1.mrna1;Target=comp159113_c0_seq1 752 501 .
Chr1	stalkie_big_nohaplotig	exon	58627176	58627516	97	+	.	Parent=comp159113_c0_seq1.mrna1;Target=comp159113_c0_seq1 1093 753 .
Chr1	stalkie_big_nohaplotig	exon	58627576	58627761	98	+	.	Parent=comp159113_c0_seq1.mrna1;Target=comp159113_c0_seq1 1279 1094 .
Chr1	stalkie_big_nohaplotig	exon	58627819	58627921	100	+	.	Parent=comp159113_c0_seq1.mrna1;Target=comp159113_c0_seq1 1382 1280 .
Chr1	stalkie_big_nohaplotig	exon	58627978	58628368	99	+	.	Parent=comp159113_c0_seq1.mrna1;Target=comp159113_c0_seq1 1773 1383 .
Chr1	stalkie_big_nohaplotig	exon	58628433	58628799	98	+	.	Parent=comp159113_c0_seq1.mrna1;Target=comp159113_c0_seq1 2140 1774 .
Chr1	stalkie_big_nohaplotig	CDS	58625437	58625675	.	+	0	Parent=comp159113_c0_seq1.mrna1;Target=comp159113_c0_seq1 384 146 .
Chr1	stalkie_big_nohaplotig	CDS	58625749	58625864	.	+	1	Parent=comp159113_c0_seq1.mrna1;Target=comp159113_c0_seq1 500 385 .
Chr1	stalkie_big_nohaplotig	CDS	58626276	58626527	.	+	2	Parent=comp159113_c0_seq1.mrna1;Target=comp159113_c0_seq1 752 501 .
Chr1	stalkie_big_nohaplotig	CDS	58627176	58627240	.	+	2	Parent=comp159113_c0_seq1.mrna1;Target=comp159113_c0_seq1 817 753 .
Chr1	gffcl	locus	58563680	58565652	.	-	.	ID=RLOC_00008254;geneIDs=FBgn0260945.1.path2;transcripts=FBgn0260945.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	58563680	58565652	.	-	.	ID=FBgn0260945.1.mrna2;geneID=FBgn0260945.1.path2;Name=FBgn0260945.1;Dir=sensecoverage=90.4;identity=99.2;matches=1574;mismatches=12;indels=0;unknowns=0;locus=RLOC_00008254
Chr1	stalkie_big_nohaplotig	exon	58563680	58563753	100	-	.	Parent=FBgn0260945.1.mrna2;Target=FBgn0260945.1 1682 1755 +
Chr1	stalkie_big_nohaplotig	exon	58563814	58563949	98	-	.	Parent=FBgn0260945.1.mrna2;Target=FBgn0260945.1 1546 1681 +
Chr1	stalkie_big_nohaplotig	exon	58564010	58564146	100	-	.	Parent=FBgn0260945.1.mrna2;Target=FBgn0260945.1 1409 1545 +
Chr1	stalkie_big_nohaplotig	exon	58564258	58565267	99	-	.	Parent=FBgn0260945.1.mrna2;Target=FBgn0260945.1 399 1408 +
Chr1	stalkie_big_nohaplotig	exon	58565345	58565513	99	-	.	Parent=FBgn0260945.1.mrna2;Target=FBgn0260945.1 230 398 +
Chr1	stalkie_big_nohaplotig	exon	58565593	58565652	98	-	.	Parent=FBgn0260945.1.mrna2;Target=FBgn0260945.1 170 229 +
Chr1	stalkie_big_nohaplotig	CDS	58563680	58563753	.	-	1	Parent=FBgn0260945.1.mrna2;Target=FBgn0260945.1 1682 1755 +
Chr1	stalkie_big_nohaplotig	CDS	58563814	58563949	.	-	2	Parent=FBgn0260945.1.mrna2;Target=FBgn0260945.1 1546 1681 +
Chr1	stalkie_big_nohaplotig	CDS	58564010	58564146	.	-	1	Parent=FBgn0260945.1.mrna2;Target=FBgn0260945.1 1409 1545 +
Chr1	stalkie_big_nohaplotig	CDS	58564258	58565267	.	-	0	Parent=FBgn0260945.1.mrna2;Target=FBgn0260945.1 399 1408 +
Chr1	stalkie_big_nohaplotig	CDS	58565345	58565513	.	-	1	Parent=FBgn0260945.1.mrna2;Target=FBgn0260945.1 230 398 +
Chr1	stalkie_big_nohaplotig	CDS	58565593	58565652	.	-	1	Parent=FBgn0260945.1.mrna2;Target=FBgn0260945.1 170 229 +
Chr1	gffcl	locus	58579153	58587070	.	+	.	ID=RLOC_00008255;geneIDs=FBgn0261674.1.path1;transcripts=FBgn0261674.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58579153	58587070	.	+	.	ID=FBgn0261674.1.mrna1;geneID=FBgn0261674.1.path1;Name=FBgn0261674.1;Dir=sensecoverage=100.0;identity=99.4;matches=1449;mismatches=9;indels=0;unknowns=0;locus=RLOC_00008255
Chr1	stalkie_big_nohaplotig	exon	58579153	58579241	100	+	.	Parent=FBgn0261674.1.mrna1;Target=FBgn0261674.1 1 89 +
Chr1	stalkie_big_nohaplotig	exon	58585218	58585408	98	+	.	Parent=FBgn0261674.1.mrna1;Target=FBgn0261674.1 90 280 +
Chr1	stalkie_big_nohaplotig	exon	58585492	58585745	98	+	.	Parent=FBgn0261674.1.mrna1;Target=FBgn0261674.1 281 534 +
Chr1	stalkie_big_nohaplotig	exon	58585812	58586087	99	+	.	Parent=FBgn0261674.1.mrna1;Target=FBgn0261674.1 535 810 +
Chr1	stalkie_big_nohaplotig	exon	58586282	58586576	99	+	.	Parent=FBgn0261674.1.mrna1;Target=FBgn0261674.1 811 1105 +
Chr1	stalkie_big_nohaplotig	exon	58586657	58586857	100	+	.	Parent=FBgn0261674.1.mrna1;Target=FBgn0261674.1 1106 1306 +
Chr1	stalkie_big_nohaplotig	exon	58586919	58587070	100	+	.	Parent=FBgn0261674.1.mrna1;Target=FBgn0261674.1 1307 1458 +
Chr1	stalkie_big_nohaplotig	CDS	58579153	58579241	.	+	0	Parent=FBgn0261674.1.mrna1;Target=FBgn0261674.1 1 89 +
Chr1	stalkie_big_nohaplotig	CDS	58585218	58585408	.	+	1	Parent=FBgn0261674.1.mrna1;Target=FBgn0261674.1 90 280 +
Chr1	stalkie_big_nohaplotig	CDS	58585492	58585745	.	+	2	Parent=FBgn0261674.1.mrna1;Target=FBgn0261674.1 281 534 +
Chr1	stalkie_big_nohaplotig	CDS	58585812	58586087	.	+	0	Parent=FBgn0261674.1.mrna1;Target=FBgn0261674.1 535 810 +
Chr1	stalkie_big_nohaplotig	CDS	58586282	58586576	.	+	0	Parent=FBgn0261674.1.mrna1;Target=FBgn0261674.1 811 1105 +
Chr1	stalkie_big_nohaplotig	CDS	58586657	58586857	.	+	2	Parent=FBgn0261674.1.mrna1;Target=FBgn0261674.1 1106 1306 +
Chr1	stalkie_big_nohaplotig	CDS	58586919	58587070	.	+	2	Parent=FBgn0261674.1.mrna1;Target=FBgn0261674.1 1307 1458 +
Chr1	gffcl	locus	58625839	58628672	.	-	.	ID=RLOC_00008256;geneIDs=Dv_FBgn0201266.4.path1;transcripts=Dv_FBgn0201266.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58625839	58628672	.	-	.	ID=Dv_FBgn0201266.4.mrna1;geneID=Dv_FBgn0201266.4.path1;Name=Dv_FBgn0201266.4;Dir=sensecoverage=100.0;identity=98.6;matches=1518;mismatches=21;indels=0;unknowns=0;locus=RLOC_00008256
Chr1	stalkie_big_nohaplotig	exon	58625839	58625864	100	-	.	Parent=Dv_FBgn0201266.4.mrna1;Target=Dv_FBgn0201266.4 1514 1539 +
Chr1	stalkie_big_nohaplotig	exon	58626276	58626527	99	-	.	Parent=Dv_FBgn0201266.4.mrna1;Target=Dv_FBgn0201266.4 1262 1513 +
Chr1	stalkie_big_nohaplotig	exon	58627176	58627516	97	-	.	Parent=Dv_FBgn0201266.4.mrna1;Target=Dv_FBgn0201266.4 921 1261 +
Chr1	stalkie_big_nohaplotig	exon	58627576	58627761	98	-	.	Parent=Dv_FBgn0201266.4.mrna1;Target=Dv_FBgn0201266.4 735 920 +
Chr1	stalkie_big_nohaplotig	exon	58627819	58627921	100	-	.	Parent=Dv_FBgn0201266.4.mrna1;Target=Dv_FBgn0201266.4 632 734 +
Chr1	stalkie_big_nohaplotig	exon	58627978	58628368	99	-	.	Parent=Dv_FBgn0201266.4.mrna1;Target=Dv_FBgn0201266.4 241 631 +
Chr1	stalkie_big_nohaplotig	exon	58628433	58628672	98	-	.	Parent=Dv_FBgn0201266.4.mrna1;Target=Dv_FBgn0201266.4 1 240 +
Chr1	stalkie_big_nohaplotig	CDS	58625839	58625864	.	-	2	Parent=Dv_FBgn0201266.4.mrna1;Target=Dv_FBgn0201266.4 1514 1539 +
Chr1	stalkie_big_nohaplotig	CDS	58626276	58626527	.	-	2	Parent=Dv_FBgn0201266.4.mrna1;Target=Dv_FBgn0201266.4 1262 1513 +
Chr1	stalkie_big_nohaplotig	CDS	58627176	58627516	.	-	1	Parent=Dv_FBgn0201266.4.mrna1;Target=Dv_FBgn0201266.4 921 1261 +
Chr1	stalkie_big_nohaplotig	CDS	58627576	58627761	.	-	1	Parent=Dv_FBgn0201266.4.mrna1;Target=Dv_FBgn0201266.4 735 920 +
Chr1	stalkie_big_nohaplotig	CDS	58627819	58627921	.	-	2	Parent=Dv_FBgn0201266.4.mrna1;Target=Dv_FBgn0201266.4 632 734 +
Chr1	stalkie_big_nohaplotig	CDS	58627978	58628368	.	-	0	Parent=Dv_FBgn0201266.4.mrna1;Target=Dv_FBgn0201266.4 241 631 +
Chr1	stalkie_big_nohaplotig	CDS	58628433	58628672	.	-	0	Parent=Dv_FBgn0201266.4.mrna1;Target=Dv_FBgn0201266.4 1 240 +
Chr1	gffcl	locus	58639845	58641433	.	+	.	ID=RLOC_00008257;geneIDs=FBgn0052095.1.path1;transcripts=FBgn0052095.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58639845	58641433	.	+	.	ID=FBgn0052095.1.mrna1;geneID=FBgn0052095.1.path1;Name=FBgn0052095.1;Dir=sensecoverage=100.0;identity=99.3;matches=1403;mismatches=10;indels=0;unknowns=0;locus=RLOC_00008257
Chr1	stalkie_big_nohaplotig	exon	58639845	58639899	100	+	.	Parent=FBgn0052095.1.mrna1;Target=FBgn0052095.1 1 55 +
Chr1	stalkie_big_nohaplotig	exon	58639955	58640810	99	+	.	Parent=FBgn0052095.1.mrna1;Target=FBgn0052095.1 56 911 +
Chr1	stalkie_big_nohaplotig	exon	58640875	58640944	100	+	.	Parent=FBgn0052095.1.mrna1;Target=FBgn0052095.1 912 981 +
Chr1	stalkie_big_nohaplotig	exon	58641002	58641433	99	+	.	Parent=FBgn0052095.1.mrna1;Target=FBgn0052095.1 982 1413 +
Chr1	stalkie_big_nohaplotig	CDS	58639845	58639899	.	+	0	Parent=FBgn0052095.1.mrna1;Target=FBgn0052095.1 1 55 +
Chr1	stalkie_big_nohaplotig	CDS	58639955	58640810	.	+	2	Parent=FBgn0052095.1.mrna1;Target=FBgn0052095.1 56 911 +
Chr1	stalkie_big_nohaplotig	CDS	58640875	58640944	.	+	1	Parent=FBgn0052095.1.mrna1;Target=FBgn0052095.1 912 981 +
Chr1	stalkie_big_nohaplotig	CDS	58641002	58641433	.	+	0	Parent=FBgn0052095.1.mrna1;Target=FBgn0052095.1 982 1413 +
Chr1	gffcl	locus	58641897	58643287	.	.	.	ID=RLOC_00008258;geneIDs=FBgn0036213.1.path1,comp143332_c0_seq1.path1,comp148027_c0_seq1.path1;transcripts=FBgn0036213.1.mrna1,comp148027_c0_seq1.mrna1,comp143332_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58641897	58643278	.	-	.	ID=FBgn0036213.1.mrna1;geneID=FBgn0036213.1.path1;Name=FBgn0036213.1;Dir=sensecoverage=100.0;identity=99.2;matches=655;mismatches=5;indels=0;unknowns=0;locus=RLOC_00008258
Chr1	stalkie_big_nohaplotig	exon	58641897	58642386	99	-	.	Parent=FBgn0036213.1.mrna1;Target=FBgn0036213.1 171 660 +
Chr1	stalkie_big_nohaplotig	exon	58642790	58642945	99	-	.	Parent=FBgn0036213.1.mrna1;Target=FBgn0036213.1 15 170 +
Chr1	stalkie_big_nohaplotig	exon	58643265	58643278	100	-	.	Parent=FBgn0036213.1.mrna1;Target=FBgn0036213.1 1 14 +
Chr1	stalkie_big_nohaplotig	CDS	58641897	58642386	.	-	1	Parent=FBgn0036213.1.mrna1;Target=FBgn0036213.1 171 660 +
Chr1	stalkie_big_nohaplotig	CDS	58642790	58642945	.	-	1	Parent=FBgn0036213.1.mrna1;Target=FBgn0036213.1 15 170 +
Chr1	stalkie_big_nohaplotig	CDS	58643265	58643278	.	-	0	Parent=FBgn0036213.1.mrna1;Target=FBgn0036213.1 1 14 +
Chr1	stalkie_big_nohaplotig	mRNA	58642340	58642598	.	-	.	ID=comp148027_c0_seq1.mrna1;geneID=comp148027_c0_seq1.path1;Name=comp148027_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=257;mismatches=2;indels=1;unknowns=0;Target=comp148027_c0_seq1 260 1 .;CDS_Target=comp148027_c0_seq1 173 117 .;locus=RLOC_00008258
Chr1	stalkie_big_nohaplotig	exon	58642340	58642598	98	-	.	Parent=comp148027_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	58642427	58642483	.	-	0	Parent=comp148027_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58642922	58643287	.	+	.	ID=comp143332_c0_seq1.mrna1;geneID=comp143332_c0_seq1.path1;Name=comp143332_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=364;mismatches=2;indels=0;unknowns=0;Target=comp143332_c0_seq1 366 1 .;CDS_Target=comp143332_c0_seq1 196 107 .;locus=RLOC_00008258
Chr1	stalkie_big_nohaplotig	exon	58642922	58643287	99	+	.	Parent=comp143332_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	58643028	58643117	.	+	0	Parent=comp143332_c0_seq1.mrna1
Chr1	gffcl	locus	58645935	58646339	.	-	.	ID=RLOC_00008259;geneIDs=comp146597_c0_seq1.path1;transcripts=comp146597_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58645935	58646339	.	-	.	ID=comp146597_c0_seq1.mrna1;geneID=comp146597_c0_seq1.path1;Name=comp146597_c0_seq1;Dir=indeterminatecoverage=96.6;identity=94.1;matches=400;mismatches=5;indels=20;unknowns=0;Target=comp146597_c0_seq1 440 16 .;CDS_Target=comp146597_c0_seq1 219 130 .;locus=RLOC_00008259
Chr1	stalkie_big_nohaplotig	exon	58645935	58646339	94	-	.	Parent=comp146597_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	58646156	58646225	.	-	0	Parent=comp146597_c0_seq1.mrna1
Chr1	gffcl	locus	58646433	58654505	.	+	.	ID=RLOC_00008260;geneIDs=FBgn0036211.1.path1;transcripts=FBgn0036211.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58646433	58654505	.	+	.	ID=FBgn0036211.1.mrna1;geneID=FBgn0036211.1.path1;Name=FBgn0036211.1;Dir=sensecoverage=100.0;identity=99.5;matches=1039;mismatches=5;indels=0;unknowns=0;locus=RLOC_00008260
Chr1	stalkie_big_nohaplotig	exon	58646433	58646549	100	+	.	Parent=FBgn0036211.1.mrna1;Target=FBgn0036211.1 1 117 +
Chr1	stalkie_big_nohaplotig	exon	58653242	58653895	99	+	.	Parent=FBgn0036211.1.mrna1;Target=FBgn0036211.1 118 771 +
Chr1	stalkie_big_nohaplotig	exon	58653969	58654071	100	+	.	Parent=FBgn0036211.1.mrna1;Target=FBgn0036211.1 772 874 +
Chr1	stalkie_big_nohaplotig	exon	58654336	58654505	99	+	.	Parent=FBgn0036211.1.mrna1;Target=FBgn0036211.1 875 1044 +
Chr1	stalkie_big_nohaplotig	CDS	58646433	58646549	.	+	0	Parent=FBgn0036211.1.mrna1;Target=FBgn0036211.1 1 117 +
Chr1	stalkie_big_nohaplotig	CDS	58653242	58653895	.	+	0	Parent=FBgn0036211.1.mrna1;Target=FBgn0036211.1 118 771 +
Chr1	stalkie_big_nohaplotig	CDS	58653969	58654071	.	+	0	Parent=FBgn0036211.1.mrna1;Target=FBgn0036211.1 772 874 +
Chr1	stalkie_big_nohaplotig	CDS	58654336	58654505	.	+	2	Parent=FBgn0036211.1.mrna1;Target=FBgn0036211.1 875 1044 +
Chr1	gffcl	locus	58659426	58662891	.	+	.	ID=RLOC_00008261;geneIDs=comp162797_c4_seq1.path1;transcripts=comp162797_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58659426	58662891	.	+	.	ID=comp162797_c4_seq1.mrna1;geneID=comp162797_c4_seq1.path1;Name=comp162797_c4_seq1;Dir=antisensecoverage=100.0;identity=98.4;matches=2280;mismatches=19;indels=18;unknowns=0;locus=RLOC_00008261
Chr1	stalkie_big_nohaplotig	exon	58659426	58659828	98	+	.	Parent=comp162797_c4_seq1.mrna1;Target=comp162797_c4_seq1 1913 2315 -
Chr1	stalkie_big_nohaplotig	exon	58660994	58662891	98	+	.	Parent=comp162797_c4_seq1.mrna1;Target=comp162797_c4_seq1 1 1912 -
Chr1	stalkie_big_nohaplotig	CDS	58659583	58659828	.	+	0	Parent=comp162797_c4_seq1.mrna1;Target=comp162797_c4_seq1 1913 2158 .
Chr1	stalkie_big_nohaplotig	CDS	58660994	58661347	.	+	0	Parent=comp162797_c4_seq1.mrna1;Target=comp162797_c4_seq1 1559 1912 .
Chr1	gffcl	locus	58663377	58664486	.	-	.	ID=RLOC_00008262;geneIDs=FBgn0030915.1.path1;transcripts=FBgn0030915.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58663377	58664486	.	-	.	ID=FBgn0030915.1.mrna1;geneID=FBgn0030915.1.path1;Name=FBgn0030915.1;Dir=sensecoverage=100.0;identity=99.7;matches=915;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008262
Chr1	stalkie_big_nohaplotig	exon	58663377	58663445	100	-	.	Parent=FBgn0030915.1.mrna1;Target=FBgn0030915.1 850 918 +
Chr1	stalkie_big_nohaplotig	exon	58663562	58663670	100	-	.	Parent=FBgn0030915.1.mrna1;Target=FBgn0030915.1 741 849 +
Chr1	stalkie_big_nohaplotig	exon	58663747	58664486	99	-	.	Parent=FBgn0030915.1.mrna1;Target=FBgn0030915.1 1 740 +
Chr1	stalkie_big_nohaplotig	CDS	58663377	58663445	.	-	0	Parent=FBgn0030915.1.mrna1;Target=FBgn0030915.1 850 918 +
Chr1	stalkie_big_nohaplotig	CDS	58663562	58663670	.	-	1	Parent=FBgn0030915.1.mrna1;Target=FBgn0030915.1 741 849 +
Chr1	stalkie_big_nohaplotig	CDS	58663747	58664486	.	-	0	Parent=FBgn0030915.1.mrna1;Target=FBgn0030915.1 1 740 +
Chr1	gffcl	locus	58666970	58676247	.	+	.	ID=RLOC_00008263;geneIDs=ORF2439.path1;transcripts=ORF2439.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58666970	58676247	.	+	.	ID=ORF2439.mrna1;geneID=ORF2439.path1;Name=ORF2439;Dir=sensecoverage=83.9;identity=100.0;matches=720;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008263
Chr1	stalkie_big_nohaplotig	exon	58666970	58667076	100	+	.	Parent=ORF2439.mrna1;Target=ORF2439 2 108 +
Chr1	stalkie_big_nohaplotig	exon	58667150	58667327	100	+	.	Parent=ORF2439.mrna1;Target=ORF2439 109 286 +
Chr1	stalkie_big_nohaplotig	exon	58667397	58667819	100	+	.	Parent=ORF2439.mrna1;Target=ORF2439 287 709 +
Chr1	stalkie_big_nohaplotig	exon	58671282	58671286	100	+	.	Parent=ORF2439.mrna1;Target=ORF2439 710 714 +
Chr1	stalkie_big_nohaplotig	exon	58676241	58676247	100	+	.	Parent=ORF2439.mrna1;Target=ORF2439 715 721 +
Chr1	stalkie_big_nohaplotig	CDS	58666972	58667076	.	+	0	Parent=ORF2439.mrna1;Target=ORF2439 4 108 +
Chr1	stalkie_big_nohaplotig	CDS	58667150	58667327	.	+	0	Parent=ORF2439.mrna1;Target=ORF2439 109 286 +
Chr1	stalkie_big_nohaplotig	CDS	58667397	58667819	.	+	2	Parent=ORF2439.mrna1;Target=ORF2439 287 709 +
Chr1	stalkie_big_nohaplotig	CDS	58671282	58671286	.	+	2	Parent=ORF2439.mrna1;Target=ORF2439 710 714 +
Chr1	stalkie_big_nohaplotig	CDS	58676241	58676246	.	+	0	Parent=ORF2439.mrna1;Target=ORF2439 715 720 +
Chr1	gffcl	locus	58668296	58668978	.	-	.	ID=RLOC_00008264;geneIDs=comp1153347_c0_seq1.path1;transcripts=comp1153347_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58668296	58668978	.	-	.	ID=comp1153347_c0_seq1.mrna1;geneID=comp1153347_c0_seq1.path1;Name=comp1153347_c0_seq1;Dir=sensecoverage=95.0;identity=99.8;matches=494;mismatches=1;indels=0;unknowns=0;Target=comp1153347_c0_seq1 226 378 +;locus=RLOC_00008264
Chr1	stalkie_big_nohaplotig	exon	58668296	58668653	99	-	.	Parent=comp1153347_c0_seq1.mrna1;Target=comp1153347_c0_seq1 163 520 +
Chr1	stalkie_big_nohaplotig	exon	58668842	58668978	100	-	.	Parent=comp1153347_c0_seq1.mrna1;Target=comp1153347_c0_seq1 26 162 +
Chr1	stalkie_big_nohaplotig	CDS	58668438	58668590	.	-	0	Parent=comp1153347_c0_seq1.mrna1
Chr1	gffcl	locus	58749437	58749999	.	+	.	ID=RLOC_00008266;geneIDs=comp156943_c0_seq1.path1;transcripts=comp156943_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58749437	58749999	.	+	.	ID=comp156943_c0_seq1.mrna1;geneID=comp156943_c0_seq1.path1;Name=comp156943_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=557;mismatches=6;indels=0;unknowns=0;Target=comp156943_c0_seq1 563 1 .;CDS_Target=comp156943_c0_seq1 545 393 .;locus=RLOC_00008266
Chr1	stalkie_big_nohaplotig	exon	58749437	58749999	98	+	.	Parent=comp156943_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	58749829	58749981	.	+	0	Parent=comp156943_c0_seq1.mrna1
Chr1	gffcl	locus	58779651	58780682	.	+	.	ID=RLOC_00008267;geneIDs=comp159338_c0_seq1.path1;transcripts=comp159338_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58779651	58780682	.	+	.	ID=comp159338_c0_seq1.mrna1;geneID=comp159338_c0_seq1.path1;Name=comp159338_c0_seq1;Dir=sensecoverage=100.0;identity=98.2;matches=757;mismatches=14;indels=0;unknowns=0;locus=RLOC_00008267
Chr1	stalkie_big_nohaplotig	exon	58779651	58779976	98	+	.	Parent=comp159338_c0_seq1.mrna1;Target=comp159338_c0_seq1 1 326 +
Chr1	stalkie_big_nohaplotig	exon	58780063	58780147	98	+	.	Parent=comp159338_c0_seq1.mrna1;Target=comp159338_c0_seq1 327 411 +
Chr1	stalkie_big_nohaplotig	exon	58780260	58780346	97	+	.	Parent=comp159338_c0_seq1.mrna1;Target=comp159338_c0_seq1 412 498 +
Chr1	stalkie_big_nohaplotig	exon	58780410	58780682	97	+	.	Parent=comp159338_c0_seq1.mrna1;Target=comp159338_c0_seq1 499 771 +
Chr1	stalkie_big_nohaplotig	CDS	58779755	58779976	.	+	0	Parent=comp159338_c0_seq1.mrna1;Target=comp159338_c0_seq1 105 326 +
Chr1	stalkie_big_nohaplotig	CDS	58780063	58780147	.	+	0	Parent=comp159338_c0_seq1.mrna1;Target=comp159338_c0_seq1 327 411 +
Chr1	stalkie_big_nohaplotig	CDS	58780260	58780300	.	+	2	Parent=comp159338_c0_seq1.mrna1;Target=comp159338_c0_seq1 412 452 +
Chr1	gffcl	locus	58878837	58925355	.	+	.	ID=RLOC_00008268;geneIDs=comp158163_c0_seq1.path1;transcripts=comp158163_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58878837	58925355	.	+	.	ID=comp158163_c0_seq1.mrna1;geneID=comp158163_c0_seq1.path1;Name=comp158163_c0_seq1;Dir=antisensecoverage=99.8;identity=97.2;matches=620;mismatches=14;indels=4;unknowns=0;Target=comp158163_c0_seq1 128 358 .;locus=RLOC_00008268
Chr1	stalkie_big_nohaplotig	exon	58878837	58879116	97	+	.	Parent=comp158163_c0_seq1.mrna1;Target=comp158163_c0_seq1 366 649 -
Chr1	stalkie_big_nohaplotig	exon	58924278	58924539	98	+	.	Parent=comp158163_c0_seq1.mrna1;Target=comp158163_c0_seq1 104 365 -
Chr1	stalkie_big_nohaplotig	exon	58925073	58925081	77	+	.	Parent=comp158163_c0_seq1.mrna1;Target=comp158163_c0_seq1 83 91 -
Chr1	stalkie_big_nohaplotig	exon	58925274	58925355	93	+	.	Parent=comp158163_c0_seq1.mrna1;Target=comp158163_c0_seq1 1 82 -
Chr1	stalkie_big_nohaplotig	CDS	58924285	58924515	.	+	0	Parent=comp158163_c0_seq1.mrna1
Chr1	gffcl	locus	58900718	58901867	.	-	.	ID=RLOC_00008269;geneIDs=comp162671_c0_seq1.path1;transcripts=comp162671_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58900718	58901867	.	-	.	ID=comp162671_c0_seq1.mrna1;geneID=comp162671_c0_seq1.path1;Name=comp162671_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.5;matches=1092;mismatches=48;indels=28;unknowns=0;Target=comp162671_c0_seq1 1158 1 .;CDS_Target=comp162671_c0_seq1 1028 876 .;locus=RLOC_00008269
Chr1	stalkie_big_nohaplotig	exon	58900718	58901867	93	-	.	Parent=comp162671_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	58900849	58901001	.	-	0	Parent=comp162671_c0_seq1.mrna1
Chr1	gffcl	locus	58902435	58933410	.	-	.	ID=RLOC_00008270;geneIDs=FBgn0085449.1.path1;transcripts=FBgn0085449.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	58902435	58933410	.	-	.	ID=FBgn0085449.1.mrna1;geneID=FBgn0085449.1.path1;Name=FBgn0085449.1;Dir=sensecoverage=99.9;identity=99.7;matches=2668;mismatches=8;indels=0;unknowns=0;locus=RLOC_00008270
Chr1	stalkie_big_nohaplotig	exon	58902435	58903329	99	-	.	Parent=FBgn0085449.1.mrna1;Target=FBgn0085449.1 1785 2679 +
Chr1	stalkie_big_nohaplotig	exon	58905321	58905892	99	-	.	Parent=FBgn0085449.1.mrna1;Target=FBgn0085449.1 1213 1784 +
Chr1	stalkie_big_nohaplotig	exon	58932202	58933410	99	-	.	Parent=FBgn0085449.1.mrna1;Target=FBgn0085449.1 4 1212 +
Chr1	stalkie_big_nohaplotig	CDS	58902435	58903329	.	-	1	Parent=FBgn0085449.1.mrna1;Target=FBgn0085449.1 1785 2679 +
Chr1	stalkie_big_nohaplotig	CDS	58905321	58905892	.	-	0	Parent=FBgn0085449.1.mrna1;Target=FBgn0085449.1 1213 1784 +
Chr1	stalkie_big_nohaplotig	CDS	58932202	58933410	.	-	0	Parent=FBgn0085449.1.mrna1;Target=FBgn0085449.1 4 1212 +
Chr1	gffcl	locus	59033860	59035275	.	-	.	ID=RLOC_00008271;geneIDs=FBgn0039882.1.path1;transcripts=FBgn0039882.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59033860	59035275	.	-	.	ID=FBgn0039882.1.mrna1;geneID=FBgn0039882.1.path1;Name=FBgn0039882.1;Dir=sensecoverage=100.0;identity=99.4;matches=1336;mismatches=8;indels=0;unknowns=0;locus=RLOC_00008271
Chr1	stalkie_big_nohaplotig	exon	59033860	59034057	99	-	.	Parent=FBgn0039882.1.mrna1;Target=FBgn0039882.1 1147 1344 +
Chr1	stalkie_big_nohaplotig	exon	59034130	59035275	99	-	.	Parent=FBgn0039882.1.mrna1;Target=FBgn0039882.1 1 1146 +
Chr1	stalkie_big_nohaplotig	CDS	59033860	59034057	.	-	0	Parent=FBgn0039882.1.mrna1;Target=FBgn0039882.1 1147 1344 +
Chr1	stalkie_big_nohaplotig	CDS	59034130	59035275	.	-	0	Parent=FBgn0039882.1.mrna1;Target=FBgn0039882.1 1 1146 +
Chr1	gffcl	locus	59071460	59072150	.	+	.	ID=RLOC_00008272;geneIDs=comp153013_c0_seq1.path1;transcripts=comp153013_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59071460	59072150	.	+	.	ID=comp153013_c0_seq1.mrna1;geneID=comp153013_c0_seq1.path1;Name=comp153013_c0_seq1;Dir=indeterminatecoverage=94.4;identity=97.3;matches=675;mismatches=16;indels=3;unknowns=0;Target=comp153013_c0_seq1 694 1 .;CDS_Target=comp153013_c0_seq1 584 468 .;locus=RLOC_00008272
Chr1	stalkie_big_nohaplotig	exon	59071460	59072150	97	+	.	Parent=comp153013_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	59071924	59072040	.	+	0	Parent=comp153013_c0_seq1.mrna1
Chr1	gffcl	locus	59073471	59076032	.	+	.	ID=RLOC_00008273;geneIDs=comp149697_c0_seq1.path1;transcripts=comp149697_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59073471	59076032	.	+	.	ID=comp149697_c0_seq1.mrna1;geneID=comp149697_c0_seq1.path1;Name=comp149697_c0_seq1;Dir=indeterminatecoverage=85.8;identity=98.4;matches=489;mismatches=8;indels=0;unknowns=0;locus=RLOC_00008273
Chr1	stalkie_big_nohaplotig	exon	59073471	59073599	96	+	.	Parent=comp149697_c0_seq1.mrna1;Target=comp149697_c0_seq1 211 83 .
Chr1	stalkie_big_nohaplotig	exon	59075665	59076032	99	+	.	Parent=comp149697_c0_seq1.mrna1;Target=comp149697_c0_seq1 579 212 .
Chr1	stalkie_big_nohaplotig	CDS	59073545	59073599	.	+	0	Parent=comp149697_c0_seq1.mrna1;Target=comp149697_c0_seq1 211 157 .
Chr1	stalkie_big_nohaplotig	CDS	59075665	59075813	.	+	2	Parent=comp149697_c0_seq1.mrna1;Target=comp149697_c0_seq1 360 212 .
Chr1	gffcl	locus	59082662	59084217	.	-	.	ID=RLOC_00008274;geneIDs=FBgn0086254.4.path1;transcripts=FBgn0086254.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59082662	59084217	.	-	.	ID=FBgn0086254.4.mrna1;geneID=FBgn0086254.4.path1;Name=FBgn0086254.4;Dir=sensecoverage=100.0;identity=99.4;matches=1142;mismatches=7;indels=0;unknowns=0;locus=RLOC_00008274
Chr1	stalkie_big_nohaplotig	exon	59082662	59082692	100	-	.	Parent=FBgn0086254.4.mrna1;Target=FBgn0086254.4 1119 1149 +
Chr1	stalkie_big_nohaplotig	exon	59082765	59082973	99	-	.	Parent=FBgn0086254.4.mrna1;Target=FBgn0086254.4 910 1118 +
Chr1	stalkie_big_nohaplotig	exon	59083047	59083530	99	-	.	Parent=FBgn0086254.4.mrna1;Target=FBgn0086254.4 426 909 +
Chr1	stalkie_big_nohaplotig	exon	59083593	59083735	98	-	.	Parent=FBgn0086254.4.mrna1;Target=FBgn0086254.4 283 425 +
Chr1	stalkie_big_nohaplotig	exon	59083792	59083891	100	-	.	Parent=FBgn0086254.4.mrna1;Target=FBgn0086254.4 183 282 +
Chr1	stalkie_big_nohaplotig	exon	59084036	59084217	98	-	.	Parent=FBgn0086254.4.mrna1;Target=FBgn0086254.4 1 182 +
Chr1	stalkie_big_nohaplotig	CDS	59082662	59082692	.	-	1	Parent=FBgn0086254.4.mrna1;Target=FBgn0086254.4 1119 1149 +
Chr1	stalkie_big_nohaplotig	CDS	59082765	59082973	.	-	0	Parent=FBgn0086254.4.mrna1;Target=FBgn0086254.4 910 1118 +
Chr1	stalkie_big_nohaplotig	CDS	59083047	59083530	.	-	1	Parent=FBgn0086254.4.mrna1;Target=FBgn0086254.4 426 909 +
Chr1	stalkie_big_nohaplotig	CDS	59083593	59083735	.	-	0	Parent=FBgn0086254.4.mrna1;Target=FBgn0086254.4 283 425 +
Chr1	stalkie_big_nohaplotig	CDS	59083792	59083891	.	-	1	Parent=FBgn0086254.4.mrna1;Target=FBgn0086254.4 183 282 +
Chr1	stalkie_big_nohaplotig	CDS	59084036	59084217	.	-	0	Parent=FBgn0086254.4.mrna1;Target=FBgn0086254.4 1 182 +
Chr1	gffcl	locus	59085515	59086464	.	-	.	ID=RLOC_00008275;geneIDs=FBgn0086254.2.path1;transcripts=FBgn0086254.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59085515	59086464	.	-	.	ID=FBgn0086254.2.mrna1;geneID=FBgn0086254.2.path1;Name=FBgn0086254.2;Dir=sensecoverage=100.0;identity=98.8;matches=566;mismatches=7;indels=0;unknowns=0;locus=RLOC_00008275
Chr1	stalkie_big_nohaplotig	exon	59085515	59085575	98	-	.	Parent=FBgn0086254.2.mrna1;Target=FBgn0086254.2 513 573 +
Chr1	stalkie_big_nohaplotig	exon	59085727	59085935	99	-	.	Parent=FBgn0086254.2.mrna1;Target=FBgn0086254.2 304 512 +
Chr1	stalkie_big_nohaplotig	exon	59086162	59086464	98	-	.	Parent=FBgn0086254.2.mrna1;Target=FBgn0086254.2 1 303 +
Chr1	stalkie_big_nohaplotig	CDS	59085515	59085575	.	-	1	Parent=FBgn0086254.2.mrna1;Target=FBgn0086254.2 513 573 +
Chr1	stalkie_big_nohaplotig	CDS	59085727	59085935	.	-	0	Parent=FBgn0086254.2.mrna1;Target=FBgn0086254.2 304 512 +
Chr1	stalkie_big_nohaplotig	CDS	59086162	59086464	.	-	0	Parent=FBgn0086254.2.mrna1;Target=FBgn0086254.2 1 303 +
Chr1	gffcl	locus	59088693	59088754	.	-	.	ID=RLOC_00008276;geneIDs=comp138151_c1_seq1.path2;transcripts=comp138151_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	59088693	59088754	.	-	.	ID=comp138151_c1_seq1.mrna2;geneID=comp138151_c1_seq1.path2;Name=comp138151_c1_seq1;Dir=indeterminatecoverage=8.5;identity=98.4;matches=61;mismatches=1;indels=0;unknowns=0;Target=comp138151_c1_seq1 732 671 .;locus=RLOC_00008276
Chr1	stalkie_big_nohaplotig	exon	59088693	59088754	98	-	.	Parent=comp138151_c1_seq1.mrna2
Chr1	gffcl	locus	59111617	59113792	.	-	.	ID=RLOC_00008278;geneIDs=FBgn0036183.1.path1;transcripts=FBgn0036183.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59111617	59113792	.	-	.	ID=FBgn0036183.1.mrna1;geneID=FBgn0036183.1.path1;Name=FBgn0036183.1;Dir=sensecoverage=100.0;identity=99.4;matches=1070;mismatches=7;indels=0;unknowns=0;locus=RLOC_00008278
Chr1	stalkie_big_nohaplotig	exon	59111617	59111659	97	-	.	Parent=FBgn0036183.1.mrna1;Target=FBgn0036183.1 1035 1077 +
Chr1	stalkie_big_nohaplotig	exon	59112443	59113135	99	-	.	Parent=FBgn0036183.1.mrna1;Target=FBgn0036183.1 342 1034 +
Chr1	stalkie_big_nohaplotig	exon	59113197	59113339	99	-	.	Parent=FBgn0036183.1.mrna1;Target=FBgn0036183.1 199 341 +
Chr1	stalkie_big_nohaplotig	exon	59113595	59113792	99	-	.	Parent=FBgn0036183.1.mrna1;Target=FBgn0036183.1 1 198 +
Chr1	stalkie_big_nohaplotig	CDS	59111617	59111659	.	-	1	Parent=FBgn0036183.1.mrna1;Target=FBgn0036183.1 1035 1077 +
Chr1	stalkie_big_nohaplotig	CDS	59112443	59113135	.	-	1	Parent=FBgn0036183.1.mrna1;Target=FBgn0036183.1 342 1034 +
Chr1	stalkie_big_nohaplotig	CDS	59113197	59113339	.	-	0	Parent=FBgn0036183.1.mrna1;Target=FBgn0036183.1 199 341 +
Chr1	stalkie_big_nohaplotig	CDS	59113595	59113792	.	-	0	Parent=FBgn0036183.1.mrna1;Target=FBgn0036183.1 1 198 +
Chr1	gffcl	locus	59122111	59124393	.	+	.	ID=RLOC_00008280;geneIDs=FBgn0032242.1.path1;transcripts=FBgn0032242.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59122111	59124393	.	+	.	ID=FBgn0032242.1.mrna1;geneID=FBgn0032242.1.path1;Name=FBgn0032242.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2281;mismatches=2;indels=0;unknowns=0;Target=FBgn0032242.1 2283 1 .;locus=RLOC_00008280
Chr1	stalkie_big_nohaplotig	exon	59122111	59124393	99	+	.	Parent=FBgn0032242.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	59122111	59124393	.	+	0	Parent=FBgn0032242.1.mrna1
Chr1	gffcl	locus	59127778	59130592	.	+	.	ID=RLOC_00008281;geneIDs=FBgn0028695.2.path1;transcripts=FBgn0028695.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59127778	59130592	.	+	.	ID=FBgn0028695.2.mrna1;geneID=FBgn0028695.2.path1;Name=FBgn0028695.2;Dir=sensecoverage=100.0;identity=100.0;matches=2663;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008281
Chr1	stalkie_big_nohaplotig	exon	59127778	59128824	100	+	.	Parent=FBgn0028695.2.mrna1;Target=FBgn0028695.2 1 1047 +
Chr1	stalkie_big_nohaplotig	exon	59128925	59129728	100	+	.	Parent=FBgn0028695.2.mrna1;Target=FBgn0028695.2 1048 1851 +
Chr1	stalkie_big_nohaplotig	exon	59129780	59130592	99	+	.	Parent=FBgn0028695.2.mrna1;Target=FBgn0028695.2 1852 2664 +
Chr1	stalkie_big_nohaplotig	CDS	59127778	59128824	.	+	0	Parent=FBgn0028695.2.mrna1;Target=FBgn0028695.2 1 1047 +
Chr1	stalkie_big_nohaplotig	CDS	59128925	59129728	.	+	0	Parent=FBgn0028695.2.mrna1;Target=FBgn0028695.2 1048 1851 +
Chr1	stalkie_big_nohaplotig	CDS	59129780	59130592	.	+	0	Parent=FBgn0028695.2.mrna1;Target=FBgn0028695.2 1852 2664 +
Chr1	gffcl	locus	59132901	59136544	.	+	.	ID=RLOC_00008282;geneIDs=FBgn0042138.1.path1;transcripts=FBgn0042138.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59132901	59136544	.	+	.	ID=FBgn0042138.1.mrna1;geneID=FBgn0042138.1.path1;Name=FBgn0042138.1;Dir=sensecoverage=100.0;identity=100.0;matches=708;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008282
Chr1	stalkie_big_nohaplotig	exon	59132901	59132960	100	+	.	Parent=FBgn0042138.1.mrna1;Target=FBgn0042138.1 1 60 +
Chr1	stalkie_big_nohaplotig	exon	59133034	59133065	100	+	.	Parent=FBgn0042138.1.mrna1;Target=FBgn0042138.1 61 92 +
Chr1	stalkie_big_nohaplotig	exon	59133901	59134288	100	+	.	Parent=FBgn0042138.1.mrna1;Target=FBgn0042138.1 93 480 +
Chr1	stalkie_big_nohaplotig	exon	59134352	59134507	100	+	.	Parent=FBgn0042138.1.mrna1;Target=FBgn0042138.1 481 636 +
Chr1	stalkie_big_nohaplotig	exon	59135255	59135272	100	+	.	Parent=FBgn0042138.1.mrna1;Target=FBgn0042138.1 637 654 +
Chr1	stalkie_big_nohaplotig	exon	59136491	59136544	100	+	.	Parent=FBgn0042138.1.mrna1;Target=FBgn0042138.1 655 708 +
Chr1	stalkie_big_nohaplotig	CDS	59132901	59132960	.	+	0	Parent=FBgn0042138.1.mrna1;Target=FBgn0042138.1 1 60 +
Chr1	stalkie_big_nohaplotig	CDS	59133034	59133065	.	+	0	Parent=FBgn0042138.1.mrna1;Target=FBgn0042138.1 61 92 +
Chr1	stalkie_big_nohaplotig	CDS	59133901	59134288	.	+	1	Parent=FBgn0042138.1.mrna1;Target=FBgn0042138.1 93 480 +
Chr1	stalkie_big_nohaplotig	CDS	59134352	59134507	.	+	0	Parent=FBgn0042138.1.mrna1;Target=FBgn0042138.1 481 636 +
Chr1	stalkie_big_nohaplotig	CDS	59135255	59135272	.	+	0	Parent=FBgn0042138.1.mrna1;Target=FBgn0042138.1 637 654 +
Chr1	stalkie_big_nohaplotig	CDS	59136491	59136544	.	+	0	Parent=FBgn0042138.1.mrna1;Target=FBgn0042138.1 655 708 +
Chr1	gffcl	locus	59136769	59139559	.	-	.	ID=RLOC_00008283;geneIDs=FBgn0026702.1.path1;transcripts=FBgn0026702.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59136769	59139559	.	-	.	ID=FBgn0026702.1.mrna1;geneID=FBgn0026702.1.path1;Name=FBgn0026702.1;Dir=sensecoverage=100.0;identity=99.4;matches=2597;mismatches=16;indels=0;unknowns=0;locus=RLOC_00008283
Chr1	stalkie_big_nohaplotig	exon	59136769	59137110	99	-	.	Parent=FBgn0026702.1.mrna1;Target=FBgn0026702.1 2272 2613 +
Chr1	stalkie_big_nohaplotig	exon	59137175	59137689	100	-	.	Parent=FBgn0026702.1.mrna1;Target=FBgn0026702.1 1757 2271 +
Chr1	stalkie_big_nohaplotig	exon	59137749	59138606	99	-	.	Parent=FBgn0026702.1.mrna1;Target=FBgn0026702.1 899 1756 +
Chr1	stalkie_big_nohaplotig	exon	59138662	59139559	98	-	.	Parent=FBgn0026702.1.mrna1;Target=FBgn0026702.1 1 898 +
Chr1	stalkie_big_nohaplotig	CDS	59136769	59137110	.	-	0	Parent=FBgn0026702.1.mrna1;Target=FBgn0026702.1 2272 2613 +
Chr1	stalkie_big_nohaplotig	CDS	59137175	59137689	.	-	2	Parent=FBgn0026702.1.mrna1;Target=FBgn0026702.1 1757 2271 +
Chr1	stalkie_big_nohaplotig	CDS	59137749	59138606	.	-	2	Parent=FBgn0026702.1.mrna1;Target=FBgn0026702.1 899 1756 +
Chr1	stalkie_big_nohaplotig	CDS	59138662	59139559	.	-	0	Parent=FBgn0026702.1.mrna1;Target=FBgn0026702.1 1 898 +
Chr1	gffcl	locus	59154307	59185472	.	+	.	ID=RLOC_00008284;geneIDs=FBgn0052091.1.path1;transcripts=FBgn0052091.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59154307	59185472	.	+	.	ID=FBgn0052091.1.mrna1;geneID=FBgn0052091.1.path1;Name=FBgn0052091.1;Dir=sensecoverage=100.0;identity=99.7;matches=2046;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008284
Chr1	stalkie_big_nohaplotig	exon	59154307	59154502	99	+	.	Parent=FBgn0052091.1.mrna1;Target=FBgn0052091.1 1 196 +
Chr1	stalkie_big_nohaplotig	exon	59181336	59181465	99	+	.	Parent=FBgn0052091.1.mrna1;Target=FBgn0052091.1 197 326 +
Chr1	stalkie_big_nohaplotig	exon	59183397	59183935	99	+	.	Parent=FBgn0052091.1.mrna1;Target=FBgn0052091.1 327 865 +
Chr1	stalkie_big_nohaplotig	exon	59183992	59184465	99	+	.	Parent=FBgn0052091.1.mrna1;Target=FBgn0052091.1 866 1339 +
Chr1	stalkie_big_nohaplotig	exon	59184524	59184640	100	+	.	Parent=FBgn0052091.1.mrna1;Target=FBgn0052091.1 1340 1456 +
Chr1	stalkie_big_nohaplotig	exon	59184743	59184843	99	+	.	Parent=FBgn0052091.1.mrna1;Target=FBgn0052091.1 1457 1557 +
Chr1	stalkie_big_nohaplotig	exon	59184916	59185071	100	+	.	Parent=FBgn0052091.1.mrna1;Target=FBgn0052091.1 1558 1713 +
Chr1	stalkie_big_nohaplotig	exon	59185134	59185472	100	+	.	Parent=FBgn0052091.1.mrna1;Target=FBgn0052091.1 1714 2052 +
Chr1	stalkie_big_nohaplotig	CDS	59154307	59154502	.	+	0	Parent=FBgn0052091.1.mrna1;Target=FBgn0052091.1 1 196 +
Chr1	stalkie_big_nohaplotig	CDS	59181336	59181465	.	+	2	Parent=FBgn0052091.1.mrna1;Target=FBgn0052091.1 197 326 +
Chr1	stalkie_big_nohaplotig	CDS	59183397	59183935	.	+	1	Parent=FBgn0052091.1.mrna1;Target=FBgn0052091.1 327 865 +
Chr1	stalkie_big_nohaplotig	CDS	59183992	59184465	.	+	2	Parent=FBgn0052091.1.mrna1;Target=FBgn0052091.1 866 1339 +
Chr1	stalkie_big_nohaplotig	CDS	59184524	59184640	.	+	2	Parent=FBgn0052091.1.mrna1;Target=FBgn0052091.1 1340 1456 +
Chr1	stalkie_big_nohaplotig	CDS	59184743	59184843	.	+	2	Parent=FBgn0052091.1.mrna1;Target=FBgn0052091.1 1457 1557 +
Chr1	stalkie_big_nohaplotig	CDS	59184916	59185071	.	+	0	Parent=FBgn0052091.1.mrna1;Target=FBgn0052091.1 1558 1713 +
Chr1	stalkie_big_nohaplotig	CDS	59185134	59185472	.	+	0	Parent=FBgn0052091.1.mrna1;Target=FBgn0052091.1 1714 2052 +
Chr1	gffcl	locus	59187578	59189523	.	-	.	ID=RLOC_00008285;geneIDs=FBgn0036187.1.path1;transcripts=FBgn0036187.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59187578	59189523	.	-	.	ID=FBgn0036187.1.mrna1;geneID=FBgn0036187.1.path1;Name=FBgn0036187.1;Dir=sensecoverage=100.0;identity=99.4;matches=1739;mismatches=10;indels=0;unknowns=0;locus=RLOC_00008285
Chr1	stalkie_big_nohaplotig	exon	59187578	59188000	99	-	.	Parent=FBgn0036187.1.mrna1;Target=FBgn0036187.1 1327 1749 +
Chr1	stalkie_big_nohaplotig	exon	59188059	59189315	99	-	.	Parent=FBgn0036187.1.mrna1;Target=FBgn0036187.1 70 1326 +
Chr1	stalkie_big_nohaplotig	exon	59189455	59189523	100	-	.	Parent=FBgn0036187.1.mrna1;Target=FBgn0036187.1 1 69 +
Chr1	stalkie_big_nohaplotig	CDS	59187578	59188000	.	-	0	Parent=FBgn0036187.1.mrna1;Target=FBgn0036187.1 1327 1749 +
Chr1	stalkie_big_nohaplotig	CDS	59188059	59189315	.	-	0	Parent=FBgn0036187.1.mrna1;Target=FBgn0036187.1 70 1326 +
Chr1	stalkie_big_nohaplotig	CDS	59189455	59189523	.	-	0	Parent=FBgn0036187.1.mrna1;Target=FBgn0036187.1 1 69 +
Chr1	gffcl	locus	59223210	59223654	.	-	.	ID=RLOC_00008288;geneIDs=comp149745_c0_seq1.path1;transcripts=comp149745_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59223210	59223654	.	-	.	ID=comp149745_c0_seq1.mrna1;geneID=comp149745_c0_seq1.path1;Name=comp149745_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=443;mismatches=2;indels=0;unknowns=0;Target=comp149745_c0_seq1 445 1 .;CDS_Target=comp149745_c0_seq1 235 95 .;locus=RLOC_00008288
Chr1	stalkie_big_nohaplotig	exon	59223210	59223654	99	-	.	Parent=comp149745_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	59223420	59223560	.	-	0	Parent=comp149745_c0_seq1.mrna1
Chr1	gffcl	locus	59287546	59290880	.	+	.	ID=RLOC_00008290;geneIDs=FBgn0036191.1.path1;transcripts=FBgn0036191.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59287546	59290880	.	+	.	ID=FBgn0036191.1.mrna1;geneID=FBgn0036191.1.path1;Name=FBgn0036191.1;Dir=sensecoverage=100.0;identity=99.9;matches=1796;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008290
Chr1	stalkie_big_nohaplotig	exon	59287546	59287642	100	+	.	Parent=FBgn0036191.1.mrna1;Target=FBgn0036191.1 1 97 +
Chr1	stalkie_big_nohaplotig	exon	59288039	59288177	100	+	.	Parent=FBgn0036191.1.mrna1;Target=FBgn0036191.1 98 236 +
Chr1	stalkie_big_nohaplotig	exon	59288240	59289074	99	+	.	Parent=FBgn0036191.1.mrna1;Target=FBgn0036191.1 237 1071 +
Chr1	stalkie_big_nohaplotig	exon	59289147	59289605	100	+	.	Parent=FBgn0036191.1.mrna1;Target=FBgn0036191.1 1072 1530 +
Chr1	stalkie_big_nohaplotig	exon	59289667	59289862	100	+	.	Parent=FBgn0036191.1.mrna1;Target=FBgn0036191.1 1531 1726 +
Chr1	stalkie_big_nohaplotig	exon	59290810	59290880	100	+	.	Parent=FBgn0036191.1.mrna1;Target=FBgn0036191.1 1727 1797 +
Chr1	stalkie_big_nohaplotig	CDS	59287546	59287642	.	+	0	Parent=FBgn0036191.1.mrna1;Target=FBgn0036191.1 1 97 +
Chr1	stalkie_big_nohaplotig	CDS	59288039	59288177	.	+	2	Parent=FBgn0036191.1.mrna1;Target=FBgn0036191.1 98 236 +
Chr1	stalkie_big_nohaplotig	CDS	59288240	59289074	.	+	1	Parent=FBgn0036191.1.mrna1;Target=FBgn0036191.1 237 1071 +
Chr1	stalkie_big_nohaplotig	CDS	59289147	59289605	.	+	0	Parent=FBgn0036191.1.mrna1;Target=FBgn0036191.1 1072 1530 +
Chr1	stalkie_big_nohaplotig	CDS	59289667	59289862	.	+	0	Parent=FBgn0036191.1.mrna1;Target=FBgn0036191.1 1531 1726 +
Chr1	stalkie_big_nohaplotig	CDS	59290810	59290880	.	+	2	Parent=FBgn0036191.1.mrna1;Target=FBgn0036191.1 1727 1797 +
Chr1	gffcl	locus	59291292	59292769	.	-	.	ID=RLOC_00008291;geneIDs=FBgn0036192.1.path1;transcripts=FBgn0036192.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59291292	59292769	.	-	.	ID=FBgn0036192.1.mrna1;geneID=FBgn0036192.1.path1;Name=FBgn0036192.1;Dir=sensecoverage=100.0;identity=99.8;matches=497;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008291
Chr1	stalkie_big_nohaplotig	exon	59291292	59291387	100	-	.	Parent=FBgn0036192.1.mrna1;Target=FBgn0036192.1 403 498 +
Chr1	stalkie_big_nohaplotig	exon	59291484	59291570	100	-	.	Parent=FBgn0036192.1.mrna1;Target=FBgn0036192.1 316 402 +
Chr1	stalkie_big_nohaplotig	exon	59291807	59291891	98	-	.	Parent=FBgn0036192.1.mrna1;Target=FBgn0036192.1 231 315 +
Chr1	stalkie_big_nohaplotig	exon	59291955	59292167	100	-	.	Parent=FBgn0036192.1.mrna1;Target=FBgn0036192.1 18 230 +
Chr1	stalkie_big_nohaplotig	exon	59292753	59292769	100	-	.	Parent=FBgn0036192.1.mrna1;Target=FBgn0036192.1 1 17 +
Chr1	stalkie_big_nohaplotig	CDS	59291292	59291387	.	-	0	Parent=FBgn0036192.1.mrna1;Target=FBgn0036192.1 403 498 +
Chr1	stalkie_big_nohaplotig	CDS	59291484	59291570	.	-	0	Parent=FBgn0036192.1.mrna1;Target=FBgn0036192.1 316 402 +
Chr1	stalkie_big_nohaplotig	CDS	59291807	59291891	.	-	1	Parent=FBgn0036192.1.mrna1;Target=FBgn0036192.1 231 315 +
Chr1	stalkie_big_nohaplotig	CDS	59291955	59292167	.	-	1	Parent=FBgn0036192.1.mrna1;Target=FBgn0036192.1 18 230 +
Chr1	stalkie_big_nohaplotig	CDS	59292753	59292769	.	-	0	Parent=FBgn0036192.1.mrna1;Target=FBgn0036192.1 1 17 +
Chr1	gffcl	locus	59295322	59298214	.	-	.	ID=RLOC_00008292;geneIDs=FBgn0036194.1.path1;transcripts=FBgn0036194.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59295322	59298214	.	-	.	ID=FBgn0036194.1.mrna1;geneID=FBgn0036194.1.path1;Name=FBgn0036194.1;Dir=sensecoverage=100.0;identity=99.6;matches=1461;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008292
Chr1	stalkie_big_nohaplotig	exon	59295322	59295918	99	-	.	Parent=FBgn0036194.1.mrna1;Target=FBgn0036194.1 871 1467 +
Chr1	stalkie_big_nohaplotig	exon	59295983	59296781	99	-	.	Parent=FBgn0036194.1.mrna1;Target=FBgn0036194.1 72 870 +
Chr1	stalkie_big_nohaplotig	exon	59298144	59298214	100	-	.	Parent=FBgn0036194.1.mrna1;Target=FBgn0036194.1 1 71 +
Chr1	stalkie_big_nohaplotig	CDS	59295322	59295918	.	-	0	Parent=FBgn0036194.1.mrna1;Target=FBgn0036194.1 871 1467 +
Chr1	stalkie_big_nohaplotig	CDS	59295983	59296781	.	-	1	Parent=FBgn0036194.1.mrna1;Target=FBgn0036194.1 72 870 +
Chr1	stalkie_big_nohaplotig	CDS	59298144	59298214	.	-	0	Parent=FBgn0036194.1.mrna1;Target=FBgn0036194.1 1 71 +
Chr1	gffcl	locus	59299015	59302356	.	+	.	ID=RLOC_00008293;geneIDs=FBgn0029977.1.path1;transcripts=FBgn0029977.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59299015	59302356	.	+	.	ID=FBgn0029977.1.mrna1;geneID=FBgn0029977.1.path1;Name=FBgn0029977.1;Dir=sensecoverage=100.0;identity=98.6;matches=1411;mismatches=20;indels=0;unknowns=0;locus=RLOC_00008293
Chr1	stalkie_big_nohaplotig	exon	59299015	59299912	98	+	.	Parent=FBgn0029977.1.mrna1;Target=FBgn0029977.1 1 898 +
Chr1	stalkie_big_nohaplotig	exon	59299976	59300129	98	+	.	Parent=FBgn0029977.1.mrna1;Target=FBgn0029977.1 899 1052 +
Chr1	stalkie_big_nohaplotig	exon	59301978	59302356	99	+	.	Parent=FBgn0029977.1.mrna1;Target=FBgn0029977.1 1053 1431 +
Chr1	stalkie_big_nohaplotig	CDS	59299015	59299912	.	+	0	Parent=FBgn0029977.1.mrna1;Target=FBgn0029977.1 1 898 +
Chr1	stalkie_big_nohaplotig	CDS	59299976	59300129	.	+	2	Parent=FBgn0029977.1.mrna1;Target=FBgn0029977.1 899 1052 +
Chr1	stalkie_big_nohaplotig	CDS	59301978	59302356	.	+	1	Parent=FBgn0029977.1.mrna1;Target=FBgn0029977.1 1053 1431 +
Chr1	gffcl	locus	59307489	59308351	.	.	.	ID=RLOC_00008295;geneIDs=comp145042_c0_seq1.path1,comp146424_c0_seq1.path1;transcripts=comp146424_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59307832	59308351	.	+	.	ID=comp146424_c0_seq1.mrna1;geneID=comp146424_c0_seq1.path1;Name=comp146424_c0_seq1;Dir=indeterminatecoverage=93.3;identity=96.0;matches=499;mismatches=5;indels=16;unknowns=0;Target=comp146424_c0_seq1 505 2 .;CDS_Target=comp146424_c0_seq1 133 71 .;locus=RLOC_00008295
Chr1	stalkie_big_nohaplotig	exon	59307832	59308351	95	+	.	Parent=comp146424_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	59307917	59307979	.	+	0	Parent=comp146424_c0_seq1.mrna1
Chr1	gffcl	locus	59308970	59337143	.	-	.	ID=RLOC_00008296;geneIDs=FBgn0036196.1.path1;transcripts=FBgn0036196.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59308970	59337143	.	-	.	ID=FBgn0036196.1.mrna1;geneID=FBgn0036196.1.path1;Name=FBgn0036196.1;Dir=sensecoverage=100.0;identity=99.9;matches=1061;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008296
Chr1	stalkie_big_nohaplotig	exon	59308970	59309350	99	-	.	Parent=FBgn0036196.1.mrna1;Target=FBgn0036196.1 682 1062 +
Chr1	stalkie_big_nohaplotig	exon	59309415	59309507	100	-	.	Parent=FBgn0036196.1.mrna1;Target=FBgn0036196.1 589 681 +
Chr1	stalkie_big_nohaplotig	exon	59313572	59313753	100	-	.	Parent=FBgn0036196.1.mrna1;Target=FBgn0036196.1 407 588 +
Chr1	stalkie_big_nohaplotig	exon	59314027	59314307	100	-	.	Parent=FBgn0036196.1.mrna1;Target=FBgn0036196.1 126 406 +
Chr1	stalkie_big_nohaplotig	exon	59337019	59337143	100	-	.	Parent=FBgn0036196.1.mrna1;Target=FBgn0036196.1 1 125 +
Chr1	stalkie_big_nohaplotig	CDS	59308970	59309350	.	-	0	Parent=FBgn0036196.1.mrna1;Target=FBgn0036196.1 682 1062 +
Chr1	stalkie_big_nohaplotig	CDS	59309415	59309507	.	-	0	Parent=FBgn0036196.1.mrna1;Target=FBgn0036196.1 589 681 +
Chr1	stalkie_big_nohaplotig	CDS	59313572	59313753	.	-	2	Parent=FBgn0036196.1.mrna1;Target=FBgn0036196.1 407 588 +
Chr1	stalkie_big_nohaplotig	CDS	59314027	59314307	.	-	1	Parent=FBgn0036196.1.mrna1;Target=FBgn0036196.1 126 406 +
Chr1	stalkie_big_nohaplotig	CDS	59337019	59337143	.	-	0	Parent=FBgn0036196.1.mrna1;Target=FBgn0036196.1 1 125 +
Chr1	gffcl	locus	59340160	59340426	.	+	.	ID=RLOC_00008297;geneIDs=FBgn0261353.1.path1;transcripts=FBgn0261353.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59340160	59340426	.	+	.	ID=FBgn0261353.1.mrna1;geneID=FBgn0261353.1.path1;Name=FBgn0261353.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=266;mismatches=1;indels=0;unknowns=0;Target=FBgn0261353.1 267 1 .;locus=RLOC_00008297
Chr1	stalkie_big_nohaplotig	exon	59340160	59340426	99	+	.	Parent=FBgn0261353.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	59340160	59340426	.	+	0	Parent=FBgn0261353.1.mrna1
Chr1	gffcl	locus	59340593	59341601	.	+	.	ID=RLOC_00008298;geneIDs=FBgn0261381.1.path1;transcripts=FBgn0261381.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59340593	59341601	.	+	.	ID=FBgn0261381.1.mrna1;geneID=FBgn0261381.1.path1;Name=FBgn0261381.1;Dir=indeterminatecoverage=99.2;identity=99.7;matches=1006;mismatches=3;indels=0;unknowns=0;Target=FBgn0261381.1 1017 9 .;CDS_Target=FBgn0261381.1 1017 10 .;locus=RLOC_00008298
Chr1	stalkie_big_nohaplotig	exon	59340593	59341601	99	+	.	Parent=FBgn0261381.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	59340594	59341601	.	+	0	Parent=FBgn0261381.1.mrna1
Chr1	gffcl	locus	59341702	59342004	.	-	.	ID=RLOC_00008299;geneIDs=comp88496_c0_seq1.path1;transcripts=comp88496_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59341702	59342004	.	-	.	ID=comp88496_c0_seq1.mrna1;geneID=comp88496_c0_seq1.path1;Name=comp88496_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=303;mismatches=0;indels=0;unknowns=0;Target=comp88496_c0_seq1 303 1 .;CDS_Target=comp88496_c0_seq1 261 193 .;locus=RLOC_00008299
Chr1	stalkie_big_nohaplotig	exon	59341702	59342004	100	-	.	Parent=comp88496_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	59341744	59341812	.	-	0	Parent=comp88496_c0_seq1.mrna1
Chr1	gffcl	locus	59343274	59343907	.	-	.	ID=RLOC_00008300;geneIDs=FBgn0036198.1.path1;transcripts=FBgn0036198.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59343274	59343907	.	-	.	ID=FBgn0036198.1.mrna1;geneID=FBgn0036198.1.path1;Name=FBgn0036198.1;Dir=sensecoverage=100.0;identity=99.8;matches=497;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008300
Chr1	stalkie_big_nohaplotig	exon	59343274	59343557	100	-	.	Parent=FBgn0036198.1.mrna1;Target=FBgn0036198.1 215 498 +
Chr1	stalkie_big_nohaplotig	exon	59343622	59343762	100	-	.	Parent=FBgn0036198.1.mrna1;Target=FBgn0036198.1 74 214 +
Chr1	stalkie_big_nohaplotig	exon	59343835	59343907	98	-	.	Parent=FBgn0036198.1.mrna1;Target=FBgn0036198.1 1 73 +
Chr1	stalkie_big_nohaplotig	CDS	59343274	59343557	.	-	2	Parent=FBgn0036198.1.mrna1;Target=FBgn0036198.1 215 498 +
Chr1	stalkie_big_nohaplotig	CDS	59343622	59343762	.	-	2	Parent=FBgn0036198.1.mrna1;Target=FBgn0036198.1 74 214 +
Chr1	stalkie_big_nohaplotig	CDS	59343835	59343907	.	-	0	Parent=FBgn0036198.1.mrna1;Target=FBgn0036198.1 1 73 +
Chr1	gffcl	locus	59344701	59345834	.	+	.	ID=RLOC_00008301;geneIDs=FBgn0036484.1.path1;transcripts=FBgn0036484.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59344701	59345834	.	+	.	ID=FBgn0036484.1.mrna1;geneID=FBgn0036484.1.path1;Name=FBgn0036484.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1133;mismatches=1;indels=0;unknowns=0;Target=FBgn0036484.1 1134 1 .;locus=RLOC_00008301
Chr1	stalkie_big_nohaplotig	exon	59344701	59345834	99	+	.	Parent=FBgn0036484.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	59344701	59345834	.	+	0	Parent=FBgn0036484.1.mrna1
Chr1	gffcl	locus	59362448	59366075	.	+	.	ID=RLOC_00008302;geneIDs=FBgn0036485.1.path1;transcripts=FBgn0036485.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59362448	59366075	.	+	.	ID=FBgn0036485.1.mrna1;geneID=FBgn0036485.1.path1;Name=FBgn0036485.1;Dir=sensecoverage=100.0;identity=99.7;matches=1493;mismatches=4;indels=0;unknowns=0;locus=RLOC_00008302
Chr1	stalkie_big_nohaplotig	exon	59362448	59362539	100	+	.	Parent=FBgn0036485.1.mrna1;Target=FBgn0036485.1 1 92 +
Chr1	stalkie_big_nohaplotig	exon	59362613	59363088	99	+	.	Parent=FBgn0036485.1.mrna1;Target=FBgn0036485.1 93 568 +
Chr1	stalkie_big_nohaplotig	exon	59363193	59363424	100	+	.	Parent=FBgn0036485.1.mrna1;Target=FBgn0036485.1 569 800 +
Chr1	stalkie_big_nohaplotig	exon	59365323	59365506	99	+	.	Parent=FBgn0036485.1.mrna1;Target=FBgn0036485.1 801 984 +
Chr1	stalkie_big_nohaplotig	exon	59365563	59366075	100	+	.	Parent=FBgn0036485.1.mrna1;Target=FBgn0036485.1 985 1497 +
Chr1	stalkie_big_nohaplotig	CDS	59362448	59362539	.	+	0	Parent=FBgn0036485.1.mrna1;Target=FBgn0036485.1 1 92 +
Chr1	stalkie_big_nohaplotig	CDS	59362613	59363088	.	+	1	Parent=FBgn0036485.1.mrna1;Target=FBgn0036485.1 93 568 +
Chr1	stalkie_big_nohaplotig	CDS	59363193	59363424	.	+	2	Parent=FBgn0036485.1.mrna1;Target=FBgn0036485.1 569 800 +
Chr1	stalkie_big_nohaplotig	CDS	59365323	59365506	.	+	1	Parent=FBgn0036485.1.mrna1;Target=FBgn0036485.1 801 984 +
Chr1	stalkie_big_nohaplotig	CDS	59365563	59366075	.	+	0	Parent=FBgn0036485.1.mrna1;Target=FBgn0036485.1 985 1497 +
Chr1	gffcl	locus	59367323	59367973	.	-	.	ID=RLOC_00008303;geneIDs=comp154869_c2_seq1.path1;transcripts=comp154869_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59367323	59367973	.	-	.	ID=comp154869_c2_seq1.mrna1;geneID=comp154869_c2_seq1.path1;Name=comp154869_c2_seq1;Dir=indeterminatecoverage=100.0;identity=89.9;matches=624;mismatches=26;indels=44;unknowns=0;Target=comp154869_c2_seq1 693 1 .;CDS_Target=comp154869_c2_seq1 300 283 .;locus=RLOC_00008303
Chr1	stalkie_big_nohaplotig	exon	59367323	59367973	89	-	.	Parent=comp154869_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	59367699	59367708	.	-	0	Parent=comp154869_c2_seq1.mrna1
Chr1	gffcl	locus	59369614	59370476	.	+	.	ID=RLOC_00008304;geneIDs=comp158396_c0_seq1.path1;transcripts=comp158396_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59369614	59370476	.	+	.	ID=comp158396_c0_seq1.mrna1;geneID=comp158396_c0_seq1.path1;Name=comp158396_c0_seq1;Dir=indeterminatecoverage=99.3;identity=95.6;matches=839;mismatches=21;indels=18;unknowns=0;Target=comp158396_c0_seq1 881 7 .;CDS_Target=comp158396_c0_seq1 409 347 .;locus=RLOC_00008304
Chr1	stalkie_big_nohaplotig	exon	59369614	59370476	95	+	.	Parent=comp158396_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	59369943	59370005	.	+	0	Parent=comp158396_c0_seq1.mrna1
Chr1	gffcl	locus	59383364	59385317	.	+	.	ID=RLOC_00008306;geneIDs=FBgn0036487.1.path1;transcripts=FBgn0036487.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59383364	59385317	.	+	.	ID=FBgn0036487.1.mrna1;geneID=FBgn0036487.1.path1;Name=FBgn0036487.1;Dir=sensecoverage=100.0;identity=99.1;matches=1502;mismatches=13;indels=0;unknowns=0;locus=RLOC_00008306
Chr1	stalkie_big_nohaplotig	exon	59383364	59383721	98	+	.	Parent=FBgn0036487.1.mrna1;Target=FBgn0036487.1 1 358 +
Chr1	stalkie_big_nohaplotig	exon	59383795	59383999	100	+	.	Parent=FBgn0036487.1.mrna1;Target=FBgn0036487.1 359 563 +
Chr1	stalkie_big_nohaplotig	exon	59384131	59384273	100	+	.	Parent=FBgn0036487.1.mrna1;Target=FBgn0036487.1 564 706 +
Chr1	stalkie_big_nohaplotig	exon	59384332	59384443	98	+	.	Parent=FBgn0036487.1.mrna1;Target=FBgn0036487.1 707 818 +
Chr1	stalkie_big_nohaplotig	exon	59384501	59384573	100	+	.	Parent=FBgn0036487.1.mrna1;Target=FBgn0036487.1 819 891 +
Chr1	stalkie_big_nohaplotig	exon	59384636	59384926	98	+	.	Parent=FBgn0036487.1.mrna1;Target=FBgn0036487.1 892 1182 +
Chr1	stalkie_big_nohaplotig	exon	59384985	59385317	99	+	.	Parent=FBgn0036487.1.mrna1;Target=FBgn0036487.1 1183 1515 +
Chr1	stalkie_big_nohaplotig	CDS	59383364	59383721	.	+	0	Parent=FBgn0036487.1.mrna1;Target=FBgn0036487.1 1 358 +
Chr1	stalkie_big_nohaplotig	CDS	59383795	59383999	.	+	2	Parent=FBgn0036487.1.mrna1;Target=FBgn0036487.1 359 563 +
Chr1	stalkie_big_nohaplotig	CDS	59384131	59384273	.	+	1	Parent=FBgn0036487.1.mrna1;Target=FBgn0036487.1 564 706 +
Chr1	stalkie_big_nohaplotig	CDS	59384332	59384443	.	+	2	Parent=FBgn0036487.1.mrna1;Target=FBgn0036487.1 707 818 +
Chr1	stalkie_big_nohaplotig	CDS	59384501	59384573	.	+	1	Parent=FBgn0036487.1.mrna1;Target=FBgn0036487.1 819 891 +
Chr1	stalkie_big_nohaplotig	CDS	59384636	59384926	.	+	0	Parent=FBgn0036487.1.mrna1;Target=FBgn0036487.1 892 1182 +
Chr1	stalkie_big_nohaplotig	CDS	59384985	59385317	.	+	0	Parent=FBgn0036487.1.mrna1;Target=FBgn0036487.1 1183 1515 +
Chr1	gffcl	locus	59387061	59387443	.	+	.	ID=RLOC_00008307;geneIDs=FBgn0036488.1.path1;transcripts=FBgn0036488.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59387061	59387443	.	+	.	ID=FBgn0036488.1.mrna1;geneID=FBgn0036488.1.path1;Name=FBgn0036488.1;Dir=sensecoverage=100.0;identity=100.0;matches=285;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008307
Chr1	stalkie_big_nohaplotig	exon	59387061	59387239	100	+	.	Parent=FBgn0036488.1.mrna1;Target=FBgn0036488.1 1 179 +
Chr1	stalkie_big_nohaplotig	exon	59387338	59387443	100	+	.	Parent=FBgn0036488.1.mrna1;Target=FBgn0036488.1 180 285 +
Chr1	stalkie_big_nohaplotig	CDS	59387061	59387239	.	+	0	Parent=FBgn0036488.1.mrna1;Target=FBgn0036488.1 1 179 +
Chr1	stalkie_big_nohaplotig	CDS	59387338	59387443	.	+	1	Parent=FBgn0036488.1.mrna1;Target=FBgn0036488.1 180 285 +
Chr1	gffcl	locus	59390065	59390547	.	+	.	ID=RLOC_00008308;geneIDs=FBgn0037007.1.path1;transcripts=FBgn0037007.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59390065	59390547	.	+	.	ID=FBgn0037007.1.mrna1;geneID=FBgn0037007.1.path1;Name=FBgn0037007.1;Dir=sensecoverage=31.1;identity=95.5;matches=236;mismatches=2;indels=9;unknowns=0;locus=RLOC_00008308
Chr1	stalkie_big_nohaplotig	exon	59390065	59390228	93	+	.	Parent=FBgn0037007.1.mrna1;Target=FBgn0037007.1 1 173 +
Chr1	stalkie_big_nohaplotig	exon	59390474	59390547	100	+	.	Parent=FBgn0037007.1.mrna1;Target=FBgn0037007.1 174 247 +
Chr1	stalkie_big_nohaplotig	CDS	59390065	59390228	.	+	0	Parent=FBgn0037007.1.mrna1;Target=FBgn0037007.1 1 173 +
Chr1	stalkie_big_nohaplotig	CDS	59390474	59390547	.	+	1	Parent=FBgn0037007.1.mrna1;Target=FBgn0037007.1 174 247 +
Chr1	gffcl	locus	59408957	59409315	.	-	.	ID=RLOC_00008309;geneIDs=comp149947_c1_seq1.path2;transcripts=comp149947_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	59408957	59409315	.	-	.	ID=comp149947_c1_seq1.mrna2;geneID=comp149947_c1_seq1.path2;Name=comp149947_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=355;mismatches=4;indels=0;unknowns=0;Target=comp149947_c1_seq1 359 1 .;CDS_Target=comp149947_c1_seq1 359 3 .;locus=RLOC_00008309
Chr1	stalkie_big_nohaplotig	exon	59408957	59409315	98	-	.	Parent=comp149947_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	59408957	59409313	.	-	0	Parent=comp149947_c1_seq1.mrna2
Chr1	gffcl	locus	59412533	59413689	.	-	.	ID=RLOC_00008310;geneIDs=FBgn0037017.1.path1;transcripts=FBgn0037017.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59412533	59413689	.	-	.	ID=FBgn0037017.1.mrna1;geneID=FBgn0037017.1.path1;Name=FBgn0037017.1;Dir=sensecoverage=100.0;identity=99.7;matches=960;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008310
Chr1	stalkie_big_nohaplotig	exon	59412533	59412648	100	-	.	Parent=FBgn0037017.1.mrna1;Target=FBgn0037017.1 848 963 +
Chr1	stalkie_big_nohaplotig	exon	59412706	59412928	99	-	.	Parent=FBgn0037017.1.mrna1;Target=FBgn0037017.1 625 847 +
Chr1	stalkie_big_nohaplotig	exon	59412990	59413529	99	-	.	Parent=FBgn0037017.1.mrna1;Target=FBgn0037017.1 85 624 +
Chr1	stalkie_big_nohaplotig	exon	59413606	59413689	100	-	.	Parent=FBgn0037017.1.mrna1;Target=FBgn0037017.1 1 84 +
Chr1	stalkie_big_nohaplotig	CDS	59412533	59412648	.	-	2	Parent=FBgn0037017.1.mrna1;Target=FBgn0037017.1 848 963 +
Chr1	stalkie_big_nohaplotig	CDS	59412706	59412928	.	-	0	Parent=FBgn0037017.1.mrna1;Target=FBgn0037017.1 625 847 +
Chr1	stalkie_big_nohaplotig	CDS	59412990	59413529	.	-	0	Parent=FBgn0037017.1.mrna1;Target=FBgn0037017.1 85 624 +
Chr1	stalkie_big_nohaplotig	CDS	59413606	59413689	.	-	0	Parent=FBgn0037017.1.mrna1;Target=FBgn0037017.1 1 84 +
Chr1	gffcl	locus	59413780	59414190	.	+	.	ID=RLOC_00008311;geneIDs=FBgn0040634.1.path1;transcripts=FBgn0040634.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59413780	59414190	.	+	.	ID=FBgn0040634.1.mrna1;geneID=FBgn0040634.1.path1;Name=FBgn0040634.1;Dir=sensecoverage=100.0;identity=98.7;matches=305;mismatches=3;indels=1;unknowns=0;locus=RLOC_00008311
Chr1	stalkie_big_nohaplotig	exon	59413780	59413877	95	+	.	Parent=FBgn0040634.1.mrna1;Target=FBgn0040634.1 1 99 +
Chr1	stalkie_big_nohaplotig	exon	59413930	59414028	100	+	.	Parent=FBgn0040634.1.mrna1;Target=FBgn0040634.1 100 198 +
Chr1	stalkie_big_nohaplotig	exon	59414080	59414190	100	+	.	Parent=FBgn0040634.1.mrna1;Target=FBgn0040634.1 199 309 +
Chr1	stalkie_big_nohaplotig	CDS	59413833	59413877	.	+	0	Parent=FBgn0040634.1.mrna1;Target=FBgn0040634.1 55 99 +
Chr1	stalkie_big_nohaplotig	CDS	59413930	59414028	.	+	0	Parent=FBgn0040634.1.mrna1;Target=FBgn0040634.1 100 198 +
Chr1	stalkie_big_nohaplotig	CDS	59414080	59414190	.	+	0	Parent=FBgn0040634.1.mrna1;Target=FBgn0040634.1 199 309 +
Chr1	gffcl	locus	59414282	59415145	.	-	.	ID=RLOC_00008312;geneIDs=FBgn0037018.1.path1;transcripts=FBgn0037018.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59414282	59415145	.	-	.	ID=FBgn0037018.1.mrna1;geneID=FBgn0037018.1.path1;Name=FBgn0037018.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=858;mismatches=6;indels=0;unknowns=0;Target=FBgn0037018.1 864 1 .;locus=RLOC_00008312
Chr1	stalkie_big_nohaplotig	exon	59414282	59415145	99	-	.	Parent=FBgn0037018.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	59414282	59415145	.	-	0	Parent=FBgn0037018.1.mrna1
Chr1	gffcl	locus	59430271	59431400	.	-	.	ID=RLOC_00008314;geneIDs=FBgn0037019.1.path1;transcripts=FBgn0037019.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59430271	59431400	.	-	.	ID=FBgn0037019.1.mrna1;geneID=FBgn0037019.1.path1;Name=FBgn0037019.1;Dir=sensecoverage=100.0;identity=99.4;matches=1065;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008314
Chr1	stalkie_big_nohaplotig	exon	59430271	59431211	99	-	.	Parent=FBgn0037019.1.mrna1;Target=FBgn0037019.1 131 1071 +
Chr1	stalkie_big_nohaplotig	exon	59431271	59431400	100	-	.	Parent=FBgn0037019.1.mrna1;Target=FBgn0037019.1 1 130 +
Chr1	stalkie_big_nohaplotig	CDS	59430271	59431211	.	-	2	Parent=FBgn0037019.1.mrna1;Target=FBgn0037019.1 131 1071 +
Chr1	stalkie_big_nohaplotig	CDS	59431271	59431400	.	-	0	Parent=FBgn0037019.1.mrna1;Target=FBgn0037019.1 1 130 +
Chr1	gffcl	locus	59433270	59447692	.	+	.	ID=RLOC_00008315;geneIDs=FBgn0037010.1.path1;transcripts=FBgn0037010.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59433270	59447692	.	+	.	ID=FBgn0037010.1.mrna1;geneID=FBgn0037010.1.path1;Name=FBgn0037010.1;Dir=sensecoverage=100.0;identity=99.2;matches=1479;mismatches=12;indels=0;unknowns=0;locus=RLOC_00008315
Chr1	stalkie_big_nohaplotig	exon	59433270	59433577	99	+	.	Parent=FBgn0037010.1.mrna1;Target=FBgn0037010.1 1 308 +
Chr1	stalkie_big_nohaplotig	exon	59442999	59443257	99	+	.	Parent=FBgn0037010.1.mrna1;Target=FBgn0037010.1 309 567 +
Chr1	stalkie_big_nohaplotig	exon	59443327	59443779	99	+	.	Parent=FBgn0037010.1.mrna1;Target=FBgn0037010.1 568 1020 +
Chr1	stalkie_big_nohaplotig	exon	59443887	59443999	100	+	.	Parent=FBgn0037010.1.mrna1;Target=FBgn0037010.1 1021 1133 +
Chr1	stalkie_big_nohaplotig	exon	59444073	59444283	99	+	.	Parent=FBgn0037010.1.mrna1;Target=FBgn0037010.1 1134 1344 +
Chr1	stalkie_big_nohaplotig	exon	59444355	59444451	95	+	.	Parent=FBgn0037010.1.mrna1;Target=FBgn0037010.1 1345 1441 +
Chr1	stalkie_big_nohaplotig	exon	59447643	59447692	100	+	.	Parent=FBgn0037010.1.mrna1;Target=FBgn0037010.1 1442 1491 +
Chr1	stalkie_big_nohaplotig	CDS	59433270	59433577	.	+	0	Parent=FBgn0037010.1.mrna1;Target=FBgn0037010.1 1 308 +
Chr1	stalkie_big_nohaplotig	CDS	59442999	59443257	.	+	1	Parent=FBgn0037010.1.mrna1;Target=FBgn0037010.1 309 567 +
Chr1	stalkie_big_nohaplotig	CDS	59443327	59443779	.	+	0	Parent=FBgn0037010.1.mrna1;Target=FBgn0037010.1 568 1020 +
Chr1	stalkie_big_nohaplotig	CDS	59443887	59443999	.	+	0	Parent=FBgn0037010.1.mrna1;Target=FBgn0037010.1 1021 1133 +
Chr1	stalkie_big_nohaplotig	CDS	59444073	59444283	.	+	1	Parent=FBgn0037010.1.mrna1;Target=FBgn0037010.1 1134 1344 +
Chr1	stalkie_big_nohaplotig	CDS	59444355	59444451	.	+	0	Parent=FBgn0037010.1.mrna1;Target=FBgn0037010.1 1345 1441 +
Chr1	stalkie_big_nohaplotig	CDS	59447643	59447692	.	+	2	Parent=FBgn0037010.1.mrna1;Target=FBgn0037010.1 1442 1491 +
Chr1	gffcl	locus	59446882	59447489	.	+	.	ID=RLOC_00008316;geneIDs=comp155852_c0_seq1.path1;transcripts=comp155852_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59446882	59447489	.	+	.	ID=comp155852_c0_seq1.mrna1;geneID=comp155852_c0_seq1.path1;Name=comp155852_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.9;matches=588;mismatches=19;indels=6;unknowns=0;Target=comp155852_c0_seq1 612 1 .;CDS_Target=comp155852_c0_seq1 207 1 .;locus=RLOC_00008316
Chr1	stalkie_big_nohaplotig	exon	59446882	59447489	95	+	.	Parent=comp155852_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	59446882	59447089	.	+	0	Parent=comp155852_c0_seq1.mrna1
Chr1	gffcl	locus	59449337	59450408	.	-	.	ID=RLOC_00008317;geneIDs=FBgn0037009.1.path1;transcripts=FBgn0037009.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59449337	59450408	.	-	.	ID=FBgn0037009.1.mrna1;geneID=FBgn0037009.1.path1;Name=FBgn0037009.1;Dir=sensecoverage=100.0;identity=99.2;matches=494;mismatches=4;indels=0;unknowns=0;locus=RLOC_00008317
Chr1	stalkie_big_nohaplotig	exon	59449337	59449465	98	-	.	Parent=FBgn0037009.1.mrna1;Target=FBgn0037009.1 370 498 +
Chr1	stalkie_big_nohaplotig	exon	59449528	59449645	99	-	.	Parent=FBgn0037009.1.mrna1;Target=FBgn0037009.1 252 369 +
Chr1	stalkie_big_nohaplotig	exon	59449716	59449885	99	-	.	Parent=FBgn0037009.1.mrna1;Target=FBgn0037009.1 82 251 +
Chr1	stalkie_big_nohaplotig	exon	59450328	59450408	100	-	.	Parent=FBgn0037009.1.mrna1;Target=FBgn0037009.1 1 81 +
Chr1	stalkie_big_nohaplotig	CDS	59449337	59449465	.	-	0	Parent=FBgn0037009.1.mrna1;Target=FBgn0037009.1 370 498 +
Chr1	stalkie_big_nohaplotig	CDS	59449528	59449645	.	-	1	Parent=FBgn0037009.1.mrna1;Target=FBgn0037009.1 252 369 +
Chr1	stalkie_big_nohaplotig	CDS	59449716	59449885	.	-	0	Parent=FBgn0037009.1.mrna1;Target=FBgn0037009.1 82 251 +
Chr1	stalkie_big_nohaplotig	CDS	59450328	59450408	.	-	0	Parent=FBgn0037009.1.mrna1;Target=FBgn0037009.1 1 81 +
Chr1	gffcl	locus	59451692	59452881	.	+	.	ID=RLOC_00008318;geneIDs=FBgn0037008.1.path1;transcripts=FBgn0037008.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59451692	59452881	.	+	.	ID=FBgn0037008.1.mrna1;geneID=FBgn0037008.1.path1;Name=FBgn0037008.1;Dir=sensecoverage=100.0;identity=98.7;matches=1119;mismatches=15;indels=0;unknowns=0;locus=RLOC_00008318
Chr1	stalkie_big_nohaplotig	exon	59451692	59452550	98	+	.	Parent=FBgn0037008.1.mrna1;Target=FBgn0037008.1 1 859 +
Chr1	stalkie_big_nohaplotig	exon	59452607	59452881	99	+	.	Parent=FBgn0037008.1.mrna1;Target=FBgn0037008.1 860 1134 +
Chr1	stalkie_big_nohaplotig	CDS	59451692	59452550	.	+	0	Parent=FBgn0037008.1.mrna1;Target=FBgn0037008.1 1 859 +
Chr1	stalkie_big_nohaplotig	CDS	59452607	59452881	.	+	2	Parent=FBgn0037008.1.mrna1;Target=FBgn0037008.1 860 1134 +
Chr1	gffcl	locus	59453896	59456425	.	-	.	ID=RLOC_00008319;geneIDs=FBgn0037007.1.path2;transcripts=FBgn0037007.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	59453896	59456425	.	-	.	ID=FBgn0037007.1.mrna2;geneID=FBgn0037007.1.path2;Name=FBgn0037007.1;Dir=sensecoverage=68.9;identity=99.3;matches=544;mismatches=4;indels=0;unknowns=0;locus=RLOC_00008319
Chr1	stalkie_big_nohaplotig	exon	59453896	59453944	100	-	.	Parent=FBgn0037007.1.mrna2;Target=FBgn0037007.1 747 795 +
Chr1	stalkie_big_nohaplotig	exon	59454003	59454158	100	-	.	Parent=FBgn0037007.1.mrna2;Target=FBgn0037007.1 591 746 +
Chr1	stalkie_big_nohaplotig	exon	59455947	59456017	100	-	.	Parent=FBgn0037007.1.mrna2;Target=FBgn0037007.1 520 590 +
Chr1	stalkie_big_nohaplotig	exon	59456076	59456160	98	-	.	Parent=FBgn0037007.1.mrna2;Target=FBgn0037007.1 435 519 +
Chr1	stalkie_big_nohaplotig	exon	59456239	59456425	98	-	.	Parent=FBgn0037007.1.mrna2;Target=FBgn0037007.1 248 434 +
Chr1	stalkie_big_nohaplotig	CDS	59453896	59453944	.	-	0	Parent=FBgn0037007.1.mrna2;Target=FBgn0037007.1 747 795 +
Chr1	stalkie_big_nohaplotig	CDS	59454003	59454158	.	-	0	Parent=FBgn0037007.1.mrna2;Target=FBgn0037007.1 591 746 +
Chr1	stalkie_big_nohaplotig	CDS	59455947	59456017	.	-	2	Parent=FBgn0037007.1.mrna2;Target=FBgn0037007.1 520 590 +
Chr1	stalkie_big_nohaplotig	CDS	59456076	59456160	.	-	0	Parent=FBgn0037007.1.mrna2;Target=FBgn0037007.1 435 519 +
Chr1	stalkie_big_nohaplotig	CDS	59456239	59456425	.	-	1	Parent=FBgn0037007.1.mrna2;Target=FBgn0037007.1 248 434 +
Chr1	gffcl	locus	59487080	59488339	.	-	.	ID=RLOC_00008320;geneIDs=FBgn0039711.2.path5;transcripts=FBgn0039711.2.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	59487080	59488339	.	-	.	ID=FBgn0039711.2.mrna5;geneID=FBgn0039711.2.path5;Name=FBgn0039711.2;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1255;mismatches=5;indels=0;unknowns=0;Target=FBgn0039711.2 1260 1 .;CDS_Target=FBgn0039711.2 1260 514 .;locus=RLOC_00008320
Chr1	stalkie_big_nohaplotig	exon	59487080	59488339	99	-	.	Parent=FBgn0039711.2.mrna5
Chr1	stalkie_big_nohaplotig	CDS	59487080	59487826	.	-	0	Parent=FBgn0039711.2.mrna5
Chr1	gffcl	locus	59509079	59512536	.	-	.	ID=RLOC_00008321;geneIDs=FBgn0031644.2.path1;transcripts=FBgn0031644.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59509079	59512536	.	-	.	ID=FBgn0031644.2.mrna1;geneID=FBgn0031644.2.path1;Name=FBgn0031644.2;Dir=sensecoverage=100.0;identity=98.9;matches=1242;mismatches=9;indels=5;unknowns=0;locus=RLOC_00008321
Chr1	stalkie_big_nohaplotig	exon	59509079	59509915	99	-	.	Parent=FBgn0031644.2.mrna1;Target=FBgn0031644.2 415 1251 +
Chr1	stalkie_big_nohaplotig	exon	59512118	59512536	98	-	.	Parent=FBgn0031644.2.mrna1;Target=FBgn0031644.2 1 414 +
Chr1	stalkie_big_nohaplotig	CDS	59509079	59509915	.	-	0	Parent=FBgn0031644.2.mrna1;Target=FBgn0031644.2 415 1251 +
Chr1	stalkie_big_nohaplotig	CDS	59512118	59512432	.	-	0	Parent=FBgn0031644.2.mrna1;Target=FBgn0031644.2 100 414 +
Chr1	gffcl	locus	59589362	59648910	.	-	.	ID=RLOC_00008322;geneIDs=FBgn0037016.1.path1;transcripts=FBgn0037016.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59589362	59648910	.	-	.	ID=FBgn0037016.1.mrna1;geneID=FBgn0037016.1.path1;Name=FBgn0037016.1;Dir=sensecoverage=100.0;identity=99.4;matches=1262;mismatches=7;indels=0;unknowns=0;locus=RLOC_00008322
Chr1	stalkie_big_nohaplotig	exon	59589362	59590485	99	-	.	Parent=FBgn0037016.1.mrna1;Target=FBgn0037016.1 146 1269 +
Chr1	stalkie_big_nohaplotig	exon	59648766	59648910	99	-	.	Parent=FBgn0037016.1.mrna1;Target=FBgn0037016.1 1 145 +
Chr1	stalkie_big_nohaplotig	CDS	59589362	59590485	.	-	2	Parent=FBgn0037016.1.mrna1;Target=FBgn0037016.1 146 1269 +
Chr1	stalkie_big_nohaplotig	CDS	59648766	59648910	.	-	0	Parent=FBgn0037016.1.mrna1;Target=FBgn0037016.1 1 145 +
Chr1	gffcl	locus	59673513	59674157	.	+	.	ID=RLOC_00008323;geneIDs=comp116587_c0_seq1.path1;transcripts=comp116587_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59673513	59674157	.	+	.	ID=comp116587_c0_seq1.mrna1;geneID=comp116587_c0_seq1.path1;Name=comp116587_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=642;mismatches=3;indels=0;unknowns=0;Target=comp116587_c0_seq1 645 1 .;CDS_Target=comp116587_c0_seq1 313 2 .;locus=RLOC_00008323
Chr1	stalkie_big_nohaplotig	exon	59673513	59674157	99	+	.	Parent=comp116587_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	59673514	59673825	.	+	0	Parent=comp116587_c0_seq1.mrna1
Chr1	gffcl	locus	59704410	59704858	.	-	.	ID=RLOC_00008324;geneIDs=comp144073_c0_seq1.path4;transcripts=comp144073_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	59704410	59704858	.	-	.	ID=comp144073_c0_seq1.mrna4;geneID=comp144073_c0_seq1.path4;Name=comp144073_c0_seq1;Dir=sensecoverage=84.9;identity=98.4;matches=315;mismatches=5;indels=0;unknowns=0;locus=RLOC_00008324
Chr1	stalkie_big_nohaplotig	exon	59704410	59704593	100	-	.	Parent=comp144073_c0_seq1.mrna4;Target=comp144073_c0_seq1 137 320 +
Chr1	stalkie_big_nohaplotig	exon	59704654	59704726	98	-	.	Parent=comp144073_c0_seq1.mrna4;Target=comp144073_c0_seq1 64 136 +
Chr1	stalkie_big_nohaplotig	exon	59704796	59704858	93	-	.	Parent=comp144073_c0_seq1.mrna4;Target=comp144073_c0_seq1 1 63 +
Chr1	stalkie_big_nohaplotig	CDS	59704499	59704593	.	-	2	Parent=comp144073_c0_seq1.mrna4;Target=comp144073_c0_seq1 137 231 +
Chr1	stalkie_big_nohaplotig	CDS	59704654	59704726	.	-	0	Parent=comp144073_c0_seq1.mrna4;Target=comp144073_c0_seq1 64 136 +
Chr1	gffcl	locus	59745763	59746675	.	-	.	ID=RLOC_00008325;geneIDs=comp1355332_c0_seq1.path1;transcripts=comp1355332_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59745763	59746675	.	-	.	ID=comp1355332_c0_seq1.mrna1;geneID=comp1355332_c0_seq1.path1;Name=comp1355332_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=911;mismatches=2;indels=0;unknowns=0;Target=comp1355332_c0_seq1 913 1 .;CDS_Target=comp1355332_c0_seq1 825 622 .;locus=RLOC_00008325
Chr1	stalkie_big_nohaplotig	exon	59745763	59746675	99	-	.	Parent=comp1355332_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	59745851	59746054	.	-	0	Parent=comp1355332_c0_seq1.mrna1
Chr1	gffcl	locus	59753632	59754610	.	-	.	ID=RLOC_00008326;geneIDs=FBgn0015828.2.path1;transcripts=FBgn0015828.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59753632	59754610	.	-	.	ID=FBgn0015828.2.mrna1;geneID=FBgn0015828.2.path1;Name=FBgn0015828.2;Dir=sensecoverage=100.0;identity=97.8;matches=848;mismatches=16;indels=3;unknowns=0;locus=RLOC_00008326
Chr1	stalkie_big_nohaplotig	exon	59753632	59753810	97	-	.	Parent=FBgn0015828.2.mrna1;Target=FBgn0015828.2 686 864 +
Chr1	stalkie_big_nohaplotig	exon	59753869	59754308	97	-	.	Parent=FBgn0015828.2.mrna1;Target=FBgn0015828.2 249 685 +
Chr1	stalkie_big_nohaplotig	exon	59754363	59754610	99	-	.	Parent=FBgn0015828.2.mrna1;Target=FBgn0015828.2 1 248 +
Chr1	stalkie_big_nohaplotig	CDS	59753632	59753810	.	-	2	Parent=FBgn0015828.2.mrna1;Target=FBgn0015828.2 686 864 +
Chr1	stalkie_big_nohaplotig	CDS	59753869	59754308	.	-	1	Parent=FBgn0015828.2.mrna1;Target=FBgn0015828.2 249 685 +
Chr1	stalkie_big_nohaplotig	CDS	59754363	59754610	.	-	0	Parent=FBgn0015828.2.mrna1;Target=FBgn0015828.2 1 248 +
Chr1	gffcl	locus	59777269	59782663	.	+	.	ID=RLOC_00008327;geneIDs=comp163730_c1_seq1.path1;transcripts=comp163730_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59777269	59782663	.	+	.	ID=comp163730_c1_seq1.mrna1;geneID=comp163730_c1_seq1.path1;Name=comp163730_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=5355;mismatches=37;indels=3;unknowns=0;Target=comp163730_c1_seq1 5392 1 .;CDS_Target=comp163730_c1_seq1 5390 276 .;locus=RLOC_00008327
Chr1	stalkie_big_nohaplotig	exon	59777269	59782663	99	+	.	Parent=comp163730_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	59777544	59782661	.	+	0	Parent=comp163730_c1_seq1.mrna1
Chr1	gffcl	locus	59796976	59797447	.	-	.	ID=RLOC_00008328;geneIDs=comp114431_c0_seq1.path1;transcripts=comp114431_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59796976	59797447	.	-	.	ID=comp114431_c0_seq1.mrna1;geneID=comp114431_c0_seq1.path1;Name=comp114431_c0_seq1;Dir=sensecoverage=88.5;identity=98.5;matches=386;mismatches=2;indels=4;unknowns=0;Target=comp114431_c0_seq1 75 278 +;locus=RLOC_00008328
Chr1	stalkie_big_nohaplotig	exon	59796976	59797121	99	-	.	Parent=comp114431_c0_seq1.mrna1;Target=comp114431_c0_seq1 298 443 +
Chr1	stalkie_big_nohaplotig	exon	59797206	59797447	97	-	.	Parent=comp114431_c0_seq1.mrna1;Target=comp114431_c0_seq1 52 297 +
Chr1	stalkie_big_nohaplotig	CDS	59797225	59797424	.	-	0	Parent=comp114431_c0_seq1.mrna1
Chr1	gffcl	locus	59832144	59832426	.	-	.	ID=RLOC_00008329;geneIDs=comp78470_c0_seq1.path2;transcripts=comp78470_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	59832144	59832426	.	-	.	ID=comp78470_c0_seq1.mrna2;geneID=comp78470_c0_seq1.path2;Name=comp78470_c0_seq1;Dir=indeterminatecoverage=84.5;identity=88.6;matches=256;mismatches=26;indels=7;unknowns=0;Target=comp78470_c0_seq1 341 54 .;CDS_Target=comp78470_c0_seq1 117 54 .;locus=RLOC_00008329
Chr1	stalkie_big_nohaplotig	exon	59832144	59832426	88	-	.	Parent=comp78470_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	59832368	59832426	.	-	2	Parent=comp78470_c0_seq1.mrna2
Chr1	gffcl	locus	59861334	59861990	.	-	.	ID=RLOC_00008330;geneIDs=comp150806_c0_seq1.path1;transcripts=comp150806_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59861334	59861990	.	-	.	ID=comp150806_c0_seq1.mrna1;geneID=comp150806_c0_seq1.path1;Name=comp150806_c0_seq1;Dir=sensecoverage=89.7;identity=94.9;matches=564;mismatches=2;indels=28;unknowns=0;locus=RLOC_00008330
Chr1	stalkie_big_nohaplotig	exon	59861334	59861580	89	-	.	Parent=comp150806_c0_seq1.mrna1;Target=comp150806_c0_seq1 371 645 +
Chr1	stalkie_big_nohaplotig	exon	59861672	59861990	99	-	.	Parent=comp150806_c0_seq1.mrna1;Target=comp150806_c0_seq1 52 370 +
Chr1	stalkie_big_nohaplotig	CDS	59861530	59861580	.	-	0	Parent=comp150806_c0_seq1.mrna1;Target=comp150806_c0_seq1 371 421 +
Chr1	stalkie_big_nohaplotig	CDS	59861672	59861884	.	-	0	Parent=comp150806_c0_seq1.mrna1;Target=comp150806_c0_seq1 158 370 +
Chr1	gffcl	locus	59874024	59897551	.	+	.	ID=RLOC_00008331;geneIDs=FBgn0037015.1.path1;transcripts=FBgn0037015.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59874024	59897551	.	+	.	ID=FBgn0037015.1.mrna1;geneID=FBgn0037015.1.path1;Name=FBgn0037015.1;Dir=sensecoverage=97.8;identity=99.9;matches=721;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008331
Chr1	stalkie_big_nohaplotig	exon	59874024	59874286	100	+	.	Parent=FBgn0037015.1.mrna1;Target=FBgn0037015.1 1 263 +
Chr1	stalkie_big_nohaplotig	exon	59874356	59874486	99	+	.	Parent=FBgn0037015.1.mrna1;Target=FBgn0037015.1 264 394 +
Chr1	stalkie_big_nohaplotig	exon	59895760	59895959	100	+	.	Parent=FBgn0037015.1.mrna1;Target=FBgn0037015.1 395 594 +
Chr1	stalkie_big_nohaplotig	exon	59897424	59897551	100	+	.	Parent=FBgn0037015.1.mrna1;Target=FBgn0037015.1 595 722 +
Chr1	stalkie_big_nohaplotig	CDS	59874024	59874286	.	+	0	Parent=FBgn0037015.1.mrna1;Target=FBgn0037015.1 1 263 +
Chr1	stalkie_big_nohaplotig	CDS	59874356	59874486	.	+	1	Parent=FBgn0037015.1.mrna1;Target=FBgn0037015.1 264 394 +
Chr1	stalkie_big_nohaplotig	CDS	59895760	59895959	.	+	2	Parent=FBgn0037015.1.mrna1;Target=FBgn0037015.1 395 594 +
Chr1	stalkie_big_nohaplotig	CDS	59897424	59897549	.	+	0	Parent=FBgn0037015.1.mrna1;Target=FBgn0037015.1 595 720 +
Chr1	gffcl	locus	59961291	60157958	.	+	.	ID=RLOC_00008332;geneIDs=Dv_FBgn0200996.1.path1;transcripts=Dv_FBgn0200996.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	59961291	60157958	.	+	.	ID=Dv_FBgn0200996.1.mrna1;geneID=Dv_FBgn0200996.1.path1;Name=Dv_FBgn0200996.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=2072;mismatches=16;indels=0;unknowns=0;locus=RLOC_00008332
Chr1	stalkie_big_nohaplotig	exon	59961291	59961450	98	+	.	Parent=Dv_FBgn0200996.1.mrna1;Target=Dv_FBgn0200996.1 160 1 .
Chr1	stalkie_big_nohaplotig	exon	60156031	60157958	99	+	.	Parent=Dv_FBgn0200996.1.mrna1;Target=Dv_FBgn0200996.1 2088 161 .
Chr1	stalkie_big_nohaplotig	CDS	59961291	59961450	.	+	0	Parent=Dv_FBgn0200996.1.mrna1;Target=Dv_FBgn0200996.1 160 1 .
Chr1	stalkie_big_nohaplotig	CDS	60156031	60157958	.	+	2	Parent=Dv_FBgn0200996.1.mrna1;Target=Dv_FBgn0200996.1 2088 161 .
Chr1	gffcl	locus	60007962	60008516	.	-	.	ID=RLOC_00008333;geneIDs=FBgn0037013.1.path1;transcripts=FBgn0037013.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60007962	60008516	.	-	.	ID=FBgn0037013.1.mrna1;geneID=FBgn0037013.1.path1;Name=FBgn0037013.1;Dir=sensecoverage=99.0;identity=99.4;matches=490;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008333
Chr1	stalkie_big_nohaplotig	exon	60007962	60008123	100	-	.	Parent=FBgn0037013.1.mrna1;Target=FBgn0037013.1 337 498 +
Chr1	stalkie_big_nohaplotig	exon	60008186	60008516	99	-	.	Parent=FBgn0037013.1.mrna1;Target=FBgn0037013.1 6 336 +
Chr1	stalkie_big_nohaplotig	CDS	60007962	60008123	.	-	0	Parent=FBgn0037013.1.mrna1;Target=FBgn0037013.1 337 498 +
Chr1	stalkie_big_nohaplotig	CDS	60008186	60008515	.	-	0	Parent=FBgn0037013.1.mrna1;Target=FBgn0037013.1 7 336 +
Chr1	gffcl	locus	60061073	60061902	.	+	.	ID=RLOC_00008334;geneIDs=comp153200_c0_seq1.path1;transcripts=comp153200_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60061073	60061902	.	+	.	ID=comp153200_c0_seq1.mrna1;geneID=comp153200_c0_seq1.path1;Name=comp153200_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.9;matches=829;mismatches=1;indels=0;unknowns=0;Target=comp153200_c0_seq1 830 1 .;CDS_Target=comp153200_c0_seq1 600 475 .;locus=RLOC_00008334
Chr1	stalkie_big_nohaplotig	exon	60061073	60061902	99	+	.	Parent=comp153200_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	60061547	60061672	.	+	0	Parent=comp153200_c0_seq1.mrna1
Chr1	gffcl	locus	60136813	60138533	.	-	.	ID=RLOC_00008335;geneIDs=FBgn0010382.2.path1;transcripts=FBgn0010382.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60136813	60138533	.	-	.	ID=FBgn0010382.2.mrna1;geneID=FBgn0010382.2.path1;Name=FBgn0010382.2;Dir=sensecoverage=100.0;identity=99.2;matches=1565;mismatches=13;indels=0;unknowns=0;locus=RLOC_00008335
Chr1	stalkie_big_nohaplotig	exon	60136813	60137022	100	-	.	Parent=FBgn0010382.2.mrna1;Target=FBgn0010382.2 1369 1578 +
Chr1	stalkie_big_nohaplotig	exon	60137108	60137306	98	-	.	Parent=FBgn0010382.2.mrna1;Target=FBgn0010382.2 1170 1368 +
Chr1	stalkie_big_nohaplotig	exon	60137365	60138533	99	-	.	Parent=FBgn0010382.2.mrna1;Target=FBgn0010382.2 1 1169 +
Chr1	stalkie_big_nohaplotig	CDS	60136813	60137022	.	-	0	Parent=FBgn0010382.2.mrna1;Target=FBgn0010382.2 1369 1578 +
Chr1	stalkie_big_nohaplotig	CDS	60137108	60137306	.	-	1	Parent=FBgn0010382.2.mrna1;Target=FBgn0010382.2 1170 1368 +
Chr1	stalkie_big_nohaplotig	CDS	60137365	60138533	.	-	0	Parent=FBgn0010382.2.mrna1;Target=FBgn0010382.2 1 1169 +
Chr1	gffcl	locus	60172892	60174450	.	.	.	ID=RLOC_00008337;geneIDs=FBgn0037024.1.path1,comp146679_c0_seq1.path1;transcripts=FBgn0037024.1.mrna1,comp146679_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60172892	60174450	.	-	.	ID=FBgn0037024.1.mrna1;geneID=FBgn0037024.1.path1;Name=FBgn0037024.1;Dir=sensecoverage=100.0;identity=100.0;matches=936;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008337
Chr1	stalkie_big_nohaplotig	exon	60172892	60173611	100	-	.	Parent=FBgn0037024.1.mrna1;Target=FBgn0037024.1 217 936 +
Chr1	stalkie_big_nohaplotig	exon	60173685	60173800	100	-	.	Parent=FBgn0037024.1.mrna1;Target=FBgn0037024.1 101 216 +
Chr1	stalkie_big_nohaplotig	exon	60174351	60174450	100	-	.	Parent=FBgn0037024.1.mrna1;Target=FBgn0037024.1 1 100 +
Chr1	stalkie_big_nohaplotig	CDS	60172892	60173611	.	-	0	Parent=FBgn0037024.1.mrna1;Target=FBgn0037024.1 217 936 +
Chr1	stalkie_big_nohaplotig	CDS	60173685	60173800	.	-	2	Parent=FBgn0037024.1.mrna1;Target=FBgn0037024.1 101 216 +
Chr1	stalkie_big_nohaplotig	CDS	60174351	60174450	.	-	0	Parent=FBgn0037024.1.mrna1;Target=FBgn0037024.1 1 100 +
Chr1	stalkie_big_nohaplotig	mRNA	60173754	60173989	.	+	.	ID=comp146679_c0_seq1.mrna1;geneID=comp146679_c0_seq1.path1;Name=comp146679_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=234;mismatches=2;indels=0;unknowns=0;Target=comp146679_c0_seq1 236 1 .;CDS_Target=comp146679_c0_seq1 139 2 .;locus=RLOC_00008337
Chr1	stalkie_big_nohaplotig	exon	60173754	60173989	99	+	.	Parent=comp146679_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	60173755	60173892	.	+	0	Parent=comp146679_c0_seq1.mrna1
Chr1	gffcl	locus	60176266	60177357	.	+	.	ID=RLOC_00008338;geneIDs=FBgn0037023.1.path1;transcripts=FBgn0037023.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60176266	60177357	.	+	.	ID=FBgn0037023.1.mrna1;geneID=FBgn0037023.1.path1;Name=FBgn0037023.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1087;mismatches=5;indels=0;unknowns=0;Target=FBgn0037023.1 1092 1 .;locus=RLOC_00008338
Chr1	stalkie_big_nohaplotig	exon	60176266	60177357	99	+	.	Parent=FBgn0037023.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	60176266	60177357	.	+	0	Parent=FBgn0037023.1.mrna1
Chr1	gffcl	locus	60202710	60212190	.	+	.	ID=RLOC_00008339;geneIDs=FBgn0027364.1.path1;transcripts=FBgn0027364.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60202710	60212190	.	+	.	ID=FBgn0027364.1.mrna1;geneID=FBgn0027364.1.path1;Name=FBgn0027364.1;Dir=sensecoverage=100.0;identity=99.0;matches=1138;mismatches=11;indels=0;unknowns=0;locus=RLOC_00008339
Chr1	stalkie_big_nohaplotig	exon	60202710	60202869	100	+	.	Parent=FBgn0027364.1.mrna1;Target=FBgn0027364.1 1 160 +
Chr1	stalkie_big_nohaplotig	exon	60207321	60207688	98	+	.	Parent=FBgn0027364.1.mrna1;Target=FBgn0027364.1 161 528 +
Chr1	stalkie_big_nohaplotig	exon	60207764	60208281	98	+	.	Parent=FBgn0027364.1.mrna1;Target=FBgn0027364.1 529 1046 +
Chr1	stalkie_big_nohaplotig	exon	60212088	60212190	100	+	.	Parent=FBgn0027364.1.mrna1;Target=FBgn0027364.1 1047 1149 +
Chr1	stalkie_big_nohaplotig	CDS	60202710	60202869	.	+	0	Parent=FBgn0027364.1.mrna1;Target=FBgn0027364.1 1 160 +
Chr1	stalkie_big_nohaplotig	CDS	60207321	60207688	.	+	2	Parent=FBgn0027364.1.mrna1;Target=FBgn0027364.1 161 528 +
Chr1	stalkie_big_nohaplotig	CDS	60207764	60208281	.	+	0	Parent=FBgn0027364.1.mrna1;Target=FBgn0027364.1 529 1046 +
Chr1	stalkie_big_nohaplotig	CDS	60212088	60212190	.	+	1	Parent=FBgn0027364.1.mrna1;Target=FBgn0027364.1 1047 1149 +
Chr1	gffcl	locus	60215064	60216848	.	+	.	ID=RLOC_00008340;geneIDs=FBgn0037022.1.path1;transcripts=FBgn0037022.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60215064	60216848	.	+	.	ID=FBgn0037022.1.mrna1;geneID=FBgn0037022.1.path1;Name=FBgn0037022.1;Dir=sensecoverage=100.0;identity=99.5;matches=1496;mismatches=7;indels=0;unknowns=0;locus=RLOC_00008340
Chr1	stalkie_big_nohaplotig	exon	60215064	60215169	100	+	.	Parent=FBgn0037022.1.mrna1;Target=FBgn0037022.1 1 106 +
Chr1	stalkie_big_nohaplotig	exon	60215220	60215476	98	+	.	Parent=FBgn0037022.1.mrna1;Target=FBgn0037022.1 107 363 +
Chr1	stalkie_big_nohaplotig	exon	60215541	60215879	100	+	.	Parent=FBgn0037022.1.mrna1;Target=FBgn0037022.1 364 702 +
Chr1	stalkie_big_nohaplotig	exon	60215940	60216185	99	+	.	Parent=FBgn0037022.1.mrna1;Target=FBgn0037022.1 703 948 +
Chr1	stalkie_big_nohaplotig	exon	60216239	60216414	100	+	.	Parent=FBgn0037022.1.mrna1;Target=FBgn0037022.1 949 1124 +
Chr1	stalkie_big_nohaplotig	exon	60216470	60216848	99	+	.	Parent=FBgn0037022.1.mrna1;Target=FBgn0037022.1 1125 1503 +
Chr1	stalkie_big_nohaplotig	CDS	60215064	60215169	.	+	0	Parent=FBgn0037022.1.mrna1;Target=FBgn0037022.1 1 106 +
Chr1	stalkie_big_nohaplotig	CDS	60215220	60215476	.	+	2	Parent=FBgn0037022.1.mrna1;Target=FBgn0037022.1 107 363 +
Chr1	stalkie_big_nohaplotig	CDS	60215541	60215879	.	+	0	Parent=FBgn0037022.1.mrna1;Target=FBgn0037022.1 364 702 +
Chr1	stalkie_big_nohaplotig	CDS	60215940	60216185	.	+	0	Parent=FBgn0037022.1.mrna1;Target=FBgn0037022.1 703 948 +
Chr1	stalkie_big_nohaplotig	CDS	60216239	60216414	.	+	0	Parent=FBgn0037022.1.mrna1;Target=FBgn0037022.1 949 1124 +
Chr1	stalkie_big_nohaplotig	CDS	60216470	60216848	.	+	1	Parent=FBgn0037022.1.mrna1;Target=FBgn0037022.1 1125 1503 +
Chr1	gffcl	locus	60219968	60220962	.	-	.	ID=RLOC_00008341;geneIDs=comp149282_c0_seq1.path1;transcripts=comp149282_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60219968	60220962	.	-	.	ID=comp149282_c0_seq1.mrna1;geneID=comp149282_c0_seq1.path1;Name=comp149282_c0_seq1;Dir=sensecoverage=99.8;identity=99.8;matches=599;mismatches=0;indels=1;unknowns=0;locus=RLOC_00008341
Chr1	stalkie_big_nohaplotig	exon	60219968	60220436	100	-	.	Parent=comp149282_c0_seq1.mrna1;Target=comp149282_c0_seq1 132 600 +
Chr1	stalkie_big_nohaplotig	exon	60220555	60220608	100	-	.	Parent=comp149282_c0_seq1.mrna1;Target=comp149282_c0_seq1 78 131 +
Chr1	stalkie_big_nohaplotig	exon	60220887	60220962	98	-	.	Parent=comp149282_c0_seq1.mrna1;Target=comp149282_c0_seq1 1 77 +
Chr1	stalkie_big_nohaplotig	CDS	60220556	60220608	.	-	0	Parent=comp149282_c0_seq1.mrna1;Target=comp149282_c0_seq1 78 130 +
Chr1	stalkie_big_nohaplotig	CDS	60220887	60220961	.	-	0	Parent=comp149282_c0_seq1.mrna1;Target=comp149282_c0_seq1 2 77 +
Chr1	gffcl	locus	60226500	60227494	.	+	.	ID=RLOC_00008342;geneIDs=comp149282_c0_seq1.path2;transcripts=comp149282_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	60226500	60227494	.	+	.	ID=comp149282_c0_seq1.mrna2;geneID=comp149282_c0_seq1.path2;Name=comp149282_c0_seq1;Dir=sensecoverage=99.8;identity=99.8;matches=599;mismatches=0;indels=1;unknowns=0;locus=RLOC_00008342
Chr1	stalkie_big_nohaplotig	exon	60226500	60226575	98	+	.	Parent=comp149282_c0_seq1.mrna2;Target=comp149282_c0_seq1 1 77 +
Chr1	stalkie_big_nohaplotig	exon	60226854	60226907	100	+	.	Parent=comp149282_c0_seq1.mrna2;Target=comp149282_c0_seq1 78 131 +
Chr1	stalkie_big_nohaplotig	exon	60227026	60227494	100	+	.	Parent=comp149282_c0_seq1.mrna2;Target=comp149282_c0_seq1 132 600 +
Chr1	stalkie_big_nohaplotig	CDS	60226501	60226575	.	+	0	Parent=comp149282_c0_seq1.mrna2;Target=comp149282_c0_seq1 2 77 +
Chr1	stalkie_big_nohaplotig	CDS	60226854	60226906	.	+	0	Parent=comp149282_c0_seq1.mrna2;Target=comp149282_c0_seq1 78 130 +
Chr1	gffcl	locus	60239380	60240648	.	+	.	ID=RLOC_00008343;geneIDs=comp151053_c0_seq1.path1;transcripts=comp151053_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60239380	60240648	.	+	.	ID=comp151053_c0_seq1.mrna1;geneID=comp151053_c0_seq1.path1;Name=comp151053_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=1257;mismatches=10;indels=14;unknowns=0;Target=comp151053_c0_seq1 1279 1 .;CDS_Target=comp151053_c0_seq1 123 1 .;locus=RLOC_00008343
Chr1	stalkie_big_nohaplotig	exon	60239380	60240648	98	+	.	Parent=comp151053_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	60239380	60239502	.	+	0	Parent=comp151053_c0_seq1.mrna1
Chr1	gffcl	locus	60244250	60247125	.	+	.	ID=RLOC_00008344;geneIDs=FBgn0037021.1.path1,comp163571_c1_seq1.path1;transcripts=FBgn0037021.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60244250	60246322	.	+	.	ID=FBgn0037021.1.mrna1;geneID=FBgn0037021.1.path1;Name=FBgn0037021.1;Dir=sensecoverage=100.0;identity=99.7;matches=1812;mismatches=5;indels=0;unknowns=1;locus=RLOC_00008344
Chr1	stalkie_big_nohaplotig	exon	60244250	60244361	100	+	.	Parent=FBgn0037021.1.mrna1;Target=FBgn0037021.1 1 112 +
Chr1	stalkie_big_nohaplotig	exon	60244434	60245232	99	+	.	Parent=FBgn0037021.1.mrna1;Target=FBgn0037021.1 113 911 +
Chr1	stalkie_big_nohaplotig	exon	60245295	60245420	98	+	.	Parent=FBgn0037021.1.mrna1;Target=FBgn0037021.1 912 1037 +
Chr1	stalkie_big_nohaplotig	exon	60245479	60245607	100	+	.	Parent=FBgn0037021.1.mrna1;Target=FBgn0037021.1 1038 1166 +
Chr1	stalkie_big_nohaplotig	exon	60245671	60246322	100	+	.	Parent=FBgn0037021.1.mrna1;Target=FBgn0037021.1 1167 1818 +
Chr1	stalkie_big_nohaplotig	CDS	60244250	60244361	.	+	0	Parent=FBgn0037021.1.mrna1;Target=FBgn0037021.1 1 112 +
Chr1	stalkie_big_nohaplotig	CDS	60244434	60245232	.	+	2	Parent=FBgn0037021.1.mrna1;Target=FBgn0037021.1 113 911 +
Chr1	stalkie_big_nohaplotig	CDS	60245295	60245420	.	+	1	Parent=FBgn0037021.1.mrna1;Target=FBgn0037021.1 912 1037 +
Chr1	stalkie_big_nohaplotig	CDS	60245479	60245607	.	+	1	Parent=FBgn0037021.1.mrna1;Target=FBgn0037021.1 1038 1166 +
Chr1	stalkie_big_nohaplotig	CDS	60245671	60246322	.	+	1	Parent=FBgn0037021.1.mrna1;Target=FBgn0037021.1 1167 1818 +
Chr1	gffcl	locus	60249618	60250802	.	-	.	ID=RLOC_00008345;geneIDs=FBgn0037020.1.path1;transcripts=FBgn0037020.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60249618	60250802	.	-	.	ID=FBgn0037020.1.mrna1;geneID=FBgn0037020.1.path1;Name=FBgn0037020.1;Dir=sensecoverage=99.9;identity=99.8;matches=876;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008345
Chr1	stalkie_big_nohaplotig	exon	60249618	60249803	100	-	.	Parent=FBgn0037020.1.mrna1;Target=FBgn0037020.1 693 878 +
Chr1	stalkie_big_nohaplotig	exon	60249863	60250092	100	-	.	Parent=FBgn0037020.1.mrna1;Target=FBgn0037020.1 463 692 +
Chr1	stalkie_big_nohaplotig	exon	60250266	60250568	100	-	.	Parent=FBgn0037020.1.mrna1;Target=FBgn0037020.1 160 462 +
Chr1	stalkie_big_nohaplotig	exon	60250644	60250802	98	-	.	Parent=FBgn0037020.1.mrna1;Target=FBgn0037020.1 1 159 +
Chr1	stalkie_big_nohaplotig	CDS	60249620	60249803	.	-	1	Parent=FBgn0037020.1.mrna1;Target=FBgn0037020.1 693 876 +
Chr1	stalkie_big_nohaplotig	CDS	60249863	60250092	.	-	0	Parent=FBgn0037020.1.mrna1;Target=FBgn0037020.1 463 692 +
Chr1	stalkie_big_nohaplotig	CDS	60250266	60250568	.	-	0	Parent=FBgn0037020.1.mrna1;Target=FBgn0037020.1 160 462 +
Chr1	stalkie_big_nohaplotig	CDS	60250644	60250802	.	-	0	Parent=FBgn0037020.1.mrna1;Target=FBgn0037020.1 1 159 +
Chr1	gffcl	locus	60253419	60260038	.	+	.	ID=RLOC_00008346;geneIDs=FBgn0263601.1.path1;transcripts=FBgn0263601.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60253419	60260038	.	+	.	ID=FBgn0263601.1.mrna1;geneID=FBgn0263601.1.path1;Name=FBgn0263601.1;Dir=sensecoverage=100.0;identity=99.6;matches=3518;mismatches=13;indels=0;unknowns=0;locus=RLOC_00008346
Chr1	stalkie_big_nohaplotig	exon	60253419	60253709	99	+	.	Parent=FBgn0263601.1.mrna1;Target=FBgn0263601.1 1 291 +
Chr1	stalkie_big_nohaplotig	exon	60256119	60256679	99	+	.	Parent=FBgn0263601.1.mrna1;Target=FBgn0263601.1 292 852 +
Chr1	stalkie_big_nohaplotig	exon	60256861	60257277	99	+	.	Parent=FBgn0263601.1.mrna1;Target=FBgn0263601.1 853 1269 +
Chr1	stalkie_big_nohaplotig	exon	60257338	60257445	100	+	.	Parent=FBgn0263601.1.mrna1;Target=FBgn0263601.1 1270 1377 +
Chr1	stalkie_big_nohaplotig	exon	60257513	60257656	97	+	.	Parent=FBgn0263601.1.mrna1;Target=FBgn0263601.1 1378 1521 +
Chr1	stalkie_big_nohaplotig	exon	60257710	60258117	99	+	.	Parent=FBgn0263601.1.mrna1;Target=FBgn0263601.1 1522 1929 +
Chr1	stalkie_big_nohaplotig	exon	60258178	60258714	99	+	.	Parent=FBgn0263601.1.mrna1;Target=FBgn0263601.1 1930 2466 +
Chr1	stalkie_big_nohaplotig	exon	60258787	60259185	100	+	.	Parent=FBgn0263601.1.mrna1;Target=FBgn0263601.1 2467 2865 +
Chr1	stalkie_big_nohaplotig	exon	60259246	60259515	100	+	.	Parent=FBgn0263601.1.mrna1;Target=FBgn0263601.1 2866 3135 +
Chr1	stalkie_big_nohaplotig	exon	60259580	60259837	100	+	.	Parent=FBgn0263601.1.mrna1;Target=FBgn0263601.1 3136 3393 +
Chr1	stalkie_big_nohaplotig	exon	60259901	60260038	100	+	.	Parent=FBgn0263601.1.mrna1;Target=FBgn0263601.1 3394 3531 +
Chr1	stalkie_big_nohaplotig	CDS	60253419	60253709	.	+	0	Parent=FBgn0263601.1.mrna1;Target=FBgn0263601.1 1 291 +
Chr1	stalkie_big_nohaplotig	CDS	60256119	60256679	.	+	0	Parent=FBgn0263601.1.mrna1;Target=FBgn0263601.1 292 852 +
Chr1	stalkie_big_nohaplotig	CDS	60256861	60257277	.	+	0	Parent=FBgn0263601.1.mrna1;Target=FBgn0263601.1 853 1269 +
Chr1	stalkie_big_nohaplotig	CDS	60257338	60257445	.	+	0	Parent=FBgn0263601.1.mrna1;Target=FBgn0263601.1 1270 1377 +
Chr1	stalkie_big_nohaplotig	CDS	60257513	60257656	.	+	0	Parent=FBgn0263601.1.mrna1;Target=FBgn0263601.1 1378 1521 +
Chr1	stalkie_big_nohaplotig	CDS	60257710	60258117	.	+	0	Parent=FBgn0263601.1.mrna1;Target=FBgn0263601.1 1522 1929 +
Chr1	stalkie_big_nohaplotig	CDS	60258178	60258714	.	+	0	Parent=FBgn0263601.1.mrna1;Target=FBgn0263601.1 1930 2466 +
Chr1	stalkie_big_nohaplotig	CDS	60258787	60259185	.	+	0	Parent=FBgn0263601.1.mrna1;Target=FBgn0263601.1 2467 2865 +
Chr1	stalkie_big_nohaplotig	CDS	60259246	60259515	.	+	0	Parent=FBgn0263601.1.mrna1;Target=FBgn0263601.1 2866 3135 +
Chr1	stalkie_big_nohaplotig	CDS	60259580	60259837	.	+	0	Parent=FBgn0263601.1.mrna1;Target=FBgn0263601.1 3136 3393 +
Chr1	stalkie_big_nohaplotig	CDS	60259901	60260038	.	+	0	Parent=FBgn0263601.1.mrna1;Target=FBgn0263601.1 3394 3531 +
Chr1	gffcl	locus	60261572	60262533	.	-	.	ID=RLOC_00008347;geneIDs=FBgn0036557.1.path1;transcripts=FBgn0036557.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60261572	60262533	.	-	.	ID=FBgn0036557.1.mrna1;geneID=FBgn0036557.1.path1;Name=FBgn0036557.1;Dir=sensecoverage=100.0;identity=99.3;matches=897;mismatches=5;indels=1;unknowns=0;Target=FBgn0036557.1 3 32 +;locus=RLOC_00008347
Chr1	stalkie_big_nohaplotig	exon	60261572	60262208	99	-	.	Parent=FBgn0036557.1.mrna1;Target=FBgn0036557.1 267 903 +
Chr1	stalkie_big_nohaplotig	exon	60262269	60262533	98	-	.	Parent=FBgn0036557.1.mrna1;Target=FBgn0036557.1 1 266 +
Chr1	stalkie_big_nohaplotig	CDS	60262503	60262531	.	-	0	Parent=FBgn0036557.1.mrna1
Chr1	gffcl	locus	60333430	60333786	.	+	.	ID=RLOC_00008349;geneIDs=comp145768_c0_seq1.path1;transcripts=comp145768_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60333430	60333786	.	+	.	ID=comp145768_c0_seq1.mrna1;geneID=comp145768_c0_seq1.path1;Name=comp145768_c0_seq1;Dir=indeterminatecoverage=89.2;identity=99.2;matches=354;mismatches=3;indels=0;unknowns=0;Target=comp145768_c0_seq1 371 15 .;CDS_Target=comp145768_c0_seq1 23 15 .;locus=RLOC_00008349
Chr1	stalkie_big_nohaplotig	exon	60333430	60333786	99	+	.	Parent=comp145768_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	60333430	60333438	.	+	0	Parent=comp145768_c0_seq1.mrna1
Chr1	gffcl	locus	60335298	60335803	.	+	.	ID=RLOC_00008350;geneIDs=comp159348_c0_seq1.path1;transcripts=comp159348_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60335298	60335803	.	+	.	ID=comp159348_c0_seq1.mrna1;geneID=comp159348_c0_seq1.path1;Name=comp159348_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=496;mismatches=10;indels=5;unknowns=0;Target=comp159348_c0_seq1 511 1 .;CDS_Target=comp159348_c0_seq1 255 163 .;locus=RLOC_00008350
Chr1	stalkie_big_nohaplotig	exon	60335298	60335803	97	+	.	Parent=comp159348_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	60335455	60335547	.	+	0	Parent=comp159348_c0_seq1.mrna1
Chr1	gffcl	locus	60336033	60336644	.	-	.	ID=RLOC_00008351;geneIDs=comp118047_c0_seq1.path1;transcripts=comp118047_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60336033	60336644	.	-	.	ID=comp118047_c0_seq1.mrna1;geneID=comp118047_c0_seq1.path1;Name=comp118047_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=607;mismatches=5;indels=1;unknowns=0;Target=comp118047_c0_seq1 613 1 .;CDS_Target=comp118047_c0_seq1 130 2 .;locus=RLOC_00008351
Chr1	stalkie_big_nohaplotig	exon	60336033	60336644	99	-	.	Parent=comp118047_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	60336515	60336643	.	-	0	Parent=comp118047_c0_seq1.mrna1
Chr1	gffcl	locus	60339527	60341254	.	-	.	ID=RLOC_00008352;geneIDs=comp80778_c0_seq1.path1,comp135027_c0_seq1.path1,comp135963_c0_seq1.path1;transcripts=comp135963_c0_seq1.mrna1,comp135027_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60339527	60340283	.	-	.	ID=comp135963_c0_seq1.mrna1;geneID=comp135963_c0_seq1.path1;Name=comp135963_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=753;mismatches=4;indels=0;unknowns=0;Target=comp135963_c0_seq1 757 1 .;CDS_Target=comp135963_c0_seq1 181 2 .;locus=RLOC_00008352
Chr1	stalkie_big_nohaplotig	exon	60339527	60340283	99	-	.	Parent=comp135963_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	60340103	60340282	.	-	0	Parent=comp135963_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60340717	60341254	.	-	.	ID=comp135027_c0_seq1.mrna1;geneID=comp135027_c0_seq1.path1;Name=comp135027_c0_seq1;Dir=indeterminatecoverage=97.6;identity=99.4;matches=536;mismatches=2;indels=1;unknowns=0;Target=comp135027_c0_seq1 552 14 .;CDS_Target=comp135027_c0_seq1 418 236 .;locus=RLOC_00008352
Chr1	stalkie_big_nohaplotig	exon	60340717	60341254	99	-	.	Parent=comp135027_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	60340851	60341033	.	-	0	Parent=comp135027_c0_seq1.mrna1
Chr1	gffcl	locus	60341789	60343876	.	-	.	ID=RLOC_00008353;geneIDs=FBgn0259824.1.path1;transcripts=FBgn0259824.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60341789	60343876	.	-	.	ID=FBgn0259824.1.mrna1;geneID=FBgn0259824.1.path1;Name=FBgn0259824.1;Dir=sensecoverage=100.0;identity=99.9;matches=1913;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008353
Chr1	stalkie_big_nohaplotig	exon	60341789	60342177	100	-	.	Parent=FBgn0259824.1.mrna1;Target=FBgn0259824.1 1526 1914 +
Chr1	stalkie_big_nohaplotig	exon	60342240	60342519	100	-	.	Parent=FBgn0259824.1.mrna1;Target=FBgn0259824.1 1246 1525 +
Chr1	stalkie_big_nohaplotig	exon	60342573	60343247	100	-	.	Parent=FBgn0259824.1.mrna1;Target=FBgn0259824.1 571 1245 +
Chr1	stalkie_big_nohaplotig	exon	60343307	60343876	99	-	.	Parent=FBgn0259824.1.mrna1;Target=FBgn0259824.1 1 570 +
Chr1	stalkie_big_nohaplotig	CDS	60341789	60342177	.	-	2	Parent=FBgn0259824.1.mrna1;Target=FBgn0259824.1 1526 1914 +
Chr1	stalkie_big_nohaplotig	CDS	60342240	60342519	.	-	0	Parent=FBgn0259824.1.mrna1;Target=FBgn0259824.1 1246 1525 +
Chr1	stalkie_big_nohaplotig	CDS	60342573	60343247	.	-	0	Parent=FBgn0259824.1.mrna1;Target=FBgn0259824.1 571 1245 +
Chr1	stalkie_big_nohaplotig	CDS	60343307	60343876	.	-	0	Parent=FBgn0259824.1.mrna1;Target=FBgn0259824.1 1 570 +
Chr1	gffcl	locus	60344556	60348216	.	+	.	ID=RLOC_00008354;geneIDs=FBgn0263600.1.path1;transcripts=FBgn0263600.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60344556	60348216	.	+	.	ID=FBgn0263600.1.mrna1;geneID=FBgn0263600.1.path1;Name=FBgn0263600.1;Dir=sensecoverage=100.0;identity=99.3;matches=3286;mismatches=23;indels=0;unknowns=0;locus=RLOC_00008354
Chr1	stalkie_big_nohaplotig	exon	60344556	60344644	100	+	.	Parent=FBgn0263600.1.mrna1;Target=FBgn0263600.1 1 89 +
Chr1	stalkie_big_nohaplotig	exon	60344696	60345722	99	+	.	Parent=FBgn0263600.1.mrna1;Target=FBgn0263600.1 90 1116 +
Chr1	stalkie_big_nohaplotig	exon	60345779	60346681	98	+	.	Parent=FBgn0263600.1.mrna1;Target=FBgn0263600.1 1117 2019 +
Chr1	stalkie_big_nohaplotig	exon	60346775	60347228	99	+	.	Parent=FBgn0263600.1.mrna1;Target=FBgn0263600.1 2020 2473 +
Chr1	stalkie_big_nohaplotig	exon	60347289	60347756	99	+	.	Parent=FBgn0263600.1.mrna1;Target=FBgn0263600.1 2474 2941 +
Chr1	stalkie_big_nohaplotig	exon	60347849	60348216	99	+	.	Parent=FBgn0263600.1.mrna1;Target=FBgn0263600.1 2942 3309 +
Chr1	stalkie_big_nohaplotig	CDS	60344556	60344644	.	+	0	Parent=FBgn0263600.1.mrna1;Target=FBgn0263600.1 1 89 +
Chr1	stalkie_big_nohaplotig	CDS	60344696	60345722	.	+	1	Parent=FBgn0263600.1.mrna1;Target=FBgn0263600.1 90 1116 +
Chr1	stalkie_big_nohaplotig	CDS	60345779	60346681	.	+	0	Parent=FBgn0263600.1.mrna1;Target=FBgn0263600.1 1117 2019 +
Chr1	stalkie_big_nohaplotig	CDS	60346775	60347228	.	+	0	Parent=FBgn0263600.1.mrna1;Target=FBgn0263600.1 2020 2473 +
Chr1	stalkie_big_nohaplotig	CDS	60347289	60347756	.	+	2	Parent=FBgn0263600.1.mrna1;Target=FBgn0263600.1 2474 2941 +
Chr1	stalkie_big_nohaplotig	CDS	60347849	60348216	.	+	2	Parent=FBgn0263600.1.mrna1;Target=FBgn0263600.1 2942 3309 +
Chr1	gffcl	locus	60348688	60349332	.	-	.	ID=RLOC_00008355;geneIDs=FBgn0000115.1.path1;transcripts=FBgn0000115.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60348688	60349332	.	-	.	ID=FBgn0000115.1.mrna1;geneID=FBgn0000115.1.path1;Name=FBgn0000115.1;Dir=sensecoverage=98.4;identity=99.6;matches=535;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008355
Chr1	stalkie_big_nohaplotig	exon	60348688	60348894	99	-	.	Parent=FBgn0000115.1.mrna1;Target=FBgn0000115.1 340 546 +
Chr1	stalkie_big_nohaplotig	exon	60348949	60349060	100	-	.	Parent=FBgn0000115.1.mrna1;Target=FBgn0000115.1 228 339 +
Chr1	stalkie_big_nohaplotig	exon	60349115	60349332	99	-	.	Parent=FBgn0000115.1.mrna1;Target=FBgn0000115.1 10 227 +
Chr1	stalkie_big_nohaplotig	CDS	60348688	60348894	.	-	0	Parent=FBgn0000115.1.mrna1;Target=FBgn0000115.1 340 546 +
Chr1	stalkie_big_nohaplotig	CDS	60348949	60349060	.	-	1	Parent=FBgn0000115.1.mrna1;Target=FBgn0000115.1 228 339 +
Chr1	stalkie_big_nohaplotig	CDS	60349115	60349332	.	-	0	Parent=FBgn0000115.1.mrna1;Target=FBgn0000115.1 10 227 +
Chr1	gffcl	locus	60350311	60373578	.	+	.	ID=RLOC_00008356;geneIDs=FBgn0000212.1.path1;transcripts=FBgn0000212.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60350311	60373578	.	+	.	ID=FBgn0000212.1.mrna1;geneID=FBgn0000212.1.path1;Name=FBgn0000212.1;Dir=sensecoverage=100.0;identity=99.9;matches=5181;mismatches=2;indels=1;unknowns=0;locus=RLOC_00008356
Chr1	stalkie_big_nohaplotig	exon	60350311	60350986	100	+	.	Parent=FBgn0000212.1.mrna1;Target=FBgn0000212.1 1 676 +
Chr1	stalkie_big_nohaplotig	exon	60351047	60351129	100	+	.	Parent=FBgn0000212.1.mrna1;Target=FBgn0000212.1 677 759 +
Chr1	stalkie_big_nohaplotig	exon	60367774	60368928	99	+	.	Parent=FBgn0000212.1.mrna1;Target=FBgn0000212.1 760 1914 +
Chr1	stalkie_big_nohaplotig	exon	60368996	60369856	100	+	.	Parent=FBgn0000212.1.mrna1;Target=FBgn0000212.1 1915 2775 +
Chr1	stalkie_big_nohaplotig	exon	60369913	60370720	100	+	.	Parent=FBgn0000212.1.mrna1;Target=FBgn0000212.1 2776 3583 +
Chr1	stalkie_big_nohaplotig	exon	60370789	60371577	100	+	.	Parent=FBgn0000212.1.mrna1;Target=FBgn0000212.1 3584 4372 +
Chr1	stalkie_big_nohaplotig	exon	60372768	60373578	99	+	.	Parent=FBgn0000212.1.mrna1;Target=FBgn0000212.1 4373 5184 +
Chr1	stalkie_big_nohaplotig	CDS	60350311	60350986	.	+	0	Parent=FBgn0000212.1.mrna1;Target=FBgn0000212.1 1 676 +
Chr1	stalkie_big_nohaplotig	CDS	60351047	60351129	.	+	2	Parent=FBgn0000212.1.mrna1;Target=FBgn0000212.1 677 759 +
Chr1	stalkie_big_nohaplotig	CDS	60367774	60368928	.	+	0	Parent=FBgn0000212.1.mrna1;Target=FBgn0000212.1 760 1914 +
Chr1	stalkie_big_nohaplotig	CDS	60368996	60369856	.	+	0	Parent=FBgn0000212.1.mrna1;Target=FBgn0000212.1 1915 2775 +
Chr1	stalkie_big_nohaplotig	CDS	60369913	60370720	.	+	0	Parent=FBgn0000212.1.mrna1;Target=FBgn0000212.1 2776 3583 +
Chr1	stalkie_big_nohaplotig	CDS	60370789	60371577	.	+	2	Parent=FBgn0000212.1.mrna1;Target=FBgn0000212.1 3584 4372 +
Chr1	stalkie_big_nohaplotig	CDS	60372768	60373578	.	+	2	Parent=FBgn0000212.1.mrna1;Target=FBgn0000212.1 4373 5184 +
Chr1	gffcl	locus	60351232	60352844	.	-	.	ID=RLOC_00008357;geneIDs=FBgn0036551.1.path1;transcripts=FBgn0036551.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60351232	60352844	.	-	.	ID=FBgn0036551.1.mrna1;geneID=FBgn0036551.1.path1;Name=FBgn0036551.1;Dir=sensecoverage=100.0;identity=99.9;matches=935;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008357
Chr1	stalkie_big_nohaplotig	exon	60351232	60351499	99	-	.	Parent=FBgn0036551.1.mrna1;Target=FBgn0036551.1 669 936 +
Chr1	stalkie_big_nohaplotig	exon	60351575	60351678	100	-	.	Parent=FBgn0036551.1.mrna1;Target=FBgn0036551.1 565 668 +
Chr1	stalkie_big_nohaplotig	exon	60352281	60352844	100	-	.	Parent=FBgn0036551.1.mrna1;Target=FBgn0036551.1 1 564 +
Chr1	stalkie_big_nohaplotig	CDS	60351232	60351499	.	-	1	Parent=FBgn0036551.1.mrna1;Target=FBgn0036551.1 669 936 +
Chr1	stalkie_big_nohaplotig	CDS	60351575	60351678	.	-	0	Parent=FBgn0036551.1.mrna1;Target=FBgn0036551.1 565 668 +
Chr1	stalkie_big_nohaplotig	CDS	60352281	60352844	.	-	0	Parent=FBgn0036551.1.mrna1;Target=FBgn0036551.1 1 564 +
Chr1	gffcl	locus	60360729	60363415	.	-	.	ID=RLOC_00008358;geneIDs=FBgn0036550.1.path1;transcripts=FBgn0036550.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60360729	60363415	.	-	.	ID=FBgn0036550.1.mrna1;geneID=FBgn0036550.1.path1;Name=FBgn0036550.1;Dir=sensecoverage=100.0;identity=99.4;matches=868;mismatches=5;indels=0;unknowns=0;locus=RLOC_00008358
Chr1	stalkie_big_nohaplotig	exon	60360729	60360996	99	-	.	Parent=FBgn0036550.1.mrna1;Target=FBgn0036550.1 606 873 +
Chr1	stalkie_big_nohaplotig	exon	60362722	60362825	100	-	.	Parent=FBgn0036550.1.mrna1;Target=FBgn0036550.1 502 605 +
Chr1	stalkie_big_nohaplotig	exon	60362915	60363415	99	-	.	Parent=FBgn0036550.1.mrna1;Target=FBgn0036550.1 1 501 +
Chr1	stalkie_big_nohaplotig	CDS	60360729	60360996	.	-	1	Parent=FBgn0036550.1.mrna1;Target=FBgn0036550.1 606 873 +
Chr1	stalkie_big_nohaplotig	CDS	60362722	60362825	.	-	0	Parent=FBgn0036550.1.mrna1;Target=FBgn0036550.1 502 605 +
Chr1	stalkie_big_nohaplotig	CDS	60362915	60363415	.	-	0	Parent=FBgn0036550.1.mrna1;Target=FBgn0036550.1 1 501 +
Chr1	gffcl	locus	60374439	60375402	.	+	.	ID=RLOC_00008359;geneIDs=comp158980_c0_seq1.path1;transcripts=comp158980_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60374439	60375402	.	+	.	ID=comp158980_c0_seq1.mrna1;geneID=comp158980_c0_seq1.path1;Name=comp158980_c0_seq1;Dir=indeterminatecoverage=97.9;identity=99.4;matches=958;mismatches=6;indels=0;unknowns=0;Target=comp158980_c0_seq1 964 1 .;CDS_Target=comp158980_c0_seq1 634 464 .;locus=RLOC_00008359
Chr1	stalkie_big_nohaplotig	exon	60374439	60375402	99	+	.	Parent=comp158980_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	60374902	60375072	.	+	0	Parent=comp158980_c0_seq1.mrna1
Chr1	gffcl	locus	60377527	60380859	.	-	.	ID=RLOC_00008360;geneIDs=FBgn0036549.1.path1;transcripts=FBgn0036549.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60377527	60380859	.	-	.	ID=FBgn0036549.1.mrna1;geneID=FBgn0036549.1.path1;Name=FBgn0036549.1;Dir=sensecoverage=100.0;identity=99.9;matches=1025;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008360
Chr1	stalkie_big_nohaplotig	exon	60377527	60377651	100	-	.	Parent=FBgn0036549.1.mrna1;Target=FBgn0036549.1 902 1026 +
Chr1	stalkie_big_nohaplotig	exon	60377714	60378269	100	-	.	Parent=FBgn0036549.1.mrna1;Target=FBgn0036549.1 346 901 +
Chr1	stalkie_big_nohaplotig	exon	60380515	60380859	99	-	.	Parent=FBgn0036549.1.mrna1;Target=FBgn0036549.1 1 345 +
Chr1	stalkie_big_nohaplotig	CDS	60377527	60377651	.	-	2	Parent=FBgn0036549.1.mrna1;Target=FBgn0036549.1 902 1026 +
Chr1	stalkie_big_nohaplotig	CDS	60377714	60378269	.	-	0	Parent=FBgn0036549.1.mrna1;Target=FBgn0036549.1 346 901 +
Chr1	stalkie_big_nohaplotig	CDS	60380515	60380859	.	-	0	Parent=FBgn0036549.1.mrna1;Target=FBgn0036549.1 1 345 +
Chr1	gffcl	locus	60400705	60401382	.	-	.	ID=RLOC_00008361;geneIDs=comp143751_c0_seq1.path1;transcripts=comp143751_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60400705	60401382	.	-	.	ID=comp143751_c0_seq1.mrna1;geneID=comp143751_c0_seq1.path1;Name=comp143751_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=624;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008361
Chr1	stalkie_big_nohaplotig	exon	60400705	60401267	99	-	.	Parent=comp143751_c0_seq1.mrna1;Target=comp143751_c0_seq1 1 563 -
Chr1	stalkie_big_nohaplotig	exon	60401321	60401382	100	-	.	Parent=comp143751_c0_seq1.mrna1;Target=comp143751_c0_seq1 564 625 -
Chr1	stalkie_big_nohaplotig	CDS	60400707	60401267	.	-	0	Parent=comp143751_c0_seq1.mrna1;Target=comp143751_c0_seq1 3 563 .
Chr1	stalkie_big_nohaplotig	CDS	60401321	60401380	.	-	0	Parent=comp143751_c0_seq1.mrna1;Target=comp143751_c0_seq1 564 623 .
Chr1	gffcl	locus	60407494	60408054	.	+	.	ID=RLOC_00008362;geneIDs=comp155269_c0_seq1.path1;transcripts=comp155269_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60407494	60408054	.	+	.	ID=comp155269_c0_seq1.mrna1;geneID=comp155269_c0_seq1.path1;Name=comp155269_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.4;matches=559;mismatches=2;indels=7;unknowns=0;Target=comp155269_c0_seq1 569 2 .;CDS_Target=comp155269_c0_seq1 569 435 .;locus=RLOC_00008362
Chr1	stalkie_big_nohaplotig	exon	60407494	60408054	98	+	.	Parent=comp155269_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	60407920	60408054	.	+	0	Parent=comp155269_c0_seq1.mrna1
Chr1	gffcl	locus	60408148	60408606	.	+	.	ID=RLOC_00008363;geneIDs=comp145286_c0_seq1.path1;transcripts=comp145286_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60408148	60408606	.	+	.	ID=comp145286_c0_seq1.mrna1;geneID=comp145286_c0_seq1.path1;Name=comp145286_c0_seq1;Dir=indeterminatecoverage=95.4;identity=99.8;matches=458;mismatches=1;indels=0;unknowns=0;Target=comp145286_c0_seq1 481 23 .;CDS_Target=comp145286_c0_seq1 321 250 .;locus=RLOC_00008363
Chr1	stalkie_big_nohaplotig	exon	60408148	60408606	99	+	.	Parent=comp145286_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	60408375	60408446	.	+	0	Parent=comp145286_c0_seq1.mrna1
Chr1	gffcl	locus	60410245	60410692	.	-	.	ID=RLOC_00008364;geneIDs=comp147396_c0_seq1.path1;transcripts=comp147396_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60410245	60410692	.	-	.	ID=comp147396_c0_seq1.mrna1;geneID=comp147396_c0_seq1.path1;Name=comp147396_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=448;mismatches=0;indels=0;unknowns=0;Target=comp147396_c0_seq1 448 1 .;CDS_Target=comp147396_c0_seq1 327 208 .;locus=RLOC_00008364
Chr1	stalkie_big_nohaplotig	exon	60410245	60410692	100	-	.	Parent=comp147396_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	60410366	60410485	.	-	0	Parent=comp147396_c0_seq1.mrna1
Chr1	gffcl	locus	60422667	60423227	.	-	.	ID=RLOC_00008365;geneIDs=FBgn0040296.1.path1;transcripts=FBgn0040296.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60422667	60423227	.	-	.	ID=FBgn0040296.1.mrna1;geneID=FBgn0040296.1.path1;Name=FBgn0040296.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=558;mismatches=3;indels=0;unknowns=0;Target=FBgn0040296.1 561 1 .;locus=RLOC_00008365
Chr1	stalkie_big_nohaplotig	exon	60422667	60423227	99	-	.	Parent=FBgn0040296.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	60422667	60423227	.	-	0	Parent=FBgn0040296.1.mrna1
Chr1	gffcl	locus	60433172	60433814	.	+	.	ID=RLOC_00008366;geneIDs=comp154809_c0_seq1.path1;transcripts=comp154809_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60433172	60433814	.	+	.	ID=comp154809_c0_seq1.mrna1;geneID=comp154809_c0_seq1.path1;Name=comp154809_c0_seq1;Dir=indeterminatecoverage=97.3;identity=99.4;matches=639;mismatches=4;indels=0;unknowns=0;Target=comp154809_c0_seq1 648 6 .;CDS_Target=comp154809_c0_seq1 93 7 .;locus=RLOC_00008366
Chr1	stalkie_big_nohaplotig	exon	60433172	60433814	99	+	.	Parent=comp154809_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	60433173	60433259	.	+	0	Parent=comp154809_c0_seq1.mrna1
Chr1	gffcl	locus	60439344	60439813	.	-	.	ID=RLOC_00008367;geneIDs=FBgn0026320.1.path1;transcripts=FBgn0026320.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60439344	60439813	.	-	.	ID=FBgn0026320.1.mrna1;geneID=FBgn0026320.1.path1;Name=FBgn0026320.1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=465;mismatches=5;indels=1;unknowns=0;Target=FBgn0026320.1 471 1 .;CDS_Target=FBgn0026320.1 89 3 .;locus=RLOC_00008367
Chr1	stalkie_big_nohaplotig	exon	60439344	60439813	98	-	.	Parent=FBgn0026320.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	60439726	60439811	.	-	0	Parent=FBgn0026320.1.mrna1
Chr1	gffcl	locus	60500523	60500977	.	+	.	ID=RLOC_00008368;geneIDs=comp138830_c0_seq1.path1;transcripts=comp138830_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60500523	60500977	.	+	.	ID=comp138830_c0_seq1.mrna1;geneID=comp138830_c0_seq1.path1;Name=comp138830_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=454;mismatches=1;indels=0;unknowns=0;Target=comp138830_c0_seq1 455 1 .;CDS_Target=comp138830_c0_seq1 402 244 .;locus=RLOC_00008368
Chr1	stalkie_big_nohaplotig	exon	60500523	60500977	99	+	.	Parent=comp138830_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	60500766	60500924	.	+	0	Parent=comp138830_c0_seq1.mrna1
Chr1	gffcl	locus	60542793	60590658	.	-	.	ID=RLOC_00008369;geneIDs=FBgn0000560.1.path1;transcripts=FBgn0000560.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60542793	60590658	.	-	.	ID=FBgn0000560.1.mrna1;geneID=FBgn0000560.1.path1;Name=FBgn0000560.1;Dir=sensecoverage=100.0;identity=99.6;matches=1114;mismatches=5;indels=0;unknowns=0;locus=RLOC_00008369
Chr1	stalkie_big_nohaplotig	exon	60542793	60543812	99	-	.	Parent=FBgn0000560.1.mrna1;Target=FBgn0000560.1 100 1119 +
Chr1	stalkie_big_nohaplotig	exon	60554850	60554927	100	-	.	Parent=FBgn0000560.1.mrna1;Target=FBgn0000560.1 22 99 +
Chr1	stalkie_big_nohaplotig	exon	60590638	60590658	100	-	.	Parent=FBgn0000560.1.mrna1;Target=FBgn0000560.1 1 21 +
Chr1	stalkie_big_nohaplotig	CDS	60542793	60543812	.	-	0	Parent=FBgn0000560.1.mrna1;Target=FBgn0000560.1 100 1119 +
Chr1	stalkie_big_nohaplotig	CDS	60554850	60554927	.	-	0	Parent=FBgn0000560.1.mrna1;Target=FBgn0000560.1 22 99 +
Chr1	stalkie_big_nohaplotig	CDS	60590638	60590658	.	-	0	Parent=FBgn0000560.1.mrna1;Target=FBgn0000560.1 1 21 +
Chr1	gffcl	locus	60768946	60771468	.	+	.	ID=RLOC_00008370;geneIDs=FBgn0001320.1.path1;transcripts=FBgn0001320.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60768946	60771468	.	+	.	ID=FBgn0001320.1.mrna1;geneID=FBgn0001320.1.path1;Name=FBgn0001320.1;Dir=sensecoverage=100.0;identity=99.3;matches=1472;mismatches=4;indels=6;unknowns=0;locus=RLOC_00008370
Chr1	stalkie_big_nohaplotig	exon	60768946	60769008	98	+	.	Parent=FBgn0001320.1.mrna1;Target=FBgn0001320.1 1 63 +
Chr1	stalkie_big_nohaplotig	exon	60769939	60770016	100	+	.	Parent=FBgn0001320.1.mrna1;Target=FBgn0001320.1 64 141 +
Chr1	stalkie_big_nohaplotig	exon	60770134	60771468	99	+	.	Parent=FBgn0001320.1.mrna1;Target=FBgn0001320.1 142 1482 +
Chr1	stalkie_big_nohaplotig	CDS	60768946	60769008	.	+	0	Parent=FBgn0001320.1.mrna1;Target=FBgn0001320.1 1 63 +
Chr1	stalkie_big_nohaplotig	CDS	60769939	60770016	.	+	0	Parent=FBgn0001320.1.mrna1;Target=FBgn0001320.1 64 141 +
Chr1	stalkie_big_nohaplotig	CDS	60770134	60771468	.	+	0	Parent=FBgn0001320.1.mrna1;Target=FBgn0001320.1 142 1482 +
Chr1	gffcl	locus	60771585	60771900	.	-	.	ID=RLOC_00008371;geneIDs=comp148231_c0_seq1.path1;transcripts=comp148231_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60771585	60771900	.	-	.	ID=comp148231_c0_seq1.mrna1;geneID=comp148231_c0_seq1.path1;Name=comp148231_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.7;matches=315;mismatches=1;indels=0;unknowns=0;Target=comp148231_c0_seq1 316 1 .;CDS_Target=comp148231_c0_seq1 194 159 .;locus=RLOC_00008371
Chr1	stalkie_big_nohaplotig	exon	60771585	60771900	99	-	.	Parent=comp148231_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	60771707	60771742	.	-	0	Parent=comp148231_c0_seq1.mrna1
Chr1	gffcl	locus	60780699	60781634	.	-	.	ID=RLOC_00008372;geneIDs=comp67931_c0_seq1.path1;transcripts=comp67931_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60780699	60781634	.	-	.	ID=comp67931_c0_seq1.mrna1;geneID=comp67931_c0_seq1.path1;Name=comp67931_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.4;matches=930;mismatches=6;indels=0;unknowns=0;Target=comp67931_c0_seq1 937 2 .;CDS_Target=comp67931_c0_seq1 441 280 .;locus=RLOC_00008372
Chr1	stalkie_big_nohaplotig	exon	60780699	60781634	99	-	.	Parent=comp67931_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	60781195	60781356	.	-	0	Parent=comp67931_c0_seq1.mrna1
Chr1	gffcl	locus	60785931	60786364	.	+	.	ID=RLOC_00008373;geneIDs=comp149305_c0_seq1.path1;transcripts=comp149305_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60785931	60786364	.	+	.	ID=comp149305_c0_seq1.mrna1;geneID=comp149305_c0_seq1.path1;Name=comp149305_c0_seq1;Dir=indeterminatecoverage=96.4;identity=95.9;matches=416;mismatches=14;indels=4;unknowns=0;Target=comp149305_c0_seq1 430 1 .;CDS_Target=comp149305_c0_seq1 77 3 .;locus=RLOC_00008373
Chr1	stalkie_big_nohaplotig	exon	60785931	60786364	95	+	.	Parent=comp149305_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	60785933	60786007	.	+	0	Parent=comp149305_c0_seq1.mrna1
Chr1	gffcl	locus	60914211	60916853	.	-	.	ID=RLOC_00008374;geneIDs=FBgn0037014.1.path1;transcripts=FBgn0037014.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60914211	60916853	.	-	.	ID=FBgn0037014.1.mrna1;geneID=FBgn0037014.1.path1;Name=FBgn0037014.1;Dir=sensecoverage=100.0;identity=99.1;matches=2566;mismatches=23;indels=0;unknowns=0;locus=RLOC_00008374
Chr1	stalkie_big_nohaplotig	exon	60914211	60915774	98	-	.	Parent=FBgn0037014.1.mrna1;Target=FBgn0037014.1 1026 2589 +
Chr1	stalkie_big_nohaplotig	exon	60915829	60916853	99	-	.	Parent=FBgn0037014.1.mrna1;Target=FBgn0037014.1 1 1025 +
Chr1	stalkie_big_nohaplotig	CDS	60914211	60915774	.	-	1	Parent=FBgn0037014.1.mrna1;Target=FBgn0037014.1 1026 2589 +
Chr1	stalkie_big_nohaplotig	CDS	60915829	60916853	.	-	0	Parent=FBgn0037014.1.mrna1;Target=FBgn0037014.1 1 1025 +
Chr1	gffcl	locus	60925679	60926524	.	+	.	ID=RLOC_00008375;geneIDs=comp159680_c1_seq1.path1;transcripts=comp159680_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60925679	60926524	.	+	.	ID=comp159680_c1_seq1.mrna1;geneID=comp159680_c1_seq1.path1;Name=comp159680_c1_seq1;Dir=indeterminatecoverage=52.1;identity=96.2;matches=835;mismatches=11;indels=22;unknowns=0;Target=comp159680_c1_seq1 892 25 .;CDS_Target=comp159680_c1_seq1 428 270 .;locus=RLOC_00008375
Chr1	stalkie_big_nohaplotig	exon	60925679	60926524	96	+	.	Parent=comp159680_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	60925924	60926082	.	+	0	Parent=comp159680_c1_seq1.mrna1
Chr1	gffcl	locus	60958891	62279634	.	-	.	ID=RLOC_00008376;geneIDs=comp112533_c1_seq1.path1;transcripts=comp112533_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60958891	62279634	.	-	.	ID=comp112533_c1_seq1.mrna1;geneID=comp112533_c1_seq1.path1;Name=comp112533_c1_seq1;Dir=indeterminatecoverage=76.9;identity=95.6;matches=344;mismatches=4;indels=12;unknowns=0;locus=RLOC_00008376
Chr1	stalkie_big_nohaplotig	exon	60958891	60959201	94	-	.	Parent=comp112533_c1_seq1.mrna1;Target=comp112533_c1_seq1 533 219 .
Chr1	stalkie_big_nohaplotig	exon	60961950	60961959	100	-	.	Parent=comp112533_c1_seq1.mrna1;Target=comp112533_c1_seq1 197 188 .
Chr1	stalkie_big_nohaplotig	exon	60964801	60964804	100	-	.	Parent=comp112533_c1_seq1.mrna1;Target=comp112533_c1_seq1 187 184 .
Chr1	stalkie_big_nohaplotig	exon	60969951	60969953	100	-	.	Parent=comp112533_c1_seq1.mrna1;Target=comp112533_c1_seq1 183 181 .
Chr1	stalkie_big_nohaplotig	exon	60972977	60972984	100	-	.	Parent=comp112533_c1_seq1.mrna1;Target=comp112533_c1_seq1 149 142 .
Chr1	stalkie_big_nohaplotig	exon	60972999	60973004	100	-	.	Parent=comp112533_c1_seq1.mrna1;Target=comp112533_c1_seq1 107 102 .
Chr1	stalkie_big_nohaplotig	exon	62279625	62279634	100	-	.	Parent=comp112533_c1_seq1.mrna1;Target=comp112533_c1_seq1 101 92 .
Chr1	stalkie_big_nohaplotig	CDS	60972999	60973004	.	-	2	Parent=comp112533_c1_seq1.mrna1;Target=comp112533_c1_seq1 107 102 .
Chr1	stalkie_big_nohaplotig	CDS	62279625	62279634	.	-	0	Parent=comp112533_c1_seq1.mrna1;Target=comp112533_c1_seq1 101 92 .
Chr1	gffcl	locus	60962062	60963481	.	-	.	ID=RLOC_00008377;geneIDs=comp154634_c0_seq1.path1,comp5710864_c0_seq1.path1;transcripts=comp154634_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60962062	60963481	.	-	.	ID=comp154634_c0_seq1.mrna1;geneID=comp154634_c0_seq1.path1;Name=comp154634_c0_seq1;Dir=antisensecoverage=97.4;identity=94.8;matches=1283;mismatches=18;indels=53;unknowns=0;Target=comp154634_c0_seq1 637 1197 .;locus=RLOC_00008377
Chr1	stalkie_big_nohaplotig	exon	60962062	60962427	84	-	.	Parent=comp154634_c0_seq1.mrna1;Target=comp154634_c0_seq1 22 440 -
Chr1	stalkie_big_nohaplotig	exon	60962493	60962583	98	-	.	Parent=comp154634_c0_seq1.mrna1;Target=comp154634_c0_seq1 441 531 -
Chr1	stalkie_big_nohaplotig	exon	60962638	60963481	99	-	.	Parent=comp154634_c0_seq1.mrna1;Target=comp154634_c0_seq1 532 1375 -
Chr1	stalkie_big_nohaplotig	CDS	60962743	60963303	.	-	0	Parent=comp154634_c0_seq1.mrna1
Chr1	gffcl	locus	60967594	60968107	.	+	.	ID=RLOC_00008378;geneIDs=comp114917_c0_seq1.path1;transcripts=comp114917_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60967594	60968107	.	+	.	ID=comp114917_c0_seq1.mrna1;geneID=comp114917_c0_seq1.path1;Name=comp114917_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.5;matches=493;mismatches=20;indels=3;unknowns=0;Target=comp114917_c0_seq1 515 1 .;CDS_Target=comp114917_c0_seq1 181 2 .;locus=RLOC_00008378
Chr1	stalkie_big_nohaplotig	exon	60967594	60968107	95	+	.	Parent=comp114917_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	60967595	60967774	.	+	0	Parent=comp114917_c0_seq1.mrna1
Chr1	gffcl	locus	60970590	60971126	.	+	.	ID=RLOC_00008379;geneIDs=comp584761_c0_seq1.path1;transcripts=comp584761_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60970590	60971126	.	+	.	ID=comp584761_c0_seq1.mrna1;geneID=comp584761_c0_seq1.path1;Name=comp584761_c0_seq1;Dir=indeterminatecoverage=96.6;identity=90.1;matches=493;mismatches=31;indels=23;unknowns=0;Target=comp584761_c0_seq1 102 97 .;locus=RLOC_00008379
Chr1	stalkie_big_nohaplotig	exon	60970590	60970758	82	+	.	Parent=comp584761_c0_seq1.mrna1;Target=comp584761_c0_seq1 189 20 .
Chr1	stalkie_big_nohaplotig	exon	60970761	60971126	93	+	.	Parent=comp584761_c0_seq1.mrna1;Target=comp584761_c0_seq1 567 202 .
Chr1	stalkie_big_nohaplotig	CDS	60970678	60970683	.	+	0	Parent=comp584761_c0_seq1.mrna1
Chr1	gffcl	locus	60974579	61029223	.	+	.	ID=RLOC_00008380;geneIDs=FBgn0001323.1.path1;transcripts=FBgn0001323.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	60974579	61029223	.	+	.	ID=FBgn0001323.1.mrna1;geneID=FBgn0001323.1.path1;Name=FBgn0001323.1;Dir=sensecoverage=100.0;identity=99.7;matches=1873;mismatches=5;indels=0;unknowns=0;locus=RLOC_00008380
Chr1	stalkie_big_nohaplotig	exon	60974579	60974611	100	+	.	Parent=FBgn0001323.1.mrna1;Target=FBgn0001323.1 1 33 +
Chr1	stalkie_big_nohaplotig	exon	61018819	61018896	98	+	.	Parent=FBgn0001323.1.mrna1;Target=FBgn0001323.1 34 111 +
Chr1	stalkie_big_nohaplotig	exon	61027457	61029223	99	+	.	Parent=FBgn0001323.1.mrna1;Target=FBgn0001323.1 112 1878 +
Chr1	stalkie_big_nohaplotig	CDS	60974579	60974611	.	+	0	Parent=FBgn0001323.1.mrna1;Target=FBgn0001323.1 1 33 +
Chr1	stalkie_big_nohaplotig	CDS	61018819	61018896	.	+	0	Parent=FBgn0001323.1.mrna1;Target=FBgn0001323.1 34 111 +
Chr1	stalkie_big_nohaplotig	CDS	61027457	61029223	.	+	0	Parent=FBgn0001323.1.mrna1;Target=FBgn0001323.1 112 1878 +
Chr1	gffcl	locus	61068903	61080316	.	+	.	ID=RLOC_00008381;geneIDs=FBgn0031961.1.path1;transcripts=FBgn0031961.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61068903	61080316	.	+	.	ID=FBgn0031961.1.mrna1;geneID=FBgn0031961.1.path1;Name=FBgn0031961.1;Dir=sensecoverage=100.0;identity=99.9;matches=1679;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008381
Chr1	stalkie_big_nohaplotig	exon	61068903	61069078	100	+	.	Parent=FBgn0031961.1.mrna1;Target=FBgn0031961.1 1 176 +
Chr1	stalkie_big_nohaplotig	exon	61072071	61072230	100	+	.	Parent=FBgn0031961.1.mrna1;Target=FBgn0031961.1 177 336 +
Chr1	stalkie_big_nohaplotig	exon	61072290	61072452	100	+	.	Parent=FBgn0031961.1.mrna1;Target=FBgn0031961.1 337 499 +
Chr1	stalkie_big_nohaplotig	exon	61076453	61076586	100	+	.	Parent=FBgn0031961.1.mrna1;Target=FBgn0031961.1 500 633 +
Chr1	stalkie_big_nohaplotig	exon	61076642	61077063	100	+	.	Parent=FBgn0031961.1.mrna1;Target=FBgn0031961.1 634 1055 +
Chr1	stalkie_big_nohaplotig	exon	61077126	61077243	100	+	.	Parent=FBgn0031961.1.mrna1;Target=FBgn0031961.1 1056 1173 +
Chr1	stalkie_big_nohaplotig	exon	61077302	61077480	100	+	.	Parent=FBgn0031961.1.mrna1;Target=FBgn0031961.1 1174 1352 +
Chr1	stalkie_big_nohaplotig	exon	61077542	61077658	100	+	.	Parent=FBgn0031961.1.mrna1;Target=FBgn0031961.1 1353 1469 +
Chr1	stalkie_big_nohaplotig	exon	61080106	61080316	99	+	.	Parent=FBgn0031961.1.mrna1;Target=FBgn0031961.1 1470 1680 +
Chr1	stalkie_big_nohaplotig	CDS	61068903	61069078	.	+	0	Parent=FBgn0031961.1.mrna1;Target=FBgn0031961.1 1 176 +
Chr1	stalkie_big_nohaplotig	CDS	61072071	61072230	.	+	1	Parent=FBgn0031961.1.mrna1;Target=FBgn0031961.1 177 336 +
Chr1	stalkie_big_nohaplotig	CDS	61072290	61072452	.	+	0	Parent=FBgn0031961.1.mrna1;Target=FBgn0031961.1 337 499 +
Chr1	stalkie_big_nohaplotig	CDS	61076453	61076586	.	+	2	Parent=FBgn0031961.1.mrna1;Target=FBgn0031961.1 500 633 +
Chr1	stalkie_big_nohaplotig	CDS	61076642	61077063	.	+	0	Parent=FBgn0031961.1.mrna1;Target=FBgn0031961.1 634 1055 +
Chr1	stalkie_big_nohaplotig	CDS	61077126	61077243	.	+	1	Parent=FBgn0031961.1.mrna1;Target=FBgn0031961.1 1056 1173 +
Chr1	stalkie_big_nohaplotig	CDS	61077302	61077480	.	+	0	Parent=FBgn0031961.1.mrna1;Target=FBgn0031961.1 1174 1352 +
Chr1	stalkie_big_nohaplotig	CDS	61077542	61077658	.	+	1	Parent=FBgn0031961.1.mrna1;Target=FBgn0031961.1 1353 1469 +
Chr1	stalkie_big_nohaplotig	CDS	61080106	61080316	.	+	1	Parent=FBgn0031961.1.mrna1;Target=FBgn0031961.1 1470 1680 +
Chr1	gffcl	locus	61074125	61413030	.	+	.	ID=RLOC_00008382;geneIDs=comp118148_c0_seq1.path1;transcripts=comp118148_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61074125	61413030	.	+	.	ID=comp118148_c0_seq1.mrna1;geneID=comp118148_c0_seq1.path1;Name=comp118148_c0_seq1;Dir=indeterminatecoverage=99.2;identity=91.7;matches=242;mismatches=20;indels=2;unknowns=0;Target=comp118148_c0_seq1 120 34 .;locus=RLOC_00008382
Chr1	stalkie_big_nohaplotig	exon	61074125	61074245	100	+	.	Parent=comp118148_c0_seq1.mrna1;Target=comp118148_c0_seq1 123 3 .
Chr1	stalkie_big_nohaplotig	exon	61412888	61413030	84	+	.	Parent=comp118148_c0_seq1.mrna1;Target=comp118148_c0_seq1 264 124 .
Chr1	stalkie_big_nohaplotig	CDS	61074156	61074242	.	+	0	Parent=comp118148_c0_seq1.mrna1
Chr1	gffcl	locus	61075811	61076140	.	+	.	ID=RLOC_00008383;geneIDs=FBgn0261790.1.path1;transcripts=FBgn0261790.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61075811	61076140	.	+	.	ID=FBgn0261790.1.mrna1;geneID=FBgn0261790.1.path1;Name=FBgn0261790.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=330;mismatches=0;indels=0;unknowns=0;Target=FBgn0261790.1 330 1 .;locus=RLOC_00008383
Chr1	stalkie_big_nohaplotig	exon	61075811	61076140	100	+	.	Parent=FBgn0261790.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	61075811	61076140	.	+	0	Parent=FBgn0261790.1.mrna1
Chr1	gffcl	locus	61095021	62790307	.	-	.	ID=RLOC_00008384;geneIDs=comp145602_c1_seq1.path1;transcripts=comp145602_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61095021	62790307	.	-	.	ID=comp145602_c1_seq1.mrna1;geneID=comp145602_c1_seq1.path1;Name=comp145602_c1_seq1;Dir=indeterminatecoverage=80.7;identity=100.0;matches=364;mismatches=0;indels=0;unknowns=0;Target=comp145602_c1_seq1 178 59 .;locus=RLOC_00008384
Chr1	stalkie_big_nohaplotig	exon	61095021	61095025	100	-	.	Parent=comp145602_c1_seq1.mrna1;Target=comp145602_c1_seq1 365 361 .
Chr1	stalkie_big_nohaplotig	exon	61099047	61099052	100	-	.	Parent=comp145602_c1_seq1.mrna1;Target=comp145602_c1_seq1 360 355 .
Chr1	stalkie_big_nohaplotig	exon	62789955	62790307	100	-	.	Parent=comp145602_c1_seq1.mrna1;Target=comp145602_c1_seq1 354 2 .
Chr1	stalkie_big_nohaplotig	CDS	62790131	62790250	.	-	0	Parent=comp145602_c1_seq1.mrna1
Chr1	gffcl	locus	61132743	61133752	.	-	.	ID=RLOC_00008385;geneIDs=comp154702_c0_seq1.path1;transcripts=comp154702_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61132743	61133752	.	-	.	ID=comp154702_c0_seq1.mrna1;geneID=comp154702_c0_seq1.path1;Name=comp154702_c0_seq1;Dir=sensecoverage=99.9;identity=99.4;matches=680;mismatches=0;indels=4;unknowns=0;Target=comp154702_c0_seq1 2 103 +;locus=RLOC_00008385
Chr1	stalkie_big_nohaplotig	exon	61132743	61133302	99	-	.	Parent=comp154702_c0_seq1.mrna1;Target=comp154702_c0_seq1 125 680 +
Chr1	stalkie_big_nohaplotig	exon	61133629	61133752	100	-	.	Parent=comp154702_c0_seq1.mrna1;Target=comp154702_c0_seq1 1 124 +
Chr1	stalkie_big_nohaplotig	CDS	61133650	61133751	.	-	0	Parent=comp154702_c0_seq1.mrna1
Chr1	gffcl	locus	61150987	61151859	.	+	.	ID=RLOC_00008386;geneIDs=comp159037_c0_seq1.path1;transcripts=comp159037_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61150987	61151859	.	+	.	ID=comp159037_c0_seq1.mrna1;geneID=comp159037_c0_seq1.path1;Name=comp159037_c0_seq1;Dir=sensecoverage=97.8;identity=98.3;matches=802;mismatches=14;indels=0;unknowns=0;locus=RLOC_00008386
Chr1	stalkie_big_nohaplotig	exon	61150987	61151190	99	+	.	Parent=comp159037_c0_seq1.mrna1;Target=comp159037_c0_seq1 9 212 +
Chr1	stalkie_big_nohaplotig	exon	61151248	61151859	97	+	.	Parent=comp159037_c0_seq1.mrna1;Target=comp159037_c0_seq1 213 824 +
Chr1	stalkie_big_nohaplotig	CDS	61151045	61151190	.	+	0	Parent=comp159037_c0_seq1.mrna1;Target=comp159037_c0_seq1 67 212 +
Chr1	stalkie_big_nohaplotig	CDS	61151248	61151701	.	+	1	Parent=comp159037_c0_seq1.mrna1;Target=comp159037_c0_seq1 213 666 +
Chr1	gffcl	locus	61221280	61222954	.	-	.	ID=RLOC_00008387;geneIDs=FBgn0035620.1.path1;transcripts=FBgn0035620.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61221280	61222954	.	-	.	ID=FBgn0035620.1.mrna1;geneID=FBgn0035620.1.path1;Name=FBgn0035620.1;Dir=sensecoverage=100.0;identity=99.0;matches=1571;mismatches=10;indels=6;unknowns=0;locus=RLOC_00008387
Chr1	stalkie_big_nohaplotig	exon	61221280	61221618	99	-	.	Parent=FBgn0035620.1.mrna1;Target=FBgn0035620.1 1246 1584 +
Chr1	stalkie_big_nohaplotig	exon	61221710	61222954	98	-	.	Parent=FBgn0035620.1.mrna1;Target=FBgn0035620.1 1 1245 +
Chr1	stalkie_big_nohaplotig	CDS	61221280	61221618	.	-	0	Parent=FBgn0035620.1.mrna1;Target=FBgn0035620.1 1246 1584 +
Chr1	stalkie_big_nohaplotig	CDS	61221710	61222954	.	-	0	Parent=FBgn0035620.1.mrna1;Target=FBgn0035620.1 1 1245 +
Chr1	gffcl	locus	61269122	61270319	.	+	.	ID=RLOC_00008388;geneIDs=comp155069_c0_seq1.path1;transcripts=comp155069_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61269122	61270319	.	+	.	ID=comp155069_c0_seq1.mrna1;geneID=comp155069_c0_seq1.path1;Name=comp155069_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.2;matches=1188;mismatches=9;indels=1;unknowns=0;Target=comp155069_c0_seq1 1197 1 .;CDS_Target=comp155069_c0_seq1 310 164 .;locus=RLOC_00008388
Chr1	stalkie_big_nohaplotig	exon	61269122	61270319	99	+	.	Parent=comp155069_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	61269285	61269431	.	+	0	Parent=comp155069_c0_seq1.mrna1
Chr1	gffcl	locus	61436231	61438504	.	+	.	ID=RLOC_00008390;geneIDs=FBgn0016797.1.path1;transcripts=FBgn0016797.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61436231	61438504	.	+	.	ID=FBgn0016797.1.mrna1;geneID=FBgn0016797.1.path1;Name=FBgn0016797.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=2265;mismatches=9;indels=0;unknowns=0;Target=FBgn0016797.1 2274 1 .;locus=RLOC_00008390
Chr1	stalkie_big_nohaplotig	exon	61436231	61438504	99	+	.	Parent=FBgn0016797.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	61436231	61438504	.	+	0	Parent=FBgn0016797.1.mrna1
Chr1	gffcl	locus	61440621	61440905	.	-	.	ID=RLOC_00008391;geneIDs=comp161032_c0_seq1.path1;transcripts=comp161032_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61440621	61440905	.	-	.	ID=comp161032_c0_seq1.mrna1;geneID=comp161032_c0_seq1.path1;Name=comp161032_c0_seq1;Dir=indeterminatecoverage=99.7;identity=96.5;matches=275;mismatches=10;indels=0;unknowns=0;Target=comp161032_c0_seq1 286 2 .;CDS_Target=comp161032_c0_seq1 49 2 .;locus=RLOC_00008391
Chr1	stalkie_big_nohaplotig	exon	61440621	61440905	96	-	.	Parent=comp161032_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	61440858	61440905	.	-	0	Parent=comp161032_c0_seq1.mrna1
Chr1	gffcl	locus	61442857	61443240	.	+	.	ID=RLOC_00008392;geneIDs=comp112609_c0_seq1.path1;transcripts=comp112609_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61442857	61443240	.	+	.	ID=comp112609_c0_seq1.mrna1;geneID=comp112609_c0_seq1.path1;Name=comp112609_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=382;mismatches=2;indels=0;unknowns=0;Target=comp112609_c0_seq1 384 1 .;CDS_Target=comp112609_c0_seq1 190 2 .;locus=RLOC_00008392
Chr1	stalkie_big_nohaplotig	exon	61442857	61443240	99	+	.	Parent=comp112609_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	61442858	61443046	.	+	0	Parent=comp112609_c0_seq1.mrna1
Chr1	gffcl	locus	61470145	61473015	.	-	.	ID=RLOC_00008393;geneIDs=FBgn0036206.1.path1;transcripts=FBgn0036206.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61470145	61473015	.	-	.	ID=FBgn0036206.1.mrna1;geneID=FBgn0036206.1.path1;Name=FBgn0036206.1;Dir=sensecoverage=100.0;identity=99.3;matches=2801;mismatches=19;indels=0;unknowns=0;locus=RLOC_00008393
Chr1	stalkie_big_nohaplotig	exon	61470145	61471672	99	-	.	Parent=FBgn0036206.1.mrna1;Target=FBgn0036206.1 1293 2820 +
Chr1	stalkie_big_nohaplotig	exon	61471724	61473015	99	-	.	Parent=FBgn0036206.1.mrna1;Target=FBgn0036206.1 1 1292 +
Chr1	stalkie_big_nohaplotig	CDS	61470145	61471672	.	-	1	Parent=FBgn0036206.1.mrna1;Target=FBgn0036206.1 1293 2820 +
Chr1	stalkie_big_nohaplotig	CDS	61471724	61473015	.	-	0	Parent=FBgn0036206.1.mrna1;Target=FBgn0036206.1 1 1292 +
Chr1	gffcl	locus	61473384	61474209	.	+	.	ID=RLOC_00008394;geneIDs=FBgn0051648.1.path1;transcripts=FBgn0051648.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61473384	61474209	.	+	.	ID=FBgn0051648.1.mrna1;geneID=FBgn0051648.1.path1;Name=FBgn0051648.1;Dir=sensecoverage=100.0;identity=98.9;matches=700;mismatches=8;indels=0;unknowns=0;locus=RLOC_00008394
Chr1	stalkie_big_nohaplotig	exon	61473384	61473614	98	+	.	Parent=FBgn0051648.1.mrna1;Target=FBgn0051648.1 1 231 +
Chr1	stalkie_big_nohaplotig	exon	61473678	61474001	99	+	.	Parent=FBgn0051648.1.mrna1;Target=FBgn0051648.1 232 555 +
Chr1	stalkie_big_nohaplotig	exon	61474057	61474209	98	+	.	Parent=FBgn0051648.1.mrna1;Target=FBgn0051648.1 556 708 +
Chr1	stalkie_big_nohaplotig	CDS	61473384	61473614	.	+	0	Parent=FBgn0051648.1.mrna1;Target=FBgn0051648.1 1 231 +
Chr1	stalkie_big_nohaplotig	CDS	61473678	61474001	.	+	0	Parent=FBgn0051648.1.mrna1;Target=FBgn0051648.1 232 555 +
Chr1	stalkie_big_nohaplotig	CDS	61474057	61474209	.	+	0	Parent=FBgn0051648.1.mrna1;Target=FBgn0051648.1 556 708 +
Chr1	gffcl	locus	61475216	61477791	.	+	.	ID=RLOC_00008395;geneIDs=FBgn0051915.1.path1;transcripts=FBgn0051915.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61475216	61477791	.	+	.	ID=FBgn0051915.1.mrna1;geneID=FBgn0051915.1.path1;Name=FBgn0051915.1;Dir=sensecoverage=100.0;identity=99.6;matches=1928;mismatches=7;indels=0;unknowns=0;locus=RLOC_00008395
Chr1	stalkie_big_nohaplotig	exon	61475216	61475454	99	+	.	Parent=FBgn0051915.1.mrna1;Target=FBgn0051915.1 1 239 +
Chr1	stalkie_big_nohaplotig	exon	61475510	61475738	99	+	.	Parent=FBgn0051915.1.mrna1;Target=FBgn0051915.1 240 468 +
Chr1	stalkie_big_nohaplotig	exon	61475796	61476376	99	+	.	Parent=FBgn0051915.1.mrna1;Target=FBgn0051915.1 469 1049 +
Chr1	stalkie_big_nohaplotig	exon	61476436	61476564	100	+	.	Parent=FBgn0051915.1.mrna1;Target=FBgn0051915.1 1050 1178 +
Chr1	stalkie_big_nohaplotig	exon	61476638	61476695	100	+	.	Parent=FBgn0051915.1.mrna1;Target=FBgn0051915.1 1179 1236 +
Chr1	stalkie_big_nohaplotig	exon	61476751	61476950	100	+	.	Parent=FBgn0051915.1.mrna1;Target=FBgn0051915.1 1237 1436 +
Chr1	stalkie_big_nohaplotig	exon	61477293	61477791	99	+	.	Parent=FBgn0051915.1.mrna1;Target=FBgn0051915.1 1437 1935 +
Chr1	stalkie_big_nohaplotig	CDS	61475216	61475454	.	+	0	Parent=FBgn0051915.1.mrna1;Target=FBgn0051915.1 1 239 +
Chr1	stalkie_big_nohaplotig	CDS	61475510	61475738	.	+	1	Parent=FBgn0051915.1.mrna1;Target=FBgn0051915.1 240 468 +
Chr1	stalkie_big_nohaplotig	CDS	61475796	61476376	.	+	0	Parent=FBgn0051915.1.mrna1;Target=FBgn0051915.1 469 1049 +
Chr1	stalkie_big_nohaplotig	CDS	61476436	61476564	.	+	1	Parent=FBgn0051915.1.mrna1;Target=FBgn0051915.1 1050 1178 +
Chr1	stalkie_big_nohaplotig	CDS	61476638	61476695	.	+	1	Parent=FBgn0051915.1.mrna1;Target=FBgn0051915.1 1179 1236 +
Chr1	stalkie_big_nohaplotig	CDS	61476751	61476950	.	+	0	Parent=FBgn0051915.1.mrna1;Target=FBgn0051915.1 1237 1436 +
Chr1	stalkie_big_nohaplotig	CDS	61477293	61477791	.	+	1	Parent=FBgn0051915.1.mrna1;Target=FBgn0051915.1 1437 1935 +
Chr1	gffcl	locus	61489269	61499053	.	-	.	ID=RLOC_00008396;geneIDs=FBgn0036939.1.path1;transcripts=FBgn0036939.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61489269	61499053	.	-	.	ID=FBgn0036939.1.mrna1;geneID=FBgn0036939.1.path1;Name=FBgn0036939.1;Dir=sensecoverage=75.0;identity=99.1;matches=1013;mismatches=7;indels=2;unknowns=0;locus=RLOC_00008396
Chr1	stalkie_big_nohaplotig	exon	61489269	61489383	100	-	.	Parent=FBgn0036939.1.mrna1;Target=FBgn0036939.1 938 1052 +
Chr1	stalkie_big_nohaplotig	exon	61489460	61489761	99	-	.	Parent=FBgn0036939.1.mrna1;Target=FBgn0036939.1 636 937 +
Chr1	stalkie_big_nohaplotig	exon	61489828	61490171	99	-	.	Parent=FBgn0036939.1.mrna1;Target=FBgn0036939.1 292 635 +
Chr1	stalkie_big_nohaplotig	exon	61490243	61490473	99	-	.	Parent=FBgn0036939.1.mrna1;Target=FBgn0036939.1 61 291 +
Chr1	stalkie_big_nohaplotig	exon	61499026	61499053	90	-	.	Parent=FBgn0036939.1.mrna1;Target=FBgn0036939.1 31 60 +
Chr1	stalkie_big_nohaplotig	CDS	61489271	61489383	.	-	2	Parent=FBgn0036939.1.mrna1;Target=FBgn0036939.1 938 1050 +
Chr1	stalkie_big_nohaplotig	CDS	61489460	61489761	.	-	1	Parent=FBgn0036939.1.mrna1;Target=FBgn0036939.1 636 937 +
Chr1	stalkie_big_nohaplotig	CDS	61489828	61490171	.	-	0	Parent=FBgn0036939.1.mrna1;Target=FBgn0036939.1 292 635 +
Chr1	stalkie_big_nohaplotig	CDS	61490243	61490449	.	-	0	Parent=FBgn0036939.1.mrna1;Target=FBgn0036939.1 85 291 +
Chr1	gffcl	locus	61515294	61517003	.	+	.	ID=RLOC_00008397;geneIDs=FBgn0036402.1.path1;transcripts=FBgn0036402.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61515294	61517003	.	+	.	ID=FBgn0036402.1.mrna1;geneID=FBgn0036402.1.path1;Name=FBgn0036402.1;Dir=sensecoverage=100.0;identity=99.3;matches=1462;mismatches=10;indels=1;unknowns=0;locus=RLOC_00008397
Chr1	stalkie_big_nohaplotig	exon	61515294	61515664	99	+	.	Parent=FBgn0036402.1.mrna1;Target=FBgn0036402.1 1 371 +
Chr1	stalkie_big_nohaplotig	exon	61515721	61515885	99	+	.	Parent=FBgn0036402.1.mrna1;Target=FBgn0036402.1 372 536 +
Chr1	stalkie_big_nohaplotig	exon	61515941	61516206	99	+	.	Parent=FBgn0036402.1.mrna1;Target=FBgn0036402.1 537 802 +
Chr1	stalkie_big_nohaplotig	exon	61516276	61516736	99	+	.	Parent=FBgn0036402.1.mrna1;Target=FBgn0036402.1 803 1263 +
Chr1	stalkie_big_nohaplotig	exon	61516795	61517003	98	+	.	Parent=FBgn0036402.1.mrna1;Target=FBgn0036402.1 1264 1473 +
Chr1	stalkie_big_nohaplotig	CDS	61515294	61515664	.	+	0	Parent=FBgn0036402.1.mrna1;Target=FBgn0036402.1 1 371 +
Chr1	stalkie_big_nohaplotig	CDS	61515721	61515885	.	+	1	Parent=FBgn0036402.1.mrna1;Target=FBgn0036402.1 372 536 +
Chr1	stalkie_big_nohaplotig	CDS	61515941	61516206	.	+	1	Parent=FBgn0036402.1.mrna1;Target=FBgn0036402.1 537 802 +
Chr1	stalkie_big_nohaplotig	CDS	61516276	61516736	.	+	2	Parent=FBgn0036402.1.mrna1;Target=FBgn0036402.1 803 1263 +
Chr1	stalkie_big_nohaplotig	CDS	61516795	61517003	.	+	0	Parent=FBgn0036402.1.mrna1;Target=FBgn0036402.1 1264 1473 +
Chr1	gffcl	locus	61517804	61519153	.	-	.	ID=RLOC_00008398;geneIDs=FBgn0029936.1.path1;transcripts=FBgn0029936.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61517804	61519153	.	-	.	ID=FBgn0029936.1.mrna1;geneID=FBgn0029936.1.path1;Name=FBgn0029936.1;Dir=sensecoverage=100.0;identity=100.0;matches=1230;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008398
Chr1	stalkie_big_nohaplotig	exon	61517804	61518447	100	-	.	Parent=FBgn0029936.1.mrna1;Target=FBgn0029936.1 587 1230 +
Chr1	stalkie_big_nohaplotig	exon	61518512	61519051	100	-	.	Parent=FBgn0029936.1.mrna1;Target=FBgn0029936.1 47 586 +
Chr1	stalkie_big_nohaplotig	exon	61519108	61519153	100	-	.	Parent=FBgn0029936.1.mrna1;Target=FBgn0029936.1 1 46 +
Chr1	stalkie_big_nohaplotig	CDS	61517804	61518447	.	-	2	Parent=FBgn0029936.1.mrna1;Target=FBgn0029936.1 587 1230 +
Chr1	stalkie_big_nohaplotig	CDS	61518512	61519051	.	-	2	Parent=FBgn0029936.1.mrna1;Target=FBgn0029936.1 47 586 +
Chr1	stalkie_big_nohaplotig	CDS	61519108	61519153	.	-	0	Parent=FBgn0029936.1.mrna1;Target=FBgn0029936.1 1 46 +
Chr1	gffcl	locus	61519754	61520873	.	+	.	ID=RLOC_00008399;geneIDs=FBgn0036994.1.path1;transcripts=FBgn0036994.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61519754	61520873	.	+	.	ID=FBgn0036994.1.mrna1;geneID=FBgn0036994.1.path1;Name=FBgn0036994.1;Dir=sensecoverage=100.0;identity=99.3;matches=1060;mismatches=8;indels=0;unknowns=0;locus=RLOC_00008399
Chr1	stalkie_big_nohaplotig	exon	61519754	61520385	99	+	.	Parent=FBgn0036994.1.mrna1;Target=FBgn0036994.1 1 632 +
Chr1	stalkie_big_nohaplotig	exon	61520438	61520873	99	+	.	Parent=FBgn0036994.1.mrna1;Target=FBgn0036994.1 633 1068 +
Chr1	stalkie_big_nohaplotig	CDS	61519754	61520385	.	+	0	Parent=FBgn0036994.1.mrna1;Target=FBgn0036994.1 1 632 +
Chr1	stalkie_big_nohaplotig	CDS	61520438	61520873	.	+	1	Parent=FBgn0036994.1.mrna1;Target=FBgn0036994.1 633 1068 +
Chr1	gffcl	locus	61521623	61550023	.	-	.	ID=RLOC_00008400;geneIDs=FBgn0036993.1.path1;transcripts=FBgn0036993.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61521623	61550023	.	-	.	ID=FBgn0036993.1.mrna1;geneID=FBgn0036993.1.path1;Name=FBgn0036993.1;Dir=sensecoverage=98.0;identity=99.9;matches=790;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008400
Chr1	stalkie_big_nohaplotig	exon	61521623	61521695	100	-	.	Parent=FBgn0036993.1.mrna1;Target=FBgn0036993.1 719 791 +
Chr1	stalkie_big_nohaplotig	exon	61525031	61525156	100	-	.	Parent=FBgn0036993.1.mrna1;Target=FBgn0036993.1 593 718 +
Chr1	stalkie_big_nohaplotig	exon	61543083	61543187	100	-	.	Parent=FBgn0036993.1.mrna1;Target=FBgn0036993.1 488 592 +
Chr1	stalkie_big_nohaplotig	exon	61549537	61550023	99	-	.	Parent=FBgn0036993.1.mrna1;Target=FBgn0036993.1 1 487 +
Chr1	stalkie_big_nohaplotig	CDS	61521625	61521695	.	-	2	Parent=FBgn0036993.1.mrna1;Target=FBgn0036993.1 719 789 +
Chr1	stalkie_big_nohaplotig	CDS	61525031	61525156	.	-	2	Parent=FBgn0036993.1.mrna1;Target=FBgn0036993.1 593 718 +
Chr1	stalkie_big_nohaplotig	CDS	61543083	61543187	.	-	2	Parent=FBgn0036993.1.mrna1;Target=FBgn0036993.1 488 592 +
Chr1	stalkie_big_nohaplotig	CDS	61549537	61550023	.	-	0	Parent=FBgn0036993.1.mrna1;Target=FBgn0036993.1 1 487 +
Chr1	gffcl	locus	61522149	61522913	.	-	.	ID=RLOC_00008401;geneIDs=comp147667_c0_seq1.path1;transcripts=comp147667_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61522149	61522913	.	-	.	ID=comp147667_c0_seq1.mrna1;geneID=comp147667_c0_seq1.path1;Name=comp147667_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=760;mismatches=5;indels=0;unknowns=0;Target=comp147667_c0_seq1 765 1 .;CDS_Target=comp147667_c0_seq1 379 230 .;locus=RLOC_00008401
Chr1	stalkie_big_nohaplotig	exon	61522149	61522913	99	-	.	Parent=comp147667_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	61522535	61522684	.	-	0	Parent=comp147667_c0_seq1.mrna1
Chr1	gffcl	locus	61570632	61574730	.	.	.	ID=RLOC_00008402;geneIDs=FBgn0036992.1.path1,comp115805_c0_seq1.path1;transcripts=FBgn0036992.1.mrna1,comp115805_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61570632	61574730	.	+	.	ID=FBgn0036992.1.mrna1;geneID=FBgn0036992.1.path1;Name=FBgn0036992.1;Dir=sensecoverage=100.0;identity=99.8;matches=1147;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008402
Chr1	stalkie_big_nohaplotig	exon	61570632	61570643	100	+	.	Parent=FBgn0036992.1.mrna1;Target=FBgn0036992.1 1 12 +
Chr1	stalkie_big_nohaplotig	exon	61573408	61573434	100	+	.	Parent=FBgn0036992.1.mrna1;Target=FBgn0036992.1 13 39 +
Chr1	stalkie_big_nohaplotig	exon	61573495	61573878	99	+	.	Parent=FBgn0036992.1.mrna1;Target=FBgn0036992.1 40 423 +
Chr1	stalkie_big_nohaplotig	exon	61573947	61574600	100	+	.	Parent=FBgn0036992.1.mrna1;Target=FBgn0036992.1 424 1077 +
Chr1	stalkie_big_nohaplotig	exon	61574659	61574730	100	+	.	Parent=FBgn0036992.1.mrna1;Target=FBgn0036992.1 1078 1149 +
Chr1	stalkie_big_nohaplotig	CDS	61570632	61570643	.	+	0	Parent=FBgn0036992.1.mrna1;Target=FBgn0036992.1 1 12 +
Chr1	stalkie_big_nohaplotig	CDS	61573408	61573434	.	+	0	Parent=FBgn0036992.1.mrna1;Target=FBgn0036992.1 13 39 +
Chr1	stalkie_big_nohaplotig	CDS	61573495	61573878	.	+	0	Parent=FBgn0036992.1.mrna1;Target=FBgn0036992.1 40 423 +
Chr1	stalkie_big_nohaplotig	CDS	61573947	61574600	.	+	0	Parent=FBgn0036992.1.mrna1;Target=FBgn0036992.1 424 1077 +
Chr1	stalkie_big_nohaplotig	CDS	61574659	61574730	.	+	0	Parent=FBgn0036992.1.mrna1;Target=FBgn0036992.1 1078 1149 +
Chr1	stalkie_big_nohaplotig	mRNA	61573146	61573430	.	-	.	ID=comp115805_c0_seq1.mrna1;geneID=comp115805_c0_seq1.path1;Name=comp115805_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.1;matches=269;mismatches=16;indels=7;unknowns=0;Target=comp115805_c0_seq1 292 1 .;CDS_Target=comp115805_c0_seq1 286 176 .;locus=RLOC_00008402
Chr1	stalkie_big_nohaplotig	exon	61573146	61573430	92	-	.	Parent=comp115805_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	61573152	61573262	.	-	0	Parent=comp115805_c0_seq1.mrna1
Chr1	gffcl	locus	61571056	61571435	.	+	.	ID=RLOC_00008403;geneIDs=comp133360_c0_seq1.path1;transcripts=comp133360_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61571056	61571435	.	+	.	ID=comp133360_c0_seq1.mrna1;geneID=comp133360_c0_seq1.path1;Name=comp133360_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=379;mismatches=1;indels=0;unknowns=0;Target=comp133360_c0_seq1 380 1 .;CDS_Target=comp133360_c0_seq1 378 205 .;locus=RLOC_00008403
Chr1	stalkie_big_nohaplotig	exon	61571056	61571435	99	+	.	Parent=comp133360_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	61571260	61571433	.	+	0	Parent=comp133360_c0_seq1.mrna1
Chr1	gffcl	locus	61571917	61572890	.	-	.	ID=RLOC_00008404;geneIDs=comp163531_c1_seq1.path2;transcripts=comp163531_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	61571917	61572890	.	-	.	ID=comp163531_c1_seq1.mrna2;geneID=comp163531_c1_seq1.path2;Name=comp163531_c1_seq1;Dir=indeterminatecoverage=35.9;identity=99.8;matches=972;mismatches=2;indels=0;unknowns=0;Target=comp163531_c1_seq1 2711 1738 .;CDS_Target=comp163531_c1_seq1 2033 1911 .;locus=RLOC_00008404
Chr1	stalkie_big_nohaplotig	exon	61571917	61572890	99	-	.	Parent=comp163531_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	61572595	61572717	.	-	0	Parent=comp163531_c1_seq1.mrna2
Chr1	gffcl	locus	61574903	61577008	.	-	.	ID=RLOC_00008405;geneIDs=FBgn0036991.1.path1;transcripts=FBgn0036991.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61574903	61577008	.	-	.	ID=FBgn0036991.1.mrna1;geneID=FBgn0036991.1.path1;Name=FBgn0036991.1;Dir=sensecoverage=100.0;identity=99.8;matches=1701;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008405
Chr1	stalkie_big_nohaplotig	exon	61574903	61575106	99	-	.	Parent=FBgn0036991.1.mrna1;Target=FBgn0036991.1 1501 1704 +
Chr1	stalkie_big_nohaplotig	exon	61575170	61575488	100	-	.	Parent=FBgn0036991.1.mrna1;Target=FBgn0036991.1 1182 1500 +
Chr1	stalkie_big_nohaplotig	exon	61575545	61575874	100	-	.	Parent=FBgn0036991.1.mrna1;Target=FBgn0036991.1 852 1181 +
Chr1	stalkie_big_nohaplotig	exon	61575925	61576019	100	-	.	Parent=FBgn0036991.1.mrna1;Target=FBgn0036991.1 757 851 +
Chr1	stalkie_big_nohaplotig	exon	61576201	61576856	99	-	.	Parent=FBgn0036991.1.mrna1;Target=FBgn0036991.1 101 756 +
Chr1	stalkie_big_nohaplotig	exon	61576909	61577008	100	-	.	Parent=FBgn0036991.1.mrna1;Target=FBgn0036991.1 1 100 +
Chr1	stalkie_big_nohaplotig	CDS	61574903	61575106	.	-	0	Parent=FBgn0036991.1.mrna1;Target=FBgn0036991.1 1501 1704 +
Chr1	stalkie_big_nohaplotig	CDS	61575170	61575488	.	-	1	Parent=FBgn0036991.1.mrna1;Target=FBgn0036991.1 1182 1500 +
Chr1	stalkie_big_nohaplotig	CDS	61575545	61575874	.	-	1	Parent=FBgn0036991.1.mrna1;Target=FBgn0036991.1 852 1181 +
Chr1	stalkie_big_nohaplotig	CDS	61575925	61576019	.	-	0	Parent=FBgn0036991.1.mrna1;Target=FBgn0036991.1 757 851 +
Chr1	stalkie_big_nohaplotig	CDS	61576201	61576856	.	-	2	Parent=FBgn0036991.1.mrna1;Target=FBgn0036991.1 101 756 +
Chr1	stalkie_big_nohaplotig	CDS	61576909	61577008	.	-	0	Parent=FBgn0036991.1.mrna1;Target=FBgn0036991.1 1 100 +
Chr1	gffcl	locus	61579307	61580304	.	+	.	ID=RLOC_00008406;geneIDs=FBgn0036990.1.path1;transcripts=FBgn0036990.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61579307	61580304	.	+	.	ID=FBgn0036990.1.mrna1;geneID=FBgn0036990.1.path1;Name=FBgn0036990.1;Dir=sensecoverage=100.0;identity=99.9;matches=890;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008406
Chr1	stalkie_big_nohaplotig	exon	61579307	61579435	100	+	.	Parent=FBgn0036990.1.mrna1;Target=FBgn0036990.1 1 129 +
Chr1	stalkie_big_nohaplotig	exon	61579491	61579937	99	+	.	Parent=FBgn0036990.1.mrna1;Target=FBgn0036990.1 130 576 +
Chr1	stalkie_big_nohaplotig	exon	61579990	61580304	100	+	.	Parent=FBgn0036990.1.mrna1;Target=FBgn0036990.1 577 891 +
Chr1	stalkie_big_nohaplotig	CDS	61579307	61579435	.	+	0	Parent=FBgn0036990.1.mrna1;Target=FBgn0036990.1 1 129 +
Chr1	stalkie_big_nohaplotig	CDS	61579491	61579937	.	+	0	Parent=FBgn0036990.1.mrna1;Target=FBgn0036990.1 130 576 +
Chr1	stalkie_big_nohaplotig	CDS	61579990	61580304	.	+	0	Parent=FBgn0036990.1.mrna1;Target=FBgn0036990.1 577 891 +
Chr1	gffcl	locus	61580428	61582583	.	-	.	ID=RLOC_00008407;geneIDs=FBgn0019947.1.path1;transcripts=FBgn0019947.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61580428	61582583	.	-	.	ID=FBgn0019947.1.mrna1;geneID=FBgn0019947.1.path1;Name=FBgn0019947.1;Dir=sensecoverage=100.0;identity=99.9;matches=1547;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008407
Chr1	stalkie_big_nohaplotig	exon	61580428	61580693	100	-	.	Parent=FBgn0019947.1.mrna1;Target=FBgn0019947.1 1283 1548 +
Chr1	stalkie_big_nohaplotig	exon	61580749	61580910	100	-	.	Parent=FBgn0019947.1.mrna1;Target=FBgn0019947.1 1121 1282 +
Chr1	stalkie_big_nohaplotig	exon	61581089	61581262	100	-	.	Parent=FBgn0019947.1.mrna1;Target=FBgn0019947.1 947 1120 +
Chr1	stalkie_big_nohaplotig	exon	61581321	61581419	100	-	.	Parent=FBgn0019947.1.mrna1;Target=FBgn0019947.1 848 946 +
Chr1	stalkie_big_nohaplotig	exon	61581506	61581726	99	-	.	Parent=FBgn0019947.1.mrna1;Target=FBgn0019947.1 627 847 +
Chr1	stalkie_big_nohaplotig	exon	61581780	61581989	100	-	.	Parent=FBgn0019947.1.mrna1;Target=FBgn0019947.1 417 626 +
Chr1	stalkie_big_nohaplotig	exon	61582052	61582326	100	-	.	Parent=FBgn0019947.1.mrna1;Target=FBgn0019947.1 142 416 +
Chr1	stalkie_big_nohaplotig	exon	61582443	61582583	100	-	.	Parent=FBgn0019947.1.mrna1;Target=FBgn0019947.1 1 141 +
Chr1	stalkie_big_nohaplotig	CDS	61580428	61580693	.	-	2	Parent=FBgn0019947.1.mrna1;Target=FBgn0019947.1 1283 1548 +
Chr1	stalkie_big_nohaplotig	CDS	61580749	61580910	.	-	2	Parent=FBgn0019947.1.mrna1;Target=FBgn0019947.1 1121 1282 +
Chr1	stalkie_big_nohaplotig	CDS	61581089	61581262	.	-	2	Parent=FBgn0019947.1.mrna1;Target=FBgn0019947.1 947 1120 +
Chr1	stalkie_big_nohaplotig	CDS	61581321	61581419	.	-	2	Parent=FBgn0019947.1.mrna1;Target=FBgn0019947.1 848 946 +
Chr1	stalkie_big_nohaplotig	CDS	61581506	61581726	.	-	1	Parent=FBgn0019947.1.mrna1;Target=FBgn0019947.1 627 847 +
Chr1	stalkie_big_nohaplotig	CDS	61581780	61581989	.	-	1	Parent=FBgn0019947.1.mrna1;Target=FBgn0019947.1 417 626 +
Chr1	stalkie_big_nohaplotig	CDS	61582052	61582326	.	-	0	Parent=FBgn0019947.1.mrna1;Target=FBgn0019947.1 142 416 +
Chr1	stalkie_big_nohaplotig	CDS	61582443	61582583	.	-	0	Parent=FBgn0019947.1.mrna1;Target=FBgn0019947.1 1 141 +
Chr1	gffcl	locus	61585422	61585792	.	+	.	ID=RLOC_00008409;geneIDs=comp147869_c0_seq1.path1;transcripts=comp147869_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61585422	61585792	.	+	.	ID=comp147869_c0_seq1.mrna1;geneID=comp147869_c0_seq1.path1;Name=comp147869_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.8;matches=368;mismatches=3;indels=17;unknowns=0;Target=comp147869_c0_seq1 388 1 .;CDS_Target=comp147869_c0_seq1 251 165 .;locus=RLOC_00008409
Chr1	stalkie_big_nohaplotig	exon	61585422	61585792	94	+	.	Parent=comp147869_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	61585586	61585670	.	+	0	Parent=comp147869_c0_seq1.mrna1
Chr1	gffcl	locus	61591747	61592489	.	+	.	ID=RLOC_00008411;geneIDs=FBgn0036853.1.path1;transcripts=FBgn0036853.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61591747	61592489	.	+	.	ID=FBgn0036853.1.mrna1;geneID=FBgn0036853.1.path1;Name=FBgn0036853.1;Dir=sensecoverage=100.0;identity=99.9;matches=686;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008411
Chr1	stalkie_big_nohaplotig	exon	61591747	61591903	99	+	.	Parent=FBgn0036853.1.mrna1;Target=FBgn0036853.1 1 157 +
Chr1	stalkie_big_nohaplotig	exon	61591960	61592489	100	+	.	Parent=FBgn0036853.1.mrna1;Target=FBgn0036853.1 158 687 +
Chr1	stalkie_big_nohaplotig	CDS	61591747	61591903	.	+	0	Parent=FBgn0036853.1.mrna1;Target=FBgn0036853.1 1 157 +
Chr1	stalkie_big_nohaplotig	CDS	61591960	61592489	.	+	2	Parent=FBgn0036853.1.mrna1;Target=FBgn0036853.1 158 687 +
Chr1	gffcl	locus	61593619	61599693	.	-	.	ID=RLOC_00008412;geneIDs=FBgn0052425.1.path1;transcripts=FBgn0052425.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61593619	61599693	.	-	.	ID=FBgn0052425.1.mrna1;geneID=FBgn0052425.1.path1;Name=FBgn0052425.1;Dir=sensecoverage=99.7;identity=99.7;matches=2618;mismatches=9;indels=0;unknowns=0;locus=RLOC_00008412
Chr1	stalkie_big_nohaplotig	exon	61593619	61594266	100	-	.	Parent=FBgn0052425.1.mrna1;Target=FBgn0052425.1 1987 2634 +
Chr1	stalkie_big_nohaplotig	exon	61594426	61595103	99	-	.	Parent=FBgn0052425.1.mrna1;Target=FBgn0052425.1 1309 1986 +
Chr1	stalkie_big_nohaplotig	exon	61595166	61595369	100	-	.	Parent=FBgn0052425.1.mrna1;Target=FBgn0052425.1 1105 1308 +
Chr1	stalkie_big_nohaplotig	exon	61595519	61595736	98	-	.	Parent=FBgn0052425.1.mrna1;Target=FBgn0052425.1 887 1104 +
Chr1	stalkie_big_nohaplotig	exon	61598815	61599693	99	-	.	Parent=FBgn0052425.1.mrna1;Target=FBgn0052425.1 8 886 +
Chr1	stalkie_big_nohaplotig	CDS	61593619	61594266	.	-	0	Parent=FBgn0052425.1.mrna1;Target=FBgn0052425.1 1987 2634 +
Chr1	stalkie_big_nohaplotig	CDS	61594426	61595103	.	-	0	Parent=FBgn0052425.1.mrna1;Target=FBgn0052425.1 1309 1986 +
Chr1	stalkie_big_nohaplotig	CDS	61595166	61595369	.	-	0	Parent=FBgn0052425.1.mrna1;Target=FBgn0052425.1 1105 1308 +
Chr1	stalkie_big_nohaplotig	CDS	61595519	61595736	.	-	2	Parent=FBgn0052425.1.mrna1;Target=FBgn0052425.1 887 1104 +
Chr1	stalkie_big_nohaplotig	CDS	61598815	61599691	.	-	0	Parent=FBgn0052425.1.mrna1;Target=FBgn0052425.1 10 886 +
Chr1	gffcl	locus	61601845	61602238	.	-	.	ID=RLOC_00008413;geneIDs=comp140284_c0_seq1.path1;transcripts=comp140284_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61601845	61602238	.	-	.	ID=comp140284_c0_seq1.mrna1;geneID=comp140284_c0_seq1.path1;Name=comp140284_c0_seq1;Dir=indeterminatecoverage=97.3;identity=98.5;matches=388;mismatches=6;indels=0;unknowns=0;Target=comp140284_c0_seq1 396 3 .;CDS_Target=comp140284_c0_seq1 95 3 .;locus=RLOC_00008413
Chr1	stalkie_big_nohaplotig	exon	61601845	61602238	98	-	.	Parent=comp140284_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	61602146	61602238	.	-	0	Parent=comp140284_c0_seq1.mrna1
Chr1	gffcl	locus	61605377	61607623	.	-	.	ID=RLOC_00008414;geneIDs=comp106090_c0_seq1.path1;transcripts=comp106090_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61605377	61607623	.	-	.	ID=comp106090_c0_seq1.mrna1;geneID=comp106090_c0_seq1.path1;Name=comp106090_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=316;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008414
Chr1	stalkie_big_nohaplotig	exon	61605377	61605671	99	-	.	Parent=comp106090_c0_seq1.mrna1;Target=comp106090_c0_seq1 23 317 +
Chr1	stalkie_big_nohaplotig	exon	61607602	61607623	100	-	.	Parent=comp106090_c0_seq1.mrna1;Target=comp106090_c0_seq1 1 22 +
Chr1	stalkie_big_nohaplotig	CDS	61605643	61605671	.	-	2	Parent=comp106090_c0_seq1.mrna1;Target=comp106090_c0_seq1 23 51 +
Chr1	stalkie_big_nohaplotig	CDS	61607602	61607623	.	-	0	Parent=comp106090_c0_seq1.mrna1;Target=comp106090_c0_seq1 1 22 +
Chr1	gffcl	locus	61613351	61614943	.	-	.	ID=RLOC_00008415;geneIDs=FBgn0037001.1.path1;transcripts=FBgn0037001.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61613351	61614943	.	-	.	ID=FBgn0037001.1.mrna1;geneID=FBgn0037001.1.path1;Name=FBgn0037001.1;Dir=sensecoverage=100.0;identity=99.8;matches=1341;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008415
Chr1	stalkie_big_nohaplotig	exon	61613351	61613738	100	-	.	Parent=FBgn0037001.1.mrna1;Target=FBgn0037001.1 957 1344 +
Chr1	stalkie_big_nohaplotig	exon	61613810	61614175	99	-	.	Parent=FBgn0037001.1.mrna1;Target=FBgn0037001.1 591 956 +
Chr1	stalkie_big_nohaplotig	exon	61614231	61614666	99	-	.	Parent=FBgn0037001.1.mrna1;Target=FBgn0037001.1 155 590 +
Chr1	stalkie_big_nohaplotig	exon	61614790	61614943	100	-	.	Parent=FBgn0037001.1.mrna1;Target=FBgn0037001.1 1 154 +
Chr1	stalkie_big_nohaplotig	CDS	61613351	61613738	.	-	1	Parent=FBgn0037001.1.mrna1;Target=FBgn0037001.1 957 1344 +
Chr1	stalkie_big_nohaplotig	CDS	61613810	61614175	.	-	1	Parent=FBgn0037001.1.mrna1;Target=FBgn0037001.1 591 956 +
Chr1	stalkie_big_nohaplotig	CDS	61614231	61614666	.	-	2	Parent=FBgn0037001.1.mrna1;Target=FBgn0037001.1 155 590 +
Chr1	stalkie_big_nohaplotig	CDS	61614790	61614943	.	-	0	Parent=FBgn0037001.1.mrna1;Target=FBgn0037001.1 1 154 +
Chr1	gffcl	locus	61645201	61652390	.	+	.	ID=RLOC_00008416;geneIDs=FBgn0037000.1.path1;transcripts=FBgn0037000.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61645201	61652390	.	+	.	ID=FBgn0037000.1.mrna1;geneID=FBgn0037000.1.path1;Name=FBgn0037000.1;Dir=sensecoverage=100.0;identity=99.6;matches=1589;mismatches=7;indels=0;unknowns=0;locus=RLOC_00008416
Chr1	stalkie_big_nohaplotig	exon	61645201	61645407	100	+	.	Parent=FBgn0037000.1.mrna1;Target=FBgn0037000.1 1 207 +
Chr1	stalkie_big_nohaplotig	exon	61650923	61651622	99	+	.	Parent=FBgn0037000.1.mrna1;Target=FBgn0037000.1 208 907 +
Chr1	stalkie_big_nohaplotig	exon	61651702	61652390	99	+	.	Parent=FBgn0037000.1.mrna1;Target=FBgn0037000.1 908 1596 +
Chr1	stalkie_big_nohaplotig	CDS	61645201	61645407	.	+	0	Parent=FBgn0037000.1.mrna1;Target=FBgn0037000.1 1 207 +
Chr1	stalkie_big_nohaplotig	CDS	61650923	61651622	.	+	0	Parent=FBgn0037000.1.mrna1;Target=FBgn0037000.1 208 907 +
Chr1	stalkie_big_nohaplotig	CDS	61651702	61652390	.	+	2	Parent=FBgn0037000.1.mrna1;Target=FBgn0037000.1 908 1596 +
Chr1	gffcl	locus	61665864	61669486	.	.	.	ID=RLOC_00008418;geneIDs=FBgn0037533.1.path1,comp116669_c0_seq1.path1,comp117353_c0_seq1.path1;transcripts=FBgn0037533.1.mrna1,comp116669_c0_seq1.mrna1,comp117353_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61665864	61669486	.	+	.	ID=FBgn0037533.1.mrna1;geneID=FBgn0037533.1.path1;Name=FBgn0037533.1;Dir=sensecoverage=100.0;identity=99.5;matches=1863;mismatches=6;indels=3;unknowns=0;locus=RLOC_00008418
Chr1	stalkie_big_nohaplotig	exon	61665864	61666029	100	+	.	Parent=FBgn0037533.1.mrna1;Target=FBgn0037533.1 1 166 +
Chr1	stalkie_big_nohaplotig	exon	61667173	61667399	99	+	.	Parent=FBgn0037533.1.mrna1;Target=FBgn0037533.1 167 393 +
Chr1	stalkie_big_nohaplotig	exon	61667582	61668831	99	+	.	Parent=FBgn0037533.1.mrna1;Target=FBgn0037533.1 394 1646 +
Chr1	stalkie_big_nohaplotig	exon	61668915	61668920	100	+	.	Parent=FBgn0037533.1.mrna1;Target=FBgn0037533.1 1647 1652 +
Chr1	stalkie_big_nohaplotig	exon	61669211	61669357	100	+	.	Parent=FBgn0037533.1.mrna1;Target=FBgn0037533.1 1653 1799 +
Chr1	stalkie_big_nohaplotig	exon	61669414	61669486	100	+	.	Parent=FBgn0037533.1.mrna1;Target=FBgn0037533.1 1800 1872 +
Chr1	stalkie_big_nohaplotig	CDS	61665864	61666029	.	+	0	Parent=FBgn0037533.1.mrna1;Target=FBgn0037533.1 1 166 +
Chr1	stalkie_big_nohaplotig	CDS	61667173	61667399	.	+	2	Parent=FBgn0037533.1.mrna1;Target=FBgn0037533.1 167 393 +
Chr1	stalkie_big_nohaplotig	CDS	61667582	61668831	.	+	0	Parent=FBgn0037533.1.mrna1;Target=FBgn0037533.1 394 1646 +
Chr1	stalkie_big_nohaplotig	CDS	61668915	61668920	.	+	1	Parent=FBgn0037533.1.mrna1;Target=FBgn0037533.1 1647 1652 +
Chr1	stalkie_big_nohaplotig	CDS	61669211	61669357	.	+	1	Parent=FBgn0037533.1.mrna1;Target=FBgn0037533.1 1653 1799 +
Chr1	stalkie_big_nohaplotig	CDS	61669414	61669486	.	+	1	Parent=FBgn0037533.1.mrna1;Target=FBgn0037533.1 1800 1872 +
Chr1	stalkie_big_nohaplotig	mRNA	61667377	61667602	.	+	.	ID=comp116669_c0_seq1.mrna1;geneID=comp116669_c0_seq1.path1;Name=comp116669_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=224;mismatches=2;indels=0;unknowns=0;Target=comp116669_c0_seq1 226 1 .;CDS_Target=comp116669_c0_seq1 101 3 .;locus=RLOC_00008418
Chr1	stalkie_big_nohaplotig	exon	61667377	61667602	99	+	.	Parent=comp116669_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	61667379	61667477	.	+	0	Parent=comp116669_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61668809	61669231	.	-	.	ID=comp117353_c0_seq1.mrna1;geneID=comp117353_c0_seq1.path1;Name=comp117353_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=423;mismatches=0;indels=0;unknowns=0;Target=comp117353_c0_seq1 423 1 .;CDS_Target=comp117353_c0_seq1 184 71 .;locus=RLOC_00008418
Chr1	stalkie_big_nohaplotig	exon	61668809	61669231	100	-	.	Parent=comp117353_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	61669048	61669161	.	-	0	Parent=comp117353_c0_seq1.mrna1
Chr1	gffcl	locus	61671843	61676358	.	+	.	ID=RLOC_00008419;geneIDs=ORF2272.path1,comp152624_c0_seq1.path1;transcripts=comp152624_c0_seq1.mrna1,ORF2272.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61671843	61676358	.	+	.	ID=comp152624_c0_seq1.mrna1;geneID=comp152624_c0_seq1.path1;Name=comp152624_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=1811;mismatches=3;indels=1;unknowns=0;locus=RLOC_00008419
Chr1	stalkie_big_nohaplotig	exon	61671843	61672759	99	+	.	Parent=comp152624_c0_seq1.mrna1;Target=comp152624_c0_seq1 1 916 +
Chr1	stalkie_big_nohaplotig	exon	61674409	61674684	100	+	.	Parent=comp152624_c0_seq1.mrna1;Target=comp152624_c0_seq1 917 1192 +
Chr1	stalkie_big_nohaplotig	exon	61675737	61676358	99	+	.	Parent=comp152624_c0_seq1.mrna1;Target=comp152624_c0_seq1 1193 1814 +
Chr1	stalkie_big_nohaplotig	CDS	61672354	61672759	.	+	0	Parent=comp152624_c0_seq1.mrna1;Target=comp152624_c0_seq1 511 916 +
Chr1	stalkie_big_nohaplotig	CDS	61674409	61674684	.	+	2	Parent=comp152624_c0_seq1.mrna1;Target=comp152624_c0_seq1 917 1192 +
Chr1	stalkie_big_nohaplotig	CDS	61675737	61675951	.	+	2	Parent=comp152624_c0_seq1.mrna1;Target=comp152624_c0_seq1 1193 1407 +
Chr1	stalkie_big_nohaplotig	mRNA	61672327	61675948	.	+	.	ID=ORF2272.mrna1;geneID=ORF2272.path1;Name=ORF2272;Dir=sensecoverage=100.0;identity=99.9;matches=884;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008419
Chr1	stalkie_big_nohaplotig	exon	61672327	61672759	100	+	.	Parent=ORF2272.mrna1;Target=ORF2272 1 433 +
Chr1	stalkie_big_nohaplotig	exon	61674409	61674648	100	+	.	Parent=ORF2272.mrna1;Target=ORF2272 434 673 +
Chr1	stalkie_big_nohaplotig	exon	61675737	61675948	99	+	.	Parent=ORF2272.mrna1;Target=ORF2272 674 885 +
Chr1	stalkie_big_nohaplotig	CDS	61672327	61672759	.	+	0	Parent=ORF2272.mrna1;Target=ORF2272 1 433 +
Chr1	stalkie_big_nohaplotig	CDS	61674409	61674648	.	+	2	Parent=ORF2272.mrna1;Target=ORF2272 434 673 +
Chr1	stalkie_big_nohaplotig	CDS	61675737	61675948	.	+	2	Parent=ORF2272.mrna1;Target=ORF2272 674 885 +
Chr1	gffcl	locus	61676918	61677223	.	+	.	ID=RLOC_00008420;geneIDs=comp66870_c0_seq1.path1;transcripts=comp66870_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61676918	61677223	.	+	.	ID=comp66870_c0_seq1.mrna1;geneID=comp66870_c0_seq1.path1;Name=comp66870_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.7;matches=302;mismatches=1;indels=3;unknowns=0;Target=comp66870_c0_seq1 303 1 .;CDS_Target=comp66870_c0_seq1 71 3 .;locus=RLOC_00008420
Chr1	stalkie_big_nohaplotig	exon	61676918	61677223	98	+	.	Parent=comp66870_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	61676920	61676991	.	+	0	Parent=comp66870_c0_seq1.mrna1
Chr1	gffcl	locus	61677233	61677659	.	-	.	ID=RLOC_00008421;geneIDs=comp138621_c0_seq1.path1;transcripts=comp138621_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61677233	61677659	.	-	.	ID=comp138621_c0_seq1.mrna1;geneID=comp138621_c0_seq1.path1;Name=comp138621_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=426;mismatches=1;indels=0;unknowns=0;Target=comp138621_c0_seq1 427 1 .;CDS_Target=comp138621_c0_seq1 199 2 .;locus=RLOC_00008421
Chr1	stalkie_big_nohaplotig	exon	61677233	61677659	99	-	.	Parent=comp138621_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	61677461	61677658	.	-	0	Parent=comp138621_c0_seq1.mrna1
Chr1	gffcl	locus	61678118	61678665	.	+	.	ID=RLOC_00008422;geneIDs=comp149787_c0_seq1.path1;transcripts=comp149787_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61678118	61678665	.	+	.	ID=comp149787_c0_seq1.mrna1;geneID=comp149787_c0_seq1.path1;Name=comp149787_c0_seq1;Dir=indeterminatecoverage=95.0;identity=88.6;matches=450;mismatches=24;indels=34;unknowns=0;Target=comp149787_c0_seq1 434 333 .;locus=RLOC_00008422
Chr1	stalkie_big_nohaplotig	exon	61678118	61678397	91	+	.	Parent=comp149787_c0_seq1.mrna1;Target=comp149787_c0_seq1 295 1 .
Chr1	stalkie_big_nohaplotig	exon	61678464	61678665	84	+	.	Parent=comp149787_c0_seq1.mrna1;Target=comp149787_c0_seq1 527 323 .
Chr1	stalkie_big_nohaplotig	CDS	61678474	61678564	.	+	0	Parent=comp149787_c0_seq1.mrna1
Chr1	gffcl	locus	61679192	61689943	.	-	.	ID=RLOC_00008423;geneIDs=FBgn0036997.1.path1;transcripts=FBgn0036997.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61679192	61689943	.	-	.	ID=FBgn0036997.1.mrna1;geneID=FBgn0036997.1.path1;Name=FBgn0036997.1;Dir=sensecoverage=100.0;identity=99.9;matches=1169;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008423
Chr1	stalkie_big_nohaplotig	exon	61679192	61679513	100	-	.	Parent=FBgn0036997.1.mrna1;Target=FBgn0036997.1 849 1170 +
Chr1	stalkie_big_nohaplotig	exon	61679583	61679688	100	-	.	Parent=FBgn0036997.1.mrna1;Target=FBgn0036997.1 743 848 +
Chr1	stalkie_big_nohaplotig	exon	61683042	61683189	100	-	.	Parent=FBgn0036997.1.mrna1;Target=FBgn0036997.1 595 742 +
Chr1	stalkie_big_nohaplotig	exon	61683252	61683378	99	-	.	Parent=FBgn0036997.1.mrna1;Target=FBgn0036997.1 468 594 +
Chr1	stalkie_big_nohaplotig	exon	61683667	61683916	100	-	.	Parent=FBgn0036997.1.mrna1;Target=FBgn0036997.1 218 467 +
Chr1	stalkie_big_nohaplotig	exon	61689727	61689943	100	-	.	Parent=FBgn0036997.1.mrna1;Target=FBgn0036997.1 1 217 +
Chr1	stalkie_big_nohaplotig	CDS	61679192	61679513	.	-	1	Parent=FBgn0036997.1.mrna1;Target=FBgn0036997.1 849 1170 +
Chr1	stalkie_big_nohaplotig	CDS	61679583	61679688	.	-	2	Parent=FBgn0036997.1.mrna1;Target=FBgn0036997.1 743 848 +
Chr1	stalkie_big_nohaplotig	CDS	61683042	61683189	.	-	0	Parent=FBgn0036997.1.mrna1;Target=FBgn0036997.1 595 742 +
Chr1	stalkie_big_nohaplotig	CDS	61683252	61683378	.	-	1	Parent=FBgn0036997.1.mrna1;Target=FBgn0036997.1 468 594 +
Chr1	stalkie_big_nohaplotig	CDS	61683667	61683916	.	-	2	Parent=FBgn0036997.1.mrna1;Target=FBgn0036997.1 218 467 +
Chr1	stalkie_big_nohaplotig	CDS	61689727	61689943	.	-	0	Parent=FBgn0036997.1.mrna1;Target=FBgn0036997.1 1 217 +
Chr1	gffcl	locus	61685526	61686047	.	-	.	ID=RLOC_00008424;geneIDs=comp145404_c0_seq1.path1;transcripts=comp145404_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61685526	61686047	.	-	.	ID=comp145404_c0_seq1.mrna1;geneID=comp145404_c0_seq1.path1;Name=comp145404_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=515;mismatches=7;indels=7;unknowns=0;Target=comp145404_c0_seq1 529 1 .;CDS_Target=comp145404_c0_seq1 273 214 .;locus=RLOC_00008424
Chr1	stalkie_big_nohaplotig	exon	61685526	61686047	97	-	.	Parent=comp145404_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	61685775	61685834	.	-	0	Parent=comp145404_c0_seq1.mrna1
Chr1	gffcl	locus	61757218	61767531	.	+	.	ID=RLOC_00008425;geneIDs=FBgn0037092.1.path1;transcripts=FBgn0037092.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61757218	61767531	.	+	.	ID=FBgn0037092.1.mrna1;geneID=FBgn0037092.1.path1;Name=FBgn0037092.1;Dir=sensecoverage=100.0;identity=99.9;matches=995;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008425
Chr1	stalkie_big_nohaplotig	exon	61757218	61757473	100	+	.	Parent=FBgn0037092.1.mrna1;Target=FBgn0037092.1 1 256 +
Chr1	stalkie_big_nohaplotig	exon	61763475	61763634	100	+	.	Parent=FBgn0037092.1.mrna1;Target=FBgn0037092.1 257 416 +
Chr1	stalkie_big_nohaplotig	exon	61763790	61763949	100	+	.	Parent=FBgn0037092.1.mrna1;Target=FBgn0037092.1 417 576 +
Chr1	stalkie_big_nohaplotig	exon	61764307	61764451	99	+	.	Parent=FBgn0037092.1.mrna1;Target=FBgn0037092.1 577 721 +
Chr1	stalkie_big_nohaplotig	exon	61767257	61767531	100	+	.	Parent=FBgn0037092.1.mrna1;Target=FBgn0037092.1 722 996 +
Chr1	stalkie_big_nohaplotig	CDS	61757218	61757473	.	+	0	Parent=FBgn0037092.1.mrna1;Target=FBgn0037092.1 1 256 +
Chr1	stalkie_big_nohaplotig	CDS	61763475	61763634	.	+	2	Parent=FBgn0037092.1.mrna1;Target=FBgn0037092.1 257 416 +
Chr1	stalkie_big_nohaplotig	CDS	61763790	61763949	.	+	1	Parent=FBgn0037092.1.mrna1;Target=FBgn0037092.1 417 576 +
Chr1	stalkie_big_nohaplotig	CDS	61764307	61764451	.	+	0	Parent=FBgn0037092.1.mrna1;Target=FBgn0037092.1 577 721 +
Chr1	stalkie_big_nohaplotig	CDS	61767257	61767531	.	+	2	Parent=FBgn0037092.1.mrna1;Target=FBgn0037092.1 722 996 +
Chr1	gffcl	locus	61776472	61780787	.	+	.	ID=RLOC_00008427;geneIDs=FBgn0037093.1.path1;transcripts=FBgn0037093.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61776472	61780787	.	+	.	ID=FBgn0037093.1.mrna1;geneID=FBgn0037093.1.path1;Name=FBgn0037093.1;Dir=sensecoverage=100.0;identity=100.0;matches=3507;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008427
Chr1	stalkie_big_nohaplotig	exon	61776472	61776740	100	+	.	Parent=FBgn0037093.1.mrna1;Target=FBgn0037093.1 1 269 +
Chr1	stalkie_big_nohaplotig	exon	61777071	61777213	100	+	.	Parent=FBgn0037093.1.mrna1;Target=FBgn0037093.1 270 412 +
Chr1	stalkie_big_nohaplotig	exon	61777268	61778035	100	+	.	Parent=FBgn0037093.1.mrna1;Target=FBgn0037093.1 413 1180 +
Chr1	stalkie_big_nohaplotig	exon	61778088	61778268	100	+	.	Parent=FBgn0037093.1.mrna1;Target=FBgn0037093.1 1181 1361 +
Chr1	stalkie_big_nohaplotig	exon	61778335	61778752	100	+	.	Parent=FBgn0037093.1.mrna1;Target=FBgn0037093.1 1362 1779 +
Chr1	stalkie_big_nohaplotig	exon	61778807	61779532	100	+	.	Parent=FBgn0037093.1.mrna1;Target=FBgn0037093.1 1780 2505 +
Chr1	stalkie_big_nohaplotig	exon	61779672	61780060	100	+	.	Parent=FBgn0037093.1.mrna1;Target=FBgn0037093.1 2506 2894 +
Chr1	stalkie_big_nohaplotig	exon	61780120	61780593	100	+	.	Parent=FBgn0037093.1.mrna1;Target=FBgn0037093.1 2895 3368 +
Chr1	stalkie_big_nohaplotig	exon	61780649	61780787	100	+	.	Parent=FBgn0037093.1.mrna1;Target=FBgn0037093.1 3369 3507 +
Chr1	stalkie_big_nohaplotig	CDS	61776472	61776740	.	+	0	Parent=FBgn0037093.1.mrna1;Target=FBgn0037093.1 1 269 +
Chr1	stalkie_big_nohaplotig	CDS	61777071	61777213	.	+	1	Parent=FBgn0037093.1.mrna1;Target=FBgn0037093.1 270 412 +
Chr1	stalkie_big_nohaplotig	CDS	61777268	61778035	.	+	2	Parent=FBgn0037093.1.mrna1;Target=FBgn0037093.1 413 1180 +
Chr1	stalkie_big_nohaplotig	CDS	61778088	61778268	.	+	2	Parent=FBgn0037093.1.mrna1;Target=FBgn0037093.1 1181 1361 +
Chr1	stalkie_big_nohaplotig	CDS	61778335	61778752	.	+	1	Parent=FBgn0037093.1.mrna1;Target=FBgn0037093.1 1362 1779 +
Chr1	stalkie_big_nohaplotig	CDS	61778807	61779532	.	+	0	Parent=FBgn0037093.1.mrna1;Target=FBgn0037093.1 1780 2505 +
Chr1	stalkie_big_nohaplotig	CDS	61779672	61780060	.	+	0	Parent=FBgn0037093.1.mrna1;Target=FBgn0037093.1 2506 2894 +
Chr1	stalkie_big_nohaplotig	CDS	61780120	61780593	.	+	1	Parent=FBgn0037093.1.mrna1;Target=FBgn0037093.1 2895 3368 +
Chr1	stalkie_big_nohaplotig	CDS	61780649	61780787	.	+	1	Parent=FBgn0037093.1.mrna1;Target=FBgn0037093.1 3369 3507 +
Chr1	gffcl	locus	61785745	61788749	.	+	.	ID=RLOC_00008428;geneIDs=FBgn0037094.1.path1;transcripts=FBgn0037094.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61785745	61788749	.	+	.	ID=FBgn0037094.1.mrna1;geneID=FBgn0037094.1.path1;Name=FBgn0037094.1;Dir=sensecoverage=100.0;identity=100.0;matches=2208;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008428
Chr1	stalkie_big_nohaplotig	exon	61785745	61786518	100	+	.	Parent=FBgn0037094.1.mrna1;Target=FBgn0037094.1 1 774 +
Chr1	stalkie_big_nohaplotig	exon	61787230	61788182	100	+	.	Parent=FBgn0037094.1.mrna1;Target=FBgn0037094.1 775 1727 +
Chr1	stalkie_big_nohaplotig	exon	61788269	61788749	100	+	.	Parent=FBgn0037094.1.mrna1;Target=FBgn0037094.1 1728 2208 +
Chr1	stalkie_big_nohaplotig	CDS	61785745	61786518	.	+	0	Parent=FBgn0037094.1.mrna1;Target=FBgn0037094.1 1 774 +
Chr1	stalkie_big_nohaplotig	CDS	61787230	61788182	.	+	0	Parent=FBgn0037094.1.mrna1;Target=FBgn0037094.1 775 1727 +
Chr1	stalkie_big_nohaplotig	CDS	61788269	61788749	.	+	1	Parent=FBgn0037094.1.mrna1;Target=FBgn0037094.1 1728 2208 +
Chr1	gffcl	locus	61789123	61789898	.	-	.	ID=RLOC_00008429;geneIDs=comp130170_c0_seq1.path1;transcripts=comp130170_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61789123	61789898	.	-	.	ID=comp130170_c0_seq1.mrna1;geneID=comp130170_c0_seq1.path1;Name=comp130170_c0_seq1;Dir=indeterminatecoverage=98.1;identity=99.2;matches=771;mismatches=5;indels=1;unknowns=0;Target=comp130170_c0_seq1 792 16 .;CDS_Target=comp130170_c0_seq1 142 17 .;locus=RLOC_00008429
Chr1	stalkie_big_nohaplotig	exon	61789123	61789898	99	-	.	Parent=comp130170_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	61789772	61789897	.	-	0	Parent=comp130170_c0_seq1.mrna1
Chr1	gffcl	locus	61789952	61794592	.	-	.	ID=RLOC_00008430;geneIDs=FBgn0052442.1.path1,comp153627_c1_seq1.path1;transcripts=comp153627_c1_seq1.mrna1,FBgn0052442.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61789952	61794592	.	-	.	ID=comp153627_c1_seq1.mrna1;geneID=comp153627_c1_seq1.path1;Name=comp153627_c1_seq1;Dir=sensecoverage=97.0;identity=99.8;matches=1089;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008430
Chr1	stalkie_big_nohaplotig	exon	61789952	61790311	100	-	.	Parent=comp153627_c1_seq1.mrna1;Target=comp153627_c1_seq1 766 1125 +
Chr1	stalkie_big_nohaplotig	exon	61790373	61790530	100	-	.	Parent=comp153627_c1_seq1.mrna1;Target=comp153627_c1_seq1 608 765 +
Chr1	stalkie_big_nohaplotig	exon	61792787	61792906	100	-	.	Parent=comp153627_c1_seq1.mrna1;Target=comp153627_c1_seq1 488 607 +
Chr1	stalkie_big_nohaplotig	exon	61792962	61793193	100	-	.	Parent=comp153627_c1_seq1.mrna1;Target=comp153627_c1_seq1 256 487 +
Chr1	stalkie_big_nohaplotig	exon	61794372	61794592	99	-	.	Parent=comp153627_c1_seq1.mrna1;Target=comp153627_c1_seq1 35 255 +
Chr1	stalkie_big_nohaplotig	CDS	61790447	61790530	.	-	0	Parent=comp153627_c1_seq1.mrna1;Target=comp153627_c1_seq1 608 691 +
Chr1	stalkie_big_nohaplotig	CDS	61792787	61792906	.	-	0	Parent=comp153627_c1_seq1.mrna1;Target=comp153627_c1_seq1 488 607 +
Chr1	stalkie_big_nohaplotig	CDS	61792962	61793069	.	-	0	Parent=comp153627_c1_seq1.mrna1;Target=comp153627_c1_seq1 380 487 +
Chr1	stalkie_big_nohaplotig	mRNA	61789968	61793093	.	-	.	ID=FBgn0052442.1.mrna1;geneID=FBgn0052442.1.path1;Name=FBgn0052442.1;Dir=sensecoverage=100.0;identity=100.0;matches=741;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008430
Chr1	stalkie_big_nohaplotig	exon	61789968	61790311	100	-	.	Parent=FBgn0052442.1.mrna1;Target=FBgn0052442.1 398 741 +
Chr1	stalkie_big_nohaplotig	exon	61790373	61790517	100	-	.	Parent=FBgn0052442.1.mrna1;Target=FBgn0052442.1 253 397 +
Chr1	stalkie_big_nohaplotig	exon	61792787	61792906	100	-	.	Parent=FBgn0052442.1.mrna1;Target=FBgn0052442.1 133 252 +
Chr1	stalkie_big_nohaplotig	exon	61792962	61793093	100	-	.	Parent=FBgn0052442.1.mrna1;Target=FBgn0052442.1 1 132 +
Chr1	stalkie_big_nohaplotig	CDS	61789968	61790311	.	-	2	Parent=FBgn0052442.1.mrna1;Target=FBgn0052442.1 398 741 +
Chr1	stalkie_big_nohaplotig	CDS	61790373	61790517	.	-	0	Parent=FBgn0052442.1.mrna1;Target=FBgn0052442.1 253 397 +
Chr1	stalkie_big_nohaplotig	CDS	61792787	61792906	.	-	0	Parent=FBgn0052442.1.mrna1;Target=FBgn0052442.1 133 252 +
Chr1	stalkie_big_nohaplotig	CDS	61792962	61793093	.	-	0	Parent=FBgn0052442.1.mrna1;Target=FBgn0052442.1 1 132 +
Chr1	gffcl	locus	61797265	62578931	.	+	.	ID=RLOC_00008431;geneIDs=comp151744_c0_seq1.path1;transcripts=comp151744_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61797265	62578931	.	+	.	ID=comp151744_c0_seq1.mrna1;geneID=comp151744_c0_seq1.path1;Name=comp151744_c0_seq1;Dir=indeterminatecoverage=95.3;identity=99.3;matches=1243;mismatches=8;indels=1;unknowns=0;Target=comp151744_c0_seq1 345 220 .;locus=RLOC_00008431
Chr1	stalkie_big_nohaplotig	exon	61797265	61798462	99	+	.	Parent=comp151744_c0_seq1.mrna1;Target=comp151744_c0_seq1 1199 2 .
Chr1	stalkie_big_nohaplotig	exon	62559320	62559328	100	+	.	Parent=comp151744_c0_seq1.mrna1;Target=comp151744_c0_seq1 1208 1200 .
Chr1	stalkie_big_nohaplotig	exon	62564646	62564656	90	+	.	Parent=comp151744_c0_seq1.mrna1;Target=comp151744_c0_seq1 1219 1209 .
Chr1	stalkie_big_nohaplotig	exon	62570695	62570705	90	+	.	Parent=comp151744_c0_seq1.mrna1;Target=comp151744_c0_seq1 1230 1220 .
Chr1	stalkie_big_nohaplotig	exon	62570934	62570942	66	+	.	Parent=comp151744_c0_seq1.mrna1;Target=comp151744_c0_seq1 1238 1231 .
Chr1	stalkie_big_nohaplotig	exon	62571040	62571049	100	+	.	Parent=comp151744_c0_seq1.mrna1;Target=comp151744_c0_seq1 1248 1239 .
Chr1	stalkie_big_nohaplotig	exon	62578928	62578931	100	+	.	Parent=comp151744_c0_seq1.mrna1;Target=comp151744_c0_seq1 1252 1249 .
Chr1	stalkie_big_nohaplotig	CDS	61797483	61797608	.	+	0	Parent=comp151744_c0_seq1.mrna1
Chr1	gffcl	locus	61799487	61799777	.	+	.	ID=RLOC_00008432;geneIDs=comp113209_c0_seq1.path1;transcripts=comp113209_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61799487	61799777	.	+	.	ID=comp113209_c0_seq1.mrna1;geneID=comp113209_c0_seq1.path1;Name=comp113209_c0_seq1;Dir=indeterminatecoverage=95.4;identity=98.6;matches=287;mismatches=4;indels=0;unknowns=0;Target=comp113209_c0_seq1 305 15 .;CDS_Target=comp113209_c0_seq1 158 15 .;locus=RLOC_00008432
Chr1	stalkie_big_nohaplotig	exon	61799487	61799777	98	+	.	Parent=comp113209_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	61799487	61799630	.	+	0	Parent=comp113209_c0_seq1.mrna1
Chr1	gffcl	locus	61800140	61803763	.	-	.	ID=RLOC_00008433;geneIDs=FBgn0029152.1.path1;transcripts=FBgn0029152.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61800140	61803763	.	-	.	ID=FBgn0029152.1.mrna1;geneID=FBgn0029152.1.path1;Name=FBgn0029152.1;Dir=sensecoverage=100.0;identity=99.8;matches=1138;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008433
Chr1	stalkie_big_nohaplotig	exon	61800140	61800232	100	-	.	Parent=FBgn0029152.1.mrna1;Target=FBgn0029152.1 1048 1140 +
Chr1	stalkie_big_nohaplotig	exon	61801853	61801993	99	-	.	Parent=FBgn0029152.1.mrna1;Target=FBgn0029152.1 907 1047 +
Chr1	stalkie_big_nohaplotig	exon	61802075	61802213	100	-	.	Parent=FBgn0029152.1.mrna1;Target=FBgn0029152.1 768 906 +
Chr1	stalkie_big_nohaplotig	exon	61802997	61803763	99	-	.	Parent=FBgn0029152.1.mrna1;Target=FBgn0029152.1 1 767 +
Chr1	stalkie_big_nohaplotig	CDS	61800140	61800232	.	-	0	Parent=FBgn0029152.1.mrna1;Target=FBgn0029152.1 1048 1140 +
Chr1	stalkie_big_nohaplotig	CDS	61801853	61801993	.	-	0	Parent=FBgn0029152.1.mrna1;Target=FBgn0029152.1 907 1047 +
Chr1	stalkie_big_nohaplotig	CDS	61802075	61802213	.	-	1	Parent=FBgn0029152.1.mrna1;Target=FBgn0029152.1 768 906 +
Chr1	stalkie_big_nohaplotig	CDS	61802997	61803763	.	-	0	Parent=FBgn0029152.1.mrna1;Target=FBgn0029152.1 1 767 +
Chr1	gffcl	locus	61805906	61805946	.	+	.	ID=RLOC_00008434;geneIDs=comp156083_c0_seq1.path1;transcripts=comp156083_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61805906	61805946	.	+	.	ID=comp156083_c0_seq1.mrna1;geneID=comp156083_c0_seq1.path1;Name=comp156083_c0_seq1;Dir=indeterminatecoverage=3.3;identity=100.0;matches=41;mismatches=0;indels=0;unknowns=0;Target=comp156083_c0_seq1 41 1 .;locus=RLOC_00008434
Chr1	stalkie_big_nohaplotig	exon	61805906	61805946	100	+	.	Parent=comp156083_c0_seq1.mrna1
Chr1	gffcl	locus	61807096	61807424	.	+	.	ID=RLOC_00008435;geneIDs=FBgn0263911.1.path1;transcripts=FBgn0263911.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61807096	61807424	.	+	.	ID=FBgn0263911.1.mrna1;geneID=FBgn0263911.1.path1;Name=FBgn0263911.1;Dir=sensecoverage=100.0;identity=100.0;matches=270;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008435
Chr1	stalkie_big_nohaplotig	exon	61807096	61807272	100	+	.	Parent=FBgn0263911.1.mrna1;Target=FBgn0263911.1 1 177 +
Chr1	stalkie_big_nohaplotig	exon	61807332	61807424	100	+	.	Parent=FBgn0263911.1.mrna1;Target=FBgn0263911.1 178 270 +
Chr1	stalkie_big_nohaplotig	CDS	61807096	61807272	.	+	0	Parent=FBgn0263911.1.mrna1;Target=FBgn0263911.1 1 177 +
Chr1	stalkie_big_nohaplotig	CDS	61807332	61807424	.	+	0	Parent=FBgn0263911.1.mrna1;Target=FBgn0263911.1 178 270 +
Chr1	gffcl	locus	61807946	61809591	.	-	.	ID=RLOC_00008436;geneIDs=FBgn0015283.1.path1;transcripts=FBgn0015283.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61807946	61809591	.	-	.	ID=FBgn0015283.1.mrna1;geneID=FBgn0015283.1.path1;Name=FBgn0015283.1;Dir=sensecoverage=100.0;identity=99.8;matches=1243;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008436
Chr1	stalkie_big_nohaplotig	exon	61807946	61808059	100	-	.	Parent=FBgn0015283.1.mrna1;Target=FBgn0015283.1 1132 1245 +
Chr1	stalkie_big_nohaplotig	exon	61808124	61808230	100	-	.	Parent=FBgn0015283.1.mrna1;Target=FBgn0015283.1 1025 1131 +
Chr1	stalkie_big_nohaplotig	exon	61808288	61808372	100	-	.	Parent=FBgn0015283.1.mrna1;Target=FBgn0015283.1 940 1024 +
Chr1	stalkie_big_nohaplotig	exon	61808431	61809015	99	-	.	Parent=FBgn0015283.1.mrna1;Target=FBgn0015283.1 355 939 +
Chr1	stalkie_big_nohaplotig	exon	61809069	61809183	100	-	.	Parent=FBgn0015283.1.mrna1;Target=FBgn0015283.1 240 354 +
Chr1	stalkie_big_nohaplotig	exon	61809242	61809382	100	-	.	Parent=FBgn0015283.1.mrna1;Target=FBgn0015283.1 99 239 +
Chr1	stalkie_big_nohaplotig	exon	61809494	61809591	100	-	.	Parent=FBgn0015283.1.mrna1;Target=FBgn0015283.1 1 98 +
Chr1	stalkie_big_nohaplotig	CDS	61807946	61808059	.	-	0	Parent=FBgn0015283.1.mrna1;Target=FBgn0015283.1 1132 1245 +
Chr1	stalkie_big_nohaplotig	CDS	61808124	61808230	.	-	2	Parent=FBgn0015283.1.mrna1;Target=FBgn0015283.1 1025 1131 +
Chr1	stalkie_big_nohaplotig	CDS	61808288	61808372	.	-	0	Parent=FBgn0015283.1.mrna1;Target=FBgn0015283.1 940 1024 +
Chr1	stalkie_big_nohaplotig	CDS	61808431	61809015	.	-	0	Parent=FBgn0015283.1.mrna1;Target=FBgn0015283.1 355 939 +
Chr1	stalkie_big_nohaplotig	CDS	61809069	61809183	.	-	1	Parent=FBgn0015283.1.mrna1;Target=FBgn0015283.1 240 354 +
Chr1	stalkie_big_nohaplotig	CDS	61809242	61809382	.	-	1	Parent=FBgn0015283.1.mrna1;Target=FBgn0015283.1 99 239 +
Chr1	stalkie_big_nohaplotig	CDS	61809494	61809591	.	-	0	Parent=FBgn0015283.1.mrna1;Target=FBgn0015283.1 1 98 +
Chr1	gffcl	locus	61813670	61814144	.	+	.	ID=RLOC_00008437;geneIDs=FBgn0028663.1.path1;transcripts=FBgn0028663.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61813670	61814144	.	+	.	ID=FBgn0028663.1.mrna1;geneID=FBgn0028663.1.path1;Name=FBgn0028663.1;Dir=sensecoverage=100.0;identity=100.0;matches=285;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008437
Chr1	stalkie_big_nohaplotig	exon	61813670	61813779	100	+	.	Parent=FBgn0028663.1.mrna1;Target=FBgn0028663.1 1 110 +
Chr1	stalkie_big_nohaplotig	exon	61813906	61813953	100	+	.	Parent=FBgn0028663.1.mrna1;Target=FBgn0028663.1 111 158 +
Chr1	stalkie_big_nohaplotig	exon	61814018	61814144	100	+	.	Parent=FBgn0028663.1.mrna1;Target=FBgn0028663.1 159 285 +
Chr1	stalkie_big_nohaplotig	CDS	61813670	61813779	.	+	0	Parent=FBgn0028663.1.mrna1;Target=FBgn0028663.1 1 110 +
Chr1	stalkie_big_nohaplotig	CDS	61813906	61813953	.	+	1	Parent=FBgn0028663.1.mrna1;Target=FBgn0028663.1 111 158 +
Chr1	stalkie_big_nohaplotig	CDS	61814018	61814144	.	+	1	Parent=FBgn0028663.1.mrna1;Target=FBgn0028663.1 159 285 +
Chr1	gffcl	locus	61816420	61817630	.	-	.	ID=RLOC_00008438;geneIDs=FBgn0000100.1.path1;transcripts=FBgn0000100.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61816420	61817630	.	-	.	ID=FBgn0000100.1.mrna1;geneID=FBgn0000100.1.path1;Name=FBgn0000100.1;Dir=sensecoverage=100.0;identity=99.9;matches=986;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008438
Chr1	stalkie_big_nohaplotig	exon	61816420	61817313	99	-	.	Parent=FBgn0000100.1.mrna1;Target=FBgn0000100.1 94 987 +
Chr1	stalkie_big_nohaplotig	exon	61817538	61817630	100	-	.	Parent=FBgn0000100.1.mrna1;Target=FBgn0000100.1 1 93 +
Chr1	stalkie_big_nohaplotig	CDS	61816420	61817313	.	-	0	Parent=FBgn0000100.1.mrna1;Target=FBgn0000100.1 94 987 +
Chr1	stalkie_big_nohaplotig	CDS	61817538	61817630	.	-	0	Parent=FBgn0000100.1.mrna1;Target=FBgn0000100.1 1 93 +
Chr1	gffcl	locus	61820792	61862575	.	+	.	ID=RLOC_00008439;geneIDs=FBgn0015075.1.path1;transcripts=FBgn0015075.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61820792	61862575	.	+	.	ID=FBgn0015075.1.mrna1;geneID=FBgn0015075.1.path1;Name=FBgn0015075.1;Dir=sensecoverage=74.2;identity=99.7;matches=1742;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008439
Chr1	stalkie_big_nohaplotig	exon	61820792	61820855	100	+	.	Parent=FBgn0015075.1.mrna1;Target=FBgn0015075.1 1 64 +
Chr1	stalkie_big_nohaplotig	exon	61820916	61820967	100	+	.	Parent=FBgn0015075.1.mrna1;Target=FBgn0015075.1 65 116 +
Chr1	stalkie_big_nohaplotig	exon	61821021	61822046	99	+	.	Parent=FBgn0015075.1.mrna1;Target=FBgn0015075.1 117 1142 +
Chr1	stalkie_big_nohaplotig	exon	61822119	61822685	99	+	.	Parent=FBgn0015075.1.mrna1;Target=FBgn0015075.1 1143 1709 +
Chr1	stalkie_big_nohaplotig	exon	61826672	61826674	100	+	.	Parent=FBgn0015075.1.mrna1;Target=FBgn0015075.1 1710 1712 +
Chr1	stalkie_big_nohaplotig	exon	61832679	61832684	100	+	.	Parent=FBgn0015075.1.mrna1;Target=FBgn0015075.1 1713 1718 +
Chr1	stalkie_big_nohaplotig	exon	61836840	61836843	100	+	.	Parent=FBgn0015075.1.mrna1;Target=FBgn0015075.1 1719 1722 +
Chr1	stalkie_big_nohaplotig	exon	61854222	61854223	100	+	.	Parent=FBgn0015075.1.mrna1;Target=FBgn0015075.1 1723 1724 +
Chr1	stalkie_big_nohaplotig	exon	61859255	61859257	100	+	.	Parent=FBgn0015075.1.mrna1;Target=FBgn0015075.1 1725 1727 +
Chr1	stalkie_big_nohaplotig	exon	61862555	61862575	90	+	.	Parent=FBgn0015075.1.mrna1;Target=FBgn0015075.1 1728 1748 +
Chr1	stalkie_big_nohaplotig	CDS	61820792	61820855	.	+	0	Parent=FBgn0015075.1.mrna1;Target=FBgn0015075.1 1 64 +
Chr1	stalkie_big_nohaplotig	CDS	61820916	61820967	.	+	2	Parent=FBgn0015075.1.mrna1;Target=FBgn0015075.1 65 116 +
Chr1	stalkie_big_nohaplotig	CDS	61821021	61822046	.	+	1	Parent=FBgn0015075.1.mrna1;Target=FBgn0015075.1 117 1142 +
Chr1	stalkie_big_nohaplotig	CDS	61822119	61822685	.	+	1	Parent=FBgn0015075.1.mrna1;Target=FBgn0015075.1 1143 1709 +
Chr1	stalkie_big_nohaplotig	CDS	61826672	61826674	.	+	1	Parent=FBgn0015075.1.mrna1;Target=FBgn0015075.1 1710 1712 +
Chr1	stalkie_big_nohaplotig	CDS	61832679	61832684	.	+	1	Parent=FBgn0015075.1.mrna1;Target=FBgn0015075.1 1713 1718 +
Chr1	stalkie_big_nohaplotig	CDS	61836840	61836843	.	+	1	Parent=FBgn0015075.1.mrna1;Target=FBgn0015075.1 1719 1722 +
Chr1	stalkie_big_nohaplotig	CDS	61854222	61854223	.	+	0	Parent=FBgn0015075.1.mrna1;Target=FBgn0015075.1 1723 1724 +
Chr1	stalkie_big_nohaplotig	CDS	61859255	61859257	.	+	1	Parent=FBgn0015075.1.mrna1;Target=FBgn0015075.1 1725 1727 +
Chr1	stalkie_big_nohaplotig	CDS	61862555	61862575	.	+	1	Parent=FBgn0015075.1.mrna1;Target=FBgn0015075.1 1728 1748 +
Chr1	stalkie_big_nohaplotig	mRNA	61850961	61851307	.	-	.	ID=comp113652_c0_seq1.mrna1;geneID=comp113652_c0_seq1.path1;Name=comp113652_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=345;mismatches=2;indels=0;unknowns=0;Target=comp113652_c0_seq1 347 1 .;CDS_Target=comp113652_c0_seq1 214 107 .;locus=RLOC_00008441
Chr1	stalkie_big_nohaplotig	exon	61850961	61851307	99	-	.	Parent=comp113652_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	61851094	61851201	.	-	0	Parent=comp113652_c0_seq1.mrna1
Chr1	gffcl	locus	61856143	61857059	.	-	.	ID=RLOC_00008442;geneIDs=ORF2447.path1;transcripts=ORF2447.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61856143	61857059	.	-	.	ID=ORF2447.mrna1;geneID=ORF2447.path1;Name=ORF2447;Dir=sensecoverage=100.0;identity=99.0;matches=849;mismatches=9;indels=0;unknowns=0;locus=RLOC_00008442
Chr1	stalkie_big_nohaplotig	exon	61856143	61856946	99	-	.	Parent=ORF2447.mrna1;Target=ORF2447 55 858 +
Chr1	stalkie_big_nohaplotig	exon	61857006	61857059	98	-	.	Parent=ORF2447.mrna1;Target=ORF2447 1 54 +
Chr1	stalkie_big_nohaplotig	CDS	61856143	61856946	.	-	0	Parent=ORF2447.mrna1;Target=ORF2447 55 858 +
Chr1	stalkie_big_nohaplotig	CDS	61857006	61857059	.	-	0	Parent=ORF2447.mrna1;Target=ORF2447 1 54 +
Chr1	gffcl	locus	61860174	61861710	.	-	.	ID=RLOC_00008443;geneIDs=FBgn0036362.2.path1;transcripts=FBgn0036362.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61860174	61861710	.	-	.	ID=FBgn0036362.2.mrna1;geneID=FBgn0036362.2.path1;Name=FBgn0036362.2;Dir=sensecoverage=100.0;identity=99.0;matches=814;mismatches=8;indels=0;unknowns=0;locus=RLOC_00008443
Chr1	stalkie_big_nohaplotig	exon	61860174	61860389	100	-	.	Parent=FBgn0036362.2.mrna1;Target=FBgn0036362.2 607 822 +
Chr1	stalkie_big_nohaplotig	exon	61861041	61861612	98	-	.	Parent=FBgn0036362.2.mrna1;Target=FBgn0036362.2 35 606 +
Chr1	stalkie_big_nohaplotig	exon	61861677	61861710	100	-	.	Parent=FBgn0036362.2.mrna1;Target=FBgn0036362.2 1 34 +
Chr1	stalkie_big_nohaplotig	CDS	61860174	61860389	.	-	0	Parent=FBgn0036362.2.mrna1;Target=FBgn0036362.2 607 822 +
Chr1	stalkie_big_nohaplotig	CDS	61861041	61861612	.	-	2	Parent=FBgn0036362.2.mrna1;Target=FBgn0036362.2 35 606 +
Chr1	stalkie_big_nohaplotig	CDS	61861677	61861710	.	-	0	Parent=FBgn0036362.2.mrna1;Target=FBgn0036362.2 1 34 +
Chr1	gffcl	locus	61863901	61865035	.	-	.	ID=RLOC_00008444;geneIDs=FBgn0036362.1.path1;transcripts=FBgn0036362.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61863901	61865035	.	-	.	ID=FBgn0036362.1.mrna1;geneID=FBgn0036362.1.path1;Name=FBgn0036362.1;Dir=sensecoverage=100.0;identity=99.8;matches=892;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008444
Chr1	stalkie_big_nohaplotig	exon	61863901	61864128	100	-	.	Parent=FBgn0036362.1.mrna1;Target=FBgn0036362.1 667 894 +
Chr1	stalkie_big_nohaplotig	exon	61864198	61864306	100	-	.	Parent=FBgn0036362.1.mrna1;Target=FBgn0036362.1 558 666 +
Chr1	stalkie_big_nohaplotig	exon	61864387	61864855	99	-	.	Parent=FBgn0036362.1.mrna1;Target=FBgn0036362.1 89 557 +
Chr1	stalkie_big_nohaplotig	exon	61864948	61865035	100	-	.	Parent=FBgn0036362.1.mrna1;Target=FBgn0036362.1 1 88 +
Chr1	stalkie_big_nohaplotig	CDS	61863901	61864128	.	-	0	Parent=FBgn0036362.1.mrna1;Target=FBgn0036362.1 667 894 +
Chr1	stalkie_big_nohaplotig	CDS	61864198	61864306	.	-	1	Parent=FBgn0036362.1.mrna1;Target=FBgn0036362.1 558 666 +
Chr1	stalkie_big_nohaplotig	CDS	61864387	61864855	.	-	2	Parent=FBgn0036362.1.mrna1;Target=FBgn0036362.1 89 557 +
Chr1	stalkie_big_nohaplotig	CDS	61864948	61865035	.	-	0	Parent=FBgn0036362.1.mrna1;Target=FBgn0036362.1 1 88 +
Chr1	gffcl	locus	61870219	61881050	.	+	.	ID=RLOC_00008445;geneIDs=comp150171_c0_seq1.path1;transcripts=comp150171_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61870219	61881050	.	+	.	ID=comp150171_c0_seq1.mrna1;geneID=comp150171_c0_seq1.path1;Name=comp150171_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=897;mismatches=2;indels=0;unknowns=0;Target=comp150171_c0_seq1 531 899 +;locus=RLOC_00008445
Chr1	stalkie_big_nohaplotig	exon	61870219	61870415	98	+	.	Parent=comp150171_c0_seq1.mrna1;Target=comp150171_c0_seq1 1 197 +
Chr1	stalkie_big_nohaplotig	exon	61880163	61880404	100	+	.	Parent=comp150171_c0_seq1.mrna1;Target=comp150171_c0_seq1 198 439 +
Chr1	stalkie_big_nohaplotig	exon	61880535	61880604	100	+	.	Parent=comp150171_c0_seq1.mrna1;Target=comp150171_c0_seq1 440 509 +
Chr1	stalkie_big_nohaplotig	exon	61880661	61881050	100	+	.	Parent=comp150171_c0_seq1.mrna1;Target=comp150171_c0_seq1 510 899 +
Chr1	stalkie_big_nohaplotig	CDS	61880682	61881050	.	+	0	Parent=comp150171_c0_seq1.mrna1
Chr1	gffcl	locus	61890061	61890648	.	+	.	ID=RLOC_00008447;geneIDs=Dv_FBgn0200813.1.path1;transcripts=Dv_FBgn0200813.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61890061	61890648	.	+	.	ID=Dv_FBgn0200813.1.mrna1;geneID=Dv_FBgn0200813.1.path1;Name=Dv_FBgn0200813.1;Dir=sensecoverage=100.0;identity=100.0;matches=525;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008447
Chr1	stalkie_big_nohaplotig	exon	61890061	61890376	100	+	.	Parent=Dv_FBgn0200813.1.mrna1;Target=Dv_FBgn0200813.1 1 316 +
Chr1	stalkie_big_nohaplotig	exon	61890440	61890648	100	+	.	Parent=Dv_FBgn0200813.1.mrna1;Target=Dv_FBgn0200813.1 317 525 +
Chr1	stalkie_big_nohaplotig	CDS	61890061	61890376	.	+	0	Parent=Dv_FBgn0200813.1.mrna1;Target=Dv_FBgn0200813.1 1 316 +
Chr1	stalkie_big_nohaplotig	CDS	61890440	61890648	.	+	2	Parent=Dv_FBgn0200813.1.mrna1;Target=Dv_FBgn0200813.1 317 525 +
Chr1	gffcl	locus	61907488	61909032	.	+	.	ID=RLOC_00008448;geneIDs=FBgn0036354.2.path1;transcripts=FBgn0036354.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61907488	61909032	.	+	.	ID=FBgn0036354.2.mrna1;geneID=FBgn0036354.2.path1;Name=FBgn0036354.2;Dir=sensecoverage=100.0;identity=99.0;matches=1048;mismatches=11;indels=0;unknowns=0;locus=RLOC_00008448
Chr1	stalkie_big_nohaplotig	exon	61907488	61907853	98	+	.	Parent=FBgn0036354.2.mrna1;Target=FBgn0036354.2 1 366 +
Chr1	stalkie_big_nohaplotig	exon	61907912	61908442	99	+	.	Parent=FBgn0036354.2.mrna1;Target=FBgn0036354.2 367 897 +
Chr1	stalkie_big_nohaplotig	exon	61908871	61909032	98	+	.	Parent=FBgn0036354.2.mrna1;Target=FBgn0036354.2 898 1059 +
Chr1	stalkie_big_nohaplotig	CDS	61907488	61907853	.	+	0	Parent=FBgn0036354.2.mrna1;Target=FBgn0036354.2 1 366 +
Chr1	stalkie_big_nohaplotig	CDS	61907912	61908442	.	+	0	Parent=FBgn0036354.2.mrna1;Target=FBgn0036354.2 367 897 +
Chr1	stalkie_big_nohaplotig	CDS	61908871	61909032	.	+	0	Parent=FBgn0036354.2.mrna1;Target=FBgn0036354.2 898 1059 +
Chr1	gffcl	locus	61915953	61916288	.	+	.	ID=RLOC_00008449;geneIDs=comp68215_c0_seq1.path1;transcripts=comp68215_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61915953	61916288	.	+	.	ID=comp68215_c0_seq1.mrna1;geneID=comp68215_c0_seq1.path1;Name=comp68215_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.7;matches=335;mismatches=1;indels=0;unknowns=0;Target=comp68215_c0_seq1 340 5 .;CDS_Target=comp68215_c0_seq1 62 6 .;locus=RLOC_00008449
Chr1	stalkie_big_nohaplotig	exon	61915953	61916288	99	+	.	Parent=comp68215_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	61915954	61916010	.	+	0	Parent=comp68215_c0_seq1.mrna1
Chr1	gffcl	locus	61918018	61918398	.	-	.	ID=RLOC_00008450;geneIDs=comp150280_c0_seq1.path1;transcripts=comp150280_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61918018	61918398	.	-	.	ID=comp150280_c0_seq1.mrna1;geneID=comp150280_c0_seq1.path1;Name=comp150280_c0_seq1;Dir=indeterminatecoverage=72.8;identity=97.1;matches=371;mismatches=10;indels=1;unknowns=0;Target=comp150280_c0_seq1 525 144 .;CDS_Target=comp150280_c0_seq1 446 144 .;locus=RLOC_00008450
Chr1	stalkie_big_nohaplotig	exon	61918018	61918398	97	-	.	Parent=comp150280_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	61918097	61918398	.	-	0	Parent=comp150280_c0_seq1.mrna1
Chr1	gffcl	locus	61926793	61928725	.	+	.	ID=RLOC_00008451;geneIDs=FBgn0052121.1.path1;transcripts=FBgn0052121.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61926793	61928725	.	+	.	ID=FBgn0052121.1.mrna1;geneID=FBgn0052121.1.path1;Name=FBgn0052121.1;Dir=sensecoverage=100.0;identity=99.6;matches=1644;mismatches=5;indels=1;unknowns=0;Target=FBgn0052121.1 3 44 +;locus=RLOC_00008451
Chr1	stalkie_big_nohaplotig	exon	61926793	61927007	99	+	.	Parent=FBgn0052121.1.mrna1;Target=FBgn0052121.1 1 216 +
Chr1	stalkie_big_nohaplotig	exon	61927087	61928138	99	+	.	Parent=FBgn0052121.1.mrna1;Target=FBgn0052121.1 217 1268 +
Chr1	stalkie_big_nohaplotig	exon	61928344	61928725	99	+	.	Parent=FBgn0052121.1.mrna1;Target=FBgn0052121.1 1269 1650 +
Chr1	stalkie_big_nohaplotig	CDS	61926795	61926835	.	+	0	Parent=FBgn0052121.1.mrna1
Chr1	gffcl	locus	61936204	61947222	.	.	.	ID=RLOC_00008452;geneIDs=FBgn0260049.1.path1,comp147061_c0_seq1.path1;transcripts=FBgn0260049.1.mrna1,comp147061_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61936204	61947222	.	-	.	ID=FBgn0260049.1.mrna1;geneID=FBgn0260049.1.path1;Name=FBgn0260049.1;Dir=sensecoverage=100.0;identity=99.7;matches=1834;mismatches=5;indels=0;unknowns=0;locus=RLOC_00008452
Chr1	stalkie_big_nohaplotig	exon	61936204	61936310	100	-	.	Parent=FBgn0260049.1.mrna1;Target=FBgn0260049.1 1733 1839 +
Chr1	stalkie_big_nohaplotig	exon	61936377	61936527	100	-	.	Parent=FBgn0260049.1.mrna1;Target=FBgn0260049.1 1582 1732 +
Chr1	stalkie_big_nohaplotig	exon	61936696	61937151	99	-	.	Parent=FBgn0260049.1.mrna1;Target=FBgn0260049.1 1126 1581 +
Chr1	stalkie_big_nohaplotig	exon	61937218	61937816	99	-	.	Parent=FBgn0260049.1.mrna1;Target=FBgn0260049.1 527 1125 +
Chr1	stalkie_big_nohaplotig	exon	61937882	61938145	100	-	.	Parent=FBgn0260049.1.mrna1;Target=FBgn0260049.1 263 526 +
Chr1	stalkie_big_nohaplotig	exon	61944972	61945062	100	-	.	Parent=FBgn0260049.1.mrna1;Target=FBgn0260049.1 172 262 +
Chr1	stalkie_big_nohaplotig	exon	61946757	61946878	100	-	.	Parent=FBgn0260049.1.mrna1;Target=FBgn0260049.1 50 171 +
Chr1	stalkie_big_nohaplotig	exon	61947174	61947222	100	-	.	Parent=FBgn0260049.1.mrna1;Target=FBgn0260049.1 1 49 +
Chr1	stalkie_big_nohaplotig	CDS	61936204	61936310	.	-	2	Parent=FBgn0260049.1.mrna1;Target=FBgn0260049.1 1733 1839 +
Chr1	stalkie_big_nohaplotig	CDS	61936377	61936527	.	-	0	Parent=FBgn0260049.1.mrna1;Target=FBgn0260049.1 1582 1732 +
Chr1	stalkie_big_nohaplotig	CDS	61936696	61937151	.	-	0	Parent=FBgn0260049.1.mrna1;Target=FBgn0260049.1 1126 1581 +
Chr1	stalkie_big_nohaplotig	CDS	61937218	61937816	.	-	2	Parent=FBgn0260049.1.mrna1;Target=FBgn0260049.1 527 1125 +
Chr1	stalkie_big_nohaplotig	CDS	61937882	61938145	.	-	2	Parent=FBgn0260049.1.mrna1;Target=FBgn0260049.1 263 526 +
Chr1	stalkie_big_nohaplotig	CDS	61944972	61945062	.	-	0	Parent=FBgn0260049.1.mrna1;Target=FBgn0260049.1 172 262 +
Chr1	stalkie_big_nohaplotig	CDS	61946757	61946878	.	-	2	Parent=FBgn0260049.1.mrna1;Target=FBgn0260049.1 50 171 +
Chr1	stalkie_big_nohaplotig	CDS	61947174	61947222	.	-	0	Parent=FBgn0260049.1.mrna1;Target=FBgn0260049.1 1 49 +
Chr1	stalkie_big_nohaplotig	mRNA	61946856	61946955	.	+	.	ID=comp147061_c0_seq1.mrna1;geneID=comp147061_c0_seq1.path1;Name=comp147061_c0_seq1;Dir=indeterminatecoverage=9.0;identity=100.0;matches=100;mismatches=0;indels=0;unknowns=0;Target=comp147061_c0_seq1 100 1 .;locus=RLOC_00008452
Chr1	stalkie_big_nohaplotig	exon	61946856	61946955	100	+	.	Parent=comp147061_c0_seq1.mrna1
Chr1	gffcl	locus	61999487	62024091	.	+	.	ID=RLOC_00008454;geneIDs=FBgn0029167.1.path1;transcripts=FBgn0029167.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	61999487	62024091	.	+	.	ID=FBgn0029167.1.mrna1;geneID=FBgn0029167.1.path1;Name=FBgn0029167.1;Dir=sensecoverage=100.0;identity=99.3;matches=11566;mismatches=77;indels=0;unknowns=0;locus=RLOC_00008454
Chr1	stalkie_big_nohaplotig	exon	61999487	61999623	100	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 1 137 +
Chr1	stalkie_big_nohaplotig	exon	62003747	62003854	99	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 138 245 +
Chr1	stalkie_big_nohaplotig	exon	62004051	62004089	100	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 246 284 +
Chr1	stalkie_big_nohaplotig	exon	62005125	62005157	100	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 285 317 +
Chr1	stalkie_big_nohaplotig	exon	62005475	62005507	96	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 318 350 +
Chr1	stalkie_big_nohaplotig	exon	62005560	62005634	100	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 351 425 +
Chr1	stalkie_big_nohaplotig	exon	62007151	62007407	99	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 426 682 +
Chr1	stalkie_big_nohaplotig	exon	62007474	62007633	98	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 683 842 +
Chr1	stalkie_big_nohaplotig	exon	62007700	62007827	99	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 843 970 +
Chr1	stalkie_big_nohaplotig	exon	62007895	62007990	100	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 971 1066 +
Chr1	stalkie_big_nohaplotig	exon	62008047	62008244	100	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 1067 1264 +
Chr1	stalkie_big_nohaplotig	exon	62008304	62008467	97	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 1265 1428 +
Chr1	stalkie_big_nohaplotig	exon	62008521	62008678	98	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 1429 1586 +
Chr1	stalkie_big_nohaplotig	exon	62008747	62008901	97	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 1587 1741 +
Chr1	stalkie_big_nohaplotig	exon	62008963	62009565	100	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 1742 2344 +
Chr1	stalkie_big_nohaplotig	exon	62009855	62010083	100	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 2345 2573 +
Chr1	stalkie_big_nohaplotig	exon	62010142	62011028	99	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 2574 3460 +
Chr1	stalkie_big_nohaplotig	exon	62011091	62011340	98	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 3461 3710 +
Chr1	stalkie_big_nohaplotig	exon	62011404	62011730	99	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 3711 4037 +
Chr1	stalkie_big_nohaplotig	exon	62011799	62012115	99	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 4038 4354 +
Chr1	stalkie_big_nohaplotig	exon	62012205	62012581	99	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 4355 4731 +
Chr1	stalkie_big_nohaplotig	exon	62012661	62012832	99	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 4732 4903 +
Chr1	stalkie_big_nohaplotig	exon	62014569	62015602	99	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 4904 5937 +
Chr1	stalkie_big_nohaplotig	exon	62015665	62015929	99	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 5938 6202 +
Chr1	stalkie_big_nohaplotig	exon	62015986	62016076	100	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 6203 6293 +
Chr1	stalkie_big_nohaplotig	exon	62016130	62016382	99	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 6294 6546 +
Chr1	stalkie_big_nohaplotig	exon	62016440	62016919	98	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 6547 7026 +
Chr1	stalkie_big_nohaplotig	exon	62016999	62017287	98	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 7027 7315 +
Chr1	stalkie_big_nohaplotig	exon	62017360	62017537	97	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 7316 7493 +
Chr1	stalkie_big_nohaplotig	exon	62017598	62017899	98	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 7494 7795 +
Chr1	stalkie_big_nohaplotig	exon	62017962	62018061	99	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 7796 7895 +
Chr1	stalkie_big_nohaplotig	exon	62019079	62019485	98	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 7896 8302 +
Chr1	stalkie_big_nohaplotig	exon	62019546	62020029	100	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 8303 8786 +
Chr1	stalkie_big_nohaplotig	exon	62020160	62020362	100	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 8787 8989 +
Chr1	stalkie_big_nohaplotig	exon	62020447	62020757	98	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 8990 9300 +
Chr1	stalkie_big_nohaplotig	exon	62021335	62021625	100	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 9301 9591 +
Chr1	stalkie_big_nohaplotig	exon	62021724	62022714	99	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 9592 10582 +
Chr1	stalkie_big_nohaplotig	exon	62022780	62022995	99	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 10583 10798 +
Chr1	stalkie_big_nohaplotig	exon	62023056	62023511	99	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 10799 11254 +
Chr1	stalkie_big_nohaplotig	exon	62023572	62023724	99	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 11255 11407 +
Chr1	stalkie_big_nohaplotig	exon	62023788	62023891	100	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 11408 11511 +
Chr1	stalkie_big_nohaplotig	exon	62023960	62024091	99	+	.	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 11512 11643 +
Chr1	stalkie_big_nohaplotig	CDS	61999487	61999623	.	+	0	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 1 137 +
Chr1	stalkie_big_nohaplotig	CDS	62003747	62003854	.	+	1	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 138 245 +
Chr1	stalkie_big_nohaplotig	CDS	62004051	62004089	.	+	1	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 246 284 +
Chr1	stalkie_big_nohaplotig	CDS	62005125	62005157	.	+	1	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 285 317 +
Chr1	stalkie_big_nohaplotig	CDS	62005475	62005507	.	+	1	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 318 350 +
Chr1	stalkie_big_nohaplotig	CDS	62005560	62005634	.	+	1	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 351 425 +
Chr1	stalkie_big_nohaplotig	CDS	62007151	62007407	.	+	1	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 426 682 +
Chr1	stalkie_big_nohaplotig	CDS	62007474	62007633	.	+	2	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 683 842 +
Chr1	stalkie_big_nohaplotig	CDS	62007700	62007827	.	+	1	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 843 970 +
Chr1	stalkie_big_nohaplotig	CDS	62007895	62007990	.	+	2	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 971 1066 +
Chr1	stalkie_big_nohaplotig	CDS	62008047	62008244	.	+	2	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 1067 1264 +
Chr1	stalkie_big_nohaplotig	CDS	62008304	62008467	.	+	2	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 1265 1428 +
Chr1	stalkie_big_nohaplotig	CDS	62008521	62008678	.	+	0	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 1429 1586 +
Chr1	stalkie_big_nohaplotig	CDS	62008747	62008901	.	+	1	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 1587 1741 +
Chr1	stalkie_big_nohaplotig	CDS	62008963	62009565	.	+	2	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 1742 2344 +
Chr1	stalkie_big_nohaplotig	CDS	62009855	62010083	.	+	2	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 2345 2573 +
Chr1	stalkie_big_nohaplotig	CDS	62010142	62011028	.	+	1	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 2574 3460 +
Chr1	stalkie_big_nohaplotig	CDS	62011091	62011340	.	+	2	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 3461 3710 +
Chr1	stalkie_big_nohaplotig	CDS	62011404	62011730	.	+	1	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 3711 4037 +
Chr1	stalkie_big_nohaplotig	CDS	62011799	62012115	.	+	1	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 4038 4354 +
Chr1	stalkie_big_nohaplotig	CDS	62012205	62012581	.	+	2	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 4355 4731 +
Chr1	stalkie_big_nohaplotig	CDS	62012661	62012832	.	+	0	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 4732 4903 +
Chr1	stalkie_big_nohaplotig	CDS	62014569	62015602	.	+	2	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 4904 5937 +
Chr1	stalkie_big_nohaplotig	CDS	62015665	62015929	.	+	0	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 5938 6202 +
Chr1	stalkie_big_nohaplotig	CDS	62015986	62016076	.	+	2	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 6203 6293 +
Chr1	stalkie_big_nohaplotig	CDS	62016130	62016382	.	+	1	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 6294 6546 +
Chr1	stalkie_big_nohaplotig	CDS	62016440	62016919	.	+	0	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 6547 7026 +
Chr1	stalkie_big_nohaplotig	CDS	62016999	62017287	.	+	0	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 7027 7315 +
Chr1	stalkie_big_nohaplotig	CDS	62017360	62017537	.	+	2	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 7316 7493 +
Chr1	stalkie_big_nohaplotig	CDS	62017598	62017899	.	+	1	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 7494 7795 +
Chr1	stalkie_big_nohaplotig	CDS	62017962	62018061	.	+	2	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 7796 7895 +
Chr1	stalkie_big_nohaplotig	CDS	62019079	62019485	.	+	1	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 7896 8302 +
Chr1	stalkie_big_nohaplotig	CDS	62019546	62020029	.	+	2	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 8303 8786 +
Chr1	stalkie_big_nohaplotig	CDS	62020160	62020362	.	+	1	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 8787 8989 +
Chr1	stalkie_big_nohaplotig	CDS	62020447	62020757	.	+	2	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 8990 9300 +
Chr1	stalkie_big_nohaplotig	CDS	62021335	62021625	.	+	0	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 9301 9591 +
Chr1	stalkie_big_nohaplotig	CDS	62021724	62022714	.	+	0	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 9592 10582 +
Chr1	stalkie_big_nohaplotig	CDS	62022780	62022995	.	+	2	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 10583 10798 +
Chr1	stalkie_big_nohaplotig	CDS	62023056	62023511	.	+	2	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 10799 11254 +
Chr1	stalkie_big_nohaplotig	CDS	62023572	62023724	.	+	2	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 11255 11407 +
Chr1	stalkie_big_nohaplotig	CDS	62023788	62023891	.	+	2	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 11408 11511 +
Chr1	stalkie_big_nohaplotig	CDS	62023960	62024091	.	+	0	Parent=FBgn0029167.1.mrna1;Target=FBgn0029167.1 11512 11643 +
Chr1	gffcl	locus	62238011	62242667	.	-	.	ID=RLOC_00008455;geneIDs=comp109192_c0_seq1.path1;transcripts=comp109192_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	62238011	62242667	.	-	.	ID=comp109192_c0_seq1.mrna1;geneID=comp109192_c0_seq1.path1;Name=comp109192_c0_seq1;Dir=antisensecoverage=99.8;identity=100.0;matches=629;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008455
Chr1	stalkie_big_nohaplotig	exon	62238011	62238455	100	-	.	Parent=comp109192_c0_seq1.mrna1;Target=comp109192_c0_seq1 1 445 -
Chr1	stalkie_big_nohaplotig	exon	62242484	62242667	100	-	.	Parent=comp109192_c0_seq1.mrna1;Target=comp109192_c0_seq1 446 629 -
Chr1	stalkie_big_nohaplotig	CDS	62238332	62238455	.	-	1	Parent=comp109192_c0_seq1.mrna1;Target=comp109192_c0_seq1 322 445 .
Chr1	stalkie_big_nohaplotig	CDS	62242484	62242536	.	-	0	Parent=comp109192_c0_seq1.mrna1;Target=comp109192_c0_seq1 446 498 .
Chr1	gffcl	locus	62417817	62418441	.	-	.	ID=RLOC_00008456;geneIDs=comp92764_c0_seq1.path1;transcripts=comp92764_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	62417817	62418441	.	-	.	ID=comp92764_c0_seq1.mrna1;geneID=comp92764_c0_seq1.path1;Name=comp92764_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=625;mismatches=0;indels=0;unknowns=0;Target=comp92764_c0_seq1 625 1 .;CDS_Target=comp92764_c0_seq1 272 3 .;locus=RLOC_00008456
Chr1	stalkie_big_nohaplotig	exon	62417817	62418441	100	-	.	Parent=comp92764_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	62418170	62418439	.	-	0	Parent=comp92764_c0_seq1.mrna1
Chr1	gffcl	locus	62654942	62662349	.	+	.	ID=RLOC_00008458;geneIDs=FBgn0264001.1.path1;transcripts=FBgn0264001.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	62654942	62662349	.	+	.	ID=FBgn0264001.1.mrna1;geneID=FBgn0264001.1.path1;Name=FBgn0264001.1;Dir=sensecoverage=100.0;identity=100.0;matches=987;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008458
Chr1	stalkie_big_nohaplotig	exon	62654942	62655043	100	+	.	Parent=FBgn0264001.1.mrna1;Target=FBgn0264001.1 1 102 +
Chr1	stalkie_big_nohaplotig	exon	62655162	62655305	100	+	.	Parent=FBgn0264001.1.mrna1;Target=FBgn0264001.1 103 246 +
Chr1	stalkie_big_nohaplotig	exon	62655730	62655991	100	+	.	Parent=FBgn0264001.1.mrna1;Target=FBgn0264001.1 247 508 +
Chr1	stalkie_big_nohaplotig	exon	62656205	62656303	100	+	.	Parent=FBgn0264001.1.mrna1;Target=FBgn0264001.1 509 607 +
Chr1	stalkie_big_nohaplotig	exon	62658476	62658553	100	+	.	Parent=FBgn0264001.1.mrna1;Target=FBgn0264001.1 608 685 +
Chr1	stalkie_big_nohaplotig	exon	62661966	62662142	100	+	.	Parent=FBgn0264001.1.mrna1;Target=FBgn0264001.1 686 862 +
Chr1	stalkie_big_nohaplotig	exon	62662225	62662349	100	+	.	Parent=FBgn0264001.1.mrna1;Target=FBgn0264001.1 863 987 +
Chr1	stalkie_big_nohaplotig	CDS	62654942	62655043	.	+	0	Parent=FBgn0264001.1.mrna1;Target=FBgn0264001.1 1 102 +
Chr1	stalkie_big_nohaplotig	CDS	62655162	62655305	.	+	0	Parent=FBgn0264001.1.mrna1;Target=FBgn0264001.1 103 246 +
Chr1	stalkie_big_nohaplotig	CDS	62655730	62655991	.	+	0	Parent=FBgn0264001.1.mrna1;Target=FBgn0264001.1 247 508 +
Chr1	stalkie_big_nohaplotig	CDS	62656205	62656303	.	+	2	Parent=FBgn0264001.1.mrna1;Target=FBgn0264001.1 509 607 +
Chr1	stalkie_big_nohaplotig	CDS	62658476	62658553	.	+	2	Parent=FBgn0264001.1.mrna1;Target=FBgn0264001.1 608 685 +
Chr1	stalkie_big_nohaplotig	CDS	62661966	62662142	.	+	2	Parent=FBgn0264001.1.mrna1;Target=FBgn0264001.1 686 862 +
Chr1	stalkie_big_nohaplotig	CDS	62662225	62662349	.	+	2	Parent=FBgn0264001.1.mrna1;Target=FBgn0264001.1 863 987 +
Chr1	gffcl	locus	62674143	62675380	.	-	.	ID=RLOC_00008459;geneIDs=comp153431_c0_seq1.path1;transcripts=comp153431_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	62674143	62675380	.	-	.	ID=comp153431_c0_seq1.mrna1;geneID=comp153431_c0_seq1.path1;Name=comp153431_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.9;matches=1034;mismatches=41;indels=50;unknowns=0;Target=comp153431_c0_seq1 539 498 .;locus=RLOC_00008459
Chr1	stalkie_big_nohaplotig	exon	62674143	62674673	93	-	.	Parent=comp153431_c0_seq1.mrna1;Target=comp153431_c0_seq1 1120 583 .
Chr1	stalkie_big_nohaplotig	exon	62674832	62675380	90	-	.	Parent=comp153431_c0_seq1.mrna1;Target=comp153431_c0_seq1 582 1 .
Chr1	stalkie_big_nohaplotig	CDS	62674849	62674884	.	-	0	Parent=comp153431_c0_seq1.mrna1
Chr1	gffcl	locus	62675973	62676648	.	+	.	ID=RLOC_00008460;geneIDs=comp141041_c0_seq1.path2;transcripts=comp141041_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	62675973	62676648	.	+	.	ID=comp141041_c0_seq1.mrna2;geneID=comp141041_c0_seq1.path2;Name=comp141041_c0_seq1;Dir=indeterminatecoverage=89.9;identity=99.9;matches=675;mismatches=1;indels=0;unknowns=0;Target=comp141041_c0_seq1 752 77 .;CDS_Target=comp141041_c0_seq1 106 77 .;locus=RLOC_00008460
Chr1	stalkie_big_nohaplotig	exon	62675973	62676648	99	+	.	Parent=comp141041_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	62675973	62676002	.	+	0	Parent=comp141041_c0_seq1.mrna2
Chr1	gffcl	locus	62677583	62677889	.	+	.	ID=RLOC_00008461;geneIDs=comp145816_c0_seq1.path1;transcripts=comp145816_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	62677583	62677889	.	+	.	ID=comp145816_c0_seq1.mrna1;geneID=comp145816_c0_seq1.path1;Name=comp145816_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=306;mismatches=1;indels=0;unknowns=0;Target=comp145816_c0_seq1 307 1 .;CDS_Target=comp145816_c0_seq1 252 154 .;locus=RLOC_00008461
Chr1	stalkie_big_nohaplotig	exon	62677583	62677889	99	+	.	Parent=comp145816_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	62677736	62677834	.	+	0	Parent=comp145816_c0_seq1.mrna1
Chr1	gffcl	locus	62816003	62816513	.	-	.	ID=RLOC_00008462;geneIDs=comp201181_c0_seq1.path2;transcripts=comp201181_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	62816003	62816513	.	-	.	ID=comp201181_c0_seq1.mrna2;geneID=comp201181_c0_seq1.path2;Name=comp201181_c0_seq1;Dir=indeterminatecoverage=64.3;identity=99.8;matches=510;mismatches=1;indels=0;unknowns=0;Target=comp201181_c0_seq1 766 256 .;CDS_Target=comp201181_c0_seq1 599 534 .;locus=RLOC_00008462
Chr1	stalkie_big_nohaplotig	exon	62816003	62816513	99	-	.	Parent=comp201181_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	62816170	62816235	.	-	0	Parent=comp201181_c0_seq1.mrna2
Chr1	gffcl	locus	62822410	62823390	.	-	.	ID=RLOC_00008463;geneIDs=FBgn0037011.1.path1;transcripts=FBgn0037011.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	62822410	62823390	.	-	.	ID=FBgn0037011.1.mrna1;geneID=FBgn0037011.1.path1;Name=FBgn0037011.1;Dir=sensecoverage=100.0;identity=99.4;matches=817;mismatches=5;indels=0;unknowns=0;locus=RLOC_00008463
Chr1	stalkie_big_nohaplotig	exon	62822410	62822632	100	-	.	Parent=FBgn0037011.1.mrna1;Target=FBgn0037011.1 600 822 +
Chr1	stalkie_big_nohaplotig	exon	62822702	62823144	99	-	.	Parent=FBgn0037011.1.mrna1;Target=FBgn0037011.1 157 599 +
Chr1	stalkie_big_nohaplotig	exon	62823235	62823390	99	-	.	Parent=FBgn0037011.1.mrna1;Target=FBgn0037011.1 1 156 +
Chr1	stalkie_big_nohaplotig	CDS	62822410	62822632	.	-	1	Parent=FBgn0037011.1.mrna1;Target=FBgn0037011.1 600 822 +
Chr1	stalkie_big_nohaplotig	CDS	62822702	62823144	.	-	0	Parent=FBgn0037011.1.mrna1;Target=FBgn0037011.1 157 599 +
Chr1	stalkie_big_nohaplotig	CDS	62823235	62823390	.	-	0	Parent=FBgn0037011.1.mrna1;Target=FBgn0037011.1 1 156 +
Chr1	gffcl	locus	62823690	62824059	.	+	.	ID=RLOC_00008464;geneIDs=FBgn0028746.1.path1;transcripts=FBgn0028746.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	62823690	62824059	.	+	.	ID=FBgn0028746.1.mrna1;geneID=FBgn0028746.1.path1;Name=FBgn0028746.1;Dir=sensecoverage=100.0;identity=99.0;matches=306;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008464
Chr1	stalkie_big_nohaplotig	exon	62823690	62823947	99	+	.	Parent=FBgn0028746.1.mrna1;Target=FBgn0028746.1 1 258 +
Chr1	stalkie_big_nohaplotig	exon	62824009	62824059	98	+	.	Parent=FBgn0028746.1.mrna1;Target=FBgn0028746.1 259 309 +
Chr1	stalkie_big_nohaplotig	CDS	62823690	62823947	.	+	0	Parent=FBgn0028746.1.mrna1;Target=FBgn0028746.1 1 258 +
Chr1	stalkie_big_nohaplotig	CDS	62824009	62824059	.	+	0	Parent=FBgn0028746.1.mrna1;Target=FBgn0028746.1 259 309 +
Chr1	gffcl	locus	62836750	62843653	.	-	.	ID=RLOC_00008465;geneIDs=FBgn0014002.2.path1;transcripts=FBgn0014002.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	62836750	62843653	.	-	.	ID=FBgn0014002.2.mrna1;geneID=FBgn0014002.2.path1;Name=FBgn0014002.2;Dir=sensecoverage=100.0;identity=99.9;matches=1705;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008465
Chr1	stalkie_big_nohaplotig	exon	62836750	62836815	100	-	.	Parent=FBgn0014002.2.mrna1;Target=FBgn0014002.2 1642 1707 +
Chr1	stalkie_big_nohaplotig	exon	62836880	62837851	99	-	.	Parent=FBgn0014002.2.mrna1;Target=FBgn0014002.2 670 1641 +
Chr1	stalkie_big_nohaplotig	exon	62837914	62838221	100	-	.	Parent=FBgn0014002.2.mrna1;Target=FBgn0014002.2 362 669 +
Chr1	stalkie_big_nohaplotig	exon	62843293	62843653	100	-	.	Parent=FBgn0014002.2.mrna1;Target=FBgn0014002.2 1 361 +
Chr1	stalkie_big_nohaplotig	CDS	62836750	62836815	.	-	0	Parent=FBgn0014002.2.mrna1;Target=FBgn0014002.2 1642 1707 +
Chr1	stalkie_big_nohaplotig	CDS	62836880	62837851	.	-	0	Parent=FBgn0014002.2.mrna1;Target=FBgn0014002.2 670 1641 +
Chr1	stalkie_big_nohaplotig	CDS	62837914	62838221	.	-	2	Parent=FBgn0014002.2.mrna1;Target=FBgn0014002.2 362 669 +
Chr1	stalkie_big_nohaplotig	CDS	62843293	62843653	.	-	0	Parent=FBgn0014002.2.mrna1;Target=FBgn0014002.2 1 361 +
Chr1	gffcl	locus	62846355	62846594	.	-	.	ID=RLOC_00008466;geneIDs=comp149811_c0_seq1.path1;transcripts=comp149811_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	62846355	62846594	.	-	.	ID=comp149811_c0_seq1.mrna1;geneID=comp149811_c0_seq1.path1;Name=comp149811_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=236;mismatches=4;indels=0;unknowns=0;Target=comp149811_c0_seq1 240 1 .;CDS_Target=comp149811_c0_seq1 123 1 .;locus=RLOC_00008466
Chr1	stalkie_big_nohaplotig	exon	62846355	62846594	98	-	.	Parent=comp149811_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	62846472	62846594	.	-	0	Parent=comp149811_c0_seq1.mrna1
Chr1	gffcl	locus	62870759	62873857	.	+	.	ID=RLOC_00008468;geneIDs=FBgn0040817.1.path1;transcripts=FBgn0040817.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	62870759	62873857	.	+	.	ID=FBgn0040817.1.mrna1;geneID=FBgn0040817.1.path1;Name=FBgn0040817.1;Dir=sensecoverage=100.0;identity=100.0;matches=378;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008468
Chr1	stalkie_big_nohaplotig	exon	62870759	62870882	100	+	.	Parent=FBgn0040817.1.mrna1;Target=FBgn0040817.1 1 124 +
Chr1	stalkie_big_nohaplotig	exon	62873604	62873857	100	+	.	Parent=FBgn0040817.1.mrna1;Target=FBgn0040817.1 125 378 +
Chr1	stalkie_big_nohaplotig	CDS	62870759	62870882	.	+	0	Parent=FBgn0040817.1.mrna1;Target=FBgn0040817.1 1 124 +
Chr1	stalkie_big_nohaplotig	CDS	62873604	62873857	.	+	2	Parent=FBgn0040817.1.mrna1;Target=FBgn0040817.1 125 378 +
Chr1	gffcl	locus	62888616	62889221	.	-	.	ID=RLOC_00008470;geneIDs=comp149795_c0_seq1.path1;transcripts=comp149795_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	62888616	62889221	.	-	.	ID=comp149795_c0_seq1.mrna1;geneID=comp149795_c0_seq1.path1;Name=comp149795_c0_seq1;Dir=indeterminatecoverage=98.1;identity=98.3;matches=596;mismatches=9;indels=1;unknowns=0;Target=comp149795_c0_seq1 617 13 .;CDS_Target=comp149795_c0_seq1 617 543 .;locus=RLOC_00008470
Chr1	stalkie_big_nohaplotig	exon	62888616	62889221	98	-	.	Parent=comp149795_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	62888616	62888690	.	-	0	Parent=comp149795_c0_seq1.mrna1
Chr1	gffcl	locus	62895062	62896330	.	+	.	ID=RLOC_00008471;geneIDs=comp160044_c0_seq1.path1;transcripts=comp160044_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	62895062	62896330	.	+	.	ID=comp160044_c0_seq1.mrna1;geneID=comp160044_c0_seq1.path1;Name=comp160044_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1256;mismatches=7;indels=6;unknowns=0;Target=comp160044_c0_seq1 1263 1 .;CDS_Target=comp160044_c0_seq1 479 375 .;locus=RLOC_00008471
Chr1	stalkie_big_nohaplotig	exon	62895062	62896330	98	+	.	Parent=comp160044_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	62895440	62895544	.	+	0	Parent=comp160044_c0_seq1.mrna1
Chr1	gffcl	locus	62900015	64842737	.	+	.	ID=RLOC_00008472;geneIDs=comp49753_c0_seq1.path1;transcripts=comp49753_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	62900015	64842737	.	+	.	ID=comp49753_c0_seq1.mrna1;geneID=comp49753_c0_seq1.path1;Name=comp49753_c0_seq1;Dir=indeterminatecoverage=92.9;identity=100.0;matches=522;mismatches=0;indels=0;unknowns=0;Target=comp49753_c0_seq1 110 30 .;locus=RLOC_00008472
Chr1	stalkie_big_nohaplotig	exon	62900015	62900505	100	+	.	Parent=comp49753_c0_seq1.mrna1;Target=comp49753_c0_seq1 491 1 .
Chr1	stalkie_big_nohaplotig	exon	64800242	64800245	100	+	.	Parent=comp49753_c0_seq1.mrna1;Target=comp49753_c0_seq1 495 492 .
Chr1	stalkie_big_nohaplotig	exon	64803027	64803030	100	+	.	Parent=comp49753_c0_seq1.mrna1;Target=comp49753_c0_seq1 499 496 .
Chr1	stalkie_big_nohaplotig	exon	64809622	64809627	100	+	.	Parent=comp49753_c0_seq1.mrna1;Target=comp49753_c0_seq1 505 500 .
Chr1	stalkie_big_nohaplotig	exon	64813113	64813116	100	+	.	Parent=comp49753_c0_seq1.mrna1;Target=comp49753_c0_seq1 509 506 .
Chr1	stalkie_big_nohaplotig	exon	64820332	64820338	100	+	.	Parent=comp49753_c0_seq1.mrna1;Target=comp49753_c0_seq1 516 510 .
Chr1	stalkie_big_nohaplotig	exon	64836070	64836073	100	+	.	Parent=comp49753_c0_seq1.mrna1;Target=comp49753_c0_seq1 520 517 .
Chr1	stalkie_big_nohaplotig	exon	64842736	64842737	100	+	.	Parent=comp49753_c0_seq1.mrna1;Target=comp49753_c0_seq1 522 521 .
Chr1	stalkie_big_nohaplotig	CDS	62900044	62900124	.	+	0	Parent=comp49753_c0_seq1.mrna1
Chr1	gffcl	locus	62901003	62901590	.	-	.	ID=RLOC_00008473;geneIDs=comp139335_c0_seq1.path1;transcripts=comp139335_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	62901003	62901590	.	-	.	ID=comp139335_c0_seq1.mrna1;geneID=comp139335_c0_seq1.path1;Name=comp139335_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=584;mismatches=4;indels=0;unknowns=0;Target=comp139335_c0_seq1 588 1 .;CDS_Target=comp139335_c0_seq1 384 229 .;locus=RLOC_00008473
Chr1	stalkie_big_nohaplotig	exon	62901003	62901590	99	-	.	Parent=comp139335_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	62901207	62901362	.	-	0	Parent=comp139335_c0_seq1.mrna1
Chr1	gffcl	locus	62903019	62954867	.	-	.	ID=RLOC_00008474;geneIDs=FBgn0036202.1.path1;transcripts=FBgn0036202.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	62903019	62954867	.	-	.	ID=FBgn0036202.1.mrna1;geneID=FBgn0036202.1.path1;Name=FBgn0036202.1;Dir=sensecoverage=100.0;identity=100.0;matches=1302;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008474
Chr1	stalkie_big_nohaplotig	exon	62903019	62903227	100	-	.	Parent=FBgn0036202.1.mrna1;Target=FBgn0036202.1 1094 1302 +
Chr1	stalkie_big_nohaplotig	exon	62903286	62903444	100	-	.	Parent=FBgn0036202.1.mrna1;Target=FBgn0036202.1 935 1093 +
Chr1	stalkie_big_nohaplotig	exon	62903784	62903906	100	-	.	Parent=FBgn0036202.1.mrna1;Target=FBgn0036202.1 812 934 +
Chr1	stalkie_big_nohaplotig	exon	62903974	62904118	100	-	.	Parent=FBgn0036202.1.mrna1;Target=FBgn0036202.1 667 811 +
Chr1	stalkie_big_nohaplotig	exon	62916529	62916752	100	-	.	Parent=FBgn0036202.1.mrna1;Target=FBgn0036202.1 443 666 +
Chr1	stalkie_big_nohaplotig	exon	62954426	62954867	100	-	.	Parent=FBgn0036202.1.mrna1;Target=FBgn0036202.1 1 442 +
Chr1	stalkie_big_nohaplotig	CDS	62903019	62903227	.	-	2	Parent=FBgn0036202.1.mrna1;Target=FBgn0036202.1 1094 1302 +
Chr1	stalkie_big_nohaplotig	CDS	62903286	62903444	.	-	2	Parent=FBgn0036202.1.mrna1;Target=FBgn0036202.1 935 1093 +
Chr1	stalkie_big_nohaplotig	CDS	62903784	62903906	.	-	2	Parent=FBgn0036202.1.mrna1;Target=FBgn0036202.1 812 934 +
Chr1	stalkie_big_nohaplotig	CDS	62903974	62904118	.	-	0	Parent=FBgn0036202.1.mrna1;Target=FBgn0036202.1 667 811 +
Chr1	stalkie_big_nohaplotig	CDS	62916529	62916752	.	-	2	Parent=FBgn0036202.1.mrna1;Target=FBgn0036202.1 443 666 +
Chr1	stalkie_big_nohaplotig	CDS	62954426	62954867	.	-	0	Parent=FBgn0036202.1.mrna1;Target=FBgn0036202.1 1 442 +
Chr1	gffcl	locus	62991493	62992001	.	+	.	ID=RLOC_00008475;geneIDs=comp146879_c0_seq1.path1;transcripts=comp146879_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	62991493	62992001	.	+	.	ID=comp146879_c0_seq1.mrna1;geneID=comp146879_c0_seq1.path1;Name=comp146879_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=509;mismatches=0;indels=4;unknowns=0;Target=comp146879_c0_seq1 513 1 .;CDS_Target=comp146879_c0_seq1 153 1 .;locus=RLOC_00008475
Chr1	stalkie_big_nohaplotig	exon	62991493	62992001	99	+	.	Parent=comp146879_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	62991493	62991641	.	+	0	Parent=comp146879_c0_seq1.mrna1
Chr1	gffcl	locus	63009896	63010472	.	+	.	ID=RLOC_00008478;geneIDs=comp152633_c0_seq1.path1;transcripts=comp152633_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63009896	63010472	.	+	.	ID=comp152633_c0_seq1.mrna1;geneID=comp152633_c0_seq1.path1;Name=comp152633_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=568;mismatches=9;indels=6;unknowns=0;Target=comp152633_c0_seq1 583 1 .;CDS_Target=comp152633_c0_seq1 371 216 .;locus=RLOC_00008478
Chr1	stalkie_big_nohaplotig	exon	63009896	63010472	97	+	.	Parent=comp152633_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	63010105	63010260	.	+	0	Parent=comp152633_c0_seq1.mrna1
Chr1	gffcl	locus	63020602	63025650	.	+	.	ID=RLOC_00008479;geneIDs=FBgn0262714.1.path1;transcripts=FBgn0262714.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63020602	63025650	.	+	.	ID=FBgn0262714.1.mrna1;geneID=FBgn0262714.1.path1;Name=FBgn0262714.1;Dir=sensecoverage=100.0;identity=100.0;matches=4064;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008479
Chr1	stalkie_big_nohaplotig	exon	63020602	63020719	100	+	.	Parent=FBgn0262714.1.mrna1;Target=FBgn0262714.1 1 118 +
Chr1	stalkie_big_nohaplotig	exon	63021274	63022278	100	+	.	Parent=FBgn0262714.1.mrna1;Target=FBgn0262714.1 119 1123 +
Chr1	stalkie_big_nohaplotig	exon	63022339	63022911	100	+	.	Parent=FBgn0262714.1.mrna1;Target=FBgn0262714.1 1124 1696 +
Chr1	stalkie_big_nohaplotig	exon	63022977	63024481	99	+	.	Parent=FBgn0262714.1.mrna1;Target=FBgn0262714.1 1697 3201 +
Chr1	stalkie_big_nohaplotig	exon	63024537	63024697	100	+	.	Parent=FBgn0262714.1.mrna1;Target=FBgn0262714.1 3202 3362 +
Chr1	stalkie_big_nohaplotig	exon	63024775	63025054	100	+	.	Parent=FBgn0262714.1.mrna1;Target=FBgn0262714.1 3363 3642 +
Chr1	stalkie_big_nohaplotig	exon	63025109	63025279	100	+	.	Parent=FBgn0262714.1.mrna1;Target=FBgn0262714.1 3643 3813 +
Chr1	stalkie_big_nohaplotig	exon	63025335	63025439	100	+	.	Parent=FBgn0262714.1.mrna1;Target=FBgn0262714.1 3814 3918 +
Chr1	stalkie_big_nohaplotig	exon	63025504	63025650	100	+	.	Parent=FBgn0262714.1.mrna1;Target=FBgn0262714.1 3919 4065 +
Chr1	stalkie_big_nohaplotig	CDS	63020602	63020719	.	+	0	Parent=FBgn0262714.1.mrna1;Target=FBgn0262714.1 1 118 +
Chr1	stalkie_big_nohaplotig	CDS	63021274	63022278	.	+	2	Parent=FBgn0262714.1.mrna1;Target=FBgn0262714.1 119 1123 +
Chr1	stalkie_big_nohaplotig	CDS	63022339	63022911	.	+	2	Parent=FBgn0262714.1.mrna1;Target=FBgn0262714.1 1124 1696 +
Chr1	stalkie_big_nohaplotig	CDS	63022977	63024481	.	+	2	Parent=FBgn0262714.1.mrna1;Target=FBgn0262714.1 1697 3201 +
Chr1	stalkie_big_nohaplotig	CDS	63024537	63024697	.	+	0	Parent=FBgn0262714.1.mrna1;Target=FBgn0262714.1 3202 3362 +
Chr1	stalkie_big_nohaplotig	CDS	63024775	63025054	.	+	1	Parent=FBgn0262714.1.mrna1;Target=FBgn0262714.1 3363 3642 +
Chr1	stalkie_big_nohaplotig	CDS	63025109	63025279	.	+	0	Parent=FBgn0262714.1.mrna1;Target=FBgn0262714.1 3643 3813 +
Chr1	stalkie_big_nohaplotig	CDS	63025335	63025439	.	+	0	Parent=FBgn0262714.1.mrna1;Target=FBgn0262714.1 3814 3918 +
Chr1	stalkie_big_nohaplotig	CDS	63025504	63025650	.	+	0	Parent=FBgn0262714.1.mrna1;Target=FBgn0262714.1 3919 4065 +
Chr1	gffcl	locus	63027523	63028438	.	-	.	ID=RLOC_00008480;geneIDs=FBgn0036314.1.path1;transcripts=FBgn0036314.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63027523	63028438	.	-	.	ID=FBgn0036314.1.mrna1;geneID=FBgn0036314.1.path1;Name=FBgn0036314.1;Dir=sensecoverage=100.0;identity=99.3;matches=852;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008480
Chr1	stalkie_big_nohaplotig	exon	63027523	63028352	99	-	.	Parent=FBgn0036314.1.mrna1;Target=FBgn0036314.1 29 858 +
Chr1	stalkie_big_nohaplotig	exon	63028411	63028438	96	-	.	Parent=FBgn0036314.1.mrna1;Target=FBgn0036314.1 1 28 +
Chr1	stalkie_big_nohaplotig	CDS	63027523	63028352	.	-	2	Parent=FBgn0036314.1.mrna1;Target=FBgn0036314.1 29 858 +
Chr1	stalkie_big_nohaplotig	CDS	63028411	63028438	.	-	0	Parent=FBgn0036314.1.mrna1;Target=FBgn0036314.1 1 28 +
Chr1	gffcl	locus	63028993	63042514	.	+	.	ID=RLOC_00008481;geneIDs=comp163902_c0_seq1.path1;transcripts=comp163902_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63028993	63042514	.	+	.	ID=comp163902_c0_seq1.mrna1;geneID=comp163902_c0_seq1.path1;Name=comp163902_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=3943;mismatches=9;indels=4;unknowns=0;locus=RLOC_00008481
Chr1	stalkie_big_nohaplotig	exon	63028993	63029318	98	+	.	Parent=comp163902_c0_seq1.mrna1;Target=comp163902_c0_seq1 3631 3954 -
Chr1	stalkie_big_nohaplotig	exon	63038887	63042514	99	+	.	Parent=comp163902_c0_seq1.mrna1;Target=comp163902_c0_seq1 1 3630 -
Chr1	stalkie_big_nohaplotig	CDS	63029042	63029318	.	+	0	Parent=comp163902_c0_seq1.mrna1;Target=comp163902_c0_seq1 3631 3907 .
Chr1	stalkie_big_nohaplotig	CDS	63038887	63039214	.	+	2	Parent=comp163902_c0_seq1.mrna1;Target=comp163902_c0_seq1 3302 3630 .
Chr1	gffcl	locus	63035683	63036770	.	+	.	ID=RLOC_00008482;geneIDs=comp616502_c0_seq1.path1;transcripts=comp616502_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63035683	63036770	.	+	.	ID=comp616502_c0_seq1.mrna1;geneID=comp616502_c0_seq1.path1;Name=comp616502_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1087;mismatches=1;indels=0;unknowns=0;Target=comp616502_c0_seq1 1088 1 .;CDS_Target=comp616502_c0_seq1 98 3 .;locus=RLOC_00008482
Chr1	stalkie_big_nohaplotig	exon	63035683	63036770	99	+	.	Parent=comp616502_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	63035685	63035780	.	+	0	Parent=comp616502_c0_seq1.mrna1
Chr1	gffcl	locus	63042852	63051337	.	+	.	ID=RLOC_00008483;geneIDs=ORF212.path1,FBgn0260965.path1;transcripts=FBgn0260965.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63045252	63051337	.	+	.	ID=FBgn0260965.mrna1;geneID=FBgn0260965.path1;Name=FBgn0260965;Dir=sensecoverage=100.0;identity=99.7;matches=3450;mismatches=9;indels=0;unknowns=0;locus=RLOC_00008483
Chr1	stalkie_big_nohaplotig	exon	63045252	63045795	99	+	.	Parent=FBgn0260965.mrna1;Target=FBgn0260965 1 544 +
Chr1	stalkie_big_nohaplotig	exon	63045857	63046012	97	+	.	Parent=FBgn0260965.mrna1;Target=FBgn0260965 545 700 +
Chr1	stalkie_big_nohaplotig	exon	63046069	63046307	100	+	.	Parent=FBgn0260965.mrna1;Target=FBgn0260965 701 939 +
Chr1	stalkie_big_nohaplotig	exon	63046367	63046701	100	+	.	Parent=FBgn0260965.mrna1;Target=FBgn0260965 940 1274 +
Chr1	stalkie_big_nohaplotig	exon	63046765	63046843	100	+	.	Parent=FBgn0260965.mrna1;Target=FBgn0260965 1275 1353 +
Chr1	stalkie_big_nohaplotig	exon	63046904	63047354	100	+	.	Parent=FBgn0260965.mrna1;Target=FBgn0260965 1354 1804 +
Chr1	stalkie_big_nohaplotig	exon	63047421	63047478	100	+	.	Parent=FBgn0260965.mrna1;Target=FBgn0260965 1805 1862 +
Chr1	stalkie_big_nohaplotig	exon	63047547	63047761	100	+	.	Parent=FBgn0260965.mrna1;Target=FBgn0260965 1863 2077 +
Chr1	stalkie_big_nohaplotig	exon	63047824	63048311	100	+	.	Parent=FBgn0260965.mrna1;Target=FBgn0260965 2078 2565 +
Chr1	stalkie_big_nohaplotig	exon	63048376	63048538	100	+	.	Parent=FBgn0260965.mrna1;Target=FBgn0260965 2566 2728 +
Chr1	stalkie_big_nohaplotig	exon	63050466	63050669	100	+	.	Parent=FBgn0260965.mrna1;Target=FBgn0260965 2729 2932 +
Chr1	stalkie_big_nohaplotig	exon	63050740	63051077	99	+	.	Parent=FBgn0260965.mrna1;Target=FBgn0260965 2933 3270 +
Chr1	stalkie_big_nohaplotig	exon	63051149	63051337	100	+	.	Parent=FBgn0260965.mrna1;Target=FBgn0260965 3271 3459 +
Chr1	stalkie_big_nohaplotig	CDS	63045252	63045795	.	+	0	Parent=FBgn0260965.mrna1;Target=FBgn0260965 1 544 +
Chr1	stalkie_big_nohaplotig	CDS	63045857	63046012	.	+	2	Parent=FBgn0260965.mrna1;Target=FBgn0260965 545 700 +
Chr1	stalkie_big_nohaplotig	CDS	63046069	63046307	.	+	2	Parent=FBgn0260965.mrna1;Target=FBgn0260965 701 939 +
Chr1	stalkie_big_nohaplotig	CDS	63046367	63046701	.	+	0	Parent=FBgn0260965.mrna1;Target=FBgn0260965 940 1274 +
Chr1	stalkie_big_nohaplotig	CDS	63046765	63046843	.	+	1	Parent=FBgn0260965.mrna1;Target=FBgn0260965 1275 1353 +
Chr1	stalkie_big_nohaplotig	CDS	63046904	63047354	.	+	0	Parent=FBgn0260965.mrna1;Target=FBgn0260965 1354 1804 +
Chr1	stalkie_big_nohaplotig	CDS	63047421	63047478	.	+	2	Parent=FBgn0260965.mrna1;Target=FBgn0260965 1805 1862 +
Chr1	stalkie_big_nohaplotig	CDS	63047547	63047761	.	+	1	Parent=FBgn0260965.mrna1;Target=FBgn0260965 1863 2077 +
Chr1	stalkie_big_nohaplotig	CDS	63047824	63048311	.	+	2	Parent=FBgn0260965.mrna1;Target=FBgn0260965 2078 2565 +
Chr1	stalkie_big_nohaplotig	CDS	63048376	63048538	.	+	0	Parent=FBgn0260965.mrna1;Target=FBgn0260965 2566 2728 +
Chr1	stalkie_big_nohaplotig	CDS	63050466	63050669	.	+	2	Parent=FBgn0260965.mrna1;Target=FBgn0260965 2729 2932 +
Chr1	stalkie_big_nohaplotig	CDS	63050740	63051077	.	+	2	Parent=FBgn0260965.mrna1;Target=FBgn0260965 2933 3270 +
Chr1	stalkie_big_nohaplotig	CDS	63051149	63051337	.	+	0	Parent=FBgn0260965.mrna1;Target=FBgn0260965 3271 3459 +
Chr1	gffcl	locus	63050147	63050398	.	+	.	ID=RLOC_00008484;geneIDs=comp154183_c0_seq1.path2;transcripts=comp154183_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	63050147	63050398	.	+	.	ID=comp154183_c0_seq1.mrna2;geneID=comp154183_c0_seq1.path2;Name=comp154183_c0_seq1;Dir=indeterminatecoverage=35.8;identity=100.0;matches=252;mismatches=0;indels=0;unknowns=0;Target=comp154183_c0_seq1 703 452 .;locus=RLOC_00008484
Chr1	stalkie_big_nohaplotig	exon	63050147	63050398	100	+	.	Parent=comp154183_c0_seq1.mrna2
Chr1	gffcl	locus	63052175	63054861	.	-	.	ID=RLOC_00008485;geneIDs=FBgn0030359.1.path1;transcripts=FBgn0030359.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63052175	63054861	.	-	.	ID=FBgn0030359.1.mrna1;geneID=FBgn0030359.1.path1;Name=FBgn0030359.1;Dir=sensecoverage=100.0;identity=99.9;matches=2113;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008485
Chr1	stalkie_big_nohaplotig	exon	63052175	63052627	99	-	.	Parent=FBgn0030359.1.mrna1;Target=FBgn0030359.1 1663 2115 +
Chr1	stalkie_big_nohaplotig	exon	63052692	63052875	100	-	.	Parent=FBgn0030359.1.mrna1;Target=FBgn0030359.1 1479 1662 +
Chr1	stalkie_big_nohaplotig	exon	63052967	63053519	100	-	.	Parent=FBgn0030359.1.mrna1;Target=FBgn0030359.1 926 1478 +
Chr1	stalkie_big_nohaplotig	exon	63053588	63054224	99	-	.	Parent=FBgn0030359.1.mrna1;Target=FBgn0030359.1 289 925 +
Chr1	stalkie_big_nohaplotig	exon	63054452	63054523	100	-	.	Parent=FBgn0030359.1.mrna1;Target=FBgn0030359.1 217 288 +
Chr1	stalkie_big_nohaplotig	exon	63054589	63054692	100	-	.	Parent=FBgn0030359.1.mrna1;Target=FBgn0030359.1 113 216 +
Chr1	stalkie_big_nohaplotig	exon	63054750	63054861	100	-	.	Parent=FBgn0030359.1.mrna1;Target=FBgn0030359.1 1 112 +
Chr1	stalkie_big_nohaplotig	CDS	63052175	63052627	.	-	0	Parent=FBgn0030359.1.mrna1;Target=FBgn0030359.1 1663 2115 +
Chr1	stalkie_big_nohaplotig	CDS	63052692	63052875	.	-	1	Parent=FBgn0030359.1.mrna1;Target=FBgn0030359.1 1479 1662 +
Chr1	stalkie_big_nohaplotig	CDS	63052967	63053519	.	-	2	Parent=FBgn0030359.1.mrna1;Target=FBgn0030359.1 926 1478 +
Chr1	stalkie_big_nohaplotig	CDS	63053588	63054224	.	-	0	Parent=FBgn0030359.1.mrna1;Target=FBgn0030359.1 289 925 +
Chr1	stalkie_big_nohaplotig	CDS	63054452	63054523	.	-	0	Parent=FBgn0030359.1.mrna1;Target=FBgn0030359.1 217 288 +
Chr1	stalkie_big_nohaplotig	CDS	63054589	63054692	.	-	2	Parent=FBgn0030359.1.mrna1;Target=FBgn0030359.1 113 216 +
Chr1	stalkie_big_nohaplotig	CDS	63054750	63054861	.	-	0	Parent=FBgn0030359.1.mrna1;Target=FBgn0030359.1 1 112 +
Chr1	gffcl	locus	63055101	63055633	.	-	.	ID=RLOC_00008486;geneIDs=comp143490_c0_seq1.path1;transcripts=comp143490_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63055101	63055633	.	-	.	ID=comp143490_c0_seq1.mrna1;geneID=comp143490_c0_seq1.path1;Name=comp143490_c0_seq1;Dir=indeterminatecoverage=96.4;identity=99.6;matches=531;mismatches=2;indels=0;unknowns=0;Target=comp143490_c0_seq1 533 1 .;CDS_Target=comp143490_c0_seq1 501 391 .;locus=RLOC_00008486
Chr1	stalkie_big_nohaplotig	exon	63055101	63055633	99	-	.	Parent=comp143490_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	63055133	63055243	.	-	0	Parent=comp143490_c0_seq1.mrna1
Chr1	gffcl	locus	63059209	63059494	.	+	.	ID=RLOC_00008487;geneIDs=comp122374_c0_seq1.path1;transcripts=comp122374_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63059209	63059494	.	+	.	ID=comp122374_c0_seq1.mrna1;geneID=comp122374_c0_seq1.path1;Name=comp122374_c0_seq1;Dir=indeterminatecoverage=64.1;identity=99.7;matches=285;mismatches=1;indels=0;unknowns=0;Target=comp122374_c0_seq1 302 17 .;CDS_Target=comp122374_c0_seq1 242 150 .;locus=RLOC_00008487
Chr1	stalkie_big_nohaplotig	exon	63059209	63059494	99	+	.	Parent=comp122374_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	63059342	63059434	.	+	0	Parent=comp122374_c0_seq1.mrna1
Chr1	gffcl	locus	63059619	63062275	.	-	.	ID=RLOC_00008488;geneIDs=FBgn0030359.2.path1;transcripts=FBgn0030359.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63059619	63062275	.	-	.	ID=FBgn0030359.2.mrna1;geneID=FBgn0030359.2.path1;Name=FBgn0030359.2;Dir=sensecoverage=100.0;identity=99.7;matches=2228;mismatches=7;indels=0;unknowns=0;locus=RLOC_00008488
Chr1	stalkie_big_nohaplotig	exon	63059619	63060116	99	-	.	Parent=FBgn0030359.2.mrna1;Target=FBgn0030359.2 1738 2235 +
Chr1	stalkie_big_nohaplotig	exon	63060181	63060424	99	-	.	Parent=FBgn0030359.2.mrna1;Target=FBgn0030359.2 1494 1737 +
Chr1	stalkie_big_nohaplotig	exon	63060480	63061053	99	-	.	Parent=FBgn0030359.2.mrna1;Target=FBgn0030359.2 920 1493 +
Chr1	stalkie_big_nohaplotig	exon	63061167	63061779	99	-	.	Parent=FBgn0030359.2.mrna1;Target=FBgn0030359.2 307 919 +
Chr1	stalkie_big_nohaplotig	exon	63061836	63061907	98	-	.	Parent=FBgn0030359.2.mrna1;Target=FBgn0030359.2 235 306 +
Chr1	stalkie_big_nohaplotig	exon	63061980	63062083	99	-	.	Parent=FBgn0030359.2.mrna1;Target=FBgn0030359.2 131 234 +
Chr1	stalkie_big_nohaplotig	exon	63062146	63062275	100	-	.	Parent=FBgn0030359.2.mrna1;Target=FBgn0030359.2 1 130 +
Chr1	stalkie_big_nohaplotig	CDS	63059619	63060116	.	-	0	Parent=FBgn0030359.2.mrna1;Target=FBgn0030359.2 1738 2235 +
Chr1	stalkie_big_nohaplotig	CDS	63060181	63060424	.	-	1	Parent=FBgn0030359.2.mrna1;Target=FBgn0030359.2 1494 1737 +
Chr1	stalkie_big_nohaplotig	CDS	63060480	63061053	.	-	2	Parent=FBgn0030359.2.mrna1;Target=FBgn0030359.2 920 1493 +
Chr1	stalkie_big_nohaplotig	CDS	63061167	63061779	.	-	0	Parent=FBgn0030359.2.mrna1;Target=FBgn0030359.2 307 919 +
Chr1	stalkie_big_nohaplotig	CDS	63061836	63061907	.	-	0	Parent=FBgn0030359.2.mrna1;Target=FBgn0030359.2 235 306 +
Chr1	stalkie_big_nohaplotig	CDS	63061980	63062083	.	-	2	Parent=FBgn0030359.2.mrna1;Target=FBgn0030359.2 131 234 +
Chr1	stalkie_big_nohaplotig	CDS	63062146	63062275	.	-	0	Parent=FBgn0030359.2.mrna1;Target=FBgn0030359.2 1 130 +
Chr1	gffcl	locus	63066338	63067241	.	+	.	ID=RLOC_00008489;geneIDs=comp151816_c2_seq1.path1;transcripts=comp151816_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63066338	63067241	.	+	.	ID=comp151816_c2_seq1.mrna1;geneID=comp151816_c2_seq1.path1;Name=comp151816_c2_seq1;Dir=indeterminatecoverage=99.0;identity=99.7;matches=902;mismatches=2;indels=1;unknowns=0;Target=comp151816_c2_seq1 905 1 .;CDS_Target=comp151816_c2_seq1 866 735 .;locus=RLOC_00008489
Chr1	stalkie_big_nohaplotig	exon	63066338	63067241	99	+	.	Parent=comp151816_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	63067071	63067202	.	+	0	Parent=comp151816_c2_seq1.mrna1
Chr1	gffcl	locus	63067383	63393221	.	.	.	ID=RLOC_00008490;geneIDs=FBgn0004449.1.path1,comp135242_c0_seq1.path1,comp163743_c1_seq1.path1;transcripts=comp163743_c1_seq1.mrna1,FBgn0004449.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63068032	63393221	.	-	.	ID=comp163743_c1_seq1.mrna1;geneID=comp163743_c1_seq1.path1;Name=comp163743_c1_seq1;Dir=antisensecoverage=96.8;identity=99.9;matches=8861;mismatches=6;indels=6;unknowns=0;locus=RLOC_00008490
Chr1	stalkie_big_nohaplotig	exon	63068032	63074462	99	-	.	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 3 6433 -
Chr1	stalkie_big_nohaplotig	exon	63076850	63077057	100	-	.	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 6434 6641 -
Chr1	stalkie_big_nohaplotig	exon	63077127	63077672	100	-	.	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 6642 7187 -
Chr1	stalkie_big_nohaplotig	exon	63077828	63078239	99	-	.	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 7188 7599 -
Chr1	stalkie_big_nohaplotig	exon	63078599	63078882	100	-	.	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 7600 7883 -
Chr1	stalkie_big_nohaplotig	exon	63085075	63085425	100	-	.	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 7884 8234 -
Chr1	stalkie_big_nohaplotig	exon	63085493	63085765	100	-	.	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 8235 8507 -
Chr1	stalkie_big_nohaplotig	exon	63167712	63167897	100	-	.	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 8508 8693 -
Chr1	stalkie_big_nohaplotig	exon	63355723	63355836	100	-	.	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 8694 8807 -
Chr1	stalkie_big_nohaplotig	exon	63358832	63358839	100	-	.	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 8834 8841 -
Chr1	stalkie_big_nohaplotig	exon	63361205	63361211	100	-	.	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 8842 8848 -
Chr1	stalkie_big_nohaplotig	exon	63367031	63367034	100	-	.	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 8849 8852 -
Chr1	stalkie_big_nohaplotig	exon	63367323	63367329	100	-	.	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 8853 8859 -
Chr1	stalkie_big_nohaplotig	exon	63373609	63373625	60	-	.	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 8860 8882 -
Chr1	stalkie_big_nohaplotig	exon	63386372	63386375	100	-	.	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 8883 8886 -
Chr1	stalkie_big_nohaplotig	exon	63393190	63393196	100	-	.	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 8887 8893 -
Chr1	stalkie_big_nohaplotig	exon	63393215	63393221	100	-	.	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 8942 8948 -
Chr1	stalkie_big_nohaplotig	CDS	63068855	63074462	.	-	1	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 826 6433 .
Chr1	stalkie_big_nohaplotig	CDS	63076850	63077057	.	-	2	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 6434 6641 .
Chr1	stalkie_big_nohaplotig	CDS	63077127	63077672	.	-	2	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 6642 7187 .
Chr1	stalkie_big_nohaplotig	CDS	63077828	63078239	.	-	0	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 7188 7599 .
Chr1	stalkie_big_nohaplotig	CDS	63078599	63078882	.	-	2	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 7600 7883 .
Chr1	stalkie_big_nohaplotig	CDS	63085075	63085425	.	-	2	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 7884 8234 .
Chr1	stalkie_big_nohaplotig	CDS	63085493	63085765	.	-	2	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 8235 8507 .
Chr1	stalkie_big_nohaplotig	CDS	63167712	63167835	.	-	0	Parent=comp163743_c1_seq1.mrna1;Target=comp163743_c1_seq1 8508 8631 .
Chr1	stalkie_big_nohaplotig	mRNA	63068858	63224909	.	-	.	ID=FBgn0004449.1.mrna1;geneID=FBgn0004449.1.path1;Name=FBgn0004449.1;Dir=indeterminatecoverage=97.7;identity=100.0;matches=7890;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008490
Chr1	stalkie_big_nohaplotig	exon	63068858	63074462	99	-	.	Parent=FBgn0004449.1.mrna1;Target=FBgn0004449.1 8082 2478 .
Chr1	stalkie_big_nohaplotig	exon	63076850	63077057	100	-	.	Parent=FBgn0004449.1.mrna1;Target=FBgn0004449.1 2477 2270 .
Chr1	stalkie_big_nohaplotig	exon	63077127	63077672	100	-	.	Parent=FBgn0004449.1.mrna1;Target=FBgn0004449.1 2269 1724 .
Chr1	stalkie_big_nohaplotig	exon	63077828	63078239	99	-	.	Parent=FBgn0004449.1.mrna1;Target=FBgn0004449.1 1723 1312 .
Chr1	stalkie_big_nohaplotig	exon	63078599	63078882	100	-	.	Parent=FBgn0004449.1.mrna1;Target=FBgn0004449.1 1311 1028 .
Chr1	stalkie_big_nohaplotig	exon	63085075	63085425	100	-	.	Parent=FBgn0004449.1.mrna1;Target=FBgn0004449.1 1027 677 .
Chr1	stalkie_big_nohaplotig	exon	63085493	63085765	100	-	.	Parent=FBgn0004449.1.mrna1;Target=FBgn0004449.1 676 404 .
Chr1	stalkie_big_nohaplotig	exon	63167712	63167898	100	-	.	Parent=FBgn0004449.1.mrna1;Target=FBgn0004449.1 403 217 .
Chr1	stalkie_big_nohaplotig	exon	63174211	63174222	91	-	.	Parent=FBgn0004449.1.mrna1;Target=FBgn0004449.1 216 205 .
Chr1	stalkie_big_nohaplotig	exon	63178332	63178338	100	-	.	Parent=FBgn0004449.1.mrna1;Target=FBgn0004449.1 204 198 .
Chr1	stalkie_big_nohaplotig	exon	63224902	63224909	100	-	.	Parent=FBgn0004449.1.mrna1;Target=FBgn0004449.1 197 190 .
Chr1	stalkie_big_nohaplotig	CDS	63068858	63074462	.	-	1	Parent=FBgn0004449.1.mrna1;Target=FBgn0004449.1 8082 2478 .
Chr1	stalkie_big_nohaplotig	CDS	63076850	63077057	.	-	2	Parent=FBgn0004449.1.mrna1;Target=FBgn0004449.1 2477 2270 .
Chr1	stalkie_big_nohaplotig	CDS	63077127	63077672	.	-	2	Parent=FBgn0004449.1.mrna1;Target=FBgn0004449.1 2269 1724 .
Chr1	stalkie_big_nohaplotig	CDS	63077828	63078239	.	-	0	Parent=FBgn0004449.1.mrna1;Target=FBgn0004449.1 1723 1312 .
Chr1	stalkie_big_nohaplotig	CDS	63078599	63078882	.	-	2	Parent=FBgn0004449.1.mrna1;Target=FBgn0004449.1 1311 1028 .
Chr1	stalkie_big_nohaplotig	CDS	63085075	63085425	.	-	2	Parent=FBgn0004449.1.mrna1;Target=FBgn0004449.1 1027 677 .
Chr1	stalkie_big_nohaplotig	CDS	63085493	63085765	.	-	2	Parent=FBgn0004449.1.mrna1;Target=FBgn0004449.1 676 404 .
Chr1	stalkie_big_nohaplotig	CDS	63167712	63167898	.	-	0	Parent=FBgn0004449.1.mrna1;Target=FBgn0004449.1 403 217 .
Chr1	stalkie_big_nohaplotig	CDS	63174211	63174222	.	-	0	Parent=FBgn0004449.1.mrna1;Target=FBgn0004449.1 216 205 .
Chr1	stalkie_big_nohaplotig	CDS	63178332	63178338	.	-	1	Parent=FBgn0004449.1.mrna1;Target=FBgn0004449.1 204 198 .
Chr1	stalkie_big_nohaplotig	CDS	63224902	63224909	.	-	0	Parent=FBgn0004449.1.mrna1;Target=FBgn0004449.1 197 190 .
Chr1	gffcl	locus	63080263	63083491	.	-	.	ID=RLOC_00008491;geneIDs=comp162626_c3_seq1.path1;transcripts=comp162626_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63080263	63083491	.	-	.	ID=comp162626_c3_seq1.mrna1;geneID=comp162626_c3_seq1.path1;Name=comp162626_c3_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=3225;mismatches=4;indels=0;unknowns=0;Target=comp162626_c3_seq1 3231 3 .;CDS_Target=comp162626_c3_seq1 3203 99 .;locus=RLOC_00008491
Chr1	stalkie_big_nohaplotig	exon	63080263	63083491	99	-	.	Parent=comp162626_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	63080291	63083395	.	-	0	Parent=comp162626_c3_seq1.mrna1
Chr1	gffcl	locus	63283454	63284614	.	-	.	ID=RLOC_00008492;geneIDs=comp152521_c0_seq1.path1;transcripts=comp152521_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63283454	63284614	.	-	.	ID=comp152521_c0_seq1.mrna1;geneID=comp152521_c0_seq1.path1;Name=comp152521_c0_seq1;Dir=indeterminatecoverage=97.4;identity=97.5;matches=1152;mismatches=9;indels=21;unknowns=0;Target=comp152521_c0_seq1 1182 1 .;CDS_Target=comp152521_c0_seq1 1124 918 .;locus=RLOC_00008492
Chr1	stalkie_big_nohaplotig	exon	63283454	63284614	97	-	.	Parent=comp152521_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	63283512	63283698	.	-	0	Parent=comp152521_c0_seq1.mrna1
Chr1	gffcl	locus	63287773	63287821	.	+	.	ID=RLOC_00008493;geneIDs=comp161501_c0_seq1.path1;transcripts=comp161501_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63287773	63287821	.	+	.	ID=comp161501_c0_seq1.mrna1;geneID=comp161501_c0_seq1.path1;Name=comp161501_c0_seq1;Dir=indeterminatecoverage=1.2;identity=100.0;matches=49;mismatches=0;indels=0;unknowns=0;Target=comp161501_c0_seq1 50 2 .;locus=RLOC_00008493
Chr1	stalkie_big_nohaplotig	exon	63287773	63287821	100	+	.	Parent=comp161501_c0_seq1.mrna1
Chr1	gffcl	locus	63289206	63290284	.	+	.	ID=RLOC_00008494;geneIDs=comp151654_c0_seq1.path1;transcripts=comp151654_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63289206	63290284	.	+	.	ID=comp151654_c0_seq1.mrna1;geneID=comp151654_c0_seq1.path1;Name=comp151654_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.3;matches=1072;mismatches=7;indels=1;unknowns=0;Target=comp151654_c0_seq1 1080 1 .;CDS_Target=comp151654_c0_seq1 547 257 .;locus=RLOC_00008494
Chr1	stalkie_big_nohaplotig	exon	63289206	63290284	99	+	.	Parent=comp151654_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	63289462	63289752	.	+	0	Parent=comp151654_c0_seq1.mrna1
Chr1	gffcl	locus	63291122	63293959	.	+	.	ID=RLOC_00008495;geneIDs=ORF134.path1;transcripts=ORF134.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63291122	63293959	.	+	.	ID=ORF134.mrna1;geneID=ORF134.path1;Name=ORF134;Dir=indeterminatecoverage=100.0;identity=99.0;matches=2822;mismatches=16;indels=12;unknowns=0;Target=ORF134 2850 1 .;locus=RLOC_00008495
Chr1	stalkie_big_nohaplotig	exon	63291122	63293959	99	+	.	Parent=ORF134.mrna1
Chr1	stalkie_big_nohaplotig	CDS	63291122	63293959	.	+	0	Parent=ORF134.mrna1
Chr1	gffcl	locus	63355912	63357796	.	+	.	ID=RLOC_00008496;geneIDs=comp156445_c0_seq1.path1;transcripts=comp156445_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63355912	63357796	.	+	.	ID=comp156445_c0_seq1.mrna1;geneID=comp156445_c0_seq1.path1;Name=comp156445_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1883;mismatches=2;indels=0;unknowns=0;Target=comp156445_c0_seq1 1885 1 .;CDS_Target=comp156445_c0_seq1 198 1 .;locus=RLOC_00008496
Chr1	stalkie_big_nohaplotig	exon	63355912	63357796	99	+	.	Parent=comp156445_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	63355912	63356109	.	+	0	Parent=comp156445_c0_seq1.mrna1
Chr1	gffcl	locus	63386683	63387080	.	-	.	ID=RLOC_00008497;geneIDs=comp1661643_c0_seq1.path1;transcripts=comp1661643_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63386683	63387080	.	-	.	ID=comp1661643_c0_seq1.mrna1;geneID=comp1661643_c0_seq1.path1;Name=comp1661643_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=392;mismatches=6;indels=1;unknowns=0;Target=comp1661643_c0_seq1 399 1 .;CDS_Target=comp1661643_c0_seq1 397 290 .;locus=RLOC_00008497
Chr1	stalkie_big_nohaplotig	exon	63386683	63387080	98	-	.	Parent=comp1661643_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	63386685	63386791	.	-	0	Parent=comp1661643_c0_seq1.mrna1
Chr1	gffcl	locus	63423562	63425121	.	+	.	ID=RLOC_00008498;geneIDs=FBgn0035218.1.path1;transcripts=FBgn0035218.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63423562	63425121	.	+	.	ID=FBgn0035218.1.mrna1;geneID=FBgn0035218.1.path1;Name=FBgn0035218.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1550;mismatches=10;indels=0;unknowns=0;Target=FBgn0035218.1 1560 1 .;locus=RLOC_00008498
Chr1	stalkie_big_nohaplotig	exon	63423562	63425121	99	+	.	Parent=FBgn0035218.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	63423562	63425121	.	+	0	Parent=FBgn0035218.1.mrna1
Chr1	gffcl	locus	63492858	63493871	.	-	.	ID=RLOC_00008499;geneIDs=FBgn0037166.1.path1;transcripts=FBgn0037166.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63492858	63493871	.	-	.	ID=FBgn0037166.1.mrna1;geneID=FBgn0037166.1.path1;Name=FBgn0037166.1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1004;mismatches=10;indels=0;unknowns=0;Target=FBgn0037166.1 1014 1 .;locus=RLOC_00008499
Chr1	stalkie_big_nohaplotig	exon	63492858	63493871	99	-	.	Parent=FBgn0037166.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	63492858	63493871	.	-	0	Parent=FBgn0037166.1.mrna1
Chr1	gffcl	locus	63503220	63504158	.	-	.	ID=RLOC_00008500;geneIDs=FBgn0037165.1.path1;transcripts=FBgn0037165.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63503220	63504158	.	-	.	ID=FBgn0037165.1.mrna1;geneID=FBgn0037165.1.path1;Name=FBgn0037165.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=937;mismatches=2;indels=0;unknowns=0;Target=FBgn0037165.1 939 1 .;locus=RLOC_00008500
Chr1	stalkie_big_nohaplotig	exon	63503220	63504158	99	-	.	Parent=FBgn0037165.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	63503220	63504158	.	-	0	Parent=FBgn0037165.1.mrna1
Chr1	gffcl	locus	63508167	63509189	.	-	.	ID=RLOC_00008501;geneIDs=FBgn0037164.1.path1;transcripts=FBgn0037164.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63508167	63509189	.	-	.	ID=FBgn0037164.1.mrna1;geneID=FBgn0037164.1.path1;Name=FBgn0037164.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1016;mismatches=7;indels=0;unknowns=0;Target=FBgn0037164.1 1023 1 .;locus=RLOC_00008501
Chr1	stalkie_big_nohaplotig	exon	63508167	63509189	99	-	.	Parent=FBgn0037164.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	63508167	63509189	.	-	0	Parent=FBgn0037164.1.mrna1
Chr1	gffcl	locus	63527108	63527893	.	+	.	ID=RLOC_00008502;geneIDs=FBgn0037163.1.path1;transcripts=FBgn0037163.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63527108	63527893	.	+	.	ID=FBgn0037163.1.mrna1;geneID=FBgn0037163.1.path1;Name=FBgn0037163.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=783;mismatches=3;indels=0;unknowns=0;Target=FBgn0037163.1 786 1 .;locus=RLOC_00008502
Chr1	stalkie_big_nohaplotig	exon	63527108	63527893	99	+	.	Parent=FBgn0037163.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	63527108	63527893	.	+	0	Parent=FBgn0037163.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63615980	63616457	.	+	.	ID=comp674165_c0_seq1.mrna1;geneID=comp674165_c0_seq1.path1;Name=comp674165_c0_seq1;Dir=sensecoverage=100.0;identity=99.1;matches=325;mismatches=3;indels=0;unknowns=0;Target=comp674165_c0_seq1 257 328 +;locus=RLOC_00008503
Chr1	stalkie_big_nohaplotig	exon	63615980	63616124	98	+	.	Parent=comp674165_c0_seq1.mrna1;Target=comp674165_c0_seq1 1 145 +
Chr1	stalkie_big_nohaplotig	exon	63616275	63616457	99	+	.	Parent=comp674165_c0_seq1.mrna1;Target=comp674165_c0_seq1 146 328 +
Chr1	stalkie_big_nohaplotig	CDS	63616386	63616457	.	+	0	Parent=comp674165_c0_seq1.mrna1
Chr1	gffcl	locus	63663061	63666109	.	-	.	ID=RLOC_00008504;geneIDs=comp156083_c0_seq1.path2;transcripts=comp156083_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	63663061	63666109	.	-	.	ID=comp156083_c0_seq1.mrna2;geneID=comp156083_c0_seq1.path2;Name=comp156083_c0_seq1;Dir=sensecoverage=96.7;identity=95.9;matches=1165;mismatches=14;indels=36;unknowns=0;locus=RLOC_00008504
Chr1	stalkie_big_nohaplotig	exon	63663061	63663562	99	-	.	Parent=comp156083_c0_seq1.mrna2;Target=comp156083_c0_seq1 755 1256 +
Chr1	stalkie_big_nohaplotig	exon	63663627	63663973	99	-	.	Parent=comp156083_c0_seq1.mrna2;Target=comp156083_c0_seq1 408 754 +
Chr1	stalkie_big_nohaplotig	exon	63665780	63666109	87	-	.	Parent=comp156083_c0_seq1.mrna2;Target=comp156083_c0_seq1 42 407 +
Chr1	stalkie_big_nohaplotig	CDS	63663269	63663562	.	-	0	Parent=comp156083_c0_seq1.mrna2;Target=comp156083_c0_seq1 755 1048 +
Chr1	stalkie_big_nohaplotig	CDS	63663627	63663973	.	-	2	Parent=comp156083_c0_seq1.mrna2;Target=comp156083_c0_seq1 408 754 +
Chr1	stalkie_big_nohaplotig	CDS	63665780	63665795	.	-	0	Parent=comp156083_c0_seq1.mrna2;Target=comp156083_c0_seq1 392 407 +
Chr1	gffcl	locus	63697153	65217020	.	-	.	ID=RLOC_00008505;geneIDs=comp149262_c1_seq1.path1;transcripts=comp149262_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63697153	65217020	.	-	.	ID=comp149262_c1_seq1.mrna1;geneID=comp149262_c1_seq1.path1;Name=comp149262_c1_seq1;Dir=indeterminatecoverage=94.7;identity=93.7;matches=446;mismatches=7;indels=23;unknowns=0;Target=comp149262_c1_seq1 265 143 .;locus=RLOC_00008505
Chr1	stalkie_big_nohaplotig	exon	63697153	63697159	85	-	.	Parent=comp149262_c1_seq1.mrna1;Target=comp149262_c1_seq1 755 749 .
Chr1	stalkie_big_nohaplotig	exon	63703079	63703093	80	-	.	Parent=comp149262_c1_seq1.mrna1;Target=comp149262_c1_seq1 748 734 .
Chr1	stalkie_big_nohaplotig	exon	63706070	63706075	100	-	.	Parent=comp149262_c1_seq1.mrna1;Target=comp149262_c1_seq1 733 728 .
Chr1	stalkie_big_nohaplotig	exon	63725436	63725442	100	-	.	Parent=comp149262_c1_seq1.mrna1;Target=comp149262_c1_seq1 727 721 .
Chr1	stalkie_big_nohaplotig	exon	63731614	63731629	56	-	.	Parent=comp149262_c1_seq1.mrna1;Target=comp149262_c1_seq1 720 696 .
Chr1	stalkie_big_nohaplotig	exon	63733525	63733527	100	-	.	Parent=comp149262_c1_seq1.mrna1;Target=comp149262_c1_seq1 695 693 .
Chr1	stalkie_big_nohaplotig	exon	63747202	63747206	100	-	.	Parent=comp149262_c1_seq1.mrna1;Target=comp149262_c1_seq1 692 688 .
Chr1	stalkie_big_nohaplotig	exon	63751106	63751113	36	-	.	Parent=comp149262_c1_seq1.mrna1;Target=comp149262_c1_seq1 687 666 .
Chr1	stalkie_big_nohaplotig	exon	65216635	65217020	99	-	.	Parent=comp149262_c1_seq1.mrna1;Target=comp149262_c1_seq1 386 1 .
Chr1	stalkie_big_nohaplotig	CDS	65216756	65216878	.	-	0	Parent=comp149262_c1_seq1.mrna1
Chr1	gffcl	locus	63712108	63713995	.	+	.	ID=RLOC_00008506;geneIDs=FBgn0031853.3.path1;transcripts=FBgn0031853.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63712108	63713995	.	+	.	ID=FBgn0031853.3.mrna1;geneID=FBgn0031853.3.path1;Name=FBgn0031853.3;Dir=sensecoverage=100.0;identity=99.8;matches=1830;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008506
Chr1	stalkie_big_nohaplotig	exon	63712108	63713260	99	+	.	Parent=FBgn0031853.3.mrna1;Target=FBgn0031853.3 1 1153 +
Chr1	stalkie_big_nohaplotig	exon	63713316	63713995	99	+	.	Parent=FBgn0031853.3.mrna1;Target=FBgn0031853.3 1154 1833 +
Chr1	stalkie_big_nohaplotig	CDS	63712108	63713260	.	+	0	Parent=FBgn0031853.3.mrna1;Target=FBgn0031853.3 1 1153 +
Chr1	stalkie_big_nohaplotig	CDS	63713316	63713995	.	+	2	Parent=FBgn0031853.3.mrna1;Target=FBgn0031853.3 1154 1833 +
Chr1	gffcl	locus	63822390	63824362	.	+	.	ID=RLOC_00008507;geneIDs=FBgn0037115.1.path1;transcripts=FBgn0037115.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63822390	63824362	.	+	.	ID=FBgn0037115.1.mrna1;geneID=FBgn0037115.1.path1;Name=FBgn0037115.1;Dir=sensecoverage=100.0;identity=99.6;matches=1844;mismatches=7;indels=0;unknowns=0;locus=RLOC_00008507
Chr1	stalkie_big_nohaplotig	exon	63822390	63822837	99	+	.	Parent=FBgn0037115.1.mrna1;Target=FBgn0037115.1 1 448 +
Chr1	stalkie_big_nohaplotig	exon	63822960	63824362	99	+	.	Parent=FBgn0037115.1.mrna1;Target=FBgn0037115.1 449 1851 +
Chr1	stalkie_big_nohaplotig	CDS	63822390	63822837	.	+	0	Parent=FBgn0037115.1.mrna1;Target=FBgn0037115.1 1 448 +
Chr1	stalkie_big_nohaplotig	CDS	63822960	63824362	.	+	2	Parent=FBgn0037115.1.mrna1;Target=FBgn0037115.1 449 1851 +
Chr1	gffcl	locus	63847841	63852355	.	+	.	ID=RLOC_00008508;geneIDs=comp152120_c0_seq1.path1;transcripts=comp152120_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63847841	63852355	.	+	.	ID=comp152120_c0_seq1.mrna1;geneID=comp152120_c0_seq1.path1;Name=comp152120_c0_seq1;Dir=sensecoverage=99.9;identity=96.4;matches=933;mismatches=25;indels=10;unknowns=0;Target=comp152120_c0_seq1 483 659 +;locus=RLOC_00008508
Chr1	stalkie_big_nohaplotig	exon	63847841	63848670	96	+	.	Parent=comp152120_c0_seq1.mrna1;Target=comp152120_c0_seq1 2 839 +
Chr1	stalkie_big_nohaplotig	exon	63852227	63852355	96	+	.	Parent=comp152120_c0_seq1.mrna1;Target=comp152120_c0_seq1 840 968 +
Chr1	stalkie_big_nohaplotig	CDS	63848323	63848490	.	+	0	Parent=comp152120_c0_seq1.mrna1
Chr1	gffcl	locus	63854266	63854983	.	+	.	ID=RLOC_00008509;geneIDs=comp152258_c0_seq1.path1;transcripts=comp152258_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63854266	63854983	.	+	.	ID=comp152258_c0_seq1.mrna1;geneID=comp152258_c0_seq1.path1;Name=comp152258_c0_seq1;Dir=indeterminatecoverage=97.6;identity=99.3;matches=713;mismatches=5;indels=0;unknowns=0;Target=comp152258_c0_seq1 729 12 .;CDS_Target=comp152258_c0_seq1 371 282 .;locus=RLOC_00008509
Chr1	stalkie_big_nohaplotig	exon	63854266	63854983	99	+	.	Parent=comp152258_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	63854536	63854625	.	+	0	Parent=comp152258_c0_seq1.mrna1
Chr1	gffcl	locus	63856453	63857220	.	+	.	ID=RLOC_00008510;geneIDs=comp152674_c0_seq1.path1;transcripts=comp152674_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63856453	63857220	.	+	.	ID=comp152674_c0_seq1.mrna1;geneID=comp152674_c0_seq1.path1;Name=comp152674_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=765;mismatches=3;indels=0;unknowns=0;Target=comp152674_c0_seq1 768 1 .;CDS_Target=comp152674_c0_seq1 426 295 .;locus=RLOC_00008510
Chr1	stalkie_big_nohaplotig	exon	63856453	63857220	99	+	.	Parent=comp152674_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	63856747	63856878	.	+	0	Parent=comp152674_c0_seq1.mrna1
Chr1	gffcl	locus	63927813	63928284	.	-	.	ID=RLOC_00008511;geneIDs=comp138862_c1_seq1.path1;transcripts=comp138862_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	63927813	63928284	.	-	.	ID=comp138862_c1_seq1.mrna1;geneID=comp138862_c1_seq1.path1;Name=comp138862_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=472;mismatches=0;indels=0;unknowns=0;Target=comp138862_c1_seq1 472 1 .;CDS_Target=comp138862_c1_seq1 155 3 .;locus=RLOC_00008511
Chr1	stalkie_big_nohaplotig	exon	63927813	63928284	100	-	.	Parent=comp138862_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	63928130	63928282	.	-	0	Parent=comp138862_c1_seq1.mrna1
Chr1	gffcl	locus	64029255	64031170	.	+	.	ID=RLOC_00008512;geneIDs=comp151579_c0_seq1.path1;transcripts=comp151579_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64029255	64031170	.	+	.	ID=comp151579_c0_seq1.mrna1;geneID=comp151579_c0_seq1.path1;Name=comp151579_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.4;matches=1905;mismatches=9;indels=2;unknowns=0;Target=comp151579_c0_seq1 1916 3 .;CDS_Target=comp151579_c0_seq1 1416 1375 .;locus=RLOC_00008512
Chr1	stalkie_big_nohaplotig	exon	64029255	64031170	99	+	.	Parent=comp151579_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	64030629	64030670	.	+	0	Parent=comp151579_c0_seq1.mrna1
Chr1	gffcl	locus	64055805	64056397	.	-	.	ID=RLOC_00008513;geneIDs=Dp_FBgn0249362.path1;transcripts=Dp_FBgn0249362.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64055805	64056397	.	-	.	ID=Dp_FBgn0249362.mrna1;geneID=Dp_FBgn0249362.path1;Name=Dp_FBgn0249362;Dir=indeterminatecoverage=100.0;identity=99.3;matches=590;mismatches=3;indels=1;unknowns=0;Target=Dp_FBgn0249362 594 1 .;locus=RLOC_00008513
Chr1	stalkie_big_nohaplotig	exon	64055805	64056397	99	-	.	Parent=Dp_FBgn0249362.mrna1
Chr1	stalkie_big_nohaplotig	CDS	64055805	64056397	.	-	0	Parent=Dp_FBgn0249362.mrna1
Chr1	gffcl	locus	64068956	64070024	.	+	.	ID=RLOC_00008514;geneIDs=FBgn0037176.1.path1;transcripts=FBgn0037176.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64068956	64070024	.	+	.	ID=FBgn0037176.1.mrna1;geneID=FBgn0037176.1.path1;Name=FBgn0037176.1;Dir=sensecoverage=100.0;identity=100.0;matches=627;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008514
Chr1	stalkie_big_nohaplotig	exon	64068956	64069054	100	+	.	Parent=FBgn0037176.1.mrna1;Target=FBgn0037176.1 1 99 +
Chr1	stalkie_big_nohaplotig	exon	64069115	64069429	100	+	.	Parent=FBgn0037176.1.mrna1;Target=FBgn0037176.1 100 414 +
Chr1	stalkie_big_nohaplotig	exon	64069812	64070024	100	+	.	Parent=FBgn0037176.1.mrna1;Target=FBgn0037176.1 415 627 +
Chr1	stalkie_big_nohaplotig	CDS	64068956	64069054	.	+	0	Parent=FBgn0037176.1.mrna1;Target=FBgn0037176.1 1 99 +
Chr1	stalkie_big_nohaplotig	CDS	64069115	64069429	.	+	0	Parent=FBgn0037176.1.mrna1;Target=FBgn0037176.1 100 414 +
Chr1	stalkie_big_nohaplotig	CDS	64069812	64070024	.	+	0	Parent=FBgn0037176.1.mrna1;Target=FBgn0037176.1 415 627 +
Chr1	gffcl	locus	64081342	64081798	.	+	.	ID=RLOC_00008515;geneIDs=comp97709_c0_seq1.path1;transcripts=comp97709_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64081342	64081798	.	+	.	ID=comp97709_c0_seq1.mrna1;geneID=comp97709_c0_seq1.path1;Name=comp97709_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=451;mismatches=6;indels=0;unknowns=0;Target=comp97709_c0_seq1 457 1 .;CDS_Target=comp97709_c0_seq1 247 206 .;locus=RLOC_00008515
Chr1	stalkie_big_nohaplotig	exon	64081342	64081798	98	+	.	Parent=comp97709_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	64081547	64081588	.	+	0	Parent=comp97709_c0_seq1.mrna1
Chr1	gffcl	locus	64105780	64106892	.	-	.	ID=RLOC_00008516;geneIDs=Dp_FBgn0249247.8.path1;transcripts=Dp_FBgn0249247.8.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64105780	64106892	.	-	.	ID=Dp_FBgn0249247.8.mrna1;geneID=Dp_FBgn0249247.8.path1;Name=Dp_FBgn0249247.8;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1110;mismatches=3;indels=0;unknowns=0;Target=Dp_FBgn0249247.8 1113 1 .;locus=RLOC_00008516
Chr1	stalkie_big_nohaplotig	exon	64105780	64106892	99	-	.	Parent=Dp_FBgn0249247.8.mrna1
Chr1	stalkie_big_nohaplotig	CDS	64105780	64106892	.	-	0	Parent=Dp_FBgn0249247.8.mrna1
Chr1	gffcl	locus	64130429	64131364	.	-	.	ID=RLOC_00008517;geneIDs=comp158369_c0_seq1.path1;transcripts=comp158369_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64130429	64131364	.	-	.	ID=comp158369_c0_seq1.mrna1;geneID=comp158369_c0_seq1.path1;Name=comp158369_c0_seq1;Dir=indeterminatecoverage=99.4;identity=96.5;matches=925;mismatches=11;indels=23;unknowns=0;Target=comp158369_c0_seq1 961 3 .;CDS_Target=comp158369_c0_seq1 170 3 .;locus=RLOC_00008517
Chr1	stalkie_big_nohaplotig	exon	64130429	64131364	96	-	.	Parent=comp158369_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	64131197	64131364	.	-	0	Parent=comp158369_c0_seq1.mrna1
Chr1	gffcl	locus	64157183	64158520	.	+	.	ID=RLOC_00008518;geneIDs=FBgn0037181.1.path1;transcripts=FBgn0037181.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64157183	64158520	.	+	.	ID=FBgn0037181.1.mrna1;geneID=FBgn0037181.1.path1;Name=FBgn0037181.1;Dir=sensecoverage=100.0;identity=100.0;matches=1089;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008518
Chr1	stalkie_big_nohaplotig	exon	64157183	64157282	100	+	.	Parent=FBgn0037181.1.mrna1;Target=FBgn0037181.1 1 100 +
Chr1	stalkie_big_nohaplotig	exon	64157445	64157603	100	+	.	Parent=FBgn0037181.1.mrna1;Target=FBgn0037181.1 101 259 +
Chr1	stalkie_big_nohaplotig	exon	64157691	64158520	100	+	.	Parent=FBgn0037181.1.mrna1;Target=FBgn0037181.1 260 1089 +
Chr1	stalkie_big_nohaplotig	CDS	64157183	64157282	.	+	0	Parent=FBgn0037181.1.mrna1;Target=FBgn0037181.1 1 100 +
Chr1	stalkie_big_nohaplotig	CDS	64157445	64157603	.	+	2	Parent=FBgn0037181.1.mrna1;Target=FBgn0037181.1 101 259 +
Chr1	stalkie_big_nohaplotig	CDS	64157691	64158520	.	+	2	Parent=FBgn0037181.1.mrna1;Target=FBgn0037181.1 260 1089 +
Chr1	gffcl	locus	64160153	64162448	.	-	.	ID=RLOC_00008519;geneIDs=FBgn0031853.6.path1;transcripts=FBgn0031853.6.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64160153	64162448	.	-	.	ID=FBgn0031853.6.mrna1;geneID=FBgn0031853.6.path1;Name=FBgn0031853.6;Dir=sensecoverage=100.0;identity=99.9;matches=2179;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008519
Chr1	stalkie_big_nohaplotig	exon	64160153	64160250	98	-	.	Parent=FBgn0031853.6.mrna1;Target=FBgn0031853.6 2084 2181 +
Chr1	stalkie_big_nohaplotig	exon	64160307	64161104	100	-	.	Parent=FBgn0031853.6.mrna1;Target=FBgn0031853.6 1286 2083 +
Chr1	stalkie_big_nohaplotig	exon	64161164	64162448	99	-	.	Parent=FBgn0031853.6.mrna1;Target=FBgn0031853.6 1 1285 +
Chr1	stalkie_big_nohaplotig	CDS	64160153	64160250	.	-	2	Parent=FBgn0031853.6.mrna1;Target=FBgn0031853.6 2084 2181 +
Chr1	stalkie_big_nohaplotig	CDS	64160307	64161104	.	-	2	Parent=FBgn0031853.6.mrna1;Target=FBgn0031853.6 1286 2083 +
Chr1	stalkie_big_nohaplotig	CDS	64161164	64162448	.	-	0	Parent=FBgn0031853.6.mrna1;Target=FBgn0031853.6 1 1285 +
Chr1	gffcl	locus	64164961	64169379	.	-	.	ID=RLOC_00008520;geneIDs=FBgn0037182.1.path1;transcripts=FBgn0037182.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64164961	64169379	.	-	.	ID=FBgn0037182.1.mrna1;geneID=FBgn0037182.1.path1;Name=FBgn0037182.1;Dir=sensecoverage=100.0;identity=99.7;matches=1722;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008520
Chr1	stalkie_big_nohaplotig	exon	64164961	64165103	100	-	.	Parent=FBgn0037182.1.mrna1;Target=FBgn0037182.1 1586 1728 +
Chr1	stalkie_big_nohaplotig	exon	64165160	64165707	100	-	.	Parent=FBgn0037182.1.mrna1;Target=FBgn0037182.1 1038 1585 +
Chr1	stalkie_big_nohaplotig	exon	64167631	64167911	100	-	.	Parent=FBgn0037182.1.mrna1;Target=FBgn0037182.1 757 1037 +
Chr1	stalkie_big_nohaplotig	exon	64167968	64168117	98	-	.	Parent=FBgn0037182.1.mrna1;Target=FBgn0037182.1 607 756 +
Chr1	stalkie_big_nohaplotig	exon	64168271	64168423	99	-	.	Parent=FBgn0037182.1.mrna1;Target=FBgn0037182.1 454 606 +
Chr1	stalkie_big_nohaplotig	exon	64168816	64169139	99	-	.	Parent=FBgn0037182.1.mrna1;Target=FBgn0037182.1 130 453 +
Chr1	stalkie_big_nohaplotig	exon	64169251	64169379	100	-	.	Parent=FBgn0037182.1.mrna1;Target=FBgn0037182.1 1 129 +
Chr1	stalkie_big_nohaplotig	CDS	64164961	64165103	.	-	2	Parent=FBgn0037182.1.mrna1;Target=FBgn0037182.1 1586 1728 +
Chr1	stalkie_big_nohaplotig	CDS	64165160	64165707	.	-	1	Parent=FBgn0037182.1.mrna1;Target=FBgn0037182.1 1038 1585 +
Chr1	stalkie_big_nohaplotig	CDS	64167631	64167911	.	-	0	Parent=FBgn0037182.1.mrna1;Target=FBgn0037182.1 757 1037 +
Chr1	stalkie_big_nohaplotig	CDS	64167968	64168117	.	-	0	Parent=FBgn0037182.1.mrna1;Target=FBgn0037182.1 607 756 +
Chr1	stalkie_big_nohaplotig	CDS	64168271	64168423	.	-	0	Parent=FBgn0037182.1.mrna1;Target=FBgn0037182.1 454 606 +
Chr1	stalkie_big_nohaplotig	CDS	64168816	64169139	.	-	0	Parent=FBgn0037182.1.mrna1;Target=FBgn0037182.1 130 453 +
Chr1	stalkie_big_nohaplotig	CDS	64169251	64169379	.	-	0	Parent=FBgn0037182.1.mrna1;Target=FBgn0037182.1 1 129 +
Chr1	gffcl	locus	64173434	64174755	.	-	.	ID=RLOC_00008521;geneIDs=FBgn0037184.1.path1;transcripts=FBgn0037184.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64173434	64174755	.	-	.	ID=FBgn0037184.1.mrna1;geneID=FBgn0037184.1.path1;Name=FBgn0037184.1;Dir=sensecoverage=100.0;identity=99.3;matches=1201;mismatches=8;indels=0;unknowns=0;locus=RLOC_00008521
Chr1	stalkie_big_nohaplotig	exon	64173434	64174242	99	-	.	Parent=FBgn0037184.1.mrna1;Target=FBgn0037184.1 401 1209 +
Chr1	stalkie_big_nohaplotig	exon	64174300	64174460	98	-	.	Parent=FBgn0037184.1.mrna1;Target=FBgn0037184.1 240 400 +
Chr1	stalkie_big_nohaplotig	exon	64174517	64174755	98	-	.	Parent=FBgn0037184.1.mrna1;Target=FBgn0037184.1 1 239 +
Chr1	stalkie_big_nohaplotig	CDS	64173434	64174242	.	-	2	Parent=FBgn0037184.1.mrna1;Target=FBgn0037184.1 401 1209 +
Chr1	stalkie_big_nohaplotig	CDS	64174300	64174460	.	-	1	Parent=FBgn0037184.1.mrna1;Target=FBgn0037184.1 240 400 +
Chr1	stalkie_big_nohaplotig	CDS	64174517	64174755	.	-	0	Parent=FBgn0037184.1.mrna1;Target=FBgn0037184.1 1 239 +
Chr1	gffcl	locus	64179062	64201769	.	+	.	ID=RLOC_00008522;geneIDs=FBgn0037185.1.path1;transcripts=FBgn0037185.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64179062	64201769	.	+	.	ID=FBgn0037185.1.mrna1;geneID=FBgn0037185.1.path1;Name=FBgn0037185.1;Dir=sensecoverage=100.0;identity=99.5;matches=1266;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008522
Chr1	stalkie_big_nohaplotig	exon	64179062	64179933	99	+	.	Parent=FBgn0037185.1.mrna1;Target=FBgn0037185.1 1 872 +
Chr1	stalkie_big_nohaplotig	exon	64192122	64192245	100	+	.	Parent=FBgn0037185.1.mrna1;Target=FBgn0037185.1 873 996 +
Chr1	stalkie_big_nohaplotig	exon	64199135	64199296	100	+	.	Parent=FBgn0037185.1.mrna1;Target=FBgn0037185.1 997 1158 +
Chr1	stalkie_big_nohaplotig	exon	64201656	64201769	100	+	.	Parent=FBgn0037185.1.mrna1;Target=FBgn0037185.1 1159 1272 +
Chr1	stalkie_big_nohaplotig	CDS	64179062	64179933	.	+	0	Parent=FBgn0037185.1.mrna1;Target=FBgn0037185.1 1 872 +
Chr1	stalkie_big_nohaplotig	CDS	64192122	64192245	.	+	1	Parent=FBgn0037185.1.mrna1;Target=FBgn0037185.1 873 996 +
Chr1	stalkie_big_nohaplotig	CDS	64199135	64199296	.	+	0	Parent=FBgn0037185.1.mrna1;Target=FBgn0037185.1 997 1158 +
Chr1	stalkie_big_nohaplotig	CDS	64201656	64201769	.	+	0	Parent=FBgn0037185.1.mrna1;Target=FBgn0037185.1 1159 1272 +
Chr1	gffcl	locus	64203290	64204008	.	-	.	ID=RLOC_00008523;geneIDs=comp156167_c0_seq1.path1;transcripts=comp156167_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64203290	64204008	.	-	.	ID=comp156167_c0_seq1.mrna1;geneID=comp156167_c0_seq1.path1;Name=comp156167_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.5;matches=694;mismatches=15;indels=10;unknowns=0;Target=comp156167_c0_seq1 709 1 .;CDS_Target=comp156167_c0_seq1 165 1 .;locus=RLOC_00008523
Chr1	stalkie_big_nohaplotig	exon	64203290	64204008	96	-	.	Parent=comp156167_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	64203844	64204008	.	-	0	Parent=comp156167_c0_seq1.mrna1
Chr1	gffcl	locus	64205071	64211772	.	-	.	ID=RLOC_00008524;geneIDs=FBgn0037186.1.path1;transcripts=FBgn0037186.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64205071	64211772	.	-	.	ID=FBgn0037186.1.mrna1;geneID=FBgn0037186.1.path1;Name=FBgn0037186.1;Dir=sensecoverage=100.0;identity=99.5;matches=1565;mismatches=7;indels=1;unknowns=0;locus=RLOC_00008524
Chr1	stalkie_big_nohaplotig	exon	64205071	64205172	100	-	.	Parent=FBgn0037186.1.mrna1;Target=FBgn0037186.1 1471 1572 +
Chr1	stalkie_big_nohaplotig	exon	64205307	64205689	99	-	.	Parent=FBgn0037186.1.mrna1;Target=FBgn0037186.1 1088 1470 +
Chr1	stalkie_big_nohaplotig	exon	64205768	64206465	99	-	.	Parent=FBgn0037186.1.mrna1;Target=FBgn0037186.1 390 1087 +
Chr1	stalkie_big_nohaplotig	exon	64206526	64206847	99	-	.	Parent=FBgn0037186.1.mrna1;Target=FBgn0037186.1 68 389 +
Chr1	stalkie_big_nohaplotig	exon	64211705	64211772	98	-	.	Parent=FBgn0037186.1.mrna1;Target=FBgn0037186.1 1 67 +
Chr1	stalkie_big_nohaplotig	CDS	64206665	64206847	.	-	0	Parent=FBgn0037186.1.mrna1;Target=FBgn0037186.1 68 250 +
Chr1	stalkie_big_nohaplotig	CDS	64211705	64211725	.	-	0	Parent=FBgn0037186.1.mrna1;Target=FBgn0037186.1 47 67 +
Chr1	gffcl	locus	64215760	64218465	.	-	.	ID=RLOC_00008525;geneIDs=FBgn0010830.1.path1;transcripts=FBgn0010830.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64215760	64218465	.	-	.	ID=FBgn0010830.1.mrna1;geneID=FBgn0010830.1.path1;Name=FBgn0010830.1;Dir=sensecoverage=100.0;identity=99.7;matches=2039;mismatches=7;indels=0;unknowns=0;locus=RLOC_00008525
Chr1	stalkie_big_nohaplotig	exon	64215760	64215892	100	-	.	Parent=FBgn0010830.1.mrna1;Target=FBgn0010830.1 1914 2046 +
Chr1	stalkie_big_nohaplotig	exon	64216380	64216567	99	-	.	Parent=FBgn0010830.1.mrna1;Target=FBgn0010830.1 1726 1913 +
Chr1	stalkie_big_nohaplotig	exon	64216631	64217550	99	-	.	Parent=FBgn0010830.1.mrna1;Target=FBgn0010830.1 806 1725 +
Chr1	stalkie_big_nohaplotig	exon	64217605	64218102	99	-	.	Parent=FBgn0010830.1.mrna1;Target=FBgn0010830.1 308 805 +
Chr1	stalkie_big_nohaplotig	exon	64218159	64218465	99	-	.	Parent=FBgn0010830.1.mrna1;Target=FBgn0010830.1 1 307 +
Chr1	stalkie_big_nohaplotig	CDS	64215760	64215892	.	-	1	Parent=FBgn0010830.1.mrna1;Target=FBgn0010830.1 1914 2046 +
Chr1	stalkie_big_nohaplotig	CDS	64216380	64216567	.	-	0	Parent=FBgn0010830.1.mrna1;Target=FBgn0010830.1 1726 1913 +
Chr1	stalkie_big_nohaplotig	CDS	64216631	64217550	.	-	2	Parent=FBgn0010830.1.mrna1;Target=FBgn0010830.1 806 1725 +
Chr1	stalkie_big_nohaplotig	CDS	64217605	64218102	.	-	2	Parent=FBgn0010830.1.mrna1;Target=FBgn0010830.1 308 805 +
Chr1	stalkie_big_nohaplotig	CDS	64218159	64218465	.	-	0	Parent=FBgn0010830.1.mrna1;Target=FBgn0010830.1 1 307 +
Chr1	gffcl	locus	64225210	64228591	.	+	.	ID=RLOC_00008526;geneIDs=FBgn0037188.1.path1;transcripts=FBgn0037188.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64225210	64228591	.	+	.	ID=FBgn0037188.1.mrna1;geneID=FBgn0037188.1.path1;Name=FBgn0037188.1;Dir=sensecoverage=100.0;identity=99.9;matches=2019;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008526
Chr1	stalkie_big_nohaplotig	exon	64225210	64226607	99	+	.	Parent=FBgn0037188.1.mrna1;Target=FBgn0037188.1 1 1398 +
Chr1	stalkie_big_nohaplotig	exon	64227841	64227984	99	+	.	Parent=FBgn0037188.1.mrna1;Target=FBgn0037188.1 1399 1542 +
Chr1	stalkie_big_nohaplotig	exon	64228046	64228248	100	+	.	Parent=FBgn0037188.1.mrna1;Target=FBgn0037188.1 1543 1745 +
Chr1	stalkie_big_nohaplotig	exon	64228315	64228591	100	+	.	Parent=FBgn0037188.1.mrna1;Target=FBgn0037188.1 1746 2022 +
Chr1	stalkie_big_nohaplotig	CDS	64225210	64226607	.	+	0	Parent=FBgn0037188.1.mrna1;Target=FBgn0037188.1 1 1398 +
Chr1	stalkie_big_nohaplotig	CDS	64227841	64227984	.	+	0	Parent=FBgn0037188.1.mrna1;Target=FBgn0037188.1 1399 1542 +
Chr1	stalkie_big_nohaplotig	CDS	64228046	64228248	.	+	0	Parent=FBgn0037188.1.mrna1;Target=FBgn0037188.1 1543 1745 +
Chr1	stalkie_big_nohaplotig	CDS	64228315	64228591	.	+	1	Parent=FBgn0037188.1.mrna1;Target=FBgn0037188.1 1746 2022 +
Chr1	gffcl	locus	64233740	64235239	.	-	.	ID=RLOC_00008527;geneIDs=comp158368_c0_seq1.path1;transcripts=comp158368_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64233740	64235239	.	-	.	ID=comp158368_c0_seq1.mrna1;geneID=comp158368_c0_seq1.path1;Name=comp158368_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.3;matches=1490;mismatches=10;indels=0;unknowns=0;Target=comp158368_c0_seq1 1524 25 .;CDS_Target=comp158368_c0_seq1 759 526 .;locus=RLOC_00008527
Chr1	stalkie_big_nohaplotig	exon	64233740	64235239	99	-	.	Parent=comp158368_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	64234505	64234738	.	-	0	Parent=comp158368_c0_seq1.mrna1
Chr1	gffcl	locus	64285903	64286294	.	+	.	ID=RLOC_00008528;geneIDs=comp149409_c0_seq1.path1;transcripts=comp149409_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64285903	64286294	.	+	.	ID=comp149409_c0_seq1.mrna1;geneID=comp149409_c0_seq1.path1;Name=comp149409_c0_seq1;Dir=indeterminatecoverage=94.0;identity=96.9;matches=380;mismatches=12;indels=0;unknowns=0;Target=comp149409_c0_seq1 394 3 .;CDS_Target=comp149409_c0_seq1 393 286 .;locus=RLOC_00008528
Chr1	stalkie_big_nohaplotig	exon	64285903	64286294	96	+	.	Parent=comp149409_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	64286186	64286293	.	+	0	Parent=comp149409_c0_seq1.mrna1
Chr1	gffcl	locus	64287746	64417642	.	+	.	ID=RLOC_00008529;geneIDs=FBgn0052451.1.path1,comp113789_c0_seq1.path1,comp136938_c1_seq1.path1,comp163614_c1_seq1.path1;transcripts=FBgn0052451.1.mrna1,comp163614_c1_seq1.mrna1,comp136938_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64287746	64362149	.	+	.	ID=FBgn0052451.1.mrna1;geneID=FBgn0052451.1.path1;Name=FBgn0052451.1;Dir=sensecoverage=100.0;identity=99.8;matches=3045;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008529
Chr1	stalkie_big_nohaplotig	exon	64287746	64288069	100	+	.	Parent=FBgn0052451.1.mrna1;Target=FBgn0052451.1 1 324 +
Chr1	stalkie_big_nohaplotig	exon	64341779	64343492	99	+	.	Parent=FBgn0052451.1.mrna1;Target=FBgn0052451.1 325 2038 +
Chr1	stalkie_big_nohaplotig	exon	64361070	64361385	100	+	.	Parent=FBgn0052451.1.mrna1;Target=FBgn0052451.1 2039 2354 +
Chr1	stalkie_big_nohaplotig	exon	64361453	64362149	99	+	.	Parent=FBgn0052451.1.mrna1;Target=FBgn0052451.1 2355 3051 +
Chr1	stalkie_big_nohaplotig	CDS	64287746	64288069	.	+	0	Parent=FBgn0052451.1.mrna1;Target=FBgn0052451.1 1 324 +
Chr1	stalkie_big_nohaplotig	CDS	64341779	64343492	.	+	0	Parent=FBgn0052451.1.mrna1;Target=FBgn0052451.1 325 2038 +
Chr1	stalkie_big_nohaplotig	CDS	64361070	64361385	.	+	2	Parent=FBgn0052451.1.mrna1;Target=FBgn0052451.1 2039 2354 +
Chr1	stalkie_big_nohaplotig	CDS	64361453	64362149	.	+	1	Parent=FBgn0052451.1.mrna1;Target=FBgn0052451.1 2355 3051 +
Chr1	stalkie_big_nohaplotig	mRNA	64341779	64417642	.	+	.	ID=comp163614_c1_seq1.mrna1;geneID=comp163614_c1_seq1.path1;Name=comp163614_c1_seq1;Dir=antisensecoverage=85.5;identity=97.3;matches=4438;mismatches=37;indels=84;unknowns=0;locus=RLOC_00008529
Chr1	stalkie_big_nohaplotig	exon	64341779	64343492	99	+	.	Parent=comp163614_c1_seq1.mrna1;Target=comp163614_c1_seq1 4405 6118 -
Chr1	stalkie_big_nohaplotig	exon	64361070	64361385	100	+	.	Parent=comp163614_c1_seq1.mrna1;Target=comp163614_c1_seq1 4089 4404 -
Chr1	stalkie_big_nohaplotig	exon	64361453	64362435	99	+	.	Parent=comp163614_c1_seq1.mrna1;Target=comp163614_c1_seq1 3105 4088 -
Chr1	stalkie_big_nohaplotig	exon	64363276	64364617	94	+	.	Parent=comp163614_c1_seq1.mrna1;Target=comp163614_c1_seq1 1783 3104 -
Chr1	stalkie_big_nohaplotig	exon	64374112	64374124	84	+	.	Parent=comp163614_c1_seq1.mrna1;Target=comp163614_c1_seq1 1770 1782 -
Chr1	stalkie_big_nohaplotig	exon	64381522	64381524	100	+	.	Parent=comp163614_c1_seq1.mrna1;Target=comp163614_c1_seq1 1767 1769 -
Chr1	stalkie_big_nohaplotig	exon	64382090	64382094	100	+	.	Parent=comp163614_c1_seq1.mrna1;Target=comp163614_c1_seq1 1762 1766 -
Chr1	stalkie_big_nohaplotig	exon	64387781	64387786	100	+	.	Parent=comp163614_c1_seq1.mrna1;Target=comp163614_c1_seq1 1741 1746 -
Chr1	stalkie_big_nohaplotig	exon	64387964	64387973	100	+	.	Parent=comp163614_c1_seq1.mrna1;Target=comp163614_c1_seq1 1731 1740 -
Chr1	stalkie_big_nohaplotig	exon	64390594	64390611	64	+	.	Parent=comp163614_c1_seq1.mrna1;Target=comp163614_c1_seq1 1706 1730 -
Chr1	stalkie_big_nohaplotig	exon	64402431	64402448	77	+	.	Parent=comp163614_c1_seq1.mrna1;Target=comp163614_c1_seq1 1361 1378 -
Chr1	stalkie_big_nohaplotig	exon	64402930	64402938	100	+	.	Parent=comp163614_c1_seq1.mrna1;Target=comp163614_c1_seq1 1305 1313 -
Chr1	stalkie_big_nohaplotig	exon	64403001	64403009	100	+	.	Parent=comp163614_c1_seq1.mrna1;Target=comp163614_c1_seq1 1210 1218 -
Chr1	stalkie_big_nohaplotig	exon	64404509	64404516	100	+	.	Parent=comp163614_c1_seq1.mrna1;Target=comp163614_c1_seq1 1196 1203 -
Chr1	stalkie_big_nohaplotig	exon	64404524	64404539	87	+	.	Parent=comp163614_c1_seq1.mrna1;Target=comp163614_c1_seq1 1126 1141 -
Chr1	stalkie_big_nohaplotig	exon	64408301	64408334	54	+	.	Parent=comp163614_c1_seq1.mrna1;Target=comp163614_c1_seq1 1084 1125 -
Chr1	stalkie_big_nohaplotig	exon	64416504	64416508	100	+	.	Parent=comp163614_c1_seq1.mrna1;Target=comp163614_c1_seq1 500 504 -
Chr1	stalkie_big_nohaplotig	exon	64417635	64417642	100	+	.	Parent=comp163614_c1_seq1.mrna1;Target=comp163614_c1_seq1 456 463 -
Chr1	stalkie_big_nohaplotig	CDS	64341779	64343492	.	+	0	Parent=comp163614_c1_seq1.mrna1;Target=comp163614_c1_seq1 4405 6118 .
Chr1	stalkie_big_nohaplotig	CDS	64361070	64361385	.	+	2	Parent=comp163614_c1_seq1.mrna1;Target=comp163614_c1_seq1 4089 4404 .
Chr1	stalkie_big_nohaplotig	CDS	64361453	64362152	.	+	1	Parent=comp163614_c1_seq1.mrna1;Target=comp163614_c1_seq1 3389 4088 .
Chr1	stalkie_big_nohaplotig	mRNA	64382365	64382831	.	+	.	ID=comp136938_c1_seq1.mrna1;geneID=comp136938_c1_seq1.path1;Name=comp136938_c1_seq1;Dir=indeterminatecoverage=96.6;identity=98.3;matches=459;mismatches=1;indels=7;unknowns=0;Target=comp136938_c1_seq1 460 1 .;CDS_Target=comp136938_c1_seq1 31 2 .;locus=RLOC_00008529
Chr1	stalkie_big_nohaplotig	exon	64382365	64382831	98	+	.	Parent=comp136938_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	64382366	64382402	.	+	0	Parent=comp136938_c1_seq1.mrna1
Chr1	gffcl	locus	64325352	64325644	.	-	.	ID=RLOC_00008530;geneIDs=comp50749_c0_seq1.path1;transcripts=comp50749_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64325352	64325644	.	-	.	ID=comp50749_c0_seq1.mrna1;geneID=comp50749_c0_seq1.path1;Name=comp50749_c0_seq1;Dir=indeterminatecoverage=92.7;identity=99.3;matches=291;mismatches=2;indels=0;unknowns=0;Target=comp50749_c0_seq1 316 24 .;CDS_Target=comp50749_c0_seq1 252 97 .;locus=RLOC_00008530
Chr1	stalkie_big_nohaplotig	exon	64325352	64325644	99	-	.	Parent=comp50749_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	64325416	64325571	.	-	0	Parent=comp50749_c0_seq1.mrna1
Chr1	gffcl	locus	64325987	64327005	.	-	.	ID=RLOC_00008531;geneIDs=comp159933_c1_seq1.path1;transcripts=comp159933_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64325987	64327005	.	-	.	ID=comp159933_c1_seq1.mrna1;geneID=comp159933_c1_seq1.path1;Name=comp159933_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1015;mismatches=3;indels=2;unknowns=0;Target=comp159933_c1_seq1 1019 1 .;CDS_Target=comp159933_c1_seq1 105 1 .;locus=RLOC_00008531
Chr1	stalkie_big_nohaplotig	exon	64325987	64327005	99	-	.	Parent=comp159933_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	64326901	64327005	.	-	0	Parent=comp159933_c1_seq1.mrna1
Chr1	gffcl	locus	64374542	64375046	.	-	.	ID=RLOC_00008532;geneIDs=comp387954_c0_seq1.path1;transcripts=comp387954_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64374542	64375046	.	-	.	ID=comp387954_c0_seq1.mrna1;geneID=comp387954_c0_seq1.path1;Name=comp387954_c0_seq1;Dir=indeterminatecoverage=96.0;identity=99.8;matches=505;mismatches=0;indels=1;unknowns=0;Target=comp387954_c0_seq1 527 22 .;CDS_Target=comp387954_c0_seq1 93 22 .;locus=RLOC_00008532
Chr1	stalkie_big_nohaplotig	exon	64374542	64375046	99	-	.	Parent=comp387954_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	64374975	64375046	.	-	0	Parent=comp387954_c0_seq1.mrna1
Chr1	gffcl	locus	64377172	64377384	.	-	.	ID=RLOC_00008533;geneIDs=comp95320_c0_seq1.path1;transcripts=comp95320_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64377172	64377384	.	-	.	ID=comp95320_c0_seq1.mrna1;geneID=comp95320_c0_seq1.path1;Name=comp95320_c0_seq1;Dir=indeterminatecoverage=92.2;identity=100.0;matches=213;mismatches=0;indels=0;unknowns=0;Target=comp95320_c0_seq1 231 19 .;CDS_Target=comp95320_c0_seq1 61 20 .;locus=RLOC_00008533
Chr1	stalkie_big_nohaplotig	exon	64377172	64377384	100	-	.	Parent=comp95320_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	64377342	64377383	.	-	0	Parent=comp95320_c0_seq1.mrna1
Chr1	gffcl	locus	64380036	64380795	.	-	.	ID=RLOC_00008534;geneIDs=comp146590_c0_seq1.path1;transcripts=comp146590_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64380036	64380795	.	-	.	ID=comp146590_c0_seq1.mrna1;geneID=comp146590_c0_seq1.path1;Name=comp146590_c0_seq1;Dir=indeterminatecoverage=97.3;identity=99.5;matches=756;mismatches=4;indels=0;unknowns=0;Target=comp146590_c0_seq1 775 16 .;CDS_Target=comp146590_c0_seq1 710 639 .;locus=RLOC_00008534
Chr1	stalkie_big_nohaplotig	exon	64380036	64380795	99	-	.	Parent=comp146590_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	64380101	64380172	.	-	0	Parent=comp146590_c0_seq1.mrna1
Chr1	gffcl	locus	64384675	64390405	.	-	.	ID=RLOC_00008535;geneIDs=FBgn0027339.1.path1;transcripts=FBgn0027339.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64384675	64390405	.	-	.	ID=FBgn0027339.1.mrna1;geneID=FBgn0027339.1.path1;Name=FBgn0027339.1;Dir=sensecoverage=100.0;identity=99.9;matches=2545;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008535
Chr1	stalkie_big_nohaplotig	exon	64384675	64385163	100	-	.	Parent=FBgn0027339.1.mrna1;Target=FBgn0027339.1 2059 2547 +
Chr1	stalkie_big_nohaplotig	exon	64385309	64385413	100	-	.	Parent=FBgn0027339.1.mrna1;Target=FBgn0027339.1 1954 2058 +
Chr1	stalkie_big_nohaplotig	exon	64385475	64385761	99	-	.	Parent=FBgn0027339.1.mrna1;Target=FBgn0027339.1 1667 1953 +
Chr1	stalkie_big_nohaplotig	exon	64385842	64386033	100	-	.	Parent=FBgn0027339.1.mrna1;Target=FBgn0027339.1 1475 1666 +
Chr1	stalkie_big_nohaplotig	exon	64388060	64388317	100	-	.	Parent=FBgn0027339.1.mrna1;Target=FBgn0027339.1 1217 1474 +
Chr1	stalkie_big_nohaplotig	exon	64389130	64389883	99	-	.	Parent=FBgn0027339.1.mrna1;Target=FBgn0027339.1 463 1216 +
Chr1	stalkie_big_nohaplotig	exon	64389944	64390405	100	-	.	Parent=FBgn0027339.1.mrna1;Target=FBgn0027339.1 1 462 +
Chr1	stalkie_big_nohaplotig	CDS	64384675	64385163	.	-	0	Parent=FBgn0027339.1.mrna1;Target=FBgn0027339.1 2059 2547 +
Chr1	stalkie_big_nohaplotig	CDS	64385309	64385413	.	-	0	Parent=FBgn0027339.1.mrna1;Target=FBgn0027339.1 1954 2058 +
Chr1	stalkie_big_nohaplotig	CDS	64385475	64385761	.	-	2	Parent=FBgn0027339.1.mrna1;Target=FBgn0027339.1 1667 1953 +
Chr1	stalkie_big_nohaplotig	CDS	64385842	64386033	.	-	2	Parent=FBgn0027339.1.mrna1;Target=FBgn0027339.1 1475 1666 +
Chr1	stalkie_big_nohaplotig	CDS	64388060	64388317	.	-	2	Parent=FBgn0027339.1.mrna1;Target=FBgn0027339.1 1217 1474 +
Chr1	stalkie_big_nohaplotig	CDS	64389130	64389883	.	-	0	Parent=FBgn0027339.1.mrna1;Target=FBgn0027339.1 463 1216 +
Chr1	stalkie_big_nohaplotig	CDS	64389944	64390405	.	-	0	Parent=FBgn0027339.1.mrna1;Target=FBgn0027339.1 1 462 +
Chr1	gffcl	locus	64400493	64401101	.	-	.	ID=RLOC_00008536;geneIDs=comp117908_c1_seq1.path1;transcripts=comp117908_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64400493	64401101	.	-	.	ID=comp117908_c1_seq1.mrna1;geneID=comp117908_c1_seq1.path1;Name=comp117908_c1_seq1;Dir=indeterminatecoverage=94.6;identity=99.2;matches=604;mismatches=5;indels=0;unknowns=0;Target=comp117908_c1_seq1 644 36 .;CDS_Target=comp117908_c1_seq1 281 210 .;locus=RLOC_00008536
Chr1	stalkie_big_nohaplotig	exon	64400493	64401101	99	-	.	Parent=comp117908_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	64400856	64400927	.	-	0	Parent=comp117908_c1_seq1.mrna1
Chr1	gffcl	locus	64422204	64431390	.	+	.	ID=RLOC_00008537;geneIDs=comp135417_c0_seq1.path1;transcripts=comp135417_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64422204	64431390	.	+	.	ID=comp135417_c0_seq1.mrna1;geneID=comp135417_c0_seq1.path1;Name=comp135417_c0_seq1;Dir=antisensecoverage=86.0;identity=93.5;matches=748;mismatches=12;indels=40;unknowns=0;Target=comp135417_c0_seq1 682 708 .;locus=RLOC_00008537
Chr1	stalkie_big_nohaplotig	exon	64422204	64422357	75	+	.	Parent=comp135417_c0_seq1.mrna1;Target=comp135417_c0_seq1 768 886 -
Chr1	stalkie_big_nohaplotig	exon	64430747	64431390	97	+	.	Parent=comp135417_c0_seq1.mrna1;Target=comp135417_c0_seq1 125 767 -
Chr1	stalkie_big_nohaplotig	CDS	64430804	64430831	.	+	0	Parent=comp135417_c0_seq1.mrna1
Chr1	gffcl	locus	64511398	64513587	.	-	.	ID=RLOC_00008539;geneIDs=FBgn0030655.1.path1;transcripts=FBgn0030655.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64511398	64513587	.	-	.	ID=FBgn0030655.1.mrna1;geneID=FBgn0030655.1.path1;Name=FBgn0030655.1;Dir=sensecoverage=100.0;identity=99.9;matches=1991;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008539
Chr1	stalkie_big_nohaplotig	exon	64511398	64511529	100	-	.	Parent=FBgn0030655.1.mrna1;Target=FBgn0030655.1 1861 1992 +
Chr1	stalkie_big_nohaplotig	exon	64511577	64512236	100	-	.	Parent=FBgn0030655.1.mrna1;Target=FBgn0030655.1 1201 1860 +
Chr1	stalkie_big_nohaplotig	exon	64512308	64513408	99	-	.	Parent=FBgn0030655.1.mrna1;Target=FBgn0030655.1 100 1200 +
Chr1	stalkie_big_nohaplotig	exon	64513489	64513587	100	-	.	Parent=FBgn0030655.1.mrna1;Target=FBgn0030655.1 1 99 +
Chr1	stalkie_big_nohaplotig	CDS	64511398	64511529	.	-	0	Parent=FBgn0030655.1.mrna1;Target=FBgn0030655.1 1861 1992 +
Chr1	stalkie_big_nohaplotig	CDS	64511577	64512236	.	-	0	Parent=FBgn0030655.1.mrna1;Target=FBgn0030655.1 1201 1860 +
Chr1	stalkie_big_nohaplotig	CDS	64512308	64513408	.	-	0	Parent=FBgn0030655.1.mrna1;Target=FBgn0030655.1 100 1200 +
Chr1	stalkie_big_nohaplotig	CDS	64513489	64513587	.	-	0	Parent=FBgn0030655.1.mrna1;Target=FBgn0030655.1 1 99 +
Chr1	gffcl	locus	64557318	64558008	.	+	.	ID=RLOC_00008540;geneIDs=comp156591_c0_seq1.path7;transcripts=comp156591_c0_seq1.mrna7
Chr1	stalkie_big_nohaplotig	mRNA	64557318	64558008	.	+	.	ID=comp156591_c0_seq1.mrna7;geneID=comp156591_c0_seq1.path7;Name=comp156591_c0_seq1;Dir=indeterminatecoverage=89.4;identity=97.7;matches=682;mismatches=8;indels=8;unknowns=0;Target=comp156591_c0_seq1 780 84 .;CDS_Target=comp156591_c0_seq1 702 514 .;locus=RLOC_00008540
Chr1	stalkie_big_nohaplotig	exon	64557318	64558008	97	+	.	Parent=comp156591_c0_seq1.mrna7
Chr1	stalkie_big_nohaplotig	CDS	64557743	64557930	.	+	0	Parent=comp156591_c0_seq1.mrna7
Chr1	gffcl	locus	64682069	64683165	.	+	.	ID=RLOC_00008541;geneIDs=Dv_FBgn0198607.1.path1;transcripts=Dv_FBgn0198607.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64682069	64683165	.	+	.	ID=Dv_FBgn0198607.1.mrna1;geneID=Dv_FBgn0198607.1.path1;Name=Dv_FBgn0198607.1;Dir=sensecoverage=100.0;identity=99.9;matches=878;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008541
Chr1	stalkie_big_nohaplotig	exon	64682069	64682167	100	+	.	Parent=Dv_FBgn0198607.1.mrna1;Target=Dv_FBgn0198607.1 1 99 +
Chr1	stalkie_big_nohaplotig	exon	64682304	64682399	100	+	.	Parent=Dv_FBgn0198607.1.mrna1;Target=Dv_FBgn0198607.1 100 195 +
Chr1	stalkie_big_nohaplotig	exon	64682482	64683165	99	+	.	Parent=Dv_FBgn0198607.1.mrna1;Target=Dv_FBgn0198607.1 196 879 +
Chr1	stalkie_big_nohaplotig	CDS	64682069	64682167	.	+	0	Parent=Dv_FBgn0198607.1.mrna1;Target=Dv_FBgn0198607.1 1 99 +
Chr1	stalkie_big_nohaplotig	CDS	64682304	64682399	.	+	0	Parent=Dv_FBgn0198607.1.mrna1;Target=Dv_FBgn0198607.1 100 195 +
Chr1	stalkie_big_nohaplotig	CDS	64682482	64683165	.	+	0	Parent=Dv_FBgn0198607.1.mrna1;Target=Dv_FBgn0198607.1 196 879 +
Chr1	gffcl	locus	64729473	64775034	.	.	.	ID=RLOC_00008543;geneIDs=CPIJ017423.1.path3,comp163228_c0_seq1.path1;transcripts=comp163228_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64729473	64775034	.	-	.	ID=comp163228_c0_seq1.mrna1;geneID=comp163228_c0_seq1.path1;Name=comp163228_c0_seq1;Dir=indeterminatecoverage=96.9;identity=98.5;matches=3385;mismatches=18;indels=32;unknowns=0;Target=comp163228_c0_seq1 496 275 .;locus=RLOC_00008543
Chr1	stalkie_big_nohaplotig	exon	64729473	64732841	98	-	.	Parent=comp163228_c0_seq1.mrna1;Target=comp163228_c0_seq1 3544 160 .
Chr1	stalkie_big_nohaplotig	exon	64739487	64739488	100	-	.	Parent=comp163228_c0_seq1.mrna1;Target=comp163228_c0_seq1 159 158 .
Chr1	stalkie_big_nohaplotig	exon	64740871	64740881	100	-	.	Parent=comp163228_c0_seq1.mrna1;Target=comp163228_c0_seq1 157 147 .
Chr1	stalkie_big_nohaplotig	exon	64743059	64743060	100	-	.	Parent=comp163228_c0_seq1.mrna1;Target=comp163228_c0_seq1 146 145 .
Chr1	stalkie_big_nohaplotig	exon	64775014	64775034	51	-	.	Parent=comp163228_c0_seq1.mrna1;Target=comp163228_c0_seq1 144 112 .
Chr1	stalkie_big_nohaplotig	CDS	64732505	64732726	.	-	0	Parent=comp163228_c0_seq1.mrna1
Chr1	gffcl	locus	64747929	64748661	.	+	.	ID=RLOC_00008544;geneIDs=comp154824_c1_seq1.path2;transcripts=comp154824_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	64747929	64748661	.	+	.	ID=comp154824_c1_seq1.mrna2;geneID=comp154824_c1_seq1.path2;Name=comp154824_c1_seq1;Dir=indeterminatecoverage=100.0;identity=92.0;matches=676;mismatches=10;indels=49;unknowns=0;Target=comp154824_c1_seq1 688 1 .;CDS_Target=comp154824_c1_seq1 311 240 .;locus=RLOC_00008544
Chr1	stalkie_big_nohaplotig	exon	64747929	64748661	91	+	.	Parent=comp154824_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	64748166	64748237	.	+	0	Parent=comp154824_c1_seq1.mrna2
Chr1	gffcl	locus	64752013	64753525	.	+	.	ID=RLOC_00008545;geneIDs=FBgn0000261.1.path2;transcripts=FBgn0000261.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	64752013	64753525	.	+	.	ID=FBgn0000261.1.mrna2;geneID=FBgn0000261.1.path2;Name=FBgn0000261.1;Dir=sensecoverage=95.3;identity=99.9;matches=1460;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008545
Chr1	stalkie_big_nohaplotig	exon	64752013	64752534	99	+	.	Parent=FBgn0000261.1.mrna2;Target=FBgn0000261.1 73 594 +
Chr1	stalkie_big_nohaplotig	exon	64752587	64753525	100	+	.	Parent=FBgn0000261.1.mrna2;Target=FBgn0000261.1 595 1533 +
Chr1	stalkie_big_nohaplotig	CDS	64752013	64752534	.	+	0	Parent=FBgn0000261.1.mrna2;Target=FBgn0000261.1 73 594 +
Chr1	stalkie_big_nohaplotig	CDS	64752587	64753525	.	+	0	Parent=FBgn0000261.1.mrna2;Target=FBgn0000261.1 595 1533 +
Chr1	gffcl	locus	64753704	64754432	.	+	.	ID=RLOC_00008546;geneIDs=comp153244_c0_seq1.path1;transcripts=comp153244_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64753704	64754432	.	+	.	ID=comp153244_c0_seq1.mrna1;geneID=comp153244_c0_seq1.path1;Name=comp153244_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=725;mismatches=4;indels=0;unknowns=0;Target=comp153244_c0_seq1 729 1 .;CDS_Target=comp153244_c0_seq1 269 159 .;locus=RLOC_00008546
Chr1	stalkie_big_nohaplotig	exon	64753704	64754432	99	+	.	Parent=comp153244_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	64753862	64753972	.	+	0	Parent=comp153244_c0_seq1.mrna1
Chr1	gffcl	locus	64758690	64760292	.	-	.	ID=RLOC_00008547;geneIDs=comp160829_c4_seq1.path1;transcripts=comp160829_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64758690	64760292	.	-	.	ID=comp160829_c4_seq1.mrna1;geneID=comp160829_c4_seq1.path1;Name=comp160829_c4_seq1;Dir=indeterminatecoverage=74.3;identity=99.1;matches=1589;mismatches=14;indels=0;unknowns=0;Target=comp160829_c4_seq1 2157 555 .;CDS_Target=comp160829_c4_seq1 1466 1257 .;locus=RLOC_00008547
Chr1	stalkie_big_nohaplotig	exon	64758690	64760292	99	-	.	Parent=comp160829_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	64759381	64759590	.	-	0	Parent=comp160829_c4_seq1.mrna1
Chr1	gffcl	locus	64761944	64784824	.	-	.	ID=RLOC_00008548;geneIDs=FBgn0036816.2.path1,comp116842_c0_seq1.path1,comp142994_c0_seq1.path1;transcripts=FBgn0036816.2.mrna1,comp142994_c0_seq1.mrna1,comp116842_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64761944	64784824	.	-	.	ID=FBgn0036816.2.mrna1;geneID=FBgn0036816.2.path1;Name=FBgn0036816.2;Dir=sensecoverage=100.0;identity=100.0;matches=1818;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008548
Chr1	stalkie_big_nohaplotig	exon	64761944	64762102	100	-	.	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 1660 1818 +
Chr1	stalkie_big_nohaplotig	exon	64762156	64762293	100	-	.	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 1522 1659 +
Chr1	stalkie_big_nohaplotig	exon	64762352	64762545	100	-	.	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 1328 1521 +
Chr1	stalkie_big_nohaplotig	exon	64766786	64766872	100	-	.	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 1241 1327 +
Chr1	stalkie_big_nohaplotig	exon	64766937	64767031	100	-	.	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 1146 1240 +
Chr1	stalkie_big_nohaplotig	exon	64767533	64767865	100	-	.	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 813 1145 +
Chr1	stalkie_big_nohaplotig	exon	64767925	64768050	100	-	.	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 687 812 +
Chr1	stalkie_big_nohaplotig	exon	64768101	64768168	100	-	.	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 619 686 +
Chr1	stalkie_big_nohaplotig	exon	64768228	64768342	100	-	.	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 504 618 +
Chr1	stalkie_big_nohaplotig	exon	64772842	64772990	100	-	.	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 355 503 +
Chr1	stalkie_big_nohaplotig	exon	64773050	64773085	100	-	.	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 319 354 +
Chr1	stalkie_big_nohaplotig	exon	64774237	64774317	100	-	.	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 238 318 +
Chr1	stalkie_big_nohaplotig	exon	64774383	64774518	100	-	.	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 102 237 +
Chr1	stalkie_big_nohaplotig	exon	64774571	64774601	100	-	.	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 71 101 +
Chr1	stalkie_big_nohaplotig	exon	64784755	64784824	100	-	.	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 1 70 +
Chr1	stalkie_big_nohaplotig	CDS	64761944	64762102	.	-	0	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 1660 1818 +
Chr1	stalkie_big_nohaplotig	CDS	64762156	64762293	.	-	0	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 1522 1659 +
Chr1	stalkie_big_nohaplotig	CDS	64762352	64762545	.	-	2	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 1328 1521 +
Chr1	stalkie_big_nohaplotig	CDS	64766786	64766872	.	-	2	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 1241 1327 +
Chr1	stalkie_big_nohaplotig	CDS	64766937	64767031	.	-	1	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 1146 1240 +
Chr1	stalkie_big_nohaplotig	CDS	64767533	64767865	.	-	1	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 813 1145 +
Chr1	stalkie_big_nohaplotig	CDS	64767925	64768050	.	-	1	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 687 812 +
Chr1	stalkie_big_nohaplotig	CDS	64768101	64768168	.	-	0	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 619 686 +
Chr1	stalkie_big_nohaplotig	CDS	64768228	64768342	.	-	1	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 504 618 +
Chr1	stalkie_big_nohaplotig	CDS	64772842	64772990	.	-	0	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 355 503 +
Chr1	stalkie_big_nohaplotig	CDS	64773050	64773085	.	-	0	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 319 354 +
Chr1	stalkie_big_nohaplotig	CDS	64774237	64774317	.	-	0	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 238 318 +
Chr1	stalkie_big_nohaplotig	CDS	64774383	64774518	.	-	1	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 102 237 +
Chr1	stalkie_big_nohaplotig	CDS	64774571	64774601	.	-	2	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 71 101 +
Chr1	stalkie_big_nohaplotig	CDS	64784755	64784824	.	-	0	Parent=FBgn0036816.2.mrna1;Target=FBgn0036816.2 1 70 +
Chr1	stalkie_big_nohaplotig	mRNA	64773050	64773792	.	-	.	ID=comp142994_c0_seq1.mrna1;geneID=comp142994_c0_seq1.path1;Name=comp142994_c0_seq1;Dir=sensecoverage=93.5;identity=99.0;matches=512;mismatches=5;indels=0;unknowns=0;Target=comp142994_c0_seq1 29 121 +;locus=RLOC_00008548
Chr1	stalkie_big_nohaplotig	exon	64773050	64773085	97	-	.	Parent=comp142994_c0_seq1.mrna1;Target=comp142994_c0_seq1 508 543 +
Chr1	stalkie_big_nohaplotig	exon	64773312	64773792	99	-	.	Parent=comp142994_c0_seq1.mrna1;Target=comp142994_c0_seq1 27 507 +
Chr1	stalkie_big_nohaplotig	CDS	64773698	64773790	.	-	0	Parent=comp142994_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64773857	64774260	.	-	.	ID=comp116842_c0_seq1.mrna1;geneID=comp116842_c0_seq1.path1;Name=comp116842_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=396;mismatches=3;indels=5;unknowns=0;Target=comp116842_c0_seq1 399 1 .;CDS_Target=comp116842_c0_seq1 129 1 .;locus=RLOC_00008548
Chr1	stalkie_big_nohaplotig	exon	64773857	64774260	98	-	.	Parent=comp116842_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	64774132	64774260	.	-	0	Parent=comp116842_c0_seq1.mrna1
Chr1	gffcl	locus	64762825	64763367	.	-	.	ID=RLOC_00008549;geneIDs=comp149906_c1_seq1.path1;transcripts=comp149906_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64762825	64763367	.	-	.	ID=comp149906_c1_seq1.mrna1;geneID=comp149906_c1_seq1.path1;Name=comp149906_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=540;mismatches=3;indels=0;unknowns=0;Target=comp149906_c1_seq1 543 1 .;CDS_Target=comp149906_c1_seq1 140 3 .;locus=RLOC_00008549
Chr1	stalkie_big_nohaplotig	exon	64762825	64763367	99	-	.	Parent=comp149906_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	64763228	64763365	.	-	0	Parent=comp149906_c1_seq1.mrna1
Chr1	gffcl	locus	64765383	64766268	.	-	.	ID=RLOC_00008550;geneIDs=comp153066_c0_seq1.path1;transcripts=comp153066_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64765383	64766268	.	-	.	ID=comp153066_c0_seq1.mrna1;geneID=comp153066_c0_seq1.path1;Name=comp153066_c0_seq1;Dir=indeterminatecoverage=97.9;identity=99.7;matches=883;mismatches=3;indels=0;unknowns=0;Target=comp153066_c0_seq1 905 20 .;CDS_Target=comp153066_c0_seq1 856 662 .;locus=RLOC_00008550
Chr1	stalkie_big_nohaplotig	exon	64765383	64766268	99	-	.	Parent=comp153066_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	64765432	64765626	.	-	0	Parent=comp153066_c0_seq1.mrna1
Chr1	gffcl	locus	64795778	64796048	.	-	.	ID=RLOC_00008551;geneIDs=comp58357_c0_seq1.path2;transcripts=comp58357_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	64795778	64796048	.	-	.	ID=comp58357_c0_seq1.mrna2;geneID=comp58357_c0_seq1.path2;Name=comp58357_c0_seq1;Dir=indeterminatecoverage=12.5;identity=99.6;matches=270;mismatches=1;indels=0;unknowns=0;Target=comp58357_c0_seq1 2145 1875 .;CDS_Target=comp58357_c0_seq1 2043 1876 .;locus=RLOC_00008551
Chr1	stalkie_big_nohaplotig	exon	64795778	64796048	99	-	.	Parent=comp58357_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	64795880	64796047	.	-	0	Parent=comp58357_c0_seq1.mrna2
Chr1	gffcl	locus	64834185	64834882	.	-	.	ID=RLOC_00008552;geneIDs=comp91543_c0_seq1.path1;transcripts=comp91543_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64834185	64834882	.	-	.	ID=comp91543_c0_seq1.mrna1;geneID=comp91543_c0_seq1.path1;Name=comp91543_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.7;matches=696;mismatches=2;indels=0;unknowns=0;Target=comp91543_c0_seq1 709 12 .;CDS_Target=comp91543_c0_seq1 631 551 .;locus=RLOC_00008552
Chr1	stalkie_big_nohaplotig	exon	64834185	64834882	99	-	.	Parent=comp91543_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	64834263	64834343	.	-	0	Parent=comp91543_c0_seq1.mrna1
Chr1	gffcl	locus	64877116	64880159	.	+	.	ID=RLOC_00008553;geneIDs=FBgn0035766.1.path1;transcripts=FBgn0035766.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64877116	64880159	.	+	.	ID=FBgn0035766.1.mrna1;geneID=FBgn0035766.1.path1;Name=FBgn0035766.1;Dir=sensecoverage=100.0;identity=99.6;matches=2834;mismatches=10;indels=0;unknowns=0;locus=RLOC_00008553
Chr1	stalkie_big_nohaplotig	exon	64877116	64878499	99	+	.	Parent=FBgn0035766.1.mrna1;Target=FBgn0035766.1 1 1384 +
Chr1	stalkie_big_nohaplotig	exon	64878584	64879719	99	+	.	Parent=FBgn0035766.1.mrna1;Target=FBgn0035766.1 1385 2520 +
Chr1	stalkie_big_nohaplotig	exon	64879779	64879903	100	+	.	Parent=FBgn0035766.1.mrna1;Target=FBgn0035766.1 2521 2645 +
Chr1	stalkie_big_nohaplotig	exon	64879961	64880159	100	+	.	Parent=FBgn0035766.1.mrna1;Target=FBgn0035766.1 2646 2844 +
Chr1	stalkie_big_nohaplotig	CDS	64877116	64878499	.	+	0	Parent=FBgn0035766.1.mrna1;Target=FBgn0035766.1 1 1384 +
Chr1	stalkie_big_nohaplotig	CDS	64878584	64879719	.	+	2	Parent=FBgn0035766.1.mrna1;Target=FBgn0035766.1 1385 2520 +
Chr1	stalkie_big_nohaplotig	CDS	64879779	64879903	.	+	0	Parent=FBgn0035766.1.mrna1;Target=FBgn0035766.1 2521 2645 +
Chr1	stalkie_big_nohaplotig	CDS	64879961	64880159	.	+	1	Parent=FBgn0035766.1.mrna1;Target=FBgn0035766.1 2646 2844 +
Chr1	gffcl	locus	64880847	64882266	.	-	.	ID=RLOC_00008554;geneIDs=FBgn0011640.1.path1;transcripts=FBgn0011640.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64880847	64882266	.	-	.	ID=FBgn0011640.1.mrna1;geneID=FBgn0011640.1.path1;Name=FBgn0011640.1;Dir=sensecoverage=100.0;identity=99.9;matches=1049;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008554
Chr1	stalkie_big_nohaplotig	exon	64880847	64880943	100	-	.	Parent=FBgn0011640.1.mrna1;Target=FBgn0011640.1 954 1050 +
Chr1	stalkie_big_nohaplotig	exon	64880998	64881233	99	-	.	Parent=FBgn0011640.1.mrna1;Target=FBgn0011640.1 718 953 +
Chr1	stalkie_big_nohaplotig	exon	64881550	64882266	100	-	.	Parent=FBgn0011640.1.mrna1;Target=FBgn0011640.1 1 717 +
Chr1	stalkie_big_nohaplotig	CDS	64880847	64880943	.	-	1	Parent=FBgn0011640.1.mrna1;Target=FBgn0011640.1 954 1050 +
Chr1	stalkie_big_nohaplotig	CDS	64880998	64881233	.	-	0	Parent=FBgn0011640.1.mrna1;Target=FBgn0011640.1 718 953 +
Chr1	stalkie_big_nohaplotig	CDS	64881550	64882266	.	-	0	Parent=FBgn0011640.1.mrna1;Target=FBgn0011640.1 1 717 +
Chr1	gffcl	locus	64891136	64893574	.	+	.	ID=RLOC_00008555;geneIDs=FBgn0036820.1.path1,comp151440_c2_seq1.path1;transcripts=FBgn0036820.1.mrna1,comp151440_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64891136	64893574	.	+	.	ID=FBgn0036820.1.mrna1;geneID=FBgn0036820.1.path1;Name=FBgn0036820.1;Dir=sensecoverage=100.0;identity=100.0;matches=366;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008555
Chr1	stalkie_big_nohaplotig	exon	64891136	64891303	100	+	.	Parent=FBgn0036820.1.mrna1;Target=FBgn0036820.1 1 168 +
Chr1	stalkie_big_nohaplotig	exon	64891357	64891461	100	+	.	Parent=FBgn0036820.1.mrna1;Target=FBgn0036820.1 169 273 +
Chr1	stalkie_big_nohaplotig	exon	64893482	64893574	100	+	.	Parent=FBgn0036820.1.mrna1;Target=FBgn0036820.1 274 366 +
Chr1	stalkie_big_nohaplotig	CDS	64891136	64891303	.	+	0	Parent=FBgn0036820.1.mrna1;Target=FBgn0036820.1 1 168 +
Chr1	stalkie_big_nohaplotig	CDS	64891357	64891461	.	+	0	Parent=FBgn0036820.1.mrna1;Target=FBgn0036820.1 169 273 +
Chr1	stalkie_big_nohaplotig	CDS	64893482	64893574	.	+	0	Parent=FBgn0036820.1.mrna1;Target=FBgn0036820.1 274 366 +
Chr1	stalkie_big_nohaplotig	mRNA	64892746	64893504	.	+	.	ID=comp151440_c2_seq1.mrna1;geneID=comp151440_c2_seq1.path1;Name=comp151440_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=755;mismatches=4;indels=0;unknowns=0;Target=comp151440_c2_seq1 759 1 .;CDS_Target=comp151440_c2_seq1 97 2 .;locus=RLOC_00008555
Chr1	stalkie_big_nohaplotig	exon	64892746	64893504	99	+	.	Parent=comp151440_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	64892747	64892842	.	+	0	Parent=comp151440_c2_seq1.mrna1
Chr1	gffcl	locus	64893715	64898414	.	-	.	ID=RLOC_00008556;geneIDs=FBgn0014075.1.path1;transcripts=FBgn0014075.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64893715	64898414	.	-	.	ID=FBgn0014075.1.mrna1;geneID=FBgn0014075.1.path1;Name=FBgn0014075.1;Dir=sensecoverage=100.0;identity=99.7;matches=4634;mismatches=13;indels=0;unknowns=0;locus=RLOC_00008556
Chr1	stalkie_big_nohaplotig	exon	64893715	64898099	99	-	.	Parent=FBgn0014075.1.mrna1;Target=FBgn0014075.1 263 4647 +
Chr1	stalkie_big_nohaplotig	exon	64898153	64898414	99	-	.	Parent=FBgn0014075.1.mrna1;Target=FBgn0014075.1 1 262 +
Chr1	stalkie_big_nohaplotig	CDS	64893715	64898099	.	-	2	Parent=FBgn0014075.1.mrna1;Target=FBgn0014075.1 263 4647 +
Chr1	stalkie_big_nohaplotig	CDS	64898153	64898414	.	-	0	Parent=FBgn0014075.1.mrna1;Target=FBgn0014075.1 1 262 +
Chr1	gffcl	locus	64904804	64910103	.	+	.	ID=RLOC_00008557;geneIDs=FBgn0025807.1.path1,comp153361_c0_seq1.path1;transcripts=FBgn0025807.1.mrna1,comp153361_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64904804	64910103	.	+	.	ID=FBgn0025807.1.mrna1;geneID=FBgn0025807.1.path1;Name=FBgn0025807.1;Dir=sensecoverage=100.0;identity=99.6;matches=1246;mismatches=5;indels=0;unknowns=0;locus=RLOC_00008557
Chr1	stalkie_big_nohaplotig	exon	64904804	64904837	100	+	.	Parent=FBgn0025807.1.mrna1;Target=FBgn0025807.1 1 34 +
Chr1	stalkie_big_nohaplotig	exon	64904891	64905117	99	+	.	Parent=FBgn0025807.1.mrna1;Target=FBgn0025807.1 35 261 +
Chr1	stalkie_big_nohaplotig	exon	64906157	64906308	99	+	.	Parent=FBgn0025807.1.mrna1;Target=FBgn0025807.1 262 413 +
Chr1	stalkie_big_nohaplotig	exon	64906362	64906523	100	+	.	Parent=FBgn0025807.1.mrna1;Target=FBgn0025807.1 414 575 +
Chr1	stalkie_big_nohaplotig	exon	64909371	64909505	100	+	.	Parent=FBgn0025807.1.mrna1;Target=FBgn0025807.1 576 710 +
Chr1	stalkie_big_nohaplotig	exon	64909563	64910103	99	+	.	Parent=FBgn0025807.1.mrna1;Target=FBgn0025807.1 711 1251 +
Chr1	stalkie_big_nohaplotig	CDS	64904804	64904837	.	+	0	Parent=FBgn0025807.1.mrna1;Target=FBgn0025807.1 1 34 +
Chr1	stalkie_big_nohaplotig	CDS	64904891	64905117	.	+	2	Parent=FBgn0025807.1.mrna1;Target=FBgn0025807.1 35 261 +
Chr1	stalkie_big_nohaplotig	CDS	64906157	64906308	.	+	0	Parent=FBgn0025807.1.mrna1;Target=FBgn0025807.1 262 413 +
Chr1	stalkie_big_nohaplotig	CDS	64906362	64906523	.	+	1	Parent=FBgn0025807.1.mrna1;Target=FBgn0025807.1 414 575 +
Chr1	stalkie_big_nohaplotig	CDS	64909371	64909505	.	+	1	Parent=FBgn0025807.1.mrna1;Target=FBgn0025807.1 576 710 +
Chr1	stalkie_big_nohaplotig	CDS	64909563	64910103	.	+	1	Parent=FBgn0025807.1.mrna1;Target=FBgn0025807.1 711 1251 +
Chr1	stalkie_big_nohaplotig	mRNA	64905095	64905925	.	+	.	ID=comp153361_c0_seq1.mrna1;geneID=comp153361_c0_seq1.path1;Name=comp153361_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=708;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008557
Chr1	stalkie_big_nohaplotig	exon	64905095	64905117	95	+	.	Parent=comp153361_c0_seq1.mrna1;Target=comp153361_c0_seq1 1 23 +
Chr1	stalkie_big_nohaplotig	exon	64905173	64905260	98	+	.	Parent=comp153361_c0_seq1.mrna1;Target=comp153361_c0_seq1 24 111 +
Chr1	stalkie_big_nohaplotig	exon	64905326	64905925	99	+	.	Parent=comp153361_c0_seq1.mrna1;Target=comp153361_c0_seq1 112 711 +
Chr1	stalkie_big_nohaplotig	CDS	64905208	64905260	.	+	0	Parent=comp153361_c0_seq1.mrna1;Target=comp153361_c0_seq1 59 111 +
Chr1	stalkie_big_nohaplotig	CDS	64905326	64905368	.	+	1	Parent=comp153361_c0_seq1.mrna1;Target=comp153361_c0_seq1 112 154 +
Chr1	gffcl	locus	64907369	64908204	.	-	.	ID=RLOC_00008558;geneIDs=comp147029_c0_seq1.path1;transcripts=comp147029_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64907369	64908204	.	-	.	ID=comp147029_c0_seq1.mrna1;geneID=comp147029_c0_seq1.path1;Name=comp147029_c0_seq1;Dir=indeterminatecoverage=94.5;identity=99.7;matches=777;mismatches=2;indels=0;unknowns=0;Target=comp147029_c0_seq1 630 520 .;locus=RLOC_00008558
Chr1	stalkie_big_nohaplotig	exon	64907369	64908064	99	-	.	Parent=comp147029_c0_seq1.mrna1;Target=comp147029_c0_seq1 779 84 .
Chr1	stalkie_big_nohaplotig	exon	64908122	64908204	100	-	.	Parent=comp147029_c0_seq1.mrna1;Target=comp147029_c0_seq1 83 1 .
Chr1	stalkie_big_nohaplotig	CDS	64907518	64907628	.	-	0	Parent=comp147029_c0_seq1.mrna1
Chr1	gffcl	locus	64910173	64910866	.	-	.	ID=RLOC_00008559;geneIDs=FBgn0085284.1.path1;transcripts=FBgn0085284.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64910173	64910866	.	-	.	ID=FBgn0085284.1.mrna1;geneID=FBgn0085284.1.path1;Name=FBgn0085284.1;Dir=sensecoverage=100.0;identity=100.0;matches=444;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008559
Chr1	stalkie_big_nohaplotig	exon	64910173	64910286	100	-	.	Parent=FBgn0085284.1.mrna1;Target=FBgn0085284.1 331 444 +
Chr1	stalkie_big_nohaplotig	exon	64910378	64910487	100	-	.	Parent=FBgn0085284.1.mrna1;Target=FBgn0085284.1 221 330 +
Chr1	stalkie_big_nohaplotig	exon	64910540	64910620	100	-	.	Parent=FBgn0085284.1.mrna1;Target=FBgn0085284.1 140 220 +
Chr1	stalkie_big_nohaplotig	exon	64910672	64910723	100	-	.	Parent=FBgn0085284.1.mrna1;Target=FBgn0085284.1 88 139 +
Chr1	stalkie_big_nohaplotig	exon	64910780	64910866	100	-	.	Parent=FBgn0085284.1.mrna1;Target=FBgn0085284.1 1 87 +
Chr1	stalkie_big_nohaplotig	CDS	64910173	64910286	.	-	0	Parent=FBgn0085284.1.mrna1;Target=FBgn0085284.1 331 444 +
Chr1	stalkie_big_nohaplotig	CDS	64910378	64910487	.	-	2	Parent=FBgn0085284.1.mrna1;Target=FBgn0085284.1 221 330 +
Chr1	stalkie_big_nohaplotig	CDS	64910540	64910620	.	-	2	Parent=FBgn0085284.1.mrna1;Target=FBgn0085284.1 140 220 +
Chr1	stalkie_big_nohaplotig	CDS	64910672	64910723	.	-	0	Parent=FBgn0085284.1.mrna1;Target=FBgn0085284.1 88 139 +
Chr1	stalkie_big_nohaplotig	CDS	64910780	64910866	.	-	0	Parent=FBgn0085284.1.mrna1;Target=FBgn0085284.1 1 87 +
Chr1	gffcl	locus	64937482	66878441	.	-	.	ID=RLOC_00008561;geneIDs=comp150455_c0_seq1.path1;transcripts=comp150455_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64937482	66878441	.	-	.	ID=comp150455_c0_seq1.mrna1;geneID=comp150455_c0_seq1.path1;Name=comp150455_c0_seq1;Dir=indeterminatecoverage=80.5;identity=98.5;matches=915;mismatches=4;indels=10;unknowns=0;locus=RLOC_00008561
Chr1	stalkie_big_nohaplotig	exon	64937482	64937496	100	-	.	Parent=comp150455_c0_seq1.mrna1;Target=comp150455_c0_seq1 937 923 .
Chr1	stalkie_big_nohaplotig	exon	64939374	64939377	100	-	.	Parent=comp150455_c0_seq1.mrna1;Target=comp150455_c0_seq1 922 919 .
Chr1	stalkie_big_nohaplotig	exon	64939517	64939527	100	-	.	Parent=comp150455_c0_seq1.mrna1;Target=comp150455_c0_seq1 918 908 .
Chr1	stalkie_big_nohaplotig	exon	64941942	64941947	100	-	.	Parent=comp150455_c0_seq1.mrna1;Target=comp150455_c0_seq1 907 902 .
Chr1	stalkie_big_nohaplotig	exon	64946737	64946750	35	-	.	Parent=comp150455_c0_seq1.mrna1;Target=comp150455_c0_seq1 901 897 .
Chr1	stalkie_big_nohaplotig	exon	64950637	64950640	100	-	.	Parent=comp150455_c0_seq1.mrna1;Target=comp150455_c0_seq1 896 893 .
Chr1	stalkie_big_nohaplotig	exon	64966986	64966990	100	-	.	Parent=comp150455_c0_seq1.mrna1;Target=comp150455_c0_seq1 892 888 .
Chr1	stalkie_big_nohaplotig	exon	64972977	64972981	100	-	.	Parent=comp150455_c0_seq1.mrna1;Target=comp150455_c0_seq1 887 883 .
Chr1	stalkie_big_nohaplotig	exon	64976293	64976299	100	-	.	Parent=comp150455_c0_seq1.mrna1;Target=comp150455_c0_seq1 882 876 .
Chr1	stalkie_big_nohaplotig	exon	64979483	64979486	100	-	.	Parent=comp150455_c0_seq1.mrna1;Target=comp150455_c0_seq1 875 872 .
Chr1	stalkie_big_nohaplotig	exon	64980455	64980457	100	-	.	Parent=comp150455_c0_seq1.mrna1;Target=comp150455_c0_seq1 871 869 .
Chr1	stalkie_big_nohaplotig	exon	64981389	64981394	100	-	.	Parent=comp150455_c0_seq1.mrna1;Target=comp150455_c0_seq1 868 863 .
Chr1	stalkie_big_nohaplotig	exon	64986076	64986078	100	-	.	Parent=comp150455_c0_seq1.mrna1;Target=comp150455_c0_seq1 862 860 .
Chr1	stalkie_big_nohaplotig	exon	64992893	64992904	100	-	.	Parent=comp150455_c0_seq1.mrna1;Target=comp150455_c0_seq1 859 848 .
Chr1	stalkie_big_nohaplotig	exon	65008155	65008157	100	-	.	Parent=comp150455_c0_seq1.mrna1;Target=comp150455_c0_seq1 847 845 .
Chr1	stalkie_big_nohaplotig	exon	65032168	65032169	100	-	.	Parent=comp150455_c0_seq1.mrna1;Target=comp150455_c0_seq1 844 843 .
Chr1	stalkie_big_nohaplotig	exon	65033067	65033072	100	-	.	Parent=comp150455_c0_seq1.mrna1;Target=comp150455_c0_seq1 842 837 .
Chr1	stalkie_big_nohaplotig	exon	66877501	66877667	100	-	.	Parent=comp150455_c0_seq1.mrna1;Target=comp150455_c0_seq1 836 670 .
Chr1	stalkie_big_nohaplotig	exon	66877791	66878441	99	-	.	Parent=comp150455_c0_seq1.mrna1;Target=comp150455_c0_seq1 669 18 .
Chr1	stalkie_big_nohaplotig	CDS	66877592	66877667	.	-	1	Parent=comp150455_c0_seq1.mrna1;Target=comp150455_c0_seq1 745 670 .
Chr1	stalkie_big_nohaplotig	CDS	66877791	66878050	.	-	0	Parent=comp150455_c0_seq1.mrna1;Target=comp150455_c0_seq1 669 410 .
Chr1	gffcl	locus	64942291	64950404	.	+	.	ID=RLOC_00008562;geneIDs=FBgn0037146.1.path1;transcripts=FBgn0037146.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	64942291	64950404	.	+	.	ID=FBgn0037146.1.mrna1;geneID=FBgn0037146.1.path1;Name=FBgn0037146.1;Dir=sensecoverage=100.0;identity=99.7;matches=2337;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008562
Chr1	stalkie_big_nohaplotig	exon	64942291	64942392	100	+	.	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 1 102 +
Chr1	stalkie_big_nohaplotig	exon	64944198	64944368	98	+	.	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 103 273 +
Chr1	stalkie_big_nohaplotig	exon	64944451	64944594	98	+	.	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 274 417 +
Chr1	stalkie_big_nohaplotig	exon	64944649	64944756	100	+	.	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 418 525 +
Chr1	stalkie_big_nohaplotig	exon	64944809	64944976	100	+	.	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 526 693 +
Chr1	stalkie_big_nohaplotig	exon	64945044	64945232	100	+	.	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 694 882 +
Chr1	stalkie_big_nohaplotig	exon	64945628	64945820	99	+	.	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 883 1075 +
Chr1	stalkie_big_nohaplotig	exon	64945941	64946182	100	+	.	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 1076 1317 +
Chr1	stalkie_big_nohaplotig	exon	64949201	64949458	100	+	.	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 1318 1575 +
Chr1	stalkie_big_nohaplotig	exon	64949521	64949746	100	+	.	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 1576 1801 +
Chr1	stalkie_big_nohaplotig	exon	64949798	64950076	99	+	.	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 1802 2080 +
Chr1	stalkie_big_nohaplotig	exon	64950142	64950404	100	+	.	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 2081 2343 +
Chr1	stalkie_big_nohaplotig	CDS	64942291	64942392	.	+	0	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 1 102 +
Chr1	stalkie_big_nohaplotig	CDS	64944198	64944368	.	+	0	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 103 273 +
Chr1	stalkie_big_nohaplotig	CDS	64944451	64944594	.	+	0	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 274 417 +
Chr1	stalkie_big_nohaplotig	CDS	64944649	64944756	.	+	0	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 418 525 +
Chr1	stalkie_big_nohaplotig	CDS	64944809	64944976	.	+	0	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 526 693 +
Chr1	stalkie_big_nohaplotig	CDS	64945044	64945232	.	+	0	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 694 882 +
Chr1	stalkie_big_nohaplotig	CDS	64945628	64945820	.	+	0	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 883 1075 +
Chr1	stalkie_big_nohaplotig	CDS	64945941	64946182	.	+	2	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 1076 1317 +
Chr1	stalkie_big_nohaplotig	CDS	64949201	64949458	.	+	0	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 1318 1575 +
Chr1	stalkie_big_nohaplotig	CDS	64949521	64949746	.	+	0	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 1576 1801 +
Chr1	stalkie_big_nohaplotig	CDS	64949798	64950076	.	+	2	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 1802 2080 +
Chr1	stalkie_big_nohaplotig	CDS	64950142	64950404	.	+	2	Parent=FBgn0037146.1.mrna1;Target=FBgn0037146.1 2081 2343 +
Chr1	gffcl	locus	65052900	65053747	.	-	.	ID=RLOC_00008563;geneIDs=comp158480_c0_seq1.path1;transcripts=comp158480_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65052900	65053747	.	-	.	ID=comp158480_c0_seq1.mrna1;geneID=comp158480_c0_seq1.path1;Name=comp158480_c0_seq1;Dir=indeterminatecoverage=57.1;identity=98.5;matches=840;mismatches=8;indels=5;unknowns=0;Target=comp158480_c0_seq1 1493 641 .;CDS_Target=comp158480_c0_seq1 1341 1282 .;locus=RLOC_00008563
Chr1	stalkie_big_nohaplotig	exon	65052900	65053747	98	-	.	Parent=comp158480_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65053050	65053107	.	-	0	Parent=comp158480_c0_seq1.mrna1
Chr1	gffcl	locus	65054157	65054549	.	+	.	ID=RLOC_00008564;geneIDs=comp152352_c0_seq1.path1;transcripts=comp152352_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65054157	65054549	.	+	.	ID=comp152352_c0_seq1.mrna1;geneID=comp152352_c0_seq1.path1;Name=comp152352_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=388;mismatches=5;indels=0;unknowns=0;Target=comp152352_c0_seq1 393 1 .;CDS_Target=comp152352_c0_seq1 98 3 .;locus=RLOC_00008564
Chr1	stalkie_big_nohaplotig	exon	65054157	65054549	98	+	.	Parent=comp152352_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65054159	65054254	.	+	0	Parent=comp152352_c0_seq1.mrna1
Chr1	gffcl	locus	65055014	65055476	.	-	.	ID=RLOC_00008565;geneIDs=comp118679_c0_seq1.path1;transcripts=comp118679_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65055014	65055476	.	-	.	ID=comp118679_c0_seq1.mrna1;geneID=comp118679_c0_seq1.path1;Name=comp118679_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.4;matches=460;mismatches=3;indels=0;unknowns=0;Target=comp118679_c0_seq1 464 2 .;CDS_Target=comp118679_c0_seq1 433 356 .;locus=RLOC_00008565
Chr1	stalkie_big_nohaplotig	exon	65055014	65055476	99	-	.	Parent=comp118679_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65055045	65055122	.	-	0	Parent=comp118679_c0_seq1.mrna1
Chr1	gffcl	locus	65066780	65067433	.	+	.	ID=RLOC_00008566;geneIDs=FBgn0037149.1.path1;transcripts=FBgn0037149.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65066780	65067433	.	+	.	ID=FBgn0037149.1.mrna1;geneID=FBgn0037149.1.path1;Name=FBgn0037149.1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=648;mismatches=6;indels=0;unknowns=0;Target=FBgn0037149.1 654 1 .;locus=RLOC_00008566
Chr1	stalkie_big_nohaplotig	exon	65066780	65067433	99	+	.	Parent=FBgn0037149.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65066780	65067433	.	+	0	Parent=FBgn0037149.1.mrna1
Chr1	gffcl	locus	65068178	65071544	.	-	.	ID=RLOC_00008567;geneIDs=FBgn0027532.1.path1;transcripts=FBgn0027532.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65068178	65071544	.	-	.	ID=FBgn0027532.1.mrna1;geneID=FBgn0027532.1.path1;Name=FBgn0027532.1;Dir=sensecoverage=100.0;identity=99.6;matches=3014;mismatches=13;indels=0;unknowns=0;locus=RLOC_00008567
Chr1	stalkie_big_nohaplotig	exon	65068178	65068247	98	-	.	Parent=FBgn0027532.1.mrna1;Target=FBgn0027532.1 2958 3027 +
Chr1	stalkie_big_nohaplotig	exon	65068301	65068863	99	-	.	Parent=FBgn0027532.1.mrna1;Target=FBgn0027532.1 2395 2957 +
Chr1	stalkie_big_nohaplotig	exon	65068923	65070488	99	-	.	Parent=FBgn0027532.1.mrna1;Target=FBgn0027532.1 829 2394 +
Chr1	stalkie_big_nohaplotig	exon	65070658	65071370	99	-	.	Parent=FBgn0027532.1.mrna1;Target=FBgn0027532.1 116 828 +
Chr1	stalkie_big_nohaplotig	exon	65071430	65071544	100	-	.	Parent=FBgn0027532.1.mrna1;Target=FBgn0027532.1 1 115 +
Chr1	stalkie_big_nohaplotig	CDS	65068178	65068247	.	-	1	Parent=FBgn0027532.1.mrna1;Target=FBgn0027532.1 2958 3027 +
Chr1	stalkie_big_nohaplotig	CDS	65068301	65068863	.	-	0	Parent=FBgn0027532.1.mrna1;Target=FBgn0027532.1 2395 2957 +
Chr1	stalkie_big_nohaplotig	CDS	65068923	65070488	.	-	0	Parent=FBgn0027532.1.mrna1;Target=FBgn0027532.1 829 2394 +
Chr1	stalkie_big_nohaplotig	CDS	65070658	65071370	.	-	2	Parent=FBgn0027532.1.mrna1;Target=FBgn0027532.1 116 828 +
Chr1	stalkie_big_nohaplotig	CDS	65071430	65071544	.	-	0	Parent=FBgn0027532.1.mrna1;Target=FBgn0027532.1 1 115 +
Chr1	gffcl	locus	65074458	65078954	.	+	.	ID=RLOC_00008568;geneIDs=FBgn0028500.1.path1;transcripts=FBgn0028500.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65074458	65078954	.	+	.	ID=FBgn0028500.1.mrna1;geneID=FBgn0028500.1.path1;Name=FBgn0028500.1;Dir=sensecoverage=100.0;identity=99.6;matches=4429;mismatches=17;indels=0;unknowns=0;locus=RLOC_00008568
Chr1	stalkie_big_nohaplotig	exon	65074458	65075751	99	+	.	Parent=FBgn0028500.1.mrna1;Target=FBgn0028500.1 1 1294 +
Chr1	stalkie_big_nohaplotig	exon	65075803	65078954	99	+	.	Parent=FBgn0028500.1.mrna1;Target=FBgn0028500.1 1295 4446 +
Chr1	stalkie_big_nohaplotig	CDS	65074458	65075751	.	+	0	Parent=FBgn0028500.1.mrna1;Target=FBgn0028500.1 1 1294 +
Chr1	stalkie_big_nohaplotig	CDS	65075803	65078954	.	+	2	Parent=FBgn0028500.1.mrna1;Target=FBgn0028500.1 1295 4446 +
Chr1	gffcl	locus	65086639	65088207	.	+	.	ID=RLOC_00008569;geneIDs=comp163018_c0_seq1.path1;transcripts=comp163018_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65086639	65088207	.	+	.	ID=comp163018_c0_seq1.mrna1;geneID=comp163018_c0_seq1.path1;Name=comp163018_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=1559;mismatches=10;indels=19;unknowns=0;Target=comp163018_c0_seq1 1588 1 .;CDS_Target=comp163018_c0_seq1 1288 1133 .;locus=RLOC_00008569
Chr1	stalkie_big_nohaplotig	exon	65086639	65088207	98	+	.	Parent=comp163018_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65087752	65087907	.	+	0	Parent=comp163018_c0_seq1.mrna1
Chr1	gffcl	locus	65088854	65090218	.	+	.	ID=RLOC_00008570;geneIDs=comp153513_c1_seq1.path1;transcripts=comp153513_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65088854	65090218	.	+	.	ID=comp153513_c1_seq1.mrna1;geneID=comp153513_c1_seq1.path1;Name=comp153513_c1_seq1;Dir=indeterminatecoverage=99.6;identity=99.7;matches=1361;mismatches=4;indels=0;unknowns=0;Target=comp153513_c1_seq1 1370 6 .;CDS_Target=comp153513_c1_seq1 1322 1209 .;locus=RLOC_00008570
Chr1	stalkie_big_nohaplotig	exon	65088854	65090218	99	+	.	Parent=comp153513_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65090057	65090170	.	+	0	Parent=comp153513_c1_seq1.mrna1
Chr1	gffcl	locus	65091260	65091634	.	+	.	ID=RLOC_00008571;geneIDs=comp152693_c0_seq1.path1;transcripts=comp152693_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65091260	65091634	.	+	.	ID=comp152693_c0_seq1.mrna1;geneID=comp152693_c0_seq1.path1;Name=comp152693_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=371;mismatches=4;indels=0;unknowns=0;Target=comp152693_c0_seq1 375 1 .;CDS_Target=comp152693_c0_seq1 202 101 .;locus=RLOC_00008571
Chr1	stalkie_big_nohaplotig	exon	65091260	65091634	98	+	.	Parent=comp152693_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65091360	65091461	.	+	0	Parent=comp152693_c0_seq1.mrna1
Chr1	gffcl	locus	65093884	65094361	.	-	.	ID=RLOC_00008572;geneIDs=comp149719_c0_seq1.path1;transcripts=comp149719_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65093884	65094361	.	-	.	ID=comp149719_c0_seq1.mrna1;geneID=comp149719_c0_seq1.path1;Name=comp149719_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=477;mismatches=1;indels=2;unknowns=0;Target=comp149719_c0_seq1 480 1 .;CDS_Target=comp149719_c0_seq1 173 3 .;locus=RLOC_00008572
Chr1	stalkie_big_nohaplotig	exon	65093884	65094361	99	-	.	Parent=comp149719_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65094189	65094359	.	-	0	Parent=comp149719_c0_seq1.mrna1
Chr1	gffcl	locus	65133166	65179248	.	+	.	ID=RLOC_00008573;geneIDs=comp150627_c0_seq1.path1;transcripts=comp150627_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65133166	65179248	.	+	.	ID=comp150627_c0_seq1.mrna1;geneID=comp150627_c0_seq1.path1;Name=comp150627_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=1617;mismatches=2;indels=0;unknowns=0;Target=comp150627_c0_seq1 733 1023 +;locus=RLOC_00008573
Chr1	stalkie_big_nohaplotig	exon	65133166	65133644	100	+	.	Parent=comp150627_c0_seq1.mrna1;Target=comp150627_c0_seq1 1 479 +
Chr1	stalkie_big_nohaplotig	exon	65178109	65179248	99	+	.	Parent=comp150627_c0_seq1.mrna1;Target=comp150627_c0_seq1 480 1619 +
Chr1	stalkie_big_nohaplotig	CDS	65178362	65178652	.	+	0	Parent=comp150627_c0_seq1.mrna1
Chr1	gffcl	locus	65156421	65160760	.	-	.	ID=RLOC_00008574;geneIDs=comp153675_c0_seq1.path1;transcripts=comp153675_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65156421	65160760	.	-	.	ID=comp153675_c0_seq1.mrna1;geneID=comp153675_c0_seq1.path1;Name=comp153675_c0_seq1;Dir=indeterminatecoverage=95.2;identity=90.6;matches=872;mismatches=12;indels=78;unknowns=0;Target=comp153675_c0_seq1 357 1 .;locus=RLOC_00008574
Chr1	stalkie_big_nohaplotig	exon	65156421	65156973	97	-	.	Parent=comp153675_c0_seq1.mrna1;Target=comp153675_c0_seq1 955 410 .
Chr1	stalkie_big_nohaplotig	exon	65160423	65160760	80	-	.	Parent=comp153675_c0_seq1.mrna1;Target=comp153675_c0_seq1 409 1 .
Chr1	stalkie_big_nohaplotig	CDS	65160463	65160760	.	-	0	Parent=comp153675_c0_seq1.mrna1
Chr1	gffcl	locus	65318107	65319378	.	-	.	ID=RLOC_00008577;geneIDs=ORF1800.path1;transcripts=ORF1800.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65318107	65319378	.	-	.	ID=ORF1800.mrna1;geneID=ORF1800.path1;Name=ORF1800;Dir=sensecoverage=100.0;identity=99.4;matches=987;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008577
Chr1	stalkie_big_nohaplotig	exon	65318107	65318203	100	-	.	Parent=ORF1800.mrna1;Target=ORF1800 897 993 +
Chr1	stalkie_big_nohaplotig	exon	65318317	65318430	100	-	.	Parent=ORF1800.mrna1;Target=ORF1800 783 896 +
Chr1	stalkie_big_nohaplotig	exon	65318483	65318871	99	-	.	Parent=ORF1800.mrna1;Target=ORF1800 394 782 +
Chr1	stalkie_big_nohaplotig	exon	65318924	65319113	97	-	.	Parent=ORF1800.mrna1;Target=ORF1800 204 393 +
Chr1	stalkie_big_nohaplotig	exon	65319176	65319378	99	-	.	Parent=ORF1800.mrna1;Target=ORF1800 1 203 +
Chr1	stalkie_big_nohaplotig	CDS	65318107	65318203	.	-	1	Parent=ORF1800.mrna1;Target=ORF1800 897 993 +
Chr1	stalkie_big_nohaplotig	CDS	65318317	65318430	.	-	1	Parent=ORF1800.mrna1;Target=ORF1800 783 896 +
Chr1	stalkie_big_nohaplotig	CDS	65318483	65318871	.	-	0	Parent=ORF1800.mrna1;Target=ORF1800 394 782 +
Chr1	stalkie_big_nohaplotig	CDS	65318924	65319113	.	-	1	Parent=ORF1800.mrna1;Target=ORF1800 204 393 +
Chr1	stalkie_big_nohaplotig	CDS	65319176	65319378	.	-	0	Parent=ORF1800.mrna1;Target=ORF1800 1 203 +
Chr1	gffcl	locus	65366580	65372222	.	-	.	ID=RLOC_00008578;geneIDs=Dv_FBgn0208163.1.path1,comp162463_c0_seq1.path1;transcripts=comp162463_c0_seq1.mrna1,Dv_FBgn0208163.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65366580	65372222	.	-	.	ID=comp162463_c0_seq1.mrna1;geneID=comp162463_c0_seq1.path1;Name=comp162463_c0_seq1;Dir=sensecoverage=99.9;identity=99.3;matches=1837;mismatches=13;indels=0;unknowns=0;locus=RLOC_00008578
Chr1	stalkie_big_nohaplotig	exon	65366580	65367225	99	-	.	Parent=comp162463_c0_seq1.mrna1;Target=comp162463_c0_seq1 1205 1850 +
Chr1	stalkie_big_nohaplotig	exon	65367295	65367434	98	-	.	Parent=comp162463_c0_seq1.mrna1;Target=comp162463_c0_seq1 1065 1204 +
Chr1	stalkie_big_nohaplotig	exon	65367529	65367685	100	-	.	Parent=comp162463_c0_seq1.mrna1;Target=comp162463_c0_seq1 908 1064 +
Chr1	stalkie_big_nohaplotig	exon	65367742	65368624	99	-	.	Parent=comp162463_c0_seq1.mrna1;Target=comp162463_c0_seq1 25 907 +
Chr1	stalkie_big_nohaplotig	exon	65372199	65372222	100	-	.	Parent=comp162463_c0_seq1.mrna1;Target=comp162463_c0_seq1 1 24 +
Chr1	stalkie_big_nohaplotig	CDS	65366986	65367225	.	-	0	Parent=comp162463_c0_seq1.mrna1;Target=comp162463_c0_seq1 1205 1444 +
Chr1	stalkie_big_nohaplotig	CDS	65367295	65367434	.	-	2	Parent=comp162463_c0_seq1.mrna1;Target=comp162463_c0_seq1 1065 1204 +
Chr1	stalkie_big_nohaplotig	CDS	65367529	65367685	.	-	0	Parent=comp162463_c0_seq1.mrna1;Target=comp162463_c0_seq1 908 1064 +
Chr1	stalkie_big_nohaplotig	CDS	65367742	65368624	.	-	1	Parent=comp162463_c0_seq1.mrna1;Target=comp162463_c0_seq1 25 907 +
Chr1	stalkie_big_nohaplotig	CDS	65372199	65372221	.	-	0	Parent=comp162463_c0_seq1.mrna1;Target=comp162463_c0_seq1 2 24 +
Chr1	stalkie_big_nohaplotig	mRNA	65366990	65372221	.	-	.	ID=Dv_FBgn0208163.1.mrna1;geneID=Dv_FBgn0208163.1.path1;Name=Dv_FBgn0208163.1;Dir=sensecoverage=99.9;identity=99.6;matches=1370;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008578
Chr1	stalkie_big_nohaplotig	exon	65366990	65367225	100	-	.	Parent=Dv_FBgn0208163.1.mrna1;Target=Dv_FBgn0208163.1 1141 1376 +
Chr1	stalkie_big_nohaplotig	exon	65367295	65367434	98	-	.	Parent=Dv_FBgn0208163.1.mrna1;Target=Dv_FBgn0208163.1 1001 1140 +
Chr1	stalkie_big_nohaplotig	exon	65367529	65367685	100	-	.	Parent=Dv_FBgn0208163.1.mrna1;Target=Dv_FBgn0208163.1 844 1000 +
Chr1	stalkie_big_nohaplotig	exon	65367742	65367972	99	-	.	Parent=Dv_FBgn0208163.1.mrna1;Target=Dv_FBgn0208163.1 613 843 +
Chr1	stalkie_big_nohaplotig	exon	65368036	65368624	99	-	.	Parent=Dv_FBgn0208163.1.mrna1;Target=Dv_FBgn0208163.1 24 612 +
Chr1	stalkie_big_nohaplotig	exon	65372199	65372221	100	-	.	Parent=Dv_FBgn0208163.1.mrna1;Target=Dv_FBgn0208163.1 1 23 +
Chr1	stalkie_big_nohaplotig	CDS	65366992	65367225	.	-	0	Parent=Dv_FBgn0208163.1.mrna1;Target=Dv_FBgn0208163.1 1141 1374 +
Chr1	stalkie_big_nohaplotig	CDS	65367295	65367434	.	-	2	Parent=Dv_FBgn0208163.1.mrna1;Target=Dv_FBgn0208163.1 1001 1140 +
Chr1	stalkie_big_nohaplotig	CDS	65367529	65367685	.	-	0	Parent=Dv_FBgn0208163.1.mrna1;Target=Dv_FBgn0208163.1 844 1000 +
Chr1	stalkie_big_nohaplotig	CDS	65367742	65367972	.	-	0	Parent=Dv_FBgn0208163.1.mrna1;Target=Dv_FBgn0208163.1 613 843 +
Chr1	stalkie_big_nohaplotig	CDS	65368036	65368624	.	-	1	Parent=Dv_FBgn0208163.1.mrna1;Target=Dv_FBgn0208163.1 24 612 +
Chr1	stalkie_big_nohaplotig	CDS	65372199	65372221	.	-	0	Parent=Dv_FBgn0208163.1.mrna1;Target=Dv_FBgn0208163.1 1 23 +
Chr1	gffcl	locus	65421655	65422290	.	+	.	ID=RLOC_00008579;geneIDs=comp114356_c0_seq1.path1;transcripts=comp114356_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65421655	65422290	.	+	.	ID=comp114356_c0_seq1.mrna1;geneID=comp114356_c0_seq1.path1;Name=comp114356_c0_seq1;Dir=antisensecoverage=98.6;identity=99.8;matches=558;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008579
Chr1	stalkie_big_nohaplotig	exon	65421655	65421851	99	+	.	Parent=comp114356_c0_seq1.mrna1;Target=comp114356_c0_seq1 371 567 -
Chr1	stalkie_big_nohaplotig	exon	65421929	65422290	100	+	.	Parent=comp114356_c0_seq1.mrna1;Target=comp114356_c0_seq1 9 370 -
Chr1	stalkie_big_nohaplotig	CDS	65421692	65421851	.	+	0	Parent=comp114356_c0_seq1.mrna1;Target=comp114356_c0_seq1 371 530 .
Chr1	stalkie_big_nohaplotig	CDS	65421929	65422137	.	+	2	Parent=comp114356_c0_seq1.mrna1;Target=comp114356_c0_seq1 162 370 .
Chr1	gffcl	locus	65432356	65433131	.	-	.	ID=RLOC_00008580;geneIDs=comp149408_c0_seq1.path1;transcripts=comp149408_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65432356	65433131	.	-	.	ID=comp149408_c0_seq1.mrna1;geneID=comp149408_c0_seq1.path1;Name=comp149408_c0_seq1;Dir=indeterminatecoverage=64.6;identity=99.2;matches=770;mismatches=6;indels=0;unknowns=0;Target=comp149408_c0_seq1 776 1 .;CDS_Target=comp149408_c0_seq1 644 543 .;locus=RLOC_00008580
Chr1	stalkie_big_nohaplotig	exon	65432356	65433131	99	-	.	Parent=comp149408_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65432488	65432589	.	-	0	Parent=comp149408_c0_seq1.mrna1
Chr1	gffcl	locus	65450050	65450671	.	+	.	ID=RLOC_00008581;geneIDs=comp118927_c0_seq1.path1;transcripts=comp118927_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65450050	65450671	.	+	.	ID=comp118927_c0_seq1.mrna1;geneID=comp118927_c0_seq1.path1;Name=comp118927_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=614;mismatches=8;indels=0;unknowns=0;Target=comp118927_c0_seq1 622 1 .;CDS_Target=comp118927_c0_seq1 369 73 .;locus=RLOC_00008581
Chr1	stalkie_big_nohaplotig	exon	65450050	65450671	98	+	.	Parent=comp118927_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65450122	65450418	.	+	0	Parent=comp118927_c0_seq1.mrna1
Chr1	gffcl	locus	65472914	65473335	.	+	.	ID=RLOC_00008582;geneIDs=comp66234_c0_seq1.path1;transcripts=comp66234_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65472914	65473335	.	+	.	ID=comp66234_c0_seq1.mrna1;geneID=comp66234_c0_seq1.path1;Name=comp66234_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.2;matches=406;mismatches=16;indels=0;unknowns=0;Target=comp66234_c0_seq1 422 1 .;CDS_Target=comp66234_c0_seq1 124 2 .;locus=RLOC_00008582
Chr1	stalkie_big_nohaplotig	exon	65472914	65473335	96	+	.	Parent=comp66234_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65472915	65473037	.	+	0	Parent=comp66234_c0_seq1.mrna1
Chr1	gffcl	locus	65514324	65516834	.	-	.	ID=RLOC_00008583;geneIDs=FBgn0037153.1.path1;transcripts=FBgn0037153.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65514324	65516834	.	-	.	ID=FBgn0037153.1.mrna1;geneID=FBgn0037153.1.path1;Name=FBgn0037153.1;Dir=sensecoverage=100.0;identity=99.6;matches=1688;mismatches=6;indels=1;unknowns=0;locus=RLOC_00008583
Chr1	stalkie_big_nohaplotig	exon	65514324	65514356	100	-	.	Parent=FBgn0037153.1.mrna1;Target=FBgn0037153.1 1663 1695 +
Chr1	stalkie_big_nohaplotig	exon	65514423	65514558	99	-	.	Parent=FBgn0037153.1.mrna1;Target=FBgn0037153.1 1526 1662 +
Chr1	stalkie_big_nohaplotig	exon	65514715	65514877	99	-	.	Parent=FBgn0037153.1.mrna1;Target=FBgn0037153.1 1363 1525 +
Chr1	stalkie_big_nohaplotig	exon	65515011	65515180	100	-	.	Parent=FBgn0037153.1.mrna1;Target=FBgn0037153.1 1193 1362 +
Chr1	stalkie_big_nohaplotig	exon	65515280	65515475	99	-	.	Parent=FBgn0037153.1.mrna1;Target=FBgn0037153.1 997 1192 +
Chr1	stalkie_big_nohaplotig	exon	65515554	65515739	100	-	.	Parent=FBgn0037153.1.mrna1;Target=FBgn0037153.1 811 996 +
Chr1	stalkie_big_nohaplotig	exon	65515841	65516272	99	-	.	Parent=FBgn0037153.1.mrna1;Target=FBgn0037153.1 379 810 +
Chr1	stalkie_big_nohaplotig	exon	65516457	65516834	99	-	.	Parent=FBgn0037153.1.mrna1;Target=FBgn0037153.1 1 378 +
Chr1	stalkie_big_nohaplotig	CDS	65514324	65514356	.	-	1	Parent=FBgn0037153.1.mrna1;Target=FBgn0037153.1 1663 1695 +
Chr1	stalkie_big_nohaplotig	CDS	65514423	65514558	.	-	2	Parent=FBgn0037153.1.mrna1;Target=FBgn0037153.1 1526 1662 +
Chr1	stalkie_big_nohaplotig	CDS	65514715	65514877	.	-	0	Parent=FBgn0037153.1.mrna1;Target=FBgn0037153.1 1363 1525 +
Chr1	stalkie_big_nohaplotig	CDS	65515011	65515180	.	-	2	Parent=FBgn0037153.1.mrna1;Target=FBgn0037153.1 1193 1362 +
Chr1	stalkie_big_nohaplotig	CDS	65515280	65515475	.	-	0	Parent=FBgn0037153.1.mrna1;Target=FBgn0037153.1 997 1192 +
Chr1	stalkie_big_nohaplotig	CDS	65515554	65515739	.	-	0	Parent=FBgn0037153.1.mrna1;Target=FBgn0037153.1 811 996 +
Chr1	stalkie_big_nohaplotig	CDS	65515841	65516272	.	-	0	Parent=FBgn0037153.1.mrna1;Target=FBgn0037153.1 379 810 +
Chr1	stalkie_big_nohaplotig	CDS	65516457	65516834	.	-	0	Parent=FBgn0037153.1.mrna1;Target=FBgn0037153.1 1 378 +
Chr1	stalkie_big_nohaplotig	mRNA	65689226	65765862	.	-	.	ID=comp150797_c0_seq1.mrna1;geneID=comp150797_c0_seq1.path1;Name=comp150797_c0_seq1;Dir=indeterminatecoverage=95.7;identity=96.5;matches=719;mismatches=19;indels=7;unknowns=0;Target=comp150797_c0_seq1 89 3 .;locus=RLOC_00008584
Chr1	stalkie_big_nohaplotig	exon	65689226	65689233	100	-	.	Parent=comp150797_c0_seq1.mrna1;Target=comp150797_c0_seq1 740 733 .
Chr1	stalkie_big_nohaplotig	exon	65691051	65691052	100	-	.	Parent=comp150797_c0_seq1.mrna1;Target=comp150797_c0_seq1 732 731 .
Chr1	stalkie_big_nohaplotig	exon	65702030	65702037	100	-	.	Parent=comp150797_c0_seq1.mrna1;Target=comp150797_c0_seq1 730 723 .
Chr1	stalkie_big_nohaplotig	exon	65709549	65709550	100	-	.	Parent=comp150797_c0_seq1.mrna1;Target=comp150797_c0_seq1 722 721 .
Chr1	stalkie_big_nohaplotig	exon	65716677	65716680	100	-	.	Parent=comp150797_c0_seq1.mrna1;Target=comp150797_c0_seq1 720 717 .
Chr1	stalkie_big_nohaplotig	exon	65722182	65722186	100	-	.	Parent=comp150797_c0_seq1.mrna1;Target=comp150797_c0_seq1 716 712 .
Chr1	stalkie_big_nohaplotig	exon	65726917	65726918	100	-	.	Parent=comp150797_c0_seq1.mrna1;Target=comp150797_c0_seq1 711 710 .
Chr1	stalkie_big_nohaplotig	exon	65731830	65731837	100	-	.	Parent=comp150797_c0_seq1.mrna1;Target=comp150797_c0_seq1 709 702 .
Chr1	stalkie_big_nohaplotig	exon	65732500	65732503	100	-	.	Parent=comp150797_c0_seq1.mrna1;Target=comp150797_c0_seq1 701 698 .
Chr1	stalkie_big_nohaplotig	exon	65733933	65733944	91	-	.	Parent=comp150797_c0_seq1.mrna1;Target=comp150797_c0_seq1 697 686 .
Chr1	stalkie_big_nohaplotig	exon	65734565	65734566	100	-	.	Parent=comp150797_c0_seq1.mrna1;Target=comp150797_c0_seq1 685 684 .
Chr1	stalkie_big_nohaplotig	exon	65740831	65740832	100	-	.	Parent=comp150797_c0_seq1.mrna1;Target=comp150797_c0_seq1 683 682 .
Chr1	stalkie_big_nohaplotig	exon	65743687	65743691	80	-	.	Parent=comp150797_c0_seq1.mrna1;Target=comp150797_c0_seq1 681 677 .
Chr1	stalkie_big_nohaplotig	exon	65748679	65748686	100	-	.	Parent=comp150797_c0_seq1.mrna1;Target=comp150797_c0_seq1 676 669 .
Chr1	stalkie_big_nohaplotig	exon	65754406	65754449	59	-	.	Parent=comp150797_c0_seq1.mrna1;Target=comp150797_c0_seq1 668 630 .
Chr1	stalkie_big_nohaplotig	exon	65765236	65765862	99	-	.	Parent=comp150797_c0_seq1.mrna1;Target=comp150797_c0_seq1 629 1 .
Chr1	stalkie_big_nohaplotig	CDS	65765774	65765860	.	-	0	Parent=comp150797_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65740783	65743659	.	-	.	ID=comp144250_c0_seq1.mrna1;geneID=comp144250_c0_seq1.path1;Name=comp144250_c0_seq1;Dir=antisensecoverage=98.2;identity=97.7;matches=375;mismatches=7;indels=2;unknowns=0;Target=comp144250_c0_seq1 214 288 .;locus=RLOC_00008584
Chr1	stalkie_big_nohaplotig	exon	65740783	65741072	97	-	.	Parent=comp144250_c0_seq1.mrna1;Target=comp144250_c0_seq1 1 288 -
Chr1	stalkie_big_nohaplotig	exon	65743566	65743659	98	-	.	Parent=comp144250_c0_seq1.mrna1;Target=comp144250_c0_seq1 289 382 -
Chr1	stalkie_big_nohaplotig	CDS	65740998	65741072	.	-	0	Parent=comp144250_c0_seq1.mrna1
Chr1	gffcl	locus	65563123	65565003	.	-	.	ID=RLOC_00008585;geneIDs=FBgn0000351.1.path1;transcripts=FBgn0000351.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65563123	65565003	.	-	.	ID=FBgn0000351.1.mrna1;geneID=FBgn0000351.1.path1;Name=FBgn0000351.1;Dir=sensecoverage=100.0;identity=99.5;matches=1003;mismatches=5;indels=0;unknowns=0;locus=RLOC_00008585
Chr1	stalkie_big_nohaplotig	exon	65563123	65563409	100	-	.	Parent=FBgn0000351.1.mrna1;Target=FBgn0000351.1 722 1008 +
Chr1	stalkie_big_nohaplotig	exon	65563941	65564090	99	-	.	Parent=FBgn0000351.1.mrna1;Target=FBgn0000351.1 572 721 +
Chr1	stalkie_big_nohaplotig	exon	65564374	65564754	99	-	.	Parent=FBgn0000351.1.mrna1;Target=FBgn0000351.1 191 571 +
Chr1	stalkie_big_nohaplotig	exon	65564814	65565003	98	-	.	Parent=FBgn0000351.1.mrna1;Target=FBgn0000351.1 1 190 +
Chr1	stalkie_big_nohaplotig	CDS	65563123	65563409	.	-	2	Parent=FBgn0000351.1.mrna1;Target=FBgn0000351.1 722 1008 +
Chr1	stalkie_big_nohaplotig	CDS	65563941	65564090	.	-	2	Parent=FBgn0000351.1.mrna1;Target=FBgn0000351.1 572 721 +
Chr1	stalkie_big_nohaplotig	CDS	65564374	65564754	.	-	2	Parent=FBgn0000351.1.mrna1;Target=FBgn0000351.1 191 571 +
Chr1	stalkie_big_nohaplotig	CDS	65564814	65565003	.	-	0	Parent=FBgn0000351.1.mrna1;Target=FBgn0000351.1 1 190 +
Chr1	gffcl	locus	65568802	65572198	.	+	.	ID=RLOC_00008586;geneIDs=comp158808_c2_seq1.path1;transcripts=comp158808_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65568802	65572198	.	+	.	ID=comp158808_c2_seq1.mrna1;geneID=comp158808_c2_seq1.path1;Name=comp158808_c2_seq1;Dir=sensecoverage=100.0;identity=89.0;matches=1024;mismatches=43;indels=84;unknowns=0;Target=comp158808_c2_seq1 189 224 +;locus=RLOC_00008586
Chr1	stalkie_big_nohaplotig	exon	65568802	65568822	100	+	.	Parent=comp158808_c2_seq1.mrna1;Target=comp158808_c2_seq1 1 21 +
Chr1	stalkie_big_nohaplotig	exon	65571134	65572198	88	+	.	Parent=comp158808_c2_seq1.mrna1;Target=comp158808_c2_seq1 22 1132 +
Chr1	stalkie_big_nohaplotig	CDS	65571265	65571313	.	+	0	Parent=comp158808_c2_seq1.mrna1
Chr1	gffcl	locus	65569217	65569592	.	+	.	ID=RLOC_00008587;geneIDs=comp118667_c0_seq1.path1;transcripts=comp118667_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65569217	65569592	.	+	.	ID=comp118667_c0_seq1.mrna1;geneID=comp118667_c0_seq1.path1;Name=comp118667_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=370;mismatches=6;indels=5;unknowns=0;Target=comp118667_c0_seq1 381 1 .;CDS_Target=comp118667_c0_seq1 60 1 .;locus=RLOC_00008587
Chr1	stalkie_big_nohaplotig	exon	65569217	65569592	97	+	.	Parent=comp118667_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65569217	65569276	.	+	0	Parent=comp118667_c0_seq1.mrna1
Chr1	gffcl	locus	65573184	65573598	.	-	.	ID=RLOC_00008588;geneIDs=comp140028_c0_seq1.path1;transcripts=comp140028_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65573184	65573598	.	-	.	ID=comp140028_c0_seq1.mrna1;geneID=comp140028_c0_seq1.path1;Name=comp140028_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=402;mismatches=13;indels=0;unknowns=0;Target=comp140028_c0_seq1 415 1 .;CDS_Target=comp140028_c0_seq1 214 92 .;locus=RLOC_00008588
Chr1	stalkie_big_nohaplotig	exon	65573184	65573598	96	-	.	Parent=comp140028_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65573385	65573507	.	-	0	Parent=comp140028_c0_seq1.mrna1
Chr1	gffcl	locus	65575352	65578890	.	-	.	ID=RLOC_00008589;geneIDs=comp161334_c0_seq1.path1;transcripts=comp161334_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65575352	65578890	.	-	.	ID=comp161334_c0_seq1.mrna1;geneID=comp161334_c0_seq1.path1;Name=comp161334_c0_seq1;Dir=antisensecoverage=100.0;identity=96.1;matches=1242;mismatches=30;indels=21;unknowns=0;Target=comp161334_c0_seq1 213 347 .;locus=RLOC_00008589
Chr1	stalkie_big_nohaplotig	exon	65575352	65576446	96	-	.	Parent=comp161334_c0_seq1.mrna1;Target=comp161334_c0_seq1 1 1103 -
Chr1	stalkie_big_nohaplotig	exon	65576513	65576672	93	-	.	Parent=comp161334_c0_seq1.mrna1;Target=comp161334_c0_seq1 1104 1262 -
Chr1	stalkie_big_nohaplotig	exon	65578867	65578890	100	-	.	Parent=comp161334_c0_seq1.mrna1;Target=comp161334_c0_seq1 1263 1286 -
Chr1	stalkie_big_nohaplotig	CDS	65575564	65575698	.	-	0	Parent=comp161334_c0_seq1.mrna1
Chr1	gffcl	locus	65618718	65626673	.	-	.	ID=RLOC_00008591;geneIDs=comp153909_c0_seq1.path1;transcripts=comp153909_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65618718	65626673	.	-	.	ID=comp153909_c0_seq1.mrna1;geneID=comp153909_c0_seq1.path1;Name=comp153909_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=1265;mismatches=2;indels=0;unknowns=0;Target=comp153909_c0_seq1 859 960 +;locus=RLOC_00008591
Chr1	stalkie_big_nohaplotig	exon	65618718	65619781	99	-	.	Parent=comp153909_c0_seq1.mrna1;Target=comp153909_c0_seq1 204 1267 +
Chr1	stalkie_big_nohaplotig	exon	65626471	65626673	100	-	.	Parent=comp153909_c0_seq1.mrna1;Target=comp153909_c0_seq1 1 203 +
Chr1	stalkie_big_nohaplotig	CDS	65619025	65619126	.	-	0	Parent=comp153909_c0_seq1.mrna1
Chr1	gffcl	locus	65674002	65674604	.	-	.	ID=RLOC_00008592;geneIDs=comp98258_c0_seq1.path1;transcripts=comp98258_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65674002	65674604	.	-	.	ID=comp98258_c0_seq1.mrna1;geneID=comp98258_c0_seq1.path1;Name=comp98258_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=602;mismatches=1;indels=0;unknowns=0;Target=comp98258_c0_seq1 603 1 .;CDS_Target=comp98258_c0_seq1 322 182 .;locus=RLOC_00008592
Chr1	stalkie_big_nohaplotig	exon	65674002	65674604	99	-	.	Parent=comp98258_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65674283	65674423	.	-	0	Parent=comp98258_c0_seq1.mrna1
Chr1	gffcl	locus	65718291	65723591	.	+	.	ID=RLOC_00008593;geneIDs=FBgn0261953.1.path1;transcripts=FBgn0261953.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65718291	65723591	.	+	.	ID=FBgn0261953.1.mrna1;geneID=FBgn0261953.1.path1;Name=FBgn0261953.1;Dir=sensecoverage=93.7;identity=99.9;matches=1250;mismatches=0;indels=1;unknowns=0;locus=RLOC_00008593
Chr1	stalkie_big_nohaplotig	exon	65718291	65718521	100	+	.	Parent=FBgn0261953.1.mrna1;Target=FBgn0261953.1 85 315 +
Chr1	stalkie_big_nohaplotig	exon	65718665	65718832	100	+	.	Parent=FBgn0261953.1.mrna1;Target=FBgn0261953.1 316 483 +
Chr1	stalkie_big_nohaplotig	exon	65720117	65720324	100	+	.	Parent=FBgn0261953.1.mrna1;Target=FBgn0261953.1 484 691 +
Chr1	stalkie_big_nohaplotig	exon	65720915	65721104	100	+	.	Parent=FBgn0261953.1.mrna1;Target=FBgn0261953.1 692 881 +
Chr1	stalkie_big_nohaplotig	exon	65721173	65721437	100	+	.	Parent=FBgn0261953.1.mrna1;Target=FBgn0261953.1 882 1146 +
Chr1	stalkie_big_nohaplotig	exon	65723346	65723513	100	+	.	Parent=FBgn0261953.1.mrna1;Target=FBgn0261953.1 1147 1314 +
Chr1	stalkie_big_nohaplotig	exon	65723572	65723591	95	+	.	Parent=FBgn0261953.1.mrna1;Target=FBgn0261953.1 1315 1335 +
Chr1	stalkie_big_nohaplotig	CDS	65718291	65718521	.	+	0	Parent=FBgn0261953.1.mrna1;Target=FBgn0261953.1 85 315 +
Chr1	stalkie_big_nohaplotig	CDS	65718665	65718832	.	+	0	Parent=FBgn0261953.1.mrna1;Target=FBgn0261953.1 316 483 +
Chr1	stalkie_big_nohaplotig	CDS	65720117	65720324	.	+	0	Parent=FBgn0261953.1.mrna1;Target=FBgn0261953.1 484 691 +
Chr1	stalkie_big_nohaplotig	CDS	65720915	65721104	.	+	2	Parent=FBgn0261953.1.mrna1;Target=FBgn0261953.1 692 881 +
Chr1	stalkie_big_nohaplotig	CDS	65721173	65721437	.	+	1	Parent=FBgn0261953.1.mrna1;Target=FBgn0261953.1 882 1146 +
Chr1	stalkie_big_nohaplotig	CDS	65723346	65723513	.	+	0	Parent=FBgn0261953.1.mrna1;Target=FBgn0261953.1 1147 1314 +
Chr1	stalkie_big_nohaplotig	CDS	65723572	65723591	.	+	0	Parent=FBgn0261953.1.mrna1;Target=FBgn0261953.1 1315 1335 +
Chr1	gffcl	locus	65723921	65724236	.	-	.	ID=RLOC_00008594;geneIDs=comp268663_c0_seq1.path1;transcripts=comp268663_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65723921	65724236	.	-	.	ID=comp268663_c0_seq1.mrna1;geneID=comp268663_c0_seq1.path1;Name=comp268663_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=316;mismatches=0;indels=0;unknowns=0;Target=comp268663_c0_seq1 316 1 .;CDS_Target=comp268663_c0_seq1 316 233 .;locus=RLOC_00008594
Chr1	stalkie_big_nohaplotig	exon	65723921	65724236	100	-	.	Parent=comp268663_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65723921	65724004	.	-	0	Parent=comp268663_c0_seq1.mrna1
Chr1	gffcl	locus	65733265	65734291	.	-	.	ID=RLOC_00008595;geneIDs=FBgn0036932.1.path1;transcripts=FBgn0036932.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65733265	65734291	.	-	.	ID=FBgn0036932.1.mrna1;geneID=FBgn0036932.1.path1;Name=FBgn0036932.1;Dir=sensecoverage=100.0;identity=100.0;matches=543;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008595
Chr1	stalkie_big_nohaplotig	exon	65733265	65733354	100	-	.	Parent=FBgn0036932.1.mrna1;Target=FBgn0036932.1 454 543 +
Chr1	stalkie_big_nohaplotig	exon	65733411	65733481	100	-	.	Parent=FBgn0036932.1.mrna1;Target=FBgn0036932.1 383 453 +
Chr1	stalkie_big_nohaplotig	exon	65733792	65733925	100	-	.	Parent=FBgn0036932.1.mrna1;Target=FBgn0036932.1 249 382 +
Chr1	stalkie_big_nohaplotig	exon	65733989	65734155	100	-	.	Parent=FBgn0036932.1.mrna1;Target=FBgn0036932.1 82 248 +
Chr1	stalkie_big_nohaplotig	exon	65734211	65734291	100	-	.	Parent=FBgn0036932.1.mrna1;Target=FBgn0036932.1 1 81 +
Chr1	stalkie_big_nohaplotig	CDS	65733265	65733354	.	-	0	Parent=FBgn0036932.1.mrna1;Target=FBgn0036932.1 454 543 +
Chr1	stalkie_big_nohaplotig	CDS	65733411	65733481	.	-	2	Parent=FBgn0036932.1.mrna1;Target=FBgn0036932.1 383 453 +
Chr1	stalkie_big_nohaplotig	CDS	65733792	65733925	.	-	1	Parent=FBgn0036932.1.mrna1;Target=FBgn0036932.1 249 382 +
Chr1	stalkie_big_nohaplotig	CDS	65733989	65734155	.	-	0	Parent=FBgn0036932.1.mrna1;Target=FBgn0036932.1 82 248 +
Chr1	stalkie_big_nohaplotig	CDS	65734211	65734291	.	-	0	Parent=FBgn0036932.1.mrna1;Target=FBgn0036932.1 1 81 +
Chr1	gffcl	locus	65735491	65737159	.	+	.	ID=RLOC_00008596;geneIDs=FBgn0037108.1.path1;transcripts=FBgn0037108.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65735491	65737159	.	+	.	ID=FBgn0037108.1.mrna1;geneID=FBgn0037108.1.path1;Name=FBgn0037108.1;Dir=sensecoverage=100.0;identity=100.0;matches=1431;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008596
Chr1	stalkie_big_nohaplotig	exon	65735491	65735507	100	+	.	Parent=FBgn0037108.1.mrna1;Target=FBgn0037108.1 1 17 +
Chr1	stalkie_big_nohaplotig	exon	65735574	65735769	100	+	.	Parent=FBgn0037108.1.mrna1;Target=FBgn0037108.1 18 213 +
Chr1	stalkie_big_nohaplotig	exon	65735824	65736282	100	+	.	Parent=FBgn0037108.1.mrna1;Target=FBgn0037108.1 214 672 +
Chr1	stalkie_big_nohaplotig	exon	65736334	65737010	100	+	.	Parent=FBgn0037108.1.mrna1;Target=FBgn0037108.1 673 1349 +
Chr1	stalkie_big_nohaplotig	exon	65737078	65737159	100	+	.	Parent=FBgn0037108.1.mrna1;Target=FBgn0037108.1 1350 1431 +
Chr1	stalkie_big_nohaplotig	CDS	65735491	65735507	.	+	0	Parent=FBgn0037108.1.mrna1;Target=FBgn0037108.1 1 17 +
Chr1	stalkie_big_nohaplotig	CDS	65735574	65735769	.	+	1	Parent=FBgn0037108.1.mrna1;Target=FBgn0037108.1 18 213 +
Chr1	stalkie_big_nohaplotig	CDS	65735824	65736282	.	+	0	Parent=FBgn0037108.1.mrna1;Target=FBgn0037108.1 214 672 +
Chr1	stalkie_big_nohaplotig	CDS	65736334	65737010	.	+	0	Parent=FBgn0037108.1.mrna1;Target=FBgn0037108.1 673 1349 +
Chr1	stalkie_big_nohaplotig	CDS	65737078	65737159	.	+	1	Parent=FBgn0037108.1.mrna1;Target=FBgn0037108.1 1350 1431 +
Chr1	gffcl	locus	65739026	65739863	.	+	.	ID=RLOC_00008597;geneIDs=FBgn0052441.1.path1;transcripts=FBgn0052441.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65739026	65739863	.	+	.	ID=FBgn0052441.1.mrna1;geneID=FBgn0052441.1.path1;Name=FBgn0052441.1;Dir=sensecoverage=100.0;identity=99.9;matches=680;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008597
Chr1	stalkie_big_nohaplotig	exon	65739026	65739085	100	+	.	Parent=FBgn0052441.1.mrna1;Target=FBgn0052441.1 1 60 +
Chr1	stalkie_big_nohaplotig	exon	65739144	65739314	100	+	.	Parent=FBgn0052441.1.mrna1;Target=FBgn0052441.1 61 231 +
Chr1	stalkie_big_nohaplotig	exon	65739363	65739743	99	+	.	Parent=FBgn0052441.1.mrna1;Target=FBgn0052441.1 232 612 +
Chr1	stalkie_big_nohaplotig	exon	65739795	65739863	100	+	.	Parent=FBgn0052441.1.mrna1;Target=FBgn0052441.1 613 681 +
Chr1	stalkie_big_nohaplotig	CDS	65739026	65739085	.	+	0	Parent=FBgn0052441.1.mrna1;Target=FBgn0052441.1 1 60 +
Chr1	stalkie_big_nohaplotig	CDS	65739144	65739314	.	+	0	Parent=FBgn0052441.1.mrna1;Target=FBgn0052441.1 61 231 +
Chr1	stalkie_big_nohaplotig	CDS	65739363	65739743	.	+	0	Parent=FBgn0052441.1.mrna1;Target=FBgn0052441.1 232 612 +
Chr1	stalkie_big_nohaplotig	CDS	65739795	65739863	.	+	0	Parent=FBgn0052441.1.mrna1;Target=FBgn0052441.1 613 681 +
Chr1	gffcl	locus	65739935	65740711	.	-	.	ID=RLOC_00008598;geneIDs=FBgn0037102.1.path1;transcripts=FBgn0037102.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65739935	65740711	.	-	.	ID=FBgn0037102.1.mrna1;geneID=FBgn0037102.1.path1;Name=FBgn0037102.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=773;mismatches=4;indels=0;unknowns=0;Target=FBgn0037102.1 777 1 .;locus=RLOC_00008598
Chr1	stalkie_big_nohaplotig	exon	65739935	65740711	99	-	.	Parent=FBgn0037102.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65739935	65740711	.	-	0	Parent=FBgn0037102.1.mrna1
Chr1	gffcl	locus	65754357	65763993	.	+	.	ID=RLOC_00008600;geneIDs=FBgn0037107.1.path1,comp62890_c0_seq1.path1,comp157401_c3_seq1.path1;transcripts=comp157401_c3_seq1.mrna1,FBgn0037107.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65754357	65763525	.	+	.	ID=comp157401_c3_seq1.mrna1;geneID=comp157401_c3_seq1.path1;Name=comp157401_c3_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=1756;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008600
Chr1	stalkie_big_nohaplotig	exon	65754357	65754458	100	+	.	Parent=comp157401_c3_seq1.mrna1;Target=comp157401_c3_seq1 1657 1758 -
Chr1	stalkie_big_nohaplotig	exon	65759264	65759348	100	+	.	Parent=comp157401_c3_seq1.mrna1;Target=comp157401_c3_seq1 1572 1656 -
Chr1	stalkie_big_nohaplotig	exon	65759492	65759830	100	+	.	Parent=comp157401_c3_seq1.mrna1;Target=comp157401_c3_seq1 1233 1571 -
Chr1	stalkie_big_nohaplotig	exon	65759886	65760155	99	+	.	Parent=comp157401_c3_seq1.mrna1;Target=comp157401_c3_seq1 963 1232 -
Chr1	stalkie_big_nohaplotig	exon	65762110	65762562	100	+	.	Parent=comp157401_c3_seq1.mrna1;Target=comp157401_c3_seq1 510 962 -
Chr1	stalkie_big_nohaplotig	exon	65762622	65762792	99	+	.	Parent=comp157401_c3_seq1.mrna1;Target=comp157401_c3_seq1 339 509 -
Chr1	stalkie_big_nohaplotig	exon	65763188	65763525	100	+	.	Parent=comp157401_c3_seq1.mrna1;Target=comp157401_c3_seq1 1 338 -
Chr1	stalkie_big_nohaplotig	CDS	65759264	65759348	.	+	0	Parent=comp157401_c3_seq1.mrna1;Target=comp157401_c3_seq1 1572 1656 .
Chr1	stalkie_big_nohaplotig	CDS	65759492	65759830	.	+	2	Parent=comp157401_c3_seq1.mrna1;Target=comp157401_c3_seq1 1233 1571 .
Chr1	stalkie_big_nohaplotig	CDS	65759886	65760155	.	+	2	Parent=comp157401_c3_seq1.mrna1;Target=comp157401_c3_seq1 963 1232 .
Chr1	stalkie_big_nohaplotig	CDS	65762110	65762243	.	+	2	Parent=comp157401_c3_seq1.mrna1;Target=comp157401_c3_seq1 829 962 .
Chr1	stalkie_big_nohaplotig	mRNA	65754447	65763325	.	+	.	ID=FBgn0037107.1.mrna1;geneID=FBgn0037107.1.path1;Name=FBgn0037107.1;Dir=sensecoverage=100.0;identity=99.9;matches=1414;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008600
Chr1	stalkie_big_nohaplotig	exon	65754447	65754458	100	+	.	Parent=FBgn0037107.1.mrna1;Target=FBgn0037107.1 1 12 +
Chr1	stalkie_big_nohaplotig	exon	65759264	65759348	100	+	.	Parent=FBgn0037107.1.mrna1;Target=FBgn0037107.1 13 97 +
Chr1	stalkie_big_nohaplotig	exon	65759492	65759830	100	+	.	Parent=FBgn0037107.1.mrna1;Target=FBgn0037107.1 98 436 +
Chr1	stalkie_big_nohaplotig	exon	65759886	65760155	99	+	.	Parent=FBgn0037107.1.mrna1;Target=FBgn0037107.1 437 706 +
Chr1	stalkie_big_nohaplotig	exon	65762110	65762207	100	+	.	Parent=FBgn0037107.1.mrna1;Target=FBgn0037107.1 707 804 +
Chr1	stalkie_big_nohaplotig	exon	65762260	65762562	100	+	.	Parent=FBgn0037107.1.mrna1;Target=FBgn0037107.1 805 1107 +
Chr1	stalkie_big_nohaplotig	exon	65762622	65762792	99	+	.	Parent=FBgn0037107.1.mrna1;Target=FBgn0037107.1 1108 1278 +
Chr1	stalkie_big_nohaplotig	exon	65763188	65763325	100	+	.	Parent=FBgn0037107.1.mrna1;Target=FBgn0037107.1 1279 1416 +
Chr1	stalkie_big_nohaplotig	CDS	65754447	65754458	.	+	0	Parent=FBgn0037107.1.mrna1;Target=FBgn0037107.1 1 12 +
Chr1	stalkie_big_nohaplotig	CDS	65759264	65759348	.	+	0	Parent=FBgn0037107.1.mrna1;Target=FBgn0037107.1 13 97 +
Chr1	stalkie_big_nohaplotig	CDS	65759492	65759830	.	+	2	Parent=FBgn0037107.1.mrna1;Target=FBgn0037107.1 98 436 +
Chr1	stalkie_big_nohaplotig	CDS	65759886	65760155	.	+	2	Parent=FBgn0037107.1.mrna1;Target=FBgn0037107.1 437 706 +
Chr1	stalkie_big_nohaplotig	CDS	65762110	65762207	.	+	2	Parent=FBgn0037107.1.mrna1;Target=FBgn0037107.1 707 804 +
Chr1	stalkie_big_nohaplotig	CDS	65762260	65762562	.	+	0	Parent=FBgn0037107.1.mrna1;Target=FBgn0037107.1 805 1107 +
Chr1	stalkie_big_nohaplotig	CDS	65762622	65762792	.	+	0	Parent=FBgn0037107.1.mrna1;Target=FBgn0037107.1 1108 1278 +
Chr1	stalkie_big_nohaplotig	CDS	65763188	65763325	.	+	0	Parent=FBgn0037107.1.mrna1;Target=FBgn0037107.1 1279 1416 +
Chr1	gffcl	locus	65764801	65795258	.	-	.	ID=RLOC_00008601;geneIDs=FBgn0052113.1.path1,comp113518_c0_seq1.path1,comp154923_c3_seq1.path1;transcripts=comp154923_c3_seq1.mrna1,comp113518_c0_seq1.mrna1,FBgn0052113.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65764801	65777602	.	-	.	ID=comp154923_c3_seq1.mrna1;geneID=comp154923_c3_seq1.path1;Name=comp154923_c3_seq1;Dir=indeterminatecoverage=61.8;identity=94.7;matches=445;mismatches=6;indels=19;unknowns=0;locus=RLOC_00008601
Chr1	stalkie_big_nohaplotig	exon	65764801	65765213	99	-	.	Parent=comp154923_c3_seq1.mrna1;Target=comp154923_c3_seq1 760 348 .
Chr1	stalkie_big_nohaplotig	exon	65770931	65770949	36	-	.	Parent=comp154923_c3_seq1.mrna1;Target=comp154923_c3_seq1 347 310 .
Chr1	stalkie_big_nohaplotig	exon	65774416	65774423	100	-	.	Parent=comp154923_c3_seq1.mrna1;Target=comp154923_c3_seq1 309 302 .
Chr1	stalkie_big_nohaplotig	exon	65776306	65776313	100	-	.	Parent=comp154923_c3_seq1.mrna1;Target=comp154923_c3_seq1 301 294 .
Chr1	stalkie_big_nohaplotig	exon	65777601	65777602	100	-	.	Parent=comp154923_c3_seq1.mrna1;Target=comp154923_c3_seq1 293 292 .
Chr1	stalkie_big_nohaplotig	CDS	65765158	65765213	.	-	2	Parent=comp154923_c3_seq1.mrna1;Target=comp154923_c3_seq1 403 348 .
Chr1	stalkie_big_nohaplotig	CDS	65770931	65770949	.	-	0	Parent=comp154923_c3_seq1.mrna1;Target=comp154923_c3_seq1 347 310 .
Chr1	stalkie_big_nohaplotig	CDS	65774416	65774423	.	-	2	Parent=comp154923_c3_seq1.mrna1;Target=comp154923_c3_seq1 309 302 .
Chr1	stalkie_big_nohaplotig	CDS	65776306	65776313	.	-	1	Parent=comp154923_c3_seq1.mrna1;Target=comp154923_c3_seq1 301 294 .
Chr1	stalkie_big_nohaplotig	mRNA	65774420	65774860	.	-	.	ID=comp113518_c0_seq1.mrna1;geneID=comp113518_c0_seq1.path1;Name=comp113518_c0_seq1;Dir=antisensecoverage=77.2;identity=93.4;matches=352;mismatches=14;indels=11;unknowns=0;Target=comp113518_c0_seq1 331 369 .;locus=RLOC_00008601
Chr1	stalkie_big_nohaplotig	exon	65774420	65774748	92	-	.	Parent=comp113518_c0_seq1.mrna1;Target=comp113518_c0_seq1 5 322 -
Chr1	stalkie_big_nohaplotig	exon	65774813	65774860	100	-	.	Parent=comp113518_c0_seq1.mrna1;Target=comp113518_c0_seq1 323 370 -
Chr1	stalkie_big_nohaplotig	CDS	65774821	65774859	.	-	0	Parent=comp113518_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65776821	65795258	.	-	.	ID=FBgn0052113.1.mrna1;geneID=FBgn0052113.1.path1;Name=FBgn0052113.1;Dir=sensecoverage=100.0;identity=99.8;matches=11385;mismatches=20;indels=1;unknowns=0;locus=RLOC_00008601
Chr1	stalkie_big_nohaplotig	exon	65776821	65777329	99	-	.	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 10897 11406 +
Chr1	stalkie_big_nohaplotig	exon	65777383	65777883	100	-	.	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 10396 10896 +
Chr1	stalkie_big_nohaplotig	exon	65778527	65778841	100	-	.	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 10081 10395 +
Chr1	stalkie_big_nohaplotig	exon	65778901	65779773	99	-	.	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 9208 10080 +
Chr1	stalkie_big_nohaplotig	exon	65780376	65780588	99	-	.	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 8995 9207 +
Chr1	stalkie_big_nohaplotig	exon	65780644	65784054	99	-	.	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 5584 8994 +
Chr1	stalkie_big_nohaplotig	exon	65784143	65784293	100	-	.	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 5433 5583 +
Chr1	stalkie_big_nohaplotig	exon	65786519	65786768	100	-	.	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 5183 5432 +
Chr1	stalkie_big_nohaplotig	exon	65786848	65787673	99	-	.	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 4357 5182 +
Chr1	stalkie_big_nohaplotig	exon	65788629	65789013	99	-	.	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 3972 4356 +
Chr1	stalkie_big_nohaplotig	exon	65789175	65789294	100	-	.	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 3852 3971 +
Chr1	stalkie_big_nohaplotig	exon	65789363	65789993	100	-	.	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 3221 3851 +
Chr1	stalkie_big_nohaplotig	exon	65790056	65790187	99	-	.	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 3089 3220 +
Chr1	stalkie_big_nohaplotig	exon	65790284	65790420	100	-	.	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 2952 3088 +
Chr1	stalkie_big_nohaplotig	exon	65791994	65792919	100	-	.	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 2026 2951 +
Chr1	stalkie_big_nohaplotig	exon	65792980	65794086	100	-	.	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 919 2025 +
Chr1	stalkie_big_nohaplotig	exon	65794164	65794951	99	-	.	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 131 918 +
Chr1	stalkie_big_nohaplotig	exon	65795129	65795258	100	-	.	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 1 130 +
Chr1	stalkie_big_nohaplotig	CDS	65776821	65777329	.	-	0	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 10897 11406 +
Chr1	stalkie_big_nohaplotig	CDS	65777383	65777883	.	-	0	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 10396 10896 +
Chr1	stalkie_big_nohaplotig	CDS	65778527	65778841	.	-	0	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 10081 10395 +
Chr1	stalkie_big_nohaplotig	CDS	65778901	65779773	.	-	0	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 9208 10080 +
Chr1	stalkie_big_nohaplotig	CDS	65780376	65780588	.	-	0	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 8995 9207 +
Chr1	stalkie_big_nohaplotig	CDS	65780644	65784054	.	-	0	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 5584 8994 +
Chr1	stalkie_big_nohaplotig	CDS	65784143	65784293	.	-	1	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 5433 5583 +
Chr1	stalkie_big_nohaplotig	CDS	65786519	65786768	.	-	2	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 5183 5432 +
Chr1	stalkie_big_nohaplotig	CDS	65786848	65787673	.	-	0	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 4357 5182 +
Chr1	stalkie_big_nohaplotig	CDS	65788629	65789013	.	-	1	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 3972 4356 +
Chr1	stalkie_big_nohaplotig	CDS	65789175	65789294	.	-	1	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 3852 3971 +
Chr1	stalkie_big_nohaplotig	CDS	65789363	65789993	.	-	2	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 3221 3851 +
Chr1	stalkie_big_nohaplotig	CDS	65790056	65790187	.	-	2	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 3089 3220 +
Chr1	stalkie_big_nohaplotig	CDS	65790284	65790420	.	-	1	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 2952 3088 +
Chr1	stalkie_big_nohaplotig	CDS	65791994	65792919	.	-	0	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 2026 2951 +
Chr1	stalkie_big_nohaplotig	CDS	65792980	65794086	.	-	0	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 919 2025 +
Chr1	stalkie_big_nohaplotig	CDS	65794164	65794951	.	-	2	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 131 918 +
Chr1	stalkie_big_nohaplotig	CDS	65795129	65795258	.	-	0	Parent=FBgn0052113.1.mrna1;Target=FBgn0052113.1 1 130 +
Chr1	gffcl	locus	65769611	65770643	.	-	.	ID=RLOC_00008602;geneIDs=FBgn0034065.2.path1;transcripts=FBgn0034065.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65769611	65770643	.	-	.	ID=FBgn0034065.2.mrna1;geneID=FBgn0034065.2.path1;Name=FBgn0034065.2;Dir=sensecoverage=99.8;identity=99.5;matches=828;mismatches=4;indels=0;unknowns=0;locus=RLOC_00008602
Chr1	stalkie_big_nohaplotig	exon	65769611	65769813	99	-	.	Parent=FBgn0034065.2.mrna1;Target=FBgn0034065.2 630 832 +
Chr1	stalkie_big_nohaplotig	exon	65769941	65770522	99	-	.	Parent=FBgn0034065.2.mrna1;Target=FBgn0034065.2 48 629 +
Chr1	stalkie_big_nohaplotig	exon	65770597	65770643	100	-	.	Parent=FBgn0034065.2.mrna1;Target=FBgn0034065.2 1 47 +
Chr1	stalkie_big_nohaplotig	CDS	65769612	65769813	.	-	1	Parent=FBgn0034065.2.mrna1;Target=FBgn0034065.2 630 831 +
Chr1	stalkie_big_nohaplotig	CDS	65769941	65770522	.	-	1	Parent=FBgn0034065.2.mrna1;Target=FBgn0034065.2 48 629 +
Chr1	stalkie_big_nohaplotig	CDS	65770597	65770643	.	-	0	Parent=FBgn0034065.2.mrna1;Target=FBgn0034065.2 1 47 +
Chr1	gffcl	locus	65796266	65800540	.	-	.	ID=RLOC_00008604;geneIDs=CPIJ011281.1.path1;transcripts=CPIJ011281.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65796266	65800540	.	-	.	ID=CPIJ011281.1.mrna1;geneID=CPIJ011281.1.path1;Name=CPIJ011281.1;Dir=sensecoverage=100.0;identity=99.9;matches=2002;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008604
Chr1	stalkie_big_nohaplotig	exon	65796266	65796499	100	-	.	Parent=CPIJ011281.1.mrna1;Target=CPIJ011281.1 1771 2004 +
Chr1	stalkie_big_nohaplotig	exon	65796559	65797113	99	-	.	Parent=CPIJ011281.1.mrna1;Target=CPIJ011281.1 1216 1770 +
Chr1	stalkie_big_nohaplotig	exon	65798835	65798906	100	-	.	Parent=CPIJ011281.1.mrna1;Target=CPIJ011281.1 1144 1215 +
Chr1	stalkie_big_nohaplotig	exon	65798967	65799182	100	-	.	Parent=CPIJ011281.1.mrna1;Target=CPIJ011281.1 928 1143 +
Chr1	stalkie_big_nohaplotig	exon	65799257	65799494	99	-	.	Parent=CPIJ011281.1.mrna1;Target=CPIJ011281.1 690 927 +
Chr1	stalkie_big_nohaplotig	exon	65799589	65799820	100	-	.	Parent=CPIJ011281.1.mrna1;Target=CPIJ011281.1 458 689 +
Chr1	stalkie_big_nohaplotig	exon	65799873	65800082	100	-	.	Parent=CPIJ011281.1.mrna1;Target=CPIJ011281.1 248 457 +
Chr1	stalkie_big_nohaplotig	exon	65800238	65800442	100	-	.	Parent=CPIJ011281.1.mrna1;Target=CPIJ011281.1 43 247 +
Chr1	stalkie_big_nohaplotig	exon	65800499	65800540	100	-	.	Parent=CPIJ011281.1.mrna1;Target=CPIJ011281.1 1 42 +
Chr1	stalkie_big_nohaplotig	CDS	65796266	65796499	.	-	0	Parent=CPIJ011281.1.mrna1;Target=CPIJ011281.1 1771 2004 +
Chr1	stalkie_big_nohaplotig	CDS	65796559	65797113	.	-	0	Parent=CPIJ011281.1.mrna1;Target=CPIJ011281.1 1216 1770 +
Chr1	stalkie_big_nohaplotig	CDS	65798835	65798906	.	-	0	Parent=CPIJ011281.1.mrna1;Target=CPIJ011281.1 1144 1215 +
Chr1	stalkie_big_nohaplotig	CDS	65798967	65799182	.	-	0	Parent=CPIJ011281.1.mrna1;Target=CPIJ011281.1 928 1143 +
Chr1	stalkie_big_nohaplotig	CDS	65799257	65799494	.	-	1	Parent=CPIJ011281.1.mrna1;Target=CPIJ011281.1 690 927 +
Chr1	stalkie_big_nohaplotig	CDS	65799589	65799820	.	-	2	Parent=CPIJ011281.1.mrna1;Target=CPIJ011281.1 458 689 +
Chr1	stalkie_big_nohaplotig	CDS	65799873	65800082	.	-	2	Parent=CPIJ011281.1.mrna1;Target=CPIJ011281.1 248 457 +
Chr1	stalkie_big_nohaplotig	CDS	65800238	65800442	.	-	0	Parent=CPIJ011281.1.mrna1;Target=CPIJ011281.1 43 247 +
Chr1	stalkie_big_nohaplotig	CDS	65800499	65800540	.	-	0	Parent=CPIJ011281.1.mrna1;Target=CPIJ011281.1 1 42 +
Chr1	gffcl	locus	65818725	65825395	.	+	.	ID=RLOC_00008606;geneIDs=FBgn0036927.1.path1,comp76904_c0_seq1.path1;transcripts=FBgn0036927.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65819156	65825395	.	+	.	ID=FBgn0036927.1.mrna1;geneID=FBgn0036927.1.path1;Name=FBgn0036927.1;Dir=sensecoverage=99.7;identity=99.3;matches=1499;mismatches=2;indels=8;unknowns=0;locus=RLOC_00008606
Chr1	stalkie_big_nohaplotig	exon	65819156	65819246	91	+	.	Parent=FBgn0036927.1.mrna1;Target=FBgn0036927.1 6 88 +
Chr1	stalkie_big_nohaplotig	exon	65819315	65819430	100	+	.	Parent=FBgn0036927.1.mrna1;Target=FBgn0036927.1 89 204 +
Chr1	stalkie_big_nohaplotig	exon	65822227	65822398	100	+	.	Parent=FBgn0036927.1.mrna1;Target=FBgn0036927.1 205 376 +
Chr1	stalkie_big_nohaplotig	exon	65822552	65822714	100	+	.	Parent=FBgn0036927.1.mrna1;Target=FBgn0036927.1 377 539 +
Chr1	stalkie_big_nohaplotig	exon	65824429	65825395	99	+	.	Parent=FBgn0036927.1.mrna1;Target=FBgn0036927.1 540 1506 +
Chr1	stalkie_big_nohaplotig	CDS	65819156	65819246	.	+	0	Parent=FBgn0036927.1.mrna1;Target=FBgn0036927.1 6 88 +
Chr1	stalkie_big_nohaplotig	CDS	65819315	65819345	.	+	2	Parent=FBgn0036927.1.mrna1;Target=FBgn0036927.1 89 119 +
Chr1	gffcl	locus	65819804	65820169	.	+	.	ID=RLOC_00008607;geneIDs=comp140001_c0_seq1.path1;transcripts=comp140001_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65819804	65820169	.	+	.	ID=comp140001_c0_seq1.mrna1;geneID=comp140001_c0_seq1.path1;Name=comp140001_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=359;mismatches=7;indels=0;unknowns=0;Target=comp140001_c0_seq1 366 1 .;CDS_Target=comp140001_c0_seq1 365 207 .;locus=RLOC_00008607
Chr1	stalkie_big_nohaplotig	exon	65819804	65820169	98	+	.	Parent=comp140001_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65820010	65820168	.	+	0	Parent=comp140001_c0_seq1.mrna1
Chr1	gffcl	locus	65821091	65822112	.	+	.	ID=RLOC_00008608;geneIDs=comp154460_c0_seq1.path1;transcripts=comp154460_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65821091	65822112	.	+	.	ID=comp154460_c0_seq1.mrna1;geneID=comp154460_c0_seq1.path1;Name=comp154460_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=925;mismatches=10;indels=1;unknowns=0;Target=comp154460_c0_seq1 34 2 .;locus=RLOC_00008608
Chr1	stalkie_big_nohaplotig	exon	65821091	65821591	98	+	.	Parent=comp154460_c0_seq1.mrna1;Target=comp154460_c0_seq1 500 1 .
Chr1	stalkie_big_nohaplotig	exon	65821678	65822112	99	+	.	Parent=comp154460_c0_seq1.mrna1;Target=comp154460_c0_seq1 951 517 .
Chr1	stalkie_big_nohaplotig	CDS	65821092	65821124	.	+	0	Parent=comp154460_c0_seq1.mrna1
Chr1	gffcl	locus	65829572	65834561	.	+	.	ID=RLOC_00008609;geneIDs=comp135506_c0_seq1.path1;transcripts=comp135506_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65829572	65834561	.	+	.	ID=comp135506_c0_seq1.mrna1;geneID=comp135506_c0_seq1.path1;Name=comp135506_c0_seq1;Dir=sensecoverage=98.0;identity=99.8;matches=974;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008609
Chr1	stalkie_big_nohaplotig	exon	65829572	65829672	100	+	.	Parent=comp135506_c0_seq1.mrna1;Target=comp135506_c0_seq1 1 101 +
Chr1	stalkie_big_nohaplotig	exon	65829721	65829801	100	+	.	Parent=comp135506_c0_seq1.mrna1;Target=comp135506_c0_seq1 102 182 +
Chr1	stalkie_big_nohaplotig	exon	65833495	65833623	100	+	.	Parent=comp135506_c0_seq1.mrna1;Target=comp135506_c0_seq1 183 311 +
Chr1	stalkie_big_nohaplotig	exon	65833709	65833863	100	+	.	Parent=comp135506_c0_seq1.mrna1;Target=comp135506_c0_seq1 312 466 +
Chr1	stalkie_big_nohaplotig	exon	65833923	65834083	99	+	.	Parent=comp135506_c0_seq1.mrna1;Target=comp135506_c0_seq1 467 627 +
Chr1	stalkie_big_nohaplotig	exon	65834213	65834561	99	+	.	Parent=comp135506_c0_seq1.mrna1;Target=comp135506_c0_seq1 628 976 +
Chr1	stalkie_big_nohaplotig	CDS	65833502	65833623	.	+	0	Parent=comp135506_c0_seq1.mrna1;Target=comp135506_c0_seq1 190 311 +
Chr1	stalkie_big_nohaplotig	CDS	65833709	65833863	.	+	1	Parent=comp135506_c0_seq1.mrna1;Target=comp135506_c0_seq1 312 466 +
Chr1	stalkie_big_nohaplotig	CDS	65833923	65834083	.	+	2	Parent=comp135506_c0_seq1.mrna1;Target=comp135506_c0_seq1 467 627 +
Chr1	stalkie_big_nohaplotig	CDS	65834213	65834464	.	+	0	Parent=comp135506_c0_seq1.mrna1;Target=comp135506_c0_seq1 628 879 +
Chr1	gffcl	locus	65830468	65831366	.	-	.	ID=RLOC_00008610;geneIDs=comp150940_c0_seq1.path1;transcripts=comp150940_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65830468	65831366	.	-	.	ID=comp150940_c0_seq1.mrna1;geneID=comp150940_c0_seq1.path1;Name=comp150940_c0_seq1;Dir=indeterminatecoverage=99.3;identity=98.9;matches=890;mismatches=9;indels=1;unknowns=0;Target=comp150940_c0_seq1 900 1 .;CDS_Target=comp150940_c0_seq1 589 449 .;locus=RLOC_00008610
Chr1	stalkie_big_nohaplotig	exon	65830468	65831366	98	-	.	Parent=comp150940_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65830778	65830918	.	-	0	Parent=comp150940_c0_seq1.mrna1
Chr1	gffcl	locus	65831406	65832229	.	-	.	ID=RLOC_00008611;geneIDs=comp152020_c0_seq1.path1;transcripts=comp152020_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65831406	65832229	.	-	.	ID=comp152020_c0_seq1.mrna1;geneID=comp152020_c0_seq1.path1;Name=comp152020_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=814;mismatches=9;indels=1;unknowns=0;Target=comp152020_c0_seq1 823 1 .;CDS_Target=comp152020_c0_seq1 191 99 .;locus=RLOC_00008611
Chr1	stalkie_big_nohaplotig	exon	65831406	65832229	98	-	.	Parent=comp152020_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65832039	65832131	.	-	0	Parent=comp152020_c0_seq1.mrna1
Chr1	gffcl	locus	65832578	65832990	.	+	.	ID=RLOC_00008612;geneIDs=comp140283_c0_seq1.path1;transcripts=comp140283_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65832578	65832990	.	+	.	ID=comp140283_c0_seq1.mrna1;geneID=comp140283_c0_seq1.path1;Name=comp140283_c0_seq1;Dir=indeterminatecoverage=91.2;identity=100.0;matches=413;mismatches=0;indels=0;unknowns=0;Target=comp140283_c0_seq1 453 41 .;CDS_Target=comp140283_c0_seq1 196 41 .;locus=RLOC_00008612
Chr1	stalkie_big_nohaplotig	exon	65832578	65832990	100	+	.	Parent=comp140283_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65832578	65832733	.	+	0	Parent=comp140283_c0_seq1.mrna1
Chr1	gffcl	locus	65835316	65836532	.	-	.	ID=RLOC_00008613;geneIDs=FBgn0005633.1.path1,comp143853_c0_seq1.path1;transcripts=FBgn0005633.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65835316	65836069	.	-	.	ID=FBgn0005633.1.mrna1;geneID=FBgn0005633.1.path1;Name=FBgn0005633.1;Dir=sensecoverage=100.0;identity=100.0;matches=546;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008613
Chr1	stalkie_big_nohaplotig	exon	65835316	65835448	100	-	.	Parent=FBgn0005633.1.mrna1;Target=FBgn0005633.1 414 546 +
Chr1	stalkie_big_nohaplotig	exon	65835591	65835746	100	-	.	Parent=FBgn0005633.1.mrna1;Target=FBgn0005633.1 258 413 +
Chr1	stalkie_big_nohaplotig	exon	65835813	65836069	100	-	.	Parent=FBgn0005633.1.mrna1;Target=FBgn0005633.1 1 257 +
Chr1	stalkie_big_nohaplotig	CDS	65835316	65835448	.	-	1	Parent=FBgn0005633.1.mrna1;Target=FBgn0005633.1 414 546 +
Chr1	stalkie_big_nohaplotig	CDS	65835591	65835746	.	-	1	Parent=FBgn0005633.1.mrna1;Target=FBgn0005633.1 258 413 +
Chr1	stalkie_big_nohaplotig	CDS	65835813	65836069	.	-	0	Parent=FBgn0005633.1.mrna1;Target=FBgn0005633.1 1 257 +
Chr1	gffcl	locus	65837215	65846888	.	+	.	ID=RLOC_00008614;geneIDs=FBgn0013303.1.path1,comp143709_c0_seq1.path1;transcripts=comp143709_c0_seq1.mrna1,FBgn0013303.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65837215	65844201	.	+	.	ID=comp143709_c0_seq1.mrna1;geneID=comp143709_c0_seq1.path1;Name=comp143709_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=278;mismatches=0;indels=0;unknowns=0;Target=comp143709_c0_seq1 3 38 +;locus=RLOC_00008614
Chr1	stalkie_big_nohaplotig	exon	65837215	65837470	100	+	.	Parent=comp143709_c0_seq1.mrna1;Target=comp143709_c0_seq1 1 256 +
Chr1	stalkie_big_nohaplotig	exon	65844180	65844201	100	+	.	Parent=comp143709_c0_seq1.mrna1;Target=comp143709_c0_seq1 257 278 +
Chr1	stalkie_big_nohaplotig	CDS	65837217	65837252	.	+	0	Parent=comp143709_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65844198	65846888	.	+	.	ID=FBgn0013303.1.mrna1;geneID=FBgn0013303.1.path1;Name=FBgn0013303.1;Dir=sensecoverage=100.0;identity=99.8;matches=575;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008614
Chr1	stalkie_big_nohaplotig	exon	65844198	65844273	100	+	.	Parent=FBgn0013303.1.mrna1;Target=FBgn0013303.1 1 76 +
Chr1	stalkie_big_nohaplotig	exon	65844556	65844674	100	+	.	Parent=FBgn0013303.1.mrna1;Target=FBgn0013303.1 77 195 +
Chr1	stalkie_big_nohaplotig	exon	65846453	65846641	99	+	.	Parent=FBgn0013303.1.mrna1;Target=FBgn0013303.1 196 384 +
Chr1	stalkie_big_nohaplotig	exon	65846697	65846888	100	+	.	Parent=FBgn0013303.1.mrna1;Target=FBgn0013303.1 385 576 +
Chr1	stalkie_big_nohaplotig	CDS	65844198	65844273	.	+	0	Parent=FBgn0013303.1.mrna1;Target=FBgn0013303.1 1 76 +
Chr1	stalkie_big_nohaplotig	CDS	65844556	65844674	.	+	2	Parent=FBgn0013303.1.mrna1;Target=FBgn0013303.1 77 195 +
Chr1	stalkie_big_nohaplotig	CDS	65846453	65846641	.	+	0	Parent=FBgn0013303.1.mrna1;Target=FBgn0013303.1 196 384 +
Chr1	stalkie_big_nohaplotig	CDS	65846697	65846888	.	+	0	Parent=FBgn0013303.1.mrna1;Target=FBgn0013303.1 385 576 +
Chr1	gffcl	locus	65837838	65838044	.	+	.	ID=RLOC_00008615;geneIDs=comp63798_c0_seq1.path1;transcripts=comp63798_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65837838	65838044	.	+	.	ID=comp63798_c0_seq1.mrna1;geneID=comp63798_c0_seq1.path1;Name=comp63798_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=207;mismatches=0;indels=0;unknowns=0;Target=comp63798_c0_seq1 207 1 .;CDS_Target=comp63798_c0_seq1 38 3 .;locus=RLOC_00008615
Chr1	stalkie_big_nohaplotig	exon	65837838	65838044	100	+	.	Parent=comp63798_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65837840	65837875	.	+	0	Parent=comp63798_c0_seq1.mrna1
Chr1	gffcl	locus	65838936	65839640	.	-	.	ID=RLOC_00008616;geneIDs=comp151428_c0_seq1.path1;transcripts=comp151428_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65838936	65839640	.	-	.	ID=comp151428_c0_seq1.mrna1;geneID=comp151428_c0_seq1.path1;Name=comp151428_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=693;mismatches=12;indels=0;unknowns=0;Target=comp151428_c0_seq1 705 1 .;CDS_Target=comp151428_c0_seq1 207 73 .;locus=RLOC_00008616
Chr1	stalkie_big_nohaplotig	exon	65838936	65839640	98	-	.	Parent=comp151428_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65839434	65839568	.	-	0	Parent=comp151428_c0_seq1.mrna1
Chr1	gffcl	locus	65840133	65840514	.	-	.	ID=RLOC_00008617;geneIDs=comp150468_c0_seq1.path1;transcripts=comp150468_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65840133	65840514	.	-	.	ID=comp150468_c0_seq1.mrna1;geneID=comp150468_c0_seq1.path1;Name=comp150468_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=381;mismatches=1;indels=0;unknowns=0;Target=comp150468_c0_seq1 382 1 .;CDS_Target=comp150468_c0_seq1 380 237 .;locus=RLOC_00008617
Chr1	stalkie_big_nohaplotig	exon	65840133	65840514	99	-	.	Parent=comp150468_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65840135	65840278	.	-	0	Parent=comp150468_c0_seq1.mrna1
Chr1	gffcl	locus	65842404	65843766	.	+	.	ID=RLOC_00008618;geneIDs=FBgn0036926.1.path1;transcripts=FBgn0036926.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65842404	65843766	.	+	.	ID=FBgn0036926.1.mrna1;geneID=FBgn0036926.1.path1;Name=FBgn0036926.1;Dir=sensecoverage=100.0;identity=99.7;matches=368;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008618
Chr1	stalkie_big_nohaplotig	exon	65842404	65842469	98	+	.	Parent=FBgn0036926.1.mrna1;Target=FBgn0036926.1 1 66 +
Chr1	stalkie_big_nohaplotig	exon	65843385	65843513	100	+	.	Parent=FBgn0036926.1.mrna1;Target=FBgn0036926.1 67 195 +
Chr1	stalkie_big_nohaplotig	exon	65843593	65843766	100	+	.	Parent=FBgn0036926.1.mrna1;Target=FBgn0036926.1 196 369 +
Chr1	stalkie_big_nohaplotig	CDS	65842404	65842469	.	+	0	Parent=FBgn0036926.1.mrna1;Target=FBgn0036926.1 1 66 +
Chr1	stalkie_big_nohaplotig	CDS	65843385	65843513	.	+	0	Parent=FBgn0036926.1.mrna1;Target=FBgn0036926.1 67 195 +
Chr1	stalkie_big_nohaplotig	CDS	65843593	65843766	.	+	0	Parent=FBgn0036926.1.mrna1;Target=FBgn0036926.1 196 369 +
Chr1	gffcl	locus	65847378	65849476	.	-	.	ID=RLOC_00008619;geneIDs=FBgn0036305.1.path1;transcripts=FBgn0036305.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65847378	65849476	.	-	.	ID=FBgn0036305.1.mrna1;geneID=FBgn0036305.1.path1;Name=FBgn0036305.1;Dir=sensecoverage=100.0;identity=99.9;matches=1958;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008619
Chr1	stalkie_big_nohaplotig	exon	65847378	65847554	100	-	.	Parent=FBgn0036305.1.mrna1;Target=FBgn0036305.1 1783 1959 +
Chr1	stalkie_big_nohaplotig	exon	65847616	65849270	99	-	.	Parent=FBgn0036305.1.mrna1;Target=FBgn0036305.1 128 1782 +
Chr1	stalkie_big_nohaplotig	exon	65849350	65849476	100	-	.	Parent=FBgn0036305.1.mrna1;Target=FBgn0036305.1 1 127 +
Chr1	stalkie_big_nohaplotig	CDS	65847378	65847554	.	-	0	Parent=FBgn0036305.1.mrna1;Target=FBgn0036305.1 1783 1959 +
Chr1	stalkie_big_nohaplotig	CDS	65847616	65849270	.	-	2	Parent=FBgn0036305.1.mrna1;Target=FBgn0036305.1 128 1782 +
Chr1	stalkie_big_nohaplotig	CDS	65849350	65849476	.	-	0	Parent=FBgn0036305.1.mrna1;Target=FBgn0036305.1 1 127 +
Chr1	gffcl	locus	65854013	65856765	.	+	.	ID=RLOC_00008620;geneIDs=comp154206_c2_seq1.path1;transcripts=comp154206_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65854013	65856765	.	+	.	ID=comp154206_c2_seq1.mrna1;geneID=comp154206_c2_seq1.path1;Name=comp154206_c2_seq1;Dir=indeterminatecoverage=97.1;identity=97.5;matches=1216;mismatches=25;indels=6;unknowns=0;locus=RLOC_00008620
Chr1	stalkie_big_nohaplotig	exon	65854013	65854352	100	+	.	Parent=comp154206_c2_seq1.mrna1;Target=comp154206_c2_seq1 377 38 .
Chr1	stalkie_big_nohaplotig	exon	65854405	65854696	99	+	.	Parent=comp154206_c2_seq1.mrna1;Target=comp154206_c2_seq1 669 378 .
Chr1	stalkie_big_nohaplotig	exon	65854747	65854946	100	+	.	Parent=comp154206_c2_seq1.mrna1;Target=comp154206_c2_seq1 869 670 .
Chr1	stalkie_big_nohaplotig	exon	65855003	65855222	100	+	.	Parent=comp154206_c2_seq1.mrna1;Target=comp154206_c2_seq1 1089 870 .
Chr1	stalkie_big_nohaplotig	exon	65856572	65856765	84	+	.	Parent=comp154206_c2_seq1.mrna1;Target=comp154206_c2_seq1 1279 1090 .
Chr1	stalkie_big_nohaplotig	CDS	65854943	65854946	.	+	0	Parent=comp154206_c2_seq1.mrna1;Target=comp154206_c2_seq1 869 866 .
Chr1	stalkie_big_nohaplotig	CDS	65855003	65855148	.	+	2	Parent=comp154206_c2_seq1.mrna1;Target=comp154206_c2_seq1 1015 870 .
Chr1	gffcl	locus	65854165	65855066	.	-	.	ID=RLOC_00008621;geneIDs=FBgn0052109.1.path1;transcripts=FBgn0052109.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65854165	65855066	.	-	.	ID=FBgn0052109.1.mrna1;geneID=FBgn0052109.1.path1;Name=FBgn0052109.1;Dir=sensecoverage=100.0;identity=99.9;matches=743;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008621
Chr1	stalkie_big_nohaplotig	exon	65854165	65854352	100	-	.	Parent=FBgn0052109.1.mrna1;Target=FBgn0052109.1 557 744 +
Chr1	stalkie_big_nohaplotig	exon	65854405	65854696	99	-	.	Parent=FBgn0052109.1.mrna1;Target=FBgn0052109.1 265 556 +
Chr1	stalkie_big_nohaplotig	exon	65854747	65854946	100	-	.	Parent=FBgn0052109.1.mrna1;Target=FBgn0052109.1 65 264 +
Chr1	stalkie_big_nohaplotig	exon	65855003	65855066	100	-	.	Parent=FBgn0052109.1.mrna1;Target=FBgn0052109.1 1 64 +
Chr1	stalkie_big_nohaplotig	CDS	65854165	65854352	.	-	2	Parent=FBgn0052109.1.mrna1;Target=FBgn0052109.1 557 744 +
Chr1	stalkie_big_nohaplotig	CDS	65854405	65854696	.	-	0	Parent=FBgn0052109.1.mrna1;Target=FBgn0052109.1 265 556 +
Chr1	stalkie_big_nohaplotig	CDS	65854747	65854946	.	-	2	Parent=FBgn0052109.1.mrna1;Target=FBgn0052109.1 65 264 +
Chr1	stalkie_big_nohaplotig	CDS	65855003	65855066	.	-	0	Parent=FBgn0052109.1.mrna1;Target=FBgn0052109.1 1 64 +
Chr1	gffcl	locus	65857100	65859451	.	+	.	ID=RLOC_00008622;geneIDs=FBgn0039172.1.path1;transcripts=FBgn0039172.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65857100	65859451	.	+	.	ID=FBgn0039172.1.mrna1;geneID=FBgn0039172.1.path1;Name=FBgn0039172.1;Dir=sensecoverage=100.0;identity=100.0;matches=546;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008622
Chr1	stalkie_big_nohaplotig	exon	65857100	65857251	100	+	.	Parent=FBgn0039172.1.mrna1;Target=FBgn0039172.1 1 152 +
Chr1	stalkie_big_nohaplotig	exon	65857312	65857578	100	+	.	Parent=FBgn0039172.1.mrna1;Target=FBgn0039172.1 153 419 +
Chr1	stalkie_big_nohaplotig	exon	65859325	65859451	100	+	.	Parent=FBgn0039172.1.mrna1;Target=FBgn0039172.1 420 546 +
Chr1	stalkie_big_nohaplotig	CDS	65857100	65857251	.	+	0	Parent=FBgn0039172.1.mrna1;Target=FBgn0039172.1 1 152 +
Chr1	stalkie_big_nohaplotig	CDS	65857312	65857578	.	+	1	Parent=FBgn0039172.1.mrna1;Target=FBgn0039172.1 153 419 +
Chr1	stalkie_big_nohaplotig	CDS	65859325	65859451	.	+	1	Parent=FBgn0039172.1.mrna1;Target=FBgn0039172.1 420 546 +
Chr1	gffcl	locus	65859989	65866206	.	-	.	ID=RLOC_00008623;geneIDs=FBgn0014007.1.path1;transcripts=FBgn0014007.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65859989	65866206	.	-	.	ID=FBgn0014007.1.mrna1;geneID=FBgn0014007.1.path1;Name=FBgn0014007.1;Dir=sensecoverage=100.0;identity=99.8;matches=4499;mismatches=7;indels=0;unknowns=0;locus=RLOC_00008623
Chr1	stalkie_big_nohaplotig	exon	65859989	65860069	100	-	.	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 4426 4506 +
Chr1	stalkie_big_nohaplotig	exon	65860128	65860263	100	-	.	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 4290 4425 +
Chr1	stalkie_big_nohaplotig	exon	65860338	65860645	100	-	.	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 3982 4289 +
Chr1	stalkie_big_nohaplotig	exon	65860781	65860960	100	-	.	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 3802 3981 +
Chr1	stalkie_big_nohaplotig	exon	65861023	65861133	100	-	.	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 3691 3801 +
Chr1	stalkie_big_nohaplotig	exon	65861192	65861344	100	-	.	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 3538 3690 +
Chr1	stalkie_big_nohaplotig	exon	65861403	65862297	99	-	.	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 2643 3537 +
Chr1	stalkie_big_nohaplotig	exon	65862588	65862831	100	-	.	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 2399 2642 +
Chr1	stalkie_big_nohaplotig	exon	65862893	65863159	100	-	.	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 2132 2398 +
Chr1	stalkie_big_nohaplotig	exon	65863216	65865080	99	-	.	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 267 2131 +
Chr1	stalkie_big_nohaplotig	exon	65865205	65865313	99	-	.	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 158 266 +
Chr1	stalkie_big_nohaplotig	exon	65866050	65866206	100	-	.	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 1 157 +
Chr1	stalkie_big_nohaplotig	CDS	65859989	65860069	.	-	0	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 4426 4506 +
Chr1	stalkie_big_nohaplotig	CDS	65860128	65860263	.	-	1	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 4290 4425 +
Chr1	stalkie_big_nohaplotig	CDS	65860338	65860645	.	-	0	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 3982 4289 +
Chr1	stalkie_big_nohaplotig	CDS	65860781	65860960	.	-	0	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 3802 3981 +
Chr1	stalkie_big_nohaplotig	CDS	65861023	65861133	.	-	0	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 3691 3801 +
Chr1	stalkie_big_nohaplotig	CDS	65861192	65861344	.	-	0	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 3538 3690 +
Chr1	stalkie_big_nohaplotig	CDS	65861403	65862297	.	-	1	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 2643 3537 +
Chr1	stalkie_big_nohaplotig	CDS	65862588	65862831	.	-	2	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 2399 2642 +
Chr1	stalkie_big_nohaplotig	CDS	65862893	65863159	.	-	2	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 2132 2398 +
Chr1	stalkie_big_nohaplotig	CDS	65863216	65865080	.	-	1	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 267 2131 +
Chr1	stalkie_big_nohaplotig	CDS	65865205	65865313	.	-	2	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 158 266 +
Chr1	stalkie_big_nohaplotig	CDS	65866050	65866206	.	-	0	Parent=FBgn0014007.1.mrna1;Target=FBgn0014007.1 1 157 +
Chr1	gffcl	locus	65872394	65873521	.	+	.	ID=RLOC_00008625;geneIDs=FBgn0052220.1.path1;transcripts=FBgn0052220.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65872394	65873521	.	+	.	ID=FBgn0052220.1.mrna1;geneID=FBgn0052220.1.path1;Name=FBgn0052220.1;Dir=sensecoverage=100.0;identity=99.6;matches=723;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008625
Chr1	stalkie_big_nohaplotig	exon	65872394	65872464	100	+	.	Parent=FBgn0052220.1.mrna1;Target=FBgn0052220.1 1 71 +
Chr1	stalkie_big_nohaplotig	exon	65872532	65872722	99	+	.	Parent=FBgn0052220.1.mrna1;Target=FBgn0052220.1 72 262 +
Chr1	stalkie_big_nohaplotig	exon	65872917	65873121	99	+	.	Parent=FBgn0052220.1.mrna1;Target=FBgn0052220.1 263 467 +
Chr1	stalkie_big_nohaplotig	exon	65873195	65873362	100	+	.	Parent=FBgn0052220.1.mrna1;Target=FBgn0052220.1 468 635 +
Chr1	stalkie_big_nohaplotig	exon	65873431	65873521	100	+	.	Parent=FBgn0052220.1.mrna1;Target=FBgn0052220.1 636 726 +
Chr1	stalkie_big_nohaplotig	CDS	65872394	65872464	.	+	0	Parent=FBgn0052220.1.mrna1;Target=FBgn0052220.1 1 71 +
Chr1	stalkie_big_nohaplotig	CDS	65872532	65872722	.	+	1	Parent=FBgn0052220.1.mrna1;Target=FBgn0052220.1 72 262 +
Chr1	stalkie_big_nohaplotig	CDS	65872917	65873121	.	+	2	Parent=FBgn0052220.1.mrna1;Target=FBgn0052220.1 263 467 +
Chr1	stalkie_big_nohaplotig	CDS	65873195	65873362	.	+	1	Parent=FBgn0052220.1.mrna1;Target=FBgn0052220.1 468 635 +
Chr1	stalkie_big_nohaplotig	CDS	65873431	65873521	.	+	1	Parent=FBgn0052220.1.mrna1;Target=FBgn0052220.1 636 726 +
Chr1	gffcl	locus	65883984	65887641	.	+	.	ID=RLOC_00008626;geneIDs=FBgn0014163.1.path1;transcripts=FBgn0014163.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65883984	65887641	.	+	.	ID=FBgn0014163.1.mrna1;geneID=FBgn0014163.1.path1;Name=FBgn0014163.1;Dir=sensecoverage=100.0;identity=100.0;matches=1209;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008626
Chr1	stalkie_big_nohaplotig	exon	65883984	65884361	100	+	.	Parent=FBgn0014163.1.mrna1;Target=FBgn0014163.1 1 378 +
Chr1	stalkie_big_nohaplotig	exon	65886153	65886491	100	+	.	Parent=FBgn0014163.1.mrna1;Target=FBgn0014163.1 379 717 +
Chr1	stalkie_big_nohaplotig	exon	65886894	65887237	100	+	.	Parent=FBgn0014163.1.mrna1;Target=FBgn0014163.1 718 1061 +
Chr1	stalkie_big_nohaplotig	exon	65887291	65887387	100	+	.	Parent=FBgn0014163.1.mrna1;Target=FBgn0014163.1 1062 1158 +
Chr1	stalkie_big_nohaplotig	exon	65887591	65887641	100	+	.	Parent=FBgn0014163.1.mrna1;Target=FBgn0014163.1 1159 1209 +
Chr1	stalkie_big_nohaplotig	CDS	65883984	65884361	.	+	0	Parent=FBgn0014163.1.mrna1;Target=FBgn0014163.1 1 378 +
Chr1	stalkie_big_nohaplotig	CDS	65886153	65886491	.	+	0	Parent=FBgn0014163.1.mrna1;Target=FBgn0014163.1 379 717 +
Chr1	stalkie_big_nohaplotig	CDS	65886894	65887237	.	+	0	Parent=FBgn0014163.1.mrna1;Target=FBgn0014163.1 718 1061 +
Chr1	stalkie_big_nohaplotig	CDS	65887291	65887387	.	+	1	Parent=FBgn0014163.1.mrna1;Target=FBgn0014163.1 1062 1158 +
Chr1	stalkie_big_nohaplotig	CDS	65887591	65887641	.	+	0	Parent=FBgn0014163.1.mrna1;Target=FBgn0014163.1 1159 1209 +
Chr1	gffcl	locus	65894562	65898219	.	+	.	ID=RLOC_00008627;geneIDs=FBgn0014163.1.path2,comp149335_c0_seq1.path1;transcripts=FBgn0014163.1.mrna2,comp149335_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65894562	65898219	.	+	.	ID=FBgn0014163.1.mrna2;geneID=FBgn0014163.1.path2;Name=FBgn0014163.1;Dir=sensecoverage=100.0;identity=100.0;matches=1209;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008627
Chr1	stalkie_big_nohaplotig	exon	65894562	65894939	100	+	.	Parent=FBgn0014163.1.mrna2;Target=FBgn0014163.1 1 378 +
Chr1	stalkie_big_nohaplotig	exon	65896731	65897069	100	+	.	Parent=FBgn0014163.1.mrna2;Target=FBgn0014163.1 379 717 +
Chr1	stalkie_big_nohaplotig	exon	65897472	65897815	100	+	.	Parent=FBgn0014163.1.mrna2;Target=FBgn0014163.1 718 1061 +
Chr1	stalkie_big_nohaplotig	exon	65897869	65897965	100	+	.	Parent=FBgn0014163.1.mrna2;Target=FBgn0014163.1 1062 1158 +
Chr1	stalkie_big_nohaplotig	exon	65898169	65898219	100	+	.	Parent=FBgn0014163.1.mrna2;Target=FBgn0014163.1 1159 1209 +
Chr1	stalkie_big_nohaplotig	CDS	65894562	65894939	.	+	0	Parent=FBgn0014163.1.mrna2;Target=FBgn0014163.1 1 378 +
Chr1	stalkie_big_nohaplotig	CDS	65896731	65897069	.	+	0	Parent=FBgn0014163.1.mrna2;Target=FBgn0014163.1 379 717 +
Chr1	stalkie_big_nohaplotig	CDS	65897472	65897815	.	+	0	Parent=FBgn0014163.1.mrna2;Target=FBgn0014163.1 718 1061 +
Chr1	stalkie_big_nohaplotig	CDS	65897869	65897965	.	+	1	Parent=FBgn0014163.1.mrna2;Target=FBgn0014163.1 1062 1158 +
Chr1	stalkie_big_nohaplotig	CDS	65898169	65898219	.	+	0	Parent=FBgn0014163.1.mrna2;Target=FBgn0014163.1 1159 1209 +
Chr1	stalkie_big_nohaplotig	mRNA	65895873	65896754	.	+	.	ID=comp149335_c0_seq1.mrna1;geneID=comp149335_c0_seq1.path1;Name=comp149335_c0_seq1;Dir=antisensecoverage=92.9;identity=99.6;matches=673;mismatches=2;indels=1;unknowns=0;Target=comp149335_c0_seq1 526 675 .;locus=RLOC_00008627
Chr1	stalkie_big_nohaplotig	exon	65895873	65896523	99	+	.	Parent=comp149335_c0_seq1.mrna1;Target=comp149335_c0_seq1 25 676 -
Chr1	stalkie_big_nohaplotig	exon	65896731	65896754	100	+	.	Parent=comp149335_c0_seq1.mrna1;Target=comp149335_c0_seq1 1 24 -
Chr1	stalkie_big_nohaplotig	CDS	65895874	65896023	.	+	0	Parent=comp149335_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65929008	66444703	.	-	.	ID=comp161423_c2_seq1.mrna1;geneID=comp161423_c2_seq1.path1;Name=comp161423_c2_seq1;Dir=indeterminatecoverage=68.3;identity=95.6;matches=775;mismatches=19;indels=17;unknowns=0;Target=comp161423_c2_seq1 755 749 .;locus=RLOC_00008628
Chr1	stalkie_big_nohaplotig	exon	65929008	65929445	98	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 1518 1081 .
Chr1	stalkie_big_nohaplotig	exon	65932395	65932397	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 1080 1078 .
Chr1	stalkie_big_nohaplotig	exon	65936938	65936946	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 1075 1067 .
Chr1	stalkie_big_nohaplotig	exon	65943759	65943763	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 1066 1062 .
Chr1	stalkie_big_nohaplotig	exon	65946145	65946148	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 1061 1058 .
Chr1	stalkie_big_nohaplotig	exon	65957673	65957675	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 1057 1055 .
Chr1	stalkie_big_nohaplotig	exon	65988716	65988721	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 1054 1049 .
Chr1	stalkie_big_nohaplotig	exon	66001166	66001170	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 1048 1044 .
Chr1	stalkie_big_nohaplotig	exon	66007601	66007603	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 1043 1041 .
Chr1	stalkie_big_nohaplotig	exon	66011612	66011617	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 1040 1035 .
Chr1	stalkie_big_nohaplotig	exon	66016738	66016751	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 1027 1014 .
Chr1	stalkie_big_nohaplotig	exon	66016795	66016806	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 1012 1001 .
Chr1	stalkie_big_nohaplotig	exon	66030038	66030043	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 1000 995 .
Chr1	stalkie_big_nohaplotig	exon	66051773	66051776	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 994 991 .
Chr1	stalkie_big_nohaplotig	exon	66067304	66067307	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 990 987 .
Chr1	stalkie_big_nohaplotig	exon	66067341	66067352	83	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 960 950 .
Chr1	stalkie_big_nohaplotig	exon	66084127	66084137	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 900 890 .
Chr1	stalkie_big_nohaplotig	exon	66084166	66084173	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 860 853 .
Chr1	stalkie_big_nohaplotig	exon	66086091	66086092	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 852 851 .
Chr1	stalkie_big_nohaplotig	exon	66086944	66086947	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 850 847 .
Chr1	stalkie_big_nohaplotig	exon	66090388	66090397	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 846 837 .
Chr1	stalkie_big_nohaplotig	exon	66090414	66090425	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 828 817 .
Chr1	stalkie_big_nohaplotig	exon	66102448	66102449	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 816 815 .
Chr1	stalkie_big_nohaplotig	exon	66115894	66115895	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 814 813 .
Chr1	stalkie_big_nohaplotig	exon	66115897	66115907	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 755 745 .
Chr1	stalkie_big_nohaplotig	exon	66118797	66118801	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 744 740 .
Chr1	stalkie_big_nohaplotig	exon	66125626	66125627	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 739 738 .
Chr1	stalkie_big_nohaplotig	exon	66126478	66126481	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 737 734 .
Chr1	stalkie_big_nohaplotig	exon	66132710	66132711	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 733 732 .
Chr1	stalkie_big_nohaplotig	exon	66133755	66133758	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 731 728 .
Chr1	stalkie_big_nohaplotig	exon	66139055	66139064	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 727 718 .
Chr1	stalkie_big_nohaplotig	exon	66151321	66151323	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 717 715 .
Chr1	stalkie_big_nohaplotig	exon	66165374	66165378	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 714 710 .
Chr1	stalkie_big_nohaplotig	exon	66180197	66180204	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 709 702 .
Chr1	stalkie_big_nohaplotig	exon	66330070	66330091	79	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 701 679 .
Chr1	stalkie_big_nohaplotig	exon	66354669	66354707	54	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 678 631 .
Chr1	stalkie_big_nohaplotig	exon	66359041	66359052	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 517 506 .
Chr1	stalkie_big_nohaplotig	exon	66367045	66367047	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 505 503 .
Chr1	stalkie_big_nohaplotig	exon	66369860	66369865	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 502 497 .
Chr1	stalkie_big_nohaplotig	exon	66371495	66371499	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 496 492 .
Chr1	stalkie_big_nohaplotig	exon	66374160	66374169	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 487 478 .
Chr1	stalkie_big_nohaplotig	exon	66377558	66377562	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 477 473 .
Chr1	stalkie_big_nohaplotig	exon	66378175	66378182	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 472 465 .
Chr1	stalkie_big_nohaplotig	exon	66390504	66390508	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 463 459 .
Chr1	stalkie_big_nohaplotig	exon	66393414	66393416	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 458 456 .
Chr1	stalkie_big_nohaplotig	exon	66398375	66398378	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 455 452 .
Chr1	stalkie_big_nohaplotig	exon	66401449	66401453	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 451 447 .
Chr1	stalkie_big_nohaplotig	exon	66409186	66409188	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 446 444 .
Chr1	stalkie_big_nohaplotig	exon	66409204	66409211	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 432 425 .
Chr1	stalkie_big_nohaplotig	exon	66409431	66409438	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 424 417 .
Chr1	stalkie_big_nohaplotig	exon	66416401	66416406	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 416 411 .
Chr1	stalkie_big_nohaplotig	exon	66444698	66444703	100	-	.	Parent=comp161423_c2_seq1.mrna1;Target=comp161423_c2_seq1 410 405 .
Chr1	stalkie_big_nohaplotig	CDS	66115897	66115903	.	-	0	Parent=comp161423_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65948643	65962464	.	-	.	ID=comp161367_c1_seq1.mrna1;geneID=comp161367_c1_seq1.path1;Name=comp161367_c1_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=8841;mismatches=3;indels=1;unknowns=0;locus=RLOC_00008628
Chr1	stalkie_big_nohaplotig	exon	65948643	65949317	99	-	.	Parent=comp161367_c1_seq1.mrna1;Target=comp161367_c1_seq1 1 676 -
Chr1	stalkie_big_nohaplotig	exon	65949389	65949473	100	-	.	Parent=comp161367_c1_seq1.mrna1;Target=comp161367_c1_seq1 677 761 -
Chr1	stalkie_big_nohaplotig	exon	65950429	65950792	100	-	.	Parent=comp161367_c1_seq1.mrna1;Target=comp161367_c1_seq1 762 1125 -
Chr1	stalkie_big_nohaplotig	exon	65950853	65950984	100	-	.	Parent=comp161367_c1_seq1.mrna1;Target=comp161367_c1_seq1 1126 1257 -
Chr1	stalkie_big_nohaplotig	exon	65951047	65951234	100	-	.	Parent=comp161367_c1_seq1.mrna1;Target=comp161367_c1_seq1 1259 1446 -
Chr1	stalkie_big_nohaplotig	exon	65951349	65951629	100	-	.	Parent=comp161367_c1_seq1.mrna1;Target=comp161367_c1_seq1 1447 1727 -
Chr1	stalkie_big_nohaplotig	exon	65951702	65951882	100	-	.	Parent=comp161367_c1_seq1.mrna1;Target=comp161367_c1_seq1 1728 1908 -
Chr1	stalkie_big_nohaplotig	exon	65951992	65952033	100	-	.	Parent=comp161367_c1_seq1.mrna1;Target=comp161367_c1_seq1 1909 1950 -
Chr1	stalkie_big_nohaplotig	exon	65953800	65953930	100	-	.	Parent=comp161367_c1_seq1.mrna1;Target=comp161367_c1_seq1 1951 2081 -
Chr1	stalkie_big_nohaplotig	exon	65954385	65955827	100	-	.	Parent=comp161367_c1_seq1.mrna1;Target=comp161367_c1_seq1 2082 3524 -
Chr1	stalkie_big_nohaplotig	exon	65955886	65956176	99	-	.	Parent=comp161367_c1_seq1.mrna1;Target=comp161367_c1_seq1 3525 3815 -
Chr1	stalkie_big_nohaplotig	exon	65956242	65956601	100	-	.	Parent=comp161367_c1_seq1.mrna1;Target=comp161367_c1_seq1 3816 4175 -
Chr1	stalkie_big_nohaplotig	exon	65956663	65960535	100	-	.	Parent=comp161367_c1_seq1.mrna1;Target=comp161367_c1_seq1 4176 8048 -
Chr1	stalkie_big_nohaplotig	exon	65961667	65962464	99	-	.	Parent=comp161367_c1_seq1.mrna1;Target=comp161367_c1_seq1 8049 8846 -
Chr1	stalkie_big_nohaplotig	CDS	65952007	65952033	.	-	0	Parent=comp161367_c1_seq1.mrna1;Target=comp161367_c1_seq1 1924 1950 .
Chr1	stalkie_big_nohaplotig	CDS	65953800	65953930	.	-	2	Parent=comp161367_c1_seq1.mrna1;Target=comp161367_c1_seq1 1951 2081 .
Chr1	stalkie_big_nohaplotig	CDS	65954385	65955827	.	-	2	Parent=comp161367_c1_seq1.mrna1;Target=comp161367_c1_seq1 2082 3524 .
Chr1	stalkie_big_nohaplotig	CDS	65955886	65956176	.	-	2	Parent=comp161367_c1_seq1.mrna1;Target=comp161367_c1_seq1 3525 3815 .
Chr1	stalkie_big_nohaplotig	CDS	65956242	65956601	.	-	2	Parent=comp161367_c1_seq1.mrna1;Target=comp161367_c1_seq1 3816 4175 .
Chr1	stalkie_big_nohaplotig	CDS	65956663	65960535	.	-	2	Parent=comp161367_c1_seq1.mrna1;Target=comp161367_c1_seq1 4176 8048 .
Chr1	stalkie_big_nohaplotig	CDS	65961667	65961940	.	-	0	Parent=comp161367_c1_seq1.mrna1;Target=comp161367_c1_seq1 8049 8322 .
Chr1	stalkie_big_nohaplotig	mRNA	65951047	65961982	.	-	.	ID=FBgn0000541.1.mrna1;geneID=FBgn0000541.1.path1;Name=FBgn0000541.1;Dir=sensecoverage=99.8;identity=100.0;matches=7063;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008628
Chr1	stalkie_big_nohaplotig	exon	65951047	65951234	100	-	.	Parent=FBgn0000541.1.mrna1;Target=FBgn0000541.1 6877 7064 +
Chr1	stalkie_big_nohaplotig	exon	65951349	65951629	100	-	.	Parent=FBgn0000541.1.mrna1;Target=FBgn0000541.1 6596 6876 +
Chr1	stalkie_big_nohaplotig	exon	65951702	65951882	100	-	.	Parent=FBgn0000541.1.mrna1;Target=FBgn0000541.1 6415 6595 +
Chr1	stalkie_big_nohaplotig	exon	65953800	65953930	100	-	.	Parent=FBgn0000541.1.mrna1;Target=FBgn0000541.1 6284 6414 +
Chr1	stalkie_big_nohaplotig	exon	65954385	65955827	100	-	.	Parent=FBgn0000541.1.mrna1;Target=FBgn0000541.1 4841 6283 +
Chr1	stalkie_big_nohaplotig	exon	65955886	65956176	99	-	.	Parent=FBgn0000541.1.mrna1;Target=FBgn0000541.1 4550 4840 +
Chr1	stalkie_big_nohaplotig	exon	65956242	65956601	100	-	.	Parent=FBgn0000541.1.mrna1;Target=FBgn0000541.1 4190 4549 +
Chr1	stalkie_big_nohaplotig	exon	65956663	65960535	100	-	.	Parent=FBgn0000541.1.mrna1;Target=FBgn0000541.1 317 4189 +
Chr1	stalkie_big_nohaplotig	exon	65961667	65961982	100	-	.	Parent=FBgn0000541.1.mrna1;Target=FBgn0000541.1 1 316 +
Chr1	stalkie_big_nohaplotig	CDS	65951049	65951234	.	-	0	Parent=FBgn0000541.1.mrna1;Target=FBgn0000541.1 6877 7062 +
Chr1	stalkie_big_nohaplotig	CDS	65951349	65951629	.	-	2	Parent=FBgn0000541.1.mrna1;Target=FBgn0000541.1 6596 6876 +
Chr1	stalkie_big_nohaplotig	CDS	65951702	65951882	.	-	0	Parent=FBgn0000541.1.mrna1;Target=FBgn0000541.1 6415 6595 +
Chr1	stalkie_big_nohaplotig	CDS	65953800	65953930	.	-	2	Parent=FBgn0000541.1.mrna1;Target=FBgn0000541.1 6284 6414 +
Chr1	stalkie_big_nohaplotig	CDS	65954385	65955827	.	-	2	Parent=FBgn0000541.1.mrna1;Target=FBgn0000541.1 4841 6283 +
Chr1	stalkie_big_nohaplotig	CDS	65955886	65956176	.	-	2	Parent=FBgn0000541.1.mrna1;Target=FBgn0000541.1 4550 4840 +
Chr1	stalkie_big_nohaplotig	CDS	65956242	65956601	.	-	2	Parent=FBgn0000541.1.mrna1;Target=FBgn0000541.1 4190 4549 +
Chr1	stalkie_big_nohaplotig	CDS	65956663	65960535	.	-	2	Parent=FBgn0000541.1.mrna1;Target=FBgn0000541.1 317 4189 +
Chr1	stalkie_big_nohaplotig	CDS	65961667	65961982	.	-	0	Parent=FBgn0000541.1.mrna1;Target=FBgn0000541.1 1 316 +
Chr1	stalkie_big_nohaplotig	mRNA	66005043	66052410	.	-	.	ID=FBgn0026179.1.mrna1;geneID=FBgn0026179.1.path1;Name=FBgn0026179.1;Dir=sensecoverage=100.0;identity=99.9;matches=3955;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008628
Chr1	stalkie_big_nohaplotig	exon	66005043	66005482	100	-	.	Parent=FBgn0026179.1.mrna1;Target=FBgn0026179.1 3518 3957 +
Chr1	stalkie_big_nohaplotig	exon	66005540	66006371	100	-	.	Parent=FBgn0026179.1.mrna1;Target=FBgn0026179.1 2686 3517 +
Chr1	stalkie_big_nohaplotig	exon	66006493	66007727	99	-	.	Parent=FBgn0026179.1.mrna1;Target=FBgn0026179.1 1451 2685 +
Chr1	stalkie_big_nohaplotig	exon	66007790	66008256	100	-	.	Parent=FBgn0026179.1.mrna1;Target=FBgn0026179.1 984 1450 +
Chr1	stalkie_big_nohaplotig	exon	66009969	66010176	100	-	.	Parent=FBgn0026179.1.mrna1;Target=FBgn0026179.1 776 983 +
Chr1	stalkie_big_nohaplotig	exon	66010236	66010513	100	-	.	Parent=FBgn0026179.1.mrna1;Target=FBgn0026179.1 498 775 +
Chr1	stalkie_big_nohaplotig	exon	66051914	66052410	99	-	.	Parent=FBgn0026179.1.mrna1;Target=FBgn0026179.1 1 497 +
Chr1	stalkie_big_nohaplotig	CDS	66005043	66005482	.	-	2	Parent=FBgn0026179.1.mrna1;Target=FBgn0026179.1 3518 3957 +
Chr1	stalkie_big_nohaplotig	CDS	66005540	66006371	.	-	0	Parent=FBgn0026179.1.mrna1;Target=FBgn0026179.1 2686 3517 +
Chr1	stalkie_big_nohaplotig	CDS	66006493	66007727	.	-	2	Parent=FBgn0026179.1.mrna1;Target=FBgn0026179.1 1451 2685 +
Chr1	stalkie_big_nohaplotig	CDS	66007790	66008256	.	-	1	Parent=FBgn0026179.1.mrna1;Target=FBgn0026179.1 984 1450 +
Chr1	stalkie_big_nohaplotig	CDS	66009969	66010176	.	-	2	Parent=FBgn0026179.1.mrna1;Target=FBgn0026179.1 776 983 +
Chr1	stalkie_big_nohaplotig	CDS	66010236	66010513	.	-	1	Parent=FBgn0026179.1.mrna1;Target=FBgn0026179.1 498 775 +
Chr1	stalkie_big_nohaplotig	CDS	66051914	66052410	.	-	0	Parent=FBgn0026179.1.mrna1;Target=FBgn0026179.1 1 497 +
Chr1	gffcl	locus	65929923	65931583	.	+	.	ID=RLOC_00008630;geneIDs=FBgn0037050.1.path1;transcripts=FBgn0037050.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65929923	65931583	.	+	.	ID=FBgn0037050.1.mrna1;geneID=FBgn0037050.1.path1;Name=FBgn0037050.1;Dir=sensecoverage=100.0;identity=99.9;matches=1295;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008630
Chr1	stalkie_big_nohaplotig	exon	65929923	65929965	100	+	.	Parent=FBgn0037050.1.mrna1;Target=FBgn0037050.1 1 43 +
Chr1	stalkie_big_nohaplotig	exon	65930091	65930704	99	+	.	Parent=FBgn0037050.1.mrna1;Target=FBgn0037050.1 44 657 +
Chr1	stalkie_big_nohaplotig	exon	65930807	65930854	100	+	.	Parent=FBgn0037050.1.mrna1;Target=FBgn0037050.1 658 705 +
Chr1	stalkie_big_nohaplotig	exon	65930920	65931120	100	+	.	Parent=FBgn0037050.1.mrna1;Target=FBgn0037050.1 706 906 +
Chr1	stalkie_big_nohaplotig	exon	65931194	65931583	100	+	.	Parent=FBgn0037050.1.mrna1;Target=FBgn0037050.1 907 1296 +
Chr1	stalkie_big_nohaplotig	CDS	65929923	65929965	.	+	0	Parent=FBgn0037050.1.mrna1;Target=FBgn0037050.1 1 43 +
Chr1	stalkie_big_nohaplotig	CDS	65930091	65930704	.	+	2	Parent=FBgn0037050.1.mrna1;Target=FBgn0037050.1 44 657 +
Chr1	stalkie_big_nohaplotig	CDS	65930807	65930854	.	+	0	Parent=FBgn0037050.1.mrna1;Target=FBgn0037050.1 658 705 +
Chr1	stalkie_big_nohaplotig	CDS	65930920	65931120	.	+	0	Parent=FBgn0037050.1.mrna1;Target=FBgn0037050.1 706 906 +
Chr1	stalkie_big_nohaplotig	CDS	65931194	65931583	.	+	0	Parent=FBgn0037050.1.mrna1;Target=FBgn0037050.1 907 1296 +
Chr1	gffcl	locus	65941578	65944320	.	+	.	ID=RLOC_00008631;geneIDs=comp156551_c0_seq1.path1;transcripts=comp156551_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65941578	65944320	.	+	.	ID=comp156551_c0_seq1.mrna1;geneID=comp156551_c0_seq1.path1;Name=comp156551_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=2385;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008631
Chr1	stalkie_big_nohaplotig	exon	65941578	65942066	99	+	.	Parent=comp156551_c0_seq1.mrna1;Target=comp156551_c0_seq1 1 489 +
Chr1	stalkie_big_nohaplotig	exon	65942124	65942535	99	+	.	Parent=comp156551_c0_seq1.mrna1;Target=comp156551_c0_seq1 490 901 +
Chr1	stalkie_big_nohaplotig	exon	65942599	65943176	100	+	.	Parent=comp156551_c0_seq1.mrna1;Target=comp156551_c0_seq1 902 1479 +
Chr1	stalkie_big_nohaplotig	exon	65943247	65943511	100	+	.	Parent=comp156551_c0_seq1.mrna1;Target=comp156551_c0_seq1 1480 1744 +
Chr1	stalkie_big_nohaplotig	exon	65943571	65943828	100	+	.	Parent=comp156551_c0_seq1.mrna1;Target=comp156551_c0_seq1 1745 2002 +
Chr1	stalkie_big_nohaplotig	exon	65943883	65944017	100	+	.	Parent=comp156551_c0_seq1.mrna1;Target=comp156551_c0_seq1 2003 2137 +
Chr1	stalkie_big_nohaplotig	exon	65944071	65944320	100	+	.	Parent=comp156551_c0_seq1.mrna1;Target=comp156551_c0_seq1 2138 2387 +
Chr1	stalkie_big_nohaplotig	CDS	65941870	65942066	.	+	0	Parent=comp156551_c0_seq1.mrna1;Target=comp156551_c0_seq1 293 489 +
Chr1	stalkie_big_nohaplotig	CDS	65942124	65942535	.	+	1	Parent=comp156551_c0_seq1.mrna1;Target=comp156551_c0_seq1 490 901 +
Chr1	stalkie_big_nohaplotig	CDS	65942599	65943176	.	+	0	Parent=comp156551_c0_seq1.mrna1;Target=comp156551_c0_seq1 902 1479 +
Chr1	stalkie_big_nohaplotig	CDS	65943247	65943511	.	+	1	Parent=comp156551_c0_seq1.mrna1;Target=comp156551_c0_seq1 1480 1744 +
Chr1	stalkie_big_nohaplotig	CDS	65943571	65943828	.	+	0	Parent=comp156551_c0_seq1.mrna1;Target=comp156551_c0_seq1 1745 2002 +
Chr1	stalkie_big_nohaplotig	CDS	65943883	65944017	.	+	0	Parent=comp156551_c0_seq1.mrna1;Target=comp156551_c0_seq1 2003 2137 +
Chr1	stalkie_big_nohaplotig	CDS	65944071	65944112	.	+	0	Parent=comp156551_c0_seq1.mrna1;Target=comp156551_c0_seq1 2138 2179 +
Chr1	gffcl	locus	65952713	65953569	.	-	.	ID=RLOC_00008632;geneIDs=comp134827_c0_seq1.path1;transcripts=comp134827_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65952713	65953569	.	-	.	ID=comp134827_c0_seq1.mrna1;geneID=comp134827_c0_seq1.path1;Name=comp134827_c0_seq1;Dir=indeterminatecoverage=50.8;identity=100.0;matches=857;mismatches=0;indels=0;unknowns=0;Target=comp134827_c0_seq1 1686 830 .;CDS_Target=comp134827_c0_seq1 1202 1119 .;locus=RLOC_00008632
Chr1	stalkie_big_nohaplotig	exon	65952713	65953569	100	-	.	Parent=comp134827_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65953197	65953280	.	-	0	Parent=comp134827_c0_seq1.mrna1
Chr1	gffcl	locus	65976339	65977076	.	+	.	ID=RLOC_00008634;geneIDs=comp146572_c0_seq1.path1;transcripts=comp146572_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65976339	65977076	.	+	.	ID=comp146572_c0_seq1.mrna1;geneID=comp146572_c0_seq1.path1;Name=comp146572_c0_seq1;Dir=indeterminatecoverage=98.3;identity=95.2;matches=737;mismatches=1;indels=36;unknowns=0;Target=comp146572_c0_seq1 774 1 .;CDS_Target=comp146572_c0_seq1 628 473 .;locus=RLOC_00008634
Chr1	stalkie_big_nohaplotig	exon	65976339	65977076	95	+	.	Parent=comp146572_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65976811	65976930	.	+	0	Parent=comp146572_c0_seq1.mrna1
Chr1	gffcl	locus	65986639	65987063	.	+	.	ID=RLOC_00008635;geneIDs=comp117133_c0_seq1.path1;transcripts=comp117133_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65986639	65987063	.	+	.	ID=comp117133_c0_seq1.mrna1;geneID=comp117133_c0_seq1.path1;Name=comp117133_c0_seq1;Dir=indeterminatecoverage=99.8;identity=91.8;matches=414;mismatches=11;indels=26;unknowns=0;Target=comp117133_c0_seq1 451 1 .;CDS_Target=comp117133_c0_seq1 375 292 .;locus=RLOC_00008635
Chr1	stalkie_big_nohaplotig	exon	65986639	65987063	91	+	.	Parent=comp117133_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	65986904	65986987	.	+	0	Parent=comp117133_c0_seq1.mrna1
Chr1	gffcl	locus	65989764	65993464	.	+	.	ID=RLOC_00008636;geneIDs=FBgn0036032.1.path1;transcripts=FBgn0036032.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65989764	65993464	.	+	.	ID=FBgn0036032.1.mrna1;geneID=FBgn0036032.1.path1;Name=FBgn0036032.1;Dir=sensecoverage=100.0;identity=100.0;matches=3471;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008636
Chr1	stalkie_big_nohaplotig	exon	65989764	65993173	100	+	.	Parent=FBgn0036032.1.mrna1;Target=FBgn0036032.1 1 3410 +
Chr1	stalkie_big_nohaplotig	exon	65993404	65993464	100	+	.	Parent=FBgn0036032.1.mrna1;Target=FBgn0036032.1 3411 3471 +
Chr1	stalkie_big_nohaplotig	CDS	65989764	65993173	.	+	0	Parent=FBgn0036032.1.mrna1;Target=FBgn0036032.1 1 3410 +
Chr1	stalkie_big_nohaplotig	CDS	65993404	65993464	.	+	1	Parent=FBgn0036032.1.mrna1;Target=FBgn0036032.1 3411 3471 +
Chr1	gffcl	locus	65997092	65999003	.	-	.	ID=RLOC_00008637;geneIDs=FBgn0040475.1.path1;transcripts=FBgn0040475.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	65997092	65999003	.	-	.	ID=FBgn0040475.1.mrna1;geneID=FBgn0040475.1.path1;Name=FBgn0040475.1;Dir=sensecoverage=100.0;identity=100.0;matches=1659;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008637
Chr1	stalkie_big_nohaplotig	exon	65997092	65997380	100	-	.	Parent=FBgn0040475.1.mrna1;Target=FBgn0040475.1 1371 1659 +
Chr1	stalkie_big_nohaplotig	exon	65997435	65997672	100	-	.	Parent=FBgn0040475.1.mrna1;Target=FBgn0040475.1 1133 1370 +
Chr1	stalkie_big_nohaplotig	exon	65997726	65998140	100	-	.	Parent=FBgn0040475.1.mrna1;Target=FBgn0040475.1 718 1132 +
Chr1	stalkie_big_nohaplotig	exon	65998287	65999003	100	-	.	Parent=FBgn0040475.1.mrna1;Target=FBgn0040475.1 1 717 +
Chr1	stalkie_big_nohaplotig	CDS	65997092	65997380	.	-	1	Parent=FBgn0040475.1.mrna1;Target=FBgn0040475.1 1371 1659 +
Chr1	stalkie_big_nohaplotig	CDS	65997435	65997672	.	-	2	Parent=FBgn0040475.1.mrna1;Target=FBgn0040475.1 1133 1370 +
Chr1	stalkie_big_nohaplotig	CDS	65997726	65998140	.	-	0	Parent=FBgn0040475.1.mrna1;Target=FBgn0040475.1 718 1132 +
Chr1	stalkie_big_nohaplotig	CDS	65998287	65999003	.	-	0	Parent=FBgn0040475.1.mrna1;Target=FBgn0040475.1 1 717 +
Chr1	gffcl	locus	66002110	66004117	.	+	.	ID=RLOC_00008638;geneIDs=FBgn0052484.1.path1;transcripts=FBgn0052484.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66002110	66004117	.	+	.	ID=FBgn0052484.1.mrna1;geneID=FBgn0052484.1.path1;Name=FBgn0052484.1;Dir=sensecoverage=100.0;identity=99.5;matches=1890;mismatches=9;indels=0;unknowns=0;locus=RLOC_00008638
Chr1	stalkie_big_nohaplotig	exon	66002110	66003029	99	+	.	Parent=FBgn0052484.1.mrna1;Target=FBgn0052484.1 1 920 +
Chr1	stalkie_big_nohaplotig	exon	66003083	66003182	100	+	.	Parent=FBgn0052484.1.mrna1;Target=FBgn0052484.1 921 1020 +
Chr1	stalkie_big_nohaplotig	exon	66003239	66004117	100	+	.	Parent=FBgn0052484.1.mrna1;Target=FBgn0052484.1 1021 1899 +
Chr1	stalkie_big_nohaplotig	CDS	66002110	66003029	.	+	0	Parent=FBgn0052484.1.mrna1;Target=FBgn0052484.1 1 920 +
Chr1	stalkie_big_nohaplotig	CDS	66003083	66003182	.	+	1	Parent=FBgn0052484.1.mrna1;Target=FBgn0052484.1 921 1020 +
Chr1	stalkie_big_nohaplotig	CDS	66003239	66004117	.	+	0	Parent=FBgn0052484.1.mrna1;Target=FBgn0052484.1 1021 1899 +
Chr1	gffcl	locus	66077135	66081397	.	-	.	ID=RLOC_00008639;geneIDs=FBgn0000625.2.path2;transcripts=FBgn0000625.2.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	66077135	66081397	.	-	.	ID=FBgn0000625.2.mrna2;geneID=FBgn0000625.2.path2;Name=FBgn0000625.2;Dir=sensecoverage=77.2;identity=99.8;matches=1502;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008639
Chr1	stalkie_big_nohaplotig	exon	66077135	66077989	99	-	.	Parent=FBgn0000625.2.mrna2;Target=FBgn0000625.2 1096 1950 +
Chr1	stalkie_big_nohaplotig	exon	66078608	66078792	99	-	.	Parent=FBgn0000625.2.mrna2;Target=FBgn0000625.2 911 1095 +
Chr1	stalkie_big_nohaplotig	exon	66080073	66080396	99	-	.	Parent=FBgn0000625.2.mrna2;Target=FBgn0000625.2 587 910 +
Chr1	stalkie_big_nohaplotig	exon	66081257	66081397	100	-	.	Parent=FBgn0000625.2.mrna2;Target=FBgn0000625.2 446 586 +
Chr1	stalkie_big_nohaplotig	CDS	66077135	66077989	.	-	2	Parent=FBgn0000625.2.mrna2;Target=FBgn0000625.2 1096 1950 +
Chr1	stalkie_big_nohaplotig	CDS	66078608	66078792	.	-	1	Parent=FBgn0000625.2.mrna2;Target=FBgn0000625.2 911 1095 +
Chr1	stalkie_big_nohaplotig	CDS	66080073	66080396	.	-	1	Parent=FBgn0000625.2.mrna2;Target=FBgn0000625.2 587 910 +
Chr1	stalkie_big_nohaplotig	CDS	66081257	66081397	.	-	1	Parent=FBgn0000625.2.mrna2;Target=FBgn0000625.2 446 586 +
Chr1	gffcl	locus	66091594	66092733	.	.	.	ID=RLOC_00008640;geneIDs=FBgn0011361.1.path1,comp154954_c0_seq1.path1;transcripts=FBgn0011361.1.mrna1,comp154954_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66091594	66092733	.	+	.	ID=FBgn0011361.1.mrna1;geneID=FBgn0011361.1.path1;Name=FBgn0011361.1;Dir=sensecoverage=100.0;identity=100.0;matches=477;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008640
Chr1	stalkie_big_nohaplotig	exon	66091594	66091767	100	+	.	Parent=FBgn0011361.1.mrna1;Target=FBgn0011361.1 1 174 +
Chr1	stalkie_big_nohaplotig	exon	66092277	66092402	100	+	.	Parent=FBgn0011361.1.mrna1;Target=FBgn0011361.1 175 300 +
Chr1	stalkie_big_nohaplotig	exon	66092557	66092733	100	+	.	Parent=FBgn0011361.1.mrna1;Target=FBgn0011361.1 301 477 +
Chr1	stalkie_big_nohaplotig	CDS	66091594	66091767	.	+	0	Parent=FBgn0011361.1.mrna1;Target=FBgn0011361.1 1 174 +
Chr1	stalkie_big_nohaplotig	CDS	66092277	66092402	.	+	0	Parent=FBgn0011361.1.mrna1;Target=FBgn0011361.1 175 300 +
Chr1	stalkie_big_nohaplotig	CDS	66092557	66092733	.	+	0	Parent=FBgn0011361.1.mrna1;Target=FBgn0011361.1 301 477 +
Chr1	stalkie_big_nohaplotig	mRNA	66091745	66092134	.	-	.	ID=comp154954_c0_seq1.mrna1;geneID=comp154954_c0_seq1.path1;Name=comp154954_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=389;mismatches=1;indels=1;unknowns=0;Target=comp154954_c0_seq1 391 1 .;CDS_Target=comp154954_c0_seq1 344 315 .;locus=RLOC_00008640
Chr1	stalkie_big_nohaplotig	exon	66091745	66092134	99	-	.	Parent=comp154954_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	66091792	66091820	.	-	0	Parent=comp154954_c0_seq1.mrna1
Chr1	gffcl	locus	66096302	66097080	.	+	.	ID=RLOC_00008641;geneIDs=comp151344_c0_seq1.path1;transcripts=comp151344_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66096302	66097080	.	+	.	ID=comp151344_c0_seq1.mrna1;geneID=comp151344_c0_seq1.path1;Name=comp151344_c0_seq1;Dir=antisensecoverage=99.9;identity=98.9;matches=716;mismatches=8;indels=0;unknowns=0;locus=RLOC_00008641
Chr1	stalkie_big_nohaplotig	exon	66096302	66096572	98	+	.	Parent=comp151344_c0_seq1.mrna1;Target=comp151344_c0_seq1 455 725 -
Chr1	stalkie_big_nohaplotig	exon	66096628	66097080	99	+	.	Parent=comp151344_c0_seq1.mrna1;Target=comp151344_c0_seq1 2 454 -
Chr1	stalkie_big_nohaplotig	CDS	66096539	66096572	.	+	0	Parent=comp151344_c0_seq1.mrna1;Target=comp151344_c0_seq1 455 488 .
Chr1	stalkie_big_nohaplotig	CDS	66096628	66097031	.	+	2	Parent=comp151344_c0_seq1.mrna1;Target=comp151344_c0_seq1 51 454 .
Chr1	gffcl	locus	66097111	66097938	.	-	.	ID=RLOC_00008642;geneIDs=FBgn0035210.1.path1;transcripts=FBgn0035210.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66097111	66097938	.	-	.	ID=FBgn0035210.1.mrna1;geneID=FBgn0035210.1.path1;Name=FBgn0035210.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=827;mismatches=1;indels=0;unknowns=0;Target=FBgn0035210.1 828 1 .;locus=RLOC_00008642
Chr1	stalkie_big_nohaplotig	exon	66097111	66097938	99	-	.	Parent=FBgn0035210.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	66097111	66097938	.	-	0	Parent=FBgn0035210.1.mrna1
Chr1	gffcl	locus	66099074	66100630	.	+	.	ID=RLOC_00008643;geneIDs=FBgn0010217.1.path1;transcripts=FBgn0010217.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66099074	66100630	.	+	.	ID=FBgn0010217.1.mrna1;geneID=FBgn0010217.1.path1;Name=FBgn0010217.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1554;mismatches=3;indels=0;unknowns=0;Target=FBgn0010217.1 1557 1 .;locus=RLOC_00008643
Chr1	stalkie_big_nohaplotig	exon	66099074	66100630	99	+	.	Parent=FBgn0010217.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	66099074	66100630	.	+	0	Parent=FBgn0010217.1.mrna1
Chr1	gffcl	locus	66101665	66102979	.	-	.	ID=RLOC_00008644;geneIDs=FBgn0035211.1.path1;transcripts=FBgn0035211.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66101665	66102979	.	-	.	ID=FBgn0035211.1.mrna1;geneID=FBgn0035211.1.path1;Name=FBgn0035211.1;Dir=sensecoverage=100.0;identity=99.7;matches=1017;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008644
Chr1	stalkie_big_nohaplotig	exon	66101665	66101747	100	-	.	Parent=FBgn0035211.1.mrna1;Target=FBgn0035211.1 938 1020 +
Chr1	stalkie_big_nohaplotig	exon	66101802	66101931	100	-	.	Parent=FBgn0035211.1.mrna1;Target=FBgn0035211.1 808 937 +
Chr1	stalkie_big_nohaplotig	exon	66101994	66102417	99	-	.	Parent=FBgn0035211.1.mrna1;Target=FBgn0035211.1 384 807 +
Chr1	stalkie_big_nohaplotig	exon	66102471	66102739	100	-	.	Parent=FBgn0035211.1.mrna1;Target=FBgn0035211.1 115 383 +
Chr1	stalkie_big_nohaplotig	exon	66102812	66102895	100	-	.	Parent=FBgn0035211.1.mrna1;Target=FBgn0035211.1 31 114 +
Chr1	stalkie_big_nohaplotig	exon	66102950	66102979	100	-	.	Parent=FBgn0035211.1.mrna1;Target=FBgn0035211.1 1 30 +
Chr1	stalkie_big_nohaplotig	CDS	66101665	66101747	.	-	2	Parent=FBgn0035211.1.mrna1;Target=FBgn0035211.1 938 1020 +
Chr1	stalkie_big_nohaplotig	CDS	66101802	66101931	.	-	0	Parent=FBgn0035211.1.mrna1;Target=FBgn0035211.1 808 937 +
Chr1	stalkie_big_nohaplotig	CDS	66101994	66102417	.	-	1	Parent=FBgn0035211.1.mrna1;Target=FBgn0035211.1 384 807 +
Chr1	stalkie_big_nohaplotig	CDS	66102471	66102739	.	-	0	Parent=FBgn0035211.1.mrna1;Target=FBgn0035211.1 115 383 +
Chr1	stalkie_big_nohaplotig	CDS	66102812	66102895	.	-	0	Parent=FBgn0035211.1.mrna1;Target=FBgn0035211.1 31 114 +
Chr1	stalkie_big_nohaplotig	CDS	66102950	66102979	.	-	0	Parent=FBgn0035211.1.mrna1;Target=FBgn0035211.1 1 30 +
Chr1	gffcl	locus	66116040	66120699	.	+	.	ID=RLOC_00008648;geneIDs=FBgn0010786.1.path1;transcripts=FBgn0010786.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66116040	66120699	.	+	.	ID=FBgn0010786.1.mrna1;geneID=FBgn0010786.1.path1;Name=FBgn0010786.1;Dir=sensecoverage=100.0;identity=99.6;matches=1706;mismatches=7;indels=0;unknowns=0;locus=RLOC_00008648
Chr1	stalkie_big_nohaplotig	exon	66116040	66116099	100	+	.	Parent=FBgn0010786.1.mrna1;Target=FBgn0010786.1 1 60 +
Chr1	stalkie_big_nohaplotig	exon	66116639	66116711	100	+	.	Parent=FBgn0010786.1.mrna1;Target=FBgn0010786.1 61 133 +
Chr1	stalkie_big_nohaplotig	exon	66119067	66119336	100	+	.	Parent=FBgn0010786.1.mrna1;Target=FBgn0010786.1 134 403 +
Chr1	stalkie_big_nohaplotig	exon	66119390	66120699	99	+	.	Parent=FBgn0010786.1.mrna1;Target=FBgn0010786.1 404 1713 +
Chr1	stalkie_big_nohaplotig	CDS	66116040	66116099	.	+	0	Parent=FBgn0010786.1.mrna1;Target=FBgn0010786.1 1 60 +
Chr1	stalkie_big_nohaplotig	CDS	66116639	66116711	.	+	0	Parent=FBgn0010786.1.mrna1;Target=FBgn0010786.1 61 133 +
Chr1	stalkie_big_nohaplotig	CDS	66119067	66119336	.	+	2	Parent=FBgn0010786.1.mrna1;Target=FBgn0010786.1 134 403 +
Chr1	stalkie_big_nohaplotig	CDS	66119390	66120699	.	+	2	Parent=FBgn0010786.1.mrna1;Target=FBgn0010786.1 404 1713 +
Chr1	gffcl	locus	66195933	66196476	.	+	.	ID=RLOC_00008650;geneIDs=comp133949_c1_seq1.path1;transcripts=comp133949_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66195933	66196476	.	+	.	ID=comp133949_c1_seq1.mrna1;geneID=comp133949_c1_seq1.path1;Name=comp133949_c1_seq1;Dir=indeterminatecoverage=92.0;identity=99.8;matches=543;mismatches=0;indels=1;unknowns=0;Target=comp133949_c1_seq1 590 48 .;CDS_Target=comp133949_c1_seq1 338 114 .;locus=RLOC_00008650
Chr1	stalkie_big_nohaplotig	exon	66195933	66196476	99	+	.	Parent=comp133949_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	66195999	66196224	.	+	0	Parent=comp133949_c1_seq1.mrna1
Chr1	gffcl	locus	66227548	66228107	.	+	.	ID=RLOC_00008651;geneIDs=comp136471_c1_seq1.path1;transcripts=comp136471_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66227548	66228107	.	+	.	ID=comp136471_c1_seq1.mrna1;geneID=comp136471_c1_seq1.path1;Name=comp136471_c1_seq1;Dir=indeterminatecoverage=98.8;identity=99.5;matches=557;mismatches=3;indels=0;unknowns=0;Target=comp136471_c1_seq1 560 1 .;CDS_Target=comp136471_c1_seq1 473 333 .;locus=RLOC_00008651
Chr1	stalkie_big_nohaplotig	exon	66227548	66228107	99	+	.	Parent=comp136471_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	66227880	66228020	.	+	0	Parent=comp136471_c1_seq1.mrna1
Chr1	gffcl	locus	66228960	66248036	.	+	.	ID=RLOC_00008652;geneIDs=FBgn0000625.2.path1;transcripts=FBgn0000625.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66228960	66248036	.	+	.	ID=FBgn0000625.2.mrna1;geneID=FBgn0000625.2.path1;Name=FBgn0000625.2;Dir=sensecoverage=22.8;identity=99.8;matches=441;mismatches=1;indels=0;unknowns=3;locus=RLOC_00008652
Chr1	stalkie_big_nohaplotig	exon	66228960	66229197	99	+	.	Parent=FBgn0000625.2.mrna1;Target=FBgn0000625.2 1 238 +
Chr1	stalkie_big_nohaplotig	exon	66247830	66248036	100	+	.	Parent=FBgn0000625.2.mrna1;Target=FBgn0000625.2 239 445 +
Chr1	stalkie_big_nohaplotig	CDS	66228960	66229197	.	+	0	Parent=FBgn0000625.2.mrna1;Target=FBgn0000625.2 1 238 +
Chr1	stalkie_big_nohaplotig	CDS	66247830	66248036	.	+	2	Parent=FBgn0000625.2.mrna1;Target=FBgn0000625.2 239 445 +
Chr1	gffcl	locus	66254446	66255585	.	.	.	ID=RLOC_00008653;geneIDs=FBgn0011361.1.path2,comp154954_c0_seq1.path2;transcripts=FBgn0011361.1.mrna2,comp154954_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	66254446	66255585	.	-	.	ID=FBgn0011361.1.mrna2;geneID=FBgn0011361.1.path2;Name=FBgn0011361.1;Dir=sensecoverage=100.0;identity=100.0;matches=477;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008653
Chr1	stalkie_big_nohaplotig	exon	66254446	66254622	100	-	.	Parent=FBgn0011361.1.mrna2;Target=FBgn0011361.1 301 477 +
Chr1	stalkie_big_nohaplotig	exon	66254777	66254902	100	-	.	Parent=FBgn0011361.1.mrna2;Target=FBgn0011361.1 175 300 +
Chr1	stalkie_big_nohaplotig	exon	66255412	66255585	100	-	.	Parent=FBgn0011361.1.mrna2;Target=FBgn0011361.1 1 174 +
Chr1	stalkie_big_nohaplotig	CDS	66254446	66254622	.	-	0	Parent=FBgn0011361.1.mrna2;Target=FBgn0011361.1 301 477 +
Chr1	stalkie_big_nohaplotig	CDS	66254777	66254902	.	-	0	Parent=FBgn0011361.1.mrna2;Target=FBgn0011361.1 175 300 +
Chr1	stalkie_big_nohaplotig	CDS	66255412	66255585	.	-	0	Parent=FBgn0011361.1.mrna2;Target=FBgn0011361.1 1 174 +
Chr1	stalkie_big_nohaplotig	mRNA	66255045	66255434	.	+	.	ID=comp154954_c0_seq1.mrna2;geneID=comp154954_c0_seq1.path2;Name=comp154954_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=389;mismatches=1;indels=1;unknowns=0;Target=comp154954_c0_seq1 391 1 .;CDS_Target=comp154954_c0_seq1 344 315 .;locus=RLOC_00008653
Chr1	stalkie_big_nohaplotig	exon	66255045	66255434	99	+	.	Parent=comp154954_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	66255359	66255387	.	+	0	Parent=comp154954_c0_seq1.mrna2
Chr1	gffcl	locus	66259983	66356890	.	-	.	ID=RLOC_00008654;geneIDs=FBgn0010246.1.path1,comp146956_c1_seq1.path1,comp160698_c1_seq1.path1;transcripts=comp160698_c1_seq1.mrna1,FBgn0010246.1.mrna1,comp146956_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66259983	66356890	.	-	.	ID=comp160698_c1_seq1.mrna1;geneID=comp160698_c1_seq1.path1;Name=comp160698_c1_seq1;Dir=antisensecoverage=91.7;identity=99.8;matches=3933;mismatches=8;indels=1;unknowns=0;locus=RLOC_00008654
Chr1	stalkie_big_nohaplotig	exon	66259983	66260199	100	-	.	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 10 226 -
Chr1	stalkie_big_nohaplotig	exon	66260259	66260358	99	-	.	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 227 326 -
Chr1	stalkie_big_nohaplotig	exon	66260418	66260850	99	-	.	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 327 760 -
Chr1	stalkie_big_nohaplotig	exon	66260923	66261572	99	-	.	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 761 1410 -
Chr1	stalkie_big_nohaplotig	exon	66261648	66262822	100	-	.	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 1411 2585 -
Chr1	stalkie_big_nohaplotig	exon	66262885	66263276	99	-	.	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 2586 2977 -
Chr1	stalkie_big_nohaplotig	exon	66263379	66263449	100	-	.	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 2978 3048 -
Chr1	stalkie_big_nohaplotig	exon	66263510	66263625	100	-	.	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 3049 3164 -
Chr1	stalkie_big_nohaplotig	exon	66265660	66265804	99	-	.	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 3165 3309 -
Chr1	stalkie_big_nohaplotig	exon	66273360	66273381	95	-	.	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 3310 3331 -
Chr1	stalkie_big_nohaplotig	exon	66289205	66289785	99	-	.	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 3332 3912 -
Chr1	stalkie_big_nohaplotig	exon	66290926	66290928	100	-	.	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 3913 3915 -
Chr1	stalkie_big_nohaplotig	exon	66298368	66298369	100	-	.	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 3916 3917 -
Chr1	stalkie_big_nohaplotig	exon	66303400	66303408	88	-	.	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 3918 3926 -
Chr1	stalkie_big_nohaplotig	exon	66309570	66309574	100	-	.	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 3927 3931 -
Chr1	stalkie_big_nohaplotig	exon	66314424	66314427	100	-	.	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 3932 3935 -
Chr1	stalkie_big_nohaplotig	exon	66321686	66321687	100	-	.	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 3936 3937 -
Chr1	stalkie_big_nohaplotig	exon	66328335	66328336	100	-	.	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 3938 3939 -
Chr1	stalkie_big_nohaplotig	exon	66344271	66344272	100	-	.	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 3940 3941 -
Chr1	stalkie_big_nohaplotig	exon	66347368	66347369	100	-	.	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 3942 3943 -
Chr1	stalkie_big_nohaplotig	exon	66356884	66356890	100	-	.	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 3944 3950 -
Chr1	stalkie_big_nohaplotig	CDS	66260838	66260850	.	-	2	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 747 760 .
Chr1	stalkie_big_nohaplotig	CDS	66260923	66261572	.	-	1	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 761 1410 .
Chr1	stalkie_big_nohaplotig	CDS	66261648	66262822	.	-	0	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 1411 2585 .
Chr1	stalkie_big_nohaplotig	CDS	66262885	66263276	.	-	2	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 2586 2977 .
Chr1	stalkie_big_nohaplotig	CDS	66263379	66263449	.	-	1	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 2978 3048 .
Chr1	stalkie_big_nohaplotig	CDS	66263510	66263625	.	-	0	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 3049 3164 .
Chr1	stalkie_big_nohaplotig	CDS	66265660	66265785	.	-	0	Parent=comp160698_c1_seq1.mrna1;Target=comp160698_c1_seq1 3165 3290 .
Chr1	stalkie_big_nohaplotig	mRNA	66260923	66265848	.	-	.	ID=FBgn0010246.1.mrna1;geneID=FBgn0010246.1.path1;Name=FBgn0010246.1;Dir=sensecoverage=99.6;identity=99.8;matches=2588;mismatches=5;indels=0;unknowns=0;locus=RLOC_00008654
Chr1	stalkie_big_nohaplotig	exon	66260923	66261572	99	-	.	Parent=FBgn0010246.1.mrna1;Target=FBgn0010246.1 1944 2593 +
Chr1	stalkie_big_nohaplotig	exon	66261648	66262822	100	-	.	Parent=FBgn0010246.1.mrna1;Target=FBgn0010246.1 769 1943 +
Chr1	stalkie_big_nohaplotig	exon	66262885	66263276	99	-	.	Parent=FBgn0010246.1.mrna1;Target=FBgn0010246.1 377 768 +
Chr1	stalkie_big_nohaplotig	exon	66263379	66263449	100	-	.	Parent=FBgn0010246.1.mrna1;Target=FBgn0010246.1 306 376 +
Chr1	stalkie_big_nohaplotig	exon	66263510	66263625	100	-	.	Parent=FBgn0010246.1.mrna1;Target=FBgn0010246.1 190 305 +
Chr1	stalkie_big_nohaplotig	exon	66265660	66265848	98	-	.	Parent=FBgn0010246.1.mrna1;Target=FBgn0010246.1 1 189 +
Chr1	stalkie_big_nohaplotig	CDS	66260924	66261572	.	-	1	Parent=FBgn0010246.1.mrna1;Target=FBgn0010246.1 1944 2592 +
Chr1	stalkie_big_nohaplotig	CDS	66261648	66262822	.	-	0	Parent=FBgn0010246.1.mrna1;Target=FBgn0010246.1 769 1943 +
Chr1	stalkie_big_nohaplotig	CDS	66262885	66263276	.	-	2	Parent=FBgn0010246.1.mrna1;Target=FBgn0010246.1 377 768 +
Chr1	stalkie_big_nohaplotig	CDS	66263379	66263449	.	-	1	Parent=FBgn0010246.1.mrna1;Target=FBgn0010246.1 306 376 +
Chr1	stalkie_big_nohaplotig	CDS	66263510	66263625	.	-	0	Parent=FBgn0010246.1.mrna1;Target=FBgn0010246.1 190 305 +
Chr1	stalkie_big_nohaplotig	CDS	66265660	66265848	.	-	0	Parent=FBgn0010246.1.mrna1;Target=FBgn0010246.1 1 189 +
Chr1	stalkie_big_nohaplotig	mRNA	66347351	66349261	.	-	.	ID=comp146956_c1_seq1.mrna1;geneID=comp146956_c1_seq1.path1;Name=comp146956_c1_seq1;Dir=indeterminatecoverage=99.9;identity=99.1;matches=1905;mismatches=6;indels=11;unknowns=0;Target=comp146956_c1_seq1 1922 1 .;CDS_Target=comp146956_c1_seq1 311 66 .;locus=RLOC_00008654
Chr1	stalkie_big_nohaplotig	exon	66347351	66349261	99	-	.	Parent=comp146956_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	66348951	66349196	.	-	0	Parent=comp146956_c1_seq1.mrna1
Chr1	gffcl	locus	66294446	66295918	.	.	.	ID=RLOC_00008655;geneIDs=FBgn0036341.1.path1,comp146158_c0_seq1.path1;transcripts=FBgn0036341.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66295011	66295918	.	+	.	ID=FBgn0036341.1.mrna1;geneID=FBgn0036341.1.path1;Name=FBgn0036341.1;Dir=sensecoverage=100.0;identity=99.9;matches=839;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008655
Chr1	stalkie_big_nohaplotig	exon	66295011	66295674	99	+	.	Parent=FBgn0036341.1.mrna1;Target=FBgn0036341.1 1 664 +
Chr1	stalkie_big_nohaplotig	exon	66295743	66295918	100	+	.	Parent=FBgn0036341.1.mrna1;Target=FBgn0036341.1 665 840 +
Chr1	stalkie_big_nohaplotig	CDS	66295011	66295674	.	+	0	Parent=FBgn0036341.1.mrna1;Target=FBgn0036341.1 1 664 +
Chr1	stalkie_big_nohaplotig	CDS	66295743	66295918	.	+	2	Parent=FBgn0036341.1.mrna1;Target=FBgn0036341.1 665 840 +
Chr1	gffcl	locus	66297854	66298241	.	+	.	ID=RLOC_00008656;geneIDs=FBgn0036342.1.path1;transcripts=FBgn0036342.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66297854	66298241	.	+	.	ID=FBgn0036342.1.mrna1;geneID=FBgn0036342.1.path1;Name=FBgn0036342.1;Dir=sensecoverage=100.0;identity=99.7;matches=326;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008656
Chr1	stalkie_big_nohaplotig	exon	66297854	66297980	99	+	.	Parent=FBgn0036342.1.mrna1;Target=FBgn0036342.1 1 127 +
Chr1	stalkie_big_nohaplotig	exon	66298042	66298241	100	+	.	Parent=FBgn0036342.1.mrna1;Target=FBgn0036342.1 128 327 +
Chr1	stalkie_big_nohaplotig	CDS	66297854	66297980	.	+	0	Parent=FBgn0036342.1.mrna1;Target=FBgn0036342.1 1 127 +
Chr1	stalkie_big_nohaplotig	CDS	66298042	66298241	.	+	2	Parent=FBgn0036342.1.mrna1;Target=FBgn0036342.1 128 327 +
Chr1	gffcl	locus	66309074	66310024	.	+	.	ID=RLOC_00008657;geneIDs=AGAP011367.1.path1;transcripts=AGAP011367.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66309074	66310024	.	+	.	ID=AGAP011367.1.mrna1;geneID=AGAP011367.1.path1;Name=AGAP011367.1;Dir=sensecoverage=100.0;identity=99.6;matches=804;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008657
Chr1	stalkie_big_nohaplotig	exon	66309074	66309182	98	+	.	Parent=AGAP011367.1.mrna1;Target=AGAP011367.1 1 109 +
Chr1	stalkie_big_nohaplotig	exon	66309247	66309489	100	+	.	Parent=AGAP011367.1.mrna1;Target=AGAP011367.1 110 352 +
Chr1	stalkie_big_nohaplotig	exon	66309570	66310024	99	+	.	Parent=AGAP011367.1.mrna1;Target=AGAP011367.1 353 807 +
Chr1	stalkie_big_nohaplotig	CDS	66309074	66309182	.	+	0	Parent=AGAP011367.1.mrna1;Target=AGAP011367.1 1 109 +
Chr1	stalkie_big_nohaplotig	CDS	66309247	66309489	.	+	2	Parent=AGAP011367.1.mrna1;Target=AGAP011367.1 110 352 +
Chr1	stalkie_big_nohaplotig	CDS	66309570	66310024	.	+	2	Parent=AGAP011367.1.mrna1;Target=AGAP011367.1 353 807 +
Chr1	gffcl	locus	66332049	66333344	.	+	.	ID=RLOC_00008658;geneIDs=comp148451_c0_seq1.path1;transcripts=comp148451_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66332049	66333344	.	+	.	ID=comp148451_c0_seq1.mrna1;geneID=comp148451_c0_seq1.path1;Name=comp148451_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.9;matches=1295;mismatches=1;indels=0;unknowns=0;Target=comp148451_c0_seq1 1296 1 .;CDS_Target=comp148451_c0_seq1 964 752 .;locus=RLOC_00008658
Chr1	stalkie_big_nohaplotig	exon	66332049	66333344	99	+	.	Parent=comp148451_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	66332800	66333012	.	+	0	Parent=comp148451_c0_seq1.mrna1
Chr1	gffcl	locus	66395714	66397593	.	+	.	ID=RLOC_00008660;geneIDs=comp158543_c0_seq1.path1;transcripts=comp158543_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66395714	66397593	.	+	.	ID=comp158543_c0_seq1.mrna1;geneID=comp158543_c0_seq1.path1;Name=comp158543_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=1872;mismatches=8;indels=26;unknowns=0;Target=comp158543_c0_seq1 1906 1 .;CDS_Target=comp158543_c0_seq1 273 163 .;locus=RLOC_00008660
Chr1	stalkie_big_nohaplotig	exon	66395714	66397593	98	+	.	Parent=comp158543_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	66395875	66395972	.	+	0	Parent=comp158543_c0_seq1.mrna1
Chr1	gffcl	locus	66417030	66419243	.	+	.	ID=RLOC_00008661;geneIDs=FBgn0010452.3.path1;transcripts=FBgn0010452.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66417030	66419243	.	+	.	ID=FBgn0010452.3.mrna1;geneID=FBgn0010452.3.path1;Name=FBgn0010452.3;Dir=indeterminatecoverage=100.0;identity=99.8;matches=2209;mismatches=5;indels=0;unknowns=0;Target=FBgn0010452.3 2214 1 .;locus=RLOC_00008661
Chr1	stalkie_big_nohaplotig	exon	66417030	66419243	99	+	.	Parent=FBgn0010452.3.mrna1
Chr1	stalkie_big_nohaplotig	CDS	66417030	66419243	.	+	0	Parent=FBgn0010452.3.mrna1
Chr1	gffcl	locus	66469085	66470613	.	-	.	ID=RLOC_00008662;geneIDs=FBgn0003889.3.path1;transcripts=FBgn0003889.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66469085	66470613	.	-	.	ID=FBgn0003889.3.mrna1;geneID=FBgn0003889.3.path1;Name=FBgn0003889.3;Dir=sensecoverage=100.0;identity=99.8;matches=1335;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008662
Chr1	stalkie_big_nohaplotig	exon	66469085	66470023	99	-	.	Parent=FBgn0003889.3.mrna1;Target=FBgn0003889.3 400 1338 +
Chr1	stalkie_big_nohaplotig	exon	66470215	66470613	99	-	.	Parent=FBgn0003889.3.mrna1;Target=FBgn0003889.3 1 399 +
Chr1	stalkie_big_nohaplotig	CDS	66469085	66470023	.	-	0	Parent=FBgn0003889.3.mrna1;Target=FBgn0003889.3 400 1338 +
Chr1	stalkie_big_nohaplotig	CDS	66470215	66470613	.	-	0	Parent=FBgn0003889.3.mrna1;Target=FBgn0003889.3 1 399 +
Chr1	gffcl	locus	66476257	66477812	.	-	.	ID=RLOC_00008663;geneIDs=FBgn0003889.1.path1;transcripts=FBgn0003889.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66476257	66477812	.	-	.	ID=FBgn0003889.1.mrna1;geneID=FBgn0003889.1.path1;Name=FBgn0003889.1;Dir=sensecoverage=100.0;identity=99.7;matches=1334;mismatches=4;indels=0;unknowns=0;locus=RLOC_00008663
Chr1	stalkie_big_nohaplotig	exon	66476257	66477198	99	-	.	Parent=FBgn0003889.1.mrna1;Target=FBgn0003889.1 397 1338 +
Chr1	stalkie_big_nohaplotig	exon	66477417	66477812	99	-	.	Parent=FBgn0003889.1.mrna1;Target=FBgn0003889.1 1 396 +
Chr1	stalkie_big_nohaplotig	CDS	66476257	66477198	.	-	0	Parent=FBgn0003889.1.mrna1;Target=FBgn0003889.1 397 1338 +
Chr1	stalkie_big_nohaplotig	CDS	66477417	66477812	.	-	0	Parent=FBgn0003889.1.mrna1;Target=FBgn0003889.1 1 396 +
Chr1	gffcl	locus	66477868	66478219	.	-	.	ID=RLOC_00008664;geneIDs=comp115102_c0_seq1.path1;transcripts=comp115102_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66477868	66478219	.	-	.	ID=comp115102_c0_seq1.mrna1;geneID=comp115102_c0_seq1.path1;Name=comp115102_c0_seq1;Dir=antisensecoverage=93.3;identity=98.9;matches=262;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008664
Chr1	stalkie_big_nohaplotig	exon	66477868	66477889	100	-	.	Parent=comp115102_c0_seq1.mrna1;Target=comp115102_c0_seq1 1 22 -
Chr1	stalkie_big_nohaplotig	exon	66477977	66478219	98	-	.	Parent=comp115102_c0_seq1.mrna1;Target=comp115102_c0_seq1 23 265 -
Chr1	stalkie_big_nohaplotig	CDS	66477877	66477889	.	-	1	Parent=comp115102_c0_seq1.mrna1;Target=comp115102_c0_seq1 10 22 .
Chr1	stalkie_big_nohaplotig	CDS	66477977	66478014	.	-	0	Parent=comp115102_c0_seq1.mrna1;Target=comp115102_c0_seq1 23 60 .
Chr1	gffcl	locus	66480469	66481996	.	-	.	ID=RLOC_00008665;geneIDs=FBgn0003889.3.path2;transcripts=FBgn0003889.3.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	66480469	66481996	.	-	.	ID=FBgn0003889.3.mrna2;geneID=FBgn0003889.3.path2;Name=FBgn0003889.3;Dir=sensecoverage=99.9;identity=99.8;matches=1334;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008665
Chr1	stalkie_big_nohaplotig	exon	66480469	66481407	99	-	.	Parent=FBgn0003889.3.mrna2;Target=FBgn0003889.3 400 1338 +
Chr1	stalkie_big_nohaplotig	exon	66481599	66481996	99	-	.	Parent=FBgn0003889.3.mrna2;Target=FBgn0003889.3 2 399 +
Chr1	stalkie_big_nohaplotig	CDS	66480469	66481407	.	-	0	Parent=FBgn0003889.3.mrna2;Target=FBgn0003889.3 400 1338 +
Chr1	stalkie_big_nohaplotig	CDS	66481599	66481994	.	-	0	Parent=FBgn0003889.3.mrna2;Target=FBgn0003889.3 4 399 +
Chr1	gffcl	locus	66487054	66488609	.	-	.	ID=RLOC_00008666;geneIDs=FBgn0003889.1.path2;transcripts=FBgn0003889.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	66487054	66488609	.	-	.	ID=FBgn0003889.1.mrna2;geneID=FBgn0003889.1.path2;Name=FBgn0003889.1;Dir=sensecoverage=100.0;identity=99.7;matches=1334;mismatches=4;indels=0;unknowns=0;locus=RLOC_00008666
Chr1	stalkie_big_nohaplotig	exon	66487054	66487995	99	-	.	Parent=FBgn0003889.1.mrna2;Target=FBgn0003889.1 397 1338 +
Chr1	stalkie_big_nohaplotig	exon	66488214	66488609	99	-	.	Parent=FBgn0003889.1.mrna2;Target=FBgn0003889.1 1 396 +
Chr1	stalkie_big_nohaplotig	CDS	66487054	66487995	.	-	0	Parent=FBgn0003889.1.mrna2;Target=FBgn0003889.1 397 1338 +
Chr1	stalkie_big_nohaplotig	CDS	66488214	66488609	.	-	0	Parent=FBgn0003889.1.mrna2;Target=FBgn0003889.1 1 396 +
Chr1	gffcl	locus	66488665	66489016	.	-	.	ID=RLOC_00008667;geneIDs=comp115102_c0_seq1.path2;transcripts=comp115102_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	66488665	66489016	.	-	.	ID=comp115102_c0_seq1.mrna2;geneID=comp115102_c0_seq1.path2;Name=comp115102_c0_seq1;Dir=antisensecoverage=93.3;identity=98.9;matches=262;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008667
Chr1	stalkie_big_nohaplotig	exon	66488665	66488686	100	-	.	Parent=comp115102_c0_seq1.mrna2;Target=comp115102_c0_seq1 1 22 -
Chr1	stalkie_big_nohaplotig	exon	66488774	66489016	98	-	.	Parent=comp115102_c0_seq1.mrna2;Target=comp115102_c0_seq1 23 265 -
Chr1	stalkie_big_nohaplotig	CDS	66488674	66488686	.	-	1	Parent=comp115102_c0_seq1.mrna2;Target=comp115102_c0_seq1 10 22 .
Chr1	stalkie_big_nohaplotig	CDS	66488774	66488811	.	-	0	Parent=comp115102_c0_seq1.mrna2;Target=comp115102_c0_seq1 23 60 .
Chr1	gffcl	locus	66497596	66498258	.	-	.	ID=RLOC_00008668;geneIDs=comp134638_c0_seq1.path1;transcripts=comp134638_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66497596	66498258	.	-	.	ID=comp134638_c0_seq1.mrna1;geneID=comp134638_c0_seq1.path1;Name=comp134638_c0_seq1;Dir=sensecoverage=97.0;identity=99.6;matches=549;mismatches=2;indels=0;unknowns=0;Target=comp134638_c0_seq1 18 224 +;locus=RLOC_00008668
Chr1	stalkie_big_nohaplotig	exon	66497596	66497711	100	-	.	Parent=comp134638_c0_seq1.mrna1;Target=comp134638_c0_seq1 453 568 +
Chr1	stalkie_big_nohaplotig	exon	66497763	66497824	100	-	.	Parent=comp134638_c0_seq1.mrna1;Target=comp134638_c0_seq1 391 452 +
Chr1	stalkie_big_nohaplotig	exon	66497886	66498258	99	-	.	Parent=comp134638_c0_seq1.mrna1;Target=comp134638_c0_seq1 18 390 +
Chr1	stalkie_big_nohaplotig	CDS	66498052	66498258	.	-	0	Parent=comp134638_c0_seq1.mrna1
Chr1	gffcl	locus	66500212	66500702	.	-	.	ID=RLOC_00008669;geneIDs=comp142716_c0_seq1.path1;transcripts=comp142716_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66500212	66500702	.	-	.	ID=comp142716_c0_seq1.mrna1;geneID=comp142716_c0_seq1.path1;Name=comp142716_c0_seq1;Dir=indeterminatecoverage=99.0;identity=98.0;matches=482;mismatches=6;indels=4;unknowns=0;Target=comp142716_c0_seq1 489 1 .;CDS_Target=comp142716_c0_seq1 164 3 .;locus=RLOC_00008669
Chr1	stalkie_big_nohaplotig	exon	66500212	66500702	97	-	.	Parent=comp142716_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	66500539	66500700	.	-	0	Parent=comp142716_c0_seq1.mrna1
Chr1	gffcl	locus	66505840	66507407	.	+	.	ID=RLOC_00008670;geneIDs=FBgn0029990.1.path1;transcripts=FBgn0029990.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66505840	66507407	.	+	.	ID=FBgn0029990.1.mrna1;geneID=FBgn0029990.1.path1;Name=FBgn0029990.1;Dir=sensecoverage=100.0;identity=98.0;matches=1232;mismatches=25;indels=0;unknowns=0;locus=RLOC_00008670
Chr1	stalkie_big_nohaplotig	exon	66505840	66506081	98	+	.	Parent=FBgn0029990.1.mrna1;Target=FBgn0029990.1 1 242 +
Chr1	stalkie_big_nohaplotig	exon	66506187	66506529	96	+	.	Parent=FBgn0029990.1.mrna1;Target=FBgn0029990.1 243 585 +
Chr1	stalkie_big_nohaplotig	exon	66506609	66506685	96	+	.	Parent=FBgn0029990.1.mrna1;Target=FBgn0029990.1 586 662 +
Chr1	stalkie_big_nohaplotig	exon	66506746	66507127	98	+	.	Parent=FBgn0029990.1.mrna1;Target=FBgn0029990.1 663 1044 +
Chr1	stalkie_big_nohaplotig	exon	66507195	66507407	99	+	.	Parent=FBgn0029990.1.mrna1;Target=FBgn0029990.1 1045 1257 +
Chr1	stalkie_big_nohaplotig	CDS	66505840	66506081	.	+	0	Parent=FBgn0029990.1.mrna1;Target=FBgn0029990.1 1 242 +
Chr1	stalkie_big_nohaplotig	CDS	66506187	66506529	.	+	1	Parent=FBgn0029990.1.mrna1;Target=FBgn0029990.1 243 585 +
Chr1	stalkie_big_nohaplotig	CDS	66506609	66506685	.	+	0	Parent=FBgn0029990.1.mrna1;Target=FBgn0029990.1 586 662 +
Chr1	stalkie_big_nohaplotig	CDS	66506746	66507127	.	+	1	Parent=FBgn0029990.1.mrna1;Target=FBgn0029990.1 663 1044 +
Chr1	stalkie_big_nohaplotig	CDS	66507195	66507407	.	+	0	Parent=FBgn0029990.1.mrna1;Target=FBgn0029990.1 1045 1257 +
Chr1	gffcl	locus	66507980	66508345	.	+	.	ID=RLOC_00008671;geneIDs=comp130395_c2_seq1.path1;transcripts=comp130395_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66507980	66508345	.	+	.	ID=comp130395_c2_seq1.mrna1;geneID=comp130395_c2_seq1.path1;Name=comp130395_c2_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=360;mismatches=6;indels=4;unknowns=0;Target=comp130395_c2_seq1 370 1 .;CDS_Target=comp130395_c2_seq1 219 121 .;locus=RLOC_00008671
Chr1	stalkie_big_nohaplotig	exon	66507980	66508345	97	+	.	Parent=comp130395_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	66508100	66508198	.	+	0	Parent=comp130395_c2_seq1.mrna1
Chr1	gffcl	locus	66535846	66536914	.	+	.	ID=RLOC_00008672;geneIDs=comp146711_c0_seq1.path1;transcripts=comp146711_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66535846	66536914	.	+	.	ID=comp146711_c0_seq1.mrna1;geneID=comp146711_c0_seq1.path1;Name=comp146711_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.0;matches=1012;mismatches=31;indels=34;unknowns=0;Target=comp146711_c0_seq1 1051 1 .;CDS_Target=comp146711_c0_seq1 673 632 .;locus=RLOC_00008672
Chr1	stalkie_big_nohaplotig	exon	66535846	66536914	93	+	.	Parent=comp146711_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	66536475	66536512	.	+	0	Parent=comp146711_c0_seq1.mrna1
Chr1	gffcl	locus	66552193	66555825	.	-	.	ID=RLOC_00008673;geneIDs=comp135420_c0_seq1.path1;transcripts=comp135420_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66552193	66555825	.	-	.	ID=comp135420_c0_seq1.mrna1;geneID=comp135420_c0_seq1.path1;Name=comp135420_c0_seq1;Dir=sensecoverage=99.8;identity=94.8;matches=932;mismatches=29;indels=22;unknowns=0;Target=comp135420_c0_seq1 672 905 +;locus=RLOC_00008673
Chr1	stalkie_big_nohaplotig	exon	66552193	66553117	94	-	.	Parent=comp135420_c0_seq1.mrna1;Target=comp135420_c0_seq1 48 972 +
Chr1	stalkie_big_nohaplotig	exon	66555779	66555825	95	-	.	Parent=comp135420_c0_seq1.mrna1;Target=comp135420_c0_seq1 1 47 +
Chr1	stalkie_big_nohaplotig	CDS	66552260	66552493	.	-	0	Parent=comp135420_c0_seq1.mrna1
Chr1	gffcl	locus	66555846	66556942	.	-	.	ID=RLOC_00008674;geneIDs=Dv_FBgn0198607.1.path2;transcripts=Dv_FBgn0198607.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	66555846	66556942	.	-	.	ID=Dv_FBgn0198607.1.mrna2;geneID=Dv_FBgn0198607.1.path2;Name=Dv_FBgn0198607.1;Dir=sensecoverage=100.0;identity=99.9;matches=878;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008674
Chr1	stalkie_big_nohaplotig	exon	66555846	66556529	99	-	.	Parent=Dv_FBgn0198607.1.mrna2;Target=Dv_FBgn0198607.1 196 879 +
Chr1	stalkie_big_nohaplotig	exon	66556612	66556707	100	-	.	Parent=Dv_FBgn0198607.1.mrna2;Target=Dv_FBgn0198607.1 100 195 +
Chr1	stalkie_big_nohaplotig	exon	66556844	66556942	100	-	.	Parent=Dv_FBgn0198607.1.mrna2;Target=Dv_FBgn0198607.1 1 99 +
Chr1	stalkie_big_nohaplotig	CDS	66555846	66556529	.	-	0	Parent=Dv_FBgn0198607.1.mrna2;Target=Dv_FBgn0198607.1 196 879 +
Chr1	stalkie_big_nohaplotig	CDS	66556612	66556707	.	-	0	Parent=Dv_FBgn0198607.1.mrna2;Target=Dv_FBgn0198607.1 100 195 +
Chr1	stalkie_big_nohaplotig	CDS	66556844	66556942	.	-	0	Parent=Dv_FBgn0198607.1.mrna2;Target=Dv_FBgn0198607.1 1 99 +
Chr1	gffcl	locus	66574818	66576839	.	+	.	ID=RLOC_00008675;geneIDs=FBgn0010452.2.path1;transcripts=FBgn0010452.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66574818	66576839	.	+	.	ID=FBgn0010452.2.mrna1;geneID=FBgn0010452.2.path1;Name=FBgn0010452.2;Dir=indeterminatecoverage=100.0;identity=99.6;matches=2014;mismatches=8;indels=0;unknowns=0;Target=FBgn0010452.2 2022 1 .;locus=RLOC_00008675
Chr1	stalkie_big_nohaplotig	exon	66574818	66576839	99	+	.	Parent=FBgn0010452.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	66574818	66576839	.	+	0	Parent=FBgn0010452.2.mrna1
Chr1	gffcl	locus	66604715	66708963	.	-	.	ID=RLOC_00008676;geneIDs=comp146387_c0_seq1.path1;transcripts=comp146387_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66604715	66708963	.	-	.	ID=comp146387_c0_seq1.mrna1;geneID=comp146387_c0_seq1.path1;Name=comp146387_c0_seq1;Dir=sensecoverage=100.0;identity=99.2;matches=1203;mismatches=8;indels=2;unknowns=0;Target=comp146387_c0_seq1 554 685 +;locus=RLOC_00008676
Chr1	stalkie_big_nohaplotig	exon	66604715	66605407	99	-	.	Parent=comp146387_c0_seq1.mrna1;Target=comp146387_c0_seq1 521 1213 +
Chr1	stalkie_big_nohaplotig	exon	66605472	66605651	96	-	.	Parent=comp146387_c0_seq1.mrna1;Target=comp146387_c0_seq1 340 520 +
Chr1	stalkie_big_nohaplotig	exon	66708626	66708963	99	-	.	Parent=comp146387_c0_seq1.mrna1;Target=comp146387_c0_seq1 1 339 +
Chr1	stalkie_big_nohaplotig	CDS	66605243	66605374	.	-	0	Parent=comp146387_c0_seq1.mrna1
Chr1	gffcl	locus	66641271	66642259	.	-	.	ID=RLOC_00008678;geneIDs=comp158233_c0_seq1.path1;transcripts=comp158233_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66641271	66642259	.	-	.	ID=comp158233_c0_seq1.mrna1;geneID=comp158233_c0_seq1.path1;Name=comp158233_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=984;mismatches=5;indels=1;unknowns=0;Target=comp158233_c0_seq1 990 1 .;CDS_Target=comp158233_c0_seq1 522 253 .;locus=RLOC_00008678
Chr1	stalkie_big_nohaplotig	exon	66641271	66642259	99	-	.	Parent=comp158233_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	66641739	66642007	.	-	0	Parent=comp158233_c0_seq1.mrna1
Chr1	gffcl	locus	66654632	66655294	.	+	.	ID=RLOC_00008679;geneIDs=FBgn0036959.1.path1;transcripts=FBgn0036959.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66654632	66655294	.	+	.	ID=FBgn0036959.1.mrna1;geneID=FBgn0036959.1.path1;Name=FBgn0036959.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=663;mismatches=0;indels=0;unknowns=0;Target=FBgn0036959.1 663 1 .;locus=RLOC_00008679
Chr1	stalkie_big_nohaplotig	exon	66654632	66655294	100	+	.	Parent=FBgn0036959.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	66654632	66655294	.	+	0	Parent=FBgn0036959.1.mrna1
Chr1	gffcl	locus	66672092	66672339	.	+	.	ID=RLOC_00008680;geneIDs=comp140565_c0_seq1.path7;transcripts=comp140565_c0_seq1.mrna7
Chr1	stalkie_big_nohaplotig	mRNA	66672092	66672339	.	+	.	ID=comp140565_c0_seq1.mrna7;geneID=comp140565_c0_seq1.path7;Name=comp140565_c0_seq1;Dir=indeterminatecoverage=99.2;identity=98.0;matches=243;mismatches=5;indels=0;unknowns=0;Target=comp140565_c0_seq1 250 3 .;CDS_Target=comp140565_c0_seq1 64 5 .;locus=RLOC_00008680
Chr1	stalkie_big_nohaplotig	exon	66672092	66672339	97	+	.	Parent=comp140565_c0_seq1.mrna7
Chr1	stalkie_big_nohaplotig	CDS	66672094	66672153	.	+	0	Parent=comp140565_c0_seq1.mrna7
Chr1	gffcl	locus	66683724	66685531	.	-	.	ID=RLOC_00008682;geneIDs=comp131660_c0_seq1.path1;transcripts=comp131660_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66683724	66685531	.	-	.	ID=comp131660_c0_seq1.mrna1;geneID=comp131660_c0_seq1.path1;Name=comp131660_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1806;mismatches=2;indels=0;unknowns=0;Target=comp131660_c0_seq1 1808 1 .;CDS_Target=comp131660_c0_seq1 601 437 .;locus=RLOC_00008682
Chr1	stalkie_big_nohaplotig	exon	66683724	66685531	99	-	.	Parent=comp131660_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	66684931	66685095	.	-	0	Parent=comp131660_c0_seq1.mrna1
Chr1	gffcl	locus	66699527	66707198	.	+	.	ID=RLOC_00008683;geneIDs=comp138167_c2_seq1.path1;transcripts=comp138167_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66699527	66707198	.	+	.	ID=comp138167_c2_seq1.mrna1;geneID=comp138167_c2_seq1.path1;Name=comp138167_c2_seq1;Dir=indeterminatecoverage=95.4;identity=100.0;matches=2328;mismatches=0;indels=0;unknowns=0;Target=comp138167_c2_seq1 494 354 .;locus=RLOC_00008683
Chr1	stalkie_big_nohaplotig	exon	66699527	66699528	100	+	.	Parent=comp138167_c2_seq1.mrna1;Target=comp138167_c2_seq1 115 114 .
Chr1	stalkie_big_nohaplotig	exon	66704873	66707198	100	+	.	Parent=comp138167_c2_seq1.mrna1;Target=comp138167_c2_seq1 2441 116 .
Chr1	stalkie_big_nohaplotig	CDS	66705111	66705251	.	+	0	Parent=comp138167_c2_seq1.mrna1
Chr1	gffcl	locus	66755844	66755904	.	+	.	ID=RLOC_00008684;geneIDs=comp143340_c0_seq1.path2;transcripts=comp143340_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	66755844	66755904	.	+	.	ID=comp143340_c0_seq1.mrna2;geneID=comp143340_c0_seq1.path2;Name=comp143340_c0_seq1;Dir=indeterminatecoverage=14.0;identity=100.0;matches=61;mismatches=0;indels=0;unknowns=0;Target=comp143340_c0_seq1 437 377 .;locus=RLOC_00008684
Chr1	stalkie_big_nohaplotig	exon	66755844	66755904	100	+	.	Parent=comp143340_c0_seq1.mrna2
Chr1	gffcl	locus	66761666	66768752	.	+	.	ID=RLOC_00008685;geneIDs=comp285395_c0_seq1.path1;transcripts=comp285395_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66761666	66768752	.	+	.	ID=comp285395_c0_seq1.mrna1;geneID=comp285395_c0_seq1.path1;Name=comp285395_c0_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=327;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008685
Chr1	stalkie_big_nohaplotig	exon	66761666	66761698	100	+	.	Parent=comp285395_c0_seq1.mrna1;Target=comp285395_c0_seq1 1 33 +
Chr1	stalkie_big_nohaplotig	exon	66768457	66768752	99	+	.	Parent=comp285395_c0_seq1.mrna1;Target=comp285395_c0_seq1 34 329 +
Chr1	stalkie_big_nohaplotig	CDS	66761666	66761698	.	+	0	Parent=comp285395_c0_seq1.mrna1;Target=comp285395_c0_seq1 1 33 +
Chr1	stalkie_big_nohaplotig	CDS	66768457	66768543	.	+	0	Parent=comp285395_c0_seq1.mrna1;Target=comp285395_c0_seq1 34 120 +
Chr1	gffcl	locus	66768792	66769840	.	-	.	ID=RLOC_00008686;geneIDs=comp156365_c0_seq1.path1;transcripts=comp156365_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66768792	66769840	.	-	.	ID=comp156365_c0_seq1.mrna1;geneID=comp156365_c0_seq1.path1;Name=comp156365_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1047;mismatches=2;indels=0;unknowns=0;Target=comp156365_c0_seq1 1049 1 .;CDS_Target=comp156365_c0_seq1 39 1 .;locus=RLOC_00008686
Chr1	stalkie_big_nohaplotig	exon	66768792	66769840	99	-	.	Parent=comp156365_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	66769802	66769840	.	-	0	Parent=comp156365_c0_seq1.mrna1
Chr1	gffcl	locus	66871876	66908993	.	+	.	ID=RLOC_00008687;geneIDs=comp151986_c0_seq1.path1;transcripts=comp151986_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66871876	66908993	.	+	.	ID=comp151986_c0_seq1.mrna1;geneID=comp151986_c0_seq1.path1;Name=comp151986_c0_seq1;Dir=indeterminatecoverage=72.9;identity=98.6;matches=903;mismatches=12;indels=1;unknowns=0;Target=comp151986_c0_seq1 575 489 .;locus=RLOC_00008687
Chr1	stalkie_big_nohaplotig	exon	66871876	66871877	100	+	.	Parent=comp151986_c0_seq1.mrna1;Target=comp151986_c0_seq1 342 341 .
Chr1	stalkie_big_nohaplotig	exon	66879046	66879047	100	+	.	Parent=comp151986_c0_seq1.mrna1;Target=comp151986_c0_seq1 344 343 .
Chr1	stalkie_big_nohaplotig	exon	66884424	66884427	100	+	.	Parent=comp151986_c0_seq1.mrna1;Target=comp151986_c0_seq1 348 345 .
Chr1	stalkie_big_nohaplotig	exon	66892545	66892548	100	+	.	Parent=comp151986_c0_seq1.mrna1;Target=comp151986_c0_seq1 352 349 .
Chr1	stalkie_big_nohaplotig	exon	66908090	66908993	98	+	.	Parent=comp151986_c0_seq1.mrna1;Target=comp151986_c0_seq1 1255 353 .
Chr1	stalkie_big_nohaplotig	CDS	66908227	66908313	.	+	0	Parent=comp151986_c0_seq1.mrna1
Chr1	gffcl	locus	66909484	66910165	.	-	.	ID=RLOC_00008688;geneIDs=comp73433_c0_seq1.path1;transcripts=comp73433_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66909484	66910165	.	-	.	ID=comp73433_c0_seq1.mrna1;geneID=comp73433_c0_seq1.path1;Name=comp73433_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.9;matches=681;mismatches=1;indels=0;unknowns=0;Target=comp73433_c0_seq1 682 1 .;CDS_Target=comp73433_c0_seq1 661 365 .;locus=RLOC_00008688
Chr1	stalkie_big_nohaplotig	exon	66909484	66910165	99	-	.	Parent=comp73433_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	66909505	66909801	.	-	0	Parent=comp73433_c0_seq1.mrna1
Chr1	gffcl	locus	66930295	66931403	.	-	.	ID=RLOC_00008689;geneIDs=ORF2128.path1;transcripts=ORF2128.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66930295	66931403	.	-	.	ID=ORF2128.mrna1;geneID=ORF2128.path1;Name=ORF2128;Dir=sensecoverage=99.9;identity=99.1;matches=903;mismatches=8;indels=0;unknowns=0;locus=RLOC_00008689
Chr1	stalkie_big_nohaplotig	exon	66930295	66930349	100	-	.	Parent=ORF2128.mrna1;Target=ORF2128 858 912 +
Chr1	stalkie_big_nohaplotig	exon	66930417	66930527	99	-	.	Parent=ORF2128.mrna1;Target=ORF2128 747 857 +
Chr1	stalkie_big_nohaplotig	exon	66930594	66931175	98	-	.	Parent=ORF2128.mrna1;Target=ORF2128 165 746 +
Chr1	stalkie_big_nohaplotig	exon	66931241	66931403	100	-	.	Parent=ORF2128.mrna1;Target=ORF2128 2 164 +
Chr1	stalkie_big_nohaplotig	CDS	66930295	66930349	.	-	1	Parent=ORF2128.mrna1;Target=ORF2128 858 912 +
Chr1	stalkie_big_nohaplotig	CDS	66930417	66930527	.	-	1	Parent=ORF2128.mrna1;Target=ORF2128 747 857 +
Chr1	stalkie_big_nohaplotig	CDS	66930594	66931175	.	-	1	Parent=ORF2128.mrna1;Target=ORF2128 165 746 +
Chr1	stalkie_big_nohaplotig	CDS	66931241	66931401	.	-	0	Parent=ORF2128.mrna1;Target=ORF2128 4 164 +
Chr1	gffcl	locus	66989915	66990847	.	+	.	ID=RLOC_00008690;geneIDs=comp141713_c0_seq1.path1;transcripts=comp141713_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	66989915	66990847	.	+	.	ID=comp141713_c0_seq1.mrna1;geneID=comp141713_c0_seq1.path1;Name=comp141713_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.8;matches=931;mismatches=2;indels=9;unknowns=0;Target=comp141713_c0_seq1 943 2 .;CDS_Target=comp141713_c0_seq1 528 331 .;locus=RLOC_00008690
Chr1	stalkie_big_nohaplotig	exon	66989915	66990847	98	+	.	Parent=comp141713_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	66990244	66990441	.	+	0	Parent=comp141713_c0_seq1.mrna1
Chr1	gffcl	locus	67017968	67019065	.	-	.	ID=RLOC_00008691;geneIDs=FBgn0036351.1.path1;transcripts=FBgn0036351.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67017968	67019065	.	-	.	ID=FBgn0036351.1.mrna1;geneID=FBgn0036351.1.path1;Name=FBgn0036351.1;Dir=sensecoverage=100.0;identity=99.7;matches=927;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008691
Chr1	stalkie_big_nohaplotig	exon	67017968	67018779	99	-	.	Parent=FBgn0036351.1.mrna1;Target=FBgn0036351.1 119 930 +
Chr1	stalkie_big_nohaplotig	exon	67018857	67018954	100	-	.	Parent=FBgn0036351.1.mrna1;Target=FBgn0036351.1 21 118 +
Chr1	stalkie_big_nohaplotig	exon	67019046	67019065	100	-	.	Parent=FBgn0036351.1.mrna1;Target=FBgn0036351.1 1 20 +
Chr1	stalkie_big_nohaplotig	CDS	67017968	67018779	.	-	2	Parent=FBgn0036351.1.mrna1;Target=FBgn0036351.1 119 930 +
Chr1	stalkie_big_nohaplotig	CDS	67018857	67018954	.	-	1	Parent=FBgn0036351.1.mrna1;Target=FBgn0036351.1 21 118 +
Chr1	stalkie_big_nohaplotig	CDS	67019046	67019065	.	-	0	Parent=FBgn0036351.1.mrna1;Target=FBgn0036351.1 1 20 +
Chr1	gffcl	locus	67029115	67029760	.	+	.	ID=RLOC_00008692;geneIDs=FBgn0001256.path1;transcripts=FBgn0001256.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67029115	67029760	.	+	.	ID=FBgn0001256.mrna1;geneID=FBgn0001256.path1;Name=FBgn0001256;Dir=sensecoverage=100.0;identity=98.6;matches=574;mismatches=7;indels=1;unknowns=0;locus=RLOC_00008692
Chr1	stalkie_big_nohaplotig	exon	67029115	67029181	97	+	.	Parent=FBgn0001256.mrna1;Target=FBgn0001256 1 67 +
Chr1	stalkie_big_nohaplotig	exon	67029247	67029760	98	+	.	Parent=FBgn0001256.mrna1;Target=FBgn0001256 68 582 +
Chr1	stalkie_big_nohaplotig	CDS	67029115	67029181	.	+	0	Parent=FBgn0001256.mrna1;Target=FBgn0001256 1 67 +
Chr1	stalkie_big_nohaplotig	CDS	67029247	67029760	.	+	2	Parent=FBgn0001256.mrna1;Target=FBgn0001256 68 582 +
Chr1	gffcl	locus	67034621	67035882	.	-	.	ID=RLOC_00008693;geneIDs=FBgn0036353.1.path1;transcripts=FBgn0036353.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67034621	67035882	.	-	.	ID=FBgn0036353.1.mrna1;geneID=FBgn0036353.1.path1;Name=FBgn0036353.1;Dir=sensecoverage=100.0;identity=99.4;matches=1071;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008693
Chr1	stalkie_big_nohaplotig	exon	67034621	67035099	99	-	.	Parent=FBgn0036353.1.mrna1;Target=FBgn0036353.1 599 1077 +
Chr1	stalkie_big_nohaplotig	exon	67035154	67035306	98	-	.	Parent=FBgn0036353.1.mrna1;Target=FBgn0036353.1 446 598 +
Chr1	stalkie_big_nohaplotig	exon	67035361	67035609	100	-	.	Parent=FBgn0036353.1.mrna1;Target=FBgn0036353.1 197 445 +
Chr1	stalkie_big_nohaplotig	exon	67035687	67035882	99	-	.	Parent=FBgn0036353.1.mrna1;Target=FBgn0036353.1 1 196 +
Chr1	stalkie_big_nohaplotig	CDS	67034621	67035099	.	-	2	Parent=FBgn0036353.1.mrna1;Target=FBgn0036353.1 599 1077 +
Chr1	stalkie_big_nohaplotig	CDS	67035154	67035306	.	-	2	Parent=FBgn0036353.1.mrna1;Target=FBgn0036353.1 446 598 +
Chr1	stalkie_big_nohaplotig	CDS	67035361	67035609	.	-	2	Parent=FBgn0036353.1.mrna1;Target=FBgn0036353.1 197 445 +
Chr1	stalkie_big_nohaplotig	CDS	67035687	67035882	.	-	0	Parent=FBgn0036353.1.mrna1;Target=FBgn0036353.1 1 196 +
Chr1	gffcl	locus	67038685	67040191	.	+	.	ID=RLOC_00008694;geneIDs=FBgn0040075.1.path1;transcripts=FBgn0040075.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67038685	67040191	.	+	.	ID=FBgn0040075.1.mrna1;geneID=FBgn0040075.1.path1;Name=FBgn0040075.1;Dir=sensecoverage=100.0;identity=99.4;matches=1443;mismatches=9;indels=0;unknowns=0;locus=RLOC_00008694
Chr1	stalkie_big_nohaplotig	exon	67038685	67039176	98	+	.	Parent=FBgn0040075.1.mrna1;Target=FBgn0040075.1 1 492 +
Chr1	stalkie_big_nohaplotig	exon	67039232	67040191	99	+	.	Parent=FBgn0040075.1.mrna1;Target=FBgn0040075.1 493 1452 +
Chr1	stalkie_big_nohaplotig	CDS	67038685	67039176	.	+	0	Parent=FBgn0040075.1.mrna1;Target=FBgn0040075.1 1 492 +
Chr1	stalkie_big_nohaplotig	CDS	67039232	67040191	.	+	0	Parent=FBgn0040075.1.mrna1;Target=FBgn0040075.1 493 1452 +
Chr1	gffcl	locus	67041354	67042990	.	-	.	ID=RLOC_00008695;geneIDs=FBgn0026630.1.path1;transcripts=FBgn0026630.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67041354	67042990	.	-	.	ID=FBgn0026630.1.mrna1;geneID=FBgn0026630.1.path1;Name=FBgn0026630.1;Dir=sensecoverage=100.0;identity=99.7;matches=1451;mismatches=4;indels=0;unknowns=0;locus=RLOC_00008695
Chr1	stalkie_big_nohaplotig	exon	67041354	67041677	99	-	.	Parent=FBgn0026630.1.mrna1;Target=FBgn0026630.1 1132 1455 +
Chr1	stalkie_big_nohaplotig	exon	67041735	67042027	99	-	.	Parent=FBgn0026630.1.mrna1;Target=FBgn0026630.1 839 1131 +
Chr1	stalkie_big_nohaplotig	exon	67042082	67042819	99	-	.	Parent=FBgn0026630.1.mrna1;Target=FBgn0026630.1 101 838 +
Chr1	stalkie_big_nohaplotig	exon	67042891	67042990	100	-	.	Parent=FBgn0026630.1.mrna1;Target=FBgn0026630.1 1 100 +
Chr1	stalkie_big_nohaplotig	CDS	67041354	67041677	.	-	0	Parent=FBgn0026630.1.mrna1;Target=FBgn0026630.1 1132 1455 +
Chr1	stalkie_big_nohaplotig	CDS	67041735	67042027	.	-	2	Parent=FBgn0026630.1.mrna1;Target=FBgn0026630.1 839 1131 +
Chr1	stalkie_big_nohaplotig	CDS	67042082	67042819	.	-	2	Parent=FBgn0026630.1.mrna1;Target=FBgn0026630.1 101 838 +
Chr1	stalkie_big_nohaplotig	CDS	67042891	67042990	.	-	0	Parent=FBgn0026630.1.mrna1;Target=FBgn0026630.1 1 100 +
Chr1	gffcl	locus	67043010	67043701	.	-	.	ID=RLOC_00008696;geneIDs=comp153491_c0_seq1.path1;transcripts=comp153491_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67043010	67043701	.	-	.	ID=comp153491_c0_seq1.mrna1;geneID=comp153491_c0_seq1.path1;Name=comp153491_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=684;mismatches=0;indels=15;unknowns=0;Target=comp153491_c0_seq1 691 1 .;CDS_Target=comp153491_c0_seq1 152 84 .;locus=RLOC_00008696
Chr1	stalkie_big_nohaplotig	exon	67043010	67043701	97	-	.	Parent=comp153491_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67043550	67043618	.	-	0	Parent=comp153491_c0_seq1.mrna1
Chr1	gffcl	locus	67045991	67046356	.	+	.	ID=RLOC_00008697;geneIDs=FBgn0260857.1.path1;transcripts=FBgn0260857.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67045991	67046356	.	+	.	ID=FBgn0260857.1.mrna1;geneID=FBgn0260857.1.path1;Name=FBgn0260857.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=366;mismatches=0;indels=0;unknowns=0;Target=FBgn0260857.1 366 1 .;locus=RLOC_00008697
Chr1	stalkie_big_nohaplotig	exon	67045991	67046356	100	+	.	Parent=FBgn0260857.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67045991	67046356	.	+	0	Parent=FBgn0260857.1.mrna1
Chr1	gffcl	locus	67046570	67047673	.	-	.	ID=RLOC_00008698;geneIDs=FBgn0017578.1.path1;transcripts=FBgn0017578.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67046570	67047673	.	-	.	ID=FBgn0017578.1.mrna1;geneID=FBgn0017578.1.path1;Name=FBgn0017578.1;Dir=sensecoverage=100.0;identity=100.0;matches=519;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008698
Chr1	stalkie_big_nohaplotig	exon	67046570	67046727	100	-	.	Parent=FBgn0017578.1.mrna1;Target=FBgn0017578.1 362 519 +
Chr1	stalkie_big_nohaplotig	exon	67046785	67046908	100	-	.	Parent=FBgn0017578.1.mrna1;Target=FBgn0017578.1 238 361 +
Chr1	stalkie_big_nohaplotig	exon	67046975	67047085	100	-	.	Parent=FBgn0017578.1.mrna1;Target=FBgn0017578.1 127 237 +
Chr1	stalkie_big_nohaplotig	exon	67047492	67047557	100	-	.	Parent=FBgn0017578.1.mrna1;Target=FBgn0017578.1 61 126 +
Chr1	stalkie_big_nohaplotig	exon	67047614	67047673	100	-	.	Parent=FBgn0017578.1.mrna1;Target=FBgn0017578.1 1 60 +
Chr1	stalkie_big_nohaplotig	CDS	67046570	67046727	.	-	2	Parent=FBgn0017578.1.mrna1;Target=FBgn0017578.1 362 519 +
Chr1	stalkie_big_nohaplotig	CDS	67046785	67046908	.	-	0	Parent=FBgn0017578.1.mrna1;Target=FBgn0017578.1 238 361 +
Chr1	stalkie_big_nohaplotig	CDS	67046975	67047085	.	-	0	Parent=FBgn0017578.1.mrna1;Target=FBgn0017578.1 127 237 +
Chr1	stalkie_big_nohaplotig	CDS	67047492	67047557	.	-	0	Parent=FBgn0017578.1.mrna1;Target=FBgn0017578.1 61 126 +
Chr1	stalkie_big_nohaplotig	CDS	67047614	67047673	.	-	0	Parent=FBgn0017578.1.mrna1;Target=FBgn0017578.1 1 60 +
Chr1	gffcl	locus	67057613	67058071	.	+	.	ID=RLOC_00008699;geneIDs=comp132907_c2_seq1.path1;transcripts=comp132907_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67057613	67058071	.	+	.	ID=comp132907_c2_seq1.mrna1;geneID=comp132907_c2_seq1.path1;Name=comp132907_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=457;mismatches=2;indels=1;unknowns=0;Target=comp132907_c2_seq1 460 1 .;CDS_Target=comp132907_c2_seq1 276 232 .;locus=RLOC_00008699
Chr1	stalkie_big_nohaplotig	exon	67057613	67058071	99	+	.	Parent=comp132907_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67057844	67057887	.	+	0	Parent=comp132907_c2_seq1.mrna1
Chr1	gffcl	locus	67075462	67076539	.	+	.	ID=RLOC_00008700;geneIDs=comp156698_c2_seq1.path1;transcripts=comp156698_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67075462	67076539	.	+	.	ID=comp156698_c2_seq1.mrna1;geneID=comp156698_c2_seq1.path1;Name=comp156698_c2_seq1;Dir=indeterminatecoverage=99.9;identity=98.3;matches=1060;mismatches=18;indels=0;unknowns=0;Target=comp156698_c2_seq1 1079 2 .;CDS_Target=comp156698_c2_seq1 792 565 .;locus=RLOC_00008700
Chr1	stalkie_big_nohaplotig	exon	67075462	67076539	98	+	.	Parent=comp156698_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67076025	67076252	.	+	0	Parent=comp156698_c2_seq1.mrna1
Chr1	gffcl	locus	67085494	67086471	.	-	.	ID=RLOC_00008701;geneIDs=FBgn0040322.1.path1;transcripts=FBgn0040322.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67085494	67086471	.	-	.	ID=FBgn0040322.1.mrna1;geneID=FBgn0040322.1.path1;Name=FBgn0040322.1;Dir=sensecoverage=82.2;identity=99.6;matches=843;mismatches=2;indels=1;unknowns=0;Target=FBgn0040322.1 3 41 +;locus=RLOC_00008701
Chr1	stalkie_big_nohaplotig	exon	67085494	67085804	100	-	.	Parent=FBgn0040322.1.mrna1;Target=FBgn0040322.1 536 846 +
Chr1	stalkie_big_nohaplotig	exon	67085878	67086044	100	-	.	Parent=FBgn0040322.1.mrna1;Target=FBgn0040322.1 369 535 +
Chr1	stalkie_big_nohaplotig	exon	67086105	67086471	99	-	.	Parent=FBgn0040322.1.mrna1;Target=FBgn0040322.1 1 368 +
Chr1	stalkie_big_nohaplotig	CDS	67086432	67086469	.	-	0	Parent=FBgn0040322.1.mrna1
Chr1	gffcl	locus	67091417	67094109	.	-	.	ID=RLOC_00008702;geneIDs=FBgn0040323.1.path1,comp145952_c0_seq1.path1;transcripts=FBgn0040323.1.mrna1,comp145952_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67091417	67094109	.	-	.	ID=FBgn0040323.1.mrna1;geneID=FBgn0040323.1.path1;Name=FBgn0040323.1;Dir=sensecoverage=100.0;identity=99.9;matches=1609;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008702
Chr1	stalkie_big_nohaplotig	exon	67091417	67091611	100	-	.	Parent=FBgn0040323.1.mrna1;Target=FBgn0040323.1 1417 1611 +
Chr1	stalkie_big_nohaplotig	exon	67092321	67092706	100	-	.	Parent=FBgn0040323.1.mrna1;Target=FBgn0040323.1 1031 1416 +
Chr1	stalkie_big_nohaplotig	exon	67092762	67092937	100	-	.	Parent=FBgn0040323.1.mrna1;Target=FBgn0040323.1 855 1030 +
Chr1	stalkie_big_nohaplotig	exon	67092999	67093713	99	-	.	Parent=FBgn0040323.1.mrna1;Target=FBgn0040323.1 140 854 +
Chr1	stalkie_big_nohaplotig	exon	67093971	67094109	100	-	.	Parent=FBgn0040323.1.mrna1;Target=FBgn0040323.1 1 139 +
Chr1	stalkie_big_nohaplotig	CDS	67091417	67091611	.	-	0	Parent=FBgn0040323.1.mrna1;Target=FBgn0040323.1 1417 1611 +
Chr1	stalkie_big_nohaplotig	CDS	67092321	67092706	.	-	2	Parent=FBgn0040323.1.mrna1;Target=FBgn0040323.1 1031 1416 +
Chr1	stalkie_big_nohaplotig	CDS	67092762	67092937	.	-	1	Parent=FBgn0040323.1.mrna1;Target=FBgn0040323.1 855 1030 +
Chr1	stalkie_big_nohaplotig	CDS	67092999	67093713	.	-	2	Parent=FBgn0040323.1.mrna1;Target=FBgn0040323.1 140 854 +
Chr1	stalkie_big_nohaplotig	CDS	67093971	67094109	.	-	0	Parent=FBgn0040323.1.mrna1;Target=FBgn0040323.1 1 139 +
Chr1	stalkie_big_nohaplotig	mRNA	67091591	67092014	.	-	.	ID=comp145952_c0_seq1.mrna1;geneID=comp145952_c0_seq1.path1;Name=comp145952_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=424;mismatches=0;indels=0;unknowns=0;Target=comp145952_c0_seq1 424 1 .;CDS_Target=comp145952_c0_seq1 201 79 .;locus=RLOC_00008702
Chr1	stalkie_big_nohaplotig	exon	67091591	67092014	100	-	.	Parent=comp145952_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67091814	67091936	.	-	0	Parent=comp145952_c0_seq1.mrna1
Chr1	gffcl	locus	67099811	67100531	.	-	.	ID=RLOC_00008703;geneIDs=FBgn0036804.1.path1;transcripts=FBgn0036804.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67099811	67100531	.	-	.	ID=FBgn0036804.1.mrna1;geneID=FBgn0036804.1.path1;Name=FBgn0036804.1;Dir=indeterminatecoverage=97.7;identity=99.9;matches=720;mismatches=1;indels=0;unknowns=0;Target=FBgn0036804.1 721 1 .;CDS_Target=FBgn0036804.1 720 1 .;locus=RLOC_00008703
Chr1	stalkie_big_nohaplotig	exon	67099811	67100531	99	-	.	Parent=FBgn0036804.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67099812	67100531	.	-	0	Parent=FBgn0036804.1.mrna1
Chr1	gffcl	locus	67104875	67105395	.	-	.	ID=RLOC_00008704;geneIDs=FBgn0036805.1.path1;transcripts=FBgn0036805.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67104875	67105395	.	-	.	ID=FBgn0036805.1.mrna1;geneID=FBgn0036805.1.path1;Name=FBgn0036805.1;Dir=sensecoverage=100.0;identity=99.6;matches=460;mismatches=1;indels=1;unknowns=0;Target=FBgn0036805.1 3 71 +;locus=RLOC_00008704
Chr1	stalkie_big_nohaplotig	exon	67104875	67104995	100	-	.	Parent=FBgn0036805.1.mrna1;Target=FBgn0036805.1 342 462 +
Chr1	stalkie_big_nohaplotig	exon	67105056	67105395	99	-	.	Parent=FBgn0036805.1.mrna1;Target=FBgn0036805.1 1 341 +
Chr1	stalkie_big_nohaplotig	CDS	67105326	67105393	.	-	0	Parent=FBgn0036805.1.mrna1
Chr1	gffcl	locus	67106629	67107763	.	-	.	ID=RLOC_00008705;geneIDs=comp153732_c0_seq1.path1;transcripts=comp153732_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67106629	67107763	.	-	.	ID=comp153732_c0_seq1.mrna1;geneID=comp153732_c0_seq1.path1;Name=comp153732_c0_seq1;Dir=indeterminatecoverage=98.4;identity=97.8;matches=1110;mismatches=24;indels=1;unknowns=0;Target=comp153732_c0_seq1 1134 1 .;CDS_Target=comp153732_c0_seq1 754 554 .;locus=RLOC_00008705
Chr1	stalkie_big_nohaplotig	exon	67106629	67107763	97	-	.	Parent=comp153732_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67107009	67107209	.	-	0	Parent=comp153732_c0_seq1.mrna1
Chr1	gffcl	locus	67116766	67122483	.	+	.	ID=RLOC_00008706;geneIDs=ORF1608.path1;transcripts=ORF1608.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67116766	67122483	.	+	.	ID=ORF1608.mrna1;geneID=ORF1608.path1;Name=ORF1608;Dir=sensecoverage=100.0;identity=99.5;matches=1042;mismatches=4;indels=1;unknowns=0;locus=RLOC_00008706
Chr1	stalkie_big_nohaplotig	exon	67116766	67116855	100	+	.	Parent=ORF1608.mrna1;Target=ORF1608 1 90 +
Chr1	stalkie_big_nohaplotig	exon	67120452	67120508	98	+	.	Parent=ORF1608.mrna1;Target=ORF1608 91 147 +
Chr1	stalkie_big_nohaplotig	exon	67120566	67120637	100	+	.	Parent=ORF1608.mrna1;Target=ORF1608 148 219 +
Chr1	stalkie_big_nohaplotig	exon	67121657	67122483	99	+	.	Parent=ORF1608.mrna1;Target=ORF1608 220 1047 +
Chr1	stalkie_big_nohaplotig	CDS	67116766	67116855	.	+	0	Parent=ORF1608.mrna1;Target=ORF1608 1 90 +
Chr1	stalkie_big_nohaplotig	CDS	67120452	67120508	.	+	0	Parent=ORF1608.mrna1;Target=ORF1608 91 147 +
Chr1	stalkie_big_nohaplotig	CDS	67120566	67120637	.	+	0	Parent=ORF1608.mrna1;Target=ORF1608 148 219 +
Chr1	stalkie_big_nohaplotig	CDS	67121657	67122483	.	+	0	Parent=ORF1608.mrna1;Target=ORF1608 220 1047 +
Chr1	gffcl	locus	67122490	67122733	.	-	.	ID=RLOC_00008707;geneIDs=comp151206_c0_seq1.path1;transcripts=comp151206_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67122490	67122733	.	-	.	ID=comp151206_c0_seq1.mrna1;geneID=comp151206_c0_seq1.path1;Name=comp151206_c0_seq1;Dir=indeterminatecoverage=90.7;identity=98.4;matches=240;mismatches=4;indels=0;unknowns=0;Target=comp151206_c0_seq1 269 26 .;CDS_Target=comp151206_c0_seq1 147 28 .;locus=RLOC_00008707
Chr1	stalkie_big_nohaplotig	exon	67122490	67122733	98	-	.	Parent=comp151206_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67122612	67122731	.	-	0	Parent=comp151206_c0_seq1.mrna1
Chr1	gffcl	locus	67181489	67182497	.	-	.	ID=RLOC_00008708;geneIDs=ORF2914.path1;transcripts=ORF2914.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67181489	67182497	.	-	.	ID=ORF2914.mrna1;geneID=ORF2914.path1;Name=ORF2914;Dir=sensecoverage=100.0;identity=99.6;matches=786;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008708
Chr1	stalkie_big_nohaplotig	exon	67181489	67182223	99	-	.	Parent=ORF2914.mrna1;Target=ORF2914 55 789 +
Chr1	stalkie_big_nohaplotig	exon	67182444	67182497	100	-	.	Parent=ORF2914.mrna1;Target=ORF2914 1 54 +
Chr1	stalkie_big_nohaplotig	CDS	67181489	67182223	.	-	0	Parent=ORF2914.mrna1;Target=ORF2914 55 789 +
Chr1	stalkie_big_nohaplotig	CDS	67182444	67182497	.	-	0	Parent=ORF2914.mrna1;Target=ORF2914 1 54 +
Chr1	gffcl	locus	67286227	67287304	.	-	.	ID=RLOC_00008709;geneIDs=comp156698_c2_seq1.path2;transcripts=comp156698_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	67286227	67287304	.	-	.	ID=comp156698_c2_seq1.mrna2;geneID=comp156698_c2_seq1.path2;Name=comp156698_c2_seq1;Dir=indeterminatecoverage=99.9;identity=98.3;matches=1060;mismatches=18;indels=0;unknowns=0;Target=comp156698_c2_seq1 1079 2 .;CDS_Target=comp156698_c2_seq1 792 565 .;locus=RLOC_00008709
Chr1	stalkie_big_nohaplotig	exon	67286227	67287304	98	-	.	Parent=comp156698_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	67286514	67286741	.	-	0	Parent=comp156698_c2_seq1.mrna2
Chr1	gffcl	locus	67343464	67344723	.	+	.	ID=RLOC_00008710;geneIDs=FBgn0039711.2.path1;transcripts=FBgn0039711.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67343464	67344723	.	+	.	ID=FBgn0039711.2.mrna1;geneID=FBgn0039711.2.path1;Name=FBgn0039711.2;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1259;mismatches=1;indels=0;unknowns=0;Target=FBgn0039711.2 1260 1 .;locus=RLOC_00008710
Chr1	stalkie_big_nohaplotig	exon	67343464	67344723	99	+	.	Parent=FBgn0039711.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67343464	67344723	.	+	0	Parent=FBgn0039711.2.mrna1
Chr1	gffcl	locus	67375240	67394948	.	+	.	ID=RLOC_00008711;geneIDs=FBgn0036542.1.path1;transcripts=FBgn0036542.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67375240	67394948	.	+	.	ID=FBgn0036542.1.mrna1;geneID=FBgn0036542.1.path1;Name=FBgn0036542.1;Dir=sensecoverage=98.7;identity=99.9;matches=2288;mismatches=1;indels=1;unknowns=0;Target=FBgn0036542.1 30 80 +;locus=RLOC_00008711
Chr1	stalkie_big_nohaplotig	exon	67375240	67376417	99	+	.	Parent=FBgn0036542.1.mrna1;Target=FBgn0036542.1 30 1208 +
Chr1	stalkie_big_nohaplotig	exon	67376702	67376722	100	+	.	Parent=FBgn0036542.1.mrna1;Target=FBgn0036542.1 1209 1229 +
Chr1	stalkie_big_nohaplotig	exon	67379060	67379148	100	+	.	Parent=FBgn0036542.1.mrna1;Target=FBgn0036542.1 1230 1318 +
Chr1	stalkie_big_nohaplotig	exon	67382183	67382257	100	+	.	Parent=FBgn0036542.1.mrna1;Target=FBgn0036542.1 1319 1393 +
Chr1	stalkie_big_nohaplotig	exon	67382514	67382578	100	+	.	Parent=FBgn0036542.1.mrna1;Target=FBgn0036542.1 1394 1458 +
Chr1	stalkie_big_nohaplotig	exon	67382688	67382908	100	+	.	Parent=FBgn0036542.1.mrna1;Target=FBgn0036542.1 1459 1679 +
Chr1	stalkie_big_nohaplotig	exon	67384355	67384437	100	+	.	Parent=FBgn0036542.1.mrna1;Target=FBgn0036542.1 1680 1762 +
Chr1	stalkie_big_nohaplotig	exon	67384566	67384703	100	+	.	Parent=FBgn0036542.1.mrna1;Target=FBgn0036542.1 1763 1900 +
Chr1	stalkie_big_nohaplotig	exon	67386929	67387081	100	+	.	Parent=FBgn0036542.1.mrna1;Target=FBgn0036542.1 1901 2053 +
Chr1	stalkie_big_nohaplotig	exon	67391359	67391573	100	+	.	Parent=FBgn0036542.1.mrna1;Target=FBgn0036542.1 2054 2268 +
Chr1	stalkie_big_nohaplotig	exon	67394898	67394948	98	+	.	Parent=FBgn0036542.1.mrna1;Target=FBgn0036542.1 2269 2319 +
Chr1	stalkie_big_nohaplotig	CDS	67375240	67375289	.	+	0	Parent=FBgn0036542.1.mrna1
Chr1	gffcl	locus	67400589	67401184	.	+	.	ID=RLOC_00008712;geneIDs=comp147649_c0_seq1.path1;transcripts=comp147649_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67400589	67401184	.	+	.	ID=comp147649_c0_seq1.mrna1;geneID=comp147649_c0_seq1.path1;Name=comp147649_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=589;mismatches=7;indels=1;unknowns=0;Target=comp147649_c0_seq1 597 1 .;CDS_Target=comp147649_c0_seq1 119 27 .;locus=RLOC_00008712
Chr1	stalkie_big_nohaplotig	exon	67400589	67401184	98	+	.	Parent=comp147649_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67400615	67400707	.	+	0	Parent=comp147649_c0_seq1.mrna1
Chr1	gffcl	locus	67404334	67405499	.	-	.	ID=RLOC_00008713;geneIDs=comp154624_c0_seq1.path1;transcripts=comp154624_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67404334	67405499	.	-	.	ID=comp154624_c0_seq1.mrna1;geneID=comp154624_c0_seq1.path1;Name=comp154624_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.6;matches=1161;mismatches=5;indels=0;unknowns=0;Target=comp154624_c0_seq1 1166 1 .;CDS_Target=comp154624_c0_seq1 948 781 .;locus=RLOC_00008713
Chr1	stalkie_big_nohaplotig	exon	67404334	67405499	99	-	.	Parent=comp154624_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67404552	67404719	.	-	0	Parent=comp154624_c0_seq1.mrna1
Chr1	gffcl	locus	67411064	67413978	.	-	.	ID=RLOC_00008714;geneIDs=comp151193_c0_seq1.path1,comp152676_c0_seq1.path1,comp162010_c0_seq1.path2;transcripts=comp162010_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	67411584	67413088	.	-	.	ID=comp162010_c0_seq1.mrna2;geneID=comp162010_c0_seq1.path2;Name=comp162010_c0_seq1;Dir=indeterminatecoverage=96.8;identity=98.3;matches=1487;mismatches=18;indels=8;unknowns=0;Target=comp162010_c0_seq1 1563 51 .;CDS_Target=comp162010_c0_seq1 1563 1447 .;locus=RLOC_00008714
Chr1	stalkie_big_nohaplotig	exon	67411584	67413088	98	-	.	Parent=comp162010_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	67411584	67411698	.	-	0	Parent=comp162010_c0_seq1.mrna2
Chr1	gffcl	locus	67416826	67417654	.	-	.	ID=RLOC_00008715;geneIDs=comp155580_c0_seq1.path1;transcripts=comp155580_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67416826	67417654	.	-	.	ID=comp155580_c0_seq1.mrna1;geneID=comp155580_c0_seq1.path1;Name=comp155580_c0_seq1;Dir=indeterminatecoverage=98.0;identity=99.9;matches=828;mismatches=1;indels=0;unknowns=0;Target=comp155580_c0_seq1 846 18 .;CDS_Target=comp155580_c0_seq1 104 18 .;locus=RLOC_00008715
Chr1	stalkie_big_nohaplotig	exon	67416826	67417654	99	-	.	Parent=comp155580_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67417568	67417654	.	-	0	Parent=comp155580_c0_seq1.mrna1
Chr1	gffcl	locus	67429105	67430212	.	+	.	ID=RLOC_00008716;geneIDs=comp160054_c0_seq1.path1;transcripts=comp160054_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67429105	67430212	.	+	.	ID=comp160054_c0_seq1.mrna1;geneID=comp160054_c0_seq1.path1;Name=comp160054_c0_seq1;Dir=indeterminatecoverage=99.6;identity=97.3;matches=1078;mismatches=29;indels=1;unknowns=0;Target=comp160054_c0_seq1 1112 6 .;CDS_Target=comp160054_c0_seq1 880 782 .;locus=RLOC_00008716
Chr1	stalkie_big_nohaplotig	exon	67429105	67430212	97	+	.	Parent=comp160054_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67429882	67429980	.	+	0	Parent=comp160054_c0_seq1.mrna1
Chr1	gffcl	locus	67435598	67450555	.	+	.	ID=RLOC_00008717;geneIDs=FBgn0052150.1.path1;transcripts=FBgn0052150.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67435598	67450555	.	+	.	ID=FBgn0052150.1.mrna1;geneID=FBgn0052150.1.path1;Name=FBgn0052150.1;Dir=sensecoverage=100.0;identity=99.5;matches=1540;mismatches=8;indels=0;unknowns=0;locus=RLOC_00008717
Chr1	stalkie_big_nohaplotig	exon	67435598	67435611	100	+	.	Parent=FBgn0052150.1.mrna1;Target=FBgn0052150.1 1 14 +
Chr1	stalkie_big_nohaplotig	exon	67442628	67442970	99	+	.	Parent=FBgn0052150.1.mrna1;Target=FBgn0052150.1 15 357 +
Chr1	stalkie_big_nohaplotig	exon	67446120	67446273	99	+	.	Parent=FBgn0052150.1.mrna1;Target=FBgn0052150.1 358 511 +
Chr1	stalkie_big_nohaplotig	exon	67446697	67446824	100	+	.	Parent=FBgn0052150.1.mrna1;Target=FBgn0052150.1 512 639 +
Chr1	stalkie_big_nohaplotig	exon	67449647	67450555	99	+	.	Parent=FBgn0052150.1.mrna1;Target=FBgn0052150.1 640 1548 +
Chr1	stalkie_big_nohaplotig	CDS	67435598	67435611	.	+	0	Parent=FBgn0052150.1.mrna1;Target=FBgn0052150.1 1 14 +
Chr1	stalkie_big_nohaplotig	CDS	67442628	67442970	.	+	1	Parent=FBgn0052150.1.mrna1;Target=FBgn0052150.1 15 357 +
Chr1	stalkie_big_nohaplotig	CDS	67446120	67446273	.	+	0	Parent=FBgn0052150.1.mrna1;Target=FBgn0052150.1 358 511 +
Chr1	stalkie_big_nohaplotig	CDS	67446697	67446824	.	+	2	Parent=FBgn0052150.1.mrna1;Target=FBgn0052150.1 512 639 +
Chr1	stalkie_big_nohaplotig	CDS	67449647	67450555	.	+	0	Parent=FBgn0052150.1.mrna1;Target=FBgn0052150.1 640 1548 +
Chr1	gffcl	locus	67450735	67451292	.	+	.	ID=RLOC_00008718;geneIDs=comp157364_c0_seq1.path1;transcripts=comp157364_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67450735	67451292	.	+	.	ID=comp157364_c0_seq1.mrna1;geneID=comp157364_c0_seq1.path1;Name=comp157364_c0_seq1;Dir=indeterminatecoverage=99.8;identity=91.1;matches=509;mismatches=31;indels=19;unknowns=0;Target=comp157364_c0_seq1 542 2 .;CDS_Target=comp157364_c0_seq1 359 351 .;locus=RLOC_00008718
Chr1	stalkie_big_nohaplotig	exon	67450735	67451292	91	+	.	Parent=comp157364_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67451093	67451101	.	+	0	Parent=comp157364_c0_seq1.mrna1
Chr1	gffcl	locus	67451589	67452775	.	-	.	ID=RLOC_00008719;geneIDs=FBgn0036536.1.path1;transcripts=FBgn0036536.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67451589	67452775	.	-	.	ID=FBgn0036536.1.mrna1;geneID=FBgn0036536.1.path1;Name=FBgn0036536.1;Dir=sensecoverage=100.0;identity=98.8;matches=960;mismatches=10;indels=2;unknowns=0;Target=FBgn0036536.1 2 67 +;locus=RLOC_00008719
Chr1	stalkie_big_nohaplotig	exon	67451589	67451781	97	-	.	Parent=FBgn0036536.1.mrna1;Target=FBgn0036536.1 780 972 +
Chr1	stalkie_big_nohaplotig	exon	67451842	67452053	99	-	.	Parent=FBgn0036536.1.mrna1;Target=FBgn0036536.1 568 779 +
Chr1	stalkie_big_nohaplotig	exon	67452155	67452431	99	-	.	Parent=FBgn0036536.1.mrna1;Target=FBgn0036536.1 291 567 +
Chr1	stalkie_big_nohaplotig	exon	67452488	67452775	98	-	.	Parent=FBgn0036536.1.mrna1;Target=FBgn0036536.1 1 290 +
Chr1	stalkie_big_nohaplotig	CDS	67452711	67452774	.	-	0	Parent=FBgn0036536.1.mrna1
Chr1	gffcl	locus	67455563	67458871	.	-	.	ID=RLOC_00008720;geneIDs=comp151452_c1_seq1.path1;transcripts=comp151452_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67455563	67458871	.	-	.	ID=comp151452_c1_seq1.mrna1;geneID=comp151452_c1_seq1.path1;Name=comp151452_c1_seq1;Dir=antisensecoverage=98.5;identity=99.7;matches=1328;mismatches=2;indels=2;unknowns=0;locus=RLOC_00008720
Chr1	stalkie_big_nohaplotig	exon	67455563	67456213	99	-	.	Parent=comp151452_c1_seq1.mrna1;Target=comp151452_c1_seq1 21 673 -
Chr1	stalkie_big_nohaplotig	exon	67456292	67456452	100	-	.	Parent=comp151452_c1_seq1.mrna1;Target=comp151452_c1_seq1 674 834 -
Chr1	stalkie_big_nohaplotig	exon	67458294	67458428	100	-	.	Parent=comp151452_c1_seq1.mrna1;Target=comp151452_c1_seq1 835 969 -
Chr1	stalkie_big_nohaplotig	exon	67458489	67458871	99	-	.	Parent=comp151452_c1_seq1.mrna1;Target=comp151452_c1_seq1 970 1352 -
Chr1	stalkie_big_nohaplotig	CDS	67456124	67456213	.	-	0	Parent=comp151452_c1_seq1.mrna1;Target=comp151452_c1_seq1 584 673 .
Chr1	stalkie_big_nohaplotig	CDS	67456292	67456435	.	-	0	Parent=comp151452_c1_seq1.mrna1;Target=comp151452_c1_seq1 674 817 .
Chr1	gffcl	locus	67460813	67462462	.	+	.	ID=RLOC_00008721;geneIDs=FBgn0052190.1.path1;transcripts=FBgn0052190.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67460813	67462462	.	+	.	ID=FBgn0052190.1.mrna1;geneID=FBgn0052190.1.path1;Name=FBgn0052190.1;Dir=sensecoverage=99.7;identity=99.2;matches=1451;mismatches=11;indels=0;unknowns=0;locus=RLOC_00008721
Chr1	stalkie_big_nohaplotig	exon	67460813	67461103	98	+	.	Parent=FBgn0052190.1.mrna1;Target=FBgn0052190.1 1 291 +
Chr1	stalkie_big_nohaplotig	exon	67461162	67461660	99	+	.	Parent=FBgn0052190.1.mrna1;Target=FBgn0052190.1 292 790 +
Chr1	stalkie_big_nohaplotig	exon	67461728	67462065	100	+	.	Parent=FBgn0052190.1.mrna1;Target=FBgn0052190.1 791 1128 +
Chr1	stalkie_big_nohaplotig	exon	67462129	67462462	99	+	.	Parent=FBgn0052190.1.mrna1;Target=FBgn0052190.1 1129 1462 +
Chr1	stalkie_big_nohaplotig	CDS	67460813	67461103	.	+	0	Parent=FBgn0052190.1.mrna1;Target=FBgn0052190.1 1 291 +
Chr1	stalkie_big_nohaplotig	CDS	67461162	67461660	.	+	0	Parent=FBgn0052190.1.mrna1;Target=FBgn0052190.1 292 790 +
Chr1	stalkie_big_nohaplotig	CDS	67461728	67462065	.	+	2	Parent=FBgn0052190.1.mrna1;Target=FBgn0052190.1 791 1128 +
Chr1	stalkie_big_nohaplotig	CDS	67462129	67462461	.	+	0	Parent=FBgn0052190.1.mrna1;Target=FBgn0052190.1 1129 1461 +
Chr1	gffcl	locus	67466845	67473241	.	-	.	ID=RLOC_00008722;geneIDs=FBgn0036389.1.path1;transcripts=FBgn0036389.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67466845	67473241	.	-	.	ID=FBgn0036389.1.mrna1;geneID=FBgn0036389.1.path1;Name=FBgn0036389.1;Dir=sensecoverage=100.0;identity=99.8;matches=3437;mismatches=7;indels=0;unknowns=0;locus=RLOC_00008722
Chr1	stalkie_big_nohaplotig	exon	67466845	67467060	100	-	.	Parent=FBgn0036389.1.mrna1;Target=FBgn0036389.1 3229 3444 +
Chr1	stalkie_big_nohaplotig	exon	67468558	67468746	100	-	.	Parent=FBgn0036389.1.mrna1;Target=FBgn0036389.1 3040 3228 +
Chr1	stalkie_big_nohaplotig	exon	67468807	67468881	100	-	.	Parent=FBgn0036389.1.mrna1;Target=FBgn0036389.1 2965 3039 +
Chr1	stalkie_big_nohaplotig	exon	67468941	67471565	99	-	.	Parent=FBgn0036389.1.mrna1;Target=FBgn0036389.1 340 2964 +
Chr1	stalkie_big_nohaplotig	exon	67472071	67472141	100	-	.	Parent=FBgn0036389.1.mrna1;Target=FBgn0036389.1 269 339 +
Chr1	stalkie_big_nohaplotig	exon	67472908	67473017	100	-	.	Parent=FBgn0036389.1.mrna1;Target=FBgn0036389.1 159 268 +
Chr1	stalkie_big_nohaplotig	exon	67473084	67473241	100	-	.	Parent=FBgn0036389.1.mrna1;Target=FBgn0036389.1 1 158 +
Chr1	stalkie_big_nohaplotig	CDS	67466845	67467060	.	-	0	Parent=FBgn0036389.1.mrna1;Target=FBgn0036389.1 3229 3444 +
Chr1	stalkie_big_nohaplotig	CDS	67468558	67468746	.	-	0	Parent=FBgn0036389.1.mrna1;Target=FBgn0036389.1 3040 3228 +
Chr1	stalkie_big_nohaplotig	CDS	67468807	67468881	.	-	0	Parent=FBgn0036389.1.mrna1;Target=FBgn0036389.1 2965 3039 +
Chr1	stalkie_big_nohaplotig	CDS	67468941	67471565	.	-	0	Parent=FBgn0036389.1.mrna1;Target=FBgn0036389.1 340 2964 +
Chr1	stalkie_big_nohaplotig	CDS	67472071	67472141	.	-	2	Parent=FBgn0036389.1.mrna1;Target=FBgn0036389.1 269 339 +
Chr1	stalkie_big_nohaplotig	CDS	67472908	67473017	.	-	1	Parent=FBgn0036389.1.mrna1;Target=FBgn0036389.1 159 268 +
Chr1	stalkie_big_nohaplotig	CDS	67473084	67473241	.	-	0	Parent=FBgn0036389.1.mrna1;Target=FBgn0036389.1 1 158 +
Chr1	gffcl	locus	67475010	67475192	.	-	.	ID=RLOC_00008723;geneIDs=FBgn0040322.1.path2;transcripts=FBgn0040322.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	67475010	67475192	.	-	.	ID=FBgn0040322.1.mrna2;geneID=FBgn0040322.1.path2;Name=FBgn0040322.1;Dir=indeterminatecoverage=17.8;identity=100.0;matches=183;mismatches=0;indels=0;unknowns=0;Target=FBgn0040322.1 1029 847 .;locus=RLOC_00008723
Chr1	stalkie_big_nohaplotig	exon	67475010	67475192	100	-	.	Parent=FBgn0040322.1.mrna2
Chr1	gffcl	locus	67502097	67502962	.	-	.	ID=RLOC_00008724;geneIDs=comp152963_c0_seq1.path1;transcripts=comp152963_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67502097	67502962	.	-	.	ID=comp152963_c0_seq1.mrna1;geneID=comp152963_c0_seq1.path1;Name=comp152963_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=862;mismatches=4;indels=0;unknowns=0;Target=comp152963_c0_seq1 866 1 .;CDS_Target=comp152963_c0_seq1 379 356 .;locus=RLOC_00008724
Chr1	stalkie_big_nohaplotig	exon	67502097	67502962	99	-	.	Parent=comp152963_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67502584	67502607	.	-	0	Parent=comp152963_c0_seq1.mrna1
Chr1	gffcl	locus	67505114	67569869	.	+	.	ID=RLOC_00008725;geneIDs=comp154371_c0_seq1.path1;transcripts=comp154371_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67505114	67569869	.	+	.	ID=comp154371_c0_seq1.mrna1;geneID=comp154371_c0_seq1.path1;Name=comp154371_c0_seq1;Dir=indeterminatecoverage=50.0;identity=94.2;matches=212;mismatches=9;indels=4;unknowns=0;locus=RLOC_00008725
Chr1	stalkie_big_nohaplotig	exon	67505114	67505269	98	+	.	Parent=comp154371_c0_seq1.mrna1;Target=comp154371_c0_seq1 158 3 .
Chr1	stalkie_big_nohaplotig	exon	67512914	67512922	77	+	.	Parent=comp154371_c0_seq1.mrna1;Target=comp154371_c0_seq1 167 159 .
Chr1	stalkie_big_nohaplotig	exon	67535322	67535329	100	+	.	Parent=comp154371_c0_seq1.mrna1;Target=comp154371_c0_seq1 175 168 .
Chr1	stalkie_big_nohaplotig	exon	67539671	67539672	100	+	.	Parent=comp154371_c0_seq1.mrna1;Target=comp154371_c0_seq1 177 176 .
Chr1	stalkie_big_nohaplotig	exon	67545662	67545669	75	+	.	Parent=comp154371_c0_seq1.mrna1;Target=comp154371_c0_seq1 185 178 .
Chr1	stalkie_big_nohaplotig	exon	67554977	67554996	70	+	.	Parent=comp154371_c0_seq1.mrna1;Target=comp154371_c0_seq1 201 186 .
Chr1	stalkie_big_nohaplotig	exon	67562137	67562141	100	+	.	Parent=comp154371_c0_seq1.mrna1;Target=comp154371_c0_seq1 206 202 .
Chr1	stalkie_big_nohaplotig	exon	67567979	67567987	100	+	.	Parent=comp154371_c0_seq1.mrna1;Target=comp154371_c0_seq1 215 207 .
Chr1	stalkie_big_nohaplotig	exon	67569862	67569869	87	+	.	Parent=comp154371_c0_seq1.mrna1;Target=comp154371_c0_seq1 223 216 .
Chr1	stalkie_big_nohaplotig	CDS	67539671	67539672	.	+	1	Parent=comp154371_c0_seq1.mrna1;Target=comp154371_c0_seq1 177 176 .
Chr1	stalkie_big_nohaplotig	CDS	67545662	67545669	.	+	2	Parent=comp154371_c0_seq1.mrna1;Target=comp154371_c0_seq1 185 178 .
Chr1	stalkie_big_nohaplotig	CDS	67554977	67554996	.	+	0	Parent=comp154371_c0_seq1.mrna1;Target=comp154371_c0_seq1 201 186 .
Chr1	gffcl	locus	67505815	67506306	.	+	.	ID=RLOC_00008726;geneIDs=comp149981_c0_seq1.path1;transcripts=comp149981_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67505815	67506306	.	+	.	ID=comp149981_c0_seq1.mrna1;geneID=comp149981_c0_seq1.path1;Name=comp149981_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.4;matches=474;mismatches=8;indels=15;unknowns=0;Target=comp149981_c0_seq1 487 1 .;CDS_Target=comp149981_c0_seq1 60 1 .;locus=RLOC_00008726
Chr1	stalkie_big_nohaplotig	exon	67505815	67506306	95	+	.	Parent=comp149981_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67505815	67505874	.	+	0	Parent=comp149981_c0_seq1.mrna1
Chr1	gffcl	locus	67508204	67526255	.	-	.	ID=RLOC_00008727;geneIDs=FBgn0036544.1.path1;transcripts=FBgn0036544.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67508204	67526255	.	-	.	ID=FBgn0036544.1.mrna1;geneID=FBgn0036544.1.path1;Name=FBgn0036544.1;Dir=sensecoverage=100.0;identity=99.9;matches=2587;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008727
Chr1	stalkie_big_nohaplotig	exon	67508204	67508285	100	-	.	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 2508 2589 +
Chr1	stalkie_big_nohaplotig	exon	67511734	67511864	100	-	.	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 2377 2507 +
Chr1	stalkie_big_nohaplotig	exon	67511926	67512095	100	-	.	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 2207 2376 +
Chr1	stalkie_big_nohaplotig	exon	67512168	67512243	100	-	.	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 2131 2206 +
Chr1	stalkie_big_nohaplotig	exon	67512311	67512415	100	-	.	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 2026 2130 +
Chr1	stalkie_big_nohaplotig	exon	67512487	67512653	100	-	.	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 1859 2025 +
Chr1	stalkie_big_nohaplotig	exon	67512720	67512878	100	-	.	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 1700 1858 +
Chr1	stalkie_big_nohaplotig	exon	67512940	67513400	99	-	.	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 1239 1699 +
Chr1	stalkie_big_nohaplotig	exon	67513665	67513889	100	-	.	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 1014 1238 +
Chr1	stalkie_big_nohaplotig	exon	67514933	67515132	100	-	.	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 814 1013 +
Chr1	stalkie_big_nohaplotig	exon	67515375	67515590	100	-	.	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 598 813 +
Chr1	stalkie_big_nohaplotig	exon	67518283	67518433	99	-	.	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 447 597 +
Chr1	stalkie_big_nohaplotig	exon	67518524	67518750	100	-	.	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 220 446 +
Chr1	stalkie_big_nohaplotig	exon	67525798	67525892	100	-	.	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 125 219 +
Chr1	stalkie_big_nohaplotig	exon	67526132	67526255	100	-	.	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 1 124 +
Chr1	stalkie_big_nohaplotig	CDS	67508204	67508285	.	-	1	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 2508 2589 +
Chr1	stalkie_big_nohaplotig	CDS	67511734	67511864	.	-	0	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 2377 2507 +
Chr1	stalkie_big_nohaplotig	CDS	67511926	67512095	.	-	2	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 2207 2376 +
Chr1	stalkie_big_nohaplotig	CDS	67512168	67512243	.	-	0	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 2131 2206 +
Chr1	stalkie_big_nohaplotig	CDS	67512311	67512415	.	-	0	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 2026 2130 +
Chr1	stalkie_big_nohaplotig	CDS	67512487	67512653	.	-	2	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 1859 2025 +
Chr1	stalkie_big_nohaplotig	CDS	67512720	67512878	.	-	2	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 1700 1858 +
Chr1	stalkie_big_nohaplotig	CDS	67512940	67513400	.	-	1	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 1239 1699 +
Chr1	stalkie_big_nohaplotig	CDS	67513665	67513889	.	-	1	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 1014 1238 +
Chr1	stalkie_big_nohaplotig	CDS	67514933	67515132	.	-	0	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 814 1013 +
Chr1	stalkie_big_nohaplotig	CDS	67515375	67515590	.	-	0	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 598 813 +
Chr1	stalkie_big_nohaplotig	CDS	67518283	67518433	.	-	1	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 447 597 +
Chr1	stalkie_big_nohaplotig	CDS	67518524	67518750	.	-	0	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 220 446 +
Chr1	stalkie_big_nohaplotig	CDS	67525798	67525892	.	-	2	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 125 219 +
Chr1	stalkie_big_nohaplotig	CDS	67526132	67526255	.	-	0	Parent=FBgn0036544.1.mrna1;Target=FBgn0036544.1 1 124 +
Chr1	gffcl	locus	67557452	67732579	.	-	.	ID=RLOC_00008728;geneIDs=FBgn0000489.1.path1,comp146157_c0_seq1.path1;transcripts=FBgn0000489.1.mrna1,comp146157_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67557452	67582485	.	-	.	ID=FBgn0000489.1.mrna1;geneID=FBgn0000489.1.path1;Name=FBgn0000489.1;Dir=sensecoverage=100.0;identity=99.8;matches=1341;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008728
Chr1	stalkie_big_nohaplotig	exon	67557452	67557574	100	-	.	Parent=FBgn0000489.1.mrna1;Target=FBgn0000489.1 1222 1344 +
Chr1	stalkie_big_nohaplotig	exon	67559447	67559524	100	-	.	Parent=FBgn0000489.1.mrna1;Target=FBgn0000489.1 1144 1221 +
Chr1	stalkie_big_nohaplotig	exon	67562287	67562468	100	-	.	Parent=FBgn0000489.1.mrna1;Target=FBgn0000489.1 962 1143 +
Chr1	stalkie_big_nohaplotig	exon	67562595	67562840	100	-	.	Parent=FBgn0000489.1.mrna1;Target=FBgn0000489.1 716 961 +
Chr1	stalkie_big_nohaplotig	exon	67562927	67563036	99	-	.	Parent=FBgn0000489.1.mrna1;Target=FBgn0000489.1 606 715 +
Chr1	stalkie_big_nohaplotig	exon	67565669	67565837	100	-	.	Parent=FBgn0000489.1.mrna1;Target=FBgn0000489.1 437 605 +
Chr1	stalkie_big_nohaplotig	exon	67579830	67579971	100	-	.	Parent=FBgn0000489.1.mrna1;Target=FBgn0000489.1 295 436 +
Chr1	stalkie_big_nohaplotig	exon	67582192	67582485	99	-	.	Parent=FBgn0000489.1.mrna1;Target=FBgn0000489.1 1 294 +
Chr1	stalkie_big_nohaplotig	CDS	67557452	67557574	.	-	0	Parent=FBgn0000489.1.mrna1;Target=FBgn0000489.1 1222 1344 +
Chr1	stalkie_big_nohaplotig	CDS	67559447	67559524	.	-	0	Parent=FBgn0000489.1.mrna1;Target=FBgn0000489.1 1144 1221 +
Chr1	stalkie_big_nohaplotig	CDS	67562287	67562468	.	-	2	Parent=FBgn0000489.1.mrna1;Target=FBgn0000489.1 962 1143 +
Chr1	stalkie_big_nohaplotig	CDS	67562595	67562840	.	-	2	Parent=FBgn0000489.1.mrna1;Target=FBgn0000489.1 716 961 +
Chr1	stalkie_big_nohaplotig	CDS	67562927	67563036	.	-	1	Parent=FBgn0000489.1.mrna1;Target=FBgn0000489.1 606 715 +
Chr1	stalkie_big_nohaplotig	CDS	67565669	67565837	.	-	2	Parent=FBgn0000489.1.mrna1;Target=FBgn0000489.1 437 605 +
Chr1	stalkie_big_nohaplotig	CDS	67579830	67579971	.	-	0	Parent=FBgn0000489.1.mrna1;Target=FBgn0000489.1 295 436 +
Chr1	stalkie_big_nohaplotig	CDS	67582192	67582485	.	-	0	Parent=FBgn0000489.1.mrna1;Target=FBgn0000489.1 1 294 +
Chr1	stalkie_big_nohaplotig	mRNA	67557553	67732579	.	-	.	ID=comp146157_c0_seq1.mrna1;geneID=comp146157_c0_seq1.path1;Name=comp146157_c0_seq1;Dir=indeterminatecoverage=76.7;identity=95.1;matches=620;mismatches=16;indels=16;unknowns=0;Target=comp146157_c0_seq1 588 517 .;locus=RLOC_00008728
Chr1	stalkie_big_nohaplotig	exon	67557553	67557987	99	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 902 468 .
Chr1	stalkie_big_nohaplotig	exon	67627502	67627503	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 467 466 .
Chr1	stalkie_big_nohaplotig	exon	67630332	67630335	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 465 462 .
Chr1	stalkie_big_nohaplotig	exon	67633241	67633242	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 461 460 .
Chr1	stalkie_big_nohaplotig	exon	67634890	67634895	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 459 454 .
Chr1	stalkie_big_nohaplotig	exon	67636640	67636643	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 453 450 .
Chr1	stalkie_big_nohaplotig	exon	67639320	67639323	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 449 446 .
Chr1	stalkie_big_nohaplotig	exon	67640204	67640211	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 445 438 .
Chr1	stalkie_big_nohaplotig	exon	67641173	67641175	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 437 435 .
Chr1	stalkie_big_nohaplotig	exon	67643029	67643030	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 434 433 .
Chr1	stalkie_big_nohaplotig	exon	67643397	67643403	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 432 426 .
Chr1	stalkie_big_nohaplotig	exon	67645112	67645116	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 425 421 .
Chr1	stalkie_big_nohaplotig	exon	67653794	67653802	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 420 412 .
Chr1	stalkie_big_nohaplotig	exon	67658944	67658945	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 411 410 .
Chr1	stalkie_big_nohaplotig	exon	67659036	67659039	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 409 406 .
Chr1	stalkie_big_nohaplotig	exon	67664641	67664685	47	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 405 371 .
Chr1	stalkie_big_nohaplotig	exon	67674338	67674349	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 370 359 .
Chr1	stalkie_big_nohaplotig	exon	67680889	67680890	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 358 357 .
Chr1	stalkie_big_nohaplotig	exon	67684890	67684894	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 356 352 .
Chr1	stalkie_big_nohaplotig	exon	67684898	67684903	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 296 291 .
Chr1	stalkie_big_nohaplotig	exon	67688920	67688921	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 290 289 .
Chr1	stalkie_big_nohaplotig	exon	67694102	67694108	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 288 282 .
Chr1	stalkie_big_nohaplotig	exon	67695857	67695858	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 281 280 .
Chr1	stalkie_big_nohaplotig	exon	67701499	67701500	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 279 278 .
Chr1	stalkie_big_nohaplotig	exon	67709642	67709648	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 277 271 .
Chr1	stalkie_big_nohaplotig	exon	67709841	67709842	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 270 269 .
Chr1	stalkie_big_nohaplotig	exon	67711458	67711465	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 268 261 .
Chr1	stalkie_big_nohaplotig	exon	67711574	67711576	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 260 258 .
Chr1	stalkie_big_nohaplotig	exon	67713889	67713895	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 257 251 .
Chr1	stalkie_big_nohaplotig	exon	67714661	67714669	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 250 242 .
Chr1	stalkie_big_nohaplotig	exon	67721282	67721303	72	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 241 224 .
Chr1	stalkie_big_nohaplotig	exon	67725157	67725158	100	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 223 222 .
Chr1	stalkie_big_nohaplotig	exon	67732569	67732579	90	-	.	Parent=comp146157_c0_seq1.mrna1;Target=comp146157_c0_seq1 221 211 .
Chr1	stalkie_big_nohaplotig	CDS	67557867	67557938	.	-	0	Parent=comp146157_c0_seq1.mrna1
Chr1	gffcl	locus	67558648	67558940	.	+	.	ID=RLOC_00008729;geneIDs=comp146270_c1_seq1.path1;transcripts=comp146270_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67558648	67558940	.	+	.	ID=comp146270_c1_seq1.mrna1;geneID=comp146270_c1_seq1.path1;Name=comp146270_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=291;mismatches=2;indels=0;unknowns=0;Target=comp146270_c1_seq1 293 1 .;CDS_Target=comp146270_c1_seq1 54 1 .;locus=RLOC_00008729
Chr1	stalkie_big_nohaplotig	exon	67558648	67558940	99	+	.	Parent=comp146270_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67558648	67558701	.	+	0	Parent=comp146270_c1_seq1.mrna1
Chr1	gffcl	locus	67573283	67574776	.	-	.	ID=RLOC_00008730;geneIDs=comp146149_c0_seq1.path1;transcripts=comp146149_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67573283	67574776	.	-	.	ID=comp146149_c0_seq1.mrna1;geneID=comp146149_c0_seq1.path1;Name=comp146149_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.2;matches=1490;mismatches=4;indels=8;unknowns=0;Target=comp146149_c0_seq1 1502 1 .;CDS_Target=comp146149_c0_seq1 878 870 .;locus=RLOC_00008730
Chr1	stalkie_big_nohaplotig	exon	67573283	67574776	99	-	.	Parent=comp146149_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67573900	67573907	.	-	0	Parent=comp146149_c0_seq1.mrna1
Chr1	gffcl	locus	67609583	67610959	.	-	.	ID=RLOC_00008731;geneIDs=Dv_FBgn0203753.1.path1;transcripts=Dv_FBgn0203753.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67609583	67610959	.	-	.	ID=Dv_FBgn0203753.1.mrna1;geneID=Dv_FBgn0203753.1.path1;Name=Dv_FBgn0203753.1;Dir=sensecoverage=100.0;identity=99.5;matches=1060;mismatches=5;indels=0;unknowns=0;locus=RLOC_00008731
Chr1	stalkie_big_nohaplotig	exon	67609583	67609621	100	-	.	Parent=Dv_FBgn0203753.1.mrna1;Target=Dv_FBgn0203753.1 1027 1065 +
Chr1	stalkie_big_nohaplotig	exon	67609688	67610069	98	-	.	Parent=Dv_FBgn0203753.1.mrna1;Target=Dv_FBgn0203753.1 645 1026 +
Chr1	stalkie_big_nohaplotig	exon	67610143	67610219	100	-	.	Parent=Dv_FBgn0203753.1.mrna1;Target=Dv_FBgn0203753.1 568 644 +
Chr1	stalkie_big_nohaplotig	exon	67610290	67610644	100	-	.	Parent=Dv_FBgn0203753.1.mrna1;Target=Dv_FBgn0203753.1 213 567 +
Chr1	stalkie_big_nohaplotig	exon	67610748	67610959	100	-	.	Parent=Dv_FBgn0203753.1.mrna1;Target=Dv_FBgn0203753.1 1 212 +
Chr1	stalkie_big_nohaplotig	CDS	67609583	67609621	.	-	0	Parent=Dv_FBgn0203753.1.mrna1;Target=Dv_FBgn0203753.1 1027 1065 +
Chr1	stalkie_big_nohaplotig	CDS	67609688	67610069	.	-	1	Parent=Dv_FBgn0203753.1.mrna1;Target=Dv_FBgn0203753.1 645 1026 +
Chr1	stalkie_big_nohaplotig	CDS	67610143	67610219	.	-	0	Parent=Dv_FBgn0203753.1.mrna1;Target=Dv_FBgn0203753.1 568 644 +
Chr1	stalkie_big_nohaplotig	CDS	67610290	67610644	.	-	1	Parent=Dv_FBgn0203753.1.mrna1;Target=Dv_FBgn0203753.1 213 567 +
Chr1	stalkie_big_nohaplotig	CDS	67610748	67610959	.	-	0	Parent=Dv_FBgn0203753.1.mrna1;Target=Dv_FBgn0203753.1 1 212 +
Chr1	gffcl	locus	67619778	67621125	.	+	.	ID=RLOC_00008732;geneIDs=FBgn0036545.1.path1,comp151558_c0_seq1.path1;transcripts=FBgn0036545.1.mrna1,comp151558_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67619778	67621125	.	+	.	ID=FBgn0036545.1.mrna1;geneID=FBgn0036545.1.path1;Name=FBgn0036545.1;Dir=sensecoverage=100.0;identity=99.6;matches=714;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008732
Chr1	stalkie_big_nohaplotig	exon	67619778	67620045	99	+	.	Parent=FBgn0036545.1.mrna1;Target=FBgn0036545.1 1 268 +
Chr1	stalkie_big_nohaplotig	exon	67620677	67621125	99	+	.	Parent=FBgn0036545.1.mrna1;Target=FBgn0036545.1 269 717 +
Chr1	stalkie_big_nohaplotig	CDS	67619799	67620045	.	+	0	Parent=FBgn0036545.1.mrna1;Target=FBgn0036545.1 22 268 +
Chr1	stalkie_big_nohaplotig	CDS	67620677	67621125	.	+	2	Parent=FBgn0036545.1.mrna1;Target=FBgn0036545.1 269 717 +
Chr1	stalkie_big_nohaplotig	mRNA	67620022	67620707	.	+	.	ID=comp151558_c0_seq1.mrna1;geneID=comp151558_c0_seq1.path1;Name=comp151558_c0_seq1;Dir=sensecoverage=99.7;identity=97.1;matches=577;mismatches=15;indels=2;unknowns=0;Target=comp151558_c0_seq1 3 131 +;locus=RLOC_00008732
Chr1	stalkie_big_nohaplotig	exon	67620022	67620582	97	+	.	Parent=comp151558_c0_seq1.mrna1;Target=comp151558_c0_seq1 1 559 +
Chr1	stalkie_big_nohaplotig	exon	67620675	67620707	90	+	.	Parent=comp151558_c0_seq1.mrna1;Target=comp151558_c0_seq1 560 592 +
Chr1	stalkie_big_nohaplotig	CDS	67620024	67620152	.	+	0	Parent=comp151558_c0_seq1.mrna1
Chr1	gffcl	locus	67624419	67625987	.	+	.	ID=RLOC_00008733;geneIDs=comp155107_c0_seq1.path1;transcripts=comp155107_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67624419	67625987	.	+	.	ID=comp155107_c0_seq1.mrna1;geneID=comp155107_c0_seq1.path1;Name=comp155107_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.2;matches=1556;mismatches=11;indels=2;unknowns=0;Target=comp155107_c0_seq1 1571 5 .;CDS_Target=comp155107_c0_seq1 567 463 .;locus=RLOC_00008733
Chr1	stalkie_big_nohaplotig	exon	67624419	67625987	99	+	.	Parent=comp155107_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67624878	67624982	.	+	0	Parent=comp155107_c0_seq1.mrna1
Chr1	gffcl	locus	67626322	67627005	.	.	.	ID=RLOC_00008734;geneIDs=comp129758_c0_seq1.path1,comp142566_c0_seq1.path1,comp143812_c0_seq1.path1;transcripts=comp142566_c0_seq1.mrna1,comp143812_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67626322	67626640	.	+	.	ID=comp142566_c0_seq1.mrna1;geneID=comp142566_c0_seq1.path1;Name=comp142566_c0_seq1;Dir=indeterminatecoverage=65.6;identity=99.1;matches=316;mismatches=3;indels=0;unknowns=0;Target=comp142566_c0_seq1 469 151 .;CDS_Target=comp142566_c0_seq1 221 153 .;locus=RLOC_00008734
Chr1	stalkie_big_nohaplotig	exon	67626322	67626640	99	+	.	Parent=comp142566_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67626324	67626392	.	+	0	Parent=comp142566_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67626810	67627005	.	+	.	ID=comp143812_c0_seq1.mrna1;geneID=comp143812_c0_seq1.path1;Name=comp143812_c0_seq1;Dir=indeterminatecoverage=87.3;identity=94.0;matches=189;mismatches=6;indels=6;unknowns=0;Target=comp143812_c0_seq1 200 1 .;CDS_Target=comp143812_c0_seq1 60 1 .;locus=RLOC_00008734
Chr1	stalkie_big_nohaplotig	exon	67626810	67627005	94	+	.	Parent=comp143812_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67626810	67626869	.	+	0	Parent=comp143812_c0_seq1.mrna1
Chr1	gffcl	locus	67627804	67628125	.	+	.	ID=RLOC_00008735;geneIDs=comp149264_c0_seq1.path1;transcripts=comp149264_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67627804	67628125	.	+	.	ID=comp149264_c0_seq1.mrna1;geneID=comp149264_c0_seq1.path1;Name=comp149264_c0_seq1;Dir=indeterminatecoverage=58.9;identity=97.5;matches=314;mismatches=4;indels=4;unknowns=0;Target=comp149264_c0_seq1 327 10 .;CDS_Target=comp149264_c0_seq1 139 11 .;locus=RLOC_00008735
Chr1	stalkie_big_nohaplotig	exon	67627804	67628125	97	+	.	Parent=comp149264_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67627805	67627933	.	+	0	Parent=comp149264_c0_seq1.mrna1
Chr1	gffcl	locus	67628394	67629083	.	-	.	ID=RLOC_00008736;geneIDs=comp143859_c0_seq1.path1;transcripts=comp143859_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67628394	67629083	.	-	.	ID=comp143859_c0_seq1.mrna1;geneID=comp143859_c0_seq1.path1;Name=comp143859_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.4;matches=686;mismatches=4;indels=0;unknowns=0;Target=comp143859_c0_seq1 696 7 .;CDS_Target=comp143859_c0_seq1 620 540 .;locus=RLOC_00008736
Chr1	stalkie_big_nohaplotig	exon	67628394	67629083	99	-	.	Parent=comp143859_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67628470	67628550	.	-	0	Parent=comp143859_c0_seq1.mrna1
Chr1	gffcl	locus	67630560	67707131	.	.	.	ID=RLOC_00008737;geneIDs=comp151502_c0_seq1.path1,comp154810_c0_seq1.path1;transcripts=comp154810_c0_seq1.mrna1,comp151502_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67630560	67707131	.	-	.	ID=comp154810_c0_seq1.mrna1;geneID=comp154810_c0_seq1.path1;Name=comp154810_c0_seq1;Dir=indeterminatecoverage=90.2;identity=98.3;matches=807;mismatches=12;indels=2;unknowns=0;Target=comp154810_c0_seq1 530 423 .;locus=RLOC_00008737
Chr1	stalkie_big_nohaplotig	exon	67630560	67631314	99	-	.	Parent=comp154810_c0_seq1.mrna1;Target=comp154810_c0_seq1 958 204 .
Chr1	stalkie_big_nohaplotig	exon	67648787	67648790	100	-	.	Parent=comp154810_c0_seq1.mrna1;Target=comp154810_c0_seq1 203 200 .
Chr1	stalkie_big_nohaplotig	exon	67664753	67664754	100	-	.	Parent=comp154810_c0_seq1.mrna1;Target=comp154810_c0_seq1 199 198 .
Chr1	stalkie_big_nohaplotig	exon	67686544	67686551	87	-	.	Parent=comp154810_c0_seq1.mrna1;Target=comp154810_c0_seq1 197 190 .
Chr1	stalkie_big_nohaplotig	exon	67688843	67688851	100	-	.	Parent=comp154810_c0_seq1.mrna1;Target=comp154810_c0_seq1 189 181 .
Chr1	stalkie_big_nohaplotig	exon	67688868	67688900	63	-	.	Parent=comp154810_c0_seq1.mrna1;Target=comp154810_c0_seq1 135 105 .
Chr1	stalkie_big_nohaplotig	exon	67692797	67692799	100	-	.	Parent=comp154810_c0_seq1.mrna1;Target=comp154810_c0_seq1 104 102 .
Chr1	stalkie_big_nohaplotig	exon	67700212	67700213	100	-	.	Parent=comp154810_c0_seq1.mrna1;Target=comp154810_c0_seq1 101 100 .
Chr1	stalkie_big_nohaplotig	exon	67707127	67707131	100	-	.	Parent=comp154810_c0_seq1.mrna1;Target=comp154810_c0_seq1 99 95 .
Chr1	stalkie_big_nohaplotig	CDS	67630988	67631095	.	-	0	Parent=comp154810_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67648164	67649015	.	+	.	ID=comp151502_c0_seq1.mrna1;geneID=comp151502_c0_seq1.path1;Name=comp151502_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=849;mismatches=3;indels=0;unknowns=0;Target=comp151502_c0_seq1 852 1 .;CDS_Target=comp151502_c0_seq1 182 105 .;locus=RLOC_00008737
Chr1	stalkie_big_nohaplotig	exon	67648164	67649015	99	+	.	Parent=comp151502_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67648268	67648345	.	+	0	Parent=comp151502_c0_seq1.mrna1
Chr1	gffcl	locus	67635025	67636397	.	-	.	ID=RLOC_00008738;geneIDs=comp157836_c0_seq1.path1;transcripts=comp157836_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67635025	67636397	.	-	.	ID=comp157836_c0_seq1.mrna1;geneID=comp157836_c0_seq1.path1;Name=comp157836_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1367;mismatches=6;indels=0;unknowns=0;Target=comp157836_c0_seq1 1373 1 .;CDS_Target=comp157836_c0_seq1 579 475 .;locus=RLOC_00008738
Chr1	stalkie_big_nohaplotig	exon	67635025	67636397	99	-	.	Parent=comp157836_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67635819	67635923	.	-	0	Parent=comp157836_c0_seq1.mrna1
Chr1	gffcl	locus	67637251	67667986	.	-	.	ID=RLOC_00008739;geneIDs=FBgn0262737.1.path1,comp141149_c0_seq1.path1,comp587199_c0_seq1.path1;transcripts=FBgn0262737.1.mrna1,comp587199_c0_seq1.mrna1,comp141149_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67637251	67667986	.	-	.	ID=FBgn0262737.1.mrna1;geneID=FBgn0262737.1.path1;Name=FBgn0262737.1;Dir=sensecoverage=100.0;identity=100.0;matches=1218;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008739
Chr1	stalkie_big_nohaplotig	exon	67637251	67637332	100	-	.	Parent=FBgn0262737.1.mrna1;Target=FBgn0262737.1 1137 1218 +
Chr1	stalkie_big_nohaplotig	exon	67645597	67645867	100	-	.	Parent=FBgn0262737.1.mrna1;Target=FBgn0262737.1 866 1136 +
Chr1	stalkie_big_nohaplotig	exon	67647317	67647401	100	-	.	Parent=FBgn0262737.1.mrna1;Target=FBgn0262737.1 781 865 +
Chr1	stalkie_big_nohaplotig	exon	67649584	67649721	100	-	.	Parent=FBgn0262737.1.mrna1;Target=FBgn0262737.1 643 780 +
Chr1	stalkie_big_nohaplotig	exon	67652327	67652446	100	-	.	Parent=FBgn0262737.1.mrna1;Target=FBgn0262737.1 523 642 +
Chr1	stalkie_big_nohaplotig	exon	67652540	67652703	100	-	.	Parent=FBgn0262737.1.mrna1;Target=FBgn0262737.1 359 522 +
Chr1	stalkie_big_nohaplotig	exon	67652779	67652872	100	-	.	Parent=FBgn0262737.1.mrna1;Target=FBgn0262737.1 265 358 +
Chr1	stalkie_big_nohaplotig	exon	67652934	67653050	100	-	.	Parent=FBgn0262737.1.mrna1;Target=FBgn0262737.1 148 264 +
Chr1	stalkie_big_nohaplotig	exon	67653123	67653179	100	-	.	Parent=FBgn0262737.1.mrna1;Target=FBgn0262737.1 91 147 +
Chr1	stalkie_big_nohaplotig	exon	67667897	67667986	100	-	.	Parent=FBgn0262737.1.mrna1;Target=FBgn0262737.1 1 90 +
Chr1	stalkie_big_nohaplotig	CDS	67637251	67637332	.	-	1	Parent=FBgn0262737.1.mrna1;Target=FBgn0262737.1 1137 1218 +
Chr1	stalkie_big_nohaplotig	CDS	67645597	67645867	.	-	2	Parent=FBgn0262737.1.mrna1;Target=FBgn0262737.1 866 1136 +
Chr1	stalkie_big_nohaplotig	CDS	67647317	67647401	.	-	0	Parent=FBgn0262737.1.mrna1;Target=FBgn0262737.1 781 865 +
Chr1	stalkie_big_nohaplotig	CDS	67649584	67649721	.	-	0	Parent=FBgn0262737.1.mrna1;Target=FBgn0262737.1 643 780 +
Chr1	stalkie_big_nohaplotig	CDS	67652327	67652446	.	-	0	Parent=FBgn0262737.1.mrna1;Target=FBgn0262737.1 523 642 +
Chr1	stalkie_big_nohaplotig	CDS	67652540	67652703	.	-	2	Parent=FBgn0262737.1.mrna1;Target=FBgn0262737.1 359 522 +
Chr1	stalkie_big_nohaplotig	CDS	67652779	67652872	.	-	0	Parent=FBgn0262737.1.mrna1;Target=FBgn0262737.1 265 358 +
Chr1	stalkie_big_nohaplotig	CDS	67652934	67653050	.	-	0	Parent=FBgn0262737.1.mrna1;Target=FBgn0262737.1 148 264 +
Chr1	stalkie_big_nohaplotig	CDS	67653123	67653179	.	-	0	Parent=FBgn0262737.1.mrna1;Target=FBgn0262737.1 91 147 +
Chr1	stalkie_big_nohaplotig	CDS	67667897	67667986	.	-	0	Parent=FBgn0262737.1.mrna1;Target=FBgn0262737.1 1 90 +
Chr1	stalkie_big_nohaplotig	mRNA	67649037	67649604	.	-	.	ID=comp587199_c0_seq1.mrna1;geneID=comp587199_c0_seq1.path1;Name=comp587199_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=568;mismatches=0;indels=0;unknowns=0;Target=comp587199_c0_seq1 568 1 .;CDS_Target=comp587199_c0_seq1 499 437 .;locus=RLOC_00008739
Chr1	stalkie_big_nohaplotig	exon	67649037	67649604	100	-	.	Parent=comp587199_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67649106	67649168	.	-	0	Parent=comp587199_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67650408	67652350	.	-	.	ID=comp141149_c0_seq1.mrna1;geneID=comp141149_c0_seq1.path1;Name=comp141149_c0_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=1294;mismatches=1;indels=8;unknowns=0;locus=RLOC_00008739
Chr1	stalkie_big_nohaplotig	exon	67650408	67651686	99	-	.	Parent=comp141149_c0_seq1.mrna1;Target=comp141149_c0_seq1 1 1271 -
Chr1	stalkie_big_nohaplotig	exon	67652327	67652350	100	-	.	Parent=comp141149_c0_seq1.mrna1;Target=comp141149_c0_seq1 1272 1295 -
Chr1	stalkie_big_nohaplotig	CDS	67651633	67651686	.	-	0	Parent=comp141149_c0_seq1.mrna1;Target=comp141149_c0_seq1 1218 1271 .
Chr1	stalkie_big_nohaplotig	CDS	67652327	67652350	.	-	0	Parent=comp141149_c0_seq1.mrna1;Target=comp141149_c0_seq1 1272 1295 .
Chr1	gffcl	locus	67679028	67679536	.	-	.	ID=RLOC_00008740;geneIDs=comp141242_c0_seq1.path1;transcripts=comp141242_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67679028	67679536	.	-	.	ID=comp141242_c0_seq1.mrna1;geneID=comp141242_c0_seq1.path1;Name=comp141242_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=508;mismatches=1;indels=0;unknowns=0;Target=comp141242_c0_seq1 509 1 .;CDS_Target=comp141242_c0_seq1 152 51 .;locus=RLOC_00008740
Chr1	stalkie_big_nohaplotig	exon	67679028	67679536	99	-	.	Parent=comp141242_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67679385	67679486	.	-	0	Parent=comp141242_c0_seq1.mrna1
Chr1	gffcl	locus	67760054	67760417	.	-	.	ID=RLOC_00008741;geneIDs=comp149368_c0_seq1.path1;transcripts=comp149368_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67760054	67760417	.	-	.	ID=comp149368_c0_seq1.mrna1;geneID=comp149368_c0_seq1.path1;Name=comp149368_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.4;matches=358;mismatches=6;indels=0;unknowns=0;Target=comp149368_c0_seq1 365 2 .;CDS_Target=comp149368_c0_seq1 63 4 .;locus=RLOC_00008741
Chr1	stalkie_big_nohaplotig	exon	67760054	67760417	98	-	.	Parent=comp149368_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67760356	67760415	.	-	0	Parent=comp149368_c0_seq1.mrna1
Chr1	gffcl	locus	67770590	67771804	.	+	.	ID=RLOC_00008742;geneIDs=comp160727_c0_seq1.path1;transcripts=comp160727_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67770590	67771804	.	+	.	ID=comp160727_c0_seq1.mrna1;geneID=comp160727_c0_seq1.path1;Name=comp160727_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=936;mismatches=5;indels=0;unknowns=0;Target=comp160727_c0_seq1 430 149 .;locus=RLOC_00008742
Chr1	stalkie_big_nohaplotig	exon	67770590	67771445	99	+	.	Parent=comp160727_c0_seq1.mrna1;Target=comp160727_c0_seq1 856 1 .
Chr1	stalkie_big_nohaplotig	exon	67771720	67771804	100	+	.	Parent=comp160727_c0_seq1.mrna1;Target=comp160727_c0_seq1 954 870 .
Chr1	stalkie_big_nohaplotig	CDS	67770738	67771019	.	+	0	Parent=comp160727_c0_seq1.mrna1
Chr1	gffcl	locus	67775044	67786454	.	+	.	ID=RLOC_00008743;geneIDs=FBgn0037140.1.path1;transcripts=FBgn0037140.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67775044	67786454	.	+	.	ID=FBgn0037140.1.mrna1;geneID=FBgn0037140.1.path1;Name=FBgn0037140.1;Dir=sensecoverage=100.0;identity=100.0;matches=1668;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008743
Chr1	stalkie_big_nohaplotig	exon	67775044	67775246	100	+	.	Parent=FBgn0037140.1.mrna1;Target=FBgn0037140.1 1 203 +
Chr1	stalkie_big_nohaplotig	exon	67784716	67784953	100	+	.	Parent=FBgn0037140.1.mrna1;Target=FBgn0037140.1 204 441 +
Chr1	stalkie_big_nohaplotig	exon	67785020	67785123	100	+	.	Parent=FBgn0037140.1.mrna1;Target=FBgn0037140.1 442 545 +
Chr1	stalkie_big_nohaplotig	exon	67785201	67785970	100	+	.	Parent=FBgn0037140.1.mrna1;Target=FBgn0037140.1 546 1315 +
Chr1	stalkie_big_nohaplotig	exon	67786046	67786227	100	+	.	Parent=FBgn0037140.1.mrna1;Target=FBgn0037140.1 1316 1497 +
Chr1	stalkie_big_nohaplotig	exon	67786284	67786454	100	+	.	Parent=FBgn0037140.1.mrna1;Target=FBgn0037140.1 1498 1668 +
Chr1	stalkie_big_nohaplotig	CDS	67775044	67775246	.	+	0	Parent=FBgn0037140.1.mrna1;Target=FBgn0037140.1 1 203 +
Chr1	stalkie_big_nohaplotig	CDS	67784716	67784953	.	+	1	Parent=FBgn0037140.1.mrna1;Target=FBgn0037140.1 204 441 +
Chr1	stalkie_big_nohaplotig	CDS	67785020	67785123	.	+	0	Parent=FBgn0037140.1.mrna1;Target=FBgn0037140.1 442 545 +
Chr1	stalkie_big_nohaplotig	CDS	67785201	67785970	.	+	1	Parent=FBgn0037140.1.mrna1;Target=FBgn0037140.1 546 1315 +
Chr1	stalkie_big_nohaplotig	CDS	67786046	67786227	.	+	2	Parent=FBgn0037140.1.mrna1;Target=FBgn0037140.1 1316 1497 +
Chr1	stalkie_big_nohaplotig	CDS	67786284	67786454	.	+	0	Parent=FBgn0037140.1.mrna1;Target=FBgn0037140.1 1498 1668 +
Chr1	gffcl	locus	67783522	67784613	.	-	.	ID=RLOC_00008744;geneIDs=comp155277_c2_seq1.path1;transcripts=comp155277_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67783522	67784613	.	-	.	ID=comp155277_c2_seq1.mrna1;geneID=comp155277_c2_seq1.path1;Name=comp155277_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1091;mismatches=1;indels=0;unknowns=0;Target=comp155277_c2_seq1 1092 1 .;CDS_Target=comp155277_c2_seq1 1012 920 .;locus=RLOC_00008744
Chr1	stalkie_big_nohaplotig	exon	67783522	67784613	99	-	.	Parent=comp155277_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67783602	67783694	.	-	0	Parent=comp155277_c2_seq1.mrna1
Chr1	gffcl	locus	67789331	67792466	.	-	.	ID=RLOC_00008745;geneIDs=FBgn0037141.1.path1;transcripts=FBgn0037141.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67789331	67792466	.	-	.	ID=FBgn0037141.1.mrna1;geneID=FBgn0037141.1.path1;Name=FBgn0037141.1;Dir=sensecoverage=100.0;identity=99.7;matches=2898;mismatches=9;indels=0;unknowns=0;locus=RLOC_00008745
Chr1	stalkie_big_nohaplotig	exon	67789331	67791251	99	-	.	Parent=FBgn0037141.1.mrna1;Target=FBgn0037141.1 987 2907 +
Chr1	stalkie_big_nohaplotig	exon	67791352	67791848	99	-	.	Parent=FBgn0037141.1.mrna1;Target=FBgn0037141.1 490 986 +
Chr1	stalkie_big_nohaplotig	exon	67791916	67792183	100	-	.	Parent=FBgn0037141.1.mrna1;Target=FBgn0037141.1 222 489 +
Chr1	stalkie_big_nohaplotig	exon	67792246	67792466	99	-	.	Parent=FBgn0037141.1.mrna1;Target=FBgn0037141.1 1 221 +
Chr1	stalkie_big_nohaplotig	CDS	67789331	67791251	.	-	1	Parent=FBgn0037141.1.mrna1;Target=FBgn0037141.1 987 2907 +
Chr1	stalkie_big_nohaplotig	CDS	67791352	67791848	.	-	0	Parent=FBgn0037141.1.mrna1;Target=FBgn0037141.1 490 986 +
Chr1	stalkie_big_nohaplotig	CDS	67791916	67792183	.	-	1	Parent=FBgn0037141.1.mrna1;Target=FBgn0037141.1 222 489 +
Chr1	stalkie_big_nohaplotig	CDS	67792246	67792466	.	-	0	Parent=FBgn0037141.1.mrna1;Target=FBgn0037141.1 1 221 +
Chr1	gffcl	locus	67794653	67804240	.	+	.	ID=RLOC_00008746;geneIDs=FBgn0037142.1.path1;transcripts=FBgn0037142.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67794653	67804240	.	+	.	ID=FBgn0037142.1.mrna1;geneID=FBgn0037142.1.path1;Name=FBgn0037142.1;Dir=sensecoverage=100.0;identity=99.9;matches=4761;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008746
Chr1	stalkie_big_nohaplotig	exon	67794653	67794689	100	+	.	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 1 37 +
Chr1	stalkie_big_nohaplotig	exon	67797864	67798172	100	+	.	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 38 346 +
Chr1	stalkie_big_nohaplotig	exon	67798234	67798529	99	+	.	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 347 642 +
Chr1	stalkie_big_nohaplotig	exon	67798602	67799258	99	+	.	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 643 1299 +
Chr1	stalkie_big_nohaplotig	exon	67799407	67799758	100	+	.	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 1300 1651 +
Chr1	stalkie_big_nohaplotig	exon	67799848	67800547	100	+	.	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 1652 2351 +
Chr1	stalkie_big_nohaplotig	exon	67800602	67801042	99	+	.	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 2352 2792 +
Chr1	stalkie_big_nohaplotig	exon	67801103	67801616	100	+	.	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 2793 3306 +
Chr1	stalkie_big_nohaplotig	exon	67801677	67802531	100	+	.	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 3307 4161 +
Chr1	stalkie_big_nohaplotig	exon	67802588	67802764	99	+	.	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 4162 4338 +
Chr1	stalkie_big_nohaplotig	exon	67803753	67803846	100	+	.	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 4339 4432 +
Chr1	stalkie_big_nohaplotig	exon	67803906	67804240	99	+	.	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 4433 4767 +
Chr1	stalkie_big_nohaplotig	CDS	67794653	67794689	.	+	0	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 1 37 +
Chr1	stalkie_big_nohaplotig	CDS	67797864	67798172	.	+	2	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 38 346 +
Chr1	stalkie_big_nohaplotig	CDS	67798234	67798529	.	+	2	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 347 642 +
Chr1	stalkie_big_nohaplotig	CDS	67798602	67799258	.	+	0	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 643 1299 +
Chr1	stalkie_big_nohaplotig	CDS	67799407	67799758	.	+	0	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 1300 1651 +
Chr1	stalkie_big_nohaplotig	CDS	67799848	67800547	.	+	2	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 1652 2351 +
Chr1	stalkie_big_nohaplotig	CDS	67800602	67801042	.	+	1	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 2352 2792 +
Chr1	stalkie_big_nohaplotig	CDS	67801103	67801616	.	+	1	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 2793 3306 +
Chr1	stalkie_big_nohaplotig	CDS	67801677	67802531	.	+	0	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 3307 4161 +
Chr1	stalkie_big_nohaplotig	CDS	67802588	67802764	.	+	0	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 4162 4338 +
Chr1	stalkie_big_nohaplotig	CDS	67803753	67803846	.	+	0	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 4339 4432 +
Chr1	stalkie_big_nohaplotig	CDS	67803906	67804240	.	+	2	Parent=FBgn0037142.1.mrna1;Target=FBgn0037142.1 4433 4767 +
Chr1	gffcl	locus	67805616	67807931	.	+	.	ID=RLOC_00008747;geneIDs=comp162810_c0_seq1.path1;transcripts=comp162810_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67805616	67807931	.	+	.	ID=comp162810_c0_seq1.mrna1;geneID=comp162810_c0_seq1.path1;Name=comp162810_c0_seq1;Dir=indeterminatecoverage=99.9;identity=94.6;matches=2253;mismatches=55;indels=73;unknowns=0;Target=comp162810_c0_seq1 2373 1 .;CDS_Target=comp162810_c0_seq1 2367 2242 .;locus=RLOC_00008747
Chr1	stalkie_big_nohaplotig	exon	67805616	67807931	94	+	.	Parent=comp162810_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67807800	67807925	.	+	0	Parent=comp162810_c0_seq1.mrna1
Chr1	gffcl	locus	67813319	67816680	.	+	.	ID=RLOC_00008748;geneIDs=FBgn0037144.1.path1;transcripts=FBgn0037144.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67813319	67816680	.	+	.	ID=FBgn0037144.1.mrna1;geneID=FBgn0037144.1.path1;Name=FBgn0037144.1;Dir=sensecoverage=100.0;identity=99.4;matches=1703;mismatches=10;indels=0;unknowns=0;locus=RLOC_00008748
Chr1	stalkie_big_nohaplotig	exon	67813319	67813536	99	+	.	Parent=FBgn0037144.1.mrna1;Target=FBgn0037144.1 1 218 +
Chr1	stalkie_big_nohaplotig	exon	67813667	67813922	100	+	.	Parent=FBgn0037144.1.mrna1;Target=FBgn0037144.1 219 474 +
Chr1	stalkie_big_nohaplotig	exon	67814006	67814109	100	+	.	Parent=FBgn0037144.1.mrna1;Target=FBgn0037144.1 475 578 +
Chr1	stalkie_big_nohaplotig	exon	67815418	67816187	99	+	.	Parent=FBgn0037144.1.mrna1;Target=FBgn0037144.1 579 1348 +
Chr1	stalkie_big_nohaplotig	exon	67816260	67816441	99	+	.	Parent=FBgn0037144.1.mrna1;Target=FBgn0037144.1 1349 1530 +
Chr1	stalkie_big_nohaplotig	exon	67816498	67816680	97	+	.	Parent=FBgn0037144.1.mrna1;Target=FBgn0037144.1 1531 1713 +
Chr1	stalkie_big_nohaplotig	CDS	67813319	67813536	.	+	0	Parent=FBgn0037144.1.mrna1;Target=FBgn0037144.1 1 218 +
Chr1	stalkie_big_nohaplotig	CDS	67813667	67813922	.	+	1	Parent=FBgn0037144.1.mrna1;Target=FBgn0037144.1 219 474 +
Chr1	stalkie_big_nohaplotig	CDS	67814006	67814109	.	+	0	Parent=FBgn0037144.1.mrna1;Target=FBgn0037144.1 475 578 +
Chr1	stalkie_big_nohaplotig	CDS	67815418	67816187	.	+	1	Parent=FBgn0037144.1.mrna1;Target=FBgn0037144.1 579 1348 +
Chr1	stalkie_big_nohaplotig	CDS	67816260	67816441	.	+	2	Parent=FBgn0037144.1.mrna1;Target=FBgn0037144.1 1349 1530 +
Chr1	stalkie_big_nohaplotig	CDS	67816498	67816680	.	+	0	Parent=FBgn0037144.1.mrna1;Target=FBgn0037144.1 1531 1713 +
Chr1	gffcl	locus	67817753	67820100	.	-	.	ID=RLOC_00008749;geneIDs=FBgn0035767.1.path1;transcripts=FBgn0035767.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67817753	67820100	.	-	.	ID=FBgn0035767.1.mrna1;geneID=FBgn0035767.1.path1;Name=FBgn0035767.1;Dir=sensecoverage=100.0;identity=99.5;matches=1747;mismatches=8;indels=0;unknowns=0;locus=RLOC_00008749
Chr1	stalkie_big_nohaplotig	exon	67817753	67817978	99	-	.	Parent=FBgn0035767.1.mrna1;Target=FBgn0035767.1 1530 1755 +
Chr1	stalkie_big_nohaplotig	exon	67818040	67818166	99	-	.	Parent=FBgn0035767.1.mrna1;Target=FBgn0035767.1 1403 1529 +
Chr1	stalkie_big_nohaplotig	exon	67818225	67818718	100	-	.	Parent=FBgn0035767.1.mrna1;Target=FBgn0035767.1 909 1402 +
Chr1	stalkie_big_nohaplotig	exon	67819030	67819181	99	-	.	Parent=FBgn0035767.1.mrna1;Target=FBgn0035767.1 757 908 +
Chr1	stalkie_big_nohaplotig	exon	67819276	67819782	99	-	.	Parent=FBgn0035767.1.mrna1;Target=FBgn0035767.1 250 756 +
Chr1	stalkie_big_nohaplotig	exon	67819852	67820100	98	-	.	Parent=FBgn0035767.1.mrna1;Target=FBgn0035767.1 1 249 +
Chr1	stalkie_big_nohaplotig	CDS	67817753	67817978	.	-	1	Parent=FBgn0035767.1.mrna1;Target=FBgn0035767.1 1530 1755 +
Chr1	stalkie_big_nohaplotig	CDS	67818040	67818166	.	-	2	Parent=FBgn0035767.1.mrna1;Target=FBgn0035767.1 1403 1529 +
Chr1	stalkie_big_nohaplotig	CDS	67818225	67818718	.	-	1	Parent=FBgn0035767.1.mrna1;Target=FBgn0035767.1 909 1402 +
Chr1	stalkie_big_nohaplotig	CDS	67819030	67819181	.	-	0	Parent=FBgn0035767.1.mrna1;Target=FBgn0035767.1 757 908 +
Chr1	stalkie_big_nohaplotig	CDS	67819276	67819782	.	-	0	Parent=FBgn0035767.1.mrna1;Target=FBgn0035767.1 250 756 +
Chr1	stalkie_big_nohaplotig	CDS	67819852	67820100	.	-	0	Parent=FBgn0035767.1.mrna1;Target=FBgn0035767.1 1 249 +
Chr1	gffcl	locus	67841201	67845940	.	-	.	ID=RLOC_00008750;geneIDs=FBgn0040230.1.path1;transcripts=FBgn0040230.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67841201	67845940	.	-	.	ID=FBgn0040230.1.mrna1;geneID=FBgn0040230.1.path1;Name=FBgn0040230.1;Dir=sensecoverage=100.0;identity=99.8;matches=1974;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008750
Chr1	stalkie_big_nohaplotig	exon	67841201	67841222	100	-	.	Parent=FBgn0040230.1.mrna1;Target=FBgn0040230.1 1956 1977 +
Chr1	stalkie_big_nohaplotig	exon	67841276	67841463	100	-	.	Parent=FBgn0040230.1.mrna1;Target=FBgn0040230.1 1768 1955 +
Chr1	stalkie_big_nohaplotig	exon	67842365	67842554	100	-	.	Parent=FBgn0040230.1.mrna1;Target=FBgn0040230.1 1578 1767 +
Chr1	stalkie_big_nohaplotig	exon	67842615	67842736	100	-	.	Parent=FBgn0040230.1.mrna1;Target=FBgn0040230.1 1456 1577 +
Chr1	stalkie_big_nohaplotig	exon	67842790	67843359	99	-	.	Parent=FBgn0040230.1.mrna1;Target=FBgn0040230.1 886 1455 +
Chr1	stalkie_big_nohaplotig	exon	67843418	67844182	99	-	.	Parent=FBgn0040230.1.mrna1;Target=FBgn0040230.1 121 885 +
Chr1	stalkie_big_nohaplotig	exon	67845821	67845940	100	-	.	Parent=FBgn0040230.1.mrna1;Target=FBgn0040230.1 1 120 +
Chr1	stalkie_big_nohaplotig	CDS	67841201	67841222	.	-	1	Parent=FBgn0040230.1.mrna1;Target=FBgn0040230.1 1956 1977 +
Chr1	stalkie_big_nohaplotig	CDS	67841276	67841463	.	-	0	Parent=FBgn0040230.1.mrna1;Target=FBgn0040230.1 1768 1955 +
Chr1	stalkie_big_nohaplotig	CDS	67842365	67842554	.	-	1	Parent=FBgn0040230.1.mrna1;Target=FBgn0040230.1 1578 1767 +
Chr1	stalkie_big_nohaplotig	CDS	67842615	67842736	.	-	0	Parent=FBgn0040230.1.mrna1;Target=FBgn0040230.1 1456 1577 +
Chr1	stalkie_big_nohaplotig	CDS	67842790	67843359	.	-	0	Parent=FBgn0040230.1.mrna1;Target=FBgn0040230.1 886 1455 +
Chr1	stalkie_big_nohaplotig	CDS	67843418	67844182	.	-	0	Parent=FBgn0040230.1.mrna1;Target=FBgn0040230.1 121 885 +
Chr1	stalkie_big_nohaplotig	CDS	67845821	67845940	.	-	0	Parent=FBgn0040230.1.mrna1;Target=FBgn0040230.1 1 120 +
Chr1	gffcl	locus	67851869	67852731	.	-	.	ID=RLOC_00008751;geneIDs=CPIJ003423.path10;transcripts=CPIJ003423.mrna10
Chr1	stalkie_big_nohaplotig	mRNA	67851869	67852731	.	-	.	ID=CPIJ003423.mrna10;geneID=CPIJ003423.path10;Name=CPIJ003423;Dir=indeterminatecoverage=100.0;identity=99.8;matches=862;mismatches=1;indels=1;unknowns=0;Target=CPIJ003423 864 1 .;CDS_Target=CPIJ003423 864 31 .;locus=RLOC_00008751
Chr1	stalkie_big_nohaplotig	exon	67851869	67852731	99	-	.	Parent=CPIJ003423.mrna10
Chr1	stalkie_big_nohaplotig	CDS	67851869	67852702	.	-	0	Parent=CPIJ003423.mrna10
Chr1	gffcl	locus	67854049	67855315	.	+	.	ID=RLOC_00008752;geneIDs=FBgn0036813.1.path1;transcripts=FBgn0036813.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67854049	67855315	.	+	.	ID=FBgn0036813.1.mrna1;geneID=FBgn0036813.1.path1;Name=FBgn0036813.1;Dir=sensecoverage=100.0;identity=100.0;matches=1038;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008752
Chr1	stalkie_big_nohaplotig	exon	67854049	67854168	100	+	.	Parent=FBgn0036813.1.mrna1;Target=FBgn0036813.1 1 120 +
Chr1	stalkie_big_nohaplotig	exon	67854225	67854360	100	+	.	Parent=FBgn0036813.1.mrna1;Target=FBgn0036813.1 121 256 +
Chr1	stalkie_big_nohaplotig	exon	67854413	67854603	100	+	.	Parent=FBgn0036813.1.mrna1;Target=FBgn0036813.1 257 447 +
Chr1	stalkie_big_nohaplotig	exon	67854663	67854977	100	+	.	Parent=FBgn0036813.1.mrna1;Target=FBgn0036813.1 448 762 +
Chr1	stalkie_big_nohaplotig	exon	67855040	67855315	100	+	.	Parent=FBgn0036813.1.mrna1;Target=FBgn0036813.1 763 1038 +
Chr1	stalkie_big_nohaplotig	CDS	67854049	67854168	.	+	0	Parent=FBgn0036813.1.mrna1;Target=FBgn0036813.1 1 120 +
Chr1	stalkie_big_nohaplotig	CDS	67854225	67854360	.	+	0	Parent=FBgn0036813.1.mrna1;Target=FBgn0036813.1 121 256 +
Chr1	stalkie_big_nohaplotig	CDS	67854413	67854603	.	+	2	Parent=FBgn0036813.1.mrna1;Target=FBgn0036813.1 257 447 +
Chr1	stalkie_big_nohaplotig	CDS	67854663	67854977	.	+	0	Parent=FBgn0036813.1.mrna1;Target=FBgn0036813.1 448 762 +
Chr1	stalkie_big_nohaplotig	CDS	67855040	67855315	.	+	0	Parent=FBgn0036813.1.mrna1;Target=FBgn0036813.1 763 1038 +
Chr1	gffcl	locus	67864990	67871178	.	-	.	ID=RLOC_00008753;geneIDs=Dp_FBgn0077431.1.path1,comp150499_c0_seq1.path1;transcripts=Dp_FBgn0077431.1.mrna1,comp150499_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67864990	67871178	.	-	.	ID=Dp_FBgn0077431.1.mrna1;geneID=Dp_FBgn0077431.1.path1;Name=Dp_FBgn0077431.1;Dir=sensecoverage=100.0;identity=100.0;matches=927;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008753
Chr1	stalkie_big_nohaplotig	exon	67864990	67865292	100	-	.	Parent=Dp_FBgn0077431.1.mrna1;Target=Dp_FBgn0077431.1 625 927 +
Chr1	stalkie_big_nohaplotig	exon	67865350	67865454	100	-	.	Parent=Dp_FBgn0077431.1.mrna1;Target=Dp_FBgn0077431.1 520 624 +
Chr1	stalkie_big_nohaplotig	exon	67865804	67865923	100	-	.	Parent=Dp_FBgn0077431.1.mrna1;Target=Dp_FBgn0077431.1 400 519 +
Chr1	stalkie_big_nohaplotig	exon	67870780	67871178	100	-	.	Parent=Dp_FBgn0077431.1.mrna1;Target=Dp_FBgn0077431.1 1 399 +
Chr1	stalkie_big_nohaplotig	CDS	67864990	67865292	.	-	0	Parent=Dp_FBgn0077431.1.mrna1;Target=Dp_FBgn0077431.1 625 927 +
Chr1	stalkie_big_nohaplotig	CDS	67865350	67865454	.	-	0	Parent=Dp_FBgn0077431.1.mrna1;Target=Dp_FBgn0077431.1 520 624 +
Chr1	stalkie_big_nohaplotig	CDS	67865804	67865923	.	-	0	Parent=Dp_FBgn0077431.1.mrna1;Target=Dp_FBgn0077431.1 400 519 +
Chr1	stalkie_big_nohaplotig	CDS	67870780	67871178	.	-	0	Parent=Dp_FBgn0077431.1.mrna1;Target=Dp_FBgn0077431.1 1 399 +
Chr1	stalkie_big_nohaplotig	mRNA	67865433	67865827	.	-	.	ID=comp150499_c0_seq1.mrna1;geneID=comp150499_c0_seq1.path1;Name=comp150499_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=394;mismatches=1;indels=0;unknowns=0;Target=comp150499_c0_seq1 395 1 .;CDS_Target=comp150499_c0_seq1 287 117 .;locus=RLOC_00008753
Chr1	stalkie_big_nohaplotig	exon	67865433	67865827	99	-	.	Parent=comp150499_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67865541	67865711	.	-	0	Parent=comp150499_c0_seq1.mrna1
Chr1	gffcl	locus	67879208	67882758	.	-	.	ID=RLOC_00008754;geneIDs=comp95711_c0_seq1.path1;transcripts=comp95711_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67879208	67882758	.	-	.	ID=comp95711_c0_seq1.mrna1;geneID=comp95711_c0_seq1.path1;Name=comp95711_c0_seq1;Dir=indeterminatecoverage=96.5;identity=99.8;matches=577;mismatches=1;indels=0;unknowns=0;Target=comp95711_c0_seq1 578 216 .;locus=RLOC_00008754
Chr1	stalkie_big_nohaplotig	exon	67879208	67879759	99	-	.	Parent=comp95711_c0_seq1.mrna1;Target=comp95711_c0_seq1 578 27 .
Chr1	stalkie_big_nohaplotig	exon	67882733	67882758	100	-	.	Parent=comp95711_c0_seq1.mrna1;Target=comp95711_c0_seq1 26 1 .
Chr1	stalkie_big_nohaplotig	CDS	67879208	67879570	.	-	0	Parent=comp95711_c0_seq1.mrna1
Chr1	gffcl	locus	67897810	67898350	.	-	.	ID=RLOC_00008756;geneIDs=comp113645_c0_seq1.path1;transcripts=comp113645_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67897810	67898350	.	-	.	ID=comp113645_c0_seq1.mrna1;geneID=comp113645_c0_seq1.path1;Name=comp113645_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.4;matches=538;mismatches=3;indels=0;unknowns=0;Target=comp113645_c0_seq1 542 2 .;CDS_Target=comp113645_c0_seq1 205 104 .;locus=RLOC_00008756
Chr1	stalkie_big_nohaplotig	exon	67897810	67898350	99	-	.	Parent=comp113645_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67898147	67898248	.	-	0	Parent=comp113645_c0_seq1.mrna1
Chr1	gffcl	locus	67908369	67908514	.	-	.	ID=RLOC_00008758;geneIDs=comp135128_c0_seq1.path3;transcripts=comp135128_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	67908369	67908514	.	-	.	ID=comp135128_c0_seq1.mrna3;geneID=comp135128_c0_seq1.path3;Name=comp135128_c0_seq1;Dir=indeterminatecoverage=46.9;identity=84.2;matches=123;mismatches=23;indels=0;unknowns=0;Target=comp135128_c0_seq1 309 164 .;CDS_Target=comp135128_c0_seq1 215 165 .;locus=RLOC_00008758
Chr1	stalkie_big_nohaplotig	exon	67908369	67908514	84	-	.	Parent=comp135128_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	67908463	67908513	.	-	0	Parent=comp135128_c0_seq1.mrna3
Chr1	gffcl	locus	67914317	67917144	.	-	.	ID=RLOC_00008759;geneIDs=FBgn0259175.1.path1;transcripts=FBgn0259175.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67914317	67917144	.	-	.	ID=FBgn0259175.1.mrna1;geneID=FBgn0259175.1.path1;Name=FBgn0259175.1;Dir=sensecoverage=99.8;identity=99.8;matches=2076;mismatches=4;indels=0;unknowns=0;locus=RLOC_00008759
Chr1	stalkie_big_nohaplotig	exon	67914317	67914427	99	-	.	Parent=FBgn0259175.1.mrna1;Target=FBgn0259175.1 1975 2085 +
Chr1	stalkie_big_nohaplotig	exon	67914657	67914862	99	-	.	Parent=FBgn0259175.1.mrna1;Target=FBgn0259175.1 1769 1974 +
Chr1	stalkie_big_nohaplotig	exon	67914915	67915075	99	-	.	Parent=FBgn0259175.1.mrna1;Target=FBgn0259175.1 1608 1768 +
Chr1	stalkie_big_nohaplotig	exon	67915139	67915308	100	-	.	Parent=FBgn0259175.1.mrna1;Target=FBgn0259175.1 1438 1607 +
Chr1	stalkie_big_nohaplotig	exon	67915479	67915699	100	-	.	Parent=FBgn0259175.1.mrna1;Target=FBgn0259175.1 1217 1437 +
Chr1	stalkie_big_nohaplotig	exon	67915761	67915874	100	-	.	Parent=FBgn0259175.1.mrna1;Target=FBgn0259175.1 1103 1216 +
Chr1	stalkie_big_nohaplotig	exon	67915936	67916281	100	-	.	Parent=FBgn0259175.1.mrna1;Target=FBgn0259175.1 757 1102 +
Chr1	stalkie_big_nohaplotig	exon	67916343	67916993	100	-	.	Parent=FBgn0259175.1.mrna1;Target=FBgn0259175.1 106 756 +
Chr1	stalkie_big_nohaplotig	exon	67917045	67917144	99	-	.	Parent=FBgn0259175.1.mrna1;Target=FBgn0259175.1 6 105 +
Chr1	stalkie_big_nohaplotig	CDS	67914317	67914427	.	-	0	Parent=FBgn0259175.1.mrna1;Target=FBgn0259175.1 1975 2085 +
Chr1	stalkie_big_nohaplotig	CDS	67914657	67914862	.	-	2	Parent=FBgn0259175.1.mrna1;Target=FBgn0259175.1 1769 1974 +
Chr1	stalkie_big_nohaplotig	CDS	67914915	67915075	.	-	1	Parent=FBgn0259175.1.mrna1;Target=FBgn0259175.1 1608 1768 +
Chr1	stalkie_big_nohaplotig	CDS	67915139	67915308	.	-	0	Parent=FBgn0259175.1.mrna1;Target=FBgn0259175.1 1438 1607 +
Chr1	stalkie_big_nohaplotig	CDS	67915479	67915699	.	-	2	Parent=FBgn0259175.1.mrna1;Target=FBgn0259175.1 1217 1437 +
Chr1	stalkie_big_nohaplotig	CDS	67915761	67915874	.	-	2	Parent=FBgn0259175.1.mrna1;Target=FBgn0259175.1 1103 1216 +
Chr1	stalkie_big_nohaplotig	CDS	67915936	67916281	.	-	0	Parent=FBgn0259175.1.mrna1;Target=FBgn0259175.1 757 1102 +
Chr1	stalkie_big_nohaplotig	CDS	67916343	67916993	.	-	0	Parent=FBgn0259175.1.mrna1;Target=FBgn0259175.1 106 756 +
Chr1	stalkie_big_nohaplotig	CDS	67917045	67917143	.	-	0	Parent=FBgn0259175.1.mrna1;Target=FBgn0259175.1 7 105 +
Chr1	gffcl	locus	67935064	67935596	.	-	.	ID=RLOC_00008760;geneIDs=comp79433_c0_seq1.path1;transcripts=comp79433_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	67935064	67935596	.	-	.	ID=comp79433_c0_seq1.mrna1;geneID=comp79433_c0_seq1.path1;Name=comp79433_c0_seq1;Dir=indeterminatecoverage=96.0;identity=100.0;matches=533;mismatches=0;indels=0;unknowns=0;Target=comp79433_c0_seq1 533 1 .;CDS_Target=comp79433_c0_seq1 533 3 .;locus=RLOC_00008760
Chr1	stalkie_big_nohaplotig	exon	67935064	67935596	100	-	.	Parent=comp79433_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	67935064	67935594	.	-	0	Parent=comp79433_c0_seq1.mrna1
Chr1	gffcl	locus	68008714	68009860	.	+	.	ID=RLOC_00008761;geneIDs=FBgn0036437.1.path1;transcripts=FBgn0036437.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	68008714	68009860	.	+	.	ID=FBgn0036437.1.mrna1;geneID=FBgn0036437.1.path1;Name=FBgn0036437.1;Dir=sensecoverage=100.0;identity=99.3;matches=599;mismatches=4;indels=0;unknowns=0;locus=RLOC_00008761
Chr1	stalkie_big_nohaplotig	exon	68008714	68008843	98	+	.	Parent=FBgn0036437.1.mrna1;Target=FBgn0036437.1 1 130 +
Chr1	stalkie_big_nohaplotig	exon	68008911	68009122	100	+	.	Parent=FBgn0036437.1.mrna1;Target=FBgn0036437.1 131 342 +
Chr1	stalkie_big_nohaplotig	exon	68009600	68009860	99	+	.	Parent=FBgn0036437.1.mrna1;Target=FBgn0036437.1 343 603 +
Chr1	stalkie_big_nohaplotig	CDS	68008714	68008843	.	+	0	Parent=FBgn0036437.1.mrna1;Target=FBgn0036437.1 1 130 +
Chr1	stalkie_big_nohaplotig	CDS	68008911	68009122	.	+	2	Parent=FBgn0036437.1.mrna1;Target=FBgn0036437.1 131 342 +
Chr1	stalkie_big_nohaplotig	CDS	68009600	68009860	.	+	0	Parent=FBgn0036437.1.mrna1;Target=FBgn0036437.1 343 603 +
Chr1	gffcl	locus	68029676	68038020	.	-	.	ID=RLOC_00008762;geneIDs=comp156245_c0_seq1.path1;transcripts=comp156245_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	68029676	68038020	.	-	.	ID=comp156245_c0_seq1.mrna1;geneID=comp156245_c0_seq1.path1;Name=comp156245_c0_seq1;Dir=antisensecoverage=96.2;identity=99.2;matches=920;mismatches=7;indels=0;unknowns=0;locus=RLOC_00008762
Chr1	stalkie_big_nohaplotig	exon	68029676	68030085	98	-	.	Parent=comp156245_c0_seq1.mrna1;Target=comp156245_c0_seq1 1 410 -
Chr1	stalkie_big_nohaplotig	exon	68037504	68038020	99	-	.	Parent=comp156245_c0_seq1.mrna1;Target=comp156245_c0_seq1 411 927 -
Chr1	stalkie_big_nohaplotig	CDS	68030080	68030085	.	-	0	Parent=comp156245_c0_seq1.mrna1;Target=comp156245_c0_seq1 405 410 .
Chr1	stalkie_big_nohaplotig	CDS	68037504	68037887	.	-	0	Parent=comp156245_c0_seq1.mrna1;Target=comp156245_c0_seq1 411 794 .
Chr1	gffcl	locus	68048131	68066679	.	+	.	ID=RLOC_00008763;geneIDs=FBgn0036436.1.path1;transcripts=FBgn0036436.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	68048131	68066679	.	+	.	ID=FBgn0036436.1.mrna1;geneID=FBgn0036436.1.path1;Name=FBgn0036436.1;Dir=sensecoverage=100.0;identity=99.2;matches=1185;mismatches=3;indels=6;unknowns=0;locus=RLOC_00008763
Chr1	stalkie_big_nohaplotig	exon	68048131	68048555	98	+	.	Parent=FBgn0036436.1.mrna1;Target=FBgn0036436.1 1 419 +
Chr1	stalkie_big_nohaplotig	exon	68065911	68066679	99	+	.	Parent=FBgn0036436.1.mrna1;Target=FBgn0036436.1 420 1188 +
Chr1	stalkie_big_nohaplotig	CDS	68048131	68048555	.	+	0	Parent=FBgn0036436.1.mrna1;Target=FBgn0036436.1 1 419 +
Chr1	stalkie_big_nohaplotig	CDS	68065911	68066679	.	+	1	Parent=FBgn0036436.1.mrna1;Target=FBgn0036436.1 420 1188 +
Chr1	gffcl	locus	68071061	68072983	.	+	.	ID=RLOC_00008764;geneIDs=comp158374_c1_seq1.path1;transcripts=comp158374_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	68071061	68072983	.	+	.	ID=comp158374_c1_seq1.mrna1;geneID=comp158374_c1_seq1.path1;Name=comp158374_c1_seq1;Dir=indeterminatecoverage=99.8;identity=99.0;matches=1905;mismatches=17;indels=3;unknowns=0;Target=comp158374_c1_seq1 1924 1 .;CDS_Target=comp158374_c1_seq1 747 577 .;locus=RLOC_00008764
Chr1	stalkie_big_nohaplotig	exon	68071061	68072983	98	+	.	Parent=comp158374_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	68071638	68071808	.	+	0	Parent=comp158374_c1_seq1.mrna1
Chr1	gffcl	locus	68084411	68085047	.	+	.	ID=RLOC_00008765;geneIDs=comp155222_c1_seq1.path1;transcripts=comp155222_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	68084411	68085047	.	+	.	ID=comp155222_c1_seq1.mrna1;geneID=comp155222_c1_seq1.path1;Name=comp155222_c1_seq1;Dir=indeterminatecoverage=99.2;identity=99.5;matches=634;mismatches=3;indels=0;unknowns=0;Target=comp155222_c1_seq1 637 1 .;CDS_Target=comp155222_c1_seq1 241 143 .;locus=RLOC_00008765
Chr1	stalkie_big_nohaplotig	exon	68084411	68085047	99	+	.	Parent=comp155222_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	68084553	68084651	.	+	0	Parent=comp155222_c1_seq1.mrna1
Chr1	gffcl	locus	68085525	68087231	.	+	.	ID=RLOC_00008766;geneIDs=FBgn0053260.1.path1;transcripts=FBgn0053260.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	68085525	68087231	.	+	.	ID=FBgn0053260.1.mrna1;geneID=FBgn0053260.1.path1;Name=FBgn0053260.1;Dir=sensecoverage=100.0;identity=99.3;matches=1028;mismatches=7;indels=0;unknowns=0;locus=RLOC_00008766
Chr1	stalkie_big_nohaplotig	exon	68085525	68085621	98	+	.	Parent=FBgn0053260.1.mrna1;Target=FBgn0053260.1 1 97 +
Chr1	stalkie_big_nohaplotig	exon	68086125	68086211	100	+	.	Parent=FBgn0053260.1.mrna1;Target=FBgn0053260.1 98 184 +
Chr1	stalkie_big_nohaplotig	exon	68086270	68086542	98	+	.	Parent=FBgn0053260.1.mrna1;Target=FBgn0053260.1 185 457 +
Chr1	stalkie_big_nohaplotig	exon	68086604	68086708	98	+	.	Parent=FBgn0053260.1.mrna1;Target=FBgn0053260.1 458 562 +
Chr1	stalkie_big_nohaplotig	exon	68086759	68087231	99	+	.	Parent=FBgn0053260.1.mrna1;Target=FBgn0053260.1 563 1035 +
Chr1	stalkie_big_nohaplotig	CDS	68085525	68085621	.	+	0	Parent=FBgn0053260.1.mrna1;Target=FBgn0053260.1 1 97 +
Chr1	stalkie_big_nohaplotig	CDS	68086125	68086211	.	+	2	Parent=FBgn0053260.1.mrna1;Target=FBgn0053260.1 98 184 +
Chr1	stalkie_big_nohaplotig	CDS	68086270	68086542	.	+	2	Parent=FBgn0053260.1.mrna1;Target=FBgn0053260.1 185 457 +
Chr1	stalkie_big_nohaplotig	CDS	68086604	68086708	.	+	2	Parent=FBgn0053260.1.mrna1;Target=FBgn0053260.1 458 562 +
Chr1	stalkie_big_nohaplotig	CDS	68086759	68087231	.	+	2	Parent=FBgn0053260.1.mrna1;Target=FBgn0053260.1 563 1035 +
Chr1	gffcl	locus	68106439	68107127	.	-	.	ID=RLOC_00008767;geneIDs=comp157882_c2_seq1.path2;transcripts=comp157882_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	68106439	68107127	.	-	.	ID=comp157882_c2_seq1.mrna2;geneID=comp157882_c2_seq1.path2;Name=comp157882_c2_seq1;Dir=sensecoverage=99.8;identity=83.7;matches=565;mismatches=54;indels=56;unknowns=0;Target=comp157882_c2_seq1 4 54 +;locus=RLOC_00008767
Chr1	stalkie_big_nohaplotig	exon	68106439	68106831	86	-	.	Parent=comp157882_c2_seq1.mrna2;Target=comp157882_c2_seq1 271 659 +
Chr1	stalkie_big_nohaplotig	exon	68106885	68107127	79	-	.	Parent=comp157882_c2_seq1.mrna2;Target=comp157882_c2_seq1 2 270 +
Chr1	stalkie_big_nohaplotig	CDS	68107074	68107125	.	-	0	Parent=comp157882_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	68206281	68208360	.	-	.	ID=comp157007_c4_seq1.mrna1;geneID=comp157007_c4_seq1.path1;Name=comp157007_c4_seq1;Dir=indeterminatecoverage=93.2;identity=82.0;matches=1273;mismatches=83;indels=197;unknowns=0;Target=comp157007_c4_seq1 1574 1389 .;locus=RLOC_00008768
Chr1	stalkie_big_nohaplotig	exon	68206281	68206836	77	-	.	Parent=comp157007_c4_seq1.mrna1;Target=comp157007_c4_seq1 1903 1247 .
Chr1	stalkie_big_nohaplotig	exon	68207507	68207533	92	-	.	Parent=comp157007_c4_seq1.mrna1;Target=comp157007_c4_seq1 1246 1220 .
Chr1	stalkie_big_nohaplotig	exon	68207536	68208360	85	-	.	Parent=comp157007_c4_seq1.mrna1;Target=comp157007_c4_seq1 870 54 .
Chr1	stalkie_big_nohaplotig	CDS	68206508	68206693	.	-	0	Parent=comp157007_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	68216337	69103377	.	+	.	ID=comp163275_c1_seq1.mrna1;geneID=comp163275_c1_seq1.path1;Name=comp163275_c1_seq1;Dir=indeterminatecoverage=99.4;identity=82.5;matches=2432;mismatches=154;indels=362;unknowns=87;locus=RLOC_00008772
Chr1	stalkie_big_nohaplotig	exon	68216337	68217506	98	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1195 23 .
Chr1	stalkie_big_nohaplotig	exon	68218411	68218412	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1197 1196 .
Chr1	stalkie_big_nohaplotig	exon	68221435	68221447	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1210 1198 .
Chr1	stalkie_big_nohaplotig	exon	68239472	68239514	48	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1249 1220 .
Chr1	stalkie_big_nohaplotig	exon	68239616	68239623	87	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1257 1250 .
Chr1	stalkie_big_nohaplotig	exon	68239804	68239966	34	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1318 1258 .
Chr1	stalkie_big_nohaplotig	exon	68240240	68240248	66	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1327 1319 .
Chr1	stalkie_big_nohaplotig	exon	68240306	68240337	43	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1346 1328 .
Chr1	stalkie_big_nohaplotig	exon	68241763	68241783	46	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1378 1347 .
Chr1	stalkie_big_nohaplotig	exon	68269646	68269654	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1387 1379 .
Chr1	stalkie_big_nohaplotig	exon	68279335	68279360	68	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1472 1447 .
Chr1	stalkie_big_nohaplotig	exon	68286500	68286508	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1486 1478 .
Chr1	stalkie_big_nohaplotig	exon	68291829	68291837	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1497 1489 .
Chr1	stalkie_big_nohaplotig	exon	68314709	68314809	54	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1637 1498 .
Chr1	stalkie_big_nohaplotig	exon	68316668	68316713	21	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1647 1638 .
Chr1	stalkie_big_nohaplotig	exon	68317366	68317371	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1653 1648 .
Chr1	stalkie_big_nohaplotig	exon	68330014	68330020	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1660 1654 .
Chr1	stalkie_big_nohaplotig	exon	68334377	68334421	61	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1707 1661 .
Chr1	stalkie_big_nohaplotig	exon	68340833	68340837	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1712 1708 .
Chr1	stalkie_big_nohaplotig	exon	68341915	68341917	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1715 1713 .
Chr1	stalkie_big_nohaplotig	exon	68349082	68349087	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1721 1716 .
Chr1	stalkie_big_nohaplotig	exon	68364852	68364854	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1724 1722 .
Chr1	stalkie_big_nohaplotig	exon	68365030	68365042	84	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1736 1725 .
Chr1	stalkie_big_nohaplotig	exon	68377345	68377356	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1748 1737 .
Chr1	stalkie_big_nohaplotig	exon	68381467	68381481	66	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1817 1807 .
Chr1	stalkie_big_nohaplotig	exon	68392532	68392540	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1838 1830 .
Chr1	stalkie_big_nohaplotig	exon	68405362	68405413	53	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1886 1839 .
Chr1	stalkie_big_nohaplotig	exon	68413180	68413187	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1894 1887 .
Chr1	stalkie_big_nohaplotig	exon	68421226	68421231	83	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1900 1895 .
Chr1	stalkie_big_nohaplotig	exon	68424924	68424933	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1910 1901 .
Chr1	stalkie_big_nohaplotig	exon	68428698	68428707	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1938 1929 .
Chr1	stalkie_big_nohaplotig	exon	68441081	68441092	25	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2049 2003 .
Chr1	stalkie_big_nohaplotig	exon	68455538	68455548	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2060 2050 .
Chr1	stalkie_big_nohaplotig	exon	68463672	68463674	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2069 2067 .
Chr1	stalkie_big_nohaplotig	exon	68471512	68471525	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2083 2070 .
Chr1	stalkie_big_nohaplotig	exon	68485246	68485253	25	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2086 2085 .
Chr1	stalkie_big_nohaplotig	exon	68485417	68485425	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2137 2129 .
Chr1	stalkie_big_nohaplotig	exon	68517897	68517917	80	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2193 2173 .
Chr1	stalkie_big_nohaplotig	exon	68522455	68522457	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2196 2194 .
Chr1	stalkie_big_nohaplotig	exon	68551844	68551855	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2217 2206 .
Chr1	stalkie_big_nohaplotig	exon	68551870	68551871	25	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2231 2228 .
Chr1	stalkie_big_nohaplotig	exon	68580915	68580922	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2239 2232 .
Chr1	stalkie_big_nohaplotig	exon	68640581	68640583	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2294 2292 .
Chr1	stalkie_big_nohaplotig	exon	68647229	68647233	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2299 2295 .
Chr1	stalkie_big_nohaplotig	exon	68652474	68652481	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2307 2300 .
Chr1	stalkie_big_nohaplotig	exon	68653591	68653662	45	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2431 2316 .
Chr1	stalkie_big_nohaplotig	exon	68665756	68665765	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2441 2432 .
Chr1	stalkie_big_nohaplotig	exon	68671562	68671600	52	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2487 2442 .
Chr1	stalkie_big_nohaplotig	exon	68672771	68672775	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2553 2549 .
Chr1	stalkie_big_nohaplotig	exon	68675047	68675051	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2558 2554 .
Chr1	stalkie_big_nohaplotig	exon	68677005	68677013	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2567 2559 .
Chr1	stalkie_big_nohaplotig	exon	68677015	68677023	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2578 2570 .
Chr1	stalkie_big_nohaplotig	exon	68679568	68679578	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2595 2585 .
Chr1	stalkie_big_nohaplotig	exon	68687701	68687711	81	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2740 2730 .
Chr1	stalkie_big_nohaplotig	exon	68706585	68706589	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2745 2741 .
Chr1	stalkie_big_nohaplotig	exon	68710289	68710293	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2750 2746 .
Chr1	stalkie_big_nohaplotig	exon	68710946	68710957	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2762 2751 .
Chr1	stalkie_big_nohaplotig	exon	68712139	68712153	80	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2777 2763 .
Chr1	stalkie_big_nohaplotig	exon	68720346	68720351	83	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2783 2778 .
Chr1	stalkie_big_nohaplotig	exon	68722474	68722481	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2791 2784 .
Chr1	stalkie_big_nohaplotig	exon	68726859	68726867	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2800 2792 .
Chr1	stalkie_big_nohaplotig	exon	68727368	68727372	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2805 2801 .
Chr1	stalkie_big_nohaplotig	exon	68734278	68734280	100	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2808 2806 .
Chr1	stalkie_big_nohaplotig	exon	68739261	68739316	65	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 2876 2809 .
Chr1	stalkie_big_nohaplotig	exon	69102806	69103377	98	+	.	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 3479 2908 .
Chr1	stalkie_big_nohaplotig	CDS	68216337	68217506	.	+	0	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1195 23 .
Chr1	stalkie_big_nohaplotig	CDS	68218411	68218412	.	+	0	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1197 1196 .
Chr1	stalkie_big_nohaplotig	CDS	68221435	68221447	.	+	1	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1210 1198 .
Chr1	stalkie_big_nohaplotig	CDS	68239472	68239514	.	+	0	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1249 1220 .
Chr1	stalkie_big_nohaplotig	CDS	68239616	68239623	.	+	2	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1257 1250 .
Chr1	stalkie_big_nohaplotig	CDS	68239804	68239966	.	+	0	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1318 1258 .
Chr1	stalkie_big_nohaplotig	CDS	68240240	68240248	.	+	2	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1327 1319 .
Chr1	stalkie_big_nohaplotig	CDS	68240306	68240337	.	+	2	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1346 1328 .
Chr1	stalkie_big_nohaplotig	CDS	68241763	68241783	.	+	0	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1378 1347 .
Chr1	stalkie_big_nohaplotig	CDS	68269646	68269654	.	+	0	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1387 1379 .
Chr1	stalkie_big_nohaplotig	CDS	68279335	68279360	.	+	0	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1472 1447 .
Chr1	stalkie_big_nohaplotig	CDS	68286500	68286508	.	+	1	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1486 1478 .
Chr1	stalkie_big_nohaplotig	CDS	68291829	68291835	.	+	1	Parent=comp163275_c1_seq1.mrna1;Target=comp163275_c1_seq1 1495 1489 .
Chr1	gffcl	locus	68276551	68276780	.	+	.	ID=RLOC_00008773;geneIDs=comp145962_c0_seq1.path1;transcripts=comp145962_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	68276551	68276780	.	+	.	ID=comp145962_c0_seq1.mrna1;geneID=comp145962_c0_seq1.path1;Name=comp145962_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.1;matches=228;mismatches=2;indels=0;unknowns=0;Target=comp145962_c0_seq1 231 2 .;CDS_Target=comp145962_c0_seq1 213 178 .;locus=RLOC_00008773
Chr1	stalkie_big_nohaplotig	exon	68276551	68276780	99	+	.	Parent=comp145962_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	68276727	68276762	.	+	0	Parent=comp145962_c0_seq1.mrna1
Chr1	gffcl	locus	68277262	68278196	.	-	.	ID=RLOC_00008774;geneIDs=comp151120_c1_seq1.path1;transcripts=comp151120_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	68277262	68278196	.	-	.	ID=comp151120_c1_seq1.mrna1;geneID=comp151120_c1_seq1.path1;Name=comp151120_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=914;mismatches=15;indels=6;unknowns=0;Target=comp151120_c1_seq1 929 1 .;CDS_Target=comp151120_c1_seq1 874 734 .;locus=RLOC_00008774
Chr1	stalkie_big_nohaplotig	exon	68277262	68278196	97	-	.	Parent=comp151120_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	68277317	68277457	.	-	0	Parent=comp151120_c1_seq1.mrna1
Chr1	gffcl	locus	68318337	68319782	.	+	.	ID=RLOC_00008776;geneIDs=FBgn0039711.3.path1;transcripts=FBgn0039711.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	68318337	68319782	.	+	.	ID=FBgn0039711.3.mrna1;geneID=FBgn0039711.3.path1;Name=FBgn0039711.3;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1446;mismatches=0;indels=0;unknowns=0;Target=FBgn0039711.3 1446 1 .;locus=RLOC_00008776
Chr1	stalkie_big_nohaplotig	exon	68318337	68319782	100	+	.	Parent=FBgn0039711.3.mrna1
Chr1	stalkie_big_nohaplotig	CDS	68318337	68319782	.	+	0	Parent=FBgn0039711.3.mrna1
Chr1	gffcl	locus	68382387	68405024	.	+	.	ID=RLOC_00008778;geneIDs=comp163189_c1_seq1.path1;transcripts=comp163189_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	68382387	68405024	.	+	.	ID=comp163189_c1_seq1.mrna1;geneID=comp163189_c1_seq1.path1;Name=comp163189_c1_seq1;Dir=indeterminatecoverage=100.0;identity=95.0;matches=3478;mismatches=128;indels=55;unknowns=0;Target=comp163189_c1_seq1 416 369 .;locus=RLOC_00008778
Chr1	stalkie_big_nohaplotig	exon	68382387	68383407	94	+	.	Parent=comp163189_c1_seq1.mrna1;Target=comp163189_c1_seq1 1010 1 .
Chr1	stalkie_big_nohaplotig	exon	68399469	68399502	87	+	.	Parent=comp163189_c1_seq1.mrna1;Target=comp163189_c1_seq1 1049 1011 .
Chr1	stalkie_big_nohaplotig	exon	68400048	68400126	96	+	.	Parent=comp163189_c1_seq1.mrna1;Target=comp163189_c1_seq1 1128 1050 .
Chr1	stalkie_big_nohaplotig	exon	68400416	68400852	97	+	.	Parent=comp163189_c1_seq1.mrna1;Target=comp163189_c1_seq1 1584 1149 .
Chr1	stalkie_big_nohaplotig	exon	68402977	68405024	94	+	.	Parent=comp163189_c1_seq1.mrna1;Target=comp163189_c1_seq1 3971 1890 .
Chr1	stalkie_big_nohaplotig	CDS	68382764	68382811	.	+	0	Parent=comp163189_c1_seq1.mrna1
Chr1	gffcl	locus	68528811	68529778	.	+	.	ID=RLOC_00008780;geneIDs=comp162746_c0_seq1.path9;transcripts=comp162746_c0_seq1.mrna9
Chr1	stalkie_big_nohaplotig	mRNA	68528811	68529778	.	+	.	ID=comp162746_c0_seq1.mrna9;geneID=comp162746_c0_seq1.path9;Name=comp162746_c0_seq1;Dir=indeterminatecoverage=89.1;identity=99.4;matches=962;mismatches=6;indels=0;unknowns=0;Target=comp162746_c0_seq1 1067 100 .;CDS_Target=comp162746_c0_seq1 961 521 .;locus=RLOC_00008780
Chr1	stalkie_big_nohaplotig	exon	68528811	68529778	99	+	.	Parent=comp162746_c0_seq1.mrna9
Chr1	stalkie_big_nohaplotig	CDS	68529232	68529672	.	+	0	Parent=comp162746_c0_seq1.mrna9
Chr1	gffcl	locus	68591317	68593664	.	-	.	ID=RLOC_00008781;geneIDs=comp156471_c0_seq1.path1;transcripts=comp156471_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	68591317	68593664	.	-	.	ID=comp156471_c0_seq1.mrna1;geneID=comp156471_c0_seq1.path1;Name=comp156471_c0_seq1;Dir=indeterminatecoverage=99.4;identity=96.6;matches=2277;mismatches=23;indels=57;unknowns=0;Target=comp156471_c0_seq1 2322 14 .;CDS_Target=comp156471_c0_seq1 404 15 .;locus=RLOC_00008781
Chr1	stalkie_big_nohaplotig	exon	68591317	68593664	96	-	.	Parent=comp156471_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	68593227	68593663	.	-	0	Parent=comp156471_c0_seq1.mrna1
Chr1	gffcl	locus	68605649	68607802	.	-	.	ID=RLOC_00008782;geneIDs=comp158726_c3_seq1.path1;transcripts=comp158726_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	68605649	68607802	.	-	.	ID=comp158726_c3_seq1.mrna1;geneID=comp158726_c3_seq1.path1;Name=comp158726_c3_seq1;Dir=sensecoverage=99.9;identity=96.7;matches=1809;mismatches=11;indels=51;unknowns=0;Target=comp158726_c3_seq1 1003 1749 +;locus=RLOC_00008782
Chr1	stalkie_big_nohaplotig	exon	68605649	68607450	96	-	.	Parent=comp158726_c3_seq1.mrna1;Target=comp158726_c3_seq1 20 1872 +
Chr1	stalkie_big_nohaplotig	exon	68607785	68607802	94	-	.	Parent=comp158726_c3_seq1.mrna1;Target=comp158726_c3_seq1 2 19 +
Chr1	stalkie_big_nohaplotig	CDS	68605772	68606518	.	-	0	Parent=comp158726_c3_seq1.mrna1
Chr1	gffcl	locus	68623061	68623130	.	+	.	ID=RLOC_00008783;geneIDs=comp156650_c2_seq1.path2;transcripts=comp156650_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	68623061	68623130	.	+	.	ID=comp156650_c2_seq1.mrna2;geneID=comp156650_c2_seq1.path2;Name=comp156650_c2_seq1;Dir=indeterminatecoverage=11.6;identity=100.0;matches=70;mismatches=0;indels=0;unknowns=0;Target=comp156650_c2_seq1 603 534 .;locus=RLOC_00008783
Chr1	stalkie_big_nohaplotig	exon	68623061	68623130	100	+	.	Parent=comp156650_c2_seq1.mrna2
Chr1	gffcl	locus	68836167	68836755	.	+	.	ID=RLOC_00008786;geneIDs=comp151107_c1_seq1.path1;transcripts=comp151107_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	68836167	68836755	.	+	.	ID=comp151107_c1_seq1.mrna1;geneID=comp151107_c1_seq1.path1;Name=comp151107_c1_seq1;Dir=indeterminatecoverage=100.0;identity=96.3;matches=579;mismatches=9;indels=13;unknowns=0;Target=comp151107_c1_seq1 600 1 .;CDS_Target=comp151107_c1_seq1 153 1 .;locus=RLOC_00008786
Chr1	stalkie_big_nohaplotig	exon	68836167	68836755	96	+	.	Parent=comp151107_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	68836167	68836319	.	+	0	Parent=comp151107_c1_seq1.mrna1
Chr1	gffcl	locus	68837964	68838313	.	+	.	ID=RLOC_00008787;geneIDs=comp116032_c0_seq1.path1;transcripts=comp116032_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	68837964	68838313	.	+	.	ID=comp116032_c0_seq1.mrna1;geneID=comp116032_c0_seq1.path1;Name=comp116032_c0_seq1;Dir=indeterminatecoverage=84.4;identity=88.6;matches=310;mismatches=4;indels=36;unknowns=0;Target=comp116032_c0_seq1 337 24 .;CDS_Target=comp116032_c0_seq1 113 24 .;locus=RLOC_00008787
Chr1	stalkie_big_nohaplotig	exon	68837964	68838313	88	+	.	Parent=comp116032_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	68837964	68838089	.	+	0	Parent=comp116032_c0_seq1.mrna1
Chr1	gffcl	locus	68838412	68838776	.	+	.	ID=RLOC_00008788;geneIDs=comp147455_c0_seq1.path1;transcripts=comp147455_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	68838412	68838776	.	+	.	ID=comp147455_c0_seq1.mrna1;geneID=comp147455_c0_seq1.path1;Name=comp147455_c0_seq1;Dir=indeterminatecoverage=88.4;identity=99.2;matches=362;mismatches=3;indels=0;unknowns=0;Target=comp147455_c0_seq1 407 43 .;CDS_Target=comp147455_c0_seq1 301 227 .;locus=RLOC_00008788
Chr1	stalkie_big_nohaplotig	exon	68838412	68838776	99	+	.	Parent=comp147455_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	68838596	68838670	.	+	0	Parent=comp147455_c0_seq1.mrna1
Chr1	gffcl	locus	68985540	68985930	.	-	.	ID=RLOC_00008790;geneIDs=Dp_FBgn0245446.path1;transcripts=Dp_FBgn0245446.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	68985540	68985930	.	-	.	ID=Dp_FBgn0245446.mrna1;geneID=Dp_FBgn0245446.path1;Name=Dp_FBgn0245446;Dir=indeterminatecoverage=100.0;identity=86.4;matches=338;mismatches=19;indels=34;unknowns=0;Target=Dp_FBgn0245446 357 1 .;locus=RLOC_00008790
Chr1	stalkie_big_nohaplotig	exon	68985540	68985930	86	-	.	Parent=Dp_FBgn0245446.mrna1
Chr1	stalkie_big_nohaplotig	CDS	68985540	68985930	.	-	0	Parent=Dp_FBgn0245446.mrna1
Chr1	gffcl	locus	68993103	68993643	.	-	.	ID=RLOC_00008791;geneIDs=Dv_FBgn0206941.4.path2;transcripts=Dv_FBgn0206941.4.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	68993103	68993643	.	-	.	ID=Dv_FBgn0206941.4.mrna2;geneID=Dv_FBgn0206941.4.path2;Name=Dv_FBgn0206941.4;Dir=indeterminatecoverage=99.4;identity=92.9;matches=443;mismatches=33;indels=1;unknowns=0;Target=Dv_FBgn0206941.4 504 130 .;locus=RLOC_00008791
Chr1	stalkie_big_nohaplotig	exon	68993103	68993545	92	-	.	Parent=Dv_FBgn0206941.4.mrna2;Target=Dv_FBgn0206941.4 504 61 .
Chr1	stalkie_big_nohaplotig	exon	68993611	68993643	96	-	.	Parent=Dv_FBgn0206941.4.mrna2;Target=Dv_FBgn0206941.4 36 4 .
Chr1	stalkie_big_nohaplotig	CDS	68993103	68993477	.	-	0	Parent=Dv_FBgn0206941.4.mrna2
Chr1	gffcl	locus	69053423	69841381	.	+	.	ID=RLOC_00008793;geneIDs=comp149904_c0_seq1.path2;transcripts=comp149904_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	69053423	69841381	.	+	.	ID=comp149904_c0_seq1.mrna2;geneID=comp149904_c0_seq1.path2;Name=comp149904_c0_seq1;Dir=indeterminatecoverage=15.3;identity=90.1;matches=109;mismatches=7;indels=5;unknowns=0;locus=RLOC_00008793
Chr1	stalkie_big_nohaplotig	exon	69053423	69053451	86	+	.	Parent=comp149904_c0_seq1.mrna2;Target=comp149904_c0_seq1 700 671 .
Chr1	stalkie_big_nohaplotig	exon	69841295	69841381	91	+	.	Parent=comp149904_c0_seq1.mrna2;Target=comp149904_c0_seq1 791 701 .
Chr1	gffcl	locus	69118699	69119274	.	-	.	ID=RLOC_00008794;geneIDs=comp158500_c0_seq1.path3;transcripts=comp158500_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	69118699	69119274	.	-	.	ID=comp158500_c0_seq1.mrna3;geneID=comp158500_c0_seq1.path3;Name=comp158500_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=560;mismatches=13;indels=3;unknowns=0;Target=comp158500_c0_seq1 573 1 .;CDS_Target=comp158500_c0_seq1 571 410 .;locus=RLOC_00008794
Chr1	stalkie_big_nohaplotig	exon	69118699	69119274	97	-	.	Parent=comp158500_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	69118701	69118862	.	-	0	Parent=comp158500_c0_seq1.mrna3
Chr1	gffcl	locus	69124429	69124928	.	-	.	ID=RLOC_00008795;geneIDs=comp115116_c1_seq1.path1;transcripts=comp115116_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	69124429	69124928	.	-	.	ID=comp115116_c1_seq1.mrna1;geneID=comp115116_c1_seq1.path1;Name=comp115116_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=500;mismatches=0;indels=0;unknowns=0;Target=comp115116_c1_seq1 500 1 .;CDS_Target=comp115116_c1_seq1 96 1 .;locus=RLOC_00008795
Chr1	stalkie_big_nohaplotig	exon	69124429	69124928	100	-	.	Parent=comp115116_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	69124833	69124928	.	-	0	Parent=comp115116_c1_seq1.mrna1
Chr1	gffcl	locus	69158116	69160196	.	-	.	ID=RLOC_00008796;geneIDs=comp163899_c0_seq1.path7;transcripts=comp163899_c0_seq1.mrna7
Chr1	stalkie_big_nohaplotig	mRNA	69158116	69160196	.	-	.	ID=comp163899_c0_seq1.mrna7;geneID=comp163899_c0_seq1.path7;Name=comp163899_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=2052;mismatches=4;indels=26;unknowns=0;Target=comp163899_c0_seq1 2057 1 .;CDS_Target=comp163899_c0_seq1 542 393 .;locus=RLOC_00008796
Chr1	stalkie_big_nohaplotig	exon	69158116	69160196	98	-	.	Parent=comp163899_c0_seq1.mrna7
Chr1	stalkie_big_nohaplotig	CDS	69159656	69159804	.	-	0	Parent=comp163899_c0_seq1.mrna7
Chr1	gffcl	locus	69260186	69262059	.	-	.	ID=RLOC_00008798;geneIDs=FBgn0052196.1.path1;transcripts=FBgn0052196.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	69260186	69262059	.	-	.	ID=FBgn0052196.1.mrna1;geneID=FBgn0052196.1.path1;Name=FBgn0052196.1;Dir=sensecoverage=100.0;identity=97.5;matches=667;mismatches=17;indels=0;unknowns=0;locus=RLOC_00008798
Chr1	stalkie_big_nohaplotig	exon	69260186	69260498	97	-	.	Parent=FBgn0052196.1.mrna1;Target=FBgn0052196.1 372 684 +
Chr1	stalkie_big_nohaplotig	exon	69260564	69260697	97	-	.	Parent=FBgn0052196.1.mrna1;Target=FBgn0052196.1 238 371 +
Chr1	stalkie_big_nohaplotig	exon	69261172	69261275	100	-	.	Parent=FBgn0052196.1.mrna1;Target=FBgn0052196.1 134 237 +
Chr1	stalkie_big_nohaplotig	exon	69261927	69262059	95	-	.	Parent=FBgn0052196.1.mrna1;Target=FBgn0052196.1 1 133 +
Chr1	stalkie_big_nohaplotig	CDS	69260186	69260498	.	-	1	Parent=FBgn0052196.1.mrna1;Target=FBgn0052196.1 372 684 +
Chr1	stalkie_big_nohaplotig	CDS	69260564	69260697	.	-	0	Parent=FBgn0052196.1.mrna1;Target=FBgn0052196.1 238 371 +
Chr1	stalkie_big_nohaplotig	CDS	69261172	69261275	.	-	2	Parent=FBgn0052196.1.mrna1;Target=FBgn0052196.1 134 237 +
Chr1	stalkie_big_nohaplotig	CDS	69261927	69262008	.	-	0	Parent=FBgn0052196.1.mrna1;Target=FBgn0052196.1 52 133 +
Chr1	stalkie_big_nohaplotig	mRNA	69295647	69300950	.	-	.	ID=comp163973_c0_seq1.mrna1;geneID=comp163973_c0_seq1.path1;Name=comp163973_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.4;matches=5277;mismatches=26;indels=4;unknowns=0;Target=comp163973_c0_seq1 5330 25 .;CDS_Target=comp163973_c0_seq1 842 627 .;locus=RLOC_00008799
Chr1	stalkie_big_nohaplotig	exon	69295647	69300950	99	-	.	Parent=comp163973_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	69300135	69300348	.	-	0	Parent=comp163973_c0_seq1.mrna1
Chr1	gffcl	locus	69312897	69314405	.	+	.	ID=RLOC_00008801;geneIDs=comp158306_c0_seq1.path1;transcripts=comp158306_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	69312897	69314405	.	+	.	ID=comp158306_c0_seq1.mrna1;geneID=comp158306_c0_seq1.path1;Name=comp158306_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.9;matches=1498;mismatches=11;indels=6;unknowns=0;Target=comp158306_c0_seq1 1515 1 .;CDS_Target=comp158306_c0_seq1 452 339 .;locus=RLOC_00008801
Chr1	stalkie_big_nohaplotig	exon	69312897	69314405	98	+	.	Parent=comp158306_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	69313235	69313348	.	+	0	Parent=comp158306_c0_seq1.mrna1
Chr1	gffcl	locus	69315490	69316518	.	-	.	ID=RLOC_00008802;geneIDs=comp162128_c1_seq1.path1;transcripts=comp162128_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	69315490	69316518	.	-	.	ID=comp162128_c1_seq1.mrna1;geneID=comp162128_c1_seq1.path1;Name=comp162128_c1_seq1;Dir=antisensecoverage=100.0;identity=97.9;matches=903;mismatches=11;indels=8;unknowns=0;Target=comp162128_c1_seq1 404 619 .;locus=RLOC_00008802
Chr1	stalkie_big_nohaplotig	exon	69315490	69315868	97	-	.	Parent=comp162128_c1_seq1.mrna1;Target=comp162128_c1_seq1 1 380 -
Chr1	stalkie_big_nohaplotig	exon	69315918	69316248	99	-	.	Parent=comp162128_c1_seq1.mrna1;Target=comp162128_c1_seq1 381 712 -
Chr1	stalkie_big_nohaplotig	exon	69316314	69316518	95	-	.	Parent=comp162128_c1_seq1.mrna1;Target=comp162128_c1_seq1 713 921 -
Chr1	stalkie_big_nohaplotig	CDS	69315941	69316155	.	-	0	Parent=comp162128_c1_seq1.mrna1
Chr1	gffcl	locus	69321716	69325320	.	+	.	ID=RLOC_00008803;geneIDs=comp163721_c1_seq1.path1;transcripts=comp163721_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	69321716	69325320	.	+	.	ID=comp163721_c1_seq1.mrna1;geneID=comp163721_c1_seq1.path1;Name=comp163721_c1_seq1;Dir=sensecoverage=99.3;identity=98.3;matches=3260;mismatches=40;indels=15;unknowns=0;Target=comp163721_c1_seq1 243 458 +;locus=RLOC_00008803
Chr1	stalkie_big_nohaplotig	exon	69321716	69322427	95	+	.	Parent=comp163721_c1_seq1.mrna1;Target=comp163721_c1_seq1 24 738 +
Chr1	stalkie_big_nohaplotig	exon	69322503	69323278	99	+	.	Parent=comp163721_c1_seq1.mrna1;Target=comp163721_c1_seq1 739 1515 +
Chr1	stalkie_big_nohaplotig	exon	69323335	69323859	99	+	.	Parent=comp163721_c1_seq1.mrna1;Target=comp163721_c1_seq1 1516 2040 +
Chr1	stalkie_big_nohaplotig	exon	69323911	69324498	98	+	.	Parent=comp163721_c1_seq1.mrna1;Target=comp163721_c1_seq1 2041 2636 +
Chr1	stalkie_big_nohaplotig	exon	69324552	69324790	97	+	.	Parent=comp163721_c1_seq1.mrna1;Target=comp163721_c1_seq1 2637 2876 +
Chr1	stalkie_big_nohaplotig	exon	69324860	69325320	100	+	.	Parent=comp163721_c1_seq1.mrna1;Target=comp163721_c1_seq1 2877 3337 +
Chr1	stalkie_big_nohaplotig	CDS	69321936	69322151	.	+	0	Parent=comp163721_c1_seq1.mrna1
Chr1	gffcl	locus	69325964	69326510	.	-	.	ID=RLOC_00008804;geneIDs=comp163321_c2_seq1.path1;transcripts=comp163321_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	69325964	69326510	.	-	.	ID=comp163321_c2_seq1.mrna1;geneID=comp163321_c2_seq1.path1;Name=comp163321_c2_seq1;Dir=indeterminatecoverage=99.5;identity=89.2;matches=518;mismatches=29;indels=34;unknowns=0;Target=comp163321_c2_seq1 584 4 .;CDS_Target=comp163321_c2_seq1 224 141 .;locus=RLOC_00008804
Chr1	stalkie_big_nohaplotig	exon	69325964	69326510	89	-	.	Parent=comp163321_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	69326324	69326407	.	-	0	Parent=comp163321_c2_seq1.mrna1
Chr1	gffcl	locus	69330406	69331712	.	-	.	ID=RLOC_00008805;geneIDs=comp158776_c1_seq1.path1;transcripts=comp158776_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	69330406	69331712	.	-	.	ID=comp158776_c1_seq1.mrna1;geneID=comp158776_c1_seq1.path1;Name=comp158776_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1304;mismatches=3;indels=0;unknowns=0;Target=comp158776_c1_seq1 1307 1 .;CDS_Target=comp158776_c1_seq1 1307 3 .;locus=RLOC_00008805
Chr1	stalkie_big_nohaplotig	exon	69330406	69331712	99	-	.	Parent=comp158776_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	69330406	69331710	.	-	0	Parent=comp158776_c1_seq1.mrna1
Chr1	gffcl	locus	69385829	69400176	.	-	.	ID=RLOC_00008806;geneIDs=comp162651_c1_seq1.path1;transcripts=comp162651_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	69385829	69400176	.	-	.	ID=comp162651_c1_seq1.mrna1;geneID=comp162651_c1_seq1.path1;Name=comp162651_c1_seq1;Dir=indeterminatecoverage=99.5;identity=97.5;matches=5153;mismatches=36;indels=98;unknowns=0;Target=comp162651_c1_seq1 3836 3558 .;locus=RLOC_00008806
Chr1	stalkie_big_nohaplotig	exon	69385829	69391045	97	-	.	Parent=comp162651_c1_seq1.mrna1;Target=comp162651_c1_seq1 5270 42 .
Chr1	stalkie_big_nohaplotig	exon	69397654	69397655	100	-	.	Parent=comp162651_c1_seq1.mrna1;Target=comp162651_c1_seq1 41 40 .
Chr1	stalkie_big_nohaplotig	exon	69399066	69399071	100	-	.	Parent=comp162651_c1_seq1.mrna1;Target=comp162651_c1_seq1 39 34 .
Chr1	stalkie_big_nohaplotig	exon	69400170	69400176	100	-	.	Parent=comp162651_c1_seq1.mrna1;Target=comp162651_c1_seq1 33 27 .
Chr1	stalkie_big_nohaplotig	CDS	69387252	69387530	.	-	0	Parent=comp162651_c1_seq1.mrna1
Chr1	gffcl	locus	69398996	69399869	.	+	.	ID=RLOC_00008807;geneIDs=comp159319_c0_seq1.path1;transcripts=comp159319_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	69398996	69399869	.	+	.	ID=comp159319_c0_seq1.mrna1;geneID=comp159319_c0_seq1.path1;Name=comp159319_c0_seq1;Dir=antisensecoverage=100.0;identity=97.9;matches=755;mismatches=8;indels=8;unknowns=0;locus=RLOC_00008807
Chr1	stalkie_big_nohaplotig	exon	69398996	69399132	100	+	.	Parent=comp159319_c0_seq1.mrna1;Target=comp159319_c0_seq1 635 771 -
Chr1	stalkie_big_nohaplotig	exon	69399183	69399357	95	+	.	Parent=comp159319_c0_seq1.mrna1;Target=comp159319_c0_seq1 455 634 -
Chr1	stalkie_big_nohaplotig	exon	69399419	69399869	98	+	.	Parent=comp159319_c0_seq1.mrna1;Target=comp159319_c0_seq1 1 454 -
Chr1	stalkie_big_nohaplotig	CDS	69399079	69399132	.	+	0	Parent=comp159319_c0_seq1.mrna1;Target=comp159319_c0_seq1 635 688 .
Chr1	stalkie_big_nohaplotig	CDS	69399183	69399245	.	+	0	Parent=comp159319_c0_seq1.mrna1;Target=comp159319_c0_seq1 572 634 .
Chr1	gffcl	locus	69408296	69409159	.	-	.	ID=RLOC_00008809;geneIDs=CPIJ003423.path1;transcripts=CPIJ003423.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	69408296	69409159	.	-	.	ID=CPIJ003423.mrna1;geneID=CPIJ003423.path1;Name=CPIJ003423;Dir=indeterminatecoverage=100.0;identity=100.0;matches=864;mismatches=0;indels=0;unknowns=0;Target=CPIJ003423 864 1 .;locus=RLOC_00008809
Chr1	stalkie_big_nohaplotig	exon	69408296	69409159	100	-	.	Parent=CPIJ003423.mrna1
Chr1	stalkie_big_nohaplotig	CDS	69408296	69409159	.	-	0	Parent=CPIJ003423.mrna1
Chr1	gffcl	locus	69444459	69444764	.	+	.	ID=RLOC_00008810;geneIDs=comp157821_c1_seq1.path2;transcripts=comp157821_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	69444459	69444764	.	+	.	ID=comp157821_c1_seq1.mrna2;geneID=comp157821_c1_seq1.path2;Name=comp157821_c1_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=305;mismatches=1;indels=0;unknowns=0;Target=comp157821_c1_seq1 306 1 .;CDS_Target=comp157821_c1_seq1 187 65 .;locus=RLOC_00008810
Chr1	stalkie_big_nohaplotig	exon	69444459	69444764	99	+	.	Parent=comp157821_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	69444523	69444645	.	+	0	Parent=comp157821_c1_seq1.mrna2
Chr1	gffcl	locus	69477311	69478885	.	+	.	ID=RLOC_00008811;geneIDs=comp161759_c0_seq1.path2;transcripts=comp161759_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	69477311	69478885	.	+	.	ID=comp161759_c0_seq1.mrna2;geneID=comp161759_c0_seq1.path2;Name=comp161759_c0_seq1;Dir=indeterminatecoverage=76.5;identity=99.5;matches=1568;mismatches=7;indels=1;unknowns=0;Target=comp161759_c0_seq1 2058 483 .;CDS_Target=comp161759_c0_seq1 1732 1595 .;locus=RLOC_00008811
Chr1	stalkie_big_nohaplotig	exon	69477311	69478885	99	+	.	Parent=comp161759_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	69478423	69478560	.	+	0	Parent=comp161759_c0_seq1.mrna2
Chr1	gffcl	locus	69558638	69560307	.	-	.	ID=RLOC_00008812;geneIDs=comp158871_c0_seq1.path1;transcripts=comp158871_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	69558638	69560307	.	-	.	ID=comp158871_c0_seq1.mrna1;geneID=comp158871_c0_seq1.path1;Name=comp158871_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.2;matches=1656;mismatches=14;indels=0;unknowns=0;Target=comp158871_c0_seq1 1684 15 .;CDS_Target=comp158871_c0_seq1 1684 17 .;locus=RLOC_00008812
Chr1	stalkie_big_nohaplotig	exon	69558638	69560307	99	-	.	Parent=comp158871_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	69558638	69560305	.	-	0	Parent=comp158871_c0_seq1.mrna1
Chr1	gffcl	locus	69698840	69699954	.	-	.	ID=RLOC_00008813;geneIDs=comp157119_c0_seq1.path1;transcripts=comp157119_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	69698840	69699954	.	-	.	ID=comp157119_c0_seq1.mrna1;geneID=comp157119_c0_seq1.path1;Name=comp157119_c0_seq1;Dir=indeterminatecoverage=89.3;identity=98.7;matches=1101;mismatches=14;indels=0;unknowns=0;Target=comp157119_c0_seq1 1115 1 .;CDS_Target=comp157119_c0_seq1 634 290 .;locus=RLOC_00008813
Chr1	stalkie_big_nohaplotig	exon	69698840	69699954	98	-	.	Parent=comp157119_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	69699321	69699665	.	-	0	Parent=comp157119_c0_seq1.mrna1
Chr1	gffcl	locus	69700032	69700383	.	+	.	ID=RLOC_00008814;geneIDs=comp155606_c0_seq1.path1;transcripts=comp155606_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	69700032	69700383	.	+	.	ID=comp155606_c0_seq1.mrna1;geneID=comp155606_c0_seq1.path1;Name=comp155606_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.6;matches=342;mismatches=10;indels=2;unknowns=0;Target=comp155606_c0_seq1 354 1 .;CDS_Target=comp155606_c0_seq1 115 2 .;locus=RLOC_00008814
Chr1	stalkie_big_nohaplotig	exon	69700032	69700383	96	+	.	Parent=comp155606_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	69700033	69700146	.	+	0	Parent=comp155606_c0_seq1.mrna1
Chr1	gffcl	locus	69726656	69731177	.	+	.	ID=RLOC_00008815;geneIDs=comp162511_c0_seq1.path1;transcripts=comp162511_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	69726656	69731177	.	+	.	ID=comp162511_c0_seq1.mrna1;geneID=comp162511_c0_seq1.path1;Name=comp162511_c0_seq1;Dir=antisensecoverage=99.1;identity=93.8;matches=1821;mismatches=50;indels=70;unknowns=0;Target=comp162511_c0_seq1 1664 1792 .;locus=RLOC_00008815
Chr1	stalkie_big_nohaplotig	exon	69726656	69726808	96	+	.	Parent=comp162511_c0_seq1.mrna1;Target=comp162511_c0_seq1 1800 1955 -
Chr1	stalkie_big_nohaplotig	exon	69727202	69727343	91	+	.	Parent=comp162511_c0_seq1.mrna1;Target=comp162511_c0_seq1 1651 1799 -
Chr1	stalkie_big_nohaplotig	exon	69727389	69727733	88	+	.	Parent=comp162511_c0_seq1.mrna1;Target=comp162511_c0_seq1 1283 1650 -
Chr1	stalkie_big_nohaplotig	exon	69729736	69729983	94	+	.	Parent=comp162511_c0_seq1.mrna1;Target=comp162511_c0_seq1 1030 1282 -
Chr1	stalkie_big_nohaplotig	exon	69730051	69730316	98	+	.	Parent=comp162511_c0_seq1.mrna1;Target=comp162511_c0_seq1 764 1029 -
Chr1	stalkie_big_nohaplotig	exon	69730406	69730599	99	+	.	Parent=comp162511_c0_seq1.mrna1;Target=comp162511_c0_seq1 570 763 -
Chr1	stalkie_big_nohaplotig	exon	69730652	69731177	93	+	.	Parent=comp162511_c0_seq1.mrna1;Target=comp162511_c0_seq1 18 569 -
Chr1	stalkie_big_nohaplotig	CDS	69727209	69727332	.	+	0	Parent=comp162511_c0_seq1.mrna1
Chr1	gffcl	locus	69733920	69734956	.	-	.	ID=RLOC_00008816;geneIDs=comp154229_c0_seq1.path1;transcripts=comp154229_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	69733920	69734956	.	-	.	ID=comp154229_c0_seq1.mrna1;geneID=comp154229_c0_seq1.path1;Name=comp154229_c0_seq1;Dir=indeterminatecoverage=98.9;identity=100.0;matches=1037;mismatches=0;indels=0;unknowns=0;Target=comp154229_c0_seq1 1049 13 .;CDS_Target=comp154229_c0_seq1 197 15 .;locus=RLOC_00008816
Chr1	stalkie_big_nohaplotig	exon	69733920	69734956	100	-	.	Parent=comp154229_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	69734772	69734954	.	-	0	Parent=comp154229_c0_seq1.mrna1
Chr1	gffcl	locus	69808724	69809346	.	+	.	ID=RLOC_00008817;geneIDs=comp155210_c3_seq1.path1;transcripts=comp155210_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	69808724	69809346	.	+	.	ID=comp155210_c3_seq1.mrna1;geneID=comp155210_c3_seq1.path1;Name=comp155210_c3_seq1;Dir=indeterminatecoverage=99.8;identity=98.9;matches=616;mismatches=7;indels=0;unknowns=0;Target=comp155210_c3_seq1 623 1 .;CDS_Target=comp155210_c3_seq1 139 2 .;locus=RLOC_00008817
Chr1	stalkie_big_nohaplotig	exon	69808724	69809346	98	+	.	Parent=comp155210_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	69808725	69808862	.	+	0	Parent=comp155210_c3_seq1.mrna1
Chr1	gffcl	locus	69812094	69813756	.	-	.	ID=RLOC_00008818;geneIDs=comp156396_c3_seq1.path1;transcripts=comp156396_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	69812094	69813756	.	-	.	ID=comp156396_c3_seq1.mrna1;geneID=comp156396_c3_seq1.path1;Name=comp156396_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1654;mismatches=9;indels=0;unknowns=0;Target=comp156396_c3_seq1 1663 1 .;CDS_Target=comp156396_c3_seq1 1662 1 .;locus=RLOC_00008818
Chr1	stalkie_big_nohaplotig	exon	69812094	69813756	99	-	.	Parent=comp156396_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	69812095	69813756	.	-	0	Parent=comp156396_c3_seq1.mrna1
Chr1	gffcl	locus	69861053	69864664	.	+	.	ID=RLOC_00008819;geneIDs=comp163151_c0_seq1.path1;transcripts=comp163151_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	69861053	69864664	.	+	.	ID=comp163151_c0_seq1.mrna1;geneID=comp163151_c0_seq1.path1;Name=comp163151_c0_seq1;Dir=indeterminatecoverage=82.3;identity=98.8;matches=3568;mismatches=43;indels=2;unknowns=0;Target=comp163151_c0_seq1 4391 780 .;CDS_Target=comp163151_c0_seq1 2140 1919 .;locus=RLOC_00008819
Chr1	stalkie_big_nohaplotig	exon	69861053	69864664	98	+	.	Parent=comp163151_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	69862191	69862412	.	+	0	Parent=comp163151_c0_seq1.mrna1
Chr1	gffcl	locus	69886668	69887386	.	+	.	ID=RLOC_00008820;geneIDs=comp151793_c0_seq1.path2;transcripts=comp151793_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	69886668	69887386	.	+	.	ID=comp151793_c0_seq1.mrna2;geneID=comp151793_c0_seq1.path2;Name=comp151793_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=441;mismatches=8;indels=0;unknowns=0;Target=comp151793_c0_seq1 324 43 .;locus=RLOC_00008820
Chr1	stalkie_big_nohaplotig	exon	69886668	69887077	98	+	.	Parent=comp151793_c0_seq1.mrna2;Target=comp151793_c0_seq1 410 1 .
Chr1	stalkie_big_nohaplotig	exon	69887348	69887386	97	+	.	Parent=comp151793_c0_seq1.mrna2;Target=comp151793_c0_seq1 449 411 .
Chr1	stalkie_big_nohaplotig	CDS	69886710	69886991	.	+	0	Parent=comp151793_c0_seq1.mrna2
Chr1	gffcl	locus	69907642	69909212	.	-	.	ID=RLOC_00008821;geneIDs=FBgn0027565.1.path1;transcripts=FBgn0027565.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	69907642	69909212	.	-	.	ID=FBgn0027565.1.mrna1;geneID=FBgn0027565.1.path1;Name=FBgn0027565.1;Dir=sensecoverage=100.0;identity=99.6;matches=1401;mismatches=6;indels=0;unknowns=0;locus=RLOC_00008821
Chr1	stalkie_big_nohaplotig	exon	69907642	69908111	99	-	.	Parent=FBgn0027565.1.mrna1;Target=FBgn0027565.1 938 1407 +
Chr1	stalkie_big_nohaplotig	exon	69908176	69908385	100	-	.	Parent=FBgn0027565.1.mrna1;Target=FBgn0027565.1 728 937 +
Chr1	stalkie_big_nohaplotig	exon	69908433	69908646	100	-	.	Parent=FBgn0027565.1.mrna1;Target=FBgn0027565.1 514 727 +
Chr1	stalkie_big_nohaplotig	exon	69908700	69909212	99	-	.	Parent=FBgn0027565.1.mrna1;Target=FBgn0027565.1 1 513 +
Chr1	stalkie_big_nohaplotig	CDS	69907642	69908111	.	-	2	Parent=FBgn0027565.1.mrna1;Target=FBgn0027565.1 938 1407 +
Chr1	stalkie_big_nohaplotig	CDS	69908176	69908385	.	-	2	Parent=FBgn0027565.1.mrna1;Target=FBgn0027565.1 728 937 +
Chr1	stalkie_big_nohaplotig	CDS	69908433	69908646	.	-	0	Parent=FBgn0027565.1.mrna1;Target=FBgn0027565.1 514 727 +
Chr1	stalkie_big_nohaplotig	CDS	69908700	69909212	.	-	0	Parent=FBgn0027565.1.mrna1;Target=FBgn0027565.1 1 513 +
Chr1	gffcl	locus	69928305	69949771	.	+	.	ID=RLOC_00008822;geneIDs=FBgn0011205.1.path1,comp148212_c1_seq1.path1;transcripts=FBgn0011205.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	69928305	69949771	.	+	.	ID=FBgn0011205.1.mrna1;geneID=FBgn0011205.1.path1;Name=FBgn0011205.1;Dir=sensecoverage=100.0;identity=99.9;matches=1582;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008822
Chr1	stalkie_big_nohaplotig	exon	69928305	69928713	100	+	.	Parent=FBgn0011205.1.mrna1;Target=FBgn0011205.1 1 409 +
Chr1	stalkie_big_nohaplotig	exon	69929244	69929422	99	+	.	Parent=FBgn0011205.1.mrna1;Target=FBgn0011205.1 410 588 +
Chr1	stalkie_big_nohaplotig	exon	69938106	69938279	100	+	.	Parent=FBgn0011205.1.mrna1;Target=FBgn0011205.1 589 762 +
Chr1	stalkie_big_nohaplotig	exon	69944901	69945019	100	+	.	Parent=FBgn0011205.1.mrna1;Target=FBgn0011205.1 763 881 +
Chr1	stalkie_big_nohaplotig	exon	69945084	69945209	99	+	.	Parent=FBgn0011205.1.mrna1;Target=FBgn0011205.1 882 1007 +
Chr1	stalkie_big_nohaplotig	exon	69945308	69945484	100	+	.	Parent=FBgn0011205.1.mrna1;Target=FBgn0011205.1 1008 1184 +
Chr1	stalkie_big_nohaplotig	exon	69945534	69945669	100	+	.	Parent=FBgn0011205.1.mrna1;Target=FBgn0011205.1 1185 1320 +
Chr1	stalkie_big_nohaplotig	exon	69949508	69949771	100	+	.	Parent=FBgn0011205.1.mrna1;Target=FBgn0011205.1 1321 1584 +
Chr1	stalkie_big_nohaplotig	CDS	69928305	69928713	.	+	0	Parent=FBgn0011205.1.mrna1;Target=FBgn0011205.1 1 409 +
Chr1	stalkie_big_nohaplotig	CDS	69929244	69929422	.	+	2	Parent=FBgn0011205.1.mrna1;Target=FBgn0011205.1 410 588 +
Chr1	stalkie_big_nohaplotig	CDS	69938106	69938279	.	+	0	Parent=FBgn0011205.1.mrna1;Target=FBgn0011205.1 589 762 +
Chr1	stalkie_big_nohaplotig	CDS	69944901	69945019	.	+	0	Parent=FBgn0011205.1.mrna1;Target=FBgn0011205.1 763 881 +
Chr1	stalkie_big_nohaplotig	CDS	69945084	69945209	.	+	1	Parent=FBgn0011205.1.mrna1;Target=FBgn0011205.1 882 1007 +
Chr1	stalkie_big_nohaplotig	CDS	69945308	69945484	.	+	1	Parent=FBgn0011205.1.mrna1;Target=FBgn0011205.1 1008 1184 +
Chr1	stalkie_big_nohaplotig	CDS	69945534	69945669	.	+	1	Parent=FBgn0011205.1.mrna1;Target=FBgn0011205.1 1185 1320 +
Chr1	stalkie_big_nohaplotig	CDS	69949508	69949771	.	+	0	Parent=FBgn0011205.1.mrna1;Target=FBgn0011205.1 1321 1584 +
Chr1	gffcl	locus	70007573	70008918	.	-	.	ID=RLOC_00008825;geneIDs=FBgn0053969.1.path1;transcripts=FBgn0053969.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70007573	70008918	.	-	.	ID=FBgn0053969.1.mrna1;geneID=FBgn0053969.1.path1;Name=FBgn0053969.1;Dir=sensecoverage=100.0;identity=99.9;matches=1229;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008825
Chr1	stalkie_big_nohaplotig	exon	70007573	70008029	100	-	.	Parent=FBgn0053969.1.mrna1;Target=FBgn0053969.1 774 1230 +
Chr1	stalkie_big_nohaplotig	exon	70008095	70008664	99	-	.	Parent=FBgn0053969.1.mrna1;Target=FBgn0053969.1 204 773 +
Chr1	stalkie_big_nohaplotig	exon	70008716	70008918	100	-	.	Parent=FBgn0053969.1.mrna1;Target=FBgn0053969.1 1 203 +
Chr1	stalkie_big_nohaplotig	CDS	70007573	70008029	.	-	1	Parent=FBgn0053969.1.mrna1;Target=FBgn0053969.1 774 1230 +
Chr1	stalkie_big_nohaplotig	CDS	70008095	70008664	.	-	1	Parent=FBgn0053969.1.mrna1;Target=FBgn0053969.1 204 773 +
Chr1	stalkie_big_nohaplotig	CDS	70008716	70008918	.	-	0	Parent=FBgn0053969.1.mrna1;Target=FBgn0053969.1 1 203 +
Chr1	gffcl	locus	70018926	71770437	.	+	.	ID=RLOC_00008826;geneIDs=comp161840_c3_seq1.path2;transcripts=comp161840_c3_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	70018926	71770437	.	+	.	ID=comp161840_c3_seq1.mrna2;geneID=comp161840_c3_seq1.path2;Name=comp161840_c3_seq1;Dir=indeterminatecoverage=37.5;identity=87.7;matches=507;mismatches=19;indels=52;unknowns=0;locus=RLOC_00008826
Chr1	stalkie_big_nohaplotig	exon	70018926	70018967	100	+	.	Parent=comp161840_c3_seq1.mrna2;Target=comp161840_c3_seq1 925 884 .
Chr1	stalkie_big_nohaplotig	exon	70019025	70019070	95	+	.	Parent=comp161840_c3_seq1.mrna2;Target=comp161840_c3_seq1 981 934 .
Chr1	stalkie_big_nohaplotig	exon	70023513	70023525	92	+	.	Parent=comp161840_c3_seq1.mrna2;Target=comp161840_c3_seq1 994 982 .
Chr1	stalkie_big_nohaplotig	exon	70047463	70047465	100	+	.	Parent=comp161840_c3_seq1.mrna2;Target=comp161840_c3_seq1 997 995 .
Chr1	stalkie_big_nohaplotig	exon	70052163	70052171	100	+	.	Parent=comp161840_c3_seq1.mrna2;Target=comp161840_c3_seq1 1006 998 .
Chr1	stalkie_big_nohaplotig	exon	70053178	70053189	100	+	.	Parent=comp161840_c3_seq1.mrna2;Target=comp161840_c3_seq1 1020 1009 .
Chr1	stalkie_big_nohaplotig	exon	70054165	70054174	100	+	.	Parent=comp161840_c3_seq1.mrna2;Target=comp161840_c3_seq1 1030 1021 .
Chr1	stalkie_big_nohaplotig	exon	70056790	70056795	100	+	.	Parent=comp161840_c3_seq1.mrna2;Target=comp161840_c3_seq1 1038 1033 .
Chr1	stalkie_big_nohaplotig	exon	70079084	70079086	100	+	.	Parent=comp161840_c3_seq1.mrna2;Target=comp161840_c3_seq1 1041 1039 .
Chr1	stalkie_big_nohaplotig	exon	70083188	70083255	36	+	.	Parent=comp161840_c3_seq1.mrna2;Target=comp161840_c3_seq1 1106 1042 .
Chr1	stalkie_big_nohaplotig	exon	70085980	70085986	100	+	.	Parent=comp161840_c3_seq1.mrna2;Target=comp161840_c3_seq1 1113 1107 .
Chr1	stalkie_big_nohaplotig	exon	70091802	70091812	100	+	.	Parent=comp161840_c3_seq1.mrna2;Target=comp161840_c3_seq1 1124 1114 .
Chr1	stalkie_big_nohaplotig	exon	70106927	70106931	100	+	.	Parent=comp161840_c3_seq1.mrna2;Target=comp161840_c3_seq1 1129 1125 .
Chr1	stalkie_big_nohaplotig	exon	70116010	70116019	100	+	.	Parent=comp161840_c3_seq1.mrna2;Target=comp161840_c3_seq1 1139 1130 .
Chr1	stalkie_big_nohaplotig	exon	70139318	70139322	100	+	.	Parent=comp161840_c3_seq1.mrna2;Target=comp161840_c3_seq1 1144 1140 .
Chr1	stalkie_big_nohaplotig	exon	70143016	70143017	100	+	.	Parent=comp161840_c3_seq1.mrna2;Target=comp161840_c3_seq1 1146 1145 .
Chr1	stalkie_big_nohaplotig	exon	70147147	70147148	50	+	.	Parent=comp161840_c3_seq1.mrna2;Target=comp161840_c3_seq1 1148 1147 .
Chr1	stalkie_big_nohaplotig	exon	70153676	70153677	100	+	.	Parent=comp161840_c3_seq1.mrna2;Target=comp161840_c3_seq1 1150 1149 .
Chr1	stalkie_big_nohaplotig	exon	70156934	70156943	100	+	.	Parent=comp161840_c3_seq1.mrna2;Target=comp161840_c3_seq1 1160 1151 .
Chr1	stalkie_big_nohaplotig	exon	71769592	71769622	80	+	.	Parent=comp161840_c3_seq1.mrna2;Target=comp161840_c3_seq1 1185 1161 .
Chr1	stalkie_big_nohaplotig	exon	71770182	71770437	98	+	.	Parent=comp161840_c3_seq1.mrna2;Target=comp161840_c3_seq1 1442 1186 .
Chr1	gffcl	locus	70020129	70044125	.	-	.	ID=RLOC_00008827;geneIDs=FBgn0036978.1.path2,comp161407_c0_seq1.path2;transcripts=comp161407_c0_seq1.mrna2,FBgn0036978.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	70020129	70044125	.	-	.	ID=comp161407_c0_seq1.mrna2;geneID=comp161407_c0_seq1.path2;Name=comp161407_c0_seq1;Dir=sensecoverage=98.0;identity=99.9;matches=3269;mismatches=2;indels=1;unknowns=0;locus=RLOC_00008827
Chr1	stalkie_big_nohaplotig	exon	70020129	70020951	99	-	.	Parent=comp161407_c0_seq1.mrna2;Target=comp161407_c0_seq1 2515 3338 +
Chr1	stalkie_big_nohaplotig	exon	70021019	70022736	99	-	.	Parent=comp161407_c0_seq1.mrna2;Target=comp161407_c0_seq1 797 2514 +
Chr1	stalkie_big_nohaplotig	exon	70033327	70033554	100	-	.	Parent=comp161407_c0_seq1.mrna2;Target=comp161407_c0_seq1 569 796 +
Chr1	stalkie_big_nohaplotig	exon	70043624	70044125	100	-	.	Parent=comp161407_c0_seq1.mrna2;Target=comp161407_c0_seq1 67 568 +
Chr1	stalkie_big_nohaplotig	CDS	70020745	70020951	.	-	0	Parent=comp161407_c0_seq1.mrna2;Target=comp161407_c0_seq1 2515 2721 +
Chr1	stalkie_big_nohaplotig	CDS	70021019	70022736	.	-	2	Parent=comp161407_c0_seq1.mrna2;Target=comp161407_c0_seq1 797 2514 +
Chr1	stalkie_big_nohaplotig	CDS	70033327	70033554	.	-	2	Parent=comp161407_c0_seq1.mrna2;Target=comp161407_c0_seq1 569 796 +
Chr1	stalkie_big_nohaplotig	CDS	70043624	70044125	.	-	0	Parent=comp161407_c0_seq1.mrna2;Target=comp161407_c0_seq1 67 568 +
Chr1	stalkie_big_nohaplotig	mRNA	70020560	70044125	.	-	.	ID=FBgn0036978.1.mrna2;geneID=FBgn0036978.1.path2;Name=FBgn0036978.1;Dir=sensecoverage=97.7;identity=99.9;matches=2788;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008827
Chr1	stalkie_big_nohaplotig	exon	70020560	70020773	100	-	.	Parent=FBgn0036978.1.mrna2;Target=FBgn0036978.1 2643 2856 +
Chr1	stalkie_big_nohaplotig	exon	70020824	70020951	100	-	.	Parent=FBgn0036978.1.mrna2;Target=FBgn0036978.1 2515 2642 +
Chr1	stalkie_big_nohaplotig	exon	70021019	70022736	99	-	.	Parent=FBgn0036978.1.mrna2;Target=FBgn0036978.1 797 2514 +
Chr1	stalkie_big_nohaplotig	exon	70033327	70033554	100	-	.	Parent=FBgn0036978.1.mrna2;Target=FBgn0036978.1 569 796 +
Chr1	stalkie_big_nohaplotig	exon	70043624	70044125	100	-	.	Parent=FBgn0036978.1.mrna2;Target=FBgn0036978.1 67 568 +
Chr1	stalkie_big_nohaplotig	CDS	70020560	70020773	.	-	1	Parent=FBgn0036978.1.mrna2;Target=FBgn0036978.1 2643 2856 +
Chr1	stalkie_big_nohaplotig	CDS	70020824	70020951	.	-	0	Parent=FBgn0036978.1.mrna2;Target=FBgn0036978.1 2515 2642 +
Chr1	stalkie_big_nohaplotig	CDS	70021019	70022736	.	-	2	Parent=FBgn0036978.1.mrna2;Target=FBgn0036978.1 797 2514 +
Chr1	stalkie_big_nohaplotig	CDS	70033327	70033554	.	-	2	Parent=FBgn0036978.1.mrna2;Target=FBgn0036978.1 569 796 +
Chr1	stalkie_big_nohaplotig	CDS	70043624	70044125	.	-	0	Parent=FBgn0036978.1.mrna2;Target=FBgn0036978.1 67 568 +
Chr1	stalkie_big_nohaplotig	mRNA	70101682	70102228	.	+	.	ID=comp189924_c0_seq1.mrna1;geneID=comp189924_c0_seq1.path1;Name=comp189924_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=371;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008829
Chr1	stalkie_big_nohaplotig	exon	70101682	70101704	100	+	.	Parent=comp189924_c0_seq1.mrna1;Target=comp189924_c0_seq1 349 371 -
Chr1	stalkie_big_nohaplotig	exon	70101881	70102228	100	+	.	Parent=comp189924_c0_seq1.mrna1;Target=comp189924_c0_seq1 1 348 -
Chr1	stalkie_big_nohaplotig	CDS	70101683	70101704	.	+	0	Parent=comp189924_c0_seq1.mrna1;Target=comp189924_c0_seq1 349 370 .
Chr1	stalkie_big_nohaplotig	CDS	70101881	70101960	.	+	2	Parent=comp189924_c0_seq1.mrna1;Target=comp189924_c0_seq1 269 348 .
Chr1	gffcl	locus	70102314	70103478	.	-	.	ID=RLOC_00008830;geneIDs=comp154381_c0_seq1.path1;transcripts=comp154381_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70102314	70103478	.	-	.	ID=comp154381_c0_seq1.mrna1;geneID=comp154381_c0_seq1.path1;Name=comp154381_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.7;matches=1162;mismatches=2;indels=1;unknowns=0;Target=comp154381_c0_seq1 1170 7 .;CDS_Target=comp154381_c0_seq1 1152 1024 .;locus=RLOC_00008830
Chr1	stalkie_big_nohaplotig	exon	70102314	70103478	99	-	.	Parent=comp154381_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	70102332	70102460	.	-	0	Parent=comp154381_c0_seq1.mrna1
Chr1	gffcl	locus	70104688	70104994	.	-	.	ID=RLOC_00008831;geneIDs=comp148404_c1_seq1.path1;transcripts=comp148404_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70104688	70104994	.	-	.	ID=comp148404_c1_seq1.mrna1;geneID=comp148404_c1_seq1.path1;Name=comp148404_c1_seq1;Dir=indeterminatecoverage=96.0;identity=97.7;matches=301;mismatches=6;indels=1;unknowns=0;Target=comp148404_c1_seq1 321 14 .;CDS_Target=comp148404_c1_seq1 75 16 .;locus=RLOC_00008831
Chr1	stalkie_big_nohaplotig	exon	70104688	70104994	97	-	.	Parent=comp148404_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	70104933	70104992	.	-	0	Parent=comp148404_c1_seq1.mrna1
Chr1	gffcl	locus	70105110	70105695	.	+	.	ID=RLOC_00008832;geneIDs=comp147670_c0_seq1.path1;transcripts=comp147670_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70105110	70105695	.	+	.	ID=comp147670_c0_seq1.mrna1;geneID=comp147670_c0_seq1.path1;Name=comp147670_c0_seq1;Dir=indeterminatecoverage=99.8;identity=96.6;matches=568;mismatches=17;indels=3;unknowns=0;Target=comp147670_c0_seq1 587 1 .;CDS_Target=comp147670_c0_seq1 466 380 .;locus=RLOC_00008832
Chr1	stalkie_big_nohaplotig	exon	70105110	70105695	96	+	.	Parent=comp147670_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	70105490	70105574	.	+	0	Parent=comp147670_c0_seq1.mrna1
Chr1	gffcl	locus	70105876	70106694	.	+	.	ID=RLOC_00008833;geneIDs=comp150917_c0_seq1.path1;transcripts=comp150917_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70105876	70106694	.	+	.	ID=comp150917_c0_seq1.mrna1;geneID=comp150917_c0_seq1.path1;Name=comp150917_c0_seq1;Dir=indeterminatecoverage=99.5;identity=95.1;matches=804;mismatches=10;indels=31;unknowns=0;Target=comp150917_c0_seq1 844 5 .;CDS_Target=comp150917_c0_seq1 70 5 .;locus=RLOC_00008833
Chr1	stalkie_big_nohaplotig	exon	70105876	70106694	95	+	.	Parent=comp150917_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	70105876	70105942	.	+	0	Parent=comp150917_c0_seq1.mrna1
Chr1	gffcl	locus	70131814	70132406	.	-	.	ID=RLOC_00008835;geneIDs=Dp_FBgn0249362.path2;transcripts=Dp_FBgn0249362.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	70131814	70132406	.	-	.	ID=Dp_FBgn0249362.mrna2;geneID=Dp_FBgn0249362.path2;Name=Dp_FBgn0249362;Dir=indeterminatecoverage=100.0;identity=99.3;matches=590;mismatches=3;indels=1;unknowns=0;Target=Dp_FBgn0249362 594 1 .;locus=RLOC_00008835
Chr1	stalkie_big_nohaplotig	exon	70131814	70132406	99	-	.	Parent=Dp_FBgn0249362.mrna2
Chr1	stalkie_big_nohaplotig	CDS	70131814	70132406	.	-	0	Parent=Dp_FBgn0249362.mrna2
Chr1	gffcl	locus	70235469	70236502	.	+	.	ID=RLOC_00008837;geneIDs=comp163936_c1_seq1.path1;transcripts=comp163936_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70235469	70236502	.	+	.	ID=comp163936_c1_seq1.mrna1;geneID=comp163936_c1_seq1.path1;Name=comp163936_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1031;mismatches=3;indels=0;unknowns=0;Target=comp163936_c1_seq1 1034 1 .;CDS_Target=comp163936_c1_seq1 817 638 .;locus=RLOC_00008837
Chr1	stalkie_big_nohaplotig	exon	70235469	70236502	99	+	.	Parent=comp163936_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	70236106	70236285	.	+	0	Parent=comp163936_c1_seq1.mrna1
Chr1	gffcl	locus	70263678	70297167	.	.	.	ID=RLOC_00008839;geneIDs=FBgn0001247.1.path1,comp133112_c0_seq1.path1;transcripts=FBgn0001247.1.mrna1,comp133112_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70263678	70297167	.	+	.	ID=FBgn0001247.1.mrna1;geneID=FBgn0001247.1.path1;Name=FBgn0001247.1;Dir=sensecoverage=100.0;identity=100.0;matches=3105;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008839
Chr1	stalkie_big_nohaplotig	exon	70263678	70263734	100	+	.	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 1 57 +
Chr1	stalkie_big_nohaplotig	exon	70263785	70263933	100	+	.	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 58 206 +
Chr1	stalkie_big_nohaplotig	exon	70263983	70264117	100	+	.	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 207 341 +
Chr1	stalkie_big_nohaplotig	exon	70264170	70264440	100	+	.	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 342 612 +
Chr1	stalkie_big_nohaplotig	exon	70267180	70267285	100	+	.	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 613 718 +
Chr1	stalkie_big_nohaplotig	exon	70268253	70268375	100	+	.	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 719 841 +
Chr1	stalkie_big_nohaplotig	exon	70268432	70268634	100	+	.	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 842 1044 +
Chr1	stalkie_big_nohaplotig	exon	70268691	70268776	100	+	.	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 1045 1130 +
Chr1	stalkie_big_nohaplotig	exon	70268841	70268955	100	+	.	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 1131 1245 +
Chr1	stalkie_big_nohaplotig	exon	70270651	70270788	100	+	.	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 1246 1383 +
Chr1	stalkie_big_nohaplotig	exon	70270842	70271048	100	+	.	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 1384 1590 +
Chr1	stalkie_big_nohaplotig	exon	70271101	70271451	100	+	.	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 1591 1941 +
Chr1	stalkie_big_nohaplotig	exon	70271522	70271753	100	+	.	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 1942 2173 +
Chr1	stalkie_big_nohaplotig	exon	70271812	70272018	100	+	.	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 2174 2380 +
Chr1	stalkie_big_nohaplotig	exon	70272075	70272232	100	+	.	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 2381 2538 +
Chr1	stalkie_big_nohaplotig	exon	70278313	70278447	100	+	.	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 2539 2673 +
Chr1	stalkie_big_nohaplotig	exon	70296678	70296887	100	+	.	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 2674 2883 +
Chr1	stalkie_big_nohaplotig	exon	70296946	70297167	100	+	.	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 2884 3105 +
Chr1	stalkie_big_nohaplotig	CDS	70263678	70263734	.	+	0	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 1 57 +
Chr1	stalkie_big_nohaplotig	CDS	70263785	70263933	.	+	0	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 58 206 +
Chr1	stalkie_big_nohaplotig	CDS	70263983	70264117	.	+	1	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 207 341 +
Chr1	stalkie_big_nohaplotig	CDS	70264170	70264440	.	+	1	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 342 612 +
Chr1	stalkie_big_nohaplotig	CDS	70267180	70267285	.	+	0	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 613 718 +
Chr1	stalkie_big_nohaplotig	CDS	70268253	70268375	.	+	2	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 719 841 +
Chr1	stalkie_big_nohaplotig	CDS	70268432	70268634	.	+	2	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 842 1044 +
Chr1	stalkie_big_nohaplotig	CDS	70268691	70268776	.	+	0	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 1045 1130 +
Chr1	stalkie_big_nohaplotig	CDS	70268841	70268955	.	+	1	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 1131 1245 +
Chr1	stalkie_big_nohaplotig	CDS	70270651	70270788	.	+	0	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 1246 1383 +
Chr1	stalkie_big_nohaplotig	CDS	70270842	70271048	.	+	0	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 1384 1590 +
Chr1	stalkie_big_nohaplotig	CDS	70271101	70271451	.	+	0	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 1591 1941 +
Chr1	stalkie_big_nohaplotig	CDS	70271522	70271753	.	+	0	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 1942 2173 +
Chr1	stalkie_big_nohaplotig	CDS	70271812	70272018	.	+	2	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 2174 2380 +
Chr1	stalkie_big_nohaplotig	CDS	70272075	70272232	.	+	2	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 2381 2538 +
Chr1	stalkie_big_nohaplotig	CDS	70278313	70278447	.	+	0	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 2539 2673 +
Chr1	stalkie_big_nohaplotig	CDS	70296678	70296887	.	+	0	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 2674 2883 +
Chr1	stalkie_big_nohaplotig	CDS	70296946	70297167	.	+	0	Parent=FBgn0001247.1.mrna1;Target=FBgn0001247.1 2884 3105 +
Chr1	stalkie_big_nohaplotig	mRNA	70270408	70270671	.	-	.	ID=comp133112_c0_seq1.mrna1;geneID=comp133112_c0_seq1.path1;Name=comp133112_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=262;mismatches=2;indels=0;unknowns=0;Target=comp133112_c0_seq1 264 1 .;CDS_Target=comp133112_c0_seq1 183 97 .;locus=RLOC_00008839
Chr1	stalkie_big_nohaplotig	exon	70270408	70270671	99	-	.	Parent=comp133112_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	70270489	70270575	.	-	0	Parent=comp133112_c0_seq1.mrna1
Chr1	gffcl	locus	70297270	70298735	.	-	.	ID=RLOC_00008840;geneIDs=FBgn0036979.1.path1;transcripts=FBgn0036979.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70297270	70298735	.	-	.	ID=FBgn0036979.1.mrna1;geneID=FBgn0036979.1.path1;Name=FBgn0036979.1;Dir=sensecoverage=100.0;identity=100.0;matches=996;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008840
Chr1	stalkie_big_nohaplotig	exon	70297270	70297407	100	-	.	Parent=FBgn0036979.1.mrna1;Target=FBgn0036979.1 859 996 +
Chr1	stalkie_big_nohaplotig	exon	70297465	70297649	100	-	.	Parent=FBgn0036979.1.mrna1;Target=FBgn0036979.1 674 858 +
Chr1	stalkie_big_nohaplotig	exon	70297703	70298080	100	-	.	Parent=FBgn0036979.1.mrna1;Target=FBgn0036979.1 296 673 +
Chr1	stalkie_big_nohaplotig	exon	70298133	70298285	100	-	.	Parent=FBgn0036979.1.mrna1;Target=FBgn0036979.1 143 295 +
Chr1	stalkie_big_nohaplotig	exon	70298594	70298735	100	-	.	Parent=FBgn0036979.1.mrna1;Target=FBgn0036979.1 1 142 +
Chr1	stalkie_big_nohaplotig	CDS	70297270	70297407	.	-	0	Parent=FBgn0036979.1.mrna1;Target=FBgn0036979.1 859 996 +
Chr1	stalkie_big_nohaplotig	CDS	70297465	70297649	.	-	2	Parent=FBgn0036979.1.mrna1;Target=FBgn0036979.1 674 858 +
Chr1	stalkie_big_nohaplotig	CDS	70297703	70298080	.	-	2	Parent=FBgn0036979.1.mrna1;Target=FBgn0036979.1 296 673 +
Chr1	stalkie_big_nohaplotig	CDS	70298133	70298285	.	-	2	Parent=FBgn0036979.1.mrna1;Target=FBgn0036979.1 143 295 +
Chr1	stalkie_big_nohaplotig	CDS	70298594	70298735	.	-	0	Parent=FBgn0036979.1.mrna1;Target=FBgn0036979.1 1 142 +
Chr1	gffcl	locus	70299210	70301765	.	-	.	ID=RLOC_00008841;geneIDs=FBgn0001259.1.path1;transcripts=FBgn0001259.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70299210	70301765	.	-	.	ID=FBgn0001259.1.mrna1;geneID=FBgn0001259.1.path1;Name=FBgn0001259.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2555;mismatches=1;indels=0;unknowns=0;Target=FBgn0001259.1 2556 1 .;locus=RLOC_00008841
Chr1	stalkie_big_nohaplotig	exon	70299210	70301765	99	-	.	Parent=FBgn0001259.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	70299210	70301765	.	-	0	Parent=FBgn0001259.1.mrna1
Chr1	gffcl	locus	70321743	70322760	.	+	.	ID=RLOC_00008842;geneIDs=comp162356_c1_seq1.path5;transcripts=comp162356_c1_seq1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	70321743	70322760	.	+	.	ID=comp162356_c1_seq1.mrna5;geneID=comp162356_c1_seq1.path5;Name=comp162356_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1015;mismatches=3;indels=0;unknowns=0;Target=comp162356_c1_seq1 1018 1 .;CDS_Target=comp162356_c1_seq1 1017 1 .;locus=RLOC_00008842
Chr1	stalkie_big_nohaplotig	exon	70321743	70322760	99	+	.	Parent=comp162356_c1_seq1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	70321743	70322759	.	+	0	Parent=comp162356_c1_seq1.mrna5
Chr1	gffcl	locus	70336095	70343392	.	+	.	ID=RLOC_00008843;geneIDs=comp86559_c0_seq1.path1,comp153591_c1_seq1.path1;transcripts=comp153591_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70336095	70343222	.	+	.	ID=comp153591_c1_seq1.mrna1;geneID=comp153591_c1_seq1.path1;Name=comp153591_c1_seq1;Dir=antisensecoverage=13.6;identity=99.7;matches=634;mismatches=2;indels=0;unknowns=0;Target=comp153591_c1_seq1 429 536 .;locus=RLOC_00008843
Chr1	stalkie_big_nohaplotig	exon	70336095	70336131	100	+	.	Parent=comp153591_c1_seq1.mrna1;Target=comp153591_c1_seq1 600 636 -
Chr1	stalkie_big_nohaplotig	exon	70342624	70343222	99	+	.	Parent=comp153591_c1_seq1.mrna1;Target=comp153591_c1_seq1 1 599 -
Chr1	stalkie_big_nohaplotig	CDS	70342687	70342794	.	+	0	Parent=comp153591_c1_seq1.mrna1
Chr1	gffcl	locus	70341265	70342185	.	+	.	ID=RLOC_00008844;geneIDs=comp143674_c1_seq1.path1;transcripts=comp143674_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70341265	70342185	.	+	.	ID=comp143674_c1_seq1.mrna1;geneID=comp143674_c1_seq1.path1;Name=comp143674_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=921;mismatches=0;indels=0;unknowns=0;Target=comp143674_c1_seq1 921 1 .;CDS_Target=comp143674_c1_seq1 814 665 .;locus=RLOC_00008844
Chr1	stalkie_big_nohaplotig	exon	70341265	70342185	100	+	.	Parent=comp143674_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	70341929	70342078	.	+	0	Parent=comp143674_c1_seq1.mrna1
Chr1	gffcl	locus	70399908	70400179	.	+	.	ID=RLOC_00008845;geneIDs=comp143316_c0_seq1.path2;transcripts=comp143316_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	70399908	70400179	.	+	.	ID=comp143316_c0_seq1.mrna2;geneID=comp143316_c0_seq1.path2;Name=comp143316_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=267;mismatches=5;indels=0;unknowns=0;Target=comp143316_c0_seq1 272 1 .;CDS_Target=comp143316_c0_seq1 95 3 .;locus=RLOC_00008845
Chr1	stalkie_big_nohaplotig	exon	70399908	70400179	98	+	.	Parent=comp143316_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	70399910	70400002	.	+	0	Parent=comp143316_c0_seq1.mrna2
Chr1	gffcl	locus	70421456	70422190	.	+	.	ID=RLOC_00008848;geneIDs=comp149910_c0_seq1.path1;transcripts=comp149910_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70421456	70422190	.	+	.	ID=comp149910_c0_seq1.mrna1;geneID=comp149910_c0_seq1.path1;Name=comp149910_c0_seq1;Dir=sensecoverage=95.5;identity=99.8;matches=503;mismatches=1;indels=0;unknowns=0;Target=comp149910_c0_seq1 26 115 +;locus=RLOC_00008848
Chr1	stalkie_big_nohaplotig	exon	70421456	70421725	100	+	.	Parent=comp149910_c0_seq1.mrna1;Target=comp149910_c0_seq1 25 294 +
Chr1	stalkie_big_nohaplotig	exon	70421957	70422190	99	+	.	Parent=comp149910_c0_seq1.mrna1;Target=comp149910_c0_seq1 295 528 +
Chr1	stalkie_big_nohaplotig	CDS	70421457	70421546	.	+	0	Parent=comp149910_c0_seq1.mrna1
Chr1	gffcl	locus	70432935	70433421	.	+	.	ID=RLOC_00008849;geneIDs=comp150076_c0_seq1.path1;transcripts=comp150076_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70432935	70433421	.	+	.	ID=comp150076_c0_seq1.mrna1;geneID=comp150076_c0_seq1.path1;Name=comp150076_c0_seq1;Dir=indeterminatecoverage=99.4;identity=98.0;matches=478;mismatches=7;indels=3;unknowns=0;Target=comp150076_c0_seq1 489 4 .;CDS_Target=comp150076_c0_seq1 261 160 .;locus=RLOC_00008849
Chr1	stalkie_big_nohaplotig	exon	70432935	70433421	97	+	.	Parent=comp150076_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	70433092	70433193	.	+	0	Parent=comp150076_c0_seq1.mrna1
Chr1	gffcl	locus	70434971	70436091	.	+	.	ID=RLOC_00008850;geneIDs=comp158056_c0_seq1.path1;transcripts=comp158056_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70434971	70436091	.	+	.	ID=comp158056_c0_seq1.mrna1;geneID=comp158056_c0_seq1.path1;Name=comp158056_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=1004;mismatches=0;indels=0;unknowns=0;Target=comp158056_c0_seq1 530 637 .;locus=RLOC_00008850
Chr1	stalkie_big_nohaplotig	exon	70434971	70435047	100	+	.	Parent=comp158056_c0_seq1.mrna1;Target=comp158056_c0_seq1 928 1004 -
Chr1	stalkie_big_nohaplotig	exon	70435105	70435345	100	+	.	Parent=comp158056_c0_seq1.mrna1;Target=comp158056_c0_seq1 687 927 -
Chr1	stalkie_big_nohaplotig	exon	70435406	70436091	100	+	.	Parent=comp158056_c0_seq1.mrna1;Target=comp158056_c0_seq1 1 686 -
Chr1	stalkie_big_nohaplotig	CDS	70435455	70435562	.	+	0	Parent=comp158056_c0_seq1.mrna1
Chr1	gffcl	locus	70438212	70440742	.	+	.	ID=RLOC_00008851;geneIDs=comp157723_c0_seq1.path1;transcripts=comp157723_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70438212	70440742	.	+	.	ID=comp157723_c0_seq1.mrna1;geneID=comp157723_c0_seq1.path1;Name=comp157723_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2529;mismatches=2;indels=1;unknowns=0;Target=comp157723_c0_seq1 2532 1 .;CDS_Target=comp157723_c0_seq1 344 159 .;locus=RLOC_00008851
Chr1	stalkie_big_nohaplotig	exon	70438212	70440742	99	+	.	Parent=comp157723_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	70438370	70438555	.	+	0	Parent=comp157723_c0_seq1.mrna1
Chr1	gffcl	locus	70441189	70441576	.	-	.	ID=RLOC_00008852;geneIDs=comp145774_c0_seq1.path1;transcripts=comp145774_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70441189	70441576	.	-	.	ID=comp145774_c0_seq1.mrna1;geneID=comp145774_c0_seq1.path1;Name=comp145774_c0_seq1;Dir=indeterminatecoverage=96.0;identity=100.0;matches=388;mismatches=0;indels=0;unknowns=0;Target=comp145774_c0_seq1 404 17 .;CDS_Target=comp145774_c0_seq1 169 41 .;locus=RLOC_00008852
Chr1	stalkie_big_nohaplotig	exon	70441189	70441576	100	-	.	Parent=comp145774_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	70441424	70441552	.	-	0	Parent=comp145774_c0_seq1.mrna1
Chr1	gffcl	locus	70493134	70498005	.	-	.	ID=RLOC_00008853;geneIDs=FBgn0260397.1.path1;transcripts=FBgn0260397.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70493134	70498005	.	-	.	ID=FBgn0260397.1.mrna1;geneID=FBgn0260397.1.path1;Name=FBgn0260397.1;Dir=sensecoverage=100.0;identity=100.0;matches=2568;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008853
Chr1	stalkie_big_nohaplotig	exon	70493134	70493717	100	-	.	Parent=FBgn0260397.1.mrna1;Target=FBgn0260397.1 1985 2568 +
Chr1	stalkie_big_nohaplotig	exon	70495859	70496397	100	-	.	Parent=FBgn0260397.1.mrna1;Target=FBgn0260397.1 1446 1984 +
Chr1	stalkie_big_nohaplotig	exon	70496463	70496902	100	-	.	Parent=FBgn0260397.1.mrna1;Target=FBgn0260397.1 1006 1445 +
Chr1	stalkie_big_nohaplotig	exon	70496951	70497742	100	-	.	Parent=FBgn0260397.1.mrna1;Target=FBgn0260397.1 214 1005 +
Chr1	stalkie_big_nohaplotig	exon	70497793	70498005	100	-	.	Parent=FBgn0260397.1.mrna1;Target=FBgn0260397.1 1 213 +
Chr1	stalkie_big_nohaplotig	CDS	70493134	70493717	.	-	2	Parent=FBgn0260397.1.mrna1;Target=FBgn0260397.1 1985 2568 +
Chr1	stalkie_big_nohaplotig	CDS	70495859	70496397	.	-	1	Parent=FBgn0260397.1.mrna1;Target=FBgn0260397.1 1446 1984 +
Chr1	stalkie_big_nohaplotig	CDS	70496463	70496902	.	-	0	Parent=FBgn0260397.1.mrna1;Target=FBgn0260397.1 1006 1445 +
Chr1	stalkie_big_nohaplotig	CDS	70496951	70497742	.	-	0	Parent=FBgn0260397.1.mrna1;Target=FBgn0260397.1 214 1005 +
Chr1	stalkie_big_nohaplotig	CDS	70497793	70498005	.	-	0	Parent=FBgn0260397.1.mrna1;Target=FBgn0260397.1 1 213 +
Chr1	gffcl	locus	70544029	70544393	.	+	.	ID=RLOC_00008854;geneIDs=FBgn0024814.path1;transcripts=FBgn0024814.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70544029	70544393	.	+	.	ID=FBgn0024814.mrna1;geneID=FBgn0024814.path1;Name=FBgn0024814;Dir=indeterminatecoverage=100.0;identity=99.7;matches=365;mismatches=0;indels=1;unknowns=0;Target=FBgn0024814 366 1 .;CDS_Target=FBgn0024814 62 3 .;locus=RLOC_00008854
Chr1	stalkie_big_nohaplotig	exon	70544029	70544393	99	+	.	Parent=FBgn0024814.mrna1
Chr1	stalkie_big_nohaplotig	CDS	70544031	70544089	.	+	0	Parent=FBgn0024814.mrna1
Chr1	gffcl	locus	70593424	70593741	.	+	.	ID=RLOC_00008855;geneIDs=Dp_FBgn0250085.path4;transcripts=Dp_FBgn0250085.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	70593424	70593741	.	+	.	ID=Dp_FBgn0250085.mrna4;geneID=Dp_FBgn0250085.path4;Name=Dp_FBgn0250085;Dir=indeterminatecoverage=100.0;identity=99.7;matches=317;mismatches=1;indels=0;unknowns=0;Target=Dp_FBgn0250085 318 1 .;locus=RLOC_00008855
Chr1	stalkie_big_nohaplotig	exon	70593424	70593741	99	+	.	Parent=Dp_FBgn0250085.mrna4
Chr1	stalkie_big_nohaplotig	CDS	70593424	70593741	.	+	0	Parent=Dp_FBgn0250085.mrna4
Chr1	gffcl	locus	70609457	70610097	.	+	.	ID=RLOC_00008856;geneIDs=comp136205_c0_seq1.path1;transcripts=comp136205_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70609457	70610097	.	+	.	ID=comp136205_c0_seq1.mrna1;geneID=comp136205_c0_seq1.path1;Name=comp136205_c0_seq1;Dir=indeterminatecoverage=59.5;identity=100.0;matches=641;mismatches=0;indels=0;unknowns=0;Target=comp136205_c0_seq1 1078 438 .;CDS_Target=comp136205_c0_seq1 560 438 .;locus=RLOC_00008856
Chr1	stalkie_big_nohaplotig	exon	70609457	70610097	100	+	.	Parent=comp136205_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	70609457	70609579	.	+	0	Parent=comp136205_c0_seq1.mrna1
Chr1	gffcl	locus	70611373	70611617	.	+	.	ID=RLOC_00008857;geneIDs=comp118845_c0_seq1.path1;transcripts=comp118845_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70611373	70611617	.	+	.	ID=comp118845_c0_seq1.mrna1;geneID=comp118845_c0_seq1.path1;Name=comp118845_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=244;mismatches=1;indels=0;unknowns=0;Target=comp118845_c0_seq1 245 1 .;CDS_Target=comp118845_c0_seq1 174 1 .;locus=RLOC_00008857
Chr1	stalkie_big_nohaplotig	exon	70611373	70611617	99	+	.	Parent=comp118845_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	70611373	70611546	.	+	0	Parent=comp118845_c0_seq1.mrna1
Chr1	gffcl	locus	70622983	70623091	.	+	.	ID=RLOC_00008858;geneIDs=comp150740_c1_seq1.path1;transcripts=comp150740_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70622983	70623091	.	+	.	ID=comp150740_c1_seq1.mrna1;geneID=comp150740_c1_seq1.path1;Name=comp150740_c1_seq1;Dir=indeterminatecoverage=12.7;identity=100.0;matches=109;mismatches=0;indels=0;unknowns=0;Target=comp150740_c1_seq1 109 1 .;locus=RLOC_00008858
Chr1	stalkie_big_nohaplotig	exon	70622983	70623091	100	+	.	Parent=comp150740_c1_seq1.mrna1
Chr1	gffcl	locus	70728812	70728884	.	+	.	ID=RLOC_00008860;geneIDs=comp162040_c1_seq1.path2;transcripts=comp162040_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	70728812	70728884	.	+	.	ID=comp162040_c1_seq1.mrna2;geneID=comp162040_c1_seq1.path2;Name=comp162040_c1_seq1;Dir=indeterminatecoverage=3.8;identity=100.0;matches=73;mismatches=0;indels=0;unknowns=0;Target=comp162040_c1_seq1 1913 1841 .;locus=RLOC_00008860
Chr1	stalkie_big_nohaplotig	exon	70728812	70728884	100	+	.	Parent=comp162040_c1_seq1.mrna2
Chr1	gffcl	locus	70844782	70845748	.	+	.	ID=RLOC_00008861;geneIDs=FBgn0036964.1.path1;transcripts=FBgn0036964.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70844782	70845748	.	+	.	ID=FBgn0036964.1.mrna1;geneID=FBgn0036964.1.path1;Name=FBgn0036964.1;Dir=sensecoverage=100.0;identity=100.0;matches=792;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008861
Chr1	stalkie_big_nohaplotig	exon	70844782	70844855	100	+	.	Parent=FBgn0036964.1.mrna1;Target=FBgn0036964.1 1 74 +
Chr1	stalkie_big_nohaplotig	exon	70844928	70845309	100	+	.	Parent=FBgn0036964.1.mrna1;Target=FBgn0036964.1 75 456 +
Chr1	stalkie_big_nohaplotig	exon	70845360	70845550	100	+	.	Parent=FBgn0036964.1.mrna1;Target=FBgn0036964.1 457 647 +
Chr1	stalkie_big_nohaplotig	exon	70845604	70845748	100	+	.	Parent=FBgn0036964.1.mrna1;Target=FBgn0036964.1 648 792 +
Chr1	stalkie_big_nohaplotig	CDS	70844782	70844855	.	+	0	Parent=FBgn0036964.1.mrna1;Target=FBgn0036964.1 1 74 +
Chr1	stalkie_big_nohaplotig	CDS	70844928	70845309	.	+	1	Parent=FBgn0036964.1.mrna1;Target=FBgn0036964.1 75 456 +
Chr1	stalkie_big_nohaplotig	CDS	70845360	70845550	.	+	0	Parent=FBgn0036964.1.mrna1;Target=FBgn0036964.1 457 647 +
Chr1	stalkie_big_nohaplotig	CDS	70845604	70845748	.	+	1	Parent=FBgn0036964.1.mrna1;Target=FBgn0036964.1 648 792 +
Chr1	gffcl	locus	70846318	70846911	.	-	.	ID=RLOC_00008862;geneIDs=FBgn0011305.1.path1;transcripts=FBgn0011305.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70846318	70846911	.	-	.	ID=FBgn0011305.1.mrna1;geneID=FBgn0011305.1.path1;Name=FBgn0011305.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=594;mismatches=0;indels=0;unknowns=0;Target=FBgn0011305.1 594 1 .;locus=RLOC_00008862
Chr1	stalkie_big_nohaplotig	exon	70846318	70846911	100	-	.	Parent=FBgn0011305.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	70846318	70846911	.	-	0	Parent=FBgn0011305.1.mrna1
Chr1	gffcl	locus	70855540	70855751	.	+	.	ID=RLOC_00008863;geneIDs=comp142852_c0_seq1.path1;transcripts=comp142852_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70855540	70855751	.	+	.	ID=comp142852_c0_seq1.mrna1;geneID=comp142852_c0_seq1.path1;Name=comp142852_c0_seq1;Dir=indeterminatecoverage=91.4;identity=100.0;matches=212;mismatches=0;indels=0;unknowns=0;Target=comp142852_c0_seq1 232 21 .;CDS_Target=comp142852_c0_seq1 91 23 .;locus=RLOC_00008863
Chr1	stalkie_big_nohaplotig	exon	70855540	70855751	100	+	.	Parent=comp142852_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	70855542	70855610	.	+	0	Parent=comp142852_c0_seq1.mrna1
Chr1	gffcl	locus	70856438	70859497	.	-	.	ID=RLOC_00008864;geneIDs=FBgn0036494.1.path1;transcripts=FBgn0036494.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70856438	70859497	.	-	.	ID=FBgn0036494.1.mrna1;geneID=FBgn0036494.1.path1;Name=FBgn0036494.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=3053;mismatches=7;indels=0;unknowns=0;Target=FBgn0036494.1 3060 1 .;locus=RLOC_00008864
Chr1	stalkie_big_nohaplotig	exon	70856438	70859497	99	-	.	Parent=FBgn0036494.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	70856438	70859497	.	-	0	Parent=FBgn0036494.1.mrna1
Chr1	gffcl	locus	70862449	70862946	.	+	.	ID=RLOC_00008865;geneIDs=comp153348_c0_seq1.path1;transcripts=comp153348_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70862449	70862946	.	+	.	ID=comp153348_c0_seq1.mrna1;geneID=comp153348_c0_seq1.path1;Name=comp153348_c0_seq1;Dir=indeterminatecoverage=99.4;identity=98.2;matches=498;mismatches=0;indels=9;unknowns=0;Target=comp153348_c0_seq1 510 4 .;CDS_Target=comp153348_c0_seq1 426 331 .;locus=RLOC_00008865
Chr1	stalkie_big_nohaplotig	exon	70862449	70862946	98	+	.	Parent=comp153348_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	70862776	70862862	.	+	0	Parent=comp153348_c0_seq1.mrna1
Chr1	gffcl	locus	70878967	70879413	.	+	.	ID=RLOC_00008868;geneIDs=Dp_FBgn0245412.2.path2;transcripts=Dp_FBgn0245412.2.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	70878967	70879413	.	+	.	ID=Dp_FBgn0245412.2.mrna2;geneID=Dp_FBgn0245412.2.path2;Name=Dp_FBgn0245412.2;Dir=indeterminatecoverage=100.0;identity=99.1;matches=443;mismatches=4;indels=0;unknowns=0;Target=Dp_FBgn0245412.2 447 1 .;locus=RLOC_00008868
Chr1	stalkie_big_nohaplotig	exon	70878967	70879413	99	+	.	Parent=Dp_FBgn0245412.2.mrna2
Chr1	stalkie_big_nohaplotig	CDS	70878967	70879413	.	+	0	Parent=Dp_FBgn0245412.2.mrna2
Chr1	gffcl	locus	70905327	70945040	.	-	.	ID=RLOC_00008869;geneIDs=FBgn0052227.1.path1,comp161615_c0_seq1.path1;transcripts=comp161615_c0_seq1.mrna1,FBgn0052227.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70905327	70945040	.	-	.	ID=comp161615_c0_seq1.mrna1;geneID=comp161615_c0_seq1.path1;Name=comp161615_c0_seq1;Dir=antisensecoverage=97.2;identity=99.7;matches=4371;mismatches=13;indels=1;unknowns=0;locus=RLOC_00008869
Chr1	stalkie_big_nohaplotig	exon	70905327	70906625	99	-	.	Parent=comp161615_c0_seq1.mrna1;Target=comp161615_c0_seq1 1 1299 -
Chr1	stalkie_big_nohaplotig	exon	70906682	70907006	99	-	.	Parent=comp161615_c0_seq1.mrna1;Target=comp161615_c0_seq1 1300 1625 -
Chr1	stalkie_big_nohaplotig	exon	70909652	70909934	100	-	.	Parent=comp161615_c0_seq1.mrna1;Target=comp161615_c0_seq1 1626 1908 -
Chr1	stalkie_big_nohaplotig	exon	70910030	70910179	100	-	.	Parent=comp161615_c0_seq1.mrna1;Target=comp161615_c0_seq1 1909 2058 -
Chr1	stalkie_big_nohaplotig	exon	70910251	70910551	100	-	.	Parent=comp161615_c0_seq1.mrna1;Target=comp161615_c0_seq1 2059 2359 -
Chr1	stalkie_big_nohaplotig	exon	70913060	70913287	99	-	.	Parent=comp161615_c0_seq1.mrna1;Target=comp161615_c0_seq1 2360 2587 -
Chr1	stalkie_big_nohaplotig	exon	70919039	70919169	100	-	.	Parent=comp161615_c0_seq1.mrna1;Target=comp161615_c0_seq1 2588 2718 -
Chr1	stalkie_big_nohaplotig	exon	70932482	70933774	99	-	.	Parent=comp161615_c0_seq1.mrna1;Target=comp161615_c0_seq1 2719 4011 -
Chr1	stalkie_big_nohaplotig	exon	70944608	70944766	98	-	.	Parent=comp161615_c0_seq1.mrna1;Target=comp161615_c0_seq1 4012 4170 -
Chr1	stalkie_big_nohaplotig	exon	70944826	70945040	99	-	.	Parent=comp161615_c0_seq1.mrna1;Target=comp161615_c0_seq1 4171 4385 -
Chr1	stalkie_big_nohaplotig	CDS	70906887	70907006	.	-	1	Parent=comp161615_c0_seq1.mrna1;Target=comp161615_c0_seq1 1505 1625 .
Chr1	stalkie_big_nohaplotig	CDS	70909652	70909934	.	-	2	Parent=comp161615_c0_seq1.mrna1;Target=comp161615_c0_seq1 1626 1908 .
Chr1	stalkie_big_nohaplotig	CDS	70910030	70910179	.	-	2	Parent=comp161615_c0_seq1.mrna1;Target=comp161615_c0_seq1 1909 2058 .
Chr1	stalkie_big_nohaplotig	CDS	70910251	70910551	.	-	0	Parent=comp161615_c0_seq1.mrna1;Target=comp161615_c0_seq1 2059 2359 .
Chr1	stalkie_big_nohaplotig	CDS	70913060	70913287	.	-	0	Parent=comp161615_c0_seq1.mrna1;Target=comp161615_c0_seq1 2360 2587 .
Chr1	stalkie_big_nohaplotig	CDS	70919039	70919169	.	-	2	Parent=comp161615_c0_seq1.mrna1;Target=comp161615_c0_seq1 2588 2718 .
Chr1	stalkie_big_nohaplotig	CDS	70932482	70933742	.	-	0	Parent=comp161615_c0_seq1.mrna1;Target=comp161615_c0_seq1 2719 3979 .
Chr1	stalkie_big_nohaplotig	mRNA	70906889	70933774	.	-	.	ID=FBgn0052227.1.mrna1;geneID=FBgn0052227.1.path1;Name=FBgn0052227.1;Dir=sensecoverage=94.1;identity=99.7;matches=2496;mismatches=8;indels=0;unknowns=0;locus=RLOC_00008869
Chr1	stalkie_big_nohaplotig	exon	70906889	70907006	99	-	.	Parent=FBgn0052227.1.mrna1;Target=FBgn0052227.1 2544 2661 +
Chr1	stalkie_big_nohaplotig	exon	70909652	70909934	100	-	.	Parent=FBgn0052227.1.mrna1;Target=FBgn0052227.1 2261 2543 +
Chr1	stalkie_big_nohaplotig	exon	70910030	70910179	100	-	.	Parent=FBgn0052227.1.mrna1;Target=FBgn0052227.1 2111 2260 +
Chr1	stalkie_big_nohaplotig	exon	70910251	70910551	100	-	.	Parent=FBgn0052227.1.mrna1;Target=FBgn0052227.1 1810 2110 +
Chr1	stalkie_big_nohaplotig	exon	70918605	70918832	99	-	.	Parent=FBgn0052227.1.mrna1;Target=FBgn0052227.1 1582 1809 +
Chr1	stalkie_big_nohaplotig	exon	70919039	70919169	100	-	.	Parent=FBgn0052227.1.mrna1;Target=FBgn0052227.1 1451 1581 +
Chr1	stalkie_big_nohaplotig	exon	70932482	70933774	99	-	.	Parent=FBgn0052227.1.mrna1;Target=FBgn0052227.1 158 1450 +
Chr1	stalkie_big_nohaplotig	CDS	70906889	70907006	.	-	1	Parent=FBgn0052227.1.mrna1;Target=FBgn0052227.1 2544 2661 +
Chr1	stalkie_big_nohaplotig	CDS	70909652	70909934	.	-	2	Parent=FBgn0052227.1.mrna1;Target=FBgn0052227.1 2261 2543 +
Chr1	stalkie_big_nohaplotig	CDS	70910030	70910179	.	-	2	Parent=FBgn0052227.1.mrna1;Target=FBgn0052227.1 2111 2260 +
Chr1	stalkie_big_nohaplotig	CDS	70910251	70910551	.	-	0	Parent=FBgn0052227.1.mrna1;Target=FBgn0052227.1 1810 2110 +
Chr1	stalkie_big_nohaplotig	CDS	70918605	70918832	.	-	0	Parent=FBgn0052227.1.mrna1;Target=FBgn0052227.1 1582 1809 +
Chr1	stalkie_big_nohaplotig	CDS	70919039	70919169	.	-	2	Parent=FBgn0052227.1.mrna1;Target=FBgn0052227.1 1451 1581 +
Chr1	stalkie_big_nohaplotig	CDS	70932482	70933772	.	-	0	Parent=FBgn0052227.1.mrna1;Target=FBgn0052227.1 160 1450 +
Chr1	gffcl	locus	70909063	70909472	.	-	.	ID=RLOC_00008870;geneIDs=comp139071_c2_seq1.path1;transcripts=comp139071_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	70909063	70909472	.	-	.	ID=comp139071_c2_seq1.mrna1;geneID=comp139071_c2_seq1.path1;Name=comp139071_c2_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=410;mismatches=0;indels=0;unknowns=0;Target=comp139071_c2_seq1 410 1 .;CDS_Target=comp139071_c2_seq1 173 60 .;locus=RLOC_00008870
Chr1	stalkie_big_nohaplotig	exon	70909063	70909472	100	-	.	Parent=comp139071_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	70909300	70909413	.	-	0	Parent=comp139071_c2_seq1.mrna1
Chr1	gffcl	locus	70910999	70911770	.	-	.	ID=RLOC_00008871;geneIDs=comp161870_c0_seq1.path8;transcripts=comp161870_c0_seq1.mrna8
Chr1	stalkie_big_nohaplotig	mRNA	70910999	70911770	.	-	.	ID=comp161870_c0_seq1.mrna8;geneID=comp161870_c0_seq1.path8;Name=comp161870_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.5;matches=741;mismatches=10;indels=25;unknowns=0;Target=comp161870_c0_seq1 755 1 .;CDS_Target=comp161870_c0_seq1 316 206 .;locus=RLOC_00008871
Chr1	stalkie_big_nohaplotig	exon	70910999	70911770	95	-	.	Parent=comp161870_c0_seq1.mrna8
Chr1	stalkie_big_nohaplotig	CDS	70911458	70911568	.	-	0	Parent=comp161870_c0_seq1.mrna8
Chr1	gffcl	locus	71029170	71029677	.	+	.	ID=RLOC_00008874;geneIDs=FBgn0031053.1.path2;transcripts=FBgn0031053.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	71029170	71029677	.	+	.	ID=FBgn0031053.1.mrna2;geneID=FBgn0031053.1.path2;Name=FBgn0031053.1;Dir=indeterminatecoverage=38.9;identity=99.8;matches=507;mismatches=1;indels=0;unknowns=0;Target=FBgn0031053.1 1305 798 .;locus=RLOC_00008874
Chr1	stalkie_big_nohaplotig	exon	71029170	71029677	99	+	.	Parent=FBgn0031053.1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	71029170	71029677	.	+	2	Parent=FBgn0031053.1.mrna2
Chr1	gffcl	locus	71077895	71078543	.	+	.	ID=RLOC_00008876;geneIDs=comp151426_c1_seq1.path1;transcripts=comp151426_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71077895	71078543	.	+	.	ID=comp151426_c1_seq1.mrna1;geneID=comp151426_c1_seq1.path1;Name=comp151426_c1_seq1;Dir=indeterminatecoverage=51.1;identity=98.2;matches=637;mismatches=12;indels=0;unknowns=0;Target=comp151426_c1_seq1 649 1 .;CDS_Target=comp151426_c1_seq1 148 2 .;locus=RLOC_00008876
Chr1	stalkie_big_nohaplotig	exon	71077895	71078543	98	+	.	Parent=comp151426_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	71077896	71078042	.	+	0	Parent=comp151426_c1_seq1.mrna1
Chr1	gffcl	locus	71109875	71181174	.	+	.	ID=RLOC_00008877;geneIDs=comp137566_c0_seq1.path2;transcripts=comp137566_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	71109875	71181174	.	+	.	ID=comp137566_c0_seq1.mrna2;geneID=comp137566_c0_seq1.path2;Name=comp137566_c0_seq1;Dir=indeterminatecoverage=89.8;identity=83.4;matches=441;mismatches=63;indels=25;unknowns=0;locus=RLOC_00008877
Chr1	stalkie_big_nohaplotig	exon	71109875	71110025	95	+	.	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 155 1 .
Chr1	stalkie_big_nohaplotig	exon	71130597	71130636	62	+	.	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 193 156 .
Chr1	stalkie_big_nohaplotig	exon	71132952	71133021	57	+	.	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 263 194 .
Chr1	stalkie_big_nohaplotig	exon	71140871	71140873	100	+	.	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 266 264 .
Chr1	stalkie_big_nohaplotig	exon	71145128	71145138	100	+	.	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 277 267 .
Chr1	stalkie_big_nohaplotig	exon	71147989	71148024	63	+	.	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 311 278 .
Chr1	stalkie_big_nohaplotig	exon	71148428	71148433	100	+	.	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 317 312 .
Chr1	stalkie_big_nohaplotig	exon	71150404	71150415	91	+	.	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 329 318 .
Chr1	stalkie_big_nohaplotig	exon	71154408	71154419	91	+	.	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 341 330 .
Chr1	stalkie_big_nohaplotig	exon	71154891	71154893	100	+	.	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 344 342 .
Chr1	stalkie_big_nohaplotig	exon	71155238	71155240	100	+	.	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 347 345 .
Chr1	stalkie_big_nohaplotig	exon	71157773	71157779	100	+	.	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 354 348 .
Chr1	stalkie_big_nohaplotig	exon	71160008	71160015	100	+	.	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 376 369 .
Chr1	stalkie_big_nohaplotig	exon	71163812	71163817	100	+	.	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 388 383 .
Chr1	stalkie_big_nohaplotig	exon	71168511	71168521	100	+	.	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 399 389 .
Chr1	stalkie_big_nohaplotig	exon	71174353	71174386	55	+	.	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 424 400 .
Chr1	stalkie_big_nohaplotig	exon	71175302	71175309	100	+	.	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 432 425 .
Chr1	stalkie_big_nohaplotig	exon	71178089	71178101	100	+	.	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 505 493 .
Chr1	stalkie_big_nohaplotig	exon	71181091	71181174	94	+	.	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 628 547 .
Chr1	stalkie_big_nohaplotig	CDS	71174369	71174386	.	+	0	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 424 412 .
Chr1	stalkie_big_nohaplotig	CDS	71175302	71175309	.	+	0	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 432 425 .
Chr1	stalkie_big_nohaplotig	CDS	71178089	71178101	.	+	1	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 505 493 .
Chr1	stalkie_big_nohaplotig	CDS	71181091	71181150	.	+	0	Parent=comp137566_c0_seq1.mrna2;Target=comp137566_c0_seq1 606 547 .
Chr1	gffcl	locus	71109875	71184238	.	-	.	ID=RLOC_00008878;geneIDs=comp137566_c0_seq1.path1;transcripts=comp137566_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71109875	71184238	.	-	.	ID=comp137566_c0_seq1.mrna1;geneID=comp137566_c0_seq1.path1;Name=comp137566_c0_seq1;Dir=indeterminatecoverage=100.0;identity=84.3;matches=514;mismatches=57;indels=39;unknowns=0;locus=RLOC_00008878
Chr1	stalkie_big_nohaplotig	exon	71109875	71110023	96	-	.	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 699 547 .
Chr1	stalkie_big_nohaplotig	exon	71130592	71130643	65	-	.	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 546 500 .
Chr1	stalkie_big_nohaplotig	exon	71132959	71133028	57	-	.	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 499 430 .
Chr1	stalkie_big_nohaplotig	exon	71145132	71145143	100	-	.	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 429 418 .
Chr1	stalkie_big_nohaplotig	exon	71149422	71149444	82	-	.	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 411 389 .
Chr1	stalkie_big_nohaplotig	exon	71151081	71151084	100	-	.	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 388 385 .
Chr1	stalkie_big_nohaplotig	exon	71153440	71153443	100	-	.	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 384 381 .
Chr1	stalkie_big_nohaplotig	exon	71153735	71153768	62	-	.	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 380 344 .
Chr1	stalkie_big_nohaplotig	exon	71154408	71154418	100	-	.	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 343 333 .
Chr1	stalkie_big_nohaplotig	exon	71160051	71160057	100	-	.	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 332 326 .
Chr1	stalkie_big_nohaplotig	exon	71162521	71162524	100	-	.	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 325 322 .
Chr1	stalkie_big_nohaplotig	exon	71163090	71163102	100	-	.	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 321 309 .
Chr1	stalkie_big_nohaplotig	exon	71164056	71164086	50	-	.	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 308 279 .
Chr1	stalkie_big_nohaplotig	exon	71177342	71177352	90	-	.	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 278 268 .
Chr1	stalkie_big_nohaplotig	exon	71178089	71178101	100	-	.	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 207 195 .
Chr1	stalkie_big_nohaplotig	exon	71184089	71184238	98	-	.	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 150 1 .
Chr1	stalkie_big_nohaplotig	CDS	71133017	71133028	.	-	2	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 443 430 .
Chr1	stalkie_big_nohaplotig	CDS	71145132	71145143	.	-	2	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 429 418 .
Chr1	stalkie_big_nohaplotig	CDS	71149422	71149444	.	-	1	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 411 389 .
Chr1	stalkie_big_nohaplotig	CDS	71151081	71151084	.	-	2	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 388 385 .
Chr1	stalkie_big_nohaplotig	CDS	71153440	71153443	.	-	0	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 384 381 .
Chr1	stalkie_big_nohaplotig	CDS	71153735	71153768	.	-	1	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 380 344 .
Chr1	stalkie_big_nohaplotig	CDS	71154408	71154418	.	-	0	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 343 333 .
Chr1	stalkie_big_nohaplotig	CDS	71160051	71160057	.	-	1	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 332 326 .
Chr1	stalkie_big_nohaplotig	CDS	71162521	71162522	.	-	0	Parent=comp137566_c0_seq1.mrna1;Target=comp137566_c0_seq1 325 324 .
Chr1	gffcl	locus	71126720	71130567	.	-	.	ID=RLOC_00008879;geneIDs=comp163959_c0_seq1.path2;transcripts=comp163959_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	71126720	71130567	.	-	.	ID=comp163959_c0_seq1.mrna2;geneID=comp163959_c0_seq1.path2;Name=comp163959_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=3764;mismatches=58;indels=30;unknowns=0;Target=comp163959_c0_seq1 3826 1 .;CDS_Target=comp163959_c0_seq1 2116 428 .;locus=RLOC_00008879
Chr1	stalkie_big_nohaplotig	exon	71126720	71130567	97	-	.	Parent=comp163959_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	71128430	71130118	.	-	0	Parent=comp163959_c0_seq1.mrna2
Chr1	gffcl	locus	71161729	71162012	.	-	.	ID=RLOC_00008880;geneIDs=comp143281_c0_seq1.path1;transcripts=comp143281_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71161729	71162012	.	-	.	ID=comp143281_c0_seq1.mrna1;geneID=comp143281_c0_seq1.path1;Name=comp143281_c0_seq1;Dir=indeterminatecoverage=93.1;identity=100.0;matches=284;mismatches=0;indels=0;unknowns=0;Target=comp143281_c0_seq1 305 22 .;CDS_Target=comp143281_c0_seq1 58 23 .;locus=RLOC_00008880
Chr1	stalkie_big_nohaplotig	exon	71161729	71162012	100	-	.	Parent=comp143281_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	71161976	71162011	.	-	0	Parent=comp143281_c0_seq1.mrna1
Chr1	gffcl	locus	71181570	71183616	.	+	.	ID=RLOC_00008881;geneIDs=comp161481_c3_seq1.path1;transcripts=comp161481_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71181570	71183616	.	+	.	ID=comp161481_c3_seq1.mrna1;geneID=comp161481_c3_seq1.path1;Name=comp161481_c3_seq1;Dir=indeterminatecoverage=98.5;identity=99.0;matches=2026;mismatches=21;indels=0;unknowns=0;Target=comp161481_c3_seq1 2079 33 .;CDS_Target=comp161481_c3_seq1 1007 636 .;locus=RLOC_00008881
Chr1	stalkie_big_nohaplotig	exon	71181570	71183616	98	+	.	Parent=comp161481_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	71182173	71182544	.	+	0	Parent=comp161481_c3_seq1.mrna1
Chr1	gffcl	locus	71226714	71227724	.	-	.	ID=RLOC_00008883;geneIDs=comp161774_c0_seq1.path2;transcripts=comp161774_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	71226714	71227724	.	-	.	ID=comp161774_c0_seq1.mrna2;geneID=comp161774_c0_seq1.path2;Name=comp161774_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=999;mismatches=8;indels=6;unknowns=0;Target=comp161774_c0_seq1 1009 1 .;CDS_Target=comp161774_c0_seq1 150 40 .;locus=RLOC_00008883
Chr1	stalkie_big_nohaplotig	exon	71226714	71227724	98	-	.	Parent=comp161774_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	71227574	71227685	.	-	0	Parent=comp161774_c0_seq1.mrna2
Chr1	gffcl	locus	71228419	71230685	.	+	.	ID=RLOC_00008884;geneIDs=comp163871_c1_seq1.path1;transcripts=comp163871_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71228419	71230685	.	+	.	ID=comp163871_c1_seq1.mrna1;geneID=comp163871_c1_seq1.path1;Name=comp163871_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=2251;mismatches=16;indels=0;unknowns=0;Target=comp163871_c1_seq1 2267 1 .;CDS_Target=comp163871_c1_seq1 463 263 .;locus=RLOC_00008884
Chr1	stalkie_big_nohaplotig	exon	71228419	71230685	99	+	.	Parent=comp163871_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	71228681	71228881	.	+	0	Parent=comp163871_c1_seq1.mrna1
Chr1	gffcl	locus	71232908	71233660	.	+	.	ID=RLOC_00008885;geneIDs=comp157310_c1_seq1.path4;transcripts=comp157310_c1_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	71232908	71233660	.	+	.	ID=comp157310_c1_seq1.mrna4;geneID=comp157310_c1_seq1.path4;Name=comp157310_c1_seq1;Dir=indeterminatecoverage=100.0;identity=95.8;matches=728;mismatches=18;indels=14;unknowns=0;Target=comp157310_c1_seq1 753 1 .;CDS_Target=comp157310_c1_seq1 88 2 .;locus=RLOC_00008885
Chr1	stalkie_big_nohaplotig	exon	71232908	71233660	95	+	.	Parent=comp157310_c1_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	71232909	71232995	.	+	0	Parent=comp157310_c1_seq1.mrna4
Chr1	gffcl	locus	71254003	71254436	.	+	.	ID=RLOC_00008887;geneIDs=comp153711_c1_seq1.path1;transcripts=comp153711_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71254003	71254436	.	+	.	ID=comp153711_c1_seq1.mrna1;geneID=comp153711_c1_seq1.path1;Name=comp153711_c1_seq1;Dir=indeterminatecoverage=87.9;identity=98.4;matches=427;mismatches=7;indels=0;unknowns=0;Target=comp153711_c1_seq1 434 1 .;CDS_Target=comp153711_c1_seq1 215 3 .;locus=RLOC_00008887
Chr1	stalkie_big_nohaplotig	exon	71254003	71254436	98	+	.	Parent=comp153711_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	71254005	71254217	.	+	0	Parent=comp153711_c1_seq1.mrna1
Chr1	gffcl	locus	71261165	72991011	.	-	.	ID=RLOC_00008888;geneIDs=comp142992_c0_seq1.path1;transcripts=comp142992_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71261165	72991011	.	-	.	ID=comp142992_c0_seq1.mrna1;geneID=comp142992_c0_seq1.path1;Name=comp142992_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.4;matches=243;mismatches=9;indels=0;unknowns=0;locus=RLOC_00008888
Chr1	stalkie_big_nohaplotig	exon	71261165	71261343	100	-	.	Parent=comp142992_c0_seq1.mrna1;Target=comp142992_c0_seq1 252 74 .
Chr1	stalkie_big_nohaplotig	exon	72990939	72991011	87	-	.	Parent=comp142992_c0_seq1.mrna1;Target=comp142992_c0_seq1 73 1 .
Chr1	stalkie_big_nohaplotig	CDS	71261166	71261343	.	-	1	Parent=comp142992_c0_seq1.mrna1;Target=comp142992_c0_seq1 251 74 .
Chr1	stalkie_big_nohaplotig	CDS	72990939	72990946	.	-	0	Parent=comp142992_c0_seq1.mrna1;Target=comp142992_c0_seq1 73 66 .
Chr1	gffcl	locus	71263640	71264418	.	-	.	ID=RLOC_00008889;geneIDs=comp146976_c0_seq1.path1;transcripts=comp146976_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71263640	71264418	.	-	.	ID=comp146976_c0_seq1.mrna1;geneID=comp146976_c0_seq1.path1;Name=comp146976_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=779;mismatches=0;indels=0;unknowns=0;Target=comp146976_c0_seq1 779 1 .;CDS_Target=comp146976_c0_seq1 205 101 .;locus=RLOC_00008889
Chr1	stalkie_big_nohaplotig	exon	71263640	71264418	100	-	.	Parent=comp146976_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	71264214	71264318	.	-	0	Parent=comp146976_c0_seq1.mrna1
Chr1	gffcl	locus	71335884	71540470	.	-	.	ID=RLOC_00008891;geneIDs=comp162217_c0_seq1.path1;transcripts=comp162217_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71335884	71540470	.	-	.	ID=comp162217_c0_seq1.mrna1;geneID=comp162217_c0_seq1.path1;Name=comp162217_c0_seq1;Dir=indeterminatecoverage=96.4;identity=89.3;matches=1076;mismatches=92;indels=37;unknowns=0;Target=comp162217_c0_seq1 520 407 .;locus=RLOC_00008891
Chr1	stalkie_big_nohaplotig	exon	71335884	71336226	96	-	.	Parent=comp162217_c0_seq1.mrna1;Target=comp162217_c0_seq1 1270 929 .
Chr1	stalkie_big_nohaplotig	exon	71342164	71342168	100	-	.	Parent=comp162217_c0_seq1.mrna1;Target=comp162217_c0_seq1 928 924 .
Chr1	stalkie_big_nohaplotig	exon	71349489	71349491	100	-	.	Parent=comp162217_c0_seq1.mrna1;Target=comp162217_c0_seq1 923 921 .
Chr1	stalkie_big_nohaplotig	exon	71355029	71355032	100	-	.	Parent=comp162217_c0_seq1.mrna1;Target=comp162217_c0_seq1 920 917 .
Chr1	stalkie_big_nohaplotig	exon	71362925	71362929	100	-	.	Parent=comp162217_c0_seq1.mrna1;Target=comp162217_c0_seq1 916 912 .
Chr1	stalkie_big_nohaplotig	exon	71419983	71419989	100	-	.	Parent=comp162217_c0_seq1.mrna1;Target=comp162217_c0_seq1 911 905 .
Chr1	stalkie_big_nohaplotig	exon	71440391	71440396	100	-	.	Parent=comp162217_c0_seq1.mrna1;Target=comp162217_c0_seq1 904 899 .
Chr1	stalkie_big_nohaplotig	exon	71464331	71464337	100	-	.	Parent=comp162217_c0_seq1.mrna1;Target=comp162217_c0_seq1 898 892 .
Chr1	stalkie_big_nohaplotig	exon	71467247	71467260	64	-	.	Parent=comp162217_c0_seq1.mrna1;Target=comp162217_c0_seq1 891 883 .
Chr1	stalkie_big_nohaplotig	exon	71472743	71472745	100	-	.	Parent=comp162217_c0_seq1.mrna1;Target=comp162217_c0_seq1 882 880 .
Chr1	stalkie_big_nohaplotig	exon	71479953	71479957	100	-	.	Parent=comp162217_c0_seq1.mrna1;Target=comp162217_c0_seq1 879 875 .
Chr1	stalkie_big_nohaplotig	exon	71487418	71487419	100	-	.	Parent=comp162217_c0_seq1.mrna1;Target=comp162217_c0_seq1 874 873 .
Chr1	stalkie_big_nohaplotig	exon	71492668	71492675	100	-	.	Parent=comp162217_c0_seq1.mrna1;Target=comp162217_c0_seq1 811 804 .
Chr1	stalkie_big_nohaplotig	exon	71500511	71500574	54	-	.	Parent=comp162217_c0_seq1.mrna1;Target=comp162217_c0_seq1 796 731 .
Chr1	stalkie_big_nohaplotig	exon	71508076	71508079	100	-	.	Parent=comp162217_c0_seq1.mrna1;Target=comp162217_c0_seq1 730 727 .
Chr1	stalkie_big_nohaplotig	exon	71539764	71540470	88	-	.	Parent=comp162217_c0_seq1.mrna1;Target=comp162217_c0_seq1 726 21 .
Chr1	stalkie_big_nohaplotig	CDS	71539970	71540093	.	-	0	Parent=comp162217_c0_seq1.mrna1
Chr1	gffcl	locus	71382692	73214719	.	+	.	ID=RLOC_00008892;geneIDs=comp155646_c1_seq1.path1;transcripts=comp155646_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71382692	73214719	.	+	.	ID=comp155646_c1_seq1.mrna1;geneID=comp155646_c1_seq1.path1;Name=comp155646_c1_seq1;Dir=indeterminatecoverage=88.7;identity=97.4;matches=1450;mismatches=38;indels=0;unknowns=0;Target=comp155646_c1_seq1 1302 958 .;locus=RLOC_00008892
Chr1	stalkie_big_nohaplotig	exon	71382692	71383535	100	+	.	Parent=comp155646_c1_seq1.mrna1;Target=comp155646_c1_seq1 844 1 .
Chr1	stalkie_big_nohaplotig	exon	73214076	73214719	94	+	.	Parent=comp155646_c1_seq1.mrna1;Target=comp155646_c1_seq1 1488 845 .
Chr1	stalkie_big_nohaplotig	CDS	73214189	73214533	.	+	0	Parent=comp155646_c1_seq1.mrna1
Chr1	gffcl	locus	71385929	71386591	.	-	.	ID=RLOC_00008893;geneIDs=FBgn0036959.1.path2;transcripts=FBgn0036959.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	71385929	71386591	.	-	.	ID=FBgn0036959.1.mrna2;geneID=FBgn0036959.1.path2;Name=FBgn0036959.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=663;mismatches=0;indels=0;unknowns=0;Target=FBgn0036959.1 663 1 .;locus=RLOC_00008893
Chr1	stalkie_big_nohaplotig	exon	71385929	71386591	100	-	.	Parent=FBgn0036959.1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	71385929	71386591	.	-	0	Parent=FBgn0036959.1.mrna2
Chr1	gffcl	locus	71438218	71439368	.	+	.	ID=RLOC_00008896;geneIDs=FBgn0036967.1.path1;transcripts=FBgn0036967.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71438218	71439368	.	+	.	ID=FBgn0036967.1.mrna1;geneID=FBgn0036967.1.path1;Name=FBgn0036967.1;Dir=sensecoverage=100.0;identity=100.0;matches=720;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008896
Chr1	stalkie_big_nohaplotig	exon	71438218	71438318	100	+	.	Parent=FBgn0036967.1.mrna1;Target=FBgn0036967.1 1 101 +
Chr1	stalkie_big_nohaplotig	exon	71438570	71438661	100	+	.	Parent=FBgn0036967.1.mrna1;Target=FBgn0036967.1 102 193 +
Chr1	stalkie_big_nohaplotig	exon	71438712	71438965	100	+	.	Parent=FBgn0036967.1.mrna1;Target=FBgn0036967.1 194 447 +
Chr1	stalkie_big_nohaplotig	exon	71439041	71439248	100	+	.	Parent=FBgn0036967.1.mrna1;Target=FBgn0036967.1 448 655 +
Chr1	stalkie_big_nohaplotig	exon	71439304	71439368	100	+	.	Parent=FBgn0036967.1.mrna1;Target=FBgn0036967.1 656 720 +
Chr1	stalkie_big_nohaplotig	CDS	71438218	71438318	.	+	0	Parent=FBgn0036967.1.mrna1;Target=FBgn0036967.1 1 101 +
Chr1	stalkie_big_nohaplotig	CDS	71438570	71438661	.	+	1	Parent=FBgn0036967.1.mrna1;Target=FBgn0036967.1 102 193 +
Chr1	stalkie_big_nohaplotig	CDS	71438712	71438965	.	+	2	Parent=FBgn0036967.1.mrna1;Target=FBgn0036967.1 194 447 +
Chr1	stalkie_big_nohaplotig	CDS	71439041	71439248	.	+	0	Parent=FBgn0036967.1.mrna1;Target=FBgn0036967.1 448 655 +
Chr1	stalkie_big_nohaplotig	CDS	71439304	71439368	.	+	2	Parent=FBgn0036967.1.mrna1;Target=FBgn0036967.1 656 720 +
Chr1	gffcl	locus	71472823	71475566	.	+	.	ID=RLOC_00008897;geneIDs=comp163968_c0_seq1.path1;transcripts=comp163968_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71472823	71475566	.	+	.	ID=comp163968_c0_seq1.mrna1;geneID=comp163968_c0_seq1.path1;Name=comp163968_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.9;matches=2636;mismatches=80;indels=61;unknowns=0;Target=comp163968_c0_seq1 2749 1 .;CDS_Target=comp163968_c0_seq1 1868 156 .;locus=RLOC_00008897
Chr1	stalkie_big_nohaplotig	exon	71472823	71475566	94	+	.	Parent=comp163968_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	71472978	71474690	.	+	0	Parent=comp163968_c0_seq1.mrna1
Chr1	gffcl	locus	71492369	71573834	.	+	.	ID=RLOC_00008898;geneIDs=FBgn0052112.1.path1;transcripts=FBgn0052112.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71492369	71573834	.	+	.	ID=FBgn0052112.1.mrna1;geneID=FBgn0052112.1.path1;Name=FBgn0052112.1;Dir=sensecoverage=83.9;identity=100.0;matches=1191;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008898
Chr1	stalkie_big_nohaplotig	exon	71492369	71492636	100	+	.	Parent=FBgn0052112.1.mrna1;Target=FBgn0052112.1 96 363 +
Chr1	stalkie_big_nohaplotig	exon	71504562	71504674	100	+	.	Parent=FBgn0052112.1.mrna1;Target=FBgn0052112.1 364 476 +
Chr1	stalkie_big_nohaplotig	exon	71533210	71533348	100	+	.	Parent=FBgn0052112.1.mrna1;Target=FBgn0052112.1 477 615 +
Chr1	stalkie_big_nohaplotig	exon	71542258	71542347	100	+	.	Parent=FBgn0052112.1.mrna1;Target=FBgn0052112.1 616 705 +
Chr1	stalkie_big_nohaplotig	exon	71567944	71568166	100	+	.	Parent=FBgn0052112.1.mrna1;Target=FBgn0052112.1 706 928 +
Chr1	stalkie_big_nohaplotig	exon	71573477	71573834	100	+	.	Parent=FBgn0052112.1.mrna1;Target=FBgn0052112.1 929 1286 +
Chr1	stalkie_big_nohaplotig	CDS	71492370	71492636	.	+	0	Parent=FBgn0052112.1.mrna1;Target=FBgn0052112.1 97 363 +
Chr1	stalkie_big_nohaplotig	CDS	71504562	71504674	.	+	0	Parent=FBgn0052112.1.mrna1;Target=FBgn0052112.1 364 476 +
Chr1	stalkie_big_nohaplotig	CDS	71533210	71533348	.	+	1	Parent=FBgn0052112.1.mrna1;Target=FBgn0052112.1 477 615 +
Chr1	stalkie_big_nohaplotig	CDS	71542258	71542347	.	+	0	Parent=FBgn0052112.1.mrna1;Target=FBgn0052112.1 616 705 +
Chr1	stalkie_big_nohaplotig	CDS	71567944	71568166	.	+	0	Parent=FBgn0052112.1.mrna1;Target=FBgn0052112.1 706 928 +
Chr1	stalkie_big_nohaplotig	CDS	71573477	71573832	.	+	2	Parent=FBgn0052112.1.mrna1;Target=FBgn0052112.1 929 1284 +
Chr1	gffcl	locus	71574038	71576515	.	-	.	ID=RLOC_00008900;geneIDs=comp158647_c0_seq1.path1;transcripts=comp158647_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71574038	71576515	.	-	.	ID=comp158647_c0_seq1.mrna1;geneID=comp158647_c0_seq1.path1;Name=comp158647_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=2477;mismatches=1;indels=29;unknowns=0;Target=comp158647_c0_seq1 2507 1 .;CDS_Target=comp158647_c0_seq1 1194 1141 .;locus=RLOC_00008900
Chr1	stalkie_big_nohaplotig	exon	71574038	71576515	98	-	.	Parent=comp158647_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	71575336	71575375	.	-	0	Parent=comp158647_c0_seq1.mrna1
Chr1	gffcl	locus	71673563	71675606	.	-	.	ID=RLOC_00008901;geneIDs=comp159706_c0_seq1.path1;transcripts=comp159706_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71673563	71675606	.	-	.	ID=comp159706_c0_seq1.mrna1;geneID=comp159706_c0_seq1.path1;Name=comp159706_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=2040;mismatches=4;indels=0;unknowns=0;Target=comp159706_c0_seq1 2044 1 .;CDS_Target=comp159706_c0_seq1 264 109 .;locus=RLOC_00008901
Chr1	stalkie_big_nohaplotig	exon	71673563	71675606	99	-	.	Parent=comp159706_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	71675343	71675498	.	-	0	Parent=comp159706_c0_seq1.mrna1
Chr1	gffcl	locus	71675898	71676616	.	-	.	ID=RLOC_00008902;geneIDs=comp146522_c1_seq1.path1;transcripts=comp146522_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71675898	71676616	.	-	.	ID=comp146522_c1_seq1.mrna1;geneID=comp146522_c1_seq1.path1;Name=comp146522_c1_seq1;Dir=indeterminatecoverage=93.8;identity=96.4;matches=694;mismatches=25;indels=1;unknowns=0;Target=comp146522_c1_seq1 720 1 .;CDS_Target=comp146522_c1_seq1 335 135 .;locus=RLOC_00008902
Chr1	stalkie_big_nohaplotig	exon	71675898	71676616	96	-	.	Parent=comp146522_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	71676282	71676482	.	-	0	Parent=comp146522_c1_seq1.mrna1
Chr1	gffcl	locus	71679594	71691889	.	+	.	ID=RLOC_00008903;geneIDs=comp153105_c0_seq1.path1;transcripts=comp153105_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71679594	71691889	.	+	.	ID=comp153105_c0_seq1.mrna1;geneID=comp153105_c0_seq1.path1;Name=comp153105_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=1999;mismatches=1;indels=1;unknowns=0;Target=comp153105_c0_seq1 1570 1764 +;locus=RLOC_00008903
Chr1	stalkie_big_nohaplotig	exon	71679594	71679964	100	+	.	Parent=comp153105_c0_seq1.mrna1;Target=comp153105_c0_seq1 2 372 +
Chr1	stalkie_big_nohaplotig	exon	71680110	71681520	99	+	.	Parent=comp153105_c0_seq1.mrna1;Target=comp153105_c0_seq1 373 1784 +
Chr1	stalkie_big_nohaplotig	exon	71691543	71691677	100	+	.	Parent=comp153105_c0_seq1.mrna1;Target=comp153105_c0_seq1 1785 1919 +
Chr1	stalkie_big_nohaplotig	exon	71691807	71691889	98	+	.	Parent=comp153105_c0_seq1.mrna1;Target=comp153105_c0_seq1 1920 2002 +
Chr1	stalkie_big_nohaplotig	CDS	71681306	71681500	.	+	0	Parent=comp153105_c0_seq1.mrna1
Chr1	gffcl	locus	71681881	71696505	.	-	.	ID=RLOC_00008904;geneIDs=FBgn0004396.1.path1;transcripts=FBgn0004396.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71681881	71696505	.	-	.	ID=FBgn0004396.1.mrna1;geneID=FBgn0004396.1.path1;Name=FBgn0004396.1;Dir=sensecoverage=90.5;identity=100.0;matches=1149;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008904
Chr1	stalkie_big_nohaplotig	exon	71681881	71682330	100	-	.	Parent=FBgn0004396.1.mrna1;Target=FBgn0004396.1 820 1269 +
Chr1	stalkie_big_nohaplotig	exon	71682384	71682781	100	-	.	Parent=FBgn0004396.1.mrna1;Target=FBgn0004396.1 422 819 +
Chr1	stalkie_big_nohaplotig	exon	71682842	71682940	100	-	.	Parent=FBgn0004396.1.mrna1;Target=FBgn0004396.1 323 421 +
Chr1	stalkie_big_nohaplotig	exon	71696304	71696505	100	-	.	Parent=FBgn0004396.1.mrna1;Target=FBgn0004396.1 121 322 +
Chr1	stalkie_big_nohaplotig	CDS	71681881	71682330	.	-	0	Parent=FBgn0004396.1.mrna1;Target=FBgn0004396.1 820 1269 +
Chr1	stalkie_big_nohaplotig	CDS	71682384	71682781	.	-	2	Parent=FBgn0004396.1.mrna1;Target=FBgn0004396.1 422 819 +
Chr1	stalkie_big_nohaplotig	CDS	71682842	71682940	.	-	2	Parent=FBgn0004396.1.mrna1;Target=FBgn0004396.1 323 421 +
Chr1	stalkie_big_nohaplotig	CDS	71696304	71696505	.	-	0	Parent=FBgn0004396.1.mrna1;Target=FBgn0004396.1 121 322 +
Chr1	gffcl	locus	71714662	71714979	.	-	.	ID=RLOC_00008905;geneIDs=Dp_FBgn0250085.path10;transcripts=Dp_FBgn0250085.mrna10
Chr1	stalkie_big_nohaplotig	mRNA	71714662	71714979	.	-	.	ID=Dp_FBgn0250085.mrna10;geneID=Dp_FBgn0250085.path10;Name=Dp_FBgn0250085;Dir=indeterminatecoverage=100.0;identity=99.4;matches=316;mismatches=2;indels=0;unknowns=0;Target=Dp_FBgn0250085 318 1 .;locus=RLOC_00008905
Chr1	stalkie_big_nohaplotig	exon	71714662	71714979	99	-	.	Parent=Dp_FBgn0250085.mrna10
Chr1	stalkie_big_nohaplotig	CDS	71714662	71714979	.	-	0	Parent=Dp_FBgn0250085.mrna10
Chr1	gffcl	locus	71777449	72533483	.	-	.	ID=RLOC_00008907;geneIDs=FBgn0036937.1.path1;transcripts=FBgn0036937.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71777449	72533483	.	-	.	ID=FBgn0036937.1.mrna1;geneID=FBgn0036937.1.path1;Name=FBgn0036937.1;Dir=sensecoverage=63.0;identity=97.2;matches=903;mismatches=0;indels=26;unknowns=0;locus=RLOC_00008907
Chr1	stalkie_big_nohaplotig	exon	71777449	71777456	100	-	.	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1333 1340 +
Chr1	stalkie_big_nohaplotig	exon	71781005	71781011	100	-	.	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1326 1332 +
Chr1	stalkie_big_nohaplotig	exon	71795523	71795526	100	-	.	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1322 1325 +
Chr1	stalkie_big_nohaplotig	exon	71795572	71795580	100	-	.	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1254 1262 +
Chr1	stalkie_big_nohaplotig	exon	71797768	71797775	100	-	.	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1246 1253 +
Chr1	stalkie_big_nohaplotig	exon	71809704	71809709	100	-	.	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1240 1245 +
Chr1	stalkie_big_nohaplotig	exon	71815155	71815157	100	-	.	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1237 1239 +
Chr1	stalkie_big_nohaplotig	exon	71815820	71815821	100	-	.	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1235 1236 +
Chr1	stalkie_big_nohaplotig	exon	71822416	71822422	100	-	.	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1228 1234 +
Chr1	stalkie_big_nohaplotig	exon	71822427	71822434	100	-	.	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1170 1177 +
Chr1	stalkie_big_nohaplotig	exon	71830541	71830543	100	-	.	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1167 1169 +
Chr1	stalkie_big_nohaplotig	exon	71832290	71832293	100	-	.	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1163 1166 +
Chr1	stalkie_big_nohaplotig	exon	71838440	71838479	37	-	.	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1148 1162 +
Chr1	stalkie_big_nohaplotig	exon	72519446	72519457	100	-	.	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1123 1134 +
Chr1	stalkie_big_nohaplotig	exon	72526085	72526089	100	-	.	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1118 1122 +
Chr1	stalkie_big_nohaplotig	exon	72528215	72528217	100	-	.	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1115 1117 +
Chr1	stalkie_big_nohaplotig	exon	72531522	72531528	100	-	.	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1108 1114 +
Chr1	stalkie_big_nohaplotig	exon	72532602	72532937	100	-	.	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 772 1107 +
Chr1	stalkie_big_nohaplotig	exon	72533028	72533483	99	-	.	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 317 771 +
Chr1	stalkie_big_nohaplotig	CDS	71777451	71777456	.	-	1	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1333 1338 +
Chr1	stalkie_big_nohaplotig	CDS	71781005	71781011	.	-	2	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1326 1332 +
Chr1	stalkie_big_nohaplotig	CDS	71795523	71795526	.	-	0	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1322 1325 +
Chr1	stalkie_big_nohaplotig	CDS	71795572	71795580	.	-	0	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1254 1262 +
Chr1	stalkie_big_nohaplotig	CDS	71797768	71797775	.	-	2	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1246 1253 +
Chr1	stalkie_big_nohaplotig	CDS	71809704	71809709	.	-	2	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1240 1245 +
Chr1	stalkie_big_nohaplotig	CDS	71815155	71815157	.	-	2	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1237 1239 +
Chr1	stalkie_big_nohaplotig	CDS	71815820	71815821	.	-	1	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1235 1236 +
Chr1	stalkie_big_nohaplotig	CDS	71822416	71822422	.	-	2	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1228 1234 +
Chr1	stalkie_big_nohaplotig	CDS	71822427	71822434	.	-	1	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1170 1177 +
Chr1	stalkie_big_nohaplotig	CDS	71830541	71830543	.	-	1	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1167 1169 +
Chr1	stalkie_big_nohaplotig	CDS	71832290	71832293	.	-	2	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1163 1166 +
Chr1	stalkie_big_nohaplotig	CDS	71838440	71838479	.	-	0	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1148 1162 +
Chr1	stalkie_big_nohaplotig	CDS	72519446	72519457	.	-	0	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1123 1134 +
Chr1	stalkie_big_nohaplotig	CDS	72526085	72526089	.	-	2	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1118 1122 +
Chr1	stalkie_big_nohaplotig	CDS	72528215	72528217	.	-	2	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1115 1117 +
Chr1	stalkie_big_nohaplotig	CDS	72531522	72531528	.	-	0	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 1108 1114 +
Chr1	stalkie_big_nohaplotig	CDS	72532602	72532937	.	-	0	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 772 1107 +
Chr1	stalkie_big_nohaplotig	CDS	72533028	72533450	.	-	0	Parent=FBgn0036937.1.mrna1;Target=FBgn0036937.1 349 771 +
Chr1	gffcl	locus	71940403	71944236	.	-	.	ID=RLOC_00008909;geneIDs=FBgn0029114.1.path1;transcripts=FBgn0029114.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71940403	71944236	.	-	.	ID=FBgn0029114.1.mrna1;geneID=FBgn0029114.1.path1;Name=FBgn0029114.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=3831;mismatches=3;indels=0;unknowns=0;Target=FBgn0029114.1 3834 1 .;locus=RLOC_00008909
Chr1	stalkie_big_nohaplotig	exon	71940403	71944236	99	-	.	Parent=FBgn0029114.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	71940403	71944236	.	-	0	Parent=FBgn0029114.1.mrna1
Chr1	gffcl	locus	71967861	71969111	.	-	.	ID=RLOC_00008910;geneIDs=comp157234_c3_seq1.path1;transcripts=comp157234_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71967861	71969111	.	-	.	ID=comp157234_c3_seq1.mrna1;geneID=comp157234_c3_seq1.path1;Name=comp157234_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1249;mismatches=1;indels=1;unknowns=0;Target=comp157234_c3_seq1 1250 1 .;CDS_Target=comp157234_c3_seq1 183 40 .;locus=RLOC_00008910
Chr1	stalkie_big_nohaplotig	exon	71967861	71969111	99	-	.	Parent=comp157234_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	71968929	71969072	.	-	0	Parent=comp157234_c3_seq1.mrna1
Chr1	gffcl	locus	71969852	71978994	.	-	.	ID=RLOC_00008911;geneIDs=FBgn0036510.2.path1;transcripts=FBgn0036510.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71969852	71978994	.	-	.	ID=FBgn0036510.2.mrna1;geneID=FBgn0036510.2.path1;Name=FBgn0036510.2;Dir=sensecoverage=100.0;identity=100.0;matches=912;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008911
Chr1	stalkie_big_nohaplotig	exon	71969852	71970103	100	-	.	Parent=FBgn0036510.2.mrna1;Target=FBgn0036510.2 661 912 +
Chr1	stalkie_big_nohaplotig	exon	71978179	71978763	100	-	.	Parent=FBgn0036510.2.mrna1;Target=FBgn0036510.2 76 660 +
Chr1	stalkie_big_nohaplotig	exon	71978920	71978994	100	-	.	Parent=FBgn0036510.2.mrna1;Target=FBgn0036510.2 1 75 +
Chr1	stalkie_big_nohaplotig	CDS	71969852	71970103	.	-	0	Parent=FBgn0036510.2.mrna1;Target=FBgn0036510.2 661 912 +
Chr1	stalkie_big_nohaplotig	CDS	71978179	71978763	.	-	0	Parent=FBgn0036510.2.mrna1;Target=FBgn0036510.2 76 660 +
Chr1	stalkie_big_nohaplotig	CDS	71978920	71978994	.	-	0	Parent=FBgn0036510.2.mrna1;Target=FBgn0036510.2 1 75 +
Chr1	gffcl	locus	71972802	71972987	.	+	.	ID=RLOC_00008913;geneIDs=comp163020_c0_seq1.path1;transcripts=comp163020_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	71972802	71972987	.	+	.	ID=comp163020_c0_seq1.mrna1;geneID=comp163020_c0_seq1.path1;Name=comp163020_c0_seq1;Dir=indeterminatecoverage=22.8;identity=97.8;matches=182;mismatches=4;indels=0;unknowns=0;Target=comp163020_c0_seq1 186 1 .;CDS_Target=comp163020_c0_seq1 186 3 .;locus=RLOC_00008913
Chr1	stalkie_big_nohaplotig	exon	71972802	71972987	97	+	.	Parent=comp163020_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	71972804	71972987	.	+	0	Parent=comp163020_c0_seq1.mrna1
Chr1	gffcl	locus	72029592	72029705	.	-	.	ID=RLOC_00008916;geneIDs=FBgn0029944.1.path1;transcripts=FBgn0029944.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72029592	72029705	.	-	.	ID=FBgn0029944.1.mrna1;geneID=FBgn0029944.1.path1;Name=FBgn0029944.1;Dir=indeterminatecoverage=6.8;identity=100.0;matches=114;mismatches=0;indels=0;unknowns=0;Target=FBgn0029944.1 114 1 .;locus=RLOC_00008916
Chr1	stalkie_big_nohaplotig	exon	72029592	72029705	100	-	.	Parent=FBgn0029944.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	72029592	72029705	.	-	0	Parent=FBgn0029944.1.mrna1
Chr1	gffcl	locus	72065556	72070178	.	-	.	ID=RLOC_00008918;geneIDs=comp161421_c14_seq1.path1;transcripts=comp161421_c14_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72065556	72070178	.	-	.	ID=comp161421_c14_seq1.mrna1;geneID=comp161421_c14_seq1.path1;Name=comp161421_c14_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=4598;mismatches=25;indels=1;unknowns=0;Target=comp161421_c14_seq1 4624 1 .;CDS_Target=comp161421_c14_seq1 4607 1623 .;locus=RLOC_00008918
Chr1	stalkie_big_nohaplotig	exon	72065556	72070178	99	-	.	Parent=comp161421_c14_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	72065573	72068557	.	-	0	Parent=comp161421_c14_seq1.mrna1
Chr1	gffcl	locus	72116353	72116948	.	-	.	ID=RLOC_00008920;geneIDs=comp131199_c3_seq1.path1;transcripts=comp131199_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72116353	72116948	.	-	.	ID=comp131199_c3_seq1.mrna1;geneID=comp131199_c3_seq1.path1;Name=comp131199_c3_seq1;Dir=indeterminatecoverage=93.9;identity=99.7;matches=594;mismatches=2;indels=0;unknowns=0;Target=comp131199_c3_seq1 596 1 .;CDS_Target=comp131199_c3_seq1 559 467 .;locus=RLOC_00008920
Chr1	stalkie_big_nohaplotig	exon	72116353	72116948	99	-	.	Parent=comp131199_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	72116390	72116482	.	-	0	Parent=comp131199_c3_seq1.mrna1
Chr1	gffcl	locus	72147183	72148819	.	-	.	ID=RLOC_00008921;geneIDs=ORF585.path2;transcripts=ORF585.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	72147183	72148819	.	-	.	ID=ORF585.mrna2;geneID=ORF585.path2;Name=ORF585;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1627;mismatches=10;indels=1;unknowns=0;Target=ORF585 1638 1 .;locus=RLOC_00008921
Chr1	stalkie_big_nohaplotig	exon	72147183	72148819	99	-	.	Parent=ORF585.mrna2
Chr1	stalkie_big_nohaplotig	CDS	72147183	72148819	.	-	0	Parent=ORF585.mrna2
Chr1	gffcl	locus	72239321	72250635	.	-	.	ID=RLOC_00008923;geneIDs=FBgn0003124.1.path1;transcripts=FBgn0003124.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72239321	72250635	.	-	.	ID=FBgn0003124.1.mrna1;geneID=FBgn0003124.1.path1;Name=FBgn0003124.1;Dir=sensecoverage=99.7;identity=99.9;matches=1556;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008923
Chr1	stalkie_big_nohaplotig	exon	72239321	72239512	99	-	.	Parent=FBgn0003124.1.mrna1;Target=FBgn0003124.1 1372 1563 +
Chr1	stalkie_big_nohaplotig	exon	72239568	72239814	99	-	.	Parent=FBgn0003124.1.mrna1;Target=FBgn0003124.1 1125 1371 +
Chr1	stalkie_big_nohaplotig	exon	72249337	72249518	100	-	.	Parent=FBgn0003124.1.mrna1;Target=FBgn0003124.1 943 1124 +
Chr1	stalkie_big_nohaplotig	exon	72249577	72249961	100	-	.	Parent=FBgn0003124.1.mrna1;Target=FBgn0003124.1 558 942 +
Chr1	stalkie_big_nohaplotig	exon	72250012	72250409	100	-	.	Parent=FBgn0003124.1.mrna1;Target=FBgn0003124.1 160 557 +
Chr1	stalkie_big_nohaplotig	exon	72250482	72250635	100	-	.	Parent=FBgn0003124.1.mrna1;Target=FBgn0003124.1 6 159 +
Chr1	stalkie_big_nohaplotig	CDS	72239321	72239512	.	-	0	Parent=FBgn0003124.1.mrna1;Target=FBgn0003124.1 1372 1563 +
Chr1	stalkie_big_nohaplotig	CDS	72239568	72239814	.	-	1	Parent=FBgn0003124.1.mrna1;Target=FBgn0003124.1 1125 1371 +
Chr1	stalkie_big_nohaplotig	CDS	72249337	72249518	.	-	0	Parent=FBgn0003124.1.mrna1;Target=FBgn0003124.1 943 1124 +
Chr1	stalkie_big_nohaplotig	CDS	72249577	72249961	.	-	1	Parent=FBgn0003124.1.mrna1;Target=FBgn0003124.1 558 942 +
Chr1	stalkie_big_nohaplotig	CDS	72250012	72250409	.	-	0	Parent=FBgn0003124.1.mrna1;Target=FBgn0003124.1 160 557 +
Chr1	stalkie_big_nohaplotig	CDS	72250482	72250634	.	-	0	Parent=FBgn0003124.1.mrna1;Target=FBgn0003124.1 7 159 +
Chr1	gffcl	locus	72239826	72249360	.	+	.	ID=RLOC_00008924;geneIDs=comp154637_c0_seq1.path1;transcripts=comp154637_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72239826	72249360	.	+	.	ID=comp154637_c0_seq1.mrna1;geneID=comp154637_c0_seq1.path1;Name=comp154637_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.7;matches=1537;mismatches=1;indels=19;unknowns=0;Target=comp154637_c0_seq1 1016 849 .;locus=RLOC_00008924
Chr1	stalkie_big_nohaplotig	exon	72239826	72240517	97	+	.	Parent=comp154637_c0_seq1.mrna1;Target=comp154637_c0_seq1 712 4 .
Chr1	stalkie_big_nohaplotig	exon	72240754	72240811	100	+	.	Parent=comp154637_c0_seq1.mrna1;Target=comp154637_c0_seq1 770 713 .
Chr1	stalkie_big_nohaplotig	exon	72240866	72241114	99	+	.	Parent=comp154637_c0_seq1.mrna1;Target=comp154637_c0_seq1 1021 771 .
Chr1	stalkie_big_nohaplotig	exon	72241858	72242372	100	+	.	Parent=comp154637_c0_seq1.mrna1;Target=comp154637_c0_seq1 1536 1022 .
Chr1	stalkie_big_nohaplotig	exon	72249337	72249360	100	+	.	Parent=comp154637_c0_seq1.mrna1;Target=comp154637_c0_seq1 1560 1537 .
Chr1	stalkie_big_nohaplotig	CDS	72240942	72241109	.	+	0	Parent=comp154637_c0_seq1.mrna1
Chr1	gffcl	locus	72247646	72247970	.	-	.	ID=RLOC_00008925;geneIDs=comp116047_c0_seq1.path2;transcripts=comp116047_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	72247646	72247970	.	-	.	ID=comp116047_c0_seq1.mrna2;geneID=comp116047_c0_seq1.path2;Name=comp116047_c0_seq1;Dir=indeterminatecoverage=64.2;identity=100.0;matches=326;mismatches=0;indels=0;unknowns=0;Target=comp116047_c0_seq1 508 184 .;locus=RLOC_00008925
Chr1	stalkie_big_nohaplotig	exon	72247646	72247970	100	-	.	Parent=comp116047_c0_seq1.mrna2
Chr1	gffcl	locus	72301192	72366971	.	+	.	ID=RLOC_00008926;geneIDs=comp145369_c1_seq1.path1;transcripts=comp145369_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72301192	72366971	.	+	.	ID=comp145369_c1_seq1.mrna1;geneID=comp145369_c1_seq1.path1;Name=comp145369_c1_seq1;Dir=sensecoverage=90.0;identity=98.5;matches=805;mismatches=9;indels=3;unknowns=0;locus=RLOC_00008926
Chr1	stalkie_big_nohaplotig	exon	72301192	72301367	100	+	.	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 2 177 +
Chr1	stalkie_big_nohaplotig	exon	72315210	72315743	99	+	.	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 178 711 +
Chr1	stalkie_big_nohaplotig	exon	72315971	72315978	100	+	.	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 712 719 +
Chr1	stalkie_big_nohaplotig	exon	72315986	72315994	88	+	.	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 771 779 +
Chr1	stalkie_big_nohaplotig	exon	72318128	72318131	75	+	.	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 780 783 +
Chr1	stalkie_big_nohaplotig	exon	72328334	72328342	100	+	.	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 784 792 +
Chr1	stalkie_big_nohaplotig	exon	72335155	72335163	88	+	.	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 793 801 +
Chr1	stalkie_big_nohaplotig	exon	72343082	72343085	100	+	.	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 802 805 +
Chr1	stalkie_big_nohaplotig	exon	72345609	72345617	77	+	.	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 806 814 +
Chr1	stalkie_big_nohaplotig	exon	72345896	72345901	100	+	.	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 815 820 +
Chr1	stalkie_big_nohaplotig	exon	72347311	72347315	100	+	.	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 821 825 +
Chr1	stalkie_big_nohaplotig	exon	72348060	72348067	100	+	.	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 826 833 +
Chr1	stalkie_big_nohaplotig	exon	72348877	72348881	100	+	.	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 834 838 +
Chr1	stalkie_big_nohaplotig	exon	72353026	72353029	100	+	.	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 844 847 +
Chr1	stalkie_big_nohaplotig	exon	72365946	72365949	100	+	.	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 848 851 +
Chr1	stalkie_big_nohaplotig	exon	72366949	72366971	82	+	.	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 852 871 +
Chr1	stalkie_big_nohaplotig	CDS	72315652	72315743	.	+	0	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 620 711 +
Chr1	stalkie_big_nohaplotig	CDS	72315971	72315978	.	+	1	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 712 719 +
Chr1	stalkie_big_nohaplotig	CDS	72315986	72315994	.	+	2	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 771 779 +
Chr1	stalkie_big_nohaplotig	CDS	72318128	72318131	.	+	2	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 780 783 +
Chr1	stalkie_big_nohaplotig	CDS	72328334	72328342	.	+	1	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 784 792 +
Chr1	stalkie_big_nohaplotig	CDS	72335155	72335163	.	+	1	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 793 801 +
Chr1	stalkie_big_nohaplotig	CDS	72343082	72343085	.	+	1	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 802 805 +
Chr1	stalkie_big_nohaplotig	CDS	72345609	72345617	.	+	0	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 806 814 +
Chr1	stalkie_big_nohaplotig	CDS	72345896	72345901	.	+	0	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 815 820 +
Chr1	stalkie_big_nohaplotig	CDS	72347311	72347315	.	+	0	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 821 825 +
Chr1	stalkie_big_nohaplotig	CDS	72348060	72348067	.	+	1	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 826 833 +
Chr1	stalkie_big_nohaplotig	CDS	72348877	72348881	.	+	2	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 834 838 +
Chr1	stalkie_big_nohaplotig	CDS	72353026	72353029	.	+	0	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 844 847 +
Chr1	stalkie_big_nohaplotig	CDS	72365946	72365949	.	+	2	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 848 851 +
Chr1	stalkie_big_nohaplotig	CDS	72366949	72366971	.	+	1	Parent=comp145369_c1_seq1.mrna1;Target=comp145369_c1_seq1 852 871 +
Chr1	gffcl	locus	72307481	72308388	.	-	.	ID=RLOC_00008927;geneIDs=FBgn0262534.1.path5;transcripts=FBgn0262534.1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	72307481	72308388	.	-	.	ID=FBgn0262534.1.mrna5;geneID=FBgn0262534.1.path5;Name=FBgn0262534.1;Dir=sensecoverage=98.6;identity=98.5;matches=787;mismatches=11;indels=1;unknowns=0;locus=RLOC_00008927
Chr1	stalkie_big_nohaplotig	exon	72307481	72307654	98	-	.	Parent=FBgn0262534.1.mrna5;Target=FBgn0262534.1 626 799 +
Chr1	stalkie_big_nohaplotig	exon	72307708	72307923	99	-	.	Parent=FBgn0262534.1.mrna5;Target=FBgn0262534.1 410 625 +
Chr1	stalkie_big_nohaplotig	exon	72307981	72308388	97	-	.	Parent=FBgn0262534.1.mrna5;Target=FBgn0262534.1 1 409 +
Chr1	stalkie_big_nohaplotig	CDS	72307482	72307654	.	-	0	Parent=FBgn0262534.1.mrna5;Target=FBgn0262534.1 626 798 +
Chr1	stalkie_big_nohaplotig	CDS	72307708	72307923	.	-	0	Parent=FBgn0262534.1.mrna5;Target=FBgn0262534.1 410 625 +
Chr1	stalkie_big_nohaplotig	CDS	72307981	72308388	.	-	0	Parent=FBgn0262534.1.mrna5;Target=FBgn0262534.1 1 409 +
Chr1	gffcl	locus	72360062	72360183	.	+	.	ID=RLOC_00008928;geneIDs=FBgn0040823.1.path2;transcripts=FBgn0040823.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	72360062	72360183	.	+	.	ID=FBgn0040823.1.mrna2;geneID=FBgn0040823.1.path2;Name=FBgn0040823.1;Dir=indeterminatecoverage=11.9;identity=100.0;matches=122;mismatches=0;indels=0;unknowns=0;Target=FBgn0040823.1 1023 902 .;locus=RLOC_00008928
Chr1	stalkie_big_nohaplotig	exon	72360062	72360183	100	+	.	Parent=FBgn0040823.1.mrna2
Chr1	gffcl	locus	72362886	72363853	.	+	.	ID=RLOC_00008929;geneIDs=comp151499_c0_seq1.path1;transcripts=comp151499_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72362886	72363853	.	+	.	ID=comp151499_c0_seq1.mrna1;geneID=comp151499_c0_seq1.path1;Name=comp151499_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.6;matches=938;mismatches=30;indels=13;unknowns=0;Target=comp151499_c0_seq1 981 1 .;CDS_Target=comp151499_c0_seq1 265 2 .;locus=RLOC_00008929
Chr1	stalkie_big_nohaplotig	exon	72362886	72363853	95	+	.	Parent=comp151499_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	72362887	72363146	.	+	0	Parent=comp151499_c0_seq1.mrna1
Chr1	gffcl	locus	72365370	72365906	.	.	.	ID=RLOC_00008930;geneIDs=comp147643_c0_seq1.path1,comp152659_c0_seq1.path1;transcripts=comp152659_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72365537	72365906	.	-	.	ID=comp152659_c0_seq1.mrna1;geneID=comp152659_c0_seq1.path1;Name=comp152659_c0_seq1;Dir=indeterminatecoverage=100.0;identity=83.8;matches=341;mismatches=16;indels=50;unknowns=0;Target=comp152659_c0_seq1 394 1 .;CDS_Target=comp152659_c0_seq1 164 96 .;locus=RLOC_00008930
Chr1	stalkie_big_nohaplotig	exon	72365537	72365906	83	-	.	Parent=comp152659_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	72365730	72365811	.	-	0	Parent=comp152659_c0_seq1.mrna1
Chr1	gffcl	locus	72387155	74365265	.	+	.	ID=RLOC_00008931;geneIDs=comp162418_c3_seq1.path1;transcripts=comp162418_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72387155	74365265	.	+	.	ID=comp162418_c3_seq1.mrna1;geneID=comp162418_c3_seq1.path1;Name=comp162418_c3_seq1;Dir=antisensecoverage=70.3;identity=98.2;matches=1340;mismatches=22;indels=3;unknowns=0;Target=comp162418_c3_seq1 809 961 .;locus=RLOC_00008931
Chr1	stalkie_big_nohaplotig	exon	72387155	72387173	100	+	.	Parent=comp162418_c3_seq1.mrna1;Target=comp162418_c3_seq1 1397 1415 -
Chr1	stalkie_big_nohaplotig	exon	72397465	72397470	100	+	.	Parent=comp162418_c3_seq1.mrna1;Target=comp162418_c3_seq1 1380 1385 -
Chr1	stalkie_big_nohaplotig	exon	72407034	72407045	83	+	.	Parent=comp162418_c3_seq1.mrna1;Target=comp162418_c3_seq1 1368 1379 -
Chr1	stalkie_big_nohaplotig	exon	72412722	72412723	100	+	.	Parent=comp162418_c3_seq1.mrna1;Target=comp162418_c3_seq1 1321 1322 -
Chr1	stalkie_big_nohaplotig	exon	74362228	74363407	98	+	.	Parent=comp162418_c3_seq1.mrna1;Target=comp162418_c3_seq1 144 1320 -
Chr1	stalkie_big_nohaplotig	exon	74365123	74365265	100	+	.	Parent=comp162418_c3_seq1.mrna1;Target=comp162418_c3_seq1 1 143 -
Chr1	stalkie_big_nohaplotig	CDS	74362590	74362742	.	+	0	Parent=comp162418_c3_seq1.mrna1
Chr1	gffcl	locus	72533692	72535275	.	+	.	ID=RLOC_00008932;geneIDs=comp138396_c1_seq1.path1;transcripts=comp138396_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72533692	72535275	.	+	.	ID=comp138396_c1_seq1.mrna1;geneID=comp138396_c1_seq1.path1;Name=comp138396_c1_seq1;Dir=indeterminatecoverage=100.0;identity=95.2;matches=1555;mismatches=28;indels=50;unknowns=0;Target=comp138396_c1_seq1 1632 1 .;CDS_Target=comp138396_c1_seq1 1337 1161 .;locus=RLOC_00008932
Chr1	stalkie_big_nohaplotig	exon	72533692	72535275	95	+	.	Parent=comp138396_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	72534840	72535011	.	+	0	Parent=comp138396_c1_seq1.mrna1
Chr1	gffcl	locus	72599714	72602051	.	+	.	ID=RLOC_00008933;geneIDs=comp135362_c0_seq1.path1;transcripts=comp135362_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72599714	72602051	.	+	.	ID=comp135362_c0_seq1.mrna1;geneID=comp135362_c0_seq1.path1;Name=comp135362_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=2282;mismatches=3;indels=0;unknowns=0;locus=RLOC_00008933
Chr1	stalkie_big_nohaplotig	exon	72599714	72600025	100	+	.	Parent=comp135362_c0_seq1.mrna1;Target=comp135362_c0_seq1 1 312 +
Chr1	stalkie_big_nohaplotig	exon	72600079	72602051	99	+	.	Parent=comp135362_c0_seq1.mrna1;Target=comp135362_c0_seq1 313 2285 +
Chr1	stalkie_big_nohaplotig	CDS	72599853	72600025	.	+	0	Parent=comp135362_c0_seq1.mrna1;Target=comp135362_c0_seq1 140 312 +
Chr1	stalkie_big_nohaplotig	CDS	72600079	72600553	.	+	1	Parent=comp135362_c0_seq1.mrna1;Target=comp135362_c0_seq1 313 787 +
Chr1	gffcl	locus	72656696	72658232	.	+	.	ID=RLOC_00008934;geneIDs=FBgn0261109.1.path1;transcripts=FBgn0261109.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72656696	72658232	.	+	.	ID=FBgn0261109.1.mrna1;geneID=FBgn0261109.1.path1;Name=FBgn0261109.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1488;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008934
Chr1	stalkie_big_nohaplotig	exon	72656696	72656994	100	+	.	Parent=FBgn0261109.1.mrna1;Target=FBgn0261109.1 299 1 .
Chr1	stalkie_big_nohaplotig	exon	72657044	72658232	100	+	.	Parent=FBgn0261109.1.mrna1;Target=FBgn0261109.1 1488 300 .
Chr1	stalkie_big_nohaplotig	CDS	72656696	72656994	.	+	0	Parent=FBgn0261109.1.mrna1;Target=FBgn0261109.1 299 1 .
Chr1	stalkie_big_nohaplotig	CDS	72657044	72658232	.	+	1	Parent=FBgn0261109.1.mrna1;Target=FBgn0261109.1 1488 300 .
Chr1	gffcl	locus	72658344	72660336	.	-	.	ID=RLOC_00008935;geneIDs=FBgn0036512.1.path1;transcripts=FBgn0036512.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72658344	72660336	.	-	.	ID=FBgn0036512.1.mrna1;geneID=FBgn0036512.1.path1;Name=FBgn0036512.1;Dir=sensecoverage=100.0;identity=99.9;matches=1835;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008935
Chr1	stalkie_big_nohaplotig	exon	72658344	72659132	100	-	.	Parent=FBgn0036512.1.mrna1;Target=FBgn0036512.1 1048 1836 +
Chr1	stalkie_big_nohaplotig	exon	72659184	72659741	100	-	.	Parent=FBgn0036512.1.mrna1;Target=FBgn0036512.1 490 1047 +
Chr1	stalkie_big_nohaplotig	exon	72659799	72660215	100	-	.	Parent=FBgn0036512.1.mrna1;Target=FBgn0036512.1 73 489 +
Chr1	stalkie_big_nohaplotig	exon	72660265	72660336	98	-	.	Parent=FBgn0036512.1.mrna1;Target=FBgn0036512.1 1 72 +
Chr1	stalkie_big_nohaplotig	CDS	72658344	72659132	.	-	0	Parent=FBgn0036512.1.mrna1;Target=FBgn0036512.1 1048 1836 +
Chr1	stalkie_big_nohaplotig	CDS	72659184	72659741	.	-	0	Parent=FBgn0036512.1.mrna1;Target=FBgn0036512.1 490 1047 +
Chr1	stalkie_big_nohaplotig	CDS	72659799	72660215	.	-	0	Parent=FBgn0036512.1.mrna1;Target=FBgn0036512.1 73 489 +
Chr1	stalkie_big_nohaplotig	CDS	72660265	72660336	.	-	0	Parent=FBgn0036512.1.mrna1;Target=FBgn0036512.1 1 72 +
Chr1	gffcl	locus	72696288	72697192	.	+	.	ID=RLOC_00008936;geneIDs=comp144208_c1_seq1.path1;transcripts=comp144208_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72696288	72697192	.	+	.	ID=comp144208_c1_seq1.mrna1;geneID=comp144208_c1_seq1.path1;Name=comp144208_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=904;mismatches=1;indels=0;unknowns=0;Target=comp144208_c1_seq1 905 1 .;CDS_Target=comp144208_c1_seq1 711 421 .;locus=RLOC_00008936
Chr1	stalkie_big_nohaplotig	exon	72696288	72697192	99	+	.	Parent=comp144208_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	72696708	72696998	.	+	0	Parent=comp144208_c1_seq1.mrna1
Chr1	gffcl	locus	72714384	72715066	.	-	.	ID=RLOC_00008937;geneIDs=comp146326_c0_seq1.path1;transcripts=comp146326_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72714384	72715066	.	-	.	ID=comp146326_c0_seq1.mrna1;geneID=comp146326_c0_seq1.path1;Name=comp146326_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=681;mismatches=2;indels=0;unknowns=0;Target=comp146326_c0_seq1 683 1 .;CDS_Target=comp146326_c0_seq1 367 191 .;locus=RLOC_00008937
Chr1	stalkie_big_nohaplotig	exon	72714384	72715066	99	-	.	Parent=comp146326_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	72714700	72714876	.	-	0	Parent=comp146326_c0_seq1.mrna1
Chr1	gffcl	locus	72722355	72724527	.	+	.	ID=RLOC_00008938;geneIDs=comp157117_c0_seq1.path1;transcripts=comp157117_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72722355	72724527	.	+	.	ID=comp157117_c0_seq1.mrna1;geneID=comp157117_c0_seq1.path1;Name=comp157117_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=2163;mismatches=10;indels=7;unknowns=0;Target=comp157117_c0_seq1 2180 1 .;CDS_Target=comp157117_c0_seq1 1232 1107 .;locus=RLOC_00008938
Chr1	stalkie_big_nohaplotig	exon	72722355	72724527	99	+	.	Parent=comp157117_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	72723461	72723586	.	+	0	Parent=comp157117_c0_seq1.mrna1
Chr1	gffcl	locus	72745681	72746724	.	-	.	ID=RLOC_00008939;geneIDs=FBgn0036516.1.path1;transcripts=FBgn0036516.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72745681	72746724	.	-	.	ID=FBgn0036516.1.mrna1;geneID=FBgn0036516.1.path1;Name=FBgn0036516.1;Dir=sensecoverage=100.0;identity=100.0;matches=816;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008939
Chr1	stalkie_big_nohaplotig	exon	72745681	72745953	100	-	.	Parent=FBgn0036516.1.mrna1;Target=FBgn0036516.1 544 816 +
Chr1	stalkie_big_nohaplotig	exon	72746004	72746494	100	-	.	Parent=FBgn0036516.1.mrna1;Target=FBgn0036516.1 53 543 +
Chr1	stalkie_big_nohaplotig	exon	72746673	72746724	100	-	.	Parent=FBgn0036516.1.mrna1;Target=FBgn0036516.1 1 52 +
Chr1	stalkie_big_nohaplotig	CDS	72745681	72745953	.	-	0	Parent=FBgn0036516.1.mrna1;Target=FBgn0036516.1 544 816 +
Chr1	stalkie_big_nohaplotig	CDS	72746004	72746494	.	-	2	Parent=FBgn0036516.1.mrna1;Target=FBgn0036516.1 53 543 +
Chr1	stalkie_big_nohaplotig	CDS	72746673	72746724	.	-	0	Parent=FBgn0036516.1.mrna1;Target=FBgn0036516.1 1 52 +
Chr1	gffcl	locus	72753094	72757440	.	+	.	ID=RLOC_00008940;geneIDs=FBgn0041161.1.path1;transcripts=FBgn0041161.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72753094	72757440	.	+	.	ID=FBgn0041161.1.mrna1;geneID=FBgn0041161.1.path1;Name=FBgn0041161.1;Dir=sensecoverage=100.0;identity=100.0;matches=3950;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008940
Chr1	stalkie_big_nohaplotig	exon	72753094	72753312	100	+	.	Parent=FBgn0041161.1.mrna1;Target=FBgn0041161.1 1 219 +
Chr1	stalkie_big_nohaplotig	exon	72753369	72753725	100	+	.	Parent=FBgn0041161.1.mrna1;Target=FBgn0041161.1 220 576 +
Chr1	stalkie_big_nohaplotig	exon	72753834	72754389	100	+	.	Parent=FBgn0041161.1.mrna1;Target=FBgn0041161.1 577 1132 +
Chr1	stalkie_big_nohaplotig	exon	72754443	72756385	99	+	.	Parent=FBgn0041161.1.mrna1;Target=FBgn0041161.1 1133 3075 +
Chr1	stalkie_big_nohaplotig	exon	72756446	72756760	100	+	.	Parent=FBgn0041161.1.mrna1;Target=FBgn0041161.1 3076 3390 +
Chr1	stalkie_big_nohaplotig	exon	72756826	72757072	100	+	.	Parent=FBgn0041161.1.mrna1;Target=FBgn0041161.1 3391 3637 +
Chr1	stalkie_big_nohaplotig	exon	72757127	72757440	100	+	.	Parent=FBgn0041161.1.mrna1;Target=FBgn0041161.1 3638 3951 +
Chr1	stalkie_big_nohaplotig	CDS	72753094	72753312	.	+	0	Parent=FBgn0041161.1.mrna1;Target=FBgn0041161.1 1 219 +
Chr1	stalkie_big_nohaplotig	CDS	72753369	72753725	.	+	0	Parent=FBgn0041161.1.mrna1;Target=FBgn0041161.1 220 576 +
Chr1	stalkie_big_nohaplotig	CDS	72753834	72754389	.	+	0	Parent=FBgn0041161.1.mrna1;Target=FBgn0041161.1 577 1132 +
Chr1	stalkie_big_nohaplotig	CDS	72754443	72756385	.	+	2	Parent=FBgn0041161.1.mrna1;Target=FBgn0041161.1 1133 3075 +
Chr1	stalkie_big_nohaplotig	CDS	72756446	72756760	.	+	0	Parent=FBgn0041161.1.mrna1;Target=FBgn0041161.1 3076 3390 +
Chr1	stalkie_big_nohaplotig	CDS	72756826	72757072	.	+	0	Parent=FBgn0041161.1.mrna1;Target=FBgn0041161.1 3391 3637 +
Chr1	stalkie_big_nohaplotig	CDS	72757127	72757440	.	+	2	Parent=FBgn0041161.1.mrna1;Target=FBgn0041161.1 3638 3951 +
Chr1	gffcl	locus	72772898	72773233	.	-	.	ID=RLOC_00008941;geneIDs=comp160253_c1_seq1.path1;transcripts=comp160253_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72772898	72773233	.	-	.	ID=comp160253_c1_seq1.mrna1;geneID=comp160253_c1_seq1.path1;Name=comp160253_c1_seq1;Dir=indeterminatecoverage=82.2;identity=99.4;matches=334;mismatches=2;indels=0;unknowns=0;Target=comp160253_c1_seq1 336 1 .;CDS_Target=comp160253_c1_seq1 336 157 .;locus=RLOC_00008941
Chr1	stalkie_big_nohaplotig	exon	72772898	72773233	99	-	.	Parent=comp160253_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	72772898	72773077	.	-	0	Parent=comp160253_c1_seq1.mrna1
Chr1	gffcl	locus	72810690	72926205	.	+	.	ID=RLOC_00008942;geneIDs=FBgn0036511.1.path1;transcripts=FBgn0036511.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72810690	72926205	.	+	.	ID=FBgn0036511.1.mrna1;geneID=FBgn0036511.1.path1;Name=FBgn0036511.1;Dir=sensecoverage=92.6;identity=98.3;matches=5496;mismatches=64;indels=31;unknowns=0;locus=RLOC_00008942
Chr1	stalkie_big_nohaplotig	exon	72810690	72810692	100	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 457 459 +
Chr1	stalkie_big_nohaplotig	exon	72818407	72818410	100	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 460 463 +
Chr1	stalkie_big_nohaplotig	exon	72826322	72826330	100	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 464 472 +
Chr1	stalkie_big_nohaplotig	exon	72829465	72829470	100	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 539 544 +
Chr1	stalkie_big_nohaplotig	exon	72831676	72831677	100	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 545 546 +
Chr1	stalkie_big_nohaplotig	exon	72836443	72836501	56	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 547 612 +
Chr1	stalkie_big_nohaplotig	exon	72837466	72837470	100	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 613 617 +
Chr1	stalkie_big_nohaplotig	exon	72837925	72837929	100	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 618 622 +
Chr1	stalkie_big_nohaplotig	exon	72843350	72843400	43	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 623 687 +
Chr1	stalkie_big_nohaplotig	exon	72860653	72860661	100	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 688 696 +
Chr1	stalkie_big_nohaplotig	exon	72862059	72862065	100	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 697 703 +
Chr1	stalkie_big_nohaplotig	exon	72862457	72862488	42	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 704 741 +
Chr1	stalkie_big_nohaplotig	exon	72871827	72871832	100	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 742 747 +
Chr1	stalkie_big_nohaplotig	exon	72879665	72879675	100	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 748 758 +
Chr1	stalkie_big_nohaplotig	exon	72889037	72889042	100	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 797 802 +
Chr1	stalkie_big_nohaplotig	exon	72889274	72889287	85	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 803 816 +
Chr1	stalkie_big_nohaplotig	exon	72897128	72897136	100	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 817 825 +
Chr1	stalkie_big_nohaplotig	exon	72910322	72910848	99	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 845 1371 +
Chr1	stalkie_big_nohaplotig	exon	72910911	72911446	100	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 1372 1907 +
Chr1	stalkie_big_nohaplotig	exon	72920242	72921463	99	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 1908 3129 +
Chr1	stalkie_big_nohaplotig	exon	72921529	72921925	100	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 3130 3526 +
Chr1	stalkie_big_nohaplotig	exon	72921983	72922344	100	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 3527 3888 +
Chr1	stalkie_big_nohaplotig	exon	72922409	72922958	100	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 3889 4438 +
Chr1	stalkie_big_nohaplotig	exon	72923022	72923617	100	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 4439 5034 +
Chr1	stalkie_big_nohaplotig	exon	72925020	72925308	100	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 5035 5323 +
Chr1	stalkie_big_nohaplotig	exon	72925364	72926205	99	+	.	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 5324 6165 +
Chr1	stalkie_big_nohaplotig	CDS	72910342	72910848	.	+	0	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 865 1371 +
Chr1	stalkie_big_nohaplotig	CDS	72910911	72911446	.	+	0	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 1372 1907 +
Chr1	stalkie_big_nohaplotig	CDS	72920242	72921463	.	+	1	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 1908 3129 +
Chr1	stalkie_big_nohaplotig	CDS	72921529	72921925	.	+	0	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 3130 3526 +
Chr1	stalkie_big_nohaplotig	CDS	72921983	72922344	.	+	2	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 3527 3888 +
Chr1	stalkie_big_nohaplotig	CDS	72922409	72922958	.	+	0	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 3889 4438 +
Chr1	stalkie_big_nohaplotig	CDS	72923022	72923617	.	+	2	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 4439 5034 +
Chr1	stalkie_big_nohaplotig	CDS	72925020	72925308	.	+	0	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 5035 5323 +
Chr1	stalkie_big_nohaplotig	CDS	72925364	72926205	.	+	2	Parent=FBgn0036511.1.mrna1;Target=FBgn0036511.1 5324 6165 +
Chr1	gffcl	locus	72891618	72893456	.	+	.	ID=RLOC_00008943;geneIDs=comp162667_c0_seq1.path1;transcripts=comp162667_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72891618	72893456	.	+	.	ID=comp162667_c0_seq1.mrna1;geneID=comp162667_c0_seq1.path1;Name=comp162667_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=1794;mismatches=45;indels=17;unknowns=0;Target=comp162667_c0_seq1 1856 1 .;CDS_Target=comp162667_c0_seq1 1371 604 .;locus=RLOC_00008943
Chr1	stalkie_big_nohaplotig	exon	72891618	72893456	96	+	.	Parent=comp162667_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	72892208	72892975	.	+	0	Parent=comp162667_c0_seq1.mrna1
Chr1	gffcl	locus	72980276	73154713	.	-	.	ID=RLOC_00008945;geneIDs=comp134906_c0_seq1.path1;transcripts=comp134906_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72980276	73154713	.	-	.	ID=comp134906_c0_seq1.mrna1;geneID=comp134906_c0_seq1.path1;Name=comp134906_c0_seq1;Dir=indeterminatecoverage=86.1;identity=85.9;matches=603;mismatches=57;indels=42;unknowns=0;Target=comp134906_c0_seq1 310 296 .;locus=RLOC_00008945
Chr1	stalkie_big_nohaplotig	exon	72980276	72980668	99	-	.	Parent=comp134906_c0_seq1.mrna1;Target=comp134906_c0_seq1 823 429 .
Chr1	stalkie_big_nohaplotig	exon	72981367	72981376	100	-	.	Parent=comp134906_c0_seq1.mrna1;Target=comp134906_c0_seq1 422 413 .
Chr1	stalkie_big_nohaplotig	exon	72983178	72983186	100	-	.	Parent=comp134906_c0_seq1.mrna1;Target=comp134906_c0_seq1 389 381 .
Chr1	stalkie_big_nohaplotig	exon	72983606	72983608	100	-	.	Parent=comp134906_c0_seq1.mrna1;Target=comp134906_c0_seq1 380 378 .
Chr1	stalkie_big_nohaplotig	exon	73027739	73027779	56	-	.	Parent=comp134906_c0_seq1.mrna1;Target=comp134906_c0_seq1 377 332 .
Chr1	stalkie_big_nohaplotig	exon	73033736	73033740	80	-	.	Parent=comp134906_c0_seq1.mrna1;Target=comp134906_c0_seq1 331 327 .
Chr1	stalkie_big_nohaplotig	exon	73034936	73034999	53	-	.	Parent=comp134906_c0_seq1.mrna1;Target=comp134906_c0_seq1 326 266 .
Chr1	stalkie_big_nohaplotig	exon	73042060	73042066	100	-	.	Parent=comp134906_c0_seq1.mrna1;Target=comp134906_c0_seq1 265 259 .
Chr1	stalkie_big_nohaplotig	exon	73057636	73057638	100	-	.	Parent=comp134906_c0_seq1.mrna1;Target=comp134906_c0_seq1 258 256 .
Chr1	stalkie_big_nohaplotig	exon	73073100	73073102	100	-	.	Parent=comp134906_c0_seq1.mrna1;Target=comp134906_c0_seq1 255 253 .
Chr1	stalkie_big_nohaplotig	exon	73079295	73079299	100	-	.	Parent=comp134906_c0_seq1.mrna1;Target=comp134906_c0_seq1 252 248 .
Chr1	stalkie_big_nohaplotig	exon	73080376	73080379	100	-	.	Parent=comp134906_c0_seq1.mrna1;Target=comp134906_c0_seq1 247 244 .
Chr1	stalkie_big_nohaplotig	exon	73082891	73082894	100	-	.	Parent=comp134906_c0_seq1.mrna1;Target=comp134906_c0_seq1 243 240 .
Chr1	stalkie_big_nohaplotig	exon	73083969	73083973	100	-	.	Parent=comp134906_c0_seq1.mrna1;Target=comp134906_c0_seq1 239 235 .
Chr1	stalkie_big_nohaplotig	exon	73089657	73089659	100	-	.	Parent=comp134906_c0_seq1.mrna1;Target=comp134906_c0_seq1 234 232 .
Chr1	stalkie_big_nohaplotig	exon	73095463	73095474	91	-	.	Parent=comp134906_c0_seq1.mrna1;Target=comp134906_c0_seq1 231 221 .
Chr1	stalkie_big_nohaplotig	exon	73101657	73101662	100	-	.	Parent=comp134906_c0_seq1.mrna1;Target=comp134906_c0_seq1 220 215 .
Chr1	stalkie_big_nohaplotig	exon	73106858	73106907	56	-	.	Parent=comp134906_c0_seq1.mrna1;Target=comp134906_c0_seq1 214 160 .
Chr1	stalkie_big_nohaplotig	exon	73120078	73120108	51	-	.	Parent=comp134906_c0_seq1.mrna1;Target=comp134906_c0_seq1 159 143 .
Chr1	stalkie_big_nohaplotig	exon	73152179	73152186	100	-	.	Parent=comp134906_c0_seq1.mrna1;Target=comp134906_c0_seq1 139 132 .
Chr1	stalkie_big_nohaplotig	exon	73154697	73154713	88	-	.	Parent=comp134906_c0_seq1.mrna1;Target=comp134906_c0_seq1 131 115 .
Chr1	stalkie_big_nohaplotig	CDS	73034953	73034967	.	-	0	Parent=comp134906_c0_seq1.mrna1
Chr1	gffcl	locus	72980691	73199444	.	.	.	ID=RLOC_00008946;geneIDs=FBgn0036309.1.path1,FBgn0036928.1.path1,comp152429_c1_seq1.path4,comp160266_c1_seq1.path3,comp161511_c0_seq1.path1;transcripts=comp161511_c0_seq1.mrna1,FBgn0036309.1.mrna1,comp152429_c1_seq1.mrna4,comp160266_c1_seq1.mrna3,FBgn0036928.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	72980691	73118764	.	-	.	ID=comp161511_c0_seq1.mrna1;geneID=comp161511_c0_seq1.path1;Name=comp161511_c0_seq1;Dir=antisensecoverage=63.4;identity=97.9;matches=2138;mismatches=22;indels=23;unknowns=0;locus=RLOC_00008946
Chr1	stalkie_big_nohaplotig	exon	72980691	72981252	99	-	.	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 4 565 -
Chr1	stalkie_big_nohaplotig	exon	72986771	72987172	99	-	.	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 566 967 -
Chr1	stalkie_big_nohaplotig	exon	73035412	73035868	100	-	.	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 968 1424 -
Chr1	stalkie_big_nohaplotig	exon	73035925	73036416	99	-	.	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 1425 1916 -
Chr1	stalkie_big_nohaplotig	exon	73047848	73047954	100	-	.	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 1917 2023 -
Chr1	stalkie_big_nohaplotig	exon	73048247	73048255	100	-	.	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 2024 2032 -
Chr1	stalkie_big_nohaplotig	exon	73056214	73056220	100	-	.	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 2083 2089 -
Chr1	stalkie_big_nohaplotig	exon	73059799	73059805	100	-	.	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 2090 2096 -
Chr1	stalkie_big_nohaplotig	exon	73066163	73066172	100	-	.	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 2097 2106 -
Chr1	stalkie_big_nohaplotig	exon	73070276	73070283	33	-	.	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 2107 2130 -
Chr1	stalkie_big_nohaplotig	exon	73072023	73072033	100	-	.	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 2131 2141 -
Chr1	stalkie_big_nohaplotig	exon	73076372	73076384	84	-	.	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 2142 2154 -
Chr1	stalkie_big_nohaplotig	exon	73088735	73088737	100	-	.	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 2155 2157 -
Chr1	stalkie_big_nohaplotig	exon	73091919	73091960	57	-	.	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 2158 2192 -
Chr1	stalkie_big_nohaplotig	exon	73093660	73093664	100	-	.	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 2193 2197 -
Chr1	stalkie_big_nohaplotig	exon	73106943	73106946	100	-	.	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 2198 2201 -
Chr1	stalkie_big_nohaplotig	exon	73114062	73114067	100	-	.	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 2202 2207 -
Chr1	stalkie_big_nohaplotig	exon	73117473	73117483	90	-	.	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 2208 2218 -
Chr1	stalkie_big_nohaplotig	exon	73118755	73118764	90	-	.	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 2219 2228 -
Chr1	stalkie_big_nohaplotig	CDS	72980762	72981252	.	-	2	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 75 565 .
Chr1	stalkie_big_nohaplotig	CDS	72986771	72987172	.	-	2	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 566 967 .
Chr1	stalkie_big_nohaplotig	CDS	73035412	73035868	.	-	0	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 968 1424 .
Chr1	stalkie_big_nohaplotig	CDS	73035925	73036416	.	-	0	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 1425 1916 .
Chr1	stalkie_big_nohaplotig	CDS	73047848	73047892	.	-	0	Parent=comp161511_c0_seq1.mrna1;Target=comp161511_c0_seq1 1917 1961 .
Chr1	stalkie_big_nohaplotig	mRNA	72980765	73199444	.	-	.	ID=FBgn0036309.1.mrna1;geneID=FBgn0036309.1.path1;Name=FBgn0036309.1;Dir=sensecoverage=66.7;identity=98.7;matches=2104;mismatches=14;indels=13;unknowns=0;locus=RLOC_00008946
Chr1	stalkie_big_nohaplotig	exon	72980765	72981252	99	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 2690 3177 +
Chr1	stalkie_big_nohaplotig	exon	72986771	72987172	99	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 2288 2689 +
Chr1	stalkie_big_nohaplotig	exon	73035412	73035868	100	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1831 2287 +
Chr1	stalkie_big_nohaplotig	exon	73035925	73036416	99	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1339 1830 +
Chr1	stalkie_big_nohaplotig	exon	73047848	73047954	100	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1232 1338 +
Chr1	stalkie_big_nohaplotig	exon	73048247	73048255	100	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1223 1231 +
Chr1	stalkie_big_nohaplotig	exon	73053877	73053892	81	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1209 1222 +
Chr1	stalkie_big_nohaplotig	exon	73054521	73054530	100	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1199 1208 +
Chr1	stalkie_big_nohaplotig	exon	73068909	73068917	100	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1190 1198 +
Chr1	stalkie_big_nohaplotig	exon	73073629	73073635	100	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1183 1189 +
Chr1	stalkie_big_nohaplotig	exon	73088135	73088143	77	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1174 1182 +
Chr1	stalkie_big_nohaplotig	exon	73092738	73092742	100	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1169 1173 +
Chr1	stalkie_big_nohaplotig	exon	73110282	73110284	100	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1166 1168 +
Chr1	stalkie_big_nohaplotig	exon	73119372	73119376	100	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1161 1165 +
Chr1	stalkie_big_nohaplotig	exon	73126484	73126486	100	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1158 1160 +
Chr1	stalkie_big_nohaplotig	exon	73150424	73150433	100	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1148 1157 +
Chr1	stalkie_big_nohaplotig	exon	73158366	73158368	100	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1145 1147 +
Chr1	stalkie_big_nohaplotig	exon	73165481	73165488	100	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1137 1144 +
Chr1	stalkie_big_nohaplotig	exon	73166842	73166882	60	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1103 1136 +
Chr1	stalkie_big_nohaplotig	exon	73174462	73174470	100	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1094 1102 +
Chr1	stalkie_big_nohaplotig	exon	73180267	73180274	100	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1086 1093 +
Chr1	stalkie_big_nohaplotig	exon	73184124	73184130	100	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1079 1085 +
Chr1	stalkie_big_nohaplotig	exon	73191214	73191218	100	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1074 1078 +
Chr1	stalkie_big_nohaplotig	exon	73198638	73198646	100	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1065 1073 +
Chr1	stalkie_big_nohaplotig	exon	73199438	73199444	100	-	.	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1058 1064 +
Chr1	stalkie_big_nohaplotig	CDS	73047918	73047954	.	-	2	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1232 1268 +
Chr1	stalkie_big_nohaplotig	CDS	73048247	73048255	.	-	2	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1223 1231 +
Chr1	stalkie_big_nohaplotig	CDS	73053877	73053889	.	-	0	Parent=FBgn0036309.1.mrna1;Target=FBgn0036309.1 1212 1222 +
Chr1	stalkie_big_nohaplotig	mRNA	73054379	73054726	.	+	.	ID=comp152429_c1_seq1.mrna4;geneID=comp152429_c1_seq1.path4;Name=comp152429_c1_seq1;Dir=indeterminatecoverage=100.0;identity=92.5;matches=322;mismatches=26;indels=0;unknowns=0;Target=comp152429_c1_seq1 348 1 .;CDS_Target=comp152429_c1_seq1 34 2 .;locus=RLOC_00008946
Chr1	stalkie_big_nohaplotig	exon	73054379	73054726	92	+	.	Parent=comp152429_c1_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	73054380	73054412	.	+	0	Parent=comp152429_c1_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	73091233	73093234	.	-	.	ID=comp160266_c1_seq1.mrna3;geneID=comp160266_c1_seq1.path3;Name=comp160266_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1993;mismatches=9;indels=0;unknowns=0;Target=comp160266_c1_seq1 2002 1 .;CDS_Target=comp160266_c1_seq1 2002 2 .;locus=RLOC_00008946
Chr1	stalkie_big_nohaplotig	exon	73091233	73093234	99	-	.	Parent=comp160266_c1_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	73091233	73093233	.	-	0	Parent=comp160266_c1_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	73190929	73195803	.	-	.	ID=FBgn0036928.1.mrna1;geneID=FBgn0036928.1.path1;Name=FBgn0036928.1;Dir=sensecoverage=97.4;identity=100.0;matches=529;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008946
Chr1	stalkie_big_nohaplotig	exon	73190929	73191235	100	-	.	Parent=FBgn0036928.1.mrna1;Target=FBgn0036928.1 237 543 +
Chr1	stalkie_big_nohaplotig	exon	73195527	73195602	100	-	.	Parent=FBgn0036928.1.mrna1;Target=FBgn0036928.1 161 236 +
Chr1	stalkie_big_nohaplotig	exon	73195658	73195803	100	-	.	Parent=FBgn0036928.1.mrna1;Target=FBgn0036928.1 15 160 +
Chr1	stalkie_big_nohaplotig	CDS	73190929	73191235	.	-	1	Parent=FBgn0036928.1.mrna1;Target=FBgn0036928.1 237 543 +
Chr1	stalkie_big_nohaplotig	CDS	73195527	73195602	.	-	2	Parent=FBgn0036928.1.mrna1;Target=FBgn0036928.1 161 236 +
Chr1	stalkie_big_nohaplotig	CDS	73195658	73195802	.	-	0	Parent=FBgn0036928.1.mrna1;Target=FBgn0036928.1 16 160 +
Chr1	gffcl	locus	73058391	73058752	.	+	.	ID=RLOC_00008947;geneIDs=comp151573_c1_seq1.path1;transcripts=comp151573_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	73058391	73058752	.	+	.	ID=comp151573_c1_seq1.mrna1;geneID=comp151573_c1_seq1.path1;Name=comp151573_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=361;mismatches=1;indels=0;unknowns=0;Target=comp151573_c1_seq1 362 1 .;CDS_Target=comp151573_c1_seq1 120 1 .;locus=RLOC_00008947
Chr1	stalkie_big_nohaplotig	exon	73058391	73058752	99	+	.	Parent=comp151573_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	73058391	73058510	.	+	0	Parent=comp151573_c1_seq1.mrna1
Chr1	gffcl	locus	73072661	73083191	.	-	.	ID=RLOC_00008948;geneIDs=FBgn0010235.1.path2;transcripts=FBgn0010235.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	73072661	73083191	.	-	.	ID=FBgn0010235.1.mrna2;geneID=FBgn0010235.1.path2;Name=FBgn0010235.1;Dir=sensecoverage=36.7;identity=100.0;matches=592;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008948
Chr1	stalkie_big_nohaplotig	exon	73072661	73072966	100	-	.	Parent=FBgn0010235.1.mrna2;Target=FBgn0010235.1 1294 1599 +
Chr1	stalkie_big_nohaplotig	exon	73082906	73083191	100	-	.	Parent=FBgn0010235.1.mrna2;Target=FBgn0010235.1 1008 1293 +
Chr1	gffcl	locus	73124166	73124472	.	+	.	ID=RLOC_00008949;geneIDs=comp147461_c0_seq1.path1;transcripts=comp147461_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	73124166	73124472	.	+	.	ID=comp147461_c0_seq1.mrna1;geneID=comp147461_c0_seq1.path1;Name=comp147461_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=307;mismatches=0;indels=0;unknowns=0;Target=comp147461_c0_seq1 307 1 .;CDS_Target=comp147461_c0_seq1 95 3 .;locus=RLOC_00008949
Chr1	stalkie_big_nohaplotig	exon	73124166	73124472	100	+	.	Parent=comp147461_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	73124168	73124260	.	+	0	Parent=comp147461_c0_seq1.mrna1
Chr1	gffcl	locus	73124940	73125968	.	-	.	ID=RLOC_00008950;geneIDs=comp155408_c1_seq1.path1;transcripts=comp155408_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	73124940	73125968	.	-	.	ID=comp155408_c1_seq1.mrna1;geneID=comp155408_c1_seq1.path1;Name=comp155408_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1017;mismatches=12;indels=0;unknowns=0;Target=comp155408_c1_seq1 1029 1 .;CDS_Target=comp155408_c1_seq1 176 3 .;locus=RLOC_00008950
Chr1	stalkie_big_nohaplotig	exon	73124940	73125968	98	-	.	Parent=comp155408_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	73125793	73125966	.	-	0	Parent=comp155408_c1_seq1.mrna1
Chr1	gffcl	locus	73153014	73178511	.	+	.	ID=RLOC_00008951;geneIDs=FBgn0036502.1.path1,comp159384_c0_seq1.path1;transcripts=comp159384_c0_seq1.mrna1,FBgn0036502.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	73153014	73178511	.	+	.	ID=comp159384_c0_seq1.mrna1;geneID=comp159384_c0_seq1.path1;Name=comp159384_c0_seq1;Dir=sensecoverage=99.6;identity=99.7;matches=4175;mismatches=5;indels=7;unknowns=0;locus=RLOC_00008951
Chr1	stalkie_big_nohaplotig	exon	73153014	73153680	99	+	.	Parent=comp159384_c0_seq1.mrna1;Target=comp159384_c0_seq1 17 681 +
Chr1	stalkie_big_nohaplotig	exon	73166665	73166749	100	+	.	Parent=comp159384_c0_seq1.mrna1;Target=comp159384_c0_seq1 682 766 +
Chr1	stalkie_big_nohaplotig	exon	73174891	73175107	100	+	.	Parent=comp159384_c0_seq1.mrna1;Target=comp159384_c0_seq1 767 983 +
Chr1	stalkie_big_nohaplotig	exon	73175162	73175697	99	+	.	Parent=comp159384_c0_seq1.mrna1;Target=comp159384_c0_seq1 984 1515 +
Chr1	stalkie_big_nohaplotig	exon	73175768	73175893	100	+	.	Parent=comp159384_c0_seq1.mrna1;Target=comp159384_c0_seq1 1516 1641 +
Chr1	stalkie_big_nohaplotig	exon	73175957	73178511	99	+	.	Parent=comp159384_c0_seq1.mrna1;Target=comp159384_c0_seq1 1642 4197 +
Chr1	stalkie_big_nohaplotig	CDS	73153632	73153680	.	+	0	Parent=comp159384_c0_seq1.mrna1;Target=comp159384_c0_seq1 633 681 +
Chr1	stalkie_big_nohaplotig	CDS	73166665	73166749	.	+	2	Parent=comp159384_c0_seq1.mrna1;Target=comp159384_c0_seq1 682 766 +
Chr1	stalkie_big_nohaplotig	CDS	73174891	73175017	.	+	1	Parent=comp159384_c0_seq1.mrna1;Target=comp159384_c0_seq1 767 893 +
Chr1	stalkie_big_nohaplotig	mRNA	73153530	73175346	.	+	.	ID=FBgn0036502.1.mrna1;geneID=FBgn0036502.1.path1;Name=FBgn0036502.1;Dir=sensecoverage=100.0;identity=100.0;matches=588;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008951
Chr1	stalkie_big_nohaplotig	exon	73153530	73153680	100	+	.	Parent=FBgn0036502.1.mrna1;Target=FBgn0036502.1 1 151 +
Chr1	stalkie_big_nohaplotig	exon	73166665	73166749	100	+	.	Parent=FBgn0036502.1.mrna1;Target=FBgn0036502.1 152 236 +
Chr1	stalkie_big_nohaplotig	exon	73174891	73175003	100	+	.	Parent=FBgn0036502.1.mrna1;Target=FBgn0036502.1 237 349 +
Chr1	stalkie_big_nohaplotig	exon	73175054	73175107	100	+	.	Parent=FBgn0036502.1.mrna1;Target=FBgn0036502.1 350 403 +
Chr1	stalkie_big_nohaplotig	exon	73175162	73175346	100	+	.	Parent=FBgn0036502.1.mrna1;Target=FBgn0036502.1 404 588 +
Chr1	stalkie_big_nohaplotig	CDS	73153530	73153680	.	+	0	Parent=FBgn0036502.1.mrna1;Target=FBgn0036502.1 1 151 +
Chr1	stalkie_big_nohaplotig	CDS	73166665	73166749	.	+	2	Parent=FBgn0036502.1.mrna1;Target=FBgn0036502.1 152 236 +
Chr1	stalkie_big_nohaplotig	CDS	73174891	73175003	.	+	1	Parent=FBgn0036502.1.mrna1;Target=FBgn0036502.1 237 349 +
Chr1	stalkie_big_nohaplotig	CDS	73175054	73175107	.	+	2	Parent=FBgn0036502.1.mrna1;Target=FBgn0036502.1 350 403 +
Chr1	stalkie_big_nohaplotig	CDS	73175162	73175346	.	+	2	Parent=FBgn0036502.1.mrna1;Target=FBgn0036502.1 404 588 +
Chr1	gffcl	locus	73185982	73186390	.	+	.	ID=RLOC_00008953;geneIDs=comp142619_c0_seq1.path1;transcripts=comp142619_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	73185982	73186390	.	+	.	ID=comp142619_c0_seq1.mrna1;geneID=comp142619_c0_seq1.path1;Name=comp142619_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=406;mismatches=2;indels=1;unknowns=0;Target=comp142619_c0_seq1 408 1 .;CDS_Target=comp142619_c0_seq1 384 325 .;locus=RLOC_00008953
Chr1	stalkie_big_nohaplotig	exon	73185982	73186390	99	+	.	Parent=comp142619_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	73186307	73186366	.	+	0	Parent=comp142619_c0_seq1.mrna1
Chr1	gffcl	locus	73188436	73188794	.	-	.	ID=RLOC_00008954;geneIDs=comp149947_c1_seq1.path1;transcripts=comp149947_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	73188436	73188794	.	-	.	ID=comp149947_c1_seq1.mrna1;geneID=comp149947_c1_seq1.path1;Name=comp149947_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=359;mismatches=0;indels=0;unknowns=0;Target=comp149947_c1_seq1 359 1 .;CDS_Target=comp149947_c1_seq1 359 3 .;locus=RLOC_00008954
Chr1	stalkie_big_nohaplotig	exon	73188436	73188794	100	-	.	Parent=comp149947_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	73188436	73188792	.	-	0	Parent=comp149947_c1_seq1.mrna1
Chr1	gffcl	locus	73275458	73275774	.	-	.	ID=RLOC_00008956;geneIDs=comp162442_c1_seq1.path1;transcripts=comp162442_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	73275458	73275774	.	-	.	ID=comp162442_c1_seq1.mrna1;geneID=comp162442_c1_seq1.path1;Name=comp162442_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=310;mismatches=7;indels=0;unknowns=0;Target=comp162442_c1_seq1 317 1 .;CDS_Target=comp162442_c1_seq1 284 225 .;locus=RLOC_00008956
Chr1	stalkie_big_nohaplotig	exon	73275458	73275774	97	-	.	Parent=comp162442_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	73275491	73275550	.	-	0	Parent=comp162442_c1_seq1.mrna1
Chr1	gffcl	locus	73384993	73386994	.	-	.	ID=RLOC_00008957;geneIDs=comp160266_c1_seq1.path4;transcripts=comp160266_c1_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	73384993	73386994	.	-	.	ID=comp160266_c1_seq1.mrna4;geneID=comp160266_c1_seq1.path4;Name=comp160266_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1993;mismatches=9;indels=0;unknowns=0;Target=comp160266_c1_seq1 2002 1 .;CDS_Target=comp160266_c1_seq1 2002 2 .;locus=RLOC_00008957
Chr1	stalkie_big_nohaplotig	exon	73384993	73386994	99	-	.	Parent=comp160266_c1_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	73384993	73386993	.	-	0	Parent=comp160266_c1_seq1.mrna4
Chr1	gffcl	locus	73420862	73436599	.	+	.	ID=RLOC_00008958;geneIDs=comp152407_c0_seq1.path1;transcripts=comp152407_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	73420862	73436599	.	+	.	ID=comp152407_c0_seq1.mrna1;geneID=comp152407_c0_seq1.path1;Name=comp152407_c0_seq1;Dir=indeterminatecoverage=95.9;identity=96.0;matches=533;mismatches=19;indels=3;unknowns=0;Target=comp152407_c0_seq1 399 172 .;locus=RLOC_00008958
Chr1	stalkie_big_nohaplotig	exon	73420862	73421365	95	+	.	Parent=comp152407_c0_seq1.mrna1;Target=comp152407_c0_seq1 529 25 .
Chr1	stalkie_big_nohaplotig	exon	73428851	73428859	100	+	.	Parent=comp152407_c0_seq1.mrna1;Target=comp152407_c0_seq1 538 530 .
Chr1	stalkie_big_nohaplotig	exon	73429116	73429119	100	+	.	Parent=comp152407_c0_seq1.mrna1;Target=comp152407_c0_seq1 556 553 .
Chr1	stalkie_big_nohaplotig	exon	73435864	73435869	100	+	.	Parent=comp152407_c0_seq1.mrna1;Target=comp152407_c0_seq1 562 557 .
Chr1	stalkie_big_nohaplotig	exon	73436570	73436599	100	+	.	Parent=comp152407_c0_seq1.mrna1;Target=comp152407_c0_seq1 592 563 .
Chr1	stalkie_big_nohaplotig	CDS	73421009	73421235	.	+	0	Parent=comp152407_c0_seq1.mrna1
Chr1	gffcl	locus	73428290	74344679	.	-	.	ID=RLOC_00008959;geneIDs=comp139880_c1_seq1.path1;transcripts=comp139880_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	73428290	74344679	.	-	.	ID=comp139880_c1_seq1.mrna1;geneID=comp139880_c1_seq1.path1;Name=comp139880_c1_seq1;Dir=indeterminatecoverage=100.0;identity=91.7;matches=400;mismatches=35;indels=1;unknowns=0;Target=comp139880_c1_seq1 235 179 .;locus=RLOC_00008959
Chr1	stalkie_big_nohaplotig	exon	73428290	73428366	87	-	.	Parent=comp139880_c1_seq1.mrna1;Target=comp139880_c1_seq1 436 360 .
Chr1	stalkie_big_nohaplotig	exon	73434582	73434589	100	-	.	Parent=comp139880_c1_seq1.mrna1;Target=comp139880_c1_seq1 359 352 .
Chr1	stalkie_big_nohaplotig	exon	73435886	73435923	87	-	.	Parent=comp139880_c1_seq1.mrna1;Target=comp139880_c1_seq1 351 313 .
Chr1	stalkie_big_nohaplotig	exon	73438529	73438541	84	-	.	Parent=comp139880_c1_seq1.mrna1;Target=comp139880_c1_seq1 312 300 .
Chr1	stalkie_big_nohaplotig	exon	74344381	74344679	93	-	.	Parent=comp139880_c1_seq1.mrna1;Target=comp139880_c1_seq1 299 1 .
Chr1	stalkie_big_nohaplotig	CDS	74344445	74344501	.	-	0	Parent=comp139880_c1_seq1.mrna1
Chr1	gffcl	locus	73431271	73431416	.	-	.	ID=RLOC_00008960;geneIDs=comp135128_c0_seq1.path4;transcripts=comp135128_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	73431271	73431416	.	-	.	ID=comp135128_c0_seq1.mrna4;geneID=comp135128_c0_seq1.path4;Name=comp135128_c0_seq1;Dir=indeterminatecoverage=46.9;identity=84.2;matches=123;mismatches=23;indels=0;unknowns=0;Target=comp135128_c0_seq1 309 164 .;CDS_Target=comp135128_c0_seq1 215 165 .;locus=RLOC_00008960
Chr1	stalkie_big_nohaplotig	exon	73431271	73431416	84	-	.	Parent=comp135128_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	73431365	73431415	.	-	0	Parent=comp135128_c0_seq1.mrna4
Chr1	gffcl	locus	73526681	73605304	.	+	.	ID=RLOC_00008961;geneIDs=FBgn0261574.1.path1;transcripts=FBgn0261574.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	73526681	73605304	.	+	.	ID=FBgn0261574.1.mrna1;geneID=FBgn0261574.1.path1;Name=FBgn0261574.1;Dir=sensecoverage=57.9;identity=100.0;matches=4767;mismatches=2;indels=0;unknowns=0;locus=RLOC_00008961
Chr1	stalkie_big_nohaplotig	exon	73526681	73529251	100	+	.	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 866 3436 +
Chr1	stalkie_big_nohaplotig	exon	73532609	73532715	100	+	.	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 3437 3543 +
Chr1	stalkie_big_nohaplotig	exon	73532770	73532977	100	+	.	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 3544 3751 +
Chr1	stalkie_big_nohaplotig	exon	73568717	73568778	100	+	.	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 3752 3813 +
Chr1	stalkie_big_nohaplotig	exon	73589776	73589931	100	+	.	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 3814 3969 +
Chr1	stalkie_big_nohaplotig	exon	73589988	73590354	99	+	.	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 3970 4336 +
Chr1	stalkie_big_nohaplotig	exon	73595785	73596793	99	+	.	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 4337 5345 +
Chr1	stalkie_big_nohaplotig	exon	73601924	73602110	100	+	.	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 5346 5532 +
Chr1	stalkie_big_nohaplotig	exon	73602186	73602194	100	+	.	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 5646 5654 +
Chr1	stalkie_big_nohaplotig	exon	73602290	73602297	100	+	.	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 5846 5853 +
Chr1	stalkie_big_nohaplotig	exon	73602343	73602350	100	+	.	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 6825 6832 +
Chr1	stalkie_big_nohaplotig	exon	73602387	73602397	100	+	.	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 6896 6906 +
Chr1	stalkie_big_nohaplotig	exon	73602454	73602461	100	+	.	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 7067 7074 +
Chr1	stalkie_big_nohaplotig	exon	73602707	73602714	100	+	.	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 7464 7471 +
Chr1	stalkie_big_nohaplotig	exon	73602773	73602782	100	+	.	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 7691 7700 +
Chr1	stalkie_big_nohaplotig	exon	73602786	73602796	100	+	.	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 7754 7764 +
Chr1	stalkie_big_nohaplotig	exon	73602816	73602823	100	+	.	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 8365 8372 +
Chr1	stalkie_big_nohaplotig	exon	73603101	73603108	100	+	.	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 8619 8626 +
Chr1	stalkie_big_nohaplotig	exon	73605296	73605304	100	+	.	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 8702 8710 +
Chr1	stalkie_big_nohaplotig	CDS	73526683	73529251	.	+	0	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 868 3436 +
Chr1	stalkie_big_nohaplotig	CDS	73532609	73532715	.	+	2	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 3437 3543 +
Chr1	stalkie_big_nohaplotig	CDS	73532770	73532977	.	+	0	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 3544 3751 +
Chr1	stalkie_big_nohaplotig	CDS	73568717	73568778	.	+	2	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 3752 3813 +
Chr1	stalkie_big_nohaplotig	CDS	73589776	73589931	.	+	0	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 3814 3969 +
Chr1	stalkie_big_nohaplotig	CDS	73589988	73590354	.	+	0	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 3970 4336 +
Chr1	stalkie_big_nohaplotig	CDS	73595785	73596793	.	+	2	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 4337 5345 +
Chr1	stalkie_big_nohaplotig	CDS	73601924	73602110	.	+	1	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 5346 5532 +
Chr1	stalkie_big_nohaplotig	CDS	73602186	73602194	.	+	0	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 5646 5654 +
Chr1	stalkie_big_nohaplotig	CDS	73602290	73602297	.	+	0	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 5846 5853 +
Chr1	stalkie_big_nohaplotig	CDS	73602343	73602350	.	+	1	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 6825 6832 +
Chr1	stalkie_big_nohaplotig	CDS	73602387	73602397	.	+	2	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 6896 6906 +
Chr1	stalkie_big_nohaplotig	CDS	73602454	73602461	.	+	0	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 7067 7074 +
Chr1	stalkie_big_nohaplotig	CDS	73602707	73602714	.	+	1	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 7464 7471 +
Chr1	stalkie_big_nohaplotig	CDS	73602773	73602782	.	+	2	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 7691 7700 +
Chr1	stalkie_big_nohaplotig	CDS	73602786	73602796	.	+	1	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 7754 7764 +
Chr1	stalkie_big_nohaplotig	CDS	73602816	73602823	.	+	2	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 8365 8372 +
Chr1	stalkie_big_nohaplotig	CDS	73603101	73603108	.	+	0	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 8619 8626 +
Chr1	stalkie_big_nohaplotig	CDS	73605296	73605303	.	+	1	Parent=FBgn0261574.1.mrna1;Target=FBgn0261574.1 8702 8709 +
Chr1	gffcl	locus	73614770	73614968	.	-	.	ID=RLOC_00008962;geneIDs=Dp_FBgn0245446.path6;transcripts=Dp_FBgn0245446.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	73614770	73614968	.	-	.	ID=Dp_FBgn0245446.mrna6;geneID=Dp_FBgn0245446.path6;Name=Dp_FBgn0245446;Dir=indeterminatecoverage=76.2;identity=97.5;matches=194;mismatches=5;indels=0;unknowns=0;Target=Dp_FBgn0245446 199 1 .;CDS_Target=Dp_FBgn0245446 198 1 .;locus=RLOC_00008962
Chr1	stalkie_big_nohaplotig	exon	73614770	73614968	97	-	.	Parent=Dp_FBgn0245446.mrna6
Chr1	stalkie_big_nohaplotig	CDS	73614771	73614968	.	-	0	Parent=Dp_FBgn0245446.mrna6
Chr1	gffcl	locus	73696697	73697509	.	-	.	ID=RLOC_00008963;geneIDs=ORF2745.path2;transcripts=ORF2745.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	73696697	73697509	.	-	.	ID=ORF2745.mrna2;geneID=ORF2745.path2;Name=ORF2745;Dir=indeterminatecoverage=100.0;identity=98.8;matches=803;mismatches=10;indels=0;unknowns=0;Target=ORF2745 813 1 .;locus=RLOC_00008963
Chr1	stalkie_big_nohaplotig	exon	73696697	73697509	98	-	.	Parent=ORF2745.mrna2
Chr1	stalkie_big_nohaplotig	CDS	73696697	73697509	.	-	0	Parent=ORF2745.mrna2
Chr1	gffcl	locus	73726382	73727300	.	+	.	ID=RLOC_00008964;geneIDs=comp135374_c0_seq1.path1;transcripts=comp135374_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	73726382	73727300	.	+	.	ID=comp135374_c0_seq1.mrna1;geneID=comp135374_c0_seq1.path1;Name=comp135374_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=919;mismatches=0;indels=1;unknowns=0;Target=comp135374_c0_seq1 920 1 .;CDS_Target=comp135374_c0_seq1 349 206 .;locus=RLOC_00008964
Chr1	stalkie_big_nohaplotig	exon	73726382	73727300	99	+	.	Parent=comp135374_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	73726587	73726730	.	+	0	Parent=comp135374_c0_seq1.mrna1
Chr1	gffcl	locus	73727393	73728043	.	+	.	ID=RLOC_00008965;geneIDs=comp143085_c0_seq1.path1;transcripts=comp143085_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	73727393	73728043	.	+	.	ID=comp143085_c0_seq1.mrna1;geneID=comp143085_c0_seq1.path1;Name=comp143085_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=651;mismatches=0;indels=0;unknowns=0;Target=comp143085_c0_seq1 651 1 .;CDS_Target=comp143085_c0_seq1 644 441 .;locus=RLOC_00008965
Chr1	stalkie_big_nohaplotig	exon	73727393	73728043	100	+	.	Parent=comp143085_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	73727833	73728036	.	+	0	Parent=comp143085_c0_seq1.mrna1
Chr1	gffcl	locus	73728413	73752482	.	-	.	ID=RLOC_00008966;geneIDs=FBgn0036935.1.path1;transcripts=FBgn0036935.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	73728413	73752482	.	-	.	ID=FBgn0036935.1.mrna1;geneID=FBgn0036935.1.path1;Name=FBgn0036935.1;Dir=sensecoverage=100.0;identity=100.0;matches=2061;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008966
Chr1	stalkie_big_nohaplotig	exon	73728413	73728586	100	-	.	Parent=FBgn0036935.1.mrna1;Target=FBgn0036935.1 1888 2061 +
Chr1	stalkie_big_nohaplotig	exon	73728656	73728830	100	-	.	Parent=FBgn0036935.1.mrna1;Target=FBgn0036935.1 1713 1887 +
Chr1	stalkie_big_nohaplotig	exon	73737119	73737484	100	-	.	Parent=FBgn0036935.1.mrna1;Target=FBgn0036935.1 1347 1712 +
Chr1	stalkie_big_nohaplotig	exon	73750326	73750686	100	-	.	Parent=FBgn0036935.1.mrna1;Target=FBgn0036935.1 986 1346 +
Chr1	stalkie_big_nohaplotig	exon	73751498	73752482	100	-	.	Parent=FBgn0036935.1.mrna1;Target=FBgn0036935.1 1 985 +
Chr1	stalkie_big_nohaplotig	CDS	73728413	73728586	.	-	0	Parent=FBgn0036935.1.mrna1;Target=FBgn0036935.1 1888 2061 +
Chr1	stalkie_big_nohaplotig	CDS	73728656	73728830	.	-	1	Parent=FBgn0036935.1.mrna1;Target=FBgn0036935.1 1713 1887 +
Chr1	stalkie_big_nohaplotig	CDS	73737119	73737484	.	-	1	Parent=FBgn0036935.1.mrna1;Target=FBgn0036935.1 1347 1712 +
Chr1	stalkie_big_nohaplotig	CDS	73750326	73750686	.	-	2	Parent=FBgn0036935.1.mrna1;Target=FBgn0036935.1 986 1346 +
Chr1	stalkie_big_nohaplotig	CDS	73751498	73752482	.	-	0	Parent=FBgn0036935.1.mrna1;Target=FBgn0036935.1 1 985 +
Chr1	gffcl	locus	73739073	73739893	.	-	.	ID=RLOC_00008967;geneIDs=comp137386_c0_seq1.path1;transcripts=comp137386_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	73739073	73739893	.	-	.	ID=comp137386_c0_seq1.mrna1;geneID=comp137386_c0_seq1.path1;Name=comp137386_c0_seq1;Dir=sensecoverage=99.7;identity=99.9;matches=766;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008967
Chr1	stalkie_big_nohaplotig	exon	73739073	73739456	100	-	.	Parent=comp137386_c0_seq1.mrna1;Target=comp137386_c0_seq1 384 767 +
Chr1	stalkie_big_nohaplotig	exon	73739511	73739893	99	-	.	Parent=comp137386_c0_seq1.mrna1;Target=comp137386_c0_seq1 1 383 +
Chr1	stalkie_big_nohaplotig	CDS	73739401	73739456	.	-	2	Parent=comp137386_c0_seq1.mrna1;Target=comp137386_c0_seq1 384 439 +
Chr1	stalkie_big_nohaplotig	CDS	73739511	73739664	.	-	0	Parent=comp137386_c0_seq1.mrna1;Target=comp137386_c0_seq1 230 383 +
Chr1	gffcl	locus	73740470	73740914	.	-	.	ID=RLOC_00008968;geneIDs=comp165654_c1_seq1.path2;transcripts=comp165654_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	73740470	73740914	.	-	.	ID=comp165654_c1_seq1.mrna2;geneID=comp165654_c1_seq1.path2;Name=comp165654_c1_seq1;Dir=indeterminatecoverage=99.6;identity=96.6;matches=430;mismatches=14;indels=1;unknowns=0;Target=comp165654_c1_seq1 444 1 .;CDS_Target=comp165654_c1_seq1 266 180 .;locus=RLOC_00008968
Chr1	stalkie_big_nohaplotig	exon	73740470	73740914	96	-	.	Parent=comp165654_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	73740648	73740734	.	-	0	Parent=comp165654_c1_seq1.mrna2
Chr1	gffcl	locus	73755452	74404110	.	+	.	ID=RLOC_00008969;geneIDs=comp157529_c1_seq1.path1;transcripts=comp157529_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	73755452	74404110	.	+	.	ID=comp157529_c1_seq1.mrna1;geneID=comp157529_c1_seq1.path1;Name=comp157529_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1204;mismatches=3;indels=4;unknowns=0;Target=comp157529_c1_seq1 1208 261 .;locus=RLOC_00008969
Chr1	stalkie_big_nohaplotig	exon	73755452	73755697	99	+	.	Parent=comp157529_c1_seq1.mrna1;Target=comp157529_c1_seq1 246 1 .
Chr1	stalkie_big_nohaplotig	exon	74403148	74404110	99	+	.	Parent=comp157529_c1_seq1.mrna1;Target=comp157529_c1_seq1 1209 247 .
Chr1	stalkie_big_nohaplotig	CDS	74403162	74404109	.	+	0	Parent=comp157529_c1_seq1.mrna1
Chr1	gffcl	locus	73797626	73799383	.	+	.	ID=RLOC_00008970;geneIDs=FBgn0036934.1.path1;transcripts=FBgn0036934.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	73797626	73799383	.	+	.	ID=FBgn0036934.1.mrna1;geneID=FBgn0036934.1.path1;Name=FBgn0036934.1;Dir=indeterminatecoverage=99.5;identity=99.9;matches=1756;mismatches=2;indels=0;unknowns=0;Target=FBgn0036934.1 1767 10 .;locus=RLOC_00008970
Chr1	stalkie_big_nohaplotig	exon	73797626	73799383	99	+	.	Parent=FBgn0036934.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	73797626	73799383	.	+	0	Parent=FBgn0036934.1.mrna1
Chr1	gffcl	locus	73945436	73987569	.	-	.	ID=RLOC_00008971;geneIDs=ORF127.path1;transcripts=ORF127.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	73945436	73987569	.	-	.	ID=ORF127.mrna1;geneID=ORF127.path1;Name=ORF127;Dir=indeterminatecoverage=97.5;identity=99.9;matches=2816;mismatches=1;indels=1;unknowns=0;locus=RLOC_00008971
Chr1	stalkie_big_nohaplotig	exon	73945436	73946801	99	-	.	Parent=ORF127.mrna1;Target=ORF127 2889 1524 .
Chr1	stalkie_big_nohaplotig	exon	73947012	73948441	99	-	.	Parent=ORF127.mrna1;Target=ORF127 1523 95 .
Chr1	stalkie_big_nohaplotig	exon	73949302	73949311	100	-	.	Parent=ORF127.mrna1;Target=ORF127 94 85 .
Chr1	stalkie_big_nohaplotig	exon	73976146	73976147	100	-	.	Parent=ORF127.mrna1;Target=ORF127 84 83 .
Chr1	stalkie_big_nohaplotig	exon	73987560	73987569	100	-	.	Parent=ORF127.mrna1;Target=ORF127 82 73 .
Chr1	stalkie_big_nohaplotig	CDS	73945436	73946801	.	-	1	Parent=ORF127.mrna1;Target=ORF127 2889 1524 .
Chr1	stalkie_big_nohaplotig	CDS	73947012	73948354	.	-	0	Parent=ORF127.mrna1;Target=ORF127 1523 181 .
Chr1	gffcl	locus	74080372	74128874	.	+	.	ID=RLOC_00008972;geneIDs=comp155787_c0_seq1.path1;transcripts=comp155787_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	74080372	74128874	.	+	.	ID=comp155787_c0_seq1.mrna1;geneID=comp155787_c0_seq1.path1;Name=comp155787_c0_seq1;Dir=indeterminatecoverage=85.2;identity=92.4;matches=427;mismatches=33;indels=2;unknowns=0;locus=RLOC_00008972
Chr1	stalkie_big_nohaplotig	exon	74080372	74080825	92	+	.	Parent=comp155787_c0_seq1.mrna1;Target=comp155787_c0_seq1 456 1 .
Chr1	stalkie_big_nohaplotig	exon	74128869	74128874	100	+	.	Parent=comp155787_c0_seq1.mrna1;Target=comp155787_c0_seq1 462 457 .
Chr1	stalkie_big_nohaplotig	CDS	74080373	74080825	.	+	0	Parent=comp155787_c0_seq1.mrna1;Target=comp155787_c0_seq1 456 2 .
Chr1	stalkie_big_nohaplotig	CDS	74128869	74128872	.	+	0	Parent=comp155787_c0_seq1.mrna1;Target=comp155787_c0_seq1 460 457 .
Chr1	gffcl	locus	74083345	74111170	.	-	.	ID=RLOC_00008973;geneIDs=comp163757_c4_seq1.path2;transcripts=comp163757_c4_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	74083345	74111170	.	-	.	ID=comp163757_c4_seq1.mrna2;geneID=comp163757_c4_seq1.path2;Name=comp163757_c4_seq1;Dir=indeterminatecoverage=96.0;identity=97.4;matches=5087;mismatches=100;indels=35;unknowns=0;Target=comp163757_c4_seq1 4917 2380 .;locus=RLOC_00008973
Chr1	stalkie_big_nohaplotig	exon	74083345	74086457	99	-	.	Parent=comp163757_c4_seq1.mrna2;Target=comp163757_c4_seq1 5392 2280 .
Chr1	stalkie_big_nohaplotig	exon	74086755	74088830	94	-	.	Parent=comp163757_c4_seq1.mrna2;Target=comp163757_c4_seq1 2279 227 .
Chr1	stalkie_big_nohaplotig	exon	74105123	74105129	100	-	.	Parent=comp163757_c4_seq1.mrna2;Target=comp163757_c4_seq1 226 220 .
Chr1	stalkie_big_nohaplotig	exon	74110083	74110097	100	-	.	Parent=comp163757_c4_seq1.mrna2;Target=comp163757_c4_seq1 219 205 .
Chr1	stalkie_big_nohaplotig	exon	74111166	74111170	100	-	.	Parent=comp163757_c4_seq1.mrna2;Target=comp163757_c4_seq1 204 200 .
Chr1	stalkie_big_nohaplotig	CDS	74083819	74086357	.	-	0	Parent=comp163757_c4_seq1.mrna2
Chr1	gffcl	locus	74104549	74105050	.	+	.	ID=RLOC_00008974;geneIDs=comp142440_c2_seq1.path1;transcripts=comp142440_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	74104549	74105050	.	+	.	ID=comp142440_c2_seq1.mrna1;geneID=comp142440_c2_seq1.path1;Name=comp142440_c2_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=502;mismatches=0;indels=0;unknowns=0;Target=comp142440_c2_seq1 502 1 .;CDS_Target=comp142440_c2_seq1 390 202 .;locus=RLOC_00008974
Chr1	stalkie_big_nohaplotig	exon	74104549	74105050	100	+	.	Parent=comp142440_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	74104750	74104938	.	+	0	Parent=comp142440_c2_seq1.mrna1
Chr1	gffcl	locus	74107261	74109158	.	-	.	ID=RLOC_00008975;geneIDs=FBgn0036509.1.path1;transcripts=FBgn0036509.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	74107261	74109158	.	-	.	ID=FBgn0036509.1.mrna1;geneID=FBgn0036509.1.path1;Name=FBgn0036509.1;Dir=sensecoverage=100.0;identity=100.0;matches=1788;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008975
Chr1	stalkie_big_nohaplotig	exon	74107261	74107871	100	-	.	Parent=FBgn0036509.1.mrna1;Target=FBgn0036509.1 1178 1788 +
Chr1	stalkie_big_nohaplotig	exon	74107926	74108906	100	-	.	Parent=FBgn0036509.1.mrna1;Target=FBgn0036509.1 197 1177 +
Chr1	stalkie_big_nohaplotig	exon	74108963	74109158	100	-	.	Parent=FBgn0036509.1.mrna1;Target=FBgn0036509.1 1 196 +
Chr1	stalkie_big_nohaplotig	CDS	74107261	74107871	.	-	2	Parent=FBgn0036509.1.mrna1;Target=FBgn0036509.1 1178 1788 +
Chr1	stalkie_big_nohaplotig	CDS	74107926	74108906	.	-	2	Parent=FBgn0036509.1.mrna1;Target=FBgn0036509.1 197 1177 +
Chr1	stalkie_big_nohaplotig	CDS	74108963	74109158	.	-	0	Parent=FBgn0036509.1.mrna1;Target=FBgn0036509.1 1 196 +
Chr1	gffcl	locus	74127103	74127448	.	+	.	ID=RLOC_00008976;geneIDs=comp135717_c0_seq1.path1;transcripts=comp135717_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	74127103	74127448	.	+	.	ID=comp135717_c0_seq1.mrna1;geneID=comp135717_c0_seq1.path1;Name=comp135717_c0_seq1;Dir=indeterminatecoverage=92.5;identity=99.1;matches=343;mismatches=3;indels=0;unknowns=0;Target=comp135717_c0_seq1 374 29 .;CDS_Target=comp135717_c0_seq1 150 31 .;locus=RLOC_00008976
Chr1	stalkie_big_nohaplotig	exon	74127103	74127448	99	+	.	Parent=comp135717_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	74127105	74127224	.	+	0	Parent=comp135717_c0_seq1.mrna1
Chr1	gffcl	locus	74130749	74142773	.	-	.	ID=RLOC_00008977;geneIDs=FBgn0034110.1.path2;transcripts=FBgn0034110.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	74130749	74142773	.	-	.	ID=FBgn0034110.1.mrna2;geneID=FBgn0034110.1.path2;Name=FBgn0034110.1;Dir=sensecoverage=57.4;identity=100.0;matches=1398;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008977
Chr1	stalkie_big_nohaplotig	exon	74130749	74130850	100	-	.	Parent=FBgn0034110.1.mrna2;Target=FBgn0034110.1 2335 2436 +
Chr1	stalkie_big_nohaplotig	exon	74135545	74135641	100	-	.	Parent=FBgn0034110.1.mrna2;Target=FBgn0034110.1 2238 2334 +
Chr1	stalkie_big_nohaplotig	exon	74136000	74136289	100	-	.	Parent=FBgn0034110.1.mrna2;Target=FBgn0034110.1 1948 2237 +
Chr1	stalkie_big_nohaplotig	exon	74136365	74136808	100	-	.	Parent=FBgn0034110.1.mrna2;Target=FBgn0034110.1 1504 1947 +
Chr1	stalkie_big_nohaplotig	exon	74136865	74137018	100	-	.	Parent=FBgn0034110.1.mrna2;Target=FBgn0034110.1 1350 1503 +
Chr1	stalkie_big_nohaplotig	exon	74142409	74142540	100	-	.	Parent=FBgn0034110.1.mrna2;Target=FBgn0034110.1 1218 1349 +
Chr1	stalkie_big_nohaplotig	exon	74142595	74142773	100	-	.	Parent=FBgn0034110.1.mrna2;Target=FBgn0034110.1 1039 1217 +
Chr1	stalkie_big_nohaplotig	CDS	74130749	74130850	.	-	0	Parent=FBgn0034110.1.mrna2;Target=FBgn0034110.1 2335 2436 +
Chr1	stalkie_big_nohaplotig	CDS	74135545	74135641	.	-	1	Parent=FBgn0034110.1.mrna2;Target=FBgn0034110.1 2238 2334 +
Chr1	stalkie_big_nohaplotig	CDS	74136000	74136289	.	-	0	Parent=FBgn0034110.1.mrna2;Target=FBgn0034110.1 1948 2237 +
Chr1	stalkie_big_nohaplotig	CDS	74136365	74136808	.	-	0	Parent=FBgn0034110.1.mrna2;Target=FBgn0034110.1 1504 1947 +
Chr1	stalkie_big_nohaplotig	CDS	74136865	74137018	.	-	1	Parent=FBgn0034110.1.mrna2;Target=FBgn0034110.1 1350 1503 +
Chr1	stalkie_big_nohaplotig	CDS	74142409	74142540	.	-	1	Parent=FBgn0034110.1.mrna2;Target=FBgn0034110.1 1218 1349 +
Chr1	stalkie_big_nohaplotig	CDS	74142595	74142773	.	-	0	Parent=FBgn0034110.1.mrna2;Target=FBgn0034110.1 1039 1217 +
Chr1	gffcl	locus	74150203	74150685	.	-	.	ID=RLOC_00008978;geneIDs=comp161759_c0_seq1.path1;transcripts=comp161759_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	74150203	74150685	.	-	.	ID=comp161759_c0_seq1.mrna1;geneID=comp161759_c0_seq1.path1;Name=comp161759_c0_seq1;Dir=indeterminatecoverage=23.4;identity=98.3;matches=475;mismatches=7;indels=1;unknowns=0;Target=comp161759_c0_seq1 482 1 .;locus=RLOC_00008978
Chr1	stalkie_big_nohaplotig	exon	74150203	74150685	98	-	.	Parent=comp161759_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	79145316	79529212	.	-	.	ID=FBgn0030674.1.mrna1;geneID=FBgn0030674.1.path1;Name=FBgn0030674.1;Dir=sensecoverage=97.5;identity=99.5;matches=10909;mismatches=27;indels=28;unknowns=0;Target=FBgn0030674.1 642 652 +;locus=RLOC_00008979
Chr1	stalkie_big_nohaplotig	exon	79145316	79146643	99	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 10132 11460 +
Chr1	stalkie_big_nohaplotig	exon	79161674	79162305	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 9500 10131 +
Chr1	stalkie_big_nohaplotig	exon	79221149	79221281	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 9367 9499 +
Chr1	stalkie_big_nohaplotig	exon	79221336	79221857	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 8845 9366 +
Chr1	stalkie_big_nohaplotig	exon	79243459	79243718	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 8585 8844 +
Chr1	stalkie_big_nohaplotig	exon	79253322	79253624	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 8282 8584 +
Chr1	stalkie_big_nohaplotig	exon	79263931	79264632	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 7580 8281 +
Chr1	stalkie_big_nohaplotig	exon	79264688	79265024	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 7243 7579 +
Chr1	stalkie_big_nohaplotig	exon	79271067	79272035	99	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 6274 7242 +
Chr1	stalkie_big_nohaplotig	exon	79272088	79272860	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 5501 6273 +
Chr1	stalkie_big_nohaplotig	exon	79272917	79274236	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 4181 5500 +
Chr1	stalkie_big_nohaplotig	exon	79296825	79297707	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 3298 4180 +
Chr1	stalkie_big_nohaplotig	exon	79297779	79299535	99	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 1541 3297 +
Chr1	stalkie_big_nohaplotig	exon	79317246	79317748	99	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 1038 1540 +
Chr1	stalkie_big_nohaplotig	exon	79317822	79318092	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 767 1037 +
Chr1	stalkie_big_nohaplotig	exon	79337014	79337023	90	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 747 756 +
Chr1	stalkie_big_nohaplotig	exon	79348991	79349006	81	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 731 746 +
Chr1	stalkie_big_nohaplotig	exon	79372294	79372298	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 726 730 +
Chr1	stalkie_big_nohaplotig	exon	79384478	79384484	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 719 725 +
Chr1	stalkie_big_nohaplotig	exon	79406713	79406721	88	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 710 718 +
Chr1	stalkie_big_nohaplotig	exon	79426101	79426112	83	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 698 709 +
Chr1	stalkie_big_nohaplotig	exon	79428546	79428551	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 692 697 +
Chr1	stalkie_big_nohaplotig	exon	79431204	79431209	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 686 691 +
Chr1	stalkie_big_nohaplotig	exon	79452579	79452589	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 642 652 +
Chr1	stalkie_big_nohaplotig	exon	79460783	79460790	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 596 603 +
Chr1	stalkie_big_nohaplotig	exon	79474147	79474162	62	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 583 595 +
Chr1	stalkie_big_nohaplotig	exon	79481925	79481956	47	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 532 582 +
Chr1	stalkie_big_nohaplotig	exon	79482064	79482073	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 522 531 +
Chr1	stalkie_big_nohaplotig	exon	79483411	79483412	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 520 521 +
Chr1	stalkie_big_nohaplotig	exon	79487222	79487236	73	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 505 519 +
Chr1	stalkie_big_nohaplotig	exon	79494154	79494163	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 495 504 +
Chr1	stalkie_big_nohaplotig	exon	79500112	79500113	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 493 494 +
Chr1	stalkie_big_nohaplotig	exon	79505727	79505738	64	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 476 492 +
Chr1	stalkie_big_nohaplotig	exon	79507071	79507076	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 470 475 +
Chr1	stalkie_big_nohaplotig	exon	79521172	79521186	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 451 465 +
Chr1	stalkie_big_nohaplotig	exon	79523770	79523775	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 445 450 +
Chr1	stalkie_big_nohaplotig	exon	79523949	79523954	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 439 444 +
Chr1	stalkie_big_nohaplotig	exon	79529135	79529143	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 401 409 +
Chr1	stalkie_big_nohaplotig	exon	79529202	79529212	100	-	.	Parent=FBgn0030674.1.mrna1;Target=FBgn0030674.1 285 295 +
Chr1	stalkie_big_nohaplotig	CDS	79452579	79452589	.	-	1	Parent=FBgn0030674.1.mrna1
Chr1	gffcl	locus	74227494	74289130	.	+	.	ID=RLOC_00008981;geneIDs=FBgn0034110.1.path1;transcripts=FBgn0034110.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	74227494	74289130	.	+	.	ID=FBgn0034110.1.mrna1;geneID=FBgn0034110.1.path1;Name=FBgn0034110.1;Dir=sensecoverage=42.6;identity=100.0;matches=1038;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008981
Chr1	stalkie_big_nohaplotig	exon	74227494	74227536	100	+	.	Parent=FBgn0034110.1.mrna1;Target=FBgn0034110.1 1 43 +
Chr1	stalkie_big_nohaplotig	exon	74228025	74228183	100	+	.	Parent=FBgn0034110.1.mrna1;Target=FBgn0034110.1 44 202 +
Chr1	stalkie_big_nohaplotig	exon	74259776	74259953	100	+	.	Parent=FBgn0034110.1.mrna1;Target=FBgn0034110.1 203 380 +
Chr1	stalkie_big_nohaplotig	exon	74273012	74273231	100	+	.	Parent=FBgn0034110.1.mrna1;Target=FBgn0034110.1 381 600 +
Chr1	stalkie_big_nohaplotig	exon	74273286	74273410	100	+	.	Parent=FBgn0034110.1.mrna1;Target=FBgn0034110.1 601 725 +
Chr1	stalkie_big_nohaplotig	exon	74282056	74282183	100	+	.	Parent=FBgn0034110.1.mrna1;Target=FBgn0034110.1 726 853 +
Chr1	stalkie_big_nohaplotig	exon	74288946	74289130	100	+	.	Parent=FBgn0034110.1.mrna1;Target=FBgn0034110.1 854 1038 +
Chr1	stalkie_big_nohaplotig	CDS	74227494	74227536	.	+	0	Parent=FBgn0034110.1.mrna1;Target=FBgn0034110.1 1 43 +
Chr1	stalkie_big_nohaplotig	CDS	74228025	74228183	.	+	2	Parent=FBgn0034110.1.mrna1;Target=FBgn0034110.1 44 202 +
Chr1	stalkie_big_nohaplotig	CDS	74259776	74259953	.	+	2	Parent=FBgn0034110.1.mrna1;Target=FBgn0034110.1 203 380 +
Chr1	stalkie_big_nohaplotig	CDS	74273012	74273231	.	+	1	Parent=FBgn0034110.1.mrna1;Target=FBgn0034110.1 381 600 +
Chr1	stalkie_big_nohaplotig	CDS	74273286	74273410	.	+	0	Parent=FBgn0034110.1.mrna1;Target=FBgn0034110.1 601 725 +
Chr1	stalkie_big_nohaplotig	CDS	74282056	74282183	.	+	1	Parent=FBgn0034110.1.mrna1;Target=FBgn0034110.1 726 853 +
Chr1	stalkie_big_nohaplotig	CDS	74288946	74289130	.	+	2	Parent=FBgn0034110.1.mrna1;Target=FBgn0034110.1 854 1038 +
Chr1	gffcl	locus	74322252	74324248	.	-	.	ID=RLOC_00008982;geneIDs=comp153198_c3_seq1.path1;transcripts=comp153198_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	74322252	74324248	.	-	.	ID=comp153198_c3_seq1.mrna1;geneID=comp153198_c3_seq1.path1;Name=comp153198_c3_seq1;Dir=indeterminatecoverage=99.0;identity=89.5;matches=1295;mismatches=109;indels=43;unknowns=0;locus=RLOC_00008982
Chr1	stalkie_big_nohaplotig	exon	74322252	74322746	94	-	.	Parent=comp153198_c3_seq1.mrna1;Target=comp153198_c3_seq1 1458 964 .
Chr1	stalkie_big_nohaplotig	exon	74323108	74323201	86	-	.	Parent=comp153198_c3_seq1.mrna1;Target=comp153198_c3_seq1 963 870 .
Chr1	stalkie_big_nohaplotig	exon	74323417	74323484	88	-	.	Parent=comp153198_c3_seq1.mrna1;Target=comp153198_c3_seq1 869 802 .
Chr1	stalkie_big_nohaplotig	exon	74323498	74324248	86	-	.	Parent=comp153198_c3_seq1.mrna1;Target=comp153198_c3_seq1 801 16 .
Chr1	stalkie_big_nohaplotig	CDS	74322595	74322746	.	-	2	Parent=comp153198_c3_seq1.mrna1;Target=comp153198_c3_seq1 1115 964 .
Chr1	stalkie_big_nohaplotig	CDS	74323108	74323201	.	-	0	Parent=comp153198_c3_seq1.mrna1;Target=comp153198_c3_seq1 963 870 .
Chr1	stalkie_big_nohaplotig	CDS	74323417	74323431	.	-	0	Parent=comp153198_c3_seq1.mrna1;Target=comp153198_c3_seq1 869 855 .
Chr1	gffcl	locus	74334901	74336024	.	+	.	ID=RLOC_00008983;geneIDs=comp149371_c1_seq1.path1;transcripts=comp149371_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	74334901	74336024	.	+	.	ID=comp149371_c1_seq1.mrna1;geneID=comp149371_c1_seq1.path1;Name=comp149371_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1123;mismatches=1;indels=0;unknowns=0;Target=comp149371_c1_seq1 1124 1 .;CDS_Target=comp149371_c1_seq1 470 237 .;locus=RLOC_00008983
Chr1	stalkie_big_nohaplotig	exon	74334901	74336024	99	+	.	Parent=comp149371_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	74335137	74335370	.	+	0	Parent=comp149371_c1_seq1.mrna1
Chr1	gffcl	locus	74338255	74374102	.	+	.	ID=RLOC_00008984;geneIDs=FBgn0046687.1.path1;transcripts=FBgn0046687.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	74338255	74374102	.	+	.	ID=FBgn0046687.1.mrna1;geneID=FBgn0046687.1.path1;Name=FBgn0046687.1;Dir=sensecoverage=81.4;identity=100.0;matches=901;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008984
Chr1	stalkie_big_nohaplotig	exon	74338255	74338347	100	+	.	Parent=FBgn0046687.1.mrna1;Target=FBgn0046687.1 23 115 +
Chr1	stalkie_big_nohaplotig	exon	74342225	74342370	100	+	.	Parent=FBgn0046687.1.mrna1;Target=FBgn0046687.1 116 261 +
Chr1	stalkie_big_nohaplotig	exon	74342426	74342526	100	+	.	Parent=FBgn0046687.1.mrna1;Target=FBgn0046687.1 262 362 +
Chr1	stalkie_big_nohaplotig	exon	74373451	74373553	100	+	.	Parent=FBgn0046687.1.mrna1;Target=FBgn0046687.1 363 465 +
Chr1	stalkie_big_nohaplotig	exon	74373645	74374102	100	+	.	Parent=FBgn0046687.1.mrna1;Target=FBgn0046687.1 466 923 +
Chr1	stalkie_big_nohaplotig	CDS	74338257	74338347	.	+	0	Parent=FBgn0046687.1.mrna1;Target=FBgn0046687.1 25 115 +
Chr1	stalkie_big_nohaplotig	CDS	74342225	74342370	.	+	2	Parent=FBgn0046687.1.mrna1;Target=FBgn0046687.1 116 261 +
Chr1	stalkie_big_nohaplotig	CDS	74342426	74342526	.	+	0	Parent=FBgn0046687.1.mrna1;Target=FBgn0046687.1 262 362 +
Chr1	stalkie_big_nohaplotig	CDS	74373451	74373553	.	+	1	Parent=FBgn0046687.1.mrna1;Target=FBgn0046687.1 363 465 +
Chr1	stalkie_big_nohaplotig	CDS	74373645	74374100	.	+	0	Parent=FBgn0046687.1.mrna1;Target=FBgn0046687.1 466 921 +
Chr1	gffcl	locus	74450331	74451600	.	-	.	ID=RLOC_00008985;geneIDs=comp122169_c0_seq1.path1;transcripts=comp122169_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	74450331	74451600	.	-	.	ID=comp122169_c0_seq1.mrna1;geneID=comp122169_c0_seq1.path1;Name=comp122169_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=709;mismatches=1;indels=1;unknowns=0;locus=RLOC_00008985
Chr1	stalkie_big_nohaplotig	exon	74450331	74450791	99	-	.	Parent=comp122169_c0_seq1.mrna1;Target=comp122169_c0_seq1 1 461 -
Chr1	stalkie_big_nohaplotig	exon	74451352	74451600	99	-	.	Parent=comp122169_c0_seq1.mrna1;Target=comp122169_c0_seq1 462 711 -
Chr1	stalkie_big_nohaplotig	CDS	74450771	74450791	.	-	1	Parent=comp122169_c0_seq1.mrna1;Target=comp122169_c0_seq1 441 461 .
Chr1	stalkie_big_nohaplotig	CDS	74451352	74451404	.	-	0	Parent=comp122169_c0_seq1.mrna1;Target=comp122169_c0_seq1 462 515 .
Chr1	gffcl	locus	74452021	74452394	.	-	.	ID=RLOC_00008986;geneIDs=comp828146_c0_seq1.path1;transcripts=comp828146_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	74452021	74452394	.	-	.	ID=comp828146_c0_seq1.mrna1;geneID=comp828146_c0_seq1.path1;Name=comp828146_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=374;mismatches=0;indels=0;unknowns=0;Target=comp828146_c0_seq1 374 1 .;CDS_Target=comp828146_c0_seq1 263 165 .;locus=RLOC_00008986
Chr1	stalkie_big_nohaplotig	exon	74452021	74452394	100	-	.	Parent=comp828146_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	74452132	74452230	.	-	0	Parent=comp828146_c0_seq1.mrna1
Chr1	gffcl	locus	74507071	74508844	.	+	.	ID=RLOC_00008987;geneIDs=comp159257_c1_seq1.path1;transcripts=comp159257_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	74507071	74508844	.	+	.	ID=comp159257_c1_seq1.mrna1;geneID=comp159257_c1_seq1.path1;Name=comp159257_c1_seq1;Dir=sensecoverage=100.0;identity=98.4;matches=1289;mismatches=12;indels=9;unknowns=0;locus=RLOC_00008987
Chr1	stalkie_big_nohaplotig	exon	74507071	74507695	99	+	.	Parent=comp159257_c1_seq1.mrna1;Target=comp159257_c1_seq1 1 625 +
Chr1	stalkie_big_nohaplotig	exon	74507832	74507885	100	+	.	Parent=comp159257_c1_seq1.mrna1;Target=comp159257_c1_seq1 626 679 +
Chr1	stalkie_big_nohaplotig	exon	74507975	74508223	99	+	.	Parent=comp159257_c1_seq1.mrna1;Target=comp159257_c1_seq1 680 928 +
Chr1	stalkie_big_nohaplotig	exon	74508287	74508314	100	+	.	Parent=comp159257_c1_seq1.mrna1;Target=comp159257_c1_seq1 929 956 +
Chr1	stalkie_big_nohaplotig	exon	74508385	74508459	93	+	.	Parent=comp159257_c1_seq1.mrna1;Target=comp159257_c1_seq1 957 1032 +
Chr1	stalkie_big_nohaplotig	exon	74508573	74508844	94	+	.	Parent=comp159257_c1_seq1.mrna1;Target=comp159257_c1_seq1 1033 1308 +
Chr1	stalkie_big_nohaplotig	CDS	74507693	74507695	.	+	0	Parent=comp159257_c1_seq1.mrna1;Target=comp159257_c1_seq1 623 625 +
Chr1	stalkie_big_nohaplotig	CDS	74507832	74507885	.	+	0	Parent=comp159257_c1_seq1.mrna1;Target=comp159257_c1_seq1 626 679 +
Chr1	stalkie_big_nohaplotig	CDS	74507975	74508223	.	+	0	Parent=comp159257_c1_seq1.mrna1;Target=comp159257_c1_seq1 680 928 +
Chr1	stalkie_big_nohaplotig	CDS	74508287	74508314	.	+	0	Parent=comp159257_c1_seq1.mrna1;Target=comp159257_c1_seq1 929 956 +
Chr1	stalkie_big_nohaplotig	CDS	74508385	74508448	.	+	2	Parent=comp159257_c1_seq1.mrna1;Target=comp159257_c1_seq1 957 1021 +
Chr1	gffcl	locus	74509264	74510009	.	-	.	ID=RLOC_00008988;geneIDs=comp86524_c0_seq1.path3;transcripts=comp86524_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	74509264	74510009	.	-	.	ID=comp86524_c0_seq1.mrna3;geneID=comp86524_c0_seq1.path3;Name=comp86524_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=605;mismatches=1;indels=0;unknowns=0;locus=RLOC_00008988
Chr1	stalkie_big_nohaplotig	exon	74509264	74509523	99	-	.	Parent=comp86524_c0_seq1.mrna3;Target=comp86524_c0_seq1 347 606 +
Chr1	stalkie_big_nohaplotig	exon	74509583	74509733	100	-	.	Parent=comp86524_c0_seq1.mrna3;Target=comp86524_c0_seq1 196 346 +
Chr1	stalkie_big_nohaplotig	exon	74509815	74510009	100	-	.	Parent=comp86524_c0_seq1.mrna3;Target=comp86524_c0_seq1 1 195 +
Chr1	stalkie_big_nohaplotig	CDS	74509601	74509733	.	-	1	Parent=comp86524_c0_seq1.mrna3;Target=comp86524_c0_seq1 196 328 +
Chr1	stalkie_big_nohaplotig	CDS	74509815	74510008	.	-	0	Parent=comp86524_c0_seq1.mrna3;Target=comp86524_c0_seq1 2 195 +
Chr1	gffcl	locus	74549394	74549666	.	-	.	ID=RLOC_00008989;geneIDs=comp134817_c0_seq1.path1;transcripts=comp134817_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	74549394	74549666	.	-	.	ID=comp134817_c0_seq1.mrna1;geneID=comp134817_c0_seq1.path1;Name=comp134817_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=273;mismatches=0;indels=0;unknowns=0;Target=comp134817_c0_seq1 273 1 .;CDS_Target=comp134817_c0_seq1 125 3 .;locus=RLOC_00008989
Chr1	stalkie_big_nohaplotig	exon	74549394	74549666	100	-	.	Parent=comp134817_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	74549542	74549664	.	-	0	Parent=comp134817_c0_seq1.mrna1
Chr1	gffcl	locus	74567085	74744481	.	-	.	ID=RLOC_00008990;geneIDs=comp163341_c3_seq1.path1,comp163775_c1_seq1.path2;transcripts=comp163341_c3_seq1.mrna1,comp163775_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	74567085	74744481	.	-	.	ID=comp163341_c3_seq1.mrna1;geneID=comp163341_c3_seq1.path1;Name=comp163341_c3_seq1;Dir=indeterminatecoverage=88.8;identity=94.2;matches=1042;mismatches=24;indels=40;unknowns=0;Target=comp163341_c3_seq1 252 1 .;locus=RLOC_00008990
Chr1	stalkie_big_nohaplotig	exon	74567085	74567141	89	-	.	Parent=comp163341_c3_seq1.mrna1;Target=comp163341_c3_seq1 1520 1462 .
Chr1	stalkie_big_nohaplotig	exon	74567237	74567250	100	-	.	Parent=comp163341_c3_seq1.mrna1;Target=comp163341_c3_seq1 1445 1432 .
Chr1	stalkie_big_nohaplotig	exon	74568989	74568994	100	-	.	Parent=comp163341_c3_seq1.mrna1;Target=comp163341_c3_seq1 1431 1426 .
Chr1	stalkie_big_nohaplotig	exon	74575130	74575136	100	-	.	Parent=comp163341_c3_seq1.mrna1;Target=comp163341_c3_seq1 1425 1419 .
Chr1	stalkie_big_nohaplotig	exon	74579000	74579003	75	-	.	Parent=comp163341_c3_seq1.mrna1;Target=comp163341_c3_seq1 1418 1415 .
Chr1	stalkie_big_nohaplotig	exon	74585989	74585999	100	-	.	Parent=comp163341_c3_seq1.mrna1;Target=comp163341_c3_seq1 1414 1404 .
Chr1	stalkie_big_nohaplotig	exon	74589300	74589301	100	-	.	Parent=comp163341_c3_seq1.mrna1;Target=comp163341_c3_seq1 1403 1402 .
Chr1	stalkie_big_nohaplotig	exon	74595303	74595307	100	-	.	Parent=comp163341_c3_seq1.mrna1;Target=comp163341_c3_seq1 1401 1397 .
Chr1	stalkie_big_nohaplotig	exon	74595423	74595452	56	-	.	Parent=comp163341_c3_seq1.mrna1;Target=comp163341_c3_seq1 1395 1375 .
Chr1	stalkie_big_nohaplotig	exon	74596984	74596994	100	-	.	Parent=comp163341_c3_seq1.mrna1;Target=comp163341_c3_seq1 1137 1127 .
Chr1	stalkie_big_nohaplotig	exon	74606792	74606796	100	-	.	Parent=comp163341_c3_seq1.mrna1;Target=comp163341_c3_seq1 1007 1003 .
Chr1	stalkie_big_nohaplotig	exon	74612470	74612488	78	-	.	Parent=comp163341_c3_seq1.mrna1;Target=comp163341_c3_seq1 1002 984 .
Chr1	stalkie_big_nohaplotig	exon	74615653	74615675	33	-	.	Parent=comp163341_c3_seq1.mrna1;Target=comp163341_c3_seq1 955 905 .
Chr1	stalkie_big_nohaplotig	exon	74653803	74653813	100	-	.	Parent=comp163341_c3_seq1.mrna1;Target=comp163341_c3_seq1 904 894 .
Chr1	stalkie_big_nohaplotig	exon	74743613	74744481	99	-	.	Parent=comp163341_c3_seq1.mrna1;Target=comp163341_c3_seq1 868 1 .
Chr1	stalkie_big_nohaplotig	CDS	74744230	74744481	.	-	0	Parent=comp163341_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	74614491	74617801	.	-	.	ID=comp163775_c1_seq1.mrna2;geneID=comp163775_c1_seq1.path2;Name=comp163775_c1_seq1;Dir=indeterminatecoverage=98.9;identity=95.9;matches=2651;mismatches=113;indels=1;unknowns=0;Target=comp163775_c1_seq1 659 466 .;locus=RLOC_00008990
Chr1	stalkie_big_nohaplotig	exon	74614491	74616642	97	-	.	Parent=comp163775_c1_seq1.mrna2;Target=comp163775_c1_seq1 2840 689 .
Chr1	stalkie_big_nohaplotig	exon	74617126	74617559	91	-	.	Parent=comp163775_c1_seq1.mrna2;Target=comp163775_c1_seq1 659 226 .
Chr1	stalkie_big_nohaplotig	exon	74617624	74617801	87	-	.	Parent=comp163775_c1_seq1.mrna2;Target=comp163775_c1_seq1 210 32 .
Chr1	stalkie_big_nohaplotig	CDS	74617126	74617319	.	-	0	Parent=comp163775_c1_seq1.mrna2
Chr1	gffcl	locus	74611491	74612918	.	+	.	ID=RLOC_00008991;geneIDs=FBgn0029851.1.path1;transcripts=FBgn0029851.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	74611491	74612918	.	+	.	ID=FBgn0029851.1.mrna1;geneID=FBgn0029851.1.path1;Name=FBgn0029851.1;Dir=sensecoverage=100.0;identity=99.7;matches=781;mismatches=1;indels=1;unknowns=0;locus=RLOC_00008991
Chr1	stalkie_big_nohaplotig	exon	74611491	74611740	100	+	.	Parent=FBgn0029851.1.mrna1;Target=FBgn0029851.1 1 250 +
Chr1	stalkie_big_nohaplotig	exon	74612184	74612383	100	+	.	Parent=FBgn0029851.1.mrna1;Target=FBgn0029851.1 251 450 +
Chr1	stalkie_big_nohaplotig	exon	74612529	74612706	99	+	.	Parent=FBgn0029851.1.mrna1;Target=FBgn0029851.1 451 628 +
Chr1	stalkie_big_nohaplotig	exon	74612765	74612918	99	+	.	Parent=FBgn0029851.1.mrna1;Target=FBgn0029851.1 629 783 +
Chr1	stalkie_big_nohaplotig	CDS	74611491	74611740	.	+	0	Parent=FBgn0029851.1.mrna1;Target=FBgn0029851.1 1 250 +
Chr1	stalkie_big_nohaplotig	CDS	74612184	74612383	.	+	2	Parent=FBgn0029851.1.mrna1;Target=FBgn0029851.1 251 450 +
Chr1	stalkie_big_nohaplotig	CDS	74612529	74612706	.	+	0	Parent=FBgn0029851.1.mrna1;Target=FBgn0029851.1 451 628 +
Chr1	stalkie_big_nohaplotig	CDS	74612765	74612918	.	+	2	Parent=FBgn0029851.1.mrna1;Target=FBgn0029851.1 629 783 +
Chr1	gffcl	locus	74719665	74720965	.	+	.	ID=RLOC_00008992;geneIDs=ORF867.path2;transcripts=ORF867.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	74719665	74720965	.	+	.	ID=ORF867.mrna2;geneID=ORF867.path2;Name=ORF867;Dir=indeterminatecoverage=94.6;identity=94.7;matches=1239;mismatches=56;indels=14;unknowns=0;Target=ORF867 1373 71 .;CDS_Target=ORF867 1371 71 .;locus=RLOC_00008992
Chr1	stalkie_big_nohaplotig	exon	74719665	74720965	94	+	.	Parent=ORF867.mrna2
Chr1	stalkie_big_nohaplotig	CDS	74719665	74720963	.	+	1	Parent=ORF867.mrna2
Chr1	gffcl	locus	74744846	74745467	.	+	.	ID=RLOC_00008993;geneIDs=comp163264_c0_seq1.path1;transcripts=comp163264_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	74744846	74745467	.	+	.	ID=comp163264_c0_seq1.mrna1;geneID=comp163264_c0_seq1.path1;Name=comp163264_c0_seq1;Dir=indeterminatecoverage=59.8;identity=99.0;matches=616;mismatches=2;indels=4;unknowns=0;Target=comp163264_c0_seq1 618 1 .;CDS_Target=comp163264_c0_seq1 314 63 .;locus=RLOC_00008993
Chr1	stalkie_big_nohaplotig	exon	74744846	74745467	99	+	.	Parent=comp163264_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	74744912	74745163	.	+	0	Parent=comp163264_c0_seq1.mrna1
Chr1	gffcl	locus	74767982	74865607	.	-	.	ID=RLOC_00008994;geneIDs=FBgn0040918.1.path1;transcripts=FBgn0040918.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	74767982	74865607	.	-	.	ID=FBgn0040918.1.mrna1;geneID=FBgn0040918.1.path1;Name=FBgn0040918.1;Dir=sensecoverage=90.2;identity=100.0;matches=1044;mismatches=0;indels=0;unknowns=0;locus=RLOC_00008994
Chr1	stalkie_big_nohaplotig	exon	74767982	74768126	100	-	.	Parent=FBgn0040918.1.mrna1;Target=FBgn0040918.1 900 1044 +
Chr1	stalkie_big_nohaplotig	exon	74798322	74798437	100	-	.	Parent=FBgn0040918.1.mrna1;Target=FBgn0040918.1 784 899 +
Chr1	stalkie_big_nohaplotig	exon	74822827	74823048	100	-	.	Parent=FBgn0040918.1.mrna1;Target=FBgn0040918.1 562 783 +
Chr1	stalkie_big_nohaplotig	exon	74858375	74858596	100	-	.	Parent=FBgn0040918.1.mrna1;Target=FBgn0040918.1 340 561 +
Chr1	stalkie_big_nohaplotig	exon	74858722	74858842	100	-	.	Parent=FBgn0040918.1.mrna1;Target=FBgn0040918.1 219 339 +
Chr1	stalkie_big_nohaplotig	exon	74865390	74865607	100	-	.	Parent=FBgn0040918.1.mrna1;Target=FBgn0040918.1 1 218 +
Chr1	stalkie_big_nohaplotig	CDS	74767982	74768126	.	-	1	Parent=FBgn0040918.1.mrna1;Target=FBgn0040918.1 900 1044 +
Chr1	stalkie_big_nohaplotig	CDS	74798322	74798437	.	-	0	Parent=FBgn0040918.1.mrna1;Target=FBgn0040918.1 784 899 +
Chr1	stalkie_big_nohaplotig	CDS	74822827	74823048	.	-	0	Parent=FBgn0040918.1.mrna1;Target=FBgn0040918.1 562 783 +
Chr1	stalkie_big_nohaplotig	CDS	74858375	74858596	.	-	0	Parent=FBgn0040918.1.mrna1;Target=FBgn0040918.1 340 561 +
Chr1	stalkie_big_nohaplotig	CDS	74858722	74858842	.	-	1	Parent=FBgn0040918.1.mrna1;Target=FBgn0040918.1 219 339 +
Chr1	stalkie_big_nohaplotig	CDS	74865390	74865607	.	-	0	Parent=FBgn0040918.1.mrna1;Target=FBgn0040918.1 1 218 +
Chr1	gffcl	locus	74998836	74999126	.	-	.	ID=RLOC_00008998;geneIDs=Dp_FBgn0249326.path1;transcripts=Dp_FBgn0249326.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	74998836	74999126	.	-	.	ID=Dp_FBgn0249326.mrna1;geneID=Dp_FBgn0249326.path1;Name=Dp_FBgn0249326;Dir=indeterminatecoverage=100.0;identity=92.8;matches=270;mismatches=21;indels=0;unknowns=0;Target=Dp_FBgn0249326 291 1 .;locus=RLOC_00008998
Chr1	stalkie_big_nohaplotig	exon	74998836	74999126	92	-	.	Parent=Dp_FBgn0249326.mrna1
Chr1	stalkie_big_nohaplotig	CDS	74998836	74999126	.	-	0	Parent=Dp_FBgn0249326.mrna1
Chr1	gffcl	locus	75032013	75033610	.	-	.	ID=RLOC_00008999;geneIDs=comp158059_c2_seq1.path1;transcripts=comp158059_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	75032013	75033610	.	-	.	ID=comp158059_c2_seq1.mrna1;geneID=comp158059_c2_seq1.path1;Name=comp158059_c2_seq1;Dir=indeterminatecoverage=23.2;identity=93.3;matches=629;mismatches=36;indels=9;unknowns=0;Target=comp158059_c2_seq1 2566 2357 .;locus=RLOC_00008999
Chr1	stalkie_big_nohaplotig	exon	75032013	75032136	95	-	.	Parent=comp158059_c2_seq1.mrna1;Target=comp158059_c2_seq1 2910 2787 .
Chr1	stalkie_big_nohaplotig	exon	75032798	75033292	92	-	.	Parent=comp158059_c2_seq1.mrna1;Target=comp158059_c2_seq1 2786 2291 .
Chr1	stalkie_big_nohaplotig	exon	75033372	75033374	100	-	.	Parent=comp158059_c2_seq1.mrna1;Target=comp158059_c2_seq1 2290 2288 .
Chr1	stalkie_big_nohaplotig	exon	75033564	75033610	95	-	.	Parent=comp158059_c2_seq1.mrna1;Target=comp158059_c2_seq1 2282 2236 .
Chr1	stalkie_big_nohaplotig	CDS	75033018	75033222	.	-	0	Parent=comp158059_c2_seq1.mrna1
Chr1	gffcl	locus	75091085	75093025	.	-	.	ID=RLOC_00009000;geneIDs=comp163611_c0_seq1.path2;transcripts=comp163611_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	75091085	75093025	.	-	.	ID=comp163611_c0_seq1.mrna2;geneID=comp163611_c0_seq1.path2;Name=comp163611_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1934;mismatches=7;indels=0;unknowns=0;Target=comp163611_c0_seq1 1941 1 .;locus=RLOC_00009000
Chr1	stalkie_big_nohaplotig	exon	75091085	75093025	99	-	.	Parent=comp163611_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	75091085	75093025	.	-	0	Parent=comp163611_c0_seq1.mrna2
Chr1	gffcl	locus	75145807	75146106	.	+	.	ID=RLOC_00009001;geneIDs=comp163840_c0_seq1.path2;transcripts=comp163840_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	75145807	75146106	.	+	.	ID=comp163840_c0_seq1.mrna2;geneID=comp163840_c0_seq1.path2;Name=comp163840_c0_seq1;Dir=indeterminatecoverage=12.8;identity=98.7;matches=296;mismatches=4;indels=0;unknowns=0;Target=comp163840_c0_seq1 2351 2052 .;locus=RLOC_00009001
Chr1	stalkie_big_nohaplotig	exon	75145807	75146106	98	+	.	Parent=comp163840_c0_seq1.mrna2
Chr1	gffcl	locus	75328434	75375909	.	+	.	ID=RLOC_00009004;geneIDs=comp58340_c0_seq1.path2;transcripts=comp58340_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	75328434	75375909	.	+	.	ID=comp58340_c0_seq1.mrna2;geneID=comp58340_c0_seq1.path2;Name=comp58340_c0_seq1;Dir=indeterminatecoverage=92.2;identity=92.5;matches=357;mismatches=23;indels=6;unknowns=0;Target=comp58340_c0_seq1 35 15 .;locus=RLOC_00009004
Chr1	stalkie_big_nohaplotig	exon	75328434	75328591	92	+	.	Parent=comp58340_c0_seq1.mrna2;Target=comp58340_c0_seq1 173 13 .
Chr1	stalkie_big_nohaplotig	exon	75334716	75334722	100	+	.	Parent=comp58340_c0_seq1.mrna2;Target=comp58340_c0_seq1 180 174 .
Chr1	stalkie_big_nohaplotig	exon	75337386	75337389	100	+	.	Parent=comp58340_c0_seq1.mrna2;Target=comp58340_c0_seq1 184 181 .
Chr1	stalkie_big_nohaplotig	exon	75345356	75345374	73	+	.	Parent=comp58340_c0_seq1.mrna2;Target=comp58340_c0_seq1 203 185 .
Chr1	stalkie_big_nohaplotig	exon	75348174	75348178	100	+	.	Parent=comp58340_c0_seq1.mrna2;Target=comp58340_c0_seq1 208 204 .
Chr1	stalkie_big_nohaplotig	exon	75352885	75352890	100	+	.	Parent=comp58340_c0_seq1.mrna2;Target=comp58340_c0_seq1 214 209 .
Chr1	stalkie_big_nohaplotig	exon	75364195	75364206	100	+	.	Parent=comp58340_c0_seq1.mrna2;Target=comp58340_c0_seq1 226 215 .
Chr1	stalkie_big_nohaplotig	exon	75370708	75370710	100	+	.	Parent=comp58340_c0_seq1.mrna2;Target=comp58340_c0_seq1 231 229 .
Chr1	stalkie_big_nohaplotig	exon	75375744	75375909	92	+	.	Parent=comp58340_c0_seq1.mrna2;Target=comp58340_c0_seq1 400 232 .
Chr1	stalkie_big_nohaplotig	CDS	75328436	75328456	.	+	0	Parent=comp58340_c0_seq1.mrna2
Chr1	gffcl	locus	75346738	75350286	.	+	.	ID=RLOC_00009006;geneIDs=comp163911_c1_seq1.path2;transcripts=comp163911_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	75346738	75350286	.	+	.	ID=comp163911_c1_seq1.mrna2;geneID=comp163911_c1_seq1.path2;Name=comp163911_c1_seq1;Dir=antisensecoverage=89.0;identity=93.9;matches=1451;mismatches=61;indels=34;unknowns=0;Target=comp163911_c1_seq1 387 425 .;locus=RLOC_00009006
Chr1	stalkie_big_nohaplotig	exon	75346738	75347482	96	+	.	Parent=comp163911_c1_seq1.mrna2;Target=comp163911_c1_seq1 959 1704 -
Chr1	stalkie_big_nohaplotig	exon	75348990	75349559	95	+	.	Parent=comp163911_c1_seq1.mrna2;Target=comp163911_c1_seq1 387 958 -
Chr1	stalkie_big_nohaplotig	exon	75350061	75350286	81	+	.	Parent=comp163911_c1_seq1.mrna2;Target=comp163911_c1_seq1 188 386 -
Chr1	stalkie_big_nohaplotig	CDS	75349520	75349559	.	+	2	Parent=comp163911_c1_seq1.mrna2
Chr1	gffcl	locus	75394862	75395758	.	-	.	ID=RLOC_00009007;geneIDs=comp157461_c0_seq1.path1;transcripts=comp157461_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	75394862	75395758	.	-	.	ID=comp157461_c0_seq1.mrna1;geneID=comp157461_c0_seq1.path1;Name=comp157461_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=896;mismatches=1;indels=0;unknowns=0;Target=comp157461_c0_seq1 897 1 .;CDS_Target=comp157461_c0_seq1 676 482 .;locus=RLOC_00009007
Chr1	stalkie_big_nohaplotig	exon	75394862	75395758	99	-	.	Parent=comp157461_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	75395083	75395277	.	-	0	Parent=comp157461_c0_seq1.mrna1
Chr1	gffcl	locus	75452754	75453329	.	-	.	ID=RLOC_00009010;geneIDs=comp158500_c0_seq1.path4;transcripts=comp158500_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	75452754	75453329	.	-	.	ID=comp158500_c0_seq1.mrna4;geneID=comp158500_c0_seq1.path4;Name=comp158500_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=560;mismatches=13;indels=3;unknowns=0;Target=comp158500_c0_seq1 573 1 .;CDS_Target=comp158500_c0_seq1 571 410 .;locus=RLOC_00009010
Chr1	stalkie_big_nohaplotig	exon	75452754	75453329	97	-	.	Parent=comp158500_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	75452756	75452917	.	-	0	Parent=comp158500_c0_seq1.mrna4
Chr1	gffcl	locus	75515644	75522186	.	+	.	ID=RLOC_00009011;geneIDs=FBgn0029939.1.path1;transcripts=FBgn0029939.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	75515644	75522186	.	+	.	ID=FBgn0029939.1.mrna1;geneID=FBgn0029939.1.path1;Name=FBgn0029939.1;Dir=sensecoverage=98.7;identity=100.0;matches=2993;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009011
Chr1	stalkie_big_nohaplotig	exon	75515644	75515796	100	+	.	Parent=FBgn0029939.1.mrna1;Target=FBgn0029939.1 41 193 +
Chr1	stalkie_big_nohaplotig	exon	75515854	75516036	100	+	.	Parent=FBgn0029939.1.mrna1;Target=FBgn0029939.1 194 376 +
Chr1	stalkie_big_nohaplotig	exon	75516108	75516356	100	+	.	Parent=FBgn0029939.1.mrna1;Target=FBgn0029939.1 377 625 +
Chr1	stalkie_big_nohaplotig	exon	75519779	75522186	100	+	.	Parent=FBgn0029939.1.mrna1;Target=FBgn0029939.1 626 3033 +
Chr1	stalkie_big_nohaplotig	CDS	75515646	75515796	.	+	0	Parent=FBgn0029939.1.mrna1;Target=FBgn0029939.1 43 193 +
Chr1	stalkie_big_nohaplotig	CDS	75515854	75516036	.	+	2	Parent=FBgn0029939.1.mrna1;Target=FBgn0029939.1 194 376 +
Chr1	stalkie_big_nohaplotig	CDS	75516108	75516356	.	+	2	Parent=FBgn0029939.1.mrna1;Target=FBgn0029939.1 377 625 +
Chr1	stalkie_big_nohaplotig	CDS	75519779	75522186	.	+	2	Parent=FBgn0029939.1.mrna1;Target=FBgn0029939.1 626 3033 +
Chr1	gffcl	locus	75523227	75523962	.	+	.	ID=RLOC_00009012;geneIDs=comp101833_c0_seq1.path1;transcripts=comp101833_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	75523227	75523962	.	+	.	ID=comp101833_c0_seq1.mrna1;geneID=comp101833_c0_seq1.path1;Name=comp101833_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=736;mismatches=0;indels=0;unknowns=0;Target=comp101833_c0_seq1 736 1 .;CDS_Target=comp101833_c0_seq1 540 397 .;locus=RLOC_00009012
Chr1	stalkie_big_nohaplotig	exon	75523227	75523962	100	+	.	Parent=comp101833_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	75523623	75523766	.	+	0	Parent=comp101833_c0_seq1.mrna1
Chr1	gffcl	locus	75772586	75772663	.	+	.	ID=RLOC_00009013;geneIDs=comp148830_c1_seq1.path1;transcripts=comp148830_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	75772586	75772663	.	+	.	ID=comp148830_c1_seq1.mrna1;geneID=comp148830_c1_seq1.path1;Name=comp148830_c1_seq1;Dir=indeterminatecoverage=25.7;identity=89.7;matches=70;mismatches=8;indels=0;unknowns=0;Target=comp148830_c1_seq1 79 2 .;locus=RLOC_00009013
Chr1	stalkie_big_nohaplotig	exon	75772586	75772663	89	+	.	Parent=comp148830_c1_seq1.mrna1
Chr1	gffcl	locus	75783036	75784470	.	+	.	ID=RLOC_00009014;geneIDs=comp158825_c1_seq1.path1;transcripts=comp158825_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	75783036	75784470	.	+	.	ID=comp158825_c1_seq1.mrna1;geneID=comp158825_c1_seq1.path1;Name=comp158825_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1418;mismatches=14;indels=3;unknowns=0;Target=comp158825_c1_seq1 1432 1 .;CDS_Target=comp158825_c1_seq1 1432 1208 .;locus=RLOC_00009014
Chr1	stalkie_big_nohaplotig	exon	75783036	75784470	98	+	.	Parent=comp158825_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	75784246	75784470	.	+	0	Parent=comp158825_c1_seq1.mrna1
Chr1	gffcl	locus	76005432	76006316	.	-	.	ID=RLOC_00009017;geneIDs=Dv_FBgn0206941.2.path9;transcripts=Dv_FBgn0206941.2.mrna9
Chr1	stalkie_big_nohaplotig	mRNA	76005432	76006316	.	-	.	ID=Dv_FBgn0206941.2.mrna9;geneID=Dv_FBgn0206941.2.path9;Name=Dv_FBgn0206941.2;Dir=indeterminatecoverage=100.0;identity=99.4;matches=880;mismatches=5;indels=0;unknowns=0;Target=Dv_FBgn0206941.2 885 1 .;locus=RLOC_00009017
Chr1	stalkie_big_nohaplotig	exon	76005432	76006316	99	-	.	Parent=Dv_FBgn0206941.2.mrna9
Chr1	stalkie_big_nohaplotig	CDS	76005432	76006316	.	-	0	Parent=Dv_FBgn0206941.2.mrna9
Chr1	gffcl	locus	76042905	76044113	.	+	.	ID=RLOC_00009018;geneIDs=comp134529_c2_seq1.path1;transcripts=comp134529_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	76042905	76044113	.	+	.	ID=comp134529_c2_seq1.mrna1;geneID=comp134529_c2_seq1.path1;Name=comp134529_c2_seq1;Dir=indeterminatecoverage=99.8;identity=99.3;matches=1200;mismatches=9;indels=0;unknowns=0;Target=comp134529_c2_seq1 1209 1 .;CDS_Target=comp134529_c2_seq1 1207 836 .;locus=RLOC_00009018
Chr1	stalkie_big_nohaplotig	exon	76042905	76044113	99	+	.	Parent=comp134529_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	76043740	76044111	.	+	0	Parent=comp134529_c2_seq1.mrna1
Chr1	gffcl	locus	76333021	76431457	.	-	.	ID=RLOC_00009020;geneIDs=comp162609_c1_seq1.path1;transcripts=comp162609_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	76333021	76431457	.	-	.	ID=comp162609_c1_seq1.mrna1;geneID=comp162609_c1_seq1.path1;Name=comp162609_c1_seq1;Dir=indeterminatecoverage=91.1;identity=94.8;matches=1627;mismatches=60;indels=30;unknowns=0;Target=comp162609_c1_seq1 469 446 .;locus=RLOC_00009020
Chr1	stalkie_big_nohaplotig	exon	76333021	76334600	94	-	.	Parent=comp162609_c1_seq1.mrna1;Target=comp162609_c1_seq1 1831 231 .
Chr1	stalkie_big_nohaplotig	exon	76336448	76336455	100	-	.	Parent=comp162609_c1_seq1.mrna1;Target=comp162609_c1_seq1 230 223 .
Chr1	stalkie_big_nohaplotig	exon	76342239	76342247	100	-	.	Parent=comp162609_c1_seq1.mrna1;Target=comp162609_c1_seq1 222 214 .
Chr1	stalkie_big_nohaplotig	exon	76355490	76355491	100	-	.	Parent=comp162609_c1_seq1.mrna1;Target=comp162609_c1_seq1 213 212 .
Chr1	stalkie_big_nohaplotig	exon	76362631	76362638	100	-	.	Parent=comp162609_c1_seq1.mrna1;Target=comp162609_c1_seq1 211 204 .
Chr1	stalkie_big_nohaplotig	exon	76363896	76363902	100	-	.	Parent=comp162609_c1_seq1.mrna1;Target=comp162609_c1_seq1 203 197 .
Chr1	stalkie_big_nohaplotig	exon	76371521	76371539	89	-	.	Parent=comp162609_c1_seq1.mrna1;Target=comp162609_c1_seq1 196 178 .
Chr1	stalkie_big_nohaplotig	exon	76371905	76371918	92	-	.	Parent=comp162609_c1_seq1.mrna1;Target=comp162609_c1_seq1 163 150 .
Chr1	stalkie_big_nohaplotig	exon	76375465	76375471	85	-	.	Parent=comp162609_c1_seq1.mrna1;Target=comp162609_c1_seq1 149 143 .
Chr1	stalkie_big_nohaplotig	exon	76380477	76380487	81	-	.	Parent=comp162609_c1_seq1.mrna1;Target=comp162609_c1_seq1 142 133 .
Chr1	stalkie_big_nohaplotig	exon	76401266	76401269	100	-	.	Parent=comp162609_c1_seq1.mrna1;Target=comp162609_c1_seq1 132 129 .
Chr1	stalkie_big_nohaplotig	exon	76410204	76410205	100	-	.	Parent=comp162609_c1_seq1.mrna1;Target=comp162609_c1_seq1 128 127 .
Chr1	stalkie_big_nohaplotig	exon	76410368	76410369	100	-	.	Parent=comp162609_c1_seq1.mrna1;Target=comp162609_c1_seq1 126 125 .
Chr1	stalkie_big_nohaplotig	exon	76412690	76412695	100	-	.	Parent=comp162609_c1_seq1.mrna1;Target=comp162609_c1_seq1 124 119 .
Chr1	stalkie_big_nohaplotig	exon	76423673	76423677	100	-	.	Parent=comp162609_c1_seq1.mrna1;Target=comp162609_c1_seq1 117 113 .
Chr1	stalkie_big_nohaplotig	exon	76431450	76431457	100	-	.	Parent=comp162609_c1_seq1.mrna1;Target=comp162609_c1_seq1 112 105 .
Chr1	stalkie_big_nohaplotig	CDS	76334361	76334385	.	-	0	Parent=comp162609_c1_seq1.mrna1
Chr1	gffcl	locus	76390397	76392330	.	+	.	ID=RLOC_00009021;geneIDs=comp145618_c0_seq1.path2;transcripts=comp145618_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	76390397	76392330	.	+	.	ID=comp145618_c0_seq1.mrna2;geneID=comp145618_c0_seq1.path2;Name=comp145618_c0_seq1;Dir=antisensecoverage=90.7;identity=85.4;matches=263;mismatches=19;indels=26;unknowns=0;Target=comp145618_c0_seq1 235 312 .;locus=RLOC_00009021
Chr1	stalkie_big_nohaplotig	exon	76390397	76390600	80	+	.	Parent=comp145618_c0_seq1.mrna2;Target=comp145618_c0_seq1 134 312 -
Chr1	stalkie_big_nohaplotig	exon	76391028	76391081	94	+	.	Parent=comp145618_c0_seq1.mrna2;Target=comp145618_c0_seq1 79 133 -
Chr1	stalkie_big_nohaplotig	exon	76392282	76392330	93	+	.	Parent=comp145618_c0_seq1.mrna2;Target=comp145618_c0_seq1 30 78 -
Chr1	stalkie_big_nohaplotig	CDS	76390397	76390474	.	+	0	Parent=comp145618_c0_seq1.mrna2
Chr1	gffcl	locus	76392960	76393658	.	-	.	ID=RLOC_00009022;geneIDs=Dv_FBgn0209813.1.path9;transcripts=Dv_FBgn0209813.1.mrna9
Chr1	stalkie_big_nohaplotig	mRNA	76392960	76393658	.	-	.	ID=Dv_FBgn0209813.1.mrna9;geneID=Dv_FBgn0209813.1.path9;Name=Dv_FBgn0209813.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=695;mismatches=4;indels=0;unknowns=0;Target=Dv_FBgn0209813.1 699 1 .;locus=RLOC_00009022
Chr1	stalkie_big_nohaplotig	exon	76392960	76393658	99	-	.	Parent=Dv_FBgn0209813.1.mrna9
Chr1	stalkie_big_nohaplotig	CDS	76392960	76393658	.	-	0	Parent=Dv_FBgn0209813.1.mrna9
Chr1	gffcl	locus	76407132	76407545	.	+	.	ID=RLOC_00009023;geneIDs=comp138225_c0_seq1.path1;transcripts=comp138225_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	76407132	76407545	.	+	.	ID=comp138225_c0_seq1.mrna1;geneID=comp138225_c0_seq1.path1;Name=comp138225_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=412;mismatches=2;indels=0;unknowns=0;Target=comp138225_c0_seq1 414 1 .;CDS_Target=comp138225_c0_seq1 230 3 .;locus=RLOC_00009023
Chr1	stalkie_big_nohaplotig	exon	76407132	76407545	99	+	.	Parent=comp138225_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	76407134	76407361	.	+	0	Parent=comp138225_c0_seq1.mrna1
Chr1	gffcl	locus	76408402	76409296	.	-	.	ID=RLOC_00009024;geneIDs=comp157869_c1_seq1.path1;transcripts=comp157869_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	76408402	76409296	.	-	.	ID=comp157869_c1_seq1.mrna1;geneID=comp157869_c1_seq1.path1;Name=comp157869_c1_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=893;mismatches=2;indels=0;unknowns=0;Target=comp157869_c1_seq1 897 3 .;CDS_Target=comp157869_c1_seq1 595 401 .;locus=RLOC_00009024
Chr1	stalkie_big_nohaplotig	exon	76408402	76409296	99	-	.	Parent=comp157869_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	76408704	76408898	.	-	0	Parent=comp157869_c1_seq1.mrna1
Chr1	gffcl	locus	76423928	76424267	.	-	.	ID=RLOC_00009025;geneIDs=FBgn0029943.1.path1;transcripts=FBgn0029943.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	76423928	76424267	.	-	.	ID=FBgn0029943.1.mrna1;geneID=FBgn0029943.1.path1;Name=FBgn0029943.1;Dir=sensecoverage=34.3;identity=100.0;matches=283;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009025
Chr1	stalkie_big_nohaplotig	exon	76423928	76424024	100	-	.	Parent=FBgn0029943.1.mrna1;Target=FBgn0029943.1 187 283 +
Chr1	stalkie_big_nohaplotig	exon	76424082	76424267	100	-	.	Parent=FBgn0029943.1.mrna1;Target=FBgn0029943.1 1 186 +
Chr1	stalkie_big_nohaplotig	CDS	76423928	76424024	.	-	0	Parent=FBgn0029943.1.mrna1;Target=FBgn0029943.1 187 283 +
Chr1	stalkie_big_nohaplotig	CDS	76424082	76424267	.	-	0	Parent=FBgn0029943.1.mrna1;Target=FBgn0029943.1 1 186 +
Chr1	gffcl	locus	76501636	76502321	.	+	.	ID=RLOC_00009027;geneIDs=FBgn0002579.1.path1;transcripts=FBgn0002579.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	76501636	76502321	.	+	.	ID=FBgn0002579.1.mrna1;geneID=FBgn0002579.1.path1;Name=FBgn0002579.1;Dir=sensecoverage=100.0;identity=99.6;matches=469;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009027
Chr1	stalkie_big_nohaplotig	exon	76501636	76501756	100	+	.	Parent=FBgn0002579.1.mrna1;Target=FBgn0002579.1 1 121 +
Chr1	stalkie_big_nohaplotig	exon	76501893	76502020	100	+	.	Parent=FBgn0002579.1.mrna1;Target=FBgn0002579.1 122 249 +
Chr1	stalkie_big_nohaplotig	exon	76502100	76502321	99	+	.	Parent=FBgn0002579.1.mrna1;Target=FBgn0002579.1 250 471 +
Chr1	stalkie_big_nohaplotig	CDS	76501636	76501756	.	+	0	Parent=FBgn0002579.1.mrna1;Target=FBgn0002579.1 1 121 +
Chr1	stalkie_big_nohaplotig	CDS	76501893	76502020	.	+	2	Parent=FBgn0002579.1.mrna1;Target=FBgn0002579.1 122 249 +
Chr1	stalkie_big_nohaplotig	CDS	76502100	76502321	.	+	0	Parent=FBgn0002579.1.mrna1;Target=FBgn0002579.1 250 471 +
Chr1	gffcl	locus	76502355	76502767	.	-	.	ID=RLOC_00009028;geneIDs=comp119031_c0_seq1.path1;transcripts=comp119031_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	76502355	76502767	.	-	.	ID=comp119031_c0_seq1.mrna1;geneID=comp119031_c0_seq1.path1;Name=comp119031_c0_seq1;Dir=indeterminatecoverage=95.6;identity=99.3;matches=410;mismatches=3;indels=0;unknowns=0;Target=comp119031_c0_seq1 432 20 .;CDS_Target=comp119031_c0_seq1 83 21 .;locus=RLOC_00009028
Chr1	stalkie_big_nohaplotig	exon	76502355	76502767	99	-	.	Parent=comp119031_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	76502704	76502766	.	-	0	Parent=comp119031_c0_seq1.mrna1
Chr1	gffcl	locus	76513654	76513744	.	-	.	ID=RLOC_00009029;geneIDs=comp162625_c4_seq1.path1;transcripts=comp162625_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	76513654	76513744	.	-	.	ID=comp162625_c4_seq1.mrna1;geneID=comp162625_c4_seq1.path1;Name=comp162625_c4_seq1;Dir=indeterminatecoverage=5.7;identity=96.7;matches=88;mismatches=3;indels=0;unknowns=0;Target=comp162625_c4_seq1 91 1 .;locus=RLOC_00009029
Chr1	stalkie_big_nohaplotig	exon	76513654	76513744	96	-	.	Parent=comp162625_c4_seq1.mrna1
Chr1	gffcl	locus	76517201	76520069	.	+	.	ID=RLOC_00009030;geneIDs=comp163787_c0_seq1.path1;transcripts=comp163787_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	76517201	76520069	.	+	.	ID=comp163787_c0_seq1.mrna1;geneID=comp163787_c0_seq1.path1;Name=comp163787_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.6;matches=2811;mismatches=57;indels=41;unknowns=0;Target=comp163787_c0_seq1 2908 1 .;CDS_Target=comp163787_c0_seq1 2832 2341 .;locus=RLOC_00009030
Chr1	stalkie_big_nohaplotig	exon	76517201	76520069	96	+	.	Parent=comp163787_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	76519501	76519992	.	+	0	Parent=comp163787_c0_seq1.mrna1
Chr1	gffcl	locus	76574682	76575821	.	-	.	ID=RLOC_00009031;geneIDs=ORF1322.path1;transcripts=ORF1322.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	76574682	76575821	.	-	.	ID=ORF1322.mrna1;geneID=ORF1322.path1;Name=ORF1322;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1136;mismatches=4;indels=0;unknowns=0;Target=ORF1322 1140 1 .;locus=RLOC_00009031
Chr1	stalkie_big_nohaplotig	exon	76574682	76575821	99	-	.	Parent=ORF1322.mrna1
Chr1	stalkie_big_nohaplotig	CDS	76574682	76575821	.	-	0	Parent=ORF1322.mrna1
Chr1	gffcl	locus	76608804	76609000	.	-	.	ID=RLOC_00009033;geneIDs=comp144716_c1_seq1.path1;transcripts=comp144716_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	76608804	76609000	.	-	.	ID=comp144716_c1_seq1.mrna1;geneID=comp144716_c1_seq1.path1;Name=comp144716_c1_seq1;Dir=indeterminatecoverage=30.6;identity=97.0;matches=191;mismatches=6;indels=0;unknowns=0;Target=comp144716_c1_seq1 197 1 .;CDS_Target=comp144716_c1_seq1 197 3 .;locus=RLOC_00009033
Chr1	stalkie_big_nohaplotig	exon	76608804	76609000	96	-	.	Parent=comp144716_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	76608804	76608998	.	-	0	Parent=comp144716_c1_seq1.mrna1
Chr1	gffcl	locus	76659444	76661114	.	+	.	ID=RLOC_00009034;geneIDs=comp160425_c6_seq1.path2;transcripts=comp160425_c6_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	76659444	76661114	.	+	.	ID=comp160425_c6_seq1.mrna2;geneID=comp160425_c6_seq1.path2;Name=comp160425_c6_seq1;Dir=indeterminatecoverage=16.6;identity=92.1;matches=398;mismatches=25;indels=9;unknowns=0;locus=RLOC_00009034
Chr1	stalkie_big_nohaplotig	exon	76659444	76659659	86	+	.	Parent=comp160425_c6_seq1.mrna2;Target=comp160425_c6_seq1 2364 2150 .
Chr1	stalkie_big_nohaplotig	exon	76660903	76661114	97	+	.	Parent=comp160425_c6_seq1.mrna2;Target=comp160425_c6_seq1 2576 2365 .
Chr1	stalkie_big_nohaplotig	CDS	76659608	76659659	.	+	2	Parent=comp160425_c6_seq1.mrna2;Target=comp160425_c6_seq1 2364 2313 .
Chr1	stalkie_big_nohaplotig	CDS	76660903	76661114	.	+	1	Parent=comp160425_c6_seq1.mrna2;Target=comp160425_c6_seq1 2576 2365 .
Chr1	gffcl	locus	76659612	76661114	.	-	.	ID=RLOC_00009035;geneIDs=Dp_FBgn0245446.path1;transcripts=Dp_FBgn0245446.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	76659612	76661114	.	-	.	ID=Dp_FBgn0245446.mrna1;geneID=Dp_FBgn0245446.path1;Name=Dp_FBgn0245446;Dir=indeterminatecoverage=99.6;identity=96.5;matches=251;mismatches=9;indels=0;unknowns=0;locus=RLOC_00009035
Chr1	stalkie_big_nohaplotig	exon	76659612	76659659	91	-	.	Parent=Dp_FBgn0245446.mrna1;Target=Dp_FBgn0245446 260 213 .
Chr1	stalkie_big_nohaplotig	exon	76660903	76661114	97	-	.	Parent=Dp_FBgn0245446.mrna1;Target=Dp_FBgn0245446 212 1 .
Chr1	stalkie_big_nohaplotig	CDS	76659614	76659659	.	-	1	Parent=Dp_FBgn0245446.mrna1;Target=Dp_FBgn0245446 258 213 .
Chr1	stalkie_big_nohaplotig	CDS	76660903	76661114	.	-	0	Parent=Dp_FBgn0245446.mrna1;Target=Dp_FBgn0245446 212 1 .
Chr1	gffcl	locus	76662488	76884807	.	-	.	ID=RLOC_00009036;geneIDs=comp163903_c0_seq1.path1;transcripts=comp163903_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	76662488	76884807	.	-	.	ID=comp163903_c0_seq1.mrna1;geneID=comp163903_c0_seq1.path1;Name=comp163903_c0_seq1;Dir=indeterminatecoverage=71.2;identity=97.4;matches=3896;mismatches=61;indels=43;unknowns=0;Target=comp163903_c0_seq1 2665 1427 .;locus=RLOC_00009036
Chr1	stalkie_big_nohaplotig	exon	76662488	76662496	100	-	.	Parent=comp163903_c0_seq1.mrna1;Target=comp163903_c0_seq1 4362 4354 .
Chr1	stalkie_big_nohaplotig	exon	76662525	76662533	100	-	.	Parent=comp163903_c0_seq1.mrna1;Target=comp163903_c0_seq1 4327 4319 .
Chr1	stalkie_big_nohaplotig	exon	76676517	76676519	100	-	.	Parent=comp163903_c0_seq1.mrna1;Target=comp163903_c0_seq1 4318 4316 .
Chr1	stalkie_big_nohaplotig	exon	76880872	76884807	97	-	.	Parent=comp163903_c0_seq1.mrna1;Target=comp163903_c0_seq1 4315 337 .
Chr1	stalkie_big_nohaplotig	CDS	76882486	76883723	.	-	0	Parent=comp163903_c0_seq1.mrna1
Chr1	gffcl	locus	76705178	76706178	.	-	.	ID=RLOC_00009038;geneIDs=comp160515_c0_seq1.path1;transcripts=comp160515_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	76705178	76706178	.	-	.	ID=comp160515_c0_seq1.mrna1;geneID=comp160515_c0_seq1.path1;Name=comp160515_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.7;matches=999;mismatches=2;indels=1;unknowns=0;Target=comp160515_c0_seq1 1002 1 .;CDS_Target=comp160515_c0_seq1 128 3 .;locus=RLOC_00009038
Chr1	stalkie_big_nohaplotig	exon	76705178	76706178	99	-	.	Parent=comp160515_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	76706051	76706176	.	-	0	Parent=comp160515_c0_seq1.mrna1
Chr1	gffcl	locus	76708505	76772157	.	-	.	ID=RLOC_00009039;geneIDs=FBgn0029693.1.path1,comp156836_c2_seq1.path1;transcripts=comp156836_c2_seq1.mrna1,FBgn0029693.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	76708505	76772157	.	-	.	ID=comp156836_c2_seq1.mrna1;geneID=comp156836_c2_seq1.path1;Name=comp156836_c2_seq1;Dir=sensecoverage=99.9;identity=99.8;matches=3135;mismatches=4;indels=1;unknowns=0;locus=RLOC_00009039
Chr1	stalkie_big_nohaplotig	exon	76708505	76710699	99	-	.	Parent=comp156836_c2_seq1.mrna1;Target=comp156836_c2_seq1 946 3140 +
Chr1	stalkie_big_nohaplotig	exon	76771213	76772157	99	-	.	Parent=comp156836_c2_seq1.mrna1;Target=comp156836_c2_seq1 2 945 +
Chr1	stalkie_big_nohaplotig	CDS	76708991	76710699	.	-	2	Parent=comp156836_c2_seq1.mrna1;Target=comp156836_c2_seq1 946 2654 +
Chr1	stalkie_big_nohaplotig	CDS	76771213	76771261	.	-	0	Parent=comp156836_c2_seq1.mrna1;Target=comp156836_c2_seq1 897 945 +
Chr1	stalkie_big_nohaplotig	mRNA	76708994	76771907	.	-	.	ID=FBgn0029693.1.mrna1;geneID=FBgn0029693.1.path1;Name=FBgn0029693.1;Dir=sensecoverage=100.0;identity=99.9;matches=2382;mismatches=3;indels=0;unknowns=0;locus=RLOC_00009039
Chr1	stalkie_big_nohaplotig	exon	76708994	76710699	99	-	.	Parent=FBgn0029693.1.mrna1;Target=FBgn0029693.1 680 2385 +
Chr1	stalkie_big_nohaplotig	exon	76771229	76771907	100	-	.	Parent=FBgn0029693.1.mrna1;Target=FBgn0029693.1 1 679 +
Chr1	stalkie_big_nohaplotig	CDS	76708994	76710699	.	-	2	Parent=FBgn0029693.1.mrna1;Target=FBgn0029693.1 680 2385 +
Chr1	stalkie_big_nohaplotig	CDS	76771229	76771907	.	-	0	Parent=FBgn0029693.1.mrna1;Target=FBgn0029693.1 1 679 +
Chr1	gffcl	locus	76805802	76808896	.	+	.	ID=RLOC_00009040;geneIDs=comp160522_c2_seq1.path1;transcripts=comp160522_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	76805802	76808896	.	+	.	ID=comp160522_c2_seq1.mrna1;geneID=comp160522_c2_seq1.path1;Name=comp160522_c2_seq1;Dir=sensecoverage=91.6;identity=85.7;matches=2362;mismatches=218;indels=177;unknowns=0;Target=comp160522_c2_seq1 2280 2627 +;locus=RLOC_00009040
Chr1	stalkie_big_nohaplotig	exon	76805802	76806160	77	+	.	Parent=comp160522_c2_seq1.mrna1;Target=comp160522_c2_seq1 245 656 +
Chr1	stalkie_big_nohaplotig	exon	76806511	76806548	76	+	.	Parent=comp160522_c2_seq1.mrna1;Target=comp160522_c2_seq1 657 686 +
Chr1	stalkie_big_nohaplotig	exon	76806628	76808896	87	+	.	Parent=comp160522_c2_seq1.mrna1;Target=comp160522_c2_seq1 687 2915 +
Chr1	stalkie_big_nohaplotig	CDS	76808210	76808598	.	+	0	Parent=comp160522_c2_seq1.mrna1
Chr1	gffcl	locus	76917677	76917808	.	-	.	ID=RLOC_00009044;geneIDs=FBgn0026873.1.path1;transcripts=FBgn0026873.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	76917677	76917808	.	-	.	ID=FBgn0026873.1.mrna1;geneID=FBgn0026873.1.path1;Name=FBgn0026873.1;Dir=indeterminatecoverage=19.9;identity=100.0;matches=132;mismatches=0;indels=0;unknowns=0;Target=FBgn0026873.1 140 9 .;CDS_Target=FBgn0026873.1 140 10 .;locus=RLOC_00009044
Chr1	stalkie_big_nohaplotig	exon	76917677	76917808	100	-	.	Parent=FBgn0026873.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	76917677	76917807	.	-	0	Parent=FBgn0026873.1.mrna1
Chr1	gffcl	locus	77030640	77032693	.	-	.	ID=RLOC_00009046;geneIDs=FBgn0026873.1.path2,comp152581_c1_seq1.path1;transcripts=FBgn0026873.1.mrna2,comp152581_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	77030640	77031215	.	-	.	ID=FBgn0026873.1.mrna2;geneID=FBgn0026873.1.path2;Name=FBgn0026873.1;Dir=sensecoverage=78.9;identity=100.0;matches=523;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009046
Chr1	stalkie_big_nohaplotig	exon	77030640	77030878	100	-	.	Parent=FBgn0026873.1.mrna2;Target=FBgn0026873.1 425 663 +
Chr1	stalkie_big_nohaplotig	exon	77030932	77031215	100	-	.	Parent=FBgn0026873.1.mrna2;Target=FBgn0026873.1 141 424 +
Chr1	stalkie_big_nohaplotig	CDS	77030640	77030878	.	-	0	Parent=FBgn0026873.1.mrna2;Target=FBgn0026873.1 425 663 +
Chr1	stalkie_big_nohaplotig	CDS	77030932	77031215	.	-	2	Parent=FBgn0026873.1.mrna2;Target=FBgn0026873.1 141 424 +
Chr1	stalkie_big_nohaplotig	mRNA	77031194	77032693	.	-	.	ID=comp152581_c1_seq1.mrna1;geneID=comp152581_c1_seq1.path1;Name=comp152581_c1_seq1;Dir=antisensecoverage=70.2;identity=99.0;matches=673;mismatches=7;indels=0;unknowns=0;Target=comp152581_c1_seq1 556 678 .;locus=RLOC_00009046
Chr1	stalkie_big_nohaplotig	exon	77031194	77031215	100	-	.	Parent=comp152581_c1_seq1.mrna1;Target=comp152581_c1_seq1 1 22 -
Chr1	stalkie_big_nohaplotig	exon	77032036	77032693	98	-	.	Parent=comp152581_c1_seq1.mrna1;Target=comp152581_c1_seq1 23 680 -
Chr1	stalkie_big_nohaplotig	CDS	77032569	77032691	.	-	0	Parent=comp152581_c1_seq1.mrna1
Chr1	gffcl	locus	77033306	77033958	.	-	.	ID=RLOC_00009047;geneIDs=comp67790_c0_seq1.path1;transcripts=comp67790_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	77033306	77033958	.	-	.	ID=comp67790_c0_seq1.mrna1;geneID=comp67790_c0_seq1.path1;Name=comp67790_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=652;mismatches=1;indels=0;unknowns=0;Target=comp67790_c0_seq1 653 1 .;CDS_Target=comp67790_c0_seq1 353 159 .;locus=RLOC_00009047
Chr1	stalkie_big_nohaplotig	exon	77033306	77033958	99	-	.	Parent=comp67790_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	77033606	77033800	.	-	0	Parent=comp67790_c0_seq1.mrna1
Chr1	gffcl	locus	77134432	77135514	.	+	.	ID=RLOC_00009048;geneIDs=FBgn0031305.2.path1;transcripts=FBgn0031305.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	77134432	77135514	.	+	.	ID=FBgn0031305.2.mrna1;geneID=FBgn0031305.2.path1;Name=FBgn0031305.2;Dir=indeterminatecoverage=100.0;identity=96.5;matches=1045;mismatches=38;indels=0;unknowns=0;Target=FBgn0031305.2 1083 1 .;locus=RLOC_00009048
Chr1	stalkie_big_nohaplotig	exon	77134432	77135514	96	+	.	Parent=FBgn0031305.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	77134432	77135514	.	+	0	Parent=FBgn0031305.2.mrna1
Chr1	gffcl	locus	77164476	77684110	.	+	.	ID=RLOC_00009049;geneIDs=comp157241_c4_seq1.path1;transcripts=comp157241_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	77164476	77684110	.	+	.	ID=comp157241_c4_seq1.mrna1;geneID=comp157241_c4_seq1.path1;Name=comp157241_c4_seq1;Dir=indeterminatecoverage=74.1;identity=86.8;matches=773;mismatches=45;indels=73;unknowns=0;Target=comp157241_c4_seq1 689 525 .;locus=RLOC_00009049
Chr1	stalkie_big_nohaplotig	exon	77164476	77164489	71	+	.	Parent=comp157241_c4_seq1.mrna1;Target=comp157241_c4_seq1 315 302 .
Chr1	stalkie_big_nohaplotig	exon	77170925	77170970	30	+	.	Parent=comp157241_c4_seq1.mrna1;Target=comp157241_c4_seq1 329 316 .
Chr1	stalkie_big_nohaplotig	exon	77184713	77184757	53	+	.	Parent=comp157241_c4_seq1.mrna1;Target=comp157241_c4_seq1 385 330 .
Chr1	stalkie_big_nohaplotig	exon	77197590	77197600	100	+	.	Parent=comp157241_c4_seq1.mrna1;Target=comp157241_c4_seq1 396 386 .
Chr1	stalkie_big_nohaplotig	exon	77205597	77205598	100	+	.	Parent=comp157241_c4_seq1.mrna1;Target=comp157241_c4_seq1 407 406 .
Chr1	stalkie_big_nohaplotig	exon	77215699	77215711	76	+	.	Parent=comp157241_c4_seq1.mrna1;Target=comp157241_c4_seq1 420 408 .
Chr1	stalkie_big_nohaplotig	exon	77215881	77215886	100	+	.	Parent=comp157241_c4_seq1.mrna1;Target=comp157241_c4_seq1 426 421 .
Chr1	stalkie_big_nohaplotig	exon	77216078	77216084	100	+	.	Parent=comp157241_c4_seq1.mrna1;Target=comp157241_c4_seq1 433 427 .
Chr1	stalkie_big_nohaplotig	exon	77219103	77219136	53	+	.	Parent=comp157241_c4_seq1.mrna1;Target=comp157241_c4_seq1 472 434 .
Chr1	stalkie_big_nohaplotig	exon	77228385	77228389	100	+	.	Parent=comp157241_c4_seq1.mrna1;Target=comp157241_c4_seq1 477 473 .
Chr1	stalkie_big_nohaplotig	exon	77235841	77235864	57	+	.	Parent=comp157241_c4_seq1.mrna1;Target=comp157241_c4_seq1 512 478 .
Chr1	stalkie_big_nohaplotig	exon	77243245	77243247	100	+	.	Parent=comp157241_c4_seq1.mrna1;Target=comp157241_c4_seq1 515 513 .
Chr1	stalkie_big_nohaplotig	exon	77245264	77245270	100	+	.	Parent=comp157241_c4_seq1.mrna1;Target=comp157241_c4_seq1 522 516 .
Chr1	stalkie_big_nohaplotig	exon	77683473	77684110	96	+	.	Parent=comp157241_c4_seq1.mrna1;Target=comp157241_c4_seq1 1162 523 .
Chr1	stalkie_big_nohaplotig	CDS	77683475	77683637	.	+	0	Parent=comp157241_c4_seq1.mrna1
Chr1	gffcl	locus	77198955	77199848	.	+	.	ID=RLOC_00009050;geneIDs=comp161565_c0_seq1.path1;transcripts=comp161565_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	77198955	77199848	.	+	.	ID=comp161565_c0_seq1.mrna1;geneID=comp161565_c0_seq1.path1;Name=comp161565_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=618;mismatches=13;indels=0;unknowns=0;Target=comp161565_c0_seq1 272 3 .;locus=RLOC_00009050
Chr1	stalkie_big_nohaplotig	exon	77198955	77199369	97	+	.	Parent=comp161565_c0_seq1.mrna1;Target=comp161565_c0_seq1 415 1 .
Chr1	stalkie_big_nohaplotig	exon	77199633	77199848	98	+	.	Parent=comp161565_c0_seq1.mrna1;Target=comp161565_c0_seq1 631 416 .
Chr1	stalkie_big_nohaplotig	CDS	77198957	77199226	.	+	0	Parent=comp161565_c0_seq1.mrna1
Chr1	gffcl	locus	77317048	77317365	.	+	.	ID=RLOC_00009051;geneIDs=Dp_FBgn0250085.path1;transcripts=Dp_FBgn0250085.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	77317048	77317365	.	+	.	ID=Dp_FBgn0250085.mrna1;geneID=Dp_FBgn0250085.path1;Name=Dp_FBgn0250085;Dir=indeterminatecoverage=100.0;identity=100.0;matches=318;mismatches=0;indels=0;unknowns=0;Target=Dp_FBgn0250085 318 1 .;locus=RLOC_00009051
Chr1	stalkie_big_nohaplotig	exon	77317048	77317365	100	+	.	Parent=Dp_FBgn0250085.mrna1
Chr1	stalkie_big_nohaplotig	CDS	77317048	77317365	.	+	0	Parent=Dp_FBgn0250085.mrna1
Chr1	gffcl	locus	77327262	77337282	.	+	.	ID=RLOC_00009052;geneIDs=FBgn0263987.1.path1;transcripts=FBgn0263987.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	77327262	77337282	.	+	.	ID=FBgn0263987.1.mrna1;geneID=FBgn0263987.1.path1;Name=FBgn0263987.1;Dir=sensecoverage=100.0;identity=99.9;matches=1592;mismatches=0;indels=1;unknowns=0;Target=FBgn0263987.1 3 17 +;locus=RLOC_00009052
Chr1	stalkie_big_nohaplotig	exon	77327262	77328262	99	+	.	Parent=FBgn0263987.1.mrna1;Target=FBgn0263987.1 1 1002 +
Chr1	stalkie_big_nohaplotig	exon	77328318	77328708	100	+	.	Parent=FBgn0263987.1.mrna1;Target=FBgn0263987.1 1003 1393 +
Chr1	stalkie_big_nohaplotig	exon	77328762	77328895	100	+	.	Parent=FBgn0263987.1.mrna1;Target=FBgn0263987.1 1394 1527 +
Chr1	stalkie_big_nohaplotig	exon	77337217	77337282	100	+	.	Parent=FBgn0263987.1.mrna1;Target=FBgn0263987.1 1528 1593 +
Chr1	stalkie_big_nohaplotig	CDS	77327264	77327277	.	+	0	Parent=FBgn0263987.1.mrna1
Chr1	gffcl	locus	77376592	77378528	.	+	.	ID=RLOC_00009053;geneIDs=comp163184_c7_seq1.path1;transcripts=comp163184_c7_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	77376592	77378528	.	+	.	ID=comp163184_c7_seq1.mrna1;geneID=comp163184_c7_seq1.path1;Name=comp163184_c7_seq1;Dir=indeterminatecoverage=63.1;identity=99.6;matches=1931;mismatches=6;indels=1;unknowns=0;Target=comp163184_c7_seq1 1938 1 .;CDS_Target=comp163184_c7_seq1 1938 1809 .;locus=RLOC_00009053
Chr1	stalkie_big_nohaplotig	exon	77376592	77378528	99	+	.	Parent=comp163184_c7_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	77378399	77378528	.	+	0	Parent=comp163184_c7_seq1.mrna1
Chr1	gffcl	locus	77384378	77384583	.	+	.	ID=RLOC_00009054;geneIDs=comp143454_c0_seq1.path1;transcripts=comp143454_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	77384378	77384583	.	+	.	ID=comp143454_c0_seq1.mrna1;geneID=comp143454_c0_seq1.path1;Name=comp143454_c0_seq1;Dir=indeterminatecoverage=30.6;identity=100.0;matches=206;mismatches=0;indels=0;unknowns=0;Target=comp143454_c0_seq1 206 1 .;locus=RLOC_00009054
Chr1	stalkie_big_nohaplotig	exon	77384378	77384583	100	+	.	Parent=comp143454_c0_seq1.mrna1
Chr1	gffcl	locus	77453771	77455581	.	-	.	ID=RLOC_00009056;geneIDs=Dp_FBgn0243606.path3;transcripts=Dp_FBgn0243606.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	77453771	77455581	.	-	.	ID=Dp_FBgn0243606.mrna3;geneID=Dp_FBgn0243606.path3;Name=Dp_FBgn0243606;Dir=indeterminatecoverage=98.8;identity=97.7;matches=1778;mismatches=33;indels=9;unknowns=0;Target=Dp_FBgn0243606 1820 1 .;CDS_Target=Dp_FBgn0243606 1818 1 .;locus=RLOC_00009056
Chr1	stalkie_big_nohaplotig	exon	77453771	77455581	97	-	.	Parent=Dp_FBgn0243606.mrna3
Chr1	stalkie_big_nohaplotig	CDS	77453773	77455581	.	-	0	Parent=Dp_FBgn0243606.mrna3
Chr1	gffcl	locus	77474837	77475732	.	-	.	ID=RLOC_00009058;geneIDs=comp156341_c0_seq1.path1;transcripts=comp156341_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	77474837	77475732	.	-	.	ID=comp156341_c0_seq1.mrna1;geneID=comp156341_c0_seq1.path1;Name=comp156341_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=886;mismatches=10;indels=0;unknowns=0;Target=comp156341_c0_seq1 896 1 .;CDS_Target=comp156341_c0_seq1 810 610 .;locus=RLOC_00009058
Chr1	stalkie_big_nohaplotig	exon	77474837	77475732	98	-	.	Parent=comp156341_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	77474923	77475123	.	-	0	Parent=comp156341_c0_seq1.mrna1
Chr1	gffcl	locus	77495189	77497289	.	-	.	ID=RLOC_00009059;geneIDs=comp159089_c7_seq1.path1;transcripts=comp159089_c7_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	77495189	77497289	.	-	.	ID=comp159089_c7_seq1.mrna1;geneID=comp159089_c7_seq1.path1;Name=comp159089_c7_seq1;Dir=sensecoverage=95.7;identity=91.4;matches=1805;mismatches=120;indels=49;unknowns=0;locus=RLOC_00009059
Chr1	stalkie_big_nohaplotig	exon	77495189	77495875	92	-	.	Parent=comp159089_c7_seq1.mrna1;Target=comp159089_c7_seq1 1324 2020 +
Chr1	stalkie_big_nohaplotig	exon	77495971	77496338	82	-	.	Parent=comp159089_c7_seq1.mrna1;Target=comp159089_c7_seq1 968 1323 +
Chr1	stalkie_big_nohaplotig	exon	77496401	77497289	94	-	.	Parent=comp159089_c7_seq1.mrna1;Target=comp159089_c7_seq1 66 967 +
Chr1	stalkie_big_nohaplotig	CDS	77495298	77495875	.	-	2	Parent=comp159089_c7_seq1.mrna1;Target=comp159089_c7_seq1 1324 1907 +
Chr1	stalkie_big_nohaplotig	CDS	77495971	77496338	.	-	1	Parent=comp159089_c7_seq1.mrna1;Target=comp159089_c7_seq1 968 1323 +
Chr1	stalkie_big_nohaplotig	CDS	77496401	77496708	.	-	0	Parent=comp159089_c7_seq1.mrna1;Target=comp159089_c7_seq1 660 967 +
Chr1	gffcl	locus	77540560	77615560	.	-	.	ID=RLOC_00009060;geneIDs=FBgn0023458.1.path1,comp147506_c0_seq1.path1,comp162075_c0_seq1.path1;transcripts=FBgn0023458.1.mrna1,comp162075_c0_seq1.mrna1,comp147506_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	77540560	77615560	.	-	.	ID=FBgn0023458.1.mrna1;geneID=FBgn0023458.1.path1;Name=FBgn0023458.1;Dir=sensecoverage=87.3;identity=100.0;matches=8474;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009060
Chr1	stalkie_big_nohaplotig	exon	77540560	77540824	100	-	.	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 8534 8798 +
Chr1	stalkie_big_nohaplotig	exon	77540885	77541115	100	-	.	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 8303 8533 +
Chr1	stalkie_big_nohaplotig	exon	77552989	77553105	100	-	.	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 8186 8302 +
Chr1	stalkie_big_nohaplotig	exon	77553177	77553398	100	-	.	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 7964 8185 +
Chr1	stalkie_big_nohaplotig	exon	77553474	77554269	100	-	.	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 7168 7963 +
Chr1	stalkie_big_nohaplotig	exon	77554333	77554565	100	-	.	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 6935 7167 +
Chr1	stalkie_big_nohaplotig	exon	77584741	77584867	100	-	.	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 6808 6934 +
Chr1	stalkie_big_nohaplotig	exon	77584944	77587022	100	-	.	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 4729 6807 +
Chr1	stalkie_big_nohaplotig	exon	77610991	77611077	100	-	.	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 4642 4728 +
Chr1	stalkie_big_nohaplotig	exon	77611129	77615090	99	-	.	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 680 4641 +
Chr1	stalkie_big_nohaplotig	exon	77615155	77615364	100	-	.	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 470 679 +
Chr1	stalkie_big_nohaplotig	exon	77615415	77615560	100	-	.	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 324 469 +
Chr1	stalkie_big_nohaplotig	CDS	77540562	77540824	.	-	2	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 8534 8796 +
Chr1	stalkie_big_nohaplotig	CDS	77540885	77541115	.	-	2	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 8303 8533 +
Chr1	stalkie_big_nohaplotig	CDS	77552989	77553105	.	-	2	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 8186 8302 +
Chr1	stalkie_big_nohaplotig	CDS	77553177	77553398	.	-	2	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 7964 8185 +
Chr1	stalkie_big_nohaplotig	CDS	77553474	77554269	.	-	0	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 7168 7963 +
Chr1	stalkie_big_nohaplotig	CDS	77554333	77554565	.	-	2	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 6935 7167 +
Chr1	stalkie_big_nohaplotig	CDS	77584741	77584867	.	-	0	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 6808 6934 +
Chr1	stalkie_big_nohaplotig	CDS	77584944	77587022	.	-	0	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 4729 6807 +
Chr1	stalkie_big_nohaplotig	CDS	77610991	77611077	.	-	0	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 4642 4728 +
Chr1	stalkie_big_nohaplotig	CDS	77611129	77615090	.	-	2	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 680 4641 +
Chr1	stalkie_big_nohaplotig	CDS	77615155	77615364	.	-	2	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 470 679 +
Chr1	stalkie_big_nohaplotig	CDS	77615415	77615559	.	-	0	Parent=FBgn0023458.1.mrna1;Target=FBgn0023458.1 325 469 +
Chr1	stalkie_big_nohaplotig	mRNA	77541092	77543469	.	-	.	ID=comp162075_c0_seq1.mrna1;geneID=comp162075_c0_seq1.path1;Name=comp162075_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=1954;mismatches=0;indels=2;unknowns=0;Target=comp162075_c0_seq1 1533 1841 .;locus=RLOC_00009060
Chr1	stalkie_big_nohaplotig	exon	77541092	77541115	100	-	.	Parent=comp162075_c0_seq1.mrna1;Target=comp162075_c0_seq1 1 24 -
Chr1	stalkie_big_nohaplotig	exon	77541540	77543469	99	-	.	Parent=comp162075_c0_seq1.mrna1;Target=comp162075_c0_seq1 25 1956 -
Chr1	stalkie_big_nohaplotig	CDS	77543047	77543355	.	-	0	Parent=comp162075_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	77552189	77553011	.	-	.	ID=comp147506_c0_seq1.mrna1;geneID=comp147506_c0_seq1.path1;Name=comp147506_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=815;mismatches=8;indels=0;unknowns=0;Target=comp147506_c0_seq1 823 1 .;CDS_Target=comp147506_c0_seq1 716 648 .;locus=RLOC_00009060
Chr1	stalkie_big_nohaplotig	exon	77552189	77553011	99	-	.	Parent=comp147506_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	77552296	77552364	.	-	0	Parent=comp147506_c0_seq1.mrna1
Chr1	gffcl	locus	77545928	77546223	.	+	.	ID=RLOC_00009061;geneIDs=comp148273_c0_seq1.path1;transcripts=comp148273_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	77545928	77546223	.	+	.	ID=comp148273_c0_seq1.mrna1;geneID=comp148273_c0_seq1.path1;Name=comp148273_c0_seq1;Dir=indeterminatecoverage=21.3;identity=100.0;matches=296;mismatches=0;indels=0;unknowns=0;Target=comp148273_c0_seq1 296 1 .;CDS_Target=comp148273_c0_seq1 250 2 .;locus=RLOC_00009061
Chr1	stalkie_big_nohaplotig	exon	77545928	77546223	100	+	.	Parent=comp148273_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	77545929	77546177	.	+	0	Parent=comp148273_c0_seq1.mrna1
Chr1	gffcl	locus	77551818	77552133	.	-	.	ID=RLOC_00009062;geneIDs=comp144763_c0_seq1.path1;transcripts=comp144763_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	77551818	77552133	.	-	.	ID=comp144763_c0_seq1.mrna1;geneID=comp144763_c0_seq1.path1;Name=comp144763_c0_seq1;Dir=indeterminatecoverage=95.5;identity=100.0;matches=316;mismatches=0;indels=0;unknowns=0;Target=comp144763_c0_seq1 331 16 .;CDS_Target=comp144763_c0_seq1 156 16 .;locus=RLOC_00009062
Chr1	stalkie_big_nohaplotig	exon	77551818	77552133	100	-	.	Parent=comp144763_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	77551993	77552133	.	-	0	Parent=comp144763_c0_seq1.mrna1
Chr1	gffcl	locus	77588315	77590694	.	-	.	ID=RLOC_00009063;geneIDs=comp163350_c2_seq1.path1;transcripts=comp163350_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	77588315	77590694	.	-	.	ID=comp163350_c2_seq1.mrna1;geneID=comp163350_c2_seq1.path1;Name=comp163350_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=2365;mismatches=15;indels=0;unknowns=0;Target=comp163350_c2_seq1 2380 1 .;CDS_Target=comp163350_c2_seq1 2378 3 .;locus=RLOC_00009063
Chr1	stalkie_big_nohaplotig	exon	77588315	77590694	99	-	.	Parent=comp163350_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	77588317	77590692	.	-	0	Parent=comp163350_c2_seq1.mrna1
Chr1	gffcl	locus	77705674	77707145	.	-	.	ID=RLOC_00009065;geneIDs=comp161959_c1_seq1.path1;transcripts=comp161959_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	77705674	77707145	.	-	.	ID=comp161959_c1_seq1.mrna1;geneID=comp161959_c1_seq1.path1;Name=comp161959_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1467;mismatches=5;indels=0;unknowns=0;Target=comp161959_c1_seq1 1472 1 .;CDS_Target=comp161959_c1_seq1 1265 453 .;locus=RLOC_00009065
Chr1	stalkie_big_nohaplotig	exon	77705674	77707145	99	-	.	Parent=comp161959_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	77705881	77706693	.	-	0	Parent=comp161959_c1_seq1.mrna1
Chr1	gffcl	locus	77771457	77771901	.	-	.	ID=RLOC_00009067;geneIDs=comp160973_c0_seq1.path1;transcripts=comp160973_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	77771457	77771901	.	-	.	ID=comp160973_c0_seq1.mrna1;geneID=comp160973_c0_seq1.path1;Name=comp160973_c0_seq1;Dir=indeterminatecoverage=97.8;identity=94.2;matches=420;mismatches=16;indels=10;unknowns=0;Target=comp160973_c0_seq1 447 11 .;CDS_Target=comp160973_c0_seq1 111 13 .;locus=RLOC_00009067
Chr1	stalkie_big_nohaplotig	exon	77771457	77771901	94	-	.	Parent=comp160973_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	77771793	77771899	.	-	0	Parent=comp160973_c0_seq1.mrna1
Chr1	gffcl	locus	77772791	77773038	.	+	.	ID=RLOC_00009068;geneIDs=comp140565_c0_seq1.path9;transcripts=comp140565_c0_seq1.mrna9
Chr1	stalkie_big_nohaplotig	mRNA	77772791	77773038	.	+	.	ID=comp140565_c0_seq1.mrna9;geneID=comp140565_c0_seq1.path9;Name=comp140565_c0_seq1;Dir=indeterminatecoverage=99.2;identity=97.6;matches=242;mismatches=6;indels=0;unknowns=0;Target=comp140565_c0_seq1 250 3 .;CDS_Target=comp140565_c0_seq1 249 4 .;locus=RLOC_00009068
Chr1	stalkie_big_nohaplotig	exon	77772791	77773038	97	+	.	Parent=comp140565_c0_seq1.mrna9
Chr1	stalkie_big_nohaplotig	CDS	77772792	77773037	.	+	0	Parent=comp140565_c0_seq1.mrna9
Chr1	gffcl	locus	77777030	77777378	.	+	.	ID=RLOC_00009069;geneIDs=comp160973_c0_seq1.path2;transcripts=comp160973_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	77777030	77777378	.	+	.	ID=comp160973_c0_seq1.mrna2;geneID=comp160973_c0_seq1.path2;Name=comp160973_c0_seq1;Dir=indeterminatecoverage=78.5;identity=93.5;matches=329;mismatches=19;indels=4;unknowns=0;Target=comp160973_c0_seq1 447 97 .;CDS_Target=comp160973_c0_seq1 400 359 .;locus=RLOC_00009069
Chr1	stalkie_big_nohaplotig	exon	77777030	77777378	93	+	.	Parent=comp160973_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	77777289	77777330	.	+	0	Parent=comp160973_c0_seq1.mrna2
Chr1	gffcl	locus	77787177	77789117	.	+	.	ID=RLOC_00009070;geneIDs=AAEL017378.1.path7;transcripts=AAEL017378.1.mrna7
Chr1	stalkie_big_nohaplotig	mRNA	77787177	77789117	.	+	.	ID=AAEL017378.1.mrna7;geneID=AAEL017378.1.path7;Name=AAEL017378.1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1927;mismatches=10;indels=8;unknowns=0;Target=AAEL017378.1 1941 1 .;locus=RLOC_00009070
Chr1	stalkie_big_nohaplotig	exon	77787177	77789117	99	+	.	Parent=AAEL017378.1.mrna7
Chr1	stalkie_big_nohaplotig	CDS	77787177	77789117	.	+	0	Parent=AAEL017378.1.mrna7
Chr1	stalkie_big_nohaplotig	mRNA	79636217	81076596	.	+	.	ID=comp163564_c2_seq1.mrna1;geneID=comp163564_c2_seq1.path1;Name=comp163564_c2_seq1;Dir=indeterminatecoverage=62.6;identity=74.4;matches=2138;mismatches=285;indels=449;unknowns=0;locus=RLOC_00009071
Chr1	stalkie_big_nohaplotig	exon	79636217	79636482	98	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2075 1810 .
Chr1	stalkie_big_nohaplotig	exon	79636541	79636787	83	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2320 2076 .
Chr1	stalkie_big_nohaplotig	exon	79700606	79700609	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2324 2321 .
Chr1	stalkie_big_nohaplotig	exon	79703274	79703279	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2330 2325 .
Chr1	stalkie_big_nohaplotig	exon	79706558	79706568	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2341 2331 .
Chr1	stalkie_big_nohaplotig	exon	79717986	79717991	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2363 2358 .
Chr1	stalkie_big_nohaplotig	exon	79718325	79718332	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2371 2364 .
Chr1	stalkie_big_nohaplotig	exon	79722022	79722027	83	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2377 2372 .
Chr1	stalkie_big_nohaplotig	exon	79729415	79729422	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2385 2378 .
Chr1	stalkie_big_nohaplotig	exon	79733709	79733726	72	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2400 2386 .
Chr1	stalkie_big_nohaplotig	exon	79742292	79742299	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2408 2401 .
Chr1	stalkie_big_nohaplotig	exon	79758452	79758457	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2414 2409 .
Chr1	stalkie_big_nohaplotig	exon	79766318	79766320	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2417 2415 .
Chr1	stalkie_big_nohaplotig	exon	79773422	79773426	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2422 2418 .
Chr1	stalkie_big_nohaplotig	exon	79779528	79779529	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2424 2423 .
Chr1	stalkie_big_nohaplotig	exon	79793532	79793537	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2430 2425 .
Chr1	stalkie_big_nohaplotig	exon	79797986	79797988	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2433 2431 .
Chr1	stalkie_big_nohaplotig	exon	79802201	79802208	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2441 2434 .
Chr1	stalkie_big_nohaplotig	exon	79807891	79807903	84	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2454 2442 .
Chr1	stalkie_big_nohaplotig	exon	79810090	79810108	60	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2484 2455 .
Chr1	stalkie_big_nohaplotig	exon	79818235	79818242	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2492 2485 .
Chr1	stalkie_big_nohaplotig	exon	79825587	79825590	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2496 2493 .
Chr1	stalkie_big_nohaplotig	exon	79844099	79844143	97	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 2541 2497 .
Chr1	stalkie_big_nohaplotig	exon	80455064	80455863	78	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3691 2811 .
Chr1	stalkie_big_nohaplotig	exon	80610214	80610223	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3701 3692 .
Chr1	stalkie_big_nohaplotig	exon	80612121	80612126	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3707 3702 .
Chr1	stalkie_big_nohaplotig	exon	80623036	80623041	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3713 3708 .
Chr1	stalkie_big_nohaplotig	exon	80636323	80636332	90	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3723 3714 .
Chr1	stalkie_big_nohaplotig	exon	80639219	80639222	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3732 3729 .
Chr1	stalkie_big_nohaplotig	exon	80663772	80663815	52	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3769 3733 .
Chr1	stalkie_big_nohaplotig	exon	80668253	80668261	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3778 3770 .
Chr1	stalkie_big_nohaplotig	exon	80674572	80674610	58	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3836 3797 .
Chr1	stalkie_big_nohaplotig	exon	80679346	80679389	56	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3889 3837 .
Chr1	stalkie_big_nohaplotig	exon	80685669	80685709	61	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3935 3890 .
Chr1	stalkie_big_nohaplotig	exon	80686968	80686990	60	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3968 3936 .
Chr1	stalkie_big_nohaplotig	exon	80688973	80688983	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3979 3969 .
Chr1	stalkie_big_nohaplotig	exon	80693668	80693673	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3985 3980 .
Chr1	stalkie_big_nohaplotig	exon	80697597	80697604	87	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3993 3986 .
Chr1	stalkie_big_nohaplotig	exon	80703206	80703214	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4002 3994 .
Chr1	stalkie_big_nohaplotig	exon	80711277	80711280	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4006 4003 .
Chr1	stalkie_big_nohaplotig	exon	80717286	80717288	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4009 4007 .
Chr1	stalkie_big_nohaplotig	exon	80718947	80718953	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4016 4010 .
Chr1	stalkie_big_nohaplotig	exon	80723429	80723430	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4018 4017 .
Chr1	stalkie_big_nohaplotig	exon	80829620	80829623	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4022 4019 .
Chr1	stalkie_big_nohaplotig	exon	80841695	80841705	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4033 4023 .
Chr1	stalkie_big_nohaplotig	exon	80846432	80846441	16	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4112 4054 .
Chr1	stalkie_big_nohaplotig	exon	80848104	80848142	56	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4160 4115 .
Chr1	stalkie_big_nohaplotig	exon	80870257	80870265	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4169 4161 .
Chr1	stalkie_big_nohaplotig	exon	80888465	80888497	54	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4213 4170 .
Chr1	stalkie_big_nohaplotig	exon	80888791	80888800	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4223 4214 .
Chr1	stalkie_big_nohaplotig	exon	80892893	80892901	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4235 4227 .
Chr1	stalkie_big_nohaplotig	exon	80893634	80893645	75	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4247 4236 .
Chr1	stalkie_big_nohaplotig	exon	80898304	80898314	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4258 4248 .
Chr1	stalkie_big_nohaplotig	exon	80948663	80948817	78	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4595 4448 .
Chr1	stalkie_big_nohaplotig	exon	80959112	80959118	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4602 4596 .
Chr1	stalkie_big_nohaplotig	exon	80973076	80973091	87	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4618 4603 .
Chr1	stalkie_big_nohaplotig	exon	80977783	80977788	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4624 4619 .
Chr1	stalkie_big_nohaplotig	exon	80980876	80980901	42	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4635 4625 .
Chr1	stalkie_big_nohaplotig	exon	80987943	80987964	77	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4654 4636 .
Chr1	stalkie_big_nohaplotig	exon	81009609	81009653	40	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4672 4655 .
Chr1	stalkie_big_nohaplotig	exon	81010499	81010535	46	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4737 4678 .
Chr1	stalkie_big_nohaplotig	exon	81015376	81015385	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4747 4738 .
Chr1	stalkie_big_nohaplotig	exon	81019054	81019064	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4771 4761 .
Chr1	stalkie_big_nohaplotig	exon	81020887	81020892	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4777 4772 .
Chr1	stalkie_big_nohaplotig	exon	81029460	81029469	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4799 4790 .
Chr1	stalkie_big_nohaplotig	exon	81047304	81047365	61	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4887 4834 .
Chr1	stalkie_big_nohaplotig	exon	81060971	81061007	33	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4955 4888 .
Chr1	stalkie_big_nohaplotig	exon	81062008	81062017	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4965 4956 .
Chr1	stalkie_big_nohaplotig	exon	81064172	81064207	36	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 5036 4971 .
Chr1	stalkie_big_nohaplotig	exon	81065408	81065423	68	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 5058 5037 .
Chr1	stalkie_big_nohaplotig	exon	81065723	81065732	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 5068 5059 .
Chr1	stalkie_big_nohaplotig	exon	81068787	81068827	33	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 5196 5123 .
Chr1	stalkie_big_nohaplotig	exon	81076578	81076596	100	+	.	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 5222 5204 .
Chr1	stalkie_big_nohaplotig	CDS	80455087	80455863	.	+	0	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3691 2834 .
Chr1	stalkie_big_nohaplotig	CDS	80610214	80610223	.	+	0	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3701 3692 .
Chr1	stalkie_big_nohaplotig	CDS	80612121	80612126	.	+	2	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3707 3702 .
Chr1	stalkie_big_nohaplotig	CDS	80623036	80623041	.	+	2	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3713 3708 .
Chr1	stalkie_big_nohaplotig	CDS	80636323	80636332	.	+	2	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3723 3714 .
Chr1	stalkie_big_nohaplotig	CDS	80639219	80639222	.	+	1	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3732 3729 .
Chr1	stalkie_big_nohaplotig	CDS	80663772	80663815	.	+	0	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3769 3733 .
Chr1	stalkie_big_nohaplotig	CDS	80668253	80668261	.	+	1	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3778 3770 .
Chr1	stalkie_big_nohaplotig	CDS	80674572	80674610	.	+	1	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3836 3797 .
Chr1	stalkie_big_nohaplotig	CDS	80679346	80679389	.	+	1	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3889 3837 .
Chr1	stalkie_big_nohaplotig	CDS	80685669	80685709	.	+	2	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3935 3890 .
Chr1	stalkie_big_nohaplotig	CDS	80686968	80686990	.	+	0	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3968 3936 .
Chr1	stalkie_big_nohaplotig	CDS	80688973	80688983	.	+	1	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3979 3969 .
Chr1	stalkie_big_nohaplotig	CDS	80693668	80693673	.	+	2	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3985 3980 .
Chr1	stalkie_big_nohaplotig	CDS	80697597	80697604	.	+	2	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 3993 3986 .
Chr1	stalkie_big_nohaplotig	CDS	80703206	80703214	.	+	0	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4002 3994 .
Chr1	stalkie_big_nohaplotig	CDS	80711277	80711280	.	+	0	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4006 4003 .
Chr1	stalkie_big_nohaplotig	CDS	80717286	80717288	.	+	2	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4009 4007 .
Chr1	stalkie_big_nohaplotig	CDS	80718947	80718953	.	+	2	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4016 4010 .
Chr1	stalkie_big_nohaplotig	CDS	80723429	80723430	.	+	1	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4018 4017 .
Chr1	stalkie_big_nohaplotig	CDS	80829620	80829623	.	+	2	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4022 4019 .
Chr1	stalkie_big_nohaplotig	CDS	80841695	80841705	.	+	1	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4033 4023 .
Chr1	stalkie_big_nohaplotig	CDS	80846432	80846441	.	+	2	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4112 4054 .
Chr1	stalkie_big_nohaplotig	CDS	80848104	80848142	.	+	1	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4160 4115 .
Chr1	stalkie_big_nohaplotig	CDS	80870257	80870265	.	+	1	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4169 4161 .
Chr1	stalkie_big_nohaplotig	CDS	80888465	80888497	.	+	1	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4213 4170 .
Chr1	stalkie_big_nohaplotig	CDS	80888791	80888800	.	+	1	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4223 4214 .
Chr1	stalkie_big_nohaplotig	CDS	80892893	80892901	.	+	0	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4235 4227 .
Chr1	stalkie_big_nohaplotig	CDS	80893634	80893645	.	+	0	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4247 4236 .
Chr1	stalkie_big_nohaplotig	CDS	80898304	80898314	.	+	0	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4258 4248 .
Chr1	stalkie_big_nohaplotig	CDS	80948663	80948740	.	+	1	Parent=comp163564_c2_seq1.mrna1;Target=comp163564_c2_seq1 4525 4448 .
Chr1	gffcl	locus	77834502	77834889	.	+	.	ID=RLOC_00009072;geneIDs=comp112790_c0_seq1.path3;transcripts=comp112790_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	77834502	77834889	.	+	.	ID=comp112790_c0_seq1.mrna3;geneID=comp112790_c0_seq1.path3;Name=comp112790_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=387;mismatches=0;indels=1;unknowns=0;Target=comp112790_c0_seq1 387 1 .;CDS_Target=comp112790_c0_seq1 287 177 .;locus=RLOC_00009072
Chr1	stalkie_big_nohaplotig	exon	77834502	77834889	99	+	.	Parent=comp112790_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	77834679	77834789	.	+	0	Parent=comp112790_c0_seq1.mrna3
Chr1	gffcl	locus	77835921	77838054	.	.	.	ID=RLOC_00009073;geneIDs=Dp_FBgn0249247.9.path2,comp162761_c1_seq1.path2;transcripts=comp162761_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	77835921	77838054	.	+	.	ID=comp162761_c1_seq1.mrna2;geneID=comp162761_c1_seq1.path2;Name=comp162761_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2131;mismatches=3;indels=0;unknowns=0;Target=comp162761_c1_seq1 2134 1 .;CDS_Target=comp162761_c1_seq1 1327 1136 .;locus=RLOC_00009073
Chr1	stalkie_big_nohaplotig	exon	77835921	77838054	99	+	.	Parent=comp162761_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	77837056	77837247	.	+	0	Parent=comp162761_c1_seq1.mrna2
Chr1	gffcl	locus	78187263	78189257	.	+	.	ID=RLOC_00009076;geneIDs=comp163093_c8_seq1.path1;transcripts=comp163093_c8_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	78187263	78189257	.	+	.	ID=comp163093_c8_seq1.mrna1;geneID=comp163093_c8_seq1.path1;Name=comp163093_c8_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=1967;mismatches=28;indels=18;unknowns=0;Target=comp163093_c8_seq1 2013 1 .;CDS_Target=comp163093_c8_seq1 2011 800 .;locus=RLOC_00009076
Chr1	stalkie_big_nohaplotig	exon	78187263	78189257	97	+	.	Parent=comp163093_c8_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	78188062	78189255	.	+	0	Parent=comp163093_c8_seq1.mrna1
Chr1	gffcl	locus	78201184	78203178	.	-	.	ID=RLOC_00009077;geneIDs=comp163093_c8_seq1.path2;transcripts=comp163093_c8_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	78201184	78203178	.	-	.	ID=comp163093_c8_seq1.mrna2;geneID=comp163093_c8_seq1.path2;Name=comp163093_c8_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=1967;mismatches=28;indels=18;unknowns=0;Target=comp163093_c8_seq1 2013 1 .;CDS_Target=comp163093_c8_seq1 2011 800 .;locus=RLOC_00009077
Chr1	stalkie_big_nohaplotig	exon	78201184	78203178	97	-	.	Parent=comp163093_c8_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	78201186	78202379	.	-	0	Parent=comp163093_c8_seq1.mrna2
Chr1	gffcl	locus	78334883	78335432	.	-	.	ID=RLOC_00009078;geneIDs=CPIJ017423.path2;transcripts=CPIJ017423.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	78334883	78335432	.	-	.	ID=CPIJ017423.mrna2;geneID=CPIJ017423.path2;Name=CPIJ017423;Dir=indeterminatecoverage=92.1;identity=99.8;matches=549;mismatches=1;indels=0;unknowns=0;Target=CPIJ017423 597 48 .;CDS_Target=CPIJ017423 597 49 .;locus=RLOC_00009078
Chr1	stalkie_big_nohaplotig	exon	78334883	78335432	99	-	.	Parent=CPIJ017423.mrna2
Chr1	stalkie_big_nohaplotig	CDS	78334883	78335431	.	-	0	Parent=CPIJ017423.mrna2
Chr1	gffcl	locus	78381698	78382613	.	+	.	ID=RLOC_00009079;geneIDs=comp160822_c0_seq1.path1;transcripts=comp160822_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	78381698	78382613	.	+	.	ID=comp160822_c0_seq1.mrna1;geneID=comp160822_c0_seq1.path1;Name=comp160822_c0_seq1;Dir=indeterminatecoverage=45.4;identity=84.7;matches=819;mismatches=85;indels=63;unknowns=0;Target=comp160822_c0_seq1 1043 89 .;CDS_Target=comp160822_c0_seq1 485 366 .;locus=RLOC_00009079
Chr1	stalkie_big_nohaplotig	exon	78381698	78382613	84	+	.	Parent=comp160822_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	78381969	78382084	.	+	0	Parent=comp160822_c0_seq1.mrna1
Chr1	gffcl	locus	78427858	78429739	.	+	.	ID=RLOC_00009080;geneIDs=FBgn0039626.1.path1;transcripts=FBgn0039626.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	78427858	78429739	.	+	.	ID=FBgn0039626.1.mrna1;geneID=FBgn0039626.1.path1;Name=FBgn0039626.1;Dir=sensecoverage=100.0;identity=100.0;matches=1629;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009080
Chr1	stalkie_big_nohaplotig	exon	78427858	78428464	100	+	.	Parent=FBgn0039626.1.mrna1;Target=FBgn0039626.1 1 607 +
Chr1	stalkie_big_nohaplotig	exon	78428550	78428778	100	+	.	Parent=FBgn0039626.1.mrna1;Target=FBgn0039626.1 608 836 +
Chr1	stalkie_big_nohaplotig	exon	78428829	78429012	100	+	.	Parent=FBgn0039626.1.mrna1;Target=FBgn0039626.1 837 1020 +
Chr1	stalkie_big_nohaplotig	exon	78429077	78429328	100	+	.	Parent=FBgn0039626.1.mrna1;Target=FBgn0039626.1 1021 1272 +
Chr1	stalkie_big_nohaplotig	exon	78429383	78429739	100	+	.	Parent=FBgn0039626.1.mrna1;Target=FBgn0039626.1 1273 1629 +
Chr1	stalkie_big_nohaplotig	CDS	78427858	78428464	.	+	0	Parent=FBgn0039626.1.mrna1;Target=FBgn0039626.1 1 607 +
Chr1	stalkie_big_nohaplotig	CDS	78428550	78428778	.	+	2	Parent=FBgn0039626.1.mrna1;Target=FBgn0039626.1 608 836 +
Chr1	stalkie_big_nohaplotig	CDS	78428829	78429012	.	+	1	Parent=FBgn0039626.1.mrna1;Target=FBgn0039626.1 837 1020 +
Chr1	stalkie_big_nohaplotig	CDS	78429077	78429328	.	+	0	Parent=FBgn0039626.1.mrna1;Target=FBgn0039626.1 1021 1272 +
Chr1	stalkie_big_nohaplotig	CDS	78429383	78429739	.	+	0	Parent=FBgn0039626.1.mrna1;Target=FBgn0039626.1 1273 1629 +
Chr1	gffcl	locus	78436262	78464628	.	+	.	ID=RLOC_00009081;geneIDs=FBgn0031114.1.path1;transcripts=FBgn0031114.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	78436262	78464628	.	+	.	ID=FBgn0031114.1.mrna1;geneID=FBgn0031114.1.path1;Name=FBgn0031114.1;Dir=sensecoverage=100.0;identity=99.9;matches=1588;mismatches=1;indels=1;unknowns=0;Target=FBgn0031114.1 3 50 +;locus=RLOC_00009081
Chr1	stalkie_big_nohaplotig	exon	78436262	78437664	99	+	.	Parent=FBgn0031114.1.mrna1;Target=FBgn0031114.1 1 1404 +
Chr1	stalkie_big_nohaplotig	exon	78464443	78464628	100	+	.	Parent=FBgn0031114.1.mrna1;Target=FBgn0031114.1 1405 1590 +
Chr1	stalkie_big_nohaplotig	CDS	78436264	78436310	.	+	0	Parent=FBgn0031114.1.mrna1
Chr1	gffcl	locus	78581849	78583801	.	+	.	ID=RLOC_00009082;geneIDs=FBgn0024250.1.path1;transcripts=FBgn0024250.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	78581849	78583801	.	+	.	ID=FBgn0024250.1.mrna1;geneID=FBgn0024250.1.path1;Name=FBgn0024250.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1952;mismatches=1;indels=0;unknowns=0;Target=FBgn0024250.1 1953 1 .;locus=RLOC_00009082
Chr1	stalkie_big_nohaplotig	exon	78581849	78583801	99	+	.	Parent=FBgn0024250.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	78581849	78583801	.	+	0	Parent=FBgn0024250.1.mrna1
Chr1	gffcl	locus	78655227	78711244	.	-	.	ID=RLOC_00009083;geneIDs=FBgn0000426.1.path1;transcripts=FBgn0000426.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	78655227	78711244	.	-	.	ID=FBgn0000426.1.mrna1;geneID=FBgn0000426.1.path1;Name=FBgn0000426.1;Dir=sensecoverage=100.0;identity=99.7;matches=362;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009083
Chr1	stalkie_big_nohaplotig	exon	78655227	78655315	98	-	.	Parent=FBgn0000426.1.mrna1;Target=FBgn0000426.1 275 363 +
Chr1	stalkie_big_nohaplotig	exon	78710971	78711244	100	-	.	Parent=FBgn0000426.1.mrna1;Target=FBgn0000426.1 1 274 +
Chr1	stalkie_big_nohaplotig	CDS	78655227	78655315	.	-	2	Parent=FBgn0000426.1.mrna1;Target=FBgn0000426.1 275 363 +
Chr1	stalkie_big_nohaplotig	CDS	78710971	78711244	.	-	0	Parent=FBgn0000426.1.mrna1;Target=FBgn0000426.1 1 274 +
Chr1	gffcl	locus	78721816	78722561	.	-	.	ID=RLOC_00009084;geneIDs=comp86524_c0_seq1.path1;transcripts=comp86524_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	78721816	78722561	.	-	.	ID=comp86524_c0_seq1.mrna1;geneID=comp86524_c0_seq1.path1;Name=comp86524_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=606;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009084
Chr1	stalkie_big_nohaplotig	exon	78721816	78722075	100	-	.	Parent=comp86524_c0_seq1.mrna1;Target=comp86524_c0_seq1 347 606 +
Chr1	stalkie_big_nohaplotig	exon	78722135	78722285	100	-	.	Parent=comp86524_c0_seq1.mrna1;Target=comp86524_c0_seq1 196 346 +
Chr1	stalkie_big_nohaplotig	exon	78722367	78722561	100	-	.	Parent=comp86524_c0_seq1.mrna1;Target=comp86524_c0_seq1 1 195 +
Chr1	stalkie_big_nohaplotig	CDS	78722153	78722285	.	-	1	Parent=comp86524_c0_seq1.mrna1;Target=comp86524_c0_seq1 196 328 +
Chr1	stalkie_big_nohaplotig	CDS	78722367	78722560	.	-	0	Parent=comp86524_c0_seq1.mrna1;Target=comp86524_c0_seq1 2 195 +
Chr1	gffcl	locus	78765557	78766248	.	-	.	ID=RLOC_00009085;geneIDs=comp68893_c0_seq1.path1;transcripts=comp68893_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	78765557	78766248	.	-	.	ID=comp68893_c0_seq1.mrna1;geneID=comp68893_c0_seq1.path1;Name=comp68893_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=634;mismatches=0;indels=0;unknowns=0;Target=comp68893_c0_seq1 426 632 .;locus=RLOC_00009085
Chr1	stalkie_big_nohaplotig	exon	78765557	78765814	100	-	.	Parent=comp68893_c0_seq1.mrna1;Target=comp68893_c0_seq1 1 258 -
Chr1	stalkie_big_nohaplotig	exon	78765873	78766248	100	-	.	Parent=comp68893_c0_seq1.mrna1;Target=comp68893_c0_seq1 259 634 -
Chr1	stalkie_big_nohaplotig	CDS	78766040	78766246	.	-	0	Parent=comp68893_c0_seq1.mrna1
Chr1	gffcl	locus	78782810	78790787	.	+	.	ID=RLOC_00009086;geneIDs=FBgn0029941.1.path1;transcripts=FBgn0029941.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	78782810	78790787	.	+	.	ID=FBgn0029941.1.mrna1;geneID=FBgn0029941.1.path1;Name=FBgn0029941.1;Dir=sensecoverage=100.0;identity=99.9;matches=2434;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009086
Chr1	stalkie_big_nohaplotig	exon	78782810	78783448	100	+	.	Parent=FBgn0029941.1.mrna1;Target=FBgn0029941.1 1 639 +
Chr1	stalkie_big_nohaplotig	exon	78783505	78784281	99	+	.	Parent=FBgn0029941.1.mrna1;Target=FBgn0029941.1 640 1416 +
Chr1	stalkie_big_nohaplotig	exon	78784334	78784844	99	+	.	Parent=FBgn0029941.1.mrna1;Target=FBgn0029941.1 1417 1927 +
Chr1	stalkie_big_nohaplotig	exon	78790160	78790339	100	+	.	Parent=FBgn0029941.1.mrna1;Target=FBgn0029941.1 1928 2107 +
Chr1	stalkie_big_nohaplotig	exon	78790405	78790539	100	+	.	Parent=FBgn0029941.1.mrna1;Target=FBgn0029941.1 2108 2242 +
Chr1	stalkie_big_nohaplotig	exon	78790594	78790787	100	+	.	Parent=FBgn0029941.1.mrna1;Target=FBgn0029941.1 2243 2436 +
Chr1	stalkie_big_nohaplotig	CDS	78782810	78783448	.	+	0	Parent=FBgn0029941.1.mrna1;Target=FBgn0029941.1 1 639 +
Chr1	stalkie_big_nohaplotig	CDS	78783505	78784281	.	+	0	Parent=FBgn0029941.1.mrna1;Target=FBgn0029941.1 640 1416 +
Chr1	stalkie_big_nohaplotig	CDS	78784334	78784844	.	+	0	Parent=FBgn0029941.1.mrna1;Target=FBgn0029941.1 1417 1927 +
Chr1	stalkie_big_nohaplotig	CDS	78790160	78790339	.	+	2	Parent=FBgn0029941.1.mrna1;Target=FBgn0029941.1 1928 2107 +
Chr1	stalkie_big_nohaplotig	CDS	78790405	78790539	.	+	2	Parent=FBgn0029941.1.mrna1;Target=FBgn0029941.1 2108 2242 +
Chr1	stalkie_big_nohaplotig	CDS	78790594	78790787	.	+	2	Parent=FBgn0029941.1.mrna1;Target=FBgn0029941.1 2243 2436 +
Chr1	gffcl	locus	78785093	80739897	.	-	.	ID=RLOC_00009087;geneIDs=comp159146_c0_seq1.path1,comp161472_c1_seq1.path1;transcripts=comp161472_c1_seq1.mrna1,comp159146_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	78785093	78858938	.	-	.	ID=comp161472_c1_seq1.mrna1;geneID=comp161472_c1_seq1.path1;Name=comp161472_c1_seq1;Dir=antisensecoverage=74.0;identity=96.6;matches=1889;mismatches=39;indels=27;unknowns=0;Target=comp161472_c1_seq1 233 445 .;locus=RLOC_00009087
Chr1	stalkie_big_nohaplotig	exon	78785093	78787013	96	-	.	Parent=comp161472_c1_seq1.mrna1;Target=comp161472_c1_seq1 1 1900 -
Chr1	stalkie_big_nohaplotig	exon	78793114	78793116	100	-	.	Parent=comp161472_c1_seq1.mrna1;Target=comp161472_c1_seq1 1901 1903 -
Chr1	stalkie_big_nohaplotig	exon	78798924	78798927	100	-	.	Parent=comp161472_c1_seq1.mrna1;Target=comp161472_c1_seq1 1904 1907 -
Chr1	stalkie_big_nohaplotig	exon	78814169	78814179	90	-	.	Parent=comp161472_c1_seq1.mrna1;Target=comp161472_c1_seq1 1908 1918 -
Chr1	stalkie_big_nohaplotig	exon	78818587	78818588	100	-	.	Parent=comp161472_c1_seq1.mrna1;Target=comp161472_c1_seq1 1919 1920 -
Chr1	stalkie_big_nohaplotig	exon	78825465	78825469	100	-	.	Parent=comp161472_c1_seq1.mrna1;Target=comp161472_c1_seq1 1921 1925 -
Chr1	stalkie_big_nohaplotig	exon	78827024	78827025	100	-	.	Parent=comp161472_c1_seq1.mrna1;Target=comp161472_c1_seq1 1926 1927 -
Chr1	stalkie_big_nohaplotig	exon	78858935	78858938	100	-	.	Parent=comp161472_c1_seq1.mrna1;Target=comp161472_c1_seq1 1928 1931 -
Chr1	stalkie_big_nohaplotig	CDS	78785325	78785537	.	-	0	Parent=comp161472_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	78792054	80739897	.	-	.	ID=comp159146_c0_seq1.mrna1;geneID=comp159146_c0_seq1.path1;Name=comp159146_c0_seq1;Dir=antisensecoverage=98.1;identity=98.2;matches=2378;mismatches=28;indels=16;unknowns=0;Target=comp159146_c0_seq1 1960 2025 .;locus=RLOC_00009087
Chr1	stalkie_big_nohaplotig	exon	78792054	78793613	99	-	.	Parent=comp159146_c0_seq1.mrna1;Target=comp159146_c0_seq1 1 1561 -
Chr1	stalkie_big_nohaplotig	exon	78793671	78794498	94	-	.	Parent=comp159146_c0_seq1.mrna1;Target=comp159146_c0_seq1 1562 2386 -
Chr1	stalkie_big_nohaplotig	exon	80702541	80702543	100	-	.	Parent=comp159146_c0_seq1.mrna1;Target=comp159146_c0_seq1 2387 2389 -
Chr1	stalkie_big_nohaplotig	exon	80707786	80707790	80	-	.	Parent=comp159146_c0_seq1.mrna1;Target=comp159146_c0_seq1 2390 2394 -
Chr1	stalkie_big_nohaplotig	exon	80714604	80714610	100	-	.	Parent=comp159146_c0_seq1.mrna1;Target=comp159146_c0_seq1 2395 2401 -
Chr1	stalkie_big_nohaplotig	exon	80734956	80734959	100	-	.	Parent=comp159146_c0_seq1.mrna1;Target=comp159146_c0_seq1 2402 2405 -
Chr1	stalkie_big_nohaplotig	exon	80739890	80739897	100	-	.	Parent=comp159146_c0_seq1.mrna1;Target=comp159146_c0_seq1 2406 2413 -
Chr1	stalkie_big_nohaplotig	CDS	78794064	78794129	.	-	0	Parent=comp159146_c0_seq1.mrna1
Chr1	gffcl	locus	78787678	78789489	.	+	.	ID=RLOC_00009088;geneIDs=comp157077_c0_seq1.path1;transcripts=comp157077_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	78787678	78789489	.	+	.	ID=comp157077_c0_seq1.mrna1;geneID=comp157077_c0_seq1.path1;Name=comp157077_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1808;mismatches=2;indels=3;unknowns=0;Target=comp157077_c0_seq1 1811 1 .;CDS_Target=comp157077_c0_seq1 828 679 .;locus=RLOC_00009088
Chr1	stalkie_big_nohaplotig	exon	78787678	78789489	99	+	.	Parent=comp157077_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	78788356	78788505	.	+	0	Parent=comp157077_c0_seq1.mrna1
Chr1	gffcl	locus	78885886	78948639	.	.	.	ID=RLOC_00009091;geneIDs=FBgn0028982.1.path1,comp52641_c0_seq1.path1;transcripts=FBgn0028982.1.mrna1,comp52641_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	78885886	78948639	.	-	.	ID=FBgn0028982.1.mrna1;geneID=FBgn0028982.1.path1;Name=FBgn0028982.1;Dir=sensecoverage=97.0;identity=100.0;matches=5070;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009091
Chr1	stalkie_big_nohaplotig	exon	78885886	78890488	99	-	.	Parent=FBgn0028982.1.mrna1;Target=FBgn0028982.1 624 5226 +
Chr1	stalkie_big_nohaplotig	exon	78890559	78890704	100	-	.	Parent=FBgn0028982.1.mrna1;Target=FBgn0028982.1 478 623 +
Chr1	stalkie_big_nohaplotig	exon	78899212	78899214	100	-	.	Parent=FBgn0028982.1.mrna1;Target=FBgn0028982.1 475 477 +
Chr1	stalkie_big_nohaplotig	exon	78920564	78920568	100	-	.	Parent=FBgn0028982.1.mrna1;Target=FBgn0028982.1 470 474 +
Chr1	stalkie_big_nohaplotig	exon	78944297	78944301	100	-	.	Parent=FBgn0028982.1.mrna1;Target=FBgn0028982.1 465 469 +
Chr1	stalkie_big_nohaplotig	exon	78948273	78948385	100	-	.	Parent=FBgn0028982.1.mrna1;Target=FBgn0028982.1 352 464 +
Chr1	stalkie_big_nohaplotig	exon	78948444	78948639	100	-	.	Parent=FBgn0028982.1.mrna1;Target=FBgn0028982.1 156 351 +
Chr1	stalkie_big_nohaplotig	CDS	78885886	78890488	.	-	1	Parent=FBgn0028982.1.mrna1;Target=FBgn0028982.1 624 5226 +
Chr1	stalkie_big_nohaplotig	CDS	78890559	78890704	.	-	0	Parent=FBgn0028982.1.mrna1;Target=FBgn0028982.1 478 623 +
Chr1	stalkie_big_nohaplotig	CDS	78899212	78899214	.	-	0	Parent=FBgn0028982.1.mrna1;Target=FBgn0028982.1 475 477 +
Chr1	stalkie_big_nohaplotig	CDS	78920564	78920568	.	-	2	Parent=FBgn0028982.1.mrna1;Target=FBgn0028982.1 470 474 +
Chr1	stalkie_big_nohaplotig	CDS	78944297	78944301	.	-	1	Parent=FBgn0028982.1.mrna1;Target=FBgn0028982.1 465 469 +
Chr1	stalkie_big_nohaplotig	CDS	78948273	78948385	.	-	0	Parent=FBgn0028982.1.mrna1;Target=FBgn0028982.1 352 464 +
Chr1	stalkie_big_nohaplotig	CDS	78948444	78948638	.	-	0	Parent=FBgn0028982.1.mrna1;Target=FBgn0028982.1 157 351 +
Chr1	stalkie_big_nohaplotig	mRNA	78947505	78948287	.	+	.	ID=comp52641_c0_seq1.mrna1;geneID=comp52641_c0_seq1.path1;Name=comp52641_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=783;mismatches=0;indels=0;unknowns=0;Target=comp52641_c0_seq1 785 3 .;CDS_Target=comp52641_c0_seq1 227 48 .;locus=RLOC_00009091
Chr1	stalkie_big_nohaplotig	exon	78947505	78948287	100	+	.	Parent=comp52641_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	78947550	78947729	.	+	0	Parent=comp52641_c0_seq1.mrna1
Chr1	gffcl	locus	78970982	78971696	.	-	.	ID=RLOC_00009093;geneIDs=comp148126_c0_seq1.path1;transcripts=comp148126_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	78970982	78971696	.	-	.	ID=comp148126_c0_seq1.mrna1;geneID=comp148126_c0_seq1.path1;Name=comp148126_c0_seq1;Dir=sensecoverage=97.4;identity=96.7;matches=647;mismatches=11;indels=11;unknowns=0;Target=comp148126_c0_seq1 19 132 +;locus=RLOC_00009093
Chr1	stalkie_big_nohaplotig	exon	78970982	78971224	100	-	.	Parent=comp148126_c0_seq1.mrna1;Target=comp148126_c0_seq1 443 685 +
Chr1	stalkie_big_nohaplotig	exon	78971282	78971696	94	-	.	Parent=comp148126_c0_seq1.mrna1;Target=comp148126_c0_seq1 17 442 +
Chr1	stalkie_big_nohaplotig	CDS	78971581	78971694	.	-	0	Parent=comp148126_c0_seq1.mrna1
Chr1	gffcl	locus	78993906	78994846	.	-	.	ID=RLOC_00009094;geneIDs=comp163779_c0_seq1.path5;transcripts=comp163779_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	78993906	78994846	.	-	.	ID=comp163779_c0_seq1.mrna5;geneID=comp163779_c0_seq1.path5;Name=comp163779_c0_seq1;Dir=indeterminatecoverage=97.2;identity=94.2;matches=895;mismatches=46;indels=9;unknowns=0;Target=comp163779_c0_seq1 955 6 .;CDS_Target=comp163779_c0_seq1 729 499 .;locus=RLOC_00009094
Chr1	stalkie_big_nohaplotig	exon	78993906	78994846	94	-	.	Parent=comp163779_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	78994132	78994362	.	-	0	Parent=comp163779_c0_seq1.mrna5
Chr1	gffcl	locus	79009885	79010948	.	-	.	ID=RLOC_00009095;geneIDs=comp161869_c2_seq1.path3;transcripts=comp161869_c2_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	79009885	79010948	.	-	.	ID=comp161869_c2_seq1.mrna3;geneID=comp161869_c2_seq1.path3;Name=comp161869_c2_seq1;Dir=indeterminatecoverage=98.5;identity=94.1;matches=1006;mismatches=57;indels=6;unknowns=0;Target=comp161869_c2_seq1 1068 1 .;CDS_Target=comp161869_c2_seq1 129 1 .;locus=RLOC_00009095
Chr1	stalkie_big_nohaplotig	exon	79009885	79010948	94	-	.	Parent=comp161869_c2_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	79010820	79010948	.	-	0	Parent=comp161869_c2_seq1.mrna3
Chr1	gffcl	locus	79019905	79022608	.	+	.	ID=RLOC_00009096;geneIDs=comp160790_c1_seq1.path1;transcripts=comp160790_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	79019905	79022608	.	+	.	ID=comp160790_c1_seq1.mrna1;geneID=comp160790_c1_seq1.path1;Name=comp160790_c1_seq1;Dir=indeterminatecoverage=100.0;identity=96.5;matches=1474;mismatches=4;indels=50;unknowns=0;Target=comp160790_c1_seq1 54 1 .;locus=RLOC_00009096
Chr1	stalkie_big_nohaplotig	exon	79019905	79020191	98	+	.	Parent=comp160790_c1_seq1.mrna1;Target=comp160790_c1_seq1 288 1 .
Chr1	stalkie_big_nohaplotig	exon	79020333	79020715	100	+	.	Parent=comp160790_c1_seq1.mrna1;Target=comp160790_c1_seq1 671 289 .
Chr1	stalkie_big_nohaplotig	exon	79021081	79021150	100	+	.	Parent=comp160790_c1_seq1.mrna1;Target=comp160790_c1_seq1 741 672 .
Chr1	stalkie_big_nohaplotig	exon	79021762	79022242	89	+	.	Parent=comp160790_c1_seq1.mrna1;Target=comp160790_c1_seq1 1173 742 .
Chr1	stalkie_big_nohaplotig	exon	79022303	79022608	99	+	.	Parent=comp160790_c1_seq1.mrna1;Target=comp160790_c1_seq1 1479 1174 .
Chr1	stalkie_big_nohaplotig	CDS	79019905	79019957	.	+	0	Parent=comp160790_c1_seq1.mrna1
Chr1	gffcl	locus	79021136	79022542	.	-	.	ID=RLOC_00009097;geneIDs=Dv_FBgn0201266.6.path3;transcripts=Dv_FBgn0201266.6.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	79021136	79022542	.	-	.	ID=Dv_FBgn0201266.6.mrna3;geneID=Dv_FBgn0201266.6.path3;Name=Dv_FBgn0201266.6;Dir=sensecoverage=100.0;identity=99.9;matches=686;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009097
Chr1	stalkie_big_nohaplotig	exon	79021136	79021150	100	-	.	Parent=Dv_FBgn0201266.6.mrna3;Target=Dv_FBgn0201266.6 673 687 +
Chr1	stalkie_big_nohaplotig	exon	79021762	79021793	100	-	.	Parent=Dv_FBgn0201266.6.mrna3;Target=Dv_FBgn0201266.6 641 672 +
Chr1	stalkie_big_nohaplotig	exon	79021843	79022242	100	-	.	Parent=Dv_FBgn0201266.6.mrna3;Target=Dv_FBgn0201266.6 241 640 +
Chr1	stalkie_big_nohaplotig	exon	79022303	79022542	99	-	.	Parent=Dv_FBgn0201266.6.mrna3;Target=Dv_FBgn0201266.6 1 240 +
Chr1	stalkie_big_nohaplotig	CDS	79021136	79021150	.	-	0	Parent=Dv_FBgn0201266.6.mrna3;Target=Dv_FBgn0201266.6 673 687 +
Chr1	stalkie_big_nohaplotig	CDS	79021762	79021793	.	-	2	Parent=Dv_FBgn0201266.6.mrna3;Target=Dv_FBgn0201266.6 641 672 +
Chr1	stalkie_big_nohaplotig	CDS	79021843	79022242	.	-	0	Parent=Dv_FBgn0201266.6.mrna3;Target=Dv_FBgn0201266.6 241 640 +
Chr1	stalkie_big_nohaplotig	CDS	79022303	79022542	.	-	0	Parent=Dv_FBgn0201266.6.mrna3;Target=Dv_FBgn0201266.6 1 240 +
Chr1	gffcl	locus	79081833	79082019	.	-	.	ID=RLOC_00009099;geneIDs=comp163911_c1_seq1.path1;transcripts=comp163911_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	79081833	79082019	.	-	.	ID=comp163911_c1_seq1.mrna1;geneID=comp163911_c1_seq1.path1;Name=comp163911_c1_seq1;Dir=indeterminatecoverage=11.0;identity=99.5;matches=186;mismatches=1;indels=0;unknowns=0;Target=comp163911_c1_seq1 187 1 .;locus=RLOC_00009099
Chr1	stalkie_big_nohaplotig	exon	79081833	79082019	99	-	.	Parent=comp163911_c1_seq1.mrna1
Chr1	gffcl	locus	79088941	79089495	.	-	.	ID=RLOC_00009100;geneIDs=comp150082_c0_seq1.path1;transcripts=comp150082_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	79088941	79089495	.	-	.	ID=comp150082_c0_seq1.mrna1;geneID=comp150082_c0_seq1.path1;Name=comp150082_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=553;mismatches=2;indels=0;unknowns=0;Target=comp150082_c0_seq1 555 1 .;CDS_Target=comp150082_c0_seq1 470 282 .;locus=RLOC_00009100
Chr1	stalkie_big_nohaplotig	exon	79088941	79089495	99	-	.	Parent=comp150082_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	79089026	79089214	.	-	0	Parent=comp150082_c0_seq1.mrna1
Chr1	gffcl	locus	79325031	79325729	.	+	.	ID=RLOC_00009102;geneIDs=Dv_FBgn0209813.1.path5;transcripts=Dv_FBgn0209813.1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	79325031	79325729	.	+	.	ID=Dv_FBgn0209813.1.mrna5;geneID=Dv_FBgn0209813.1.path5;Name=Dv_FBgn0209813.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=696;mismatches=3;indels=0;unknowns=0;Target=Dv_FBgn0209813.1 699 1 .;locus=RLOC_00009102
Chr1	stalkie_big_nohaplotig	exon	79325031	79325729	99	+	.	Parent=Dv_FBgn0209813.1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	79325031	79325729	.	+	0	Parent=Dv_FBgn0209813.1.mrna5
Chr1	gffcl	locus	79326530	79327662	.	-	.	ID=RLOC_00009103;geneIDs=comp163325_c0_seq1.path4;transcripts=comp163325_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	79326530	79327662	.	-	.	ID=comp163325_c0_seq1.mrna4;geneID=comp163325_c0_seq1.path4;Name=comp163325_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1131;mismatches=2;indels=0;unknowns=0;Target=comp163325_c0_seq1 1133 1 .;CDS_Target=comp163325_c0_seq1 255 1 .;locus=RLOC_00009103
Chr1	stalkie_big_nohaplotig	exon	79326530	79327662	99	-	.	Parent=comp163325_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	79327408	79327662	.	-	0	Parent=comp163325_c0_seq1.mrna4
Chr1	gffcl	locus	79387345	79388498	.	+	.	ID=RLOC_00009104;geneIDs=comp163261_c0_seq1.path4;transcripts=comp163261_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	79387345	79388498	.	+	.	ID=comp163261_c0_seq1.mrna4;geneID=comp163261_c0_seq1.path4;Name=comp163261_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=1135;mismatches=19;indels=0;unknowns=0;Target=comp163261_c0_seq1 1154 1 .;CDS_Target=comp163261_c0_seq1 953 114 .;locus=RLOC_00009104
Chr1	stalkie_big_nohaplotig	exon	79387345	79388498	98	+	.	Parent=comp163261_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	79387458	79388297	.	+	0	Parent=comp163261_c0_seq1.mrna4
Chr1	gffcl	locus	79457604	79675330	.	+	.	ID=RLOC_00009105;geneIDs=FBgn0029756.1.path1,comp158199_c6_seq1.path1;transcripts=comp158199_c6_seq1.mrna1,FBgn0029756.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	79457604	79675330	.	+	.	ID=comp158199_c6_seq1.mrna1;geneID=comp158199_c6_seq1.path1;Name=comp158199_c6_seq1;Dir=antisensecoverage=82.6;identity=98.1;matches=3027;mismatches=42;indels=17;unknowns=0;locus=RLOC_00009105
Chr1	stalkie_big_nohaplotig	exon	79457604	79458959	99	+	.	Parent=comp158199_c6_seq1.mrna1;Target=comp158199_c6_seq1 2475 3830 -
Chr1	stalkie_big_nohaplotig	exon	79459014	79460566	99	+	.	Parent=comp158199_c6_seq1.mrna1;Target=comp158199_c6_seq1 922 2474 -
Chr1	stalkie_big_nohaplotig	exon	79608534	79608551	77	+	.	Parent=comp158199_c6_seq1.mrna1;Target=comp158199_c6_seq1 905 921 -
Chr1	stalkie_big_nohaplotig	exon	79609378	79609384	100	+	.	Parent=comp158199_c6_seq1.mrna1;Target=comp158199_c6_seq1 898 904 -
Chr1	stalkie_big_nohaplotig	exon	79610050	79610058	100	+	.	Parent=comp158199_c6_seq1.mrna1;Target=comp158199_c6_seq1 889 897 -
Chr1	stalkie_big_nohaplotig	exon	79623791	79623795	100	+	.	Parent=comp158199_c6_seq1.mrna1;Target=comp158199_c6_seq1 884 888 -
Chr1	stalkie_big_nohaplotig	exon	79625905	79625912	100	+	.	Parent=comp158199_c6_seq1.mrna1;Target=comp158199_c6_seq1 876 883 -
Chr1	stalkie_big_nohaplotig	exon	79634168	79634220	50	+	.	Parent=comp158199_c6_seq1.mrna1;Target=comp158199_c6_seq1 821 875 -
Chr1	stalkie_big_nohaplotig	exon	79656197	79656206	80	+	.	Parent=comp158199_c6_seq1.mrna1;Target=comp158199_c6_seq1 812 820 -
Chr1	stalkie_big_nohaplotig	exon	79660256	79660263	100	+	.	Parent=comp158199_c6_seq1.mrna1;Target=comp158199_c6_seq1 804 811 -
Chr1	stalkie_big_nohaplotig	exon	79667060	79667062	100	+	.	Parent=comp158199_c6_seq1.mrna1;Target=comp158199_c6_seq1 801 803 -
Chr1	stalkie_big_nohaplotig	exon	79671049	79671051	100	+	.	Parent=comp158199_c6_seq1.mrna1;Target=comp158199_c6_seq1 798 800 -
Chr1	stalkie_big_nohaplotig	exon	79671063	79671070	100	+	.	Parent=comp158199_c6_seq1.mrna1;Target=comp158199_c6_seq1 755 762 -
Chr1	stalkie_big_nohaplotig	exon	79673783	79673803	50	+	.	Parent=comp158199_c6_seq1.mrna1;Target=comp158199_c6_seq1 723 754 -
Chr1	stalkie_big_nohaplotig	exon	79675322	79675330	100	+	.	Parent=comp158199_c6_seq1.mrna1;Target=comp158199_c6_seq1 649 657 -
Chr1	stalkie_big_nohaplotig	CDS	79458105	79458959	.	+	0	Parent=comp158199_c6_seq1.mrna1;Target=comp158199_c6_seq1 2475 3329 .
Chr1	stalkie_big_nohaplotig	CDS	79459014	79459796	.	+	0	Parent=comp158199_c6_seq1.mrna1;Target=comp158199_c6_seq1 1692 2474 .
Chr1	stalkie_big_nohaplotig	mRNA	79457836	79459793	.	+	.	ID=FBgn0029756.1.mrna1;geneID=FBgn0029756.1.path1;Name=FBgn0029756.1;Dir=sensecoverage=100.0;identity=99.9;matches=1849;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009105
Chr1	stalkie_big_nohaplotig	exon	79457836	79458033	100	+	.	Parent=FBgn0029756.1.mrna1;Target=FBgn0029756.1 1 198 +
Chr1	stalkie_big_nohaplotig	exon	79458087	79458959	99	+	.	Parent=FBgn0029756.1.mrna1;Target=FBgn0029756.1 199 1071 +
Chr1	stalkie_big_nohaplotig	exon	79459014	79459793	99	+	.	Parent=FBgn0029756.1.mrna1;Target=FBgn0029756.1 1072 1851 +
Chr1	stalkie_big_nohaplotig	CDS	79457836	79458033	.	+	0	Parent=FBgn0029756.1.mrna1;Target=FBgn0029756.1 1 198 +
Chr1	stalkie_big_nohaplotig	CDS	79458087	79458959	.	+	0	Parent=FBgn0029756.1.mrna1;Target=FBgn0029756.1 199 1071 +
Chr1	stalkie_big_nohaplotig	CDS	79459014	79459793	.	+	0	Parent=FBgn0029756.1.mrna1;Target=FBgn0029756.1 1072 1851 +
Chr1	gffcl	locus	79464553	79466305	.	+	.	ID=RLOC_00009106;geneIDs=Dp_FBgn0250603.path1,comp163088_c0_seq1.path2;transcripts=comp163088_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	79464553	79466305	.	+	.	ID=comp163088_c0_seq1.mrna2;geneID=comp163088_c0_seq1.path2;Name=comp163088_c0_seq1;Dir=indeterminatecoverage=94.0;identity=97.3;matches=1724;mismatches=23;indels=25;unknowns=0;Target=comp163088_c0_seq1 1854 89 .;CDS_Target=comp163088_c0_seq1 938 123 .;locus=RLOC_00009106
Chr1	stalkie_big_nohaplotig	exon	79464553	79466305	97	+	.	Parent=comp163088_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	79464587	79465402	.	+	0	Parent=comp163088_c0_seq1.mrna2
Chr1	gffcl	locus	79560133	79598590	.	-	.	ID=RLOC_00009107;geneIDs=FBgn0029761.1.path1;transcripts=FBgn0029761.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	79560133	79598590	.	-	.	ID=FBgn0029761.1.mrna1;geneID=FBgn0029761.1.path1;Name=FBgn0029761.1;Dir=sensecoverage=25.9;identity=98.5;matches=386;mismatches=3;indels=3;unknowns=0;locus=RLOC_00009107
Chr1	stalkie_big_nohaplotig	exon	79560133	79560302	100	-	.	Parent=FBgn0029761.1.mrna1;Target=FBgn0029761.1 1477 1646 +
Chr1	stalkie_big_nohaplotig	exon	79560364	79560465	100	-	.	Parent=FBgn0029761.1.mrna1;Target=FBgn0029761.1 1375 1476 +
Chr1	stalkie_big_nohaplotig	exon	79585892	79585961	100	-	.	Parent=FBgn0029761.1.mrna1;Target=FBgn0029761.1 1305 1374 +
Chr1	stalkie_big_nohaplotig	exon	79587047	79587054	100	-	.	Parent=FBgn0029761.1.mrna1;Target=FBgn0029761.1 1276 1283 +
Chr1	stalkie_big_nohaplotig	exon	79587089	79587097	100	-	.	Parent=FBgn0029761.1.mrna1;Target=FBgn0029761.1 1211 1219 +
Chr1	stalkie_big_nohaplotig	exon	79590364	79590370	85	-	.	Parent=FBgn0029761.1.mrna1;Target=FBgn0029761.1 1204 1210 +
Chr1	stalkie_big_nohaplotig	exon	79592381	79592398	76	-	.	Parent=FBgn0029761.1.mrna1;Target=FBgn0029761.1 1183 1203 +
Chr1	stalkie_big_nohaplotig	exon	79598587	79598590	100	-	.	Parent=FBgn0029761.1.mrna1;Target=FBgn0029761.1 1179 1182 +
Chr1	stalkie_big_nohaplotig	CDS	79560135	79560302	.	-	0	Parent=FBgn0029761.1.mrna1;Target=FBgn0029761.1 1477 1644 +
Chr1	stalkie_big_nohaplotig	CDS	79560364	79560465	.	-	0	Parent=FBgn0029761.1.mrna1;Target=FBgn0029761.1 1375 1476 +
Chr1	stalkie_big_nohaplotig	CDS	79585892	79585945	.	-	0	Parent=FBgn0029761.1.mrna1;Target=FBgn0029761.1 1321 1374 +
Chr1	gffcl	locus	79742799	79743723	.	-	.	ID=RLOC_00009108;geneIDs=comp163978_c0_seq1.path1;transcripts=comp163978_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	79742799	79743723	.	-	.	ID=comp163978_c0_seq1.mrna1;geneID=comp163978_c0_seq1.path1;Name=comp163978_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.2;matches=913;mismatches=12;indels=5;unknowns=0;Target=comp163978_c0_seq1 930 1 .;CDS_Target=comp163978_c0_seq1 786 466 .;locus=RLOC_00009108
Chr1	stalkie_big_nohaplotig	exon	79742799	79743723	98	-	.	Parent=comp163978_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	79742941	79743258	.	-	0	Parent=comp163978_c0_seq1.mrna1
Chr1	gffcl	locus	79746851	79747168	.	+	.	ID=RLOC_00009109;geneIDs=Dp_FBgn0250085.path2;transcripts=Dp_FBgn0250085.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	79746851	79747168	.	+	.	ID=Dp_FBgn0250085.mrna2;geneID=Dp_FBgn0250085.path2;Name=Dp_FBgn0250085;Dir=indeterminatecoverage=100.0;identity=100.0;matches=318;mismatches=0;indels=0;unknowns=0;Target=Dp_FBgn0250085 318 1 .;locus=RLOC_00009109
Chr1	stalkie_big_nohaplotig	exon	79746851	79747168	100	+	.	Parent=Dp_FBgn0250085.mrna2
Chr1	stalkie_big_nohaplotig	CDS	79746851	79747168	.	+	0	Parent=Dp_FBgn0250085.mrna2
Chr1	gffcl	locus	79762057	81180120	.	+	.	ID=RLOC_00009110;geneIDs=comp153183_c1_seq1.path4;transcripts=comp153183_c1_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	79762057	81180120	.	+	.	ID=comp153183_c1_seq1.mrna4;geneID=comp153183_c1_seq1.path4;Name=comp153183_c1_seq1;Dir=indeterminatecoverage=85.7;identity=99.3;matches=1217;mismatches=7;indels=1;unknowns=0;Target=comp153183_c1_seq1 1145 3 .;locus=RLOC_00009110
Chr1	stalkie_big_nohaplotig	exon	79762057	79763279	99	+	.	Parent=comp153183_c1_seq1.mrna4;Target=comp153183_c1_seq1 1222 1 .
Chr1	stalkie_big_nohaplotig	exon	81180119	81180120	100	+	.	Parent=comp153183_c1_seq1.mrna4;Target=comp153183_c1_seq1 1224 1223 .
Chr1	stalkie_big_nohaplotig	CDS	79762059	79763201	.	+	0	Parent=comp153183_c1_seq1.mrna4
Chr1	gffcl	locus	79908371	79909121	.	-	.	ID=RLOC_00009112;geneIDs=comp157310_c1_seq1.path3;transcripts=comp157310_c1_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	79908371	79909121	.	-	.	ID=comp157310_c1_seq1.mrna3;geneID=comp157310_c1_seq1.path3;Name=comp157310_c1_seq1;Dir=indeterminatecoverage=100.0;identity=96.8;matches=730;mismatches=20;indels=4;unknowns=0;Target=comp157310_c1_seq1 753 1 .;CDS_Target=comp157310_c1_seq1 88 2 .;locus=RLOC_00009112
Chr1	stalkie_big_nohaplotig	exon	79908371	79909121	96	-	.	Parent=comp157310_c1_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	79909034	79909120	.	-	0	Parent=comp157310_c1_seq1.mrna3
Chr1	gffcl	locus	79937576	79937893	.	-	.	ID=RLOC_00009113;geneIDs=Dp_FBgn0250085.path5;transcripts=Dp_FBgn0250085.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	79937576	79937893	.	-	.	ID=Dp_FBgn0250085.mrna5;geneID=Dp_FBgn0250085.path5;Name=Dp_FBgn0250085;Dir=indeterminatecoverage=100.0;identity=99.7;matches=317;mismatches=1;indels=0;unknowns=0;Target=Dp_FBgn0250085 318 1 .;locus=RLOC_00009113
Chr1	stalkie_big_nohaplotig	exon	79937576	79937893	99	-	.	Parent=Dp_FBgn0250085.mrna5
Chr1	stalkie_big_nohaplotig	CDS	79937576	79937893	.	-	0	Parent=Dp_FBgn0250085.mrna5
Chr1	gffcl	locus	79995863	80055826	.	-	.	ID=RLOC_00009114;geneIDs=comp161686_c0_seq1.path1;transcripts=comp161686_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	79995863	80055826	.	-	.	ID=comp161686_c0_seq1.mrna1;geneID=comp161686_c0_seq1.path1;Name=comp161686_c0_seq1;Dir=indeterminatecoverage=79.5;identity=78.7;matches=2278;mismatches=229;indels=387;unknowns=0;Target=comp161686_c0_seq1 2052 1849 .;locus=RLOC_00009114
Chr1	stalkie_big_nohaplotig	exon	79995863	79996569	73	-	.	Parent=comp161686_c0_seq1.mrna1;Target=comp161686_c0_seq1 3395 2690 .
Chr1	stalkie_big_nohaplotig	exon	79996675	79997318	80	-	.	Parent=comp161686_c0_seq1.mrna1;Target=comp161686_c0_seq1 2688 2134 .
Chr1	stalkie_big_nohaplotig	exon	80002014	80002056	61	-	.	Parent=comp161686_c0_seq1.mrna1;Target=comp161686_c0_seq1 2133 2080 .
Chr1	stalkie_big_nohaplotig	exon	80054374	80054683	85	-	.	Parent=comp161686_c0_seq1.mrna1;Target=comp161686_c0_seq1 2079 1802 .
Chr1	stalkie_big_nohaplotig	exon	80054697	80055019	88	-	.	Parent=comp161686_c0_seq1.mrna1;Target=comp161686_c0_seq1 1801 1484 .
Chr1	stalkie_big_nohaplotig	exon	80055124	80055426	65	-	.	Parent=comp161686_c0_seq1.mrna1;Target=comp161686_c0_seq1 1483 1076 .
Chr1	stalkie_big_nohaplotig	exon	80055454	80055826	88	-	.	Parent=comp161686_c0_seq1.mrna1;Target=comp161686_c0_seq1 1059 681 .
Chr1	stalkie_big_nohaplotig	CDS	80054401	80054636	.	-	0	Parent=comp161686_c0_seq1.mrna1
Chr1	gffcl	locus	80018060	80020500	.	-	.	ID=RLOC_00009115;geneIDs=comp163399_c0_seq1.path2;transcripts=comp163399_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	80018060	80020500	.	-	.	ID=comp163399_c0_seq1.mrna2;geneID=comp163399_c0_seq1.path2;Name=comp163399_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.9;matches=2379;mismatches=47;indels=28;unknowns=0;Target=comp163399_c0_seq1 2439 1 .;CDS_Target=comp163399_c0_seq1 1169 984 .;locus=RLOC_00009115
Chr1	stalkie_big_nohaplotig	exon	80018060	80020500	96	-	.	Parent=comp163399_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	80019318	80019503	.	-	0	Parent=comp163399_c0_seq1.mrna2
Chr1	gffcl	locus	80203586	80224251	.	-	.	ID=RLOC_00009117;geneIDs=FBgn0015615.1.path1;transcripts=FBgn0015615.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	80203586	80224251	.	-	.	ID=FBgn0015615.1.mrna1;geneID=FBgn0015615.1.path1;Name=FBgn0015615.1;Dir=sensecoverage=91.6;identity=99.8;matches=2285;mismatches=3;indels=1;unknowns=0;Target=FBgn0015615.1 3 74 +;locus=RLOC_00009117
Chr1	stalkie_big_nohaplotig	exon	80203586	80204318	99	-	.	Parent=FBgn0015615.1.mrna1;Target=FBgn0015615.1 1557 2289 +
Chr1	stalkie_big_nohaplotig	exon	80222697	80224251	99	-	.	Parent=FBgn0015615.1.mrna1;Target=FBgn0015615.1 1 1556 +
Chr1	stalkie_big_nohaplotig	CDS	80224179	80224249	.	-	0	Parent=FBgn0015615.1.mrna1
Chr1	gffcl	locus	80248173	80429936	.	-	.	ID=RLOC_00009118;geneIDs=FBgn0045035.1.path1,comp156025_c0_seq1.path1;transcripts=comp156025_c0_seq1.mrna1,FBgn0045035.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	80248173	80429936	.	-	.	ID=comp156025_c0_seq1.mrna1;geneID=comp156025_c0_seq1.path1;Name=comp156025_c0_seq1;Dir=sensecoverage=99.0;identity=97.8;matches=8481;mismatches=99;indels=96;unknowns=0;locus=RLOC_00009118
Chr1	stalkie_big_nohaplotig	exon	80248173	80249120	99	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 8432 9381 +
Chr1	stalkie_big_nohaplotig	exon	80255873	80256121	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 8183 8431 +
Chr1	stalkie_big_nohaplotig	exon	80256173	80256279	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 8076 8182 +
Chr1	stalkie_big_nohaplotig	exon	80256331	80256476	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 7930 8075 +
Chr1	stalkie_big_nohaplotig	exon	80256544	80256914	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 7559 7929 +
Chr1	stalkie_big_nohaplotig	exon	80256972	80257127	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 7403 7558 +
Chr1	stalkie_big_nohaplotig	exon	80257192	80257804	99	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 6790 7402 +
Chr1	stalkie_big_nohaplotig	exon	80257864	80258226	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 6427 6789 +
Chr1	stalkie_big_nohaplotig	exon	80264490	80264615	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 6301 6426 +
Chr1	stalkie_big_nohaplotig	exon	80264673	80264843	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 6130 6300 +
Chr1	stalkie_big_nohaplotig	exon	80264899	80265393	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 5635 6129 +
Chr1	stalkie_big_nohaplotig	exon	80308731	80308899	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 5466 5634 +
Chr1	stalkie_big_nohaplotig	exon	80308958	80309405	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 5018 5465 +
Chr1	stalkie_big_nohaplotig	exon	80316530	80316677	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 4870 5017 +
Chr1	stalkie_big_nohaplotig	exon	80316735	80316932	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 4672 4869 +
Chr1	stalkie_big_nohaplotig	exon	80318916	80319304	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 4283 4671 +
Chr1	stalkie_big_nohaplotig	exon	80319367	80319649	99	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 3999 4282 +
Chr1	stalkie_big_nohaplotig	exon	80319701	80320003	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 3696 3998 +
Chr1	stalkie_big_nohaplotig	exon	80322693	80322698	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 3690 3695 +
Chr1	stalkie_big_nohaplotig	exon	80322765	80322768	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 3671 3674 +
Chr1	stalkie_big_nohaplotig	exon	80322875	80322883	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 3662 3670 +
Chr1	stalkie_big_nohaplotig	exon	80326569	80326660	48	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 3456 3583 +
Chr1	stalkie_big_nohaplotig	exon	80337159	80337168	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 3343 3352 +
Chr1	stalkie_big_nohaplotig	exon	80338628	80338638	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 3235 3245 +
Chr1	stalkie_big_nohaplotig	exon	80340165	80340174	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 3211 3220 +
Chr1	stalkie_big_nohaplotig	exon	80341324	80341334	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 3200 3210 +
Chr1	stalkie_big_nohaplotig	exon	80343349	80343351	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 3197 3199 +
Chr1	stalkie_big_nohaplotig	exon	80343805	80343808	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 3168 3171 +
Chr1	stalkie_big_nohaplotig	exon	80343862	80343869	87	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 3160 3167 +
Chr1	stalkie_big_nohaplotig	exon	80343968	80343976	77	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 3151 3159 +
Chr1	stalkie_big_nohaplotig	exon	80344202	80344210	77	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 3142 3150 +
Chr1	stalkie_big_nohaplotig	exon	80344266	80344270	80	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 3137 3141 +
Chr1	stalkie_big_nohaplotig	exon	80344458	80344469	83	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 3125 3136 +
Chr1	stalkie_big_nohaplotig	exon	80352163	80352164	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 3123 3124 +
Chr1	stalkie_big_nohaplotig	exon	80355049	80355056	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 3082 3089 +
Chr1	stalkie_big_nohaplotig	exon	80355058	80355110	59	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 3003 3053 +
Chr1	stalkie_big_nohaplotig	exon	80355706	80355723	77	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 2985 3002 +
Chr1	stalkie_big_nohaplotig	exon	80355899	80355930	64	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 2953 2984 +
Chr1	stalkie_big_nohaplotig	exon	80355939	80355947	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 2899 2907 +
Chr1	stalkie_big_nohaplotig	exon	80356888	80356890	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 2896 2898 +
Chr1	stalkie_big_nohaplotig	exon	80357356	80357392	56	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 2758 2793 +
Chr1	stalkie_big_nohaplotig	exon	80359814	80359823	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 2748 2757 +
Chr1	stalkie_big_nohaplotig	exon	80363223	80363229	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 2741 2747 +
Chr1	stalkie_big_nohaplotig	exon	80371026	80371059	63	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 2707 2740 +
Chr1	stalkie_big_nohaplotig	exon	80379021	80379030	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 2690 2699 +
Chr1	stalkie_big_nohaplotig	exon	80379032	80379044	92	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 2633 2645 +
Chr1	stalkie_big_nohaplotig	exon	80385470	80385477	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 2609 2616 +
Chr1	stalkie_big_nohaplotig	exon	80385497	80385505	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 2589 2597 +
Chr1	stalkie_big_nohaplotig	exon	80385777	80385781	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 2584 2588 +
Chr1	stalkie_big_nohaplotig	exon	80391175	80391178	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 2505 2508 +
Chr1	stalkie_big_nohaplotig	exon	80395116	80395120	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 2500 2504 +
Chr1	stalkie_big_nohaplotig	exon	80395335	80396332	96	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 1472 2499 +
Chr1	stalkie_big_nohaplotig	exon	80428159	80428280	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 1350 1471 +
Chr1	stalkie_big_nohaplotig	exon	80428334	80428567	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 1116 1349 +
Chr1	stalkie_big_nohaplotig	exon	80428640	80428738	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 1017 1115 +
Chr1	stalkie_big_nohaplotig	exon	80428791	80429011	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 796 1016 +
Chr1	stalkie_big_nohaplotig	exon	80429076	80429237	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 634 795 +
Chr1	stalkie_big_nohaplotig	exon	80429285	80429396	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 522 633 +
Chr1	stalkie_big_nohaplotig	exon	80429450	80429936	100	-	.	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 35 521 +
Chr1	stalkie_big_nohaplotig	CDS	80319519	80319649	.	-	0	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 3999 4130 +
Chr1	stalkie_big_nohaplotig	CDS	80319701	80319958	.	-	0	Parent=comp156025_c0_seq1.mrna1;Target=comp156025_c0_seq1 3741 3998 +
Chr1	stalkie_big_nohaplotig	mRNA	80248942	80429665	.	-	.	ID=FBgn0045035.1.mrna1;geneID=FBgn0045035.1.path1;Name=FBgn0045035.1;Dir=sensecoverage=100.0;identity=95.3;matches=7370;mismatches=89;indels=275;unknowns=0;locus=RLOC_00009118
Chr1	stalkie_big_nohaplotig	exon	80248942	80249120	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 8009 8187 +
Chr1	stalkie_big_nohaplotig	exon	80255873	80256121	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 7760 8008 +
Chr1	stalkie_big_nohaplotig	exon	80256173	80256279	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 7653 7759 +
Chr1	stalkie_big_nohaplotig	exon	80256331	80256476	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 7507 7652 +
Chr1	stalkie_big_nohaplotig	exon	80256544	80256914	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 7136 7506 +
Chr1	stalkie_big_nohaplotig	exon	80256972	80257127	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 6980 7135 +
Chr1	stalkie_big_nohaplotig	exon	80257192	80257804	99	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 6367 6979 +
Chr1	stalkie_big_nohaplotig	exon	80257864	80258226	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 6004 6366 +
Chr1	stalkie_big_nohaplotig	exon	80264490	80264615	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 5878 6003 +
Chr1	stalkie_big_nohaplotig	exon	80264673	80264843	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 5707 5877 +
Chr1	stalkie_big_nohaplotig	exon	80264899	80265393	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 5212 5706 +
Chr1	stalkie_big_nohaplotig	exon	80308731	80308899	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 5043 5211 +
Chr1	stalkie_big_nohaplotig	exon	80308958	80309405	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 4595 5042 +
Chr1	stalkie_big_nohaplotig	exon	80316530	80316677	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 4447 4594 +
Chr1	stalkie_big_nohaplotig	exon	80316735	80316932	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 4249 4446 +
Chr1	stalkie_big_nohaplotig	exon	80318916	80319304	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 3860 4248 +
Chr1	stalkie_big_nohaplotig	exon	80319367	80319448	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 3778 3859 +
Chr1	stalkie_big_nohaplotig	exon	80319566	80319649	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 3694 3777 +
Chr1	stalkie_big_nohaplotig	exon	80319701	80320003	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 3391 3693 +
Chr1	stalkie_big_nohaplotig	exon	80322693	80322698	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 3385 3390 +
Chr1	stalkie_big_nohaplotig	exon	80322765	80322768	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 3366 3369 +
Chr1	stalkie_big_nohaplotig	exon	80322875	80322883	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 3357 3365 +
Chr1	stalkie_big_nohaplotig	exon	80326569	80326576	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 3271 3278 +
Chr1	stalkie_big_nohaplotig	exon	80326608	80326660	55	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 3151 3215 +
Chr1	stalkie_big_nohaplotig	exon	80337159	80337168	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 3038 3047 +
Chr1	stalkie_big_nohaplotig	exon	80337211	80337218	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2990 2997 +
Chr1	stalkie_big_nohaplotig	exon	80339889	80339905	70	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2916 2931 +
Chr1	stalkie_big_nohaplotig	exon	80340165	80340174	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2906 2915 +
Chr1	stalkie_big_nohaplotig	exon	80341324	80341334	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2895 2905 +
Chr1	stalkie_big_nohaplotig	exon	80343349	80343351	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2892 2894 +
Chr1	stalkie_big_nohaplotig	exon	80343684	80343720	18	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2885 2891 +
Chr1	stalkie_big_nohaplotig	exon	80343848	80343872	64	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2868 2884 +
Chr1	stalkie_big_nohaplotig	exon	80344005	80344056	23	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2854 2867 +
Chr1	stalkie_big_nohaplotig	exon	80344238	80344241	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2850 2853 +
Chr1	stalkie_big_nohaplotig	exon	80344406	80344469	30	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2820 2849 +
Chr1	stalkie_big_nohaplotig	exon	80352163	80352164	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2818 2819 +
Chr1	stalkie_big_nohaplotig	exon	80355049	80355056	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2777 2784 +
Chr1	stalkie_big_nohaplotig	exon	80355058	80355103	54	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2705 2748 +
Chr1	stalkie_big_nohaplotig	exon	80355879	80355930	61	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2648 2704 +
Chr1	stalkie_big_nohaplotig	exon	80355939	80355996	53	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2536 2602 +
Chr1	stalkie_big_nohaplotig	exon	80356112	80356127	75	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2523 2535 +
Chr1	stalkie_big_nohaplotig	exon	80356485	80356493	88	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2514 2522 +
Chr1	stalkie_big_nohaplotig	exon	80356810	80356858	26	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2501 2513 +
Chr1	stalkie_big_nohaplotig	exon	80356944	80356947	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2497 2500 +
Chr1	stalkie_big_nohaplotig	exon	80357151	80357156	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2491 2496 +
Chr1	stalkie_big_nohaplotig	exon	80357230	80357239	90	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2481 2490 +
Chr1	stalkie_big_nohaplotig	exon	80357301	80357399	28	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2446 2480 +
Chr1	stalkie_big_nohaplotig	exon	80358065	80358071	38	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2428 2445 +
Chr1	stalkie_big_nohaplotig	exon	80371045	80371054	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2411 2420 +
Chr1	stalkie_big_nohaplotig	exon	80371067	80371075	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2386 2394 +
Chr1	stalkie_big_nohaplotig	exon	80379032	80379040	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2332 2340 +
Chr1	stalkie_big_nohaplotig	exon	80381585	80381592	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2237 2244 +
Chr1	stalkie_big_nohaplotig	exon	80391102	80391107	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2231 2236 +
Chr1	stalkie_big_nohaplotig	exon	80393656	80393664	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2203 2211 +
Chr1	stalkie_big_nohaplotig	exon	80395113	80395120	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 2195 2202 +
Chr1	stalkie_big_nohaplotig	exon	80395363	80396332	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 1167 2136 +
Chr1	stalkie_big_nohaplotig	exon	80428159	80428280	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 1045 1166 +
Chr1	stalkie_big_nohaplotig	exon	80428334	80428567	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 811 1044 +
Chr1	stalkie_big_nohaplotig	exon	80428640	80428738	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 712 810 +
Chr1	stalkie_big_nohaplotig	exon	80428791	80429011	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 491 711 +
Chr1	stalkie_big_nohaplotig	exon	80429076	80429237	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 329 490 +
Chr1	stalkie_big_nohaplotig	exon	80429285	80429396	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 217 328 +
Chr1	stalkie_big_nohaplotig	exon	80429450	80429665	100	-	.	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 1 216 +
Chr1	stalkie_big_nohaplotig	CDS	80248942	80249120	.	-	2	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 8009 8187 +
Chr1	stalkie_big_nohaplotig	CDS	80255873	80256121	.	-	2	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 7760 8008 +
Chr1	stalkie_big_nohaplotig	CDS	80256173	80256279	.	-	1	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 7653 7759 +
Chr1	stalkie_big_nohaplotig	CDS	80256331	80256476	.	-	0	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 7507 7652 +
Chr1	stalkie_big_nohaplotig	CDS	80256544	80256914	.	-	2	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 7136 7506 +
Chr1	stalkie_big_nohaplotig	CDS	80256972	80257127	.	-	2	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 6980 7135 +
Chr1	stalkie_big_nohaplotig	CDS	80257192	80257804	.	-	0	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 6367 6979 +
Chr1	stalkie_big_nohaplotig	CDS	80257864	80258226	.	-	0	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 6004 6366 +
Chr1	stalkie_big_nohaplotig	CDS	80264490	80264615	.	-	0	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 5878 6003 +
Chr1	stalkie_big_nohaplotig	CDS	80264673	80264843	.	-	0	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 5707 5877 +
Chr1	stalkie_big_nohaplotig	CDS	80264899	80265393	.	-	0	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 5212 5706 +
Chr1	stalkie_big_nohaplotig	CDS	80308731	80308899	.	-	1	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 5043 5211 +
Chr1	stalkie_big_nohaplotig	CDS	80308958	80309405	.	-	2	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 4595 5042 +
Chr1	stalkie_big_nohaplotig	CDS	80316530	80316677	.	-	0	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 4447 4594 +
Chr1	stalkie_big_nohaplotig	CDS	80316735	80316932	.	-	0	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 4249 4446 +
Chr1	stalkie_big_nohaplotig	CDS	80318916	80319304	.	-	2	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 3860 4248 +
Chr1	stalkie_big_nohaplotig	CDS	80319367	80319448	.	-	0	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 3778 3859 +
Chr1	stalkie_big_nohaplotig	CDS	80319566	80319649	.	-	0	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 3694 3777 +
Chr1	stalkie_big_nohaplotig	CDS	80319701	80319958	.	-	0	Parent=FBgn0045035.1.mrna1;Target=FBgn0045035.1 3436 3693 +
Chr1	gffcl	locus	80249519	80249830	.	-	.	ID=RLOC_00009119;geneIDs=comp157677_c0_seq1.path1;transcripts=comp157677_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	80249519	80249830	.	-	.	ID=comp157677_c0_seq1.mrna1;geneID=comp157677_c0_seq1.path1;Name=comp157677_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=310;mismatches=2;indels=0;unknowns=0;Target=comp157677_c0_seq1 312 1 .;CDS_Target=comp157677_c0_seq1 91 2 .;locus=RLOC_00009119
Chr1	stalkie_big_nohaplotig	exon	80249519	80249830	99	-	.	Parent=comp157677_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	80249740	80249829	.	-	0	Parent=comp157677_c0_seq1.mrna1
Chr1	gffcl	locus	80469209	80469520	.	+	.	ID=RLOC_00009122;geneIDs=comp157677_c0_seq1.path2;transcripts=comp157677_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	80469209	80469520	.	+	.	ID=comp157677_c0_seq1.mrna2;geneID=comp157677_c0_seq1.path2;Name=comp157677_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=310;mismatches=2;indels=0;unknowns=0;Target=comp157677_c0_seq1 312 1 .;CDS_Target=comp157677_c0_seq1 91 2 .;locus=RLOC_00009122
Chr1	stalkie_big_nohaplotig	exon	80469209	80469520	99	+	.	Parent=comp157677_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	80469210	80469299	.	+	0	Parent=comp157677_c0_seq1.mrna2
Chr1	gffcl	locus	80614024	80636266	.	-	.	ID=RLOC_00009123;geneIDs=comp163753_c7_seq1.path2;transcripts=comp163753_c7_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	80614024	80636266	.	-	.	ID=comp163753_c7_seq1.mrna2;geneID=comp163753_c7_seq1.path2;Name=comp163753_c7_seq1;Dir=indeterminatecoverage=99.9;identity=99.5;matches=3043;mismatches=12;indels=2;unknowns=0;locus=RLOC_00009123
Chr1	stalkie_big_nohaplotig	exon	80614024	80615705	99	-	.	Parent=comp163753_c7_seq1.mrna2;Target=comp163753_c7_seq1 3058 1376 .
Chr1	stalkie_big_nohaplotig	exon	80634894	80636266	99	-	.	Parent=comp163753_c7_seq1.mrna2;Target=comp163753_c7_seq1 1375 2 .
Chr1	stalkie_big_nohaplotig	CDS	80614392	80615705	.	-	1	Parent=comp163753_c7_seq1.mrna2;Target=comp163753_c7_seq1 2690 1376 .
Chr1	stalkie_big_nohaplotig	CDS	80634894	80634916	.	-	0	Parent=comp163753_c7_seq1.mrna2;Target=comp163753_c7_seq1 1375 1353 .
Chr1	gffcl	locus	80614024	80636266	.	+	.	ID=RLOC_00009124;geneIDs=comp163753_c7_seq1.path1;transcripts=comp163753_c7_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	80614024	80636266	.	+	.	ID=comp163753_c7_seq1.mrna1;geneID=comp163753_c7_seq1.path1;Name=comp163753_c7_seq1;Dir=indeterminatecoverage=99.9;identity=99.5;matches=3043;mismatches=12;indels=2;unknowns=0;locus=RLOC_00009124
Chr1	stalkie_big_nohaplotig	exon	80614024	80615397	99	+	.	Parent=comp163753_c7_seq1.mrna1;Target=comp163753_c7_seq1 1375 2 .
Chr1	stalkie_big_nohaplotig	exon	80634586	80636266	99	+	.	Parent=comp163753_c7_seq1.mrna1;Target=comp163753_c7_seq1 3058 1376 .
Chr1	stalkie_big_nohaplotig	CDS	80615375	80615397	.	+	0	Parent=comp163753_c7_seq1.mrna1;Target=comp163753_c7_seq1 1375 1353 .
Chr1	stalkie_big_nohaplotig	CDS	80634586	80635898	.	+	1	Parent=comp163753_c7_seq1.mrna1;Target=comp163753_c7_seq1 2690 1376 .
Chr1	gffcl	locus	80658780	80659177	.	-	.	ID=RLOC_00009125;geneIDs=comp118784_c1_seq1.path1;transcripts=comp118784_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	80658780	80659177	.	-	.	ID=comp118784_c1_seq1.mrna1;geneID=comp118784_c1_seq1.path1;Name=comp118784_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=398;mismatches=0;indels=0;unknowns=0;Target=comp118784_c1_seq1 398 1 .;CDS_Target=comp118784_c1_seq1 264 40 .;locus=RLOC_00009125
Chr1	stalkie_big_nohaplotig	exon	80658780	80659177	100	-	.	Parent=comp118784_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	80658914	80659138	.	-	0	Parent=comp118784_c1_seq1.mrna1
Chr1	gffcl	locus	80791228	80837245	.	+	.	ID=RLOC_00009126;geneIDs=FBgn0052702.1.path1;transcripts=FBgn0052702.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	80791228	80837245	.	+	.	ID=FBgn0052702.1.mrna1;geneID=FBgn0052702.1.path1;Name=FBgn0052702.1;Dir=sensecoverage=86.7;identity=100.0;matches=9573;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009126
Chr1	stalkie_big_nohaplotig	exon	80791228	80791707	100	+	.	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 565 1044 +
Chr1	stalkie_big_nohaplotig	exon	80791763	80792014	100	+	.	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 1045 1296 +
Chr1	stalkie_big_nohaplotig	exon	80792072	80792815	100	+	.	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 1297 2040 +
Chr1	stalkie_big_nohaplotig	exon	80792877	80793200	100	+	.	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 2041 2364 +
Chr1	stalkie_big_nohaplotig	exon	80793254	80793410	100	+	.	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 2365 2521 +
Chr1	stalkie_big_nohaplotig	exon	80793471	80793664	100	+	.	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 2522 2715 +
Chr1	stalkie_big_nohaplotig	exon	80793715	80794115	100	+	.	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 2716 3116 +
Chr1	stalkie_big_nohaplotig	exon	80794173	80794490	100	+	.	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 3117 3434 +
Chr1	stalkie_big_nohaplotig	exon	80794557	80795547	100	+	.	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 3435 4425 +
Chr1	stalkie_big_nohaplotig	exon	80795602	80795764	100	+	.	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 4426 4588 +
Chr1	stalkie_big_nohaplotig	exon	80831415	80831761	100	+	.	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 4589 4935 +
Chr1	stalkie_big_nohaplotig	exon	80831819	80832028	100	+	.	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 4936 5145 +
Chr1	stalkie_big_nohaplotig	exon	80832090	80832576	100	+	.	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 5146 5632 +
Chr1	stalkie_big_nohaplotig	exon	80832635	80832801	100	+	.	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 5633 5799 +
Chr1	stalkie_big_nohaplotig	exon	80832852	80837024	99	+	.	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 5800 9972 +
Chr1	stalkie_big_nohaplotig	exon	80837080	80837245	100	+	.	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 9973 10138 +
Chr1	stalkie_big_nohaplotig	CDS	80791228	80791707	.	+	0	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 565 1044 +
Chr1	stalkie_big_nohaplotig	CDS	80791763	80792014	.	+	0	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 1045 1296 +
Chr1	stalkie_big_nohaplotig	CDS	80792072	80792815	.	+	0	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 1297 2040 +
Chr1	stalkie_big_nohaplotig	CDS	80792877	80793200	.	+	0	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 2041 2364 +
Chr1	stalkie_big_nohaplotig	CDS	80793254	80793410	.	+	0	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 2365 2521 +
Chr1	stalkie_big_nohaplotig	CDS	80793471	80793664	.	+	2	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 2522 2715 +
Chr1	stalkie_big_nohaplotig	CDS	80793715	80794115	.	+	0	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 2716 3116 +
Chr1	stalkie_big_nohaplotig	CDS	80794173	80794490	.	+	1	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 3117 3434 +
Chr1	stalkie_big_nohaplotig	CDS	80794557	80795547	.	+	1	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 3435 4425 +
Chr1	stalkie_big_nohaplotig	CDS	80795602	80795764	.	+	0	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 4426 4588 +
Chr1	stalkie_big_nohaplotig	CDS	80831415	80831761	.	+	2	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 4589 4935 +
Chr1	stalkie_big_nohaplotig	CDS	80831819	80832028	.	+	0	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 4936 5145 +
Chr1	stalkie_big_nohaplotig	CDS	80832090	80832576	.	+	0	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 5146 5632 +
Chr1	stalkie_big_nohaplotig	CDS	80832635	80832801	.	+	2	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 5633 5799 +
Chr1	stalkie_big_nohaplotig	CDS	80832852	80837024	.	+	0	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 5800 9972 +
Chr1	stalkie_big_nohaplotig	CDS	80837080	80837244	.	+	0	Parent=FBgn0052702.1.mrna1;Target=FBgn0052702.1 9973 10137 +
Chr1	gffcl	locus	80901951	80903097	.	+	.	ID=RLOC_00009128;geneIDs=FBgn0262534.2.path6;transcripts=FBgn0262534.2.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	80901951	80903097	.	+	.	ID=FBgn0262534.2.mrna6;geneID=FBgn0262534.2.path6;Name=FBgn0262534.2;Dir=sensecoverage=100.0;identity=97.2;matches=1032;mismatches=3;indels=27;unknowns=0;locus=RLOC_00009128
Chr1	stalkie_big_nohaplotig	exon	80901951	80902084	99	+	.	Parent=FBgn0262534.2.mrna6;Target=FBgn0262534.2 1 134 +
Chr1	stalkie_big_nohaplotig	exon	80902139	80902565	99	+	.	Parent=FBgn0262534.2.mrna6;Target=FBgn0262534.2 135 561 +
Chr1	stalkie_big_nohaplotig	exon	80902624	80903097	94	+	.	Parent=FBgn0262534.2.mrna6;Target=FBgn0262534.2 562 1062 +
Chr1	stalkie_big_nohaplotig	CDS	80901951	80902084	.	+	0	Parent=FBgn0262534.2.mrna6;Target=FBgn0262534.2 1 134 +
Chr1	stalkie_big_nohaplotig	CDS	80902139	80902565	.	+	1	Parent=FBgn0262534.2.mrna6;Target=FBgn0262534.2 135 561 +
Chr1	stalkie_big_nohaplotig	CDS	80902624	80903097	.	+	0	Parent=FBgn0262534.2.mrna6;Target=FBgn0262534.2 562 1062 +
Chr1	gffcl	locus	80956363	80957327	.	+	.	ID=RLOC_00009129;geneIDs=comp163779_c0_seq1.path4;transcripts=comp163779_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	80956363	80957327	.	+	.	ID=comp163779_c0_seq1.mrna4;geneID=comp163779_c0_seq1.path4;Name=comp163779_c0_seq1;Dir=indeterminatecoverage=99.9;identity=94.1;matches=918;mismatches=47;indels=11;unknowns=0;Target=comp163779_c0_seq1 976 1 .;CDS_Target=comp163779_c0_seq1 368 165 .;locus=RLOC_00009129
Chr1	stalkie_big_nohaplotig	exon	80956363	80957327	94	+	.	Parent=comp163779_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	80956527	80956730	.	+	0	Parent=comp163779_c0_seq1.mrna4
Chr1	gffcl	locus	81003508	81052681	.	-	.	ID=RLOC_00009130;geneIDs=FBgn0025635.1.path1;transcripts=FBgn0025635.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	81003508	81052681	.	-	.	ID=FBgn0025635.1.mrna1;geneID=FBgn0025635.1.path1;Name=FBgn0025635.1;Dir=sensecoverage=100.0;identity=100.0;matches=1164;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009130
Chr1	stalkie_big_nohaplotig	exon	81003508	81003699	100	-	.	Parent=FBgn0025635.1.mrna1;Target=FBgn0025635.1 973 1164 +
Chr1	stalkie_big_nohaplotig	exon	81020069	81020131	100	-	.	Parent=FBgn0025635.1.mrna1;Target=FBgn0025635.1 910 972 +
Chr1	stalkie_big_nohaplotig	exon	81051720	81051973	100	-	.	Parent=FBgn0025635.1.mrna1;Target=FBgn0025635.1 656 909 +
Chr1	stalkie_big_nohaplotig	exon	81052027	81052681	100	-	.	Parent=FBgn0025635.1.mrna1;Target=FBgn0025635.1 1 655 +
Chr1	stalkie_big_nohaplotig	CDS	81003508	81003699	.	-	0	Parent=FBgn0025635.1.mrna1;Target=FBgn0025635.1 973 1164 +
Chr1	stalkie_big_nohaplotig	CDS	81020069	81020131	.	-	0	Parent=FBgn0025635.1.mrna1;Target=FBgn0025635.1 910 972 +
Chr1	stalkie_big_nohaplotig	CDS	81051720	81051973	.	-	2	Parent=FBgn0025635.1.mrna1;Target=FBgn0025635.1 656 909 +
Chr1	stalkie_big_nohaplotig	CDS	81052027	81052681	.	-	0	Parent=FBgn0025635.1.mrna1;Target=FBgn0025635.1 1 655 +
Chr1	gffcl	locus	81014047	81014766	.	+	.	ID=RLOC_00009131;geneIDs=comp155250_c0_seq1.path1;transcripts=comp155250_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	81014047	81014766	.	+	.	ID=comp155250_c0_seq1.mrna1;geneID=comp155250_c0_seq1.path1;Name=comp155250_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.2;matches=699;mismatches=21;indels=55;unknowns=0;Target=comp155250_c0_seq1 775 1 .;CDS_Target=comp155250_c0_seq1 157 2 .;locus=RLOC_00009131
Chr1	stalkie_big_nohaplotig	exon	81014047	81014766	90	+	.	Parent=comp155250_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	81014048	81014203	.	+	0	Parent=comp155250_c0_seq1.mrna1
Chr1	gffcl	locus	81161462	81162705	.	+	.	ID=RLOC_00009132;geneIDs=FBgn0030673.1.path1;transcripts=FBgn0030673.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	81161462	81162705	.	+	.	ID=FBgn0030673.1.mrna1;geneID=FBgn0030673.1.path1;Name=FBgn0030673.1;Dir=sensecoverage=100.0;identity=99.9;matches=1136;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009132
Chr1	stalkie_big_nohaplotig	exon	81161462	81161759	100	+	.	Parent=FBgn0030673.1.mrna1;Target=FBgn0030673.1 1 298 +
Chr1	stalkie_big_nohaplotig	exon	81161815	81162068	100	+	.	Parent=FBgn0030673.1.mrna1;Target=FBgn0030673.1 299 552 +
Chr1	stalkie_big_nohaplotig	exon	81162121	81162705	99	+	.	Parent=FBgn0030673.1.mrna1;Target=FBgn0030673.1 553 1137 +
Chr1	stalkie_big_nohaplotig	CDS	81161462	81161759	.	+	0	Parent=FBgn0030673.1.mrna1;Target=FBgn0030673.1 1 298 +
Chr1	stalkie_big_nohaplotig	CDS	81161815	81162068	.	+	2	Parent=FBgn0030673.1.mrna1;Target=FBgn0030673.1 299 552 +
Chr1	stalkie_big_nohaplotig	CDS	81162121	81162705	.	+	0	Parent=FBgn0030673.1.mrna1;Target=FBgn0030673.1 553 1137 +
Chr1	gffcl	locus	81243221	81243975	.	-	.	ID=RLOC_00009133;geneIDs=comp157310_c1_seq1.path2;transcripts=comp157310_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	81243221	81243975	.	-	.	ID=comp157310_c1_seq1.mrna2;geneID=comp157310_c1_seq1.path2;Name=comp157310_c1_seq1;Dir=indeterminatecoverage=100.0;identity=96.2;matches=732;mismatches=15;indels=14;unknowns=0;Target=comp157310_c1_seq1 753 1 .;CDS_Target=comp157310_c1_seq1 627 577 .;locus=RLOC_00009133
Chr1	stalkie_big_nohaplotig	exon	81243221	81243975	96	-	.	Parent=comp157310_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	81243347	81243397	.	-	0	Parent=comp157310_c1_seq1.mrna2
Chr1	gffcl	locus	81261886	81290695	.	+	.	ID=RLOC_00009134;geneIDs=FBgn0015024.1.path1,comp144710_c0_seq1.path1;transcripts=comp144710_c0_seq1.mrna1,FBgn0015024.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	81261886	81290695	.	+	.	ID=comp144710_c0_seq1.mrna1;geneID=comp144710_c0_seq1.path1;Name=comp144710_c0_seq1;Dir=sensecoverage=94.8;identity=97.7;matches=2605;mismatches=28;indels=34;unknowns=0;locus=RLOC_00009134
Chr1	stalkie_big_nohaplotig	exon	81261886	81262433	100	+	.	Parent=comp144710_c0_seq1.mrna1;Target=comp144710_c0_seq1 86 633 +
Chr1	stalkie_big_nohaplotig	exon	81262820	81262990	100	+	.	Parent=comp144710_c0_seq1.mrna1;Target=comp144710_c0_seq1 634 804 +
Chr1	stalkie_big_nohaplotig	exon	81280986	81281537	99	+	.	Parent=comp144710_c0_seq1.mrna1;Target=comp144710_c0_seq1 805 1357 +
Chr1	stalkie_big_nohaplotig	exon	81285298	81285520	100	+	.	Parent=comp144710_c0_seq1.mrna1;Target=comp144710_c0_seq1 1358 1580 +
Chr1	stalkie_big_nohaplotig	exon	81285583	81285944	100	+	.	Parent=comp144710_c0_seq1.mrna1;Target=comp144710_c0_seq1 1581 1942 +
Chr1	stalkie_big_nohaplotig	exon	81289705	81290312	99	+	.	Parent=comp144710_c0_seq1.mrna1;Target=comp144710_c0_seq1 1943 2550 +
Chr1	stalkie_big_nohaplotig	exon	81290483	81290491	100	+	.	Parent=comp144710_c0_seq1.mrna1;Target=comp144710_c0_seq1 2567 2575 +
Chr1	stalkie_big_nohaplotig	exon	81290504	81290695	68	+	.	Parent=comp144710_c0_seq1.mrna1;Target=comp144710_c0_seq1 2602 2762 +
Chr1	stalkie_big_nohaplotig	CDS	81262912	81262990	.	+	0	Parent=comp144710_c0_seq1.mrna1;Target=comp144710_c0_seq1 726 804 +
Chr1	stalkie_big_nohaplotig	CDS	81280986	81281445	.	+	2	Parent=comp144710_c0_seq1.mrna1;Target=comp144710_c0_seq1 805 1265 +
Chr1	stalkie_big_nohaplotig	mRNA	81262837	81281994	.	+	.	ID=FBgn0015024.1.mrna1;geneID=FBgn0015024.1.path1;Name=FBgn0015024.1;Dir=sensecoverage=100.0;identity=100.0;matches=1101;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009134
Chr1	stalkie_big_nohaplotig	exon	81262837	81262990	100	+	.	Parent=FBgn0015024.1.mrna1;Target=FBgn0015024.1 1 154 +
Chr1	stalkie_big_nohaplotig	exon	81280986	81281760	100	+	.	Parent=FBgn0015024.1.mrna1;Target=FBgn0015024.1 155 929 +
Chr1	stalkie_big_nohaplotig	exon	81281823	81281994	100	+	.	Parent=FBgn0015024.1.mrna1;Target=FBgn0015024.1 930 1101 +
Chr1	stalkie_big_nohaplotig	CDS	81262837	81262990	.	+	0	Parent=FBgn0015024.1.mrna1;Target=FBgn0015024.1 1 154 +
Chr1	stalkie_big_nohaplotig	CDS	81280986	81281760	.	+	2	Parent=FBgn0015024.1.mrna1;Target=FBgn0015024.1 155 929 +
Chr1	stalkie_big_nohaplotig	CDS	81281823	81281994	.	+	1	Parent=FBgn0015024.1.mrna1;Target=FBgn0015024.1 930 1101 +
Chr1	gffcl	locus	81371231	81373286	.	+	.	ID=RLOC_00009136;geneIDs=comp163899_c0_seq1.path2;transcripts=comp163899_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	81371231	81373286	.	+	.	ID=comp163899_c0_seq1.mrna2;geneID=comp163899_c0_seq1.path2;Name=comp163899_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=2051;mismatches=5;indels=1;unknowns=0;Target=comp163899_c0_seq1 2057 1 .;CDS_Target=comp163899_c0_seq1 542 393 .;locus=RLOC_00009136
Chr1	stalkie_big_nohaplotig	exon	81371231	81373286	99	+	.	Parent=comp163899_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	81371623	81371771	.	+	0	Parent=comp163899_c0_seq1.mrna2
Chr1	gffcl	locus	81381492	81483066	.	.	.	ID=RLOC_00009137;geneIDs=FBgn0262730.1.path1,comp146264_c0_seq1.path1,comp158946_c4_seq1.path1,comp161870_c0_seq1.path1;transcripts=comp158946_c4_seq1.mrna1,FBgn0262730.1.mrna1,comp146264_c0_seq1.mrna1,comp161870_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	81381492	81483066	.	+	.	ID=comp158946_c4_seq1.mrna1;geneID=comp158946_c4_seq1.path1;Name=comp158946_c4_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=5018;mismatches=4;indels=0;unknowns=0;locus=RLOC_00009137
Chr1	stalkie_big_nohaplotig	exon	81381492	81382228	100	+	.	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 1 737 +
Chr1	stalkie_big_nohaplotig	exon	81382535	81382821	100	+	.	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 738 1024 +
Chr1	stalkie_big_nohaplotig	exon	81382875	81383123	100	+	.	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 1025 1273 +
Chr1	stalkie_big_nohaplotig	exon	81386022	81386539	100	+	.	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 1274 1791 +
Chr1	stalkie_big_nohaplotig	exon	81386598	81386811	100	+	.	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 1792 2005 +
Chr1	stalkie_big_nohaplotig	exon	81403977	81404120	100	+	.	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 2006 2149 +
Chr1	stalkie_big_nohaplotig	exon	81404175	81404384	99	+	.	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 2150 2359 +
Chr1	stalkie_big_nohaplotig	exon	81414812	81414826	93	+	.	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 2360 2374 +
Chr1	stalkie_big_nohaplotig	exon	81415061	81415069	100	+	.	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 2380 2388 +
Chr1	stalkie_big_nohaplotig	exon	81415090	81415097	100	+	.	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 2448 2455 +
Chr1	stalkie_big_nohaplotig	exon	81426651	81426656	100	+	.	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 2479 2484 +
Chr1	stalkie_big_nohaplotig	exon	81432282	81432289	100	+	.	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 2648 2655 +
Chr1	stalkie_big_nohaplotig	exon	81433008	81433012	100	+	.	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 2659 2663 +
Chr1	stalkie_big_nohaplotig	exon	81443195	81443444	100	+	.	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 2664 2913 +
Chr1	stalkie_big_nohaplotig	exon	81457772	81458127	100	+	.	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 2914 3269 +
Chr1	stalkie_big_nohaplotig	exon	81458200	81458601	100	+	.	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 3270 3671 +
Chr1	stalkie_big_nohaplotig	exon	81458663	81458795	100	+	.	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 3672 3804 +
Chr1	stalkie_big_nohaplotig	exon	81458860	81458968	100	+	.	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 3805 3913 +
Chr1	stalkie_big_nohaplotig	exon	81459029	81459323	100	+	.	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 3914 4208 +
Chr1	stalkie_big_nohaplotig	exon	81463573	81463829	100	+	.	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 4209 4465 +
Chr1	stalkie_big_nohaplotig	exon	81482258	81483066	99	+	.	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 4466 5274 +
Chr1	stalkie_big_nohaplotig	CDS	81382189	81382228	.	+	0	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 698 737 +
Chr1	stalkie_big_nohaplotig	CDS	81382535	81382821	.	+	2	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 738 1024 +
Chr1	stalkie_big_nohaplotig	CDS	81382875	81383123	.	+	0	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 1025 1273 +
Chr1	stalkie_big_nohaplotig	CDS	81386022	81386539	.	+	0	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 1274 1791 +
Chr1	stalkie_big_nohaplotig	CDS	81386598	81386811	.	+	1	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 1792 2005 +
Chr1	stalkie_big_nohaplotig	CDS	81403977	81404120	.	+	0	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 2006 2149 +
Chr1	stalkie_big_nohaplotig	CDS	81404175	81404384	.	+	0	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 2150 2359 +
Chr1	stalkie_big_nohaplotig	CDS	81414812	81414826	.	+	0	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 2360 2374 +
Chr1	stalkie_big_nohaplotig	CDS	81415061	81415069	.	+	0	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 2380 2388 +
Chr1	stalkie_big_nohaplotig	CDS	81415090	81415097	.	+	0	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 2448 2455 +
Chr1	stalkie_big_nohaplotig	CDS	81426651	81426656	.	+	1	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 2479 2484 +
Chr1	stalkie_big_nohaplotig	CDS	81432282	81432289	.	+	1	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 2648 2655 +
Chr1	stalkie_big_nohaplotig	CDS	81433008	81433012	.	+	2	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 2659 2663 +
Chr1	stalkie_big_nohaplotig	CDS	81443195	81443444	.	+	0	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 2664 2913 +
Chr1	stalkie_big_nohaplotig	CDS	81457772	81458127	.	+	2	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 2914 3269 +
Chr1	stalkie_big_nohaplotig	CDS	81458200	81458601	.	+	0	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 3270 3671 +
Chr1	stalkie_big_nohaplotig	CDS	81458663	81458795	.	+	0	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 3672 3804 +
Chr1	stalkie_big_nohaplotig	CDS	81458860	81458968	.	+	2	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 3805 3913 +
Chr1	stalkie_big_nohaplotig	CDS	81459029	81459323	.	+	1	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 3914 4208 +
Chr1	stalkie_big_nohaplotig	CDS	81463573	81463829	.	+	0	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 4209 4465 +
Chr1	stalkie_big_nohaplotig	CDS	81482258	81482272	.	+	1	Parent=comp158946_c4_seq1.mrna1;Target=comp158946_c4_seq1 4466 4480 +
Chr1	stalkie_big_nohaplotig	mRNA	81382144	81463829	.	+	.	ID=FBgn0262730.1.mrna1;geneID=FBgn0262730.1.path1;Name=FBgn0262730.1;Dir=sensecoverage=99.7;identity=99.1;matches=3561;mismatches=24;indels=8;unknowns=0;locus=RLOC_00009137
Chr1	stalkie_big_nohaplotig	exon	81382144	81382228	100	+	.	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 1 85 +
Chr1	stalkie_big_nohaplotig	exon	81382535	81382821	100	+	.	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 86 372 +
Chr1	stalkie_big_nohaplotig	exon	81382875	81383123	100	+	.	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 373 621 +
Chr1	stalkie_big_nohaplotig	exon	81386022	81386539	100	+	.	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 622 1139 +
Chr1	stalkie_big_nohaplotig	exon	81386598	81386811	100	+	.	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 1140 1353 +
Chr1	stalkie_big_nohaplotig	exon	81403977	81404120	100	+	.	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 1354 1497 +
Chr1	stalkie_big_nohaplotig	exon	81404175	81404384	99	+	.	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 1498 1707 +
Chr1	stalkie_big_nohaplotig	exon	81414812	81414826	93	+	.	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 1708 1722 +
Chr1	stalkie_big_nohaplotig	exon	81415122	81415176	47	+	.	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 1952 1998 +
Chr1	stalkie_big_nohaplotig	exon	81419145	81419153	100	+	.	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 1999 2007 +
Chr1	stalkie_big_nohaplotig	exon	81433009	81433014	100	+	.	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 2008 2013 +
Chr1	stalkie_big_nohaplotig	exon	81443197	81443444	100	+	.	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 2014 2261 +
Chr1	stalkie_big_nohaplotig	exon	81457772	81458127	100	+	.	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 2262 2617 +
Chr1	stalkie_big_nohaplotig	exon	81458200	81458601	100	+	.	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 2618 3019 +
Chr1	stalkie_big_nohaplotig	exon	81458663	81458795	100	+	.	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 3020 3152 +
Chr1	stalkie_big_nohaplotig	exon	81458860	81458968	100	+	.	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 3153 3261 +
Chr1	stalkie_big_nohaplotig	exon	81459029	81459323	100	+	.	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 3262 3556 +
Chr1	stalkie_big_nohaplotig	exon	81463573	81463829	100	+	.	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 3557 3813 +
Chr1	stalkie_big_nohaplotig	CDS	81382144	81382228	.	+	0	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 1 85 +
Chr1	stalkie_big_nohaplotig	CDS	81382535	81382821	.	+	2	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 86 372 +
Chr1	stalkie_big_nohaplotig	CDS	81382875	81383123	.	+	0	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 373 621 +
Chr1	stalkie_big_nohaplotig	CDS	81386022	81386539	.	+	0	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 622 1139 +
Chr1	stalkie_big_nohaplotig	CDS	81386598	81386811	.	+	1	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 1140 1353 +
Chr1	stalkie_big_nohaplotig	CDS	81403977	81404120	.	+	0	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 1354 1497 +
Chr1	stalkie_big_nohaplotig	CDS	81404175	81404384	.	+	0	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 1498 1707 +
Chr1	stalkie_big_nohaplotig	CDS	81414812	81414826	.	+	0	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 1708 1722 +
Chr1	stalkie_big_nohaplotig	CDS	81415122	81415176	.	+	0	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 1952 1998 +
Chr1	stalkie_big_nohaplotig	CDS	81419145	81419153	.	+	2	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 1999 2007 +
Chr1	stalkie_big_nohaplotig	CDS	81433009	81433014	.	+	2	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 2008 2013 +
Chr1	stalkie_big_nohaplotig	CDS	81443197	81443444	.	+	2	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 2014 2261 +
Chr1	stalkie_big_nohaplotig	CDS	81457772	81458127	.	+	0	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 2262 2617 +
Chr1	stalkie_big_nohaplotig	CDS	81458200	81458601	.	+	1	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 2618 3019 +
Chr1	stalkie_big_nohaplotig	CDS	81458663	81458795	.	+	1	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 3020 3152 +
Chr1	stalkie_big_nohaplotig	CDS	81458860	81458968	.	+	0	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 3153 3261 +
Chr1	stalkie_big_nohaplotig	CDS	81459029	81459323	.	+	2	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 3262 3556 +
Chr1	stalkie_big_nohaplotig	CDS	81463573	81463829	.	+	1	Parent=FBgn0262730.1.mrna1;Target=FBgn0262730.1 3557 3813 +
Chr1	stalkie_big_nohaplotig	mRNA	81383102	81384064	.	+	.	ID=comp146264_c0_seq1.mrna1;geneID=comp146264_c0_seq1.path1;Name=comp146264_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.7;matches=961;mismatches=2;indels=1;unknowns=0;Target=comp146264_c0_seq1 964 1 .;CDS_Target=comp146264_c0_seq1 862 755 .;locus=RLOC_00009137
Chr1	stalkie_big_nohaplotig	exon	81383102	81384064	99	+	.	Parent=comp146264_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	81383856	81383962	.	+	0	Parent=comp146264_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	81414805	81415558	.	-	.	ID=comp161870_c0_seq1.mrna1;geneID=comp161870_c0_seq1.path1;Name=comp161870_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=746;mismatches=8;indels=1;unknowns=0;Target=comp161870_c0_seq1 755 1 .;CDS_Target=comp161870_c0_seq1 316 206 .;locus=RLOC_00009137
Chr1	stalkie_big_nohaplotig	exon	81414805	81415558	98	-	.	Parent=comp161870_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	81415244	81415353	.	-	0	Parent=comp161870_c0_seq1.mrna1
Chr1	gffcl	locus	81485719	81486816	.	+	.	ID=RLOC_00009138;geneIDs=comp136025_c0_seq1.path1;transcripts=comp136025_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	81485719	81486816	.	+	.	ID=comp136025_c0_seq1.mrna1;geneID=comp136025_c0_seq1.path1;Name=comp136025_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=1098;mismatches=0;indels=0;unknowns=0;Target=comp136025_c0_seq1 1098 1 .;CDS_Target=comp136025_c0_seq1 758 636 .;locus=RLOC_00009138
Chr1	stalkie_big_nohaplotig	exon	81485719	81486816	100	+	.	Parent=comp136025_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	81486354	81486476	.	+	0	Parent=comp136025_c0_seq1.mrna1
Chr1	gffcl	locus	81487077	81487432	.	-	.	ID=RLOC_00009139;geneIDs=comp145947_c0_seq1.path1;transcripts=comp145947_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	81487077	81487432	.	-	.	ID=comp145947_c0_seq1.mrna1;geneID=comp145947_c0_seq1.path1;Name=comp145947_c0_seq1;Dir=indeterminatecoverage=90.5;identity=96.1;matches=346;mismatches=10;indels=4;unknowns=0;Target=comp145947_c0_seq1 360 1 .;CDS_Target=comp145947_c0_seq1 144 88 .;locus=RLOC_00009139
Chr1	stalkie_big_nohaplotig	exon	81487077	81487432	96	-	.	Parent=comp145947_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	81487289	81487345	.	-	0	Parent=comp145947_c0_seq1.mrna1
Chr1	gffcl	locus	81487529	81487622	.	+	.	ID=RLOC_00009140;geneIDs=comp140584_c0_seq1.path2;transcripts=comp140584_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	81487529	81487622	.	+	.	ID=comp140584_c0_seq1.mrna2;geneID=comp140584_c0_seq1.path2;Name=comp140584_c0_seq1;Dir=indeterminatecoverage=7.0;identity=100.0;matches=94;mismatches=0;indels=0;unknowns=0;Target=comp140584_c0_seq1 1348 1255 .;locus=RLOC_00009140
Chr1	stalkie_big_nohaplotig	exon	81487529	81487622	100	+	.	Parent=comp140584_c0_seq1.mrna2
Chr1	gffcl	locus	81491933	81492233	.	+	.	ID=RLOC_00009141;geneIDs=comp95577_c0_seq1.path1;transcripts=comp95577_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	81491933	81492233	.	+	.	ID=comp95577_c0_seq1.mrna1;geneID=comp95577_c0_seq1.path1;Name=comp95577_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=301;mismatches=0;indels=0;unknowns=0;Target=comp95577_c0_seq1 301 1 .;CDS_Target=comp95577_c0_seq1 150 1 .;locus=RLOC_00009141
Chr1	stalkie_big_nohaplotig	exon	81491933	81492233	100	+	.	Parent=comp95577_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	81491933	81492082	.	+	0	Parent=comp95577_c0_seq1.mrna1
Chr1	gffcl	locus	81492239	81492492	.	+	.	ID=RLOC_00009142;geneIDs=comp415097_c0_seq1.path1;transcripts=comp415097_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	81492239	81492492	.	+	.	ID=comp415097_c0_seq1.mrna1;geneID=comp415097_c0_seq1.path1;Name=comp415097_c0_seq1;Dir=indeterminatecoverage=98.1;identity=100.0;matches=254;mismatches=0;indels=0;unknowns=0;Target=comp415097_c0_seq1 259 6 .;CDS_Target=comp415097_c0_seq1 258 190 .;locus=RLOC_00009142
Chr1	stalkie_big_nohaplotig	exon	81492239	81492492	100	+	.	Parent=comp415097_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	81492423	81492491	.	+	0	Parent=comp415097_c0_seq1.mrna1
Chr1	gffcl	locus	81492637	81492994	.	-	.	ID=RLOC_00009143;geneIDs=comp73728_c0_seq1.path1;transcripts=comp73728_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	81492637	81492994	.	-	.	ID=comp73728_c0_seq1.mrna1;geneID=comp73728_c0_seq1.path1;Name=comp73728_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=357;mismatches=1;indels=1;unknowns=0;Target=comp73728_c0_seq1 359 1 .;CDS_Target=comp73728_c0_seq1 277 197 .;locus=RLOC_00009143
Chr1	stalkie_big_nohaplotig	exon	81492637	81492994	99	-	.	Parent=comp73728_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	81492719	81492798	.	-	0	Parent=comp73728_c0_seq1.mrna1
Chr1	gffcl	locus	81493007	81493497	.	-	.	ID=RLOC_00009144;geneIDs=comp135658_c0_seq1.path1;transcripts=comp135658_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	81493007	81493497	.	-	.	ID=comp135658_c0_seq1.mrna1;geneID=comp135658_c0_seq1.path1;Name=comp135658_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.6;matches=490;mismatches=1;indels=1;unknowns=0;Target=comp135658_c0_seq1 492 1 .;CDS_Target=comp135658_c0_seq1 85 2 .;locus=RLOC_00009144
Chr1	stalkie_big_nohaplotig	exon	81493007	81493497	99	-	.	Parent=comp135658_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	81493413	81493496	.	-	0	Parent=comp135658_c0_seq1.mrna1
Chr1	gffcl	locus	81493500	81493846	.	+	.	ID=RLOC_00009145;geneIDs=comp203060_c0_seq1.path1;transcripts=comp203060_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	81493500	81493846	.	+	.	ID=comp203060_c0_seq1.mrna1;geneID=comp203060_c0_seq1.path1;Name=comp203060_c0_seq1;Dir=indeterminatecoverage=95.6;identity=100.0;matches=347;mismatches=0;indels=0;unknowns=0;Target=comp203060_c0_seq1 363 17 .;CDS_Target=comp203060_c0_seq1 300 214 .;locus=RLOC_00009145
Chr1	stalkie_big_nohaplotig	exon	81493500	81493846	100	+	.	Parent=comp203060_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	81493697	81493783	.	+	0	Parent=comp203060_c0_seq1.mrna1
Chr1	gffcl	locus	81494386	81496181	.	-	.	ID=RLOC_00009146;geneIDs=comp135290_c0_seq1.path1;transcripts=comp135290_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	81494386	81496181	.	-	.	ID=comp135290_c0_seq1.mrna1;geneID=comp135290_c0_seq1.path1;Name=comp135290_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1783;mismatches=3;indels=10;unknowns=0;Target=comp135290_c0_seq1 1786 1 .;CDS_Target=comp135290_c0_seq1 1293 997 .;locus=RLOC_00009146
Chr1	stalkie_big_nohaplotig	exon	81494386	81496181	99	-	.	Parent=comp135290_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	81494879	81495175	.	-	0	Parent=comp135290_c0_seq1.mrna1
Chr1	gffcl	locus	81566119	81566186	.	-	.	ID=RLOC_00009147;geneIDs=comp162823_c3_seq1.path1;transcripts=comp162823_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	81566119	81566186	.	-	.	ID=comp162823_c3_seq1.mrna1;geneID=comp162823_c3_seq1.path1;Name=comp162823_c3_seq1;Dir=indeterminatecoverage=3.7;identity=98.5;matches=67;mismatches=1;indels=0;unknowns=0;Target=comp162823_c3_seq1 68 1 .;CDS_Target=comp162823_c3_seq1 68 2 .;locus=RLOC_00009147
Chr1	stalkie_big_nohaplotig	exon	81566119	81566186	98	-	.	Parent=comp162823_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	81566119	81566185	.	-	0	Parent=comp162823_c3_seq1.mrna1
Chr1	gffcl	locus	81655121	81655557	.	+	.	ID=RLOC_00009148;geneIDs=comp118371_c0_seq1.path1;transcripts=comp118371_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	81655121	81655557	.	+	.	ID=comp118371_c0_seq1.mrna1;geneID=comp118371_c0_seq1.path1;Name=comp118371_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.5;matches=436;mismatches=1;indels=1;unknowns=0;Target=comp118371_c0_seq1 438 1 .;CDS_Target=comp118371_c0_seq1 388 329 .;locus=RLOC_00009148
Chr1	stalkie_big_nohaplotig	exon	81655121	81655557	99	+	.	Parent=comp118371_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	81655448	81655507	.	+	0	Parent=comp118371_c0_seq1.mrna1
Chr1	gffcl	locus	81847307	81863673	.	+	.	ID=RLOC_00009149;geneIDs=FBgn0000028.1.path2;transcripts=FBgn0000028.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	81847307	81863673	.	+	.	ID=FBgn0000028.1.mrna2;geneID=FBgn0000028.1.path2;Name=FBgn0000028.1;Dir=sensecoverage=70.5;identity=100.0;matches=473;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009149
Chr1	stalkie_big_nohaplotig	exon	81847307	81847312	100	+	.	Parent=FBgn0000028.1.mrna2;Target=FBgn0000028.1 230 235 +
Chr1	stalkie_big_nohaplotig	exon	81854625	81854633	100	+	.	Parent=FBgn0000028.1.mrna2;Target=FBgn0000028.1 258 266 +
Chr1	stalkie_big_nohaplotig	exon	81861400	81861407	100	+	.	Parent=FBgn0000028.1.mrna2;Target=FBgn0000028.1 281 288 +
Chr1	stalkie_big_nohaplotig	exon	81861433	81861665	100	+	.	Parent=FBgn0000028.1.mrna2;Target=FBgn0000028.1 328 560 +
Chr1	stalkie_big_nohaplotig	exon	81863403	81863560	100	+	.	Parent=FBgn0000028.1.mrna2;Target=FBgn0000028.1 561 718 +
Chr1	stalkie_big_nohaplotig	exon	81863615	81863673	100	+	.	Parent=FBgn0000028.1.mrna2;Target=FBgn0000028.1 719 777 +
Chr1	stalkie_big_nohaplotig	CDS	81847307	81847312	.	+	1	Parent=FBgn0000028.1.mrna2;Target=FBgn0000028.1 230 235 +
Chr1	stalkie_big_nohaplotig	CDS	81854625	81854633	.	+	1	Parent=FBgn0000028.1.mrna2;Target=FBgn0000028.1 258 266 +
Chr1	stalkie_big_nohaplotig	CDS	81861400	81861407	.	+	1	Parent=FBgn0000028.1.mrna2;Target=FBgn0000028.1 281 288 +
Chr1	stalkie_big_nohaplotig	CDS	81861433	81861665	.	+	2	Parent=FBgn0000028.1.mrna2;Target=FBgn0000028.1 328 560 +
Chr1	stalkie_big_nohaplotig	CDS	81863403	81863560	.	+	0	Parent=FBgn0000028.1.mrna2;Target=FBgn0000028.1 561 718 +
Chr1	stalkie_big_nohaplotig	CDS	81863615	81863673	.	+	1	Parent=FBgn0000028.1.mrna2;Target=FBgn0000028.1 719 777 +
Chr1	gffcl	locus	81900815	81903441	.	-	.	ID=RLOC_00009150;geneIDs=comp152608_c0_seq1.path1;transcripts=comp152608_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	81900815	81903441	.	-	.	ID=comp152608_c0_seq1.mrna1;geneID=comp152608_c0_seq1.path1;Name=comp152608_c0_seq1;Dir=antisensecoverage=100.0;identity=97.6;matches=2321;mismatches=6;indels=50;unknowns=0;Target=comp152608_c0_seq1 304 471 .;locus=RLOC_00009150
Chr1	stalkie_big_nohaplotig	exon	81900815	81902892	97	-	.	Parent=comp152608_c0_seq1.mrna1;Target=comp152608_c0_seq1 1 2128 -
Chr1	stalkie_big_nohaplotig	exon	81903193	81903441	100	-	.	Parent=comp152608_c0_seq1.mrna1;Target=comp152608_c0_seq1 2129 2377 -
Chr1	stalkie_big_nohaplotig	CDS	81901118	81901284	.	-	0	Parent=comp152608_c0_seq1.mrna1
Chr1	gffcl	locus	82049782	82059953	.	-	.	ID=RLOC_00009152;geneIDs=comp163399_c0_seq1.path1;transcripts=comp163399_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	82049782	82059953	.	-	.	ID=comp163399_c0_seq1.mrna1;geneID=comp163399_c0_seq1.path1;Name=comp163399_c0_seq1;Dir=antisensecoverage=99.9;identity=97.2;matches=2384;mismatches=43;indels=26;unknowns=0;locus=RLOC_00009152
Chr1	stalkie_big_nohaplotig	exon	82049782	82050774	96	-	.	Parent=comp163399_c0_seq1.mrna1;Target=comp163399_c0_seq1 1 985 -
Chr1	stalkie_big_nohaplotig	exon	82058506	82059953	97	-	.	Parent=comp163399_c0_seq1.mrna1;Target=comp163399_c0_seq1 986 2439 -
Chr1	stalkie_big_nohaplotig	CDS	82050191	82050774	.	-	0	Parent=comp163399_c0_seq1.mrna1;Target=comp163399_c0_seq1 416 985 .
Chr1	stalkie_big_nohaplotig	CDS	82058506	82059678	.	-	0	Parent=comp163399_c0_seq1.mrna1;Target=comp163399_c0_seq1 986 2164 .
Chr1	gffcl	locus	82065771	82067747	.	-	.	ID=RLOC_00009154;geneIDs=Dv_FBgn0201266.2.path3;transcripts=Dv_FBgn0201266.2.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	82065771	82067747	.	-	.	ID=Dv_FBgn0201266.2.mrna3;geneID=Dv_FBgn0201266.2.path3;Name=Dv_FBgn0201266.2;Dir=sensecoverage=100.0;identity=100.0;matches=1401;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009154
Chr1	stalkie_big_nohaplotig	exon	82065771	82065889	100	-	.	Parent=Dv_FBgn0201266.2.mrna3;Target=Dv_FBgn0201266.2 1283 1401 +
Chr1	stalkie_big_nohaplotig	exon	82066312	82066847	100	-	.	Parent=Dv_FBgn0201266.2.mrna3;Target=Dv_FBgn0201266.2 747 1282 +
Chr1	stalkie_big_nohaplotig	exon	82066899	82067001	100	-	.	Parent=Dv_FBgn0201266.2.mrna3;Target=Dv_FBgn0201266.2 644 746 +
Chr1	stalkie_big_nohaplotig	exon	82067054	82067447	100	-	.	Parent=Dv_FBgn0201266.2.mrna3;Target=Dv_FBgn0201266.2 250 643 +
Chr1	stalkie_big_nohaplotig	exon	82067499	82067747	100	-	.	Parent=Dv_FBgn0201266.2.mrna3;Target=Dv_FBgn0201266.2 1 249 +
Chr1	stalkie_big_nohaplotig	CDS	82065771	82065889	.	-	2	Parent=Dv_FBgn0201266.2.mrna3;Target=Dv_FBgn0201266.2 1283 1401 +
Chr1	stalkie_big_nohaplotig	CDS	82066312	82066847	.	-	1	Parent=Dv_FBgn0201266.2.mrna3;Target=Dv_FBgn0201266.2 747 1282 +
Chr1	stalkie_big_nohaplotig	CDS	82066899	82067001	.	-	2	Parent=Dv_FBgn0201266.2.mrna3;Target=Dv_FBgn0201266.2 644 746 +
Chr1	stalkie_big_nohaplotig	CDS	82067054	82067447	.	-	0	Parent=Dv_FBgn0201266.2.mrna3;Target=Dv_FBgn0201266.2 250 643 +
Chr1	stalkie_big_nohaplotig	CDS	82067499	82067747	.	-	0	Parent=Dv_FBgn0201266.2.mrna3;Target=Dv_FBgn0201266.2 1 249 +
Chr1	gffcl	locus	82101213	83976449	.	.	.	ID=RLOC_00009155;geneIDs=FBgn0026375.1.path1,FBgn0030634.1.path1,comp116726_c0_seq1.path1,comp145442_c0_seq1.path1;transcripts=FBgn0026375.1.mrna1,FBgn0030634.1.mrna1,comp116726_c0_seq1.mrna1,comp145442_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	82101213	83976449	.	-	.	ID=FBgn0026375.1.mrna1;geneID=FBgn0026375.1.path1;Name=FBgn0026375.1;Dir=sensecoverage=84.5;identity=96.0;matches=3437;mismatches=87;indels=56;unknowns=0;Target=FBgn0026375.1 8 22 +;locus=RLOC_00009155
Chr1	stalkie_big_nohaplotig	exon	82101213	82101222	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3827 3836 +
Chr1	stalkie_big_nohaplotig	exon	82105628	82105631	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3823 3826 +
Chr1	stalkie_big_nohaplotig	exon	82109401	82109405	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3818 3822 +
Chr1	stalkie_big_nohaplotig	exon	82116099	82116104	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3812 3817 +
Chr1	stalkie_big_nohaplotig	exon	82121398	82121399	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3810 3811 +
Chr1	stalkie_big_nohaplotig	exon	82127852	82127860	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3801 3809 +
Chr1	stalkie_big_nohaplotig	exon	82131752	82131754	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3798 3800 +
Chr1	stalkie_big_nohaplotig	exon	82137884	82137887	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3794 3797 +
Chr1	stalkie_big_nohaplotig	exon	82141907	82141911	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3789 3793 +
Chr1	stalkie_big_nohaplotig	exon	82154754	82154770	63	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3767 3788 +
Chr1	stalkie_big_nohaplotig	exon	82159910	82159915	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3761 3766 +
Chr1	stalkie_big_nohaplotig	exon	82162273	82162339	43	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3688 3746 +
Chr1	stalkie_big_nohaplotig	exon	82163401	82163410	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3632 3641 +
Chr1	stalkie_big_nohaplotig	exon	82168319	82168320	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3630 3631 +
Chr1	stalkie_big_nohaplotig	exon	82189595	82189601	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3623 3629 +
Chr1	stalkie_big_nohaplotig	exon	82190521	82190529	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3614 3622 +
Chr1	stalkie_big_nohaplotig	exon	82195618	82195624	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3607 3613 +
Chr1	stalkie_big_nohaplotig	exon	82199723	82199728	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3601 3606 +
Chr1	stalkie_big_nohaplotig	exon	82211125	82211129	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3596 3600 +
Chr1	stalkie_big_nohaplotig	exon	82217651	82217659	88	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3524 3532 +
Chr1	stalkie_big_nohaplotig	exon	82220880	82220894	93	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3509 3523 +
Chr1	stalkie_big_nohaplotig	exon	82222742	82222746	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3504 3508 +
Chr1	stalkie_big_nohaplotig	exon	82227227	82227231	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3499 3503 +
Chr1	stalkie_big_nohaplotig	exon	82230654	82230658	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3494 3498 +
Chr1	stalkie_big_nohaplotig	exon	82242004	82242007	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3490 3493 +
Chr1	stalkie_big_nohaplotig	exon	82249344	82249347	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3486 3489 +
Chr1	stalkie_big_nohaplotig	exon	82250378	82250385	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3478 3485 +
Chr1	stalkie_big_nohaplotig	exon	82255563	82255565	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3475 3477 +
Chr1	stalkie_big_nohaplotig	exon	82262596	82262602	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3468 3474 +
Chr1	stalkie_big_nohaplotig	exon	82265326	82265334	88	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3459 3467 +
Chr1	stalkie_big_nohaplotig	exon	82272363	82272376	78	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3445 3458 +
Chr1	stalkie_big_nohaplotig	exon	82274495	82274498	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3441 3444 +
Chr1	stalkie_big_nohaplotig	exon	82286463	82286471	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3396 3404 +
Chr1	stalkie_big_nohaplotig	exon	82286477	82286485	88	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3351 3359 +
Chr1	stalkie_big_nohaplotig	exon	82321119	82321126	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3332 3339 +
Chr1	stalkie_big_nohaplotig	exon	82368295	82368307	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3313 3325 +
Chr1	stalkie_big_nohaplotig	exon	82372181	82372230	61	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3269 3312 +
Chr1	stalkie_big_nohaplotig	exon	82379445	82379451	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3256 3262 +
Chr1	stalkie_big_nohaplotig	exon	82386964	82386967	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3252 3255 +
Chr1	stalkie_big_nohaplotig	exon	82391582	82391583	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3250 3251 +
Chr1	stalkie_big_nohaplotig	exon	82398747	82398754	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3223 3230 +
Chr1	stalkie_big_nohaplotig	exon	82402410	82402456	42	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3160 3222 +
Chr1	stalkie_big_nohaplotig	exon	82406564	82406568	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3155 3159 +
Chr1	stalkie_big_nohaplotig	exon	82408097	82408100	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3151 3154 +
Chr1	stalkie_big_nohaplotig	exon	82413610	82413616	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3144 3150 +
Chr1	stalkie_big_nohaplotig	exon	82426618	82426675	50	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3086 3143 +
Chr1	stalkie_big_nohaplotig	exon	82427503	82427504	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 3084 3085 +
Chr1	stalkie_big_nohaplotig	exon	83906436	83906498	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 2978 3040 +
Chr1	stalkie_big_nohaplotig	exon	83972669	83972911	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 2735 2977 +
Chr1	stalkie_big_nohaplotig	exon	83972964	83973142	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 2556 2734 +
Chr1	stalkie_big_nohaplotig	exon	83973212	83973794	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 1973 2555 +
Chr1	stalkie_big_nohaplotig	exon	83974321	83974697	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 1596 1972 +
Chr1	stalkie_big_nohaplotig	exon	83974747	83975040	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 1302 1595 +
Chr1	stalkie_big_nohaplotig	exon	83975095	83976227	100	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 169 1301 +
Chr1	stalkie_big_nohaplotig	exon	83976288	83976449	99	-	.	Parent=FBgn0026375.1.mrna1;Target=FBgn0026375.1 8 168 +
Chr1	stalkie_big_nohaplotig	CDS	83976434	83976449	.	-	0	Parent=FBgn0026375.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	82110020	82160175	.	-	.	ID=FBgn0030634.1.mrna1;geneID=FBgn0030634.1.path1;Name=FBgn0030634.1;Dir=sensecoverage=100.0;identity=100.0;matches=966;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009155
Chr1	stalkie_big_nohaplotig	exon	82110020	82110166	100	-	.	Parent=FBgn0030634.1.mrna1;Target=FBgn0030634.1 820 966 +
Chr1	stalkie_big_nohaplotig	exon	82110226	82110395	100	-	.	Parent=FBgn0030634.1.mrna1;Target=FBgn0030634.1 650 819 +
Chr1	stalkie_big_nohaplotig	exon	82159185	82159436	100	-	.	Parent=FBgn0030634.1.mrna1;Target=FBgn0030634.1 398 649 +
Chr1	stalkie_big_nohaplotig	exon	82159495	82159608	100	-	.	Parent=FBgn0030634.1.mrna1;Target=FBgn0030634.1 284 397 +
Chr1	stalkie_big_nohaplotig	exon	82159825	82159954	100	-	.	Parent=FBgn0030634.1.mrna1;Target=FBgn0030634.1 154 283 +
Chr1	stalkie_big_nohaplotig	exon	82160023	82160175	100	-	.	Parent=FBgn0030634.1.mrna1;Target=FBgn0030634.1 1 153 +
Chr1	stalkie_big_nohaplotig	CDS	82110020	82110166	.	-	0	Parent=FBgn0030634.1.mrna1;Target=FBgn0030634.1 820 966 +
Chr1	stalkie_big_nohaplotig	CDS	82110226	82110395	.	-	2	Parent=FBgn0030634.1.mrna1;Target=FBgn0030634.1 650 819 +
Chr1	stalkie_big_nohaplotig	CDS	82159185	82159436	.	-	2	Parent=FBgn0030634.1.mrna1;Target=FBgn0030634.1 398 649 +
Chr1	stalkie_big_nohaplotig	CDS	82159495	82159608	.	-	2	Parent=FBgn0030634.1.mrna1;Target=FBgn0030634.1 284 397 +
Chr1	stalkie_big_nohaplotig	CDS	82159825	82159954	.	-	0	Parent=FBgn0030634.1.mrna1;Target=FBgn0030634.1 154 283 +
Chr1	stalkie_big_nohaplotig	CDS	82160023	82160175	.	-	0	Parent=FBgn0030634.1.mrna1;Target=FBgn0030634.1 1 153 +
Chr1	stalkie_big_nohaplotig	mRNA	82379090	82379531	.	-	.	ID=comp116726_c0_seq1.mrna1;geneID=comp116726_c0_seq1.path1;Name=comp116726_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=442;mismatches=0;indels=0;unknowns=0;Target=comp116726_c0_seq1 443 2 .;CDS_Target=comp116726_c0_seq1 80 3 .;locus=RLOC_00009155
Chr1	stalkie_big_nohaplotig	exon	82379090	82379531	100	-	.	Parent=comp116726_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	82379453	82379530	.	-	0	Parent=comp116726_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	82386283	82387791	.	+	.	ID=comp145442_c0_seq1.mrna1;geneID=comp145442_c0_seq1.path1;Name=comp145442_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1500;mismatches=9;indels=0;unknowns=0;Target=comp145442_c0_seq1 1509 1 .;CDS_Target=comp145442_c0_seq1 919 698 .;locus=RLOC_00009155
Chr1	stalkie_big_nohaplotig	exon	82386283	82387791	99	+	.	Parent=comp145442_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	82386980	82387201	.	+	0	Parent=comp145442_c0_seq1.mrna1
Chr1	gffcl	locus	82133451	82133896	.	-	.	ID=RLOC_00009156;geneIDs=comp82672_c0_seq1.path1;transcripts=comp82672_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	82133451	82133896	.	-	.	ID=comp82672_c0_seq1.mrna1;geneID=comp82672_c0_seq1.path1;Name=comp82672_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.3;matches=443;mismatches=3;indels=0;unknowns=0;Target=comp82672_c0_seq1 449 4 .;CDS_Target=comp82672_c0_seq1 182 93 .;locus=RLOC_00009156
Chr1	stalkie_big_nohaplotig	exon	82133451	82133896	99	-	.	Parent=comp82672_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	82133718	82133807	.	-	0	Parent=comp82672_c0_seq1.mrna1
Chr1	gffcl	locus	82214150	82214596	.	-	.	ID=RLOC_00009157;geneIDs=Dp_FBgn0245412.2.path3;transcripts=Dp_FBgn0245412.2.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	82214150	82214596	.	-	.	ID=Dp_FBgn0245412.2.mrna3;geneID=Dp_FBgn0245412.2.path3;Name=Dp_FBgn0245412.2;Dir=indeterminatecoverage=100.0;identity=99.1;matches=443;mismatches=4;indels=0;unknowns=0;Target=Dp_FBgn0245412.2 447 1 .;locus=RLOC_00009157
Chr1	stalkie_big_nohaplotig	exon	82214150	82214596	99	-	.	Parent=Dp_FBgn0245412.2.mrna3
Chr1	stalkie_big_nohaplotig	CDS	82214150	82214596	.	-	0	Parent=Dp_FBgn0245412.2.mrna3
Chr1	gffcl	locus	82264714	82265160	.	+	.	ID=RLOC_00009158;geneIDs=Dp_FBgn0245412.2.path5;transcripts=Dp_FBgn0245412.2.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	82264714	82265160	.	+	.	ID=Dp_FBgn0245412.2.mrna5;geneID=Dp_FBgn0245412.2.path5;Name=Dp_FBgn0245412.2;Dir=indeterminatecoverage=100.0;identity=98.7;matches=441;mismatches=6;indels=0;unknowns=0;Target=Dp_FBgn0245412.2 447 1 .;locus=RLOC_00009158
Chr1	stalkie_big_nohaplotig	exon	82264714	82265160	98	+	.	Parent=Dp_FBgn0245412.2.mrna5
Chr1	stalkie_big_nohaplotig	CDS	82264714	82265160	.	+	0	Parent=Dp_FBgn0245412.2.mrna5
Chr1	gffcl	locus	82289810	82308362	.	-	.	ID=RLOC_00009159;geneIDs=FBgn0040285.1.path1;transcripts=FBgn0040285.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	82289810	82308362	.	-	.	ID=FBgn0040285.1.mrna1;geneID=FBgn0040285.1.path1;Name=FBgn0040285.1;Dir=sensecoverage=99.8;identity=100.0;matches=1042;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009159
Chr1	stalkie_big_nohaplotig	exon	82289810	82289959	100	-	.	Parent=FBgn0040285.1.mrna1;Target=FBgn0040285.1 895 1044 +
Chr1	stalkie_big_nohaplotig	exon	82290019	82290274	100	-	.	Parent=FBgn0040285.1.mrna1;Target=FBgn0040285.1 639 894 +
Chr1	stalkie_big_nohaplotig	exon	82290334	82290463	100	-	.	Parent=FBgn0040285.1.mrna1;Target=FBgn0040285.1 509 638 +
Chr1	stalkie_big_nohaplotig	exon	82290546	82290750	100	-	.	Parent=FBgn0040285.1.mrna1;Target=FBgn0040285.1 304 508 +
Chr1	stalkie_big_nohaplotig	exon	82307998	82308219	100	-	.	Parent=FBgn0040285.1.mrna1;Target=FBgn0040285.1 82 303 +
Chr1	stalkie_big_nohaplotig	exon	82308284	82308362	100	-	.	Parent=FBgn0040285.1.mrna1;Target=FBgn0040285.1 3 81 +
Chr1	stalkie_big_nohaplotig	CDS	82289810	82289959	.	-	0	Parent=FBgn0040285.1.mrna1;Target=FBgn0040285.1 895 1044 +
Chr1	stalkie_big_nohaplotig	CDS	82290019	82290274	.	-	1	Parent=FBgn0040285.1.mrna1;Target=FBgn0040285.1 639 894 +
Chr1	stalkie_big_nohaplotig	CDS	82290334	82290463	.	-	2	Parent=FBgn0040285.1.mrna1;Target=FBgn0040285.1 509 638 +
Chr1	stalkie_big_nohaplotig	CDS	82290546	82290750	.	-	0	Parent=FBgn0040285.1.mrna1;Target=FBgn0040285.1 304 508 +
Chr1	stalkie_big_nohaplotig	CDS	82307998	82308219	.	-	0	Parent=FBgn0040285.1.mrna1;Target=FBgn0040285.1 82 303 +
Chr1	stalkie_big_nohaplotig	CDS	82308284	82308361	.	-	0	Parent=FBgn0040285.1.mrna1;Target=FBgn0040285.1 4 81 +
Chr1	gffcl	locus	82306651	82307041	.	+	.	ID=RLOC_00009160;geneIDs=comp115903_c0_seq1.path1;transcripts=comp115903_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	82306651	82307041	.	+	.	ID=comp115903_c0_seq1.mrna1;geneID=comp115903_c0_seq1.path1;Name=comp115903_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=391;mismatches=0;indels=0;unknowns=0;Target=comp115903_c0_seq1 391 1 .;CDS_Target=comp115903_c0_seq1 167 3 .;locus=RLOC_00009160
Chr1	stalkie_big_nohaplotig	exon	82306651	82307041	100	+	.	Parent=comp115903_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	82306653	82306817	.	+	0	Parent=comp115903_c0_seq1.mrna1
Chr1	gffcl	locus	82307335	82307709	.	-	.	ID=RLOC_00009161;geneIDs=comp119016_c0_seq1.path1;transcripts=comp119016_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	82307335	82307709	.	-	.	ID=comp119016_c0_seq1.mrna1;geneID=comp119016_c0_seq1.path1;Name=comp119016_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=375;mismatches=0;indels=0;unknowns=0;Target=comp119016_c0_seq1 375 1 .;CDS_Target=comp119016_c0_seq1 360 121 .;locus=RLOC_00009161
Chr1	stalkie_big_nohaplotig	exon	82307335	82307709	100	-	.	Parent=comp119016_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	82307350	82307589	.	-	0	Parent=comp119016_c0_seq1.mrna1
Chr1	gffcl	locus	82310331	82311549	.	-	.	ID=RLOC_00009162;geneIDs=comp158965_c0_seq1.path1;transcripts=comp158965_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	82310331	82311549	.	-	.	ID=comp158965_c0_seq1.mrna1;geneID=comp158965_c0_seq1.path1;Name=comp158965_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.6;matches=1168;mismatches=33;indels=21;unknowns=0;Target=comp158965_c0_seq1 1204 1 .;CDS_Target=comp158965_c0_seq1 1069 656 .;locus=RLOC_00009162
Chr1	stalkie_big_nohaplotig	exon	82310331	82311549	95	-	.	Parent=comp158965_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	82310466	82310876	.	-	0	Parent=comp158965_c0_seq1.mrna1
Chr1	gffcl	locus	82334729	82383993	.	+	.	ID=RLOC_00009163;geneIDs=FBgn0029789.1.path1,comp160356_c4_seq1.path1;transcripts=comp160356_c4_seq1.mrna1,FBgn0029789.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	82334729	82383993	.	+	.	ID=comp160356_c4_seq1.mrna1;geneID=comp160356_c4_seq1.path1;Name=comp160356_c4_seq1;Dir=antisensecoverage=87.3;identity=99.9;matches=3627;mismatches=3;indels=0;unknowns=0;locus=RLOC_00009163
Chr1	stalkie_big_nohaplotig	exon	82334729	82335184	100	+	.	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 3702 4157 -
Chr1	stalkie_big_nohaplotig	exon	82335268	82335411	99	+	.	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 3558 3701 -
Chr1	stalkie_big_nohaplotig	exon	82380292	82380367	100	+	.	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 3482 3557 -
Chr1	stalkie_big_nohaplotig	exon	82380421	82380932	100	+	.	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 2970 3481 -
Chr1	stalkie_big_nohaplotig	exon	82381002	82381181	100	+	.	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 2790 2969 -
Chr1	stalkie_big_nohaplotig	exon	82381245	82381412	100	+	.	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 2622 2789 -
Chr1	stalkie_big_nohaplotig	exon	82381494	82381582	100	+	.	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 2533 2621 -
Chr1	stalkie_big_nohaplotig	exon	82381638	82381788	100	+	.	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 2382 2532 -
Chr1	stalkie_big_nohaplotig	exon	82381844	82381982	100	+	.	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 2243 2381 -
Chr1	stalkie_big_nohaplotig	exon	82382037	82382163	100	+	.	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 2116 2242 -
Chr1	stalkie_big_nohaplotig	exon	82382220	82382576	100	+	.	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 1759 2115 -
Chr1	stalkie_big_nohaplotig	exon	82382630	82383024	100	+	.	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 1364 1758 -
Chr1	stalkie_big_nohaplotig	exon	82383104	82383564	99	+	.	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 903 1363 -
Chr1	stalkie_big_nohaplotig	exon	82383619	82383993	99	+	.	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 528 902 -
Chr1	stalkie_big_nohaplotig	CDS	82335038	82335184	.	+	0	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 3702 3848 .
Chr1	stalkie_big_nohaplotig	CDS	82335268	82335411	.	+	0	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 3558 3701 .
Chr1	stalkie_big_nohaplotig	CDS	82380292	82380367	.	+	0	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 3482 3557 .
Chr1	stalkie_big_nohaplotig	CDS	82380421	82380932	.	+	2	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 2970 3481 .
Chr1	stalkie_big_nohaplotig	CDS	82381002	82381181	.	+	0	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 2790 2969 .
Chr1	stalkie_big_nohaplotig	CDS	82381245	82381412	.	+	0	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 2622 2789 .
Chr1	stalkie_big_nohaplotig	CDS	82381494	82381582	.	+	0	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 2533 2621 .
Chr1	stalkie_big_nohaplotig	CDS	82381638	82381788	.	+	1	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 2382 2532 .
Chr1	stalkie_big_nohaplotig	CDS	82381844	82381982	.	+	0	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 2243 2381 .
Chr1	stalkie_big_nohaplotig	CDS	82382037	82382163	.	+	2	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 2116 2242 .
Chr1	stalkie_big_nohaplotig	CDS	82382220	82382340	.	+	1	Parent=comp160356_c4_seq1.mrna1;Target=comp160356_c4_seq1 1995 2115 .
Chr1	stalkie_big_nohaplotig	mRNA	82335023	82383772	.	+	.	ID=FBgn0029789.1.mrna1;geneID=FBgn0029789.1.path1;Name=FBgn0029789.1;Dir=sensecoverage=100.0;identity=100.0;matches=2951;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009163
Chr1	stalkie_big_nohaplotig	exon	82335023	82335184	100	+	.	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 1 162 +
Chr1	stalkie_big_nohaplotig	exon	82335268	82335411	99	+	.	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 163 306 +
Chr1	stalkie_big_nohaplotig	exon	82380292	82380367	100	+	.	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 307 382 +
Chr1	stalkie_big_nohaplotig	exon	82380421	82380932	100	+	.	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 383 894 +
Chr1	stalkie_big_nohaplotig	exon	82381002	82381181	100	+	.	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 895 1074 +
Chr1	stalkie_big_nohaplotig	exon	82381245	82381412	100	+	.	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 1075 1242 +
Chr1	stalkie_big_nohaplotig	exon	82381494	82381582	100	+	.	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 1243 1331 +
Chr1	stalkie_big_nohaplotig	exon	82381638	82381788	100	+	.	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 1332 1482 +
Chr1	stalkie_big_nohaplotig	exon	82381844	82381982	100	+	.	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 1483 1621 +
Chr1	stalkie_big_nohaplotig	exon	82382037	82382163	100	+	.	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 1622 1748 +
Chr1	stalkie_big_nohaplotig	exon	82382220	82382336	100	+	.	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 1749 1865 +
Chr1	stalkie_big_nohaplotig	exon	82382386	82382576	100	+	.	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 1866 2056 +
Chr1	stalkie_big_nohaplotig	exon	82382630	82382816	100	+	.	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 2057 2243 +
Chr1	stalkie_big_nohaplotig	exon	82382874	82383024	100	+	.	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 2244 2394 +
Chr1	stalkie_big_nohaplotig	exon	82383104	82383405	100	+	.	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 2395 2696 +
Chr1	stalkie_big_nohaplotig	exon	82383463	82383564	100	+	.	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 2697 2798 +
Chr1	stalkie_big_nohaplotig	exon	82383619	82383772	100	+	.	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 2799 2952 +
Chr1	stalkie_big_nohaplotig	CDS	82335023	82335184	.	+	0	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 1 162 +
Chr1	stalkie_big_nohaplotig	CDS	82335268	82335411	.	+	0	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 163 306 +
Chr1	stalkie_big_nohaplotig	CDS	82380292	82380367	.	+	0	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 307 382 +
Chr1	stalkie_big_nohaplotig	CDS	82380421	82380932	.	+	2	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 383 894 +
Chr1	stalkie_big_nohaplotig	CDS	82381002	82381181	.	+	0	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 895 1074 +
Chr1	stalkie_big_nohaplotig	CDS	82381245	82381412	.	+	0	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 1075 1242 +
Chr1	stalkie_big_nohaplotig	CDS	82381494	82381582	.	+	0	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 1243 1331 +
Chr1	stalkie_big_nohaplotig	CDS	82381638	82381788	.	+	1	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 1332 1482 +
Chr1	stalkie_big_nohaplotig	CDS	82381844	82381982	.	+	0	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 1483 1621 +
Chr1	stalkie_big_nohaplotig	CDS	82382037	82382163	.	+	2	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 1622 1748 +
Chr1	stalkie_big_nohaplotig	CDS	82382220	82382336	.	+	1	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 1749 1865 +
Chr1	stalkie_big_nohaplotig	CDS	82382386	82382576	.	+	1	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 1866 2056 +
Chr1	stalkie_big_nohaplotig	CDS	82382630	82382816	.	+	2	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 2057 2243 +
Chr1	stalkie_big_nohaplotig	CDS	82382874	82383024	.	+	1	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 2244 2394 +
Chr1	stalkie_big_nohaplotig	CDS	82383104	82383405	.	+	0	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 2395 2696 +
Chr1	stalkie_big_nohaplotig	CDS	82383463	82383564	.	+	1	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 2697 2798 +
Chr1	stalkie_big_nohaplotig	CDS	82383619	82383772	.	+	1	Parent=FBgn0029789.1.mrna1;Target=FBgn0029789.1 2799 2952 +
Chr1	gffcl	locus	82401996	82480818	.	+	.	ID=RLOC_00009164;geneIDs=FBgn0000566.1.path1,comp237933_c0_seq1.path1;transcripts=FBgn0000566.1.mrna1,comp237933_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	82401996	82480818	.	+	.	ID=FBgn0000566.1.mrna1;geneID=FBgn0000566.1.path1;Name=FBgn0000566.1;Dir=sensecoverage=100.0;identity=100.0;matches=1182;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009164
Chr1	stalkie_big_nohaplotig	exon	82401996	82402139	100	+	.	Parent=FBgn0000566.1.mrna1;Target=FBgn0000566.1 1 144 +
Chr1	stalkie_big_nohaplotig	exon	82426957	82427153	100	+	.	Parent=FBgn0000566.1.mrna1;Target=FBgn0000566.1 145 341 +
Chr1	stalkie_big_nohaplotig	exon	82427217	82427307	100	+	.	Parent=FBgn0000566.1.mrna1;Target=FBgn0000566.1 342 432 +
Chr1	stalkie_big_nohaplotig	exon	82441321	82441588	100	+	.	Parent=FBgn0000566.1.mrna1;Target=FBgn0000566.1 433 700 +
Chr1	stalkie_big_nohaplotig	exon	82480281	82480608	100	+	.	Parent=FBgn0000566.1.mrna1;Target=FBgn0000566.1 701 1028 +
Chr1	stalkie_big_nohaplotig	exon	82480665	82480818	100	+	.	Parent=FBgn0000566.1.mrna1;Target=FBgn0000566.1 1029 1182 +
Chr1	stalkie_big_nohaplotig	CDS	82401996	82402139	.	+	0	Parent=FBgn0000566.1.mrna1;Target=FBgn0000566.1 1 144 +
Chr1	stalkie_big_nohaplotig	CDS	82426957	82427153	.	+	0	Parent=FBgn0000566.1.mrna1;Target=FBgn0000566.1 145 341 +
Chr1	stalkie_big_nohaplotig	CDS	82427217	82427307	.	+	1	Parent=FBgn0000566.1.mrna1;Target=FBgn0000566.1 342 432 +
Chr1	stalkie_big_nohaplotig	CDS	82441321	82441588	.	+	0	Parent=FBgn0000566.1.mrna1;Target=FBgn0000566.1 433 700 +
Chr1	stalkie_big_nohaplotig	CDS	82480281	82480608	.	+	2	Parent=FBgn0000566.1.mrna1;Target=FBgn0000566.1 701 1028 +
Chr1	stalkie_big_nohaplotig	CDS	82480665	82480818	.	+	1	Parent=FBgn0000566.1.mrna1;Target=FBgn0000566.1 1029 1182 +
Chr1	stalkie_big_nohaplotig	mRNA	82402117	82402334	.	+	.	ID=comp237933_c0_seq1.mrna1;geneID=comp237933_c0_seq1.path1;Name=comp237933_c0_seq1;Dir=indeterminatecoverage=92.8;identity=100.0;matches=218;mismatches=0;indels=0;unknowns=0;Target=comp237933_c0_seq1 218 1 .;CDS_Target=comp237933_c0_seq1 95 3 .;locus=RLOC_00009164
Chr1	stalkie_big_nohaplotig	exon	82402117	82402334	100	+	.	Parent=comp237933_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	82402119	82402211	.	+	0	Parent=comp237933_c0_seq1.mrna1
Chr1	gffcl	locus	82403933	82404319	.	+	.	ID=RLOC_00009165;geneIDs=comp142965_c2_seq1.path1;transcripts=comp142965_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	82403933	82404319	.	+	.	ID=comp142965_c2_seq1.mrna1;geneID=comp142965_c2_seq1.path1;Name=comp142965_c2_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=387;mismatches=0;indels=0;unknowns=0;Target=comp142965_c2_seq1 387 1 .;CDS_Target=comp142965_c2_seq1 70 2 .;locus=RLOC_00009165
Chr1	stalkie_big_nohaplotig	exon	82403933	82404319	100	+	.	Parent=comp142965_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	82403934	82404002	.	+	0	Parent=comp142965_c2_seq1.mrna1
Chr1	gffcl	locus	82463879	82470517	.	+	.	ID=RLOC_00009167;geneIDs=comp163966_c2_seq1.path1;transcripts=comp163966_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	82463879	82470517	.	+	.	ID=comp163966_c2_seq1.mrna1;geneID=comp163966_c2_seq1.path1;Name=comp163966_c2_seq1;Dir=indeterminatecoverage=95.5;identity=86.9;matches=1086;mismatches=78;indels=86;unknowns=0;Target=comp163966_c2_seq1 1087 800 .;locus=RLOC_00009167
Chr1	stalkie_big_nohaplotig	exon	82463879	82464482	95	+	.	Parent=comp163966_c2_seq1.mrna1;Target=comp163966_c2_seq1 604 1 .
Chr1	stalkie_big_nohaplotig	exon	82469904	82470517	79	+	.	Parent=comp163966_c2_seq1.mrna1;Target=comp163966_c2_seq1 1196 605 .
Chr1	stalkie_big_nohaplotig	CDS	82470073	82470408	.	+	0	Parent=comp163966_c2_seq1.mrna1
Chr1	gffcl	locus	82468227	82469486	.	-	.	ID=RLOC_00009168;geneIDs=FBgn0039711.2.path6;transcripts=FBgn0039711.2.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	82468227	82469486	.	-	.	ID=FBgn0039711.2.mrna6;geneID=FBgn0039711.2.path6;Name=FBgn0039711.2;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1255;mismatches=5;indels=0;unknowns=0;Target=FBgn0039711.2 1260 1 .;CDS_Target=FBgn0039711.2 1260 514 .;locus=RLOC_00009168
Chr1	stalkie_big_nohaplotig	exon	82468227	82469486	99	-	.	Parent=FBgn0039711.2.mrna6
Chr1	stalkie_big_nohaplotig	CDS	82468227	82468973	.	-	0	Parent=FBgn0039711.2.mrna6
Chr1	gffcl	locus	82472980	82474790	.	-	.	ID=RLOC_00009169;geneIDs=Dp_FBgn0243606.path1;transcripts=Dp_FBgn0243606.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	82472980	82474790	.	-	.	ID=Dp_FBgn0243606.mrna1;geneID=Dp_FBgn0243606.path1;Name=Dp_FBgn0243606;Dir=indeterminatecoverage=98.8;identity=97.9;matches=1782;mismatches=29;indels=9;unknowns=0;Target=Dp_FBgn0243606 1820 1 .;CDS_Target=Dp_FBgn0243606 1818 1 .;locus=RLOC_00009169
Chr1	stalkie_big_nohaplotig	exon	82472980	82474790	97	-	.	Parent=Dp_FBgn0243606.mrna1
Chr1	stalkie_big_nohaplotig	CDS	82472982	82474790	.	-	0	Parent=Dp_FBgn0243606.mrna1
Chr1	gffcl	locus	82481323	82481701	.	+	.	ID=RLOC_00009170;geneIDs=comp142792_c0_seq1.path1;transcripts=comp142792_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	82481323	82481701	.	+	.	ID=comp142792_c0_seq1.mrna1;geneID=comp142792_c0_seq1.path1;Name=comp142792_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=378;mismatches=1;indels=1;unknowns=0;Target=comp142792_c0_seq1 380 1 .;CDS_Target=comp142792_c0_seq1 94 41 .;locus=RLOC_00009170
Chr1	stalkie_big_nohaplotig	exon	82481323	82481701	99	+	.	Parent=comp142792_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	82481363	82481416	.	+	0	Parent=comp142792_c0_seq1.mrna1
Chr1	gffcl	locus	82484289	82487519	.	+	.	ID=RLOC_00009171;geneIDs=comp163922_c3_seq1.path1;transcripts=comp163922_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	82484289	82487519	.	+	.	ID=comp163922_c3_seq1.mrna1;geneID=comp163922_c3_seq1.path1;Name=comp163922_c3_seq1;Dir=indeterminatecoverage=97.1;identity=97.9;matches=3168;mismatches=62;indels=6;unknowns=0;Target=comp163922_c3_seq1 3332 98 .;CDS_Target=comp163922_c3_seq1 2386 1052 .;locus=RLOC_00009171
Chr1	stalkie_big_nohaplotig	exon	82484289	82487519	97	+	.	Parent=comp163922_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	82485241	82486575	.	+	0	Parent=comp163922_c3_seq1.mrna1
Chr1	gffcl	locus	82492377	82493577	.	-	.	ID=RLOC_00009172;geneIDs=comp161293_c1_seq1.path1;transcripts=comp161293_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	82492377	82493577	.	-	.	ID=comp161293_c1_seq1.mrna1;geneID=comp161293_c1_seq1.path1;Name=comp161293_c1_seq1;Dir=indeterminatecoverage=100.0;identity=96.6;matches=1160;mismatches=24;indels=17;unknowns=0;Target=comp161293_c1_seq1 1184 1 .;CDS_Target=comp161293_c1_seq1 487 122 .;locus=RLOC_00009172
Chr1	stalkie_big_nohaplotig	exon	82492377	82493577	96	-	.	Parent=comp161293_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	82493091	82493456	.	-	0	Parent=comp161293_c1_seq1.mrna1
Chr1	gffcl	locus	82530866	82531789	.	+	.	ID=RLOC_00009173;geneIDs=comp163779_c0_seq1.path3;transcripts=comp163779_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	82530866	82531789	.	+	.	ID=comp163779_c0_seq1.mrna3;geneID=comp163779_c0_seq1.path3;Name=comp163779_c0_seq1;Dir=indeterminatecoverage=95.0;identity=95.5;matches=886;mismatches=38;indels=4;unknowns=0;Target=comp163779_c0_seq1 955 28 .;CDS_Target=comp163779_c0_seq1 368 171 .;locus=RLOC_00009173
Chr1	stalkie_big_nohaplotig	exon	82530866	82531789	95	+	.	Parent=comp163779_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	82531009	82531206	.	+	0	Parent=comp163779_c0_seq1.mrna3
Chr1	gffcl	locus	82661755	82663835	.	+	.	ID=RLOC_00009176;geneIDs=comp163899_c0_seq1.path8;transcripts=comp163899_c0_seq1.mrna8
Chr1	stalkie_big_nohaplotig	mRNA	82661755	82663835	.	+	.	ID=comp163899_c0_seq1.mrna8;geneID=comp163899_c0_seq1.path8;Name=comp163899_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=2048;mismatches=8;indels=26;unknowns=0;Target=comp163899_c0_seq1 2057 1 .;CDS_Target=comp163899_c0_seq1 542 393 .;locus=RLOC_00009176
Chr1	stalkie_big_nohaplotig	exon	82661755	82663835	98	+	.	Parent=comp163899_c0_seq1.mrna8
Chr1	stalkie_big_nohaplotig	CDS	82662147	82662295	.	+	0	Parent=comp163899_c0_seq1.mrna8
Chr1	gffcl	locus	82796310	82796912	.	+	.	ID=RLOC_00009177;geneIDs=comp160431_c0_seq1.path5;transcripts=comp160431_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	82796310	82796912	.	+	.	ID=comp160431_c0_seq1.mrna5;geneID=comp160431_c0_seq1.path5;Name=comp160431_c0_seq1;Dir=indeterminatecoverage=99.5;identity=98.2;matches=594;mismatches=9;indels=2;unknowns=0;Target=comp160431_c0_seq1 605 1 .;CDS_Target=comp160431_c0_seq1 528 1 .;locus=RLOC_00009177
Chr1	stalkie_big_nohaplotig	exon	82796310	82796912	98	+	.	Parent=comp160431_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	82796310	82796837	.	+	0	Parent=comp160431_c0_seq1.mrna5
Chr1	gffcl	locus	82836370	82837326	.	-	.	ID=RLOC_00009178;geneIDs=comp153510_c0_seq1.path1;transcripts=comp153510_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	82836370	82837326	.	-	.	ID=comp153510_c0_seq1.mrna1;geneID=comp153510_c0_seq1.path1;Name=comp153510_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.8;matches=955;mismatches=2;indels=0;unknowns=0;Target=comp153510_c0_seq1 958 2 .;CDS_Target=comp153510_c0_seq1 826 560 .;locus=RLOC_00009178
Chr1	stalkie_big_nohaplotig	exon	82836370	82837326	99	-	.	Parent=comp153510_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	82836502	82836768	.	-	0	Parent=comp153510_c0_seq1.mrna1
Chr1	gffcl	locus	82912299	84386723	.	-	.	ID=RLOC_00009180;geneIDs=comp163083_c1_seq1.path1;transcripts=comp163083_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	82912299	84386723	.	-	.	ID=comp163083_c1_seq1.mrna1;geneID=comp163083_c1_seq1.path1;Name=comp163083_c1_seq1;Dir=indeterminatecoverage=60.4;identity=94.1;matches=3077;mismatches=145;indels=48;unknowns=0;Target=comp163083_c1_seq1 1657 1556 .;locus=RLOC_00009180
Chr1	stalkie_big_nohaplotig	exon	82912299	82912798	92	-	.	Parent=comp163083_c1_seq1.mrna1;Target=comp163083_c1_seq1 3319 2817 .
Chr1	stalkie_big_nohaplotig	exon	82912804	82913871	87	-	.	Parent=comp163083_c1_seq1.mrna1;Target=comp163083_c1_seq1 2740 1694 .
Chr1	stalkie_big_nohaplotig	exon	82926689	82926690	100	-	.	Parent=comp163083_c1_seq1.mrna1;Target=comp163083_c1_seq1 1693 1692 .
Chr1	stalkie_big_nohaplotig	exon	84385043	84386723	98	-	.	Parent=comp163083_c1_seq1.mrna1;Target=comp163083_c1_seq1 1691 3 .
Chr1	stalkie_big_nohaplotig	CDS	84385078	84385179	.	-	0	Parent=comp163083_c1_seq1.mrna1
Chr1	gffcl	locus	83024365	83025897	.	+	.	ID=RLOC_00009182;geneIDs=FBgn0028686.1.path1;transcripts=FBgn0028686.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	83024365	83025897	.	+	.	ID=FBgn0028686.1.mrna1;geneID=FBgn0028686.1.path1;Name=FBgn0028686.1;Dir=sensecoverage=100.0;identity=100.0;matches=1281;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009182
Chr1	stalkie_big_nohaplotig	exon	83024365	83024442	100	+	.	Parent=FBgn0028686.1.mrna1;Target=FBgn0028686.1 1 78 +
Chr1	stalkie_big_nohaplotig	exon	83024493	83024576	100	+	.	Parent=FBgn0028686.1.mrna1;Target=FBgn0028686.1 79 162 +
Chr1	stalkie_big_nohaplotig	exon	83024727	83025174	100	+	.	Parent=FBgn0028686.1.mrna1;Target=FBgn0028686.1 163 610 +
Chr1	stalkie_big_nohaplotig	exon	83025227	83025897	100	+	.	Parent=FBgn0028686.1.mrna1;Target=FBgn0028686.1 611 1281 +
Chr1	stalkie_big_nohaplotig	CDS	83024365	83024442	.	+	0	Parent=FBgn0028686.1.mrna1;Target=FBgn0028686.1 1 78 +
Chr1	stalkie_big_nohaplotig	CDS	83024493	83024576	.	+	0	Parent=FBgn0028686.1.mrna1;Target=FBgn0028686.1 79 162 +
Chr1	stalkie_big_nohaplotig	CDS	83024727	83025174	.	+	0	Parent=FBgn0028686.1.mrna1;Target=FBgn0028686.1 163 610 +
Chr1	stalkie_big_nohaplotig	CDS	83025227	83025897	.	+	2	Parent=FBgn0028686.1.mrna1;Target=FBgn0028686.1 611 1281 +
Chr1	gffcl	locus	83112922	83115481	.	+	.	ID=RLOC_00009184;geneIDs=FBgn0030869.1.path1;transcripts=FBgn0030869.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	83112922	83115481	.	+	.	ID=FBgn0030869.1.mrna1;geneID=FBgn0030869.1.path1;Name=FBgn0030869.1;Dir=sensecoverage=86.4;identity=99.9;matches=2345;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009184
Chr1	stalkie_big_nohaplotig	exon	83112922	83113146	99	+	.	Parent=FBgn0030869.1.mrna1;Target=FBgn0030869.1 1 225 +
Chr1	stalkie_big_nohaplotig	exon	83113201	83113942	100	+	.	Parent=FBgn0030869.1.mrna1;Target=FBgn0030869.1 226 967 +
Chr1	stalkie_big_nohaplotig	exon	83113999	83115111	99	+	.	Parent=FBgn0030869.1.mrna1;Target=FBgn0030869.1 968 2080 +
Chr1	stalkie_big_nohaplotig	exon	83115163	83115257	100	+	.	Parent=FBgn0030869.1.mrna1;Target=FBgn0030869.1 2081 2175 +
Chr1	stalkie_big_nohaplotig	exon	83115310	83115481	100	+	.	Parent=FBgn0030869.1.mrna1;Target=FBgn0030869.1 2176 2347 +
Chr1	stalkie_big_nohaplotig	CDS	83112922	83113146	.	+	0	Parent=FBgn0030869.1.mrna1;Target=FBgn0030869.1 1 225 +
Chr1	stalkie_big_nohaplotig	CDS	83113201	83113942	.	+	0	Parent=FBgn0030869.1.mrna1;Target=FBgn0030869.1 226 967 +
Chr1	stalkie_big_nohaplotig	CDS	83113999	83115111	.	+	2	Parent=FBgn0030869.1.mrna1;Target=FBgn0030869.1 968 2080 +
Chr1	stalkie_big_nohaplotig	CDS	83115163	83115257	.	+	2	Parent=FBgn0030869.1.mrna1;Target=FBgn0030869.1 2081 2175 +
Chr1	stalkie_big_nohaplotig	CDS	83115310	83115480	.	+	0	Parent=FBgn0030869.1.mrna1;Target=FBgn0030869.1 2176 2346 +
Chr1	gffcl	locus	83117861	83119044	.	-	.	ID=RLOC_00009185;geneIDs=comp162170_c0_seq1.path1;transcripts=comp162170_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	83117861	83119044	.	-	.	ID=comp162170_c0_seq1.mrna1;geneID=comp162170_c0_seq1.path1;Name=comp162170_c0_seq1;Dir=indeterminatecoverage=87.0;identity=97.0;matches=1030;mismatches=27;indels=5;unknowns=0;Target=comp162170_c0_seq1 838 452 .;locus=RLOC_00009185
Chr1	stalkie_big_nohaplotig	exon	83117861	83118895	96	-	.	Parent=comp162170_c0_seq1.mrna1;Target=comp162170_c0_seq1 1060 25 .
Chr1	stalkie_big_nohaplotig	exon	83119021	83119044	100	-	.	Parent=comp162170_c0_seq1.mrna1;Target=comp162170_c0_seq1 24 1 .
Chr1	stalkie_big_nohaplotig	CDS	83118085	83118471	.	-	0	Parent=comp162170_c0_seq1.mrna1
Chr1	gffcl	locus	83150479	83150816	.	+	.	ID=RLOC_00009186;geneIDs=comp145681_c0_seq1.path2;transcripts=comp145681_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	83150479	83150816	.	+	.	ID=comp145681_c0_seq1.mrna2;geneID=comp145681_c0_seq1.path2;Name=comp145681_c0_seq1;Dir=indeterminatecoverage=59.0;identity=79.0;matches=267;mismatches=61;indels=10;unknowns=0;Target=comp145681_c0_seq1 423 96 .;CDS_Target=comp145681_c0_seq1 182 96 .;locus=RLOC_00009186
Chr1	stalkie_big_nohaplotig	exon	83150479	83150816	78	+	.	Parent=comp145681_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	83150479	83150565	.	+	0	Parent=comp145681_c0_seq1.mrna2
Chr1	gffcl	locus	83213424	83214556	.	+	.	ID=RLOC_00009187;geneIDs=comp163325_c0_seq1.path1;transcripts=comp163325_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	83213424	83214556	.	+	.	ID=comp163325_c0_seq1.mrna1;geneID=comp163325_c0_seq1.path1;Name=comp163325_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1133;mismatches=0;indels=0;unknowns=0;Target=comp163325_c0_seq1 1133 1 .;CDS_Target=comp163325_c0_seq1 255 1 .;locus=RLOC_00009187
Chr1	stalkie_big_nohaplotig	exon	83213424	83214556	100	+	.	Parent=comp163325_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	83213424	83213678	.	+	0	Parent=comp163325_c0_seq1.mrna1
Chr1	gffcl	locus	83250170	83250424	.	-	.	ID=RLOC_00009189;geneIDs=comp160611_c3_seq1.path2;transcripts=comp160611_c3_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	83250170	83250424	.	-	.	ID=comp160611_c3_seq1.mrna2;geneID=comp160611_c3_seq1.path2;Name=comp160611_c3_seq1;Dir=indeterminatecoverage=10.4;identity=96.1;matches=245;mismatches=10;indels=0;unknowns=0;Target=comp160611_c3_seq1 2455 2201 .;locus=RLOC_00009189
Chr1	stalkie_big_nohaplotig	exon	83250170	83250424	96	-	.	Parent=comp160611_c3_seq1.mrna2
Chr1	gffcl	locus	83251736	83251922	.	-	.	ID=RLOC_00009190;geneIDs=FBgn0000394.1.path2;transcripts=FBgn0000394.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	83251736	83251922	.	-	.	ID=FBgn0000394.1.mrna2;geneID=FBgn0000394.1.path2;Name=FBgn0000394.1;Dir=indeterminatecoverage=23.1;identity=100.0;matches=187;mismatches=0;indels=0;unknowns=0;Target=FBgn0000394.1 810 624 .;locus=RLOC_00009190
Chr1	stalkie_big_nohaplotig	exon	83251736	83251922	100	-	.	Parent=FBgn0000394.1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	83251736	83251922	.	-	2	Parent=FBgn0000394.1.mrna2
Chr1	gffcl	locus	83283706	83285214	.	-	.	ID=RLOC_00009191;geneIDs=ORF1589.path1;transcripts=ORF1589.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	83283706	83285214	.	-	.	ID=ORF1589.mrna1;geneID=ORF1589.path1;Name=ORF1589;Dir=indeterminatecoverage=99.7;identity=96.0;matches=1008;mismatches=42;indels=0;unknowns=0;locus=RLOC_00009191
Chr1	stalkie_big_nohaplotig	exon	83283706	83284291	96	-	.	Parent=ORF1589.mrna1;Target=ORF1589 1052 467 .
Chr1	stalkie_big_nohaplotig	exon	83284751	83285214	95	-	.	Parent=ORF1589.mrna1;Target=ORF1589 466 3 .
Chr1	stalkie_big_nohaplotig	CDS	83283708	83284291	.	-	2	Parent=ORF1589.mrna1;Target=ORF1589 1050 467 .
Chr1	stalkie_big_nohaplotig	CDS	83284751	83285213	.	-	0	Parent=ORF1589.mrna1;Target=ORF1589 466 4 .
Chr1	gffcl	locus	83300701	83302325	.	-	.	ID=RLOC_00009192;geneIDs=comp163577_c2_seq1.path1;transcripts=comp163577_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	83300701	83302325	.	-	.	ID=comp163577_c2_seq1.mrna1;geneID=comp163577_c2_seq1.path1;Name=comp163577_c2_seq1;Dir=indeterminatecoverage=72.7;identity=92.4;matches=1234;mismatches=87;indels=14;unknowns=0;locus=RLOC_00009192
Chr1	stalkie_big_nohaplotig	exon	83300701	83300780	90	-	.	Parent=comp163577_c2_seq1.mrna1;Target=comp163577_c2_seq1 1704 1626 .
Chr1	stalkie_big_nohaplotig	exon	83301020	83301091	86	-	.	Parent=comp163577_c2_seq1.mrna1;Target=comp163577_c2_seq1 1587 1517 .
Chr1	stalkie_big_nohaplotig	exon	83301149	83301265	88	-	.	Parent=comp163577_c2_seq1.mrna1;Target=comp163577_c2_seq1 1516 1400 .
Chr1	stalkie_big_nohaplotig	exon	83301270	83302325	93	-	.	Parent=comp163577_c2_seq1.mrna1;Target=comp163577_c2_seq1 1203 140 .
Chr1	stalkie_big_nohaplotig	CDS	83301020	83301091	.	-	0	Parent=comp163577_c2_seq1.mrna1;Target=comp163577_c2_seq1 1587 1517 .
Chr1	stalkie_big_nohaplotig	CDS	83301149	83301175	.	-	0	Parent=comp163577_c2_seq1.mrna1;Target=comp163577_c2_seq1 1516 1490 .
Chr1	gffcl	locus	83301505	84735441	.	.	.	ID=RLOC_00009193;geneIDs=FBgn0030466.1.path1,FBgn0052528.1.path1,comp155038_c0_seq1.path1,comp155955_c0_seq1.path2,comp158900_c4_seq1.path1,comp161342_c2_seq1.path2,comp163980_c0_seq1.path1;transcripts=comp155038_c0_seq1.mrna1,comp163980_c0_seq1.mrna1,comp161342_c2_seq1.mrna2,FBgn0030466.1.mrna1,comp158900_c4_seq1.mrna1,FBgn0052528.1.mrna1,comp155955_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	83301505	84382471	.	+	.	ID=comp155038_c0_seq1.mrna1;geneID=comp155038_c0_seq1.path1;Name=comp155038_c0_seq1;Dir=indeterminatecoverage=84.1;identity=90.8;matches=2948;mismatches=150;indels=150;unknowns=0;locus=RLOC_00009193
Chr1	stalkie_big_nohaplotig	exon	83301505	83301515	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 749 739 .
Chr1	stalkie_big_nohaplotig	exon	83315116	83315122	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 756 750 .
Chr1	stalkie_big_nohaplotig	exon	83317787	83317789	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 759 757 .
Chr1	stalkie_big_nohaplotig	exon	83324239	83324244	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 765 760 .
Chr1	stalkie_big_nohaplotig	exon	83329208	83329212	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 770 766 .
Chr1	stalkie_big_nohaplotig	exon	83352186	83352188	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 773 771 .
Chr1	stalkie_big_nohaplotig	exon	83358130	83358135	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 779 774 .
Chr1	stalkie_big_nohaplotig	exon	83372329	83372334	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 785 780 .
Chr1	stalkie_big_nohaplotig	exon	83396574	83396584	81	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 796 786 .
Chr1	stalkie_big_nohaplotig	exon	83398023	83398116	80	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 890 797 .
Chr1	stalkie_big_nohaplotig	exon	83399774	83399777	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 894 891 .
Chr1	stalkie_big_nohaplotig	exon	83403786	83403794	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 918 910 .
Chr1	stalkie_big_nohaplotig	exon	83418990	83419000	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 929 919 .
Chr1	stalkie_big_nohaplotig	exon	83425935	83425943	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 938 930 .
Chr1	stalkie_big_nohaplotig	exon	83430590	83430595	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 944 939 .
Chr1	stalkie_big_nohaplotig	exon	83439590	83439595	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 950 945 .
Chr1	stalkie_big_nohaplotig	exon	83445697	83445698	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 952 951 .
Chr1	stalkie_big_nohaplotig	exon	83448111	83448116	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 958 953 .
Chr1	stalkie_big_nohaplotig	exon	83454879	83454880	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 960 959 .
Chr1	stalkie_big_nohaplotig	exon	83462797	83462803	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 967 961 .
Chr1	stalkie_big_nohaplotig	exon	83468349	83468363	52	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 992 968 .
Chr1	stalkie_big_nohaplotig	exon	83471436	83471440	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 997 993 .
Chr1	stalkie_big_nohaplotig	exon	83526444	83526447	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1001 998 .
Chr1	stalkie_big_nohaplotig	exon	83534010	83534011	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1003 1002 .
Chr1	stalkie_big_nohaplotig	exon	83538199	83538209	90	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1013 1004 .
Chr1	stalkie_big_nohaplotig	exon	83546655	83546663	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1022 1014 .
Chr1	stalkie_big_nohaplotig	exon	83560645	83560657	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1051 1039 .
Chr1	stalkie_big_nohaplotig	exon	83567191	83567215	41	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1087 1059 .
Chr1	stalkie_big_nohaplotig	exon	83570788	83570792	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1092 1088 .
Chr1	stalkie_big_nohaplotig	exon	83574005	83574012	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1100 1093 .
Chr1	stalkie_big_nohaplotig	exon	83579202	83579203	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1102 1101 .
Chr1	stalkie_big_nohaplotig	exon	83607494	83607504	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1113 1103 .
Chr1	stalkie_big_nohaplotig	exon	83610525	83610527	66	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1134 1132 .
Chr1	stalkie_big_nohaplotig	exon	83611304	83611321	88	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1152 1135 .
Chr1	stalkie_big_nohaplotig	exon	83612795	83612815	85	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1171 1153 .
Chr1	stalkie_big_nohaplotig	exon	83616072	83616088	88	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1188 1172 .
Chr1	stalkie_big_nohaplotig	exon	83622647	83622692	4	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1211 1209 .
Chr1	stalkie_big_nohaplotig	exon	83629091	83629094	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1215 1212 .
Chr1	stalkie_big_nohaplotig	exon	83630930	83630934	80	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1220 1216 .
Chr1	stalkie_big_nohaplotig	exon	83637866	83637871	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1226 1221 .
Chr1	stalkie_big_nohaplotig	exon	83644715	83644724	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1236 1227 .
Chr1	stalkie_big_nohaplotig	exon	83646174	83646178	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1241 1237 .
Chr1	stalkie_big_nohaplotig	exon	83649732	83649736	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1246 1242 .
Chr1	stalkie_big_nohaplotig	exon	83657882	83657886	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1251 1247 .
Chr1	stalkie_big_nohaplotig	exon	83658621	83658629	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1260 1252 .
Chr1	stalkie_big_nohaplotig	exon	83672830	83672834	80	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1265 1261 .
Chr1	stalkie_big_nohaplotig	exon	83711085	83711109	60	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1287 1266 .
Chr1	stalkie_big_nohaplotig	exon	83712131	83712136	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1293 1288 .
Chr1	stalkie_big_nohaplotig	exon	83719828	83719841	40	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1320 1294 .
Chr1	stalkie_big_nohaplotig	exon	83720541	83720550	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1330 1321 .
Chr1	stalkie_big_nohaplotig	exon	83748895	83748914	34	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1360 1335 .
Chr1	stalkie_big_nohaplotig	exon	83754549	83754571	54	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1395 1361 .
Chr1	stalkie_big_nohaplotig	exon	83759703	83759710	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1403 1396 .
Chr1	stalkie_big_nohaplotig	exon	83763032	83763037	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1409 1404 .
Chr1	stalkie_big_nohaplotig	exon	83763067	83763074	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1475 1468 .
Chr1	stalkie_big_nohaplotig	exon	83769256	83769262	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1482 1476 .
Chr1	stalkie_big_nohaplotig	exon	83780492	83780493	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1484 1483 .
Chr1	stalkie_big_nohaplotig	exon	83787128	83787138	90	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1495 1485 .
Chr1	stalkie_big_nohaplotig	exon	83789537	83789545	77	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1504 1496 .
Chr1	stalkie_big_nohaplotig	exon	83796628	83796640	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1517 1505 .
Chr1	stalkie_big_nohaplotig	exon	83815480	83815487	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1765 1758 .
Chr1	stalkie_big_nohaplotig	exon	83835189	83835198	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1775 1766 .
Chr1	stalkie_big_nohaplotig	exon	83848462	83848465	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1784 1781 .
Chr1	stalkie_big_nohaplotig	exon	83849215	83849223	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1793 1785 .
Chr1	stalkie_big_nohaplotig	exon	83864167	83864178	75	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1809 1794 .
Chr1	stalkie_big_nohaplotig	exon	83865354	83865355	50	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1811 1810 .
Chr1	stalkie_big_nohaplotig	exon	83886644	83886655	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1823 1812 .
Chr1	stalkie_big_nohaplotig	exon	83886698	83886705	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 1950 1943 .
Chr1	stalkie_big_nohaplotig	exon	83887535	83887542	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2028 2021 .
Chr1	stalkie_big_nohaplotig	exon	83891034	83891038	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2033 2029 .
Chr1	stalkie_big_nohaplotig	exon	83893685	83893694	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2043 2034 .
Chr1	stalkie_big_nohaplotig	exon	83899928	83899966	45	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2128 2089 .
Chr1	stalkie_big_nohaplotig	exon	83910800	83910802	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2132 2130 .
Chr1	stalkie_big_nohaplotig	exon	83933784	83933788	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2137 2133 .
Chr1	stalkie_big_nohaplotig	exon	83940116	83940125	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2147 2138 .
Chr1	stalkie_big_nohaplotig	exon	83940131	83940139	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2157 2149 .
Chr1	stalkie_big_nohaplotig	exon	83953700	83953712	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2193 2181 .
Chr1	stalkie_big_nohaplotig	exon	83957385	83957398	78	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2207 2194 .
Chr1	stalkie_big_nohaplotig	exon	83959319	83959324	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2218 2213 .
Chr1	stalkie_big_nohaplotig	exon	83965193	83965197	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2223 2219 .
Chr1	stalkie_big_nohaplotig	exon	83966881	83966887	71	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2230 2224 .
Chr1	stalkie_big_nohaplotig	exon	83972112	83972113	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2232 2231 .
Chr1	stalkie_big_nohaplotig	exon	83977702	83977703	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2234 2233 .
Chr1	stalkie_big_nohaplotig	exon	83982719	83982727	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2243 2235 .
Chr1	stalkie_big_nohaplotig	exon	83983107	83983115	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2252 2244 .
Chr1	stalkie_big_nohaplotig	exon	83996737	83996776	60	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2285 2253 .
Chr1	stalkie_big_nohaplotig	exon	84001811	84001821	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2301 2291 .
Chr1	stalkie_big_nohaplotig	exon	84003070	84003077	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2314 2307 .
Chr1	stalkie_big_nohaplotig	exon	84003079	84003085	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2350 2344 .
Chr1	stalkie_big_nohaplotig	exon	84007963	84007971	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2359 2351 .
Chr1	stalkie_big_nohaplotig	exon	84023956	84023958	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2362 2360 .
Chr1	stalkie_big_nohaplotig	exon	84031610	84031614	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2367 2363 .
Chr1	stalkie_big_nohaplotig	exon	84034143	84034149	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2374 2368 .
Chr1	stalkie_big_nohaplotig	exon	84035824	84035838	73	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2387 2375 .
Chr1	stalkie_big_nohaplotig	exon	84040487	84040491	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2392 2388 .
Chr1	stalkie_big_nohaplotig	exon	84052512	84052520	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2401 2393 .
Chr1	stalkie_big_nohaplotig	exon	84083122	84083125	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2430 2427 .
Chr1	stalkie_big_nohaplotig	exon	84105716	84105724	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2439 2431 .
Chr1	stalkie_big_nohaplotig	exon	84113635	84113647	76	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2452 2440 .
Chr1	stalkie_big_nohaplotig	exon	84120117	84120125	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2537 2529 .
Chr1	stalkie_big_nohaplotig	exon	84120619	84120630	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2550 2539 .
Chr1	stalkie_big_nohaplotig	exon	84320607	84320609	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2569 2567 .
Chr1	stalkie_big_nohaplotig	exon	84327867	84327900	59	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2623 2570 .
Chr1	stalkie_big_nohaplotig	exon	84332354	84332355	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2645 2644 .
Chr1	stalkie_big_nohaplotig	exon	84335109	84335110	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2647 2646 .
Chr1	stalkie_big_nohaplotig	exon	84340435	84340448	35	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2652 2648 .
Chr1	stalkie_big_nohaplotig	exon	84348079	84348086	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2660 2653 .
Chr1	stalkie_big_nohaplotig	exon	84351571	84351579	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 2669 2661 .
Chr1	stalkie_big_nohaplotig	exon	84351674	84352455	94	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 3454 2670 .
Chr1	stalkie_big_nohaplotig	exon	84356079	84356168	98	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 3545 3455 .
Chr1	stalkie_big_nohaplotig	exon	84356224	84356378	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 3700 3546 .
Chr1	stalkie_big_nohaplotig	exon	84381334	84381450	100	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 3817 3701 .
Chr1	stalkie_big_nohaplotig	exon	84381506	84382131	99	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 4444 3818 .
Chr1	stalkie_big_nohaplotig	exon	84382185	84382471	99	+	.	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 4731 4445 .
Chr1	stalkie_big_nohaplotig	CDS	84352335	84352455	.	+	0	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 3454 3334 .
Chr1	stalkie_big_nohaplotig	CDS	84356079	84356097	.	+	2	Parent=comp155038_c0_seq1.mrna1;Target=comp155038_c0_seq1 3474 3455 .
Chr1	stalkie_big_nohaplotig	mRNA	83429942	83440410	.	+	.	ID=comp163980_c0_seq1.mrna1;geneID=comp163980_c0_seq1.path1;Name=comp163980_c0_seq1;Dir=antisensecoverage=100.0;identity=98.0;matches=5585;mismatches=76;indels=38;unknowns=0;Target=comp163980_c0_seq1 5301 5663 .;locus=RLOC_00009193
Chr1	stalkie_big_nohaplotig	exon	83429942	83430721	98	+	.	Parent=comp163980_c0_seq1.mrna1;Target=comp163980_c0_seq1 4883 5663 -
Chr1	stalkie_big_nohaplotig	exon	83435493	83440410	97	+	.	Parent=comp163980_c0_seq1.mrna1;Target=comp163980_c0_seq1 2 4882 -
Chr1	stalkie_big_nohaplotig	CDS	83429942	83430304	.	+	0	Parent=comp163980_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	83454515	83455000	.	-	.	ID=comp161342_c2_seq1.mrna2;geneID=comp161342_c2_seq1.path2;Name=comp161342_c2_seq1;Dir=indeterminatecoverage=91.4;identity=94.1;matches=462;mismatches=24;indels=5;unknowns=0;Target=comp161342_c2_seq1 537 47 .;CDS_Target=comp161342_c2_seq1 537 49 .;locus=RLOC_00009193
Chr1	stalkie_big_nohaplotig	exon	83454515	83455000	94	-	.	Parent=comp161342_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	83454515	83454998	.	-	0	Parent=comp161342_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	83615321	83634258	.	+	.	ID=FBgn0030466.1.mrna1;geneID=FBgn0030466.1.path1;Name=FBgn0030466.1;Dir=sensecoverage=100.0;identity=99.9;matches=4784;mismatches=4;indels=0;unknowns=0;locus=RLOC_00009193
Chr1	stalkie_big_nohaplotig	exon	83615321	83615547	100	+	.	Parent=FBgn0030466.1.mrna1;Target=FBgn0030466.1 1 227 +
Chr1	stalkie_big_nohaplotig	exon	83615604	83615822	99	+	.	Parent=FBgn0030466.1.mrna1;Target=FBgn0030466.1 228 446 +
Chr1	stalkie_big_nohaplotig	exon	83629858	83630068	100	+	.	Parent=FBgn0030466.1.mrna1;Target=FBgn0030466.1 447 657 +
Chr1	stalkie_big_nohaplotig	exon	83630128	83634258	99	+	.	Parent=FBgn0030466.1.mrna1;Target=FBgn0030466.1 658 4788 +
Chr1	stalkie_big_nohaplotig	CDS	83615321	83615547	.	+	0	Parent=FBgn0030466.1.mrna1;Target=FBgn0030466.1 1 227 +
Chr1	stalkie_big_nohaplotig	CDS	83615604	83615822	.	+	1	Parent=FBgn0030466.1.mrna1;Target=FBgn0030466.1 228 446 +
Chr1	stalkie_big_nohaplotig	CDS	83629858	83630068	.	+	1	Parent=FBgn0030466.1.mrna1;Target=FBgn0030466.1 447 657 +
Chr1	stalkie_big_nohaplotig	CDS	83630128	83634258	.	+	0	Parent=FBgn0030466.1.mrna1;Target=FBgn0030466.1 658 4788 +
Chr1	stalkie_big_nohaplotig	mRNA	83624338	84735441	.	+	.	ID=comp158900_c4_seq1.mrna1;geneID=comp158900_c4_seq1.path1;Name=comp158900_c4_seq1;Dir=antisensecoverage=98.8;identity=97.6;matches=2807;mismatches=39;indels=29;unknowns=0;Target=comp158900_c4_seq1 644 835 .;locus=RLOC_00009193
Chr1	stalkie_big_nohaplotig	exon	83624338	83625339	100	+	.	Parent=comp158900_c4_seq1.mrna1;Target=comp158900_c4_seq1 2142 3143 -
Chr1	stalkie_big_nohaplotig	exon	83626189	83626197	88	+	.	Parent=comp158900_c4_seq1.mrna1;Target=comp158900_c4_seq1 2122 2130 -
Chr1	stalkie_big_nohaplotig	exon	83626375	83628003	99	+	.	Parent=comp158900_c4_seq1.mrna1;Target=comp158900_c4_seq1 493 2121 -
Chr1	stalkie_big_nohaplotig	exon	83631903	83631913	100	+	.	Parent=comp158900_c4_seq1.mrna1;Target=comp158900_c4_seq1 449 459 -
Chr1	stalkie_big_nohaplotig	exon	84661182	84661188	100	+	.	Parent=comp158900_c4_seq1.mrna1;Target=comp158900_c4_seq1 253 259 -
Chr1	stalkie_big_nohaplotig	exon	84662451	84662532	58	+	.	Parent=comp158900_c4_seq1.mrna1;Target=comp158900_c4_seq1 172 252 -
Chr1	stalkie_big_nohaplotig	exon	84675111	84675115	100	+	.	Parent=comp158900_c4_seq1.mrna1;Target=comp158900_c4_seq1 167 171 -
Chr1	stalkie_big_nohaplotig	exon	84680605	84680609	100	+	.	Parent=comp158900_c4_seq1.mrna1;Target=comp158900_c4_seq1 162 166 -
Chr1	stalkie_big_nohaplotig	exon	84692367	84692375	100	+	.	Parent=comp158900_c4_seq1.mrna1;Target=comp158900_c4_seq1 138 146 -
Chr1	stalkie_big_nohaplotig	exon	84700561	84700564	100	+	.	Parent=comp158900_c4_seq1.mrna1;Target=comp158900_c4_seq1 134 137 -
Chr1	stalkie_big_nohaplotig	exon	84705258	84705264	100	+	.	Parent=comp158900_c4_seq1.mrna1;Target=comp158900_c4_seq1 127 133 -
Chr1	stalkie_big_nohaplotig	exon	84710558	84710607	56	+	.	Parent=comp158900_c4_seq1.mrna1;Target=comp158900_c4_seq1 75 126 -
Chr1	stalkie_big_nohaplotig	exon	84717325	84717327	100	+	.	Parent=comp158900_c4_seq1.mrna1;Target=comp158900_c4_seq1 72 74 -
Chr1	stalkie_big_nohaplotig	exon	84718701	84718714	78	+	.	Parent=comp158900_c4_seq1.mrna1;Target=comp158900_c4_seq1 58 71 -
Chr1	stalkie_big_nohaplotig	exon	84730866	84730870	100	+	.	Parent=comp158900_c4_seq1.mrna1;Target=comp158900_c4_seq1 53 57 -
Chr1	stalkie_big_nohaplotig	exon	84735427	84735441	100	+	.	Parent=comp158900_c4_seq1.mrna1;Target=comp158900_c4_seq1 38 52 -
Chr1	stalkie_big_nohaplotig	CDS	83627661	83627852	.	+	0	Parent=comp158900_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84352432	84382258	.	+	.	ID=FBgn0052528.1.mrna1;geneID=FBgn0052528.1.path1;Name=FBgn0052528.1;Dir=sensecoverage=100.0;identity=99.9;matches=1004;mismatches=0;indels=1;unknowns=0;locus=RLOC_00009193
Chr1	stalkie_big_nohaplotig	exon	84352432	84352455	100	+	.	Parent=FBgn0052528.1.mrna1;Target=FBgn0052528.1 1 24 +
Chr1	stalkie_big_nohaplotig	exon	84356079	84356168	98	+	.	Parent=FBgn0052528.1.mrna1;Target=FBgn0052528.1 25 115 +
Chr1	stalkie_big_nohaplotig	exon	84356224	84356378	100	+	.	Parent=FBgn0052528.1.mrna1;Target=FBgn0052528.1 116 270 +
Chr1	stalkie_big_nohaplotig	exon	84381334	84381450	100	+	.	Parent=FBgn0052528.1.mrna1;Target=FBgn0052528.1 271 387 +
Chr1	stalkie_big_nohaplotig	exon	84381506	84381690	100	+	.	Parent=FBgn0052528.1.mrna1;Target=FBgn0052528.1 388 572 +
Chr1	stalkie_big_nohaplotig	exon	84381773	84382131	100	+	.	Parent=FBgn0052528.1.mrna1;Target=FBgn0052528.1 573 931 +
Chr1	stalkie_big_nohaplotig	exon	84382185	84382258	100	+	.	Parent=FBgn0052528.1.mrna1;Target=FBgn0052528.1 932 1005 +
Chr1	stalkie_big_nohaplotig	CDS	84352434	84352455	.	+	0	Parent=FBgn0052528.1.mrna1;Target=FBgn0052528.1 3 24 +
Chr1	stalkie_big_nohaplotig	CDS	84356079	84356097	.	+	2	Parent=FBgn0052528.1.mrna1;Target=FBgn0052528.1 25 44 +
Chr1	stalkie_big_nohaplotig	mRNA	84356355	84357490	.	+	.	ID=comp155955_c0_seq1.mrna2;geneID=comp155955_c0_seq1.path2;Name=comp155955_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1129;mismatches=7;indels=5;unknowns=0;Target=comp155955_c0_seq1 1141 1 .;CDS_Target=comp155955_c0_seq1 811 656 .;locus=RLOC_00009193
Chr1	stalkie_big_nohaplotig	exon	84356355	84357490	98	+	.	Parent=comp155955_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	84357010	84357165	.	+	0	Parent=comp155955_c0_seq1.mrna2
Chr1	gffcl	locus	83303790	83305011	.	-	.	ID=RLOC_00009194;geneIDs=comp203844_c0_seq1.path1;transcripts=comp203844_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	83303790	83305011	.	-	.	ID=comp203844_c0_seq1.mrna1;geneID=comp203844_c0_seq1.path1;Name=comp203844_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1221;mismatches=1;indels=0;unknowns=0;Target=comp203844_c0_seq1 1222 1 .;CDS_Target=comp203844_c0_seq1 1074 343 .;locus=RLOC_00009194
Chr1	stalkie_big_nohaplotig	exon	83303790	83305011	99	-	.	Parent=comp203844_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	83303938	83304669	.	-	0	Parent=comp203844_c0_seq1.mrna1
Chr1	gffcl	locus	83315535	83316361	.	+	.	ID=RLOC_00009195;geneIDs=FBgn0000394.1.path1;transcripts=FBgn0000394.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	83315535	83316361	.	+	.	ID=FBgn0000394.1.mrna1;geneID=FBgn0000394.1.path1;Name=FBgn0000394.1;Dir=sensecoverage=76.9;identity=99.8;matches=622;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009195
Chr1	stalkie_big_nohaplotig	exon	83315535	83315811	99	+	.	Parent=FBgn0000394.1.mrna1;Target=FBgn0000394.1 1 277 +
Chr1	stalkie_big_nohaplotig	exon	83315962	83316162	100	+	.	Parent=FBgn0000394.1.mrna1;Target=FBgn0000394.1 278 478 +
Chr1	stalkie_big_nohaplotig	exon	83316217	83316361	100	+	.	Parent=FBgn0000394.1.mrna1;Target=FBgn0000394.1 479 623 +
Chr1	stalkie_big_nohaplotig	CDS	83315535	83315811	.	+	0	Parent=FBgn0000394.1.mrna1;Target=FBgn0000394.1 1 277 +
Chr1	stalkie_big_nohaplotig	CDS	83315962	83316162	.	+	2	Parent=FBgn0000394.1.mrna1;Target=FBgn0000394.1 278 478 +
Chr1	stalkie_big_nohaplotig	CDS	83316217	83316361	.	+	2	Parent=FBgn0000394.1.mrna1;Target=FBgn0000394.1 479 623 +
Chr1	gffcl	locus	83387963	83410544	.	+	.	ID=RLOC_00009196;geneIDs=FBgn0030394.1.path1;transcripts=FBgn0030394.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	83387963	83410544	.	+	.	ID=FBgn0030394.1.mrna1;geneID=FBgn0030394.1.path1;Name=FBgn0030394.1;Dir=sensecoverage=100.0;identity=100.0;matches=711;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009196
Chr1	stalkie_big_nohaplotig	exon	83387963	83387998	100	+	.	Parent=FBgn0030394.1.mrna1;Target=FBgn0030394.1 1 36 +
Chr1	stalkie_big_nohaplotig	exon	83388318	83388532	100	+	.	Parent=FBgn0030394.1.mrna1;Target=FBgn0030394.1 37 251 +
Chr1	stalkie_big_nohaplotig	exon	83388747	83388926	100	+	.	Parent=FBgn0030394.1.mrna1;Target=FBgn0030394.1 252 431 +
Chr1	stalkie_big_nohaplotig	exon	83410184	83410411	100	+	.	Parent=FBgn0030394.1.mrna1;Target=FBgn0030394.1 432 659 +
Chr1	stalkie_big_nohaplotig	exon	83410493	83410544	100	+	.	Parent=FBgn0030394.1.mrna1;Target=FBgn0030394.1 660 711 +
Chr1	stalkie_big_nohaplotig	CDS	83387963	83387998	.	+	0	Parent=FBgn0030394.1.mrna1;Target=FBgn0030394.1 1 36 +
Chr1	stalkie_big_nohaplotig	CDS	83388318	83388532	.	+	0	Parent=FBgn0030394.1.mrna1;Target=FBgn0030394.1 37 251 +
Chr1	stalkie_big_nohaplotig	CDS	83388747	83388926	.	+	1	Parent=FBgn0030394.1.mrna1;Target=FBgn0030394.1 252 431 +
Chr1	stalkie_big_nohaplotig	CDS	83410184	83410411	.	+	1	Parent=FBgn0030394.1.mrna1;Target=FBgn0030394.1 432 659 +
Chr1	stalkie_big_nohaplotig	CDS	83410493	83410544	.	+	1	Parent=FBgn0030394.1.mrna1;Target=FBgn0030394.1 660 711 +
Chr1	gffcl	locus	83559057	83612451	.	-	.	ID=RLOC_00009197;geneIDs=comp161913_c0_seq1.path1;transcripts=comp161913_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	83559057	83612451	.	-	.	ID=comp161913_c0_seq1.mrna1;geneID=comp161913_c0_seq1.path1;Name=comp161913_c0_seq1;Dir=indeterminatecoverage=91.1;identity=97.9;matches=936;mismatches=18;indels=2;unknowns=0;Target=comp161913_c0_seq1 499 476 .;locus=RLOC_00009197
Chr1	stalkie_big_nohaplotig	exon	83559057	83559058	100	-	.	Parent=comp161913_c0_seq1.mrna1;Target=comp161913_c0_seq1 993 992 .
Chr1	stalkie_big_nohaplotig	exon	83562818	83562821	100	-	.	Parent=comp161913_c0_seq1.mrna1;Target=comp161913_c0_seq1 991 988 .
Chr1	stalkie_big_nohaplotig	exon	83592317	83592320	100	-	.	Parent=comp161913_c0_seq1.mrna1;Target=comp161913_c0_seq1 987 984 .
Chr1	stalkie_big_nohaplotig	exon	83595889	83595891	100	-	.	Parent=comp161913_c0_seq1.mrna1;Target=comp161913_c0_seq1 983 981 .
Chr1	stalkie_big_nohaplotig	exon	83597900	83597957	94	-	.	Parent=comp161913_c0_seq1.mrna1;Target=comp161913_c0_seq1 980 923 .
Chr1	stalkie_big_nohaplotig	exon	83611569	83612451	98	-	.	Parent=comp161913_c0_seq1.mrna1;Target=comp161913_c0_seq1 922 38 .
Chr1	stalkie_big_nohaplotig	CDS	83611992	83612013	.	-	0	Parent=comp161913_c0_seq1.mrna1
Chr1	gffcl	locus	83618494	83619469	.	+	.	ID=RLOC_00009198;geneIDs=comp162393_c0_seq1.path1;transcripts=comp162393_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	83618494	83619469	.	+	.	ID=comp162393_c0_seq1.mrna1;geneID=comp162393_c0_seq1.path1;Name=comp162393_c0_seq1;Dir=indeterminatecoverage=90.4;identity=100.0;matches=976;mismatches=0;indels=0;unknowns=0;Target=comp162393_c0_seq1 976 1 .;CDS_Target=comp162393_c0_seq1 567 364 .;locus=RLOC_00009198
Chr1	stalkie_big_nohaplotig	exon	83618494	83619469	100	+	.	Parent=comp162393_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	83618857	83619060	.	+	0	Parent=comp162393_c0_seq1.mrna1
Chr1	gffcl	locus	83636530	83636921	.	-	.	ID=RLOC_00009199;geneIDs=comp137877_c0_seq1.path1;transcripts=comp137877_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	83636530	83636921	.	-	.	ID=comp137877_c0_seq1.mrna1;geneID=comp137877_c0_seq1.path1;Name=comp137877_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=391;mismatches=1;indels=0;unknowns=0;Target=comp137877_c0_seq1 393 2 .;CDS_Target=comp137877_c0_seq1 308 114 .;locus=RLOC_00009199
Chr1	stalkie_big_nohaplotig	exon	83636530	83636921	99	-	.	Parent=comp137877_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	83636615	83636809	.	-	0	Parent=comp137877_c0_seq1.mrna1
Chr1	gffcl	locus	83674282	83674970	.	-	.	ID=RLOC_00009200;geneIDs=comp157882_c2_seq1.path3;transcripts=comp157882_c2_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	83674282	83674970	.	-	.	ID=comp157882_c2_seq1.mrna3;geneID=comp157882_c2_seq1.path3;Name=comp157882_c2_seq1;Dir=sensecoverage=99.8;identity=83.7;matches=565;mismatches=54;indels=56;unknowns=0;Target=comp157882_c2_seq1 4 54 +;locus=RLOC_00009200
Chr1	stalkie_big_nohaplotig	exon	83674282	83674674	86	-	.	Parent=comp157882_c2_seq1.mrna3;Target=comp157882_c2_seq1 271 659 +
Chr1	stalkie_big_nohaplotig	exon	83674728	83674970	79	-	.	Parent=comp157882_c2_seq1.mrna3;Target=comp157882_c2_seq1 2 270 +
Chr1	stalkie_big_nohaplotig	CDS	83674917	83674968	.	-	0	Parent=comp157882_c2_seq1.mrna3
Chr1	gffcl	locus	83699181	83701024	.	-	.	ID=RLOC_00009201;geneIDs=comp162667_c0_seq1.path2;transcripts=comp162667_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	83699181	83701024	.	-	.	ID=comp162667_c0_seq1.mrna2;geneID=comp162667_c0_seq1.path2;Name=comp162667_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=1795;mismatches=49;indels=12;unknowns=0;Target=comp162667_c0_seq1 1856 1 .;CDS_Target=comp162667_c0_seq1 1371 1 .;locus=RLOC_00009201
Chr1	stalkie_big_nohaplotig	exon	83699181	83701024	96	-	.	Parent=comp162667_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	83699654	83701024	.	-	0	Parent=comp162667_c0_seq1.mrna2
Chr1	gffcl	locus	83706733	83707184	.	+	.	ID=RLOC_00009202;geneIDs=comp115094_c0_seq1.path1;transcripts=comp115094_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	83706733	83707184	.	+	.	ID=comp115094_c0_seq1.mrna1;geneID=comp115094_c0_seq1.path1;Name=comp115094_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.9;matches=448;mismatches=4;indels=1;unknowns=0;Target=comp115094_c0_seq1 453 1 .;CDS_Target=comp115094_c0_seq1 290 3 .;locus=RLOC_00009202
Chr1	stalkie_big_nohaplotig	exon	83706733	83707184	98	+	.	Parent=comp115094_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	83706735	83707022	.	+	0	Parent=comp115094_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	83708592	83858469	.	+	.	ID=FBgn0250788.1.mrna2;geneID=FBgn0250788.1.path2;Name=FBgn0250788.1;Dir=indeterminatecoverage=96.3;identity=99.1;matches=6542;mismatches=21;indels=38;unknowns=0;locus=RLOC_00009203
Chr1	stalkie_big_nohaplotig	exon	83708592	83708596	100	+	.	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 261 257 .
Chr1	stalkie_big_nohaplotig	exon	83711942	83711947	100	+	.	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 267 262 .
Chr1	stalkie_big_nohaplotig	exon	83740953	83740963	100	+	.	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 278 268 .
Chr1	stalkie_big_nohaplotig	exon	83760059	83760073	78	+	.	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 297 279 .
Chr1	stalkie_big_nohaplotig	exon	83763466	83763478	76	+	.	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 310 298 .
Chr1	stalkie_big_nohaplotig	exon	83778489	83778491	100	+	.	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 313 311 .
Chr1	stalkie_big_nohaplotig	exon	83784571	83784580	80	+	.	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 322 314 .
Chr1	stalkie_big_nohaplotig	exon	83793103	83793111	88	+	.	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 331 323 .
Chr1	stalkie_big_nohaplotig	exon	83796148	83796153	83	+	.	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 337 332 .
Chr1	stalkie_big_nohaplotig	exon	83801639	83801651	69	+	.	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 346 338 .
Chr1	stalkie_big_nohaplotig	exon	83807149	83807163	42	+	.	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 388 361 .
Chr1	stalkie_big_nohaplotig	exon	83808663	83808699	47	+	.	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 441 389 .
Chr1	stalkie_big_nohaplotig	exon	83831997	83832005	100	+	.	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 450 442 .
Chr1	stalkie_big_nohaplotig	exon	83840107	83840110	100	+	.	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 469 466 .
Chr1	stalkie_big_nohaplotig	exon	83849582	83855170	100	+	.	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 6058 470 .
Chr1	stalkie_big_nohaplotig	exon	83855225	83855421	100	+	.	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 6255 6059 .
Chr1	stalkie_big_nohaplotig	exon	83855476	83855644	100	+	.	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 6424 6256 .
Chr1	stalkie_big_nohaplotig	exon	83857882	83857985	100	+	.	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 6528 6425 .
Chr1	stalkie_big_nohaplotig	exon	83858067	83858233	100	+	.	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 6695 6529 .
Chr1	stalkie_big_nohaplotig	exon	83858286	83858469	100	+	.	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 6879 6696 .
Chr1	stalkie_big_nohaplotig	CDS	83849662	83855170	.	+	0	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 6058 550 .
Chr1	stalkie_big_nohaplotig	CDS	83855225	83855421	.	+	2	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 6255 6059 .
Chr1	stalkie_big_nohaplotig	CDS	83855476	83855644	.	+	0	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 6424 6256 .
Chr1	stalkie_big_nohaplotig	CDS	83857882	83857985	.	+	2	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 6528 6425 .
Chr1	stalkie_big_nohaplotig	CDS	83858067	83858233	.	+	0	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 6695 6529 .
Chr1	stalkie_big_nohaplotig	CDS	83858286	83858469	.	+	1	Parent=FBgn0250788.1.mrna2;Target=FBgn0250788.1 6879 6696 .
Chr1	stalkie_big_nohaplotig	mRNA	83855622	83873986	.	+	.	ID=comp118715_c0_seq1.mrna1;geneID=comp118715_c0_seq1.path1;Name=comp118715_c0_seq1;Dir=indeterminatecoverage=96.4;identity=99.2;matches=479;mismatches=4;indels=0;unknowns=0;Target=comp118715_c0_seq1 284 207 .;locus=RLOC_00009203
Chr1	stalkie_big_nohaplotig	exon	83855622	83856069	99	+	.	Parent=comp118715_c0_seq1.mrna1;Target=comp118715_c0_seq1 448 1 .
Chr1	stalkie_big_nohaplotig	exon	83857217	83857222	83	+	.	Parent=comp118715_c0_seq1.mrna1;Target=comp118715_c0_seq1 454 449 .
Chr1	stalkie_big_nohaplotig	exon	83857698	83857704	71	+	.	Parent=comp118715_c0_seq1.mrna1;Target=comp118715_c0_seq1 461 455 .
Chr1	stalkie_big_nohaplotig	exon	83858451	83858456	100	+	.	Parent=comp118715_c0_seq1.mrna1;Target=comp118715_c0_seq1 467 462 .
Chr1	stalkie_big_nohaplotig	exon	83865929	83865932	100	+	.	Parent=comp118715_c0_seq1.mrna1;Target=comp118715_c0_seq1 471 468 .
Chr1	stalkie_big_nohaplotig	exon	83873975	83873986	100	+	.	Parent=comp118715_c0_seq1.mrna1;Target=comp118715_c0_seq1 483 472 .
Chr1	stalkie_big_nohaplotig	CDS	83855828	83855905	.	+	0	Parent=comp118715_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	83856498	83857291	.	+	.	ID=comp147663_c1_seq1.mrna1;geneID=comp147663_c1_seq1.path1;Name=comp147663_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=793;mismatches=1;indels=0;unknowns=0;Target=comp147663_c1_seq1 794 1 .;CDS_Target=comp147663_c1_seq1 330 208 .;locus=RLOC_00009203
Chr1	stalkie_big_nohaplotig	exon	83856498	83857291	99	+	.	Parent=comp147663_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	83856705	83856827	.	+	0	Parent=comp147663_c1_seq1.mrna1
Chr1	gffcl	locus	83732781	83733889	.	+	.	ID=RLOC_00009205;geneIDs=FBgn0029935.1.path1;transcripts=FBgn0029935.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	83732781	83733889	.	+	.	ID=FBgn0029935.1.mrna1;geneID=FBgn0029935.1.path1;Name=FBgn0029935.1;Dir=sensecoverage=100.0;identity=99.9;matches=866;mismatches=0;indels=1;unknowns=0;locus=RLOC_00009205
Chr1	stalkie_big_nohaplotig	exon	83732781	83732795	100	+	.	Parent=FBgn0029935.1.mrna1;Target=FBgn0029935.1 1 15 +
Chr1	stalkie_big_nohaplotig	exon	83732869	83733078	100	+	.	Parent=FBgn0029935.1.mrna1;Target=FBgn0029935.1 16 225 +
Chr1	stalkie_big_nohaplotig	exon	83733138	83733328	100	+	.	Parent=FBgn0029935.1.mrna1;Target=FBgn0029935.1 226 416 +
Chr1	stalkie_big_nohaplotig	exon	83733384	83733549	100	+	.	Parent=FBgn0029935.1.mrna1;Target=FBgn0029935.1 417 582 +
Chr1	stalkie_big_nohaplotig	exon	83733606	83733889	99	+	.	Parent=FBgn0029935.1.mrna1;Target=FBgn0029935.1 583 867 +
Chr1	stalkie_big_nohaplotig	CDS	83732781	83732795	.	+	0	Parent=FBgn0029935.1.mrna1;Target=FBgn0029935.1 1 15 +
Chr1	stalkie_big_nohaplotig	CDS	83732869	83733078	.	+	0	Parent=FBgn0029935.1.mrna1;Target=FBgn0029935.1 16 225 +
Chr1	stalkie_big_nohaplotig	CDS	83733138	83733328	.	+	0	Parent=FBgn0029935.1.mrna1;Target=FBgn0029935.1 226 416 +
Chr1	stalkie_big_nohaplotig	CDS	83733384	83733549	.	+	1	Parent=FBgn0029935.1.mrna1;Target=FBgn0029935.1 417 582 +
Chr1	stalkie_big_nohaplotig	CDS	83733606	83733889	.	+	0	Parent=FBgn0029935.1.mrna1;Target=FBgn0029935.1 583 867 +
Chr1	gffcl	locus	83804173	85781873	.	-	.	ID=RLOC_00009206;geneIDs=comp146749_c1_seq1.path1;transcripts=comp146749_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	83804173	85781873	.	-	.	ID=comp146749_c1_seq1.mrna1;geneID=comp146749_c1_seq1.path1;Name=comp146749_c1_seq1;Dir=indeterminatecoverage=76.8;identity=98.2;matches=585;mismatches=11;indels=0;unknowns=0;Target=comp146749_c1_seq1 242 15 .;locus=RLOC_00009206
Chr1	stalkie_big_nohaplotig	exon	83804173	83804180	100	-	.	Parent=comp146749_c1_seq1.mrna1;Target=comp146749_c1_seq1 608 601 .
Chr1	stalkie_big_nohaplotig	exon	84022594	84022603	100	-	.	Parent=comp146749_c1_seq1.mrna1;Target=comp146749_c1_seq1 600 591 .
Chr1	stalkie_big_nohaplotig	exon	84035496	84035499	100	-	.	Parent=comp146749_c1_seq1.mrna1;Target=comp146749_c1_seq1 590 587 .
Chr1	stalkie_big_nohaplotig	exon	84051854	84051860	100	-	.	Parent=comp146749_c1_seq1.mrna1;Target=comp146749_c1_seq1 586 580 .
Chr1	stalkie_big_nohaplotig	exon	84055082	84055089	100	-	.	Parent=comp146749_c1_seq1.mrna1;Target=comp146749_c1_seq1 579 572 .
Chr1	stalkie_big_nohaplotig	exon	84060549	84060553	100	-	.	Parent=comp146749_c1_seq1.mrna1;Target=comp146749_c1_seq1 571 567 .
Chr1	stalkie_big_nohaplotig	exon	84062444	84062451	100	-	.	Parent=comp146749_c1_seq1.mrna1;Target=comp146749_c1_seq1 566 559 .
Chr1	stalkie_big_nohaplotig	exon	84069050	84069059	90	-	.	Parent=comp146749_c1_seq1.mrna1;Target=comp146749_c1_seq1 558 549 .
Chr1	stalkie_big_nohaplotig	exon	84073423	84073431	100	-	.	Parent=comp146749_c1_seq1.mrna1;Target=comp146749_c1_seq1 548 540 .
Chr1	stalkie_big_nohaplotig	exon	84074119	84074122	100	-	.	Parent=comp146749_c1_seq1.mrna1;Target=comp146749_c1_seq1 539 536 .
Chr1	stalkie_big_nohaplotig	exon	85781351	85781873	98	-	.	Parent=comp146749_c1_seq1.mrna1;Target=comp146749_c1_seq1 535 13 .
Chr1	stalkie_big_nohaplotig	CDS	85781644	85781871	.	-	0	Parent=comp146749_c1_seq1.mrna1
Chr1	gffcl	locus	83880035	83880847	.	-	.	ID=RLOC_00009207;geneIDs=ORF2745.path3;transcripts=ORF2745.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	83880035	83880847	.	-	.	ID=ORF2745.mrna3;geneID=ORF2745.path3;Name=ORF2745;Dir=indeterminatecoverage=100.0;identity=98.8;matches=803;mismatches=10;indels=0;unknowns=0;Target=ORF2745 813 1 .;locus=RLOC_00009207
Chr1	stalkie_big_nohaplotig	exon	83880035	83880847	98	-	.	Parent=ORF2745.mrna3
Chr1	stalkie_big_nohaplotig	CDS	83880035	83880847	.	-	0	Parent=ORF2745.mrna3
Chr1	gffcl	locus	83922242	83922444	.	-	.	ID=RLOC_00009208;geneIDs=comp145658_c0_seq1.path2;transcripts=comp145658_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	83922242	83922444	.	-	.	ID=comp145658_c0_seq1.mrna2;geneID=comp145658_c0_seq1.path2;Name=comp145658_c0_seq1;Dir=indeterminatecoverage=60.1;identity=100.0;matches=203;mismatches=0;indels=0;unknowns=0;Target=comp145658_c0_seq1 325 123 .;CDS_Target=comp145658_c0_seq1 281 147 .;locus=RLOC_00009208
Chr1	stalkie_big_nohaplotig	exon	83922242	83922444	100	-	.	Parent=comp145658_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	83922286	83922420	.	-	0	Parent=comp145658_c0_seq1.mrna2
Chr1	gffcl	locus	83953182	83953526	.	+	.	ID=RLOC_00009209;geneIDs=comp703425_c0_seq1.path1;transcripts=comp703425_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	83953182	83953526	.	+	.	ID=comp703425_c0_seq1.mrna1;geneID=comp703425_c0_seq1.path1;Name=comp703425_c0_seq1;Dir=indeterminatecoverage=93.8;identity=100.0;matches=345;mismatches=0;indels=0;unknowns=0;Target=comp703425_c0_seq1 346 2 .;CDS_Target=comp703425_c0_seq1 84 34 .;locus=RLOC_00009209
Chr1	stalkie_big_nohaplotig	exon	83953182	83953526	100	+	.	Parent=comp703425_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	83953214	83953264	.	+	0	Parent=comp703425_c0_seq1.mrna1
Chr1	gffcl	locus	83994709	83995595	.	-	.	ID=RLOC_00009210;geneIDs=comp113068_c0_seq1.path1;transcripts=comp113068_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	83994709	83995595	.	-	.	ID=comp113068_c0_seq1.mrna1;geneID=comp113068_c0_seq1.path1;Name=comp113068_c0_seq1;Dir=indeterminatecoverage=96.7;identity=100.0;matches=887;mismatches=0;indels=0;unknowns=0;Target=comp113068_c0_seq1 888 2 .;CDS_Target=comp113068_c0_seq1 124 62 .;locus=RLOC_00009210
Chr1	stalkie_big_nohaplotig	exon	83994709	83995595	100	-	.	Parent=comp113068_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	83995473	83995535	.	-	0	Parent=comp113068_c0_seq1.mrna1
Chr1	gffcl	locus	83995718	83996174	.	+	.	ID=RLOC_00009211;geneIDs=comp97709_c0_seq1.path2;transcripts=comp97709_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	83995718	83996174	.	+	.	ID=comp97709_c0_seq1.mrna2;geneID=comp97709_c0_seq1.path2;Name=comp97709_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=451;mismatches=6;indels=0;unknowns=0;Target=comp97709_c0_seq1 457 1 .;CDS_Target=comp97709_c0_seq1 247 206 .;locus=RLOC_00009211
Chr1	stalkie_big_nohaplotig	exon	83995718	83996174	98	+	.	Parent=comp97709_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	83995923	83995964	.	+	0	Parent=comp97709_c0_seq1.mrna2
Chr1	gffcl	locus	84078237	84078809	.	+	.	ID=RLOC_00009213;geneIDs=FBgn0029785.1.path1;transcripts=FBgn0029785.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84078237	84078809	.	+	.	ID=FBgn0029785.1.mrna1;geneID=FBgn0029785.1.path1;Name=FBgn0029785.1;Dir=sensecoverage=100.0;identity=100.0;matches=381;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009213
Chr1	stalkie_big_nohaplotig	exon	84078237	84078251	100	+	.	Parent=FBgn0029785.1.mrna1;Target=FBgn0029785.1 1 15 +
Chr1	stalkie_big_nohaplotig	exon	84078393	84078529	100	+	.	Parent=FBgn0029785.1.mrna1;Target=FBgn0029785.1 16 152 +
Chr1	stalkie_big_nohaplotig	exon	84078581	84078809	100	+	.	Parent=FBgn0029785.1.mrna1;Target=FBgn0029785.1 153 381 +
Chr1	stalkie_big_nohaplotig	CDS	84078237	84078251	.	+	0	Parent=FBgn0029785.1.mrna1;Target=FBgn0029785.1 1 15 +
Chr1	stalkie_big_nohaplotig	CDS	84078393	84078529	.	+	0	Parent=FBgn0029785.1.mrna1;Target=FBgn0029785.1 16 152 +
Chr1	stalkie_big_nohaplotig	CDS	84078581	84078809	.	+	1	Parent=FBgn0029785.1.mrna1;Target=FBgn0029785.1 153 381 +
Chr1	gffcl	locus	84087763	84088074	.	+	.	ID=RLOC_00009214;geneIDs=comp160381_c0_seq1.path1;transcripts=comp160381_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84087763	84088074	.	+	.	ID=comp160381_c0_seq1.mrna1;geneID=comp160381_c0_seq1.path1;Name=comp160381_c0_seq1;Dir=indeterminatecoverage=83.8;identity=63.2;matches=307;mismatches=5;indels=174;unknowns=0;Target=comp160381_c0_seq1 486 1 .;CDS_Target=comp160381_c0_seq1 412 365 .;locus=RLOC_00009214
Chr1	stalkie_big_nohaplotig	exon	84087763	84088074	63	+	.	Parent=comp160381_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	84087953	84088000	.	+	0	Parent=comp160381_c0_seq1.mrna1
Chr1	gffcl	locus	84138221	84139424	.	+	.	ID=RLOC_00009215;geneIDs=comp139252_c0_seq1.path1;transcripts=comp139252_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84138221	84139424	.	+	.	ID=comp139252_c0_seq1.mrna1;geneID=comp139252_c0_seq1.path1;Name=comp139252_c0_seq1;Dir=sensecoverage=96.5;identity=99.9;matches=779;mismatches=1;indels=0;unknowns=0;Target=comp139252_c0_seq1 29 271 +;locus=RLOC_00009215
Chr1	stalkie_big_nohaplotig	exon	84138221	84138977	99	+	.	Parent=comp139252_c0_seq1.mrna1;Target=comp139252_c0_seq1 29 785 +
Chr1	stalkie_big_nohaplotig	exon	84139402	84139424	100	+	.	Parent=comp139252_c0_seq1.mrna1;Target=comp139252_c0_seq1 786 808 +
Chr1	stalkie_big_nohaplotig	CDS	84138221	84138463	.	+	0	Parent=comp139252_c0_seq1.mrna1
Chr1	gffcl	locus	84140169	84143216	.	-	.	ID=RLOC_00009216;geneIDs=FBgn0015799.1.path1;transcripts=FBgn0015799.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84140169	84143216	.	-	.	ID=FBgn0015799.1.mrna1;geneID=FBgn0015799.1.path1;Name=FBgn0015799.1;Dir=sensecoverage=100.0;identity=100.0;matches=2213;mismatches=0;indels=1;unknowns=0;Target=FBgn0015799.1 3 80 +;locus=RLOC_00009216
Chr1	stalkie_big_nohaplotig	exon	84140169	84140333	100	-	.	Parent=FBgn0015799.1.mrna1;Target=FBgn0015799.1 2050 2214 +
Chr1	stalkie_big_nohaplotig	exon	84140400	84140558	100	-	.	Parent=FBgn0015799.1.mrna1;Target=FBgn0015799.1 1891 2049 +
Chr1	stalkie_big_nohaplotig	exon	84140614	84140705	100	-	.	Parent=FBgn0015799.1.mrna1;Target=FBgn0015799.1 1799 1890 +
Chr1	stalkie_big_nohaplotig	exon	84140842	84140947	100	-	.	Parent=FBgn0015799.1.mrna1;Target=FBgn0015799.1 1693 1798 +
Chr1	stalkie_big_nohaplotig	exon	84141006	84141185	100	-	.	Parent=FBgn0015799.1.mrna1;Target=FBgn0015799.1 1513 1692 +
Chr1	stalkie_big_nohaplotig	exon	84141240	84141331	100	-	.	Parent=FBgn0015799.1.mrna1;Target=FBgn0015799.1 1421 1512 +
Chr1	stalkie_big_nohaplotig	exon	84141387	84141476	100	-	.	Parent=FBgn0015799.1.mrna1;Target=FBgn0015799.1 1331 1420 +
Chr1	stalkie_big_nohaplotig	exon	84141532	84142064	100	-	.	Parent=FBgn0015799.1.mrna1;Target=FBgn0015799.1 798 1330 +
Chr1	stalkie_big_nohaplotig	exon	84142162	84142313	100	-	.	Parent=FBgn0015799.1.mrna1;Target=FBgn0015799.1 646 797 +
Chr1	stalkie_big_nohaplotig	exon	84142362	84142393	100	-	.	Parent=FBgn0015799.1.mrna1;Target=FBgn0015799.1 614 645 +
Chr1	stalkie_big_nohaplotig	exon	84142451	84142619	100	-	.	Parent=FBgn0015799.1.mrna1;Target=FBgn0015799.1 445 613 +
Chr1	stalkie_big_nohaplotig	exon	84142691	84143048	100	-	.	Parent=FBgn0015799.1.mrna1;Target=FBgn0015799.1 87 444 +
Chr1	stalkie_big_nohaplotig	exon	84143132	84143216	98	-	.	Parent=FBgn0015799.1.mrna1;Target=FBgn0015799.1 1 86 +
Chr1	stalkie_big_nohaplotig	CDS	84143138	84143214	.	-	0	Parent=FBgn0015799.1.mrna1
Chr1	gffcl	locus	84228322	84229514	.	+	.	ID=RLOC_00009218;geneIDs=FBgn0066303.1.path1,FBgn0066304.1.path1;transcripts=FBgn0066304.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84228322	84229102	.	+	.	ID=FBgn0066304.1.mrna1;geneID=FBgn0066304.1.path1;Name=FBgn0066304.1;Dir=sensecoverage=100.0;identity=100.0;matches=465;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009218
Chr1	stalkie_big_nohaplotig	exon	84228322	84228519	100	+	.	Parent=FBgn0066304.1.mrna1;Target=FBgn0066304.1 1 198 +
Chr1	stalkie_big_nohaplotig	exon	84228780	84228945	100	+	.	Parent=FBgn0066304.1.mrna1;Target=FBgn0066304.1 199 364 +
Chr1	stalkie_big_nohaplotig	exon	84229002	84229102	100	+	.	Parent=FBgn0066304.1.mrna1;Target=FBgn0066304.1 365 465 +
Chr1	stalkie_big_nohaplotig	CDS	84228322	84228519	.	+	0	Parent=FBgn0066304.1.mrna1;Target=FBgn0066304.1 1 198 +
Chr1	stalkie_big_nohaplotig	CDS	84228780	84228945	.	+	0	Parent=FBgn0066304.1.mrna1;Target=FBgn0066304.1 199 364 +
Chr1	stalkie_big_nohaplotig	CDS	84229002	84229102	.	+	2	Parent=FBgn0066304.1.mrna1;Target=FBgn0066304.1 365 465 +
Chr1	gffcl	locus	84229594	84241562	.	-	.	ID=RLOC_00009219;geneIDs=FBgn0024804.1.path1,comp113027_c0_seq1.path1;transcripts=FBgn0024804.1.mrna1,comp113027_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84229594	84241562	.	-	.	ID=FBgn0024804.1.mrna1;geneID=FBgn0024804.1.path1;Name=FBgn0024804.1;Dir=sensecoverage=100.0;identity=99.9;matches=1457;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009219
Chr1	stalkie_big_nohaplotig	exon	84229594	84229730	100	-	.	Parent=FBgn0024804.1.mrna1;Target=FBgn0024804.1 1322 1458 +
Chr1	stalkie_big_nohaplotig	exon	84231833	84231946	100	-	.	Parent=FBgn0024804.1.mrna1;Target=FBgn0024804.1 1208 1321 +
Chr1	stalkie_big_nohaplotig	exon	84232016	84232178	100	-	.	Parent=FBgn0024804.1.mrna1;Target=FBgn0024804.1 1045 1207 +
Chr1	stalkie_big_nohaplotig	exon	84232238	84232373	100	-	.	Parent=FBgn0024804.1.mrna1;Target=FBgn0024804.1 909 1044 +
Chr1	stalkie_big_nohaplotig	exon	84232920	84233021	100	-	.	Parent=FBgn0024804.1.mrna1;Target=FBgn0024804.1 807 908 +
Chr1	stalkie_big_nohaplotig	exon	84233074	84233251	100	-	.	Parent=FBgn0024804.1.mrna1;Target=FBgn0024804.1 629 806 +
Chr1	stalkie_big_nohaplotig	exon	84233304	84233418	100	-	.	Parent=FBgn0024804.1.mrna1;Target=FBgn0024804.1 514 628 +
Chr1	stalkie_big_nohaplotig	exon	84233528	84233723	99	-	.	Parent=FBgn0024804.1.mrna1;Target=FBgn0024804.1 318 513 +
Chr1	stalkie_big_nohaplotig	exon	84233794	84233925	100	-	.	Parent=FBgn0024804.1.mrna1;Target=FBgn0024804.1 186 317 +
Chr1	stalkie_big_nohaplotig	exon	84241323	84241393	100	-	.	Parent=FBgn0024804.1.mrna1;Target=FBgn0024804.1 115 185 +
Chr1	stalkie_big_nohaplotig	exon	84241449	84241562	100	-	.	Parent=FBgn0024804.1.mrna1;Target=FBgn0024804.1 1 114 +
Chr1	stalkie_big_nohaplotig	CDS	84229594	84229730	.	-	2	Parent=FBgn0024804.1.mrna1;Target=FBgn0024804.1 1322 1458 +
Chr1	stalkie_big_nohaplotig	CDS	84231833	84231946	.	-	2	Parent=FBgn0024804.1.mrna1;Target=FBgn0024804.1 1208 1321 +
Chr1	stalkie_big_nohaplotig	CDS	84232016	84232178	.	-	0	Parent=FBgn0024804.1.mrna1;Target=FBgn0024804.1 1045 1207 +
Chr1	stalkie_big_nohaplotig	CDS	84232238	84232373	.	-	1	Parent=FBgn0024804.1.mrna1;Target=FBgn0024804.1 909 1044 +
Chr1	stalkie_big_nohaplotig	CDS	84232920	84233021	.	-	1	Parent=FBgn0024804.1.mrna1;Target=FBgn0024804.1 807 908 +
Chr1	stalkie_big_nohaplotig	CDS	84233074	84233251	.	-	2	Parent=FBgn0024804.1.mrna1;Target=FBgn0024804.1 629 806 +
Chr1	stalkie_big_nohaplotig	CDS	84233304	84233418	.	-	0	Parent=FBgn0024804.1.mrna1;Target=FBgn0024804.1 514 628 +
Chr1	stalkie_big_nohaplotig	CDS	84233528	84233723	.	-	1	Parent=FBgn0024804.1.mrna1;Target=FBgn0024804.1 318 513 +
Chr1	stalkie_big_nohaplotig	CDS	84233794	84233925	.	-	1	Parent=FBgn0024804.1.mrna1;Target=FBgn0024804.1 186 317 +
Chr1	stalkie_big_nohaplotig	CDS	84241323	84241393	.	-	0	Parent=FBgn0024804.1.mrna1;Target=FBgn0024804.1 115 185 +
Chr1	stalkie_big_nohaplotig	CDS	84241449	84241562	.	-	0	Parent=FBgn0024804.1.mrna1;Target=FBgn0024804.1 1 114 +
Chr1	stalkie_big_nohaplotig	mRNA	84229708	84230368	.	-	.	ID=comp113027_c0_seq1.mrna1;geneID=comp113027_c0_seq1.path1;Name=comp113027_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.8;matches=661;mismatches=0;indels=1;unknowns=0;Target=comp113027_c0_seq1 666 5 .;CDS_Target=comp113027_c0_seq1 135 7 .;locus=RLOC_00009219
Chr1	stalkie_big_nohaplotig	exon	84229708	84230368	99	-	.	Parent=comp113027_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	84230238	84230366	.	-	0	Parent=comp113027_c0_seq1.mrna1
Chr1	gffcl	locus	84322747	84324687	.	-	.	ID=RLOC_00009222;geneIDs=comp163611_c0_seq1.path4;transcripts=comp163611_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	84322747	84324687	.	-	.	ID=comp163611_c0_seq1.mrna4;geneID=comp163611_c0_seq1.path4;Name=comp163611_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1933;mismatches=8;indels=0;unknowns=0;Target=comp163611_c0_seq1 1941 1 .;CDS_Target=comp163611_c0_seq1 1941 478 .;locus=RLOC_00009222
Chr1	stalkie_big_nohaplotig	exon	84322747	84324687	99	-	.	Parent=comp163611_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	84322747	84324210	.	-	0	Parent=comp163611_c0_seq1.mrna4
Chr1	gffcl	locus	84358441	84358935	.	+	.	ID=RLOC_00009224;geneIDs=comp150063_c0_seq1.path2;transcripts=comp150063_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	84358441	84358935	.	+	.	ID=comp150063_c0_seq1.mrna2;geneID=comp150063_c0_seq1.path2;Name=comp150063_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.2;matches=491;mismatches=4;indels=0;unknowns=0;Target=comp150063_c0_seq1 496 2 .;CDS_Target=comp150063_c0_seq1 393 235 .;locus=RLOC_00009224
Chr1	stalkie_big_nohaplotig	exon	84358441	84358935	99	+	.	Parent=comp150063_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	84358674	84358832	.	+	0	Parent=comp150063_c0_seq1.mrna2
Chr1	gffcl	locus	84359435	84360563	.	-	.	ID=RLOC_00009225;geneIDs=comp161038_c1_seq1.path2;transcripts=comp161038_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	84359435	84360563	.	-	.	ID=comp161038_c1_seq1.mrna2;geneID=comp161038_c1_seq1.path2;Name=comp161038_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=481;mismatches=0;indels=2;unknowns=0;Target=comp161038_c1_seq1 124 2 .;locus=RLOC_00009225
Chr1	stalkie_big_nohaplotig	exon	84359435	84359462	100	-	.	Parent=comp161038_c1_seq1.mrna2;Target=comp161038_c1_seq1 481 454 .
Chr1	stalkie_big_nohaplotig	exon	84360109	84360563	99	-	.	Parent=comp161038_c1_seq1.mrna2;Target=comp161038_c1_seq1 453 1 .
Chr1	stalkie_big_nohaplotig	CDS	84360440	84360562	.	-	0	Parent=comp161038_c1_seq1.mrna2
Chr1	gffcl	locus	84376837	84380206	.	-	.	ID=RLOC_00009228;geneIDs=comp155751_c0_seq1.path1;transcripts=comp155751_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84376837	84380206	.	-	.	ID=comp155751_c0_seq1.mrna1;geneID=comp155751_c0_seq1.path1;Name=comp155751_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1294;mismatches=9;indels=0;unknowns=0;Target=comp155751_c0_seq1 1279 854 .;locus=RLOC_00009228
Chr1	stalkie_big_nohaplotig	exon	84376837	84377291	99	-	.	Parent=comp155751_c0_seq1.mrna1;Target=comp155751_c0_seq1 1303 849 .
Chr1	stalkie_big_nohaplotig	exon	84379359	84380206	99	-	.	Parent=comp155751_c0_seq1.mrna1;Target=comp155751_c0_seq1 848 1 .
Chr1	stalkie_big_nohaplotig	CDS	84376861	84377286	.	-	0	Parent=comp155751_c0_seq1.mrna1
Chr1	gffcl	locus	84390742	84391350	.	+	.	ID=RLOC_00009229;geneIDs=comp161649_c2_seq1.path2;transcripts=comp161649_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	84390742	84391350	.	+	.	ID=comp161649_c2_seq1.mrna2;geneID=comp161649_c2_seq1.path2;Name=comp161649_c2_seq1;Dir=indeterminatecoverage=99.8;identity=99.2;matches=604;mismatches=5;indels=0;unknowns=0;Target=comp161649_c2_seq1 609 1 .;CDS_Target=comp161649_c2_seq1 340 2 .;locus=RLOC_00009229
Chr1	stalkie_big_nohaplotig	exon	84390742	84391350	99	+	.	Parent=comp161649_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	84390743	84391081	.	+	0	Parent=comp161649_c2_seq1.mrna2
Chr1	gffcl	locus	84408442	84409052	.	-	.	ID=RLOC_00009230;geneIDs=FBgn0026084.1.path1;transcripts=FBgn0026084.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84408442	84409052	.	-	.	ID=FBgn0026084.1.mrna1;geneID=FBgn0026084.1.path1;Name=FBgn0026084.1;Dir=sensecoverage=97.9;identity=98.8;matches=418;mismatches=3;indels=2;unknowns=0;locus=RLOC_00009230
Chr1	stalkie_big_nohaplotig	exon	84408442	84408578	100	-	.	Parent=FBgn0026084.1.mrna1;Target=FBgn0026084.1 296 432 +
Chr1	stalkie_big_nohaplotig	exon	84408712	84408825	99	-	.	Parent=FBgn0026084.1.mrna1;Target=FBgn0026084.1 182 295 +
Chr1	stalkie_big_nohaplotig	exon	84408883	84409052	97	-	.	Parent=FBgn0026084.1.mrna1;Target=FBgn0026084.1 10 181 +
Chr1	stalkie_big_nohaplotig	CDS	84408442	84408578	.	-	2	Parent=FBgn0026084.1.mrna1;Target=FBgn0026084.1 296 432 +
Chr1	stalkie_big_nohaplotig	CDS	84408712	84408825	.	-	2	Parent=FBgn0026084.1.mrna1;Target=FBgn0026084.1 182 295 +
Chr1	stalkie_big_nohaplotig	CDS	84408883	84409012	.	-	0	Parent=FBgn0026084.1.mrna1;Target=FBgn0026084.1 52 181 +
Chr1	gffcl	locus	84409132	84409610	.	-	.	ID=RLOC_00009231;geneIDs=comp153226_c0_seq1.path1;transcripts=comp153226_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84409132	84409610	.	-	.	ID=comp153226_c0_seq1.mrna1;geneID=comp153226_c0_seq1.path1;Name=comp153226_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=475;mismatches=4;indels=3;unknowns=0;Target=comp153226_c0_seq1 482 1 .;CDS_Target=comp153226_c0_seq1 72 22 .;locus=RLOC_00009231
Chr1	stalkie_big_nohaplotig	exon	84409132	84409610	98	-	.	Parent=comp153226_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	84409539	84409589	.	-	0	Parent=comp153226_c0_seq1.mrna1
Chr1	gffcl	locus	84452430	84452908	.	+	.	ID=RLOC_00009234;geneIDs=comp153226_c0_seq1.path2;transcripts=comp153226_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	84452430	84452908	.	+	.	ID=comp153226_c0_seq1.mrna2;geneID=comp153226_c0_seq1.path2;Name=comp153226_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=475;mismatches=4;indels=3;unknowns=0;Target=comp153226_c0_seq1 482 1 .;CDS_Target=comp153226_c0_seq1 72 22 .;locus=RLOC_00009234
Chr1	stalkie_big_nohaplotig	exon	84452430	84452908	98	+	.	Parent=comp153226_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	84452451	84452501	.	+	0	Parent=comp153226_c0_seq1.mrna2
Chr1	gffcl	locus	84452988	84453598	.	+	.	ID=RLOC_00009235;geneIDs=FBgn0026084.1.path2;transcripts=FBgn0026084.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	84452988	84453598	.	+	.	ID=FBgn0026084.1.mrna2;geneID=FBgn0026084.1.path2;Name=FBgn0026084.1;Dir=sensecoverage=97.9;identity=98.8;matches=418;mismatches=3;indels=2;unknowns=0;locus=RLOC_00009235
Chr1	stalkie_big_nohaplotig	exon	84452988	84453157	97	+	.	Parent=FBgn0026084.1.mrna2;Target=FBgn0026084.1 10 181 +
Chr1	stalkie_big_nohaplotig	exon	84453215	84453328	99	+	.	Parent=FBgn0026084.1.mrna2;Target=FBgn0026084.1 182 295 +
Chr1	stalkie_big_nohaplotig	exon	84453462	84453598	100	+	.	Parent=FBgn0026084.1.mrna2;Target=FBgn0026084.1 296 432 +
Chr1	stalkie_big_nohaplotig	CDS	84453028	84453157	.	+	0	Parent=FBgn0026084.1.mrna2;Target=FBgn0026084.1 52 181 +
Chr1	stalkie_big_nohaplotig	CDS	84453215	84453328	.	+	2	Parent=FBgn0026084.1.mrna2;Target=FBgn0026084.1 182 295 +
Chr1	stalkie_big_nohaplotig	CDS	84453462	84453598	.	+	2	Parent=FBgn0026084.1.mrna2;Target=FBgn0026084.1 296 432 +
Chr1	gffcl	locus	84454570	84456240	.	.	.	ID=RLOC_00009236;geneIDs=FBgn0003514.1.path1,comp93873_c0_seq1.path1,comp134275_c0_seq1.path1;transcripts=FBgn0003514.1.mrna1,comp93873_c0_seq1.mrna1,comp134275_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84454570	84455529	.	-	.	ID=FBgn0003514.1.mrna1;geneID=FBgn0003514.1.path1;Name=FBgn0003514.1;Dir=sensecoverage=100.0;identity=100.0;matches=561;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009236
Chr1	stalkie_big_nohaplotig	exon	84454570	84454671	100	-	.	Parent=FBgn0003514.1.mrna1;Target=FBgn0003514.1 460 561 +
Chr1	stalkie_big_nohaplotig	exon	84454727	84455149	100	-	.	Parent=FBgn0003514.1.mrna1;Target=FBgn0003514.1 37 459 +
Chr1	stalkie_big_nohaplotig	exon	84455494	84455529	100	-	.	Parent=FBgn0003514.1.mrna1;Target=FBgn0003514.1 1 36 +
Chr1	stalkie_big_nohaplotig	CDS	84454570	84454671	.	-	0	Parent=FBgn0003514.1.mrna1;Target=FBgn0003514.1 460 561 +
Chr1	stalkie_big_nohaplotig	CDS	84454727	84455149	.	-	0	Parent=FBgn0003514.1.mrna1;Target=FBgn0003514.1 37 459 +
Chr1	stalkie_big_nohaplotig	CDS	84455494	84455529	.	-	0	Parent=FBgn0003514.1.mrna1;Target=FBgn0003514.1 1 36 +
Chr1	stalkie_big_nohaplotig	mRNA	84455080	84456240	.	-	.	ID=comp93873_c0_seq1.mrna1;geneID=comp93873_c0_seq1.path1;Name=comp93873_c0_seq1;Dir=antisensecoverage=100.0;identity=99.2;matches=238;mismatches=2;indels=0;unknowns=0;Target=comp93873_c0_seq1 2 67 .;locus=RLOC_00009236
Chr1	stalkie_big_nohaplotig	exon	84455080	84455149	97	-	.	Parent=comp93873_c0_seq1.mrna1;Target=comp93873_c0_seq1 1 70 -
Chr1	stalkie_big_nohaplotig	exon	84456071	84456240	100	-	.	Parent=comp93873_c0_seq1.mrna1;Target=comp93873_c0_seq1 71 240 -
Chr1	stalkie_big_nohaplotig	CDS	84455081	84455146	.	-	0	Parent=comp93873_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84455126	84455517	.	+	.	ID=comp134275_c0_seq1.mrna1;geneID=comp134275_c0_seq1.path1;Name=comp134275_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=392;mismatches=0;indels=3;unknowns=0;Target=comp134275_c0_seq1 395 1 .;CDS_Target=comp134275_c0_seq1 61 2 .;locus=RLOC_00009236
Chr1	stalkie_big_nohaplotig	exon	84455126	84455517	99	+	.	Parent=comp134275_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	84455127	84455186	.	+	0	Parent=comp134275_c0_seq1.mrna1
Chr1	gffcl	locus	84522446	84527264	.	+	.	ID=RLOC_00009240;geneIDs=FBgn0030870.1.path2;transcripts=FBgn0030870.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	84522446	84527264	.	+	.	ID=FBgn0030870.1.mrna2;geneID=FBgn0030870.1.path2;Name=FBgn0030870.1;Dir=sensecoverage=85.2;identity=99.6;matches=741;mismatches=3;indels=0;unknowns=0;locus=RLOC_00009240
Chr1	stalkie_big_nohaplotig	exon	84522446	84522575	99	+	.	Parent=FBgn0030870.1.mrna2;Target=FBgn0030870.1 130 259 +
Chr1	stalkie_big_nohaplotig	exon	84522924	84523065	100	+	.	Parent=FBgn0030870.1.mrna2;Target=FBgn0030870.1 260 401 +
Chr1	stalkie_big_nohaplotig	exon	84523119	84523317	99	+	.	Parent=FBgn0030870.1.mrna2;Target=FBgn0030870.1 402 600 +
Chr1	stalkie_big_nohaplotig	exon	84523393	84523558	100	+	.	Parent=FBgn0030870.1.mrna2;Target=FBgn0030870.1 601 766 +
Chr1	stalkie_big_nohaplotig	exon	84527158	84527264	99	+	.	Parent=FBgn0030870.1.mrna2;Target=FBgn0030870.1 767 873 +
Chr1	stalkie_big_nohaplotig	CDS	84522446	84522575	.	+	0	Parent=FBgn0030870.1.mrna2;Target=FBgn0030870.1 130 259 +
Chr1	stalkie_big_nohaplotig	CDS	84522924	84523065	.	+	2	Parent=FBgn0030870.1.mrna2;Target=FBgn0030870.1 260 401 +
Chr1	stalkie_big_nohaplotig	CDS	84523119	84523317	.	+	1	Parent=FBgn0030870.1.mrna2;Target=FBgn0030870.1 402 600 +
Chr1	stalkie_big_nohaplotig	CDS	84523393	84523558	.	+	0	Parent=FBgn0030870.1.mrna2;Target=FBgn0030870.1 601 766 +
Chr1	stalkie_big_nohaplotig	CDS	84527158	84527264	.	+	2	Parent=FBgn0030870.1.mrna2;Target=FBgn0030870.1 767 873 +
Chr1	gffcl	locus	84525237	84525731	.	-	.	ID=RLOC_00009241;geneIDs=comp148379_c0_seq1.path1;transcripts=comp148379_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84525237	84525731	.	-	.	ID=comp148379_c0_seq1.mrna1;geneID=comp148379_c0_seq1.path1;Name=comp148379_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=488;mismatches=7;indels=0;unknowns=0;Target=comp148379_c0_seq1 495 1 .;CDS_Target=comp148379_c0_seq1 177 1 .;locus=RLOC_00009241
Chr1	stalkie_big_nohaplotig	exon	84525237	84525731	98	-	.	Parent=comp148379_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	84525555	84525731	.	-	0	Parent=comp148379_c0_seq1.mrna1
Chr1	gffcl	locus	84526357	84526701	.	-	.	ID=RLOC_00009242;geneIDs=comp140464_c0_seq1.path1;transcripts=comp140464_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84526357	84526701	.	-	.	ID=comp140464_c0_seq1.mrna1;geneID=comp140464_c0_seq1.path1;Name=comp140464_c0_seq1;Dir=indeterminatecoverage=93.8;identity=98.8;matches=342;mismatches=3;indels=1;unknowns=0;Target=comp140464_c0_seq1 346 1 .;CDS_Target=comp140464_c0_seq1 345 178 .;locus=RLOC_00009242
Chr1	stalkie_big_nohaplotig	exon	84526357	84526701	98	-	.	Parent=comp140464_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	84526358	84526525	.	-	0	Parent=comp140464_c0_seq1.mrna1
Chr1	gffcl	locus	84527687	84527960	.	-	.	ID=RLOC_00009243;geneIDs=comp404946_c0_seq1.path1;transcripts=comp404946_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84527687	84527960	.	-	.	ID=comp404946_c0_seq1.mrna1;geneID=comp404946_c0_seq1.path1;Name=comp404946_c0_seq1;Dir=indeterminatecoverage=79.2;identity=99.6;matches=273;mismatches=1;indels=0;unknowns=0;Target=comp404946_c0_seq1 275 2 .;CDS_Target=comp404946_c0_seq1 42 4 .;locus=RLOC_00009243
Chr1	stalkie_big_nohaplotig	exon	84527687	84527960	99	-	.	Parent=comp404946_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	84527920	84527958	.	-	0	Parent=comp404946_c0_seq1.mrna1
Chr1	gffcl	locus	84613011	84614353	.	+	.	ID=RLOC_00009245;geneIDs=FBgn0030391.1.path1;transcripts=FBgn0030391.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84613011	84614353	.	+	.	ID=FBgn0030391.1.mrna1;geneID=FBgn0030391.1.path1;Name=FBgn0030391.1;Dir=sensecoverage=100.0;identity=99.8;matches=808;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009245
Chr1	stalkie_big_nohaplotig	exon	84613011	84613064	100	+	.	Parent=FBgn0030391.1.mrna1;Target=FBgn0030391.1 1 54 +
Chr1	stalkie_big_nohaplotig	exon	84613424	84613550	100	+	.	Parent=FBgn0030391.1.mrna1;Target=FBgn0030391.1 55 181 +
Chr1	stalkie_big_nohaplotig	exon	84613598	84613791	99	+	.	Parent=FBgn0030391.1.mrna1;Target=FBgn0030391.1 182 375 +
Chr1	stalkie_big_nohaplotig	exon	84613853	84614075	99	+	.	Parent=FBgn0030391.1.mrna1;Target=FBgn0030391.1 376 598 +
Chr1	stalkie_big_nohaplotig	exon	84614142	84614353	100	+	.	Parent=FBgn0030391.1.mrna1;Target=FBgn0030391.1 599 810 +
Chr1	stalkie_big_nohaplotig	CDS	84613011	84613064	.	+	0	Parent=FBgn0030391.1.mrna1;Target=FBgn0030391.1 1 54 +
Chr1	stalkie_big_nohaplotig	CDS	84613424	84613550	.	+	0	Parent=FBgn0030391.1.mrna1;Target=FBgn0030391.1 55 181 +
Chr1	stalkie_big_nohaplotig	CDS	84613598	84613791	.	+	2	Parent=FBgn0030391.1.mrna1;Target=FBgn0030391.1 182 375 +
Chr1	stalkie_big_nohaplotig	CDS	84613853	84614075	.	+	0	Parent=FBgn0030391.1.mrna1;Target=FBgn0030391.1 376 598 +
Chr1	stalkie_big_nohaplotig	CDS	84614142	84614353	.	+	2	Parent=FBgn0030391.1.mrna1;Target=FBgn0030391.1 599 810 +
Chr1	gffcl	locus	84719586	84719714	.	-	.	ID=RLOC_00009248;geneIDs=FBgn0030870.1.path1;transcripts=FBgn0030870.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84719586	84719714	.	-	.	ID=FBgn0030870.1.mrna1;geneID=FBgn0030870.1.path1;Name=FBgn0030870.1;Dir=indeterminatecoverage=14.8;identity=100.0;matches=129;mismatches=0;indels=0;unknowns=0;Target=FBgn0030870.1 129 1 .;locus=RLOC_00009248
Chr1	stalkie_big_nohaplotig	exon	84719586	84719714	100	-	.	Parent=FBgn0030870.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	84719586	84719714	.	-	0	Parent=FBgn0030870.1.mrna1
Chr1	gffcl	locus	84819220	84819930	.	+	.	ID=RLOC_00009250;geneIDs=Dp_FBgn0250603.path2;transcripts=Dp_FBgn0250603.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	84819220	84819930	.	+	.	ID=Dp_FBgn0250603.mrna2;geneID=Dp_FBgn0250603.path2;Name=Dp_FBgn0250603;Dir=indeterminatecoverage=100.0;identity=98.7;matches=702;mismatches=9;indels=0;unknowns=0;Target=Dp_FBgn0250603 711 1 .;locus=RLOC_00009250
Chr1	stalkie_big_nohaplotig	exon	84819220	84819930	98	+	.	Parent=Dp_FBgn0250603.mrna2
Chr1	stalkie_big_nohaplotig	CDS	84819220	84819930	.	+	0	Parent=Dp_FBgn0250603.mrna2
Chr1	gffcl	locus	84824515	84825269	.	-	.	ID=RLOC_00009251;geneIDs=comp157310_c1_seq1.path1;transcripts=comp157310_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84824515	84825269	.	-	.	ID=comp157310_c1_seq1.mrna1;geneID=comp157310_c1_seq1.path1;Name=comp157310_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=736;mismatches=15;indels=6;unknowns=0;Target=comp157310_c1_seq1 753 1 .;CDS_Target=comp157310_c1_seq1 38 3 .;locus=RLOC_00009251
Chr1	stalkie_big_nohaplotig	exon	84824515	84825269	97	-	.	Parent=comp157310_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	84825231	84825267	.	-	0	Parent=comp157310_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84875388	85610747	.	+	.	ID=comp163630_c5_seq1.mrna1;geneID=comp163630_c5_seq1.path1;Name=comp163630_c5_seq1;Dir=antisensecoverage=68.9;identity=95.4;matches=2744;mismatches=87;indels=46;unknowns=0;locus=RLOC_00009252
Chr1	stalkie_big_nohaplotig	exon	84875388	84876209	94	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 3224 4052 -
Chr1	stalkie_big_nohaplotig	exon	84883363	84883373	90	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 3213 3223 -
Chr1	stalkie_big_nohaplotig	exon	84886812	84886819	100	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 3205 3212 -
Chr1	stalkie_big_nohaplotig	exon	85451342	85451404	49	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 3146 3201 -
Chr1	stalkie_big_nohaplotig	exon	85451961	85451970	100	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 3125 3134 -
Chr1	stalkie_big_nohaplotig	exon	85491541	85491550	80	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 3115 3124 -
Chr1	stalkie_big_nohaplotig	exon	85492051	85492057	85	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 3108 3114 -
Chr1	stalkie_big_nohaplotig	exon	85496677	85496685	100	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 3099 3107 -
Chr1	stalkie_big_nohaplotig	exon	85502644	85502665	63	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 3078 3098 -
Chr1	stalkie_big_nohaplotig	exon	85504432	85504440	100	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 3069 3077 -
Chr1	stalkie_big_nohaplotig	exon	85508762	85510474	99	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1352 3068 -
Chr1	stalkie_big_nohaplotig	exon	85513487	85513500	92	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1338 1351 -
Chr1	stalkie_big_nohaplotig	exon	85514632	85514638	100	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1331 1337 -
Chr1	stalkie_big_nohaplotig	exon	85518597	85518604	100	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1323 1330 -
Chr1	stalkie_big_nohaplotig	exon	85526415	85526421	100	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1316 1322 -
Chr1	stalkie_big_nohaplotig	exon	85528780	85528781	100	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1314 1315 -
Chr1	stalkie_big_nohaplotig	exon	85535625	85535633	100	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1284 1292 -
Chr1	stalkie_big_nohaplotig	exon	85540576	85540597	40	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1252 1283 -
Chr1	stalkie_big_nohaplotig	exon	85552152	85552169	72	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1234 1251 -
Chr1	stalkie_big_nohaplotig	exon	85557332	85557342	100	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1223 1233 -
Chr1	stalkie_big_nohaplotig	exon	85557878	85557886	88	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1214 1222 -
Chr1	stalkie_big_nohaplotig	exon	85560296	85560300	100	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1209 1213 -
Chr1	stalkie_big_nohaplotig	exon	85566343	85566349	100	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1202 1208 -
Chr1	stalkie_big_nohaplotig	exon	85581825	85581833	100	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1193 1201 -
Chr1	stalkie_big_nohaplotig	exon	85595754	85595764	45	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1173 1192 -
Chr1	stalkie_big_nohaplotig	exon	85598078	85598086	100	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1161 1169 -
Chr1	stalkie_big_nohaplotig	exon	85608368	85608373	100	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1124 1129 -
Chr1	stalkie_big_nohaplotig	exon	85610745	85610747	100	+	.	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1121 1123 -
Chr1	stalkie_big_nohaplotig	CDS	85509591	85510474	.	+	0	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1352 2235 .
Chr1	stalkie_big_nohaplotig	CDS	85513487	85513500	.	+	1	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1338 1351 .
Chr1	stalkie_big_nohaplotig	CDS	85514632	85514638	.	+	2	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1331 1337 .
Chr1	stalkie_big_nohaplotig	CDS	85518597	85518604	.	+	1	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1323 1330 .
Chr1	stalkie_big_nohaplotig	CDS	85526415	85526421	.	+	2	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1316 1322 .
Chr1	stalkie_big_nohaplotig	CDS	85528780	85528781	.	+	1	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1314 1315 .
Chr1	stalkie_big_nohaplotig	CDS	85535625	85535633	.	+	2	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1284 1292 .
Chr1	stalkie_big_nohaplotig	CDS	85540576	85540597	.	+	2	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1252 1283 .
Chr1	stalkie_big_nohaplotig	CDS	85552152	85552169	.	+	1	Parent=comp163630_c5_seq1.mrna1;Target=comp163630_c5_seq1 1234 1251 .
Chr1	gffcl	locus	84882953	85079982	.	-	.	ID=RLOC_00009254;geneIDs=FBgn0259143.1.path1,comp150570_c0_seq1.path1;transcripts=comp150570_c0_seq1.mrna1,FBgn0259143.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84882953	84918448	.	-	.	ID=comp150570_c0_seq1.mrna1;geneID=comp150570_c0_seq1.path1;Name=comp150570_c0_seq1;Dir=antisensecoverage=99.4;identity=99.9;matches=1949;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009254
Chr1	stalkie_big_nohaplotig	exon	84882953	84883474	99	-	.	Parent=comp150570_c0_seq1.mrna1;Target=comp150570_c0_seq1 1 522 -
Chr1	stalkie_big_nohaplotig	exon	84884576	84884685	100	-	.	Parent=comp150570_c0_seq1.mrna1;Target=comp150570_c0_seq1 523 632 -
Chr1	stalkie_big_nohaplotig	exon	84884746	84884828	100	-	.	Parent=comp150570_c0_seq1.mrna1;Target=comp150570_c0_seq1 633 715 -
Chr1	stalkie_big_nohaplotig	exon	84884883	84885062	100	-	.	Parent=comp150570_c0_seq1.mrna1;Target=comp150570_c0_seq1 716 895 -
Chr1	stalkie_big_nohaplotig	exon	84917393	84918448	99	-	.	Parent=comp150570_c0_seq1.mrna1;Target=comp150570_c0_seq1 896 1951 -
Chr1	stalkie_big_nohaplotig	CDS	84883280	84883474	.	-	0	Parent=comp150570_c0_seq1.mrna1;Target=comp150570_c0_seq1 328 522 .
Chr1	stalkie_big_nohaplotig	CDS	84884576	84884685	.	-	2	Parent=comp150570_c0_seq1.mrna1;Target=comp150570_c0_seq1 523 632 .
Chr1	stalkie_big_nohaplotig	CDS	84884746	84884828	.	-	1	Parent=comp150570_c0_seq1.mrna1;Target=comp150570_c0_seq1 633 715 .
Chr1	stalkie_big_nohaplotig	CDS	84884883	84884926	.	-	0	Parent=comp150570_c0_seq1.mrna1;Target=comp150570_c0_seq1 716 759 .
Chr1	stalkie_big_nohaplotig	mRNA	84883283	85079982	.	-	.	ID=FBgn0259143.1.mrna1;geneID=FBgn0259143.1.path1;Name=FBgn0259143.1;Dir=sensecoverage=100.0;identity=99.8;matches=1081;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009254
Chr1	stalkie_big_nohaplotig	exon	84883283	84883474	99	-	.	Parent=FBgn0259143.1.mrna1;Target=FBgn0259143.1 892 1083 +
Chr1	stalkie_big_nohaplotig	exon	84884576	84884685	100	-	.	Parent=FBgn0259143.1.mrna1;Target=FBgn0259143.1 782 891 +
Chr1	stalkie_big_nohaplotig	exon	84884746	84884828	100	-	.	Parent=FBgn0259143.1.mrna1;Target=FBgn0259143.1 699 781 +
Chr1	stalkie_big_nohaplotig	exon	84884883	84885062	100	-	.	Parent=FBgn0259143.1.mrna1;Target=FBgn0259143.1 519 698 +
Chr1	stalkie_big_nohaplotig	exon	84994313	84994498	99	-	.	Parent=FBgn0259143.1.mrna1;Target=FBgn0259143.1 333 518 +
Chr1	stalkie_big_nohaplotig	exon	85079651	85079982	100	-	.	Parent=FBgn0259143.1.mrna1;Target=FBgn0259143.1 1 332 +
Chr1	stalkie_big_nohaplotig	CDS	84883283	84883474	.	-	0	Parent=FBgn0259143.1.mrna1;Target=FBgn0259143.1 892 1083 +
Chr1	stalkie_big_nohaplotig	CDS	84884576	84884685	.	-	2	Parent=FBgn0259143.1.mrna1;Target=FBgn0259143.1 782 891 +
Chr1	stalkie_big_nohaplotig	CDS	84884746	84884828	.	-	1	Parent=FBgn0259143.1.mrna1;Target=FBgn0259143.1 699 781 +
Chr1	stalkie_big_nohaplotig	CDS	84884883	84885062	.	-	1	Parent=FBgn0259143.1.mrna1;Target=FBgn0259143.1 519 698 +
Chr1	stalkie_big_nohaplotig	CDS	84994313	84994498	.	-	1	Parent=FBgn0259143.1.mrna1;Target=FBgn0259143.1 333 518 +
Chr1	stalkie_big_nohaplotig	CDS	85079651	85079982	.	-	0	Parent=FBgn0259143.1.mrna1;Target=FBgn0259143.1 1 332 +
Chr1	gffcl	locus	84885456	84886065	.	+	.	ID=RLOC_00009255;geneIDs=comp148563_c0_seq1.path1;transcripts=comp148563_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84885456	84886065	.	+	.	ID=comp148563_c0_seq1.mrna1;geneID=comp148563_c0_seq1.path1;Name=comp148563_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=606;mismatches=1;indels=0;unknowns=0;Target=comp148563_c0_seq1 332 282 .;locus=RLOC_00009255
Chr1	stalkie_big_nohaplotig	exon	84885456	84885542	100	+	.	Parent=comp148563_c0_seq1.mrna1;Target=comp148563_c0_seq1 87 1 .
Chr1	stalkie_big_nohaplotig	exon	84885546	84886065	99	+	.	Parent=comp148563_c0_seq1.mrna1;Target=comp148563_c0_seq1 657 138 .
Chr1	stalkie_big_nohaplotig	CDS	84885690	84885740	.	+	0	Parent=comp148563_c0_seq1.mrna1
Chr1	gffcl	locus	84886857	84887295	.	-	.	ID=RLOC_00009256;geneIDs=comp143115_c0_seq1.path1;transcripts=comp143115_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84886857	84887295	.	-	.	ID=comp143115_c0_seq1.mrna1;geneID=comp143115_c0_seq1.path1;Name=comp143115_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=438;mismatches=1;indels=1;unknowns=0;Target=comp143115_c0_seq1 440 1 .;CDS_Target=comp143115_c0_seq1 114 46 .;locus=RLOC_00009256
Chr1	stalkie_big_nohaplotig	exon	84886857	84887295	99	-	.	Parent=comp143115_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	84887182	84887250	.	-	0	Parent=comp143115_c0_seq1.mrna1
Chr1	gffcl	locus	84902783	84904646	.	+	.	ID=RLOC_00009261;geneIDs=comp156720_c2_seq1.path1;transcripts=comp156720_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84902783	84904646	.	+	.	ID=comp156720_c2_seq1.mrna1;geneID=comp156720_c2_seq1.path1;Name=comp156720_c2_seq1;Dir=indeterminatecoverage=97.8;identity=99.8;matches=1861;mismatches=3;indels=1;unknowns=0;Target=comp156720_c2_seq1 1907 43 .;CDS_Target=comp156720_c2_seq1 1669 1538 .;locus=RLOC_00009261
Chr1	stalkie_big_nohaplotig	exon	84902783	84904646	99	+	.	Parent=comp156720_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	84904277	84904408	.	+	0	Parent=comp156720_c2_seq1.mrna1
Chr1	gffcl	locus	84914868	84915390	.	+	.	ID=RLOC_00009262;geneIDs=comp146391_c0_seq1.path1;transcripts=comp146391_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84914868	84915390	.	+	.	ID=comp146391_c0_seq1.mrna1;geneID=comp146391_c0_seq1.path1;Name=comp146391_c0_seq1;Dir=indeterminatecoverage=100.0;identity=80.8;matches=426;mismatches=78;indels=23;unknowns=0;Target=comp146391_c0_seq1 508 1 .;CDS_Target=comp146391_c0_seq1 293 291 .;locus=RLOC_00009262
Chr1	stalkie_big_nohaplotig	exon	84914868	84915390	80	+	.	Parent=comp146391_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	84915173	84915175	.	+	0	Parent=comp146391_c0_seq1.mrna1
Chr1	gffcl	locus	84982154	86856496	.	+	.	ID=RLOC_00009264;geneIDs=comp139212_c1_seq1.path1;transcripts=comp139212_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84982154	86856496	.	+	.	ID=comp139212_c1_seq1.mrna1;geneID=comp139212_c1_seq1.path1;Name=comp139212_c1_seq1;Dir=antisensecoverage=88.7;identity=97.5;matches=546;mismatches=14;indels=0;unknowns=0;locus=RLOC_00009264
Chr1	stalkie_big_nohaplotig	exon	84982154	84982174	95	+	.	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 681 701 -
Chr1	stalkie_big_nohaplotig	exon	84991811	84991815	100	+	.	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 676 680 -
Chr1	stalkie_big_nohaplotig	exon	85054127	85054129	100	+	.	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 673 675 -
Chr1	stalkie_big_nohaplotig	exon	85059732	85059735	100	+	.	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 669 672 -
Chr1	stalkie_big_nohaplotig	exon	85065887	85065891	100	+	.	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 664 668 -
Chr1	stalkie_big_nohaplotig	exon	85076422	85076424	100	+	.	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 660 662 -
Chr1	stalkie_big_nohaplotig	exon	85078961	85078971	100	+	.	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 647 657 -
Chr1	stalkie_big_nohaplotig	exon	85094555	85094562	100	+	.	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 639 646 -
Chr1	stalkie_big_nohaplotig	exon	85097682	85097690	100	+	.	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 630 638 -
Chr1	stalkie_big_nohaplotig	exon	85103414	85103421	100	+	.	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 622 629 -
Chr1	stalkie_big_nohaplotig	exon	85113647	85113649	100	+	.	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 619 621 -
Chr1	stalkie_big_nohaplotig	exon	85125711	85125712	100	+	.	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 617 618 -
Chr1	stalkie_big_nohaplotig	exon	85129785	85129796	100	+	.	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 602 613 -
Chr1	stalkie_big_nohaplotig	exon	85176443	85176447	100	+	.	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 597 601 -
Chr1	stalkie_big_nohaplotig	exon	85182955	85182956	100	+	.	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 595 596 -
Chr1	stalkie_big_nohaplotig	exon	85186092	85186102	100	+	.	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 548 558 -
Chr1	stalkie_big_nohaplotig	exon	85187721	85187728	100	+	.	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 540 547 -
Chr1	stalkie_big_nohaplotig	exon	85197563	85197565	100	+	.	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 537 539 -
Chr1	stalkie_big_nohaplotig	exon	85199371	85199373	100	+	.	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 534 536 -
Chr1	stalkie_big_nohaplotig	exon	85199407	85199417	100	+	.	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 498 508 -
Chr1	stalkie_big_nohaplotig	exon	86856012	86856109	96	+	.	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 361 458 -
Chr1	stalkie_big_nohaplotig	exon	86856174	86856496	96	+	.	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 38 360 -
Chr1	stalkie_big_nohaplotig	CDS	86856108	86856109	.	+	0	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 361 362 .
Chr1	stalkie_big_nohaplotig	CDS	86856174	86856276	.	+	1	Parent=comp139212_c1_seq1.mrna1;Target=comp139212_c1_seq1 258 360 .
Chr1	gffcl	locus	84988518	86084301	.	+	.	ID=RLOC_00009265;geneIDs=comp160312_c1_seq1.path1;transcripts=comp160312_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	84988518	86084301	.	+	.	ID=comp160312_c1_seq1.mrna1;geneID=comp160312_c1_seq1.path1;Name=comp160312_c1_seq1;Dir=sensecoverage=99.9;identity=94.8;matches=1597;mismatches=54;indels=33;unknowns=0;Target=comp160312_c1_seq1 238 402 +;locus=RLOC_00009265
Chr1	stalkie_big_nohaplotig	exon	84988518	84989579	99	+	.	Parent=comp160312_c1_seq1.mrna1;Target=comp160312_c1_seq1 2 1063 +
Chr1	stalkie_big_nohaplotig	exon	85096371	85096376	100	+	.	Parent=comp160312_c1_seq1.mrna1;Target=comp160312_c1_seq1 1064 1069 +
Chr1	stalkie_big_nohaplotig	exon	86083635	86083846	80	+	.	Parent=comp160312_c1_seq1.mrna1;Target=comp160312_c1_seq1 1070 1252 +
Chr1	stalkie_big_nohaplotig	exon	86083901	86084301	90	+	.	Parent=comp160312_c1_seq1.mrna1;Target=comp160312_c1_seq1 1253 1655 +
Chr1	stalkie_big_nohaplotig	CDS	84988754	84988918	.	+	0	Parent=comp160312_c1_seq1.mrna1
Chr1	gffcl	locus	85131252	85131613	.	-	.	ID=RLOC_00009267;geneIDs=comp151573_c1_seq1.path7;transcripts=comp151573_c1_seq1.mrna7
Chr1	stalkie_big_nohaplotig	mRNA	85131252	85131613	.	-	.	ID=comp151573_c1_seq1.mrna7;geneID=comp151573_c1_seq1.path7;Name=comp151573_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=358;mismatches=4;indels=0;unknowns=0;Target=comp151573_c1_seq1 362 1 .;CDS_Target=comp151573_c1_seq1 120 1 .;locus=RLOC_00009267
Chr1	stalkie_big_nohaplotig	exon	85131252	85131613	98	-	.	Parent=comp151573_c1_seq1.mrna7
Chr1	stalkie_big_nohaplotig	CDS	85131494	85131613	.	-	0	Parent=comp151573_c1_seq1.mrna7
Chr1	gffcl	locus	85231451	85263736	.	-	.	ID=RLOC_00009268;geneIDs=comp162411_c2_seq1.path3;transcripts=comp162411_c2_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	85231451	85263736	.	-	.	ID=comp162411_c2_seq1.mrna3;geneID=comp162411_c2_seq1.path3;Name=comp162411_c2_seq1;Dir=indeterminatecoverage=99.5;identity=96.0;matches=1903;mismatches=54;indels=26;unknowns=0;Target=comp162411_c2_seq1 942 742 .;locus=RLOC_00009268
Chr1	stalkie_big_nohaplotig	exon	85231451	85231463	100	-	.	Parent=comp162411_c2_seq1.mrna3;Target=comp162411_c2_seq1 1982 1970 .
Chr1	stalkie_big_nohaplotig	exon	85233054	85233057	100	-	.	Parent=comp162411_c2_seq1.mrna3;Target=comp162411_c2_seq1 1969 1966 .
Chr1	stalkie_big_nohaplotig	exon	85240686	85240692	85	-	.	Parent=comp162411_c2_seq1.mrna3;Target=comp162411_c2_seq1 1965 1959 .
Chr1	stalkie_big_nohaplotig	exon	85244354	85244362	88	-	.	Parent=comp162411_c2_seq1.mrna3;Target=comp162411_c2_seq1 1958 1950 .
Chr1	stalkie_big_nohaplotig	exon	85244440	85244446	100	-	.	Parent=comp162411_c2_seq1.mrna3;Target=comp162411_c2_seq1 1949 1943 .
Chr1	stalkie_big_nohaplotig	exon	85247450	85247492	63	-	.	Parent=comp162411_c2_seq1.mrna3;Target=comp162411_c2_seq1 1942 1898 .
Chr1	stalkie_big_nohaplotig	exon	85247944	85247959	75	-	.	Parent=comp162411_c2_seq1.mrna3;Target=comp162411_c2_seq1 1897 1882 .
Chr1	stalkie_big_nohaplotig	exon	85253692	85253703	100	-	.	Parent=comp162411_c2_seq1.mrna3;Target=comp162411_c2_seq1 1881 1870 .
Chr1	stalkie_big_nohaplotig	exon	85255793	85255834	57	-	.	Parent=comp162411_c2_seq1.mrna3;Target=comp162411_c2_seq1 1869 1825 .
Chr1	stalkie_big_nohaplotig	exon	85256210	85256221	91	-	.	Parent=comp162411_c2_seq1.mrna3;Target=comp162411_c2_seq1 1824 1813 .
Chr1	stalkie_big_nohaplotig	exon	85261059	85261061	100	-	.	Parent=comp162411_c2_seq1.mrna3;Target=comp162411_c2_seq1 1812 1810 .
Chr1	stalkie_big_nohaplotig	exon	85261618	85261624	26	-	.	Parent=comp162411_c2_seq1.mrna3;Target=comp162411_c2_seq1 1809 1784 .
Chr1	stalkie_big_nohaplotig	exon	85261954	85263736	98	-	.	Parent=comp162411_c2_seq1.mrna3;Target=comp162411_c2_seq1 1783 1 .
Chr1	stalkie_big_nohaplotig	CDS	85262795	85262995	.	-	0	Parent=comp162411_c2_seq1.mrna3
Chr1	gffcl	locus	85248702	85250441	.	+	.	ID=RLOC_00009269;geneIDs=FBgn0030855.1.path1;transcripts=FBgn0030855.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	85248702	85250441	.	+	.	ID=FBgn0030855.1.mrna1;geneID=FBgn0030855.1.path1;Name=FBgn0030855.1;Dir=sensecoverage=99.2;identity=99.9;matches=1686;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009269
Chr1	stalkie_big_nohaplotig	exon	85248702	85248998	100	+	.	Parent=FBgn0030855.1.mrna1;Target=FBgn0030855.1 1 297 +
Chr1	stalkie_big_nohaplotig	exon	85249052	85250441	99	+	.	Parent=FBgn0030855.1.mrna1;Target=FBgn0030855.1 298 1687 +
Chr1	stalkie_big_nohaplotig	CDS	85248702	85248998	.	+	0	Parent=FBgn0030855.1.mrna1;Target=FBgn0030855.1 1 297 +
Chr1	stalkie_big_nohaplotig	CDS	85249052	85250440	.	+	0	Parent=FBgn0030855.1.mrna1;Target=FBgn0030855.1 298 1686 +
Chr1	gffcl	locus	85251073	85253292	.	-	.	ID=RLOC_00009270;geneIDs=FBgn0015245.1.path1;transcripts=FBgn0015245.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	85251073	85253292	.	-	.	ID=FBgn0015245.1.mrna1;geneID=FBgn0015245.1.path1;Name=FBgn0015245.1;Dir=sensecoverage=100.0;identity=100.0;matches=1809;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009270
Chr1	stalkie_big_nohaplotig	exon	85251073	85251225	100	-	.	Parent=FBgn0015245.1.mrna1;Target=FBgn0015245.1 1657 1809 +
Chr1	stalkie_big_nohaplotig	exon	85251281	85251466	100	-	.	Parent=FBgn0015245.1.mrna1;Target=FBgn0015245.1 1471 1656 +
Chr1	stalkie_big_nohaplotig	exon	85251521	85252891	100	-	.	Parent=FBgn0015245.1.mrna1;Target=FBgn0015245.1 100 1470 +
Chr1	stalkie_big_nohaplotig	exon	85253194	85253292	100	-	.	Parent=FBgn0015245.1.mrna1;Target=FBgn0015245.1 1 99 +
Chr1	stalkie_big_nohaplotig	CDS	85251073	85251225	.	-	0	Parent=FBgn0015245.1.mrna1;Target=FBgn0015245.1 1657 1809 +
Chr1	stalkie_big_nohaplotig	CDS	85251281	85251466	.	-	0	Parent=FBgn0015245.1.mrna1;Target=FBgn0015245.1 1471 1656 +
Chr1	stalkie_big_nohaplotig	CDS	85251521	85252891	.	-	0	Parent=FBgn0015245.1.mrna1;Target=FBgn0015245.1 100 1470 +
Chr1	stalkie_big_nohaplotig	CDS	85253194	85253292	.	-	0	Parent=FBgn0015245.1.mrna1;Target=FBgn0015245.1 1 99 +
Chr1	gffcl	locus	85310461	86581051	.	-	.	ID=RLOC_00009272;geneIDs=comp155708_c1_seq1.path1;transcripts=comp155708_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	85310461	86581051	.	-	.	ID=comp155708_c1_seq1.mrna1;geneID=comp155708_c1_seq1.path1;Name=comp155708_c1_seq1;Dir=indeterminatecoverage=53.2;identity=100.0;matches=691;mismatches=0;indels=0;unknowns=0;Target=comp155708_c1_seq1 512 393 .;locus=RLOC_00009272
Chr1	stalkie_big_nohaplotig	exon	85310461	85310464	100	-	.	Parent=comp155708_c1_seq1.mrna1;Target=comp155708_c1_seq1 749 746 .
Chr1	stalkie_big_nohaplotig	exon	85351208	85351217	100	-	.	Parent=comp155708_c1_seq1.mrna1;Target=comp155708_c1_seq1 745 736 .
Chr1	stalkie_big_nohaplotig	exon	86580376	86581051	100	-	.	Parent=comp155708_c1_seq1.mrna1;Target=comp155708_c1_seq1 691 16 .
Chr1	stalkie_big_nohaplotig	CDS	86580555	86580674	.	-	0	Parent=comp155708_c1_seq1.mrna1
Chr1	gffcl	locus	85351252	85351606	.	-	.	ID=RLOC_00009273;geneIDs=comp157377_c2_seq1.path2;transcripts=comp157377_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	85351252	85351606	.	-	.	ID=comp157377_c2_seq1.mrna2;geneID=comp157377_c2_seq1.path2;Name=comp157377_c2_seq1;Dir=indeterminatecoverage=100.0;identity=95.2;matches=340;mismatches=14;indels=3;unknowns=0;Target=comp157377_c2_seq1 356 1 .;CDS_Target=comp157377_c2_seq1 271 50 .;locus=RLOC_00009273
Chr1	stalkie_big_nohaplotig	exon	85351252	85351606	95	-	.	Parent=comp157377_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	85351337	85351559	.	-	0	Parent=comp157377_c2_seq1.mrna2
Chr1	gffcl	locus	85417859	85419380	.	-	.	ID=RLOC_00009274;geneIDs=comp162458_c2_seq1.path1;transcripts=comp162458_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	85417859	85419380	.	-	.	ID=comp162458_c2_seq1.mrna1;geneID=comp162458_c2_seq1.path1;Name=comp162458_c2_seq1;Dir=indeterminatecoverage=98.4;identity=94.2;matches=1434;mismatches=88;indels=0;unknowns=0;Target=comp162458_c2_seq1 1531 10 .;CDS_Target=comp162458_c2_seq1 1465 1298 .;locus=RLOC_00009274
Chr1	stalkie_big_nohaplotig	exon	85417859	85419380	94	-	.	Parent=comp162458_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	85417925	85418092	.	-	0	Parent=comp162458_c2_seq1.mrna1
Chr1	gffcl	locus	85477942	86135706	.	.	.	ID=RLOC_00009275;geneIDs=comp58357_c0_seq1.path1,comp117296_c0_seq1.path1,comp155983_c0_seq1.path8;transcripts=comp58357_c0_seq1.mrna1,comp155983_c0_seq1.mrna8,comp117296_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	85477942	86135706	.	+	.	ID=comp58357_c0_seq1.mrna1;geneID=comp58357_c0_seq1.path1;Name=comp58357_c0_seq1;Dir=indeterminatecoverage=84.4;identity=86.6;matches=705;mismatches=52;indels=57;unknowns=2;locus=RLOC_00009275
Chr1	stalkie_big_nohaplotig	exon	85477942	85477946	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 320 316 .
Chr1	stalkie_big_nohaplotig	exon	85479162	85479171	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 330 321 .
Chr1	stalkie_big_nohaplotig	exon	85480594	85480604	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 341 331 .
Chr1	stalkie_big_nohaplotig	exon	85490294	85490311	42	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 373 354 .
Chr1	stalkie_big_nohaplotig	exon	85491158	85491166	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 514 506 .
Chr1	stalkie_big_nohaplotig	exon	85547710	85547712	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 543 541 .
Chr1	stalkie_big_nohaplotig	exon	85551555	85551557	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 546 544 .
Chr1	stalkie_big_nohaplotig	exon	85576003	85576019	88	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 561 547 .
Chr1	stalkie_big_nohaplotig	exon	85598511	85598517	57	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 568 562 .
Chr1	stalkie_big_nohaplotig	exon	85604631	85604636	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 574 569 .
Chr1	stalkie_big_nohaplotig	exon	85610985	85610990	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 580 575 .
Chr1	stalkie_big_nohaplotig	exon	85634968	85634969	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 582 581 .
Chr1	stalkie_big_nohaplotig	exon	85648903	85648911	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 591 583 .
Chr1	stalkie_big_nohaplotig	exon	85656511	85656513	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 617 615 .
Chr1	stalkie_big_nohaplotig	exon	85658526	85658535	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 627 618 .
Chr1	stalkie_big_nohaplotig	exon	85662480	85662489	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 637 628 .
Chr1	stalkie_big_nohaplotig	exon	85667517	85667519	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 640 638 .
Chr1	stalkie_big_nohaplotig	exon	85701894	85701905	83	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 652 641 .
Chr1	stalkie_big_nohaplotig	exon	85711970	85712014	51	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 691 653 .
Chr1	stalkie_big_nohaplotig	exon	85714843	85714847	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 696 692 .
Chr1	stalkie_big_nohaplotig	exon	85722035	85722046	33	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 726 697 .
Chr1	stalkie_big_nohaplotig	exon	85735865	85735873	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 735 727 .
Chr1	stalkie_big_nohaplotig	exon	85766718	85766760	44	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 814 773 .
Chr1	stalkie_big_nohaplotig	exon	85767413	85767422	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 824 815 .
Chr1	stalkie_big_nohaplotig	exon	85813628	85813636	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 872 864 .
Chr1	stalkie_big_nohaplotig	exon	85817920	85817933	37	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 921 890 .
Chr1	stalkie_big_nohaplotig	exon	85863528	85863529	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 954 953 .
Chr1	stalkie_big_nohaplotig	exon	85863565	85863568	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1016 1013 .
Chr1	stalkie_big_nohaplotig	exon	85870861	85870868	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1024 1017 .
Chr1	stalkie_big_nohaplotig	exon	85872966	85872969	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1028 1025 .
Chr1	stalkie_big_nohaplotig	exon	85876163	85876172	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1038 1029 .
Chr1	stalkie_big_nohaplotig	exon	85892953	85892955	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1041 1039 .
Chr1	stalkie_big_nohaplotig	exon	85893953	85893958	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1047 1042 .
Chr1	stalkie_big_nohaplotig	exon	85898269	85898271	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1050 1048 .
Chr1	stalkie_big_nohaplotig	exon	85899721	85899731	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1061 1051 .
Chr1	stalkie_big_nohaplotig	exon	85903972	85903982	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1073 1063 .
Chr1	stalkie_big_nohaplotig	exon	85917858	85917859	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1128 1127 .
Chr1	stalkie_big_nohaplotig	exon	85939818	85939823	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1134 1129 .
Chr1	stalkie_big_nohaplotig	exon	85956077	85956087	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1145 1135 .
Chr1	stalkie_big_nohaplotig	exon	85956139	85956146	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1202 1195 .
Chr1	stalkie_big_nohaplotig	exon	85997975	85997977	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1206 1204 .
Chr1	stalkie_big_nohaplotig	exon	86005361	86005373	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1219 1207 .
Chr1	stalkie_big_nohaplotig	exon	86010804	86010809	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1225 1220 .
Chr1	stalkie_big_nohaplotig	exon	86025517	86025522	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1231 1226 .
Chr1	stalkie_big_nohaplotig	exon	86033705	86033709	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1236 1232 .
Chr1	stalkie_big_nohaplotig	exon	86034247	86034254	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1244 1237 .
Chr1	stalkie_big_nohaplotig	exon	86040420	86040422	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1247 1245 .
Chr1	stalkie_big_nohaplotig	exon	86044891	86044892	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1249 1248 .
Chr1	stalkie_big_nohaplotig	exon	86051405	86051417	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1262 1250 .
Chr1	stalkie_big_nohaplotig	exon	86070225	86070226	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1787 1786 .
Chr1	stalkie_big_nohaplotig	exon	86085936	86085946	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1798 1788 .
Chr1	stalkie_big_nohaplotig	exon	86088953	86088963	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1814 1804 .
Chr1	stalkie_big_nohaplotig	exon	86089391	86089399	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1828 1820 .
Chr1	stalkie_big_nohaplotig	exon	86109302	86109304	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1855 1853 .
Chr1	stalkie_big_nohaplotig	exon	86110277	86110279	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1858 1856 .
Chr1	stalkie_big_nohaplotig	exon	86124355	86124361	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1865 1859 .
Chr1	stalkie_big_nohaplotig	exon	86127752	86127753	100	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1867 1866 .
Chr1	stalkie_big_nohaplotig	exon	86135429	86135706	99	+	.	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 2145 1868 .
Chr1	stalkie_big_nohaplotig	CDS	86010804	86010809	.	+	0	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1225 1220 .
Chr1	stalkie_big_nohaplotig	CDS	86025517	86025522	.	+	0	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1231 1226 .
Chr1	stalkie_big_nohaplotig	CDS	86033705	86033709	.	+	0	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1236 1232 .
Chr1	stalkie_big_nohaplotig	CDS	86034247	86034254	.	+	1	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1244 1237 .
Chr1	stalkie_big_nohaplotig	CDS	86040420	86040422	.	+	2	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1247 1245 .
Chr1	stalkie_big_nohaplotig	CDS	86044891	86044892	.	+	2	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1249 1248 .
Chr1	stalkie_big_nohaplotig	CDS	86051405	86051417	.	+	0	Parent=comp58357_c0_seq1.mrna1;Target=comp58357_c0_seq1 1262 1250 .
Chr1	stalkie_big_nohaplotig	mRNA	85634464	85635194	.	+	.	ID=comp155983_c0_seq1.mrna8;geneID=comp155983_c0_seq1.path8;Name=comp155983_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=722;mismatches=9;indels=0;unknowns=0;Target=comp155983_c0_seq1 731 1 .;CDS_Target=comp155983_c0_seq1 105 1 .;locus=RLOC_00009275
Chr1	stalkie_big_nohaplotig	exon	85634464	85635194	98	+	.	Parent=comp155983_c0_seq1.mrna8
Chr1	stalkie_big_nohaplotig	CDS	85634464	85634568	.	+	0	Parent=comp155983_c0_seq1.mrna8
Chr1	stalkie_big_nohaplotig	mRNA	85875398	85876182	.	-	.	ID=comp117296_c0_seq1.mrna1;geneID=comp117296_c0_seq1.path1;Name=comp117296_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.9;matches=784;mismatches=1;indels=0;unknowns=0;Target=comp117296_c0_seq1 797 13 .;CDS_Target=comp117296_c0_seq1 452 207 .;locus=RLOC_00009275
Chr1	stalkie_big_nohaplotig	exon	85875398	85876182	99	-	.	Parent=comp117296_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	85875743	85875988	.	-	0	Parent=comp117296_c0_seq1.mrna1
Chr1	gffcl	locus	85556861	85558695	.	-	.	ID=RLOC_00009276;geneIDs=FBgn0000259.1.path1;transcripts=FBgn0000259.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	85556861	85558695	.	-	.	ID=FBgn0000259.1.mrna1;geneID=FBgn0000259.1.path1;Name=FBgn0000259.1;Dir=sensecoverage=100.0;identity=99.7;matches=766;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009276
Chr1	stalkie_big_nohaplotig	exon	85556861	85556948	97	-	.	Parent=FBgn0000259.1.mrna1;Target=FBgn0000259.1 681 768 +
Chr1	stalkie_big_nohaplotig	exon	85557000	85557189	100	-	.	Parent=FBgn0000259.1.mrna1;Target=FBgn0000259.1 491 680 +
Chr1	stalkie_big_nohaplotig	exon	85557286	85557477	100	-	.	Parent=FBgn0000259.1.mrna1;Target=FBgn0000259.1 299 490 +
Chr1	stalkie_big_nohaplotig	exon	85557530	85557632	100	-	.	Parent=FBgn0000259.1.mrna1;Target=FBgn0000259.1 196 298 +
Chr1	stalkie_big_nohaplotig	exon	85558000	85558075	100	-	.	Parent=FBgn0000259.1.mrna1;Target=FBgn0000259.1 120 195 +
Chr1	stalkie_big_nohaplotig	exon	85558577	85558695	100	-	.	Parent=FBgn0000259.1.mrna1;Target=FBgn0000259.1 1 119 +
Chr1	stalkie_big_nohaplotig	CDS	85556861	85556948	.	-	1	Parent=FBgn0000259.1.mrna1;Target=FBgn0000259.1 681 768 +
Chr1	stalkie_big_nohaplotig	CDS	85557000	85557189	.	-	2	Parent=FBgn0000259.1.mrna1;Target=FBgn0000259.1 491 680 +
Chr1	stalkie_big_nohaplotig	CDS	85557286	85557477	.	-	2	Parent=FBgn0000259.1.mrna1;Target=FBgn0000259.1 299 490 +
Chr1	stalkie_big_nohaplotig	CDS	85557530	85557632	.	-	0	Parent=FBgn0000259.1.mrna1;Target=FBgn0000259.1 196 298 +
Chr1	stalkie_big_nohaplotig	CDS	85558000	85558075	.	-	1	Parent=FBgn0000259.1.mrna1;Target=FBgn0000259.1 120 195 +
Chr1	stalkie_big_nohaplotig	CDS	85558577	85558695	.	-	0	Parent=FBgn0000259.1.mrna1;Target=FBgn0000259.1 1 119 +
Chr1	gffcl	locus	85612822	85614893	.	+	.	ID=RLOC_00009277;geneIDs=FBgn0001218.1.path1,FBgn0001219.2.path1;transcripts=FBgn0001218.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	85612822	85614893	.	+	.	ID=FBgn0001218.1.mrna1;geneID=FBgn0001218.1.path1;Name=FBgn0001218.1;Dir=sensecoverage=99.9;identity=100.0;matches=1996;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009277
Chr1	stalkie_big_nohaplotig	exon	85612822	85612980	100	+	.	Parent=FBgn0001218.1.mrna1;Target=FBgn0001218.1 3 161 +
Chr1	stalkie_big_nohaplotig	exon	85613057	85614893	100	+	.	Parent=FBgn0001218.1.mrna1;Target=FBgn0001218.1 162 1998 +
Chr1	stalkie_big_nohaplotig	CDS	85612823	85612980	.	+	0	Parent=FBgn0001218.1.mrna1;Target=FBgn0001218.1 4 161 +
Chr1	stalkie_big_nohaplotig	CDS	85613057	85614893	.	+	1	Parent=FBgn0001218.1.mrna1;Target=FBgn0001218.1 162 1998 +
Chr1	gffcl	locus	85720635	85726264	.	-	.	ID=RLOC_00009279;geneIDs=FBgn0261274.1.path1;transcripts=FBgn0261274.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	85720635	85726264	.	-	.	ID=FBgn0261274.1.mrna1;geneID=FBgn0261274.1.path1;Name=FBgn0261274.1;Dir=sensecoverage=100.0;identity=99.4;matches=1441;mismatches=8;indels=0;unknowns=0;locus=RLOC_00009279
Chr1	stalkie_big_nohaplotig	exon	85720635	85720683	100	-	.	Parent=FBgn0261274.1.mrna1;Target=FBgn0261274.1 1401 1449 +
Chr1	stalkie_big_nohaplotig	exon	85720757	85720911	100	-	.	Parent=FBgn0261274.1.mrna1;Target=FBgn0261274.1 1246 1400 +
Chr1	stalkie_big_nohaplotig	exon	85721912	85722065	99	-	.	Parent=FBgn0261274.1.mrna1;Target=FBgn0261274.1 1092 1245 +
Chr1	stalkie_big_nohaplotig	exon	85722132	85722805	99	-	.	Parent=FBgn0261274.1.mrna1;Target=FBgn0261274.1 418 1091 +
Chr1	stalkie_big_nohaplotig	exon	85725788	85726054	98	-	.	Parent=FBgn0261274.1.mrna1;Target=FBgn0261274.1 151 417 +
Chr1	stalkie_big_nohaplotig	exon	85726115	85726264	100	-	.	Parent=FBgn0261274.1.mrna1;Target=FBgn0261274.1 1 150 +
Chr1	stalkie_big_nohaplotig	CDS	85720635	85720683	.	-	1	Parent=FBgn0261274.1.mrna1;Target=FBgn0261274.1 1401 1449 +
Chr1	stalkie_big_nohaplotig	CDS	85720757	85720911	.	-	0	Parent=FBgn0261274.1.mrna1;Target=FBgn0261274.1 1246 1400 +
Chr1	stalkie_big_nohaplotig	CDS	85721912	85722065	.	-	1	Parent=FBgn0261274.1.mrna1;Target=FBgn0261274.1 1092 1245 +
Chr1	stalkie_big_nohaplotig	CDS	85722132	85722805	.	-	0	Parent=FBgn0261274.1.mrna1;Target=FBgn0261274.1 418 1091 +
Chr1	stalkie_big_nohaplotig	CDS	85725788	85726054	.	-	0	Parent=FBgn0261274.1.mrna1;Target=FBgn0261274.1 151 417 +
Chr1	stalkie_big_nohaplotig	CDS	85726115	85726264	.	-	0	Parent=FBgn0261274.1.mrna1;Target=FBgn0261274.1 1 150 +
Chr1	gffcl	locus	85782186	85782418	.	-	.	ID=RLOC_00009280;geneIDs=comp151473_c4_seq1.path1;transcripts=comp151473_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	85782186	85782418	.	-	.	ID=comp151473_c4_seq1.mrna1;geneID=comp151473_c4_seq1.path1;Name=comp151473_c4_seq1;Dir=indeterminatecoverage=23.6;identity=99.6;matches=232;mismatches=1;indels=0;unknowns=0;Target=comp151473_c4_seq1 233 1 .;locus=RLOC_00009280
Chr1	stalkie_big_nohaplotig	exon	85782186	85782418	99	-	.	Parent=comp151473_c4_seq1.mrna1
Chr1	gffcl	locus	85825986	86076125	.	+	.	ID=RLOC_00009281;geneIDs=FBgn0030266.1.path1,FBgn0030412.1.path1;transcripts=FBgn0030412.1.mrna1,FBgn0030266.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	85825986	86076125	.	+	.	ID=FBgn0030412.1.mrna1;geneID=FBgn0030412.1.path1;Name=FBgn0030412.1;Dir=sensecoverage=83.8;identity=98.5;matches=3310;mismatches=28;indels=21;unknowns=0;locus=RLOC_00009281
Chr1	stalkie_big_nohaplotig	exon	85825986	85826085	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 143 242 +
Chr1	stalkie_big_nohaplotig	exon	85826138	85826326	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 243 431 +
Chr1	stalkie_big_nohaplotig	exon	85826383	85826517	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 432 566 +
Chr1	stalkie_big_nohaplotig	exon	85835070	85835133	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 567 630 +
Chr1	stalkie_big_nohaplotig	exon	85835190	85835397	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 631 838 +
Chr1	stalkie_big_nohaplotig	exon	85845020	85845095	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 839 914 +
Chr1	stalkie_big_nohaplotig	exon	85845152	85845306	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 915 1069 +
Chr1	stalkie_big_nohaplotig	exon	85845402	85845583	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 1070 1251 +
Chr1	stalkie_big_nohaplotig	exon	85845645	85845809	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 1252 1416 +
Chr1	stalkie_big_nohaplotig	exon	85845873	85846181	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 1417 1725 +
Chr1	stalkie_big_nohaplotig	exon	85846242	85846381	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 1726 1865 +
Chr1	stalkie_big_nohaplotig	exon	85866407	85866584	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 1866 2043 +
Chr1	stalkie_big_nohaplotig	exon	85868859	85869684	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 2044 2869 +
Chr1	stalkie_big_nohaplotig	exon	85923775	85923891	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 2870 2986 +
Chr1	stalkie_big_nohaplotig	exon	85933958	85934080	99	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 2987 3109 +
Chr1	stalkie_big_nohaplotig	exon	85939418	85939544	99	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3110 3236 +
Chr1	stalkie_big_nohaplotig	exon	85942702	85942712	81	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3237 3247 +
Chr1	stalkie_big_nohaplotig	exon	85948054	85948058	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3248 3252 +
Chr1	stalkie_big_nohaplotig	exon	85949278	85949285	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3260 3267 +
Chr1	stalkie_big_nohaplotig	exon	85951478	85951483	83	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3268 3273 +
Chr1	stalkie_big_nohaplotig	exon	85954000	85954007	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3274 3281 +
Chr1	stalkie_big_nohaplotig	exon	85954538	85954545	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3296 3303 +
Chr1	stalkie_big_nohaplotig	exon	85954572	85954579	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3351 3358 +
Chr1	stalkie_big_nohaplotig	exon	85960492	85960506	73	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3359 3373 +
Chr1	stalkie_big_nohaplotig	exon	85960517	85960526	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3429 3438 +
Chr1	stalkie_big_nohaplotig	exon	85966990	85966993	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3439 3442 +
Chr1	stalkie_big_nohaplotig	exon	85979158	85979171	78	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3443 3455 +
Chr1	stalkie_big_nohaplotig	exon	85995453	85995463	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3456 3466 +
Chr1	stalkie_big_nohaplotig	exon	86004331	86004333	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3467 3469 +
Chr1	stalkie_big_nohaplotig	exon	86025290	86025302	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3470 3482 +
Chr1	stalkie_big_nohaplotig	exon	86030768	86030769	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3504 3505 +
Chr1	stalkie_big_nohaplotig	exon	86035125	86035135	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3506 3516 +
Chr1	stalkie_big_nohaplotig	exon	86037918	86037922	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3533 3537 +
Chr1	stalkie_big_nohaplotig	exon	86039093	86039095	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3538 3540 +
Chr1	stalkie_big_nohaplotig	exon	86039492	86039500	88	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3541 3549 +
Chr1	stalkie_big_nohaplotig	exon	86042174	86042216	49	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3550 3612 +
Chr1	stalkie_big_nohaplotig	exon	86042915	86042921	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3613 3619 +
Chr1	stalkie_big_nohaplotig	exon	86057397	86057408	91	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3620 3631 +
Chr1	stalkie_big_nohaplotig	exon	86069017	86069029	84	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3632 3644 +
Chr1	stalkie_big_nohaplotig	exon	86073143	86073144	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3645 3646 +
Chr1	stalkie_big_nohaplotig	exon	86075841	86075849	88	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3647 3655 +
Chr1	stalkie_big_nohaplotig	exon	86076124	86076125	100	+	.	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3656 3657 +
Chr1	stalkie_big_nohaplotig	CDS	85825988	85826085	.	+	0	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 145 242 +
Chr1	stalkie_big_nohaplotig	CDS	85826138	85826326	.	+	1	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 243 431 +
Chr1	stalkie_big_nohaplotig	CDS	85826383	85826517	.	+	1	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 432 566 +
Chr1	stalkie_big_nohaplotig	CDS	85835070	85835133	.	+	1	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 567 630 +
Chr1	stalkie_big_nohaplotig	CDS	85835190	85835397	.	+	0	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 631 838 +
Chr1	stalkie_big_nohaplotig	CDS	85845020	85845095	.	+	2	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 839 914 +
Chr1	stalkie_big_nohaplotig	CDS	85845152	85845306	.	+	1	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 915 1069 +
Chr1	stalkie_big_nohaplotig	CDS	85845402	85845583	.	+	2	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 1070 1251 +
Chr1	stalkie_big_nohaplotig	CDS	85845645	85845809	.	+	0	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 1252 1416 +
Chr1	stalkie_big_nohaplotig	CDS	85845873	85846181	.	+	0	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 1417 1725 +
Chr1	stalkie_big_nohaplotig	CDS	85846242	85846381	.	+	0	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 1726 1865 +
Chr1	stalkie_big_nohaplotig	CDS	85866407	85866584	.	+	1	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 1866 2043 +
Chr1	stalkie_big_nohaplotig	CDS	85868859	85869684	.	+	0	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 2044 2869 +
Chr1	stalkie_big_nohaplotig	CDS	85923775	85923891	.	+	2	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 2870 2986 +
Chr1	stalkie_big_nohaplotig	CDS	85933958	85934080	.	+	2	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 2987 3109 +
Chr1	stalkie_big_nohaplotig	CDS	85939418	85939544	.	+	2	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3110 3236 +
Chr1	stalkie_big_nohaplotig	CDS	85942702	85942712	.	+	1	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3237 3247 +
Chr1	stalkie_big_nohaplotig	CDS	85948054	85948058	.	+	2	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3248 3252 +
Chr1	stalkie_big_nohaplotig	CDS	85949278	85949285	.	+	0	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3260 3267 +
Chr1	stalkie_big_nohaplotig	CDS	85951478	85951483	.	+	1	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3268 3273 +
Chr1	stalkie_big_nohaplotig	CDS	85954000	85954007	.	+	1	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3274 3281 +
Chr1	stalkie_big_nohaplotig	CDS	85954538	85954545	.	+	2	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3296 3303 +
Chr1	stalkie_big_nohaplotig	CDS	85954572	85954579	.	+	0	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3351 3358 +
Chr1	stalkie_big_nohaplotig	CDS	85960492	85960506	.	+	1	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3359 3373 +
Chr1	stalkie_big_nohaplotig	CDS	85960517	85960526	.	+	1	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3429 3438 +
Chr1	stalkie_big_nohaplotig	CDS	85966990	85966993	.	+	0	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3439 3442 +
Chr1	stalkie_big_nohaplotig	CDS	85979158	85979171	.	+	2	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3443 3455 +
Chr1	stalkie_big_nohaplotig	CDS	85995453	85995463	.	+	0	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3456 3466 +
Chr1	stalkie_big_nohaplotig	CDS	86004331	86004333	.	+	1	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3467 3469 +
Chr1	stalkie_big_nohaplotig	CDS	86025290	86025302	.	+	1	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3470 3482 +
Chr1	stalkie_big_nohaplotig	CDS	86030768	86030769	.	+	0	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3504 3505 +
Chr1	stalkie_big_nohaplotig	CDS	86035125	86035135	.	+	1	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3506 3516 +
Chr1	stalkie_big_nohaplotig	CDS	86037918	86037922	.	+	2	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3533 3537 +
Chr1	stalkie_big_nohaplotig	CDS	86039093	86039095	.	+	0	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3538 3540 +
Chr1	stalkie_big_nohaplotig	CDS	86039492	86039500	.	+	0	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3541 3549 +
Chr1	stalkie_big_nohaplotig	CDS	86042174	86042216	.	+	0	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3550 3612 +
Chr1	stalkie_big_nohaplotig	CDS	86042915	86042921	.	+	2	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3613 3619 +
Chr1	stalkie_big_nohaplotig	CDS	86057397	86057408	.	+	1	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3620 3631 +
Chr1	stalkie_big_nohaplotig	CDS	86069017	86069029	.	+	1	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3632 3644 +
Chr1	stalkie_big_nohaplotig	CDS	86073143	86073144	.	+	0	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3645 3646 +
Chr1	stalkie_big_nohaplotig	CDS	86075841	86075849	.	+	1	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3647 3655 +
Chr1	stalkie_big_nohaplotig	CDS	86076124	86076125	.	+	1	Parent=FBgn0030412.1.mrna1;Target=FBgn0030412.1 3656 3657 +
Chr1	stalkie_big_nohaplotig	mRNA	85975983	85985667	.	+	.	ID=FBgn0030266.1.mrna1;geneID=FBgn0030266.1.path1;Name=FBgn0030266.1;Dir=sensecoverage=100.0;identity=99.9;matches=9465;mismatches=5;indels=1;unknowns=0;locus=RLOC_00009281
Chr1	stalkie_big_nohaplotig	exon	85975983	85978677	99	+	.	Parent=FBgn0030266.1.mrna1;Target=FBgn0030266.1 1 2695 +
Chr1	stalkie_big_nohaplotig	exon	85978831	85983190	99	+	.	Parent=FBgn0030266.1.mrna1;Target=FBgn0030266.1 2696 7055 +
Chr1	stalkie_big_nohaplotig	exon	85983253	85985667	99	+	.	Parent=FBgn0030266.1.mrna1;Target=FBgn0030266.1 7056 9471 +
Chr1	stalkie_big_nohaplotig	CDS	85975983	85978677	.	+	0	Parent=FBgn0030266.1.mrna1;Target=FBgn0030266.1 1 2695 +
Chr1	stalkie_big_nohaplotig	CDS	85978831	85983190	.	+	2	Parent=FBgn0030266.1.mrna1;Target=FBgn0030266.1 2696 7055 +
Chr1	stalkie_big_nohaplotig	CDS	85983253	85985667	.	+	1	Parent=FBgn0030266.1.mrna1;Target=FBgn0030266.1 7056 9471 +
Chr1	gffcl	locus	85855735	86044020	.	+	.	ID=RLOC_00009282;geneIDs=comp163951_c1_seq1.path3;transcripts=comp163951_c1_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	85855735	86044020	.	+	.	ID=comp163951_c1_seq1.mrna3;geneID=comp163951_c1_seq1.path3;Name=comp163951_c1_seq1;Dir=antisensecoverage=64.0;identity=96.4;matches=978;mismatches=35;indels=2;unknowns=0;Target=comp163951_c1_seq1 966 1103 .;locus=RLOC_00009282
Chr1	stalkie_big_nohaplotig	exon	85855735	85856019	96	+	.	Parent=comp163951_c1_seq1.mrna3;Target=comp163951_c1_seq1 821 1104 -
Chr1	stalkie_big_nohaplotig	exon	85856332	85856424	100	+	.	Parent=comp163951_c1_seq1.mrna3;Target=comp163951_c1_seq1 728 820 -
Chr1	stalkie_big_nohaplotig	exon	85890913	85890916	100	+	.	Parent=comp163951_c1_seq1.mrna3;Target=comp163951_c1_seq1 724 727 -
Chr1	stalkie_big_nohaplotig	exon	85937845	85937994	99	+	.	Parent=comp163951_c1_seq1.mrna3;Target=comp163951_c1_seq1 574 723 -
Chr1	stalkie_big_nohaplotig	exon	86043342	86043435	95	+	.	Parent=comp163951_c1_seq1.mrna3;Target=comp163951_c1_seq1 479 573 -
Chr1	stalkie_big_nohaplotig	exon	86043535	86043547	100	+	.	Parent=comp163951_c1_seq1.mrna3;Target=comp163951_c1_seq1 466 478 -
Chr1	stalkie_big_nohaplotig	exon	86043646	86044020	94	+	.	Parent=comp163951_c1_seq1.mrna3;Target=comp163951_c1_seq1 91 465 -
Chr1	stalkie_big_nohaplotig	CDS	85855736	85855874	.	+	0	Parent=comp163951_c1_seq1.mrna3
Chr1	gffcl	locus	86078641	86081189	.	+	.	ID=RLOC_00009283;geneIDs=FBgn0011837.1.path1,comp149389_c0_seq1.path1;transcripts=FBgn0011837.1.mrna1,comp149389_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86078641	86081189	.	+	.	ID=FBgn0011837.1.mrna1;geneID=FBgn0011837.1.path1;Name=FBgn0011837.1;Dir=sensecoverage=93.9;identity=100.0;matches=1161;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009283
Chr1	stalkie_big_nohaplotig	exon	86078641	86078981	100	+	.	Parent=FBgn0011837.1.mrna1;Target=FBgn0011837.1 76 416 +
Chr1	stalkie_big_nohaplotig	exon	86080370	86081189	100	+	.	Parent=FBgn0011837.1.mrna1;Target=FBgn0011837.1 417 1236 +
Chr1	stalkie_big_nohaplotig	CDS	86078641	86078981	.	+	0	Parent=FBgn0011837.1.mrna1;Target=FBgn0011837.1 76 416 +
Chr1	stalkie_big_nohaplotig	CDS	86080370	86081189	.	+	1	Parent=FBgn0011837.1.mrna1;Target=FBgn0011837.1 417 1236 +
Chr1	stalkie_big_nohaplotig	mRNA	86078962	86080391	.	+	.	ID=comp149389_c0_seq1.mrna1;geneID=comp149389_c0_seq1.path1;Name=comp149389_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=1263;mismatches=2;indels=4;unknowns=0;Target=comp149389_c0_seq1 886 975 .;locus=RLOC_00009283
Chr1	stalkie_big_nohaplotig	exon	86078962	86078981	100	+	.	Parent=comp149389_c0_seq1.mrna1;Target=comp149389_c0_seq1 1248 1267 -
Chr1	stalkie_big_nohaplotig	exon	86079145	86080391	99	+	.	Parent=comp149389_c0_seq1.mrna1;Target=comp149389_c0_seq1 1 1247 -
Chr1	stalkie_big_nohaplotig	CDS	86079417	86079506	.	+	0	Parent=comp149389_c0_seq1.mrna1
Chr1	gffcl	locus	86119069	86120100	.	+	.	ID=RLOC_00009284;geneIDs=Dp_FBgn0244711.1.path1;transcripts=Dp_FBgn0244711.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86119069	86120100	.	+	.	ID=Dp_FBgn0244711.1.mrna1;geneID=Dp_FBgn0244711.1.path1;Name=Dp_FBgn0244711.1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1023;mismatches=9;indels=0;unknowns=0;Target=Dp_FBgn0244711.1 1032 1 .;locus=RLOC_00009284
Chr1	stalkie_big_nohaplotig	exon	86119069	86120100	99	+	.	Parent=Dp_FBgn0244711.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	86119069	86120100	.	+	0	Parent=Dp_FBgn0244711.1.mrna1
Chr1	gffcl	locus	86130659	86132334	.	-	.	ID=RLOC_00009285;geneIDs=comp159129_c0_seq1.path1;transcripts=comp159129_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86130659	86132334	.	-	.	ID=comp159129_c0_seq1.mrna1;geneID=comp159129_c0_seq1.path1;Name=comp159129_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=1654;mismatches=21;indels=29;unknowns=0;Target=comp159129_c0_seq1 1703 1 .;CDS_Target=comp159129_c0_seq1 1610 1383 .;locus=RLOC_00009285
Chr1	stalkie_big_nohaplotig	exon	86130659	86132334	97	-	.	Parent=comp159129_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	86130752	86130967	.	-	0	Parent=comp159129_c0_seq1.mrna1
Chr1	gffcl	locus	86132844	86133565	.	+	.	ID=RLOC_00009286;geneIDs=FBgn0028474.path1;transcripts=FBgn0028474.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86132844	86133565	.	+	.	ID=FBgn0028474.mrna1;geneID=FBgn0028474.path1;Name=FBgn0028474;Dir=sensecoverage=100.0;identity=99.8;matches=599;mismatches=0;indels=1;unknowns=0;Target=FBgn0028474 3 53 +;locus=RLOC_00009286
Chr1	stalkie_big_nohaplotig	exon	86132844	86132954	99	+	.	Parent=FBgn0028474.mrna1;Target=FBgn0028474 1 112 +
Chr1	stalkie_big_nohaplotig	exon	86133009	86133406	100	+	.	Parent=FBgn0028474.mrna1;Target=FBgn0028474 113 510 +
Chr1	stalkie_big_nohaplotig	exon	86133476	86133565	100	+	.	Parent=FBgn0028474.mrna1;Target=FBgn0028474 511 600 +
Chr1	stalkie_big_nohaplotig	CDS	86132846	86132895	.	+	0	Parent=FBgn0028474.mrna1
Chr1	gffcl	locus	86134089	86140011	.	.	.	ID=RLOC_00009287;geneIDs=FBgn0015794.1.path1,comp147714_c0_seq1.path1;transcripts=FBgn0015794.1.mrna1,comp147714_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86134089	86140011	.	-	.	ID=FBgn0015794.1.mrna1;geneID=FBgn0015794.1.path1;Name=FBgn0015794.1;Dir=sensecoverage=100.0;identity=100.0;matches=612;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009287
Chr1	stalkie_big_nohaplotig	exon	86134089	86134181	100	-	.	Parent=FBgn0015794.1.mrna1;Target=FBgn0015794.1 520 612 +
Chr1	stalkie_big_nohaplotig	exon	86134237	86134669	100	-	.	Parent=FBgn0015794.1.mrna1;Target=FBgn0015794.1 87 519 +
Chr1	stalkie_big_nohaplotig	exon	86139926	86140011	100	-	.	Parent=FBgn0015794.1.mrna1;Target=FBgn0015794.1 1 86 +
Chr1	stalkie_big_nohaplotig	CDS	86134089	86134181	.	-	0	Parent=FBgn0015794.1.mrna1;Target=FBgn0015794.1 520 612 +
Chr1	stalkie_big_nohaplotig	CDS	86134237	86134669	.	-	1	Parent=FBgn0015794.1.mrna1;Target=FBgn0015794.1 87 519 +
Chr1	stalkie_big_nohaplotig	CDS	86139926	86140011	.	-	0	Parent=FBgn0015794.1.mrna1;Target=FBgn0015794.1 1 86 +
Chr1	stalkie_big_nohaplotig	mRNA	86139166	86139949	.	+	.	ID=comp147714_c0_seq1.mrna1;geneID=comp147714_c0_seq1.path1;Name=comp147714_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=784;mismatches=0;indels=0;unknowns=0;Target=comp147714_c0_seq1 784 1 .;CDS_Target=comp147714_c0_seq1 143 3 .;locus=RLOC_00009287
Chr1	stalkie_big_nohaplotig	exon	86139166	86139949	100	+	.	Parent=comp147714_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	86139168	86139308	.	+	0	Parent=comp147714_c0_seq1.mrna1
Chr1	gffcl	locus	86145050	86145678	.	-	.	ID=RLOC_00009288;geneIDs=comp154574_c0_seq1.path1;transcripts=comp154574_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86145050	86145678	.	-	.	ID=comp154574_c0_seq1.mrna1;geneID=comp154574_c0_seq1.path1;Name=comp154574_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.2;matches=276;mismatches=14;indels=0;unknowns=0;Target=comp154574_c0_seq1 149 96 .;locus=RLOC_00009288
Chr1	stalkie_big_nohaplotig	exon	86145050	86145093	93	-	.	Parent=comp154574_c0_seq1.mrna1;Target=comp154574_c0_seq1 292 249 .
Chr1	stalkie_big_nohaplotig	exon	86145433	86145678	95	-	.	Parent=comp154574_c0_seq1.mrna1;Target=comp154574_c0_seq1 246 1 .
Chr1	stalkie_big_nohaplotig	CDS	86145530	86145583	.	-	0	Parent=comp154574_c0_seq1.mrna1
Chr1	gffcl	locus	86209111	86305316	.	-	.	ID=RLOC_00009289;geneIDs=FBgn0025625.1.path1;transcripts=FBgn0025625.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86209111	86305316	.	-	.	ID=FBgn0025625.1.mrna1;geneID=FBgn0025625.1.path1;Name=FBgn0025625.1;Dir=sensecoverage=100.0;identity=99.9;matches=3604;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009289
Chr1	stalkie_big_nohaplotig	exon	86209111	86210011	100	-	.	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 2706 3606 +
Chr1	stalkie_big_nohaplotig	exon	86256326	86256695	99	-	.	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 2336 2705 +
Chr1	stalkie_big_nohaplotig	exon	86256772	86256878	100	-	.	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 2229 2335 +
Chr1	stalkie_big_nohaplotig	exon	86256931	86257052	100	-	.	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 2107 2228 +
Chr1	stalkie_big_nohaplotig	exon	86257109	86257312	100	-	.	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 1903 2106 +
Chr1	stalkie_big_nohaplotig	exon	86274848	86275740	99	-	.	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 1010 1902 +
Chr1	stalkie_big_nohaplotig	exon	86275823	86275946	100	-	.	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 886 1009 +
Chr1	stalkie_big_nohaplotig	exon	86276031	86276201	100	-	.	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 715 885 +
Chr1	stalkie_big_nohaplotig	exon	86276252	86276367	100	-	.	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 599 714 +
Chr1	stalkie_big_nohaplotig	exon	86294925	86294988	100	-	.	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 535 598 +
Chr1	stalkie_big_nohaplotig	exon	86295055	86295171	100	-	.	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 418 534 +
Chr1	stalkie_big_nohaplotig	exon	86304203	86304465	100	-	.	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 155 417 +
Chr1	stalkie_big_nohaplotig	exon	86304525	86304652	100	-	.	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 27 154 +
Chr1	stalkie_big_nohaplotig	exon	86305291	86305316	100	-	.	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 1 26 +
Chr1	stalkie_big_nohaplotig	CDS	86209111	86210011	.	-	1	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 2706 3606 +
Chr1	stalkie_big_nohaplotig	CDS	86256326	86256695	.	-	2	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 2336 2705 +
Chr1	stalkie_big_nohaplotig	CDS	86256772	86256878	.	-	1	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 2229 2335 +
Chr1	stalkie_big_nohaplotig	CDS	86256931	86257052	.	-	0	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 2107 2228 +
Chr1	stalkie_big_nohaplotig	CDS	86257109	86257312	.	-	0	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 1903 2106 +
Chr1	stalkie_big_nohaplotig	CDS	86274848	86275740	.	-	2	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 1010 1902 +
Chr1	stalkie_big_nohaplotig	CDS	86275823	86275946	.	-	0	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 886 1009 +
Chr1	stalkie_big_nohaplotig	CDS	86276031	86276201	.	-	0	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 715 885 +
Chr1	stalkie_big_nohaplotig	CDS	86276252	86276367	.	-	2	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 599 714 +
Chr1	stalkie_big_nohaplotig	CDS	86294925	86294988	.	-	0	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 535 598 +
Chr1	stalkie_big_nohaplotig	CDS	86295055	86295171	.	-	0	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 418 534 +
Chr1	stalkie_big_nohaplotig	CDS	86304203	86304465	.	-	2	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 155 417 +
Chr1	stalkie_big_nohaplotig	CDS	86304525	86304652	.	-	1	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 27 154 +
Chr1	stalkie_big_nohaplotig	CDS	86305291	86305316	.	-	0	Parent=FBgn0025625.1.mrna1;Target=FBgn0025625.1 1 26 +
Chr1	gffcl	locus	86390012	86390383	.	-	.	ID=RLOC_00009291;geneIDs=comp137649_c1_seq1.path1;transcripts=comp137649_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86390012	86390383	.	-	.	ID=comp137649_c1_seq1.mrna1;geneID=comp137649_c1_seq1.path1;Name=comp137649_c1_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=264;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009291
Chr1	stalkie_big_nohaplotig	exon	86390012	86390048	100	-	.	Parent=comp137649_c1_seq1.mrna1;Target=comp137649_c1_seq1 1 37 -
Chr1	stalkie_big_nohaplotig	exon	86390098	86390170	100	-	.	Parent=comp137649_c1_seq1.mrna1;Target=comp137649_c1_seq1 38 110 -
Chr1	stalkie_big_nohaplotig	exon	86390229	86390383	99	-	.	Parent=comp137649_c1_seq1.mrna1;Target=comp137649_c1_seq1 111 265 -
Chr1	stalkie_big_nohaplotig	CDS	86390130	86390170	.	-	2	Parent=comp137649_c1_seq1.mrna1;Target=comp137649_c1_seq1 70 110 .
Chr1	stalkie_big_nohaplotig	CDS	86390229	86390382	.	-	0	Parent=comp137649_c1_seq1.mrna1;Target=comp137649_c1_seq1 111 264 .
Chr1	gffcl	locus	86408136	86437071	.	.	.	ID=RLOC_00009292;geneIDs=FBgn0003464.1.path1,comp135200_c0_seq1.path1;transcripts=FBgn0003464.1.mrna1,comp135200_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86408136	86437071	.	+	.	ID=FBgn0003464.1.mrna1;geneID=FBgn0003464.1.path1;Name=FBgn0003464.1;Dir=sensecoverage=100.0;identity=100.0;matches=4362;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009292
Chr1	stalkie_big_nohaplotig	exon	86408136	86408356	100	+	.	Parent=FBgn0003464.1.mrna1;Target=FBgn0003464.1 1 221 +
Chr1	stalkie_big_nohaplotig	exon	86418263	86418804	100	+	.	Parent=FBgn0003464.1.mrna1;Target=FBgn0003464.1 222 763 +
Chr1	stalkie_big_nohaplotig	exon	86427232	86428111	100	+	.	Parent=FBgn0003464.1.mrna1;Target=FBgn0003464.1 764 1643 +
Chr1	stalkie_big_nohaplotig	exon	86428297	86428499	100	+	.	Parent=FBgn0003464.1.mrna1;Target=FBgn0003464.1 1644 1846 +
Chr1	stalkie_big_nohaplotig	exon	86428584	86428853	100	+	.	Parent=FBgn0003464.1.mrna1;Target=FBgn0003464.1 1847 2116 +
Chr1	stalkie_big_nohaplotig	exon	86428903	86430356	100	+	.	Parent=FBgn0003464.1.mrna1;Target=FBgn0003464.1 2117 3570 +
Chr1	stalkie_big_nohaplotig	exon	86430414	86430620	100	+	.	Parent=FBgn0003464.1.mrna1;Target=FBgn0003464.1 3571 3777 +
Chr1	stalkie_big_nohaplotig	exon	86436372	86436638	100	+	.	Parent=FBgn0003464.1.mrna1;Target=FBgn0003464.1 3778 4044 +
Chr1	stalkie_big_nohaplotig	exon	86436698	86436840	100	+	.	Parent=FBgn0003464.1.mrna1;Target=FBgn0003464.1 4045 4187 +
Chr1	stalkie_big_nohaplotig	exon	86436897	86437071	100	+	.	Parent=FBgn0003464.1.mrna1;Target=FBgn0003464.1 4188 4362 +
Chr1	stalkie_big_nohaplotig	CDS	86408136	86408356	.	+	0	Parent=FBgn0003464.1.mrna1;Target=FBgn0003464.1 1 221 +
Chr1	stalkie_big_nohaplotig	CDS	86418263	86418804	.	+	1	Parent=FBgn0003464.1.mrna1;Target=FBgn0003464.1 222 763 +
Chr1	stalkie_big_nohaplotig	CDS	86427232	86428111	.	+	2	Parent=FBgn0003464.1.mrna1;Target=FBgn0003464.1 764 1643 +
Chr1	stalkie_big_nohaplotig	CDS	86428297	86428499	.	+	1	Parent=FBgn0003464.1.mrna1;Target=FBgn0003464.1 1644 1846 +
Chr1	stalkie_big_nohaplotig	CDS	86428584	86428853	.	+	2	Parent=FBgn0003464.1.mrna1;Target=FBgn0003464.1 1847 2116 +
Chr1	stalkie_big_nohaplotig	CDS	86428903	86430356	.	+	2	Parent=FBgn0003464.1.mrna1;Target=FBgn0003464.1 2117 3570 +
Chr1	stalkie_big_nohaplotig	CDS	86430414	86430620	.	+	0	Parent=FBgn0003464.1.mrna1;Target=FBgn0003464.1 3571 3777 +
Chr1	stalkie_big_nohaplotig	CDS	86436372	86436638	.	+	0	Parent=FBgn0003464.1.mrna1;Target=FBgn0003464.1 3778 4044 +
Chr1	stalkie_big_nohaplotig	CDS	86436698	86436840	.	+	0	Parent=FBgn0003464.1.mrna1;Target=FBgn0003464.1 4045 4187 +
Chr1	stalkie_big_nohaplotig	CDS	86436897	86437071	.	+	1	Parent=FBgn0003464.1.mrna1;Target=FBgn0003464.1 4188 4362 +
Chr1	stalkie_big_nohaplotig	mRNA	86430598	86431489	.	-	.	ID=comp135200_c0_seq1.mrna1;geneID=comp135200_c0_seq1.path1;Name=comp135200_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=891;mismatches=1;indels=0;unknowns=0;Target=comp135200_c0_seq1 892 1 .;CDS_Target=comp135200_c0_seq1 357 220 .;locus=RLOC_00009292
Chr1	stalkie_big_nohaplotig	exon	86430598	86431489	99	-	.	Parent=comp135200_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	86431133	86431270	.	-	0	Parent=comp135200_c0_seq1.mrna1
Chr1	gffcl	locus	86452518	86452992	.	+	.	ID=RLOC_00009293;geneIDs=comp100521_c0_seq1.path1;transcripts=comp100521_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86452518	86452992	.	+	.	ID=comp100521_c0_seq1.mrna1;geneID=comp100521_c0_seq1.path1;Name=comp100521_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=475;mismatches=0;indels=1;unknowns=0;Target=comp100521_c0_seq1 476 1 .;CDS_Target=comp100521_c0_seq1 121 38 .;locus=RLOC_00009293
Chr1	stalkie_big_nohaplotig	exon	86452518	86452992	99	+	.	Parent=comp100521_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	86452555	86452638	.	+	0	Parent=comp100521_c0_seq1.mrna1
Chr1	gffcl	locus	86467532	86490964	.	+	.	ID=RLOC_00009294;geneIDs=FBgn0025632.1.path1;transcripts=FBgn0025632.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86467532	86490964	.	+	.	ID=FBgn0025632.1.mrna1;geneID=FBgn0025632.1.path1;Name=FBgn0025632.1;Dir=sensecoverage=100.0;identity=100.0;matches=1485;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009294
Chr1	stalkie_big_nohaplotig	exon	86467532	86467615	100	+	.	Parent=FBgn0025632.1.mrna1;Target=FBgn0025632.1 1 84 +
Chr1	stalkie_big_nohaplotig	exon	86467793	86467960	100	+	.	Parent=FBgn0025632.1.mrna1;Target=FBgn0025632.1 85 252 +
Chr1	stalkie_big_nohaplotig	exon	86468014	86468167	100	+	.	Parent=FBgn0025632.1.mrna1;Target=FBgn0025632.1 253 406 +
Chr1	stalkie_big_nohaplotig	exon	86468225	86468309	100	+	.	Parent=FBgn0025632.1.mrna1;Target=FBgn0025632.1 407 491 +
Chr1	stalkie_big_nohaplotig	exon	86476476	86477004	100	+	.	Parent=FBgn0025632.1.mrna1;Target=FBgn0025632.1 492 1020 +
Chr1	stalkie_big_nohaplotig	exon	86490443	86490492	100	+	.	Parent=FBgn0025632.1.mrna1;Target=FBgn0025632.1 1021 1070 +
Chr1	stalkie_big_nohaplotig	exon	86490550	86490964	100	+	.	Parent=FBgn0025632.1.mrna1;Target=FBgn0025632.1 1071 1485 +
Chr1	stalkie_big_nohaplotig	CDS	86467532	86467615	.	+	0	Parent=FBgn0025632.1.mrna1;Target=FBgn0025632.1 1 84 +
Chr1	stalkie_big_nohaplotig	CDS	86467793	86467960	.	+	0	Parent=FBgn0025632.1.mrna1;Target=FBgn0025632.1 85 252 +
Chr1	stalkie_big_nohaplotig	CDS	86468014	86468167	.	+	0	Parent=FBgn0025632.1.mrna1;Target=FBgn0025632.1 253 406 +
Chr1	stalkie_big_nohaplotig	CDS	86468225	86468309	.	+	2	Parent=FBgn0025632.1.mrna1;Target=FBgn0025632.1 407 491 +
Chr1	stalkie_big_nohaplotig	CDS	86476476	86477004	.	+	1	Parent=FBgn0025632.1.mrna1;Target=FBgn0025632.1 492 1020 +
Chr1	stalkie_big_nohaplotig	CDS	86490443	86490492	.	+	0	Parent=FBgn0025632.1.mrna1;Target=FBgn0025632.1 1021 1070 +
Chr1	stalkie_big_nohaplotig	CDS	86490550	86490964	.	+	1	Parent=FBgn0025632.1.mrna1;Target=FBgn0025632.1 1071 1485 +
Chr1	gffcl	locus	86505121	86520259	.	+	.	ID=RLOC_00009295;geneIDs=FBgn0025631.1.path1;transcripts=FBgn0025631.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86505121	86520259	.	+	.	ID=FBgn0025631.1.mrna1;geneID=FBgn0025631.1.path1;Name=FBgn0025631.1;Dir=sensecoverage=100.0;identity=99.9;matches=1465;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009295
Chr1	stalkie_big_nohaplotig	exon	86505121	86505146	100	+	.	Parent=FBgn0025631.1.mrna1;Target=FBgn0025631.1 1 26 +
Chr1	stalkie_big_nohaplotig	exon	86514080	86514145	100	+	.	Parent=FBgn0025631.1.mrna1;Target=FBgn0025631.1 27 92 +
Chr1	stalkie_big_nohaplotig	exon	86518674	86518814	100	+	.	Parent=FBgn0025631.1.mrna1;Target=FBgn0025631.1 93 233 +
Chr1	stalkie_big_nohaplotig	exon	86518864	86519034	99	+	.	Parent=FBgn0025631.1.mrna1;Target=FBgn0025631.1 234 404 +
Chr1	stalkie_big_nohaplotig	exon	86519136	86519896	100	+	.	Parent=FBgn0025631.1.mrna1;Target=FBgn0025631.1 405 1165 +
Chr1	stalkie_big_nohaplotig	exon	86519958	86520259	99	+	.	Parent=FBgn0025631.1.mrna1;Target=FBgn0025631.1 1166 1467 +
Chr1	stalkie_big_nohaplotig	CDS	86505121	86505146	.	+	0	Parent=FBgn0025631.1.mrna1;Target=FBgn0025631.1 1 26 +
Chr1	stalkie_big_nohaplotig	CDS	86514080	86514145	.	+	1	Parent=FBgn0025631.1.mrna1;Target=FBgn0025631.1 27 92 +
Chr1	stalkie_big_nohaplotig	CDS	86518674	86518814	.	+	1	Parent=FBgn0025631.1.mrna1;Target=FBgn0025631.1 93 233 +
Chr1	stalkie_big_nohaplotig	CDS	86518864	86519034	.	+	1	Parent=FBgn0025631.1.mrna1;Target=FBgn0025631.1 234 404 +
Chr1	stalkie_big_nohaplotig	CDS	86519136	86519896	.	+	1	Parent=FBgn0025631.1.mrna1;Target=FBgn0025631.1 405 1165 +
Chr1	stalkie_big_nohaplotig	CDS	86519958	86520259	.	+	2	Parent=FBgn0025631.1.mrna1;Target=FBgn0025631.1 1166 1467 +
Chr1	gffcl	locus	86539103	86567752	.	-	.	ID=RLOC_00009296;geneIDs=FBgn0000667.1.path1;transcripts=FBgn0000667.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86539103	86567752	.	-	.	ID=FBgn0000667.1.mrna1;geneID=FBgn0000667.1.path1;Name=FBgn0000667.1;Dir=sensecoverage=100.0;identity=100.0;matches=2759;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009296
Chr1	stalkie_big_nohaplotig	exon	86539103	86539258	100	-	.	Parent=FBgn0000667.1.mrna1;Target=FBgn0000667.1 2605 2760 +
Chr1	stalkie_big_nohaplotig	exon	86539316	86540450	99	-	.	Parent=FBgn0000667.1.mrna1;Target=FBgn0000667.1 1470 2604 +
Chr1	stalkie_big_nohaplotig	exon	86541181	86541359	100	-	.	Parent=FBgn0000667.1.mrna1;Target=FBgn0000667.1 1291 1469 +
Chr1	stalkie_big_nohaplotig	exon	86541414	86541764	100	-	.	Parent=FBgn0000667.1.mrna1;Target=FBgn0000667.1 940 1290 +
Chr1	stalkie_big_nohaplotig	exon	86541879	86541971	100	-	.	Parent=FBgn0000667.1.mrna1;Target=FBgn0000667.1 847 939 +
Chr1	stalkie_big_nohaplotig	exon	86543874	86544022	100	-	.	Parent=FBgn0000667.1.mrna1;Target=FBgn0000667.1 698 846 +
Chr1	stalkie_big_nohaplotig	exon	86546166	86546319	100	-	.	Parent=FBgn0000667.1.mrna1;Target=FBgn0000667.1 544 697 +
Chr1	stalkie_big_nohaplotig	exon	86546399	86546815	100	-	.	Parent=FBgn0000667.1.mrna1;Target=FBgn0000667.1 127 543 +
Chr1	stalkie_big_nohaplotig	exon	86567627	86567752	100	-	.	Parent=FBgn0000667.1.mrna1;Target=FBgn0000667.1 1 126 +
Chr1	stalkie_big_nohaplotig	CDS	86539103	86539258	.	-	0	Parent=FBgn0000667.1.mrna1;Target=FBgn0000667.1 2605 2760 +
Chr1	stalkie_big_nohaplotig	CDS	86539316	86540450	.	-	1	Parent=FBgn0000667.1.mrna1;Target=FBgn0000667.1 1470 2604 +
Chr1	stalkie_big_nohaplotig	CDS	86541181	86541359	.	-	0	Parent=FBgn0000667.1.mrna1;Target=FBgn0000667.1 1291 1469 +
Chr1	stalkie_big_nohaplotig	CDS	86541414	86541764	.	-	0	Parent=FBgn0000667.1.mrna1;Target=FBgn0000667.1 940 1290 +
Chr1	stalkie_big_nohaplotig	CDS	86541879	86541971	.	-	0	Parent=FBgn0000667.1.mrna1;Target=FBgn0000667.1 847 939 +
Chr1	stalkie_big_nohaplotig	CDS	86543874	86544022	.	-	2	Parent=FBgn0000667.1.mrna1;Target=FBgn0000667.1 698 846 +
Chr1	stalkie_big_nohaplotig	CDS	86546166	86546319	.	-	0	Parent=FBgn0000667.1.mrna1;Target=FBgn0000667.1 544 697 +
Chr1	stalkie_big_nohaplotig	CDS	86546399	86546815	.	-	0	Parent=FBgn0000667.1.mrna1;Target=FBgn0000667.1 127 543 +
Chr1	stalkie_big_nohaplotig	CDS	86567627	86567752	.	-	0	Parent=FBgn0000667.1.mrna1;Target=FBgn0000667.1 1 126 +
Chr1	gffcl	locus	86544414	86545895	.	+	.	ID=RLOC_00009297;geneIDs=comp156197_c0_seq1.path1;transcripts=comp156197_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86544414	86545895	.	+	.	ID=comp156197_c0_seq1.mrna1;geneID=comp156197_c0_seq1.path1;Name=comp156197_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1481;mismatches=1;indels=0;unknowns=0;Target=comp156197_c0_seq1 1482 1 .;CDS_Target=comp156197_c0_seq1 416 195 .;locus=RLOC_00009297
Chr1	stalkie_big_nohaplotig	exon	86544414	86545895	99	+	.	Parent=comp156197_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	86544608	86544829	.	+	0	Parent=comp156197_c0_seq1.mrna1
Chr1	gffcl	locus	86567926	86568391	.	+	.	ID=RLOC_00009298;geneIDs=comp140552_c0_seq1.path1;transcripts=comp140552_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86567926	86568391	.	+	.	ID=comp140552_c0_seq1.mrna1;geneID=comp140552_c0_seq1.path1;Name=comp140552_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=466;mismatches=0;indels=0;unknowns=0;Target=comp140552_c0_seq1 466 1 .;CDS_Target=comp140552_c0_seq1 466 392 .;locus=RLOC_00009298
Chr1	stalkie_big_nohaplotig	exon	86567926	86568391	100	+	.	Parent=comp140552_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	86568317	86568391	.	+	0	Parent=comp140552_c0_seq1.mrna1
Chr1	gffcl	locus	86573373	86573576	.	-	.	ID=RLOC_00009299;geneIDs=comp153446_c1_seq1.path2;transcripts=comp153446_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	86573373	86573576	.	-	.	ID=comp153446_c1_seq1.mrna2;geneID=comp153446_c1_seq1.path2;Name=comp153446_c1_seq1;Dir=indeterminatecoverage=23.7;identity=82.4;matches=168;mismatches=30;indels=6;unknowns=0;Target=comp153446_c1_seq1 720 523 .;locus=RLOC_00009299
Chr1	stalkie_big_nohaplotig	exon	86573373	86573576	82	-	.	Parent=comp153446_c1_seq1.mrna2
Chr1	gffcl	locus	86581561	86582910	.	-	.	ID=RLOC_00009300;geneIDs=FBgn0003964.1.path1;transcripts=FBgn0003964.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86581561	86582910	.	-	.	ID=FBgn0003964.1.mrna1;geneID=FBgn0003964.1.path1;Name=FBgn0003964.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1350;mismatches=0;indels=0;unknowns=0;Target=FBgn0003964.1 1350 1 .;locus=RLOC_00009300
Chr1	stalkie_big_nohaplotig	exon	86581561	86582910	100	-	.	Parent=FBgn0003964.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	86581561	86582910	.	-	0	Parent=FBgn0003964.1.mrna1
Chr1	gffcl	locus	86637625	86639320	.	-	.	ID=RLOC_00009301;geneIDs=comp145985_c0_seq1.path1;transcripts=comp145985_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86637625	86639320	.	-	.	ID=comp145985_c0_seq1.mrna1;geneID=comp145985_c0_seq1.path1;Name=comp145985_c0_seq1;Dir=sensecoverage=99.9;identity=99.9;matches=1439;mismatches=1;indels=0;unknowns=0;Target=comp145985_c0_seq1 724 1053 +;locus=RLOC_00009301
Chr1	stalkie_big_nohaplotig	exon	86637625	86638369	100	-	.	Parent=comp145985_c0_seq1.mrna1;Target=comp145985_c0_seq1 697 1441 +
Chr1	stalkie_big_nohaplotig	exon	86638475	86638789	100	-	.	Parent=comp145985_c0_seq1.mrna1;Target=comp145985_c0_seq1 382 696 +
Chr1	stalkie_big_nohaplotig	exon	86638941	86639320	99	-	.	Parent=comp145985_c0_seq1.mrna1;Target=comp145985_c0_seq1 2 381 +
Chr1	stalkie_big_nohaplotig	CDS	86638013	86638342	.	-	0	Parent=comp145985_c0_seq1.mrna1
Chr1	gffcl	locus	86682195	86684685	.	-	.	ID=RLOC_00009302;geneIDs=comp149665_c0_seq1.path1;transcripts=comp149665_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86682195	86684685	.	-	.	ID=comp149665_c0_seq1.mrna1;geneID=comp149665_c0_seq1.path1;Name=comp149665_c0_seq1;Dir=antisensecoverage=98.1;identity=98.4;matches=718;mismatches=5;indels=7;unknowns=0;Target=comp149665_c0_seq1 389 637 .;locus=RLOC_00009302
Chr1	stalkie_big_nohaplotig	exon	86682195	86682581	99	-	.	Parent=comp149665_c0_seq1.mrna1;Target=comp149665_c0_seq1 1 387 -
Chr1	stalkie_big_nohaplotig	exon	86684350	86684685	97	-	.	Parent=comp149665_c0_seq1.mrna1;Target=comp149665_c0_seq1 388 730 -
Chr1	stalkie_big_nohaplotig	CDS	86684351	86684599	.	-	0	Parent=comp149665_c0_seq1.mrna1
Chr1	gffcl	locus	86701947	86715716	.	-	.	ID=RLOC_00009303;geneIDs=FBgn0024184.1.path1;transcripts=FBgn0024184.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86701947	86715716	.	-	.	ID=FBgn0024184.1.mrna1;geneID=FBgn0024184.1.path1;Name=FBgn0024184.1;Dir=sensecoverage=100.0;identity=99.9;matches=1347;mismatches=0;indels=1;unknowns=0;locus=RLOC_00009303
Chr1	stalkie_big_nohaplotig	exon	86701947	86702454	100	-	.	Parent=FBgn0024184.1.mrna1;Target=FBgn0024184.1 840 1347 +
Chr1	stalkie_big_nohaplotig	exon	86703382	86703525	99	-	.	Parent=FBgn0024184.1.mrna1;Target=FBgn0024184.1 697 839 +
Chr1	stalkie_big_nohaplotig	exon	86704304	86704482	100	-	.	Parent=FBgn0024184.1.mrna1;Target=FBgn0024184.1 518 696 +
Chr1	stalkie_big_nohaplotig	exon	86715200	86715716	100	-	.	Parent=FBgn0024184.1.mrna1;Target=FBgn0024184.1 1 517 +
Chr1	stalkie_big_nohaplotig	CDS	86701947	86702454	.	-	0	Parent=FBgn0024184.1.mrna1;Target=FBgn0024184.1 840 1347 +
Chr1	stalkie_big_nohaplotig	CDS	86703382	86703525	.	-	0	Parent=FBgn0024184.1.mrna1;Target=FBgn0024184.1 697 839 +
Chr1	stalkie_big_nohaplotig	CDS	86704304	86704482	.	-	2	Parent=FBgn0024184.1.mrna1;Target=FBgn0024184.1 518 696 +
Chr1	stalkie_big_nohaplotig	CDS	86715200	86715716	.	-	0	Parent=FBgn0024184.1.mrna1;Target=FBgn0024184.1 1 517 +
Chr1	gffcl	locus	86738227	86738773	.	+	.	ID=RLOC_00009304;geneIDs=comp145701_c0_seq1.path1;transcripts=comp145701_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86738227	86738773	.	+	.	ID=comp145701_c0_seq1.mrna1;geneID=comp145701_c0_seq1.path1;Name=comp145701_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=533;mismatches=14;indels=0;unknowns=0;Target=comp145701_c0_seq1 547 1 .;CDS_Target=comp145701_c0_seq1 101 3 .;locus=RLOC_00009304
Chr1	stalkie_big_nohaplotig	exon	86738227	86738773	97	+	.	Parent=comp145701_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	86738229	86738327	.	+	0	Parent=comp145701_c0_seq1.mrna1
Chr1	gffcl	locus	86760175	86760580	.	-	.	ID=RLOC_00009305;geneIDs=comp145337_c0_seq1.path1;transcripts=comp145337_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86760175	86760580	.	-	.	ID=comp145337_c0_seq1.mrna1;geneID=comp145337_c0_seq1.path1;Name=comp145337_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=406;mismatches=0;indels=0;unknowns=0;Target=comp145337_c0_seq1 406 1 .;CDS_Target=comp145337_c0_seq1 70 2 .;locus=RLOC_00009305
Chr1	stalkie_big_nohaplotig	exon	86760175	86760580	100	-	.	Parent=comp145337_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	86760511	86760579	.	-	0	Parent=comp145337_c0_seq1.mrna1
Chr1	gffcl	locus	86768079	86769686	.	+	.	ID=RLOC_00009307;geneIDs=FBgn0025463.1.path1;transcripts=FBgn0025463.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86768079	86769686	.	+	.	ID=FBgn0025463.1.mrna1;geneID=FBgn0025463.1.path1;Name=FBgn0025463.1;Dir=sensecoverage=100.0;identity=99.9;matches=1495;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009307
Chr1	stalkie_big_nohaplotig	exon	86768079	86768195	100	+	.	Parent=FBgn0025463.1.mrna1;Target=FBgn0025463.1 1 117 +
Chr1	stalkie_big_nohaplotig	exon	86768253	86769479	99	+	.	Parent=FBgn0025463.1.mrna1;Target=FBgn0025463.1 118 1344 +
Chr1	stalkie_big_nohaplotig	exon	86769534	86769686	99	+	.	Parent=FBgn0025463.1.mrna1;Target=FBgn0025463.1 1345 1497 +
Chr1	stalkie_big_nohaplotig	CDS	86768079	86768195	.	+	0	Parent=FBgn0025463.1.mrna1;Target=FBgn0025463.1 1 117 +
Chr1	stalkie_big_nohaplotig	CDS	86768253	86769479	.	+	0	Parent=FBgn0025463.1.mrna1;Target=FBgn0025463.1 118 1344 +
Chr1	stalkie_big_nohaplotig	CDS	86769534	86769686	.	+	0	Parent=FBgn0025463.1.mrna1;Target=FBgn0025463.1 1345 1497 +
Chr1	gffcl	locus	86792530	86793009	.	+	.	ID=RLOC_00009309;geneIDs=FBgn0033680.1.path1;transcripts=FBgn0033680.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86792530	86793009	.	+	.	ID=FBgn0033680.1.mrna1;geneID=FBgn0033680.1.path1;Name=FBgn0033680.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=478;mismatches=2;indels=0;unknowns=0;Target=FBgn0033680.1 480 1 .;locus=RLOC_00009309
Chr1	stalkie_big_nohaplotig	exon	86792530	86793009	99	+	.	Parent=FBgn0033680.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	86792530	86793009	.	+	0	Parent=FBgn0033680.1.mrna1
Chr1	gffcl	locus	86793168	86794576	.	-	.	ID=RLOC_00009310;geneIDs=FBgn0031771.3.path1;transcripts=FBgn0031771.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86793168	86794576	.	-	.	ID=FBgn0031771.3.mrna1;geneID=FBgn0031771.3.path1;Name=FBgn0031771.3;Dir=indeterminatecoverage=99.1;identity=100.0;matches=1409;mismatches=0;indels=0;unknowns=0;Target=FBgn0031771.3 1422 14 .;CDS_Target=FBgn0031771.3 1422 16 .;locus=RLOC_00009310
Chr1	stalkie_big_nohaplotig	exon	86793168	86794576	100	-	.	Parent=FBgn0031771.3.mrna1
Chr1	stalkie_big_nohaplotig	CDS	86793168	86794574	.	-	0	Parent=FBgn0031771.3.mrna1
Chr1	gffcl	locus	86879378	86903488	.	-	.	ID=RLOC_00009311;geneIDs=FBgn0003423.1.path1,comp129573_c0_seq1.path1;transcripts=FBgn0003423.1.mrna1,comp129573_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86879378	86903488	.	-	.	ID=FBgn0003423.1.mrna1;geneID=FBgn0003423.1.path1;Name=FBgn0003423.1;Dir=sensecoverage=100.0;identity=100.0;matches=2160;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009311
Chr1	stalkie_big_nohaplotig	exon	86879378	86879580	100	-	.	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 1958 2160 +
Chr1	stalkie_big_nohaplotig	exon	86879673	86879850	100	-	.	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 1780 1957 +
Chr1	stalkie_big_nohaplotig	exon	86879905	86880096	100	-	.	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 1588 1779 +
Chr1	stalkie_big_nohaplotig	exon	86880164	86880325	100	-	.	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 1426 1587 +
Chr1	stalkie_big_nohaplotig	exon	86880459	86880633	100	-	.	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 1251 1425 +
Chr1	stalkie_big_nohaplotig	exon	86880709	86880887	100	-	.	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 1072 1250 +
Chr1	stalkie_big_nohaplotig	exon	86880942	86881006	100	-	.	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 1007 1071 +
Chr1	stalkie_big_nohaplotig	exon	86881112	86881150	100	-	.	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 968 1006 +
Chr1	stalkie_big_nohaplotig	exon	86892574	86892755	100	-	.	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 786 967 +
Chr1	stalkie_big_nohaplotig	exon	86892830	86892916	100	-	.	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 699 785 +
Chr1	stalkie_big_nohaplotig	exon	86894591	86894712	100	-	.	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 577 698 +
Chr1	stalkie_big_nohaplotig	exon	86902913	86903488	100	-	.	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 1 576 +
Chr1	stalkie_big_nohaplotig	CDS	86879378	86879580	.	-	2	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 1958 2160 +
Chr1	stalkie_big_nohaplotig	CDS	86879673	86879850	.	-	0	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 1780 1957 +
Chr1	stalkie_big_nohaplotig	CDS	86879905	86880096	.	-	0	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 1588 1779 +
Chr1	stalkie_big_nohaplotig	CDS	86880164	86880325	.	-	0	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 1426 1587 +
Chr1	stalkie_big_nohaplotig	CDS	86880459	86880633	.	-	1	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 1251 1425 +
Chr1	stalkie_big_nohaplotig	CDS	86880709	86880887	.	-	0	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 1072 1250 +
Chr1	stalkie_big_nohaplotig	CDS	86880942	86881006	.	-	2	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 1007 1071 +
Chr1	stalkie_big_nohaplotig	CDS	86881112	86881150	.	-	2	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 968 1006 +
Chr1	stalkie_big_nohaplotig	CDS	86892574	86892755	.	-	1	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 786 967 +
Chr1	stalkie_big_nohaplotig	CDS	86892830	86892916	.	-	1	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 699 785 +
Chr1	stalkie_big_nohaplotig	CDS	86894591	86894712	.	-	0	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 577 698 +
Chr1	stalkie_big_nohaplotig	CDS	86902913	86903488	.	-	0	Parent=FBgn0003423.1.mrna1;Target=FBgn0003423.1 1 576 +
Chr1	stalkie_big_nohaplotig	mRNA	86894215	86894613	.	-	.	ID=comp129573_c0_seq1.mrna1;geneID=comp129573_c0_seq1.path1;Name=comp129573_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=398;mismatches=1;indels=4;unknowns=0;Target=comp129573_c0_seq1 403 1 .;CDS_Target=comp129573_c0_seq1 281 156 .;locus=RLOC_00009311
Chr1	stalkie_big_nohaplotig	exon	86894215	86894613	98	-	.	Parent=comp129573_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	86894337	86894462	.	-	0	Parent=comp129573_c0_seq1.mrna1
Chr1	gffcl	locus	86893016	86893733	.	-	.	ID=RLOC_00009312;geneIDs=comp117824_c0_seq1.path1;transcripts=comp117824_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86893016	86893733	.	-	.	ID=comp117824_c0_seq1.mrna1;geneID=comp117824_c0_seq1.path1;Name=comp117824_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=718;mismatches=0;indels=0;unknowns=0;Target=comp117824_c0_seq1 718 1 .;CDS_Target=comp117824_c0_seq1 557 330 .;locus=RLOC_00009312
Chr1	stalkie_big_nohaplotig	exon	86893016	86893733	100	-	.	Parent=comp117824_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	86893177	86893404	.	-	0	Parent=comp117824_c0_seq1.mrna1
Chr1	gffcl	locus	86917789	86924742	.	-	.	ID=RLOC_00009313;geneIDs=FBgn0024251.1.path1;transcripts=FBgn0024251.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86917789	86924742	.	-	.	ID=FBgn0024251.1.mrna1;geneID=FBgn0024251.1.path1;Name=FBgn0024251.1;Dir=sensecoverage=100.0;identity=100.0;matches=2139;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009313
Chr1	stalkie_big_nohaplotig	exon	86917789	86918865	100	-	.	Parent=FBgn0024251.1.mrna1;Target=FBgn0024251.1 1063 2139 +
Chr1	stalkie_big_nohaplotig	exon	86923586	86923667	100	-	.	Parent=FBgn0024251.1.mrna1;Target=FBgn0024251.1 981 1062 +
Chr1	stalkie_big_nohaplotig	exon	86923763	86924742	100	-	.	Parent=FBgn0024251.1.mrna1;Target=FBgn0024251.1 1 980 +
Chr1	stalkie_big_nohaplotig	CDS	86917789	86918865	.	-	0	Parent=FBgn0024251.1.mrna1;Target=FBgn0024251.1 1063 2139 +
Chr1	stalkie_big_nohaplotig	CDS	86923586	86923667	.	-	1	Parent=FBgn0024251.1.mrna1;Target=FBgn0024251.1 981 1062 +
Chr1	stalkie_big_nohaplotig	CDS	86923763	86924742	.	-	0	Parent=FBgn0024251.1.mrna1;Target=FBgn0024251.1 1 980 +
Chr1	gffcl	locus	86932143	86934544	.	-	.	ID=RLOC_00009314;geneIDs=FBgn0024182.1.path1;transcripts=FBgn0024182.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86932143	86934544	.	-	.	ID=FBgn0024182.1.mrna1;geneID=FBgn0024182.1.path1;Name=FBgn0024182.1;Dir=sensecoverage=100.0;identity=100.0;matches=2070;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009314
Chr1	stalkie_big_nohaplotig	exon	86932143	86932265	100	-	.	Parent=FBgn0024182.1.mrna1;Target=FBgn0024182.1 1948 2070 +
Chr1	stalkie_big_nohaplotig	exon	86932323	86932768	100	-	.	Parent=FBgn0024182.1.mrna1;Target=FBgn0024182.1 1502 1947 +
Chr1	stalkie_big_nohaplotig	exon	86932823	86933310	100	-	.	Parent=FBgn0024182.1.mrna1;Target=FBgn0024182.1 1014 1501 +
Chr1	stalkie_big_nohaplotig	exon	86933363	86933631	100	-	.	Parent=FBgn0024182.1.mrna1;Target=FBgn0024182.1 745 1013 +
Chr1	stalkie_big_nohaplotig	exon	86933693	86933911	100	-	.	Parent=FBgn0024182.1.mrna1;Target=FBgn0024182.1 526 744 +
Chr1	stalkie_big_nohaplotig	exon	86933967	86934315	100	-	.	Parent=FBgn0024182.1.mrna1;Target=FBgn0024182.1 177 525 +
Chr1	stalkie_big_nohaplotig	exon	86934369	86934544	100	-	.	Parent=FBgn0024182.1.mrna1;Target=FBgn0024182.1 1 176 +
Chr1	stalkie_big_nohaplotig	CDS	86932143	86932265	.	-	0	Parent=FBgn0024182.1.mrna1;Target=FBgn0024182.1 1948 2070 +
Chr1	stalkie_big_nohaplotig	CDS	86932323	86932768	.	-	2	Parent=FBgn0024182.1.mrna1;Target=FBgn0024182.1 1502 1947 +
Chr1	stalkie_big_nohaplotig	CDS	86932823	86933310	.	-	1	Parent=FBgn0024182.1.mrna1;Target=FBgn0024182.1 1014 1501 +
Chr1	stalkie_big_nohaplotig	CDS	86933363	86933631	.	-	0	Parent=FBgn0024182.1.mrna1;Target=FBgn0024182.1 745 1013 +
Chr1	stalkie_big_nohaplotig	CDS	86933693	86933911	.	-	0	Parent=FBgn0024182.1.mrna1;Target=FBgn0024182.1 526 744 +
Chr1	stalkie_big_nohaplotig	CDS	86933967	86934315	.	-	1	Parent=FBgn0024182.1.mrna1;Target=FBgn0024182.1 177 525 +
Chr1	stalkie_big_nohaplotig	CDS	86934369	86934544	.	-	0	Parent=FBgn0024182.1.mrna1;Target=FBgn0024182.1 1 176 +
Chr1	gffcl	locus	86943471	86944245	.	-	.	ID=RLOC_00009315;geneIDs=comp150722_c1_seq1.path1;transcripts=comp150722_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86943471	86944245	.	-	.	ID=comp150722_c1_seq1.mrna1;geneID=comp150722_c1_seq1.path1;Name=comp150722_c1_seq1;Dir=indeterminatecoverage=95.3;identity=91.1;matches=724;mismatches=48;indels=23;unknowns=0;Target=comp150722_c1_seq1 792 1 .;CDS_Target=comp150722_c1_seq1 757 608 .;locus=RLOC_00009315
Chr1	stalkie_big_nohaplotig	exon	86943471	86944245	91	-	.	Parent=comp150722_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	86943506	86943655	.	-	0	Parent=comp150722_c1_seq1.mrna1
Chr1	gffcl	locus	86953341	87503228	.	+	.	ID=RLOC_00009317;geneIDs=comp146006_c0_seq1.path1;transcripts=comp146006_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	86953341	87503228	.	+	.	ID=comp146006_c0_seq1.mrna1;geneID=comp146006_c0_seq1.path1;Name=comp146006_c0_seq1;Dir=indeterminatecoverage=91.8;identity=99.6;matches=533;mismatches=2;indels=0;unknowns=0;Target=comp146006_c0_seq1 404 246 .;locus=RLOC_00009317
Chr1	stalkie_big_nohaplotig	exon	86953341	86953840	99	+	.	Parent=comp146006_c0_seq1.mrna1;Target=comp146006_c0_seq1 516 17 .
Chr1	stalkie_big_nohaplotig	exon	87490603	87490609	100	+	.	Parent=comp146006_c0_seq1.mrna1;Target=comp146006_c0_seq1 523 517 .
Chr1	stalkie_big_nohaplotig	exon	87493764	87493769	100	+	.	Parent=comp146006_c0_seq1.mrna1;Target=comp146006_c0_seq1 529 524 .
Chr1	stalkie_big_nohaplotig	exon	87498410	87498418	100	+	.	Parent=comp146006_c0_seq1.mrna1;Target=comp146006_c0_seq1 538 530 .
Chr1	stalkie_big_nohaplotig	exon	87503216	87503228	100	+	.	Parent=comp146006_c0_seq1.mrna1;Target=comp146006_c0_seq1 551 539 .
Chr1	stalkie_big_nohaplotig	CDS	86953570	86953728	.	+	0	Parent=comp146006_c0_seq1.mrna1
Chr1	gffcl	locus	87091748	87092609	.	-	.	ID=RLOC_00009318;geneIDs=comp152749_c0_seq1.path1;transcripts=comp152749_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87091748	87092609	.	-	.	ID=comp152749_c0_seq1.mrna1;geneID=comp152749_c0_seq1.path1;Name=comp152749_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=849;mismatches=13;indels=1;unknowns=0;Target=comp152749_c0_seq1 863 1 .;CDS_Target=comp152749_c0_seq1 780 679 .;locus=RLOC_00009318
Chr1	stalkie_big_nohaplotig	exon	87091748	87092609	98	-	.	Parent=comp152749_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	87091831	87091932	.	-	0	Parent=comp152749_c0_seq1.mrna1
Chr1	gffcl	locus	87092879	87093180	.	+	.	ID=RLOC_00009319;geneIDs=comp146095_c0_seq1.path1;transcripts=comp146095_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87092879	87093180	.	+	.	ID=comp146095_c0_seq1.mrna1;geneID=comp146095_c0_seq1.path1;Name=comp146095_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.0;matches=299;mismatches=3;indels=0;unknowns=0;Target=comp146095_c0_seq1 307 6 .;CDS_Target=comp146095_c0_seq1 57 7 .;locus=RLOC_00009319
Chr1	stalkie_big_nohaplotig	exon	87092879	87093180	99	+	.	Parent=comp146095_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	87092880	87092930	.	+	0	Parent=comp146095_c0_seq1.mrna1
Chr1	gffcl	locus	87118930	87120692	.	+	.	ID=RLOC_00009320;geneIDs=comp139572_c0_seq1.path1;transcripts=comp139572_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87118930	87120692	.	+	.	ID=comp139572_c0_seq1.mrna1;geneID=comp139572_c0_seq1.path1;Name=comp139572_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.7;matches=1724;mismatches=13;indels=45;unknowns=0;Target=comp139572_c0_seq1 977 663 .;locus=RLOC_00009320
Chr1	stalkie_big_nohaplotig	exon	87118930	87119984	97	+	.	Parent=comp139572_c0_seq1.mrna1;Target=comp139572_c0_seq1 1075 1 .
Chr1	stalkie_big_nohaplotig	exon	87119987	87120692	95	+	.	Parent=comp139572_c0_seq1.mrna1;Target=comp139572_c0_seq1 1965 1283 .
Chr1	stalkie_big_nohaplotig	CDS	87119593	87119907	.	+	0	Parent=comp139572_c0_seq1.mrna1
Chr1	gffcl	locus	87210413	87212258	.	+	.	ID=RLOC_00009321;geneIDs=FBgn0023541.1.path1;transcripts=FBgn0023541.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87210413	87212258	.	+	.	ID=FBgn0023541.1.mrna1;geneID=FBgn0023541.1.path1;Name=FBgn0023541.1;Dir=sensecoverage=100.0;identity=95.4;matches=1466;mismatches=70;indels=0;unknowns=0;locus=RLOC_00009321
Chr1	stalkie_big_nohaplotig	exon	87210413	87210596	96	+	.	Parent=FBgn0023541.1.mrna1;Target=FBgn0023541.1 1 184 +
Chr1	stalkie_big_nohaplotig	exon	87210656	87211112	91	+	.	Parent=FBgn0023541.1.mrna1;Target=FBgn0023541.1 185 641 +
Chr1	stalkie_big_nohaplotig	exon	87211175	87211371	99	+	.	Parent=FBgn0023541.1.mrna1;Target=FBgn0023541.1 642 838 +
Chr1	stalkie_big_nohaplotig	exon	87211482	87211850	96	+	.	Parent=FBgn0023541.1.mrna1;Target=FBgn0023541.1 839 1207 +
Chr1	stalkie_big_nohaplotig	exon	87211930	87212258	96	+	.	Parent=FBgn0023541.1.mrna1;Target=FBgn0023541.1 1208 1536 +
Chr1	stalkie_big_nohaplotig	CDS	87210434	87210596	.	+	0	Parent=FBgn0023541.1.mrna1;Target=FBgn0023541.1 22 184 +
Chr1	stalkie_big_nohaplotig	CDS	87210656	87211112	.	+	2	Parent=FBgn0023541.1.mrna1;Target=FBgn0023541.1 185 641 +
Chr1	stalkie_big_nohaplotig	CDS	87211175	87211371	.	+	1	Parent=FBgn0023541.1.mrna1;Target=FBgn0023541.1 642 838 +
Chr1	stalkie_big_nohaplotig	CDS	87211482	87211850	.	+	2	Parent=FBgn0023541.1.mrna1;Target=FBgn0023541.1 839 1207 +
Chr1	stalkie_big_nohaplotig	CDS	87211930	87212258	.	+	2	Parent=FBgn0023541.1.mrna1;Target=FBgn0023541.1 1208 1536 +
Chr1	gffcl	locus	87213188	87213535	.	+	.	ID=RLOC_00009322;geneIDs=comp118367_c0_seq1.path1;transcripts=comp118367_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87213188	87213535	.	+	.	ID=comp118367_c0_seq1.mrna1;geneID=comp118367_c0_seq1.path1;Name=comp118367_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=297;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009322
Chr1	stalkie_big_nohaplotig	exon	87213188	87213386	100	+	.	Parent=comp118367_c0_seq1.mrna1;Target=comp118367_c0_seq1 1 199 +
Chr1	stalkie_big_nohaplotig	exon	87213438	87213535	100	+	.	Parent=comp118367_c0_seq1.mrna1;Target=comp118367_c0_seq1 200 297 +
Chr1	stalkie_big_nohaplotig	CDS	87213224	87213386	.	+	0	Parent=comp118367_c0_seq1.mrna1;Target=comp118367_c0_seq1 37 199 +
Chr1	stalkie_big_nohaplotig	CDS	87213438	87213535	.	+	2	Parent=comp118367_c0_seq1.mrna1;Target=comp118367_c0_seq1 200 297 +
Chr1	gffcl	locus	87226322	87227181	.	+	.	ID=RLOC_00009323;geneIDs=FBgn0035510.1.path1;transcripts=FBgn0035510.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87226322	87227181	.	+	.	ID=FBgn0035510.1.mrna1;geneID=FBgn0035510.1.path1;Name=FBgn0035510.1;Dir=sensecoverage=100.0;identity=97.1;matches=699;mismatches=6;indels=15;unknowns=0;locus=RLOC_00009323
Chr1	stalkie_big_nohaplotig	exon	87226322	87226357	100	+	.	Parent=FBgn0035510.1.mrna1;Target=FBgn0035510.1 1 36 +
Chr1	stalkie_big_nohaplotig	exon	87226430	87226690	98	+	.	Parent=FBgn0035510.1.mrna1;Target=FBgn0035510.1 37 297 +
Chr1	stalkie_big_nohaplotig	exon	87226774	87227181	96	+	.	Parent=FBgn0035510.1.mrna1;Target=FBgn0035510.1 298 720 +
Chr1	stalkie_big_nohaplotig	CDS	87226322	87226357	.	+	0	Parent=FBgn0035510.1.mrna1;Target=FBgn0035510.1 1 36 +
Chr1	stalkie_big_nohaplotig	CDS	87226430	87226690	.	+	0	Parent=FBgn0035510.1.mrna1;Target=FBgn0035510.1 37 297 +
Chr1	stalkie_big_nohaplotig	CDS	87226774	87227181	.	+	0	Parent=FBgn0035510.1.mrna1;Target=FBgn0035510.1 298 720 +
Chr1	gffcl	locus	87260858	87261205	.	-	.	ID=RLOC_00009324;geneIDs=comp118367_c0_seq1.path2;transcripts=comp118367_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	87260858	87261205	.	-	.	ID=comp118367_c0_seq1.mrna2;geneID=comp118367_c0_seq1.path2;Name=comp118367_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=296;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009324
Chr1	stalkie_big_nohaplotig	exon	87260858	87260955	98	-	.	Parent=comp118367_c0_seq1.mrna2;Target=comp118367_c0_seq1 200 297 +
Chr1	stalkie_big_nohaplotig	exon	87261007	87261205	100	-	.	Parent=comp118367_c0_seq1.mrna2;Target=comp118367_c0_seq1 1 199 +
Chr1	stalkie_big_nohaplotig	CDS	87260858	87260955	.	-	2	Parent=comp118367_c0_seq1.mrna2;Target=comp118367_c0_seq1 200 297 +
Chr1	stalkie_big_nohaplotig	CDS	87261007	87261169	.	-	0	Parent=comp118367_c0_seq1.mrna2;Target=comp118367_c0_seq1 37 199 +
Chr1	gffcl	locus	87261730	87263570	.	-	.	ID=RLOC_00009325;geneIDs=comp163157_c1_seq1.path1;transcripts=comp163157_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87261730	87263570	.	-	.	ID=comp163157_c1_seq1.mrna1;geneID=comp163157_c1_seq1.path1;Name=comp163157_c1_seq1;Dir=antisensecoverage=83.9;identity=96.0;matches=1527;mismatches=63;indels=0;unknowns=0;locus=RLOC_00009325
Chr1	stalkie_big_nohaplotig	exon	87261730	87262312	99	-	.	Parent=comp163157_c1_seq1.mrna1;Target=comp163157_c1_seq1 7 589 -
Chr1	stalkie_big_nohaplotig	exon	87262392	87262760	96	-	.	Parent=comp163157_c1_seq1.mrna1;Target=comp163157_c1_seq1 590 958 -
Chr1	stalkie_big_nohaplotig	exon	87262871	87263067	98	-	.	Parent=comp163157_c1_seq1.mrna1;Target=comp163157_c1_seq1 959 1155 -
Chr1	stalkie_big_nohaplotig	exon	87263130	87263570	90	-	.	Parent=comp163157_c1_seq1.mrna1;Target=comp163157_c1_seq1 1156 1596 -
Chr1	stalkie_big_nohaplotig	CDS	87261981	87262312	.	-	2	Parent=comp163157_c1_seq1.mrna1;Target=comp163157_c1_seq1 258 589 .
Chr1	stalkie_big_nohaplotig	CDS	87262392	87262760	.	-	2	Parent=comp163157_c1_seq1.mrna1;Target=comp163157_c1_seq1 590 958 .
Chr1	stalkie_big_nohaplotig	CDS	87262871	87263067	.	-	1	Parent=comp163157_c1_seq1.mrna1;Target=comp163157_c1_seq1 959 1155 .
Chr1	stalkie_big_nohaplotig	CDS	87263130	87263569	.	-	0	Parent=comp163157_c1_seq1.mrna1;Target=comp163157_c1_seq1 1156 1595 .
Chr1	gffcl	locus	87277918	87278656	.	+	.	ID=RLOC_00009326;geneIDs=comp71259_c0_seq1.path1;transcripts=comp71259_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87277918	87278656	.	+	.	ID=comp71259_c0_seq1.mrna1;geneID=comp71259_c0_seq1.path1;Name=comp71259_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.4;matches=733;mismatches=6;indels=6;unknowns=0;Target=comp71259_c0_seq1 745 1 .;CDS_Target=comp71259_c0_seq1 372 280 .;locus=RLOC_00009326
Chr1	stalkie_big_nohaplotig	exon	87277918	87278656	98	+	.	Parent=comp71259_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	87278197	87278283	.	+	0	Parent=comp71259_c0_seq1.mrna1
Chr1	gffcl	locus	87290533	87291915	.	+	.	ID=RLOC_00009327;geneIDs=comp148089_c0_seq1.path1;transcripts=comp148089_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87290533	87291915	.	+	.	ID=comp148089_c0_seq1.mrna1;geneID=comp148089_c0_seq1.path1;Name=comp148089_c0_seq1;Dir=antisensecoverage=83.4;identity=97.5;matches=1247;mismatches=12;indels=20;unknowns=0;Target=comp148089_c0_seq1 1047 1343 .;locus=RLOC_00009327
Chr1	stalkie_big_nohaplotig	exon	87290533	87291249	98	+	.	Parent=comp148089_c0_seq1.mrna1;Target=comp148089_c0_seq1 805 1515 -
Chr1	stalkie_big_nohaplotig	exon	87291360	87291915	96	+	.	Parent=comp148089_c0_seq1.mrna1;Target=comp148089_c0_seq1 251 804 -
Chr1	stalkie_big_nohaplotig	CDS	87290705	87291007	.	+	0	Parent=comp148089_c0_seq1.mrna1
Chr1	gffcl	locus	87292124	87292358	.	-	.	ID=RLOC_00009328;geneIDs=comp117551_c0_seq1.path1;transcripts=comp117551_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87292124	87292358	.	-	.	ID=comp117551_c0_seq1.mrna1;geneID=comp117551_c0_seq1.path1;Name=comp117551_c0_seq1;Dir=indeterminatecoverage=99.2;identity=98.3;matches=231;mismatches=4;indels=0;unknowns=0;Target=comp117551_c0_seq1 235 1 .;CDS_Target=comp117551_c0_seq1 64 2 .;locus=RLOC_00009328
Chr1	stalkie_big_nohaplotig	exon	87292124	87292358	98	-	.	Parent=comp117551_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	87292295	87292357	.	-	0	Parent=comp117551_c0_seq1.mrna1
Chr1	gffcl	locus	87358479	87359494	.	-	.	ID=RLOC_00009329;geneIDs=comp143160_c0_seq1.path1;transcripts=comp143160_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87358479	87359494	.	-	.	ID=comp143160_c0_seq1.mrna1;geneID=comp143160_c0_seq1.path1;Name=comp143160_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1015;mismatches=1;indels=0;unknowns=0;Target=comp143160_c0_seq1 1016 1 .;CDS_Target=comp143160_c0_seq1 576 436 .;locus=RLOC_00009329
Chr1	stalkie_big_nohaplotig	exon	87358479	87359494	99	-	.	Parent=comp143160_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	87358919	87359059	.	-	0	Parent=comp143160_c0_seq1.mrna1
Chr1	gffcl	locus	87359540	87360634	.	-	.	ID=RLOC_00009330;geneIDs=comp157745_c0_seq1.path1;transcripts=comp157745_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87359540	87360634	.	-	.	ID=comp157745_c0_seq1.mrna1;geneID=comp157745_c0_seq1.path1;Name=comp157745_c0_seq1;Dir=indeterminatecoverage=95.5;identity=97.2;matches=1092;mismatches=3;indels=29;unknowns=0;Target=comp157745_c0_seq1 1124 1 .;CDS_Target=comp157745_c0_seq1 506 372 .;locus=RLOC_00009330
Chr1	stalkie_big_nohaplotig	exon	87359540	87360634	97	-	.	Parent=comp157745_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	87360157	87360291	.	-	0	Parent=comp157745_c0_seq1.mrna1
Chr1	gffcl	locus	87399986	87400703	.	-	.	ID=RLOC_00009331;geneIDs=comp50844_c0_seq1.path1;transcripts=comp50844_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87399986	87400703	.	-	.	ID=comp50844_c0_seq1.mrna1;geneID=comp50844_c0_seq1.path1;Name=comp50844_c0_seq1;Dir=sensecoverage=99.7;identity=94.8;matches=607;mismatches=12;indels=21;unknowns=0;locus=RLOC_00009331
Chr1	stalkie_big_nohaplotig	exon	87399986	87400522	97	-	.	Parent=comp50844_c0_seq1.mrna1;Target=comp50844_c0_seq1 105 637 +
Chr1	stalkie_big_nohaplotig	exon	87400618	87400703	81	-	.	Parent=comp50844_c0_seq1.mrna1;Target=comp50844_c0_seq1 2 104 +
Chr1	stalkie_big_nohaplotig	CDS	87400275	87400522	.	-	2	Parent=comp50844_c0_seq1.mrna1;Target=comp50844_c0_seq1 105 352 +
Chr1	stalkie_big_nohaplotig	CDS	87400618	87400621	.	-	0	Parent=comp50844_c0_seq1.mrna1;Target=comp50844_c0_seq1 101 104 +
Chr1	gffcl	locus	87419020	87428734	.	-	.	ID=RLOC_00009332;geneIDs=FBgn0005427.1.path1;transcripts=FBgn0005427.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87419020	87428734	.	-	.	ID=FBgn0005427.1.mrna1;geneID=FBgn0005427.1.path1;Name=FBgn0005427.1;Dir=sensecoverage=100.0;identity=99.6;matches=1656;mismatches=6;indels=0;unknowns=0;locus=RLOC_00009332
Chr1	stalkie_big_nohaplotig	exon	87419020	87419214	99	-	.	Parent=FBgn0005427.1.mrna1;Target=FBgn0005427.1 1468 1662 +
Chr1	stalkie_big_nohaplotig	exon	87423238	87423365	100	-	.	Parent=FBgn0005427.1.mrna1;Target=FBgn0005427.1 1340 1467 +
Chr1	stalkie_big_nohaplotig	exon	87423509	87423653	98	-	.	Parent=FBgn0005427.1.mrna1;Target=FBgn0005427.1 1195 1339 +
Chr1	stalkie_big_nohaplotig	exon	87423713	87423844	99	-	.	Parent=FBgn0005427.1.mrna1;Target=FBgn0005427.1 1063 1194 +
Chr1	stalkie_big_nohaplotig	exon	87427592	87427792	100	-	.	Parent=FBgn0005427.1.mrna1;Target=FBgn0005427.1 862 1062 +
Chr1	stalkie_big_nohaplotig	exon	87427874	87428734	99	-	.	Parent=FBgn0005427.1.mrna1;Target=FBgn0005427.1 1 861 +
Chr1	stalkie_big_nohaplotig	CDS	87419020	87419214	.	-	0	Parent=FBgn0005427.1.mrna1;Target=FBgn0005427.1 1468 1662 +
Chr1	stalkie_big_nohaplotig	CDS	87423238	87423365	.	-	2	Parent=FBgn0005427.1.mrna1;Target=FBgn0005427.1 1340 1467 +
Chr1	stalkie_big_nohaplotig	CDS	87423509	87423653	.	-	0	Parent=FBgn0005427.1.mrna1;Target=FBgn0005427.1 1195 1339 +
Chr1	stalkie_big_nohaplotig	CDS	87423713	87423844	.	-	0	Parent=FBgn0005427.1.mrna1;Target=FBgn0005427.1 1063 1194 +
Chr1	stalkie_big_nohaplotig	CDS	87427592	87427792	.	-	0	Parent=FBgn0005427.1.mrna1;Target=FBgn0005427.1 862 1062 +
Chr1	stalkie_big_nohaplotig	CDS	87427874	87428734	.	-	0	Parent=FBgn0005427.1.mrna1;Target=FBgn0005427.1 1 861 +
Chr1	gffcl	locus	87419340	87420075	.	-	.	ID=RLOC_00009333;geneIDs=comp151367_c0_seq1.path1;transcripts=comp151367_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87419340	87420075	.	-	.	ID=comp151367_c0_seq1.mrna1;geneID=comp151367_c0_seq1.path1;Name=comp151367_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=732;mismatches=4;indels=0;unknowns=0;Target=comp151367_c0_seq1 736 1 .;CDS_Target=comp151367_c0_seq1 538 383 .;locus=RLOC_00009333
Chr1	stalkie_big_nohaplotig	exon	87419340	87420075	99	-	.	Parent=comp151367_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	87419538	87419693	.	-	0	Parent=comp151367_c0_seq1.mrna1
Chr1	gffcl	locus	87420775	87422685	.	-	.	ID=RLOC_00009334;geneIDs=comp157967_c0_seq1.path1;transcripts=comp157967_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87420775	87422685	.	-	.	ID=comp157967_c0_seq1.mrna1;geneID=comp157967_c0_seq1.path1;Name=comp157967_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1899;mismatches=12;indels=1;unknowns=0;Target=comp157967_c0_seq1 1912 1 .;CDS_Target=comp157967_c0_seq1 1550 1410 .;locus=RLOC_00009334
Chr1	stalkie_big_nohaplotig	exon	87420775	87422685	99	-	.	Parent=comp157967_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	87421137	87421277	.	-	0	Parent=comp157967_c0_seq1.mrna1
Chr1	gffcl	locus	87441372	87442781	.	-	.	ID=RLOC_00009335;geneIDs=comp147058_c0_seq1.path1;transcripts=comp147058_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87441372	87442781	.	-	.	ID=comp147058_c0_seq1.mrna1;geneID=comp147058_c0_seq1.path1;Name=comp147058_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1406;mismatches=4;indels=0;unknowns=0;Target=comp147058_c0_seq1 1410 1 .;CDS_Target=comp147058_c0_seq1 1060 860 .;locus=RLOC_00009335
Chr1	stalkie_big_nohaplotig	exon	87441372	87442781	99	-	.	Parent=comp147058_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	87441722	87441922	.	-	0	Parent=comp147058_c0_seq1.mrna1
Chr1	gffcl	locus	87443073	87444633	.	-	.	ID=RLOC_00009336;geneIDs=FBgn0030752.1.path1;transcripts=FBgn0030752.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87443073	87444633	.	-	.	ID=FBgn0030752.1.mrna1;geneID=FBgn0030752.1.path1;Name=FBgn0030752.1;Dir=sensecoverage=100.0;identity=99.9;matches=1073;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009336
Chr1	stalkie_big_nohaplotig	exon	87443073	87443115	100	-	.	Parent=FBgn0030752.1.mrna1;Target=FBgn0030752.1 1032 1074 +
Chr1	stalkie_big_nohaplotig	exon	87443175	87443340	100	-	.	Parent=FBgn0030752.1.mrna1;Target=FBgn0030752.1 866 1031 +
Chr1	stalkie_big_nohaplotig	exon	87443403	87443538	100	-	.	Parent=FBgn0030752.1.mrna1;Target=FBgn0030752.1 730 865 +
Chr1	stalkie_big_nohaplotig	exon	87443594	87443793	100	-	.	Parent=FBgn0030752.1.mrna1;Target=FBgn0030752.1 530 729 +
Chr1	stalkie_big_nohaplotig	exon	87443862	87444054	100	-	.	Parent=FBgn0030752.1.mrna1;Target=FBgn0030752.1 337 529 +
Chr1	stalkie_big_nohaplotig	exon	87444122	87444393	99	-	.	Parent=FBgn0030752.1.mrna1;Target=FBgn0030752.1 65 336 +
Chr1	stalkie_big_nohaplotig	exon	87444570	87444633	100	-	.	Parent=FBgn0030752.1.mrna1;Target=FBgn0030752.1 1 64 +
Chr1	stalkie_big_nohaplotig	CDS	87443073	87443115	.	-	1	Parent=FBgn0030752.1.mrna1;Target=FBgn0030752.1 1032 1074 +
Chr1	stalkie_big_nohaplotig	CDS	87443175	87443340	.	-	2	Parent=FBgn0030752.1.mrna1;Target=FBgn0030752.1 866 1031 +
Chr1	stalkie_big_nohaplotig	CDS	87443403	87443538	.	-	0	Parent=FBgn0030752.1.mrna1;Target=FBgn0030752.1 730 865 +
Chr1	stalkie_big_nohaplotig	CDS	87443594	87443793	.	-	2	Parent=FBgn0030752.1.mrna1;Target=FBgn0030752.1 530 729 +
Chr1	stalkie_big_nohaplotig	CDS	87443862	87444054	.	-	0	Parent=FBgn0030752.1.mrna1;Target=FBgn0030752.1 337 529 +
Chr1	stalkie_big_nohaplotig	CDS	87444122	87444393	.	-	2	Parent=FBgn0030752.1.mrna1;Target=FBgn0030752.1 65 336 +
Chr1	stalkie_big_nohaplotig	CDS	87444570	87444633	.	-	0	Parent=FBgn0030752.1.mrna1;Target=FBgn0030752.1 1 64 +
Chr1	gffcl	locus	87451999	87458912	.	+	.	ID=RLOC_00009337;geneIDs=FBgn0261573.1.path1;transcripts=FBgn0261573.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87451999	87458912	.	+	.	ID=FBgn0261573.1.mrna1;geneID=FBgn0261573.1.path1;Name=FBgn0261573.1;Dir=sensecoverage=100.0;identity=100.0;matches=1344;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009337
Chr1	stalkie_big_nohaplotig	exon	87451999	87452221	100	+	.	Parent=FBgn0261573.1.mrna1;Target=FBgn0261573.1 1 223 +
Chr1	stalkie_big_nohaplotig	exon	87452276	87452323	100	+	.	Parent=FBgn0261573.1.mrna1;Target=FBgn0261573.1 224 271 +
Chr1	stalkie_big_nohaplotig	exon	87452382	87452516	100	+	.	Parent=FBgn0261573.1.mrna1;Target=FBgn0261573.1 272 406 +
Chr1	stalkie_big_nohaplotig	exon	87453133	87453347	100	+	.	Parent=FBgn0261573.1.mrna1;Target=FBgn0261573.1 407 621 +
Chr1	stalkie_big_nohaplotig	exon	87453403	87453570	100	+	.	Parent=FBgn0261573.1.mrna1;Target=FBgn0261573.1 622 789 +
Chr1	stalkie_big_nohaplotig	exon	87457693	87457857	100	+	.	Parent=FBgn0261573.1.mrna1;Target=FBgn0261573.1 790 954 +
Chr1	stalkie_big_nohaplotig	exon	87457916	87458206	100	+	.	Parent=FBgn0261573.1.mrna1;Target=FBgn0261573.1 955 1245 +
Chr1	stalkie_big_nohaplotig	exon	87458814	87458912	100	+	.	Parent=FBgn0261573.1.mrna1;Target=FBgn0261573.1 1246 1344 +
Chr1	stalkie_big_nohaplotig	CDS	87451999	87452221	.	+	0	Parent=FBgn0261573.1.mrna1;Target=FBgn0261573.1 1 223 +
Chr1	stalkie_big_nohaplotig	CDS	87452276	87452323	.	+	2	Parent=FBgn0261573.1.mrna1;Target=FBgn0261573.1 224 271 +
Chr1	stalkie_big_nohaplotig	CDS	87452382	87452516	.	+	2	Parent=FBgn0261573.1.mrna1;Target=FBgn0261573.1 272 406 +
Chr1	stalkie_big_nohaplotig	CDS	87453133	87453347	.	+	2	Parent=FBgn0261573.1.mrna1;Target=FBgn0261573.1 407 621 +
Chr1	stalkie_big_nohaplotig	CDS	87453403	87453570	.	+	0	Parent=FBgn0261573.1.mrna1;Target=FBgn0261573.1 622 789 +
Chr1	stalkie_big_nohaplotig	CDS	87457693	87457857	.	+	0	Parent=FBgn0261573.1.mrna1;Target=FBgn0261573.1 790 954 +
Chr1	stalkie_big_nohaplotig	CDS	87457916	87458206	.	+	0	Parent=FBgn0261573.1.mrna1;Target=FBgn0261573.1 955 1245 +
Chr1	stalkie_big_nohaplotig	CDS	87458814	87458912	.	+	0	Parent=FBgn0261573.1.mrna1;Target=FBgn0261573.1 1246 1344 +
Chr1	gffcl	locus	87478458	87511483	.	-	.	ID=RLOC_00009338;geneIDs=FBgn0052532.path1;transcripts=FBgn0052532.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87478458	87511483	.	-	.	ID=FBgn0052532.mrna1;geneID=FBgn0052532.path1;Name=FBgn0052532;Dir=sensecoverage=100.0;identity=99.9;matches=680;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009338
Chr1	stalkie_big_nohaplotig	exon	87478458	87478561	100	-	.	Parent=FBgn0052532.mrna1;Target=FBgn0052532 578 681 +
Chr1	stalkie_big_nohaplotig	exon	87483504	87483609	100	-	.	Parent=FBgn0052532.mrna1;Target=FBgn0052532 472 577 +
Chr1	stalkie_big_nohaplotig	exon	87484588	87484764	100	-	.	Parent=FBgn0052532.mrna1;Target=FBgn0052532 295 471 +
Chr1	stalkie_big_nohaplotig	exon	87495160	87495267	100	-	.	Parent=FBgn0052532.mrna1;Target=FBgn0052532 187 294 +
Chr1	stalkie_big_nohaplotig	exon	87511298	87511483	99	-	.	Parent=FBgn0052532.mrna1;Target=FBgn0052532 1 186 +
Chr1	stalkie_big_nohaplotig	CDS	87478458	87478561	.	-	2	Parent=FBgn0052532.mrna1;Target=FBgn0052532 578 681 +
Chr1	stalkie_big_nohaplotig	CDS	87483504	87483609	.	-	0	Parent=FBgn0052532.mrna1;Target=FBgn0052532 472 577 +
Chr1	stalkie_big_nohaplotig	CDS	87484588	87484764	.	-	0	Parent=FBgn0052532.mrna1;Target=FBgn0052532 295 471 +
Chr1	stalkie_big_nohaplotig	CDS	87495160	87495267	.	-	0	Parent=FBgn0052532.mrna1;Target=FBgn0052532 187 294 +
Chr1	stalkie_big_nohaplotig	CDS	87511298	87511483	.	-	0	Parent=FBgn0052532.mrna1;Target=FBgn0052532 1 186 +
Chr1	gffcl	locus	87514646	87517948	.	+	.	ID=RLOC_00009339;geneIDs=comp544790_c0_seq1.path1;transcripts=comp544790_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87514646	87517948	.	+	.	ID=comp544790_c0_seq1.mrna1;geneID=comp544790_c0_seq1.path1;Name=comp544790_c0_seq1;Dir=sensecoverage=97.3;identity=99.2;matches=1022;mismatches=7;indels=1;unknowns=0;Target=comp544790_c0_seq1 355 522 +;locus=RLOC_00009339
Chr1	stalkie_big_nohaplotig	exon	87514646	87514800	99	+	.	Parent=comp544790_c0_seq1.mrna1;Target=comp544790_c0_seq1 30 184 +
Chr1	stalkie_big_nohaplotig	exon	87515931	87516478	99	+	.	Parent=comp544790_c0_seq1.mrna1;Target=comp544790_c0_seq1 185 733 +
Chr1	stalkie_big_nohaplotig	exon	87517623	87517948	99	+	.	Parent=comp544790_c0_seq1.mrna1;Target=comp544790_c0_seq1 734 1059 +
Chr1	stalkie_big_nohaplotig	CDS	87516100	87516267	.	+	0	Parent=comp544790_c0_seq1.mrna1
Chr1	gffcl	locus	87521596	87522228	.	+	.	ID=RLOC_00009340;geneIDs=comp141551_c0_seq1.path1;transcripts=comp141551_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87521596	87522228	.	+	.	ID=comp141551_c0_seq1.mrna1;geneID=comp141551_c0_seq1.path1;Name=comp141551_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=531;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009340
Chr1	stalkie_big_nohaplotig	exon	87521596	87521693	100	+	.	Parent=comp141551_c0_seq1.mrna1;Target=comp141551_c0_seq1 1 98 +
Chr1	stalkie_big_nohaplotig	exon	87521795	87522228	99	+	.	Parent=comp141551_c0_seq1.mrna1;Target=comp141551_c0_seq1 99 532 +
Chr1	stalkie_big_nohaplotig	CDS	87521598	87521693	.	+	0	Parent=comp141551_c0_seq1.mrna1;Target=comp141551_c0_seq1 3 98 +
Chr1	stalkie_big_nohaplotig	CDS	87521795	87521827	.	+	0	Parent=comp141551_c0_seq1.mrna1;Target=comp141551_c0_seq1 99 131 +
Chr1	gffcl	locus	87522360	87522662	.	+	.	ID=RLOC_00009341;geneIDs=comp146779_c0_seq1.path1;transcripts=comp146779_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87522360	87522662	.	+	.	ID=comp146779_c0_seq1.mrna1;geneID=comp146779_c0_seq1.path1;Name=comp146779_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=303;mismatches=0;indels=0;unknowns=0;Target=comp146779_c0_seq1 303 1 .;CDS_Target=comp146779_c0_seq1 120 79 .;locus=RLOC_00009341
Chr1	stalkie_big_nohaplotig	exon	87522360	87522662	100	+	.	Parent=comp146779_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	87522438	87522479	.	+	0	Parent=comp146779_c0_seq1.mrna1
Chr1	gffcl	locus	87559274	87563463	.	-	.	ID=RLOC_00009342;geneIDs=FBgn0026430.1.path1;transcripts=FBgn0026430.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87559274	87563463	.	-	.	ID=FBgn0026430.1.mrna1;geneID=FBgn0026430.1.path1;Name=FBgn0026430.1;Dir=sensecoverage=100.0;identity=99.9;matches=2281;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009342
Chr1	stalkie_big_nohaplotig	exon	87559274	87559477	100	-	.	Parent=FBgn0026430.1.mrna1;Target=FBgn0026430.1 2080 2283 +
Chr1	stalkie_big_nohaplotig	exon	87560357	87560461	100	-	.	Parent=FBgn0026430.1.mrna1;Target=FBgn0026430.1 1975 2079 +
Chr1	stalkie_big_nohaplotig	exon	87560737	87560883	100	-	.	Parent=FBgn0026430.1.mrna1;Target=FBgn0026430.1 1828 1974 +
Chr1	stalkie_big_nohaplotig	exon	87560950	87561124	100	-	.	Parent=FBgn0026430.1.mrna1;Target=FBgn0026430.1 1653 1827 +
Chr1	stalkie_big_nohaplotig	exon	87561195	87561357	100	-	.	Parent=FBgn0026430.1.mrna1;Target=FBgn0026430.1 1490 1652 +
Chr1	stalkie_big_nohaplotig	exon	87561430	87561920	100	-	.	Parent=FBgn0026430.1.mrna1;Target=FBgn0026430.1 999 1489 +
Chr1	stalkie_big_nohaplotig	exon	87561986	87562239	100	-	.	Parent=FBgn0026430.1.mrna1;Target=FBgn0026430.1 745 998 +
Chr1	stalkie_big_nohaplotig	exon	87562301	87562429	100	-	.	Parent=FBgn0026430.1.mrna1;Target=FBgn0026430.1 616 744 +
Chr1	stalkie_big_nohaplotig	exon	87562499	87563014	99	-	.	Parent=FBgn0026430.1.mrna1;Target=FBgn0026430.1 100 615 +
Chr1	stalkie_big_nohaplotig	exon	87563365	87563463	100	-	.	Parent=FBgn0026430.1.mrna1;Target=FBgn0026430.1 1 99 +
Chr1	stalkie_big_nohaplotig	CDS	87559274	87559477	.	-	0	Parent=FBgn0026430.1.mrna1;Target=FBgn0026430.1 2080 2283 +
Chr1	stalkie_big_nohaplotig	CDS	87560357	87560461	.	-	0	Parent=FBgn0026430.1.mrna1;Target=FBgn0026430.1 1975 2079 +
Chr1	stalkie_big_nohaplotig	CDS	87560737	87560883	.	-	0	Parent=FBgn0026430.1.mrna1;Target=FBgn0026430.1 1828 1974 +
Chr1	stalkie_big_nohaplotig	CDS	87560950	87561124	.	-	1	Parent=FBgn0026430.1.mrna1;Target=FBgn0026430.1 1653 1827 +
Chr1	stalkie_big_nohaplotig	CDS	87561195	87561357	.	-	2	Parent=FBgn0026430.1.mrna1;Target=FBgn0026430.1 1490 1652 +
Chr1	stalkie_big_nohaplotig	CDS	87561430	87561920	.	-	1	Parent=FBgn0026430.1.mrna1;Target=FBgn0026430.1 999 1489 +
Chr1	stalkie_big_nohaplotig	CDS	87561986	87562239	.	-	0	Parent=FBgn0026430.1.mrna1;Target=FBgn0026430.1 745 998 +
Chr1	stalkie_big_nohaplotig	CDS	87562301	87562429	.	-	0	Parent=FBgn0026430.1.mrna1;Target=FBgn0026430.1 616 744 +
Chr1	stalkie_big_nohaplotig	CDS	87562499	87563014	.	-	0	Parent=FBgn0026430.1.mrna1;Target=FBgn0026430.1 100 615 +
Chr1	stalkie_big_nohaplotig	CDS	87563365	87563463	.	-	0	Parent=FBgn0026430.1.mrna1;Target=FBgn0026430.1 1 99 +
Chr1	gffcl	locus	87588850	87591498	.	+	.	ID=RLOC_00009343;geneIDs=FBgn0000257.1.path1;transcripts=FBgn0000257.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87588850	87591498	.	+	.	ID=FBgn0000257.1.mrna1;geneID=FBgn0000257.1.path1;Name=FBgn0000257.1;Dir=sensecoverage=100.0;identity=100.0;matches=1809;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009343
Chr1	stalkie_big_nohaplotig	exon	87588850	87590124	100	+	.	Parent=FBgn0000257.1.mrna1;Target=FBgn0000257.1 1 1275 +
Chr1	stalkie_big_nohaplotig	exon	87590183	87590314	100	+	.	Parent=FBgn0000257.1.mrna1;Target=FBgn0000257.1 1276 1407 +
Chr1	stalkie_big_nohaplotig	exon	87591097	87591498	100	+	.	Parent=FBgn0000257.1.mrna1;Target=FBgn0000257.1 1408 1809 +
Chr1	stalkie_big_nohaplotig	CDS	87588850	87590124	.	+	0	Parent=FBgn0000257.1.mrna1;Target=FBgn0000257.1 1 1275 +
Chr1	stalkie_big_nohaplotig	CDS	87590183	87590314	.	+	0	Parent=FBgn0000257.1.mrna1;Target=FBgn0000257.1 1276 1407 +
Chr1	stalkie_big_nohaplotig	CDS	87591097	87591498	.	+	0	Parent=FBgn0000257.1.mrna1;Target=FBgn0000257.1 1408 1809 +
Chr1	gffcl	locus	87593074	87595637	.	+	.	ID=RLOC_00009344;geneIDs=comp148492_c0_seq1.path1,comp159476_c2_seq1.path1;transcripts=comp159476_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87593074	87595210	.	+	.	ID=comp159476_c2_seq1.mrna1;geneID=comp159476_c2_seq1.path1;Name=comp159476_c2_seq1;Dir=indeterminatecoverage=99.9;identity=99.4;matches=2127;mismatches=10;indels=2;unknowns=0;Target=comp159476_c2_seq1 2141 3 .;CDS_Target=comp159476_c2_seq1 904 539 .;locus=RLOC_00009344
Chr1	stalkie_big_nohaplotig	exon	87593074	87595210	99	+	.	Parent=comp159476_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	87593609	87593973	.	+	0	Parent=comp159476_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87609063	87610070	.	-	.	ID=comp142762_c1_seq1.mrna1;geneID=comp142762_c1_seq1.path1;Name=comp142762_c1_seq1;Dir=antisensecoverage=100.0;identity=97.7;matches=821;mismatches=3;indels=16;unknowns=0;Target=comp142762_c1_seq1 329 478 .;locus=RLOC_00009345
Chr1	stalkie_big_nohaplotig	exon	87609063	87609084	100	-	.	Parent=comp142762_c1_seq1.mrna1;Target=comp142762_c1_seq1 1 22 -
Chr1	stalkie_big_nohaplotig	exon	87609269	87610070	97	-	.	Parent=comp142762_c1_seq1.mrna1;Target=comp142762_c1_seq1 23 840 -
Chr1	stalkie_big_nohaplotig	CDS	87609575	87609724	.	-	0	Parent=comp142762_c1_seq1.mrna1
Chr1	gffcl	locus	87625307	87627931	.	+	.	ID=RLOC_00009346;geneIDs=FBgn0028331.1.path1;transcripts=FBgn0028331.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87625307	87627931	.	+	.	ID=FBgn0028331.1.mrna1;geneID=FBgn0028331.1.path1;Name=FBgn0028331.1;Dir=sensecoverage=93.6;identity=99.9;matches=1686;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009346
Chr1	stalkie_big_nohaplotig	exon	87625307	87625824	99	+	.	Parent=FBgn0028331.1.mrna1;Target=FBgn0028331.1 116 633 +
Chr1	stalkie_big_nohaplotig	exon	87625897	87626019	100	+	.	Parent=FBgn0028331.1.mrna1;Target=FBgn0028331.1 634 756 +
Chr1	stalkie_big_nohaplotig	exon	87626381	87626573	100	+	.	Parent=FBgn0028331.1.mrna1;Target=FBgn0028331.1 757 949 +
Chr1	stalkie_big_nohaplotig	exon	87626635	87626844	100	+	.	Parent=FBgn0028331.1.mrna1;Target=FBgn0028331.1 950 1159 +
Chr1	stalkie_big_nohaplotig	exon	87626906	87627057	100	+	.	Parent=FBgn0028331.1.mrna1;Target=FBgn0028331.1 1160 1311 +
Chr1	stalkie_big_nohaplotig	exon	87627118	87627190	100	+	.	Parent=FBgn0028331.1.mrna1;Target=FBgn0028331.1 1312 1384 +
Chr1	stalkie_big_nohaplotig	exon	87627253	87627605	100	+	.	Parent=FBgn0028331.1.mrna1;Target=FBgn0028331.1 1385 1737 +
Chr1	stalkie_big_nohaplotig	exon	87627866	87627931	100	+	.	Parent=FBgn0028331.1.mrna1;Target=FBgn0028331.1 1738 1803 +
Chr1	stalkie_big_nohaplotig	CDS	87625309	87625824	.	+	0	Parent=FBgn0028331.1.mrna1;Target=FBgn0028331.1 118 633 +
Chr1	stalkie_big_nohaplotig	CDS	87625897	87626019	.	+	0	Parent=FBgn0028331.1.mrna1;Target=FBgn0028331.1 634 756 +
Chr1	stalkie_big_nohaplotig	CDS	87626381	87626573	.	+	0	Parent=FBgn0028331.1.mrna1;Target=FBgn0028331.1 757 949 +
Chr1	stalkie_big_nohaplotig	CDS	87626635	87626844	.	+	2	Parent=FBgn0028331.1.mrna1;Target=FBgn0028331.1 950 1159 +
Chr1	stalkie_big_nohaplotig	CDS	87626906	87627057	.	+	2	Parent=FBgn0028331.1.mrna1;Target=FBgn0028331.1 1160 1311 +
Chr1	stalkie_big_nohaplotig	CDS	87627118	87627190	.	+	0	Parent=FBgn0028331.1.mrna1;Target=FBgn0028331.1 1312 1384 +
Chr1	stalkie_big_nohaplotig	CDS	87627253	87627605	.	+	2	Parent=FBgn0028331.1.mrna1;Target=FBgn0028331.1 1385 1737 +
Chr1	stalkie_big_nohaplotig	CDS	87627866	87627931	.	+	0	Parent=FBgn0028331.1.mrna1;Target=FBgn0028331.1 1738 1803 +
Chr1	gffcl	locus	87634043	87637137	.	-	.	ID=RLOC_00009347;geneIDs=FBgn0029870.1.path1;transcripts=FBgn0029870.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87634043	87637137	.	-	.	ID=FBgn0029870.1.mrna1;geneID=FBgn0029870.1.path1;Name=FBgn0029870.1;Dir=sensecoverage=100.0;identity=99.9;matches=2356;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009347
Chr1	stalkie_big_nohaplotig	exon	87634043	87634241	100	-	.	Parent=FBgn0029870.1.mrna1;Target=FBgn0029870.1 2160 2358 +
Chr1	stalkie_big_nohaplotig	exon	87634304	87634500	99	-	.	Parent=FBgn0029870.1.mrna1;Target=FBgn0029870.1 1963 2159 +
Chr1	stalkie_big_nohaplotig	exon	87634560	87634721	100	-	.	Parent=FBgn0029870.1.mrna1;Target=FBgn0029870.1 1801 1962 +
Chr1	stalkie_big_nohaplotig	exon	87634878	87635119	100	-	.	Parent=FBgn0029870.1.mrna1;Target=FBgn0029870.1 1559 1800 +
Chr1	stalkie_big_nohaplotig	exon	87635177	87635738	100	-	.	Parent=FBgn0029870.1.mrna1;Target=FBgn0029870.1 997 1558 +
Chr1	stalkie_big_nohaplotig	exon	87635788	87635904	100	-	.	Parent=FBgn0029870.1.mrna1;Target=FBgn0029870.1 880 996 +
Chr1	stalkie_big_nohaplotig	exon	87636095	87636433	100	-	.	Parent=FBgn0029870.1.mrna1;Target=FBgn0029870.1 541 879 +
Chr1	stalkie_big_nohaplotig	exon	87636535	87636824	99	-	.	Parent=FBgn0029870.1.mrna1;Target=FBgn0029870.1 251 540 +
Chr1	stalkie_big_nohaplotig	exon	87636888	87637137	100	-	.	Parent=FBgn0029870.1.mrna1;Target=FBgn0029870.1 1 250 +
Chr1	stalkie_big_nohaplotig	CDS	87634043	87634241	.	-	1	Parent=FBgn0029870.1.mrna1;Target=FBgn0029870.1 2160 2358 +
Chr1	stalkie_big_nohaplotig	CDS	87634304	87634500	.	-	0	Parent=FBgn0029870.1.mrna1;Target=FBgn0029870.1 1963 2159 +
Chr1	stalkie_big_nohaplotig	CDS	87634560	87634721	.	-	0	Parent=FBgn0029870.1.mrna1;Target=FBgn0029870.1 1801 1962 +
Chr1	stalkie_big_nohaplotig	CDS	87634878	87635119	.	-	2	Parent=FBgn0029870.1.mrna1;Target=FBgn0029870.1 1559 1800 +
Chr1	stalkie_big_nohaplotig	CDS	87635177	87635738	.	-	0	Parent=FBgn0029870.1.mrna1;Target=FBgn0029870.1 997 1558 +
Chr1	stalkie_big_nohaplotig	CDS	87635788	87635904	.	-	0	Parent=FBgn0029870.1.mrna1;Target=FBgn0029870.1 880 996 +
Chr1	stalkie_big_nohaplotig	CDS	87636095	87636433	.	-	0	Parent=FBgn0029870.1.mrna1;Target=FBgn0029870.1 541 879 +
Chr1	stalkie_big_nohaplotig	CDS	87636535	87636824	.	-	2	Parent=FBgn0029870.1.mrna1;Target=FBgn0029870.1 251 540 +
Chr1	stalkie_big_nohaplotig	CDS	87636888	87637137	.	-	0	Parent=FBgn0029870.1.mrna1;Target=FBgn0029870.1 1 250 +
Chr1	gffcl	locus	87642003	87643388	.	-	.	ID=RLOC_00009348;geneIDs=comp143227_c2_seq1.path1;transcripts=comp143227_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87642003	87643388	.	-	.	ID=comp143227_c2_seq1.mrna1;geneID=comp143227_c2_seq1.path1;Name=comp143227_c2_seq1;Dir=indeterminatecoverage=100.0;identity=92.7;matches=1382;mismatches=2;indels=107;unknowns=0;Target=comp143227_c2_seq1 104 47 .;locus=RLOC_00009348
Chr1	stalkie_big_nohaplotig	exon	87642003	87643282	92	-	.	Parent=comp143227_c2_seq1.mrna1;Target=comp143227_c2_seq1 1537 151 .
Chr1	stalkie_big_nohaplotig	exon	87643285	87643388	100	-	.	Parent=comp143227_c2_seq1.mrna1;Target=comp143227_c2_seq1 104 1 .
Chr1	stalkie_big_nohaplotig	CDS	87643285	87643342	.	-	0	Parent=comp143227_c2_seq1.mrna1
Chr1	gffcl	locus	87662279	87663230	.	+	.	ID=RLOC_00009349;geneIDs=comp119299_c0_seq1.path1;transcripts=comp119299_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87662279	87663230	.	+	.	ID=comp119299_c0_seq1.mrna1;geneID=comp119299_c0_seq1.path1;Name=comp119299_c0_seq1;Dir=sensecoverage=100.0;identity=98.7;matches=588;mismatches=8;indels=0;unknowns=0;locus=RLOC_00009349
Chr1	stalkie_big_nohaplotig	exon	87662279	87662332	96	+	.	Parent=comp119299_c0_seq1.mrna1;Target=comp119299_c0_seq1 1 54 +
Chr1	stalkie_big_nohaplotig	exon	87662689	87663230	98	+	.	Parent=comp119299_c0_seq1.mrna1;Target=comp119299_c0_seq1 55 596 +
Chr1	stalkie_big_nohaplotig	CDS	87662280	87662332	.	+	0	Parent=comp119299_c0_seq1.mrna1;Target=comp119299_c0_seq1 2 54 +
Chr1	stalkie_big_nohaplotig	CDS	87662689	87663091	.	+	1	Parent=comp119299_c0_seq1.mrna1;Target=comp119299_c0_seq1 55 457 +
Chr1	gffcl	locus	87672653	87674370	.	-	.	ID=RLOC_00009351;geneIDs=comp163174_c1_seq1.path1;transcripts=comp163174_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87672653	87674370	.	-	.	ID=comp163174_c1_seq1.mrna1;geneID=comp163174_c1_seq1.path1;Name=comp163174_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1709;mismatches=7;indels=2;unknowns=0;Target=comp163174_c1_seq1 1716 1 .;CDS_Target=comp163174_c1_seq1 1273 1076 .;locus=RLOC_00009351
Chr1	stalkie_big_nohaplotig	exon	87672653	87674370	99	-	.	Parent=comp163174_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	87673096	87673293	.	-	0	Parent=comp163174_c1_seq1.mrna1
Chr1	gffcl	locus	87674660	87675245	.	-	.	ID=RLOC_00009352;geneIDs=comp224589_c0_seq1.path1;transcripts=comp224589_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87674660	87675245	.	-	.	ID=comp224589_c0_seq1.mrna1;geneID=comp224589_c0_seq1.path1;Name=comp224589_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.7;matches=584;mismatches=2;indels=0;unknowns=0;Target=comp224589_c0_seq1 586 1 .;CDS_Target=comp224589_c0_seq1 230 135 .;locus=RLOC_00009352
Chr1	stalkie_big_nohaplotig	exon	87674660	87675245	99	-	.	Parent=comp224589_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	87675016	87675111	.	-	0	Parent=comp224589_c0_seq1.mrna1
Chr1	gffcl	locus	87675527	87679290	.	-	.	ID=RLOC_00009353;geneIDs=FBgn0029893.1.path1;transcripts=FBgn0029893.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87675527	87679290	.	-	.	ID=FBgn0029893.1.mrna1;geneID=FBgn0029893.1.path1;Name=FBgn0029893.1;Dir=sensecoverage=100.0;identity=100.0;matches=2499;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009353
Chr1	stalkie_big_nohaplotig	exon	87675527	87676813	100	-	.	Parent=FBgn0029893.1.mrna1;Target=FBgn0029893.1 1213 2499 +
Chr1	stalkie_big_nohaplotig	exon	87678079	87679290	100	-	.	Parent=FBgn0029893.1.mrna1;Target=FBgn0029893.1 1 1212 +
Chr1	stalkie_big_nohaplotig	CDS	87675527	87676813	.	-	0	Parent=FBgn0029893.1.mrna1;Target=FBgn0029893.1 1213 2499 +
Chr1	stalkie_big_nohaplotig	CDS	87678079	87679290	.	-	0	Parent=FBgn0029893.1.mrna1;Target=FBgn0029893.1 1 1212 +
Chr1	gffcl	locus	87681510	87685034	.	+	.	ID=RLOC_00009354;geneIDs=FBgn0031606.1.path1;transcripts=FBgn0031606.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87681510	87685034	.	+	.	ID=FBgn0031606.1.mrna1;geneID=FBgn0031606.1.path1;Name=FBgn0031606.1;Dir=sensecoverage=100.0;identity=99.9;matches=3061;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009354
Chr1	stalkie_big_nohaplotig	exon	87681510	87681614	100	+	.	Parent=FBgn0031606.1.mrna1;Target=FBgn0031606.1 1 105 +
Chr1	stalkie_big_nohaplotig	exon	87681954	87683243	99	+	.	Parent=FBgn0031606.1.mrna1;Target=FBgn0031606.1 106 1395 +
Chr1	stalkie_big_nohaplotig	exon	87683313	87684120	100	+	.	Parent=FBgn0031606.1.mrna1;Target=FBgn0031606.1 1396 2203 +
Chr1	stalkie_big_nohaplotig	exon	87684175	87685034	100	+	.	Parent=FBgn0031606.1.mrna1;Target=FBgn0031606.1 2204 3063 +
Chr1	stalkie_big_nohaplotig	CDS	87681510	87681614	.	+	0	Parent=FBgn0031606.1.mrna1;Target=FBgn0031606.1 1 105 +
Chr1	stalkie_big_nohaplotig	CDS	87681954	87683243	.	+	0	Parent=FBgn0031606.1.mrna1;Target=FBgn0031606.1 106 1395 +
Chr1	stalkie_big_nohaplotig	CDS	87683313	87684120	.	+	0	Parent=FBgn0031606.1.mrna1;Target=FBgn0031606.1 1396 2203 +
Chr1	stalkie_big_nohaplotig	CDS	87684175	87685034	.	+	2	Parent=FBgn0031606.1.mrna1;Target=FBgn0031606.1 2204 3063 +
Chr1	gffcl	locus	87686737	87687519	.	-	.	ID=RLOC_00009355;geneIDs=FBgn0029894.1.path1;transcripts=FBgn0029894.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87686737	87687519	.	-	.	ID=FBgn0029894.1.mrna1;geneID=FBgn0029894.1.path1;Name=FBgn0029894.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=783;mismatches=0;indels=0;unknowns=0;Target=FBgn0029894.1 783 1 .;locus=RLOC_00009355
Chr1	stalkie_big_nohaplotig	exon	87686737	87687519	100	-	.	Parent=FBgn0029894.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	87686737	87687519	.	-	0	Parent=FBgn0029894.1.mrna1
Chr1	gffcl	locus	87733288	87749455	.	+	.	ID=RLOC_00009356;geneIDs=FBgn0029895.1.path1;transcripts=FBgn0029895.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87733288	87749455	.	+	.	ID=FBgn0029895.1.mrna1;geneID=FBgn0029895.1.path1;Name=FBgn0029895.1;Dir=sensecoverage=100.0;identity=99.6;matches=2831;mismatches=10;indels=0;unknowns=0;locus=RLOC_00009356
Chr1	stalkie_big_nohaplotig	exon	87733288	87733452	100	+	.	Parent=FBgn0029895.1.mrna1;Target=FBgn0029895.1 1 165 +
Chr1	stalkie_big_nohaplotig	exon	87746482	87747257	99	+	.	Parent=FBgn0029895.1.mrna1;Target=FBgn0029895.1 166 941 +
Chr1	stalkie_big_nohaplotig	exon	87747317	87747415	100	+	.	Parent=FBgn0029895.1.mrna1;Target=FBgn0029895.1 942 1040 +
Chr1	stalkie_big_nohaplotig	exon	87747480	87747584	100	+	.	Parent=FBgn0029895.1.mrna1;Target=FBgn0029895.1 1041 1145 +
Chr1	stalkie_big_nohaplotig	exon	87747637	87748410	99	+	.	Parent=FBgn0029895.1.mrna1;Target=FBgn0029895.1 1146 1919 +
Chr1	stalkie_big_nohaplotig	exon	87748468	87748527	100	+	.	Parent=FBgn0029895.1.mrna1;Target=FBgn0029895.1 1920 1979 +
Chr1	stalkie_big_nohaplotig	exon	87748594	87749455	99	+	.	Parent=FBgn0029895.1.mrna1;Target=FBgn0029895.1 1980 2841 +
Chr1	stalkie_big_nohaplotig	CDS	87733288	87733452	.	+	0	Parent=FBgn0029895.1.mrna1;Target=FBgn0029895.1 1 165 +
Chr1	stalkie_big_nohaplotig	CDS	87746482	87747257	.	+	0	Parent=FBgn0029895.1.mrna1;Target=FBgn0029895.1 166 941 +
Chr1	stalkie_big_nohaplotig	CDS	87747317	87747415	.	+	1	Parent=FBgn0029895.1.mrna1;Target=FBgn0029895.1 942 1040 +
Chr1	stalkie_big_nohaplotig	CDS	87747480	87747584	.	+	1	Parent=FBgn0029895.1.mrna1;Target=FBgn0029895.1 1041 1145 +
Chr1	stalkie_big_nohaplotig	CDS	87747637	87748410	.	+	1	Parent=FBgn0029895.1.mrna1;Target=FBgn0029895.1 1146 1919 +
Chr1	stalkie_big_nohaplotig	CDS	87748468	87748527	.	+	1	Parent=FBgn0029895.1.mrna1;Target=FBgn0029895.1 1920 1979 +
Chr1	stalkie_big_nohaplotig	CDS	87748594	87749455	.	+	1	Parent=FBgn0029895.1.mrna1;Target=FBgn0029895.1 1980 2841 +
Chr1	gffcl	locus	87793621	87795537	.	-	.	ID=RLOC_00009358;geneIDs=FBgn0025628.1.path1;transcripts=FBgn0025628.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87793621	87795537	.	-	.	ID=FBgn0025628.1.mrna1;geneID=FBgn0025628.1.path1;Name=FBgn0025628.1;Dir=sensecoverage=86.7;identity=100.0;matches=1686;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009358
Chr1	stalkie_big_nohaplotig	exon	87793621	87794388	100	-	.	Parent=FBgn0025628.1.mrna1;Target=FBgn0025628.1 1177 1944 +
Chr1	stalkie_big_nohaplotig	exon	87794620	87795537	100	-	.	Parent=FBgn0025628.1.mrna1;Target=FBgn0025628.1 259 1176 +
Chr1	stalkie_big_nohaplotig	CDS	87793621	87794388	.	-	0	Parent=FBgn0025628.1.mrna1;Target=FBgn0025628.1 1177 1944 +
Chr1	stalkie_big_nohaplotig	CDS	87794620	87795537	.	-	0	Parent=FBgn0025628.1.mrna1;Target=FBgn0025628.1 259 1176 +
Chr1	gffcl	locus	87839664	87839809	.	+	.	ID=RLOC_00009359;geneIDs=comp135128_c0_seq1.path5;transcripts=comp135128_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	87839664	87839809	.	+	.	ID=comp135128_c0_seq1.mrna5;geneID=comp135128_c0_seq1.path5;Name=comp135128_c0_seq1;Dir=indeterminatecoverage=46.9;identity=84.2;matches=123;mismatches=23;indels=0;unknowns=0;Target=comp135128_c0_seq1 309 164 .;CDS_Target=comp135128_c0_seq1 215 165 .;locus=RLOC_00009359
Chr1	stalkie_big_nohaplotig	exon	87839664	87839809	84	+	.	Parent=comp135128_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	87839665	87839715	.	+	0	Parent=comp135128_c0_seq1.mrna5
Chr1	gffcl	locus	87846610	87847518	.	-	.	ID=RLOC_00009360;geneIDs=FBgn0029882.1.path1;transcripts=FBgn0029882.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87846610	87847518	.	-	.	ID=FBgn0029882.1.mrna1;geneID=FBgn0029882.1.path1;Name=FBgn0029882.1;Dir=sensecoverage=100.0;identity=100.0;matches=699;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009360
Chr1	stalkie_big_nohaplotig	exon	87846610	87847093	100	-	.	Parent=FBgn0029882.1.mrna1;Target=FBgn0029882.1 216 699 +
Chr1	stalkie_big_nohaplotig	exon	87847242	87847417	100	-	.	Parent=FBgn0029882.1.mrna1;Target=FBgn0029882.1 40 215 +
Chr1	stalkie_big_nohaplotig	exon	87847480	87847518	100	-	.	Parent=FBgn0029882.1.mrna1;Target=FBgn0029882.1 1 39 +
Chr1	stalkie_big_nohaplotig	CDS	87846610	87847093	.	-	1	Parent=FBgn0029882.1.mrna1;Target=FBgn0029882.1 216 699 +
Chr1	stalkie_big_nohaplotig	CDS	87847242	87847417	.	-	0	Parent=FBgn0029882.1.mrna1;Target=FBgn0029882.1 40 215 +
Chr1	stalkie_big_nohaplotig	CDS	87847480	87847518	.	-	0	Parent=FBgn0029882.1.mrna1;Target=FBgn0029882.1 1 39 +
Chr1	gffcl	locus	87857819	87858509	.	+	.	ID=RLOC_00009362;geneIDs=comp152545_c0_seq1.path1;transcripts=comp152545_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87857819	87858509	.	+	.	ID=comp152545_c0_seq1.mrna1;geneID=comp152545_c0_seq1.path1;Name=comp152545_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=673;mismatches=4;indels=14;unknowns=0;Target=comp152545_c0_seq1 677 1 .;CDS_Target=comp152545_c0_seq1 136 2 .;locus=RLOC_00009362
Chr1	stalkie_big_nohaplotig	exon	87857819	87858509	97	+	.	Parent=comp152545_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	87857820	87857954	.	+	0	Parent=comp152545_c0_seq1.mrna1
Chr1	gffcl	locus	87865683	87866170	.	-	.	ID=RLOC_00009363;geneIDs=comp118523_c0_seq1.path1;transcripts=comp118523_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87865683	87866170	.	-	.	ID=comp118523_c0_seq1.mrna1;geneID=comp118523_c0_seq1.path1;Name=comp118523_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=486;mismatches=2;indels=0;unknowns=0;Target=comp118523_c0_seq1 488 1 .;CDS_Target=comp118523_c0_seq1 218 3 .;locus=RLOC_00009363
Chr1	stalkie_big_nohaplotig	exon	87865683	87866170	99	-	.	Parent=comp118523_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	87865953	87866168	.	-	0	Parent=comp118523_c0_seq1.mrna1
Chr1	gffcl	locus	87914973	87916280	.	-	.	ID=RLOC_00009364;geneIDs=comp160240_c6_seq1.path1;transcripts=comp160240_c6_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87914973	87916280	.	-	.	ID=comp160240_c6_seq1.mrna1;geneID=comp160240_c6_seq1.path1;Name=comp160240_c6_seq1;Dir=indeterminatecoverage=100.0;identity=92.5;matches=1080;mismatches=3;indels=85;unknowns=0;Target=comp160240_c6_seq1 305 3 .;locus=RLOC_00009364
Chr1	stalkie_big_nohaplotig	exon	87914973	87914994	100	-	.	Parent=comp160240_c6_seq1.mrna1;Target=comp160240_c6_seq1 1253 1232 .
Chr1	stalkie_big_nohaplotig	exon	87915220	87916280	92	-	.	Parent=comp160240_c6_seq1.mrna1;Target=comp160240_c6_seq1 1146 1 .
Chr1	stalkie_big_nohaplotig	CDS	87915976	87916278	.	-	0	Parent=comp160240_c6_seq1.mrna1
Chr1	gffcl	locus	87926714	87927209	.	+	.	ID=RLOC_00009365;geneIDs=comp149115_c0_seq1.path1;transcripts=comp149115_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87926714	87927209	.	+	.	ID=comp149115_c0_seq1.mrna1;geneID=comp149115_c0_seq1.path1;Name=comp149115_c0_seq1;Dir=indeterminatecoverage=96.9;identity=99.8;matches=495;mismatches=1;indels=0;unknowns=0;Target=comp149115_c0_seq1 512 17 .;CDS_Target=comp149115_c0_seq1 128 18 .;locus=RLOC_00009365
Chr1	stalkie_big_nohaplotig	exon	87926714	87927209	99	+	.	Parent=comp149115_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	87926715	87926825	.	+	0	Parent=comp149115_c0_seq1.mrna1
Chr1	gffcl	locus	87952713	87953285	.	-	.	ID=RLOC_00009368;geneIDs=comp151844_c0_seq1.path1;transcripts=comp151844_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87952713	87953285	.	-	.	ID=comp151844_c0_seq1.mrna1;geneID=comp151844_c0_seq1.path1;Name=comp151844_c0_seq1;Dir=indeterminatecoverage=96.7;identity=96.8;matches=570;mismatches=3;indels=16;unknowns=0;Target=comp151844_c0_seq1 589 1 .;CDS_Target=comp151844_c0_seq1 189 1 .;locus=RLOC_00009368
Chr1	stalkie_big_nohaplotig	exon	87952713	87953285	96	-	.	Parent=comp151844_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	87953097	87953285	.	-	0	Parent=comp151844_c0_seq1.mrna1
Chr1	gffcl	locus	87976029	87978015	.	+	.	ID=RLOC_00009369;geneIDs=FBgn0029879.1.path1;transcripts=FBgn0029879.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87976029	87978015	.	+	.	ID=FBgn0029879.1.mrna1;geneID=FBgn0029879.1.path1;Name=FBgn0029879.1;Dir=sensecoverage=100.0;identity=100.0;matches=1767;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009369
Chr1	stalkie_big_nohaplotig	exon	87976029	87976103	100	+	.	Parent=FBgn0029879.1.mrna1;Target=FBgn0029879.1 1 75 +
Chr1	stalkie_big_nohaplotig	exon	87976154	87976655	100	+	.	Parent=FBgn0029879.1.mrna1;Target=FBgn0029879.1 76 577 +
Chr1	stalkie_big_nohaplotig	exon	87976720	87977378	100	+	.	Parent=FBgn0029879.1.mrna1;Target=FBgn0029879.1 578 1236 +
Chr1	stalkie_big_nohaplotig	exon	87977431	87977711	100	+	.	Parent=FBgn0029879.1.mrna1;Target=FBgn0029879.1 1237 1517 +
Chr1	stalkie_big_nohaplotig	exon	87977766	87978015	100	+	.	Parent=FBgn0029879.1.mrna1;Target=FBgn0029879.1 1518 1767 +
Chr1	stalkie_big_nohaplotig	CDS	87976029	87976103	.	+	0	Parent=FBgn0029879.1.mrna1;Target=FBgn0029879.1 1 75 +
Chr1	stalkie_big_nohaplotig	CDS	87976154	87976655	.	+	0	Parent=FBgn0029879.1.mrna1;Target=FBgn0029879.1 76 577 +
Chr1	stalkie_big_nohaplotig	CDS	87976720	87977378	.	+	2	Parent=FBgn0029879.1.mrna1;Target=FBgn0029879.1 578 1236 +
Chr1	stalkie_big_nohaplotig	CDS	87977431	87977711	.	+	0	Parent=FBgn0029879.1.mrna1;Target=FBgn0029879.1 1237 1517 +
Chr1	stalkie_big_nohaplotig	CDS	87977766	87978015	.	+	1	Parent=FBgn0029879.1.mrna1;Target=FBgn0029879.1 1518 1767 +
Chr1	gffcl	locus	87978253	87978672	.	-	.	ID=RLOC_00009370;geneIDs=FBgn0043002.1.path1;transcripts=FBgn0043002.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	87978253	87978672	.	-	.	ID=FBgn0043002.1.mrna1;geneID=FBgn0043002.1.path1;Name=FBgn0043002.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=420;mismatches=0;indels=0;unknowns=0;Target=FBgn0043002.1 420 1 .;locus=RLOC_00009370
Chr1	stalkie_big_nohaplotig	exon	87978253	87978672	100	-	.	Parent=FBgn0043002.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	87978253	87978672	.	-	0	Parent=FBgn0043002.1.mrna1
Chr1	gffcl	locus	88005461	88006350	.	-	.	ID=RLOC_00009371;geneIDs=FBgn0030678.1.path1;transcripts=FBgn0030678.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88005461	88006350	.	-	.	ID=FBgn0030678.1.mrna1;geneID=FBgn0030678.1.path1;Name=FBgn0030678.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=890;mismatches=0;indels=1;unknowns=0;Target=FBgn0030678.1 891 1 .;CDS_Target=FBgn0030678.1 44 3 .;locus=RLOC_00009371
Chr1	stalkie_big_nohaplotig	exon	88005461	88006350	99	-	.	Parent=FBgn0030678.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	88006308	88006348	.	-	0	Parent=FBgn0030678.1.mrna1
Chr1	gffcl	locus	88007933	88008393	.	+	.	ID=RLOC_00009372;geneIDs=FBgn0026089.1.path1;transcripts=FBgn0026089.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88007933	88008393	.	+	.	ID=FBgn0026089.1.mrna1;geneID=FBgn0026089.1.path1;Name=FBgn0026089.1;Dir=sensecoverage=100.0;identity=100.0;matches=411;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009372
Chr1	stalkie_big_nohaplotig	exon	88007933	88008196	100	+	.	Parent=FBgn0026089.1.mrna1;Target=FBgn0026089.1 1 264 +
Chr1	stalkie_big_nohaplotig	exon	88008247	88008393	100	+	.	Parent=FBgn0026089.1.mrna1;Target=FBgn0026089.1 265 411 +
Chr1	stalkie_big_nohaplotig	CDS	88007933	88008196	.	+	0	Parent=FBgn0026089.1.mrna1;Target=FBgn0026089.1 1 264 +
Chr1	stalkie_big_nohaplotig	CDS	88008247	88008393	.	+	0	Parent=FBgn0026089.1.mrna1;Target=FBgn0026089.1 265 411 +
Chr1	gffcl	locus	88009125	88010849	.	-	.	ID=RLOC_00009373;geneIDs=FBgn0014411.1.path1;transcripts=FBgn0014411.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88009125	88010849	.	-	.	ID=FBgn0014411.1.mrna1;geneID=FBgn0014411.1.path1;Name=FBgn0014411.1;Dir=sensecoverage=100.0;identity=100.0;matches=1401;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009373
Chr1	stalkie_big_nohaplotig	exon	88009125	88010363	100	-	.	Parent=FBgn0014411.1.mrna1;Target=FBgn0014411.1 163 1401 +
Chr1	stalkie_big_nohaplotig	exon	88010688	88010849	100	-	.	Parent=FBgn0014411.1.mrna1;Target=FBgn0014411.1 1 162 +
Chr1	stalkie_big_nohaplotig	CDS	88009125	88010363	.	-	0	Parent=FBgn0014411.1.mrna1;Target=FBgn0014411.1 163 1401 +
Chr1	stalkie_big_nohaplotig	CDS	88010688	88010849	.	-	0	Parent=FBgn0014411.1.mrna1;Target=FBgn0014411.1 1 162 +
Chr1	gffcl	locus	88087044	88088010	.	+	.	ID=RLOC_00009374;geneIDs=comp145054_c0_seq1.path1;transcripts=comp145054_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88087044	88088010	.	+	.	ID=comp145054_c0_seq1.mrna1;geneID=comp145054_c0_seq1.path1;Name=comp145054_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=848;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009374
Chr1	stalkie_big_nohaplotig	exon	88087044	88087357	99	+	.	Parent=comp145054_c0_seq1.mrna1;Target=comp145054_c0_seq1 1 314 +
Chr1	stalkie_big_nohaplotig	exon	88087414	88087553	100	+	.	Parent=comp145054_c0_seq1.mrna1;Target=comp145054_c0_seq1 315 454 +
Chr1	stalkie_big_nohaplotig	exon	88087616	88088010	100	+	.	Parent=comp145054_c0_seq1.mrna1;Target=comp145054_c0_seq1 455 849 +
Chr1	stalkie_big_nohaplotig	CDS	88087334	88087357	.	+	0	Parent=comp145054_c0_seq1.mrna1;Target=comp145054_c0_seq1 291 314 +
Chr1	stalkie_big_nohaplotig	CDS	88087414	88087553	.	+	0	Parent=comp145054_c0_seq1.mrna1;Target=comp145054_c0_seq1 315 454 +
Chr1	stalkie_big_nohaplotig	CDS	88087616	88087877	.	+	1	Parent=comp145054_c0_seq1.mrna1;Target=comp145054_c0_seq1 455 716 +
Chr1	gffcl	locus	88152398	88153232	.	-	.	ID=RLOC_00009375;geneIDs=comp113108_c0_seq1.path1;transcripts=comp113108_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88152398	88153232	.	-	.	ID=comp113108_c0_seq1.mrna1;geneID=comp113108_c0_seq1.path1;Name=comp113108_c0_seq1;Dir=indeterminatecoverage=98.7;identity=99.8;matches=833;mismatches=2;indels=0;unknowns=0;Target=comp113108_c0_seq1 846 12 .;CDS_Target=comp113108_c0_seq1 747 625 .;locus=RLOC_00009375
Chr1	stalkie_big_nohaplotig	exon	88152398	88153232	99	-	.	Parent=comp113108_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	88152497	88152619	.	-	0	Parent=comp113108_c0_seq1.mrna1
Chr1	gffcl	locus	88165071	88173935	.	-	.	ID=RLOC_00009376;geneIDs=comp148917_c0_seq1.path1;transcripts=comp148917_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88165071	88173935	.	-	.	ID=comp148917_c0_seq1.mrna1;geneID=comp148917_c0_seq1.path1;Name=comp148917_c0_seq1;Dir=antisensecoverage=97.4;identity=99.7;matches=1180;mismatches=4;indels=0;unknowns=0;locus=RLOC_00009376
Chr1	stalkie_big_nohaplotig	exon	88165071	88165709	99	-	.	Parent=comp148917_c0_seq1.mrna1;Target=comp148917_c0_seq1 32 670 -
Chr1	stalkie_big_nohaplotig	exon	88171151	88171373	99	-	.	Parent=comp148917_c0_seq1.mrna1;Target=comp148917_c0_seq1 671 893 -
Chr1	stalkie_big_nohaplotig	exon	88173614	88173935	99	-	.	Parent=comp148917_c0_seq1.mrna1;Target=comp148917_c0_seq1 894 1215 -
Chr1	stalkie_big_nohaplotig	CDS	88165555	88165709	.	-	2	Parent=comp148917_c0_seq1.mrna1;Target=comp148917_c0_seq1 516 670 .
Chr1	stalkie_big_nohaplotig	CDS	88171151	88171373	.	-	0	Parent=comp148917_c0_seq1.mrna1;Target=comp148917_c0_seq1 671 893 .
Chr1	gffcl	locus	88173937	88175506	.	-	.	ID=RLOC_00009377;geneIDs=comp155318_c0_seq1.path1;transcripts=comp155318_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88173937	88175506	.	-	.	ID=comp155318_c0_seq1.mrna1;geneID=comp155318_c0_seq1.path1;Name=comp155318_c0_seq1;Dir=indeterminatecoverage=98.5;identity=99.6;matches=1564;mismatches=6;indels=1;unknowns=0;Target=comp155318_c0_seq1 1595 25 .;CDS_Target=comp155318_c0_seq1 1573 1466 .;locus=RLOC_00009377
Chr1	stalkie_big_nohaplotig	exon	88173937	88175506	99	-	.	Parent=comp155318_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	88173959	88174066	.	-	0	Parent=comp155318_c0_seq1.mrna1
Chr1	gffcl	locus	88243444	88488977	.	+	.	ID=RLOC_00009378;geneIDs=comp160265_c0_seq1.path1;transcripts=comp160265_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88243444	88488977	.	+	.	ID=comp160265_c0_seq1.mrna1;geneID=comp160265_c0_seq1.path1;Name=comp160265_c0_seq1;Dir=sensecoverage=47.7;identity=95.1;matches=2243;mismatches=40;indels=76;unknowns=0;locus=RLOC_00009378
Chr1	stalkie_big_nohaplotig	exon	88243444	88244619	98	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 2563 3728 +
Chr1	stalkie_big_nohaplotig	exon	88252730	88252889	100	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 3729 3888 +
Chr1	stalkie_big_nohaplotig	exon	88252942	88253661	99	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 3889 4608 +
Chr1	stalkie_big_nohaplotig	exon	88265608	88265611	100	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4609 4612 +
Chr1	stalkie_big_nohaplotig	exon	88272258	88272260	100	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4613 4615 +
Chr1	stalkie_big_nohaplotig	exon	88278646	88278650	100	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4616 4620 +
Chr1	stalkie_big_nohaplotig	exon	88281190	88281191	100	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4621 4622 +
Chr1	stalkie_big_nohaplotig	exon	88284334	88284338	100	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4623 4627 +
Chr1	stalkie_big_nohaplotig	exon	88300002	88300005	100	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4628 4631 +
Chr1	stalkie_big_nohaplotig	exon	88303443	88303471	55	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4632 4659 +
Chr1	stalkie_big_nohaplotig	exon	88309437	88309453	94	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4660 4675 +
Chr1	stalkie_big_nohaplotig	exon	88352625	88352643	84	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4676 4693 +
Chr1	stalkie_big_nohaplotig	exon	88357139	88357141	100	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4694 4696 +
Chr1	stalkie_big_nohaplotig	exon	88361340	88361342	100	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4697 4699 +
Chr1	stalkie_big_nohaplotig	exon	88369712	88369713	100	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4700 4701 +
Chr1	stalkie_big_nohaplotig	exon	88375371	88375382	100	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4702 4713 +
Chr1	stalkie_big_nohaplotig	exon	88380863	88380900	34	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4719 4810 +
Chr1	stalkie_big_nohaplotig	exon	88404402	88404408	71	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4836 4842 +
Chr1	stalkie_big_nohaplotig	exon	88408986	88408992	85	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4843 4849 +
Chr1	stalkie_big_nohaplotig	exon	88412244	88412250	85	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4850 4856 +
Chr1	stalkie_big_nohaplotig	exon	88417329	88417331	100	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4857 4859 +
Chr1	stalkie_big_nohaplotig	exon	88423114	88423120	100	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4860 4866 +
Chr1	stalkie_big_nohaplotig	exon	88426274	88426278	100	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4867 4871 +
Chr1	stalkie_big_nohaplotig	exon	88427049	88427057	100	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4872 4880 +
Chr1	stalkie_big_nohaplotig	exon	88427071	88427078	100	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4927 4934 +
Chr1	stalkie_big_nohaplotig	exon	88434992	88435021	56	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4955 4975 +
Chr1	stalkie_big_nohaplotig	exon	88435039	88435049	100	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 5027 5037 +
Chr1	stalkie_big_nohaplotig	exon	88488971	88488977	100	+	.	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 5110 5116 +
Chr1	stalkie_big_nohaplotig	CDS	88244406	88244619	.	+	0	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 3515 3728 +
Chr1	stalkie_big_nohaplotig	CDS	88252730	88252889	.	+	2	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 3729 3888 +
Chr1	stalkie_big_nohaplotig	CDS	88252942	88253661	.	+	1	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 3889 4608 +
Chr1	stalkie_big_nohaplotig	CDS	88265608	88265611	.	+	1	Parent=comp160265_c0_seq1.mrna1;Target=comp160265_c0_seq1 4609 4612 +
Chr1	gffcl	locus	88255351	88256258	.	+	.	ID=RLOC_00009379;geneIDs=comp153374_c0_seq1.path1;transcripts=comp153374_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88255351	88256258	.	+	.	ID=comp153374_c0_seq1.mrna1;geneID=comp153374_c0_seq1.path1;Name=comp153374_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.2;matches=903;mismatches=5;indels=31;unknowns=0;Target=comp153374_c0_seq1 939 1 .;CDS_Target=comp153374_c0_seq1 770 609 .;locus=RLOC_00009379
Chr1	stalkie_big_nohaplotig	exon	88255351	88256258	96	+	.	Parent=comp153374_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	88255959	88256120	.	+	0	Parent=comp153374_c0_seq1.mrna1
Chr1	gffcl	locus	88256371	88256899	.	-	.	ID=RLOC_00009380;geneIDs=comp143139_c0_seq1.path1;transcripts=comp143139_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88256371	88256899	.	-	.	ID=comp143139_c0_seq1.mrna1;geneID=comp143139_c0_seq1.path1;Name=comp143139_c0_seq1;Dir=indeterminatecoverage=100.0;identity=89.3;matches=524;mismatches=5;indels=58;unknowns=0;Target=comp143139_c0_seq1 587 1 .;CDS_Target=comp143139_c0_seq1 120 1 .;locus=RLOC_00009380
Chr1	stalkie_big_nohaplotig	exon	88256371	88256899	89	-	.	Parent=comp143139_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	88256838	88256899	.	-	0	Parent=comp143139_c0_seq1.mrna1
Chr1	gffcl	locus	88257158	88257387	.	+	.	ID=RLOC_00009381;geneIDs=comp136750_c0_seq1.path1;transcripts=comp136750_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88257158	88257387	.	+	.	ID=comp136750_c0_seq1.mrna1;geneID=comp136750_c0_seq1.path1;Name=comp136750_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=225;mismatches=5;indels=0;unknowns=0;Target=comp136750_c0_seq1 230 1 .;CDS_Target=comp136750_c0_seq1 228 76 .;locus=RLOC_00009381
Chr1	stalkie_big_nohaplotig	exon	88257158	88257387	97	+	.	Parent=comp136750_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	88257233	88257385	.	+	0	Parent=comp136750_c0_seq1.mrna1
Chr1	gffcl	locus	88257803	88258085	.	-	.	ID=RLOC_00009382;geneIDs=comp143974_c0_seq1.path1;transcripts=comp143974_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88257803	88258085	.	-	.	ID=comp143974_c0_seq1.mrna1;geneID=comp143974_c0_seq1.path1;Name=comp143974_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=277;mismatches=6;indels=0;unknowns=0;Target=comp143974_c0_seq1 283 1 .;CDS_Target=comp143974_c0_seq1 6 1 .;locus=RLOC_00009382
Chr1	stalkie_big_nohaplotig	exon	88257803	88258085	97	-	.	Parent=comp143974_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	88258080	88258085	.	-	0	Parent=comp143974_c0_seq1.mrna1
Chr1	gffcl	locus	88259512	88259828	.	-	.	ID=RLOC_00009383;geneIDs=comp118538_c0_seq1.path1;transcripts=comp118538_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88259512	88259828	.	-	.	ID=comp118538_c0_seq1.mrna1;geneID=comp118538_c0_seq1.path1;Name=comp118538_c0_seq1;Dir=indeterminatecoverage=99.4;identity=96.3;matches=309;mismatches=5;indels=7;unknowns=0;Target=comp118538_c0_seq1 320 3 .;CDS_Target=comp118538_c0_seq1 264 193 .;locus=RLOC_00009383
Chr1	stalkie_big_nohaplotig	exon	88259512	88259828	96	-	.	Parent=comp118538_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	88259568	88259639	.	-	0	Parent=comp118538_c0_seq1.mrna1
Chr1	gffcl	locus	88432164	88450825	.	+	.	ID=RLOC_00009385;geneIDs=FBgn0023526.1.path1;transcripts=FBgn0023526.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88432164	88450825	.	+	.	ID=FBgn0023526.1.mrna1;geneID=FBgn0023526.1.path1;Name=FBgn0023526.1;Dir=sensecoverage=100.0;identity=99.9;matches=1136;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009385
Chr1	stalkie_big_nohaplotig	exon	88432164	88432528	100	+	.	Parent=FBgn0023526.1.mrna1;Target=FBgn0023526.1 1 365 +
Chr1	stalkie_big_nohaplotig	exon	88450054	88450825	99	+	.	Parent=FBgn0023526.1.mrna1;Target=FBgn0023526.1 366 1137 +
Chr1	stalkie_big_nohaplotig	CDS	88432164	88432528	.	+	0	Parent=FBgn0023526.1.mrna1;Target=FBgn0023526.1 1 365 +
Chr1	stalkie_big_nohaplotig	CDS	88450054	88450825	.	+	1	Parent=FBgn0023526.1.mrna1;Target=FBgn0023526.1 366 1137 +
Chr1	gffcl	locus	88435324	88436788	.	+	.	ID=RLOC_00009386;geneIDs=comp146738_c0_seq1.path1;transcripts=comp146738_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88435324	88436788	.	+	.	ID=comp146738_c0_seq1.mrna1;geneID=comp146738_c0_seq1.path1;Name=comp146738_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.7;matches=1461;mismatches=4;indels=0;unknowns=0;Target=comp146738_c0_seq1 1465 1 .;CDS_Target=comp146738_c0_seq1 937 707 .;locus=RLOC_00009386
Chr1	stalkie_big_nohaplotig	exon	88435324	88436788	99	+	.	Parent=comp146738_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	88436030	88436260	.	+	0	Parent=comp146738_c0_seq1.mrna1
Chr1	gffcl	locus	88480094	88480794	.	-	.	ID=RLOC_00009388;geneIDs=comp150659_c0_seq1.path1;transcripts=comp150659_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88480094	88480794	.	-	.	ID=comp150659_c0_seq1.mrna1;geneID=comp150659_c0_seq1.path1;Name=comp150659_c0_seq1;Dir=antisensecoverage=100.0;identity=96.2;matches=633;mismatches=0;indels=25;unknowns=0;Target=comp150659_c0_seq1 473 658 .;locus=RLOC_00009388
Chr1	stalkie_big_nohaplotig	exon	88480094	88480446	93	-	.	Parent=comp150659_c0_seq1.mrna1;Target=comp150659_c0_seq1 1 378 -
Chr1	stalkie_big_nohaplotig	exon	88480515	88480794	100	-	.	Parent=comp150659_c0_seq1.mrna1;Target=comp150659_c0_seq1 379 658 -
Chr1	stalkie_big_nohaplotig	CDS	88480609	88480794	.	-	0	Parent=comp150659_c0_seq1.mrna1
Chr1	gffcl	locus	88534555	88536604	.	-	.	ID=RLOC_00009389;geneIDs=comp151247_c0_seq1.path1;transcripts=comp151247_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88534555	88536604	.	-	.	ID=comp151247_c0_seq1.mrna1;geneID=comp151247_c0_seq1.path1;Name=comp151247_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.7;matches=2044;mismatches=6;indels=0;unknowns=0;Target=comp151247_c0_seq1 2050 1 .;CDS_Target=comp151247_c0_seq1 1783 1604 .;locus=RLOC_00009389
Chr1	stalkie_big_nohaplotig	exon	88534555	88536604	99	-	.	Parent=comp151247_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	88534822	88535001	.	-	0	Parent=comp151247_c0_seq1.mrna1
Chr1	gffcl	locus	88541452	88541788	.	+	.	ID=RLOC_00009390;geneIDs=comp146641_c0_seq1.path1;transcripts=comp146641_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88541452	88541788	.	+	.	ID=comp146641_c0_seq1.mrna1;geneID=comp146641_c0_seq1.path1;Name=comp146641_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=274;mismatches=3;indels=0;unknowns=0;locus=RLOC_00009390
Chr1	stalkie_big_nohaplotig	exon	88541452	88541641	98	+	.	Parent=comp146641_c0_seq1.mrna1;Target=comp146641_c0_seq1 88 277 -
Chr1	stalkie_big_nohaplotig	exon	88541702	88541788	98	+	.	Parent=comp146641_c0_seq1.mrna1;Target=comp146641_c0_seq1 1 87 -
Chr1	stalkie_big_nohaplotig	CDS	88541452	88541641	.	+	0	Parent=comp146641_c0_seq1.mrna1;Target=comp146641_c0_seq1 88 277 .
Chr1	stalkie_big_nohaplotig	CDS	88541702	88541715	.	+	2	Parent=comp146641_c0_seq1.mrna1;Target=comp146641_c0_seq1 74 87 .
Chr1	gffcl	locus	88626768	88630679	.	+	.	ID=RLOC_00009391;geneIDs=FBgn0023528.1.path1;transcripts=FBgn0023528.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88626768	88630679	.	+	.	ID=FBgn0023528.1.mrna1;geneID=FBgn0023528.1.path1;Name=FBgn0023528.1;Dir=sensecoverage=100.0;identity=100.0;matches=1191;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009391
Chr1	stalkie_big_nohaplotig	exon	88626768	88626965	100	+	.	Parent=FBgn0023528.1.mrna1;Target=FBgn0023528.1 1 198 +
Chr1	stalkie_big_nohaplotig	exon	88629301	88629417	100	+	.	Parent=FBgn0023528.1.mrna1;Target=FBgn0023528.1 199 315 +
Chr1	stalkie_big_nohaplotig	exon	88629494	88629745	100	+	.	Parent=FBgn0023528.1.mrna1;Target=FBgn0023528.1 316 567 +
Chr1	stalkie_big_nohaplotig	exon	88629807	88629881	100	+	.	Parent=FBgn0023528.1.mrna1;Target=FBgn0023528.1 568 642 +
Chr1	stalkie_big_nohaplotig	exon	88629936	88630227	100	+	.	Parent=FBgn0023528.1.mrna1;Target=FBgn0023528.1 643 934 +
Chr1	stalkie_big_nohaplotig	exon	88630295	88630443	100	+	.	Parent=FBgn0023528.1.mrna1;Target=FBgn0023528.1 935 1083 +
Chr1	stalkie_big_nohaplotig	exon	88630502	88630580	100	+	.	Parent=FBgn0023528.1.mrna1;Target=FBgn0023528.1 1084 1162 +
Chr1	stalkie_big_nohaplotig	exon	88630651	88630679	100	+	.	Parent=FBgn0023528.1.mrna1;Target=FBgn0023528.1 1163 1191 +
Chr1	stalkie_big_nohaplotig	CDS	88626768	88626965	.	+	0	Parent=FBgn0023528.1.mrna1;Target=FBgn0023528.1 1 198 +
Chr1	stalkie_big_nohaplotig	CDS	88629301	88629417	.	+	0	Parent=FBgn0023528.1.mrna1;Target=FBgn0023528.1 199 315 +
Chr1	stalkie_big_nohaplotig	CDS	88629494	88629745	.	+	0	Parent=FBgn0023528.1.mrna1;Target=FBgn0023528.1 316 567 +
Chr1	stalkie_big_nohaplotig	CDS	88629807	88629881	.	+	0	Parent=FBgn0023528.1.mrna1;Target=FBgn0023528.1 568 642 +
Chr1	stalkie_big_nohaplotig	CDS	88629936	88630227	.	+	0	Parent=FBgn0023528.1.mrna1;Target=FBgn0023528.1 643 934 +
Chr1	stalkie_big_nohaplotig	CDS	88630295	88630443	.	+	2	Parent=FBgn0023528.1.mrna1;Target=FBgn0023528.1 935 1083 +
Chr1	stalkie_big_nohaplotig	CDS	88630502	88630580	.	+	0	Parent=FBgn0023528.1.mrna1;Target=FBgn0023528.1 1084 1162 +
Chr1	stalkie_big_nohaplotig	CDS	88630651	88630679	.	+	2	Parent=FBgn0023528.1.mrna1;Target=FBgn0023528.1 1163 1191 +
Chr1	gffcl	locus	88632281	88633959	.	-	.	ID=RLOC_00009392;geneIDs=FBgn0023527.1.path1;transcripts=FBgn0023527.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88632281	88633959	.	-	.	ID=FBgn0023527.1.mrna1;geneID=FBgn0023527.1.path1;Name=FBgn0023527.1;Dir=sensecoverage=100.0;identity=99.9;matches=1568;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009392
Chr1	stalkie_big_nohaplotig	exon	88632281	88633134	99	-	.	Parent=FBgn0023527.1.mrna1;Target=FBgn0023527.1 716 1569 +
Chr1	stalkie_big_nohaplotig	exon	88633189	88633807	100	-	.	Parent=FBgn0023527.1.mrna1;Target=FBgn0023527.1 97 715 +
Chr1	stalkie_big_nohaplotig	exon	88633864	88633959	100	-	.	Parent=FBgn0023527.1.mrna1;Target=FBgn0023527.1 1 96 +
Chr1	stalkie_big_nohaplotig	CDS	88632281	88633134	.	-	2	Parent=FBgn0023527.1.mrna1;Target=FBgn0023527.1 716 1569 +
Chr1	stalkie_big_nohaplotig	CDS	88633189	88633807	.	-	0	Parent=FBgn0023527.1.mrna1;Target=FBgn0023527.1 97 715 +
Chr1	stalkie_big_nohaplotig	CDS	88633864	88633959	.	-	0	Parent=FBgn0023527.1.mrna1;Target=FBgn0023527.1 1 96 +
Chr1	gffcl	locus	88657906	88658261	.	+	.	ID=RLOC_00009393;geneIDs=FBgn0040890.1.path1;transcripts=FBgn0040890.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88657906	88658261	.	+	.	ID=FBgn0040890.1.mrna1;geneID=FBgn0040890.1.path1;Name=FBgn0040890.1;Dir=sensecoverage=100.0;identity=100.0;matches=246;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009393
Chr1	stalkie_big_nohaplotig	exon	88657906	88657938	100	+	.	Parent=FBgn0040890.1.mrna1;Target=FBgn0040890.1 1 33 +
Chr1	stalkie_big_nohaplotig	exon	88657995	88658104	100	+	.	Parent=FBgn0040890.1.mrna1;Target=FBgn0040890.1 34 143 +
Chr1	stalkie_big_nohaplotig	exon	88658159	88658261	100	+	.	Parent=FBgn0040890.1.mrna1;Target=FBgn0040890.1 144 246 +
Chr1	stalkie_big_nohaplotig	CDS	88657906	88657938	.	+	0	Parent=FBgn0040890.1.mrna1;Target=FBgn0040890.1 1 33 +
Chr1	stalkie_big_nohaplotig	CDS	88657995	88658104	.	+	0	Parent=FBgn0040890.1.mrna1;Target=FBgn0040890.1 34 143 +
Chr1	stalkie_big_nohaplotig	CDS	88658159	88658261	.	+	1	Parent=FBgn0040890.1.mrna1;Target=FBgn0040890.1 144 246 +
Chr1	gffcl	locus	88697702	88699254	.	-	.	ID=RLOC_00009394;geneIDs=ORF659.path3;transcripts=ORF659.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	88697702	88699254	.	-	.	ID=ORF659.mrna3;geneID=ORF659.path3;Name=ORF659;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1551;mismatches=2;indels=1;unknowns=0;Target=ORF659 1554 1 .;CDS_Target=ORF659 107 3 .;locus=RLOC_00009394
Chr1	stalkie_big_nohaplotig	exon	88697702	88699254	99	-	.	Parent=ORF659.mrna3
Chr1	stalkie_big_nohaplotig	CDS	88699149	88699252	.	-	0	Parent=ORF659.mrna3
Chr1	gffcl	locus	88751643	88753261	.	-	.	ID=RLOC_00009397;geneIDs=comp156265_c1_seq1.path1;transcripts=comp156265_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88751643	88753261	.	-	.	ID=comp156265_c1_seq1.mrna1;geneID=comp156265_c1_seq1.path1;Name=comp156265_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1609;mismatches=10;indels=0;unknowns=0;Target=comp156265_c1_seq1 1619 1 .;CDS_Target=comp156265_c1_seq1 293 111 .;locus=RLOC_00009397
Chr1	stalkie_big_nohaplotig	exon	88751643	88753261	99	-	.	Parent=comp156265_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	88752969	88753151	.	-	0	Parent=comp156265_c1_seq1.mrna1
Chr1	gffcl	locus	88760795	88761504	.	+	.	ID=RLOC_00009398;geneIDs=comp147765_c1_seq1.path1;transcripts=comp147765_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88760795	88761504	.	+	.	ID=comp147765_c1_seq1.mrna1;geneID=comp147765_c1_seq1.path1;Name=comp147765_c1_seq1;Dir=indeterminatecoverage=90.2;identity=98.1;matches=606;mismatches=5;indels=7;unknowns=99;Target=comp147765_c1_seq1 795 79 .;CDS_Target=comp147765_c1_seq1 81 79 .;locus=RLOC_00009398
Chr1	stalkie_big_nohaplotig	exon	88760795	88761504	98	+	.	Parent=comp147765_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	88760795	88760797	.	+	0	Parent=comp147765_c1_seq1.mrna1
Chr1	gffcl	locus	88762019	88764091	.	+	.	ID=RLOC_00009399;geneIDs=FBgn0027621.1.path1;transcripts=FBgn0027621.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88762019	88764091	.	+	.	ID=FBgn0027621.1.mrna1;geneID=FBgn0027621.1.path1;Name=FBgn0027621.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=2066;mismatches=1;indels=12;unknowns=0;Target=FBgn0027621.1 2073 1 .;locus=RLOC_00009399
Chr1	stalkie_big_nohaplotig	exon	88762019	88764091	99	+	.	Parent=FBgn0027621.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	88762019	88764091	.	+	0	Parent=FBgn0027621.1.mrna1
Chr1	gffcl	locus	88780351	88781567	.	+	.	ID=RLOC_00009400;geneIDs=comp151923_c0_seq1.path1;transcripts=comp151923_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88780351	88781567	.	+	.	ID=comp151923_c0_seq1.mrna1;geneID=comp151923_c0_seq1.path1;Name=comp151923_c0_seq1;Dir=indeterminatecoverage=98.2;identity=99.7;matches=1214;mismatches=3;indels=1;unknowns=0;Target=comp151923_c0_seq1 1240 23 .;CDS_Target=comp151923_c0_seq1 648 544 .;locus=RLOC_00009400
Chr1	stalkie_big_nohaplotig	exon	88780351	88781567	99	+	.	Parent=comp151923_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	88780872	88780976	.	+	0	Parent=comp151923_c0_seq1.mrna1
Chr1	gffcl	locus	88786051	88786601	.	+	.	ID=RLOC_00009401;geneIDs=comp145746_c0_seq1.path1;transcripts=comp145746_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88786051	88786601	.	+	.	ID=comp145746_c0_seq1.mrna1;geneID=comp145746_c0_seq1.path1;Name=comp145746_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.6;matches=532;mismatches=5;indels=14;unknowns=0;Target=comp145746_c0_seq1 537 1 .;CDS_Target=comp145746_c0_seq1 82 2 .;locus=RLOC_00009401
Chr1	stalkie_big_nohaplotig	exon	88786051	88786601	96	+	.	Parent=comp145746_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	88786052	88786132	.	+	0	Parent=comp145746_c0_seq1.mrna1
Chr1	gffcl	locus	88787040	88789053	.	-	.	ID=RLOC_00009402;geneIDs=FBgn0027291.1.path1,comp151493_c0_seq1.path1;transcripts=FBgn0027291.1.mrna1,comp151493_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88787040	88789053	.	-	.	ID=FBgn0027291.1.mrna1;geneID=FBgn0027291.1.path1;Name=FBgn0027291.1;Dir=sensecoverage=100.0;identity=99.7;matches=1080;mismatches=3;indels=0;unknowns=0;locus=RLOC_00009402
Chr1	stalkie_big_nohaplotig	exon	88787040	88787261	99	-	.	Parent=FBgn0027291.1.mrna1;Target=FBgn0027291.1 862 1083 +
Chr1	stalkie_big_nohaplotig	exon	88787315	88787428	100	-	.	Parent=FBgn0027291.1.mrna1;Target=FBgn0027291.1 748 861 +
Chr1	stalkie_big_nohaplotig	exon	88787489	88787624	99	-	.	Parent=FBgn0027291.1.mrna1;Target=FBgn0027291.1 612 747 +
Chr1	stalkie_big_nohaplotig	exon	88787682	88788076	99	-	.	Parent=FBgn0027291.1.mrna1;Target=FBgn0027291.1 217 611 +
Chr1	stalkie_big_nohaplotig	exon	88788290	88788457	100	-	.	Parent=FBgn0027291.1.mrna1;Target=FBgn0027291.1 49 216 +
Chr1	stalkie_big_nohaplotig	exon	88789006	88789053	100	-	.	Parent=FBgn0027291.1.mrna1;Target=FBgn0027291.1 1 48 +
Chr1	stalkie_big_nohaplotig	CDS	88787040	88787261	.	-	0	Parent=FBgn0027291.1.mrna1;Target=FBgn0027291.1 862 1083 +
Chr1	stalkie_big_nohaplotig	CDS	88787315	88787428	.	-	0	Parent=FBgn0027291.1.mrna1;Target=FBgn0027291.1 748 861 +
Chr1	stalkie_big_nohaplotig	CDS	88787489	88787624	.	-	1	Parent=FBgn0027291.1.mrna1;Target=FBgn0027291.1 612 747 +
Chr1	stalkie_big_nohaplotig	CDS	88787682	88788076	.	-	0	Parent=FBgn0027291.1.mrna1;Target=FBgn0027291.1 217 611 +
Chr1	stalkie_big_nohaplotig	CDS	88788290	88788457	.	-	0	Parent=FBgn0027291.1.mrna1;Target=FBgn0027291.1 49 216 +
Chr1	stalkie_big_nohaplotig	CDS	88789006	88789053	.	-	0	Parent=FBgn0027291.1.mrna1;Target=FBgn0027291.1 1 48 +
Chr1	stalkie_big_nohaplotig	mRNA	88788436	88789050	.	-	.	ID=comp151493_c0_seq1.mrna1;geneID=comp151493_c0_seq1.path1;Name=comp151493_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=557;mismatches=3;indels=0;unknowns=0;locus=RLOC_00009402
Chr1	stalkie_big_nohaplotig	exon	88788436	88788457	100	-	.	Parent=comp151493_c0_seq1.mrna1;Target=comp151493_c0_seq1 1 22 -
Chr1	stalkie_big_nohaplotig	exon	88788513	88789050	99	-	.	Parent=comp151493_c0_seq1.mrna1;Target=comp151493_c0_seq1 23 560 -
Chr1	stalkie_big_nohaplotig	CDS	88788438	88788457	.	-	2	Parent=comp151493_c0_seq1.mrna1;Target=comp151493_c0_seq1 3 22 .
Chr1	stalkie_big_nohaplotig	CDS	88788513	88788573	.	-	0	Parent=comp151493_c0_seq1.mrna1;Target=comp151493_c0_seq1 23 83 .
Chr1	gffcl	locus	88798669	88799205	.	-	.	ID=RLOC_00009403;geneIDs=comp149521_c0_seq1.path1;transcripts=comp149521_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88798669	88799205	.	-	.	ID=comp149521_c0_seq1.mrna1;geneID=comp149521_c0_seq1.path1;Name=comp149521_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=535;mismatches=2;indels=0;unknowns=0;Target=comp149521_c0_seq1 537 1 .;CDS_Target=comp149521_c0_seq1 132 58 .;locus=RLOC_00009403
Chr1	stalkie_big_nohaplotig	exon	88798669	88799205	99	-	.	Parent=comp149521_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	88799074	88799148	.	-	0	Parent=comp149521_c0_seq1.mrna1
Chr1	gffcl	locus	88822654	88823268	.	-	.	ID=RLOC_00009404;geneIDs=comp151493_c0_seq1.path2;transcripts=comp151493_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	88822654	88823268	.	-	.	ID=comp151493_c0_seq1.mrna2;geneID=comp151493_c0_seq1.path2;Name=comp151493_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=557;mismatches=3;indels=0;unknowns=0;locus=RLOC_00009404
Chr1	stalkie_big_nohaplotig	exon	88822654	88822675	100	-	.	Parent=comp151493_c0_seq1.mrna2;Target=comp151493_c0_seq1 1 22 -
Chr1	stalkie_big_nohaplotig	exon	88822731	88823268	99	-	.	Parent=comp151493_c0_seq1.mrna2;Target=comp151493_c0_seq1 23 560 -
Chr1	stalkie_big_nohaplotig	CDS	88822656	88822675	.	-	2	Parent=comp151493_c0_seq1.mrna2;Target=comp151493_c0_seq1 3 22 .
Chr1	stalkie_big_nohaplotig	CDS	88822731	88822791	.	-	0	Parent=comp151493_c0_seq1.mrna2;Target=comp151493_c0_seq1 23 83 .
Chr1	gffcl	locus	88845826	88847160	.	+	.	ID=RLOC_00009405;geneIDs=FBgn0029955.1.path1;transcripts=FBgn0029955.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88845826	88847160	.	+	.	ID=FBgn0029955.1.mrna1;geneID=FBgn0029955.1.path1;Name=FBgn0029955.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1333;mismatches=2;indels=0;unknowns=0;Target=FBgn0029955.1 1335 1 .;locus=RLOC_00009405
Chr1	stalkie_big_nohaplotig	exon	88845826	88847160	99	+	.	Parent=FBgn0029955.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	88845826	88847160	.	+	0	Parent=FBgn0029955.1.mrna1
Chr1	gffcl	locus	88885579	88886913	.	-	.	ID=RLOC_00009406;geneIDs=FBgn0029955.1.path2;transcripts=FBgn0029955.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	88885579	88886913	.	-	.	ID=FBgn0029955.1.mrna2;geneID=FBgn0029955.1.path2;Name=FBgn0029955.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1333;mismatches=2;indels=0;unknowns=0;Target=FBgn0029955.1 1335 1 .;locus=RLOC_00009406
Chr1	stalkie_big_nohaplotig	exon	88885579	88886913	99	-	.	Parent=FBgn0029955.1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	88885579	88886913	.	-	0	Parent=FBgn0029955.1.mrna2
Chr1	gffcl	locus	88933033	88935344	.	-	.	ID=RLOC_00009408;geneIDs=FBgn0029719.1.path1;transcripts=FBgn0029719.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88933033	88935344	.	-	.	ID=FBgn0029719.1.mrna1;geneID=FBgn0029719.1.path1;Name=FBgn0029719.1;Dir=sensecoverage=100.0;identity=99.6;matches=2178;mismatches=9;indels=0;unknowns=0;locus=RLOC_00009408
Chr1	stalkie_big_nohaplotig	exon	88933033	88935004	99	-	.	Parent=FBgn0029719.1.mrna1;Target=FBgn0029719.1 216 2187 +
Chr1	stalkie_big_nohaplotig	exon	88935130	88935344	99	-	.	Parent=FBgn0029719.1.mrna1;Target=FBgn0029719.1 1 215 +
Chr1	stalkie_big_nohaplotig	CDS	88933033	88935004	.	-	1	Parent=FBgn0029719.1.mrna1;Target=FBgn0029719.1 216 2187 +
Chr1	stalkie_big_nohaplotig	CDS	88935130	88935344	.	-	0	Parent=FBgn0029719.1.mrna1;Target=FBgn0029719.1 1 215 +
Chr1	gffcl	locus	88953888	88964428	.	-	.	ID=RLOC_00009410;geneIDs=FBgn0030318.1.path1,comp505179_c0_seq1.path1;transcripts=FBgn0030318.1.mrna1,comp505179_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88953888	88964428	.	-	.	ID=FBgn0030318.1.mrna1;geneID=FBgn0030318.1.path1;Name=FBgn0030318.1;Dir=sensecoverage=100.0;identity=100.0;matches=1284;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009410
Chr1	stalkie_big_nohaplotig	exon	88953888	88954193	100	-	.	Parent=FBgn0030318.1.mrna1;Target=FBgn0030318.1 979 1284 +
Chr1	stalkie_big_nohaplotig	exon	88954259	88954601	100	-	.	Parent=FBgn0030318.1.mrna1;Target=FBgn0030318.1 636 978 +
Chr1	stalkie_big_nohaplotig	exon	88956003	88956108	100	-	.	Parent=FBgn0030318.1.mrna1;Target=FBgn0030318.1 530 635 +
Chr1	stalkie_big_nohaplotig	exon	88956254	88956509	100	-	.	Parent=FBgn0030318.1.mrna1;Target=FBgn0030318.1 274 529 +
Chr1	stalkie_big_nohaplotig	exon	88964156	88964428	100	-	.	Parent=FBgn0030318.1.mrna1;Target=FBgn0030318.1 1 273 +
Chr1	stalkie_big_nohaplotig	CDS	88953888	88954193	.	-	0	Parent=FBgn0030318.1.mrna1;Target=FBgn0030318.1 979 1284 +
Chr1	stalkie_big_nohaplotig	CDS	88954259	88954601	.	-	1	Parent=FBgn0030318.1.mrna1;Target=FBgn0030318.1 636 978 +
Chr1	stalkie_big_nohaplotig	CDS	88956003	88956108	.	-	2	Parent=FBgn0030318.1.mrna1;Target=FBgn0030318.1 530 635 +
Chr1	stalkie_big_nohaplotig	CDS	88956254	88956509	.	-	0	Parent=FBgn0030318.1.mrna1;Target=FBgn0030318.1 274 529 +
Chr1	stalkie_big_nohaplotig	CDS	88964156	88964428	.	-	0	Parent=FBgn0030318.1.mrna1;Target=FBgn0030318.1 1 273 +
Chr1	stalkie_big_nohaplotig	mRNA	88963604	88964179	.	-	.	ID=comp505179_c0_seq1.mrna1;geneID=comp505179_c0_seq1.path1;Name=comp505179_c0_seq1;Dir=indeterminatecoverage=98.6;identity=99.8;matches=575;mismatches=1;indels=0;unknowns=0;Target=comp505179_c0_seq1 576 1 .;CDS_Target=comp505179_c0_seq1 412 296 .;locus=RLOC_00009410
Chr1	stalkie_big_nohaplotig	exon	88963604	88964179	99	-	.	Parent=comp505179_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	88963768	88963884	.	-	0	Parent=comp505179_c0_seq1.mrna1
Chr1	gffcl	locus	88976515	88978246	.	-	.	ID=RLOC_00009411;geneIDs=comp124689_c0_seq1.path1;transcripts=comp124689_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88976515	88978246	.	-	.	ID=comp124689_c0_seq1.mrna1;geneID=comp124689_c0_seq1.path1;Name=comp124689_c0_seq1;Dir=antisensecoverage=98.1;identity=99.8;matches=1610;mismatches=4;indels=0;unknowns=0;locus=RLOC_00009411
Chr1	stalkie_big_nohaplotig	exon	88976515	88977318	99	-	.	Parent=comp124689_c0_seq1.mrna1;Target=comp124689_c0_seq1 32 835 -
Chr1	stalkie_big_nohaplotig	exon	88977376	88977591	99	-	.	Parent=comp124689_c0_seq1.mrna1;Target=comp124689_c0_seq1 836 1051 -
Chr1	stalkie_big_nohaplotig	exon	88977653	88978246	99	-	.	Parent=comp124689_c0_seq1.mrna1;Target=comp124689_c0_seq1 1052 1645 -
Chr1	stalkie_big_nohaplotig	CDS	88977226	88977318	.	-	0	Parent=comp124689_c0_seq1.mrna1;Target=comp124689_c0_seq1 743 835 .
Chr1	stalkie_big_nohaplotig	CDS	88977376	88977591	.	-	0	Parent=comp124689_c0_seq1.mrna1;Target=comp124689_c0_seq1 836 1051 .
Chr1	stalkie_big_nohaplotig	CDS	88977653	88977697	.	-	0	Parent=comp124689_c0_seq1.mrna1;Target=comp124689_c0_seq1 1052 1096 .
Chr1	gffcl	locus	88978265	88979218	.	-	.	ID=RLOC_00009412;geneIDs=comp151532_c0_seq1.path1;transcripts=comp151532_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88978265	88979218	.	-	.	ID=comp151532_c0_seq1.mrna1;geneID=comp151532_c0_seq1.path1;Name=comp151532_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.9;matches=953;mismatches=1;indels=0;unknowns=0;Target=comp151532_c0_seq1 954 1 .;CDS_Target=comp151532_c0_seq1 429 214 .;locus=RLOC_00009412
Chr1	stalkie_big_nohaplotig	exon	88978265	88979218	99	-	.	Parent=comp151532_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	88978790	88979005	.	-	0	Parent=comp151532_c0_seq1.mrna1
Chr1	gffcl	locus	88979958	88980984	.	+	.	ID=RLOC_00009413;geneIDs=comp116807_c0_seq1.path1;transcripts=comp116807_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88979958	88980984	.	+	.	ID=comp116807_c0_seq1.mrna1;geneID=comp116807_c0_seq1.path1;Name=comp116807_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1027;mismatches=0;indels=0;unknowns=0;Target=comp116807_c0_seq1 1027 1 .;CDS_Target=comp116807_c0_seq1 898 794 .;locus=RLOC_00009413
Chr1	stalkie_big_nohaplotig	exon	88979958	88980984	100	+	.	Parent=comp116807_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	88980751	88980855	.	+	0	Parent=comp116807_c0_seq1.mrna1
Chr1	gffcl	locus	88981856	88982451	.	-	.	ID=RLOC_00009414;geneIDs=comp74977_c0_seq1.path1;transcripts=comp74977_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88981856	88982451	.	-	.	ID=comp74977_c0_seq1.mrna1;geneID=comp74977_c0_seq1.path1;Name=comp74977_c0_seq1;Dir=sensecoverage=99.6;identity=100.0;matches=479;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009414
Chr1	stalkie_big_nohaplotig	exon	88981856	88982014	100	-	.	Parent=comp74977_c0_seq1.mrna1;Target=comp74977_c0_seq1 321 479 +
Chr1	stalkie_big_nohaplotig	exon	88982072	88982287	100	-	.	Parent=comp74977_c0_seq1.mrna1;Target=comp74977_c0_seq1 105 320 +
Chr1	stalkie_big_nohaplotig	exon	88982348	88982451	100	-	.	Parent=comp74977_c0_seq1.mrna1;Target=comp74977_c0_seq1 1 104 +
Chr1	stalkie_big_nohaplotig	CDS	88981916	88982014	.	-	0	Parent=comp74977_c0_seq1.mrna1;Target=comp74977_c0_seq1 321 419 +
Chr1	stalkie_big_nohaplotig	CDS	88982072	88982287	.	-	0	Parent=comp74977_c0_seq1.mrna1;Target=comp74977_c0_seq1 105 320 +
Chr1	stalkie_big_nohaplotig	CDS	88982348	88982392	.	-	0	Parent=comp74977_c0_seq1.mrna1;Target=comp74977_c0_seq1 60 104 +
Chr1	gffcl	locus	88983666	88984376	.	-	.	ID=RLOC_00009415;geneIDs=comp143744_c0_seq1.path1;transcripts=comp143744_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88983666	88984376	.	-	.	ID=comp143744_c0_seq1.mrna1;geneID=comp143744_c0_seq1.path1;Name=comp143744_c0_seq1;Dir=sensecoverage=97.0;identity=100.0;matches=574;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009415
Chr1	stalkie_big_nohaplotig	exon	88983666	88983860	100	-	.	Parent=comp143744_c0_seq1.mrna1;Target=comp143744_c0_seq1 380 574 +
Chr1	stalkie_big_nohaplotig	exon	88983939	88984169	100	-	.	Parent=comp143744_c0_seq1.mrna1;Target=comp143744_c0_seq1 149 379 +
Chr1	stalkie_big_nohaplotig	exon	88984229	88984376	100	-	.	Parent=comp143744_c0_seq1.mrna1;Target=comp143744_c0_seq1 1 148 +
Chr1	stalkie_big_nohaplotig	CDS	88983756	88983860	.	-	0	Parent=comp143744_c0_seq1.mrna1;Target=comp143744_c0_seq1 380 484 +
Chr1	stalkie_big_nohaplotig	CDS	88983939	88984169	.	-	0	Parent=comp143744_c0_seq1.mrna1;Target=comp143744_c0_seq1 149 379 +
Chr1	stalkie_big_nohaplotig	CDS	88984229	88984273	.	-	0	Parent=comp143744_c0_seq1.mrna1;Target=comp143744_c0_seq1 104 148 +
Chr1	gffcl	locus	88989055	88989668	.	-	.	ID=RLOC_00009416;geneIDs=comp163323_c3_seq1.path1;transcripts=comp163323_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	88989055	88989668	.	-	.	ID=comp163323_c3_seq1.mrna1;geneID=comp163323_c3_seq1.path1;Name=comp163323_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=612;mismatches=2;indels=0;unknowns=0;Target=comp163323_c3_seq1 614 1 .;CDS_Target=comp163323_c3_seq1 614 513 .;locus=RLOC_00009416
Chr1	stalkie_big_nohaplotig	exon	88989055	88989668	99	-	.	Parent=comp163323_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	88989055	88989156	.	-	0	Parent=comp163323_c3_seq1.mrna1
Chr1	gffcl	locus	89003969	89135908	.	+	.	ID=RLOC_00009417;geneIDs=comp97874_c0_seq1.path1,comp153416_c0_seq1.path1;transcripts=comp97874_c0_seq1.mrna1,comp153416_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89003969	89135908	.	+	.	ID=comp97874_c0_seq1.mrna1;geneID=comp97874_c0_seq1.path1;Name=comp97874_c0_seq1;Dir=indeterminatecoverage=78.3;identity=97.1;matches=544;mismatches=8;indels=8;unknowns=0;Target=comp97874_c0_seq1 764 645 .;locus=RLOC_00009417
Chr1	stalkie_big_nohaplotig	exon	89003969	89003975	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 173 167 .
Chr1	stalkie_big_nohaplotig	exon	89010048	89010055	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 181 174 .
Chr1	stalkie_big_nohaplotig	exon	89012561	89012563	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 184 182 .
Chr1	stalkie_big_nohaplotig	exon	89018931	89018934	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 188 185 .
Chr1	stalkie_big_nohaplotig	exon	89027009	89027013	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 193 189 .
Chr1	stalkie_big_nohaplotig	exon	89034405	89034415	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 204 194 .
Chr1	stalkie_big_nohaplotig	exon	89038935	89038939	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 209 205 .
Chr1	stalkie_big_nohaplotig	exon	89044923	89044926	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 213 210 .
Chr1	stalkie_big_nohaplotig	exon	89051666	89051671	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 219 214 .
Chr1	stalkie_big_nohaplotig	exon	89056057	89056061	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 224 220 .
Chr1	stalkie_big_nohaplotig	exon	89056639	89056646	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 232 225 .
Chr1	stalkie_big_nohaplotig	exon	89058738	89058762	50	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 251 233 .
Chr1	stalkie_big_nohaplotig	exon	89059712	89059717	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 257 252 .
Chr1	stalkie_big_nohaplotig	exon	89066941	89066942	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 259 258 .
Chr1	stalkie_big_nohaplotig	exon	89074712	89074719	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 267 260 .
Chr1	stalkie_big_nohaplotig	exon	89079993	89079998	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 273 268 .
Chr1	stalkie_big_nohaplotig	exon	89080015	89080017	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 321 319 .
Chr1	stalkie_big_nohaplotig	exon	89080405	89080409	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 326 322 .
Chr1	stalkie_big_nohaplotig	exon	89084140	89084148	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 335 327 .
Chr1	stalkie_big_nohaplotig	exon	89090155	89090156	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 337 336 .
Chr1	stalkie_big_nohaplotig	exon	89100997	89100998	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 339 338 .
Chr1	stalkie_big_nohaplotig	exon	89112113	89112116	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 343 340 .
Chr1	stalkie_big_nohaplotig	exon	89118242	89118243	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 345 344 .
Chr1	stalkie_big_nohaplotig	exon	89123824	89123826	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 348 346 .
Chr1	stalkie_big_nohaplotig	exon	89126107	89126112	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 354 349 .
Chr1	stalkie_big_nohaplotig	exon	89131410	89131413	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 358 355 .
Chr1	stalkie_big_nohaplotig	exon	89135369	89135377	100	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 367 359 .
Chr1	stalkie_big_nohaplotig	exon	89135512	89135908	99	+	.	Parent=comp97874_c0_seq1.mrna1;Target=comp97874_c0_seq1 764 368 .
Chr1	stalkie_big_nohaplotig	CDS	89135789	89135908	.	+	0	Parent=comp97874_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89038924	89039777	.	+	.	ID=comp153416_c0_seq1.mrna1;geneID=comp153416_c0_seq1.path1;Name=comp153416_c0_seq1;Dir=indeterminatecoverage=59.9;identity=100.0;matches=854;mismatches=0;indels=0;unknowns=0;Target=comp153416_c0_seq1 854 1 .;CDS_Target=comp153416_c0_seq1 852 607 .;locus=RLOC_00009417
Chr1	stalkie_big_nohaplotig	exon	89038924	89039777	100	+	.	Parent=comp153416_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	89039530	89039775	.	+	0	Parent=comp153416_c0_seq1.mrna1
Chr1	gffcl	locus	89019072	89021560	.	-	.	ID=RLOC_00009418;geneIDs=comp156657_c0_seq1.path1;transcripts=comp156657_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89019072	89021560	.	-	.	ID=comp156657_c0_seq1.mrna1;geneID=comp156657_c0_seq1.path1;Name=comp156657_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=2362;mismatches=12;indels=1;unknowns=0;Target=comp156657_c0_seq1 698 835 +;locus=RLOC_00009418
Chr1	stalkie_big_nohaplotig	exon	89019072	89020855	99	-	.	Parent=comp156657_c0_seq1.mrna1;Target=comp156657_c0_seq1 591 2375 +
Chr1	stalkie_big_nohaplotig	exon	89020971	89021560	100	-	.	Parent=comp156657_c0_seq1.mrna1;Target=comp156657_c0_seq1 1 590 +
Chr1	stalkie_big_nohaplotig	CDS	89020612	89020748	.	-	0	Parent=comp156657_c0_seq1.mrna1
Chr1	gffcl	locus	89030042	89030973	.	-	.	ID=RLOC_00009419;geneIDs=comp143344_c0_seq1.path1;transcripts=comp143344_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89030042	89030973	.	-	.	ID=comp143344_c0_seq1.mrna1;geneID=comp143344_c0_seq1.path1;Name=comp143344_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=932;mismatches=0;indels=0;unknowns=0;Target=comp143344_c0_seq1 932 1 .;CDS_Target=comp143344_c0_seq1 181 2 .;locus=RLOC_00009419
Chr1	stalkie_big_nohaplotig	exon	89030042	89030973	100	-	.	Parent=comp143344_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	89030793	89030972	.	-	0	Parent=comp143344_c0_seq1.mrna1
Chr1	gffcl	locus	89031180	89038568	.	+	.	ID=RLOC_00009420;geneIDs=comp117613_c0_seq1.path1;transcripts=comp117613_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89031180	89038568	.	+	.	ID=comp117613_c0_seq1.mrna1;geneID=comp117613_c0_seq1.path1;Name=comp117613_c0_seq1;Dir=antisensecoverage=91.6;identity=100.0;matches=373;mismatches=0;indels=0;unknowns=0;Target=comp117613_c0_seq1 271 342 .;locus=RLOC_00009420
Chr1	stalkie_big_nohaplotig	exon	89031180	89031483	100	+	.	Parent=comp117613_c0_seq1.mrna1;Target=comp117613_c0_seq1 70 373 -
Chr1	stalkie_big_nohaplotig	exon	89038500	89038568	100	+	.	Parent=comp117613_c0_seq1.mrna1;Target=comp117613_c0_seq1 1 69 -
Chr1	stalkie_big_nohaplotig	CDS	89031211	89031282	.	+	0	Parent=comp117613_c0_seq1.mrna1
Chr1	gffcl	locus	89090975	89092106	.	+	.	ID=RLOC_00009421;geneIDs=FBgn0032354.1.path1;transcripts=FBgn0032354.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89090975	89092106	.	+	.	ID=FBgn0032354.1.mrna1;geneID=FBgn0032354.1.path1;Name=FBgn0032354.1;Dir=sensecoverage=100.0;identity=100.0;matches=1062;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009421
Chr1	stalkie_big_nohaplotig	exon	89090975	89091900	100	+	.	Parent=FBgn0032354.1.mrna1;Target=FBgn0032354.1 1 926 +
Chr1	stalkie_big_nohaplotig	exon	89091971	89092106	100	+	.	Parent=FBgn0032354.1.mrna1;Target=FBgn0032354.1 927 1062 +
Chr1	stalkie_big_nohaplotig	CDS	89090975	89091900	.	+	0	Parent=FBgn0032354.1.mrna1;Target=FBgn0032354.1 1 926 +
Chr1	stalkie_big_nohaplotig	CDS	89091971	89092106	.	+	1	Parent=FBgn0032354.1.mrna1;Target=FBgn0032354.1 927 1062 +
Chr1	gffcl	locus	89123904	89124245	.	-	.	ID=RLOC_00009423;geneIDs=comp145910_c0_seq1.path1;transcripts=comp145910_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89123904	89124245	.	-	.	ID=comp145910_c0_seq1.mrna1;geneID=comp145910_c0_seq1.path1;Name=comp145910_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=337;mismatches=5;indels=0;unknowns=0;Target=comp145910_c0_seq1 342 1 .;CDS_Target=comp145910_c0_seq1 120 1 .;locus=RLOC_00009423
Chr1	stalkie_big_nohaplotig	exon	89123904	89124245	98	-	.	Parent=comp145910_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	89124126	89124245	.	-	0	Parent=comp145910_c0_seq1.mrna1
Chr1	gffcl	locus	89128655	89133992	.	+	.	ID=RLOC_00009424;geneIDs=comp159710_c2_seq1.path1;transcripts=comp159710_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89128655	89133992	.	+	.	ID=comp159710_c2_seq1.mrna1;geneID=comp159710_c2_seq1.path1;Name=comp159710_c2_seq1;Dir=sensecoverage=97.4;identity=100.0;matches=5100;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009424
Chr1	stalkie_big_nohaplotig	exon	89128655	89131181	99	+	.	Parent=comp159710_c2_seq1.mrna1;Target=comp159710_c2_seq1 139 2665 +
Chr1	stalkie_big_nohaplotig	exon	89131238	89131374	100	+	.	Parent=comp159710_c2_seq1.mrna1;Target=comp159710_c2_seq1 2666 2802 +
Chr1	stalkie_big_nohaplotig	exon	89131431	89132028	100	+	.	Parent=comp159710_c2_seq1.mrna1;Target=comp159710_c2_seq1 2803 3400 +
Chr1	stalkie_big_nohaplotig	exon	89132096	89132243	100	+	.	Parent=comp159710_c2_seq1.mrna1;Target=comp159710_c2_seq1 3401 3548 +
Chr1	stalkie_big_nohaplotig	exon	89132301	89133992	99	+	.	Parent=comp159710_c2_seq1.mrna1;Target=comp159710_c2_seq1 3549 5240 +
Chr1	stalkie_big_nohaplotig	CDS	89128657	89131181	.	+	0	Parent=comp159710_c2_seq1.mrna1;Target=comp159710_c2_seq1 141 2665 +
Chr1	stalkie_big_nohaplotig	CDS	89131238	89131374	.	+	1	Parent=comp159710_c2_seq1.mrna1;Target=comp159710_c2_seq1 2666 2802 +
Chr1	stalkie_big_nohaplotig	CDS	89131431	89132028	.	+	2	Parent=comp159710_c2_seq1.mrna1;Target=comp159710_c2_seq1 2803 3400 +
Chr1	stalkie_big_nohaplotig	CDS	89132096	89132243	.	+	1	Parent=comp159710_c2_seq1.mrna1;Target=comp159710_c2_seq1 3401 3548 +
Chr1	stalkie_big_nohaplotig	CDS	89132301	89133653	.	+	0	Parent=comp159710_c2_seq1.mrna1;Target=comp159710_c2_seq1 3549 4901 +
Chr1	gffcl	locus	89136259	89136603	.	-	.	ID=RLOC_00009425;geneIDs=comp145179_c0_seq1.path1,comp162637_c0_seq1.path2;transcripts=comp145179_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89136259	89136584	.	-	.	ID=comp145179_c0_seq1.mrna1;geneID=comp145179_c0_seq1.path1;Name=comp145179_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=326;mismatches=0;indels=1;unknowns=0;Target=comp145179_c0_seq1 327 1 .;CDS_Target=comp145179_c0_seq1 259 191 .;locus=RLOC_00009425
Chr1	stalkie_big_nohaplotig	exon	89136259	89136584	99	-	.	Parent=comp145179_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	89136327	89136395	.	-	0	Parent=comp145179_c0_seq1.mrna1
Chr1	gffcl	locus	89153655	89197346	.	+	.	ID=RLOC_00009426;geneIDs=FBgn0040395.1.path1;transcripts=FBgn0040395.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89153655	89197346	.	+	.	ID=FBgn0040395.1.mrna1;geneID=FBgn0040395.1.path1;Name=FBgn0040395.1;Dir=sensecoverage=100.0;identity=100.0;matches=1305;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009426
Chr1	stalkie_big_nohaplotig	exon	89153655	89154196	100	+	.	Parent=FBgn0040395.1.mrna1;Target=FBgn0040395.1 1 542 +
Chr1	stalkie_big_nohaplotig	exon	89188415	89188791	100	+	.	Parent=FBgn0040395.1.mrna1;Target=FBgn0040395.1 543 919 +
Chr1	stalkie_big_nohaplotig	exon	89188851	89189066	100	+	.	Parent=FBgn0040395.1.mrna1;Target=FBgn0040395.1 920 1135 +
Chr1	stalkie_big_nohaplotig	exon	89189135	89189224	100	+	.	Parent=FBgn0040395.1.mrna1;Target=FBgn0040395.1 1136 1225 +
Chr1	stalkie_big_nohaplotig	exon	89197267	89197346	100	+	.	Parent=FBgn0040395.1.mrna1;Target=FBgn0040395.1 1226 1305 +
Chr1	stalkie_big_nohaplotig	CDS	89153655	89154196	.	+	0	Parent=FBgn0040395.1.mrna1;Target=FBgn0040395.1 1 542 +
Chr1	stalkie_big_nohaplotig	CDS	89188415	89188791	.	+	1	Parent=FBgn0040395.1.mrna1;Target=FBgn0040395.1 543 919 +
Chr1	stalkie_big_nohaplotig	CDS	89188851	89189066	.	+	2	Parent=FBgn0040395.1.mrna1;Target=FBgn0040395.1 920 1135 +
Chr1	stalkie_big_nohaplotig	CDS	89189135	89189224	.	+	2	Parent=FBgn0040395.1.mrna1;Target=FBgn0040395.1 1136 1225 +
Chr1	stalkie_big_nohaplotig	CDS	89197267	89197346	.	+	2	Parent=FBgn0040395.1.mrna1;Target=FBgn0040395.1 1226 1305 +
Chr1	gffcl	locus	89176904	89177931	.	+	.	ID=RLOC_00009427;geneIDs=comp514563_c0_seq1.path1;transcripts=comp514563_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89176904	89177931	.	+	.	ID=comp514563_c0_seq1.mrna1;geneID=comp514563_c0_seq1.path1;Name=comp514563_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=643;mismatches=4;indels=1;unknowns=0;locus=RLOC_00009427
Chr1	stalkie_big_nohaplotig	exon	89176904	89177503	99	+	.	Parent=comp514563_c0_seq1.mrna1;Target=comp514563_c0_seq1 601 1 .
Chr1	stalkie_big_nohaplotig	exon	89177885	89177931	93	+	.	Parent=comp514563_c0_seq1.mrna1;Target=comp514563_c0_seq1 648 602 .
Chr1	stalkie_big_nohaplotig	CDS	89177387	89177503	.	+	0	Parent=comp514563_c0_seq1.mrna1;Target=comp514563_c0_seq1 601 485 .
Chr1	stalkie_big_nohaplotig	CDS	89177885	89177908	.	+	0	Parent=comp514563_c0_seq1.mrna1;Target=comp514563_c0_seq1 625 602 .
Chr1	gffcl	locus	89197652	89198079	.	+	.	ID=RLOC_00009428;geneIDs=comp142746_c0_seq1.path1;transcripts=comp142746_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89197652	89198079	.	+	.	ID=comp142746_c0_seq1.mrna1;geneID=comp142746_c0_seq1.path1;Name=comp142746_c0_seq1;Dir=indeterminatecoverage=95.3;identity=99.8;matches=428;mismatches=0;indels=1;unknowns=0;Target=comp142746_c0_seq1 450 22 .;CDS_Target=comp142746_c0_seq1 91 23 .;locus=RLOC_00009428
Chr1	stalkie_big_nohaplotig	exon	89197652	89198079	99	+	.	Parent=comp142746_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	89197653	89197721	.	+	0	Parent=comp142746_c0_seq1.mrna1
Chr1	gffcl	locus	89198524	89199852	.	-	.	ID=RLOC_00009429;geneIDs=comp150645_c1_seq1.path1;transcripts=comp150645_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89198524	89199852	.	-	.	ID=comp150645_c1_seq1.mrna1;geneID=comp150645_c1_seq1.path1;Name=comp150645_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1327;mismatches=2;indels=0;unknowns=0;Target=comp150645_c1_seq1 1329 1 .;CDS_Target=comp150645_c1_seq1 182 3 .;locus=RLOC_00009429
Chr1	stalkie_big_nohaplotig	exon	89198524	89199852	99	-	.	Parent=comp150645_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	89199671	89199850	.	-	0	Parent=comp150645_c1_seq1.mrna1
Chr1	gffcl	locus	89223248	89227688	.	-	.	ID=RLOC_00009430;geneIDs=FBgn0021742.1.path1,comp156505_c0_seq1.path1;transcripts=FBgn0021742.1.mrna1,comp156505_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89223248	89227687	.	-	.	ID=FBgn0021742.1.mrna1;geneID=FBgn0021742.1.path1;Name=FBgn0021742.1;Dir=sensecoverage=100.0;identity=99.8;matches=1294;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009430
Chr1	stalkie_big_nohaplotig	exon	89223248	89223334	100	-	.	Parent=FBgn0021742.1.mrna1;Target=FBgn0021742.1 1210 1296 +
Chr1	stalkie_big_nohaplotig	exon	89224997	89225685	99	-	.	Parent=FBgn0021742.1.mrna1;Target=FBgn0021742.1 521 1209 +
Chr1	stalkie_big_nohaplotig	exon	89226065	89226195	100	-	.	Parent=FBgn0021742.1.mrna1;Target=FBgn0021742.1 390 520 +
Chr1	stalkie_big_nohaplotig	exon	89226274	89226334	100	-	.	Parent=FBgn0021742.1.mrna1;Target=FBgn0021742.1 329 389 +
Chr1	stalkie_big_nohaplotig	exon	89226394	89226585	100	-	.	Parent=FBgn0021742.1.mrna1;Target=FBgn0021742.1 137 328 +
Chr1	stalkie_big_nohaplotig	exon	89227552	89227687	100	-	.	Parent=FBgn0021742.1.mrna1;Target=FBgn0021742.1 1 136 +
Chr1	stalkie_big_nohaplotig	CDS	89223248	89223334	.	-	0	Parent=FBgn0021742.1.mrna1;Target=FBgn0021742.1 1210 1296 +
Chr1	stalkie_big_nohaplotig	CDS	89224997	89225685	.	-	2	Parent=FBgn0021742.1.mrna1;Target=FBgn0021742.1 521 1209 +
Chr1	stalkie_big_nohaplotig	CDS	89226065	89226195	.	-	1	Parent=FBgn0021742.1.mrna1;Target=FBgn0021742.1 390 520 +
Chr1	stalkie_big_nohaplotig	CDS	89226274	89226334	.	-	2	Parent=FBgn0021742.1.mrna1;Target=FBgn0021742.1 329 389 +
Chr1	stalkie_big_nohaplotig	CDS	89226394	89226585	.	-	2	Parent=FBgn0021742.1.mrna1;Target=FBgn0021742.1 137 328 +
Chr1	stalkie_big_nohaplotig	CDS	89227552	89227687	.	-	0	Parent=FBgn0021742.1.mrna1;Target=FBgn0021742.1 1 136 +
Chr1	stalkie_big_nohaplotig	mRNA	89223248	89227688	.	-	.	ID=comp156505_c0_seq1.mrna1;geneID=comp156505_c0_seq1.path1;Name=comp156505_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=1354;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009430
Chr1	stalkie_big_nohaplotig	exon	89223248	89223334	100	-	.	Parent=comp156505_c0_seq1.mrna1;Target=comp156505_c0_seq1 1270 1356 +
Chr1	stalkie_big_nohaplotig	exon	89224997	89225685	99	-	.	Parent=comp156505_c0_seq1.mrna1;Target=comp156505_c0_seq1 581 1269 +
Chr1	stalkie_big_nohaplotig	exon	89226065	89226195	100	-	.	Parent=comp156505_c0_seq1.mrna1;Target=comp156505_c0_seq1 450 580 +
Chr1	stalkie_big_nohaplotig	exon	89226274	89226585	100	-	.	Parent=comp156505_c0_seq1.mrna1;Target=comp156505_c0_seq1 138 449 +
Chr1	stalkie_big_nohaplotig	exon	89227552	89227688	100	-	.	Parent=comp156505_c0_seq1.mrna1;Target=comp156505_c0_seq1 1 137 +
Chr1	stalkie_big_nohaplotig	CDS	89223248	89223334	.	-	0	Parent=comp156505_c0_seq1.mrna1;Target=comp156505_c0_seq1 1270 1356 +
Chr1	stalkie_big_nohaplotig	CDS	89224997	89225685	.	-	2	Parent=comp156505_c0_seq1.mrna1;Target=comp156505_c0_seq1 581 1269 +
Chr1	stalkie_big_nohaplotig	CDS	89226065	89226080	.	-	0	Parent=comp156505_c0_seq1.mrna1;Target=comp156505_c0_seq1 565 580 +
Chr1	gffcl	locus	89228345	89230552	.	+	.	ID=RLOC_00009431;geneIDs=comp156825_c1_seq1.path1;transcripts=comp156825_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89228345	89230552	.	+	.	ID=comp156825_c1_seq1.mrna1;geneID=comp156825_c1_seq1.path1;Name=comp156825_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=2197;mismatches=11;indels=0;unknowns=0;Target=comp156825_c1_seq1 2208 1 .;CDS_Target=comp156825_c1_seq1 921 751 .;locus=RLOC_00009431
Chr1	stalkie_big_nohaplotig	exon	89228345	89230552	99	+	.	Parent=comp156825_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	89229095	89229265	.	+	0	Parent=comp156825_c1_seq1.mrna1
Chr1	gffcl	locus	89250962	89251888	.	-	.	ID=RLOC_00009432;geneIDs=comp145161_c1_seq1.path1;transcripts=comp145161_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89250962	89251888	.	-	.	ID=comp145161_c1_seq1.mrna1;geneID=comp145161_c1_seq1.path1;Name=comp145161_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=926;mismatches=1;indels=0;unknowns=0;Target=comp145161_c1_seq1 927 1 .;CDS_Target=comp145161_c1_seq1 815 693 .;locus=RLOC_00009432
Chr1	stalkie_big_nohaplotig	exon	89250962	89251888	99	-	.	Parent=comp145161_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	89251074	89251196	.	-	0	Parent=comp145161_c1_seq1.mrna1
Chr1	gffcl	locus	89252149	89257494	.	.	.	ID=RLOC_00009433;geneIDs=FBgn0030261.1.path1,comp134637_c0_seq1.path1;transcripts=FBgn0030261.1.mrna1,comp134637_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89252149	89257494	.	-	.	ID=FBgn0030261.1.mrna1;geneID=FBgn0030261.1.path1;Name=FBgn0030261.1;Dir=sensecoverage=100.0;identity=100.0;matches=501;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009433
Chr1	stalkie_big_nohaplotig	exon	89252149	89252317	100	-	.	Parent=FBgn0030261.1.mrna1;Target=FBgn0030261.1 333 501 +
Chr1	stalkie_big_nohaplotig	exon	89257097	89257211	100	-	.	Parent=FBgn0030261.1.mrna1;Target=FBgn0030261.1 218 332 +
Chr1	stalkie_big_nohaplotig	exon	89257278	89257494	100	-	.	Parent=FBgn0030261.1.mrna1;Target=FBgn0030261.1 1 217 +
Chr1	stalkie_big_nohaplotig	CDS	89252149	89252317	.	-	1	Parent=FBgn0030261.1.mrna1;Target=FBgn0030261.1 333 501 +
Chr1	stalkie_big_nohaplotig	CDS	89257097	89257211	.	-	2	Parent=FBgn0030261.1.mrna1;Target=FBgn0030261.1 218 332 +
Chr1	stalkie_big_nohaplotig	CDS	89257278	89257494	.	-	0	Parent=FBgn0030261.1.mrna1;Target=FBgn0030261.1 1 217 +
Chr1	stalkie_big_nohaplotig	mRNA	89256707	89257117	.	+	.	ID=comp134637_c0_seq1.mrna1;geneID=comp134637_c0_seq1.path1;Name=comp134637_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=406;mismatches=5;indels=7;unknowns=0;Target=comp134637_c0_seq1 418 1 .;CDS_Target=comp134637_c0_seq1 313 173 .;locus=RLOC_00009433
Chr1	stalkie_big_nohaplotig	exon	89256707	89257117	97	+	.	Parent=comp134637_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	89256872	89257012	.	+	0	Parent=comp134637_c0_seq1.mrna1
Chr1	gffcl	locus	89285682	89288267	.	+	.	ID=RLOC_00009435;geneIDs=FBgn0030259.1.path1;transcripts=FBgn0030259.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89285682	89288267	.	+	.	ID=FBgn0030259.1.mrna1;geneID=FBgn0030259.1.path1;Name=FBgn0030259.1;Dir=sensecoverage=100.0;identity=100.0;matches=378;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009435
Chr1	stalkie_big_nohaplotig	exon	89285682	89285835	100	+	.	Parent=FBgn0030259.1.mrna1;Target=FBgn0030259.1 1 154 +
Chr1	stalkie_big_nohaplotig	exon	89286099	89286219	100	+	.	Parent=FBgn0030259.1.mrna1;Target=FBgn0030259.1 155 275 +
Chr1	stalkie_big_nohaplotig	exon	89288165	89288267	100	+	.	Parent=FBgn0030259.1.mrna1;Target=FBgn0030259.1 276 378 +
Chr1	stalkie_big_nohaplotig	CDS	89285682	89285835	.	+	0	Parent=FBgn0030259.1.mrna1;Target=FBgn0030259.1 1 154 +
Chr1	stalkie_big_nohaplotig	CDS	89286099	89286219	.	+	2	Parent=FBgn0030259.1.mrna1;Target=FBgn0030259.1 155 275 +
Chr1	stalkie_big_nohaplotig	CDS	89288165	89288267	.	+	1	Parent=FBgn0030259.1.mrna1;Target=FBgn0030259.1 276 378 +
Chr1	gffcl	locus	89299954	89300662	.	+	.	ID=RLOC_00009436;geneIDs=FBgn0030258.1.path1;transcripts=FBgn0030258.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89299954	89300662	.	+	.	ID=FBgn0030258.1.mrna1;geneID=FBgn0030258.1.path1;Name=FBgn0030258.1;Dir=sensecoverage=100.0;identity=100.0;matches=519;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009436
Chr1	stalkie_big_nohaplotig	exon	89299954	89300089	100	+	.	Parent=FBgn0030258.1.mrna1;Target=FBgn0030258.1 1 136 +
Chr1	stalkie_big_nohaplotig	exon	89300165	89300318	100	+	.	Parent=FBgn0030258.1.mrna1;Target=FBgn0030258.1 137 290 +
Chr1	stalkie_big_nohaplotig	exon	89300434	89300662	100	+	.	Parent=FBgn0030258.1.mrna1;Target=FBgn0030258.1 291 519 +
Chr1	stalkie_big_nohaplotig	CDS	89299954	89300089	.	+	0	Parent=FBgn0030258.1.mrna1;Target=FBgn0030258.1 1 136 +
Chr1	stalkie_big_nohaplotig	CDS	89300165	89300318	.	+	2	Parent=FBgn0030258.1.mrna1;Target=FBgn0030258.1 137 290 +
Chr1	stalkie_big_nohaplotig	CDS	89300434	89300662	.	+	1	Parent=FBgn0030258.1.mrna1;Target=FBgn0030258.1 291 519 +
Chr1	gffcl	locus	89321431	89368973	.	.	.	ID=RLOC_00009438;geneIDs=ORF2531.path1,comp159514_c3_seq1.path1;transcripts=ORF2531.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89322176	89368973	.	-	.	ID=ORF2531.mrna1;geneID=ORF2531.path1;Name=ORF2531;Dir=indeterminatecoverage=93.4;identity=99.9;matches=789;mismatches=0;indels=1;unknowns=0;locus=RLOC_00009438
Chr1	stalkie_big_nohaplotig	exon	89322176	89322947	99	-	.	Parent=ORF2531.mrna1;Target=ORF2531 846 74 .
Chr1	stalkie_big_nohaplotig	exon	89327824	89327826	100	-	.	Parent=ORF2531.mrna1;Target=ORF2531 73 71 .
Chr1	stalkie_big_nohaplotig	exon	89341293	89341294	100	-	.	Parent=ORF2531.mrna1;Target=ORF2531 70 69 .
Chr1	stalkie_big_nohaplotig	exon	89357645	89357651	100	-	.	Parent=ORF2531.mrna1;Target=ORF2531 68 62 .
Chr1	stalkie_big_nohaplotig	exon	89361087	89361088	100	-	.	Parent=ORF2531.mrna1;Target=ORF2531 61 60 .
Chr1	stalkie_big_nohaplotig	exon	89368971	89368973	100	-	.	Parent=ORF2531.mrna1;Target=ORF2531 59 57 .
Chr1	stalkie_big_nohaplotig	CDS	89322176	89322947	.	-	2	Parent=ORF2531.mrna1;Target=ORF2531 846 74 .
Chr1	stalkie_big_nohaplotig	CDS	89327824	89327826	.	-	2	Parent=ORF2531.mrna1;Target=ORF2531 73 71 .
Chr1	stalkie_big_nohaplotig	CDS	89341293	89341294	.	-	1	Parent=ORF2531.mrna1;Target=ORF2531 70 69 .
Chr1	stalkie_big_nohaplotig	CDS	89357645	89357651	.	-	2	Parent=ORF2531.mrna1;Target=ORF2531 68 62 .
Chr1	stalkie_big_nohaplotig	CDS	89361087	89361088	.	-	1	Parent=ORF2531.mrna1;Target=ORF2531 61 60 .
Chr1	stalkie_big_nohaplotig	CDS	89368971	89368972	.	-	0	Parent=ORF2531.mrna1;Target=ORF2531 59 58 .
Chr1	gffcl	locus	89327122	89330188	.	.	.	ID=RLOC_00009439;geneIDs=FBgn0030257.1.path1,comp140032_c0_seq1.path1;transcripts=FBgn0030257.1.mrna1,comp140032_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89327122	89330188	.	+	.	ID=FBgn0030257.1.mrna1;geneID=FBgn0030257.1.path1;Name=FBgn0030257.1;Dir=sensecoverage=100.0;identity=100.0;matches=1662;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009439
Chr1	stalkie_big_nohaplotig	exon	89327122	89327208	100	+	.	Parent=FBgn0030257.1.mrna1;Target=FBgn0030257.1 1 87 +
Chr1	stalkie_big_nohaplotig	exon	89328311	89328609	100	+	.	Parent=FBgn0030257.1.mrna1;Target=FBgn0030257.1 88 386 +
Chr1	stalkie_big_nohaplotig	exon	89328670	89329237	100	+	.	Parent=FBgn0030257.1.mrna1;Target=FBgn0030257.1 387 954 +
Chr1	stalkie_big_nohaplotig	exon	89329293	89329465	100	+	.	Parent=FBgn0030257.1.mrna1;Target=FBgn0030257.1 955 1127 +
Chr1	stalkie_big_nohaplotig	exon	89329525	89329647	100	+	.	Parent=FBgn0030257.1.mrna1;Target=FBgn0030257.1 1128 1250 +
Chr1	stalkie_big_nohaplotig	exon	89329723	89329916	100	+	.	Parent=FBgn0030257.1.mrna1;Target=FBgn0030257.1 1251 1444 +
Chr1	stalkie_big_nohaplotig	exon	89329971	89330188	100	+	.	Parent=FBgn0030257.1.mrna1;Target=FBgn0030257.1 1445 1662 +
Chr1	stalkie_big_nohaplotig	CDS	89327122	89327208	.	+	0	Parent=FBgn0030257.1.mrna1;Target=FBgn0030257.1 1 87 +
Chr1	stalkie_big_nohaplotig	CDS	89328311	89328609	.	+	0	Parent=FBgn0030257.1.mrna1;Target=FBgn0030257.1 88 386 +
Chr1	stalkie_big_nohaplotig	CDS	89328670	89329237	.	+	1	Parent=FBgn0030257.1.mrna1;Target=FBgn0030257.1 387 954 +
Chr1	stalkie_big_nohaplotig	CDS	89329293	89329465	.	+	0	Parent=FBgn0030257.1.mrna1;Target=FBgn0030257.1 955 1127 +
Chr1	stalkie_big_nohaplotig	CDS	89329525	89329647	.	+	1	Parent=FBgn0030257.1.mrna1;Target=FBgn0030257.1 1128 1250 +
Chr1	stalkie_big_nohaplotig	CDS	89329723	89329916	.	+	1	Parent=FBgn0030257.1.mrna1;Target=FBgn0030257.1 1251 1444 +
Chr1	stalkie_big_nohaplotig	CDS	89329971	89330188	.	+	2	Parent=FBgn0030257.1.mrna1;Target=FBgn0030257.1 1445 1662 +
Chr1	stalkie_big_nohaplotig	mRNA	89328005	89328334	.	-	.	ID=comp140032_c0_seq1.mrna1;geneID=comp140032_c0_seq1.path1;Name=comp140032_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=330;mismatches=0;indels=0;unknowns=0;Target=comp140032_c0_seq1 330 1 .;CDS_Target=comp140032_c0_seq1 90 1 .;locus=RLOC_00009439
Chr1	stalkie_big_nohaplotig	exon	89328005	89328334	100	-	.	Parent=comp140032_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	89328245	89328334	.	-	0	Parent=comp140032_c0_seq1.mrna1
Chr1	gffcl	locus	89351063	89725525	.	+	.	ID=RLOC_00009440;geneIDs=FBgn0259241.1.path1,comp160476_c1_seq1.path1;transcripts=FBgn0259241.1.mrna1,comp160476_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89351063	89544458	.	+	.	ID=FBgn0259241.1.mrna1;geneID=FBgn0259241.1.path1;Name=FBgn0259241.1;Dir=sensecoverage=97.1;identity=100.0;matches=728;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009440
Chr1	stalkie_big_nohaplotig	exon	89351063	89351474	100	+	.	Parent=FBgn0259241.1.mrna1;Target=FBgn0259241.1 1 412 +
Chr1	stalkie_big_nohaplotig	exon	89516518	89516712	100	+	.	Parent=FBgn0259241.1.mrna1;Target=FBgn0259241.1 413 607 +
Chr1	stalkie_big_nohaplotig	exon	89544338	89544458	100	+	.	Parent=FBgn0259241.1.mrna1;Target=FBgn0259241.1 608 728 +
Chr1	stalkie_big_nohaplotig	CDS	89351063	89351474	.	+	0	Parent=FBgn0259241.1.mrna1;Target=FBgn0259241.1 1 412 +
Chr1	stalkie_big_nohaplotig	CDS	89516518	89516712	.	+	2	Parent=FBgn0259241.1.mrna1;Target=FBgn0259241.1 413 607 +
Chr1	stalkie_big_nohaplotig	CDS	89544338	89544456	.	+	2	Parent=FBgn0259241.1.mrna1;Target=FBgn0259241.1 608 726 +
Chr1	stalkie_big_nohaplotig	mRNA	89516516	89725525	.	+	.	ID=comp160476_c1_seq1.mrna1;geneID=comp160476_c1_seq1.path1;Name=comp160476_c1_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=969;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009440
Chr1	stalkie_big_nohaplotig	exon	89516516	89516712	100	+	.	Parent=comp160476_c1_seq1.mrna1;Target=comp160476_c1_seq1 1 197 +
Chr1	stalkie_big_nohaplotig	exon	89544338	89544458	100	+	.	Parent=comp160476_c1_seq1.mrna1;Target=comp160476_c1_seq1 198 318 +
Chr1	stalkie_big_nohaplotig	exon	89724875	89725525	100	+	.	Parent=comp160476_c1_seq1.mrna1;Target=comp160476_c1_seq1 319 969 +
Chr1	stalkie_big_nohaplotig	CDS	89516518	89516712	.	+	0	Parent=comp160476_c1_seq1.mrna1;Target=comp160476_c1_seq1 3 197 +
Chr1	stalkie_big_nohaplotig	CDS	89544338	89544458	.	+	0	Parent=comp160476_c1_seq1.mrna1;Target=comp160476_c1_seq1 198 318 +
Chr1	stalkie_big_nohaplotig	CDS	89724875	89725326	.	+	2	Parent=comp160476_c1_seq1.mrna1;Target=comp160476_c1_seq1 319 770 +
Chr1	gffcl	locus	89376602	89377278	.	+	.	ID=RLOC_00009441;geneIDs=comp161472_c1_seq1.path2;transcripts=comp161472_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	89376602	89377278	.	+	.	ID=comp161472_c1_seq1.mrna2;geneID=comp161472_c1_seq1.path2;Name=comp161472_c1_seq1;Dir=indeterminatecoverage=26.0;identity=99.3;matches=672;mismatches=5;indels=0;unknowns=0;Target=comp161472_c1_seq1 2608 1932 .;locus=RLOC_00009441
Chr1	stalkie_big_nohaplotig	exon	89376602	89377278	99	+	.	Parent=comp161472_c1_seq1.mrna2
Chr1	gffcl	locus	89472447	89473554	.	-	.	ID=RLOC_00009442;geneIDs=comp156770_c2_seq1.path1;transcripts=comp156770_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89472447	89473554	.	-	.	ID=comp156770_c2_seq1.mrna1;geneID=comp156770_c2_seq1.path1;Name=comp156770_c2_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1107;mismatches=1;indels=0;unknowns=0;Target=comp156770_c2_seq1 1109 2 .;CDS_Target=comp156770_c2_seq1 797 654 .;locus=RLOC_00009442
Chr1	stalkie_big_nohaplotig	exon	89472447	89473554	99	-	.	Parent=comp156770_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	89472759	89472902	.	-	0	Parent=comp156770_c2_seq1.mrna1
Chr1	gffcl	locus	89530892	89533582	.	-	.	ID=RLOC_00009443;geneIDs=comp158355_c0_seq1.path1;transcripts=comp158355_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89530892	89533582	.	-	.	ID=comp158355_c0_seq1.mrna1;geneID=comp158355_c0_seq1.path1;Name=comp158355_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.6;matches=2687;mismatches=4;indels=8;unknowns=0;Target=comp158355_c0_seq1 2699 1 .;CDS_Target=comp158355_c0_seq1 2536 2180 .;locus=RLOC_00009443
Chr1	stalkie_big_nohaplotig	exon	89530892	89533582	99	-	.	Parent=comp158355_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	89531055	89531411	.	-	0	Parent=comp158355_c0_seq1.mrna1
Chr1	gffcl	locus	89630357	89644212	.	-	.	ID=RLOC_00009445;geneIDs=FBgn0003366.1.path1,comp163081_c0_seq1.path1;transcripts=comp163081_c0_seq1.mrna1,FBgn0003366.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89630357	89644212	.	-	.	ID=comp163081_c0_seq1.mrna1;geneID=comp163081_c0_seq1.path1;Name=comp163081_c0_seq1;Dir=antisensecoverage=99.7;identity=100.0;matches=7196;mismatches=3;indels=0;unknowns=0;locus=RLOC_00009445
Chr1	stalkie_big_nohaplotig	exon	89630357	89631636	99	-	.	Parent=comp163081_c0_seq1.mrna1;Target=comp163081_c0_seq1 1 1280 -
Chr1	stalkie_big_nohaplotig	exon	89636061	89636359	100	-	.	Parent=comp163081_c0_seq1.mrna1;Target=comp163081_c0_seq1 1281 1579 -
Chr1	stalkie_big_nohaplotig	exon	89636421	89640864	100	-	.	Parent=comp163081_c0_seq1.mrna1;Target=comp163081_c0_seq1 1580 6023 -
Chr1	stalkie_big_nohaplotig	exon	89642630	89642750	100	-	.	Parent=comp163081_c0_seq1.mrna1;Target=comp163081_c0_seq1 6024 6144 -
Chr1	stalkie_big_nohaplotig	exon	89642898	89643226	100	-	.	Parent=comp163081_c0_seq1.mrna1;Target=comp163081_c0_seq1 6145 6473 -
Chr1	stalkie_big_nohaplotig	exon	89643301	89643540	99	-	.	Parent=comp163081_c0_seq1.mrna1;Target=comp163081_c0_seq1 6474 6713 -
Chr1	stalkie_big_nohaplotig	exon	89643640	89644059	99	-	.	Parent=comp163081_c0_seq1.mrna1;Target=comp163081_c0_seq1 6714 7133 -
Chr1	stalkie_big_nohaplotig	exon	89644147	89644212	100	-	.	Parent=comp163081_c0_seq1.mrna1;Target=comp163081_c0_seq1 7134 7199 -
Chr1	stalkie_big_nohaplotig	CDS	89631607	89631636	.	-	0	Parent=comp163081_c0_seq1.mrna1;Target=comp163081_c0_seq1 1251 1280 .
Chr1	stalkie_big_nohaplotig	CDS	89636061	89636359	.	-	2	Parent=comp163081_c0_seq1.mrna1;Target=comp163081_c0_seq1 1281 1579 .
Chr1	stalkie_big_nohaplotig	CDS	89636421	89640864	.	-	0	Parent=comp163081_c0_seq1.mrna1;Target=comp163081_c0_seq1 1580 6023 .
Chr1	stalkie_big_nohaplotig	CDS	89642630	89642750	.	-	1	Parent=comp163081_c0_seq1.mrna1;Target=comp163081_c0_seq1 6024 6144 .
Chr1	stalkie_big_nohaplotig	CDS	89642898	89643226	.	-	0	Parent=comp163081_c0_seq1.mrna1;Target=comp163081_c0_seq1 6145 6473 .
Chr1	stalkie_big_nohaplotig	CDS	89643301	89643540	.	-	0	Parent=comp163081_c0_seq1.mrna1;Target=comp163081_c0_seq1 6474 6713 .
Chr1	stalkie_big_nohaplotig	CDS	89643640	89644059	.	-	0	Parent=comp163081_c0_seq1.mrna1;Target=comp163081_c0_seq1 6714 7133 .
Chr1	stalkie_big_nohaplotig	CDS	89644147	89644212	.	-	0	Parent=comp163081_c0_seq1.mrna1;Target=comp163081_c0_seq1 7134 7199 .
Chr1	stalkie_big_nohaplotig	mRNA	89630488	89644212	.	-	.	ID=FBgn0003366.1.mrna1;geneID=FBgn0003366.1.path1;Name=FBgn0003366.1;Dir=sensecoverage=99.7;identity=100.0;matches=6897;mismatches=3;indels=0;unknowns=0;locus=RLOC_00009445
Chr1	stalkie_big_nohaplotig	exon	89630488	89630848	100	-	.	Parent=FBgn0003366.1.mrna1;Target=FBgn0003366.1 6564 6924 +
Chr1	stalkie_big_nohaplotig	exon	89630906	89631333	100	-	.	Parent=FBgn0003366.1.mrna1;Target=FBgn0003366.1 6136 6563 +
Chr1	stalkie_big_nohaplotig	exon	89631402	89631593	99	-	.	Parent=FBgn0003366.1.mrna1;Target=FBgn0003366.1 5944 6135 +
Chr1	stalkie_big_nohaplotig	exon	89636061	89636359	100	-	.	Parent=FBgn0003366.1.mrna1;Target=FBgn0003366.1 5645 5943 +
Chr1	stalkie_big_nohaplotig	exon	89636421	89640864	100	-	.	Parent=FBgn0003366.1.mrna1;Target=FBgn0003366.1 1201 5644 +
Chr1	stalkie_big_nohaplotig	exon	89642630	89642750	100	-	.	Parent=FBgn0003366.1.mrna1;Target=FBgn0003366.1 1080 1200 +
Chr1	stalkie_big_nohaplotig	exon	89642898	89643226	100	-	.	Parent=FBgn0003366.1.mrna1;Target=FBgn0003366.1 751 1079 +
Chr1	stalkie_big_nohaplotig	exon	89643301	89643540	99	-	.	Parent=FBgn0003366.1.mrna1;Target=FBgn0003366.1 511 750 +
Chr1	stalkie_big_nohaplotig	exon	89643640	89644059	99	-	.	Parent=FBgn0003366.1.mrna1;Target=FBgn0003366.1 91 510 +
Chr1	stalkie_big_nohaplotig	exon	89644147	89644212	100	-	.	Parent=FBgn0003366.1.mrna1;Target=FBgn0003366.1 25 90 +
Chr1	stalkie_big_nohaplotig	CDS	89630488	89630848	.	-	1	Parent=FBgn0003366.1.mrna1;Target=FBgn0003366.1 6564 6924 +
Chr1	stalkie_big_nohaplotig	CDS	89630906	89631333	.	-	0	Parent=FBgn0003366.1.mrna1;Target=FBgn0003366.1 6136 6563 +
Chr1	stalkie_big_nohaplotig	CDS	89631402	89631593	.	-	0	Parent=FBgn0003366.1.mrna1;Target=FBgn0003366.1 5944 6135 +
Chr1	stalkie_big_nohaplotig	CDS	89636061	89636359	.	-	2	Parent=FBgn0003366.1.mrna1;Target=FBgn0003366.1 5645 5943 +
Chr1	stalkie_big_nohaplotig	CDS	89636421	89640864	.	-	0	Parent=FBgn0003366.1.mrna1;Target=FBgn0003366.1 1201 5644 +
Chr1	stalkie_big_nohaplotig	CDS	89642630	89642750	.	-	1	Parent=FBgn0003366.1.mrna1;Target=FBgn0003366.1 1080 1200 +
Chr1	stalkie_big_nohaplotig	CDS	89642898	89643226	.	-	0	Parent=FBgn0003366.1.mrna1;Target=FBgn0003366.1 751 1079 +
Chr1	stalkie_big_nohaplotig	CDS	89643301	89643540	.	-	0	Parent=FBgn0003366.1.mrna1;Target=FBgn0003366.1 511 750 +
Chr1	stalkie_big_nohaplotig	CDS	89643640	89644059	.	-	0	Parent=FBgn0003366.1.mrna1;Target=FBgn0003366.1 91 510 +
Chr1	stalkie_big_nohaplotig	CDS	89644147	89644212	.	-	0	Parent=FBgn0003366.1.mrna1;Target=FBgn0003366.1 25 90 +
Chr1	gffcl	locus	89632354	89633400	.	+	.	ID=RLOC_00009446;geneIDs=comp158901_c4_seq1.path1;transcripts=comp158901_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89632354	89633400	.	+	.	ID=comp158901_c4_seq1.mrna1;geneID=comp158901_c4_seq1.path1;Name=comp158901_c4_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1041;mismatches=2;indels=5;unknowns=0;Target=comp158901_c4_seq1 1044 1 .;CDS_Target=comp158901_c4_seq1 718 437 .;locus=RLOC_00009446
Chr1	stalkie_big_nohaplotig	exon	89632354	89633400	99	+	.	Parent=comp158901_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	89632790	89633075	.	+	0	Parent=comp158901_c4_seq1.mrna1
Chr1	gffcl	locus	89667573	89668733	.	+	.	ID=RLOC_00009447;geneIDs=comp150741_c0_seq1.path1;transcripts=comp150741_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89667573	89668733	.	+	.	ID=comp150741_c0_seq1.mrna1;geneID=comp150741_c0_seq1.path1;Name=comp150741_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.7;matches=1158;mismatches=3;indels=1;unknowns=0;Target=comp150741_c0_seq1 1162 1 .;CDS_Target=comp150741_c0_seq1 1103 810 .;locus=RLOC_00009447
Chr1	stalkie_big_nohaplotig	exon	89667573	89668733	99	+	.	Parent=comp150741_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	89668381	89668674	.	+	0	Parent=comp150741_c0_seq1.mrna1
Chr1	gffcl	locus	89767206	89770131	.	+	.	ID=RLOC_00009448;geneIDs=FBgn0030262.1.path1,comp118670_c0_seq1.path1,comp151606_c0_seq1.path1;transcripts=comp151606_c0_seq1.mrna1,FBgn0030262.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89768258	89770131	.	+	.	ID=comp151606_c0_seq1.mrna1;geneID=comp151606_c0_seq1.path1;Name=comp151606_c0_seq1;Dir=antisensecoverage=99.9;identity=99.7;matches=1798;mismatches=5;indels=0;unknowns=0;locus=RLOC_00009448
Chr1	stalkie_big_nohaplotig	exon	89768258	89768693	100	+	.	Parent=comp151606_c0_seq1.mrna1;Target=comp151606_c0_seq1 1369 1804 -
Chr1	stalkie_big_nohaplotig	exon	89768765	89770131	99	+	.	Parent=comp151606_c0_seq1.mrna1;Target=comp151606_c0_seq1 2 1368 -
Chr1	stalkie_big_nohaplotig	CDS	89768582	89768693	.	+	0	Parent=comp151606_c0_seq1.mrna1;Target=comp151606_c0_seq1 1369 1480 .
Chr1	stalkie_big_nohaplotig	CDS	89768765	89768898	.	+	2	Parent=comp151606_c0_seq1.mrna1;Target=comp151606_c0_seq1 1235 1368 .
Chr1	stalkie_big_nohaplotig	mRNA	89768552	89769795	.	+	.	ID=FBgn0030262.1.mrna1;geneID=FBgn0030262.1.path1;Name=FBgn0030262.1;Dir=sensecoverage=100.0;identity=99.8;matches=521;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009448
Chr1	stalkie_big_nohaplotig	exon	89768552	89768693	100	+	.	Parent=FBgn0030262.1.mrna1;Target=FBgn0030262.1 1 142 +
Chr1	stalkie_big_nohaplotig	exon	89768765	89768894	99	+	.	Parent=FBgn0030262.1.mrna1;Target=FBgn0030262.1 143 272 +
Chr1	stalkie_big_nohaplotig	exon	89769546	89769795	100	+	.	Parent=FBgn0030262.1.mrna1;Target=FBgn0030262.1 273 522 +
Chr1	stalkie_big_nohaplotig	CDS	89768552	89768693	.	+	0	Parent=FBgn0030262.1.mrna1;Target=FBgn0030262.1 1 142 +
Chr1	stalkie_big_nohaplotig	CDS	89768765	89768894	.	+	2	Parent=FBgn0030262.1.mrna1;Target=FBgn0030262.1 143 272 +
Chr1	stalkie_big_nohaplotig	CDS	89769546	89769795	.	+	1	Parent=FBgn0030262.1.mrna1;Target=FBgn0030262.1 273 522 +
Chr1	gffcl	locus	89775192	89790462	.	+	.	ID=RLOC_00009449;geneIDs=ORF1647.path1,comp162247_c2_seq1.path1;transcripts=comp162247_c2_seq1.mrna1,ORF1647.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89775192	89778973	.	+	.	ID=comp162247_c2_seq1.mrna1;geneID=comp162247_c2_seq1.path1;Name=comp162247_c2_seq1;Dir=indeterminatecoverage=95.3;identity=98.8;matches=3405;mismatches=27;indels=15;unknowns=0;Target=comp162247_c2_seq1 2379 1996 .;locus=RLOC_00009449
Chr1	stalkie_big_nohaplotig	exon	89775192	89777164	99	+	.	Parent=comp162247_c2_seq1.mrna1;Target=comp162247_c2_seq1 1984 1 .
Chr1	stalkie_big_nohaplotig	exon	89777514	89778717	98	+	.	Parent=comp162247_c2_seq1.mrna1;Target=comp162247_c2_seq1 3192 1985 .
Chr1	stalkie_big_nohaplotig	exon	89778719	89778973	99	+	.	Parent=comp162247_c2_seq1.mrna1;Target=comp162247_c2_seq1 3866 3612 .
Chr1	stalkie_big_nohaplotig	CDS	89777525	89777904	.	+	0	Parent=comp162247_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89777894	89790462	.	+	.	ID=ORF1647.mrna1;geneID=ORF1647.path1;Name=ORF1647;Dir=indeterminatecoverage=81.0;identity=98.2;matches=824;mismatches=13;indels=2;unknowns=0;Target=ORF1647 41 33 .;locus=RLOC_00009449
Chr1	stalkie_big_nohaplotig	exon	89777894	89778717	98	+	.	Parent=ORF1647.mrna1;Target=ORF1647 854 33 .
Chr1	stalkie_big_nohaplotig	exon	89786674	89786680	100	+	.	Parent=ORF1647.mrna1;Target=ORF1647 865 859 .
Chr1	stalkie_big_nohaplotig	exon	89790455	89790462	100	+	.	Parent=ORF1647.mrna1;Target=ORF1647 873 866 .
Chr1	stalkie_big_nohaplotig	CDS	89777894	89777904	.	+	0	Parent=ORF1647.mrna1
Chr1	gffcl	locus	89904417	89905097	.	+	.	ID=RLOC_00009451;geneIDs=comp160064_c0_seq1.path1;transcripts=comp160064_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	89904417	89905097	.	+	.	ID=comp160064_c0_seq1.mrna1;geneID=comp160064_c0_seq1.path1;Name=comp160064_c0_seq1;Dir=indeterminatecoverage=96.6;identity=96.3;matches=657;mismatches=24;indels=1;unknowns=0;Target=comp160064_c0_seq1 706 25 .;CDS_Target=comp160064_c0_seq1 391 341 .;locus=RLOC_00009451
Chr1	stalkie_big_nohaplotig	exon	89904417	89905097	96	+	.	Parent=comp160064_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	89904733	89904783	.	+	0	Parent=comp160064_c0_seq1.mrna1
Chr1	gffcl	locus	90016225	90016474	.	+	.	ID=RLOC_00009452;geneIDs=comp140565_c0_seq1.path1;transcripts=comp140565_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90016225	90016474	.	+	.	ID=comp140565_c0_seq1.mrna1;geneID=comp140565_c0_seq1.path1;Name=comp140565_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=246;mismatches=4;indels=0;unknowns=0;Target=comp140565_c0_seq1 250 1 .;CDS_Target=comp140565_c0_seq1 249 1 .;locus=RLOC_00009452
Chr1	stalkie_big_nohaplotig	exon	90016225	90016474	98	+	.	Parent=comp140565_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	90016225	90016473	.	+	0	Parent=comp140565_c0_seq1.mrna1
Chr1	gffcl	locus	90033841	90034600	.	-	.	ID=RLOC_00009453;geneIDs=comp106278_c0_seq1.path1;transcripts=comp106278_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90033841	90034600	.	-	.	ID=comp106278_c0_seq1.mrna1;geneID=comp106278_c0_seq1.path1;Name=comp106278_c0_seq1;Dir=indeterminatecoverage=99.0;identity=100.0;matches=760;mismatches=0;indels=0;unknowns=0;Target=comp106278_c0_seq1 760 1 .;CDS_Target=comp106278_c0_seq1 552 475 .;locus=RLOC_00009453
Chr1	stalkie_big_nohaplotig	exon	90033841	90034600	100	-	.	Parent=comp106278_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	90034049	90034126	.	-	0	Parent=comp106278_c0_seq1.mrna1
Chr1	gffcl	locus	90036106	90037804	.	-	.	ID=RLOC_00009454;geneIDs=FBgn0038301.2.path1;transcripts=FBgn0038301.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90036106	90037804	.	-	.	ID=FBgn0038301.2.mrna1;geneID=FBgn0038301.2.path1;Name=FBgn0038301.2;Dir=sensecoverage=100.0;identity=99.9;matches=1481;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009454
Chr1	stalkie_big_nohaplotig	exon	90036106	90036370	99	-	.	Parent=FBgn0038301.2.mrna1;Target=FBgn0038301.2 1218 1482 +
Chr1	stalkie_big_nohaplotig	exon	90036424	90036760	100	-	.	Parent=FBgn0038301.2.mrna1;Target=FBgn0038301.2 881 1217 +
Chr1	stalkie_big_nohaplotig	exon	90036817	90037160	100	-	.	Parent=FBgn0038301.2.mrna1;Target=FBgn0038301.2 537 880 +
Chr1	stalkie_big_nohaplotig	exon	90037215	90037289	100	-	.	Parent=FBgn0038301.2.mrna1;Target=FBgn0038301.2 462 536 +
Chr1	stalkie_big_nohaplotig	exon	90037344	90037804	100	-	.	Parent=FBgn0038301.2.mrna1;Target=FBgn0038301.2 1 461 +
Chr1	stalkie_big_nohaplotig	CDS	90036106	90036370	.	-	1	Parent=FBgn0038301.2.mrna1;Target=FBgn0038301.2 1218 1482 +
Chr1	stalkie_big_nohaplotig	CDS	90036424	90036760	.	-	2	Parent=FBgn0038301.2.mrna1;Target=FBgn0038301.2 881 1217 +
Chr1	stalkie_big_nohaplotig	CDS	90036817	90037160	.	-	1	Parent=FBgn0038301.2.mrna1;Target=FBgn0038301.2 537 880 +
Chr1	stalkie_big_nohaplotig	CDS	90037215	90037289	.	-	1	Parent=FBgn0038301.2.mrna1;Target=FBgn0038301.2 462 536 +
Chr1	stalkie_big_nohaplotig	CDS	90037344	90037804	.	-	0	Parent=FBgn0038301.2.mrna1;Target=FBgn0038301.2 1 461 +
Chr1	gffcl	locus	90038413	90040335	.	-	.	ID=RLOC_00009455;geneIDs=comp162554_c0_seq1.path1;transcripts=comp162554_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90038413	90040335	.	-	.	ID=comp162554_c0_seq1.mrna1;geneID=comp162554_c0_seq1.path1;Name=comp162554_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1921;mismatches=2;indels=1;unknowns=0;Target=comp162554_c0_seq1 1924 1 .;CDS_Target=comp162554_c0_seq1 1216 974 .;locus=RLOC_00009455
Chr1	stalkie_big_nohaplotig	exon	90038413	90040335	99	-	.	Parent=comp162554_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	90039121	90039363	.	-	0	Parent=comp162554_c0_seq1.mrna1
Chr1	gffcl	locus	90049981	90051231	.	+	.	ID=RLOC_00009456;geneIDs=Dp_FBgn0243606.path1;transcripts=Dp_FBgn0243606.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90049981	90051231	.	+	.	ID=Dp_FBgn0243606.mrna1;geneID=Dp_FBgn0243606.path1;Name=Dp_FBgn0243606;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1232;mismatches=14;indels=0;unknowns=5;Target=Dp_FBgn0243606 1251 1 .;locus=RLOC_00009456
Chr1	stalkie_big_nohaplotig	exon	90049981	90051231	98	+	.	Parent=Dp_FBgn0243606.mrna1
Chr1	stalkie_big_nohaplotig	CDS	90049981	90051231	.	+	0	Parent=Dp_FBgn0243606.mrna1
Chr1	gffcl	locus	90060925	91642448	.	.	.	ID=RLOC_00009457;geneIDs=CPIJ003423.path3,FBgn0010380.1.path1,FBgn0031061.1.path1,Dp_FBgn0249056.3.path1,Dp_FBgn0249247.8.path5,comp117019_c0_seq1.path1,comp137527_c0_seq1.path1,comp155983_c0_seq1.path3,comp157832_c0_seq1.path1,comp162459_c1_seq1.path1,comp163230_c1_seq1.path1,comp163982_c2_seq1.path3;transcripts=comp163230_c1_seq1.mrna1,comp157832_c0_seq1.mrna1,comp163982_c2_seq1.mrna3,comp162459_c1_seq1.mrna1,FBgn0031061.1.mrna1,comp155983_c0_seq1.mrna3,FBgn0010380.1.mrna1,comp137527_c0_seq1.mrna1,comp117019_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90060925	91642448	.	+	.	ID=comp163230_c1_seq1.mrna1;geneID=comp163230_c1_seq1.path1;Name=comp163230_c1_seq1;Dir=indeterminatecoverage=83.5;identity=81.1;matches=2394;mismatches=178;indels=380;unknowns=0;locus=RLOC_00009457
Chr1	stalkie_big_nohaplotig	exon	90060925	90061640	88	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 1387 675 .
Chr1	stalkie_big_nohaplotig	exon	90061691	90061784	93	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 1595 1502 .
Chr1	stalkie_big_nohaplotig	exon	90117841	90117851	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 1627 1617 .
Chr1	stalkie_big_nohaplotig	exon	90124373	90124381	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 1641 1633 .
Chr1	stalkie_big_nohaplotig	exon	90137779	90137788	34	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 1670 1642 .
Chr1	stalkie_big_nohaplotig	exon	90144124	90144134	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 1681 1671 .
Chr1	stalkie_big_nohaplotig	exon	90146182	90146224	46	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 1759 1704 .
Chr1	stalkie_big_nohaplotig	exon	90198416	90198420	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2037 2033 .
Chr1	stalkie_big_nohaplotig	exon	90198578	90198587	80	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2047 2038 .
Chr1	stalkie_big_nohaplotig	exon	90198655	90198727	27	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2073 2048 .
Chr1	stalkie_big_nohaplotig	exon	90198886	90198890	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2078 2074 .
Chr1	stalkie_big_nohaplotig	exon	90199012	90199028	82	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2095 2079 .
Chr1	stalkie_big_nohaplotig	exon	90199194	90199381	25	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2149 2096 .
Chr1	stalkie_big_nohaplotig	exon	90228427	90228428	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2298 2297 .
Chr1	stalkie_big_nohaplotig	exon	90234777	90234788	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2310 2299 .
Chr1	stalkie_big_nohaplotig	exon	90235100	90235123	75	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2339 2322 .
Chr1	stalkie_big_nohaplotig	exon	90329021	90329030	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2350 2341 .
Chr1	stalkie_big_nohaplotig	exon	90329043	90329056	35	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2386 2382 .
Chr1	stalkie_big_nohaplotig	exon	90329468	90329476	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2395 2387 .
Chr1	stalkie_big_nohaplotig	exon	90335824	90335831	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2411 2404 .
Chr1	stalkie_big_nohaplotig	exon	90335858	90335865	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2454 2447 .
Chr1	stalkie_big_nohaplotig	exon	90335873	90335880	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2474 2467 .
Chr1	stalkie_big_nohaplotig	exon	90336492	90336493	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2476 2475 .
Chr1	stalkie_big_nohaplotig	exon	90338021	90338028	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2484 2477 .
Chr1	stalkie_big_nohaplotig	exon	90338037	90338046	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2512 2503 .
Chr1	stalkie_big_nohaplotig	exon	90342160	90342161	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2614 2613 .
Chr1	stalkie_big_nohaplotig	exon	90342837	90342843	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2621 2615 .
Chr1	stalkie_big_nohaplotig	exon	90343561	90343568	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2629 2622 .
Chr1	stalkie_big_nohaplotig	exon	90344659	90344665	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2636 2630 .
Chr1	stalkie_big_nohaplotig	exon	90352155	90352163	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2645 2637 .
Chr1	stalkie_big_nohaplotig	exon	90357556	90357557	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2649 2648 .
Chr1	stalkie_big_nohaplotig	exon	90361761	90361772	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2661 2650 .
Chr1	stalkie_big_nohaplotig	exon	90368513	90368519	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2674 2668 .
Chr1	stalkie_big_nohaplotig	exon	90374250	90374259	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2684 2675 .
Chr1	stalkie_big_nohaplotig	exon	90374639	90374670	44	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2814 2770 .
Chr1	stalkie_big_nohaplotig	exon	90395723	90395730	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2822 2815 .
Chr1	stalkie_big_nohaplotig	exon	90396161	90396165	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2827 2823 .
Chr1	stalkie_big_nohaplotig	exon	90396568	90396576	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2836 2828 .
Chr1	stalkie_big_nohaplotig	exon	90401283	90401284	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2840 2839 .
Chr1	stalkie_big_nohaplotig	exon	90403710	90403717	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2848 2841 .
Chr1	stalkie_big_nohaplotig	exon	90403761	90403768	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2903 2896 .
Chr1	stalkie_big_nohaplotig	exon	90410287	90410294	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2918 2911 .
Chr1	stalkie_big_nohaplotig	exon	90411049	90411060	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2934 2923 .
Chr1	stalkie_big_nohaplotig	exon	90411069	90411070	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2967 2966 .
Chr1	stalkie_big_nohaplotig	exon	90416778	90416782	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2972 2968 .
Chr1	stalkie_big_nohaplotig	exon	90429423	90429425	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2975 2973 .
Chr1	stalkie_big_nohaplotig	exon	90433205	90433211	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2982 2976 .
Chr1	stalkie_big_nohaplotig	exon	90445898	90445905	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 2990 2983 .
Chr1	stalkie_big_nohaplotig	exon	90445934	90445942	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3045 3037 .
Chr1	stalkie_big_nohaplotig	exon	90446502	90446505	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3049 3046 .
Chr1	stalkie_big_nohaplotig	exon	90450098	90450107	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3059 3050 .
Chr1	stalkie_big_nohaplotig	exon	90450130	90450133	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3116 3113 .
Chr1	stalkie_big_nohaplotig	exon	90451449	90451451	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3119 3117 .
Chr1	stalkie_big_nohaplotig	exon	90457534	90457543	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3129 3120 .
Chr1	stalkie_big_nohaplotig	exon	90466146	90466154	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3208 3200 .
Chr1	stalkie_big_nohaplotig	exon	90473760	90473769	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3222 3213 .
Chr1	stalkie_big_nohaplotig	exon	90473802	90473804	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3276 3274 .
Chr1	stalkie_big_nohaplotig	exon	90488242	90488247	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3282 3277 .
Chr1	stalkie_big_nohaplotig	exon	90489573	90489580	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3290 3283 .
Chr1	stalkie_big_nohaplotig	exon	90489617	90489619	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3343 3341 .
Chr1	stalkie_big_nohaplotig	exon	90490302	90490303	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3345 3344 .
Chr1	stalkie_big_nohaplotig	exon	90497744	90497753	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3355 3346 .
Chr1	stalkie_big_nohaplotig	exon	90517302	90517309	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3521 3514 .
Chr1	stalkie_big_nohaplotig	exon	90523070	90523072	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3524 3522 .
Chr1	stalkie_big_nohaplotig	exon	90523562	90523567	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3530 3525 .
Chr1	stalkie_big_nohaplotig	exon	90525113	90525120	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3538 3531 .
Chr1	stalkie_big_nohaplotig	exon	90529180	90529182	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3541 3539 .
Chr1	stalkie_big_nohaplotig	exon	90530648	90530659	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3553 3542 .
Chr1	stalkie_big_nohaplotig	exon	90553273	90553280	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3573 3566 .
Chr1	stalkie_big_nohaplotig	exon	90554274	90554281	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3587 3580 .
Chr1	stalkie_big_nohaplotig	exon	90558924	90558927	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3591 3588 .
Chr1	stalkie_big_nohaplotig	exon	90572192	90572201	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3601 3592 .
Chr1	stalkie_big_nohaplotig	exon	90574006	90574015	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3617 3608 .
Chr1	stalkie_big_nohaplotig	exon	90577568	90577571	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3626 3623 .
Chr1	stalkie_big_nohaplotig	exon	90579414	90579422	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3635 3627 .
Chr1	stalkie_big_nohaplotig	exon	90579436	90579440	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3666 3662 .
Chr1	stalkie_big_nohaplotig	exon	90582599	90582613	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3681 3667 .
Chr1	stalkie_big_nohaplotig	exon	90587139	90587147	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3738 3730 .
Chr1	stalkie_big_nohaplotig	exon	90592096	90592103	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3820 3813 .
Chr1	stalkie_big_nohaplotig	exon	90596372	90596382	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3891 3881 .
Chr1	stalkie_big_nohaplotig	exon	90607066	90607070	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3976 3972 .
Chr1	stalkie_big_nohaplotig	exon	90607646	90607648	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3979 3977 .
Chr1	stalkie_big_nohaplotig	exon	90608702	90608705	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3983 3980 .
Chr1	stalkie_big_nohaplotig	exon	90613104	90613113	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 3993 3984 .
Chr1	stalkie_big_nohaplotig	exon	90631775	90631780	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4066 4061 .
Chr1	stalkie_big_nohaplotig	exon	90633658	90633666	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4075 4067 .
Chr1	stalkie_big_nohaplotig	exon	90638338	90638348	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4086 4076 .
Chr1	stalkie_big_nohaplotig	exon	90645813	90645817	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4136 4132 .
Chr1	stalkie_big_nohaplotig	exon	90661168	90661177	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4146 4137 .
Chr1	stalkie_big_nohaplotig	exon	90666493	90666494	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4153 4152 .
Chr1	stalkie_big_nohaplotig	exon	90673854	90673855	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4155 4154 .
Chr1	stalkie_big_nohaplotig	exon	90684591	90684592	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4157 4156 .
Chr1	stalkie_big_nohaplotig	exon	90699812	90699821	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4167 4158 .
Chr1	stalkie_big_nohaplotig	exon	90709105	90709111	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4174 4168 .
Chr1	stalkie_big_nohaplotig	exon	90711914	90711924	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4185 4175 .
Chr1	stalkie_big_nohaplotig	exon	90744858	90744872	59	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4254 4234 .
Chr1	stalkie_big_nohaplotig	exon	90744906	90744913	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4290 4283 .
Chr1	stalkie_big_nohaplotig	exon	90765161	90765167	77	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4349 4341 .
Chr1	stalkie_big_nohaplotig	exon	90772730	90772737	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4357 4350 .
Chr1	stalkie_big_nohaplotig	exon	90772739	90772747	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4383 4375 .
Chr1	stalkie_big_nohaplotig	exon	90781580	90781590	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4402 4392 .
Chr1	stalkie_big_nohaplotig	exon	90791964	90791975	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4417 4406 .
Chr1	stalkie_big_nohaplotig	exon	90853754	90853763	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4530 4521 .
Chr1	stalkie_big_nohaplotig	exon	90890586	90890594	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4560 4552 .
Chr1	stalkie_big_nohaplotig	exon	90890616	90890624	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4585 4577 .
Chr1	stalkie_big_nohaplotig	exon	90895566	90895568	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4653 4651 .
Chr1	stalkie_big_nohaplotig	exon	90898819	90898831	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4666 4654 .
Chr1	stalkie_big_nohaplotig	exon	90903763	90903767	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4674 4670 .
Chr1	stalkie_big_nohaplotig	exon	90905044	90905049	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4680 4675 .
Chr1	stalkie_big_nohaplotig	exon	90909791	90909792	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4682 4681 .
Chr1	stalkie_big_nohaplotig	exon	90914104	90914115	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4694 4683 .
Chr1	stalkie_big_nohaplotig	exon	90914151	90914153	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4755 4753 .
Chr1	stalkie_big_nohaplotig	exon	90914284	90914289	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4761 4756 .
Chr1	stalkie_big_nohaplotig	exon	90920072	90920081	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4771 4762 .
Chr1	stalkie_big_nohaplotig	exon	90927429	90927439	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4782 4772 .
Chr1	stalkie_big_nohaplotig	exon	90931402	90931405	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4828 4825 .
Chr1	stalkie_big_nohaplotig	exon	90941220	90941227	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4836 4829 .
Chr1	stalkie_big_nohaplotig	exon	90941249	90941255	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4857 4851 .
Chr1	stalkie_big_nohaplotig	exon	90943431	90943434	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4861 4858 .
Chr1	stalkie_big_nohaplotig	exon	90950099	90950103	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4866 4862 .
Chr1	stalkie_big_nohaplotig	exon	90950931	90950941	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4877 4867 .
Chr1	stalkie_big_nohaplotig	exon	90960980	90960988	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4890 4882 .
Chr1	stalkie_big_nohaplotig	exon	90961016	90961022	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4933 4927 .
Chr1	stalkie_big_nohaplotig	exon	90962555	90962557	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4936 4934 .
Chr1	stalkie_big_nohaplotig	exon	90968173	90968182	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 4946 4937 .
Chr1	stalkie_big_nohaplotig	exon	90973376	90973431	54	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 5053 4998 .
Chr1	stalkie_big_nohaplotig	exon	91003438	91003456	57	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 5092 5080 .
Chr1	stalkie_big_nohaplotig	exon	91003514	91003522	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 5157 5149 .
Chr1	stalkie_big_nohaplotig	exon	91104641	91104643	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 5240 5238 .
Chr1	stalkie_big_nohaplotig	exon	91108116	91108126	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 5251 5241 .
Chr1	stalkie_big_nohaplotig	exon	91256686	91256725	50	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 5631 5582 .
Chr1	stalkie_big_nohaplotig	exon	91260632	91260642	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 5709 5699 .
Chr1	stalkie_big_nohaplotig	exon	91267413	91267418	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 5795 5790 .
Chr1	stalkie_big_nohaplotig	exon	91268612	91268619	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 5803 5796 .
Chr1	stalkie_big_nohaplotig	exon	91274956	91274965	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 5813 5804 .
Chr1	stalkie_big_nohaplotig	exon	91276199	91276203	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 5892 5888 .
Chr1	stalkie_big_nohaplotig	exon	91277773	91277781	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 5901 5893 .
Chr1	stalkie_big_nohaplotig	exon	91277837	91277847	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 5962 5952 .
Chr1	stalkie_big_nohaplotig	exon	91280227	91280237	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 5979 5969 .
Chr1	stalkie_big_nohaplotig	exon	91319653	91319655	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6037 6035 .
Chr1	stalkie_big_nohaplotig	exon	91321837	91321847	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6048 6038 .
Chr1	stalkie_big_nohaplotig	exon	91328675	91328684	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6172 6163 .
Chr1	stalkie_big_nohaplotig	exon	91328724	91328731	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6217 6210 .
Chr1	stalkie_big_nohaplotig	exon	91346390	91346395	35	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6254 6241 .
Chr1	stalkie_big_nohaplotig	exon	91346716	91346721	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6260 6255 .
Chr1	stalkie_big_nohaplotig	exon	91347358	91347435	19	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6275 6261 .
Chr1	stalkie_big_nohaplotig	exon	91348049	91348054	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6281 6276 .
Chr1	stalkie_big_nohaplotig	exon	91354058	91354066	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6290 6282 .
Chr1	stalkie_big_nohaplotig	exon	91354073	91354080	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6310 6303 .
Chr1	stalkie_big_nohaplotig	exon	91354498	91354506	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6323 6315 .
Chr1	stalkie_big_nohaplotig	exon	91359492	91359499	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6335 6328 .
Chr1	stalkie_big_nohaplotig	exon	91359531	91359534	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6387 6384 .
Chr1	stalkie_big_nohaplotig	exon	91363921	91363925	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6392 6388 .
Chr1	stalkie_big_nohaplotig	exon	91364425	91364431	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6399 6393 .
Chr1	stalkie_big_nohaplotig	exon	91367381	91367391	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6410 6400 .
Chr1	stalkie_big_nohaplotig	exon	91377409	91377414	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6416 6411 .
Chr1	stalkie_big_nohaplotig	exon	91384417	91384425	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6425 6417 .
Chr1	stalkie_big_nohaplotig	exon	91384456	91384457	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6458 6457 .
Chr1	stalkie_big_nohaplotig	exon	91387755	91387765	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6469 6459 .
Chr1	stalkie_big_nohaplotig	exon	91395111	91395114	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6475 6472 .
Chr1	stalkie_big_nohaplotig	exon	91399190	91399194	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6480 6476 .
Chr1	stalkie_big_nohaplotig	exon	91403013	91403016	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6484 6481 .
Chr1	stalkie_big_nohaplotig	exon	91405035	91405039	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6489 6485 .
Chr1	stalkie_big_nohaplotig	exon	91406364	91406371	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6497 6490 .
Chr1	stalkie_big_nohaplotig	exon	91406396	91406401	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6526 6521 .
Chr1	stalkie_big_nohaplotig	exon	91420045	91420048	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6530 6527 .
Chr1	stalkie_big_nohaplotig	exon	91435042	91435049	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6538 6531 .
Chr1	stalkie_big_nohaplotig	exon	91439359	91439368	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6548 6539 .
Chr1	stalkie_big_nohaplotig	exon	91441387	91441390	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6552 6549 .
Chr1	stalkie_big_nohaplotig	exon	91441746	91441749	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6556 6553 .
Chr1	stalkie_big_nohaplotig	exon	91441859	91441867	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6565 6557 .
Chr1	stalkie_big_nohaplotig	exon	91445733	91445736	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6571 6568 .
Chr1	stalkie_big_nohaplotig	exon	91448985	91448989	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6576 6572 .
Chr1	stalkie_big_nohaplotig	exon	91456818	91456821	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6580 6577 .
Chr1	stalkie_big_nohaplotig	exon	91457128	91457130	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6583 6581 .
Chr1	stalkie_big_nohaplotig	exon	91459451	91459460	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6593 6584 .
Chr1	stalkie_big_nohaplotig	exon	91463296	91463300	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6602 6598 .
Chr1	stalkie_big_nohaplotig	exon	91467548	91467549	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6604 6603 .
Chr1	stalkie_big_nohaplotig	exon	91470557	91470561	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6609 6605 .
Chr1	stalkie_big_nohaplotig	exon	91483880	91483888	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6618 6610 .
Chr1	stalkie_big_nohaplotig	exon	91483919	91483927	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6683 6675 .
Chr1	stalkie_big_nohaplotig	exon	91498193	91498197	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6694 6690 .
Chr1	stalkie_big_nohaplotig	exon	91500316	91500319	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6698 6695 .
Chr1	stalkie_big_nohaplotig	exon	91504026	91504032	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6705 6699 .
Chr1	stalkie_big_nohaplotig	exon	91504334	91504340	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6712 6706 .
Chr1	stalkie_big_nohaplotig	exon	91507931	91507934	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6716 6713 .
Chr1	stalkie_big_nohaplotig	exon	91515154	91515161	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6724 6717 .
Chr1	stalkie_big_nohaplotig	exon	91515176	91515177	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6752 6751 .
Chr1	stalkie_big_nohaplotig	exon	91522381	91522389	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6761 6753 .
Chr1	stalkie_big_nohaplotig	exon	91522428	91522444	70	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6828 6817 .
Chr1	stalkie_big_nohaplotig	exon	91532621	91532637	76	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6847 6832 .
Chr1	stalkie_big_nohaplotig	exon	91532643	91532654	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6874 6863 .
Chr1	stalkie_big_nohaplotig	exon	91553357	91553405	50	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6938 6875 .
Chr1	stalkie_big_nohaplotig	exon	91556682	91556688	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6945 6939 .
Chr1	stalkie_big_nohaplotig	exon	91560018	91560025	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6953 6946 .
Chr1	stalkie_big_nohaplotig	exon	91560032	91560033	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6971 6970 .
Chr1	stalkie_big_nohaplotig	exon	91567786	91567790	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6976 6972 .
Chr1	stalkie_big_nohaplotig	exon	91572473	91572474	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6978 6977 .
Chr1	stalkie_big_nohaplotig	exon	91579101	91579104	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6982 6979 .
Chr1	stalkie_big_nohaplotig	exon	91590305	91590314	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 6992 6983 .
Chr1	stalkie_big_nohaplotig	exon	91590345	91590348	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 7020 7017 .
Chr1	stalkie_big_nohaplotig	exon	91594329	91594330	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 7022 7021 .
Chr1	stalkie_big_nohaplotig	exon	91607039	91607050	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 7034 7023 .
Chr1	stalkie_big_nohaplotig	exon	91633820	91633829	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 7139 7130 .
Chr1	stalkie_big_nohaplotig	exon	91638456	91638462	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 7185 7179 .
Chr1	stalkie_big_nohaplotig	exon	91642443	91642448	100	+	.	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 7191 7186 .
Chr1	stalkie_big_nohaplotig	CDS	90061119	90061640	.	+	0	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 1387 866 .
Chr1	stalkie_big_nohaplotig	CDS	90061691	90061784	.	+	0	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 1595 1502 .
Chr1	stalkie_big_nohaplotig	CDS	90117841	90117851	.	+	2	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 1627 1617 .
Chr1	stalkie_big_nohaplotig	CDS	90124373	90124381	.	+	0	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 1641 1633 .
Chr1	stalkie_big_nohaplotig	CDS	90137779	90137788	.	+	0	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 1670 1642 .
Chr1	stalkie_big_nohaplotig	CDS	90144124	90144134	.	+	2	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 1681 1671 .
Chr1	stalkie_big_nohaplotig	CDS	90146182	90146187	.	+	0	Parent=comp163230_c1_seq1.mrna1;Target=comp163230_c1_seq1 1717 1704 .
Chr1	stalkie_big_nohaplotig	mRNA	90366200	90791748	.	+	.	ID=comp157832_c0_seq1.mrna1;geneID=comp157832_c0_seq1.path1;Name=comp157832_c0_seq1;Dir=indeterminatecoverage=90.6;identity=95.0;matches=2286;mismatches=67;indels=54;unknowns=0;locus=RLOC_00009457
Chr1	stalkie_big_nohaplotig	exon	90366200	90366314	92	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 229 116 .
Chr1	stalkie_big_nohaplotig	exon	90366404	90366859	84	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 759 297 .
Chr1	stalkie_big_nohaplotig	exon	90387602	90387609	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 767 760 .
Chr1	stalkie_big_nohaplotig	exon	90396028	90396035	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 776 769 .
Chr1	stalkie_big_nohaplotig	exon	90405094	90405098	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 781 777 .
Chr1	stalkie_big_nohaplotig	exon	90409466	90409468	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 784 782 .
Chr1	stalkie_big_nohaplotig	exon	90416426	90416429	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 788 785 .
Chr1	stalkie_big_nohaplotig	exon	90421000	90421005	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 794 789 .
Chr1	stalkie_big_nohaplotig	exon	90422078	90422081	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 798 795 .
Chr1	stalkie_big_nohaplotig	exon	90424283	90424287	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 803 799 .
Chr1	stalkie_big_nohaplotig	exon	90425440	90425447	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 811 804 .
Chr1	stalkie_big_nohaplotig	exon	90443097	90443104	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 820 813 .
Chr1	stalkie_big_nohaplotig	exon	90445993	90445994	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 822 821 .
Chr1	stalkie_big_nohaplotig	exon	90449093	90449105	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 835 823 .
Chr1	stalkie_big_nohaplotig	exon	90460688	90460721	67	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 868 843 .
Chr1	stalkie_big_nohaplotig	exon	90462076	90462085	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 878 869 .
Chr1	stalkie_big_nohaplotig	exon	90462087	90462093	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 932 926 .
Chr1	stalkie_big_nohaplotig	exon	90466941	90466948	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 940 933 .
Chr1	stalkie_big_nohaplotig	exon	90473139	90473149	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 951 941 .
Chr1	stalkie_big_nohaplotig	exon	90475383	90475384	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 955 954 .
Chr1	stalkie_big_nohaplotig	exon	90477524	90477527	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 959 956 .
Chr1	stalkie_big_nohaplotig	exon	90477652	90477657	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 965 960 .
Chr1	stalkie_big_nohaplotig	exon	90478776	90478783	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 973 966 .
Chr1	stalkie_big_nohaplotig	exon	90479421	90479432	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 992 981 .
Chr1	stalkie_big_nohaplotig	exon	90489245	90489246	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 998 997 .
Chr1	stalkie_big_nohaplotig	exon	90503417	90503430	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1012 999 .
Chr1	stalkie_big_nohaplotig	exon	90504669	90504675	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1019 1013 .
Chr1	stalkie_big_nohaplotig	exon	90507698	90507708	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1030 1020 .
Chr1	stalkie_big_nohaplotig	exon	90520815	90520822	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1041 1034 .
Chr1	stalkie_big_nohaplotig	exon	90525150	90525152	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1044 1042 .
Chr1	stalkie_big_nohaplotig	exon	90529822	90529826	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1049 1045 .
Chr1	stalkie_big_nohaplotig	exon	90530626	90530629	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1053 1050 .
Chr1	stalkie_big_nohaplotig	exon	90531175	90531178	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1057 1054 .
Chr1	stalkie_big_nohaplotig	exon	90534920	90534929	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1067 1058 .
Chr1	stalkie_big_nohaplotig	exon	90540999	90541010	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1079 1068 .
Chr1	stalkie_big_nohaplotig	exon	90541036	90541038	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1105 1103 .
Chr1	stalkie_big_nohaplotig	exon	90546604	90546609	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1111 1106 .
Chr1	stalkie_big_nohaplotig	exon	90557885	90557888	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1115 1112 .
Chr1	stalkie_big_nohaplotig	exon	90563298	90563305	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1123 1116 .
Chr1	stalkie_big_nohaplotig	exon	90576042	90576047	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1129 1124 .
Chr1	stalkie_big_nohaplotig	exon	90577011	90577016	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1135 1130 .
Chr1	stalkie_big_nohaplotig	exon	90582699	90582703	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1140 1136 .
Chr1	stalkie_big_nohaplotig	exon	90588039	90588044	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1146 1141 .
Chr1	stalkie_big_nohaplotig	exon	90589542	90589551	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1156 1147 .
Chr1	stalkie_big_nohaplotig	exon	90591081	90591082	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1210 1209 .
Chr1	stalkie_big_nohaplotig	exon	90592272	90592288	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1227 1211 .
Chr1	stalkie_big_nohaplotig	exon	90598985	90598993	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1236 1228 .
Chr1	stalkie_big_nohaplotig	exon	90605487	90605493	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1247 1241 .
Chr1	stalkie_big_nohaplotig	exon	90611413	90611414	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1249 1248 .
Chr1	stalkie_big_nohaplotig	exon	90614605	90614608	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1253 1250 .
Chr1	stalkie_big_nohaplotig	exon	90628360	90628366	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1260 1254 .
Chr1	stalkie_big_nohaplotig	exon	90633400	90633404	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1265 1261 .
Chr1	stalkie_big_nohaplotig	exon	90634080	90634083	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1269 1266 .
Chr1	stalkie_big_nohaplotig	exon	90634578	90634584	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1276 1270 .
Chr1	stalkie_big_nohaplotig	exon	90640363	90640365	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1279 1277 .
Chr1	stalkie_big_nohaplotig	exon	90641164	90641166	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1282 1280 .
Chr1	stalkie_big_nohaplotig	exon	90642646	90642648	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1285 1283 .
Chr1	stalkie_big_nohaplotig	exon	90644292	90644293	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1287 1286 .
Chr1	stalkie_big_nohaplotig	exon	90647993	90648003	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1298 1288 .
Chr1	stalkie_big_nohaplotig	exon	90648383	90648384	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1300 1299 .
Chr1	stalkie_big_nohaplotig	exon	90653071	90653082	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1312 1301 .
Chr1	stalkie_big_nohaplotig	exon	90656142	90656149	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1327 1320 .
Chr1	stalkie_big_nohaplotig	exon	90657203	90657204	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1329 1328 .
Chr1	stalkie_big_nohaplotig	exon	90664752	90664761	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1339 1330 .
Chr1	stalkie_big_nohaplotig	exon	90666667	90666669	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1345 1343 .
Chr1	stalkie_big_nohaplotig	exon	90674317	90674329	46	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1351 1346 .
Chr1	stalkie_big_nohaplotig	exon	90680281	90680284	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1355 1352 .
Chr1	stalkie_big_nohaplotig	exon	90687193	90687199	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1362 1356 .
Chr1	stalkie_big_nohaplotig	exon	90692329	90692331	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1365 1363 .
Chr1	stalkie_big_nohaplotig	exon	90699898	90699905	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1373 1366 .
Chr1	stalkie_big_nohaplotig	exon	90707522	90707527	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1386 1381 .
Chr1	stalkie_big_nohaplotig	exon	90710880	90710888	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1395 1387 .
Chr1	stalkie_big_nohaplotig	exon	90727054	90727056	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1398 1396 .
Chr1	stalkie_big_nohaplotig	exon	90728614	90728621	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1406 1399 .
Chr1	stalkie_big_nohaplotig	exon	90729113	90729116	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1410 1407 .
Chr1	stalkie_big_nohaplotig	exon	90729810	90729811	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1412 1411 .
Chr1	stalkie_big_nohaplotig	exon	90733411	90733419	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1421 1413 .
Chr1	stalkie_big_nohaplotig	exon	90733443	90733447	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1450 1446 .
Chr1	stalkie_big_nohaplotig	exon	90735055	90735057	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1453 1451 .
Chr1	stalkie_big_nohaplotig	exon	90735760	90735761	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1455 1454 .
Chr1	stalkie_big_nohaplotig	exon	90736035	90736038	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1459 1456 .
Chr1	stalkie_big_nohaplotig	exon	90736778	90736780	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1462 1460 .
Chr1	stalkie_big_nohaplotig	exon	90744096	90744104	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1471 1463 .
Chr1	stalkie_big_nohaplotig	exon	90745247	90745249	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1474 1472 .
Chr1	stalkie_big_nohaplotig	exon	90755471	90755478	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1482 1475 .
Chr1	stalkie_big_nohaplotig	exon	90762794	90762795	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1484 1483 .
Chr1	stalkie_big_nohaplotig	exon	90766484	90766532	62	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1530 1485 .
Chr1	stalkie_big_nohaplotig	exon	90780791	90780798	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1629 1622 .
Chr1	stalkie_big_nohaplotig	exon	90788392	90788401	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1645 1636 .
Chr1	stalkie_big_nohaplotig	exon	90790391	90790476	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1768 1683 .
Chr1	stalkie_big_nohaplotig	exon	90790526	90790662	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1905 1769 .
Chr1	stalkie_big_nohaplotig	exon	90790717	90790927	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 2116 1906 .
Chr1	stalkie_big_nohaplotig	exon	90790986	90791748	100	+	.	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 2879 2117 .
Chr1	stalkie_big_nohaplotig	CDS	90790449	90790476	.	+	0	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1768 1741 .
Chr1	stalkie_big_nohaplotig	CDS	90790526	90790632	.	+	2	Parent=comp157832_c0_seq1.mrna1;Target=comp157832_c0_seq1 1875 1769 .
Chr1	stalkie_big_nohaplotig	mRNA	90408231	90475814	.	+	.	ID=comp163982_c2_seq1.mrna3;geneID=comp163982_c2_seq1.path3;Name=comp163982_c2_seq1;Dir=indeterminatecoverage=89.8;identity=98.4;matches=3574;mismatches=46;indels=12;unknowns=0;locus=RLOC_00009457
Chr1	stalkie_big_nohaplotig	exon	90408231	90411649	99	+	.	Parent=comp163982_c2_seq1.mrna3;Target=comp163982_c2_seq1 3419 1 .
Chr1	stalkie_big_nohaplotig	exon	90412446	90412529	76	+	.	Parent=comp163982_c2_seq1.mrna3;Target=comp163982_c2_seq1 3504 3420 .
Chr1	stalkie_big_nohaplotig	exon	90413304	90413314	100	+	.	Parent=comp163982_c2_seq1.mrna3;Target=comp163982_c2_seq1 3608 3598 .
Chr1	stalkie_big_nohaplotig	exon	90422227	90422233	100	+	.	Parent=comp163982_c2_seq1.mrna3;Target=comp163982_c2_seq1 3616 3610 .
Chr1	stalkie_big_nohaplotig	exon	90430100	90430110	90	+	.	Parent=comp163982_c2_seq1.mrna3;Target=comp163982_c2_seq1 3626 3617 .
Chr1	stalkie_big_nohaplotig	exon	90433326	90433332	85	+	.	Parent=comp163982_c2_seq1.mrna3;Target=comp163982_c2_seq1 3633 3627 .
Chr1	stalkie_big_nohaplotig	exon	90433387	90433437	57	+	.	Parent=comp163982_c2_seq1.mrna3;Target=comp163982_c2_seq1 3694 3634 .
Chr1	stalkie_big_nohaplotig	exon	90438501	90438507	100	+	.	Parent=comp163982_c2_seq1.mrna3;Target=comp163982_c2_seq1 3701 3695 .
Chr1	stalkie_big_nohaplotig	exon	90454541	90454546	100	+	.	Parent=comp163982_c2_seq1.mrna3;Target=comp163982_c2_seq1 3707 3702 .
Chr1	stalkie_big_nohaplotig	exon	90457910	90457912	100	+	.	Parent=comp163982_c2_seq1.mrna3;Target=comp163982_c2_seq1 3710 3708 .
Chr1	stalkie_big_nohaplotig	exon	90458825	90458827	100	+	.	Parent=comp163982_c2_seq1.mrna3;Target=comp163982_c2_seq1 3713 3711 .
Chr1	stalkie_big_nohaplotig	exon	90475804	90475814	90	+	.	Parent=comp163982_c2_seq1.mrna3;Target=comp163982_c2_seq1 3724 3714 .
Chr1	stalkie_big_nohaplotig	CDS	90409141	90411649	.	+	0	Parent=comp163982_c2_seq1.mrna3;Target=comp163982_c2_seq1 3419 911 .
Chr1	stalkie_big_nohaplotig	CDS	90412446	90412468	.	+	2	Parent=comp163982_c2_seq1.mrna3;Target=comp163982_c2_seq1 3442 3420 .
Chr1	stalkie_big_nohaplotig	mRNA	90490115	90495737	.	+	.	ID=comp162459_c1_seq1.mrna1;geneID=comp162459_c1_seq1.path1;Name=comp162459_c1_seq1;Dir=indeterminatecoverage=99.3;identity=99.5;matches=5595;mismatches=27;indels=3;unknowns=0;Target=comp162459_c1_seq1 5661 38 .;CDS_Target=comp162459_c1_seq1 5407 4970 .;locus=RLOC_00009457
Chr1	stalkie_big_nohaplotig	exon	90490115	90495737	99	+	.	Parent=comp162459_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	90495046	90495483	.	+	0	Parent=comp162459_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90571288	90572857	.	+	.	ID=FBgn0031061.1.mrna1;geneID=FBgn0031061.1.path1;Name=FBgn0031061.1;Dir=sensecoverage=100.0;identity=100.0;matches=1305;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009457
Chr1	stalkie_big_nohaplotig	exon	90571288	90571366	100	+	.	Parent=FBgn0031061.1.mrna1;Target=FBgn0031061.1 1 79 +
Chr1	stalkie_big_nohaplotig	exon	90571422	90571849	100	+	.	Parent=FBgn0031061.1.mrna1;Target=FBgn0031061.1 80 507 +
Chr1	stalkie_big_nohaplotig	exon	90572008	90572391	100	+	.	Parent=FBgn0031061.1.mrna1;Target=FBgn0031061.1 508 891 +
Chr1	stalkie_big_nohaplotig	exon	90572444	90572857	100	+	.	Parent=FBgn0031061.1.mrna1;Target=FBgn0031061.1 892 1305 +
Chr1	stalkie_big_nohaplotig	CDS	90571288	90571366	.	+	0	Parent=FBgn0031061.1.mrna1;Target=FBgn0031061.1 1 79 +
Chr1	stalkie_big_nohaplotig	CDS	90571422	90571849	.	+	2	Parent=FBgn0031061.1.mrna1;Target=FBgn0031061.1 80 507 +
Chr1	stalkie_big_nohaplotig	CDS	90572008	90572391	.	+	0	Parent=FBgn0031061.1.mrna1;Target=FBgn0031061.1 508 891 +
Chr1	stalkie_big_nohaplotig	CDS	90572444	90572857	.	+	0	Parent=FBgn0031061.1.mrna1;Target=FBgn0031061.1 892 1305 +
Chr1	stalkie_big_nohaplotig	mRNA	90575635	90576362	.	-	.	ID=comp155983_c0_seq1.mrna3;geneID=comp155983_c0_seq1.path3;Name=comp155983_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=723;mismatches=5;indels=3;unknowns=0;Target=comp155983_c0_seq1 731 1 .;CDS_Target=comp155983_c0_seq1 105 1 .;locus=RLOC_00009457
Chr1	stalkie_big_nohaplotig	exon	90575635	90576362	98	-	.	Parent=comp155983_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	90576258	90576362	.	-	0	Parent=comp155983_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	90606595	90610002	.	+	.	ID=FBgn0010380.1.mrna1;geneID=FBgn0010380.1.path1;Name=FBgn0010380.1;Dir=sensecoverage=100.0;identity=100.0;matches=2865;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009457
Chr1	stalkie_big_nohaplotig	exon	90606595	90606687	100	+	.	Parent=FBgn0010380.1.mrna1;Target=FBgn0010380.1 1 93 +
Chr1	stalkie_big_nohaplotig	exon	90606918	90607052	100	+	.	Parent=FBgn0010380.1.mrna1;Target=FBgn0010380.1 94 228 +
Chr1	stalkie_big_nohaplotig	exon	90607162	90607332	100	+	.	Parent=FBgn0010380.1.mrna1;Target=FBgn0010380.1 229 399 +
Chr1	stalkie_big_nohaplotig	exon	90607385	90607570	100	+	.	Parent=FBgn0010380.1.mrna1;Target=FBgn0010380.1 400 585 +
Chr1	stalkie_big_nohaplotig	exon	90607618	90608304	100	+	.	Parent=FBgn0010380.1.mrna1;Target=FBgn0010380.1 586 1272 +
Chr1	stalkie_big_nohaplotig	exon	90608353	90609162	100	+	.	Parent=FBgn0010380.1.mrna1;Target=FBgn0010380.1 1273 2082 +
Chr1	stalkie_big_nohaplotig	exon	90609220	90610002	100	+	.	Parent=FBgn0010380.1.mrna1;Target=FBgn0010380.1 2083 2865 +
Chr1	stalkie_big_nohaplotig	CDS	90606595	90606687	.	+	0	Parent=FBgn0010380.1.mrna1;Target=FBgn0010380.1 1 93 +
Chr1	stalkie_big_nohaplotig	CDS	90606918	90607052	.	+	0	Parent=FBgn0010380.1.mrna1;Target=FBgn0010380.1 94 228 +
Chr1	stalkie_big_nohaplotig	CDS	90607162	90607332	.	+	0	Parent=FBgn0010380.1.mrna1;Target=FBgn0010380.1 229 399 +
Chr1	stalkie_big_nohaplotig	CDS	90607385	90607570	.	+	0	Parent=FBgn0010380.1.mrna1;Target=FBgn0010380.1 400 585 +
Chr1	stalkie_big_nohaplotig	CDS	90607618	90608304	.	+	0	Parent=FBgn0010380.1.mrna1;Target=FBgn0010380.1 586 1272 +
Chr1	stalkie_big_nohaplotig	CDS	90608353	90609162	.	+	0	Parent=FBgn0010380.1.mrna1;Target=FBgn0010380.1 1273 2082 +
Chr1	stalkie_big_nohaplotig	CDS	90609220	90610002	.	+	0	Parent=FBgn0010380.1.mrna1;Target=FBgn0010380.1 2083 2865 +
Chr1	stalkie_big_nohaplotig	mRNA	90762510	90763781	.	+	.	ID=comp137527_c0_seq1.mrna1;geneID=comp137527_c0_seq1.path1;Name=comp137527_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=1011;mismatches=0;indels=0;unknowns=0;Target=comp137527_c0_seq1 788 904 +;locus=RLOC_00009457
Chr1	stalkie_big_nohaplotig	exon	90762510	90762863	100	+	.	Parent=comp137527_c0_seq1.mrna1;Target=comp137527_c0_seq1 1 354 +
Chr1	stalkie_big_nohaplotig	exon	90763125	90763781	100	+	.	Parent=comp137527_c0_seq1.mrna1;Target=comp137527_c0_seq1 355 1011 +
Chr1	stalkie_big_nohaplotig	CDS	90763558	90763674	.	+	0	Parent=comp137527_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90764800	90766561	.	+	.	ID=comp117019_c0_seq1.mrna1;geneID=comp117019_c0_seq1.path1;Name=comp117019_c0_seq1;Dir=indeterminatecoverage=97.9;identity=100.0;matches=1762;mismatches=0;indels=0;unknowns=0;Target=comp117019_c0_seq1 1800 39 .;CDS_Target=comp117019_c0_seq1 242 39 .;locus=RLOC_00009457
Chr1	stalkie_big_nohaplotig	exon	90764800	90766561	100	+	.	Parent=comp117019_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	90764800	90765003	.	+	0	Parent=comp117019_c0_seq1.mrna1
Chr1	gffcl	locus	90133290	90135893	.	+	.	ID=RLOC_00009459;geneIDs=comp157721_c3_seq1.path1;transcripts=comp157721_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90133290	90135893	.	+	.	ID=comp157721_c3_seq1.mrna1;geneID=comp157721_c3_seq1.path1;Name=comp157721_c3_seq1;Dir=indeterminatecoverage=98.3;identity=98.1;matches=2556;mismatches=48;indels=1;unknowns=0;Target=comp157721_c3_seq1 2620 16 .;CDS_Target=comp157721_c3_seq1 2537 2181 .;locus=RLOC_00009459
Chr1	stalkie_big_nohaplotig	exon	90133290	90135893	98	+	.	Parent=comp157721_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	90135454	90135810	.	+	0	Parent=comp157721_c3_seq1.mrna1
Chr1	gffcl	locus	90138137	90138494	.	+	.	ID=RLOC_00009460;geneIDs=comp138450_c1_seq1.path1;transcripts=comp138450_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90138137	90138494	.	+	.	ID=comp138450_c1_seq1.mrna1;geneID=comp138450_c1_seq1.path1;Name=comp138450_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=351;mismatches=7;indels=0;unknowns=0;Target=comp138450_c1_seq1 358 1 .;CDS_Target=comp138450_c1_seq1 147 70 .;locus=RLOC_00009460
Chr1	stalkie_big_nohaplotig	exon	90138137	90138494	98	+	.	Parent=comp138450_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	90138206	90138283	.	+	0	Parent=comp138450_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90263079	90263174	.	+	.	ID=comp163794_c1_seq1.mrna1;geneID=comp163794_c1_seq1.path1;Name=comp163794_c1_seq1;Dir=indeterminatecoverage=12.6;identity=100.0;matches=96;mismatches=0;indels=0;unknowns=0;Target=comp163794_c1_seq1 96 1 .;locus=RLOC_00009461
Chr1	stalkie_big_nohaplotig	exon	90263079	90263174	100	+	.	Parent=comp163794_c1_seq1.mrna1
Chr1	gffcl	locus	90267559	90275047	.	+	.	ID=RLOC_00009462;geneIDs=FBgn0031051.1.path1;transcripts=FBgn0031051.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90267559	90275047	.	+	.	ID=FBgn0031051.1.mrna1;geneID=FBgn0031051.1.path1;Name=FBgn0031051.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=3697;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009462
Chr1	stalkie_big_nohaplotig	exon	90267559	90268976	99	+	.	Parent=FBgn0031051.1.mrna1;Target=FBgn0031051.1 1418 1 .
Chr1	stalkie_big_nohaplotig	exon	90272767	90275047	99	+	.	Parent=FBgn0031051.1.mrna1;Target=FBgn0031051.1 3699 1419 .
Chr1	stalkie_big_nohaplotig	CDS	90267559	90268976	.	+	0	Parent=FBgn0031051.1.mrna1;Target=FBgn0031051.1 1418 1 .
Chr1	stalkie_big_nohaplotig	CDS	90272767	90275047	.	+	1	Parent=FBgn0031051.1.mrna1;Target=FBgn0031051.1 3699 1419 .
Chr1	gffcl	locus	90318777	90319786	.	+	.	ID=RLOC_00009463;geneIDs=FBgn0043903.3.path2;transcripts=FBgn0043903.3.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	90318777	90319786	.	+	.	ID=FBgn0043903.3.mrna2;geneID=FBgn0043903.3.path2;Name=FBgn0043903.3;Dir=indeterminatecoverage=28.0;identity=100.0;matches=1010;mismatches=0;indels=0;unknowns=0;Target=FBgn0043903.3 3606 2597 .;locus=RLOC_00009463
Chr1	stalkie_big_nohaplotig	exon	90318777	90319786	100	+	.	Parent=FBgn0043903.3.mrna2
Chr1	stalkie_big_nohaplotig	CDS	90318777	90319786	.	+	1	Parent=FBgn0043903.3.mrna2
Chr1	gffcl	locus	90362604	90363322	.	-	.	ID=RLOC_00009464;geneIDs=FBgn0010341.1.path1;transcripts=FBgn0010341.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90362604	90363322	.	-	.	ID=FBgn0010341.1.mrna1;geneID=FBgn0010341.1.path1;Name=FBgn0010341.1;Dir=sensecoverage=93.0;identity=100.0;matches=586;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009464
Chr1	stalkie_big_nohaplotig	exon	90362604	90362690	100	-	.	Parent=FBgn0010341.1.mrna1;Target=FBgn0010341.1 544 630 +
Chr1	stalkie_big_nohaplotig	exon	90362759	90362956	100	-	.	Parent=FBgn0010341.1.mrna1;Target=FBgn0010341.1 346 543 +
Chr1	stalkie_big_nohaplotig	exon	90363022	90363322	100	-	.	Parent=FBgn0010341.1.mrna1;Target=FBgn0010341.1 45 345 +
Chr1	stalkie_big_nohaplotig	CDS	90362604	90362690	.	-	0	Parent=FBgn0010341.1.mrna1;Target=FBgn0010341.1 544 630 +
Chr1	stalkie_big_nohaplotig	CDS	90362759	90362956	.	-	0	Parent=FBgn0010341.1.mrna1;Target=FBgn0010341.1 346 543 +
Chr1	stalkie_big_nohaplotig	CDS	90363022	90363321	.	-	0	Parent=FBgn0010341.1.mrna1;Target=FBgn0010341.1 46 345 +
Chr1	gffcl	locus	90391230	90392361	.	-	.	ID=RLOC_00009466;geneIDs=comp163325_c0_seq1.path9;transcripts=comp163325_c0_seq1.mrna9
Chr1	stalkie_big_nohaplotig	mRNA	90391230	90392361	.	-	.	ID=comp163325_c0_seq1.mrna9;geneID=comp163325_c0_seq1.path9;Name=comp163325_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1130;mismatches=2;indels=1;unknowns=0;Target=comp163325_c0_seq1 1133 1 .;CDS_Target=comp163325_c0_seq1 255 1 .;locus=RLOC_00009466
Chr1	stalkie_big_nohaplotig	exon	90391230	90392361	99	-	.	Parent=comp163325_c0_seq1.mrna9
Chr1	stalkie_big_nohaplotig	CDS	90392107	90392361	.	-	0	Parent=comp163325_c0_seq1.mrna9
Chr1	gffcl	locus	90398509	90400769	.	+	.	ID=RLOC_00009467;geneIDs=FBgn0086384.1.path1;transcripts=FBgn0086384.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90398509	90400769	.	+	.	ID=FBgn0086384.1.mrna1;geneID=FBgn0086384.1.path1;Name=FBgn0086384.1;Dir=sensecoverage=100.0;identity=100.0;matches=1857;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009467
Chr1	stalkie_big_nohaplotig	exon	90398509	90399065	100	+	.	Parent=FBgn0086384.1.mrna1;Target=FBgn0086384.1 1 557 +
Chr1	stalkie_big_nohaplotig	exon	90399127	90399229	100	+	.	Parent=FBgn0086384.1.mrna1;Target=FBgn0086384.1 558 660 +
Chr1	stalkie_big_nohaplotig	exon	90399377	90399586	100	+	.	Parent=FBgn0086384.1.mrna1;Target=FBgn0086384.1 661 870 +
Chr1	stalkie_big_nohaplotig	exon	90399724	90399960	100	+	.	Parent=FBgn0086384.1.mrna1;Target=FBgn0086384.1 871 1107 +
Chr1	stalkie_big_nohaplotig	exon	90400020	90400769	100	+	.	Parent=FBgn0086384.1.mrna1;Target=FBgn0086384.1 1108 1857 +
Chr1	stalkie_big_nohaplotig	CDS	90398509	90399065	.	+	0	Parent=FBgn0086384.1.mrna1;Target=FBgn0086384.1 1 557 +
Chr1	stalkie_big_nohaplotig	CDS	90399127	90399229	.	+	1	Parent=FBgn0086384.1.mrna1;Target=FBgn0086384.1 558 660 +
Chr1	stalkie_big_nohaplotig	CDS	90399377	90399586	.	+	0	Parent=FBgn0086384.1.mrna1;Target=FBgn0086384.1 661 870 +
Chr1	stalkie_big_nohaplotig	CDS	90399724	90399960	.	+	0	Parent=FBgn0086384.1.mrna1;Target=FBgn0086384.1 871 1107 +
Chr1	stalkie_big_nohaplotig	CDS	90400020	90400769	.	+	0	Parent=FBgn0086384.1.mrna1;Target=FBgn0086384.1 1108 1857 +
Chr1	gffcl	locus	90401257	90401986	.	-	.	ID=RLOC_00009468;geneIDs=comp60860_c0_seq1.path1;transcripts=comp60860_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90401257	90401986	.	-	.	ID=comp60860_c0_seq1.mrna1;geneID=comp60860_c0_seq1.path1;Name=comp60860_c0_seq1;Dir=antisensecoverage=97.5;identity=99.6;matches=673;mismatches=1;indels=2;unknowns=0;locus=RLOC_00009468
Chr1	stalkie_big_nohaplotig	exon	90401257	90401703	99	-	.	Parent=comp60860_c0_seq1.mrna1;Target=comp60860_c0_seq1 18 465 -
Chr1	stalkie_big_nohaplotig	exon	90401759	90401986	99	-	.	Parent=comp60860_c0_seq1.mrna1;Target=comp60860_c0_seq1 466 692 -
Chr1	stalkie_big_nohaplotig	CDS	90401569	90401703	.	-	1	Parent=comp60860_c0_seq1.mrna1;Target=comp60860_c0_seq1 330 465 .
Chr1	stalkie_big_nohaplotig	CDS	90401759	90401781	.	-	0	Parent=comp60860_c0_seq1.mrna1;Target=comp60860_c0_seq1 466 488 .
Chr1	gffcl	locus	90451149	92405621	.	-	.	ID=RLOC_00009469;geneIDs=comp7183_c0_seq1.path1;transcripts=comp7183_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90451149	92405621	.	-	.	ID=comp7183_c0_seq1.mrna1;geneID=comp7183_c0_seq1.path1;Name=comp7183_c0_seq1;Dir=indeterminatecoverage=88.5;identity=95.3;matches=184;mismatches=7;indels=2;unknowns=0;locus=RLOC_00009469
Chr1	stalkie_big_nohaplotig	exon	90451149	90451272	97	-	.	Parent=comp7183_c0_seq1.mrna1;Target=comp7183_c0_seq1 218 94 .
Chr1	stalkie_big_nohaplotig	exon	92405555	92405621	91	-	.	Parent=comp7183_c0_seq1.mrna1;Target=comp7183_c0_seq1 93 26 .
Chr1	stalkie_big_nohaplotig	CDS	90451264	90451272	.	-	1	Parent=comp7183_c0_seq1.mrna1;Target=comp7183_c0_seq1 102 94 .
Chr1	stalkie_big_nohaplotig	CDS	92405555	92405619	.	-	0	Parent=comp7183_c0_seq1.mrna1;Target=comp7183_c0_seq1 93 28 .
Chr1	gffcl	locus	90456729	90456767	.	+	.	ID=RLOC_00009472;geneIDs=comp131199_c3_seq1.path2;transcripts=comp131199_c3_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	90456729	90456767	.	+	.	ID=comp131199_c3_seq1.mrna2;geneID=comp131199_c3_seq1.path2;Name=comp131199_c3_seq1;Dir=indeterminatecoverage=6.1;identity=97.4;matches=38;mismatches=1;indels=0;unknowns=0;Target=comp131199_c3_seq1 635 597 .;locus=RLOC_00009472
Chr1	stalkie_big_nohaplotig	exon	90456729	90456767	97	+	.	Parent=comp131199_c3_seq1.mrna2
Chr1	gffcl	locus	90473622	90475042	.	-	.	ID=RLOC_00009473;geneIDs=FBgn0031054.4.path1,comp93179_c0_seq1.path1;transcripts=FBgn0031054.4.mrna1,comp93179_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90473622	90475042	.	-	.	ID=FBgn0031054.4.mrna1;geneID=FBgn0031054.4.path1;Name=FBgn0031054.4;Dir=sensecoverage=100.0;identity=100.0;matches=672;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009473
Chr1	stalkie_big_nohaplotig	exon	90473622	90473720	100	-	.	Parent=FBgn0031054.4.mrna1;Target=FBgn0031054.4 574 672 +
Chr1	stalkie_big_nohaplotig	exon	90474419	90474677	100	-	.	Parent=FBgn0031054.4.mrna1;Target=FBgn0031054.4 315 573 +
Chr1	stalkie_big_nohaplotig	exon	90474729	90475042	100	-	.	Parent=FBgn0031054.4.mrna1;Target=FBgn0031054.4 1 314 +
Chr1	stalkie_big_nohaplotig	CDS	90473622	90473720	.	-	0	Parent=FBgn0031054.4.mrna1;Target=FBgn0031054.4 574 672 +
Chr1	stalkie_big_nohaplotig	CDS	90474419	90474677	.	-	1	Parent=FBgn0031054.4.mrna1;Target=FBgn0031054.4 315 573 +
Chr1	stalkie_big_nohaplotig	CDS	90474729	90475042	.	-	0	Parent=FBgn0031054.4.mrna1;Target=FBgn0031054.4 1 314 +
Chr1	stalkie_big_nohaplotig	mRNA	90473700	90474442	.	-	.	ID=comp93179_c0_seq1.mrna1;geneID=comp93179_c0_seq1.path1;Name=comp93179_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=527;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009473
Chr1	stalkie_big_nohaplotig	exon	90473700	90473720	100	-	.	Parent=comp93179_c0_seq1.mrna1;Target=comp93179_c0_seq1 509 529 +
Chr1	stalkie_big_nohaplotig	exon	90473935	90474442	99	-	.	Parent=comp93179_c0_seq1.mrna1;Target=comp93179_c0_seq1 1 508 +
Chr1	stalkie_big_nohaplotig	CDS	90473707	90473720	.	-	2	Parent=comp93179_c0_seq1.mrna1;Target=comp93179_c0_seq1 509 522 +
Chr1	stalkie_big_nohaplotig	CDS	90473935	90473995	.	-	0	Parent=comp93179_c0_seq1.mrna1;Target=comp93179_c0_seq1 448 508 +
Chr1	gffcl	locus	90504917	90507459	.	-	.	ID=RLOC_00009474;geneIDs=FBgn0031060.1.path1,comp152231_c0_seq1.path1;transcripts=comp152231_c0_seq1.mrna1,FBgn0031060.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90504917	90507459	.	-	.	ID=comp152231_c0_seq1.mrna1;geneID=comp152231_c0_seq1.path1;Name=comp152231_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=2406;mismatches=0;indels=7;unknowns=0;Target=comp152231_c0_seq1 1389 1838 .;locus=RLOC_00009474
Chr1	stalkie_big_nohaplotig	exon	90504917	90507034	99	-	.	Parent=comp152231_c0_seq1.mrna1;Target=comp152231_c0_seq1 1 2125 -
Chr1	stalkie_big_nohaplotig	exon	90507172	90507459	100	-	.	Parent=comp152231_c0_seq1.mrna1;Target=comp152231_c0_seq1 2126 2413 -
Chr1	stalkie_big_nohaplotig	CDS	90506298	90506747	.	-	0	Parent=comp152231_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90505880	90507356	.	-	.	ID=FBgn0031060.1.mrna1;geneID=FBgn0031060.1.path1;Name=FBgn0031060.1;Dir=sensecoverage=100.0;identity=100.0;matches=1212;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009474
Chr1	stalkie_big_nohaplotig	exon	90505880	90506310	100	-	.	Parent=FBgn0031060.1.mrna1;Target=FBgn0031060.1 782 1212 +
Chr1	stalkie_big_nohaplotig	exon	90506372	90506833	100	-	.	Parent=FBgn0031060.1.mrna1;Target=FBgn0031060.1 320 781 +
Chr1	stalkie_big_nohaplotig	exon	90506901	90507034	100	-	.	Parent=FBgn0031060.1.mrna1;Target=FBgn0031060.1 186 319 +
Chr1	stalkie_big_nohaplotig	exon	90507172	90507356	100	-	.	Parent=FBgn0031060.1.mrna1;Target=FBgn0031060.1 1 185 +
Chr1	stalkie_big_nohaplotig	CDS	90505880	90506310	.	-	2	Parent=FBgn0031060.1.mrna1;Target=FBgn0031060.1 782 1212 +
Chr1	stalkie_big_nohaplotig	CDS	90506372	90506833	.	-	2	Parent=FBgn0031060.1.mrna1;Target=FBgn0031060.1 320 781 +
Chr1	stalkie_big_nohaplotig	CDS	90506901	90507034	.	-	1	Parent=FBgn0031060.1.mrna1;Target=FBgn0031060.1 186 319 +
Chr1	stalkie_big_nohaplotig	CDS	90507172	90507356	.	-	0	Parent=FBgn0031060.1.mrna1;Target=FBgn0031060.1 1 185 +
Chr1	gffcl	locus	90526810	90527141	.	-	.	ID=RLOC_00009475;geneIDs=comp162442_c1_seq1.path2;transcripts=comp162442_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	90526810	90527141	.	-	.	ID=comp162442_c1_seq1.mrna2;geneID=comp162442_c1_seq1.path2;Name=comp162442_c1_seq1;Dir=indeterminatecoverage=100.0;identity=92.2;matches=306;mismatches=11;indels=15;unknowns=0;Target=comp162442_c1_seq1 317 1 .;CDS_Target=comp162442_c1_seq1 55 2 .;locus=RLOC_00009475
Chr1	stalkie_big_nohaplotig	exon	90526810	90527141	92	-	.	Parent=comp162442_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	90527087	90527140	.	-	0	Parent=comp162442_c1_seq1.mrna2
Chr1	gffcl	locus	90531512	90534284	.	+	.	ID=RLOC_00009476;geneIDs=FBgn0043903.3.path1;transcripts=FBgn0043903.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90531512	90534284	.	+	.	ID=FBgn0043903.3.mrna1;geneID=FBgn0043903.3.path1;Name=FBgn0043903.3;Dir=sensecoverage=72.0;identity=100.0;matches=2596;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009476
Chr1	stalkie_big_nohaplotig	exon	90531512	90532638	100	+	.	Parent=FBgn0043903.3.mrna1;Target=FBgn0043903.3 1 1127 +
Chr1	stalkie_big_nohaplotig	exon	90532695	90533001	100	+	.	Parent=FBgn0043903.3.mrna1;Target=FBgn0043903.3 1128 1434 +
Chr1	stalkie_big_nohaplotig	exon	90533058	90533799	100	+	.	Parent=FBgn0043903.3.mrna1;Target=FBgn0043903.3 1435 2176 +
Chr1	stalkie_big_nohaplotig	exon	90533865	90534284	100	+	.	Parent=FBgn0043903.3.mrna1;Target=FBgn0043903.3 2177 2596 +
Chr1	stalkie_big_nohaplotig	CDS	90531512	90532638	.	+	0	Parent=FBgn0043903.3.mrna1;Target=FBgn0043903.3 1 1127 +
Chr1	stalkie_big_nohaplotig	CDS	90532695	90533001	.	+	1	Parent=FBgn0043903.3.mrna1;Target=FBgn0043903.3 1128 1434 +
Chr1	stalkie_big_nohaplotig	CDS	90533058	90533799	.	+	0	Parent=FBgn0043903.3.mrna1;Target=FBgn0043903.3 1435 2176 +
Chr1	stalkie_big_nohaplotig	CDS	90533865	90534284	.	+	2	Parent=FBgn0043903.3.mrna1;Target=FBgn0043903.3 2177 2596 +
Chr1	gffcl	locus	90573092	90573324	.	-	.	ID=RLOC_00009477;geneIDs=comp88811_c0_seq1.path1;transcripts=comp88811_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90573092	90573324	.	-	.	ID=comp88811_c0_seq1.mrna1;geneID=comp88811_c0_seq1.path1;Name=comp88811_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=228;mismatches=5;indels=0;unknowns=0;Target=comp88811_c0_seq1 233 1 .;CDS_Target=comp88811_c0_seq1 213 136 .;locus=RLOC_00009477
Chr1	stalkie_big_nohaplotig	exon	90573092	90573324	97	-	.	Parent=comp88811_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	90573112	90573189	.	-	0	Parent=comp88811_c0_seq1.mrna1
Chr1	gffcl	locus	90613547	90614395	.	+	.	ID=RLOC_00009478;geneIDs=comp136187_c1_seq1.path1;transcripts=comp136187_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90613547	90614395	.	+	.	ID=comp136187_c1_seq1.mrna1;geneID=comp136187_c1_seq1.path1;Name=comp136187_c1_seq1;Dir=indeterminatecoverage=100.0;identity=96.1;matches=828;mismatches=21;indels=13;unknowns=0;Target=comp136187_c1_seq1 862 1 .;CDS_Target=comp136187_c1_seq1 91 2 .;locus=RLOC_00009478
Chr1	stalkie_big_nohaplotig	exon	90613547	90614395	96	+	.	Parent=comp136187_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	90613548	90613637	.	+	0	Parent=comp136187_c1_seq1.mrna1
Chr1	gffcl	locus	90685003	90685952	.	+	.	ID=RLOC_00009480;geneIDs=comp163779_c0_seq1.path1;transcripts=comp163779_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90685003	90685952	.	+	.	ID=comp163779_c0_seq1.mrna1;geneID=comp163779_c0_seq1.path1;Name=comp163779_c0_seq1;Dir=indeterminatecoverage=97.7;identity=95.4;matches=911;mismatches=39;indels=5;unknowns=0;Target=comp163779_c0_seq1 955 1 .;CDS_Target=comp163779_c0_seq1 729 544 .;locus=RLOC_00009480
Chr1	stalkie_big_nohaplotig	exon	90685003	90685952	95	+	.	Parent=comp163779_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	90685541	90685726	.	+	0	Parent=comp163779_c0_seq1.mrna1
Chr1	gffcl	locus	90730150	90732726	.	-	.	ID=RLOC_00009482;geneIDs=comp159502_c2_seq1.path1;transcripts=comp159502_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90730150	90732726	.	-	.	ID=comp159502_c2_seq1.mrna1;geneID=comp159502_c2_seq1.path1;Name=comp159502_c2_seq1;Dir=indeterminatecoverage=100.0;identity=89.2;matches=2330;mismatches=228;indels=53;unknowns=0;Target=comp159502_c2_seq1 2592 1 .;CDS_Target=comp159502_c2_seq1 1047 1 .;locus=RLOC_00009482
Chr1	stalkie_big_nohaplotig	exon	90730150	90732726	89	-	.	Parent=comp159502_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	90731679	90732726	.	-	0	Parent=comp159502_c2_seq1.mrna1
Chr1	gffcl	locus	90759811	90760871	.	-	.	ID=RLOC_00009484;geneIDs=FBgn0031065.1.path1;transcripts=FBgn0031065.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90759811	90760871	.	-	.	ID=FBgn0031065.1.mrna1;geneID=FBgn0031065.1.path1;Name=FBgn0031065.1;Dir=sensecoverage=75.5;identity=99.9;matches=875;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009484
Chr1	stalkie_big_nohaplotig	exon	90759811	90759987	100	-	.	Parent=FBgn0031065.1.mrna1;Target=FBgn0031065.1 985 1161 +
Chr1	stalkie_big_nohaplotig	exon	90760050	90760319	100	-	.	Parent=FBgn0031065.1.mrna1;Target=FBgn0031065.1 715 984 +
Chr1	stalkie_big_nohaplotig	exon	90760383	90760547	99	-	.	Parent=FBgn0031065.1.mrna1;Target=FBgn0031065.1 550 714 +
Chr1	stalkie_big_nohaplotig	exon	90760608	90760871	100	-	.	Parent=FBgn0031065.1.mrna1;Target=FBgn0031065.1 286 549 +
Chr1	stalkie_big_nohaplotig	CDS	90759811	90759987	.	-	0	Parent=FBgn0031065.1.mrna1;Target=FBgn0031065.1 985 1161 +
Chr1	stalkie_big_nohaplotig	CDS	90760050	90760319	.	-	0	Parent=FBgn0031065.1.mrna1;Target=FBgn0031065.1 715 984 +
Chr1	stalkie_big_nohaplotig	CDS	90760383	90760547	.	-	0	Parent=FBgn0031065.1.mrna1;Target=FBgn0031065.1 550 714 +
Chr1	stalkie_big_nohaplotig	CDS	90760608	90760871	.	-	0	Parent=FBgn0031065.1.mrna1;Target=FBgn0031065.1 286 549 +
Chr1	gffcl	locus	90787946	90887331	.	.	.	ID=RLOC_00009485;geneIDs=comp148129_c0_seq1.path1,comp163212_c0_seq1.path1;transcripts=comp163212_c0_seq1.mrna1,comp148129_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90787946	90887331	.	-	.	ID=comp163212_c0_seq1.mrna1;geneID=comp163212_c0_seq1.path1;Name=comp163212_c0_seq1;Dir=indeterminatecoverage=60.3;identity=96.4;matches=1354;mismatches=27;indels=23;unknowns=0;Target=comp163212_c0_seq1 1167 1117 .;locus=RLOC_00009485
Chr1	stalkie_big_nohaplotig	exon	90787946	90787953	100	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1497 1490 .
Chr1	stalkie_big_nohaplotig	exon	90793007	90793027	48	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1489 1457 .
Chr1	stalkie_big_nohaplotig	exon	90793608	90793615	75	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1456 1449 .
Chr1	stalkie_big_nohaplotig	exon	90799935	90799963	77	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1448 1418 .
Chr1	stalkie_big_nohaplotig	exon	90805614	90805618	100	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1417 1413 .
Chr1	stalkie_big_nohaplotig	exon	90810766	90810771	100	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1412 1407 .
Chr1	stalkie_big_nohaplotig	exon	90816476	90816484	77	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1406 1398 .
Chr1	stalkie_big_nohaplotig	exon	90819942	90819951	90	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1397 1388 .
Chr1	stalkie_big_nohaplotig	exon	90821688	90821697	100	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1387 1378 .
Chr1	stalkie_big_nohaplotig	exon	90823844	90823847	100	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1377 1374 .
Chr1	stalkie_big_nohaplotig	exon	90825597	90825599	100	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1373 1371 .
Chr1	stalkie_big_nohaplotig	exon	90827409	90827414	100	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1370 1365 .
Chr1	stalkie_big_nohaplotig	exon	90833861	90833867	71	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1364 1358 .
Chr1	stalkie_big_nohaplotig	exon	90835825	90835826	100	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1357 1356 .
Chr1	stalkie_big_nohaplotig	exon	90855131	90855146	81	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1355 1340 .
Chr1	stalkie_big_nohaplotig	exon	90862724	90862736	84	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1333 1321 .
Chr1	stalkie_big_nohaplotig	exon	90866446	90866456	100	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1320 1310 .
Chr1	stalkie_big_nohaplotig	exon	90866491	90866499	100	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1254 1246 .
Chr1	stalkie_big_nohaplotig	exon	90866706	90866713	100	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1236 1229 .
Chr1	stalkie_big_nohaplotig	exon	90867887	90867891	100	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1228 1224 .
Chr1	stalkie_big_nohaplotig	exon	90869152	90869158	100	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1223 1217 .
Chr1	stalkie_big_nohaplotig	exon	90871796	90871800	100	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1216 1212 .
Chr1	stalkie_big_nohaplotig	exon	90877583	90877587	100	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1211 1207 .
Chr1	stalkie_big_nohaplotig	exon	90885312	90885322	90	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1182 1172 .
Chr1	stalkie_big_nohaplotig	exon	90886170	90887331	98	-	.	Parent=comp163212_c0_seq1.mrna1;Target=comp163212_c0_seq1 1171 1 .
Chr1	stalkie_big_nohaplotig	CDS	90886174	90886224	.	-	0	Parent=comp163212_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90799463	90799957	.	+	.	ID=comp148129_c0_seq1.mrna1;geneID=comp148129_c0_seq1.path1;Name=comp148129_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=490;mismatches=5;indels=0;unknowns=0;Target=comp148129_c0_seq1 495 1 .;CDS_Target=comp148129_c0_seq1 90 34 .;locus=RLOC_00009485
Chr1	stalkie_big_nohaplotig	exon	90799463	90799957	98	+	.	Parent=comp148129_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	90799496	90799552	.	+	0	Parent=comp148129_c0_seq1.mrna1
Chr1	gffcl	locus	90790391	90791956	.	-	.	ID=RLOC_00009486;geneIDs=FBgn0020381.1.path1;transcripts=FBgn0020381.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90790391	90791956	.	-	.	ID=FBgn0020381.1.mrna1;geneID=FBgn0020381.1.path1;Name=FBgn0020381.1;Dir=sensecoverage=86.4;identity=100.0;matches=1343;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009486
Chr1	stalkie_big_nohaplotig	exon	90790391	90790476	100	-	.	Parent=FBgn0020381.1.mrna1;Target=FBgn0020381.1 1258 1343 +
Chr1	stalkie_big_nohaplotig	exon	90790526	90790662	100	-	.	Parent=FBgn0020381.1.mrna1;Target=FBgn0020381.1 1121 1257 +
Chr1	stalkie_big_nohaplotig	exon	90790717	90790927	100	-	.	Parent=FBgn0020381.1.mrna1;Target=FBgn0020381.1 910 1120 +
Chr1	stalkie_big_nohaplotig	exon	90790986	90791747	100	-	.	Parent=FBgn0020381.1.mrna1;Target=FBgn0020381.1 148 909 +
Chr1	stalkie_big_nohaplotig	exon	90791810	90791956	100	-	.	Parent=FBgn0020381.1.mrna1;Target=FBgn0020381.1 1 147 +
Chr1	stalkie_big_nohaplotig	CDS	90790393	90790476	.	-	0	Parent=FBgn0020381.1.mrna1;Target=FBgn0020381.1 1258 1341 +
Chr1	stalkie_big_nohaplotig	CDS	90790526	90790662	.	-	2	Parent=FBgn0020381.1.mrna1;Target=FBgn0020381.1 1121 1257 +
Chr1	stalkie_big_nohaplotig	CDS	90790717	90790927	.	-	0	Parent=FBgn0020381.1.mrna1;Target=FBgn0020381.1 910 1120 +
Chr1	stalkie_big_nohaplotig	CDS	90790986	90791747	.	-	0	Parent=FBgn0020381.1.mrna1;Target=FBgn0020381.1 148 909 +
Chr1	stalkie_big_nohaplotig	CDS	90791810	90791956	.	-	0	Parent=FBgn0020381.1.mrna1;Target=FBgn0020381.1 1 147 +
Chr1	gffcl	locus	90800468	90801175	.	-	.	ID=RLOC_00009487;geneIDs=FBgn0030269.1.path1;transcripts=FBgn0030269.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90800468	90801175	.	-	.	ID=FBgn0030269.1.mrna1;geneID=FBgn0030269.1.path1;Name=FBgn0030269.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=708;mismatches=0;indels=0;unknowns=0;Target=FBgn0030269.1 708 1 .;locus=RLOC_00009487
Chr1	stalkie_big_nohaplotig	exon	90800468	90801175	100	-	.	Parent=FBgn0030269.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	90800468	90801175	.	-	0	Parent=FBgn0030269.1.mrna1
Chr1	gffcl	locus	90802902	90805390	.	+	.	ID=RLOC_00009488;geneIDs=FBgn0030268.1.path1;transcripts=FBgn0030268.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90802902	90805390	.	+	.	ID=FBgn0030268.1.mrna1;geneID=FBgn0030268.1.path1;Name=FBgn0030268.1;Dir=sensecoverage=100.0;identity=100.0;matches=2238;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009488
Chr1	stalkie_big_nohaplotig	exon	90802902	90803857	100	+	.	Parent=FBgn0030268.1.mrna1;Target=FBgn0030268.1 1 956 +
Chr1	stalkie_big_nohaplotig	exon	90803986	90804232	100	+	.	Parent=FBgn0030268.1.mrna1;Target=FBgn0030268.1 957 1203 +
Chr1	stalkie_big_nohaplotig	exon	90804293	90805012	100	+	.	Parent=FBgn0030268.1.mrna1;Target=FBgn0030268.1 1204 1923 +
Chr1	stalkie_big_nohaplotig	exon	90805076	90805390	100	+	.	Parent=FBgn0030268.1.mrna1;Target=FBgn0030268.1 1924 2238 +
Chr1	stalkie_big_nohaplotig	CDS	90802902	90803857	.	+	0	Parent=FBgn0030268.1.mrna1;Target=FBgn0030268.1 1 956 +
Chr1	stalkie_big_nohaplotig	CDS	90803986	90804232	.	+	1	Parent=FBgn0030268.1.mrna1;Target=FBgn0030268.1 957 1203 +
Chr1	stalkie_big_nohaplotig	CDS	90804293	90805012	.	+	0	Parent=FBgn0030268.1.mrna1;Target=FBgn0030268.1 1204 1923 +
Chr1	stalkie_big_nohaplotig	CDS	90805076	90805390	.	+	0	Parent=FBgn0030268.1.mrna1;Target=FBgn0030268.1 1924 2238 +
Chr1	gffcl	locus	90806564	90806925	.	-	.	ID=RLOC_00009489;geneIDs=comp148087_c0_seq1.path1;transcripts=comp148087_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90806564	90806925	.	-	.	ID=comp148087_c0_seq1.mrna1;geneID=comp148087_c0_seq1.path1;Name=comp148087_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=362;mismatches=0;indels=0;unknowns=0;Target=comp148087_c0_seq1 362 1 .;CDS_Target=comp148087_c0_seq1 134 54 .;locus=RLOC_00009489
Chr1	stalkie_big_nohaplotig	exon	90806564	90806925	100	-	.	Parent=comp148087_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	90806792	90806872	.	-	0	Parent=comp148087_c0_seq1.mrna1
Chr1	gffcl	locus	90816663	90817092	.	+	.	ID=RLOC_00009490;geneIDs=FBgn0030272.1.path1;transcripts=FBgn0030272.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90816663	90817092	.	+	.	ID=FBgn0030272.1.mrna1;geneID=FBgn0030272.1.path1;Name=FBgn0030272.1;Dir=sensecoverage=100.0;identity=100.0;matches=309;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009490
Chr1	stalkie_big_nohaplotig	exon	90816663	90816732	100	+	.	Parent=FBgn0030272.1.mrna1;Target=FBgn0030272.1 1 70 +
Chr1	stalkie_big_nohaplotig	exon	90816792	90816954	100	+	.	Parent=FBgn0030272.1.mrna1;Target=FBgn0030272.1 71 233 +
Chr1	stalkie_big_nohaplotig	exon	90817017	90817092	100	+	.	Parent=FBgn0030272.1.mrna1;Target=FBgn0030272.1 234 309 +
Chr1	stalkie_big_nohaplotig	CDS	90816663	90816732	.	+	0	Parent=FBgn0030272.1.mrna1;Target=FBgn0030272.1 1 70 +
Chr1	stalkie_big_nohaplotig	CDS	90816792	90816954	.	+	2	Parent=FBgn0030272.1.mrna1;Target=FBgn0030272.1 71 233 +
Chr1	stalkie_big_nohaplotig	CDS	90817017	90817092	.	+	1	Parent=FBgn0030272.1.mrna1;Target=FBgn0030272.1 234 309 +
Chr1	gffcl	locus	90839109	90840428	.	+	.	ID=RLOC_00009491;geneIDs=comp136257_c0_seq1.path1;transcripts=comp136257_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90839109	90840428	.	+	.	ID=comp136257_c0_seq1.mrna1;geneID=comp136257_c0_seq1.path1;Name=comp136257_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1307;mismatches=0;indels=13;unknowns=0;Target=comp136257_c0_seq1 1307 1 .;CDS_Target=comp136257_c0_seq1 1031 825 .;locus=RLOC_00009491
Chr1	stalkie_big_nohaplotig	exon	90839109	90840428	99	+	.	Parent=comp136257_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	90839946	90840152	.	+	0	Parent=comp136257_c0_seq1.mrna1
Chr1	gffcl	locus	90841859	90843865	.	-	.	ID=RLOC_00009492;geneIDs=FBgn0020255.1.path1;transcripts=FBgn0020255.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90841859	90843865	.	-	.	ID=FBgn0020255.1.mrna1;geneID=FBgn0020255.1.path1;Name=FBgn0020255.1;Dir=sensecoverage=100.0;identity=100.0;matches=690;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009492
Chr1	stalkie_big_nohaplotig	exon	90841859	90842071	100	-	.	Parent=FBgn0020255.1.mrna1;Target=FBgn0020255.1 478 690 +
Chr1	stalkie_big_nohaplotig	exon	90842141	90842602	100	-	.	Parent=FBgn0020255.1.mrna1;Target=FBgn0020255.1 16 477 +
Chr1	stalkie_big_nohaplotig	exon	90843851	90843865	100	-	.	Parent=FBgn0020255.1.mrna1;Target=FBgn0020255.1 1 15 +
Chr1	stalkie_big_nohaplotig	CDS	90841859	90842071	.	-	0	Parent=FBgn0020255.1.mrna1;Target=FBgn0020255.1 478 690 +
Chr1	stalkie_big_nohaplotig	CDS	90842141	90842602	.	-	0	Parent=FBgn0020255.1.mrna1;Target=FBgn0020255.1 16 477 +
Chr1	stalkie_big_nohaplotig	CDS	90843851	90843865	.	-	0	Parent=FBgn0020255.1.mrna1;Target=FBgn0020255.1 1 15 +
Chr1	gffcl	locus	90874833	90875818	.	-	.	ID=RLOC_00009493;geneIDs=comp162746_c0_seq1.path1;transcripts=comp162746_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90874833	90875818	.	-	.	ID=comp162746_c0_seq1.mrna1;geneID=comp162746_c0_seq1.path1;Name=comp162746_c0_seq1;Dir=indeterminatecoverage=90.9;identity=99.4;matches=981;mismatches=5;indels=1;unknowns=0;Target=comp162746_c0_seq1 1086 100 .;CDS_Target=comp162746_c0_seq1 961 521 .;locus=RLOC_00009493
Chr1	stalkie_big_nohaplotig	exon	90874833	90875818	99	-	.	Parent=comp162746_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	90874957	90875397	.	-	0	Parent=comp162746_c0_seq1.mrna1
Chr1	gffcl	locus	90881174	90883229	.	-	.	ID=RLOC_00009494;geneIDs=comp163899_c0_seq1.path1;transcripts=comp163899_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90881174	90883229	.	-	.	ID=comp163899_c0_seq1.mrna1;geneID=comp163899_c0_seq1.path1;Name=comp163899_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2055;mismatches=1;indels=1;unknowns=0;Target=comp163899_c0_seq1 2057 1 .;CDS_Target=comp163899_c0_seq1 542 393 .;locus=RLOC_00009494
Chr1	stalkie_big_nohaplotig	exon	90881174	90883229	99	-	.	Parent=comp163899_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	90882689	90882837	.	-	0	Parent=comp163899_c0_seq1.mrna1
Chr1	gffcl	locus	90895652	90896350	.	+	.	ID=RLOC_00009495;geneIDs=comp151148_c0_seq1.path1;transcripts=comp151148_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90895652	90896350	.	+	.	ID=comp151148_c0_seq1.mrna1;geneID=comp151148_c0_seq1.path1;Name=comp151148_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=591;mismatches=2;indels=1;unknowns=0;Target=comp151148_c0_seq1 66 1 .;locus=RLOC_00009495
Chr1	stalkie_big_nohaplotig	exon	90895652	90895913	100	+	.	Parent=comp151148_c0_seq1.mrna1;Target=comp151148_c0_seq1 262 1 .
Chr1	stalkie_big_nohaplotig	exon	90896019	90896350	99	+	.	Parent=comp151148_c0_seq1.mrna1;Target=comp151148_c0_seq1 593 263 .
Chr1	stalkie_big_nohaplotig	CDS	90895652	90895717	.	+	0	Parent=comp151148_c0_seq1.mrna1
Chr1	gffcl	locus	90966170	90975856	.	+	.	ID=RLOC_00009496;geneIDs=comp156581_c0_seq1.path1;transcripts=comp156581_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90966170	90975856	.	+	.	ID=comp156581_c0_seq1.mrna1;geneID=comp156581_c0_seq1.path1;Name=comp156581_c0_seq1;Dir=antisensecoverage=100.0;identity=99.0;matches=1098;mismatches=11;indels=0;unknowns=0;Target=comp156581_c0_seq1 90 317 .;locus=RLOC_00009496
Chr1	stalkie_big_nohaplotig	exon	90966170	90966216	100	+	.	Parent=comp156581_c0_seq1.mrna1;Target=comp156581_c0_seq1 1063 1109 -
Chr1	stalkie_big_nohaplotig	exon	90974795	90975856	98	+	.	Parent=comp156581_c0_seq1.mrna1;Target=comp156581_c0_seq1 1 1062 -
Chr1	stalkie_big_nohaplotig	CDS	90975540	90975767	.	+	0	Parent=comp156581_c0_seq1.mrna1
Chr1	gffcl	locus	90991902	90994567	.	+	.	ID=RLOC_00009497;geneIDs=FBgn0035981.1.path2;transcripts=FBgn0035981.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	90991902	90994567	.	+	.	ID=FBgn0035981.1.mrna2;geneID=FBgn0035981.1.path2;Name=FBgn0035981.1;Dir=sensecoverage=96.0;identity=99.5;matches=1101;mismatches=5;indels=0;unknowns=0;locus=RLOC_00009497
Chr1	stalkie_big_nohaplotig	exon	90991902	90991960	96	+	.	Parent=FBgn0035981.1.mrna2;Target=FBgn0035981.1 47 105 +
Chr1	stalkie_big_nohaplotig	exon	90992244	90992308	100	+	.	Parent=FBgn0035981.1.mrna2;Target=FBgn0035981.1 106 170 +
Chr1	stalkie_big_nohaplotig	exon	90992390	90992503	99	+	.	Parent=FBgn0035981.1.mrna2;Target=FBgn0035981.1 171 284 +
Chr1	stalkie_big_nohaplotig	exon	90993295	90993388	100	+	.	Parent=FBgn0035981.1.mrna2;Target=FBgn0035981.1 285 378 +
Chr1	stalkie_big_nohaplotig	exon	90993735	90994163	100	+	.	Parent=FBgn0035981.1.mrna2;Target=FBgn0035981.1 379 807 +
Chr1	stalkie_big_nohaplotig	exon	90994223	90994567	99	+	.	Parent=FBgn0035981.1.mrna2;Target=FBgn0035981.1 808 1152 +
Chr1	stalkie_big_nohaplotig	CDS	90991902	90991960	.	+	1	Parent=FBgn0035981.1.mrna2;Target=FBgn0035981.1 47 105 +
Chr1	stalkie_big_nohaplotig	CDS	90992244	90992308	.	+	2	Parent=FBgn0035981.1.mrna2;Target=FBgn0035981.1 106 170 +
Chr1	stalkie_big_nohaplotig	CDS	90992390	90992503	.	+	0	Parent=FBgn0035981.1.mrna2;Target=FBgn0035981.1 171 284 +
Chr1	stalkie_big_nohaplotig	CDS	90993295	90993388	.	+	0	Parent=FBgn0035981.1.mrna2;Target=FBgn0035981.1 285 378 +
Chr1	stalkie_big_nohaplotig	CDS	90993735	90994163	.	+	2	Parent=FBgn0035981.1.mrna2;Target=FBgn0035981.1 379 807 +
Chr1	stalkie_big_nohaplotig	CDS	90994223	90994567	.	+	2	Parent=FBgn0035981.1.mrna2;Target=FBgn0035981.1 808 1152 +
Chr1	gffcl	locus	90996320	90997150	.	-	.	ID=RLOC_00009498;geneIDs=FBgn0011769.1.path1;transcripts=FBgn0011769.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90996320	90997150	.	-	.	ID=FBgn0011769.1.mrna1;geneID=FBgn0011769.1.path1;Name=FBgn0011769.1;Dir=sensecoverage=100.0;identity=99.4;matches=510;mismatches=3;indels=0;unknowns=0;locus=RLOC_00009498
Chr1	stalkie_big_nohaplotig	exon	90996320	90996561	99	-	.	Parent=FBgn0011769.1.mrna1;Target=FBgn0011769.1 272 513 +
Chr1	stalkie_big_nohaplotig	exon	90996756	90996862	100	-	.	Parent=FBgn0011769.1.mrna1;Target=FBgn0011769.1 165 271 +
Chr1	stalkie_big_nohaplotig	exon	90996933	90996984	98	-	.	Parent=FBgn0011769.1.mrna1;Target=FBgn0011769.1 113 164 +
Chr1	stalkie_big_nohaplotig	exon	90997039	90997150	100	-	.	Parent=FBgn0011769.1.mrna1;Target=FBgn0011769.1 1 112 +
Chr1	stalkie_big_nohaplotig	CDS	90996320	90996561	.	-	2	Parent=FBgn0011769.1.mrna1;Target=FBgn0011769.1 272 513 +
Chr1	stalkie_big_nohaplotig	CDS	90996756	90996862	.	-	1	Parent=FBgn0011769.1.mrna1;Target=FBgn0011769.1 165 271 +
Chr1	stalkie_big_nohaplotig	CDS	90996933	90996984	.	-	2	Parent=FBgn0011769.1.mrna1;Target=FBgn0011769.1 113 164 +
Chr1	stalkie_big_nohaplotig	CDS	90997039	90997150	.	-	0	Parent=FBgn0011769.1.mrna1;Target=FBgn0011769.1 1 112 +
Chr1	gffcl	locus	90998142	91002329	.	+	.	ID=RLOC_00009499;geneIDs=FBgn0002899.1.path1;transcripts=FBgn0002899.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	90998142	91002329	.	+	.	ID=FBgn0002899.1.mrna1;geneID=FBgn0002899.1.path1;Name=FBgn0002899.1;Dir=sensecoverage=100.0;identity=99.6;matches=3136;mismatches=14;indels=0;unknowns=0;locus=RLOC_00009499
Chr1	stalkie_big_nohaplotig	exon	90998142	90998934	99	+	.	Parent=FBgn0002899.1.mrna1;Target=FBgn0002899.1 1 793 +
Chr1	stalkie_big_nohaplotig	exon	90998988	90999166	98	+	.	Parent=FBgn0002899.1.mrna1;Target=FBgn0002899.1 794 972 +
Chr1	stalkie_big_nohaplotig	exon	90999263	90999536	99	+	.	Parent=FBgn0002899.1.mrna1;Target=FBgn0002899.1 973 1246 +
Chr1	stalkie_big_nohaplotig	exon	90999685	90999890	100	+	.	Parent=FBgn0002899.1.mrna1;Target=FBgn0002899.1 1247 1452 +
Chr1	stalkie_big_nohaplotig	exon	90999954	91000099	99	+	.	Parent=FBgn0002899.1.mrna1;Target=FBgn0002899.1 1453 1598 +
Chr1	stalkie_big_nohaplotig	exon	91000162	91000618	99	+	.	Parent=FBgn0002899.1.mrna1;Target=FBgn0002899.1 1599 2055 +
Chr1	stalkie_big_nohaplotig	exon	91000674	91001549	99	+	.	Parent=FBgn0002899.1.mrna1;Target=FBgn0002899.1 2056 2931 +
Chr1	stalkie_big_nohaplotig	exon	91002022	91002156	100	+	.	Parent=FBgn0002899.1.mrna1;Target=FBgn0002899.1 2932 3066 +
Chr1	stalkie_big_nohaplotig	exon	91002246	91002329	100	+	.	Parent=FBgn0002899.1.mrna1;Target=FBgn0002899.1 3067 3150 +
Chr1	stalkie_big_nohaplotig	CDS	90998142	90998934	.	+	0	Parent=FBgn0002899.1.mrna1;Target=FBgn0002899.1 1 793 +
Chr1	stalkie_big_nohaplotig	CDS	90998988	90999166	.	+	2	Parent=FBgn0002899.1.mrna1;Target=FBgn0002899.1 794 972 +
Chr1	stalkie_big_nohaplotig	CDS	90999263	90999536	.	+	0	Parent=FBgn0002899.1.mrna1;Target=FBgn0002899.1 973 1246 +
Chr1	stalkie_big_nohaplotig	CDS	90999685	90999890	.	+	2	Parent=FBgn0002899.1.mrna1;Target=FBgn0002899.1 1247 1452 +
Chr1	stalkie_big_nohaplotig	CDS	90999954	91000099	.	+	0	Parent=FBgn0002899.1.mrna1;Target=FBgn0002899.1 1453 1598 +
Chr1	stalkie_big_nohaplotig	CDS	91000162	91000618	.	+	1	Parent=FBgn0002899.1.mrna1;Target=FBgn0002899.1 1599 2055 +
Chr1	stalkie_big_nohaplotig	CDS	91000674	91001549	.	+	0	Parent=FBgn0002899.1.mrna1;Target=FBgn0002899.1 2056 2931 +
Chr1	stalkie_big_nohaplotig	CDS	91002022	91002156	.	+	0	Parent=FBgn0002899.1.mrna1;Target=FBgn0002899.1 2932 3066 +
Chr1	stalkie_big_nohaplotig	CDS	91002246	91002329	.	+	0	Parent=FBgn0002899.1.mrna1;Target=FBgn0002899.1 3067 3150 +
Chr1	gffcl	locus	91003479	91013298	.	-	.	ID=RLOC_00009500;geneIDs=FBgn0035844.1.path1;transcripts=FBgn0035844.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91003479	91013298	.	-	.	ID=FBgn0035844.1.mrna1;geneID=FBgn0035844.1.path1;Name=FBgn0035844.1;Dir=sensecoverage=100.0;identity=99.1;matches=2861;mismatches=11;indels=14;unknowns=0;locus=RLOC_00009500
Chr1	stalkie_big_nohaplotig	exon	91003479	91005507	99	-	.	Parent=FBgn0035844.1.mrna1;Target=FBgn0035844.1 852 2880 +
Chr1	stalkie_big_nohaplotig	exon	91005575	91005865	99	-	.	Parent=FBgn0035844.1.mrna1;Target=FBgn0035844.1 561 851 +
Chr1	stalkie_big_nohaplotig	exon	91005934	91006067	100	-	.	Parent=FBgn0035844.1.mrna1;Target=FBgn0035844.1 427 560 +
Chr1	stalkie_big_nohaplotig	exon	91006616	91006730	100	-	.	Parent=FBgn0035844.1.mrna1;Target=FBgn0035844.1 312 426 +
Chr1	stalkie_big_nohaplotig	exon	91009166	91009263	100	-	.	Parent=FBgn0035844.1.mrna1;Target=FBgn0035844.1 214 311 +
Chr1	stalkie_big_nohaplotig	exon	91010311	91010450	91	-	.	Parent=FBgn0035844.1.mrna1;Target=FBgn0035844.1 74 213 +
Chr1	stalkie_big_nohaplotig	exon	91013227	91013298	97	-	.	Parent=FBgn0035844.1.mrna1;Target=FBgn0035844.1 2 73 +
Chr1	stalkie_big_nohaplotig	CDS	91003479	91005507	.	-	1	Parent=FBgn0035844.1.mrna1;Target=FBgn0035844.1 852 2880 +
Chr1	stalkie_big_nohaplotig	CDS	91005575	91005865	.	-	1	Parent=FBgn0035844.1.mrna1;Target=FBgn0035844.1 561 851 +
Chr1	stalkie_big_nohaplotig	CDS	91005934	91006067	.	-	0	Parent=FBgn0035844.1.mrna1;Target=FBgn0035844.1 427 560 +
Chr1	stalkie_big_nohaplotig	CDS	91006616	91006730	.	-	1	Parent=FBgn0035844.1.mrna1;Target=FBgn0035844.1 312 426 +
Chr1	stalkie_big_nohaplotig	CDS	91009166	91009263	.	-	0	Parent=FBgn0035844.1.mrna1;Target=FBgn0035844.1 214 311 +
Chr1	stalkie_big_nohaplotig	CDS	91010311	91010450	.	-	2	Parent=FBgn0035844.1.mrna1;Target=FBgn0035844.1 74 213 +
Chr1	stalkie_big_nohaplotig	CDS	91013227	91013296	.	-	0	Parent=FBgn0035844.1.mrna1;Target=FBgn0035844.1 4 73 +
Chr1	gffcl	locus	91060574	91129620	.	-	.	ID=RLOC_00009501;geneIDs=FBgn0031053.1.path1;transcripts=FBgn0031053.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91060574	91129620	.	-	.	ID=FBgn0031053.1.mrna1;geneID=FBgn0031053.1.path1;Name=FBgn0031053.1;Dir=sensecoverage=61.1;identity=96.2;matches=767;mismatches=15;indels=15;unknowns=0;locus=RLOC_00009501
Chr1	stalkie_big_nohaplotig	exon	91060574	91060578	100	-	.	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 793 797 +
Chr1	stalkie_big_nohaplotig	exon	91063544	91063548	100	-	.	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 788 792 +
Chr1	stalkie_big_nohaplotig	exon	91067182	91067194	76	-	.	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 775 787 +
Chr1	stalkie_big_nohaplotig	exon	91080716	91080718	100	-	.	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 772 774 +
Chr1	stalkie_big_nohaplotig	exon	91100229	91100238	100	-	.	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 762 771 +
Chr1	stalkie_big_nohaplotig	exon	91107618	91107650	50	-	.	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 714 761 +
Chr1	stalkie_big_nohaplotig	exon	91115239	91115245	100	-	.	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 707 713 +
Chr1	stalkie_big_nohaplotig	exon	91116213	91116214	100	-	.	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 705 706 +
Chr1	stalkie_big_nohaplotig	exon	91118290	91118292	100	-	.	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 702 704 +
Chr1	stalkie_big_nohaplotig	exon	91121146	91121157	75	-	.	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 690 701 +
Chr1	stalkie_big_nohaplotig	exon	91128877	91129093	100	-	.	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 473 689 +
Chr1	stalkie_big_nohaplotig	exon	91129149	91129620	100	-	.	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 1 472 +
Chr1	stalkie_big_nohaplotig	CDS	91060574	91060578	.	-	0	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 793 797 +
Chr1	stalkie_big_nohaplotig	CDS	91063544	91063548	.	-	2	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 788 792 +
Chr1	stalkie_big_nohaplotig	CDS	91067182	91067194	.	-	0	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 775 787 +
Chr1	stalkie_big_nohaplotig	CDS	91080716	91080718	.	-	0	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 772 774 +
Chr1	stalkie_big_nohaplotig	CDS	91100229	91100238	.	-	1	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 762 771 +
Chr1	stalkie_big_nohaplotig	CDS	91107618	91107650	.	-	1	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 714 761 +
Chr1	stalkie_big_nohaplotig	CDS	91115239	91115245	.	-	2	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 707 713 +
Chr1	stalkie_big_nohaplotig	CDS	91116213	91116214	.	-	1	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 705 706 +
Chr1	stalkie_big_nohaplotig	CDS	91118290	91118292	.	-	1	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 702 704 +
Chr1	stalkie_big_nohaplotig	CDS	91121146	91121157	.	-	1	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 690 701 +
Chr1	stalkie_big_nohaplotig	CDS	91128877	91129093	.	-	2	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 473 689 +
Chr1	stalkie_big_nohaplotig	CDS	91129149	91129620	.	-	0	Parent=FBgn0031053.1.mrna1;Target=FBgn0031053.1 1 472 +
Chr1	gffcl	locus	91073093	91074868	.	+	.	ID=RLOC_00009502;geneIDs=FBgn0004057.1.path1;transcripts=FBgn0004057.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91073093	91074868	.	+	.	ID=FBgn0004057.1.mrna1;geneID=FBgn0004057.1.path1;Name=FBgn0004057.1;Dir=sensecoverage=98.2;identity=99.7;matches=1533;mismatches=5;indels=0;unknowns=0;locus=RLOC_00009502
Chr1	stalkie_big_nohaplotig	exon	91073093	91073211	98	+	.	Parent=FBgn0004057.1.mrna1;Target=FBgn0004057.1 29 147 +
Chr1	stalkie_big_nohaplotig	exon	91073315	91073461	100	+	.	Parent=FBgn0004057.1.mrna1;Target=FBgn0004057.1 148 294 +
Chr1	stalkie_big_nohaplotig	exon	91073533	91073750	100	+	.	Parent=FBgn0004057.1.mrna1;Target=FBgn0004057.1 295 512 +
Chr1	stalkie_big_nohaplotig	exon	91073815	91074868	99	+	.	Parent=FBgn0004057.1.mrna1;Target=FBgn0004057.1 513 1566 +
Chr1	stalkie_big_nohaplotig	CDS	91073095	91073211	.	+	0	Parent=FBgn0004057.1.mrna1;Target=FBgn0004057.1 31 147 +
Chr1	stalkie_big_nohaplotig	CDS	91073315	91073461	.	+	0	Parent=FBgn0004057.1.mrna1;Target=FBgn0004057.1 148 294 +
Chr1	stalkie_big_nohaplotig	CDS	91073533	91073750	.	+	0	Parent=FBgn0004057.1.mrna1;Target=FBgn0004057.1 295 512 +
Chr1	stalkie_big_nohaplotig	CDS	91073815	91074868	.	+	1	Parent=FBgn0004057.1.mrna1;Target=FBgn0004057.1 513 1566 +
Chr1	gffcl	locus	91079439	91080401	.	+	.	ID=RLOC_00009503;geneIDs=comp157701_c0_seq1.path1;transcripts=comp157701_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91079439	91080401	.	+	.	ID=comp157701_c0_seq1.mrna1;geneID=comp157701_c0_seq1.path1;Name=comp157701_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=911;mismatches=3;indels=0;unknowns=0;Target=comp157701_c0_seq1 869 627 .;locus=RLOC_00009503
Chr1	stalkie_big_nohaplotig	exon	91079439	91079978	99	+	.	Parent=comp157701_c0_seq1.mrna1;Target=comp157701_c0_seq1 540 1 .
Chr1	stalkie_big_nohaplotig	exon	91080028	91080401	100	+	.	Parent=comp157701_c0_seq1.mrna1;Target=comp157701_c0_seq1 914 541 .
Chr1	stalkie_big_nohaplotig	CDS	91080114	91080356	.	+	0	Parent=comp157701_c0_seq1.mrna1
Chr1	gffcl	locus	91130788	91131365	.	+	.	ID=RLOC_00009504;geneIDs=comp150720_c0_seq1.path1;transcripts=comp150720_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91130788	91131365	.	+	.	ID=comp150720_c0_seq1.mrna1;geneID=comp150720_c0_seq1.path1;Name=comp150720_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.8;matches=556;mismatches=14;indels=23;unknowns=0;Target=comp150720_c0_seq1 585 1 .;CDS_Target=comp150720_c0_seq1 181 2 .;locus=RLOC_00009504
Chr1	stalkie_big_nohaplotig	exon	91130788	91131365	93	+	.	Parent=comp150720_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	91130789	91130968	.	+	0	Parent=comp150720_c0_seq1.mrna1
Chr1	gffcl	locus	91189412	91200258	.	+	.	ID=RLOC_00009505;geneIDs=FBgn0031057.1.path1;transcripts=FBgn0031057.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91189412	91200258	.	+	.	ID=FBgn0031057.1.mrna1;geneID=FBgn0031057.1.path1;Name=FBgn0031057.1;Dir=sensecoverage=100.0;identity=100.0;matches=1569;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009505
Chr1	stalkie_big_nohaplotig	exon	91189412	91189522	100	+	.	Parent=FBgn0031057.1.mrna1;Target=FBgn0031057.1 1 111 +
Chr1	stalkie_big_nohaplotig	exon	91189868	91190543	100	+	.	Parent=FBgn0031057.1.mrna1;Target=FBgn0031057.1 112 787 +
Chr1	stalkie_big_nohaplotig	exon	91190599	91191306	100	+	.	Parent=FBgn0031057.1.mrna1;Target=FBgn0031057.1 788 1495 +
Chr1	stalkie_big_nohaplotig	exon	91200185	91200258	100	+	.	Parent=FBgn0031057.1.mrna1;Target=FBgn0031057.1 1496 1569 +
Chr1	stalkie_big_nohaplotig	CDS	91189412	91189522	.	+	0	Parent=FBgn0031057.1.mrna1;Target=FBgn0031057.1 1 111 +
Chr1	stalkie_big_nohaplotig	CDS	91189868	91190543	.	+	0	Parent=FBgn0031057.1.mrna1;Target=FBgn0031057.1 112 787 +
Chr1	stalkie_big_nohaplotig	CDS	91190599	91191306	.	+	2	Parent=FBgn0031057.1.mrna1;Target=FBgn0031057.1 788 1495 +
Chr1	stalkie_big_nohaplotig	CDS	91200185	91200258	.	+	2	Parent=FBgn0031057.1.mrna1;Target=FBgn0031057.1 1496 1569 +
Chr1	gffcl	locus	91194353	91194407	.	+	.	ID=RLOC_00009506;geneIDs=comp158135_c1_seq1.path1;transcripts=comp158135_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91194353	91194407	.	+	.	ID=comp158135_c1_seq1.mrna1;geneID=comp158135_c1_seq1.path1;Name=comp158135_c1_seq1;Dir=indeterminatecoverage=9.6;identity=100.0;matches=55;mismatches=0;indels=0;unknowns=0;Target=comp158135_c1_seq1 55 1 .;locus=RLOC_00009506
Chr1	stalkie_big_nohaplotig	exon	91194353	91194407	100	+	.	Parent=comp158135_c1_seq1.mrna1
Chr1	gffcl	locus	91194927	91195524	.	-	.	ID=RLOC_00009507;geneIDs=comp89649_c0_seq1.path1;transcripts=comp89649_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91194927	91195524	.	-	.	ID=comp89649_c0_seq1.mrna1;geneID=comp89649_c0_seq1.path1;Name=comp89649_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=598;mismatches=0;indels=0;unknowns=0;Target=comp89649_c0_seq1 598 1 .;CDS_Target=comp89649_c0_seq1 532 455 .;locus=RLOC_00009507
Chr1	stalkie_big_nohaplotig	exon	91194927	91195524	100	-	.	Parent=comp89649_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	91194993	91195070	.	-	0	Parent=comp89649_c0_seq1.mrna1
Chr1	gffcl	locus	91199728	91199775	.	+	.	ID=RLOC_00009508;geneIDs=comp150371_c0_seq1.path2;transcripts=comp150371_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	91199728	91199775	.	+	.	ID=comp150371_c0_seq1.mrna2;geneID=comp150371_c0_seq1.path2;Name=comp150371_c0_seq1;Dir=indeterminatecoverage=23.0;identity=97.9;matches=47;mismatches=1;indels=0;unknowns=0;Target=comp150371_c0_seq1 209 162 .;locus=RLOC_00009508
Chr1	stalkie_big_nohaplotig	exon	91199728	91199775	97	+	.	Parent=comp150371_c0_seq1.mrna2
Chr1	gffcl	locus	91199779	91200205	.	-	.	ID=RLOC_00009509;geneIDs=comp150371_c0_seq1.path1;transcripts=comp150371_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91199779	91200205	.	-	.	ID=comp150371_c0_seq1.mrna1;geneID=comp150371_c0_seq1.path1;Name=comp150371_c0_seq1;Dir=indeterminatecoverage=77.0;identity=100.0;matches=161;mismatches=0;indels=0;unknowns=0;Target=comp150371_c0_seq1 83 3 .;locus=RLOC_00009509
Chr1	stalkie_big_nohaplotig	exon	91199779	91199824	100	-	.	Parent=comp150371_c0_seq1.mrna1;Target=comp150371_c0_seq1 161 116 .
Chr1	stalkie_big_nohaplotig	exon	91200091	91200205	100	-	.	Parent=comp150371_c0_seq1.mrna1;Target=comp150371_c0_seq1 115 1 .
Chr1	stalkie_big_nohaplotig	CDS	91200123	91200203	.	-	0	Parent=comp150371_c0_seq1.mrna1
Chr1	gffcl	locus	91205849	91206424	.	-	.	ID=RLOC_00009511;geneIDs=comp158500_c0_seq1.path1;transcripts=comp158500_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91205849	91206424	.	-	.	ID=comp158500_c0_seq1.mrna1;geneID=comp158500_c0_seq1.path1;Name=comp158500_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=561;mismatches=12;indels=3;unknowns=0;Target=comp158500_c0_seq1 573 1 .;CDS_Target=comp158500_c0_seq1 571 410 .;locus=RLOC_00009511
Chr1	stalkie_big_nohaplotig	exon	91205849	91206424	97	-	.	Parent=comp158500_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	91205851	91206012	.	-	0	Parent=comp158500_c0_seq1.mrna1
Chr1	gffcl	locus	91206545	91207534	.	+	.	ID=RLOC_00009512;geneIDs=ORF2078.path3;transcripts=ORF2078.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	91206545	91207534	.	+	.	ID=ORF2078.mrna3;geneID=ORF2078.path3;Name=ORF2078;Dir=indeterminatecoverage=100.0;identity=98.4;matches=909;mismatches=15;indels=0;unknowns=0;locus=RLOC_00009512
Chr1	stalkie_big_nohaplotig	exon	91206545	91207389	98	+	.	Parent=ORF2078.mrna3;Target=ORF2078 845 1 .
Chr1	stalkie_big_nohaplotig	exon	91207456	91207534	98	+	.	Parent=ORF2078.mrna3;Target=ORF2078 924 846 .
Chr1	stalkie_big_nohaplotig	CDS	91206545	91207389	.	+	0	Parent=ORF2078.mrna3;Target=ORF2078 845 1 .
Chr1	stalkie_big_nohaplotig	CDS	91207456	91207534	.	+	1	Parent=ORF2078.mrna3;Target=ORF2078 924 846 .
Chr1	gffcl	locus	91253509	91253818	.	+	.	ID=RLOC_00009513;geneIDs=comp135181_c0_seq1.path1;transcripts=comp135181_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91253509	91253818	.	+	.	ID=comp135181_c0_seq1.mrna1;geneID=comp135181_c0_seq1.path1;Name=comp135181_c0_seq1;Dir=indeterminatecoverage=100.0;identity=87.7;matches=272;mismatches=37;indels=1;unknowns=0;Target=comp135181_c0_seq1 309 1 .;CDS_Target=comp135181_c0_seq1 259 2 .;locus=RLOC_00009513
Chr1	stalkie_big_nohaplotig	exon	91253509	91253818	87	+	.	Parent=comp135181_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	91253510	91253767	.	+	0	Parent=comp135181_c0_seq1.mrna1
Chr1	gffcl	locus	91302162	91305247	.	+	.	ID=RLOC_00009515;geneIDs=FBgn0026015.1.path1;transcripts=FBgn0026015.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91302162	91305247	.	+	.	ID=FBgn0026015.1.mrna1;geneID=FBgn0026015.1.path1;Name=FBgn0026015.1;Dir=sensecoverage=99.8;identity=100.0;matches=2577;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009515
Chr1	stalkie_big_nohaplotig	exon	91302162	91302267	100	+	.	Parent=FBgn0026015.1.mrna1;Target=FBgn0026015.1 7 112 +
Chr1	stalkie_big_nohaplotig	exon	91302331	91303078	100	+	.	Parent=FBgn0026015.1.mrna1;Target=FBgn0026015.1 113 860 +
Chr1	stalkie_big_nohaplotig	exon	91303146	91303346	100	+	.	Parent=FBgn0026015.1.mrna1;Target=FBgn0026015.1 861 1061 +
Chr1	stalkie_big_nohaplotig	exon	91303556	91304150	100	+	.	Parent=FBgn0026015.1.mrna1;Target=FBgn0026015.1 1062 1656 +
Chr1	stalkie_big_nohaplotig	exon	91304213	91304467	100	+	.	Parent=FBgn0026015.1.mrna1;Target=FBgn0026015.1 1657 1911 +
Chr1	stalkie_big_nohaplotig	exon	91304524	91304917	100	+	.	Parent=FBgn0026015.1.mrna1;Target=FBgn0026015.1 1912 2305 +
Chr1	stalkie_big_nohaplotig	exon	91304970	91305247	100	+	.	Parent=FBgn0026015.1.mrna1;Target=FBgn0026015.1 2306 2583 +
Chr1	stalkie_big_nohaplotig	CDS	91302162	91302267	.	+	0	Parent=FBgn0026015.1.mrna1;Target=FBgn0026015.1 7 112 +
Chr1	stalkie_big_nohaplotig	CDS	91302331	91303078	.	+	2	Parent=FBgn0026015.1.mrna1;Target=FBgn0026015.1 113 860 +
Chr1	stalkie_big_nohaplotig	CDS	91303146	91303346	.	+	1	Parent=FBgn0026015.1.mrna1;Target=FBgn0026015.1 861 1061 +
Chr1	stalkie_big_nohaplotig	CDS	91303556	91304150	.	+	1	Parent=FBgn0026015.1.mrna1;Target=FBgn0026015.1 1062 1656 +
Chr1	stalkie_big_nohaplotig	CDS	91304213	91304467	.	+	0	Parent=FBgn0026015.1.mrna1;Target=FBgn0026015.1 1657 1911 +
Chr1	stalkie_big_nohaplotig	CDS	91304524	91304917	.	+	0	Parent=FBgn0026015.1.mrna1;Target=FBgn0026015.1 1912 2305 +
Chr1	stalkie_big_nohaplotig	CDS	91304970	91305247	.	+	2	Parent=FBgn0026015.1.mrna1;Target=FBgn0026015.1 2306 2583 +
Chr1	gffcl	locus	91327697	91328058	.	-	.	ID=RLOC_00009516;geneIDs=comp117054_c0_seq1.path1;transcripts=comp117054_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91327697	91328058	.	-	.	ID=comp117054_c0_seq1.mrna1;geneID=comp117054_c0_seq1.path1;Name=comp117054_c0_seq1;Dir=indeterminatecoverage=94.8;identity=99.7;matches=361;mismatches=1;indels=0;unknowns=0;Target=comp117054_c0_seq1 382 21 .;CDS_Target=comp117054_c0_seq1 171 22 .;locus=RLOC_00009516
Chr1	stalkie_big_nohaplotig	exon	91327697	91328058	99	-	.	Parent=comp117054_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	91327908	91328057	.	-	0	Parent=comp117054_c0_seq1.mrna1
Chr1	gffcl	locus	91352274	91353554	.	+	.	ID=RLOC_00009517;geneIDs=comp116129_c0_seq1.path1;transcripts=comp116129_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91352274	91353554	.	+	.	ID=comp116129_c0_seq1.mrna1;geneID=comp116129_c0_seq1.path1;Name=comp116129_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1280;mismatches=1;indels=0;unknowns=0;Target=comp116129_c0_seq1 1281 1 .;CDS_Target=comp116129_c0_seq1 835 731 .;locus=RLOC_00009517
Chr1	stalkie_big_nohaplotig	exon	91352274	91353554	99	+	.	Parent=comp116129_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	91353004	91353108	.	+	0	Parent=comp116129_c0_seq1.mrna1
Chr1	gffcl	locus	91368137	91368746	.	+	.	ID=RLOC_00009518;geneIDs=comp133267_c0_seq1.path1;transcripts=comp133267_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91368137	91368746	.	+	.	ID=comp133267_c0_seq1.mrna1;geneID=comp133267_c0_seq1.path1;Name=comp133267_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=610;mismatches=0;indels=0;unknowns=0;Target=comp133267_c0_seq1 610 1 .;CDS_Target=comp133267_c0_seq1 142 2 .;locus=RLOC_00009518
Chr1	stalkie_big_nohaplotig	exon	91368137	91368746	100	+	.	Parent=comp133267_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	91368138	91368278	.	+	0	Parent=comp133267_c0_seq1.mrna1
Chr1	gffcl	locus	91378685	91378795	.	-	.	ID=RLOC_00009519;geneIDs=FBgn0004397.1.path1;transcripts=FBgn0004397.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91378685	91378795	.	-	.	ID=FBgn0004397.1.mrna1;geneID=FBgn0004397.1.path1;Name=FBgn0004397.1;Dir=indeterminatecoverage=3.8;identity=99.1;matches=110;mismatches=1;indels=0;unknowns=0;Target=FBgn0004397.1 111 1 .;locus=RLOC_00009519
Chr1	stalkie_big_nohaplotig	exon	91378685	91378795	99	-	.	Parent=FBgn0004397.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	91378685	91378795	.	-	0	Parent=FBgn0004397.1.mrna1
Chr1	gffcl	locus	91379004	91379654	.	-	.	ID=RLOC_00009520;geneIDs=comp158646_c0_seq1.path1;transcripts=comp158646_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91379004	91379654	.	-	.	ID=comp158646_c0_seq1.mrna1;geneID=comp158646_c0_seq1.path1;Name=comp158646_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=641;mismatches=10;indels=0;unknowns=0;Target=comp158646_c0_seq1 651 1 .;CDS_Target=comp158646_c0_seq1 277 167 .;locus=RLOC_00009520
Chr1	stalkie_big_nohaplotig	exon	91379004	91379654	98	-	.	Parent=comp158646_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	91379378	91379488	.	-	0	Parent=comp158646_c0_seq1.mrna1
Chr1	gffcl	locus	91382342	91383683	.	+	.	ID=RLOC_00009521;geneIDs=comp147125_c0_seq1.path1;transcripts=comp147125_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91382342	91383683	.	+	.	ID=comp147125_c0_seq1.mrna1;geneID=comp147125_c0_seq1.path1;Name=comp147125_c0_seq1;Dir=indeterminatecoverage=97.7;identity=99.9;matches=1340;mismatches=2;indels=0;unknowns=0;Target=comp147125_c0_seq1 1342 1 .;CDS_Target=comp147125_c0_seq1 1247 867 .;locus=RLOC_00009521
Chr1	stalkie_big_nohaplotig	exon	91382342	91383683	99	+	.	Parent=comp147125_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	91383208	91383588	.	+	0	Parent=comp147125_c0_seq1.mrna1
Chr1	gffcl	locus	91424202	91425481	.	-	.	ID=RLOC_00009522;geneIDs=comp116129_c0_seq1.path2;transcripts=comp116129_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	91424202	91425481	.	-	.	ID=comp116129_c0_seq1.mrna2;geneID=comp116129_c0_seq1.path2;Name=comp116129_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1277;mismatches=3;indels=1;unknowns=0;Target=comp116129_c0_seq1 1281 1 .;CDS_Target=comp116129_c0_seq1 835 731 .;locus=RLOC_00009522
Chr1	stalkie_big_nohaplotig	exon	91424202	91425481	99	-	.	Parent=comp116129_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	91424648	91424752	.	-	0	Parent=comp116129_c0_seq1.mrna2
Chr1	gffcl	locus	91425916	91429026	.	+	.	ID=RLOC_00009523;geneIDs=FBgn0004397.1.path2;transcripts=FBgn0004397.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	91425916	91429026	.	+	.	ID=FBgn0004397.1.mrna2;geneID=FBgn0004397.1.path2;Name=FBgn0004397.1;Dir=sensecoverage=96.2;identity=100.0;matches=2823;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009523
Chr1	stalkie_big_nohaplotig	exon	91425916	91427985	100	+	.	Parent=FBgn0004397.1.mrna2;Target=FBgn0004397.1 112 2181 +
Chr1	stalkie_big_nohaplotig	exon	91428044	91428164	100	+	.	Parent=FBgn0004397.1.mrna2;Target=FBgn0004397.1 2182 2302 +
Chr1	stalkie_big_nohaplotig	exon	91428279	91428409	100	+	.	Parent=FBgn0004397.1.mrna2;Target=FBgn0004397.1 2303 2433 +
Chr1	stalkie_big_nohaplotig	exon	91428473	91428871	100	+	.	Parent=FBgn0004397.1.mrna2;Target=FBgn0004397.1 2434 2832 +
Chr1	stalkie_big_nohaplotig	exon	91428925	91429026	100	+	.	Parent=FBgn0004397.1.mrna2;Target=FBgn0004397.1 2833 2934 +
Chr1	stalkie_big_nohaplotig	CDS	91425916	91427985	.	+	0	Parent=FBgn0004397.1.mrna2;Target=FBgn0004397.1 112 2181 +
Chr1	stalkie_big_nohaplotig	CDS	91428044	91428164	.	+	0	Parent=FBgn0004397.1.mrna2;Target=FBgn0004397.1 2182 2302 +
Chr1	stalkie_big_nohaplotig	CDS	91428279	91428409	.	+	2	Parent=FBgn0004397.1.mrna2;Target=FBgn0004397.1 2303 2433 +
Chr1	stalkie_big_nohaplotig	CDS	91428473	91428871	.	+	0	Parent=FBgn0004397.1.mrna2;Target=FBgn0004397.1 2434 2832 +
Chr1	stalkie_big_nohaplotig	CDS	91428925	91429026	.	+	0	Parent=FBgn0004397.1.mrna2;Target=FBgn0004397.1 2833 2934 +
Chr1	gffcl	locus	91500809	91503134	.	+	.	ID=RLOC_00009524;geneIDs=ORF1272.path1,comp156066_c0_seq1.path1;transcripts=comp156066_c0_seq1.mrna1,ORF1272.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91500809	91503134	.	+	.	ID=comp156066_c0_seq1.mrna1;geneID=comp156066_c0_seq1.path1;Name=comp156066_c0_seq1;Dir=sensecoverage=99.9;identity=99.9;matches=1996;mismatches=1;indels=1;unknowns=0;locus=RLOC_00009524
Chr1	stalkie_big_nohaplotig	exon	91500809	91500984	99	+	.	Parent=comp156066_c0_seq1.mrna1;Target=comp156066_c0_seq1 2 177 +
Chr1	stalkie_big_nohaplotig	exon	91501089	91501268	100	+	.	Parent=comp156066_c0_seq1.mrna1;Target=comp156066_c0_seq1 178 357 +
Chr1	stalkie_big_nohaplotig	exon	91501320	91501448	100	+	.	Parent=comp156066_c0_seq1.mrna1;Target=comp156066_c0_seq1 358 486 +
Chr1	stalkie_big_nohaplotig	exon	91501500	91502196	100	+	.	Parent=comp156066_c0_seq1.mrna1;Target=comp156066_c0_seq1 487 1183 +
Chr1	stalkie_big_nohaplotig	exon	91502257	91502544	100	+	.	Parent=comp156066_c0_seq1.mrna1;Target=comp156066_c0_seq1 1184 1471 +
Chr1	stalkie_big_nohaplotig	exon	91502608	91503134	99	+	.	Parent=comp156066_c0_seq1.mrna1;Target=comp156066_c0_seq1 1472 1999 +
Chr1	stalkie_big_nohaplotig	CDS	91502027	91502196	.	+	0	Parent=comp156066_c0_seq1.mrna1;Target=comp156066_c0_seq1 1014 1183 +
Chr1	stalkie_big_nohaplotig	CDS	91502257	91502544	.	+	1	Parent=comp156066_c0_seq1.mrna1;Target=comp156066_c0_seq1 1184 1471 +
Chr1	stalkie_big_nohaplotig	CDS	91502608	91502734	.	+	1	Parent=comp156066_c0_seq1.mrna1;Target=comp156066_c0_seq1 1472 1598 +
Chr1	stalkie_big_nohaplotig	mRNA	91501194	91502731	.	+	.	ID=ORF1272.mrna1;geneID=ORF1272.path1;Name=ORF1272;Dir=sensecoverage=100.0;identity=100.0;matches=1158;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009524
Chr1	stalkie_big_nohaplotig	exon	91501194	91501268	100	+	.	Parent=ORF1272.mrna1;Target=ORF1272 1 75 +
Chr1	stalkie_big_nohaplotig	exon	91501320	91501448	100	+	.	Parent=ORF1272.mrna1;Target=ORF1272 76 204 +
Chr1	stalkie_big_nohaplotig	exon	91501500	91501638	100	+	.	Parent=ORF1272.mrna1;Target=ORF1272 205 343 +
Chr1	stalkie_big_nohaplotig	exon	91501743	91501929	100	+	.	Parent=ORF1272.mrna1;Target=ORF1272 344 530 +
Chr1	stalkie_big_nohaplotig	exon	91501981	91502196	100	+	.	Parent=ORF1272.mrna1;Target=ORF1272 531 746 +
Chr1	stalkie_big_nohaplotig	exon	91502257	91502544	100	+	.	Parent=ORF1272.mrna1;Target=ORF1272 747 1034 +
Chr1	stalkie_big_nohaplotig	exon	91502608	91502731	100	+	.	Parent=ORF1272.mrna1;Target=ORF1272 1035 1158 +
Chr1	stalkie_big_nohaplotig	CDS	91501194	91501268	.	+	0	Parent=ORF1272.mrna1;Target=ORF1272 1 75 +
Chr1	stalkie_big_nohaplotig	CDS	91501320	91501448	.	+	0	Parent=ORF1272.mrna1;Target=ORF1272 76 204 +
Chr1	stalkie_big_nohaplotig	CDS	91501500	91501638	.	+	0	Parent=ORF1272.mrna1;Target=ORF1272 205 343 +
Chr1	stalkie_big_nohaplotig	CDS	91501743	91501929	.	+	2	Parent=ORF1272.mrna1;Target=ORF1272 344 530 +
Chr1	stalkie_big_nohaplotig	CDS	91501981	91502196	.	+	1	Parent=ORF1272.mrna1;Target=ORF1272 531 746 +
Chr1	stalkie_big_nohaplotig	CDS	91502257	91502544	.	+	1	Parent=ORF1272.mrna1;Target=ORF1272 747 1034 +
Chr1	stalkie_big_nohaplotig	CDS	91502608	91502731	.	+	1	Parent=ORF1272.mrna1;Target=ORF1272 1035 1158 +
Chr1	gffcl	locus	91503537	91514183	.	.	.	ID=RLOC_00009525;geneIDs=FBgn0040339.1.path1,comp159845_c0_seq1.path1;transcripts=FBgn0040339.1.mrna1,comp159845_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91503537	91514183	.	-	.	ID=FBgn0040339.1.mrna1;geneID=FBgn0040339.1.path1;Name=FBgn0040339.1;Dir=sensecoverage=100.0;identity=100.0;matches=438;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009525
Chr1	stalkie_big_nohaplotig	exon	91503537	91503751	100	-	.	Parent=FBgn0040339.1.mrna1;Target=FBgn0040339.1 224 438 +
Chr1	stalkie_big_nohaplotig	exon	91503814	91503915	100	-	.	Parent=FBgn0040339.1.mrna1;Target=FBgn0040339.1 122 223 +
Chr1	stalkie_big_nohaplotig	exon	91514063	91514183	100	-	.	Parent=FBgn0040339.1.mrna1;Target=FBgn0040339.1 1 121 +
Chr1	stalkie_big_nohaplotig	CDS	91503537	91503751	.	-	2	Parent=FBgn0040339.1.mrna1;Target=FBgn0040339.1 224 438 +
Chr1	stalkie_big_nohaplotig	CDS	91503814	91503915	.	-	2	Parent=FBgn0040339.1.mrna1;Target=FBgn0040339.1 122 223 +
Chr1	stalkie_big_nohaplotig	CDS	91514063	91514183	.	-	0	Parent=FBgn0040339.1.mrna1;Target=FBgn0040339.1 1 121 +
Chr1	stalkie_big_nohaplotig	mRNA	91511968	91514086	.	+	.	ID=comp159845_c0_seq1.mrna1;geneID=comp159845_c0_seq1.path1;Name=comp159845_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=2078;mismatches=32;indels=38;unknowns=0;Target=comp159845_c0_seq1 2139 1 .;CDS_Target=comp159845_c0_seq1 188 3 .;locus=RLOC_00009525
Chr1	stalkie_big_nohaplotig	exon	91511968	91514086	96	+	.	Parent=comp159845_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	91511970	91512155	.	+	0	Parent=comp159845_c0_seq1.mrna1
Chr1	gffcl	locus	91509794	91510773	.	-	.	ID=RLOC_00009526;geneIDs=comp144607_c0_seq1.path1;transcripts=comp144607_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91509794	91510773	.	-	.	ID=comp144607_c0_seq1.mrna1;geneID=comp144607_c0_seq1.path1;Name=comp144607_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=978;mismatches=2;indels=2;unknowns=0;Target=comp144607_c0_seq1 982 1 .;CDS_Target=comp144607_c0_seq1 139 2 .;locus=RLOC_00009526
Chr1	stalkie_big_nohaplotig	exon	91509794	91510773	99	-	.	Parent=comp144607_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	91510635	91510772	.	-	0	Parent=comp144607_c0_seq1.mrna1
Chr1	gffcl	locus	91531266	91532510	.	+	.	ID=RLOC_00009527;geneIDs=FBgn0031050.1.path1;transcripts=FBgn0031050.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91531266	91532510	.	+	.	ID=FBgn0031050.1.mrna1;geneID=FBgn0031050.1.path1;Name=FBgn0031050.1;Dir=sensecoverage=100.0;identity=100.0;matches=1134;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009527
Chr1	stalkie_big_nohaplotig	exon	91531266	91531345	100	+	.	Parent=FBgn0031050.1.mrna1;Target=FBgn0031050.1 1 80 +
Chr1	stalkie_big_nohaplotig	exon	91531402	91531554	100	+	.	Parent=FBgn0031050.1.mrna1;Target=FBgn0031050.1 81 233 +
Chr1	stalkie_big_nohaplotig	exon	91531610	91532510	100	+	.	Parent=FBgn0031050.1.mrna1;Target=FBgn0031050.1 234 1134 +
Chr1	stalkie_big_nohaplotig	CDS	91531266	91531345	.	+	0	Parent=FBgn0031050.1.mrna1;Target=FBgn0031050.1 1 80 +
Chr1	stalkie_big_nohaplotig	CDS	91531402	91531554	.	+	1	Parent=FBgn0031050.1.mrna1;Target=FBgn0031050.1 81 233 +
Chr1	stalkie_big_nohaplotig	CDS	91531610	91532510	.	+	1	Parent=FBgn0031050.1.mrna1;Target=FBgn0031050.1 234 1134 +
Chr1	gffcl	locus	91557785	91558495	.	+	.	ID=RLOC_00009528;geneIDs=Dp_FBgn0250603.path3;transcripts=Dp_FBgn0250603.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	91557785	91558495	.	+	.	ID=Dp_FBgn0250603.mrna3;geneID=Dp_FBgn0250603.path3;Name=Dp_FBgn0250603;Dir=indeterminatecoverage=100.0;identity=98.7;matches=702;mismatches=9;indels=0;unknowns=0;Target=Dp_FBgn0250603 711 1 .;locus=RLOC_00009528
Chr1	stalkie_big_nohaplotig	exon	91557785	91558495	98	+	.	Parent=Dp_FBgn0250603.mrna3
Chr1	stalkie_big_nohaplotig	CDS	91557785	91558495	.	+	0	Parent=Dp_FBgn0250603.mrna3
Chr1	gffcl	locus	91645741	91646426	.	-	.	ID=RLOC_00009529;geneIDs=comp147375_c0_seq1.path1;transcripts=comp147375_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91645741	91646426	.	-	.	ID=comp147375_c0_seq1.mrna1;geneID=comp147375_c0_seq1.path1;Name=comp147375_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=685;mismatches=1;indels=0;unknowns=0;Target=comp147375_c0_seq1 686 1 .;CDS_Target=comp147375_c0_seq1 409 341 .;locus=RLOC_00009529
Chr1	stalkie_big_nohaplotig	exon	91645741	91646426	99	-	.	Parent=comp147375_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	91646018	91646086	.	-	0	Parent=comp147375_c0_seq1.mrna1
Chr1	gffcl	locus	91647931	91649703	.	-	.	ID=RLOC_00009530;geneIDs=comp152744_c2_seq1.path1,comp158023_c0_seq1.path1;transcripts=comp158023_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91648463	91649703	.	-	.	ID=comp158023_c0_seq1.mrna1;geneID=comp158023_c0_seq1.path1;Name=comp158023_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1234;mismatches=6;indels=1;unknowns=0;Target=comp158023_c0_seq1 1240 1 .;CDS_Target=comp158023_c0_seq1 472 194 .;locus=RLOC_00009530
Chr1	stalkie_big_nohaplotig	exon	91648463	91649703	99	-	.	Parent=comp158023_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	91649232	91649510	.	-	0	Parent=comp158023_c0_seq1.mrna1
Chr1	gffcl	locus	91651660	91740262	.	-	.	ID=RLOC_00009531;geneIDs=FBgn0031064.1.path1;transcripts=FBgn0031064.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91651660	91740262	.	-	.	ID=FBgn0031064.1.mrna1;geneID=FBgn0031064.1.path1;Name=FBgn0031064.1;Dir=sensecoverage=97.8;identity=98.3;matches=1191;mismatches=11;indels=9;unknowns=0;locus=RLOC_00009531
Chr1	stalkie_big_nohaplotig	exon	91651660	91651791	98	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 2188 2319 +
Chr1	stalkie_big_nohaplotig	exon	91664063	91664072	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 2015 2024 +
Chr1	stalkie_big_nohaplotig	exon	91664799	91664803	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 2010 2014 +
Chr1	stalkie_big_nohaplotig	exon	91664822	91664829	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1946 1953 +
Chr1	stalkie_big_nohaplotig	exon	91665040	91665045	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1940 1945 +
Chr1	stalkie_big_nohaplotig	exon	91665243	91665248	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1934 1939 +
Chr1	stalkie_big_nohaplotig	exon	91666954	91666960	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1927 1933 +
Chr1	stalkie_big_nohaplotig	exon	91668016	91668027	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1909 1920 +
Chr1	stalkie_big_nohaplotig	exon	91668917	91668926	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1885 1894 +
Chr1	stalkie_big_nohaplotig	exon	91672270	91672278	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1806 1814 +
Chr1	stalkie_big_nohaplotig	exon	91672303	91672343	58	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1756 1787 +
Chr1	stalkie_big_nohaplotig	exon	91674415	91674424	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1618 1627 +
Chr1	stalkie_big_nohaplotig	exon	91674467	91674475	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1541 1549 +
Chr1	stalkie_big_nohaplotig	exon	91674881	91674888	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1513 1520 +
Chr1	stalkie_big_nohaplotig	exon	91682219	91682226	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1359 1366 +
Chr1	stalkie_big_nohaplotig	exon	91682234	91682241	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1330 1337 +
Chr1	stalkie_big_nohaplotig	exon	91687277	91687288	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1244 1255 +
Chr1	stalkie_big_nohaplotig	exon	91696981	91696984	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1240 1243 +
Chr1	stalkie_big_nohaplotig	exon	91697014	91697021	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1185 1192 +
Chr1	stalkie_big_nohaplotig	exon	91738856	91739027	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 772 943 +
Chr1	stalkie_big_nohaplotig	exon	91739243	91739451	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 563 771 +
Chr1	stalkie_big_nohaplotig	exon	91739548	91739646	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 464 562 +
Chr1	stalkie_big_nohaplotig	exon	91739708	91739839	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 332 463 +
Chr1	stalkie_big_nohaplotig	exon	91739921	91740074	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 178 331 +
Chr1	stalkie_big_nohaplotig	exon	91740137	91740262	100	-	.	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 52 177 +
Chr1	stalkie_big_nohaplotig	CDS	91651660	91651791	.	-	1	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 2188 2319 +
Chr1	stalkie_big_nohaplotig	CDS	91664063	91664072	.	-	2	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 2015 2024 +
Chr1	stalkie_big_nohaplotig	CDS	91664799	91664803	.	-	1	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 2010 2014 +
Chr1	stalkie_big_nohaplotig	CDS	91664822	91664829	.	-	0	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1946 1953 +
Chr1	stalkie_big_nohaplotig	CDS	91665040	91665045	.	-	0	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1940 1945 +
Chr1	stalkie_big_nohaplotig	CDS	91665243	91665248	.	-	0	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1934 1939 +
Chr1	stalkie_big_nohaplotig	CDS	91666954	91666960	.	-	1	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1927 1933 +
Chr1	stalkie_big_nohaplotig	CDS	91668016	91668027	.	-	1	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1909 1920 +
Chr1	stalkie_big_nohaplotig	CDS	91668917	91668926	.	-	2	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1885 1894 +
Chr1	stalkie_big_nohaplotig	CDS	91672270	91672278	.	-	2	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1806 1814 +
Chr1	stalkie_big_nohaplotig	CDS	91672303	91672343	.	-	1	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1756 1787 +
Chr1	stalkie_big_nohaplotig	CDS	91674415	91674424	.	-	2	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1618 1627 +
Chr1	stalkie_big_nohaplotig	CDS	91674467	91674475	.	-	2	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1541 1549 +
Chr1	stalkie_big_nohaplotig	CDS	91674881	91674888	.	-	1	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1513 1520 +
Chr1	stalkie_big_nohaplotig	CDS	91682219	91682226	.	-	0	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1359 1366 +
Chr1	stalkie_big_nohaplotig	CDS	91682234	91682241	.	-	2	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1330 1337 +
Chr1	stalkie_big_nohaplotig	CDS	91687277	91687288	.	-	2	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1244 1255 +
Chr1	stalkie_big_nohaplotig	CDS	91696981	91696984	.	-	0	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1240 1243 +
Chr1	stalkie_big_nohaplotig	CDS	91697014	91697021	.	-	2	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 1185 1192 +
Chr1	stalkie_big_nohaplotig	CDS	91738856	91739027	.	-	0	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 772 943 +
Chr1	stalkie_big_nohaplotig	CDS	91739243	91739451	.	-	2	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 563 771 +
Chr1	stalkie_big_nohaplotig	CDS	91739548	91739646	.	-	2	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 464 562 +
Chr1	stalkie_big_nohaplotig	CDS	91739708	91739839	.	-	2	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 332 463 +
Chr1	stalkie_big_nohaplotig	CDS	91739921	91740074	.	-	0	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 178 331 +
Chr1	stalkie_big_nohaplotig	CDS	91740137	91740262	.	-	0	Parent=FBgn0031064.1.mrna1;Target=FBgn0031064.1 52 177 +
Chr1	gffcl	locus	91819307	91820017	.	-	.	ID=RLOC_00009535;geneIDs=Dp_FBgn0250603.path7;transcripts=Dp_FBgn0250603.mrna7
Chr1	stalkie_big_nohaplotig	mRNA	91819307	91820017	.	-	.	ID=Dp_FBgn0250603.mrna7;geneID=Dp_FBgn0250603.path7;Name=Dp_FBgn0250603;Dir=indeterminatecoverage=100.0;identity=98.5;matches=700;mismatches=11;indels=0;unknowns=0;Target=Dp_FBgn0250603 711 1 .;locus=RLOC_00009535
Chr1	stalkie_big_nohaplotig	exon	91819307	91820017	98	-	.	Parent=Dp_FBgn0250603.mrna7
Chr1	stalkie_big_nohaplotig	CDS	91819307	91820017	.	-	0	Parent=Dp_FBgn0250603.mrna7
Chr1	gffcl	locus	91838215	91838562	.	+	.	ID=RLOC_00009536;geneIDs=comp152429_c1_seq1.path5;transcripts=comp152429_c1_seq1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	91838215	91838562	.	+	.	ID=comp152429_c1_seq1.mrna5;geneID=comp152429_c1_seq1.path5;Name=comp152429_c1_seq1;Dir=indeterminatecoverage=100.0;identity=92.5;matches=322;mismatches=26;indels=0;unknowns=0;Target=comp152429_c1_seq1 348 1 .;CDS_Target=comp152429_c1_seq1 34 2 .;locus=RLOC_00009536
Chr1	stalkie_big_nohaplotig	exon	91838215	91838562	92	+	.	Parent=comp152429_c1_seq1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	91838216	91838248	.	+	0	Parent=comp152429_c1_seq1.mrna5
Chr1	gffcl	locus	91842231	91842592	.	+	.	ID=RLOC_00009537;geneIDs=comp151573_c1_seq1.path4;transcripts=comp151573_c1_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	91842231	91842592	.	+	.	ID=comp151573_c1_seq1.mrna4;geneID=comp151573_c1_seq1.path4;Name=comp151573_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=359;mismatches=3;indels=0;unknowns=0;Target=comp151573_c1_seq1 362 1 .;CDS_Target=comp151573_c1_seq1 120 1 .;locus=RLOC_00009537
Chr1	stalkie_big_nohaplotig	exon	91842231	91842592	99	+	.	Parent=comp151573_c1_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	91842231	91842350	.	+	0	Parent=comp151573_c1_seq1.mrna4
Chr1	gffcl	locus	91942345	91946414	.	-	.	ID=RLOC_00009538;geneIDs=FBgn0031062.1.path1;transcripts=FBgn0031062.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91942345	91946414	.	-	.	ID=FBgn0031062.1.mrna1;geneID=FBgn0031062.1.path1;Name=FBgn0031062.1;Dir=sensecoverage=100.0;identity=99.9;matches=1633;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009538
Chr1	stalkie_big_nohaplotig	exon	91942345	91942487	100	-	.	Parent=FBgn0031062.1.mrna1;Target=FBgn0031062.1 1493 1635 +
Chr1	stalkie_big_nohaplotig	exon	91942542	91943376	99	-	.	Parent=FBgn0031062.1.mrna1;Target=FBgn0031062.1 658 1492 +
Chr1	stalkie_big_nohaplotig	exon	91945641	91945823	99	-	.	Parent=FBgn0031062.1.mrna1;Target=FBgn0031062.1 475 657 +
Chr1	stalkie_big_nohaplotig	exon	91945888	91946165	100	-	.	Parent=FBgn0031062.1.mrna1;Target=FBgn0031062.1 197 474 +
Chr1	stalkie_big_nohaplotig	exon	91946219	91946414	100	-	.	Parent=FBgn0031062.1.mrna1;Target=FBgn0031062.1 1 196 +
Chr1	stalkie_big_nohaplotig	CDS	91942345	91942487	.	-	2	Parent=FBgn0031062.1.mrna1;Target=FBgn0031062.1 1493 1635 +
Chr1	stalkie_big_nohaplotig	CDS	91942542	91943376	.	-	0	Parent=FBgn0031062.1.mrna1;Target=FBgn0031062.1 658 1492 +
Chr1	stalkie_big_nohaplotig	CDS	91945641	91945823	.	-	0	Parent=FBgn0031062.1.mrna1;Target=FBgn0031062.1 475 657 +
Chr1	stalkie_big_nohaplotig	CDS	91945888	91946165	.	-	2	Parent=FBgn0031062.1.mrna1;Target=FBgn0031062.1 197 474 +
Chr1	stalkie_big_nohaplotig	CDS	91946219	91946414	.	-	0	Parent=FBgn0031062.1.mrna1;Target=FBgn0031062.1 1 196 +
Chr1	gffcl	locus	91943468	91944945	.	+	.	ID=RLOC_00009539;geneIDs=comp158710_c1_seq1.path1;transcripts=comp158710_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91943468	91944945	.	+	.	ID=comp158710_c1_seq1.mrna1;geneID=comp158710_c1_seq1.path1;Name=comp158710_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1476;mismatches=2;indels=0;unknowns=0;Target=comp158710_c1_seq1 1478 1 .;CDS_Target=comp158710_c1_seq1 927 778 .;locus=RLOC_00009539
Chr1	stalkie_big_nohaplotig	exon	91943468	91944945	99	+	.	Parent=comp158710_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	91944245	91944394	.	+	0	Parent=comp158710_c1_seq1.mrna1
Chr1	gffcl	locus	91983489	91983890	.	-	.	ID=RLOC_00009540;geneIDs=comp144621_c0_seq1.path1;transcripts=comp144621_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91983489	91983890	.	-	.	ID=comp144621_c0_seq1.mrna1;geneID=comp144621_c0_seq1.path1;Name=comp144621_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=401;mismatches=0;indels=1;unknowns=0;Target=comp144621_c0_seq1 401 1 .;CDS_Target=comp144621_c0_seq1 395 261 .;locus=RLOC_00009540
Chr1	stalkie_big_nohaplotig	exon	91983489	91983890	99	-	.	Parent=comp144621_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	91983495	91983630	.	-	0	Parent=comp144621_c0_seq1.mrna1
Chr1	gffcl	locus	91995489	92085324	.	-	.	ID=RLOC_00009541;geneIDs=FBgn0027930.1.path1;transcripts=FBgn0027930.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91995489	92085324	.	-	.	ID=FBgn0027930.1.mrna1;geneID=FBgn0027930.1.path1;Name=FBgn0027930.1;Dir=indeterminatecoverage=80.8;identity=91.1;matches=794;mismatches=48;indels=30;unknowns=0;Target=FBgn0027930.1 1143 841 .;locus=RLOC_00009541
Chr1	stalkie_big_nohaplotig	exon	91995489	91996155	99	-	.	Parent=FBgn0027930.1.mrna1;Target=FBgn0027930.1 1143 476 .
Chr1	stalkie_big_nohaplotig	exon	92009727	92009729	100	-	.	Parent=FBgn0027930.1.mrna1;Target=FBgn0027930.1 475 473 .
Chr1	stalkie_big_nohaplotig	exon	92028136	92028137	100	-	.	Parent=FBgn0027930.1.mrna1;Target=FBgn0027930.1 472 471 .
Chr1	stalkie_big_nohaplotig	exon	92030405	92030414	100	-	.	Parent=FBgn0027930.1.mrna1;Target=FBgn0027930.1 470 461 .
Chr1	stalkie_big_nohaplotig	exon	92038842	92038954	44	-	.	Parent=FBgn0027930.1.mrna1;Target=FBgn0027930.1 460 331 .
Chr1	stalkie_big_nohaplotig	exon	92045832	92045839	100	-	.	Parent=FBgn0027930.1.mrna1;Target=FBgn0027930.1 330 323 .
Chr1	stalkie_big_nohaplotig	exon	92049954	92049958	100	-	.	Parent=FBgn0027930.1.mrna1;Target=FBgn0027930.1 322 318 .
Chr1	stalkie_big_nohaplotig	exon	92052649	92052652	100	-	.	Parent=FBgn0027930.1.mrna1;Target=FBgn0027930.1 317 314 .
Chr1	stalkie_big_nohaplotig	exon	92075854	92075864	100	-	.	Parent=FBgn0027930.1.mrna1;Target=FBgn0027930.1 256 246 .
Chr1	stalkie_big_nohaplotig	exon	92079061	92079066	100	-	.	Parent=FBgn0027930.1.mrna1;Target=FBgn0027930.1 245 240 .
Chr1	stalkie_big_nohaplotig	exon	92079473	92079474	100	-	.	Parent=FBgn0027930.1.mrna1;Target=FBgn0027930.1 239 238 .
Chr1	stalkie_big_nohaplotig	exon	92083116	92083126	81	-	.	Parent=FBgn0027930.1.mrna1;Target=FBgn0027930.1 237 227 .
Chr1	stalkie_big_nohaplotig	exon	92085319	92085324	100	-	.	Parent=FBgn0027930.1.mrna1;Target=FBgn0027930.1 226 221 .
Chr1	stalkie_big_nohaplotig	CDS	91995489	91995790	.	-	0	Parent=FBgn0027930.1.mrna1
Chr1	gffcl	locus	91996515	91997742	.	-	.	ID=RLOC_00009542;geneIDs=comp159114_c1_seq1.path1;transcripts=comp159114_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	91996515	91997742	.	-	.	ID=comp159114_c1_seq1.mrna1;geneID=comp159114_c1_seq1.path1;Name=comp159114_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1227;mismatches=1;indels=0;unknowns=0;Target=comp159114_c1_seq1 1228 1 .;CDS_Target=comp159114_c1_seq1 438 232 .;locus=RLOC_00009542
Chr1	stalkie_big_nohaplotig	exon	91996515	91997742	99	-	.	Parent=comp159114_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	91997305	91997511	.	-	0	Parent=comp159114_c1_seq1.mrna1
Chr1	gffcl	locus	92199402	92255213	.	-	.	ID=RLOC_00009543;geneIDs=FBgn0003714.1.path1;transcripts=FBgn0003714.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	92199402	92255213	.	-	.	ID=FBgn0003714.1.mrna1;geneID=FBgn0003714.1.path1;Name=FBgn0003714.1;Dir=sensecoverage=100.0;identity=100.0;matches=420;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009543
Chr1	stalkie_big_nohaplotig	exon	92199402	92199760	100	-	.	Parent=FBgn0003714.1.mrna1;Target=FBgn0003714.1 62 420 +
Chr1	stalkie_big_nohaplotig	exon	92255153	92255213	100	-	.	Parent=FBgn0003714.1.mrna1;Target=FBgn0003714.1 1 61 +
Chr1	stalkie_big_nohaplotig	CDS	92199402	92199760	.	-	2	Parent=FBgn0003714.1.mrna1;Target=FBgn0003714.1 62 420 +
Chr1	stalkie_big_nohaplotig	CDS	92255153	92255213	.	-	0	Parent=FBgn0003714.1.mrna1;Target=FBgn0003714.1 1 61 +
Chr1	gffcl	locus	92201611	92202112	.	+	.	ID=RLOC_00009544;geneIDs=comp157805_c0_seq1.path1;transcripts=comp157805_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	92201611	92202112	.	+	.	ID=comp157805_c0_seq1.mrna1;geneID=comp157805_c0_seq1.path1;Name=comp157805_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=502;mismatches=0;indels=0;unknowns=0;Target=comp157805_c0_seq1 502 1 .;CDS_Target=comp157805_c0_seq1 91 2 .;locus=RLOC_00009544
Chr1	stalkie_big_nohaplotig	exon	92201611	92202112	100	+	.	Parent=comp157805_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	92201612	92201701	.	+	0	Parent=comp157805_c0_seq1.mrna1
Chr1	gffcl	locus	92251113	92251622	.	-	.	ID=RLOC_00009545;geneIDs=comp152643_c2_seq1.path1;transcripts=comp152643_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	92251113	92251622	.	-	.	ID=comp152643_c2_seq1.mrna1;geneID=comp152643_c2_seq1.path1;Name=comp152643_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=505;mismatches=5;indels=0;unknowns=0;Target=comp152643_c2_seq1 510 1 .;CDS_Target=comp152643_c2_seq1 191 3 .;locus=RLOC_00009545
Chr1	stalkie_big_nohaplotig	exon	92251113	92251622	99	-	.	Parent=comp152643_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	92251432	92251620	.	-	0	Parent=comp152643_c2_seq1.mrna1
Chr1	gffcl	locus	92327771	92328204	.	-	.	ID=RLOC_00009546;geneIDs=FBgn0025839.1.path1;transcripts=FBgn0025839.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	92327771	92328204	.	-	.	ID=FBgn0025839.1.mrna1;geneID=FBgn0025839.1.path1;Name=FBgn0025839.1;Dir=sensecoverage=100.0;identity=100.0;matches=357;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009546
Chr1	stalkie_big_nohaplotig	exon	92327771	92328004	100	-	.	Parent=FBgn0025839.1.mrna1;Target=FBgn0025839.1 124 357 +
Chr1	stalkie_big_nohaplotig	exon	92328082	92328204	100	-	.	Parent=FBgn0025839.1.mrna1;Target=FBgn0025839.1 1 123 +
Chr1	stalkie_big_nohaplotig	CDS	92327771	92328004	.	-	0	Parent=FBgn0025839.1.mrna1;Target=FBgn0025839.1 124 357 +
Chr1	stalkie_big_nohaplotig	CDS	92328082	92328204	.	-	0	Parent=FBgn0025839.1.mrna1;Target=FBgn0025839.1 1 123 +
Chr1	gffcl	locus	92491265	92493209	.	-	.	ID=RLOC_00009548;geneIDs=comp163812_c0_seq1.path3;transcripts=comp163812_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	92491265	92493209	.	-	.	ID=comp163812_c0_seq1.mrna3;geneID=comp163812_c0_seq1.path3;Name=comp163812_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=1907;mismatches=38;indels=0;unknowns=0;Target=comp163812_c0_seq1 1945 1 .;CDS_Target=comp163812_c0_seq1 1945 2 .;locus=RLOC_00009548
Chr1	stalkie_big_nohaplotig	exon	92491265	92493209	98	-	.	Parent=comp163812_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	92491265	92493208	.	-	0	Parent=comp163812_c0_seq1.mrna3
Chr1	gffcl	locus	92579964	92580559	.	+	.	ID=RLOC_00009551;geneIDs=comp116852_c0_seq1.path1;transcripts=comp116852_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	92579964	92580559	.	+	.	ID=comp116852_c0_seq1.mrna1;geneID=comp116852_c0_seq1.path1;Name=comp116852_c0_seq1;Dir=indeterminatecoverage=97.7;identity=100.0;matches=596;mismatches=0;indels=0;unknowns=0;Target=comp116852_c0_seq1 610 15 .;CDS_Target=comp116852_c0_seq1 609 544 .;locus=RLOC_00009551
Chr1	stalkie_big_nohaplotig	exon	92579964	92580559	100	+	.	Parent=comp116852_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	92580493	92580558	.	+	0	Parent=comp116852_c0_seq1.mrna1
Chr1	gffcl	locus	92581001	92594752	.	-	.	ID=RLOC_00009552;geneIDs=FBgn0023540.1.path1;transcripts=FBgn0023540.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	92581001	92594752	.	-	.	ID=FBgn0023540.1.mrna1;geneID=FBgn0023540.1.path1;Name=FBgn0023540.1;Dir=sensecoverage=100.0;identity=100.0;matches=1062;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009552
Chr1	stalkie_big_nohaplotig	exon	92581001	92581714	100	-	.	Parent=FBgn0023540.1.mrna1;Target=FBgn0023540.1 349 1062 +
Chr1	stalkie_big_nohaplotig	exon	92581769	92581925	100	-	.	Parent=FBgn0023540.1.mrna1;Target=FBgn0023540.1 192 348 +
Chr1	stalkie_big_nohaplotig	exon	92582004	92582143	100	-	.	Parent=FBgn0023540.1.mrna1;Target=FBgn0023540.1 52 191 +
Chr1	stalkie_big_nohaplotig	exon	92594702	92594752	100	-	.	Parent=FBgn0023540.1.mrna1;Target=FBgn0023540.1 1 51 +
Chr1	stalkie_big_nohaplotig	CDS	92581001	92581714	.	-	0	Parent=FBgn0023540.1.mrna1;Target=FBgn0023540.1 349 1062 +
Chr1	stalkie_big_nohaplotig	CDS	92581769	92581925	.	-	1	Parent=FBgn0023540.1.mrna1;Target=FBgn0023540.1 192 348 +
Chr1	stalkie_big_nohaplotig	CDS	92582004	92582143	.	-	0	Parent=FBgn0023540.1.mrna1;Target=FBgn0023540.1 52 191 +
Chr1	stalkie_big_nohaplotig	CDS	92594702	92594752	.	-	0	Parent=FBgn0023540.1.mrna1;Target=FBgn0023540.1 1 51 +
Chr1	gffcl	locus	92582877	92583086	.	-	.	ID=RLOC_00009553;geneIDs=comp116973_c0_seq1.path1;transcripts=comp116973_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	92582877	92583086	.	-	.	ID=comp116973_c0_seq1.mrna1;geneID=comp116973_c0_seq1.path1;Name=comp116973_c0_seq1;Dir=indeterminatecoverage=86.4;identity=99.5;matches=209;mismatches=1;indels=0;unknowns=0;Target=comp116973_c0_seq1 243 34 .;CDS_Target=comp116973_c0_seq1 232 35 .;locus=RLOC_00009553
Chr1	stalkie_big_nohaplotig	exon	92582877	92583086	99	-	.	Parent=comp116973_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	92582888	92583085	.	-	0	Parent=comp116973_c0_seq1.mrna1
Chr1	gffcl	locus	92591908	92592191	.	-	.	ID=RLOC_00009554;geneIDs=comp757731_c0_seq1.path1;transcripts=comp757731_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	92591908	92592191	.	-	.	ID=comp757731_c0_seq1.mrna1;geneID=comp757731_c0_seq1.path1;Name=comp757731_c0_seq1;Dir=indeterminatecoverage=97.9;identity=100.0;matches=284;mismatches=0;indels=0;unknowns=0;Target=comp757731_c0_seq1 284 1 .;CDS_Target=comp757731_c0_seq1 262 86 .;locus=RLOC_00009554
Chr1	stalkie_big_nohaplotig	exon	92591908	92592191	100	-	.	Parent=comp757731_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	92591930	92592106	.	-	0	Parent=comp757731_c0_seq1.mrna1
Chr1	gffcl	locus	92642510	92642902	.	-	.	ID=RLOC_00009556;geneIDs=Dv_FBgn0206941.5.path1;transcripts=Dv_FBgn0206941.5.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	92642510	92642902	.	-	.	ID=Dv_FBgn0206941.5.mrna1;geneID=Dv_FBgn0206941.5.path1;Name=Dv_FBgn0206941.5;Dir=indeterminatecoverage=100.0;identity=93.4;matches=367;mismatches=26;indels=0;unknowns=0;Target=Dv_FBgn0206941.5 393 1 .;locus=RLOC_00009556
Chr1	stalkie_big_nohaplotig	exon	92642510	92642902	93	-	.	Parent=Dv_FBgn0206941.5.mrna1
Chr1	stalkie_big_nohaplotig	CDS	92642510	92642902	.	-	0	Parent=Dv_FBgn0206941.5.mrna1
Chr1	gffcl	locus	92711383	92711622	.	-	.	ID=RLOC_00009557;geneIDs=comp135118_c1_seq1.path3;transcripts=comp135118_c1_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	92711383	92711622	.	-	.	ID=comp135118_c1_seq1.mrna3;geneID=comp135118_c1_seq1.path3;Name=comp135118_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=240;mismatches=0;indels=0;unknowns=0;Target=comp135118_c1_seq1 240 1 .;CDS_Target=comp135118_c1_seq1 218 90 .;locus=RLOC_00009557
Chr1	stalkie_big_nohaplotig	exon	92711383	92711622	100	-	.	Parent=comp135118_c1_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	92711405	92711533	.	-	0	Parent=comp135118_c1_seq1.mrna3
Chr1	gffcl	locus	92711977	92712357	.	+	.	ID=RLOC_00009558;geneIDs=comp703570_c0_seq1.path3;transcripts=comp703570_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	92711977	92712357	.	+	.	ID=comp703570_c0_seq1.mrna3;geneID=comp703570_c0_seq1.path3;Name=comp703570_c0_seq1;Dir=indeterminatecoverage=94.8;identity=99.5;matches=379;mismatches=2;indels=0;unknowns=0;Target=comp703570_c0_seq1 402 22 .;CDS_Target=comp703570_c0_seq1 52 29 .;locus=RLOC_00009558
Chr1	stalkie_big_nohaplotig	exon	92711977	92712357	99	+	.	Parent=comp703570_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	92711984	92712007	.	+	0	Parent=comp703570_c0_seq1.mrna3
Chr1	gffcl	locus	92716636	92717619	.	+	.	ID=RLOC_00009559;geneIDs=FBgn0023517.2.path1;transcripts=FBgn0023517.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	92716636	92717619	.	+	.	ID=FBgn0023517.2.mrna1;geneID=FBgn0023517.2.path1;Name=FBgn0023517.2;Dir=sensecoverage=100.0;identity=100.0;matches=921;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009559
Chr1	stalkie_big_nohaplotig	exon	92716636	92717250	100	+	.	Parent=FBgn0023517.2.mrna1;Target=FBgn0023517.2 1 615 +
Chr1	stalkie_big_nohaplotig	exon	92717314	92717619	100	+	.	Parent=FBgn0023517.2.mrna1;Target=FBgn0023517.2 616 921 +
Chr1	stalkie_big_nohaplotig	CDS	92716636	92717250	.	+	0	Parent=FBgn0023517.2.mrna1;Target=FBgn0023517.2 1 615 +
Chr1	stalkie_big_nohaplotig	CDS	92717314	92717619	.	+	0	Parent=FBgn0023517.2.mrna1;Target=FBgn0023517.2 616 921 +
Chr1	gffcl	locus	92717660	92719315	.	+	.	ID=RLOC_00009560;geneIDs=comp148154_c0_seq1.path1;transcripts=comp148154_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	92717660	92719315	.	+	.	ID=comp148154_c0_seq1.mrna1;geneID=comp148154_c0_seq1.path1;Name=comp148154_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=1367;mismatches=4;indels=1;unknowns=0;Target=comp148154_c0_seq1 240 488 +;locus=RLOC_00009560
Chr1	stalkie_big_nohaplotig	exon	92717660	92717682	100	+	.	Parent=comp148154_c0_seq1.mrna1;Target=comp148154_c0_seq1 1 23 +
Chr1	stalkie_big_nohaplotig	exon	92717968	92719315	99	+	.	Parent=comp148154_c0_seq1.mrna1;Target=comp148154_c0_seq1 24 1372 +
Chr1	stalkie_big_nohaplotig	CDS	92718184	92718432	.	+	0	Parent=comp148154_c0_seq1.mrna1
Chr1	gffcl	locus	92722509	92847332	.	-	.	ID=RLOC_00009561;geneIDs=comp135595_c0_seq1.path1;transcripts=comp135595_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	92722509	92847332	.	-	.	ID=comp135595_c0_seq1.mrna1;geneID=comp135595_c0_seq1.path1;Name=comp135595_c0_seq1;Dir=indeterminatecoverage=96.2;identity=98.1;matches=421;mismatches=7;indels=1;unknowns=0;Target=comp135595_c0_seq1 316 20 .;locus=RLOC_00009561
Chr1	stalkie_big_nohaplotig	exon	92722509	92722534	96	-	.	Parent=comp135595_c0_seq1.mrna1;Target=comp135595_c0_seq1 496 471 .
Chr1	stalkie_big_nohaplotig	exon	92727462	92727468	100	-	.	Parent=comp135595_c0_seq1.mrna1;Target=comp135595_c0_seq1 470 464 .
Chr1	stalkie_big_nohaplotig	exon	92738933	92738935	100	-	.	Parent=comp135595_c0_seq1.mrna1;Target=comp135595_c0_seq1 463 461 .
Chr1	stalkie_big_nohaplotig	exon	92750518	92750524	100	-	.	Parent=comp135595_c0_seq1.mrna1;Target=comp135595_c0_seq1 460 454 .
Chr1	stalkie_big_nohaplotig	exon	92758208	92758216	100	-	.	Parent=comp135595_c0_seq1.mrna1;Target=comp135595_c0_seq1 450 442 .
Chr1	stalkie_big_nohaplotig	exon	92763812	92763815	100	-	.	Parent=comp135595_c0_seq1.mrna1;Target=comp135595_c0_seq1 441 438 .
Chr1	stalkie_big_nohaplotig	exon	92766582	92766588	100	-	.	Parent=comp135595_c0_seq1.mrna1;Target=comp135595_c0_seq1 437 431 .
Chr1	stalkie_big_nohaplotig	exon	92766593	92766602	100	-	.	Parent=comp135595_c0_seq1.mrna1;Target=comp135595_c0_seq1 391 382 .
Chr1	stalkie_big_nohaplotig	exon	92769176	92769178	100	-	.	Parent=comp135595_c0_seq1.mrna1;Target=comp135595_c0_seq1 381 379 .
Chr1	stalkie_big_nohaplotig	exon	92775237	92775247	100	-	.	Parent=comp135595_c0_seq1.mrna1;Target=comp135595_c0_seq1 376 366 .
Chr1	stalkie_big_nohaplotig	exon	92802051	92802055	100	-	.	Parent=comp135595_c0_seq1.mrna1;Target=comp135595_c0_seq1 365 361 .
Chr1	stalkie_big_nohaplotig	exon	92803489	92803498	100	-	.	Parent=comp135595_c0_seq1.mrna1;Target=comp135595_c0_seq1 360 351 .
Chr1	stalkie_big_nohaplotig	exon	92803612	92803614	100	-	.	Parent=comp135595_c0_seq1.mrna1;Target=comp135595_c0_seq1 350 348 .
Chr1	stalkie_big_nohaplotig	exon	92810077	92810079	100	-	.	Parent=comp135595_c0_seq1.mrna1;Target=comp135595_c0_seq1 347 345 .
Chr1	stalkie_big_nohaplotig	exon	92827537	92827542	100	-	.	Parent=comp135595_c0_seq1.mrna1;Target=comp135595_c0_seq1 344 339 .
Chr1	stalkie_big_nohaplotig	exon	92829328	92829330	100	-	.	Parent=comp135595_c0_seq1.mrna1;Target=comp135595_c0_seq1 338 336 .
Chr1	stalkie_big_nohaplotig	exon	92834774	92834782	100	-	.	Parent=comp135595_c0_seq1.mrna1;Target=comp135595_c0_seq1 331 323 .
Chr1	stalkie_big_nohaplotig	exon	92847031	92847332	97	-	.	Parent=comp135595_c0_seq1.mrna1;Target=comp135595_c0_seq1 322 20 .
Chr1	stalkie_big_nohaplotig	CDS	92847037	92847332	.	-	0	Parent=comp135595_c0_seq1.mrna1
Chr1	gffcl	locus	92731265	92732264	.	-	.	ID=RLOC_00009562;geneIDs=comp138185_c0_seq1.path1;transcripts=comp138185_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	92731265	92732264	.	-	.	ID=comp138185_c0_seq1.mrna1;geneID=comp138185_c0_seq1.path1;Name=comp138185_c0_seq1;Dir=sensecoverage=98.5;identity=95.3;matches=837;mismatches=38;indels=3;unknowns=0;locus=RLOC_00009562
Chr1	stalkie_big_nohaplotig	exon	92731265	92731985	94	-	.	Parent=comp138185_c0_seq1.mrna1;Target=comp138185_c0_seq1 155 878 +
Chr1	stalkie_big_nohaplotig	exon	92732036	92732115	100	-	.	Parent=comp138185_c0_seq1.mrna1;Target=comp138185_c0_seq1 75 154 +
Chr1	stalkie_big_nohaplotig	exon	92732191	92732264	100	-	.	Parent=comp138185_c0_seq1.mrna1;Target=comp138185_c0_seq1 1 74 +
Chr1	stalkie_big_nohaplotig	CDS	92732053	92732115	.	-	0	Parent=comp138185_c0_seq1.mrna1;Target=comp138185_c0_seq1 75 137 +
Chr1	stalkie_big_nohaplotig	CDS	92732191	92732262	.	-	0	Parent=comp138185_c0_seq1.mrna1;Target=comp138185_c0_seq1 3 74 +
Chr1	gffcl	locus	92845913	92846381	.	+	.	ID=RLOC_00009564;geneIDs=comp150306_c0_seq1.path1;transcripts=comp150306_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	92845913	92846381	.	+	.	ID=comp150306_c0_seq1.mrna1;geneID=comp150306_c0_seq1.path1;Name=comp150306_c0_seq1;Dir=indeterminatecoverage=74.9;identity=88.4;matches=418;mismatches=16;indels=39;unknowns=0;Target=comp150306_c0_seq1 585 148 .;CDS_Target=comp150306_c0_seq1 189 148 .;locus=RLOC_00009564
Chr1	stalkie_big_nohaplotig	exon	92845913	92846381	88	+	.	Parent=comp150306_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	92845913	92845954	.	+	0	Parent=comp150306_c0_seq1.mrna1
Chr1	gffcl	locus	92854234	92854588	.	+	.	ID=RLOC_00009565;geneIDs=comp154919_c1_seq1.path2;transcripts=comp154919_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	92854234	92854588	.	+	.	ID=comp154919_c1_seq1.mrna2;geneID=comp154919_c1_seq1.path2;Name=comp154919_c1_seq1;Dir=indeterminatecoverage=100.0;identity=93.0;matches=330;mismatches=22;indels=3;unknowns=0;Target=comp154919_c1_seq1 352 1 .;CDS_Target=comp154919_c1_seq1 265 95 .;locus=RLOC_00009565
Chr1	stalkie_big_nohaplotig	exon	92854234	92854588	92	+	.	Parent=comp154919_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	92854328	92854501	.	+	0	Parent=comp154919_c1_seq1.mrna2
Chr1	gffcl	locus	92969892	92971165	.	+	.	ID=RLOC_00009567;geneIDs=FBgn0035401.1.path1;transcripts=FBgn0035401.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	92969892	92971165	.	+	.	ID=FBgn0035401.1.mrna1;geneID=FBgn0035401.1.path1;Name=FBgn0035401.1;Dir=indeterminatecoverage=99.5;identity=100.0;matches=1274;mismatches=0;indels=0;unknowns=0;Target=FBgn0035401.1 1281 8 .;CDS_Target=FBgn0035401.1 1281 10 .;locus=RLOC_00009567
Chr1	stalkie_big_nohaplotig	exon	92969892	92971165	100	+	.	Parent=FBgn0035401.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	92969894	92971165	.	+	0	Parent=FBgn0035401.1.mrna1
Chr1	gffcl	locus	92972164	92974043	.	-	.	ID=RLOC_00009568;geneIDs=FBgn0035402.1.path1;transcripts=FBgn0035402.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	92972164	92974043	.	-	.	ID=FBgn0035402.1.mrna1;geneID=FBgn0035402.1.path1;Name=FBgn0035402.1;Dir=sensecoverage=100.0;identity=99.9;matches=1763;mismatches=0;indels=1;unknowns=0;locus=RLOC_00009568
Chr1	stalkie_big_nohaplotig	exon	92972164	92972837	99	-	.	Parent=FBgn0035402.1.mrna1;Target=FBgn0035402.1 1090 1764 +
Chr1	stalkie_big_nohaplotig	exon	92972898	92973427	100	-	.	Parent=FBgn0035402.1.mrna1;Target=FBgn0035402.1 560 1089 +
Chr1	stalkie_big_nohaplotig	exon	92973485	92974043	100	-	.	Parent=FBgn0035402.1.mrna1;Target=FBgn0035402.1 1 559 +
Chr1	stalkie_big_nohaplotig	CDS	92972164	92972837	.	-	0	Parent=FBgn0035402.1.mrna1;Target=FBgn0035402.1 1090 1764 +
Chr1	stalkie_big_nohaplotig	CDS	92972898	92973427	.	-	2	Parent=FBgn0035402.1.mrna1;Target=FBgn0035402.1 560 1089 +
Chr1	stalkie_big_nohaplotig	CDS	92973485	92974043	.	-	0	Parent=FBgn0035402.1.mrna1;Target=FBgn0035402.1 1 559 +
Chr1	gffcl	locus	92975529	92975918	.	-	.	ID=RLOC_00009569;geneIDs=comp147910_c0_seq1.path1;transcripts=comp147910_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	92975529	92975918	.	-	.	ID=comp147910_c0_seq1.mrna1;geneID=comp147910_c0_seq1.path1;Name=comp147910_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=390;mismatches=0;indels=0;unknowns=0;Target=comp147910_c0_seq1 390 1 .;CDS_Target=comp147910_c0_seq1 85 2 .;locus=RLOC_00009569
Chr1	stalkie_big_nohaplotig	exon	92975529	92975918	100	-	.	Parent=comp147910_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	92975834	92975917	.	-	0	Parent=comp147910_c0_seq1.mrna1
Chr1	gffcl	locus	92977001	92977470	.	+	.	ID=RLOC_00009570;geneIDs=comp147414_c0_seq1.path1;transcripts=comp147414_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	92977001	92977470	.	+	.	ID=comp147414_c0_seq1.mrna1;geneID=comp147414_c0_seq1.path1;Name=comp147414_c0_seq1;Dir=indeterminatecoverage=97.5;identity=100.0;matches=470;mismatches=0;indels=0;unknowns=0;Target=comp147414_c0_seq1 470 1 .;CDS_Target=comp147414_c0_seq1 439 392 .;locus=RLOC_00009570
Chr1	stalkie_big_nohaplotig	exon	92977001	92977470	100	+	.	Parent=comp147414_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	92977392	92977439	.	+	0	Parent=comp147414_c0_seq1.mrna1
Chr1	gffcl	locus	92977526	92978310	.	-	.	ID=RLOC_00009571;geneIDs=comp154222_c0_seq1.path1;transcripts=comp154222_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	92977526	92978310	.	-	.	ID=comp154222_c0_seq1.mrna1;geneID=comp154222_c0_seq1.path1;Name=comp154222_c0_seq1;Dir=indeterminatecoverage=97.5;identity=99.9;matches=784;mismatches=1;indels=0;unknowns=0;Target=comp154222_c0_seq1 805 21 .;CDS_Target=comp154222_c0_seq1 183 22 .;locus=RLOC_00009571
Chr1	stalkie_big_nohaplotig	exon	92977526	92978310	99	-	.	Parent=comp154222_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	92978148	92978309	.	-	0	Parent=comp154222_c0_seq1.mrna1
Chr1	gffcl	locus	92978491	92979615	.	-	.	ID=RLOC_00009572;geneIDs=comp156931_c0_seq1.path1;transcripts=comp156931_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	92978491	92979615	.	-	.	ID=comp156931_c0_seq1.mrna1;geneID=comp156931_c0_seq1.path1;Name=comp156931_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.9;matches=1120;mismatches=5;indels=55;unknowns=0;Target=comp156931_c0_seq1 1180 1 .;CDS_Target=comp156931_c0_seq1 159 1 .;locus=RLOC_00009572
Chr1	stalkie_big_nohaplotig	exon	92978491	92979615	94	-	.	Parent=comp156931_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	92979457	92979615	.	-	0	Parent=comp156931_c0_seq1.mrna1
Chr1	gffcl	locus	92981774	93069567	.	-	.	ID=RLOC_00009573;geneIDs=FBgn0024277.1.path1;transcripts=FBgn0024277.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	92981774	93069567	.	-	.	ID=FBgn0024277.1.mrna1;geneID=FBgn0024277.1.path1;Name=FBgn0024277.1;Dir=sensecoverage=100.0;identity=100.0;matches=6951;mismatches=3;indels=0;unknowns=0;locus=RLOC_00009573
Chr1	stalkie_big_nohaplotig	exon	92981774	92981998	100	-	.	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 6730 6954 +
Chr1	stalkie_big_nohaplotig	exon	92982070	92982339	100	-	.	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 6460 6729 +
Chr1	stalkie_big_nohaplotig	exon	92982406	92982543	100	-	.	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 6322 6459 +
Chr1	stalkie_big_nohaplotig	exon	92982617	92982806	100	-	.	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 6132 6321 +
Chr1	stalkie_big_nohaplotig	exon	92983756	92983872	100	-	.	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 6015 6131 +
Chr1	stalkie_big_nohaplotig	exon	92985211	92985326	100	-	.	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 5899 6014 +
Chr1	stalkie_big_nohaplotig	exon	92985398	92985544	100	-	.	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 5752 5898 +
Chr1	stalkie_big_nohaplotig	exon	92985758	92985832	100	-	.	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 5677 5751 +
Chr1	stalkie_big_nohaplotig	exon	93001971	93002216	99	-	.	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 5431 5676 +
Chr1	stalkie_big_nohaplotig	exon	93002309	93002414	98	-	.	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 5325 5430 +
Chr1	stalkie_big_nohaplotig	exon	93017844	93017904	100	-	.	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 5264 5324 +
Chr1	stalkie_big_nohaplotig	exon	93017966	93018236	100	-	.	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 4993 5263 +
Chr1	stalkie_big_nohaplotig	exon	93050193	93050396	100	-	.	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 4789 4992 +
Chr1	stalkie_big_nohaplotig	exon	93050520	93050641	100	-	.	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 4667 4788 +
Chr1	stalkie_big_nohaplotig	exon	93051015	93051866	100	-	.	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 3815 4666 +
Chr1	stalkie_big_nohaplotig	exon	93051932	93052038	100	-	.	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 3708 3814 +
Chr1	stalkie_big_nohaplotig	exon	93052098	93052903	100	-	.	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 2902 3707 +
Chr1	stalkie_big_nohaplotig	exon	93052973	93053767	100	-	.	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 2107 2901 +
Chr1	stalkie_big_nohaplotig	exon	93053831	93055126	100	-	.	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 811 2106 +
Chr1	stalkie_big_nohaplotig	exon	93055190	93055742	100	-	.	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 258 810 +
Chr1	stalkie_big_nohaplotig	exon	93069311	93069567	100	-	.	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 1 257 +
Chr1	stalkie_big_nohaplotig	CDS	92981774	92981998	.	-	0	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 6730 6954 +
Chr1	stalkie_big_nohaplotig	CDS	92982070	92982339	.	-	0	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 6460 6729 +
Chr1	stalkie_big_nohaplotig	CDS	92982406	92982543	.	-	0	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 6322 6459 +
Chr1	stalkie_big_nohaplotig	CDS	92982617	92982806	.	-	1	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 6132 6321 +
Chr1	stalkie_big_nohaplotig	CDS	92983756	92983872	.	-	1	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 6015 6131 +
Chr1	stalkie_big_nohaplotig	CDS	92985211	92985326	.	-	0	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 5899 6014 +
Chr1	stalkie_big_nohaplotig	CDS	92985398	92985544	.	-	0	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 5752 5898 +
Chr1	stalkie_big_nohaplotig	CDS	92985758	92985832	.	-	0	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 5677 5751 +
Chr1	stalkie_big_nohaplotig	CDS	93001971	93002216	.	-	0	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 5431 5676 +
Chr1	stalkie_big_nohaplotig	CDS	93002309	93002414	.	-	1	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 5325 5430 +
Chr1	stalkie_big_nohaplotig	CDS	93017844	93017904	.	-	2	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 5264 5324 +
Chr1	stalkie_big_nohaplotig	CDS	93017966	93018236	.	-	0	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 4993 5263 +
Chr1	stalkie_big_nohaplotig	CDS	93050193	93050396	.	-	0	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 4789 4992 +
Chr1	stalkie_big_nohaplotig	CDS	93050520	93050641	.	-	2	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 4667 4788 +
Chr1	stalkie_big_nohaplotig	CDS	93051015	93051866	.	-	2	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 3815 4666 +
Chr1	stalkie_big_nohaplotig	CDS	93051932	93052038	.	-	1	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 3708 3814 +
Chr1	stalkie_big_nohaplotig	CDS	93052098	93052903	.	-	0	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 2902 3707 +
Chr1	stalkie_big_nohaplotig	CDS	93052973	93053767	.	-	0	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 2107 2901 +
Chr1	stalkie_big_nohaplotig	CDS	93053831	93055126	.	-	0	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 811 2106 +
Chr1	stalkie_big_nohaplotig	CDS	93055190	93055742	.	-	1	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 258 810 +
Chr1	stalkie_big_nohaplotig	CDS	93069311	93069567	.	-	0	Parent=FBgn0024277.1.mrna1;Target=FBgn0024277.1 1 257 +
Chr1	gffcl	locus	93021824	93022774	.	+	.	ID=RLOC_00009574;geneIDs=comp135039_c0_seq1.path1;transcripts=comp135039_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93021824	93022774	.	+	.	ID=comp135039_c0_seq1.mrna1;geneID=comp135039_c0_seq1.path1;Name=comp135039_c0_seq1;Dir=indeterminatecoverage=92.4;identity=93.2;matches=910;mismatches=41;indels=25;unknowns=0;Target=comp135039_c0_seq1 976 1 .;CDS_Target=comp135039_c0_seq1 490 338 .;locus=RLOC_00009574
Chr1	stalkie_big_nohaplotig	exon	93021824	93022774	93	+	.	Parent=comp135039_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	93022161	93022313	.	+	0	Parent=comp135039_c0_seq1.mrna1
Chr1	gffcl	locus	93041988	93042714	.	+	.	ID=RLOC_00009575;geneIDs=comp143758_c0_seq1.path1;transcripts=comp143758_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93041988	93042714	.	+	.	ID=comp143758_c0_seq1.mrna1;geneID=comp143758_c0_seq1.path1;Name=comp143758_c0_seq1;Dir=indeterminatecoverage=97.1;identity=99.3;matches=722;mismatches=5;indels=0;unknowns=0;Target=comp143758_c0_seq1 749 23 .;CDS_Target=comp143758_c0_seq1 319 239 .;locus=RLOC_00009575
Chr1	stalkie_big_nohaplotig	exon	93041988	93042714	99	+	.	Parent=comp143758_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	93042204	93042284	.	+	0	Parent=comp143758_c0_seq1.mrna1
Chr1	gffcl	locus	93049445	94391696	.	.	.	ID=RLOC_00009576;geneIDs=Dv_FBgn0204253.2.path1,comp137546_c0_seq1.path1,comp140920_c2_seq1.path1,comp163427_c0_seq1.path1,comp163971_c0_seq1.path1;transcripts=comp163427_c0_seq1.mrna1,comp140920_c2_seq1.mrna1,comp137546_c0_seq1.mrna1,comp163971_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93049445	94391696	.	+	.	ID=comp163427_c0_seq1.mrna1;geneID=comp163427_c0_seq1.path1;Name=comp163427_c0_seq1;Dir=antisensecoverage=97.3;identity=88.4;matches=2724;mismatches=157;indels=201;unknowns=0;Target=comp163427_c0_seq1 1843 2016 .;locus=RLOC_00009576
Chr1	stalkie_big_nohaplotig	exon	93049445	93049464	100	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 3095 3114 -
Chr1	stalkie_big_nohaplotig	exon	93050638	93050646	100	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 3059 3067 -
Chr1	stalkie_big_nohaplotig	exon	93050968	93051007	59	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 3004 3054 -
Chr1	stalkie_big_nohaplotig	exon	93059141	93059172	53	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2961 3003 -
Chr1	stalkie_big_nohaplotig	exon	93060431	93060438	100	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2933 2940 -
Chr1	stalkie_big_nohaplotig	exon	93060687	93060695	100	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2921 2929 -
Chr1	stalkie_big_nohaplotig	exon	93060707	93060784	44	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2867 2919 -
Chr1	stalkie_big_nohaplotig	exon	93070579	93070581	100	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2864 2866 -
Chr1	stalkie_big_nohaplotig	exon	93072268	93072269	100	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2862 2863 -
Chr1	stalkie_big_nohaplotig	exon	93072425	93072428	75	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2858 2861 -
Chr1	stalkie_big_nohaplotig	exon	93074849	93074861	76	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2845 2857 -
Chr1	stalkie_big_nohaplotig	exon	93075049	93075061	84	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2832 2844 -
Chr1	stalkie_big_nohaplotig	exon	93077705	93077715	100	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2821 2831 -
Chr1	stalkie_big_nohaplotig	exon	93080686	93080786	56	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2710 2820 -
Chr1	stalkie_big_nohaplotig	exon	93094187	93094201	86	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2695 2709 -
Chr1	stalkie_big_nohaplotig	exon	93124266	93124270	100	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2690 2694 -
Chr1	stalkie_big_nohaplotig	exon	93130812	93130823	91	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2678 2689 -
Chr1	stalkie_big_nohaplotig	exon	93131579	93131613	63	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2635 2677 -
Chr1	stalkie_big_nohaplotig	exon	93147934	93147937	100	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2631 2634 -
Chr1	stalkie_big_nohaplotig	exon	93188525	93188526	100	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2629 2630 -
Chr1	stalkie_big_nohaplotig	exon	93194575	93194587	84	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2616 2628 -
Chr1	stalkie_big_nohaplotig	exon	93197933	93197942	100	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2606 2615 -
Chr1	stalkie_big_nohaplotig	exon	93200734	93200738	100	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2601 2605 -
Chr1	stalkie_big_nohaplotig	exon	93207700	93207701	100	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2599 2600 -
Chr1	stalkie_big_nohaplotig	exon	93215721	93215724	100	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2595 2598 -
Chr1	stalkie_big_nohaplotig	exon	93230644	93230655	100	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2583 2594 -
Chr1	stalkie_big_nohaplotig	exon	93246275	93246276	100	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2581 2582 -
Chr1	stalkie_big_nohaplotig	exon	93247033	93247041	100	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2572 2580 -
Chr1	stalkie_big_nohaplotig	exon	93250524	93250530	100	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2565 2571 -
Chr1	stalkie_big_nohaplotig	exon	93257128	93257183	61	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 2496 2549 -
Chr1	stalkie_big_nohaplotig	exon	94388863	94390006	89	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 1252 2495 -
Chr1	stalkie_big_nohaplotig	exon	94390452	94391696	96	+	.	Parent=comp163427_c0_seq1.mrna1;Target=comp163427_c0_seq1 1 1243 -
Chr1	stalkie_big_nohaplotig	CDS	94389342	94389515	.	+	0	Parent=comp163427_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93059135	93059798	.	+	.	ID=comp140920_c2_seq1.mrna1;geneID=comp140920_c2_seq1.path1;Name=comp140920_c2_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=664;mismatches=0;indels=0;unknowns=0;Target=comp140920_c2_seq1 664 1 .;CDS_Target=comp140920_c2_seq1 664 434 .;locus=RLOC_00009576
Chr1	stalkie_big_nohaplotig	exon	93059135	93059798	100	+	.	Parent=comp140920_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	93059568	93059798	.	+	0	Parent=comp140920_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93072007	93072331	.	-	.	ID=comp137546_c0_seq1.mrna1;geneID=comp137546_c0_seq1.path1;Name=comp137546_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=325;mismatches=0;indels=0;unknowns=0;Target=comp137546_c0_seq1 325 1 .;CDS_Target=comp137546_c0_seq1 137 3 .;locus=RLOC_00009576
Chr1	stalkie_big_nohaplotig	exon	93072007	93072331	100	-	.	Parent=comp137546_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	93072195	93072329	.	-	0	Parent=comp137546_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93210048	93219005	.	+	.	ID=comp163971_c0_seq1.mrna1;geneID=comp163971_c0_seq1.path1;Name=comp163971_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=4125;mismatches=44;indels=20;unknowns=0;locus=RLOC_00009576
Chr1	stalkie_big_nohaplotig	exon	93210048	93210988	97	+	.	Parent=comp163971_c0_seq1.mrna1;Target=comp163971_c0_seq1 932 1 .
Chr1	stalkie_big_nohaplotig	exon	93215631	93215905	98	+	.	Parent=comp163971_c0_seq1.mrna1;Target=comp163971_c0_seq1 1207 933 .
Chr1	stalkie_big_nohaplotig	exon	93216044	93219005	98	+	.	Parent=comp163971_c0_seq1.mrna1;Target=comp163971_c0_seq1 4194 1222 .
Chr1	stalkie_big_nohaplotig	CDS	93215901	93215905	.	+	0	Parent=comp163971_c0_seq1.mrna1;Target=comp163971_c0_seq1 1207 1203 .
Chr1	stalkie_big_nohaplotig	CDS	93216044	93216081	.	+	1	Parent=comp163971_c0_seq1.mrna1;Target=comp163971_c0_seq1 1259 1222 .
Chr1	gffcl	locus	93072883	93073805	.	+	.	ID=RLOC_00009577;geneIDs=FBgn0035181.1.path1;transcripts=FBgn0035181.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93072883	93073805	.	+	.	ID=FBgn0035181.1.mrna1;geneID=FBgn0035181.1.path1;Name=FBgn0035181.1;Dir=sensecoverage=100.0;identity=100.0;matches=813;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009577
Chr1	stalkie_big_nohaplotig	exon	93072883	93073117	100	+	.	Parent=FBgn0035181.1.mrna1;Target=FBgn0035181.1 1 235 +
Chr1	stalkie_big_nohaplotig	exon	93073172	93073568	100	+	.	Parent=FBgn0035181.1.mrna1;Target=FBgn0035181.1 236 632 +
Chr1	stalkie_big_nohaplotig	exon	93073625	93073805	100	+	.	Parent=FBgn0035181.1.mrna1;Target=FBgn0035181.1 633 813 +
Chr1	stalkie_big_nohaplotig	CDS	93072883	93073117	.	+	0	Parent=FBgn0035181.1.mrna1;Target=FBgn0035181.1 1 235 +
Chr1	stalkie_big_nohaplotig	CDS	93073172	93073568	.	+	2	Parent=FBgn0035181.1.mrna1;Target=FBgn0035181.1 236 632 +
Chr1	stalkie_big_nohaplotig	CDS	93073625	93073805	.	+	1	Parent=FBgn0035181.1.mrna1;Target=FBgn0035181.1 633 813 +
Chr1	gffcl	locus	93078814	93080172	.	+	.	ID=RLOC_00009578;geneIDs=comp160280_c0_seq1.path1;transcripts=comp160280_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93078814	93080172	.	+	.	ID=comp160280_c0_seq1.mrna1;geneID=comp160280_c0_seq1.path1;Name=comp160280_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.4;matches=1078;mismatches=24;indels=65;unknowns=0;Target=comp160280_c0_seq1 154 2 .;locus=RLOC_00009578
Chr1	stalkie_big_nohaplotig	exon	93078814	93079878	91	+	.	Parent=comp160280_c0_seq1.mrna1;Target=comp160280_c0_seq1 1044 1 .
Chr1	stalkie_big_nohaplotig	exon	93080093	93080172	100	+	.	Parent=comp160280_c0_seq1.mrna1;Target=comp160280_c0_seq1 1124 1045 .
Chr1	stalkie_big_nohaplotig	CDS	93078815	93078967	.	+	0	Parent=comp160280_c0_seq1.mrna1
Chr1	gffcl	locus	93187612	93189208	.	-	.	ID=RLOC_00009579;geneIDs=comp132479_c0_seq1.path1;transcripts=comp132479_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93187612	93189208	.	-	.	ID=comp132479_c0_seq1.mrna1;geneID=comp132479_c0_seq1.path1;Name=comp132479_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=1462;mismatches=0;indels=6;unknowns=0;locus=RLOC_00009579
Chr1	stalkie_big_nohaplotig	exon	93187612	93188162	99	-	.	Parent=comp132479_c0_seq1.mrna1;Target=comp132479_c0_seq1 1 546 -
Chr1	stalkie_big_nohaplotig	exon	93188218	93188467	99	-	.	Parent=comp132479_c0_seq1.mrna1;Target=comp132479_c0_seq1 547 797 -
Chr1	stalkie_big_nohaplotig	exon	93188543	93189208	100	-	.	Parent=comp132479_c0_seq1.mrna1;Target=comp132479_c0_seq1 798 1463 -
Chr1	stalkie_big_nohaplotig	CDS	93188301	93188467	.	-	0	Parent=comp132479_c0_seq1.mrna1;Target=comp132479_c0_seq1 630 797 .
Chr1	stalkie_big_nohaplotig	CDS	93188543	93188554	.	-	0	Parent=comp132479_c0_seq1.mrna1;Target=comp132479_c0_seq1 798 809 .
Chr1	gffcl	locus	93240558	93240859	.	-	.	ID=RLOC_00009580;geneIDs=comp135107_c0_seq1.path1;transcripts=comp135107_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93240558	93240859	.	-	.	ID=comp135107_c0_seq1.mrna1;geneID=comp135107_c0_seq1.path1;Name=comp135107_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=300;mismatches=2;indels=0;unknowns=0;Target=comp135107_c0_seq1 302 1 .;CDS_Target=comp135107_c0_seq1 119 3 .;locus=RLOC_00009580
Chr1	stalkie_big_nohaplotig	exon	93240558	93240859	99	-	.	Parent=comp135107_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	93240741	93240857	.	-	0	Parent=comp135107_c0_seq1.mrna1
Chr1	gffcl	locus	93245684	93246214	.	+	.	ID=RLOC_00009581;geneIDs=comp149394_c2_seq1.path1;transcripts=comp149394_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93245684	93246214	.	+	.	ID=comp149394_c2_seq1.mrna1;geneID=comp149394_c2_seq1.path1;Name=comp149394_c2_seq1;Dir=indeterminatecoverage=99.5;identity=96.1;matches=524;mismatches=7;indels=14;unknowns=0;Target=comp149394_c2_seq1 548 4 .;CDS_Target=comp149394_c2_seq1 360 253 .;locus=RLOC_00009581
Chr1	stalkie_big_nohaplotig	exon	93245684	93246214	96	+	.	Parent=comp149394_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	93245933	93246040	.	+	0	Parent=comp149394_c2_seq1.mrna1
Chr1	gffcl	locus	93247380	93247722	.	-	.	ID=RLOC_00009582;geneIDs=FBgn0261791.1.path1;transcripts=FBgn0261791.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93247380	93247722	.	-	.	ID=FBgn0261791.1.mrna1;geneID=FBgn0261791.1.path1;Name=FBgn0261791.1;Dir=sensecoverage=100.0;identity=100.0;matches=234;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009582
Chr1	stalkie_big_nohaplotig	exon	93247380	93247427	100	-	.	Parent=FBgn0261791.1.mrna1;Target=FBgn0261791.1 187 234 +
Chr1	stalkie_big_nohaplotig	exon	93247484	93247631	100	-	.	Parent=FBgn0261791.1.mrna1;Target=FBgn0261791.1 39 186 +
Chr1	stalkie_big_nohaplotig	exon	93247685	93247722	100	-	.	Parent=FBgn0261791.1.mrna1;Target=FBgn0261791.1 1 38 +
Chr1	stalkie_big_nohaplotig	CDS	93247380	93247427	.	-	0	Parent=FBgn0261791.1.mrna1;Target=FBgn0261791.1 187 234 +
Chr1	stalkie_big_nohaplotig	CDS	93247484	93247631	.	-	1	Parent=FBgn0261791.1.mrna1;Target=FBgn0261791.1 39 186 +
Chr1	stalkie_big_nohaplotig	CDS	93247685	93247722	.	-	0	Parent=FBgn0261791.1.mrna1;Target=FBgn0261791.1 1 38 +
Chr1	gffcl	locus	93251506	93251732	.	+	.	ID=RLOC_00009583;geneIDs=comp317218_c0_seq1.path1;transcripts=comp317218_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93251506	93251732	.	+	.	ID=comp317218_c0_seq1.mrna1;geneID=comp317218_c0_seq1.path1;Name=comp317218_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=227;mismatches=0;indels=0;unknowns=0;Target=comp317218_c0_seq1 227 1 .;CDS_Target=comp317218_c0_seq1 158 84 .;locus=RLOC_00009583
Chr1	stalkie_big_nohaplotig	exon	93251506	93251732	100	+	.	Parent=comp317218_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	93251589	93251663	.	+	0	Parent=comp317218_c0_seq1.mrna1
Chr1	gffcl	locus	93254312	93255079	.	-	.	ID=RLOC_00009584;geneIDs=FBgn0010412.3.path1;transcripts=FBgn0010412.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93254312	93255079	.	-	.	ID=FBgn0010412.3.mrna1;geneID=FBgn0010412.3.path1;Name=FBgn0010412.3;Dir=sensecoverage=100.0;identity=100.0;matches=534;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009584
Chr1	stalkie_big_nohaplotig	exon	93254312	93254708	100	-	.	Parent=FBgn0010412.3.mrna1;Target=FBgn0010412.3 138 534 +
Chr1	stalkie_big_nohaplotig	exon	93254764	93254834	100	-	.	Parent=FBgn0010412.3.mrna1;Target=FBgn0010412.3 67 137 +
Chr1	stalkie_big_nohaplotig	exon	93255014	93255079	100	-	.	Parent=FBgn0010412.3.mrna1;Target=FBgn0010412.3 1 66 +
Chr1	stalkie_big_nohaplotig	CDS	93254312	93254708	.	-	1	Parent=FBgn0010412.3.mrna1;Target=FBgn0010412.3 138 534 +
Chr1	stalkie_big_nohaplotig	CDS	93254764	93254834	.	-	0	Parent=FBgn0010412.3.mrna1;Target=FBgn0010412.3 67 137 +
Chr1	stalkie_big_nohaplotig	CDS	93255014	93255079	.	-	0	Parent=FBgn0010412.3.mrna1;Target=FBgn0010412.3 1 66 +
Chr1	gffcl	locus	93472320	93982523	.	-	.	ID=RLOC_00009588;geneIDs=FBgn0264270.1.path1,comp158530_c0_seq1.path1;transcripts=comp158530_c0_seq1.mrna1,FBgn0264270.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93472320	93982523	.	-	.	ID=comp158530_c0_seq1.mrna1;geneID=comp158530_c0_seq1.path1;Name=comp158530_c0_seq1;Dir=sensecoverage=87.2;identity=99.4;matches=1570;mismatches=6;indels=3;unknowns=0;locus=RLOC_00009588
Chr1	stalkie_big_nohaplotig	exon	93472320	93472328	100	-	.	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 1572 1580 +
Chr1	stalkie_big_nohaplotig	exon	93475359	93475364	100	-	.	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 1566 1571 +
Chr1	stalkie_big_nohaplotig	exon	93477836	93477838	100	-	.	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 1563 1565 +
Chr1	stalkie_big_nohaplotig	exon	93490153	93490154	100	-	.	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 1561 1562 +
Chr1	stalkie_big_nohaplotig	exon	93513681	93513693	92	-	.	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 1548 1560 +
Chr1	stalkie_big_nohaplotig	exon	93514325	93514331	100	-	.	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 1541 1547 +
Chr1	stalkie_big_nohaplotig	exon	93519619	93519621	100	-	.	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 1538 1540 +
Chr1	stalkie_big_nohaplotig	exon	93526306	93526317	75	-	.	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 1526 1537 +
Chr1	stalkie_big_nohaplotig	exon	93526412	93526415	100	-	.	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 1522 1525 +
Chr1	stalkie_big_nohaplotig	exon	93529857	93529861	80	-	.	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 1517 1521 +
Chr1	stalkie_big_nohaplotig	exon	93532218	93532221	100	-	.	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 1513 1516 +
Chr1	stalkie_big_nohaplotig	exon	93540232	93540237	100	-	.	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 1507 1512 +
Chr1	stalkie_big_nohaplotig	exon	93548062	93548072	71	-	.	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 1493 1506 +
Chr1	stalkie_big_nohaplotig	exon	93554149	93554157	100	-	.	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 1484 1492 +
Chr1	stalkie_big_nohaplotig	exon	93558014	93558085	100	-	.	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 1412 1483 +
Chr1	stalkie_big_nohaplotig	exon	93695375	93695577	100	-	.	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 1209 1411 +
Chr1	stalkie_big_nohaplotig	exon	93695675	93695856	100	-	.	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 1027 1208 +
Chr1	stalkie_big_nohaplotig	exon	93802519	93802626	100	-	.	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 919 1026 +
Chr1	stalkie_big_nohaplotig	exon	93872956	93873264	100	-	.	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 610 918 +
Chr1	stalkie_big_nohaplotig	exon	93878711	93878756	100	-	.	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 564 609 +
Chr1	stalkie_big_nohaplotig	exon	93892343	93892518	100	-	.	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 388 563 +
Chr1	stalkie_big_nohaplotig	exon	93982138	93982523	100	-	.	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 2 387 +
Chr1	stalkie_big_nohaplotig	CDS	93558018	93558085	.	-	2	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 1412 1479 +
Chr1	stalkie_big_nohaplotig	CDS	93695375	93695577	.	-	1	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 1209 1411 +
Chr1	stalkie_big_nohaplotig	CDS	93695675	93695856	.	-	0	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 1027 1208 +
Chr1	stalkie_big_nohaplotig	CDS	93802519	93802626	.	-	0	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 919 1026 +
Chr1	stalkie_big_nohaplotig	CDS	93872956	93873264	.	-	0	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 610 918 +
Chr1	stalkie_big_nohaplotig	CDS	93878711	93878756	.	-	1	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 564 609 +
Chr1	stalkie_big_nohaplotig	CDS	93892343	93892350	.	-	0	Parent=comp158530_c0_seq1.mrna1;Target=comp158530_c0_seq1 556 563 +
Chr1	stalkie_big_nohaplotig	mRNA	93695313	93878756	.	-	.	ID=FBgn0264270.1.mrna1;geneID=FBgn0264270.1.path1;Name=FBgn0264270.1;Dir=sensecoverage=96.0;identity=100.0;matches=910;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009588
Chr1	stalkie_big_nohaplotig	exon	93695313	93695577	100	-	.	Parent=FBgn0264270.1.mrna1;Target=FBgn0264270.1 684 948 +
Chr1	stalkie_big_nohaplotig	exon	93695675	93695856	100	-	.	Parent=FBgn0264270.1.mrna1;Target=FBgn0264270.1 502 683 +
Chr1	stalkie_big_nohaplotig	exon	93802519	93802626	100	-	.	Parent=FBgn0264270.1.mrna1;Target=FBgn0264270.1 394 501 +
Chr1	stalkie_big_nohaplotig	exon	93872956	93873264	100	-	.	Parent=FBgn0264270.1.mrna1;Target=FBgn0264270.1 85 393 +
Chr1	stalkie_big_nohaplotig	exon	93878711	93878756	100	-	.	Parent=FBgn0264270.1.mrna1;Target=FBgn0264270.1 39 84 +
Chr1	stalkie_big_nohaplotig	CDS	93695313	93695577	.	-	1	Parent=FBgn0264270.1.mrna1;Target=FBgn0264270.1 684 948 +
Chr1	stalkie_big_nohaplotig	CDS	93695675	93695856	.	-	0	Parent=FBgn0264270.1.mrna1;Target=FBgn0264270.1 502 683 +
Chr1	stalkie_big_nohaplotig	CDS	93802519	93802626	.	-	0	Parent=FBgn0264270.1.mrna1;Target=FBgn0264270.1 394 501 +
Chr1	stalkie_big_nohaplotig	CDS	93872956	93873264	.	-	0	Parent=FBgn0264270.1.mrna1;Target=FBgn0264270.1 85 393 +
Chr1	stalkie_big_nohaplotig	CDS	93878711	93878755	.	-	0	Parent=FBgn0264270.1.mrna1;Target=FBgn0264270.1 40 84 +
Chr1	gffcl	locus	93556989	93557545	.	+	.	ID=RLOC_00009590;geneIDs=comp149391_c0_seq1.path1;transcripts=comp149391_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93556989	93557545	.	+	.	ID=comp149391_c0_seq1.mrna1;geneID=comp149391_c0_seq1.path1;Name=comp149391_c0_seq1;Dir=indeterminatecoverage=95.7;identity=100.0;matches=557;mismatches=0;indels=0;unknowns=0;Target=comp149391_c0_seq1 582 26 .;CDS_Target=comp149391_c0_seq1 405 295 .;locus=RLOC_00009590
Chr1	stalkie_big_nohaplotig	exon	93556989	93557545	100	+	.	Parent=comp149391_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	93557258	93557368	.	+	0	Parent=comp149391_c0_seq1.mrna1
Chr1	gffcl	locus	93691687	93691871	.	-	.	ID=RLOC_00009591;geneIDs=comp85298_c0_seq1.path2;transcripts=comp85298_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	93691687	93691871	.	-	.	ID=comp85298_c0_seq1.mrna2;geneID=comp85298_c0_seq1.path2;Name=comp85298_c0_seq1;Dir=indeterminatecoverage=56.7;identity=98.9;matches=183;mismatches=2;indels=0;unknowns=0;Target=comp85298_c0_seq1 326 142 .;CDS_Target=comp85298_c0_seq1 303 142 .;locus=RLOC_00009591
Chr1	stalkie_big_nohaplotig	exon	93691687	93691871	98	-	.	Parent=comp85298_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	93691710	93691871	.	-	0	Parent=comp85298_c0_seq1.mrna2
Chr1	gffcl	locus	93747337	93747377	.	-	.	ID=RLOC_00009592;geneIDs=comp70976_c0_seq1.path1;transcripts=comp70976_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93747337	93747377	.	-	.	ID=comp70976_c0_seq1.mrna1;geneID=comp70976_c0_seq1.path1;Name=comp70976_c0_seq1;Dir=indeterminatecoverage=14.6;identity=87.8;matches=36;mismatches=5;indels=0;unknowns=0;Target=comp70976_c0_seq1 41 1 .;locus=RLOC_00009592
Chr1	stalkie_big_nohaplotig	exon	93747337	93747377	87	-	.	Parent=comp70976_c0_seq1.mrna1
Chr1	gffcl	locus	93855684	93859284	.	+	.	ID=RLOC_00009593;geneIDs=comp157882_c2_seq1.path1;transcripts=comp157882_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93855684	93859284	.	+	.	ID=comp157882_c2_seq1.mrna1;geneID=comp157882_c2_seq1.path1;Name=comp157882_c2_seq1;Dir=indeterminatecoverage=95.4;identity=86.4;matches=546;mismatches=52;indels=34;unknowns=0;Target=comp157882_c2_seq1 54 4 .;locus=RLOC_00009593
Chr1	stalkie_big_nohaplotig	exon	93855684	93855925	77	+	.	Parent=comp157882_c2_seq1.mrna1;Target=comp157882_c2_seq1 268 2 .
Chr1	stalkie_big_nohaplotig	exon	93858809	93858871	93	+	.	Parent=comp157882_c2_seq1.mrna1;Target=comp157882_c2_seq1 330 269 .
Chr1	stalkie_big_nohaplotig	exon	93858989	93859284	92	+	.	Parent=comp157882_c2_seq1.mrna1;Target=comp157882_c2_seq1 630 331 .
Chr1	stalkie_big_nohaplotig	CDS	93855686	93855737	.	+	0	Parent=comp157882_c2_seq1.mrna1
Chr1	gffcl	locus	93857471	93858412	.	-	.	ID=RLOC_00009594;geneIDs=Dp_FBgn0249247.10.path1;transcripts=Dp_FBgn0249247.10.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93857471	93858412	.	-	.	ID=Dp_FBgn0249247.10.mrna1;geneID=Dp_FBgn0249247.10.path1;Name=Dp_FBgn0249247.10;Dir=indeterminatecoverage=100.0;identity=98.9;matches=932;mismatches=10;indels=0;unknowns=0;Target=Dp_FBgn0249247.10 942 1 .;locus=RLOC_00009594
Chr1	stalkie_big_nohaplotig	exon	93857471	93858412	98	-	.	Parent=Dp_FBgn0249247.10.mrna1
Chr1	stalkie_big_nohaplotig	CDS	93857471	93858412	.	-	0	Parent=Dp_FBgn0249247.10.mrna1
Chr1	gffcl	locus	93939007	93939727	.	-	.	ID=RLOC_00009595;geneIDs=comp161273_c1_seq1.path1;transcripts=comp161273_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93939007	93939727	.	-	.	ID=comp161273_c1_seq1.mrna1;geneID=comp161273_c1_seq1.path1;Name=comp161273_c1_seq1;Dir=indeterminatecoverage=80.1;identity=97.0;matches=703;mismatches=18;indels=4;unknowns=0;Target=comp161273_c1_seq1 729 5 .;CDS_Target=comp161273_c1_seq1 722 6 .;locus=RLOC_00009595
Chr1	stalkie_big_nohaplotig	exon	93939007	93939727	96	-	.	Parent=comp161273_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	93939014	93939726	.	-	0	Parent=comp161273_c1_seq1.mrna1
Chr1	gffcl	locus	93959057	93959090	.	-	.	ID=RLOC_00009596;geneIDs=comp151193_c0_seq1.path2;transcripts=comp151193_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	93959057	93959090	.	-	.	ID=comp151193_c0_seq1.mrna2;geneID=comp151193_c0_seq1.path2;Name=comp151193_c0_seq1;Dir=indeterminatecoverage=3.6;identity=100.0;matches=34;mismatches=0;indels=0;unknowns=0;Target=comp151193_c0_seq1 941 908 .;locus=RLOC_00009596
Chr1	stalkie_big_nohaplotig	exon	93959057	93959090	100	-	.	Parent=comp151193_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	93959057	93959090	.	-	2	Parent=comp151193_c0_seq1.mrna2
Chr1	gffcl	locus	93959383	93960195	.	-	.	ID=RLOC_00009597;geneIDs=ORF2745.path1;transcripts=ORF2745.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93959383	93960195	.	-	.	ID=ORF2745.mrna1;geneID=ORF2745.path1;Name=ORF2745;Dir=indeterminatecoverage=100.0;identity=99.3;matches=807;mismatches=6;indels=0;unknowns=0;Target=ORF2745 813 1 .;locus=RLOC_00009597
Chr1	stalkie_big_nohaplotig	exon	93959383	93960195	99	-	.	Parent=ORF2745.mrna1
Chr1	stalkie_big_nohaplotig	CDS	93959383	93960195	.	-	0	Parent=ORF2745.mrna1
Chr1	gffcl	locus	93960647	93962285	.	+	.	ID=RLOC_00009598;geneIDs=comp163862_c1_seq1.path1;transcripts=comp163862_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93960647	93962285	.	+	.	ID=comp163862_c1_seq1.mrna1;geneID=comp163862_c1_seq1.path1;Name=comp163862_c1_seq1;Dir=indeterminatecoverage=100.0;identity=93.1;matches=1540;mismatches=96;indels=18;unknowns=0;Target=comp163862_c1_seq1 1651 1 .;CDS_Target=comp163862_c1_seq1 1560 1258 .;locus=RLOC_00009598
Chr1	stalkie_big_nohaplotig	exon	93960647	93962285	93	+	.	Parent=comp163862_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	93961906	93962208	.	+	0	Parent=comp163862_c1_seq1.mrna1
Chr1	gffcl	locus	93977206	93978604	.	+	.	ID=RLOC_00009600;geneIDs=comp161221_c6_seq1.path1;transcripts=comp161221_c6_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	93977206	93978604	.	+	.	ID=comp161221_c6_seq1.mrna1;geneID=comp161221_c6_seq1.path1;Name=comp161221_c6_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1399;mismatches=0;indels=0;unknowns=0;Target=comp161221_c6_seq1 1399 1 .;CDS_Target=comp161221_c6_seq1 603 466 .;locus=RLOC_00009600
Chr1	stalkie_big_nohaplotig	exon	93977206	93978604	100	+	.	Parent=comp161221_c6_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	93977671	93977808	.	+	0	Parent=comp161221_c6_seq1.mrna1
Chr1	gffcl	locus	94090990	94092014	.	+	.	ID=RLOC_00009602;geneIDs=ORF1647.path2;transcripts=ORF1647.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	94090990	94092014	.	+	.	ID=ORF1647.mrna2;geneID=ORF1647.path2;Name=ORF1647;Dir=indeterminatecoverage=99.8;identity=93.1;matches=965;mismatches=60;indels=11;unknowns=0;Target=ORF1647 1036 1 .;CDS_Target=ORF1647 1035 223 .;locus=RLOC_00009602
Chr1	stalkie_big_nohaplotig	exon	94090990	94092014	93	+	.	Parent=ORF1647.mrna2
Chr1	stalkie_big_nohaplotig	CDS	94091208	94092013	.	+	0	Parent=ORF1647.mrna2
Chr1	gffcl	locus	94223054	94273619	.	.	.	ID=RLOC_00009603;geneIDs=FBgn0004656.1.path1,comp151287_c0_seq1.path1,comp160509_c0_seq1.path1,comp162423_c2_seq1.path1;transcripts=comp162423_c2_seq1.mrna1,FBgn0004656.1.mrna1,comp160509_c0_seq1.mrna1,comp151287_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94223054	94246096	.	+	.	ID=comp162423_c2_seq1.mrna1;geneID=comp162423_c2_seq1.path1;Name=comp162423_c2_seq1;Dir=antisensecoverage=90.8;identity=100.0;matches=7280;mismatches=0;indels=2;unknowns=0;Target=comp162423_c2_seq1 5067 5573 .;locus=RLOC_00009603
Chr1	stalkie_big_nohaplotig	exon	94223054	94224944	100	+	.	Parent=comp162423_c2_seq1.mrna1;Target=comp162423_c2_seq1 6130 8020 -
Chr1	stalkie_big_nohaplotig	exon	94225868	94226128	100	+	.	Parent=comp162423_c2_seq1.mrna1;Target=comp162423_c2_seq1 5869 6129 -
Chr1	stalkie_big_nohaplotig	exon	94226211	94227555	99	+	.	Parent=comp162423_c2_seq1.mrna1;Target=comp162423_c2_seq1 4523 5868 -
Chr1	stalkie_big_nohaplotig	exon	94228983	94230159	100	+	.	Parent=comp162423_c2_seq1.mrna1;Target=comp162423_c2_seq1 3346 4522 -
Chr1	stalkie_big_nohaplotig	exon	94230225	94230395	100	+	.	Parent=comp162423_c2_seq1.mrna1;Target=comp162423_c2_seq1 3175 3345 -
Chr1	stalkie_big_nohaplotig	exon	94232193	94232312	100	+	.	Parent=comp162423_c2_seq1.mrna1;Target=comp162423_c2_seq1 3055 3174 -
Chr1	stalkie_big_nohaplotig	exon	94236966	94237094	100	+	.	Parent=comp162423_c2_seq1.mrna1;Target=comp162423_c2_seq1 2926 3054 -
Chr1	stalkie_big_nohaplotig	exon	94242952	94243010	100	+	.	Parent=comp162423_c2_seq1.mrna1;Target=comp162423_c2_seq1 2867 2925 -
Chr1	stalkie_big_nohaplotig	exon	94243821	94244007	100	+	.	Parent=comp162423_c2_seq1.mrna1;Target=comp162423_c2_seq1 2680 2866 -
Chr1	stalkie_big_nohaplotig	exon	94244098	94245862	99	+	.	Parent=comp162423_c2_seq1.mrna1;Target=comp162423_c2_seq1 914 2679 -
Chr1	stalkie_big_nohaplotig	exon	94245922	94246096	100	+	.	Parent=comp162423_c2_seq1.mrna1;Target=comp162423_c2_seq1 739 913 -
Chr1	stalkie_big_nohaplotig	CDS	94226506	94227011	.	+	0	Parent=comp162423_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94226954	94237096	.	+	.	ID=FBgn0004656.1.mrna1;geneID=FBgn0004656.1.path1;Name=FBgn0004656.1;Dir=sensecoverage=100.0;identity=100.0;matches=2189;mismatches=0;indels=1;unknowns=0;Target=FBgn0004656.1 3 59 +;locus=RLOC_00009603
Chr1	stalkie_big_nohaplotig	exon	94226954	94227555	99	+	.	Parent=FBgn0004656.1.mrna1;Target=FBgn0004656.1 1 603 +
Chr1	stalkie_big_nohaplotig	exon	94228983	94230159	100	+	.	Parent=FBgn0004656.1.mrna1;Target=FBgn0004656.1 604 1780 +
Chr1	stalkie_big_nohaplotig	exon	94230225	94230383	100	+	.	Parent=FBgn0004656.1.mrna1;Target=FBgn0004656.1 1781 1939 +
Chr1	stalkie_big_nohaplotig	exon	94232193	94232312	100	+	.	Parent=FBgn0004656.1.mrna1;Target=FBgn0004656.1 1940 2059 +
Chr1	stalkie_big_nohaplotig	exon	94236966	94237096	100	+	.	Parent=FBgn0004656.1.mrna1;Target=FBgn0004656.1 2060 2190 +
Chr1	stalkie_big_nohaplotig	CDS	94226956	94227011	.	+	0	Parent=FBgn0004656.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94240031	94242973	.	-	.	ID=comp160509_c0_seq1.mrna1;geneID=comp160509_c0_seq1.path1;Name=comp160509_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=2940;mismatches=3;indels=3;unknowns=0;Target=comp160509_c0_seq1 2946 1 .;CDS_Target=comp160509_c0_seq1 2313 2170 .;locus=RLOC_00009603
Chr1	stalkie_big_nohaplotig	exon	94240031	94242973	99	-	.	Parent=comp160509_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	94240662	94240805	.	-	0	Parent=comp160509_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94241722	94273619	.	+	.	ID=comp151287_c0_seq1.mrna1;geneID=comp151287_c0_seq1.path1;Name=comp151287_c0_seq1;Dir=indeterminatecoverage=49.0;identity=93.2;matches=288;mismatches=13;indels=8;unknowns=0;locus=RLOC_00009603
Chr1	stalkie_big_nohaplotig	exon	94241722	94241731	100	+	.	Parent=comp151287_c0_seq1.mrna1;Target=comp151287_c0_seq1 289 280 .
Chr1	stalkie_big_nohaplotig	exon	94249505	94249511	100	+	.	Parent=comp151287_c0_seq1.mrna1;Target=comp151287_c0_seq1 296 290 .
Chr1	stalkie_big_nohaplotig	exon	94261177	94261182	100	+	.	Parent=comp151287_c0_seq1.mrna1;Target=comp151287_c0_seq1 302 297 .
Chr1	stalkie_big_nohaplotig	exon	94273342	94273619	92	+	.	Parent=comp151287_c0_seq1.mrna1;Target=comp151287_c0_seq1 588 303 .
Chr1	stalkie_big_nohaplotig	CDS	94241722	94241731	.	+	0	Parent=comp151287_c0_seq1.mrna1;Target=comp151287_c0_seq1 289 280 .
Chr1	stalkie_big_nohaplotig	CDS	94249505	94249511	.	+	2	Parent=comp151287_c0_seq1.mrna1;Target=comp151287_c0_seq1 296 290 .
Chr1	stalkie_big_nohaplotig	CDS	94261177	94261182	.	+	1	Parent=comp151287_c0_seq1.mrna1;Target=comp151287_c0_seq1 302 297 .
Chr1	stalkie_big_nohaplotig	CDS	94273342	94273390	.	+	1	Parent=comp151287_c0_seq1.mrna1;Target=comp151287_c0_seq1 351 303 .
Chr1	gffcl	locus	94273752	94274321	.	-	.	ID=RLOC_00009605;geneIDs=comp149029_c0_seq1.path1;transcripts=comp149029_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94273752	94274321	.	-	.	ID=comp149029_c0_seq1.mrna1;geneID=comp149029_c0_seq1.path1;Name=comp149029_c0_seq1;Dir=indeterminatecoverage=96.6;identity=100.0;matches=570;mismatches=0;indels=0;unknowns=0;Target=comp149029_c0_seq1 579 10 .;CDS_Target=comp149029_c0_seq1 244 125 .;locus=RLOC_00009605
Chr1	stalkie_big_nohaplotig	exon	94273752	94274321	100	-	.	Parent=comp149029_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	94274087	94274206	.	-	0	Parent=comp149029_c0_seq1.mrna1
Chr1	gffcl	locus	94279033	94279380	.	+	.	ID=RLOC_00009606;geneIDs=comp152429_c1_seq1.path1;transcripts=comp152429_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94279033	94279380	.	+	.	ID=comp152429_c1_seq1.mrna1;geneID=comp152429_c1_seq1.path1;Name=comp152429_c1_seq1;Dir=indeterminatecoverage=100.0;identity=92.8;matches=323;mismatches=25;indels=0;unknowns=0;Target=comp152429_c1_seq1 348 1 .;CDS_Target=comp152429_c1_seq1 34 2 .;locus=RLOC_00009606
Chr1	stalkie_big_nohaplotig	exon	94279033	94279380	92	+	.	Parent=comp152429_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	94279034	94279066	.	+	0	Parent=comp152429_c1_seq1.mrna1
Chr1	gffcl	locus	94346703	94347759	.	-	.	ID=RLOC_00009607;geneIDs=comp161869_c2_seq1.path1;transcripts=comp161869_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94346703	94347759	.	-	.	ID=comp161869_c2_seq1.mrna1;geneID=comp161869_c2_seq1.path1;Name=comp161869_c2_seq1;Dir=indeterminatecoverage=97.8;identity=94.8;matches=1005;mismatches=52;indels=3;unknowns=0;Target=comp161869_c2_seq1 1060 1 .;CDS_Target=comp161869_c2_seq1 129 1 .;locus=RLOC_00009607
Chr1	stalkie_big_nohaplotig	exon	94346703	94347759	94	-	.	Parent=comp161869_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	94347631	94347759	.	-	0	Parent=comp161869_c2_seq1.mrna1
Chr1	gffcl	locus	94353061	94355061	.	+	.	ID=RLOC_00009608;geneIDs=FBgn0029999.1.path1;transcripts=FBgn0029999.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94353061	94355061	.	+	.	ID=FBgn0029999.1.mrna1;geneID=FBgn0029999.1.path1;Name=FBgn0029999.1;Dir=sensecoverage=100.0;identity=100.0;matches=1950;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009608
Chr1	stalkie_big_nohaplotig	exon	94353061	94354255	100	+	.	Parent=FBgn0029999.1.mrna1;Target=FBgn0029999.1 1 1195 +
Chr1	stalkie_big_nohaplotig	exon	94354307	94355061	100	+	.	Parent=FBgn0029999.1.mrna1;Target=FBgn0029999.1 1196 1950 +
Chr1	stalkie_big_nohaplotig	CDS	94353061	94354255	.	+	0	Parent=FBgn0029999.1.mrna1;Target=FBgn0029999.1 1 1195 +
Chr1	stalkie_big_nohaplotig	CDS	94354307	94355061	.	+	2	Parent=FBgn0029999.1.mrna1;Target=FBgn0029999.1 1196 1950 +
Chr1	gffcl	locus	94355162	94356997	.	-	.	ID=RLOC_00009609;geneIDs=FBgn0030000.1.path1;transcripts=FBgn0030000.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94355162	94356997	.	-	.	ID=FBgn0030000.1.mrna1;geneID=FBgn0030000.1.path1;Name=FBgn0030000.1;Dir=sensecoverage=100.0;identity=99.7;matches=1669;mismatches=3;indels=2;unknowns=0;locus=RLOC_00009609
Chr1	stalkie_big_nohaplotig	exon	94355162	94355227	100	-	.	Parent=FBgn0030000.1.mrna1;Target=FBgn0030000.1 1609 1674 +
Chr1	stalkie_big_nohaplotig	exon	94355285	94355743	100	-	.	Parent=FBgn0030000.1.mrna1;Target=FBgn0030000.1 1150 1608 +
Chr1	stalkie_big_nohaplotig	exon	94355795	94356511	100	-	.	Parent=FBgn0030000.1.mrna1;Target=FBgn0030000.1 433 1149 +
Chr1	stalkie_big_nohaplotig	exon	94356568	94356997	98	-	.	Parent=FBgn0030000.1.mrna1;Target=FBgn0030000.1 1 432 +
Chr1	stalkie_big_nohaplotig	CDS	94355162	94355227	.	-	0	Parent=FBgn0030000.1.mrna1;Target=FBgn0030000.1 1609 1674 +
Chr1	stalkie_big_nohaplotig	CDS	94355285	94355743	.	-	0	Parent=FBgn0030000.1.mrna1;Target=FBgn0030000.1 1150 1608 +
Chr1	stalkie_big_nohaplotig	CDS	94355795	94356346	.	-	0	Parent=FBgn0030000.1.mrna1;Target=FBgn0030000.1 598 1149 +
Chr1	gffcl	locus	94406790	94408814	.	-	.	ID=RLOC_00009611;geneIDs=Dv_FBgn0201266.9.path1,comp162235_c1_seq1.path1;transcripts=comp162235_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94406790	94408814	.	-	.	ID=comp162235_c1_seq1.mrna1;geneID=comp162235_c1_seq1.path1;Name=comp162235_c1_seq1;Dir=sensecoverage=89.3;identity=95.2;matches=1358;mismatches=30;indels=39;unknowns=0;Target=comp162235_c1_seq1 145 192 +;locus=RLOC_00009611
Chr1	stalkie_big_nohaplotig	exon	94406790	94407198	99	-	.	Parent=comp162235_c1_seq1.mrna1;Target=comp162235_c1_seq1 1124 1534 +
Chr1	stalkie_big_nohaplotig	exon	94407672	94408216	91	-	.	Parent=comp162235_c1_seq1.mrna1;Target=comp162235_c1_seq1 613 1123 +
Chr1	stalkie_big_nohaplotig	exon	94408292	94408394	91	-	.	Parent=comp162235_c1_seq1.mrna1;Target=comp162235_c1_seq1 509 612 +
Chr1	stalkie_big_nohaplotig	exon	94408449	94408814	96	-	.	Parent=comp162235_c1_seq1.mrna1;Target=comp162235_c1_seq1 143 508 +
Chr1	stalkie_big_nohaplotig	CDS	94408765	94408812	.	-	0	Parent=comp162235_c1_seq1.mrna1
Chr1	gffcl	locus	94410101	94411209	.	+	.	ID=RLOC_00009612;geneIDs=comp152370_c2_seq1.path1;transcripts=comp152370_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94410101	94411209	.	+	.	ID=comp152370_c2_seq1.mrna1;geneID=comp152370_c2_seq1.path1;Name=comp152370_c2_seq1;Dir=sensecoverage=99.9;identity=98.8;matches=685;mismatches=7;indels=1;unknowns=0;locus=RLOC_00009612
Chr1	stalkie_big_nohaplotig	exon	94410101	94410152	98	+	.	Parent=comp152370_c2_seq1.mrna1;Target=comp152370_c2_seq1 1 52 +
Chr1	stalkie_big_nohaplotig	exon	94410220	94410523	100	+	.	Parent=comp152370_c2_seq1.mrna1;Target=comp152370_c2_seq1 53 356 +
Chr1	stalkie_big_nohaplotig	exon	94410874	94411209	97	+	.	Parent=comp152370_c2_seq1.mrna1;Target=comp152370_c2_seq1 357 693 +
Chr1	stalkie_big_nohaplotig	CDS	94410365	94410523	.	+	0	Parent=comp152370_c2_seq1.mrna1;Target=comp152370_c2_seq1 198 356 +
Chr1	stalkie_big_nohaplotig	CDS	94410874	94410921	.	+	0	Parent=comp152370_c2_seq1.mrna1;Target=comp152370_c2_seq1 357 404 +
Chr1	gffcl	locus	94511799	94512194	.	-	.	ID=RLOC_00009613;geneIDs=comp149450_c0_seq1.path1;transcripts=comp149450_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94511799	94512194	.	-	.	ID=comp149450_c0_seq1.mrna1;geneID=comp149450_c0_seq1.path1;Name=comp149450_c0_seq1;Dir=indeterminatecoverage=96.8;identity=99.0;matches=392;mismatches=4;indels=0;unknowns=0;Target=comp149450_c0_seq1 409 14 .;CDS_Target=comp149450_c0_seq1 222 151 .;locus=RLOC_00009613
Chr1	stalkie_big_nohaplotig	exon	94511799	94512194	98	-	.	Parent=comp149450_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	94511986	94512057	.	-	0	Parent=comp149450_c0_seq1.mrna1
Chr1	gffcl	locus	94512452	94513986	.	-	.	ID=RLOC_00009614;geneIDs=FBgn0262526.1.path1;transcripts=FBgn0262526.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94512452	94513986	.	-	.	ID=FBgn0262526.1.mrna1;geneID=FBgn0262526.1.path1;Name=FBgn0262526.1;Dir=sensecoverage=99.9;identity=100.0;matches=1483;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009614
Chr1	stalkie_big_nohaplotig	exon	94512452	94512735	100	-	.	Parent=FBgn0262526.1.mrna1;Target=FBgn0262526.1 1202 1485 +
Chr1	stalkie_big_nohaplotig	exon	94512788	94513986	100	-	.	Parent=FBgn0262526.1.mrna1;Target=FBgn0262526.1 3 1201 +
Chr1	stalkie_big_nohaplotig	CDS	94512452	94512735	.	-	2	Parent=FBgn0262526.1.mrna1;Target=FBgn0262526.1 1202 1485 +
Chr1	stalkie_big_nohaplotig	CDS	94512788	94513985	.	-	0	Parent=FBgn0262526.1.mrna1;Target=FBgn0262526.1 4 1201 +
Chr1	gffcl	locus	94575418	95854568	.	+	.	ID=RLOC_00009615;geneIDs=comp163058_c9_seq1.path1;transcripts=comp163058_c9_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94575418	95854568	.	+	.	ID=comp163058_c9_seq1.mrna1;geneID=comp163058_c9_seq1.path1;Name=comp163058_c9_seq1;Dir=indeterminatecoverage=91.3;identity=99.1;matches=2060;mismatches=6;indels=12;unknowns=0;Target=comp163058_c9_seq1 2036 1872 .;locus=RLOC_00009615
Chr1	stalkie_big_nohaplotig	exon	94575418	94575422	100	+	.	Parent=comp163058_c9_seq1.mrna1;Target=comp163058_c9_seq1 205 201 .
Chr1	stalkie_big_nohaplotig	exon	94587863	94587868	100	+	.	Parent=comp163058_c9_seq1.mrna1;Target=comp163058_c9_seq1 211 206 .
Chr1	stalkie_big_nohaplotig	exon	94608839	94608849	100	+	.	Parent=comp163058_c9_seq1.mrna1;Target=comp163058_c9_seq1 222 212 .
Chr1	stalkie_big_nohaplotig	exon	94632441	94632443	100	+	.	Parent=comp163058_c9_seq1.mrna1;Target=comp163058_c9_seq1 225 223 .
Chr1	stalkie_big_nohaplotig	exon	94636510	94636515	100	+	.	Parent=comp163058_c9_seq1.mrna1;Target=comp163058_c9_seq1 231 226 .
Chr1	stalkie_big_nohaplotig	exon	94684823	94684825	100	+	.	Parent=comp163058_c9_seq1.mrna1;Target=comp163058_c9_seq1 234 232 .
Chr1	stalkie_big_nohaplotig	exon	94690201	94690221	63	+	.	Parent=comp163058_c9_seq1.mrna1;Target=comp163058_c9_seq1 267 235 .
Chr1	stalkie_big_nohaplotig	exon	94695924	94695930	100	+	.	Parent=comp163058_c9_seq1.mrna1;Target=comp163058_c9_seq1 274 268 .
Chr1	stalkie_big_nohaplotig	exon	94719276	94719284	100	+	.	Parent=comp163058_c9_seq1.mrna1;Target=comp163058_c9_seq1 283 275 .
Chr1	stalkie_big_nohaplotig	exon	94731293	94731297	100	+	.	Parent=comp163058_c9_seq1.mrna1;Target=comp163058_c9_seq1 288 284 .
Chr1	stalkie_big_nohaplotig	exon	94739367	94739368	100	+	.	Parent=comp163058_c9_seq1.mrna1;Target=comp163058_c9_seq1 290 289 .
Chr1	stalkie_big_nohaplotig	exon	94741747	94741750	100	+	.	Parent=comp163058_c9_seq1.mrna1;Target=comp163058_c9_seq1 294 291 .
Chr1	stalkie_big_nohaplotig	exon	94743959	94743971	100	+	.	Parent=comp163058_c9_seq1.mrna1;Target=comp163058_c9_seq1 307 295 .
Chr1	stalkie_big_nohaplotig	exon	94758199	94758209	81	+	.	Parent=comp163058_c9_seq1.mrna1;Target=comp163058_c9_seq1 318 308 .
Chr1	stalkie_big_nohaplotig	exon	94761357	94761371	86	+	.	Parent=comp163058_c9_seq1.mrna1;Target=comp163058_c9_seq1 333 319 .
Chr1	stalkie_big_nohaplotig	exon	95810223	95810234	83	+	.	Parent=comp163058_c9_seq1.mrna1;Target=comp163058_c9_seq1 345 334 .
Chr1	stalkie_big_nohaplotig	exon	95810354	95810356	100	+	.	Parent=comp163058_c9_seq1.mrna1;Target=comp163058_c9_seq1 348 346 .
Chr1	stalkie_big_nohaplotig	exon	95810556	95810563	100	+	.	Parent=comp163058_c9_seq1.mrna1;Target=comp163058_c9_seq1 356 349 .
Chr1	stalkie_big_nohaplotig	exon	95813255	95813259	100	+	.	Parent=comp163058_c9_seq1.mrna1;Target=comp163058_c9_seq1 374 370 .
Chr1	stalkie_big_nohaplotig	exon	95826132	95826137	100	+	.	Parent=comp163058_c9_seq1.mrna1;Target=comp163058_c9_seq1 380 375 .
Chr1	stalkie_big_nohaplotig	exon	95828213	95828214	100	+	.	Parent=comp163058_c9_seq1.mrna1;Target=comp163058_c9_seq1 382 381 .
Chr1	stalkie_big_nohaplotig	exon	95852661	95854568	100	+	.	Parent=comp163058_c9_seq1.mrna1;Target=comp163058_c9_seq1 2290 383 .
Chr1	stalkie_big_nohaplotig	CDS	95854150	95854314	.	+	0	Parent=comp163058_c9_seq1.mrna1
Chr1	gffcl	locus	94636844	94639628	.	+	.	ID=RLOC_00009617;geneIDs=FBgn0025743.1.path1;transcripts=FBgn0025743.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94636844	94639628	.	+	.	ID=FBgn0025743.1.mrna1;geneID=FBgn0025743.1.path1;Name=FBgn0025743.1;Dir=sensecoverage=100.0;identity=100.0;matches=1740;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009617
Chr1	stalkie_big_nohaplotig	exon	94636844	94637944	100	+	.	Parent=FBgn0025743.1.mrna1;Target=FBgn0025743.1 1 1101 +
Chr1	stalkie_big_nohaplotig	exon	94637999	94638119	100	+	.	Parent=FBgn0025743.1.mrna1;Target=FBgn0025743.1 1102 1222 +
Chr1	stalkie_big_nohaplotig	exon	94638565	94638836	100	+	.	Parent=FBgn0025743.1.mrna1;Target=FBgn0025743.1 1223 1494 +
Chr1	stalkie_big_nohaplotig	exon	94639383	94639628	100	+	.	Parent=FBgn0025743.1.mrna1;Target=FBgn0025743.1 1495 1740 +
Chr1	stalkie_big_nohaplotig	CDS	94636844	94637944	.	+	0	Parent=FBgn0025743.1.mrna1;Target=FBgn0025743.1 1 1101 +
Chr1	stalkie_big_nohaplotig	CDS	94637999	94638119	.	+	0	Parent=FBgn0025743.1.mrna1;Target=FBgn0025743.1 1102 1222 +
Chr1	stalkie_big_nohaplotig	CDS	94638565	94638836	.	+	2	Parent=FBgn0025743.1.mrna1;Target=FBgn0025743.1 1223 1494 +
Chr1	stalkie_big_nohaplotig	CDS	94639383	94639628	.	+	0	Parent=FBgn0025743.1.mrna1;Target=FBgn0025743.1 1495 1740 +
Chr1	gffcl	locus	94640822	94644339	.	-	.	ID=RLOC_00009618;geneIDs=FBgn0023513.1.path1;transcripts=FBgn0023513.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94640822	94644339	.	-	.	ID=FBgn0023513.1.mrna1;geneID=FBgn0023513.1.path1;Name=FBgn0023513.1;Dir=sensecoverage=100.0;identity=100.0;matches=3390;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009618
Chr1	stalkie_big_nohaplotig	exon	94640822	94643286	100	-	.	Parent=FBgn0023513.1.mrna1;Target=FBgn0023513.1 926 3390 +
Chr1	stalkie_big_nohaplotig	exon	94643358	94643977	100	-	.	Parent=FBgn0023513.1.mrna1;Target=FBgn0023513.1 306 925 +
Chr1	stalkie_big_nohaplotig	exon	94644035	94644339	100	-	.	Parent=FBgn0023513.1.mrna1;Target=FBgn0023513.1 1 305 +
Chr1	stalkie_big_nohaplotig	CDS	94640822	94643286	.	-	2	Parent=FBgn0023513.1.mrna1;Target=FBgn0023513.1 926 3390 +
Chr1	stalkie_big_nohaplotig	CDS	94643358	94643977	.	-	1	Parent=FBgn0023513.1.mrna1;Target=FBgn0023513.1 306 925 +
Chr1	stalkie_big_nohaplotig	CDS	94644035	94644339	.	-	0	Parent=FBgn0023513.1.mrna1;Target=FBgn0023513.1 1 305 +
Chr1	gffcl	locus	94644678	94646506	.	+	.	ID=RLOC_00009619;geneIDs=FBgn0026143.1.path1;transcripts=FBgn0026143.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94644678	94646506	.	+	.	ID=FBgn0026143.1.mrna1;geneID=FBgn0026143.1.path1;Name=FBgn0026143.1;Dir=sensecoverage=100.0;identity=100.0;matches=1713;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009619
Chr1	stalkie_big_nohaplotig	exon	94644678	94645040	100	+	.	Parent=FBgn0026143.1.mrna1;Target=FBgn0026143.1 1 363 +
Chr1	stalkie_big_nohaplotig	exon	94645103	94645638	100	+	.	Parent=FBgn0026143.1.mrna1;Target=FBgn0026143.1 364 899 +
Chr1	stalkie_big_nohaplotig	exon	94645693	94646506	100	+	.	Parent=FBgn0026143.1.mrna1;Target=FBgn0026143.1 900 1713 +
Chr1	stalkie_big_nohaplotig	CDS	94644678	94645040	.	+	0	Parent=FBgn0026143.1.mrna1;Target=FBgn0026143.1 1 363 +
Chr1	stalkie_big_nohaplotig	CDS	94645103	94645638	.	+	0	Parent=FBgn0026143.1.mrna1;Target=FBgn0026143.1 364 899 +
Chr1	stalkie_big_nohaplotig	CDS	94645693	94646506	.	+	1	Parent=FBgn0026143.1.mrna1;Target=FBgn0026143.1 900 1713 +
Chr1	gffcl	locus	94646828	94648374	.	-	.	ID=RLOC_00009620;geneIDs=FBgn0040337.1.path1;transcripts=FBgn0040337.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94646828	94648374	.	-	.	ID=FBgn0040337.1.mrna1;geneID=FBgn0040337.1.path1;Name=FBgn0040337.1;Dir=sensecoverage=100.0;identity=100.0;matches=1224;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009620
Chr1	stalkie_big_nohaplotig	exon	94646828	94647289	100	-	.	Parent=FBgn0040337.1.mrna1;Target=FBgn0040337.1 763 1224 +
Chr1	stalkie_big_nohaplotig	exon	94647362	94647588	100	-	.	Parent=FBgn0040337.1.mrna1;Target=FBgn0040337.1 536 762 +
Chr1	stalkie_big_nohaplotig	exon	94647644	94647828	100	-	.	Parent=FBgn0040337.1.mrna1;Target=FBgn0040337.1 351 535 +
Chr1	stalkie_big_nohaplotig	exon	94647969	94648134	100	-	.	Parent=FBgn0040337.1.mrna1;Target=FBgn0040337.1 185 350 +
Chr1	stalkie_big_nohaplotig	exon	94648191	94648374	100	-	.	Parent=FBgn0040337.1.mrna1;Target=FBgn0040337.1 1 184 +
Chr1	stalkie_big_nohaplotig	CDS	94646828	94647289	.	-	0	Parent=FBgn0040337.1.mrna1;Target=FBgn0040337.1 763 1224 +
Chr1	stalkie_big_nohaplotig	CDS	94647362	94647588	.	-	2	Parent=FBgn0040337.1.mrna1;Target=FBgn0040337.1 536 762 +
Chr1	stalkie_big_nohaplotig	CDS	94647644	94647828	.	-	1	Parent=FBgn0040337.1.mrna1;Target=FBgn0040337.1 351 535 +
Chr1	stalkie_big_nohaplotig	CDS	94647969	94648134	.	-	2	Parent=FBgn0040337.1.mrna1;Target=FBgn0040337.1 185 350 +
Chr1	stalkie_big_nohaplotig	CDS	94648191	94648374	.	-	0	Parent=FBgn0040337.1.mrna1;Target=FBgn0040337.1 1 184 +
Chr1	gffcl	locus	94782668	94785073	.	-	.	ID=RLOC_00009621;geneIDs=FBgn0030243.1.path1;transcripts=FBgn0030243.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94782668	94785073	.	-	.	ID=FBgn0030243.1.mrna1;geneID=FBgn0030243.1.path1;Name=FBgn0030243.1;Dir=sensecoverage=66.5;identity=99.8;matches=1966;mismatches=1;indels=3;unknowns=0;locus=RLOC_00009621
Chr1	stalkie_big_nohaplotig	exon	94782668	94783757	100	-	.	Parent=FBgn0030243.1.mrna1;Target=FBgn0030243.1 881 1970 +
Chr1	stalkie_big_nohaplotig	exon	94783833	94783943	100	-	.	Parent=FBgn0030243.1.mrna1;Target=FBgn0030243.1 770 880 +
Chr1	stalkie_big_nohaplotig	exon	94784000	94784611	99	-	.	Parent=FBgn0030243.1.mrna1;Target=FBgn0030243.1 155 769 +
Chr1	stalkie_big_nohaplotig	exon	94784668	94784759	100	-	.	Parent=FBgn0030243.1.mrna1;Target=FBgn0030243.1 63 154 +
Chr1	stalkie_big_nohaplotig	exon	94785012	94785073	100	-	.	Parent=FBgn0030243.1.mrna1;Target=FBgn0030243.1 1 62 +
Chr1	stalkie_big_nohaplotig	CDS	94782670	94783757	.	-	2	Parent=FBgn0030243.1.mrna1;Target=FBgn0030243.1 881 1968 +
Chr1	stalkie_big_nohaplotig	CDS	94783833	94783943	.	-	2	Parent=FBgn0030243.1.mrna1;Target=FBgn0030243.1 770 880 +
Chr1	stalkie_big_nohaplotig	CDS	94784000	94784611	.	-	2	Parent=FBgn0030243.1.mrna1;Target=FBgn0030243.1 155 769 +
Chr1	stalkie_big_nohaplotig	CDS	94784668	94784759	.	-	1	Parent=FBgn0030243.1.mrna1;Target=FBgn0030243.1 63 154 +
Chr1	stalkie_big_nohaplotig	CDS	94785012	94785073	.	-	0	Parent=FBgn0030243.1.mrna1;Target=FBgn0030243.1 1 62 +
Chr1	gffcl	locus	94804965	94805268	.	-	.	ID=RLOC_00009622;geneIDs=comp724615_c0_seq1.path1;transcripts=comp724615_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94804965	94805268	.	-	.	ID=comp724615_c0_seq1.mrna1;geneID=comp724615_c0_seq1.path1;Name=comp724615_c0_seq1;Dir=indeterminatecoverage=98.7;identity=100.0;matches=304;mismatches=0;indels=0;unknowns=0;Target=comp724615_c0_seq1 304 1 .;CDS_Target=comp724615_c0_seq1 238 185 .;locus=RLOC_00009622
Chr1	stalkie_big_nohaplotig	exon	94804965	94805268	100	-	.	Parent=comp724615_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	94805031	94805084	.	-	0	Parent=comp724615_c0_seq1.mrna1
Chr1	gffcl	locus	94805517	94808844	.	-	.	ID=RLOC_00009623;geneIDs=comp160956_c0_seq1.path1;transcripts=comp160956_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94805517	94808844	.	-	.	ID=comp160956_c0_seq1.mrna1;geneID=comp160956_c0_seq1.path1;Name=comp160956_c0_seq1;Dir=sensecoverage=60.9;identity=99.0;matches=3228;mismatches=4;indels=29;unknowns=0;Target=comp160956_c0_seq1 2653 3141 +;locus=RLOC_00009623
Chr1	stalkie_big_nohaplotig	exon	94805517	94808622	98	-	.	Parent=comp160956_c0_seq1.mrna1;Target=comp160956_c0_seq1 2178 5312 +
Chr1	stalkie_big_nohaplotig	exon	94808719	94808844	100	-	.	Parent=comp160956_c0_seq1.mrna1;Target=comp160956_c0_seq1 2052 2177 +
Chr1	stalkie_big_nohaplotig	CDS	94807665	94808147	.	-	0	Parent=comp160956_c0_seq1.mrna1
Chr1	gffcl	locus	94974315	94974839	.	+	.	ID=RLOC_00009625;geneIDs=FBgn0029715.1.path1;transcripts=FBgn0029715.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94974315	94974839	.	+	.	ID=FBgn0029715.1.mrna1;geneID=FBgn0029715.1.path1;Name=FBgn0029715.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=525;mismatches=0;indels=0;unknowns=0;Target=FBgn0029715.1 525 1 .;locus=RLOC_00009625
Chr1	stalkie_big_nohaplotig	exon	94974315	94974839	100	+	.	Parent=FBgn0029715.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	94974315	94974839	.	+	0	Parent=FBgn0029715.1.mrna1
Chr1	gffcl	locus	94975205	94976006	.	-	.	ID=RLOC_00009626;geneIDs=FBgn0029714.1.path1;transcripts=FBgn0029714.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	94975205	94976006	.	-	.	ID=FBgn0029714.1.mrna1;geneID=FBgn0029714.1.path1;Name=FBgn0029714.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=753;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009626
Chr1	stalkie_big_nohaplotig	exon	94975205	94975768	100	-	.	Parent=FBgn0029714.1.mrna1;Target=FBgn0029714.1 753 190 .
Chr1	stalkie_big_nohaplotig	exon	94975818	94976006	100	-	.	Parent=FBgn0029714.1.mrna1;Target=FBgn0029714.1 189 1 .
Chr1	stalkie_big_nohaplotig	CDS	94975205	94975768	.	-	0	Parent=FBgn0029714.1.mrna1;Target=FBgn0029714.1 753 190 .
Chr1	stalkie_big_nohaplotig	CDS	94975818	94976006	.	-	0	Parent=FBgn0029714.1.mrna1;Target=FBgn0029714.1 189 1 .
Chr1	gffcl	locus	95002140	95003062	.	+	.	ID=RLOC_00009628;geneIDs=comp158266_c3_seq1.path1;transcripts=comp158266_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	95002140	95003062	.	+	.	ID=comp158266_c3_seq1.mrna1;geneID=comp158266_c3_seq1.path1;Name=comp158266_c3_seq1;Dir=indeterminatecoverage=95.3;identity=97.3;matches=906;mismatches=17;indels=8;unknowns=0;Target=comp158266_c3_seq1 931 1 .;CDS_Target=comp158266_c3_seq1 741 538 .;locus=RLOC_00009628
Chr1	stalkie_big_nohaplotig	exon	95002140	95003062	97	+	.	Parent=comp158266_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	95002677	95002872	.	+	0	Parent=comp158266_c3_seq1.mrna1
Chr1	gffcl	locus	95008320	95017390	.	-	.	ID=RLOC_00009630;geneIDs=FBgn0030245.2.path1;transcripts=FBgn0030245.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	95008320	95017390	.	-	.	ID=FBgn0030245.2.mrna1;geneID=FBgn0030245.2.path1;Name=FBgn0030245.2;Dir=sensecoverage=91.2;identity=99.9;matches=1195;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009630
Chr1	stalkie_big_nohaplotig	exon	95008320	95008448	100	-	.	Parent=FBgn0030245.2.mrna1;Target=FBgn0030245.2 1183 1311 +
Chr1	stalkie_big_nohaplotig	exon	95008507	95008763	100	-	.	Parent=FBgn0030245.2.mrna1;Target=FBgn0030245.2 926 1182 +
Chr1	stalkie_big_nohaplotig	exon	95016463	95016764	100	-	.	Parent=FBgn0030245.2.mrna1;Target=FBgn0030245.2 624 925 +
Chr1	stalkie_big_nohaplotig	exon	95016821	95017164	99	-	.	Parent=FBgn0030245.2.mrna1;Target=FBgn0030245.2 280 623 +
Chr1	stalkie_big_nohaplotig	exon	95017227	95017390	100	-	.	Parent=FBgn0030245.2.mrna1;Target=FBgn0030245.2 116 279 +
Chr1	stalkie_big_nohaplotig	CDS	95008320	95008448	.	-	0	Parent=FBgn0030245.2.mrna1;Target=FBgn0030245.2 1183 1311 +
Chr1	stalkie_big_nohaplotig	CDS	95008507	95008763	.	-	2	Parent=FBgn0030245.2.mrna1;Target=FBgn0030245.2 926 1182 +
Chr1	stalkie_big_nohaplotig	CDS	95016463	95016764	.	-	1	Parent=FBgn0030245.2.mrna1;Target=FBgn0030245.2 624 925 +
Chr1	stalkie_big_nohaplotig	CDS	95016821	95017164	.	-	0	Parent=FBgn0030245.2.mrna1;Target=FBgn0030245.2 280 623 +
Chr1	stalkie_big_nohaplotig	CDS	95017227	95017388	.	-	0	Parent=FBgn0030245.2.mrna1;Target=FBgn0030245.2 118 279 +
Chr1	gffcl	locus	95011201	95014102	.	+	.	ID=RLOC_00009631;geneIDs=comp163962_c0_seq1.path1;transcripts=comp163962_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	95011201	95014102	.	+	.	ID=comp163962_c0_seq1.mrna1;geneID=comp163962_c0_seq1.path1;Name=comp163962_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=2879;mismatches=19;indels=33;unknowns=0;Target=comp163962_c0_seq1 2927 1 .;CDS_Target=comp163962_c0_seq1 2880 2248 .;locus=RLOC_00009631
Chr1	stalkie_big_nohaplotig	exon	95011201	95014102	98	+	.	Parent=comp163962_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	95013419	95014055	.	+	0	Parent=comp163962_c0_seq1.mrna1
Chr1	gffcl	locus	95017740	95028125	.	-	.	ID=RLOC_00009632;geneIDs=FBgn0030245.1.path1;transcripts=FBgn0030245.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	95017740	95028125	.	-	.	ID=FBgn0030245.1.mrna1;geneID=FBgn0030245.1.path1;Name=FBgn0030245.1;Dir=sensecoverage=91.2;identity=100.0;matches=1199;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009632
Chr1	stalkie_big_nohaplotig	exon	95017740	95017877	100	-	.	Parent=FBgn0030245.1.mrna1;Target=FBgn0030245.1 1177 1314 +
Chr1	stalkie_big_nohaplotig	exon	95017935	95018493	100	-	.	Parent=FBgn0030245.1.mrna1;Target=FBgn0030245.1 618 1176 +
Chr1	stalkie_big_nohaplotig	exon	95018549	95018892	100	-	.	Parent=FBgn0030245.1.mrna1;Target=FBgn0030245.1 274 617 +
Chr1	stalkie_big_nohaplotig	exon	95027968	95028125	100	-	.	Parent=FBgn0030245.1.mrna1;Target=FBgn0030245.1 116 273 +
Chr1	stalkie_big_nohaplotig	CDS	95017740	95017877	.	-	0	Parent=FBgn0030245.1.mrna1;Target=FBgn0030245.1 1177 1314 +
Chr1	stalkie_big_nohaplotig	CDS	95017935	95018493	.	-	1	Parent=FBgn0030245.1.mrna1;Target=FBgn0030245.1 618 1176 +
Chr1	stalkie_big_nohaplotig	CDS	95018549	95018892	.	-	0	Parent=FBgn0030245.1.mrna1;Target=FBgn0030245.1 274 617 +
Chr1	stalkie_big_nohaplotig	CDS	95027968	95028123	.	-	0	Parent=FBgn0030245.1.mrna1;Target=FBgn0030245.1 118 273 +
Chr1	gffcl	locus	95075297	96481754	.	.	.	ID=RLOC_00009633;geneIDs=comp134713_c0_seq1.path1,comp136664_c0_seq1.path1,comp162972_c2_seq1.path1,comp163499_c0_seq1.path1;transcripts=comp162972_c2_seq1.mrna1,comp136664_c0_seq1.mrna1,comp134713_c0_seq1.mrna1,comp163499_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	95075297	96481754	.	+	.	ID=comp162972_c2_seq1.mrna1;geneID=comp162972_c2_seq1.path1;Name=comp162972_c2_seq1;Dir=indeterminatecoverage=98.2;identity=76.7;matches=2635;mismatches=333;indels=468;unknowns=0;locus=RLOC_00009633
Chr1	stalkie_big_nohaplotig	exon	95075297	95075730	94	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 503 76 .
Chr1	stalkie_big_nohaplotig	exon	95078703	95078710	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 511 504 .
Chr1	stalkie_big_nohaplotig	exon	95108781	95108791	90	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 522 512 .
Chr1	stalkie_big_nohaplotig	exon	95108939	95108952	92	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 536 523 .
Chr1	stalkie_big_nohaplotig	exon	95114234	95114243	90	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 557 548 .
Chr1	stalkie_big_nohaplotig	exon	95138414	95138429	81	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 570 558 .
Chr1	stalkie_big_nohaplotig	exon	95156412	95156419	75	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 578 571 .
Chr1	stalkie_big_nohaplotig	exon	95159834	95159838	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 583 579 .
Chr1	stalkie_big_nohaplotig	exon	95174622	95174629	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 591 584 .
Chr1	stalkie_big_nohaplotig	exon	95177737	95177738	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 593 592 .
Chr1	stalkie_big_nohaplotig	exon	95181176	95181180	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 598 594 .
Chr1	stalkie_big_nohaplotig	exon	95184579	95184592	92	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 612 599 .
Chr1	stalkie_big_nohaplotig	exon	95251383	95251424	66	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 647 613 .
Chr1	stalkie_big_nohaplotig	exon	95253085	95253093	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 656 648 .
Chr1	stalkie_big_nohaplotig	exon	95257420	95257425	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 662 657 .
Chr1	stalkie_big_nohaplotig	exon	95287472	95287521	53	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 711 663 .
Chr1	stalkie_big_nohaplotig	exon	95293053	95293061	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 720 712 .
Chr1	stalkie_big_nohaplotig	exon	95297419	95297421	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 723 721 .
Chr1	stalkie_big_nohaplotig	exon	95317987	95317993	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 730 724 .
Chr1	stalkie_big_nohaplotig	exon	95342580	95342588	77	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 738 731 .
Chr1	stalkie_big_nohaplotig	exon	95344530	95344561	50	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 775 739 .
Chr1	stalkie_big_nohaplotig	exon	95357998	95358001	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 779 776 .
Chr1	stalkie_big_nohaplotig	exon	95360060	95360069	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 789 780 .
Chr1	stalkie_big_nohaplotig	exon	95368696	95368706	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 847 837 .
Chr1	stalkie_big_nohaplotig	exon	95372509	95372517	55	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 894 887 .
Chr1	stalkie_big_nohaplotig	exon	95377043	95377048	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 900 895 .
Chr1	stalkie_big_nohaplotig	exon	95383028	95383039	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 927 916 .
Chr1	stalkie_big_nohaplotig	exon	95391746	95391753	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 953 946 .
Chr1	stalkie_big_nohaplotig	exon	95397728	95397770	60	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 997 956 .
Chr1	stalkie_big_nohaplotig	exon	95400306	95400313	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1051 1044 .
Chr1	stalkie_big_nohaplotig	exon	95406622	95406636	73	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1066 1052 .
Chr1	stalkie_big_nohaplotig	exon	95413587	95413596	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1076 1067 .
Chr1	stalkie_big_nohaplotig	exon	95423203	95423212	90	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1108 1099 .
Chr1	stalkie_big_nohaplotig	exon	95426754	95426779	47	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1154 1109 .
Chr1	stalkie_big_nohaplotig	exon	95460869	95460874	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1177 1172 .
Chr1	stalkie_big_nohaplotig	exon	95463801	95463816	62	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1187 1178 .
Chr1	stalkie_big_nohaplotig	exon	95494983	95494993	72	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1195 1188 .
Chr1	stalkie_big_nohaplotig	exon	95505659	95505663	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1200 1196 .
Chr1	stalkie_big_nohaplotig	exon	95514096	95514099	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1204 1201 .
Chr1	stalkie_big_nohaplotig	exon	95514994	95515001	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1212 1205 .
Chr1	stalkie_big_nohaplotig	exon	95515017	95515024	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1226 1219 .
Chr1	stalkie_big_nohaplotig	exon	95518448	95518450	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1230 1228 .
Chr1	stalkie_big_nohaplotig	exon	95520638	95520645	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1238 1231 .
Chr1	stalkie_big_nohaplotig	exon	95520657	95520662	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1303 1298 .
Chr1	stalkie_big_nohaplotig	exon	95529823	95529832	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1314 1305 .
Chr1	stalkie_big_nohaplotig	exon	95537725	95537728	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1318 1315 .
Chr1	stalkie_big_nohaplotig	exon	95541943	95541955	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1331 1319 .
Chr1	stalkie_big_nohaplotig	exon	95552093	95552094	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1333 1332 .
Chr1	stalkie_big_nohaplotig	exon	95552187	95552203	82	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1350 1334 .
Chr1	stalkie_big_nohaplotig	exon	95558056	95558062	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1357 1351 .
Chr1	stalkie_big_nohaplotig	exon	95576209	95576221	92	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1370 1358 .
Chr1	stalkie_big_nohaplotig	exon	95584127	95584139	84	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1382 1371 .
Chr1	stalkie_big_nohaplotig	exon	95584923	95584935	84	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1395 1383 .
Chr1	stalkie_big_nohaplotig	exon	95649790	95649792	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1398 1396 .
Chr1	stalkie_big_nohaplotig	exon	95650252	95650259	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1406 1399 .
Chr1	stalkie_big_nohaplotig	exon	95656287	95656312	46	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1421 1407 .
Chr1	stalkie_big_nohaplotig	exon	95660787	95660789	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1424 1422 .
Chr1	stalkie_big_nohaplotig	exon	95665063	95665073	90	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1435 1425 .
Chr1	stalkie_big_nohaplotig	exon	95669407	95669413	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1442 1436 .
Chr1	stalkie_big_nohaplotig	exon	95680987	95680994	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1467 1460 .
Chr1	stalkie_big_nohaplotig	exon	95685209	95685211	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1470 1468 .
Chr1	stalkie_big_nohaplotig	exon	95685267	95685272	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1476 1471 .
Chr1	stalkie_big_nohaplotig	exon	95686256	95686262	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1483 1477 .
Chr1	stalkie_big_nohaplotig	exon	95689676	95689690	80	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1498 1484 .
Chr1	stalkie_big_nohaplotig	exon	95701842	95701851	90	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1508 1499 .
Chr1	stalkie_big_nohaplotig	exon	95708524	95708533	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1518 1509 .
Chr1	stalkie_big_nohaplotig	exon	95715201	95715209	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1544 1536 .
Chr1	stalkie_big_nohaplotig	exon	95735036	95735045	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1554 1545 .
Chr1	stalkie_big_nohaplotig	exon	95741652	95741659	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1577 1570 .
Chr1	stalkie_big_nohaplotig	exon	95746577	95746589	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1596 1584 .
Chr1	stalkie_big_nohaplotig	exon	95753865	95753875	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1607 1597 .
Chr1	stalkie_big_nohaplotig	exon	95760736	95760749	85	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1644 1631 .
Chr1	stalkie_big_nohaplotig	exon	95768510	95768512	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1647 1645 .
Chr1	stalkie_big_nohaplotig	exon	95776335	95776348	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1661 1648 .
Chr1	stalkie_big_nohaplotig	exon	95779597	95779602	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1700 1695 .
Chr1	stalkie_big_nohaplotig	exon	95781336	95781350	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1715 1701 .
Chr1	stalkie_big_nohaplotig	exon	95784309	95784315	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1726 1720 .
Chr1	stalkie_big_nohaplotig	exon	95784823	95784826	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1730 1727 .
Chr1	stalkie_big_nohaplotig	exon	95786731	95786739	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1739 1731 .
Chr1	stalkie_big_nohaplotig	exon	95786757	95786764	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1774 1767 .
Chr1	stalkie_big_nohaplotig	exon	95786766	95786775	90	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1833 1824 .
Chr1	stalkie_big_nohaplotig	exon	95801850	95801864	73	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1845 1834 .
Chr1	stalkie_big_nohaplotig	exon	95810935	95810955	53	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1884 1846 .
Chr1	stalkie_big_nohaplotig	exon	95817512	95817530	47	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1894 1885 .
Chr1	stalkie_big_nohaplotig	exon	95825451	95825459	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1905 1897 .
Chr1	stalkie_big_nohaplotig	exon	95832610	95832620	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1918 1908 .
Chr1	stalkie_big_nohaplotig	exon	95860913	95860916	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1986 1983 .
Chr1	stalkie_big_nohaplotig	exon	95861744	95861750	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1993 1987 .
Chr1	stalkie_big_nohaplotig	exon	95866080	95866083	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 1997 1994 .
Chr1	stalkie_big_nohaplotig	exon	95867969	95867980	91	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2009 1998 .
Chr1	stalkie_big_nohaplotig	exon	95879484	95879500	82	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2026 2010 .
Chr1	stalkie_big_nohaplotig	exon	95913167	95913171	80	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2062 2058 .
Chr1	stalkie_big_nohaplotig	exon	95936348	95936355	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2070 2063 .
Chr1	stalkie_big_nohaplotig	exon	95937040	95937042	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2073 2071 .
Chr1	stalkie_big_nohaplotig	exon	95941901	95941904	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2077 2074 .
Chr1	stalkie_big_nohaplotig	exon	95948807	95948813	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2084 2078 .
Chr1	stalkie_big_nohaplotig	exon	95956782	95956791	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2094 2085 .
Chr1	stalkie_big_nohaplotig	exon	95988273	95988278	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2100 2095 .
Chr1	stalkie_big_nohaplotig	exon	96009063	96009076	85	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2114 2101 .
Chr1	stalkie_big_nohaplotig	exon	96026978	96026985	50	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2144 2138 .
Chr1	stalkie_big_nohaplotig	exon	96058085	96058087	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2147 2145 .
Chr1	stalkie_big_nohaplotig	exon	96066726	96066734	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2157 2149 .
Chr1	stalkie_big_nohaplotig	exon	96085775	96085781	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2228 2222 .
Chr1	stalkie_big_nohaplotig	exon	96093163	96093166	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2232 2229 .
Chr1	stalkie_big_nohaplotig	exon	96103035	96103041	12	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2290 2233 .
Chr1	stalkie_big_nohaplotig	exon	96115423	96115432	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2300 2291 .
Chr1	stalkie_big_nohaplotig	exon	96127666	96127729	40	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2421 2315 .
Chr1	stalkie_big_nohaplotig	exon	96143949	96143955	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2428 2422 .
Chr1	stalkie_big_nohaplotig	exon	96147208	96147233	34	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2498 2429 .
Chr1	stalkie_big_nohaplotig	exon	96148059	96148073	86	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2512 2499 .
Chr1	stalkie_big_nohaplotig	exon	96159080	96159084	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2524 2520 .
Chr1	stalkie_big_nohaplotig	exon	96162712	96162715	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2528 2525 .
Chr1	stalkie_big_nohaplotig	exon	96166224	96166233	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2538 2529 .
Chr1	stalkie_big_nohaplotig	exon	96180144	96180151	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2564 2557 .
Chr1	stalkie_big_nohaplotig	exon	96180153	96180161	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2618 2610 .
Chr1	stalkie_big_nohaplotig	exon	96189498	96189546	51	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2692 2635 .
Chr1	stalkie_big_nohaplotig	exon	96191187	96191191	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2712 2708 .
Chr1	stalkie_big_nohaplotig	exon	96196711	96196744	48	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2749 2713 .
Chr1	stalkie_big_nohaplotig	exon	96198532	96198539	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2757 2750 .
Chr1	stalkie_big_nohaplotig	exon	96198544	96198553	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2800 2791 .
Chr1	stalkie_big_nohaplotig	exon	96201058	96201071	85	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2814 2801 .
Chr1	stalkie_big_nohaplotig	exon	96201338	96201341	50	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2818 2815 .
Chr1	stalkie_big_nohaplotig	exon	96207427	96207456	70	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2847 2819 .
Chr1	stalkie_big_nohaplotig	exon	96215564	96215599	46	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2910 2868 .
Chr1	stalkie_big_nohaplotig	exon	96222256	96222261	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2916 2911 .
Chr1	stalkie_big_nohaplotig	exon	96231448	96231455	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2924 2917 .
Chr1	stalkie_big_nohaplotig	exon	96239173	96239174	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2926 2925 .
Chr1	stalkie_big_nohaplotig	exon	96247596	96247603	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2934 2927 .
Chr1	stalkie_big_nohaplotig	exon	96254311	96254312	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2936 2935 .
Chr1	stalkie_big_nohaplotig	exon	96258750	96258765	68	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2949 2937 .
Chr1	stalkie_big_nohaplotig	exon	96286509	96286522	85	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 2963 2950 .
Chr1	stalkie_big_nohaplotig	exon	96299766	96299789	50	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3003 2988 .
Chr1	stalkie_big_nohaplotig	exon	96303894	96303901	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3011 3004 .
Chr1	stalkie_big_nohaplotig	exon	96312594	96312600	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3054 3048 .
Chr1	stalkie_big_nohaplotig	exon	96315561	96315599	64	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3099 3055 .
Chr1	stalkie_big_nohaplotig	exon	96317916	96317993	41	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3215 3101 .
Chr1	stalkie_big_nohaplotig	exon	96332531	96332536	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3221 3216 .
Chr1	stalkie_big_nohaplotig	exon	96338232	96338241	90	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3231 3222 .
Chr1	stalkie_big_nohaplotig	exon	96338833	96338842	80	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3241 3232 .
Chr1	stalkie_big_nohaplotig	exon	96342146	96342165	80	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3261 3242 .
Chr1	stalkie_big_nohaplotig	exon	96344981	96344987	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3268 3262 .
Chr1	stalkie_big_nohaplotig	exon	96356860	96356867	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3276 3269 .
Chr1	stalkie_big_nohaplotig	exon	96367126	96367143	20	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3348 3282 .
Chr1	stalkie_big_nohaplotig	exon	96373275	96373282	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3356 3349 .
Chr1	stalkie_big_nohaplotig	exon	96377514	96377554	50	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3436 3378 .
Chr1	stalkie_big_nohaplotig	exon	96379374	96379381	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3444 3437 .
Chr1	stalkie_big_nohaplotig	exon	96384525	96384529	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3449 3445 .
Chr1	stalkie_big_nohaplotig	exon	96393654	96393665	83	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3461 3450 .
Chr1	stalkie_big_nohaplotig	exon	96394446	96394495	52	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3528 3477 .
Chr1	stalkie_big_nohaplotig	exon	96394596	96394606	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3539 3529 .
Chr1	stalkie_big_nohaplotig	exon	96395804	96395814	90	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3550 3540 .
Chr1	stalkie_big_nohaplotig	exon	96399557	96399569	76	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3563 3551 .
Chr1	stalkie_big_nohaplotig	exon	96399767	96399768	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3584 3583 .
Chr1	stalkie_big_nohaplotig	exon	96401495	96401498	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3588 3585 .
Chr1	stalkie_big_nohaplotig	exon	96409414	96409424	90	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3599 3589 .
Chr1	stalkie_big_nohaplotig	exon	96416702	96416704	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3602 3600 .
Chr1	stalkie_big_nohaplotig	exon	96417108	96417114	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3631 3625 .
Chr1	stalkie_big_nohaplotig	exon	96418311	96418318	75	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3639 3632 .
Chr1	stalkie_big_nohaplotig	exon	96420316	96420319	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3643 3640 .
Chr1	stalkie_big_nohaplotig	exon	96431181	96431191	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3654 3644 .
Chr1	stalkie_big_nohaplotig	exon	96435142	96435151	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3678 3669 .
Chr1	stalkie_big_nohaplotig	exon	96435155	96435162	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3743 3736 .
Chr1	stalkie_big_nohaplotig	exon	96440985	96440996	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3760 3749 .
Chr1	stalkie_big_nohaplotig	exon	96441197	96441237	53	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3844 3804 .
Chr1	stalkie_big_nohaplotig	exon	96449722	96449813	44	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 3989 3863 .
Chr1	stalkie_big_nohaplotig	exon	96454311	96454319	88	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 4000 3992 .
Chr1	stalkie_big_nohaplotig	exon	96459372	96459511	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 4140 4001 .
Chr1	stalkie_big_nohaplotig	exon	96481334	96481448	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 4255 4141 .
Chr1	stalkie_big_nohaplotig	exon	96481503	96481754	100	+	.	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 4507 4256 .
Chr1	stalkie_big_nohaplotig	CDS	95174628	95174629	.	+	0	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 591 590 .
Chr1	stalkie_big_nohaplotig	CDS	95177737	95177738	.	+	1	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 593 592 .
Chr1	stalkie_big_nohaplotig	CDS	95181176	95181180	.	+	2	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 598 594 .
Chr1	stalkie_big_nohaplotig	CDS	95184579	95184592	.	+	0	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 612 599 .
Chr1	stalkie_big_nohaplotig	CDS	95251383	95251396	.	+	1	Parent=comp162972_c2_seq1.mrna1;Target=comp162972_c2_seq1 625 613 .
Chr1	stalkie_big_nohaplotig	mRNA	95257285	95257916	.	-	.	ID=comp136664_c0_seq1.mrna1;geneID=comp136664_c0_seq1.path1;Name=comp136664_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.8;matches=631;mismatches=1;indels=0;unknowns=0;Target=comp136664_c0_seq1 633 2 .;CDS_Target=comp136664_c0_seq1 138 4 .;locus=RLOC_00009633
Chr1	stalkie_big_nohaplotig	exon	95257285	95257916	99	-	.	Parent=comp136664_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	95257780	95257914	.	-	0	Parent=comp136664_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	95861330	95861946	.	-	.	ID=comp134713_c0_seq1.mrna1;geneID=comp134713_c0_seq1.path1;Name=comp134713_c0_seq1;Dir=indeterminatecoverage=98.1;identity=100.0;matches=617;mismatches=0;indels=0;unknowns=0;Target=comp134713_c0_seq1 629 13 .;CDS_Target=comp134713_c0_seq1 617 495 .;locus=RLOC_00009633
Chr1	stalkie_big_nohaplotig	exon	95861330	95861946	100	-	.	Parent=comp134713_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	95861342	95861464	.	-	0	Parent=comp134713_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	96331692	96332780	.	+	.	ID=comp163499_c0_seq1.mrna1;geneID=comp163499_c0_seq1.path1;Name=comp163499_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.6;matches=1063;mismatches=26;indels=0;unknowns=0;Target=comp163499_c0_seq1 1090 2 .;locus=RLOC_00009633
Chr1	stalkie_big_nohaplotig	exon	96331692	96332780	97	+	.	Parent=comp163499_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	96331692	96332780	.	+	0	Parent=comp163499_c0_seq1.mrna1
Chr1	gffcl	locus	95218402	95227962	.	-	.	ID=RLOC_00009636;geneIDs=Dp_FBgn0245412.2.path7;transcripts=Dp_FBgn0245412.2.mrna7
Chr1	stalkie_big_nohaplotig	mRNA	95218402	95227962	.	-	.	ID=Dp_FBgn0245412.2.mrna7;geneID=Dp_FBgn0245412.2.path7;Name=Dp_FBgn0245412.2;Dir=antisensecoverage=100.0;identity=98.7;matches=441;mismatches=6;indels=0;unknowns=0;Target=Dp_FBgn0245412.2 172 210 .;locus=RLOC_00009636
Chr1	stalkie_big_nohaplotig	exon	95218402	95218787	98	-	.	Parent=Dp_FBgn0245412.2.mrna7;Target=Dp_FBgn0245412.2 1 386 -
Chr1	stalkie_big_nohaplotig	exon	95227902	95227962	98	-	.	Parent=Dp_FBgn0245412.2.mrna7;Target=Dp_FBgn0245412.2 387 447 -
Chr1	stalkie_big_nohaplotig	CDS	95218573	95218611	.	-	0	Parent=Dp_FBgn0245412.2.mrna7
Chr1	gffcl	locus	95372597	95709331	.	+	.	ID=RLOC_00009638;geneIDs=comp162436_c11_seq1.path1;transcripts=comp162436_c11_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	95372597	95709331	.	+	.	ID=comp162436_c11_seq1.mrna1;geneID=comp162436_c11_seq1.path1;Name=comp162436_c11_seq1;Dir=indeterminatecoverage=55.4;identity=99.7;matches=287;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009638
Chr1	stalkie_big_nohaplotig	exon	95372597	95372606	100	+	.	Parent=comp162436_c11_seq1.mrna1;Target=comp162436_c11_seq1 37 28 .
Chr1	stalkie_big_nohaplotig	exon	95377019	95377022	100	+	.	Parent=comp162436_c11_seq1.mrna1;Target=comp162436_c11_seq1 83 80 .
Chr1	stalkie_big_nohaplotig	exon	95378304	95378311	100	+	.	Parent=comp162436_c11_seq1.mrna1;Target=comp162436_c11_seq1 91 84 .
Chr1	stalkie_big_nohaplotig	exon	95382827	95382833	100	+	.	Parent=comp162436_c11_seq1.mrna1;Target=comp162436_c11_seq1 98 92 .
Chr1	stalkie_big_nohaplotig	exon	95387654	95387656	100	+	.	Parent=comp162436_c11_seq1.mrna1;Target=comp162436_c11_seq1 101 99 .
Chr1	stalkie_big_nohaplotig	exon	95400276	95400281	100	+	.	Parent=comp162436_c11_seq1.mrna1;Target=comp162436_c11_seq1 107 102 .
Chr1	stalkie_big_nohaplotig	exon	95406527	95406532	100	+	.	Parent=comp162436_c11_seq1.mrna1;Target=comp162436_c11_seq1 113 108 .
Chr1	stalkie_big_nohaplotig	exon	95411101	95411104	100	+	.	Parent=comp162436_c11_seq1.mrna1;Target=comp162436_c11_seq1 117 114 .
Chr1	stalkie_big_nohaplotig	exon	95425515	95425520	100	+	.	Parent=comp162436_c11_seq1.mrna1;Target=comp162436_c11_seq1 123 118 .
Chr1	stalkie_big_nohaplotig	exon	95609087	95609088	100	+	.	Parent=comp162436_c11_seq1.mrna1;Target=comp162436_c11_seq1 125 124 .
Chr1	stalkie_big_nohaplotig	exon	95619431	95619439	100	+	.	Parent=comp162436_c11_seq1.mrna1;Target=comp162436_c11_seq1 134 126 .
Chr1	stalkie_big_nohaplotig	exon	95630889	95630895	100	+	.	Parent=comp162436_c11_seq1.mrna1;Target=comp162436_c11_seq1 142 136 .
Chr1	stalkie_big_nohaplotig	exon	95637157	95637165	100	+	.	Parent=comp162436_c11_seq1.mrna1;Target=comp162436_c11_seq1 151 143 .
Chr1	stalkie_big_nohaplotig	exon	95641474	95641617	99	+	.	Parent=comp162436_c11_seq1.mrna1;Target=comp162436_c11_seq1 298 155 .
Chr1	stalkie_big_nohaplotig	exon	95709270	95709331	100	+	.	Parent=comp162436_c11_seq1.mrna1;Target=comp162436_c11_seq1 360 299 .
Chr1	stalkie_big_nohaplotig	CDS	95641581	95641617	.	+	0	Parent=comp162436_c11_seq1.mrna1;Target=comp162436_c11_seq1 298 262 .
Chr1	stalkie_big_nohaplotig	CDS	95709270	95709313	.	+	2	Parent=comp162436_c11_seq1.mrna1;Target=comp162436_c11_seq1 342 299 .
Chr1	gffcl	locus	95404240	95404567	.	-	.	ID=RLOC_00009639;geneIDs=comp144400_c0_seq1.path1;transcripts=comp144400_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	95404240	95404567	.	-	.	ID=comp144400_c0_seq1.mrna1;geneID=comp144400_c0_seq1.path1;Name=comp144400_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=328;mismatches=0;indels=0;unknowns=0;Target=comp144400_c0_seq1 328 1 .;CDS_Target=comp144400_c0_seq1 128 3 .;locus=RLOC_00009639
Chr1	stalkie_big_nohaplotig	exon	95404240	95404567	100	-	.	Parent=comp144400_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	95404440	95404565	.	-	0	Parent=comp144400_c0_seq1.mrna1
Chr1	gffcl	locus	95418464	95419474	.	-	.	ID=RLOC_00009640;geneIDs=comp161774_c0_seq1.path3;transcripts=comp161774_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	95418464	95419474	.	-	.	ID=comp161774_c0_seq1.mrna3;geneID=comp161774_c0_seq1.path3;Name=comp161774_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=997;mismatches=10;indels=6;unknowns=0;Target=comp161774_c0_seq1 1009 1 .;CDS_Target=comp161774_c0_seq1 150 40 .;locus=RLOC_00009640
Chr1	stalkie_big_nohaplotig	exon	95418464	95419474	98	-	.	Parent=comp161774_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	95419324	95419435	.	-	0	Parent=comp161774_c0_seq1.mrna3
Chr1	gffcl	locus	95474203	95474818	.	-	.	ID=RLOC_00009641;geneIDs=comp161968_c1_seq1.path1;transcripts=comp161968_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	95474203	95474818	.	-	.	ID=comp161968_c1_seq1.mrna1;geneID=comp161968_c1_seq1.path1;Name=comp161968_c1_seq1;Dir=indeterminatecoverage=18.3;identity=94.4;matches=585;mismatches=30;indels=5;unknowns=0;Target=comp161968_c1_seq1 3374 2756 .;CDS_Target=comp161968_c1_seq1 2985 2854 .;locus=RLOC_00009641
Chr1	stalkie_big_nohaplotig	exon	95474203	95474818	94	-	.	Parent=comp161968_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	95474589	95474720	.	-	0	Parent=comp161968_c1_seq1.mrna1
Chr1	gffcl	locus	95549866	95550347	.	+	.	ID=RLOC_00009642;geneIDs=comp152975_c0_seq1.path6;transcripts=comp152975_c0_seq1.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	95549866	95550347	.	+	.	ID=comp152975_c0_seq1.mrna6;geneID=comp152975_c0_seq1.path6;Name=comp152975_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=477;mismatches=5;indels=0;unknowns=0;Target=comp152975_c0_seq1 482 1 .;CDS_Target=comp152975_c0_seq1 185 63 .;locus=RLOC_00009642
Chr1	stalkie_big_nohaplotig	exon	95549866	95550347	98	+	.	Parent=comp152975_c0_seq1.mrna6
Chr1	stalkie_big_nohaplotig	CDS	95549928	95550050	.	+	0	Parent=comp152975_c0_seq1.mrna6
Chr1	gffcl	locus	95641098	95644050	.	-	.	ID=RLOC_00009643;geneIDs=comp155604_c0_seq1.path2;transcripts=comp155604_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	95641098	95644050	.	-	.	ID=comp155604_c0_seq1.mrna2;geneID=comp155604_c0_seq1.path2;Name=comp155604_c0_seq1;Dir=sensecoverage=100.0;identity=97.5;matches=1081;mismatches=17;indels=11;unknowns=0;locus=RLOC_00009643
Chr1	stalkie_big_nohaplotig	exon	95641098	95641471	97	-	.	Parent=comp155604_c0_seq1.mrna2;Target=comp155604_c0_seq1 735 1109 +
Chr1	stalkie_big_nohaplotig	exon	95643235	95643555	98	-	.	Parent=comp155604_c0_seq1.mrna2;Target=comp155604_c0_seq1 414 734 +
Chr1	stalkie_big_nohaplotig	exon	95643648	95644050	96	-	.	Parent=comp155604_c0_seq1.mrna2;Target=comp155604_c0_seq1 1 413 +
Chr1	stalkie_big_nohaplotig	CDS	95641308	95641471	.	-	0	Parent=comp155604_c0_seq1.mrna2;Target=comp155604_c0_seq1 735 899 +
Chr1	stalkie_big_nohaplotig	CDS	95643235	95643555	.	-	0	Parent=comp155604_c0_seq1.mrna2;Target=comp155604_c0_seq1 414 734 +
Chr1	stalkie_big_nohaplotig	CDS	95643648	95643680	.	-	0	Parent=comp155604_c0_seq1.mrna2;Target=comp155604_c0_seq1 381 413 +
Chr1	gffcl	locus	95695668	95695813	.	+	.	ID=RLOC_00009644;geneIDs=comp135128_c0_seq1.path6;transcripts=comp135128_c0_seq1.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	95695668	95695813	.	+	.	ID=comp135128_c0_seq1.mrna6;geneID=comp135128_c0_seq1.path6;Name=comp135128_c0_seq1;Dir=indeterminatecoverage=46.9;identity=84.2;matches=123;mismatches=23;indels=0;unknowns=0;Target=comp135128_c0_seq1 309 164 .;CDS_Target=comp135128_c0_seq1 215 165 .;locus=RLOC_00009644
Chr1	stalkie_big_nohaplotig	exon	95695668	95695813	84	+	.	Parent=comp135128_c0_seq1.mrna6
Chr1	stalkie_big_nohaplotig	CDS	95695669	95695719	.	+	0	Parent=comp135128_c0_seq1.mrna6
Chr1	gffcl	locus	95799866	97274232	.	+	.	ID=RLOC_00009646;geneIDs=FBgn0261379.1.path1,comp161342_c2_seq1.path1,comp163263_c0_seq1.path1;transcripts=FBgn0261379.1.mrna1,comp163263_c0_seq1.mrna1,comp161342_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	95799866	97274232	.	+	.	ID=FBgn0261379.1.mrna1;geneID=FBgn0261379.1.path1;Name=FBgn0261379.1;Dir=sensecoverage=70.4;identity=97.1;matches=2529;mismatches=43;indels=32;unknowns=0;locus=RLOC_00009646
Chr1	stalkie_big_nohaplotig	exon	95799866	95799991	100	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 1 126 +
Chr1	stalkie_big_nohaplotig	exon	95800050	95800140	100	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 127 217 +
Chr1	stalkie_big_nohaplotig	exon	95800205	95800578	100	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 218 591 +
Chr1	stalkie_big_nohaplotig	exon	95800690	95801588	100	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 592 1490 +
Chr1	stalkie_big_nohaplotig	exon	95801695	95801798	100	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 1491 1594 +
Chr1	stalkie_big_nohaplotig	exon	95804229	95804237	100	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 1680 1688 +
Chr1	stalkie_big_nohaplotig	exon	95915223	95915228	100	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 1821 1826 +
Chr1	stalkie_big_nohaplotig	exon	95922015	95922021	100	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 1827 1833 +
Chr1	stalkie_big_nohaplotig	exon	95929538	95929544	100	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 1834 1840 +
Chr1	stalkie_big_nohaplotig	exon	95930753	95930780	56	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 1841 1879 +
Chr1	stalkie_big_nohaplotig	exon	95930957	95930963	100	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 1880 1886 +
Chr1	stalkie_big_nohaplotig	exon	95955051	95955062	100	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 1887 1898 +
Chr1	stalkie_big_nohaplotig	exon	96061857	96061866	100	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 1941 1950 +
Chr1	stalkie_big_nohaplotig	exon	96093167	96093177	90	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 1951 1961 +
Chr1	stalkie_big_nohaplotig	exon	96138298	96138358	45	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2108 2175 +
Chr1	stalkie_big_nohaplotig	exon	96138901	96138910	100	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2176 2185 +
Chr1	stalkie_big_nohaplotig	exon	96146078	96146090	100	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2186 2198 +
Chr1	stalkie_big_nohaplotig	exon	97213649	97213656	100	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2355 2362 +
Chr1	stalkie_big_nohaplotig	exon	97218966	97218971	100	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2369 2374 +
Chr1	stalkie_big_nohaplotig	exon	97225007	97225011	100	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2375 2379 +
Chr1	stalkie_big_nohaplotig	exon	97229531	97229540	80	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2380 2389 +
Chr1	stalkie_big_nohaplotig	exon	97250004	97250044	68	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2390 2421 +
Chr1	stalkie_big_nohaplotig	exon	97268941	97268942	100	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2453 2454 +
Chr1	stalkie_big_nohaplotig	exon	97269959	97269968	90	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2455 2464 +
Chr1	stalkie_big_nohaplotig	exon	97273324	97273518	100	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2465 2659 +
Chr1	stalkie_big_nohaplotig	exon	97273593	97273805	100	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2660 2872 +
Chr1	stalkie_big_nohaplotig	exon	97273853	97273983	99	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2873 3002 +
Chr1	stalkie_big_nohaplotig	exon	97274050	97274232	100	+	.	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 3003 3185 +
Chr1	stalkie_big_nohaplotig	CDS	95799866	95799991	.	+	0	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 1 126 +
Chr1	stalkie_big_nohaplotig	CDS	95800050	95800140	.	+	0	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 127 217 +
Chr1	stalkie_big_nohaplotig	CDS	95800205	95800578	.	+	2	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 218 591 +
Chr1	stalkie_big_nohaplotig	CDS	95800690	95801588	.	+	0	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 592 1490 +
Chr1	stalkie_big_nohaplotig	CDS	95801695	95801798	.	+	1	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 1491 1594 +
Chr1	stalkie_big_nohaplotig	CDS	95804229	95804237	.	+	2	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 1680 1688 +
Chr1	stalkie_big_nohaplotig	CDS	95915223	95915228	.	+	2	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 1821 1826 +
Chr1	stalkie_big_nohaplotig	CDS	95922015	95922021	.	+	2	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 1827 1833 +
Chr1	stalkie_big_nohaplotig	CDS	95929538	95929544	.	+	1	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 1834 1840 +
Chr1	stalkie_big_nohaplotig	CDS	95930753	95930780	.	+	0	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 1841 1879 +
Chr1	stalkie_big_nohaplotig	CDS	95930957	95930963	.	+	2	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 1880 1886 +
Chr1	stalkie_big_nohaplotig	CDS	95955051	95955062	.	+	1	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 1887 1898 +
Chr1	stalkie_big_nohaplotig	CDS	96061857	96061866	.	+	1	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 1941 1950 +
Chr1	stalkie_big_nohaplotig	CDS	96093167	96093177	.	+	0	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 1951 1961 +
Chr1	stalkie_big_nohaplotig	CDS	96138298	96138358	.	+	1	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2108 2175 +
Chr1	stalkie_big_nohaplotig	CDS	96138901	96138910	.	+	0	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2176 2185 +
Chr1	stalkie_big_nohaplotig	CDS	96146078	96146090	.	+	2	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2186 2198 +
Chr1	stalkie_big_nohaplotig	CDS	97213649	97213656	.	+	1	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2355 2362 +
Chr1	stalkie_big_nohaplotig	CDS	97218966	97218971	.	+	2	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2369 2374 +
Chr1	stalkie_big_nohaplotig	CDS	97225007	97225011	.	+	2	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2375 2379 +
Chr1	stalkie_big_nohaplotig	CDS	97229531	97229540	.	+	0	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2380 2389 +
Chr1	stalkie_big_nohaplotig	CDS	97250004	97250044	.	+	2	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2390 2421 +
Chr1	stalkie_big_nohaplotig	CDS	97268941	97268942	.	+	0	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2453 2454 +
Chr1	stalkie_big_nohaplotig	CDS	97269959	97269968	.	+	1	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2455 2464 +
Chr1	stalkie_big_nohaplotig	CDS	97273324	97273518	.	+	0	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2465 2659 +
Chr1	stalkie_big_nohaplotig	CDS	97273593	97273805	.	+	0	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2660 2872 +
Chr1	stalkie_big_nohaplotig	CDS	97273853	97273983	.	+	0	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 2873 3002 +
Chr1	stalkie_big_nohaplotig	CDS	97274050	97274230	.	+	1	Parent=FBgn0261379.1.mrna1;Target=FBgn0261379.1 3003 3183 +
Chr1	stalkie_big_nohaplotig	mRNA	95856454	96112283	.	+	.	ID=comp163263_c0_seq1.mrna1;geneID=comp163263_c0_seq1.path1;Name=comp163263_c0_seq1;Dir=antisensecoverage=46.6;identity=97.2;matches=2891;mismatches=55;indels=28;unknowns=0;Target=comp163263_c0_seq1 5892 6038 .;locus=RLOC_00009646
Chr1	stalkie_big_nohaplotig	exon	95856454	95859080	98	+	.	Parent=comp163263_c0_seq1.mrna1;Target=comp163263_c0_seq1 3739 6374 -
Chr1	stalkie_big_nohaplotig	exon	95958423	95958433	100	+	.	Parent=comp163263_c0_seq1.mrna1;Target=comp163263_c0_seq1 3714 3724 -
Chr1	stalkie_big_nohaplotig	exon	95960289	95960381	88	+	.	Parent=comp163263_c0_seq1.mrna1;Target=comp163263_c0_seq1 3621 3713 -
Chr1	stalkie_big_nohaplotig	exon	95974069	95974072	100	+	.	Parent=comp163263_c0_seq1.mrna1;Target=comp163263_c0_seq1 3617 3620 -
Chr1	stalkie_big_nohaplotig	exon	95989050	95989057	100	+	.	Parent=comp163263_c0_seq1.mrna1;Target=comp163263_c0_seq1 3609 3616 -
Chr1	stalkie_big_nohaplotig	exon	95997065	95997073	100	+	.	Parent=comp163263_c0_seq1.mrna1;Target=comp163263_c0_seq1 3600 3608 -
Chr1	stalkie_big_nohaplotig	exon	96014403	96014428	65	+	.	Parent=comp163263_c0_seq1.mrna1;Target=comp163263_c0_seq1 3580 3599 -
Chr1	stalkie_big_nohaplotig	exon	96046181	96046183	100	+	.	Parent=comp163263_c0_seq1.mrna1;Target=comp163263_c0_seq1 3577 3579 -
Chr1	stalkie_big_nohaplotig	exon	96061865	96061868	75	+	.	Parent=comp163263_c0_seq1.mrna1;Target=comp163263_c0_seq1 3573 3576 -
Chr1	stalkie_big_nohaplotig	exon	96064436	96064442	85	+	.	Parent=comp163263_c0_seq1.mrna1;Target=comp163263_c0_seq1 3566 3572 -
Chr1	stalkie_big_nohaplotig	exon	96071882	96071889	100	+	.	Parent=comp163263_c0_seq1.mrna1;Target=comp163263_c0_seq1 3558 3565 -
Chr1	stalkie_big_nohaplotig	exon	96112122	96112283	81	+	.	Parent=comp163263_c0_seq1.mrna1;Target=comp163263_c0_seq1 3405 3557 -
Chr1	stalkie_big_nohaplotig	CDS	95856790	95856936	.	+	0	Parent=comp163263_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	95984193	95997136	.	+	.	ID=comp161342_c2_seq1.mrna1;geneID=comp161342_c2_seq1.path1;Name=comp161342_c2_seq1;Dir=indeterminatecoverage=93.1;identity=94.8;matches=474;mismatches=26;indels=0;unknowns=0;Target=comp161342_c2_seq1 534 43 .;locus=RLOC_00009646
Chr1	stalkie_big_nohaplotig	exon	95984193	95984199	100	+	.	Parent=comp161342_c2_seq1.mrna1;Target=comp161342_c2_seq1 42 36 .
Chr1	stalkie_big_nohaplotig	exon	95996644	95997136	94	+	.	Parent=comp161342_c2_seq1.mrna1;Target=comp161342_c2_seq1 535 43 .
Chr1	stalkie_big_nohaplotig	CDS	95996644	95997135	.	+	0	Parent=comp161342_c2_seq1.mrna1
Chr1	gffcl	locus	95845651	96113172	.	-	.	ID=RLOC_00009648;geneIDs=comp161523_c0_seq1.path1;transcripts=comp161523_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	95845651	96113172	.	-	.	ID=comp161523_c0_seq1.mrna1;geneID=comp161523_c0_seq1.path1;Name=comp161523_c0_seq1;Dir=indeterminatecoverage=93.6;identity=88.9;matches=1013;mismatches=65;indels=61;unknowns=0;Target=comp161523_c0_seq1 112 2 .;locus=RLOC_00009648
Chr1	stalkie_big_nohaplotig	exon	95845651	95845669	84	-	.	Parent=comp161523_c0_seq1.mrna1;Target=comp161523_c0_seq1 1137 1119 .
Chr1	stalkie_big_nohaplotig	exon	95851175	95851180	100	-	.	Parent=comp161523_c0_seq1.mrna1;Target=comp161523_c0_seq1 1118 1113 .
Chr1	stalkie_big_nohaplotig	exon	95853408	95853414	100	-	.	Parent=comp161523_c0_seq1.mrna1;Target=comp161523_c0_seq1 1112 1106 .
Chr1	stalkie_big_nohaplotig	exon	95859174	95859206	90	-	.	Parent=comp161523_c0_seq1.mrna1;Target=comp161523_c0_seq1 1105 1073 .
Chr1	stalkie_big_nohaplotig	exon	95960390	95961142	88	-	.	Parent=comp161523_c0_seq1.mrna1;Target=comp161523_c0_seq1 1072 265 .
Chr1	stalkie_big_nohaplotig	exon	96112854	96113001	90	-	.	Parent=comp161523_c0_seq1.mrna1;Target=comp161523_c0_seq1 263 116 .
Chr1	stalkie_big_nohaplotig	exon	96113058	96113172	92	-	.	Parent=comp161523_c0_seq1.mrna1;Target=comp161523_c0_seq1 115 1 .
Chr1	stalkie_big_nohaplotig	CDS	96113061	96113171	.	-	0	Parent=comp161523_c0_seq1.mrna1
Chr1	gffcl	locus	95860121	95860526	.	+	.	ID=RLOC_00009649;geneIDs=comp143606_c0_seq1.path1;transcripts=comp143606_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	95860121	95860526	.	+	.	ID=comp143606_c0_seq1.mrna1;geneID=comp143606_c0_seq1.path1;Name=comp143606_c0_seq1;Dir=indeterminatecoverage=95.3;identity=98.0;matches=398;mismatches=8;indels=0;unknowns=0;Target=comp143606_c0_seq1 426 21 .;CDS_Target=comp143606_c0_seq1 28 23 .;locus=RLOC_00009649
Chr1	stalkie_big_nohaplotig	exon	95860121	95860526	98	+	.	Parent=comp143606_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	95860123	95860128	.	+	0	Parent=comp143606_c0_seq1.mrna1
Chr1	gffcl	locus	95862046	95922707	.	-	.	ID=RLOC_00009650;geneIDs=FBgn0086675.1.path1;transcripts=FBgn0086675.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	95862046	95922707	.	-	.	ID=FBgn0086675.1.mrna1;geneID=FBgn0086675.1.path1;Name=FBgn0086675.1;Dir=sensecoverage=52.9;identity=100.0;matches=586;mismatches=0;indels=0;unknowns=0;Target=FBgn0086675.1 537 545 +;locus=RLOC_00009650
Chr1	stalkie_big_nohaplotig	exon	95862046	95862367	100	-	.	Parent=FBgn0086675.1.mrna1;Target=FBgn0086675.1 816 1137 +
Chr1	stalkie_big_nohaplotig	exon	95891243	95891487	100	-	.	Parent=FBgn0086675.1.mrna1;Target=FBgn0086675.1 571 815 +
Chr1	stalkie_big_nohaplotig	exon	95902939	95902943	100	-	.	Parent=FBgn0086675.1.mrna1;Target=FBgn0086675.1 566 570 +
Chr1	stalkie_big_nohaplotig	exon	95908969	95908972	100	-	.	Parent=FBgn0086675.1.mrna1;Target=FBgn0086675.1 562 565 +
Chr1	stalkie_big_nohaplotig	exon	95922698	95922707	100	-	.	Parent=FBgn0086675.1.mrna1;Target=FBgn0086675.1 536 545 +
Chr1	stalkie_big_nohaplotig	CDS	95922698	95922706	.	-	0	Parent=FBgn0086675.1.mrna1
Chr1	gffcl	locus	95986087	96158456	.	-	.	ID=RLOC_00009652;geneIDs=comp163691_c0_seq1.path1;transcripts=comp163691_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	95986087	96158456	.	-	.	ID=comp163691_c0_seq1.mrna1;geneID=comp163691_c0_seq1.path1;Name=comp163691_c0_seq1;Dir=antisensecoverage=85.3;identity=91.9;matches=1467;mismatches=75;indels=55;unknowns=0;Target=comp163691_c0_seq1 7 468 .;locus=RLOC_00009652
Chr1	stalkie_big_nohaplotig	exon	95986087	95986663	91	-	.	Parent=comp163691_c0_seq1.mrna1;Target=comp163691_c0_seq1 5 590 -
Chr1	stalkie_big_nohaplotig	exon	96038329	96038332	100	-	.	Parent=comp163691_c0_seq1.mrna1;Target=comp163691_c0_seq1 591 594 -
Chr1	stalkie_big_nohaplotig	exon	96157496	96158456	91	-	.	Parent=comp163691_c0_seq1.mrna1;Target=comp163691_c0_seq1 595 1601 -
Chr1	stalkie_big_nohaplotig	CDS	95986089	95986550	.	-	0	Parent=comp163691_c0_seq1.mrna1
Chr1	gffcl	locus	96048741	96049991	.	+	.	ID=RLOC_00009654;geneIDs=Dp_FBgn0243606.path8;transcripts=Dp_FBgn0243606.mrna8
Chr1	stalkie_big_nohaplotig	mRNA	96048741	96049991	.	+	.	ID=Dp_FBgn0243606.mrna8;geneID=Dp_FBgn0243606.path8;Name=Dp_FBgn0243606;Dir=indeterminatecoverage=100.0;identity=98.6;matches=1229;mismatches=17;indels=0;unknowns=5;Target=Dp_FBgn0243606 1251 1 .;locus=RLOC_00009654
Chr1	stalkie_big_nohaplotig	exon	96048741	96049991	98	+	.	Parent=Dp_FBgn0243606.mrna8
Chr1	stalkie_big_nohaplotig	CDS	96048741	96049991	.	+	0	Parent=Dp_FBgn0243606.mrna8
Chr1	gffcl	locus	96195977	96196308	.	+	.	ID=RLOC_00009656;geneIDs=comp51719_c0_seq1.path1;transcripts=comp51719_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	96195977	96196308	.	+	.	ID=comp51719_c0_seq1.mrna1;geneID=comp51719_c0_seq1.path1;Name=comp51719_c0_seq1;Dir=indeterminatecoverage=54.4;identity=100.0;matches=332;mismatches=0;indels=0;unknowns=0;Target=comp51719_c0_seq1 610 279 .;CDS_Target=comp51719_c0_seq1 337 281 .;locus=RLOC_00009656
Chr1	stalkie_big_nohaplotig	exon	96195977	96196308	100	+	.	Parent=comp51719_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	96195979	96196035	.	+	0	Parent=comp51719_c0_seq1.mrna1
Chr1	gffcl	locus	96216535	96216852	.	-	.	ID=RLOC_00009657;geneIDs=Dp_FBgn0250085.path3;transcripts=Dp_FBgn0250085.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	96216535	96216852	.	-	.	ID=Dp_FBgn0250085.mrna3;geneID=Dp_FBgn0250085.path3;Name=Dp_FBgn0250085;Dir=indeterminatecoverage=100.0;identity=100.0;matches=318;mismatches=0;indels=0;unknowns=0;Target=Dp_FBgn0250085 318 1 .;locus=RLOC_00009657
Chr1	stalkie_big_nohaplotig	exon	96216535	96216852	100	-	.	Parent=Dp_FBgn0250085.mrna3
Chr1	stalkie_big_nohaplotig	CDS	96216535	96216852	.	-	0	Parent=Dp_FBgn0250085.mrna3
Chr1	gffcl	locus	96350544	96351422	.	+	.	ID=RLOC_00009658;geneIDs=comp1107098_c0_seq1.path1;transcripts=comp1107098_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	96350544	96351422	.	+	.	ID=comp1107098_c0_seq1.mrna1;geneID=comp1107098_c0_seq1.path1;Name=comp1107098_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.8;matches=872;mismatches=3;indels=8;unknowns=0;Target=comp1107098_c0_seq1 881 3 .;CDS_Target=comp1107098_c0_seq1 879 595 .;locus=RLOC_00009658
Chr1	stalkie_big_nohaplotig	exon	96350544	96351422	98	+	.	Parent=comp1107098_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	96351136	96351420	.	+	0	Parent=comp1107098_c0_seq1.mrna1
Chr1	gffcl	locus	96356834	96358272	.	-	.	ID=RLOC_00009659;geneIDs=FBgn0029158.1.path1;transcripts=FBgn0029158.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	96356834	96358272	.	-	.	ID=FBgn0029158.1.mrna1;geneID=FBgn0029158.1.path1;Name=FBgn0029158.1;Dir=sensecoverage=100.0;identity=100.0;matches=1143;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009659
Chr1	stalkie_big_nohaplotig	exon	96356834	96357347	100	-	.	Parent=FBgn0029158.1.mrna1;Target=FBgn0029158.1 630 1143 +
Chr1	stalkie_big_nohaplotig	exon	96357434	96357491	100	-	.	Parent=FBgn0029158.1.mrna1;Target=FBgn0029158.1 572 629 +
Chr1	stalkie_big_nohaplotig	exon	96357551	96357707	100	-	.	Parent=FBgn0029158.1.mrna1;Target=FBgn0029158.1 415 571 +
Chr1	stalkie_big_nohaplotig	exon	96357804	96358169	100	-	.	Parent=FBgn0029158.1.mrna1;Target=FBgn0029158.1 49 414 +
Chr1	stalkie_big_nohaplotig	exon	96358225	96358272	100	-	.	Parent=FBgn0029158.1.mrna1;Target=FBgn0029158.1 1 48 +
Chr1	stalkie_big_nohaplotig	CDS	96356834	96357347	.	-	1	Parent=FBgn0029158.1.mrna1;Target=FBgn0029158.1 630 1143 +
Chr1	stalkie_big_nohaplotig	CDS	96357434	96357491	.	-	2	Parent=FBgn0029158.1.mrna1;Target=FBgn0029158.1 572 629 +
Chr1	stalkie_big_nohaplotig	CDS	96357551	96357707	.	-	0	Parent=FBgn0029158.1.mrna1;Target=FBgn0029158.1 415 571 +
Chr1	stalkie_big_nohaplotig	CDS	96357804	96358169	.	-	0	Parent=FBgn0029158.1.mrna1;Target=FBgn0029158.1 49 414 +
Chr1	stalkie_big_nohaplotig	CDS	96358225	96358272	.	-	0	Parent=FBgn0029158.1.mrna1;Target=FBgn0029158.1 1 48 +
Chr1	gffcl	locus	96367432	96368685	.	+	.	ID=RLOC_00009660;geneIDs=comp140584_c0_seq1.path1;transcripts=comp140584_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	96367432	96368685	.	+	.	ID=comp140584_c0_seq1.mrna1;geneID=comp140584_c0_seq1.path1;Name=comp140584_c0_seq1;Dir=indeterminatecoverage=93.0;identity=99.9;matches=1253;mismatches=1;indels=0;unknowns=0;Target=comp140584_c0_seq1 1254 1 .;CDS_Target=comp140584_c0_seq1 806 594 .;locus=RLOC_00009660
Chr1	stalkie_big_nohaplotig	exon	96367432	96368685	99	+	.	Parent=comp140584_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	96368025	96368237	.	+	0	Parent=comp140584_c0_seq1.mrna1
Chr1	gffcl	locus	96459488	96460309	.	-	.	ID=RLOC_00009661;geneIDs=comp145878_c0_seq1.path1;transcripts=comp145878_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	96459488	96460309	.	-	.	ID=comp145878_c0_seq1.mrna1;geneID=comp145878_c0_seq1.path1;Name=comp145878_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=720;mismatches=0;indels=1;unknowns=0;Target=comp145878_c0_seq1 25 219 +;locus=RLOC_00009661
Chr1	stalkie_big_nohaplotig	exon	96459488	96459511	100	-	.	Parent=comp145878_c0_seq1.mrna1;Target=comp145878_c0_seq1 698 721 +
Chr1	stalkie_big_nohaplotig	exon	96459614	96460309	99	-	.	Parent=comp145878_c0_seq1.mrna1;Target=comp145878_c0_seq1 1 697 +
Chr1	stalkie_big_nohaplotig	CDS	96460092	96460286	.	-	0	Parent=comp145878_c0_seq1.mrna1
Chr1	gffcl	locus	96566320	96568161	.	-	.	ID=RLOC_00009662;geneIDs=comp154718_c3_seq1.path1;transcripts=comp154718_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	96566320	96568161	.	-	.	ID=comp154718_c3_seq1.mrna1;geneID=comp154718_c3_seq1.path1;Name=comp154718_c3_seq1;Dir=indeterminatecoverage=100.0;identity=96.8;matches=1793;mismatches=49;indels=10;unknowns=0;Target=comp154718_c3_seq1 1852 1 .;CDS_Target=comp154718_c3_seq1 723 424 .;locus=RLOC_00009662
Chr1	stalkie_big_nohaplotig	exon	96566320	96568161	96	-	.	Parent=comp154718_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	96567440	96567739	.	-	0	Parent=comp154718_c3_seq1.mrna1
Chr1	gffcl	locus	96601022	96602672	.	+	.	ID=RLOC_00009663;geneIDs=FBgn0014179.1.path1;transcripts=FBgn0014179.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	96601022	96602672	.	+	.	ID=FBgn0014179.1.mrna1;geneID=FBgn0014179.1.path1;Name=FBgn0014179.1;Dir=sensecoverage=100.0;identity=99.9;matches=1528;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009663
Chr1	stalkie_big_nohaplotig	exon	96601022	96601045	100	+	.	Parent=FBgn0014179.1.mrna1;Target=FBgn0014179.1 1 24 +
Chr1	stalkie_big_nohaplotig	exon	96601103	96601440	100	+	.	Parent=FBgn0014179.1.mrna1;Target=FBgn0014179.1 25 362 +
Chr1	stalkie_big_nohaplotig	exon	96601505	96602672	99	+	.	Parent=FBgn0014179.1.mrna1;Target=FBgn0014179.1 363 1530 +
Chr1	stalkie_big_nohaplotig	CDS	96601022	96601045	.	+	0	Parent=FBgn0014179.1.mrna1;Target=FBgn0014179.1 1 24 +
Chr1	stalkie_big_nohaplotig	CDS	96601103	96601440	.	+	0	Parent=FBgn0014179.1.mrna1;Target=FBgn0014179.1 25 362 +
Chr1	stalkie_big_nohaplotig	CDS	96601505	96602672	.	+	1	Parent=FBgn0014179.1.mrna1;Target=FBgn0014179.1 363 1530 +
Chr1	gffcl	locus	96632722	97144114	.	+	.	ID=RLOC_00009664;geneIDs=FBgn0030437.1.path1;transcripts=FBgn0030437.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	96632722	97144114	.	+	.	ID=FBgn0030437.1.mrna1;geneID=FBgn0030437.1.path1;Name=FBgn0030437.1;Dir=sensecoverage=100.0;identity=95.3;matches=1228;mismatches=31;indels=30;unknowns=0;locus=RLOC_00009664
Chr1	stalkie_big_nohaplotig	exon	96632722	96632872	100	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 1 151 +
Chr1	stalkie_big_nohaplotig	exon	96632941	96633253	99	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 152 464 +
Chr1	stalkie_big_nohaplotig	exon	96672046	96672055	90	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 465 474 +
Chr1	stalkie_big_nohaplotig	exon	96702449	96702497	56	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 541 583 +
Chr1	stalkie_big_nohaplotig	exon	96926893	96926900	100	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 621 628 +
Chr1	stalkie_big_nohaplotig	exon	96933574	96933583	90	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 629 639 +
Chr1	stalkie_big_nohaplotig	exon	96933594	96933595	100	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 683 684 +
Chr1	stalkie_big_nohaplotig	exon	96940998	96940999	100	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 685 686 +
Chr1	stalkie_big_nohaplotig	exon	96942593	96942603	100	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 687 697 +
Chr1	stalkie_big_nohaplotig	exon	97026152	97026154	100	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 698 700 +
Chr1	stalkie_big_nohaplotig	exon	97038098	97038117	51	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 701 735 +
Chr1	stalkie_big_nohaplotig	exon	97042013	97042018	100	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 736 741 +
Chr1	stalkie_big_nohaplotig	exon	97058091	97058101	90	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 742 752 +
Chr1	stalkie_big_nohaplotig	exon	97067083	97067086	75	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 753 756 +
Chr1	stalkie_big_nohaplotig	exon	97074405	97074407	100	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 757 759 +
Chr1	stalkie_big_nohaplotig	exon	97083824	97083849	71	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 760 786 +
Chr1	stalkie_big_nohaplotig	exon	97088579	97088580	100	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 787 788 +
Chr1	stalkie_big_nohaplotig	exon	97095613	97095623	100	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 789 799 +
Chr1	stalkie_big_nohaplotig	exon	97103132	97103145	75	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 821 836 +
Chr1	stalkie_big_nohaplotig	exon	97110260	97110273	71	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 837 849 +
Chr1	stalkie_big_nohaplotig	exon	97115953	97115964	91	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 850 861 +
Chr1	stalkie_big_nohaplotig	exon	97119671	97119674	100	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 862 865 +
Chr1	stalkie_big_nohaplotig	exon	97120883	97120887	100	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 866 870 +
Chr1	stalkie_big_nohaplotig	exon	97125572	97125575	100	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 871 874 +
Chr1	stalkie_big_nohaplotig	exon	97128245	97128246	100	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 875 876 +
Chr1	stalkie_big_nohaplotig	exon	97143338	97143456	100	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 877 995 +
Chr1	stalkie_big_nohaplotig	exon	97143521	97143594	100	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 996 1069 +
Chr1	stalkie_big_nohaplotig	exon	97143655	97143761	100	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 1070 1176 +
Chr1	stalkie_big_nohaplotig	exon	97143845	97144114	100	+	.	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 1177 1446 +
Chr1	stalkie_big_nohaplotig	CDS	96632722	96632872	.	+	0	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 1 151 +
Chr1	stalkie_big_nohaplotig	CDS	96632941	96633253	.	+	2	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 152 464 +
Chr1	stalkie_big_nohaplotig	CDS	96672046	96672055	.	+	1	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 465 474 +
Chr1	stalkie_big_nohaplotig	CDS	96702449	96702497	.	+	0	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 541 583 +
Chr1	stalkie_big_nohaplotig	CDS	96926893	96926900	.	+	2	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 621 628 +
Chr1	stalkie_big_nohaplotig	CDS	96933574	96933583	.	+	0	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 629 639 +
Chr1	stalkie_big_nohaplotig	CDS	96933594	96933595	.	+	2	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 683 684 +
Chr1	stalkie_big_nohaplotig	CDS	96940998	96940999	.	+	0	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 685 686 +
Chr1	stalkie_big_nohaplotig	CDS	96942593	96942603	.	+	1	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 687 697 +
Chr1	stalkie_big_nohaplotig	CDS	97026152	97026154	.	+	2	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 698 700 +
Chr1	stalkie_big_nohaplotig	CDS	97038098	97038117	.	+	2	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 701 735 +
Chr1	stalkie_big_nohaplotig	CDS	97042013	97042018	.	+	0	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 736 741 +
Chr1	stalkie_big_nohaplotig	CDS	97058091	97058101	.	+	0	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 742 752 +
Chr1	stalkie_big_nohaplotig	CDS	97067083	97067086	.	+	1	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 753 756 +
Chr1	stalkie_big_nohaplotig	CDS	97074405	97074407	.	+	0	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 757 759 +
Chr1	stalkie_big_nohaplotig	CDS	97083824	97083849	.	+	0	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 760 786 +
Chr1	stalkie_big_nohaplotig	CDS	97088579	97088580	.	+	1	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 787 788 +
Chr1	stalkie_big_nohaplotig	CDS	97095613	97095623	.	+	2	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 789 799 +
Chr1	stalkie_big_nohaplotig	CDS	97103132	97103145	.	+	0	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 821 836 +
Chr1	stalkie_big_nohaplotig	CDS	97110260	97110273	.	+	1	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 837 849 +
Chr1	stalkie_big_nohaplotig	CDS	97115953	97115964	.	+	2	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 850 861 +
Chr1	stalkie_big_nohaplotig	CDS	97119671	97119674	.	+	2	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 862 865 +
Chr1	stalkie_big_nohaplotig	CDS	97120883	97120887	.	+	1	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 866 870 +
Chr1	stalkie_big_nohaplotig	CDS	97125572	97125575	.	+	2	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 871 874 +
Chr1	stalkie_big_nohaplotig	CDS	97128245	97128246	.	+	1	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 875 876 +
Chr1	stalkie_big_nohaplotig	CDS	97143338	97143456	.	+	2	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 877 995 +
Chr1	stalkie_big_nohaplotig	CDS	97143521	97143594	.	+	0	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 996 1069 +
Chr1	stalkie_big_nohaplotig	CDS	97143655	97143761	.	+	1	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 1070 1176 +
Chr1	stalkie_big_nohaplotig	CDS	97143845	97144114	.	+	2	Parent=FBgn0030437.1.mrna1;Target=FBgn0030437.1 1177 1446 +
Chr1	gffcl	locus	96665952	96667026	.	-	.	ID=RLOC_00009665;geneIDs=comp156706_c0_seq1.path1;transcripts=comp156706_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	96665952	96667026	.	-	.	ID=comp156706_c0_seq1.mrna1;geneID=comp156706_c0_seq1.path1;Name=comp156706_c0_seq1;Dir=sensecoverage=100.0;identity=96.5;matches=971;mismatches=29;indels=6;unknowns=0;Target=comp156706_c0_seq1 299 853 +;locus=RLOC_00009665
Chr1	stalkie_big_nohaplotig	exon	96665952	96666829	97	-	.	Parent=comp156706_c0_seq1.mrna1;Target=comp156706_c0_seq1 123 1000 +
Chr1	stalkie_big_nohaplotig	exon	96666899	96667026	90	-	.	Parent=comp156706_c0_seq1.mrna1;Target=comp156706_c0_seq1 1 122 +
Chr1	stalkie_big_nohaplotig	CDS	96666099	96666653	.	-	0	Parent=comp156706_c0_seq1.mrna1
Chr1	gffcl	locus	96669997	96673207	.	+	.	ID=RLOC_00009666;geneIDs=comp163678_c0_seq1.path2;transcripts=comp163678_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	96669997	96673207	.	+	.	ID=comp163678_c0_seq1.mrna2;geneID=comp163678_c0_seq1.path2;Name=comp163678_c0_seq1;Dir=antisensecoverage=100.0;identity=96.3;matches=776;mismatches=24;indels=6;unknowns=0;locus=RLOC_00009666
Chr1	stalkie_big_nohaplotig	exon	96669997	96670258	97	+	.	Parent=comp163678_c0_seq1.mrna2;Target=comp163678_c0_seq1 541 802 -
Chr1	stalkie_big_nohaplotig	exon	96671569	96671693	94	+	.	Parent=comp163678_c0_seq1.mrna2;Target=comp163678_c0_seq1 415 540 -
Chr1	stalkie_big_nohaplotig	exon	96671760	96671909	94	+	.	Parent=comp163678_c0_seq1.mrna2;Target=comp163678_c0_seq1 265 414 -
Chr1	stalkie_big_nohaplotig	exon	96672941	96673207	97	+	.	Parent=comp163678_c0_seq1.mrna2;Target=comp163678_c0_seq1 1 264 -
Chr1	stalkie_big_nohaplotig	CDS	96670168	96670258	.	+	0	Parent=comp163678_c0_seq1.mrna2;Target=comp163678_c0_seq1 541 631 .
Chr1	stalkie_big_nohaplotig	CDS	96671569	96671608	.	+	2	Parent=comp163678_c0_seq1.mrna2;Target=comp163678_c0_seq1 500 540 .
Chr1	gffcl	locus	96679870	96680672	.	+	.	ID=RLOC_00009669;geneIDs=comp163719_c3_seq1.path1;transcripts=comp163719_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	96679870	96680672	.	+	.	ID=comp163719_c3_seq1.mrna1;geneID=comp163719_c3_seq1.path1;Name=comp163719_c3_seq1;Dir=indeterminatecoverage=99.4;identity=94.2;matches=776;mismatches=27;indels=21;unknowns=0;Target=comp163719_c3_seq1 829 6 .;CDS_Target=comp163719_c3_seq1 488 315 .;locus=RLOC_00009669
Chr1	stalkie_big_nohaplotig	exon	96679870	96680672	94	+	.	Parent=comp163719_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	96680179	96680352	.	+	0	Parent=comp163719_c3_seq1.mrna1
Chr1	gffcl	locus	96681942	96683077	.	-	.	ID=RLOC_00009670;geneIDs=comp159828_c3_seq1.path1;transcripts=comp159828_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	96681942	96683077	.	-	.	ID=comp159828_c3_seq1.mrna1;geneID=comp159828_c3_seq1.path1;Name=comp159828_c3_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=1115;mismatches=21;indels=1;unknowns=0;Target=comp159828_c3_seq1 1137 1 .;CDS_Target=comp159828_c3_seq1 1098 754 .;locus=RLOC_00009670
Chr1	stalkie_big_nohaplotig	exon	96681942	96683077	98	-	.	Parent=comp159828_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	96681981	96682325	.	-	0	Parent=comp159828_c3_seq1.mrna1
Chr1	gffcl	locus	96741980	96743920	.	-	.	ID=RLOC_00009671;geneIDs=comp163611_c0_seq1.path5;transcripts=comp163611_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	96741980	96743920	.	-	.	ID=comp163611_c0_seq1.mrna5;geneID=comp163611_c0_seq1.path5;Name=comp163611_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1933;mismatches=8;indels=0;unknowns=0;Target=comp163611_c0_seq1 1941 1 .;locus=RLOC_00009671
Chr1	stalkie_big_nohaplotig	exon	96741980	96743920	99	-	.	Parent=comp163611_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	96741980	96743920	.	-	0	Parent=comp163611_c0_seq1.mrna5
Chr1	gffcl	locus	96745676	96746486	.	-	.	ID=RLOC_00009672;geneIDs=comp163913_c0_seq1.path1;transcripts=comp163913_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	96745676	96746486	.	-	.	ID=comp163913_c0_seq1.mrna1;geneID=comp163913_c0_seq1.path1;Name=comp163913_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=771;mismatches=9;indels=0;unknowns=0;Target=comp163913_c0_seq1 373 2 .;locus=RLOC_00009672
Chr1	stalkie_big_nohaplotig	exon	96745676	96745916	97	-	.	Parent=comp163913_c0_seq1.mrna1;Target=comp163913_c0_seq1 780 540 .
Chr1	stalkie_big_nohaplotig	exon	96745948	96746486	99	-	.	Parent=comp163913_c0_seq1.mrna1;Target=comp163913_c0_seq1 539 1 .
Chr1	stalkie_big_nohaplotig	CDS	96746114	96746485	.	-	0	Parent=comp163913_c0_seq1.mrna1
Chr1	gffcl	locus	96767576	96771826	.	.	.	ID=RLOC_00009673;geneIDs=Dp_FBgn0250556.1.path1,comp162691_c4_seq1.path2;transcripts=comp162691_c4_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	96767576	96771826	.	-	.	ID=comp162691_c4_seq1.mrna2;geneID=comp162691_c4_seq1.path2;Name=comp162691_c4_seq1;Dir=indeterminatecoverage=83.8;identity=91.3;matches=1437;mismatches=110;indels=27;unknowns=0;Target=comp162691_c4_seq1 1899 1621 .;locus=RLOC_00009673
Chr1	stalkie_big_nohaplotig	exon	96767576	96768377	92	-	.	Parent=comp162691_c4_seq1.mrna2;Target=comp162691_c4_seq1 1900 1099 .
Chr1	stalkie_big_nohaplotig	exon	96768685	96768691	100	-	.	Parent=comp162691_c4_seq1.mrna2;Target=comp162691_c4_seq1 1098 1092 .
Chr1	stalkie_big_nohaplotig	exon	96770469	96770480	100	-	.	Parent=comp162691_c4_seq1.mrna2;Target=comp162691_c4_seq1 1084 1073 .
Chr1	stalkie_big_nohaplotig	exon	96770512	96770993	89	-	.	Parent=comp162691_c4_seq1.mrna2;Target=comp162691_c4_seq1 1060 556 .
Chr1	stalkie_big_nohaplotig	exon	96771583	96771826	88	-	.	Parent=comp162691_c4_seq1.mrna2;Target=comp162691_c4_seq1 555 308 .
Chr1	stalkie_big_nohaplotig	CDS	96767577	96767855	.	-	0	Parent=comp162691_c4_seq1.mrna2
Chr1	gffcl	locus	96791539	96791929	.	+	.	ID=RLOC_00009674;geneIDs=Dp_FBgn0245446.path4;transcripts=Dp_FBgn0245446.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	96791539	96791929	.	+	.	ID=Dp_FBgn0245446.mrna4;geneID=Dp_FBgn0245446.path4;Name=Dp_FBgn0245446;Dir=indeterminatecoverage=100.0;identity=85.7;matches=335;mismatches=22;indels=34;unknowns=0;Target=Dp_FBgn0245446 357 1 .;locus=RLOC_00009674
Chr1	stalkie_big_nohaplotig	exon	96791539	96791929	85	+	.	Parent=Dp_FBgn0245446.mrna4
Chr1	stalkie_big_nohaplotig	CDS	96791539	96791929	.	+	0	Parent=Dp_FBgn0245446.mrna4
Chr1	gffcl	locus	96807972	96808865	.	+	.	ID=RLOC_00009675;geneIDs=ORF2236.path2;transcripts=ORF2236.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	96807972	96808865	.	+	.	ID=ORF2236.mrna2;geneID=ORF2236.path2;Name=ORF2236;Dir=indeterminatecoverage=100.0;identity=97.7;matches=873;mismatches=21;indels=0;unknowns=0;Target=ORF2236 894 1 .;locus=RLOC_00009675
Chr1	stalkie_big_nohaplotig	exon	96807972	96808865	97	+	.	Parent=ORF2236.mrna2
Chr1	stalkie_big_nohaplotig	CDS	96807972	96808865	.	+	0	Parent=ORF2236.mrna2
Chr1	gffcl	locus	96861822	96862520	.	+	.	ID=RLOC_00009676;geneIDs=Dv_FBgn0209813.1.path3;transcripts=Dv_FBgn0209813.1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	96861822	96862520	.	+	.	ID=Dv_FBgn0209813.1.mrna3;geneID=Dv_FBgn0209813.1.path3;Name=Dv_FBgn0209813.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=697;mismatches=2;indels=0;unknowns=0;Target=Dv_FBgn0209813.1 699 1 .;locus=RLOC_00009676
Chr1	stalkie_big_nohaplotig	exon	96861822	96862520	99	+	.	Parent=Dv_FBgn0209813.1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	96861822	96862520	.	+	0	Parent=Dv_FBgn0209813.1.mrna3
Chr1	gffcl	locus	96863321	96864453	.	-	.	ID=RLOC_00009677;geneIDs=comp163325_c0_seq1.path6;transcripts=comp163325_c0_seq1.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	96863321	96864453	.	-	.	ID=comp163325_c0_seq1.mrna6;geneID=comp163325_c0_seq1.path6;Name=comp163325_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1130;mismatches=3;indels=0;unknowns=0;Target=comp163325_c0_seq1 1133 1 .;CDS_Target=comp163325_c0_seq1 255 1 .;locus=RLOC_00009677
Chr1	stalkie_big_nohaplotig	exon	96863321	96864453	99	-	.	Parent=comp163325_c0_seq1.mrna6
Chr1	stalkie_big_nohaplotig	CDS	96864199	96864453	.	-	0	Parent=comp163325_c0_seq1.mrna6
Chr1	gffcl	locus	96881576	96882708	.	+	.	ID=RLOC_00009678;geneIDs=comp163325_c0_seq1.path7;transcripts=comp163325_c0_seq1.mrna7
Chr1	stalkie_big_nohaplotig	mRNA	96881576	96882708	.	+	.	ID=comp163325_c0_seq1.mrna7;geneID=comp163325_c0_seq1.path7;Name=comp163325_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1130;mismatches=3;indels=0;unknowns=0;Target=comp163325_c0_seq1 1133 1 .;CDS_Target=comp163325_c0_seq1 255 1 .;locus=RLOC_00009678
Chr1	stalkie_big_nohaplotig	exon	96881576	96882708	99	+	.	Parent=comp163325_c0_seq1.mrna7
Chr1	stalkie_big_nohaplotig	CDS	96881576	96881830	.	+	0	Parent=comp163325_c0_seq1.mrna7
Chr1	gffcl	locus	96914023	96914194	.	-	.	ID=RLOC_00009679;geneIDs=comp162922_c0_seq1.path1;transcripts=comp162922_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	96914023	96914194	.	-	.	ID=comp162922_c0_seq1.mrna1;geneID=comp162922_c0_seq1.path1;Name=comp162922_c0_seq1;Dir=indeterminatecoverage=9.0;identity=95.9;matches=165;mismatches=7;indels=0;unknowns=0;Target=comp162922_c0_seq1 172 1 .;locus=RLOC_00009679
Chr1	stalkie_big_nohaplotig	exon	96914023	96914194	95	-	.	Parent=comp162922_c0_seq1.mrna1
Chr1	gffcl	locus	97049441	97051696	.	-	.	ID=RLOC_00009682;geneIDs=comp162230_c2_seq1.path1;transcripts=comp162230_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	97049441	97051696	.	-	.	ID=comp162230_c2_seq1.mrna1;geneID=comp162230_c2_seq1.path1;Name=comp162230_c2_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=2248;mismatches=8;indels=24;unknowns=0;Target=comp162230_c2_seq1 2280 1 .;CDS_Target=comp162230_c2_seq1 2173 740 .;locus=RLOC_00009682
Chr1	stalkie_big_nohaplotig	exon	97049441	97051696	98	-	.	Parent=comp162230_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	97049548	97050967	.	-	0	Parent=comp162230_c2_seq1.mrna1
Chr1	gffcl	locus	97124586	97125075	.	-	.	ID=RLOC_00009683;geneIDs=comp142441_c0_seq1.path1;transcripts=comp142441_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	97124586	97125075	.	-	.	ID=comp142441_c0_seq1.mrna1;geneID=comp142441_c0_seq1.path1;Name=comp142441_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=490;mismatches=0;indels=0;unknowns=0;Target=comp142441_c0_seq1 490 1 .;CDS_Target=comp142441_c0_seq1 86 3 .;locus=RLOC_00009683
Chr1	stalkie_big_nohaplotig	exon	97124586	97125075	100	-	.	Parent=comp142441_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	97124990	97125073	.	-	0	Parent=comp142441_c0_seq1.mrna1
Chr1	gffcl	locus	97127863	97301383	.	-	.	ID=RLOC_00009684;geneIDs=comp153183_c1_seq1.path1;transcripts=comp153183_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	97127863	97301383	.	-	.	ID=comp153183_c1_seq1.mrna1;geneID=comp153183_c1_seq1.path1;Name=comp153183_c1_seq1;Dir=indeterminatecoverage=96.2;identity=98.2;matches=1350;mismatches=10;indels=15;unknowns=0;Target=comp153183_c1_seq1 1145 3 .;locus=RLOC_00009684
Chr1	stalkie_big_nohaplotig	exon	97127863	97127867	100	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1375 1371 .
Chr1	stalkie_big_nohaplotig	exon	97135584	97135586	100	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1370 1368 .
Chr1	stalkie_big_nohaplotig	exon	97150751	97150755	100	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1367 1363 .
Chr1	stalkie_big_nohaplotig	exon	97165079	97165086	100	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1362 1355 .
Chr1	stalkie_big_nohaplotig	exon	97170310	97170316	100	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1354 1348 .
Chr1	stalkie_big_nohaplotig	exon	97193936	97193940	100	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1347 1343 .
Chr1	stalkie_big_nohaplotig	exon	97207926	97207927	100	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1342 1341 .
Chr1	stalkie_big_nohaplotig	exon	97208004	97208007	100	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1340 1337 .
Chr1	stalkie_big_nohaplotig	exon	97212341	97212347	100	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1336 1330 .
Chr1	stalkie_big_nohaplotig	exon	97214209	97214216	100	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1329 1322 .
Chr1	stalkie_big_nohaplotig	exon	97215855	97215860	100	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1321 1316 .
Chr1	stalkie_big_nohaplotig	exon	97216909	97216911	100	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1315 1313 .
Chr1	stalkie_big_nohaplotig	exon	97218144	97218148	100	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1312 1308 .
Chr1	stalkie_big_nohaplotig	exon	97219919	97219928	100	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1307 1298 .
Chr1	stalkie_big_nohaplotig	exon	97238829	97238831	100	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1297 1295 .
Chr1	stalkie_big_nohaplotig	exon	97242217	97242223	100	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1294 1288 .
Chr1	stalkie_big_nohaplotig	exon	97250494	97250508	50	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1287 1258 .
Chr1	stalkie_big_nohaplotig	exon	97251465	97251466	100	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1257 1256 .
Chr1	stalkie_big_nohaplotig	exon	97257465	97257474	100	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1255 1246 .
Chr1	stalkie_big_nohaplotig	exon	97272004	97272008	100	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1245 1241 .
Chr1	stalkie_big_nohaplotig	exon	97287872	97287876	100	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1240 1236 .
Chr1	stalkie_big_nohaplotig	exon	97292777	97292778	100	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1235 1234 .
Chr1	stalkie_big_nohaplotig	exon	97300151	97301383	99	-	.	Parent=comp153183_c1_seq1.mrna1;Target=comp153183_c1_seq1 1233 1 .
Chr1	stalkie_big_nohaplotig	CDS	97300239	97301381	.	-	0	Parent=comp153183_c1_seq1.mrna1
Chr1	gffcl	locus	97325678	97327653	.	+	.	ID=RLOC_00009685;geneIDs=comp162682_c1_seq1.path2;transcripts=comp162682_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	97325678	97327653	.	+	.	ID=comp162682_c1_seq1.mrna2;geneID=comp162682_c1_seq1.path2;Name=comp162682_c1_seq1;Dir=indeterminatecoverage=99.9;identity=96.2;matches=1901;mismatches=70;indels=5;unknowns=0;Target=comp162682_c1_seq1 1971 1 .;CDS_Target=comp162682_c1_seq1 873 1 .;locus=RLOC_00009685
Chr1	stalkie_big_nohaplotig	exon	97325678	97327653	96	+	.	Parent=comp162682_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	97325678	97326555	.	+	0	Parent=comp162682_c1_seq1.mrna2
Chr1	gffcl	locus	97777623	97778025	.	-	.	ID=RLOC_00009690;geneIDs=comp153615_c1_seq1.path7;transcripts=comp153615_c1_seq1.mrna7
Chr1	stalkie_big_nohaplotig	mRNA	97777623	97778025	.	-	.	ID=comp153615_c1_seq1.mrna7;geneID=comp153615_c1_seq1.path7;Name=comp153615_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=402;mismatches=1;indels=0;unknowns=0;Target=comp153615_c1_seq1 403 1 .;CDS_Target=comp153615_c1_seq1 96 1 .;locus=RLOC_00009690
Chr1	stalkie_big_nohaplotig	exon	97777623	97778025	99	-	.	Parent=comp153615_c1_seq1.mrna7
Chr1	stalkie_big_nohaplotig	CDS	97777930	97778025	.	-	0	Parent=comp153615_c1_seq1.mrna7
Chr1	gffcl	locus	97884653	97889236	.	-	.	ID=RLOC_00009695;geneIDs=comp160627_c1_seq1.path1;transcripts=comp160627_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	97884653	97889236	.	-	.	ID=comp160627_c1_seq1.mrna1;geneID=comp160627_c1_seq1.path1;Name=comp160627_c1_seq1;Dir=antisensecoverage=14.9;identity=93.9;matches=571;mismatches=16;indels=21;unknowns=0;Target=comp160627_c1_seq1 1668 1799 .;locus=RLOC_00009695
Chr1	stalkie_big_nohaplotig	exon	97884653	97884850	87	-	.	Parent=comp160627_c1_seq1.mrna1;Target=comp160627_c1_seq1 1426 1632 -
Chr1	stalkie_big_nohaplotig	exon	97888843	97889236	97	-	.	Parent=comp160627_c1_seq1.mrna1;Target=comp160627_c1_seq1 1633 2028 -
Chr1	stalkie_big_nohaplotig	CDS	97888878	97889009	.	-	0	Parent=comp160627_c1_seq1.mrna1
Chr1	gffcl	locus	97928352	97929377	.	+	.	ID=RLOC_00009696;geneIDs=FBgn0030874.1.path1;transcripts=FBgn0030874.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	97928352	97929377	.	+	.	ID=FBgn0030874.1.mrna1;geneID=FBgn0030874.1.path1;Name=FBgn0030874.1;Dir=sensecoverage=100.0;identity=100.0;matches=888;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009696
Chr1	stalkie_big_nohaplotig	exon	97928352	97928482	100	+	.	Parent=FBgn0030874.1.mrna1;Target=FBgn0030874.1 1 131 +
Chr1	stalkie_big_nohaplotig	exon	97928558	97928660	100	+	.	Parent=FBgn0030874.1.mrna1;Target=FBgn0030874.1 132 234 +
Chr1	stalkie_big_nohaplotig	exon	97928724	97929377	100	+	.	Parent=FBgn0030874.1.mrna1;Target=FBgn0030874.1 235 888 +
Chr1	stalkie_big_nohaplotig	CDS	97928352	97928482	.	+	0	Parent=FBgn0030874.1.mrna1;Target=FBgn0030874.1 1 131 +
Chr1	stalkie_big_nohaplotig	CDS	97928558	97928660	.	+	1	Parent=FBgn0030874.1.mrna1;Target=FBgn0030874.1 132 234 +
Chr1	stalkie_big_nohaplotig	CDS	97928724	97929377	.	+	0	Parent=FBgn0030874.1.mrna1;Target=FBgn0030874.1 235 888 +
Chr1	gffcl	locus	97929461	98015177	.	+	.	ID=RLOC_00009697;geneIDs=comp145514_c1_seq1.path1;transcripts=comp145514_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	97929461	98015177	.	+	.	ID=comp145514_c1_seq1.mrna1;geneID=comp145514_c1_seq1.path1;Name=comp145514_c1_seq1;Dir=indeterminatecoverage=91.6;identity=99.2;matches=935;mismatches=8;indels=0;unknowns=0;Target=comp145514_c1_seq1 191 33 .;locus=RLOC_00009697
Chr1	stalkie_big_nohaplotig	exon	97929461	97930345	99	+	.	Parent=comp145514_c1_seq1.mrna1;Target=comp145514_c1_seq1 915 31 .
Chr1	stalkie_big_nohaplotig	exon	97938938	97938939	100	+	.	Parent=comp145514_c1_seq1.mrna1;Target=comp145514_c1_seq1 917 916 .
Chr1	stalkie_big_nohaplotig	exon	97942111	97942116	100	+	.	Parent=comp145514_c1_seq1.mrna1;Target=comp145514_c1_seq1 923 918 .
Chr1	stalkie_big_nohaplotig	exon	97962641	97962645	100	+	.	Parent=comp145514_c1_seq1.mrna1;Target=comp145514_c1_seq1 928 924 .
Chr1	stalkie_big_nohaplotig	exon	97970690	97970711	86	+	.	Parent=comp145514_c1_seq1.mrna1;Target=comp145514_c1_seq1 950 929 .
Chr1	stalkie_big_nohaplotig	exon	97973649	97973653	100	+	.	Parent=comp145514_c1_seq1.mrna1;Target=comp145514_c1_seq1 955 951 .
Chr1	stalkie_big_nohaplotig	exon	97997601	97997603	100	+	.	Parent=comp145514_c1_seq1.mrna1;Target=comp145514_c1_seq1 958 956 .
Chr1	stalkie_big_nohaplotig	exon	98002719	98002724	100	+	.	Parent=comp145514_c1_seq1.mrna1;Target=comp145514_c1_seq1 964 959 .
Chr1	stalkie_big_nohaplotig	exon	98009453	98009459	100	+	.	Parent=comp145514_c1_seq1.mrna1;Target=comp145514_c1_seq1 971 965 .
Chr1	stalkie_big_nohaplotig	exon	98015176	98015177	100	+	.	Parent=comp145514_c1_seq1.mrna1;Target=comp145514_c1_seq1 973 972 .
Chr1	stalkie_big_nohaplotig	CDS	97929463	97929621	.	+	0	Parent=comp145514_c1_seq1.mrna1
Chr1	gffcl	locus	98167656	98169465	.	-	.	ID=RLOC_00009699;geneIDs=comp159363_c0_seq1.path1;transcripts=comp159363_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	98167656	98169465	.	-	.	ID=comp159363_c0_seq1.mrna1;geneID=comp159363_c0_seq1.path1;Name=comp159363_c0_seq1;Dir=indeterminatecoverage=100.0;identity=85.5;matches=1298;mismatches=138;indels=83;unknowns=0;Target=comp159363_c0_seq1 1205 1155 .;locus=RLOC_00009699
Chr1	stalkie_big_nohaplotig	exon	98167656	98168879	85	-	.	Parent=comp159363_c0_seq1.mrna1;Target=comp159363_c0_seq1 1474 240 .
Chr1	stalkie_big_nohaplotig	exon	98168944	98169085	93	-	.	Parent=comp159363_c0_seq1.mrna1;Target=comp159363_c0_seq1 239 98 .
Chr1	stalkie_big_nohaplotig	exon	98169351	98169465	77	-	.	Parent=comp159363_c0_seq1.mrna1;Target=comp159363_c0_seq1 97 1 .
Chr1	stalkie_big_nohaplotig	CDS	98167933	98167976	.	-	0	Parent=comp159363_c0_seq1.mrna1
Chr1	gffcl	locus	98288510	98666283	.	-	.	ID=RLOC_00009701;geneIDs=Dp_FBgn0245446.path2;transcripts=Dp_FBgn0245446.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	98288510	98666283	.	-	.	ID=Dp_FBgn0245446.mrna2;geneID=Dp_FBgn0245446.path2;Name=Dp_FBgn0245446;Dir=antisensecoverage=100.0;identity=95.4;matches=251;mismatches=10;indels=2;unknowns=0;Target=Dp_FBgn0245446 71 169 .;locus=RLOC_00009701
Chr1	stalkie_big_nohaplotig	exon	98288510	98288728	95	-	.	Parent=Dp_FBgn0245446.mrna2;Target=Dp_FBgn0245446 1 217 -
Chr1	stalkie_big_nohaplotig	exon	98666240	98666283	93	-	.	Parent=Dp_FBgn0245446.mrna2;Target=Dp_FBgn0245446 218 261 -
Chr1	stalkie_big_nohaplotig	CDS	98288580	98288678	.	-	0	Parent=Dp_FBgn0245446.mrna2
Chr1	gffcl	locus	98294112	98606294	.	+	.	ID=RLOC_00009702;geneIDs=comp163413_c5_seq1.path1;transcripts=comp163413_c5_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	98294112	98606294	.	+	.	ID=comp163413_c5_seq1.mrna1;geneID=comp163413_c5_seq1.path1;Name=comp163413_c5_seq1;Dir=indeterminatecoverage=91.9;identity=96.2;matches=986;mismatches=39;indels=0;unknowns=0;Target=comp163413_c5_seq1 387 91 .;locus=RLOC_00009702
Chr1	stalkie_big_nohaplotig	exon	98294112	98294433	89	+	.	Parent=comp163413_c5_seq1.mrna1;Target=comp163413_c5_seq1 412 91 .
Chr1	stalkie_big_nohaplotig	exon	98605592	98606294	99	+	.	Parent=comp163413_c5_seq1.mrna1;Target=comp163413_c5_seq1 1115 413 .
Chr1	stalkie_big_nohaplotig	CDS	98294112	98294408	.	+	0	Parent=comp163413_c5_seq1.mrna1
Chr1	gffcl	locus	98343345	98343789	.	-	.	ID=RLOC_00009703;geneIDs=comp163510_c2_seq1.path1;transcripts=comp163510_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	98343345	98343789	.	-	.	ID=comp163510_c2_seq1.mrna1;geneID=comp163510_c2_seq1.path1;Name=comp163510_c2_seq1;Dir=indeterminatecoverage=16.3;identity=98.4;matches=438;mismatches=7;indels=0;unknowns=0;Target=comp163510_c2_seq1 445 1 .;locus=RLOC_00009703
Chr1	stalkie_big_nohaplotig	exon	98343345	98343789	98	-	.	Parent=comp163510_c2_seq1.mrna1
Chr1	gffcl	locus	98397198	98484790	.	-	.	ID=RLOC_00009706;geneIDs=FBgn0030435.1.path1;transcripts=FBgn0030435.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	98397198	98484790	.	-	.	ID=FBgn0030435.1.mrna1;geneID=FBgn0030435.1.path1;Name=FBgn0030435.1;Dir=sensecoverage=100.0;identity=100.0;matches=1026;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009706
Chr1	stalkie_big_nohaplotig	exon	98397198	98397455	100	-	.	Parent=FBgn0030435.1.mrna1;Target=FBgn0030435.1 769 1026 +
Chr1	stalkie_big_nohaplotig	exon	98397509	98397601	100	-	.	Parent=FBgn0030435.1.mrna1;Target=FBgn0030435.1 676 768 +
Chr1	stalkie_big_nohaplotig	exon	98484057	98484257	100	-	.	Parent=FBgn0030435.1.mrna1;Target=FBgn0030435.1 475 675 +
Chr1	stalkie_big_nohaplotig	exon	98484317	98484790	100	-	.	Parent=FBgn0030435.1.mrna1;Target=FBgn0030435.1 1 474 +
Chr1	stalkie_big_nohaplotig	CDS	98397198	98397455	.	-	0	Parent=FBgn0030435.1.mrna1;Target=FBgn0030435.1 769 1026 +
Chr1	stalkie_big_nohaplotig	CDS	98397509	98397601	.	-	0	Parent=FBgn0030435.1.mrna1;Target=FBgn0030435.1 676 768 +
Chr1	stalkie_big_nohaplotig	CDS	98484057	98484257	.	-	0	Parent=FBgn0030435.1.mrna1;Target=FBgn0030435.1 475 675 +
Chr1	stalkie_big_nohaplotig	CDS	98484317	98484790	.	-	0	Parent=FBgn0030435.1.mrna1;Target=FBgn0030435.1 1 474 +
Chr1	gffcl	locus	98414706	98419011	.	-	.	ID=RLOC_00009707;geneIDs=comp163941_c1_seq1.path1;transcripts=comp163941_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	98414706	98419011	.	-	.	ID=comp163941_c1_seq1.mrna1;geneID=comp163941_c1_seq1.path1;Name=comp163941_c1_seq1;Dir=indeterminatecoverage=84.2;identity=95.0;matches=3908;mismatches=100;indels=104;unknowns=0;Target=comp163941_c1_seq1 555 334 .;locus=RLOC_00009707
Chr1	stalkie_big_nohaplotig	exon	98414706	98414741	91	-	.	Parent=comp163941_c1_seq1.mrna1;Target=comp163941_c1_seq1 4063 4028 .
Chr1	stalkie_big_nohaplotig	exon	98414776	98417941	94	-	.	Parent=comp163941_c1_seq1.mrna1;Target=comp163941_c1_seq1 4003 934 .
Chr1	stalkie_big_nohaplotig	exon	98418107	98419011	98	-	.	Parent=comp163941_c1_seq1.mrna1;Target=comp163941_c1_seq1 933 27 .
Chr1	stalkie_big_nohaplotig	CDS	98418485	98418706	.	-	0	Parent=comp163941_c1_seq1.mrna1
Chr1	gffcl	locus	98422851	98423842	.	+	.	ID=RLOC_00009708;geneIDs=Caenorhabditis.path2,comp147589_c0_seq1.path6;transcripts=comp147589_c0_seq1.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	98422851	98423842	.	+	.	ID=comp147589_c0_seq1.mrna6;geneID=comp147589_c0_seq1.path6;Name=comp147589_c0_seq1;Dir=indeterminatecoverage=87.6;identity=99.4;matches=986;mismatches=6;indels=0;unknowns=0;Target=comp147589_c0_seq1 992 1 .;CDS_Target=comp147589_c0_seq1 874 2 .;locus=RLOC_00009708
Chr1	stalkie_big_nohaplotig	exon	98422851	98423842	99	+	.	Parent=comp147589_c0_seq1.mrna6
Chr1	stalkie_big_nohaplotig	CDS	98422852	98423724	.	+	0	Parent=comp147589_c0_seq1.mrna6
Chr1	gffcl	locus	98479264	98479778	.	+	.	ID=RLOC_00009709;geneIDs=comp115134_c0_seq1.path1;transcripts=comp115134_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	98479264	98479778	.	+	.	ID=comp115134_c0_seq1.mrna1;geneID=comp115134_c0_seq1.path1;Name=comp115134_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=515;mismatches=0;indels=0;unknowns=0;Target=comp115134_c0_seq1 515 1 .;CDS_Target=comp115134_c0_seq1 79 2 .;locus=RLOC_00009709
Chr1	stalkie_big_nohaplotig	exon	98479264	98479778	100	+	.	Parent=comp115134_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	98479265	98479342	.	+	0	Parent=comp115134_c0_seq1.mrna1
Chr1	gffcl	locus	98488389	98488427	.	-	.	ID=RLOC_00009710;geneIDs=comp161746_c10_seq1.path1;transcripts=comp161746_c10_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	98488389	98488427	.	-	.	ID=comp161746_c10_seq1.mrna1;geneID=comp161746_c10_seq1.path1;Name=comp161746_c10_seq1;Dir=indeterminatecoverage=1.3;identity=100.0;matches=39;mismatches=0;indels=0;unknowns=0;Target=comp161746_c10_seq1 39 1 .;locus=RLOC_00009710
Chr1	stalkie_big_nohaplotig	exon	98488389	98488427	100	-	.	Parent=comp161746_c10_seq1.mrna1
Chr1	gffcl	locus	98535346	98565194	.	+	.	ID=RLOC_00009711;geneIDs=comp149553_c0_seq1.path1;transcripts=comp149553_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	98535346	98565194	.	+	.	ID=comp149553_c0_seq1.mrna1;geneID=comp149553_c0_seq1.path1;Name=comp149553_c0_seq1;Dir=indeterminatecoverage=95.1;identity=99.1;matches=425;mismatches=3;indels=1;unknowns=0;Target=comp149553_c0_seq1 384 298 .;locus=RLOC_00009711
Chr1	stalkie_big_nohaplotig	exon	98535346	98535751	99	+	.	Parent=comp149553_c0_seq1.mrna1;Target=comp149553_c0_seq1 405 1 .
Chr1	stalkie_big_nohaplotig	exon	98535964	98535968	100	+	.	Parent=comp149553_c0_seq1.mrna1;Target=comp149553_c0_seq1 410 406 .
Chr1	stalkie_big_nohaplotig	exon	98543434	98543436	100	+	.	Parent=comp149553_c0_seq1.mrna1;Target=comp149553_c0_seq1 413 411 .
Chr1	stalkie_big_nohaplotig	exon	98551137	98551138	100	+	.	Parent=comp149553_c0_seq1.mrna1;Target=comp149553_c0_seq1 415 414 .
Chr1	stalkie_big_nohaplotig	exon	98557682	98557683	100	+	.	Parent=comp149553_c0_seq1.mrna1;Target=comp149553_c0_seq1 417 416 .
Chr1	stalkie_big_nohaplotig	exon	98565184	98565194	100	+	.	Parent=comp149553_c0_seq1.mrna1;Target=comp149553_c0_seq1 428 418 .
Chr1	stalkie_big_nohaplotig	CDS	98535644	98535730	.	+	0	Parent=comp149553_c0_seq1.mrna1
Chr1	gffcl	locus	98600662	98659228	.	-	.	ID=RLOC_00009713;geneIDs=comp163748_c4_seq1.path1;transcripts=comp163748_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	98600662	98659228	.	-	.	ID=comp163748_c4_seq1.mrna1;geneID=comp163748_c4_seq1.path1;Name=comp163748_c4_seq1;Dir=indeterminatecoverage=88.4;identity=99.7;matches=2685;mismatches=8;indels=1;unknowns=0;Target=comp163748_c4_seq1 2221 1760 .;locus=RLOC_00009713
Chr1	stalkie_big_nohaplotig	exon	98600662	98600772	98	-	.	Parent=comp163748_c4_seq1.mrna1;Target=comp163748_c4_seq1 3316 3205 .
Chr1	stalkie_big_nohaplotig	exon	98617845	98619289	99	-	.	Parent=comp163748_c4_seq1.mrna1;Target=comp163748_c4_seq1 3204 1760 .
Chr1	stalkie_big_nohaplotig	exon	98646339	98646549	100	-	.	Parent=comp163748_c4_seq1.mrna1;Target=comp163748_c4_seq1 1759 1549 .
Chr1	stalkie_big_nohaplotig	exon	98652335	98652654	99	-	.	Parent=comp163748_c4_seq1.mrna1;Target=comp163748_c4_seq1 1548 1229 .
Chr1	stalkie_big_nohaplotig	exon	98658614	98658980	99	-	.	Parent=comp163748_c4_seq1.mrna1;Target=comp163748_c4_seq1 1228 862 .
Chr1	stalkie_big_nohaplotig	exon	98658990	98659228	100	-	.	Parent=comp163748_c4_seq1.mrna1;Target=comp163748_c4_seq1 504 266 .
Chr1	stalkie_big_nohaplotig	CDS	98618828	98619289	.	-	0	Parent=comp163748_c4_seq1.mrna1
Chr1	gffcl	locus	98654952	99006827	.	-	.	ID=RLOC_00009714;geneIDs=FBgn0030872.1.path1,comp158093_c1_seq1.path1;transcripts=comp158093_c1_seq1.mrna1,FBgn0030872.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	98654952	99006827	.	-	.	ID=comp158093_c1_seq1.mrna1;geneID=comp158093_c1_seq1.path1;Name=comp158093_c1_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=1834;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009714
Chr1	stalkie_big_nohaplotig	exon	98654952	98655623	99	-	.	Parent=comp158093_c1_seq1.mrna1;Target=comp158093_c1_seq1 1 672 -
Chr1	stalkie_big_nohaplotig	exon	98986285	98986291	100	-	.	Parent=comp158093_c1_seq1.mrna1;Target=comp158093_c1_seq1 673 679 -
Chr1	stalkie_big_nohaplotig	exon	98994329	98994336	100	-	.	Parent=comp158093_c1_seq1.mrna1;Target=comp158093_c1_seq1 680 687 -
Chr1	stalkie_big_nohaplotig	exon	99003988	99003991	100	-	.	Parent=comp158093_c1_seq1.mrna1;Target=comp158093_c1_seq1 688 691 -
Chr1	stalkie_big_nohaplotig	exon	99005146	99005326	100	-	.	Parent=comp158093_c1_seq1.mrna1;Target=comp158093_c1_seq1 692 872 -
Chr1	stalkie_big_nohaplotig	exon	99005390	99005706	100	-	.	Parent=comp158093_c1_seq1.mrna1;Target=comp158093_c1_seq1 873 1189 -
Chr1	stalkie_big_nohaplotig	exon	99005792	99005901	100	-	.	Parent=comp158093_c1_seq1.mrna1;Target=comp158093_c1_seq1 1190 1299 -
Chr1	stalkie_big_nohaplotig	exon	99006160	99006426	100	-	.	Parent=comp158093_c1_seq1.mrna1;Target=comp158093_c1_seq1 1300 1566 -
Chr1	stalkie_big_nohaplotig	exon	99006558	99006827	99	-	.	Parent=comp158093_c1_seq1.mrna1;Target=comp158093_c1_seq1 1567 1836 -
Chr1	stalkie_big_nohaplotig	CDS	98655468	98655623	.	-	0	Parent=comp158093_c1_seq1.mrna1;Target=comp158093_c1_seq1 517 672 .
Chr1	stalkie_big_nohaplotig	CDS	98986285	98986291	.	-	1	Parent=comp158093_c1_seq1.mrna1;Target=comp158093_c1_seq1 673 679 .
Chr1	stalkie_big_nohaplotig	CDS	98994329	98994336	.	-	0	Parent=comp158093_c1_seq1.mrna1;Target=comp158093_c1_seq1 680 687 .
Chr1	stalkie_big_nohaplotig	CDS	99003988	99003991	.	-	1	Parent=comp158093_c1_seq1.mrna1;Target=comp158093_c1_seq1 688 691 .
Chr1	stalkie_big_nohaplotig	CDS	99005146	99005326	.	-	2	Parent=comp158093_c1_seq1.mrna1;Target=comp158093_c1_seq1 692 872 .
Chr1	stalkie_big_nohaplotig	CDS	99005390	99005706	.	-	1	Parent=comp158093_c1_seq1.mrna1;Target=comp158093_c1_seq1 873 1189 .
Chr1	stalkie_big_nohaplotig	CDS	99005792	99005901	.	-	0	Parent=comp158093_c1_seq1.mrna1;Target=comp158093_c1_seq1 1190 1299 .
Chr1	stalkie_big_nohaplotig	CDS	99006160	99006411	.	-	0	Parent=comp158093_c1_seq1.mrna1;Target=comp158093_c1_seq1 1300 1551 .
Chr1	stalkie_big_nohaplotig	mRNA	98660394	99006420	.	-	.	ID=FBgn0030872.1.mrna1;geneID=FBgn0030872.1.path1;Name=FBgn0030872.1;Dir=sensecoverage=100.0;identity=100.0;matches=1041;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009714
Chr1	stalkie_big_nohaplotig	exon	98660394	98660565	100	-	.	Parent=FBgn0030872.1.mrna1;Target=FBgn0030872.1 870 1041 +
Chr1	stalkie_big_nohaplotig	exon	99005146	99005326	100	-	.	Parent=FBgn0030872.1.mrna1;Target=FBgn0030872.1 689 869 +
Chr1	stalkie_big_nohaplotig	exon	99005390	99005706	100	-	.	Parent=FBgn0030872.1.mrna1;Target=FBgn0030872.1 372 688 +
Chr1	stalkie_big_nohaplotig	exon	99005792	99005901	100	-	.	Parent=FBgn0030872.1.mrna1;Target=FBgn0030872.1 262 371 +
Chr1	stalkie_big_nohaplotig	exon	99006160	99006420	100	-	.	Parent=FBgn0030872.1.mrna1;Target=FBgn0030872.1 1 261 +
Chr1	stalkie_big_nohaplotig	CDS	98660394	98660565	.	-	1	Parent=FBgn0030872.1.mrna1;Target=FBgn0030872.1 870 1041 +
Chr1	stalkie_big_nohaplotig	CDS	99005146	99005326	.	-	2	Parent=FBgn0030872.1.mrna1;Target=FBgn0030872.1 689 869 +
Chr1	stalkie_big_nohaplotig	CDS	99005390	99005706	.	-	1	Parent=FBgn0030872.1.mrna1;Target=FBgn0030872.1 372 688 +
Chr1	stalkie_big_nohaplotig	CDS	99005792	99005901	.	-	0	Parent=FBgn0030872.1.mrna1;Target=FBgn0030872.1 262 371 +
Chr1	stalkie_big_nohaplotig	CDS	99006160	99006420	.	-	0	Parent=FBgn0030872.1.mrna1;Target=FBgn0030872.1 1 261 +
Chr1	stalkie_big_nohaplotig	mRNA	98714530	98716112	.	+	.	ID=comp153269_c0_seq1.mrna1;geneID=comp153269_c0_seq1.path1;Name=comp153269_c0_seq1;Dir=indeterminatecoverage=99.9;identity=90.7;matches=1576;mismatches=7;indels=155;unknowns=0;Target=comp153269_c0_seq1 1738 1 .;CDS_Target=comp153269_c0_seq1 502 359 .;locus=RLOC_00009716
Chr1	stalkie_big_nohaplotig	exon	98714530	98716112	90	+	.	Parent=comp153269_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	98714888	98715031	.	+	0	Parent=comp153269_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	98737500	98738908	.	-	.	ID=comp163919_c0_seq1.mrna1;geneID=comp163919_c0_seq1.path1;Name=comp163919_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=1395;mismatches=14;indels=11;unknowns=0;Target=comp163919_c0_seq1 1420 1 .;CDS_Target=comp163919_c0_seq1 916 605 .;locus=RLOC_00009716
Chr1	stalkie_big_nohaplotig	exon	98737500	98738908	98	-	.	Parent=comp163919_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	98738004	98738315	.	-	0	Parent=comp163919_c0_seq1.mrna1
Chr1	gffcl	locus	98720421	99230760	.	+	.	ID=RLOC_00009717;geneIDs=comp162434_c5_seq1.path1;transcripts=comp162434_c5_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	98720421	99230760	.	+	.	ID=comp162434_c5_seq1.mrna1;geneID=comp162434_c5_seq1.path1;Name=comp162434_c5_seq1;Dir=sensecoverage=58.8;identity=88.4;matches=971;mismatches=83;indels=44;unknowns=0;Target=comp162434_c5_seq1 742 822 +;locus=RLOC_00009717
Chr1	stalkie_big_nohaplotig	exon	98720421	98720789	90	+	.	Parent=comp162434_c5_seq1.mrna1;Target=comp162434_c5_seq1 524 875 +
Chr1	stalkie_big_nohaplotig	exon	98720851	98720906	92	+	.	Parent=comp162434_c5_seq1.mrna1;Target=comp162434_c5_seq1 905 960 +
Chr1	stalkie_big_nohaplotig	exon	98730734	98730737	100	+	.	Parent=comp162434_c5_seq1.mrna1;Target=comp162434_c5_seq1 961 964 +
Chr1	stalkie_big_nohaplotig	exon	98750627	98750630	100	+	.	Parent=comp162434_c5_seq1.mrna1;Target=comp162434_c5_seq1 965 968 +
Chr1	stalkie_big_nohaplotig	exon	98756886	98756897	100	+	.	Parent=comp162434_c5_seq1.mrna1;Target=comp162434_c5_seq1 969 980 +
Chr1	stalkie_big_nohaplotig	exon	99223177	99223618	88	+	.	Parent=comp162434_c5_seq1.mrna1;Target=comp162434_c5_seq1 1013 1447 +
Chr1	stalkie_big_nohaplotig	exon	99229395	99229477	91	+	.	Parent=comp162434_c5_seq1.mrna1;Target=comp162434_c5_seq1 1448 1530 +
Chr1	stalkie_big_nohaplotig	exon	99230634	99230760	74	+	.	Parent=comp162434_c5_seq1.mrna1;Target=comp162434_c5_seq1 1531 1639 +
Chr1	stalkie_big_nohaplotig	CDS	98720656	98720736	.	+	0	Parent=comp162434_c5_seq1.mrna1
Chr1	gffcl	locus	98739555	100412024	.	+	.	ID=RLOC_00009718;geneIDs=comp157930_c1_seq1.path1;transcripts=comp157930_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	98739555	100412024	.	+	.	ID=comp157930_c1_seq1.mrna1;geneID=comp157930_c1_seq1.path1;Name=comp157930_c1_seq1;Dir=indeterminatecoverage=95.0;identity=99.0;matches=1063;mismatches=11;indels=0;unknowns=0;Target=comp157930_c1_seq1 394 233 .;locus=RLOC_00009718
Chr1	stalkie_big_nohaplotig	exon	98739555	98740493	98	+	.	Parent=comp157930_c1_seq1.mrna1;Target=comp157930_c1_seq1 939 1 .
Chr1	stalkie_big_nohaplotig	exon	98740583	98740703	99	+	.	Parent=comp157930_c1_seq1.mrna1;Target=comp157930_c1_seq1 1060 940 .
Chr1	stalkie_big_nohaplotig	exon	100408828	100408830	100	+	.	Parent=comp157930_c1_seq1.mrna1;Target=comp157930_c1_seq1 1063 1061 .
Chr1	stalkie_big_nohaplotig	exon	100412014	100412024	100	+	.	Parent=comp157930_c1_seq1.mrna1;Target=comp157930_c1_seq1 1074 1064 .
Chr1	stalkie_big_nohaplotig	CDS	98739787	98739948	.	+	0	Parent=comp157930_c1_seq1.mrna1
Chr1	gffcl	locus	98758898	98759417	.	-	.	ID=RLOC_00009719;geneIDs=comp137017_c0_seq1.path1;transcripts=comp137017_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	98758898	98759417	.	-	.	ID=comp137017_c0_seq1.mrna1;geneID=comp137017_c0_seq1.path1;Name=comp137017_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=520;mismatches=0;indels=0;unknowns=0;Target=comp137017_c0_seq1 521 2 .;CDS_Target=comp137017_c0_seq1 390 301 .;locus=RLOC_00009719
Chr1	stalkie_big_nohaplotig	exon	98758898	98759417	100	-	.	Parent=comp137017_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	98759029	98759118	.	-	0	Parent=comp137017_c0_seq1.mrna1
Chr1	gffcl	locus	98762836	98762904	.	-	.	ID=RLOC_00009720;geneIDs=FBgn0032997.1.path1;transcripts=FBgn0032997.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	98762836	98762904	.	-	.	ID=FBgn0032997.1.mrna1;geneID=FBgn0032997.1.path1;Name=FBgn0032997.1;Dir=indeterminatecoverage=4.1;identity=100.0;matches=69;mismatches=0;indels=0;unknowns=0;Target=FBgn0032997.1 69 1 .;locus=RLOC_00009720
Chr1	stalkie_big_nohaplotig	exon	98762836	98762904	100	-	.	Parent=FBgn0032997.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	98762836	98762904	.	-	0	Parent=FBgn0032997.1.mrna1
Chr1	gffcl	locus	98781859	98788355	.	-	.	ID=RLOC_00009721;geneIDs=comp151829_c0_seq1.path1;transcripts=comp151829_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	98781859	98788355	.	-	.	ID=comp151829_c0_seq1.mrna1;geneID=comp151829_c0_seq1.path1;Name=comp151829_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=1397;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009721
Chr1	stalkie_big_nohaplotig	exon	98781859	98782455	100	-	.	Parent=comp151829_c0_seq1.mrna1;Target=comp151829_c0_seq1 801 1397 +
Chr1	stalkie_big_nohaplotig	exon	98782513	98782713	100	-	.	Parent=comp151829_c0_seq1.mrna1;Target=comp151829_c0_seq1 600 800 +
Chr1	stalkie_big_nohaplotig	exon	98787757	98788355	100	-	.	Parent=comp151829_c0_seq1.mrna1;Target=comp151829_c0_seq1 1 599 +
Chr1	stalkie_big_nohaplotig	CDS	98782516	98782713	.	-	0	Parent=comp151829_c0_seq1.mrna1;Target=comp151829_c0_seq1 600 797 +
Chr1	stalkie_big_nohaplotig	CDS	98787757	98787825	.	-	0	Parent=comp151829_c0_seq1.mrna1;Target=comp151829_c0_seq1 531 599 +
Chr1	gffcl	locus	98783383	98787360	.	-	.	ID=RLOC_00009722;geneIDs=comp163087_c2_seq1.path1;transcripts=comp163087_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	98783383	98787360	.	-	.	ID=comp163087_c2_seq1.mrna1;geneID=comp163087_c2_seq1.path1;Name=comp163087_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=3961;mismatches=17;indels=0;unknowns=0;Target=comp163087_c2_seq1 3978 1 .;CDS_Target=comp163087_c2_seq1 3863 3474 .;locus=RLOC_00009722
Chr1	stalkie_big_nohaplotig	exon	98783383	98787360	99	-	.	Parent=comp163087_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	98783498	98783887	.	-	0	Parent=comp163087_c2_seq1.mrna1
Chr1	gffcl	locus	98788458	98788727	.	-	.	ID=RLOC_00009723;geneIDs=comp135244_c0_seq1.path1;transcripts=comp135244_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	98788458	98788727	.	-	.	ID=comp135244_c0_seq1.mrna1;geneID=comp135244_c0_seq1.path1;Name=comp135244_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=270;mismatches=0;indels=0;unknowns=0;Target=comp135244_c0_seq1 270 1 .;CDS_Target=comp135244_c0_seq1 268 179 .;locus=RLOC_00009723
Chr1	stalkie_big_nohaplotig	exon	98788458	98788727	100	-	.	Parent=comp135244_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	98788460	98788549	.	-	0	Parent=comp135244_c0_seq1.mrna1
Chr1	gffcl	locus	98788935	98794435	.	+	.	ID=RLOC_00009724;geneIDs=FBgn0034656.1.path1,comp161915_c0_seq1.path1;transcripts=comp161915_c0_seq1.mrna1,FBgn0034656.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	98788935	98794435	.	+	.	ID=comp161915_c0_seq1.mrna1;geneID=comp161915_c0_seq1.path1;Name=comp161915_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=4554;mismatches=4;indels=0;unknowns=0;locus=RLOC_00009724
Chr1	stalkie_big_nohaplotig	exon	98788935	98789653	99	+	.	Parent=comp161915_c0_seq1.mrna1;Target=comp161915_c0_seq1 3 721 +
Chr1	stalkie_big_nohaplotig	exon	98790315	98791667	99	+	.	Parent=comp161915_c0_seq1.mrna1;Target=comp161915_c0_seq1 722 2074 +
Chr1	stalkie_big_nohaplotig	exon	98791720	98792302	100	+	.	Parent=comp161915_c0_seq1.mrna1;Target=comp161915_c0_seq1 2075 2657 +
Chr1	stalkie_big_nohaplotig	exon	98792353	98792502	100	+	.	Parent=comp161915_c0_seq1.mrna1;Target=comp161915_c0_seq1 2658 2807 +
Chr1	stalkie_big_nohaplotig	exon	98792559	98792643	100	+	.	Parent=comp161915_c0_seq1.mrna1;Target=comp161915_c0_seq1 2808 2892 +
Chr1	stalkie_big_nohaplotig	exon	98792709	98792798	100	+	.	Parent=comp161915_c0_seq1.mrna1;Target=comp161915_c0_seq1 2893 2982 +
Chr1	stalkie_big_nohaplotig	exon	98792858	98794435	100	+	.	Parent=comp161915_c0_seq1.mrna1;Target=comp161915_c0_seq1 2983 4560 +
Chr1	stalkie_big_nohaplotig	CDS	98790949	98791667	.	+	0	Parent=comp161915_c0_seq1.mrna1;Target=comp161915_c0_seq1 1356 2074 +
Chr1	stalkie_big_nohaplotig	CDS	98791720	98792302	.	+	1	Parent=comp161915_c0_seq1.mrna1;Target=comp161915_c0_seq1 2075 2657 +
Chr1	stalkie_big_nohaplotig	CDS	98792353	98792502	.	+	0	Parent=comp161915_c0_seq1.mrna1;Target=comp161915_c0_seq1 2658 2807 +
Chr1	stalkie_big_nohaplotig	CDS	98792559	98792643	.	+	0	Parent=comp161915_c0_seq1.mrna1;Target=comp161915_c0_seq1 2808 2892 +
Chr1	stalkie_big_nohaplotig	CDS	98792709	98792798	.	+	2	Parent=comp161915_c0_seq1.mrna1;Target=comp161915_c0_seq1 2893 2982 +
Chr1	stalkie_big_nohaplotig	CDS	98792858	98793132	.	+	2	Parent=comp161915_c0_seq1.mrna1;Target=comp161915_c0_seq1 2983 3257 +
Chr1	stalkie_big_nohaplotig	mRNA	98790949	98794021	.	+	.	ID=FBgn0034656.1.mrna1;geneID=FBgn0034656.1.path1;Name=FBgn0034656.1;Dir=sensecoverage=100.0;identity=100.0;matches=2738;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009724
Chr1	stalkie_big_nohaplotig	exon	98790949	98791667	99	+	.	Parent=FBgn0034656.1.mrna1;Target=FBgn0034656.1 1 719 +
Chr1	stalkie_big_nohaplotig	exon	98791720	98792302	100	+	.	Parent=FBgn0034656.1.mrna1;Target=FBgn0034656.1 720 1302 +
Chr1	stalkie_big_nohaplotig	exon	98792353	98792502	100	+	.	Parent=FBgn0034656.1.mrna1;Target=FBgn0034656.1 1303 1452 +
Chr1	stalkie_big_nohaplotig	exon	98792559	98792643	100	+	.	Parent=FBgn0034656.1.mrna1;Target=FBgn0034656.1 1453 1537 +
Chr1	stalkie_big_nohaplotig	exon	98792709	98792798	100	+	.	Parent=FBgn0034656.1.mrna1;Target=FBgn0034656.1 1538 1627 +
Chr1	stalkie_big_nohaplotig	exon	98792858	98793112	100	+	.	Parent=FBgn0034656.1.mrna1;Target=FBgn0034656.1 1628 1882 +
Chr1	stalkie_big_nohaplotig	exon	98793165	98794021	100	+	.	Parent=FBgn0034656.1.mrna1;Target=FBgn0034656.1 1883 2739 +
Chr1	stalkie_big_nohaplotig	CDS	98790949	98791667	.	+	0	Parent=FBgn0034656.1.mrna1;Target=FBgn0034656.1 1 719 +
Chr1	stalkie_big_nohaplotig	CDS	98791720	98792302	.	+	1	Parent=FBgn0034656.1.mrna1;Target=FBgn0034656.1 720 1302 +
Chr1	stalkie_big_nohaplotig	CDS	98792353	98792502	.	+	0	Parent=FBgn0034656.1.mrna1;Target=FBgn0034656.1 1303 1452 +
Chr1	stalkie_big_nohaplotig	CDS	98792559	98792643	.	+	0	Parent=FBgn0034656.1.mrna1;Target=FBgn0034656.1 1453 1537 +
Chr1	stalkie_big_nohaplotig	CDS	98792709	98792798	.	+	2	Parent=FBgn0034656.1.mrna1;Target=FBgn0034656.1 1538 1627 +
Chr1	stalkie_big_nohaplotig	CDS	98792858	98793112	.	+	2	Parent=FBgn0034656.1.mrna1;Target=FBgn0034656.1 1628 1882 +
Chr1	stalkie_big_nohaplotig	CDS	98793165	98794021	.	+	2	Parent=FBgn0034656.1.mrna1;Target=FBgn0034656.1 1883 2739 +
Chr1	gffcl	locus	98798239	98798629	.	-	.	ID=RLOC_00009725;geneIDs=comp157882_c2_seq1.path4;transcripts=comp157882_c2_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	98798239	98798629	.	-	.	ID=comp157882_c2_seq1.mrna4;geneID=comp157882_c2_seq1.path4;Name=comp157882_c2_seq1;Dir=indeterminatecoverage=60.2;identity=85.3;matches=348;mismatches=32;indels=28;unknowns=0;Target=comp157882_c2_seq1 632 236 .;CDS_Target=comp157882_c2_seq1 285 238 .;locus=RLOC_00009725
Chr1	stalkie_big_nohaplotig	exon	98798239	98798629	85	-	.	Parent=comp157882_c2_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	98798579	98798627	.	-	0	Parent=comp157882_c2_seq1.mrna4
Chr1	gffcl	locus	98929964	98930157	.	+	.	ID=RLOC_00009727;geneIDs=Dp_FBgn0245446.path8;transcripts=Dp_FBgn0245446.mrna8
Chr1	stalkie_big_nohaplotig	mRNA	98929964	98930157	.	+	.	ID=Dp_FBgn0245446.mrna8;geneID=Dp_FBgn0245446.path8;Name=Dp_FBgn0245446;Dir=indeterminatecoverage=74.3;identity=97.9;matches=190;mismatches=4;indels=0;unknowns=0;Target=Dp_FBgn0245446 194 1 .;CDS_Target=Dp_FBgn0245446 192 1 .;locus=RLOC_00009727
Chr1	stalkie_big_nohaplotig	exon	98929964	98930157	97	+	.	Parent=Dp_FBgn0245446.mrna8
Chr1	stalkie_big_nohaplotig	CDS	98929964	98930155	.	+	0	Parent=Dp_FBgn0245446.mrna8
Chr1	gffcl	locus	98933752	98934548	.	-	.	ID=RLOC_00009728;geneIDs=comp160994_c6_seq1.path1;transcripts=comp160994_c6_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	98933752	98934548	.	-	.	ID=comp160994_c6_seq1.mrna1;geneID=comp160994_c6_seq1.path1;Name=comp160994_c6_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=784;mismatches=13;indels=0;unknowns=0;Target=comp160994_c6_seq1 797 1 .;CDS_Target=comp160994_c6_seq1 241 116 .;locus=RLOC_00009728
Chr1	stalkie_big_nohaplotig	exon	98933752	98934548	98	-	.	Parent=comp160994_c6_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	98934308	98934433	.	-	0	Parent=comp160994_c6_seq1.mrna1
Chr1	gffcl	locus	98999453	98999953	.	-	.	ID=RLOC_00009731;geneIDs=comp145433_c0_seq1.path1;transcripts=comp145433_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	98999453	98999953	.	-	.	ID=comp145433_c0_seq1.mrna1;geneID=comp145433_c0_seq1.path1;Name=comp145433_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=501;mismatches=0;indels=0;unknowns=0;Target=comp145433_c0_seq1 501 1 .;CDS_Target=comp145433_c0_seq1 164 3 .;locus=RLOC_00009731
Chr1	stalkie_big_nohaplotig	exon	98999453	98999953	100	-	.	Parent=comp145433_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	98999790	98999951	.	-	0	Parent=comp145433_c0_seq1.mrna1
Chr1	gffcl	locus	99001628	99002085	.	+	.	ID=RLOC_00009732;geneIDs=comp530934_c0_seq1.path1;transcripts=comp530934_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	99001628	99002085	.	+	.	ID=comp530934_c0_seq1.mrna1;geneID=comp530934_c0_seq1.path1;Name=comp530934_c0_seq1;Dir=indeterminatecoverage=97.0;identity=100.0;matches=458;mismatches=0;indels=0;unknowns=0;Target=comp530934_c0_seq1 458 1 .;CDS_Target=comp530934_c0_seq1 330 1 .;locus=RLOC_00009732
Chr1	stalkie_big_nohaplotig	exon	99001628	99002085	100	+	.	Parent=comp530934_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	99001628	99001957	.	+	0	Parent=comp530934_c0_seq1.mrna1
Chr1	gffcl	locus	99004125	99004943	.	-	.	ID=RLOC_00009733;geneIDs=comp149760_c0_seq1.path1;transcripts=comp149760_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	99004125	99004943	.	-	.	ID=comp149760_c0_seq1.mrna1;geneID=comp149760_c0_seq1.path1;Name=comp149760_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=819;mismatches=0;indels=0;unknowns=0;Target=comp149760_c0_seq1 819 1 .;CDS_Target=comp149760_c0_seq1 723 634 .;locus=RLOC_00009733
Chr1	stalkie_big_nohaplotig	exon	99004125	99004943	100	-	.	Parent=comp149760_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	99004221	99004310	.	-	0	Parent=comp149760_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	99021498	99024810	.	-	.	ID=comp163775_c1_seq1.mrna1;geneID=comp163775_c1_seq1.path1;Name=comp163775_c1_seq1;Dir=indeterminatecoverage=98.9;identity=96.0;matches=2656;mismatches=109;indels=1;unknowns=0;Target=comp163775_c1_seq1 659 613 .;locus=RLOC_00009734
Chr1	stalkie_big_nohaplotig	exon	99021498	99023649	97	-	.	Parent=comp163775_c1_seq1.mrna1;Target=comp163775_c1_seq1 2840 689 .
Chr1	stalkie_big_nohaplotig	exon	99024134	99024567	91	-	.	Parent=comp163775_c1_seq1.mrna1;Target=comp163775_c1_seq1 659 226 .
Chr1	stalkie_big_nohaplotig	exon	99024632	99024810	88	-	.	Parent=comp163775_c1_seq1.mrna1;Target=comp163775_c1_seq1 210 31 .
Chr1	stalkie_big_nohaplotig	CDS	99024134	99024180	.	-	0	Parent=comp163775_c1_seq1.mrna1
Chr1	gffcl	locus	99063533	99064132	.	+	.	ID=RLOC_00009735;geneIDs=AAEL017299.path1;transcripts=AAEL017299.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	99063533	99064132	.	+	.	ID=AAEL017299.mrna1;geneID=AAEL017299.path1;Name=AAEL017299;Dir=indeterminatecoverage=100.0;identity=100.0;matches=600;mismatches=0;indels=0;unknowns=0;Target=AAEL017299 600 1 .;locus=RLOC_00009735
Chr1	stalkie_big_nohaplotig	exon	99063533	99064132	100	+	.	Parent=AAEL017299.mrna1
Chr1	stalkie_big_nohaplotig	CDS	99063533	99064132	.	+	0	Parent=AAEL017299.mrna1
Chr1	gffcl	locus	99081597	99083018	.	-	.	ID=RLOC_00009736;geneIDs=FBgn0031036.1.path1;transcripts=FBgn0031036.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	99081597	99083018	.	-	.	ID=FBgn0031036.1.mrna1;geneID=FBgn0031036.1.path1;Name=FBgn0031036.1;Dir=sensecoverage=100.0;identity=99.4;matches=1002;mismatches=6;indels=0;unknowns=0;locus=RLOC_00009736
Chr1	stalkie_big_nohaplotig	exon	99081597	99081686	100	-	.	Parent=FBgn0031036.1.mrna1;Target=FBgn0031036.1 919 1008 +
Chr1	stalkie_big_nohaplotig	exon	99081751	99081959	99	-	.	Parent=FBgn0031036.1.mrna1;Target=FBgn0031036.1 710 918 +
Chr1	stalkie_big_nohaplotig	exon	99082020	99082188	100	-	.	Parent=FBgn0031036.1.mrna1;Target=FBgn0031036.1 541 709 +
Chr1	stalkie_big_nohaplotig	exon	99082248	99082346	97	-	.	Parent=FBgn0031036.1.mrna1;Target=FBgn0031036.1 442 540 +
Chr1	stalkie_big_nohaplotig	exon	99082404	99082620	100	-	.	Parent=FBgn0031036.1.mrna1;Target=FBgn0031036.1 225 441 +
Chr1	stalkie_big_nohaplotig	exon	99082699	99082798	98	-	.	Parent=FBgn0031036.1.mrna1;Target=FBgn0031036.1 125 224 +
Chr1	stalkie_big_nohaplotig	exon	99082895	99083018	100	-	.	Parent=FBgn0031036.1.mrna1;Target=FBgn0031036.1 1 124 +
Chr1	stalkie_big_nohaplotig	CDS	99081597	99081686	.	-	0	Parent=FBgn0031036.1.mrna1;Target=FBgn0031036.1 919 1008 +
Chr1	stalkie_big_nohaplotig	CDS	99081751	99081959	.	-	2	Parent=FBgn0031036.1.mrna1;Target=FBgn0031036.1 710 918 +
Chr1	stalkie_big_nohaplotig	CDS	99082020	99082188	.	-	0	Parent=FBgn0031036.1.mrna1;Target=FBgn0031036.1 541 709 +
Chr1	stalkie_big_nohaplotig	CDS	99082248	99082346	.	-	0	Parent=FBgn0031036.1.mrna1;Target=FBgn0031036.1 442 540 +
Chr1	stalkie_big_nohaplotig	CDS	99082404	99082620	.	-	1	Parent=FBgn0031036.1.mrna1;Target=FBgn0031036.1 225 441 +
Chr1	stalkie_big_nohaplotig	CDS	99082699	99082798	.	-	2	Parent=FBgn0031036.1.mrna1;Target=FBgn0031036.1 125 224 +
Chr1	stalkie_big_nohaplotig	CDS	99082895	99083018	.	-	0	Parent=FBgn0031036.1.mrna1;Target=FBgn0031036.1 1 124 +
Chr1	gffcl	locus	99192233	99196292	.	+	.	ID=RLOC_00009740;geneIDs=comp163943_c1_seq1.path2;transcripts=comp163943_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	99192233	99196292	.	+	.	ID=comp163943_c1_seq1.mrna2;geneID=comp163943_c1_seq1.path2;Name=comp163943_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=3880;mismatches=43;indels=39;unknowns=0;Target=comp163943_c1_seq1 377 174 .;locus=RLOC_00009740
Chr1	stalkie_big_nohaplotig	exon	99192233	99194511	98	+	.	Parent=comp163943_c1_seq1.mrna2;Target=comp163943_c1_seq1 2276 1 .
Chr1	stalkie_big_nohaplotig	exon	99194646	99196292	96	+	.	Parent=comp163943_c1_seq1.mrna2;Target=comp163943_c1_seq1 3959 2277 .
Chr1	stalkie_big_nohaplotig	CDS	99192406	99192611	.	+	0	Parent=comp163943_c1_seq1.mrna2
Chr1	gffcl	locus	99205606	99206778	.	-	.	ID=RLOC_00009741;geneIDs=comp152639_c1_seq1.path1;transcripts=comp152639_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	99205606	99206778	.	-	.	ID=comp152639_c1_seq1.mrna1;geneID=comp152639_c1_seq1.path1;Name=comp152639_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1172;mismatches=1;indels=1;unknowns=0;Target=comp152639_c1_seq1 1174 1 .;CDS_Target=comp152639_c1_seq1 221 36 .;locus=RLOC_00009741
Chr1	stalkie_big_nohaplotig	exon	99205606	99206778	99	-	.	Parent=comp152639_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	99206558	99206743	.	-	0	Parent=comp152639_c1_seq1.mrna1
Chr1	gffcl	locus	99235039	99503437	.	+	.	ID=RLOC_00009742;geneIDs=FBgn0000382.1.path1,comp146827_c0_seq1.path1;transcripts=FBgn0000382.1.mrna1,comp146827_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	99235039	99503437	.	+	.	ID=FBgn0000382.1.mrna1;geneID=FBgn0000382.1.path1;Name=FBgn0000382.1;Dir=sensecoverage=96.3;identity=98.8;matches=2154;mismatches=10;indels=17;unknowns=0;locus=RLOC_00009742
Chr1	stalkie_big_nohaplotig	exon	99235039	99235228	100	+	.	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 88 277 +
Chr1	stalkie_big_nohaplotig	exon	99235286	99235412	100	+	.	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 278 404 +
Chr1	stalkie_big_nohaplotig	exon	99324762	99324925	100	+	.	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 405 568 +
Chr1	stalkie_big_nohaplotig	exon	99329008	99329014	100	+	.	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 569 575 +
Chr1	stalkie_big_nohaplotig	exon	99348826	99348832	100	+	.	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 576 582 +
Chr1	stalkie_big_nohaplotig	exon	99380943	99380952	100	+	.	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 595 604 +
Chr1	stalkie_big_nohaplotig	exon	99388206	99388208	100	+	.	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 605 607 +
Chr1	stalkie_big_nohaplotig	exon	99393098	99393100	66	+	.	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 608 610 +
Chr1	stalkie_big_nohaplotig	exon	99395424	99395430	100	+	.	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 611 617 +
Chr1	stalkie_big_nohaplotig	exon	99396874	99396880	100	+	.	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 618 624 +
Chr1	stalkie_big_nohaplotig	exon	99400764	99400793	44	+	.	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 625 671 +
Chr1	stalkie_big_nohaplotig	exon	99407147	99407157	100	+	.	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 687 697 +
Chr1	stalkie_big_nohaplotig	exon	99415854	99415862	100	+	.	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 739 747 +
Chr1	stalkie_big_nohaplotig	exon	99423908	99424025	100	+	.	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 748 865 +
Chr1	stalkie_big_nohaplotig	exon	99424095	99424619	100	+	.	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 866 1390 +
Chr1	stalkie_big_nohaplotig	exon	99424693	99424967	100	+	.	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 1391 1665 +
Chr1	stalkie_big_nohaplotig	exon	99426054	99426144	100	+	.	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 1666 1756 +
Chr1	stalkie_big_nohaplotig	exon	99426207	99426396	100	+	.	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 1757 1946 +
Chr1	stalkie_big_nohaplotig	exon	99502993	99503312	100	+	.	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 1947 2266 +
Chr1	stalkie_big_nohaplotig	exon	99503370	99503437	100	+	.	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 2267 2334 +
Chr1	stalkie_big_nohaplotig	CDS	99424295	99424619	.	+	0	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 1066 1390 +
Chr1	stalkie_big_nohaplotig	CDS	99424693	99424967	.	+	2	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 1391 1665 +
Chr1	stalkie_big_nohaplotig	CDS	99426054	99426144	.	+	0	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 1666 1756 +
Chr1	stalkie_big_nohaplotig	CDS	99426207	99426396	.	+	2	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 1757 1946 +
Chr1	stalkie_big_nohaplotig	CDS	99502993	99503312	.	+	1	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 1947 2266 +
Chr1	stalkie_big_nohaplotig	CDS	99503370	99503437	.	+	2	Parent=FBgn0000382.1.mrna1;Target=FBgn0000382.1 2267 2334 +
Chr1	stalkie_big_nohaplotig	mRNA	99235389	99294147	.	+	.	ID=comp146827_c0_seq1.mrna1;geneID=comp146827_c0_seq1.path1;Name=comp146827_c0_seq1;Dir=sensecoverage=14.0;identity=100.0;matches=70;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009742
Chr1	stalkie_big_nohaplotig	exon	99235389	99235412	100	+	.	Parent=comp146827_c0_seq1.mrna1;Target=comp146827_c0_seq1 1 24 +
Chr1	stalkie_big_nohaplotig	exon	99294102	99294147	100	+	.	Parent=comp146827_c0_seq1.mrna1;Target=comp146827_c0_seq1 25 70 +
Chr1	stalkie_big_nohaplotig	CDS	99235391	99235412	.	+	0	Parent=comp146827_c0_seq1.mrna1;Target=comp146827_c0_seq1 3 24 +
Chr1	stalkie_big_nohaplotig	CDS	99294102	99294147	.	+	2	Parent=comp146827_c0_seq1.mrna1;Target=comp146827_c0_seq1 25 70 +
Chr1	gffcl	locus	99381064	99382494	.	+	.	ID=RLOC_00009743;geneIDs=comp149666_c1_seq1.path1;transcripts=comp149666_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	99381064	99382494	.	+	.	ID=comp149666_c1_seq1.mrna1;geneID=comp149666_c1_seq1.path1;Name=comp149666_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1428;mismatches=3;indels=1;unknowns=0;Target=comp149666_c1_seq1 1432 1 .;CDS_Target=comp149666_c1_seq1 1104 892 .;locus=RLOC_00009743
Chr1	stalkie_big_nohaplotig	exon	99381064	99382494	99	+	.	Parent=comp149666_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	99381954	99382166	.	+	0	Parent=comp149666_c1_seq1.mrna1
Chr1	gffcl	locus	99420945	99421673	.	+	.	ID=RLOC_00009744;geneIDs=comp155983_c0_seq1.path1;transcripts=comp155983_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	99420945	99421673	.	+	.	ID=comp155983_c0_seq1.mrna1;geneID=comp155983_c0_seq1.path1;Name=comp155983_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=724;mismatches=5;indels=2;unknowns=0;Target=comp155983_c0_seq1 731 1 .;CDS_Target=comp155983_c0_seq1 105 1 .;locus=RLOC_00009744
Chr1	stalkie_big_nohaplotig	exon	99420945	99421673	99	+	.	Parent=comp155983_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	99420945	99421049	.	+	0	Parent=comp155983_c0_seq1.mrna1
Chr1	gffcl	locus	99518447	100956850	.	+	.	ID=RLOC_00009747;geneIDs=comp151373_c1_seq1.path1;transcripts=comp151373_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	99518447	100956850	.	+	.	ID=comp151373_c1_seq1.mrna1;geneID=comp151373_c1_seq1.path1;Name=comp151373_c1_seq1;Dir=sensecoverage=100.0;identity=93.4;matches=653;mismatches=46;indels=0;unknowns=0;locus=RLOC_00009747
Chr1	stalkie_big_nohaplotig	exon	99518447	99518740	84	+	.	Parent=comp151373_c1_seq1.mrna1;Target=comp151373_c1_seq1 1 294 +
Chr1	stalkie_big_nohaplotig	exon	100956389	100956666	99	+	.	Parent=comp151373_c1_seq1.mrna1;Target=comp151373_c1_seq1 295 572 +
Chr1	stalkie_big_nohaplotig	exon	100956724	100956850	100	+	.	Parent=comp151373_c1_seq1.mrna1;Target=comp151373_c1_seq1 573 699 +
Chr1	stalkie_big_nohaplotig	CDS	100956519	100956666	.	+	0	Parent=comp151373_c1_seq1.mrna1;Target=comp151373_c1_seq1 425 572 +
Chr1	stalkie_big_nohaplotig	CDS	100956724	100956746	.	+	2	Parent=comp151373_c1_seq1.mrna1;Target=comp151373_c1_seq1 573 595 +
Chr1	gffcl	locus	99600751	99675446	.	-	.	ID=RLOC_00009750;geneIDs=FBgn0020261.1.path1;transcripts=FBgn0020261.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	99600751	99675446	.	-	.	ID=FBgn0020261.1.mrna1;geneID=FBgn0020261.1.path1;Name=FBgn0020261.1;Dir=sensecoverage=73.6;identity=100.0;matches=3248;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009750
Chr1	stalkie_big_nohaplotig	exon	99600751	99600893	100	-	.	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 3106 3248 +
Chr1	stalkie_big_nohaplotig	exon	99600946	99601260	100	-	.	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 2791 3105 +
Chr1	stalkie_big_nohaplotig	exon	99601318	99601550	100	-	.	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 2558 2790 +
Chr1	stalkie_big_nohaplotig	exon	99601633	99601801	100	-	.	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 2389 2557 +
Chr1	stalkie_big_nohaplotig	exon	99601866	99602016	100	-	.	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 2238 2388 +
Chr1	stalkie_big_nohaplotig	exon	99602086	99602354	100	-	.	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 1969 2237 +
Chr1	stalkie_big_nohaplotig	exon	99602408	99602698	100	-	.	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 1678 1968 +
Chr1	stalkie_big_nohaplotig	exon	99602770	99602943	100	-	.	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 1504 1677 +
Chr1	stalkie_big_nohaplotig	exon	99603002	99603194	100	-	.	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 1311 1503 +
Chr1	stalkie_big_nohaplotig	exon	99603249	99603361	100	-	.	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 1198 1310 +
Chr1	stalkie_big_nohaplotig	exon	99673964	99674059	100	-	.	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 1102 1197 +
Chr1	stalkie_big_nohaplotig	exon	99674113	99674246	100	-	.	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 968 1101 +
Chr1	stalkie_big_nohaplotig	exon	99674320	99674761	100	-	.	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 526 967 +
Chr1	stalkie_big_nohaplotig	exon	99674811	99675021	100	-	.	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 315 525 +
Chr1	stalkie_big_nohaplotig	exon	99675077	99675303	100	-	.	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 88 314 +
Chr1	stalkie_big_nohaplotig	exon	99675360	99675446	100	-	.	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 1 87 +
Chr1	stalkie_big_nohaplotig	CDS	99600753	99600893	.	-	0	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 3106 3246 +
Chr1	stalkie_big_nohaplotig	CDS	99600946	99601260	.	-	0	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 2791 3105 +
Chr1	stalkie_big_nohaplotig	CDS	99601318	99601550	.	-	2	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 2558 2790 +
Chr1	stalkie_big_nohaplotig	CDS	99601633	99601801	.	-	0	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 2389 2557 +
Chr1	stalkie_big_nohaplotig	CDS	99601866	99602016	.	-	1	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 2238 2388 +
Chr1	stalkie_big_nohaplotig	CDS	99602086	99602354	.	-	0	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 1969 2237 +
Chr1	stalkie_big_nohaplotig	CDS	99602408	99602698	.	-	0	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 1678 1968 +
Chr1	stalkie_big_nohaplotig	CDS	99602770	99602943	.	-	0	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 1504 1677 +
Chr1	stalkie_big_nohaplotig	CDS	99603002	99603194	.	-	1	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 1311 1503 +
Chr1	stalkie_big_nohaplotig	CDS	99603249	99603361	.	-	0	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 1198 1310 +
Chr1	stalkie_big_nohaplotig	CDS	99673964	99674059	.	-	0	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 1102 1197 +
Chr1	stalkie_big_nohaplotig	CDS	99674113	99674246	.	-	2	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 968 1101 +
Chr1	stalkie_big_nohaplotig	CDS	99674320	99674761	.	-	0	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 526 967 +
Chr1	stalkie_big_nohaplotig	CDS	99674811	99675021	.	-	1	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 315 525 +
Chr1	stalkie_big_nohaplotig	CDS	99675077	99675303	.	-	0	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 88 314 +
Chr1	stalkie_big_nohaplotig	CDS	99675360	99675446	.	-	0	Parent=FBgn0020261.1.mrna1;Target=FBgn0020261.1 1 87 +
Chr1	gffcl	locus	99666597	99666879	.	-	.	ID=RLOC_00009752;geneIDs=comp142563_c0_seq1.path1;transcripts=comp142563_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	99666597	99666879	.	-	.	ID=comp142563_c0_seq1.mrna1;geneID=comp142563_c0_seq1.path1;Name=comp142563_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.8;matches=257;mismatches=23;indels=3;unknowns=0;Target=comp142563_c0_seq1 280 1 .;CDS_Target=comp142563_c0_seq1 204 1 .;locus=RLOC_00009752
Chr1	stalkie_big_nohaplotig	exon	99666597	99666879	90	-	.	Parent=comp142563_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	99666673	99666879	.	-	0	Parent=comp142563_c0_seq1.mrna1
Chr1	gffcl	locus	99728172	99729993	.	+	.	ID=RLOC_00009753;geneIDs=AAEL017571.4.path1;transcripts=AAEL017571.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	99728172	99729993	.	+	.	ID=AAEL017571.4.mrna1;geneID=AAEL017571.4.path1;Name=AAEL017571.4;Dir=indeterminatecoverage=97.3;identity=99.3;matches=1810;mismatches=12;indels=0;unknowns=0;Target=AAEL017571.4 1841 20 .;CDS_Target=AAEL017571.4 1839 22 .;locus=RLOC_00009753
Chr1	stalkie_big_nohaplotig	exon	99728172	99729993	99	+	.	Parent=AAEL017571.4.mrna1
Chr1	stalkie_big_nohaplotig	CDS	99728174	99729991	.	+	0	Parent=AAEL017571.4.mrna1
Chr1	gffcl	locus	99806619	99893537	.	.	.	ID=RLOC_00009754;geneIDs=FBgn0030873.1.path1,FBgn0052533.1.path1,comp135080_c0_seq1.path1;transcripts=FBgn0052533.1.mrna1,FBgn0030873.1.mrna1,comp135080_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	99806619	99893537	.	-	.	ID=FBgn0052533.1.mrna1;geneID=FBgn0052533.1.path1;Name=FBgn0052533.1;Dir=sensecoverage=87.7;identity=100.0;matches=2796;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009754
Chr1	stalkie_big_nohaplotig	exon	99806619	99806626	100	-	.	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 2789 2796 +
Chr1	stalkie_big_nohaplotig	exon	99855449	99855451	100	-	.	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 2786 2788 +
Chr1	stalkie_big_nohaplotig	exon	99862598	99862603	100	-	.	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 2780 2785 +
Chr1	stalkie_big_nohaplotig	exon	99874167	99874168	100	-	.	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 2778 2779 +
Chr1	stalkie_big_nohaplotig	exon	99888837	99889067	100	-	.	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 2547 2777 +
Chr1	stalkie_big_nohaplotig	exon	99889121	99889416	100	-	.	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 2251 2546 +
Chr1	stalkie_big_nohaplotig	exon	99889465	99889744	100	-	.	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 1971 2250 +
Chr1	stalkie_big_nohaplotig	exon	99889802	99889938	100	-	.	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 1834 1970 +
Chr1	stalkie_big_nohaplotig	exon	99891337	99891531	100	-	.	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 1639 1833 +
Chr1	stalkie_big_nohaplotig	exon	99891590	99891787	100	-	.	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 1441 1638 +
Chr1	stalkie_big_nohaplotig	exon	99891838	99892059	100	-	.	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 1219 1440 +
Chr1	stalkie_big_nohaplotig	exon	99892105	99892266	100	-	.	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 1057 1218 +
Chr1	stalkie_big_nohaplotig	exon	99892373	99892711	100	-	.	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 718 1056 +
Chr1	stalkie_big_nohaplotig	exon	99892769	99892935	100	-	.	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 551 717 +
Chr1	stalkie_big_nohaplotig	exon	99892988	99893537	100	-	.	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 1 550 +
Chr1	stalkie_big_nohaplotig	CDS	99806619	99806626	.	-	2	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 2789 2796 +
Chr1	stalkie_big_nohaplotig	CDS	99855449	99855451	.	-	2	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 2786 2788 +
Chr1	stalkie_big_nohaplotig	CDS	99862598	99862603	.	-	2	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 2780 2785 +
Chr1	stalkie_big_nohaplotig	CDS	99874167	99874168	.	-	1	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 2778 2779 +
Chr1	stalkie_big_nohaplotig	CDS	99888837	99889067	.	-	1	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 2547 2777 +
Chr1	stalkie_big_nohaplotig	CDS	99889121	99889416	.	-	0	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 2251 2546 +
Chr1	stalkie_big_nohaplotig	CDS	99889465	99889744	.	-	1	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 1971 2250 +
Chr1	stalkie_big_nohaplotig	CDS	99889802	99889938	.	-	0	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 1834 1970 +
Chr1	stalkie_big_nohaplotig	CDS	99891337	99891531	.	-	0	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 1639 1833 +
Chr1	stalkie_big_nohaplotig	CDS	99891590	99891787	.	-	0	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 1441 1638 +
Chr1	stalkie_big_nohaplotig	CDS	99891838	99892059	.	-	0	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 1219 1440 +
Chr1	stalkie_big_nohaplotig	CDS	99892105	99892266	.	-	0	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 1057 1218 +
Chr1	stalkie_big_nohaplotig	CDS	99892373	99892711	.	-	0	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 718 1056 +
Chr1	stalkie_big_nohaplotig	CDS	99892769	99892935	.	-	2	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 551 717 +
Chr1	stalkie_big_nohaplotig	CDS	99892988	99893537	.	-	0	Parent=FBgn0052533.1.mrna1;Target=FBgn0052533.1 1 550 +
Chr1	stalkie_big_nohaplotig	mRNA	99854580	99855683	.	-	.	ID=FBgn0030873.1.mrna1;geneID=FBgn0030873.1.path1;Name=FBgn0030873.1;Dir=sensecoverage=100.0;identity=99.6;matches=811;mismatches=1;indels=2;unknowns=0;locus=RLOC_00009754
Chr1	stalkie_big_nohaplotig	exon	99854580	99854773	99	-	.	Parent=FBgn0030873.1.mrna1;Target=FBgn0030873.1 619 813 +
Chr1	stalkie_big_nohaplotig	exon	99854829	99855057	100	-	.	Parent=FBgn0030873.1.mrna1;Target=FBgn0030873.1 390 618 +
Chr1	stalkie_big_nohaplotig	exon	99855121	99855219	100	-	.	Parent=FBgn0030873.1.mrna1;Target=FBgn0030873.1 291 389 +
Chr1	stalkie_big_nohaplotig	exon	99855276	99855477	99	-	.	Parent=FBgn0030873.1.mrna1;Target=FBgn0030873.1 90 290 +
Chr1	stalkie_big_nohaplotig	exon	99855531	99855565	100	-	.	Parent=FBgn0030873.1.mrna1;Target=FBgn0030873.1 55 89 +
Chr1	stalkie_big_nohaplotig	exon	99855630	99855683	100	-	.	Parent=FBgn0030873.1.mrna1;Target=FBgn0030873.1 1 54 +
Chr1	stalkie_big_nohaplotig	CDS	99854580	99854773	.	-	0	Parent=FBgn0030873.1.mrna1;Target=FBgn0030873.1 619 813 +
Chr1	stalkie_big_nohaplotig	CDS	99854829	99854987	.	-	0	Parent=FBgn0030873.1.mrna1;Target=FBgn0030873.1 460 618 +
Chr1	stalkie_big_nohaplotig	mRNA	99888116	99888858	.	+	.	ID=comp135080_c0_seq1.mrna1;geneID=comp135080_c0_seq1.path1;Name=comp135080_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=743;mismatches=0;indels=0;unknowns=0;Target=comp135080_c0_seq1 743 1 .;CDS_Target=comp135080_c0_seq1 617 543 .;locus=RLOC_00009754
Chr1	stalkie_big_nohaplotig	exon	99888116	99888858	100	+	.	Parent=comp135080_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	99888658	99888732	.	+	0	Parent=comp135080_c0_seq1.mrna1
Chr1	gffcl	locus	99844860	99845590	.	-	.	ID=RLOC_00009755;geneIDs=comp155983_c0_seq1.path4;transcripts=comp155983_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	99844860	99845590	.	-	.	ID=comp155983_c0_seq1.mrna4;geneID=comp155983_c0_seq1.path4;Name=comp155983_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=723;mismatches=8;indels=0;unknowns=0;Target=comp155983_c0_seq1 731 1 .;CDS_Target=comp155983_c0_seq1 105 1 .;locus=RLOC_00009755
Chr1	stalkie_big_nohaplotig	exon	99844860	99845590	98	-	.	Parent=comp155983_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	99845486	99845590	.	-	0	Parent=comp155983_c0_seq1.mrna4
Chr1	gffcl	locus	99849390	99850120	.	+	.	ID=RLOC_00009756;geneIDs=comp155983_c0_seq1.path2;transcripts=comp155983_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	99849390	99850120	.	+	.	ID=comp155983_c0_seq1.mrna2;geneID=comp155983_c0_seq1.path2;Name=comp155983_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=724;mismatches=7;indels=0;unknowns=0;Target=comp155983_c0_seq1 731 1 .;CDS_Target=comp155983_c0_seq1 105 1 .;locus=RLOC_00009756
Chr1	stalkie_big_nohaplotig	exon	99849390	99850120	99	+	.	Parent=comp155983_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	99849390	99849494	.	+	0	Parent=comp155983_c0_seq1.mrna2
Chr1	gffcl	locus	99896781	99897030	.	+	.	ID=RLOC_00009757;geneIDs=comp140565_c0_seq1.path2;transcripts=comp140565_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	99896781	99897030	.	+	.	ID=comp140565_c0_seq1.mrna2;geneID=comp140565_c0_seq1.path2;Name=comp140565_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=246;mismatches=4;indels=0;unknowns=0;Target=comp140565_c0_seq1 250 1 .;CDS_Target=comp140565_c0_seq1 249 1 .;locus=RLOC_00009757
Chr1	stalkie_big_nohaplotig	exon	99896781	99897030	98	+	.	Parent=comp140565_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	99896781	99897029	.	+	0	Parent=comp140565_c0_seq1.mrna2
Chr1	gffcl	locus	99897351	99897600	.	-	.	ID=RLOC_00009758;geneIDs=comp140565_c0_seq1.path8;transcripts=comp140565_c0_seq1.mrna8
Chr1	stalkie_big_nohaplotig	mRNA	99897351	99897600	.	-	.	ID=comp140565_c0_seq1.mrna8;geneID=comp140565_c0_seq1.path8;Name=comp140565_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=244;mismatches=6;indels=0;unknowns=0;Target=comp140565_c0_seq1 250 1 .;CDS_Target=comp140565_c0_seq1 249 1 .;locus=RLOC_00009758
Chr1	stalkie_big_nohaplotig	exon	99897351	99897600	97	-	.	Parent=comp140565_c0_seq1.mrna8
Chr1	stalkie_big_nohaplotig	CDS	99897352	99897600	.	-	0	Parent=comp140565_c0_seq1.mrna8
Chr1	gffcl	locus	99998908	100162489	.	-	.	ID=RLOC_00009759;geneIDs=FBgn0003068.1.path1,comp152001_c0_seq1.path1;transcripts=FBgn0003068.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	99999077	100162489	.	-	.	ID=FBgn0003068.1.mrna1;geneID=FBgn0003068.1.path1;Name=FBgn0003068.1;Dir=sensecoverage=100.0;identity=99.9;matches=2961;mismatches=0;indels=3;unknowns=0;locus=RLOC_00009759
Chr1	stalkie_big_nohaplotig	exon	99999077	99999136	100	-	.	Parent=FBgn0003068.1.mrna1;Target=FBgn0003068.1 2902 2961 +
Chr1	stalkie_big_nohaplotig	exon	99999199	99999339	100	-	.	Parent=FBgn0003068.1.mrna1;Target=FBgn0003068.1 2761 2901 +
Chr1	stalkie_big_nohaplotig	exon	100074879	100075007	100	-	.	Parent=FBgn0003068.1.mrna1;Target=FBgn0003068.1 2632 2760 +
Chr1	stalkie_big_nohaplotig	exon	100075107	100076419	99	-	.	Parent=FBgn0003068.1.mrna1;Target=FBgn0003068.1 1322 2631 +
Chr1	stalkie_big_nohaplotig	exon	100076478	100076834	100	-	.	Parent=FBgn0003068.1.mrna1;Target=FBgn0003068.1 965 1321 +
Chr1	stalkie_big_nohaplotig	exon	100076889	100077312	100	-	.	Parent=FBgn0003068.1.mrna1;Target=FBgn0003068.1 541 964 +
Chr1	stalkie_big_nohaplotig	exon	100078087	100078178	100	-	.	Parent=FBgn0003068.1.mrna1;Target=FBgn0003068.1 449 540 +
Chr1	stalkie_big_nohaplotig	exon	100078252	100078359	100	-	.	Parent=FBgn0003068.1.mrna1;Target=FBgn0003068.1 341 448 +
Chr1	stalkie_big_nohaplotig	exon	100078425	100078576	100	-	.	Parent=FBgn0003068.1.mrna1;Target=FBgn0003068.1 189 340 +
Chr1	stalkie_big_nohaplotig	exon	100078628	100078714	100	-	.	Parent=FBgn0003068.1.mrna1;Target=FBgn0003068.1 102 188 +
Chr1	stalkie_big_nohaplotig	exon	100162389	100162489	100	-	.	Parent=FBgn0003068.1.mrna1;Target=FBgn0003068.1 1 101 +
Chr1	stalkie_big_nohaplotig	CDS	99999077	99999136	.	-	0	Parent=FBgn0003068.1.mrna1;Target=FBgn0003068.1 2902 2961 +
Chr1	stalkie_big_nohaplotig	CDS	99999199	99999339	.	-	0	Parent=FBgn0003068.1.mrna1;Target=FBgn0003068.1 2761 2901 +
Chr1	stalkie_big_nohaplotig	CDS	100074879	100075007	.	-	0	Parent=FBgn0003068.1.mrna1;Target=FBgn0003068.1 2632 2760 +
Chr1	stalkie_big_nohaplotig	CDS	100075107	100076419	.	-	2	Parent=FBgn0003068.1.mrna1;Target=FBgn0003068.1 1322 2631 +
Chr1	stalkie_big_nohaplotig	CDS	100076478	100076834	.	-	2	Parent=FBgn0003068.1.mrna1;Target=FBgn0003068.1 965 1321 +
Chr1	stalkie_big_nohaplotig	CDS	100076889	100077312	.	-	0	Parent=FBgn0003068.1.mrna1;Target=FBgn0003068.1 541 964 +
Chr1	stalkie_big_nohaplotig	CDS	100078087	100078178	.	-	2	Parent=FBgn0003068.1.mrna1;Target=FBgn0003068.1 449 540 +
Chr1	stalkie_big_nohaplotig	CDS	100078252	100078359	.	-	2	Parent=FBgn0003068.1.mrna1;Target=FBgn0003068.1 341 448 +
Chr1	stalkie_big_nohaplotig	CDS	100078425	100078576	.	-	1	Parent=FBgn0003068.1.mrna1;Target=FBgn0003068.1 189 340 +
Chr1	stalkie_big_nohaplotig	CDS	100078628	100078714	.	-	1	Parent=FBgn0003068.1.mrna1;Target=FBgn0003068.1 102 188 +
Chr1	stalkie_big_nohaplotig	CDS	100162389	100162489	.	-	0	Parent=FBgn0003068.1.mrna1;Target=FBgn0003068.1 1 101 +
Chr1	gffcl	locus	100017276	100693995	.	+	.	ID=RLOC_00009760;geneIDs=Dp_FBgn0250041.1.path1;transcripts=Dp_FBgn0250041.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	100017276	100693995	.	+	.	ID=Dp_FBgn0250041.1.mrna1;geneID=Dp_FBgn0250041.1.path1;Name=Dp_FBgn0250041.1;Dir=sensecoverage=100.0;identity=99.2;matches=1664;mismatches=13;indels=0;unknowns=0;locus=RLOC_00009760
Chr1	stalkie_big_nohaplotig	exon	100017276	100017748	99	+	.	Parent=Dp_FBgn0250041.1.mrna1;Target=Dp_FBgn0250041.1 1 473 +
Chr1	stalkie_big_nohaplotig	exon	100030794	100030798	100	+	.	Parent=Dp_FBgn0250041.1.mrna1;Target=Dp_FBgn0250041.1 474 478 +
Chr1	stalkie_big_nohaplotig	exon	100678607	100678614	75	+	.	Parent=Dp_FBgn0250041.1.mrna1;Target=Dp_FBgn0250041.1 479 486 +
Chr1	stalkie_big_nohaplotig	exon	100692805	100693995	99	+	.	Parent=Dp_FBgn0250041.1.mrna1;Target=Dp_FBgn0250041.1 487 1677 +
Chr1	stalkie_big_nohaplotig	CDS	100017276	100017748	.	+	0	Parent=Dp_FBgn0250041.1.mrna1;Target=Dp_FBgn0250041.1 1 473 +
Chr1	stalkie_big_nohaplotig	CDS	100030794	100030798	.	+	1	Parent=Dp_FBgn0250041.1.mrna1;Target=Dp_FBgn0250041.1 474 478 +
Chr1	stalkie_big_nohaplotig	CDS	100678607	100678614	.	+	2	Parent=Dp_FBgn0250041.1.mrna1;Target=Dp_FBgn0250041.1 479 486 +
Chr1	stalkie_big_nohaplotig	CDS	100692805	100693995	.	+	0	Parent=Dp_FBgn0250041.1.mrna1;Target=Dp_FBgn0250041.1 487 1677 +
Chr1	gffcl	locus	100021006	100021337	.	+	.	ID=RLOC_00009761;geneIDs=comp162442_c1_seq1.path4;transcripts=comp162442_c1_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	100021006	100021337	.	+	.	ID=comp162442_c1_seq1.mrna4;geneID=comp162442_c1_seq1.path4;Name=comp162442_c1_seq1;Dir=indeterminatecoverage=100.0;identity=91.9;matches=305;mismatches=12;indels=15;unknowns=0;Target=comp162442_c1_seq1 317 1 .;CDS_Target=comp162442_c1_seq1 35 3 .;locus=RLOC_00009761
Chr1	stalkie_big_nohaplotig	exon	100021006	100021337	91	+	.	Parent=comp162442_c1_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	100021008	100021040	.	+	0	Parent=comp162442_c1_seq1.mrna4
Chr1	gffcl	locus	100106122	100107606	.	.	.	ID=RLOC_00009763;geneIDs=Dp_FBgn0250556.1.path2,comp162691_c4_seq1.path1;transcripts=Dp_FBgn0250556.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	100106398	100107606	.	-	.	ID=Dp_FBgn0250556.1.mrna2;geneID=Dp_FBgn0250556.1.path2;Name=Dp_FBgn0250556.1;Dir=indeterminatecoverage=80.5;identity=94.8;matches=547;mismatches=20;indels=10;unknowns=0;locus=RLOC_00009763
Chr1	stalkie_big_nohaplotig	exon	100106398	100106674	94	-	.	Parent=Dp_FBgn0250556.1.mrna2;Target=Dp_FBgn0250556.1 704 428 .
Chr1	stalkie_big_nohaplotig	exon	100107317	100107606	94	-	.	Parent=Dp_FBgn0250556.1.mrna2;Target=Dp_FBgn0250556.1 427 128 .
Chr1	stalkie_big_nohaplotig	CDS	100106400	100106674	.	-	2	Parent=Dp_FBgn0250556.1.mrna2;Target=Dp_FBgn0250556.1 702 428 .
Chr1	stalkie_big_nohaplotig	CDS	100107317	100107440	.	-	0	Parent=Dp_FBgn0250556.1.mrna2;Target=Dp_FBgn0250556.1 427 304 .
Chr1	gffcl	locus	100168908	100169939	.	+	.	ID=RLOC_00009764;geneIDs=Dp_FBgn0244711.1.path10;transcripts=Dp_FBgn0244711.1.mrna10
Chr1	stalkie_big_nohaplotig	mRNA	100168908	100169939	.	+	.	ID=Dp_FBgn0244711.1.mrna10;geneID=Dp_FBgn0244711.1.path10;Name=Dp_FBgn0244711.1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1019;mismatches=13;indels=0;unknowns=0;Target=Dp_FBgn0244711.1 1032 1 .;locus=RLOC_00009764
Chr1	stalkie_big_nohaplotig	exon	100168908	100169939	98	+	.	Parent=Dp_FBgn0244711.1.mrna10
Chr1	stalkie_big_nohaplotig	CDS	100168908	100169939	.	+	0	Parent=Dp_FBgn0244711.1.mrna10
Chr1	gffcl	locus	100175274	100175545	.	+	.	ID=RLOC_00009765;geneIDs=comp152481_c0_seq1.path1;transcripts=comp152481_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	100175274	100175545	.	+	.	ID=comp152481_c0_seq1.mrna1;geneID=comp152481_c0_seq1.path1;Name=comp152481_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.8;matches=255;mismatches=6;indels=11;unknowns=0;Target=comp152481_c0_seq1 261 1 .;CDS_Target=comp152481_c0_seq1 191 3 .;locus=RLOC_00009765
Chr1	stalkie_big_nohaplotig	exon	100175274	100175545	93	+	.	Parent=comp152481_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	100175276	100175475	.	+	0	Parent=comp152481_c0_seq1.mrna1
Chr1	gffcl	locus	100316611	100319926	.	+	.	ID=RLOC_00009771;geneIDs=FBgn0035515.1.path2,comp146667_c0_seq1.path1;transcripts=FBgn0035515.1.mrna2,comp146667_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	100316611	100319926	.	+	.	ID=FBgn0035515.1.mrna2;geneID=FBgn0035515.1.path2;Name=FBgn0035515.1;Dir=sensecoverage=96.9;identity=99.5;matches=1272;mismatches=7;indels=0;unknowns=0;locus=RLOC_00009771
Chr1	stalkie_big_nohaplotig	exon	100316611	100316652	100	+	.	Parent=FBgn0035515.1.mrna2;Target=FBgn0035515.1 42 83 +
Chr1	stalkie_big_nohaplotig	exon	100316851	100316956	100	+	.	Parent=FBgn0035515.1.mrna2;Target=FBgn0035515.1 84 189 +
Chr1	stalkie_big_nohaplotig	exon	100317031	100317255	99	+	.	Parent=FBgn0035515.1.mrna2;Target=FBgn0035515.1 190 414 +
Chr1	stalkie_big_nohaplotig	exon	100317335	100317535	99	+	.	Parent=FBgn0035515.1.mrna2;Target=FBgn0035515.1 415 615 +
Chr1	stalkie_big_nohaplotig	exon	100319093	100319302	99	+	.	Parent=FBgn0035515.1.mrna2;Target=FBgn0035515.1 616 825 +
Chr1	stalkie_big_nohaplotig	exon	100319361	100319547	99	+	.	Parent=FBgn0035515.1.mrna2;Target=FBgn0035515.1 826 1012 +
Chr1	stalkie_big_nohaplotig	exon	100319619	100319926	99	+	.	Parent=FBgn0035515.1.mrna2;Target=FBgn0035515.1 1013 1320 +
Chr1	stalkie_big_nohaplotig	CDS	100316611	100316652	.	+	2	Parent=FBgn0035515.1.mrna2;Target=FBgn0035515.1 42 83 +
Chr1	stalkie_big_nohaplotig	CDS	100316851	100316956	.	+	2	Parent=FBgn0035515.1.mrna2;Target=FBgn0035515.1 84 189 +
Chr1	stalkie_big_nohaplotig	CDS	100317031	100317255	.	+	1	Parent=FBgn0035515.1.mrna2;Target=FBgn0035515.1 190 414 +
Chr1	stalkie_big_nohaplotig	CDS	100317335	100317535	.	+	1	Parent=FBgn0035515.1.mrna2;Target=FBgn0035515.1 415 615 +
Chr1	stalkie_big_nohaplotig	CDS	100319093	100319302	.	+	1	Parent=FBgn0035515.1.mrna2;Target=FBgn0035515.1 616 825 +
Chr1	stalkie_big_nohaplotig	CDS	100319361	100319547	.	+	1	Parent=FBgn0035515.1.mrna2;Target=FBgn0035515.1 826 1012 +
Chr1	stalkie_big_nohaplotig	CDS	100319619	100319926	.	+	0	Parent=FBgn0035515.1.mrna2;Target=FBgn0035515.1 1013 1320 +
Chr1	stalkie_big_nohaplotig	mRNA	100317512	100319113	.	+	.	ID=comp146667_c0_seq1.mrna1;geneID=comp146667_c0_seq1.path1;Name=comp146667_c0_seq1;Dir=indeterminatecoverage=100.0;identity=88.7;matches=637;mismatches=44;indels=37;unknowns=0;Target=comp146667_c0_seq1 460 419 .;locus=RLOC_00009771
Chr1	stalkie_big_nohaplotig	exon	100317512	100317911	91	+	.	Parent=comp146667_c0_seq1.mrna1;Target=comp146667_c0_seq1 392 1 .
Chr1	stalkie_big_nohaplotig	exon	100317969	100318066	62	+	.	Parent=comp146667_c0_seq1.mrna1;Target=comp146667_c0_seq1 462 393 .
Chr1	stalkie_big_nohaplotig	exon	100318097	100318174	93	+	.	Parent=comp146667_c0_seq1.mrna1;Target=comp146667_c0_seq1 554 478 .
Chr1	stalkie_big_nohaplotig	exon	100318972	100319113	97	+	.	Parent=comp146667_c0_seq1.mrna1;Target=comp146667_c0_seq1 696 555 .
Chr1	stalkie_big_nohaplotig	CDS	100318023	100318064	.	+	0	Parent=comp146667_c0_seq1.mrna1
Chr1	gffcl	locus	100326402	100329395	.	+	.	ID=RLOC_00009772;geneIDs=FBgn0011692.1.path1;transcripts=FBgn0011692.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	100326402	100329395	.	+	.	ID=FBgn0011692.1.mrna1;geneID=FBgn0011692.1.path1;Name=FBgn0011692.1;Dir=sensecoverage=100.0;identity=99.2;matches=2676;mismatches=21;indels=0;unknowns=0;locus=RLOC_00009772
Chr1	stalkie_big_nohaplotig	exon	100326402	100326439	97	+	.	Parent=FBgn0011692.1.mrna1;Target=FBgn0011692.1 1 38 +
Chr1	stalkie_big_nohaplotig	exon	100326503	100327249	98	+	.	Parent=FBgn0011692.1.mrna1;Target=FBgn0011692.1 39 785 +
Chr1	stalkie_big_nohaplotig	exon	100327309	100327855	99	+	.	Parent=FBgn0011692.1.mrna1;Target=FBgn0011692.1 786 1332 +
Chr1	stalkie_big_nohaplotig	exon	100327916	100328237	99	+	.	Parent=FBgn0011692.1.mrna1;Target=FBgn0011692.1 1333 1654 +
Chr1	stalkie_big_nohaplotig	exon	100328297	100328859	99	+	.	Parent=FBgn0011692.1.mrna1;Target=FBgn0011692.1 1655 2217 +
Chr1	stalkie_big_nohaplotig	exon	100328916	100329395	99	+	.	Parent=FBgn0011692.1.mrna1;Target=FBgn0011692.1 2218 2697 +
Chr1	stalkie_big_nohaplotig	CDS	100326402	100326439	.	+	0	Parent=FBgn0011692.1.mrna1;Target=FBgn0011692.1 1 38 +
Chr1	stalkie_big_nohaplotig	CDS	100326503	100327249	.	+	1	Parent=FBgn0011692.1.mrna1;Target=FBgn0011692.1 39 785 +
Chr1	stalkie_big_nohaplotig	CDS	100327309	100327855	.	+	1	Parent=FBgn0011692.1.mrna1;Target=FBgn0011692.1 786 1332 +
Chr1	stalkie_big_nohaplotig	CDS	100327916	100328237	.	+	0	Parent=FBgn0011692.1.mrna1;Target=FBgn0011692.1 1333 1654 +
Chr1	stalkie_big_nohaplotig	CDS	100328297	100328859	.	+	2	Parent=FBgn0011692.1.mrna1;Target=FBgn0011692.1 1655 2217 +
Chr1	stalkie_big_nohaplotig	CDS	100328916	100329395	.	+	0	Parent=FBgn0011692.1.mrna1;Target=FBgn0011692.1 2218 2697 +
Chr1	gffcl	locus	100345290	100347603	.	+	.	ID=RLOC_00009773;geneIDs=FBgn0036857.1.path1;transcripts=FBgn0036857.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	100345290	100347603	.	+	.	ID=FBgn0036857.1.mrna1;geneID=FBgn0036857.1.path1;Name=FBgn0036857.1;Dir=sensecoverage=100.0;identity=99.6;matches=1677;mismatches=6;indels=0;unknowns=0;locus=RLOC_00009773
Chr1	stalkie_big_nohaplotig	exon	100345290	100345315	100	+	.	Parent=FBgn0036857.1.mrna1;Target=FBgn0036857.1 1 26 +
Chr1	stalkie_big_nohaplotig	exon	100345824	100346481	99	+	.	Parent=FBgn0036857.1.mrna1;Target=FBgn0036857.1 27 684 +
Chr1	stalkie_big_nohaplotig	exon	100346539	100346976	99	+	.	Parent=FBgn0036857.1.mrna1;Target=FBgn0036857.1 685 1122 +
Chr1	stalkie_big_nohaplotig	exon	100347043	100347603	99	+	.	Parent=FBgn0036857.1.mrna1;Target=FBgn0036857.1 1123 1683 +
Chr1	stalkie_big_nohaplotig	CDS	100345290	100345315	.	+	0	Parent=FBgn0036857.1.mrna1;Target=FBgn0036857.1 1 26 +
Chr1	stalkie_big_nohaplotig	CDS	100345824	100346481	.	+	1	Parent=FBgn0036857.1.mrna1;Target=FBgn0036857.1 27 684 +
Chr1	stalkie_big_nohaplotig	CDS	100346539	100346976	.	+	0	Parent=FBgn0036857.1.mrna1;Target=FBgn0036857.1 685 1122 +
Chr1	stalkie_big_nohaplotig	CDS	100347043	100347603	.	+	0	Parent=FBgn0036857.1.mrna1;Target=FBgn0036857.1 1123 1683 +
Chr1	gffcl	locus	100348592	100349377	.	-	.	ID=RLOC_00009774;geneIDs=FBgn0036856.1.path1;transcripts=FBgn0036856.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	100348592	100349377	.	-	.	ID=FBgn0036856.1.mrna1;geneID=FBgn0036856.1.path1;Name=FBgn0036856.1;Dir=sensecoverage=100.0;identity=99.6;matches=675;mismatches=3;indels=0;unknowns=0;locus=RLOC_00009774
Chr1	stalkie_big_nohaplotig	exon	100348592	100348972	99	-	.	Parent=FBgn0036856.1.mrna1;Target=FBgn0036856.1 298 678 +
Chr1	stalkie_big_nohaplotig	exon	100349024	100349155	100	-	.	Parent=FBgn0036856.1.mrna1;Target=FBgn0036856.1 166 297 +
Chr1	stalkie_big_nohaplotig	exon	100349213	100349377	98	-	.	Parent=FBgn0036856.1.mrna1;Target=FBgn0036856.1 1 165 +
Chr1	stalkie_big_nohaplotig	CDS	100348592	100348972	.	-	0	Parent=FBgn0036856.1.mrna1;Target=FBgn0036856.1 298 678 +
Chr1	stalkie_big_nohaplotig	CDS	100349024	100349155	.	-	0	Parent=FBgn0036856.1.mrna1;Target=FBgn0036856.1 166 297 +
Chr1	stalkie_big_nohaplotig	CDS	100349213	100349377	.	-	0	Parent=FBgn0036856.1.mrna1;Target=FBgn0036856.1 1 165 +
Chr1	gffcl	locus	100349381	100350185	.	-	.	ID=RLOC_00009775;geneIDs=FBgn0259720.1.path1;transcripts=FBgn0259720.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	100349381	100350185	.	-	.	ID=FBgn0259720.1.mrna1;geneID=FBgn0259720.1.path1;Name=FBgn0259720.1;Dir=sensecoverage=100.0;identity=99.7;matches=371;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009775
Chr1	stalkie_big_nohaplotig	exon	100349381	100349578	100	-	.	Parent=FBgn0259720.1.mrna1;Target=FBgn0259720.1 175 372 +
Chr1	stalkie_big_nohaplotig	exon	100349635	100349741	100	-	.	Parent=FBgn0259720.1.mrna1;Target=FBgn0259720.1 68 174 +
Chr1	stalkie_big_nohaplotig	exon	100350119	100350185	98	-	.	Parent=FBgn0259720.1.mrna1;Target=FBgn0259720.1 1 67 +
Chr1	stalkie_big_nohaplotig	CDS	100349381	100349578	.	-	0	Parent=FBgn0259720.1.mrna1;Target=FBgn0259720.1 175 372 +
Chr1	stalkie_big_nohaplotig	CDS	100349635	100349741	.	-	2	Parent=FBgn0259720.1.mrna1;Target=FBgn0259720.1 68 174 +
Chr1	stalkie_big_nohaplotig	CDS	100350119	100350185	.	-	0	Parent=FBgn0259720.1.mrna1;Target=FBgn0259720.1 1 67 +
Chr1	gffcl	locus	100351757	100356832	.	+	.	ID=RLOC_00009776;geneIDs=FBgn0035207.1.path1;transcripts=FBgn0035207.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	100351757	100356832	.	+	.	ID=FBgn0035207.1.mrna1;geneID=FBgn0035207.1.path1;Name=FBgn0035207.1;Dir=sensecoverage=100.0;identity=99.7;matches=3169;mismatches=11;indels=0;unknowns=0;locus=RLOC_00009776
Chr1	stalkie_big_nohaplotig	exon	100351757	100351831	100	+	.	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 1 75 +
Chr1	stalkie_big_nohaplotig	exon	100351889	100352072	100	+	.	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 76 259 +
Chr1	stalkie_big_nohaplotig	exon	100352794	100353030	100	+	.	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 260 496 +
Chr1	stalkie_big_nohaplotig	exon	100353086	100353663	99	+	.	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 497 1074 +
Chr1	stalkie_big_nohaplotig	exon	100353726	100353871	100	+	.	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 1075 1220 +
Chr1	stalkie_big_nohaplotig	exon	100353925	100354186	99	+	.	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 1221 1482 +
Chr1	stalkie_big_nohaplotig	exon	100354246	100354560	99	+	.	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 1483 1797 +
Chr1	stalkie_big_nohaplotig	exon	100354626	100354799	99	+	.	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 1798 1971 +
Chr1	stalkie_big_nohaplotig	exon	100354875	100354994	100	+	.	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 1972 2091 +
Chr1	stalkie_big_nohaplotig	exon	100355056	100355193	100	+	.	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 2092 2229 +
Chr1	stalkie_big_nohaplotig	exon	100355542	100356002	99	+	.	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 2230 2690 +
Chr1	stalkie_big_nohaplotig	exon	100356062	100356149	100	+	.	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 2691 2778 +
Chr1	stalkie_big_nohaplotig	exon	100356322	100356459	99	+	.	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 2779 2916 +
Chr1	stalkie_big_nohaplotig	exon	100356510	100356623	100	+	.	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 2917 3030 +
Chr1	stalkie_big_nohaplotig	exon	100356683	100356832	99	+	.	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 3031 3180 +
Chr1	stalkie_big_nohaplotig	CDS	100351757	100351831	.	+	0	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 1 75 +
Chr1	stalkie_big_nohaplotig	CDS	100351889	100352072	.	+	0	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 76 259 +
Chr1	stalkie_big_nohaplotig	CDS	100352794	100353030	.	+	2	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 260 496 +
Chr1	stalkie_big_nohaplotig	CDS	100353086	100353663	.	+	2	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 497 1074 +
Chr1	stalkie_big_nohaplotig	CDS	100353726	100353871	.	+	0	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 1075 1220 +
Chr1	stalkie_big_nohaplotig	CDS	100353925	100354186	.	+	1	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 1221 1482 +
Chr1	stalkie_big_nohaplotig	CDS	100354246	100354560	.	+	0	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 1483 1797 +
Chr1	stalkie_big_nohaplotig	CDS	100354626	100354799	.	+	0	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 1798 1971 +
Chr1	stalkie_big_nohaplotig	CDS	100354875	100354994	.	+	0	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 1972 2091 +
Chr1	stalkie_big_nohaplotig	CDS	100355056	100355193	.	+	0	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 2092 2229 +
Chr1	stalkie_big_nohaplotig	CDS	100355542	100356002	.	+	0	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 2230 2690 +
Chr1	stalkie_big_nohaplotig	CDS	100356062	100356149	.	+	1	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 2691 2778 +
Chr1	stalkie_big_nohaplotig	CDS	100356322	100356459	.	+	0	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 2779 2916 +
Chr1	stalkie_big_nohaplotig	CDS	100356510	100356623	.	+	0	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 2917 3030 +
Chr1	stalkie_big_nohaplotig	CDS	100356683	100356832	.	+	0	Parent=FBgn0035207.1.mrna1;Target=FBgn0035207.1 3031 3180 +
Chr1	gffcl	locus	100358918	100360123	.	+	.	ID=RLOC_00009777;geneIDs=FBgn0035524.1.path1;transcripts=FBgn0035524.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	100358918	100360123	.	+	.	ID=FBgn0035524.1.mrna1;geneID=FBgn0035524.1.path1;Name=FBgn0035524.1;Dir=sensecoverage=100.0;identity=99.4;matches=1071;mismatches=6;indels=0;unknowns=0;locus=RLOC_00009777
Chr1	stalkie_big_nohaplotig	exon	100358918	100359052	99	+	.	Parent=FBgn0035524.1.mrna1;Target=FBgn0035524.1 1 135 +
Chr1	stalkie_big_nohaplotig	exon	100359107	100359902	99	+	.	Parent=FBgn0035524.1.mrna1;Target=FBgn0035524.1 136 931 +
Chr1	stalkie_big_nohaplotig	exon	100359978	100360123	100	+	.	Parent=FBgn0035524.1.mrna1;Target=FBgn0035524.1 932 1077 +
Chr1	stalkie_big_nohaplotig	CDS	100358918	100359052	.	+	0	Parent=FBgn0035524.1.mrna1;Target=FBgn0035524.1 1 135 +
Chr1	stalkie_big_nohaplotig	CDS	100359107	100359902	.	+	0	Parent=FBgn0035524.1.mrna1;Target=FBgn0035524.1 136 931 +
Chr1	stalkie_big_nohaplotig	CDS	100359978	100360123	.	+	2	Parent=FBgn0035524.1.mrna1;Target=FBgn0035524.1 932 1077 +
Chr1	gffcl	locus	100360528	100364592	.	.	.	ID=RLOC_00009778;geneIDs=FBgn0035523.1.path1,comp95051_c0_seq1.path1;transcripts=FBgn0035523.1.mrna1,comp95051_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	100360528	100364592	.	-	.	ID=FBgn0035523.1.mrna1;geneID=FBgn0035523.1.path1;Name=FBgn0035523.1;Dir=sensecoverage=100.0;identity=99.8;matches=2054;mismatches=4;indels=0;unknowns=0;locus=RLOC_00009778
Chr1	stalkie_big_nohaplotig	exon	100360528	100360740	99	-	.	Parent=FBgn0035523.1.mrna1;Target=FBgn0035523.1 1846 2058 +
Chr1	stalkie_big_nohaplotig	exon	100360795	100361016	99	-	.	Parent=FBgn0035523.1.mrna1;Target=FBgn0035523.1 1624 1845 +
Chr1	stalkie_big_nohaplotig	exon	100361085	100361247	99	-	.	Parent=FBgn0035523.1.mrna1;Target=FBgn0035523.1 1461 1623 +
Chr1	stalkie_big_nohaplotig	exon	100361305	100361584	100	-	.	Parent=FBgn0035523.1.mrna1;Target=FBgn0035523.1 1181 1460 +
Chr1	stalkie_big_nohaplotig	exon	100362044	100362329	100	-	.	Parent=FBgn0035523.1.mrna1;Target=FBgn0035523.1 895 1180 +
Chr1	stalkie_big_nohaplotig	exon	100362401	100362630	100	-	.	Parent=FBgn0035523.1.mrna1;Target=FBgn0035523.1 665 894 +
Chr1	stalkie_big_nohaplotig	exon	100362712	100362866	100	-	.	Parent=FBgn0035523.1.mrna1;Target=FBgn0035523.1 510 664 +
Chr1	stalkie_big_nohaplotig	exon	100362940	100363328	100	-	.	Parent=FBgn0035523.1.mrna1;Target=FBgn0035523.1 121 509 +
Chr1	stalkie_big_nohaplotig	exon	100364473	100364592	100	-	.	Parent=FBgn0035523.1.mrna1;Target=FBgn0035523.1 1 120 +
Chr1	stalkie_big_nohaplotig	CDS	100360528	100360740	.	-	0	Parent=FBgn0035523.1.mrna1;Target=FBgn0035523.1 1846 2058 +
Chr1	stalkie_big_nohaplotig	CDS	100360795	100361016	.	-	0	Parent=FBgn0035523.1.mrna1;Target=FBgn0035523.1 1624 1845 +
Chr1	stalkie_big_nohaplotig	CDS	100361085	100361247	.	-	1	Parent=FBgn0035523.1.mrna1;Target=FBgn0035523.1 1461 1623 +
Chr1	stalkie_big_nohaplotig	CDS	100361305	100361584	.	-	2	Parent=FBgn0035523.1.mrna1;Target=FBgn0035523.1 1181 1460 +
Chr1	stalkie_big_nohaplotig	CDS	100362044	100362329	.	-	0	Parent=FBgn0035523.1.mrna1;Target=FBgn0035523.1 895 1180 +
Chr1	stalkie_big_nohaplotig	CDS	100362401	100362630	.	-	2	Parent=FBgn0035523.1.mrna1;Target=FBgn0035523.1 665 894 +
Chr1	stalkie_big_nohaplotig	CDS	100362712	100362866	.	-	1	Parent=FBgn0035523.1.mrna1;Target=FBgn0035523.1 510 664 +
Chr1	stalkie_big_nohaplotig	CDS	100362940	100363328	.	-	0	Parent=FBgn0035523.1.mrna1;Target=FBgn0035523.1 121 509 +
Chr1	stalkie_big_nohaplotig	CDS	100364473	100364592	.	-	0	Parent=FBgn0035523.1.mrna1;Target=FBgn0035523.1 1 120 +
Chr1	stalkie_big_nohaplotig	mRNA	100361536	100361838	.	+	.	ID=comp95051_c0_seq1.mrna1;geneID=comp95051_c0_seq1.path1;Name=comp95051_c0_seq1;Dir=indeterminatecoverage=97.1;identity=99.7;matches=302;mismatches=1;indels=0;unknowns=0;Target=comp95051_c0_seq1 303 1 .;CDS_Target=comp95051_c0_seq1 82 2 .;locus=RLOC_00009778
Chr1	stalkie_big_nohaplotig	exon	100361536	100361838	99	+	.	Parent=comp95051_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	100361537	100361617	.	+	0	Parent=comp95051_c0_seq1.mrna1
Chr1	gffcl	locus	100365734	100366392	.	+	.	ID=RLOC_00009779;geneIDs=FBgn0035520.1.path1;transcripts=FBgn0035520.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	100365734	100366392	.	+	.	ID=FBgn0035520.1.mrna1;geneID=FBgn0035520.1.path1;Name=FBgn0035520.1;Dir=sensecoverage=100.0;identity=99.7;matches=595;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009779
Chr1	stalkie_big_nohaplotig	exon	100365734	100365851	100	+	.	Parent=FBgn0035520.1.mrna1;Target=FBgn0035520.1 1 118 +
Chr1	stalkie_big_nohaplotig	exon	100365914	100366392	99	+	.	Parent=FBgn0035520.1.mrna1;Target=FBgn0035520.1 119 597 +
Chr1	stalkie_big_nohaplotig	CDS	100365734	100365851	.	+	0	Parent=FBgn0035520.1.mrna1;Target=FBgn0035520.1 1 118 +
Chr1	stalkie_big_nohaplotig	CDS	100365914	100366392	.	+	2	Parent=FBgn0035520.1.mrna1;Target=FBgn0035520.1 119 597 +
Chr1	gffcl	locus	100366459	100367221	.	-	.	ID=RLOC_00009780;geneIDs=FBgn0028520.1.path1;transcripts=FBgn0028520.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	100366459	100367221	.	-	.	ID=FBgn0028520.1.mrna1;geneID=FBgn0028520.1.path1;Name=FBgn0028520.1;Dir=sensecoverage=100.0;identity=100.0;matches=603;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009780
Chr1	stalkie_big_nohaplotig	exon	100366459	100366569	100	-	.	Parent=FBgn0028520.1.mrna1;Target=FBgn0028520.1 493 603 +
Chr1	stalkie_big_nohaplotig	exon	100366624	100366738	100	-	.	Parent=FBgn0028520.1.mrna1;Target=FBgn0028520.1 378 492 +
Chr1	stalkie_big_nohaplotig	exon	100366793	100366898	100	-	.	Parent=FBgn0028520.1.mrna1;Target=FBgn0028520.1 272 377 +
Chr1	stalkie_big_nohaplotig	exon	100366951	100367221	100	-	.	Parent=FBgn0028520.1.mrna1;Target=FBgn0028520.1 1 271 +
Chr1	stalkie_big_nohaplotig	CDS	100366459	100366569	.	-	0	Parent=FBgn0028520.1.mrna1;Target=FBgn0028520.1 493 603 +
Chr1	stalkie_big_nohaplotig	CDS	100366624	100366738	.	-	1	Parent=FBgn0028520.1.mrna1;Target=FBgn0028520.1 378 492 +
Chr1	stalkie_big_nohaplotig	CDS	100366793	100366898	.	-	2	Parent=FBgn0028520.1.mrna1;Target=FBgn0028520.1 272 377 +
Chr1	stalkie_big_nohaplotig	CDS	100366951	100367221	.	-	0	Parent=FBgn0028520.1.mrna1;Target=FBgn0028520.1 1 271 +
Chr1	gffcl	locus	100367990	100370024	.	-	.	ID=RLOC_00009781;geneIDs=FBgn0035519.1.path1;transcripts=FBgn0035519.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	100367990	100370024	.	-	.	ID=FBgn0035519.1.mrna1;geneID=FBgn0035519.1.path1;Name=FBgn0035519.1;Dir=sensecoverage=100.0;identity=99.9;matches=1589;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009781
Chr1	stalkie_big_nohaplotig	exon	100367990	100368097	100	-	.	Parent=FBgn0035519.1.mrna1;Target=FBgn0035519.1 1483 1590 +
Chr1	stalkie_big_nohaplotig	exon	100368166	100368430	100	-	.	Parent=FBgn0035519.1.mrna1;Target=FBgn0035519.1 1218 1482 +
Chr1	stalkie_big_nohaplotig	exon	100368495	100368676	100	-	.	Parent=FBgn0035519.1.mrna1;Target=FBgn0035519.1 1036 1217 +
Chr1	stalkie_big_nohaplotig	exon	100368744	100369006	100	-	.	Parent=FBgn0035519.1.mrna1;Target=FBgn0035519.1 773 1035 +
Chr1	stalkie_big_nohaplotig	exon	100369069	100369382	100	-	.	Parent=FBgn0035519.1.mrna1;Target=FBgn0035519.1 459 772 +
Chr1	stalkie_big_nohaplotig	exon	100369443	100369756	99	-	.	Parent=FBgn0035519.1.mrna1;Target=FBgn0035519.1 145 458 +
Chr1	stalkie_big_nohaplotig	exon	100369818	100369871	100	-	.	Parent=FBgn0035519.1.mrna1;Target=FBgn0035519.1 91 144 +
Chr1	stalkie_big_nohaplotig	exon	100369935	100370024	100	-	.	Parent=FBgn0035519.1.mrna1;Target=FBgn0035519.1 1 90 +
Chr1	stalkie_big_nohaplotig	CDS	100367990	100368097	.	-	0	Parent=FBgn0035519.1.mrna1;Target=FBgn0035519.1 1483 1590 +
Chr1	stalkie_big_nohaplotig	CDS	100368166	100368430	.	-	1	Parent=FBgn0035519.1.mrna1;Target=FBgn0035519.1 1218 1482 +
Chr1	stalkie_big_nohaplotig	CDS	100368495	100368676	.	-	0	Parent=FBgn0035519.1.mrna1;Target=FBgn0035519.1 1036 1217 +
Chr1	stalkie_big_nohaplotig	CDS	100368744	100369006	.	-	2	Parent=FBgn0035519.1.mrna1;Target=FBgn0035519.1 773 1035 +
Chr1	stalkie_big_nohaplotig	CDS	100369069	100369382	.	-	1	Parent=FBgn0035519.1.mrna1;Target=FBgn0035519.1 459 772 +
Chr1	stalkie_big_nohaplotig	CDS	100369443	100369756	.	-	0	Parent=FBgn0035519.1.mrna1;Target=FBgn0035519.1 145 458 +
Chr1	stalkie_big_nohaplotig	CDS	100369818	100369871	.	-	0	Parent=FBgn0035519.1.mrna1;Target=FBgn0035519.1 91 144 +
Chr1	stalkie_big_nohaplotig	CDS	100369935	100370024	.	-	0	Parent=FBgn0035519.1.mrna1;Target=FBgn0035519.1 1 90 +
Chr1	gffcl	locus	100373956	100378826	.	+	.	ID=RLOC_00009782;geneIDs=FBgn0035518.1.path1;transcripts=FBgn0035518.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	100373956	100378826	.	+	.	ID=FBgn0035518.1.mrna1;geneID=FBgn0035518.1.path1;Name=FBgn0035518.1;Dir=sensecoverage=100.0;identity=99.2;matches=2513;mismatches=19;indels=0;unknowns=0;locus=RLOC_00009782
Chr1	stalkie_big_nohaplotig	exon	100373956	100374097	100	+	.	Parent=FBgn0035518.1.mrna1;Target=FBgn0035518.1 1 142 +
Chr1	stalkie_big_nohaplotig	exon	100374167	100374762	99	+	.	Parent=FBgn0035518.1.mrna1;Target=FBgn0035518.1 143 738 +
Chr1	stalkie_big_nohaplotig	exon	100374822	100374980	98	+	.	Parent=FBgn0035518.1.mrna1;Target=FBgn0035518.1 739 897 +
Chr1	stalkie_big_nohaplotig	exon	100375045	100375158	100	+	.	Parent=FBgn0035518.1.mrna1;Target=FBgn0035518.1 898 1011 +
Chr1	stalkie_big_nohaplotig	exon	100375219	100375335	100	+	.	Parent=FBgn0035518.1.mrna1;Target=FBgn0035518.1 1012 1128 +
Chr1	stalkie_big_nohaplotig	exon	100376101	100376232	99	+	.	Parent=FBgn0035518.1.mrna1;Target=FBgn0035518.1 1129 1260 +
Chr1	stalkie_big_nohaplotig	exon	100376287	100376495	99	+	.	Parent=FBgn0035518.1.mrna1;Target=FBgn0035518.1 1261 1469 +
Chr1	stalkie_big_nohaplotig	exon	100376557	100376743	97	+	.	Parent=FBgn0035518.1.mrna1;Target=FBgn0035518.1 1470 1656 +
Chr1	stalkie_big_nohaplotig	exon	100377824	100378024	99	+	.	Parent=FBgn0035518.1.mrna1;Target=FBgn0035518.1 1657 1857 +
Chr1	stalkie_big_nohaplotig	exon	100378090	100378344	100	+	.	Parent=FBgn0035518.1.mrna1;Target=FBgn0035518.1 1858 2112 +
Chr1	stalkie_big_nohaplotig	exon	100378407	100378826	98	+	.	Parent=FBgn0035518.1.mrna1;Target=FBgn0035518.1 2113 2532 +
Chr1	stalkie_big_nohaplotig	CDS	100373956	100374097	.	+	0	Parent=FBgn0035518.1.mrna1;Target=FBgn0035518.1 1 142 +
Chr1	stalkie_big_nohaplotig	CDS	100374167	100374762	.	+	2	Parent=FBgn0035518.1.mrna1;Target=FBgn0035518.1 143 738 +
Chr1	stalkie_big_nohaplotig	CDS	100374822	100374980	.	+	0	Parent=FBgn0035518.1.mrna1;Target=FBgn0035518.1 739 897 +
Chr1	stalkie_big_nohaplotig	CDS	100375045	100375158	.	+	0	Parent=FBgn0035518.1.mrna1;Target=FBgn0035518.1 898 1011 +
Chr1	stalkie_big_nohaplotig	CDS	100375219	100375335	.	+	0	Parent=FBgn0035518.1.mrna1;Target=FBgn0035518.1 1012 1128 +
Chr1	stalkie_big_nohaplotig	CDS	100376101	100376232	.	+	0	Parent=FBgn0035518.1.mrna1;Target=FBgn0035518.1 1129 1260 +
Chr1	stalkie_big_nohaplotig	CDS	100376287	100376495	.	+	0	Parent=FBgn0035518.1.mrna1;Target=FBgn0035518.1 1261 1469 +
Chr1	stalkie_big_nohaplotig	CDS	100376557	100376743	.	+	1	Parent=FBgn0035518.1.mrna1;Target=FBgn0035518.1 1470 1656 +
Chr1	stalkie_big_nohaplotig	CDS	100377824	100378024	.	+	0	Parent=FBgn0035518.1.mrna1;Target=FBgn0035518.1 1657 1857 +
Chr1	stalkie_big_nohaplotig	CDS	100378090	100378344	.	+	0	Parent=FBgn0035518.1.mrna1;Target=FBgn0035518.1 1858 2112 +
Chr1	stalkie_big_nohaplotig	CDS	100378407	100378826	.	+	0	Parent=FBgn0035518.1.mrna1;Target=FBgn0035518.1 2113 2532 +
Chr1	gffcl	locus	100379264	100382658	.	-	.	ID=RLOC_00009783;geneIDs=FBgn0035517.1.path1;transcripts=FBgn0035517.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	100379264	100382658	.	-	.	ID=FBgn0035517.1.mrna1;geneID=FBgn0035517.1.path1;Name=FBgn0035517.1;Dir=sensecoverage=100.0;identity=99.9;matches=683;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009783
Chr1	stalkie_big_nohaplotig	exon	100379264	100379391	99	-	.	Parent=FBgn0035517.1.mrna1;Target=FBgn0035517.1 557 684 +
Chr1	stalkie_big_nohaplotig	exon	100379460	100379580	100	-	.	Parent=FBgn0035517.1.mrna1;Target=FBgn0035517.1 436 556 +
Chr1	stalkie_big_nohaplotig	exon	100382172	100382431	100	-	.	Parent=FBgn0035517.1.mrna1;Target=FBgn0035517.1 176 435 +
Chr1	stalkie_big_nohaplotig	exon	100382484	100382658	100	-	.	Parent=FBgn0035517.1.mrna1;Target=FBgn0035517.1 1 175 +
Chr1	stalkie_big_nohaplotig	CDS	100379264	100379391	.	-	2	Parent=FBgn0035517.1.mrna1;Target=FBgn0035517.1 557 684 +
Chr1	stalkie_big_nohaplotig	CDS	100379460	100379580	.	-	0	Parent=FBgn0035517.1.mrna1;Target=FBgn0035517.1 436 556 +
Chr1	stalkie_big_nohaplotig	CDS	100382172	100382431	.	-	2	Parent=FBgn0035517.1.mrna1;Target=FBgn0035517.1 176 435 +
Chr1	stalkie_big_nohaplotig	CDS	100382484	100382658	.	-	0	Parent=FBgn0035517.1.mrna1;Target=FBgn0035517.1 1 175 +
Chr1	stalkie_big_nohaplotig	mRNA	100394898	101107948	.	+	.	ID=FBgn0030249.1.mrna1;geneID=FBgn0030249.1.path1;Name=FBgn0030249.1;Dir=sensecoverage=81.2;identity=98.6;matches=1589;mismatches=10;indels=13;unknowns=0;locus=RLOC_00009784
Chr1	stalkie_big_nohaplotig	exon	100394898	100395296	100	+	.	Parent=FBgn0030249.1.mrna1;Target=FBgn0030249.1 275 673 +
Chr1	stalkie_big_nohaplotig	exon	100536887	100537057	100	+	.	Parent=FBgn0030249.1.mrna1;Target=FBgn0030249.1 674 844 +
Chr1	stalkie_big_nohaplotig	exon	100607817	100608052	100	+	.	Parent=FBgn0030249.1.mrna1;Target=FBgn0030249.1 845 1080 +
Chr1	stalkie_big_nohaplotig	exon	100608102	100608490	100	+	.	Parent=FBgn0030249.1.mrna1;Target=FBgn0030249.1 1081 1469 +
Chr1	stalkie_big_nohaplotig	exon	100608548	100608885	100	+	.	Parent=FBgn0030249.1.mrna1;Target=FBgn0030249.1 1470 1807 +
Chr1	stalkie_big_nohaplotig	exon	101040268	101040284	45	+	.	Parent=FBgn0030249.1.mrna1;Target=FBgn0030249.1 2166 2188 +
Chr1	stalkie_big_nohaplotig	exon	101069427	101069434	100	+	.	Parent=FBgn0030249.1.mrna1;Target=FBgn0030249.1 2189 2196 +
Chr1	stalkie_big_nohaplotig	exon	101090806	101090824	60	+	.	Parent=FBgn0030249.1.mrna1;Target=FBgn0030249.1 2197 2219 +
Chr1	stalkie_big_nohaplotig	exon	101098665	101098672	100	+	.	Parent=FBgn0030249.1.mrna1;Target=FBgn0030249.1 2220 2227 +
Chr1	stalkie_big_nohaplotig	exon	101105866	101105870	100	+	.	Parent=FBgn0030249.1.mrna1;Target=FBgn0030249.1 2228 2232 +
Chr1	stalkie_big_nohaplotig	exon	101107938	101107948	90	+	.	Parent=FBgn0030249.1.mrna1;Target=FBgn0030249.1 2248 2257 +
Chr1	stalkie_big_nohaplotig	CDS	100394900	100395296	.	+	0	Parent=FBgn0030249.1.mrna1;Target=FBgn0030249.1 277 673 +
Chr1	stalkie_big_nohaplotig	CDS	100536887	100537057	.	+	2	Parent=FBgn0030249.1.mrna1;Target=FBgn0030249.1 674 844 +
Chr1	stalkie_big_nohaplotig	CDS	100607817	100608052	.	+	2	Parent=FBgn0030249.1.mrna1;Target=FBgn0030249.1 845 1080 +
Chr1	stalkie_big_nohaplotig	CDS	100608102	100608490	.	+	0	Parent=FBgn0030249.1.mrna1;Target=FBgn0030249.1 1081 1469 +
Chr1	stalkie_big_nohaplotig	CDS	100608548	100608885	.	+	1	Parent=FBgn0030249.1.mrna1;Target=FBgn0030249.1 1470 1807 +
Chr1	stalkie_big_nohaplotig	CDS	101040268	101040284	.	+	2	Parent=FBgn0030249.1.mrna1;Target=FBgn0030249.1 2166 2188 +
Chr1	stalkie_big_nohaplotig	CDS	101069427	101069434	.	+	0	Parent=FBgn0030249.1.mrna1;Target=FBgn0030249.1 2189 2196 +
Chr1	stalkie_big_nohaplotig	CDS	101090806	101090824	.	+	1	Parent=FBgn0030249.1.mrna1;Target=FBgn0030249.1 2197 2219 +
Chr1	stalkie_big_nohaplotig	CDS	101098665	101098672	.	+	0	Parent=FBgn0030249.1.mrna1;Target=FBgn0030249.1 2220 2227 +
Chr1	stalkie_big_nohaplotig	CDS	101105866	101105870	.	+	1	Parent=FBgn0030249.1.mrna1;Target=FBgn0030249.1 2228 2232 +
Chr1	stalkie_big_nohaplotig	CDS	101107938	101107947	.	+	2	Parent=FBgn0030249.1.mrna1;Target=FBgn0030249.1 2248 2256 +
Chr1	stalkie_big_nohaplotig	mRNA	100394901	101130230	.	+	.	ID=comp156132_c1_seq1.mrna1;geneID=comp156132_c1_seq1.path1;Name=comp156132_c1_seq1;Dir=sensecoverage=95.9;identity=98.4;matches=1667;mismatches=14;indels=13;unknowns=0;locus=RLOC_00009784
Chr1	stalkie_big_nohaplotig	exon	100394901	100395296	100	+	.	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 1 396 +
Chr1	stalkie_big_nohaplotig	exon	100536887	100537057	100	+	.	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 397 567 +
Chr1	stalkie_big_nohaplotig	exon	100607817	100608052	100	+	.	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 568 803 +
Chr1	stalkie_big_nohaplotig	exon	100608102	100608490	100	+	.	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 804 1192 +
Chr1	stalkie_big_nohaplotig	exon	100608548	100608885	100	+	.	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 1193 1530 +
Chr1	stalkie_big_nohaplotig	exon	101031653	101031662	100	+	.	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 1791 1800 +
Chr1	stalkie_big_nohaplotig	exon	101040249	101040296	65	+	.	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 1870 1923 +
Chr1	stalkie_big_nohaplotig	exon	101050928	101050935	100	+	.	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 1924 1931 +
Chr1	stalkie_big_nohaplotig	exon	101060690	101060693	100	+	.	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 1976 1979 +
Chr1	stalkie_big_nohaplotig	exon	101070743	101070751	88	+	.	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 1980 1988 +
Chr1	stalkie_big_nohaplotig	exon	101075809	101075817	100	+	.	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 1989 1997 +
Chr1	stalkie_big_nohaplotig	exon	101083824	101083844	76	+	.	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 1998 2013 +
Chr1	stalkie_big_nohaplotig	exon	101100195	101100199	100	+	.	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 2014 2018 +
Chr1	stalkie_big_nohaplotig	exon	101119784	101119793	100	+	.	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 2019 2028 +
Chr1	stalkie_big_nohaplotig	exon	101126926	101126938	100	+	.	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 2049 2061 +
Chr1	stalkie_big_nohaplotig	exon	101129075	101129083	100	+	.	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 2062 2070 +
Chr1	stalkie_big_nohaplotig	exon	101130224	101130230	100	+	.	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 2071 2077 +
Chr1	stalkie_big_nohaplotig	CDS	100394903	100395296	.	+	0	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 3 396 +
Chr1	stalkie_big_nohaplotig	CDS	100536887	100537057	.	+	2	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 397 567 +
Chr1	stalkie_big_nohaplotig	CDS	100607817	100608052	.	+	2	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 568 803 +
Chr1	stalkie_big_nohaplotig	CDS	100608102	100608490	.	+	0	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 804 1192 +
Chr1	stalkie_big_nohaplotig	CDS	100608548	100608885	.	+	1	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 1193 1530 +
Chr1	stalkie_big_nohaplotig	CDS	101031653	101031662	.	+	2	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 1791 1800 +
Chr1	stalkie_big_nohaplotig	CDS	101040249	101040296	.	+	1	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 1870 1923 +
Chr1	stalkie_big_nohaplotig	CDS	101050928	101050935	.	+	1	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 1924 1931 +
Chr1	stalkie_big_nohaplotig	CDS	101060690	101060693	.	+	2	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 1976 1979 +
Chr1	stalkie_big_nohaplotig	CDS	101070743	101070751	.	+	1	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 1980 1988 +
Chr1	stalkie_big_nohaplotig	CDS	101075809	101075817	.	+	1	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 1989 1997 +
Chr1	stalkie_big_nohaplotig	CDS	101083824	101083844	.	+	1	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 1998 2013 +
Chr1	stalkie_big_nohaplotig	CDS	101100195	101100199	.	+	1	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 2014 2018 +
Chr1	stalkie_big_nohaplotig	CDS	101119784	101119793	.	+	2	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 2019 2028 +
Chr1	stalkie_big_nohaplotig	CDS	101126926	101126938	.	+	1	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 2049 2061 +
Chr1	stalkie_big_nohaplotig	CDS	101129075	101129083	.	+	0	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 2062 2070 +
Chr1	stalkie_big_nohaplotig	CDS	101130224	101130228	.	+	0	Parent=comp156132_c1_seq1.mrna1;Target=comp156132_c1_seq1 2071 2075 +
Chr1	stalkie_big_nohaplotig	mRNA	101126461	101303605	.	+	.	ID=comp163540_c0_seq1.mrna1;geneID=comp163540_c0_seq1.path1;Name=comp163540_c0_seq1;Dir=sensecoverage=92.6;identity=92.6;matches=1308;mismatches=50;indels=54;unknowns=0;Target=comp163540_c0_seq1 3 95 +;locus=RLOC_00009784
Chr1	stalkie_big_nohaplotig	exon	101126461	101127719	96	+	.	Parent=comp163540_c0_seq1.mrna1;Target=comp163540_c0_seq1 1 1256 +
Chr1	stalkie_big_nohaplotig	exon	101236593	101236594	100	+	.	Parent=comp163540_c0_seq1.mrna1;Target=comp163540_c0_seq1 1257 1258 +
Chr1	stalkie_big_nohaplotig	exon	101241671	101241674	100	+	.	Parent=comp163540_c0_seq1.mrna1;Target=comp163540_c0_seq1 1259 1262 +
Chr1	stalkie_big_nohaplotig	exon	101248547	101248549	100	+	.	Parent=comp163540_c0_seq1.mrna1;Target=comp163540_c0_seq1 1263 1265 +
Chr1	stalkie_big_nohaplotig	exon	101253594	101253600	100	+	.	Parent=comp163540_c0_seq1.mrna1;Target=comp163540_c0_seq1 1266 1272 +
Chr1	stalkie_big_nohaplotig	exon	101254657	101254661	100	+	.	Parent=comp163540_c0_seq1.mrna1;Target=comp163540_c0_seq1 1273 1277 +
Chr1	stalkie_big_nohaplotig	exon	101259135	101259139	100	+	.	Parent=comp163540_c0_seq1.mrna1;Target=comp163540_c0_seq1 1278 1282 +
Chr1	stalkie_big_nohaplotig	exon	101259945	101260015	30	+	.	Parent=comp163540_c0_seq1.mrna1;Target=comp163540_c0_seq1 1283 1304 +
Chr1	stalkie_big_nohaplotig	exon	101273372	101273374	100	+	.	Parent=comp163540_c0_seq1.mrna1;Target=comp163540_c0_seq1 1305 1307 +
Chr1	stalkie_big_nohaplotig	exon	101274233	101274240	100	+	.	Parent=comp163540_c0_seq1.mrna1;Target=comp163540_c0_seq1 1308 1315 +
Chr1	stalkie_big_nohaplotig	exon	101284165	101284179	80	+	.	Parent=comp163540_c0_seq1.mrna1;Target=comp163540_c0_seq1 1316 1329 +
Chr1	stalkie_big_nohaplotig	exon	101291068	101291076	88	+	.	Parent=comp163540_c0_seq1.mrna1;Target=comp163540_c0_seq1 1330 1338 +
Chr1	stalkie_big_nohaplotig	exon	101295374	101295385	83	+	.	Parent=comp163540_c0_seq1.mrna1;Target=comp163540_c0_seq1 1339 1349 +
Chr1	stalkie_big_nohaplotig	exon	101298966	101298968	100	+	.	Parent=comp163540_c0_seq1.mrna1;Target=comp163540_c0_seq1 1350 1352 +
Chr1	stalkie_big_nohaplotig	exon	101303600	101303605	100	+	.	Parent=comp163540_c0_seq1.mrna1;Target=comp163540_c0_seq1 1353 1358 +
Chr1	stalkie_big_nohaplotig	CDS	101126463	101126555	.	+	0	Parent=comp163540_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	101253118	101254834	.	-	.	ID=comp159708_c1_seq1.mrna1;geneID=comp159708_c1_seq1.path1;Name=comp159708_c1_seq1;Dir=indeterminatecoverage=94.7;identity=100.0;matches=1717;mismatches=0;indels=0;unknowns=0;Target=comp159708_c1_seq1 1732 16 .;CDS_Target=comp159708_c1_seq1 591 379 .;locus=RLOC_00009784
Chr1	stalkie_big_nohaplotig	exon	101253118	101254834	100	-	.	Parent=comp159708_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	101254259	101254471	.	-	0	Parent=comp159708_c1_seq1.mrna1
Chr1	gffcl	locus	100621899	100622002	.	+	.	ID=RLOC_00009786;geneIDs=comp162393_c0_seq1.path2;transcripts=comp162393_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	100621899	100622002	.	+	.	ID=comp162393_c0_seq1.mrna2;geneID=comp162393_c0_seq1.path2;Name=comp162393_c0_seq1;Dir=indeterminatecoverage=9.6;identity=100.0;matches=104;mismatches=0;indels=0;unknowns=0;Target=comp162393_c0_seq1 1080 977 .;locus=RLOC_00009786
Chr1	stalkie_big_nohaplotig	exon	100621899	100622002	100	+	.	Parent=comp162393_c0_seq1.mrna2
Chr1	gffcl	locus	101178254	101230524	.	+	.	ID=RLOC_00009795;geneIDs=comp156477_c1_seq1.path2;transcripts=comp156477_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	101178254	101230524	.	+	.	ID=comp156477_c1_seq1.mrna2;geneID=comp156477_c1_seq1.path2;Name=comp156477_c1_seq1;Dir=indeterminatecoverage=96.3;identity=100.0;matches=1710;mismatches=0;indels=0;unknowns=0;Target=comp156477_c1_seq1 474 232 .;locus=RLOC_00009795
Chr1	stalkie_big_nohaplotig	exon	101178254	101178261	100	+	.	Parent=comp156477_c1_seq1.mrna2;Target=comp156477_c1_seq1 73 66 .
Chr1	stalkie_big_nohaplotig	exon	101184448	101184449	100	+	.	Parent=comp156477_c1_seq1.mrna2;Target=comp156477_c1_seq1 75 74 .
Chr1	stalkie_big_nohaplotig	exon	101188106	101188112	100	+	.	Parent=comp156477_c1_seq1.mrna2;Target=comp156477_c1_seq1 82 76 .
Chr1	stalkie_big_nohaplotig	exon	101202254	101202255	100	+	.	Parent=comp156477_c1_seq1.mrna2;Target=comp156477_c1_seq1 84 83 .
Chr1	stalkie_big_nohaplotig	exon	101228834	101230524	100	+	.	Parent=comp156477_c1_seq1.mrna2;Target=comp156477_c1_seq1 1775 85 .
Chr1	stalkie_big_nohaplotig	CDS	101228981	101229223	.	+	0	Parent=comp156477_c1_seq1.mrna2
Chr1	gffcl	locus	101226198	101228015	.	-	.	ID=RLOC_00009796;geneIDs=FBgn0023507.1.path1;transcripts=FBgn0023507.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	101226198	101228015	.	-	.	ID=FBgn0023507.1.mrna1;geneID=FBgn0023507.1.path1;Name=FBgn0023507.1;Dir=sensecoverage=100.0;identity=100.0;matches=1431;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009796
Chr1	stalkie_big_nohaplotig	exon	101226198	101226445	100	-	.	Parent=FBgn0023507.1.mrna1;Target=FBgn0023507.1 1184 1431 +
Chr1	stalkie_big_nohaplotig	exon	101226515	101226837	100	-	.	Parent=FBgn0023507.1.mrna1;Target=FBgn0023507.1 861 1183 +
Chr1	stalkie_big_nohaplotig	exon	101226895	101227024	100	-	.	Parent=FBgn0023507.1.mrna1;Target=FBgn0023507.1 731 860 +
Chr1	stalkie_big_nohaplotig	exon	101227094	101227262	100	-	.	Parent=FBgn0023507.1.mrna1;Target=FBgn0023507.1 562 730 +
Chr1	stalkie_big_nohaplotig	exon	101227316	101227707	100	-	.	Parent=FBgn0023507.1.mrna1;Target=FBgn0023507.1 170 561 +
Chr1	stalkie_big_nohaplotig	exon	101227774	101227915	100	-	.	Parent=FBgn0023507.1.mrna1;Target=FBgn0023507.1 28 169 +
Chr1	stalkie_big_nohaplotig	exon	101227989	101228015	100	-	.	Parent=FBgn0023507.1.mrna1;Target=FBgn0023507.1 1 27 +
Chr1	stalkie_big_nohaplotig	CDS	101226198	101226445	.	-	2	Parent=FBgn0023507.1.mrna1;Target=FBgn0023507.1 1184 1431 +
Chr1	stalkie_big_nohaplotig	CDS	101226515	101226837	.	-	1	Parent=FBgn0023507.1.mrna1;Target=FBgn0023507.1 861 1183 +
Chr1	stalkie_big_nohaplotig	CDS	101226895	101227024	.	-	2	Parent=FBgn0023507.1.mrna1;Target=FBgn0023507.1 731 860 +
Chr1	stalkie_big_nohaplotig	CDS	101227094	101227262	.	-	0	Parent=FBgn0023507.1.mrna1;Target=FBgn0023507.1 562 730 +
Chr1	stalkie_big_nohaplotig	CDS	101227316	101227707	.	-	2	Parent=FBgn0023507.1.mrna1;Target=FBgn0023507.1 170 561 +
Chr1	stalkie_big_nohaplotig	CDS	101227774	101227915	.	-	0	Parent=FBgn0023507.1.mrna1;Target=FBgn0023507.1 28 169 +
Chr1	stalkie_big_nohaplotig	CDS	101227989	101228015	.	-	0	Parent=FBgn0023507.1.mrna1;Target=FBgn0023507.1 1 27 +
Chr1	gffcl	locus	101228614	101228830	.	-	.	ID=RLOC_00009797;geneIDs=comp555960_c0_seq1.path1;transcripts=comp555960_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	101228614	101228830	.	-	.	ID=comp555960_c0_seq1.mrna1;geneID=comp555960_c0_seq1.path1;Name=comp555960_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=217;mismatches=0;indels=0;unknowns=0;Target=comp555960_c0_seq1 217 1 .;CDS_Target=comp555960_c0_seq1 215 132 .;locus=RLOC_00009797
Chr1	stalkie_big_nohaplotig	exon	101228614	101228830	100	-	.	Parent=comp555960_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	101228616	101228699	.	-	0	Parent=comp555960_c0_seq1.mrna1
Chr1	gffcl	locus	101230759	101232974	.	+	.	ID=RLOC_00009798;geneIDs=comp160976_c7_seq1.path1;transcripts=comp160976_c7_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	101230759	101232974	.	+	.	ID=comp160976_c7_seq1.mrna1;geneID=comp160976_c7_seq1.path1;Name=comp160976_c7_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2216;mismatches=0;indels=0;unknowns=0;Target=comp160976_c7_seq1 2216 1 .;CDS_Target=comp160976_c7_seq1 989 834 .;locus=RLOC_00009798
Chr1	stalkie_big_nohaplotig	exon	101230759	101232974	100	+	.	Parent=comp160976_c7_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	101231592	101231747	.	+	0	Parent=comp160976_c7_seq1.mrna1
Chr1	gffcl	locus	101237638	101241224	.	.	.	ID=RLOC_00009799;geneIDs=Dp_FBgn0249482.1.path1,comp161730_c0_seq1.path1;transcripts=comp161730_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	101237638	101241224	.	+	.	ID=comp161730_c0_seq1.mrna1;geneID=comp161730_c0_seq1.path1;Name=comp161730_c0_seq1;Dir=indeterminatecoverage=97.7;identity=99.9;matches=3584;mismatches=3;indels=2;unknowns=0;Target=comp161730_c0_seq1 3589 1 .;CDS_Target=comp161730_c0_seq1 3438 3103 .;locus=RLOC_00009799
Chr1	stalkie_big_nohaplotig	exon	101237638	101241224	99	+	.	Parent=comp161730_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	101240738	101241073	.	+	0	Parent=comp161730_c0_seq1.mrna1
Chr1	gffcl	locus	101254987	101301764	.	-	.	ID=RLOC_00009800;geneIDs=FBgn0004861.1.path1;transcripts=FBgn0004861.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	101254987	101301764	.	-	.	ID=FBgn0004861.1.mrna1;geneID=FBgn0004861.1.path1;Name=FBgn0004861.1;Dir=sensecoverage=100.0;identity=100.0;matches=3906;mismatches=0;indels=1;unknowns=0;locus=RLOC_00009800
Chr1	stalkie_big_nohaplotig	exon	101254987	101255667	99	-	.	Parent=FBgn0004861.1.mrna1;Target=FBgn0004861.1 3227 3906 +
Chr1	stalkie_big_nohaplotig	exon	101298184	101298480	100	-	.	Parent=FBgn0004861.1.mrna1;Target=FBgn0004861.1 2930 3226 +
Chr1	stalkie_big_nohaplotig	exon	101298558	101299810	100	-	.	Parent=FBgn0004861.1.mrna1;Target=FBgn0004861.1 1677 2929 +
Chr1	stalkie_big_nohaplotig	exon	101299909	101300320	100	-	.	Parent=FBgn0004861.1.mrna1;Target=FBgn0004861.1 1265 1676 +
Chr1	stalkie_big_nohaplotig	exon	101300391	101301042	100	-	.	Parent=FBgn0004861.1.mrna1;Target=FBgn0004861.1 613 1264 +
Chr1	stalkie_big_nohaplotig	exon	101301097	101301695	100	-	.	Parent=FBgn0004861.1.mrna1;Target=FBgn0004861.1 14 612 +
Chr1	stalkie_big_nohaplotig	exon	101301752	101301764	100	-	.	Parent=FBgn0004861.1.mrna1;Target=FBgn0004861.1 1 13 +
Chr1	stalkie_big_nohaplotig	CDS	101254987	101255667	.	-	2	Parent=FBgn0004861.1.mrna1;Target=FBgn0004861.1 3227 3906 +
Chr1	stalkie_big_nohaplotig	CDS	101298184	101298480	.	-	2	Parent=FBgn0004861.1.mrna1;Target=FBgn0004861.1 2930 3226 +
Chr1	stalkie_big_nohaplotig	CDS	101298558	101299810	.	-	1	Parent=FBgn0004861.1.mrna1;Target=FBgn0004861.1 1677 2929 +
Chr1	stalkie_big_nohaplotig	CDS	101299909	101300320	.	-	2	Parent=FBgn0004861.1.mrna1;Target=FBgn0004861.1 1265 1676 +
Chr1	stalkie_big_nohaplotig	CDS	101300391	101301042	.	-	0	Parent=FBgn0004861.1.mrna1;Target=FBgn0004861.1 613 1264 +
Chr1	stalkie_big_nohaplotig	CDS	101301097	101301695	.	-	2	Parent=FBgn0004861.1.mrna1;Target=FBgn0004861.1 14 612 +
Chr1	stalkie_big_nohaplotig	CDS	101301752	101301764	.	-	0	Parent=FBgn0004861.1.mrna1;Target=FBgn0004861.1 1 13 +
Chr1	stalkie_big_nohaplotig	mRNA	101269639	103095566	.	-	.	ID=comp135337_c0_seq1.mrna1;geneID=comp135337_c0_seq1.path1;Name=comp135337_c0_seq1;Dir=indeterminatecoverage=59.6;identity=93.3;matches=500;mismatches=32;indels=4;unknowns=0;Target=comp135337_c0_seq1 149 42 .;locus=RLOC_00009801
Chr1	stalkie_big_nohaplotig	exon	101269639	101269641	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 847 845 .
Chr1	stalkie_big_nohaplotig	exon	101277091	101277093	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 844 842 .
Chr1	stalkie_big_nohaplotig	exon	101280797	101280805	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 834 826 .
Chr1	stalkie_big_nohaplotig	exon	101287875	101287882	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 825 818 .
Chr1	stalkie_big_nohaplotig	exon	101295604	101295605	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 817 816 .
Chr1	stalkie_big_nohaplotig	exon	101302352	101302356	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 815 811 .
Chr1	stalkie_big_nohaplotig	exon	101314100	101314107	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 761 754 .
Chr1	stalkie_big_nohaplotig	exon	101318920	101318930	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 751 741 .
Chr1	stalkie_big_nohaplotig	exon	101325085	101325089	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 740 736 .
Chr1	stalkie_big_nohaplotig	exon	101330865	101330872	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 720 713 .
Chr1	stalkie_big_nohaplotig	exon	101330898	101330905	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 696 689 .
Chr1	stalkie_big_nohaplotig	exon	101336027	101336037	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 659 649 .
Chr1	stalkie_big_nohaplotig	exon	101336922	101336930	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 642 634 .
Chr1	stalkie_big_nohaplotig	exon	101342494	101342497	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 633 630 .
Chr1	stalkie_big_nohaplotig	exon	101345877	101345888	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 629 618 .
Chr1	stalkie_big_nohaplotig	exon	101347227	101347232	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 617 612 .
Chr1	stalkie_big_nohaplotig	exon	101348517	101348525	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 611 603 .
Chr1	stalkie_big_nohaplotig	exon	101351632	101351635	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 602 599 .
Chr1	stalkie_big_nohaplotig	exon	101351675	101351682	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 566 559 .
Chr1	stalkie_big_nohaplotig	exon	101353664	101353672	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 555 547 .
Chr1	stalkie_big_nohaplotig	exon	101353700	101353708	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 518 510 .
Chr1	stalkie_big_nohaplotig	exon	101360821	101360824	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 509 506 .
Chr1	stalkie_big_nohaplotig	exon	101379259	101379262	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 504 501 .
Chr1	stalkie_big_nohaplotig	exon	101379274	101379282	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 474 466 .
Chr1	stalkie_big_nohaplotig	exon	101379882	101379886	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 465 461 .
Chr1	stalkie_big_nohaplotig	exon	101381387	101381392	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 460 455 .
Chr1	stalkie_big_nohaplotig	exon	101381430	101381439	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 451 442 .
Chr1	stalkie_big_nohaplotig	exon	101399739	101399747	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 440 432 .
Chr1	stalkie_big_nohaplotig	exon	101404212	101404215	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 431 428 .
Chr1	stalkie_big_nohaplotig	exon	101404795	101404801	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 427 421 .
Chr1	stalkie_big_nohaplotig	exon	101406263	101406270	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 420 413 .
Chr1	stalkie_big_nohaplotig	exon	101412469	101412477	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 409 401 .
Chr1	stalkie_big_nohaplotig	exon	101412506	101412514	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 351 343 .
Chr1	stalkie_big_nohaplotig	exon	101422022	101422023	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 342 341 .
Chr1	stalkie_big_nohaplotig	exon	101431719	101431723	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 340 336 .
Chr1	stalkie_big_nohaplotig	exon	101433624	101433632	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 335 327 .
Chr1	stalkie_big_nohaplotig	exon	101441796	101441797	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 326 325 .
Chr1	stalkie_big_nohaplotig	exon	101442004	101442007	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 324 321 .
Chr1	stalkie_big_nohaplotig	exon	101442020	101442027	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 314 307 .
Chr1	stalkie_big_nohaplotig	exon	101444416	101444425	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 306 297 .
Chr1	stalkie_big_nohaplotig	exon	101445030	101445036	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 296 290 .
Chr1	stalkie_big_nohaplotig	exon	101452631	101452632	100	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 289 288 .
Chr1	stalkie_big_nohaplotig	exon	103095320	103095566	85	-	.	Parent=comp135337_c0_seq1.mrna1;Target=comp135337_c0_seq1 287 41 .
Chr1	stalkie_big_nohaplotig	CDS	103095458	103095565	.	-	0	Parent=comp135337_c0_seq1.mrna1
Chr1	gffcl	locus	101292689	102361371	.	+	.	ID=RLOC_00009802;geneIDs=comp161300_c0_seq1.path1;transcripts=comp161300_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	101292689	102361371	.	+	.	ID=comp161300_c0_seq1.mrna1;geneID=comp161300_c0_seq1.path1;Name=comp161300_c0_seq1;Dir=indeterminatecoverage=77.8;identity=99.6;matches=720;mismatches=3;indels=0;unknowns=0;locus=RLOC_00009802
Chr1	stalkie_big_nohaplotig	exon	101292689	101292793	97	+	.	Parent=comp161300_c0_seq1.mrna1;Target=comp161300_c0_seq1 311 207 .
Chr1	stalkie_big_nohaplotig	exon	102360754	102361371	100	+	.	Parent=comp161300_c0_seq1.mrna1;Target=comp161300_c0_seq1 929 312 .
Chr1	stalkie_big_nohaplotig	CDS	101292691	101292793	.	+	0	Parent=comp161300_c0_seq1.mrna1;Target=comp161300_c0_seq1 311 209 .
Chr1	stalkie_big_nohaplotig	CDS	102360754	102360803	.	+	2	Parent=comp161300_c0_seq1.mrna1;Target=comp161300_c0_seq1 361 312 .
Chr1	gffcl	locus	101304327	101305373	.	-	.	ID=RLOC_00009803;geneIDs=comp118115_c0_seq1.path1;transcripts=comp118115_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	101304327	101305373	.	-	.	ID=comp118115_c0_seq1.mrna1;geneID=comp118115_c0_seq1.path1;Name=comp118115_c0_seq1;Dir=indeterminatecoverage=84.7;identity=99.3;matches=982;mismatches=7;indels=0;unknowns=0;Target=comp118115_c0_seq1 1130 975 .;locus=RLOC_00009803
Chr1	stalkie_big_nohaplotig	exon	101304327	101304738	100	-	.	Parent=comp118115_c0_seq1.mrna1;Target=comp118115_c0_seq1 1168 757 .
Chr1	stalkie_big_nohaplotig	exon	101304797	101305373	98	-	.	Parent=comp118115_c0_seq1.mrna1;Target=comp118115_c0_seq1 756 180 .
Chr1	stalkie_big_nohaplotig	CDS	101304365	101304520	.	-	0	Parent=comp118115_c0_seq1.mrna1
Chr1	gffcl	locus	101325828	101326538	.	+	.	ID=RLOC_00009804;geneIDs=Dp_FBgn0250603.path8;transcripts=Dp_FBgn0250603.mrna8
Chr1	stalkie_big_nohaplotig	mRNA	101325828	101326538	.	+	.	ID=Dp_FBgn0250603.mrna8;geneID=Dp_FBgn0250603.path8;Name=Dp_FBgn0250603;Dir=indeterminatecoverage=100.0;identity=98.5;matches=700;mismatches=11;indels=0;unknowns=0;Target=Dp_FBgn0250603 711 1 .;CDS_Target=Dp_FBgn0250603 711 40 .;locus=RLOC_00009804
Chr1	stalkie_big_nohaplotig	exon	101325828	101326538	98	+	.	Parent=Dp_FBgn0250603.mrna8
Chr1	stalkie_big_nohaplotig	CDS	101325867	101326538	.	+	0	Parent=Dp_FBgn0250603.mrna8
Chr1	gffcl	locus	101364470	101367192	.	-	.	ID=RLOC_00009805;geneIDs=comp152074_c2_seq1.path1;transcripts=comp152074_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	101364470	101367192	.	-	.	ID=comp152074_c2_seq1.mrna1;geneID=comp152074_c2_seq1.path1;Name=comp152074_c2_seq1;Dir=indeterminatecoverage=97.7;identity=100.0;matches=2723;mismatches=0;indels=0;unknowns=0;Target=comp152074_c2_seq1 2723 1 .;CDS_Target=comp152074_c2_seq1 2243 2055 .;locus=RLOC_00009805
Chr1	stalkie_big_nohaplotig	exon	101364470	101367192	100	-	.	Parent=comp152074_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	101364950	101365138	.	-	0	Parent=comp152074_c2_seq1.mrna1
Chr1	gffcl	locus	101460603	101645338	.	-	.	ID=RLOC_00009807;geneIDs=comp161632_c0_seq1.path2;transcripts=comp161632_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	101460603	101645338	.	-	.	ID=comp161632_c0_seq1.mrna2;geneID=comp161632_c0_seq1.path2;Name=comp161632_c0_seq1;Dir=indeterminatecoverage=36.2;identity=83.1;matches=597;mismatches=63;indels=58;unknowns=0;locus=RLOC_00009807
Chr1	stalkie_big_nohaplotig	exon	101460603	101460709	96	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2623 2517 .
Chr1	stalkie_big_nohaplotig	exon	101476622	101476665	57	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2500 2455 .
Chr1	stalkie_big_nohaplotig	exon	101489285	101489293	100	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2450 2442 .
Chr1	stalkie_big_nohaplotig	exon	101493194	101493199	100	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2441 2436 .
Chr1	stalkie_big_nohaplotig	exon	101498352	101498359	100	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2426 2419 .
Chr1	stalkie_big_nohaplotig	exon	101504676	101504678	100	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2418 2416 .
Chr1	stalkie_big_nohaplotig	exon	101504706	101504710	100	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2355 2351 .
Chr1	stalkie_big_nohaplotig	exon	101506432	101506434	100	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2350 2348 .
Chr1	stalkie_big_nohaplotig	exon	101507661	101507662	100	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2347 2346 .
Chr1	stalkie_big_nohaplotig	exon	101513219	101513245	65	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2345 2308 .
Chr1	stalkie_big_nohaplotig	exon	101516093	101516098	100	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2307 2302 .
Chr1	stalkie_big_nohaplotig	exon	101525158	101525163	100	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2301 2296 .
Chr1	stalkie_big_nohaplotig	exon	101553894	101553904	100	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2193 2183 .
Chr1	stalkie_big_nohaplotig	exon	101567758	101567760	100	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2182 2180 .
Chr1	stalkie_big_nohaplotig	exon	101595294	101595297	100	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2179 2176 .
Chr1	stalkie_big_nohaplotig	exon	101597335	101597340	100	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2175 2170 .
Chr1	stalkie_big_nohaplotig	exon	101604515	101604520	100	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2169 2164 .
Chr1	stalkie_big_nohaplotig	exon	101606602	101606606	100	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2163 2159 .
Chr1	stalkie_big_nohaplotig	exon	101621272	101621279	100	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2158 2151 .
Chr1	stalkie_big_nohaplotig	exon	101633563	101633570	100	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2150 2143 .
Chr1	stalkie_big_nohaplotig	exon	101638108	101638116	100	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2083 2075 .
Chr1	stalkie_big_nohaplotig	exon	101644459	101644465	100	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2074 2068 .
Chr1	stalkie_big_nohaplotig	exon	101644853	101645063	75	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 2067 1861 .
Chr1	stalkie_big_nohaplotig	exon	101645168	101645338	84	-	.	Parent=comp161632_c0_seq1.mrna2;Target=comp161632_c0_seq1 1860 1675 .
Chr1	gffcl	locus	101509504	101510170	.	+	.	ID=RLOC_00009809;geneIDs=FBgn0013432.1.path1;transcripts=FBgn0013432.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	101509504	101510170	.	+	.	ID=FBgn0013432.1.mrna1;geneID=FBgn0013432.1.path1;Name=FBgn0013432.1;Dir=sensecoverage=100.0;identity=100.0;matches=267;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009809
Chr1	stalkie_big_nohaplotig	exon	101509504	101509589	100	+	.	Parent=FBgn0013432.1.mrna1;Target=FBgn0013432.1 1 86 +
Chr1	stalkie_big_nohaplotig	exon	101509646	101509763	100	+	.	Parent=FBgn0013432.1.mrna1;Target=FBgn0013432.1 87 204 +
Chr1	stalkie_big_nohaplotig	exon	101510108	101510170	100	+	.	Parent=FBgn0013432.1.mrna1;Target=FBgn0013432.1 205 267 +
Chr1	stalkie_big_nohaplotig	CDS	101509504	101509589	.	+	0	Parent=FBgn0013432.1.mrna1;Target=FBgn0013432.1 1 86 +
Chr1	stalkie_big_nohaplotig	CDS	101509646	101509763	.	+	1	Parent=FBgn0013432.1.mrna1;Target=FBgn0013432.1 87 204 +
Chr1	stalkie_big_nohaplotig	CDS	101510108	101510170	.	+	0	Parent=FBgn0013432.1.mrna1;Target=FBgn0013432.1 205 267 +
Chr1	gffcl	locus	101510429	102292889	.	-	.	ID=RLOC_00009810;geneIDs=FBgn0004654.1.path1,comp66821_c0_seq1.path1,comp128622_c0_seq1.path1;transcripts=FBgn0004654.1.mrna1,comp128622_c0_seq1.mrna1,comp66821_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	101510429	101512604	.	-	.	ID=FBgn0004654.1.mrna1;geneID=FBgn0004654.1.path1;Name=FBgn0004654.1;Dir=sensecoverage=100.0;identity=100.0;matches=1458;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009810
Chr1	stalkie_big_nohaplotig	exon	101510429	101510768	100	-	.	Parent=FBgn0004654.1.mrna1;Target=FBgn0004654.1 1119 1458 +
Chr1	stalkie_big_nohaplotig	exon	101510821	101511691	100	-	.	Parent=FBgn0004654.1.mrna1;Target=FBgn0004654.1 248 1118 +
Chr1	stalkie_big_nohaplotig	exon	101512193	101512307	100	-	.	Parent=FBgn0004654.1.mrna1;Target=FBgn0004654.1 133 247 +
Chr1	stalkie_big_nohaplotig	exon	101512361	101512469	100	-	.	Parent=FBgn0004654.1.mrna1;Target=FBgn0004654.1 24 132 +
Chr1	stalkie_big_nohaplotig	exon	101512582	101512604	100	-	.	Parent=FBgn0004654.1.mrna1;Target=FBgn0004654.1 1 23 +
Chr1	stalkie_big_nohaplotig	CDS	101510429	101510768	.	-	1	Parent=FBgn0004654.1.mrna1;Target=FBgn0004654.1 1119 1458 +
Chr1	stalkie_big_nohaplotig	CDS	101510821	101511691	.	-	2	Parent=FBgn0004654.1.mrna1;Target=FBgn0004654.1 248 1118 +
Chr1	stalkie_big_nohaplotig	CDS	101512193	101512307	.	-	0	Parent=FBgn0004654.1.mrna1;Target=FBgn0004654.1 133 247 +
Chr1	stalkie_big_nohaplotig	CDS	101512361	101512469	.	-	1	Parent=FBgn0004654.1.mrna1;Target=FBgn0004654.1 24 132 +
Chr1	stalkie_big_nohaplotig	CDS	101512582	101512604	.	-	0	Parent=FBgn0004654.1.mrna1;Target=FBgn0004654.1 1 23 +
Chr1	stalkie_big_nohaplotig	mRNA	101511624	102292889	.	-	.	ID=comp128622_c0_seq1.mrna1;geneID=comp128622_c0_seq1.path1;Name=comp128622_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.4;matches=305;mismatches=14;indels=4;unknowns=0;locus=RLOC_00009810
Chr1	stalkie_big_nohaplotig	exon	101511624	101511861	98	-	.	Parent=comp128622_c0_seq1.mrna1;Target=comp128622_c0_seq1 378 141 .
Chr1	stalkie_big_nohaplotig	exon	101511892	101511899	100	-	.	Parent=comp128622_c0_seq1.mrna1;Target=comp128622_c0_seq1 103 96 .
Chr1	stalkie_big_nohaplotig	exon	101535913	101535917	100	-	.	Parent=comp128622_c0_seq1.mrna1;Target=comp128622_c0_seq1 95 91 .
Chr1	stalkie_big_nohaplotig	exon	102292822	102292889	79	-	.	Parent=comp128622_c0_seq1.mrna1;Target=comp128622_c0_seq1 72 1 .
Chr1	stalkie_big_nohaplotig	CDS	101511898	101511899	.	-	0	Parent=comp128622_c0_seq1.mrna1;Target=comp128622_c0_seq1 97 96 .
Chr1	stalkie_big_nohaplotig	CDS	101535913	101535917	.	-	2	Parent=comp128622_c0_seq1.mrna1;Target=comp128622_c0_seq1 95 91 .
Chr1	stalkie_big_nohaplotig	CDS	102292822	102292888	.	-	0	Parent=comp128622_c0_seq1.mrna1;Target=comp128622_c0_seq1 72 2 .
Chr1	stalkie_big_nohaplotig	mRNA	101511932	101512216	.	-	.	ID=comp66821_c0_seq1.mrna1;geneID=comp66821_c0_seq1.path1;Name=comp66821_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=285;mismatches=0;indels=0;unknowns=0;Target=comp66821_c0_seq1 285 1 .;CDS_Target=comp66821_c0_seq1 124 38 .;locus=RLOC_00009810
Chr1	stalkie_big_nohaplotig	exon	101511932	101512216	100	-	.	Parent=comp66821_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	101512093	101512179	.	-	0	Parent=comp66821_c0_seq1.mrna1
Chr1	gffcl	locus	101520928	101521177	.	+	.	ID=RLOC_00009811;geneIDs=comp140565_c0_seq1.path3;transcripts=comp140565_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	101520928	101521177	.	+	.	ID=comp140565_c0_seq1.mrna3;geneID=comp140565_c0_seq1.path3;Name=comp140565_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=246;mismatches=4;indels=0;unknowns=0;Target=comp140565_c0_seq1 250 1 .;CDS_Target=comp140565_c0_seq1 249 1 .;locus=RLOC_00009811
Chr1	stalkie_big_nohaplotig	exon	101520928	101521177	98	+	.	Parent=comp140565_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	101520928	101521176	.	+	0	Parent=comp140565_c0_seq1.mrna3
Chr1	gffcl	locus	101522576	101523401	.	-	.	ID=RLOC_00009812;geneIDs=comp151889_c0_seq1.path1;transcripts=comp151889_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	101522576	101523401	.	-	.	ID=comp151889_c0_seq1.mrna1;geneID=comp151889_c0_seq1.path1;Name=comp151889_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=825;mismatches=1;indels=10;unknowns=0;Target=comp151889_c0_seq1 836 1 .;CDS_Target=comp151889_c0_seq1 834 607 .;locus=RLOC_00009812
Chr1	stalkie_big_nohaplotig	exon	101522576	101523401	98	-	.	Parent=comp151889_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	101522578	101522795	.	-	0	Parent=comp151889_c0_seq1.mrna1
Chr1	gffcl	locus	101523416	101523879	.	-	.	ID=RLOC_00009813;geneIDs=comp149583_c0_seq1.path2;transcripts=comp149583_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	101523416	101523879	.	-	.	ID=comp149583_c0_seq1.mrna2;geneID=comp149583_c0_seq1.path2;Name=comp149583_c0_seq1;Dir=sensecoverage=100.0;identity=96.7;matches=385;mismatches=13;indels=0;unknowns=0;locus=RLOC_00009813
Chr1	stalkie_big_nohaplotig	exon	101523416	101523563	100	-	.	Parent=comp149583_c0_seq1.mrna2;Target=comp149583_c0_seq1 251 398 +
Chr1	stalkie_big_nohaplotig	exon	101523630	101523879	94	-	.	Parent=comp149583_c0_seq1.mrna2;Target=comp149583_c0_seq1 1 250 +
Chr1	stalkie_big_nohaplotig	CDS	101523493	101523563	.	-	2	Parent=comp149583_c0_seq1.mrna2;Target=comp149583_c0_seq1 251 321 +
Chr1	stalkie_big_nohaplotig	CDS	101523630	101523879	.	-	0	Parent=comp149583_c0_seq1.mrna2;Target=comp149583_c0_seq1 1 250 +
Chr1	gffcl	locus	101545025	101567655	.	-	.	ID=RLOC_00009814;geneIDs=FBgn0040348.1.path1;transcripts=FBgn0040348.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	101545025	101567655	.	-	.	ID=FBgn0040348.1.mrna1;geneID=FBgn0040348.1.path1;Name=FBgn0040348.1;Dir=sensecoverage=92.3;identity=100.0;matches=2228;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009814
Chr1	stalkie_big_nohaplotig	exon	101545025	101545879	100	-	.	Parent=FBgn0040348.1.mrna1;Target=FBgn0040348.1 1374 2228 +
Chr1	stalkie_big_nohaplotig	exon	101545938	101546692	100	-	.	Parent=FBgn0040348.1.mrna1;Target=FBgn0040348.1 619 1373 +
Chr1	stalkie_big_nohaplotig	exon	101567038	101567655	100	-	.	Parent=FBgn0040348.1.mrna1;Target=FBgn0040348.1 1 618 +
Chr1	stalkie_big_nohaplotig	CDS	101545027	101545879	.	-	1	Parent=FBgn0040348.1.mrna1;Target=FBgn0040348.1 1374 2226 +
Chr1	stalkie_big_nohaplotig	CDS	101545938	101546692	.	-	0	Parent=FBgn0040348.1.mrna1;Target=FBgn0040348.1 619 1373 +
Chr1	stalkie_big_nohaplotig	CDS	101567038	101567655	.	-	0	Parent=FBgn0040348.1.mrna1;Target=FBgn0040348.1 1 618 +
Chr1	gffcl	locus	101548941	101551033	.	-	.	ID=RLOC_00009815;geneIDs=comp156281_c1_seq1.path1;transcripts=comp156281_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	101548941	101551033	.	-	.	ID=comp156281_c1_seq1.mrna1;geneID=comp156281_c1_seq1.path1;Name=comp156281_c1_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=2040;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009815
Chr1	stalkie_big_nohaplotig	exon	101548941	101549572	100	-	.	Parent=comp156281_c1_seq1.mrna1;Target=comp156281_c1_seq1 1411 2042 +
Chr1	stalkie_big_nohaplotig	exon	101549624	101551033	99	-	.	Parent=comp156281_c1_seq1.mrna1;Target=comp156281_c1_seq1 1 1410 +
Chr1	stalkie_big_nohaplotig	CDS	101549494	101549572	.	-	1	Parent=comp156281_c1_seq1.mrna1;Target=comp156281_c1_seq1 1411 1489 +
Chr1	stalkie_big_nohaplotig	CDS	101549624	101549994	.	-	0	Parent=comp156281_c1_seq1.mrna1;Target=comp156281_c1_seq1 1040 1410 +
Chr1	gffcl	locus	101577013	101578002	.	-	.	ID=RLOC_00009816;geneIDs=ORF1822.path1;transcripts=ORF1822.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	101577013	101578002	.	-	.	ID=ORF1822.mrna1;geneID=ORF1822.path1;Name=ORF1822;Dir=indeterminatecoverage=100.0;identity=99.4;matches=984;mismatches=6;indels=0;unknowns=0;Target=ORF1822 990 1 .;locus=RLOC_00009816
Chr1	stalkie_big_nohaplotig	exon	101577013	101578002	99	-	.	Parent=ORF1822.mrna1
Chr1	stalkie_big_nohaplotig	CDS	101577013	101578002	.	-	0	Parent=ORF1822.mrna1
Chr1	gffcl	locus	101586897	101588510	.	.	.	ID=RLOC_00009818;geneIDs=comp138915_c0_seq1.path1,comp140565_c0_seq1.path4,comp153364_c1_seq1.path1;transcripts=comp153364_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	101587059	101587942	.	-	.	ID=comp153364_c1_seq1.mrna1;geneID=comp153364_c1_seq1.path1;Name=comp153364_c1_seq1;Dir=indeterminatecoverage=45.6;identity=96.6;matches=229;mismatches=8;indels=0;unknowns=0;Target=comp153364_c1_seq1 52 2 .;locus=RLOC_00009818
Chr1	stalkie_big_nohaplotig	exon	101587059	101587201	96	-	.	Parent=comp153364_c1_seq1.mrna1;Target=comp153364_c1_seq1 237 95 .
Chr1	stalkie_big_nohaplotig	exon	101587849	101587942	96	-	.	Parent=comp153364_c1_seq1.mrna1;Target=comp153364_c1_seq1 94 1 .
Chr1	stalkie_big_nohaplotig	CDS	101587891	101587941	.	-	0	Parent=comp153364_c1_seq1.mrna1
Chr1	gffcl	locus	101588545	101589370	.	-	.	ID=RLOC_00009819;geneIDs=comp151889_c0_seq1.path2;transcripts=comp151889_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	101588545	101589370	.	-	.	ID=comp151889_c0_seq1.mrna2;geneID=comp151889_c0_seq1.path2;Name=comp151889_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=825;mismatches=1;indels=10;unknowns=0;Target=comp151889_c0_seq1 836 1 .;CDS_Target=comp151889_c0_seq1 834 607 .;locus=RLOC_00009819
Chr1	stalkie_big_nohaplotig	exon	101588545	101589370	98	-	.	Parent=comp151889_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	101588547	101588764	.	-	0	Parent=comp151889_c0_seq1.mrna2
Chr1	gffcl	locus	101595945	101596584	.	+	.	ID=RLOC_00009820;geneIDs=comp100363_c0_seq1.path1;transcripts=comp100363_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	101595945	101596584	.	+	.	ID=comp100363_c0_seq1.mrna1;geneID=comp100363_c0_seq1.path1;Name=comp100363_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=640;mismatches=0;indels=0;unknowns=0;Target=comp100363_c0_seq1 640 1 .;CDS_Target=comp100363_c0_seq1 218 42 .;locus=RLOC_00009820
Chr1	stalkie_big_nohaplotig	exon	101595945	101596584	100	+	.	Parent=comp100363_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	101595986	101596162	.	+	0	Parent=comp100363_c0_seq1.mrna1
Chr1	gffcl	locus	101641823	101642332	.	-	.	ID=RLOC_00009821;geneIDs=comp117937_c0_seq1.path1;transcripts=comp117937_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	101641823	101642332	.	-	.	ID=comp117937_c0_seq1.mrna1;geneID=comp117937_c0_seq1.path1;Name=comp117937_c0_seq1;Dir=indeterminatecoverage=95.3;identity=99.8;matches=509;mismatches=1;indels=0;unknowns=0;Target=comp117937_c0_seq1 510 1 .;CDS_Target=comp117937_c0_seq1 72 1 .;locus=RLOC_00009821
Chr1	stalkie_big_nohaplotig	exon	101641823	101642332	99	-	.	Parent=comp117937_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	101642261	101642332	.	-	0	Parent=comp117937_c0_seq1.mrna1
Chr1	gffcl	locus	101665219	101665719	.	-	.	ID=RLOC_00009823;geneIDs=comp163247_c0_seq1.path1;transcripts=comp163247_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	101665219	101665719	.	-	.	ID=comp163247_c0_seq1.mrna1;geneID=comp163247_c0_seq1.path1;Name=comp163247_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=501;mismatches=0;indels=0;unknowns=0;Target=comp163247_c0_seq1 501 1 .;CDS_Target=comp163247_c0_seq1 499 269 .;locus=RLOC_00009823
Chr1	stalkie_big_nohaplotig	exon	101665219	101665719	100	-	.	Parent=comp163247_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	101665221	101665451	.	-	0	Parent=comp163247_c0_seq1.mrna1
Chr1	gffcl	locus	101677069	101678062	.	+	.	ID=RLOC_00009824;geneIDs=Caenorhabditis.path5,comp147589_c0_seq1.path2;transcripts=comp147589_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	101677069	101678062	.	+	.	ID=comp147589_c0_seq1.mrna2;geneID=comp147589_c0_seq1.path2;Name=comp147589_c0_seq1;Dir=indeterminatecoverage=87.7;identity=99.5;matches=989;mismatches=4;indels=1;unknowns=0;Target=comp147589_c0_seq1 993 1 .;CDS_Target=comp147589_c0_seq1 311 192 .;locus=RLOC_00009824
Chr1	stalkie_big_nohaplotig	exon	101677069	101678062	99	+	.	Parent=comp147589_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	101677260	101677380	.	+	0	Parent=comp147589_c0_seq1.mrna2
Chr1	gffcl	locus	101727667	102367629	.	+	.	ID=RLOC_00009826;geneIDs=comp159328_c0_seq1.path1;transcripts=comp159328_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	101727667	102367629	.	+	.	ID=comp159328_c0_seq1.mrna1;geneID=comp159328_c0_seq1.path1;Name=comp159328_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.8;matches=1626;mismatches=19;indels=52;unknowns=0;Target=comp159328_c0_seq1 1810 1586 .;locus=RLOC_00009826
Chr1	stalkie_big_nohaplotig	exon	101727667	101728348	90	+	.	Parent=comp159328_c0_seq1.mrna1;Target=comp159328_c0_seq1 728 1 .
Chr1	stalkie_big_nohaplotig	exon	101861687	101861691	100	+	.	Parent=comp159328_c0_seq1.mrna1;Target=comp159328_c0_seq1 820 816 .
Chr1	stalkie_big_nohaplotig	exon	101863853	101863864	100	+	.	Parent=comp159328_c0_seq1.mrna1;Target=comp159328_c0_seq1 832 821 .
Chr1	stalkie_big_nohaplotig	exon	102366683	102367629	99	+	.	Parent=comp159328_c0_seq1.mrna1;Target=comp159328_c0_seq1 1810 864 .
Chr1	stalkie_big_nohaplotig	CDS	102367405	102367629	.	+	0	Parent=comp159328_c0_seq1.mrna1
Chr1	gffcl	locus	101823029	101825096	.	+	.	ID=RLOC_00009827;geneIDs=comp163868_c0_seq1.path2;transcripts=comp163868_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	101823029	101825096	.	+	.	ID=comp163868_c0_seq1.mrna2;geneID=comp163868_c0_seq1.path2;Name=comp163868_c0_seq1;Dir=indeterminatecoverage=93.4;identity=98.0;matches=1932;mismatches=29;indels=10;unknowns=0;Target=comp163868_c0_seq1 1971 229 .;locus=RLOC_00009827
Chr1	stalkie_big_nohaplotig	exon	101823029	101823050	100	+	.	Parent=comp163868_c0_seq1.mrna2;Target=comp163868_c0_seq1 22 1 .
Chr1	stalkie_big_nohaplotig	exon	101823158	101825096	97	+	.	Parent=comp163868_c0_seq1.mrna2;Target=comp163868_c0_seq1 1971 23 .
Chr1	stalkie_big_nohaplotig	CDS	101823363	101825096	.	+	0	Parent=comp163868_c0_seq1.mrna2
Chr1	gffcl	locus	101862477	101863545	.	+	.	ID=RLOC_00009829;geneIDs=Dp_FBgn0244739.path7;transcripts=Dp_FBgn0244739.mrna7
Chr1	stalkie_big_nohaplotig	mRNA	101862477	101863545	.	+	.	ID=Dp_FBgn0244739.mrna7;geneID=Dp_FBgn0244739.path7;Name=Dp_FBgn0244739;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1057;mismatches=11;indels=1;unknowns=0;Target=Dp_FBgn0244739 1068 1 .;CDS_Target=Dp_FBgn0244739 148 2 .;locus=RLOC_00009829
Chr1	stalkie_big_nohaplotig	exon	101862477	101863545	98	+	.	Parent=Dp_FBgn0244739.mrna7
Chr1	stalkie_big_nohaplotig	CDS	101862478	101862625	.	+	0	Parent=Dp_FBgn0244739.mrna7
Chr1	gffcl	locus	101875734	102015043	.	-	.	ID=RLOC_00009830;geneIDs=FBgn0003965.1.path1;transcripts=FBgn0003965.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	101875734	102015043	.	-	.	ID=FBgn0003965.1.mrna1;geneID=FBgn0003965.1.path1;Name=FBgn0003965.1;Dir=sensecoverage=100.0;identity=87.1;matches=780;mismatches=76;indels=40;unknowns=0;locus=RLOC_00009830
Chr1	stalkie_big_nohaplotig	exon	101875734	101875839	100	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 1065 1170 +
Chr1	stalkie_big_nohaplotig	exon	101875899	101875992	100	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 971 1064 +
Chr1	stalkie_big_nohaplotig	exon	101876134	101876142	100	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 952 960 +
Chr1	stalkie_big_nohaplotig	exon	101878714	101878717	100	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 948 951 +
Chr1	stalkie_big_nohaplotig	exon	101896326	101896327	100	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 946 947 +
Chr1	stalkie_big_nohaplotig	exon	101897618	101897624	100	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 939 945 +
Chr1	stalkie_big_nohaplotig	exon	101897634	101897641	100	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 882 889 +
Chr1	stalkie_big_nohaplotig	exon	101899982	101899984	100	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 879 881 +
Chr1	stalkie_big_nohaplotig	exon	101905929	101905931	100	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 876 878 +
Chr1	stalkie_big_nohaplotig	exon	101911428	101911430	100	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 873 875 +
Chr1	stalkie_big_nohaplotig	exon	101917443	101917522	51	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 743 813 +
Chr1	stalkie_big_nohaplotig	exon	101934889	101934890	100	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 741 742 +
Chr1	stalkie_big_nohaplotig	exon	101942425	101942432	100	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 733 740 +
Chr1	stalkie_big_nohaplotig	exon	101945396	101945441	50	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 667 732 +
Chr1	stalkie_big_nohaplotig	exon	101950071	101950078	100	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 659 666 +
Chr1	stalkie_big_nohaplotig	exon	101957741	101957742	100	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 657 658 +
Chr1	stalkie_big_nohaplotig	exon	101982175	101982181	100	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 650 656 +
Chr1	stalkie_big_nohaplotig	exon	101982183	101982190	100	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 609 616 +
Chr1	stalkie_big_nohaplotig	exon	101989896	101989944	59	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 566 608 +
Chr1	stalkie_big_nohaplotig	exon	101990982	101991024	46	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 526 565 +
Chr1	stalkie_big_nohaplotig	exon	102003647	102003656	100	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 469 478 +
Chr1	stalkie_big_nohaplotig	exon	102007832	102007837	100	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 463 468 +
Chr1	stalkie_big_nohaplotig	exon	102008888	102008892	100	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 458 462 +
Chr1	stalkie_big_nohaplotig	exon	102014550	102014683	100	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 227 360 +
Chr1	stalkie_big_nohaplotig	exon	102014750	102014910	100	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 66 226 +
Chr1	stalkie_big_nohaplotig	exon	102014979	102015043	100	-	.	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 1 65 +
Chr1	stalkie_big_nohaplotig	CDS	101875734	101875839	.	-	1	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 1065 1170 +
Chr1	stalkie_big_nohaplotig	CDS	101875899	101875992	.	-	2	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 971 1064 +
Chr1	stalkie_big_nohaplotig	CDS	101876134	101876142	.	-	2	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 952 960 +
Chr1	stalkie_big_nohaplotig	CDS	101878714	101878717	.	-	0	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 948 951 +
Chr1	stalkie_big_nohaplotig	CDS	101896326	101896327	.	-	2	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 946 947 +
Chr1	stalkie_big_nohaplotig	CDS	101897618	101897624	.	-	0	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 939 945 +
Chr1	stalkie_big_nohaplotig	CDS	101897634	101897641	.	-	2	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 882 889 +
Chr1	stalkie_big_nohaplotig	CDS	101899982	101899984	.	-	2	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 879 881 +
Chr1	stalkie_big_nohaplotig	CDS	101905929	101905931	.	-	2	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 876 878 +
Chr1	stalkie_big_nohaplotig	CDS	101911428	101911430	.	-	2	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 873 875 +
Chr1	stalkie_big_nohaplotig	CDS	101917443	101917522	.	-	1	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 743 813 +
Chr1	stalkie_big_nohaplotig	CDS	101934889	101934890	.	-	0	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 741 742 +
Chr1	stalkie_big_nohaplotig	CDS	101942425	101942432	.	-	2	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 733 740 +
Chr1	stalkie_big_nohaplotig	CDS	101945396	101945441	.	-	0	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 667 732 +
Chr1	stalkie_big_nohaplotig	CDS	101950071	101950078	.	-	2	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 659 666 +
Chr1	stalkie_big_nohaplotig	CDS	101957741	101957742	.	-	1	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 657 658 +
Chr1	stalkie_big_nohaplotig	CDS	101982175	101982181	.	-	2	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 650 656 +
Chr1	stalkie_big_nohaplotig	CDS	101982183	101982190	.	-	1	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 609 616 +
Chr1	stalkie_big_nohaplotig	CDS	101989896	101989944	.	-	2	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 566 608 +
Chr1	stalkie_big_nohaplotig	CDS	101990982	101991024	.	-	0	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 526 565 +
Chr1	stalkie_big_nohaplotig	CDS	102003647	102003656	.	-	1	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 469 478 +
Chr1	stalkie_big_nohaplotig	CDS	102007832	102007837	.	-	1	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 463 468 +
Chr1	stalkie_big_nohaplotig	CDS	102008888	102008892	.	-	0	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 458 462 +
Chr1	stalkie_big_nohaplotig	CDS	102014550	102014683	.	-	2	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 227 360 +
Chr1	stalkie_big_nohaplotig	CDS	102014750	102014910	.	-	1	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 66 226 +
Chr1	stalkie_big_nohaplotig	CDS	102014979	102015043	.	-	0	Parent=FBgn0003965.1.mrna1;Target=FBgn0003965.1 1 65 +
Chr1	gffcl	locus	101914732	101915281	.	+	.	ID=RLOC_00009831;geneIDs=CPIJ017423.path1;transcripts=CPIJ017423.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	101914732	101915281	.	+	.	ID=CPIJ017423.mrna1;geneID=CPIJ017423.path1;Name=CPIJ017423;Dir=indeterminatecoverage=92.1;identity=100.0;matches=550;mismatches=0;indels=0;unknowns=0;Target=CPIJ017423 597 48 .;CDS_Target=CPIJ017423 597 49 .;locus=RLOC_00009831
Chr1	stalkie_big_nohaplotig	exon	101914732	101915281	100	+	.	Parent=CPIJ017423.mrna1
Chr1	stalkie_big_nohaplotig	CDS	101914733	101915281	.	+	0	Parent=CPIJ017423.mrna1
Chr1	gffcl	locus	102001624	102002470	.	+	.	ID=RLOC_00009833;geneIDs=Dp_FBgn0243606.path1,comp163367_c4_seq1.path1;transcripts=comp163367_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	102001624	102002470	.	+	.	ID=comp163367_c4_seq1.mrna1;geneID=comp163367_c4_seq1.path1;Name=comp163367_c4_seq1;Dir=indeterminatecoverage=99.9;identity=98.3;matches=833;mismatches=14;indels=0;unknowns=0;Target=comp163367_c4_seq1 847 1 .;CDS_Target=comp163367_c4_seq1 847 281 .;locus=RLOC_00009833
Chr1	stalkie_big_nohaplotig	exon	102001624	102002470	98	+	.	Parent=comp163367_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	102001904	102002470	.	+	0	Parent=comp163367_c4_seq1.mrna1
Chr1	gffcl	locus	102106078	102107240	.	-	.	ID=RLOC_00009835;geneIDs=FBgn0262534.2.path3;transcripts=FBgn0262534.2.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	102106078	102107240	.	-	.	ID=FBgn0262534.2.mrna3;geneID=FBgn0262534.2.path3;Name=FBgn0262534.2;Dir=sensecoverage=100.0;identity=99.2;matches=1053;mismatches=9;indels=0;unknowns=0;locus=RLOC_00009835
Chr1	stalkie_big_nohaplotig	exon	102106078	102106578	99	-	.	Parent=FBgn0262534.2.mrna3;Target=FBgn0262534.2 562 1062 +
Chr1	stalkie_big_nohaplotig	exon	102106626	102107052	99	-	.	Parent=FBgn0262534.2.mrna3;Target=FBgn0262534.2 135 561 +
Chr1	stalkie_big_nohaplotig	exon	102107107	102107240	99	-	.	Parent=FBgn0262534.2.mrna3;Target=FBgn0262534.2 1 134 +
Chr1	stalkie_big_nohaplotig	CDS	102106078	102106578	.	-	0	Parent=FBgn0262534.2.mrna3;Target=FBgn0262534.2 562 1062 +
Chr1	stalkie_big_nohaplotig	CDS	102106626	102107052	.	-	1	Parent=FBgn0262534.2.mrna3;Target=FBgn0262534.2 135 561 +
Chr1	stalkie_big_nohaplotig	CDS	102107107	102107240	.	-	0	Parent=FBgn0262534.2.mrna3;Target=FBgn0262534.2 1 134 +
Chr1	gffcl	locus	102110096	102110824	.	+	.	ID=RLOC_00009836;geneIDs=comp155983_c0_seq1.path6;transcripts=comp155983_c0_seq1.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	102110096	102110824	.	+	.	ID=comp155983_c0_seq1.mrna6;geneID=comp155983_c0_seq1.path6;Name=comp155983_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=722;mismatches=7;indels=2;unknowns=0;Target=comp155983_c0_seq1 731 1 .;CDS_Target=comp155983_c0_seq1 105 1 .;locus=RLOC_00009836
Chr1	stalkie_big_nohaplotig	exon	102110096	102110824	98	+	.	Parent=comp155983_c0_seq1.mrna6
Chr1	stalkie_big_nohaplotig	CDS	102110096	102110200	.	+	0	Parent=comp155983_c0_seq1.mrna6
Chr1	gffcl	locus	102161721	102165349	.	+	.	ID=RLOC_00009838;geneIDs=comp163893_c0_seq1.path2;transcripts=comp163893_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	102161721	102165349	.	+	.	ID=comp163893_c0_seq1.mrna2;geneID=comp163893_c0_seq1.path2;Name=comp163893_c0_seq1;Dir=indeterminatecoverage=92.9;identity=98.6;matches=3579;mismatches=50;indels=2;unknowns=0;Target=comp163893_c0_seq1 3909 279 .;CDS_Target=comp163893_c0_seq1 592 452 .;locus=RLOC_00009838
Chr1	stalkie_big_nohaplotig	exon	102161721	102165349	98	+	.	Parent=comp163893_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	102161894	102162033	.	+	0	Parent=comp163893_c0_seq1.mrna2
Chr1	gffcl	locus	102169079	102169590	.	-	.	ID=RLOC_00009840;geneIDs=comp54987_c0_seq1.path1;transcripts=comp54987_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	102169079	102169590	.	-	.	ID=comp54987_c0_seq1.mrna1;geneID=comp54987_c0_seq1.path1;Name=comp54987_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=507;mismatches=3;indels=2;unknowns=0;Target=comp54987_c0_seq1 510 1 .;CDS_Target=comp54987_c0_seq1 370 230 .;locus=RLOC_00009840
Chr1	stalkie_big_nohaplotig	exon	102169079	102169590	99	-	.	Parent=comp54987_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	102169219	102169359	.	-	0	Parent=comp54987_c0_seq1.mrna1
Chr1	gffcl	locus	102208327	102209237	.	-	.	ID=RLOC_00009841;geneIDs=comp163102_c1_seq1.path1;transcripts=comp163102_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	102208327	102209237	.	-	.	ID=comp163102_c1_seq1.mrna1;geneID=comp163102_c1_seq1.path1;Name=comp163102_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=907;mismatches=3;indels=1;unknowns=0;Target=comp163102_c1_seq1 910 1 .;CDS_Target=comp163102_c1_seq1 586 401 .;locus=RLOC_00009841
Chr1	stalkie_big_nohaplotig	exon	102208327	102209237	99	-	.	Parent=comp163102_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	102208652	102208837	.	-	0	Parent=comp163102_c1_seq1.mrna1
Chr1	gffcl	locus	102331945	102332655	.	+	.	ID=RLOC_00009843;geneIDs=Dp_FBgn0250603.path1;transcripts=Dp_FBgn0250603.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	102331945	102332655	.	+	.	ID=Dp_FBgn0250603.mrna1;geneID=Dp_FBgn0250603.path1;Name=Dp_FBgn0250603;Dir=indeterminatecoverage=100.0;identity=98.9;matches=703;mismatches=8;indels=0;unknowns=0;Target=Dp_FBgn0250603 711 1 .;locus=RLOC_00009843
Chr1	stalkie_big_nohaplotig	exon	102331945	102332655	98	+	.	Parent=Dp_FBgn0250603.mrna1
Chr1	stalkie_big_nohaplotig	CDS	102331945	102332655	.	+	0	Parent=Dp_FBgn0250603.mrna1
Chr1	gffcl	locus	102374899	102375607	.	+	.	ID=RLOC_00009845;geneIDs=comp135279_c0_seq1.path1;transcripts=comp135279_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	102374899	102375607	.	+	.	ID=comp135279_c0_seq1.mrna1;geneID=comp135279_c0_seq1.path1;Name=comp135279_c0_seq1;Dir=indeterminatecoverage=98.7;identity=100.0;matches=709;mismatches=0;indels=0;unknowns=0;Target=comp135279_c0_seq1 718 10 .;CDS_Target=comp135279_c0_seq1 92 12 .;locus=RLOC_00009845
Chr1	stalkie_big_nohaplotig	exon	102374899	102375607	100	+	.	Parent=comp135279_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	102374901	102374981	.	+	0	Parent=comp135279_c0_seq1.mrna1
Chr1	gffcl	locus	102384910	102387233	.	-	.	ID=RLOC_00009846;geneIDs=comp162492_c0_seq1.path1;transcripts=comp162492_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	102384910	102387233	.	-	.	ID=comp162492_c0_seq1.mrna1;geneID=comp162492_c0_seq1.path1;Name=comp162492_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.1;matches=2245;mismatches=70;indels=46;unknowns=0;Target=comp162492_c0_seq1 2352 1 .;CDS_Target=comp162492_c0_seq1 969 715 .;locus=RLOC_00009846
Chr1	stalkie_big_nohaplotig	exon	102384910	102387233	95	-	.	Parent=comp162492_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	102386265	102386519	.	-	0	Parent=comp162492_c0_seq1.mrna1
Chr1	gffcl	locus	102387561	102388527	.	-	.	ID=RLOC_00009847;geneIDs=comp161778_c2_seq1.path1;transcripts=comp161778_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	102387561	102388527	.	-	.	ID=comp161778_c2_seq1.mrna1;geneID=comp161778_c2_seq1.path1;Name=comp161778_c2_seq1;Dir=indeterminatecoverage=98.2;identity=99.7;matches=964;mismatches=3;indels=0;unknowns=0;Target=comp161778_c2_seq1 985 19 .;CDS_Target=comp161778_c2_seq1 985 863 .;locus=RLOC_00009847
Chr1	stalkie_big_nohaplotig	exon	102387561	102388527	99	-	.	Parent=comp161778_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	102387561	102387683	.	-	0	Parent=comp161778_c2_seq1.mrna1
Chr1	gffcl	locus	102757608	102761457	.	-	.	ID=RLOC_00009849;geneIDs=comp163959_c0_seq1.path1;transcripts=comp163959_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	102757608	102761457	.	-	.	ID=comp163959_c0_seq1.mrna1;geneID=comp163959_c0_seq1.path1;Name=comp163959_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=3768;mismatches=58;indels=24;unknowns=0;Target=comp163959_c0_seq1 3826 1 .;CDS_Target=comp163959_c0_seq1 2116 428 .;locus=RLOC_00009849
Chr1	stalkie_big_nohaplotig	exon	102757608	102761457	97	-	.	Parent=comp163959_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	102759318	102761006	.	-	0	Parent=comp163959_c0_seq1.mrna1
Chr1	gffcl	locus	102814196	102814445	.	+	.	ID=RLOC_00009852;geneIDs=comp140565_c0_seq1.path5;transcripts=comp140565_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	102814196	102814445	.	+	.	ID=comp140565_c0_seq1.mrna5;geneID=comp140565_c0_seq1.path5;Name=comp140565_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=246;mismatches=4;indels=0;unknowns=0;Target=comp140565_c0_seq1 250 1 .;CDS_Target=comp140565_c0_seq1 249 1 .;locus=RLOC_00009852
Chr1	stalkie_big_nohaplotig	exon	102814196	102814445	98	+	.	Parent=comp140565_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	102814196	102814444	.	+	0	Parent=comp140565_c0_seq1.mrna5
Chr1	gffcl	locus	102824853	102824894	.	+	.	ID=RLOC_00009853;geneIDs=comp157935_c0_seq1.path2;transcripts=comp157935_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	102824853	102824894	.	+	.	ID=comp157935_c0_seq1.mrna2;geneID=comp157935_c0_seq1.path2;Name=comp157935_c0_seq1;Dir=indeterminatecoverage=4.2;identity=100.0;matches=42;mismatches=0;indels=0;unknowns=0;Target=comp157935_c0_seq1 991 950 .;locus=RLOC_00009853
Chr1	stalkie_big_nohaplotig	exon	102824853	102824894	100	+	.	Parent=comp157935_c0_seq1.mrna2
Chr1	gffcl	locus	102852793	102867984	.	-	.	ID=RLOC_00009855;geneIDs=comp161930_c0_seq1.path1;transcripts=comp161930_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	102852793	102867984	.	-	.	ID=comp161930_c0_seq1.mrna1;geneID=comp161930_c0_seq1.path1;Name=comp161930_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.1;matches=2263;mismatches=111;indels=6;unknowns=0;Target=comp161930_c0_seq1 2200 1202 .;locus=RLOC_00009855
Chr1	stalkie_big_nohaplotig	exon	102852793	102854414	93	-	.	Parent=comp161930_c0_seq1.mrna1;Target=comp161930_c0_seq1 2378 757 .
Chr1	stalkie_big_nohaplotig	exon	102867231	102867984	98	-	.	Parent=comp161930_c0_seq1.mrna1;Target=comp161930_c0_seq1 756 1 .
Chr1	stalkie_big_nohaplotig	CDS	102852970	102853967	.	-	0	Parent=comp161930_c0_seq1.mrna1
Chr1	gffcl	locus	102878762	102881668	.	-	.	ID=RLOC_00009856;geneIDs=comp157460_c5_seq1.path1;transcripts=comp157460_c5_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	102878762	102881668	.	-	.	ID=comp157460_c5_seq1.mrna1;geneID=comp157460_c5_seq1.path1;Name=comp157460_c5_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=2883;mismatches=24;indels=0;unknowns=0;Target=comp157460_c5_seq1 2907 1 .;CDS_Target=comp157460_c5_seq1 2907 1375 .;locus=RLOC_00009856
Chr1	stalkie_big_nohaplotig	exon	102878762	102881668	99	-	.	Parent=comp157460_c5_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	102878762	102880294	.	-	0	Parent=comp157460_c5_seq1.mrna1
Chr1	gffcl	locus	102940867	102942444	.	-	.	ID=RLOC_00009857;geneIDs=comp151077_c1_seq1.path1;transcripts=comp151077_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	102940867	102942444	.	-	.	ID=comp151077_c1_seq1.mrna1;geneID=comp151077_c1_seq1.path1;Name=comp151077_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1561;mismatches=11;indels=9;unknowns=0;Target=comp151077_c1_seq1 1575 1 .;CDS_Target=comp151077_c1_seq1 268 2 .;locus=RLOC_00009857
Chr1	stalkie_big_nohaplotig	exon	102940867	102942444	98	-	.	Parent=comp151077_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	102942177	102942443	.	-	0	Parent=comp151077_c1_seq1.mrna1
Chr1	gffcl	locus	102962019	102962701	.	+	.	ID=RLOC_00009858;geneIDs=comp2076789_c0_seq1.path1;transcripts=comp2076789_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	102962019	102962701	.	+	.	ID=comp2076789_c0_seq1.mrna1;geneID=comp2076789_c0_seq1.path1;Name=comp2076789_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.3;matches=681;mismatches=2;indels=10;unknowns=0;Target=comp2076789_c0_seq1 693 1 .;CDS_Target=comp2076789_c0_seq1 692 27 .;locus=RLOC_00009858
Chr1	stalkie_big_nohaplotig	exon	102962019	102962701	98	+	.	Parent=comp2076789_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	102962045	102962700	.	+	0	Parent=comp2076789_c0_seq1.mrna1
Chr1	gffcl	locus	102998242	102998851	.	-	.	ID=RLOC_00009860;geneIDs=comp161649_c2_seq1.path1;transcripts=comp161649_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	102998242	102998851	.	-	.	ID=comp161649_c2_seq1.mrna1;geneID=comp161649_c2_seq1.path1;Name=comp161649_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=606;mismatches=4;indels=0;unknowns=0;Target=comp161649_c2_seq1 610 1 .;CDS_Target=comp161649_c2_seq1 340 2 .;locus=RLOC_00009860
Chr1	stalkie_big_nohaplotig	exon	102998242	102998851	99	-	.	Parent=comp161649_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	102998512	102998850	.	-	0	Parent=comp161649_c2_seq1.mrna1
Chr1	gffcl	locus	103010213	103010245	.	-	.	ID=RLOC_00009861;geneIDs=FBgn0052037.1.path1;transcripts=FBgn0052037.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	103010213	103010245	.	-	.	ID=FBgn0052037.1.mrna1;geneID=FBgn0052037.1.path1;Name=FBgn0052037.1;Dir=indeterminatecoverage=4.6;identity=100.0;matches=33;mismatches=0;indels=0;unknowns=0;Target=FBgn0052037.1 33 1 .;locus=RLOC_00009861
Chr1	stalkie_big_nohaplotig	exon	103010213	103010245	100	-	.	Parent=FBgn0052037.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	103010213	103010245	.	-	0	Parent=FBgn0052037.1.mrna1
Chr1	gffcl	locus	103011535	103011840	.	-	.	ID=RLOC_00009862;geneIDs=comp157821_c1_seq1.path1;transcripts=comp157821_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	103011535	103011840	.	-	.	ID=comp157821_c1_seq1.mrna1;geneID=comp157821_c1_seq1.path1;Name=comp157821_c1_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=306;mismatches=0;indels=0;unknowns=0;Target=comp157821_c1_seq1 306 1 .;CDS_Target=comp157821_c1_seq1 187 65 .;locus=RLOC_00009862
Chr1	stalkie_big_nohaplotig	exon	103011535	103011840	100	-	.	Parent=comp157821_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	103011654	103011776	.	-	0	Parent=comp157821_c1_seq1.mrna1
Chr1	gffcl	locus	103046249	103046504	.	-	.	ID=RLOC_00009863;geneIDs=FBgn0250788.1.path1;transcripts=FBgn0250788.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	103046249	103046504	.	-	.	ID=FBgn0250788.1.mrna1;geneID=FBgn0250788.1.path1;Name=FBgn0250788.1;Dir=indeterminatecoverage=3.7;identity=100.0;matches=256;mismatches=0;indels=0;unknowns=0;Target=FBgn0250788.1 256 1 .;locus=RLOC_00009863
Chr1	stalkie_big_nohaplotig	exon	103046249	103046504	100	-	.	Parent=FBgn0250788.1.mrna1
Chr1	gffcl	locus	103054656	103055281	.	-	.	ID=RLOC_00009864;geneIDs=comp44647_c0_seq1.path1;transcripts=comp44647_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	103054656	103055281	.	-	.	ID=comp44647_c0_seq1.mrna1;geneID=comp44647_c0_seq1.path1;Name=comp44647_c0_seq1;Dir=indeterminatecoverage=97.5;identity=99.2;matches=623;mismatches=3;indels=2;unknowns=0;Target=comp44647_c0_seq1 644 17 .;CDS_Target=comp44647_c0_seq1 174 19 .;locus=RLOC_00009864
Chr1	stalkie_big_nohaplotig	exon	103054656	103055281	99	-	.	Parent=comp44647_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	103055124	103055279	.	-	0	Parent=comp44647_c0_seq1.mrna1
Chr1	gffcl	locus	103073530	103077013	.	+	.	ID=RLOC_00009865;geneIDs=FBgn0030858.1.path1;transcripts=FBgn0030858.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	103073530	103077013	.	+	.	ID=FBgn0030858.1.mrna1;geneID=FBgn0030858.1.path1;Name=FBgn0030858.1;Dir=sensecoverage=100.0;identity=100.0;matches=3299;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009865
Chr1	stalkie_big_nohaplotig	exon	103073530	103074342	100	+	.	Parent=FBgn0030858.1.mrna1;Target=FBgn0030858.1 1 813 +
Chr1	stalkie_big_nohaplotig	exon	103074402	103074646	100	+	.	Parent=FBgn0030858.1.mrna1;Target=FBgn0030858.1 814 1058 +
Chr1	stalkie_big_nohaplotig	exon	103074704	103076095	100	+	.	Parent=FBgn0030858.1.mrna1;Target=FBgn0030858.1 1059 2450 +
Chr1	stalkie_big_nohaplotig	exon	103076164	103077013	99	+	.	Parent=FBgn0030858.1.mrna1;Target=FBgn0030858.1 2451 3300 +
Chr1	stalkie_big_nohaplotig	CDS	103073530	103074342	.	+	0	Parent=FBgn0030858.1.mrna1;Target=FBgn0030858.1 1 813 +
Chr1	stalkie_big_nohaplotig	CDS	103074402	103074646	.	+	0	Parent=FBgn0030858.1.mrna1;Target=FBgn0030858.1 814 1058 +
Chr1	stalkie_big_nohaplotig	CDS	103074704	103076095	.	+	1	Parent=FBgn0030858.1.mrna1;Target=FBgn0030858.1 1059 2450 +
Chr1	stalkie_big_nohaplotig	CDS	103076164	103077013	.	+	1	Parent=FBgn0030858.1.mrna1;Target=FBgn0030858.1 2451 3300 +
Chr1	gffcl	locus	103079140	103988193	.	-	.	ID=RLOC_00009866;geneIDs=Hydra.path5,comp163963_c0_seq1.path1;transcripts=comp163963_c0_seq1.mrna1,Hydra.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	103079140	103988193	.	-	.	ID=comp163963_c0_seq1.mrna1;geneID=comp163963_c0_seq1.path1;Name=comp163963_c0_seq1;Dir=sensecoverage=99.9;identity=87.1;matches=2128;mismatches=161;indels=154;unknowns=0;Target=comp163963_c0_seq1 320 541 +;locus=RLOC_00009866
Chr1	stalkie_big_nohaplotig	exon	103079140	103079782	98	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 4861 5504 +
Chr1	stalkie_big_nohaplotig	exon	103087373	103087414	51	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 4797 4860 +
Chr1	stalkie_big_nohaplotig	exon	103088953	103088996	55	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 4699 4760 +
Chr1	stalkie_big_nohaplotig	exon	103089018	103089026	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 4648 4656 +
Chr1	stalkie_big_nohaplotig	exon	103091102	103091117	55	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 4619 4647 +
Chr1	stalkie_big_nohaplotig	exon	103108839	103108850	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 4080 4091 +
Chr1	stalkie_big_nohaplotig	exon	103111533	103111567	56	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 4045 4079 +
Chr1	stalkie_big_nohaplotig	exon	103119500	103119507	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 4037 4044 +
Chr1	stalkie_big_nohaplotig	exon	103123538	103123544	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 4030 4036 +
Chr1	stalkie_big_nohaplotig	exon	103125391	103125394	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 4026 4029 +
Chr1	stalkie_big_nohaplotig	exon	103125398	103125403	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 3974 3979 +
Chr1	stalkie_big_nohaplotig	exon	103131298	103131301	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 3970 3973 +
Chr1	stalkie_big_nohaplotig	exon	103135798	103135802	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 3965 3969 +
Chr1	stalkie_big_nohaplotig	exon	103138828	103138834	85	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 3958 3964 +
Chr1	stalkie_big_nohaplotig	exon	103166537	103166564	46	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 3641 3696 +
Chr1	stalkie_big_nohaplotig	exon	103168101	103168103	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 3638 3640 +
Chr1	stalkie_big_nohaplotig	exon	103172108	103172116	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 3629 3637 +
Chr1	stalkie_big_nohaplotig	exon	103173310	103173316	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 3622 3628 +
Chr1	stalkie_big_nohaplotig	exon	103197697	103197700	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 3618 3621 +
Chr1	stalkie_big_nohaplotig	exon	103203107	103203109	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 3615 3617 +
Chr1	stalkie_big_nohaplotig	exon	103209354	103209360	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 3608 3614 +
Chr1	stalkie_big_nohaplotig	exon	103210453	103210455	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 3605 3607 +
Chr1	stalkie_big_nohaplotig	exon	103222086	103222087	50	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 3603 3604 +
Chr1	stalkie_big_nohaplotig	exon	103228474	103228486	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 3590 3602 +
Chr1	stalkie_big_nohaplotig	exon	103273685	103273727	47	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 3240 3277 +
Chr1	stalkie_big_nohaplotig	exon	103513798	103513808	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 3156 3166 +
Chr1	stalkie_big_nohaplotig	exon	103516369	103516371	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 3153 3155 +
Chr1	stalkie_big_nohaplotig	exon	103520749	103520763	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 2900 2914 +
Chr1	stalkie_big_nohaplotig	exon	103535488	103535491	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 2896 2899 +
Chr1	stalkie_big_nohaplotig	exon	103541149	103541156	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 2885 2892 +
Chr1	stalkie_big_nohaplotig	exon	103541348	103541399	46	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 2383 2445 +
Chr1	stalkie_big_nohaplotig	exon	103541567	103541618	43	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 2084 2129 +
Chr1	stalkie_big_nohaplotig	exon	103551482	103551510	76	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 2050 2079 +
Chr1	stalkie_big_nohaplotig	exon	103552150	103552205	50	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 1995 2049 +
Chr1	stalkie_big_nohaplotig	exon	103553786	103553796	81	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 1917 1926 +
Chr1	stalkie_big_nohaplotig	exon	103564893	103564900	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 1909 1916 +
Chr1	stalkie_big_nohaplotig	exon	103580933	103581002	69	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 1837 1908 +
Chr1	stalkie_big_nohaplotig	exon	103584029	103584032	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 1833 1836 +
Chr1	stalkie_big_nohaplotig	exon	103593287	103593296	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 1524 1533 +
Chr1	stalkie_big_nohaplotig	exon	103598223	103598264	54	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 1485 1523 +
Chr1	stalkie_big_nohaplotig	exon	103602022	103602030	77	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 1476 1484 +
Chr1	stalkie_big_nohaplotig	exon	103602900	103602902	100	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 1473 1475 +
Chr1	stalkie_big_nohaplotig	exon	103608051	103608058	42	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 1459 1472 +
Chr1	stalkie_big_nohaplotig	exon	103987235	103988193	99	-	.	Parent=comp163963_c0_seq1.mrna1;Target=comp163963_c0_seq1 5 963 +
Chr1	stalkie_big_nohaplotig	CDS	103987657	103987878	.	-	0	Parent=comp163963_c0_seq1.mrna1
Chr1	gffcl	locus	103091065	103094660	.	+	.	ID=RLOC_00009868;geneIDs=comp151123_c0_seq1.path1;transcripts=comp151123_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	103091065	103094660	.	+	.	ID=comp151123_c0_seq1.mrna1;geneID=comp151123_c0_seq1.path1;Name=comp151123_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=621;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009868
Chr1	stalkie_big_nohaplotig	exon	103091065	103091426	99	+	.	Parent=comp151123_c0_seq1.mrna1;Target=comp151123_c0_seq1 261 622 -
Chr1	stalkie_big_nohaplotig	exon	103094401	103094660	100	+	.	Parent=comp151123_c0_seq1.mrna1;Target=comp151123_c0_seq1 1 260 -
Chr1	stalkie_big_nohaplotig	CDS	103091421	103091426	.	+	0	Parent=comp151123_c0_seq1.mrna1;Target=comp151123_c0_seq1 261 266 .
Chr1	stalkie_big_nohaplotig	CDS	103094401	103094505	.	+	0	Parent=comp151123_c0_seq1.mrna1;Target=comp151123_c0_seq1 156 260 .
Chr1	gffcl	locus	103092626	103092996	.	+	.	ID=RLOC_00009869;geneIDs=comp145191_c0_seq1.path1;transcripts=comp145191_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	103092626	103092996	.	+	.	ID=comp145191_c0_seq1.mrna1;geneID=comp145191_c0_seq1.path1;Name=comp145191_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=370;mismatches=1;indels=0;unknowns=0;Target=comp145191_c0_seq1 371 1 .;CDS_Target=comp145191_c0_seq1 272 183 .;locus=RLOC_00009869
Chr1	stalkie_big_nohaplotig	exon	103092626	103092996	99	+	.	Parent=comp145191_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	103092808	103092897	.	+	0	Parent=comp145191_c0_seq1.mrna1
Chr1	gffcl	locus	103093117	103097283	.	-	.	ID=RLOC_00009870;geneIDs=FBgn0024992.1.path1;transcripts=FBgn0024992.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	103093117	103097283	.	-	.	ID=FBgn0024992.1.mrna1;geneID=FBgn0024992.1.path1;Name=FBgn0024992.1;Dir=sensecoverage=100.0;identity=100.0;matches=2262;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009870
Chr1	stalkie_big_nohaplotig	exon	103093117	103093263	100	-	.	Parent=FBgn0024992.1.mrna1;Target=FBgn0024992.1 2116 2262 +
Chr1	stalkie_big_nohaplotig	exon	103093321	103093512	100	-	.	Parent=FBgn0024992.1.mrna1;Target=FBgn0024992.1 1924 2115 +
Chr1	stalkie_big_nohaplotig	exon	103093566	103093888	100	-	.	Parent=FBgn0024992.1.mrna1;Target=FBgn0024992.1 1601 1923 +
Chr1	stalkie_big_nohaplotig	exon	103093951	103094221	100	-	.	Parent=FBgn0024992.1.mrna1;Target=FBgn0024992.1 1330 1600 +
Chr1	stalkie_big_nohaplotig	exon	103095677	103096213	100	-	.	Parent=FBgn0024992.1.mrna1;Target=FBgn0024992.1 793 1329 +
Chr1	stalkie_big_nohaplotig	exon	103096272	103096405	100	-	.	Parent=FBgn0024992.1.mrna1;Target=FBgn0024992.1 659 792 +
Chr1	stalkie_big_nohaplotig	exon	103096529	103096763	100	-	.	Parent=FBgn0024992.1.mrna1;Target=FBgn0024992.1 424 658 +
Chr1	stalkie_big_nohaplotig	exon	103096812	103097108	100	-	.	Parent=FBgn0024992.1.mrna1;Target=FBgn0024992.1 127 423 +
Chr1	stalkie_big_nohaplotig	exon	103097158	103097283	100	-	.	Parent=FBgn0024992.1.mrna1;Target=FBgn0024992.1 1 126 +
Chr1	stalkie_big_nohaplotig	CDS	103093117	103093263	.	-	0	Parent=FBgn0024992.1.mrna1;Target=FBgn0024992.1 2116 2262 +
Chr1	stalkie_big_nohaplotig	CDS	103093321	103093512	.	-	0	Parent=FBgn0024992.1.mrna1;Target=FBgn0024992.1 1924 2115 +
Chr1	stalkie_big_nohaplotig	CDS	103093566	103093888	.	-	2	Parent=FBgn0024992.1.mrna1;Target=FBgn0024992.1 1601 1923 +
Chr1	stalkie_big_nohaplotig	CDS	103093951	103094221	.	-	0	Parent=FBgn0024992.1.mrna1;Target=FBgn0024992.1 1330 1600 +
Chr1	stalkie_big_nohaplotig	CDS	103095677	103096213	.	-	0	Parent=FBgn0024992.1.mrna1;Target=FBgn0024992.1 793 1329 +
Chr1	stalkie_big_nohaplotig	CDS	103096272	103096405	.	-	2	Parent=FBgn0024992.1.mrna1;Target=FBgn0024992.1 659 792 +
Chr1	stalkie_big_nohaplotig	CDS	103096529	103096763	.	-	0	Parent=FBgn0024992.1.mrna1;Target=FBgn0024992.1 424 658 +
Chr1	stalkie_big_nohaplotig	CDS	103096812	103097108	.	-	0	Parent=FBgn0024992.1.mrna1;Target=FBgn0024992.1 127 423 +
Chr1	stalkie_big_nohaplotig	CDS	103097158	103097283	.	-	0	Parent=FBgn0024992.1.mrna1;Target=FBgn0024992.1 1 126 +
Chr1	gffcl	locus	103116813	103118768	.	+	.	ID=RLOC_00009871;geneIDs=FBgn0010391.1.path1;transcripts=FBgn0010391.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	103116813	103118768	.	+	.	ID=FBgn0010391.1.mrna1;geneID=FBgn0010391.1.path1;Name=FBgn0010391.1;Dir=sensecoverage=100.0;identity=99.9;matches=1838;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009871
Chr1	stalkie_big_nohaplotig	exon	103116813	103116941	100	+	.	Parent=FBgn0010391.1.mrna1;Target=FBgn0010391.1 1 129 +
Chr1	stalkie_big_nohaplotig	exon	103117002	103117640	99	+	.	Parent=FBgn0010391.1.mrna1;Target=FBgn0010391.1 130 768 +
Chr1	stalkie_big_nohaplotig	exon	103117698	103118768	100	+	.	Parent=FBgn0010391.1.mrna1;Target=FBgn0010391.1 769 1839 +
Chr1	stalkie_big_nohaplotig	CDS	103116813	103116941	.	+	0	Parent=FBgn0010391.1.mrna1;Target=FBgn0010391.1 1 129 +
Chr1	stalkie_big_nohaplotig	CDS	103117002	103117640	.	+	0	Parent=FBgn0010391.1.mrna1;Target=FBgn0010391.1 130 768 +
Chr1	stalkie_big_nohaplotig	CDS	103117698	103118768	.	+	0	Parent=FBgn0010391.1.mrna1;Target=FBgn0010391.1 769 1839 +
Chr1	gffcl	locus	103147935	103148337	.	-	.	ID=RLOC_00009872;geneIDs=comp153615_c1_seq1.path8;transcripts=comp153615_c1_seq1.mrna8
Chr1	stalkie_big_nohaplotig	mRNA	103147935	103148337	.	-	.	ID=comp153615_c1_seq1.mrna8;geneID=comp153615_c1_seq1.path8;Name=comp153615_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=402;mismatches=1;indels=0;unknowns=0;Target=comp153615_c1_seq1 403 1 .;CDS_Target=comp153615_c1_seq1 96 1 .;locus=RLOC_00009872
Chr1	stalkie_big_nohaplotig	exon	103147935	103148337	99	-	.	Parent=comp153615_c1_seq1.mrna8
Chr1	stalkie_big_nohaplotig	CDS	103148242	103148337	.	-	0	Parent=comp153615_c1_seq1.mrna8
Chr1	gffcl	locus	103339043	103565213	.	+	.	ID=RLOC_00009876;geneIDs=comp160064_c0_seq1.path2;transcripts=comp160064_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	103339043	103565213	.	+	.	ID=comp160064_c0_seq1.mrna2;geneID=comp160064_c0_seq1.path2;Name=comp160064_c0_seq1;Dir=indeterminatecoverage=93.5;identity=95.8;matches=632;mismatches=18;indels=10;unknowns=0;Target=comp160064_c0_seq1 608 510 .;locus=RLOC_00009876
Chr1	stalkie_big_nohaplotig	exon	103339043	103339048	100	+	.	Parent=comp160064_c0_seq1.mrna2;Target=comp160064_c0_seq1 52 47 .
Chr1	stalkie_big_nohaplotig	exon	103339843	103339844	100	+	.	Parent=comp160064_c0_seq1.mrna2;Target=comp160064_c0_seq1 54 53 .
Chr1	stalkie_big_nohaplotig	exon	103355331	103355338	100	+	.	Parent=comp160064_c0_seq1.mrna2;Target=comp160064_c0_seq1 62 55 .
Chr1	stalkie_big_nohaplotig	exon	103564580	103565213	95	+	.	Parent=comp160064_c0_seq1.mrna2;Target=comp160064_c0_seq1 706 63 .
Chr1	stalkie_big_nohaplotig	CDS	103565027	103565115	.	+	0	Parent=comp160064_c0_seq1.mrna2
Chr1	gffcl	locus	103471622	103471767	.	+	.	ID=RLOC_00009878;geneIDs=comp135128_c0_seq1.path8;transcripts=comp135128_c0_seq1.mrna8
Chr1	stalkie_big_nohaplotig	mRNA	103471622	103471767	.	+	.	ID=comp135128_c0_seq1.mrna8;geneID=comp135128_c0_seq1.path8;Name=comp135128_c0_seq1;Dir=indeterminatecoverage=46.9;identity=84.2;matches=123;mismatches=23;indels=0;unknowns=0;Target=comp135128_c0_seq1 309 164 .;CDS_Target=comp135128_c0_seq1 215 165 .;locus=RLOC_00009878
Chr1	stalkie_big_nohaplotig	exon	103471622	103471767	84	+	.	Parent=comp135128_c0_seq1.mrna8
Chr1	stalkie_big_nohaplotig	CDS	103471623	103471673	.	+	0	Parent=comp135128_c0_seq1.mrna8
Chr1	gffcl	locus	103558589	103561079	.	-	.	ID=RLOC_00009880;geneIDs=FBgn0050360.1.path2,comp146420_c0_seq1.path1,comp150213_c0_seq1.path2;transcripts=FBgn0050360.1.mrna2,comp150213_c0_seq1.mrna2,comp146420_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	103558589	103561079	.	-	.	ID=FBgn0050360.1.mrna2;geneID=FBgn0050360.1.path2;Name=FBgn0050360.1;Dir=sensecoverage=99.8;identity=99.3;matches=1805;mismatches=13;indels=0;unknowns=0;locus=RLOC_00009880
Chr1	stalkie_big_nohaplotig	exon	103558589	103558652	100	-	.	Parent=FBgn0050360.1.mrna2;Target=FBgn0050360.1 1758 1821 +
Chr1	stalkie_big_nohaplotig	exon	103558740	103558880	99	-	.	Parent=FBgn0050360.1.mrna2;Target=FBgn0050360.1 1617 1757 +
Chr1	stalkie_big_nohaplotig	exon	103559052	103559395	99	-	.	Parent=FBgn0050360.1.mrna2;Target=FBgn0050360.1 1273 1616 +
Chr1	stalkie_big_nohaplotig	exon	103559448	103559555	100	-	.	Parent=FBgn0050360.1.mrna2;Target=FBgn0050360.1 1165 1272 +
Chr1	stalkie_big_nohaplotig	exon	103559635	103560228	99	-	.	Parent=FBgn0050360.1.mrna2;Target=FBgn0050360.1 571 1164 +
Chr1	stalkie_big_nohaplotig	exon	103560513	103561079	98	-	.	Parent=FBgn0050360.1.mrna2;Target=FBgn0050360.1 4 570 +
Chr1	stalkie_big_nohaplotig	CDS	103558589	103558652	.	-	1	Parent=FBgn0050360.1.mrna2;Target=FBgn0050360.1 1758 1821 +
Chr1	stalkie_big_nohaplotig	CDS	103558740	103558880	.	-	1	Parent=FBgn0050360.1.mrna2;Target=FBgn0050360.1 1617 1757 +
Chr1	stalkie_big_nohaplotig	CDS	103559052	103559395	.	-	0	Parent=FBgn0050360.1.mrna2;Target=FBgn0050360.1 1273 1616 +
Chr1	stalkie_big_nohaplotig	CDS	103559448	103559555	.	-	0	Parent=FBgn0050360.1.mrna2;Target=FBgn0050360.1 1165 1272 +
Chr1	stalkie_big_nohaplotig	CDS	103559635	103560228	.	-	0	Parent=FBgn0050360.1.mrna2;Target=FBgn0050360.1 571 1164 +
Chr1	stalkie_big_nohaplotig	CDS	103560513	103561079	.	-	0	Parent=FBgn0050360.1.mrna2;Target=FBgn0050360.1 4 570 +
Chr1	stalkie_big_nohaplotig	mRNA	103558835	103559075	.	-	.	ID=comp150213_c0_seq1.mrna2;geneID=comp150213_c0_seq1.path2;Name=comp150213_c0_seq1;Dir=indeterminatecoverage=99.6;identity=96.3;matches=232;mismatches=9;indels=0;unknowns=0;Target=comp150213_c0_seq1 241 1 .;CDS_Target=comp150213_c0_seq1 239 126 .;locus=RLOC_00009880
Chr1	stalkie_big_nohaplotig	exon	103558835	103559075	96	-	.	Parent=comp150213_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	103558837	103558950	.	-	0	Parent=comp150213_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	103560206	103560536	.	-	.	ID=comp146420_c0_seq1.mrna1;geneID=comp146420_c0_seq1.path1;Name=comp146420_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.2;matches=318;mismatches=11;indels=5;unknowns=0;Target=comp146420_c0_seq1 332 1 .;CDS_Target=comp146420_c0_seq1 189 157 .;locus=RLOC_00009880
Chr1	stalkie_big_nohaplotig	exon	103560206	103560536	95	-	.	Parent=comp146420_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	103560349	103560381	.	-	0	Parent=comp146420_c0_seq1.mrna1
Chr1	gffcl	locus	103712137	103714290	.	+	.	ID=RLOC_00009883;geneIDs=comp151166_c1_seq1.path1;transcripts=comp151166_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	103712137	103714290	.	+	.	ID=comp151166_c1_seq1.mrna1;geneID=comp151166_c1_seq1.path1;Name=comp151166_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1223;mismatches=4;indels=0;unknowns=0;locus=RLOC_00009883
Chr1	stalkie_big_nohaplotig	exon	103712137	103712217	100	+	.	Parent=comp151166_c1_seq1.mrna1;Target=comp151166_c1_seq1 81 1 .
Chr1	stalkie_big_nohaplotig	exon	103713145	103714290	99	+	.	Parent=comp151166_c1_seq1.mrna1;Target=comp151166_c1_seq1 1227 82 .
Chr1	stalkie_big_nohaplotig	CDS	103712138	103712217	.	+	0	Parent=comp151166_c1_seq1.mrna1;Target=comp151166_c1_seq1 81 2 .
Chr1	stalkie_big_nohaplotig	CDS	103713145	103713388	.	+	1	Parent=comp151166_c1_seq1.mrna1;Target=comp151166_c1_seq1 325 82 .
Chr1	gffcl	locus	103769616	103770868	.	-	.	ID=RLOC_00009884;geneIDs=AAEL017378.path2;transcripts=AAEL017378.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	103769616	103770868	.	-	.	ID=AAEL017378.mrna2;geneID=AAEL017378.path2;Name=AAEL017378;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1244;mismatches=9;indels=1;unknowns=0;Target=AAEL017378 1254 1 .;locus=RLOC_00009884
Chr1	stalkie_big_nohaplotig	exon	103769616	103770868	99	-	.	Parent=AAEL017378.mrna2
Chr1	stalkie_big_nohaplotig	CDS	103769616	103770868	.	-	0	Parent=AAEL017378.mrna2
Chr1	gffcl	locus	103776278	103786432	.	+	.	ID=RLOC_00009885;geneIDs=FBgn0025612.1.path2;transcripts=FBgn0025612.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	103776278	103786432	.	+	.	ID=FBgn0025612.1.mrna2;geneID=FBgn0025612.1.path2;Name=FBgn0025612.1;Dir=sensecoverage=85.6;identity=99.8;matches=410;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009885
Chr1	stalkie_big_nohaplotig	exon	103776278	103776414	100	+	.	Parent=FBgn0025612.1.mrna2;Target=FBgn0025612.1 70 206 +
Chr1	stalkie_big_nohaplotig	exon	103786159	103786432	99	+	.	Parent=FBgn0025612.1.mrna2;Target=FBgn0025612.1 207 480 +
Chr1	stalkie_big_nohaplotig	CDS	103776278	103776414	.	+	0	Parent=FBgn0025612.1.mrna2;Target=FBgn0025612.1 70 206 +
Chr1	stalkie_big_nohaplotig	CDS	103786159	103786432	.	+	1	Parent=FBgn0025612.1.mrna2;Target=FBgn0025612.1 207 480 +
Chr1	gffcl	locus	103776675	103778442	.	+	.	ID=RLOC_00009886;geneIDs=FBgn0025613.1.path1;transcripts=FBgn0025613.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	103776675	103778442	.	+	.	ID=FBgn0025613.1.mrna1;geneID=FBgn0025613.1.path1;Name=FBgn0025613.1;Dir=sensecoverage=100.0;identity=99.8;matches=1673;mismatches=4;indels=0;unknowns=0;locus=RLOC_00009886
Chr1	stalkie_big_nohaplotig	exon	103776675	103776809	100	+	.	Parent=FBgn0025613.1.mrna1;Target=FBgn0025613.1 1 135 +
Chr1	stalkie_big_nohaplotig	exon	103776901	103778442	99	+	.	Parent=FBgn0025613.1.mrna1;Target=FBgn0025613.1 136 1677 +
Chr1	stalkie_big_nohaplotig	CDS	103776675	103776809	.	+	0	Parent=FBgn0025613.1.mrna1;Target=FBgn0025613.1 1 135 +
Chr1	stalkie_big_nohaplotig	CDS	103776901	103778442	.	+	0	Parent=FBgn0025613.1.mrna1;Target=FBgn0025613.1 136 1677 +
Chr1	gffcl	locus	103796828	103798470	.	-	.	ID=RLOC_00009887;geneIDs=FBgn0025739.1.path1;transcripts=FBgn0025739.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	103796828	103798470	.	-	.	ID=FBgn0025739.1.mrna1;geneID=FBgn0025739.1.path1;Name=FBgn0025739.1;Dir=sensecoverage=100.0;identity=99.9;matches=1589;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009887
Chr1	stalkie_big_nohaplotig	exon	103796828	103798024	100	-	.	Parent=FBgn0025739.1.mrna1;Target=FBgn0025739.1 394 1590 +
Chr1	stalkie_big_nohaplotig	exon	103798078	103798470	99	-	.	Parent=FBgn0025739.1.mrna1;Target=FBgn0025739.1 1 393 +
Chr1	stalkie_big_nohaplotig	CDS	103796828	103798024	.	-	0	Parent=FBgn0025739.1.mrna1;Target=FBgn0025739.1 394 1590 +
Chr1	stalkie_big_nohaplotig	CDS	103798078	103798470	.	-	0	Parent=FBgn0025739.1.mrna1;Target=FBgn0025739.1 1 393 +
Chr1	gffcl	locus	103964897	103965343	.	+	.	ID=RLOC_00009889;geneIDs=Dp_FBgn0245412.2.path4;transcripts=Dp_FBgn0245412.2.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	103964897	103965343	.	+	.	ID=Dp_FBgn0245412.2.mrna4;geneID=Dp_FBgn0245412.2.path4;Name=Dp_FBgn0245412.2;Dir=indeterminatecoverage=100.0;identity=98.9;matches=442;mismatches=5;indels=0;unknowns=0;Target=Dp_FBgn0245412.2 447 1 .;locus=RLOC_00009889
Chr1	stalkie_big_nohaplotig	exon	103964897	103965343	98	+	.	Parent=Dp_FBgn0245412.2.mrna4
Chr1	stalkie_big_nohaplotig	CDS	103964897	103965343	.	+	0	Parent=Dp_FBgn0245412.2.mrna4
Chr1	gffcl	locus	104029185	104029546	.	+	.	ID=RLOC_00009891;geneIDs=comp151573_c1_seq1.path8;transcripts=comp151573_c1_seq1.mrna8
Chr1	stalkie_big_nohaplotig	mRNA	104029185	104029546	.	+	.	ID=comp151573_c1_seq1.mrna8;geneID=comp151573_c1_seq1.path8;Name=comp151573_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=358;mismatches=4;indels=0;unknowns=0;Target=comp151573_c1_seq1 362 1 .;CDS_Target=comp151573_c1_seq1 120 1 .;locus=RLOC_00009891
Chr1	stalkie_big_nohaplotig	exon	104029185	104029546	98	+	.	Parent=comp151573_c1_seq1.mrna8
Chr1	stalkie_big_nohaplotig	CDS	104029185	104029304	.	+	0	Parent=comp151573_c1_seq1.mrna8
Chr1	gffcl	locus	104062903	104063364	.	+	.	ID=RLOC_00009893;geneIDs=comp149583_c0_seq1.path1;transcripts=comp149583_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	104062903	104063364	.	+	.	ID=comp149583_c0_seq1.mrna1;geneID=comp149583_c0_seq1.path1;Name=comp149583_c0_seq1;Dir=sensecoverage=99.2;identity=97.7;matches=386;mismatches=9;indels=0;unknowns=0;locus=RLOC_00009893
Chr1	stalkie_big_nohaplotig	exon	104062903	104063152	96	+	.	Parent=comp149583_c0_seq1.mrna1;Target=comp149583_c0_seq1 1 250 +
Chr1	stalkie_big_nohaplotig	exon	104063220	104063364	99	+	.	Parent=comp149583_c0_seq1.mrna1;Target=comp149583_c0_seq1 251 395 +
Chr1	stalkie_big_nohaplotig	CDS	104062903	104063152	.	+	0	Parent=comp149583_c0_seq1.mrna1;Target=comp149583_c0_seq1 1 250 +
Chr1	stalkie_big_nohaplotig	CDS	104063220	104063290	.	+	2	Parent=comp149583_c0_seq1.mrna1;Target=comp149583_c0_seq1 251 321 +
Chr1	gffcl	locus	104199531	104199892	.	+	.	ID=RLOC_00009898;geneIDs=comp151573_c1_seq1.path5;transcripts=comp151573_c1_seq1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	104199531	104199892	.	+	.	ID=comp151573_c1_seq1.mrna5;geneID=comp151573_c1_seq1.path5;Name=comp151573_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=359;mismatches=3;indels=0;unknowns=0;Target=comp151573_c1_seq1 362 1 .;CDS_Target=comp151573_c1_seq1 120 1 .;locus=RLOC_00009898
Chr1	stalkie_big_nohaplotig	exon	104199531	104199892	99	+	.	Parent=comp151573_c1_seq1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	104199531	104199650	.	+	0	Parent=comp151573_c1_seq1.mrna5
Chr1	gffcl	locus	104201896	104202909	.	-	.	ID=RLOC_00009899;geneIDs=comp157935_c0_seq1.path1;transcripts=comp157935_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	104201896	104202909	.	-	.	ID=comp157935_c0_seq1.mrna1;geneID=comp157935_c0_seq1.path1;Name=comp157935_c0_seq1;Dir=indeterminatecoverage=95.4;identity=93.5;matches=858;mismatches=54;indels=6;unknowns=0;locus=RLOC_00009899
Chr1	stalkie_big_nohaplotig	exon	104201896	104202081	91	-	.	Parent=comp157935_c0_seq1.mrna1;Target=comp157935_c0_seq1 949 763 .
Chr1	stalkie_big_nohaplotig	exon	104202105	104202771	93	-	.	Parent=comp157935_c0_seq1.mrna1;Target=comp157935_c0_seq1 749 78 .
Chr1	stalkie_big_nohaplotig	exon	104202851	104202909	94	-	.	Parent=comp157935_c0_seq1.mrna1;Target=comp157935_c0_seq1 59 1 .
Chr1	stalkie_big_nohaplotig	CDS	104202075	104202081	.	-	2	Parent=comp157935_c0_seq1.mrna1;Target=comp157935_c0_seq1 769 763 .
Chr1	stalkie_big_nohaplotig	CDS	104202105	104202189	.	-	0	Parent=comp157935_c0_seq1.mrna1;Target=comp157935_c0_seq1 749 665 .
Chr1	gffcl	locus	104301192	104302331	.	+	.	ID=RLOC_00009902;geneIDs=ORF1322.path2;transcripts=ORF1322.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	104301192	104302331	.	+	.	ID=ORF1322.mrna2;geneID=ORF1322.path2;Name=ORF1322;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1135;mismatches=5;indels=0;unknowns=0;Target=ORF1322 1140 1 .;locus=RLOC_00009902
Chr1	stalkie_big_nohaplotig	exon	104301192	104302331	99	+	.	Parent=ORF1322.mrna2
Chr1	stalkie_big_nohaplotig	CDS	104301192	104302331	.	+	0	Parent=ORF1322.mrna2
Chr1	gffcl	locus	104322724	104323129	.	-	.	ID=RLOC_00009903;geneIDs=comp147232_c0_seq1.path5;transcripts=comp147232_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	104322724	104323129	.	-	.	ID=comp147232_c0_seq1.mrna5;geneID=comp147232_c0_seq1.path5;Name=comp147232_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.5;matches=406;mismatches=0;indels=2;unknowns=0;Target=comp147232_c0_seq1 413 6 .;CDS_Target=comp147232_c0_seq1 279 136 .;locus=RLOC_00009903
Chr1	stalkie_big_nohaplotig	exon	104322724	104323129	99	-	.	Parent=comp147232_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	104322858	104323000	.	-	0	Parent=comp147232_c0_seq1.mrna5
Chr1	gffcl	locus	104323731	104325182	.	-	.	ID=RLOC_00009904;geneIDs=comp157739_c3_seq1.path5;transcripts=comp157739_c3_seq1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	104323731	104325182	.	-	.	ID=comp157739_c3_seq1.mrna5;geneID=comp157739_c3_seq1.path5;Name=comp157739_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1443;mismatches=7;indels=8;unknowns=0;Target=comp157739_c3_seq1 1456 1 .;CDS_Target=comp157739_c3_seq1 1025 852 .;locus=RLOC_00009904
Chr1	stalkie_big_nohaplotig	exon	104323731	104325182	98	-	.	Parent=comp157739_c3_seq1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	104324162	104324334	.	-	0	Parent=comp157739_c3_seq1.mrna5
Chr1	gffcl	locus	104325975	104327195	.	-	.	ID=RLOC_00009905;geneIDs=comp161809_c0_seq1.path1;transcripts=comp161809_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	104325975	104327195	.	-	.	ID=comp161809_c0_seq1.mrna1;geneID=comp161809_c0_seq1.path1;Name=comp161809_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1221;mismatches=0;indels=0;unknowns=0;Target=comp161809_c0_seq1 1221 1 .;CDS_Target=comp161809_c0_seq1 941 759 .;locus=RLOC_00009905
Chr1	stalkie_big_nohaplotig	exon	104325975	104327195	100	-	.	Parent=comp161809_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	104326255	104326437	.	-	0	Parent=comp161809_c0_seq1.mrna1
Chr1	gffcl	locus	104345392	104345870	.	-	.	ID=RLOC_00009908;geneIDs=comp157122_c0_seq1.path5;transcripts=comp157122_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	104345392	104345870	.	-	.	ID=comp157122_c0_seq1.mrna5;geneID=comp157122_c0_seq1.path5;Name=comp157122_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=471;mismatches=8;indels=1;unknowns=0;Target=comp157122_c0_seq1 480 1 .;CDS_Target=comp157122_c0_seq1 480 244 .;locus=RLOC_00009908
Chr1	stalkie_big_nohaplotig	exon	104345392	104345870	98	-	.	Parent=comp157122_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	104345392	104345628	.	-	0	Parent=comp157122_c0_seq1.mrna5
Chr1	gffcl	locus	104367148	106150455	.	+	.	ID=RLOC_00009909;geneIDs=FBgn0261444.path2,comp144321_c0_seq1.path1,comp161311_c0_seq1.path1;transcripts=comp161311_c0_seq1.mrna1,comp144321_c0_seq1.mrna1,FBgn0261444.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	104367148	106150455	.	+	.	ID=comp161311_c0_seq1.mrna1;geneID=comp161311_c0_seq1.path1;Name=comp161311_c0_seq1;Dir=antisensecoverage=84.7;identity=93.4;matches=2549;mismatches=122;indels=58;unknowns=0;locus=RLOC_00009909
Chr1	stalkie_big_nohaplotig	exon	104367148	104367158	61	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 3482 3499 -
Chr1	stalkie_big_nohaplotig	exon	104379307	104379315	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 3473 3481 -
Chr1	stalkie_big_nohaplotig	exon	104379326	104379334	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 3418 3426 -
Chr1	stalkie_big_nohaplotig	exon	104381528	104381530	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 3415 3417 -
Chr1	stalkie_big_nohaplotig	exon	104395554	104395609	50	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 3310 3377 -
Chr1	stalkie_big_nohaplotig	exon	104396962	104396963	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 3308 3309 -
Chr1	stalkie_big_nohaplotig	exon	104404073	104404074	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 3306 3307 -
Chr1	stalkie_big_nohaplotig	exon	104411545	104411552	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 3266 3273 -
Chr1	stalkie_big_nohaplotig	exon	104422209	104422216	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 3258 3265 -
Chr1	stalkie_big_nohaplotig	exon	104444775	104444784	90	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 3248 3257 -
Chr1	stalkie_big_nohaplotig	exon	104446975	104446976	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 3246 3247 -
Chr1	stalkie_big_nohaplotig	exon	104447469	104447523	54	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 3196 3245 -
Chr1	stalkie_big_nohaplotig	exon	104451610	104451617	87	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 3188 3195 -
Chr1	stalkie_big_nohaplotig	exon	104459061	104459068	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 3180 3187 -
Chr1	stalkie_big_nohaplotig	exon	104466607	104466619	92	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 3167 3179 -
Chr1	stalkie_big_nohaplotig	exon	104474714	104474727	92	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 3153 3166 -
Chr1	stalkie_big_nohaplotig	exon	104477785	104477787	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 3150 3152 -
Chr1	stalkie_big_nohaplotig	exon	104479913	104479916	50	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 3148 3149 -
Chr1	stalkie_big_nohaplotig	exon	104508546	104508552	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 3014 3020 -
Chr1	stalkie_big_nohaplotig	exon	104526542	104526548	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 3007 3013 -
Chr1	stalkie_big_nohaplotig	exon	104585523	104585549	74	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2981 3006 -
Chr1	stalkie_big_nohaplotig	exon	104585559	104585574	82	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2933 2949 -
Chr1	stalkie_big_nohaplotig	exon	104656387	104656395	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2924 2932 -
Chr1	stalkie_big_nohaplotig	exon	104657300	104657305	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2918 2923 -
Chr1	stalkie_big_nohaplotig	exon	104665983	104665984	50	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2916 2917 -
Chr1	stalkie_big_nohaplotig	exon	104674110	104674127	94	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2898 2915 -
Chr1	stalkie_big_nohaplotig	exon	104681386	104681390	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2893 2897 -
Chr1	stalkie_big_nohaplotig	exon	104708560	104708561	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2891 2892 -
Chr1	stalkie_big_nohaplotig	exon	104716472	104716479	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2883 2890 -
Chr1	stalkie_big_nohaplotig	exon	104718768	104718776	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2874 2882 -
Chr1	stalkie_big_nohaplotig	exon	104721631	104721641	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2863 2873 -
Chr1	stalkie_big_nohaplotig	exon	104737973	104738003	58	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2837 2862 -
Chr1	stalkie_big_nohaplotig	exon	104754130	104754138	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2812 2820 -
Chr1	stalkie_big_nohaplotig	exon	104760923	104760933	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2764 2774 -
Chr1	stalkie_big_nohaplotig	exon	104761674	104761676	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2761 2763 -
Chr1	stalkie_big_nohaplotig	exon	104765255	104765260	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2755 2760 -
Chr1	stalkie_big_nohaplotig	exon	104765815	104765825	90	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2738 2748 -
Chr1	stalkie_big_nohaplotig	exon	104771192	104771207	87	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2722 2737 -
Chr1	stalkie_big_nohaplotig	exon	104772185	104772191	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2715 2721 -
Chr1	stalkie_big_nohaplotig	exon	104783306	104783311	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2709 2714 -
Chr1	stalkie_big_nohaplotig	exon	104784060	104784061	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2707 2708 -
Chr1	stalkie_big_nohaplotig	exon	104788352	104788354	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2704 2706 -
Chr1	stalkie_big_nohaplotig	exon	104789981	104789983	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2701 2703 -
Chr1	stalkie_big_nohaplotig	exon	104797311	104797371	44	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2649 2700 -
Chr1	stalkie_big_nohaplotig	exon	104801767	104801780	85	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2577 2590 -
Chr1	stalkie_big_nohaplotig	exon	104813557	104813562	83	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2571 2576 -
Chr1	stalkie_big_nohaplotig	exon	104833875	104833882	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2562 2569 -
Chr1	stalkie_big_nohaplotig	exon	104833905	104833913	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2513 2521 -
Chr1	stalkie_big_nohaplotig	exon	104848413	104848417	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2508 2512 -
Chr1	stalkie_big_nohaplotig	exon	104863702	104863713	66	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2499 2507 -
Chr1	stalkie_big_nohaplotig	exon	104872746	104872758	92	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2472 2484 -
Chr1	stalkie_big_nohaplotig	exon	104875725	104875727	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2469 2471 -
Chr1	stalkie_big_nohaplotig	exon	104879160	104879171	91	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2457 2468 -
Chr1	stalkie_big_nohaplotig	exon	104885266	104885274	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2399 2407 -
Chr1	stalkie_big_nohaplotig	exon	104922275	104922282	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2330 2337 -
Chr1	stalkie_big_nohaplotig	exon	104930919	104930984	48	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2209 2271 -
Chr1	stalkie_big_nohaplotig	exon	104941103	104941106	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 2205 2208 -
Chr1	stalkie_big_nohaplotig	exon	106141454	106141685	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 1775 2006 -
Chr1	stalkie_big_nohaplotig	exon	106141738	106141989	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 1523 1774 -
Chr1	stalkie_big_nohaplotig	exon	106147711	106147829	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 1404 1522 -
Chr1	stalkie_big_nohaplotig	exon	106147930	106148202	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 1131 1403 -
Chr1	stalkie_big_nohaplotig	exon	106148279	106148608	100	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 801 1130 -
Chr1	stalkie_big_nohaplotig	exon	106149656	106150455	99	+	.	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 1 800 -
Chr1	stalkie_big_nohaplotig	CDS	106141491	106141685	.	+	0	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 1775 1969 .
Chr1	stalkie_big_nohaplotig	CDS	106141738	106141989	.	+	0	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 1523 1774 .
Chr1	stalkie_big_nohaplotig	CDS	106147711	106147829	.	+	0	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 1404 1522 .
Chr1	stalkie_big_nohaplotig	CDS	106147930	106148202	.	+	1	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 1131 1403 .
Chr1	stalkie_big_nohaplotig	CDS	106148279	106148608	.	+	1	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 801 1130 .
Chr1	stalkie_big_nohaplotig	CDS	106149656	106149791	.	+	1	Parent=comp161311_c0_seq1.mrna1;Target=comp161311_c0_seq1 665 800 .
Chr1	stalkie_big_nohaplotig	mRNA	104783679	104784287	.	+	.	ID=comp144321_c0_seq1.mrna1;geneID=comp144321_c0_seq1.path1;Name=comp144321_c0_seq1;Dir=antisensecoverage=95.9;identity=100.0;matches=538;mismatches=0;indels=0;unknowns=0;Target=comp144321_c0_seq1 368 538 .;locus=RLOC_00009909
Chr1	stalkie_big_nohaplotig	exon	104783679	104783878	100	+	.	Parent=comp144321_c0_seq1.mrna1;Target=comp144321_c0_seq1 339 538 -
Chr1	stalkie_big_nohaplotig	exon	104783950	104784287	100	+	.	Parent=comp144321_c0_seq1.mrna1;Target=comp144321_c0_seq1 1 338 -
Chr1	stalkie_big_nohaplotig	CDS	104783679	104783849	.	+	0	Parent=comp144321_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106141458	106149788	.	+	.	ID=FBgn0261444.mrna2;geneID=FBgn0261444.path2;Name=FBgn0261444;Dir=sensecoverage=73.5;identity=100.0;matches=1215;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009909
Chr1	stalkie_big_nohaplotig	exon	106141458	106141685	100	+	.	Parent=FBgn0261444.mrna2;Target=FBgn0261444 439 666 +
Chr1	stalkie_big_nohaplotig	exon	106141738	106141989	100	+	.	Parent=FBgn0261444.mrna2;Target=FBgn0261444 667 918 +
Chr1	stalkie_big_nohaplotig	exon	106147711	106147829	100	+	.	Parent=FBgn0261444.mrna2;Target=FBgn0261444 919 1037 +
Chr1	stalkie_big_nohaplotig	exon	106147930	106148202	100	+	.	Parent=FBgn0261444.mrna2;Target=FBgn0261444 1038 1310 +
Chr1	stalkie_big_nohaplotig	exon	106148279	106148488	100	+	.	Parent=FBgn0261444.mrna2;Target=FBgn0261444 1311 1520 +
Chr1	stalkie_big_nohaplotig	exon	106149656	106149788	100	+	.	Parent=FBgn0261444.mrna2;Target=FBgn0261444 1521 1653 +
Chr1	gffcl	locus	104383355	104630038	.	-	.	ID=RLOC_00009910;geneIDs=FBgn0004650.1.path1;transcripts=FBgn0004650.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	104383355	104630038	.	-	.	ID=FBgn0004650.1.mrna1;geneID=FBgn0004650.1.path1;Name=FBgn0004650.1;Dir=sensecoverage=99.9;identity=100.0;matches=3919;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009910
Chr1	stalkie_big_nohaplotig	exon	104383355	104383572	100	-	.	Parent=FBgn0004650.1.mrna1;Target=FBgn0004650.1 3704 3921 +
Chr1	stalkie_big_nohaplotig	exon	104383680	104385411	100	-	.	Parent=FBgn0004650.1.mrna1;Target=FBgn0004650.1 1972 3703 +
Chr1	stalkie_big_nohaplotig	exon	104627955	104628085	100	-	.	Parent=FBgn0004650.1.mrna1;Target=FBgn0004650.1 1841 1971 +
Chr1	stalkie_big_nohaplotig	exon	104628145	104628274	100	-	.	Parent=FBgn0004650.1.mrna1;Target=FBgn0004650.1 1711 1840 +
Chr1	stalkie_big_nohaplotig	exon	104628331	104630038	100	-	.	Parent=FBgn0004650.1.mrna1;Target=FBgn0004650.1 3 1710 +
Chr1	stalkie_big_nohaplotig	CDS	104383355	104383572	.	-	2	Parent=FBgn0004650.1.mrna1;Target=FBgn0004650.1 3704 3921 +
Chr1	stalkie_big_nohaplotig	CDS	104383680	104385411	.	-	0	Parent=FBgn0004650.1.mrna1;Target=FBgn0004650.1 1972 3703 +
Chr1	stalkie_big_nohaplotig	CDS	104627955	104628085	.	-	2	Parent=FBgn0004650.1.mrna1;Target=FBgn0004650.1 1841 1971 +
Chr1	stalkie_big_nohaplotig	CDS	104628145	104628274	.	-	0	Parent=FBgn0004650.1.mrna1;Target=FBgn0004650.1 1711 1840 +
Chr1	stalkie_big_nohaplotig	CDS	104628331	104630037	.	-	0	Parent=FBgn0004650.1.mrna1;Target=FBgn0004650.1 4 1710 +
Chr1	gffcl	locus	104455161	105221361	.	-	.	ID=RLOC_00009912;geneIDs=FBgn0024366.1.path1,comp145536_c0_seq1.path1,comp162995_c4_seq1.path1;transcripts=comp162995_c4_seq1.mrna1,FBgn0024366.1.mrna1,comp145536_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	104455161	105221361	.	-	.	ID=comp162995_c4_seq1.mrna1;geneID=comp162995_c4_seq1.path1;Name=comp162995_c4_seq1;Dir=antisensecoverage=95.0;identity=90.9;matches=1020;mismatches=31;indels=71;unknowns=0;locus=RLOC_00009912
Chr1	stalkie_big_nohaplotig	exon	104455161	104455391	100	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 7 237 -
Chr1	stalkie_big_nohaplotig	exon	104455783	104456135	99	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 238 590 -
Chr1	stalkie_big_nohaplotig	exon	104457049	104457288	93	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 591 835 -
Chr1	stalkie_big_nohaplotig	exon	105018668	105018673	66	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 836 841 -
Chr1	stalkie_big_nohaplotig	exon	105025239	105025250	91	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 842 853 -
Chr1	stalkie_big_nohaplotig	exon	105055454	105055464	100	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 956 966 -
Chr1	stalkie_big_nohaplotig	exon	105064202	105064203	100	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 967 968 -
Chr1	stalkie_big_nohaplotig	exon	105067136	105067142	100	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 969 975 -
Chr1	stalkie_big_nohaplotig	exon	105073367	105073372	100	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 976 981 -
Chr1	stalkie_big_nohaplotig	exon	105074134	105074141	100	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 982 989 -
Chr1	stalkie_big_nohaplotig	exon	105074172	105074181	100	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 1036 1045 -
Chr1	stalkie_big_nohaplotig	exon	105078213	105078223	100	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 1046 1056 -
Chr1	stalkie_big_nohaplotig	exon	105084193	105084200	100	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 1069 1076 -
Chr1	stalkie_big_nohaplotig	exon	105089191	105089198	100	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 1077 1084 -
Chr1	stalkie_big_nohaplotig	exon	105096549	105096550	100	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 1085 1086 -
Chr1	stalkie_big_nohaplotig	exon	105100961	105100970	100	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 1087 1096 -
Chr1	stalkie_big_nohaplotig	exon	105125197	105125207	90	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 1097 1107 -
Chr1	stalkie_big_nohaplotig	exon	105144824	105144832	100	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 1108 1116 -
Chr1	stalkie_big_nohaplotig	exon	105147604	105147621	30	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 1160 1211 -
Chr1	stalkie_big_nohaplotig	exon	105150551	105150592	49	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 1212 1276 -
Chr1	stalkie_big_nohaplotig	exon	105154351	105154356	100	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 1320 1325 -
Chr1	stalkie_big_nohaplotig	exon	105157113	105157123	100	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 1326 1336 -
Chr1	stalkie_big_nohaplotig	exon	105214351	105214356	100	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 1385 1390 -
Chr1	stalkie_big_nohaplotig	exon	105214431	105214435	100	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 1391 1395 -
Chr1	stalkie_big_nohaplotig	exon	105221339	105221361	60	-	.	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 1396 1409 -
Chr1	stalkie_big_nohaplotig	CDS	104455225	104455391	.	-	2	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 71 237 .
Chr1	stalkie_big_nohaplotig	CDS	104455783	104455951	.	-	0	Parent=comp162995_c4_seq1.mrna1;Target=comp162995_c4_seq1 238 406 .
Chr1	stalkie_big_nohaplotig	mRNA	105083839	105088529	.	-	.	ID=FBgn0024366.1.mrna1;geneID=FBgn0024366.1.path1;Name=FBgn0024366.1;Dir=sensecoverage=98.9;identity=100.0;matches=4253;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009912
Chr1	stalkie_big_nohaplotig	exon	105083839	105087717	100	-	.	Parent=FBgn0024366.1.mrna1;Target=FBgn0024366.1 424 4302 +
Chr1	stalkie_big_nohaplotig	exon	105088094	105088244	100	-	.	Parent=FBgn0024366.1.mrna1;Target=FBgn0024366.1 273 423 +
Chr1	stalkie_big_nohaplotig	exon	105088307	105088529	100	-	.	Parent=FBgn0024366.1.mrna1;Target=FBgn0024366.1 50 272 +
Chr1	stalkie_big_nohaplotig	CDS	105083839	105087717	.	-	0	Parent=FBgn0024366.1.mrna1;Target=FBgn0024366.1 424 4302 +
Chr1	stalkie_big_nohaplotig	CDS	105088094	105088244	.	-	1	Parent=FBgn0024366.1.mrna1;Target=FBgn0024366.1 273 423 +
Chr1	stalkie_big_nohaplotig	CDS	105088307	105088527	.	-	0	Parent=FBgn0024366.1.mrna1;Target=FBgn0024366.1 52 272 +
Chr1	gffcl	locus	104487339	104487379	.	-	.	ID=RLOC_00009915;geneIDs=comp150995_c1_seq1.path2;transcripts=comp150995_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	104487339	104487379	.	-	.	ID=comp150995_c1_seq1.mrna2;geneID=comp150995_c1_seq1.path2;Name=comp150995_c1_seq1;Dir=indeterminatecoverage=8.8;identity=100.0;matches=41;mismatches=0;indels=0;unknowns=0;Target=comp150995_c1_seq1 464 424 .;locus=RLOC_00009915
Chr1	stalkie_big_nohaplotig	exon	104487339	104487379	100	-	.	Parent=comp150995_c1_seq1.mrna2
Chr1	gffcl	locus	104499619	104501403	.	+	.	ID=RLOC_00009916;geneIDs=FBgn0052649.1.path1;transcripts=FBgn0052649.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	104499619	104501403	.	+	.	ID=FBgn0052649.1.mrna1;geneID=FBgn0052649.1.path1;Name=FBgn0052649.1;Dir=sensecoverage=81.4;identity=100.0;matches=1629;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009916
Chr1	stalkie_big_nohaplotig	exon	104499619	104500719	100	+	.	Parent=FBgn0052649.1.mrna1;Target=FBgn0052649.1 1 1101 +
Chr1	stalkie_big_nohaplotig	exon	104500773	104500931	100	+	.	Parent=FBgn0052649.1.mrna1;Target=FBgn0052649.1 1102 1260 +
Chr1	stalkie_big_nohaplotig	exon	104500979	104501169	100	+	.	Parent=FBgn0052649.1.mrna1;Target=FBgn0052649.1 1261 1451 +
Chr1	stalkie_big_nohaplotig	exon	104501226	104501403	100	+	.	Parent=FBgn0052649.1.mrna1;Target=FBgn0052649.1 1452 1629 +
Chr1	stalkie_big_nohaplotig	CDS	104499619	104500719	.	+	0	Parent=FBgn0052649.1.mrna1;Target=FBgn0052649.1 1 1101 +
Chr1	stalkie_big_nohaplotig	CDS	104500773	104500931	.	+	0	Parent=FBgn0052649.1.mrna1;Target=FBgn0052649.1 1102 1260 +
Chr1	stalkie_big_nohaplotig	CDS	104500979	104501169	.	+	0	Parent=FBgn0052649.1.mrna1;Target=FBgn0052649.1 1261 1451 +
Chr1	stalkie_big_nohaplotig	CDS	104501226	104501403	.	+	1	Parent=FBgn0052649.1.mrna1;Target=FBgn0052649.1 1452 1629 +
Chr1	gffcl	locus	104520971	104521452	.	-	.	ID=RLOC_00009918;geneIDs=comp152975_c0_seq1.path3;transcripts=comp152975_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	104520971	104521452	.	-	.	ID=comp152975_c0_seq1.mrna3;geneID=comp152975_c0_seq1.path3;Name=comp152975_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=478;mismatches=4;indels=0;unknowns=0;Target=comp152975_c0_seq1 482 1 .;CDS_Target=comp152975_c0_seq1 185 63 .;locus=RLOC_00009918
Chr1	stalkie_big_nohaplotig	exon	104520971	104521452	99	-	.	Parent=comp152975_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	104521268	104521390	.	-	0	Parent=comp152975_c0_seq1.mrna3
Chr1	gffcl	locus	104559055	104587287	.	+	.	ID=RLOC_00009919;geneIDs=FBgn0026080.1.path1;transcripts=FBgn0026080.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	104559055	104587287	.	+	.	ID=FBgn0026080.1.mrna1;geneID=FBgn0026080.1.path1;Name=FBgn0026080.1;Dir=sensecoverage=100.0;identity=100.0;matches=1446;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009919
Chr1	stalkie_big_nohaplotig	exon	104559055	104559120	100	+	.	Parent=FBgn0026080.1.mrna1;Target=FBgn0026080.1 1 66 +
Chr1	stalkie_big_nohaplotig	exon	104559201	104559327	100	+	.	Parent=FBgn0026080.1.mrna1;Target=FBgn0026080.1 67 193 +
Chr1	stalkie_big_nohaplotig	exon	104559387	104559628	100	+	.	Parent=FBgn0026080.1.mrna1;Target=FBgn0026080.1 194 435 +
Chr1	stalkie_big_nohaplotig	exon	104586166	104586390	100	+	.	Parent=FBgn0026080.1.mrna1;Target=FBgn0026080.1 436 660 +
Chr1	stalkie_big_nohaplotig	exon	104586446	104587017	100	+	.	Parent=FBgn0026080.1.mrna1;Target=FBgn0026080.1 661 1232 +
Chr1	stalkie_big_nohaplotig	exon	104587074	104587287	100	+	.	Parent=FBgn0026080.1.mrna1;Target=FBgn0026080.1 1233 1446 +
Chr1	stalkie_big_nohaplotig	CDS	104559055	104559120	.	+	0	Parent=FBgn0026080.1.mrna1;Target=FBgn0026080.1 1 66 +
Chr1	stalkie_big_nohaplotig	CDS	104559201	104559327	.	+	0	Parent=FBgn0026080.1.mrna1;Target=FBgn0026080.1 67 193 +
Chr1	stalkie_big_nohaplotig	CDS	104559387	104559628	.	+	2	Parent=FBgn0026080.1.mrna1;Target=FBgn0026080.1 194 435 +
Chr1	stalkie_big_nohaplotig	CDS	104586166	104586390	.	+	0	Parent=FBgn0026080.1.mrna1;Target=FBgn0026080.1 436 660 +
Chr1	stalkie_big_nohaplotig	CDS	104586446	104587017	.	+	0	Parent=FBgn0026080.1.mrna1;Target=FBgn0026080.1 661 1232 +
Chr1	stalkie_big_nohaplotig	CDS	104587074	104587287	.	+	1	Parent=FBgn0026080.1.mrna1;Target=FBgn0026080.1 1233 1446 +
Chr1	gffcl	locus	104587490	105193192	.	-	.	ID=RLOC_00009920;geneIDs=comp162792_c6_seq1.path1;transcripts=comp162792_c6_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	104587490	105193192	.	-	.	ID=comp162792_c6_seq1.mrna1;geneID=comp162792_c6_seq1.path1;Name=comp162792_c6_seq1;Dir=sensecoverage=64.6;identity=99.4;matches=902;mismatches=5;indels=0;unknowns=0;locus=RLOC_00009920
Chr1	stalkie_big_nohaplotig	exon	104587490	104587655	99	-	.	Parent=comp162792_c6_seq1.mrna1;Target=comp162792_c6_seq1 1240 1405 +
Chr1	stalkie_big_nohaplotig	exon	104587711	104588403	99	-	.	Parent=comp162792_c6_seq1.mrna1;Target=comp162792_c6_seq1 547 1239 +
Chr1	stalkie_big_nohaplotig	exon	104631793	104631817	88	-	.	Parent=comp162792_c6_seq1.mrna1;Target=comp162792_c6_seq1 522 546 +
Chr1	stalkie_big_nohaplotig	exon	105186782	105186791	100	-	.	Parent=comp162792_c6_seq1.mrna1;Target=comp162792_c6_seq1 512 521 +
Chr1	stalkie_big_nohaplotig	exon	105190412	105190416	100	-	.	Parent=comp162792_c6_seq1.mrna1;Target=comp162792_c6_seq1 507 511 +
Chr1	stalkie_big_nohaplotig	exon	105193185	105193192	100	-	.	Parent=comp162792_c6_seq1.mrna1;Target=comp162792_c6_seq1 499 506 +
Chr1	stalkie_big_nohaplotig	CDS	104587491	104587655	.	-	0	Parent=comp162792_c6_seq1.mrna1;Target=comp162792_c6_seq1 1240 1404 +
Chr1	stalkie_big_nohaplotig	CDS	104587711	104588049	.	-	0	Parent=comp162792_c6_seq1.mrna1;Target=comp162792_c6_seq1 901 1239 +
Chr1	gffcl	locus	104737010	105026199	.	+	.	ID=RLOC_00009921;geneIDs=FBgn0025641.1.path1;transcripts=FBgn0025641.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	104737010	105026199	.	+	.	ID=FBgn0025641.1.mrna1;geneID=FBgn0025641.1.path1;Name=FBgn0025641.1;Dir=sensecoverage=100.0;identity=100.0;matches=3894;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009921
Chr1	stalkie_big_nohaplotig	exon	104737010	104737039	100	+	.	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 1 30 +
Chr1	stalkie_big_nohaplotig	exon	104974568	104975089	100	+	.	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 31 552 +
Chr1	stalkie_big_nohaplotig	exon	105021501	105022049	100	+	.	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 553 1101 +
Chr1	stalkie_big_nohaplotig	exon	105022843	105023040	100	+	.	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 1102 1299 +
Chr1	stalkie_big_nohaplotig	exon	105023107	105023328	100	+	.	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 1300 1521 +
Chr1	stalkie_big_nohaplotig	exon	105023385	105023562	100	+	.	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 1522 1699 +
Chr1	stalkie_big_nohaplotig	exon	105023634	105024299	100	+	.	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 1700 2365 +
Chr1	stalkie_big_nohaplotig	exon	105024363	105024571	100	+	.	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 2366 2574 +
Chr1	stalkie_big_nohaplotig	exon	105024628	105024767	100	+	.	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 2575 2714 +
Chr1	stalkie_big_nohaplotig	exon	105024827	105024988	100	+	.	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 2715 2876 +
Chr1	stalkie_big_nohaplotig	exon	105025051	105025214	100	+	.	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 2877 3040 +
Chr1	stalkie_big_nohaplotig	exon	105025346	105026199	100	+	.	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 3041 3894 +
Chr1	stalkie_big_nohaplotig	CDS	104737010	104737039	.	+	0	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 1 30 +
Chr1	stalkie_big_nohaplotig	CDS	104974568	104975089	.	+	0	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 31 552 +
Chr1	stalkie_big_nohaplotig	CDS	105021501	105022049	.	+	0	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 553 1101 +
Chr1	stalkie_big_nohaplotig	CDS	105022843	105023040	.	+	0	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 1102 1299 +
Chr1	stalkie_big_nohaplotig	CDS	105023107	105023328	.	+	0	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 1300 1521 +
Chr1	stalkie_big_nohaplotig	CDS	105023385	105023562	.	+	0	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 1522 1699 +
Chr1	stalkie_big_nohaplotig	CDS	105023634	105024299	.	+	2	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 1700 2365 +
Chr1	stalkie_big_nohaplotig	CDS	105024363	105024571	.	+	2	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 2366 2574 +
Chr1	stalkie_big_nohaplotig	CDS	105024628	105024767	.	+	0	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 2575 2714 +
Chr1	stalkie_big_nohaplotig	CDS	105024827	105024988	.	+	1	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 2715 2876 +
Chr1	stalkie_big_nohaplotig	CDS	105025051	105025214	.	+	1	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 2877 3040 +
Chr1	stalkie_big_nohaplotig	CDS	105025346	105026199	.	+	2	Parent=FBgn0025641.1.mrna1;Target=FBgn0025641.1 3041 3894 +
Chr1	gffcl	locus	105007400	105009453	.	+	.	ID=RLOC_00009922;geneIDs=comp163899_c0_seq1.path4;transcripts=comp163899_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	105007400	105009453	.	+	.	ID=comp163899_c0_seq1.mrna4;geneID=comp163899_c0_seq1.path4;Name=comp163899_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=2047;mismatches=7;indels=3;unknowns=0;Target=comp163899_c0_seq1 2057 1 .;CDS_Target=comp163899_c0_seq1 542 393 .;locus=RLOC_00009922
Chr1	stalkie_big_nohaplotig	exon	105007400	105009453	99	+	.	Parent=comp163899_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	105007792	105007940	.	+	0	Parent=comp163899_c0_seq1.mrna4
Chr1	gffcl	locus	105140249	105141212	.	-	.	ID=RLOC_00009923;geneIDs=comp151560_c0_seq1.path1;transcripts=comp151560_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	105140249	105141212	.	-	.	ID=comp151560_c0_seq1.mrna1;geneID=comp151560_c0_seq1.path1;Name=comp151560_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=961;mismatches=3;indels=0;unknowns=0;Target=comp151560_c0_seq1 964 1 .;CDS_Target=comp151560_c0_seq1 100 2 .;locus=RLOC_00009923
Chr1	stalkie_big_nohaplotig	exon	105140249	105141212	99	-	.	Parent=comp151560_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	105141113	105141211	.	-	0	Parent=comp151560_c0_seq1.mrna1
Chr1	gffcl	locus	105147390	105148862	.	+	.	ID=RLOC_00009924;geneIDs=FBgn0032224.1.path1;transcripts=FBgn0032224.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	105147390	105148862	.	+	.	ID=FBgn0032224.1.mrna1;geneID=FBgn0032224.1.path1;Name=FBgn0032224.1;Dir=sensecoverage=100.0;identity=100.0;matches=1047;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009924
Chr1	stalkie_big_nohaplotig	exon	105147390	105147492	100	+	.	Parent=FBgn0032224.1.mrna1;Target=FBgn0032224.1 1 103 +
Chr1	stalkie_big_nohaplotig	exon	105147549	105147918	100	+	.	Parent=FBgn0032224.1.mrna1;Target=FBgn0032224.1 104 473 +
Chr1	stalkie_big_nohaplotig	exon	105148238	105148431	100	+	.	Parent=FBgn0032224.1.mrna1;Target=FBgn0032224.1 474 667 +
Chr1	stalkie_big_nohaplotig	exon	105148483	105148862	100	+	.	Parent=FBgn0032224.1.mrna1;Target=FBgn0032224.1 668 1047 +
Chr1	stalkie_big_nohaplotig	CDS	105147390	105147492	.	+	0	Parent=FBgn0032224.1.mrna1;Target=FBgn0032224.1 1 103 +
Chr1	stalkie_big_nohaplotig	CDS	105147549	105147918	.	+	2	Parent=FBgn0032224.1.mrna1;Target=FBgn0032224.1 104 473 +
Chr1	stalkie_big_nohaplotig	CDS	105148238	105148431	.	+	1	Parent=FBgn0032224.1.mrna1;Target=FBgn0032224.1 474 667 +
Chr1	stalkie_big_nohaplotig	CDS	105148483	105148862	.	+	2	Parent=FBgn0032224.1.mrna1;Target=FBgn0032224.1 668 1047 +
Chr1	gffcl	locus	105211938	105212773	.	+	.	ID=RLOC_00009927;geneIDs=comp148411_c0_seq1.path1;transcripts=comp148411_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	105211938	105212773	.	+	.	ID=comp148411_c0_seq1.mrna1;geneID=comp148411_c0_seq1.path1;Name=comp148411_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=836;mismatches=0;indels=0;unknowns=0;Target=comp148411_c0_seq1 836 1 .;CDS_Target=comp148411_c0_seq1 718 596 .;locus=RLOC_00009927
Chr1	stalkie_big_nohaplotig	exon	105211938	105212773	100	+	.	Parent=comp148411_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	105212533	105212655	.	+	0	Parent=comp148411_c0_seq1.mrna1
Chr1	gffcl	locus	105371719	105372494	.	+	.	ID=RLOC_00009929;geneIDs=FBgn0040361.1.path1;transcripts=FBgn0040361.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	105371719	105372494	.	+	.	ID=FBgn0040361.1.mrna1;geneID=FBgn0040361.1.path1;Name=FBgn0040361.1;Dir=indeterminatecoverage=99.5;identity=100.0;matches=776;mismatches=0;indels=0;unknowns=0;Target=FBgn0040361.1 780 5 .;CDS_Target=FBgn0040361.1 780 7 .;locus=RLOC_00009929
Chr1	stalkie_big_nohaplotig	exon	105371719	105372494	100	+	.	Parent=FBgn0040361.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	105371721	105372494	.	+	0	Parent=FBgn0040361.1.mrna1
Chr1	gffcl	locus	105441235	105813663	.	.	.	ID=RLOC_00009930;geneIDs=FBgn0024361.1.path1,FBgn0024364.1.path1,comp144216_c0_seq1.path1,comp145008_c0_seq1.path1,comp163002_c3_seq1.path1;transcripts=comp145008_c0_seq1.mrna1,comp163002_c3_seq1.mrna1,FBgn0024364.1.mrna1,FBgn0024361.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	105441235	105813663	.	-	.	ID=comp145008_c0_seq1.mrna1;geneID=comp145008_c0_seq1.path1;Name=comp145008_c0_seq1;Dir=indeterminatecoverage=84.5;identity=85.3;matches=1223;mismatches=93;indels=117;unknowns=0;locus=RLOC_00009930
Chr1	stalkie_big_nohaplotig	exon	105441235	105441242	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1823 1816 .
Chr1	stalkie_big_nohaplotig	exon	105444486	105444496	72	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1815 1805 .
Chr1	stalkie_big_nohaplotig	exon	105445561	105445566	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1804 1799 .
Chr1	stalkie_big_nohaplotig	exon	105449686	105449694	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1798 1790 .
Chr1	stalkie_big_nohaplotig	exon	105450628	105450636	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1789 1781 .
Chr1	stalkie_big_nohaplotig	exon	105452303	105452305	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1780 1778 .
Chr1	stalkie_big_nohaplotig	exon	105459434	105459435	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1777 1776 .
Chr1	stalkie_big_nohaplotig	exon	105462341	105462354	68	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1775 1760 .
Chr1	stalkie_big_nohaplotig	exon	105462408	105462446	40	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1759 1701 .
Chr1	stalkie_big_nohaplotig	exon	105466296	105466303	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1700 1693 .
Chr1	stalkie_big_nohaplotig	exon	105467011	105467013	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1692 1690 .
Chr1	stalkie_big_nohaplotig	exon	105474161	105474173	84	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1637 1625 .
Chr1	stalkie_big_nohaplotig	exon	105500351	105500394	52	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1586 1548 .
Chr1	stalkie_big_nohaplotig	exon	105505659	105505669	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1330 1320 .
Chr1	stalkie_big_nohaplotig	exon	105508021	105508027	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1319 1313 .
Chr1	stalkie_big_nohaplotig	exon	105625487	105625497	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1255 1245 .
Chr1	stalkie_big_nohaplotig	exon	105625564	105625593	73	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1244 1217 .
Chr1	stalkie_big_nohaplotig	exon	105635545	105635549	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1216 1212 .
Chr1	stalkie_big_nohaplotig	exon	105636839	105636842	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1211 1208 .
Chr1	stalkie_big_nohaplotig	exon	105644988	105644993	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1207 1202 .
Chr1	stalkie_big_nohaplotig	exon	105645634	105645643	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1201 1192 .
Chr1	stalkie_big_nohaplotig	exon	105646302	105646312	52	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1191 1173 .
Chr1	stalkie_big_nohaplotig	exon	105663626	105663631	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1172 1167 .
Chr1	stalkie_big_nohaplotig	exon	105671503	105671511	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1166 1158 .
Chr1	stalkie_big_nohaplotig	exon	105672679	105672682	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1157 1154 .
Chr1	stalkie_big_nohaplotig	exon	105672751	105672756	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1153 1148 .
Chr1	stalkie_big_nohaplotig	exon	105679591	105679633	51	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1147 1107 .
Chr1	stalkie_big_nohaplotig	exon	105683183	105683193	90	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1106 1096 .
Chr1	stalkie_big_nohaplotig	exon	105687914	105687915	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1095 1094 .
Chr1	stalkie_big_nohaplotig	exon	105688270	105688275	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1093 1088 .
Chr1	stalkie_big_nohaplotig	exon	105693016	105693083	33	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1087 1060 .
Chr1	stalkie_big_nohaplotig	exon	105693322	105693323	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1059 1058 .
Chr1	stalkie_big_nohaplotig	exon	105693563	105693581	84	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1057 1042 .
Chr1	stalkie_big_nohaplotig	exon	105697131	105697132	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1025 1024 .
Chr1	stalkie_big_nohaplotig	exon	105699712	105699716	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1023 1019 .
Chr1	stalkie_big_nohaplotig	exon	105699783	105699791	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1018 1010 .
Chr1	stalkie_big_nohaplotig	exon	105707055	105707063	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1009 1001 .
Chr1	stalkie_big_nohaplotig	exon	105707286	105707293	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 1000 993 .
Chr1	stalkie_big_nohaplotig	exon	105707542	105707563	72	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 992 972 .
Chr1	stalkie_big_nohaplotig	exon	105714823	105714830	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 971 964 .
Chr1	stalkie_big_nohaplotig	exon	105715360	105715361	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 963 962 .
Chr1	stalkie_big_nohaplotig	exon	105715946	105715952	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 961 955 .
Chr1	stalkie_big_nohaplotig	exon	105720309	105720313	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 954 950 .
Chr1	stalkie_big_nohaplotig	exon	105721918	105721923	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 949 944 .
Chr1	stalkie_big_nohaplotig	exon	105731223	105731252	70	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 943 920 .
Chr1	stalkie_big_nohaplotig	exon	105738279	105738281	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 919 917 .
Chr1	stalkie_big_nohaplotig	exon	105804239	105804249	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 846 836 .
Chr1	stalkie_big_nohaplotig	exon	105806555	105806571	100	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 829 813 .
Chr1	stalkie_big_nohaplotig	exon	105806623	105806819	93	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 786 590 .
Chr1	stalkie_big_nohaplotig	exon	105813047	105813663	95	-	.	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 589 1 .
Chr1	stalkie_big_nohaplotig	CDS	105806798	105806819	.	-	1	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 611 590 .
Chr1	stalkie_big_nohaplotig	CDS	105813047	105813231	.	-	0	Parent=comp145008_c0_seq1.mrna1;Target=comp145008_c0_seq1 589 405 .
Chr1	stalkie_big_nohaplotig	mRNA	105669197	105715103	.	-	.	ID=comp163002_c3_seq1.mrna1;geneID=comp163002_c3_seq1.path1;Name=comp163002_c3_seq1;Dir=indeterminatecoverage=66.7;identity=94.7;matches=1582;mismatches=42;indels=47;unknowns=0;Target=comp163002_c3_seq1 1987 1175 .;locus=RLOC_00009930
Chr1	stalkie_big_nohaplotig	exon	105669197	105670589	99	-	.	Parent=comp163002_c3_seq1.mrna1;Target=comp163002_c3_seq1 2545 1153 .
Chr1	stalkie_big_nohaplotig	exon	105672445	105672448	100	-	.	Parent=comp163002_c3_seq1.mrna1;Target=comp163002_c3_seq1 1152 1149 .
Chr1	stalkie_big_nohaplotig	exon	105679743	105679749	100	-	.	Parent=comp163002_c3_seq1.mrna1;Target=comp163002_c3_seq1 1148 1142 .
Chr1	stalkie_big_nohaplotig	exon	105680663	105680671	100	-	.	Parent=comp163002_c3_seq1.mrna1;Target=comp163002_c3_seq1 1141 1133 .
Chr1	stalkie_big_nohaplotig	exon	105683974	105683979	100	-	.	Parent=comp163002_c3_seq1.mrna1;Target=comp163002_c3_seq1 1132 1127 .
Chr1	stalkie_big_nohaplotig	exon	105687913	105687923	100	-	.	Parent=comp163002_c3_seq1.mrna1;Target=comp163002_c3_seq1 1126 1116 .
Chr1	stalkie_big_nohaplotig	exon	105693398	105693436	30	-	.	Parent=comp163002_c3_seq1.mrna1;Target=comp163002_c3_seq1 1115 1104 .
Chr1	stalkie_big_nohaplotig	exon	105693532	105693637	57	-	.	Parent=comp163002_c3_seq1.mrna1;Target=comp163002_c3_seq1 1103 979 .
Chr1	stalkie_big_nohaplotig	exon	105697752	105697754	100	-	.	Parent=comp163002_c3_seq1.mrna1;Target=comp163002_c3_seq1 978 976 .
Chr1	stalkie_big_nohaplotig	exon	105698118	105698121	100	-	.	Parent=comp163002_c3_seq1.mrna1;Target=comp163002_c3_seq1 975 972 .
Chr1	stalkie_big_nohaplotig	exon	105699622	105699624	100	-	.	Parent=comp163002_c3_seq1.mrna1;Target=comp163002_c3_seq1 971 969 .
Chr1	stalkie_big_nohaplotig	exon	105707788	105707791	100	-	.	Parent=comp163002_c3_seq1.mrna1;Target=comp163002_c3_seq1 968 965 .
Chr1	stalkie_big_nohaplotig	exon	105707992	105707999	100	-	.	Parent=comp163002_c3_seq1.mrna1;Target=comp163002_c3_seq1 964 957 .
Chr1	stalkie_big_nohaplotig	exon	105708647	105708652	100	-	.	Parent=comp163002_c3_seq1.mrna1;Target=comp163002_c3_seq1 956 951 .
Chr1	stalkie_big_nohaplotig	exon	105710103	105710106	100	-	.	Parent=comp163002_c3_seq1.mrna1;Target=comp163002_c3_seq1 950 947 .
Chr1	stalkie_big_nohaplotig	exon	105710265	105710275	100	-	.	Parent=comp163002_c3_seq1.mrna1;Target=comp163002_c3_seq1 946 936 .
Chr1	stalkie_big_nohaplotig	exon	105710295	105710317	83	-	.	Parent=comp163002_c3_seq1.mrna1;Target=comp163002_c3_seq1 882 859 .
Chr1	stalkie_big_nohaplotig	exon	105715094	105715103	100	-	.	Parent=comp163002_c3_seq1.mrna1;Target=comp163002_c3_seq1 858 849 .
Chr1	stalkie_big_nohaplotig	CDS	105669755	105670567	.	-	0	Parent=comp163002_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	105669758	105671170	.	-	.	ID=FBgn0024364.1.mrna1;geneID=FBgn0024364.1.path1;Name=FBgn0024364.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1409;mismatches=4;indels=0;unknowns=0;Target=FBgn0024364.1 1413 1 .;locus=RLOC_00009930
Chr1	stalkie_big_nohaplotig	exon	105669758	105671170	99	-	.	Parent=FBgn0024364.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	105669758	105671170	.	-	0	Parent=FBgn0024364.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	105692291	105693026	.	-	.	ID=FBgn0024361.1.mrna1;geneID=FBgn0024361.1.path1;Name=FBgn0024361.1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=736;mismatches=0;indels=0;unknowns=0;Target=FBgn0024361.1 738 3 .;CDS_Target=FBgn0024361.1 738 4 .;locus=RLOC_00009930
Chr1	stalkie_big_nohaplotig	exon	105692291	105693026	100	-	.	Parent=FBgn0024361.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	105692291	105693025	.	-	0	Parent=FBgn0024361.1.mrna1
Chr1	gffcl	locus	105441624	105443376	.	+	.	ID=RLOC_00009931;geneIDs=FBgn0040359.1.path1;transcripts=FBgn0040359.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	105441624	105443376	.	+	.	ID=FBgn0040359.1.mrna1;geneID=FBgn0040359.1.path1;Name=FBgn0040359.1;Dir=sensecoverage=100.0;identity=100.0;matches=1701;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009931
Chr1	stalkie_big_nohaplotig	exon	105441624	105441988	100	+	.	Parent=FBgn0040359.1.mrna1;Target=FBgn0040359.1 1 365 +
Chr1	stalkie_big_nohaplotig	exon	105442041	105443376	100	+	.	Parent=FBgn0040359.1.mrna1;Target=FBgn0040359.1 366 1701 +
Chr1	stalkie_big_nohaplotig	CDS	105441624	105441988	.	+	0	Parent=FBgn0040359.1.mrna1;Target=FBgn0040359.1 1 365 +
Chr1	stalkie_big_nohaplotig	CDS	105442041	105443376	.	+	1	Parent=FBgn0040359.1.mrna1;Target=FBgn0040359.1 366 1701 +
Chr1	gffcl	locus	105604966	105906138	.	+	.	ID=RLOC_00009933;geneIDs=comp162381_c1_seq1.path1;transcripts=comp162381_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	105604966	105906138	.	+	.	ID=comp162381_c1_seq1.mrna1;geneID=comp162381_c1_seq1.path1;Name=comp162381_c1_seq1;Dir=indeterminatecoverage=38.8;identity=92.7;matches=2456;mismatches=54;indels=139;unknowns=0;Target=comp162381_c1_seq1 4217 2688 .;locus=RLOC_00009933
Chr1	stalkie_big_nohaplotig	exon	105604966	105604972	71	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1333 1327 .
Chr1	stalkie_big_nohaplotig	exon	105608803	105608805	100	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1336 1334 .
Chr1	stalkie_big_nohaplotig	exon	105624487	105624498	100	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1348 1337 .
Chr1	stalkie_big_nohaplotig	exon	105643846	105643851	83	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1420 1416 .
Chr1	stalkie_big_nohaplotig	exon	105644072	105644078	85	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1427 1421 .
Chr1	stalkie_big_nohaplotig	exon	105644196	105644201	100	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1433 1428 .
Chr1	stalkie_big_nohaplotig	exon	105644363	105644371	100	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1442 1434 .
Chr1	stalkie_big_nohaplotig	exon	105644558	105644594	40	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1460 1443 .
Chr1	stalkie_big_nohaplotig	exon	105644714	105644719	83	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1466 1461 .
Chr1	stalkie_big_nohaplotig	exon	105644879	105644882	100	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1470 1467 .
Chr1	stalkie_big_nohaplotig	exon	105645046	105645057	91	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1482 1471 .
Chr1	stalkie_big_nohaplotig	exon	105645085	105645092	100	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1550 1543 .
Chr1	stalkie_big_nohaplotig	exon	105645951	105645984	47	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1698 1640 .
Chr1	stalkie_big_nohaplotig	exon	105674121	105674129	100	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1707 1699 .
Chr1	stalkie_big_nohaplotig	exon	105675747	105675753	100	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1714 1708 .
Chr1	stalkie_big_nohaplotig	exon	105678628	105678633	100	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1720 1715 .
Chr1	stalkie_big_nohaplotig	exon	105688272	105688280	100	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1729 1721 .
Chr1	stalkie_big_nohaplotig	exon	105695934	105695939	100	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1746 1741 .
Chr1	stalkie_big_nohaplotig	exon	105702925	105702932	100	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1754 1747 .
Chr1	stalkie_big_nohaplotig	exon	105708212	105708228	26	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1828 1766 .
Chr1	stalkie_big_nohaplotig	exon	105852409	105852416	100	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1845 1838 .
Chr1	stalkie_big_nohaplotig	exon	105852506	105852558	52	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1899 1856 .
Chr1	stalkie_big_nohaplotig	exon	105859374	105859385	100	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1911 1900 .
Chr1	stalkie_big_nohaplotig	exon	105894862	105894889	65	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 1972 1946 .
Chr1	stalkie_big_nohaplotig	exon	105902901	105902952	50	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 2044 1973 .
Chr1	stalkie_big_nohaplotig	exon	105903956	105906138	99	+	.	Parent=comp162381_c1_seq1.mrna1;Target=comp162381_c1_seq1 4219 2045 .
Chr1	stalkie_big_nohaplotig	CDS	105904598	105906136	.	+	0	Parent=comp162381_c1_seq1.mrna1
Chr1	gffcl	locus	105632613	105633904	.	-	.	ID=RLOC_00009934;geneIDs=FBgn0029573.1.path1;transcripts=FBgn0029573.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	105632613	105633904	.	-	.	ID=FBgn0029573.1.mrna1;geneID=FBgn0029573.1.path1;Name=FBgn0029573.1;Dir=sensecoverage=100.0;identity=100.0;matches=501;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009934
Chr1	stalkie_big_nohaplotig	exon	105632613	105633017	100	-	.	Parent=FBgn0029573.1.mrna1;Target=FBgn0029573.1 97 501 +
Chr1	stalkie_big_nohaplotig	exon	105633809	105633904	100	-	.	Parent=FBgn0029573.1.mrna1;Target=FBgn0029573.1 1 96 +
Chr1	stalkie_big_nohaplotig	CDS	105632613	105633017	.	-	0	Parent=FBgn0029573.1.mrna1;Target=FBgn0029573.1 97 501 +
Chr1	stalkie_big_nohaplotig	CDS	105633809	105633904	.	-	0	Parent=FBgn0029573.1.mrna1;Target=FBgn0029573.1 1 96 +
Chr1	gffcl	locus	105656549	105661993	.	+	.	ID=RLOC_00009935;geneIDs=comp163757_c4_seq1.path3;transcripts=comp163757_c4_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	105656549	105661993	.	+	.	ID=comp163757_c4_seq1.mrna3;geneID=comp163757_c4_seq1.path3;Name=comp163757_c4_seq1;Dir=indeterminatecoverage=94.7;identity=97.6;matches=5031;mismatches=88;indels=34;unknowns=0;Target=comp163757_c4_seq1 4917 2380 .;locus=RLOC_00009935
Chr1	stalkie_big_nohaplotig	exon	105656549	105658583	94	+	.	Parent=comp163757_c4_seq1.mrna3;Target=comp163757_c4_seq1 2279 270 .
Chr1	stalkie_big_nohaplotig	exon	105658881	105661993	99	+	.	Parent=comp163757_c4_seq1.mrna3;Target=comp163757_c4_seq1 5393 2280 .
Chr1	stalkie_big_nohaplotig	CDS	105658981	105661518	.	+	0	Parent=comp163757_c4_seq1.mrna3
Chr1	gffcl	locus	105690643	105713939	.	+	.	ID=RLOC_00009936;geneIDs=FBgn0024360.1.path1;transcripts=FBgn0024360.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	105690643	105713939	.	+	.	ID=FBgn0024360.1.mrna1;geneID=FBgn0024360.1.path1;Name=FBgn0024360.1;Dir=sensecoverage=100.0;identity=100.0;matches=1905;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009936
Chr1	stalkie_big_nohaplotig	exon	105690643	105690796	100	+	.	Parent=FBgn0024360.1.mrna1;Target=FBgn0024360.1 1 154 +
Chr1	stalkie_big_nohaplotig	exon	105690848	105691697	100	+	.	Parent=FBgn0024360.1.mrna1;Target=FBgn0024360.1 155 1004 +
Chr1	stalkie_big_nohaplotig	exon	105712973	105713432	100	+	.	Parent=FBgn0024360.1.mrna1;Target=FBgn0024360.1 1005 1464 +
Chr1	stalkie_big_nohaplotig	exon	105713499	105713939	100	+	.	Parent=FBgn0024360.1.mrna1;Target=FBgn0024360.1 1465 1905 +
Chr1	stalkie_big_nohaplotig	CDS	105690643	105690796	.	+	0	Parent=FBgn0024360.1.mrna1;Target=FBgn0024360.1 1 154 +
Chr1	stalkie_big_nohaplotig	CDS	105690848	105691697	.	+	2	Parent=FBgn0024360.1.mrna1;Target=FBgn0024360.1 155 1004 +
Chr1	stalkie_big_nohaplotig	CDS	105712973	105713432	.	+	1	Parent=FBgn0024360.1.mrna1;Target=FBgn0024360.1 1005 1464 +
Chr1	stalkie_big_nohaplotig	CDS	105713499	105713939	.	+	0	Parent=FBgn0024360.1.mrna1;Target=FBgn0024360.1 1465 1905 +
Chr1	gffcl	locus	105698144	105698222	.	+	.	ID=RLOC_00009937;geneIDs=comp162210_c0_seq1.path2;transcripts=comp162210_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	105698144	105698222	.	+	.	ID=comp162210_c0_seq1.mrna2;geneID=comp162210_c0_seq1.path2;Name=comp162210_c0_seq1;Dir=indeterminatecoverage=4.5;identity=100.0;matches=79;mismatches=0;indels=0;unknowns=0;Target=comp162210_c0_seq1 1751 1673 .;CDS_Target=comp162210_c0_seq1 1750 1673 .;locus=RLOC_00009937
Chr1	stalkie_big_nohaplotig	exon	105698144	105698222	100	+	.	Parent=comp162210_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	105698144	105698221	.	+	0	Parent=comp162210_c0_seq1.mrna2
Chr1	gffcl	locus	105788577	105789967	.	+	.	ID=RLOC_00009938;geneIDs=FBgn0024362.1.path1;transcripts=FBgn0024362.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	105788577	105789967	.	+	.	ID=FBgn0024362.1.mrna1;geneID=FBgn0024362.1.path1;Name=FBgn0024362.1;Dir=sensecoverage=100.0;identity=100.0;matches=1185;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009938
Chr1	stalkie_big_nohaplotig	exon	105788577	105789353	100	+	.	Parent=FBgn0024362.1.mrna1;Target=FBgn0024362.1 1 777 +
Chr1	stalkie_big_nohaplotig	exon	105789504	105789749	100	+	.	Parent=FBgn0024362.1.mrna1;Target=FBgn0024362.1 778 1023 +
Chr1	stalkie_big_nohaplotig	exon	105789806	105789967	100	+	.	Parent=FBgn0024362.1.mrna1;Target=FBgn0024362.1 1024 1185 +
Chr1	stalkie_big_nohaplotig	CDS	105788577	105789353	.	+	0	Parent=FBgn0024362.1.mrna1;Target=FBgn0024362.1 1 777 +
Chr1	stalkie_big_nohaplotig	CDS	105789504	105789749	.	+	0	Parent=FBgn0024362.1.mrna1;Target=FBgn0024362.1 778 1023 +
Chr1	stalkie_big_nohaplotig	CDS	105789806	105789967	.	+	0	Parent=FBgn0024362.1.mrna1;Target=FBgn0024362.1 1024 1185 +
Chr1	gffcl	locus	105791474	105792693	.	-	.	ID=RLOC_00009939;geneIDs=Dv_FBgn0209645.2.path5,comp163741_c0_seq1.path4;transcripts=comp163741_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	105791474	105792693	.	-	.	ID=comp163741_c0_seq1.mrna4;geneID=comp163741_c0_seq1.path4;Name=comp163741_c0_seq1;Dir=sensecoverage=100.0;identity=97.7;matches=1138;mismatches=27;indels=0;unknowns=0;Target=comp163741_c0_seq1 38 220 +;locus=RLOC_00009939
Chr1	stalkie_big_nohaplotig	exon	105791474	105792608	97	-	.	Parent=comp163741_c0_seq1.mrna4;Target=comp163741_c0_seq1 31 1165 +
Chr1	stalkie_big_nohaplotig	exon	105792664	105792693	100	-	.	Parent=comp163741_c0_seq1.mrna4;Target=comp163741_c0_seq1 1 30 +
Chr1	stalkie_big_nohaplotig	CDS	105792419	105792601	.	-	0	Parent=comp163741_c0_seq1.mrna4
Chr1	gffcl	locus	105793727	105867097	.	-	.	ID=RLOC_00009940;geneIDs=comp86741_c0_seq1.path1,comp163441_c0_seq1.path1;transcripts=comp163441_c0_seq1.mrna1,comp86741_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	105793727	105867097	.	-	.	ID=comp163441_c0_seq1.mrna1;geneID=comp163441_c0_seq1.path1;Name=comp163441_c0_seq1;Dir=indeterminatecoverage=79.6;identity=96.1;matches=2172;mismatches=54;indels=34;unknowns=0;Target=comp163441_c0_seq1 1406 1218 .;locus=RLOC_00009940
Chr1	stalkie_big_nohaplotig	exon	105793727	105794653	98	-	.	Parent=comp163441_c0_seq1.mrna1;Target=comp163441_c0_seq1 3158 2228 .
Chr1	stalkie_big_nohaplotig	exon	105794697	105795879	95	-	.	Parent=comp163441_c0_seq1.mrna1;Target=comp163441_c0_seq1 1983 787 .
Chr1	stalkie_big_nohaplotig	exon	105797229	105797238	100	-	.	Parent=comp163441_c0_seq1.mrna1;Target=comp163441_c0_seq1 777 768 .
Chr1	stalkie_big_nohaplotig	exon	105797847	105797860	71	-	.	Parent=comp163441_c0_seq1.mrna1;Target=comp163441_c0_seq1 767 754 .
Chr1	stalkie_big_nohaplotig	exon	105804057	105804062	100	-	.	Parent=comp163441_c0_seq1.mrna1;Target=comp163441_c0_seq1 753 748 .
Chr1	stalkie_big_nohaplotig	exon	105810318	105810324	71	-	.	Parent=comp163441_c0_seq1.mrna1;Target=comp163441_c0_seq1 747 741 .
Chr1	stalkie_big_nohaplotig	exon	105814638	105814641	100	-	.	Parent=comp163441_c0_seq1.mrna1;Target=comp163441_c0_seq1 740 737 .
Chr1	stalkie_big_nohaplotig	exon	105817602	105817603	100	-	.	Parent=comp163441_c0_seq1.mrna1;Target=comp163441_c0_seq1 736 735 .
Chr1	stalkie_big_nohaplotig	exon	105824884	105824891	100	-	.	Parent=comp163441_c0_seq1.mrna1;Target=comp163441_c0_seq1 734 727 .
Chr1	stalkie_big_nohaplotig	exon	105827718	105827723	100	-	.	Parent=comp163441_c0_seq1.mrna1;Target=comp163441_c0_seq1 726 721 .
Chr1	stalkie_big_nohaplotig	exon	105833431	105833444	78	-	.	Parent=comp163441_c0_seq1.mrna1;Target=comp163441_c0_seq1 720 707 .
Chr1	stalkie_big_nohaplotig	exon	105840908	105840913	100	-	.	Parent=comp163441_c0_seq1.mrna1;Target=comp163441_c0_seq1 706 701 .
Chr1	stalkie_big_nohaplotig	exon	105843370	105843376	100	-	.	Parent=comp163441_c0_seq1.mrna1;Target=comp163441_c0_seq1 700 694 .
Chr1	stalkie_big_nohaplotig	exon	105860051	105860077	67	-	.	Parent=comp163441_c0_seq1.mrna1;Target=comp163441_c0_seq1 693 663 .
Chr1	stalkie_big_nohaplotig	exon	105866039	105866047	100	-	.	Parent=comp163441_c0_seq1.mrna1;Target=comp163441_c0_seq1 655 647 .
Chr1	stalkie_big_nohaplotig	exon	105867096	105867097	100	-	.	Parent=comp163441_c0_seq1.mrna1;Target=comp163441_c0_seq1 646 645 .
Chr1	stalkie_big_nohaplotig	CDS	105795269	105795444	.	-	0	Parent=comp163441_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	105840800	105841194	.	-	.	ID=comp86741_c0_seq1.mrna1;geneID=comp86741_c0_seq1.path1;Name=comp86741_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.5;matches=393;mismatches=2;indels=0;unknowns=0;Target=comp86741_c0_seq1 395 1 .;CDS_Target=comp86741_c0_seq1 265 119 .;locus=RLOC_00009940
Chr1	stalkie_big_nohaplotig	exon	105840800	105841194	99	-	.	Parent=comp86741_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	105840930	105841076	.	-	0	Parent=comp86741_c0_seq1.mrna1
Chr1	gffcl	locus	105800190	105802481	.	-	.	ID=RLOC_00009942;geneIDs=comp156443_c0_seq1.path2;transcripts=comp156443_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	105800190	105802481	.	-	.	ID=comp156443_c0_seq1.mrna2;geneID=comp156443_c0_seq1.path2;Name=comp156443_c0_seq1;Dir=sensecoverage=87.0;identity=95.9;matches=1373;mismatches=23;indels=36;unknowns=0;Target=comp156443_c0_seq1 742 798 +;locus=RLOC_00009942
Chr1	stalkie_big_nohaplotig	exon	105800190	105801557	96	-	.	Parent=comp156443_c0_seq1.mrna2;Target=comp156443_c0_seq1 243 1645 +
Chr1	stalkie_big_nohaplotig	exon	105802453	105802481	89	-	.	Parent=comp156443_c0_seq1.mrna2;Target=comp156443_c0_seq1 215 242 +
Chr1	stalkie_big_nohaplotig	CDS	105801037	105801059	.	-	2	Parent=comp156443_c0_seq1.mrna2
Chr1	gffcl	locus	105922095	105922682	.	+	.	ID=RLOC_00009944;geneIDs=comp161354_c0_seq1.path1;transcripts=comp161354_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	105922095	105922682	.	+	.	ID=comp161354_c0_seq1.mrna1;geneID=comp161354_c0_seq1.path1;Name=comp161354_c0_seq1;Dir=antisensecoverage=100.0;identity=98.1;matches=361;mismatches=7;indels=0;unknowns=0;locus=RLOC_00009944
Chr1	stalkie_big_nohaplotig	exon	105922095	105922160	93	+	.	Parent=comp161354_c0_seq1.mrna1;Target=comp161354_c0_seq1 303 368 -
Chr1	stalkie_big_nohaplotig	exon	105922219	105922404	98	+	.	Parent=comp161354_c0_seq1.mrna1;Target=comp161354_c0_seq1 117 302 -
Chr1	stalkie_big_nohaplotig	exon	105922467	105922536	100	+	.	Parent=comp161354_c0_seq1.mrna1;Target=comp161354_c0_seq1 47 116 -
Chr1	stalkie_big_nohaplotig	exon	105922637	105922682	100	+	.	Parent=comp161354_c0_seq1.mrna1;Target=comp161354_c0_seq1 1 46 -
Chr1	stalkie_big_nohaplotig	CDS	105922097	105922160	.	+	0	Parent=comp161354_c0_seq1.mrna1;Target=comp161354_c0_seq1 303 366 .
Chr1	stalkie_big_nohaplotig	CDS	105922219	105922404	.	+	2	Parent=comp161354_c0_seq1.mrna1;Target=comp161354_c0_seq1 117 302 .
Chr1	stalkie_big_nohaplotig	CDS	105922467	105922536	.	+	2	Parent=comp161354_c0_seq1.mrna1;Target=comp161354_c0_seq1 47 116 .
Chr1	stalkie_big_nohaplotig	CDS	105922637	105922682	.	+	1	Parent=comp161354_c0_seq1.mrna1;Target=comp161354_c0_seq1 1 46 .
Chr1	gffcl	locus	105952391	105953579	.	+	.	ID=RLOC_00009945;geneIDs=comp146472_c1_seq1.path1;transcripts=comp146472_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	105952391	105953579	.	+	.	ID=comp146472_c1_seq1.mrna1;geneID=comp146472_c1_seq1.path1;Name=comp146472_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1188;mismatches=1;indels=5;unknowns=0;Target=comp146472_c1_seq1 1194 1 .;CDS_Target=comp146472_c1_seq1 1136 984 .;locus=RLOC_00009945
Chr1	stalkie_big_nohaplotig	exon	105952391	105953579	99	+	.	Parent=comp146472_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	105953369	105953521	.	+	0	Parent=comp146472_c1_seq1.mrna1
Chr1	gffcl	locus	105954611	105956207	.	-	.	ID=RLOC_00009946;geneIDs=comp162625_c4_seq1.path2;transcripts=comp162625_c4_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	105954611	105956207	.	-	.	ID=comp162625_c4_seq1.mrna2;geneID=comp162625_c4_seq1.path2;Name=comp162625_c4_seq1;Dir=indeterminatecoverage=94.3;identity=95.9;matches=1430;mismatches=44;indels=17;unknowns=0;Target=comp162625_c4_seq1 176 138 .;locus=RLOC_00009946
Chr1	stalkie_big_nohaplotig	exon	105954611	105955979	97	-	.	Parent=comp162625_c4_seq1.mrna2;Target=comp162625_c4_seq1 1605 232 .
Chr1	stalkie_big_nohaplotig	exon	105956092	105956207	81	-	.	Parent=comp162625_c4_seq1.mrna2;Target=comp162625_c4_seq1 197 92 .
Chr1	stalkie_big_nohaplotig	CDS	105956113	105956161	.	-	0	Parent=comp162625_c4_seq1.mrna2
Chr1	gffcl	locus	106027702	106028700	.	+	.	ID=RLOC_00009947;geneIDs=comp151273_c0_seq1.path1;transcripts=comp151273_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106027702	106028700	.	+	.	ID=comp151273_c0_seq1.mrna1;geneID=comp151273_c0_seq1.path1;Name=comp151273_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.7;matches=996;mismatches=1;indels=2;unknowns=0;Target=comp151273_c0_seq1 997 1 .;CDS_Target=comp151273_c0_seq1 464 282 .;locus=RLOC_00009947
Chr1	stalkie_big_nohaplotig	exon	106027702	106028700	99	+	.	Parent=comp151273_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	106027985	106028167	.	+	0	Parent=comp151273_c0_seq1.mrna1
Chr1	gffcl	locus	106043146	106043711	.	+	.	ID=RLOC_00009948;geneIDs=comp767098_c0_seq1.path1;transcripts=comp767098_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106043146	106043711	.	+	.	ID=comp767098_c0_seq1.mrna1;geneID=comp767098_c0_seq1.path1;Name=comp767098_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=424;mismatches=1;indels=0;unknowns=0;Target=comp767098_c0_seq1 217 423 +;locus=RLOC_00009948
Chr1	stalkie_big_nohaplotig	exon	106043146	106043169	100	+	.	Parent=comp767098_c0_seq1.mrna1;Target=comp767098_c0_seq1 1 24 +
Chr1	stalkie_big_nohaplotig	exon	106043311	106043711	99	+	.	Parent=comp767098_c0_seq1.mrna1;Target=comp767098_c0_seq1 25 425 +
Chr1	stalkie_big_nohaplotig	CDS	106043503	106043709	.	+	0	Parent=comp767098_c0_seq1.mrna1
Chr1	gffcl	locus	106050450	106051104	.	-	.	ID=RLOC_00009949;geneIDs=comp75591_c0_seq1.path1;transcripts=comp75591_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106050450	106051104	.	-	.	ID=comp75591_c0_seq1.mrna1;geneID=comp75591_c0_seq1.path1;Name=comp75591_c0_seq1;Dir=sensecoverage=100.0;identity=94.7;matches=467;mismatches=4;indels=22;unknowns=0;Target=comp75591_c0_seq1 188 301 +;locus=RLOC_00009949
Chr1	stalkie_big_nohaplotig	exon	106050450	106050918	94	-	.	Parent=comp75591_c0_seq1.mrna1;Target=comp75591_c0_seq1 25 471 +
Chr1	stalkie_big_nohaplotig	exon	106051081	106051104	100	-	.	Parent=comp75591_c0_seq1.mrna1;Target=comp75591_c0_seq1 1 24 +
Chr1	stalkie_big_nohaplotig	CDS	106050642	106050755	.	-	0	Parent=comp75591_c0_seq1.mrna1
Chr1	gffcl	locus	106051618	106060785	.	-	.	ID=RLOC_00009950;geneIDs=FBgn0030251.1.path1;transcripts=FBgn0030251.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106051618	106060785	.	-	.	ID=FBgn0030251.1.mrna1;geneID=FBgn0030251.1.path1;Name=FBgn0030251.1;Dir=sensecoverage=100.0;identity=99.5;matches=1929;mismatches=9;indels=0;unknowns=0;locus=RLOC_00009950
Chr1	stalkie_big_nohaplotig	exon	106051618	106051848	98	-	.	Parent=FBgn0030251.1.mrna1;Target=FBgn0030251.1 1708 1938 +
Chr1	stalkie_big_nohaplotig	exon	106051910	106052142	100	-	.	Parent=FBgn0030251.1.mrna1;Target=FBgn0030251.1 1475 1707 +
Chr1	stalkie_big_nohaplotig	exon	106052206	106052402	100	-	.	Parent=FBgn0030251.1.mrna1;Target=FBgn0030251.1 1278 1474 +
Chr1	stalkie_big_nohaplotig	exon	106052466	106053591	99	-	.	Parent=FBgn0030251.1.mrna1;Target=FBgn0030251.1 152 1277 +
Chr1	stalkie_big_nohaplotig	exon	106060635	106060785	99	-	.	Parent=FBgn0030251.1.mrna1;Target=FBgn0030251.1 1 151 +
Chr1	stalkie_big_nohaplotig	CDS	106051618	106051848	.	-	0	Parent=FBgn0030251.1.mrna1;Target=FBgn0030251.1 1708 1938 +
Chr1	stalkie_big_nohaplotig	CDS	106051910	106052142	.	-	2	Parent=FBgn0030251.1.mrna1;Target=FBgn0030251.1 1475 1707 +
Chr1	stalkie_big_nohaplotig	CDS	106052206	106052402	.	-	1	Parent=FBgn0030251.1.mrna1;Target=FBgn0030251.1 1278 1474 +
Chr1	stalkie_big_nohaplotig	CDS	106052466	106053591	.	-	2	Parent=FBgn0030251.1.mrna1;Target=FBgn0030251.1 152 1277 +
Chr1	stalkie_big_nohaplotig	CDS	106060635	106060785	.	-	0	Parent=FBgn0030251.1.mrna1;Target=FBgn0030251.1 1 151 +
Chr1	gffcl	locus	106066230	106067691	.	-	.	ID=RLOC_00009951;geneIDs=comp147247_c0_seq1.path1;transcripts=comp147247_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106066230	106067691	.	-	.	ID=comp147247_c0_seq1.mrna1;geneID=comp147247_c0_seq1.path1;Name=comp147247_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.8;matches=1459;mismatches=3;indels=0;unknowns=0;Target=comp147247_c0_seq1 1462 1 .;CDS_Target=comp147247_c0_seq1 1161 976 .;locus=RLOC_00009951
Chr1	stalkie_big_nohaplotig	exon	106066230	106067691	99	-	.	Parent=comp147247_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	106066531	106066716	.	-	0	Parent=comp147247_c0_seq1.mrna1
Chr1	gffcl	locus	106070598	106071957	.	-	.	ID=RLOC_00009952;geneIDs=comp156885_c0_seq1.path1;transcripts=comp156885_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106070598	106071957	.	-	.	ID=comp156885_c0_seq1.mrna1;geneID=comp156885_c0_seq1.path1;Name=comp156885_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.5;matches=1343;mismatches=14;indels=7;unknowns=0;Target=comp156885_c0_seq1 1366 6 .;CDS_Target=comp156885_c0_seq1 1051 731 .;locus=RLOC_00009952
Chr1	stalkie_big_nohaplotig	exon	106070598	106071957	98	-	.	Parent=comp156885_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	106070916	106071236	.	-	0	Parent=comp156885_c0_seq1.mrna1
Chr1	gffcl	locus	106074545	106105820	.	-	.	ID=RLOC_00009953;geneIDs=FBgn0259171.1.path1;transcripts=FBgn0259171.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106074545	106105820	.	-	.	ID=FBgn0259171.1.mrna1;geneID=FBgn0259171.1.path1;Name=FBgn0259171.1;Dir=sensecoverage=63.2;identity=99.9;matches=2622;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009953
Chr1	stalkie_big_nohaplotig	exon	106074545	106075810	99	-	.	Parent=FBgn0259171.1.mrna1;Target=FBgn0259171.1 2890 4155 +
Chr1	stalkie_big_nohaplotig	exon	106081339	106081687	100	-	.	Parent=FBgn0259171.1.mrna1;Target=FBgn0259171.1 2541 2889 +
Chr1	stalkie_big_nohaplotig	exon	106081740	106082035	100	-	.	Parent=FBgn0259171.1.mrna1;Target=FBgn0259171.1 2245 2540 +
Chr1	stalkie_big_nohaplotig	exon	106082092	106082218	100	-	.	Parent=FBgn0259171.1.mrna1;Target=FBgn0259171.1 2118 2244 +
Chr1	stalkie_big_nohaplotig	exon	106095576	106095683	100	-	.	Parent=FBgn0259171.1.mrna1;Target=FBgn0259171.1 2010 2117 +
Chr1	stalkie_big_nohaplotig	exon	106095839	106095990	100	-	.	Parent=FBgn0259171.1.mrna1;Target=FBgn0259171.1 1858 2009 +
Chr1	stalkie_big_nohaplotig	exon	106105495	106105820	99	-	.	Parent=FBgn0259171.1.mrna1;Target=FBgn0259171.1 1532 1857 +
Chr1	stalkie_big_nohaplotig	CDS	106074545	106075810	.	-	0	Parent=FBgn0259171.1.mrna1;Target=FBgn0259171.1 2890 4155 +
Chr1	stalkie_big_nohaplotig	CDS	106081339	106081687	.	-	1	Parent=FBgn0259171.1.mrna1;Target=FBgn0259171.1 2541 2889 +
Chr1	stalkie_big_nohaplotig	CDS	106081740	106082035	.	-	0	Parent=FBgn0259171.1.mrna1;Target=FBgn0259171.1 2245 2540 +
Chr1	stalkie_big_nohaplotig	CDS	106082092	106082218	.	-	1	Parent=FBgn0259171.1.mrna1;Target=FBgn0259171.1 2118 2244 +
Chr1	stalkie_big_nohaplotig	CDS	106095576	106095683	.	-	1	Parent=FBgn0259171.1.mrna1;Target=FBgn0259171.1 2010 2117 +
Chr1	stalkie_big_nohaplotig	CDS	106095839	106095990	.	-	0	Parent=FBgn0259171.1.mrna1;Target=FBgn0259171.1 1858 2009 +
Chr1	stalkie_big_nohaplotig	CDS	106105495	106105818	.	-	0	Parent=FBgn0259171.1.mrna1;Target=FBgn0259171.1 1534 1857 +
Chr1	gffcl	locus	106090799	106092687	.	+	.	ID=RLOC_00009954;geneIDs=FBgn0030425.1.path1;transcripts=FBgn0030425.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106090799	106092687	.	+	.	ID=FBgn0030425.1.mrna1;geneID=FBgn0030425.1.path1;Name=FBgn0030425.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1875;mismatches=14;indels=1;unknowns=0;Target=FBgn0030425.1 1890 1 .;locus=RLOC_00009954
Chr1	stalkie_big_nohaplotig	exon	106090799	106092687	99	+	.	Parent=FBgn0030425.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	106090799	106092687	.	+	0	Parent=FBgn0030425.1.mrna1
Chr1	gffcl	locus	106154671	106155884	.	+	.	ID=RLOC_00009955;geneIDs=comp154512_c0_seq1.path1;transcripts=comp154512_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106154671	106155884	.	+	.	ID=comp154512_c0_seq1.mrna1;geneID=comp154512_c0_seq1.path1;Name=comp154512_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.4;matches=1214;mismatches=0;indels=7;unknowns=0;Target=comp154512_c0_seq1 1226 6 .;CDS_Target=comp154512_c0_seq1 749 573 .;locus=RLOC_00009955
Chr1	stalkie_big_nohaplotig	exon	106154671	106155884	99	+	.	Parent=comp154512_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	106155231	106155407	.	+	0	Parent=comp154512_c0_seq1.mrna1
Chr1	gffcl	locus	106170914	106172403	.	-	.	ID=RLOC_00009956;geneIDs=FBgn0023520.1.path1;transcripts=FBgn0023520.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106170914	106172403	.	-	.	ID=FBgn0023520.1.mrna1;geneID=FBgn0023520.1.path1;Name=FBgn0023520.1;Dir=sensecoverage=100.0;identity=99.5;matches=1310;mismatches=7;indels=0;unknowns=0;locus=RLOC_00009956
Chr1	stalkie_big_nohaplotig	exon	106170914	106171194	98	-	.	Parent=FBgn0023520.1.mrna1;Target=FBgn0023520.1 1037 1317 +
Chr1	stalkie_big_nohaplotig	exon	106171250	106171859	99	-	.	Parent=FBgn0023520.1.mrna1;Target=FBgn0023520.1 427 1036 +
Chr1	stalkie_big_nohaplotig	exon	106171921	106172292	99	-	.	Parent=FBgn0023520.1.mrna1;Target=FBgn0023520.1 55 426 +
Chr1	stalkie_big_nohaplotig	exon	106172350	106172403	98	-	.	Parent=FBgn0023520.1.mrna1;Target=FBgn0023520.1 1 54 +
Chr1	stalkie_big_nohaplotig	CDS	106170914	106171194	.	-	2	Parent=FBgn0023520.1.mrna1;Target=FBgn0023520.1 1037 1317 +
Chr1	stalkie_big_nohaplotig	CDS	106171250	106171859	.	-	0	Parent=FBgn0023520.1.mrna1;Target=FBgn0023520.1 427 1036 +
Chr1	stalkie_big_nohaplotig	CDS	106171921	106172292	.	-	0	Parent=FBgn0023520.1.mrna1;Target=FBgn0023520.1 55 426 +
Chr1	stalkie_big_nohaplotig	CDS	106172350	106172403	.	-	0	Parent=FBgn0023520.1.mrna1;Target=FBgn0023520.1 1 54 +
Chr1	gffcl	locus	106179513	106180559	.	-	.	ID=RLOC_00009957;geneIDs=FBgn0030460.1.path1;transcripts=FBgn0030460.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106179513	106180559	.	-	.	ID=FBgn0030460.1.mrna1;geneID=FBgn0030460.1.path1;Name=FBgn0030460.1;Dir=sensecoverage=100.0;identity=100.0;matches=945;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009957
Chr1	stalkie_big_nohaplotig	exon	106179513	106179812	100	-	.	Parent=FBgn0030460.1.mrna1;Target=FBgn0030460.1 646 945 +
Chr1	stalkie_big_nohaplotig	exon	106179864	106180282	100	-	.	Parent=FBgn0030460.1.mrna1;Target=FBgn0030460.1 227 645 +
Chr1	stalkie_big_nohaplotig	exon	106180334	106180559	100	-	.	Parent=FBgn0030460.1.mrna1;Target=FBgn0030460.1 1 226 +
Chr1	stalkie_big_nohaplotig	CDS	106179513	106179812	.	-	0	Parent=FBgn0030460.1.mrna1;Target=FBgn0030460.1 646 945 +
Chr1	stalkie_big_nohaplotig	CDS	106179864	106180282	.	-	2	Parent=FBgn0030460.1.mrna1;Target=FBgn0030460.1 227 645 +
Chr1	stalkie_big_nohaplotig	CDS	106180334	106180559	.	-	0	Parent=FBgn0030460.1.mrna1;Target=FBgn0030460.1 1 226 +
Chr1	gffcl	locus	106182495	106184414	.	+	.	ID=RLOC_00009958;geneIDs=FBgn0038301.1.path1;transcripts=FBgn0038301.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106182495	106184414	.	+	.	ID=FBgn0038301.1.mrna1;geneID=FBgn0038301.1.path1;Name=FBgn0038301.1;Dir=sensecoverage=100.0;identity=99.9;matches=1693;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009958
Chr1	stalkie_big_nohaplotig	exon	106182495	106182982	100	+	.	Parent=FBgn0038301.1.mrna1;Target=FBgn0038301.1 1 488 +
Chr1	stalkie_big_nohaplotig	exon	106183038	106183145	100	+	.	Parent=FBgn0038301.1.mrna1;Target=FBgn0038301.1 489 596 +
Chr1	stalkie_big_nohaplotig	exon	106183202	106183716	99	+	.	Parent=FBgn0038301.1.mrna1;Target=FBgn0038301.1 597 1111 +
Chr1	stalkie_big_nohaplotig	exon	106183775	106184111	100	+	.	Parent=FBgn0038301.1.mrna1;Target=FBgn0038301.1 1112 1448 +
Chr1	stalkie_big_nohaplotig	exon	106184168	106184414	100	+	.	Parent=FBgn0038301.1.mrna1;Target=FBgn0038301.1 1449 1695 +
Chr1	stalkie_big_nohaplotig	CDS	106182495	106182982	.	+	0	Parent=FBgn0038301.1.mrna1;Target=FBgn0038301.1 1 488 +
Chr1	stalkie_big_nohaplotig	CDS	106183038	106183145	.	+	1	Parent=FBgn0038301.1.mrna1;Target=FBgn0038301.1 489 596 +
Chr1	stalkie_big_nohaplotig	CDS	106183202	106183716	.	+	1	Parent=FBgn0038301.1.mrna1;Target=FBgn0038301.1 597 1111 +
Chr1	stalkie_big_nohaplotig	CDS	106183775	106184111	.	+	2	Parent=FBgn0038301.1.mrna1;Target=FBgn0038301.1 1112 1448 +
Chr1	stalkie_big_nohaplotig	CDS	106184168	106184414	.	+	1	Parent=FBgn0038301.1.mrna1;Target=FBgn0038301.1 1449 1695 +
Chr1	gffcl	locus	106203948	106204986	.	+	.	ID=RLOC_00009959;geneIDs=FBgn0023521.1.path1;transcripts=FBgn0023521.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106203948	106204986	.	+	.	ID=FBgn0023521.1.mrna1;geneID=FBgn0023521.1.path1;Name=FBgn0023521.1;Dir=sensecoverage=100.0;identity=100.0;matches=921;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009959
Chr1	stalkie_big_nohaplotig	exon	106203948	106204251	100	+	.	Parent=FBgn0023521.1.mrna1;Target=FBgn0023521.1 1 304 +
Chr1	stalkie_big_nohaplotig	exon	106204314	106204648	100	+	.	Parent=FBgn0023521.1.mrna1;Target=FBgn0023521.1 305 639 +
Chr1	stalkie_big_nohaplotig	exon	106204705	106204986	100	+	.	Parent=FBgn0023521.1.mrna1;Target=FBgn0023521.1 640 921 +
Chr1	stalkie_big_nohaplotig	CDS	106203948	106204251	.	+	0	Parent=FBgn0023521.1.mrna1;Target=FBgn0023521.1 1 304 +
Chr1	stalkie_big_nohaplotig	CDS	106204314	106204648	.	+	2	Parent=FBgn0023521.1.mrna1;Target=FBgn0023521.1 305 639 +
Chr1	stalkie_big_nohaplotig	CDS	106204705	106204986	.	+	0	Parent=FBgn0023521.1.mrna1;Target=FBgn0023521.1 640 921 +
Chr1	gffcl	locus	106205230	106207283	.	-	.	ID=RLOC_00009960;geneIDs=FBgn0023522.1.path1;transcripts=FBgn0023522.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106205230	106207283	.	-	.	ID=FBgn0023522.1.mrna1;geneID=FBgn0023522.1.path1;Name=FBgn0023522.1;Dir=sensecoverage=100.0;identity=99.9;matches=1310;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009960
Chr1	stalkie_big_nohaplotig	exon	106205230	106205590	100	-	.	Parent=FBgn0023522.1.mrna1;Target=FBgn0023522.1 951 1311 +
Chr1	stalkie_big_nohaplotig	exon	106205646	106205740	100	-	.	Parent=FBgn0023522.1.mrna1;Target=FBgn0023522.1 856 950 +
Chr1	stalkie_big_nohaplotig	exon	106205792	106205954	99	-	.	Parent=FBgn0023522.1.mrna1;Target=FBgn0023522.1 693 855 +
Chr1	stalkie_big_nohaplotig	exon	106206003	106206143	100	-	.	Parent=FBgn0023522.1.mrna1;Target=FBgn0023522.1 552 692 +
Chr1	stalkie_big_nohaplotig	exon	106206201	106206361	100	-	.	Parent=FBgn0023522.1.mrna1;Target=FBgn0023522.1 391 551 +
Chr1	stalkie_big_nohaplotig	exon	106206533	106206782	100	-	.	Parent=FBgn0023522.1.mrna1;Target=FBgn0023522.1 141 390 +
Chr1	stalkie_big_nohaplotig	exon	106207144	106207283	100	-	.	Parent=FBgn0023522.1.mrna1;Target=FBgn0023522.1 1 140 +
Chr1	stalkie_big_nohaplotig	CDS	106205230	106205590	.	-	1	Parent=FBgn0023522.1.mrna1;Target=FBgn0023522.1 951 1311 +
Chr1	stalkie_big_nohaplotig	CDS	106205646	106205740	.	-	0	Parent=FBgn0023522.1.mrna1;Target=FBgn0023522.1 856 950 +
Chr1	stalkie_big_nohaplotig	CDS	106205792	106205954	.	-	1	Parent=FBgn0023522.1.mrna1;Target=FBgn0023522.1 693 855 +
Chr1	stalkie_big_nohaplotig	CDS	106206003	106206143	.	-	1	Parent=FBgn0023522.1.mrna1;Target=FBgn0023522.1 552 692 +
Chr1	stalkie_big_nohaplotig	CDS	106206201	106206361	.	-	0	Parent=FBgn0023522.1.mrna1;Target=FBgn0023522.1 391 551 +
Chr1	stalkie_big_nohaplotig	CDS	106206533	106206782	.	-	1	Parent=FBgn0023522.1.mrna1;Target=FBgn0023522.1 141 390 +
Chr1	stalkie_big_nohaplotig	CDS	106207144	106207283	.	-	0	Parent=FBgn0023522.1.mrna1;Target=FBgn0023522.1 1 140 +
Chr1	gffcl	locus	106209019	106209373	.	-	.	ID=RLOC_00009961;geneIDs=comp151573_c1_seq1.path9;transcripts=comp151573_c1_seq1.mrna9
Chr1	stalkie_big_nohaplotig	mRNA	106209019	106209373	.	-	.	ID=comp151573_c1_seq1.mrna9;geneID=comp151573_c1_seq1.path9;Name=comp151573_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=354;mismatches=1;indels=7;unknowns=0;Target=comp151573_c1_seq1 362 1 .;CDS_Target=comp151573_c1_seq1 120 1 .;locus=RLOC_00009961
Chr1	stalkie_big_nohaplotig	exon	106209019	106209373	97	-	.	Parent=comp151573_c1_seq1.mrna9
Chr1	stalkie_big_nohaplotig	CDS	106209254	106209373	.	-	0	Parent=comp151573_c1_seq1.mrna9
Chr1	gffcl	locus	106231009	106341408	.	+	.	ID=RLOC_00009962;geneIDs=comp160974_c0_seq1.path1;transcripts=comp160974_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106231009	106341408	.	+	.	ID=comp160974_c0_seq1.mrna1;geneID=comp160974_c0_seq1.path1;Name=comp160974_c0_seq1;Dir=indeterminatecoverage=17.3;identity=91.8;matches=348;mismatches=27;indels=4;unknowns=0;locus=RLOC_00009962
Chr1	stalkie_big_nohaplotig	exon	106231009	106231018	100	+	.	Parent=comp160974_c0_seq1.mrna1;Target=comp160974_c0_seq1 1708 1699 .
Chr1	stalkie_big_nohaplotig	exon	106231925	106231930	100	+	.	Parent=comp160974_c0_seq1.mrna1;Target=comp160974_c0_seq1 1714 1709 .
Chr1	stalkie_big_nohaplotig	exon	106244178	106244187	100	+	.	Parent=comp160974_c0_seq1.mrna1;Target=comp160974_c0_seq1 1724 1715 .
Chr1	stalkie_big_nohaplotig	exon	106252269	106252272	100	+	.	Parent=comp160974_c0_seq1.mrna1;Target=comp160974_c0_seq1 1728 1725 .
Chr1	stalkie_big_nohaplotig	exon	106257676	106257679	100	+	.	Parent=comp160974_c0_seq1.mrna1;Target=comp160974_c0_seq1 1732 1729 .
Chr1	stalkie_big_nohaplotig	exon	106271744	106271747	100	+	.	Parent=comp160974_c0_seq1.mrna1;Target=comp160974_c0_seq1 1736 1733 .
Chr1	stalkie_big_nohaplotig	exon	106287598	106287604	100	+	.	Parent=comp160974_c0_seq1.mrna1;Target=comp160974_c0_seq1 1743 1737 .
Chr1	stalkie_big_nohaplotig	exon	106302214	106302219	100	+	.	Parent=comp160974_c0_seq1.mrna1;Target=comp160974_c0_seq1 1749 1744 .
Chr1	stalkie_big_nohaplotig	exon	106307133	106307142	90	+	.	Parent=comp160974_c0_seq1.mrna1;Target=comp160974_c0_seq1 1759 1750 .
Chr1	stalkie_big_nohaplotig	exon	106341091	106341408	90	+	.	Parent=comp160974_c0_seq1.mrna1;Target=comp160974_c0_seq1 2073 1760 .
Chr1	stalkie_big_nohaplotig	CDS	106231010	106231018	.	+	0	Parent=comp160974_c0_seq1.mrna1;Target=comp160974_c0_seq1 1708 1700 .
Chr1	stalkie_big_nohaplotig	CDS	106231925	106231930	.	+	0	Parent=comp160974_c0_seq1.mrna1;Target=comp160974_c0_seq1 1714 1709 .
Chr1	stalkie_big_nohaplotig	CDS	106244178	106244187	.	+	0	Parent=comp160974_c0_seq1.mrna1;Target=comp160974_c0_seq1 1724 1715 .
Chr1	stalkie_big_nohaplotig	CDS	106252269	106252272	.	+	2	Parent=comp160974_c0_seq1.mrna1;Target=comp160974_c0_seq1 1728 1725 .
Chr1	stalkie_big_nohaplotig	CDS	106257676	106257679	.	+	1	Parent=comp160974_c0_seq1.mrna1;Target=comp160974_c0_seq1 1732 1729 .
Chr1	stalkie_big_nohaplotig	CDS	106271744	106271747	.	+	0	Parent=comp160974_c0_seq1.mrna1;Target=comp160974_c0_seq1 1736 1733 .
Chr1	stalkie_big_nohaplotig	CDS	106287598	106287604	.	+	2	Parent=comp160974_c0_seq1.mrna1;Target=comp160974_c0_seq1 1743 1737 .
Chr1	stalkie_big_nohaplotig	CDS	106302214	106302219	.	+	1	Parent=comp160974_c0_seq1.mrna1;Target=comp160974_c0_seq1 1749 1744 .
Chr1	stalkie_big_nohaplotig	CDS	106307133	106307142	.	+	1	Parent=comp160974_c0_seq1.mrna1;Target=comp160974_c0_seq1 1759 1750 .
Chr1	stalkie_big_nohaplotig	CDS	106341091	106341093	.	+	0	Parent=comp160974_c0_seq1.mrna1;Target=comp160974_c0_seq1 1762 1760 .
Chr1	gffcl	locus	106233203	106233271	.	-	.	ID=RLOC_00009963;geneIDs=FBgn0025612.1.path1;transcripts=FBgn0025612.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106233203	106233271	.	-	.	ID=FBgn0025612.1.mrna1;geneID=FBgn0025612.1.path1;Name=FBgn0025612.1;Dir=indeterminatecoverage=14.4;identity=100.0;matches=69;mismatches=0;indels=0;unknowns=0;Target=FBgn0025612.1 69 1 .;locus=RLOC_00009963
Chr1	stalkie_big_nohaplotig	exon	106233203	106233271	100	-	.	Parent=FBgn0025612.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	106233203	106233271	.	-	0	Parent=FBgn0025612.1.mrna1
Chr1	gffcl	locus	106246722	106386850	.	-	.	ID=RLOC_00009964;geneIDs=comp147762_c0_seq1.path1,comp148093_c0_seq1.path1;transcripts=comp147762_c0_seq1.mrna1,comp148093_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106246722	106386850	.	-	.	ID=comp147762_c0_seq1.mrna1;geneID=comp147762_c0_seq1.path1;Name=comp147762_c0_seq1;Dir=indeterminatecoverage=32.6;identity=98.6;matches=768;mismatches=8;indels=3;unknowns=0;Target=comp147762_c0_seq1 504 394 .;locus=RLOC_00009964
Chr1	stalkie_big_nohaplotig	exon	106246722	106246730	100	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 797 789 .
Chr1	stalkie_big_nohaplotig	exon	106253616	106253621	100	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 788 783 .
Chr1	stalkie_big_nohaplotig	exon	106263603	106263611	100	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 760 752 .
Chr1	stalkie_big_nohaplotig	exon	106268162	106268164	100	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 751 749 .
Chr1	stalkie_big_nohaplotig	exon	106269567	106269572	100	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 748 743 .
Chr1	stalkie_big_nohaplotig	exon	106271746	106271754	88	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 742 734 .
Chr1	stalkie_big_nohaplotig	exon	106281246	106281248	100	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 733 731 .
Chr1	stalkie_big_nohaplotig	exon	106296298	106296299	100	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 730 729 .
Chr1	stalkie_big_nohaplotig	exon	106304112	106304127	68	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 728 716 .
Chr1	stalkie_big_nohaplotig	exon	106308066	106308074	88	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 715 707 .
Chr1	stalkie_big_nohaplotig	exon	106315818	106315821	100	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 706 703 .
Chr1	stalkie_big_nohaplotig	exon	106323818	106323824	100	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 702 696 .
Chr1	stalkie_big_nohaplotig	exon	106324868	106324877	100	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 695 686 .
Chr1	stalkie_big_nohaplotig	exon	106331460	106331464	100	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 685 681 .
Chr1	stalkie_big_nohaplotig	exon	106346650	106346653	100	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 680 677 .
Chr1	stalkie_big_nohaplotig	exon	106349014	106349016	100	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 676 674 .
Chr1	stalkie_big_nohaplotig	exon	106352742	106352746	100	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 673 669 .
Chr1	stalkie_big_nohaplotig	exon	106353887	106353891	100	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 668 664 .
Chr1	stalkie_big_nohaplotig	exon	106354559	106354568	100	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 663 654 .
Chr1	stalkie_big_nohaplotig	exon	106370404	106370408	100	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 653 649 .
Chr1	stalkie_big_nohaplotig	exon	106372922	106372927	100	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 648 643 .
Chr1	stalkie_big_nohaplotig	exon	106375603	106375604	100	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 642 641 .
Chr1	stalkie_big_nohaplotig	exon	106380969	106380972	100	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 640 637 .
Chr1	stalkie_big_nohaplotig	exon	106386215	106386850	99	-	.	Parent=comp147762_c0_seq1.mrna1;Target=comp147762_c0_seq1 636 1 .
Chr1	stalkie_big_nohaplotig	CDS	106386347	106386457	.	-	0	Parent=comp147762_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106346433	106349728	.	-	.	ID=comp148093_c0_seq1.mrna1;geneID=comp148093_c0_seq1.path1;Name=comp148093_c0_seq1;Dir=antisensecoverage=100.0;identity=98.5;matches=447;mismatches=7;indels=0;unknowns=0;Target=comp148093_c0_seq1 347 454 .;locus=RLOC_00009964
Chr1	stalkie_big_nohaplotig	exon	106346433	106346764	98	-	.	Parent=comp148093_c0_seq1.mrna1;Target=comp148093_c0_seq1 1 332 -
Chr1	stalkie_big_nohaplotig	exon	106349607	106349728	99	-	.	Parent=comp148093_c0_seq1.mrna1;Target=comp148093_c0_seq1 333 454 -
Chr1	stalkie_big_nohaplotig	CDS	106349621	106349728	.	-	0	Parent=comp148093_c0_seq1.mrna1
Chr1	gffcl	locus	106266917	106267264	.	+	.	ID=RLOC_00009965;geneIDs=comp152429_c1_seq1.path7;transcripts=comp152429_c1_seq1.mrna7
Chr1	stalkie_big_nohaplotig	mRNA	106266917	106267264	.	+	.	ID=comp152429_c1_seq1.mrna7;geneID=comp152429_c1_seq1.path7;Name=comp152429_c1_seq1;Dir=indeterminatecoverage=100.0;identity=92.5;matches=322;mismatches=26;indels=0;unknowns=0;Target=comp152429_c1_seq1 348 1 .;CDS_Target=comp152429_c1_seq1 34 2 .;locus=RLOC_00009965
Chr1	stalkie_big_nohaplotig	exon	106266917	106267264	92	+	.	Parent=comp152429_c1_seq1.mrna7
Chr1	stalkie_big_nohaplotig	CDS	106266918	106266950	.	+	0	Parent=comp152429_c1_seq1.mrna7
Chr1	gffcl	locus	106351740	106352701	.	-	.	ID=RLOC_00009967;geneIDs=comp158047_c0_seq1.path1;transcripts=comp158047_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106351740	106352701	.	-	.	ID=comp158047_c0_seq1.mrna1;geneID=comp158047_c0_seq1.path1;Name=comp158047_c0_seq1;Dir=sensecoverage=93.6;identity=99.8;matches=897;mismatches=2;indels=0;unknowns=0;locus=RLOC_00009967
Chr1	stalkie_big_nohaplotig	exon	106351740	106352368	99	-	.	Parent=comp158047_c0_seq1.mrna1;Target=comp158047_c0_seq1 332 960 +
Chr1	stalkie_big_nohaplotig	exon	106352432	106352701	100	-	.	Parent=comp158047_c0_seq1.mrna1;Target=comp158047_c0_seq1 62 331 +
Chr1	stalkie_big_nohaplotig	CDS	106351952	106352368	.	-	0	Parent=comp158047_c0_seq1.mrna1;Target=comp158047_c0_seq1 332 748 +
Chr1	stalkie_big_nohaplotig	CDS	106352432	106352605	.	-	0	Parent=comp158047_c0_seq1.mrna1;Target=comp158047_c0_seq1 158 331 +
Chr1	gffcl	locus	106362002	106363005	.	+	.	ID=RLOC_00009968;geneIDs=FBgn0044328.1.path1;transcripts=FBgn0044328.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106362002	106363005	.	+	.	ID=FBgn0044328.1.mrna1;geneID=FBgn0044328.1.path1;Name=FBgn0044328.1;Dir=indeterminatecoverage=41.3;identity=97.7;matches=998;mismatches=6;indels=17;unknowns=0;Target=FBgn0044328.1 2472 1452 .;CDS_Target=FBgn0044328.1 1525 1454 .;locus=RLOC_00009968
Chr1	stalkie_big_nohaplotig	exon	106362002	106363005	97	+	.	Parent=FBgn0044328.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	106362004	106362073	.	+	0	Parent=FBgn0044328.1.mrna1
Chr1	gffcl	locus	106386871	106387791	.	+	.	ID=RLOC_00009969;geneIDs=comp148570_c1_seq1.path1;transcripts=comp148570_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106386871	106387791	.	+	.	ID=comp148570_c1_seq1.mrna1;geneID=comp148570_c1_seq1.path1;Name=comp148570_c1_seq1;Dir=indeterminatecoverage=100.0;identity=95.3;matches=918;mismatches=3;indels=42;unknowns=0;Target=comp148570_c1_seq1 963 1 .;CDS_Target=comp148570_c1_seq1 956 681 .;locus=RLOC_00009969
Chr1	stalkie_big_nohaplotig	exon	106386871	106387791	95	+	.	Parent=comp148570_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	106387509	106387784	.	+	0	Parent=comp148570_c1_seq1.mrna1
Chr1	gffcl	locus	106416428	106417567	.	+	.	ID=RLOC_00009970;geneIDs=comp155955_c0_seq1.path1;transcripts=comp155955_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106416428	106417567	.	+	.	ID=comp155955_c0_seq1.mrna1;geneID=comp155955_c0_seq1.path1;Name=comp155955_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1136;mismatches=4;indels=1;unknowns=0;Target=comp155955_c0_seq1 1141 1 .;CDS_Target=comp155955_c0_seq1 811 656 .;locus=RLOC_00009970
Chr1	stalkie_big_nohaplotig	exon	106416428	106417567	99	+	.	Parent=comp155955_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	106417082	106417237	.	+	0	Parent=comp155955_c0_seq1.mrna1
Chr1	gffcl	locus	106418509	106419004	.	+	.	ID=RLOC_00009971;geneIDs=comp150063_c0_seq1.path1;transcripts=comp150063_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106418509	106419004	.	+	.	ID=comp150063_c0_seq1.mrna1;geneID=comp150063_c0_seq1.path1;Name=comp150063_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=495;mismatches=1;indels=0;unknowns=0;Target=comp150063_c0_seq1 496 1 .;CDS_Target=comp150063_c0_seq1 393 235 .;locus=RLOC_00009971
Chr1	stalkie_big_nohaplotig	exon	106418509	106419004	99	+	.	Parent=comp150063_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	106418743	106418901	.	+	0	Parent=comp150063_c0_seq1.mrna1
Chr1	gffcl	locus	106548509	106549718	.	-	.	ID=RLOC_00009973;geneIDs=comp154614_c0_seq1.path1;transcripts=comp154614_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106548509	106549718	.	-	.	ID=comp154614_c0_seq1.mrna1;geneID=comp154614_c0_seq1.path1;Name=comp154614_c0_seq1;Dir=antisensecoverage=97.6;identity=99.7;matches=1015;mismatches=3;indels=0;unknowns=0;Target=comp154614_c0_seq1 375 512 .;locus=RLOC_00009973
Chr1	stalkie_big_nohaplotig	exon	106548509	106548654	99	-	.	Parent=comp154614_c0_seq1.mrna1;Target=comp154614_c0_seq1 26 171 -
Chr1	stalkie_big_nohaplotig	exon	106548847	106549718	99	-	.	Parent=comp154614_c0_seq1.mrna1;Target=comp154614_c0_seq1 172 1043 -
Chr1	stalkie_big_nohaplotig	CDS	106549050	106549187	.	-	0	Parent=comp154614_c0_seq1.mrna1
Chr1	gffcl	locus	106551894	106553408	.	-	.	ID=RLOC_00009974;geneIDs=comp162613_c0_seq1.path1;transcripts=comp162613_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106551894	106553408	.	-	.	ID=comp162613_c0_seq1.mrna1;geneID=comp162613_c0_seq1.path1;Name=comp162613_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.8;matches=1513;mismatches=2;indels=1;unknowns=0;Target=comp162613_c0_seq1 1518 3 .;CDS_Target=comp162613_c0_seq1 818 681 .;locus=RLOC_00009974
Chr1	stalkie_big_nohaplotig	exon	106551894	106553408	99	-	.	Parent=comp162613_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	106552594	106552730	.	-	0	Parent=comp162613_c0_seq1.mrna1
Chr1	gffcl	locus	106563111	106563180	.	+	.	ID=RLOC_00009977;geneIDs=ORF867.path1;transcripts=ORF867.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106563111	106563180	.	+	.	ID=ORF867.mrna1;geneID=ORF867.path1;Name=ORF867;Dir=indeterminatecoverage=5.1;identity=100.0;matches=70;mismatches=0;indels=0;unknowns=0;Target=ORF867 70 1 .;locus=RLOC_00009977
Chr1	stalkie_big_nohaplotig	exon	106563111	106563180	100	+	.	Parent=ORF867.mrna1
Chr1	stalkie_big_nohaplotig	CDS	106563111	106563180	.	+	0	Parent=ORF867.mrna1
Chr1	gffcl	locus	106566686	106576420	.	-	.	ID=RLOC_00009978;geneIDs=comp160548_c5_seq1.path2;transcripts=comp160548_c5_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	106566686	106576420	.	-	.	ID=comp160548_c5_seq1.mrna2;geneID=comp160548_c5_seq1.path2;Name=comp160548_c5_seq1;Dir=indeterminatecoverage=72.9;identity=77.6;matches=871;mismatches=174;indels=77;unknowns=0;Target=comp160548_c5_seq1 943 806 .;locus=RLOC_00009978
Chr1	stalkie_big_nohaplotig	exon	106566686	106566967	86	-	.	Parent=comp160548_c5_seq1.mrna2;Target=comp160548_c5_seq1 1390 1119 .
Chr1	stalkie_big_nohaplotig	exon	106571427	106571489	55	-	.	Parent=comp160548_c5_seq1.mrna2;Target=comp160548_c5_seq1 1118 1051 .
Chr1	stalkie_big_nohaplotig	exon	106575698	106576420	76	-	.	Parent=comp160548_c5_seq1.mrna2;Target=comp160548_c5_seq1 1050 292 .
Chr1	stalkie_big_nohaplotig	CDS	106575783	106575913	.	-	0	Parent=comp160548_c5_seq1.mrna2
Chr1	gffcl	locus	106577491	108532461	.	+	.	ID=RLOC_00009979;geneIDs=comp162889_c0_seq1.path1;transcripts=comp162889_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	106577491	108532461	.	+	.	ID=comp162889_c0_seq1.mrna1;geneID=comp162889_c0_seq1.path1;Name=comp162889_c0_seq1;Dir=indeterminatecoverage=70.3;identity=83.1;matches=738;mismatches=88;indels=62;unknowns=0;Target=comp162889_c0_seq1 1088 1050 .;locus=RLOC_00009979
Chr1	stalkie_big_nohaplotig	exon	106577491	106577770	75	+	.	Parent=comp162889_c0_seq1.mrna1;Target=comp162889_c0_seq1 621 338 .
Chr1	stalkie_big_nohaplotig	exon	106577848	106577857	100	+	.	Parent=comp162889_c0_seq1.mrna1;Target=comp162889_c0_seq1 632 623 .
Chr1	stalkie_big_nohaplotig	exon	106577859	106577866	100	+	.	Parent=comp162889_c0_seq1.mrna1;Target=comp162889_c0_seq1 658 651 .
Chr1	stalkie_big_nohaplotig	exon	106577872	106577935	81	+	.	Parent=comp162889_c0_seq1.mrna1;Target=comp162889_c0_seq1 741 673 .
Chr1	stalkie_big_nohaplotig	exon	106578822	106578831	100	+	.	Parent=comp162889_c0_seq1.mrna1;Target=comp162889_c0_seq1 753 744 .
Chr1	stalkie_big_nohaplotig	exon	106578850	106578857	100	+	.	Parent=comp162889_c0_seq1.mrna1;Target=comp162889_c0_seq1 768 761 .
Chr1	stalkie_big_nohaplotig	exon	106585547	106585557	100	+	.	Parent=comp162889_c0_seq1.mrna1;Target=comp162889_c0_seq1 786 776 .
Chr1	stalkie_big_nohaplotig	exon	106585564	106585571	100	+	.	Parent=comp162889_c0_seq1.mrna1;Target=comp162889_c0_seq1 830 823 .
Chr1	stalkie_big_nohaplotig	exon	106586914	106586917	100	+	.	Parent=comp162889_c0_seq1.mrna1;Target=comp162889_c0_seq1 855 852 .
Chr1	stalkie_big_nohaplotig	exon	106587625	106588053	85	+	.	Parent=comp162889_c0_seq1.mrna1;Target=comp162889_c0_seq1 1255 856 .
Chr1	stalkie_big_nohaplotig	exon	108490500	108490502	100	+	.	Parent=comp162889_c0_seq1.mrna1;Target=comp162889_c0_seq1 1258 1256 .
Chr1	stalkie_big_nohaplotig	exon	108494621	108494623	100	+	.	Parent=comp162889_c0_seq1.mrna1;Target=comp162889_c0_seq1 1261 1259 .
Chr1	stalkie_big_nohaplotig	exon	108494875	108494882	100	+	.	Parent=comp162889_c0_seq1.mrna1;Target=comp162889_c0_seq1 1269 1262 .
Chr1	stalkie_big_nohaplotig	exon	108496067	108496070	100	+	.	Parent=comp162889_c0_seq1.mrna1;Target=comp162889_c0_seq1 1273 1270 .
Chr1	stalkie_big_nohaplotig	exon	108504158	108504163	100	+	.	Parent=comp162889_c0_seq1.mrna1;Target=comp162889_c0_seq1 1279 1274 .
Chr1	stalkie_big_nohaplotig	exon	108508664	108508667	100	+	.	Parent=comp162889_c0_seq1.mrna1;Target=comp162889_c0_seq1 1283 1280 .
Chr1	stalkie_big_nohaplotig	exon	108520121	108520122	100	+	.	Parent=comp162889_c0_seq1.mrna1;Target=comp162889_c0_seq1 1285 1284 .
Chr1	stalkie_big_nohaplotig	exon	108532457	108532461	100	+	.	Parent=comp162889_c0_seq1.mrna1;Target=comp162889_c0_seq1 1290 1286 .
Chr1	stalkie_big_nohaplotig	CDS	106587839	106587878	.	+	0	Parent=comp162889_c0_seq1.mrna1
Chr1	gffcl	locus	106756158	106758558	.	+	.	ID=RLOC_00009983;geneIDs=comp159257_c1_seq1.path3;transcripts=comp159257_c1_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	106756158	106758558	.	+	.	ID=comp159257_c1_seq1.mrna3;geneID=comp159257_c1_seq1.path3;Name=comp159257_c1_seq1;Dir=sensecoverage=100.0;identity=98.8;matches=1293;mismatches=13;indels=3;unknowns=0;locus=RLOC_00009983
Chr1	stalkie_big_nohaplotig	exon	106756158	106756476	99	+	.	Parent=comp159257_c1_seq1.mrna3;Target=comp159257_c1_seq1 1 319 +
Chr1	stalkie_big_nohaplotig	exon	106757100	106757404	99	+	.	Parent=comp159257_c1_seq1.mrna3;Target=comp159257_c1_seq1 320 625 +
Chr1	stalkie_big_nohaplotig	exon	106757541	106757594	100	+	.	Parent=comp159257_c1_seq1.mrna3;Target=comp159257_c1_seq1 626 679 +
Chr1	stalkie_big_nohaplotig	exon	106757684	106757932	100	+	.	Parent=comp159257_c1_seq1.mrna3;Target=comp159257_c1_seq1 680 928 +
Chr1	stalkie_big_nohaplotig	exon	106757996	106758023	100	+	.	Parent=comp159257_c1_seq1.mrna3;Target=comp159257_c1_seq1 929 956 +
Chr1	stalkie_big_nohaplotig	exon	106758094	106758170	98	+	.	Parent=comp159257_c1_seq1.mrna3;Target=comp159257_c1_seq1 957 1032 +
Chr1	stalkie_big_nohaplotig	exon	106758284	106758558	96	+	.	Parent=comp159257_c1_seq1.mrna3;Target=comp159257_c1_seq1 1033 1308 +
Chr1	stalkie_big_nohaplotig	CDS	106757402	106757404	.	+	0	Parent=comp159257_c1_seq1.mrna3;Target=comp159257_c1_seq1 623 625 +
Chr1	stalkie_big_nohaplotig	CDS	106757541	106757594	.	+	0	Parent=comp159257_c1_seq1.mrna3;Target=comp159257_c1_seq1 626 679 +
Chr1	stalkie_big_nohaplotig	CDS	106757684	106757932	.	+	0	Parent=comp159257_c1_seq1.mrna3;Target=comp159257_c1_seq1 680 928 +
Chr1	stalkie_big_nohaplotig	CDS	106757996	106758023	.	+	0	Parent=comp159257_c1_seq1.mrna3;Target=comp159257_c1_seq1 929 956 +
Chr1	stalkie_big_nohaplotig	CDS	106758094	106758159	.	+	2	Parent=comp159257_c1_seq1.mrna3;Target=comp159257_c1_seq1 957 1021 +
Chr1	gffcl	locus	106758978	106759723	.	-	.	ID=RLOC_00009984;geneIDs=comp86524_c0_seq1.path2;transcripts=comp86524_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	106758978	106759723	.	-	.	ID=comp86524_c0_seq1.mrna2;geneID=comp86524_c0_seq1.path2;Name=comp86524_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=606;mismatches=0;indels=0;unknowns=0;locus=RLOC_00009984
Chr1	stalkie_big_nohaplotig	exon	106758978	106759237	100	-	.	Parent=comp86524_c0_seq1.mrna2;Target=comp86524_c0_seq1 347 606 +
Chr1	stalkie_big_nohaplotig	exon	106759297	106759447	100	-	.	Parent=comp86524_c0_seq1.mrna2;Target=comp86524_c0_seq1 196 346 +
Chr1	stalkie_big_nohaplotig	exon	106759529	106759723	100	-	.	Parent=comp86524_c0_seq1.mrna2;Target=comp86524_c0_seq1 1 195 +
Chr1	stalkie_big_nohaplotig	CDS	106759315	106759447	.	-	1	Parent=comp86524_c0_seq1.mrna2;Target=comp86524_c0_seq1 196 328 +
Chr1	stalkie_big_nohaplotig	CDS	106759529	106759722	.	-	0	Parent=comp86524_c0_seq1.mrna2;Target=comp86524_c0_seq1 2 195 +
Chr1	gffcl	locus	106858354	106859604	.	+	.	ID=RLOC_00009986;geneIDs=Dp_FBgn0243606.path4;transcripts=Dp_FBgn0243606.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	106858354	106859604	.	+	.	ID=Dp_FBgn0243606.mrna4;geneID=Dp_FBgn0243606.path4;Name=Dp_FBgn0243606;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1230;mismatches=16;indels=0;unknowns=5;Target=Dp_FBgn0243606 1251 1 .;locus=RLOC_00009986
Chr1	stalkie_big_nohaplotig	exon	106858354	106859604	98	+	.	Parent=Dp_FBgn0243606.mrna4
Chr1	stalkie_big_nohaplotig	CDS	106858354	106859604	.	+	0	Parent=Dp_FBgn0243606.mrna4
Chr1	gffcl	locus	107017038	107019893	.	-	.	ID=RLOC_00009987;geneIDs=comp162769_c0_seq1.path1;transcripts=comp162769_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107017038	107019893	.	-	.	ID=comp162769_c0_seq1.mrna1;geneID=comp162769_c0_seq1.path1;Name=comp162769_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=2819;mismatches=37;indels=1;unknowns=0;Target=comp162769_c0_seq1 2857 1 .;CDS_Target=comp162769_c0_seq1 417 103 .;locus=RLOC_00009987
Chr1	stalkie_big_nohaplotig	exon	107017038	107019893	98	-	.	Parent=comp162769_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	107019477	107019791	.	-	0	Parent=comp162769_c0_seq1.mrna1
Chr1	gffcl	locus	107099373	107103207	.	+	.	ID=RLOC_00009989;geneIDs=comp163170_c1_seq1.path1;transcripts=comp163170_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107099373	107103207	.	+	.	ID=comp163170_c1_seq1.mrna1;geneID=comp163170_c1_seq1.path1;Name=comp163170_c1_seq1;Dir=indeterminatecoverage=22.4;identity=99.0;matches=877;mismatches=9;indels=0;unknowns=0;locus=RLOC_00009989
Chr1	stalkie_big_nohaplotig	exon	107099373	107099616	98	+	.	Parent=comp163170_c1_seq1.mrna1;Target=comp163170_c1_seq1 250 7 .
Chr1	stalkie_big_nohaplotig	exon	107102566	107103207	99	+	.	Parent=comp163170_c1_seq1.mrna1;Target=comp163170_c1_seq1 892 251 .
Chr1	gffcl	locus	107116854	107117483	.	+	.	ID=RLOC_00009990;geneIDs=comp459122_c0_seq1.path1;transcripts=comp459122_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107116854	107117483	.	+	.	ID=comp459122_c0_seq1.mrna1;geneID=comp459122_c0_seq1.path1;Name=comp459122_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=628;mismatches=2;indels=0;unknowns=0;Target=comp459122_c0_seq1 630 1 .;CDS_Target=comp459122_c0_seq1 589 422 .;locus=RLOC_00009990
Chr1	stalkie_big_nohaplotig	exon	107116854	107117483	99	+	.	Parent=comp459122_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	107117275	107117442	.	+	0	Parent=comp459122_c0_seq1.mrna1
Chr1	gffcl	locus	107136468	107137394	.	-	.	ID=RLOC_00009991;geneIDs=comp144255_c0_seq1.path1;transcripts=comp144255_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107136468	107137394	.	-	.	ID=comp144255_c0_seq1.mrna1;geneID=comp144255_c0_seq1.path1;Name=comp144255_c0_seq1;Dir=sensecoverage=97.2;identity=99.5;matches=655;mismatches=3;indels=0;unknowns=0;Target=comp144255_c0_seq1 408 509 +;locus=RLOC_00009991
Chr1	stalkie_big_nohaplotig	exon	107136468	107137019	99	-	.	Parent=comp144255_c0_seq1.mrna1;Target=comp144255_c0_seq1 107 658 +
Chr1	stalkie_big_nohaplotig	exon	107137289	107137394	99	-	.	Parent=comp144255_c0_seq1.mrna1;Target=comp144255_c0_seq1 1 106 +
Chr1	stalkie_big_nohaplotig	CDS	107136617	107136718	.	-	0	Parent=comp144255_c0_seq1.mrna1
Chr1	gffcl	locus	107150644	107152422	.	+	.	ID=RLOC_00009992;geneIDs=FBgn0030555.1.path1;transcripts=FBgn0030555.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107150644	107152422	.	+	.	ID=FBgn0030555.1.mrna1;geneID=FBgn0030555.1.path1;Name=FBgn0030555.1;Dir=sensecoverage=65.1;identity=99.9;matches=1441;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009992
Chr1	stalkie_big_nohaplotig	exon	107150644	107151213	99	+	.	Parent=FBgn0030555.1.mrna1;Target=FBgn0030555.1 1 570 +
Chr1	stalkie_big_nohaplotig	exon	107151280	107151373	100	+	.	Parent=FBgn0030555.1.mrna1;Target=FBgn0030555.1 571 664 +
Chr1	stalkie_big_nohaplotig	exon	107151438	107151642	100	+	.	Parent=FBgn0030555.1.mrna1;Target=FBgn0030555.1 665 869 +
Chr1	stalkie_big_nohaplotig	exon	107151736	107151872	100	+	.	Parent=FBgn0030555.1.mrna1;Target=FBgn0030555.1 870 1006 +
Chr1	stalkie_big_nohaplotig	exon	107151929	107152113	100	+	.	Parent=FBgn0030555.1.mrna1;Target=FBgn0030555.1 1007 1191 +
Chr1	stalkie_big_nohaplotig	exon	107152172	107152422	100	+	.	Parent=FBgn0030555.1.mrna1;Target=FBgn0030555.1 1192 1442 +
Chr1	stalkie_big_nohaplotig	CDS	107150644	107151213	.	+	0	Parent=FBgn0030555.1.mrna1;Target=FBgn0030555.1 1 570 +
Chr1	stalkie_big_nohaplotig	CDS	107151280	107151373	.	+	0	Parent=FBgn0030555.1.mrna1;Target=FBgn0030555.1 571 664 +
Chr1	stalkie_big_nohaplotig	CDS	107151438	107151642	.	+	2	Parent=FBgn0030555.1.mrna1;Target=FBgn0030555.1 665 869 +
Chr1	stalkie_big_nohaplotig	CDS	107151736	107151872	.	+	1	Parent=FBgn0030555.1.mrna1;Target=FBgn0030555.1 870 1006 +
Chr1	stalkie_big_nohaplotig	CDS	107151929	107152113	.	+	2	Parent=FBgn0030555.1.mrna1;Target=FBgn0030555.1 1007 1191 +
Chr1	stalkie_big_nohaplotig	CDS	107152172	107152422	.	+	0	Parent=FBgn0030555.1.mrna1;Target=FBgn0030555.1 1192 1442 +
Chr1	gffcl	locus	107162348	107165049	.	+	.	ID=RLOC_00009993;geneIDs=FBgn0017566.1.path1;transcripts=FBgn0017566.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107162348	107165049	.	+	.	ID=FBgn0017566.1.mrna1;geneID=FBgn0017566.1.path1;Name=FBgn0017566.1;Dir=sensecoverage=100.0;identity=99.6;matches=2194;mismatches=8;indels=0;unknowns=0;locus=RLOC_00009993
Chr1	stalkie_big_nohaplotig	exon	107162348	107162533	100	+	.	Parent=FBgn0017566.1.mrna1;Target=FBgn0017566.1 1 186 +
Chr1	stalkie_big_nohaplotig	exon	107162592	107162923	98	+	.	Parent=FBgn0017566.1.mrna1;Target=FBgn0017566.1 187 518 +
Chr1	stalkie_big_nohaplotig	exon	107162990	107163226	99	+	.	Parent=FBgn0017566.1.mrna1;Target=FBgn0017566.1 519 755 +
Chr1	stalkie_big_nohaplotig	exon	107163289	107163752	99	+	.	Parent=FBgn0017566.1.mrna1;Target=FBgn0017566.1 756 1219 +
Chr1	stalkie_big_nohaplotig	exon	107163805	107164136	100	+	.	Parent=FBgn0017566.1.mrna1;Target=FBgn0017566.1 1220 1551 +
Chr1	stalkie_big_nohaplotig	exon	107164192	107164558	100	+	.	Parent=FBgn0017566.1.mrna1;Target=FBgn0017566.1 1552 1918 +
Chr1	stalkie_big_nohaplotig	exon	107164680	107164807	100	+	.	Parent=FBgn0017566.1.mrna1;Target=FBgn0017566.1 1919 2046 +
Chr1	stalkie_big_nohaplotig	exon	107164894	107165049	100	+	.	Parent=FBgn0017566.1.mrna1;Target=FBgn0017566.1 2047 2202 +
Chr1	stalkie_big_nohaplotig	CDS	107162348	107162533	.	+	0	Parent=FBgn0017566.1.mrna1;Target=FBgn0017566.1 1 186 +
Chr1	stalkie_big_nohaplotig	CDS	107162592	107162923	.	+	0	Parent=FBgn0017566.1.mrna1;Target=FBgn0017566.1 187 518 +
Chr1	stalkie_big_nohaplotig	CDS	107162990	107163226	.	+	1	Parent=FBgn0017566.1.mrna1;Target=FBgn0017566.1 519 755 +
Chr1	stalkie_big_nohaplotig	CDS	107163289	107163752	.	+	1	Parent=FBgn0017566.1.mrna1;Target=FBgn0017566.1 756 1219 +
Chr1	stalkie_big_nohaplotig	CDS	107163805	107164136	.	+	2	Parent=FBgn0017566.1.mrna1;Target=FBgn0017566.1 1220 1551 +
Chr1	stalkie_big_nohaplotig	CDS	107164192	107164558	.	+	0	Parent=FBgn0017566.1.mrna1;Target=FBgn0017566.1 1552 1918 +
Chr1	stalkie_big_nohaplotig	CDS	107164680	107164807	.	+	2	Parent=FBgn0017566.1.mrna1;Target=FBgn0017566.1 1919 2046 +
Chr1	stalkie_big_nohaplotig	CDS	107164894	107165049	.	+	0	Parent=FBgn0017566.1.mrna1;Target=FBgn0017566.1 2047 2202 +
Chr1	gffcl	locus	107168194	107169559	.	.	.	ID=RLOC_00009994;geneIDs=comp115719_c0_seq1.path1,comp156681_c0_seq1.path1;transcripts=comp156681_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107168674	107169559	.	-	.	ID=comp156681_c0_seq1.mrna1;geneID=comp156681_c0_seq1.path1;Name=comp156681_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=858;mismatches=26;indels=3;unknowns=0;Target=comp156681_c0_seq1 885 1 .;CDS_Target=comp156681_c0_seq1 415 401 .;locus=RLOC_00009994
Chr1	stalkie_big_nohaplotig	exon	107168674	107169559	96	-	.	Parent=comp156681_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	107169143	107169157	.	-	0	Parent=comp156681_c0_seq1.mrna1
Chr1	gffcl	locus	107180958	107188773	.	+	.	ID=RLOC_00009996;geneIDs=FBgn0027280.1.path1;transcripts=FBgn0027280.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107180958	107188773	.	+	.	ID=FBgn0027280.1.mrna1;geneID=FBgn0027280.1.path1;Name=FBgn0027280.1;Dir=sensecoverage=100.0;identity=99.9;matches=1997;mismatches=1;indels=0;unknowns=0;locus=RLOC_00009996
Chr1	stalkie_big_nohaplotig	exon	107180958	107181242	100	+	.	Parent=FBgn0027280.1.mrna1;Target=FBgn0027280.1 1 285 +
Chr1	stalkie_big_nohaplotig	exon	107181326	107181643	100	+	.	Parent=FBgn0027280.1.mrna1;Target=FBgn0027280.1 286 603 +
Chr1	stalkie_big_nohaplotig	exon	107187034	107187175	100	+	.	Parent=FBgn0027280.1.mrna1;Target=FBgn0027280.1 604 745 +
Chr1	stalkie_big_nohaplotig	exon	107187247	107187602	100	+	.	Parent=FBgn0027280.1.mrna1;Target=FBgn0027280.1 746 1101 +
Chr1	stalkie_big_nohaplotig	exon	107187664	107187756	100	+	.	Parent=FBgn0027280.1.mrna1;Target=FBgn0027280.1 1102 1194 +
Chr1	stalkie_big_nohaplotig	exon	107187836	107187963	100	+	.	Parent=FBgn0027280.1.mrna1;Target=FBgn0027280.1 1195 1322 +
Chr1	stalkie_big_nohaplotig	exon	107188033	107188419	99	+	.	Parent=FBgn0027280.1.mrna1;Target=FBgn0027280.1 1323 1709 +
Chr1	stalkie_big_nohaplotig	exon	107188485	107188773	100	+	.	Parent=FBgn0027280.1.mrna1;Target=FBgn0027280.1 1710 1998 +
Chr1	stalkie_big_nohaplotig	CDS	107180958	107181242	.	+	0	Parent=FBgn0027280.1.mrna1;Target=FBgn0027280.1 1 285 +
Chr1	stalkie_big_nohaplotig	CDS	107181326	107181643	.	+	0	Parent=FBgn0027280.1.mrna1;Target=FBgn0027280.1 286 603 +
Chr1	stalkie_big_nohaplotig	CDS	107187034	107187175	.	+	0	Parent=FBgn0027280.1.mrna1;Target=FBgn0027280.1 604 745 +
Chr1	stalkie_big_nohaplotig	CDS	107187247	107187602	.	+	2	Parent=FBgn0027280.1.mrna1;Target=FBgn0027280.1 746 1101 +
Chr1	stalkie_big_nohaplotig	CDS	107187664	107187756	.	+	0	Parent=FBgn0027280.1.mrna1;Target=FBgn0027280.1 1102 1194 +
Chr1	stalkie_big_nohaplotig	CDS	107187836	107187963	.	+	0	Parent=FBgn0027280.1.mrna1;Target=FBgn0027280.1 1195 1322 +
Chr1	stalkie_big_nohaplotig	CDS	107188033	107188419	.	+	1	Parent=FBgn0027280.1.mrna1;Target=FBgn0027280.1 1323 1709 +
Chr1	stalkie_big_nohaplotig	CDS	107188485	107188773	.	+	1	Parent=FBgn0027280.1.mrna1;Target=FBgn0027280.1 1710 1998 +
Chr1	gffcl	locus	107209034	107209546	.	-	.	ID=RLOC_00009997;geneIDs=comp149819_c0_seq1.path1;transcripts=comp149819_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107209034	107209546	.	-	.	ID=comp149819_c0_seq1.mrna1;geneID=comp149819_c0_seq1.path1;Name=comp149819_c0_seq1;Dir=indeterminatecoverage=96.8;identity=98.6;matches=507;mismatches=6;indels=1;unknowns=0;Target=comp149819_c0_seq1 531 18 .;CDS_Target=comp149819_c0_seq1 304 269 .;locus=RLOC_00009997
Chr1	stalkie_big_nohaplotig	exon	107209034	107209546	98	-	.	Parent=comp149819_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	107209261	107209296	.	-	0	Parent=comp149819_c0_seq1.mrna1
Chr1	gffcl	locus	107209651	107210734	.	-	.	ID=RLOC_00009998;geneIDs=FBgn0030555.1.path2;transcripts=FBgn0030555.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	107209651	107210734	.	-	.	ID=FBgn0030555.1.mrna2;geneID=FBgn0030555.1.path2;Name=FBgn0030555.1;Dir=sensecoverage=34.9;identity=99.5;matches=768;mismatches=4;indels=0;unknowns=0;locus=RLOC_00009998
Chr1	stalkie_big_nohaplotig	exon	107209651	107209719	100	-	.	Parent=FBgn0030555.1.mrna2;Target=FBgn0030555.1 2146 2214 +
Chr1	stalkie_big_nohaplotig	exon	107209790	107209859	100	-	.	Parent=FBgn0030555.1.mrna2;Target=FBgn0030555.1 2076 2145 +
Chr1	stalkie_big_nohaplotig	exon	107209918	107210109	100	-	.	Parent=FBgn0030555.1.mrna2;Target=FBgn0030555.1 1884 2075 +
Chr1	stalkie_big_nohaplotig	exon	107210166	107210331	99	-	.	Parent=FBgn0030555.1.mrna2;Target=FBgn0030555.1 1718 1883 +
Chr1	stalkie_big_nohaplotig	exon	107210400	107210564	99	-	.	Parent=FBgn0030555.1.mrna2;Target=FBgn0030555.1 1553 1717 +
Chr1	stalkie_big_nohaplotig	exon	107210625	107210734	98	-	.	Parent=FBgn0030555.1.mrna2;Target=FBgn0030555.1 1443 1552 +
Chr1	stalkie_big_nohaplotig	CDS	107209651	107209719	.	-	1	Parent=FBgn0030555.1.mrna2;Target=FBgn0030555.1 2146 2214 +
Chr1	stalkie_big_nohaplotig	CDS	107209790	107209859	.	-	2	Parent=FBgn0030555.1.mrna2;Target=FBgn0030555.1 2076 2145 +
Chr1	stalkie_big_nohaplotig	CDS	107209918	107210109	.	-	2	Parent=FBgn0030555.1.mrna2;Target=FBgn0030555.1 1884 2075 +
Chr1	stalkie_big_nohaplotig	CDS	107210166	107210331	.	-	0	Parent=FBgn0030555.1.mrna2;Target=FBgn0030555.1 1718 1883 +
Chr1	stalkie_big_nohaplotig	CDS	107210400	107210564	.	-	0	Parent=FBgn0030555.1.mrna2;Target=FBgn0030555.1 1553 1717 +
Chr1	stalkie_big_nohaplotig	CDS	107210625	107210734	.	-	2	Parent=FBgn0030555.1.mrna2;Target=FBgn0030555.1 1443 1552 +
Chr1	gffcl	locus	107245613	107267099	.	+	.	ID=RLOC_00010000;geneIDs=FBgn0029791.1.path1;transcripts=FBgn0029791.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107245613	107267099	.	+	.	ID=FBgn0029791.1.mrna1;geneID=FBgn0029791.1.path1;Name=FBgn0029791.1;Dir=sensecoverage=100.0;identity=99.7;matches=3131;mismatches=10;indels=0;unknowns=0;locus=RLOC_00010000
Chr1	stalkie_big_nohaplotig	exon	107245613	107245700	100	+	.	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 1 88 +
Chr1	stalkie_big_nohaplotig	exon	107250497	107250710	100	+	.	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 89 302 +
Chr1	stalkie_big_nohaplotig	exon	107250774	107250933	100	+	.	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 303 462 +
Chr1	stalkie_big_nohaplotig	exon	107254304	107254423	99	+	.	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 463 582 +
Chr1	stalkie_big_nohaplotig	exon	107254697	107254834	100	+	.	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 583 720 +
Chr1	stalkie_big_nohaplotig	exon	107255044	107255537	99	+	.	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 721 1214 +
Chr1	stalkie_big_nohaplotig	exon	107257396	107257494	98	+	.	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 1215 1313 +
Chr1	stalkie_big_nohaplotig	exon	107257592	107257705	100	+	.	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 1314 1427 +
Chr1	stalkie_big_nohaplotig	exon	107262511	107262657	100	+	.	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 1428 1574 +
Chr1	stalkie_big_nohaplotig	exon	107262711	107262960	100	+	.	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 1575 1824 +
Chr1	stalkie_big_nohaplotig	exon	107263025	107263212	100	+	.	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 1825 2012 +
Chr1	stalkie_big_nohaplotig	exon	107263276	107263403	100	+	.	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 2013 2140 +
Chr1	stalkie_big_nohaplotig	exon	107263468	107263595	100	+	.	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 2141 2268 +
Chr1	stalkie_big_nohaplotig	exon	107264925	107265017	100	+	.	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 2269 2361 +
Chr1	stalkie_big_nohaplotig	exon	107266094	107266372	98	+	.	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 2362 2640 +
Chr1	stalkie_big_nohaplotig	exon	107266438	107266615	99	+	.	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 2641 2818 +
Chr1	stalkie_big_nohaplotig	exon	107266777	107267099	99	+	.	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 2819 3141 +
Chr1	stalkie_big_nohaplotig	CDS	107245613	107245700	.	+	0	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 1 88 +
Chr1	stalkie_big_nohaplotig	CDS	107250497	107250710	.	+	2	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 89 302 +
Chr1	stalkie_big_nohaplotig	CDS	107250774	107250933	.	+	1	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 303 462 +
Chr1	stalkie_big_nohaplotig	CDS	107254304	107254423	.	+	0	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 463 582 +
Chr1	stalkie_big_nohaplotig	CDS	107254697	107254834	.	+	0	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 583 720 +
Chr1	stalkie_big_nohaplotig	CDS	107255044	107255537	.	+	0	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 721 1214 +
Chr1	stalkie_big_nohaplotig	CDS	107257396	107257494	.	+	1	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 1215 1313 +
Chr1	stalkie_big_nohaplotig	CDS	107257592	107257705	.	+	1	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 1314 1427 +
Chr1	stalkie_big_nohaplotig	CDS	107262511	107262657	.	+	1	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 1428 1574 +
Chr1	stalkie_big_nohaplotig	CDS	107262711	107262960	.	+	1	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 1575 1824 +
Chr1	stalkie_big_nohaplotig	CDS	107263025	107263212	.	+	0	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 1825 2012 +
Chr1	stalkie_big_nohaplotig	CDS	107263276	107263403	.	+	1	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 2013 2140 +
Chr1	stalkie_big_nohaplotig	CDS	107263468	107263595	.	+	2	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 2141 2268 +
Chr1	stalkie_big_nohaplotig	CDS	107264925	107265017	.	+	0	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 2269 2361 +
Chr1	stalkie_big_nohaplotig	CDS	107266094	107266372	.	+	0	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 2362 2640 +
Chr1	stalkie_big_nohaplotig	CDS	107266438	107266615	.	+	0	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 2641 2818 +
Chr1	stalkie_big_nohaplotig	CDS	107266777	107267099	.	+	2	Parent=FBgn0029791.1.mrna1;Target=FBgn0029791.1 2819 3141 +
Chr1	gffcl	locus	107267422	107385898	.	-	.	ID=RLOC_00010001;geneIDs=FBgn0053080.1.path1;transcripts=FBgn0053080.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107267422	107385898	.	-	.	ID=FBgn0053080.1.mrna1;geneID=FBgn0053080.1.path1;Name=FBgn0053080.1;Dir=sensecoverage=100.0;identity=99.6;matches=2661;mismatches=11;indels=1;unknowns=0;Target=FBgn0053080.1 3 104 +;locus=RLOC_00010001
Chr1	stalkie_big_nohaplotig	exon	107267422	107267555	99	-	.	Parent=FBgn0053080.1.mrna1;Target=FBgn0053080.1 2540 2673 +
Chr1	stalkie_big_nohaplotig	exon	107267620	107269474	99	-	.	Parent=FBgn0053080.1.mrna1;Target=FBgn0053080.1 685 2539 +
Chr1	stalkie_big_nohaplotig	exon	107269542	107269637	98	-	.	Parent=FBgn0053080.1.mrna1;Target=FBgn0053080.1 589 684 +
Chr1	stalkie_big_nohaplotig	exon	107270285	107270453	98	-	.	Parent=FBgn0053080.1.mrna1;Target=FBgn0053080.1 420 588 +
Chr1	stalkie_big_nohaplotig	exon	107373542	107373663	98	-	.	Parent=FBgn0053080.1.mrna1;Target=FBgn0053080.1 298 419 +
Chr1	stalkie_big_nohaplotig	exon	107385603	107385898	99	-	.	Parent=FBgn0053080.1.mrna1;Target=FBgn0053080.1 1 297 +
Chr1	stalkie_big_nohaplotig	CDS	107385796	107385896	.	-	0	Parent=FBgn0053080.1.mrna1
Chr1	gffcl	locus	107302487	107312177	.	+	.	ID=RLOC_00010002;geneIDs=FBgn0029858.1.path1;transcripts=FBgn0029858.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107302487	107312177	.	+	.	ID=FBgn0029858.1.mrna1;geneID=FBgn0029858.1.path1;Name=FBgn0029858.1;Dir=sensecoverage=100.0;identity=99.9;matches=1622;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010002
Chr1	stalkie_big_nohaplotig	exon	107302487	107303644	100	+	.	Parent=FBgn0029858.1.mrna1;Target=FBgn0029858.1 1 1158 +
Chr1	stalkie_big_nohaplotig	exon	107303700	107303836	100	+	.	Parent=FBgn0029858.1.mrna1;Target=FBgn0029858.1 1159 1295 +
Chr1	stalkie_big_nohaplotig	exon	107311785	107311977	100	+	.	Parent=FBgn0029858.1.mrna1;Target=FBgn0029858.1 1296 1488 +
Chr1	stalkie_big_nohaplotig	exon	107312043	107312177	99	+	.	Parent=FBgn0029858.1.mrna1;Target=FBgn0029858.1 1489 1623 +
Chr1	stalkie_big_nohaplotig	CDS	107302487	107303644	.	+	0	Parent=FBgn0029858.1.mrna1;Target=FBgn0029858.1 1 1158 +
Chr1	stalkie_big_nohaplotig	CDS	107303700	107303836	.	+	0	Parent=FBgn0029858.1.mrna1;Target=FBgn0029858.1 1159 1295 +
Chr1	stalkie_big_nohaplotig	CDS	107311785	107311977	.	+	1	Parent=FBgn0029858.1.mrna1;Target=FBgn0029858.1 1296 1488 +
Chr1	stalkie_big_nohaplotig	CDS	107312043	107312177	.	+	0	Parent=FBgn0029858.1.mrna1;Target=FBgn0029858.1 1489 1623 +
Chr1	gffcl	locus	107307476	107309548	.	+	.	ID=RLOC_00010003;geneIDs=FBgn0031631.1.path1;transcripts=FBgn0031631.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107307476	107309548	.	+	.	ID=FBgn0031631.1.mrna1;geneID=FBgn0031631.1.path1;Name=FBgn0031631.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=2066;mismatches=7;indels=0;unknowns=0;Target=FBgn0031631.1 2073 1 .;locus=RLOC_00010003
Chr1	stalkie_big_nohaplotig	exon	107307476	107309548	99	+	.	Parent=FBgn0031631.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	107307476	107309548	.	+	0	Parent=FBgn0031631.1.mrna1
Chr1	gffcl	locus	107315211	107318879	.	-	.	ID=RLOC_00010005;geneIDs=FBgn0263855.path1;transcripts=FBgn0263855.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107315211	107318879	.	-	.	ID=FBgn0263855.mrna1;geneID=FBgn0263855.path1;Name=FBgn0263855;Dir=sensecoverage=100.0;identity=99.4;matches=1664;mismatches=9;indels=1;unknowns=0;Target=FBgn0263855 3 104 +;locus=RLOC_00010005
Chr1	stalkie_big_nohaplotig	exon	107315211	107315435	99	-	.	Parent=FBgn0263855.mrna1;Target=FBgn0263855 1450 1674 +
Chr1	stalkie_big_nohaplotig	exon	107317327	107317441	100	-	.	Parent=FBgn0263855.mrna1;Target=FBgn0263855 1335 1449 +
Chr1	stalkie_big_nohaplotig	exon	107317547	107318879	99	-	.	Parent=FBgn0263855.mrna1;Target=FBgn0263855 1 1334 +
Chr1	stalkie_big_nohaplotig	CDS	107318777	107318877	.	-	0	Parent=FBgn0263855.mrna1
Chr1	gffcl	locus	107316611	107317350	.	+	.	ID=RLOC_00010006;geneIDs=comp143238_c0_seq1.path1;transcripts=comp143238_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107316611	107317350	.	+	.	ID=comp143238_c0_seq1.mrna1;geneID=comp143238_c0_seq1.path1;Name=comp143238_c0_seq1;Dir=antisensecoverage=99.9;identity=100.0;matches=678;mismatches=0;indels=0;unknowns=0;Target=comp143238_c0_seq1 536 631 .;locus=RLOC_00010006
Chr1	stalkie_big_nohaplotig	exon	107316611	107316753	100	+	.	Parent=comp143238_c0_seq1.mrna1;Target=comp143238_c0_seq1 536 678 -
Chr1	stalkie_big_nohaplotig	exon	107316816	107317350	100	+	.	Parent=comp143238_c0_seq1.mrna1;Target=comp143238_c0_seq1 1 535 -
Chr1	stalkie_big_nohaplotig	CDS	107316658	107316753	.	+	0	Parent=comp143238_c0_seq1.mrna1
Chr1	gffcl	locus	107333303	107333785	.	-	.	ID=RLOC_00010007;geneIDs=comp142217_c0_seq1.path1;transcripts=comp142217_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107333303	107333785	.	-	.	ID=comp142217_c0_seq1.mrna1;geneID=comp142217_c0_seq1.path1;Name=comp142217_c0_seq1;Dir=sensecoverage=100.0;identity=98.6;matches=423;mismatches=5;indels=1;unknowns=0;Target=comp142217_c0_seq1 3 92 +;locus=RLOC_00010007
Chr1	stalkie_big_nohaplotig	exon	107333303	107333374	98	-	.	Parent=comp142217_c0_seq1.mrna1;Target=comp142217_c0_seq1 358 429 +
Chr1	stalkie_big_nohaplotig	exon	107333430	107333785	98	-	.	Parent=comp142217_c0_seq1.mrna1;Target=comp142217_c0_seq1 1 357 +
Chr1	stalkie_big_nohaplotig	CDS	107333694	107333783	.	-	0	Parent=comp142217_c0_seq1.mrna1
Chr1	gffcl	locus	107389227	107389919	.	+	.	ID=RLOC_00010008;geneIDs=comp84409_c0_seq1.path1;transcripts=comp84409_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107389227	107389919	.	+	.	ID=comp84409_c0_seq1.mrna1;geneID=comp84409_c0_seq1.path1;Name=comp84409_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=682;mismatches=11;indels=0;unknowns=0;Target=comp84409_c0_seq1 693 1 .;CDS_Target=comp84409_c0_seq1 693 589 .;locus=RLOC_00010008
Chr1	stalkie_big_nohaplotig	exon	107389227	107389919	98	+	.	Parent=comp84409_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	107389815	107389919	.	+	0	Parent=comp84409_c0_seq1.mrna1
Chr1	gffcl	locus	107394387	107396478	.	+	.	ID=RLOC_00010009;geneIDs=FBgn0031519.1.path1;transcripts=FBgn0031519.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107394387	107396478	.	+	.	ID=FBgn0031519.1.mrna1;geneID=FBgn0031519.1.path1;Name=FBgn0031519.1;Dir=sensecoverage=100.0;identity=99.4;matches=1226;mismatches=7;indels=0;unknowns=0;locus=RLOC_00010009
Chr1	stalkie_big_nohaplotig	exon	107394387	107394542	100	+	.	Parent=FBgn0031519.1.mrna1;Target=FBgn0031519.1 1 156 +
Chr1	stalkie_big_nohaplotig	exon	107394603	107394703	99	+	.	Parent=FBgn0031519.1.mrna1;Target=FBgn0031519.1 157 257 +
Chr1	stalkie_big_nohaplotig	exon	107394761	107394912	100	+	.	Parent=FBgn0031519.1.mrna1;Target=FBgn0031519.1 258 409 +
Chr1	stalkie_big_nohaplotig	exon	107394981	107395270	98	+	.	Parent=FBgn0031519.1.mrna1;Target=FBgn0031519.1 410 699 +
Chr1	stalkie_big_nohaplotig	exon	107395333	107395410	100	+	.	Parent=FBgn0031519.1.mrna1;Target=FBgn0031519.1 700 777 +
Chr1	stalkie_big_nohaplotig	exon	107395962	107396303	99	+	.	Parent=FBgn0031519.1.mrna1;Target=FBgn0031519.1 778 1119 +
Chr1	stalkie_big_nohaplotig	exon	107396365	107396478	100	+	.	Parent=FBgn0031519.1.mrna1;Target=FBgn0031519.1 1120 1233 +
Chr1	stalkie_big_nohaplotig	CDS	107394387	107394542	.	+	0	Parent=FBgn0031519.1.mrna1;Target=FBgn0031519.1 1 156 +
Chr1	stalkie_big_nohaplotig	CDS	107394603	107394703	.	+	0	Parent=FBgn0031519.1.mrna1;Target=FBgn0031519.1 157 257 +
Chr1	stalkie_big_nohaplotig	CDS	107394761	107394912	.	+	1	Parent=FBgn0031519.1.mrna1;Target=FBgn0031519.1 258 409 +
Chr1	stalkie_big_nohaplotig	CDS	107394981	107395270	.	+	2	Parent=FBgn0031519.1.mrna1;Target=FBgn0031519.1 410 699 +
Chr1	stalkie_big_nohaplotig	CDS	107395333	107395410	.	+	0	Parent=FBgn0031519.1.mrna1;Target=FBgn0031519.1 700 777 +
Chr1	stalkie_big_nohaplotig	CDS	107395962	107396303	.	+	0	Parent=FBgn0031519.1.mrna1;Target=FBgn0031519.1 778 1119 +
Chr1	stalkie_big_nohaplotig	CDS	107396365	107396478	.	+	0	Parent=FBgn0031519.1.mrna1;Target=FBgn0031519.1 1120 1233 +
Chr1	stalkie_big_nohaplotig	mRNA	107403348	107406574	.	-	.	ID=comp742626_c0_seq1.mrna1;geneID=comp742626_c0_seq1.path1;Name=comp742626_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=247;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010010
Chr1	stalkie_big_nohaplotig	exon	107403348	107403371	100	-	.	Parent=comp742626_c0_seq1.mrna1;Target=comp742626_c0_seq1 1 24 -
Chr1	stalkie_big_nohaplotig	exon	107406352	107406574	100	-	.	Parent=comp742626_c0_seq1.mrna1;Target=comp742626_c0_seq1 25 247 -
Chr1	stalkie_big_nohaplotig	CDS	107403350	107403371	.	-	1	Parent=comp742626_c0_seq1.mrna1;Target=comp742626_c0_seq1 3 24 .
Chr1	stalkie_big_nohaplotig	CDS	107406352	107406431	.	-	0	Parent=comp742626_c0_seq1.mrna1;Target=comp742626_c0_seq1 25 104 .
Chr1	gffcl	locus	107417287	107418063	.	-	.	ID=RLOC_00010011;geneIDs=ORF3037.path1;transcripts=ORF3037.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107417287	107418063	.	-	.	ID=ORF3037.mrna1;geneID=ORF3037.path1;Name=ORF3037;Dir=indeterminatecoverage=100.0;identity=99.9;matches=776;mismatches=1;indels=0;unknowns=0;Target=ORF3037 777 1 .;locus=RLOC_00010011
Chr1	stalkie_big_nohaplotig	exon	107417287	107418063	99	-	.	Parent=ORF3037.mrna1
Chr1	stalkie_big_nohaplotig	CDS	107417287	107418063	.	-	0	Parent=ORF3037.mrna1
Chr1	gffcl	locus	107428688	107429554	.	+	.	ID=RLOC_00010012;geneIDs=comp147968_c0_seq1.path1;transcripts=comp147968_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107428688	107429554	.	+	.	ID=comp147968_c0_seq1.mrna1;geneID=comp147968_c0_seq1.path1;Name=comp147968_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=864;mismatches=2;indels=2;unknowns=0;Target=comp147968_c0_seq1 867 1 .;CDS_Target=comp147968_c0_seq1 773 618 .;locus=RLOC_00010012
Chr1	stalkie_big_nohaplotig	exon	107428688	107429554	99	+	.	Parent=comp147968_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	107429305	107429460	.	+	0	Parent=comp147968_c0_seq1.mrna1
Chr1	gffcl	locus	107460223	107461315	.	-	.	ID=RLOC_00010013;geneIDs=comp77786_c0_seq1.path1;transcripts=comp77786_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107460223	107461315	.	-	.	ID=comp77786_c0_seq1.mrna1;geneID=comp77786_c0_seq1.path1;Name=comp77786_c0_seq1;Dir=antisensecoverage=99.9;identity=99.7;matches=752;mismatches=2;indels=0;unknowns=0;Target=comp77786_c0_seq1 222 305 .;locus=RLOC_00010013
Chr1	stalkie_big_nohaplotig	exon	107460223	107460727	99	-	.	Parent=comp77786_c0_seq1.mrna1;Target=comp77786_c0_seq1 2 506 -
Chr1	stalkie_big_nohaplotig	exon	107461067	107461315	99	-	.	Parent=comp77786_c0_seq1.mrna1;Target=comp77786_c0_seq1 507 755 -
Chr1	stalkie_big_nohaplotig	CDS	107460443	107460526	.	-	0	Parent=comp77786_c0_seq1.mrna1
Chr1	gffcl	locus	107464319	107497658	.	.	.	ID=RLOC_00010014;geneIDs=FBgn0028341.1.path1,comp151351_c1_seq1.path1;transcripts=FBgn0028341.1.mrna1,comp151351_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107464319	107497658	.	+	.	ID=FBgn0028341.1.mrna1;geneID=FBgn0028341.1.path1;Name=FBgn0028341.1;Dir=sensecoverage=93.7;identity=99.9;matches=2050;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010014
Chr1	stalkie_big_nohaplotig	exon	107464319	107464540	100	+	.	Parent=FBgn0028341.1.mrna1;Target=FBgn0028341.1 139 360 +
Chr1	stalkie_big_nohaplotig	exon	107464627	107464857	99	+	.	Parent=FBgn0028341.1.mrna1;Target=FBgn0028341.1 361 591 +
Chr1	stalkie_big_nohaplotig	exon	107493282	107494060	100	+	.	Parent=FBgn0028341.1.mrna1;Target=FBgn0028341.1 592 1370 +
Chr1	stalkie_big_nohaplotig	exon	107495403	107495560	100	+	.	Parent=FBgn0028341.1.mrna1;Target=FBgn0028341.1 1371 1528 +
Chr1	stalkie_big_nohaplotig	exon	107496846	107497075	100	+	.	Parent=FBgn0028341.1.mrna1;Target=FBgn0028341.1 1529 1758 +
Chr1	stalkie_big_nohaplotig	exon	107497152	107497359	99	+	.	Parent=FBgn0028341.1.mrna1;Target=FBgn0028341.1 1759 1966 +
Chr1	stalkie_big_nohaplotig	exon	107497435	107497658	100	+	.	Parent=FBgn0028341.1.mrna1;Target=FBgn0028341.1 1967 2190 +
Chr1	stalkie_big_nohaplotig	CDS	107464319	107464540	.	+	0	Parent=FBgn0028341.1.mrna1;Target=FBgn0028341.1 139 360 +
Chr1	stalkie_big_nohaplotig	CDS	107464627	107464857	.	+	0	Parent=FBgn0028341.1.mrna1;Target=FBgn0028341.1 361 591 +
Chr1	stalkie_big_nohaplotig	CDS	107493282	107494060	.	+	0	Parent=FBgn0028341.1.mrna1;Target=FBgn0028341.1 592 1370 +
Chr1	stalkie_big_nohaplotig	CDS	107495403	107495560	.	+	1	Parent=FBgn0028341.1.mrna1;Target=FBgn0028341.1 1371 1528 +
Chr1	stalkie_big_nohaplotig	CDS	107496846	107497075	.	+	2	Parent=FBgn0028341.1.mrna1;Target=FBgn0028341.1 1529 1758 +
Chr1	stalkie_big_nohaplotig	CDS	107497152	107497359	.	+	0	Parent=FBgn0028341.1.mrna1;Target=FBgn0028341.1 1759 1966 +
Chr1	stalkie_big_nohaplotig	CDS	107497435	107497658	.	+	2	Parent=FBgn0028341.1.mrna1;Target=FBgn0028341.1 1967 2190 +
Chr1	stalkie_big_nohaplotig	mRNA	107495540	107496569	.	-	.	ID=comp151351_c1_seq1.mrna1;geneID=comp151351_c1_seq1.path1;Name=comp151351_c1_seq1;Dir=indeterminatecoverage=100.0;identity=96.2;matches=999;mismatches=5;indels=35;unknowns=0;Target=comp151351_c1_seq1 1013 1 .;CDS_Target=comp151351_c1_seq1 511 371 .;locus=RLOC_00010014
Chr1	stalkie_big_nohaplotig	exon	107495540	107496569	96	-	.	Parent=comp151351_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	107496060	107496200	.	-	0	Parent=comp151351_c1_seq1.mrna1
Chr1	gffcl	locus	107498842	107499417	.	+	.	ID=RLOC_00010015;geneIDs=comp135624_c0_seq1.path1;transcripts=comp135624_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107498842	107499417	.	+	.	ID=comp135624_c0_seq1.mrna1;geneID=comp135624_c0_seq1.path1;Name=comp135624_c0_seq1;Dir=indeterminatecoverage=95.7;identity=99.5;matches=573;mismatches=3;indels=0;unknowns=0;Target=comp135624_c0_seq1 578 3 .;CDS_Target=comp135624_c0_seq1 194 126 .;locus=RLOC_00010015
Chr1	stalkie_big_nohaplotig	exon	107498842	107499417	99	+	.	Parent=comp135624_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	107498965	107499033	.	+	0	Parent=comp135624_c0_seq1.mrna1
Chr1	gffcl	locus	107499419	107500813	.	+	.	ID=RLOC_00010016;geneIDs=comp154435_c0_seq1.path1;transcripts=comp154435_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107499419	107500813	.	+	.	ID=comp154435_c0_seq1.mrna1;geneID=comp154435_c0_seq1.path1;Name=comp154435_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.7;matches=1391;mismatches=4;indels=0;unknowns=0;Target=comp154435_c0_seq1 1395 1 .;CDS_Target=comp154435_c0_seq1 1393 1202 .;locus=RLOC_00010016
Chr1	stalkie_big_nohaplotig	exon	107499419	107500813	99	+	.	Parent=comp154435_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	107500620	107500811	.	+	0	Parent=comp154435_c0_seq1.mrna1
Chr1	gffcl	locus	107501772	107503486	.	-	.	ID=RLOC_00010017;geneIDs=FBgn0250874.1.path1;transcripts=FBgn0250874.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107501772	107503486	.	-	.	ID=FBgn0250874.1.mrna1;geneID=FBgn0250874.1.path1;Name=FBgn0250874.1;Dir=sensecoverage=100.0;identity=99.8;matches=1228;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010017
Chr1	stalkie_big_nohaplotig	exon	107501772	107501968	99	-	.	Parent=FBgn0250874.1.mrna1;Target=FBgn0250874.1 1034 1230 +
Chr1	stalkie_big_nohaplotig	exon	107502027	107502150	100	-	.	Parent=FBgn0250874.1.mrna1;Target=FBgn0250874.1 910 1033 +
Chr1	stalkie_big_nohaplotig	exon	107502460	107502988	100	-	.	Parent=FBgn0250874.1.mrna1;Target=FBgn0250874.1 381 909 +
Chr1	stalkie_big_nohaplotig	exon	107503053	107503200	99	-	.	Parent=FBgn0250874.1.mrna1;Target=FBgn0250874.1 233 380 +
Chr1	stalkie_big_nohaplotig	exon	107503255	107503486	100	-	.	Parent=FBgn0250874.1.mrna1;Target=FBgn0250874.1 1 232 +
Chr1	stalkie_big_nohaplotig	CDS	107501772	107501968	.	-	2	Parent=FBgn0250874.1.mrna1;Target=FBgn0250874.1 1034 1230 +
Chr1	stalkie_big_nohaplotig	CDS	107502027	107502150	.	-	0	Parent=FBgn0250874.1.mrna1;Target=FBgn0250874.1 910 1033 +
Chr1	stalkie_big_nohaplotig	CDS	107502460	107502988	.	-	1	Parent=FBgn0250874.1.mrna1;Target=FBgn0250874.1 381 909 +
Chr1	stalkie_big_nohaplotig	CDS	107503053	107503200	.	-	2	Parent=FBgn0250874.1.mrna1;Target=FBgn0250874.1 233 380 +
Chr1	stalkie_big_nohaplotig	CDS	107503255	107503486	.	-	0	Parent=FBgn0250874.1.mrna1;Target=FBgn0250874.1 1 232 +
Chr1	gffcl	locus	107508274	107509163	.	+	.	ID=RLOC_00010018;geneIDs=comp152230_c0_seq1.path1;transcripts=comp152230_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107508274	107509163	.	+	.	ID=comp152230_c0_seq1.mrna1;geneID=comp152230_c0_seq1.path1;Name=comp152230_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.3;matches=879;mismatches=11;indels=83;unknowns=0;Target=comp152230_c0_seq1 973 1 .;CDS_Target=comp152230_c0_seq1 778 608 .;locus=RLOC_00010018
Chr1	stalkie_big_nohaplotig	exon	107508274	107509163	90	+	.	Parent=comp152230_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	107508849	107508968	.	+	0	Parent=comp152230_c0_seq1.mrna1
Chr1	gffcl	locus	107509733	107510572	.	+	.	ID=RLOC_00010019;geneIDs=FBgn0030050.5.path1;transcripts=FBgn0030050.5.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107509733	107510572	.	+	.	ID=FBgn0030050.5.mrna1;geneID=FBgn0030050.5.path1;Name=FBgn0030050.5;Dir=sensecoverage=100.0;identity=99.8;matches=512;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010019
Chr1	stalkie_big_nohaplotig	exon	107509733	107509814	100	+	.	Parent=FBgn0030050.5.mrna1;Target=FBgn0030050.5 1 82 +
Chr1	stalkie_big_nohaplotig	exon	107510065	107510138	100	+	.	Parent=FBgn0030050.5.mrna1;Target=FBgn0030050.5 83 156 +
Chr1	stalkie_big_nohaplotig	exon	107510216	107510572	99	+	.	Parent=FBgn0030050.5.mrna1;Target=FBgn0030050.5 157 513 +
Chr1	stalkie_big_nohaplotig	CDS	107509733	107509814	.	+	0	Parent=FBgn0030050.5.mrna1;Target=FBgn0030050.5 1 82 +
Chr1	stalkie_big_nohaplotig	CDS	107510065	107510138	.	+	2	Parent=FBgn0030050.5.mrna1;Target=FBgn0030050.5 83 156 +
Chr1	stalkie_big_nohaplotig	CDS	107510216	107510572	.	+	0	Parent=FBgn0030050.5.mrna1;Target=FBgn0030050.5 157 513 +
Chr1	gffcl	locus	107513638	107514183	.	+	.	ID=RLOC_00010020;geneIDs=comp135491_c0_seq1.path1;transcripts=comp135491_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107513638	107514183	.	+	.	ID=comp135491_c0_seq1.mrna1;geneID=comp135491_c0_seq1.path1;Name=comp135491_c0_seq1;Dir=indeterminatecoverage=95.3;identity=98.9;matches=544;mismatches=2;indels=4;unknowns=0;Target=comp135491_c0_seq1 577 28 .;CDS_Target=comp135491_c0_seq1 116 30 .;locus=RLOC_00010020
Chr1	stalkie_big_nohaplotig	exon	107513638	107514183	98	+	.	Parent=comp135491_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	107513640	107513726	.	+	0	Parent=comp135491_c0_seq1.mrna1
Chr1	gffcl	locus	107596222	107597406	.	+	.	ID=RLOC_00010021;geneIDs=comp147494_c0_seq1.path1;transcripts=comp147494_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107596222	107597406	.	+	.	ID=comp147494_c0_seq1.mrna1;geneID=comp147494_c0_seq1.path1;Name=comp147494_c0_seq1;Dir=antisensecoverage=99.2;identity=95.0;matches=1036;mismatches=31;indels=24;unknowns=0;Target=comp147494_c0_seq1 153 305 .;locus=RLOC_00010021
Chr1	stalkie_big_nohaplotig	exon	107596222	107596361	85	+	.	Parent=comp147494_c0_seq1.mrna1;Target=comp147494_c0_seq1 928 1067 -
Chr1	stalkie_big_nohaplotig	exon	107596456	107597406	96	+	.	Parent=comp147494_c0_seq1.mrna1;Target=comp147494_c0_seq1 1 927 -
Chr1	stalkie_big_nohaplotig	CDS	107597102	107597254	.	+	0	Parent=comp147494_c0_seq1.mrna1
Chr1	gffcl	locus	107642301	107642808	.	+	.	ID=RLOC_00010022;geneIDs=comp69522_c0_seq1.path1;transcripts=comp69522_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107642301	107642808	.	+	.	ID=comp69522_c0_seq1.mrna1;geneID=comp69522_c0_seq1.path1;Name=comp69522_c0_seq1;Dir=antisensecoverage=99.8;identity=99.3;matches=443;mismatches=3;indels=0;unknowns=0;Target=comp69522_c0_seq1 76 150 .;locus=RLOC_00010022
Chr1	stalkie_big_nohaplotig	exon	107642301	107642423	100	+	.	Parent=comp69522_c0_seq1.mrna1;Target=comp69522_c0_seq1 324 446 -
Chr1	stalkie_big_nohaplotig	exon	107642486	107642808	99	+	.	Parent=comp69522_c0_seq1.mrna1;Target=comp69522_c0_seq1 1 323 -
Chr1	stalkie_big_nohaplotig	CDS	107642659	107642733	.	+	0	Parent=comp69522_c0_seq1.mrna1
Chr1	gffcl	locus	107687377	107687927	.	+	.	ID=RLOC_00010023;geneIDs=comp148667_c0_seq1.path1;transcripts=comp148667_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107687377	107687927	.	+	.	ID=comp148667_c0_seq1.mrna1;geneID=comp148667_c0_seq1.path1;Name=comp148667_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=543;mismatches=8;indels=2;unknowns=0;Target=comp148667_c0_seq1 553 1 .;CDS_Target=comp148667_c0_seq1 87 1 .;locus=RLOC_00010023
Chr1	stalkie_big_nohaplotig	exon	107687377	107687927	98	+	.	Parent=comp148667_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	107687377	107687463	.	+	0	Parent=comp148667_c0_seq1.mrna1
Chr1	gffcl	locus	107731621	107757502	.	+	.	ID=RLOC_00010024;geneIDs=FBgn0040207.1.path1;transcripts=FBgn0040207.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107731621	107757502	.	+	.	ID=FBgn0040207.1.mrna1;geneID=FBgn0040207.1.path1;Name=FBgn0040207.1;Dir=sensecoverage=100.0;identity=99.7;matches=2578;mismatches=8;indels=0;unknowns=0;locus=RLOC_00010024
Chr1	stalkie_big_nohaplotig	exon	107731621	107731681	100	+	.	Parent=FBgn0040207.1.mrna1;Target=FBgn0040207.1 1 61 +
Chr1	stalkie_big_nohaplotig	exon	107732351	107732478	100	+	.	Parent=FBgn0040207.1.mrna1;Target=FBgn0040207.1 62 189 +
Chr1	stalkie_big_nohaplotig	exon	107732584	107732801	100	+	.	Parent=FBgn0040207.1.mrna1;Target=FBgn0040207.1 190 407 +
Chr1	stalkie_big_nohaplotig	exon	107751195	107751545	99	+	.	Parent=FBgn0040207.1.mrna1;Target=FBgn0040207.1 408 758 +
Chr1	stalkie_big_nohaplotig	exon	107751612	107751747	100	+	.	Parent=FBgn0040207.1.mrna1;Target=FBgn0040207.1 759 894 +
Chr1	stalkie_big_nohaplotig	exon	107751821	107752921	99	+	.	Parent=FBgn0040207.1.mrna1;Target=FBgn0040207.1 895 1995 +
Chr1	stalkie_big_nohaplotig	exon	107754666	107754853	99	+	.	Parent=FBgn0040207.1.mrna1;Target=FBgn0040207.1 1996 2183 +
Chr1	stalkie_big_nohaplotig	exon	107756182	107756274	100	+	.	Parent=FBgn0040207.1.mrna1;Target=FBgn0040207.1 2184 2276 +
Chr1	stalkie_big_nohaplotig	exon	107756338	107756412	100	+	.	Parent=FBgn0040207.1.mrna1;Target=FBgn0040207.1 2277 2351 +
Chr1	stalkie_big_nohaplotig	exon	107757268	107757502	99	+	.	Parent=FBgn0040207.1.mrna1;Target=FBgn0040207.1 2352 2586 +
Chr1	stalkie_big_nohaplotig	CDS	107731621	107731681	.	+	0	Parent=FBgn0040207.1.mrna1;Target=FBgn0040207.1 1 61 +
Chr1	stalkie_big_nohaplotig	CDS	107732351	107732478	.	+	2	Parent=FBgn0040207.1.mrna1;Target=FBgn0040207.1 62 189 +
Chr1	stalkie_big_nohaplotig	CDS	107732584	107732801	.	+	0	Parent=FBgn0040207.1.mrna1;Target=FBgn0040207.1 190 407 +
Chr1	stalkie_big_nohaplotig	CDS	107751195	107751545	.	+	1	Parent=FBgn0040207.1.mrna1;Target=FBgn0040207.1 408 758 +
Chr1	stalkie_big_nohaplotig	CDS	107751612	107751747	.	+	1	Parent=FBgn0040207.1.mrna1;Target=FBgn0040207.1 759 894 +
Chr1	stalkie_big_nohaplotig	CDS	107751821	107752921	.	+	0	Parent=FBgn0040207.1.mrna1;Target=FBgn0040207.1 895 1995 +
Chr1	stalkie_big_nohaplotig	CDS	107754666	107754853	.	+	0	Parent=FBgn0040207.1.mrna1;Target=FBgn0040207.1 1996 2183 +
Chr1	stalkie_big_nohaplotig	CDS	107756182	107756274	.	+	1	Parent=FBgn0040207.1.mrna1;Target=FBgn0040207.1 2184 2276 +
Chr1	stalkie_big_nohaplotig	CDS	107756338	107756412	.	+	1	Parent=FBgn0040207.1.mrna1;Target=FBgn0040207.1 2277 2351 +
Chr1	stalkie_big_nohaplotig	CDS	107757268	107757502	.	+	1	Parent=FBgn0040207.1.mrna1;Target=FBgn0040207.1 2352 2586 +
Chr1	gffcl	locus	107743131	107745009	.	-	.	ID=RLOC_00010025;geneIDs=FBgn0030731.2.path1;transcripts=FBgn0030731.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107743131	107745009	.	-	.	ID=FBgn0030731.2.mrna1;geneID=FBgn0030731.2.path1;Name=FBgn0030731.2;Dir=sensecoverage=100.0;identity=100.0;matches=1827;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010025
Chr1	stalkie_big_nohaplotig	exon	107743131	107744212	100	-	.	Parent=FBgn0030731.2.mrna1;Target=FBgn0030731.2 746 1827 +
Chr1	stalkie_big_nohaplotig	exon	107744265	107745009	100	-	.	Parent=FBgn0030731.2.mrna1;Target=FBgn0030731.2 1 745 +
Chr1	stalkie_big_nohaplotig	CDS	107743131	107744212	.	-	2	Parent=FBgn0030731.2.mrna1;Target=FBgn0030731.2 746 1827 +
Chr1	stalkie_big_nohaplotig	CDS	107744265	107745009	.	-	0	Parent=FBgn0030731.2.mrna1;Target=FBgn0030731.2 1 745 +
Chr1	gffcl	locus	107745922	107747798	.	-	.	ID=RLOC_00010026;geneIDs=FBgn0030731.1.path1;transcripts=FBgn0030731.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107745922	107747798	.	-	.	ID=FBgn0030731.1.mrna1;geneID=FBgn0030731.1.path1;Name=FBgn0030731.1;Dir=sensecoverage=100.0;identity=99.9;matches=1820;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010026
Chr1	stalkie_big_nohaplotig	exon	107745922	107747006	100	-	.	Parent=FBgn0030731.1.mrna1;Target=FBgn0030731.1 737 1821 +
Chr1	stalkie_big_nohaplotig	exon	107747063	107747798	99	-	.	Parent=FBgn0030731.1.mrna1;Target=FBgn0030731.1 1 736 +
Chr1	stalkie_big_nohaplotig	CDS	107745922	107747006	.	-	2	Parent=FBgn0030731.1.mrna1;Target=FBgn0030731.1 737 1821 +
Chr1	stalkie_big_nohaplotig	CDS	107747063	107747798	.	-	0	Parent=FBgn0030731.1.mrna1;Target=FBgn0030731.1 1 736 +
Chr1	gffcl	locus	107780144	107781998	.	-	.	ID=RLOC_00010027;geneIDs=comp160482_c2_seq1.path1;transcripts=comp160482_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107780144	107781998	.	-	.	ID=comp160482_c2_seq1.mrna1;geneID=comp160482_c2_seq1.path1;Name=comp160482_c2_seq1;Dir=indeterminatecoverage=77.2;identity=90.2;matches=266;mismatches=15;indels=14;unknowns=0;locus=RLOC_00010027
Chr1	stalkie_big_nohaplotig	exon	107780144	107780208	87	-	.	Parent=comp160482_c2_seq1.mrna1;Target=comp160482_c2_seq1 305 241 .
Chr1	stalkie_big_nohaplotig	exon	107781783	107781998	90	-	.	Parent=comp160482_c2_seq1.mrna1;Target=comp160482_c2_seq1 230 1 .
Chr1	stalkie_big_nohaplotig	CDS	107780158	107780208	.	-	1	Parent=comp160482_c2_seq1.mrna1;Target=comp160482_c2_seq1 291 241 .
Chr1	stalkie_big_nohaplotig	CDS	107781783	107781817	.	-	0	Parent=comp160482_c2_seq1.mrna1;Target=comp160482_c2_seq1 230 196 .
Chr1	gffcl	locus	107785317	107788527	.	+	.	ID=RLOC_00010028;geneIDs=comp163678_c0_seq1.path3;transcripts=comp163678_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	107785317	107788527	.	+	.	ID=comp163678_c0_seq1.mrna3;geneID=comp163678_c0_seq1.path3;Name=comp163678_c0_seq1;Dir=antisensecoverage=100.0;identity=96.3;matches=776;mismatches=24;indels=6;unknowns=0;locus=RLOC_00010028
Chr1	stalkie_big_nohaplotig	exon	107785317	107785578	97	+	.	Parent=comp163678_c0_seq1.mrna3;Target=comp163678_c0_seq1 541 802 -
Chr1	stalkie_big_nohaplotig	exon	107786889	107787013	94	+	.	Parent=comp163678_c0_seq1.mrna3;Target=comp163678_c0_seq1 415 540 -
Chr1	stalkie_big_nohaplotig	exon	107787080	107787229	94	+	.	Parent=comp163678_c0_seq1.mrna3;Target=comp163678_c0_seq1 265 414 -
Chr1	stalkie_big_nohaplotig	exon	107788261	107788527	97	+	.	Parent=comp163678_c0_seq1.mrna3;Target=comp163678_c0_seq1 1 264 -
Chr1	stalkie_big_nohaplotig	CDS	107785488	107785578	.	+	0	Parent=comp163678_c0_seq1.mrna3;Target=comp163678_c0_seq1 541 631 .
Chr1	stalkie_big_nohaplotig	CDS	107786889	107786928	.	+	2	Parent=comp163678_c0_seq1.mrna3;Target=comp163678_c0_seq1 500 540 .
Chr1	gffcl	locus	107900089	107900882	.	+	.	ID=RLOC_00010029;geneIDs=comp137899_c0_seq1.path1;transcripts=comp137899_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107900089	107900882	.	+	.	ID=comp137899_c0_seq1.mrna1;geneID=comp137899_c0_seq1.path1;Name=comp137899_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=794;mismatches=0;indels=0;unknowns=0;Target=comp137899_c0_seq1 795 2 .;CDS_Target=comp137899_c0_seq1 368 120 .;locus=RLOC_00010029
Chr1	stalkie_big_nohaplotig	exon	107900089	107900882	100	+	.	Parent=comp137899_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	107900207	107900455	.	+	0	Parent=comp137899_c0_seq1.mrna1
Chr1	gffcl	locus	107918501	107919641	.	+	.	ID=RLOC_00010030;geneIDs=comp159444_c3_seq1.path1;transcripts=comp159444_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	107918501	107919641	.	+	.	ID=comp159444_c3_seq1.mrna1;geneID=comp159444_c3_seq1.path1;Name=comp159444_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1136;mismatches=5;indels=0;unknowns=0;Target=comp159444_c3_seq1 1141 1 .;CDS_Target=comp159444_c3_seq1 542 354 .;locus=RLOC_00010030
Chr1	stalkie_big_nohaplotig	exon	107918501	107919641	99	+	.	Parent=comp159444_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	107918854	107919042	.	+	0	Parent=comp159444_c3_seq1.mrna1
Chr1	gffcl	locus	108058362	108059903	.	+	.	ID=RLOC_00010032;geneIDs=FBgn0024975.1.path1;transcripts=FBgn0024975.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108058362	108059903	.	+	.	ID=FBgn0024975.1.mrna1;geneID=FBgn0024975.1.path1;Name=FBgn0024975.1;Dir=sensecoverage=100.0;identity=99.9;matches=1475;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010032
Chr1	stalkie_big_nohaplotig	exon	108058362	108059204	99	+	.	Parent=FBgn0024975.1.mrna1;Target=FBgn0024975.1 1 843 +
Chr1	stalkie_big_nohaplotig	exon	108059271	108059903	100	+	.	Parent=FBgn0024975.1.mrna1;Target=FBgn0024975.1 844 1476 +
Chr1	stalkie_big_nohaplotig	CDS	108058362	108059204	.	+	0	Parent=FBgn0024975.1.mrna1;Target=FBgn0024975.1 1 843 +
Chr1	stalkie_big_nohaplotig	CDS	108059271	108059903	.	+	0	Parent=FBgn0024975.1.mrna1;Target=FBgn0024975.1 844 1476 +
Chr1	gffcl	locus	108060642	108061162	.	-	.	ID=RLOC_00010033;geneIDs=comp858248_c0_seq1.path1;transcripts=comp858248_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108060642	108061162	.	-	.	ID=comp858248_c0_seq1.mrna1;geneID=comp858248_c0_seq1.path1;Name=comp858248_c0_seq1;Dir=indeterminatecoverage=97.7;identity=100.0;matches=521;mismatches=0;indels=0;unknowns=0;Target=comp858248_c0_seq1 533 13 .;CDS_Target=comp858248_c0_seq1 216 145 .;locus=RLOC_00010033
Chr1	stalkie_big_nohaplotig	exon	108060642	108061162	100	-	.	Parent=comp858248_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	108060959	108061030	.	-	0	Parent=comp858248_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108063873	108064182	.	-	.	ID=comp144824_c0_seq1.mrna1;geneID=comp144824_c0_seq1.path1;Name=comp144824_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.7;matches=309;mismatches=1;indels=27;unknowns=0;Target=comp144824_c0_seq1 337 1 .;CDS_Target=comp144824_c0_seq1 273 79 .;locus=RLOC_00010034
Chr1	stalkie_big_nohaplotig	exon	108063873	108064182	91	-	.	Parent=comp144824_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	108063937	108064104	.	-	0	Parent=comp144824_c0_seq1.mrna1
Chr1	gffcl	locus	108071438	108076052	.	.	.	ID=RLOC_00010035;geneIDs=FBgn0259699.1.path1,comp148118_c0_seq1.path1;transcripts=FBgn0259699.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108072119	108076052	.	-	.	ID=FBgn0259699.1.mrna1;geneID=FBgn0259699.1.path1;Name=FBgn0259699.1;Dir=indeterminatecoverage=99.7;identity=99.8;matches=3925;mismatches=9;indels=0;unknowns=0;Target=FBgn0259699.1 3934 1 .;CDS_Target=FBgn0259699.1 3933 1 .;locus=RLOC_00010035
Chr1	stalkie_big_nohaplotig	exon	108072119	108076052	99	-	.	Parent=FBgn0259699.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	108072120	108076052	.	-	0	Parent=FBgn0259699.1.mrna1
Chr1	gffcl	locus	108138043	108139479	.	-	.	ID=RLOC_00010036;geneIDs=FBgn0000459.1.path1;transcripts=FBgn0000459.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108138043	108139479	.	-	.	ID=FBgn0000459.1.mrna1;geneID=FBgn0000459.1.path1;Name=FBgn0000459.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1437;mismatches=0;indels=0;unknowns=0;Target=FBgn0000459.1 1437 1 .;locus=RLOC_00010036
Chr1	stalkie_big_nohaplotig	exon	108138043	108139479	100	-	.	Parent=FBgn0000459.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	108138043	108139479	.	-	0	Parent=FBgn0000459.1.mrna1
Chr1	gffcl	locus	108226076	108229310	.	-	.	ID=RLOC_00010038;geneIDs=comp146536_c0_seq1.path1;transcripts=comp146536_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108226076	108229310	.	-	.	ID=comp146536_c0_seq1.mrna1;geneID=comp146536_c0_seq1.path1;Name=comp146536_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=2112;mismatches=12;indels=2;unknowns=0;Target=comp146536_c0_seq1 1175 1408 +;locus=RLOC_00010038
Chr1	stalkie_big_nohaplotig	exon	108226076	108227461	99	-	.	Parent=comp146536_c0_seq1.mrna1;Target=comp146536_c0_seq1 739 2126 +
Chr1	stalkie_big_nohaplotig	exon	108228506	108228676	100	-	.	Parent=comp146536_c0_seq1.mrna1;Target=comp146536_c0_seq1 568 738 +
Chr1	stalkie_big_nohaplotig	exon	108228744	108229310	98	-	.	Parent=comp146536_c0_seq1.mrna1;Target=comp146536_c0_seq1 1 567 +
Chr1	stalkie_big_nohaplotig	CDS	108226794	108227025	.	-	0	Parent=comp146536_c0_seq1.mrna1
Chr1	gffcl	locus	108251012	108252589	.	-	.	ID=RLOC_00010039;geneIDs=comp157262_c0_seq1.path1;transcripts=comp157262_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108251012	108252589	.	-	.	ID=comp157262_c0_seq1.mrna1;geneID=comp157262_c0_seq1.path1;Name=comp157262_c0_seq1;Dir=antisensecoverage=91.5;identity=92.3;matches=1488;mismatches=34;indels=90;unknowns=0;Target=comp157262_c0_seq1 587 745 .;locus=RLOC_00010039
Chr1	stalkie_big_nohaplotig	exon	108251012	108251376	99	-	.	Parent=comp157262_c0_seq1.mrna1;Target=comp157262_c0_seq1 1 365 -
Chr1	stalkie_big_nohaplotig	exon	108251432	108252589	90	-	.	Parent=comp157262_c0_seq1.mrna1;Target=comp157262_c0_seq1 366 1611 -
Chr1	stalkie_big_nohaplotig	CDS	108251653	108251811	.	-	0	Parent=comp157262_c0_seq1.mrna1
Chr1	gffcl	locus	108276817	108278162	.	-	.	ID=RLOC_00010040;geneIDs=FBgn0030729.1.path1;transcripts=FBgn0030729.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108276817	108278162	.	-	.	ID=FBgn0030729.1.mrna1;geneID=FBgn0030729.1.path1;Name=FBgn0030729.1;Dir=sensecoverage=100.0;identity=99.2;matches=1280;mismatches=10;indels=0;unknowns=0;locus=RLOC_00010040
Chr1	stalkie_big_nohaplotig	exon	108276817	108277372	99	-	.	Parent=FBgn0030729.1.mrna1;Target=FBgn0030729.1 735 1290 +
Chr1	stalkie_big_nohaplotig	exon	108277429	108278162	99	-	.	Parent=FBgn0030729.1.mrna1;Target=FBgn0030729.1 1 734 +
Chr1	stalkie_big_nohaplotig	CDS	108276817	108277372	.	-	1	Parent=FBgn0030729.1.mrna1;Target=FBgn0030729.1 735 1290 +
Chr1	stalkie_big_nohaplotig	CDS	108277429	108278162	.	-	0	Parent=FBgn0030729.1.mrna1;Target=FBgn0030729.1 1 734 +
Chr1	gffcl	locus	108288204	108291442	.	-	.	ID=RLOC_00010041;geneIDs=CPIJ005553.1.path1,comp163621_c1_seq1.path1;transcripts=comp163621_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108288204	108291442	.	-	.	ID=comp163621_c1_seq1.mrna1;geneID=comp163621_c1_seq1.path1;Name=comp163621_c1_seq1;Dir=sensecoverage=89.6;identity=99.4;matches=2662;mismatches=13;indels=3;unknowns=0;locus=RLOC_00010041
Chr1	stalkie_big_nohaplotig	exon	108288204	108289019	99	-	.	Parent=comp163621_c1_seq1.mrna1;Target=comp163621_c1_seq1 1951 2766 +
Chr1	stalkie_big_nohaplotig	exon	108289080	108290251	100	-	.	Parent=comp163621_c1_seq1.mrna1;Target=comp163621_c1_seq1 779 1950 +
Chr1	stalkie_big_nohaplotig	exon	108290692	108291008	100	-	.	Parent=comp163621_c1_seq1.mrna1;Target=comp163621_c1_seq1 462 778 +
Chr1	stalkie_big_nohaplotig	exon	108291071	108291442	96	-	.	Parent=comp163621_c1_seq1.mrna1;Target=comp163621_c1_seq1 91 461 +
Chr1	stalkie_big_nohaplotig	CDS	108288863	108289019	.	-	1	Parent=comp163621_c1_seq1.mrna1;Target=comp163621_c1_seq1 1951 2107 +
Chr1	stalkie_big_nohaplotig	CDS	108289080	108290251	.	-	0	Parent=comp163621_c1_seq1.mrna1;Target=comp163621_c1_seq1 779 1950 +
Chr1	stalkie_big_nohaplotig	CDS	108290692	108291008	.	-	2	Parent=comp163621_c1_seq1.mrna1;Target=comp163621_c1_seq1 462 778 +
Chr1	stalkie_big_nohaplotig	CDS	108291071	108291281	.	-	0	Parent=comp163621_c1_seq1.mrna1;Target=comp163621_c1_seq1 251 461 +
Chr1	gffcl	locus	108294170	108348208	.	-	.	ID=RLOC_00010042;geneIDs=FBgn0259680.1.path1,comp151392_c0_seq1.path1;transcripts=comp151392_c0_seq1.mrna1,FBgn0259680.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108294170	108348208	.	-	.	ID=comp151392_c0_seq1.mrna1;geneID=comp151392_c0_seq1.path1;Name=comp151392_c0_seq1;Dir=antisensecoverage=89.2;identity=96.9;matches=756;mismatches=8;indels=16;unknowns=0;Target=comp151392_c0_seq1 575 724 .;locus=RLOC_00010042
Chr1	stalkie_big_nohaplotig	exon	108294170	108294180	100	-	.	Parent=comp151392_c0_seq1.mrna1;Target=comp151392_c0_seq1 95 105 -
Chr1	stalkie_big_nohaplotig	exon	108299227	108299234	100	-	.	Parent=comp151392_c0_seq1.mrna1;Target=comp151392_c0_seq1 106 113 -
Chr1	stalkie_big_nohaplotig	exon	108307482	108307501	50	-	.	Parent=comp151392_c0_seq1.mrna1;Target=comp151392_c0_seq1 114 145 -
Chr1	stalkie_big_nohaplotig	exon	108307947	108307978	78	-	.	Parent=comp151392_c0_seq1.mrna1;Target=comp151392_c0_seq1 146 173 -
Chr1	stalkie_big_nohaplotig	exon	108309873	108309879	100	-	.	Parent=comp151392_c0_seq1.mrna1;Target=comp151392_c0_seq1 174 180 -
Chr1	stalkie_big_nohaplotig	exon	108312443	108312451	100	-	.	Parent=comp151392_c0_seq1.mrna1;Target=comp151392_c0_seq1 181 189 -
Chr1	stalkie_big_nohaplotig	exon	108321956	108321963	100	-	.	Parent=comp151392_c0_seq1.mrna1;Target=comp151392_c0_seq1 190 197 -
Chr1	stalkie_big_nohaplotig	exon	108323884	108323886	100	-	.	Parent=comp151392_c0_seq1.mrna1;Target=comp151392_c0_seq1 198 200 -
Chr1	stalkie_big_nohaplotig	exon	108340120	108340128	100	-	.	Parent=comp151392_c0_seq1.mrna1;Target=comp151392_c0_seq1 201 209 -
Chr1	stalkie_big_nohaplotig	exon	108344440	108344516	100	-	.	Parent=comp151392_c0_seq1.mrna1;Target=comp151392_c0_seq1 210 286 -
Chr1	stalkie_big_nohaplotig	exon	108347625	108348208	99	-	.	Parent=comp151392_c0_seq1.mrna1;Target=comp151392_c0_seq1 287 870 -
Chr1	stalkie_big_nohaplotig	CDS	108347913	108348062	.	-	0	Parent=comp151392_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108339916	108343805	.	-	.	ID=FBgn0259680.1.mrna1;geneID=FBgn0259680.1.path1;Name=FBgn0259680.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=3735;mismatches=8;indels=7;unknowns=0;locus=RLOC_00010042
Chr1	stalkie_big_nohaplotig	exon	108339916	108342031	99	-	.	Parent=FBgn0259680.1.mrna1;Target=FBgn0259680.1 3750 1628 .
Chr1	stalkie_big_nohaplotig	exon	108342179	108343805	99	-	.	Parent=FBgn0259680.1.mrna1;Target=FBgn0259680.1 1627 1 .
Chr1	stalkie_big_nohaplotig	CDS	108339916	108342031	.	-	2	Parent=FBgn0259680.1.mrna1;Target=FBgn0259680.1 3750 1628 .
Chr1	stalkie_big_nohaplotig	CDS	108342179	108343805	.	-	0	Parent=FBgn0259680.1.mrna1;Target=FBgn0259680.1 1627 1 .
Chr1	gffcl	locus	108294307	108296626	.	+	.	ID=RLOC_00010043;geneIDs=FBgn0036659.2.path1;transcripts=FBgn0036659.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108294307	108296626	.	+	.	ID=FBgn0036659.2.mrna1;geneID=FBgn0036659.2.path1;Name=FBgn0036659.2;Dir=sensecoverage=100.0;identity=99.4;matches=1574;mismatches=10;indels=0;unknowns=0;locus=RLOC_00010043
Chr1	stalkie_big_nohaplotig	exon	108294307	108294402	97	+	.	Parent=FBgn0036659.2.mrna1;Target=FBgn0036659.2 1 96 +
Chr1	stalkie_big_nohaplotig	exon	108294669	108294971	100	+	.	Parent=FBgn0036659.2.mrna1;Target=FBgn0036659.2 97 399 +
Chr1	stalkie_big_nohaplotig	exon	108295156	108295683	99	+	.	Parent=FBgn0036659.2.mrna1;Target=FBgn0036659.2 400 927 +
Chr1	stalkie_big_nohaplotig	exon	108295747	108296081	99	+	.	Parent=FBgn0036659.2.mrna1;Target=FBgn0036659.2 928 1262 +
Chr1	stalkie_big_nohaplotig	exon	108296140	108296242	100	+	.	Parent=FBgn0036659.2.mrna1;Target=FBgn0036659.2 1263 1365 +
Chr1	stalkie_big_nohaplotig	exon	108296350	108296453	99	+	.	Parent=FBgn0036659.2.mrna1;Target=FBgn0036659.2 1366 1469 +
Chr1	stalkie_big_nohaplotig	exon	108296512	108296626	99	+	.	Parent=FBgn0036659.2.mrna1;Target=FBgn0036659.2 1470 1584 +
Chr1	stalkie_big_nohaplotig	CDS	108294307	108294402	.	+	0	Parent=FBgn0036659.2.mrna1;Target=FBgn0036659.2 1 96 +
Chr1	stalkie_big_nohaplotig	CDS	108294669	108294971	.	+	0	Parent=FBgn0036659.2.mrna1;Target=FBgn0036659.2 97 399 +
Chr1	stalkie_big_nohaplotig	CDS	108295156	108295683	.	+	0	Parent=FBgn0036659.2.mrna1;Target=FBgn0036659.2 400 927 +
Chr1	stalkie_big_nohaplotig	CDS	108295747	108296081	.	+	0	Parent=FBgn0036659.2.mrna1;Target=FBgn0036659.2 928 1262 +
Chr1	stalkie_big_nohaplotig	CDS	108296140	108296242	.	+	1	Parent=FBgn0036659.2.mrna1;Target=FBgn0036659.2 1263 1365 +
Chr1	stalkie_big_nohaplotig	CDS	108296350	108296453	.	+	0	Parent=FBgn0036659.2.mrna1;Target=FBgn0036659.2 1366 1469 +
Chr1	stalkie_big_nohaplotig	CDS	108296512	108296626	.	+	1	Parent=FBgn0036659.2.mrna1;Target=FBgn0036659.2 1470 1584 +
Chr1	gffcl	locus	108298878	108303817	.	+	.	ID=RLOC_00010044;geneIDs=FBgn0032934.1.path1;transcripts=FBgn0032934.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108298878	108303817	.	+	.	ID=FBgn0032934.1.mrna1;geneID=FBgn0032934.1.path1;Name=FBgn0032934.1;Dir=sensecoverage=100.0;identity=99.7;matches=2486;mismatches=7;indels=0;unknowns=0;locus=RLOC_00010044
Chr1	stalkie_big_nohaplotig	exon	108298878	108298978	98	+	.	Parent=FBgn0032934.1.mrna1;Target=FBgn0032934.1 1 101 +
Chr1	stalkie_big_nohaplotig	exon	108299056	108299201	100	+	.	Parent=FBgn0032934.1.mrna1;Target=FBgn0032934.1 102 247 +
Chr1	stalkie_big_nohaplotig	exon	108299259	108299347	100	+	.	Parent=FBgn0032934.1.mrna1;Target=FBgn0032934.1 248 336 +
Chr1	stalkie_big_nohaplotig	exon	108299409	108299933	99	+	.	Parent=FBgn0032934.1.mrna1;Target=FBgn0032934.1 337 861 +
Chr1	stalkie_big_nohaplotig	exon	108299999	108300690	99	+	.	Parent=FBgn0032934.1.mrna1;Target=FBgn0032934.1 862 1553 +
Chr1	stalkie_big_nohaplotig	exon	108301012	108301127	98	+	.	Parent=FBgn0032934.1.mrna1;Target=FBgn0032934.1 1554 1669 +
Chr1	stalkie_big_nohaplotig	exon	108302569	108302679	100	+	.	Parent=FBgn0032934.1.mrna1;Target=FBgn0032934.1 1670 1780 +
Chr1	stalkie_big_nohaplotig	exon	108302966	108303171	100	+	.	Parent=FBgn0032934.1.mrna1;Target=FBgn0032934.1 1781 1986 +
Chr1	stalkie_big_nohaplotig	exon	108303245	108303404	100	+	.	Parent=FBgn0032934.1.mrna1;Target=FBgn0032934.1 1987 2146 +
Chr1	stalkie_big_nohaplotig	exon	108303471	108303817	100	+	.	Parent=FBgn0032934.1.mrna1;Target=FBgn0032934.1 2147 2493 +
Chr1	stalkie_big_nohaplotig	CDS	108298878	108298978	.	+	0	Parent=FBgn0032934.1.mrna1;Target=FBgn0032934.1 1 101 +
Chr1	stalkie_big_nohaplotig	CDS	108299056	108299201	.	+	1	Parent=FBgn0032934.1.mrna1;Target=FBgn0032934.1 102 247 +
Chr1	stalkie_big_nohaplotig	CDS	108299259	108299347	.	+	2	Parent=FBgn0032934.1.mrna1;Target=FBgn0032934.1 248 336 +
Chr1	stalkie_big_nohaplotig	CDS	108299409	108299933	.	+	0	Parent=FBgn0032934.1.mrna1;Target=FBgn0032934.1 337 861 +
Chr1	stalkie_big_nohaplotig	CDS	108299999	108300690	.	+	0	Parent=FBgn0032934.1.mrna1;Target=FBgn0032934.1 862 1553 +
Chr1	stalkie_big_nohaplotig	CDS	108301012	108301127	.	+	1	Parent=FBgn0032934.1.mrna1;Target=FBgn0032934.1 1554 1669 +
Chr1	stalkie_big_nohaplotig	CDS	108302569	108302679	.	+	2	Parent=FBgn0032934.1.mrna1;Target=FBgn0032934.1 1670 1780 +
Chr1	stalkie_big_nohaplotig	CDS	108302966	108303171	.	+	2	Parent=FBgn0032934.1.mrna1;Target=FBgn0032934.1 1781 1986 +
Chr1	stalkie_big_nohaplotig	CDS	108303245	108303404	.	+	0	Parent=FBgn0032934.1.mrna1;Target=FBgn0032934.1 1987 2146 +
Chr1	stalkie_big_nohaplotig	CDS	108303471	108303817	.	+	2	Parent=FBgn0032934.1.mrna1;Target=FBgn0032934.1 2147 2493 +
Chr1	gffcl	locus	108305984	108306926	.	-	.	ID=RLOC_00010045;geneIDs=FBgn0004066.1.path1;transcripts=FBgn0004066.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108305984	108306926	.	-	.	ID=FBgn0004066.1.mrna1;geneID=FBgn0004066.1.path1;Name=FBgn0004066.1;Dir=sensecoverage=100.0;identity=100.0;matches=807;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010045
Chr1	stalkie_big_nohaplotig	exon	108305984	108306398	100	-	.	Parent=FBgn0004066.1.mrna1;Target=FBgn0004066.1 393 807 +
Chr1	stalkie_big_nohaplotig	exon	108306462	108306691	100	-	.	Parent=FBgn0004066.1.mrna1;Target=FBgn0004066.1 163 392 +
Chr1	stalkie_big_nohaplotig	exon	108306765	108306926	100	-	.	Parent=FBgn0004066.1.mrna1;Target=FBgn0004066.1 1 162 +
Chr1	stalkie_big_nohaplotig	CDS	108305984	108306398	.	-	1	Parent=FBgn0004066.1.mrna1;Target=FBgn0004066.1 393 807 +
Chr1	stalkie_big_nohaplotig	CDS	108306462	108306691	.	-	0	Parent=FBgn0004066.1.mrna1;Target=FBgn0004066.1 163 392 +
Chr1	stalkie_big_nohaplotig	CDS	108306765	108306926	.	-	0	Parent=FBgn0004066.1.mrna1;Target=FBgn0004066.1 1 162 +
Chr1	gffcl	locus	108373124	108373829	.	-	.	ID=RLOC_00010046;geneIDs=comp109778_c0_seq1.path1;transcripts=comp109778_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108373124	108373829	.	-	.	ID=comp109778_c0_seq1.mrna1;geneID=comp109778_c0_seq1.path1;Name=comp109778_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=706;mismatches=0;indels=1;unknowns=0;Target=comp109778_c0_seq1 707 1 .;CDS_Target=comp109778_c0_seq1 543 436 .;locus=RLOC_00010046
Chr1	stalkie_big_nohaplotig	exon	108373124	108373829	99	-	.	Parent=comp109778_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	108373288	108373395	.	-	0	Parent=comp109778_c0_seq1.mrna1
Chr1	gffcl	locus	108381890	108382796	.	+	.	ID=RLOC_00010047;geneIDs=comp138998_c0_seq1.path1;transcripts=comp138998_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108381890	108382796	.	+	.	ID=comp138998_c0_seq1.mrna1;geneID=comp138998_c0_seq1.path1;Name=comp138998_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=852;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010047
Chr1	stalkie_big_nohaplotig	exon	108381890	108382169	100	+	.	Parent=comp138998_c0_seq1.mrna1;Target=comp138998_c0_seq1 573 852 -
Chr1	stalkie_big_nohaplotig	exon	108382225	108382796	100	+	.	Parent=comp138998_c0_seq1.mrna1;Target=comp138998_c0_seq1 1 572 -
Chr1	stalkie_big_nohaplotig	CDS	108382112	108382169	.	+	0	Parent=comp138998_c0_seq1.mrna1;Target=comp138998_c0_seq1 573 630 .
Chr1	stalkie_big_nohaplotig	CDS	108382225	108382319	.	+	2	Parent=comp138998_c0_seq1.mrna1;Target=comp138998_c0_seq1 478 572 .
Chr1	gffcl	locus	108414183	108415081	.	+	.	ID=RLOC_00010048;geneIDs=comp142443_c0_seq1.path1;transcripts=comp142443_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108414183	108415081	.	+	.	ID=comp142443_c0_seq1.mrna1;geneID=comp142443_c0_seq1.path1;Name=comp142443_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=899;mismatches=0;indels=0;unknowns=0;Target=comp142443_c0_seq1 899 1 .;CDS_Target=comp142443_c0_seq1 472 344 .;locus=RLOC_00010048
Chr1	stalkie_big_nohaplotig	exon	108414183	108415081	100	+	.	Parent=comp142443_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	108414526	108414654	.	+	0	Parent=comp142443_c0_seq1.mrna1
Chr1	gffcl	locus	108422389	108423554	.	+	.	ID=RLOC_00010049;geneIDs=comp151757_c0_seq1.path1;transcripts=comp151757_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108422389	108423554	.	+	.	ID=comp151757_c0_seq1.mrna1;geneID=comp151757_c0_seq1.path1;Name=comp151757_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.8;matches=1165;mismatches=1;indels=1;unknowns=0;Target=comp151757_c0_seq1 1172 6 .;CDS_Target=comp151757_c0_seq1 858 436 .;locus=RLOC_00010049
Chr1	stalkie_big_nohaplotig	exon	108422389	108423554	99	+	.	Parent=comp151757_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	108422819	108423241	.	+	0	Parent=comp151757_c0_seq1.mrna1
Chr1	gffcl	locus	108463953	108464664	.	-	.	ID=RLOC_00010050;geneIDs=comp151309_c0_seq1.path1;transcripts=comp151309_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108463953	108464664	.	-	.	ID=comp151309_c0_seq1.mrna1;geneID=comp151309_c0_seq1.path1;Name=comp151309_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=653;mismatches=2;indels=0;unknowns=0;Target=comp151309_c0_seq1 145 540 +;locus=RLOC_00010050
Chr1	stalkie_big_nohaplotig	exon	108463953	108464495	99	-	.	Parent=comp151309_c0_seq1.mrna1;Target=comp151309_c0_seq1 113 655 +
Chr1	stalkie_big_nohaplotig	exon	108464553	108464664	100	-	.	Parent=comp151309_c0_seq1.mrna1;Target=comp151309_c0_seq1 1 112 +
Chr1	stalkie_big_nohaplotig	CDS	108464068	108464463	.	-	0	Parent=comp151309_c0_seq1.mrna1
Chr1	gffcl	locus	108475365	108476240	.	+	.	ID=RLOC_00010051;geneIDs=comp151978_c0_seq1.path1;transcripts=comp151978_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108475365	108476240	.	+	.	ID=comp151978_c0_seq1.mrna1;geneID=comp151978_c0_seq1.path1;Name=comp151978_c0_seq1;Dir=sensecoverage=97.6;identity=96.6;matches=749;mismatches=18;indels=8;unknowns=0;locus=RLOC_00010051
Chr1	stalkie_big_nohaplotig	exon	108475365	108475541	96	+	.	Parent=comp151978_c0_seq1.mrna1;Target=comp151978_c0_seq1 20 196 +
Chr1	stalkie_big_nohaplotig	exon	108475592	108475953	96	+	.	Parent=comp151978_c0_seq1.mrna1;Target=comp151978_c0_seq1 197 565 +
Chr1	stalkie_big_nohaplotig	exon	108476013	108476240	96	+	.	Parent=comp151978_c0_seq1.mrna1;Target=comp151978_c0_seq1 566 794 +
Chr1	stalkie_big_nohaplotig	CDS	108475486	108475541	.	+	0	Parent=comp151978_c0_seq1.mrna1;Target=comp151978_c0_seq1 141 196 +
Chr1	stalkie_big_nohaplotig	CDS	108475592	108475702	.	+	1	Parent=comp151978_c0_seq1.mrna1;Target=comp151978_c0_seq1 197 308 +
Chr1	gffcl	locus	108499644	108516251	.	+	.	ID=RLOC_00010052;geneIDs=comp136376_c1_seq1.path1;transcripts=comp136376_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108499644	108516251	.	+	.	ID=comp136376_c1_seq1.mrna1;geneID=comp136376_c1_seq1.path1;Name=comp136376_c1_seq1;Dir=indeterminatecoverage=96.8;identity=100.0;matches=826;mismatches=0;indels=0;unknowns=0;Target=comp136376_c1_seq1 162 73 .;locus=RLOC_00010052
Chr1	stalkie_big_nohaplotig	exon	108499644	108499649	100	+	.	Parent=comp136376_c1_seq1.mrna1;Target=comp136376_c1_seq1 33 28 .
Chr1	stalkie_big_nohaplotig	exon	108515432	108516251	100	+	.	Parent=comp136376_c1_seq1.mrna1;Target=comp136376_c1_seq1 853 34 .
Chr1	stalkie_big_nohaplotig	CDS	108515471	108515560	.	+	0	Parent=comp136376_c1_seq1.mrna1
Chr1	gffcl	locus	108524589	108525711	.	-	.	ID=RLOC_00010053;geneIDs=comp158285_c0_seq1.path1;transcripts=comp158285_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108524589	108525711	.	-	.	ID=comp158285_c0_seq1.mrna1;geneID=comp158285_c0_seq1.path1;Name=comp158285_c0_seq1;Dir=antisensecoverage=98.3;identity=96.4;matches=965;mismatches=27;indels=9;unknowns=0;locus=RLOC_00010053
Chr1	stalkie_big_nohaplotig	exon	108524589	108525146	97	-	.	Parent=comp158285_c0_seq1.mrna1;Target=comp158285_c0_seq1 18 575 -
Chr1	stalkie_big_nohaplotig	exon	108525211	108525443	96	-	.	Parent=comp158285_c0_seq1.mrna1;Target=comp158285_c0_seq1 576 808 -
Chr1	stalkie_big_nohaplotig	exon	108525510	108525711	93	-	.	Parent=comp158285_c0_seq1.mrna1;Target=comp158285_c0_seq1 809 1017 -
Chr1	stalkie_big_nohaplotig	CDS	108525046	108525146	.	-	2	Parent=comp158285_c0_seq1.mrna1;Target=comp158285_c0_seq1 475 575 .
Chr1	stalkie_big_nohaplotig	CDS	108525211	108525443	.	-	1	Parent=comp158285_c0_seq1.mrna1;Target=comp158285_c0_seq1 576 808 .
Chr1	stalkie_big_nohaplotig	CDS	108525510	108525565	.	-	0	Parent=comp158285_c0_seq1.mrna1;Target=comp158285_c0_seq1 809 864 .
Chr1	gffcl	locus	108555674	108556015	.	-	.	ID=RLOC_00010054;geneIDs=comp146101_c0_seq1.path1;transcripts=comp146101_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108555674	108556015	.	-	.	ID=comp146101_c0_seq1.mrna1;geneID=comp146101_c0_seq1.path1;Name=comp146101_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=340;mismatches=2;indels=0;unknowns=0;Target=comp146101_c0_seq1 342 1 .;CDS_Target=comp146101_c0_seq1 147 82 .;locus=RLOC_00010054
Chr1	stalkie_big_nohaplotig	exon	108555674	108556015	99	-	.	Parent=comp146101_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	108555869	108555934	.	-	0	Parent=comp146101_c0_seq1.mrna1
Chr1	gffcl	locus	108556744	108573613	.	+	.	ID=RLOC_00010055;geneIDs=comp155144_c0_seq1.path1;transcripts=comp155144_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108556744	108573613	.	+	.	ID=comp155144_c0_seq1.mrna1;geneID=comp155144_c0_seq1.path1;Name=comp155144_c0_seq1;Dir=sensecoverage=100.0;identity=98.4;matches=598;mismatches=9;indels=1;unknowns=0;Target=comp155144_c0_seq1 3 86 +;locus=RLOC_00010055
Chr1	stalkie_big_nohaplotig	exon	108556744	108556941	99	+	.	Parent=comp155144_c0_seq1.mrna1;Target=comp155144_c0_seq1 1 198 +
Chr1	stalkie_big_nohaplotig	exon	108573205	108573613	97	+	.	Parent=comp155144_c0_seq1.mrna1;Target=comp155144_c0_seq1 199 608 +
Chr1	stalkie_big_nohaplotig	CDS	108556746	108556829	.	+	0	Parent=comp155144_c0_seq1.mrna1
Chr1	gffcl	locus	108564179	108564415	.	+	.	ID=RLOC_00010056;geneIDs=comp123581_c0_seq1.path2;transcripts=comp123581_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	108564179	108564415	.	+	.	ID=comp123581_c0_seq1.mrna2;geneID=comp123581_c0_seq1.path2;Name=comp123581_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.2;matches=228;mismatches=9;indels=0;unknowns=0;Target=comp123581_c0_seq1 237 1 .;CDS_Target=comp123581_c0_seq1 142 59 .;locus=RLOC_00010056
Chr1	stalkie_big_nohaplotig	exon	108564179	108564415	96	+	.	Parent=comp123581_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	108564237	108564320	.	+	0	Parent=comp123581_c0_seq1.mrna2
Chr1	gffcl	locus	108571938	108572279	.	-	.	ID=RLOC_00010057;geneIDs=comp146101_c0_seq1.path2;transcripts=comp146101_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	108571938	108572279	.	-	.	ID=comp146101_c0_seq1.mrna2;geneID=comp146101_c0_seq1.path2;Name=comp146101_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=340;mismatches=2;indels=0;unknowns=0;Target=comp146101_c0_seq1 342 1 .;CDS_Target=comp146101_c0_seq1 147 82 .;locus=RLOC_00010057
Chr1	stalkie_big_nohaplotig	exon	108571938	108572279	99	-	.	Parent=comp146101_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	108572133	108572198	.	-	0	Parent=comp146101_c0_seq1.mrna2
Chr1	gffcl	locus	108573785	108575415	.	-	.	ID=RLOC_00010058;geneIDs=comp159749_c0_seq1.path1;transcripts=comp159749_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108573785	108575415	.	-	.	ID=comp159749_c0_seq1.mrna1;geneID=comp159749_c0_seq1.path1;Name=comp159749_c0_seq1;Dir=indeterminatecoverage=98.9;identity=96.0;matches=1602;mismatches=26;indels=40;unknowns=0;Target=comp159749_c0_seq1 1665 1 .;CDS_Target=comp159749_c0_seq1 514 332 .;locus=RLOC_00010058
Chr1	stalkie_big_nohaplotig	exon	108573785	108575415	96	-	.	Parent=comp159749_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	108574933	108575084	.	-	0	Parent=comp159749_c0_seq1.mrna1
Chr1	gffcl	locus	108577084	108710200	.	-	.	ID=RLOC_00010059;geneIDs=FBgn0259240.1.path1;transcripts=FBgn0259240.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108577084	108710200	.	-	.	ID=FBgn0259240.1.mrna1;geneID=FBgn0259240.1.path1;Name=FBgn0259240.1;Dir=sensecoverage=98.2;identity=99.4;matches=8705;mismatches=55;indels=0;unknowns=0;locus=RLOC_00010059
Chr1	stalkie_big_nohaplotig	exon	108577084	108580949	99	-	.	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 5054 8919 +
Chr1	stalkie_big_nohaplotig	exon	108593375	108593847	100	-	.	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 4581 5053 +
Chr1	stalkie_big_nohaplotig	exon	108596170	108597545	99	-	.	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 3205 4580 +
Chr1	stalkie_big_nohaplotig	exon	108598482	108598674	100	-	.	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 3012 3204 +
Chr1	stalkie_big_nohaplotig	exon	108598758	108598925	99	-	.	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 2844 3011 +
Chr1	stalkie_big_nohaplotig	exon	108608660	108608779	100	-	.	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 2724 2843 +
Chr1	stalkie_big_nohaplotig	exon	108645869	108646076	99	-	.	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 2516 2723 +
Chr1	stalkie_big_nohaplotig	exon	108653345	108653491	99	-	.	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 2369 2515 +
Chr1	stalkie_big_nohaplotig	exon	108661154	108661339	100	-	.	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 2183 2368 +
Chr1	stalkie_big_nohaplotig	exon	108673350	108673559	100	-	.	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 1973 2182 +
Chr1	stalkie_big_nohaplotig	exon	108674951	108675145	99	-	.	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 1778 1972 +
Chr1	stalkie_big_nohaplotig	exon	108676206	108677456	99	-	.	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 527 1777 +
Chr1	stalkie_big_nohaplotig	exon	108703745	108703851	100	-	.	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 420 526 +
Chr1	stalkie_big_nohaplotig	exon	108709941	108710200	99	-	.	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 160 419 +
Chr1	stalkie_big_nohaplotig	CDS	108577084	108580949	.	-	2	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 5054 8919 +
Chr1	stalkie_big_nohaplotig	CDS	108593375	108593847	.	-	1	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 4581 5053 +
Chr1	stalkie_big_nohaplotig	CDS	108596170	108597545	.	-	0	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 3205 4580 +
Chr1	stalkie_big_nohaplotig	CDS	108598482	108598674	.	-	1	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 3012 3204 +
Chr1	stalkie_big_nohaplotig	CDS	108598758	108598925	.	-	1	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 2844 3011 +
Chr1	stalkie_big_nohaplotig	CDS	108608660	108608779	.	-	1	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 2724 2843 +
Chr1	stalkie_big_nohaplotig	CDS	108645869	108646076	.	-	2	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 2516 2723 +
Chr1	stalkie_big_nohaplotig	CDS	108653345	108653491	.	-	2	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 2369 2515 +
Chr1	stalkie_big_nohaplotig	CDS	108661154	108661339	.	-	2	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 2183 2368 +
Chr1	stalkie_big_nohaplotig	CDS	108673350	108673559	.	-	2	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 1973 2182 +
Chr1	stalkie_big_nohaplotig	CDS	108674951	108675145	.	-	2	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 1778 1972 +
Chr1	stalkie_big_nohaplotig	CDS	108676206	108677456	.	-	2	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 527 1777 +
Chr1	stalkie_big_nohaplotig	CDS	108703745	108703851	.	-	1	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 420 526 +
Chr1	stalkie_big_nohaplotig	CDS	108709941	108710200	.	-	0	Parent=FBgn0259240.1.mrna1;Target=FBgn0259240.1 160 419 +
Chr1	gffcl	locus	108685332	108687505	.	+	.	ID=RLOC_00010060;geneIDs=comp151167_c0_seq1.path1;transcripts=comp151167_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108685332	108687505	.	+	.	ID=comp151167_c0_seq1.mrna1;geneID=comp151167_c0_seq1.path1;Name=comp151167_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=2158;mismatches=16;indels=14;unknowns=0;Target=comp151167_c0_seq1 2188 1 .;CDS_Target=comp151167_c0_seq1 1320 1066 .;locus=RLOC_00010060
Chr1	stalkie_big_nohaplotig	exon	108685332	108687505	98	+	.	Parent=comp151167_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	108686393	108686647	.	+	0	Parent=comp151167_c0_seq1.mrna1
Chr1	gffcl	locus	108764210	108764420	.	+	.	ID=RLOC_00010061;geneIDs=comp150287_c0_seq1.path5;transcripts=comp150287_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	108764210	108764420	.	+	.	ID=comp150287_c0_seq1.mrna5;geneID=comp150287_c0_seq1.path5;Name=comp150287_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=205;mismatches=6;indels=0;unknowns=0;Target=comp150287_c0_seq1 211 1 .;CDS_Target=comp150287_c0_seq1 211 2 .;locus=RLOC_00010061
Chr1	stalkie_big_nohaplotig	exon	108764210	108764420	97	+	.	Parent=comp150287_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	108764211	108764420	.	+	0	Parent=comp150287_c0_seq1.mrna5
Chr1	gffcl	locus	108779408	108780270	.	-	.	ID=RLOC_00010062;geneIDs=comp135755_c0_seq1.path1;transcripts=comp135755_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108779408	108780270	.	-	.	ID=comp135755_c0_seq1.mrna1;geneID=comp135755_c0_seq1.path1;Name=comp135755_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.2;matches=842;mismatches=14;indels=19;unknowns=0;Target=comp135755_c0_seq1 868 1 .;CDS_Target=comp135755_c0_seq1 571 449 .;locus=RLOC_00010062
Chr1	stalkie_big_nohaplotig	exon	108779408	108780270	96	-	.	Parent=comp135755_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	108779701	108779823	.	-	0	Parent=comp135755_c0_seq1.mrna1
Chr1	gffcl	locus	108809142	108810376	.	-	.	ID=RLOC_00010064;geneIDs=comp153501_c0_seq1.path1;transcripts=comp153501_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108809142	108810376	.	-	.	ID=comp153501_c0_seq1.mrna1;geneID=comp153501_c0_seq1.path1;Name=comp153501_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=1227;mismatches=8;indels=22;unknowns=0;Target=comp153501_c0_seq1 1257 1 .;CDS_Target=comp153501_c0_seq1 915 643 .;locus=RLOC_00010064
Chr1	stalkie_big_nohaplotig	exon	108809142	108810376	97	-	.	Parent=comp153501_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	108809484	108809734	.	-	0	Parent=comp153501_c0_seq1.mrna1
Chr1	gffcl	locus	108813352	108814619	.	+	.	ID=RLOC_00010065;geneIDs=comp149360_c0_seq1.path1;transcripts=comp149360_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108813352	108814619	.	+	.	ID=comp149360_c0_seq1.mrna1;geneID=comp149360_c0_seq1.path1;Name=comp149360_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.3;matches=1259;mismatches=7;indels=2;unknowns=0;Target=comp149360_c0_seq1 1268 3 .;CDS_Target=comp149360_c0_seq1 1078 878 .;locus=RLOC_00010065
Chr1	stalkie_big_nohaplotig	exon	108813352	108814619	99	+	.	Parent=comp149360_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	108814229	108814429	.	+	0	Parent=comp149360_c0_seq1.mrna1
Chr1	gffcl	locus	108841191	108841323	.	-	.	ID=RLOC_00010066;geneIDs=comp160001_c1_seq1.path2;transcripts=comp160001_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	108841191	108841323	.	-	.	ID=comp160001_c1_seq1.mrna2;geneID=comp160001_c1_seq1.path2;Name=comp160001_c1_seq1;Dir=indeterminatecoverage=10.0;identity=91.0;matches=121;mismatches=11;indels=1;unknowns=0;Target=comp160001_c1_seq1 1317 1186 .;locus=RLOC_00010066
Chr1	stalkie_big_nohaplotig	exon	108841191	108841323	90	-	.	Parent=comp160001_c1_seq1.mrna2
Chr1	gffcl	locus	108859425	108860087	.	-	.	ID=RLOC_00010067;geneIDs=comp134614_c1_seq1.path1;transcripts=comp134614_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108859425	108860087	.	-	.	ID=comp134614_c1_seq1.mrna1;geneID=comp134614_c1_seq1.path1;Name=comp134614_c1_seq1;Dir=indeterminatecoverage=99.7;identity=99.8;matches=662;mismatches=1;indels=0;unknowns=0;Target=comp134614_c1_seq1 663 1 .;CDS_Target=comp134614_c1_seq1 383 177 .;locus=RLOC_00010067
Chr1	stalkie_big_nohaplotig	exon	108859425	108860087	99	-	.	Parent=comp134614_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	108859705	108859911	.	-	0	Parent=comp134614_c1_seq1.mrna1
Chr1	gffcl	locus	108867381	108867944	.	+	.	ID=RLOC_00010068;geneIDs=comp595324_c0_seq1.path1;transcripts=comp595324_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108867381	108867944	.	+	.	ID=comp595324_c0_seq1.mrna1;geneID=comp595324_c0_seq1.path1;Name=comp595324_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=556;mismatches=8;indels=1;unknowns=0;Target=comp595324_c0_seq1 565 1 .;CDS_Target=comp595324_c0_seq1 141 1 .;locus=RLOC_00010068
Chr1	stalkie_big_nohaplotig	exon	108867381	108867944	98	+	.	Parent=comp595324_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	108867381	108867521	.	+	0	Parent=comp595324_c0_seq1.mrna1
Chr1	gffcl	locus	108885131	108885823	.	+	.	ID=RLOC_00010069;geneIDs=comp151873_c0_seq1.path1;transcripts=comp151873_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108885131	108885823	.	+	.	ID=comp151873_c0_seq1.mrna1;geneID=comp151873_c0_seq1.path1;Name=comp151873_c0_seq1;Dir=antisensecoverage=100.0;identity=97.8;matches=633;mismatches=0;indels=14;unknowns=0;Target=comp151873_c0_seq1 177 512 .;locus=RLOC_00010069
Chr1	stalkie_big_nohaplotig	exon	108885131	108885643	97	+	.	Parent=comp151873_c0_seq1.mrna1;Target=comp151873_c0_seq1 128 640 -
Chr1	stalkie_big_nohaplotig	exon	108885697	108885823	100	+	.	Parent=comp151873_c0_seq1.mrna1;Target=comp151873_c0_seq1 1 127 -
Chr1	stalkie_big_nohaplotig	CDS	108885259	108885594	.	+	0	Parent=comp151873_c0_seq1.mrna1
Chr1	gffcl	locus	108927830	108929768	.	+	.	ID=RLOC_00010070;geneIDs=comp154993_c0_seq1.path1,comp156690_c0_seq1.path1;transcripts=comp156690_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108927830	108928557	.	+	.	ID=comp156690_c0_seq1.mrna1;geneID=comp156690_c0_seq1.path1;Name=comp156690_c0_seq1;Dir=sensecoverage=80.9;identity=99.4;matches=668;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010070
Chr1	stalkie_big_nohaplotig	exon	108927830	108927932	99	+	.	Parent=comp156690_c0_seq1.mrna1;Target=comp156690_c0_seq1 142 244 +
Chr1	stalkie_big_nohaplotig	exon	108927989	108928557	99	+	.	Parent=comp156690_c0_seq1.mrna1;Target=comp156690_c0_seq1 245 813 +
Chr1	stalkie_big_nohaplotig	CDS	108927885	108927932	.	+	0	Parent=comp156690_c0_seq1.mrna1;Target=comp156690_c0_seq1 197 244 +
Chr1	stalkie_big_nohaplotig	CDS	108927989	108928309	.	+	0	Parent=comp156690_c0_seq1.mrna1;Target=comp156690_c0_seq1 245 565 +
Chr1	gffcl	locus	108934330	108935092	.	+	.	ID=RLOC_00010071;geneIDs=comp153990_c0_seq1.path1;transcripts=comp153990_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	108934330	108935092	.	+	.	ID=comp153990_c0_seq1.mrna1;geneID=comp153990_c0_seq1.path1;Name=comp153990_c0_seq1;Dir=sensecoverage=96.9;identity=98.3;matches=685;mismatches=12;indels=0;unknowns=0;Target=comp153990_c0_seq1 247 432 +;locus=RLOC_00010071
Chr1	stalkie_big_nohaplotig	exon	108934330	108934572	99	+	.	Parent=comp153990_c0_seq1.mrna1;Target=comp153990_c0_seq1 2 244 +
Chr1	stalkie_big_nohaplotig	exon	108934639	108935092	97	+	.	Parent=comp153990_c0_seq1.mrna1;Target=comp153990_c0_seq1 245 698 +
Chr1	stalkie_big_nohaplotig	CDS	108934641	108934826	.	+	0	Parent=comp153990_c0_seq1.mrna1
Chr1	gffcl	locus	109017455	109019996	.	-	.	ID=RLOC_00010072;geneIDs=ORF276.path1;transcripts=ORF276.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109017455	109019996	.	-	.	ID=ORF276.mrna1;geneID=ORF276.path1;Name=ORF276;Dir=sensecoverage=99.9;identity=99.3;matches=2162;mismatches=15;indels=1;unknowns=0;locus=RLOC_00010072
Chr1	stalkie_big_nohaplotig	exon	109017455	109019554	99	-	.	Parent=ORF276.mrna1;Target=ORF276 82 2181 +
Chr1	stalkie_big_nohaplotig	exon	109019920	109019996	98	-	.	Parent=ORF276.mrna1;Target=ORF276 4 81 +
Chr1	stalkie_big_nohaplotig	CDS	109019505	109019554	.	-	0	Parent=ORF276.mrna1;Target=ORF276 82 131 +
Chr1	stalkie_big_nohaplotig	CDS	109019920	109019961	.	-	0	Parent=ORF276.mrna1;Target=ORF276 39 81 +
Chr1	gffcl	locus	109068320	109068966	.	-	.	ID=RLOC_00010074;geneIDs=comp142382_c0_seq1.path1;transcripts=comp142382_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109068320	109068966	.	-	.	ID=comp142382_c0_seq1.mrna1;geneID=comp142382_c0_seq1.path1;Name=comp142382_c0_seq1;Dir=indeterminatecoverage=98.2;identity=99.4;matches=643;mismatches=4;indels=0;unknowns=0;Target=comp142382_c0_seq1 659 13 .;CDS_Target=comp142382_c0_seq1 303 181 .;locus=RLOC_00010074
Chr1	stalkie_big_nohaplotig	exon	109068320	109068966	99	-	.	Parent=comp142382_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	109068676	109068798	.	-	0	Parent=comp142382_c0_seq1.mrna1
Chr1	gffcl	locus	109112528	109113556	.	-	.	ID=RLOC_00010075;geneIDs=comp149377_c0_seq1.path1;transcripts=comp149377_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109112528	109113556	.	-	.	ID=comp149377_c0_seq1.mrna1;geneID=comp149377_c0_seq1.path1;Name=comp149377_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=834;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010075
Chr1	stalkie_big_nohaplotig	exon	109112528	109112781	100	-	.	Parent=comp149377_c0_seq1.mrna1;Target=comp149377_c0_seq1 1 254 -
Chr1	stalkie_big_nohaplotig	exon	109112847	109113011	100	-	.	Parent=comp149377_c0_seq1.mrna1;Target=comp149377_c0_seq1 255 419 -
Chr1	stalkie_big_nohaplotig	exon	109113087	109113275	100	-	.	Parent=comp149377_c0_seq1.mrna1;Target=comp149377_c0_seq1 420 608 -
Chr1	stalkie_big_nohaplotig	exon	109113330	109113556	99	-	.	Parent=comp149377_c0_seq1.mrna1;Target=comp149377_c0_seq1 609 835 -
Chr1	stalkie_big_nohaplotig	CDS	109112602	109112781	.	-	0	Parent=comp149377_c0_seq1.mrna1;Target=comp149377_c0_seq1 75 254 .
Chr1	stalkie_big_nohaplotig	CDS	109112847	109113011	.	-	0	Parent=comp149377_c0_seq1.mrna1;Target=comp149377_c0_seq1 255 419 .
Chr1	stalkie_big_nohaplotig	CDS	109113087	109113275	.	-	0	Parent=comp149377_c0_seq1.mrna1;Target=comp149377_c0_seq1 420 608 .
Chr1	stalkie_big_nohaplotig	CDS	109113330	109113398	.	-	0	Parent=comp149377_c0_seq1.mrna1;Target=comp149377_c0_seq1 609 677 .
Chr1	gffcl	locus	109222009	109222686	.	-	.	ID=RLOC_00010076;geneIDs=FBgn0039799.1.path1;transcripts=FBgn0039799.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109222009	109222686	.	-	.	ID=FBgn0039799.1.mrna1;geneID=FBgn0039799.1.path1;Name=FBgn0039799.1;Dir=sensecoverage=57.4;identity=92.6;matches=486;mismatches=18;indels=21;unknowns=0;locus=RLOC_00010076
Chr1	stalkie_big_nohaplotig	exon	109222009	109222110	79	-	.	Parent=FBgn0039799.1.mrna1;Target=FBgn0039799.1 410 525 +
Chr1	stalkie_big_nohaplotig	exon	109222172	109222285	88	-	.	Parent=FBgn0039799.1.mrna1;Target=FBgn0039799.1 290 408 +
Chr1	stalkie_big_nohaplotig	exon	109222338	109222464	99	-	.	Parent=FBgn0039799.1.mrna1;Target=FBgn0039799.1 163 289 +
Chr1	stalkie_big_nohaplotig	exon	109222525	109222686	100	-	.	Parent=FBgn0039799.1.mrna1;Target=FBgn0039799.1 1 162 +
Chr1	stalkie_big_nohaplotig	CDS	109222009	109222110	.	-	2	Parent=FBgn0039799.1.mrna1;Target=FBgn0039799.1 410 525 +
Chr1	stalkie_big_nohaplotig	CDS	109222172	109222285	.	-	2	Parent=FBgn0039799.1.mrna1;Target=FBgn0039799.1 290 408 +
Chr1	stalkie_big_nohaplotig	CDS	109222338	109222464	.	-	0	Parent=FBgn0039799.1.mrna1;Target=FBgn0039799.1 163 289 +
Chr1	stalkie_big_nohaplotig	CDS	109222525	109222686	.	-	0	Parent=FBgn0039799.1.mrna1;Target=FBgn0039799.1 1 162 +
Chr1	gffcl	locus	109244688	109279532	.	+	.	ID=RLOC_00010077;geneIDs=comp139169_c0_seq1.path1;transcripts=comp139169_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109244688	109279532	.	+	.	ID=comp139169_c0_seq1.mrna1;geneID=comp139169_c0_seq1.path1;Name=comp139169_c0_seq1;Dir=antisensecoverage=98.8;identity=100.0;matches=1909;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010077
Chr1	stalkie_big_nohaplotig	exon	109244688	109245181	100	+	.	Parent=comp139169_c0_seq1.mrna1;Target=comp139169_c0_seq1 1439 1932 -
Chr1	stalkie_big_nohaplotig	exon	109277075	109277474	100	+	.	Parent=comp139169_c0_seq1.mrna1;Target=comp139169_c0_seq1 1039 1438 -
Chr1	stalkie_big_nohaplotig	exon	109277891	109278823	100	+	.	Parent=comp139169_c0_seq1.mrna1;Target=comp139169_c0_seq1 106 1038 -
Chr1	stalkie_big_nohaplotig	exon	109279451	109279532	100	+	.	Parent=comp139169_c0_seq1.mrna1;Target=comp139169_c0_seq1 24 105 -
Chr1	stalkie_big_nohaplotig	CDS	109277252	109277474	.	+	0	Parent=comp139169_c0_seq1.mrna1;Target=comp139169_c0_seq1 1039 1261 .
Chr1	stalkie_big_nohaplotig	CDS	109277891	109278823	.	+	2	Parent=comp139169_c0_seq1.mrna1;Target=comp139169_c0_seq1 106 1038 .
Chr1	stalkie_big_nohaplotig	CDS	109279451	109279530	.	+	2	Parent=comp139169_c0_seq1.mrna1;Target=comp139169_c0_seq1 26 105 .
Chr1	gffcl	locus	109248817	109249938	.	+	.	ID=RLOC_00010078;geneIDs=comp146859_c0_seq1.path1;transcripts=comp146859_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109248817	109249938	.	+	.	ID=comp146859_c0_seq1.mrna1;geneID=comp146859_c0_seq1.path1;Name=comp146859_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.5;matches=1116;mismatches=6;indels=0;unknowns=0;Target=comp146859_c0_seq1 1123 2 .;CDS_Target=comp146859_c0_seq1 498 349 .;locus=RLOC_00010078
Chr1	stalkie_big_nohaplotig	exon	109248817	109249938	99	+	.	Parent=comp146859_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	109249164	109249313	.	+	0	Parent=comp146859_c0_seq1.mrna1
Chr1	gffcl	locus	109265288	109292648	.	-	.	ID=RLOC_00010079;geneIDs=comp146038_c0_seq1.path1;transcripts=comp146038_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109265288	109292648	.	-	.	ID=comp146038_c0_seq1.mrna1;geneID=comp146038_c0_seq1.path1;Name=comp146038_c0_seq1;Dir=sensecoverage=99.5;identity=99.5;matches=631;mismatches=3;indels=0;unknowns=0;Target=comp146038_c0_seq1 229 489 +;locus=RLOC_00010079
Chr1	stalkie_big_nohaplotig	exon	109265288	109265696	100	-	.	Parent=comp146038_c0_seq1.mrna1;Target=comp146038_c0_seq1 226 634 +
Chr1	stalkie_big_nohaplotig	exon	109265756	109265839	100	-	.	Parent=comp146038_c0_seq1.mrna1;Target=comp146038_c0_seq1 142 225 +
Chr1	stalkie_big_nohaplotig	exon	109292508	109292648	97	-	.	Parent=comp146038_c0_seq1.mrna1;Target=comp146038_c0_seq1 1 141 +
Chr1	stalkie_big_nohaplotig	CDS	109265433	109265693	.	-	0	Parent=comp146038_c0_seq1.mrna1
Chr1	gffcl	locus	109270976	109271511	.	+	.	ID=RLOC_00010080;geneIDs=comp141706_c0_seq1.path1;transcripts=comp141706_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109270976	109271511	.	+	.	ID=comp141706_c0_seq1.mrna1;geneID=comp141706_c0_seq1.path1;Name=comp141706_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=528;mismatches=1;indels=7;unknowns=0;Target=comp141706_c0_seq1 529 1 .;CDS_Target=comp141706_c0_seq1 113 3 .;locus=RLOC_00010080
Chr1	stalkie_big_nohaplotig	exon	109270976	109271511	98	+	.	Parent=comp141706_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	109270978	109271095	.	+	0	Parent=comp141706_c0_seq1.mrna1
Chr1	gffcl	locus	109295981	111271021	.	+	.	ID=RLOC_00010081;geneIDs=FBgn0264449.1.path1,comp150755_c0_seq1.path1,comp163463_c2_seq1.path1;transcripts=comp163463_c2_seq1.mrna1,FBgn0264449.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109296640	111271021	.	+	.	ID=comp163463_c2_seq1.mrna1;geneID=comp163463_c2_seq1.path1;Name=comp163463_c2_seq1;Dir=antisensecoverage=99.9;identity=99.4;matches=4491;mismatches=23;indels=3;unknowns=0;locus=RLOC_00010081
Chr1	stalkie_big_nohaplotig	exon	109296640	109296671	85	+	.	Parent=comp163463_c2_seq1.mrna1;Target=comp163463_c2_seq1 5201 5235 -
Chr1	stalkie_big_nohaplotig	exon	109333202	109333213	100	+	.	Parent=comp163463_c2_seq1.mrna1;Target=comp163463_c2_seq1 5161 5172 -
Chr1	stalkie_big_nohaplotig	exon	109342792	109342801	100	+	.	Parent=comp163463_c2_seq1.mrna1;Target=comp163463_c2_seq1 5127 5136 -
Chr1	stalkie_big_nohaplotig	exon	109362680	109362689	80	+	.	Parent=comp163463_c2_seq1.mrna1;Target=comp163463_c2_seq1 5117 5126 -
Chr1	stalkie_big_nohaplotig	exon	111212625	111212689	100	+	.	Parent=comp163463_c2_seq1.mrna1;Target=comp163463_c2_seq1 4383 4447 -
Chr1	stalkie_big_nohaplotig	exon	111257797	111258960	99	+	.	Parent=comp163463_c2_seq1.mrna1;Target=comp163463_c2_seq1 3219 4382 -
Chr1	stalkie_big_nohaplotig	exon	111259031	111259265	100	+	.	Parent=comp163463_c2_seq1.mrna1;Target=comp163463_c2_seq1 2984 3218 -
Chr1	stalkie_big_nohaplotig	exon	111259671	111259939	99	+	.	Parent=comp163463_c2_seq1.mrna1;Target=comp163463_c2_seq1 2715 2983 -
Chr1	stalkie_big_nohaplotig	exon	111260017	111260439	99	+	.	Parent=comp163463_c2_seq1.mrna1;Target=comp163463_c2_seq1 2292 2714 -
Chr1	stalkie_big_nohaplotig	exon	111260499	111260781	100	+	.	Parent=comp163463_c2_seq1.mrna1;Target=comp163463_c2_seq1 2009 2291 -
Chr1	stalkie_big_nohaplotig	exon	111263101	111263213	100	+	.	Parent=comp163463_c2_seq1.mrna1;Target=comp163463_c2_seq1 1896 2008 -
Chr1	stalkie_big_nohaplotig	exon	111263276	111263485	99	+	.	Parent=comp163463_c2_seq1.mrna1;Target=comp163463_c2_seq1 1686 1895 -
Chr1	stalkie_big_nohaplotig	exon	111269124	111269219	100	+	.	Parent=comp163463_c2_seq1.mrna1;Target=comp163463_c2_seq1 1590 1685 -
Chr1	stalkie_big_nohaplotig	exon	111269347	111269688	99	+	.	Parent=comp163463_c2_seq1.mrna1;Target=comp163463_c2_seq1 1248 1589 -
Chr1	stalkie_big_nohaplotig	exon	111269775	111271021	99	+	.	Parent=comp163463_c2_seq1.mrna1;Target=comp163463_c2_seq1 1 1247 -
Chr1	stalkie_big_nohaplotig	CDS	109296640	109296671	.	+	0	Parent=comp163463_c2_seq1.mrna1;Target=comp163463_c2_seq1 5201 5235 .
Chr1	stalkie_big_nohaplotig	CDS	109333202	109333213	.	+	1	Parent=comp163463_c2_seq1.mrna1;Target=comp163463_c2_seq1 5161 5172 .
Chr1	stalkie_big_nohaplotig	CDS	109342792	109342801	.	+	1	Parent=comp163463_c2_seq1.mrna1;Target=comp163463_c2_seq1 5127 5136 .
Chr1	stalkie_big_nohaplotig	CDS	109362680	109362689	.	+	0	Parent=comp163463_c2_seq1.mrna1;Target=comp163463_c2_seq1 5117 5126 .
Chr1	stalkie_big_nohaplotig	CDS	111212625	111212655	.	+	2	Parent=comp163463_c2_seq1.mrna1;Target=comp163463_c2_seq1 4417 4447 .
Chr1	stalkie_big_nohaplotig	mRNA	111212625	111271019	.	+	.	ID=FBgn0264449.1.mrna1;geneID=FBgn0264449.1.path1;Name=FBgn0264449.1;Dir=sensecoverage=98.5;identity=99.6;matches=4292;mismatches=18;indels=0;unknowns=0;locus=RLOC_00010081
Chr1	stalkie_big_nohaplotig	exon	111212625	111212689	100	+	.	Parent=FBgn0264449.1.mrna1;Target=FBgn0264449.1 68 132 +
Chr1	stalkie_big_nohaplotig	exon	111257797	111258960	99	+	.	Parent=FBgn0264449.1.mrna1;Target=FBgn0264449.1 133 1296 +
Chr1	stalkie_big_nohaplotig	exon	111259031	111259265	100	+	.	Parent=FBgn0264449.1.mrna1;Target=FBgn0264449.1 1297 1531 +
Chr1	stalkie_big_nohaplotig	exon	111259806	111259939	99	+	.	Parent=FBgn0264449.1.mrna1;Target=FBgn0264449.1 1532 1665 +
Chr1	stalkie_big_nohaplotig	exon	111260017	111260439	99	+	.	Parent=FBgn0264449.1.mrna1;Target=FBgn0264449.1 1666 2088 +
Chr1	stalkie_big_nohaplotig	exon	111260499	111260781	100	+	.	Parent=FBgn0264449.1.mrna1;Target=FBgn0264449.1 2089 2371 +
Chr1	stalkie_big_nohaplotig	exon	111263101	111263213	100	+	.	Parent=FBgn0264449.1.mrna1;Target=FBgn0264449.1 2372 2484 +
Chr1	stalkie_big_nohaplotig	exon	111263276	111263485	99	+	.	Parent=FBgn0264449.1.mrna1;Target=FBgn0264449.1 2485 2694 +
Chr1	stalkie_big_nohaplotig	exon	111269124	111269219	100	+	.	Parent=FBgn0264449.1.mrna1;Target=FBgn0264449.1 2695 2790 +
Chr1	stalkie_big_nohaplotig	exon	111269347	111269688	99	+	.	Parent=FBgn0264449.1.mrna1;Target=FBgn0264449.1 2791 3132 +
Chr1	stalkie_big_nohaplotig	exon	111269775	111271019	99	+	.	Parent=FBgn0264449.1.mrna1;Target=FBgn0264449.1 3133 4377 +
Chr1	stalkie_big_nohaplotig	CDS	111212627	111212689	.	+	0	Parent=FBgn0264449.1.mrna1;Target=FBgn0264449.1 70 132 +
Chr1	stalkie_big_nohaplotig	CDS	111257797	111258960	.	+	0	Parent=FBgn0264449.1.mrna1;Target=FBgn0264449.1 133 1296 +
Chr1	stalkie_big_nohaplotig	CDS	111259031	111259265	.	+	0	Parent=FBgn0264449.1.mrna1;Target=FBgn0264449.1 1297 1531 +
Chr1	stalkie_big_nohaplotig	CDS	111259806	111259939	.	+	2	Parent=FBgn0264449.1.mrna1;Target=FBgn0264449.1 1532 1665 +
Chr1	stalkie_big_nohaplotig	CDS	111260017	111260439	.	+	0	Parent=FBgn0264449.1.mrna1;Target=FBgn0264449.1 1666 2088 +
Chr1	stalkie_big_nohaplotig	CDS	111260499	111260781	.	+	0	Parent=FBgn0264449.1.mrna1;Target=FBgn0264449.1 2089 2371 +
Chr1	stalkie_big_nohaplotig	CDS	111263101	111263213	.	+	2	Parent=FBgn0264449.1.mrna1;Target=FBgn0264449.1 2372 2484 +
Chr1	stalkie_big_nohaplotig	CDS	111263276	111263485	.	+	0	Parent=FBgn0264449.1.mrna1;Target=FBgn0264449.1 2485 2694 +
Chr1	stalkie_big_nohaplotig	CDS	111269124	111269219	.	+	0	Parent=FBgn0264449.1.mrna1;Target=FBgn0264449.1 2695 2790 +
Chr1	stalkie_big_nohaplotig	CDS	111269347	111269688	.	+	0	Parent=FBgn0264449.1.mrna1;Target=FBgn0264449.1 2791 3132 +
Chr1	stalkie_big_nohaplotig	CDS	111269775	111271019	.	+	0	Parent=FBgn0264449.1.mrna1;Target=FBgn0264449.1 3133 4377 +
Chr1	gffcl	locus	109328716	109329077	.	-	.	ID=RLOC_00010082;geneIDs=comp151573_c1_seq1.path6;transcripts=comp151573_c1_seq1.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	109328716	109329077	.	-	.	ID=comp151573_c1_seq1.mrna6;geneID=comp151573_c1_seq1.path6;Name=comp151573_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=359;mismatches=3;indels=0;unknowns=0;Target=comp151573_c1_seq1 362 1 .;CDS_Target=comp151573_c1_seq1 120 1 .;locus=RLOC_00010082
Chr1	stalkie_big_nohaplotig	exon	109328716	109329077	99	-	.	Parent=comp151573_c1_seq1.mrna6
Chr1	stalkie_big_nohaplotig	CDS	109328958	109329077	.	-	0	Parent=comp151573_c1_seq1.mrna6
Chr1	gffcl	locus	109331682	109331892	.	+	.	ID=RLOC_00010083;geneIDs=comp150287_c0_seq1.path7;transcripts=comp150287_c0_seq1.mrna7
Chr1	stalkie_big_nohaplotig	mRNA	109331682	109331892	.	+	.	ID=comp150287_c0_seq1.mrna7;geneID=comp150287_c0_seq1.path7;Name=comp150287_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=204;mismatches=7;indels=0;unknowns=0;Target=comp150287_c0_seq1 211 1 .;CDS_Target=comp150287_c0_seq1 211 2 .;locus=RLOC_00010083
Chr1	stalkie_big_nohaplotig	exon	109331682	109331892	96	+	.	Parent=comp150287_c0_seq1.mrna7
Chr1	stalkie_big_nohaplotig	CDS	109331683	109331892	.	+	0	Parent=comp150287_c0_seq1.mrna7
Chr1	gffcl	locus	109387617	109388552	.	-	.	ID=RLOC_00010084;geneIDs=comp151869_c0_seq1.path1;transcripts=comp151869_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109387617	109388552	.	-	.	ID=comp151869_c0_seq1.mrna1;geneID=comp151869_c0_seq1.path1;Name=comp151869_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=716;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010084
Chr1	stalkie_big_nohaplotig	exon	109387617	109387918	100	-	.	Parent=comp151869_c0_seq1.mrna1;Target=comp151869_c0_seq1 415 716 +
Chr1	stalkie_big_nohaplotig	exon	109388013	109388177	100	-	.	Parent=comp151869_c0_seq1.mrna1;Target=comp151869_c0_seq1 250 414 +
Chr1	stalkie_big_nohaplotig	exon	109388231	109388416	100	-	.	Parent=comp151869_c0_seq1.mrna1;Target=comp151869_c0_seq1 64 249 +
Chr1	stalkie_big_nohaplotig	exon	109388490	109388552	100	-	.	Parent=comp151869_c0_seq1.mrna1;Target=comp151869_c0_seq1 1 63 +
Chr1	stalkie_big_nohaplotig	CDS	109387757	109387918	.	-	0	Parent=comp151869_c0_seq1.mrna1;Target=comp151869_c0_seq1 415 576 +
Chr1	stalkie_big_nohaplotig	CDS	109388013	109388177	.	-	0	Parent=comp151869_c0_seq1.mrna1;Target=comp151869_c0_seq1 250 414 +
Chr1	stalkie_big_nohaplotig	CDS	109388231	109388416	.	-	0	Parent=comp151869_c0_seq1.mrna1;Target=comp151869_c0_seq1 64 249 +
Chr1	stalkie_big_nohaplotig	CDS	109388490	109388552	.	-	0	Parent=comp151869_c0_seq1.mrna1;Target=comp151869_c0_seq1 1 63 +
Chr1	gffcl	locus	109427316	109429576	.	-	.	ID=RLOC_00010085;geneIDs=comp161965_c0_seq1.path1;transcripts=comp161965_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109427316	109429576	.	-	.	ID=comp161965_c0_seq1.mrna1;geneID=comp161965_c0_seq1.path1;Name=comp161965_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1399;mismatches=7;indels=1;unknowns=0;locus=RLOC_00010085
Chr1	stalkie_big_nohaplotig	exon	109427316	109427709	99	-	.	Parent=comp161965_c0_seq1.mrna1;Target=comp161965_c0_seq1 1407 1014 .
Chr1	stalkie_big_nohaplotig	exon	109427765	109427912	100	-	.	Parent=comp161965_c0_seq1.mrna1;Target=comp161965_c0_seq1 1013 866 .
Chr1	stalkie_big_nohaplotig	exon	109427967	109428202	99	-	.	Parent=comp161965_c0_seq1.mrna1;Target=comp161965_c0_seq1 865 629 .
Chr1	stalkie_big_nohaplotig	exon	109428262	109428536	100	-	.	Parent=comp161965_c0_seq1.mrna1;Target=comp161965_c0_seq1 628 354 .
Chr1	stalkie_big_nohaplotig	exon	109429224	109429576	98	-	.	Parent=comp161965_c0_seq1.mrna1;Target=comp161965_c0_seq1 353 1 .
Chr1	stalkie_big_nohaplotig	CDS	109427875	109427912	.	-	0	Parent=comp161965_c0_seq1.mrna1;Target=comp161965_c0_seq1 903 866 .
Chr1	stalkie_big_nohaplotig	CDS	109427967	109428202	.	-	2	Parent=comp161965_c0_seq1.mrna1;Target=comp161965_c0_seq1 865 629 .
Chr1	stalkie_big_nohaplotig	CDS	109428262	109428304	.	-	0	Parent=comp161965_c0_seq1.mrna1;Target=comp161965_c0_seq1 628 586 .
Chr1	gffcl	locus	109469302	109469956	.	+	.	ID=RLOC_00010086;geneIDs=comp150324_c0_seq1.path1;transcripts=comp150324_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109469302	109469956	.	+	.	ID=comp150324_c0_seq1.mrna1;geneID=comp150324_c0_seq1.path1;Name=comp150324_c0_seq1;Dir=sensecoverage=99.0;identity=99.5;matches=591;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010086
Chr1	stalkie_big_nohaplotig	exon	109469302	109469461	100	+	.	Parent=comp150324_c0_seq1.mrna1;Target=comp150324_c0_seq1 1 160 +
Chr1	stalkie_big_nohaplotig	exon	109469523	109469956	99	+	.	Parent=comp150324_c0_seq1.mrna1;Target=comp150324_c0_seq1 161 594 +
Chr1	stalkie_big_nohaplotig	CDS	109469381	109469461	.	+	0	Parent=comp150324_c0_seq1.mrna1;Target=comp150324_c0_seq1 80 160 +
Chr1	stalkie_big_nohaplotig	CDS	109469523	109469798	.	+	0	Parent=comp150324_c0_seq1.mrna1;Target=comp150324_c0_seq1 161 436 +
Chr1	gffcl	locus	109475685	109476581	.	+	.	ID=RLOC_00010087;geneIDs=comp150934_c0_seq1.path1;transcripts=comp150934_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109475685	109476581	.	+	.	ID=comp150934_c0_seq1.mrna1;geneID=comp150934_c0_seq1.path1;Name=comp150934_c0_seq1;Dir=sensecoverage=99.3;identity=99.4;matches=823;mismatches=4;indels=1;unknowns=0;locus=RLOC_00010087
Chr1	stalkie_big_nohaplotig	exon	109475685	109475821	100	+	.	Parent=comp150934_c0_seq1.mrna1;Target=comp150934_c0_seq1 2 138 +
Chr1	stalkie_big_nohaplotig	exon	109475892	109476581	99	+	.	Parent=comp150934_c0_seq1.mrna1;Target=comp150934_c0_seq1 139 829 +
Chr1	stalkie_big_nohaplotig	CDS	109475780	109475821	.	+	0	Parent=comp150934_c0_seq1.mrna1;Target=comp150934_c0_seq1 97 138 +
Chr1	stalkie_big_nohaplotig	CDS	109475892	109476340	.	+	0	Parent=comp150934_c0_seq1.mrna1;Target=comp150934_c0_seq1 139 588 +
Chr1	gffcl	locus	109491495	109493262	.	+	.	ID=RLOC_00010088;geneIDs=comp156835_c0_seq1.path1;transcripts=comp156835_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109491495	109493262	.	+	.	ID=comp156835_c0_seq1.mrna1;geneID=comp156835_c0_seq1.path1;Name=comp156835_c0_seq1;Dir=antisensecoverage=99.8;identity=99.1;matches=526;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010088
Chr1	stalkie_big_nohaplotig	exon	109491495	109491570	100	+	.	Parent=comp156835_c0_seq1.mrna1;Target=comp156835_c0_seq1 457 532 -
Chr1	stalkie_big_nohaplotig	exon	109491632	109492039	100	+	.	Parent=comp156835_c0_seq1.mrna1;Target=comp156835_c0_seq1 49 456 -
Chr1	stalkie_big_nohaplotig	exon	109493216	109493262	89	+	.	Parent=comp156835_c0_seq1.mrna1;Target=comp156835_c0_seq1 2 48 -
Chr1	stalkie_big_nohaplotig	CDS	109491529	109491570	.	+	0	Parent=comp156835_c0_seq1.mrna1;Target=comp156835_c0_seq1 457 498 .
Chr1	stalkie_big_nohaplotig	CDS	109491632	109492039	.	+	0	Parent=comp156835_c0_seq1.mrna1;Target=comp156835_c0_seq1 49 456 .
Chr1	stalkie_big_nohaplotig	CDS	109493216	109493260	.	+	0	Parent=comp156835_c0_seq1.mrna1;Target=comp156835_c0_seq1 4 48 .
Chr1	gffcl	locus	109497551	109498571	.	+	.	ID=RLOC_00010089;geneIDs=comp147545_c0_seq1.path1;transcripts=comp147545_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109497551	109498571	.	+	.	ID=comp147545_c0_seq1.mrna1;geneID=comp147545_c0_seq1.path1;Name=comp147545_c0_seq1;Dir=sensecoverage=99.8;identity=97.7;matches=795;mismatches=18;indels=1;unknowns=0;locus=RLOC_00010089
Chr1	stalkie_big_nohaplotig	exon	109497551	109497688	97	+	.	Parent=comp147545_c0_seq1.mrna1;Target=comp147545_c0_seq1 3 140 +
Chr1	stalkie_big_nohaplotig	exon	109497897	109498571	97	+	.	Parent=comp147545_c0_seq1.mrna1;Target=comp147545_c0_seq1 141 816 +
Chr1	stalkie_big_nohaplotig	CDS	109497604	109497688	.	+	0	Parent=comp147545_c0_seq1.mrna1;Target=comp147545_c0_seq1 56 140 +
Chr1	stalkie_big_nohaplotig	CDS	109497897	109497919	.	+	2	Parent=comp147545_c0_seq1.mrna1;Target=comp147545_c0_seq1 141 163 +
Chr1	gffcl	locus	109547323	109640151	.	-	.	ID=RLOC_00010090;geneIDs=FBgn0021764.1.path1;transcripts=FBgn0021764.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109547323	109640151	.	-	.	ID=FBgn0021764.1.mrna1;geneID=FBgn0021764.1.path1;Name=FBgn0021764.1;Dir=sensecoverage=100.0;identity=99.8;matches=5956;mismatches=13;indels=1;unknowns=0;locus=RLOC_00010090
Chr1	stalkie_big_nohaplotig	exon	109547323	109547494	100	-	.	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 5799 5970 +
Chr1	stalkie_big_nohaplotig	exon	109548646	109548669	100	-	.	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 5775 5798 +
Chr1	stalkie_big_nohaplotig	exon	109548889	109549167	99	-	.	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 5495 5774 +
Chr1	stalkie_big_nohaplotig	exon	109549239	109550956	99	-	.	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 3777 5494 +
Chr1	stalkie_big_nohaplotig	exon	109551019	109552522	99	-	.	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 2273 3776 +
Chr1	stalkie_big_nohaplotig	exon	109554301	109554498	98	-	.	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 2075 2272 +
Chr1	stalkie_big_nohaplotig	exon	109557191	109557619	100	-	.	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 1646 2074 +
Chr1	stalkie_big_nohaplotig	exon	109559714	109559869	99	-	.	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 1490 1645 +
Chr1	stalkie_big_nohaplotig	exon	109563788	109563907	100	-	.	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 1370 1489 +
Chr1	stalkie_big_nohaplotig	exon	109578172	109578299	100	-	.	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 1242 1369 +
Chr1	stalkie_big_nohaplotig	exon	109578394	109579141	99	-	.	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 494 1241 +
Chr1	stalkie_big_nohaplotig	exon	109580733	109580909	100	-	.	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 317 493 +
Chr1	stalkie_big_nohaplotig	exon	109591974	109592075	100	-	.	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 215 316 +
Chr1	stalkie_big_nohaplotig	exon	109639938	109640151	99	-	.	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 1 214 +
Chr1	stalkie_big_nohaplotig	CDS	109547323	109547494	.	-	2	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 5799 5970 +
Chr1	stalkie_big_nohaplotig	CDS	109548646	109548669	.	-	2	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 5775 5798 +
Chr1	stalkie_big_nohaplotig	CDS	109548889	109549167	.	-	2	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 5495 5774 +
Chr1	stalkie_big_nohaplotig	CDS	109549239	109550956	.	-	1	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 3777 5494 +
Chr1	stalkie_big_nohaplotig	CDS	109551019	109552522	.	-	2	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 2273 3776 +
Chr1	stalkie_big_nohaplotig	CDS	109554301	109554498	.	-	2	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 2075 2272 +
Chr1	stalkie_big_nohaplotig	CDS	109557191	109557619	.	-	2	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 1646 2074 +
Chr1	stalkie_big_nohaplotig	CDS	109559714	109559869	.	-	2	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 1490 1645 +
Chr1	stalkie_big_nohaplotig	CDS	109563788	109563907	.	-	2	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 1370 1489 +
Chr1	stalkie_big_nohaplotig	CDS	109578172	109578299	.	-	1	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 1242 1369 +
Chr1	stalkie_big_nohaplotig	CDS	109578394	109579141	.	-	2	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 494 1241 +
Chr1	stalkie_big_nohaplotig	CDS	109580733	109580909	.	-	2	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 317 493 +
Chr1	stalkie_big_nohaplotig	CDS	109591974	109592075	.	-	2	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 215 316 +
Chr1	stalkie_big_nohaplotig	CDS	109639938	109640151	.	-	0	Parent=FBgn0021764.1.mrna1;Target=FBgn0021764.1 1 214 +
Chr1	gffcl	locus	109778475	109850728	.	.	.	ID=RLOC_00010092;geneIDs=AAEL002781.1.path1,comp150829_c0_seq1.path1,comp153098_c0_seq1.path1,comp153166_c0_seq1.path1;transcripts=AAEL002781.1.mrna1,comp153098_c0_seq1.mrna1,comp153166_c0_seq1.mrna1,comp150829_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109778475	109850728	.	-	.	ID=AAEL002781.1.mrna1;geneID=AAEL002781.1.path1;Name=AAEL002781.1;Dir=sensecoverage=74.5;identity=99.9;matches=911;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010092
Chr1	stalkie_big_nohaplotig	exon	109778475	109778768	100	-	.	Parent=AAEL002781.1.mrna1;Target=AAEL002781.1 940 1233 +
Chr1	stalkie_big_nohaplotig	exon	109787235	109787347	99	-	.	Parent=AAEL002781.1.mrna1;Target=AAEL002781.1 827 939 +
Chr1	stalkie_big_nohaplotig	exon	109803259	109803446	100	-	.	Parent=AAEL002781.1.mrna1;Target=AAEL002781.1 639 826 +
Chr1	stalkie_big_nohaplotig	exon	109808857	109808982	100	-	.	Parent=AAEL002781.1.mrna1;Target=AAEL002781.1 513 638 +
Chr1	stalkie_big_nohaplotig	exon	109809470	109809640	100	-	.	Parent=AAEL002781.1.mrna1;Target=AAEL002781.1 342 512 +
Chr1	stalkie_big_nohaplotig	exon	109845886	109845892	100	-	.	Parent=AAEL002781.1.mrna1;Target=AAEL002781.1 335 341 +
Chr1	stalkie_big_nohaplotig	exon	109847694	109847698	100	-	.	Parent=AAEL002781.1.mrna1;Target=AAEL002781.1 330 334 +
Chr1	stalkie_big_nohaplotig	exon	109850721	109850728	100	-	.	Parent=AAEL002781.1.mrna1;Target=AAEL002781.1 316 323 +
Chr1	stalkie_big_nohaplotig	CDS	109778475	109778768	.	-	0	Parent=AAEL002781.1.mrna1;Target=AAEL002781.1 940 1233 +
Chr1	stalkie_big_nohaplotig	CDS	109787235	109787347	.	-	2	Parent=AAEL002781.1.mrna1;Target=AAEL002781.1 827 939 +
Chr1	stalkie_big_nohaplotig	CDS	109803259	109803446	.	-	1	Parent=AAEL002781.1.mrna1;Target=AAEL002781.1 639 826 +
Chr1	stalkie_big_nohaplotig	CDS	109808857	109808982	.	-	1	Parent=AAEL002781.1.mrna1;Target=AAEL002781.1 513 638 +
Chr1	stalkie_big_nohaplotig	CDS	109809470	109809640	.	-	1	Parent=AAEL002781.1.mrna1;Target=AAEL002781.1 342 512 +
Chr1	stalkie_big_nohaplotig	CDS	109845886	109845892	.	-	2	Parent=AAEL002781.1.mrna1;Target=AAEL002781.1 335 341 +
Chr1	stalkie_big_nohaplotig	CDS	109847694	109847698	.	-	1	Parent=AAEL002781.1.mrna1;Target=AAEL002781.1 330 334 +
Chr1	stalkie_big_nohaplotig	CDS	109850721	109850728	.	-	0	Parent=AAEL002781.1.mrna1;Target=AAEL002781.1 316 323 +
Chr1	stalkie_big_nohaplotig	mRNA	109778747	109780055	.	+	.	ID=comp153098_c0_seq1.mrna1;geneID=comp153098_c0_seq1.path1;Name=comp153098_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.5;matches=1304;mismatches=5;indels=1;unknowns=0;Target=comp153098_c0_seq1 1310 1 .;CDS_Target=comp153098_c0_seq1 848 648 .;locus=RLOC_00010092
Chr1	stalkie_big_nohaplotig	exon	109778747	109780055	99	+	.	Parent=comp153098_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	109779393	109779593	.	+	0	Parent=comp153098_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109786423	109787258	.	+	.	ID=comp153166_c0_seq1.mrna1;geneID=comp153166_c0_seq1.path1;Name=comp153166_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.4;matches=831;mismatches=4;indels=1;unknowns=0;Target=comp153166_c0_seq1 839 5 .;CDS_Target=comp153166_c0_seq1 502 314 .;locus=RLOC_00010092
Chr1	stalkie_big_nohaplotig	exon	109786423	109787258	99	+	.	Parent=comp153166_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	109786733	109786921	.	+	0	Parent=comp153166_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109809618	109810518	.	-	.	ID=comp150829_c0_seq1.mrna1;geneID=comp150829_c0_seq1.path1;Name=comp150829_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=887;mismatches=14;indels=0;unknowns=0;Target=comp150829_c0_seq1 901 1 .;CDS_Target=comp150829_c0_seq1 431 297 .;locus=RLOC_00010092
Chr1	stalkie_big_nohaplotig	exon	109809618	109810518	98	-	.	Parent=comp150829_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	109810088	109810222	.	-	0	Parent=comp150829_c0_seq1.mrna1
Chr1	gffcl	locus	109780864	109782016	.	-	.	ID=RLOC_00010093;geneIDs=comp158434_c0_seq1.path1;transcripts=comp158434_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109780864	109782016	.	-	.	ID=comp158434_c0_seq1.mrna1;geneID=comp158434_c0_seq1.path1;Name=comp158434_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.1;matches=1110;mismatches=41;indels=4;unknowns=0;Target=comp158434_c0_seq1 1153 1 .;CDS_Target=comp158434_c0_seq1 937 800 .;locus=RLOC_00010093
Chr1	stalkie_big_nohaplotig	exon	109780864	109782016	96	-	.	Parent=comp158434_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	109781080	109781217	.	-	0	Parent=comp158434_c0_seq1.mrna1
Chr1	gffcl	locus	109783043	109784181	.	.	.	ID=RLOC_00010094;geneIDs=comp118883_c0_seq1.path1,comp138079_c0_seq1.path1;transcripts=comp138079_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109783043	109783702	.	-	.	ID=comp138079_c0_seq1.mrna1;geneID=comp138079_c0_seq1.path1;Name=comp138079_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.4;matches=656;mismatches=4;indels=0;unknowns=0;Target=comp138079_c0_seq1 661 2 .;CDS_Target=comp138079_c0_seq1 284 87 .;locus=RLOC_00010094
Chr1	stalkie_big_nohaplotig	exon	109783043	109783702	99	-	.	Parent=comp138079_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	109783420	109783617	.	-	0	Parent=comp138079_c0_seq1.mrna1
Chr1	gffcl	locus	109822001	109822970	.	+	.	ID=RLOC_00010095;geneIDs=comp145310_c0_seq1.path1;transcripts=comp145310_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109822001	109822970	.	+	.	ID=comp145310_c0_seq1.mrna1;geneID=comp145310_c0_seq1.path1;Name=comp145310_c0_seq1;Dir=antisensecoverage=99.0;identity=96.7;matches=884;mismatches=29;indels=1;unknowns=0;Target=comp145310_c0_seq1 320 574 .;locus=RLOC_00010095
Chr1	stalkie_big_nohaplotig	exon	109822001	109822303	97	+	.	Parent=comp145310_c0_seq1.mrna1;Target=comp145310_c0_seq1 619 920 -
Chr1	stalkie_big_nohaplotig	exon	109822360	109822970	96	+	.	Parent=comp145310_c0_seq1.mrna1;Target=comp145310_c0_seq1 8 618 -
Chr1	stalkie_big_nohaplotig	CDS	109822404	109822658	.	+	0	Parent=comp145310_c0_seq1.mrna1
Chr1	gffcl	locus	109855749	109856411	.	-	.	ID=RLOC_00010096;geneIDs=comp137189_c1_seq1.path1;transcripts=comp137189_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109855749	109856411	.	-	.	ID=comp137189_c1_seq1.mrna1;geneID=comp137189_c1_seq1.path1;Name=comp137189_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=661;mismatches=2;indels=0;unknowns=0;Target=comp137189_c1_seq1 663 1 .;CDS_Target=comp137189_c1_seq1 469 416 .;locus=RLOC_00010096
Chr1	stalkie_big_nohaplotig	exon	109855749	109856411	99	-	.	Parent=comp137189_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	109855943	109855996	.	-	0	Parent=comp137189_c1_seq1.mrna1
Chr1	gffcl	locus	109857286	109867886	.	+	.	ID=RLOC_00010097;geneIDs=comp142394_c0_seq1.path1;transcripts=comp142394_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109857286	109867886	.	+	.	ID=comp142394_c0_seq1.mrna1;geneID=comp142394_c0_seq1.path1;Name=comp142394_c0_seq1;Dir=antisensecoverage=87.5;identity=99.9;matches=1115;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010097
Chr1	stalkie_big_nohaplotig	exon	109857286	109857519	100	+	.	Parent=comp142394_c0_seq1.mrna1;Target=comp142394_c0_seq1 883 1116 -
Chr1	stalkie_big_nohaplotig	exon	109860121	109860309	100	+	.	Parent=comp142394_c0_seq1.mrna1;Target=comp142394_c0_seq1 694 882 -
Chr1	stalkie_big_nohaplotig	exon	109860701	109860954	99	+	.	Parent=comp142394_c0_seq1.mrna1;Target=comp142394_c0_seq1 440 693 -
Chr1	stalkie_big_nohaplotig	exon	109867448	109867886	100	+	.	Parent=comp142394_c0_seq1.mrna1;Target=comp142394_c0_seq1 1 439 -
Chr1	stalkie_big_nohaplotig	CDS	109857286	109857519	.	+	1	Parent=comp142394_c0_seq1.mrna1;Target=comp142394_c0_seq1 883 1116 .
Chr1	stalkie_big_nohaplotig	CDS	109860121	109860309	.	+	1	Parent=comp142394_c0_seq1.mrna1;Target=comp142394_c0_seq1 694 882 .
Chr1	stalkie_big_nohaplotig	CDS	109860701	109860954	.	+	1	Parent=comp142394_c0_seq1.mrna1;Target=comp142394_c0_seq1 440 693 .
Chr1	stalkie_big_nohaplotig	CDS	109867448	109867513	.	+	2	Parent=comp142394_c0_seq1.mrna1;Target=comp142394_c0_seq1 374 439 .
Chr1	gffcl	locus	109889243	109890263	.	-	.	ID=RLOC_00010098;geneIDs=comp160259_c0_seq1.path5;transcripts=comp160259_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	109889243	109890263	.	-	.	ID=comp160259_c0_seq1.mrna5;geneID=comp160259_c0_seq1.path5;Name=comp160259_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=989;mismatches=18;indels=14;unknowns=0;Target=comp160259_c0_seq1 1007 1 .;CDS_Target=comp160259_c0_seq1 929 837 .;locus=RLOC_00010098
Chr1	stalkie_big_nohaplotig	exon	109889243	109890263	96	-	.	Parent=comp160259_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	109889321	109889413	.	-	0	Parent=comp160259_c0_seq1.mrna5
Chr1	gffcl	locus	109891962	109892927	.	+	.	ID=RLOC_00010099;geneIDs=ORF1529.path2;transcripts=ORF1529.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	109891962	109892927	.	+	.	ID=ORF1529.mrna2;geneID=ORF1529.path2;Name=ORF1529;Dir=indeterminatecoverage=91.9;identity=97.5;matches=959;mismatches=7;indels=18;unknowns=0;Target=ORF1529 1071 88 .;locus=RLOC_00010099
Chr1	stalkie_big_nohaplotig	exon	109891962	109892927	97	+	.	Parent=ORF1529.mrna2
Chr1	stalkie_big_nohaplotig	CDS	109891962	109892927	.	+	0	Parent=ORF1529.mrna2
Chr1	gffcl	locus	109892983	109896651	.	+	.	ID=RLOC_00010100;geneIDs=FBgn0263855.path2;transcripts=FBgn0263855.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	109892983	109896651	.	+	.	ID=FBgn0263855.mrna2;geneID=FBgn0263855.path2;Name=FBgn0263855;Dir=sensecoverage=100.0;identity=99.4;matches=1664;mismatches=9;indels=1;unknowns=0;Target=FBgn0263855 3 104 +;locus=RLOC_00010100
Chr1	stalkie_big_nohaplotig	exon	109892983	109894315	99	+	.	Parent=FBgn0263855.mrna2;Target=FBgn0263855 1 1334 +
Chr1	stalkie_big_nohaplotig	exon	109894421	109894535	100	+	.	Parent=FBgn0263855.mrna2;Target=FBgn0263855 1335 1449 +
Chr1	stalkie_big_nohaplotig	exon	109896427	109896651	99	+	.	Parent=FBgn0263855.mrna2;Target=FBgn0263855 1450 1674 +
Chr1	stalkie_big_nohaplotig	CDS	109892985	109893085	.	+	0	Parent=FBgn0263855.mrna2
Chr1	gffcl	locus	109894512	109895251	.	-	.	ID=RLOC_00010101;geneIDs=comp143238_c0_seq1.path2;transcripts=comp143238_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	109894512	109895251	.	-	.	ID=comp143238_c0_seq1.mrna2;geneID=comp143238_c0_seq1.path2;Name=comp143238_c0_seq1;Dir=antisensecoverage=99.9;identity=100.0;matches=678;mismatches=0;indels=0;unknowns=0;Target=comp143238_c0_seq1 536 631 .;locus=RLOC_00010101
Chr1	stalkie_big_nohaplotig	exon	109894512	109895046	100	-	.	Parent=comp143238_c0_seq1.mrna2;Target=comp143238_c0_seq1 1 535 -
Chr1	stalkie_big_nohaplotig	exon	109895109	109895251	100	-	.	Parent=comp143238_c0_seq1.mrna2;Target=comp143238_c0_seq1 536 678 -
Chr1	stalkie_big_nohaplotig	CDS	109895109	109895204	.	-	0	Parent=comp143238_c0_seq1.mrna2
Chr1	gffcl	locus	109911605	109912141	.	+	.	ID=RLOC_00010103;geneIDs=FBgn0030679.1.path1;transcripts=FBgn0030679.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109911605	109912141	.	+	.	ID=FBgn0030679.1.mrna1;geneID=FBgn0030679.1.path1;Name=FBgn0030679.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=535;mismatches=2;indels=0;unknowns=0;Target=FBgn0030679.1 537 1 .;locus=RLOC_00010103
Chr1	stalkie_big_nohaplotig	exon	109911605	109912141	99	+	.	Parent=FBgn0030679.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	109911605	109912141	.	+	0	Parent=FBgn0030679.1.mrna1
Chr1	gffcl	locus	109920628	109921264	.	-	.	ID=RLOC_00010104;geneIDs=comp65207_c0_seq1.path1;transcripts=comp65207_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109920628	109921264	.	-	.	ID=comp65207_c0_seq1.mrna1;geneID=comp65207_c0_seq1.path1;Name=comp65207_c0_seq1;Dir=indeterminatecoverage=98.1;identity=99.5;matches=634;mismatches=0;indels=3;unknowns=0;Target=comp65207_c0_seq1 646 13 .;CDS_Target=comp65207_c0_seq1 471 403 .;locus=RLOC_00010104
Chr1	stalkie_big_nohaplotig	exon	109920628	109921264	99	-	.	Parent=comp65207_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	109920803	109920871	.	-	0	Parent=comp65207_c0_seq1.mrna1
Chr1	gffcl	locus	109921626	109922816	.	+	.	ID=RLOC_00010105;geneIDs=comp155182_c0_seq1.path1;transcripts=comp155182_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109921626	109922816	.	+	.	ID=comp155182_c0_seq1.mrna1;geneID=comp155182_c0_seq1.path1;Name=comp155182_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=1176;mismatches=15;indels=19;unknowns=0;Target=comp155182_c0_seq1 1210 1 .;CDS_Target=comp155182_c0_seq1 829 773 .;locus=RLOC_00010105
Chr1	stalkie_big_nohaplotig	exon	109921626	109922816	97	+	.	Parent=comp155182_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	109922395	109922444	.	+	0	Parent=comp155182_c0_seq1.mrna1
Chr1	gffcl	locus	109925441	109931317	.	-	.	ID=RLOC_00010106;geneIDs=FBgn0030680.1.path1;transcripts=FBgn0030680.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109925441	109931317	.	-	.	ID=FBgn0030680.1.mrna1;geneID=FBgn0030680.1.path1;Name=FBgn0030680.1;Dir=sensecoverage=100.0;identity=99.8;matches=2029;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010106
Chr1	stalkie_big_nohaplotig	exon	109925441	109926469	99	-	.	Parent=FBgn0030680.1.mrna1;Target=FBgn0030680.1 1006 2034 +
Chr1	stalkie_big_nohaplotig	exon	109930182	109930535	99	-	.	Parent=FBgn0030680.1.mrna1;Target=FBgn0030680.1 652 1005 +
Chr1	stalkie_big_nohaplotig	exon	109930596	109930889	100	-	.	Parent=FBgn0030680.1.mrna1;Target=FBgn0030680.1 358 651 +
Chr1	stalkie_big_nohaplotig	exon	109930961	109931317	99	-	.	Parent=FBgn0030680.1.mrna1;Target=FBgn0030680.1 1 357 +
Chr1	stalkie_big_nohaplotig	CDS	109925441	109926469	.	-	0	Parent=FBgn0030680.1.mrna1;Target=FBgn0030680.1 1006 2034 +
Chr1	stalkie_big_nohaplotig	CDS	109930182	109930535	.	-	0	Parent=FBgn0030680.1.mrna1;Target=FBgn0030680.1 652 1005 +
Chr1	stalkie_big_nohaplotig	CDS	109930596	109930889	.	-	0	Parent=FBgn0030680.1.mrna1;Target=FBgn0030680.1 358 651 +
Chr1	stalkie_big_nohaplotig	CDS	109930961	109931317	.	-	0	Parent=FBgn0030680.1.mrna1;Target=FBgn0030680.1 1 357 +
Chr1	gffcl	locus	109926562	109927111	.	+	.	ID=RLOC_00010107;geneIDs=comp149451_c0_seq1.path1;transcripts=comp149451_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109926562	109927111	.	+	.	ID=comp149451_c0_seq1.mrna1;geneID=comp149451_c0_seq1.path1;Name=comp149451_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=548;mismatches=2;indels=0;unknowns=0;Target=comp149451_c0_seq1 550 1 .;CDS_Target=comp149451_c0_seq1 338 207 .;locus=RLOC_00010107
Chr1	stalkie_big_nohaplotig	exon	109926562	109927111	99	+	.	Parent=comp149451_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	109926768	109926899	.	+	0	Parent=comp149451_c0_seq1.mrna1
Chr1	gffcl	locus	109936735	109938572	.	+	.	ID=RLOC_00010108;geneIDs=FBgn0030876.1.path1,comp162015_c3_seq1.path1;transcripts=comp162015_c3_seq1.mrna1,FBgn0030876.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109936735	109938572	.	+	.	ID=comp162015_c3_seq1.mrna1;geneID=comp162015_c3_seq1.path1;Name=comp162015_c3_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=1760;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010108
Chr1	stalkie_big_nohaplotig	exon	109936735	109937523	99	+	.	Parent=comp162015_c3_seq1.mrna1;Target=comp162015_c3_seq1 977 1765 -
Chr1	stalkie_big_nohaplotig	exon	109937597	109938572	99	+	.	Parent=comp162015_c3_seq1.mrna1;Target=comp162015_c3_seq1 1 976 -
Chr1	stalkie_big_nohaplotig	CDS	109937386	109937523	.	+	0	Parent=comp162015_c3_seq1.mrna1;Target=comp162015_c3_seq1 977 1114 .
Chr1	stalkie_big_nohaplotig	CDS	109937597	109937809	.	+	0	Parent=comp162015_c3_seq1.mrna1;Target=comp162015_c3_seq1 764 976 .
Chr1	stalkie_big_nohaplotig	mRNA	109937200	109937806	.	+	.	ID=FBgn0030876.1.mrna1;geneID=FBgn0030876.1.path1;Name=FBgn0030876.1;Dir=sensecoverage=100.0;identity=100.0;matches=468;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010108
Chr1	stalkie_big_nohaplotig	exon	109937200	109937311	100	+	.	Parent=FBgn0030876.1.mrna1;Target=FBgn0030876.1 1 112 +
Chr1	stalkie_big_nohaplotig	exon	109937378	109937523	100	+	.	Parent=FBgn0030876.1.mrna1;Target=FBgn0030876.1 113 258 +
Chr1	stalkie_big_nohaplotig	exon	109937597	109937806	100	+	.	Parent=FBgn0030876.1.mrna1;Target=FBgn0030876.1 259 468 +
Chr1	stalkie_big_nohaplotig	CDS	109937200	109937311	.	+	0	Parent=FBgn0030876.1.mrna1;Target=FBgn0030876.1 1 112 +
Chr1	stalkie_big_nohaplotig	CDS	109937378	109937523	.	+	2	Parent=FBgn0030876.1.mrna1;Target=FBgn0030876.1 113 258 +
Chr1	stalkie_big_nohaplotig	CDS	109937597	109937806	.	+	0	Parent=FBgn0030876.1.mrna1;Target=FBgn0030876.1 259 468 +
Chr1	gffcl	locus	109943856	109944494	.	-	.	ID=RLOC_00010109;geneIDs=comp150101_c0_seq1.path1;transcripts=comp150101_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109943856	109944494	.	-	.	ID=comp150101_c0_seq1.mrna1;geneID=comp150101_c0_seq1.path1;Name=comp150101_c0_seq1;Dir=indeterminatecoverage=96.8;identity=97.0;matches=623;mismatches=16;indels=3;unknowns=0;Target=comp150101_c0_seq1 642 1 .;CDS_Target=comp150101_c0_seq1 213 49 .;locus=RLOC_00010109
Chr1	stalkie_big_nohaplotig	exon	109943856	109944494	97	-	.	Parent=comp150101_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	109944282	109944446	.	-	0	Parent=comp150101_c0_seq1.mrna1
Chr1	gffcl	locus	109944697	109957904	.	-	.	ID=RLOC_00010110;geneIDs=FBgn0003360.2.path1,comp151524_c0_seq1.path1,comp165285_c0_seq1.path1,comp462717_c0_seq1.path1;transcripts=FBgn0003360.2.mrna1,comp462717_c0_seq1.mrna1,comp165285_c0_seq1.mrna1,comp151524_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109944697	109957904	.	-	.	ID=FBgn0003360.2.mrna1;geneID=FBgn0003360.2.path1;Name=FBgn0003360.2;Dir=sensecoverage=100.0;identity=99.9;matches=989;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010110
Chr1	stalkie_big_nohaplotig	exon	109944697	109945168	100	-	.	Parent=FBgn0003360.2.mrna1;Target=FBgn0003360.2 519 990 +
Chr1	stalkie_big_nohaplotig	exon	109945238	109945365	100	-	.	Parent=FBgn0003360.2.mrna1;Target=FBgn0003360.2 391 518 +
Chr1	stalkie_big_nohaplotig	exon	109945437	109945737	100	-	.	Parent=FBgn0003360.2.mrna1;Target=FBgn0003360.2 90 390 +
Chr1	stalkie_big_nohaplotig	exon	109957816	109957904	98	-	.	Parent=FBgn0003360.2.mrna1;Target=FBgn0003360.2 1 89 +
Chr1	stalkie_big_nohaplotig	CDS	109944697	109945168	.	-	1	Parent=FBgn0003360.2.mrna1;Target=FBgn0003360.2 519 990 +
Chr1	stalkie_big_nohaplotig	CDS	109945238	109945365	.	-	0	Parent=FBgn0003360.2.mrna1;Target=FBgn0003360.2 391 518 +
Chr1	stalkie_big_nohaplotig	CDS	109945437	109945737	.	-	1	Parent=FBgn0003360.2.mrna1;Target=FBgn0003360.2 90 390 +
Chr1	stalkie_big_nohaplotig	CDS	109957816	109957904	.	-	0	Parent=FBgn0003360.2.mrna1;Target=FBgn0003360.2 1 89 +
Chr1	stalkie_big_nohaplotig	mRNA	109945693	109951894	.	-	.	ID=comp462717_c0_seq1.mrna1;geneID=comp462717_c0_seq1.path1;Name=comp462717_c0_seq1;Dir=sensecoverage=94.9;identity=99.5;matches=393;mismatches=1;indels=1;unknowns=0;Target=comp462717_c0_seq1 22 54 +;locus=RLOC_00010110
Chr1	stalkie_big_nohaplotig	exon	109945693	109945737	97	-	.	Parent=comp462717_c0_seq1.mrna1;Target=comp462717_c0_seq1 371 415 +
Chr1	stalkie_big_nohaplotig	exon	109951545	109951894	99	-	.	Parent=comp462717_c0_seq1.mrna1;Target=comp462717_c0_seq1 22 370 +
Chr1	stalkie_big_nohaplotig	CDS	109951861	109951894	.	-	0	Parent=comp462717_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109945714	109949969	.	-	.	ID=comp165285_c0_seq1.mrna1;geneID=comp165285_c0_seq1.path1;Name=comp165285_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=384;mismatches=0;indels=0;unknowns=0;Target=comp165285_c0_seq1 81 236 .;locus=RLOC_00010110
Chr1	stalkie_big_nohaplotig	exon	109945714	109945737	100	-	.	Parent=comp165285_c0_seq1.mrna1;Target=comp165285_c0_seq1 1 24 -
Chr1	stalkie_big_nohaplotig	exon	109949610	109949969	100	-	.	Parent=comp165285_c0_seq1.mrna1;Target=comp165285_c0_seq1 25 384 -
Chr1	stalkie_big_nohaplotig	CDS	109949666	109949821	.	-	0	Parent=comp165285_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109948872	109949633	.	-	.	ID=comp151524_c0_seq1.mrna1;geneID=comp151524_c0_seq1.path1;Name=comp151524_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=761;mismatches=1;indels=0;unknowns=0;Target=comp151524_c0_seq1 762 1 .;CDS_Target=comp151524_c0_seq1 277 200 .;locus=RLOC_00010110
Chr1	stalkie_big_nohaplotig	exon	109948872	109949633	99	-	.	Parent=comp151524_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	109949357	109949434	.	-	0	Parent=comp151524_c0_seq1.mrna1
Chr1	gffcl	locus	109947224	109947824	.	-	.	ID=RLOC_00010111;geneIDs=comp147030_c1_seq1.path1;transcripts=comp147030_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109947224	109947824	.	-	.	ID=comp147030_c1_seq1.mrna1;geneID=comp147030_c1_seq1.path1;Name=comp147030_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=594;mismatches=6;indels=1;unknowns=0;Target=comp147030_c1_seq1 600 1 .;CDS_Target=comp147030_c1_seq1 423 316 .;locus=RLOC_00010111
Chr1	stalkie_big_nohaplotig	exon	109947224	109947824	98	-	.	Parent=comp147030_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	109947402	109947509	.	-	0	Parent=comp147030_c1_seq1.mrna1
Chr1	gffcl	locus	109953486	109954356	.	+	.	ID=RLOC_00010112;geneIDs=comp136906_c0_seq1.path1;transcripts=comp136906_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109953486	109954356	.	+	.	ID=comp136906_c0_seq1.mrna1;geneID=comp136906_c0_seq1.path1;Name=comp136906_c0_seq1;Dir=indeterminatecoverage=70.4;identity=99.2;matches=356;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010112
Chr1	stalkie_big_nohaplotig	exon	109953486	109953809	99	+	.	Parent=comp136906_c0_seq1.mrna1;Target=comp136906_c0_seq1 326 3 .
Chr1	stalkie_big_nohaplotig	exon	109954322	109954356	100	+	.	Parent=comp136906_c0_seq1.mrna1;Target=comp136906_c0_seq1 361 327 .
Chr1	stalkie_big_nohaplotig	CDS	109953734	109953809	.	+	0	Parent=comp136906_c0_seq1.mrna1;Target=comp136906_c0_seq1 326 251 .
Chr1	stalkie_big_nohaplotig	CDS	109954322	109954329	.	+	2	Parent=comp136906_c0_seq1.mrna1;Target=comp136906_c0_seq1 334 327 .
Chr1	gffcl	locus	109959823	109961211	.	-	.	ID=RLOC_00010113;geneIDs=FBgn0025640.4.path1;transcripts=FBgn0025640.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	109959823	109961211	.	-	.	ID=FBgn0025640.4.mrna1;geneID=FBgn0025640.4.path1;Name=FBgn0025640.4;Dir=sensecoverage=100.0;identity=98.9;matches=991;mismatches=11;indels=0;unknowns=0;locus=RLOC_00010113
Chr1	stalkie_big_nohaplotig	exon	109959823	109960177	98	-	.	Parent=FBgn0025640.4.mrna1;Target=FBgn0025640.4 648 1002 +
Chr1	stalkie_big_nohaplotig	exon	109960238	109960434	98	-	.	Parent=FBgn0025640.4.mrna1;Target=FBgn0025640.4 451 647 +
Chr1	stalkie_big_nohaplotig	exon	109960490	109960618	98	-	.	Parent=FBgn0025640.4.mrna1;Target=FBgn0025640.4 322 450 +
Chr1	stalkie_big_nohaplotig	exon	109960789	109960878	100	-	.	Parent=FBgn0025640.4.mrna1;Target=FBgn0025640.4 232 321 +
Chr1	stalkie_big_nohaplotig	exon	109960930	109961062	100	-	.	Parent=FBgn0025640.4.mrna1;Target=FBgn0025640.4 99 231 +
Chr1	stalkie_big_nohaplotig	exon	109961114	109961211	100	-	.	Parent=FBgn0025640.4.mrna1;Target=FBgn0025640.4 1 98 +
Chr1	stalkie_big_nohaplotig	CDS	109959823	109960177	.	-	1	Parent=FBgn0025640.4.mrna1;Target=FBgn0025640.4 648 1002 +
Chr1	stalkie_big_nohaplotig	CDS	109960238	109960434	.	-	0	Parent=FBgn0025640.4.mrna1;Target=FBgn0025640.4 451 647 +
Chr1	stalkie_big_nohaplotig	CDS	109960490	109960618	.	-	0	Parent=FBgn0025640.4.mrna1;Target=FBgn0025640.4 322 450 +
Chr1	stalkie_big_nohaplotig	CDS	109960789	109960878	.	-	0	Parent=FBgn0025640.4.mrna1;Target=FBgn0025640.4 232 321 +
Chr1	stalkie_big_nohaplotig	CDS	109960930	109961062	.	-	1	Parent=FBgn0025640.4.mrna1;Target=FBgn0025640.4 99 231 +
Chr1	stalkie_big_nohaplotig	CDS	109961114	109961211	.	-	0	Parent=FBgn0025640.4.mrna1;Target=FBgn0025640.4 1 98 +
Chr1	gffcl	locus	110003630	110004020	.	-	.	ID=RLOC_00010114;geneIDs=comp153301_c0_seq1.path2;transcripts=comp153301_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	110003630	110004020	.	-	.	ID=comp153301_c0_seq1.mrna2;geneID=comp153301_c0_seq1.path2;Name=comp153301_c0_seq1;Dir=indeterminatecoverage=94.7;identity=99.2;matches=388;mismatches=3;indels=0;unknowns=0;Target=comp153301_c0_seq1 413 23 .;CDS_Target=comp153301_c0_seq1 31 23 .;locus=RLOC_00010114
Chr1	stalkie_big_nohaplotig	exon	110003630	110004020	99	-	.	Parent=comp153301_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	110004012	110004020	.	-	0	Parent=comp153301_c0_seq1.mrna2
Chr1	gffcl	locus	110005523	110007964	.	+	.	ID=RLOC_00010115;geneIDs=comp153301_c0_seq1.path1;transcripts=comp153301_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110005523	110007964	.	+	.	ID=comp153301_c0_seq1.mrna1;geneID=comp153301_c0_seq1.path1;Name=comp153301_c0_seq1;Dir=sensecoverage=94.7;identity=99.7;matches=390;mismatches=1;indels=0;unknowns=0;Target=comp153301_c0_seq1 24 188 +;locus=RLOC_00010115
Chr1	stalkie_big_nohaplotig	exon	110005523	110005711	100	+	.	Parent=comp153301_c0_seq1.mrna1;Target=comp153301_c0_seq1 23 211 +
Chr1	stalkie_big_nohaplotig	exon	110007763	110007964	99	+	.	Parent=comp153301_c0_seq1.mrna1;Target=comp153301_c0_seq1 212 413 +
Chr1	stalkie_big_nohaplotig	CDS	110005524	110005688	.	+	0	Parent=comp153301_c0_seq1.mrna1
Chr1	gffcl	locus	110023705	110025871	.	+	.	ID=RLOC_00010116;geneIDs=FBgn0032721.2.path1;transcripts=FBgn0032721.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110023705	110025871	.	+	.	ID=FBgn0032721.2.mrna1;geneID=FBgn0032721.2.path1;Name=FBgn0032721.2;Dir=sensecoverage=99.6;identity=98.0;matches=1804;mismatches=36;indels=0;unknowns=0;locus=RLOC_00010116
Chr1	stalkie_big_nohaplotig	exon	110023705	110023875	100	+	.	Parent=FBgn0032721.2.mrna1;Target=FBgn0032721.2 1 171 +
Chr1	stalkie_big_nohaplotig	exon	110023934	110024082	100	+	.	Parent=FBgn0032721.2.mrna1;Target=FBgn0032721.2 172 320 +
Chr1	stalkie_big_nohaplotig	exon	110024216	110024954	100	+	.	Parent=FBgn0032721.2.mrna1;Target=FBgn0032721.2 321 1059 +
Chr1	stalkie_big_nohaplotig	exon	110025030	110025358	100	+	.	Parent=FBgn0032721.2.mrna1;Target=FBgn0032721.2 1060 1388 +
Chr1	stalkie_big_nohaplotig	exon	110025420	110025871	92	+	.	Parent=FBgn0032721.2.mrna1;Target=FBgn0032721.2 1389 1840 +
Chr1	stalkie_big_nohaplotig	CDS	110023705	110023875	.	+	0	Parent=FBgn0032721.2.mrna1;Target=FBgn0032721.2 1 171 +
Chr1	stalkie_big_nohaplotig	CDS	110023934	110024082	.	+	0	Parent=FBgn0032721.2.mrna1;Target=FBgn0032721.2 172 320 +
Chr1	stalkie_big_nohaplotig	CDS	110024216	110024954	.	+	1	Parent=FBgn0032721.2.mrna1;Target=FBgn0032721.2 321 1059 +
Chr1	stalkie_big_nohaplotig	CDS	110025030	110025358	.	+	0	Parent=FBgn0032721.2.mrna1;Target=FBgn0032721.2 1060 1388 +
Chr1	stalkie_big_nohaplotig	CDS	110025420	110025870	.	+	1	Parent=FBgn0032721.2.mrna1;Target=FBgn0032721.2 1389 1839 +
Chr1	gffcl	locus	110126783	110129302	.	+	.	ID=RLOC_00010118;geneIDs=FBgn0035425.1.path1;transcripts=FBgn0035425.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110126783	110129302	.	+	.	ID=FBgn0035425.1.mrna1;geneID=FBgn0035425.1.path1;Name=FBgn0035425.1;Dir=sensecoverage=100.0;identity=99.7;matches=996;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010118
Chr1	stalkie_big_nohaplotig	exon	110126783	110127076	100	+	.	Parent=FBgn0035425.1.mrna1;Target=FBgn0035425.1 1 294 +
Chr1	stalkie_big_nohaplotig	exon	110127138	110127471	99	+	.	Parent=FBgn0035425.1.mrna1;Target=FBgn0035425.1 295 628 +
Chr1	stalkie_big_nohaplotig	exon	110128932	110129302	100	+	.	Parent=FBgn0035425.1.mrna1;Target=FBgn0035425.1 629 999 +
Chr1	stalkie_big_nohaplotig	CDS	110126783	110127076	.	+	0	Parent=FBgn0035425.1.mrna1;Target=FBgn0035425.1 1 294 +
Chr1	stalkie_big_nohaplotig	CDS	110127138	110127471	.	+	0	Parent=FBgn0035425.1.mrna1;Target=FBgn0035425.1 295 628 +
Chr1	stalkie_big_nohaplotig	CDS	110128932	110129302	.	+	2	Parent=FBgn0035425.1.mrna1;Target=FBgn0035425.1 629 999 +
Chr1	gffcl	locus	110132871	110133125	.	-	.	ID=RLOC_00010119;geneIDs=comp116043_c0_seq1.path1;transcripts=comp116043_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110132871	110133125	.	-	.	ID=comp116043_c0_seq1.mrna1;geneID=comp116043_c0_seq1.path1;Name=comp116043_c0_seq1;Dir=indeterminatecoverage=98.5;identity=99.6;matches=254;mismatches=1;indels=0;unknowns=0;Target=comp116043_c0_seq1 259 5 .;CDS_Target=comp116043_c0_seq1 45 7 .;locus=RLOC_00010119
Chr1	stalkie_big_nohaplotig	exon	110132871	110133125	99	-	.	Parent=comp116043_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	110133085	110133123	.	-	0	Parent=comp116043_c0_seq1.mrna1
Chr1	gffcl	locus	110133398	110134060	.	-	.	ID=RLOC_00010120;geneIDs=comp150742_c0_seq1.path1;transcripts=comp150742_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110133398	110134060	.	-	.	ID=comp150742_c0_seq1.mrna1;geneID=comp150742_c0_seq1.path1;Name=comp150742_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=660;mismatches=3;indels=0;unknowns=0;Target=comp150742_c0_seq1 663 1 .;CDS_Target=comp150742_c0_seq1 578 402 .;locus=RLOC_00010120
Chr1	stalkie_big_nohaplotig	exon	110133398	110134060	99	-	.	Parent=comp150742_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	110133483	110133659	.	-	0	Parent=comp150742_c0_seq1.mrna1
Chr1	gffcl	locus	110134145	110134688	.	-	.	ID=RLOC_00010121;geneIDs=comp135995_c0_seq1.path1;transcripts=comp135995_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110134145	110134688	.	-	.	ID=comp135995_c0_seq1.mrna1;geneID=comp135995_c0_seq1.path1;Name=comp135995_c0_seq1;Dir=indeterminatecoverage=97.1;identity=98.3;matches=536;mismatches=8;indels=1;unknowns=0;Target=comp135995_c0_seq1 561 17 .;CDS_Target=comp135995_c0_seq1 46 17 .;locus=RLOC_00010121
Chr1	stalkie_big_nohaplotig	exon	110134145	110134688	98	-	.	Parent=comp135995_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	110134659	110134688	.	-	0	Parent=comp135995_c0_seq1.mrna1
Chr1	gffcl	locus	110138703	110140173	.	-	.	ID=RLOC_00010122;geneIDs=comp159885_c0_seq1.path1;transcripts=comp159885_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110138703	110140173	.	-	.	ID=comp159885_c0_seq1.mrna1;geneID=comp159885_c0_seq1.path1;Name=comp159885_c0_seq1;Dir=indeterminatecoverage=96.2;identity=99.4;matches=1463;mismatches=8;indels=1;unknowns=0;Target=comp159885_c0_seq1 1510 39 .;CDS_Target=comp159885_c0_seq1 1226 1140 .;locus=RLOC_00010122
Chr1	stalkie_big_nohaplotig	exon	110138703	110140173	99	-	.	Parent=comp159885_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	110138986	110139072	.	-	0	Parent=comp159885_c0_seq1.mrna1
Chr1	gffcl	locus	110140642	110143450	.	-	.	ID=RLOC_00010123;geneIDs=comp152680_c0_seq1.path1;transcripts=comp152680_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110140642	110143450	.	-	.	ID=comp152680_c0_seq1.mrna1;geneID=comp152680_c0_seq1.path1;Name=comp152680_c0_seq1;Dir=sensecoverage=99.2;identity=99.3;matches=1341;mismatches=7;indels=2;unknowns=0;Target=comp152680_c0_seq1 970 1113 +;locus=RLOC_00010123
Chr1	stalkie_big_nohaplotig	exon	110140642	110141661	99	-	.	Parent=comp152680_c0_seq1.mrna1;Target=comp152680_c0_seq1 342 1360 +
Chr1	stalkie_big_nohaplotig	exon	110143122	110143450	99	-	.	Parent=comp152680_c0_seq1.mrna1;Target=comp152680_c0_seq1 12 341 +
Chr1	stalkie_big_nohaplotig	CDS	110140889	110141032	.	-	0	Parent=comp152680_c0_seq1.mrna1
Chr1	gffcl	locus	110164043	110164921	.	+	.	ID=RLOC_00010125;geneIDs=ORF2685.path1;transcripts=ORF2685.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110164043	110164921	.	+	.	ID=ORF2685.mrna1;geneID=ORF2685.path1;Name=ORF2685;Dir=sensecoverage=100.0;identity=100.0;matches=822;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010125
Chr1	stalkie_big_nohaplotig	exon	110164043	110164231	100	+	.	Parent=ORF2685.mrna1;Target=ORF2685 1 189 +
Chr1	stalkie_big_nohaplotig	exon	110164289	110164921	100	+	.	Parent=ORF2685.mrna1;Target=ORF2685 190 822 +
Chr1	stalkie_big_nohaplotig	CDS	110164043	110164231	.	+	0	Parent=ORF2685.mrna1;Target=ORF2685 1 189 +
Chr1	stalkie_big_nohaplotig	CDS	110164289	110164921	.	+	0	Parent=ORF2685.mrna1;Target=ORF2685 190 822 +
Chr1	gffcl	locus	110164930	110175275	.	+	.	ID=RLOC_00010126;geneIDs=comp611597_c0_seq1.path1;transcripts=comp611597_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110164930	110175275	.	+	.	ID=comp611597_c0_seq1.mrna1;geneID=comp611597_c0_seq1.path1;Name=comp611597_c0_seq1;Dir=sensecoverage=100.0;identity=97.4;matches=1403;mismatches=18;indels=20;unknowns=0;locus=RLOC_00010126
Chr1	stalkie_big_nohaplotig	exon	110164930	110164953	100	+	.	Parent=comp611597_c0_seq1.mrna1;Target=comp611597_c0_seq1 1 24 +
Chr1	stalkie_big_nohaplotig	exon	110173879	110175275	97	+	.	Parent=comp611597_c0_seq1.mrna1;Target=comp611597_c0_seq1 25 1441 +
Chr1	stalkie_big_nohaplotig	CDS	110164931	110164953	.	+	0	Parent=comp611597_c0_seq1.mrna1;Target=comp611597_c0_seq1 2 24 +
Chr1	stalkie_big_nohaplotig	CDS	110173879	110173975	.	+	1	Parent=comp611597_c0_seq1.mrna1;Target=comp611597_c0_seq1 25 121 +
Chr1	gffcl	locus	110166430	110171736	.	+	.	ID=RLOC_00010127;geneIDs=comp137144_c0_seq1.path1;transcripts=comp137144_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110166430	110171736	.	+	.	ID=comp137144_c0_seq1.mrna1;geneID=comp137144_c0_seq1.path1;Name=comp137144_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=673;mismatches=8;indels=0;unknowns=0;locus=RLOC_00010127
Chr1	stalkie_big_nohaplotig	exon	110166430	110166531	100	+	.	Parent=comp137144_c0_seq1.mrna1;Target=comp137144_c0_seq1 102 1 .
Chr1	stalkie_big_nohaplotig	exon	110171158	110171736	98	+	.	Parent=comp137144_c0_seq1.mrna1;Target=comp137144_c0_seq1 681 103 .
Chr1	stalkie_big_nohaplotig	CDS	110166432	110166531	.	+	0	Parent=comp137144_c0_seq1.mrna1;Target=comp137144_c0_seq1 102 3 .
Chr1	stalkie_big_nohaplotig	CDS	110171158	110171201	.	+	2	Parent=comp137144_c0_seq1.mrna1;Target=comp137144_c0_seq1 146 103 .
Chr1	gffcl	locus	110193104	110193931	.	+	.	ID=RLOC_00010128;geneIDs=comp135264_c0_seq1.path1;transcripts=comp135264_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110193104	110193931	.	+	.	ID=comp135264_c0_seq1.mrna1;geneID=comp135264_c0_seq1.path1;Name=comp135264_c0_seq1;Dir=antisensecoverage=86.8;identity=99.6;matches=732;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010128
Chr1	stalkie_big_nohaplotig	exon	110193104	110193403	100	+	.	Parent=comp135264_c0_seq1.mrna1;Target=comp135264_c0_seq1 547 846 -
Chr1	stalkie_big_nohaplotig	exon	110193497	110193931	99	+	.	Parent=comp135264_c0_seq1.mrna1;Target=comp135264_c0_seq1 112 546 -
Chr1	stalkie_big_nohaplotig	CDS	110193307	110193403	.	+	0	Parent=comp135264_c0_seq1.mrna1;Target=comp135264_c0_seq1 547 643 .
Chr1	stalkie_big_nohaplotig	CDS	110193497	110193834	.	+	2	Parent=comp135264_c0_seq1.mrna1;Target=comp135264_c0_seq1 209 546 .
Chr1	gffcl	locus	110217103	110217663	.	+	.	ID=RLOC_00010129;geneIDs=comp137747_c0_seq1.path1;transcripts=comp137747_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110217103	110217663	.	+	.	ID=comp137747_c0_seq1.mrna1;geneID=comp137747_c0_seq1.path1;Name=comp137747_c0_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=482;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010129
Chr1	stalkie_big_nohaplotig	exon	110217103	110217246	99	+	.	Parent=comp137747_c0_seq1.mrna1;Target=comp137747_c0_seq1 1 144 +
Chr1	stalkie_big_nohaplotig	exon	110217323	110217663	99	+	.	Parent=comp137747_c0_seq1.mrna1;Target=comp137747_c0_seq1 145 485 +
Chr1	stalkie_big_nohaplotig	CDS	110217132	110217246	.	+	0	Parent=comp137747_c0_seq1.mrna1;Target=comp137747_c0_seq1 30 144 +
Chr1	stalkie_big_nohaplotig	CDS	110217323	110217663	.	+	2	Parent=comp137747_c0_seq1.mrna1;Target=comp137747_c0_seq1 145 485 +
Chr1	gffcl	locus	110217837	110218363	.	+	.	ID=RLOC_00010130;geneIDs=comp153302_c0_seq1.path1;transcripts=comp153302_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110217837	110218363	.	+	.	ID=comp153302_c0_seq1.mrna1;geneID=comp153302_c0_seq1.path1;Name=comp153302_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=518;mismatches=9;indels=0;unknowns=0;Target=comp153302_c0_seq1 527 1 .;CDS_Target=comp153302_c0_seq1 457 2 .;locus=RLOC_00010130
Chr1	stalkie_big_nohaplotig	exon	110217837	110218363	98	+	.	Parent=comp153302_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	110217838	110218293	.	+	0	Parent=comp153302_c0_seq1.mrna1
Chr1	gffcl	locus	110234729	110243465	.	+	.	ID=RLOC_00010131;geneIDs=comp161029_c0_seq1.path1;transcripts=comp161029_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110234729	110243465	.	+	.	ID=comp161029_c0_seq1.mrna1;geneID=comp161029_c0_seq1.path1;Name=comp161029_c0_seq1;Dir=indeterminatecoverage=100.0;identity=87.1;matches=660;mismatches=70;indels=28;unknowns=0;Target=comp161029_c0_seq1 185 87 .;locus=RLOC_00010131
Chr1	stalkie_big_nohaplotig	exon	110234729	110234776	82	+	.	Parent=comp161029_c0_seq1.mrna1;Target=comp161029_c0_seq1 48 1 .
Chr1	stalkie_big_nohaplotig	exon	110242769	110243465	87	+	.	Parent=comp161029_c0_seq1.mrna1;Target=comp161029_c0_seq1 743 49 .
Chr1	stalkie_big_nohaplotig	CDS	110242806	110242904	.	+	0	Parent=comp161029_c0_seq1.mrna1
Chr1	gffcl	locus	110306711	110600082	.	+	.	ID=RLOC_00010132;geneIDs=FBgn0004598.1.path1,comp163778_c1_seq1.path1;transcripts=comp163778_c1_seq1.mrna1,FBgn0004598.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110306711	110600082	.	+	.	ID=comp163778_c1_seq1.mrna1;geneID=comp163778_c1_seq1.path1;Name=comp163778_c1_seq1;Dir=sensecoverage=97.7;identity=98.1;matches=6392;mismatches=57;indels=67;unknowns=0;locus=RLOC_00010132
Chr1	stalkie_big_nohaplotig	exon	110306711	110306724	85	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 143 156 +
Chr1	stalkie_big_nohaplotig	exon	110312562	110312567	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 157 162 +
Chr1	stalkie_big_nohaplotig	exon	110359730	110359735	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 163 168 +
Chr1	stalkie_big_nohaplotig	exon	110361515	110361519	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 169 173 +
Chr1	stalkie_big_nohaplotig	exon	110366135	110366138	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 174 177 +
Chr1	stalkie_big_nohaplotig	exon	110370609	110370610	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 178 179 +
Chr1	stalkie_big_nohaplotig	exon	110377148	110377155	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 180 187 +
Chr1	stalkie_big_nohaplotig	exon	110399606	110399634	59	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 188 234 +
Chr1	stalkie_big_nohaplotig	exon	110411387	110411388	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 235 236 +
Chr1	stalkie_big_nohaplotig	exon	110411555	110411569	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 237 251 +
Chr1	stalkie_big_nohaplotig	exon	110412222	110412230	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 252 260 +
Chr1	stalkie_big_nohaplotig	exon	110415736	110415739	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 331 334 +
Chr1	stalkie_big_nohaplotig	exon	110416439	110416440	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 394 395 +
Chr1	stalkie_big_nohaplotig	exon	110418884	110418891	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 396 403 +
Chr1	stalkie_big_nohaplotig	exon	110420079	110420088	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 404 413 +
Chr1	stalkie_big_nohaplotig	exon	110423193	110423200	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 414 421 +
Chr1	stalkie_big_nohaplotig	exon	110431386	110431402	82	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 422 438 +
Chr1	stalkie_big_nohaplotig	exon	110441847	110441855	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 521 529 +
Chr1	stalkie_big_nohaplotig	exon	110441868	110441915	44	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 579 618 +
Chr1	stalkie_big_nohaplotig	exon	110445494	110445495	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 620 621 +
Chr1	stalkie_big_nohaplotig	exon	110449215	110449225	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 622 632 +
Chr1	stalkie_big_nohaplotig	exon	110450843	110450851	46	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 643 655 +
Chr1	stalkie_big_nohaplotig	exon	110459188	110459190	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 720 722 +
Chr1	stalkie_big_nohaplotig	exon	110461181	110461191	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 723 733 +
Chr1	stalkie_big_nohaplotig	exon	110464321	110464386	87	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 998 1068 +
Chr1	stalkie_big_nohaplotig	exon	110474896	110474924	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 1069 1097 +
Chr1	stalkie_big_nohaplotig	exon	110488717	110489904	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 1098 2285 +
Chr1	stalkie_big_nohaplotig	exon	110494997	110495052	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 2286 2341 +
Chr1	stalkie_big_nohaplotig	exon	110517082	110517186	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 2342 2446 +
Chr1	stalkie_big_nohaplotig	exon	110518194	110518442	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 2447 2695 +
Chr1	stalkie_big_nohaplotig	exon	110526802	110526936	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 2696 2830 +
Chr1	stalkie_big_nohaplotig	exon	110539823	110539982	99	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 2831 2990 +
Chr1	stalkie_big_nohaplotig	exon	110546978	110547281	99	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 2991 3294 +
Chr1	stalkie_big_nohaplotig	exon	110548871	110550031	99	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 3295 4455 +
Chr1	stalkie_big_nohaplotig	exon	110551008	110551195	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 4456 4643 +
Chr1	stalkie_big_nohaplotig	exon	110551285	110551441	99	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 4644 4800 +
Chr1	stalkie_big_nohaplotig	exon	110575243	110575517	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 4801 5075 +
Chr1	stalkie_big_nohaplotig	exon	110582721	110582997	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 5076 5352 +
Chr1	stalkie_big_nohaplotig	exon	110583616	110583815	100	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 5353 5552 +
Chr1	stalkie_big_nohaplotig	exon	110584848	110585126	99	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 5553 5831 +
Chr1	stalkie_big_nohaplotig	exon	110585191	110585426	99	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 5832 6067 +
Chr1	stalkie_big_nohaplotig	exon	110598927	110600082	96	+	.	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 6068 7239 +
Chr1	stalkie_big_nohaplotig	CDS	110488968	110489904	.	+	0	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 1349 2285 +
Chr1	stalkie_big_nohaplotig	CDS	110494997	110495052	.	+	2	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 2286 2341 +
Chr1	stalkie_big_nohaplotig	CDS	110517082	110517186	.	+	0	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 2342 2446 +
Chr1	stalkie_big_nohaplotig	CDS	110518194	110518442	.	+	0	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 2447 2695 +
Chr1	stalkie_big_nohaplotig	CDS	110526802	110526936	.	+	0	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 2696 2830 +
Chr1	stalkie_big_nohaplotig	CDS	110539823	110539982	.	+	0	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 2831 2990 +
Chr1	stalkie_big_nohaplotig	CDS	110546978	110547281	.	+	2	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 2991 3294 +
Chr1	stalkie_big_nohaplotig	CDS	110548871	110550031	.	+	1	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 3295 4455 +
Chr1	stalkie_big_nohaplotig	CDS	110551008	110551195	.	+	1	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 4456 4643 +
Chr1	stalkie_big_nohaplotig	CDS	110551285	110551441	.	+	2	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 4644 4800 +
Chr1	stalkie_big_nohaplotig	CDS	110575243	110575517	.	+	1	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 4801 5075 +
Chr1	stalkie_big_nohaplotig	CDS	110582721	110582997	.	+	2	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 5076 5352 +
Chr1	stalkie_big_nohaplotig	CDS	110583616	110583815	.	+	1	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 5353 5552 +
Chr1	stalkie_big_nohaplotig	CDS	110584848	110585126	.	+	2	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 5553 5831 +
Chr1	stalkie_big_nohaplotig	CDS	110585191	110585426	.	+	2	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 5832 6067 +
Chr1	stalkie_big_nohaplotig	CDS	110598927	110599376	.	+	0	Parent=comp163778_c1_seq1.mrna1;Target=comp163778_c1_seq1 6068 6517 +
Chr1	stalkie_big_nohaplotig	mRNA	110488893	110585426	.	+	.	ID=FBgn0004598.1.mrna1;geneID=FBgn0004598.1.path1;Name=FBgn0004598.1;Dir=sensecoverage=91.5;identity=99.6;matches=4777;mismatches=17;indels=0;unknowns=0;locus=RLOC_00010132
Chr1	stalkie_big_nohaplotig	exon	110488893	110489960	100	+	.	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 1 1068 +
Chr1	stalkie_big_nohaplotig	exon	110517082	110517186	100	+	.	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 1069 1173 +
Chr1	stalkie_big_nohaplotig	exon	110518194	110518442	100	+	.	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 1174 1422 +
Chr1	stalkie_big_nohaplotig	exon	110526802	110526936	100	+	.	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 1423 1557 +
Chr1	stalkie_big_nohaplotig	exon	110539823	110539982	99	+	.	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 1558 1717 +
Chr1	stalkie_big_nohaplotig	exon	110546978	110547281	99	+	.	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 1718 2021 +
Chr1	stalkie_big_nohaplotig	exon	110548871	110550031	99	+	.	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 2022 3182 +
Chr1	stalkie_big_nohaplotig	exon	110551008	110551195	100	+	.	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 3183 3370 +
Chr1	stalkie_big_nohaplotig	exon	110551285	110551441	99	+	.	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 3371 3527 +
Chr1	stalkie_big_nohaplotig	exon	110575243	110575517	100	+	.	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 3528 3802 +
Chr1	stalkie_big_nohaplotig	exon	110582721	110582997	100	+	.	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 3803 4079 +
Chr1	stalkie_big_nohaplotig	exon	110583616	110583815	100	+	.	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 4080 4279 +
Chr1	stalkie_big_nohaplotig	exon	110584848	110585126	99	+	.	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 4280 4558 +
Chr1	stalkie_big_nohaplotig	exon	110585191	110585426	99	+	.	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 4559 4794 +
Chr1	stalkie_big_nohaplotig	CDS	110488893	110489960	.	+	0	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 1 1068 +
Chr1	stalkie_big_nohaplotig	CDS	110517082	110517186	.	+	0	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 1069 1173 +
Chr1	stalkie_big_nohaplotig	CDS	110518194	110518442	.	+	0	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 1174 1422 +
Chr1	stalkie_big_nohaplotig	CDS	110526802	110526936	.	+	0	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 1423 1557 +
Chr1	stalkie_big_nohaplotig	CDS	110539823	110539982	.	+	0	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 1558 1717 +
Chr1	stalkie_big_nohaplotig	CDS	110546978	110547281	.	+	2	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 1718 2021 +
Chr1	stalkie_big_nohaplotig	CDS	110548871	110550031	.	+	1	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 2022 3182 +
Chr1	stalkie_big_nohaplotig	CDS	110551008	110551195	.	+	1	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 3183 3370 +
Chr1	stalkie_big_nohaplotig	CDS	110551285	110551441	.	+	2	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 3371 3527 +
Chr1	stalkie_big_nohaplotig	CDS	110575243	110575517	.	+	1	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 3528 3802 +
Chr1	stalkie_big_nohaplotig	CDS	110582721	110582997	.	+	2	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 3803 4079 +
Chr1	stalkie_big_nohaplotig	CDS	110583616	110583815	.	+	1	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 4080 4279 +
Chr1	stalkie_big_nohaplotig	CDS	110584848	110585126	.	+	2	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 4280 4558 +
Chr1	stalkie_big_nohaplotig	CDS	110585191	110585426	.	+	2	Parent=FBgn0004598.1.mrna1;Target=FBgn0004598.1 4559 4794 +
Chr1	gffcl	locus	110602337	110602545	.	-	.	ID=RLOC_00010133;geneIDs=comp116920_c0_seq1.path1;transcripts=comp116920_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110602337	110602545	.	-	.	ID=comp116920_c0_seq1.mrna1;geneID=comp116920_c0_seq1.path1;Name=comp116920_c0_seq1;Dir=indeterminatecoverage=95.4;identity=100.0;matches=209;mismatches=0;indels=0;unknowns=0;Target=comp116920_c0_seq1 209 1 .;CDS_Target=comp116920_c0_seq1 169 2 .;locus=RLOC_00010133
Chr1	stalkie_big_nohaplotig	exon	110602337	110602545	100	-	.	Parent=comp116920_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	110602377	110602544	.	-	0	Parent=comp116920_c0_seq1.mrna1
Chr1	gffcl	locus	110627345	110627773	.	-	.	ID=RLOC_00010134;geneIDs=comp121512_c0_seq1.path1;transcripts=comp121512_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110627345	110627773	.	-	.	ID=comp121512_c0_seq1.mrna1;geneID=comp121512_c0_seq1.path1;Name=comp121512_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.9;matches=403;mismatches=11;indels=15;unknowns=0;Target=comp121512_c0_seq1 414 1 .;CDS_Target=comp121512_c0_seq1 253 2 .;locus=RLOC_00010134
Chr1	stalkie_big_nohaplotig	exon	110627345	110627773	93	-	.	Parent=comp121512_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	110627506	110627772	.	-	0	Parent=comp121512_c0_seq1.mrna1
Chr1	gffcl	locus	110666571	110668578	.	+	.	ID=RLOC_00010135;geneIDs=comp157620_c0_seq1.path1;transcripts=comp157620_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110666571	110668578	.	+	.	ID=comp157620_c0_seq1.mrna1;geneID=comp157620_c0_seq1.path1;Name=comp157620_c0_seq1;Dir=antisensecoverage=99.0;identity=94.3;matches=1814;mismatches=26;indels=84;unknowns=0;locus=RLOC_00010135
Chr1	stalkie_big_nohaplotig	exon	110666571	110666635	98	+	.	Parent=comp157620_c0_seq1.mrna1;Target=comp157620_c0_seq1 1798 1862 -
Chr1	stalkie_big_nohaplotig	exon	110666690	110666845	99	+	.	Parent=comp157620_c0_seq1.mrna1;Target=comp157620_c0_seq1 1642 1797 -
Chr1	stalkie_big_nohaplotig	exon	110666897	110668578	93	+	.	Parent=comp157620_c0_seq1.mrna1;Target=comp157620_c0_seq1 2 1641 -
Chr1	stalkie_big_nohaplotig	CDS	110666572	110666635	.	+	0	Parent=comp157620_c0_seq1.mrna1;Target=comp157620_c0_seq1 1798 1861 .
Chr1	stalkie_big_nohaplotig	CDS	110666690	110666845	.	+	2	Parent=comp157620_c0_seq1.mrna1;Target=comp157620_c0_seq1 1642 1797 .
Chr1	stalkie_big_nohaplotig	CDS	110666897	110667222	.	+	2	Parent=comp157620_c0_seq1.mrna1;Target=comp157620_c0_seq1 1367 1641 .
Chr1	gffcl	locus	110705311	110706975	.	-	.	ID=RLOC_00010136;geneIDs=FBgn0039070.2.path1;transcripts=FBgn0039070.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110705311	110706975	.	-	.	ID=FBgn0039070.2.mrna1;geneID=FBgn0039070.2.path1;Name=FBgn0039070.2;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1653;mismatches=12;indels=0;unknowns=0;Target=FBgn0039070.2 1665 1 .;locus=RLOC_00010136
Chr1	stalkie_big_nohaplotig	exon	110705311	110706975	99	-	.	Parent=FBgn0039070.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	110705311	110706975	.	-	0	Parent=FBgn0039070.2.mrna1
Chr1	gffcl	locus	110707039	110708788	.	+	.	ID=RLOC_00010137;geneIDs=comp159213_c0_seq1.path1;transcripts=comp159213_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110707039	110708788	.	+	.	ID=comp159213_c0_seq1.mrna1;geneID=comp159213_c0_seq1.path1;Name=comp159213_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1748;mismatches=2;indels=0;unknowns=0;Target=comp159213_c0_seq1 1750 1 .;CDS_Target=comp159213_c0_seq1 612 457 .;locus=RLOC_00010137
Chr1	stalkie_big_nohaplotig	exon	110707039	110708788	99	+	.	Parent=comp159213_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	110707495	110707650	.	+	0	Parent=comp159213_c0_seq1.mrna1
Chr1	gffcl	locus	110731869	110732593	.	+	.	ID=RLOC_00010139;geneIDs=comp150357_c0_seq1.path1;transcripts=comp150357_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110731869	110732593	.	+	.	ID=comp150357_c0_seq1.mrna1;geneID=comp150357_c0_seq1.path1;Name=comp150357_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=647;mismatches=5;indels=1;unknowns=0;Target=comp150357_c0_seq1 68 3 .;locus=RLOC_00010139
Chr1	stalkie_big_nohaplotig	exon	110731869	110732481	99	+	.	Parent=comp150357_c0_seq1.mrna1;Target=comp150357_c0_seq1 614 1 .
Chr1	stalkie_big_nohaplotig	exon	110732555	110732593	100	+	.	Parent=comp150357_c0_seq1.mrna1;Target=comp150357_c0_seq1 669 631 .
Chr1	stalkie_big_nohaplotig	CDS	110731871	110731936	.	+	0	Parent=comp150357_c0_seq1.mrna1
Chr1	gffcl	locus	110786423	110787121	.	-	.	ID=RLOC_00010140;geneIDs=Dv_FBgn0209813.1.path4;transcripts=Dv_FBgn0209813.1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	110786423	110787121	.	-	.	ID=Dv_FBgn0209813.1.mrna4;geneID=Dv_FBgn0209813.1.path4;Name=Dv_FBgn0209813.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=697;mismatches=2;indels=0;unknowns=0;Target=Dv_FBgn0209813.1 699 1 .;locus=RLOC_00010140
Chr1	stalkie_big_nohaplotig	exon	110786423	110787121	99	-	.	Parent=Dv_FBgn0209813.1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	110786423	110787121	.	-	0	Parent=Dv_FBgn0209813.1.mrna4
Chr1	gffcl	locus	110792738	110878161	.	-	.	ID=RLOC_00010142;geneIDs=comp150639_c0_seq1.path1;transcripts=comp150639_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110792738	110878161	.	-	.	ID=comp150639_c0_seq1.mrna1;geneID=comp150639_c0_seq1.path1;Name=comp150639_c0_seq1;Dir=sensecoverage=99.6;identity=96.5;matches=1961;mismatches=70;indels=1;unknowns=0;locus=RLOC_00010142
Chr1	stalkie_big_nohaplotig	exon	110792738	110793378	99	-	.	Parent=comp150639_c0_seq1.mrna1;Target=comp150639_c0_seq1 1432 2072 +
Chr1	stalkie_big_nohaplotig	exon	110802865	110802914	86	-	.	Parent=comp150639_c0_seq1.mrna1;Target=comp150639_c0_seq1 1382 1431 +
Chr1	stalkie_big_nohaplotig	exon	110809193	110809198	100	-	.	Parent=comp150639_c0_seq1.mrna1;Target=comp150639_c0_seq1 1376 1381 +
Chr1	stalkie_big_nohaplotig	exon	110809210	110809223	100	-	.	Parent=comp150639_c0_seq1.mrna1;Target=comp150639_c0_seq1 1324 1337 +
Chr1	stalkie_big_nohaplotig	exon	110816572	110816577	100	-	.	Parent=comp150639_c0_seq1.mrna1;Target=comp150639_c0_seq1 1318 1323 +
Chr1	stalkie_big_nohaplotig	exon	110817016	110817057	66	-	.	Parent=comp150639_c0_seq1.mrna1;Target=comp150639_c0_seq1 1276 1317 +
Chr1	stalkie_big_nohaplotig	exon	110876890	110878161	96	-	.	Parent=comp150639_c0_seq1.mrna1;Target=comp150639_c0_seq1 3 1275 +
Chr1	stalkie_big_nohaplotig	CDS	110793166	110793378	.	-	2	Parent=comp150639_c0_seq1.mrna1;Target=comp150639_c0_seq1 1432 1644 +
Chr1	stalkie_big_nohaplotig	CDS	110802865	110802914	.	-	1	Parent=comp150639_c0_seq1.mrna1;Target=comp150639_c0_seq1 1382 1431 +
Chr1	stalkie_big_nohaplotig	CDS	110809193	110809198	.	-	1	Parent=comp150639_c0_seq1.mrna1;Target=comp150639_c0_seq1 1376 1381 +
Chr1	stalkie_big_nohaplotig	CDS	110809210	110809223	.	-	0	Parent=comp150639_c0_seq1.mrna1;Target=comp150639_c0_seq1 1324 1337 +
Chr1	stalkie_big_nohaplotig	CDS	110816572	110816577	.	-	0	Parent=comp150639_c0_seq1.mrna1;Target=comp150639_c0_seq1 1318 1323 +
Chr1	stalkie_big_nohaplotig	CDS	110817016	110817033	.	-	0	Parent=comp150639_c0_seq1.mrna1;Target=comp150639_c0_seq1 1300 1317 +
Chr1	gffcl	locus	110820386	110918937	.	-	.	ID=RLOC_00010143;geneIDs=comp154316_c0_seq1.path1;transcripts=comp154316_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110820386	110918937	.	-	.	ID=comp154316_c0_seq1.mrna1;geneID=comp154316_c0_seq1.path1;Name=comp154316_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.5;matches=696;mismatches=27;indels=6;unknowns=0;locus=RLOC_00010143
Chr1	stalkie_big_nohaplotig	exon	110820386	110820925	95	-	.	Parent=comp154316_c0_seq1.mrna1;Target=comp154316_c0_seq1 725 188 .
Chr1	stalkie_big_nohaplotig	exon	110918751	110918937	95	-	.	Parent=comp154316_c0_seq1.mrna1;Target=comp154316_c0_seq1 187 1 .
Chr1	stalkie_big_nohaplotig	CDS	110820844	110820925	.	-	2	Parent=comp154316_c0_seq1.mrna1;Target=comp154316_c0_seq1 267 188 .
Chr1	stalkie_big_nohaplotig	CDS	110918751	110918850	.	-	0	Parent=comp154316_c0_seq1.mrna1;Target=comp154316_c0_seq1 187 88 .
Chr1	gffcl	locus	110841546	110842017	.	+	.	ID=RLOC_00010144;geneIDs=comp150885_c0_seq1.path1;transcripts=comp150885_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110841546	110842017	.	+	.	ID=comp150885_c0_seq1.mrna1;geneID=comp150885_c0_seq1.path1;Name=comp150885_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=472;mismatches=0;indels=0;unknowns=0;Target=comp150885_c0_seq1 472 1 .;CDS_Target=comp150885_c0_seq1 471 97 .;locus=RLOC_00010144
Chr1	stalkie_big_nohaplotig	exon	110841546	110842017	100	+	.	Parent=comp150885_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	110841642	110842016	.	+	0	Parent=comp150885_c0_seq1.mrna1
Chr1	gffcl	locus	110849458	110858988	.	-	.	ID=RLOC_00010145;geneIDs=comp160927_c0_seq1.path1;transcripts=comp160927_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110849458	110858988	.	-	.	ID=comp160927_c0_seq1.mrna1;geneID=comp160927_c0_seq1.path1;Name=comp160927_c0_seq1;Dir=indeterminatecoverage=73.9;identity=98.6;matches=500;mismatches=7;indels=0;unknowns=0;locus=RLOC_00010145
Chr1	stalkie_big_nohaplotig	exon	110849458	110849766	97	-	.	Parent=comp160927_c0_seq1.mrna1;Target=comp160927_c0_seq1 686 378 .
Chr1	stalkie_big_nohaplotig	exon	110858791	110858988	100	-	.	Parent=comp160927_c0_seq1.mrna1;Target=comp160927_c0_seq1 377 180 .
Chr1	stalkie_big_nohaplotig	CDS	110849643	110849766	.	-	1	Parent=comp160927_c0_seq1.mrna1;Target=comp160927_c0_seq1 501 378 .
Chr1	stalkie_big_nohaplotig	CDS	110858791	110858987	.	-	0	Parent=comp160927_c0_seq1.mrna1;Target=comp160927_c0_seq1 377 181 .
Chr1	gffcl	locus	110866887	110867611	.	+	.	ID=RLOC_00010146;geneIDs=comp150357_c0_seq1.path2;transcripts=comp150357_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	110866887	110867611	.	+	.	ID=comp150357_c0_seq1.mrna2;geneID=comp150357_c0_seq1.path2;Name=comp150357_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=647;mismatches=5;indels=1;unknowns=0;Target=comp150357_c0_seq1 68 3 .;locus=RLOC_00010146
Chr1	stalkie_big_nohaplotig	exon	110866887	110867499	99	+	.	Parent=comp150357_c0_seq1.mrna2;Target=comp150357_c0_seq1 614 1 .
Chr1	stalkie_big_nohaplotig	exon	110867573	110867611	100	+	.	Parent=comp150357_c0_seq1.mrna2;Target=comp150357_c0_seq1 669 631 .
Chr1	stalkie_big_nohaplotig	CDS	110866889	110866954	.	+	0	Parent=comp150357_c0_seq1.mrna2
Chr1	gffcl	locus	110888532	110890966	.	-	.	ID=RLOC_00010147;geneIDs=comp162560_c0_seq1.path2;transcripts=comp162560_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	110888532	110890966	.	-	.	ID=comp162560_c0_seq1.mrna2;geneID=comp162560_c0_seq1.path2;Name=comp162560_c0_seq1;Dir=indeterminatecoverage=92.2;identity=99.6;matches=2426;mismatches=9;indels=1;unknowns=0;Target=comp162560_c0_seq1 2642 207 .;CDS_Target=comp162560_c0_seq1 1983 1468 .;locus=RLOC_00010147
Chr1	stalkie_big_nohaplotig	exon	110888532	110890966	99	-	.	Parent=comp162560_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	110889191	110889706	.	-	0	Parent=comp162560_c0_seq1.mrna2
Chr1	gffcl	locus	110904304	110904812	.	+	.	ID=RLOC_00010148;geneIDs=comp135274_c0_seq1.path1;transcripts=comp135274_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110904304	110904812	.	+	.	ID=comp135274_c0_seq1.mrna1;geneID=comp135274_c0_seq1.path1;Name=comp135274_c0_seq1;Dir=antisensecoverage=95.7;identity=99.3;matches=446;mismatches=1;indels=2;unknowns=0;locus=RLOC_00010148
Chr1	stalkie_big_nohaplotig	exon	110904304	110904433	98	+	.	Parent=comp135274_c0_seq1.mrna1;Target=comp135274_c0_seq1 338 469 -
Chr1	stalkie_big_nohaplotig	exon	110904496	110904812	99	+	.	Parent=comp135274_c0_seq1.mrna1;Target=comp135274_c0_seq1 21 337 -
Chr1	stalkie_big_nohaplotig	CDS	110904379	110904433	.	+	0	Parent=comp135274_c0_seq1.mrna1;Target=comp135274_c0_seq1 338 392 .
Chr1	stalkie_big_nohaplotig	CDS	110904496	110904689	.	+	2	Parent=comp135274_c0_seq1.mrna1;Target=comp135274_c0_seq1 144 337 .
Chr1	gffcl	locus	110909509	110909970	.	+	.	ID=RLOC_00010149;geneIDs=comp65450_c0_seq1.path1;transcripts=comp65450_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110909509	110909970	.	+	.	ID=comp65450_c0_seq1.mrna1;geneID=comp65450_c0_seq1.path1;Name=comp65450_c0_seq1;Dir=antisensecoverage=99.5;identity=98.8;matches=400;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010149
Chr1	stalkie_big_nohaplotig	exon	110909509	110909613	100	+	.	Parent=comp65450_c0_seq1.mrna1;Target=comp65450_c0_seq1 302 406 -
Chr1	stalkie_big_nohaplotig	exon	110909671	110909970	98	+	.	Parent=comp65450_c0_seq1.mrna1;Target=comp65450_c0_seq1 2 301 -
Chr1	stalkie_big_nohaplotig	CDS	110909559	110909613	.	+	0	Parent=comp65450_c0_seq1.mrna1;Target=comp65450_c0_seq1 302 356 .
Chr1	stalkie_big_nohaplotig	CDS	110909671	110909864	.	+	2	Parent=comp65450_c0_seq1.mrna1;Target=comp65450_c0_seq1 108 301 .
Chr1	gffcl	locus	110910750	110911368	.	+	.	ID=RLOC_00010150;geneIDs=comp114359_c0_seq1.path1;transcripts=comp114359_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110910750	110911368	.	+	.	ID=comp114359_c0_seq1.mrna1;geneID=comp114359_c0_seq1.path1;Name=comp114359_c0_seq1;Dir=antisensecoverage=96.2;identity=97.5;matches=551;mismatches=10;indels=4;unknowns=0;locus=RLOC_00010150
Chr1	stalkie_big_nohaplotig	exon	110910750	110910850	100	+	.	Parent=comp114359_c0_seq1.mrna1;Target=comp114359_c0_seq1 464 564 -
Chr1	stalkie_big_nohaplotig	exon	110910908	110911368	96	+	.	Parent=comp114359_c0_seq1.mrna1;Target=comp114359_c0_seq1 1 463 -
Chr1	stalkie_big_nohaplotig	CDS	110910796	110910850	.	+	0	Parent=comp114359_c0_seq1.mrna1;Target=comp114359_c0_seq1 464 518 .
Chr1	stalkie_big_nohaplotig	CDS	110910908	110911099	.	+	2	Parent=comp114359_c0_seq1.mrna1;Target=comp114359_c0_seq1 270 463 .
Chr1	gffcl	locus	110921163	110922566	.	-	.	ID=RLOC_00010151;geneIDs=comp155804_c2_seq1.path1;transcripts=comp155804_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110921163	110922566	.	-	.	ID=comp155804_c2_seq1.mrna1;geneID=comp155804_c2_seq1.path1;Name=comp155804_c2_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1404;mismatches=0;indels=0;unknowns=0;Target=comp155804_c2_seq1 1404 1 .;CDS_Target=comp155804_c2_seq1 619 302 .;locus=RLOC_00010151
Chr1	stalkie_big_nohaplotig	exon	110921163	110922566	100	-	.	Parent=comp155804_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	110921948	110922265	.	-	0	Parent=comp155804_c2_seq1.mrna1
Chr1	gffcl	locus	110927563	110928029	.	-	.	ID=RLOC_00010152;geneIDs=comp122363_c0_seq1.path1;transcripts=comp122363_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110927563	110928029	.	-	.	ID=comp122363_c0_seq1.mrna1;geneID=comp122363_c0_seq1.path1;Name=comp122363_c0_seq1;Dir=antisensecoverage=93.8;identity=99.0;matches=402;mismatches=3;indels=1;unknowns=0;locus=RLOC_00010152
Chr1	stalkie_big_nohaplotig	exon	110927563	110927867	100	-	.	Parent=comp122363_c0_seq1.mrna1;Target=comp122363_c0_seq1 19 323 -
Chr1	stalkie_big_nohaplotig	exon	110927929	110928029	96	-	.	Parent=comp122363_c0_seq1.mrna1;Target=comp122363_c0_seq1 324 423 -
Chr1	stalkie_big_nohaplotig	CDS	110927671	110927867	.	-	2	Parent=comp122363_c0_seq1.mrna1;Target=comp122363_c0_seq1 127 323 .
Chr1	stalkie_big_nohaplotig	CDS	110927929	110927989	.	-	0	Parent=comp122363_c0_seq1.mrna1;Target=comp122363_c0_seq1 324 384 .
Chr1	gffcl	locus	110943230	110945334	.	-	.	ID=RLOC_00010153;geneIDs=ORF365.path1;transcripts=ORF365.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110943230	110945334	.	-	.	ID=ORF365.mrna1;geneID=ORF365.path1;Name=ORF365;Dir=sensecoverage=100.0;identity=98.4;matches=1924;mismatches=32;indels=0;unknowns=0;locus=RLOC_00010153
Chr1	stalkie_big_nohaplotig	exon	110943230	110943723	99	-	.	Parent=ORF365.mrna1;Target=ORF365 1463 1956 +
Chr1	stalkie_big_nohaplotig	exon	110943736	110944335	98	-	.	Parent=ORF365.mrna1;Target=ORF365 863 1462 +
Chr1	stalkie_big_nohaplotig	exon	110944401	110945138	97	-	.	Parent=ORF365.mrna1;Target=ORF365 125 862 +
Chr1	stalkie_big_nohaplotig	exon	110945211	110945334	100	-	.	Parent=ORF365.mrna1;Target=ORF365 1 124 +
Chr1	stalkie_big_nohaplotig	CDS	110943230	110943723	.	-	2	Parent=ORF365.mrna1;Target=ORF365 1463 1956 +
Chr1	stalkie_big_nohaplotig	CDS	110943736	110944335	.	-	2	Parent=ORF365.mrna1;Target=ORF365 863 1462 +
Chr1	stalkie_big_nohaplotig	CDS	110944401	110945138	.	-	2	Parent=ORF365.mrna1;Target=ORF365 125 862 +
Chr1	stalkie_big_nohaplotig	CDS	110945211	110945334	.	-	0	Parent=ORF365.mrna1;Target=ORF365 1 124 +
Chr1	gffcl	locus	110958158	110958654	.	+	.	ID=RLOC_00010154;geneIDs=comp135602_c0_seq1.path1;transcripts=comp135602_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110958158	110958654	.	+	.	ID=comp135602_c0_seq1.mrna1;geneID=comp135602_c0_seq1.path1;Name=comp135602_c0_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=433;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010154
Chr1	stalkie_big_nohaplotig	exon	110958158	110958398	100	+	.	Parent=comp135602_c0_seq1.mrna1;Target=comp135602_c0_seq1 197 437 -
Chr1	stalkie_big_nohaplotig	exon	110958459	110958654	97	+	.	Parent=comp135602_c0_seq1.mrna1;Target=comp135602_c0_seq1 1 196 -
Chr1	stalkie_big_nohaplotig	CDS	110958344	110958398	.	+	0	Parent=comp135602_c0_seq1.mrna1;Target=comp135602_c0_seq1 197 251 .
Chr1	stalkie_big_nohaplotig	CDS	110958459	110958652	.	+	2	Parent=comp135602_c0_seq1.mrna1;Target=comp135602_c0_seq1 3 196 .
Chr1	gffcl	locus	110989329	110989725	.	-	.	ID=RLOC_00010155;geneIDs=comp150328_c0_seq1.path1;transcripts=comp150328_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110989329	110989725	.	-	.	ID=comp150328_c0_seq1.mrna1;geneID=comp150328_c0_seq1.path1;Name=comp150328_c0_seq1;Dir=indeterminatecoverage=95.9;identity=99.0;matches=393;mismatches=4;indels=0;unknowns=0;Target=comp150328_c0_seq1 397 1 .;CDS_Target=comp150328_c0_seq1 293 3 .;locus=RLOC_00010155
Chr1	stalkie_big_nohaplotig	exon	110989329	110989725	98	-	.	Parent=comp150328_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	110989433	110989723	.	-	0	Parent=comp150328_c0_seq1.mrna1
Chr1	gffcl	locus	110990041	110990310	.	-	.	ID=RLOC_00010156;geneIDs=comp153054_c0_seq1.path1;transcripts=comp153054_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	110990041	110990310	.	-	.	ID=comp153054_c0_seq1.mrna1;geneID=comp153054_c0_seq1.path1;Name=comp153054_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=267;mismatches=3;indels=0;unknowns=0;Target=comp153054_c0_seq1 270 1 .;CDS_Target=comp153054_c0_seq1 269 3 .;locus=RLOC_00010156
Chr1	stalkie_big_nohaplotig	exon	110990041	110990310	98	-	.	Parent=comp153054_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	110990042	110990308	.	-	0	Parent=comp153054_c0_seq1.mrna1
Chr1	gffcl	locus	111053355	111054115	.	+	.	ID=RLOC_00010157;geneIDs=comp51514_c0_seq1.path1;transcripts=comp51514_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111053355	111054115	.	+	.	ID=comp51514_c0_seq1.mrna1;geneID=comp51514_c0_seq1.path1;Name=comp51514_c0_seq1;Dir=indeterminatecoverage=98.8;identity=98.8;matches=752;mismatches=0;indels=9;unknowns=0;Target=comp51514_c0_seq1 761 10 .;CDS_Target=comp51514_c0_seq1 139 11 .;locus=RLOC_00010157
Chr1	stalkie_big_nohaplotig	exon	111053355	111054115	98	+	.	Parent=comp51514_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111053356	111053484	.	+	0	Parent=comp51514_c0_seq1.mrna1
Chr1	gffcl	locus	111116641	111116876	.	+	.	ID=RLOC_00010158;geneIDs=comp123581_c0_seq1.path1;transcripts=comp123581_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111116641	111116876	.	+	.	ID=comp123581_c0_seq1.mrna1;geneID=comp123581_c0_seq1.path1;Name=comp123581_c0_seq1;Dir=indeterminatecoverage=99.6;identity=96.6;matches=228;mismatches=8;indels=0;unknowns=0;Target=comp123581_c0_seq1 236 1 .;CDS_Target=comp123581_c0_seq1 142 59 .;locus=RLOC_00010158
Chr1	stalkie_big_nohaplotig	exon	111116641	111116876	96	+	.	Parent=comp123581_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111116699	111116782	.	+	0	Parent=comp123581_c0_seq1.mrna1
Chr1	gffcl	locus	111271823	111272574	.	+	.	ID=RLOC_00010160;geneIDs=comp157314_c0_seq1.path1;transcripts=comp157314_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111271823	111272574	.	+	.	ID=comp157314_c0_seq1.mrna1;geneID=comp157314_c0_seq1.path1;Name=comp157314_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=744;mismatches=8;indels=0;unknowns=0;Target=comp157314_c0_seq1 752 1 .;CDS_Target=comp157314_c0_seq1 424 167 .;locus=RLOC_00010160
Chr1	stalkie_big_nohaplotig	exon	111271823	111272574	98	+	.	Parent=comp157314_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111271989	111272246	.	+	0	Parent=comp157314_c0_seq1.mrna1
Chr1	gffcl	locus	111273100	111274806	.	+	.	ID=RLOC_00010161;geneIDs=comp163338_c0_seq1.path1;transcripts=comp163338_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111273100	111274806	.	+	.	ID=comp163338_c0_seq1.mrna1;geneID=comp163338_c0_seq1.path1;Name=comp163338_c0_seq1;Dir=indeterminatecoverage=99.2;identity=89.1;matches=1672;mismatches=33;indels=171;unknowns=0;Target=comp163338_c0_seq1 1874 1 .;CDS_Target=comp163338_c0_seq1 1233 1021 .;locus=RLOC_00010161
Chr1	stalkie_big_nohaplotig	exon	111273100	111274806	89	+	.	Parent=comp163338_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111274086	111274298	.	+	0	Parent=comp163338_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111276937	111285507	.	-	.	ID=comp162705_c6_seq1.mrna1;geneID=comp162705_c6_seq1.path1;Name=comp162705_c6_seq1;Dir=antisensecoverage=66.8;identity=99.1;matches=2161;mismatches=15;indels=5;unknowns=0;locus=RLOC_00010162
Chr1	stalkie_big_nohaplotig	exon	111276937	111278025	99	-	.	Parent=comp162705_c6_seq1.mrna1;Target=comp162705_c6_seq1 25 1115 -
Chr1	stalkie_big_nohaplotig	exon	111278391	111278584	98	-	.	Parent=comp162705_c6_seq1.mrna1;Target=comp162705_c6_seq1 1116 1309 -
Chr1	stalkie_big_nohaplotig	exon	111279757	111280310	98	-	.	Parent=comp162705_c6_seq1.mrna1;Target=comp162705_c6_seq1 1310 1866 -
Chr1	stalkie_big_nohaplotig	exon	111280370	111280536	100	-	.	Parent=comp162705_c6_seq1.mrna1;Target=comp162705_c6_seq1 1867 2033 -
Chr1	stalkie_big_nohaplotig	exon	111285336	111285507	100	-	.	Parent=comp162705_c6_seq1.mrna1;Target=comp162705_c6_seq1 2034 2205 -
Chr1	stalkie_big_nohaplotig	CDS	111277981	111278025	.	-	0	Parent=comp162705_c6_seq1.mrna1;Target=comp162705_c6_seq1 1071 1115 .
Chr1	stalkie_big_nohaplotig	CDS	111278391	111278584	.	-	2	Parent=comp162705_c6_seq1.mrna1;Target=comp162705_c6_seq1 1116 1309 .
Chr1	stalkie_big_nohaplotig	CDS	111279757	111280310	.	-	1	Parent=comp162705_c6_seq1.mrna1;Target=comp162705_c6_seq1 1310 1866 .
Chr1	stalkie_big_nohaplotig	CDS	111280370	111280536	.	-	0	Parent=comp162705_c6_seq1.mrna1;Target=comp162705_c6_seq1 1867 2033 .
Chr1	stalkie_big_nohaplotig	CDS	111285336	111285506	.	-	0	Parent=comp162705_c6_seq1.mrna1;Target=comp162705_c6_seq1 2034 2204 .
Chr1	gffcl	locus	111281017	111282740	.	.	.	ID=RLOC_00010163;geneIDs=comp150376_c1_seq1.path1,comp160798_c0_seq1.path1;transcripts=comp160798_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111281017	111282149	.	+	.	ID=comp160798_c0_seq1.mrna1;geneID=comp160798_c0_seq1.path1;Name=comp160798_c0_seq1;Dir=indeterminatecoverage=98.1;identity=99.0;matches=1123;mismatches=10;indels=1;unknowns=0;Target=comp160798_c0_seq1 1134 1 .;CDS_Target=comp160798_c0_seq1 1070 801 .;locus=RLOC_00010163
Chr1	stalkie_big_nohaplotig	exon	111281017	111282149	99	+	.	Parent=comp160798_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111281817	111282085	.	+	0	Parent=comp160798_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112681601	112684075	.	+	.	ID=comp157978_c0_seq1.mrna1;geneID=comp157978_c0_seq1.path1;Name=comp157978_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=2179;mismatches=6;indels=0;unknowns=0;Target=comp157978_c0_seq1 511 1614 +;locus=RLOC_00010164
Chr1	stalkie_big_nohaplotig	exon	112681601	112681784	97	+	.	Parent=comp157978_c0_seq1.mrna1;Target=comp157978_c0_seq1 2 185 +
Chr1	stalkie_big_nohaplotig	exon	112682009	112682331	100	+	.	Parent=comp157978_c0_seq1.mrna1;Target=comp157978_c0_seq1 186 508 +
Chr1	stalkie_big_nohaplotig	exon	112682398	112684075	99	+	.	Parent=comp157978_c0_seq1.mrna1;Target=comp157978_c0_seq1 509 2186 +
Chr1	stalkie_big_nohaplotig	CDS	112682400	112683503	.	+	0	Parent=comp157978_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112732371	113818567	.	+	.	ID=comp163355_c5_seq1.mrna1;geneID=comp163355_c5_seq1.path1;Name=comp163355_c5_seq1;Dir=indeterminatecoverage=93.3;identity=99.2;matches=1102;mismatches=9;indels=0;unknowns=0;Target=comp163355_c5_seq1 511 233 .;locus=RLOC_00010164
Chr1	stalkie_big_nohaplotig	exon	112732371	112733409	99	+	.	Parent=comp163355_c5_seq1.mrna1;Target=comp163355_c5_seq1 1039 1 .
Chr1	stalkie_big_nohaplotig	exon	113751652	113751657	100	+	.	Parent=comp163355_c5_seq1.mrna1;Target=comp163355_c5_seq1 1045 1040 .
Chr1	stalkie_big_nohaplotig	exon	113759173	113759176	100	+	.	Parent=comp163355_c5_seq1.mrna1;Target=comp163355_c5_seq1 1049 1046 .
Chr1	stalkie_big_nohaplotig	exon	113763483	113763486	100	+	.	Parent=comp163355_c5_seq1.mrna1;Target=comp163355_c5_seq1 1053 1050 .
Chr1	stalkie_big_nohaplotig	exon	113777711	113777721	100	+	.	Parent=comp163355_c5_seq1.mrna1;Target=comp163355_c5_seq1 1064 1054 .
Chr1	stalkie_big_nohaplotig	exon	113777913	113777914	100	+	.	Parent=comp163355_c5_seq1.mrna1;Target=comp163355_c5_seq1 1066 1065 .
Chr1	stalkie_big_nohaplotig	exon	113781582	113781586	100	+	.	Parent=comp163355_c5_seq1.mrna1;Target=comp163355_c5_seq1 1071 1067 .
Chr1	stalkie_big_nohaplotig	exon	113786973	113786982	100	+	.	Parent=comp163355_c5_seq1.mrna1;Target=comp163355_c5_seq1 1081 1072 .
Chr1	stalkie_big_nohaplotig	exon	113798480	113798483	100	+	.	Parent=comp163355_c5_seq1.mrna1;Target=comp163355_c5_seq1 1088 1085 .
Chr1	stalkie_big_nohaplotig	exon	113804651	113804658	100	+	.	Parent=comp163355_c5_seq1.mrna1;Target=comp163355_c5_seq1 1096 1089 .
Chr1	stalkie_big_nohaplotig	exon	113813293	113813301	100	+	.	Parent=comp163355_c5_seq1.mrna1;Target=comp163355_c5_seq1 1105 1097 .
Chr1	stalkie_big_nohaplotig	exon	113818559	113818567	100	+	.	Parent=comp163355_c5_seq1.mrna1;Target=comp163355_c5_seq1 1114 1106 .
Chr1	stalkie_big_nohaplotig	CDS	112732603	112732881	.	+	0	Parent=comp163355_c5_seq1.mrna1
Chr1	gffcl	locus	111304460	111305393	.	+	.	ID=RLOC_00010165;geneIDs=FBgn0260855.1.path1;transcripts=FBgn0260855.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111304460	111305393	.	+	.	ID=FBgn0260855.1.mrna1;geneID=FBgn0260855.1.path1;Name=FBgn0260855.1;Dir=sensecoverage=100.0;identity=99.4;matches=659;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010165
Chr1	stalkie_big_nohaplotig	exon	111304460	111304564	98	+	.	Parent=FBgn0260855.1.mrna1;Target=FBgn0260855.1 1 105 +
Chr1	stalkie_big_nohaplotig	exon	111304622	111304731	99	+	.	Parent=FBgn0260855.1.mrna1;Target=FBgn0260855.1 106 215 +
Chr1	stalkie_big_nohaplotig	exon	111304811	111305066	99	+	.	Parent=FBgn0260855.1.mrna1;Target=FBgn0260855.1 216 471 +
Chr1	stalkie_big_nohaplotig	exon	111305129	111305174	100	+	.	Parent=FBgn0260855.1.mrna1;Target=FBgn0260855.1 472 517 +
Chr1	stalkie_big_nohaplotig	exon	111305248	111305393	100	+	.	Parent=FBgn0260855.1.mrna1;Target=FBgn0260855.1 518 663 +
Chr1	stalkie_big_nohaplotig	CDS	111304460	111304564	.	+	0	Parent=FBgn0260855.1.mrna1;Target=FBgn0260855.1 1 105 +
Chr1	stalkie_big_nohaplotig	CDS	111304622	111304731	.	+	0	Parent=FBgn0260855.1.mrna1;Target=FBgn0260855.1 106 215 +
Chr1	stalkie_big_nohaplotig	CDS	111304811	111305066	.	+	1	Parent=FBgn0260855.1.mrna1;Target=FBgn0260855.1 216 471 +
Chr1	stalkie_big_nohaplotig	CDS	111305129	111305174	.	+	0	Parent=FBgn0260855.1.mrna1;Target=FBgn0260855.1 472 517 +
Chr1	stalkie_big_nohaplotig	CDS	111305248	111305393	.	+	2	Parent=FBgn0260855.1.mrna1;Target=FBgn0260855.1 518 663 +
Chr1	gffcl	locus	111305639	111309361	.	-	.	ID=RLOC_00010166;geneIDs=FBgn0030406.1.path1;transcripts=FBgn0030406.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111305639	111309361	.	-	.	ID=FBgn0030406.1.mrna1;geneID=FBgn0030406.1.path1;Name=FBgn0030406.1;Dir=sensecoverage=100.0;identity=99.2;matches=1140;mismatches=9;indels=0;unknowns=0;locus=RLOC_00010166
Chr1	stalkie_big_nohaplotig	exon	111305639	111305934	98	-	.	Parent=FBgn0030406.1.mrna1;Target=FBgn0030406.1 854 1149 +
Chr1	stalkie_big_nohaplotig	exon	111306278	111306443	100	-	.	Parent=FBgn0030406.1.mrna1;Target=FBgn0030406.1 688 853 +
Chr1	stalkie_big_nohaplotig	exon	111308533	111309127	98	-	.	Parent=FBgn0030406.1.mrna1;Target=FBgn0030406.1 93 687 +
Chr1	stalkie_big_nohaplotig	exon	111309270	111309361	100	-	.	Parent=FBgn0030406.1.mrna1;Target=FBgn0030406.1 1 92 +
Chr1	stalkie_big_nohaplotig	CDS	111305639	111305934	.	-	2	Parent=FBgn0030406.1.mrna1;Target=FBgn0030406.1 854 1149 +
Chr1	stalkie_big_nohaplotig	CDS	111306278	111306443	.	-	0	Parent=FBgn0030406.1.mrna1;Target=FBgn0030406.1 688 853 +
Chr1	stalkie_big_nohaplotig	CDS	111308533	111309127	.	-	1	Parent=FBgn0030406.1.mrna1;Target=FBgn0030406.1 93 687 +
Chr1	stalkie_big_nohaplotig	CDS	111309270	111309361	.	-	0	Parent=FBgn0030406.1.mrna1;Target=FBgn0030406.1 1 92 +
Chr1	gffcl	locus	111314505	111320016	.	+	.	ID=RLOC_00010167;geneIDs=FBgn0030407.1.path1;transcripts=FBgn0030407.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111314505	111320016	.	+	.	ID=FBgn0030407.1.mrna1;geneID=FBgn0030407.1.path1;Name=FBgn0030407.1;Dir=sensecoverage=100.0;identity=99.3;matches=1665;mismatches=12;indels=0;unknowns=0;locus=RLOC_00010167
Chr1	stalkie_big_nohaplotig	exon	111314505	111314762	100	+	.	Parent=FBgn0030407.1.mrna1;Target=FBgn0030407.1 1 258 +
Chr1	stalkie_big_nohaplotig	exon	111314833	111315012	100	+	.	Parent=FBgn0030407.1.mrna1;Target=FBgn0030407.1 259 438 +
Chr1	stalkie_big_nohaplotig	exon	111318286	111318602	99	+	.	Parent=FBgn0030407.1.mrna1;Target=FBgn0030407.1 439 755 +
Chr1	stalkie_big_nohaplotig	exon	111318660	111318840	98	+	.	Parent=FBgn0030407.1.mrna1;Target=FBgn0030407.1 756 936 +
Chr1	stalkie_big_nohaplotig	exon	111319146	111319411	98	+	.	Parent=FBgn0030407.1.mrna1;Target=FBgn0030407.1 937 1202 +
Chr1	stalkie_big_nohaplotig	exon	111319476	111319553	100	+	.	Parent=FBgn0030407.1.mrna1;Target=FBgn0030407.1 1203 1280 +
Chr1	stalkie_big_nohaplotig	exon	111319620	111320016	98	+	.	Parent=FBgn0030407.1.mrna1;Target=FBgn0030407.1 1281 1677 +
Chr1	stalkie_big_nohaplotig	CDS	111314505	111314762	.	+	0	Parent=FBgn0030407.1.mrna1;Target=FBgn0030407.1 1 258 +
Chr1	stalkie_big_nohaplotig	CDS	111314833	111315012	.	+	0	Parent=FBgn0030407.1.mrna1;Target=FBgn0030407.1 259 438 +
Chr1	stalkie_big_nohaplotig	CDS	111318286	111318602	.	+	0	Parent=FBgn0030407.1.mrna1;Target=FBgn0030407.1 439 755 +
Chr1	stalkie_big_nohaplotig	CDS	111318660	111318840	.	+	1	Parent=FBgn0030407.1.mrna1;Target=FBgn0030407.1 756 936 +
Chr1	stalkie_big_nohaplotig	CDS	111319146	111319411	.	+	0	Parent=FBgn0030407.1.mrna1;Target=FBgn0030407.1 937 1202 +
Chr1	stalkie_big_nohaplotig	CDS	111319476	111319553	.	+	1	Parent=FBgn0030407.1.mrna1;Target=FBgn0030407.1 1203 1280 +
Chr1	stalkie_big_nohaplotig	CDS	111319620	111320016	.	+	1	Parent=FBgn0030407.1.mrna1;Target=FBgn0030407.1 1281 1677 +
Chr1	gffcl	locus	111321136	111337193	.	+	.	ID=RLOC_00010168;geneIDs=FBgn0030408.1.path1;transcripts=FBgn0030408.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111321136	111337193	.	+	.	ID=FBgn0030408.1.mrna1;geneID=FBgn0030408.1.path1;Name=FBgn0030408.1;Dir=sensecoverage=100.0;identity=99.0;matches=710;mismatches=7;indels=0;unknowns=0;locus=RLOC_00010168
Chr1	stalkie_big_nohaplotig	exon	111321136	111321229	94	+	.	Parent=FBgn0030408.1.mrna1;Target=FBgn0030408.1 1 94 +
Chr1	stalkie_big_nohaplotig	exon	111336509	111336911	99	+	.	Parent=FBgn0030408.1.mrna1;Target=FBgn0030408.1 95 497 +
Chr1	stalkie_big_nohaplotig	exon	111336974	111337193	99	+	.	Parent=FBgn0030408.1.mrna1;Target=FBgn0030408.1 498 717 +
Chr1	stalkie_big_nohaplotig	CDS	111321136	111321229	.	+	0	Parent=FBgn0030408.1.mrna1;Target=FBgn0030408.1 1 94 +
Chr1	stalkie_big_nohaplotig	CDS	111336509	111336911	.	+	2	Parent=FBgn0030408.1.mrna1;Target=FBgn0030408.1 95 497 +
Chr1	stalkie_big_nohaplotig	CDS	111336974	111337193	.	+	1	Parent=FBgn0030408.1.mrna1;Target=FBgn0030408.1 498 717 +
Chr1	gffcl	locus	111363443	111364388	.	+	.	ID=RLOC_00010169;geneIDs=FBgn0030410.1.path1;transcripts=FBgn0030410.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111363443	111364388	.	+	.	ID=FBgn0030410.1.mrna1;geneID=FBgn0030410.1.path1;Name=FBgn0030410.1;Dir=sensecoverage=100.0;identity=99.5;matches=872;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010169
Chr1	stalkie_big_nohaplotig	exon	111363443	111363579	100	+	.	Parent=FBgn0030410.1.mrna1;Target=FBgn0030410.1 1 137 +
Chr1	stalkie_big_nohaplotig	exon	111363650	111364388	99	+	.	Parent=FBgn0030410.1.mrna1;Target=FBgn0030410.1 138 876 +
Chr1	stalkie_big_nohaplotig	CDS	111363443	111363579	.	+	0	Parent=FBgn0030410.1.mrna1;Target=FBgn0030410.1 1 137 +
Chr1	stalkie_big_nohaplotig	CDS	111363650	111364388	.	+	1	Parent=FBgn0030410.1.mrna1;Target=FBgn0030410.1 138 876 +
Chr1	gffcl	locus	111365332	111366527	.	-	.	ID=RLOC_00010170;geneIDs=FBgn0030878.2.path1;transcripts=FBgn0030878.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111365332	111366527	.	-	.	ID=FBgn0030878.2.mrna1;geneID=FBgn0030878.2.path1;Name=FBgn0030878.2;Dir=sensecoverage=100.0;identity=99.4;matches=1068;mismatches=4;indels=2;unknowns=0;locus=RLOC_00010170
Chr1	stalkie_big_nohaplotig	exon	111365332	111365580	99	-	.	Parent=FBgn0030878.2.mrna1;Target=FBgn0030878.2 826 1074 +
Chr1	stalkie_big_nohaplotig	exon	111365645	111365983	99	-	.	Parent=FBgn0030878.2.mrna1;Target=FBgn0030878.2 487 825 +
Chr1	stalkie_big_nohaplotig	exon	111366044	111366527	99	-	.	Parent=FBgn0030878.2.mrna1;Target=FBgn0030878.2 1 486 +
Chr1	stalkie_big_nohaplotig	CDS	111365332	111365580	.	-	0	Parent=FBgn0030878.2.mrna1;Target=FBgn0030878.2 826 1074 +
Chr1	stalkie_big_nohaplotig	CDS	111365645	111365983	.	-	0	Parent=FBgn0030878.2.mrna1;Target=FBgn0030878.2 487 825 +
Chr1	stalkie_big_nohaplotig	CDS	111366044	111366427	.	-	0	Parent=FBgn0030878.2.mrna1;Target=FBgn0030878.2 103 486 +
Chr1	gffcl	locus	111367910	111369272	.	+	.	ID=RLOC_00010171;geneIDs=FBgn0030878.1.path1;transcripts=FBgn0030878.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111367910	111369272	.	+	.	ID=FBgn0030878.1.mrna1;geneID=FBgn0030878.1.path1;Name=FBgn0030878.1;Dir=sensecoverage=100.0;identity=99.9;matches=1250;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010171
Chr1	stalkie_big_nohaplotig	exon	111367910	111368449	100	+	.	Parent=FBgn0030878.1.mrna1;Target=FBgn0030878.1 1 540 +
Chr1	stalkie_big_nohaplotig	exon	111368503	111368865	100	+	.	Parent=FBgn0030878.1.mrna1;Target=FBgn0030878.1 541 903 +
Chr1	stalkie_big_nohaplotig	exon	111368925	111369272	99	+	.	Parent=FBgn0030878.1.mrna1;Target=FBgn0030878.1 904 1251 +
Chr1	stalkie_big_nohaplotig	CDS	111367910	111368449	.	+	0	Parent=FBgn0030878.1.mrna1;Target=FBgn0030878.1 1 540 +
Chr1	stalkie_big_nohaplotig	CDS	111368503	111368865	.	+	0	Parent=FBgn0030878.1.mrna1;Target=FBgn0030878.1 541 903 +
Chr1	stalkie_big_nohaplotig	CDS	111368925	111369272	.	+	0	Parent=FBgn0030878.1.mrna1;Target=FBgn0030878.1 904 1251 +
Chr1	gffcl	locus	111373153	111391065	.	-	.	ID=RLOC_00010172;geneIDs=FBgn0259168.1.path1,comp1345130_c0_seq1.path1;transcripts=FBgn0259168.1.mrna1,comp1345130_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111373153	111385809	.	-	.	ID=FBgn0259168.1.mrna1;geneID=FBgn0259168.1.path1;Name=FBgn0259168.1;Dir=sensecoverage=96.1;identity=99.7;matches=2541;mismatches=8;indels=0;unknowns=0;locus=RLOC_00010172
Chr1	stalkie_big_nohaplotig	exon	111373153	111374174	99	-	.	Parent=FBgn0259168.1.mrna1;Target=FBgn0259168.1 1631 2652 +
Chr1	stalkie_big_nohaplotig	exon	111380433	111381069	100	-	.	Parent=FBgn0259168.1.mrna1;Target=FBgn0259168.1 994 1630 +
Chr1	stalkie_big_nohaplotig	exon	111381135	111381421	100	-	.	Parent=FBgn0259168.1.mrna1;Target=FBgn0259168.1 707 993 +
Chr1	stalkie_big_nohaplotig	exon	111381480	111381647	100	-	.	Parent=FBgn0259168.1.mrna1;Target=FBgn0259168.1 539 706 +
Chr1	stalkie_big_nohaplotig	exon	111382447	111382618	100	-	.	Parent=FBgn0259168.1.mrna1;Target=FBgn0259168.1 367 538 +
Chr1	stalkie_big_nohaplotig	exon	111385470	111385604	100	-	.	Parent=FBgn0259168.1.mrna1;Target=FBgn0259168.1 232 366 +
Chr1	stalkie_big_nohaplotig	exon	111385682	111385809	100	-	.	Parent=FBgn0259168.1.mrna1;Target=FBgn0259168.1 104 231 +
Chr1	stalkie_big_nohaplotig	CDS	111373153	111374174	.	-	2	Parent=FBgn0259168.1.mrna1;Target=FBgn0259168.1 1631 2652 +
Chr1	stalkie_big_nohaplotig	CDS	111380433	111381069	.	-	0	Parent=FBgn0259168.1.mrna1;Target=FBgn0259168.1 994 1630 +
Chr1	stalkie_big_nohaplotig	CDS	111381135	111381421	.	-	2	Parent=FBgn0259168.1.mrna1;Target=FBgn0259168.1 707 993 +
Chr1	stalkie_big_nohaplotig	CDS	111381480	111381647	.	-	2	Parent=FBgn0259168.1.mrna1;Target=FBgn0259168.1 539 706 +
Chr1	stalkie_big_nohaplotig	CDS	111382447	111382618	.	-	0	Parent=FBgn0259168.1.mrna1;Target=FBgn0259168.1 367 538 +
Chr1	stalkie_big_nohaplotig	CDS	111385470	111385604	.	-	0	Parent=FBgn0259168.1.mrna1;Target=FBgn0259168.1 232 366 +
Chr1	stalkie_big_nohaplotig	CDS	111385682	111385807	.	-	0	Parent=FBgn0259168.1.mrna1;Target=FBgn0259168.1 106 231 +
Chr1	stalkie_big_nohaplotig	mRNA	111385788	111391065	.	-	.	ID=comp1345130_c0_seq1.mrna1;geneID=comp1345130_c0_seq1.path1;Name=comp1345130_c0_seq1;Dir=sensecoverage=99.8;identity=99.8;matches=456;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010172
Chr1	stalkie_big_nohaplotig	exon	111385788	111385809	100	-	.	Parent=comp1345130_c0_seq1.mrna1;Target=comp1345130_c0_seq1 437 458 +
Chr1	stalkie_big_nohaplotig	exon	111390631	111391065	99	-	.	Parent=comp1345130_c0_seq1.mrna1;Target=comp1345130_c0_seq1 2 436 +
Chr1	stalkie_big_nohaplotig	CDS	111385790	111385809	.	-	2	Parent=comp1345130_c0_seq1.mrna1;Target=comp1345130_c0_seq1 437 456 +
Chr1	stalkie_big_nohaplotig	CDS	111390631	111390820	.	-	0	Parent=comp1345130_c0_seq1.mrna1;Target=comp1345130_c0_seq1 247 436 +
Chr1	gffcl	locus	111375607	111376109	.	+	.	ID=RLOC_00010173;geneIDs=comp228507_c0_seq1.path1;transcripts=comp228507_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111375607	111376109	.	+	.	ID=comp228507_c0_seq1.mrna1;geneID=comp228507_c0_seq1.path1;Name=comp228507_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=501;mismatches=1;indels=1;unknowns=0;Target=comp228507_c0_seq1 502 1 .;CDS_Target=comp228507_c0_seq1 313 179 .;locus=RLOC_00010173
Chr1	stalkie_big_nohaplotig	exon	111375607	111376109	99	+	.	Parent=comp228507_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111375785	111375919	.	+	0	Parent=comp228507_c0_seq1.mrna1
Chr1	gffcl	locus	111376245	111377242	.	+	.	ID=RLOC_00010174;geneIDs=comp144650_c0_seq1.path1;transcripts=comp144650_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111376245	111377242	.	+	.	ID=comp144650_c0_seq1.mrna1;geneID=comp144650_c0_seq1.path1;Name=comp144650_c0_seq1;Dir=indeterminatecoverage=78.5;identity=99.7;matches=995;mismatches=3;indels=0;unknowns=0;Target=comp144650_c0_seq1 1261 264 .;CDS_Target=comp144650_c0_seq1 885 793 .;locus=RLOC_00010174
Chr1	stalkie_big_nohaplotig	exon	111376245	111377242	99	+	.	Parent=comp144650_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111376774	111376866	.	+	0	Parent=comp144650_c0_seq1.mrna1
Chr1	gffcl	locus	111414885	111415443	.	-	.	ID=RLOC_00010175;geneIDs=comp137595_c0_seq1.path1;transcripts=comp137595_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111414885	111415443	.	-	.	ID=comp137595_c0_seq1.mrna1;geneID=comp137595_c0_seq1.path1;Name=comp137595_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=556;mismatches=3;indels=0;unknowns=0;Target=comp137595_c0_seq1 559 1 .;CDS_Target=comp137595_c0_seq1 145 2 .;locus=RLOC_00010175
Chr1	stalkie_big_nohaplotig	exon	111414885	111415443	99	-	.	Parent=comp137595_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111415299	111415442	.	-	0	Parent=comp137595_c0_seq1.mrna1
Chr1	gffcl	locus	111422722	111427116	.	+	.	ID=RLOC_00010176;geneIDs=FBgn0028360.1.path1;transcripts=FBgn0028360.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111422722	111427116	.	+	.	ID=FBgn0028360.1.mrna1;geneID=FBgn0028360.1.path1;Name=FBgn0028360.1;Dir=sensecoverage=100.0;identity=99.7;matches=2030;mismatches=7;indels=0;unknowns=0;locus=RLOC_00010176
Chr1	stalkie_big_nohaplotig	exon	111422722	111423070	100	+	.	Parent=FBgn0028360.1.mrna1;Target=FBgn0028360.1 1 349 +
Chr1	stalkie_big_nohaplotig	exon	111423188	111423410	99	+	.	Parent=FBgn0028360.1.mrna1;Target=FBgn0028360.1 350 572 +
Chr1	stalkie_big_nohaplotig	exon	111425652	111427116	99	+	.	Parent=FBgn0028360.1.mrna1;Target=FBgn0028360.1 573 2037 +
Chr1	stalkie_big_nohaplotig	CDS	111422722	111423070	.	+	0	Parent=FBgn0028360.1.mrna1;Target=FBgn0028360.1 1 349 +
Chr1	stalkie_big_nohaplotig	CDS	111423188	111423410	.	+	2	Parent=FBgn0028360.1.mrna1;Target=FBgn0028360.1 350 572 +
Chr1	stalkie_big_nohaplotig	CDS	111425652	111427116	.	+	1	Parent=FBgn0028360.1.mrna1;Target=FBgn0028360.1 573 2037 +
Chr1	gffcl	locus	111428583	111429050	.	-	.	ID=RLOC_00010177;geneIDs=FBgn0029885.1.path1;transcripts=FBgn0029885.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111428583	111429050	.	-	.	ID=FBgn0029885.1.mrna1;geneID=FBgn0029885.1.path1;Name=FBgn0029885.1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=464;mismatches=4;indels=0;unknowns=0;Target=FBgn0029885.1 468 1 .;locus=RLOC_00010177
Chr1	stalkie_big_nohaplotig	exon	111428583	111429050	99	-	.	Parent=FBgn0029885.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111428583	111429050	.	-	0	Parent=FBgn0029885.1.mrna1
Chr1	gffcl	locus	111461010	111467343	.	+	.	ID=RLOC_00010178;geneIDs=FBgn0062413.1.path1;transcripts=FBgn0062413.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111461010	111467343	.	+	.	ID=FBgn0062413.1.mrna1;geneID=FBgn0062413.1.path1;Name=FBgn0062413.1;Dir=sensecoverage=100.0;identity=99.4;matches=680;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010178
Chr1	stalkie_big_nohaplotig	exon	111461010	111461058	100	+	.	Parent=FBgn0062413.1.mrna1;Target=FBgn0062413.1 1 49 +
Chr1	stalkie_big_nohaplotig	exon	111463791	111463951	100	+	.	Parent=FBgn0062413.1.mrna1;Target=FBgn0062413.1 50 210 +
Chr1	stalkie_big_nohaplotig	exon	111464021	111464265	98	+	.	Parent=FBgn0062413.1.mrna1;Target=FBgn0062413.1 211 455 +
Chr1	stalkie_big_nohaplotig	exon	111464429	111464458	100	+	.	Parent=FBgn0062413.1.mrna1;Target=FBgn0062413.1 456 485 +
Chr1	stalkie_big_nohaplotig	exon	111467145	111467343	99	+	.	Parent=FBgn0062413.1.mrna1;Target=FBgn0062413.1 486 684 +
Chr1	stalkie_big_nohaplotig	CDS	111461010	111461058	.	+	0	Parent=FBgn0062413.1.mrna1;Target=FBgn0062413.1 1 49 +
Chr1	stalkie_big_nohaplotig	CDS	111463791	111463951	.	+	2	Parent=FBgn0062413.1.mrna1;Target=FBgn0062413.1 50 210 +
Chr1	stalkie_big_nohaplotig	CDS	111464021	111464265	.	+	0	Parent=FBgn0062413.1.mrna1;Target=FBgn0062413.1 211 455 +
Chr1	stalkie_big_nohaplotig	CDS	111464429	111464458	.	+	1	Parent=FBgn0062413.1.mrna1;Target=FBgn0062413.1 456 485 +
Chr1	stalkie_big_nohaplotig	CDS	111467145	111467343	.	+	1	Parent=FBgn0062413.1.mrna1;Target=FBgn0062413.1 486 684 +
Chr1	gffcl	locus	111465162	111466489	.	-	.	ID=RLOC_00010179;geneIDs=comp156186_c0_seq1.path1;transcripts=comp156186_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111465162	111466489	.	-	.	ID=comp156186_c0_seq1.mrna1;geneID=comp156186_c0_seq1.path1;Name=comp156186_c0_seq1;Dir=indeterminatecoverage=98.3;identity=93.5;matches=1255;mismatches=23;indels=64;unknowns=0;Target=comp156186_c0_seq1 1292 1 .;CDS_Target=comp156186_c0_seq1 683 642 .;locus=RLOC_00010179
Chr1	stalkie_big_nohaplotig	exon	111465162	111466489	93	-	.	Parent=comp156186_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111465802	111465845	.	-	0	Parent=comp156186_c0_seq1.mrna1
Chr1	gffcl	locus	111469014	111473114	.	-	.	ID=RLOC_00010180;geneIDs=comp163123_c0_seq1.path1;transcripts=comp163123_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111469014	111473114	.	-	.	ID=comp163123_c0_seq1.mrna1;geneID=comp163123_c0_seq1.path1;Name=comp163123_c0_seq1;Dir=sensecoverage=99.9;identity=97.8;matches=1494;mismatches=17;indels=16;unknowns=0;locus=RLOC_00010180
Chr1	stalkie_big_nohaplotig	exon	111469014	111469207	88	-	.	Parent=comp163123_c0_seq1.mrna1;Target=comp163123_c0_seq1 1321 1527 +
Chr1	stalkie_big_nohaplotig	exon	111471318	111471325	100	-	.	Parent=comp163123_c0_seq1.mrna1;Target=comp163123_c0_seq1 1313 1320 +
Chr1	stalkie_big_nohaplotig	exon	111471501	111471509	88	-	.	Parent=comp163123_c0_seq1.mrna1;Target=comp163123_c0_seq1 1304 1312 +
Chr1	stalkie_big_nohaplotig	exon	111471675	111472124	98	-	.	Parent=comp163123_c0_seq1.mrna1;Target=comp163123_c0_seq1 853 1303 +
Chr1	stalkie_big_nohaplotig	exon	111472210	111472435	100	-	.	Parent=comp163123_c0_seq1.mrna1;Target=comp163123_c0_seq1 627 852 +
Chr1	stalkie_big_nohaplotig	exon	111472490	111473114	99	-	.	Parent=comp163123_c0_seq1.mrna1;Target=comp163123_c0_seq1 2 626 +
Chr1	stalkie_big_nohaplotig	CDS	111471813	111472124	.	-	0	Parent=comp163123_c0_seq1.mrna1;Target=comp163123_c0_seq1 853 1164 +
Chr1	stalkie_big_nohaplotig	CDS	111472210	111472371	.	-	0	Parent=comp163123_c0_seq1.mrna1;Target=comp163123_c0_seq1 691 852 +
Chr1	gffcl	locus	111475595	111476286	.	-	.	ID=RLOC_00010182;geneIDs=comp155134_c1_seq1.path1;transcripts=comp155134_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111475595	111476286	.	-	.	ID=comp155134_c1_seq1.mrna1;geneID=comp155134_c1_seq1.path1;Name=comp155134_c1_seq1;Dir=indeterminatecoverage=99.9;identity=99.1;matches=686;mismatches=6;indels=0;unknowns=0;Target=comp155134_c1_seq1 692 1 .;CDS_Target=comp155134_c1_seq1 316 65 .;locus=RLOC_00010182
Chr1	stalkie_big_nohaplotig	exon	111475595	111476286	99	-	.	Parent=comp155134_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111475971	111476222	.	-	0	Parent=comp155134_c1_seq1.mrna1
Chr1	gffcl	locus	111485469	111487183	.	.	.	ID=RLOC_00010183;geneIDs=FBgn0020513.1.path1,comp142553_c1_seq1.path1;transcripts=FBgn0020513.1.mrna1,comp142553_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111485469	111487183	.	-	.	ID=FBgn0020513.1.mrna1;geneID=FBgn0020513.1.path1;Name=FBgn0020513.1;Dir=sensecoverage=100.0;identity=99.7;matches=942;mismatches=2;indels=1;unknowns=0;locus=RLOC_00010183
Chr1	stalkie_big_nohaplotig	exon	111485469	111486142	99	-	.	Parent=FBgn0020513.1.mrna1;Target=FBgn0020513.1 272 945 +
Chr1	stalkie_big_nohaplotig	exon	111486201	111486326	100	-	.	Parent=FBgn0020513.1.mrna1;Target=FBgn0020513.1 146 271 +
Chr1	stalkie_big_nohaplotig	exon	111486716	111486828	99	-	.	Parent=FBgn0020513.1.mrna1;Target=FBgn0020513.1 32 145 +
Chr1	stalkie_big_nohaplotig	exon	111487153	111487183	100	-	.	Parent=FBgn0020513.1.mrna1;Target=FBgn0020513.1 1 31 +
Chr1	stalkie_big_nohaplotig	CDS	111486790	111486828	.	-	1	Parent=FBgn0020513.1.mrna1;Target=FBgn0020513.1 32 71 +
Chr1	stalkie_big_nohaplotig	CDS	111487153	111487181	.	-	0	Parent=FBgn0020513.1.mrna1;Target=FBgn0020513.1 3 31 +
Chr1	stalkie_big_nohaplotig	mRNA	111486305	111486735	.	+	.	ID=comp142553_c1_seq1.mrna1;geneID=comp142553_c1_seq1.path1;Name=comp142553_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=431;mismatches=0;indels=0;unknowns=0;Target=comp142553_c1_seq1 431 1 .;CDS_Target=comp142553_c1_seq1 341 285 .;locus=RLOC_00010183
Chr1	stalkie_big_nohaplotig	exon	111486305	111486735	100	+	.	Parent=comp142553_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111486589	111486645	.	+	0	Parent=comp142553_c1_seq1.mrna1
Chr1	gffcl	locus	111546321	111546370	.	-	.	ID=RLOC_00010185;geneIDs=comp615580_c0_seq1.path3;transcripts=comp615580_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	111546321	111546370	.	-	.	ID=comp615580_c0_seq1.mrna3;geneID=comp615580_c0_seq1.path3;Name=comp615580_c0_seq1;Dir=indeterminatecoverage=24.6;identity=90.0;matches=45;mismatches=5;indels=0;unknowns=0;Target=comp615580_c0_seq1 178 129 .;CDS_Target=comp615580_c0_seq1 177 130 .;locus=RLOC_00010185
Chr1	stalkie_big_nohaplotig	exon	111546321	111546370	90	-	.	Parent=comp615580_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	111546322	111546369	.	-	0	Parent=comp615580_c0_seq1.mrna3
Chr1	gffcl	locus	111549300	111552489	.	+	.	ID=RLOC_00010186;geneIDs=comp163678_c0_seq1.path1;transcripts=comp163678_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111549300	111552489	.	+	.	ID=comp163678_c0_seq1.mrna1;geneID=comp163678_c0_seq1.path1;Name=comp163678_c0_seq1;Dir=antisensecoverage=100.0;identity=96.3;matches=772;mismatches=22;indels=8;unknowns=0;locus=RLOC_00010186
Chr1	stalkie_big_nohaplotig	exon	111549300	111549561	99	+	.	Parent=comp163678_c0_seq1.mrna1;Target=comp163678_c0_seq1 541 802 -
Chr1	stalkie_big_nohaplotig	exon	111550873	111550997	95	+	.	Parent=comp163678_c0_seq1.mrna1;Target=comp163678_c0_seq1 415 540 -
Chr1	stalkie_big_nohaplotig	exon	111551056	111551205	96	+	.	Parent=comp163678_c0_seq1.mrna1;Target=comp163678_c0_seq1 265 414 -
Chr1	stalkie_big_nohaplotig	exon	111552233	111552489	93	+	.	Parent=comp163678_c0_seq1.mrna1;Target=comp163678_c0_seq1 1 264 -
Chr1	stalkie_big_nohaplotig	CDS	111549471	111549561	.	+	0	Parent=comp163678_c0_seq1.mrna1;Target=comp163678_c0_seq1 541 631 .
Chr1	stalkie_big_nohaplotig	CDS	111550873	111550912	.	+	2	Parent=comp163678_c0_seq1.mrna1;Target=comp163678_c0_seq1 500 540 .
Chr1	gffcl	locus	111553064	111554109	.	-	.	ID=RLOC_00010187;geneIDs=comp161280_c2_seq1.path1;transcripts=comp161280_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111553064	111554109	.	-	.	ID=comp161280_c2_seq1.mrna1;geneID=comp161280_c2_seq1.path1;Name=comp161280_c2_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=1033;mismatches=13;indels=9;unknowns=0;Target=comp161280_c2_seq1 1055 1 .;CDS_Target=comp161280_c2_seq1 108 1 .;locus=RLOC_00010187
Chr1	stalkie_big_nohaplotig	exon	111553064	111554109	97	-	.	Parent=comp161280_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111554008	111554109	.	-	0	Parent=comp161280_c2_seq1.mrna1
Chr1	gffcl	locus	111561226	111562110	.	-	.	ID=RLOC_00010188;geneIDs=Dv_FBgn0206941.2.path10;transcripts=Dv_FBgn0206941.2.mrna10
Chr1	stalkie_big_nohaplotig	mRNA	111561226	111562110	.	-	.	ID=Dv_FBgn0206941.2.mrna10;geneID=Dv_FBgn0206941.2.path10;Name=Dv_FBgn0206941.2;Dir=indeterminatecoverage=100.0;identity=99.4;matches=880;mismatches=5;indels=0;unknowns=0;Target=Dv_FBgn0206941.2 885 1 .;locus=RLOC_00010188
Chr1	stalkie_big_nohaplotig	exon	111561226	111562110	99	-	.	Parent=Dv_FBgn0206941.2.mrna10
Chr1	stalkie_big_nohaplotig	CDS	111561226	111562110	.	-	0	Parent=Dv_FBgn0206941.2.mrna10
Chr1	gffcl	locus	111599310	111607564	.	-	.	ID=RLOC_00010189;geneIDs=comp162545_c2_seq1.path1;transcripts=comp162545_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111599310	111607564	.	-	.	ID=comp162545_c2_seq1.mrna1;geneID=comp162545_c2_seq1.path1;Name=comp162545_c2_seq1;Dir=antisensecoverage=100.0;identity=97.0;matches=559;mismatches=17;indels=0;unknowns=0;Target=comp162545_c2_seq1 337 463 .;locus=RLOC_00010189
Chr1	stalkie_big_nohaplotig	exon	111599310	111599624	97	-	.	Parent=comp162545_c2_seq1.mrna1;Target=comp162545_c2_seq1 1 315 -
Chr1	stalkie_big_nohaplotig	exon	111607305	111607564	96	-	.	Parent=comp162545_c2_seq1.mrna1;Target=comp162545_c2_seq1 337 596 -
Chr1	stalkie_big_nohaplotig	CDS	111607305	111607431	.	-	0	Parent=comp162545_c2_seq1.mrna1
Chr1	gffcl	locus	111600819	111604984	.	+	.	ID=RLOC_00010190;geneIDs=comp162304_c0_seq1.path1;transcripts=comp162304_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111600819	111604984	.	+	.	ID=comp162304_c0_seq1.mrna1;geneID=comp162304_c0_seq1.path1;Name=comp162304_c0_seq1;Dir=indeterminatecoverage=89.5;identity=77.8;matches=1402;mismatches=156;indels=243;unknowns=0;Target=comp162304_c0_seq1 1007 951 .;locus=RLOC_00010190
Chr1	stalkie_big_nohaplotig	exon	111600819	111601124	82	+	.	Parent=comp162304_c0_seq1.mrna1;Target=comp162304_c0_seq1 535 205 .
Chr1	stalkie_big_nohaplotig	exon	111601191	111601368	65	+	.	Parent=comp162304_c0_seq1.mrna1;Target=comp162304_c0_seq1 691 561 .
Chr1	stalkie_big_nohaplotig	exon	111603719	111604782	77	+	.	Parent=comp162304_c0_seq1.mrna1;Target=comp162304_c0_seq1 1783 692 .
Chr1	stalkie_big_nohaplotig	exon	111604838	111604920	79	+	.	Parent=comp162304_c0_seq1.mrna1;Target=comp162304_c0_seq1 1890 1797 .
Chr1	stalkie_big_nohaplotig	exon	111604945	111604984	100	+	.	Parent=comp162304_c0_seq1.mrna1;Target=comp162304_c0_seq1 1942 1903 .
Chr1	stalkie_big_nohaplotig	CDS	111603939	111603995	.	+	0	Parent=comp162304_c0_seq1.mrna1
Chr1	gffcl	locus	111632542	111632914	.	+	.	ID=RLOC_00010191;geneIDs=comp59213_c0_seq1.path1;transcripts=comp59213_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111632542	111632914	.	+	.	ID=comp59213_c0_seq1.mrna1;geneID=comp59213_c0_seq1.path1;Name=comp59213_c0_seq1;Dir=indeterminatecoverage=38.6;identity=94.4;matches=356;mismatches=17;indels=4;unknowns=0;Target=comp59213_c0_seq1 377 1 .;locus=RLOC_00010191
Chr1	stalkie_big_nohaplotig	exon	111632542	111632914	94	+	.	Parent=comp59213_c0_seq1.mrna1
Chr1	gffcl	locus	111647488	111653644	.	+	.	ID=RLOC_00010192;geneIDs=FBgn0003444.1.path1;transcripts=FBgn0003444.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111647488	111653644	.	+	.	ID=FBgn0003444.1.mrna1;geneID=FBgn0003444.1.path1;Name=FBgn0003444.1;Dir=sensecoverage=100.0;identity=99.8;matches=2947;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010192
Chr1	stalkie_big_nohaplotig	exon	111647488	111647523	100	+	.	Parent=FBgn0003444.1.mrna1;Target=FBgn0003444.1 1 36 +
Chr1	stalkie_big_nohaplotig	exon	111647614	111648024	99	+	.	Parent=FBgn0003444.1.mrna1;Target=FBgn0003444.1 37 447 +
Chr1	stalkie_big_nohaplotig	exon	111648084	111648565	100	+	.	Parent=FBgn0003444.1.mrna1;Target=FBgn0003444.1 448 929 +
Chr1	stalkie_big_nohaplotig	exon	111648640	111649260	100	+	.	Parent=FBgn0003444.1.mrna1;Target=FBgn0003444.1 930 1550 +
Chr1	stalkie_big_nohaplotig	exon	111649316	111649480	100	+	.	Parent=FBgn0003444.1.mrna1;Target=FBgn0003444.1 1551 1715 +
Chr1	stalkie_big_nohaplotig	exon	111650946	111651309	100	+	.	Parent=FBgn0003444.1.mrna1;Target=FBgn0003444.1 1716 2079 +
Chr1	stalkie_big_nohaplotig	exon	111651373	111651688	99	+	.	Parent=FBgn0003444.1.mrna1;Target=FBgn0003444.1 2080 2395 +
Chr1	stalkie_big_nohaplotig	exon	111653088	111653644	99	+	.	Parent=FBgn0003444.1.mrna1;Target=FBgn0003444.1 2396 2952 +
Chr1	stalkie_big_nohaplotig	CDS	111647488	111647523	.	+	0	Parent=FBgn0003444.1.mrna1;Target=FBgn0003444.1 1 36 +
Chr1	stalkie_big_nohaplotig	CDS	111647614	111648024	.	+	0	Parent=FBgn0003444.1.mrna1;Target=FBgn0003444.1 37 447 +
Chr1	stalkie_big_nohaplotig	CDS	111648084	111648565	.	+	0	Parent=FBgn0003444.1.mrna1;Target=FBgn0003444.1 448 929 +
Chr1	stalkie_big_nohaplotig	CDS	111648640	111649260	.	+	1	Parent=FBgn0003444.1.mrna1;Target=FBgn0003444.1 930 1550 +
Chr1	stalkie_big_nohaplotig	CDS	111649316	111649480	.	+	1	Parent=FBgn0003444.1.mrna1;Target=FBgn0003444.1 1551 1715 +
Chr1	stalkie_big_nohaplotig	CDS	111650946	111651309	.	+	1	Parent=FBgn0003444.1.mrna1;Target=FBgn0003444.1 1716 2079 +
Chr1	stalkie_big_nohaplotig	CDS	111651373	111651688	.	+	0	Parent=FBgn0003444.1.mrna1;Target=FBgn0003444.1 2080 2395 +
Chr1	stalkie_big_nohaplotig	CDS	111653088	111653644	.	+	2	Parent=FBgn0003444.1.mrna1;Target=FBgn0003444.1 2396 2952 +
Chr1	gffcl	locus	111669605	111670899	.	+	.	ID=RLOC_00010194;geneIDs=comp152927_c0_seq1.path1;transcripts=comp152927_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111669605	111670899	.	+	.	ID=comp152927_c0_seq1.mrna1;geneID=comp152927_c0_seq1.path1;Name=comp152927_c0_seq1;Dir=indeterminatecoverage=96.9;identity=98.5;matches=1275;mismatches=17;indels=3;unknowns=0;Target=comp152927_c0_seq1 1334 43 .;CDS_Target=comp152927_c0_seq1 1100 990 .;locus=RLOC_00010194
Chr1	stalkie_big_nohaplotig	exon	111669605	111670899	98	+	.	Parent=comp152927_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111670552	111670662	.	+	0	Parent=comp152927_c0_seq1.mrna1
Chr1	gffcl	locus	111671986	112696451	.	+	.	ID=RLOC_00010195;geneIDs=comp155387_c0_seq1.path1;transcripts=comp155387_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111671986	112696451	.	+	.	ID=comp155387_c0_seq1.mrna1;geneID=comp155387_c0_seq1.path1;Name=comp155387_c0_seq1;Dir=indeterminatecoverage=74.5;identity=96.8;matches=762;mismatches=25;indels=0;unknowns=0;Target=comp155387_c0_seq1 343 236 .;locus=RLOC_00010195
Chr1	stalkie_big_nohaplotig	exon	111671986	111672754	96	+	.	Parent=comp155387_c0_seq1.mrna1;Target=comp155387_c0_seq1 1004 236 .
Chr1	stalkie_big_nohaplotig	exon	112669251	112669252	100	+	.	Parent=comp155387_c0_seq1.mrna1;Target=comp155387_c0_seq1 1006 1005 .
Chr1	stalkie_big_nohaplotig	exon	112677072	112677076	100	+	.	Parent=comp155387_c0_seq1.mrna1;Target=comp155387_c0_seq1 1011 1007 .
Chr1	stalkie_big_nohaplotig	exon	112696441	112696451	100	+	.	Parent=comp155387_c0_seq1.mrna1;Target=comp155387_c0_seq1 1022 1012 .
Chr1	stalkie_big_nohaplotig	CDS	111671986	111672093	.	+	0	Parent=comp155387_c0_seq1.mrna1
Chr1	gffcl	locus	111673160	111674018	.	+	.	ID=RLOC_00010196;geneIDs=comp152602_c0_seq1.path2;transcripts=comp152602_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	111673160	111674018	.	+	.	ID=comp152602_c0_seq1.mrna2;geneID=comp152602_c0_seq1.path2;Name=comp152602_c0_seq1;Dir=indeterminatecoverage=93.9;identity=97.3;matches=837;mismatches=19;indels=4;unknowns=0;Target=comp152602_c0_seq1 913 57 .;CDS_Target=comp152602_c0_seq1 620 501 .;locus=RLOC_00010196
Chr1	stalkie_big_nohaplotig	exon	111673160	111674018	97	+	.	Parent=comp152602_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	111673606	111673725	.	+	0	Parent=comp152602_c0_seq1.mrna2
Chr1	gffcl	locus	111685029	111685381	.	-	.	ID=RLOC_00010198;geneIDs=comp160548_c5_seq1.path1;transcripts=comp160548_c5_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111685029	111685381	.	-	.	ID=comp160548_c5_seq1.mrna1;geneID=comp160548_c5_seq1.path1;Name=comp160548_c5_seq1;Dir=indeterminatecoverage=18.0;identity=78.0;matches=237;mismatches=29;indels=38;unknowns=0;locus=RLOC_00010198
Chr1	stalkie_big_nohaplotig	exon	111685029	111685160	87	-	.	Parent=comp160548_c5_seq1.mrna1;Target=comp160548_c5_seq1 291 160 .
Chr1	stalkie_big_nohaplotig	exon	111685215	111685381	70	-	.	Parent=comp160548_c5_seq1.mrna1;Target=comp160548_c5_seq1 159 21 .
Chr1	gffcl	locus	111693304	111694712	.	+	.	ID=RLOC_00010201;geneIDs=comp162092_c1_seq1.path1;transcripts=comp162092_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111693304	111694712	.	+	.	ID=comp162092_c1_seq1.mrna1;geneID=comp162092_c1_seq1.path1;Name=comp162092_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1193;mismatches=9;indels=1;unknowns=0;Target=comp162092_c1_seq1 891 817 .;locus=RLOC_00010201
Chr1	stalkie_big_nohaplotig	exon	111693304	111693391	94	+	.	Parent=comp162092_c1_seq1.mrna1;Target=comp162092_c1_seq1 88 1 .
Chr1	stalkie_big_nohaplotig	exon	111693599	111694712	99	+	.	Parent=comp162092_c1_seq1.mrna1;Target=comp162092_c1_seq1 1221 107 .
Chr1	stalkie_big_nohaplotig	CDS	111694308	111694382	.	+	0	Parent=comp162092_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111726901	111728227	.	-	.	ID=comp155651_c9_seq1.mrna1;geneID=comp155651_c9_seq1.path1;Name=comp155651_c9_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=1324;mismatches=3;indels=0;unknowns=0;Target=comp155651_c9_seq1 1327 1 .;CDS_Target=comp155651_c9_seq1 281 126 .;locus=RLOC_00010206
Chr1	stalkie_big_nohaplotig	exon	111726901	111728227	99	-	.	Parent=comp155651_c9_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111727947	111728102	.	-	0	Parent=comp155651_c9_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111824951	111825760	.	+	.	ID=FBgn0031048.1.mrna1;geneID=FBgn0031048.1.path1;Name=FBgn0031048.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=809;mismatches=1;indels=0;unknowns=0;Target=FBgn0031048.1 810 1 .;locus=RLOC_00010206
Chr1	stalkie_big_nohaplotig	exon	111824951	111825760	99	+	.	Parent=FBgn0031048.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111824951	111825760	.	+	0	Parent=FBgn0031048.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111829188	111838578	.	-	.	ID=FBgn0087008.1.mrna1;geneID=FBgn0087008.1.path1;Name=FBgn0087008.1;Dir=sensecoverage=100.0;identity=99.9;matches=6498;mismatches=6;indels=0;unknowns=0;locus=RLOC_00010206
Chr1	stalkie_big_nohaplotig	exon	111829188	111829723	100	-	.	Parent=FBgn0087008.1.mrna1;Target=FBgn0087008.1 5969 6504 +
Chr1	stalkie_big_nohaplotig	exon	111829787	111829975	100	-	.	Parent=FBgn0087008.1.mrna1;Target=FBgn0087008.1 5780 5968 +
Chr1	stalkie_big_nohaplotig	exon	111831766	111831913	100	-	.	Parent=FBgn0087008.1.mrna1;Target=FBgn0087008.1 5632 5779 +
Chr1	stalkie_big_nohaplotig	exon	111831975	111832248	100	-	.	Parent=FBgn0087008.1.mrna1;Target=FBgn0087008.1 5358 5631 +
Chr1	stalkie_big_nohaplotig	exon	111832321	111832593	100	-	.	Parent=FBgn0087008.1.mrna1;Target=FBgn0087008.1 5085 5357 +
Chr1	stalkie_big_nohaplotig	exon	111832661	111833107	99	-	.	Parent=FBgn0087008.1.mrna1;Target=FBgn0087008.1 4638 5084 +
Chr1	stalkie_big_nohaplotig	exon	111833163	111833282	100	-	.	Parent=FBgn0087008.1.mrna1;Target=FBgn0087008.1 4518 4637 +
Chr1	stalkie_big_nohaplotig	exon	111833350	111833435	100	-	.	Parent=FBgn0087008.1.mrna1;Target=FBgn0087008.1 4432 4517 +
Chr1	stalkie_big_nohaplotig	exon	111834010	111834236	100	-	.	Parent=FBgn0087008.1.mrna1;Target=FBgn0087008.1 4205 4431 +
Chr1	stalkie_big_nohaplotig	exon	111834305	111835487	99	-	.	Parent=FBgn0087008.1.mrna1;Target=FBgn0087008.1 3022 4204 +
Chr1	stalkie_big_nohaplotig	exon	111835558	111838578	99	-	.	Parent=FBgn0087008.1.mrna1;Target=FBgn0087008.1 1 3021 +
Chr1	stalkie_big_nohaplotig	CDS	111829188	111829723	.	-	2	Parent=FBgn0087008.1.mrna1;Target=FBgn0087008.1 5969 6504 +
Chr1	stalkie_big_nohaplotig	CDS	111829787	111829975	.	-	2	Parent=FBgn0087008.1.mrna1;Target=FBgn0087008.1 5780 5968 +
Chr1	stalkie_big_nohaplotig	CDS	111831766	111831913	.	-	0	Parent=FBgn0087008.1.mrna1;Target=FBgn0087008.1 5632 5779 +
Chr1	stalkie_big_nohaplotig	CDS	111831975	111832248	.	-	1	Parent=FBgn0087008.1.mrna1;Target=FBgn0087008.1 5358 5631 +
Chr1	stalkie_big_nohaplotig	CDS	111832321	111832593	.	-	1	Parent=FBgn0087008.1.mrna1;Target=FBgn0087008.1 5085 5357 +
Chr1	stalkie_big_nohaplotig	CDS	111832661	111833107	.	-	1	Parent=FBgn0087008.1.mrna1;Target=FBgn0087008.1 4638 5084 +
Chr1	stalkie_big_nohaplotig	CDS	111833163	111833282	.	-	1	Parent=FBgn0087008.1.mrna1;Target=FBgn0087008.1 4518 4637 +
Chr1	stalkie_big_nohaplotig	CDS	111833350	111833435	.	-	0	Parent=FBgn0087008.1.mrna1;Target=FBgn0087008.1 4432 4517 +
Chr1	stalkie_big_nohaplotig	CDS	111834010	111834236	.	-	2	Parent=FBgn0087008.1.mrna1;Target=FBgn0087008.1 4205 4431 +
Chr1	stalkie_big_nohaplotig	CDS	111834305	111835487	.	-	0	Parent=FBgn0087008.1.mrna1;Target=FBgn0087008.1 3022 4204 +
Chr1	stalkie_big_nohaplotig	CDS	111835558	111838578	.	-	0	Parent=FBgn0087008.1.mrna1;Target=FBgn0087008.1 1 3021 +
Chr1	stalkie_big_nohaplotig	mRNA	111899197	111911668	.	-	.	ID=FBgn0030992.6.mrna1;geneID=FBgn0030992.6.path1;Name=FBgn0030992.6;Dir=sensecoverage=100.0;identity=99.4;matches=963;mismatches=6;indels=0;unknowns=0;locus=RLOC_00010206
Chr1	stalkie_big_nohaplotig	exon	111899197	111899319	100	-	.	Parent=FBgn0030992.6.mrna1;Target=FBgn0030992.6 847 969 +
Chr1	stalkie_big_nohaplotig	exon	111899380	111899545	99	-	.	Parent=FBgn0030992.6.mrna1;Target=FBgn0030992.6 681 846 +
Chr1	stalkie_big_nohaplotig	exon	111899629	111899890	100	-	.	Parent=FBgn0030992.6.mrna1;Target=FBgn0030992.6 419 680 +
Chr1	stalkie_big_nohaplotig	exon	111909651	111909905	98	-	.	Parent=FBgn0030992.6.mrna1;Target=FBgn0030992.6 164 418 +
Chr1	stalkie_big_nohaplotig	exon	111911506	111911668	99	-	.	Parent=FBgn0030992.6.mrna1;Target=FBgn0030992.6 1 163 +
Chr1	stalkie_big_nohaplotig	CDS	111899197	111899319	.	-	0	Parent=FBgn0030992.6.mrna1;Target=FBgn0030992.6 847 969 +
Chr1	stalkie_big_nohaplotig	CDS	111899380	111899545	.	-	1	Parent=FBgn0030992.6.mrna1;Target=FBgn0030992.6 681 846 +
Chr1	stalkie_big_nohaplotig	CDS	111899629	111899890	.	-	2	Parent=FBgn0030992.6.mrna1;Target=FBgn0030992.6 419 680 +
Chr1	stalkie_big_nohaplotig	CDS	111909651	111909905	.	-	2	Parent=FBgn0030992.6.mrna1;Target=FBgn0030992.6 164 418 +
Chr1	stalkie_big_nohaplotig	CDS	111911506	111911668	.	-	0	Parent=FBgn0030992.6.mrna1;Target=FBgn0030992.6 1 163 +
Chr1	gffcl	locus	111730777	111731744	.	-	.	ID=RLOC_00010207;geneIDs=comp162746_c0_seq1.path10;transcripts=comp162746_c0_seq1.mrna10
Chr1	stalkie_big_nohaplotig	mRNA	111730777	111731744	.	-	.	ID=comp162746_c0_seq1.mrna10;geneID=comp162746_c0_seq1.path10;Name=comp162746_c0_seq1;Dir=indeterminatecoverage=89.1;identity=99.4;matches=962;mismatches=6;indels=0;unknowns=0;Target=comp162746_c0_seq1 1067 100 .;CDS_Target=comp162746_c0_seq1 961 521 .;locus=RLOC_00010207
Chr1	stalkie_big_nohaplotig	exon	111730777	111731744	99	-	.	Parent=comp162746_c0_seq1.mrna10
Chr1	stalkie_big_nohaplotig	CDS	111730883	111731323	.	-	0	Parent=comp162746_c0_seq1.mrna10
Chr1	gffcl	locus	111816961	111822880	.	-	.	ID=RLOC_00010208;geneIDs=FBgn0031044.1.path1;transcripts=FBgn0031044.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111816961	111822880	.	-	.	ID=FBgn0031044.1.mrna1;geneID=FBgn0031044.1.path1;Name=FBgn0031044.1;Dir=sensecoverage=100.0;identity=98.6;matches=964;mismatches=14;indels=0;unknowns=0;locus=RLOC_00010208
Chr1	stalkie_big_nohaplotig	exon	111816961	111817220	97	-	.	Parent=FBgn0031044.1.mrna1;Target=FBgn0031044.1 719 978 +
Chr1	stalkie_big_nohaplotig	exon	111818089	111818324	100	-	.	Parent=FBgn0031044.1.mrna1;Target=FBgn0031044.1 483 718 +
Chr1	stalkie_big_nohaplotig	exon	111818384	111818483	100	-	.	Parent=FBgn0031044.1.mrna1;Target=FBgn0031044.1 383 482 +
Chr1	stalkie_big_nohaplotig	exon	111822316	111822447	100	-	.	Parent=FBgn0031044.1.mrna1;Target=FBgn0031044.1 251 382 +
Chr1	stalkie_big_nohaplotig	exon	111822631	111822880	97	-	.	Parent=FBgn0031044.1.mrna1;Target=FBgn0031044.1 1 250 +
Chr1	stalkie_big_nohaplotig	CDS	111816961	111817220	.	-	2	Parent=FBgn0031044.1.mrna1;Target=FBgn0031044.1 719 978 +
Chr1	stalkie_big_nohaplotig	CDS	111818089	111818324	.	-	1	Parent=FBgn0031044.1.mrna1;Target=FBgn0031044.1 483 718 +
Chr1	stalkie_big_nohaplotig	CDS	111818384	111818483	.	-	2	Parent=FBgn0031044.1.mrna1;Target=FBgn0031044.1 383 482 +
Chr1	stalkie_big_nohaplotig	CDS	111822316	111822447	.	-	2	Parent=FBgn0031044.1.mrna1;Target=FBgn0031044.1 251 382 +
Chr1	stalkie_big_nohaplotig	CDS	111822631	111822880	.	-	0	Parent=FBgn0031044.1.mrna1;Target=FBgn0031044.1 1 250 +
Chr1	gffcl	locus	111821124	113379726	.	+	.	ID=RLOC_00010209;geneIDs=comp160936_c1_seq1.path1;transcripts=comp160936_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111821124	113379726	.	+	.	ID=comp160936_c1_seq1.mrna1;geneID=comp160936_c1_seq1.path1;Name=comp160936_c1_seq1;Dir=indeterminatecoverage=91.7;identity=99.4;matches=1348;mismatches=8;indels=0;unknowns=0;Target=comp160936_c1_seq1 1031 834 .;locus=RLOC_00010209
Chr1	stalkie_big_nohaplotig	exon	111821124	111821133	90	+	.	Parent=comp160936_c1_seq1.mrna1;Target=comp160936_c1_seq1 132 123 .
Chr1	stalkie_big_nohaplotig	exon	113377822	113379083	99	+	.	Parent=comp160936_c1_seq1.mrna1;Target=comp160936_c1_seq1 1394 133 .
Chr1	stalkie_big_nohaplotig	exon	113379643	113379726	100	+	.	Parent=comp160936_c1_seq1.mrna1;Target=comp160936_c1_seq1 1478 1395 .
Chr1	stalkie_big_nohaplotig	CDS	113378523	113378720	.	+	0	Parent=comp160936_c1_seq1.mrna1
Chr1	gffcl	locus	111827407	111828223	.	-	.	ID=RLOC_00010210;geneIDs=comp152303_c0_seq1.path1;transcripts=comp152303_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111827407	111828223	.	-	.	ID=comp152303_c0_seq1.mrna1;geneID=comp152303_c0_seq1.path1;Name=comp152303_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=813;mismatches=4;indels=0;unknowns=0;Target=comp152303_c0_seq1 817 1 .;CDS_Target=comp152303_c0_seq1 352 272 .;locus=RLOC_00010210
Chr1	stalkie_big_nohaplotig	exon	111827407	111828223	99	-	.	Parent=comp152303_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111827872	111827952	.	-	0	Parent=comp152303_c0_seq1.mrna1
Chr1	gffcl	locus	111861567	111862034	.	-	.	ID=RLOC_00010211;geneIDs=comp136599_c0_seq1.path1;transcripts=comp136599_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111861567	111862034	.	-	.	ID=comp136599_c0_seq1.mrna1;geneID=comp136599_c0_seq1.path1;Name=comp136599_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.1;matches=466;mismatches=2;indels=2;unknowns=0;Target=comp136599_c0_seq1 471 2 .;CDS_Target=comp136599_c0_seq1 388 215 .;locus=RLOC_00010211
Chr1	stalkie_big_nohaplotig	exon	111861567	111862034	99	-	.	Parent=comp136599_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111861648	111861821	.	-	0	Parent=comp136599_c0_seq1.mrna1
Chr1	gffcl	locus	111871344	111872128	.	+	.	ID=RLOC_00010212;geneIDs=FBgn0031043.2.path1;transcripts=FBgn0031043.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111871344	111872128	.	+	.	ID=FBgn0031043.2.mrna1;geneID=FBgn0031043.2.path1;Name=FBgn0031043.2;Dir=sensecoverage=100.0;identity=99.8;matches=542;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010212
Chr1	stalkie_big_nohaplotig	exon	111871344	111871414	100	+	.	Parent=FBgn0031043.2.mrna1;Target=FBgn0031043.2 1 71 +
Chr1	stalkie_big_nohaplotig	exon	111871475	111871590	100	+	.	Parent=FBgn0031043.2.mrna1;Target=FBgn0031043.2 72 187 +
Chr1	stalkie_big_nohaplotig	exon	111871662	111871791	100	+	.	Parent=FBgn0031043.2.mrna1;Target=FBgn0031043.2 188 317 +
Chr1	stalkie_big_nohaplotig	exon	111871848	111871984	99	+	.	Parent=FBgn0031043.2.mrna1;Target=FBgn0031043.2 318 454 +
Chr1	stalkie_big_nohaplotig	exon	111872040	111872128	100	+	.	Parent=FBgn0031043.2.mrna1;Target=FBgn0031043.2 455 543 +
Chr1	stalkie_big_nohaplotig	CDS	111871344	111871414	.	+	0	Parent=FBgn0031043.2.mrna1;Target=FBgn0031043.2 1 71 +
Chr1	stalkie_big_nohaplotig	CDS	111871475	111871590	.	+	1	Parent=FBgn0031043.2.mrna1;Target=FBgn0031043.2 72 187 +
Chr1	stalkie_big_nohaplotig	CDS	111871662	111871791	.	+	2	Parent=FBgn0031043.2.mrna1;Target=FBgn0031043.2 188 317 +
Chr1	stalkie_big_nohaplotig	CDS	111871848	111871984	.	+	1	Parent=FBgn0031043.2.mrna1;Target=FBgn0031043.2 318 454 +
Chr1	stalkie_big_nohaplotig	CDS	111872040	111872128	.	+	2	Parent=FBgn0031043.2.mrna1;Target=FBgn0031043.2 455 543 +
Chr1	gffcl	locus	111877030	111877483	.	+	.	ID=RLOC_00010214;geneIDs=comp150874_c0_seq1.path1;transcripts=comp150874_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111877030	111877483	.	+	.	ID=comp150874_c0_seq1.mrna1;geneID=comp150874_c0_seq1.path1;Name=comp150874_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=449;mismatches=5;indels=1;unknowns=0;Target=comp150874_c0_seq1 455 1 .;CDS_Target=comp150874_c0_seq1 114 1 .;locus=RLOC_00010214
Chr1	stalkie_big_nohaplotig	exon	111877030	111877483	98	+	.	Parent=comp150874_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111877030	111877143	.	+	0	Parent=comp150874_c0_seq1.mrna1
Chr1	gffcl	locus	111878814	111883181	.	.	.	ID=RLOC_00010215;geneIDs=FBgn0030091.1.path1,comp156435_c0_seq1.path1;transcripts=FBgn0030091.1.mrna1,comp156435_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111878814	111882871	.	-	.	ID=FBgn0030091.1.mrna1;geneID=FBgn0030091.1.path1;Name=FBgn0030091.1;Dir=sensecoverage=100.0;identity=99.4;matches=3095;mismatches=9;indels=9;unknowns=0;locus=RLOC_00010215
Chr1	stalkie_big_nohaplotig	exon	111878814	111880014	98	-	.	Parent=FBgn0030091.1.mrna1;Target=FBgn0030091.1 1910 3107 +
Chr1	stalkie_big_nohaplotig	exon	111880963	111882871	99	-	.	Parent=FBgn0030091.1.mrna1;Target=FBgn0030091.1 1 1909 +
Chr1	stalkie_big_nohaplotig	CDS	111878816	111880014	.	-	2	Parent=FBgn0030091.1.mrna1;Target=FBgn0030091.1 1910 3105 +
Chr1	stalkie_big_nohaplotig	CDS	111880963	111882871	.	-	0	Parent=FBgn0030091.1.mrna1;Target=FBgn0030091.1 1 1909 +
Chr1	stalkie_big_nohaplotig	mRNA	111878819	111883181	.	+	.	ID=comp156435_c0_seq1.mrna1;geneID=comp156435_c0_seq1.path1;Name=comp156435_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.1;matches=4337;mismatches=15;indels=23;unknowns=0;Target=comp156435_c0_seq1 4372 9 .;CDS_Target=comp156435_c0_seq1 3515 3270 .;locus=RLOC_00010215
Chr1	stalkie_big_nohaplotig	exon	111878819	111883181	99	+	.	Parent=comp156435_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111882079	111882324	.	+	0	Parent=comp156435_c0_seq1.mrna1
Chr1	gffcl	locus	111894105	111895377	.	-	.	ID=RLOC_00010216;geneIDs=FBgn0030996.1.path1;transcripts=FBgn0030996.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111894105	111895377	.	-	.	ID=FBgn0030996.1.mrna1;geneID=FBgn0030996.1.path1;Name=FBgn0030996.1;Dir=sensecoverage=99.9;identity=99.5;matches=984;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010216
Chr1	stalkie_big_nohaplotig	exon	111894105	111894406	99	-	.	Parent=FBgn0030996.1.mrna1;Target=FBgn0030996.1 688 989 +
Chr1	stalkie_big_nohaplotig	exon	111894468	111894598	98	-	.	Parent=FBgn0030996.1.mrna1;Target=FBgn0030996.1 557 687 +
Chr1	stalkie_big_nohaplotig	exon	111894652	111894989	99	-	.	Parent=FBgn0030996.1.mrna1;Target=FBgn0030996.1 219 556 +
Chr1	stalkie_big_nohaplotig	exon	111895049	111895154	100	-	.	Parent=FBgn0030996.1.mrna1;Target=FBgn0030996.1 113 218 +
Chr1	stalkie_big_nohaplotig	exon	111895207	111895277	98	-	.	Parent=FBgn0030996.1.mrna1;Target=FBgn0030996.1 42 112 +
Chr1	stalkie_big_nohaplotig	exon	111895337	111895377	100	-	.	Parent=FBgn0030996.1.mrna1;Target=FBgn0030996.1 1 41 +
Chr1	stalkie_big_nohaplotig	CDS	111894107	111894406	.	-	0	Parent=FBgn0030996.1.mrna1;Target=FBgn0030996.1 688 987 +
Chr1	stalkie_big_nohaplotig	CDS	111894468	111894598	.	-	2	Parent=FBgn0030996.1.mrna1;Target=FBgn0030996.1 557 687 +
Chr1	stalkie_big_nohaplotig	CDS	111894652	111894989	.	-	1	Parent=FBgn0030996.1.mrna1;Target=FBgn0030996.1 219 556 +
Chr1	stalkie_big_nohaplotig	CDS	111895049	111895154	.	-	2	Parent=FBgn0030996.1.mrna1;Target=FBgn0030996.1 113 218 +
Chr1	stalkie_big_nohaplotig	CDS	111895207	111895277	.	-	1	Parent=FBgn0030996.1.mrna1;Target=FBgn0030996.1 42 112 +
Chr1	stalkie_big_nohaplotig	CDS	111895337	111895377	.	-	0	Parent=FBgn0030996.1.mrna1;Target=FBgn0030996.1 1 41 +
Chr1	gffcl	locus	111906388	111907347	.	+	.	ID=RLOC_00010217;geneIDs=FBgn0030995.1.path1;transcripts=FBgn0030995.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111906388	111907347	.	+	.	ID=FBgn0030995.1.mrna1;geneID=FBgn0030995.1.path1;Name=FBgn0030995.1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=945;mismatches=15;indels=3;unknowns=0;Target=FBgn0030995.1 963 1 .;locus=RLOC_00010217
Chr1	stalkie_big_nohaplotig	exon	111906388	111907347	98	+	.	Parent=FBgn0030995.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111906388	111907347	.	+	0	Parent=FBgn0030995.1.mrna1
Chr1	gffcl	locus	111916341	111916680	.	-	.	ID=RLOC_00010218;geneIDs=comp117906_c0_seq1.path1;transcripts=comp117906_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111916341	111916680	.	-	.	ID=comp117906_c0_seq1.mrna1;geneID=comp117906_c0_seq1.path1;Name=comp117906_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=340;mismatches=0;indels=0;unknowns=0;Target=comp117906_c0_seq1 340 1 .;CDS_Target=comp117906_c0_seq1 117 1 .;locus=RLOC_00010218
Chr1	stalkie_big_nohaplotig	exon	111916341	111916680	100	-	.	Parent=comp117906_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111916564	111916680	.	-	0	Parent=comp117906_c0_seq1.mrna1
Chr1	gffcl	locus	111917189	111918441	.	-	.	ID=RLOC_00010219;geneIDs=FBgn0030992.2.path1;transcripts=FBgn0030992.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111917189	111918441	.	-	.	ID=FBgn0030992.2.mrna1;geneID=FBgn0030992.2.path1;Name=FBgn0030992.2;Dir=sensecoverage=100.0;identity=99.2;matches=732;mismatches=6;indels=0;unknowns=0;locus=RLOC_00010219
Chr1	stalkie_big_nohaplotig	exon	111917189	111917258	100	-	.	Parent=FBgn0030992.2.mrna1;Target=FBgn0030992.2 669 738 +
Chr1	stalkie_big_nohaplotig	exon	111917316	111917832	99	-	.	Parent=FBgn0030992.2.mrna1;Target=FBgn0030992.2 152 668 +
Chr1	stalkie_big_nohaplotig	exon	111918291	111918441	98	-	.	Parent=FBgn0030992.2.mrna1;Target=FBgn0030992.2 1 151 +
Chr1	stalkie_big_nohaplotig	CDS	111917189	111917258	.	-	1	Parent=FBgn0030992.2.mrna1;Target=FBgn0030992.2 669 738 +
Chr1	stalkie_big_nohaplotig	CDS	111917316	111917832	.	-	2	Parent=FBgn0030992.2.mrna1;Target=FBgn0030992.2 152 668 +
Chr1	stalkie_big_nohaplotig	CDS	111918291	111918441	.	-	0	Parent=FBgn0030992.2.mrna1;Target=FBgn0030992.2 1 151 +
Chr1	gffcl	locus	111920849	111932825	.	-	.	ID=RLOC_00010220;geneIDs=FBgn0030992.4.path1;transcripts=FBgn0030992.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111920849	111932825	.	-	.	ID=FBgn0030992.4.mrna1;geneID=FBgn0030992.4.path1;Name=FBgn0030992.4;Dir=sensecoverage=100.0;identity=99.6;matches=968;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010220
Chr1	stalkie_big_nohaplotig	exon	111920849	111920986	99	-	.	Parent=FBgn0030992.4.mrna1;Target=FBgn0030992.4 835 972 +
Chr1	stalkie_big_nohaplotig	exon	111921053	111921218	99	-	.	Parent=FBgn0030992.4.mrna1;Target=FBgn0030992.4 669 834 +
Chr1	stalkie_big_nohaplotig	exon	111921920	111922436	99	-	.	Parent=FBgn0030992.4.mrna1;Target=FBgn0030992.4 152 668 +
Chr1	stalkie_big_nohaplotig	exon	111932675	111932825	100	-	.	Parent=FBgn0030992.4.mrna1;Target=FBgn0030992.4 1 151 +
Chr1	stalkie_big_nohaplotig	CDS	111920849	111920986	.	-	0	Parent=FBgn0030992.4.mrna1;Target=FBgn0030992.4 835 972 +
Chr1	stalkie_big_nohaplotig	CDS	111921053	111921218	.	-	1	Parent=FBgn0030992.4.mrna1;Target=FBgn0030992.4 669 834 +
Chr1	stalkie_big_nohaplotig	CDS	111921920	111922436	.	-	2	Parent=FBgn0030992.4.mrna1;Target=FBgn0030992.4 152 668 +
Chr1	stalkie_big_nohaplotig	CDS	111932675	111932825	.	-	0	Parent=FBgn0030992.4.mrna1;Target=FBgn0030992.4 1 151 +
Chr1	gffcl	locus	111937776	111938780	.	-	.	ID=RLOC_00010221;geneIDs=ORF1751.path1;transcripts=ORF1751.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111937776	111938780	.	-	.	ID=ORF1751.mrna1;geneID=ORF1751.path1;Name=ORF1751;Dir=indeterminatecoverage=100.0;identity=99.0;matches=995;mismatches=10;indels=0;unknowns=0;Target=ORF1751 1005 1 .;locus=RLOC_00010221
Chr1	stalkie_big_nohaplotig	exon	111937776	111938780	99	-	.	Parent=ORF1751.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111937776	111938780	.	-	0	Parent=ORF1751.mrna1
Chr1	gffcl	locus	111941468	111943080	.	+	.	ID=RLOC_00010222;geneIDs=FBgn0046301.1.path1;transcripts=FBgn0046301.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111941468	111943080	.	+	.	ID=FBgn0046301.1.mrna1;geneID=FBgn0046301.1.path1;Name=FBgn0046301.1;Dir=sensecoverage=100.0;identity=99.9;matches=1328;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010222
Chr1	stalkie_big_nohaplotig	exon	111941468	111941492	100	+	.	Parent=FBgn0046301.1.mrna1;Target=FBgn0046301.1 1 25 +
Chr1	stalkie_big_nohaplotig	exon	111941555	111942747	99	+	.	Parent=FBgn0046301.1.mrna1;Target=FBgn0046301.1 26 1218 +
Chr1	stalkie_big_nohaplotig	exon	111942970	111943080	100	+	.	Parent=FBgn0046301.1.mrna1;Target=FBgn0046301.1 1219 1329 +
Chr1	stalkie_big_nohaplotig	CDS	111941468	111941492	.	+	0	Parent=FBgn0046301.1.mrna1;Target=FBgn0046301.1 1 25 +
Chr1	stalkie_big_nohaplotig	CDS	111941555	111942747	.	+	2	Parent=FBgn0046301.1.mrna1;Target=FBgn0046301.1 26 1218 +
Chr1	stalkie_big_nohaplotig	CDS	111942970	111943080	.	+	0	Parent=FBgn0046301.1.mrna1;Target=FBgn0046301.1 1219 1329 +
Chr1	gffcl	locus	111943576	111944642	.	-	.	ID=RLOC_00010223;geneIDs=FBgn0030509.1.path1;transcripts=FBgn0030509.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111943576	111944642	.	-	.	ID=FBgn0030509.1.mrna1;geneID=FBgn0030509.1.path1;Name=FBgn0030509.1;Dir=sensecoverage=100.0;identity=100.0;matches=867;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010223
Chr1	stalkie_big_nohaplotig	exon	111943576	111943681	100	-	.	Parent=FBgn0030509.1.mrna1;Target=FBgn0030509.1 762 867 +
Chr1	stalkie_big_nohaplotig	exon	111943738	111944198	100	-	.	Parent=FBgn0030509.1.mrna1;Target=FBgn0030509.1 301 761 +
Chr1	stalkie_big_nohaplotig	exon	111944276	111944451	100	-	.	Parent=FBgn0030509.1.mrna1;Target=FBgn0030509.1 125 300 +
Chr1	stalkie_big_nohaplotig	exon	111944519	111944642	100	-	.	Parent=FBgn0030509.1.mrna1;Target=FBgn0030509.1 1 124 +
Chr1	stalkie_big_nohaplotig	CDS	111943576	111943681	.	-	1	Parent=FBgn0030509.1.mrna1;Target=FBgn0030509.1 762 867 +
Chr1	stalkie_big_nohaplotig	CDS	111943738	111944198	.	-	0	Parent=FBgn0030509.1.mrna1;Target=FBgn0030509.1 301 761 +
Chr1	stalkie_big_nohaplotig	CDS	111944276	111944451	.	-	2	Parent=FBgn0030509.1.mrna1;Target=FBgn0030509.1 125 300 +
Chr1	stalkie_big_nohaplotig	CDS	111944519	111944642	.	-	0	Parent=FBgn0030509.1.mrna1;Target=FBgn0030509.1 1 124 +
Chr1	gffcl	locus	111946579	111947480	.	-	.	ID=RLOC_00010224;geneIDs=comp153650_c0_seq1.path1;transcripts=comp153650_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111946579	111947480	.	-	.	ID=comp153650_c0_seq1.mrna1;geneID=comp153650_c0_seq1.path1;Name=comp153650_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.0;matches=881;mismatches=15;indels=12;unknowns=0;Target=comp153650_c0_seq1 902 1 .;CDS_Target=comp153650_c0_seq1 449 351 .;locus=RLOC_00010224
Chr1	stalkie_big_nohaplotig	exon	111946579	111947480	97	-	.	Parent=comp153650_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111947032	111947130	.	-	0	Parent=comp153650_c0_seq1.mrna1
Chr1	gffcl	locus	111948291	111960282	.	-	.	ID=RLOC_00010225;geneIDs=FBgn0030485.1.path1,comp153801_c0_seq1.path1,comp160035_c2_seq1.path1;transcripts=comp160035_c2_seq1.mrna1,FBgn0030485.1.mrna1,comp153801_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111948291	111957175	.	-	.	ID=comp160035_c2_seq1.mrna1;geneID=comp160035_c2_seq1.path1;Name=comp160035_c2_seq1;Dir=sensecoverage=100.0;identity=97.4;matches=3046;mismatches=52;indels=28;unknowns=0;locus=RLOC_00010225
Chr1	stalkie_big_nohaplotig	exon	111948291	111949644	96	-	.	Parent=comp160035_c2_seq1.mrna1;Target=comp160035_c2_seq1 1769 3099 +
Chr1	stalkie_big_nohaplotig	exon	111949707	111950337	99	-	.	Parent=comp160035_c2_seq1.mrna1;Target=comp160035_c2_seq1 1138 1768 +
Chr1	stalkie_big_nohaplotig	exon	111950875	111951991	96	-	.	Parent=comp160035_c2_seq1.mrna1;Target=comp160035_c2_seq1 24 1137 +
Chr1	stalkie_big_nohaplotig	exon	111957153	111957175	100	-	.	Parent=comp160035_c2_seq1.mrna1;Target=comp160035_c2_seq1 1 23 +
Chr1	stalkie_big_nohaplotig	CDS	111949494	111949644	.	-	1	Parent=comp160035_c2_seq1.mrna1;Target=comp160035_c2_seq1 1769 1919 +
Chr1	stalkie_big_nohaplotig	CDS	111949707	111950337	.	-	2	Parent=comp160035_c2_seq1.mrna1;Target=comp160035_c2_seq1 1138 1768 +
Chr1	stalkie_big_nohaplotig	CDS	111950875	111950947	.	-	0	Parent=comp160035_c2_seq1.mrna1;Target=comp160035_c2_seq1 1068 1137 +
Chr1	stalkie_big_nohaplotig	mRNA	111949497	111960282	.	-	.	ID=FBgn0030485.1.mrna1;geneID=FBgn0030485.1.path1;Name=FBgn0030485.1;Dir=sensecoverage=100.0;identity=99.7;matches=1166;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010225
Chr1	stalkie_big_nohaplotig	exon	111949497	111949644	100	-	.	Parent=FBgn0030485.1.mrna1;Target=FBgn0030485.1 1023 1170 +
Chr1	stalkie_big_nohaplotig	exon	111949707	111950337	99	-	.	Parent=FBgn0030485.1.mrna1;Target=FBgn0030485.1 392 1022 +
Chr1	stalkie_big_nohaplotig	exon	111957153	111957226	98	-	.	Parent=FBgn0030485.1.mrna1;Target=FBgn0030485.1 318 391 +
Chr1	stalkie_big_nohaplotig	exon	111959966	111960282	99	-	.	Parent=FBgn0030485.1.mrna1;Target=FBgn0030485.1 1 317 +
Chr1	stalkie_big_nohaplotig	CDS	111949497	111949644	.	-	1	Parent=FBgn0030485.1.mrna1;Target=FBgn0030485.1 1023 1170 +
Chr1	stalkie_big_nohaplotig	CDS	111949707	111950337	.	-	2	Parent=FBgn0030485.1.mrna1;Target=FBgn0030485.1 392 1022 +
Chr1	stalkie_big_nohaplotig	CDS	111957153	111957226	.	-	1	Parent=FBgn0030485.1.mrna1;Target=FBgn0030485.1 318 391 +
Chr1	stalkie_big_nohaplotig	CDS	111959966	111960282	.	-	0	Parent=FBgn0030485.1.mrna1;Target=FBgn0030485.1 1 317 +
Chr1	stalkie_big_nohaplotig	mRNA	111956312	111957174	.	-	.	ID=comp153801_c0_seq1.mrna1;geneID=comp153801_c0_seq1.path1;Name=comp153801_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=858;mismatches=4;indels=17;unknowns=0;Target=comp153801_c0_seq1 878 1 .;CDS_Target=comp153801_c0_seq1 446 315 .;locus=RLOC_00010225
Chr1	stalkie_big_nohaplotig	exon	111956312	111957174	97	-	.	Parent=comp153801_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111956744	111956874	.	-	0	Parent=comp153801_c0_seq1.mrna1
Chr1	gffcl	locus	111952378	111952924	.	+	.	ID=RLOC_00010226;geneIDs=FBgn0035334.1.path1;transcripts=FBgn0035334.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111952378	111952924	.	+	.	ID=FBgn0035334.1.mrna1;geneID=FBgn0035334.1.path1;Name=FBgn0035334.1;Dir=sensecoverage=98.8;identity=99.5;matches=425;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010226
Chr1	stalkie_big_nohaplotig	exon	111952378	111952560	98	+	.	Parent=FBgn0035334.1.mrna1;Target=FBgn0035334.1 6 188 +
Chr1	stalkie_big_nohaplotig	exon	111952616	111952772	100	+	.	Parent=FBgn0035334.1.mrna1;Target=FBgn0035334.1 189 345 +
Chr1	stalkie_big_nohaplotig	exon	111952838	111952924	100	+	.	Parent=FBgn0035334.1.mrna1;Target=FBgn0035334.1 346 432 +
Chr1	stalkie_big_nohaplotig	CDS	111952379	111952560	.	+	0	Parent=FBgn0035334.1.mrna1;Target=FBgn0035334.1 7 188 +
Chr1	stalkie_big_nohaplotig	CDS	111952616	111952772	.	+	1	Parent=FBgn0035334.1.mrna1;Target=FBgn0035334.1 189 345 +
Chr1	stalkie_big_nohaplotig	CDS	111952838	111952924	.	+	0	Parent=FBgn0035334.1.mrna1;Target=FBgn0035334.1 346 432 +
Chr1	gffcl	locus	111963344	111964201	.	-	.	ID=RLOC_00010227;geneIDs=comp152488_c0_seq1.path1;transcripts=comp152488_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111963344	111964201	.	-	.	ID=comp152488_c0_seq1.mrna1;geneID=comp152488_c0_seq1.path1;Name=comp152488_c0_seq1;Dir=indeterminatecoverage=94.2;identity=99.9;matches=857;mismatches=1;indels=0;unknowns=0;Target=comp152488_c0_seq1 911 54 .;CDS_Target=comp152488_c0_seq1 847 410 .;locus=RLOC_00010227
Chr1	stalkie_big_nohaplotig	exon	111963344	111964201	99	-	.	Parent=comp152488_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	111963408	111963845	.	-	0	Parent=comp152488_c0_seq1.mrna1
Chr1	gffcl	locus	111982437	111991258	.	+	.	ID=RLOC_00010228;geneIDs=FBgn0030809.1.path1;transcripts=FBgn0030809.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111982437	111991258	.	+	.	ID=FBgn0030809.1.mrna1;geneID=FBgn0030809.1.path1;Name=FBgn0030809.1;Dir=sensecoverage=95.9;identity=99.9;matches=5146;mismatches=7;indels=0;unknowns=0;locus=RLOC_00010228
Chr1	stalkie_big_nohaplotig	exon	111982437	111982451	100	+	.	Parent=FBgn0030809.1.mrna1;Target=FBgn0030809.1 221 235 +
Chr1	stalkie_big_nohaplotig	exon	111985605	111985939	100	+	.	Parent=FBgn0030809.1.mrna1;Target=FBgn0030809.1 236 570 +
Chr1	stalkie_big_nohaplotig	exon	111986016	111987018	99	+	.	Parent=FBgn0030809.1.mrna1;Target=FBgn0030809.1 571 1573 +
Chr1	stalkie_big_nohaplotig	exon	111987085	111987548	99	+	.	Parent=FBgn0030809.1.mrna1;Target=FBgn0030809.1 1574 2037 +
Chr1	stalkie_big_nohaplotig	exon	111987625	111988289	100	+	.	Parent=FBgn0030809.1.mrna1;Target=FBgn0030809.1 2038 2702 +
Chr1	stalkie_big_nohaplotig	exon	111988344	111988455	100	+	.	Parent=FBgn0030809.1.mrna1;Target=FBgn0030809.1 2703 2814 +
Chr1	stalkie_big_nohaplotig	exon	111988525	111988653	100	+	.	Parent=FBgn0030809.1.mrna1;Target=FBgn0030809.1 2815 2943 +
Chr1	stalkie_big_nohaplotig	exon	111988705	111989187	100	+	.	Parent=FBgn0030809.1.mrna1;Target=FBgn0030809.1 2944 3426 +
Chr1	stalkie_big_nohaplotig	exon	111989251	111990106	99	+	.	Parent=FBgn0030809.1.mrna1;Target=FBgn0030809.1 3427 4282 +
Chr1	stalkie_big_nohaplotig	exon	111990168	111991258	99	+	.	Parent=FBgn0030809.1.mrna1;Target=FBgn0030809.1 4283 5373 +
Chr1	stalkie_big_nohaplotig	CDS	111982439	111982451	.	+	0	Parent=FBgn0030809.1.mrna1;Target=FBgn0030809.1 223 235 +
Chr1	stalkie_big_nohaplotig	CDS	111985605	111985939	.	+	2	Parent=FBgn0030809.1.mrna1;Target=FBgn0030809.1 236 570 +
Chr1	stalkie_big_nohaplotig	CDS	111986016	111987018	.	+	0	Parent=FBgn0030809.1.mrna1;Target=FBgn0030809.1 571 1573 +
Chr1	stalkie_big_nohaplotig	CDS	111987085	111987548	.	+	2	Parent=FBgn0030809.1.mrna1;Target=FBgn0030809.1 1574 2037 +
Chr1	stalkie_big_nohaplotig	CDS	111987625	111988289	.	+	0	Parent=FBgn0030809.1.mrna1;Target=FBgn0030809.1 2038 2702 +
Chr1	stalkie_big_nohaplotig	CDS	111988344	111988455	.	+	1	Parent=FBgn0030809.1.mrna1;Target=FBgn0030809.1 2703 2814 +
Chr1	stalkie_big_nohaplotig	CDS	111988525	111988653	.	+	0	Parent=FBgn0030809.1.mrna1;Target=FBgn0030809.1 2815 2943 +
Chr1	stalkie_big_nohaplotig	CDS	111988705	111989187	.	+	0	Parent=FBgn0030809.1.mrna1;Target=FBgn0030809.1 2944 3426 +
Chr1	stalkie_big_nohaplotig	CDS	111989251	111990106	.	+	0	Parent=FBgn0030809.1.mrna1;Target=FBgn0030809.1 3427 4282 +
Chr1	stalkie_big_nohaplotig	CDS	111990168	111991258	.	+	2	Parent=FBgn0030809.1.mrna1;Target=FBgn0030809.1 4283 5373 +
Chr1	gffcl	locus	111993659	111995233	.	+	.	ID=RLOC_00010229;geneIDs=ORF2395.path1;transcripts=ORF2395.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111993659	111995233	.	+	.	ID=ORF2395.mrna1;geneID=ORF2395.path1;Name=ORF2395;Dir=sensecoverage=100.0;identity=99.4;matches=862;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010229
Chr1	stalkie_big_nohaplotig	exon	111993659	111993672	100	+	.	Parent=ORF2395.mrna1;Target=ORF2395 1 14 +
Chr1	stalkie_big_nohaplotig	exon	111993729	111993772	97	+	.	Parent=ORF2395.mrna1;Target=ORF2395 15 58 +
Chr1	stalkie_big_nohaplotig	exon	111993856	111994229	99	+	.	Parent=ORF2395.mrna1;Target=ORF2395 59 432 +
Chr1	stalkie_big_nohaplotig	exon	111994319	111994372	100	+	.	Parent=ORF2395.mrna1;Target=ORF2395 433 486 +
Chr1	stalkie_big_nohaplotig	exon	111994471	111994545	100	+	.	Parent=ORF2395.mrna1;Target=ORF2395 487 561 +
Chr1	stalkie_big_nohaplotig	exon	111994928	111995233	99	+	.	Parent=ORF2395.mrna1;Target=ORF2395 562 867 +
Chr1	stalkie_big_nohaplotig	CDS	111993659	111993672	.	+	0	Parent=ORF2395.mrna1;Target=ORF2395 1 14 +
Chr1	stalkie_big_nohaplotig	CDS	111993729	111993772	.	+	1	Parent=ORF2395.mrna1;Target=ORF2395 15 58 +
Chr1	stalkie_big_nohaplotig	CDS	111993856	111994229	.	+	2	Parent=ORF2395.mrna1;Target=ORF2395 59 432 +
Chr1	stalkie_big_nohaplotig	CDS	111994319	111994372	.	+	0	Parent=ORF2395.mrna1;Target=ORF2395 433 486 +
Chr1	stalkie_big_nohaplotig	CDS	111994471	111994545	.	+	0	Parent=ORF2395.mrna1;Target=ORF2395 487 561 +
Chr1	stalkie_big_nohaplotig	CDS	111994928	111995233	.	+	0	Parent=ORF2395.mrna1;Target=ORF2395 562 867 +
Chr1	gffcl	locus	111998261	111998871	.	+	.	ID=RLOC_00010230;geneIDs=FBgn0035334.2.path1;transcripts=FBgn0035334.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111998261	111998871	.	+	.	ID=FBgn0035334.2.mrna1;geneID=FBgn0035334.2.path1;Name=FBgn0035334.2;Dir=sensecoverage=100.0;identity=99.4;matches=474;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010230
Chr1	stalkie_big_nohaplotig	exon	111998261	111998493	99	+	.	Parent=FBgn0035334.2.mrna1;Target=FBgn0035334.2 1 233 +
Chr1	stalkie_big_nohaplotig	exon	111998567	111998723	99	+	.	Parent=FBgn0035334.2.mrna1;Target=FBgn0035334.2 234 390 +
Chr1	stalkie_big_nohaplotig	exon	111998785	111998871	100	+	.	Parent=FBgn0035334.2.mrna1;Target=FBgn0035334.2 391 477 +
Chr1	stalkie_big_nohaplotig	CDS	111998261	111998493	.	+	0	Parent=FBgn0035334.2.mrna1;Target=FBgn0035334.2 1 233 +
Chr1	stalkie_big_nohaplotig	CDS	111998567	111998723	.	+	1	Parent=FBgn0035334.2.mrna1;Target=FBgn0035334.2 234 390 +
Chr1	stalkie_big_nohaplotig	CDS	111998785	111998871	.	+	0	Parent=FBgn0035334.2.mrna1;Target=FBgn0035334.2 391 477 +
Chr1	gffcl	locus	111999059	111999575	.	-	.	ID=RLOC_00010231;geneIDs=FBgn0035335.1.path1;transcripts=FBgn0035335.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111999059	111999575	.	-	.	ID=FBgn0035335.1.mrna1;geneID=FBgn0035335.1.path1;Name=FBgn0035335.1;Dir=sensecoverage=100.0;identity=99.8;matches=452;mismatches=0;indels=1;unknowns=0;Target=FBgn0035335.1 3 98 +;locus=RLOC_00010231
Chr1	stalkie_big_nohaplotig	exon	111999059	111999214	100	-	.	Parent=FBgn0035335.1.mrna1;Target=FBgn0035335.1 298 453 +
Chr1	stalkie_big_nohaplotig	exon	111999280	111999575	99	-	.	Parent=FBgn0035335.1.mrna1;Target=FBgn0035335.1 1 297 +
Chr1	stalkie_big_nohaplotig	CDS	111999479	111999573	.	-	0	Parent=FBgn0035335.1.mrna1
Chr1	gffcl	locus	111999789	112002406	.	+	.	ID=RLOC_00010232;geneIDs=FBgn0035336.1.path1;transcripts=FBgn0035336.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	111999789	112002406	.	+	.	ID=FBgn0035336.1.mrna1;geneID=FBgn0035336.1.path1;Name=FBgn0035336.1;Dir=sensecoverage=100.0;identity=99.1;matches=2542;mismatches=23;indels=0;unknowns=0;locus=RLOC_00010232
Chr1	stalkie_big_nohaplotig	exon	111999789	112000692	99	+	.	Parent=FBgn0035336.1.mrna1;Target=FBgn0035336.1 1 904 +
Chr1	stalkie_big_nohaplotig	exon	112000746	112002406	99	+	.	Parent=FBgn0035336.1.mrna1;Target=FBgn0035336.1 905 2565 +
Chr1	stalkie_big_nohaplotig	CDS	111999789	112000692	.	+	0	Parent=FBgn0035336.1.mrna1;Target=FBgn0035336.1 1 904 +
Chr1	stalkie_big_nohaplotig	CDS	112000746	112002406	.	+	2	Parent=FBgn0035336.1.mrna1;Target=FBgn0035336.1 905 2565 +
Chr1	gffcl	locus	112002517	112003389	.	-	.	ID=RLOC_00010233;geneIDs=FBgn0035337.1.path1;transcripts=FBgn0035337.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112002517	112003389	.	-	.	ID=FBgn0035337.1.mrna1;geneID=FBgn0035337.1.path1;Name=FBgn0035337.1;Dir=sensecoverage=100.0;identity=98.7;matches=749;mismatches=10;indels=0;unknowns=0;locus=RLOC_00010233
Chr1	stalkie_big_nohaplotig	exon	112002517	112003076	98	-	.	Parent=FBgn0035337.1.mrna1;Target=FBgn0035337.1 200 759 +
Chr1	stalkie_big_nohaplotig	exon	112003134	112003226	98	-	.	Parent=FBgn0035337.1.mrna1;Target=FBgn0035337.1 107 199 +
Chr1	stalkie_big_nohaplotig	exon	112003284	112003389	100	-	.	Parent=FBgn0035337.1.mrna1;Target=FBgn0035337.1 1 106 +
Chr1	stalkie_big_nohaplotig	CDS	112002517	112003076	.	-	2	Parent=FBgn0035337.1.mrna1;Target=FBgn0035337.1 200 759 +
Chr1	stalkie_big_nohaplotig	CDS	112003134	112003226	.	-	2	Parent=FBgn0035337.1.mrna1;Target=FBgn0035337.1 107 199 +
Chr1	stalkie_big_nohaplotig	CDS	112003284	112003389	.	-	0	Parent=FBgn0035337.1.mrna1;Target=FBgn0035337.1 1 106 +
Chr1	gffcl	locus	112005505	112006059	.	+	.	ID=RLOC_00010234;geneIDs=FBgn0003141.1.path1;transcripts=FBgn0003141.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112005505	112006059	.	+	.	ID=FBgn0003141.1.mrna1;geneID=FBgn0003141.1.path1;Name=FBgn0003141.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=555;mismatches=0;indels=0;unknowns=0;Target=FBgn0003141.1 555 1 .;locus=RLOC_00010234
Chr1	stalkie_big_nohaplotig	exon	112005505	112006059	100	+	.	Parent=FBgn0003141.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112005505	112006059	.	+	0	Parent=FBgn0003141.1.mrna1
Chr1	gffcl	locus	112008343	112009310	.	-	.	ID=RLOC_00010235;geneIDs=FBgn0030797.1.path1;transcripts=FBgn0030797.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112008343	112009310	.	-	.	ID=FBgn0030797.1.mrna1;geneID=FBgn0030797.1.path1;Name=FBgn0030797.1;Dir=sensecoverage=100.0;identity=100.0;matches=597;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010235
Chr1	stalkie_big_nohaplotig	exon	112008343	112008525	100	-	.	Parent=FBgn0030797.1.mrna1;Target=FBgn0030797.1 415 597 +
Chr1	stalkie_big_nohaplotig	exon	112008585	112008933	100	-	.	Parent=FBgn0030797.1.mrna1;Target=FBgn0030797.1 66 414 +
Chr1	stalkie_big_nohaplotig	exon	112009246	112009310	100	-	.	Parent=FBgn0030797.1.mrna1;Target=FBgn0030797.1 1 65 +
Chr1	stalkie_big_nohaplotig	CDS	112008343	112008525	.	-	0	Parent=FBgn0030797.1.mrna1;Target=FBgn0030797.1 415 597 +
Chr1	stalkie_big_nohaplotig	CDS	112008585	112008933	.	-	1	Parent=FBgn0030797.1.mrna1;Target=FBgn0030797.1 66 414 +
Chr1	stalkie_big_nohaplotig	CDS	112009246	112009310	.	-	0	Parent=FBgn0030797.1.mrna1;Target=FBgn0030797.1 1 65 +
Chr1	gffcl	locus	112031816	112033182	.	-	.	ID=RLOC_00010236;geneIDs=comp158977_c2_seq1.path1;transcripts=comp158977_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112031816	112033182	.	-	.	ID=comp158977_c2_seq1.mrna1;geneID=comp158977_c2_seq1.path1;Name=comp158977_c2_seq1;Dir=indeterminatecoverage=98.1;identity=99.3;matches=1360;mismatches=5;indels=4;unknowns=0;Target=comp158977_c2_seq1 1367 1 .;CDS_Target=comp158977_c2_seq1 816 694 .;locus=RLOC_00010236
Chr1	stalkie_big_nohaplotig	exon	112031816	112033182	99	-	.	Parent=comp158977_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112032369	112032491	.	-	0	Parent=comp158977_c2_seq1.mrna1
Chr1	gffcl	locus	112048566	112049024	.	-	.	ID=RLOC_00010237;geneIDs=comp113749_c0_seq1.path1;transcripts=comp113749_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112048566	112049024	.	-	.	ID=comp113749_c0_seq1.mrna1;geneID=comp113749_c0_seq1.path1;Name=comp113749_c0_seq1;Dir=indeterminatecoverage=97.5;identity=100.0;matches=459;mismatches=0;indels=0;unknowns=0;Target=comp113749_c0_seq1 471 13 .;CDS_Target=comp113749_c0_seq1 260 111 .;locus=RLOC_00010237
Chr1	stalkie_big_nohaplotig	exon	112048566	112049024	100	-	.	Parent=comp113749_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112048777	112048926	.	-	0	Parent=comp113749_c0_seq1.mrna1
Chr1	gffcl	locus	112049930	112050570	.	-	.	ID=RLOC_00010238;geneIDs=comp151228_c0_seq1.path1;transcripts=comp151228_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112049930	112050570	.	-	.	ID=comp151228_c0_seq1.mrna1;geneID=comp151228_c0_seq1.path1;Name=comp151228_c0_seq1;Dir=indeterminatecoverage=56.3;identity=94.5;matches=633;mismatches=8;indels=29;unknowns=0;Target=comp151228_c0_seq1 1191 522 .;CDS_Target=comp151228_c0_seq1 554 522 .;locus=RLOC_00010238
Chr1	stalkie_big_nohaplotig	exon	112049930	112050570	94	-	.	Parent=comp151228_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112050551	112050570	.	-	0	Parent=comp151228_c0_seq1.mrna1
Chr1	gffcl	locus	112051482	112052359	.	-	.	ID=RLOC_00010239;geneIDs=comp153091_c0_seq1.path1;transcripts=comp153091_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112051482	112052359	.	-	.	ID=comp153091_c0_seq1.mrna1;geneID=comp153091_c0_seq1.path1;Name=comp153091_c0_seq1;Dir=indeterminatecoverage=94.5;identity=95.7;matches=845;mismatches=33;indels=5;unknowns=0;Target=comp153091_c0_seq1 934 52 .;CDS_Target=comp153091_c0_seq1 856 788 .;locus=RLOC_00010239
Chr1	stalkie_big_nohaplotig	exon	112051482	112052359	95	-	.	Parent=comp153091_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112051560	112051628	.	-	0	Parent=comp153091_c0_seq1.mrna1
Chr1	gffcl	locus	112053278	112053604	.	-	.	ID=RLOC_00010240;geneIDs=comp133128_c0_seq1.path1;transcripts=comp133128_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112053278	112053604	.	-	.	ID=comp133128_c0_seq1.mrna1;geneID=comp133128_c0_seq1.path1;Name=comp133128_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=326;mismatches=1;indels=0;unknowns=0;Target=comp133128_c0_seq1 327 1 .;CDS_Target=comp133128_c0_seq1 265 176 .;locus=RLOC_00010240
Chr1	stalkie_big_nohaplotig	exon	112053278	112053604	99	-	.	Parent=comp133128_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112053340	112053429	.	-	0	Parent=comp133128_c0_seq1.mrna1
Chr1	gffcl	locus	112066722	112067343	.	+	.	ID=RLOC_00010241;geneIDs=comp156573_c0_seq1.path1;transcripts=comp156573_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112066722	112067343	.	+	.	ID=comp156573_c0_seq1.mrna1;geneID=comp156573_c0_seq1.path1;Name=comp156573_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=621;mismatches=1;indels=0;unknowns=0;Target=comp156573_c0_seq1 622 1 .;CDS_Target=comp156573_c0_seq1 142 2 .;locus=RLOC_00010241
Chr1	stalkie_big_nohaplotig	exon	112066722	112067343	99	+	.	Parent=comp156573_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112066723	112066863	.	+	0	Parent=comp156573_c0_seq1.mrna1
Chr1	gffcl	locus	112077146	112077767	.	+	.	ID=RLOC_00010242;geneIDs=comp156573_c0_seq1.path2;transcripts=comp156573_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	112077146	112077767	.	+	.	ID=comp156573_c0_seq1.mrna2;geneID=comp156573_c0_seq1.path2;Name=comp156573_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=621;mismatches=1;indels=0;unknowns=0;Target=comp156573_c0_seq1 622 1 .;CDS_Target=comp156573_c0_seq1 142 2 .;locus=RLOC_00010242
Chr1	stalkie_big_nohaplotig	exon	112077146	112077767	99	+	.	Parent=comp156573_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	112077147	112077287	.	+	0	Parent=comp156573_c0_seq1.mrna2
Chr1	gffcl	locus	112201247	112202574	.	+	.	ID=RLOC_00010244;geneIDs=FBgn0030799.1.path1;transcripts=FBgn0030799.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112201247	112202574	.	+	.	ID=FBgn0030799.1.mrna1;geneID=FBgn0030799.1.path1;Name=FBgn0030799.1;Dir=sensecoverage=100.0;identity=99.0;matches=1087;mismatches=11;indels=0;unknowns=0;locus=RLOC_00010244
Chr1	stalkie_big_nohaplotig	exon	112201247	112201299	100	+	.	Parent=FBgn0030799.1.mrna1;Target=FBgn0030799.1 1 53 +
Chr1	stalkie_big_nohaplotig	exon	112201355	112202163	99	+	.	Parent=FBgn0030799.1.mrna1;Target=FBgn0030799.1 54 862 +
Chr1	stalkie_big_nohaplotig	exon	112202265	112202447	99	+	.	Parent=FBgn0030799.1.mrna1;Target=FBgn0030799.1 863 1045 +
Chr1	stalkie_big_nohaplotig	exon	112202522	112202574	96	+	.	Parent=FBgn0030799.1.mrna1;Target=FBgn0030799.1 1046 1098 +
Chr1	stalkie_big_nohaplotig	CDS	112201247	112201299	.	+	0	Parent=FBgn0030799.1.mrna1;Target=FBgn0030799.1 1 53 +
Chr1	stalkie_big_nohaplotig	CDS	112201355	112202163	.	+	1	Parent=FBgn0030799.1.mrna1;Target=FBgn0030799.1 54 862 +
Chr1	stalkie_big_nohaplotig	CDS	112202265	112202447	.	+	2	Parent=FBgn0030799.1.mrna1;Target=FBgn0030799.1 863 1045 +
Chr1	stalkie_big_nohaplotig	CDS	112202522	112202574	.	+	2	Parent=FBgn0030799.1.mrna1;Target=FBgn0030799.1 1046 1098 +
Chr1	gffcl	locus	112206869	112207633	.	-	.	ID=RLOC_00010245;geneIDs=comp116294_c0_seq1.path1;transcripts=comp116294_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112206869	112207633	.	-	.	ID=comp116294_c0_seq1.mrna1;geneID=comp116294_c0_seq1.path1;Name=comp116294_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=762;mismatches=3;indels=0;unknowns=0;Target=comp116294_c0_seq1 765 1 .;CDS_Target=comp116294_c0_seq1 626 480 .;locus=RLOC_00010245
Chr1	stalkie_big_nohaplotig	exon	112206869	112207633	99	-	.	Parent=comp116294_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112207008	112207154	.	-	0	Parent=comp116294_c0_seq1.mrna1
Chr1	gffcl	locus	112209905	112344531	.	-	.	ID=RLOC_00010246;geneIDs=FBgn0086899.1.path1,comp156707_c10_seq1.path1;transcripts=comp156707_c10_seq1.mrna1,FBgn0086899.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112209905	112344531	.	-	.	ID=comp156707_c10_seq1.mrna1;geneID=comp156707_c10_seq1.path1;Name=comp156707_c10_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=4286;mismatches=15;indels=11;unknowns=0;locus=RLOC_00010246
Chr1	stalkie_big_nohaplotig	exon	112209905	112210046	100	-	.	Parent=comp156707_c10_seq1.mrna1;Target=comp156707_c10_seq1 1 142 -
Chr1	stalkie_big_nohaplotig	exon	112210129	112210348	100	-	.	Parent=comp156707_c10_seq1.mrna1;Target=comp156707_c10_seq1 143 362 -
Chr1	stalkie_big_nohaplotig	exon	112212686	112212891	100	-	.	Parent=comp156707_c10_seq1.mrna1;Target=comp156707_c10_seq1 363 568 -
Chr1	stalkie_big_nohaplotig	exon	112212970	112213162	99	-	.	Parent=comp156707_c10_seq1.mrna1;Target=comp156707_c10_seq1 569 761 -
Chr1	stalkie_big_nohaplotig	exon	112213227	112213405	99	-	.	Parent=comp156707_c10_seq1.mrna1;Target=comp156707_c10_seq1 762 940 -
Chr1	stalkie_big_nohaplotig	exon	112213476	112215691	99	-	.	Parent=comp156707_c10_seq1.mrna1;Target=comp156707_c10_seq1 941 3156 -
Chr1	stalkie_big_nohaplotig	exon	112216977	112217088	100	-	.	Parent=comp156707_c10_seq1.mrna1;Target=comp156707_c10_seq1 3157 3268 -
Chr1	stalkie_big_nohaplotig	exon	112340469	112340556	100	-	.	Parent=comp156707_c10_seq1.mrna1;Target=comp156707_c10_seq1 3269 3356 -
Chr1	stalkie_big_nohaplotig	exon	112340620	112340743	100	-	.	Parent=comp156707_c10_seq1.mrna1;Target=comp156707_c10_seq1 3357 3480 -
Chr1	stalkie_big_nohaplotig	exon	112343711	112344531	97	-	.	Parent=comp156707_c10_seq1.mrna1;Target=comp156707_c10_seq1 3481 4312 -
Chr1	stalkie_big_nohaplotig	CDS	112209906	112210046	.	-	0	Parent=comp156707_c10_seq1.mrna1;Target=comp156707_c10_seq1 2 142 .
Chr1	stalkie_big_nohaplotig	CDS	112210129	112210348	.	-	1	Parent=comp156707_c10_seq1.mrna1;Target=comp156707_c10_seq1 143 362 .
Chr1	stalkie_big_nohaplotig	CDS	112212686	112212891	.	-	0	Parent=comp156707_c10_seq1.mrna1;Target=comp156707_c10_seq1 363 568 .
Chr1	stalkie_big_nohaplotig	CDS	112212970	112213162	.	-	1	Parent=comp156707_c10_seq1.mrna1;Target=comp156707_c10_seq1 569 761 .
Chr1	stalkie_big_nohaplotig	CDS	112213227	112213405	.	-	0	Parent=comp156707_c10_seq1.mrna1;Target=comp156707_c10_seq1 762 940 .
Chr1	stalkie_big_nohaplotig	CDS	112213476	112215691	.	-	2	Parent=comp156707_c10_seq1.mrna1;Target=comp156707_c10_seq1 941 3156 .
Chr1	stalkie_big_nohaplotig	CDS	112216977	112217088	.	-	0	Parent=comp156707_c10_seq1.mrna1;Target=comp156707_c10_seq1 3157 3268 .
Chr1	stalkie_big_nohaplotig	CDS	112340469	112340540	.	-	0	Parent=comp156707_c10_seq1.mrna1;Target=comp156707_c10_seq1 3269 3340 .
Chr1	stalkie_big_nohaplotig	mRNA	112209906	112217683	.	-	.	ID=FBgn0086899.1.mrna1;geneID=FBgn0086899.1.path1;Name=FBgn0086899.1;Dir=sensecoverage=100.0;identity=99.8;matches=3299;mismatches=7;indels=0;unknowns=0;locus=RLOC_00010246
Chr1	stalkie_big_nohaplotig	exon	112209906	112210046	100	-	.	Parent=FBgn0086899.1.mrna1;Target=FBgn0086899.1 3166 3306 +
Chr1	stalkie_big_nohaplotig	exon	112210129	112210348	100	-	.	Parent=FBgn0086899.1.mrna1;Target=FBgn0086899.1 2946 3165 +
Chr1	stalkie_big_nohaplotig	exon	112212686	112212891	100	-	.	Parent=FBgn0086899.1.mrna1;Target=FBgn0086899.1 2740 2945 +
Chr1	stalkie_big_nohaplotig	exon	112212970	112213162	99	-	.	Parent=FBgn0086899.1.mrna1;Target=FBgn0086899.1 2547 2739 +
Chr1	stalkie_big_nohaplotig	exon	112213227	112213405	99	-	.	Parent=FBgn0086899.1.mrna1;Target=FBgn0086899.1 2368 2546 +
Chr1	stalkie_big_nohaplotig	exon	112213476	112215691	99	-	.	Parent=FBgn0086899.1.mrna1;Target=FBgn0086899.1 152 2367 +
Chr1	stalkie_big_nohaplotig	exon	112216977	112217088	100	-	.	Parent=FBgn0086899.1.mrna1;Target=FBgn0086899.1 40 151 +
Chr1	stalkie_big_nohaplotig	exon	112217645	112217683	100	-	.	Parent=FBgn0086899.1.mrna1;Target=FBgn0086899.1 1 39 +
Chr1	stalkie_big_nohaplotig	CDS	112209906	112210046	.	-	0	Parent=FBgn0086899.1.mrna1;Target=FBgn0086899.1 3166 3306 +
Chr1	stalkie_big_nohaplotig	CDS	112210129	112210348	.	-	1	Parent=FBgn0086899.1.mrna1;Target=FBgn0086899.1 2946 3165 +
Chr1	stalkie_big_nohaplotig	CDS	112212686	112212891	.	-	0	Parent=FBgn0086899.1.mrna1;Target=FBgn0086899.1 2740 2945 +
Chr1	stalkie_big_nohaplotig	CDS	112212970	112213162	.	-	1	Parent=FBgn0086899.1.mrna1;Target=FBgn0086899.1 2547 2739 +
Chr1	stalkie_big_nohaplotig	CDS	112213227	112213405	.	-	0	Parent=FBgn0086899.1.mrna1;Target=FBgn0086899.1 2368 2546 +
Chr1	stalkie_big_nohaplotig	CDS	112213476	112215691	.	-	2	Parent=FBgn0086899.1.mrna1;Target=FBgn0086899.1 152 2367 +
Chr1	stalkie_big_nohaplotig	CDS	112216977	112217088	.	-	0	Parent=FBgn0086899.1.mrna1;Target=FBgn0086899.1 40 151 +
Chr1	stalkie_big_nohaplotig	CDS	112217645	112217683	.	-	0	Parent=FBgn0086899.1.mrna1;Target=FBgn0086899.1 1 39 +
Chr1	gffcl	locus	112275228	112276876	.	+	.	ID=RLOC_00010247;geneIDs=comp153157_c0_seq1.path1;transcripts=comp153157_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112275228	112276876	.	+	.	ID=comp153157_c0_seq1.mrna1;geneID=comp153157_c0_seq1.path1;Name=comp153157_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1644;mismatches=5;indels=7;unknowns=0;Target=comp153157_c0_seq1 1656 1 .;CDS_Target=comp153157_c0_seq1 1086 931 .;locus=RLOC_00010247
Chr1	stalkie_big_nohaplotig	exon	112275228	112276876	99	+	.	Parent=comp153157_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112276158	112276313	.	+	0	Parent=comp153157_c0_seq1.mrna1
Chr1	gffcl	locus	112335715	112336567	.	-	.	ID=RLOC_00010248;geneIDs=comp151058_c0_seq1.path1;transcripts=comp151058_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112335715	112336567	.	-	.	ID=comp151058_c0_seq1.mrna1;geneID=comp151058_c0_seq1.path1;Name=comp151058_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=849;mismatches=3;indels=1;unknowns=0;Target=comp151058_c0_seq1 852 1 .;CDS_Target=comp151058_c0_seq1 215 108 .;locus=RLOC_00010248
Chr1	stalkie_big_nohaplotig	exon	112335715	112336567	99	-	.	Parent=comp151058_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112336353	112336460	.	-	0	Parent=comp151058_c0_seq1.mrna1
Chr1	gffcl	locus	112336657	112337252	.	+	.	ID=RLOC_00010249;geneIDs=comp147688_c0_seq1.path1;transcripts=comp147688_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112336657	112337252	.	+	.	ID=comp147688_c0_seq1.mrna1;geneID=comp147688_c0_seq1.path1;Name=comp147688_c0_seq1;Dir=indeterminatecoverage=94.5;identity=94.3;matches=566;mismatches=28;indels=6;unknowns=0;Target=comp147688_c0_seq1 599 2 .;CDS_Target=comp147688_c0_seq1 81 4 .;locus=RLOC_00010249
Chr1	stalkie_big_nohaplotig	exon	112336657	112337252	94	+	.	Parent=comp147688_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112336659	112336736	.	+	0	Parent=comp147688_c0_seq1.mrna1
Chr1	gffcl	locus	112351010	112351644	.	-	.	ID=RLOC_00010250;geneIDs=FBgn0025637.1.path1;transcripts=FBgn0025637.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112351010	112351644	.	-	.	ID=FBgn0025637.1.mrna1;geneID=FBgn0025637.1.path1;Name=FBgn0025637.1;Dir=sensecoverage=100.0;identity=99.4;matches=537;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010250
Chr1	stalkie_big_nohaplotig	exon	112351010	112351508	99	-	.	Parent=FBgn0025637.1.mrna1;Target=FBgn0025637.1 42 540 +
Chr1	stalkie_big_nohaplotig	exon	112351604	112351644	100	-	.	Parent=FBgn0025637.1.mrna1;Target=FBgn0025637.1 1 41 +
Chr1	stalkie_big_nohaplotig	CDS	112351010	112351508	.	-	1	Parent=FBgn0025637.1.mrna1;Target=FBgn0025637.1 42 540 +
Chr1	stalkie_big_nohaplotig	CDS	112351604	112351644	.	-	0	Parent=FBgn0025637.1.mrna1;Target=FBgn0025637.1 1 41 +
Chr1	gffcl	locus	112351523	112351574	.	+	.	ID=RLOC_00010251;geneIDs=comp156639_c0_seq1.path2;transcripts=comp156639_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	112351523	112351574	.	+	.	ID=comp156639_c0_seq1.mrna2;geneID=comp156639_c0_seq1.path2;Name=comp156639_c0_seq1;Dir=indeterminatecoverage=2.4;identity=96.2;matches=50;mismatches=2;indels=0;unknowns=0;Target=comp156639_c0_seq1 2179 2128 .;locus=RLOC_00010251
Chr1	stalkie_big_nohaplotig	exon	112351523	112351574	96	+	.	Parent=comp156639_c0_seq1.mrna2
Chr1	gffcl	locus	112356641	112361123	.	-	.	ID=RLOC_00010252;geneIDs=comp161100_c0_seq1.path1;transcripts=comp161100_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112356641	112361123	.	-	.	ID=comp161100_c0_seq1.mrna1;geneID=comp161100_c0_seq1.path1;Name=comp161100_c0_seq1;Dir=antisensecoverage=100.0;identity=96.3;matches=3321;mismatches=64;indels=64;unknowns=0;locus=RLOC_00010252
Chr1	stalkie_big_nohaplotig	exon	112356641	112356700	100	-	.	Parent=comp161100_c0_seq1.mrna1;Target=comp161100_c0_seq1 2 61 -
Chr1	stalkie_big_nohaplotig	exon	112357428	112358654	98	-	.	Parent=comp161100_c0_seq1.mrna1;Target=comp161100_c0_seq1 62 1291 -
Chr1	stalkie_big_nohaplotig	exon	112358895	112360400	93	-	.	Parent=comp161100_c0_seq1.mrna1;Target=comp161100_c0_seq1 1292 2833 -
Chr1	stalkie_big_nohaplotig	exon	112360461	112360674	100	-	.	Parent=comp161100_c0_seq1.mrna1;Target=comp161100_c0_seq1 2834 3047 -
Chr1	stalkie_big_nohaplotig	exon	112360734	112361123	98	-	.	Parent=comp161100_c0_seq1.mrna1;Target=comp161100_c0_seq1 3048 3438 -
Chr1	stalkie_big_nohaplotig	CDS	112360503	112360674	.	-	1	Parent=comp161100_c0_seq1.mrna1;Target=comp161100_c0_seq1 2876 3047 .
Chr1	stalkie_big_nohaplotig	CDS	112360734	112360891	.	-	0	Parent=comp161100_c0_seq1.mrna1;Target=comp161100_c0_seq1 3048 3205 .
Chr1	gffcl	locus	112363439	112375882	.	+	.	ID=RLOC_00010253;geneIDs=FBgn0025639.1.path1,comp154425_c0_seq1.path1,comp161624_c2_seq1.path1;transcripts=comp161624_c2_seq1.mrna1,FBgn0025639.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112363439	112374456	.	+	.	ID=comp161624_c2_seq1.mrna1;geneID=comp161624_c2_seq1.path1;Name=comp161624_c2_seq1;Dir=antisensecoverage=60.6;identity=98.2;matches=3266;mismatches=20;indels=39;unknowns=0;locus=RLOC_00010253
Chr1	stalkie_big_nohaplotig	exon	112363439	112363967	99	+	.	Parent=comp161624_c2_seq1.mrna1;Target=comp161624_c2_seq1 4895 5423 -
Chr1	stalkie_big_nohaplotig	exon	112365269	112365777	99	+	.	Parent=comp161624_c2_seq1.mrna1;Target=comp161624_c2_seq1 4386 4894 -
Chr1	stalkie_big_nohaplotig	exon	112365834	112367478	99	+	.	Parent=comp161624_c2_seq1.mrna1;Target=comp161624_c2_seq1 2741 4385 -
Chr1	stalkie_big_nohaplotig	exon	112373815	112374456	92	+	.	Parent=comp161624_c2_seq1.mrna1;Target=comp161624_c2_seq1 2138 2740 -
Chr1	stalkie_big_nohaplotig	CDS	112365283	112365777	.	+	0	Parent=comp161624_c2_seq1.mrna1;Target=comp161624_c2_seq1 4386 4880 .
Chr1	stalkie_big_nohaplotig	CDS	112365834	112367478	.	+	0	Parent=comp161624_c2_seq1.mrna1;Target=comp161624_c2_seq1 2741 4385 .
Chr1	stalkie_big_nohaplotig	CDS	112373815	112374455	.	+	2	Parent=comp161624_c2_seq1.mrna1;Target=comp161624_c2_seq1 2139 2740 .
Chr1	stalkie_big_nohaplotig	mRNA	112365267	112369067	.	+	.	ID=FBgn0025639.1.mrna1;geneID=FBgn0025639.1.path1;Name=FBgn0025639.1;Dir=sensecoverage=99.9;identity=99.6;matches=3732;mismatches=13;indels=3;unknowns=0;locus=RLOC_00010253
Chr1	stalkie_big_nohaplotig	exon	112365267	112365777	99	+	.	Parent=FBgn0025639.1.mrna1;Target=FBgn0025639.1 3 513 +
Chr1	stalkie_big_nohaplotig	exon	112365834	112369067	99	+	.	Parent=FBgn0025639.1.mrna1;Target=FBgn0025639.1 514 3750 +
Chr1	stalkie_big_nohaplotig	CDS	112365268	112365777	.	+	0	Parent=FBgn0025639.1.mrna1;Target=FBgn0025639.1 4 513 +
Chr1	stalkie_big_nohaplotig	CDS	112365834	112369067	.	+	0	Parent=FBgn0025639.1.mrna1;Target=FBgn0025639.1 514 3750 +
Chr1	gffcl	locus	112376539	112376874	.	+	.	ID=RLOC_00010254;geneIDs=comp268596_c0_seq1.path1;transcripts=comp268596_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112376539	112376874	.	+	.	ID=comp268596_c0_seq1.mrna1;geneID=comp268596_c0_seq1.path1;Name=comp268596_c0_seq1;Dir=indeterminatecoverage=98.5;identity=99.4;matches=335;mismatches=1;indels=1;unknowns=0;Target=comp268596_c0_seq1 342 6 .;CDS_Target=comp268596_c0_seq1 310 257 .;locus=RLOC_00010254
Chr1	stalkie_big_nohaplotig	exon	112376539	112376874	99	+	.	Parent=comp268596_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112376789	112376842	.	+	0	Parent=comp268596_c0_seq1.mrna1
Chr1	gffcl	locus	112382194	112382819	.	-	.	ID=RLOC_00010255;geneIDs=FBgn0025638.3.path1;transcripts=FBgn0025638.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112382194	112382819	.	-	.	ID=FBgn0025638.3.mrna1;geneID=FBgn0025638.3.path1;Name=FBgn0025638.3;Dir=sensecoverage=100.0;identity=98.2;matches=381;mismatches=3;indels=4;unknowns=0;locus=RLOC_00010255
Chr1	stalkie_big_nohaplotig	exon	112382194	112382411	99	-	.	Parent=FBgn0025638.3.mrna1;Target=FBgn0025638.3 170 387 +
Chr1	stalkie_big_nohaplotig	exon	112382527	112382554	100	-	.	Parent=FBgn0025638.3.mrna1;Target=FBgn0025638.3 142 169 +
Chr1	stalkie_big_nohaplotig	exon	112382619	112382727	95	-	.	Parent=FBgn0025638.3.mrna1;Target=FBgn0025638.3 31 141 +
Chr1	stalkie_big_nohaplotig	exon	112382790	112382819	96	-	.	Parent=FBgn0025638.3.mrna1;Target=FBgn0025638.3 1 30 +
Chr1	stalkie_big_nohaplotig	CDS	112382705	112382727	.	-	1	Parent=FBgn0025638.3.mrna1;Target=FBgn0025638.3 31 52 +
Chr1	stalkie_big_nohaplotig	CDS	112382790	112382818	.	-	0	Parent=FBgn0025638.3.mrna1;Target=FBgn0025638.3 2 30 +
Chr1	gffcl	locus	112388437	112388913	.	-	.	ID=RLOC_00010256;geneIDs=comp152325_c1_seq1.path1;transcripts=comp152325_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112388437	112388913	.	-	.	ID=comp152325_c1_seq1.mrna1;geneID=comp152325_c1_seq1.path1;Name=comp152325_c1_seq1;Dir=indeterminatecoverage=99.6;identity=97.3;matches=464;mismatches=12;indels=1;unknowns=0;Target=comp152325_c1_seq1 476 1 .;CDS_Target=comp152325_c1_seq1 417 94 .;locus=RLOC_00010256
Chr1	stalkie_big_nohaplotig	exon	112388437	112388913	97	-	.	Parent=comp152325_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112388496	112388819	.	-	0	Parent=comp152325_c1_seq1.mrna1
Chr1	gffcl	locus	112428330	112432089	.	+	.	ID=RLOC_00010257;geneIDs=FBgn0031514.1.path1;transcripts=FBgn0031514.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112428330	112432089	.	+	.	ID=FBgn0031514.1.mrna1;geneID=FBgn0031514.1.path1;Name=FBgn0031514.1;Dir=sensecoverage=100.0;identity=99.3;matches=2255;mismatches=16;indels=0;unknowns=0;locus=RLOC_00010257
Chr1	stalkie_big_nohaplotig	exon	112428330	112428778	99	+	.	Parent=FBgn0031514.1.mrna1;Target=FBgn0031514.1 1 449 +
Chr1	stalkie_big_nohaplotig	exon	112428860	112428991	98	+	.	Parent=FBgn0031514.1.mrna1;Target=FBgn0031514.1 450 581 +
Chr1	stalkie_big_nohaplotig	exon	112429072	112429289	99	+	.	Parent=FBgn0031514.1.mrna1;Target=FBgn0031514.1 582 799 +
Chr1	stalkie_big_nohaplotig	exon	112430553	112431509	99	+	.	Parent=FBgn0031514.1.mrna1;Target=FBgn0031514.1 800 1756 +
Chr1	stalkie_big_nohaplotig	exon	112431575	112432089	98	+	.	Parent=FBgn0031514.1.mrna1;Target=FBgn0031514.1 1757 2271 +
Chr1	stalkie_big_nohaplotig	CDS	112428330	112428778	.	+	0	Parent=FBgn0031514.1.mrna1;Target=FBgn0031514.1 1 449 +
Chr1	stalkie_big_nohaplotig	CDS	112428860	112428991	.	+	1	Parent=FBgn0031514.1.mrna1;Target=FBgn0031514.1 450 581 +
Chr1	stalkie_big_nohaplotig	CDS	112429072	112429289	.	+	1	Parent=FBgn0031514.1.mrna1;Target=FBgn0031514.1 582 799 +
Chr1	stalkie_big_nohaplotig	CDS	112430553	112431509	.	+	2	Parent=FBgn0031514.1.mrna1;Target=FBgn0031514.1 800 1756 +
Chr1	stalkie_big_nohaplotig	CDS	112431575	112432089	.	+	2	Parent=FBgn0031514.1.mrna1;Target=FBgn0031514.1 1757 2271 +
Chr1	gffcl	locus	112440071	112440975	.	+	.	ID=RLOC_00010258;geneIDs=comp149492_c0_seq1.path1;transcripts=comp149492_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112440071	112440975	.	+	.	ID=comp149492_c0_seq1.mrna1;geneID=comp149492_c0_seq1.path1;Name=comp149492_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.6;matches=902;mismatches=3;indels=1;unknowns=0;Target=comp149492_c0_seq1 906 1 .;CDS_Target=comp149492_c0_seq1 779 675 .;locus=RLOC_00010258
Chr1	stalkie_big_nohaplotig	exon	112440071	112440975	99	+	.	Parent=comp149492_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112440745	112440848	.	+	0	Parent=comp149492_c0_seq1.mrna1
Chr1	gffcl	locus	112502461	112503456	.	+	.	ID=RLOC_00010259;geneIDs=Caenorhabditis.path3,comp147589_c0_seq1.path3;transcripts=comp147589_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	112502461	112503456	.	+	.	ID=comp147589_c0_seq1.mrna3;geneID=comp147589_c0_seq1.path3;Name=comp147589_c0_seq1;Dir=indeterminatecoverage=88.0;identity=99.4;matches=990;mismatches=6;indels=0;unknowns=0;Target=comp147589_c0_seq1 996 1 .;CDS_Target=comp147589_c0_seq1 874 2 .;locus=RLOC_00010259
Chr1	stalkie_big_nohaplotig	exon	112502461	112503456	99	+	.	Parent=comp147589_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	112502462	112503334	.	+	0	Parent=comp147589_c0_seq1.mrna3
Chr1	gffcl	locus	112565803	112566815	.	-	.	ID=RLOC_00010260;geneIDs=FBgn0025378.6.path1;transcripts=FBgn0025378.6.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112565803	112566815	.	-	.	ID=FBgn0025378.6.mrna1;geneID=FBgn0025378.6.path1;Name=FBgn0025378.6;Dir=sensecoverage=100.0;identity=99.9;matches=896;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010260
Chr1	stalkie_big_nohaplotig	exon	112565803	112566156	99	-	.	Parent=FBgn0025378.6.mrna1;Target=FBgn0025378.6 544 897 +
Chr1	stalkie_big_nohaplotig	exon	112566214	112566490	100	-	.	Parent=FBgn0025378.6.mrna1;Target=FBgn0025378.6 267 543 +
Chr1	stalkie_big_nohaplotig	exon	112566550	112566815	100	-	.	Parent=FBgn0025378.6.mrna1;Target=FBgn0025378.6 1 266 +
Chr1	stalkie_big_nohaplotig	CDS	112565803	112566156	.	-	0	Parent=FBgn0025378.6.mrna1;Target=FBgn0025378.6 544 897 +
Chr1	stalkie_big_nohaplotig	CDS	112566214	112566490	.	-	1	Parent=FBgn0025378.6.mrna1;Target=FBgn0025378.6 267 543 +
Chr1	stalkie_big_nohaplotig	CDS	112566550	112566815	.	-	0	Parent=FBgn0025378.6.mrna1;Target=FBgn0025378.6 1 266 +
Chr1	gffcl	locus	112617114	112618003	.	-	.	ID=RLOC_00010261;geneIDs=FBgn0025378.12.path1;transcripts=FBgn0025378.12.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112617114	112618003	.	-	.	ID=FBgn0025378.12.mrna1;geneID=FBgn0025378.12.path1;Name=FBgn0025378.12;Dir=sensecoverage=100.0;identity=98.8;matches=762;mismatches=8;indels=1;unknowns=0;locus=RLOC_00010261
Chr1	stalkie_big_nohaplotig	exon	112617114	112617325	99	-	.	Parent=FBgn0025378.12.mrna1;Target=FBgn0025378.12 559 771 +
Chr1	stalkie_big_nohaplotig	exon	112617388	112617676	98	-	.	Parent=FBgn0025378.12.mrna1;Target=FBgn0025378.12 270 558 +
Chr1	stalkie_big_nohaplotig	exon	112617735	112618003	98	-	.	Parent=FBgn0025378.12.mrna1;Target=FBgn0025378.12 1 269 +
Chr1	stalkie_big_nohaplotig	CDS	112617114	112617325	.	-	0	Parent=FBgn0025378.12.mrna1;Target=FBgn0025378.12 559 771 +
Chr1	stalkie_big_nohaplotig	CDS	112617388	112617676	.	-	1	Parent=FBgn0025378.12.mrna1;Target=FBgn0025378.12 270 558 +
Chr1	stalkie_big_nohaplotig	CDS	112617735	112618003	.	-	0	Parent=FBgn0025378.12.mrna1;Target=FBgn0025378.12 1 269 +
Chr1	gffcl	locus	112622192	112623379	.	-	.	ID=RLOC_00010262;geneIDs=FBgn0025378.5.path1;transcripts=FBgn0025378.5.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112622192	112623379	.	-	.	ID=FBgn0025378.5.mrna1;geneID=FBgn0025378.5.path1;Name=FBgn0025378.5;Dir=sensecoverage=100.0;identity=99.6;matches=896;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010262
Chr1	stalkie_big_nohaplotig	exon	112622192	112622566	98	-	.	Parent=FBgn0025378.5.mrna1;Target=FBgn0025378.5 526 900 +
Chr1	stalkie_big_nohaplotig	exon	112622798	112623077	100	-	.	Parent=FBgn0025378.5.mrna1;Target=FBgn0025378.5 246 525 +
Chr1	stalkie_big_nohaplotig	exon	112623135	112623379	100	-	.	Parent=FBgn0025378.5.mrna1;Target=FBgn0025378.5 1 245 +
Chr1	stalkie_big_nohaplotig	CDS	112622192	112622566	.	-	0	Parent=FBgn0025378.5.mrna1;Target=FBgn0025378.5 526 900 +
Chr1	stalkie_big_nohaplotig	CDS	112622798	112623077	.	-	1	Parent=FBgn0025378.5.mrna1;Target=FBgn0025378.5 246 525 +
Chr1	stalkie_big_nohaplotig	CDS	112623135	112623379	.	-	0	Parent=FBgn0025378.5.mrna1;Target=FBgn0025378.5 1 245 +
Chr1	gffcl	locus	112627433	112629489	.	-	.	ID=RLOC_00010263;geneIDs=FBgn0025378.7.path1;transcripts=FBgn0025378.7.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112627433	112629489	.	-	.	ID=FBgn0025378.7.mrna1;geneID=FBgn0025378.7.path1;Name=FBgn0025378.7;Dir=sensecoverage=100.0;identity=100.0;matches=1692;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010263
Chr1	stalkie_big_nohaplotig	exon	112627433	112627792	100	-	.	Parent=FBgn0025378.7.mrna1;Target=FBgn0025378.7 1333 1692 +
Chr1	stalkie_big_nohaplotig	exon	112627854	112628127	100	-	.	Parent=FBgn0025378.7.mrna1;Target=FBgn0025378.7 1059 1332 +
Chr1	stalkie_big_nohaplotig	exon	112628191	112628395	100	-	.	Parent=FBgn0025378.7.mrna1;Target=FBgn0025378.7 854 1058 +
Chr1	stalkie_big_nohaplotig	exon	112628453	112628729	100	-	.	Parent=FBgn0025378.7.mrna1;Target=FBgn0025378.7 577 853 +
Chr1	stalkie_big_nohaplotig	exon	112628787	112629057	100	-	.	Parent=FBgn0025378.7.mrna1;Target=FBgn0025378.7 306 576 +
Chr1	stalkie_big_nohaplotig	exon	112629128	112629407	100	-	.	Parent=FBgn0025378.7.mrna1;Target=FBgn0025378.7 26 305 +
Chr1	stalkie_big_nohaplotig	exon	112629465	112629489	100	-	.	Parent=FBgn0025378.7.mrna1;Target=FBgn0025378.7 1 25 +
Chr1	stalkie_big_nohaplotig	CDS	112627433	112627792	.	-	0	Parent=FBgn0025378.7.mrna1;Target=FBgn0025378.7 1333 1692 +
Chr1	stalkie_big_nohaplotig	CDS	112627854	112628127	.	-	1	Parent=FBgn0025378.7.mrna1;Target=FBgn0025378.7 1059 1332 +
Chr1	stalkie_big_nohaplotig	CDS	112628191	112628395	.	-	2	Parent=FBgn0025378.7.mrna1;Target=FBgn0025378.7 854 1058 +
Chr1	stalkie_big_nohaplotig	CDS	112628453	112628729	.	-	0	Parent=FBgn0025378.7.mrna1;Target=FBgn0025378.7 577 853 +
Chr1	stalkie_big_nohaplotig	CDS	112628787	112629057	.	-	1	Parent=FBgn0025378.7.mrna1;Target=FBgn0025378.7 306 576 +
Chr1	stalkie_big_nohaplotig	CDS	112629128	112629407	.	-	2	Parent=FBgn0025378.7.mrna1;Target=FBgn0025378.7 26 305 +
Chr1	stalkie_big_nohaplotig	CDS	112629465	112629489	.	-	0	Parent=FBgn0025378.7.mrna1;Target=FBgn0025378.7 1 25 +
Chr1	gffcl	locus	112632051	112633125	.	-	.	ID=RLOC_00010264;geneIDs=FBgn0025378.3.path1;transcripts=FBgn0025378.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112632051	112633125	.	-	.	ID=FBgn0025378.3.mrna1;geneID=FBgn0025378.3.path1;Name=FBgn0025378.3;Dir=sensecoverage=99.7;identity=100.0;matches=945;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010264
Chr1	stalkie_big_nohaplotig	exon	112632051	112632404	100	-	.	Parent=FBgn0025378.3.mrna1;Target=FBgn0025378.3 595 948 +
Chr1	stalkie_big_nohaplotig	exon	112632466	112632739	100	-	.	Parent=FBgn0025378.3.mrna1;Target=FBgn0025378.3 321 594 +
Chr1	stalkie_big_nohaplotig	exon	112632809	112633125	100	-	.	Parent=FBgn0025378.3.mrna1;Target=FBgn0025378.3 4 320 +
Chr1	stalkie_big_nohaplotig	CDS	112632051	112632404	.	-	0	Parent=FBgn0025378.3.mrna1;Target=FBgn0025378.3 595 948 +
Chr1	stalkie_big_nohaplotig	CDS	112632466	112632739	.	-	1	Parent=FBgn0025378.3.mrna1;Target=FBgn0025378.3 321 594 +
Chr1	stalkie_big_nohaplotig	CDS	112632809	112633125	.	-	0	Parent=FBgn0025378.3.mrna1;Target=FBgn0025378.3 4 320 +
Chr1	gffcl	locus	112633971	112634415	.	+	.	ID=RLOC_00010265;geneIDs=comp113520_c0_seq1.path1;transcripts=comp113520_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112633971	112634415	.	+	.	ID=comp113520_c0_seq1.mrna1;geneID=comp113520_c0_seq1.path1;Name=comp113520_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=437;mismatches=8;indels=0;unknowns=0;Target=comp113520_c0_seq1 445 1 .;CDS_Target=comp113520_c0_seq1 13 2 .;locus=RLOC_00010265
Chr1	stalkie_big_nohaplotig	exon	112633971	112634415	98	+	.	Parent=comp113520_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112633972	112633983	.	+	0	Parent=comp113520_c0_seq1.mrna1
Chr1	gffcl	locus	112688445	112690498	.	-	.	ID=RLOC_00010266;geneIDs=FBgn0001565.1.path1;transcripts=FBgn0001565.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112688445	112690498	.	-	.	ID=FBgn0001565.1.mrna1;geneID=FBgn0001565.1.path1;Name=FBgn0001565.1;Dir=sensecoverage=100.0;identity=99.8;matches=1644;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010266
Chr1	stalkie_big_nohaplotig	exon	112688445	112688862	100	-	.	Parent=FBgn0001565.1.mrna1;Target=FBgn0001565.1 1230 1647 +
Chr1	stalkie_big_nohaplotig	exon	112688924	112689316	99	-	.	Parent=FBgn0001565.1.mrna1;Target=FBgn0001565.1 837 1229 +
Chr1	stalkie_big_nohaplotig	exon	112689549	112689787	99	-	.	Parent=FBgn0001565.1.mrna1;Target=FBgn0001565.1 598 836 +
Chr1	stalkie_big_nohaplotig	exon	112689844	112690347	99	-	.	Parent=FBgn0001565.1.mrna1;Target=FBgn0001565.1 94 597 +
Chr1	stalkie_big_nohaplotig	exon	112690406	112690498	100	-	.	Parent=FBgn0001565.1.mrna1;Target=FBgn0001565.1 1 93 +
Chr1	stalkie_big_nohaplotig	CDS	112688445	112688862	.	-	1	Parent=FBgn0001565.1.mrna1;Target=FBgn0001565.1 1230 1647 +
Chr1	stalkie_big_nohaplotig	CDS	112688924	112689316	.	-	1	Parent=FBgn0001565.1.mrna1;Target=FBgn0001565.1 837 1229 +
Chr1	stalkie_big_nohaplotig	CDS	112689549	112689787	.	-	0	Parent=FBgn0001565.1.mrna1;Target=FBgn0001565.1 598 836 +
Chr1	stalkie_big_nohaplotig	CDS	112689844	112690347	.	-	0	Parent=FBgn0001565.1.mrna1;Target=FBgn0001565.1 94 597 +
Chr1	stalkie_big_nohaplotig	CDS	112690406	112690498	.	-	0	Parent=FBgn0001565.1.mrna1;Target=FBgn0001565.1 1 93 +
Chr1	gffcl	locus	112692006	112692599	.	+	.	ID=RLOC_00010267;geneIDs=FBgn0039930.1.path1;transcripts=FBgn0039930.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112692006	112692599	.	+	.	ID=FBgn0039930.1.mrna1;geneID=FBgn0039930.1.path1;Name=FBgn0039930.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=593;mismatches=1;indels=0;unknowns=0;Target=FBgn0039930.1 594 1 .;locus=RLOC_00010267
Chr1	stalkie_big_nohaplotig	exon	112692006	112692599	99	+	.	Parent=FBgn0039930.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112692006	112692599	.	+	0	Parent=FBgn0039930.1.mrna1
Chr1	gffcl	locus	112694204	112694736	.	-	.	ID=RLOC_00010268;geneIDs=comp140342_c0_seq1.path1;transcripts=comp140342_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112694204	112694736	.	-	.	ID=comp140342_c0_seq1.mrna1;geneID=comp140342_c0_seq1.path1;Name=comp140342_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=462;mismatches=1;indels=0;unknowns=0;Target=comp140342_c0_seq1 154 237 .;locus=RLOC_00010268
Chr1	stalkie_big_nohaplotig	exon	112694204	112694530	100	-	.	Parent=comp140342_c0_seq1.mrna1;Target=comp140342_c0_seq1 1 327 -
Chr1	stalkie_big_nohaplotig	exon	112694601	112694736	99	-	.	Parent=comp140342_c0_seq1.mrna1;Target=comp140342_c0_seq1 328 463 -
Chr1	stalkie_big_nohaplotig	CDS	112694357	112694440	.	-	0	Parent=comp140342_c0_seq1.mrna1
Chr1	gffcl	locus	112699298	112730800	.	.	.	ID=RLOC_00010269;geneIDs=FBgn0020272.path1,comp159053_c0_seq1.path1,comp160498_c0_seq1.path1;transcripts=FBgn0020272.mrna1,comp159053_c0_seq1.mrna1,FBgn0020272.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112699298	112702110	.	+	.	ID=FBgn0020272.mrna1;geneID=FBgn0020272.path1;Name=FBgn0020272;Dir=sensecoverage=100.0;identity=99.4;matches=528;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010269
Chr1	stalkie_big_nohaplotig	exon	112699298	112699402	98	+	.	Parent=FBgn0020272.mrna1;Target=FBgn0020272 1 105 +
Chr1	stalkie_big_nohaplotig	exon	112699455	112699538	100	+	.	Parent=FBgn0020272.mrna1;Target=FBgn0020272 106 189 +
Chr1	stalkie_big_nohaplotig	exon	112700521	112700862	99	+	.	Parent=FBgn0020272.mrna1;Target=FBgn0020272 190 531 +
Chr1	stalkie_big_nohaplotig	exon	112701040	112701142	100	+	.	Parent=FBgn0020272.mrna1;Target=FBgn0020272 1 103 +
Chr1	stalkie_big_nohaplotig	exon	112701203	112702110	98	+	.	Parent=FBgn0020272.mrna1;Target=FBgn0020272 104 1017 +
Chr1	stalkie_big_nohaplotig	CDS	112699298	112699402	.	+	0	Parent=FBgn0020272.mrna1;Target=FBgn0020272 1 105 +
Chr1	stalkie_big_nohaplotig	CDS	112699455	112699538	.	+	0	Parent=FBgn0020272.mrna1;Target=FBgn0020272 106 189 +
Chr1	stalkie_big_nohaplotig	CDS	112700521	112700862	.	+	0	Parent=FBgn0020272.mrna1;Target=FBgn0020272 190 531 +
Chr1	stalkie_big_nohaplotig	CDS	112701040	112701142	.	+	0	Parent=FBgn0020272.mrna1;Target=FBgn0020272 1 103 +
Chr1	stalkie_big_nohaplotig	CDS	112701203	112702110	.	+	2	Parent=FBgn0020272.mrna1;Target=FBgn0020272 104 1017 +
Chr1	stalkie_big_nohaplotig	mRNA	112701038	112730800	.	+	.	ID=comp159053_c0_seq1.mrna1;geneID=comp159053_c0_seq1.path1;Name=comp159053_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=1245;mismatches=7;indels=7;unknowns=0;locus=RLOC_00010269
Chr1	stalkie_big_nohaplotig	exon	112701038	112701142	100	+	.	Parent=comp159053_c0_seq1.mrna1;Target=comp159053_c0_seq1 1155 1259 -
Chr1	stalkie_big_nohaplotig	exon	112701203	112702126	98	+	.	Parent=comp159053_c0_seq1.mrna1;Target=comp159053_c0_seq1 224 1154 -
Chr1	stalkie_big_nohaplotig	exon	112730578	112730800	100	+	.	Parent=comp159053_c0_seq1.mrna1;Target=comp159053_c0_seq1 1 223 -
Chr1	stalkie_big_nohaplotig	CDS	112701040	112701142	.	+	0	Parent=comp159053_c0_seq1.mrna1;Target=comp159053_c0_seq1 1155 1257 .
Chr1	stalkie_big_nohaplotig	CDS	112701203	112701719	.	+	2	Parent=comp159053_c0_seq1.mrna1;Target=comp159053_c0_seq1 637 1154 .
Chr1	stalkie_big_nohaplotig	mRNA	112701040	112702110	.	+	.	ID=FBgn0020272.mrna1;geneID=FBgn0020272.path1;Name=FBgn0020272;Dir=sensecoverage=100.0;identity=98.7;matches=1004;mismatches=7;indels=6;unknowns=0;locus=RLOC_00010269
Chr1	stalkie_big_nohaplotig	exon	112701040	112702110	.	+	.	Parent=FBgn0020272.mrna1
Chr1	gffcl	locus	112702332	112702986	.	-	.	ID=RLOC_00010270;geneIDs=comp159508_c1_seq1.path1;transcripts=comp159508_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112702332	112702986	.	-	.	ID=comp159508_c1_seq1.mrna1;geneID=comp159508_c1_seq1.path1;Name=comp159508_c1_seq1;Dir=indeterminatecoverage=61.6;identity=95.8;matches=643;mismatches=12;indels=16;unknowns=0;Target=comp159508_c1_seq1 1090 420 .;CDS_Target=comp159508_c1_seq1 552 421 .;locus=RLOC_00010270
Chr1	stalkie_big_nohaplotig	exon	112702332	112702986	95	-	.	Parent=comp159508_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112702854	112702985	.	-	0	Parent=comp159508_c1_seq1.mrna1
Chr1	gffcl	locus	112705581	112804882	.	-	.	ID=RLOC_00010271;geneIDs=comp159541_c1_seq1.path1;transcripts=comp159541_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112705581	112804882	.	-	.	ID=comp159541_c1_seq1.mrna1;geneID=comp159541_c1_seq1.path1;Name=comp159541_c1_seq1;Dir=indeterminatecoverage=98.7;identity=97.6;matches=2582;mismatches=61;indels=3;unknowns=0;locus=RLOC_00010271
Chr1	stalkie_big_nohaplotig	exon	112705581	112708201	97	-	.	Parent=comp159541_c1_seq1.mrna1;Target=comp159541_c1_seq1 2679 56 .
Chr1	stalkie_big_nohaplotig	exon	112798479	112798482	100	-	.	Parent=comp159541_c1_seq1.mrna1;Target=comp159541_c1_seq1 55 52 .
Chr1	stalkie_big_nohaplotig	exon	112800229	112800239	100	-	.	Parent=comp159541_c1_seq1.mrna1;Target=comp159541_c1_seq1 51 41 .
Chr1	stalkie_big_nohaplotig	exon	112803884	112803888	100	-	.	Parent=comp159541_c1_seq1.mrna1;Target=comp159541_c1_seq1 40 36 .
Chr1	stalkie_big_nohaplotig	exon	112804881	112804882	100	-	.	Parent=comp159541_c1_seq1.mrna1;Target=comp159541_c1_seq1 35 34 .
Chr1	stalkie_big_nohaplotig	CDS	112707564	112708201	.	-	2	Parent=comp159541_c1_seq1.mrna1;Target=comp159541_c1_seq1 694 56 .
Chr1	stalkie_big_nohaplotig	CDS	112798479	112798482	.	-	0	Parent=comp159541_c1_seq1.mrna1;Target=comp159541_c1_seq1 55 52 .
Chr1	stalkie_big_nohaplotig	CDS	112800229	112800239	.	-	2	Parent=comp159541_c1_seq1.mrna1;Target=comp159541_c1_seq1 51 41 .
Chr1	stalkie_big_nohaplotig	CDS	112803884	112803888	.	-	1	Parent=comp159541_c1_seq1.mrna1;Target=comp159541_c1_seq1 40 36 .
Chr1	gffcl	locus	112716919	112725399	.	+	.	ID=RLOC_00010272;geneIDs=comp155952_c4_seq1.path1;transcripts=comp155952_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112716919	112725399	.	+	.	ID=comp155952_c4_seq1.mrna1;geneID=comp155952_c4_seq1.path1;Name=comp155952_c4_seq1;Dir=indeterminatecoverage=94.8;identity=99.2;matches=1841;mismatches=11;indels=4;unknowns=0;Target=comp155952_c4_seq1 538 266 .;locus=RLOC_00010272
Chr1	stalkie_big_nohaplotig	exon	112716919	112717134	96	+	.	Parent=comp155952_c4_seq1.mrna1;Target=comp155952_c4_seq1 216 1 .
Chr1	stalkie_big_nohaplotig	exon	112723395	112724467	99	+	.	Parent=comp155952_c4_seq1.mrna1;Target=comp155952_c4_seq1 1289 217 .
Chr1	stalkie_big_nohaplotig	exon	112724833	112725399	98	+	.	Parent=comp155952_c4_seq1.mrna1;Target=comp155952_c4_seq1 1852 1290 .
Chr1	stalkie_big_nohaplotig	CDS	112723444	112723716	.	+	0	Parent=comp155952_c4_seq1.mrna1
Chr1	gffcl	locus	112775326	112777783	.	-	.	ID=RLOC_00010274;geneIDs=comp163075_c0_seq1.path1;transcripts=comp163075_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112775326	112777783	.	-	.	ID=comp163075_c0_seq1.mrna1;geneID=comp163075_c0_seq1.path1;Name=comp163075_c0_seq1;Dir=sensecoverage=100.0;identity=98.9;matches=2324;mismatches=14;indels=12;unknowns=0;locus=RLOC_00010274
Chr1	stalkie_big_nohaplotig	exon	112775326	112777393	98	-	.	Parent=comp163075_c0_seq1.mrna1;Target=comp163075_c0_seq1 283 2338 +
Chr1	stalkie_big_nohaplotig	exon	112777502	112777783	99	-	.	Parent=comp163075_c0_seq1.mrna1;Target=comp163075_c0_seq1 1 282 +
Chr1	stalkie_big_nohaplotig	CDS	112775327	112777393	.	-	0	Parent=comp163075_c0_seq1.mrna1;Target=comp163075_c0_seq1 283 2337 +
Chr1	stalkie_big_nohaplotig	CDS	112777502	112777783	.	-	0	Parent=comp163075_c0_seq1.mrna1;Target=comp163075_c0_seq1 1 282 +
Chr1	gffcl	locus	112842853	112845014	.	+	.	ID=RLOC_00010275;geneIDs=comp143364_c0_seq1.path1;transcripts=comp143364_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112842853	112845014	.	+	.	ID=comp143364_c0_seq1.mrna1;geneID=comp143364_c0_seq1.path1;Name=comp143364_c0_seq1;Dir=indeterminatecoverage=99.4;identity=97.5;matches=311;mismatches=8;indels=0;unknowns=0;locus=RLOC_00010275
Chr1	stalkie_big_nohaplotig	exon	112842853	112843047	95	+	.	Parent=comp143364_c0_seq1.mrna1;Target=comp143364_c0_seq1 197 3 .
Chr1	stalkie_big_nohaplotig	exon	112844891	112845014	100	+	.	Parent=comp143364_c0_seq1.mrna1;Target=comp143364_c0_seq1 321 198 .
Chr1	stalkie_big_nohaplotig	CDS	112843046	112843047	.	+	0	Parent=comp143364_c0_seq1.mrna1;Target=comp143364_c0_seq1 197 196 .
Chr1	stalkie_big_nohaplotig	CDS	112844891	112845014	.	+	1	Parent=comp143364_c0_seq1.mrna1;Target=comp143364_c0_seq1 321 198 .
Chr1	gffcl	locus	112860008	112860927	.	-	.	ID=RLOC_00010276;geneIDs=FBgn0031436.1.path2,FBgn0031436.2.path2;transcripts=FBgn0031436.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	112860008	112860927	.	-	.	ID=FBgn0031436.1.mrna2;geneID=FBgn0031436.1.path2;Name=FBgn0031436.1;Dir=sensecoverage=100.0;identity=99.4;matches=465;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010276
Chr1	stalkie_big_nohaplotig	exon	112860008	112860078	100	-	.	Parent=FBgn0031436.1.mrna2;Target=FBgn0031436.1 398 468 +
Chr1	stalkie_big_nohaplotig	exon	112860393	112860477	100	-	.	Parent=FBgn0031436.1.mrna2;Target=FBgn0031436.1 313 397 +
Chr1	stalkie_big_nohaplotig	exon	112860544	112860721	98	-	.	Parent=FBgn0031436.1.mrna2;Target=FBgn0031436.1 135 312 +
Chr1	stalkie_big_nohaplotig	exon	112860794	112860927	100	-	.	Parent=FBgn0031436.1.mrna2;Target=FBgn0031436.1 1 134 +
Chr1	stalkie_big_nohaplotig	CDS	112860008	112860078	.	-	2	Parent=FBgn0031436.1.mrna2;Target=FBgn0031436.1 398 468 +
Chr1	stalkie_big_nohaplotig	CDS	112860393	112860477	.	-	0	Parent=FBgn0031436.1.mrna2;Target=FBgn0031436.1 313 397 +
Chr1	stalkie_big_nohaplotig	CDS	112860544	112860721	.	-	1	Parent=FBgn0031436.1.mrna2;Target=FBgn0031436.1 135 312 +
Chr1	stalkie_big_nohaplotig	CDS	112860794	112860927	.	-	0	Parent=FBgn0031436.1.mrna2;Target=FBgn0031436.1 1 134 +
Chr1	gffcl	locus	112877575	112878222	.	+	.	ID=RLOC_00010277;geneIDs=comp101715_c0_seq1.path1;transcripts=comp101715_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112877575	112878222	.	+	.	ID=comp101715_c0_seq1.mrna1;geneID=comp101715_c0_seq1.path1;Name=comp101715_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.1;matches=637;mismatches=11;indels=44;unknowns=0;Target=comp101715_c0_seq1 692 1 .;CDS_Target=comp101715_c0_seq1 505 410 .;locus=RLOC_00010277
Chr1	stalkie_big_nohaplotig	exon	112877575	112878222	92	+	.	Parent=comp101715_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112877940	112878035	.	+	0	Parent=comp101715_c0_seq1.mrna1
Chr1	gffcl	locus	112913014	112913766	.	-	.	ID=RLOC_00010278;geneIDs=comp149253_c0_seq1.path1;transcripts=comp149253_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112913014	112913766	.	-	.	ID=comp149253_c0_seq1.mrna1;geneID=comp149253_c0_seq1.path1;Name=comp149253_c0_seq1;Dir=antisensecoverage=99.9;identity=100.0;matches=703;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010278
Chr1	stalkie_big_nohaplotig	exon	112913014	112913282	100	-	.	Parent=comp149253_c0_seq1.mrna1;Target=comp149253_c0_seq1 2 270 -
Chr1	stalkie_big_nohaplotig	exon	112913333	112913766	100	-	.	Parent=comp149253_c0_seq1.mrna1;Target=comp149253_c0_seq1 271 704 -
Chr1	stalkie_big_nohaplotig	CDS	112913275	112913282	.	-	2	Parent=comp149253_c0_seq1.mrna1;Target=comp149253_c0_seq1 263 270 .
Chr1	stalkie_big_nohaplotig	CDS	112913333	112913711	.	-	0	Parent=comp149253_c0_seq1.mrna1;Target=comp149253_c0_seq1 271 649 .
Chr1	gffcl	locus	112918677	114553738	.	+	.	ID=RLOC_00010279;geneIDs=comp160664_c0_seq1.path1;transcripts=comp160664_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112918677	114553738	.	+	.	ID=comp160664_c0_seq1.mrna1;geneID=comp160664_c0_seq1.path1;Name=comp160664_c0_seq1;Dir=indeterminatecoverage=52.2;identity=95.6;matches=681;mismatches=19;indels=12;unknowns=0;locus=RLOC_00010279
Chr1	stalkie_big_nohaplotig	exon	112918677	112919245	100	+	.	Parent=comp160664_c0_seq1.mrna1;Target=comp160664_c0_seq1 569 1 .
Chr1	stalkie_big_nohaplotig	exon	114497096	114497101	100	+	.	Parent=comp160664_c0_seq1.mrna1;Target=comp160664_c0_seq1 575 570 .
Chr1	stalkie_big_nohaplotig	exon	114497476	114497516	49	+	.	Parent=comp160664_c0_seq1.mrna1;Target=comp160664_c0_seq1 628 576 .
Chr1	stalkie_big_nohaplotig	exon	114499655	114499662	100	+	.	Parent=comp160664_c0_seq1.mrna1;Target=comp160664_c0_seq1 636 629 .
Chr1	stalkie_big_nohaplotig	exon	114499668	114499673	100	+	.	Parent=comp160664_c0_seq1.mrna1;Target=comp160664_c0_seq1 677 672 .
Chr1	stalkie_big_nohaplotig	exon	114502546	114502547	100	+	.	Parent=comp160664_c0_seq1.mrna1;Target=comp160664_c0_seq1 679 678 .
Chr1	stalkie_big_nohaplotig	exon	114503707	114503713	100	+	.	Parent=comp160664_c0_seq1.mrna1;Target=comp160664_c0_seq1 686 680 .
Chr1	stalkie_big_nohaplotig	exon	114511137	114511144	100	+	.	Parent=comp160664_c0_seq1.mrna1;Target=comp160664_c0_seq1 694 687 .
Chr1	stalkie_big_nohaplotig	exon	114519316	114519324	100	+	.	Parent=comp160664_c0_seq1.mrna1;Target=comp160664_c0_seq1 703 695 .
Chr1	stalkie_big_nohaplotig	exon	114532325	114532340	81	+	.	Parent=comp160664_c0_seq1.mrna1;Target=comp160664_c0_seq1 719 704 .
Chr1	stalkie_big_nohaplotig	exon	114537036	114537040	80	+	.	Parent=comp160664_c0_seq1.mrna1;Target=comp160664_c0_seq1 724 720 .
Chr1	stalkie_big_nohaplotig	exon	114543856	114543860	100	+	.	Parent=comp160664_c0_seq1.mrna1;Target=comp160664_c0_seq1 729 725 .
Chr1	stalkie_big_nohaplotig	exon	114549978	114549981	100	+	.	Parent=comp160664_c0_seq1.mrna1;Target=comp160664_c0_seq1 733 730 .
Chr1	stalkie_big_nohaplotig	exon	114550640	114550645	100	+	.	Parent=comp160664_c0_seq1.mrna1;Target=comp160664_c0_seq1 739 734 .
Chr1	stalkie_big_nohaplotig	exon	114553731	114553738	100	+	.	Parent=comp160664_c0_seq1.mrna1;Target=comp160664_c0_seq1 747 740 .
Chr1	stalkie_big_nohaplotig	CDS	112919244	112919245	.	+	0	Parent=comp160664_c0_seq1.mrna1;Target=comp160664_c0_seq1 569 568 .
Chr1	stalkie_big_nohaplotig	CDS	114497096	114497101	.	+	1	Parent=comp160664_c0_seq1.mrna1;Target=comp160664_c0_seq1 575 570 .
Chr1	stalkie_big_nohaplotig	CDS	114497476	114497516	.	+	1	Parent=comp160664_c0_seq1.mrna1;Target=comp160664_c0_seq1 628 576 .
Chr1	stalkie_big_nohaplotig	CDS	114499655	114499662	.	+	2	Parent=comp160664_c0_seq1.mrna1;Target=comp160664_c0_seq1 636 629 .
Chr1	gffcl	locus	112948422	112949453	.	-	.	ID=RLOC_00010280;geneIDs=FBgn0000273.1.path1;transcripts=FBgn0000273.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112948422	112949453	.	-	.	ID=FBgn0000273.1.mrna1;geneID=FBgn0000273.1.path1;Name=FBgn0000273.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1031;mismatches=1;indels=0;unknowns=0;Target=FBgn0000273.1 1032 1 .;locus=RLOC_00010280
Chr1	stalkie_big_nohaplotig	exon	112948422	112949453	99	-	.	Parent=FBgn0000273.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112948422	112949453	.	-	0	Parent=FBgn0000273.1.mrna1
Chr1	gffcl	locus	112968163	112969800	.	-	.	ID=RLOC_00010281;geneIDs=ORF489.path1;transcripts=ORF489.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112968163	112969800	.	-	.	ID=ORF489.mrna1;geneID=ORF489.path1;Name=ORF489;Dir=indeterminatecoverage=94.3;identity=98.7;matches=1616;mismatches=22;indels=0;unknowns=0;Target=ORF489 1638 1 .;locus=RLOC_00010281
Chr1	stalkie_big_nohaplotig	exon	112968163	112969800	98	-	.	Parent=ORF489.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112968163	112969800	.	-	0	Parent=ORF489.mrna1
Chr1	gffcl	locus	112969807	112973679	.	-	.	ID=RLOC_00010282;geneIDs=ORF58.path1;transcripts=ORF58.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112969807	112973679	.	-	.	ID=ORF58.mrna1;geneID=ORF58.path1;Name=ORF58;Dir=sensecoverage=100.0;identity=99.1;matches=3304;mismatches=5;indels=24;unknowns=0;locus=RLOC_00010282
Chr1	stalkie_big_nohaplotig	exon	112969807	112971162	100	-	.	Parent=ORF58.mrna1;Target=ORF58 1978 3333 +
Chr1	stalkie_big_nohaplotig	exon	112971541	112972802	98	-	.	Parent=ORF58.mrna1;Target=ORF58 692 1977 +
Chr1	stalkie_big_nohaplotig	exon	112972989	112973679	99	-	.	Parent=ORF58.mrna1;Target=ORF58 1 691 +
Chr1	stalkie_big_nohaplotig	CDS	112969807	112971162	.	-	0	Parent=ORF58.mrna1;Target=ORF58 1978 3333 +
Chr1	stalkie_big_nohaplotig	CDS	112971541	112972802	.	-	2	Parent=ORF58.mrna1;Target=ORF58 692 1977 +
Chr1	stalkie_big_nohaplotig	CDS	112972989	112973679	.	-	0	Parent=ORF58.mrna1;Target=ORF58 1 691 +
Chr1	gffcl	locus	112974686	112977415	.	-	.	ID=RLOC_00010283;geneIDs=ORF155.path1;transcripts=ORF155.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112974686	112977415	.	-	.	ID=ORF155.mrna1;geneID=ORF155.path1;Name=ORF155;Dir=indeterminatecoverage=100.0;identity=99.5;matches=2715;mismatches=15;indels=0;unknowns=0;Target=ORF155 2730 1 .;locus=RLOC_00010283
Chr1	stalkie_big_nohaplotig	exon	112974686	112977415	99	-	.	Parent=ORF155.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112974686	112977415	.	-	0	Parent=ORF155.mrna1
Chr1	gffcl	locus	112979321	112979602	.	-	.	ID=RLOC_00010284;geneIDs=comp131141_c0_seq1.path1;transcripts=comp131141_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112979321	112979602	.	-	.	ID=comp131141_c0_seq1.mrna1;geneID=comp131141_c0_seq1.path1;Name=comp131141_c0_seq1;Dir=indeterminatecoverage=94.0;identity=93.3;matches=264;mismatches=18;indels=1;unknowns=0;Target=comp131141_c0_seq1 299 17 .;CDS_Target=comp131141_c0_seq1 145 71 .;locus=RLOC_00010284
Chr1	stalkie_big_nohaplotig	exon	112979321	112979602	93	-	.	Parent=comp131141_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112979474	112979548	.	-	0	Parent=comp131141_c0_seq1.mrna1
Chr1	gffcl	locus	112985564	112986787	.	+	.	ID=RLOC_00010285;geneIDs=comp157596_c0_seq1.path1;transcripts=comp157596_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112985564	112986787	.	+	.	ID=comp157596_c0_seq1.mrna1;geneID=comp157596_c0_seq1.path1;Name=comp157596_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1223;mismatches=1;indels=1;unknowns=0;Target=comp157596_c0_seq1 1225 1 .;CDS_Target=comp157596_c0_seq1 288 91 .;locus=RLOC_00010285
Chr1	stalkie_big_nohaplotig	exon	112985564	112986787	99	+	.	Parent=comp157596_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112985654	112985851	.	+	0	Parent=comp157596_c0_seq1.mrna1
Chr1	gffcl	locus	112989087	112990127	.	-	.	ID=RLOC_00010286;geneIDs=comp144374_c0_seq1.path1;transcripts=comp144374_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	112989087	112990127	.	-	.	ID=comp144374_c0_seq1.mrna1;geneID=comp144374_c0_seq1.path1;Name=comp144374_c0_seq1;Dir=indeterminatecoverage=98.4;identity=100.0;matches=1041;mismatches=0;indels=0;unknowns=0;Target=comp144374_c0_seq1 1041 1 .;CDS_Target=comp144374_c0_seq1 885 217 .;locus=RLOC_00010286
Chr1	stalkie_big_nohaplotig	exon	112989087	112990127	100	-	.	Parent=comp144374_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	112989243	112989911	.	-	0	Parent=comp144374_c0_seq1.mrna1
Chr1	gffcl	locus	113006032	113006639	.	-	.	ID=RLOC_00010287;geneIDs=comp149423_c0_seq1.path1;transcripts=comp149423_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113006032	113006639	.	-	.	ID=comp149423_c0_seq1.mrna1;geneID=comp149423_c0_seq1.path1;Name=comp149423_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=600;mismatches=8;indels=0;unknowns=0;Target=comp149423_c0_seq1 608 1 .;CDS_Target=comp149423_c0_seq1 536 459 .;locus=RLOC_00010287
Chr1	stalkie_big_nohaplotig	exon	113006032	113006639	98	-	.	Parent=comp149423_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	113006104	113006181	.	-	0	Parent=comp149423_c0_seq1.mrna1
Chr1	gffcl	locus	113006995	113007349	.	-	.	ID=RLOC_00010288;geneIDs=comp137240_c0_seq1.path1;transcripts=comp137240_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113006995	113007349	.	-	.	ID=comp137240_c0_seq1.mrna1;geneID=comp137240_c0_seq1.path1;Name=comp137240_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=354;mismatches=1;indels=0;unknowns=0;Target=comp137240_c0_seq1 355 1 .;CDS_Target=comp137240_c0_seq1 253 152 .;locus=RLOC_00010288
Chr1	stalkie_big_nohaplotig	exon	113006995	113007349	99	-	.	Parent=comp137240_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	113007097	113007198	.	-	0	Parent=comp137240_c0_seq1.mrna1
Chr1	gffcl	locus	113009054	113016707	.	-	.	ID=RLOC_00010289;geneIDs=FBgn0025391.1.path1;transcripts=FBgn0025391.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113009054	113016707	.	-	.	ID=FBgn0025391.1.mrna1;geneID=FBgn0025391.1.path1;Name=FBgn0025391.1;Dir=sensecoverage=100.0;identity=99.5;matches=1472;mismatches=7;indels=0;unknowns=0;locus=RLOC_00010289
Chr1	stalkie_big_nohaplotig	exon	113009054	113009239	99	-	.	Parent=FBgn0025391.1.mrna1;Target=FBgn0025391.1 1294 1479 +
Chr1	stalkie_big_nohaplotig	exon	113009453	113009576	100	-	.	Parent=FBgn0025391.1.mrna1;Target=FBgn0025391.1 1170 1293 +
Chr1	stalkie_big_nohaplotig	exon	113010893	113011154	100	-	.	Parent=FBgn0025391.1.mrna1;Target=FBgn0025391.1 908 1169 +
Chr1	stalkie_big_nohaplotig	exon	113014221	113014341	100	-	.	Parent=FBgn0025391.1.mrna1;Target=FBgn0025391.1 787 907 +
Chr1	stalkie_big_nohaplotig	exon	113014449	113015213	99	-	.	Parent=FBgn0025391.1.mrna1;Target=FBgn0025391.1 22 786 +
Chr1	stalkie_big_nohaplotig	exon	113016687	113016707	100	-	.	Parent=FBgn0025391.1.mrna1;Target=FBgn0025391.1 1 21 +
Chr1	stalkie_big_nohaplotig	CDS	113009054	113009239	.	-	0	Parent=FBgn0025391.1.mrna1;Target=FBgn0025391.1 1294 1479 +
Chr1	stalkie_big_nohaplotig	CDS	113009453	113009576	.	-	1	Parent=FBgn0025391.1.mrna1;Target=FBgn0025391.1 1170 1293 +
Chr1	stalkie_big_nohaplotig	CDS	113010893	113011154	.	-	2	Parent=FBgn0025391.1.mrna1;Target=FBgn0025391.1 908 1169 +
Chr1	stalkie_big_nohaplotig	CDS	113014221	113014341	.	-	0	Parent=FBgn0025391.1.mrna1;Target=FBgn0025391.1 787 907 +
Chr1	stalkie_big_nohaplotig	CDS	113014449	113015213	.	-	0	Parent=FBgn0025391.1.mrna1;Target=FBgn0025391.1 22 786 +
Chr1	stalkie_big_nohaplotig	CDS	113016687	113016707	.	-	0	Parent=FBgn0025391.1.mrna1;Target=FBgn0025391.1 1 21 +
Chr1	gffcl	locus	113020397	113021028	.	+	.	ID=RLOC_00010290;geneIDs=comp118887_c0_seq1.path1;transcripts=comp118887_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113020397	113021028	.	+	.	ID=comp118887_c0_seq1.mrna1;geneID=comp118887_c0_seq1.path1;Name=comp118887_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=629;mismatches=3;indels=0;unknowns=0;Target=comp118887_c0_seq1 632 1 .;CDS_Target=comp118887_c0_seq1 311 153 .;locus=RLOC_00010290
Chr1	stalkie_big_nohaplotig	exon	113020397	113021028	99	+	.	Parent=comp118887_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	113020549	113020707	.	+	0	Parent=comp118887_c0_seq1.mrna1
Chr1	gffcl	locus	113031022	113032175	.	-	.	ID=RLOC_00010291;geneIDs=comp159389_c4_seq1.path3;transcripts=comp159389_c4_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	113031022	113032175	.	-	.	ID=comp159389_c4_seq1.mrna3;geneID=comp159389_c4_seq1.path3;Name=comp159389_c4_seq1;Dir=indeterminatecoverage=54.3;identity=86.9;matches=1009;mismatches=75;indels=77;unknowns=0;Target=comp159389_c4_seq1 1091 1 .;CDS_Target=comp159389_c4_seq1 155 3 .;locus=RLOC_00010291
Chr1	stalkie_big_nohaplotig	exon	113031022	113032175	86	-	.	Parent=comp159389_c4_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	113032021	113032173	.	-	0	Parent=comp159389_c4_seq1.mrna3
Chr1	gffcl	locus	113041470	113073709	.	.	.	ID=RLOC_00010292;geneIDs=FBgn0259245.1.path2,comp163475_c0_seq1.path1;transcripts=FBgn0259245.1.mrna2,comp163475_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113041470	113073709	.	+	.	ID=FBgn0259245.1.mrna2;geneID=FBgn0259245.1.path2;Name=FBgn0259245.1;Dir=sensecoverage=79.3;identity=99.7;matches=910;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010292
Chr1	stalkie_big_nohaplotig	exon	113041470	113041473	25	+	.	Parent=FBgn0259245.1.mrna2;Target=FBgn0259245.1 240 243 +
Chr1	stalkie_big_nohaplotig	exon	113044149	113044150	100	+	.	Parent=FBgn0259245.1.mrna2;Target=FBgn0259245.1 244 245 +
Chr1	stalkie_big_nohaplotig	exon	113047499	113047505	100	+	.	Parent=FBgn0259245.1.mrna2;Target=FBgn0259245.1 246 252 +
Chr1	stalkie_big_nohaplotig	exon	113052688	113052690	100	+	.	Parent=FBgn0259245.1.mrna2;Target=FBgn0259245.1 253 255 +
Chr1	stalkie_big_nohaplotig	exon	113057594	113057786	100	+	.	Parent=FBgn0259245.1.mrna2;Target=FBgn0259245.1 256 448 +
Chr1	stalkie_big_nohaplotig	exon	113058045	113058173	100	+	.	Parent=FBgn0259245.1.mrna2;Target=FBgn0259245.1 449 577 +
Chr1	stalkie_big_nohaplotig	exon	113068489	113068608	100	+	.	Parent=FBgn0259245.1.mrna2;Target=FBgn0259245.1 578 697 +
Chr1	stalkie_big_nohaplotig	exon	113069012	113069182	100	+	.	Parent=FBgn0259245.1.mrna2;Target=FBgn0259245.1 698 868 +
Chr1	stalkie_big_nohaplotig	exon	113069311	113069366	100	+	.	Parent=FBgn0259245.1.mrna2;Target=FBgn0259245.1 869 924 +
Chr1	stalkie_big_nohaplotig	exon	113073482	113073709	100	+	.	Parent=FBgn0259245.1.mrna2;Target=FBgn0259245.1 925 1152 +
Chr1	stalkie_big_nohaplotig	CDS	113044149	113044150	.	+	0	Parent=FBgn0259245.1.mrna2;Target=FBgn0259245.1 244 245 +
Chr1	stalkie_big_nohaplotig	CDS	113047499	113047505	.	+	1	Parent=FBgn0259245.1.mrna2;Target=FBgn0259245.1 246 252 +
Chr1	stalkie_big_nohaplotig	CDS	113052688	113052690	.	+	0	Parent=FBgn0259245.1.mrna2;Target=FBgn0259245.1 253 255 +
Chr1	stalkie_big_nohaplotig	CDS	113057594	113057786	.	+	0	Parent=FBgn0259245.1.mrna2;Target=FBgn0259245.1 256 448 +
Chr1	stalkie_big_nohaplotig	CDS	113058045	113058173	.	+	2	Parent=FBgn0259245.1.mrna2;Target=FBgn0259245.1 449 577 +
Chr1	stalkie_big_nohaplotig	CDS	113068489	113068608	.	+	2	Parent=FBgn0259245.1.mrna2;Target=FBgn0259245.1 578 697 +
Chr1	stalkie_big_nohaplotig	CDS	113069012	113069182	.	+	2	Parent=FBgn0259245.1.mrna2;Target=FBgn0259245.1 698 868 +
Chr1	stalkie_big_nohaplotig	CDS	113069311	113069366	.	+	2	Parent=FBgn0259245.1.mrna2;Target=FBgn0259245.1 869 924 +
Chr1	stalkie_big_nohaplotig	CDS	113073482	113073709	.	+	0	Parent=FBgn0259245.1.mrna2;Target=FBgn0259245.1 925 1152 +
Chr1	stalkie_big_nohaplotig	mRNA	113046471	113047741	.	-	.	ID=comp163475_c0_seq1.mrna1;geneID=comp163475_c0_seq1.path1;Name=comp163475_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.7;matches=1254;mismatches=16;indels=1;unknowns=0;Target=comp163475_c0_seq1 1271 2 .;CDS_Target=comp163475_c0_seq1 330 109 .;locus=RLOC_00010292
Chr1	stalkie_big_nohaplotig	exon	113046471	113047741	98	-	.	Parent=comp163475_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	113047413	113047634	.	-	0	Parent=comp163475_c0_seq1.mrna1
Chr1	gffcl	locus	113042899	113045203	.	-	.	ID=RLOC_00010293;geneIDs=comp162758_c0_seq1.path1;transcripts=comp162758_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113042899	113045203	.	-	.	ID=comp162758_c0_seq1.mrna1;geneID=comp162758_c0_seq1.path1;Name=comp162758_c0_seq1;Dir=antisensecoverage=100.0;identity=94.3;matches=1498;mismatches=41;indels=50;unknowns=0;Target=comp162758_c0_seq1 1006 1017 .;locus=RLOC_00010293
Chr1	stalkie_big_nohaplotig	exon	113042899	113043097	98	-	.	Parent=comp162758_c0_seq1.mrna1;Target=comp162758_c0_seq1 1 199 -
Chr1	stalkie_big_nohaplotig	exon	113043154	113044439	94	-	.	Parent=comp162758_c0_seq1.mrna1;Target=comp162758_c0_seq1 200 1437 -
Chr1	stalkie_big_nohaplotig	exon	113045023	113045070	77	-	.	Parent=comp162758_c0_seq1.mrna1;Target=comp162758_c0_seq1 1438 1485 -
Chr1	stalkie_big_nohaplotig	exon	113045149	113045203	96	-	.	Parent=comp162758_c0_seq1.mrna1;Target=comp162758_c0_seq1 1486 1540 -
Chr1	stalkie_big_nohaplotig	CDS	113044009	113044020	.	-	0	Parent=comp162758_c0_seq1.mrna1
Chr1	gffcl	locus	113045302	113415406	.	+	.	ID=RLOC_00010294;geneIDs=comp162004_c2_seq1.path1;transcripts=comp162004_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113045302	113415406	.	+	.	ID=comp162004_c2_seq1.mrna1;geneID=comp162004_c2_seq1.path1;Name=comp162004_c2_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=1883;mismatches=27;indels=5;unknowns=0;Target=comp162004_c2_seq1 173 90 .;locus=RLOC_00010294
Chr1	stalkie_big_nohaplotig	exon	113045302	113045495	88	+	.	Parent=comp162004_c2_seq1.mrna1;Target=comp162004_c2_seq1 195 1 .
Chr1	stalkie_big_nohaplotig	exon	113045579	113045597	100	+	.	Parent=comp162004_c2_seq1.mrna1;Target=comp162004_c2_seq1 255 237 .
Chr1	stalkie_big_nohaplotig	exon	113045695	113045709	93	+	.	Parent=comp162004_c2_seq1.mrna1;Target=comp162004_c2_seq1 270 256 .
Chr1	stalkie_big_nohaplotig	exon	113413708	113414160	99	+	.	Parent=comp162004_c2_seq1.mrna1;Target=comp162004_c2_seq1 723 271 .
Chr1	stalkie_big_nohaplotig	exon	113414178	113415406	99	+	.	Parent=comp162004_c2_seq1.mrna1;Target=comp162004_c2_seq1 2077 845 .
Chr1	stalkie_big_nohaplotig	CDS	113045391	113045473	.	+	0	Parent=comp162004_c2_seq1.mrna1
Chr1	gffcl	locus	113074256	113074574	.	-	.	ID=RLOC_00010295;geneIDs=comp140421_c0_seq1.path1;transcripts=comp140421_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113074256	113074574	.	-	.	ID=comp140421_c0_seq1.mrna1;geneID=comp140421_c0_seq1.path1;Name=comp140421_c0_seq1;Dir=indeterminatecoverage=96.1;identity=99.7;matches=318;mismatches=1;indels=0;unknowns=0;Target=comp140421_c0_seq1 319 1 .;CDS_Target=comp140421_c0_seq1 319 212 .;locus=RLOC_00010295
Chr1	stalkie_big_nohaplotig	exon	113074256	113074574	99	-	.	Parent=comp140421_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	113074256	113074363	.	-	0	Parent=comp140421_c0_seq1.mrna1
Chr1	gffcl	locus	113074982	113075426	.	-	.	ID=RLOC_00010296;geneIDs=comp153128_c0_seq1.path1;transcripts=comp153128_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113074982	113075426	.	-	.	ID=comp153128_c0_seq1.mrna1;geneID=comp153128_c0_seq1.path1;Name=comp153128_c0_seq1;Dir=indeterminatecoverage=62.6;identity=99.8;matches=444;mismatches=0;indels=1;unknowns=0;Target=comp153128_c0_seq1 444 1 .;CDS_Target=comp153128_c0_seq1 108 1 .;locus=RLOC_00010296
Chr1	stalkie_big_nohaplotig	exon	113074982	113075426	99	-	.	Parent=comp153128_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	113075318	113075426	.	-	0	Parent=comp153128_c0_seq1.mrna1
Chr1	gffcl	locus	113168119	113168584	.	-	.	ID=RLOC_00010297;geneIDs=comp143372_c0_seq1.path1;transcripts=comp143372_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113168119	113168584	.	-	.	ID=comp143372_c0_seq1.mrna1;geneID=comp143372_c0_seq1.path1;Name=comp143372_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=466;mismatches=0;indels=0;unknowns=0;Target=comp143372_c0_seq1 466 1 .;CDS_Target=comp143372_c0_seq1 82 2 .;locus=RLOC_00010297
Chr1	stalkie_big_nohaplotig	exon	113168119	113168584	100	-	.	Parent=comp143372_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	113168503	113168583	.	-	0	Parent=comp143372_c0_seq1.mrna1
Chr1	gffcl	locus	113174098	113191541	.	+	.	ID=RLOC_00010298;geneIDs=FBgn0004657.1.path1;transcripts=FBgn0004657.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113174098	113191541	.	+	.	ID=FBgn0004657.1.mrna1;geneID=FBgn0004657.1.path1;Name=FBgn0004657.1;Dir=sensecoverage=100.0;identity=99.8;matches=2631;mismatches=5;indels=0;unknowns=1;locus=RLOC_00010298
Chr1	stalkie_big_nohaplotig	exon	113174098	113174149	98	+	.	Parent=FBgn0004657.1.mrna1;Target=FBgn0004657.1 1 52 +
Chr1	stalkie_big_nohaplotig	exon	113179927	113180475	99	+	.	Parent=FBgn0004657.1.mrna1;Target=FBgn0004657.1 53 601 +
Chr1	stalkie_big_nohaplotig	exon	113180539	113180767	99	+	.	Parent=FBgn0004657.1.mrna1;Target=FBgn0004657.1 602 830 +
Chr1	stalkie_big_nohaplotig	exon	113187364	113187448	100	+	.	Parent=FBgn0004657.1.mrna1;Target=FBgn0004657.1 831 915 +
Chr1	stalkie_big_nohaplotig	exon	113189330	113189500	100	+	.	Parent=FBgn0004657.1.mrna1;Target=FBgn0004657.1 916 1086 +
Chr1	stalkie_big_nohaplotig	exon	113189574	113189837	100	+	.	Parent=FBgn0004657.1.mrna1;Target=FBgn0004657.1 1087 1350 +
Chr1	stalkie_big_nohaplotig	exon	113189909	113190657	99	+	.	Parent=FBgn0004657.1.mrna1;Target=FBgn0004657.1 1351 2099 +
Chr1	stalkie_big_nohaplotig	exon	113190762	113191236	99	+	.	Parent=FBgn0004657.1.mrna1;Target=FBgn0004657.1 2100 2574 +
Chr1	stalkie_big_nohaplotig	exon	113191479	113191541	100	+	.	Parent=FBgn0004657.1.mrna1;Target=FBgn0004657.1 2575 2637 +
Chr1	stalkie_big_nohaplotig	CDS	113174098	113174149	.	+	0	Parent=FBgn0004657.1.mrna1;Target=FBgn0004657.1 1 52 +
Chr1	stalkie_big_nohaplotig	CDS	113179927	113180475	.	+	2	Parent=FBgn0004657.1.mrna1;Target=FBgn0004657.1 53 601 +
Chr1	stalkie_big_nohaplotig	CDS	113180539	113180767	.	+	2	Parent=FBgn0004657.1.mrna1;Target=FBgn0004657.1 602 830 +
Chr1	stalkie_big_nohaplotig	CDS	113187364	113187448	.	+	1	Parent=FBgn0004657.1.mrna1;Target=FBgn0004657.1 831 915 +
Chr1	stalkie_big_nohaplotig	CDS	113189330	113189500	.	+	0	Parent=FBgn0004657.1.mrna1;Target=FBgn0004657.1 916 1086 +
Chr1	stalkie_big_nohaplotig	CDS	113189574	113189837	.	+	0	Parent=FBgn0004657.1.mrna1;Target=FBgn0004657.1 1087 1350 +
Chr1	stalkie_big_nohaplotig	CDS	113189909	113190657	.	+	0	Parent=FBgn0004657.1.mrna1;Target=FBgn0004657.1 1351 2099 +
Chr1	stalkie_big_nohaplotig	CDS	113190762	113191236	.	+	1	Parent=FBgn0004657.1.mrna1;Target=FBgn0004657.1 2100 2574 +
Chr1	stalkie_big_nohaplotig	CDS	113191479	113191541	.	+	0	Parent=FBgn0004657.1.mrna1;Target=FBgn0004657.1 2575 2637 +
Chr1	gffcl	locus	113188088	113189158	.	-	.	ID=RLOC_00010299;geneIDs=comp159271_c0_seq1.path1;transcripts=comp159271_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113188088	113189158	.	-	.	ID=comp159271_c0_seq1.mrna1;geneID=comp159271_c0_seq1.path1;Name=comp159271_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=1056;mismatches=12;indels=17;unknowns=0;Target=comp159271_c0_seq1 1082 1 .;CDS_Target=comp159271_c0_seq1 352 230 .;locus=RLOC_00010299
Chr1	stalkie_big_nohaplotig	exon	113188088	113189158	97	-	.	Parent=comp159271_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	113188817	113188939	.	-	0	Parent=comp159271_c0_seq1.mrna1
Chr1	gffcl	locus	113190083	113193137	.	-	.	ID=RLOC_00010300;geneIDs=comp163891_c1_seq1.path1;transcripts=comp163891_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113190083	113193137	.	-	.	ID=comp163891_c1_seq1.mrna1;geneID=comp163891_c1_seq1.path1;Name=comp163891_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=2564;mismatches=4;indels=25;unknowns=0;Target=comp163891_c1_seq1 2453 2067 .;locus=RLOC_00010300
Chr1	stalkie_big_nohaplotig	exon	113190083	113190657	100	-	.	Parent=comp163891_c1_seq1.mrna1;Target=comp163891_c1_seq1 2577 2003 .
Chr1	stalkie_big_nohaplotig	exon	113190762	113191236	99	-	.	Parent=comp163891_c1_seq1.mrna1;Target=comp163891_c1_seq1 2002 1528 .
Chr1	stalkie_big_nohaplotig	exon	113191479	113192899	98	-	.	Parent=comp163891_c1_seq1.mrna1;Target=comp163891_c1_seq1 1527 114 .
Chr1	stalkie_big_nohaplotig	exon	113193025	113193137	100	-	.	Parent=comp163891_c1_seq1.mrna1;Target=comp163891_c1_seq1 113 1 .
Chr1	stalkie_big_nohaplotig	CDS	113190207	113190593	.	-	0	Parent=comp163891_c1_seq1.mrna1
Chr1	gffcl	locus	113205156	113208086	.	+	.	ID=RLOC_00010301;geneIDs=FBgn0052819.1.path1;transcripts=FBgn0052819.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113205156	113208086	.	+	.	ID=FBgn0052819.1.mrna1;geneID=FBgn0052819.1.path1;Name=FBgn0052819.1;Dir=sensecoverage=100.0;identity=99.8;matches=1261;mismatches=1;indels=1;unknowns=0;locus=RLOC_00010301
Chr1	stalkie_big_nohaplotig	exon	113205156	113205326	100	+	.	Parent=FBgn0052819.1.mrna1;Target=FBgn0052819.1 1 171 +
Chr1	stalkie_big_nohaplotig	exon	113205394	113205662	100	+	.	Parent=FBgn0052819.1.mrna1;Target=FBgn0052819.1 172 440 +
Chr1	stalkie_big_nohaplotig	exon	113205734	113206109	100	+	.	Parent=FBgn0052819.1.mrna1;Target=FBgn0052819.1 441 816 +
Chr1	stalkie_big_nohaplotig	exon	113207526	113207737	99	+	.	Parent=FBgn0052819.1.mrna1;Target=FBgn0052819.1 817 1028 +
Chr1	stalkie_big_nohaplotig	exon	113207853	113208086	99	+	.	Parent=FBgn0052819.1.mrna1;Target=FBgn0052819.1 1029 1263 +
Chr1	stalkie_big_nohaplotig	CDS	113205156	113205326	.	+	0	Parent=FBgn0052819.1.mrna1;Target=FBgn0052819.1 1 171 +
Chr1	stalkie_big_nohaplotig	CDS	113205394	113205662	.	+	0	Parent=FBgn0052819.1.mrna1;Target=FBgn0052819.1 172 440 +
Chr1	stalkie_big_nohaplotig	CDS	113205734	113206109	.	+	1	Parent=FBgn0052819.1.mrna1;Target=FBgn0052819.1 441 816 +
Chr1	stalkie_big_nohaplotig	CDS	113207526	113207737	.	+	0	Parent=FBgn0052819.1.mrna1;Target=FBgn0052819.1 817 1028 +
Chr1	stalkie_big_nohaplotig	CDS	113207853	113208086	.	+	1	Parent=FBgn0052819.1.mrna1;Target=FBgn0052819.1 1029 1263 +
Chr1	gffcl	locus	113210446	113215935	.	+	.	ID=RLOC_00010302;geneIDs=FBgn0027588.1.path1;transcripts=FBgn0027588.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113210446	113215935	.	+	.	ID=FBgn0027588.1.mrna1;geneID=FBgn0027588.1.path1;Name=FBgn0027588.1;Dir=sensecoverage=100.0;identity=99.4;matches=2852;mismatches=16;indels=0;unknowns=0;locus=RLOC_00010302
Chr1	stalkie_big_nohaplotig	exon	113210446	113210523	97	+	.	Parent=FBgn0027588.1.mrna1;Target=FBgn0027588.1 1 78 +
Chr1	stalkie_big_nohaplotig	exon	113210787	113210902	97	+	.	Parent=FBgn0027588.1.mrna1;Target=FBgn0027588.1 79 194 +
Chr1	stalkie_big_nohaplotig	exon	113210962	113211103	100	+	.	Parent=FBgn0027588.1.mrna1;Target=FBgn0027588.1 195 336 +
Chr1	stalkie_big_nohaplotig	exon	113211163	113211257	100	+	.	Parent=FBgn0027588.1.mrna1;Target=FBgn0027588.1 337 431 +
Chr1	stalkie_big_nohaplotig	exon	113211315	113211839	98	+	.	Parent=FBgn0027588.1.mrna1;Target=FBgn0027588.1 432 956 +
Chr1	stalkie_big_nohaplotig	exon	113211914	113212020	100	+	.	Parent=FBgn0027588.1.mrna1;Target=FBgn0027588.1 957 1063 +
Chr1	stalkie_big_nohaplotig	exon	113212082	113212549	99	+	.	Parent=FBgn0027588.1.mrna1;Target=FBgn0027588.1 1064 1531 +
Chr1	stalkie_big_nohaplotig	exon	113214541	113215451	99	+	.	Parent=FBgn0027588.1.mrna1;Target=FBgn0027588.1 1532 2442 +
Chr1	stalkie_big_nohaplotig	exon	113215510	113215935	99	+	.	Parent=FBgn0027588.1.mrna1;Target=FBgn0027588.1 2443 2868 +
Chr1	stalkie_big_nohaplotig	CDS	113210446	113210523	.	+	0	Parent=FBgn0027588.1.mrna1;Target=FBgn0027588.1 1 78 +
Chr1	stalkie_big_nohaplotig	CDS	113210787	113210902	.	+	0	Parent=FBgn0027588.1.mrna1;Target=FBgn0027588.1 79 194 +
Chr1	stalkie_big_nohaplotig	CDS	113210962	113211103	.	+	1	Parent=FBgn0027588.1.mrna1;Target=FBgn0027588.1 195 336 +
Chr1	stalkie_big_nohaplotig	CDS	113211163	113211257	.	+	0	Parent=FBgn0027588.1.mrna1;Target=FBgn0027588.1 337 431 +
Chr1	stalkie_big_nohaplotig	CDS	113211315	113211839	.	+	1	Parent=FBgn0027588.1.mrna1;Target=FBgn0027588.1 432 956 +
Chr1	stalkie_big_nohaplotig	CDS	113211914	113212020	.	+	1	Parent=FBgn0027588.1.mrna1;Target=FBgn0027588.1 957 1063 +
Chr1	stalkie_big_nohaplotig	CDS	113212082	113212549	.	+	2	Parent=FBgn0027588.1.mrna1;Target=FBgn0027588.1 1064 1531 +
Chr1	stalkie_big_nohaplotig	CDS	113214541	113215451	.	+	2	Parent=FBgn0027588.1.mrna1;Target=FBgn0027588.1 1532 2442 +
Chr1	stalkie_big_nohaplotig	CDS	113215510	113215935	.	+	0	Parent=FBgn0027588.1.mrna1;Target=FBgn0027588.1 2443 2868 +
Chr1	gffcl	locus	113281231	113281579	.	+	.	ID=RLOC_00010304;geneIDs=comp149829_c0_seq1.path1;transcripts=comp149829_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113281231	113281579	.	+	.	ID=comp149829_c0_seq1.mrna1;geneID=comp149829_c0_seq1.path1;Name=comp149829_c0_seq1;Dir=indeterminatecoverage=93.3;identity=100.0;matches=349;mismatches=0;indels=0;unknowns=0;Target=comp149829_c0_seq1 350 2 .;CDS_Target=comp149829_c0_seq1 319 131 .;locus=RLOC_00010304
Chr1	stalkie_big_nohaplotig	exon	113281231	113281579	100	+	.	Parent=comp149829_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	113281360	113281548	.	+	0	Parent=comp149829_c0_seq1.mrna1
Chr1	gffcl	locus	113286284	113315515	.	+	.	ID=RLOC_00010305;geneIDs=comp150185_c0_seq1.path1;transcripts=comp150185_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113286284	113315515	.	+	.	ID=comp150185_c0_seq1.mrna1;geneID=comp150185_c0_seq1.path1;Name=comp150185_c0_seq1;Dir=antisensecoverage=100.0;identity=98.0;matches=348;mismatches=7;indels=0;unknowns=0;Target=comp150185_c0_seq1 123 227 .;locus=RLOC_00010305
Chr1	stalkie_big_nohaplotig	exon	113286284	113286383	99	+	.	Parent=comp150185_c0_seq1.mrna1;Target=comp150185_c0_seq1 256 355 -
Chr1	stalkie_big_nohaplotig	exon	113315261	113315515	97	+	.	Parent=comp150185_c0_seq1.mrna1;Target=comp150185_c0_seq1 1 255 -
Chr1	stalkie_big_nohaplotig	CDS	113315289	113315393	.	+	0	Parent=comp150185_c0_seq1.mrna1
Chr1	gffcl	locus	113387612	113389561	.	-	.	ID=RLOC_00010307;geneIDs=comp161425_c0_seq1.path1;transcripts=comp161425_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113387612	113389561	.	-	.	ID=comp161425_c0_seq1.mrna1;geneID=comp161425_c0_seq1.path1;Name=comp161425_c0_seq1;Dir=indeterminatecoverage=69.6;identity=99.6;matches=1943;mismatches=6;indels=1;unknowns=0;Target=comp161425_c0_seq1 1954 6 .;CDS_Target=comp161425_c0_seq1 1591 1082 .;locus=RLOC_00010307
Chr1	stalkie_big_nohaplotig	exon	113387612	113389561	99	-	.	Parent=comp161425_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	113387976	113388485	.	-	0	Parent=comp161425_c0_seq1.mrna1
Chr1	gffcl	locus	113397356	113398475	.	+	.	ID=RLOC_00010308;geneIDs=comp155284_c0_seq1.path1;transcripts=comp155284_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113397356	113398475	.	+	.	ID=comp155284_c0_seq1.mrna1;geneID=comp155284_c0_seq1.path1;Name=comp155284_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.0;matches=1109;mismatches=11;indels=35;unknowns=0;Target=comp155284_c0_seq1 1155 1 .;CDS_Target=comp155284_c0_seq1 170 3 .;locus=RLOC_00010308
Chr1	stalkie_big_nohaplotig	exon	113397356	113398475	96	+	.	Parent=comp155284_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	113397358	113397525	.	+	0	Parent=comp155284_c0_seq1.mrna1
Chr1	gffcl	locus	113404065	113404993	.	-	.	ID=RLOC_00010309;geneIDs=comp159774_c1_seq1.path1;transcripts=comp159774_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113404065	113404993	.	-	.	ID=comp159774_c1_seq1.mrna1;geneID=comp159774_c1_seq1.path1;Name=comp159774_c1_seq1;Dir=sensecoverage=100.0;identity=96.7;matches=859;mismatches=11;indels=18;unknowns=0;locus=RLOC_00010309
Chr1	stalkie_big_nohaplotig	exon	113404065	113404684	96	-	.	Parent=comp159774_c1_seq1.mrna1;Target=comp159774_c1_seq1 251 884 +
Chr1	stalkie_big_nohaplotig	exon	113404740	113404993	97	-	.	Parent=comp159774_c1_seq1.mrna1;Target=comp159774_c1_seq1 1 250 +
Chr1	stalkie_big_nohaplotig	CDS	113404331	113404684	.	-	0	Parent=comp159774_c1_seq1.mrna1;Target=comp159774_c1_seq1 251 604 +
Chr1	stalkie_big_nohaplotig	CDS	113404740	113404745	.	-	0	Parent=comp159774_c1_seq1.mrna1;Target=comp159774_c1_seq1 245 250 +
Chr1	gffcl	locus	113412158	113412634	.	-	.	ID=RLOC_00010310;geneIDs=comp149865_c0_seq1.path1;transcripts=comp149865_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113412158	113412634	.	-	.	ID=comp149865_c0_seq1.mrna1;geneID=comp149865_c0_seq1.path1;Name=comp149865_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=473;mismatches=4;indels=2;unknowns=0;Target=comp149865_c0_seq1 479 1 .;CDS_Target=comp149865_c0_seq1 454 332 .;locus=RLOC_00010310
Chr1	stalkie_big_nohaplotig	exon	113412158	113412634	98	-	.	Parent=comp149865_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	113412183	113412305	.	-	0	Parent=comp149865_c0_seq1.mrna1
Chr1	gffcl	locus	113413713	113419110	.	-	.	ID=RLOC_00010311;geneIDs=comp161708_c0_seq1.path1;transcripts=comp161708_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113413713	113419110	.	-	.	ID=comp161708_c0_seq1.mrna1;geneID=comp161708_c0_seq1.path1;Name=comp161708_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.8;matches=964;mismatches=46;indels=52;unknowns=0;Target=comp161708_c0_seq1 736 644 .;locus=RLOC_00010311
Chr1	stalkie_big_nohaplotig	exon	113413713	113413929	81	-	.	Parent=comp161708_c0_seq1.mrna1;Target=comp161708_c0_seq1 1256 1038 .
Chr1	stalkie_big_nohaplotig	exon	113416650	113416714	52	-	.	Parent=comp161708_c0_seq1.mrna1;Target=comp161708_c0_seq1 851 794 .
Chr1	stalkie_big_nohaplotig	exon	113418360	113419110	97	-	.	Parent=comp161708_c0_seq1.mrna1;Target=comp161708_c0_seq1 762 1 .
Chr1	stalkie_big_nohaplotig	CDS	113418386	113418478	.	-	0	Parent=comp161708_c0_seq1.mrna1
Chr1	gffcl	locus	113429594	113430353	.	-	.	ID=RLOC_00010312;geneIDs=comp160498_c0_seq1.path2;transcripts=comp160498_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	113429594	113430353	.	-	.	ID=comp160498_c0_seq1.mrna2;geneID=comp160498_c0_seq1.path2;Name=comp160498_c0_seq1;Dir=indeterminatecoverage=93.6;identity=98.4;matches=748;mismatches=12;indels=0;unknowns=0;Target=comp160498_c0_seq1 812 53 .;CDS_Target=comp160498_c0_seq1 247 179 .;locus=RLOC_00010312
Chr1	stalkie_big_nohaplotig	exon	113429594	113430353	98	-	.	Parent=comp160498_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	113430159	113430227	.	-	0	Parent=comp160498_c0_seq1.mrna2
Chr1	gffcl	locus	113475670	113477716	.	+	.	ID=RLOC_00010314;geneIDs=comp163683_c3_seq1.path1;transcripts=comp163683_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113475670	113477716	.	+	.	ID=comp163683_c3_seq1.mrna1;geneID=comp163683_c3_seq1.path1;Name=comp163683_c3_seq1;Dir=indeterminatecoverage=78.4;identity=99.3;matches=1033;mismatches=7;indels=0;unknowns=0;Target=comp163683_c3_seq1 293 132 .;locus=RLOC_00010314
Chr1	stalkie_big_nohaplotig	exon	113475670	113476419	99	+	.	Parent=comp163683_c3_seq1.mrna1;Target=comp163683_c3_seq1 751 2 .
Chr1	stalkie_big_nohaplotig	exon	113477427	113477716	98	+	.	Parent=comp163683_c3_seq1.mrna1;Target=comp163683_c3_seq1 1041 752 .
Chr1	stalkie_big_nohaplotig	CDS	113475800	113475961	.	+	0	Parent=comp163683_c3_seq1.mrna1
Chr1	gffcl	locus	113484052	113529244	.	+	.	ID=RLOC_00010315;geneIDs=FBgn0031118.1.path1,comp160878_c2_seq1.path1;transcripts=comp160878_c2_seq1.mrna1,FBgn0031118.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113484052	113529244	.	+	.	ID=comp160878_c2_seq1.mrna1;geneID=comp160878_c2_seq1.path1;Name=comp160878_c2_seq1;Dir=sensecoverage=96.9;identity=99.8;matches=7406;mismatches=9;indels=5;unknowns=0;locus=RLOC_00010315
Chr1	stalkie_big_nohaplotig	exon	113484052	113484683	98	+	.	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 239 866 +
Chr1	stalkie_big_nohaplotig	exon	113485081	113485311	100	+	.	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 867 1097 +
Chr1	stalkie_big_nohaplotig	exon	113485397	113485707	100	+	.	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 1098 1408 +
Chr1	stalkie_big_nohaplotig	exon	113517417	113518088	99	+	.	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 1409 2080 +
Chr1	stalkie_big_nohaplotig	exon	113521401	113521753	100	+	.	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 2081 2433 +
Chr1	stalkie_big_nohaplotig	exon	113521847	113521933	100	+	.	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 2434 2520 +
Chr1	stalkie_big_nohaplotig	exon	113522026	113522458	100	+	.	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 2521 2953 +
Chr1	stalkie_big_nohaplotig	exon	113522529	113522649	100	+	.	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 2954 3074 +
Chr1	stalkie_big_nohaplotig	exon	113524340	113524438	100	+	.	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 3075 3173 +
Chr1	stalkie_big_nohaplotig	exon	113524501	113524773	100	+	.	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 3174 3446 +
Chr1	stalkie_big_nohaplotig	exon	113524843	113525193	100	+	.	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 3447 3797 +
Chr1	stalkie_big_nohaplotig	exon	113525250	113525792	100	+	.	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 3798 4340 +
Chr1	stalkie_big_nohaplotig	exon	113525855	113526614	99	+	.	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 4341 5100 +
Chr1	stalkie_big_nohaplotig	exon	113526692	113529244	99	+	.	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 5101 7654 +
Chr1	stalkie_big_nohaplotig	CDS	113484540	113484683	.	+	0	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 723 866 +
Chr1	stalkie_big_nohaplotig	CDS	113485081	113485311	.	+	0	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 867 1097 +
Chr1	stalkie_big_nohaplotig	CDS	113485397	113485707	.	+	0	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 1098 1408 +
Chr1	stalkie_big_nohaplotig	CDS	113517417	113518088	.	+	1	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 1409 2080 +
Chr1	stalkie_big_nohaplotig	CDS	113521401	113521753	.	+	1	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 2081 2433 +
Chr1	stalkie_big_nohaplotig	CDS	113521847	113521933	.	+	2	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 2434 2520 +
Chr1	stalkie_big_nohaplotig	CDS	113522026	113522458	.	+	2	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 2521 2953 +
Chr1	stalkie_big_nohaplotig	CDS	113522529	113522649	.	+	1	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 2954 3074 +
Chr1	stalkie_big_nohaplotig	CDS	113524340	113524438	.	+	0	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 3075 3173 +
Chr1	stalkie_big_nohaplotig	CDS	113524501	113524773	.	+	0	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 3174 3446 +
Chr1	stalkie_big_nohaplotig	CDS	113524843	113525193	.	+	0	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 3447 3797 +
Chr1	stalkie_big_nohaplotig	CDS	113525250	113525792	.	+	0	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 3798 4340 +
Chr1	stalkie_big_nohaplotig	CDS	113525855	113526614	.	+	0	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 4341 5100 +
Chr1	stalkie_big_nohaplotig	CDS	113526692	113527842	.	+	2	Parent=comp160878_c2_seq1.mrna1;Target=comp160878_c2_seq1 5101 6251 +
Chr1	stalkie_big_nohaplotig	mRNA	113484465	113527089	.	+	.	ID=FBgn0031118.1.mrna1;geneID=FBgn0031118.1.path1;Name=FBgn0031118.1;Dir=sensecoverage=100.0;identity=99.9;matches=4658;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010315
Chr1	stalkie_big_nohaplotig	exon	113484465	113484683	100	+	.	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 1 219 +
Chr1	stalkie_big_nohaplotig	exon	113485081	113485311	100	+	.	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 220 450 +
Chr1	stalkie_big_nohaplotig	exon	113485397	113485707	100	+	.	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 451 761 +
Chr1	stalkie_big_nohaplotig	exon	113517417	113518088	99	+	.	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 762 1433 +
Chr1	stalkie_big_nohaplotig	exon	113521401	113521753	100	+	.	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 1434 1786 +
Chr1	stalkie_big_nohaplotig	exon	113521847	113521933	100	+	.	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 1787 1873 +
Chr1	stalkie_big_nohaplotig	exon	113522026	113522458	100	+	.	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 1874 2306 +
Chr1	stalkie_big_nohaplotig	exon	113522529	113522649	100	+	.	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 2307 2427 +
Chr1	stalkie_big_nohaplotig	exon	113524340	113524438	100	+	.	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 2428 2526 +
Chr1	stalkie_big_nohaplotig	exon	113524501	113524773	100	+	.	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 2527 2799 +
Chr1	stalkie_big_nohaplotig	exon	113524843	113525193	100	+	.	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 2800 3150 +
Chr1	stalkie_big_nohaplotig	exon	113525250	113525792	100	+	.	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 3151 3693 +
Chr1	stalkie_big_nohaplotig	exon	113525855	113526124	99	+	.	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 3694 3963 +
Chr1	stalkie_big_nohaplotig	exon	113526314	113526614	100	+	.	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 3964 4264 +
Chr1	stalkie_big_nohaplotig	exon	113526692	113527089	100	+	.	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 4265 4662 +
Chr1	stalkie_big_nohaplotig	CDS	113484465	113484683	.	+	0	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 1 219 +
Chr1	stalkie_big_nohaplotig	CDS	113485081	113485311	.	+	0	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 220 450 +
Chr1	stalkie_big_nohaplotig	CDS	113485397	113485707	.	+	0	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 451 761 +
Chr1	stalkie_big_nohaplotig	CDS	113517417	113518088	.	+	1	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 762 1433 +
Chr1	stalkie_big_nohaplotig	CDS	113521401	113521753	.	+	1	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 1434 1786 +
Chr1	stalkie_big_nohaplotig	CDS	113521847	113521933	.	+	2	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 1787 1873 +
Chr1	stalkie_big_nohaplotig	CDS	113522026	113522458	.	+	2	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 1874 2306 +
Chr1	stalkie_big_nohaplotig	CDS	113522529	113522649	.	+	1	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 2307 2427 +
Chr1	stalkie_big_nohaplotig	CDS	113524340	113524438	.	+	0	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 2428 2526 +
Chr1	stalkie_big_nohaplotig	CDS	113524501	113524773	.	+	0	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 2527 2799 +
Chr1	stalkie_big_nohaplotig	CDS	113524843	113525193	.	+	0	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 2800 3150 +
Chr1	stalkie_big_nohaplotig	CDS	113525250	113525792	.	+	0	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 3151 3693 +
Chr1	stalkie_big_nohaplotig	CDS	113525855	113526124	.	+	0	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 3694 3963 +
Chr1	stalkie_big_nohaplotig	CDS	113526314	113526614	.	+	0	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 3964 4264 +
Chr1	stalkie_big_nohaplotig	CDS	113526692	113527089	.	+	2	Parent=FBgn0031118.1.mrna1;Target=FBgn0031118.1 4265 4662 +
Chr1	gffcl	locus	113529690	113532551	.	-	.	ID=RLOC_00010316;geneIDs=FBgn0031117.1.path1;transcripts=FBgn0031117.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113529690	113532551	.	-	.	ID=FBgn0031117.1.mrna1;geneID=FBgn0031117.1.path1;Name=FBgn0031117.1;Dir=sensecoverage=100.0;identity=99.2;matches=729;mismatches=6;indels=0;unknowns=0;locus=RLOC_00010316
Chr1	stalkie_big_nohaplotig	exon	113529690	113529832	98	-	.	Parent=FBgn0031117.1.mrna1;Target=FBgn0031117.1 593 735 +
Chr1	stalkie_big_nohaplotig	exon	113529964	113530280	99	-	.	Parent=FBgn0031117.1.mrna1;Target=FBgn0031117.1 276 592 +
Chr1	stalkie_big_nohaplotig	exon	113531417	113531522	99	-	.	Parent=FBgn0031117.1.mrna1;Target=FBgn0031117.1 170 275 +
Chr1	stalkie_big_nohaplotig	exon	113531769	113531909	100	-	.	Parent=FBgn0031117.1.mrna1;Target=FBgn0031117.1 29 169 +
Chr1	stalkie_big_nohaplotig	exon	113532524	113532551	100	-	.	Parent=FBgn0031117.1.mrna1;Target=FBgn0031117.1 1 28 +
Chr1	stalkie_big_nohaplotig	CDS	113529690	113529832	.	-	2	Parent=FBgn0031117.1.mrna1;Target=FBgn0031117.1 593 735 +
Chr1	stalkie_big_nohaplotig	CDS	113529964	113530280	.	-	1	Parent=FBgn0031117.1.mrna1;Target=FBgn0031117.1 276 592 +
Chr1	stalkie_big_nohaplotig	CDS	113531417	113531522	.	-	2	Parent=FBgn0031117.1.mrna1;Target=FBgn0031117.1 170 275 +
Chr1	stalkie_big_nohaplotig	CDS	113531769	113531909	.	-	2	Parent=FBgn0031117.1.mrna1;Target=FBgn0031117.1 29 169 +
Chr1	stalkie_big_nohaplotig	CDS	113532524	113532551	.	-	0	Parent=FBgn0031117.1.mrna1;Target=FBgn0031117.1 1 28 +
Chr1	gffcl	locus	113535711	113537276	.	+	.	ID=RLOC_00010317;geneIDs=FBgn0031117.2.path1;transcripts=FBgn0031117.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113535711	113537276	.	+	.	ID=FBgn0031117.2.mrna1;geneID=FBgn0031117.2.path1;Name=FBgn0031117.2;Dir=sensecoverage=100.0;identity=99.3;matches=697;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010317
Chr1	stalkie_big_nohaplotig	exon	113535711	113535849	99	+	.	Parent=FBgn0031117.2.mrna1;Target=FBgn0031117.2 1 139 +
Chr1	stalkie_big_nohaplotig	exon	113535926	113536031	100	+	.	Parent=FBgn0031117.2.mrna1;Target=FBgn0031117.2 140 245 +
Chr1	stalkie_big_nohaplotig	exon	113536751	113537067	98	+	.	Parent=FBgn0031117.2.mrna1;Target=FBgn0031117.2 246 562 +
Chr1	stalkie_big_nohaplotig	exon	113537137	113537276	100	+	.	Parent=FBgn0031117.2.mrna1;Target=FBgn0031117.2 563 702 +
Chr1	stalkie_big_nohaplotig	CDS	113535711	113535849	.	+	0	Parent=FBgn0031117.2.mrna1;Target=FBgn0031117.2 1 139 +
Chr1	stalkie_big_nohaplotig	CDS	113535926	113536031	.	+	2	Parent=FBgn0031117.2.mrna1;Target=FBgn0031117.2 140 245 +
Chr1	stalkie_big_nohaplotig	CDS	113536751	113537067	.	+	1	Parent=FBgn0031117.2.mrna1;Target=FBgn0031117.2 246 562 +
Chr1	stalkie_big_nohaplotig	CDS	113537137	113537276	.	+	2	Parent=FBgn0031117.2.mrna1;Target=FBgn0031117.2 563 702 +
Chr1	gffcl	locus	113545436	113623347	.	+	.	ID=RLOC_00010319;geneIDs=FBgn0259150.1.path1;transcripts=FBgn0259150.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113545436	113623347	.	+	.	ID=FBgn0259150.1.mrna1;geneID=FBgn0259150.1.path1;Name=FBgn0259150.1;Dir=sensecoverage=100.0;identity=99.7;matches=4343;mismatches=13;indels=0;unknowns=0;locus=RLOC_00010319
Chr1	stalkie_big_nohaplotig	exon	113545436	113547327	99	+	.	Parent=FBgn0259150.1.mrna1;Target=FBgn0259150.1 1 1892 +
Chr1	stalkie_big_nohaplotig	exon	113604505	113605245	99	+	.	Parent=FBgn0259150.1.mrna1;Target=FBgn0259150.1 1893 2633 +
Chr1	stalkie_big_nohaplotig	exon	113613027	113613144	100	+	.	Parent=FBgn0259150.1.mrna1;Target=FBgn0259150.1 2634 2751 +
Chr1	stalkie_big_nohaplotig	exon	113618300	113618396	98	+	.	Parent=FBgn0259150.1.mrna1;Target=FBgn0259150.1 2752 2848 +
Chr1	stalkie_big_nohaplotig	exon	113618582	113618779	99	+	.	Parent=FBgn0259150.1.mrna1;Target=FBgn0259150.1 2849 3046 +
Chr1	stalkie_big_nohaplotig	exon	113621762	113621922	100	+	.	Parent=FBgn0259150.1.mrna1;Target=FBgn0259150.1 3047 3207 +
Chr1	stalkie_big_nohaplotig	exon	113622199	113623347	99	+	.	Parent=FBgn0259150.1.mrna1;Target=FBgn0259150.1 3208 4356 +
Chr1	stalkie_big_nohaplotig	CDS	113545436	113547327	.	+	0	Parent=FBgn0259150.1.mrna1;Target=FBgn0259150.1 1 1892 +
Chr1	stalkie_big_nohaplotig	CDS	113604505	113605245	.	+	1	Parent=FBgn0259150.1.mrna1;Target=FBgn0259150.1 1893 2633 +
Chr1	stalkie_big_nohaplotig	CDS	113613027	113613144	.	+	1	Parent=FBgn0259150.1.mrna1;Target=FBgn0259150.1 2634 2751 +
Chr1	stalkie_big_nohaplotig	CDS	113618300	113618396	.	+	0	Parent=FBgn0259150.1.mrna1;Target=FBgn0259150.1 2752 2848 +
Chr1	stalkie_big_nohaplotig	CDS	113618582	113618779	.	+	2	Parent=FBgn0259150.1.mrna1;Target=FBgn0259150.1 2849 3046 +
Chr1	stalkie_big_nohaplotig	CDS	113621762	113621922	.	+	2	Parent=FBgn0259150.1.mrna1;Target=FBgn0259150.1 3047 3207 +
Chr1	stalkie_big_nohaplotig	CDS	113622199	113623347	.	+	0	Parent=FBgn0259150.1.mrna1;Target=FBgn0259150.1 3208 4356 +
Chr1	gffcl	locus	113576933	113745221	.	.	.	ID=RLOC_00010320;geneIDs=comp144930_c0_seq1.path1,comp157474_c0_seq1.path1;transcripts=comp157474_c0_seq1.mrna1,comp144930_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113576933	113745221	.	-	.	ID=comp157474_c0_seq1.mrna1;geneID=comp157474_c0_seq1.path1;Name=comp157474_c0_seq1;Dir=indeterminatecoverage=91.9;identity=86.3;matches=1186;mismatches=62;indels=127;unknowns=0;Target=comp157474_c0_seq1 590 180 .;locus=RLOC_00010320
Chr1	stalkie_big_nohaplotig	exon	113576933	113576940	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1380 1373 .
Chr1	stalkie_big_nohaplotig	exon	113578964	113578972	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1372 1364 .
Chr1	stalkie_big_nohaplotig	exon	113582209	113582227	78	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1363 1345 .
Chr1	stalkie_big_nohaplotig	exon	113583703	113583708	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1344 1339 .
Chr1	stalkie_big_nohaplotig	exon	113584087	113584092	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1338 1333 .
Chr1	stalkie_big_nohaplotig	exon	113585218	113585220	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1332 1330 .
Chr1	stalkie_big_nohaplotig	exon	113596980	113596988	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1329 1321 .
Chr1	stalkie_big_nohaplotig	exon	113606558	113606562	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1320 1316 .
Chr1	stalkie_big_nohaplotig	exon	113614345	113614348	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1315 1312 .
Chr1	stalkie_big_nohaplotig	exon	113631104	113631109	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1311 1306 .
Chr1	stalkie_big_nohaplotig	exon	113638364	113638407	59	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1305 1266 .
Chr1	stalkie_big_nohaplotig	exon	113651314	113651318	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1265 1261 .
Chr1	stalkie_big_nohaplotig	exon	113652905	113652912	75	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1260 1253 .
Chr1	stalkie_big_nohaplotig	exon	113658508	113658514	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1252 1246 .
Chr1	stalkie_big_nohaplotig	exon	113661218	113661220	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1245 1243 .
Chr1	stalkie_big_nohaplotig	exon	113661932	113661936	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1242 1238 .
Chr1	stalkie_big_nohaplotig	exon	113666231	113666237	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1237 1231 .
Chr1	stalkie_big_nohaplotig	exon	113667047	113667050	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1230 1227 .
Chr1	stalkie_big_nohaplotig	exon	113670093	113670098	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1226 1221 .
Chr1	stalkie_big_nohaplotig	exon	113670100	113670106	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1175 1169 .
Chr1	stalkie_big_nohaplotig	exon	113676162	113676169	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1168 1161 .
Chr1	stalkie_big_nohaplotig	exon	113681713	113681719	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1160 1154 .
Chr1	stalkie_big_nohaplotig	exon	113686638	113686647	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1149 1140 .
Chr1	stalkie_big_nohaplotig	exon	113703115	113703123	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1139 1131 .
Chr1	stalkie_big_nohaplotig	exon	113708874	113708888	73	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1130 1116 .
Chr1	stalkie_big_nohaplotig	exon	113714963	113714967	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1115 1111 .
Chr1	stalkie_big_nohaplotig	exon	113718404	113718409	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1110 1105 .
Chr1	stalkie_big_nohaplotig	exon	113721324	113721329	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1104 1099 .
Chr1	stalkie_big_nohaplotig	exon	113721448	113721454	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1098 1092 .
Chr1	stalkie_big_nohaplotig	exon	113724220	113724224	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1091 1087 .
Chr1	stalkie_big_nohaplotig	exon	113732206	113732210	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1086 1082 .
Chr1	stalkie_big_nohaplotig	exon	113737614	113737616	100	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1081 1079 .
Chr1	stalkie_big_nohaplotig	exon	113744187	113745221	85	-	.	Parent=comp157474_c0_seq1.mrna1;Target=comp157474_c0_seq1 1078 1 .
Chr1	stalkie_big_nohaplotig	CDS	113744664	113745019	.	-	0	Parent=comp157474_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113637935	113638841	.	+	.	ID=comp144930_c0_seq1.mrna1;geneID=comp144930_c0_seq1.path1;Name=comp144930_c0_seq1;Dir=indeterminatecoverage=89.1;identity=98.7;matches=902;mismatches=3;indels=9;unknowns=0;Target=comp144930_c0_seq1 934 23 .;CDS_Target=comp144930_c0_seq1 117 25 .;locus=RLOC_00010320
Chr1	stalkie_big_nohaplotig	exon	113637935	113638841	98	+	.	Parent=comp144930_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	113637937	113638029	.	+	0	Parent=comp144930_c0_seq1.mrna1
Chr1	gffcl	locus	113625869	113641315	.	.	.	ID=RLOC_00010321;geneIDs=comp113721_c0_seq1.path1,comp121684_c1_seq1.path1,comp147759_c1_seq1.path1;transcripts=comp121684_c1_seq1.mrna1,comp147759_c1_seq1.mrna1,comp113721_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113625869	113641315	.	-	.	ID=comp121684_c1_seq1.mrna1;geneID=comp121684_c1_seq1.path1;Name=comp121684_c1_seq1;Dir=indeterminatecoverage=82.9;identity=92.8;matches=1116;mismatches=38;indels=48;unknowns=0;Target=comp121684_c1_seq1 1154 1089 .;locus=RLOC_00010321
Chr1	stalkie_big_nohaplotig	exon	113625869	113626786	99	-	.	Parent=comp121684_c1_seq1.mrna1;Target=comp121684_c1_seq1 1560 640 .
Chr1	stalkie_big_nohaplotig	exon	113627446	113627450	100	-	.	Parent=comp121684_c1_seq1.mrna1;Target=comp121684_c1_seq1 639 635 .
Chr1	stalkie_big_nohaplotig	exon	113627606	113627610	100	-	.	Parent=comp121684_c1_seq1.mrna1;Target=comp121684_c1_seq1 634 630 .
Chr1	stalkie_big_nohaplotig	exon	113628638	113628695	53	-	.	Parent=comp121684_c1_seq1.mrna1;Target=comp121684_c1_seq1 629 563 .
Chr1	stalkie_big_nohaplotig	exon	113628881	113628910	65	-	.	Parent=comp121684_c1_seq1.mrna1;Target=comp121684_c1_seq1 562 531 .
Chr1	stalkie_big_nohaplotig	exon	113629148	113629157	100	-	.	Parent=comp121684_c1_seq1.mrna1;Target=comp121684_c1_seq1 530 521 .
Chr1	stalkie_big_nohaplotig	exon	113629188	113629222	42	-	.	Parent=comp121684_c1_seq1.mrna1;Target=comp121684_c1_seq1 465 451 .
Chr1	stalkie_big_nohaplotig	exon	113629238	113629247	100	-	.	Parent=comp121684_c1_seq1.mrna1;Target=comp121684_c1_seq1 396 387 .
Chr1	stalkie_big_nohaplotig	exon	113629399	113629406	100	-	.	Parent=comp121684_c1_seq1.mrna1;Target=comp121684_c1_seq1 386 379 .
Chr1	stalkie_big_nohaplotig	exon	113630131	113630163	69	-	.	Parent=comp121684_c1_seq1.mrna1;Target=comp121684_c1_seq1 378 347 .
Chr1	stalkie_big_nohaplotig	exon	113631097	113631098	100	-	.	Parent=comp121684_c1_seq1.mrna1;Target=comp121684_c1_seq1 346 345 .
Chr1	stalkie_big_nohaplotig	exon	113631765	113631766	100	-	.	Parent=comp121684_c1_seq1.mrna1;Target=comp121684_c1_seq1 344 343 .
Chr1	stalkie_big_nohaplotig	exon	113634323	113634331	100	-	.	Parent=comp121684_c1_seq1.mrna1;Target=comp121684_c1_seq1 342 334 .
Chr1	stalkie_big_nohaplotig	exon	113635221	113635244	66	-	.	Parent=comp121684_c1_seq1.mrna1;Target=comp121684_c1_seq1 319 303 .
Chr1	stalkie_big_nohaplotig	exon	113635743	113635750	100	-	.	Parent=comp121684_c1_seq1.mrna1;Target=comp121684_c1_seq1 302 295 .
Chr1	stalkie_big_nohaplotig	exon	113637168	113637177	100	-	.	Parent=comp121684_c1_seq1.mrna1;Target=comp121684_c1_seq1 294 285 .
Chr1	stalkie_big_nohaplotig	exon	113639692	113639699	100	-	.	Parent=comp121684_c1_seq1.mrna1;Target=comp121684_c1_seq1 284 277 .
Chr1	stalkie_big_nohaplotig	exon	113640921	113640922	100	-	.	Parent=comp121684_c1_seq1.mrna1;Target=comp121684_c1_seq1 276 275 .
Chr1	stalkie_big_nohaplotig	exon	113641308	113641315	100	-	.	Parent=comp121684_c1_seq1.mrna1;Target=comp121684_c1_seq1 274 267 .
Chr1	stalkie_big_nohaplotig	CDS	113626272	113626337	.	-	0	Parent=comp121684_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113628402	113628938	.	-	.	ID=comp147759_c1_seq1.mrna1;geneID=comp147759_c1_seq1.path1;Name=comp147759_c1_seq1;Dir=indeterminatecoverage=100.0;identity=95.9;matches=462;mismatches=16;indels=4;unknowns=0;Target=comp147759_c1_seq1 43 2 .;locus=RLOC_00010321
Chr1	stalkie_big_nohaplotig	exon	113628402	113628713	94	-	.	Parent=comp147759_c1_seq1.mrna1;Target=comp147759_c1_seq1 479 171 .
Chr1	stalkie_big_nohaplotig	exon	113628770	113628938	98	-	.	Parent=comp147759_c1_seq1.mrna1;Target=comp147759_c1_seq1 170 1 .
Chr1	stalkie_big_nohaplotig	CDS	113628896	113628937	.	-	0	Parent=comp147759_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113629245	113629861	.	+	.	ID=comp113721_c0_seq1.mrna1;geneID=comp113721_c0_seq1.path1;Name=comp113721_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.5;matches=615;mismatches=1;indels=2;unknowns=0;Target=comp113721_c0_seq1 620 4 .;CDS_Target=comp113721_c0_seq1 86 6 .;locus=RLOC_00010321
Chr1	stalkie_big_nohaplotig	exon	113629245	113629861	99	+	.	Parent=comp113721_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	113629247	113629327	.	+	0	Parent=comp113721_c0_seq1.mrna1
Chr1	gffcl	locus	113714073	113732801	.	+	.	ID=RLOC_00010322;geneIDs=FBgn0259994.1.path1;transcripts=FBgn0259994.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113714073	113732801	.	+	.	ID=FBgn0259994.1.mrna1;geneID=FBgn0259994.1.path1;Name=FBgn0259994.1;Dir=sensecoverage=100.0;identity=99.8;matches=2531;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010322
Chr1	stalkie_big_nohaplotig	exon	113714073	113714116	100	+	.	Parent=FBgn0259994.1.mrna1;Target=FBgn0259994.1 1 44 +
Chr1	stalkie_big_nohaplotig	exon	113714333	113714517	100	+	.	Parent=FBgn0259994.1.mrna1;Target=FBgn0259994.1 45 229 +
Chr1	stalkie_big_nohaplotig	exon	113714640	113714788	100	+	.	Parent=FBgn0259994.1.mrna1;Target=FBgn0259994.1 230 378 +
Chr1	stalkie_big_nohaplotig	exon	113726830	113726941	100	+	.	Parent=FBgn0259994.1.mrna1;Target=FBgn0259994.1 379 490 +
Chr1	stalkie_big_nohaplotig	exon	113727002	113727162	100	+	.	Parent=FBgn0259994.1.mrna1;Target=FBgn0259994.1 491 651 +
Chr1	stalkie_big_nohaplotig	exon	113729474	113730858	99	+	.	Parent=FBgn0259994.1.mrna1;Target=FBgn0259994.1 652 2036 +
Chr1	stalkie_big_nohaplotig	exon	113731803	113732163	100	+	.	Parent=FBgn0259994.1.mrna1;Target=FBgn0259994.1 2037 2397 +
Chr1	stalkie_big_nohaplotig	exon	113732664	113732801	100	+	.	Parent=FBgn0259994.1.mrna1;Target=FBgn0259994.1 2398 2535 +
Chr1	stalkie_big_nohaplotig	CDS	113714073	113714116	.	+	0	Parent=FBgn0259994.1.mrna1;Target=FBgn0259994.1 1 44 +
Chr1	stalkie_big_nohaplotig	CDS	113714333	113714517	.	+	1	Parent=FBgn0259994.1.mrna1;Target=FBgn0259994.1 45 229 +
Chr1	stalkie_big_nohaplotig	CDS	113714640	113714788	.	+	2	Parent=FBgn0259994.1.mrna1;Target=FBgn0259994.1 230 378 +
Chr1	stalkie_big_nohaplotig	CDS	113726830	113726941	.	+	0	Parent=FBgn0259994.1.mrna1;Target=FBgn0259994.1 379 490 +
Chr1	stalkie_big_nohaplotig	CDS	113727002	113727162	.	+	2	Parent=FBgn0259994.1.mrna1;Target=FBgn0259994.1 491 651 +
Chr1	stalkie_big_nohaplotig	CDS	113729474	113730858	.	+	0	Parent=FBgn0259994.1.mrna1;Target=FBgn0259994.1 652 2036 +
Chr1	stalkie_big_nohaplotig	CDS	113731803	113732163	.	+	1	Parent=FBgn0259994.1.mrna1;Target=FBgn0259994.1 2037 2397 +
Chr1	stalkie_big_nohaplotig	CDS	113732664	113732801	.	+	0	Parent=FBgn0259994.1.mrna1;Target=FBgn0259994.1 2398 2535 +
Chr1	gffcl	locus	113734064	113734700	.	+	.	ID=RLOC_00010323;geneIDs=comp150297_c0_seq1.path1;transcripts=comp150297_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113734064	113734700	.	+	.	ID=comp150297_c0_seq1.mrna1;geneID=comp150297_c0_seq1.path1;Name=comp150297_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=621;mismatches=16;indels=2;unknowns=0;Target=comp150297_c0_seq1 639 1 .;CDS_Target=comp150297_c0_seq1 97 53 .;locus=RLOC_00010323
Chr1	stalkie_big_nohaplotig	exon	113734064	113734700	97	+	.	Parent=comp150297_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	113734116	113734160	.	+	0	Parent=comp150297_c0_seq1.mrna1
Chr1	gffcl	locus	113740499	113742083	.	-	.	ID=RLOC_00010324;geneIDs=comp160487_c0_seq1.path1;transcripts=comp160487_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113740499	113742083	.	-	.	ID=comp160487_c0_seq1.mrna1;geneID=comp160487_c0_seq1.path1;Name=comp160487_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.3;matches=1576;mismatches=9;indels=18;unknowns=0;Target=comp160487_c0_seq1 1603 1 .;CDS_Target=comp160487_c0_seq1 1551 1396 .;locus=RLOC_00010324
Chr1	stalkie_big_nohaplotig	exon	113740499	113742083	98	-	.	Parent=comp160487_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	113740551	113740706	.	-	0	Parent=comp160487_c0_seq1.mrna1
Chr1	gffcl	locus	113742462	113742966	.	-	.	ID=RLOC_00010325;geneIDs=comp151183_c0_seq1.path1;transcripts=comp151183_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113742462	113742966	.	-	.	ID=comp151183_c0_seq1.mrna1;geneID=comp151183_c0_seq1.path1;Name=comp151183_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=505;mismatches=0;indels=0;unknowns=0;Target=comp151183_c0_seq1 505 1 .;CDS_Target=comp151183_c0_seq1 166 2 .;locus=RLOC_00010325
Chr1	stalkie_big_nohaplotig	exon	113742462	113742966	100	-	.	Parent=comp151183_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	113742801	113742965	.	-	0	Parent=comp151183_c0_seq1.mrna1
Chr1	gffcl	locus	113743502	113743893	.	+	.	ID=RLOC_00010326;geneIDs=comp158816_c0_seq1.path1;transcripts=comp158816_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113743502	113743893	.	+	.	ID=comp158816_c0_seq1.mrna1;geneID=comp158816_c0_seq1.path1;Name=comp158816_c0_seq1;Dir=indeterminatecoverage=82.3;identity=77.7;matches=227;mismatches=13;indels=52;unknowns=100;Target=comp158816_c0_seq1 340 1 .;CDS_Target=comp158816_c0_seq1 276 166 .;locus=RLOC_00010326
Chr1	stalkie_big_nohaplotig	exon	113743502	113743893	77	+	.	Parent=comp158816_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	113743719	113743829	.	+	0	Parent=comp158816_c0_seq1.mrna1
Chr1	gffcl	locus	113751692	113754007	.	+	.	ID=RLOC_00010327;geneIDs=FBgn0039417.1.path1;transcripts=FBgn0039417.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113751692	113754007	.	+	.	ID=FBgn0039417.1.mrna1;geneID=FBgn0039417.1.path1;Name=FBgn0039417.1;Dir=sensecoverage=100.0;identity=99.3;matches=1129;mismatches=7;indels=1;unknowns=0;Target=FBgn0039417.1 3 47 +;locus=RLOC_00010327
Chr1	stalkie_big_nohaplotig	exon	113751692	113751814	96	+	.	Parent=FBgn0039417.1.mrna1;Target=FBgn0039417.1 1 124 +
Chr1	stalkie_big_nohaplotig	exon	113752007	113752191	100	+	.	Parent=FBgn0039417.1.mrna1;Target=FBgn0039417.1 125 309 +
Chr1	stalkie_big_nohaplotig	exon	113752249	113752468	98	+	.	Parent=FBgn0039417.1.mrna1;Target=FBgn0039417.1 310 529 +
Chr1	stalkie_big_nohaplotig	exon	113752526	113752809	100	+	.	Parent=FBgn0039417.1.mrna1;Target=FBgn0039417.1 530 813 +
Chr1	stalkie_big_nohaplotig	exon	113752870	113753087	99	+	.	Parent=FBgn0039417.1.mrna1;Target=FBgn0039417.1 814 1031 +
Chr1	stalkie_big_nohaplotig	exon	113753902	113754007	100	+	.	Parent=FBgn0039417.1.mrna1;Target=FBgn0039417.1 1032 1137 +
Chr1	stalkie_big_nohaplotig	CDS	113751694	113751737	.	+	0	Parent=FBgn0039417.1.mrna1
Chr1	gffcl	locus	113755779	113758434	.	+	.	ID=RLOC_00010328;geneIDs=FBgn0025815.1.path1;transcripts=FBgn0025815.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113755779	113758434	.	+	.	ID=FBgn0025815.1.mrna1;geneID=FBgn0025815.1.path1;Name=FBgn0025815.1;Dir=sensecoverage=100.0;identity=99.4;matches=2453;mismatches=16;indels=0;unknowns=0;locus=RLOC_00010328
Chr1	stalkie_big_nohaplotig	exon	113755779	113755879	100	+	.	Parent=FBgn0025815.1.mrna1;Target=FBgn0025815.1 1 101 +
Chr1	stalkie_big_nohaplotig	exon	113755943	113756086	98	+	.	Parent=FBgn0025815.1.mrna1;Target=FBgn0025815.1 102 245 +
Chr1	stalkie_big_nohaplotig	exon	113756146	113757032	98	+	.	Parent=FBgn0025815.1.mrna1;Target=FBgn0025815.1 246 1132 +
Chr1	stalkie_big_nohaplotig	exon	113757098	113758434	99	+	.	Parent=FBgn0025815.1.mrna1;Target=FBgn0025815.1 1133 2469 +
Chr1	stalkie_big_nohaplotig	CDS	113755779	113755879	.	+	0	Parent=FBgn0025815.1.mrna1;Target=FBgn0025815.1 1 101 +
Chr1	stalkie_big_nohaplotig	CDS	113755943	113756086	.	+	1	Parent=FBgn0025815.1.mrna1;Target=FBgn0025815.1 102 245 +
Chr1	stalkie_big_nohaplotig	CDS	113756146	113757032	.	+	1	Parent=FBgn0025815.1.mrna1;Target=FBgn0025815.1 246 1132 +
Chr1	stalkie_big_nohaplotig	CDS	113757098	113758434	.	+	2	Parent=FBgn0025815.1.mrna1;Target=FBgn0025815.1 1133 2469 +
Chr1	gffcl	locus	113793960	113824838	.	+	.	ID=RLOC_00010330;geneIDs=FBgn0004034.1.path1;transcripts=FBgn0004034.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113793960	113824838	.	+	.	ID=FBgn0004034.1.mrna1;geneID=FBgn0004034.1.path1;Name=FBgn0004034.1;Dir=sensecoverage=100.0;identity=99.6;matches=1536;mismatches=6;indels=0;unknowns=0;locus=RLOC_00010330
Chr1	stalkie_big_nohaplotig	exon	113793960	113794203	99	+	.	Parent=FBgn0004034.1.mrna1;Target=FBgn0004034.1 1 244 +
Chr1	stalkie_big_nohaplotig	exon	113823541	113824838	99	+	.	Parent=FBgn0004034.1.mrna1;Target=FBgn0004034.1 245 1542 +
Chr1	stalkie_big_nohaplotig	CDS	113793960	113794203	.	+	0	Parent=FBgn0004034.1.mrna1;Target=FBgn0004034.1 1 244 +
Chr1	stalkie_big_nohaplotig	CDS	113823541	113824838	.	+	2	Parent=FBgn0004034.1.mrna1;Target=FBgn0004034.1 245 1542 +
Chr1	gffcl	locus	113839222	113840375	.	-	.	ID=RLOC_00010331;geneIDs=comp163261_c0_seq1.path1;transcripts=comp163261_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113839222	113840375	.	-	.	ID=comp163261_c0_seq1.mrna1;geneID=comp163261_c0_seq1.path1;Name=comp163261_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=1137;mismatches=17;indels=0;unknowns=0;Target=comp163261_c0_seq1 1154 1 .;CDS_Target=comp163261_c0_seq1 953 114 .;locus=RLOC_00010331
Chr1	stalkie_big_nohaplotig	exon	113839222	113840375	98	-	.	Parent=comp163261_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	113839423	113840262	.	-	0	Parent=comp163261_c0_seq1.mrna1
Chr1	gffcl	locus	113857593	113858000	.	-	.	ID=RLOC_00010332;geneIDs=comp129071_c1_seq1.path1;transcripts=comp129071_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113857593	113858000	.	-	.	ID=comp129071_c1_seq1.mrna1;geneID=comp129071_c1_seq1.path1;Name=comp129071_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=407;mismatches=1;indels=0;unknowns=0;Target=comp129071_c1_seq1 408 1 .;CDS_Target=comp129071_c1_seq1 73 2 .;locus=RLOC_00010332
Chr1	stalkie_big_nohaplotig	exon	113857593	113858000	99	-	.	Parent=comp129071_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	113857928	113857999	.	-	0	Parent=comp129071_c1_seq1.mrna1
Chr1	gffcl	locus	113918940	113920303	.	+	.	ID=RLOC_00010333;geneIDs=comp154963_c0_seq1.path1;transcripts=comp154963_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113918940	113920303	.	+	.	ID=comp154963_c0_seq1.mrna1;geneID=comp154963_c0_seq1.path1;Name=comp154963_c0_seq1;Dir=sensecoverage=93.4;identity=99.1;matches=636;mismatches=2;indels=4;unknowns=0;Target=comp154963_c0_seq1 35 97 +;locus=RLOC_00010333
Chr1	stalkie_big_nohaplotig	exon	113918940	113919074	96	+	.	Parent=comp154963_c0_seq1.mrna1;Target=comp154963_c0_seq1 33 171 +
Chr1	stalkie_big_nohaplotig	exon	113919740	113919919	100	+	.	Parent=comp154963_c0_seq1.mrna1;Target=comp154963_c0_seq1 172 351 +
Chr1	stalkie_big_nohaplotig	exon	113919981	113920303	99	+	.	Parent=comp154963_c0_seq1.mrna1;Target=comp154963_c0_seq1 352 674 +
Chr1	stalkie_big_nohaplotig	CDS	113918942	113919000	.	+	0	Parent=comp154963_c0_seq1.mrna1
Chr1	gffcl	locus	113927116	113928616	.	+	.	ID=RLOC_00010334;geneIDs=comp151225_c0_seq1.path1;transcripts=comp151225_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113927116	113928616	.	+	.	ID=comp151225_c0_seq1.mrna1;geneID=comp151225_c0_seq1.path1;Name=comp151225_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=506;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010334
Chr1	stalkie_big_nohaplotig	exon	113927116	113927208	100	+	.	Parent=comp151225_c0_seq1.mrna1;Target=comp151225_c0_seq1 1 93 +
Chr1	stalkie_big_nohaplotig	exon	113928144	113928323	100	+	.	Parent=comp151225_c0_seq1.mrna1;Target=comp151225_c0_seq1 94 273 +
Chr1	stalkie_big_nohaplotig	exon	113928384	113928616	100	+	.	Parent=comp151225_c0_seq1.mrna1;Target=comp151225_c0_seq1 274 506 +
Chr1	stalkie_big_nohaplotig	CDS	113927148	113927208	.	+	0	Parent=comp151225_c0_seq1.mrna1;Target=comp151225_c0_seq1 33 93 +
Chr1	stalkie_big_nohaplotig	CDS	113928144	113928323	.	+	2	Parent=comp151225_c0_seq1.mrna1;Target=comp151225_c0_seq1 94 273 +
Chr1	stalkie_big_nohaplotig	CDS	113928384	113928592	.	+	2	Parent=comp151225_c0_seq1.mrna1;Target=comp151225_c0_seq1 274 482 +
Chr1	gffcl	locus	113931630	113932735	.	+	.	ID=RLOC_00010335;geneIDs=comp146854_c0_seq1.path1;transcripts=comp146854_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113931630	113932735	.	+	.	ID=comp146854_c0_seq1.mrna1;geneID=comp146854_c0_seq1.path1;Name=comp146854_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=813;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010335
Chr1	stalkie_big_nohaplotig	exon	113931630	113931858	100	+	.	Parent=comp146854_c0_seq1.mrna1;Target=comp146854_c0_seq1 585 813 -
Chr1	stalkie_big_nohaplotig	exon	113932069	113932248	100	+	.	Parent=comp146854_c0_seq1.mrna1;Target=comp146854_c0_seq1 405 584 -
Chr1	stalkie_big_nohaplotig	exon	113932332	113932735	100	+	.	Parent=comp146854_c0_seq1.mrna1;Target=comp146854_c0_seq1 1 404 -
Chr1	stalkie_big_nohaplotig	CDS	113931798	113931858	.	+	0	Parent=comp146854_c0_seq1.mrna1;Target=comp146854_c0_seq1 585 645 .
Chr1	stalkie_big_nohaplotig	CDS	113932069	113932248	.	+	2	Parent=comp146854_c0_seq1.mrna1;Target=comp146854_c0_seq1 405 584 .
Chr1	stalkie_big_nohaplotig	CDS	113932332	113932549	.	+	2	Parent=comp146854_c0_seq1.mrna1;Target=comp146854_c0_seq1 187 404 .
Chr1	gffcl	locus	113986813	113987604	.	-	.	ID=RLOC_00010336;geneIDs=FBgn0002561.1.path1;transcripts=FBgn0002561.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	113986813	113987604	.	-	.	ID=FBgn0002561.1.mrna1;geneID=FBgn0002561.1.path1;Name=FBgn0002561.1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=772;mismatches=20;indels=0;unknowns=0;Target=FBgn0002561.1 792 1 .;locus=RLOC_00010336
Chr1	stalkie_big_nohaplotig	exon	113986813	113987604	97	-	.	Parent=FBgn0002561.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	113986813	113987604	.	-	0	Parent=FBgn0002561.1.mrna1
Chr1	gffcl	locus	114031775	114032182	.	-	.	ID=RLOC_00010337;geneIDs=comp129071_c1_seq1.path2;transcripts=comp129071_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	114031775	114032182	.	-	.	ID=comp129071_c1_seq1.mrna2;geneID=comp129071_c1_seq1.path2;Name=comp129071_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=407;mismatches=1;indels=0;unknowns=0;Target=comp129071_c1_seq1 408 1 .;CDS_Target=comp129071_c1_seq1 73 2 .;locus=RLOC_00010337
Chr1	stalkie_big_nohaplotig	exon	114031775	114032182	99	-	.	Parent=comp129071_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	114032110	114032181	.	-	0	Parent=comp129071_c1_seq1.mrna2
Chr1	gffcl	locus	114040236	114041218	.	-	.	ID=RLOC_00010338;geneIDs=FBgn0004170.1.path1;transcripts=FBgn0004170.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114040236	114041218	.	-	.	ID=FBgn0004170.1.mrna1;geneID=FBgn0004170.1.path1;Name=FBgn0004170.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=975;mismatches=0;indels=8;unknowns=0;Target=FBgn0004170.1 975 1 .;CDS_Target=FBgn0004170.1 975 94 .;locus=RLOC_00010338
Chr1	stalkie_big_nohaplotig	exon	114040236	114041218	99	-	.	Parent=FBgn0004170.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	114040236	114041117	.	-	0	Parent=FBgn0004170.1.mrna1
Chr1	gffcl	locus	114153948	114155821	.	+	.	ID=RLOC_00010339;geneIDs=FBgn0010019.1.path2;transcripts=FBgn0010019.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	114153948	114155821	.	+	.	ID=FBgn0010019.1.mrna2;geneID=FBgn0010019.1.path2;Name=FBgn0010019.1;Dir=sensecoverage=100.0;identity=99.2;matches=1652;mismatches=13;indels=0;unknowns=0;locus=RLOC_00010339
Chr1	stalkie_big_nohaplotig	exon	114153948	114154182	99	+	.	Parent=FBgn0010019.1.mrna2;Target=FBgn0010019.1 1 235 +
Chr1	stalkie_big_nohaplotig	exon	114154247	114154966	99	+	.	Parent=FBgn0010019.1.mrna2;Target=FBgn0010019.1 236 955 +
Chr1	stalkie_big_nohaplotig	exon	114155048	114155160	99	+	.	Parent=FBgn0010019.1.mrna2;Target=FBgn0010019.1 956 1068 +
Chr1	stalkie_big_nohaplotig	exon	114155225	114155821	98	+	.	Parent=FBgn0010019.1.mrna2;Target=FBgn0010019.1 1069 1665 +
Chr1	stalkie_big_nohaplotig	CDS	114153948	114154182	.	+	0	Parent=FBgn0010019.1.mrna2;Target=FBgn0010019.1 1 235 +
Chr1	stalkie_big_nohaplotig	CDS	114154247	114154966	.	+	2	Parent=FBgn0010019.1.mrna2;Target=FBgn0010019.1 236 955 +
Chr1	stalkie_big_nohaplotig	CDS	114155048	114155160	.	+	2	Parent=FBgn0010019.1.mrna2;Target=FBgn0010019.1 956 1068 +
Chr1	stalkie_big_nohaplotig	CDS	114155225	114155821	.	+	0	Parent=FBgn0010019.1.mrna2;Target=FBgn0010019.1 1069 1665 +
Chr1	gffcl	locus	114159361	114159968	.	+	.	ID=RLOC_00010340;geneIDs=comp130437_c0_seq1.path1;transcripts=comp130437_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114159361	114159968	.	+	.	ID=comp130437_c0_seq1.mrna1;geneID=comp130437_c0_seq1.path1;Name=comp130437_c0_seq1;Dir=indeterminatecoverage=99.7;identity=96.1;matches=584;mismatches=21;indels=3;unknowns=0;Target=comp130437_c0_seq1 605 1 .;CDS_Target=comp130437_c0_seq1 80 3 .;locus=RLOC_00010340
Chr1	stalkie_big_nohaplotig	exon	114159361	114159968	96	+	.	Parent=comp130437_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	114159363	114159440	.	+	0	Parent=comp130437_c0_seq1.mrna1
Chr1	gffcl	locus	114160207	114163192	.	.	.	ID=RLOC_00010341;geneIDs=FBgn0010019.2.path1,comp154077_c0_seq1.path1;transcripts=FBgn0010019.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114160207	114162151	.	+	.	ID=FBgn0010019.2.mrna1;geneID=FBgn0010019.2.path1;Name=FBgn0010019.2;Dir=sensecoverage=99.9;identity=92.4;matches=1541;mismatches=126;indels=0;unknowns=0;locus=RLOC_00010341
Chr1	stalkie_big_nohaplotig	exon	114160207	114160462	100	+	.	Parent=FBgn0010019.2.mrna1;Target=FBgn0010019.2 1 256 +
Chr1	stalkie_big_nohaplotig	exon	114160560	114161273	92	+	.	Parent=FBgn0010019.2.mrna1;Target=FBgn0010019.2 257 970 +
Chr1	stalkie_big_nohaplotig	exon	114161332	114161444	93	+	.	Parent=FBgn0010019.2.mrna1;Target=FBgn0010019.2 971 1083 +
Chr1	stalkie_big_nohaplotig	exon	114161505	114161931	89	+	.	Parent=FBgn0010019.2.mrna1;Target=FBgn0010019.2 1084 1510 +
Chr1	stalkie_big_nohaplotig	exon	114161995	114162151	87	+	.	Parent=FBgn0010019.2.mrna1;Target=FBgn0010019.2 1511 1667 +
Chr1	stalkie_big_nohaplotig	CDS	114160207	114160462	.	+	0	Parent=FBgn0010019.2.mrna1;Target=FBgn0010019.2 1 256 +
Chr1	stalkie_big_nohaplotig	CDS	114160560	114161273	.	+	2	Parent=FBgn0010019.2.mrna1;Target=FBgn0010019.2 257 970 +
Chr1	stalkie_big_nohaplotig	CDS	114161332	114161444	.	+	2	Parent=FBgn0010019.2.mrna1;Target=FBgn0010019.2 971 1083 +
Chr1	stalkie_big_nohaplotig	CDS	114161505	114161931	.	+	0	Parent=FBgn0010019.2.mrna1;Target=FBgn0010019.2 1084 1510 +
Chr1	stalkie_big_nohaplotig	CDS	114161995	114162149	.	+	2	Parent=FBgn0010019.2.mrna1;Target=FBgn0010019.2 1511 1665 +
Chr1	gffcl	locus	114187182	114188669	.	-	.	ID=RLOC_00010342;geneIDs=FBgn0000137.1.path1;transcripts=FBgn0000137.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114187182	114188669	.	-	.	ID=FBgn0000137.1.mrna1;geneID=FBgn0000137.1.path1;Name=FBgn0000137.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1487;mismatches=1;indels=0;unknowns=0;Target=FBgn0000137.1 1488 1 .;locus=RLOC_00010342
Chr1	stalkie_big_nohaplotig	exon	114187182	114188669	99	-	.	Parent=FBgn0000137.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	114187182	114188669	.	-	0	Parent=FBgn0000137.1.mrna1
Chr1	gffcl	locus	114299211	114299639	.	-	.	ID=RLOC_00010343;geneIDs=comp123581_c0_seq1.path3;transcripts=comp123581_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	114299211	114299639	.	-	.	ID=comp123581_c0_seq1.mrna3;geneID=comp123581_c0_seq1.path3;Name=comp123581_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=232;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010343
Chr1	stalkie_big_nohaplotig	exon	114299211	114299344	98	-	.	Parent=comp123581_c0_seq1.mrna3;Target=comp123581_c0_seq1 237 104 .
Chr1	stalkie_big_nohaplotig	exon	114299537	114299639	97	-	.	Parent=comp123581_c0_seq1.mrna3;Target=comp123581_c0_seq1 103 1 .
Chr1	stalkie_big_nohaplotig	CDS	114299306	114299344	.	-	0	Parent=comp123581_c0_seq1.mrna3;Target=comp123581_c0_seq1 142 104 .
Chr1	stalkie_big_nohaplotig	CDS	114299537	114299581	.	-	0	Parent=comp123581_c0_seq1.mrna3;Target=comp123581_c0_seq1 103 59 .
Chr1	gffcl	locus	114303873	114305745	.	-	.	ID=RLOC_00010344;geneIDs=FBgn0010019.1.path1;transcripts=FBgn0010019.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114303873	114305745	.	-	.	ID=FBgn0010019.1.mrna1;geneID=FBgn0010019.1.path1;Name=FBgn0010019.1;Dir=sensecoverage=100.0;identity=99.4;matches=1655;mismatches=10;indels=0;unknowns=0;locus=RLOC_00010344
Chr1	stalkie_big_nohaplotig	exon	114303873	114304469	99	-	.	Parent=FBgn0010019.1.mrna1;Target=FBgn0010019.1 1069 1665 +
Chr1	stalkie_big_nohaplotig	exon	114304533	114304645	98	-	.	Parent=FBgn0010019.1.mrna1;Target=FBgn0010019.1 956 1068 +
Chr1	stalkie_big_nohaplotig	exon	114304727	114305446	99	-	.	Parent=FBgn0010019.1.mrna1;Target=FBgn0010019.1 236 955 +
Chr1	stalkie_big_nohaplotig	exon	114305511	114305745	99	-	.	Parent=FBgn0010019.1.mrna1;Target=FBgn0010019.1 1 235 +
Chr1	stalkie_big_nohaplotig	CDS	114303873	114304469	.	-	0	Parent=FBgn0010019.1.mrna1;Target=FBgn0010019.1 1069 1665 +
Chr1	stalkie_big_nohaplotig	CDS	114304533	114304645	.	-	2	Parent=FBgn0010019.1.mrna1;Target=FBgn0010019.1 956 1068 +
Chr1	stalkie_big_nohaplotig	CDS	114304727	114305446	.	-	2	Parent=FBgn0010019.1.mrna1;Target=FBgn0010019.1 236 955 +
Chr1	stalkie_big_nohaplotig	CDS	114305511	114305745	.	-	0	Parent=FBgn0010019.1.mrna1;Target=FBgn0010019.1 1 235 +
Chr1	gffcl	locus	114313677	114314405	.	-	.	ID=RLOC_00010345;geneIDs=FBgn0029925.1.path1;transcripts=FBgn0029925.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114313677	114314405	.	-	.	ID=FBgn0029925.1.mrna1;geneID=FBgn0029925.1.path1;Name=FBgn0029925.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=729;mismatches=0;indels=0;unknowns=0;Target=FBgn0029925.1 729 1 .;locus=RLOC_00010345
Chr1	stalkie_big_nohaplotig	exon	114313677	114314405	100	-	.	Parent=FBgn0029925.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	114313677	114314405	.	-	0	Parent=FBgn0029925.1.mrna1
Chr1	gffcl	locus	114318547	114326081	.	-	.	ID=RLOC_00010346;geneIDs=FBgn0000146.1.path1,comp120051_c0_seq1.path1;transcripts=FBgn0000146.1.mrna1,comp120051_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114318547	114324870	.	-	.	ID=FBgn0000146.1.mrna1;geneID=FBgn0000146.1.path1;Name=FBgn0000146.1;Dir=sensecoverage=100.0;identity=99.2;matches=2723;mismatches=10;indels=12;unknowns=0;locus=RLOC_00010346
Chr1	stalkie_big_nohaplotig	exon	114318547	114319441	100	-	.	Parent=FBgn0000146.1.mrna1;Target=FBgn0000146.1 1848 2742 +
Chr1	stalkie_big_nohaplotig	exon	114319502	114319612	100	-	.	Parent=FBgn0000146.1.mrna1;Target=FBgn0000146.1 1737 1847 +
Chr1	stalkie_big_nohaplotig	exon	114321119	114321508	99	-	.	Parent=FBgn0000146.1.mrna1;Target=FBgn0000146.1 1347 1736 +
Chr1	stalkie_big_nohaplotig	exon	114321574	114321728	100	-	.	Parent=FBgn0000146.1.mrna1;Target=FBgn0000146.1 1192 1346 +
Chr1	stalkie_big_nohaplotig	exon	114323295	114323422	100	-	.	Parent=FBgn0000146.1.mrna1;Target=FBgn0000146.1 1064 1191 +
Chr1	stalkie_big_nohaplotig	exon	114323514	114323706	98	-	.	Parent=FBgn0000146.1.mrna1;Target=FBgn0000146.1 871 1063 +
Chr1	stalkie_big_nohaplotig	exon	114323781	114324283	99	-	.	Parent=FBgn0000146.1.mrna1;Target=FBgn0000146.1 368 870 +
Chr1	stalkie_big_nohaplotig	exon	114324362	114324421	98	-	.	Parent=FBgn0000146.1.mrna1;Target=FBgn0000146.1 308 367 +
Chr1	stalkie_big_nohaplotig	exon	114324481	114324559	100	-	.	Parent=FBgn0000146.1.mrna1;Target=FBgn0000146.1 229 307 +
Chr1	stalkie_big_nohaplotig	exon	114324649	114324870	93	-	.	Parent=FBgn0000146.1.mrna1;Target=FBgn0000146.1 1 228 +
Chr1	stalkie_big_nohaplotig	CDS	114318547	114319441	.	-	1	Parent=FBgn0000146.1.mrna1;Target=FBgn0000146.1 1848 2742 +
Chr1	stalkie_big_nohaplotig	CDS	114319502	114319612	.	-	1	Parent=FBgn0000146.1.mrna1;Target=FBgn0000146.1 1737 1847 +
Chr1	stalkie_big_nohaplotig	CDS	114321119	114321508	.	-	1	Parent=FBgn0000146.1.mrna1;Target=FBgn0000146.1 1347 1736 +
Chr1	stalkie_big_nohaplotig	CDS	114321574	114321728	.	-	0	Parent=FBgn0000146.1.mrna1;Target=FBgn0000146.1 1192 1346 +
Chr1	stalkie_big_nohaplotig	CDS	114323295	114323422	.	-	2	Parent=FBgn0000146.1.mrna1;Target=FBgn0000146.1 1064 1191 +
Chr1	stalkie_big_nohaplotig	CDS	114323514	114323706	.	-	0	Parent=FBgn0000146.1.mrna1;Target=FBgn0000146.1 871 1063 +
Chr1	stalkie_big_nohaplotig	CDS	114323781	114324283	.	-	2	Parent=FBgn0000146.1.mrna1;Target=FBgn0000146.1 368 870 +
Chr1	stalkie_big_nohaplotig	CDS	114324362	114324421	.	-	2	Parent=FBgn0000146.1.mrna1;Target=FBgn0000146.1 308 367 +
Chr1	stalkie_big_nohaplotig	CDS	114324481	114324559	.	-	0	Parent=FBgn0000146.1.mrna1;Target=FBgn0000146.1 229 307 +
Chr1	stalkie_big_nohaplotig	CDS	114324649	114324870	.	-	0	Parent=FBgn0000146.1.mrna1;Target=FBgn0000146.1 1 228 +
Chr1	stalkie_big_nohaplotig	mRNA	114324838	114326081	.	-	.	ID=comp120051_c0_seq1.mrna1;geneID=comp120051_c0_seq1.path1;Name=comp120051_c0_seq1;Dir=sensecoverage=100.0;identity=97.5;matches=269;mismatches=4;indels=3;unknowns=0;Target=comp120051_c0_seq1 139 273 +;locus=RLOC_00010346
Chr1	stalkie_big_nohaplotig	exon	114324838	114324993	95	-	.	Parent=comp120051_c0_seq1.mrna1;Target=comp120051_c0_seq1 121 273 +
Chr1	stalkie_big_nohaplotig	exon	114325962	114326081	100	-	.	Parent=comp120051_c0_seq1.mrna1;Target=comp120051_c0_seq1 1 120 +
Chr1	stalkie_big_nohaplotig	CDS	114324838	114324975	.	-	0	Parent=comp120051_c0_seq1.mrna1
Chr1	gffcl	locus	114322632	114323068	.	-	.	ID=RLOC_00010347;geneIDs=comp150537_c0_seq1.path1;transcripts=comp150537_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114322632	114323068	.	-	.	ID=comp150537_c0_seq1.mrna1;geneID=comp150537_c0_seq1.path1;Name=comp150537_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=432;mismatches=4;indels=1;unknowns=0;Target=comp150537_c0_seq1 436 1 .;CDS_Target=comp150537_c0_seq1 310 143 .;locus=RLOC_00010347
Chr1	stalkie_big_nohaplotig	exon	114322632	114323068	98	-	.	Parent=comp150537_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	114322758	114322925	.	-	0	Parent=comp150537_c0_seq1.mrna1
Chr1	gffcl	locus	114329156	114351290	.	+	.	ID=RLOC_00010348;geneIDs=FBgn0000330.1.path1;transcripts=FBgn0000330.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114329156	114351290	.	+	.	ID=FBgn0000330.1.mrna1;geneID=FBgn0000330.1.path1;Name=FBgn0000330.1;Dir=sensecoverage=100.0;identity=99.8;matches=1252;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010348
Chr1	stalkie_big_nohaplotig	exon	114329156	114329199	100	+	.	Parent=FBgn0000330.1.mrna1;Target=FBgn0000330.1 1 44 +
Chr1	stalkie_big_nohaplotig	exon	114329253	114329340	98	+	.	Parent=FBgn0000330.1.mrna1;Target=FBgn0000330.1 45 132 +
Chr1	stalkie_big_nohaplotig	exon	114329411	114329500	100	+	.	Parent=FBgn0000330.1.mrna1;Target=FBgn0000330.1 133 222 +
Chr1	stalkie_big_nohaplotig	exon	114350058	114350293	99	+	.	Parent=FBgn0000330.1.mrna1;Target=FBgn0000330.1 223 458 +
Chr1	stalkie_big_nohaplotig	exon	114350371	114350530	100	+	.	Parent=FBgn0000330.1.mrna1;Target=FBgn0000330.1 459 618 +
Chr1	stalkie_big_nohaplotig	exon	114350591	114351043	100	+	.	Parent=FBgn0000330.1.mrna1;Target=FBgn0000330.1 619 1071 +
Chr1	stalkie_big_nohaplotig	exon	114351108	114351290	100	+	.	Parent=FBgn0000330.1.mrna1;Target=FBgn0000330.1 1072 1254 +
Chr1	stalkie_big_nohaplotig	CDS	114329156	114329199	.	+	0	Parent=FBgn0000330.1.mrna1;Target=FBgn0000330.1 1 44 +
Chr1	stalkie_big_nohaplotig	CDS	114329253	114329340	.	+	1	Parent=FBgn0000330.1.mrna1;Target=FBgn0000330.1 45 132 +
Chr1	stalkie_big_nohaplotig	CDS	114329411	114329500	.	+	0	Parent=FBgn0000330.1.mrna1;Target=FBgn0000330.1 133 222 +
Chr1	stalkie_big_nohaplotig	CDS	114350058	114350293	.	+	0	Parent=FBgn0000330.1.mrna1;Target=FBgn0000330.1 223 458 +
Chr1	stalkie_big_nohaplotig	CDS	114350371	114350530	.	+	1	Parent=FBgn0000330.1.mrna1;Target=FBgn0000330.1 459 618 +
Chr1	stalkie_big_nohaplotig	CDS	114350591	114351043	.	+	0	Parent=FBgn0000330.1.mrna1;Target=FBgn0000330.1 619 1071 +
Chr1	stalkie_big_nohaplotig	CDS	114351108	114351290	.	+	0	Parent=FBgn0000330.1.mrna1;Target=FBgn0000330.1 1072 1254 +
Chr1	gffcl	locus	114340144	114340624	.	+	.	ID=RLOC_00010349;geneIDs=comp586139_c0_seq1.path1;transcripts=comp586139_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114340144	114340624	.	+	.	ID=comp586139_c0_seq1.mrna1;geneID=comp586139_c0_seq1.path1;Name=comp586139_c0_seq1;Dir=indeterminatecoverage=96.2;identity=99.6;matches=479;mismatches=2;indels=0;unknowns=0;Target=comp586139_c0_seq1 495 15 .;CDS_Target=comp586139_c0_seq1 395 264 .;locus=RLOC_00010349
Chr1	stalkie_big_nohaplotig	exon	114340144	114340624	99	+	.	Parent=comp586139_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	114340393	114340524	.	+	0	Parent=comp586139_c0_seq1.mrna1
Chr1	gffcl	locus	114362948	114363428	.	+	.	ID=RLOC_00010350;geneIDs=comp586139_c0_seq1.path2;transcripts=comp586139_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	114362948	114363428	.	+	.	ID=comp586139_c0_seq1.mrna2;geneID=comp586139_c0_seq1.path2;Name=comp586139_c0_seq1;Dir=indeterminatecoverage=96.2;identity=99.6;matches=479;mismatches=2;indels=0;unknowns=0;Target=comp586139_c0_seq1 495 15 .;CDS_Target=comp586139_c0_seq1 395 264 .;locus=RLOC_00010350
Chr1	stalkie_big_nohaplotig	exon	114362948	114363428	99	+	.	Parent=comp586139_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	114363197	114363328	.	+	0	Parent=comp586139_c0_seq1.mrna2
Chr1	gffcl	locus	114446164	114450104	.	+	.	ID=RLOC_00010353;geneIDs=FBgn0027106.1.path1;transcripts=FBgn0027106.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114446164	114450104	.	+	.	ID=FBgn0027106.1.mrna1;geneID=FBgn0027106.1.path1;Name=FBgn0027106.1;Dir=sensecoverage=100.0;identity=99.4;matches=1255;mismatches=8;indels=0;unknowns=0;locus=RLOC_00010353
Chr1	stalkie_big_nohaplotig	exon	114446164	114446406	100	+	.	Parent=FBgn0027106.1.mrna1;Target=FBgn0027106.1 1 243 +
Chr1	stalkie_big_nohaplotig	exon	114446491	114446671	98	+	.	Parent=FBgn0027106.1.mrna1;Target=FBgn0027106.1 244 424 +
Chr1	stalkie_big_nohaplotig	exon	114449207	114449738	99	+	.	Parent=FBgn0027106.1.mrna1;Target=FBgn0027106.1 425 956 +
Chr1	stalkie_big_nohaplotig	exon	114449798	114450104	99	+	.	Parent=FBgn0027106.1.mrna1;Target=FBgn0027106.1 957 1263 +
Chr1	stalkie_big_nohaplotig	CDS	114446164	114446406	.	+	0	Parent=FBgn0027106.1.mrna1;Target=FBgn0027106.1 1 243 +
Chr1	stalkie_big_nohaplotig	CDS	114446491	114446671	.	+	0	Parent=FBgn0027106.1.mrna1;Target=FBgn0027106.1 244 424 +
Chr1	stalkie_big_nohaplotig	CDS	114449207	114449738	.	+	2	Parent=FBgn0027106.1.mrna1;Target=FBgn0027106.1 425 956 +
Chr1	stalkie_big_nohaplotig	CDS	114449798	114450104	.	+	1	Parent=FBgn0027106.1.mrna1;Target=FBgn0027106.1 957 1263 +
Chr1	gffcl	locus	114458899	114460209	.	-	.	ID=RLOC_00010354;geneIDs=FBgn0086693.path1;transcripts=FBgn0086693.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114458899	114460209	.	-	.	ID=FBgn0086693.mrna1;geneID=FBgn0086693.path1;Name=FBgn0086693;Dir=sensecoverage=100.0;identity=98.8;matches=978;mismatches=12;indels=0;unknowns=0;locus=RLOC_00010354
Chr1	stalkie_big_nohaplotig	exon	114458899	114459064	98	-	.	Parent=FBgn0086693.mrna1;Target=FBgn0086693 825 990 +
Chr1	stalkie_big_nohaplotig	exon	114459275	114459480	100	-	.	Parent=FBgn0086693.mrna1;Target=FBgn0086693 619 824 +
Chr1	stalkie_big_nohaplotig	exon	114459592	114460209	98	-	.	Parent=FBgn0086693.mrna1;Target=FBgn0086693 1 618 +
Chr1	stalkie_big_nohaplotig	CDS	114458899	114459064	.	-	1	Parent=FBgn0086693.mrna1;Target=FBgn0086693 825 990 +
Chr1	stalkie_big_nohaplotig	CDS	114459275	114459480	.	-	0	Parent=FBgn0086693.mrna1;Target=FBgn0086693 619 824 +
Chr1	stalkie_big_nohaplotig	CDS	114459592	114460209	.	-	0	Parent=FBgn0086693.mrna1;Target=FBgn0086693 1 618 +
Chr1	gffcl	locus	114474508	114474993	.	-	.	ID=RLOC_00010355;geneIDs=FBgn0261284.1.path1;transcripts=FBgn0261284.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114474508	114474993	.	-	.	ID=FBgn0261284.1.mrna1;geneID=FBgn0261284.1.path1;Name=FBgn0261284.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=486;mismatches=0;indels=0;unknowns=0;Target=FBgn0261284.1 486 1 .;locus=RLOC_00010355
Chr1	stalkie_big_nohaplotig	exon	114474508	114474993	100	-	.	Parent=FBgn0261284.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	114474508	114474993	.	-	0	Parent=FBgn0261284.1.mrna1
Chr1	gffcl	locus	114484679	114485188	.	+	.	ID=RLOC_00010356;geneIDs=comp138902_c0_seq1.path1;transcripts=comp138902_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114484679	114485188	.	+	.	ID=comp138902_c0_seq1.mrna1;geneID=comp138902_c0_seq1.path1;Name=comp138902_c0_seq1;Dir=indeterminatecoverage=98.6;identity=99.8;matches=509;mismatches=1;indels=0;unknowns=0;Target=comp138902_c0_seq1 517 8 .;CDS_Target=comp138902_c0_seq1 421 107 .;locus=RLOC_00010356
Chr1	stalkie_big_nohaplotig	exon	114484679	114485188	99	+	.	Parent=comp138902_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	114484778	114485092	.	+	0	Parent=comp138902_c0_seq1.mrna1
Chr1	gffcl	locus	114495584	114496275	.	-	.	ID=RLOC_00010357;geneIDs=comp150761_c0_seq1.path1;transcripts=comp150761_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114495584	114496275	.	-	.	ID=comp150761_c0_seq1.mrna1;geneID=comp150761_c0_seq1.path1;Name=comp150761_c0_seq1;Dir=sensecoverage=95.9;identity=100.0;matches=566;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010357
Chr1	stalkie_big_nohaplotig	exon	114495584	114495838	100	-	.	Parent=comp150761_c0_seq1.mrna1;Target=comp150761_c0_seq1 336 590 +
Chr1	stalkie_big_nohaplotig	exon	114495900	114496057	100	-	.	Parent=comp150761_c0_seq1.mrna1;Target=comp150761_c0_seq1 178 335 +
Chr1	stalkie_big_nohaplotig	exon	114496123	114496275	100	-	.	Parent=comp150761_c0_seq1.mrna1;Target=comp150761_c0_seq1 25 177 +
Chr1	stalkie_big_nohaplotig	CDS	114495715	114495838	.	-	1	Parent=comp150761_c0_seq1.mrna1;Target=comp150761_c0_seq1 336 459 +
Chr1	stalkie_big_nohaplotig	CDS	114495900	114496057	.	-	0	Parent=comp150761_c0_seq1.mrna1;Target=comp150761_c0_seq1 178 335 +
Chr1	stalkie_big_nohaplotig	CDS	114496123	114496206	.	-	0	Parent=comp150761_c0_seq1.mrna1;Target=comp150761_c0_seq1 94 177 +
Chr1	gffcl	locus	114505200	114515699	.	+	.	ID=RLOC_00010358;geneIDs=FBgn0004646.1.path1;transcripts=FBgn0004646.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114505200	114515699	.	+	.	ID=FBgn0004646.1.mrna1;geneID=FBgn0004646.1.path1;Name=FBgn0004646.1;Dir=sensecoverage=100.0;identity=99.7;matches=1146;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010358
Chr1	stalkie_big_nohaplotig	exon	114505200	114505475	99	+	.	Parent=FBgn0004646.1.mrna1;Target=FBgn0004646.1 1 276 +
Chr1	stalkie_big_nohaplotig	exon	114510272	114510379	100	+	.	Parent=FBgn0004646.1.mrna1;Target=FBgn0004646.1 277 384 +
Chr1	stalkie_big_nohaplotig	exon	114514800	114514955	100	+	.	Parent=FBgn0004646.1.mrna1;Target=FBgn0004646.1 385 540 +
Chr1	stalkie_big_nohaplotig	exon	114515026	114515378	99	+	.	Parent=FBgn0004646.1.mrna1;Target=FBgn0004646.1 541 893 +
Chr1	stalkie_big_nohaplotig	exon	114515444	114515699	100	+	.	Parent=FBgn0004646.1.mrna1;Target=FBgn0004646.1 894 1149 +
Chr1	stalkie_big_nohaplotig	CDS	114505200	114505475	.	+	0	Parent=FBgn0004646.1.mrna1;Target=FBgn0004646.1 1 276 +
Chr1	stalkie_big_nohaplotig	CDS	114510272	114510379	.	+	0	Parent=FBgn0004646.1.mrna1;Target=FBgn0004646.1 277 384 +
Chr1	stalkie_big_nohaplotig	CDS	114514800	114514955	.	+	0	Parent=FBgn0004646.1.mrna1;Target=FBgn0004646.1 385 540 +
Chr1	stalkie_big_nohaplotig	CDS	114515026	114515378	.	+	0	Parent=FBgn0004646.1.mrna1;Target=FBgn0004646.1 541 893 +
Chr1	stalkie_big_nohaplotig	CDS	114515444	114515699	.	+	1	Parent=FBgn0004646.1.mrna1;Target=FBgn0004646.1 894 1149 +
Chr1	gffcl	locus	114515711	114515757	.	+	.	ID=RLOC_00010359;geneIDs=comp163107_c1_seq1.path1;transcripts=comp163107_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114515711	114515757	.	+	.	ID=comp163107_c1_seq1.mrna1;geneID=comp163107_c1_seq1.path1;Name=comp163107_c1_seq1;Dir=indeterminatecoverage=0.8;identity=97.9;matches=46;mismatches=1;indels=0;unknowns=0;Target=comp163107_c1_seq1 47 1 .;locus=RLOC_00010359
Chr1	stalkie_big_nohaplotig	exon	114515711	114515757	97	+	.	Parent=comp163107_c1_seq1.mrna1
Chr1	gffcl	locus	114520979	114521662	.	-	.	ID=RLOC_00010360;geneIDs=FBgn0039966.1.path1;transcripts=FBgn0039966.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114520979	114521662	.	-	.	ID=FBgn0039966.1.mrna1;geneID=FBgn0039966.1.path1;Name=FBgn0039966.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=680;mismatches=4;indels=0;unknowns=0;Target=FBgn0039966.1 684 1 .;locus=RLOC_00010360
Chr1	stalkie_big_nohaplotig	exon	114520979	114521662	99	-	.	Parent=FBgn0039966.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	114520979	114521662	.	-	0	Parent=FBgn0039966.1.mrna1
Chr1	gffcl	locus	114522501	114525398	.	+	.	ID=RLOC_00010361;geneIDs=comp162899_c1_seq1.path1;transcripts=comp162899_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114522501	114525398	.	+	.	ID=comp162899_c1_seq1.mrna1;geneID=comp162899_c1_seq1.path1;Name=comp162899_c1_seq1;Dir=antisensecoverage=100.0;identity=95.5;matches=1767;mismatches=48;indels=35;unknowns=0;Target=comp162899_c1_seq1 1053 1193 .;locus=RLOC_00010361
Chr1	stalkie_big_nohaplotig	exon	114522501	114523115	97	+	.	Parent=comp162899_c1_seq1.mrna1;Target=comp162899_c1_seq1 1212 1824 -
Chr1	stalkie_big_nohaplotig	exon	114524103	114524751	94	+	.	Parent=comp162899_c1_seq1.mrna1;Target=comp162899_c1_seq1 573 1211 -
Chr1	stalkie_big_nohaplotig	exon	114524822	114525398	94	+	.	Parent=comp162899_c1_seq1.mrna1;Target=comp162899_c1_seq1 1 572 -
Chr1	stalkie_big_nohaplotig	CDS	114524121	114524261	.	+	0	Parent=comp162899_c1_seq1.mrna1
Chr1	gffcl	locus	114527479	114528173	.	-	.	ID=RLOC_00010362;geneIDs=FBgn0037685.path1;transcripts=FBgn0037685.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114527479	114528173	.	-	.	ID=FBgn0037685.mrna1;geneID=FBgn0037685.path1;Name=FBgn0037685;Dir=sensecoverage=98.6;identity=99.8;matches=413;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010362
Chr1	stalkie_big_nohaplotig	exon	114527479	114527529	100	-	.	Parent=FBgn0037685.mrna1;Target=FBgn0037685 370 420 +
Chr1	stalkie_big_nohaplotig	exon	114527605	114527760	100	-	.	Parent=FBgn0037685.mrna1;Target=FBgn0037685 214 369 +
Chr1	stalkie_big_nohaplotig	exon	114527967	114528173	99	-	.	Parent=FBgn0037685.mrna1;Target=FBgn0037685 7 213 +
Chr1	stalkie_big_nohaplotig	CDS	114527479	114527529	.	-	0	Parent=FBgn0037685.mrna1;Target=FBgn0037685 370 420 +
Chr1	stalkie_big_nohaplotig	CDS	114527605	114527760	.	-	0	Parent=FBgn0037685.mrna1;Target=FBgn0037685 214 369 +
Chr1	stalkie_big_nohaplotig	CDS	114527967	114528173	.	-	0	Parent=FBgn0037685.mrna1;Target=FBgn0037685 7 213 +
Chr1	gffcl	locus	114536382	114549261	.	+	.	ID=RLOC_00010363;geneIDs=FBgn0027335.1.path1,comp151831_c0_seq1.path1;transcripts=FBgn0027335.1.mrna1,comp151831_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114536382	114549261	.	+	.	ID=FBgn0027335.1.mrna1;geneID=FBgn0027335.1.path1;Name=FBgn0027335.1;Dir=sensecoverage=99.8;identity=99.7;matches=1194;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010363
Chr1	stalkie_big_nohaplotig	exon	114536382	114536416	100	+	.	Parent=FBgn0027335.1.mrna1;Target=FBgn0027335.1 3 37 +
Chr1	stalkie_big_nohaplotig	exon	114544354	114544498	100	+	.	Parent=FBgn0027335.1.mrna1;Target=FBgn0027335.1 38 182 +
Chr1	stalkie_big_nohaplotig	exon	114544557	114545212	99	+	.	Parent=FBgn0027335.1.mrna1;Target=FBgn0027335.1 183 838 +
Chr1	stalkie_big_nohaplotig	exon	114546752	114546894	98	+	.	Parent=FBgn0027335.1.mrna1;Target=FBgn0027335.1 839 981 +
Chr1	stalkie_big_nohaplotig	exon	114546957	114547117	99	+	.	Parent=FBgn0027335.1.mrna1;Target=FBgn0027335.1 982 1142 +
Chr1	stalkie_big_nohaplotig	exon	114549204	114549261	100	+	.	Parent=FBgn0027335.1.mrna1;Target=FBgn0027335.1 1143 1200 +
Chr1	stalkie_big_nohaplotig	CDS	114536383	114536416	.	+	0	Parent=FBgn0027335.1.mrna1;Target=FBgn0027335.1 4 37 +
Chr1	stalkie_big_nohaplotig	CDS	114544354	114544498	.	+	2	Parent=FBgn0027335.1.mrna1;Target=FBgn0027335.1 38 182 +
Chr1	stalkie_big_nohaplotig	CDS	114544557	114545212	.	+	1	Parent=FBgn0027335.1.mrna1;Target=FBgn0027335.1 183 838 +
Chr1	stalkie_big_nohaplotig	CDS	114546752	114546894	.	+	2	Parent=FBgn0027335.1.mrna1;Target=FBgn0027335.1 839 981 +
Chr1	stalkie_big_nohaplotig	CDS	114546957	114547117	.	+	0	Parent=FBgn0027335.1.mrna1;Target=FBgn0027335.1 982 1142 +
Chr1	stalkie_big_nohaplotig	CDS	114549204	114549261	.	+	1	Parent=FBgn0027335.1.mrna1;Target=FBgn0027335.1 1143 1200 +
Chr1	stalkie_big_nohaplotig	mRNA	114548310	114549224	.	+	.	ID=comp151831_c0_seq1.mrna1;geneID=comp151831_c0_seq1.path1;Name=comp151831_c0_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=715;mismatches=4;indels=0;unknowns=0;Target=comp151831_c0_seq1 293 403 +;locus=RLOC_00010363
Chr1	stalkie_big_nohaplotig	exon	114548310	114548826	99	+	.	Parent=comp151831_c0_seq1.mrna1;Target=comp151831_c0_seq1 1 517 +
Chr1	stalkie_big_nohaplotig	exon	114549023	114549224	100	+	.	Parent=comp151831_c0_seq1.mrna1;Target=comp151831_c0_seq1 518 719 +
Chr1	stalkie_big_nohaplotig	CDS	114548602	114548712	.	+	0	Parent=comp151831_c0_seq1.mrna1
Chr1	gffcl	locus	114547436	114548287	.	+	.	ID=RLOC_00010364;geneIDs=comp160778_c0_seq1.path1;transcripts=comp160778_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114547436	114548287	.	+	.	ID=comp160778_c0_seq1.mrna1;geneID=comp160778_c0_seq1.path1;Name=comp160778_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.3;matches=824;mismatches=27;indels=5;unknowns=0;Target=comp160778_c0_seq1 855 1 .;CDS_Target=comp160778_c0_seq1 678 496 .;locus=RLOC_00010364
Chr1	stalkie_big_nohaplotig	exon	114547436	114548287	96	+	.	Parent=comp160778_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	114547927	114548109	.	+	0	Parent=comp160778_c0_seq1.mrna1
Chr1	gffcl	locus	114564590	114564820	.	+	.	ID=RLOC_00010365;geneIDs=comp159723_c0_seq1.path2;transcripts=comp159723_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	114564590	114564820	.	+	.	ID=comp159723_c0_seq1.mrna2;geneID=comp159723_c0_seq1.path2;Name=comp159723_c0_seq1;Dir=indeterminatecoverage=6.8;identity=99.1;matches=229;mismatches=0;indels=2;unknowns=0;Target=comp159723_c0_seq1 3375 3147 .;locus=RLOC_00010365
Chr1	stalkie_big_nohaplotig	exon	114564590	114564820	99	+	.	Parent=comp159723_c0_seq1.mrna2
Chr1	gffcl	locus	114569249	114570521	.	-	.	ID=RLOC_00010366;geneIDs=comp139510_c0_seq1.path1;transcripts=comp139510_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114569249	114570521	.	-	.	ID=comp139510_c0_seq1.mrna1;geneID=comp139510_c0_seq1.path1;Name=comp139510_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=1255;mismatches=8;indels=28;unknowns=0;Target=comp139510_c0_seq1 1281 1 .;CDS_Target=comp139510_c0_seq1 602 375 .;locus=RLOC_00010366
Chr1	stalkie_big_nohaplotig	exon	114569249	114570521	97	-	.	Parent=comp139510_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	114569910	114570147	.	-	0	Parent=comp139510_c0_seq1.mrna1
Chr1	gffcl	locus	114572245	114573185	.	+	.	ID=RLOC_00010367;geneIDs=comp151894_c0_seq1.path1;transcripts=comp151894_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114572245	114573185	.	+	.	ID=comp151894_c0_seq1.mrna1;geneID=comp151894_c0_seq1.path1;Name=comp151894_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=940;mismatches=1;indels=1;unknowns=0;Target=comp151894_c0_seq1 942 1 .;CDS_Target=comp151894_c0_seq1 368 255 .;locus=RLOC_00010367
Chr1	stalkie_big_nohaplotig	exon	114572245	114573185	99	+	.	Parent=comp151894_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	114572499	114572612	.	+	0	Parent=comp151894_c0_seq1.mrna1
Chr1	gffcl	locus	114573506	114581581	.	+	.	ID=RLOC_00010368;geneIDs=FBgn0044872.2.path1;transcripts=FBgn0044872.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114573506	114581581	.	+	.	ID=FBgn0044872.2.mrna1;geneID=FBgn0044872.2.path1;Name=FBgn0044872.2;Dir=sensecoverage=87.8;identity=98.8;matches=987;mismatches=5;indels=7;unknowns=0;locus=RLOC_00010368
Chr1	stalkie_big_nohaplotig	exon	114573506	114574362	99	+	.	Parent=FBgn0044872.2.mrna1;Target=FBgn0044872.2 1 857 +
Chr1	stalkie_big_nohaplotig	exon	114581238	114581336	93	+	.	Parent=FBgn0044872.2.mrna1;Target=FBgn0044872.2 858 951 +
Chr1	stalkie_big_nohaplotig	exon	114581475	114581500	92	+	.	Parent=FBgn0044872.2.mrna1;Target=FBgn0044872.2 1050 1073 +
Chr1	stalkie_big_nohaplotig	exon	114581565	114581581	100	+	.	Parent=FBgn0044872.2.mrna1;Target=FBgn0044872.2 1119 1135 +
Chr1	stalkie_big_nohaplotig	CDS	114573506	114574362	.	+	0	Parent=FBgn0044872.2.mrna1;Target=FBgn0044872.2 1 857 +
Chr1	stalkie_big_nohaplotig	CDS	114581238	114581336	.	+	1	Parent=FBgn0044872.2.mrna1;Target=FBgn0044872.2 858 951 +
Chr1	stalkie_big_nohaplotig	CDS	114581475	114581500	.	+	1	Parent=FBgn0044872.2.mrna1;Target=FBgn0044872.2 1050 1073 +
Chr1	stalkie_big_nohaplotig	CDS	114581565	114581581	.	+	2	Parent=FBgn0044872.2.mrna1;Target=FBgn0044872.2 1119 1135 +
Chr1	gffcl	locus	114588428	114591015	.	+	.	ID=RLOC_00010369;geneIDs=FBgn0016976.1.path1;transcripts=FBgn0016976.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114588428	114591015	.	+	.	ID=FBgn0016976.1.mrna1;geneID=FBgn0016976.1.path1;Name=FBgn0016976.1;Dir=sensecoverage=100.0;identity=99.9;matches=2530;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010369
Chr1	stalkie_big_nohaplotig	exon	114588428	114589700	99	+	.	Parent=FBgn0016976.1.mrna1;Target=FBgn0016976.1 1 1273 +
Chr1	stalkie_big_nohaplotig	exon	114589757	114591015	100	+	.	Parent=FBgn0016976.1.mrna1;Target=FBgn0016976.1 1274 2532 +
Chr1	stalkie_big_nohaplotig	CDS	114588428	114589700	.	+	0	Parent=FBgn0016976.1.mrna1;Target=FBgn0016976.1 1 1273 +
Chr1	stalkie_big_nohaplotig	CDS	114589757	114591015	.	+	2	Parent=FBgn0016976.1.mrna1;Target=FBgn0016976.1 1274 2532 +
Chr1	gffcl	locus	114591888	114595494	.	+	.	ID=RLOC_00010370;geneIDs=FBgn0016975.1.path1;transcripts=FBgn0016975.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114591888	114595494	.	+	.	ID=FBgn0016975.1.mrna1;geneID=FBgn0016975.1.path1;Name=FBgn0016975.1;Dir=sensecoverage=100.0;identity=99.9;matches=2915;mismatches=3;indels=1;unknowns=0;Target=FBgn0016975.1 3 125 +;locus=RLOC_00010370
Chr1	stalkie_big_nohaplotig	exon	114591888	114592778	99	+	.	Parent=FBgn0016975.1.mrna1;Target=FBgn0016975.1 1 892 +
Chr1	stalkie_big_nohaplotig	exon	114592834	114593910	99	+	.	Parent=FBgn0016975.1.mrna1;Target=FBgn0016975.1 893 1969 +
Chr1	stalkie_big_nohaplotig	exon	114593979	114594147	98	+	.	Parent=FBgn0016975.1.mrna1;Target=FBgn0016975.1 1970 2138 +
Chr1	stalkie_big_nohaplotig	exon	114594206	114594457	100	+	.	Parent=FBgn0016975.1.mrna1;Target=FBgn0016975.1 2139 2390 +
Chr1	stalkie_big_nohaplotig	exon	114594835	114595016	100	+	.	Parent=FBgn0016975.1.mrna1;Target=FBgn0016975.1 2391 2572 +
Chr1	stalkie_big_nohaplotig	exon	114595081	114595291	100	+	.	Parent=FBgn0016975.1.mrna1;Target=FBgn0016975.1 2573 2783 +
Chr1	stalkie_big_nohaplotig	exon	114595359	114595494	100	+	.	Parent=FBgn0016975.1.mrna1;Target=FBgn0016975.1 2784 2919 +
Chr1	stalkie_big_nohaplotig	CDS	114591890	114592011	.	+	0	Parent=FBgn0016975.1.mrna1
Chr1	gffcl	locus	114596808	114597516	.	+	.	ID=RLOC_00010371;geneIDs=comp150840_c0_seq1.path1;transcripts=comp150840_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114596808	114597516	.	+	.	ID=comp150840_c0_seq1.mrna1;geneID=comp150840_c0_seq1.path1;Name=comp150840_c0_seq1;Dir=indeterminatecoverage=91.7;identity=97.4;matches=683;mismatches=11;indels=7;unknowns=0;Target=comp150840_c0_seq1 366 289 .;locus=RLOC_00010371
Chr1	stalkie_big_nohaplotig	exon	114596808	114596884	92	+	.	Parent=comp150840_c0_seq1.mrna1;Target=comp150840_c0_seq1 137 67 .
Chr1	stalkie_big_nohaplotig	exon	114596894	114597516	98	+	.	Parent=comp150840_c0_seq1.mrna1;Target=comp150840_c0_seq1 792 169 .
Chr1	stalkie_big_nohaplotig	CDS	114597013	114597090	.	+	0	Parent=comp150840_c0_seq1.mrna1
Chr1	gffcl	locus	114598197	114599154	.	.	.	ID=RLOC_00010372;geneIDs=comp103659_c0_seq1.path1,comp154896_c0_seq1.path1;transcripts=comp154896_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114598403	114599154	.	+	.	ID=comp154896_c0_seq1.mrna1;geneID=comp154896_c0_seq1.path1;Name=comp154896_c0_seq1;Dir=indeterminatecoverage=97.9;identity=97.8;matches=742;mismatches=10;indels=7;unknowns=0;Target=comp154896_c0_seq1 775 17 .;CDS_Target=comp154896_c0_seq1 310 179 .;locus=RLOC_00010372
Chr1	stalkie_big_nohaplotig	exon	114598403	114599154	97	+	.	Parent=comp154896_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	114598565	114598696	.	+	0	Parent=comp154896_c0_seq1.mrna1
Chr1	gffcl	locus	114599318	114600071	.	-	.	ID=RLOC_00010373;geneIDs=comp158027_c0_seq1.path1;transcripts=comp158027_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114599318	114600071	.	-	.	ID=comp158027_c0_seq1.mrna1;geneID=comp158027_c0_seq1.path1;Name=comp158027_c0_seq1;Dir=indeterminatecoverage=96.3;identity=99.9;matches=753;mismatches=1;indels=0;unknowns=0;Target=comp158027_c0_seq1 783 30 .;CDS_Target=comp158027_c0_seq1 186 31 .;locus=RLOC_00010373
Chr1	stalkie_big_nohaplotig	exon	114599318	114600071	99	-	.	Parent=comp158027_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	114599915	114600070	.	-	0	Parent=comp158027_c0_seq1.mrna1
Chr1	gffcl	locus	114640399	114642649	.	.	.	ID=RLOC_00010375;geneIDs=FBgn0069973.2.path1,comp149742_c0_seq1.path1;transcripts=FBgn0069973.2.mrna1,comp149742_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114640399	114642649	.	+	.	ID=FBgn0069973.2.mrna1;geneID=FBgn0069973.2.path1;Name=FBgn0069973.2;Dir=indeterminatecoverage=100.0;identity=99.4;matches=781;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010375
Chr1	stalkie_big_nohaplotig	exon	114640399	114641019	99	+	.	Parent=FBgn0069973.2.mrna1;Target=FBgn0069973.2 621 1 .
Chr1	stalkie_big_nohaplotig	exon	114642485	114642649	100	+	.	Parent=FBgn0069973.2.mrna1;Target=FBgn0069973.2 786 622 .
Chr1	stalkie_big_nohaplotig	CDS	114640399	114641019	.	+	0	Parent=FBgn0069973.2.mrna1;Target=FBgn0069973.2 621 1 .
Chr1	stalkie_big_nohaplotig	CDS	114642485	114642649	.	+	0	Parent=FBgn0069973.2.mrna1;Target=FBgn0069973.2 786 622 .
Chr1	stalkie_big_nohaplotig	mRNA	114640997	114641418	.	-	.	ID=comp149742_c0_seq1.mrna1;geneID=comp149742_c0_seq1.path1;Name=comp149742_c0_seq1;Dir=indeterminatecoverage=97.5;identity=96.3;matches=411;mismatches=11;indels=5;unknowns=0;Target=comp149742_c0_seq1 438 12 .;CDS_Target=comp149742_c0_seq1 131 12 .;locus=RLOC_00010375
Chr1	stalkie_big_nohaplotig	exon	114640997	114641418	96	-	.	Parent=comp149742_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	114641304	114641418	.	-	0	Parent=comp149742_c0_seq1.mrna1
Chr1	gffcl	locus	114641812	114642401	.	-	.	ID=RLOC_00010376;geneIDs=comp151830_c0_seq1.path1;transcripts=comp151830_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114641812	114642401	.	-	.	ID=comp151830_c0_seq1.mrna1;geneID=comp151830_c0_seq1.path1;Name=comp151830_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.3;matches=575;mismatches=9;indels=13;unknowns=0;Target=comp151830_c0_seq1 591 1 .;CDS_Target=comp151830_c0_seq1 465 346 .;locus=RLOC_00010376
Chr1	stalkie_big_nohaplotig	exon	114641812	114642401	96	-	.	Parent=comp151830_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	114641938	114642057	.	-	0	Parent=comp151830_c0_seq1.mrna1
Chr1	gffcl	locus	114711430	114714678	.	-	.	ID=RLOC_00010377;geneIDs=Dv_FBgn0206074.1.path1;transcripts=Dv_FBgn0206074.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114711430	114714678	.	-	.	ID=Dv_FBgn0206074.1.mrna1;geneID=Dv_FBgn0206074.1.path1;Name=Dv_FBgn0206074.1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=3224;mismatches=10;indels=33;unknowns=0;Target=Dv_FBgn0206074.1 3252 1 .;locus=RLOC_00010377
Chr1	stalkie_big_nohaplotig	exon	114711430	114714678	98	-	.	Parent=Dv_FBgn0206074.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	114711430	114714678	.	-	0	Parent=Dv_FBgn0206074.1.mrna1
Chr1	gffcl	locus	114774807	114775539	.	-	.	ID=RLOC_00010378;geneIDs=comp160244_c6_seq1.path2;transcripts=comp160244_c6_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	114774807	114775539	.	-	.	ID=comp160244_c6_seq1.mrna2;geneID=comp160244_c6_seq1.path2;Name=comp160244_c6_seq1;Dir=indeterminatecoverage=23.4;identity=89.1;matches=653;mismatches=80;indels=0;unknowns=0;Target=comp160244_c6_seq1 3122 2390 .;locus=RLOC_00010378
Chr1	stalkie_big_nohaplotig	exon	114774807	114775539	89	-	.	Parent=comp160244_c6_seq1.mrna2
Chr1	gffcl	locus	114828275	114828827	.	+	.	ID=RLOC_00010379;geneIDs=comp1158504_c0_seq1.path1;transcripts=comp1158504_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114828275	114828827	.	+	.	ID=comp1158504_c0_seq1.mrna1;geneID=comp1158504_c0_seq1.path1;Name=comp1158504_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=435;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010379
Chr1	stalkie_big_nohaplotig	exon	114828275	114828324	100	+	.	Parent=comp1158504_c0_seq1.mrna1;Target=comp1158504_c0_seq1 1 50 +
Chr1	stalkie_big_nohaplotig	exon	114828383	114828553	100	+	.	Parent=comp1158504_c0_seq1.mrna1;Target=comp1158504_c0_seq1 51 221 +
Chr1	stalkie_big_nohaplotig	exon	114828614	114828827	100	+	.	Parent=comp1158504_c0_seq1.mrna1;Target=comp1158504_c0_seq1 222 435 +
Chr1	stalkie_big_nohaplotig	CDS	114828291	114828324	.	+	0	Parent=comp1158504_c0_seq1.mrna1;Target=comp1158504_c0_seq1 17 50 +
Chr1	stalkie_big_nohaplotig	CDS	114828383	114828553	.	+	2	Parent=comp1158504_c0_seq1.mrna1;Target=comp1158504_c0_seq1 51 221 +
Chr1	stalkie_big_nohaplotig	CDS	114828614	114828792	.	+	2	Parent=comp1158504_c0_seq1.mrna1;Target=comp1158504_c0_seq1 222 400 +
Chr1	gffcl	locus	114833071	114833688	.	+	.	ID=RLOC_00010380;geneIDs=comp1752609_c0_seq1.path1;transcripts=comp1752609_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114833071	114833688	.	+	.	ID=comp1752609_c0_seq1.mrna1;geneID=comp1752609_c0_seq1.path1;Name=comp1752609_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=447;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010380
Chr1	stalkie_big_nohaplotig	exon	114833071	114833133	100	+	.	Parent=comp1752609_c0_seq1.mrna1;Target=comp1752609_c0_seq1 1 63 +
Chr1	stalkie_big_nohaplotig	exon	114833208	114833384	100	+	.	Parent=comp1752609_c0_seq1.mrna1;Target=comp1752609_c0_seq1 64 240 +
Chr1	stalkie_big_nohaplotig	exon	114833482	114833688	100	+	.	Parent=comp1752609_c0_seq1.mrna1;Target=comp1752609_c0_seq1 241 447 +
Chr1	stalkie_big_nohaplotig	CDS	114833100	114833133	.	+	0	Parent=comp1752609_c0_seq1.mrna1;Target=comp1752609_c0_seq1 30 63 +
Chr1	stalkie_big_nohaplotig	CDS	114833208	114833384	.	+	2	Parent=comp1752609_c0_seq1.mrna1;Target=comp1752609_c0_seq1 64 240 +
Chr1	stalkie_big_nohaplotig	CDS	114833482	114833639	.	+	2	Parent=comp1752609_c0_seq1.mrna1;Target=comp1752609_c0_seq1 241 398 +
Chr1	gffcl	locus	114853100	114853893	.	+	.	ID=RLOC_00010381;geneIDs=comp155490_c1_seq1.path2;transcripts=comp155490_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	114853100	114853893	.	+	.	ID=comp155490_c1_seq1.mrna2;geneID=comp155490_c1_seq1.path2;Name=comp155490_c1_seq1;Dir=sensecoverage=19.3;identity=96.5;matches=612;mismatches=16;indels=6;unknowns=0;locus=RLOC_00010381
Chr1	stalkie_big_nohaplotig	exon	114853100	114853356	91	+	.	Parent=comp155490_c1_seq1.mrna2;Target=comp155490_c1_seq1 2616 2866 +
Chr1	stalkie_big_nohaplotig	exon	114853432	114853647	99	+	.	Parent=comp155490_c1_seq1.mrna2;Target=comp155490_c1_seq1 2867 3082 +
Chr1	stalkie_big_nohaplotig	exon	114853733	114853893	100	+	.	Parent=comp155490_c1_seq1.mrna2;Target=comp155490_c1_seq1 3083 3243 +
Chr1	gffcl	locus	114856410	114857160	.	+	.	ID=RLOC_00010382;geneIDs=comp155327_c0_seq1.path1;transcripts=comp155327_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114856410	114857160	.	+	.	ID=comp155327_c0_seq1.mrna1;geneID=comp155327_c0_seq1.path1;Name=comp155327_c0_seq1;Dir=antisensecoverage=84.9;identity=94.0;matches=591;mismatches=34;indels=4;unknowns=0;locus=RLOC_00010382
Chr1	stalkie_big_nohaplotig	exon	114856410	114856601	85	+	.	Parent=comp155327_c0_seq1.mrna1;Target=comp155327_c0_seq1 452 639 -
Chr1	stalkie_big_nohaplotig	exon	114856664	114856876	97	+	.	Parent=comp155327_c0_seq1.mrna1;Target=comp155327_c0_seq1 239 451 -
Chr1	stalkie_big_nohaplotig	exon	114856937	114857160	97	+	.	Parent=comp155327_c0_seq1.mrna1;Target=comp155327_c0_seq1 15 238 -
Chr1	stalkie_big_nohaplotig	CDS	114856825	114856876	.	+	0	Parent=comp155327_c0_seq1.mrna1;Target=comp155327_c0_seq1 239 290 .
Chr1	stalkie_big_nohaplotig	CDS	114856937	114857010	.	+	2	Parent=comp155327_c0_seq1.mrna1;Target=comp155327_c0_seq1 165 238 .
Chr1	gffcl	locus	114870314	114873505	.	-	.	ID=RLOC_00010383;geneIDs=comp163164_c0_seq1.path1;transcripts=comp163164_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114870314	114873505	.	-	.	ID=comp163164_c0_seq1.mrna1;geneID=comp163164_c0_seq1.path1;Name=comp163164_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=1715;mismatches=21;indels=38;unknowns=0;locus=RLOC_00010383
Chr1	stalkie_big_nohaplotig	exon	114870314	114870438	100	-	.	Parent=comp163164_c0_seq1.mrna1;Target=comp163164_c0_seq1 1772 1648 .
Chr1	stalkie_big_nohaplotig	exon	114871893	114873505	96	-	.	Parent=comp163164_c0_seq1.mrna1;Target=comp163164_c0_seq1 1647 1 .
Chr1	stalkie_big_nohaplotig	CDS	114870314	114870438	.	-	0	Parent=comp163164_c0_seq1.mrna1;Target=comp163164_c0_seq1 1772 1648 .
Chr1	stalkie_big_nohaplotig	CDS	114871893	114871928	.	-	0	Parent=comp163164_c0_seq1.mrna1;Target=comp163164_c0_seq1 1647 1614 .
Chr1	gffcl	locus	114873561	114874138	.	+	.	ID=RLOC_00010384;geneIDs=comp131595_c0_seq1.path1;transcripts=comp131595_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114873561	114874138	.	+	.	ID=comp131595_c0_seq1.mrna1;geneID=comp131595_c0_seq1.path1;Name=comp131595_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=577;mismatches=1;indels=0;unknowns=0;Target=comp131595_c0_seq1 578 1 .;CDS_Target=comp131595_c0_seq1 74 3 .;locus=RLOC_00010384
Chr1	stalkie_big_nohaplotig	exon	114873561	114874138	99	+	.	Parent=comp131595_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	114873563	114873634	.	+	0	Parent=comp131595_c0_seq1.mrna1
Chr1	gffcl	locus	114874142	114874596	.	+	.	ID=RLOC_00010385;geneIDs=comp144918_c0_seq1.path1;transcripts=comp144918_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	114874142	114874596	.	+	.	ID=comp144918_c0_seq1.mrna1;geneID=comp144918_c0_seq1.path1;Name=comp144918_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.8;matches=454;mismatches=0;indels=1;unknowns=0;Target=comp144918_c0_seq1 456 3 .;CDS_Target=comp144918_c0_seq1 219 181 .;locus=RLOC_00010385
Chr1	stalkie_big_nohaplotig	exon	114874142	114874596	99	+	.	Parent=comp144918_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	114874321	114874359	.	+	0	Parent=comp144918_c0_seq1.mrna1
Chr1	gffcl	locus	114991011	115003635	.	+	.	ID=RLOC_00010386;geneIDs=FBgn0250871.1.path2;transcripts=FBgn0250871.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	114991011	115003635	.	+	.	ID=FBgn0250871.1.mrna2;geneID=FBgn0250871.1.path2;Name=FBgn0250871.1;Dir=sensecoverage=95.7;identity=99.5;matches=2913;mismatches=9;indels=6;unknowns=0;locus=RLOC_00010386
Chr1	stalkie_big_nohaplotig	exon	114991011	114991265	99	+	.	Parent=FBgn0250871.1.mrna2;Target=FBgn0250871.1 133 387 +
Chr1	stalkie_big_nohaplotig	exon	114997319	114997402	98	+	.	Parent=FBgn0250871.1.mrna2;Target=FBgn0250871.1 388 471 +
Chr1	stalkie_big_nohaplotig	exon	114997495	114997632	100	+	.	Parent=FBgn0250871.1.mrna2;Target=FBgn0250871.1 472 609 +
Chr1	stalkie_big_nohaplotig	exon	115000799	115000938	99	+	.	Parent=FBgn0250871.1.mrna2;Target=FBgn0250871.1 610 749 +
Chr1	stalkie_big_nohaplotig	exon	115001141	115001503	100	+	.	Parent=FBgn0250871.1.mrna2;Target=FBgn0250871.1 750 1112 +
Chr1	stalkie_big_nohaplotig	exon	115001623	115003429	99	+	.	Parent=FBgn0250871.1.mrna2;Target=FBgn0250871.1 1113 2919 +
Chr1	stalkie_big_nohaplotig	exon	115003498	115003635	95	+	.	Parent=FBgn0250871.1.mrna2;Target=FBgn0250871.1 2920 3057 +
Chr1	gffcl	locus	115005570	115005999	.	-	.	ID=RLOC_00010387;geneIDs=comp148960_c2_seq1.path1;transcripts=comp148960_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115005570	115005999	.	-	.	ID=comp148960_c2_seq1.mrna1;geneID=comp148960_c2_seq1.path1;Name=comp148960_c2_seq1;Dir=indeterminatecoverage=99.8;identity=98.6;matches=424;mismatches=2;indels=4;unknowns=0;Target=comp148960_c2_seq1 427 2 .;CDS_Target=comp148960_c2_seq1 74 3 .;locus=RLOC_00010387
Chr1	stalkie_big_nohaplotig	exon	115005570	115005999	98	-	.	Parent=comp148960_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	115005924	115005998	.	-	0	Parent=comp148960_c2_seq1.mrna1
Chr1	gffcl	locus	115027674	115028943	.	+	.	ID=RLOC_00010388;geneIDs=comp148676_c0_seq1.path1;transcripts=comp148676_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115027674	115028943	.	+	.	ID=comp148676_c0_seq1.mrna1;geneID=comp148676_c0_seq1.path1;Name=comp148676_c0_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=755;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010388
Chr1	stalkie_big_nohaplotig	exon	115027674	115027861	98	+	.	Parent=comp148676_c0_seq1.mrna1;Target=comp148676_c0_seq1 573 760 -
Chr1	stalkie_big_nohaplotig	exon	115027942	115028118	100	+	.	Parent=comp148676_c0_seq1.mrna1;Target=comp148676_c0_seq1 396 572 -
Chr1	stalkie_big_nohaplotig	exon	115028249	115028473	100	+	.	Parent=comp148676_c0_seq1.mrna1;Target=comp148676_c0_seq1 171 395 -
Chr1	stalkie_big_nohaplotig	exon	115028774	115028943	98	+	.	Parent=comp148676_c0_seq1.mrna1;Target=comp148676_c0_seq1 1 170 -
Chr1	stalkie_big_nohaplotig	CDS	115027837	115027861	.	+	0	Parent=comp148676_c0_seq1.mrna1;Target=comp148676_c0_seq1 573 597 .
Chr1	stalkie_big_nohaplotig	CDS	115027942	115028118	.	+	2	Parent=comp148676_c0_seq1.mrna1;Target=comp148676_c0_seq1 396 572 .
Chr1	stalkie_big_nohaplotig	CDS	115028249	115028473	.	+	2	Parent=comp148676_c0_seq1.mrna1;Target=comp148676_c0_seq1 171 395 .
Chr1	stalkie_big_nohaplotig	CDS	115028774	115028847	.	+	2	Parent=comp148676_c0_seq1.mrna1;Target=comp148676_c0_seq1 97 170 .
Chr1	gffcl	locus	115066503	116011816	.	-	.	ID=RLOC_00010389;geneIDs=ORF899.path1,comp163642_c0_seq1.path1;transcripts=ORF899.mrna1,comp163642_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115066503	116011816	.	-	.	ID=ORF899.mrna1;geneID=ORF899.path1;Name=ORF899;Dir=indeterminatecoverage=73.4;identity=96.2;matches=963;mismatches=33;indels=5;unknowns=1;locus=RLOC_00010389
Chr1	stalkie_big_nohaplotig	exon	115066503	115066511	100	-	.	Parent=ORF899.mrna1;Target=ORF899 997 989 .
Chr1	stalkie_big_nohaplotig	exon	115068665	115068667	100	-	.	Parent=ORF899.mrna1;Target=ORF899 988 986 .
Chr1	stalkie_big_nohaplotig	exon	115072238	115072240	100	-	.	Parent=ORF899.mrna1;Target=ORF899 985 983 .
Chr1	stalkie_big_nohaplotig	exon	115076112	115076113	100	-	.	Parent=ORF899.mrna1;Target=ORF899 982 981 .
Chr1	stalkie_big_nohaplotig	exon	115099262	115099268	100	-	.	Parent=ORF899.mrna1;Target=ORF899 980 974 .
Chr1	stalkie_big_nohaplotig	exon	115101268	115101282	80	-	.	Parent=ORF899.mrna1;Target=ORF899 973 959 .
Chr1	stalkie_big_nohaplotig	exon	115101949	115101952	100	-	.	Parent=ORF899.mrna1;Target=ORF899 958 955 .
Chr1	stalkie_big_nohaplotig	exon	115104829	115104834	100	-	.	Parent=ORF899.mrna1;Target=ORF899 954 949 .
Chr1	stalkie_big_nohaplotig	exon	115107779	115107783	100	-	.	Parent=ORF899.mrna1;Target=ORF899 948 944 .
Chr1	stalkie_big_nohaplotig	exon	115125862	115125870	100	-	.	Parent=ORF899.mrna1;Target=ORF899 943 935 .
Chr1	stalkie_big_nohaplotig	exon	115127966	115128001	52	-	.	Parent=ORF899.mrna1;Target=ORF899 934 904 .
Chr1	stalkie_big_nohaplotig	exon	116010914	116011816	98	-	.	Parent=ORF899.mrna1;Target=ORF899 903 1 .
Chr1	stalkie_big_nohaplotig	CDS	115066504	115066511	.	-	0	Parent=ORF899.mrna1;Target=ORF899 996 989 .
Chr1	stalkie_big_nohaplotig	CDS	115068665	115068667	.	-	0	Parent=ORF899.mrna1;Target=ORF899 988 986 .
Chr1	stalkie_big_nohaplotig	CDS	115072238	115072240	.	-	0	Parent=ORF899.mrna1;Target=ORF899 985 983 .
Chr1	stalkie_big_nohaplotig	CDS	115076112	115076113	.	-	2	Parent=ORF899.mrna1;Target=ORF899 982 981 .
Chr1	stalkie_big_nohaplotig	CDS	115099262	115099268	.	-	0	Parent=ORF899.mrna1;Target=ORF899 980 974 .
Chr1	stalkie_big_nohaplotig	CDS	115101268	115101282	.	-	0	Parent=ORF899.mrna1;Target=ORF899 973 959 .
Chr1	stalkie_big_nohaplotig	CDS	115101949	115101952	.	-	1	Parent=ORF899.mrna1;Target=ORF899 958 955 .
Chr1	stalkie_big_nohaplotig	CDS	115104829	115104834	.	-	1	Parent=ORF899.mrna1;Target=ORF899 954 949 .
Chr1	stalkie_big_nohaplotig	CDS	115107779	115107783	.	-	0	Parent=ORF899.mrna1;Target=ORF899 948 944 .
Chr1	stalkie_big_nohaplotig	CDS	115125862	115125870	.	-	0	Parent=ORF899.mrna1;Target=ORF899 943 935 .
Chr1	stalkie_big_nohaplotig	CDS	115127966	115128001	.	-	0	Parent=ORF899.mrna1;Target=ORF899 934 904 .
Chr1	stalkie_big_nohaplotig	CDS	116010914	116011816	.	-	0	Parent=ORF899.mrna1;Target=ORF899 903 1 .
Chr1	stalkie_big_nohaplotig	mRNA	116007599	116011021	.	-	.	ID=comp163642_c0_seq1.mrna1;geneID=comp163642_c0_seq1.path1;Name=comp163642_c0_seq1;Dir=antisensecoverage=99.3;identity=99.6;matches=3342;mismatches=7;indels=7;unknowns=0;locus=RLOC_00010389
Chr1	stalkie_big_nohaplotig	exon	116007599	116007748	100	-	.	Parent=comp163642_c0_seq1.mrna1;Target=comp163642_c0_seq1 24 173 -
Chr1	stalkie_big_nohaplotig	exon	116007793	116008935	99	-	.	Parent=comp163642_c0_seq1.mrna1;Target=comp163642_c0_seq1 174 1317 -
Chr1	stalkie_big_nohaplotig	exon	116008966	116011021	99	-	.	Parent=comp163642_c0_seq1.mrna1;Target=comp163642_c0_seq1 1399 3460 -
Chr1	stalkie_big_nohaplotig	CDS	116007636	116007748	.	-	2	Parent=comp163642_c0_seq1.mrna1;Target=comp163642_c0_seq1 61 173 .
Chr1	stalkie_big_nohaplotig	CDS	116007793	116008225	.	-	0	Parent=comp163642_c0_seq1.mrna1;Target=comp163642_c0_seq1 174 606 .
Chr1	gffcl	locus	115110759	115111123	.	-	.	ID=RLOC_00010390;geneIDs=comp151573_c1_seq1.path10;transcripts=comp151573_c1_seq1.mrna10
Chr1	stalkie_big_nohaplotig	mRNA	115110759	115111123	.	-	.	ID=comp151573_c1_seq1.mrna10;geneID=comp151573_c1_seq1.path10;Name=comp151573_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=358;mismatches=4;indels=3;unknowns=0;Target=comp151573_c1_seq1 362 1 .;CDS_Target=comp151573_c1_seq1 120 1 .;locus=RLOC_00010390
Chr1	stalkie_big_nohaplotig	exon	115110759	115111123	98	-	.	Parent=comp151573_c1_seq1.mrna10
Chr1	stalkie_big_nohaplotig	CDS	115111004	115111123	.	-	0	Parent=comp151573_c1_seq1.mrna10
Chr1	gffcl	locus	115123738	115189084	.	-	.	ID=RLOC_00010391;geneIDs=FBgn0052499.1.path1;transcripts=FBgn0052499.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115123738	115189084	.	-	.	ID=FBgn0052499.1.mrna1;geneID=FBgn0052499.1.path1;Name=FBgn0052499.1;Dir=sensecoverage=100.0;identity=99.8;matches=1479;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010391
Chr1	stalkie_big_nohaplotig	exon	115123738	115124065	99	-	.	Parent=FBgn0052499.1.mrna1;Target=FBgn0052499.1 1155 1482 +
Chr1	stalkie_big_nohaplotig	exon	115134106	115134491	100	-	.	Parent=FBgn0052499.1.mrna1;Target=FBgn0052499.1 769 1154 +
Chr1	stalkie_big_nohaplotig	exon	115138152	115138371	100	-	.	Parent=FBgn0052499.1.mrna1;Target=FBgn0052499.1 549 768 +
Chr1	stalkie_big_nohaplotig	exon	115154887	115155029	98	-	.	Parent=FBgn0052499.1.mrna1;Target=FBgn0052499.1 406 548 +
Chr1	stalkie_big_nohaplotig	exon	115160295	115160422	100	-	.	Parent=FBgn0052499.1.mrna1;Target=FBgn0052499.1 278 405 +
Chr1	stalkie_big_nohaplotig	exon	115172666	115172777	100	-	.	Parent=FBgn0052499.1.mrna1;Target=FBgn0052499.1 166 277 +
Chr1	stalkie_big_nohaplotig	exon	115174622	115174710	100	-	.	Parent=FBgn0052499.1.mrna1;Target=FBgn0052499.1 77 165 +
Chr1	stalkie_big_nohaplotig	exon	115189009	115189084	100	-	.	Parent=FBgn0052499.1.mrna1;Target=FBgn0052499.1 1 76 +
Chr1	stalkie_big_nohaplotig	CDS	115123738	115124065	.	-	1	Parent=FBgn0052499.1.mrna1;Target=FBgn0052499.1 1155 1482 +
Chr1	stalkie_big_nohaplotig	CDS	115134106	115134491	.	-	0	Parent=FBgn0052499.1.mrna1;Target=FBgn0052499.1 769 1154 +
Chr1	stalkie_big_nohaplotig	CDS	115138152	115138371	.	-	1	Parent=FBgn0052499.1.mrna1;Target=FBgn0052499.1 549 768 +
Chr1	stalkie_big_nohaplotig	CDS	115154887	115155029	.	-	0	Parent=FBgn0052499.1.mrna1;Target=FBgn0052499.1 406 548 +
Chr1	stalkie_big_nohaplotig	CDS	115160295	115160422	.	-	2	Parent=FBgn0052499.1.mrna1;Target=FBgn0052499.1 278 405 +
Chr1	stalkie_big_nohaplotig	CDS	115172666	115172777	.	-	0	Parent=FBgn0052499.1.mrna1;Target=FBgn0052499.1 166 277 +
Chr1	stalkie_big_nohaplotig	CDS	115174622	115174710	.	-	2	Parent=FBgn0052499.1.mrna1;Target=FBgn0052499.1 77 165 +
Chr1	stalkie_big_nohaplotig	CDS	115189009	115189084	.	-	0	Parent=FBgn0052499.1.mrna1;Target=FBgn0052499.1 1 76 +
Chr1	gffcl	locus	115176756	115177393	.	+	.	ID=RLOC_00010392;geneIDs=comp154172_c0_seq1.path1;transcripts=comp154172_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115176756	115177393	.	+	.	ID=comp154172_c0_seq1.mrna1;geneID=comp154172_c0_seq1.path1;Name=comp154172_c0_seq1;Dir=sensecoverage=99.7;identity=98.9;matches=565;mismatches=6;indels=0;unknowns=0;locus=RLOC_00010392
Chr1	stalkie_big_nohaplotig	exon	115176756	115176963	98	+	.	Parent=comp154172_c0_seq1.mrna1;Target=comp154172_c0_seq1 3 210 +
Chr1	stalkie_big_nohaplotig	exon	115177031	115177393	99	+	.	Parent=comp154172_c0_seq1.mrna1;Target=comp154172_c0_seq1 211 573 +
Chr1	stalkie_big_nohaplotig	CDS	115176864	115176963	.	+	0	Parent=comp154172_c0_seq1.mrna1;Target=comp154172_c0_seq1 111 210 +
Chr1	stalkie_big_nohaplotig	CDS	115177031	115177065	.	+	2	Parent=comp154172_c0_seq1.mrna1;Target=comp154172_c0_seq1 211 245 +
Chr1	gffcl	locus	115344974	115345864	.	+	.	ID=RLOC_00010395;geneIDs=FBgn0033879.1.path2;transcripts=FBgn0033879.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	115344974	115345864	.	+	.	ID=FBgn0033879.1.mrna2;geneID=FBgn0033879.1.path2;Name=FBgn0033879.1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=879;mismatches=12;indels=0;unknowns=0;Target=FBgn0033879.1 891 1 .;locus=RLOC_00010395
Chr1	stalkie_big_nohaplotig	exon	115344974	115345864	98	+	.	Parent=FBgn0033879.1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	115344974	115345864	.	+	0	Parent=FBgn0033879.1.mrna2
Chr1	gffcl	locus	115361665	115362338	.	-	.	ID=RLOC_00010396;geneIDs=comp135167_c0_seq1.path1;transcripts=comp135167_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115361665	115362338	.	-	.	ID=comp135167_c0_seq1.mrna1;geneID=comp135167_c0_seq1.path1;Name=comp135167_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=673;mismatches=1;indels=0;unknowns=0;Target=comp135167_c0_seq1 674 1 .;CDS_Target=comp135167_c0_seq1 474 193 .;locus=RLOC_00010396
Chr1	stalkie_big_nohaplotig	exon	115361665	115362338	99	-	.	Parent=comp135167_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	115361865	115362146	.	-	0	Parent=comp135167_c0_seq1.mrna1
Chr1	gffcl	locus	115362415	115362834	.	-	.	ID=RLOC_00010397;geneIDs=comp596545_c0_seq1.path1;transcripts=comp596545_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115362415	115362834	.	-	.	ID=comp596545_c0_seq1.mrna1;geneID=comp596545_c0_seq1.path1;Name=comp596545_c0_seq1;Dir=indeterminatecoverage=94.6;identity=100.0;matches=420;mismatches=0;indels=0;unknowns=0;Target=comp596545_c0_seq1 420 1 .;CDS_Target=comp596545_c0_seq1 257 156 .;locus=RLOC_00010397
Chr1	stalkie_big_nohaplotig	exon	115362415	115362834	100	-	.	Parent=comp596545_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	115362578	115362679	.	-	0	Parent=comp596545_c0_seq1.mrna1
Chr1	gffcl	locus	115371421	115372071	.	+	.	ID=RLOC_00010398;geneIDs=comp152718_c0_seq1.path1;transcripts=comp152718_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115371421	115372071	.	+	.	ID=comp152718_c0_seq1.mrna1;geneID=comp152718_c0_seq1.path1;Name=comp152718_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.2;matches=634;mismatches=17;indels=22;unknowns=0;Target=comp152718_c0_seq1 673 1 .;CDS_Target=comp152718_c0_seq1 452 378 .;locus=RLOC_00010398
Chr1	stalkie_big_nohaplotig	exon	115371421	115372071	94	+	.	Parent=comp152718_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	115371793	115371855	.	+	0	Parent=comp152718_c0_seq1.mrna1
Chr1	gffcl	locus	115372202	115372745	.	+	.	ID=RLOC_00010399;geneIDs=comp157250_c0_seq1.path1;transcripts=comp157250_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115372202	115372745	.	+	.	ID=comp157250_c0_seq1.mrna1;geneID=comp157250_c0_seq1.path1;Name=comp157250_c0_seq1;Dir=indeterminatecoverage=99.1;identity=94.5;matches=529;mismatches=15;indels=16;unknowns=0;Target=comp157250_c0_seq1 565 6 .;CDS_Target=comp157250_c0_seq1 562 452 .;locus=RLOC_00010399
Chr1	stalkie_big_nohaplotig	exon	115372202	115372745	94	+	.	Parent=comp157250_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	115372632	115372742	.	+	0	Parent=comp157250_c0_seq1.mrna1
Chr1	gffcl	locus	115373789	115374915	.	+	.	ID=RLOC_00010400;geneIDs=comp144392_c0_seq1.path1,comp151666_c0_seq1.path1;transcripts=comp151666_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115374033	115374915	.	+	.	ID=comp151666_c0_seq1.mrna1;geneID=comp151666_c0_seq1.path1;Name=comp151666_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.4;matches=878;mismatches=2;indels=3;unknowns=0;Target=comp151666_c0_seq1 886 7 .;CDS_Target=comp151666_c0_seq1 478 410 .;locus=RLOC_00010400
Chr1	stalkie_big_nohaplotig	exon	115374033	115374915	99	+	.	Parent=comp151666_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	115374437	115374507	.	+	0	Parent=comp151666_c0_seq1.mrna1
Chr1	gffcl	locus	115511111	115511757	.	+	.	ID=RLOC_00010401;geneIDs=comp156290_c0_seq1.path1;transcripts=comp156290_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115511111	115511757	.	+	.	ID=comp156290_c0_seq1.mrna1;geneID=comp156290_c0_seq1.path1;Name=comp156290_c0_seq1;Dir=indeterminatecoverage=72.9;identity=97.2;matches=629;mismatches=18;indels=0;unknowns=0;Target=comp156290_c0_seq1 888 242 .;CDS_Target=comp156290_c0_seq1 789 535 .;locus=RLOC_00010401
Chr1	stalkie_big_nohaplotig	exon	115511111	115511757	97	+	.	Parent=comp156290_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	115511404	115511658	.	+	0	Parent=comp156290_c0_seq1.mrna1
Chr1	gffcl	locus	115551211	115552284	.	+	.	ID=RLOC_00010402;geneIDs=FBgn0025378.11.path1;transcripts=FBgn0025378.11.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115551211	115552284	.	+	.	ID=FBgn0025378.11.mrna1;geneID=FBgn0025378.11.path1;Name=FBgn0025378.11;Dir=sensecoverage=100.0;identity=99.7;matches=954;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010402
Chr1	stalkie_big_nohaplotig	exon	115551211	115551542	99	+	.	Parent=FBgn0025378.11.mrna1;Target=FBgn0025378.11 1 332 +
Chr1	stalkie_big_nohaplotig	exon	115551606	115551882	99	+	.	Parent=FBgn0025378.11.mrna1;Target=FBgn0025378.11 333 609 +
Chr1	stalkie_big_nohaplotig	exon	115551937	115552284	99	+	.	Parent=FBgn0025378.11.mrna1;Target=FBgn0025378.11 610 957 +
Chr1	stalkie_big_nohaplotig	CDS	115551211	115551542	.	+	0	Parent=FBgn0025378.11.mrna1;Target=FBgn0025378.11 1 332 +
Chr1	stalkie_big_nohaplotig	CDS	115551606	115551882	.	+	1	Parent=FBgn0025378.11.mrna1;Target=FBgn0025378.11 333 609 +
Chr1	stalkie_big_nohaplotig	CDS	115551937	115552284	.	+	0	Parent=FBgn0025378.11.mrna1;Target=FBgn0025378.11 610 957 +
Chr1	gffcl	locus	115595503	115742558	.	+	.	ID=RLOC_00010403;geneIDs=comp150174_c0_seq1.path1;transcripts=comp150174_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115595503	115742558	.	+	.	ID=comp150174_c0_seq1.mrna1;geneID=comp150174_c0_seq1.path1;Name=comp150174_c0_seq1;Dir=indeterminatecoverage=94.5;identity=97.1;matches=233;mismatches=7;indels=0;unknowns=0;locus=RLOC_00010403
Chr1	stalkie_big_nohaplotig	exon	115595503	115595514	100	+	.	Parent=comp150174_c0_seq1.mrna1;Target=comp150174_c0_seq1 26 15 .
Chr1	stalkie_big_nohaplotig	exon	115742331	115742558	96	+	.	Parent=comp150174_c0_seq1.mrna1;Target=comp150174_c0_seq1 254 27 .
Chr1	stalkie_big_nohaplotig	CDS	115595505	115595514	.	+	0	Parent=comp150174_c0_seq1.mrna1;Target=comp150174_c0_seq1 26 17 .
Chr1	stalkie_big_nohaplotig	CDS	115742331	115742467	.	+	2	Parent=comp150174_c0_seq1.mrna1;Target=comp150174_c0_seq1 163 27 .
Chr1	gffcl	locus	115602945	115603107	.	-	.	ID=RLOC_00010404;geneIDs=comp144820_c0_seq1.path1;transcripts=comp144820_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115602945	115603107	.	-	.	ID=comp144820_c0_seq1.mrna1;geneID=comp144820_c0_seq1.path1;Name=comp144820_c0_seq1;Dir=indeterminatecoverage=65.7;identity=98.2;matches=160;mismatches=3;indels=0;unknowns=0;Target=comp144820_c0_seq1 248 86 .;CDS_Target=comp144820_c0_seq1 243 88 .;locus=RLOC_00010404
Chr1	stalkie_big_nohaplotig	exon	115602945	115603107	98	-	.	Parent=comp144820_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	115602950	115603105	.	-	0	Parent=comp144820_c0_seq1.mrna1
Chr1	gffcl	locus	115632837	115633569	.	+	.	ID=RLOC_00010405;geneIDs=FBgn0026268.1.path1;transcripts=FBgn0026268.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115632837	115633569	.	+	.	ID=FBgn0026268.1.mrna1;geneID=FBgn0026268.1.path1;Name=FBgn0026268.1;Dir=sensecoverage=100.0;identity=99.1;matches=663;mismatches=6;indels=0;unknowns=0;locus=RLOC_00010405
Chr1	stalkie_big_nohaplotig	exon	115632837	115633331	99	+	.	Parent=FBgn0026268.1.mrna1;Target=FBgn0026268.1 1 495 +
Chr1	stalkie_big_nohaplotig	exon	115633396	115633569	97	+	.	Parent=FBgn0026268.1.mrna1;Target=FBgn0026268.1 496 669 +
Chr1	stalkie_big_nohaplotig	CDS	115632837	115633331	.	+	0	Parent=FBgn0026268.1.mrna1;Target=FBgn0026268.1 1 495 +
Chr1	stalkie_big_nohaplotig	CDS	115633396	115633569	.	+	0	Parent=FBgn0026268.1.mrna1;Target=FBgn0026268.1 496 669 +
Chr1	gffcl	locus	115650064	115650881	.	-	.	ID=RLOC_00010406;geneIDs=FBgn0026268.2.path1;transcripts=FBgn0026268.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115650064	115650881	.	-	.	ID=FBgn0026268.2.mrna1;geneID=FBgn0026268.2.path1;Name=FBgn0026268.2;Dir=indeterminatecoverage=96.8;identity=98.4;matches=746;mismatches=12;indels=0;unknowns=0;locus=RLOC_00010406
Chr1	stalkie_big_nohaplotig	exon	115650064	115650236	94	-	.	Parent=FBgn0026268.2.mrna1;Target=FBgn0026268.2 782 610 .
Chr1	stalkie_big_nohaplotig	exon	115650297	115650881	99	-	.	Parent=FBgn0026268.2.mrna1;Target=FBgn0026268.2 609 25 .
Chr1	stalkie_big_nohaplotig	CDS	115650066	115650236	.	-	0	Parent=FBgn0026268.2.mrna1;Target=FBgn0026268.2 780 610 .
Chr1	stalkie_big_nohaplotig	CDS	115650297	115650881	.	-	0	Parent=FBgn0026268.2.mrna1;Target=FBgn0026268.2 609 25 .
Chr1	gffcl	locus	115652952	115653258	.	-	.	ID=RLOC_00010407;geneIDs=comp152427_c3_seq1.path1;transcripts=comp152427_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115652952	115653258	.	-	.	ID=comp152427_c3_seq1.mrna1;geneID=comp152427_c3_seq1.path1;Name=comp152427_c3_seq1;Dir=indeterminatecoverage=99.4;identity=100.0;matches=307;mismatches=0;indels=0;unknowns=0;Target=comp152427_c3_seq1 309 3 .;CDS_Target=comp152427_c3_seq1 179 3 .;locus=RLOC_00010407
Chr1	stalkie_big_nohaplotig	exon	115652952	115653258	100	-	.	Parent=comp152427_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	115653082	115653258	.	-	0	Parent=comp152427_c3_seq1.mrna1
Chr1	gffcl	locus	115686490	115693258	.	-	.	ID=RLOC_00010408;geneIDs=FBgn0030228.1.path1;transcripts=FBgn0030228.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115686490	115693258	.	-	.	ID=FBgn0030228.1.mrna1;geneID=FBgn0030228.1.path1;Name=FBgn0030228.1;Dir=sensecoverage=100.0;identity=99.6;matches=1909;mismatches=8;indels=0;unknowns=0;locus=RLOC_00010408
Chr1	stalkie_big_nohaplotig	exon	115686490	115686681	99	-	.	Parent=FBgn0030228.1.mrna1;Target=FBgn0030228.1 1726 1917 +
Chr1	stalkie_big_nohaplotig	exon	115689368	115689582	100	-	.	Parent=FBgn0030228.1.mrna1;Target=FBgn0030228.1 1511 1725 +
Chr1	stalkie_big_nohaplotig	exon	115689648	115689879	100	-	.	Parent=FBgn0030228.1.mrna1;Target=FBgn0030228.1 1279 1510 +
Chr1	stalkie_big_nohaplotig	exon	115690006	115690536	99	-	.	Parent=FBgn0030228.1.mrna1;Target=FBgn0030228.1 748 1278 +
Chr1	stalkie_big_nohaplotig	exon	115690598	115690705	100	-	.	Parent=FBgn0030228.1.mrna1;Target=FBgn0030228.1 640 747 +
Chr1	stalkie_big_nohaplotig	exon	115690994	115691478	99	-	.	Parent=FBgn0030228.1.mrna1;Target=FBgn0030228.1 155 639 +
Chr1	stalkie_big_nohaplotig	exon	115691565	115691692	100	-	.	Parent=FBgn0030228.1.mrna1;Target=FBgn0030228.1 27 154 +
Chr1	stalkie_big_nohaplotig	exon	115693233	115693258	100	-	.	Parent=FBgn0030228.1.mrna1;Target=FBgn0030228.1 1 26 +
Chr1	stalkie_big_nohaplotig	CDS	115686490	115686681	.	-	0	Parent=FBgn0030228.1.mrna1;Target=FBgn0030228.1 1726 1917 +
Chr1	stalkie_big_nohaplotig	CDS	115689368	115689582	.	-	2	Parent=FBgn0030228.1.mrna1;Target=FBgn0030228.1 1511 1725 +
Chr1	stalkie_big_nohaplotig	CDS	115689648	115689879	.	-	0	Parent=FBgn0030228.1.mrna1;Target=FBgn0030228.1 1279 1510 +
Chr1	stalkie_big_nohaplotig	CDS	115690006	115690536	.	-	0	Parent=FBgn0030228.1.mrna1;Target=FBgn0030228.1 748 1278 +
Chr1	stalkie_big_nohaplotig	CDS	115690598	115690705	.	-	0	Parent=FBgn0030228.1.mrna1;Target=FBgn0030228.1 640 747 +
Chr1	stalkie_big_nohaplotig	CDS	115690994	115691478	.	-	2	Parent=FBgn0030228.1.mrna1;Target=FBgn0030228.1 155 639 +
Chr1	stalkie_big_nohaplotig	CDS	115691565	115691692	.	-	1	Parent=FBgn0030228.1.mrna1;Target=FBgn0030228.1 27 154 +
Chr1	stalkie_big_nohaplotig	CDS	115693233	115693258	.	-	0	Parent=FBgn0030228.1.mrna1;Target=FBgn0030228.1 1 26 +
Chr1	gffcl	locus	115694978	115695367	.	-	.	ID=RLOC_00010409;geneIDs=comp113682_c0_seq1.path1;transcripts=comp113682_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115694978	115695367	.	-	.	ID=comp113682_c0_seq1.mrna1;geneID=comp113682_c0_seq1.path1;Name=comp113682_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=390;mismatches=0;indels=0;unknowns=0;Target=comp113682_c0_seq1 390 1 .;CDS_Target=comp113682_c0_seq1 190 2 .;locus=RLOC_00010409
Chr1	stalkie_big_nohaplotig	exon	115694978	115695367	100	-	.	Parent=comp113682_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	115695178	115695366	.	-	0	Parent=comp113682_c0_seq1.mrna1
Chr1	gffcl	locus	115699530	115699860	.	-	.	ID=RLOC_00010410;geneIDs=comp147113_c0_seq1.path1;transcripts=comp147113_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115699530	115699860	.	-	.	ID=comp147113_c0_seq1.mrna1;geneID=comp147113_c0_seq1.path1;Name=comp147113_c0_seq1;Dir=indeterminatecoverage=90.8;identity=97.0;matches=324;mismatches=7;indels=3;unknowns=0;Target=comp147113_c0_seq1 334 1 .;CDS_Target=comp147113_c0_seq1 328 215 .;locus=RLOC_00010410
Chr1	stalkie_big_nohaplotig	exon	115699530	115699860	97	-	.	Parent=comp147113_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	115699536	115699649	.	-	0	Parent=comp147113_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115738888	115739719	.	-	.	ID=comp157340_c0_seq1.mrna1;geneID=comp157340_c0_seq1.path1;Name=comp157340_c0_seq1;Dir=indeterminatecoverage=98.0;identity=99.2;matches=827;mismatches=5;indels=2;unknowns=0;Target=comp157340_c0_seq1 837 4 .;CDS_Target=comp157340_c0_seq1 91 5 .;locus=RLOC_00010411
Chr1	stalkie_big_nohaplotig	exon	115738888	115739719	99	-	.	Parent=comp157340_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	115739632	115739718	.	-	0	Parent=comp157340_c0_seq1.mrna1
Chr1	gffcl	locus	115704898	115705228	.	-	.	ID=RLOC_00010412;geneIDs=comp147113_c0_seq1.path2;transcripts=comp147113_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	115704898	115705228	.	-	.	ID=comp147113_c0_seq1.mrna2;geneID=comp147113_c0_seq1.path2;Name=comp147113_c0_seq1;Dir=indeterminatecoverage=90.8;identity=97.0;matches=324;mismatches=7;indels=3;unknowns=0;Target=comp147113_c0_seq1 334 1 .;CDS_Target=comp147113_c0_seq1 328 215 .;locus=RLOC_00010412
Chr1	stalkie_big_nohaplotig	exon	115704898	115705228	97	-	.	Parent=comp147113_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	115704904	115705017	.	-	0	Parent=comp147113_c0_seq1.mrna2
Chr1	gffcl	locus	115732274	115732879	.	+	.	ID=RLOC_00010413;geneIDs=FBgn0032833.2.path1;transcripts=FBgn0032833.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115732274	115732879	.	+	.	ID=FBgn0032833.2.mrna1;geneID=FBgn0032833.2.path1;Name=FBgn0032833.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=606;mismatches=0;indels=0;unknowns=0;Target=FBgn0032833.2 606 1 .;locus=RLOC_00010413
Chr1	stalkie_big_nohaplotig	exon	115732274	115732879	100	+	.	Parent=FBgn0032833.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	115732274	115732879	.	+	0	Parent=FBgn0032833.2.mrna1
Chr1	gffcl	locus	115740457	115741271	.	-	.	ID=RLOC_00010414;geneIDs=comp163237_c2_seq1.path1;transcripts=comp163237_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115740457	115741271	.	-	.	ID=comp163237_c2_seq1.mrna1;geneID=comp163237_c2_seq1.path1;Name=comp163237_c2_seq1;Dir=indeterminatecoverage=97.5;identity=96.9;matches=790;mismatches=25;indels=0;unknowns=0;Target=comp163237_c2_seq1 836 22 .;CDS_Target=comp163237_c2_seq1 573 475 .;locus=RLOC_00010414
Chr1	stalkie_big_nohaplotig	exon	115740457	115741271	96	-	.	Parent=comp163237_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	115740720	115740818	.	-	0	Parent=comp163237_c2_seq1.mrna1
Chr1	gffcl	locus	115741330	117397624	.	+	.	ID=RLOC_00010415;geneIDs=comp161484_c0_seq1.path1;transcripts=comp161484_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115741330	117397624	.	+	.	ID=comp161484_c0_seq1.mrna1;geneID=comp161484_c0_seq1.path1;Name=comp161484_c0_seq1;Dir=indeterminatecoverage=99.8;identity=87.8;matches=1094;mismatches=64;indels=88;unknowns=0;Target=comp161484_c0_seq1 843 730 .;locus=RLOC_00010415
Chr1	stalkie_big_nohaplotig	exon	115741330	115742330	89	+	.	Parent=comp161484_c0_seq1.mrna1;Target=comp161484_c0_seq1 1052 1 .
Chr1	stalkie_big_nohaplotig	exon	117397447	117397624	78	+	.	Parent=comp161484_c0_seq1.mrna1;Target=comp161484_c0_seq1 1225 1053 .
Chr1	stalkie_big_nohaplotig	CDS	115742010	115742123	.	+	0	Parent=comp161484_c0_seq1.mrna1
Chr1	gffcl	locus	115742664	115742896	.	+	.	ID=RLOC_00010416;geneIDs=comp149831_c0_seq1.path1;transcripts=comp149831_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115742664	115742896	.	+	.	ID=comp149831_c0_seq1.mrna1;geneID=comp149831_c0_seq1.path1;Name=comp149831_c0_seq1;Dir=indeterminatecoverage=99.6;identity=97.6;matches=202;mismatches=5;indels=0;unknowns=0;Target=comp149831_c0_seq1 47 3 .;locus=RLOC_00010416
Chr1	stalkie_big_nohaplotig	exon	115742664	115742709	93	+	.	Parent=comp149831_c0_seq1.mrna1;Target=comp149831_c0_seq1 47 2 .
Chr1	stalkie_big_nohaplotig	exon	115742736	115742896	98	+	.	Parent=comp149831_c0_seq1.mrna1;Target=comp149831_c0_seq1 224 64 .
Chr1	stalkie_big_nohaplotig	CDS	115742665	115742709	.	+	0	Parent=comp149831_c0_seq1.mrna1
Chr1	gffcl	locus	115786344	115787287	.	-	.	ID=RLOC_00010417;geneIDs=comp152197_c0_seq1.path1;transcripts=comp152197_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115786344	115787287	.	-	.	ID=comp152197_c0_seq1.mrna1;geneID=comp152197_c0_seq1.path1;Name=comp152197_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=931;mismatches=5;indels=19;unknowns=0;Target=comp152197_c0_seq1 947 1 .;CDS_Target=comp152197_c0_seq1 42 1 .;locus=RLOC_00010417
Chr1	stalkie_big_nohaplotig	exon	115786344	115787287	97	-	.	Parent=comp152197_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	115787251	115787287	.	-	0	Parent=comp152197_c0_seq1.mrna1
Chr1	gffcl	locus	115790679	115792598	.	-	.	ID=RLOC_00010418;geneIDs=FBgn0030182.path1;transcripts=FBgn0030182.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115790679	115792598	.	-	.	ID=FBgn0030182.mrna1;geneID=FBgn0030182.path1;Name=FBgn0030182;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1916;mismatches=4;indels=0;unknowns=0;Target=FBgn0030182 1920 1 .;locus=RLOC_00010418
Chr1	stalkie_big_nohaplotig	exon	115790679	115792598	99	-	.	Parent=FBgn0030182.mrna1
Chr1	stalkie_big_nohaplotig	CDS	115790679	115792598	.	-	0	Parent=FBgn0030182.mrna1
Chr1	gffcl	locus	115889004	115889930	.	-	.	ID=RLOC_00010419;geneIDs=comp159656_c0_seq1.path1;transcripts=comp159656_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115889004	115889930	.	-	.	ID=comp159656_c0_seq1.mrna1;geneID=comp159656_c0_seq1.path1;Name=comp159656_c0_seq1;Dir=antisensecoverage=99.4;identity=93.3;matches=820;mismatches=35;indels=24;unknowns=0;Target=comp159656_c0_seq1 232 618 .;locus=RLOC_00010419
Chr1	stalkie_big_nohaplotig	exon	115889004	115889642	96	-	.	Parent=comp159656_c0_seq1.mrna1;Target=comp159656_c0_seq1 1 641 -
Chr1	stalkie_big_nohaplotig	exon	115889715	115889930	84	-	.	Parent=comp159656_c0_seq1.mrna1;Target=comp159656_c0_seq1 642 879 -
Chr1	stalkie_big_nohaplotig	CDS	115889233	115889619	.	-	0	Parent=comp159656_c0_seq1.mrna1
Chr1	gffcl	locus	115897104	115897912	.	-	.	ID=RLOC_00010420;geneIDs=ORF2688.path1;transcripts=ORF2688.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115897104	115897912	.	-	.	ID=ORF2688.mrna1;geneID=ORF2688.path1;Name=ORF2688;Dir=indeterminatecoverage=98.4;identity=98.8;matches=799;mismatches=10;indels=0;unknowns=0;Target=ORF2688 810 2 .;CDS_Target=ORF2688 810 4 .;locus=RLOC_00010420
Chr1	stalkie_big_nohaplotig	exon	115897104	115897912	98	-	.	Parent=ORF2688.mrna1
Chr1	stalkie_big_nohaplotig	CDS	115897104	115897910	.	-	0	Parent=ORF2688.mrna1
Chr1	gffcl	locus	115900918	115942763	.	-	.	ID=RLOC_00010421;geneIDs=FBgn0083940.1.path1;transcripts=FBgn0083940.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	115900918	115942763	.	-	.	ID=FBgn0083940.1.mrna1;geneID=FBgn0083940.1.path1;Name=FBgn0083940.1;Dir=sensecoverage=100.0;identity=99.2;matches=1410;mismatches=6;indels=6;unknowns=0;locus=RLOC_00010421
Chr1	stalkie_big_nohaplotig	exon	115900918	115901022	100	-	.	Parent=FBgn0083940.1.mrna1;Target=FBgn0083940.1 1312 1416 +
Chr1	stalkie_big_nohaplotig	exon	115902960	115903052	98	-	.	Parent=FBgn0083940.1.mrna1;Target=FBgn0083940.1 1219 1311 +
Chr1	stalkie_big_nohaplotig	exon	115903235	115903494	99	-	.	Parent=FBgn0083940.1.mrna1;Target=FBgn0083940.1 959 1218 +
Chr1	stalkie_big_nohaplotig	exon	115916255	115916407	100	-	.	Parent=FBgn0083940.1.mrna1;Target=FBgn0083940.1 806 958 +
Chr1	stalkie_big_nohaplotig	exon	115916613	115916721	100	-	.	Parent=FBgn0083940.1.mrna1;Target=FBgn0083940.1 697 805 +
Chr1	stalkie_big_nohaplotig	exon	115942062	115942763	98	-	.	Parent=FBgn0083940.1.mrna1;Target=FBgn0083940.1 1 696 +
Chr1	stalkie_big_nohaplotig	CDS	115900918	115901022	.	-	0	Parent=FBgn0083940.1.mrna1;Target=FBgn0083940.1 1312 1416 +
Chr1	stalkie_big_nohaplotig	CDS	115902960	115903052	.	-	0	Parent=FBgn0083940.1.mrna1;Target=FBgn0083940.1 1219 1311 +
Chr1	stalkie_big_nohaplotig	CDS	115903235	115903494	.	-	2	Parent=FBgn0083940.1.mrna1;Target=FBgn0083940.1 959 1218 +
Chr1	stalkie_big_nohaplotig	CDS	115916255	115916407	.	-	2	Parent=FBgn0083940.1.mrna1;Target=FBgn0083940.1 806 958 +
Chr1	stalkie_big_nohaplotig	CDS	115916613	115916721	.	-	0	Parent=FBgn0083940.1.mrna1;Target=FBgn0083940.1 697 805 +
Chr1	stalkie_big_nohaplotig	CDS	115942062	115942763	.	-	0	Parent=FBgn0083940.1.mrna1;Target=FBgn0083940.1 1 696 +
Chr1	gffcl	locus	116016312	116025710	.	.	.	ID=RLOC_00010423;geneIDs=ORF279.path1,comp161820_c0_seq1.path1,comp163838_c0_seq1.path1;transcripts=comp161820_c0_seq1.mrna1,ORF279.mrna1,comp163838_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116016312	116025710	.	+	.	ID=comp161820_c0_seq1.mrna1;geneID=comp161820_c0_seq1.path1;Name=comp161820_c0_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=3384;mismatches=20;indels=0;unknowns=0;Target=comp161820_c0_seq1 476 811 +;locus=RLOC_00010423
Chr1	stalkie_big_nohaplotig	exon	116016312	116018991	99	+	.	Parent=comp161820_c0_seq1.mrna1;Target=comp161820_c0_seq1 1 2680 +
Chr1	stalkie_big_nohaplotig	exon	116024987	116025710	98	+	.	Parent=comp161820_c0_seq1.mrna1;Target=comp161820_c0_seq1 2681 3404 +
Chr1	stalkie_big_nohaplotig	CDS	116016787	116017122	.	+	0	Parent=comp161820_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116017010	116025167	.	-	.	ID=ORF279.mrna1;geneID=ORF279.path1;Name=ORF279;Dir=indeterminatecoverage=100.0;identity=99.4;matches=2151;mismatches=12;indels=0;unknowns=0;locus=RLOC_00010423
Chr1	stalkie_big_nohaplotig	exon	116017010	116018991	99	-	.	Parent=ORF279.mrna1;Target=ORF279 2163 182 .
Chr1	stalkie_big_nohaplotig	exon	116024987	116025167	97	-	.	Parent=ORF279.mrna1;Target=ORF279 181 1 .
Chr1	stalkie_big_nohaplotig	CDS	116017010	116018991	.	-	2	Parent=ORF279.mrna1;Target=ORF279 2163 182 .
Chr1	stalkie_big_nohaplotig	CDS	116024987	116025167	.	-	0	Parent=ORF279.mrna1;Target=ORF279 181 1 .
Chr1	stalkie_big_nohaplotig	mRNA	116018900	116021390	.	-	.	ID=comp163838_c0_seq1.mrna1;geneID=comp163838_c0_seq1.path1;Name=comp163838_c0_seq1;Dir=indeterminatecoverage=72.7;identity=99.2;matches=2474;mismatches=16;indels=5;unknowns=0;Target=comp163838_c0_seq1 3285 792 .;CDS_Target=comp163838_c0_seq1 1364 792 .;locus=RLOC_00010423
Chr1	stalkie_big_nohaplotig	exon	116018900	116021390	99	-	.	Parent=comp163838_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	116020817	116021390	.	-	0	Parent=comp163838_c0_seq1.mrna1
Chr1	gffcl	locus	116042373	116042824	.	-	.	ID=RLOC_00010424;geneIDs=comp151833_c0_seq1.path1;transcripts=comp151833_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116042373	116042824	.	-	.	ID=comp151833_c0_seq1.mrna1;geneID=comp151833_c0_seq1.path1;Name=comp151833_c0_seq1;Dir=indeterminatecoverage=98.5;identity=99.6;matches=450;mismatches=2;indels=0;unknowns=0;Target=comp151833_c0_seq1 459 8 .;CDS_Target=comp151833_c0_seq1 120 10 .;locus=RLOC_00010424
Chr1	stalkie_big_nohaplotig	exon	116042373	116042824	99	-	.	Parent=comp151833_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	116042712	116042822	.	-	0	Parent=comp151833_c0_seq1.mrna1
Chr1	gffcl	locus	116046397	116047355	.	+	.	ID=RLOC_00010425;geneIDs=comp145847_c0_seq1.path1;transcripts=comp145847_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116046397	116047355	.	+	.	ID=comp145847_c0_seq1.mrna1;geneID=comp145847_c0_seq1.path1;Name=comp145847_c0_seq1;Dir=sensecoverage=100.0;identity=93.7;matches=738;mismatches=33;indels=17;unknowns=0;Target=comp145847_c0_seq1 533 631 +;locus=RLOC_00010425
Chr1	stalkie_big_nohaplotig	exon	116046397	116046624	93	+	.	Parent=comp145847_c0_seq1.mrna1;Target=comp145847_c0_seq1 1 232 +
Chr1	stalkie_big_nohaplotig	exon	116046806	116047355	93	+	.	Parent=comp145847_c0_seq1.mrna1;Target=comp145847_c0_seq1 233 781 +
Chr1	stalkie_big_nohaplotig	CDS	116047102	116047205	.	+	0	Parent=comp145847_c0_seq1.mrna1
Chr1	gffcl	locus	116094807	116095588	.	-	.	ID=RLOC_00010427;geneIDs=ORF2974.path1;transcripts=ORF2974.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116094807	116095588	.	-	.	ID=ORF2974.mrna1;geneID=ORF2974.path1;Name=ORF2974;Dir=indeterminatecoverage=100.0;identity=99.4;matches=778;mismatches=4;indels=1;unknowns=0;Target=ORF2974 783 1 .;CDS_Target=ORF2974 110 39 .;locus=RLOC_00010427
Chr1	stalkie_big_nohaplotig	exon	116094807	116095588	99	-	.	Parent=ORF2974.mrna1
Chr1	stalkie_big_nohaplotig	CDS	116095480	116095550	.	-	0	Parent=ORF2974.mrna1
Chr1	gffcl	locus	116104676	116105828	.	-	.	ID=RLOC_00010428;geneIDs=ORF1479.path1;transcripts=ORF1479.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116104676	116105828	.	-	.	ID=ORF1479.mrna1;geneID=ORF1479.path1;Name=ORF1479;Dir=sensecoverage=100.0;identity=98.4;matches=1072;mismatches=17;indels=0;unknowns=0;locus=RLOC_00010428
Chr1	stalkie_big_nohaplotig	exon	116104676	116105556	98	-	.	Parent=ORF1479.mrna1;Target=ORF1479 209 1089 +
Chr1	stalkie_big_nohaplotig	exon	116105621	116105828	98	-	.	Parent=ORF1479.mrna1;Target=ORF1479 1 208 +
Chr1	stalkie_big_nohaplotig	CDS	116104676	116105556	.	-	2	Parent=ORF1479.mrna1;Target=ORF1479 209 1089 +
Chr1	stalkie_big_nohaplotig	CDS	116105621	116105828	.	-	0	Parent=ORF1479.mrna1;Target=ORF1479 1 208 +
Chr1	gffcl	locus	116123448	116124226	.	-	.	ID=RLOC_00010429;geneIDs=comp141852_c0_seq1.path1;transcripts=comp141852_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116123448	116124226	.	-	.	ID=comp141852_c0_seq1.mrna1;geneID=comp141852_c0_seq1.path1;Name=comp141852_c0_seq1;Dir=indeterminatecoverage=97.4;identity=90.0;matches=701;mismatches=43;indels=35;unknowns=0;Target=comp141852_c0_seq1 764 21 .;CDS_Target=comp141852_c0_seq1 515 258 .;locus=RLOC_00010429
Chr1	stalkie_big_nohaplotig	exon	116123448	116124226	89	-	.	Parent=comp141852_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	116123697	116123989	.	-	0	Parent=comp141852_c0_seq1.mrna1
Chr1	gffcl	locus	116170815	116171705	.	-	.	ID=RLOC_00010431;geneIDs=comp149111_c0_seq1.path1;transcripts=comp149111_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116170815	116171705	.	-	.	ID=comp149111_c0_seq1.mrna1;geneID=comp149111_c0_seq1.path1;Name=comp149111_c0_seq1;Dir=indeterminatecoverage=95.8;identity=98.9;matches=881;mismatches=10;indels=0;unknowns=0;Target=comp149111_c0_seq1 926 36 .;CDS_Target=comp149111_c0_seq1 772 197 .;locus=RLOC_00010431
Chr1	stalkie_big_nohaplotig	exon	116170815	116171705	98	-	.	Parent=comp149111_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	116170969	116171544	.	-	0	Parent=comp149111_c0_seq1.mrna1
Chr1	gffcl	locus	116191295	116191728	.	+	.	ID=RLOC_00010432;geneIDs=comp145906_c0_seq1.path1;transcripts=comp145906_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116191295	116191728	.	+	.	ID=comp145906_c0_seq1.mrna1;geneID=comp145906_c0_seq1.path1;Name=comp145906_c0_seq1;Dir=indeterminatecoverage=95.8;identity=99.1;matches=430;mismatches=3;indels=1;unknowns=0;Target=comp145906_c0_seq1 452 20 .;CDS_Target=comp145906_c0_seq1 170 21 .;locus=RLOC_00010432
Chr1	stalkie_big_nohaplotig	exon	116191295	116191728	99	+	.	Parent=comp145906_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	116191296	116191445	.	+	0	Parent=comp145906_c0_seq1.mrna1
Chr1	gffcl	locus	116225672	116226099	.	+	.	ID=RLOC_00010433;geneIDs=FBgn0085387.1.path1;transcripts=FBgn0085387.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116225672	116226099	.	+	.	ID=FBgn0085387.1.mrna1;geneID=FBgn0085387.1.path1;Name=FBgn0085387.1;Dir=sensecoverage=28.5;identity=99.7;matches=323;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010433
Chr1	stalkie_big_nohaplotig	exon	116225672	116225806	99	+	.	Parent=FBgn0085387.1.mrna1;Target=FBgn0085387.1 57 191 +
Chr1	stalkie_big_nohaplotig	exon	116225911	116226099	100	+	.	Parent=FBgn0085387.1.mrna1;Target=FBgn0085387.1 192 380 +
Chr1	stalkie_big_nohaplotig	CDS	116225673	116225806	.	+	0	Parent=FBgn0085387.1.mrna1;Target=FBgn0085387.1 58 191 +
Chr1	stalkie_big_nohaplotig	CDS	116225911	116226097	.	+	1	Parent=FBgn0085387.1.mrna1;Target=FBgn0085387.1 192 378 +
Chr1	gffcl	locus	116242860	116243923	.	-	.	ID=RLOC_00010434;geneIDs=comp151010_c1_seq1.path1;transcripts=comp151010_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116242860	116243923	.	-	.	ID=comp151010_c1_seq1.mrna1;geneID=comp151010_c1_seq1.path1;Name=comp151010_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1058;mismatches=6;indels=0;unknowns=0;Target=comp151010_c1_seq1 1064 1 .;CDS_Target=comp151010_c1_seq1 338 3 .;locus=RLOC_00010434
Chr1	stalkie_big_nohaplotig	exon	116242860	116243923	99	-	.	Parent=comp151010_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	116243586	116243921	.	-	0	Parent=comp151010_c1_seq1.mrna1
Chr1	gffcl	locus	116365101	116365231	.	-	.	ID=RLOC_00010435;geneIDs=FBgn0250871.1.path1;transcripts=FBgn0250871.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116365101	116365231	.	-	.	ID=FBgn0250871.1.mrna1;geneID=FBgn0250871.1.path1;Name=FBgn0250871.1;Dir=indeterminatecoverage=4.3;identity=99.2;matches=131;mismatches=0;indels=1;unknowns=0;Target=FBgn0250871.1 132 1 .;CDS_Target=FBgn0250871.1 80 3 .;locus=RLOC_00010435
Chr1	stalkie_big_nohaplotig	exon	116365101	116365231	99	-	.	Parent=FBgn0250871.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	116365153	116365229	.	-	0	Parent=FBgn0250871.1.mrna1
Chr1	gffcl	locus	116382519	118080795	.	-	.	ID=RLOC_00010437;geneIDs=comp153930_c0_seq1.path1;transcripts=comp153930_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116382519	118080795	.	-	.	ID=comp153930_c0_seq1.mrna1;geneID=comp153930_c0_seq1.path1;Name=comp153930_c0_seq1;Dir=indeterminatecoverage=70.0;identity=95.7;matches=243;mismatches=8;indels=3;unknowns=0;Target=comp153930_c0_seq1 116 57 .;locus=RLOC_00010437
Chr1	stalkie_big_nohaplotig	exon	116382519	116382525	100	-	.	Parent=comp153930_c0_seq1.mrna1;Target=comp153930_c0_seq1 310 304 .
Chr1	stalkie_big_nohaplotig	exon	116385659	116385663	100	-	.	Parent=comp153930_c0_seq1.mrna1;Target=comp153930_c0_seq1 303 299 .
Chr1	stalkie_big_nohaplotig	exon	116385771	116385777	100	-	.	Parent=comp153930_c0_seq1.mrna1;Target=comp153930_c0_seq1 298 292 .
Chr1	stalkie_big_nohaplotig	exon	118080564	118080795	95	-	.	Parent=comp153930_c0_seq1.mrna1;Target=comp153930_c0_seq1 291 57 .
Chr1	stalkie_big_nohaplotig	CDS	118080736	118080795	.	-	0	Parent=comp153930_c0_seq1.mrna1
Chr1	gffcl	locus	116384992	116385280	.	+	.	ID=RLOC_00010438;geneIDs=comp81313_c0_seq1.path1;transcripts=comp81313_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116384992	116385280	.	+	.	ID=comp81313_c0_seq1.mrna1;geneID=comp81313_c0_seq1.path1;Name=comp81313_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.7;matches=289;mismatches=0;indels=1;unknowns=0;Target=comp81313_c0_seq1 295 6 .;CDS_Target=comp81313_c0_seq1 57 7 .;locus=RLOC_00010438
Chr1	stalkie_big_nohaplotig	exon	116384992	116385280	99	+	.	Parent=comp81313_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	116384993	116385042	.	+	0	Parent=comp81313_c0_seq1.mrna1
Chr1	gffcl	locus	116387807	116388023	.	-	.	ID=RLOC_00010439;geneIDs=comp146887_c0_seq1.path2;transcripts=comp146887_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	116387807	116388023	.	-	.	ID=comp146887_c0_seq1.mrna2;geneID=comp146887_c0_seq1.path2;Name=comp146887_c0_seq1;Dir=indeterminatecoverage=81.9;identity=97.7;matches=212;mismatches=5;indels=0;unknowns=0;Target=comp146887_c0_seq1 265 49 .;CDS_Target=comp146887_c0_seq1 218 51 .;locus=RLOC_00010439
Chr1	stalkie_big_nohaplotig	exon	116387807	116388023	97	-	.	Parent=comp146887_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	116387854	116388021	.	-	0	Parent=comp146887_c0_seq1.mrna2
Chr1	gffcl	locus	116388089	116389312	.	-	.	ID=RLOC_00010440;geneIDs=comp158429_c0_seq1.path1;transcripts=comp158429_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116388089	116389312	.	-	.	ID=comp158429_c0_seq1.mrna1;geneID=comp158429_c0_seq1.path1;Name=comp158429_c0_seq1;Dir=indeterminatecoverage=99.9;identity=95.3;matches=1153;mismatches=52;indels=5;unknowns=0;Target=comp158429_c0_seq1 466 296 .;locus=RLOC_00010440
Chr1	stalkie_big_nohaplotig	exon	116388089	116388278	95	-	.	Parent=comp158429_c0_seq1.mrna1;Target=comp158429_c0_seq1 1213 1024 .
Chr1	stalkie_big_nohaplotig	exon	116388298	116389312	95	-	.	Parent=comp158429_c0_seq1.mrna1;Target=comp158429_c0_seq1 1020 1 .
Chr1	stalkie_big_nohaplotig	CDS	116388847	116389017	.	-	0	Parent=comp158429_c0_seq1.mrna1
Chr1	gffcl	locus	116500756	116501428	.	+	.	ID=RLOC_00010441;geneIDs=comp148441_c0_seq1.path1;transcripts=comp148441_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116500756	116501428	.	+	.	ID=comp148441_c0_seq1.mrna1;geneID=comp148441_c0_seq1.path1;Name=comp148441_c0_seq1;Dir=sensecoverage=99.3;identity=98.0;matches=584;mismatches=12;indels=0;unknowns=0;locus=RLOC_00010441
Chr1	stalkie_big_nohaplotig	exon	116500756	116500869	96	+	.	Parent=comp148441_c0_seq1.mrna1;Target=comp148441_c0_seq1 1 114 +
Chr1	stalkie_big_nohaplotig	exon	116500887	116501050	98	+	.	Parent=comp148441_c0_seq1.mrna1;Target=comp148441_c0_seq1 115 278 +
Chr1	stalkie_big_nohaplotig	exon	116501111	116501428	98	+	.	Parent=comp148441_c0_seq1.mrna1;Target=comp148441_c0_seq1 279 596 +
Chr1	stalkie_big_nohaplotig	CDS	116500891	116501050	.	+	0	Parent=comp148441_c0_seq1.mrna1;Target=comp148441_c0_seq1 119 278 +
Chr1	stalkie_big_nohaplotig	CDS	116501111	116501319	.	+	2	Parent=comp148441_c0_seq1.mrna1;Target=comp148441_c0_seq1 279 487 +
Chr1	gffcl	locus	116548654	116549337	.	-	.	ID=RLOC_00010442;geneIDs=comp144654_c0_seq1.path1;transcripts=comp144654_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116548654	116549337	.	-	.	ID=comp144654_c0_seq1.mrna1;geneID=comp144654_c0_seq1.path1;Name=comp144654_c0_seq1;Dir=indeterminatecoverage=88.3;identity=100.0;matches=684;mismatches=0;indels=0;unknowns=0;Target=comp144654_c0_seq1 775 92 .;CDS_Target=comp144654_c0_seq1 432 295 .;locus=RLOC_00010442
Chr1	stalkie_big_nohaplotig	exon	116548654	116549337	100	-	.	Parent=comp144654_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	116548997	116549134	.	-	0	Parent=comp144654_c0_seq1.mrna1
Chr1	gffcl	locus	116550095	116550479	.	-	.	ID=RLOC_00010443;geneIDs=comp147745_c0_seq1.path2;transcripts=comp147745_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	116550095	116550479	.	-	.	ID=comp147745_c0_seq1.mrna2;geneID=comp147745_c0_seq1.path2;Name=comp147745_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.3;matches=367;mismatches=14;indels=4;unknowns=0;Target=comp147745_c0_seq1 381 1 .;CDS_Target=comp147745_c0_seq1 81 37 .;locus=RLOC_00010443
Chr1	stalkie_big_nohaplotig	exon	116550095	116550479	95	-	.	Parent=comp147745_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	116550398	116550442	.	-	0	Parent=comp147745_c0_seq1.mrna2
Chr1	gffcl	locus	116550712	116551189	.	-	.	ID=RLOC_00010444;geneIDs=comp109056_c0_seq1.path1,comp1194129_c0_seq1.path1;transcripts=comp109056_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116550933	116551189	.	-	.	ID=comp109056_c0_seq1.mrna1;geneID=comp109056_c0_seq1.path1;Name=comp109056_c0_seq1;Dir=indeterminatecoverage=78.0;identity=99.2;matches=255;mismatches=1;indels=1;unknowns=0;Target=comp109056_c0_seq1 273 18 .;CDS_Target=comp109056_c0_seq1 133 80 .;locus=RLOC_00010444
Chr1	stalkie_big_nohaplotig	exon	116550933	116551189	99	-	.	Parent=comp109056_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	116551074	116551127	.	-	0	Parent=comp109056_c0_seq1.mrna1
Chr1	gffcl	locus	116551617	116551746	.	+	.	ID=RLOC_00010445;geneIDs=comp161205_c0_seq1.path2;transcripts=comp161205_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	116551617	116551746	.	+	.	ID=comp161205_c0_seq1.mrna2;geneID=comp161205_c0_seq1.path2;Name=comp161205_c0_seq1;Dir=indeterminatecoverage=7.7;identity=100.0;matches=130;mismatches=0;indels=0;unknowns=0;Target=comp161205_c0_seq1 1662 1533 .;locus=RLOC_00010445
Chr1	stalkie_big_nohaplotig	exon	116551617	116551746	100	+	.	Parent=comp161205_c0_seq1.mrna2
Chr1	gffcl	locus	116552351	116552861	.	+	.	ID=RLOC_00010446;geneIDs=comp136887_c0_seq1.path1;transcripts=comp136887_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116552351	116552861	.	+	.	ID=comp136887_c0_seq1.mrna1;geneID=comp136887_c0_seq1.path1;Name=comp136887_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=507;mismatches=3;indels=1;unknowns=0;Target=comp136887_c0_seq1 510 1 .;CDS_Target=comp136887_c0_seq1 84 1 .;locus=RLOC_00010446
Chr1	stalkie_big_nohaplotig	exon	116552351	116552861	99	+	.	Parent=comp136887_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	116552351	116552434	.	+	0	Parent=comp136887_c0_seq1.mrna1
Chr1	gffcl	locus	116555257	116555928	.	-	.	ID=RLOC_00010447;geneIDs=comp154156_c0_seq1.path1;transcripts=comp154156_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116555257	116555928	.	-	.	ID=comp154156_c0_seq1.mrna1;geneID=comp154156_c0_seq1.path1;Name=comp154156_c0_seq1;Dir=indeterminatecoverage=93.0;identity=99.4;matches=668;mismatches=1;indels=3;unknowns=0;Target=comp154156_c0_seq1 719 51 .;CDS_Target=comp154156_c0_seq1 518 435 .;locus=RLOC_00010447
Chr1	stalkie_big_nohaplotig	exon	116555257	116555928	99	-	.	Parent=comp154156_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	116555458	116555541	.	-	0	Parent=comp154156_c0_seq1.mrna1
Chr1	gffcl	locus	116556509	117180487	.	.	.	ID=RLOC_00010448;geneIDs=FBgn0263111.1.path1,comp141738_c0_seq1.path1,comp147745_c0_seq1.path1,comp162780_c3_seq1.path1;transcripts=comp162780_c3_seq1.mrna1,FBgn0263111.1.mrna1,comp141738_c0_seq1.mrna1,comp147745_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116556509	117180487	.	-	.	ID=comp162780_c3_seq1.mrna1;geneID=comp162780_c3_seq1.path1;Name=comp162780_c3_seq1;Dir=indeterminatecoverage=84.9;identity=95.9;matches=7604;mismatches=139;indels=188;unknowns=0;locus=RLOC_00010448
Chr1	stalkie_big_nohaplotig	exon	116556509	116557064	99	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 13791 13236 .
Chr1	stalkie_big_nohaplotig	exon	116557138	116557361	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 13235 13012 .
Chr1	stalkie_big_nohaplotig	exon	116558795	116558946	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 13011 12860 .
Chr1	stalkie_big_nohaplotig	exon	116562365	116562541	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 12859 12683 .
Chr1	stalkie_big_nohaplotig	exon	116567277	116567440	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 12682 12519 .
Chr1	stalkie_big_nohaplotig	exon	116567631	116567752	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 12518 12397 .
Chr1	stalkie_big_nohaplotig	exon	116571196	116571232	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 12396 12360 .
Chr1	stalkie_big_nohaplotig	exon	116573037	116573245	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 12359 12151 .
Chr1	stalkie_big_nohaplotig	exon	116584007	116584215	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 12150 11942 .
Chr1	stalkie_big_nohaplotig	exon	116584327	116584529	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 11941 11739 .
Chr1	stalkie_big_nohaplotig	exon	116585450	116585728	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 11738 11460 .
Chr1	stalkie_big_nohaplotig	exon	116589380	116589474	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 11459 11365 .
Chr1	stalkie_big_nohaplotig	exon	116592453	116592544	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 11364 11273 .
Chr1	stalkie_big_nohaplotig	exon	116596439	116596621	99	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 11272 11090 .
Chr1	stalkie_big_nohaplotig	exon	116600738	116600740	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 11089 11087 .
Chr1	stalkie_big_nohaplotig	exon	116607120	116607134	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 11086 11072 .
Chr1	stalkie_big_nohaplotig	exon	116610548	116610553	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 11071 11066 .
Chr1	stalkie_big_nohaplotig	exon	116611750	116611833	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 11065 10982 .
Chr1	stalkie_big_nohaplotig	exon	116614799	116614909	99	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 10981 10871 .
Chr1	stalkie_big_nohaplotig	exon	116616458	116616622	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 10870 10706 .
Chr1	stalkie_big_nohaplotig	exon	116620032	116620233	99	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 10705 10504 .
Chr1	stalkie_big_nohaplotig	exon	116620374	116620517	98	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 10503 10360 .
Chr1	stalkie_big_nohaplotig	exon	116629070	116629633	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 10359 9796 .
Chr1	stalkie_big_nohaplotig	exon	116634789	116634797	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 9783 9775 .
Chr1	stalkie_big_nohaplotig	exon	116642093	116642097	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 9774 9770 .
Chr1	stalkie_big_nohaplotig	exon	116643643	116643645	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 9762 9760 .
Chr1	stalkie_big_nohaplotig	exon	116643728	116643739	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 9350 9339 .
Chr1	stalkie_big_nohaplotig	exon	116651634	116651645	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 9338 9327 .
Chr1	stalkie_big_nohaplotig	exon	116655379	116655387	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 9313 9305 .
Chr1	stalkie_big_nohaplotig	exon	116660673	116660675	28	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 9304 9298 .
Chr1	stalkie_big_nohaplotig	exon	116668178	116668187	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 8942 8933 .
Chr1	stalkie_big_nohaplotig	exon	116673736	116673741	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 8932 8927 .
Chr1	stalkie_big_nohaplotig	exon	116681556	116681559	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 8926 8923 .
Chr1	stalkie_big_nohaplotig	exon	116686142	116686149	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 8919 8912 .
Chr1	stalkie_big_nohaplotig	exon	116688968	116688977	90	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 8900 8890 .
Chr1	stalkie_big_nohaplotig	exon	116697110	116697119	90	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 8889 8880 .
Chr1	stalkie_big_nohaplotig	exon	116707354	116707357	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 8879 8876 .
Chr1	stalkie_big_nohaplotig	exon	116709618	116709627	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 8501 8492 .
Chr1	stalkie_big_nohaplotig	exon	116717212	116717214	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 8491 8489 .
Chr1	stalkie_big_nohaplotig	exon	116725217	116725218	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 8488 8487 .
Chr1	stalkie_big_nohaplotig	exon	116725471	116725478	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 8403 8396 .
Chr1	stalkie_big_nohaplotig	exon	116734770	116734773	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 8395 8392 .
Chr1	stalkie_big_nohaplotig	exon	116747295	116747303	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 8063 8055 .
Chr1	stalkie_big_nohaplotig	exon	116747319	116747328	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 8000 7991 .
Chr1	stalkie_big_nohaplotig	exon	116747405	116747417	84	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 7153 7141 .
Chr1	stalkie_big_nohaplotig	exon	116751139	116751144	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 7140 7135 .
Chr1	stalkie_big_nohaplotig	exon	116759042	116759049	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 7134 7127 .
Chr1	stalkie_big_nohaplotig	exon	116764849	116764904	50	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 7126 7079 .
Chr1	stalkie_big_nohaplotig	exon	116769840	116769843	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 7078 7075 .
Chr1	stalkie_big_nohaplotig	exon	116776411	116776413	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 7074 7072 .
Chr1	stalkie_big_nohaplotig	exon	116785480	116785543	53	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 7071 7011 .
Chr1	stalkie_big_nohaplotig	exon	116792929	116792935	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 7010 7004 .
Chr1	stalkie_big_nohaplotig	exon	116800172	116800175	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 7003 7000 .
Chr1	stalkie_big_nohaplotig	exon	116805420	116805431	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 6999 6988 .
Chr1	stalkie_big_nohaplotig	exon	116813210	116813219	47	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 6987 6967 .
Chr1	stalkie_big_nohaplotig	exon	116814366	116814401	33	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 6965 6954 .
Chr1	stalkie_big_nohaplotig	exon	116815640	116815651	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 6921 6910 .
Chr1	stalkie_big_nohaplotig	exon	116817311	116817344	38	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 6909 6894 .
Chr1	stalkie_big_nohaplotig	exon	116823626	116823640	86	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 6879 6865 .
Chr1	stalkie_big_nohaplotig	exon	116827118	116827173	50	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 6864 6815 .
Chr1	stalkie_big_nohaplotig	exon	116828322	116828328	35	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 6814 6795 .
Chr1	stalkie_big_nohaplotig	exon	116834137	116834455	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 6374 6056 .
Chr1	stalkie_big_nohaplotig	exon	116834539	116834678	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 6055 5916 .
Chr1	stalkie_big_nohaplotig	exon	116835501	116835601	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 5915 5815 .
Chr1	stalkie_big_nohaplotig	exon	116839544	116839699	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 5814 5659 .
Chr1	stalkie_big_nohaplotig	exon	116839777	116839997	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 5658 5438 .
Chr1	stalkie_big_nohaplotig	exon	116843143	116843246	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 5437 5334 .
Chr1	stalkie_big_nohaplotig	exon	116847192	116847307	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 5333 5218 .
Chr1	stalkie_big_nohaplotig	exon	116847487	116847546	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 5217 5158 .
Chr1	stalkie_big_nohaplotig	exon	116847629	116847733	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 5157 5053 .
Chr1	stalkie_big_nohaplotig	exon	116852826	116853023	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 5052 4855 .
Chr1	stalkie_big_nohaplotig	exon	116853207	116853720	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 4854 4341 .
Chr1	stalkie_big_nohaplotig	exon	116862855	116863190	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 4340 4005 .
Chr1	stalkie_big_nohaplotig	exon	116866305	116866868	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 4004 3441 .
Chr1	stalkie_big_nohaplotig	exon	116878127	116878134	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 3440 3433 .
Chr1	stalkie_big_nohaplotig	exon	116883975	116884028	43	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 3432 3366 .
Chr1	stalkie_big_nohaplotig	exon	116899507	116899508	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 3365 3364 .
Chr1	stalkie_big_nohaplotig	exon	116906285	116906287	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 3363 3361 .
Chr1	stalkie_big_nohaplotig	exon	116906293	116906295	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 3334 3332 .
Chr1	stalkie_big_nohaplotig	exon	116909390	116909395	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 3331 3326 .
Chr1	stalkie_big_nohaplotig	exon	116924074	116924082	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 3254 3246 .
Chr1	stalkie_big_nohaplotig	exon	116929761	116929764	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 3245 3242 .
Chr1	stalkie_big_nohaplotig	exon	116930871	116930875	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 3241 3237 .
Chr1	stalkie_big_nohaplotig	exon	116933380	116933388	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 3236 3228 .
Chr1	stalkie_big_nohaplotig	exon	116936753	116936760	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 3227 3220 .
Chr1	stalkie_big_nohaplotig	exon	116939403	116939443	60	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 3219 3190 .
Chr1	stalkie_big_nohaplotig	exon	116941623	116941626	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 3189 3186 .
Chr1	stalkie_big_nohaplotig	exon	116949670	116949679	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 2659 2650 .
Chr1	stalkie_big_nohaplotig	exon	116949687	116949692	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 2607 2602 .
Chr1	stalkie_big_nohaplotig	exon	116956933	116956939	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 2601 2595 .
Chr1	stalkie_big_nohaplotig	exon	116975388	116975398	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 2567 2557 .
Chr1	stalkie_big_nohaplotig	exon	116981819	116981821	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 2556 2554 .
Chr1	stalkie_big_nohaplotig	exon	116985427	116985464	65	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 2553 2511 .
Chr1	stalkie_big_nohaplotig	exon	117015999	117016009	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 2481 2471 .
Chr1	stalkie_big_nohaplotig	exon	117029281	117029283	10	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 2470 2442 .
Chr1	stalkie_big_nohaplotig	exon	117033765	117033775	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 2438 2428 .
Chr1	stalkie_big_nohaplotig	exon	117052909	117052918	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 2316 2307 .
Chr1	stalkie_big_nohaplotig	exon	117061054	117061057	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 2222 2219 .
Chr1	stalkie_big_nohaplotig	exon	117100289	117100295	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 2218 2212 .
Chr1	stalkie_big_nohaplotig	exon	117111618	117111654	51	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 2211 2156 .
Chr1	stalkie_big_nohaplotig	exon	117141785	117141829	63	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 2154 2112 .
Chr1	stalkie_big_nohaplotig	exon	117146328	117146336	77	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 2111 2103 .
Chr1	stalkie_big_nohaplotig	exon	117165707	117165710	100	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 2102 2099 .
Chr1	stalkie_big_nohaplotig	exon	117180476	117180487	54	-	.	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 2098 2077 .
Chr1	stalkie_big_nohaplotig	CDS	116556914	116557064	.	-	1	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 13386 13236 .
Chr1	stalkie_big_nohaplotig	CDS	116557138	116557361	.	-	0	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 13235 13012 .
Chr1	stalkie_big_nohaplotig	CDS	116558795	116558946	.	-	2	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 13011 12860 .
Chr1	stalkie_big_nohaplotig	CDS	116562365	116562541	.	-	2	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 12859 12683 .
Chr1	stalkie_big_nohaplotig	CDS	116567277	116567440	.	-	1	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 12682 12519 .
Chr1	stalkie_big_nohaplotig	CDS	116567631	116567752	.	-	0	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 12518 12397 .
Chr1	stalkie_big_nohaplotig	CDS	116571196	116571232	.	-	1	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 12396 12360 .
Chr1	stalkie_big_nohaplotig	CDS	116573037	116573245	.	-	0	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 12359 12151 .
Chr1	stalkie_big_nohaplotig	CDS	116584007	116584215	.	-	2	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 12150 11942 .
Chr1	stalkie_big_nohaplotig	CDS	116584327	116584529	.	-	1	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 11941 11739 .
Chr1	stalkie_big_nohaplotig	CDS	116585450	116585728	.	-	1	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 11738 11460 .
Chr1	stalkie_big_nohaplotig	CDS	116589380	116589393	.	-	0	Parent=comp162780_c3_seq1.mrna1;Target=comp162780_c3_seq1 11459 11446 .
Chr1	stalkie_big_nohaplotig	mRNA	116556917	116708276	.	-	.	ID=FBgn0263111.1.mrna1;geneID=FBgn0263111.1.path1;Name=FBgn0263111.1;Dir=sensecoverage=76.9;identity=97.2;matches=3651;mismatches=46;indels=60;unknowns=0;locus=RLOC_00010448
Chr1	stalkie_big_nohaplotig	exon	116556917	116557064	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 5979 6126 +
Chr1	stalkie_big_nohaplotig	exon	116557138	116557361	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 5755 5978 +
Chr1	stalkie_big_nohaplotig	exon	116558795	116558946	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 5603 5754 +
Chr1	stalkie_big_nohaplotig	exon	116562365	116562553	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 5414 5602 +
Chr1	stalkie_big_nohaplotig	exon	116567277	116567440	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 5250 5413 +
Chr1	stalkie_big_nohaplotig	exon	116567631	116567752	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 5128 5249 +
Chr1	stalkie_big_nohaplotig	exon	116571223	116571232	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 5118 5127 +
Chr1	stalkie_big_nohaplotig	exon	116573037	116573245	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 4909 5117 +
Chr1	stalkie_big_nohaplotig	exon	116584007	116584215	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 4700 4908 +
Chr1	stalkie_big_nohaplotig	exon	116584327	116584529	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 4497 4699 +
Chr1	stalkie_big_nohaplotig	exon	116585450	116585728	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 4218 4496 +
Chr1	stalkie_big_nohaplotig	exon	116589380	116589474	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 4123 4217 +
Chr1	stalkie_big_nohaplotig	exon	116596439	116596621	99	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 3940 4122 +
Chr1	stalkie_big_nohaplotig	exon	116600738	116600740	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 3937 3939 +
Chr1	stalkie_big_nohaplotig	exon	116607120	116607134	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 3922 3936 +
Chr1	stalkie_big_nohaplotig	exon	116610548	116610553	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 3916 3921 +
Chr1	stalkie_big_nohaplotig	exon	116611750	116611833	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 3832 3915 +
Chr1	stalkie_big_nohaplotig	exon	116614799	116614909	99	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 3721 3831 +
Chr1	stalkie_big_nohaplotig	exon	116616458	116616622	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 3556 3720 +
Chr1	stalkie_big_nohaplotig	exon	116620032	116620233	99	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 3354 3555 +
Chr1	stalkie_big_nohaplotig	exon	116620374	116620517	98	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 3210 3353 +
Chr1	stalkie_big_nohaplotig	exon	116629070	116629633	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 2646 3209 +
Chr1	stalkie_big_nohaplotig	exon	116634789	116634797	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 2625 2633 +
Chr1	stalkie_big_nohaplotig	exon	116641657	116641807	48	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 2514 2620 +
Chr1	stalkie_big_nohaplotig	exon	116660831	116660841	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 2476 2486 +
Chr1	stalkie_big_nohaplotig	exon	116663198	116663221	43	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 2181 2204 +
Chr1	stalkie_big_nohaplotig	exon	116668178	116668187	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 1783 1792 +
Chr1	stalkie_big_nohaplotig	exon	116673736	116673741	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 1777 1782 +
Chr1	stalkie_big_nohaplotig	exon	116681556	116681559	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 1773 1776 +
Chr1	stalkie_big_nohaplotig	exon	116686142	116686149	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 1762 1769 +
Chr1	stalkie_big_nohaplotig	exon	116688968	116688979	84	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 1738 1750 +
Chr1	stalkie_big_nohaplotig	exon	116703276	116703285	60	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 1731 1737 +
Chr1	stalkie_big_nohaplotig	exon	116705147	116705155	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 1445 1453 +
Chr1	stalkie_big_nohaplotig	exon	116705177	116705184	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 1424 1431 +
Chr1	stalkie_big_nohaplotig	exon	116708271	116708276	100	-	.	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 1418 1423 +
Chr1	stalkie_big_nohaplotig	CDS	116556917	116557064	.	-	1	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 5979 6126 +
Chr1	stalkie_big_nohaplotig	CDS	116557138	116557361	.	-	0	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 5755 5978 +
Chr1	stalkie_big_nohaplotig	CDS	116558795	116558946	.	-	2	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 5603 5754 +
Chr1	stalkie_big_nohaplotig	CDS	116562365	116562553	.	-	2	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 5414 5602 +
Chr1	stalkie_big_nohaplotig	CDS	116567277	116567440	.	-	1	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 5250 5413 +
Chr1	stalkie_big_nohaplotig	CDS	116567631	116567752	.	-	0	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 5128 5249 +
Chr1	stalkie_big_nohaplotig	CDS	116571223	116571232	.	-	1	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 5118 5127 +
Chr1	stalkie_big_nohaplotig	CDS	116573037	116573245	.	-	0	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 4909 5117 +
Chr1	stalkie_big_nohaplotig	CDS	116584007	116584215	.	-	2	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 4700 4908 +
Chr1	stalkie_big_nohaplotig	CDS	116584327	116584529	.	-	1	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 4497 4699 +
Chr1	stalkie_big_nohaplotig	CDS	116585450	116585728	.	-	1	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 4218 4496 +
Chr1	stalkie_big_nohaplotig	CDS	116589380	116589474	.	-	0	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 4123 4217 +
Chr1	stalkie_big_nohaplotig	CDS	116596439	116596621	.	-	0	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 3940 4122 +
Chr1	stalkie_big_nohaplotig	CDS	116600738	116600740	.	-	0	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 3937 3939 +
Chr1	stalkie_big_nohaplotig	CDS	116607120	116607134	.	-	0	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 3922 3936 +
Chr1	stalkie_big_nohaplotig	CDS	116610548	116610553	.	-	0	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 3916 3921 +
Chr1	stalkie_big_nohaplotig	CDS	116611750	116611833	.	-	0	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 3832 3915 +
Chr1	stalkie_big_nohaplotig	CDS	116614799	116614909	.	-	0	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 3721 3831 +
Chr1	stalkie_big_nohaplotig	CDS	116616458	116616622	.	-	0	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 3556 3720 +
Chr1	stalkie_big_nohaplotig	CDS	116620032	116620233	.	-	1	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 3354 3555 +
Chr1	stalkie_big_nohaplotig	CDS	116620374	116620517	.	-	1	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 3210 3353 +
Chr1	stalkie_big_nohaplotig	CDS	116629070	116629578	.	-	0	Parent=FBgn0263111.1.mrna1;Target=FBgn0263111.1 2701 3209 +
Chr1	stalkie_big_nohaplotig	mRNA	116607064	116607312	.	+	.	ID=comp141738_c0_seq1.mrna1;geneID=comp141738_c0_seq1.path1;Name=comp141738_c0_seq1;Dir=indeterminatecoverage=94.7;identity=100.0;matches=249;mismatches=0;indels=0;unknowns=0;Target=comp141738_c0_seq1 249 1 .;CDS_Target=comp141738_c0_seq1 77 3 .;locus=RLOC_00010448
Chr1	stalkie_big_nohaplotig	exon	116607064	116607312	100	+	.	Parent=comp141738_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	116607066	116607140	.	+	0	Parent=comp141738_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116655351	116655734	.	-	.	ID=comp147745_c0_seq1.mrna1;geneID=comp147745_c0_seq1.path1;Name=comp147745_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.3;matches=366;mismatches=15;indels=3;unknowns=0;Target=comp147745_c0_seq1 381 1 .;CDS_Target=comp147745_c0_seq1 81 37 .;locus=RLOC_00010448
Chr1	stalkie_big_nohaplotig	exon	116655351	116655734	95	-	.	Parent=comp147745_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	116655653	116655697	.	-	0	Parent=comp147745_c0_seq1.mrna1
Chr1	gffcl	locus	116621124	116631846	.	+	.	ID=RLOC_00010449;geneIDs=comp146183_c0_seq1.path1;transcripts=comp146183_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116621124	116631846	.	+	.	ID=comp146183_c0_seq1.mrna1;geneID=comp146183_c0_seq1.path1;Name=comp146183_c0_seq1;Dir=indeterminatecoverage=96.3;identity=99.0;matches=311;mismatches=3;indels=0;unknowns=26;locus=RLOC_00010449
Chr1	stalkie_big_nohaplotig	exon	116621124	116621145	100	+	.	Parent=comp146183_c0_seq1.mrna1;Target=comp146183_c0_seq1 41 20 .
Chr1	stalkie_big_nohaplotig	exon	116621378	116621379	100	+	.	Parent=comp146183_c0_seq1.mrna1;Target=comp146183_c0_seq1 43 42 .
Chr1	stalkie_big_nohaplotig	exon	116622012	116622021	100	+	.	Parent=comp146183_c0_seq1.mrna1;Target=comp146183_c0_seq1 53 44 .
Chr1	stalkie_big_nohaplotig	exon	116622069	116622077	100	+	.	Parent=comp146183_c0_seq1.mrna1;Target=comp146183_c0_seq1 163 155 .
Chr1	stalkie_big_nohaplotig	exon	116622146	116622161	93	+	.	Parent=comp146183_c0_seq1.mrna1;Target=comp146183_c0_seq1 179 164 .
Chr1	stalkie_big_nohaplotig	exon	116622170	116622182	84	+	.	Parent=comp146183_c0_seq1.mrna1;Target=comp146183_c0_seq1 239 227 .
Chr1	stalkie_big_nohaplotig	exon	116622363	116622372	100	+	.	Parent=comp146183_c0_seq1.mrna1;Target=comp146183_c0_seq1 249 240 .
Chr1	stalkie_big_nohaplotig	exon	116628247	116628256	100	+	.	Parent=comp146183_c0_seq1.mrna1;Target=comp146183_c0_seq1 274 265 .
Chr1	stalkie_big_nohaplotig	exon	116631601	116631846	100	+	.	Parent=comp146183_c0_seq1.mrna1;Target=comp146183_c0_seq1 520 275 .
Chr1	stalkie_big_nohaplotig	CDS	116621126	116621145	.	+	0	Parent=comp146183_c0_seq1.mrna1;Target=comp146183_c0_seq1 41 22 .
Chr1	stalkie_big_nohaplotig	CDS	116621378	116621379	.	+	1	Parent=comp146183_c0_seq1.mrna1;Target=comp146183_c0_seq1 43 42 .
Chr1	stalkie_big_nohaplotig	CDS	116622012	116622021	.	+	2	Parent=comp146183_c0_seq1.mrna1;Target=comp146183_c0_seq1 53 44 .
Chr1	gffcl	locus	116644645	116651142	.	-	.	ID=RLOC_00010450;geneIDs=FBgn0030358.path1,comp163631_c1_seq1.path1;transcripts=FBgn0030358.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116644645	116651118	.	-	.	ID=FBgn0030358.mrna1;geneID=FBgn0030358.path1;Name=FBgn0030358;Dir=sensecoverage=99.9;identity=99.4;matches=1371;mismatches=8;indels=0;unknowns=0;locus=RLOC_00010450
Chr1	stalkie_big_nohaplotig	exon	116644645	116645404	99	-	.	Parent=FBgn0030358.mrna1;Target=FBgn0030358 620 1379 +
Chr1	stalkie_big_nohaplotig	exon	116646716	116646908	100	-	.	Parent=FBgn0030358.mrna1;Target=FBgn0030358 427 619 +
Chr1	stalkie_big_nohaplotig	exon	116650624	116650860	99	-	.	Parent=FBgn0030358.mrna1;Target=FBgn0030358 190 426 +
Chr1	stalkie_big_nohaplotig	exon	116650930	116651118	100	-	.	Parent=FBgn0030358.mrna1;Target=FBgn0030358 1 189 +
Chr1	stalkie_big_nohaplotig	CDS	116644647	116645404	.	-	2	Parent=FBgn0030358.mrna1;Target=FBgn0030358 620 1377 +
Chr1	stalkie_big_nohaplotig	CDS	116646716	116646908	.	-	0	Parent=FBgn0030358.mrna1;Target=FBgn0030358 427 619 +
Chr1	stalkie_big_nohaplotig	CDS	116650624	116650860	.	-	0	Parent=FBgn0030358.mrna1;Target=FBgn0030358 190 426 +
Chr1	stalkie_big_nohaplotig	CDS	116650930	116651118	.	-	0	Parent=FBgn0030358.mrna1;Target=FBgn0030358 1 189 +
Chr1	gffcl	locus	116655967	116656439	.	-	.	ID=RLOC_00010451;geneIDs=comp109056_c0_seq1.path2,comp1194129_c0_seq1.path2;transcripts=comp109056_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	116656188	116656439	.	-	.	ID=comp109056_c0_seq1.mrna2;geneID=comp109056_c0_seq1.path2;Name=comp109056_c0_seq1;Dir=indeterminatecoverage=76.5;identity=99.6;matches=251;mismatches=0;indels=1;unknowns=0;Target=comp109056_c0_seq1 273 23 .;CDS_Target=comp109056_c0_seq1 133 80 .;locus=RLOC_00010451
Chr1	stalkie_big_nohaplotig	exon	116656188	116656439	99	-	.	Parent=comp109056_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	116656329	116656382	.	-	0	Parent=comp109056_c0_seq1.mrna2
Chr1	gffcl	locus	116733439	116733955	.	-	.	ID=RLOC_00010452;geneIDs=comp159580_c0_seq1.path1;transcripts=comp159580_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116733439	116733955	.	-	.	ID=comp159580_c0_seq1.mrna1;geneID=comp159580_c0_seq1.path1;Name=comp159580_c0_seq1;Dir=indeterminatecoverage=56.7;identity=94.5;matches=461;mismatches=24;indels=3;unknowns=0;Target=comp159580_c0_seq1 189 70 .;locus=RLOC_00010452
Chr1	stalkie_big_nohaplotig	exon	116733439	116733748	93	-	.	Parent=comp159580_c0_seq1.mrna1;Target=comp159580_c0_seq1 530 221 .
Chr1	stalkie_big_nohaplotig	exon	116733781	116733955	96	-	.	Parent=comp159580_c0_seq1.mrna1;Target=comp159580_c0_seq1 205 28 .
Chr1	stalkie_big_nohaplotig	CDS	116733796	116733913	.	-	0	Parent=comp159580_c0_seq1.mrna1
Chr1	gffcl	locus	116804030	116804307	.	+	.	ID=RLOC_00010453;geneIDs=comp117105_c0_seq1.path1;transcripts=comp117105_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116804030	116804307	.	+	.	ID=comp117105_c0_seq1.mrna1;geneID=comp117105_c0_seq1.path1;Name=comp117105_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=277;mismatches=1;indels=0;unknowns=0;Target=comp117105_c0_seq1 278 1 .;CDS_Target=comp117105_c0_seq1 266 165 .;locus=RLOC_00010453
Chr1	stalkie_big_nohaplotig	exon	116804030	116804307	99	+	.	Parent=comp117105_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	116804194	116804295	.	+	0	Parent=comp117105_c0_seq1.mrna1
Chr1	gffcl	locus	116807693	116919974	.	+	.	ID=RLOC_00010454;geneIDs=comp138861_c0_seq1.path1;transcripts=comp138861_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116807693	116919974	.	+	.	ID=comp138861_c0_seq1.mrna1;geneID=comp138861_c0_seq1.path1;Name=comp138861_c0_seq1;Dir=antisensecoverage=97.5;identity=98.6;matches=574;mismatches=6;indels=2;unknowns=0;locus=RLOC_00010454
Chr1	stalkie_big_nohaplotig	exon	116807693	116807852	97	+	.	Parent=comp138861_c0_seq1.mrna1;Target=comp138861_c0_seq1 438 597 -
Chr1	stalkie_big_nohaplotig	exon	116919555	116919974	99	+	.	Parent=comp138861_c0_seq1.mrna1;Target=comp138861_c0_seq1 16 437 -
Chr1	stalkie_big_nohaplotig	CDS	116807844	116807852	.	+	0	Parent=comp138861_c0_seq1.mrna1;Target=comp138861_c0_seq1 438 446 .
Chr1	stalkie_big_nohaplotig	CDS	116919555	116919725	.	+	0	Parent=comp138861_c0_seq1.mrna1;Target=comp138861_c0_seq1 267 437 .
Chr1	gffcl	locus	116811498	116811857	.	+	.	ID=RLOC_00010455;geneIDs=comp151788_c0_seq1.path1;transcripts=comp151788_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116811498	116811857	.	+	.	ID=comp151788_c0_seq1.mrna1;geneID=comp151788_c0_seq1.path1;Name=comp151788_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.6;matches=344;mismatches=16;indels=0;unknowns=0;Target=comp151788_c0_seq1 360 1 .;CDS_Target=comp151788_c0_seq1 250 182 .;locus=RLOC_00010455
Chr1	stalkie_big_nohaplotig	exon	116811498	116811857	95	+	.	Parent=comp151788_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	116811679	116811747	.	+	0	Parent=comp151788_c0_seq1.mrna1
Chr1	gffcl	locus	116811888	116812598	.	-	.	ID=RLOC_00010456;geneIDs=comp156790_c0_seq1.path1;transcripts=comp156790_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116811888	116812598	.	-	.	ID=comp156790_c0_seq1.mrna1;geneID=comp156790_c0_seq1.path1;Name=comp156790_c0_seq1;Dir=indeterminatecoverage=91.2;identity=97.4;matches=698;mismatches=13;indels=6;unknowns=0;Target=comp156790_c0_seq1 717 1 .;CDS_Target=comp156790_c0_seq1 591 406 .;locus=RLOC_00010456
Chr1	stalkie_big_nohaplotig	exon	116811888	116812598	97	-	.	Parent=comp156790_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	116812014	116812199	.	-	0	Parent=comp156790_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117077512	117078070	.	-	.	ID=FBgn0001083.mrna1;geneID=FBgn0001083.path1;Name=FBgn0001083;Dir=indeterminatecoverage=34.1;identity=97.3;matches=550;mismatches=0;indels=15;unknowns=0;Target=FBgn0001083 556 1 .;CDS_Target=FBgn0001083 555 1 .;locus=RLOC_00010457
Chr1	stalkie_big_nohaplotig	exon	117077512	117078070	97	-	.	Parent=FBgn0001083.mrna1
Chr1	stalkie_big_nohaplotig	CDS	117077513	117078070	.	-	0	Parent=FBgn0001083.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117078138	117082143	.	-	.	ID=comp143171_c0_seq1.mrna1;geneID=comp143171_c0_seq1.path1;Name=comp143171_c0_seq1;Dir=sensecoverage=100.0;identity=98.8;matches=427;mismatches=2;indels=3;unknowns=0;Target=comp143171_c0_seq1 2 91 +;locus=RLOC_00010457
Chr1	stalkie_big_nohaplotig	exon	117078138	117078300	96	-	.	Parent=comp143171_c0_seq1.mrna1;Target=comp143171_c0_seq1 270 429 +
Chr1	stalkie_big_nohaplotig	exon	117081875	117082143	100	-	.	Parent=comp143171_c0_seq1.mrna1;Target=comp143171_c0_seq1 1 269 +
Chr1	stalkie_big_nohaplotig	CDS	117082053	117082142	.	-	0	Parent=comp143171_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117835487	117836024	.	+	.	ID=comp117220_c0_seq1.mrna1;geneID=comp117220_c0_seq1.path1;Name=comp117220_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=532;mismatches=6;indels=0;unknowns=0;Target=comp117220_c0_seq1 538 1 .;CDS_Target=comp117220_c0_seq1 452 213 .;locus=RLOC_00010457
Chr1	stalkie_big_nohaplotig	exon	117835487	117836024	98	+	.	Parent=comp117220_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	117835699	117835938	.	+	0	Parent=comp117220_c0_seq1.mrna1
Chr1	gffcl	locus	116881837	116882984	.	-	.	ID=RLOC_00010458;geneIDs=comp135254_c0_seq1.path1;transcripts=comp135254_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	116881837	116882984	.	-	.	ID=comp135254_c0_seq1.mrna1;geneID=comp135254_c0_seq1.path1;Name=comp135254_c0_seq1;Dir=antisensecoverage=98.9;identity=99.5;matches=1080;mismatches=4;indels=1;unknowns=0;Target=comp135254_c0_seq1 284 922 .;locus=RLOC_00010458
Chr1	stalkie_big_nohaplotig	exon	116881837	116882045	100	-	.	Parent=comp135254_c0_seq1.mrna1;Target=comp135254_c0_seq1 2 210 -
Chr1	stalkie_big_nohaplotig	exon	116882110	116882984	99	-	.	Parent=comp135254_c0_seq1.mrna1;Target=comp135254_c0_seq1 211 1086 -
Chr1	stalkie_big_nohaplotig	CDS	116882182	116882820	.	-	0	Parent=comp135254_c0_seq1.mrna1
Chr1	gffcl	locus	117012063	117014547	.	-	.	ID=RLOC_00010459;geneIDs=FBgn0000808.1.path1;transcripts=FBgn0000808.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117012063	117014547	.	-	.	ID=FBgn0000808.1.mrna1;geneID=FBgn0000808.1.path1;Name=FBgn0000808.1;Dir=sensecoverage=100.0;identity=99.2;matches=1761;mismatches=15;indels=0;unknowns=0;locus=RLOC_00010459
Chr1	stalkie_big_nohaplotig	exon	117012063	117012579	99	-	.	Parent=FBgn0000808.1.mrna1;Target=FBgn0000808.1 1260 1776 +
Chr1	stalkie_big_nohaplotig	exon	117012686	117013264	99	-	.	Parent=FBgn0000808.1.mrna1;Target=FBgn0000808.1 681 1259 +
Chr1	stalkie_big_nohaplotig	exon	117013383	117013593	99	-	.	Parent=FBgn0000808.1.mrna1;Target=FBgn0000808.1 470 680 +
Chr1	stalkie_big_nohaplotig	exon	117014011	117014161	99	-	.	Parent=FBgn0000808.1.mrna1;Target=FBgn0000808.1 319 469 +
Chr1	stalkie_big_nohaplotig	exon	117014230	117014547	97	-	.	Parent=FBgn0000808.1.mrna1;Target=FBgn0000808.1 1 318 +
Chr1	stalkie_big_nohaplotig	CDS	117012063	117012579	.	-	1	Parent=FBgn0000808.1.mrna1;Target=FBgn0000808.1 1260 1776 +
Chr1	stalkie_big_nohaplotig	CDS	117012686	117013264	.	-	1	Parent=FBgn0000808.1.mrna1;Target=FBgn0000808.1 681 1259 +
Chr1	stalkie_big_nohaplotig	CDS	117013383	117013593	.	-	2	Parent=FBgn0000808.1.mrna1;Target=FBgn0000808.1 470 680 +
Chr1	stalkie_big_nohaplotig	CDS	117014011	117014161	.	-	0	Parent=FBgn0000808.1.mrna1;Target=FBgn0000808.1 319 469 +
Chr1	stalkie_big_nohaplotig	CDS	117014230	117014547	.	-	0	Parent=FBgn0000808.1.mrna1;Target=FBgn0000808.1 1 318 +
Chr1	gffcl	locus	117096712	117097217	.	-	.	ID=RLOC_00010461;geneIDs=comp132570_c0_seq1.path1;transcripts=comp132570_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117096712	117097217	.	-	.	ID=comp132570_c0_seq1.mrna1;geneID=comp132570_c0_seq1.path1;Name=comp132570_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=502;mismatches=4;indels=1;unknowns=0;Target=comp132570_c0_seq1 507 1 .;CDS_Target=comp132570_c0_seq1 497 357 .;locus=RLOC_00010461
Chr1	stalkie_big_nohaplotig	exon	117096712	117097217	99	-	.	Parent=comp132570_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	117096722	117096862	.	-	0	Parent=comp132570_c0_seq1.mrna1
Chr1	gffcl	locus	117097937	117098556	.	+	.	ID=RLOC_00010462;geneIDs=comp118192_c0_seq1.path1;transcripts=comp118192_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117097937	117098556	.	+	.	ID=comp118192_c0_seq1.mrna1;geneID=comp118192_c0_seq1.path1;Name=comp118192_c0_seq1;Dir=indeterminatecoverage=100.0;identity=80.3;matches=579;mismatches=28;indels=114;unknowns=0;Target=comp118192_c0_seq1 708 1 .;CDS_Target=comp118192_c0_seq1 307 203 .;locus=RLOC_00010462
Chr1	stalkie_big_nohaplotig	exon	117097937	117098556	80	+	.	Parent=comp118192_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	117098149	117098255	.	+	0	Parent=comp118192_c0_seq1.mrna1
Chr1	gffcl	locus	117119979	117120965	.	+	.	ID=RLOC_00010463;geneIDs=FBgn0030360.1.path1;transcripts=FBgn0030360.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117119979	117120965	.	+	.	ID=FBgn0030360.1.mrna1;geneID=FBgn0030360.1.path1;Name=FBgn0030360.1;Dir=indeterminatecoverage=55.0;identity=99.4;matches=981;mismatches=6;indels=0;unknowns=0;Target=FBgn0030360.1 987 1 .;locus=RLOC_00010463
Chr1	stalkie_big_nohaplotig	exon	117119979	117120965	99	+	.	Parent=FBgn0030360.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	117119979	117120965	.	+	0	Parent=FBgn0030360.1.mrna1
Chr1	gffcl	locus	117128757	117128809	.	+	.	ID=RLOC_00010464;geneIDs=FBgn0030800.1.path2;transcripts=FBgn0030800.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	117128757	117128809	.	+	.	ID=FBgn0030800.1.mrna2;geneID=FBgn0030800.1.path2;Name=FBgn0030800.1;Dir=indeterminatecoverage=4.5;identity=98.1;matches=52;mismatches=1;indels=0;unknowns=0;Target=FBgn0030800.1 1184 1132 .;CDS_Target=FBgn0030800.1 1182 1132 .;locus=RLOC_00010464
Chr1	stalkie_big_nohaplotig	exon	117128757	117128809	98	+	.	Parent=FBgn0030800.1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	117128757	117128807	.	+	0	Parent=FBgn0030800.1.mrna2
Chr1	gffcl	locus	117168669	117180229	.	+	.	ID=RLOC_00010465;geneIDs=FBgn0030808.1.path1,comp163750_c0_seq1.path1;transcripts=FBgn0030808.1.mrna1,comp163750_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117168669	117180039	.	+	.	ID=FBgn0030808.1.mrna1;geneID=FBgn0030808.1.path1;Name=FBgn0030808.1;Dir=sensecoverage=99.9;identity=99.2;matches=4792;mismatches=33;indels=6;unknowns=0;locus=RLOC_00010465
Chr1	stalkie_big_nohaplotig	exon	117168669	117169379	99	+	.	Parent=FBgn0030808.1.mrna1;Target=FBgn0030808.1 6 716 +
Chr1	stalkie_big_nohaplotig	exon	117173329	117175686	98	+	.	Parent=FBgn0030808.1.mrna1;Target=FBgn0030808.1 717 3080 +
Chr1	stalkie_big_nohaplotig	exon	117176575	117176671	100	+	.	Parent=FBgn0030808.1.mrna1;Target=FBgn0030808.1 3081 3177 +
Chr1	stalkie_big_nohaplotig	exon	117176730	117176856	100	+	.	Parent=FBgn0030808.1.mrna1;Target=FBgn0030808.1 3178 3304 +
Chr1	stalkie_big_nohaplotig	exon	117176919	117177559	99	+	.	Parent=FBgn0030808.1.mrna1;Target=FBgn0030808.1 3305 3945 +
Chr1	stalkie_big_nohaplotig	exon	117177625	117177723	100	+	.	Parent=FBgn0030808.1.mrna1;Target=FBgn0030808.1 3946 4044 +
Chr1	stalkie_big_nohaplotig	exon	117178880	117179014	100	+	.	Parent=FBgn0030808.1.mrna1;Target=FBgn0030808.1 4045 4179 +
Chr1	stalkie_big_nohaplotig	exon	117179084	117179607	99	+	.	Parent=FBgn0030808.1.mrna1;Target=FBgn0030808.1 4180 4703 +
Chr1	stalkie_big_nohaplotig	exon	117179907	117180039	100	+	.	Parent=FBgn0030808.1.mrna1;Target=FBgn0030808.1 4704 4836 +
Chr1	stalkie_big_nohaplotig	CDS	117168670	117169379	.	+	0	Parent=FBgn0030808.1.mrna1;Target=FBgn0030808.1 7 716 +
Chr1	stalkie_big_nohaplotig	CDS	117173329	117175686	.	+	1	Parent=FBgn0030808.1.mrna1;Target=FBgn0030808.1 717 3080 +
Chr1	stalkie_big_nohaplotig	CDS	117176575	117176671	.	+	1	Parent=FBgn0030808.1.mrna1;Target=FBgn0030808.1 3081 3177 +
Chr1	stalkie_big_nohaplotig	CDS	117176730	117176856	.	+	0	Parent=FBgn0030808.1.mrna1;Target=FBgn0030808.1 3178 3304 +
Chr1	stalkie_big_nohaplotig	CDS	117176919	117177559	.	+	2	Parent=FBgn0030808.1.mrna1;Target=FBgn0030808.1 3305 3945 +
Chr1	stalkie_big_nohaplotig	CDS	117177625	117177723	.	+	0	Parent=FBgn0030808.1.mrna1;Target=FBgn0030808.1 3946 4044 +
Chr1	stalkie_big_nohaplotig	CDS	117178880	117179014	.	+	0	Parent=FBgn0030808.1.mrna1;Target=FBgn0030808.1 4045 4179 +
Chr1	stalkie_big_nohaplotig	CDS	117179084	117179607	.	+	0	Parent=FBgn0030808.1.mrna1;Target=FBgn0030808.1 4180 4703 +
Chr1	stalkie_big_nohaplotig	CDS	117179907	117180039	.	+	1	Parent=FBgn0030808.1.mrna1;Target=FBgn0030808.1 4704 4836 +
Chr1	stalkie_big_nohaplotig	mRNA	117168671	117180229	.	+	.	ID=comp163750_c0_seq1.mrna1;geneID=comp163750_c0_seq1.path1;Name=comp163750_c0_seq1;Dir=sensecoverage=97.3;identity=99.3;matches=5138;mismatches=31;indels=6;unknowns=0;locus=RLOC_00010465
Chr1	stalkie_big_nohaplotig	exon	117168671	117169535	99	+	.	Parent=comp163750_c0_seq1.mrna1;Target=comp163750_c0_seq1 145 1009 +
Chr1	stalkie_big_nohaplotig	exon	117173329	117175686	98	+	.	Parent=comp163750_c0_seq1.mrna1;Target=comp163750_c0_seq1 1010 3373 +
Chr1	stalkie_big_nohaplotig	exon	117176575	117176671	100	+	.	Parent=comp163750_c0_seq1.mrna1;Target=comp163750_c0_seq1 3374 3470 +
Chr1	stalkie_big_nohaplotig	exon	117176730	117176856	100	+	.	Parent=comp163750_c0_seq1.mrna1;Target=comp163750_c0_seq1 3471 3597 +
Chr1	stalkie_big_nohaplotig	exon	117176919	117177559	99	+	.	Parent=comp163750_c0_seq1.mrna1;Target=comp163750_c0_seq1 3598 4238 +
Chr1	stalkie_big_nohaplotig	exon	117177625	117177723	100	+	.	Parent=comp163750_c0_seq1.mrna1;Target=comp163750_c0_seq1 4239 4337 +
Chr1	stalkie_big_nohaplotig	exon	117178880	117179014	100	+	.	Parent=comp163750_c0_seq1.mrna1;Target=comp163750_c0_seq1 4338 4472 +
Chr1	stalkie_big_nohaplotig	exon	117179084	117179607	99	+	.	Parent=comp163750_c0_seq1.mrna1;Target=comp163750_c0_seq1 4473 4996 +
Chr1	stalkie_big_nohaplotig	exon	117179907	117180229	100	+	.	Parent=comp163750_c0_seq1.mrna1;Target=comp163750_c0_seq1 4997 5319 +
Chr1	stalkie_big_nohaplotig	CDS	117168673	117169535	.	+	0	Parent=comp163750_c0_seq1.mrna1;Target=comp163750_c0_seq1 147 1009 +
Chr1	stalkie_big_nohaplotig	CDS	117173329	117175686	.	+	1	Parent=comp163750_c0_seq1.mrna1;Target=comp163750_c0_seq1 1010 3373 +
Chr1	stalkie_big_nohaplotig	CDS	117176575	117176671	.	+	1	Parent=comp163750_c0_seq1.mrna1;Target=comp163750_c0_seq1 3374 3470 +
Chr1	stalkie_big_nohaplotig	CDS	117176730	117176856	.	+	0	Parent=comp163750_c0_seq1.mrna1;Target=comp163750_c0_seq1 3471 3597 +
Chr1	stalkie_big_nohaplotig	CDS	117176919	117177559	.	+	2	Parent=comp163750_c0_seq1.mrna1;Target=comp163750_c0_seq1 3598 4238 +
Chr1	stalkie_big_nohaplotig	CDS	117177625	117177723	.	+	0	Parent=comp163750_c0_seq1.mrna1;Target=comp163750_c0_seq1 4239 4337 +
Chr1	stalkie_big_nohaplotig	CDS	117178880	117179014	.	+	0	Parent=comp163750_c0_seq1.mrna1;Target=comp163750_c0_seq1 4338 4472 +
Chr1	stalkie_big_nohaplotig	CDS	117179084	117179607	.	+	0	Parent=comp163750_c0_seq1.mrna1;Target=comp163750_c0_seq1 4473 4996 +
Chr1	stalkie_big_nohaplotig	CDS	117179907	117180042	.	+	1	Parent=comp163750_c0_seq1.mrna1;Target=comp163750_c0_seq1 4997 5132 +
Chr1	gffcl	locus	117180549	117183799	.	-	.	ID=RLOC_00010466;geneIDs=FBgn0030360.1.path2;transcripts=FBgn0030360.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	117180549	117183799	.	-	.	ID=FBgn0030360.1.mrna2;geneID=FBgn0030360.1.path2;Name=FBgn0030360.1;Dir=sensecoverage=45.0;identity=97.7;matches=794;mismatches=7;indels=12;unknowns=0;locus=RLOC_00010466
Chr1	stalkie_big_nohaplotig	exon	117180549	117180714	99	-	.	Parent=FBgn0030360.1.mrna2;Target=FBgn0030360.1 1629 1794 +
Chr1	stalkie_big_nohaplotig	exon	117180787	117181133	95	-	.	Parent=FBgn0030360.1.mrna2;Target=FBgn0030360.1 1282 1628 +
Chr1	stalkie_big_nohaplotig	exon	117181204	117181370	98	-	.	Parent=FBgn0030360.1.mrna2;Target=FBgn0030360.1 1115 1281 +
Chr1	stalkie_big_nohaplotig	exon	117183673	117183799	99	-	.	Parent=FBgn0030360.1.mrna2;Target=FBgn0030360.1 988 1114 +
Chr1	stalkie_big_nohaplotig	CDS	117180549	117180714	.	-	1	Parent=FBgn0030360.1.mrna2;Target=FBgn0030360.1 1629 1794 +
Chr1	stalkie_big_nohaplotig	CDS	117180787	117181133	.	-	0	Parent=FBgn0030360.1.mrna2;Target=FBgn0030360.1 1282 1628 +
Chr1	stalkie_big_nohaplotig	CDS	117181204	117181370	.	-	2	Parent=FBgn0030360.1.mrna2;Target=FBgn0030360.1 1115 1281 +
Chr1	stalkie_big_nohaplotig	CDS	117183673	117183799	.	-	0	Parent=FBgn0030360.1.mrna2;Target=FBgn0030360.1 988 1114 +
Chr1	gffcl	locus	117194010	117197776	.	+	.	ID=RLOC_00010467;geneIDs=FBgn0040069.2.path2;transcripts=FBgn0040069.2.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	117194010	117197776	.	+	.	ID=FBgn0040069.2.mrna2;geneID=FBgn0040069.2.path2;Name=FBgn0040069.2;Dir=sensecoverage=100.0;identity=99.5;matches=1588;mismatches=8;indels=0;unknowns=0;locus=RLOC_00010467
Chr1	stalkie_big_nohaplotig	exon	117194010	117194066	98	+	.	Parent=FBgn0040069.2.mrna2;Target=FBgn0040069.2 1 57 +
Chr1	stalkie_big_nohaplotig	exon	117194137	117194788	99	+	.	Parent=FBgn0040069.2.mrna2;Target=FBgn0040069.2 58 709 +
Chr1	stalkie_big_nohaplotig	exon	117196783	117197491	99	+	.	Parent=FBgn0040069.2.mrna2;Target=FBgn0040069.2 710 1418 +
Chr1	stalkie_big_nohaplotig	exon	117197599	117197776	99	+	.	Parent=FBgn0040069.2.mrna2;Target=FBgn0040069.2 1419 1596 +
Chr1	stalkie_big_nohaplotig	CDS	117194010	117194066	.	+	0	Parent=FBgn0040069.2.mrna2;Target=FBgn0040069.2 1 57 +
Chr1	stalkie_big_nohaplotig	CDS	117194137	117194788	.	+	0	Parent=FBgn0040069.2.mrna2;Target=FBgn0040069.2 58 709 +
Chr1	stalkie_big_nohaplotig	CDS	117196783	117197491	.	+	2	Parent=FBgn0040069.2.mrna2;Target=FBgn0040069.2 710 1418 +
Chr1	stalkie_big_nohaplotig	CDS	117197599	117197776	.	+	1	Parent=FBgn0040069.2.mrna2;Target=FBgn0040069.2 1419 1596 +
Chr1	gffcl	locus	117233391	117237157	.	-	.	ID=RLOC_00010468;geneIDs=FBgn0040069.2.path1;transcripts=FBgn0040069.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117233391	117237157	.	-	.	ID=FBgn0040069.2.mrna1;geneID=FBgn0040069.2.path1;Name=FBgn0040069.2;Dir=sensecoverage=100.0;identity=99.6;matches=1589;mismatches=7;indels=0;unknowns=0;locus=RLOC_00010468
Chr1	stalkie_big_nohaplotig	exon	117233391	117233568	99	-	.	Parent=FBgn0040069.2.mrna1;Target=FBgn0040069.2 1419 1596 +
Chr1	stalkie_big_nohaplotig	exon	117233676	117234384	99	-	.	Parent=FBgn0040069.2.mrna1;Target=FBgn0040069.2 710 1418 +
Chr1	stalkie_big_nohaplotig	exon	117236379	117237030	99	-	.	Parent=FBgn0040069.2.mrna1;Target=FBgn0040069.2 58 709 +
Chr1	stalkie_big_nohaplotig	exon	117237101	117237157	98	-	.	Parent=FBgn0040069.2.mrna1;Target=FBgn0040069.2 1 57 +
Chr1	stalkie_big_nohaplotig	CDS	117233391	117233568	.	-	1	Parent=FBgn0040069.2.mrna1;Target=FBgn0040069.2 1419 1596 +
Chr1	stalkie_big_nohaplotig	CDS	117233676	117234384	.	-	2	Parent=FBgn0040069.2.mrna1;Target=FBgn0040069.2 710 1418 +
Chr1	stalkie_big_nohaplotig	CDS	117236379	117237030	.	-	0	Parent=FBgn0040069.2.mrna1;Target=FBgn0040069.2 58 709 +
Chr1	stalkie_big_nohaplotig	CDS	117237101	117237157	.	-	0	Parent=FBgn0040069.2.mrna1;Target=FBgn0040069.2 1 57 +
Chr1	gffcl	locus	117249677	117250543	.	-	.	ID=RLOC_00010469;geneIDs=FBgn0052751.path1;transcripts=FBgn0052751.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117249677	117250543	.	-	.	ID=FBgn0052751.mrna1;geneID=FBgn0052751.path1;Name=FBgn0052751;Dir=sensecoverage=100.0;identity=98.7;matches=607;mismatches=6;indels=2;unknowns=0;Target=FBgn0052751 3 47 +;locus=RLOC_00010469
Chr1	stalkie_big_nohaplotig	exon	117249677	117249911	98	-	.	Parent=FBgn0052751.mrna1;Target=FBgn0052751 380 615 +
Chr1	stalkie_big_nohaplotig	exon	117250166	117250543	98	-	.	Parent=FBgn0052751.mrna1;Target=FBgn0052751 1 379 +
Chr1	stalkie_big_nohaplotig	CDS	117250498	117250541	.	-	0	Parent=FBgn0052751.mrna1
Chr1	gffcl	locus	117259998	117263890	.	+	.	ID=RLOC_00010470;geneIDs=FBgn0040069.1.path1;transcripts=FBgn0040069.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117259998	117263890	.	+	.	ID=FBgn0040069.1.mrna1;geneID=FBgn0040069.1.path1;Name=FBgn0040069.1;Dir=sensecoverage=100.0;identity=99.3;matches=1180;mismatches=8;indels=0;unknowns=0;locus=RLOC_00010470
Chr1	stalkie_big_nohaplotig	exon	117259998	117260072	98	+	.	Parent=FBgn0040069.1.mrna1;Target=FBgn0040069.1 1 75 +
Chr1	stalkie_big_nohaplotig	exon	117262465	117263119	99	+	.	Parent=FBgn0040069.1.mrna1;Target=FBgn0040069.1 76 730 +
Chr1	stalkie_big_nohaplotig	exon	117263433	117263890	99	+	.	Parent=FBgn0040069.1.mrna1;Target=FBgn0040069.1 731 1188 +
Chr1	stalkie_big_nohaplotig	CDS	117259998	117260072	.	+	0	Parent=FBgn0040069.1.mrna1;Target=FBgn0040069.1 1 75 +
Chr1	stalkie_big_nohaplotig	CDS	117262465	117263119	.	+	0	Parent=FBgn0040069.1.mrna1;Target=FBgn0040069.1 76 730 +
Chr1	stalkie_big_nohaplotig	CDS	117263433	117263890	.	+	2	Parent=FBgn0040069.1.mrna1;Target=FBgn0040069.1 731 1188 +
Chr1	gffcl	locus	117266621	117273699	.	-	.	ID=RLOC_00010471;geneIDs=comp159791_c1_seq1.path1;transcripts=comp159791_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117266621	117273699	.	-	.	ID=comp159791_c1_seq1.mrna1;geneID=comp159791_c1_seq1.path1;Name=comp159791_c1_seq1;Dir=antisensecoverage=99.4;identity=98.5;matches=1548;mismatches=14;indels=9;unknowns=0;locus=RLOC_00010471
Chr1	stalkie_big_nohaplotig	exon	117266621	117267636	98	-	.	Parent=comp159791_c1_seq1.mrna1;Target=comp159791_c1_seq1 2 1026 -
Chr1	stalkie_big_nohaplotig	exon	117273100	117273397	96	-	.	Parent=comp159791_c1_seq1.mrna1;Target=comp159791_c1_seq1 1027 1324 -
Chr1	stalkie_big_nohaplotig	exon	117273452	117273699	99	-	.	Parent=comp159791_c1_seq1.mrna1;Target=comp159791_c1_seq1 1325 1572 -
Chr1	stalkie_big_nohaplotig	CDS	117273225	117273397	.	-	2	Parent=comp159791_c1_seq1.mrna1;Target=comp159791_c1_seq1 1152 1324 .
Chr1	stalkie_big_nohaplotig	CDS	117273452	117273536	.	-	0	Parent=comp159791_c1_seq1.mrna1;Target=comp159791_c1_seq1 1325 1409 .
Chr1	gffcl	locus	117274874	117276343	.	-	.	ID=RLOC_00010472;geneIDs=FBgn0030800.1.path1;transcripts=FBgn0030800.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117274874	117276343	.	-	.	ID=FBgn0030800.1.mrna1;geneID=FBgn0030800.1.path1;Name=FBgn0030800.1;Dir=sensecoverage=95.4;identity=98.8;matches=1031;mismatches=12;indels=0;unknowns=88;locus=RLOC_00010472
Chr1	stalkie_big_nohaplotig	exon	117274874	117275380	99	-	.	Parent=FBgn0030800.1.mrna1;Target=FBgn0030800.1 625 1131 +
Chr1	stalkie_big_nohaplotig	exon	117275453	117275589	98	-	.	Parent=FBgn0030800.1.mrna1;Target=FBgn0030800.1 488 624 +
Chr1	stalkie_big_nohaplotig	exon	117275653	117275773	98	-	.	Parent=FBgn0030800.1.mrna1;Target=FBgn0030800.1 367 487 +
Chr1	stalkie_big_nohaplotig	exon	117275839	117275964	98	-	.	Parent=FBgn0030800.1.mrna1;Target=FBgn0030800.1 241 366 +
Chr1	stalkie_big_nohaplotig	exon	117276035	117276160	96	-	.	Parent=FBgn0030800.1.mrna1;Target=FBgn0030800.1 115 240 +
Chr1	stalkie_big_nohaplotig	exon	117276230	117276343	100	-	.	Parent=FBgn0030800.1.mrna1;Target=FBgn0030800.1 1 114 +
Chr1	stalkie_big_nohaplotig	CDS	117274874	117275380	.	-	0	Parent=FBgn0030800.1.mrna1;Target=FBgn0030800.1 625 1131 +
Chr1	stalkie_big_nohaplotig	CDS	117275453	117275589	.	-	2	Parent=FBgn0030800.1.mrna1;Target=FBgn0030800.1 488 624 +
Chr1	stalkie_big_nohaplotig	CDS	117275653	117275773	.	-	0	Parent=FBgn0030800.1.mrna1;Target=FBgn0030800.1 367 487 +
Chr1	stalkie_big_nohaplotig	CDS	117275839	117275964	.	-	0	Parent=FBgn0030800.1.mrna1;Target=FBgn0030800.1 241 366 +
Chr1	stalkie_big_nohaplotig	CDS	117276035	117276160	.	-	0	Parent=FBgn0030800.1.mrna1;Target=FBgn0030800.1 115 240 +
Chr1	stalkie_big_nohaplotig	CDS	117276230	117276343	.	-	0	Parent=FBgn0030800.1.mrna1;Target=FBgn0030800.1 1 114 +
Chr1	gffcl	locus	117278217	117278887	.	+	.	ID=RLOC_00010473;geneIDs=FBgn0030802.1.path1;transcripts=FBgn0030802.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117278217	117278887	.	+	.	ID=FBgn0030802.1.mrna1;geneID=FBgn0030802.1.path1;Name=FBgn0030802.1;Dir=sensecoverage=100.0;identity=99.1;matches=556;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010473
Chr1	stalkie_big_nohaplotig	exon	117278217	117278333	97	+	.	Parent=FBgn0030802.1.mrna1;Target=FBgn0030802.1 1 117 +
Chr1	stalkie_big_nohaplotig	exon	117278389	117278650	99	+	.	Parent=FBgn0030802.1.mrna1;Target=FBgn0030802.1 118 379 +
Chr1	stalkie_big_nohaplotig	exon	117278706	117278887	99	+	.	Parent=FBgn0030802.1.mrna1;Target=FBgn0030802.1 380 561 +
Chr1	stalkie_big_nohaplotig	CDS	117278217	117278333	.	+	0	Parent=FBgn0030802.1.mrna1;Target=FBgn0030802.1 1 117 +
Chr1	stalkie_big_nohaplotig	CDS	117278389	117278650	.	+	0	Parent=FBgn0030802.1.mrna1;Target=FBgn0030802.1 118 379 +
Chr1	stalkie_big_nohaplotig	CDS	117278706	117278887	.	+	2	Parent=FBgn0030802.1.mrna1;Target=FBgn0030802.1 380 561 +
Chr1	gffcl	locus	117283592	117288067	.	.	.	ID=RLOC_00010474;geneIDs=FBgn0026079.1.path1,comp156153_c0_seq1.path1;transcripts=FBgn0026079.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117283592	117287377	.	+	.	ID=FBgn0026079.1.mrna1;geneID=FBgn0026079.1.path1;Name=FBgn0026079.1;Dir=sensecoverage=100.0;identity=99.2;matches=2182;mismatches=17;indels=0;unknowns=0;locus=RLOC_00010474
Chr1	stalkie_big_nohaplotig	exon	117283592	117283687	100	+	.	Parent=FBgn0026079.1.mrna1;Target=FBgn0026079.1 1 96 +
Chr1	stalkie_big_nohaplotig	exon	117283744	117284445	99	+	.	Parent=FBgn0026079.1.mrna1;Target=FBgn0026079.1 97 798 +
Chr1	stalkie_big_nohaplotig	exon	117284511	117284653	100	+	.	Parent=FBgn0026079.1.mrna1;Target=FBgn0026079.1 799 941 +
Chr1	stalkie_big_nohaplotig	exon	117284716	117285051	99	+	.	Parent=FBgn0026079.1.mrna1;Target=FBgn0026079.1 942 1277 +
Chr1	stalkie_big_nohaplotig	exon	117285105	117285739	99	+	.	Parent=FBgn0026079.1.mrna1;Target=FBgn0026079.1 1278 1912 +
Chr1	stalkie_big_nohaplotig	exon	117285802	117285951	98	+	.	Parent=FBgn0026079.1.mrna1;Target=FBgn0026079.1 1913 2062 +
Chr1	stalkie_big_nohaplotig	exon	117287241	117287377	99	+	.	Parent=FBgn0026079.1.mrna1;Target=FBgn0026079.1 2063 2199 +
Chr1	stalkie_big_nohaplotig	CDS	117283592	117283687	.	+	0	Parent=FBgn0026079.1.mrna1;Target=FBgn0026079.1 1 96 +
Chr1	stalkie_big_nohaplotig	CDS	117283744	117284445	.	+	0	Parent=FBgn0026079.1.mrna1;Target=FBgn0026079.1 97 798 +
Chr1	stalkie_big_nohaplotig	CDS	117284511	117284653	.	+	0	Parent=FBgn0026079.1.mrna1;Target=FBgn0026079.1 799 941 +
Chr1	stalkie_big_nohaplotig	CDS	117284716	117285051	.	+	1	Parent=FBgn0026079.1.mrna1;Target=FBgn0026079.1 942 1277 +
Chr1	stalkie_big_nohaplotig	CDS	117285105	117285739	.	+	1	Parent=FBgn0026079.1.mrna1;Target=FBgn0026079.1 1278 1912 +
Chr1	stalkie_big_nohaplotig	CDS	117285802	117285951	.	+	2	Parent=FBgn0026079.1.mrna1;Target=FBgn0026079.1 1913 2062 +
Chr1	stalkie_big_nohaplotig	CDS	117287241	117287377	.	+	2	Parent=FBgn0026079.1.mrna1;Target=FBgn0026079.1 2063 2199 +
Chr1	gffcl	locus	117288140	117288497	.	-	.	ID=RLOC_00010475;geneIDs=comp150006_c0_seq1.path1;transcripts=comp150006_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117288140	117288497	.	-	.	ID=comp150006_c0_seq1.mrna1;geneID=comp150006_c0_seq1.path1;Name=comp150006_c0_seq1;Dir=indeterminatecoverage=92.6;identity=93.0;matches=348;mismatches=10;indels=16;unknowns=0;Target=comp150006_c0_seq1 374 1 .;CDS_Target=comp150006_c0_seq1 283 83 .;locus=RLOC_00010475
Chr1	stalkie_big_nohaplotig	exon	117288140	117288497	93	-	.	Parent=comp150006_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	117288228	117288415	.	-	0	Parent=comp150006_c0_seq1.mrna1
Chr1	gffcl	locus	117318992	117319056	.	+	.	ID=RLOC_00010477;geneIDs=comp152074_c2_seq1.path2;transcripts=comp152074_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	117318992	117319056	.	+	.	ID=comp152074_c2_seq1.mrna2;geneID=comp152074_c2_seq1.path2;Name=comp152074_c2_seq1;Dir=indeterminatecoverage=2.3;identity=100.0;matches=65;mismatches=0;indels=0;unknowns=0;Target=comp152074_c2_seq1 2788 2724 .;locus=RLOC_00010477
Chr1	stalkie_big_nohaplotig	exon	117318992	117319056	100	+	.	Parent=comp152074_c2_seq1.mrna2
Chr1	gffcl	locus	117323316	117325943	.	-	.	ID=RLOC_00010479;geneIDs=comp163168_c0_seq1.path1;transcripts=comp163168_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117323316	117325943	.	-	.	ID=comp163168_c0_seq1.mrna1;geneID=comp163168_c0_seq1.path1;Name=comp163168_c0_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=2317;mismatches=11;indels=2;unknowns=0;Target=comp163168_c0_seq1 1091 2008 +;locus=RLOC_00010479
Chr1	stalkie_big_nohaplotig	exon	117323316	117325175	99	-	.	Parent=comp163168_c0_seq1.mrna1;Target=comp163168_c0_seq1 469 2330 +
Chr1	stalkie_big_nohaplotig	exon	117325234	117325301	100	-	.	Parent=comp163168_c0_seq1.mrna1;Target=comp163168_c0_seq1 401 468 +
Chr1	stalkie_big_nohaplotig	exon	117325421	117325588	99	-	.	Parent=comp163168_c0_seq1.mrna1;Target=comp163168_c0_seq1 233 400 +
Chr1	stalkie_big_nohaplotig	exon	117325712	117325943	97	-	.	Parent=comp163168_c0_seq1.mrna1;Target=comp163168_c0_seq1 1 232 +
Chr1	stalkie_big_nohaplotig	CDS	117323638	117324554	.	-	0	Parent=comp163168_c0_seq1.mrna1
Chr1	gffcl	locus	117330953	117332292	.	-	.	ID=RLOC_00010480;geneIDs=comp163420_c0_seq1.path1;transcripts=comp163420_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117330953	117332292	.	-	.	ID=comp163420_c0_seq1.mrna1;geneID=comp163420_c0_seq1.path1;Name=comp163420_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.8;matches=1281;mismatches=27;indels=43;unknowns=0;Target=comp163420_c0_seq1 1319 1 .;CDS_Target=comp163420_c0_seq1 976 812 .;locus=RLOC_00010480
Chr1	stalkie_big_nohaplotig	exon	117330953	117332292	94	-	.	Parent=comp163420_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	117331294	117331458	.	-	0	Parent=comp163420_c0_seq1.mrna1
Chr1	gffcl	locus	117332787	117335873	.	-	.	ID=RLOC_00010481;geneIDs=FBgn0029848.1.path1;transcripts=FBgn0029848.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117332787	117335873	.	-	.	ID=FBgn0029848.1.mrna1;geneID=FBgn0029848.1.path1;Name=FBgn0029848.1;Dir=sensecoverage=100.0;identity=97.2;matches=1644;mismatches=17;indels=31;unknowns=0;locus=RLOC_00010481
Chr1	stalkie_big_nohaplotig	exon	117332787	117332970	100	-	.	Parent=FBgn0029848.1.mrna1;Target=FBgn0029848.1 1509 1692 +
Chr1	stalkie_big_nohaplotig	exon	117334221	117335025	99	-	.	Parent=FBgn0029848.1.mrna1;Target=FBgn0029848.1 704 1508 +
Chr1	stalkie_big_nohaplotig	exon	117335141	117335734	93	-	.	Parent=FBgn0029848.1.mrna1;Target=FBgn0029848.1 79 703 +
Chr1	stalkie_big_nohaplotig	exon	117335796	117335873	98	-	.	Parent=FBgn0029848.1.mrna1;Target=FBgn0029848.1 1 78 +
Chr1	stalkie_big_nohaplotig	CDS	117332787	117332970	.	-	1	Parent=FBgn0029848.1.mrna1;Target=FBgn0029848.1 1509 1692 +
Chr1	stalkie_big_nohaplotig	CDS	117334221	117335025	.	-	2	Parent=FBgn0029848.1.mrna1;Target=FBgn0029848.1 704 1508 +
Chr1	stalkie_big_nohaplotig	CDS	117335141	117335147	.	-	0	Parent=FBgn0029848.1.mrna1;Target=FBgn0029848.1 697 703 +
Chr1	gffcl	locus	117346926	117349930	.	+	.	ID=RLOC_00010482;geneIDs=FBgn0029848.2.path1;transcripts=FBgn0029848.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117346926	117349930	.	+	.	ID=FBgn0029848.2.mrna1;geneID=FBgn0029848.2.path1;Name=FBgn0029848.2;Dir=sensecoverage=100.0;identity=99.0;matches=1628;mismatches=16;indels=0;unknowns=0;locus=RLOC_00010482
Chr1	stalkie_big_nohaplotig	exon	117346926	117346994	98	+	.	Parent=FBgn0029848.2.mrna1;Target=FBgn0029848.2 1 69 +
Chr1	stalkie_big_nohaplotig	exon	117347063	117347699	98	+	.	Parent=FBgn0029848.2.mrna1;Target=FBgn0029848.2 70 706 +
Chr1	stalkie_big_nohaplotig	exon	117348939	117349638	99	+	.	Parent=FBgn0029848.2.mrna1;Target=FBgn0029848.2 707 1406 +
Chr1	stalkie_big_nohaplotig	exon	117349693	117349930	100	+	.	Parent=FBgn0029848.2.mrna1;Target=FBgn0029848.2 1407 1644 +
Chr1	stalkie_big_nohaplotig	CDS	117346926	117346994	.	+	0	Parent=FBgn0029848.2.mrna1;Target=FBgn0029848.2 1 69 +
Chr1	stalkie_big_nohaplotig	CDS	117347063	117347699	.	+	0	Parent=FBgn0029848.2.mrna1;Target=FBgn0029848.2 70 706 +
Chr1	stalkie_big_nohaplotig	CDS	117348939	117349638	.	+	2	Parent=FBgn0029848.2.mrna1;Target=FBgn0029848.2 707 1406 +
Chr1	stalkie_big_nohaplotig	CDS	117349693	117349930	.	+	1	Parent=FBgn0029848.2.mrna1;Target=FBgn0029848.2 1407 1644 +
Chr1	gffcl	locus	117353184	117353474	.	+	.	ID=RLOC_00010483;geneIDs=comp114087_c0_seq1.path1;transcripts=comp114087_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117353184	117353474	.	+	.	ID=comp114087_c0_seq1.mrna1;geneID=comp114087_c0_seq1.path1;Name=comp114087_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=284;mismatches=6;indels=1;unknowns=0;Target=comp114087_c0_seq1 290 1 .;CDS_Target=comp114087_c0_seq1 103 2 .;locus=RLOC_00010483
Chr1	stalkie_big_nohaplotig	exon	117353184	117353474	97	+	.	Parent=comp114087_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	117353185	117353287	.	+	0	Parent=comp114087_c0_seq1.mrna1
Chr1	gffcl	locus	117353512	117354827	.	+	.	ID=RLOC_00010484;geneIDs=comp159289_c0_seq1.path1;transcripts=comp159289_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117353512	117354827	.	+	.	ID=comp159289_c0_seq1.mrna1;geneID=comp159289_c0_seq1.path1;Name=comp159289_c0_seq1;Dir=antisensecoverage=96.6;identity=96.4;matches=1145;mismatches=27;indels=16;unknowns=0;Target=comp159289_c0_seq1 631 660 .;locus=RLOC_00010484
Chr1	stalkie_big_nohaplotig	exon	117353512	117353852	94	+	.	Parent=comp159289_c0_seq1.mrna1;Target=comp159289_c0_seq1 882 1227 -
Chr1	stalkie_big_nohaplotig	exon	117353948	117354005	90	+	.	Parent=comp159289_c0_seq1.mrna1;Target=comp159289_c0_seq1 820 881 -
Chr1	stalkie_big_nohaplotig	exon	117354052	117354827	97	+	.	Parent=comp159289_c0_seq1.mrna1;Target=comp159289_c0_seq1 43 819 -
Chr1	stalkie_big_nohaplotig	CDS	117354211	117354240	.	+	0	Parent=comp159289_c0_seq1.mrna1
Chr1	gffcl	locus	117438209	117438588	.	+	.	ID=RLOC_00010485;geneIDs=comp152103_c0_seq1.path1;transcripts=comp152103_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117438209	117438588	.	+	.	ID=comp152103_c0_seq1.mrna1;geneID=comp152103_c0_seq1.path1;Name=comp152103_c0_seq1;Dir=sensecoverage=99.7;identity=98.5;matches=323;mismatches=3;indels=2;unknowns=0;locus=RLOC_00010485
Chr1	stalkie_big_nohaplotig	exon	117438209	117438303	100	+	.	Parent=comp152103_c0_seq1.mrna1;Target=comp152103_c0_seq1 1 95 +
Chr1	stalkie_big_nohaplotig	exon	117438358	117438588	97	+	.	Parent=comp152103_c0_seq1.mrna1;Target=comp152103_c0_seq1 96 328 +
Chr1	stalkie_big_nohaplotig	CDS	117438210	117438303	.	+	0	Parent=comp152103_c0_seq1.mrna1;Target=comp152103_c0_seq1 2 95 +
Chr1	stalkie_big_nohaplotig	CDS	117438358	117438533	.	+	2	Parent=comp152103_c0_seq1.mrna1;Target=comp152103_c0_seq1 96 271 +
Chr1	gffcl	locus	117469925	118087551	.	+	.	ID=RLOC_00010486;geneIDs=FBgn0264386.path1,FBgn0029706.1.path1,comp147207_c0_seq1.path1,comp147207_c0_seq1.path2,comp147233_c0_seq1.path1;transcripts=FBgn0264386.mrna1,comp147207_c0_seq1.mrna1,FBgn0264386.mrna1,comp147233_c0_seq1.mrna1,FBgn0029706.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117469925	117616003	.	+	.	ID=FBgn0264386.mrna1;geneID=FBgn0264386.path1;Name=FBgn0264386;Dir=sensecoverage=100.0;identity=99.6;matches=2070;mismatches=8;indels=1;unknowns=0;locus=RLOC_00010486
Chr1	stalkie_big_nohaplotig	exon	117469925	117470597	99	+	.	Parent=FBgn0264386.mrna1;Target=FBgn0264386 1 674 +
Chr1	stalkie_big_nohaplotig	exon	117497885	117497996	99	+	.	Parent=FBgn0264386.mrna1;Target=FBgn0264386 675 786 +
Chr1	stalkie_big_nohaplotig	exon	117529919	117530150	99	+	.	Parent=FBgn0264386.mrna1;Target=FBgn0264386 787 1018 +
Chr1	stalkie_big_nohaplotig	exon	117530251	117530425	98	+	.	Parent=FBgn0264386.mrna1;Target=FBgn0264386 1019 1193 +
Chr1	stalkie_big_nohaplotig	exon	117538826	117538867	100	+	.	Parent=FBgn0264386.mrna1;Target=FBgn0264386 1194 1235 +
Chr1	stalkie_big_nohaplotig	exon	117547559	117547680	100	+	.	Parent=FBgn0264386.mrna1;Target=FBgn0264386 1236 1357 +
Chr1	stalkie_big_nohaplotig	exon	117551208	117551362	99	+	.	Parent=FBgn0264386.mrna1;Target=FBgn0264386 1358 1512 +
Chr1	stalkie_big_nohaplotig	exon	117557047	117557139	100	+	.	Parent=FBgn0264386.mrna1;Target=FBgn0264386 1513 1605 +
Chr1	stalkie_big_nohaplotig	exon	117577938	117578179	100	+	.	Parent=FBgn0264386.mrna1;Target=FBgn0264386 1606 1847 +
Chr1	stalkie_big_nohaplotig	exon	117579756	117579987	100	+	.	Parent=FBgn0264386.mrna1;Target=FBgn0264386 1848 2079 +
Chr1	stalkie_big_nohaplotig	exon	117607535	117607787	98	+	.	Parent=FBgn0264386.mrna1;Target=FBgn0264386 1 254 +
Chr1	stalkie_big_nohaplotig	exon	117610437	117610629	99	+	.	Parent=FBgn0264386.mrna1;Target=FBgn0264386 255 447 +
Chr1	stalkie_big_nohaplotig	exon	117612817	117612966	100	+	.	Parent=FBgn0264386.mrna1;Target=FBgn0264386 448 597 +
Chr1	stalkie_big_nohaplotig	exon	117613797	117616003	99	+	.	Parent=FBgn0264386.mrna1;Target=FBgn0264386 598 2805 +
Chr1	stalkie_big_nohaplotig	CDS	117469927	117470036	99	+	0	Parent=FBgn0264386.mrna1;Target=FBgn0264386 3 113 +
Chr1	stalkie_big_nohaplotig	CDS	117607537	117607742	98	+	0	Parent=FBgn0264386.mrna1;Target=FBgn0264386 3 209 +
Chr1	stalkie_big_nohaplotig	mRNA	117578630	118087551	.	+	.	ID=comp147207_c0_seq1.mrna1;geneID=comp147207_c0_seq1.path1;Name=comp147207_c0_seq1;Dir=antisensecoverage=68.4;identity=96.1;matches=609;mismatches=23;indels=2;unknowns=0;Target=comp147207_c0_seq1 308 370 .;locus=RLOC_00010486
Chr1	stalkie_big_nohaplotig	exon	117578630	117578631	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 632 633 -
Chr1	stalkie_big_nohaplotig	exon	117583661	117583665	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 627 631 -
Chr1	stalkie_big_nohaplotig	exon	117586922	117586933	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 615 626 -
Chr1	stalkie_big_nohaplotig	exon	117588388	117588389	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 613 614 -
Chr1	stalkie_big_nohaplotig	exon	117604596	117604597	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 611 612 -
Chr1	stalkie_big_nohaplotig	exon	117607938	117607941	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 607 610 -
Chr1	stalkie_big_nohaplotig	exon	117611049	117611051	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 604 606 -
Chr1	stalkie_big_nohaplotig	exon	117612082	117612087	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 598 603 -
Chr1	stalkie_big_nohaplotig	exon	117612680	117612683	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 594 597 -
Chr1	stalkie_big_nohaplotig	exon	117613679	117613680	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 592 593 -
Chr1	stalkie_big_nohaplotig	exon	117627915	117627919	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 587 591 -
Chr1	stalkie_big_nohaplotig	exon	117629455	117629464	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 577 586 -
Chr1	stalkie_big_nohaplotig	exon	117630092	117630096	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 572 576 -
Chr1	stalkie_big_nohaplotig	exon	117632204	117632205	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 570 571 -
Chr1	stalkie_big_nohaplotig	exon	117640115	117640118	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 566 569 -
Chr1	stalkie_big_nohaplotig	exon	117640611	117640617	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 559 565 -
Chr1	stalkie_big_nohaplotig	exon	117647906	117647911	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 553 558 -
Chr1	stalkie_big_nohaplotig	exon	117648141	117648146	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 547 552 -
Chr1	stalkie_big_nohaplotig	exon	117655466	117655469	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 543 546 -
Chr1	stalkie_big_nohaplotig	exon	117658292	117658293	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 541 542 -
Chr1	stalkie_big_nohaplotig	exon	117662696	117662703	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 533 540 -
Chr1	stalkie_big_nohaplotig	exon	117677238	117677239	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 531 532 -
Chr1	stalkie_big_nohaplotig	exon	117685054	117685091	63	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 493 530 -
Chr1	stalkie_big_nohaplotig	exon	117716886	117716893	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 485 492 -
Chr1	stalkie_big_nohaplotig	exon	117720463	117720465	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 482 484 -
Chr1	stalkie_big_nohaplotig	exon	117728650	117728654	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 477 481 -
Chr1	stalkie_big_nohaplotig	exon	117734222	117734226	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 472 476 -
Chr1	stalkie_big_nohaplotig	exon	117755998	117756002	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 467 471 -
Chr1	stalkie_big_nohaplotig	exon	117772190	117772194	100	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 462 466 -
Chr1	stalkie_big_nohaplotig	exon	118087091	118087551	97	+	.	Parent=comp147207_c0_seq1.mrna1;Target=comp147207_c0_seq1 1 461 -
Chr1	stalkie_big_nohaplotig	CDS	118087182	118087243	.	+	0	Parent=comp147207_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117607535	117616003	.	+	.	ID=FBgn0264386.mrna1;geneID=FBgn0264386.path1;Name=FBgn0264386;Dir=sensecoverage=100.0;identity=99.8;matches=2800;mismatches=3;indels=2;unknowns=0;locus=RLOC_00010486
Chr1	stalkie_big_nohaplotig	exon	117607535	117616003	.	+	.	Parent=FBgn0264386.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117623597	117653204	.	+	.	ID=comp147233_c0_seq1.mrna1;geneID=comp147233_c0_seq1.path1;Name=comp147233_c0_seq1;Dir=indeterminatecoverage=89.9;identity=94.4;matches=589;mismatches=23;indels=12;unknowns=0;Target=comp147233_c0_seq1 69 34 .;locus=RLOC_00010486
Chr1	stalkie_big_nohaplotig	exon	117623597	117623699	98	+	.	Parent=comp147233_c0_seq1.mrna1;Target=comp147233_c0_seq1 103 1 .
Chr1	stalkie_big_nohaplotig	exon	117623782	117624217	95	+	.	Parent=comp147233_c0_seq1.mrna1;Target=comp147233_c0_seq1 542 104 .
Chr1	stalkie_big_nohaplotig	exon	117630082	117630097	81	+	.	Parent=comp147233_c0_seq1.mrna1;Target=comp147233_c0_seq1 557 543 .
Chr1	stalkie_big_nohaplotig	exon	117637214	117637216	100	+	.	Parent=comp147233_c0_seq1.mrna1;Target=comp147233_c0_seq1 560 558 .
Chr1	stalkie_big_nohaplotig	exon	117642993	117643021	58	+	.	Parent=comp147233_c0_seq1.mrna1;Target=comp147233_c0_seq1 581 561 .
Chr1	stalkie_big_nohaplotig	exon	117643551	117643558	100	+	.	Parent=comp147233_c0_seq1.mrna1;Target=comp147233_c0_seq1 589 582 .
Chr1	stalkie_big_nohaplotig	exon	117645575	117645579	100	+	.	Parent=comp147233_c0_seq1.mrna1;Target=comp147233_c0_seq1 594 590 .
Chr1	stalkie_big_nohaplotig	exon	117650934	117650936	100	+	.	Parent=comp147233_c0_seq1.mrna1;Target=comp147233_c0_seq1 597 595 .
Chr1	stalkie_big_nohaplotig	exon	117651090	117651098	100	+	.	Parent=comp147233_c0_seq1.mrna1;Target=comp147233_c0_seq1 606 598 .
Chr1	stalkie_big_nohaplotig	exon	117653196	117653204	100	+	.	Parent=comp147233_c0_seq1.mrna1;Target=comp147233_c0_seq1 615 607 .
Chr1	stalkie_big_nohaplotig	CDS	117623630	117623665	.	+	0	Parent=comp147233_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117643020	117647590	.	+	.	ID=FBgn0029706.1.mrna1;geneID=FBgn0029706.1.path1;Name=FBgn0029706.1;Dir=sensecoverage=100.0;identity=99.5;matches=2764;mismatches=14;indels=0;unknowns=0;locus=RLOC_00010486
Chr1	stalkie_big_nohaplotig	exon	117643020	117643539	99	+	.	Parent=FBgn0029706.1.mrna1;Target=FBgn0029706.1 1 520 +
Chr1	stalkie_big_nohaplotig	exon	117643593	117644057	99	+	.	Parent=FBgn0029706.1.mrna1;Target=FBgn0029706.1 521 985 +
Chr1	stalkie_big_nohaplotig	exon	117644333	117644905	99	+	.	Parent=FBgn0029706.1.mrna1;Target=FBgn0029706.1 986 1558 +
Chr1	stalkie_big_nohaplotig	exon	117644961	117645258	100	+	.	Parent=FBgn0029706.1.mrna1;Target=FBgn0029706.1 1559 1856 +
Chr1	stalkie_big_nohaplotig	exon	117645330	117645543	98	+	.	Parent=FBgn0029706.1.mrna1;Target=FBgn0029706.1 1857 2070 +
Chr1	stalkie_big_nohaplotig	exon	117645608	117645761	98	+	.	Parent=FBgn0029706.1.mrna1;Target=FBgn0029706.1 2071 2224 +
Chr1	stalkie_big_nohaplotig	exon	117646615	117646730	100	+	.	Parent=FBgn0029706.1.mrna1;Target=FBgn0029706.1 2225 2340 +
Chr1	stalkie_big_nohaplotig	exon	117647153	117647590	99	+	.	Parent=FBgn0029706.1.mrna1;Target=FBgn0029706.1 2341 2778 +
Chr1	stalkie_big_nohaplotig	CDS	117643020	117643539	.	+	0	Parent=FBgn0029706.1.mrna1;Target=FBgn0029706.1 1 520 +
Chr1	stalkie_big_nohaplotig	CDS	117643593	117644057	.	+	2	Parent=FBgn0029706.1.mrna1;Target=FBgn0029706.1 521 985 +
Chr1	stalkie_big_nohaplotig	CDS	117644333	117644905	.	+	2	Parent=FBgn0029706.1.mrna1;Target=FBgn0029706.1 986 1558 +
Chr1	stalkie_big_nohaplotig	CDS	117644961	117645258	.	+	2	Parent=FBgn0029706.1.mrna1;Target=FBgn0029706.1 1559 1856 +
Chr1	stalkie_big_nohaplotig	CDS	117645330	117645543	.	+	1	Parent=FBgn0029706.1.mrna1;Target=FBgn0029706.1 1857 2070 +
Chr1	stalkie_big_nohaplotig	CDS	117645608	117645761	.	+	0	Parent=FBgn0029706.1.mrna1;Target=FBgn0029706.1 2071 2224 +
Chr1	stalkie_big_nohaplotig	CDS	117646615	117646730	.	+	2	Parent=FBgn0029706.1.mrna1;Target=FBgn0029706.1 2225 2340 +
Chr1	stalkie_big_nohaplotig	CDS	117647153	117647590	.	+	0	Parent=FBgn0029706.1.mrna1;Target=FBgn0029706.1 2341 2778 +
Chr1	gffcl	locus	117515038	117562989	.	+	.	ID=RLOC_00010487;geneIDs=comp151170_c1_seq1.path3;transcripts=comp151170_c1_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	117515038	117562989	.	+	.	ID=comp151170_c1_seq1.mrna3;geneID=comp151170_c1_seq1.path3;Name=comp151170_c1_seq1;Dir=indeterminatecoverage=78.7;identity=89.8;matches=1360;mismatches=103;indels=51;unknowns=0;Target=comp151170_c1_seq1 1781 1578 .;locus=RLOC_00010487
Chr1	stalkie_big_nohaplotig	exon	117515038	117515043	100	+	.	Parent=comp151170_c1_seq1.mrna3;Target=comp151170_c1_seq1 404 399 .
Chr1	stalkie_big_nohaplotig	exon	117519702	117519706	100	+	.	Parent=comp151170_c1_seq1.mrna3;Target=comp151170_c1_seq1 409 405 .
Chr1	stalkie_big_nohaplotig	exon	117534745	117534754	100	+	.	Parent=comp151170_c1_seq1.mrna3;Target=comp151170_c1_seq1 419 410 .
Chr1	stalkie_big_nohaplotig	exon	117547697	117547701	100	+	.	Parent=comp151170_c1_seq1.mrna3;Target=comp151170_c1_seq1 432 428 .
Chr1	stalkie_big_nohaplotig	exon	117554090	117554095	100	+	.	Parent=comp151170_c1_seq1.mrna3;Target=comp151170_c1_seq1 438 433 .
Chr1	stalkie_big_nohaplotig	exon	117561459	117562193	96	+	.	Parent=comp151170_c1_seq1.mrna3;Target=comp151170_c1_seq1 1174 439 .
Chr1	stalkie_big_nohaplotig	exon	117562245	117562989	82	+	.	Parent=comp151170_c1_seq1.mrna3;Target=comp151170_c1_seq1 1869 1175 .
Chr1	stalkie_big_nohaplotig	CDS	117562680	117562901	.	+	0	Parent=comp151170_c1_seq1.mrna3
Chr1	gffcl	locus	117573344	117576020	.	-	.	ID=RLOC_00010488;geneIDs=ORF375.path1;transcripts=ORF375.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117573344	117576020	.	-	.	ID=ORF375.mrna1;geneID=ORF375.path1;Name=ORF375;Dir=sensecoverage=100.0;identity=98.1;matches=1907;mismatches=34;indels=3;unknowns=0;locus=RLOC_00010488
Chr1	stalkie_big_nohaplotig	exon	117573344	117573942	97	-	.	Parent=ORF375.mrna1;Target=ORF375 1346 1944 +
Chr1	stalkie_big_nohaplotig	exon	117574019	117575035	97	-	.	Parent=ORF375.mrna1;Target=ORF375 326 1345 +
Chr1	stalkie_big_nohaplotig	exon	117575097	117575369	98	-	.	Parent=ORF375.mrna1;Target=ORF375 53 325 +
Chr1	stalkie_big_nohaplotig	exon	117575969	117576020	100	-	.	Parent=ORF375.mrna1;Target=ORF375 1 52 +
Chr1	stalkie_big_nohaplotig	CDS	117573344	117573942	.	-	2	Parent=ORF375.mrna1;Target=ORF375 1346 1944 +
Chr1	stalkie_big_nohaplotig	CDS	117574019	117575035	.	-	2	Parent=ORF375.mrna1;Target=ORF375 326 1345 +
Chr1	stalkie_big_nohaplotig	CDS	117575097	117575369	.	-	2	Parent=ORF375.mrna1;Target=ORF375 53 325 +
Chr1	stalkie_big_nohaplotig	CDS	117575969	117576020	.	-	0	Parent=ORF375.mrna1;Target=ORF375 1 52 +
Chr1	gffcl	locus	117617945	117618372	.	+	.	ID=RLOC_00010489;geneIDs=comp156733_c0_seq1.path1;transcripts=comp156733_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117617945	117618372	.	+	.	ID=comp156733_c0_seq1.mrna1;geneID=comp156733_c0_seq1.path1;Name=comp156733_c0_seq1;Dir=indeterminatecoverage=99.8;identity=86.8;matches=382;mismatches=29;indels=29;unknowns=0;Target=comp156733_c0_seq1 424 2 .;CDS_Target=comp156733_c0_seq1 109 2 .;locus=RLOC_00010489
Chr1	stalkie_big_nohaplotig	exon	117617945	117618372	86	+	.	Parent=comp156733_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	117617945	117618044	.	+	0	Parent=comp156733_c0_seq1.mrna1
Chr1	gffcl	locus	117621674	117622317	.	+	.	ID=RLOC_00010490;geneIDs=comp149951_c0_seq1.path1;transcripts=comp149951_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117621674	117622317	.	+	.	ID=comp149951_c0_seq1.mrna1;geneID=comp149951_c0_seq1.path1;Name=comp149951_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=636;mismatches=5;indels=4;unknowns=0;Target=comp149951_c0_seq1 642 1 .;CDS_Target=comp149951_c0_seq1 51 1 .;locus=RLOC_00010490
Chr1	stalkie_big_nohaplotig	exon	117621674	117622317	98	+	.	Parent=comp149951_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	117621674	117621724	.	+	0	Parent=comp149951_c0_seq1.mrna1
Chr1	gffcl	locus	117623030	117623232	.	-	.	ID=RLOC_00010491;geneIDs=comp145173_c0_seq1.path1;transcripts=comp145173_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117623030	117623232	.	-	.	ID=comp145173_c0_seq1.mrna1;geneID=comp145173_c0_seq1.path1;Name=comp145173_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=200;mismatches=3;indels=0;unknowns=0;Target=comp145173_c0_seq1 203 1 .;CDS_Target=comp145173_c0_seq1 177 1 .;locus=RLOC_00010491
Chr1	stalkie_big_nohaplotig	exon	117623030	117623232	98	-	.	Parent=comp145173_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	117623056	117623232	.	-	0	Parent=comp145173_c0_seq1.mrna1
Chr1	gffcl	locus	117624834	117625218	.	+	.	ID=RLOC_00010492;geneIDs=comp87123_c0_seq1.path1;transcripts=comp87123_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117624834	117625218	.	+	.	ID=comp87123_c0_seq1.mrna1;geneID=comp87123_c0_seq1.path1;Name=comp87123_c0_seq1;Dir=indeterminatecoverage=99.7;identity=96.6;matches=374;mismatches=11;indels=2;unknowns=0;Target=comp87123_c0_seq1 388 2 .;CDS_Target=comp87123_c0_seq1 130 101 .;locus=RLOC_00010492
Chr1	stalkie_big_nohaplotig	exon	117624834	117625218	96	+	.	Parent=comp87123_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	117624933	117624962	.	+	0	Parent=comp87123_c0_seq1.mrna1
Chr1	gffcl	locus	117627159	117627320	.	-	.	ID=RLOC_00010493;geneIDs=comp137518_c0_seq1.path2;transcripts=comp137518_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	117627159	117627320	.	-	.	ID=comp137518_c0_seq1.mrna2;geneID=comp137518_c0_seq1.path2;Name=comp137518_c0_seq1;Dir=indeterminatecoverage=80.6;identity=94.4;matches=153;mismatches=9;indels=0;unknowns=0;Target=comp137518_c0_seq1 200 39 .;CDS_Target=comp137518_c0_seq1 85 39 .;locus=RLOC_00010493
Chr1	stalkie_big_nohaplotig	exon	117627159	117627320	94	-	.	Parent=comp137518_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	117627274	117627320	.	-	1	Parent=comp137518_c0_seq1.mrna2
Chr1	gffcl	locus	117627388	117642689	.	-	.	ID=RLOC_00010494;geneIDs=FBgn0036210.1.path1;transcripts=FBgn0036210.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117627388	117642689	.	-	.	ID=FBgn0036210.1.mrna1;geneID=FBgn0036210.1.path1;Name=FBgn0036210.1;Dir=sensecoverage=100.0;identity=97.6;matches=922;mismatches=20;indels=3;unknowns=0;locus=RLOC_00010494
Chr1	stalkie_big_nohaplotig	exon	117627388	117627502	97	-	.	Parent=FBgn0036210.1.mrna1;Target=FBgn0036210.1 831 945 +
Chr1	stalkie_big_nohaplotig	exon	117627557	117627801	97	-	.	Parent=FBgn0036210.1.mrna1;Target=FBgn0036210.1 583 830 +
Chr1	stalkie_big_nohaplotig	exon	117627967	117628134	97	-	.	Parent=FBgn0036210.1.mrna1;Target=FBgn0036210.1 415 582 +
Chr1	stalkie_big_nohaplotig	exon	117629642	117629814	100	-	.	Parent=FBgn0036210.1.mrna1;Target=FBgn0036210.1 242 414 +
Chr1	stalkie_big_nohaplotig	exon	117642449	117642689	95	-	.	Parent=FBgn0036210.1.mrna1;Target=FBgn0036210.1 1 241 +
Chr1	stalkie_big_nohaplotig	CDS	117627388	117627502	.	-	1	Parent=FBgn0036210.1.mrna1;Target=FBgn0036210.1 831 945 +
Chr1	stalkie_big_nohaplotig	CDS	117627557	117627801	.	-	0	Parent=FBgn0036210.1.mrna1;Target=FBgn0036210.1 583 830 +
Chr1	stalkie_big_nohaplotig	CDS	117627967	117628134	.	-	0	Parent=FBgn0036210.1.mrna1;Target=FBgn0036210.1 415 582 +
Chr1	stalkie_big_nohaplotig	CDS	117629642	117629814	.	-	2	Parent=FBgn0036210.1.mrna1;Target=FBgn0036210.1 242 414 +
Chr1	stalkie_big_nohaplotig	CDS	117642449	117642689	.	-	0	Parent=FBgn0036210.1.mrna1;Target=FBgn0036210.1 1 241 +
Chr1	gffcl	locus	117648327	117652761	.	-	.	ID=RLOC_00010495;geneIDs=comp151605_c0_seq1.path1;transcripts=comp151605_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117648327	117652761	.	-	.	ID=comp151605_c0_seq1.mrna1;geneID=comp151605_c0_seq1.path1;Name=comp151605_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=718;mismatches=3;indels=0;unknowns=0;Target=comp151605_c0_seq1 603 719 .;locus=RLOC_00010495
Chr1	stalkie_big_nohaplotig	exon	117648327	117648896	99	-	.	Parent=comp151605_c0_seq1.mrna1;Target=comp151605_c0_seq1 1 570 -
Chr1	stalkie_big_nohaplotig	exon	117652611	117652761	98	-	.	Parent=comp151605_c0_seq1.mrna1;Target=comp151605_c0_seq1 571 721 -
Chr1	stalkie_big_nohaplotig	CDS	117652643	117652759	.	-	0	Parent=comp151605_c0_seq1.mrna1
Chr1	gffcl	locus	117743363	117744573	.	+	.	ID=RLOC_00010496;geneIDs=comp155660_c0_seq1.path1;transcripts=comp155660_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117743363	117744573	.	+	.	ID=comp155660_c0_seq1.mrna1;geneID=comp155660_c0_seq1.path1;Name=comp155660_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.1;matches=1200;mismatches=11;indels=0;unknowns=0;Target=comp155660_c0_seq1 1211 1 .;CDS_Target=comp155660_c0_seq1 755 507 .;locus=RLOC_00010496
Chr1	stalkie_big_nohaplotig	exon	117743363	117744573	99	+	.	Parent=comp155660_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	117743869	117744117	.	+	0	Parent=comp155660_c0_seq1.mrna1
Chr1	gffcl	locus	117745309	117746103	.	-	.	ID=RLOC_00010497;geneIDs=comp158377_c0_seq1.path1;transcripts=comp158377_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117745309	117746103	.	-	.	ID=comp158377_c0_seq1.mrna1;geneID=comp158377_c0_seq1.path1;Name=comp158377_c0_seq1;Dir=indeterminatecoverage=95.3;identity=98.2;matches=781;mismatches=14;indels=0;unknowns=0;Target=comp158377_c0_seq1 795 1 .;CDS_Target=comp158377_c0_seq1 271 221 .;locus=RLOC_00010497
Chr1	stalkie_big_nohaplotig	exon	117745309	117746103	98	-	.	Parent=comp158377_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	117745833	117745883	.	-	0	Parent=comp158377_c0_seq1.mrna1
Chr1	gffcl	locus	117746612	117746829	.	-	.	ID=RLOC_00010498;geneIDs=comp158602_c0_seq1.path1;transcripts=comp158602_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117746612	117746829	.	-	.	ID=comp158602_c0_seq1.mrna1;geneID=comp158602_c0_seq1.path1;Name=comp158602_c0_seq1;Dir=indeterminatecoverage=45.3;identity=99.1;matches=216;mismatches=2;indels=0;unknowns=0;Target=comp158602_c0_seq1 220 3 .;CDS_Target=comp158602_c0_seq1 218 138 .;locus=RLOC_00010498
Chr1	stalkie_big_nohaplotig	exon	117746612	117746829	99	-	.	Parent=comp158602_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	117746614	117746694	.	-	0	Parent=comp158602_c0_seq1.mrna1
Chr1	gffcl	locus	117747211	117748679	.	.	.	ID=RLOC_00010499;geneIDs=comp129026_c0_seq1.path1,comp135800_c0_seq1.path1,comp147263_c0_seq1.path1,comp147723_c0_seq1.path1;transcripts=comp135800_c0_seq1.mrna1,comp147723_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117747653	117748111	.	-	.	ID=comp135800_c0_seq1.mrna1;geneID=comp135800_c0_seq1.path1;Name=comp135800_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=457;mismatches=2;indels=0;unknowns=0;Target=comp135800_c0_seq1 459 1 .;CDS_Target=comp135800_c0_seq1 312 172 .;locus=RLOC_00010499
Chr1	stalkie_big_nohaplotig	exon	117747653	117748111	99	-	.	Parent=comp135800_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	117747800	117747940	.	-	0	Parent=comp135800_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117748322	117748679	.	+	.	ID=comp147723_c0_seq1.mrna1;geneID=comp147723_c0_seq1.path1;Name=comp147723_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=357;mismatches=1;indels=0;unknowns=0;Target=comp147723_c0_seq1 358 1 .;CDS_Target=comp147723_c0_seq1 88 2 .;locus=RLOC_00010499
Chr1	stalkie_big_nohaplotig	exon	117748322	117748679	99	+	.	Parent=comp147723_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	117748323	117748409	.	+	0	Parent=comp147723_c0_seq1.mrna1
Chr1	gffcl	locus	117855330	117856197	.	+	.	ID=RLOC_00010501;geneIDs=comp155779_c0_seq1.path1;transcripts=comp155779_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117855330	117856197	.	+	.	ID=comp155779_c0_seq1.mrna1;geneID=comp155779_c0_seq1.path1;Name=comp155779_c0_seq1;Dir=indeterminatecoverage=97.2;identity=92.8;matches=779;mismatches=31;indels=29;unknowns=0;Target=comp155779_c0_seq1 103 26 .;locus=RLOC_00010501
Chr1	stalkie_big_nohaplotig	exon	117855330	117855929	90	+	.	Parent=comp155779_c0_seq1.mrna1;Target=comp155779_c0_seq1 639 25 .
Chr1	stalkie_big_nohaplotig	exon	117855981	117856197	99	+	.	Parent=comp155779_c0_seq1.mrna1;Target=comp155779_c0_seq1 860 644 .
Chr1	stalkie_big_nohaplotig	CDS	117855331	117855408	.	+	0	Parent=comp155779_c0_seq1.mrna1
Chr1	gffcl	locus	117856835	117857799	.	-	.	ID=RLOC_00010502;geneIDs=comp136212_c0_seq1.path1;transcripts=comp136212_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	117856835	117857799	.	-	.	ID=comp136212_c0_seq1.mrna1;geneID=comp136212_c0_seq1.path1;Name=comp136212_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=958;mismatches=7;indels=0;unknowns=0;Target=comp136212_c0_seq1 965 1 .;CDS_Target=comp136212_c0_seq1 401 306 .;locus=RLOC_00010502
Chr1	stalkie_big_nohaplotig	exon	117856835	117857799	99	-	.	Parent=comp136212_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	117857399	117857494	.	-	0	Parent=comp136212_c0_seq1.mrna1
Chr1	gffcl	locus	117869628	117874062	.	+	.	ID=RLOC_00010503;geneIDs=comp151605_c0_seq1.path2;transcripts=comp151605_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	117869628	117874062	.	+	.	ID=comp151605_c0_seq1.mrna2;geneID=comp151605_c0_seq1.path2;Name=comp151605_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=718;mismatches=3;indels=0;unknowns=0;Target=comp151605_c0_seq1 603 719 .;locus=RLOC_00010503
Chr1	stalkie_big_nohaplotig	exon	117869628	117869778	98	+	.	Parent=comp151605_c0_seq1.mrna2;Target=comp151605_c0_seq1 571 721 -
Chr1	stalkie_big_nohaplotig	exon	117873493	117874062	99	+	.	Parent=comp151605_c0_seq1.mrna2;Target=comp151605_c0_seq1 1 570 -
Chr1	stalkie_big_nohaplotig	CDS	117869630	117869746	.	+	0	Parent=comp151605_c0_seq1.mrna2
Chr1	gffcl	locus	117996250	117996290	.	-	.	ID=RLOC_00010504;geneIDs=comp163706_c0_seq1.path2;transcripts=comp163706_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	117996250	117996290	.	-	.	ID=comp163706_c0_seq1.mrna2;geneID=comp163706_c0_seq1.path2;Name=comp163706_c0_seq1;Dir=indeterminatecoverage=0.6;identity=100.0;matches=41;mismatches=0;indels=0;unknowns=0;Target=comp163706_c0_seq1 6574 6534 .;locus=RLOC_00010504
Chr1	stalkie_big_nohaplotig	exon	117996250	117996290	100	-	.	Parent=comp163706_c0_seq1.mrna2
Chr1	gffcl	locus	118082198	118082543	.	-	.	ID=RLOC_00010506;geneIDs=comp150150_c0_seq1.path1;transcripts=comp150150_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118082198	118082543	.	-	.	ID=comp150150_c0_seq1.mrna1;geneID=comp150150_c0_seq1.path1;Name=comp150150_c0_seq1;Dir=indeterminatecoverage=93.7;identity=94.5;matches=327;mismatches=17;indels=2;unknowns=0;Target=comp150150_c0_seq1 367 24 .;CDS_Target=comp150150_c0_seq1 116 24 .;locus=RLOC_00010506
Chr1	stalkie_big_nohaplotig	exon	118082198	118082543	94	-	.	Parent=comp150150_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	118082449	118082543	.	-	0	Parent=comp150150_c0_seq1.mrna1
Chr1	gffcl	locus	118084847	118084918	.	-	.	ID=RLOC_00010507;geneIDs=comp615580_c0_seq1.path1;transcripts=comp615580_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118084847	118084918	.	-	.	ID=comp615580_c0_seq1.mrna1;geneID=comp615580_c0_seq1.path1;Name=comp615580_c0_seq1;Dir=indeterminatecoverage=35.5;identity=93.1;matches=67;mismatches=5;indels=0;unknowns=0;Target=comp615580_c0_seq1 105 34 .;CDS_Target=comp615580_c0_seq1 75 34 .;locus=RLOC_00010507
Chr1	stalkie_big_nohaplotig	exon	118084847	118084918	93	-	.	Parent=comp615580_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	118084877	118084918	.	-	0	Parent=comp615580_c0_seq1.mrna1
Chr1	gffcl	locus	118085178	118085509	.	+	.	ID=RLOC_00010508;geneIDs=comp155078_c0_seq1.path1;transcripts=comp155078_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118085178	118085509	.	+	.	ID=comp155078_c0_seq1.mrna1;geneID=comp155078_c0_seq1.path1;Name=comp155078_c0_seq1;Dir=indeterminatecoverage=87.9;identity=84.8;matches=308;mismatches=16;indels=39;unknowns=0;Target=comp155078_c0_seq1 355 1 .;CDS_Target=comp155078_c0_seq1 59 3 .;locus=RLOC_00010508
Chr1	stalkie_big_nohaplotig	exon	118085178	118085509	84	+	.	Parent=comp155078_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	118085180	118085236	.	+	0	Parent=comp155078_c0_seq1.mrna1
Chr1	gffcl	locus	118085604	118085967	.	+	.	ID=RLOC_00010509;geneIDs=comp156128_c0_seq1.path1;transcripts=comp156128_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118085604	118085967	.	+	.	ID=comp156128_c0_seq1.mrna1;geneID=comp156128_c0_seq1.path1;Name=comp156128_c0_seq1;Dir=indeterminatecoverage=98.2;identity=93.0;matches=358;mismatches=6;indels=21;unknowns=0;Target=comp156128_c0_seq1 385 1 .;CDS_Target=comp156128_c0_seq1 305 183 .;locus=RLOC_00010509
Chr1	stalkie_big_nohaplotig	exon	118085604	118085967	92	+	.	Parent=comp156128_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	118085786	118085890	.	+	0	Parent=comp156128_c0_seq1.mrna1
Chr1	gffcl	locus	118090741	118093636	.	-	.	ID=RLOC_00010510;geneIDs=FBgn0034258.1.path1;transcripts=FBgn0034258.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118090741	118093636	.	-	.	ID=FBgn0034258.1.mrna1;geneID=FBgn0034258.1.path1;Name=FBgn0034258.1;Dir=sensecoverage=100.0;identity=99.6;matches=2764;mismatches=11;indels=0;unknowns=0;locus=RLOC_00010510
Chr1	stalkie_big_nohaplotig	exon	118090741	118091452	99	-	.	Parent=FBgn0034258.1.mrna1;Target=FBgn0034258.1 2064 2775 +
Chr1	stalkie_big_nohaplotig	exon	118091518	118093469	99	-	.	Parent=FBgn0034258.1.mrna1;Target=FBgn0034258.1 112 2063 +
Chr1	stalkie_big_nohaplotig	exon	118093526	118093636	99	-	.	Parent=FBgn0034258.1.mrna1;Target=FBgn0034258.1 1 111 +
Chr1	stalkie_big_nohaplotig	CDS	118090741	118091452	.	-	1	Parent=FBgn0034258.1.mrna1;Target=FBgn0034258.1 2064 2775 +
Chr1	stalkie_big_nohaplotig	CDS	118091518	118093469	.	-	0	Parent=FBgn0034258.1.mrna1;Target=FBgn0034258.1 112 2063 +
Chr1	stalkie_big_nohaplotig	CDS	118093526	118093636	.	-	0	Parent=FBgn0034258.1.mrna1;Target=FBgn0034258.1 1 111 +
Chr1	gffcl	locus	118095400	118097914	.	+	.	ID=RLOC_00010511;geneIDs=FBgn0030082.1.path1;transcripts=FBgn0030082.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118095400	118097914	.	+	.	ID=FBgn0030082.1.mrna1;geneID=FBgn0030082.1.path1;Name=FBgn0030082.1;Dir=sensecoverage=100.0;identity=99.5;matches=555;mismatches=1;indels=2;unknowns=0;locus=RLOC_00010511
Chr1	stalkie_big_nohaplotig	exon	118095400	118095421	91	+	.	Parent=FBgn0030082.1.mrna1;Target=FBgn0030082.1 1 24 +
Chr1	stalkie_big_nohaplotig	exon	118095622	118095711	100	+	.	Parent=FBgn0030082.1.mrna1;Target=FBgn0030082.1 25 114 +
Chr1	stalkie_big_nohaplotig	exon	118095783	118095903	100	+	.	Parent=FBgn0030082.1.mrna1;Target=FBgn0030082.1 115 235 +
Chr1	stalkie_big_nohaplotig	exon	118097592	118097914	99	+	.	Parent=FBgn0030082.1.mrna1;Target=FBgn0030082.1 236 558 +
Chr1	stalkie_big_nohaplotig	CDS	118095637	118095711	.	+	0	Parent=FBgn0030082.1.mrna1;Target=FBgn0030082.1 40 114 +
Chr1	stalkie_big_nohaplotig	CDS	118095783	118095903	.	+	0	Parent=FBgn0030082.1.mrna1;Target=FBgn0030082.1 115 235 +
Chr1	stalkie_big_nohaplotig	CDS	118097592	118097914	.	+	2	Parent=FBgn0030082.1.mrna1;Target=FBgn0030082.1 236 558 +
Chr1	gffcl	locus	118102732	118104390	.	-	.	ID=RLOC_00010513;geneIDs=comp157372_c0_seq1.path1;transcripts=comp157372_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118102732	118104390	.	-	.	ID=comp157372_c0_seq1.mrna1;geneID=comp157372_c0_seq1.path1;Name=comp157372_c0_seq1;Dir=sensecoverage=99.8;identity=95.2;matches=1073;mismatches=21;indels=33;unknowns=0;locus=RLOC_00010513
Chr1	stalkie_big_nohaplotig	exon	118102732	118103393	93	-	.	Parent=comp157372_c0_seq1.mrna1;Target=comp157372_c0_seq1 467 1097 +
Chr1	stalkie_big_nohaplotig	exon	118103869	118104043	97	-	.	Parent=comp157372_c0_seq1.mrna1;Target=comp157372_c0_seq1 292 466 +
Chr1	stalkie_big_nohaplotig	exon	118104102	118104390	98	-	.	Parent=comp157372_c0_seq1.mrna1;Target=comp157372_c0_seq1 3 291 +
Chr1	stalkie_big_nohaplotig	CDS	118102993	118103393	.	-	2	Parent=comp157372_c0_seq1.mrna1;Target=comp157372_c0_seq1 467 867 +
Chr1	stalkie_big_nohaplotig	CDS	118103869	118104043	.	-	0	Parent=comp157372_c0_seq1.mrna1;Target=comp157372_c0_seq1 292 466 +
Chr1	stalkie_big_nohaplotig	CDS	118104102	118104221	.	-	0	Parent=comp157372_c0_seq1.mrna1;Target=comp157372_c0_seq1 172 291 +
Chr1	gffcl	locus	118106287	118107043	.	-	.	ID=RLOC_00010514;geneIDs=FBgn0029709.1.path1;transcripts=FBgn0029709.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118106287	118107043	.	-	.	ID=FBgn0029709.1.mrna1;geneID=FBgn0029709.1.path1;Name=FBgn0029709.1;Dir=sensecoverage=100.0;identity=99.7;matches=631;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010514
Chr1	stalkie_big_nohaplotig	exon	118106287	118106433	99	-	.	Parent=FBgn0029709.1.mrna1;Target=FBgn0029709.1 487 633 +
Chr1	stalkie_big_nohaplotig	exon	118106501	118106835	99	-	.	Parent=FBgn0029709.1.mrna1;Target=FBgn0029709.1 152 486 +
Chr1	stalkie_big_nohaplotig	exon	118106893	118107043	100	-	.	Parent=FBgn0029709.1.mrna1;Target=FBgn0029709.1 1 151 +
Chr1	stalkie_big_nohaplotig	CDS	118106287	118106433	.	-	0	Parent=FBgn0029709.1.mrna1;Target=FBgn0029709.1 487 633 +
Chr1	stalkie_big_nohaplotig	CDS	118106501	118106835	.	-	2	Parent=FBgn0029709.1.mrna1;Target=FBgn0029709.1 152 486 +
Chr1	stalkie_big_nohaplotig	CDS	118106893	118107043	.	-	0	Parent=FBgn0029709.1.mrna1;Target=FBgn0029709.1 1 151 +
Chr1	gffcl	locus	118239976	118240697	.	-	.	ID=RLOC_00010515;geneIDs=comp156214_c0_seq1.path1;transcripts=comp156214_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118239976	118240697	.	-	.	ID=comp156214_c0_seq1.mrna1;geneID=comp156214_c0_seq1.path1;Name=comp156214_c0_seq1;Dir=sensecoverage=99.1;identity=97.4;matches=643;mismatches=17;indels=0;unknowns=0;locus=RLOC_00010515
Chr1	stalkie_big_nohaplotig	exon	118239976	118240303	99	-	.	Parent=comp156214_c0_seq1.mrna1;Target=comp156214_c0_seq1 335 662 +
Chr1	stalkie_big_nohaplotig	exon	118240366	118240697	95	-	.	Parent=comp156214_c0_seq1.mrna1;Target=comp156214_c0_seq1 3 334 +
Chr1	stalkie_big_nohaplotig	CDS	118240139	118240303	.	-	0	Parent=comp156214_c0_seq1.mrna1;Target=comp156214_c0_seq1 335 499 +
Chr1	stalkie_big_nohaplotig	CDS	118240366	118240476	.	-	0	Parent=comp156214_c0_seq1.mrna1;Target=comp156214_c0_seq1 224 334 +
Chr1	gffcl	locus	118259807	118260281	.	-	.	ID=RLOC_00010516;geneIDs=comp146485_c1_seq1.path1;transcripts=comp146485_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118259807	118260281	.	-	.	ID=comp146485_c1_seq1.mrna1;geneID=comp146485_c1_seq1.path1;Name=comp146485_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=471;mismatches=4;indels=1;unknowns=0;Target=comp146485_c1_seq1 476 1 .;CDS_Target=comp146485_c1_seq1 5 3 .;locus=RLOC_00010516
Chr1	stalkie_big_nohaplotig	exon	118259807	118260281	98	-	.	Parent=comp146485_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	118260277	118260279	.	-	0	Parent=comp146485_c1_seq1.mrna1
Chr1	gffcl	locus	118260311	118261025	.	-	.	ID=RLOC_00010517;geneIDs=comp152751_c0_seq1.path1;transcripts=comp152751_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118260311	118261025	.	-	.	ID=comp152751_c0_seq1.mrna1;geneID=comp152751_c0_seq1.path1;Name=comp152751_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=711;mismatches=3;indels=1;unknowns=0;Target=comp152751_c0_seq1 714 1 .;CDS_Target=comp152751_c0_seq1 508 440 .;locus=RLOC_00010517
Chr1	stalkie_big_nohaplotig	exon	118260311	118261025	99	-	.	Parent=comp152751_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	118260517	118260585	.	-	0	Parent=comp152751_c0_seq1.mrna1
Chr1	gffcl	locus	118261555	118275363	.	-	.	ID=RLOC_00010518;geneIDs=FBgn0000179.1.path1;transcripts=FBgn0000179.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118261555	118275363	.	-	.	ID=FBgn0000179.1.mrna1;geneID=FBgn0000179.1.path1;Name=FBgn0000179.1;Dir=sensecoverage=52.8;identity=99.6;matches=1330;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010518
Chr1	stalkie_big_nohaplotig	exon	118261555	118262408	99	-	.	Parent=FBgn0000179.1.mrna1;Target=FBgn0000179.1 1676 2529 +
Chr1	stalkie_big_nohaplotig	exon	118263142	118263398	100	-	.	Parent=FBgn0000179.1.mrna1;Target=FBgn0000179.1 1419 1675 +
Chr1	stalkie_big_nohaplotig	exon	118274437	118274513	100	-	.	Parent=FBgn0000179.1.mrna1;Target=FBgn0000179.1 1342 1418 +
Chr1	stalkie_big_nohaplotig	exon	118275217	118275363	100	-	.	Parent=FBgn0000179.1.mrna1;Target=FBgn0000179.1 1195 1341 +
Chr1	stalkie_big_nohaplotig	CDS	118261555	118262408	.	-	2	Parent=FBgn0000179.1.mrna1;Target=FBgn0000179.1 1676 2529 +
Chr1	stalkie_big_nohaplotig	CDS	118263142	118263398	.	-	1	Parent=FBgn0000179.1.mrna1;Target=FBgn0000179.1 1419 1675 +
Chr1	stalkie_big_nohaplotig	CDS	118274437	118274513	.	-	0	Parent=FBgn0000179.1.mrna1;Target=FBgn0000179.1 1342 1418 +
Chr1	stalkie_big_nohaplotig	CDS	118275217	118275363	.	-	0	Parent=FBgn0000179.1.mrna1;Target=FBgn0000179.1 1195 1341 +
Chr1	gffcl	locus	118411777	118412385	.	.	.	ID=RLOC_00010519;geneIDs=comp153488_c0_seq1.path1,comp268432_c0_seq1.path1;transcripts=comp268432_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118411777	118412004	.	+	.	ID=comp268432_c0_seq1.mrna1;geneID=comp268432_c0_seq1.path1;Name=comp268432_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=159;mismatches=3;indels=0;unknowns=0;Target=comp268432_c0_seq1 50 3 .;locus=RLOC_00010519
Chr1	stalkie_big_nohaplotig	exon	118411777	118411826	94	+	.	Parent=comp268432_c0_seq1.mrna1;Target=comp268432_c0_seq1 50 1 .
Chr1	stalkie_big_nohaplotig	exon	118411893	118412004	100	+	.	Parent=comp268432_c0_seq1.mrna1;Target=comp268432_c0_seq1 218 107 .
Chr1	stalkie_big_nohaplotig	CDS	118411779	118411826	.	+	0	Parent=comp268432_c0_seq1.mrna1
Chr1	gffcl	locus	118421473	118558372	.	-	.	ID=RLOC_00010520;geneIDs=Megachile.path1,comp148366_c0_seq1.path1,comp162702_c0_seq1.path1,comp449023_c0_seq1.path1;transcripts=comp162702_c0_seq1.mrna1,comp449023_c0_seq1.mrna1,Megachile.mrna1,comp148366_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118421473	118558372	.	-	.	ID=comp162702_c0_seq1.mrna1;geneID=comp162702_c0_seq1.path1;Name=comp162702_c0_seq1;Dir=sensecoverage=98.8;identity=97.4;matches=4811;mismatches=70;indels=58;unknowns=0;locus=RLOC_00010520
Chr1	stalkie_big_nohaplotig	exon	118421473	118421478	100	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4895 4900 +
Chr1	stalkie_big_nohaplotig	exon	118423476	118423480	100	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4890 4894 +
Chr1	stalkie_big_nohaplotig	exon	118426096	118426110	80	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4870 4884 +
Chr1	stalkie_big_nohaplotig	exon	118426795	118426806	91	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4858 4869 +
Chr1	stalkie_big_nohaplotig	exon	118427632	118427635	100	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4854 4857 +
Chr1	stalkie_big_nohaplotig	exon	118435826	118435830	100	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4849 4853 +
Chr1	stalkie_big_nohaplotig	exon	118441832	118441834	100	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4846 4848 +
Chr1	stalkie_big_nohaplotig	exon	118442999	118443009	81	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4835 4845 +
Chr1	stalkie_big_nohaplotig	exon	118449236	118449241	66	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4829 4834 +
Chr1	stalkie_big_nohaplotig	exon	118453203	118453209	100	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4822 4828 +
Chr1	stalkie_big_nohaplotig	exon	118454475	118454480	100	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4816 4821 +
Chr1	stalkie_big_nohaplotig	exon	118463991	118464036	15	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4809 4815 +
Chr1	stalkie_big_nohaplotig	exon	118470600	118470601	100	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4807 4808 +
Chr1	stalkie_big_nohaplotig	exon	118478711	118478717	100	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4800 4806 +
Chr1	stalkie_big_nohaplotig	exon	118482642	118482644	100	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4797 4799 +
Chr1	stalkie_big_nohaplotig	exon	118488798	118488805	100	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4789 4796 +
Chr1	stalkie_big_nohaplotig	exon	118493366	118493407	53	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4745 4788 +
Chr1	stalkie_big_nohaplotig	exon	118508843	118508900	47	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4682 4744 +
Chr1	stalkie_big_nohaplotig	exon	118511862	118511869	77	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4673 4681 +
Chr1	stalkie_big_nohaplotig	exon	118513379	118513380	100	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4671 4672 +
Chr1	stalkie_big_nohaplotig	exon	118517855	118517860	100	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4665 4670 +
Chr1	stalkie_big_nohaplotig	exon	118524972	118524974	100	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4662 4664 +
Chr1	stalkie_big_nohaplotig	exon	118531929	118531933	100	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4657 4661 +
Chr1	stalkie_big_nohaplotig	exon	118539058	118539068	81	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4646 4656 +
Chr1	stalkie_big_nohaplotig	exon	118546944	118546948	100	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 4641 4645 +
Chr1	stalkie_big_nohaplotig	exon	118550047	118552123	99	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 2565 4640 +
Chr1	stalkie_big_nohaplotig	exon	118552180	118552414	99	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 2330 2564 +
Chr1	stalkie_big_nohaplotig	exon	118555776	118555951	100	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 2154 2329 +
Chr1	stalkie_big_nohaplotig	exon	118556012	118556240	100	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 1925 2153 +
Chr1	stalkie_big_nohaplotig	exon	118556397	118557169	98	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 1152 1924 +
Chr1	stalkie_big_nohaplotig	exon	118557223	118558372	99	-	.	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 2 1151 +
Chr1	stalkie_big_nohaplotig	CDS	118550930	118552123	.	-	0	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 2565 3758 +
Chr1	stalkie_big_nohaplotig	CDS	118552180	118552414	.	-	1	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 2330 2564 +
Chr1	stalkie_big_nohaplotig	CDS	118555776	118555951	.	-	0	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 2154 2329 +
Chr1	stalkie_big_nohaplotig	CDS	118556012	118556240	.	-	1	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 1925 2153 +
Chr1	stalkie_big_nohaplotig	CDS	118556397	118557169	.	-	0	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 1152 1924 +
Chr1	stalkie_big_nohaplotig	CDS	118557223	118557786	.	-	0	Parent=comp162702_c0_seq1.mrna1;Target=comp162702_c0_seq1 588 1151 +
Chr1	stalkie_big_nohaplotig	mRNA	118549515	118550063	.	-	.	ID=comp449023_c0_seq1.mrna1;geneID=comp449023_c0_seq1.path1;Name=comp449023_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.3;matches=541;mismatches=4;indels=0;unknowns=0;Target=comp449023_c0_seq1 627 502 .;locus=RLOC_00010520
Chr1	stalkie_big_nohaplotig	exon	118549515	118549655	97	-	.	Parent=comp449023_c0_seq1.mrna1;Target=comp449023_c0_seq1 629 489 .
Chr1	stalkie_big_nohaplotig	exon	118549660	118550063	100	-	.	Parent=comp449023_c0_seq1.mrna1;Target=comp449023_c0_seq1 404 1 .
Chr1	stalkie_big_nohaplotig	CDS	118549517	118549642	.	-	0	Parent=comp449023_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118555052	118555799	.	-	.	ID=comp148366_c0_seq1.mrna1;geneID=comp148366_c0_seq1.path1;Name=comp148366_c0_seq1;Dir=antisensecoverage=100.0;identity=93.9;matches=308;mismatches=20;indels=0;unknowns=0;locus=RLOC_00010520
Chr1	stalkie_big_nohaplotig	exon	118555052	118555355	93	-	.	Parent=comp148366_c0_seq1.mrna1;Target=comp148366_c0_seq1 1 304 -
Chr1	stalkie_big_nohaplotig	exon	118555776	118555799	100	-	.	Parent=comp148366_c0_seq1.mrna1;Target=comp148366_c0_seq1 305 328 -
Chr1	stalkie_big_nohaplotig	CDS	118555322	118555355	.	-	1	Parent=comp148366_c0_seq1.mrna1;Target=comp148366_c0_seq1 271 304 .
Chr1	stalkie_big_nohaplotig	CDS	118555776	118555798	.	-	0	Parent=comp148366_c0_seq1.mrna1;Target=comp148366_c0_seq1 305 327 .
Chr1	gffcl	locus	118463085	118464550	.	+	.	ID=RLOC_00010521;geneIDs=FBgn0033241.2.path1;transcripts=FBgn0033241.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118463085	118464550	.	+	.	ID=FBgn0033241.2.mrna1;geneID=FBgn0033241.2.path1;Name=FBgn0033241.2;Dir=sensecoverage=100.0;identity=98.6;matches=1376;mismatches=19;indels=0;unknowns=0;locus=RLOC_00010521
Chr1	stalkie_big_nohaplotig	exon	118463085	118463489	97	+	.	Parent=FBgn0033241.2.mrna1;Target=FBgn0033241.2 1 405 +
Chr1	stalkie_big_nohaplotig	exon	118463561	118464550	99	+	.	Parent=FBgn0033241.2.mrna1;Target=FBgn0033241.2 406 1395 +
Chr1	stalkie_big_nohaplotig	CDS	118463085	118463489	.	+	0	Parent=FBgn0033241.2.mrna1;Target=FBgn0033241.2 1 405 +
Chr1	stalkie_big_nohaplotig	CDS	118463561	118464550	.	+	0	Parent=FBgn0033241.2.mrna1;Target=FBgn0033241.2 406 1395 +
Chr1	gffcl	locus	118465232	118469589	.	-	.	ID=RLOC_00010522;geneIDs=FBgn0030396.1.path1;transcripts=FBgn0030396.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118465232	118469589	.	-	.	ID=FBgn0030396.1.mrna1;geneID=FBgn0030396.1.path1;Name=FBgn0030396.1;Dir=sensecoverage=97.4;identity=99.5;matches=1215;mismatches=6;indels=0;unknowns=0;locus=RLOC_00010522
Chr1	stalkie_big_nohaplotig	exon	118465232	118465394	100	-	.	Parent=FBgn0030396.1.mrna1;Target=FBgn0030396.1 1092 1254 +
Chr1	stalkie_big_nohaplotig	exon	118466759	118466887	100	-	.	Parent=FBgn0030396.1.mrna1;Target=FBgn0030396.1 963 1091 +
Chr1	stalkie_big_nohaplotig	exon	118468661	118469589	99	-	.	Parent=FBgn0030396.1.mrna1;Target=FBgn0030396.1 34 962 +
Chr1	stalkie_big_nohaplotig	CDS	118465232	118465394	.	-	1	Parent=FBgn0030396.1.mrna1;Target=FBgn0030396.1 1092 1254 +
Chr1	stalkie_big_nohaplotig	CDS	118466759	118466887	.	-	1	Parent=FBgn0030396.1.mrna1;Target=FBgn0030396.1 963 1091 +
Chr1	stalkie_big_nohaplotig	CDS	118468661	118469589	.	-	0	Parent=FBgn0030396.1.mrna1;Target=FBgn0030396.1 34 962 +
Chr1	gffcl	locus	118572345	118573143	.	+	.	ID=RLOC_00010523;geneIDs=comp159389_c4_seq1.path2;transcripts=comp159389_c4_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	118572345	118573143	.	+	.	ID=comp159389_c4_seq1.mrna2;geneID=comp159389_c4_seq1.path2;Name=comp159389_c4_seq1;Dir=indeterminatecoverage=39.8;identity=99.7;matches=797;mismatches=2;indels=0;unknowns=0;Target=comp159389_c4_seq1 1337 539 .;CDS_Target=comp159389_c4_seq1 1161 1066 .;locus=RLOC_00010523
Chr1	stalkie_big_nohaplotig	exon	118572345	118573143	99	+	.	Parent=comp159389_c4_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	118572872	118572967	.	+	0	Parent=comp159389_c4_seq1.mrna2
Chr1	gffcl	locus	118574515	118588801	.	-	.	ID=RLOC_00010524;geneIDs=comp159900_c5_seq1.path1;transcripts=comp159900_c5_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118574515	118588801	.	-	.	ID=comp159900_c5_seq1.mrna1;geneID=comp159900_c5_seq1.path1;Name=comp159900_c5_seq1;Dir=indeterminatecoverage=85.0;identity=95.0;matches=1342;mismatches=30;indels=41;unknowns=0;Target=comp159900_c5_seq1 1277 915 .;locus=RLOC_00010524
Chr1	stalkie_big_nohaplotig	exon	118574515	118575806	97	-	.	Parent=comp159900_c5_seq1.mrna1;Target=comp159900_c5_seq1 1496 189 .
Chr1	stalkie_big_nohaplotig	exon	118584926	118584937	91	-	.	Parent=comp159900_c5_seq1.mrna1;Target=comp159900_c5_seq1 188 177 .
Chr1	stalkie_big_nohaplotig	exon	118585503	118585510	100	-	.	Parent=comp159900_c5_seq1.mrna1;Target=comp159900_c5_seq1 176 169 .
Chr1	stalkie_big_nohaplotig	exon	118585637	118585644	100	-	.	Parent=comp159900_c5_seq1.mrna1;Target=comp159900_c5_seq1 168 161 .
Chr1	stalkie_big_nohaplotig	exon	118586571	118586619	51	-	.	Parent=comp159900_c5_seq1.mrna1;Target=comp159900_c5_seq1 160 95 .
Chr1	stalkie_big_nohaplotig	exon	118588795	118588801	85	-	.	Parent=comp159900_c5_seq1.mrna1;Target=comp159900_c5_seq1 94 88 .
Chr1	stalkie_big_nohaplotig	CDS	118574718	118575080	.	-	0	Parent=comp159900_c5_seq1.mrna1
Chr1	gffcl	locus	118576087	118577076	.	-	.	ID=RLOC_00010525;geneIDs=CPIJ003423.path1;transcripts=CPIJ003423.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118576087	118577076	.	-	.	ID=CPIJ003423.mrna1;geneID=CPIJ003423.path1;Name=CPIJ003423;Dir=indeterminatecoverage=100.0;identity=98.3;matches=973;mismatches=17;indels=0;unknowns=0;Target=CPIJ003423 990 1 .;CDS_Target=CPIJ003423 990 502 .;locus=RLOC_00010525
Chr1	stalkie_big_nohaplotig	exon	118576087	118577076	98	-	.	Parent=CPIJ003423.mrna1
Chr1	stalkie_big_nohaplotig	CDS	118576087	118576575	.	-	0	Parent=CPIJ003423.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118579786	120678919	.	-	.	ID=comp163773_c1_seq1.mrna1;geneID=comp163773_c1_seq1.path1;Name=comp163773_c1_seq1;Dir=antisensecoverage=81.9;identity=90.4;matches=2297;mismatches=95;indels=150;unknowns=0;Target=comp163773_c1_seq1 3 296 .;locus=RLOC_00010526
Chr1	stalkie_big_nohaplotig	exon	118579786	118581594	96	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1 1865 -
Chr1	stalkie_big_nohaplotig	exon	120155816	120155818	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1866 1868 -
Chr1	stalkie_big_nohaplotig	exon	120158382	120158384	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1869 1871 -
Chr1	stalkie_big_nohaplotig	exon	120170503	120170504	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1872 1873 -
Chr1	stalkie_big_nohaplotig	exon	120177766	120177770	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1874 1878 -
Chr1	stalkie_big_nohaplotig	exon	120194126	120194131	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1879 1884 -
Chr1	stalkie_big_nohaplotig	exon	120213998	120214003	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1885 1890 -
Chr1	stalkie_big_nohaplotig	exon	120215762	120215770	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1891 1899 -
Chr1	stalkie_big_nohaplotig	exon	120221745	120221746	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1900 1901 -
Chr1	stalkie_big_nohaplotig	exon	120228960	120228967	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1902 1909 -
Chr1	stalkie_big_nohaplotig	exon	120231591	120231598	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1910 1917 -
Chr1	stalkie_big_nohaplotig	exon	120234481	120234490	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1918 1927 -
Chr1	stalkie_big_nohaplotig	exon	120246097	120246100	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1928 1931 -
Chr1	stalkie_big_nohaplotig	exon	120247889	120247895	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1932 1938 -
Chr1	stalkie_big_nohaplotig	exon	120253513	120253514	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1939 1940 -
Chr1	stalkie_big_nohaplotig	exon	120257809	120257816	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1941 1948 -
Chr1	stalkie_big_nohaplotig	exon	120258687	120258688	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1949 1950 -
Chr1	stalkie_big_nohaplotig	exon	120260656	120260665	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1951 1960 -
Chr1	stalkie_big_nohaplotig	exon	120266096	120266099	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1961 1964 -
Chr1	stalkie_big_nohaplotig	exon	120269876	120269880	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1965 1969 -
Chr1	stalkie_big_nohaplotig	exon	120274959	120274963	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1970 1974 -
Chr1	stalkie_big_nohaplotig	exon	120291224	120291229	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1975 1980 -
Chr1	stalkie_big_nohaplotig	exon	120298456	120298464	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1981 1989 -
Chr1	stalkie_big_nohaplotig	exon	120305077	120305083	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1990 1996 -
Chr1	stalkie_big_nohaplotig	exon	120311462	120311470	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 1997 2005 -
Chr1	stalkie_big_nohaplotig	exon	120313927	120313928	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2006 2007 -
Chr1	stalkie_big_nohaplotig	exon	120321675	120321680	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2008 2013 -
Chr1	stalkie_big_nohaplotig	exon	120322588	120322599	91	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2014 2025 -
Chr1	stalkie_big_nohaplotig	exon	120333111	120333112	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2039 2040 -
Chr1	stalkie_big_nohaplotig	exon	120337305	120337317	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2041 2053 -
Chr1	stalkie_big_nohaplotig	exon	120350347	120350390	44	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2055 2122 -
Chr1	stalkie_big_nohaplotig	exon	120351456	120351463	87	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2123 2130 -
Chr1	stalkie_big_nohaplotig	exon	120359161	120359164	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2131 2134 -
Chr1	stalkie_big_nohaplotig	exon	120370090	120370096	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2135 2141 -
Chr1	stalkie_big_nohaplotig	exon	120375338	120375339	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2142 2143 -
Chr1	stalkie_big_nohaplotig	exon	120381804	120381805	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2144 2145 -
Chr1	stalkie_big_nohaplotig	exon	120395855	120395858	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2146 2149 -
Chr1	stalkie_big_nohaplotig	exon	120401944	120401947	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2150 2153 -
Chr1	stalkie_big_nohaplotig	exon	120407767	120407774	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2154 2161 -
Chr1	stalkie_big_nohaplotig	exon	120427592	120427594	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2162 2164 -
Chr1	stalkie_big_nohaplotig	exon	120491290	120491294	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2165 2169 -
Chr1	stalkie_big_nohaplotig	exon	120496972	120496974	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2170 2172 -
Chr1	stalkie_big_nohaplotig	exon	120509966	120509969	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2173 2176 -
Chr1	stalkie_big_nohaplotig	exon	120526176	120526179	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2177 2180 -
Chr1	stalkie_big_nohaplotig	exon	120534977	120534981	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2181 2185 -
Chr1	stalkie_big_nohaplotig	exon	120536769	120536779	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2186 2196 -
Chr1	stalkie_big_nohaplotig	exon	120608119	120608180	56	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2468 2534 -
Chr1	stalkie_big_nohaplotig	exon	120622535	120622605	60	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2535 2603 -
Chr1	stalkie_big_nohaplotig	exon	120634052	120634057	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2668 2673 -
Chr1	stalkie_big_nohaplotig	exon	120640594	120640601	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2674 2681 -
Chr1	stalkie_big_nohaplotig	exon	120640610	120640615	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2694 2699 -
Chr1	stalkie_big_nohaplotig	exon	120643478	120643486	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2700 2708 -
Chr1	stalkie_big_nohaplotig	exon	120644857	120644874	83	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2709 2723 -
Chr1	stalkie_big_nohaplotig	exon	120645156	120645215	52	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2742 2810 -
Chr1	stalkie_big_nohaplotig	exon	120650659	120650668	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2811 2820 -
Chr1	stalkie_big_nohaplotig	exon	120664052	120664063	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2856 2867 -
Chr1	stalkie_big_nohaplotig	exon	120674144	120674172	35	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2868 2927 -
Chr1	stalkie_big_nohaplotig	exon	120677601	120677602	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2928 2929 -
Chr1	stalkie_big_nohaplotig	exon	120678910	120678919	100	-	.	Parent=comp163773_c1_seq1.mrna1;Target=comp163773_c1_seq1 2930 2939 -
Chr1	stalkie_big_nohaplotig	CDS	118579788	118580081	.	-	0	Parent=comp163773_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120490653	120491541	.	+	.	ID=comp160636_c0_seq1.mrna1;geneID=comp160636_c0_seq1.path1;Name=comp160636_c0_seq1;Dir=indeterminatecoverage=95.5;identity=97.0;matches=869;mismatches=20;indels=7;unknowns=0;Target=comp160636_c0_seq1 931 36 .;CDS_Target=comp160636_c0_seq1 322 209 .;locus=RLOC_00010526
Chr1	stalkie_big_nohaplotig	exon	120490653	120491541	96	+	.	Parent=comp160636_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	120490821	120490934	.	+	0	Parent=comp160636_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120495371	120499281	.	-	.	ID=FBgn0259108.mrna1;geneID=FBgn0259108.path1;Name=FBgn0259108;Dir=sensecoverage=100.0;identity=99.9;matches=3767;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010526
Chr1	stalkie_big_nohaplotig	exon	120495371	120499281	.	-	.	Parent=FBgn0259108.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120495371	120512441	.	-	.	ID=FBgn0259108.mrna1;geneID=FBgn0259108.path1;Name=FBgn0259108;Dir=sensecoverage=79.1;identity=99.8;matches=4168;mismatches=7;indels=0;unknowns=0;locus=RLOC_00010526
Chr1	stalkie_big_nohaplotig	exon	120495371	120495537	100	-	.	Parent=FBgn0259108.mrna1;Target=FBgn0259108 3605 3771 +
Chr1	stalkie_big_nohaplotig	exon	120495621	120497252	99	-	.	Parent=FBgn0259108.mrna1;Target=FBgn0259108 1973 3604 +
Chr1	stalkie_big_nohaplotig	exon	120497310	120499281	99	-	.	Parent=FBgn0259108.mrna1;Target=FBgn0259108 1 1972 +
Chr1	stalkie_big_nohaplotig	exon	120507749	120511368	99	-	.	Parent=FBgn0259108.mrna1;Target=FBgn0259108 1658 5277 +
Chr1	stalkie_big_nohaplotig	exon	120511430	120511588	100	-	.	Parent=FBgn0259108.mrna1;Target=FBgn0259108 1499 1657 +
Chr1	stalkie_big_nohaplotig	exon	120511654	120511876	100	-	.	Parent=FBgn0259108.mrna1;Target=FBgn0259108 1276 1498 +
Chr1	stalkie_big_nohaplotig	exon	120512269	120512441	100	-	.	Parent=FBgn0259108.mrna1;Target=FBgn0259108 1103 1275 +
Chr1	stalkie_big_nohaplotig	CDS	120495371	120495537	.	-	2	Parent=FBgn0259108.mrna1;Target=FBgn0259108 3605 3771 +
Chr1	stalkie_big_nohaplotig	CDS	120495621	120497252	.	-	2	Parent=FBgn0259108.mrna1;Target=FBgn0259108 1973 3604 +
Chr1	stalkie_big_nohaplotig	CDS	120497310	120499281	.	-	0	Parent=FBgn0259108.mrna1;Target=FBgn0259108 1 1972 +
Chr1	stalkie_big_nohaplotig	CDS	120507749	120511368	.	-	2	Parent=FBgn0259108.mrna1;Target=FBgn0259108 1658 5277 +
Chr1	stalkie_big_nohaplotig	CDS	120511430	120511588	.	-	2	Parent=FBgn0259108.mrna1;Target=FBgn0259108 1499 1657 +
Chr1	stalkie_big_nohaplotig	CDS	120511654	120511876	.	-	0	Parent=FBgn0259108.mrna1;Target=FBgn0259108 1276 1498 +
Chr1	stalkie_big_nohaplotig	CDS	120512269	120512439	.	-	0	Parent=FBgn0259108.mrna1;Target=FBgn0259108 1105 1275 +
Chr1	gffcl	locus	118589378	118590289	.	-	.	ID=RLOC_00010527;geneIDs=comp159774_c1_seq1.path2;transcripts=comp159774_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	118589378	118590289	.	-	.	ID=comp159774_c1_seq1.mrna2;geneID=comp159774_c1_seq1.path2;Name=comp159774_c1_seq1;Dir=sensecoverage=100.0;identity=95.1;matches=841;mismatches=16;indels=27;unknowns=0;locus=RLOC_00010527
Chr1	stalkie_big_nohaplotig	exon	118589378	118589984	94	-	.	Parent=comp159774_c1_seq1.mrna2;Target=comp159774_c1_seq1 251 884 +
Chr1	stalkie_big_nohaplotig	exon	118590040	118590289	97	-	.	Parent=comp159774_c1_seq1.mrna2;Target=comp159774_c1_seq1 1 250 +
Chr1	stalkie_big_nohaplotig	CDS	118589631	118589984	.	-	0	Parent=comp159774_c1_seq1.mrna2;Target=comp159774_c1_seq1 251 604 +
Chr1	stalkie_big_nohaplotig	CDS	118590040	118590045	.	-	0	Parent=comp159774_c1_seq1.mrna2;Target=comp159774_c1_seq1 245 250 +
Chr1	gffcl	locus	118782771	118797404	.	+	.	ID=RLOC_00010533;geneIDs=FBgn0028550.1.path1;transcripts=FBgn0028550.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118782771	118797404	.	+	.	ID=FBgn0028550.1.mrna1;geneID=FBgn0028550.1.path1;Name=FBgn0028550.1;Dir=sensecoverage=100.0;identity=99.4;matches=1724;mismatches=10;indels=0;unknowns=0;locus=RLOC_00010533
Chr1	stalkie_big_nohaplotig	exon	118782771	118783013	100	+	.	Parent=FBgn0028550.1.mrna1;Target=FBgn0028550.1 1 243 +
Chr1	stalkie_big_nohaplotig	exon	118783332	118783418	100	+	.	Parent=FBgn0028550.1.mrna1;Target=FBgn0028550.1 244 330 +
Chr1	stalkie_big_nohaplotig	exon	118796001	118797404	99	+	.	Parent=FBgn0028550.1.mrna1;Target=FBgn0028550.1 331 1734 +
Chr1	stalkie_big_nohaplotig	CDS	118782771	118783013	.	+	0	Parent=FBgn0028550.1.mrna1;Target=FBgn0028550.1 1 243 +
Chr1	stalkie_big_nohaplotig	CDS	118783332	118783418	.	+	0	Parent=FBgn0028550.1.mrna1;Target=FBgn0028550.1 244 330 +
Chr1	stalkie_big_nohaplotig	CDS	118796001	118797404	.	+	0	Parent=FBgn0028550.1.mrna1;Target=FBgn0028550.1 331 1734 +
Chr1	gffcl	locus	118799480	118800363	.	+	.	ID=RLOC_00010534;geneIDs=comp149290_c0_seq1.path1;transcripts=comp149290_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118799480	118800363	.	+	.	ID=comp149290_c0_seq1.mrna1;geneID=comp149290_c0_seq1.path1;Name=comp149290_c0_seq1;Dir=indeterminatecoverage=98.7;identity=99.0;matches=876;mismatches=6;indels=3;unknowns=0;Target=comp149290_c0_seq1 895 13 .;CDS_Target=comp149290_c0_seq1 781 701 .;locus=RLOC_00010534
Chr1	stalkie_big_nohaplotig	exon	118799480	118800363	98	+	.	Parent=comp149290_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	118800167	118800247	.	+	0	Parent=comp149290_c0_seq1.mrna1
Chr1	gffcl	locus	118802333	118903729	.	-	.	ID=RLOC_00010535;geneIDs=comp155654_c0_seq1.path1;transcripts=comp155654_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118802333	118903729	.	-	.	ID=comp155654_c0_seq1.mrna1;geneID=comp155654_c0_seq1.path1;Name=comp155654_c0_seq1;Dir=indeterminatecoverage=68.6;identity=91.0;matches=638;mismatches=18;indels=45;unknowns=0;Target=comp155654_c0_seq1 627 595 .;locus=RLOC_00010535
Chr1	stalkie_big_nohaplotig	exon	118802333	118802924	90	-	.	Parent=comp155654_c0_seq1.mrna1;Target=comp155654_c0_seq1 1034 404 .
Chr1	stalkie_big_nohaplotig	exon	118829269	118829277	100	-	.	Parent=comp155654_c0_seq1.mrna1;Target=comp155654_c0_seq1 403 395 .
Chr1	stalkie_big_nohaplotig	exon	118835149	118835156	100	-	.	Parent=comp155654_c0_seq1.mrna1;Target=comp155654_c0_seq1 388 381 .
Chr1	stalkie_big_nohaplotig	exon	118857909	118857919	100	-	.	Parent=comp155654_c0_seq1.mrna1;Target=comp155654_c0_seq1 373 363 .
Chr1	stalkie_big_nohaplotig	exon	118882457	118882465	66	-	.	Parent=comp155654_c0_seq1.mrna1;Target=comp155654_c0_seq1 362 354 .
Chr1	stalkie_big_nohaplotig	exon	118890353	118890363	100	-	.	Parent=comp155654_c0_seq1.mrna1;Target=comp155654_c0_seq1 353 343 .
Chr1	stalkie_big_nohaplotig	exon	118891986	118891990	100	-	.	Parent=comp155654_c0_seq1.mrna1;Target=comp155654_c0_seq1 342 338 .
Chr1	stalkie_big_nohaplotig	exon	118898383	118898385	100	-	.	Parent=comp155654_c0_seq1.mrna1;Target=comp155654_c0_seq1 337 335 .
Chr1	stalkie_big_nohaplotig	exon	118903721	118903729	100	-	.	Parent=comp155654_c0_seq1.mrna1;Target=comp155654_c0_seq1 334 326 .
Chr1	stalkie_big_nohaplotig	CDS	118802733	118802763	.	-	0	Parent=comp155654_c0_seq1.mrna1
Chr1	gffcl	locus	118803044	118803467	.	-	.	ID=RLOC_00010536;geneIDs=comp152241_c0_seq1.path1;transcripts=comp152241_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118803044	118803467	.	-	.	ID=comp152241_c0_seq1.mrna1;geneID=comp152241_c0_seq1.path1;Name=comp152241_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.8;matches=420;mismatches=4;indels=1;unknowns=0;Target=comp152241_c0_seq1 426 2 .;CDS_Target=comp152241_c0_seq1 426 355 .;locus=RLOC_00010536
Chr1	stalkie_big_nohaplotig	exon	118803044	118803467	98	-	.	Parent=comp152241_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	118803044	118803115	.	-	0	Parent=comp152241_c0_seq1.mrna1
Chr1	gffcl	locus	118804351	118804757	.	+	.	ID=RLOC_00010537;geneIDs=comp135033_c1_seq1.path1;transcripts=comp135033_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118804351	118804757	.	+	.	ID=comp135033_c1_seq1.mrna1;geneID=comp135033_c1_seq1.path1;Name=comp135033_c1_seq1;Dir=indeterminatecoverage=96.7;identity=99.8;matches=407;mismatches=0;indels=1;unknowns=0;Target=comp135033_c1_seq1 408 1 .;CDS_Target=comp135033_c1_seq1 371 318 .;locus=RLOC_00010537
Chr1	stalkie_big_nohaplotig	exon	118804351	118804757	99	+	.	Parent=comp135033_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	118804667	118804720	.	+	0	Parent=comp135033_c1_seq1.mrna1
Chr1	gffcl	locus	118854557	118854871	.	-	.	ID=RLOC_00010538;geneIDs=comp149123_c1_seq1.path1;transcripts=comp149123_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118854557	118854871	.	-	.	ID=comp149123_c1_seq1.mrna1;geneID=comp149123_c1_seq1.path1;Name=comp149123_c1_seq1;Dir=indeterminatecoverage=96.0;identity=84.7;matches=287;mismatches=23;indels=29;unknowns=0;Target=comp149123_c1_seq1 334 1 .;CDS_Target=comp149123_c1_seq1 183 1 .;locus=RLOC_00010538
Chr1	stalkie_big_nohaplotig	exon	118854557	118854871	84	-	.	Parent=comp149123_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	118854696	118854871	.	-	0	Parent=comp149123_c1_seq1.mrna1
Chr1	gffcl	locus	118855731	118856058	.	-	.	ID=RLOC_00010539;geneIDs=comp145576_c0_seq1.path1;transcripts=comp145576_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118855731	118856058	.	-	.	ID=comp145576_c0_seq1.mrna1;geneID=comp145576_c0_seq1.path1;Name=comp145576_c0_seq1;Dir=indeterminatecoverage=94.0;identity=99.1;matches=326;mismatches=2;indels=1;unknowns=0;Target=comp145576_c0_seq1 350 22 .;CDS_Target=comp145576_c0_seq1 122 24 .;locus=RLOC_00010539
Chr1	stalkie_big_nohaplotig	exon	118855731	118856058	99	-	.	Parent=comp145576_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	118855958	118856056	.	-	0	Parent=comp145576_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118891619	118970895	.	+	.	ID=comp163514_c1_seq1.mrna1;geneID=comp163514_c1_seq1.path1;Name=comp163514_c1_seq1;Dir=sensecoverage=67.6;identity=99.9;matches=4883;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010540
Chr1	stalkie_big_nohaplotig	exon	118891619	118891911	100	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 1 293 +
Chr1	stalkie_big_nohaplotig	exon	118899552	118899641	100	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 294 383 +
Chr1	stalkie_big_nohaplotig	exon	118899718	118899908	100	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 384 574 +
Chr1	stalkie_big_nohaplotig	exon	118905002	118905034	100	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 575 607 +
Chr1	stalkie_big_nohaplotig	exon	118912617	118912772	100	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 608 763 +
Chr1	stalkie_big_nohaplotig	exon	118917647	118917852	100	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 764 969 +
Chr1	stalkie_big_nohaplotig	exon	118928724	118928852	100	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 970 1098 +
Chr1	stalkie_big_nohaplotig	exon	118932007	118932098	97	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 1099 1190 +
Chr1	stalkie_big_nohaplotig	exon	118932225	118932501	99	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 1191 1467 +
Chr1	stalkie_big_nohaplotig	exon	118932637	118932946	99	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 1468 1777 +
Chr1	stalkie_big_nohaplotig	exon	118933423	118933728	100	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 1778 2083 +
Chr1	stalkie_big_nohaplotig	exon	118941052	118941114	100	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 2084 2146 +
Chr1	stalkie_big_nohaplotig	exon	118942240	118942420	100	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 2147 2327 +
Chr1	stalkie_big_nohaplotig	exon	118942487	118942695	100	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 2328 2536 +
Chr1	stalkie_big_nohaplotig	exon	118943910	118944009	100	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 2537 2636 +
Chr1	stalkie_big_nohaplotig	exon	118944094	118944162	100	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 2637 2705 +
Chr1	stalkie_big_nohaplotig	exon	118950438	118950691	100	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 2706 2959 +
Chr1	stalkie_big_nohaplotig	exon	118950759	118950932	100	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 2960 3133 +
Chr1	stalkie_big_nohaplotig	exon	118951966	118952128	100	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 3134 3296 +
Chr1	stalkie_big_nohaplotig	exon	118954992	118955467	100	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 3297 3772 +
Chr1	stalkie_big_nohaplotig	exon	118958029	118958240	100	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 3773 3984 +
Chr1	stalkie_big_nohaplotig	exon	118958390	118958872	100	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 3985 4467 +
Chr1	stalkie_big_nohaplotig	exon	118959622	118959795	100	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 4468 4641 +
Chr1	stalkie_big_nohaplotig	exon	118967208	118967330	100	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 4642 4764 +
Chr1	stalkie_big_nohaplotig	exon	118970773	118970895	100	+	.	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 4765 4887 +
Chr1	stalkie_big_nohaplotig	CDS	118899759	118899908	.	+	0	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 425 574 +
Chr1	stalkie_big_nohaplotig	CDS	118905002	118905034	.	+	0	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 575 607 +
Chr1	stalkie_big_nohaplotig	CDS	118912617	118912772	.	+	0	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 608 763 +
Chr1	stalkie_big_nohaplotig	CDS	118917647	118917852	.	+	0	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 764 969 +
Chr1	stalkie_big_nohaplotig	CDS	118928724	118928852	.	+	1	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 970 1098 +
Chr1	stalkie_big_nohaplotig	CDS	118932007	118932098	.	+	1	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 1099 1190 +
Chr1	stalkie_big_nohaplotig	CDS	118932225	118932501	.	+	2	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 1191 1467 +
Chr1	stalkie_big_nohaplotig	CDS	118932637	118932946	.	+	1	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 1468 1777 +
Chr1	stalkie_big_nohaplotig	CDS	118933423	118933728	.	+	0	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 1778 2083 +
Chr1	stalkie_big_nohaplotig	CDS	118941052	118941114	.	+	0	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 2084 2146 +
Chr1	stalkie_big_nohaplotig	CDS	118942240	118942420	.	+	0	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 2147 2327 +
Chr1	stalkie_big_nohaplotig	CDS	118942487	118942695	.	+	2	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 2328 2536 +
Chr1	stalkie_big_nohaplotig	CDS	118943910	118944009	.	+	0	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 2537 2636 +
Chr1	stalkie_big_nohaplotig	CDS	118944094	118944162	.	+	2	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 2637 2705 +
Chr1	stalkie_big_nohaplotig	CDS	118950438	118950691	.	+	2	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 2706 2959 +
Chr1	stalkie_big_nohaplotig	CDS	118950759	118950932	.	+	0	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 2960 3133 +
Chr1	stalkie_big_nohaplotig	CDS	118951966	118952128	.	+	0	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 3134 3296 +
Chr1	stalkie_big_nohaplotig	CDS	118954992	118955197	.	+	2	Parent=comp163514_c1_seq1.mrna1;Target=comp163514_c1_seq1 3297 3502 +
Chr1	stalkie_big_nohaplotig	mRNA	118899756	119086934	.	+	.	ID=FBgn0264255.1.mrna1;geneID=FBgn0264255.1.path1;Name=FBgn0264255.1;Dir=sensecoverage=73.3;identity=99.8;matches=4483;mismatches=8;indels=0;unknowns=0;locus=RLOC_00010540
Chr1	stalkie_big_nohaplotig	exon	118899756	118899908	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 1 153 +
Chr1	stalkie_big_nohaplotig	exon	118905002	118905034	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 154 186 +
Chr1	stalkie_big_nohaplotig	exon	118912617	118912772	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 187 342 +
Chr1	stalkie_big_nohaplotig	exon	118917647	118917852	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 343 548 +
Chr1	stalkie_big_nohaplotig	exon	118928724	118928852	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 549 677 +
Chr1	stalkie_big_nohaplotig	exon	118932007	118932098	97	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 678 769 +
Chr1	stalkie_big_nohaplotig	exon	118932225	118932501	99	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 770 1046 +
Chr1	stalkie_big_nohaplotig	exon	118932637	118932946	99	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 1047 1356 +
Chr1	stalkie_big_nohaplotig	exon	118933423	118933728	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 1357 1662 +
Chr1	stalkie_big_nohaplotig	exon	118941052	118941114	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 1663 1725 +
Chr1	stalkie_big_nohaplotig	exon	118942240	118942420	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 1726 1906 +
Chr1	stalkie_big_nohaplotig	exon	118942487	118942695	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 1907 2115 +
Chr1	stalkie_big_nohaplotig	exon	118943910	118944009	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 2116 2215 +
Chr1	stalkie_big_nohaplotig	exon	118944094	118944162	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 2216 2284 +
Chr1	stalkie_big_nohaplotig	exon	118950414	118950691	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 2285 2562 +
Chr1	stalkie_big_nohaplotig	exon	118950759	118950932	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 2563 2736 +
Chr1	stalkie_big_nohaplotig	exon	118951966	118952128	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 2737 2899 +
Chr1	stalkie_big_nohaplotig	exon	118954992	118955179	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 2900 3087 +
Chr1	stalkie_big_nohaplotig	exon	118955263	118955467	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 3088 3292 +
Chr1	stalkie_big_nohaplotig	exon	118958029	118958240	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 3293 3504 +
Chr1	stalkie_big_nohaplotig	exon	118958390	118958872	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 3505 3987 +
Chr1	stalkie_big_nohaplotig	exon	118959622	118959795	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 3988 4161 +
Chr1	stalkie_big_nohaplotig	exon	118967208	118967330	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4162 4284 +
Chr1	stalkie_big_nohaplotig	exon	118970773	118970890	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4285 4402 +
Chr1	stalkie_big_nohaplotig	exon	118978020	118978024	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4403 4407 +
Chr1	stalkie_big_nohaplotig	exon	119002188	119002193	66	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4408 4413 +
Chr1	stalkie_big_nohaplotig	exon	119010212	119010218	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4414 4420 +
Chr1	stalkie_big_nohaplotig	exon	119012488	119012490	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4421 4423 +
Chr1	stalkie_big_nohaplotig	exon	119015924	119015935	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4424 4435 +
Chr1	stalkie_big_nohaplotig	exon	119040223	119040229	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4441 4447 +
Chr1	stalkie_big_nohaplotig	exon	119050688	119050691	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4448 4451 +
Chr1	stalkie_big_nohaplotig	exon	119058010	119058020	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4452 4462 +
Chr1	stalkie_big_nohaplotig	exon	119064884	119064885	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4571 4572 +
Chr1	stalkie_big_nohaplotig	exon	119071466	119071474	77	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4573 4581 +
Chr1	stalkie_big_nohaplotig	exon	119076931	119076934	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4582 4585 +
Chr1	stalkie_big_nohaplotig	exon	119079581	119079590	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4586 4595 +
Chr1	stalkie_big_nohaplotig	exon	119086928	119086934	100	+	.	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4657 4663 +
Chr1	stalkie_big_nohaplotig	CDS	118899756	118899908	.	+	0	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 1 153 +
Chr1	stalkie_big_nohaplotig	CDS	118905002	118905034	.	+	0	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 154 186 +
Chr1	stalkie_big_nohaplotig	CDS	118912617	118912772	.	+	0	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 187 342 +
Chr1	stalkie_big_nohaplotig	CDS	118917647	118917852	.	+	0	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 343 548 +
Chr1	stalkie_big_nohaplotig	CDS	118928724	118928852	.	+	1	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 549 677 +
Chr1	stalkie_big_nohaplotig	CDS	118932007	118932098	.	+	1	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 678 769 +
Chr1	stalkie_big_nohaplotig	CDS	118932225	118932501	.	+	2	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 770 1046 +
Chr1	stalkie_big_nohaplotig	CDS	118932637	118932946	.	+	1	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 1047 1356 +
Chr1	stalkie_big_nohaplotig	CDS	118933423	118933728	.	+	0	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 1357 1662 +
Chr1	stalkie_big_nohaplotig	CDS	118941052	118941114	.	+	0	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 1663 1725 +
Chr1	stalkie_big_nohaplotig	CDS	118942240	118942420	.	+	0	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 1726 1906 +
Chr1	stalkie_big_nohaplotig	CDS	118942487	118942695	.	+	2	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 1907 2115 +
Chr1	stalkie_big_nohaplotig	CDS	118943910	118944009	.	+	0	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 2116 2215 +
Chr1	stalkie_big_nohaplotig	CDS	118944094	118944162	.	+	2	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 2216 2284 +
Chr1	stalkie_big_nohaplotig	CDS	118950414	118950691	.	+	2	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 2285 2562 +
Chr1	stalkie_big_nohaplotig	CDS	118950759	118950932	.	+	0	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 2563 2736 +
Chr1	stalkie_big_nohaplotig	CDS	118951966	118952128	.	+	0	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 2737 2899 +
Chr1	stalkie_big_nohaplotig	CDS	118954992	118955179	.	+	2	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 2900 3087 +
Chr1	stalkie_big_nohaplotig	CDS	118955263	118955467	.	+	0	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 3088 3292 +
Chr1	stalkie_big_nohaplotig	CDS	118958029	118958240	.	+	2	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 3293 3504 +
Chr1	stalkie_big_nohaplotig	CDS	118958390	118958872	.	+	0	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 3505 3987 +
Chr1	stalkie_big_nohaplotig	CDS	118959622	118959795	.	+	0	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 3988 4161 +
Chr1	stalkie_big_nohaplotig	CDS	118967208	118967330	.	+	0	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4162 4284 +
Chr1	stalkie_big_nohaplotig	CDS	118970773	118970890	.	+	0	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4285 4402 +
Chr1	stalkie_big_nohaplotig	CDS	118978020	118978024	.	+	2	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4403 4407 +
Chr1	stalkie_big_nohaplotig	CDS	119002188	119002193	.	+	0	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4408 4413 +
Chr1	stalkie_big_nohaplotig	CDS	119010212	119010218	.	+	0	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4414 4420 +
Chr1	stalkie_big_nohaplotig	CDS	119012488	119012490	.	+	2	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4421 4423 +
Chr1	stalkie_big_nohaplotig	CDS	119015924	119015935	.	+	2	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4424 4435 +
Chr1	stalkie_big_nohaplotig	CDS	119040223	119040229	.	+	2	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4441 4447 +
Chr1	stalkie_big_nohaplotig	CDS	119050688	119050691	.	+	1	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4448 4451 +
Chr1	stalkie_big_nohaplotig	CDS	119058010	119058020	.	+	0	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4452 4462 +
Chr1	stalkie_big_nohaplotig	CDS	119064884	119064885	.	+	1	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4571 4572 +
Chr1	stalkie_big_nohaplotig	CDS	119071466	119071474	.	+	2	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4573 4581 +
Chr1	stalkie_big_nohaplotig	CDS	119076931	119076934	.	+	2	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4582 4585 +
Chr1	stalkie_big_nohaplotig	CDS	119079581	119079590	.	+	1	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4586 4595 +
Chr1	stalkie_big_nohaplotig	CDS	119086928	119086934	.	+	0	Parent=FBgn0264255.1.mrna1;Target=FBgn0264255.1 4657 4663 +
Chr1	gffcl	locus	118996541	119010953	.	+	.	ID=RLOC_00010541;geneIDs=FBgn0261444.path1;transcripts=FBgn0261444.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	118996541	119010953	.	+	.	ID=FBgn0261444.mrna1;geneID=FBgn0261444.path1;Name=FBgn0261444;Dir=sensecoverage=17.4;identity=99.0;matches=284;mismatches=2;indels=1;unknowns=0;Target=FBgn0261444 153 164 +;locus=RLOC_00010541
Chr1	stalkie_big_nohaplotig	exon	118996541	118996731	98	+	.	Parent=FBgn0261444.mrna1;Target=FBgn0261444 152 343 +
Chr1	stalkie_big_nohaplotig	exon	119010859	119010953	100	+	.	Parent=FBgn0261444.mrna1;Target=FBgn0261444 344 438 +
Chr1	stalkie_big_nohaplotig	CDS	118996542	118996552	.	+	0	Parent=FBgn0261444.mrna1
Chr1	gffcl	locus	119034032	119034691	.	-	.	ID=RLOC_00010542;geneIDs=comp138946_c0_seq1.path1;transcripts=comp138946_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119034032	119034691	.	-	.	ID=comp138946_c0_seq1.mrna1;geneID=comp138946_c0_seq1.path1;Name=comp138946_c0_seq1;Dir=indeterminatecoverage=98.8;identity=98.6;matches=651;mismatches=9;indels=0;unknowns=0;Target=comp138946_c0_seq1 667 8 .;CDS_Target=comp138946_c0_seq1 558 466 .;locus=RLOC_00010542
Chr1	stalkie_big_nohaplotig	exon	119034032	119034691	98	-	.	Parent=comp138946_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	119034141	119034233	.	-	0	Parent=comp138946_c0_seq1.mrna1
Chr1	gffcl	locus	119060832	119068588	.	+	.	ID=RLOC_00010543;geneIDs=FBgn0051559.1.path2;transcripts=FBgn0051559.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	119060832	119068588	.	+	.	ID=FBgn0051559.1.mrna2;geneID=FBgn0051559.1.path2;Name=FBgn0051559.1;Dir=sensecoverage=24.0;identity=99.8;matches=470;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010543
Chr1	stalkie_big_nohaplotig	exon	119060832	119061065	100	+	.	Parent=FBgn0051559.1.mrna2;Target=FBgn0051559.1 1489 1722 +
Chr1	stalkie_big_nohaplotig	exon	119068241	119068306	100	+	.	Parent=FBgn0051559.1.mrna2;Target=FBgn0051559.1 1723 1788 +
Chr1	stalkie_big_nohaplotig	exon	119068418	119068588	99	+	.	Parent=FBgn0051559.1.mrna2;Target=FBgn0051559.1 1789 1959 +
Chr1	stalkie_big_nohaplotig	CDS	119060832	119061065	.	+	0	Parent=FBgn0051559.1.mrna2;Target=FBgn0051559.1 1489 1722 +
Chr1	stalkie_big_nohaplotig	CDS	119068241	119068306	.	+	0	Parent=FBgn0051559.1.mrna2;Target=FBgn0051559.1 1723 1788 +
Chr1	stalkie_big_nohaplotig	CDS	119068418	119068588	.	+	0	Parent=FBgn0051559.1.mrna2;Target=FBgn0051559.1 1789 1959 +
Chr1	gffcl	locus	119087821	119089698	.	-	.	ID=RLOC_00010544;geneIDs=FBgn0029672.1.path1;transcripts=FBgn0029672.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119087821	119089698	.	-	.	ID=FBgn0029672.1.mrna1;geneID=FBgn0029672.1.path1;Name=FBgn0029672.1;Dir=sensecoverage=100.0;identity=99.5;matches=1531;mismatches=8;indels=0;unknowns=0;locus=RLOC_00010544
Chr1	stalkie_big_nohaplotig	exon	119087821	119087934	98	-	.	Parent=FBgn0029672.1.mrna1;Target=FBgn0029672.1 1426 1539 +
Chr1	stalkie_big_nohaplotig	exon	119087995	119088188	98	-	.	Parent=FBgn0029672.1.mrna1;Target=FBgn0029672.1 1232 1425 +
Chr1	stalkie_big_nohaplotig	exon	119088270	119088605	99	-	.	Parent=FBgn0029672.1.mrna1;Target=FBgn0029672.1 896 1231 +
Chr1	stalkie_big_nohaplotig	exon	119088667	119089302	99	-	.	Parent=FBgn0029672.1.mrna1;Target=FBgn0029672.1 260 895 +
Chr1	stalkie_big_nohaplotig	exon	119089371	119089488	100	-	.	Parent=FBgn0029672.1.mrna1;Target=FBgn0029672.1 142 259 +
Chr1	stalkie_big_nohaplotig	exon	119089558	119089698	100	-	.	Parent=FBgn0029672.1.mrna1;Target=FBgn0029672.1 1 141 +
Chr1	stalkie_big_nohaplotig	CDS	119087821	119087934	.	-	0	Parent=FBgn0029672.1.mrna1;Target=FBgn0029672.1 1426 1539 +
Chr1	stalkie_big_nohaplotig	CDS	119087995	119088188	.	-	2	Parent=FBgn0029672.1.mrna1;Target=FBgn0029672.1 1232 1425 +
Chr1	stalkie_big_nohaplotig	CDS	119088270	119088605	.	-	2	Parent=FBgn0029672.1.mrna1;Target=FBgn0029672.1 896 1231 +
Chr1	stalkie_big_nohaplotig	CDS	119088667	119089302	.	-	2	Parent=FBgn0029672.1.mrna1;Target=FBgn0029672.1 260 895 +
Chr1	stalkie_big_nohaplotig	CDS	119089371	119089488	.	-	0	Parent=FBgn0029672.1.mrna1;Target=FBgn0029672.1 142 259 +
Chr1	stalkie_big_nohaplotig	CDS	119089558	119089698	.	-	0	Parent=FBgn0029672.1.mrna1;Target=FBgn0029672.1 1 141 +
Chr1	gffcl	locus	119090178	119090759	.	+	.	ID=RLOC_00010545;geneIDs=FBgn0030291.1.path1;transcripts=FBgn0030291.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119090178	119090759	.	+	.	ID=FBgn0030291.1.mrna1;geneID=FBgn0030291.1.path1;Name=FBgn0030291.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=579;mismatches=3;indels=0;unknowns=0;Target=FBgn0030291.1 582 1 .;locus=RLOC_00010545
Chr1	stalkie_big_nohaplotig	exon	119090178	119090759	99	+	.	Parent=FBgn0030291.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	119090178	119090759	.	+	0	Parent=FBgn0030291.1.mrna1
Chr1	gffcl	locus	119091369	119092383	.	-	.	ID=RLOC_00010546;geneIDs=FBgn0028693.1.path1;transcripts=FBgn0028693.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119091369	119092383	.	-	.	ID=FBgn0028693.1.mrna1;geneID=FBgn0028693.1.path1;Name=FBgn0028693.1;Dir=sensecoverage=100.0;identity=99.9;matches=815;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010546
Chr1	stalkie_big_nohaplotig	exon	119091369	119091671	100	-	.	Parent=FBgn0028693.1.mrna1;Target=FBgn0028693.1 514 816 +
Chr1	stalkie_big_nohaplotig	exon	119091729	119091936	99	-	.	Parent=FBgn0028693.1.mrna1;Target=FBgn0028693.1 306 513 +
Chr1	stalkie_big_nohaplotig	exon	119091996	119092171	100	-	.	Parent=FBgn0028693.1.mrna1;Target=FBgn0028693.1 130 305 +
Chr1	stalkie_big_nohaplotig	exon	119092255	119092383	100	-	.	Parent=FBgn0028693.1.mrna1;Target=FBgn0028693.1 1 129 +
Chr1	stalkie_big_nohaplotig	CDS	119091369	119091671	.	-	0	Parent=FBgn0028693.1.mrna1;Target=FBgn0028693.1 514 816 +
Chr1	stalkie_big_nohaplotig	CDS	119091729	119091936	.	-	1	Parent=FBgn0028693.1.mrna1;Target=FBgn0028693.1 306 513 +
Chr1	stalkie_big_nohaplotig	CDS	119091996	119092171	.	-	0	Parent=FBgn0028693.1.mrna1;Target=FBgn0028693.1 130 305 +
Chr1	stalkie_big_nohaplotig	CDS	119092255	119092383	.	-	0	Parent=FBgn0028693.1.mrna1;Target=FBgn0028693.1 1 129 +
Chr1	gffcl	locus	119093987	119096371	.	+	.	ID=RLOC_00010547;geneIDs=FBgn0030293.1.path1;transcripts=FBgn0030293.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119093987	119096371	.	+	.	ID=FBgn0030293.1.mrna1;geneID=FBgn0030293.1.path1;Name=FBgn0030293.1;Dir=indeterminatecoverage=99.7;identity=99.9;matches=2383;mismatches=2;indels=0;unknowns=0;Target=FBgn0030293.1 2391 7 .;locus=RLOC_00010547
Chr1	stalkie_big_nohaplotig	exon	119093987	119096371	99	+	.	Parent=FBgn0030293.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	119093987	119096371	.	+	0	Parent=FBgn0030293.1.mrna1
Chr1	gffcl	locus	119103024	119104412	.	+	.	ID=RLOC_00010548;geneIDs=FBgn0025640.4.path2;transcripts=FBgn0025640.4.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	119103024	119104412	.	+	.	ID=FBgn0025640.4.mrna2;geneID=FBgn0025640.4.path2;Name=FBgn0025640.4;Dir=sensecoverage=100.0;identity=98.9;matches=991;mismatches=11;indels=0;unknowns=0;locus=RLOC_00010548
Chr1	stalkie_big_nohaplotig	exon	119103024	119103121	100	+	.	Parent=FBgn0025640.4.mrna2;Target=FBgn0025640.4 1 98 +
Chr1	stalkie_big_nohaplotig	exon	119103173	119103305	100	+	.	Parent=FBgn0025640.4.mrna2;Target=FBgn0025640.4 99 231 +
Chr1	stalkie_big_nohaplotig	exon	119103357	119103446	100	+	.	Parent=FBgn0025640.4.mrna2;Target=FBgn0025640.4 232 321 +
Chr1	stalkie_big_nohaplotig	exon	119103617	119103745	98	+	.	Parent=FBgn0025640.4.mrna2;Target=FBgn0025640.4 322 450 +
Chr1	stalkie_big_nohaplotig	exon	119103801	119103997	98	+	.	Parent=FBgn0025640.4.mrna2;Target=FBgn0025640.4 451 647 +
Chr1	stalkie_big_nohaplotig	exon	119104058	119104412	98	+	.	Parent=FBgn0025640.4.mrna2;Target=FBgn0025640.4 648 1002 +
Chr1	stalkie_big_nohaplotig	CDS	119103024	119103121	.	+	0	Parent=FBgn0025640.4.mrna2;Target=FBgn0025640.4 1 98 +
Chr1	stalkie_big_nohaplotig	CDS	119103173	119103305	.	+	1	Parent=FBgn0025640.4.mrna2;Target=FBgn0025640.4 99 231 +
Chr1	stalkie_big_nohaplotig	CDS	119103357	119103446	.	+	0	Parent=FBgn0025640.4.mrna2;Target=FBgn0025640.4 232 321 +
Chr1	stalkie_big_nohaplotig	CDS	119103617	119103745	.	+	0	Parent=FBgn0025640.4.mrna2;Target=FBgn0025640.4 322 450 +
Chr1	stalkie_big_nohaplotig	CDS	119103801	119103997	.	+	0	Parent=FBgn0025640.4.mrna2;Target=FBgn0025640.4 451 647 +
Chr1	stalkie_big_nohaplotig	CDS	119104058	119104412	.	+	1	Parent=FBgn0025640.4.mrna2;Target=FBgn0025640.4 648 1002 +
Chr1	gffcl	locus	119119018	119120499	.	+	.	ID=RLOC_00010549;geneIDs=FBgn0051559.1.path1;transcripts=FBgn0051559.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119119018	119120499	.	+	.	ID=FBgn0051559.1.mrna1;geneID=FBgn0051559.1.path1;Name=FBgn0051559.1;Dir=indeterminatecoverage=76.0;identity=99.5;matches=1481;mismatches=1;indels=6;unknowns=0;Target=FBgn0051559.1 1488 1 .;locus=RLOC_00010549
Chr1	stalkie_big_nohaplotig	exon	119119018	119120499	99	+	.	Parent=FBgn0051559.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	119119018	119120499	.	+	0	Parent=FBgn0051559.1.mrna1
Chr1	gffcl	locus	119144702	119146092	.	-	.	ID=RLOC_00010550;geneIDs=comp150331_c0_seq1.path1;transcripts=comp150331_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119144702	119146092	.	-	.	ID=comp150331_c0_seq1.mrna1;geneID=comp150331_c0_seq1.path1;Name=comp150331_c0_seq1;Dir=sensecoverage=100.0;identity=98.8;matches=1160;mismatches=5;indels=9;unknowns=0;Target=comp150331_c0_seq1 939 1109 +;locus=RLOC_00010550
Chr1	stalkie_big_nohaplotig	exon	119144702	119145429	100	-	.	Parent=comp150331_c0_seq1.mrna1;Target=comp150331_c0_seq1 447 1174 +
Chr1	stalkie_big_nohaplotig	exon	119145656	119146092	96	-	.	Parent=comp150331_c0_seq1.mrna1;Target=comp150331_c0_seq1 1 446 +
Chr1	stalkie_big_nohaplotig	CDS	119144767	119144937	.	-	0	Parent=comp150331_c0_seq1.mrna1
Chr1	gffcl	locus	119160064	119169365	.	-	.	ID=RLOC_00010551;geneIDs=FBgn0263705.path1;transcripts=FBgn0263705.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119160064	119169365	.	-	.	ID=FBgn0263705.mrna1;geneID=FBgn0263705.path1;Name=FBgn0263705;Dir=sensecoverage=100.0;identity=99.6;matches=5136;mismatches=22;indels=1;unknowns=0;locus=RLOC_00010551
Chr1	stalkie_big_nohaplotig	exon	119160064	119164727	99	-	.	Parent=FBgn0263705.mrna1;Target=FBgn0263705 496 5160 +
Chr1	stalkie_big_nohaplotig	exon	119164795	119165115	98	-	.	Parent=FBgn0263705.mrna1;Target=FBgn0263705 175 495 +
Chr1	stalkie_big_nohaplotig	exon	119169193	119169365	98	-	.	Parent=FBgn0263705.mrna1;Target=FBgn0263705 2 174 +
Chr1	stalkie_big_nohaplotig	CDS	119160064	119164727	.	-	0	Parent=FBgn0263705.mrna1;Target=FBgn0263705 496 5160 +
Chr1	stalkie_big_nohaplotig	CDS	119164795	119165115	.	-	0	Parent=FBgn0263705.mrna1;Target=FBgn0263705 175 495 +
Chr1	stalkie_big_nohaplotig	CDS	119169193	119169363	.	-	0	Parent=FBgn0263705.mrna1;Target=FBgn0263705 4 174 +
Chr1	gffcl	locus	119200349	119201922	.	-	.	ID=RLOC_00010552;geneIDs=comp151980_c0_seq1.path1;transcripts=comp151980_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119200349	119201922	.	-	.	ID=comp151980_c0_seq1.mrna1;geneID=comp151980_c0_seq1.path1;Name=comp151980_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.5;matches=1569;mismatches=5;indels=3;unknowns=0;Target=comp151980_c0_seq1 1577 1 .;CDS_Target=comp151980_c0_seq1 406 251 .;locus=RLOC_00010552
Chr1	stalkie_big_nohaplotig	exon	119200349	119201922	99	-	.	Parent=comp151980_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	119201517	119201672	.	-	0	Parent=comp151980_c0_seq1.mrna1
Chr1	gffcl	locus	119225945	119228884	.	-	.	ID=RLOC_00010554;geneIDs=FBgn0003079.1.path1;transcripts=FBgn0003079.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119225945	119228884	.	-	.	ID=FBgn0003079.1.mrna1;geneID=FBgn0003079.1.path1;Name=FBgn0003079.1;Dir=sensecoverage=100.0;identity=100.0;matches=2246;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010554
Chr1	stalkie_big_nohaplotig	exon	119225945	119226518	100	-	.	Parent=FBgn0003079.1.mrna1;Target=FBgn0003079.1 1674 2247 +
Chr1	stalkie_big_nohaplotig	exon	119226578	119226951	100	-	.	Parent=FBgn0003079.1.mrna1;Target=FBgn0003079.1 1300 1673 +
Chr1	stalkie_big_nohaplotig	exon	119227035	119227181	100	-	.	Parent=FBgn0003079.1.mrna1;Target=FBgn0003079.1 1153 1299 +
Chr1	stalkie_big_nohaplotig	exon	119227610	119227735	100	-	.	Parent=FBgn0003079.1.mrna1;Target=FBgn0003079.1 1027 1152 +
Chr1	stalkie_big_nohaplotig	exon	119227795	119228343	100	-	.	Parent=FBgn0003079.1.mrna1;Target=FBgn0003079.1 478 1026 +
Chr1	stalkie_big_nohaplotig	exon	119228408	119228884	99	-	.	Parent=FBgn0003079.1.mrna1;Target=FBgn0003079.1 1 477 +
Chr1	stalkie_big_nohaplotig	CDS	119225945	119226518	.	-	1	Parent=FBgn0003079.1.mrna1;Target=FBgn0003079.1 1674 2247 +
Chr1	stalkie_big_nohaplotig	CDS	119226578	119226951	.	-	0	Parent=FBgn0003079.1.mrna1;Target=FBgn0003079.1 1300 1673 +
Chr1	stalkie_big_nohaplotig	CDS	119227035	119227181	.	-	0	Parent=FBgn0003079.1.mrna1;Target=FBgn0003079.1 1153 1299 +
Chr1	stalkie_big_nohaplotig	CDS	119227610	119227735	.	-	0	Parent=FBgn0003079.1.mrna1;Target=FBgn0003079.1 1027 1152 +
Chr1	stalkie_big_nohaplotig	CDS	119227795	119228343	.	-	0	Parent=FBgn0003079.1.mrna1;Target=FBgn0003079.1 478 1026 +
Chr1	stalkie_big_nohaplotig	CDS	119228408	119228884	.	-	0	Parent=FBgn0003079.1.mrna1;Target=FBgn0003079.1 1 477 +
Chr1	gffcl	locus	119231577	119232909	.	+	.	ID=RLOC_00010555;geneIDs=FBgn0030468.1.path1;transcripts=FBgn0030468.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119231577	119232909	.	+	.	ID=FBgn0030468.1.mrna1;geneID=FBgn0030468.1.path1;Name=FBgn0030468.1;Dir=sensecoverage=100.0;identity=99.6;matches=717;mismatches=2;indels=1;unknowns=0;locus=RLOC_00010555
Chr1	stalkie_big_nohaplotig	exon	119231577	119231619	100	+	.	Parent=FBgn0030468.1.mrna1;Target=FBgn0030468.1 1 43 +
Chr1	stalkie_big_nohaplotig	exon	119231694	119231813	100	+	.	Parent=FBgn0030468.1.mrna1;Target=FBgn0030468.1 44 163 +
Chr1	stalkie_big_nohaplotig	exon	119231905	119232029	100	+	.	Parent=FBgn0030468.1.mrna1;Target=FBgn0030468.1 164 288 +
Chr1	stalkie_big_nohaplotig	exon	119232254	119232389	99	+	.	Parent=FBgn0030468.1.mrna1;Target=FBgn0030468.1 289 424 +
Chr1	stalkie_big_nohaplotig	exon	119232545	119232651	99	+	.	Parent=FBgn0030468.1.mrna1;Target=FBgn0030468.1 425 531 +
Chr1	stalkie_big_nohaplotig	exon	119232722	119232909	99	+	.	Parent=FBgn0030468.1.mrna1;Target=FBgn0030468.1 532 720 +
Chr1	stalkie_big_nohaplotig	CDS	119231577	119231619	.	+	0	Parent=FBgn0030468.1.mrna1;Target=FBgn0030468.1 1 43 +
Chr1	stalkie_big_nohaplotig	CDS	119231694	119231813	.	+	2	Parent=FBgn0030468.1.mrna1;Target=FBgn0030468.1 44 163 +
Chr1	stalkie_big_nohaplotig	CDS	119231905	119232029	.	+	2	Parent=FBgn0030468.1.mrna1;Target=FBgn0030468.1 164 288 +
Chr1	stalkie_big_nohaplotig	CDS	119232254	119232389	.	+	0	Parent=FBgn0030468.1.mrna1;Target=FBgn0030468.1 289 424 +
Chr1	stalkie_big_nohaplotig	CDS	119232545	119232651	.	+	2	Parent=FBgn0030468.1.mrna1;Target=FBgn0030468.1 425 531 +
Chr1	stalkie_big_nohaplotig	CDS	119232722	119232909	.	+	0	Parent=FBgn0030468.1.mrna1;Target=FBgn0030468.1 532 720 +
Chr1	gffcl	locus	119253786	119260525	.	+	.	ID=RLOC_00010556;geneIDs=comp493_c0_seq1.path1;transcripts=comp493_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119253786	119260525	.	+	.	ID=comp493_c0_seq1.mrna1;geneID=comp493_c0_seq1.path1;Name=comp493_c0_seq1;Dir=antisensecoverage=96.5;identity=98.1;matches=403;mismatches=8;indels=0;unknowns=0;Target=comp493_c0_seq1 335 424 .;locus=RLOC_00010556
Chr1	stalkie_big_nohaplotig	exon	119253786	119254032	99	+	.	Parent=comp493_c0_seq1.mrna1;Target=comp493_c0_seq1 180 426 -
Chr1	stalkie_big_nohaplotig	exon	119260362	119260525	96	+	.	Parent=comp493_c0_seq1.mrna1;Target=comp493_c0_seq1 16 179 -
Chr1	stalkie_big_nohaplotig	CDS	119253788	119253877	.	+	0	Parent=comp493_c0_seq1.mrna1
Chr1	gffcl	locus	119277043	119284395	.	-	.	ID=RLOC_00010557;geneIDs=FBgn0030666.1.path1;transcripts=FBgn0030666.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119277043	119284395	.	-	.	ID=FBgn0030666.1.mrna1;geneID=FBgn0030666.1.path1;Name=FBgn0030666.1;Dir=sensecoverage=100.0;identity=99.4;matches=1387;mismatches=8;indels=0;unknowns=0;locus=RLOC_00010557
Chr1	stalkie_big_nohaplotig	exon	119277043	119278377	99	-	.	Parent=FBgn0030666.1.mrna1;Target=FBgn0030666.1 61 1395 +
Chr1	stalkie_big_nohaplotig	exon	119284336	119284395	98	-	.	Parent=FBgn0030666.1.mrna1;Target=FBgn0030666.1 1 60 +
Chr1	stalkie_big_nohaplotig	CDS	119277043	119278377	.	-	0	Parent=FBgn0030666.1.mrna1;Target=FBgn0030666.1 61 1395 +
Chr1	stalkie_big_nohaplotig	CDS	119284336	119284395	.	-	0	Parent=FBgn0030666.1.mrna1;Target=FBgn0030666.1 1 60 +
Chr1	gffcl	locus	119292735	119293566	.	-	.	ID=RLOC_00010558;geneIDs=comp150115_c0_seq1.path1;transcripts=comp150115_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119292735	119293566	.	-	.	ID=comp150115_c0_seq1.mrna1;geneID=comp150115_c0_seq1.path1;Name=comp150115_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=827;mismatches=3;indels=3;unknowns=0;Target=comp150115_c0_seq1 831 1 .;CDS_Target=comp150115_c0_seq1 38 3 .;locus=RLOC_00010558
Chr1	stalkie_big_nohaplotig	exon	119292735	119293566	99	-	.	Parent=comp150115_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	119293527	119293564	.	-	0	Parent=comp150115_c0_seq1.mrna1
Chr1	gffcl	locus	119294276	119295472	.	-	.	ID=RLOC_00010559;geneIDs=comp161117_c0_seq1.path1;transcripts=comp161117_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119294276	119295472	.	-	.	ID=comp161117_c0_seq1.mrna1;geneID=comp161117_c0_seq1.path1;Name=comp161117_c0_seq1;Dir=indeterminatecoverage=99.3;identity=98.8;matches=1183;mismatches=14;indels=0;unknowns=0;Target=comp161117_c0_seq1 1206 10 .;CDS_Target=comp161117_c0_seq1 715 521 .;locus=RLOC_00010559
Chr1	stalkie_big_nohaplotig	exon	119294276	119295472	98	-	.	Parent=comp161117_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	119294767	119294961	.	-	0	Parent=comp161117_c0_seq1.mrna1
Chr1	gffcl	locus	119296006	119296265	.	+	.	ID=RLOC_00010560;geneIDs=comp161460_c0_seq1.path1;transcripts=comp161460_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119296006	119296265	.	+	.	ID=comp161460_c0_seq1.mrna1;geneID=comp161460_c0_seq1.path1;Name=comp161460_c0_seq1;Dir=indeterminatecoverage=32.6;identity=98.1;matches=255;mismatches=5;indels=0;unknowns=0;Target=comp161460_c0_seq1 260 1 .;locus=RLOC_00010560
Chr1	stalkie_big_nohaplotig	exon	119296006	119296265	98	+	.	Parent=comp161460_c0_seq1.mrna1
Chr1	gffcl	locus	119297642	119340763	.	-	.	ID=RLOC_00010561;geneIDs=FBgn0023531.1.path1;transcripts=FBgn0023531.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119297642	119340763	.	-	.	ID=FBgn0023531.1.mrna1;geneID=FBgn0023531.1.path1;Name=FBgn0023531.1;Dir=sensecoverage=98.9;identity=79.0;matches=2796;mismatches=15;indels=728;unknowns=0;Target=FBgn0023531.1 176 334 +;locus=RLOC_00010561
Chr1	stalkie_big_nohaplotig	exon	119297642	119298640	99	-	.	Parent=FBgn0023531.1.mrna1;Target=FBgn0023531.1 2581 3579 +
Chr1	stalkie_big_nohaplotig	exon	119298717	119298839	99	-	.	Parent=FBgn0023531.1.mrna1;Target=FBgn0023531.1 2458 2580 +
Chr1	stalkie_big_nohaplotig	exon	119308206	119308299	100	-	.	Parent=FBgn0023531.1.mrna1;Target=FBgn0023531.1 2364 2457 +
Chr1	stalkie_big_nohaplotig	exon	119308372	119308554	100	-	.	Parent=FBgn0023531.1.mrna1;Target=FBgn0023531.1 2181 2363 +
Chr1	stalkie_big_nohaplotig	exon	119309826	119310285	98	-	.	Parent=FBgn0023531.1.mrna1;Target=FBgn0023531.1 1721 2180 +
Chr1	stalkie_big_nohaplotig	exon	119310602	119310664	100	-	.	Parent=FBgn0023531.1.mrna1;Target=FBgn0023531.1 1658 1720 +
Chr1	stalkie_big_nohaplotig	exon	119310928	119311011	100	-	.	Parent=FBgn0023531.1.mrna1;Target=FBgn0023531.1 1574 1657 +
Chr1	stalkie_big_nohaplotig	exon	119311719	119311790	98	-	.	Parent=FBgn0023531.1.mrna1;Target=FBgn0023531.1 1502 1573 +
Chr1	stalkie_big_nohaplotig	exon	119316047	119316210	100	-	.	Parent=FBgn0023531.1.mrna1;Target=FBgn0023531.1 1338 1501 +
Chr1	stalkie_big_nohaplotig	exon	119321851	119321946	100	-	.	Parent=FBgn0023531.1.mrna1;Target=FBgn0023531.1 1242 1337 +
Chr1	stalkie_big_nohaplotig	exon	119322017	119322131	100	-	.	Parent=FBgn0023531.1.mrna1;Target=FBgn0023531.1 1127 1241 +
Chr1	stalkie_big_nohaplotig	exon	119322397	119322489	100	-	.	Parent=FBgn0023531.1.mrna1;Target=FBgn0023531.1 1034 1126 +
Chr1	stalkie_big_nohaplotig	exon	119324275	119324359	98	-	.	Parent=FBgn0023531.1.mrna1;Target=FBgn0023531.1 949 1033 +
Chr1	stalkie_big_nohaplotig	exon	119336986	119336995	70	-	.	Parent=FBgn0023531.1.mrna1;Target=FBgn0023531.1 939 948 +
Chr1	stalkie_big_nohaplotig	exon	119338933	119338937	100	-	.	Parent=FBgn0023531.1.mrna1;Target=FBgn0023531.1 934 938 +
Chr1	stalkie_big_nohaplotig	exon	119340516	119340560	5	-	.	Parent=FBgn0023531.1.mrna1;Target=FBgn0023531.1 161 933 +
Chr1	stalkie_big_nohaplotig	exon	119340644	119340763	100	-	.	Parent=FBgn0023531.1.mrna1;Target=FBgn0023531.1 41 160 +
Chr1	stalkie_big_nohaplotig	CDS	119340517	119340545	.	-	0	Parent=FBgn0023531.1.mrna1
Chr1	gffcl	locus	119334079	119334664	.	+	.	ID=RLOC_00010562;geneIDs=FBgn0024897.1.path1;transcripts=FBgn0024897.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119334079	119334664	.	+	.	ID=FBgn0024897.1.mrna1;geneID=FBgn0024897.1.path1;Name=FBgn0024897.1;Dir=sensecoverage=30.3;identity=99.6;matches=507;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010562
Chr1	stalkie_big_nohaplotig	exon	119334079	119334435	99	+	.	Parent=FBgn0024897.1.mrna1;Target=FBgn0024897.1 1 357 +
Chr1	stalkie_big_nohaplotig	exon	119334513	119334664	99	+	.	Parent=FBgn0024897.1.mrna1;Target=FBgn0024897.1 358 509 +
Chr1	stalkie_big_nohaplotig	CDS	119334079	119334435	.	+	0	Parent=FBgn0024897.1.mrna1;Target=FBgn0024897.1 1 357 +
Chr1	stalkie_big_nohaplotig	CDS	119334513	119334662	.	+	0	Parent=FBgn0024897.1.mrna1;Target=FBgn0024897.1 358 507 +
Chr1	gffcl	locus	119350604	119352186	.	.	.	ID=RLOC_00010563;geneIDs=AAEL017220.1.path1,comp119249_c0_seq1.path1;transcripts=AAEL017220.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119350815	119352186	.	-	.	ID=AAEL017220.1.mrna1;geneID=AAEL017220.1.path1;Name=AAEL017220.1;Dir=sensecoverage=99.8;identity=98.2;matches=1223;mismatches=23;indels=0;unknowns=0;locus=RLOC_00010563
Chr1	stalkie_big_nohaplotig	exon	119350815	119351393	97	-	.	Parent=AAEL017220.1.mrna1;Target=AAEL017220.1 668 1246 +
Chr1	stalkie_big_nohaplotig	exon	119351457	119351812	99	-	.	Parent=AAEL017220.1.mrna1;Target=AAEL017220.1 312 667 +
Chr1	stalkie_big_nohaplotig	exon	119351876	119352186	99	-	.	Parent=AAEL017220.1.mrna1;Target=AAEL017220.1 1 311 +
Chr1	stalkie_big_nohaplotig	CDS	119350816	119351393	.	-	2	Parent=AAEL017220.1.mrna1;Target=AAEL017220.1 668 1245 +
Chr1	stalkie_big_nohaplotig	CDS	119351457	119351812	.	-	1	Parent=AAEL017220.1.mrna1;Target=AAEL017220.1 312 667 +
Chr1	stalkie_big_nohaplotig	CDS	119351876	119352186	.	-	0	Parent=AAEL017220.1.mrna1;Target=AAEL017220.1 1 311 +
Chr1	gffcl	locus	119354943	119357533	.	+	.	ID=RLOC_00010564;geneIDs=FBgn0024365.1.path1;transcripts=FBgn0024365.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119354943	119357533	.	+	.	ID=FBgn0024365.1.mrna1;geneID=FBgn0024365.1.path1;Name=FBgn0024365.1;Dir=sensecoverage=100.0;identity=99.8;matches=2152;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010564
Chr1	stalkie_big_nohaplotig	exon	119354943	119355190	100	+	.	Parent=FBgn0024365.1.mrna1;Target=FBgn0024365.1 1 248 +
Chr1	stalkie_big_nohaplotig	exon	119355265	119355812	99	+	.	Parent=FBgn0024365.1.mrna1;Target=FBgn0024365.1 249 796 +
Chr1	stalkie_big_nohaplotig	exon	119355877	119356078	99	+	.	Parent=FBgn0024365.1.mrna1;Target=FBgn0024365.1 797 998 +
Chr1	stalkie_big_nohaplotig	exon	119356143	119356377	100	+	.	Parent=FBgn0024365.1.mrna1;Target=FBgn0024365.1 999 1233 +
Chr1	stalkie_big_nohaplotig	exon	119356437	119357024	99	+	.	Parent=FBgn0024365.1.mrna1;Target=FBgn0024365.1 1234 1821 +
Chr1	stalkie_big_nohaplotig	exon	119357136	119357314	99	+	.	Parent=FBgn0024365.1.mrna1;Target=FBgn0024365.1 1822 2000 +
Chr1	stalkie_big_nohaplotig	exon	119357377	119357533	99	+	.	Parent=FBgn0024365.1.mrna1;Target=FBgn0024365.1 2001 2157 +
Chr1	stalkie_big_nohaplotig	CDS	119354943	119355190	.	+	0	Parent=FBgn0024365.1.mrna1;Target=FBgn0024365.1 1 248 +
Chr1	stalkie_big_nohaplotig	CDS	119355265	119355812	.	+	1	Parent=FBgn0024365.1.mrna1;Target=FBgn0024365.1 249 796 +
Chr1	stalkie_big_nohaplotig	CDS	119355877	119356078	.	+	2	Parent=FBgn0024365.1.mrna1;Target=FBgn0024365.1 797 998 +
Chr1	stalkie_big_nohaplotig	CDS	119356143	119356377	.	+	1	Parent=FBgn0024365.1.mrna1;Target=FBgn0024365.1 999 1233 +
Chr1	stalkie_big_nohaplotig	CDS	119356437	119357024	.	+	0	Parent=FBgn0024365.1.mrna1;Target=FBgn0024365.1 1234 1821 +
Chr1	stalkie_big_nohaplotig	CDS	119357136	119357314	.	+	0	Parent=FBgn0024365.1.mrna1;Target=FBgn0024365.1 1822 2000 +
Chr1	stalkie_big_nohaplotig	CDS	119357377	119357533	.	+	1	Parent=FBgn0024365.1.mrna1;Target=FBgn0024365.1 2001 2157 +
Chr1	gffcl	locus	119361043	119364790	.	-	.	ID=RLOC_00010565;geneIDs=FBgn0003210.1.path1;transcripts=FBgn0003210.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119361043	119364790	.	-	.	ID=FBgn0003210.1.mrna1;geneID=FBgn0003210.1.path1;Name=FBgn0003210.1;Dir=sensecoverage=100.0;identity=99.5;matches=3483;mismatches=18;indels=0;unknowns=0;locus=RLOC_00010565
Chr1	stalkie_big_nohaplotig	exon	119361043	119361830	98	-	.	Parent=FBgn0003210.1.mrna1;Target=FBgn0003210.1 2714 3501 +
Chr1	stalkie_big_nohaplotig	exon	119361887	119362868	99	-	.	Parent=FBgn0003210.1.mrna1;Target=FBgn0003210.1 1732 2713 +
Chr1	stalkie_big_nohaplotig	exon	119362926	119363146	99	-	.	Parent=FBgn0003210.1.mrna1;Target=FBgn0003210.1 1511 1731 +
Chr1	stalkie_big_nohaplotig	exon	119363215	119364001	100	-	.	Parent=FBgn0003210.1.mrna1;Target=FBgn0003210.1 724 1510 +
Chr1	stalkie_big_nohaplotig	exon	119364068	119364790	99	-	.	Parent=FBgn0003210.1.mrna1;Target=FBgn0003210.1 1 723 +
Chr1	stalkie_big_nohaplotig	CDS	119361043	119361830	.	-	2	Parent=FBgn0003210.1.mrna1;Target=FBgn0003210.1 2714 3501 +
Chr1	stalkie_big_nohaplotig	CDS	119361887	119362868	.	-	0	Parent=FBgn0003210.1.mrna1;Target=FBgn0003210.1 1732 2713 +
Chr1	stalkie_big_nohaplotig	CDS	119362926	119363146	.	-	2	Parent=FBgn0003210.1.mrna1;Target=FBgn0003210.1 1511 1731 +
Chr1	stalkie_big_nohaplotig	CDS	119363215	119364001	.	-	0	Parent=FBgn0003210.1.mrna1;Target=FBgn0003210.1 724 1510 +
Chr1	stalkie_big_nohaplotig	CDS	119364068	119364790	.	-	0	Parent=FBgn0003210.1.mrna1;Target=FBgn0003210.1 1 723 +
Chr1	gffcl	locus	119371574	119372607	.	-	.	ID=RLOC_00010566;geneIDs=ORF2491.path1;transcripts=ORF2491.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119371574	119372607	.	-	.	ID=ORF2491.mrna1;geneID=ORF2491.path1;Name=ORF2491;Dir=sensecoverage=100.0;identity=99.4;matches=847;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010566
Chr1	stalkie_big_nohaplotig	exon	119371574	119372079	99	-	.	Parent=ORF2491.mrna1;Target=ORF2491 347 852 +
Chr1	stalkie_big_nohaplotig	exon	119372138	119372321	100	-	.	Parent=ORF2491.mrna1;Target=ORF2491 163 346 +
Chr1	stalkie_big_nohaplotig	exon	119372390	119372515	99	-	.	Parent=ORF2491.mrna1;Target=ORF2491 37 162 +
Chr1	stalkie_big_nohaplotig	exon	119372572	119372607	100	-	.	Parent=ORF2491.mrna1;Target=ORF2491 1 36 +
Chr1	stalkie_big_nohaplotig	CDS	119371574	119372079	.	-	2	Parent=ORF2491.mrna1;Target=ORF2491 347 852 +
Chr1	stalkie_big_nohaplotig	CDS	119372138	119372321	.	-	0	Parent=ORF2491.mrna1;Target=ORF2491 163 346 +
Chr1	stalkie_big_nohaplotig	CDS	119372390	119372515	.	-	0	Parent=ORF2491.mrna1;Target=ORF2491 37 162 +
Chr1	stalkie_big_nohaplotig	CDS	119372572	119372607	.	-	0	Parent=ORF2491.mrna1;Target=ORF2491 1 36 +
Chr1	gffcl	locus	119376909	119377558	.	+	.	ID=RLOC_00010567;geneIDs=FBgn0029873.1.path1;transcripts=FBgn0029873.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119376909	119377558	.	+	.	ID=FBgn0029873.1.mrna1;geneID=FBgn0029873.1.path1;Name=FBgn0029873.1;Dir=sensecoverage=100.0;identity=99.7;matches=592;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010567
Chr1	stalkie_big_nohaplotig	exon	119376909	119377022	100	+	.	Parent=FBgn0029873.1.mrna1;Target=FBgn0029873.1 1 114 +
Chr1	stalkie_big_nohaplotig	exon	119377079	119377558	99	+	.	Parent=FBgn0029873.1.mrna1;Target=FBgn0029873.1 115 594 +
Chr1	stalkie_big_nohaplotig	CDS	119376909	119377022	.	+	0	Parent=FBgn0029873.1.mrna1;Target=FBgn0029873.1 1 114 +
Chr1	stalkie_big_nohaplotig	CDS	119377079	119377558	.	+	0	Parent=FBgn0029873.1.mrna1;Target=FBgn0029873.1 115 594 +
Chr1	gffcl	locus	119379178	119380874	.	-	.	ID=RLOC_00010568;geneIDs=AAEL004473.1.path1;transcripts=AAEL004473.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119379178	119380874	.	-	.	ID=AAEL004473.1.mrna1;geneID=AAEL004473.1.path1;Name=AAEL004473.1;Dir=sensecoverage=100.0;identity=98.4;matches=1618;mismatches=23;indels=3;unknowns=0;locus=RLOC_00010568
Chr1	stalkie_big_nohaplotig	exon	119379178	119380747	98	-	.	Parent=AAEL004473.1.mrna1;Target=AAEL004473.1 72 1644 +
Chr1	stalkie_big_nohaplotig	exon	119380804	119380874	92	-	.	Parent=AAEL004473.1.mrna1;Target=AAEL004473.1 1 71 +
Chr1	stalkie_big_nohaplotig	CDS	119379178	119380747	.	-	1	Parent=AAEL004473.1.mrna1;Target=AAEL004473.1 72 1644 +
Chr1	stalkie_big_nohaplotig	CDS	119380804	119380874	.	-	0	Parent=AAEL004473.1.mrna1;Target=AAEL004473.1 1 71 +
Chr1	gffcl	locus	119386227	119386958	.	-	.	ID=RLOC_00010569;geneIDs=comp146640_c0_seq1.path1;transcripts=comp146640_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119386227	119386958	.	-	.	ID=comp146640_c0_seq1.mrna1;geneID=comp146640_c0_seq1.path1;Name=comp146640_c0_seq1;Dir=sensecoverage=100.0;identity=94.8;matches=638;mismatches=14;indels=21;unknowns=0;Target=comp146640_c0_seq1 3 5 +;locus=RLOC_00010569
Chr1	stalkie_big_nohaplotig	exon	119386227	119386420	98	-	.	Parent=comp146640_c0_seq1.mrna1;Target=comp146640_c0_seq1 459 652 +
Chr1	stalkie_big_nohaplotig	exon	119386480	119386958	93	-	.	Parent=comp146640_c0_seq1.mrna1;Target=comp146640_c0_seq1 1 458 +
Chr1	stalkie_big_nohaplotig	CDS	119386954	119386956	.	-	0	Parent=comp146640_c0_seq1.mrna1
Chr1	gffcl	locus	119405931	119406379	.	+	.	ID=RLOC_00010570;geneIDs=comp139294_c0_seq1.path1;transcripts=comp139294_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119405931	119406379	.	+	.	ID=comp139294_c0_seq1.mrna1;geneID=comp139294_c0_seq1.path1;Name=comp139294_c0_seq1;Dir=indeterminatecoverage=96.5;identity=92.3;matches=420;mismatches=20;indels=15;unknowns=0;Target=comp139294_c0_seq1 446 1 .;CDS_Target=comp139294_c0_seq1 337 227 .;locus=RLOC_00010570
Chr1	stalkie_big_nohaplotig	exon	119405931	119406379	92	+	.	Parent=comp139294_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	119406157	119406267	.	+	0	Parent=comp139294_c0_seq1.mrna1
Chr1	gffcl	locus	119409463	119504199	.	-	.	ID=RLOC_00010571;geneIDs=FBgn0026207.1.path1;transcripts=FBgn0026207.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119409463	119504199	.	-	.	ID=FBgn0026207.1.mrna1;geneID=FBgn0026207.1.path1;Name=FBgn0026207.1;Dir=sensecoverage=100.0;identity=99.3;matches=2210;mismatches=16;indels=0;unknowns=0;locus=RLOC_00010571
Chr1	stalkie_big_nohaplotig	exon	119409463	119409559	100	-	.	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 2130 2226 +
Chr1	stalkie_big_nohaplotig	exon	119414617	119414708	100	-	.	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 2038 2129 +
Chr1	stalkie_big_nohaplotig	exon	119414776	119414935	98	-	.	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 1878 2037 +
Chr1	stalkie_big_nohaplotig	exon	119414996	119415165	100	-	.	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 1708 1877 +
Chr1	stalkie_big_nohaplotig	exon	119416386	119416822	99	-	.	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 1271 1707 +
Chr1	stalkie_big_nohaplotig	exon	119416884	119416987	100	-	.	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 1167 1270 +
Chr1	stalkie_big_nohaplotig	exon	119417070	119417215	97	-	.	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 1021 1166 +
Chr1	stalkie_big_nohaplotig	exon	119417283	119417451	99	-	.	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 852 1020 +
Chr1	stalkie_big_nohaplotig	exon	119417519	119417595	97	-	.	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 775 851 +
Chr1	stalkie_big_nohaplotig	exon	119419714	119419981	100	-	.	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 507 774 +
Chr1	stalkie_big_nohaplotig	exon	119420146	119420271	97	-	.	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 381 506 +
Chr1	stalkie_big_nohaplotig	exon	119473793	119473962	99	-	.	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 211 380 +
Chr1	stalkie_big_nohaplotig	exon	119503990	119504199	99	-	.	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 1 210 +
Chr1	stalkie_big_nohaplotig	CDS	119409463	119409559	.	-	1	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 2130 2226 +
Chr1	stalkie_big_nohaplotig	CDS	119414617	119414708	.	-	0	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 2038 2129 +
Chr1	stalkie_big_nohaplotig	CDS	119414776	119414935	.	-	1	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 1878 2037 +
Chr1	stalkie_big_nohaplotig	CDS	119414996	119415165	.	-	0	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 1708 1877 +
Chr1	stalkie_big_nohaplotig	CDS	119416386	119416822	.	-	2	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 1271 1707 +
Chr1	stalkie_big_nohaplotig	CDS	119416884	119416987	.	-	1	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 1167 1270 +
Chr1	stalkie_big_nohaplotig	CDS	119417070	119417215	.	-	0	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 1021 1166 +
Chr1	stalkie_big_nohaplotig	CDS	119417283	119417451	.	-	1	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 852 1020 +
Chr1	stalkie_big_nohaplotig	CDS	119417519	119417595	.	-	0	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 775 851 +
Chr1	stalkie_big_nohaplotig	CDS	119419714	119419981	.	-	1	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 507 774 +
Chr1	stalkie_big_nohaplotig	CDS	119420146	119420271	.	-	1	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 381 506 +
Chr1	stalkie_big_nohaplotig	CDS	119473793	119473962	.	-	0	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 211 380 +
Chr1	stalkie_big_nohaplotig	CDS	119503990	119504199	.	-	0	Parent=FBgn0026207.1.mrna1;Target=FBgn0026207.1 1 210 +
Chr1	gffcl	locus	119409718	119409987	.	+	.	ID=RLOC_00010572;geneIDs=comp97474_c0_seq1.path1;transcripts=comp97474_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119409718	119409987	.	+	.	ID=comp97474_c0_seq1.mrna1;geneID=comp97474_c0_seq1.path1;Name=comp97474_c0_seq1;Dir=indeterminatecoverage=99.3;identity=93.6;matches=264;mismatches=6;indels=12;unknowns=0;Target=comp97474_c0_seq1 282 1 .;CDS_Target=comp97474_c0_seq1 166 110 .;locus=RLOC_00010572
Chr1	stalkie_big_nohaplotig	exon	119409718	119409987	93	+	.	Parent=comp97474_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	119409827	119409878	.	+	0	Parent=comp97474_c0_seq1.mrna1
Chr1	gffcl	locus	119506489	119507430	.	-	.	ID=RLOC_00010573;geneIDs=comp155620_c0_seq1.path1;transcripts=comp155620_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119506489	119507430	.	-	.	ID=comp155620_c0_seq1.mrna1;geneID=comp155620_c0_seq1.path1;Name=comp155620_c0_seq1;Dir=antisensecoverage=98.5;identity=99.7;matches=864;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010573
Chr1	stalkie_big_nohaplotig	exon	119506489	119506811	99	-	.	Parent=comp155620_c0_seq1.mrna1;Target=comp155620_c0_seq1 14 336 -
Chr1	stalkie_big_nohaplotig	exon	119506887	119507430	99	-	.	Parent=comp155620_c0_seq1.mrna1;Target=comp155620_c0_seq1 337 880 -
Chr1	stalkie_big_nohaplotig	CDS	119506614	119506811	.	-	0	Parent=comp155620_c0_seq1.mrna1;Target=comp155620_c0_seq1 139 336 .
Chr1	stalkie_big_nohaplotig	CDS	119506887	119506949	.	-	0	Parent=comp155620_c0_seq1.mrna1;Target=comp155620_c0_seq1 337 399 .
Chr1	gffcl	locus	119609720	119610661	.	+	.	ID=RLOC_00010574;geneIDs=comp155620_c0_seq1.path2;transcripts=comp155620_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	119609720	119610661	.	+	.	ID=comp155620_c0_seq1.mrna2;geneID=comp155620_c0_seq1.path2;Name=comp155620_c0_seq1;Dir=antisensecoverage=98.5;identity=99.2;matches=860;mismatches=7;indels=0;unknowns=0;locus=RLOC_00010574
Chr1	stalkie_big_nohaplotig	exon	119609720	119610263	99	+	.	Parent=comp155620_c0_seq1.mrna2;Target=comp155620_c0_seq1 337 880 -
Chr1	stalkie_big_nohaplotig	exon	119610339	119610661	99	+	.	Parent=comp155620_c0_seq1.mrna2;Target=comp155620_c0_seq1 14 336 -
Chr1	stalkie_big_nohaplotig	CDS	119610201	119610263	.	+	0	Parent=comp155620_c0_seq1.mrna2;Target=comp155620_c0_seq1 337 399 .
Chr1	stalkie_big_nohaplotig	CDS	119610339	119610536	.	+	0	Parent=comp155620_c0_seq1.mrna2;Target=comp155620_c0_seq1 139 336 .
Chr1	gffcl	locus	119622209	119637846	.	-	.	ID=RLOC_00010575;geneIDs=FBgn0029950.1.path1;transcripts=FBgn0029950.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119622209	119637846	.	-	.	ID=FBgn0029950.1.mrna1;geneID=FBgn0029950.1.path1;Name=FBgn0029950.1;Dir=sensecoverage=100.0;identity=99.7;matches=1831;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010575
Chr1	stalkie_big_nohaplotig	exon	119622209	119622464	100	-	.	Parent=FBgn0029950.1.mrna1;Target=FBgn0029950.1 1581 1836 +
Chr1	stalkie_big_nohaplotig	exon	119622530	119622729	99	-	.	Parent=FBgn0029950.1.mrna1;Target=FBgn0029950.1 1381 1580 +
Chr1	stalkie_big_nohaplotig	exon	119622792	119623172	99	-	.	Parent=FBgn0029950.1.mrna1;Target=FBgn0029950.1 1000 1380 +
Chr1	stalkie_big_nohaplotig	exon	119625067	119625316	99	-	.	Parent=FBgn0029950.1.mrna1;Target=FBgn0029950.1 750 999 +
Chr1	stalkie_big_nohaplotig	exon	119625387	119625541	99	-	.	Parent=FBgn0029950.1.mrna1;Target=FBgn0029950.1 595 749 +
Chr1	stalkie_big_nohaplotig	exon	119625611	119625730	99	-	.	Parent=FBgn0029950.1.mrna1;Target=FBgn0029950.1 475 594 +
Chr1	stalkie_big_nohaplotig	exon	119625857	119626082	100	-	.	Parent=FBgn0029950.1.mrna1;Target=FBgn0029950.1 249 474 +
Chr1	stalkie_big_nohaplotig	exon	119637599	119637846	100	-	.	Parent=FBgn0029950.1.mrna1;Target=FBgn0029950.1 1 248 +
Chr1	stalkie_big_nohaplotig	CDS	119622209	119622464	.	-	1	Parent=FBgn0029950.1.mrna1;Target=FBgn0029950.1 1581 1836 +
Chr1	stalkie_big_nohaplotig	CDS	119622530	119622729	.	-	0	Parent=FBgn0029950.1.mrna1;Target=FBgn0029950.1 1381 1580 +
Chr1	stalkie_big_nohaplotig	CDS	119622792	119623172	.	-	0	Parent=FBgn0029950.1.mrna1;Target=FBgn0029950.1 1000 1380 +
Chr1	stalkie_big_nohaplotig	CDS	119625067	119625316	.	-	1	Parent=FBgn0029950.1.mrna1;Target=FBgn0029950.1 750 999 +
Chr1	stalkie_big_nohaplotig	CDS	119625387	119625541	.	-	0	Parent=FBgn0029950.1.mrna1;Target=FBgn0029950.1 595 749 +
Chr1	stalkie_big_nohaplotig	CDS	119625611	119625730	.	-	0	Parent=FBgn0029950.1.mrna1;Target=FBgn0029950.1 475 594 +
Chr1	stalkie_big_nohaplotig	CDS	119625857	119626082	.	-	1	Parent=FBgn0029950.1.mrna1;Target=FBgn0029950.1 249 474 +
Chr1	stalkie_big_nohaplotig	CDS	119637599	119637846	.	-	0	Parent=FBgn0029950.1.mrna1;Target=FBgn0029950.1 1 248 +
Chr1	gffcl	locus	119652378	119653947	.	+	.	ID=RLOC_00010576;geneIDs=comp151049_c0_seq1.path1;transcripts=comp151049_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119652378	119653947	.	+	.	ID=comp151049_c0_seq1.mrna1;geneID=comp151049_c0_seq1.path1;Name=comp151049_c0_seq1;Dir=antisensecoverage=100.0;identity=98.3;matches=762;mismatches=13;indels=0;unknowns=0;locus=RLOC_00010576
Chr1	stalkie_big_nohaplotig	exon	119652378	119652479	100	+	.	Parent=comp151049_c0_seq1.mrna1;Target=comp151049_c0_seq1 674 775 -
Chr1	stalkie_big_nohaplotig	exon	119652728	119652748	100	+	.	Parent=comp151049_c0_seq1.mrna1;Target=comp151049_c0_seq1 653 673 -
Chr1	stalkie_big_nohaplotig	exon	119652870	119652890	100	+	.	Parent=comp151049_c0_seq1.mrna1;Target=comp151049_c0_seq1 632 652 -
Chr1	stalkie_big_nohaplotig	exon	119652950	119653002	100	+	.	Parent=comp151049_c0_seq1.mrna1;Target=comp151049_c0_seq1 579 631 -
Chr1	stalkie_big_nohaplotig	exon	119653081	119653154	100	+	.	Parent=comp151049_c0_seq1.mrna1;Target=comp151049_c0_seq1 505 578 -
Chr1	stalkie_big_nohaplotig	exon	119653272	119653306	100	+	.	Parent=comp151049_c0_seq1.mrna1;Target=comp151049_c0_seq1 470 504 -
Chr1	stalkie_big_nohaplotig	exon	119653366	119653483	100	+	.	Parent=comp151049_c0_seq1.mrna1;Target=comp151049_c0_seq1 352 469 -
Chr1	stalkie_big_nohaplotig	exon	119653545	119653829	96	+	.	Parent=comp151049_c0_seq1.mrna1;Target=comp151049_c0_seq1 67 351 -
Chr1	stalkie_big_nohaplotig	exon	119653882	119653947	96	+	.	Parent=comp151049_c0_seq1.mrna1;Target=comp151049_c0_seq1 1 66 -
Chr1	stalkie_big_nohaplotig	CDS	119652414	119652479	.	+	0	Parent=comp151049_c0_seq1.mrna1;Target=comp151049_c0_seq1 674 739 .
Chr1	stalkie_big_nohaplotig	CDS	119652728	119652748	.	+	0	Parent=comp151049_c0_seq1.mrna1;Target=comp151049_c0_seq1 653 673 .
Chr1	stalkie_big_nohaplotig	CDS	119652870	119652890	.	+	0	Parent=comp151049_c0_seq1.mrna1;Target=comp151049_c0_seq1 632 652 .
Chr1	stalkie_big_nohaplotig	CDS	119652950	119653002	.	+	0	Parent=comp151049_c0_seq1.mrna1;Target=comp151049_c0_seq1 579 631 .
Chr1	stalkie_big_nohaplotig	CDS	119653081	119653154	.	+	1	Parent=comp151049_c0_seq1.mrna1;Target=comp151049_c0_seq1 505 578 .
Chr1	stalkie_big_nohaplotig	CDS	119653272	119653306	.	+	2	Parent=comp151049_c0_seq1.mrna1;Target=comp151049_c0_seq1 470 504 .
Chr1	stalkie_big_nohaplotig	CDS	119653366	119653483	.	+	0	Parent=comp151049_c0_seq1.mrna1;Target=comp151049_c0_seq1 352 469 .
Chr1	stalkie_big_nohaplotig	CDS	119653545	119653570	.	+	2	Parent=comp151049_c0_seq1.mrna1;Target=comp151049_c0_seq1 326 351 .
Chr1	gffcl	locus	119656718	119657213	.	-	.	ID=RLOC_00010577;geneIDs=comp153844_c0_seq1.path1;transcripts=comp153844_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119656718	119657213	.	-	.	ID=comp153844_c0_seq1.mrna1;geneID=comp153844_c0_seq1.path1;Name=comp153844_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=431;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010577
Chr1	stalkie_big_nohaplotig	exon	119656718	119657077	99	-	.	Parent=comp153844_c0_seq1.mrna1;Target=comp153844_c0_seq1 1 360 -
Chr1	stalkie_big_nohaplotig	exon	119657142	119657213	100	-	.	Parent=comp153844_c0_seq1.mrna1;Target=comp153844_c0_seq1 361 432 -
Chr1	stalkie_big_nohaplotig	CDS	119656829	119657077	.	-	0	Parent=comp153844_c0_seq1.mrna1;Target=comp153844_c0_seq1 112 360 .
Chr1	stalkie_big_nohaplotig	CDS	119657142	119657213	.	-	0	Parent=comp153844_c0_seq1.mrna1;Target=comp153844_c0_seq1 361 432 .
Chr1	gffcl	locus	119718524	119719246	.	-	.	ID=RLOC_00010578;geneIDs=comp150956_c0_seq1.path1;transcripts=comp150956_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119718524	119719246	.	-	.	ID=comp150956_c0_seq1.mrna1;geneID=comp150956_c0_seq1.path1;Name=comp150956_c0_seq1;Dir=sensecoverage=95.8;identity=99.3;matches=586;mismatches=3;indels=1;unknowns=0;locus=RLOC_00010578
Chr1	stalkie_big_nohaplotig	exon	119718524	119718709	99	-	.	Parent=comp150956_c0_seq1.mrna1;Target=comp150956_c0_seq1 422 608 +
Chr1	stalkie_big_nohaplotig	exon	119718784	119718877	100	-	.	Parent=comp150956_c0_seq1.mrna1;Target=comp150956_c0_seq1 328 421 +
Chr1	stalkie_big_nohaplotig	exon	119718938	119719246	99	-	.	Parent=comp150956_c0_seq1.mrna1;Target=comp150956_c0_seq1 19 327 +
Chr1	stalkie_big_nohaplotig	CDS	119718645	119718709	.	-	2	Parent=comp150956_c0_seq1.mrna1;Target=comp150956_c0_seq1 422 486 +
Chr1	stalkie_big_nohaplotig	CDS	119718784	119718877	.	-	0	Parent=comp150956_c0_seq1.mrna1;Target=comp150956_c0_seq1 328 421 +
Chr1	stalkie_big_nohaplotig	CDS	119718938	119718994	.	-	0	Parent=comp150956_c0_seq1.mrna1;Target=comp150956_c0_seq1 271 327 +
Chr1	gffcl	locus	119736371	121673075	.	+	.	ID=RLOC_00010579;geneIDs=FBgn0000108.1.path1,comp159651_c1_seq1.path1;transcripts=comp159651_c1_seq1.mrna1,FBgn0000108.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	119736371	121673075	.	+	.	ID=comp159651_c1_seq1.mrna1;geneID=comp159651_c1_seq1.path1;Name=comp159651_c1_seq1;Dir=antisensecoverage=91.0;identity=98.9;matches=2726;mismatches=8;indels=21;unknowns=0;locus=RLOC_00010579
Chr1	stalkie_big_nohaplotig	exon	119736371	119736372	100	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 2817 2818 -
Chr1	stalkie_big_nohaplotig	exon	119751240	119751243	100	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 2813 2816 -
Chr1	stalkie_big_nohaplotig	exon	119759151	119759153	100	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 2810 2812 -
Chr1	stalkie_big_nohaplotig	exon	119783079	119783087	100	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 2801 2809 -
Chr1	stalkie_big_nohaplotig	exon	119797967	119797968	100	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 2799 2800 -
Chr1	stalkie_big_nohaplotig	exon	119804199	119804200	100	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 2797 2798 -
Chr1	stalkie_big_nohaplotig	exon	119807563	119807564	100	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 2795 2796 -
Chr1	stalkie_big_nohaplotig	exon	119809733	119809740	100	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 2787 2794 -
Chr1	stalkie_big_nohaplotig	exon	119826852	119826857	100	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 2781 2786 -
Chr1	stalkie_big_nohaplotig	exon	119835003	119835004	100	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 2779 2780 -
Chr1	stalkie_big_nohaplotig	exon	119840942	119840953	100	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 2739 2750 -
Chr1	stalkie_big_nohaplotig	exon	119845560	119845574	40	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 2704 2738 -
Chr1	stalkie_big_nohaplotig	exon	119854809	119854819	72	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 2693 2703 -
Chr1	stalkie_big_nohaplotig	exon	121630038	121630211	100	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 2482 2655 -
Chr1	stalkie_big_nohaplotig	exon	121655790	121655928	99	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 2343 2481 -
Chr1	stalkie_big_nohaplotig	exon	121656214	121656435	99	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 2121 2342 -
Chr1	stalkie_big_nohaplotig	exon	121664900	121665052	100	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 1968 2120 -
Chr1	stalkie_big_nohaplotig	exon	121665212	121665582	99	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 1597 1967 -
Chr1	stalkie_big_nohaplotig	exon	121665638	121665790	100	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 1444 1596 -
Chr1	stalkie_big_nohaplotig	exon	121669649	121669798	100	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 1294 1443 -
Chr1	stalkie_big_nohaplotig	exon	121669873	121670504	100	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 662 1293 -
Chr1	stalkie_big_nohaplotig	exon	121670602	121670746	100	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 517 661 -
Chr1	stalkie_big_nohaplotig	exon	121670807	121670986	100	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 337 516 -
Chr1	stalkie_big_nohaplotig	exon	121672741	121673075	99	+	.	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 1 336 -
Chr1	stalkie_big_nohaplotig	CDS	121630185	121630211	.	+	0	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 2482 2508 .
Chr1	stalkie_big_nohaplotig	CDS	121655790	121655928	.	+	0	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 2343 2481 .
Chr1	stalkie_big_nohaplotig	CDS	121656214	121656435	.	+	2	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 2121 2342 .
Chr1	stalkie_big_nohaplotig	CDS	121664900	121665052	.	+	2	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 1968 2120 .
Chr1	stalkie_big_nohaplotig	CDS	121665212	121665582	.	+	2	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 1597 1967 .
Chr1	stalkie_big_nohaplotig	CDS	121665638	121665790	.	+	0	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 1444 1596 .
Chr1	stalkie_big_nohaplotig	CDS	121669649	121669798	.	+	0	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 1294 1443 .
Chr1	stalkie_big_nohaplotig	CDS	121669873	121670504	.	+	0	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 662 1293 .
Chr1	stalkie_big_nohaplotig	CDS	121670602	121670746	.	+	1	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 517 661 .
Chr1	stalkie_big_nohaplotig	CDS	121670807	121670986	.	+	0	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 337 516 .
Chr1	stalkie_big_nohaplotig	CDS	121672741	121672835	.	+	0	Parent=comp159651_c1_seq1.mrna1;Target=comp159651_c1_seq1 241 336 .
Chr1	stalkie_big_nohaplotig	mRNA	121593710	121672832	.	+	.	ID=FBgn0000108.1.mrna1;geneID=FBgn0000108.1.path1;Name=FBgn0000108.1;Dir=sensecoverage=97.9;identity=99.8;matches=2411;mismatches=4;indels=1;unknowns=0;locus=RLOC_00010579
Chr1	stalkie_big_nohaplotig	exon	121593710	121593717	100	+	.	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 54 61 +
Chr1	stalkie_big_nohaplotig	exon	121613839	121613842	100	+	.	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 75 78 +
Chr1	stalkie_big_nohaplotig	exon	121619049	121619051	100	+	.	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 79 81 +
Chr1	stalkie_big_nohaplotig	exon	121630038	121630211	100	+	.	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 82 255 +
Chr1	stalkie_big_nohaplotig	exon	121655790	121655928	99	+	.	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 256 394 +
Chr1	stalkie_big_nohaplotig	exon	121656214	121656435	99	+	.	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 395 616 +
Chr1	stalkie_big_nohaplotig	exon	121664900	121665052	100	+	.	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 617 769 +
Chr1	stalkie_big_nohaplotig	exon	121665212	121665582	99	+	.	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 770 1140 +
Chr1	stalkie_big_nohaplotig	exon	121665638	121665790	100	+	.	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 1141 1293 +
Chr1	stalkie_big_nohaplotig	exon	121669661	121669798	100	+	.	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 1294 1431 +
Chr1	stalkie_big_nohaplotig	exon	121669873	121670504	100	+	.	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 1432 2063 +
Chr1	stalkie_big_nohaplotig	exon	121670602	121670746	100	+	.	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 2064 2208 +
Chr1	stalkie_big_nohaplotig	exon	121670807	121670986	100	+	.	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 2209 2388 +
Chr1	stalkie_big_nohaplotig	exon	121672741	121672832	98	+	.	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 2389 2481 +
Chr1	stalkie_big_nohaplotig	CDS	121593711	121593717	.	+	0	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 55 61 +
Chr1	stalkie_big_nohaplotig	CDS	121613839	121613842	.	+	2	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 75 78 +
Chr1	stalkie_big_nohaplotig	CDS	121619049	121619051	.	+	1	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 79 81 +
Chr1	stalkie_big_nohaplotig	CDS	121630038	121630211	.	+	1	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 82 255 +
Chr1	stalkie_big_nohaplotig	CDS	121655790	121655928	.	+	1	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 256 394 +
Chr1	stalkie_big_nohaplotig	CDS	121656214	121656435	.	+	0	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 395 616 +
Chr1	stalkie_big_nohaplotig	CDS	121664900	121665052	.	+	0	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 617 769 +
Chr1	stalkie_big_nohaplotig	CDS	121665212	121665582	.	+	0	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 770 1140 +
Chr1	stalkie_big_nohaplotig	CDS	121665638	121665790	.	+	1	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 1141 1293 +
Chr1	stalkie_big_nohaplotig	CDS	121669661	121669798	.	+	1	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 1294 1431 +
Chr1	stalkie_big_nohaplotig	CDS	121669873	121670504	.	+	1	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 1432 2063 +
Chr1	stalkie_big_nohaplotig	CDS	121670602	121670746	.	+	2	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 2064 2208 +
Chr1	stalkie_big_nohaplotig	CDS	121670807	121670986	.	+	1	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 2209 2388 +
Chr1	stalkie_big_nohaplotig	CDS	121672741	121672832	.	+	1	Parent=FBgn0000108.1.mrna1;Target=FBgn0000108.1 2389 2481 +
Chr1	stalkie_big_nohaplotig	mRNA	120114233	120313392	.	+	.	ID=comp161928_c0_seq1.mrna1;geneID=comp161928_c0_seq1.path1;Name=comp161928_c0_seq1;Dir=indeterminatecoverage=93.4;identity=79.1;matches=2099;mismatches=141;indels=414;unknowns=0;locus=RLOC_00010581
Chr1	stalkie_big_nohaplotig	exon	120114233	120114242	80	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 210 201 .
Chr1	stalkie_big_nohaplotig	exon	120152491	120152498	100	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 218 211 .
Chr1	stalkie_big_nohaplotig	exon	120152717	120152755	66	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 257 219 .
Chr1	stalkie_big_nohaplotig	exon	120179837	120179877	48	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 319 258 .
Chr1	stalkie_big_nohaplotig	exon	120186950	120186956	100	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 326 320 .
Chr1	stalkie_big_nohaplotig	exon	120195336	120195351	87	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 342 327 .
Chr1	stalkie_big_nohaplotig	exon	120198424	120198434	100	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 356 346 .
Chr1	stalkie_big_nohaplotig	exon	120201209	120201217	100	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 366 358 .
Chr1	stalkie_big_nohaplotig	exon	120201605	120201638	48	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 446 399 .
Chr1	stalkie_big_nohaplotig	exon	120208125	120208147	38	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 495 447 .
Chr1	stalkie_big_nohaplotig	exon	120231966	120231974	100	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 504 496 .
Chr1	stalkie_big_nohaplotig	exon	120232711	120232719	66	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 541 530 .
Chr1	stalkie_big_nohaplotig	exon	120238244	120238255	83	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 553 542 .
Chr1	stalkie_big_nohaplotig	exon	120244516	120244534	52	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 589 556 .
Chr1	stalkie_big_nohaplotig	exon	120245123	120245125	100	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 592 590 .
Chr1	stalkie_big_nohaplotig	exon	120253140	120253148	100	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 601 593 .
Chr1	stalkie_big_nohaplotig	exon	120253752	120253769	50	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 724 689 .
Chr1	stalkie_big_nohaplotig	exon	120259377	120259414	40	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 789 728 .
Chr1	stalkie_big_nohaplotig	exon	120265470	120265505	41	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 862 790 .
Chr1	stalkie_big_nohaplotig	exon	120270309	120270314	100	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 887 882 .
Chr1	stalkie_big_nohaplotig	exon	120275435	120275446	100	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 899 888 .
Chr1	stalkie_big_nohaplotig	exon	120279378	120279424	50	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 1072 1035 .
Chr1	stalkie_big_nohaplotig	exon	120283105	120283112	62	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 1080 1073 .
Chr1	stalkie_big_nohaplotig	exon	120286521	120286531	100	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 1091 1081 .
Chr1	stalkie_big_nohaplotig	exon	120296452	120296453	100	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 1152 1151 .
Chr1	stalkie_big_nohaplotig	exon	120298301	120298309	100	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 1161 1153 .
Chr1	stalkie_big_nohaplotig	exon	120298403	120298413	100	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 1182 1172 .
Chr1	stalkie_big_nohaplotig	exon	120298429	120298436	100	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 1230 1223 .
Chr1	stalkie_big_nohaplotig	exon	120298498	120298511	57	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 1247 1238 .
Chr1	stalkie_big_nohaplotig	exon	120298536	120298561	46	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 1261 1248 .
Chr1	stalkie_big_nohaplotig	exon	120298641	120298908	27	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 1359 1262 .
Chr1	stalkie_big_nohaplotig	exon	120299261	120299287	55	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 1377 1360 .
Chr1	stalkie_big_nohaplotig	exon	120300125	120300191	52	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 1459 1378 .
Chr1	stalkie_big_nohaplotig	exon	120301041	120301051	100	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 1470 1460 .
Chr1	stalkie_big_nohaplotig	exon	120305350	120305515	98	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 1636 1471 .
Chr1	stalkie_big_nohaplotig	exon	120305590	120305730	100	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 1777 1637 .
Chr1	stalkie_big_nohaplotig	exon	120305782	120306204	99	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 2200 1778 .
Chr1	stalkie_big_nohaplotig	exon	120306262	120306591	95	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 2532 2201 .
Chr1	stalkie_big_nohaplotig	exon	120312875	120313392	97	+	.	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 3051 2533 .
Chr1	stalkie_big_nohaplotig	CDS	120305501	120305515	.	+	0	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 1636 1622 .
Chr1	stalkie_big_nohaplotig	CDS	120305590	120305730	.	+	0	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 1777 1637 .
Chr1	stalkie_big_nohaplotig	CDS	120305782	120306108	.	+	0	Parent=comp161928_c0_seq1.mrna1;Target=comp161928_c0_seq1 2104 1778 .
Chr1	gffcl	locus	120137095	120137893	.	+	.	ID=RLOC_00010582;geneIDs=comp163475_c0_seq1.path2;transcripts=comp163475_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	120137095	120137893	.	+	.	ID=comp163475_c0_seq1.mrna2;geneID=comp163475_c0_seq1.path2;Name=comp163475_c0_seq1;Dir=indeterminatecoverage=62.5;identity=98.0;matches=783;mismatches=12;indels=4;unknowns=0;Target=comp163475_c0_seq1 795 1 .;CDS_Target=comp163475_c0_seq1 330 109 .;locus=RLOC_00010582
Chr1	stalkie_big_nohaplotig	exon	120137095	120137893	97	+	.	Parent=comp163475_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	120137203	120137424	.	+	0	Parent=comp163475_c0_seq1.mrna2
Chr1	gffcl	locus	120146319	121796667	.	-	.	ID=RLOC_00010583;geneIDs=FBgn0052772.1.path1;transcripts=FBgn0052772.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120146319	121796667	.	-	.	ID=FBgn0052772.1.mrna1;geneID=FBgn0052772.1.path1;Name=FBgn0052772.1;Dir=sensecoverage=61.7;identity=95.1;matches=1337;mismatches=17;indels=52;unknowns=0;locus=RLOC_00010583
Chr1	stalkie_big_nohaplotig	exon	120146319	120146324	100	-	.	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1447 1452 +
Chr1	stalkie_big_nohaplotig	exon	120153228	120153235	100	-	.	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1439 1446 +
Chr1	stalkie_big_nohaplotig	exon	120201066	120201068	100	-	.	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1436 1438 +
Chr1	stalkie_big_nohaplotig	exon	120207258	120207261	100	-	.	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1432 1435 +
Chr1	stalkie_big_nohaplotig	exon	120208147	120208180	46	-	.	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1370 1431 +
Chr1	stalkie_big_nohaplotig	exon	120213246	120213254	100	-	.	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1305 1313 +
Chr1	stalkie_big_nohaplotig	exon	120214599	120214611	46	-	.	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1277 1304 +
Chr1	stalkie_big_nohaplotig	exon	120227403	120227421	78	-	.	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1258 1276 +
Chr1	stalkie_big_nohaplotig	exon	120228470	120228471	100	-	.	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1256 1257 +
Chr1	stalkie_big_nohaplotig	exon	120232666	120232673	100	-	.	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1248 1255 +
Chr1	stalkie_big_nohaplotig	exon	120256975	120257004	63	-	.	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1227 1247 +
Chr1	stalkie_big_nohaplotig	exon	120263323	120263330	100	-	.	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1219 1226 +
Chr1	stalkie_big_nohaplotig	exon	121790885	121791039	100	-	.	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1064 1218 +
Chr1	stalkie_big_nohaplotig	exon	121792827	121793026	100	-	.	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 864 1063 +
Chr1	stalkie_big_nohaplotig	exon	121793097	121793476	98	-	.	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 484 863 +
Chr1	stalkie_big_nohaplotig	exon	121793537	121793626	100	-	.	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 394 483 +
Chr1	stalkie_big_nohaplotig	exon	121795535	121795629	100	-	.	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 299 393 +
Chr1	stalkie_big_nohaplotig	exon	121795709	121795841	100	-	.	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 166 298 +
Chr1	stalkie_big_nohaplotig	exon	121796202	121796294	100	-	.	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 73 165 +
Chr1	stalkie_big_nohaplotig	exon	121796596	121796667	98	-	.	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1 72 +
Chr1	stalkie_big_nohaplotig	CDS	120146319	120146324	.	-	0	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1447 1452 +
Chr1	stalkie_big_nohaplotig	CDS	120153228	120153235	.	-	2	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1439 1446 +
Chr1	stalkie_big_nohaplotig	CDS	120201066	120201068	.	-	2	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1436 1438 +
Chr1	stalkie_big_nohaplotig	CDS	120207258	120207261	.	-	0	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1432 1435 +
Chr1	stalkie_big_nohaplotig	CDS	120208147	120208180	.	-	1	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1370 1431 +
Chr1	stalkie_big_nohaplotig	CDS	120213246	120213254	.	-	1	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1305 1313 +
Chr1	stalkie_big_nohaplotig	CDS	120214599	120214611	.	-	2	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1277 1304 +
Chr1	stalkie_big_nohaplotig	CDS	120227403	120227421	.	-	0	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1258 1276 +
Chr1	stalkie_big_nohaplotig	CDS	120228470	120228471	.	-	2	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1256 1257 +
Chr1	stalkie_big_nohaplotig	CDS	120232666	120232673	.	-	1	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1248 1255 +
Chr1	stalkie_big_nohaplotig	CDS	120256975	120257004	.	-	1	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1227 1247 +
Chr1	stalkie_big_nohaplotig	CDS	120263323	120263330	.	-	0	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1219 1226 +
Chr1	stalkie_big_nohaplotig	CDS	121790885	121791039	.	-	2	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1064 1218 +
Chr1	stalkie_big_nohaplotig	CDS	121792827	121793026	.	-	1	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 864 1063 +
Chr1	stalkie_big_nohaplotig	CDS	121793097	121793476	.	-	0	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 484 863 +
Chr1	stalkie_big_nohaplotig	CDS	121793537	121793626	.	-	0	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 394 483 +
Chr1	stalkie_big_nohaplotig	CDS	121795535	121795629	.	-	2	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 299 393 +
Chr1	stalkie_big_nohaplotig	CDS	121795709	121795841	.	-	0	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 166 298 +
Chr1	stalkie_big_nohaplotig	CDS	121796202	121796294	.	-	0	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 73 165 +
Chr1	stalkie_big_nohaplotig	CDS	121796596	121796667	.	-	0	Parent=FBgn0052772.1.mrna1;Target=FBgn0052772.1 1 72 +
Chr1	gffcl	locus	120297047	120297369	.	+	.	ID=RLOC_00010584;geneIDs=comp136122_c0_seq1.path1;transcripts=comp136122_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120297047	120297369	.	+	.	ID=comp136122_c0_seq1.mrna1;geneID=comp136122_c0_seq1.path1;Name=comp136122_c0_seq1;Dir=indeterminatecoverage=98.5;identity=99.4;matches=321;mismatches=2;indels=0;unknowns=0;Target=comp136122_c0_seq1 328 6 .;CDS_Target=comp136122_c0_seq1 249 169 .;locus=RLOC_00010584
Chr1	stalkie_big_nohaplotig	exon	120297047	120297369	99	+	.	Parent=comp136122_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	120297210	120297290	.	+	0	Parent=comp136122_c0_seq1.mrna1
Chr1	gffcl	locus	120301099	120301922	.	-	.	ID=RLOC_00010585;geneIDs=comp84306_c0_seq1.path1;transcripts=comp84306_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120301099	120301922	.	-	.	ID=comp84306_c0_seq1.mrna1;geneID=comp84306_c0_seq1.path1;Name=comp84306_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.6;matches=821;mismatches=3;indels=0;unknowns=0;Target=comp84306_c0_seq1 824 1 .;CDS_Target=comp84306_c0_seq1 405 262 .;locus=RLOC_00010585
Chr1	stalkie_big_nohaplotig	exon	120301099	120301922	99	-	.	Parent=comp84306_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	120301518	120301661	.	-	0	Parent=comp84306_c0_seq1.mrna1
Chr1	gffcl	locus	120331953	120332227	.	+	.	ID=RLOC_00010586;geneIDs=comp139593_c1_seq1.path1;transcripts=comp139593_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120331953	120332227	.	+	.	ID=comp139593_c1_seq1.mrna1;geneID=comp139593_c1_seq1.path1;Name=comp139593_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=275;mismatches=0;indels=0;unknowns=0;Target=comp139593_c1_seq1 275 1 .;CDS_Target=comp139593_c1_seq1 180 100 .;locus=RLOC_00010586
Chr1	stalkie_big_nohaplotig	exon	120331953	120332227	100	+	.	Parent=comp139593_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	120332052	120332132	.	+	0	Parent=comp139593_c1_seq1.mrna1
Chr1	gffcl	locus	120350611	120351747	.	+	.	ID=RLOC_00010587;geneIDs=FBgn0039270.1.path1;transcripts=FBgn0039270.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120350611	120351747	.	+	.	ID=FBgn0039270.1.mrna1;geneID=FBgn0039270.1.path1;Name=FBgn0039270.1;Dir=sensecoverage=100.0;identity=99.4;matches=1071;mismatches=6;indels=0;unknowns=0;locus=RLOC_00010587
Chr1	stalkie_big_nohaplotig	exon	120350611	120350698	98	+	.	Parent=FBgn0039270.1.mrna1;Target=FBgn0039270.1 1 88 +
Chr1	stalkie_big_nohaplotig	exon	120350759	120351747	99	+	.	Parent=FBgn0039270.1.mrna1;Target=FBgn0039270.1 89 1077 +
Chr1	stalkie_big_nohaplotig	CDS	120350611	120350698	.	+	0	Parent=FBgn0039270.1.mrna1;Target=FBgn0039270.1 1 88 +
Chr1	stalkie_big_nohaplotig	CDS	120350759	120351747	.	+	2	Parent=FBgn0039270.1.mrna1;Target=FBgn0039270.1 89 1077 +
Chr1	gffcl	locus	120352199	120356523	.	-	.	ID=RLOC_00010588;geneIDs=comp139643_c1_seq1.path1;transcripts=comp139643_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120352199	120356523	.	-	.	ID=comp139643_c1_seq1.mrna1;geneID=comp139643_c1_seq1.path1;Name=comp139643_c1_seq1;Dir=sensecoverage=100.0;identity=97.8;matches=490;mismatches=11;indels=0;unknowns=0;locus=RLOC_00010588
Chr1	stalkie_big_nohaplotig	exon	120352199	120352458	95	-	.	Parent=comp139643_c1_seq1.mrna1;Target=comp139643_c1_seq1 242 501 +
Chr1	stalkie_big_nohaplotig	exon	120353525	120353699	100	-	.	Parent=comp139643_c1_seq1.mrna1;Target=comp139643_c1_seq1 67 241 +
Chr1	stalkie_big_nohaplotig	exon	120356458	120356523	100	-	.	Parent=comp139643_c1_seq1.mrna1;Target=comp139643_c1_seq1 1 66 +
Chr1	stalkie_big_nohaplotig	CDS	120353623	120353699	.	-	2	Parent=comp139643_c1_seq1.mrna1;Target=comp139643_c1_seq1 67 143 +
Chr1	stalkie_big_nohaplotig	CDS	120356458	120356521	.	-	0	Parent=comp139643_c1_seq1.mrna1;Target=comp139643_c1_seq1 3 66 +
Chr1	gffcl	locus	120438260	120439291	.	+	.	ID=RLOC_00010589;geneIDs=FBgn0030803.1.path1;transcripts=FBgn0030803.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120438260	120439291	.	+	.	ID=FBgn0030803.1.mrna1;geneID=FBgn0030803.1.path1;Name=FBgn0030803.1;Dir=sensecoverage=100.0;identity=100.0;matches=972;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010589
Chr1	stalkie_big_nohaplotig	exon	120438260	120438316	100	+	.	Parent=FBgn0030803.1.mrna1;Target=FBgn0030803.1 1 57 +
Chr1	stalkie_big_nohaplotig	exon	120438377	120439291	100	+	.	Parent=FBgn0030803.1.mrna1;Target=FBgn0030803.1 58 972 +
Chr1	stalkie_big_nohaplotig	CDS	120438260	120438316	.	+	0	Parent=FBgn0030803.1.mrna1;Target=FBgn0030803.1 1 57 +
Chr1	stalkie_big_nohaplotig	CDS	120438377	120439291	.	+	0	Parent=FBgn0030803.1.mrna1;Target=FBgn0030803.1 58 972 +
Chr1	gffcl	locus	120439440	120439945	.	+	.	ID=RLOC_00010590;geneIDs=comp152133_c0_seq1.path1;transcripts=comp152133_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120439440	120439945	.	+	.	ID=comp152133_c0_seq1.mrna1;geneID=comp152133_c0_seq1.path1;Name=comp152133_c0_seq1;Dir=indeterminatecoverage=37.3;identity=99.2;matches=503;mismatches=3;indels=1;unknowns=0;Target=comp152133_c0_seq1 507 1 .;CDS_Target=comp152133_c0_seq1 475 350 .;locus=RLOC_00010590
Chr1	stalkie_big_nohaplotig	exon	120439440	120439945	99	+	.	Parent=comp152133_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	120439788	120439913	.	+	0	Parent=comp152133_c0_seq1.mrna1
Chr1	gffcl	locus	120483802	120484051	.	-	.	ID=RLOC_00010591;geneIDs=comp274408_c0_seq1.path1;transcripts=comp274408_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120483802	120484051	.	-	.	ID=comp274408_c0_seq1.mrna1;geneID=comp274408_c0_seq1.path1;Name=comp274408_c0_seq1;Dir=indeterminatecoverage=97.7;identity=100.0;matches=250;mismatches=0;indels=0;unknowns=0;Target=comp274408_c0_seq1 250 1 .;CDS_Target=comp274408_c0_seq1 248 99 .;locus=RLOC_00010591
Chr1	stalkie_big_nohaplotig	exon	120483802	120484051	100	-	.	Parent=comp274408_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	120483804	120483953	.	-	0	Parent=comp274408_c0_seq1.mrna1
Chr1	gffcl	locus	120488289	120488949	.	+	.	ID=RLOC_00010592;geneIDs=comp150857_c0_seq1.path1;transcripts=comp150857_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120488289	120488949	.	+	.	ID=comp150857_c0_seq1.mrna1;geneID=comp150857_c0_seq1.path1;Name=comp150857_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=657;mismatches=4;indels=2;unknowns=0;Target=comp150857_c0_seq1 663 1 .;CDS_Target=comp150857_c0_seq1 187 50 .;locus=RLOC_00010592
Chr1	stalkie_big_nohaplotig	exon	120488289	120488949	99	+	.	Parent=comp150857_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	120488338	120488475	.	+	0	Parent=comp150857_c0_seq1.mrna1
Chr1	gffcl	locus	120489809	120490411	.	+	.	ID=RLOC_00010593;geneIDs=comp156413_c0_seq1.path1;transcripts=comp156413_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120489809	120490411	.	+	.	ID=comp156413_c0_seq1.mrna1;geneID=comp156413_c0_seq1.path1;Name=comp156413_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=591;mismatches=12;indels=2;unknowns=0;Target=comp156413_c0_seq1 605 1 .;CDS_Target=comp156413_c0_seq1 153 1 .;locus=RLOC_00010593
Chr1	stalkie_big_nohaplotig	exon	120489809	120490411	97	+	.	Parent=comp156413_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	120489809	120489960	.	+	0	Parent=comp156413_c0_seq1.mrna1
Chr1	gffcl	locus	120491838	120492225	.	+	.	ID=RLOC_00010594;geneIDs=comp149518_c0_seq1.path1;transcripts=comp149518_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120491838	120492225	.	+	.	ID=comp149518_c0_seq1.mrna1;geneID=comp149518_c0_seq1.path1;Name=comp149518_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=384;mismatches=4;indels=1;unknowns=0;Target=comp149518_c0_seq1 389 1 .;CDS_Target=comp149518_c0_seq1 378 334 .;locus=RLOC_00010594
Chr1	stalkie_big_nohaplotig	exon	120491838	120492225	98	+	.	Parent=comp149518_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	120492170	120492214	.	+	0	Parent=comp149518_c0_seq1.mrna1
Chr1	gffcl	locus	120492886	120493663	.	+	.	ID=RLOC_00010595;geneIDs=comp155943_c0_seq1.path1;transcripts=comp155943_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120492886	120493663	.	+	.	ID=comp155943_c0_seq1.mrna1;geneID=comp155943_c0_seq1.path1;Name=comp155943_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.9;matches=759;mismatches=15;indels=26;unknowns=0;Target=comp155943_c0_seq1 796 1 .;CDS_Target=comp155943_c0_seq1 533 387 .;locus=RLOC_00010595
Chr1	stalkie_big_nohaplotig	exon	120492886	120493663	94	+	.	Parent=comp155943_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	120493255	120493401	.	+	0	Parent=comp155943_c0_seq1.mrna1
Chr1	gffcl	locus	120502495	120502852	.	-	.	ID=RLOC_00010596;geneIDs=comp161934_c0_seq1.path1;transcripts=comp161934_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120502495	120502852	.	-	.	ID=comp161934_c0_seq1.mrna1;geneID=comp161934_c0_seq1.path1;Name=comp161934_c0_seq1;Dir=indeterminatecoverage=99.7;identity=97.5;matches=349;mismatches=9;indels=0;unknowns=0;Target=comp161934_c0_seq1 358 1 .;CDS_Target=comp161934_c0_seq1 357 1 .;locus=RLOC_00010596
Chr1	stalkie_big_nohaplotig	exon	120502495	120502852	97	-	.	Parent=comp161934_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	120502496	120502852	.	-	0	Parent=comp161934_c0_seq1.mrna1
Chr1	gffcl	locus	120552377	120553873	.	+	.	ID=RLOC_00010597;geneIDs=comp160832_c0_seq1.path1;transcripts=comp160832_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120552377	120553873	.	+	.	ID=comp160832_c0_seq1.mrna1;geneID=comp160832_c0_seq1.path1;Name=comp160832_c0_seq1;Dir=sensecoverage=100.0;identity=96.5;matches=1254;mismatches=37;indels=9;unknowns=0;locus=RLOC_00010597
Chr1	stalkie_big_nohaplotig	exon	120552377	120552553	95	+	.	Parent=comp160832_c0_seq1.mrna1;Target=comp160832_c0_seq1 1 172 +
Chr1	stalkie_big_nohaplotig	exon	120552632	120552712	97	+	.	Parent=comp160832_c0_seq1.mrna1;Target=comp160832_c0_seq1 173 253 +
Chr1	stalkie_big_nohaplotig	exon	120552766	120553094	96	+	.	Parent=comp160832_c0_seq1.mrna1;Target=comp160832_c0_seq1 254 583 +
Chr1	stalkie_big_nohaplotig	exon	120553165	120553873	96	+	.	Parent=comp160832_c0_seq1.mrna1;Target=comp160832_c0_seq1 584 1295 +
Chr1	stalkie_big_nohaplotig	CDS	120552533	120552553	.	+	0	Parent=comp160832_c0_seq1.mrna1;Target=comp160832_c0_seq1 152 172 +
Chr1	stalkie_big_nohaplotig	CDS	120552632	120552712	.	+	0	Parent=comp160832_c0_seq1.mrna1;Target=comp160832_c0_seq1 173 253 +
Chr1	stalkie_big_nohaplotig	CDS	120552766	120553044	.	+	0	Parent=comp160832_c0_seq1.mrna1;Target=comp160832_c0_seq1 254 532 +
Chr1	gffcl	locus	120555393	120559770	.	-	.	ID=RLOC_00010598;geneIDs=FBgn0039818.1.path1;transcripts=FBgn0039818.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120555393	120559770	.	-	.	ID=FBgn0039818.1.mrna1;geneID=FBgn0039818.1.path1;Name=FBgn0039818.1;Dir=sensecoverage=99.3;identity=99.4;matches=4296;mismatches=25;indels=0;unknowns=0;locus=RLOC_00010598
Chr1	stalkie_big_nohaplotig	exon	120555393	120559598	99	-	.	Parent=FBgn0039818.1.mrna1;Target=FBgn0039818.1 145 4350 +
Chr1	stalkie_big_nohaplotig	exon	120559656	120559770	100	-	.	Parent=FBgn0039818.1.mrna1;Target=FBgn0039818.1 30 144 +
Chr1	stalkie_big_nohaplotig	CDS	120555393	120559598	.	-	0	Parent=FBgn0039818.1.mrna1;Target=FBgn0039818.1 145 4350 +
Chr1	stalkie_big_nohaplotig	CDS	120559656	120559769	.	-	0	Parent=FBgn0039818.1.mrna1;Target=FBgn0039818.1 31 144 +
Chr1	gffcl	locus	120561771	122015056	.	-	.	ID=RLOC_00010599;geneIDs=comp163400_c0_seq1.path1;transcripts=comp163400_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120561771	122015056	.	-	.	ID=comp163400_c0_seq1.mrna1;geneID=comp163400_c0_seq1.path1;Name=comp163400_c0_seq1;Dir=antisensecoverage=87.9;identity=99.7;matches=4535;mismatches=15;indels=0;unknowns=0;locus=RLOC_00010599
Chr1	stalkie_big_nohaplotig	exon	120561771	120566197	99	-	.	Parent=comp163400_c0_seq1.mrna1;Target=comp163400_c0_seq1 1 4427 -
Chr1	stalkie_big_nohaplotig	exon	120566255	120566346	100	-	.	Parent=comp163400_c0_seq1.mrna1;Target=comp163400_c0_seq1 4428 4519 -
Chr1	stalkie_big_nohaplotig	exon	122000918	122000920	100	-	.	Parent=comp163400_c0_seq1.mrna1;Target=comp163400_c0_seq1 4520 4522 -
Chr1	stalkie_big_nohaplotig	exon	122001653	122001655	100	-	.	Parent=comp163400_c0_seq1.mrna1;Target=comp163400_c0_seq1 4523 4525 -
Chr1	stalkie_big_nohaplotig	exon	122002356	122002364	100	-	.	Parent=comp163400_c0_seq1.mrna1;Target=comp163400_c0_seq1 4526 4534 -
Chr1	stalkie_big_nohaplotig	exon	122006453	122006460	100	-	.	Parent=comp163400_c0_seq1.mrna1;Target=comp163400_c0_seq1 4535 4542 -
Chr1	stalkie_big_nohaplotig	exon	122009284	122009287	100	-	.	Parent=comp163400_c0_seq1.mrna1;Target=comp163400_c0_seq1 4543 4546 -
Chr1	stalkie_big_nohaplotig	exon	122015053	122015056	100	-	.	Parent=comp163400_c0_seq1.mrna1;Target=comp163400_c0_seq1 4547 4550 -
Chr1	stalkie_big_nohaplotig	CDS	120561989	120566197	.	-	0	Parent=comp163400_c0_seq1.mrna1;Target=comp163400_c0_seq1 219 4427 .
Chr1	stalkie_big_nohaplotig	CDS	120566255	120566346	.	-	2	Parent=comp163400_c0_seq1.mrna1;Target=comp163400_c0_seq1 4428 4519 .
Chr1	stalkie_big_nohaplotig	CDS	122000918	122000920	.	-	2	Parent=comp163400_c0_seq1.mrna1;Target=comp163400_c0_seq1 4520 4522 .
Chr1	stalkie_big_nohaplotig	CDS	122001653	122001655	.	-	2	Parent=comp163400_c0_seq1.mrna1;Target=comp163400_c0_seq1 4523 4525 .
Chr1	stalkie_big_nohaplotig	CDS	122002356	122002364	.	-	2	Parent=comp163400_c0_seq1.mrna1;Target=comp163400_c0_seq1 4526 4534 .
Chr1	stalkie_big_nohaplotig	CDS	122006453	122006460	.	-	1	Parent=comp163400_c0_seq1.mrna1;Target=comp163400_c0_seq1 4535 4542 .
Chr1	stalkie_big_nohaplotig	CDS	122009284	122009287	.	-	2	Parent=comp163400_c0_seq1.mrna1;Target=comp163400_c0_seq1 4543 4546 .
Chr1	stalkie_big_nohaplotig	CDS	122015053	122015056	.	-	0	Parent=comp163400_c0_seq1.mrna1;Target=comp163400_c0_seq1 4547 4550 .
Chr1	gffcl	locus	120608594	120612213	.	+	.	ID=RLOC_00010600;geneIDs=comp158062_c3_seq1.path2,comp163163_c0_seq1.path1;transcripts=comp163163_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120609456	120612213	.	+	.	ID=comp163163_c0_seq1.mrna1;geneID=comp163163_c0_seq1.path1;Name=comp163163_c0_seq1;Dir=indeterminatecoverage=98.4;identity=96.0;matches=2383;mismatches=12;indels=86;unknowns=0;Target=comp163163_c0_seq1 2167 1895 .;locus=RLOC_00010600
Chr1	stalkie_big_nohaplotig	exon	120609456	120610387	92	+	.	Parent=comp163163_c0_seq1.mrna1;Target=comp163163_c0_seq1 1044 42 .
Chr1	stalkie_big_nohaplotig	exon	120610751	120612213	98	+	.	Parent=comp163163_c0_seq1.mrna1;Target=comp163163_c0_seq1 2522 1045 .
Chr1	stalkie_big_nohaplotig	CDS	120611586	120611858	.	+	0	Parent=comp163163_c0_seq1.mrna1
Chr1	gffcl	locus	120682085	120728193	.	-	.	ID=RLOC_00010602;geneIDs=comp138463_c0_seq1.path1;transcripts=comp138463_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120682085	120728193	.	-	.	ID=comp138463_c0_seq1.mrna1;geneID=comp138463_c0_seq1.path1;Name=comp138463_c0_seq1;Dir=indeterminatecoverage=74.8;identity=97.6;matches=203;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010602
Chr1	stalkie_big_nohaplotig	exon	120682085	120682088	100	-	.	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 221 218 .
Chr1	stalkie_big_nohaplotig	exon	120682582	120682587	100	-	.	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 217 212 .
Chr1	stalkie_big_nohaplotig	exon	120689278	120689279	100	-	.	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 211 210 .
Chr1	stalkie_big_nohaplotig	exon	120694317	120694318	100	-	.	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 209 208 .
Chr1	stalkie_big_nohaplotig	exon	120700998	120701003	100	-	.	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 207 202 .
Chr1	stalkie_big_nohaplotig	exon	120704312	120704314	100	-	.	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 201 199 .
Chr1	stalkie_big_nohaplotig	exon	120708515	120708517	100	-	.	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 198 196 .
Chr1	stalkie_big_nohaplotig	exon	120714942	120714944	100	-	.	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 195 193 .
Chr1	stalkie_big_nohaplotig	exon	120719508	120719510	100	-	.	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 192 190 .
Chr1	stalkie_big_nohaplotig	exon	120722433	120722439	100	-	.	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 189 183 .
Chr1	stalkie_big_nohaplotig	exon	120723093	120723097	100	-	.	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 182 178 .
Chr1	stalkie_big_nohaplotig	exon	120728030	120728193	96	-	.	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 177 14 .
Chr1	stalkie_big_nohaplotig	CDS	120682085	120682088	.	-	1	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 221 218 .
Chr1	stalkie_big_nohaplotig	CDS	120682582	120682587	.	-	1	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 217 212 .
Chr1	stalkie_big_nohaplotig	CDS	120689278	120689279	.	-	0	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 211 210 .
Chr1	stalkie_big_nohaplotig	CDS	120694317	120694318	.	-	2	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 209 208 .
Chr1	stalkie_big_nohaplotig	CDS	120700998	120701003	.	-	2	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 207 202 .
Chr1	stalkie_big_nohaplotig	CDS	120704312	120704314	.	-	2	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 201 199 .
Chr1	stalkie_big_nohaplotig	CDS	120708515	120708517	.	-	2	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 198 196 .
Chr1	stalkie_big_nohaplotig	CDS	120714942	120714944	.	-	2	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 195 193 .
Chr1	stalkie_big_nohaplotig	CDS	120719508	120719510	.	-	2	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 192 190 .
Chr1	stalkie_big_nohaplotig	CDS	120722433	120722439	.	-	0	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 189 183 .
Chr1	stalkie_big_nohaplotig	CDS	120723093	120723097	.	-	2	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 182 178 .
Chr1	stalkie_big_nohaplotig	CDS	120728030	120728051	.	-	0	Parent=comp138463_c0_seq1.mrna1;Target=comp138463_c0_seq1 177 156 .
Chr1	gffcl	locus	120686280	120705671	.	+	.	ID=RLOC_00010603;geneIDs=comp161927_c7_seq1.path1;transcripts=comp161927_c7_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120686280	120705671	.	+	.	ID=comp161927_c7_seq1.mrna1;geneID=comp161927_c7_seq1.path1;Name=comp161927_c7_seq1;Dir=antisensecoverage=98.5;identity=98.3;matches=2864;mismatches=46;indels=4;unknowns=0;Target=comp161927_c7_seq1 745 1854 .;locus=RLOC_00010603
Chr1	stalkie_big_nohaplotig	exon	120686280	120686690	97	+	.	Parent=comp161927_c7_seq1.mrna1;Target=comp161927_c7_seq1 2501 2911 -
Chr1	stalkie_big_nohaplotig	exon	120701607	120703913	98	+	.	Parent=comp161927_c7_seq1.mrna1;Target=comp161927_c7_seq1 196 2500 -
Chr1	stalkie_big_nohaplotig	exon	120705477	120705671	98	+	.	Parent=comp161927_c7_seq1.mrna1;Target=comp161927_c7_seq1 1 195 -
Chr1	stalkie_big_nohaplotig	CDS	120702253	120703361	.	+	0	Parent=comp161927_c7_seq1.mrna1
Chr1	gffcl	locus	120722075	120743824	.	-	.	ID=RLOC_00010604;geneIDs=comp150867_c0_seq1.path1;transcripts=comp150867_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120722075	120743824	.	-	.	ID=comp150867_c0_seq1.mrna1;geneID=comp150867_c0_seq1.path1;Name=comp150867_c0_seq1;Dir=indeterminatecoverage=84.7;identity=94.6;matches=511;mismatches=16;indels=13;unknowns=0;Target=comp150867_c0_seq1 231 151 .;locus=RLOC_00010604
Chr1	stalkie_big_nohaplotig	exon	120722075	120722081	100	-	.	Parent=comp150867_c0_seq1.mrna1;Target=comp150867_c0_seq1 542 536 .
Chr1	stalkie_big_nohaplotig	exon	120728499	120728502	100	-	.	Parent=comp150867_c0_seq1.mrna1;Target=comp150867_c0_seq1 535 532 .
Chr1	stalkie_big_nohaplotig	exon	120728573	120728581	100	-	.	Parent=comp150867_c0_seq1.mrna1;Target=comp150867_c0_seq1 531 523 .
Chr1	stalkie_big_nohaplotig	exon	120740284	120740285	100	-	.	Parent=comp150867_c0_seq1.mrna1;Target=comp150867_c0_seq1 522 521 .
Chr1	stalkie_big_nohaplotig	exon	120743315	120743824	94	-	.	Parent=comp150867_c0_seq1.mrna1;Target=comp150867_c0_seq1 514 2 .
Chr1	stalkie_big_nohaplotig	CDS	120743590	120743670	.	-	0	Parent=comp150867_c0_seq1.mrna1
Chr1	gffcl	locus	120922471	120922750	.	+	.	ID=RLOC_00010609;geneIDs=comp146068_c0_seq1.path1;transcripts=comp146068_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	120922471	120922750	.	+	.	ID=comp146068_c0_seq1.mrna1;geneID=comp146068_c0_seq1.path1;Name=comp146068_c0_seq1;Dir=indeterminatecoverage=94.9;identity=99.6;matches=279;mismatches=1;indels=0;unknowns=0;Target=comp146068_c0_seq1 280 1 .;CDS_Target=comp146068_c0_seq1 77 3 .;locus=RLOC_00010609
Chr1	stalkie_big_nohaplotig	exon	120922471	120922750	99	+	.	Parent=comp146068_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	120922473	120922547	.	+	0	Parent=comp146068_c0_seq1.mrna1
Chr1	gffcl	locus	120933691	120935495	.	-	.	ID=RLOC_00010610;geneIDs=comp162922_c0_seq1.path2;transcripts=comp162922_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	120933691	120935495	.	-	.	ID=comp162922_c0_seq1.mrna2;geneID=comp162922_c0_seq1.path2;Name=comp162922_c0_seq1;Dir=indeterminatecoverage=91.0;identity=97.5;matches=1695;mismatches=28;indels=16;unknowns=0;Target=comp162922_c0_seq1 1056 643 .;locus=RLOC_00010610
Chr1	stalkie_big_nohaplotig	exon	120933691	120933927	98	-	.	Parent=comp162922_c0_seq1.mrna2;Target=comp162922_c0_seq1 1908 1672 .
Chr1	stalkie_big_nohaplotig	exon	120934007	120935495	97	-	.	Parent=comp162922_c0_seq1.mrna2;Target=comp162922_c0_seq1 1671 173 .
Chr1	stalkie_big_nohaplotig	CDS	120934621	120935022	.	-	0	Parent=comp162922_c0_seq1.mrna2
Chr1	gffcl	locus	120993792	121008855	.	+	.	ID=RLOC_00010611;geneIDs=comp163822_c0_seq1.path2;transcripts=comp163822_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	120993792	121008855	.	+	.	ID=comp163822_c0_seq1.mrna2;geneID=comp163822_c0_seq1.path2;Name=comp163822_c0_seq1;Dir=indeterminatecoverage=77.7;identity=95.1;matches=3263;mismatches=149;indels=19;unknowns=0;Target=comp163822_c0_seq1 2391 2107 .;locus=RLOC_00010611
Chr1	stalkie_big_nohaplotig	exon	120993792	120993797	100	+	.	Parent=comp163822_c0_seq1.mrna2;Target=comp163822_c0_seq1 237 232 .
Chr1	stalkie_big_nohaplotig	exon	120997161	120997172	91	+	.	Parent=comp163822_c0_seq1.mrna2;Target=comp163822_c0_seq1 249 238 .
Chr1	stalkie_big_nohaplotig	exon	120999834	120999873	62	+	.	Parent=comp163822_c0_seq1.mrna2;Target=comp163822_c0_seq1 291 250 .
Chr1	stalkie_big_nohaplotig	exon	121005282	121005288	100	+	.	Parent=comp163822_c0_seq1.mrna2;Target=comp163822_c0_seq1 312 306 .
Chr1	stalkie_big_nohaplotig	exon	121005499	121008855	95	+	.	Parent=comp163822_c0_seq1.mrna2;Target=comp163822_c0_seq1 3664 313 .
Chr1	stalkie_big_nohaplotig	CDS	121007301	121007585	.	+	0	Parent=comp163822_c0_seq1.mrna2
Chr1	gffcl	locus	121028595	121031106	.	-	.	ID=RLOC_00010612;geneIDs=comp159014_c0_seq1.path1;transcripts=comp159014_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121028595	121031106	.	-	.	ID=comp159014_c0_seq1.mrna1;geneID=comp159014_c0_seq1.path1;Name=comp159014_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=2484;mismatches=28;indels=0;unknowns=0;Target=comp159014_c0_seq1 2512 1 .;CDS_Target=comp159014_c0_seq1 2512 2 .;locus=RLOC_00010612
Chr1	stalkie_big_nohaplotig	exon	121028595	121031106	98	-	.	Parent=comp159014_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121028595	121031105	.	-	0	Parent=comp159014_c0_seq1.mrna1
Chr1	gffcl	locus	121067719	121069239	.	-	.	ID=RLOC_00010613;geneIDs=comp162269_c9_seq1.path1;transcripts=comp162269_c9_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121067719	121069239	.	-	.	ID=comp162269_c9_seq1.mrna1;geneID=comp162269_c9_seq1.path1;Name=comp162269_c9_seq1;Dir=indeterminatecoverage=99.9;identity=99.6;matches=1515;mismatches=6;indels=0;unknowns=0;Target=comp162269_c9_seq1 1522 2 .;CDS_Target=comp162269_c9_seq1 1156 2 .;locus=RLOC_00010613
Chr1	stalkie_big_nohaplotig	exon	121067719	121069239	99	-	.	Parent=comp162269_c9_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121068085	121069239	.	-	0	Parent=comp162269_c9_seq1.mrna1
Chr1	gffcl	locus	121160275	121176202	.	+	.	ID=RLOC_00010614;geneIDs=comp163528_c1_seq1.path1;transcripts=comp163528_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121160275	121176202	.	+	.	ID=comp163528_c1_seq1.mrna1;geneID=comp163528_c1_seq1.path1;Name=comp163528_c1_seq1;Dir=sensecoverage=75.7;identity=92.2;matches=960;mismatches=41;indels=40;unknowns=0;Target=comp163528_c1_seq1 627 731 +;locus=RLOC_00010614
Chr1	stalkie_big_nohaplotig	exon	121160275	121160837	99	+	.	Parent=comp163528_c1_seq1.mrna1;Target=comp163528_c1_seq1 1 563 +
Chr1	stalkie_big_nohaplotig	exon	121160900	121161144	90	+	.	Parent=comp163528_c1_seq1.mrna1;Target=comp163528_c1_seq1 564 824 +
Chr1	stalkie_big_nohaplotig	exon	121162145	121162267	91	+	.	Parent=comp163528_c1_seq1.mrna1;Target=comp163528_c1_seq1 825 947 +
Chr1	stalkie_big_nohaplotig	exon	121176046	121176088	44	+	.	Parent=comp163528_c1_seq1.mrna1;Target=comp163528_c1_seq1 1075 1101 +
Chr1	stalkie_big_nohaplotig	exon	121176152	121176202	62	+	.	Parent=comp163528_c1_seq1.mrna1;Target=comp163528_c1_seq1 1104 1146 +
Chr1	stalkie_big_nohaplotig	CDS	121160963	121161067	.	+	0	Parent=comp163528_c1_seq1.mrna1
Chr1	gffcl	locus	121163750	122358926	.	.	.	ID=RLOC_00010615;geneIDs=comp155332_c0_seq1.path1,comp163929_c1_seq1.path1;transcripts=comp163929_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121164653	122358926	.	+	.	ID=comp163929_c1_seq1.mrna1;geneID=comp163929_c1_seq1.path1;Name=comp163929_c1_seq1;Dir=indeterminatecoverage=91.8;identity=94.2;matches=2879;mismatches=82;indels=94;unknowns=0;Target=comp163929_c1_seq1 897 586 .;locus=RLOC_00010615
Chr1	stalkie_big_nohaplotig	exon	121164653	121166122	96	+	.	Parent=comp163929_c1_seq1.mrna1;Target=comp163929_c1_seq1 1504 1 .
Chr1	stalkie_big_nohaplotig	exon	121168057	121169262	97	+	.	Parent=comp163929_c1_seq1.mrna1;Target=comp163929_c1_seq1 2719 1512 .
Chr1	stalkie_big_nohaplotig	exon	121169454	121169570	99	+	.	Parent=comp163929_c1_seq1.mrna1;Target=comp163929_c1_seq1 2837 2721 .
Chr1	stalkie_big_nohaplotig	exon	122306636	122306641	100	+	.	Parent=comp163929_c1_seq1.mrna1;Target=comp163929_c1_seq1 3057 3052 .
Chr1	stalkie_big_nohaplotig	exon	122318257	122318266	100	+	.	Parent=comp163929_c1_seq1.mrna1;Target=comp163929_c1_seq1 3067 3058 .
Chr1	stalkie_big_nohaplotig	exon	122318365	122318420	47	+	.	Parent=comp163929_c1_seq1.mrna1;Target=comp163929_c1_seq1 3123 3069 .
Chr1	stalkie_big_nohaplotig	exon	122325361	122325370	100	+	.	Parent=comp163929_c1_seq1.mrna1;Target=comp163929_c1_seq1 3133 3124 .
Chr1	stalkie_big_nohaplotig	exon	122337485	122337492	22	+	.	Parent=comp163929_c1_seq1.mrna1;Target=comp163929_c1_seq1 3208 3174 .
Chr1	stalkie_big_nohaplotig	exon	122344007	122344017	100	+	.	Parent=comp163929_c1_seq1.mrna1;Target=comp163929_c1_seq1 3221 3211 .
Chr1	stalkie_big_nohaplotig	exon	122347611	122347671	56	+	.	Parent=comp163929_c1_seq1.mrna1;Target=comp163929_c1_seq1 3305 3235 .
Chr1	stalkie_big_nohaplotig	exon	122351052	122351055	100	+	.	Parent=comp163929_c1_seq1.mrna1;Target=comp163929_c1_seq1 3309 3306 .
Chr1	stalkie_big_nohaplotig	exon	122357471	122357475	100	+	.	Parent=comp163929_c1_seq1.mrna1;Target=comp163929_c1_seq1 3314 3310 .
Chr1	stalkie_big_nohaplotig	exon	122358920	122358926	100	+	.	Parent=comp163929_c1_seq1.mrna1;Target=comp163929_c1_seq1 3321 3315 .
Chr1	stalkie_big_nohaplotig	CDS	121165204	121165515	.	+	0	Parent=comp163929_c1_seq1.mrna1
Chr1	gffcl	locus	121171328	121172258	.	-	.	ID=RLOC_00010616;geneIDs=comp158571_c2_seq1.path1;transcripts=comp158571_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121171328	121172258	.	-	.	ID=comp158571_c2_seq1.mrna1;geneID=comp158571_c2_seq1.path1;Name=comp158571_c2_seq1;Dir=indeterminatecoverage=57.1;identity=99.1;matches=926;mismatches=5;indels=3;unknowns=0;Target=comp158571_c2_seq1 934 1 .;CDS_Target=comp158571_c2_seq1 860 207 .;locus=RLOC_00010616
Chr1	stalkie_big_nohaplotig	exon	121171328	121172258	99	-	.	Parent=comp158571_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121171402	121172055	.	-	0	Parent=comp158571_c2_seq1.mrna1
Chr1	gffcl	locus	121287923	121289357	.	-	.	ID=RLOC_00010617;geneIDs=comp161069_c0_seq1.path1;transcripts=comp161069_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121287923	121289357	.	-	.	ID=comp161069_c0_seq1.mrna1;geneID=comp161069_c0_seq1.path1;Name=comp161069_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.6;matches=1375;mismatches=9;indels=10;unknowns=0;Target=comp161069_c0_seq1 791 648 .;locus=RLOC_00010617
Chr1	stalkie_big_nohaplotig	exon	121287923	121288803	99	-	.	Parent=comp161069_c0_seq1.mrna1;Target=comp161069_c0_seq1 1395 515 .
Chr1	stalkie_big_nohaplotig	exon	121288855	121289357	97	-	.	Parent=comp161069_c0_seq1.mrna1;Target=comp161069_c0_seq1 514 2 .
Chr1	stalkie_big_nohaplotig	CDS	121288527	121288670	.	-	0	Parent=comp161069_c0_seq1.mrna1
Chr1	gffcl	locus	121289396	121293040	.	+	.	ID=RLOC_00010618;geneIDs=comp162503_c1_seq1.path1;transcripts=comp162503_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121289396	121293040	.	+	.	ID=comp162503_c1_seq1.mrna1;geneID=comp162503_c1_seq1.path1;Name=comp162503_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=3626;mismatches=19;indels=5;unknowns=0;Target=comp162503_c1_seq1 3650 1 .;CDS_Target=comp162503_c1_seq1 3474 2722 .;locus=RLOC_00010618
Chr1	stalkie_big_nohaplotig	exon	121289396	121293040	99	+	.	Parent=comp162503_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121292112	121292864	.	+	0	Parent=comp162503_c1_seq1.mrna1
Chr1	gffcl	locus	121296265	121298045	.	+	.	ID=RLOC_00010619;geneIDs=comp158342_c4_seq1.path1;transcripts=comp158342_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121296265	121298045	.	+	.	ID=comp158342_c4_seq1.mrna1;geneID=comp158342_c4_seq1.path1;Name=comp158342_c4_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1762;mismatches=18;indels=1;unknowns=0;Target=comp158342_c4_seq1 1780 1 .;CDS_Target=comp158342_c4_seq1 1026 589 .;locus=RLOC_00010619
Chr1	stalkie_big_nohaplotig	exon	121296265	121298045	98	+	.	Parent=comp158342_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121296853	121297290	.	+	0	Parent=comp158342_c4_seq1.mrna1
Chr1	gffcl	locus	121318251	121319339	.	+	.	ID=RLOC_00010620;geneIDs=comp161736_c0_seq1.path1;transcripts=comp161736_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121318251	121319339	.	+	.	ID=comp161736_c0_seq1.mrna1;geneID=comp161736_c0_seq1.path1;Name=comp161736_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=1069;mismatches=20;indels=1;unknowns=0;Target=comp161736_c0_seq1 1090 1 .;CDS_Target=comp161736_c0_seq1 828 721 .;locus=RLOC_00010620
Chr1	stalkie_big_nohaplotig	exon	121318251	121319339	98	+	.	Parent=comp161736_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121318970	121319077	.	+	0	Parent=comp161736_c0_seq1.mrna1
Chr1	gffcl	locus	121325852	123026521	.	+	.	ID=RLOC_00010621;geneIDs=comp159744_c0_seq1.path1;transcripts=comp159744_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121325852	123026521	.	+	.	ID=comp159744_c0_seq1.mrna1;geneID=comp159744_c0_seq1.path1;Name=comp159744_c0_seq1;Dir=indeterminatecoverage=90.3;identity=91.8;matches=1754;mismatches=63;indels=93;unknowns=0;Target=comp159744_c0_seq1 825 619 .;locus=RLOC_00010621
Chr1	stalkie_big_nohaplotig	exon	121325852	121326710	98	+	.	Parent=comp159744_c0_seq1.mrna1;Target=comp159744_c0_seq1 928 70 .
Chr1	stalkie_big_nohaplotig	exon	121326926	121327112	94	+	.	Parent=comp159744_c0_seq1.mrna1;Target=comp159744_c0_seq1 1112 929 .
Chr1	stalkie_big_nohaplotig	exon	121327130	121327826	87	+	.	Parent=comp159744_c0_seq1.mrna1;Target=comp159744_c0_seq1 1851 1113 .
Chr1	stalkie_big_nohaplotig	exon	121329681	121329693	84	+	.	Parent=comp159744_c0_seq1.mrna1;Target=comp159744_c0_seq1 1864 1852 .
Chr1	stalkie_big_nohaplotig	exon	121361229	121361241	92	+	.	Parent=comp159744_c0_seq1.mrna1;Target=comp159744_c0_seq1 1877 1865 .
Chr1	stalkie_big_nohaplotig	exon	121365688	121365718	43	+	.	Parent=comp159744_c0_seq1.mrna1;Target=comp159744_c0_seq1 1956 1922 .
Chr1	stalkie_big_nohaplotig	exon	121515100	121515105	100	+	.	Parent=comp159744_c0_seq1.mrna1;Target=comp159744_c0_seq1 1965 1960 .
Chr1	stalkie_big_nohaplotig	exon	121527365	121527376	100	+	.	Parent=comp159744_c0_seq1.mrna1;Target=comp159744_c0_seq1 1977 1966 .
Chr1	stalkie_big_nohaplotig	exon	123010505	123010510	13	+	.	Parent=comp159744_c0_seq1.mrna1;Target=comp159744_c0_seq1 2036 2015 .
Chr1	stalkie_big_nohaplotig	exon	123024177	123024178	100	+	.	Parent=comp159744_c0_seq1.mrna1;Target=comp159744_c0_seq1 2038 2037 .
Chr1	stalkie_big_nohaplotig	exon	123026514	123026521	100	+	.	Parent=comp159744_c0_seq1.mrna1;Target=comp159744_c0_seq1 2046 2039 .
Chr1	stalkie_big_nohaplotig	CDS	121326401	121326607	.	+	0	Parent=comp159744_c0_seq1.mrna1
Chr1	gffcl	locus	121333180	121335283	.	-	.	ID=RLOC_00010622;geneIDs=comp160492_c4_seq1.path1;transcripts=comp160492_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121333180	121335283	.	-	.	ID=comp160492_c4_seq1.mrna1;geneID=comp160492_c4_seq1.path1;Name=comp160492_c4_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=2068;mismatches=28;indels=26;unknowns=0;Target=comp160492_c4_seq1 334 98 .;locus=RLOC_00010622
Chr1	stalkie_big_nohaplotig	exon	121333180	121334565	96	-	.	Parent=comp160492_c4_seq1.mrna1;Target=comp160492_c4_seq1 2191 783 .
Chr1	stalkie_big_nohaplotig	exon	121334573	121335283	99	-	.	Parent=comp160492_c4_seq1.mrna1;Target=comp160492_c4_seq1 712 1 .
Chr1	stalkie_big_nohaplotig	CDS	121334950	121335186	.	-	0	Parent=comp160492_c4_seq1.mrna1
Chr1	gffcl	locus	121344230	121346710	.	+	.	ID=RLOC_00010623;geneIDs=comp159522_c0_seq1.path1;transcripts=comp159522_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121344230	121346710	.	+	.	ID=comp159522_c0_seq1.mrna1;geneID=comp159522_c0_seq1.path1;Name=comp159522_c0_seq1;Dir=sensecoverage=98.8;identity=97.6;matches=1570;mismatches=22;indels=17;unknowns=0;Target=comp159522_c0_seq1 1206 1325 +;locus=RLOC_00010623
Chr1	stalkie_big_nohaplotig	exon	121344230	121344641	99	+	.	Parent=comp159522_c0_seq1.mrna1;Target=comp159522_c0_seq1 20 431 +
Chr1	stalkie_big_nohaplotig	exon	121344703	121344956	94	+	.	Parent=comp159522_c0_seq1.mrna1;Target=comp159522_c0_seq1 432 694 +
Chr1	stalkie_big_nohaplotig	exon	121345369	121345697	97	+	.	Parent=comp159522_c0_seq1.mrna1;Target=comp159522_c0_seq1 695 1024 +
Chr1	stalkie_big_nohaplotig	exon	121345751	121345899	91	+	.	Parent=comp159522_c0_seq1.mrna1;Target=comp159522_c0_seq1 1025 1180 +
Chr1	stalkie_big_nohaplotig	exon	121346263	121346710	99	+	.	Parent=comp159522_c0_seq1.mrna1;Target=comp159522_c0_seq1 1181 1628 +
Chr1	stalkie_big_nohaplotig	CDS	121346288	121346407	.	+	0	Parent=comp159522_c0_seq1.mrna1
Chr1	gffcl	locus	121347224	121491607	.	-	.	ID=RLOC_00010624;geneIDs=comp158653_c0_seq1.path1,comp160687_c0_seq1.path1;transcripts=comp158653_c0_seq1.mrna1,comp160687_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121347224	121491607	.	-	.	ID=comp158653_c0_seq1.mrna1;geneID=comp158653_c0_seq1.path1;Name=comp158653_c0_seq1;Dir=indeterminatecoverage=65.9;identity=98.9;matches=529;mismatches=5;indels=1;unknowns=0;Target=comp158653_c0_seq1 769 518 .;locus=RLOC_00010624
Chr1	stalkie_big_nohaplotig	exon	121347224	121347664	99	-	.	Parent=comp158653_c0_seq1.mrna1;Target=comp158653_c0_seq1 831 391 .
Chr1	stalkie_big_nohaplotig	exon	121420864	121420866	100	-	.	Parent=comp158653_c0_seq1.mrna1;Target=comp158653_c0_seq1 390 388 .
Chr1	stalkie_big_nohaplotig	exon	121423992	121423995	100	-	.	Parent=comp158653_c0_seq1.mrna1;Target=comp158653_c0_seq1 387 384 .
Chr1	stalkie_big_nohaplotig	exon	121426056	121426058	100	-	.	Parent=comp158653_c0_seq1.mrna1;Target=comp158653_c0_seq1 383 381 .
Chr1	stalkie_big_nohaplotig	exon	121427031	121427035	100	-	.	Parent=comp158653_c0_seq1.mrna1;Target=comp158653_c0_seq1 380 376 .
Chr1	stalkie_big_nohaplotig	exon	121428018	121428024	100	-	.	Parent=comp158653_c0_seq1.mrna1;Target=comp158653_c0_seq1 375 369 .
Chr1	stalkie_big_nohaplotig	exon	121434109	121434131	83	-	.	Parent=comp158653_c0_seq1.mrna1;Target=comp158653_c0_seq1 368 345 .
Chr1	stalkie_big_nohaplotig	exon	121437632	121437634	66	-	.	Parent=comp158653_c0_seq1.mrna1;Target=comp158653_c0_seq1 331 329 .
Chr1	stalkie_big_nohaplotig	exon	121445712	121445721	100	-	.	Parent=comp158653_c0_seq1.mrna1;Target=comp158653_c0_seq1 328 319 .
Chr1	stalkie_big_nohaplotig	exon	121445870	121445876	100	-	.	Parent=comp158653_c0_seq1.mrna1;Target=comp158653_c0_seq1 318 312 .
Chr1	stalkie_big_nohaplotig	exon	121446412	121446414	100	-	.	Parent=comp158653_c0_seq1.mrna1;Target=comp158653_c0_seq1 311 309 .
Chr1	stalkie_big_nohaplotig	exon	121452507	121452509	100	-	.	Parent=comp158653_c0_seq1.mrna1;Target=comp158653_c0_seq1 308 306 .
Chr1	stalkie_big_nohaplotig	exon	121459214	121459220	100	-	.	Parent=comp158653_c0_seq1.mrna1;Target=comp158653_c0_seq1 305 299 .
Chr1	stalkie_big_nohaplotig	exon	121473338	121473343	100	-	.	Parent=comp158653_c0_seq1.mrna1;Target=comp158653_c0_seq1 298 293 .
Chr1	stalkie_big_nohaplotig	exon	121491599	121491607	100	-	.	Parent=comp158653_c0_seq1.mrna1;Target=comp158653_c0_seq1 292 284 .
Chr1	stalkie_big_nohaplotig	CDS	121347286	121347537	.	-	0	Parent=comp158653_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121423346	121426301	.	-	.	ID=comp160687_c0_seq1.mrna1;geneID=comp160687_c0_seq1.path1;Name=comp160687_c0_seq1;Dir=sensecoverage=100.0;identity=97.5;matches=1493;mismatches=6;indels=33;unknowns=0;locus=RLOC_00010624
Chr1	stalkie_big_nohaplotig	exon	121423346	121423568	100	-	.	Parent=comp160687_c0_seq1.mrna1;Target=comp160687_c0_seq1 1304 1526 +
Chr1	stalkie_big_nohaplotig	exon	121423657	121423792	100	-	.	Parent=comp160687_c0_seq1.mrna1;Target=comp160687_c0_seq1 1168 1303 +
Chr1	stalkie_big_nohaplotig	exon	121423862	121424227	95	-	.	Parent=comp160687_c0_seq1.mrna1;Target=comp160687_c0_seq1 799 1167 +
Chr1	stalkie_big_nohaplotig	exon	121424688	121424881	95	-	.	Parent=comp160687_c0_seq1.mrna1;Target=comp160687_c0_seq1 596 798 +
Chr1	stalkie_big_nohaplotig	exon	121425716	121426301	97	-	.	Parent=comp160687_c0_seq1.mrna1;Target=comp160687_c0_seq1 1 595 +
Chr1	stalkie_big_nohaplotig	CDS	121424843	121424881	.	-	0	Parent=comp160687_c0_seq1.mrna1;Target=comp160687_c0_seq1 596 643 +
Chr1	stalkie_big_nohaplotig	CDS	121425716	121425850	.	-	0	Parent=comp160687_c0_seq1.mrna1;Target=comp160687_c0_seq1 461 595 +
Chr1	gffcl	locus	121349799	121351794	.	-	.	ID=RLOC_00010625;geneIDs=comp158381_c1_seq1.path1;transcripts=comp158381_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121349799	121351794	.	-	.	ID=comp158381_c1_seq1.mrna1;geneID=comp158381_c1_seq1.path1;Name=comp158381_c1_seq1;Dir=indeterminatecoverage=85.8;identity=97.4;matches=1946;mismatches=29;indels=22;unknowns=0;Target=comp158381_c1_seq1 2016 41 .;CDS_Target=comp158381_c1_seq1 561 349 .;locus=RLOC_00010625
Chr1	stalkie_big_nohaplotig	exon	121349799	121351794	97	-	.	Parent=comp158381_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121351253	121351485	.	-	0	Parent=comp158381_c1_seq1.mrna1
Chr1	gffcl	locus	121419184	121419527	.	-	.	ID=RLOC_00010626;geneIDs=comp142557_c0_seq1.path1;transcripts=comp142557_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121419184	121419527	.	-	.	ID=comp142557_c0_seq1.mrna1;geneID=comp142557_c0_seq1.path1;Name=comp142557_c0_seq1;Dir=indeterminatecoverage=91.3;identity=96.5;matches=333;mismatches=2;indels=10;unknowns=0;Target=comp142557_c0_seq1 336 1 .;CDS_Target=comp142557_c0_seq1 214 89 .;locus=RLOC_00010626
Chr1	stalkie_big_nohaplotig	exon	121419184	121419527	96	-	.	Parent=comp142557_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121419314	121419439	.	-	0	Parent=comp142557_c0_seq1.mrna1
Chr1	gffcl	locus	121421682	121422808	.	+	.	ID=RLOC_00010627;geneIDs=comp160632_c2_seq1.path1;transcripts=comp160632_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121421682	121422808	.	+	.	ID=comp160632_c2_seq1.mrna1;geneID=comp160632_c2_seq1.path1;Name=comp160632_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1121;mismatches=6;indels=0;unknowns=0;Target=comp160632_c2_seq1 1127 1 .;CDS_Target=comp160632_c2_seq1 530 192 .;locus=RLOC_00010627
Chr1	stalkie_big_nohaplotig	exon	121421682	121422808	99	+	.	Parent=comp160632_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121421873	121422211	.	+	0	Parent=comp160632_c2_seq1.mrna1
Chr1	gffcl	locus	121442217	121443491	.	+	.	ID=RLOC_00010628;geneIDs=comp150290_c0_seq1.path1;transcripts=comp150290_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121442217	121443491	.	+	.	ID=comp150290_c0_seq1.mrna1;geneID=comp150290_c0_seq1.path1;Name=comp150290_c0_seq1;Dir=indeterminatecoverage=86.0;identity=99.8;matches=1273;mismatches=2;indels=1;unknowns=0;Target=comp150290_c0_seq1 1276 1 .;CDS_Target=comp150290_c0_seq1 1188 934 .;locus=RLOC_00010628
Chr1	stalkie_big_nohaplotig	exon	121442217	121443491	99	+	.	Parent=comp150290_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121443149	121443403	.	+	0	Parent=comp150290_c0_seq1.mrna1
Chr1	gffcl	locus	121449193	121451487	.	+	.	ID=RLOC_00010629;geneIDs=comp163712_c2_seq1.path1;transcripts=comp163712_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121449193	121451487	.	+	.	ID=comp163712_c2_seq1.mrna1;geneID=comp163712_c2_seq1.path1;Name=comp163712_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=2107;mismatches=13;indels=1;unknowns=0;Target=comp163712_c2_seq1 1020 856 .;locus=RLOC_00010629
Chr1	stalkie_big_nohaplotig	exon	121449193	121449232	100	+	.	Parent=comp163712_c2_seq1.mrna1;Target=comp163712_c2_seq1 40 1 .
Chr1	stalkie_big_nohaplotig	exon	121449408	121451487	99	+	.	Parent=comp163712_c2_seq1.mrna1;Target=comp163712_c2_seq1 2121 41 .
Chr1	stalkie_big_nohaplotig	CDS	121450223	121450387	.	+	0	Parent=comp163712_c2_seq1.mrna1
Chr1	gffcl	locus	121453438	121453881	.	+	.	ID=RLOC_00010630;geneIDs=comp154784_c0_seq1.path2;transcripts=comp154784_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	121453438	121453881	.	+	.	ID=comp154784_c0_seq1.mrna2;geneID=comp154784_c0_seq1.path2;Name=comp154784_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.8;matches=338;mismatches=11;indels=0;unknowns=0;Target=comp154784_c0_seq1 161 84 .;locus=RLOC_00010630
Chr1	stalkie_big_nohaplotig	exon	121453438	121453713	96	+	.	Parent=comp154784_c0_seq1.mrna2;Target=comp154784_c0_seq1 276 1 .
Chr1	stalkie_big_nohaplotig	exon	121453809	121453881	97	+	.	Parent=comp154784_c0_seq1.mrna2;Target=comp154784_c0_seq1 349 277 .
Chr1	stalkie_big_nohaplotig	CDS	121453521	121453598	.	+	0	Parent=comp154784_c0_seq1.mrna2
Chr1	gffcl	locus	121454167	121454778	.	-	.	ID=RLOC_00010631;geneIDs=comp140512_c0_seq1.path2;transcripts=comp140512_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	121454167	121454778	.	-	.	ID=comp140512_c0_seq1.mrna2;geneID=comp140512_c0_seq1.path2;Name=comp140512_c0_seq1;Dir=indeterminatecoverage=99.5;identity=92.8;matches=386;mismatches=4;indels=26;unknowns=0;Target=comp140512_c0_seq1 393 283 .;locus=RLOC_00010631
Chr1	stalkie_big_nohaplotig	exon	121454167	121454401	90	-	.	Parent=comp140512_c0_seq1.mrna2;Target=comp140512_c0_seq1 408 171 .
Chr1	stalkie_big_nohaplotig	exon	121454616	121454778	95	-	.	Parent=comp140512_c0_seq1.mrna2;Target=comp140512_c0_seq1 170 1 .
Chr1	stalkie_big_nohaplotig	CDS	121454182	121454292	.	-	0	Parent=comp140512_c0_seq1.mrna2
Chr1	gffcl	locus	121455468	121455963	.	+	.	ID=RLOC_00010632;geneIDs=comp142816_c0_seq1.path1;transcripts=comp142816_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121455468	121455963	.	+	.	ID=comp142816_c0_seq1.mrna1;geneID=comp142816_c0_seq1.path1;Name=comp142816_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=494;mismatches=2;indels=1;unknowns=0;Target=comp142816_c0_seq1 497 1 .;CDS_Target=comp142816_c0_seq1 485 345 .;locus=RLOC_00010632
Chr1	stalkie_big_nohaplotig	exon	121455468	121455963	99	+	.	Parent=comp142816_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121455812	121455951	.	+	0	Parent=comp142816_c0_seq1.mrna1
Chr1	gffcl	locus	121456566	121460108	.	-	.	ID=RLOC_00010633;geneIDs=FBgn0024985.1.path1;transcripts=FBgn0024985.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121456566	121460108	.	-	.	ID=FBgn0024985.1.mrna1;geneID=FBgn0024985.1.path1;Name=FBgn0024985.1;Dir=sensecoverage=100.0;identity=100.0;matches=1323;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010633
Chr1	stalkie_big_nohaplotig	exon	121456566	121456680	100	-	.	Parent=FBgn0024985.1.mrna1;Target=FBgn0024985.1 1209 1323 +
Chr1	stalkie_big_nohaplotig	exon	121456751	121456846	100	-	.	Parent=FBgn0024985.1.mrna1;Target=FBgn0024985.1 1113 1208 +
Chr1	stalkie_big_nohaplotig	exon	121456913	121457352	100	-	.	Parent=FBgn0024985.1.mrna1;Target=FBgn0024985.1 673 1112 +
Chr1	stalkie_big_nohaplotig	exon	121459353	121459661	100	-	.	Parent=FBgn0024985.1.mrna1;Target=FBgn0024985.1 364 672 +
Chr1	stalkie_big_nohaplotig	exon	121459746	121460108	100	-	.	Parent=FBgn0024985.1.mrna1;Target=FBgn0024985.1 1 363 +
Chr1	stalkie_big_nohaplotig	CDS	121456566	121456680	.	-	1	Parent=FBgn0024985.1.mrna1;Target=FBgn0024985.1 1209 1323 +
Chr1	stalkie_big_nohaplotig	CDS	121456751	121456846	.	-	1	Parent=FBgn0024985.1.mrna1;Target=FBgn0024985.1 1113 1208 +
Chr1	stalkie_big_nohaplotig	CDS	121456913	121457352	.	-	0	Parent=FBgn0024985.1.mrna1;Target=FBgn0024985.1 673 1112 +
Chr1	stalkie_big_nohaplotig	CDS	121459353	121459661	.	-	0	Parent=FBgn0024985.1.mrna1;Target=FBgn0024985.1 364 672 +
Chr1	stalkie_big_nohaplotig	CDS	121459746	121460108	.	-	0	Parent=FBgn0024985.1.mrna1;Target=FBgn0024985.1 1 363 +
Chr1	gffcl	locus	121461211	121475945	.	+	.	ID=RLOC_00010634;geneIDs=Dv_FBgn0203035.1.path1;transcripts=Dv_FBgn0203035.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121461211	121475945	.	+	.	ID=Dv_FBgn0203035.1.mrna1;geneID=Dv_FBgn0203035.1.path1;Name=Dv_FBgn0203035.1;Dir=sensecoverage=100.0;identity=99.8;matches=2168;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010634
Chr1	stalkie_big_nohaplotig	exon	121461211	121461285	100	+	.	Parent=Dv_FBgn0203035.1.mrna1;Target=Dv_FBgn0203035.1 1 75 +
Chr1	stalkie_big_nohaplotig	exon	121472491	121472922	99	+	.	Parent=Dv_FBgn0203035.1.mrna1;Target=Dv_FBgn0203035.1 76 507 +
Chr1	stalkie_big_nohaplotig	exon	121472988	121473198	100	+	.	Parent=Dv_FBgn0203035.1.mrna1;Target=Dv_FBgn0203035.1 508 718 +
Chr1	stalkie_big_nohaplotig	exon	121473258	121473703	99	+	.	Parent=Dv_FBgn0203035.1.mrna1;Target=Dv_FBgn0203035.1 719 1164 +
Chr1	stalkie_big_nohaplotig	exon	121473765	121473928	99	+	.	Parent=Dv_FBgn0203035.1.mrna1;Target=Dv_FBgn0203035.1 1165 1328 +
Chr1	stalkie_big_nohaplotig	exon	121473987	121474185	100	+	.	Parent=Dv_FBgn0203035.1.mrna1;Target=Dv_FBgn0203035.1 1329 1527 +
Chr1	stalkie_big_nohaplotig	exon	121475076	121475268	100	+	.	Parent=Dv_FBgn0203035.1.mrna1;Target=Dv_FBgn0203035.1 1528 1720 +
Chr1	stalkie_big_nohaplotig	exon	121475430	121475534	100	+	.	Parent=Dv_FBgn0203035.1.mrna1;Target=Dv_FBgn0203035.1 1721 1825 +
Chr1	stalkie_big_nohaplotig	exon	121475599	121475945	99	+	.	Parent=Dv_FBgn0203035.1.mrna1;Target=Dv_FBgn0203035.1 1826 2172 +
Chr1	stalkie_big_nohaplotig	CDS	121461211	121461285	.	+	0	Parent=Dv_FBgn0203035.1.mrna1;Target=Dv_FBgn0203035.1 1 75 +
Chr1	stalkie_big_nohaplotig	CDS	121472491	121472922	.	+	0	Parent=Dv_FBgn0203035.1.mrna1;Target=Dv_FBgn0203035.1 76 507 +
Chr1	stalkie_big_nohaplotig	CDS	121472988	121473198	.	+	0	Parent=Dv_FBgn0203035.1.mrna1;Target=Dv_FBgn0203035.1 508 718 +
Chr1	stalkie_big_nohaplotig	CDS	121473258	121473703	.	+	2	Parent=Dv_FBgn0203035.1.mrna1;Target=Dv_FBgn0203035.1 719 1164 +
Chr1	stalkie_big_nohaplotig	CDS	121473765	121473928	.	+	0	Parent=Dv_FBgn0203035.1.mrna1;Target=Dv_FBgn0203035.1 1165 1328 +
Chr1	stalkie_big_nohaplotig	CDS	121473987	121474185	.	+	1	Parent=Dv_FBgn0203035.1.mrna1;Target=Dv_FBgn0203035.1 1329 1527 +
Chr1	stalkie_big_nohaplotig	CDS	121475076	121475268	.	+	0	Parent=Dv_FBgn0203035.1.mrna1;Target=Dv_FBgn0203035.1 1528 1720 +
Chr1	stalkie_big_nohaplotig	CDS	121475430	121475534	.	+	2	Parent=Dv_FBgn0203035.1.mrna1;Target=Dv_FBgn0203035.1 1721 1825 +
Chr1	stalkie_big_nohaplotig	CDS	121475599	121475945	.	+	2	Parent=Dv_FBgn0203035.1.mrna1;Target=Dv_FBgn0203035.1 1826 2172 +
Chr1	gffcl	locus	121478370	121486661	.	-	.	ID=RLOC_00010635;geneIDs=FBgn0031077.1.path1;transcripts=FBgn0031077.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121478370	121486661	.	-	.	ID=FBgn0031077.1.mrna1;geneID=FBgn0031077.1.path1;Name=FBgn0031077.1;Dir=sensecoverage=100.0;identity=99.6;matches=5122;mismatches=22;indels=1;unknowns=0;Target=FBgn0031077.1 3 74 +;locus=RLOC_00010635
Chr1	stalkie_big_nohaplotig	exon	121478370	121478701	99	-	.	Parent=FBgn0031077.1.mrna1;Target=FBgn0031077.1 4814 5145 +
Chr1	stalkie_big_nohaplotig	exon	121478757	121478938	99	-	.	Parent=FBgn0031077.1.mrna1;Target=FBgn0031077.1 4632 4813 +
Chr1	stalkie_big_nohaplotig	exon	121478997	121479653	99	-	.	Parent=FBgn0031077.1.mrna1;Target=FBgn0031077.1 3975 4631 +
Chr1	stalkie_big_nohaplotig	exon	121479725	121479876	100	-	.	Parent=FBgn0031077.1.mrna1;Target=FBgn0031077.1 3823 3974 +
Chr1	stalkie_big_nohaplotig	exon	121480378	121480437	100	-	.	Parent=FBgn0031077.1.mrna1;Target=FBgn0031077.1 3763 3822 +
Chr1	stalkie_big_nohaplotig	exon	121480502	121480645	96	-	.	Parent=FBgn0031077.1.mrna1;Target=FBgn0031077.1 3619 3762 +
Chr1	stalkie_big_nohaplotig	exon	121480702	121482968	99	-	.	Parent=FBgn0031077.1.mrna1;Target=FBgn0031077.1 1352 3618 +
Chr1	stalkie_big_nohaplotig	exon	121485045	121485859	99	-	.	Parent=FBgn0031077.1.mrna1;Target=FBgn0031077.1 537 1351 +
Chr1	stalkie_big_nohaplotig	exon	121485916	121486170	100	-	.	Parent=FBgn0031077.1.mrna1;Target=FBgn0031077.1 282 536 +
Chr1	stalkie_big_nohaplotig	exon	121486265	121486365	100	-	.	Parent=FBgn0031077.1.mrna1;Target=FBgn0031077.1 181 281 +
Chr1	stalkie_big_nohaplotig	exon	121486418	121486500	100	-	.	Parent=FBgn0031077.1.mrna1;Target=FBgn0031077.1 98 180 +
Chr1	stalkie_big_nohaplotig	exon	121486566	121486661	98	-	.	Parent=FBgn0031077.1.mrna1;Target=FBgn0031077.1 1 97 +
Chr1	stalkie_big_nohaplotig	CDS	121486589	121486659	.	-	0	Parent=FBgn0031077.1.mrna1
Chr1	gffcl	locus	121487698	121490661	.	+	.	ID=RLOC_00010636;geneIDs=FBgn0030720.1.path1;transcripts=FBgn0030720.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121487698	121490661	.	+	.	ID=FBgn0030720.1.mrna1;geneID=FBgn0030720.1.path1;Name=FBgn0030720.1;Dir=sensecoverage=100.0;identity=98.7;matches=2479;mismatches=15;indels=17;unknowns=0;locus=RLOC_00010636
Chr1	stalkie_big_nohaplotig	exon	121487698	121487828	87	+	.	Parent=FBgn0030720.1.mrna1;Target=FBgn0030720.1 1 148 +
Chr1	stalkie_big_nohaplotig	exon	121487894	121489172	99	+	.	Parent=FBgn0030720.1.mrna1;Target=FBgn0030720.1 149 1427 +
Chr1	stalkie_big_nohaplotig	exon	121489491	121490005	99	+	.	Parent=FBgn0030720.1.mrna1;Target=FBgn0030720.1 1428 1942 +
Chr1	stalkie_big_nohaplotig	exon	121490093	121490661	100	+	.	Parent=FBgn0030720.1.mrna1;Target=FBgn0030720.1 1943 2511 +
Chr1	stalkie_big_nohaplotig	CDS	121487762	121487828	.	+	0	Parent=FBgn0030720.1.mrna1;Target=FBgn0030720.1 82 148 +
Chr1	stalkie_big_nohaplotig	CDS	121487894	121489172	.	+	2	Parent=FBgn0030720.1.mrna1;Target=FBgn0030720.1 149 1427 +
Chr1	stalkie_big_nohaplotig	CDS	121489491	121490005	.	+	1	Parent=FBgn0030720.1.mrna1;Target=FBgn0030720.1 1428 1942 +
Chr1	stalkie_big_nohaplotig	CDS	121490093	121490661	.	+	2	Parent=FBgn0030720.1.mrna1;Target=FBgn0030720.1 1943 2511 +
Chr1	gffcl	locus	121490053	121598634	.	.	.	ID=RLOC_00010637;geneIDs=comp50325_c0_seq1.path1,comp154438_c0_seq1.path1,comp160362_c3_seq1.path1;transcripts=comp50325_c0_seq1.mrna1,comp154438_c0_seq1.mrna1,comp160362_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121490053	121598634	.	+	.	ID=comp50325_c0_seq1.mrna1;geneID=comp50325_c0_seq1.path1;Name=comp50325_c0_seq1;Dir=indeterminatecoverage=87.0;identity=84.0;matches=621;mismatches=55;indels=63;unknowns=0;locus=RLOC_00010637
Chr1	stalkie_big_nohaplotig	exon	121490053	121490054	100	+	.	Parent=comp50325_c0_seq1.mrna1;Target=comp50325_c0_seq1 120 119 .
Chr1	stalkie_big_nohaplotig	exon	121492851	121492854	100	+	.	Parent=comp50325_c0_seq1.mrna1;Target=comp50325_c0_seq1 124 121 .
Chr1	stalkie_big_nohaplotig	exon	121500421	121500430	100	+	.	Parent=comp50325_c0_seq1.mrna1;Target=comp50325_c0_seq1 134 125 .
Chr1	stalkie_big_nohaplotig	exon	121503207	121503225	54	+	.	Parent=comp50325_c0_seq1.mrna1;Target=comp50325_c0_seq1 169 135 .
Chr1	stalkie_big_nohaplotig	exon	121509825	121509835	100	+	.	Parent=comp50325_c0_seq1.mrna1;Target=comp50325_c0_seq1 248 238 .
Chr1	stalkie_big_nohaplotig	exon	121510267	121510338	50	+	.	Parent=comp50325_c0_seq1.mrna1;Target=comp50325_c0_seq1 317 249 .
Chr1	stalkie_big_nohaplotig	exon	121510830	121510833	100	+	.	Parent=comp50325_c0_seq1.mrna1;Target=comp50325_c0_seq1 321 318 .
Chr1	stalkie_big_nohaplotig	exon	121516021	121516033	100	+	.	Parent=comp50325_c0_seq1.mrna1;Target=comp50325_c0_seq1 334 322 .
Chr1	stalkie_big_nohaplotig	exon	121518203	121518204	100	+	.	Parent=comp50325_c0_seq1.mrna1;Target=comp50325_c0_seq1 336 335 .
Chr1	stalkie_big_nohaplotig	exon	121529138	121529140	100	+	.	Parent=comp50325_c0_seq1.mrna1;Target=comp50325_c0_seq1 339 337 .
Chr1	stalkie_big_nohaplotig	exon	121544616	121544627	100	+	.	Parent=comp50325_c0_seq1.mrna1;Target=comp50325_c0_seq1 351 340 .
Chr1	stalkie_big_nohaplotig	exon	121546106	121546110	60	+	.	Parent=comp50325_c0_seq1.mrna1;Target=comp50325_c0_seq1 356 352 .
Chr1	stalkie_big_nohaplotig	exon	121551156	121551216	44	+	.	Parent=comp50325_c0_seq1.mrna1;Target=comp50325_c0_seq1 408 357 .
Chr1	stalkie_big_nohaplotig	exon	121554401	121554410	100	+	.	Parent=comp50325_c0_seq1.mrna1;Target=comp50325_c0_seq1 418 409 .
Chr1	stalkie_big_nohaplotig	exon	121561355	121561360	100	+	.	Parent=comp50325_c0_seq1.mrna1;Target=comp50325_c0_seq1 424 419 .
Chr1	stalkie_big_nohaplotig	exon	121565661	121565662	100	+	.	Parent=comp50325_c0_seq1.mrna1;Target=comp50325_c0_seq1 426 425 .
Chr1	stalkie_big_nohaplotig	exon	121570130	121570148	84	+	.	Parent=comp50325_c0_seq1.mrna1;Target=comp50325_c0_seq1 445 427 .
Chr1	stalkie_big_nohaplotig	exon	121598197	121598634	94	+	.	Parent=comp50325_c0_seq1.mrna1;Target=comp50325_c0_seq1 906 446 .
Chr1	stalkie_big_nohaplotig	CDS	121490053	121490054	.	+	0	Parent=comp50325_c0_seq1.mrna1;Target=comp50325_c0_seq1 120 119 .
Chr1	stalkie_big_nohaplotig	CDS	121492851	121492854	.	+	1	Parent=comp50325_c0_seq1.mrna1;Target=comp50325_c0_seq1 124 121 .
Chr1	stalkie_big_nohaplotig	CDS	121500421	121500430	.	+	0	Parent=comp50325_c0_seq1.mrna1;Target=comp50325_c0_seq1 134 125 .
Chr1	stalkie_big_nohaplotig	CDS	121503207	121503216	.	+	2	Parent=comp50325_c0_seq1.mrna1;Target=comp50325_c0_seq1 151 135 .
Chr1	stalkie_big_nohaplotig	mRNA	121518005	121519298	.	-	.	ID=comp154438_c0_seq1.mrna1;geneID=comp154438_c0_seq1.path1;Name=comp154438_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1288;mismatches=6;indels=0;unknowns=0;Target=comp154438_c0_seq1 1294 1 .;CDS_Target=comp154438_c0_seq1 1294 1136 .;locus=RLOC_00010637
Chr1	stalkie_big_nohaplotig	exon	121518005	121519298	99	-	.	Parent=comp154438_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121518005	121518163	.	-	0	Parent=comp154438_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121565361	121590855	.	+	.	ID=comp160362_c3_seq1.mrna1;geneID=comp160362_c3_seq1.path1;Name=comp160362_c3_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=2776;mismatches=9;indels=0;unknowns=0;locus=RLOC_00010637
Chr1	stalkie_big_nohaplotig	exon	121565361	121566137	99	+	.	Parent=comp160362_c3_seq1.mrna1;Target=comp160362_c3_seq1 2009 2785 -
Chr1	stalkie_big_nohaplotig	exon	121588191	121590022	99	+	.	Parent=comp160362_c3_seq1.mrna1;Target=comp160362_c3_seq1 177 2008 -
Chr1	stalkie_big_nohaplotig	exon	121590617	121590698	100	+	.	Parent=comp160362_c3_seq1.mrna1;Target=comp160362_c3_seq1 95 176 -
Chr1	stalkie_big_nohaplotig	exon	121590762	121590855	98	+	.	Parent=comp160362_c3_seq1.mrna1;Target=comp160362_c3_seq1 1 94 -
Chr1	stalkie_big_nohaplotig	CDS	121588192	121590022	.	+	0	Parent=comp160362_c3_seq1.mrna1;Target=comp160362_c3_seq1 177 2007 .
Chr1	stalkie_big_nohaplotig	CDS	121590617	121590698	.	+	2	Parent=comp160362_c3_seq1.mrna1;Target=comp160362_c3_seq1 95 176 .
Chr1	stalkie_big_nohaplotig	CDS	121590762	121590855	.	+	1	Parent=comp160362_c3_seq1.mrna1;Target=comp160362_c3_seq1 1 94 .
Chr1	gffcl	locus	121491014	121495299	.	-	.	ID=RLOC_00010638;geneIDs=FBgn0030717.1.path1;transcripts=FBgn0030717.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121491014	121495299	.	-	.	ID=FBgn0030717.1.mrna1;geneID=FBgn0030717.1.path1;Name=FBgn0030717.1;Dir=sensecoverage=100.0;identity=99.6;matches=1407;mismatches=6;indels=0;unknowns=0;locus=RLOC_00010638
Chr1	stalkie_big_nohaplotig	exon	121491014	121491572	100	-	.	Parent=FBgn0030717.1.mrna1;Target=FBgn0030717.1 855 1413 +
Chr1	stalkie_big_nohaplotig	exon	121491630	121491845	99	-	.	Parent=FBgn0030717.1.mrna1;Target=FBgn0030717.1 639 854 +
Chr1	stalkie_big_nohaplotig	exon	121492783	121492839	98	-	.	Parent=FBgn0030717.1.mrna1;Target=FBgn0030717.1 582 638 +
Chr1	stalkie_big_nohaplotig	exon	121492902	121493060	100	-	.	Parent=FBgn0030717.1.mrna1;Target=FBgn0030717.1 423 581 +
Chr1	stalkie_big_nohaplotig	exon	121493124	121493247	99	-	.	Parent=FBgn0030717.1.mrna1;Target=FBgn0030717.1 299 422 +
Chr1	stalkie_big_nohaplotig	exon	121493709	121493863	100	-	.	Parent=FBgn0030717.1.mrna1;Target=FBgn0030717.1 144 298 +
Chr1	stalkie_big_nohaplotig	exon	121495088	121495204	98	-	.	Parent=FBgn0030717.1.mrna1;Target=FBgn0030717.1 27 143 +
Chr1	stalkie_big_nohaplotig	exon	121495274	121495299	96	-	.	Parent=FBgn0030717.1.mrna1;Target=FBgn0030717.1 1 26 +
Chr1	stalkie_big_nohaplotig	CDS	121491014	121491572	.	-	1	Parent=FBgn0030717.1.mrna1;Target=FBgn0030717.1 855 1413 +
Chr1	stalkie_big_nohaplotig	CDS	121491630	121491845	.	-	1	Parent=FBgn0030717.1.mrna1;Target=FBgn0030717.1 639 854 +
Chr1	stalkie_big_nohaplotig	CDS	121492783	121492839	.	-	1	Parent=FBgn0030717.1.mrna1;Target=FBgn0030717.1 582 638 +
Chr1	stalkie_big_nohaplotig	CDS	121492902	121493060	.	-	1	Parent=FBgn0030717.1.mrna1;Target=FBgn0030717.1 423 581 +
Chr1	stalkie_big_nohaplotig	CDS	121493124	121493247	.	-	2	Parent=FBgn0030717.1.mrna1;Target=FBgn0030717.1 299 422 +
Chr1	stalkie_big_nohaplotig	CDS	121493709	121493863	.	-	1	Parent=FBgn0030717.1.mrna1;Target=FBgn0030717.1 144 298 +
Chr1	stalkie_big_nohaplotig	CDS	121495088	121495204	.	-	1	Parent=FBgn0030717.1.mrna1;Target=FBgn0030717.1 27 143 +
Chr1	stalkie_big_nohaplotig	CDS	121495274	121495299	.	-	0	Parent=FBgn0030717.1.mrna1;Target=FBgn0030717.1 1 26 +
Chr1	gffcl	locus	121495706	121497077	.	+	.	ID=RLOC_00010639;geneIDs=FBgn0030686.1.path1;transcripts=FBgn0030686.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121495706	121497077	.	+	.	ID=FBgn0030686.1.mrna1;geneID=FBgn0030686.1.path1;Name=FBgn0030686.1;Dir=sensecoverage=100.0;identity=99.7;matches=1179;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010639
Chr1	stalkie_big_nohaplotig	exon	121495706	121495818	100	+	.	Parent=FBgn0030686.1.mrna1;Target=FBgn0030686.1 1 113 +
Chr1	stalkie_big_nohaplotig	exon	121495905	121496001	98	+	.	Parent=FBgn0030686.1.mrna1;Target=FBgn0030686.1 114 210 +
Chr1	stalkie_big_nohaplotig	exon	121496052	121496596	99	+	.	Parent=FBgn0030686.1.mrna1;Target=FBgn0030686.1 211 755 +
Chr1	stalkie_big_nohaplotig	exon	121496651	121497077	100	+	.	Parent=FBgn0030686.1.mrna1;Target=FBgn0030686.1 756 1182 +
Chr1	stalkie_big_nohaplotig	CDS	121495706	121495818	.	+	0	Parent=FBgn0030686.1.mrna1;Target=FBgn0030686.1 1 113 +
Chr1	stalkie_big_nohaplotig	CDS	121495905	121496001	.	+	1	Parent=FBgn0030686.1.mrna1;Target=FBgn0030686.1 114 210 +
Chr1	stalkie_big_nohaplotig	CDS	121496052	121496596	.	+	0	Parent=FBgn0030686.1.mrna1;Target=FBgn0030686.1 211 755 +
Chr1	stalkie_big_nohaplotig	CDS	121496651	121497077	.	+	1	Parent=FBgn0030686.1.mrna1;Target=FBgn0030686.1 756 1182 +
Chr1	gffcl	locus	121497282	121498547	.	-	.	ID=RLOC_00010640;geneIDs=FBgn0031987.1.path1;transcripts=FBgn0031987.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121497282	121498547	.	-	.	ID=FBgn0031987.1.mrna1;geneID=FBgn0031987.1.path1;Name=FBgn0031987.1;Dir=sensecoverage=100.0;identity=99.8;matches=922;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010640
Chr1	stalkie_big_nohaplotig	exon	121497282	121497548	99	-	.	Parent=FBgn0031987.1.mrna1;Target=FBgn0031987.1 658 924 +
Chr1	stalkie_big_nohaplotig	exon	121497613	121497722	100	-	.	Parent=FBgn0031987.1.mrna1;Target=FBgn0031987.1 548 657 +
Chr1	stalkie_big_nohaplotig	exon	121497777	121498001	100	-	.	Parent=FBgn0031987.1.mrna1;Target=FBgn0031987.1 323 547 +
Chr1	stalkie_big_nohaplotig	exon	121498172	121498338	100	-	.	Parent=FBgn0031987.1.mrna1;Target=FBgn0031987.1 156 322 +
Chr1	stalkie_big_nohaplotig	exon	121498393	121498547	99	-	.	Parent=FBgn0031987.1.mrna1;Target=FBgn0031987.1 1 155 +
Chr1	stalkie_big_nohaplotig	CDS	121497282	121497548	.	-	0	Parent=FBgn0031987.1.mrna1;Target=FBgn0031987.1 658 924 +
Chr1	stalkie_big_nohaplotig	CDS	121497613	121497722	.	-	2	Parent=FBgn0031987.1.mrna1;Target=FBgn0031987.1 548 657 +
Chr1	stalkie_big_nohaplotig	CDS	121497777	121498001	.	-	2	Parent=FBgn0031987.1.mrna1;Target=FBgn0031987.1 323 547 +
Chr1	stalkie_big_nohaplotig	CDS	121498172	121498338	.	-	1	Parent=FBgn0031987.1.mrna1;Target=FBgn0031987.1 156 322 +
Chr1	stalkie_big_nohaplotig	CDS	121498393	121498547	.	-	0	Parent=FBgn0031987.1.mrna1;Target=FBgn0031987.1 1 155 +
Chr1	gffcl	locus	121501293	121504337	.	+	.	ID=RLOC_00010641;geneIDs=FBgn0030672.1.path1;transcripts=FBgn0030672.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121501293	121504337	.	+	.	ID=FBgn0030672.1.mrna1;geneID=FBgn0030672.1.path1;Name=FBgn0030672.1;Dir=sensecoverage=100.0;identity=99.5;matches=1839;mismatches=9;indels=0;unknowns=0;locus=RLOC_00010641
Chr1	stalkie_big_nohaplotig	exon	121501293	121501977	99	+	.	Parent=FBgn0030672.1.mrna1;Target=FBgn0030672.1 1 685 +
Chr1	stalkie_big_nohaplotig	exon	121502060	121502565	100	+	.	Parent=FBgn0030672.1.mrna1;Target=FBgn0030672.1 686 1191 +
Chr1	stalkie_big_nohaplotig	exon	121502627	121503163	98	+	.	Parent=FBgn0030672.1.mrna1;Target=FBgn0030672.1 1192 1728 +
Chr1	stalkie_big_nohaplotig	exon	121504218	121504337	100	+	.	Parent=FBgn0030672.1.mrna1;Target=FBgn0030672.1 1729 1848 +
Chr1	stalkie_big_nohaplotig	CDS	121501293	121501977	.	+	0	Parent=FBgn0030672.1.mrna1;Target=FBgn0030672.1 1 685 +
Chr1	stalkie_big_nohaplotig	CDS	121502060	121502565	.	+	2	Parent=FBgn0030672.1.mrna1;Target=FBgn0030672.1 686 1191 +
Chr1	stalkie_big_nohaplotig	CDS	121502627	121503163	.	+	0	Parent=FBgn0030672.1.mrna1;Target=FBgn0030672.1 1192 1728 +
Chr1	stalkie_big_nohaplotig	CDS	121504218	121504337	.	+	0	Parent=FBgn0030672.1.mrna1;Target=FBgn0030672.1 1729 1848 +
Chr1	gffcl	locus	121505198	121506281	.	-	.	ID=RLOC_00010642;geneIDs=FBgn0030671.1.path1;transcripts=FBgn0030671.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121505198	121506281	.	-	.	ID=FBgn0030671.1.mrna1;geneID=FBgn0030671.1.path1;Name=FBgn0030671.1;Dir=sensecoverage=100.0;identity=99.9;matches=968;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010642
Chr1	stalkie_big_nohaplotig	exon	121505198	121505542	100	-	.	Parent=FBgn0030671.1.mrna1;Target=FBgn0030671.1 625 969 +
Chr1	stalkie_big_nohaplotig	exon	121505603	121506089	99	-	.	Parent=FBgn0030671.1.mrna1;Target=FBgn0030671.1 138 624 +
Chr1	stalkie_big_nohaplotig	exon	121506145	121506281	100	-	.	Parent=FBgn0030671.1.mrna1;Target=FBgn0030671.1 1 137 +
Chr1	stalkie_big_nohaplotig	CDS	121505198	121505542	.	-	0	Parent=FBgn0030671.1.mrna1;Target=FBgn0030671.1 625 969 +
Chr1	stalkie_big_nohaplotig	CDS	121505603	121506089	.	-	1	Parent=FBgn0030671.1.mrna1;Target=FBgn0030671.1 138 624 +
Chr1	stalkie_big_nohaplotig	CDS	121506145	121506281	.	-	0	Parent=FBgn0030671.1.mrna1;Target=FBgn0030671.1 1 137 +
Chr1	gffcl	locus	121508258	121510380	.	-	.	ID=RLOC_00010643;geneIDs=FBgn0027329.1.path1;transcripts=FBgn0027329.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121508258	121510380	.	-	.	ID=FBgn0027329.1.mrna1;geneID=FBgn0027329.1.path1;Name=FBgn0027329.1;Dir=sensecoverage=100.0;identity=99.4;matches=1604;mismatches=10;indels=0;unknowns=0;locus=RLOC_00010643
Chr1	stalkie_big_nohaplotig	exon	121508258	121509713	99	-	.	Parent=FBgn0027329.1.mrna1;Target=FBgn0027329.1 159 1614 +
Chr1	stalkie_big_nohaplotig	exon	121510223	121510380	100	-	.	Parent=FBgn0027329.1.mrna1;Target=FBgn0027329.1 1 158 +
Chr1	stalkie_big_nohaplotig	CDS	121508258	121509713	.	-	1	Parent=FBgn0027329.1.mrna1;Target=FBgn0027329.1 159 1614 +
Chr1	stalkie_big_nohaplotig	CDS	121510223	121510380	.	-	0	Parent=FBgn0027329.1.mrna1;Target=FBgn0027329.1 1 158 +
Chr1	gffcl	locus	121512265	121513191	.	-	.	ID=RLOC_00010644;geneIDs=FBgn0030669.1.path1;transcripts=FBgn0030669.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121512265	121513191	.	-	.	ID=FBgn0030669.1.mrna1;geneID=FBgn0030669.1.path1;Name=FBgn0030669.1;Dir=sensecoverage=100.0;identity=98.5;matches=529;mismatches=3;indels=5;unknowns=0;locus=RLOC_00010644
Chr1	stalkie_big_nohaplotig	exon	121512265	121512636	99	-	.	Parent=FBgn0030669.1.mrna1;Target=FBgn0030669.1 166 537 +
Chr1	stalkie_big_nohaplotig	exon	121513032	121513191	96	-	.	Parent=FBgn0030669.1.mrna1;Target=FBgn0030669.1 1 165 +
Chr1	stalkie_big_nohaplotig	CDS	121512265	121512636	.	-	0	Parent=FBgn0030669.1.mrna1;Target=FBgn0030669.1 166 537 +
Chr1	stalkie_big_nohaplotig	CDS	121513032	121513124	.	-	0	Parent=FBgn0030669.1.mrna1;Target=FBgn0030669.1 73 165 +
Chr1	gffcl	locus	121513930	121516142	.	-	.	ID=RLOC_00010645;geneIDs=FBgn0030670.1.path1;transcripts=FBgn0030670.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121513930	121516142	.	-	.	ID=FBgn0030670.1.mrna1;geneID=FBgn0030670.1.path1;Name=FBgn0030670.1;Dir=sensecoverage=98.2;identity=100.0;matches=701;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010645
Chr1	stalkie_big_nohaplotig	exon	121513930	121514092	100	-	.	Parent=FBgn0030670.1.mrna1;Target=FBgn0030670.1 539 701 +
Chr1	stalkie_big_nohaplotig	exon	121514159	121514319	100	-	.	Parent=FBgn0030670.1.mrna1;Target=FBgn0030670.1 378 538 +
Chr1	stalkie_big_nohaplotig	exon	121514413	121514566	100	-	.	Parent=FBgn0030670.1.mrna1;Target=FBgn0030670.1 224 377 +
Chr1	stalkie_big_nohaplotig	exon	121515704	121515838	100	-	.	Parent=FBgn0030670.1.mrna1;Target=FBgn0030670.1 89 223 +
Chr1	stalkie_big_nohaplotig	exon	121516055	121516142	100	-	.	Parent=FBgn0030670.1.mrna1;Target=FBgn0030670.1 1 88 +
Chr1	stalkie_big_nohaplotig	CDS	121513932	121514092	.	-	2	Parent=FBgn0030670.1.mrna1;Target=FBgn0030670.1 539 699 +
Chr1	stalkie_big_nohaplotig	CDS	121514159	121514319	.	-	1	Parent=FBgn0030670.1.mrna1;Target=FBgn0030670.1 378 538 +
Chr1	stalkie_big_nohaplotig	CDS	121514413	121514566	.	-	2	Parent=FBgn0030670.1.mrna1;Target=FBgn0030670.1 224 377 +
Chr1	stalkie_big_nohaplotig	CDS	121515704	121515838	.	-	2	Parent=FBgn0030670.1.mrna1;Target=FBgn0030670.1 89 223 +
Chr1	stalkie_big_nohaplotig	CDS	121516055	121516142	.	-	0	Parent=FBgn0030670.1.mrna1;Target=FBgn0030670.1 1 88 +
Chr1	gffcl	locus	121535456	121541881	.	+	.	ID=RLOC_00010646;geneIDs=comp161992_c0_seq1.path1;transcripts=comp161992_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121535456	121541881	.	+	.	ID=comp161992_c0_seq1.mrna1;geneID=comp161992_c0_seq1.path1;Name=comp161992_c0_seq1;Dir=sensecoverage=99.4;identity=99.8;matches=5203;mismatches=9;indels=0;unknowns=0;locus=RLOC_00010646
Chr1	stalkie_big_nohaplotig	exon	121535456	121535558	100	+	.	Parent=comp161992_c0_seq1.mrna1;Target=comp161992_c0_seq1 34 136 +
Chr1	stalkie_big_nohaplotig	exon	121535789	121535902	100	+	.	Parent=comp161992_c0_seq1.mrna1;Target=comp161992_c0_seq1 137 250 +
Chr1	stalkie_big_nohaplotig	exon	121536139	121536729	99	+	.	Parent=comp161992_c0_seq1.mrna1;Target=comp161992_c0_seq1 251 841 +
Chr1	stalkie_big_nohaplotig	exon	121536792	121537046	100	+	.	Parent=comp161992_c0_seq1.mrna1;Target=comp161992_c0_seq1 842 1096 +
Chr1	stalkie_big_nohaplotig	exon	121537100	121540823	99	+	.	Parent=comp161992_c0_seq1.mrna1;Target=comp161992_c0_seq1 1097 4820 +
Chr1	stalkie_big_nohaplotig	exon	121541457	121541881	100	+	.	Parent=comp161992_c0_seq1.mrna1;Target=comp161992_c0_seq1 4821 5245 +
Chr1	stalkie_big_nohaplotig	CDS	121536463	121536729	.	+	0	Parent=comp161992_c0_seq1.mrna1;Target=comp161992_c0_seq1 575 841 +
Chr1	stalkie_big_nohaplotig	CDS	121536792	121537046	.	+	0	Parent=comp161992_c0_seq1.mrna1;Target=comp161992_c0_seq1 842 1096 +
Chr1	stalkie_big_nohaplotig	CDS	121537100	121540823	.	+	0	Parent=comp161992_c0_seq1.mrna1;Target=comp161992_c0_seq1 1097 4820 +
Chr1	stalkie_big_nohaplotig	CDS	121541457	121541509	.	+	2	Parent=comp161992_c0_seq1.mrna1;Target=comp161992_c0_seq1 4821 4873 +
Chr1	gffcl	locus	121544043	121544608	.	+	.	ID=RLOC_00010647;geneIDs=comp142543_c0_seq1.path1;transcripts=comp142543_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121544043	121544608	.	+	.	ID=comp142543_c0_seq1.mrna1;geneID=comp142543_c0_seq1.path1;Name=comp142543_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=564;mismatches=2;indels=0;unknowns=0;Target=comp142543_c0_seq1 566 1 .;CDS_Target=comp142543_c0_seq1 187 104 .;locus=RLOC_00010647
Chr1	stalkie_big_nohaplotig	exon	121544043	121544608	99	+	.	Parent=comp142543_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121544146	121544229	.	+	0	Parent=comp142543_c0_seq1.mrna1
Chr1	gffcl	locus	121546502	121546707	.	+	.	ID=RLOC_00010648;geneIDs=comp134728_c0_seq1.path1;transcripts=comp134728_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121546502	121546707	.	+	.	ID=comp134728_c0_seq1.mrna1;geneID=comp134728_c0_seq1.path1;Name=comp134728_c0_seq1;Dir=indeterminatecoverage=96.3;identity=100.0;matches=206;mismatches=0;indels=0;unknowns=0;Target=comp134728_c0_seq1 214 9 .;CDS_Target=comp134728_c0_seq1 200 93 .;locus=RLOC_00010648
Chr1	stalkie_big_nohaplotig	exon	121546502	121546707	100	+	.	Parent=comp134728_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121546586	121546693	.	+	0	Parent=comp134728_c0_seq1.mrna1
Chr1	gffcl	locus	121547744	121551050	.	-	.	ID=RLOC_00010649;geneIDs=FBgn0027794.1.path1;transcripts=FBgn0027794.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121547744	121551050	.	-	.	ID=FBgn0027794.1.mrna1;geneID=FBgn0027794.1.path1;Name=FBgn0027794.1;Dir=sensecoverage=100.0;identity=99.9;matches=3191;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010649
Chr1	stalkie_big_nohaplotig	exon	121547744	121548651	99	-	.	Parent=FBgn0027794.1.mrna1;Target=FBgn0027794.1 2288 3195 +
Chr1	stalkie_big_nohaplotig	exon	121548713	121549956	99	-	.	Parent=FBgn0027794.1.mrna1;Target=FBgn0027794.1 1044 2287 +
Chr1	stalkie_big_nohaplotig	exon	121550008	121551050	99	-	.	Parent=FBgn0027794.1.mrna1;Target=FBgn0027794.1 1 1043 +
Chr1	stalkie_big_nohaplotig	CDS	121547744	121548651	.	-	2	Parent=FBgn0027794.1.mrna1;Target=FBgn0027794.1 2288 3195 +
Chr1	stalkie_big_nohaplotig	CDS	121548713	121549956	.	-	1	Parent=FBgn0027794.1.mrna1;Target=FBgn0027794.1 1044 2287 +
Chr1	stalkie_big_nohaplotig	CDS	121550008	121551050	.	-	0	Parent=FBgn0027794.1.mrna1;Target=FBgn0027794.1 1 1043 +
Chr1	gffcl	locus	121592783	121602175	.	+	.	ID=RLOC_00010650;geneIDs=comp136850_c0_seq1.path1;transcripts=comp136850_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121592783	121602175	.	+	.	ID=comp136850_c0_seq1.mrna1;geneID=comp136850_c0_seq1.path1;Name=comp136850_c0_seq1;Dir=sensecoverage=100.0;identity=98.2;matches=373;mismatches=7;indels=0;unknowns=0;locus=RLOC_00010650
Chr1	stalkie_big_nohaplotig	exon	121592783	121592805	100	+	.	Parent=comp136850_c0_seq1.mrna1;Target=comp136850_c0_seq1 1 23 +
Chr1	stalkie_big_nohaplotig	exon	121601765	121601881	97	+	.	Parent=comp136850_c0_seq1.mrna1;Target=comp136850_c0_seq1 24 140 +
Chr1	stalkie_big_nohaplotig	exon	121601936	121602175	98	+	.	Parent=comp136850_c0_seq1.mrna1;Target=comp136850_c0_seq1 141 380 +
Chr1	stalkie_big_nohaplotig	CDS	121592784	121592805	.	+	0	Parent=comp136850_c0_seq1.mrna1;Target=comp136850_c0_seq1 2 23 +
Chr1	stalkie_big_nohaplotig	CDS	121601765	121601820	.	+	2	Parent=comp136850_c0_seq1.mrna1;Target=comp136850_c0_seq1 24 79 +
Chr1	gffcl	locus	121597710	121598192	.	+	.	ID=RLOC_00010651;geneIDs=comp118244_c0_seq1.path1;transcripts=comp118244_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121597710	121598192	.	+	.	ID=comp118244_c0_seq1.mrna1;geneID=comp118244_c0_seq1.path1;Name=comp118244_c0_seq1;Dir=indeterminatecoverage=96.8;identity=99.6;matches=481;mismatches=2;indels=0;unknowns=0;Target=comp118244_c0_seq1 483 1 .;CDS_Target=comp118244_c0_seq1 483 433 .;locus=RLOC_00010651
Chr1	stalkie_big_nohaplotig	exon	121597710	121598192	99	+	.	Parent=comp118244_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121598142	121598192	.	+	0	Parent=comp118244_c0_seq1.mrna1
Chr1	gffcl	locus	121598864	121599079	.	+	.	ID=RLOC_00010652;geneIDs=comp110889_c0_seq1.path1;transcripts=comp110889_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121598864	121599079	.	+	.	ID=comp110889_c0_seq1.mrna1;geneID=comp110889_c0_seq1.path1;Name=comp110889_c0_seq1;Dir=indeterminatecoverage=96.0;identity=100.0;matches=216;mismatches=0;indels=0;unknowns=0;Target=comp110889_c0_seq1 225 10 .;CDS_Target=comp110889_c0_seq1 78 16 .;locus=RLOC_00010652
Chr1	stalkie_big_nohaplotig	exon	121598864	121599079	100	+	.	Parent=comp110889_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121598870	121598932	.	+	0	Parent=comp110889_c0_seq1.mrna1
Chr1	gffcl	locus	121614868	121615259	.	+	.	ID=RLOC_00010653;geneIDs=comp1689297_c0_seq1.path1;transcripts=comp1689297_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121614868	121615259	.	+	.	ID=comp1689297_c0_seq1.mrna1;geneID=comp1689297_c0_seq1.path1;Name=comp1689297_c0_seq1;Dir=indeterminatecoverage=95.8;identity=99.7;matches=391;mismatches=1;indels=0;unknowns=0;Target=comp1689297_c0_seq1 409 18 .;CDS_Target=comp1689297_c0_seq1 22 20 .;locus=RLOC_00010653
Chr1	stalkie_big_nohaplotig	exon	121614868	121615259	99	+	.	Parent=comp1689297_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121614870	121614872	.	+	0	Parent=comp1689297_c0_seq1.mrna1
Chr1	gffcl	locus	121673372	121673607	.	+	.	ID=RLOC_00010655;geneIDs=comp141819_c0_seq1.path1;transcripts=comp141819_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121673372	121673607	.	+	.	ID=comp141819_c0_seq1.mrna1;geneID=comp141819_c0_seq1.path1;Name=comp141819_c0_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=236;mismatches=0;indels=0;unknowns=0;Target=comp141819_c0_seq1 237 2 .;CDS_Target=comp141819_c0_seq1 95 3 .;locus=RLOC_00010655
Chr1	stalkie_big_nohaplotig	exon	121673372	121673607	100	+	.	Parent=comp141819_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121673373	121673465	.	+	0	Parent=comp141819_c0_seq1.mrna1
Chr1	gffcl	locus	121673723	121677566	.	+	.	ID=RLOC_00010656;geneIDs=comp153597_c0_seq1.path1,comp159533_c0_seq1.path1;transcripts=comp159533_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121674926	121677566	.	+	.	ID=comp159533_c0_seq1.mrna1;geneID=comp159533_c0_seq1.path1;Name=comp159533_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.8;matches=2612;mismatches=25;indels=7;unknowns=0;Target=comp159533_c0_seq1 2647 8 .;CDS_Target=comp159533_c0_seq1 1245 1078 .;locus=RLOC_00010656
Chr1	stalkie_big_nohaplotig	exon	121674926	121677566	98	+	.	Parent=comp159533_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121675998	121676165	.	+	0	Parent=comp159533_c0_seq1.mrna1
Chr1	gffcl	locus	121688292	121688736	.	+	.	ID=RLOC_00010657;geneIDs=FBgn0052230.2.path1;transcripts=FBgn0052230.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121688292	121688736	.	+	.	ID=FBgn0052230.2.mrna1;geneID=FBgn0052230.2.path1;Name=FBgn0052230.2;Dir=sensecoverage=100.0;identity=99.7;matches=311;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010657
Chr1	stalkie_big_nohaplotig	exon	121688292	121688375	98	+	.	Parent=FBgn0052230.2.mrna1;Target=FBgn0052230.2 1 84 +
Chr1	stalkie_big_nohaplotig	exon	121688446	121688592	100	+	.	Parent=FBgn0052230.2.mrna1;Target=FBgn0052230.2 85 231 +
Chr1	stalkie_big_nohaplotig	exon	121688656	121688736	100	+	.	Parent=FBgn0052230.2.mrna1;Target=FBgn0052230.2 232 312 +
Chr1	stalkie_big_nohaplotig	CDS	121688292	121688375	.	+	0	Parent=FBgn0052230.2.mrna1;Target=FBgn0052230.2 1 84 +
Chr1	stalkie_big_nohaplotig	CDS	121688446	121688592	.	+	0	Parent=FBgn0052230.2.mrna1;Target=FBgn0052230.2 85 231 +
Chr1	stalkie_big_nohaplotig	CDS	121688656	121688736	.	+	0	Parent=FBgn0052230.2.mrna1;Target=FBgn0052230.2 232 312 +
Chr1	gffcl	locus	121745933	121751461	.	+	.	ID=RLOC_00010658;geneIDs=FBgn0261930.1.path1;transcripts=FBgn0261930.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121745933	121751461	.	+	.	ID=FBgn0261930.1.mrna1;geneID=FBgn0261930.1.path1;Name=FBgn0261930.1;Dir=sensecoverage=91.6;identity=99.1;matches=1386;mismatches=13;indels=0;unknowns=0;locus=RLOC_00010658
Chr1	stalkie_big_nohaplotig	exon	121745933	121746498	99	+	.	Parent=FBgn0261930.1.mrna1;Target=FBgn0261930.1 129 694 +
Chr1	stalkie_big_nohaplotig	exon	121750629	121751461	98	+	.	Parent=FBgn0261930.1.mrna1;Target=FBgn0261930.1 695 1527 +
Chr1	stalkie_big_nohaplotig	CDS	121745934	121746498	.	+	0	Parent=FBgn0261930.1.mrna1;Target=FBgn0261930.1 130 694 +
Chr1	stalkie_big_nohaplotig	CDS	121750629	121751461	.	+	2	Parent=FBgn0261930.1.mrna1;Target=FBgn0261930.1 695 1527 +
Chr1	gffcl	locus	121787743	121788018	.	+	.	ID=RLOC_00010659;geneIDs=comp1057522_c0_seq1.path1;transcripts=comp1057522_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121787743	121788018	.	+	.	ID=comp1057522_c0_seq1.mrna1;geneID=comp1057522_c0_seq1.path1;Name=comp1057522_c0_seq1;Dir=indeterminatecoverage=95.2;identity=99.6;matches=276;mismatches=0;indels=1;unknowns=0;Target=comp1057522_c0_seq1 277 1 .;CDS_Target=comp1057522_c0_seq1 79 2 .;locus=RLOC_00010659
Chr1	stalkie_big_nohaplotig	exon	121787743	121788018	99	+	.	Parent=comp1057522_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121787744	121787821	.	+	0	Parent=comp1057522_c0_seq1.mrna1
Chr1	gffcl	locus	121802310	121803072	.	-	.	ID=RLOC_00010660;geneIDs=comp150060_c0_seq1.path1;transcripts=comp150060_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121802310	121803072	.	-	.	ID=comp150060_c0_seq1.mrna1;geneID=comp150060_c0_seq1.path1;Name=comp150060_c0_seq1;Dir=antisensecoverage=99.9;identity=95.5;matches=677;mismatches=15;indels=17;unknowns=0;Target=comp150060_c0_seq1 534 614 .;locus=RLOC_00010660
Chr1	stalkie_big_nohaplotig	exon	121802310	121802709	97	-	.	Parent=comp150060_c0_seq1.mrna1;Target=comp150060_c0_seq1 2 401 -
Chr1	stalkie_big_nohaplotig	exon	121802764	121803072	92	-	.	Parent=comp150060_c0_seq1.mrna1;Target=comp150060_c0_seq1 402 693 -
Chr1	stalkie_big_nohaplotig	CDS	121802896	121802993	.	-	0	Parent=comp150060_c0_seq1.mrna1
Chr1	gffcl	locus	121855233	121855716	.	-	.	ID=RLOC_00010662;geneIDs=comp142278_c0_seq1.path1;transcripts=comp142278_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121855233	121855716	.	-	.	ID=comp142278_c0_seq1.mrna1;geneID=comp142278_c0_seq1.path1;Name=comp142278_c0_seq1;Dir=indeterminatecoverage=99.8;identity=92.5;matches=470;mismatches=14;indels=24;unknowns=0;Target=comp142278_c0_seq1 509 2 .;CDS_Target=comp142278_c0_seq1 275 210 .;locus=RLOC_00010662
Chr1	stalkie_big_nohaplotig	exon	121855233	121855716	92	-	.	Parent=comp142278_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121855459	121855521	.	-	0	Parent=comp142278_c0_seq1.mrna1
Chr1	gffcl	locus	121868284	121869050	.	-	.	ID=RLOC_00010663;geneIDs=FBgn0030323.1.path1;transcripts=FBgn0030323.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121868284	121869050	.	-	.	ID=FBgn0030323.1.mrna1;geneID=FBgn0030323.1.path1;Name=FBgn0030323.1;Dir=sensecoverage=100.0;identity=100.0;matches=699;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010663
Chr1	stalkie_big_nohaplotig	exon	121868284	121868896	100	-	.	Parent=FBgn0030323.1.mrna1;Target=FBgn0030323.1 87 699 +
Chr1	stalkie_big_nohaplotig	exon	121868965	121869050	100	-	.	Parent=FBgn0030323.1.mrna1;Target=FBgn0030323.1 1 86 +
Chr1	stalkie_big_nohaplotig	CDS	121868284	121868896	.	-	1	Parent=FBgn0030323.1.mrna1;Target=FBgn0030323.1 87 699 +
Chr1	stalkie_big_nohaplotig	CDS	121868965	121869050	.	-	0	Parent=FBgn0030323.1.mrna1;Target=FBgn0030323.1 1 86 +
Chr1	gffcl	locus	121870119	121872690	.	+	.	ID=RLOC_00010664;geneIDs=FBgn0024983.1.path1;transcripts=FBgn0024983.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121870119	121872690	.	+	.	ID=FBgn0024983.1.mrna1;geneID=FBgn0024983.1.path1;Name=FBgn0024983.1;Dir=sensecoverage=100.0;identity=99.9;matches=1220;mismatches=0;indels=1;unknowns=0;Target=FBgn0024983.1 3 32 +;locus=RLOC_00010664
Chr1	stalkie_big_nohaplotig	exon	121870119	121870196	98	+	.	Parent=FBgn0024983.1.mrna1;Target=FBgn0024983.1 1 79 +
Chr1	stalkie_big_nohaplotig	exon	121870264	121870419	100	+	.	Parent=FBgn0024983.1.mrna1;Target=FBgn0024983.1 80 235 +
Chr1	stalkie_big_nohaplotig	exon	121871560	121871852	100	+	.	Parent=FBgn0024983.1.mrna1;Target=FBgn0024983.1 236 528 +
Chr1	stalkie_big_nohaplotig	exon	121871923	121872220	100	+	.	Parent=FBgn0024983.1.mrna1;Target=FBgn0024983.1 529 826 +
Chr1	stalkie_big_nohaplotig	exon	121872296	121872690	100	+	.	Parent=FBgn0024983.1.mrna1;Target=FBgn0024983.1 827 1221 +
Chr1	stalkie_big_nohaplotig	CDS	121870121	121870149	.	+	0	Parent=FBgn0024983.1.mrna1
Chr1	gffcl	locus	121872791	121902507	.	-	.	ID=RLOC_00010665;geneIDs=FBgn0023535.1.path1;transcripts=FBgn0023535.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121872791	121902507	.	-	.	ID=FBgn0023535.1.mrna1;geneID=FBgn0023535.1.path1;Name=FBgn0023535.1;Dir=sensecoverage=100.0;identity=99.9;matches=1070;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010665
Chr1	stalkie_big_nohaplotig	exon	121872791	121873147	100	-	.	Parent=FBgn0023535.1.mrna1;Target=FBgn0023535.1 715 1071 +
Chr1	stalkie_big_nohaplotig	exon	121875496	121875595	100	-	.	Parent=FBgn0023535.1.mrna1;Target=FBgn0023535.1 615 714 +
Chr1	stalkie_big_nohaplotig	exon	121901745	121901931	100	-	.	Parent=FBgn0023535.1.mrna1;Target=FBgn0023535.1 428 614 +
Chr1	stalkie_big_nohaplotig	exon	121901988	121902179	100	-	.	Parent=FBgn0023535.1.mrna1;Target=FBgn0023535.1 236 427 +
Chr1	stalkie_big_nohaplotig	exon	121902273	121902507	99	-	.	Parent=FBgn0023535.1.mrna1;Target=FBgn0023535.1 1 235 +
Chr1	stalkie_big_nohaplotig	CDS	121872791	121873147	.	-	0	Parent=FBgn0023535.1.mrna1;Target=FBgn0023535.1 715 1071 +
Chr1	stalkie_big_nohaplotig	CDS	121875496	121875595	.	-	1	Parent=FBgn0023535.1.mrna1;Target=FBgn0023535.1 615 714 +
Chr1	stalkie_big_nohaplotig	CDS	121901745	121901931	.	-	2	Parent=FBgn0023535.1.mrna1;Target=FBgn0023535.1 428 614 +
Chr1	stalkie_big_nohaplotig	CDS	121901988	121902179	.	-	2	Parent=FBgn0023535.1.mrna1;Target=FBgn0023535.1 236 427 +
Chr1	stalkie_big_nohaplotig	CDS	121902273	121902507	.	-	0	Parent=FBgn0023535.1.mrna1;Target=FBgn0023535.1 1 235 +
Chr1	gffcl	locus	121873359	121874178	.	-	.	ID=RLOC_00010666;geneIDs=comp153358_c0_seq1.path1;transcripts=comp153358_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121873359	121874178	.	-	.	ID=comp153358_c0_seq1.mrna1;geneID=comp153358_c0_seq1.path1;Name=comp153358_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=810;mismatches=10;indels=0;unknowns=0;Target=comp153358_c0_seq1 820 1 .;CDS_Target=comp153358_c0_seq1 689 600 .;locus=RLOC_00010666
Chr1	stalkie_big_nohaplotig	exon	121873359	121874178	98	-	.	Parent=comp153358_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121873490	121873579	.	-	0	Parent=comp153358_c0_seq1.mrna1
Chr1	gffcl	locus	121884508	121886063	.	+	.	ID=RLOC_00010667;geneIDs=FBgn0260400.1.path1;transcripts=FBgn0260400.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121884508	121886063	.	+	.	ID=FBgn0260400.1.mrna1;geneID=FBgn0260400.1.path1;Name=FBgn0260400.1;Dir=sensecoverage=100.0;identity=100.0;matches=1362;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010667
Chr1	stalkie_big_nohaplotig	exon	121884508	121884583	100	+	.	Parent=FBgn0260400.1.mrna1;Target=FBgn0260400.1 1 76 +
Chr1	stalkie_big_nohaplotig	exon	121884778	121886063	100	+	.	Parent=FBgn0260400.1.mrna1;Target=FBgn0260400.1 77 1362 +
Chr1	stalkie_big_nohaplotig	CDS	121884508	121884583	.	+	0	Parent=FBgn0260400.1.mrna1;Target=FBgn0260400.1 1 76 +
Chr1	stalkie_big_nohaplotig	CDS	121884778	121886063	.	+	2	Parent=FBgn0260400.1.mrna1;Target=FBgn0260400.1 77 1362 +
Chr1	gffcl	locus	121896394	121896940	.	-	.	ID=RLOC_00010668;geneIDs=comp116375_c0_seq1.path1;transcripts=comp116375_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121896394	121896940	.	-	.	ID=comp116375_c0_seq1.mrna1;geneID=comp116375_c0_seq1.path1;Name=comp116375_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=537;mismatches=1;indels=10;unknowns=0;Target=comp116375_c0_seq1 539 1 .;CDS_Target=comp116375_c0_seq1 127 44 .;locus=RLOC_00010668
Chr1	stalkie_big_nohaplotig	exon	121896394	121896940	97	-	.	Parent=comp116375_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121896805	121896897	.	-	0	Parent=comp116375_c0_seq1.mrna1
Chr1	gffcl	locus	121896958	121897532	.	-	.	ID=RLOC_00010669;geneIDs=comp135312_c0_seq1.path1;transcripts=comp135312_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121896958	121897532	.	-	.	ID=comp135312_c0_seq1.mrna1;geneID=comp135312_c0_seq1.path1;Name=comp135312_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=573;mismatches=2;indels=0;unknowns=0;Target=comp135312_c0_seq1 575 1 .;CDS_Target=comp135312_c0_seq1 526 407 .;locus=RLOC_00010669
Chr1	stalkie_big_nohaplotig	exon	121896958	121897532	99	-	.	Parent=comp135312_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121897007	121897126	.	-	0	Parent=comp135312_c0_seq1.mrna1
Chr1	gffcl	locus	121903704	121904388	.	-	.	ID=RLOC_00010670;geneIDs=comp157662_c0_seq1.path1;transcripts=comp157662_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121903704	121904388	.	-	.	ID=comp157662_c0_seq1.mrna1;geneID=comp157662_c0_seq1.path1;Name=comp157662_c0_seq1;Dir=indeterminatecoverage=99.0;identity=98.7;matches=683;mismatches=2;indels=7;unknowns=0;Target=comp157662_c0_seq1 699 8 .;CDS_Target=comp157662_c0_seq1 349 263 .;locus=RLOC_00010670
Chr1	stalkie_big_nohaplotig	exon	121903704	121904388	98	-	.	Parent=comp157662_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121904047	121904133	.	-	0	Parent=comp157662_c0_seq1.mrna1
Chr1	gffcl	locus	121904770	121935855	.	-	.	ID=RLOC_00010671;geneIDs=FBgn0004648.1.path1,comp163181_c0_seq1.path1;transcripts=FBgn0004648.1.mrna1,comp163181_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121904770	121935302	.	-	.	ID=FBgn0004648.1.mrna1;geneID=FBgn0004648.1.path1;Name=FBgn0004648.1;Dir=sensecoverage=100.0;identity=100.0;matches=4403;mismatches=2;indels=0;unknowns=2;locus=RLOC_00010671
Chr1	stalkie_big_nohaplotig	exon	121904770	121904894	100	-	.	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 4283 4407 +
Chr1	stalkie_big_nohaplotig	exon	121906441	121907504	99	-	.	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 3219 4282 +
Chr1	stalkie_big_nohaplotig	exon	121907571	121907723	100	-	.	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 3066 3218 +
Chr1	stalkie_big_nohaplotig	exon	121907898	121908121	100	-	.	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 2842 3065 +
Chr1	stalkie_big_nohaplotig	exon	121908179	121908372	100	-	.	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 2648 2841 +
Chr1	stalkie_big_nohaplotig	exon	121908433	121908512	100	-	.	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 2568 2647 +
Chr1	stalkie_big_nohaplotig	exon	121908571	121908980	99	-	.	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 2158 2567 +
Chr1	stalkie_big_nohaplotig	exon	121909042	121909684	100	-	.	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 1515 2157 +
Chr1	stalkie_big_nohaplotig	exon	121911660	121911771	100	-	.	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 1403 1514 +
Chr1	stalkie_big_nohaplotig	exon	121917450	121917550	100	-	.	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 1302 1402 +
Chr1	stalkie_big_nohaplotig	exon	121917633	121918112	100	-	.	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 822 1301 +
Chr1	stalkie_big_nohaplotig	exon	121919541	121919776	100	-	.	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 586 821 +
Chr1	stalkie_big_nohaplotig	exon	121934718	121935302	100	-	.	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 1 585 +
Chr1	stalkie_big_nohaplotig	CDS	121904770	121904894	.	-	2	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 4283 4407 +
Chr1	stalkie_big_nohaplotig	CDS	121906441	121907504	.	-	1	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 3219 4282 +
Chr1	stalkie_big_nohaplotig	CDS	121907571	121907723	.	-	1	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 3066 3218 +
Chr1	stalkie_big_nohaplotig	CDS	121907898	121908121	.	-	0	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 2842 3065 +
Chr1	stalkie_big_nohaplotig	CDS	121908179	121908372	.	-	2	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 2648 2841 +
Chr1	stalkie_big_nohaplotig	CDS	121908433	121908512	.	-	1	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 2568 2647 +
Chr1	stalkie_big_nohaplotig	CDS	121908571	121908980	.	-	0	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 2158 2567 +
Chr1	stalkie_big_nohaplotig	CDS	121909042	121909684	.	-	1	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 1515 2157 +
Chr1	stalkie_big_nohaplotig	CDS	121911660	121911771	.	-	2	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 1403 1514 +
Chr1	stalkie_big_nohaplotig	CDS	121917450	121917550	.	-	1	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 1302 1402 +
Chr1	stalkie_big_nohaplotig	CDS	121917633	121918112	.	-	1	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 822 1301 +
Chr1	stalkie_big_nohaplotig	CDS	121919541	121919776	.	-	0	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 586 821 +
Chr1	stalkie_big_nohaplotig	CDS	121934718	121935302	.	-	0	Parent=FBgn0004648.1.mrna1;Target=FBgn0004648.1 1 585 +
Chr1	stalkie_big_nohaplotig	mRNA	121908572	121935855	.	-	.	ID=comp163181_c0_seq1.mrna1;geneID=comp163181_c0_seq1.path1;Name=comp163181_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=3178;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010671
Chr1	stalkie_big_nohaplotig	exon	121908572	121909684	99	-	.	Parent=comp163181_c0_seq1.mrna1;Target=comp163181_c0_seq1 2069 3181 +
Chr1	stalkie_big_nohaplotig	exon	121911660	121911771	100	-	.	Parent=comp163181_c0_seq1.mrna1;Target=comp163181_c0_seq1 1957 2068 +
Chr1	stalkie_big_nohaplotig	exon	121917450	121917550	100	-	.	Parent=comp163181_c0_seq1.mrna1;Target=comp163181_c0_seq1 1856 1956 +
Chr1	stalkie_big_nohaplotig	exon	121917633	121918112	100	-	.	Parent=comp163181_c0_seq1.mrna1;Target=comp163181_c0_seq1 1376 1855 +
Chr1	stalkie_big_nohaplotig	exon	121919541	121919776	100	-	.	Parent=comp163181_c0_seq1.mrna1;Target=comp163181_c0_seq1 1140 1375 +
Chr1	stalkie_big_nohaplotig	exon	121934718	121935855	100	-	.	Parent=comp163181_c0_seq1.mrna1;Target=comp163181_c0_seq1 2 1139 +
Chr1	stalkie_big_nohaplotig	CDS	121908988	121909684	.	-	1	Parent=comp163181_c0_seq1.mrna1;Target=comp163181_c0_seq1 2069 2765 +
Chr1	stalkie_big_nohaplotig	CDS	121911660	121911771	.	-	2	Parent=comp163181_c0_seq1.mrna1;Target=comp163181_c0_seq1 1957 2068 +
Chr1	stalkie_big_nohaplotig	CDS	121917450	121917550	.	-	1	Parent=comp163181_c0_seq1.mrna1;Target=comp163181_c0_seq1 1856 1956 +
Chr1	stalkie_big_nohaplotig	CDS	121917633	121918112	.	-	1	Parent=comp163181_c0_seq1.mrna1;Target=comp163181_c0_seq1 1376 1855 +
Chr1	stalkie_big_nohaplotig	CDS	121919541	121919776	.	-	0	Parent=comp163181_c0_seq1.mrna1;Target=comp163181_c0_seq1 1140 1375 +
Chr1	stalkie_big_nohaplotig	CDS	121934718	121935167	.	-	0	Parent=comp163181_c0_seq1.mrna1;Target=comp163181_c0_seq1 690 1139 +
Chr1	gffcl	locus	121912799	121913358	.	-	.	ID=RLOC_00010672;geneIDs=comp155775_c0_seq1.path1;transcripts=comp155775_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121912799	121913358	.	-	.	ID=comp155775_c0_seq1.mrna1;geneID=comp155775_c0_seq1.path1;Name=comp155775_c0_seq1;Dir=indeterminatecoverage=97.0;identity=98.6;matches=553;mismatches=5;indels=3;unknowns=0;Target=comp155775_c0_seq1 576 18 .;CDS_Target=comp155775_c0_seq1 61 20 .;locus=RLOC_00010672
Chr1	stalkie_big_nohaplotig	exon	121912799	121913358	98	-	.	Parent=comp155775_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121913314	121913356	.	-	0	Parent=comp155775_c0_seq1.mrna1
Chr1	gffcl	locus	121913629	121914065	.	+	.	ID=RLOC_00010673;geneIDs=comp157357_c0_seq1.path1;transcripts=comp157357_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121913629	121914065	.	+	.	ID=comp157357_c0_seq1.mrna1;geneID=comp157357_c0_seq1.path1;Name=comp157357_c0_seq1;Dir=indeterminatecoverage=56.9;identity=90.2;matches=394;mismatches=11;indels=32;unknowns=0;Target=comp157357_c0_seq1 405 1 .;CDS_Target=comp157357_c0_seq1 31 2 .;locus=RLOC_00010673
Chr1	stalkie_big_nohaplotig	exon	121913629	121914065	90	+	.	Parent=comp157357_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121913630	121913659	.	+	0	Parent=comp157357_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121915312	121995219	.	-	.	ID=comp155832_c0_seq1.mrna1;geneID=comp155832_c0_seq1.path1;Name=comp155832_c0_seq1;Dir=indeterminatecoverage=74.3;identity=96.0;matches=287;mismatches=12;indels=0;unknowns=0;locus=RLOC_00010674
Chr1	stalkie_big_nohaplotig	exon	121915312	121915592	96	-	.	Parent=comp155832_c0_seq1.mrna1;Target=comp155832_c0_seq1 399 119 .
Chr1	stalkie_big_nohaplotig	exon	121961977	121961979	100	-	.	Parent=comp155832_c0_seq1.mrna1;Target=comp155832_c0_seq1 118 116 .
Chr1	stalkie_big_nohaplotig	exon	121965843	121965846	75	-	.	Parent=comp155832_c0_seq1.mrna1;Target=comp155832_c0_seq1 114 111 .
Chr1	stalkie_big_nohaplotig	exon	121995209	121995219	100	-	.	Parent=comp155832_c0_seq1.mrna1;Target=comp155832_c0_seq1 110 100 .
Chr1	stalkie_big_nohaplotig	CDS	121915591	121915592	.	-	0	Parent=comp155832_c0_seq1.mrna1;Target=comp155832_c0_seq1 120 119 .
Chr1	stalkie_big_nohaplotig	CDS	121961977	121961979	.	-	0	Parent=comp155832_c0_seq1.mrna1;Target=comp155832_c0_seq1 118 116 .
Chr1	stalkie_big_nohaplotig	CDS	121965843	121965846	.	-	1	Parent=comp155832_c0_seq1.mrna1;Target=comp155832_c0_seq1 114 111 .
Chr1	stalkie_big_nohaplotig	CDS	121995209	121995219	.	-	0	Parent=comp155832_c0_seq1.mrna1;Target=comp155832_c0_seq1 110 100 .
Chr1	stalkie_big_nohaplotig	mRNA	121965252	121966047	.	+	.	ID=comp152373_c0_seq1.mrna1;geneID=comp152373_c0_seq1.path1;Name=comp152373_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.6;matches=793;mismatches=3;indels=0;unknowns=0;Target=comp152373_c0_seq1 799 4 .;CDS_Target=comp152373_c0_seq1 757 653 .;locus=RLOC_00010674
Chr1	stalkie_big_nohaplotig	exon	121965252	121966047	99	+	.	Parent=comp152373_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121965901	121966005	.	+	0	Parent=comp152373_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121995420	122006297	.	-	.	ID=FBgn0030893.1.mrna1;geneID=FBgn0030893.1.path1;Name=FBgn0030893.1;Dir=sensecoverage=100.0;identity=100.0;matches=1362;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010674
Chr1	stalkie_big_nohaplotig	exon	121995420	121995600	100	-	.	Parent=FBgn0030893.1.mrna1;Target=FBgn0030893.1 1182 1362 +
Chr1	stalkie_big_nohaplotig	exon	121995832	121995937	100	-	.	Parent=FBgn0030893.1.mrna1;Target=FBgn0030893.1 1076 1181 +
Chr1	stalkie_big_nohaplotig	exon	121996939	121997274	100	-	.	Parent=FBgn0030893.1.mrna1;Target=FBgn0030893.1 740 1075 +
Chr1	stalkie_big_nohaplotig	exon	122005559	122006297	100	-	.	Parent=FBgn0030893.1.mrna1;Target=FBgn0030893.1 1 739 +
Chr1	stalkie_big_nohaplotig	CDS	121995420	121995600	.	-	1	Parent=FBgn0030893.1.mrna1;Target=FBgn0030893.1 1182 1362 +
Chr1	stalkie_big_nohaplotig	CDS	121995832	121995937	.	-	2	Parent=FBgn0030893.1.mrna1;Target=FBgn0030893.1 1076 1181 +
Chr1	stalkie_big_nohaplotig	CDS	121996939	121997274	.	-	2	Parent=FBgn0030893.1.mrna1;Target=FBgn0030893.1 740 1075 +
Chr1	stalkie_big_nohaplotig	CDS	122005559	122006297	.	-	0	Parent=FBgn0030893.1.mrna1;Target=FBgn0030893.1 1 739 +
Chr1	gffcl	locus	121916627	121917294	.	-	.	ID=RLOC_00010675;geneIDs=comp152288_c0_seq1.path1;transcripts=comp152288_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121916627	121917294	.	-	.	ID=comp152288_c0_seq1.mrna1;geneID=comp152288_c0_seq1.path1;Name=comp152288_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.7;matches=667;mismatches=1;indels=1;unknowns=0;Target=comp152288_c0_seq1 676 8 .;CDS_Target=comp152288_c0_seq1 509 405 .;locus=RLOC_00010675
Chr1	stalkie_big_nohaplotig	exon	121916627	121917294	99	-	.	Parent=comp152288_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121916794	121916898	.	-	0	Parent=comp152288_c0_seq1.mrna1
Chr1	gffcl	locus	121948732	121949548	.	+	.	ID=RLOC_00010676;geneIDs=FBgn0024986.1.path1;transcripts=FBgn0024986.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121948732	121949548	.	+	.	ID=FBgn0024986.1.mrna1;geneID=FBgn0024986.1.path1;Name=FBgn0024986.1;Dir=sensecoverage=100.0;identity=99.4;matches=468;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010676
Chr1	stalkie_big_nohaplotig	exon	121948732	121948899	98	+	.	Parent=FBgn0024986.1.mrna1;Target=FBgn0024986.1 1 168 +
Chr1	stalkie_big_nohaplotig	exon	121949246	121949548	100	+	.	Parent=FBgn0024986.1.mrna1;Target=FBgn0024986.1 169 471 +
Chr1	stalkie_big_nohaplotig	CDS	121948732	121948899	.	+	0	Parent=FBgn0024986.1.mrna1;Target=FBgn0024986.1 1 168 +
Chr1	stalkie_big_nohaplotig	CDS	121949246	121949548	.	+	0	Parent=FBgn0024986.1.mrna1;Target=FBgn0024986.1 169 471 +
Chr1	gffcl	locus	121950036	121951803	.	-	.	ID=RLOC_00010677;geneIDs=FBgn0023169.1.path1;transcripts=FBgn0023169.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121950036	121951803	.	-	.	ID=FBgn0023169.1.mrna1;geneID=FBgn0023169.1.path1;Name=FBgn0023169.1;Dir=sensecoverage=100.0;identity=99.6;matches=1689;mismatches=6;indels=0;unknowns=0;locus=RLOC_00010677
Chr1	stalkie_big_nohaplotig	exon	121950036	121951448	99	-	.	Parent=FBgn0023169.1.mrna1;Target=FBgn0023169.1 283 1695 +
Chr1	stalkie_big_nohaplotig	exon	121951522	121951803	100	-	.	Parent=FBgn0023169.1.mrna1;Target=FBgn0023169.1 1 282 +
Chr1	stalkie_big_nohaplotig	CDS	121950036	121951448	.	-	0	Parent=FBgn0023169.1.mrna1;Target=FBgn0023169.1 283 1695 +
Chr1	stalkie_big_nohaplotig	CDS	121951522	121951803	.	-	0	Parent=FBgn0023169.1.mrna1;Target=FBgn0023169.1 1 282 +
Chr1	gffcl	locus	121954661	121956031	.	-	.	ID=RLOC_00010678;geneIDs=FBgn0027791.1.path1;transcripts=FBgn0027791.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121954661	121956031	.	-	.	ID=FBgn0027791.1.mrna1;geneID=FBgn0027791.1.path1;Name=FBgn0027791.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1370;mismatches=1;indels=0;unknowns=0;Target=FBgn0027791.1 1371 1 .;locus=RLOC_00010678
Chr1	stalkie_big_nohaplotig	exon	121954661	121956031	99	-	.	Parent=FBgn0027791.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121954661	121956031	.	-	0	Parent=FBgn0027791.1.mrna1
Chr1	gffcl	locus	121958382	121960269	.	.	.	ID=RLOC_00010679;geneIDs=FBgn0015288.1.path1,comp60329_c0_seq1.path1,comp145844_c0_seq1.path1;transcripts=FBgn0015288.1.mrna1,comp60329_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121958382	121960269	.	-	.	ID=FBgn0015288.1.mrna1;geneID=FBgn0015288.1.path1;Name=FBgn0015288.1;Dir=sensecoverage=100.0;identity=99.5;matches=884;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010679
Chr1	stalkie_big_nohaplotig	exon	121958382	121958645	100	-	.	Parent=FBgn0015288.1.mrna1;Target=FBgn0015288.1 625 888 +
Chr1	stalkie_big_nohaplotig	exon	121959410	121960018	99	-	.	Parent=FBgn0015288.1.mrna1;Target=FBgn0015288.1 16 624 +
Chr1	stalkie_big_nohaplotig	exon	121960255	121960269	100	-	.	Parent=FBgn0015288.1.mrna1;Target=FBgn0015288.1 1 15 +
Chr1	stalkie_big_nohaplotig	CDS	121958382	121958645	.	-	0	Parent=FBgn0015288.1.mrna1;Target=FBgn0015288.1 625 888 +
Chr1	stalkie_big_nohaplotig	CDS	121959410	121960018	.	-	0	Parent=FBgn0015288.1.mrna1;Target=FBgn0015288.1 16 624 +
Chr1	stalkie_big_nohaplotig	CDS	121960255	121960269	.	-	0	Parent=FBgn0015288.1.mrna1;Target=FBgn0015288.1 1 15 +
Chr1	stalkie_big_nohaplotig	mRNA	121958961	121959432	.	-	.	ID=comp60329_c0_seq1.mrna1;geneID=comp60329_c0_seq1.path1;Name=comp60329_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=472;mismatches=0;indels=1;unknowns=0;Target=comp60329_c0_seq1 473 1 .;CDS_Target=comp60329_c0_seq1 439 362 .;locus=RLOC_00010679
Chr1	stalkie_big_nohaplotig	exon	121958961	121959432	99	-	.	Parent=comp60329_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121958995	121959072	.	-	0	Parent=comp60329_c0_seq1.mrna1
Chr1	gffcl	locus	121962877	121969318	.	+	.	ID=RLOC_00010680;geneIDs=FBgn0052672.1.path1;transcripts=FBgn0052672.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121962877	121969318	.	+	.	ID=FBgn0052672.1.mrna1;geneID=FBgn0052672.1.path1;Name=FBgn0052672.1;Dir=sensecoverage=100.0;identity=99.5;matches=364;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010680
Chr1	stalkie_big_nohaplotig	exon	121962877	121962978	99	+	.	Parent=FBgn0052672.1.mrna1;Target=FBgn0052672.1 1 102 +
Chr1	stalkie_big_nohaplotig	exon	121968989	121969186	99	+	.	Parent=FBgn0052672.1.mrna1;Target=FBgn0052672.1 103 300 +
Chr1	stalkie_big_nohaplotig	exon	121969253	121969318	100	+	.	Parent=FBgn0052672.1.mrna1;Target=FBgn0052672.1 301 366 +
Chr1	stalkie_big_nohaplotig	CDS	121962877	121962978	.	+	0	Parent=FBgn0052672.1.mrna1;Target=FBgn0052672.1 1 102 +
Chr1	stalkie_big_nohaplotig	CDS	121968989	121969186	.	+	0	Parent=FBgn0052672.1.mrna1;Target=FBgn0052672.1 103 300 +
Chr1	stalkie_big_nohaplotig	CDS	121969253	121969318	.	+	0	Parent=FBgn0052672.1.mrna1;Target=FBgn0052672.1 301 366 +
Chr1	gffcl	locus	121968187	121968796	.	-	.	ID=RLOC_00010681;geneIDs=comp140444_c0_seq1.path1;transcripts=comp140444_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121968187	121968796	.	-	.	ID=comp140444_c0_seq1.mrna1;geneID=comp140444_c0_seq1.path1;Name=comp140444_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.3;matches=573;mismatches=26;indels=15;unknowns=0;Target=comp140444_c0_seq1 603 1 .;CDS_Target=comp140444_c0_seq1 349 341 .;locus=RLOC_00010681
Chr1	stalkie_big_nohaplotig	exon	121968187	121968796	93	-	.	Parent=comp140444_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121968448	121968456	.	-	0	Parent=comp140444_c0_seq1.mrna1
Chr1	gffcl	locus	121973440	121974975	.	+	.	ID=RLOC_00010682;geneIDs=FBgn0052675.1.path1;transcripts=FBgn0052675.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121973440	121974975	.	+	.	ID=FBgn0052675.1.mrna1;geneID=FBgn0052675.1.path1;Name=FBgn0052675.1;Dir=sensecoverage=100.0;identity=99.8;matches=1314;mismatches=0;indels=3;unknowns=0;locus=RLOC_00010682
Chr1	stalkie_big_nohaplotig	exon	121973440	121973729	98	+	.	Parent=FBgn0052675.1.mrna1;Target=FBgn0052675.1 1 293 +
Chr1	stalkie_big_nohaplotig	exon	121973814	121974095	100	+	.	Parent=FBgn0052675.1.mrna1;Target=FBgn0052675.1 294 575 +
Chr1	stalkie_big_nohaplotig	exon	121974171	121974477	100	+	.	Parent=FBgn0052675.1.mrna1;Target=FBgn0052675.1 576 882 +
Chr1	stalkie_big_nohaplotig	exon	121974541	121974975	100	+	.	Parent=FBgn0052675.1.mrna1;Target=FBgn0052675.1 883 1317 +
Chr1	stalkie_big_nohaplotig	CDS	121973440	121973729	.	+	0	Parent=FBgn0052675.1.mrna1;Target=FBgn0052675.1 1 293 +
Chr1	stalkie_big_nohaplotig	CDS	121973814	121974095	.	+	1	Parent=FBgn0052675.1.mrna1;Target=FBgn0052675.1 294 575 +
Chr1	stalkie_big_nohaplotig	CDS	121974171	121974477	.	+	1	Parent=FBgn0052675.1.mrna1;Target=FBgn0052675.1 576 882 +
Chr1	stalkie_big_nohaplotig	CDS	121974541	121974975	.	+	0	Parent=FBgn0052675.1.mrna1;Target=FBgn0052675.1 883 1317 +
Chr1	gffcl	locus	121980015	121986551	.	+	.	ID=RLOC_00010683;geneIDs=FBgn0030230.1.path1;transcripts=FBgn0030230.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121980015	121986551	.	+	.	ID=FBgn0030230.1.mrna1;geneID=FBgn0030230.1.path1;Name=FBgn0030230.1;Dir=sensecoverage=100.0;identity=100.0;matches=2019;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010683
Chr1	stalkie_big_nohaplotig	exon	121980015	121980139	100	+	.	Parent=FBgn0030230.1.mrna1;Target=FBgn0030230.1 1 125 +
Chr1	stalkie_big_nohaplotig	exon	121984419	121985793	100	+	.	Parent=FBgn0030230.1.mrna1;Target=FBgn0030230.1 126 1500 +
Chr1	stalkie_big_nohaplotig	exon	121985975	121986192	100	+	.	Parent=FBgn0030230.1.mrna1;Target=FBgn0030230.1 1501 1718 +
Chr1	stalkie_big_nohaplotig	exon	121986251	121986551	100	+	.	Parent=FBgn0030230.1.mrna1;Target=FBgn0030230.1 1719 2019 +
Chr1	stalkie_big_nohaplotig	CDS	121980015	121980139	.	+	0	Parent=FBgn0030230.1.mrna1;Target=FBgn0030230.1 1 125 +
Chr1	stalkie_big_nohaplotig	CDS	121984419	121985793	.	+	1	Parent=FBgn0030230.1.mrna1;Target=FBgn0030230.1 126 1500 +
Chr1	stalkie_big_nohaplotig	CDS	121985975	121986192	.	+	0	Parent=FBgn0030230.1.mrna1;Target=FBgn0030230.1 1501 1718 +
Chr1	stalkie_big_nohaplotig	CDS	121986251	121986551	.	+	1	Parent=FBgn0030230.1.mrna1;Target=FBgn0030230.1 1719 2019 +
Chr1	gffcl	locus	121988379	121990070	.	+	.	ID=RLOC_00010684;geneIDs=FBgn0037138.3.path1;transcripts=FBgn0037138.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121988379	121990070	.	+	.	ID=FBgn0037138.3.mrna1;geneID=FBgn0037138.3.path1;Name=FBgn0037138.3;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1691;mismatches=1;indels=0;unknowns=0;Target=FBgn0037138.3 1692 1 .;locus=RLOC_00010684
Chr1	stalkie_big_nohaplotig	exon	121988379	121990070	99	+	.	Parent=FBgn0037138.3.mrna1
Chr1	stalkie_big_nohaplotig	CDS	121988379	121990070	.	+	0	Parent=FBgn0037138.3.mrna1
Chr1	gffcl	locus	121990631	121992139	.	-	.	ID=RLOC_00010685;geneIDs=FBgn0040382.1.path1;transcripts=FBgn0040382.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	121990631	121992139	.	-	.	ID=FBgn0040382.1.mrna1;geneID=FBgn0040382.1.path1;Name=FBgn0040382.1;Dir=sensecoverage=100.0;identity=99.7;matches=1448;mismatches=1;indels=3;unknowns=0;locus=RLOC_00010685
Chr1	stalkie_big_nohaplotig	exon	121990631	121991292	99	-	.	Parent=FBgn0040382.1.mrna1;Target=FBgn0040382.1 791 1449 +
Chr1	stalkie_big_nohaplotig	exon	121991350	121992139	100	-	.	Parent=FBgn0040382.1.mrna1;Target=FBgn0040382.1 1 790 +
Chr1	stalkie_big_nohaplotig	CDS	121990631	121991292	.	-	2	Parent=FBgn0040382.1.mrna1;Target=FBgn0040382.1 791 1449 +
Chr1	stalkie_big_nohaplotig	CDS	121991350	121992139	.	-	0	Parent=FBgn0040382.1.mrna1;Target=FBgn0040382.1 1 790 +
Chr1	gffcl	locus	122046476	122109026	.	.	.	ID=RLOC_00010686;geneIDs=FBgn0014133.1.path1,comp151310_c0_seq1.path1,comp160070_c3_seq1.path1;transcripts=FBgn0014133.1.mrna1,comp160070_c3_seq1.mrna1,comp151310_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122046476	122108477	.	+	.	ID=FBgn0014133.1.mrna1;geneID=FBgn0014133.1.path1;Name=FBgn0014133.1;Dir=sensecoverage=99.9;identity=99.5;matches=3539;mismatches=11;indels=6;unknowns=0;locus=RLOC_00010686
Chr1	stalkie_big_nohaplotig	exon	122046476	122049259	99	+	.	Parent=FBgn0014133.1.mrna1;Target=FBgn0014133.1 1 2778 +
Chr1	stalkie_big_nohaplotig	exon	122077134	122077307	100	+	.	Parent=FBgn0014133.1.mrna1;Target=FBgn0014133.1 2779 2952 +
Chr1	stalkie_big_nohaplotig	exon	122098256	122098553	99	+	.	Parent=FBgn0014133.1.mrna1;Target=FBgn0014133.1 2953 3250 +
Chr1	stalkie_big_nohaplotig	exon	122108178	122108477	100	+	.	Parent=FBgn0014133.1.mrna1;Target=FBgn0014133.1 3251 3550 +
Chr1	stalkie_big_nohaplotig	CDS	122046476	122049259	.	+	0	Parent=FBgn0014133.1.mrna1;Target=FBgn0014133.1 1 2778 +
Chr1	stalkie_big_nohaplotig	CDS	122077134	122077307	.	+	0	Parent=FBgn0014133.1.mrna1;Target=FBgn0014133.1 2779 2952 +
Chr1	stalkie_big_nohaplotig	CDS	122098256	122098553	.	+	0	Parent=FBgn0014133.1.mrna1;Target=FBgn0014133.1 2953 3250 +
Chr1	stalkie_big_nohaplotig	CDS	122108178	122108476	.	+	2	Parent=FBgn0014133.1.mrna1;Target=FBgn0014133.1 3251 3549 +
Chr1	stalkie_big_nohaplotig	mRNA	122046476	122109026	.	+	.	ID=comp160070_c3_seq1.mrna1;geneID=comp160070_c3_seq1.path1;Name=comp160070_c3_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=4706;mismatches=12;indels=10;unknowns=0;locus=RLOC_00010686
Chr1	stalkie_big_nohaplotig	exon	122046476	122049259	99	+	.	Parent=comp160070_c3_seq1.mrna1;Target=comp160070_c3_seq1 1 2778 +
Chr1	stalkie_big_nohaplotig	exon	122077134	122077307	100	+	.	Parent=comp160070_c3_seq1.mrna1;Target=comp160070_c3_seq1 2779 2952 +
Chr1	stalkie_big_nohaplotig	exon	122098256	122098553	99	+	.	Parent=comp160070_c3_seq1.mrna1;Target=comp160070_c3_seq1 2953 3250 +
Chr1	stalkie_big_nohaplotig	exon	122104651	122105271	99	+	.	Parent=comp160070_c3_seq1.mrna1;Target=comp160070_c3_seq1 3251 3871 +
Chr1	stalkie_big_nohaplotig	exon	122108178	122109026	99	+	.	Parent=comp160070_c3_seq1.mrna1;Target=comp160070_c3_seq1 3872 4720 +
Chr1	stalkie_big_nohaplotig	CDS	122046476	122049259	.	+	0	Parent=comp160070_c3_seq1.mrna1;Target=comp160070_c3_seq1 1 2778 +
Chr1	stalkie_big_nohaplotig	CDS	122077134	122077307	.	+	0	Parent=comp160070_c3_seq1.mrna1;Target=comp160070_c3_seq1 2779 2952 +
Chr1	stalkie_big_nohaplotig	CDS	122098256	122098553	.	+	0	Parent=comp160070_c3_seq1.mrna1;Target=comp160070_c3_seq1 2953 3250 +
Chr1	stalkie_big_nohaplotig	CDS	122104651	122104661	.	+	2	Parent=comp160070_c3_seq1.mrna1;Target=comp160070_c3_seq1 3251 3261 +
Chr1	stalkie_big_nohaplotig	mRNA	122105249	122105617	.	-	.	ID=comp151310_c0_seq1.mrna1;geneID=comp151310_c0_seq1.path1;Name=comp151310_c0_seq1;Dir=indeterminatecoverage=96.9;identity=98.9;matches=368;mismatches=1;indels=3;unknowns=0;Target=comp151310_c0_seq1 384 13 .;CDS_Target=comp151310_c0_seq1 137 78 .;locus=RLOC_00010686
Chr1	stalkie_big_nohaplotig	exon	122105249	122105617	98	-	.	Parent=comp151310_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122105493	122105552	.	-	0	Parent=comp151310_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122238355	122246841	.	+	.	ID=FBgn0040383.2.mrna1;geneID=FBgn0040383.2.path1;Name=FBgn0040383.2;Dir=sensecoverage=100.0;identity=100.0;matches=918;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010687
Chr1	stalkie_big_nohaplotig	exon	122238355	122238519	100	+	.	Parent=FBgn0040383.2.mrna1;Target=FBgn0040383.2 1 165 +
Chr1	stalkie_big_nohaplotig	exon	122246038	122246220	100	+	.	Parent=FBgn0040383.2.mrna1;Target=FBgn0040383.2 166 348 +
Chr1	stalkie_big_nohaplotig	exon	122246272	122246841	100	+	.	Parent=FBgn0040383.2.mrna1;Target=FBgn0040383.2 349 918 +
Chr1	stalkie_big_nohaplotig	CDS	122238355	122238519	.	+	0	Parent=FBgn0040383.2.mrna1;Target=FBgn0040383.2 1 165 +
Chr1	stalkie_big_nohaplotig	CDS	122246038	122246220	.	+	0	Parent=FBgn0040383.2.mrna1;Target=FBgn0040383.2 166 348 +
Chr1	stalkie_big_nohaplotig	CDS	122246272	122246841	.	+	0	Parent=FBgn0040383.2.mrna1;Target=FBgn0040383.2 349 918 +
Chr1	gffcl	locus	122100473	122101606	.	+	.	ID=RLOC_00010688;geneIDs=ORF1314.path1;transcripts=ORF1314.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122100473	122101606	.	+	.	ID=ORF1314.mrna1;geneID=ORF1314.path1;Name=ORF1314;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1131;mismatches=3;indels=9;unknowns=0;Target=ORF1314 1143 1 .;locus=RLOC_00010688
Chr1	stalkie_big_nohaplotig	exon	122100473	122101606	98	+	.	Parent=ORF1314.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122100473	122101606	.	+	0	Parent=ORF1314.mrna1
Chr1	gffcl	locus	122102075	122103188	.	-	.	ID=RLOC_00010689;geneIDs=comp160079_c0_seq1.path1;transcripts=comp160079_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122102075	122103188	.	-	.	ID=comp160079_c0_seq1.mrna1;geneID=comp160079_c0_seq1.path1;Name=comp160079_c0_seq1;Dir=indeterminatecoverage=100.0;identity=87.5;matches=1076;mismatches=38;indels=116;unknowns=0;Target=comp160079_c0_seq1 1230 1 .;CDS_Target=comp160079_c0_seq1 112 2 .;locus=RLOC_00010689
Chr1	stalkie_big_nohaplotig	exon	122102075	122103188	87	-	.	Parent=comp160079_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122103090	122103187	.	-	0	Parent=comp160079_c0_seq1.mrna1
Chr1	gffcl	locus	122104419	122108127	.	-	.	ID=RLOC_00010690;geneIDs=comp162715_c0_seq1.path1;transcripts=comp162715_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122104419	122108127	.	-	.	ID=comp162715_c0_seq1.mrna1;geneID=comp162715_c0_seq1.path1;Name=comp162715_c0_seq1;Dir=indeterminatecoverage=55.1;identity=94.0;matches=2002;mismatches=38;indels=90;unknowns=0;Target=comp162715_c0_seq1 2231 2178 .;locus=RLOC_00010690
Chr1	stalkie_big_nohaplotig	exon	122104419	122104440	46	-	.	Parent=comp162715_c0_seq1.mrna1;Target=comp162715_c0_seq1 3568 3524 .
Chr1	stalkie_big_nohaplotig	exon	122106102	122108127	95	-	.	Parent=comp162715_c0_seq1.mrna1;Target=comp162715_c0_seq1 3523 1447 .
Chr1	stalkie_big_nohaplotig	CDS	122107339	122107392	.	-	0	Parent=comp162715_c0_seq1.mrna1
Chr1	gffcl	locus	122109257	122109728	.	+	.	ID=RLOC_00010691;geneIDs=comp143781_c0_seq1.path1;transcripts=comp143781_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122109257	122109728	.	+	.	ID=comp143781_c0_seq1.mrna1;geneID=comp143781_c0_seq1.path1;Name=comp143781_c0_seq1;Dir=indeterminatecoverage=96.3;identity=99.8;matches=471;mismatches=0;indels=1;unknowns=0;Target=comp143781_c0_seq1 489 19 .;CDS_Target=comp143781_c0_seq1 477 334 .;locus=RLOC_00010691
Chr1	stalkie_big_nohaplotig	exon	122109257	122109728	99	+	.	Parent=comp143781_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122109573	122109716	.	+	0	Parent=comp143781_c0_seq1.mrna1
Chr1	gffcl	locus	122111487	122112323	.	+	.	ID=RLOC_00010692;geneIDs=ORF2613.path1;transcripts=ORF2613.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122111487	122112323	.	+	.	ID=ORF2613.mrna1;geneID=ORF2613.path1;Name=ORF2613;Dir=indeterminatecoverage=100.0;identity=97.8;matches=819;mismatches=15;indels=3;unknowns=0;Target=ORF2613 834 1 .;locus=RLOC_00010692
Chr1	stalkie_big_nohaplotig	exon	122111487	122112323	97	+	.	Parent=ORF2613.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122111487	122112323	.	+	0	Parent=ORF2613.mrna1
Chr1	gffcl	locus	122113643	122115130	.	-	.	ID=RLOC_00010693;geneIDs=FBgn0029711.1.path1;transcripts=FBgn0029711.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122113643	122115130	.	-	.	ID=FBgn0029711.1.mrna1;geneID=FBgn0029711.1.path1;Name=FBgn0029711.1;Dir=sensecoverage=100.0;identity=99.8;matches=1288;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010693
Chr1	stalkie_big_nohaplotig	exon	122113643	122113934	99	-	.	Parent=FBgn0029711.1.mrna1;Target=FBgn0029711.1 999 1290 +
Chr1	stalkie_big_nohaplotig	exon	122114002	122114342	100	-	.	Parent=FBgn0029711.1.mrna1;Target=FBgn0029711.1 658 998 +
Chr1	stalkie_big_nohaplotig	exon	122114409	122114964	99	-	.	Parent=FBgn0029711.1.mrna1;Target=FBgn0029711.1 102 657 +
Chr1	stalkie_big_nohaplotig	exon	122115030	122115130	100	-	.	Parent=FBgn0029711.1.mrna1;Target=FBgn0029711.1 1 101 +
Chr1	stalkie_big_nohaplotig	CDS	122113643	122113934	.	-	1	Parent=FBgn0029711.1.mrna1;Target=FBgn0029711.1 999 1290 +
Chr1	stalkie_big_nohaplotig	CDS	122114002	122114342	.	-	0	Parent=FBgn0029711.1.mrna1;Target=FBgn0029711.1 658 998 +
Chr1	stalkie_big_nohaplotig	CDS	122114409	122114964	.	-	1	Parent=FBgn0029711.1.mrna1;Target=FBgn0029711.1 102 657 +
Chr1	stalkie_big_nohaplotig	CDS	122115030	122115130	.	-	0	Parent=FBgn0029711.1.mrna1;Target=FBgn0029711.1 1 101 +
Chr1	gffcl	locus	122117107	122118239	.	+	.	ID=RLOC_00010694;geneIDs=ORF1881.path1;transcripts=ORF1881.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122117107	122118239	.	+	.	ID=ORF1881.mrna1;geneID=ORF1881.path1;Name=ORF1881;Dir=sensecoverage=100.0;identity=98.4;matches=956;mismatches=16;indels=0;unknowns=0;locus=RLOC_00010694
Chr1	stalkie_big_nohaplotig	exon	122117107	122117262	98	+	.	Parent=ORF1881.mrna1;Target=ORF1881 1 156 +
Chr1	stalkie_big_nohaplotig	exon	122117312	122117414	99	+	.	Parent=ORF1881.mrna1;Target=ORF1881 157 259 +
Chr1	stalkie_big_nohaplotig	exon	122117469	122117628	96	+	.	Parent=ORF1881.mrna1;Target=ORF1881 260 419 +
Chr1	stalkie_big_nohaplotig	exon	122117687	122118239	98	+	.	Parent=ORF1881.mrna1;Target=ORF1881 420 972 +
Chr1	stalkie_big_nohaplotig	CDS	122117107	122117262	.	+	0	Parent=ORF1881.mrna1;Target=ORF1881 1 156 +
Chr1	stalkie_big_nohaplotig	CDS	122117312	122117414	.	+	0	Parent=ORF1881.mrna1;Target=ORF1881 157 259 +
Chr1	stalkie_big_nohaplotig	CDS	122117469	122117628	.	+	2	Parent=ORF1881.mrna1;Target=ORF1881 260 419 +
Chr1	stalkie_big_nohaplotig	CDS	122117687	122118239	.	+	1	Parent=ORF1881.mrna1;Target=ORF1881 420 972 +
Chr1	gffcl	locus	122118413	122119114	.	-	.	ID=RLOC_00010695;geneIDs=FBgn0031021.1.path1;transcripts=FBgn0031021.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122118413	122119114	.	-	.	ID=FBgn0031021.1.mrna1;geneID=FBgn0031021.1.path1;Name=FBgn0031021.1;Dir=sensecoverage=100.0;identity=99.8;matches=590;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010695
Chr1	stalkie_big_nohaplotig	exon	122118413	122118590	100	-	.	Parent=FBgn0031021.1.mrna1;Target=FBgn0031021.1 414 591 +
Chr1	stalkie_big_nohaplotig	exon	122118651	122118950	99	-	.	Parent=FBgn0031021.1.mrna1;Target=FBgn0031021.1 114 413 +
Chr1	stalkie_big_nohaplotig	exon	122119002	122119114	100	-	.	Parent=FBgn0031021.1.mrna1;Target=FBgn0031021.1 1 113 +
Chr1	stalkie_big_nohaplotig	CDS	122118413	122118590	.	-	1	Parent=FBgn0031021.1.mrna1;Target=FBgn0031021.1 414 591 +
Chr1	stalkie_big_nohaplotig	CDS	122118651	122118950	.	-	1	Parent=FBgn0031021.1.mrna1;Target=FBgn0031021.1 114 413 +
Chr1	stalkie_big_nohaplotig	CDS	122119002	122119114	.	-	0	Parent=FBgn0031021.1.mrna1;Target=FBgn0031021.1 1 113 +
Chr1	gffcl	locus	122120497	122121803	.	+	.	ID=RLOC_00010696;geneIDs=FBgn0011741.1.path1;transcripts=FBgn0011741.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122120497	122121803	.	+	.	ID=FBgn0011741.1.mrna1;geneID=FBgn0011741.1.path1;Name=FBgn0011741.1;Dir=sensecoverage=100.0;identity=99.8;matches=1239;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010696
Chr1	stalkie_big_nohaplotig	exon	122120497	122120511	100	+	.	Parent=FBgn0011741.1.mrna1;Target=FBgn0011741.1 1 15 +
Chr1	stalkie_big_nohaplotig	exon	122120577	122121803	99	+	.	Parent=FBgn0011741.1.mrna1;Target=FBgn0011741.1 16 1242 +
Chr1	stalkie_big_nohaplotig	CDS	122120497	122120511	.	+	0	Parent=FBgn0011741.1.mrna1;Target=FBgn0011741.1 1 15 +
Chr1	stalkie_big_nohaplotig	CDS	122120577	122121803	.	+	0	Parent=FBgn0011741.1.mrna1;Target=FBgn0011741.1 16 1242 +
Chr1	gffcl	locus	122122109	122122740	.	-	.	ID=RLOC_00010697;geneIDs=FBgn0026666.1.path1;transcripts=FBgn0026666.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122122109	122122740	.	-	.	ID=FBgn0026666.1.mrna1;geneID=FBgn0026666.1.path1;Name=FBgn0026666.1;Dir=sensecoverage=100.0;identity=99.7;matches=392;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010697
Chr1	stalkie_big_nohaplotig	exon	122122109	122122209	100	-	.	Parent=FBgn0026666.1.mrna1;Target=FBgn0026666.1 293 393 +
Chr1	stalkie_big_nohaplotig	exon	122122276	122122350	100	-	.	Parent=FBgn0026666.1.mrna1;Target=FBgn0026666.1 218 292 +
Chr1	stalkie_big_nohaplotig	exon	122122407	122122482	100	-	.	Parent=FBgn0026666.1.mrna1;Target=FBgn0026666.1 142 217 +
Chr1	stalkie_big_nohaplotig	exon	122122539	122122592	98	-	.	Parent=FBgn0026666.1.mrna1;Target=FBgn0026666.1 88 141 +
Chr1	stalkie_big_nohaplotig	exon	122122654	122122740	100	-	.	Parent=FBgn0026666.1.mrna1;Target=FBgn0026666.1 1 87 +
Chr1	stalkie_big_nohaplotig	CDS	122122109	122122209	.	-	2	Parent=FBgn0026666.1.mrna1;Target=FBgn0026666.1 293 393 +
Chr1	stalkie_big_nohaplotig	CDS	122122276	122122350	.	-	2	Parent=FBgn0026666.1.mrna1;Target=FBgn0026666.1 218 292 +
Chr1	stalkie_big_nohaplotig	CDS	122122407	122122482	.	-	0	Parent=FBgn0026666.1.mrna1;Target=FBgn0026666.1 142 217 +
Chr1	stalkie_big_nohaplotig	CDS	122122539	122122592	.	-	0	Parent=FBgn0026666.1.mrna1;Target=FBgn0026666.1 88 141 +
Chr1	stalkie_big_nohaplotig	CDS	122122654	122122740	.	-	0	Parent=FBgn0026666.1.mrna1;Target=FBgn0026666.1 1 87 +
Chr1	gffcl	locus	122139912	122140385	.	+	.	ID=RLOC_00010698;geneIDs=comp133100_c0_seq1.path1;transcripts=comp133100_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122139912	122140385	.	+	.	ID=comp133100_c0_seq1.mrna1;geneID=comp133100_c0_seq1.path1;Name=comp133100_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=472;mismatches=2;indels=1;unknowns=0;Target=comp133100_c0_seq1 475 1 .;CDS_Target=comp133100_c0_seq1 240 130 .;locus=RLOC_00010698
Chr1	stalkie_big_nohaplotig	exon	122139912	122140385	99	+	.	Parent=comp133100_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122140040	122140150	.	+	0	Parent=comp133100_c0_seq1.mrna1
Chr1	gffcl	locus	122143808	122145257	.	+	.	ID=RLOC_00010699;geneIDs=comp156352_c0_seq1.path1;transcripts=comp156352_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122143808	122145257	.	+	.	ID=comp156352_c0_seq1.mrna1;geneID=comp156352_c0_seq1.path1;Name=comp156352_c0_seq1;Dir=antisensecoverage=99.7;identity=99.1;matches=738;mismatches=4;indels=3;unknowns=0;locus=RLOC_00010699
Chr1	stalkie_big_nohaplotig	exon	122143808	122144317	99	+	.	Parent=comp156352_c0_seq1.mrna1;Target=comp156352_c0_seq1 237 745 -
Chr1	stalkie_big_nohaplotig	exon	122145025	122145257	98	+	.	Parent=comp156352_c0_seq1.mrna1;Target=comp156352_c0_seq1 2 236 -
Chr1	stalkie_big_nohaplotig	CDS	122144279	122144317	.	+	0	Parent=comp156352_c0_seq1.mrna1;Target=comp156352_c0_seq1 237 275 .
Chr1	stalkie_big_nohaplotig	CDS	122145025	122145074	.	+	0	Parent=comp156352_c0_seq1.mrna1;Target=comp156352_c0_seq1 186 236 .
Chr1	gffcl	locus	122177465	122177742	.	+	.	ID=RLOC_00010700;geneIDs=comp159651_c1_seq1.path2;transcripts=comp159651_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	122177465	122177742	.	+	.	ID=comp159651_c1_seq1.mrna2;geneID=comp159651_c1_seq1.path2;Name=comp159651_c1_seq1;Dir=indeterminatecoverage=9.0;identity=100.0;matches=278;mismatches=0;indels=0;unknowns=0;Target=comp159651_c1_seq1 3096 2819 .;locus=RLOC_00010700
Chr1	stalkie_big_nohaplotig	exon	122177465	122177742	100	+	.	Parent=comp159651_c1_seq1.mrna2
Chr1	gffcl	locus	122185060	122186001	.	+	.	ID=RLOC_00010701;geneIDs=comp147258_c1_seq1.path1;transcripts=comp147258_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122185060	122186001	.	+	.	ID=comp147258_c1_seq1.mrna1;geneID=comp147258_c1_seq1.path1;Name=comp147258_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=940;mismatches=2;indels=0;unknowns=0;Target=comp147258_c1_seq1 942 1 .;CDS_Target=comp147258_c1_seq1 942 85 .;locus=RLOC_00010701
Chr1	stalkie_big_nohaplotig	exon	122185060	122186001	99	+	.	Parent=comp147258_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122185144	122186001	.	+	0	Parent=comp147258_c1_seq1.mrna1
Chr1	gffcl	locus	122192508	122193841	.	-	.	ID=RLOC_00010702;geneIDs=comp157640_c0_seq1.path1;transcripts=comp157640_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122192508	122193841	.	-	.	ID=comp157640_c0_seq1.mrna1;geneID=comp157640_c0_seq1.path1;Name=comp157640_c0_seq1;Dir=sensecoverage=80.9;identity=97.5;matches=1240;mismatches=20;indels=12;unknowns=0;Target=comp157640_c0_seq1 395 703 +;locus=RLOC_00010702
Chr1	stalkie_big_nohaplotig	exon	122192508	122193324	98	-	.	Parent=comp157640_c0_seq1.mrna1;Target=comp157640_c0_seq1 724 1540 +
Chr1	stalkie_big_nohaplotig	exon	122193387	122193841	96	-	.	Parent=comp157640_c0_seq1.mrna1;Target=comp157640_c0_seq1 281 723 +
Chr1	stalkie_big_nohaplotig	CDS	122193407	122193715	.	-	0	Parent=comp157640_c0_seq1.mrna1
Chr1	gffcl	locus	122215120	122219398	.	+	.	ID=RLOC_00010703;geneIDs=FBgn0010303.path1;transcripts=FBgn0010303.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122215120	122219398	.	+	.	ID=FBgn0010303.mrna1;geneID=FBgn0010303.path1;Name=FBgn0010303;Dir=sensecoverage=100.0;identity=99.8;matches=1281;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010703
Chr1	stalkie_big_nohaplotig	exon	122215120	122215375	99	+	.	Parent=FBgn0010303.mrna1;Target=FBgn0010303 1 256 +
Chr1	stalkie_big_nohaplotig	exon	122217716	122218185	99	+	.	Parent=FBgn0010303.mrna1;Target=FBgn0010303 257 726 +
Chr1	stalkie_big_nohaplotig	exon	122218256	122218435	100	+	.	Parent=FBgn0010303.mrna1;Target=FBgn0010303 727 906 +
Chr1	stalkie_big_nohaplotig	exon	122218506	122218726	100	+	.	Parent=FBgn0010303.mrna1;Target=FBgn0010303 907 1127 +
Chr1	stalkie_big_nohaplotig	exon	122218787	122218930	100	+	.	Parent=FBgn0010303.mrna1;Target=FBgn0010303 1128 1271 +
Chr1	stalkie_big_nohaplotig	exon	122219386	122219398	100	+	.	Parent=FBgn0010303.mrna1;Target=FBgn0010303 1272 1284 +
Chr1	stalkie_big_nohaplotig	CDS	122215120	122215375	.	+	0	Parent=FBgn0010303.mrna1;Target=FBgn0010303 1 256 +
Chr1	stalkie_big_nohaplotig	CDS	122217716	122218185	.	+	2	Parent=FBgn0010303.mrna1;Target=FBgn0010303 257 726 +
Chr1	stalkie_big_nohaplotig	CDS	122218256	122218435	.	+	0	Parent=FBgn0010303.mrna1;Target=FBgn0010303 727 906 +
Chr1	stalkie_big_nohaplotig	CDS	122218506	122218726	.	+	0	Parent=FBgn0010303.mrna1;Target=FBgn0010303 907 1127 +
Chr1	stalkie_big_nohaplotig	CDS	122218787	122218930	.	+	1	Parent=FBgn0010303.mrna1;Target=FBgn0010303 1128 1271 +
Chr1	stalkie_big_nohaplotig	CDS	122219386	122219398	.	+	1	Parent=FBgn0010303.mrna1;Target=FBgn0010303 1272 1284 +
Chr1	gffcl	locus	122228140	122228282	.	-	.	ID=RLOC_00010704;geneIDs=comp153258_c0_seq1.path1;transcripts=comp153258_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122228140	122228282	.	-	.	ID=comp153258_c0_seq1.mrna1;geneID=comp153258_c0_seq1.path1;Name=comp153258_c0_seq1;Dir=indeterminatecoverage=16.6;identity=97.2;matches=139;mismatches=4;indels=0;unknowns=0;Target=comp153258_c0_seq1 143 1 .;CDS_Target=comp153258_c0_seq1 138 1 .;locus=RLOC_00010704
Chr1	stalkie_big_nohaplotig	exon	122228140	122228282	97	-	.	Parent=comp153258_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122228145	122228282	.	-	0	Parent=comp153258_c0_seq1.mrna1
Chr1	gffcl	locus	122229380	122230228	.	+	.	ID=RLOC_00010705;geneIDs=comp152787_c0_seq1.path1;transcripts=comp152787_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122229380	122230228	.	+	.	ID=comp152787_c0_seq1.mrna1;geneID=comp152787_c0_seq1.path1;Name=comp152787_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=843;mismatches=5;indels=1;unknowns=0;Target=comp152787_c0_seq1 848 1 .;CDS_Target=comp152787_c0_seq1 388 299 .;locus=RLOC_00010705
Chr1	stalkie_big_nohaplotig	exon	122229380	122230228	99	+	.	Parent=comp152787_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122229678	122229767	.	+	0	Parent=comp152787_c0_seq1.mrna1
Chr1	gffcl	locus	122249206	122255711	.	+	.	ID=RLOC_00010706;geneIDs=FBgn0040383.1.path1;transcripts=FBgn0040383.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122249206	122255711	.	+	.	ID=FBgn0040383.1.mrna1;geneID=FBgn0040383.1.path1;Name=FBgn0040383.1;Dir=sensecoverage=100.0;identity=99.6;matches=935;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010706
Chr1	stalkie_big_nohaplotig	exon	122249206	122249385	98	+	.	Parent=FBgn0040383.1.mrna1;Target=FBgn0040383.1 1 180 +
Chr1	stalkie_big_nohaplotig	exon	122254897	122255079	99	+	.	Parent=FBgn0040383.1.mrna1;Target=FBgn0040383.1 181 363 +
Chr1	stalkie_big_nohaplotig	exon	122255136	122255711	99	+	.	Parent=FBgn0040383.1.mrna1;Target=FBgn0040383.1 364 939 +
Chr1	stalkie_big_nohaplotig	CDS	122249206	122249385	.	+	0	Parent=FBgn0040383.1.mrna1;Target=FBgn0040383.1 1 180 +
Chr1	stalkie_big_nohaplotig	CDS	122254897	122255079	.	+	0	Parent=FBgn0040383.1.mrna1;Target=FBgn0040383.1 181 363 +
Chr1	stalkie_big_nohaplotig	CDS	122255136	122255711	.	+	0	Parent=FBgn0040383.1.mrna1;Target=FBgn0040383.1 364 939 +
Chr1	gffcl	locus	122264545	122266883	.	+	.	ID=RLOC_00010707;geneIDs=ORF1066.path1,comp65315_c0_seq1.path1,comp146548_c0_seq1.path1;transcripts=ORF1066.mrna1,comp146548_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122265398	122266712	.	+	.	ID=ORF1066.mrna1;geneID=ORF1066.path1;Name=ORF1066;Dir=sensecoverage=100.0;identity=99.9;matches=1253;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010707
Chr1	stalkie_big_nohaplotig	exon	122265398	122265917	99	+	.	Parent=ORF1066.mrna1;Target=ORF1066 1 520 +
Chr1	stalkie_big_nohaplotig	exon	122265979	122266712	100	+	.	Parent=ORF1066.mrna1;Target=ORF1066 521 1254 +
Chr1	stalkie_big_nohaplotig	CDS	122265398	122265917	.	+	0	Parent=ORF1066.mrna1;Target=ORF1066 1 520 +
Chr1	stalkie_big_nohaplotig	CDS	122265979	122266712	.	+	2	Parent=ORF1066.mrna1;Target=ORF1066 521 1254 +
Chr1	stalkie_big_nohaplotig	mRNA	122265398	122266883	.	+	.	ID=comp146548_c0_seq1.mrna1;geneID=comp146548_c0_seq1.path1;Name=comp146548_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1485;mismatches=1;indels=0;unknowns=0;Target=comp146548_c0_seq1 1486 1 .;CDS_Target=comp146548_c0_seq1 1318 530 .;locus=RLOC_00010707
Chr1	stalkie_big_nohaplotig	exon	122265398	122266883	99	+	.	Parent=comp146548_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122265927	122266715	.	+	0	Parent=comp146548_c0_seq1.mrna1
Chr1	gffcl	locus	122282988	122284012	.	+	.	ID=RLOC_00010708;geneIDs=comp118024_c1_seq1.path1;transcripts=comp118024_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122282988	122284012	.	+	.	ID=comp118024_c1_seq1.mrna1;geneID=comp118024_c1_seq1.path1;Name=comp118024_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1025;mismatches=0;indels=0;unknowns=0;Target=comp118024_c1_seq1 1025 1 .;CDS_Target=comp118024_c1_seq1 221 108 .;locus=RLOC_00010708
Chr1	stalkie_big_nohaplotig	exon	122282988	122284012	100	+	.	Parent=comp118024_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122283095	122283208	.	+	0	Parent=comp118024_c1_seq1.mrna1
Chr1	gffcl	locus	122284615	122285140	.	-	.	ID=RLOC_00010709;geneIDs=comp156677_c1_seq1.path1;transcripts=comp156677_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122284615	122285140	.	-	.	ID=comp156677_c1_seq1.mrna1;geneID=comp156677_c1_seq1.path1;Name=comp156677_c1_seq1;Dir=indeterminatecoverage=93.4;identity=100.0;matches=526;mismatches=0;indels=0;unknowns=0;Target=comp156677_c1_seq1 563 38 .;CDS_Target=comp156677_c1_seq1 402 298 .;locus=RLOC_00010709
Chr1	stalkie_big_nohaplotig	exon	122284615	122285140	100	-	.	Parent=comp156677_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122284776	122284880	.	-	0	Parent=comp156677_c1_seq1.mrna1
Chr1	gffcl	locus	122286707	122286983	.	-	.	ID=RLOC_00010710;geneIDs=comp136535_c0_seq1.path1;transcripts=comp136535_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122286707	122286983	.	-	.	ID=comp136535_c0_seq1.mrna1;geneID=comp136535_c0_seq1.path1;Name=comp136535_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=277;mismatches=0;indels=0;unknowns=0;Target=comp136535_c0_seq1 277 1 .;CDS_Target=comp136535_c0_seq1 104 3 .;locus=RLOC_00010710
Chr1	stalkie_big_nohaplotig	exon	122286707	122286983	100	-	.	Parent=comp136535_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122286880	122286981	.	-	0	Parent=comp136535_c0_seq1.mrna1
Chr1	gffcl	locus	122294522	122302387	.	-	.	ID=RLOC_00010711;geneIDs=FBgn0003048.1.path1;transcripts=FBgn0003048.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122294522	122302387	.	-	.	ID=FBgn0003048.1.mrna1;geneID=FBgn0003048.1.path1;Name=FBgn0003048.1;Dir=sensecoverage=100.0;identity=99.9;matches=7207;mismatches=4;indels=1;unknowns=0;locus=RLOC_00010711
Chr1	stalkie_big_nohaplotig	exon	122294522	122295354	99	-	.	Parent=FBgn0003048.1.mrna1;Target=FBgn0003048.1 6379 7212 +
Chr1	stalkie_big_nohaplotig	exon	122295424	122295770	100	-	.	Parent=FBgn0003048.1.mrna1;Target=FBgn0003048.1 6032 6378 +
Chr1	stalkie_big_nohaplotig	exon	122295854	122296253	100	-	.	Parent=FBgn0003048.1.mrna1;Target=FBgn0003048.1 5632 6031 +
Chr1	stalkie_big_nohaplotig	exon	122296319	122296479	100	-	.	Parent=FBgn0003048.1.mrna1;Target=FBgn0003048.1 5471 5631 +
Chr1	stalkie_big_nohaplotig	exon	122296550	122297734	99	-	.	Parent=FBgn0003048.1.mrna1;Target=FBgn0003048.1 4286 5470 +
Chr1	stalkie_big_nohaplotig	exon	122297799	122300648	99	-	.	Parent=FBgn0003048.1.mrna1;Target=FBgn0003048.1 1436 4285 +
Chr1	stalkie_big_nohaplotig	exon	122300718	122301623	100	-	.	Parent=FBgn0003048.1.mrna1;Target=FBgn0003048.1 530 1435 +
Chr1	stalkie_big_nohaplotig	exon	122301686	122301807	100	-	.	Parent=FBgn0003048.1.mrna1;Target=FBgn0003048.1 408 529 +
Chr1	stalkie_big_nohaplotig	exon	122301861	122302036	100	-	.	Parent=FBgn0003048.1.mrna1;Target=FBgn0003048.1 232 407 +
Chr1	stalkie_big_nohaplotig	exon	122302157	122302387	100	-	.	Parent=FBgn0003048.1.mrna1;Target=FBgn0003048.1 1 231 +
Chr1	stalkie_big_nohaplotig	CDS	122294522	122295354	.	-	0	Parent=FBgn0003048.1.mrna1;Target=FBgn0003048.1 6379 7212 +
Chr1	stalkie_big_nohaplotig	CDS	122295424	122295770	.	-	2	Parent=FBgn0003048.1.mrna1;Target=FBgn0003048.1 6032 6378 +
Chr1	stalkie_big_nohaplotig	CDS	122295854	122296253	.	-	0	Parent=FBgn0003048.1.mrna1;Target=FBgn0003048.1 5632 6031 +
Chr1	stalkie_big_nohaplotig	CDS	122296319	122296479	.	-	2	Parent=FBgn0003048.1.mrna1;Target=FBgn0003048.1 5471 5631 +
Chr1	stalkie_big_nohaplotig	CDS	122296550	122297734	.	-	2	Parent=FBgn0003048.1.mrna1;Target=FBgn0003048.1 4286 5470 +
Chr1	stalkie_big_nohaplotig	CDS	122297799	122300648	.	-	2	Parent=FBgn0003048.1.mrna1;Target=FBgn0003048.1 1436 4285 +
Chr1	stalkie_big_nohaplotig	CDS	122300718	122301623	.	-	2	Parent=FBgn0003048.1.mrna1;Target=FBgn0003048.1 530 1435 +
Chr1	stalkie_big_nohaplotig	CDS	122301686	122301807	.	-	1	Parent=FBgn0003048.1.mrna1;Target=FBgn0003048.1 408 529 +
Chr1	stalkie_big_nohaplotig	CDS	122301861	122302036	.	-	0	Parent=FBgn0003048.1.mrna1;Target=FBgn0003048.1 232 407 +
Chr1	stalkie_big_nohaplotig	CDS	122302157	122302387	.	-	0	Parent=FBgn0003048.1.mrna1;Target=FBgn0003048.1 1 231 +
Chr1	gffcl	locus	122322456	122606747	.	+	.	ID=RLOC_00010713;geneIDs=ORF2066.path1,comp161532_c0_seq1.path1;transcripts=ORF2066.mrna1,comp161532_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122322456	122606747	.	+	.	ID=ORF2066.mrna1;geneID=ORF2066.path1;Name=ORF2066;Dir=sensecoverage=97.6;identity=99.6;matches=901;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010713
Chr1	stalkie_big_nohaplotig	exon	122322456	122322666	99	+	.	Parent=ORF2066.mrna1;Target=ORF2066 1 211 +
Chr1	stalkie_big_nohaplotig	exon	122325576	122325933	99	+	.	Parent=ORF2066.mrna1;Target=ORF2066 212 569 +
Chr1	stalkie_big_nohaplotig	exon	122334240	122334293	100	+	.	Parent=ORF2066.mrna1;Target=ORF2066 570 623 +
Chr1	stalkie_big_nohaplotig	exon	122606466	122606747	100	+	.	Parent=ORF2066.mrna1;Target=ORF2066 624 905 +
Chr1	stalkie_big_nohaplotig	CDS	122322456	122322666	.	+	0	Parent=ORF2066.mrna1;Target=ORF2066 1 211 +
Chr1	stalkie_big_nohaplotig	CDS	122325576	122325933	.	+	2	Parent=ORF2066.mrna1;Target=ORF2066 212 569 +
Chr1	stalkie_big_nohaplotig	CDS	122334240	122334293	.	+	1	Parent=ORF2066.mrna1;Target=ORF2066 570 623 +
Chr1	stalkie_big_nohaplotig	CDS	122606466	122606745	.	+	1	Parent=ORF2066.mrna1;Target=ORF2066 624 903 +
Chr1	stalkie_big_nohaplotig	mRNA	122353870	122606747	.	+	.	ID=comp161532_c0_seq1.mrna1;geneID=comp161532_c0_seq1.path1;Name=comp161532_c0_seq1;Dir=sensecoverage=98.2;identity=98.7;matches=2129;mismatches=12;indels=17;unknowns=0;Target=comp161532_c0_seq1 886 1470 +;locus=RLOC_00010713
Chr1	stalkie_big_nohaplotig	exon	122353870	122355736	98	+	.	Parent=comp161532_c0_seq1.mrna1;Target=comp161532_c0_seq1 17 1884 +
Chr1	stalkie_big_nohaplotig	exon	122606466	122606747	100	+	.	Parent=comp161532_c0_seq1.mrna1;Target=comp161532_c0_seq1 1885 2166 +
Chr1	stalkie_big_nohaplotig	CDS	122354739	122355322	.	+	0	Parent=comp161532_c0_seq1.mrna1
Chr1	gffcl	locus	122384660	122393814	.	+	.	ID=RLOC_00010714;geneIDs=comp152489_c0_seq1.path1,comp158042_c0_seq1.path1;transcripts=comp158042_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122384660	122393054	.	+	.	ID=comp158042_c0_seq1.mrna1;geneID=comp158042_c0_seq1.path1;Name=comp158042_c0_seq1;Dir=indeterminatecoverage=94.6;identity=97.6;matches=946;mismatches=14;indels=9;unknowns=0;Target=comp158042_c0_seq1 497 489 .;locus=RLOC_00010714
Chr1	stalkie_big_nohaplotig	exon	122384660	122384662	100	+	.	Parent=comp158042_c0_seq1.mrna1;Target=comp158042_c0_seq1 42 40 .
Chr1	stalkie_big_nohaplotig	exon	122392097	122393054	97	+	.	Parent=comp158042_c0_seq1.mrna1;Target=comp158042_c0_seq1 1007 43 .
Chr1	stalkie_big_nohaplotig	CDS	122392537	122392545	.	+	0	Parent=comp158042_c0_seq1.mrna1
Chr1	gffcl	locus	122388654	122389694	.	+	.	ID=RLOC_00010715;geneIDs=comp150827_c0_seq1.path1;transcripts=comp150827_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122388654	122389694	.	+	.	ID=comp150827_c0_seq1.mrna1;geneID=comp150827_c0_seq1.path1;Name=comp150827_c0_seq1;Dir=indeterminatecoverage=97.1;identity=95.9;matches=1006;mismatches=10;indels=33;unknowns=0;Target=comp150827_c0_seq1 1055 32 .;CDS_Target=comp150827_c0_seq1 865 800 .;locus=RLOC_00010715
Chr1	stalkie_big_nohaplotig	exon	122388654	122389694	95	+	.	Parent=comp150827_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122389439	122389504	.	+	0	Parent=comp150827_c0_seq1.mrna1
Chr1	gffcl	locus	122391791	122392026	.	-	.	ID=RLOC_00010716;geneIDs=comp118441_c0_seq1.path1;transcripts=comp118441_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122391791	122392026	.	-	.	ID=comp118441_c0_seq1.mrna1;geneID=comp118441_c0_seq1.path1;Name=comp118441_c0_seq1;Dir=indeterminatecoverage=87.0;identity=99.6;matches=235;mismatches=0;indels=1;unknowns=0;Target=comp118441_c0_seq1 269 35 .;CDS_Target=comp118441_c0_seq1 214 137 .;locus=RLOC_00010716
Chr1	stalkie_big_nohaplotig	exon	122391791	122392026	99	-	.	Parent=comp118441_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122391847	122391924	.	-	0	Parent=comp118441_c0_seq1.mrna1
Chr1	gffcl	locus	122394034	122413238	.	-	.	ID=RLOC_00010717;geneIDs=FBgn0003969.1.path1;transcripts=FBgn0003969.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122394034	122413238	.	-	.	ID=FBgn0003969.1.mrna1;geneID=FBgn0003969.1.path1;Name=FBgn0003969.1;Dir=sensecoverage=100.0;identity=99.8;matches=2859;mismatches=6;indels=0;unknowns=0;locus=RLOC_00010717
Chr1	stalkie_big_nohaplotig	exon	122394034	122394179	97	-	.	Parent=FBgn0003969.1.mrna1;Target=FBgn0003969.1 2720 2865 +
Chr1	stalkie_big_nohaplotig	exon	122395219	122395369	100	-	.	Parent=FBgn0003969.1.mrna1;Target=FBgn0003969.1 2569 2719 +
Chr1	stalkie_big_nohaplotig	exon	122395422	122396328	99	-	.	Parent=FBgn0003969.1.mrna1;Target=FBgn0003969.1 1662 2568 +
Chr1	stalkie_big_nohaplotig	exon	122396396	122397033	100	-	.	Parent=FBgn0003969.1.mrna1;Target=FBgn0003969.1 1024 1661 +
Chr1	stalkie_big_nohaplotig	exon	122397105	122397316	99	-	.	Parent=FBgn0003969.1.mrna1;Target=FBgn0003969.1 812 1023 +
Chr1	stalkie_big_nohaplotig	exon	122397402	122397811	100	-	.	Parent=FBgn0003969.1.mrna1;Target=FBgn0003969.1 402 811 +
Chr1	stalkie_big_nohaplotig	exon	122397891	122397963	100	-	.	Parent=FBgn0003969.1.mrna1;Target=FBgn0003969.1 329 401 +
Chr1	stalkie_big_nohaplotig	exon	122398029	122398142	100	-	.	Parent=FBgn0003969.1.mrna1;Target=FBgn0003969.1 215 328 +
Chr1	stalkie_big_nohaplotig	exon	122413025	122413238	100	-	.	Parent=FBgn0003969.1.mrna1;Target=FBgn0003969.1 1 214 +
Chr1	stalkie_big_nohaplotig	CDS	122394034	122394179	.	-	2	Parent=FBgn0003969.1.mrna1;Target=FBgn0003969.1 2720 2865 +
Chr1	stalkie_big_nohaplotig	CDS	122395219	122395369	.	-	0	Parent=FBgn0003969.1.mrna1;Target=FBgn0003969.1 2569 2719 +
Chr1	stalkie_big_nohaplotig	CDS	122395422	122396328	.	-	1	Parent=FBgn0003969.1.mrna1;Target=FBgn0003969.1 1662 2568 +
Chr1	stalkie_big_nohaplotig	CDS	122396396	122397033	.	-	0	Parent=FBgn0003969.1.mrna1;Target=FBgn0003969.1 1024 1661 +
Chr1	stalkie_big_nohaplotig	CDS	122397105	122397316	.	-	2	Parent=FBgn0003969.1.mrna1;Target=FBgn0003969.1 812 1023 +
Chr1	stalkie_big_nohaplotig	CDS	122397402	122397811	.	-	1	Parent=FBgn0003969.1.mrna1;Target=FBgn0003969.1 402 811 +
Chr1	stalkie_big_nohaplotig	CDS	122397891	122397963	.	-	2	Parent=FBgn0003969.1.mrna1;Target=FBgn0003969.1 329 401 +
Chr1	stalkie_big_nohaplotig	CDS	122398029	122398142	.	-	2	Parent=FBgn0003969.1.mrna1;Target=FBgn0003969.1 215 328 +
Chr1	stalkie_big_nohaplotig	CDS	122413025	122413238	.	-	0	Parent=FBgn0003969.1.mrna1;Target=FBgn0003969.1 1 214 +
Chr1	gffcl	locus	122423893	122450851	.	-	.	ID=RLOC_00010718;geneIDs=FBgn0052813.1.path1;transcripts=FBgn0052813.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122423893	122450851	.	-	.	ID=FBgn0052813.1.mrna1;geneID=FBgn0052813.1.path1;Name=FBgn0052813.1;Dir=sensecoverage=100.0;identity=99.8;matches=1461;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010718
Chr1	stalkie_big_nohaplotig	exon	122423893	122424792	99	-	.	Parent=FBgn0052813.1.mrna1;Target=FBgn0052813.1 565 1464 +
Chr1	stalkie_big_nohaplotig	exon	122427042	122427462	100	-	.	Parent=FBgn0052813.1.mrna1;Target=FBgn0052813.1 144 564 +
Chr1	stalkie_big_nohaplotig	exon	122450709	122450851	99	-	.	Parent=FBgn0052813.1.mrna1;Target=FBgn0052813.1 1 143 +
Chr1	stalkie_big_nohaplotig	CDS	122423893	122424792	.	-	0	Parent=FBgn0052813.1.mrna1;Target=FBgn0052813.1 565 1464 +
Chr1	stalkie_big_nohaplotig	CDS	122427042	122427462	.	-	1	Parent=FBgn0052813.1.mrna1;Target=FBgn0052813.1 144 564 +
Chr1	stalkie_big_nohaplotig	CDS	122450709	122450851	.	-	0	Parent=FBgn0052813.1.mrna1;Target=FBgn0052813.1 1 143 +
Chr1	gffcl	locus	122442508	122442804	.	+	.	ID=RLOC_00010719;geneIDs=comp155878_c0_seq1.path2;transcripts=comp155878_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	122442508	122442804	.	+	.	ID=comp155878_c0_seq1.mrna2;geneID=comp155878_c0_seq1.path2;Name=comp155878_c0_seq1;Dir=indeterminatecoverage=31.9;identity=100.0;matches=297;mismatches=0;indels=0;unknowns=0;Target=comp155878_c0_seq1 932 636 .;locus=RLOC_00010719
Chr1	stalkie_big_nohaplotig	exon	122442508	122442804	100	+	.	Parent=comp155878_c0_seq1.mrna2
Chr1	gffcl	locus	122459939	122462845	.	.	.	ID=RLOC_00010720;geneIDs=FBgn0029897.1.path1,comp153072_c1_seq1.path1;transcripts=FBgn0029897.1.mrna1,comp153072_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122459939	122462845	.	+	.	ID=FBgn0029897.1.mrna1;geneID=FBgn0029897.1.path1;Name=FBgn0029897.1;Dir=sensecoverage=100.0;identity=99.8;matches=557;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010720
Chr1	stalkie_big_nohaplotig	exon	122459939	122460016	100	+	.	Parent=FBgn0029897.1.mrna1;Target=FBgn0029897.1 1 78 +
Chr1	stalkie_big_nohaplotig	exon	122462366	122462845	99	+	.	Parent=FBgn0029897.1.mrna1;Target=FBgn0029897.1 79 558 +
Chr1	stalkie_big_nohaplotig	CDS	122459939	122460016	.	+	0	Parent=FBgn0029897.1.mrna1;Target=FBgn0029897.1 1 78 +
Chr1	stalkie_big_nohaplotig	CDS	122462366	122462845	.	+	0	Parent=FBgn0029897.1.mrna1;Target=FBgn0029897.1 79 558 +
Chr1	stalkie_big_nohaplotig	mRNA	122459993	122460928	.	-	.	ID=comp153072_c1_seq1.mrna1;geneID=comp153072_c1_seq1.path1;Name=comp153072_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=936;mismatches=0;indels=0;unknowns=0;Target=comp153072_c1_seq1 936 1 .;CDS_Target=comp153072_c1_seq1 185 45 .;locus=RLOC_00010720
Chr1	stalkie_big_nohaplotig	exon	122459993	122460928	100	-	.	Parent=comp153072_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122460744	122460884	.	-	0	Parent=comp153072_c1_seq1.mrna1
Chr1	gffcl	locus	122466763	122475322	.	+	.	ID=RLOC_00010721;geneIDs=comp146478_c0_seq1.path1;transcripts=comp146478_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122466763	122475322	.	+	.	ID=comp146478_c0_seq1.mrna1;geneID=comp146478_c0_seq1.path1;Name=comp146478_c0_seq1;Dir=sensecoverage=94.0;identity=100.0;matches=331;mismatches=0;indels=0;unknowns=0;Target=comp146478_c0_seq1 215 331 +;locus=RLOC_00010721
Chr1	stalkie_big_nohaplotig	exon	122466763	122466851	100	+	.	Parent=comp146478_c0_seq1.mrna1;Target=comp146478_c0_seq1 1 89 +
Chr1	stalkie_big_nohaplotig	exon	122475081	122475322	100	+	.	Parent=comp146478_c0_seq1.mrna1;Target=comp146478_c0_seq1 90 331 +
Chr1	stalkie_big_nohaplotig	CDS	122475206	122475322	.	+	0	Parent=comp146478_c0_seq1.mrna1
Chr1	gffcl	locus	122480948	122482292	.	-	.	ID=RLOC_00010722;geneIDs=comp144270_c0_seq1.path1;transcripts=comp144270_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122480948	122482292	.	-	.	ID=comp144270_c0_seq1.mrna1;geneID=comp144270_c0_seq1.path1;Name=comp144270_c0_seq1;Dir=antisensecoverage=85.8;identity=99.0;matches=514;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010722
Chr1	stalkie_big_nohaplotig	exon	122480948	122481269	98	-	.	Parent=comp144270_c0_seq1.mrna1;Target=comp144270_c0_seq1 62 383 -
Chr1	stalkie_big_nohaplotig	exon	122482096	122482292	100	-	.	Parent=comp144270_c0_seq1.mrna1;Target=comp144270_c0_seq1 384 580 -
Chr1	stalkie_big_nohaplotig	CDS	122481155	122481269	.	-	1	Parent=comp144270_c0_seq1.mrna1;Target=comp144270_c0_seq1 269 383 .
Chr1	stalkie_big_nohaplotig	CDS	122482096	122482292	.	-	0	Parent=comp144270_c0_seq1.mrna1;Target=comp144270_c0_seq1 384 580 .
Chr1	gffcl	locus	122499855	122500973	.	-	.	ID=RLOC_00010723;geneIDs=comp137664_c0_seq1.path1;transcripts=comp137664_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122499855	122500973	.	-	.	ID=comp137664_c0_seq1.mrna1;geneID=comp137664_c0_seq1.path1;Name=comp137664_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1117;mismatches=2;indels=0;unknowns=0;Target=comp137664_c0_seq1 1119 1 .;CDS_Target=comp137664_c0_seq1 386 240 .;locus=RLOC_00010723
Chr1	stalkie_big_nohaplotig	exon	122499855	122500973	99	-	.	Parent=comp137664_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122500588	122500734	.	-	0	Parent=comp137664_c0_seq1.mrna1
Chr1	gffcl	locus	122523873	122529668	.	.	.	ID=RLOC_00010724;geneIDs=FBgn0029896.1.path1,comp158616_c0_seq1.path1;transcripts=FBgn0029896.1.mrna1,comp158616_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122523873	122529668	.	+	.	ID=FBgn0029896.1.mrna1;geneID=FBgn0029896.1.path1;Name=FBgn0029896.1;Dir=sensecoverage=100.0;identity=99.9;matches=1909;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010724
Chr1	stalkie_big_nohaplotig	exon	122523873	122524008	99	+	.	Parent=FBgn0029896.1.mrna1;Target=FBgn0029896.1 1 136 +
Chr1	stalkie_big_nohaplotig	exon	122525103	122525733	100	+	.	Parent=FBgn0029896.1.mrna1;Target=FBgn0029896.1 137 767 +
Chr1	stalkie_big_nohaplotig	exon	122528525	122529668	99	+	.	Parent=FBgn0029896.1.mrna1;Target=FBgn0029896.1 768 1911 +
Chr1	stalkie_big_nohaplotig	CDS	122523873	122524008	.	+	0	Parent=FBgn0029896.1.mrna1;Target=FBgn0029896.1 1 136 +
Chr1	stalkie_big_nohaplotig	CDS	122525103	122525733	.	+	2	Parent=FBgn0029896.1.mrna1;Target=FBgn0029896.1 137 767 +
Chr1	stalkie_big_nohaplotig	CDS	122528525	122529668	.	+	1	Parent=FBgn0029896.1.mrna1;Target=FBgn0029896.1 768 1911 +
Chr1	stalkie_big_nohaplotig	mRNA	122525711	122528518	.	-	.	ID=comp158616_c0_seq1.mrna1;geneID=comp158616_c0_seq1.path1;Name=comp158616_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=2759;mismatches=41;indels=52;unknowns=0;Target=comp158616_c0_seq1 2844 1 .;CDS_Target=comp158616_c0_seq1 2585 2433 .;locus=RLOC_00010724
Chr1	stalkie_big_nohaplotig	exon	122525711	122528518	96	-	.	Parent=comp158616_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122525971	122526122	.	-	0	Parent=comp158616_c0_seq1.mrna1
Chr1	gffcl	locus	122532179	122532482	.	-	.	ID=RLOC_00010725;geneIDs=comp515763_c0_seq1.path1;transcripts=comp515763_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122532179	122532482	.	-	.	ID=comp515763_c0_seq1.mrna1;geneID=comp515763_c0_seq1.path1;Name=comp515763_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=304;mismatches=0;indels=0;unknowns=0;Target=comp515763_c0_seq1 304 1 .;CDS_Target=comp515763_c0_seq1 284 201 .;locus=RLOC_00010725
Chr1	stalkie_big_nohaplotig	exon	122532179	122532482	100	-	.	Parent=comp515763_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122532199	122532282	.	-	0	Parent=comp515763_c0_seq1.mrna1
Chr1	gffcl	locus	122618357	122638058	.	+	.	ID=RLOC_00010727;geneIDs=Dv_FBgn0203178.1.path1;transcripts=Dv_FBgn0203178.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122618357	122638058	.	+	.	ID=Dv_FBgn0203178.1.mrna1;geneID=Dv_FBgn0203178.1.path1;Name=Dv_FBgn0203178.1;Dir=sensecoverage=100.0;identity=99.6;matches=1624;mismatches=6;indels=0;unknowns=2;locus=RLOC_00010727
Chr1	stalkie_big_nohaplotig	exon	122618357	122618550	100	+	.	Parent=Dv_FBgn0203178.1.mrna1;Target=Dv_FBgn0203178.1 1 194 +
Chr1	stalkie_big_nohaplotig	exon	122625591	122625856	100	+	.	Parent=Dv_FBgn0203178.1.mrna1;Target=Dv_FBgn0203178.1 195 460 +
Chr1	stalkie_big_nohaplotig	exon	122627044	122627147	100	+	.	Parent=Dv_FBgn0203178.1.mrna1;Target=Dv_FBgn0203178.1 461 564 +
Chr1	stalkie_big_nohaplotig	exon	122627211	122627625	99	+	.	Parent=Dv_FBgn0203178.1.mrna1;Target=Dv_FBgn0203178.1 565 979 +
Chr1	stalkie_big_nohaplotig	exon	122627691	122628139	99	+	.	Parent=Dv_FBgn0203178.1.mrna1;Target=Dv_FBgn0203178.1 980 1428 +
Chr1	stalkie_big_nohaplotig	exon	122628201	122628320	100	+	.	Parent=Dv_FBgn0203178.1.mrna1;Target=Dv_FBgn0203178.1 1429 1548 +
Chr1	stalkie_big_nohaplotig	exon	122637975	122638058	100	+	.	Parent=Dv_FBgn0203178.1.mrna1;Target=Dv_FBgn0203178.1 1549 1632 +
Chr1	stalkie_big_nohaplotig	CDS	122618357	122618550	.	+	0	Parent=Dv_FBgn0203178.1.mrna1;Target=Dv_FBgn0203178.1 1 194 +
Chr1	stalkie_big_nohaplotig	CDS	122625591	122625856	.	+	1	Parent=Dv_FBgn0203178.1.mrna1;Target=Dv_FBgn0203178.1 195 460 +
Chr1	stalkie_big_nohaplotig	CDS	122627044	122627147	.	+	2	Parent=Dv_FBgn0203178.1.mrna1;Target=Dv_FBgn0203178.1 461 564 +
Chr1	stalkie_big_nohaplotig	CDS	122627211	122627625	.	+	0	Parent=Dv_FBgn0203178.1.mrna1;Target=Dv_FBgn0203178.1 565 979 +
Chr1	stalkie_big_nohaplotig	CDS	122627691	122628139	.	+	2	Parent=Dv_FBgn0203178.1.mrna1;Target=Dv_FBgn0203178.1 980 1428 +
Chr1	stalkie_big_nohaplotig	CDS	122628201	122628320	.	+	0	Parent=Dv_FBgn0203178.1.mrna1;Target=Dv_FBgn0203178.1 1429 1548 +
Chr1	stalkie_big_nohaplotig	CDS	122637975	122638058	.	+	0	Parent=Dv_FBgn0203178.1.mrna1;Target=Dv_FBgn0203178.1 1549 1632 +
Chr1	gffcl	locus	122635109	122636022	.	-	.	ID=RLOC_00010728;geneIDs=ORF2081.path1;transcripts=ORF2081.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122635109	122636022	.	-	.	ID=ORF2081.mrna1;geneID=ORF2081.path1;Name=ORF2081;Dir=indeterminatecoverage=98.7;identity=97.2;matches=888;mismatches=24;indels=2;unknowns=0;Target=ORF2081 924 13 .;CDS_Target=ORF2081 131 60 .;locus=RLOC_00010728
Chr1	stalkie_big_nohaplotig	exon	122635109	122636022	97	-	.	Parent=ORF2081.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122635902	122635975	.	-	0	Parent=ORF2081.mrna1
Chr1	gffcl	locus	122641294	122651832	.	+	.	ID=RLOC_00010729;geneIDs=FBgn0263993.3.path2;transcripts=FBgn0263993.3.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	122641294	122651832	.	+	.	ID=FBgn0263993.3.mrna2;geneID=FBgn0263993.3.path2;Name=FBgn0263993.3;Dir=sensecoverage=67.5;identity=99.9;matches=2235;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010729
Chr1	stalkie_big_nohaplotig	exon	122641294	122641602	100	+	.	Parent=FBgn0263993.3.mrna2;Target=FBgn0263993.3 1078 1386 +
Chr1	stalkie_big_nohaplotig	exon	122641748	122641834	100	+	.	Parent=FBgn0263993.3.mrna2;Target=FBgn0263993.3 1387 1473 +
Chr1	stalkie_big_nohaplotig	exon	122646490	122646680	100	+	.	Parent=FBgn0263993.3.mrna2;Target=FBgn0263993.3 1474 1664 +
Chr1	stalkie_big_nohaplotig	exon	122650120	122651619	99	+	.	Parent=FBgn0263993.3.mrna2;Target=FBgn0263993.3 1665 3164 +
Chr1	stalkie_big_nohaplotig	exon	122651682	122651832	100	+	.	Parent=FBgn0263993.3.mrna2;Target=FBgn0263993.3 3165 3315 +
Chr1	stalkie_big_nohaplotig	CDS	122641294	122641602	.	+	0	Parent=FBgn0263993.3.mrna2;Target=FBgn0263993.3 1078 1386 +
Chr1	stalkie_big_nohaplotig	CDS	122641748	122641834	.	+	0	Parent=FBgn0263993.3.mrna2;Target=FBgn0263993.3 1387 1473 +
Chr1	stalkie_big_nohaplotig	CDS	122646490	122646680	.	+	0	Parent=FBgn0263993.3.mrna2;Target=FBgn0263993.3 1474 1664 +
Chr1	stalkie_big_nohaplotig	CDS	122650120	122651619	.	+	1	Parent=FBgn0263993.3.mrna2;Target=FBgn0263993.3 1665 3164 +
Chr1	stalkie_big_nohaplotig	CDS	122651682	122651832	.	+	1	Parent=FBgn0263993.3.mrna2;Target=FBgn0263993.3 3165 3315 +
Chr1	gffcl	locus	122647789	122648448	.	-	.	ID=RLOC_00010730;geneIDs=comp152547_c0_seq1.path1;transcripts=comp152547_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122647789	122648448	.	-	.	ID=comp152547_c0_seq1.mrna1;geneID=comp152547_c0_seq1.path1;Name=comp152547_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=648;mismatches=10;indels=5;unknowns=0;Target=comp152547_c0_seq1 661 1 .;CDS_Target=comp152547_c0_seq1 297 187 .;locus=RLOC_00010730
Chr1	stalkie_big_nohaplotig	exon	122647789	122648448	97	-	.	Parent=comp152547_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122648155	122648265	.	-	0	Parent=comp152547_c0_seq1.mrna1
Chr1	gffcl	locus	122673083	122673712	.	-	.	ID=RLOC_00010731;geneIDs=comp151113_c2_seq1.path1;transcripts=comp151113_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122673083	122673712	.	-	.	ID=comp151113_c2_seq1.mrna1;geneID=comp151113_c2_seq1.path1;Name=comp151113_c2_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=622;mismatches=7;indels=3;unknowns=0;Target=comp151113_c2_seq1 631 1 .;CDS_Target=comp151113_c2_seq1 631 437 .;locus=RLOC_00010731
Chr1	stalkie_big_nohaplotig	exon	122673083	122673712	98	-	.	Parent=comp151113_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122673083	122673275	.	-	0	Parent=comp151113_c2_seq1.mrna1
Chr1	gffcl	locus	122678350	122679882	.	+	.	ID=RLOC_00010732;geneIDs=FBgn0030719.1.path1;transcripts=FBgn0030719.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122678350	122679882	.	+	.	ID=FBgn0030719.1.mrna1;geneID=FBgn0030719.1.path1;Name=FBgn0030719.1;Dir=sensecoverage=100.0;identity=99.9;matches=1394;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010732
Chr1	stalkie_big_nohaplotig	exon	122678350	122678571	99	+	.	Parent=FBgn0030719.1.mrna1;Target=FBgn0030719.1 1 222 +
Chr1	stalkie_big_nohaplotig	exon	122678643	122679116	100	+	.	Parent=FBgn0030719.1.mrna1;Target=FBgn0030719.1 223 696 +
Chr1	stalkie_big_nohaplotig	exon	122679184	122679882	100	+	.	Parent=FBgn0030719.1.mrna1;Target=FBgn0030719.1 697 1395 +
Chr1	stalkie_big_nohaplotig	CDS	122678350	122678571	.	+	0	Parent=FBgn0030719.1.mrna1;Target=FBgn0030719.1 1 222 +
Chr1	stalkie_big_nohaplotig	CDS	122678643	122679116	.	+	0	Parent=FBgn0030719.1.mrna1;Target=FBgn0030719.1 223 696 +
Chr1	stalkie_big_nohaplotig	CDS	122679184	122679882	.	+	0	Parent=FBgn0030719.1.mrna1;Target=FBgn0030719.1 697 1395 +
Chr1	gffcl	locus	122683825	122692419	.	+	.	ID=RLOC_00010733;geneIDs=FBgn0032779.2.path1;transcripts=FBgn0032779.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122683825	122692419	.	+	.	ID=FBgn0032779.2.mrna1;geneID=FBgn0032779.2.path1;Name=FBgn0032779.2;Dir=sensecoverage=100.0;identity=99.1;matches=1832;mismatches=15;indels=1;unknowns=0;locus=RLOC_00010733
Chr1	stalkie_big_nohaplotig	exon	122683825	122683874	100	+	.	Parent=FBgn0032779.2.mrna1;Target=FBgn0032779.2 1 50 +
Chr1	stalkie_big_nohaplotig	exon	122690059	122690598	98	+	.	Parent=FBgn0032779.2.mrna1;Target=FBgn0032779.2 51 591 +
Chr1	stalkie_big_nohaplotig	exon	122690667	122691032	99	+	.	Parent=FBgn0032779.2.mrna1;Target=FBgn0032779.2 592 957 +
Chr1	stalkie_big_nohaplotig	exon	122691252	122691465	100	+	.	Parent=FBgn0032779.2.mrna1;Target=FBgn0032779.2 958 1171 +
Chr1	stalkie_big_nohaplotig	exon	122691599	122691842	99	+	.	Parent=FBgn0032779.2.mrna1;Target=FBgn0032779.2 1172 1415 +
Chr1	stalkie_big_nohaplotig	exon	122691913	122692214	98	+	.	Parent=FBgn0032779.2.mrna1;Target=FBgn0032779.2 1416 1717 +
Chr1	stalkie_big_nohaplotig	exon	122692289	122692419	100	+	.	Parent=FBgn0032779.2.mrna1;Target=FBgn0032779.2 1718 1848 +
Chr1	stalkie_big_nohaplotig	CDS	122683827	122683874	.	+	0	Parent=FBgn0032779.2.mrna1;Target=FBgn0032779.2 3 50 +
Chr1	stalkie_big_nohaplotig	CDS	122690059	122690099	.	+	0	Parent=FBgn0032779.2.mrna1;Target=FBgn0032779.2 51 92 +
Chr1	gffcl	locus	122706492	122739572	.	+	.	ID=RLOC_00010734;geneIDs=FBgn0028480.1.path1;transcripts=FBgn0028480.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122706492	122739572	.	+	.	ID=FBgn0028480.1.mrna1;geneID=FBgn0028480.1.path1;Name=FBgn0028480.1;Dir=sensecoverage=100.0;identity=99.7;matches=1415;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010734
Chr1	stalkie_big_nohaplotig	exon	122706492	122706829	98	+	.	Parent=FBgn0028480.1.mrna1;Target=FBgn0028480.1 1 338 +
Chr1	stalkie_big_nohaplotig	exon	122736383	122736890	100	+	.	Parent=FBgn0028480.1.mrna1;Target=FBgn0028480.1 339 846 +
Chr1	stalkie_big_nohaplotig	exon	122736950	122737177	100	+	.	Parent=FBgn0028480.1.mrna1;Target=FBgn0028480.1 847 1074 +
Chr1	stalkie_big_nohaplotig	exon	122737243	122737341	100	+	.	Parent=FBgn0028480.1.mrna1;Target=FBgn0028480.1 1075 1173 +
Chr1	stalkie_big_nohaplotig	exon	122739327	122739572	100	+	.	Parent=FBgn0028480.1.mrna1;Target=FBgn0028480.1 1174 1419 +
Chr1	stalkie_big_nohaplotig	CDS	122706492	122706829	.	+	0	Parent=FBgn0028480.1.mrna1;Target=FBgn0028480.1 1 338 +
Chr1	stalkie_big_nohaplotig	CDS	122736383	122736890	.	+	1	Parent=FBgn0028480.1.mrna1;Target=FBgn0028480.1 339 846 +
Chr1	stalkie_big_nohaplotig	CDS	122736950	122737177	.	+	0	Parent=FBgn0028480.1.mrna1;Target=FBgn0028480.1 847 1074 +
Chr1	stalkie_big_nohaplotig	CDS	122737243	122737341	.	+	0	Parent=FBgn0028480.1.mrna1;Target=FBgn0028480.1 1075 1173 +
Chr1	stalkie_big_nohaplotig	CDS	122739327	122739572	.	+	0	Parent=FBgn0028480.1.mrna1;Target=FBgn0028480.1 1174 1419 +
Chr1	gffcl	locus	122716527	122718656	.	-	.	ID=RLOC_00010735;geneIDs=ORF293.path1;transcripts=ORF293.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122716527	122718656	.	-	.	ID=ORF293.mrna1;geneID=ORF293.path1;Name=ORF293;Dir=indeterminatecoverage=100.0;identity=99.1;matches=2110;mismatches=14;indels=6;unknowns=0;Target=ORF293 2124 1 .;locus=RLOC_00010735
Chr1	stalkie_big_nohaplotig	exon	122716527	122718656	99	-	.	Parent=ORF293.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122716527	122718656	.	-	0	Parent=ORF293.mrna1
Chr1	gffcl	locus	122722157	122723299	.	-	.	ID=RLOC_00010736;geneIDs=ORF1312.path1;transcripts=ORF1312.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122722157	122723299	.	-	.	ID=ORF1312.mrna1;geneID=ORF1312.path1;Name=ORF1312;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1136;mismatches=7;indels=0;unknowns=0;Target=ORF1312 1143 1 .;locus=RLOC_00010736
Chr1	stalkie_big_nohaplotig	exon	122722157	122723299	99	-	.	Parent=ORF1312.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122722157	122723299	.	-	0	Parent=ORF1312.mrna1
Chr1	gffcl	locus	122725054	122726244	.	-	.	ID=RLOC_00010737;geneIDs=ORF1197.path1;transcripts=ORF1197.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122725054	122726244	.	-	.	ID=ORF1197.mrna1;geneID=ORF1197.path1;Name=ORF1197;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1186;mismatches=5;indels=0;unknowns=0;Target=ORF1197 1191 1 .;locus=RLOC_00010737
Chr1	stalkie_big_nohaplotig	exon	122725054	122726244	99	-	.	Parent=ORF1197.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122725054	122726244	.	-	0	Parent=ORF1197.mrna1
Chr1	gffcl	locus	122731120	122733993	.	-	.	ID=RLOC_00010738;geneIDs=ORF130.path1;transcripts=ORF130.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122731120	122733993	.	-	.	ID=ORF130.mrna1;geneID=ORF130.path1;Name=ORF130;Dir=indeterminatecoverage=100.0;identity=99.5;matches=2859;mismatches=15;indels=0;unknowns=0;Target=ORF130 2874 1 .;locus=RLOC_00010738
Chr1	stalkie_big_nohaplotig	exon	122731120	122733993	99	-	.	Parent=ORF130.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122731120	122733993	.	-	0	Parent=ORF130.mrna1
Chr1	gffcl	locus	122738885	122739308	.	+	.	ID=RLOC_00010739;geneIDs=comp154179_c0_seq1.path1;transcripts=comp154179_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122738885	122739308	.	+	.	ID=comp154179_c0_seq1.mrna1;geneID=comp154179_c0_seq1.path1;Name=comp154179_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.2;matches=404;mismatches=18;indels=16;unknowns=0;Target=comp154179_c0_seq1 436 1 .;CDS_Target=comp154179_c0_seq1 279 166 .;locus=RLOC_00010739
Chr1	stalkie_big_nohaplotig	exon	122738885	122739308	92	+	.	Parent=comp154179_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122739037	122739152	.	+	0	Parent=comp154179_c0_seq1.mrna1
Chr1	gffcl	locus	122741281	122741926	.	-	.	ID=RLOC_00010740;geneIDs=comp116387_c0_seq1.path1,comp134931_c0_seq1.path1;transcripts=comp134931_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122741281	122741685	.	-	.	ID=comp134931_c0_seq1.mrna1;geneID=comp134931_c0_seq1.path1;Name=comp134931_c0_seq1;Dir=indeterminatecoverage=98.8;identity=100.0;matches=405;mismatches=0;indels=0;unknowns=0;Target=comp134931_c0_seq1 406 2 .;CDS_Target=comp134931_c0_seq1 95 3 .;locus=RLOC_00010740
Chr1	stalkie_big_nohaplotig	exon	122741281	122741685	100	-	.	Parent=comp134931_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122741592	122741684	.	-	0	Parent=comp134931_c0_seq1.mrna1
Chr1	gffcl	locus	122741985	122742577	.	-	.	ID=RLOC_00010741;geneIDs=comp157550_c0_seq1.path1;transcripts=comp157550_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122741985	122742577	.	-	.	ID=comp157550_c0_seq1.mrna1;geneID=comp157550_c0_seq1.path1;Name=comp157550_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=586;mismatches=7;indels=0;unknowns=0;Target=comp157550_c0_seq1 593 1 .;CDS_Target=comp157550_c0_seq1 593 501 .;locus=RLOC_00010741
Chr1	stalkie_big_nohaplotig	exon	122741985	122742577	98	-	.	Parent=comp157550_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122741985	122742077	.	-	0	Parent=comp157550_c0_seq1.mrna1
Chr1	gffcl	locus	122746534	122840757	.	+	.	ID=RLOC_00010742;geneIDs=FBgn0005410.1.path1,comp163466_c1_seq1.path1;transcripts=comp163466_c1_seq1.mrna1,FBgn0005410.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122746534	122840757	.	+	.	ID=comp163466_c1_seq1.mrna1;geneID=comp163466_c1_seq1.path1;Name=comp163466_c1_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=5175;mismatches=16;indels=1;unknowns=0;locus=RLOC_00010742
Chr1	stalkie_big_nohaplotig	exon	122746534	122747195	99	+	.	Parent=comp163466_c1_seq1.mrna1;Target=comp163466_c1_seq1 3 664 +
Chr1	stalkie_big_nohaplotig	exon	122802420	122802516	100	+	.	Parent=comp163466_c1_seq1.mrna1;Target=comp163466_c1_seq1 665 761 +
Chr1	stalkie_big_nohaplotig	exon	122823513	122823659	98	+	.	Parent=comp163466_c1_seq1.mrna1;Target=comp163466_c1_seq1 762 909 +
Chr1	stalkie_big_nohaplotig	exon	122828272	122828456	100	+	.	Parent=comp163466_c1_seq1.mrna1;Target=comp163466_c1_seq1 910 1094 +
Chr1	stalkie_big_nohaplotig	exon	122828514	122828601	100	+	.	Parent=comp163466_c1_seq1.mrna1;Target=comp163466_c1_seq1 1095 1182 +
Chr1	stalkie_big_nohaplotig	exon	122828684	122828893	98	+	.	Parent=comp163466_c1_seq1.mrna1;Target=comp163466_c1_seq1 1183 1392 +
Chr1	stalkie_big_nohaplotig	exon	122828959	122829134	100	+	.	Parent=comp163466_c1_seq1.mrna1;Target=comp163466_c1_seq1 1393 1568 +
Chr1	stalkie_big_nohaplotig	exon	122829197	122829603	100	+	.	Parent=comp163466_c1_seq1.mrna1;Target=comp163466_c1_seq1 1569 1975 +
Chr1	stalkie_big_nohaplotig	exon	122829682	122829835	100	+	.	Parent=comp163466_c1_seq1.mrna1;Target=comp163466_c1_seq1 1976 2129 +
Chr1	stalkie_big_nohaplotig	exon	122829898	122830178	100	+	.	Parent=comp163466_c1_seq1.mrna1;Target=comp163466_c1_seq1 2130 2410 +
Chr1	stalkie_big_nohaplotig	exon	122837673	122838169	100	+	.	Parent=comp163466_c1_seq1.mrna1;Target=comp163466_c1_seq1 2411 2907 +
Chr1	stalkie_big_nohaplotig	exon	122838230	122839258	99	+	.	Parent=comp163466_c1_seq1.mrna1;Target=comp163466_c1_seq1 2908 3936 +
Chr1	stalkie_big_nohaplotig	exon	122839322	122839460	100	+	.	Parent=comp163466_c1_seq1.mrna1;Target=comp163466_c1_seq1 3937 4075 +
Chr1	stalkie_big_nohaplotig	exon	122839576	122839924	99	+	.	Parent=comp163466_c1_seq1.mrna1;Target=comp163466_c1_seq1 4076 4424 +
Chr1	stalkie_big_nohaplotig	exon	122839988	122840757	99	+	.	Parent=comp163466_c1_seq1.mrna1;Target=comp163466_c1_seq1 4425 5194 +
Chr1	stalkie_big_nohaplotig	CDS	122747193	122747195	.	+	0	Parent=comp163466_c1_seq1.mrna1;Target=comp163466_c1_seq1 662 664 +
Chr1	stalkie_big_nohaplotig	CDS	122802420	122802516	.	+	0	Parent=comp163466_c1_seq1.mrna1;Target=comp163466_c1_seq1 665 761 +
Chr1	stalkie_big_nohaplotig	CDS	122823513	122823659	.	+	2	Parent=comp163466_c1_seq1.mrna1;Target=comp163466_c1_seq1 762 909 +
Chr1	stalkie_big_nohaplotig	CDS	122828272	122828293	.	+	2	Parent=comp163466_c1_seq1.mrna1;Target=comp163466_c1_seq1 910 931 +
Chr1	stalkie_big_nohaplotig	mRNA	122823585	122832792	.	+	.	ID=FBgn0005410.1.mrna1;geneID=FBgn0005410.1.path1;Name=FBgn0005410.1;Dir=sensecoverage=100.0;identity=99.7;matches=3811;mismatches=10;indels=1;unknowns=0;locus=RLOC_00010742
Chr1	stalkie_big_nohaplotig	exon	122823585	122823659	97	+	.	Parent=FBgn0005410.1.mrna1;Target=FBgn0005410.1 1 76 +
Chr1	stalkie_big_nohaplotig	exon	122828272	122828456	100	+	.	Parent=FBgn0005410.1.mrna1;Target=FBgn0005410.1 77 261 +
Chr1	stalkie_big_nohaplotig	exon	122828514	122828601	100	+	.	Parent=FBgn0005410.1.mrna1;Target=FBgn0005410.1 262 349 +
Chr1	stalkie_big_nohaplotig	exon	122828684	122828893	98	+	.	Parent=FBgn0005410.1.mrna1;Target=FBgn0005410.1 350 559 +
Chr1	stalkie_big_nohaplotig	exon	122828959	122829134	100	+	.	Parent=FBgn0005410.1.mrna1;Target=FBgn0005410.1 560 735 +
Chr1	stalkie_big_nohaplotig	exon	122829197	122829603	100	+	.	Parent=FBgn0005410.1.mrna1;Target=FBgn0005410.1 736 1142 +
Chr1	stalkie_big_nohaplotig	exon	122829682	122829835	100	+	.	Parent=FBgn0005410.1.mrna1;Target=FBgn0005410.1 1143 1296 +
Chr1	stalkie_big_nohaplotig	exon	122829898	122830178	100	+	.	Parent=FBgn0005410.1.mrna1;Target=FBgn0005410.1 1297 1577 +
Chr1	stalkie_big_nohaplotig	exon	122830247	122830743	100	+	.	Parent=FBgn0005410.1.mrna1;Target=FBgn0005410.1 1578 2074 +
Chr1	stalkie_big_nohaplotig	exon	122830804	122831832	99	+	.	Parent=FBgn0005410.1.mrna1;Target=FBgn0005410.1 2075 3103 +
Chr1	stalkie_big_nohaplotig	exon	122831896	122832034	100	+	.	Parent=FBgn0005410.1.mrna1;Target=FBgn0005410.1 3104 3242 +
Chr1	stalkie_big_nohaplotig	exon	122832150	122832498	99	+	.	Parent=FBgn0005410.1.mrna1;Target=FBgn0005410.1 3243 3591 +
Chr1	stalkie_big_nohaplotig	exon	122832562	122832792	99	+	.	Parent=FBgn0005410.1.mrna1;Target=FBgn0005410.1 3592 3822 +
Chr1	stalkie_big_nohaplotig	CDS	122823587	122823659	.	+	0	Parent=FBgn0005410.1.mrna1;Target=FBgn0005410.1 3 76 +
Chr1	stalkie_big_nohaplotig	CDS	122828272	122828293	.	+	2	Parent=FBgn0005410.1.mrna1;Target=FBgn0005410.1 77 98 +
Chr1	gffcl	locus	122753797	122755260	.	+	.	ID=RLOC_00010743;geneIDs=ORF746.path1;transcripts=ORF746.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122753797	122755260	.	+	.	ID=ORF746.mrna1;geneID=ORF746.path1;Name=ORF746;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1460;mismatches=4;indels=0;unknowns=0;Target=ORF746 1464 1 .;locus=RLOC_00010743
Chr1	stalkie_big_nohaplotig	exon	122753797	122755260	99	+	.	Parent=ORF746.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122753797	122755260	.	+	0	Parent=ORF746.mrna1
Chr1	gffcl	locus	122757257	122758753	.	+	.	ID=RLOC_00010744;geneIDs=ORF716.path1;transcripts=ORF716.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122757257	122758753	.	+	.	ID=ORF716.mrna1;geneID=ORF716.path1;Name=ORF716;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1485;mismatches=12;indels=0;unknowns=0;Target=ORF716 1497 1 .;locus=RLOC_00010744
Chr1	stalkie_big_nohaplotig	exon	122757257	122758753	99	+	.	Parent=ORF716.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122757257	122758753	.	+	0	Parent=ORF716.mrna1
Chr1	gffcl	locus	122790947	122792022	.	+	.	ID=RLOC_00010745;geneIDs=FBgn0263993.3.path1;transcripts=FBgn0263993.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122790947	122792022	.	+	.	ID=FBgn0263993.3.mrna1;geneID=FBgn0263993.3.path1;Name=FBgn0263993.3;Dir=indeterminatecoverage=32.5;identity=99.7;matches=1073;mismatches=3;indels=0;unknowns=0;Target=FBgn0263993.3 1077 2 .;CDS_Target=FBgn0263993.3 1077 4 .;locus=RLOC_00010745
Chr1	stalkie_big_nohaplotig	exon	122790947	122792022	99	+	.	Parent=FBgn0263993.3.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122790949	122792022	.	+	0	Parent=FBgn0263993.3.mrna1
Chr1	gffcl	locus	122807104	122807982	.	-	.	ID=RLOC_00010746;geneIDs=comp155532_c0_seq1.path1;transcripts=comp155532_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122807104	122807982	.	-	.	ID=comp155532_c0_seq1.mrna1;geneID=comp155532_c0_seq1.path1;Name=comp155532_c0_seq1;Dir=sensecoverage=100.0;identity=93.4;matches=718;mismatches=22;indels=29;unknowns=0;Target=comp155532_c0_seq1 538 627 +;locus=RLOC_00010746
Chr1	stalkie_big_nohaplotig	exon	122807104	122807344	88	-	.	Parent=comp155532_c0_seq1.mrna1;Target=comp155532_c0_seq1 519 740 +
Chr1	stalkie_big_nohaplotig	exon	122807455	122807982	95	-	.	Parent=comp155532_c0_seq1.mrna1;Target=comp155532_c0_seq1 1 518 +
Chr1	stalkie_big_nohaplotig	CDS	122807227	122807325	.	-	0	Parent=comp155532_c0_seq1.mrna1
Chr1	gffcl	locus	122863664	122864408	.	-	.	ID=RLOC_00010747;geneIDs=comp148817_c0_seq1.path1;transcripts=comp148817_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122863664	122864408	.	-	.	ID=comp148817_c0_seq1.mrna1;geneID=comp148817_c0_seq1.path1;Name=comp148817_c0_seq1;Dir=indeterminatecoverage=89.8;identity=98.9;matches=737;mismatches=8;indels=0;unknowns=0;Target=comp148817_c0_seq1 745 1 .;CDS_Target=comp148817_c0_seq1 690 139 .;locus=RLOC_00010747
Chr1	stalkie_big_nohaplotig	exon	122863664	122864408	98	-	.	Parent=comp148817_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122863719	122864270	.	-	0	Parent=comp148817_c0_seq1.mrna1
Chr1	gffcl	locus	122914274	122914634	.	+	.	ID=RLOC_00010748;geneIDs=comp145973_c0_seq1.path1;transcripts=comp145973_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122914274	122914634	.	+	.	ID=comp145973_c0_seq1.mrna1;geneID=comp145973_c0_seq1.path1;Name=comp145973_c0_seq1;Dir=antisensecoverage=94.6;identity=99.3;matches=278;mismatches=2;indels=0;unknowns=0;Target=comp145973_c0_seq1 172 282 .;locus=RLOC_00010748
Chr1	stalkie_big_nohaplotig	exon	122914274	122914459	99	+	.	Parent=comp145973_c0_seq1.mrna1;Target=comp145973_c0_seq1 99 284 -
Chr1	stalkie_big_nohaplotig	exon	122914541	122914634	98	+	.	Parent=comp145973_c0_seq1.mrna1;Target=comp145973_c0_seq1 5 98 -
Chr1	stalkie_big_nohaplotig	CDS	122914276	122914386	.	+	0	Parent=comp145973_c0_seq1.mrna1
Chr1	gffcl	locus	122934610	122947766	.	-	.	ID=RLOC_00010749;geneIDs=FBgn0085440.1.path1;transcripts=FBgn0085440.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122934610	122947766	.	-	.	ID=FBgn0085440.1.mrna1;geneID=FBgn0085440.1.path1;Name=FBgn0085440.1;Dir=sensecoverage=100.0;identity=99.4;matches=2332;mismatches=14;indels=0;unknowns=0;locus=RLOC_00010749
Chr1	stalkie_big_nohaplotig	exon	122934610	122934884	99	-	.	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 2072 2346 +
Chr1	stalkie_big_nohaplotig	exon	122934947	122935020	100	-	.	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 1998 2071 +
Chr1	stalkie_big_nohaplotig	exon	122935103	122935257	100	-	.	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 1843 1997 +
Chr1	stalkie_big_nohaplotig	exon	122935326	122935470	100	-	.	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 1698 1842 +
Chr1	stalkie_big_nohaplotig	exon	122935815	122935929	100	-	.	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 1583 1697 +
Chr1	stalkie_big_nohaplotig	exon	122935994	122936229	99	-	.	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 1347 1582 +
Chr1	stalkie_big_nohaplotig	exon	122937061	122937177	100	-	.	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 1230 1346 +
Chr1	stalkie_big_nohaplotig	exon	122937287	122937430	100	-	.	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 1086 1229 +
Chr1	stalkie_big_nohaplotig	exon	122939033	122939104	97	-	.	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 1014 1085 +
Chr1	stalkie_big_nohaplotig	exon	122939423	122939563	99	-	.	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 873 1013 +
Chr1	stalkie_big_nohaplotig	exon	122940798	122940869	95	-	.	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 801 872 +
Chr1	stalkie_big_nohaplotig	exon	122940997	122941068	98	-	.	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 729 800 +
Chr1	stalkie_big_nohaplotig	exon	122942421	122942492	98	-	.	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 657 728 +
Chr1	stalkie_big_nohaplotig	exon	122942589	122942666	100	-	.	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 579 656 +
Chr1	stalkie_big_nohaplotig	exon	122944704	122944775	100	-	.	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 507 578 +
Chr1	stalkie_big_nohaplotig	exon	122944866	122944977	100	-	.	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 395 506 +
Chr1	stalkie_big_nohaplotig	exon	122945171	122945497	99	-	.	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 68 394 +
Chr1	stalkie_big_nohaplotig	exon	122947700	122947766	100	-	.	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 1 67 +
Chr1	stalkie_big_nohaplotig	CDS	122934610	122934884	.	-	2	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 2072 2346 +
Chr1	stalkie_big_nohaplotig	CDS	122934947	122935020	.	-	1	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 1998 2071 +
Chr1	stalkie_big_nohaplotig	CDS	122935103	122935257	.	-	0	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 1843 1997 +
Chr1	stalkie_big_nohaplotig	CDS	122935326	122935470	.	-	1	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 1698 1842 +
Chr1	stalkie_big_nohaplotig	CDS	122935815	122935929	.	-	2	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 1583 1697 +
Chr1	stalkie_big_nohaplotig	CDS	122935994	122936229	.	-	1	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 1347 1582 +
Chr1	stalkie_big_nohaplotig	CDS	122937061	122937177	.	-	1	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 1230 1346 +
Chr1	stalkie_big_nohaplotig	CDS	122937287	122937430	.	-	1	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 1086 1229 +
Chr1	stalkie_big_nohaplotig	CDS	122939033	122939104	.	-	1	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 1014 1085 +
Chr1	stalkie_big_nohaplotig	CDS	122939423	122939563	.	-	1	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 873 1013 +
Chr1	stalkie_big_nohaplotig	CDS	122940798	122940869	.	-	1	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 801 872 +
Chr1	stalkie_big_nohaplotig	CDS	122940997	122941068	.	-	1	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 729 800 +
Chr1	stalkie_big_nohaplotig	CDS	122942421	122942492	.	-	1	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 657 728 +
Chr1	stalkie_big_nohaplotig	CDS	122942589	122942666	.	-	1	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 579 656 +
Chr1	stalkie_big_nohaplotig	CDS	122944704	122944775	.	-	1	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 507 578 +
Chr1	stalkie_big_nohaplotig	CDS	122944866	122944977	.	-	2	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 395 506 +
Chr1	stalkie_big_nohaplotig	CDS	122945171	122945497	.	-	2	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 68 394 +
Chr1	stalkie_big_nohaplotig	CDS	122947700	122947766	.	-	0	Parent=FBgn0085440.1.mrna1;Target=FBgn0085440.1 1 67 +
Chr1	gffcl	locus	122985014	122986009	.	-	.	ID=RLOC_00010750;geneIDs=ORF1835.path5;transcripts=ORF1835.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	122985014	122986009	.	-	.	ID=ORF1835.mrna5;geneID=ORF1835.path5;Name=ORF1835;Dir=indeterminatecoverage=100.0;identity=97.8;matches=974;mismatches=13;indels=9;unknowns=0;Target=ORF1835 987 1 .;CDS_Target=ORF1835 987 262 .;locus=RLOC_00010750
Chr1	stalkie_big_nohaplotig	exon	122985014	122986009	97	-	.	Parent=ORF1835.mrna5
Chr1	stalkie_big_nohaplotig	CDS	122985014	122985743	.	-	0	Parent=ORF1835.mrna5
Chr1	gffcl	locus	122989098	122989346	.	+	.	ID=RLOC_00010751;geneIDs=comp108061_c0_seq1.path1;transcripts=comp108061_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122989098	122989346	.	+	.	ID=comp108061_c0_seq1.mrna1;geneID=comp108061_c0_seq1.path1;Name=comp108061_c0_seq1;Dir=indeterminatecoverage=99.2;identity=91.3;matches=241;mismatches=7;indels=16;unknowns=0;Target=comp108061_c0_seq1 265 3 .;CDS_Target=comp108061_c0_seq1 81 22 .;locus=RLOC_00010751
Chr1	stalkie_big_nohaplotig	exon	122989098	122989346	91	+	.	Parent=comp108061_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122989117	122989177	.	+	0	Parent=comp108061_c0_seq1.mrna1
Chr1	gffcl	locus	122991013	122992200	.	-	.	ID=RLOC_00010752;geneIDs=FBgn0040397.4.path1;transcripts=FBgn0040397.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	122991013	122992200	.	-	.	ID=FBgn0040397.4.mrna1;geneID=FBgn0040397.4.path1;Name=FBgn0040397.4;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1184;mismatches=4;indels=0;unknowns=0;Target=FBgn0040397.4 1188 1 .;locus=RLOC_00010752
Chr1	stalkie_big_nohaplotig	exon	122991013	122992200	99	-	.	Parent=FBgn0040397.4.mrna1
Chr1	stalkie_big_nohaplotig	CDS	122991013	122992200	.	-	0	Parent=FBgn0040397.4.mrna1
Chr1	gffcl	locus	123042946	123043195	.	+	.	ID=RLOC_00010753;geneIDs=comp1922384_c0_seq1.path1;transcripts=comp1922384_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123042946	123043195	.	+	.	ID=comp1922384_c0_seq1.mrna1;geneID=comp1922384_c0_seq1.path1;Name=comp1922384_c0_seq1;Dir=indeterminatecoverage=99.6;identity=97.2;matches=243;mismatches=7;indels=0;unknowns=0;Target=comp1922384_c0_seq1 250 1 .;CDS_Target=comp1922384_c0_seq1 98 3 .;locus=RLOC_00010753
Chr1	stalkie_big_nohaplotig	exon	123042946	123043195	97	+	.	Parent=comp1922384_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	123042948	123043043	.	+	0	Parent=comp1922384_c0_seq1.mrna1
Chr1	gffcl	locus	123070128	123073993	.	+	.	ID=RLOC_00010754;geneIDs=FBgn0016034.5.path1;transcripts=FBgn0016034.5.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123070128	123073993	.	+	.	ID=FBgn0016034.5.mrna1;geneID=FBgn0016034.5.path1;Name=FBgn0016034.5;Dir=sensecoverage=100.0;identity=98.6;matches=1388;mismatches=15;indels=4;unknowns=0;locus=RLOC_00010754
Chr1	stalkie_big_nohaplotig	exon	123070128	123070230	100	+	.	Parent=FBgn0016034.5.mrna1;Target=FBgn0016034.5 1 103 +
Chr1	stalkie_big_nohaplotig	exon	123070316	123070465	99	+	.	Parent=FBgn0016034.5.mrna1;Target=FBgn0016034.5 104 253 +
Chr1	stalkie_big_nohaplotig	exon	123071292	123071671	100	+	.	Parent=FBgn0016034.5.mrna1;Target=FBgn0016034.5 254 633 +
Chr1	stalkie_big_nohaplotig	exon	123073212	123073671	98	+	.	Parent=FBgn0016034.5.mrna1;Target=FBgn0016034.5 634 1093 +
Chr1	stalkie_big_nohaplotig	exon	123073684	123073993	95	+	.	Parent=FBgn0016034.5.mrna1;Target=FBgn0016034.5 1094 1407 +
Chr1	stalkie_big_nohaplotig	CDS	123070128	123070230	.	+	0	Parent=FBgn0016034.5.mrna1;Target=FBgn0016034.5 1 103 +
Chr1	stalkie_big_nohaplotig	CDS	123070316	123070465	.	+	2	Parent=FBgn0016034.5.mrna1;Target=FBgn0016034.5 104 253 +
Chr1	stalkie_big_nohaplotig	CDS	123071292	123071671	.	+	2	Parent=FBgn0016034.5.mrna1;Target=FBgn0016034.5 254 633 +
Chr1	stalkie_big_nohaplotig	CDS	123073212	123073671	.	+	0	Parent=FBgn0016034.5.mrna1;Target=FBgn0016034.5 634 1093 +
Chr1	stalkie_big_nohaplotig	CDS	123073684	123073993	.	+	2	Parent=FBgn0016034.5.mrna1;Target=FBgn0016034.5 1094 1407 +
Chr1	gffcl	locus	123155010	123155724	.	+	.	ID=RLOC_00010755;geneIDs=comp160402_c0_seq1.path1;transcripts=comp160402_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123155010	123155724	.	+	.	ID=comp160402_c0_seq1.mrna1;geneID=comp160402_c0_seq1.path1;Name=comp160402_c0_seq1;Dir=sensecoverage=99.7;identity=96.6;matches=633;mismatches=12;indels=10;unknowns=0;locus=RLOC_00010755
Chr1	stalkie_big_nohaplotig	exon	123155010	123155265	93	+	.	Parent=comp160402_c0_seq1.mrna1;Target=comp160402_c0_seq1 1 246 +
Chr1	stalkie_big_nohaplotig	exon	123155326	123155724	98	+	.	Parent=comp160402_c0_seq1.mrna1;Target=comp160402_c0_seq1 247 645 +
Chr1	stalkie_big_nohaplotig	CDS	123155251	123155265	.	+	0	Parent=comp160402_c0_seq1.mrna1;Target=comp160402_c0_seq1 232 246 +
Chr1	stalkie_big_nohaplotig	CDS	123155326	123155715	.	+	0	Parent=comp160402_c0_seq1.mrna1;Target=comp160402_c0_seq1 247 636 +
Chr1	gffcl	locus	123256237	123256763	.	-	.	ID=RLOC_00010756;geneIDs=FBgn0017557.1.path1;transcripts=FBgn0017557.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123256237	123256763	.	-	.	ID=FBgn0017557.1.mrna1;geneID=FBgn0017557.1.path1;Name=FBgn0017557.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=525;mismatches=2;indels=1;unknowns=0;Target=FBgn0017557.1 528 1 .;locus=RLOC_00010756
Chr1	stalkie_big_nohaplotig	exon	123256237	123256763	99	-	.	Parent=FBgn0017557.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	123256237	123256763	.	-	0	Parent=FBgn0017557.1.mrna1
Chr1	gffcl	locus	123258294	123258773	.	+	.	ID=RLOC_00010757;geneIDs=comp146213_c0_seq1.path1;transcripts=comp146213_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123258294	123258773	.	+	.	ID=comp146213_c0_seq1.mrna1;geneID=comp146213_c0_seq1.path1;Name=comp146213_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.1;matches=471;mismatches=9;indels=0;unknowns=0;Target=comp146213_c0_seq1 481 2 .;CDS_Target=comp146213_c0_seq1 335 3 .;locus=RLOC_00010757
Chr1	stalkie_big_nohaplotig	exon	123258294	123258773	98	+	.	Parent=comp146213_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	123258295	123258627	.	+	0	Parent=comp146213_c0_seq1.mrna1
Chr1	gffcl	locus	123278838	123279548	.	+	.	ID=RLOC_00010758;geneIDs=comp151767_c0_seq1.path1;transcripts=comp151767_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123278838	123279548	.	+	.	ID=comp151767_c0_seq1.mrna1;geneID=comp151767_c0_seq1.path1;Name=comp151767_c0_seq1;Dir=indeterminatecoverage=99.9;identity=90.7;matches=684;mismatches=26;indels=44;unknowns=0;Target=comp151767_c0_seq1 754 2 .;CDS_Target=comp151767_c0_seq1 157 32 .;locus=RLOC_00010758
Chr1	stalkie_big_nohaplotig	exon	123278838	123279548	90	+	.	Parent=comp151767_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	123278868	123278993	.	+	0	Parent=comp151767_c0_seq1.mrna1
Chr1	gffcl	locus	123279720	123280734	.	-	.	ID=RLOC_00010759;geneIDs=comp156427_c0_seq1.path1;transcripts=comp156427_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123279720	123280734	.	-	.	ID=comp156427_c0_seq1.mrna1;geneID=comp156427_c0_seq1.path1;Name=comp156427_c0_seq1;Dir=antisensecoverage=99.6;identity=96.6;matches=802;mismatches=20;indels=8;unknowns=0;Target=comp156427_c0_seq1 183 602 .;locus=RLOC_00010759
Chr1	stalkie_big_nohaplotig	exon	123279720	123280332	97	-	.	Parent=comp156427_c0_seq1.mrna1;Target=comp156427_c0_seq1 3 607 -
Chr1	stalkie_big_nohaplotig	exon	123280518	123280734	93	-	.	Parent=comp156427_c0_seq1.mrna1;Target=comp156427_c0_seq1 608 824 -
Chr1	stalkie_big_nohaplotig	CDS	123279908	123280327	.	-	0	Parent=comp156427_c0_seq1.mrna1
Chr1	gffcl	locus	123305962	123308046	.	-	.	ID=RLOC_00010761;geneIDs=comp155248_c0_seq1.path1;transcripts=comp155248_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123305962	123308046	.	-	.	ID=comp155248_c0_seq1.mrna1;geneID=comp155248_c0_seq1.path1;Name=comp155248_c0_seq1;Dir=antisensecoverage=100.0;identity=94.5;matches=684;mismatches=14;indels=26;unknowns=0;locus=RLOC_00010761
Chr1	stalkie_big_nohaplotig	exon	123305962	123306039	98	-	.	Parent=comp155248_c0_seq1.mrna1;Target=comp155248_c0_seq1 1 78 -
Chr1	stalkie_big_nohaplotig	exon	123306915	123307076	100	-	.	Parent=comp155248_c0_seq1.mrna1;Target=comp155248_c0_seq1 79 240 -
Chr1	stalkie_big_nohaplotig	exon	123307582	123308046	91	-	.	Parent=comp155248_c0_seq1.mrna1;Target=comp155248_c0_seq1 241 717 -
Chr1	stalkie_big_nohaplotig	CDS	123305962	123306039	.	-	0	Parent=comp155248_c0_seq1.mrna1;Target=comp155248_c0_seq1 1 78 .
Chr1	stalkie_big_nohaplotig	CDS	123306915	123307058	.	-	0	Parent=comp155248_c0_seq1.mrna1;Target=comp155248_c0_seq1 79 222 .
Chr1	gffcl	locus	123317505	123319125	.	-	.	ID=RLOC_00010762;geneIDs=FBgn0040397.2.path1;transcripts=FBgn0040397.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123317505	123319125	.	-	.	ID=FBgn0040397.2.mrna1;geneID=FBgn0040397.2.path1;Name=FBgn0040397.2;Dir=sensecoverage=99.9;identity=99.7;matches=1548;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010762
Chr1	stalkie_big_nohaplotig	exon	123317505	123318862	99	-	.	Parent=FBgn0040397.2.mrna1;Target=FBgn0040397.2 197 1554 +
Chr1	stalkie_big_nohaplotig	exon	123318932	123319125	99	-	.	Parent=FBgn0040397.2.mrna1;Target=FBgn0040397.2 3 196 +
Chr1	stalkie_big_nohaplotig	CDS	123317505	123318862	.	-	2	Parent=FBgn0040397.2.mrna1;Target=FBgn0040397.2 197 1554 +
Chr1	stalkie_big_nohaplotig	CDS	123318932	123319124	.	-	0	Parent=FBgn0040397.2.mrna1;Target=FBgn0040397.2 4 196 +
Chr1	gffcl	locus	123392864	123393515	.	-	.	ID=RLOC_00010763;geneIDs=comp149889_c0_seq1.path1;transcripts=comp149889_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123392864	123393515	.	-	.	ID=comp149889_c0_seq1.mrna1;geneID=comp149889_c0_seq1.path1;Name=comp149889_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.9;matches=650;mismatches=2;indels=33;unknowns=0;Target=comp149889_c0_seq1 685 1 .;CDS_Target=comp149889_c0_seq1 266 138 .;locus=RLOC_00010763
Chr1	stalkie_big_nohaplotig	exon	123392864	123393515	94	-	.	Parent=comp149889_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	123393250	123393378	.	-	0	Parent=comp149889_c0_seq1.mrna1
Chr1	gffcl	locus	123393574	123393794	.	+	.	ID=RLOC_00010764;geneIDs=comp152272_c0_seq1.path1;transcripts=comp152272_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123393574	123393794	.	+	.	ID=comp152272_c0_seq1.mrna1;geneID=comp152272_c0_seq1.path1;Name=comp152272_c0_seq1;Dir=indeterminatecoverage=54.3;identity=98.6;matches=218;mismatches=3;indels=0;unknowns=0;Target=comp152272_c0_seq1 221 1 .;CDS_Target=comp152272_c0_seq1 61 2 .;locus=RLOC_00010764
Chr1	stalkie_big_nohaplotig	exon	123393574	123393794	98	+	.	Parent=comp152272_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	123393575	123393634	.	+	0	Parent=comp152272_c0_seq1.mrna1
Chr1	gffcl	locus	123395181	123395599	.	+	.	ID=RLOC_00010765;geneIDs=comp118896_c1_seq1.path1;transcripts=comp118896_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123395181	123395599	.	+	.	ID=comp118896_c1_seq1.mrna1;geneID=comp118896_c1_seq1.path1;Name=comp118896_c1_seq1;Dir=indeterminatecoverage=98.1;identity=99.8;matches=418;mismatches=1;indels=0;unknowns=0;Target=comp118896_c1_seq1 427 9 .;CDS_Target=comp118896_c1_seq1 326 192 .;locus=RLOC_00010765
Chr1	stalkie_big_nohaplotig	exon	123395181	123395599	99	+	.	Parent=comp118896_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	123395364	123395498	.	+	0	Parent=comp118896_c1_seq1.mrna1
Chr1	gffcl	locus	123418545	123430622	.	+	.	ID=RLOC_00010766;geneIDs=comp146602_c0_seq1.path1;transcripts=comp146602_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123418545	123430622	.	+	.	ID=comp146602_c0_seq1.mrna1;geneID=comp146602_c0_seq1.path1;Name=comp146602_c0_seq1;Dir=indeterminatecoverage=89.2;identity=100.0;matches=529;mismatches=0;indels=0;unknowns=0;Target=comp146602_c0_seq1 502 416 .;locus=RLOC_00010766
Chr1	stalkie_big_nohaplotig	exon	123418545	123418548	100	+	.	Parent=comp146602_c0_seq1.mrna1;Target=comp146602_c0_seq1 68 65 .
Chr1	stalkie_big_nohaplotig	exon	123424175	123424177	100	+	.	Parent=comp146602_c0_seq1.mrna1;Target=comp146602_c0_seq1 71 69 .
Chr1	stalkie_big_nohaplotig	exon	123430101	123430622	100	+	.	Parent=comp146602_c0_seq1.mrna1;Target=comp146602_c0_seq1 593 72 .
Chr1	stalkie_big_nohaplotig	CDS	123430445	123430531	.	+	0	Parent=comp146602_c0_seq1.mrna1
Chr1	gffcl	locus	123432069	123433552	.	+	.	ID=RLOC_00010767;geneIDs=comp162662_c0_seq1.path1;transcripts=comp162662_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123432069	123433552	.	+	.	ID=comp162662_c0_seq1.mrna1;geneID=comp162662_c0_seq1.path1;Name=comp162662_c0_seq1;Dir=indeterminatecoverage=99.1;identity=95.8;matches=1442;mismatches=36;indels=28;unknowns=0;Target=comp162662_c0_seq1 1513 14 .;CDS_Target=comp162662_c0_seq1 1074 922 .;locus=RLOC_00010767
Chr1	stalkie_big_nohaplotig	exon	123432069	123433552	95	+	.	Parent=comp162662_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	123432977	123433111	.	+	0	Parent=comp162662_c0_seq1.mrna1
Chr1	gffcl	locus	123437835	123438346	.	-	.	ID=RLOC_00010768;geneIDs=comp148214_c0_seq1.path1;transcripts=comp148214_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123437835	123438346	.	-	.	ID=comp148214_c0_seq1.mrna1;geneID=comp148214_c0_seq1.path1;Name=comp148214_c0_seq1;Dir=indeterminatecoverage=90.0;identity=99.8;matches=511;mismatches=1;indels=0;unknowns=0;Target=comp148214_c0_seq1 556 45 .;CDS_Target=comp148214_c0_seq1 128 66 .;locus=RLOC_00010768
Chr1	stalkie_big_nohaplotig	exon	123437835	123438346	99	-	.	Parent=comp148214_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	123438263	123438325	.	-	0	Parent=comp148214_c0_seq1.mrna1
Chr1	gffcl	locus	123439776	123447945	.	-	.	ID=RLOC_00010769;geneIDs=FBgn0035533.1.path1;transcripts=FBgn0035533.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123439776	123447945	.	-	.	ID=FBgn0035533.1.mrna1;geneID=FBgn0035533.1.path1;Name=FBgn0035533.1;Dir=sensecoverage=99.9;identity=99.7;matches=1279;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010769
Chr1	stalkie_big_nohaplotig	exon	123439776	123439936	100	-	.	Parent=FBgn0035533.1.mrna1;Target=FBgn0035533.1 1124 1284 +
Chr1	stalkie_big_nohaplotig	exon	123440014	123440180	99	-	.	Parent=FBgn0035533.1.mrna1;Target=FBgn0035533.1 957 1123 +
Chr1	stalkie_big_nohaplotig	exon	123442115	123442249	100	-	.	Parent=FBgn0035533.1.mrna1;Target=FBgn0035533.1 822 956 +
Chr1	stalkie_big_nohaplotig	exon	123442324	123442673	100	-	.	Parent=FBgn0035533.1.mrna1;Target=FBgn0035533.1 472 821 +
Chr1	stalkie_big_nohaplotig	exon	123447333	123447519	100	-	.	Parent=FBgn0035533.1.mrna1;Target=FBgn0035533.1 285 471 +
Chr1	stalkie_big_nohaplotig	exon	123447591	123447769	98	-	.	Parent=FBgn0035533.1.mrna1;Target=FBgn0035533.1 106 284 +
Chr1	stalkie_big_nohaplotig	exon	123447842	123447945	99	-	.	Parent=FBgn0035533.1.mrna1;Target=FBgn0035533.1 2 105 +
Chr1	stalkie_big_nohaplotig	CDS	123439776	123439936	.	-	2	Parent=FBgn0035533.1.mrna1;Target=FBgn0035533.1 1124 1284 +
Chr1	stalkie_big_nohaplotig	CDS	123440014	123440180	.	-	1	Parent=FBgn0035533.1.mrna1;Target=FBgn0035533.1 957 1123 +
Chr1	stalkie_big_nohaplotig	CDS	123442115	123442249	.	-	1	Parent=FBgn0035533.1.mrna1;Target=FBgn0035533.1 822 956 +
Chr1	stalkie_big_nohaplotig	CDS	123442324	123442673	.	-	0	Parent=FBgn0035533.1.mrna1;Target=FBgn0035533.1 472 821 +
Chr1	stalkie_big_nohaplotig	CDS	123447333	123447519	.	-	1	Parent=FBgn0035533.1.mrna1;Target=FBgn0035533.1 285 471 +
Chr1	stalkie_big_nohaplotig	CDS	123447591	123447769	.	-	0	Parent=FBgn0035533.1.mrna1;Target=FBgn0035533.1 106 284 +
Chr1	stalkie_big_nohaplotig	CDS	123447842	123447943	.	-	0	Parent=FBgn0035533.1.mrna1;Target=FBgn0035533.1 4 105 +
Chr1	gffcl	locus	123441282	123441917	.	+	.	ID=RLOC_00010770;geneIDs=comp157129_c1_seq1.path1;transcripts=comp157129_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123441282	123441917	.	+	.	ID=comp157129_c1_seq1.mrna1;geneID=comp157129_c1_seq1.path1;Name=comp157129_c1_seq1;Dir=indeterminatecoverage=98.5;identity=99.5;matches=633;mismatches=3;indels=0;unknowns=0;Target=comp157129_c1_seq1 636 1 .;CDS_Target=comp157129_c1_seq1 135 1 .;locus=RLOC_00010770
Chr1	stalkie_big_nohaplotig	exon	123441282	123441917	99	+	.	Parent=comp157129_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	123441282	123441416	.	+	0	Parent=comp157129_c1_seq1.mrna1
Chr1	gffcl	locus	123491127	123492705	.	-	.	ID=RLOC_00010771;geneIDs=FBgn0040397.1.path1;transcripts=FBgn0040397.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123491127	123492705	.	-	.	ID=FBgn0040397.1.mrna1;geneID=FBgn0040397.1.path1;Name=FBgn0040397.1;Dir=sensecoverage=100.0;identity=99.6;matches=1509;mismatches=6;indels=0;unknowns=0;locus=RLOC_00010771
Chr1	stalkie_big_nohaplotig	exon	123491127	123492478	99	-	.	Parent=FBgn0040397.1.mrna1;Target=FBgn0040397.1 164 1515 +
Chr1	stalkie_big_nohaplotig	exon	123492543	123492705	99	-	.	Parent=FBgn0040397.1.mrna1;Target=FBgn0040397.1 1 163 +
Chr1	stalkie_big_nohaplotig	CDS	123491127	123492478	.	-	2	Parent=FBgn0040397.1.mrna1;Target=FBgn0040397.1 164 1515 +
Chr1	stalkie_big_nohaplotig	CDS	123492543	123492705	.	-	0	Parent=FBgn0040397.1.mrna1;Target=FBgn0040397.1 1 163 +
Chr1	gffcl	locus	123541669	123559771	.	+	.	ID=RLOC_00010772;geneIDs=comp149271_c0_seq1.path1;transcripts=comp149271_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123541669	123559771	.	+	.	ID=comp149271_c0_seq1.mrna1;geneID=comp149271_c0_seq1.path1;Name=comp149271_c0_seq1;Dir=sensecoverage=99.2;identity=98.7;matches=388;mismatches=5;indels=0;unknowns=0;Target=comp149271_c0_seq1 229 369 +;locus=RLOC_00010772
Chr1	stalkie_big_nohaplotig	exon	123541669	123541774	98	+	.	Parent=comp149271_c0_seq1.mrna1;Target=comp149271_c0_seq1 1 106 +
Chr1	stalkie_big_nohaplotig	exon	123559485	123559771	98	+	.	Parent=comp149271_c0_seq1.mrna1;Target=comp149271_c0_seq1 107 393 +
Chr1	stalkie_big_nohaplotig	CDS	123559607	123559747	.	+	0	Parent=comp149271_c0_seq1.mrna1
Chr1	gffcl	locus	123582839	123583643	.	-	.	ID=RLOC_00010773;geneIDs=comp163405_c2_seq1.path1;transcripts=comp163405_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123582839	123583643	.	-	.	ID=comp163405_c2_seq1.mrna1;geneID=comp163405_c2_seq1.path1;Name=comp163405_c2_seq1;Dir=indeterminatecoverage=98.9;identity=99.3;matches=800;mismatches=3;indels=3;unknowns=0;Target=comp163405_c2_seq1 813 10 .;CDS_Target=comp163405_c2_seq1 85 11 .;locus=RLOC_00010773
Chr1	stalkie_big_nohaplotig	exon	123582839	123583643	99	-	.	Parent=comp163405_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	123583569	123583642	.	-	0	Parent=comp163405_c2_seq1.mrna1
Chr1	gffcl	locus	123634956	123636505	.	-	.	ID=RLOC_00010774;geneIDs=FBgn0040363.1.path1;transcripts=FBgn0040363.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123634956	123636505	.	-	.	ID=FBgn0040363.1.mrna1;geneID=FBgn0040363.1.path1;Name=FBgn0040363.1;Dir=sensecoverage=100.0;identity=97.7;matches=1459;mismatches=35;indels=0;unknowns=0;locus=RLOC_00010774
Chr1	stalkie_big_nohaplotig	exon	123634956	123636304	97	-	.	Parent=FBgn0040363.1.mrna1;Target=FBgn0040363.1 146 1494 +
Chr1	stalkie_big_nohaplotig	exon	123636361	123636505	99	-	.	Parent=FBgn0040363.1.mrna1;Target=FBgn0040363.1 1 145 +
Chr1	stalkie_big_nohaplotig	CDS	123634956	123636304	.	-	2	Parent=FBgn0040363.1.mrna1;Target=FBgn0040363.1 146 1494 +
Chr1	stalkie_big_nohaplotig	CDS	123636361	123636505	.	-	0	Parent=FBgn0040363.1.mrna1;Target=FBgn0040363.1 1 145 +
Chr1	gffcl	locus	123645352	123648969	.	+	.	ID=RLOC_00010775;geneIDs=FBgn0040364.1.path1;transcripts=FBgn0040364.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123645352	123648969	.	+	.	ID=FBgn0040364.1.mrna1;geneID=FBgn0040364.1.path1;Name=FBgn0040364.1;Dir=sensecoverage=99.8;identity=99.5;matches=923;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010775
Chr1	stalkie_big_nohaplotig	exon	123645352	123645509	99	+	.	Parent=FBgn0040364.1.mrna1;Target=FBgn0040364.1 3 160 +
Chr1	stalkie_big_nohaplotig	exon	123648200	123648969	99	+	.	Parent=FBgn0040364.1.mrna1;Target=FBgn0040364.1 161 930 +
Chr1	stalkie_big_nohaplotig	CDS	123645353	123645509	.	+	0	Parent=FBgn0040364.1.mrna1;Target=FBgn0040364.1 4 160 +
Chr1	stalkie_big_nohaplotig	CDS	123648200	123648969	.	+	2	Parent=FBgn0040364.1.mrna1;Target=FBgn0040364.1 161 930 +
Chr1	gffcl	locus	123672179	123673210	.	-	.	ID=RLOC_00010776;geneIDs=FBgn0004888.1.path1;transcripts=FBgn0004888.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123672179	123673210	.	-	.	ID=FBgn0004888.1.mrna1;geneID=FBgn0004888.1.path1;Name=FBgn0004888.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1028;mismatches=4;indels=0;unknowns=0;Target=FBgn0004888.1 1032 1 .;locus=RLOC_00010776
Chr1	stalkie_big_nohaplotig	exon	123672179	123673210	99	-	.	Parent=FBgn0004888.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	123672179	123673210	.	-	0	Parent=FBgn0004888.1.mrna1
Chr1	gffcl	locus	123673394	123684576	.	+	.	ID=RLOC_00010777;geneIDs=comp159389_c4_seq1.path4;transcripts=comp159389_c4_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	123673394	123684576	.	+	.	ID=comp159389_c4_seq1.mrna4;geneID=comp159389_c4_seq1.path4;Name=comp159389_c4_seq1;Dir=antisensecoverage=30.5;identity=92.4;matches=568;mismatches=43;indels=4;unknowns=0;locus=RLOC_00010777
Chr1	stalkie_big_nohaplotig	exon	123673394	123673676	97	+	.	Parent=comp159389_c4_seq1.mrna4;Target=comp159389_c4_seq1 1710 1992 -
Chr1	stalkie_big_nohaplotig	exon	123684247	123684576	88	+	.	Parent=comp159389_c4_seq1.mrna4;Target=comp159389_c4_seq1 1380 1709 -
Chr1	stalkie_big_nohaplotig	CDS	123673618	123673676	.	+	0	Parent=comp159389_c4_seq1.mrna4;Target=comp159389_c4_seq1 1710 1768 .
Chr1	stalkie_big_nohaplotig	CDS	123684247	123684574	.	+	1	Parent=comp159389_c4_seq1.mrna4;Target=comp159389_c4_seq1 1382 1709 .
Chr1	gffcl	locus	123673765	123674255	.	-	.	ID=RLOC_00010778;geneIDs=comp151981_c0_seq1.path1;transcripts=comp151981_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123673765	123674255	.	-	.	ID=comp151981_c0_seq1.mrna1;geneID=comp151981_c0_seq1.path1;Name=comp151981_c0_seq1;Dir=sensecoverage=91.5;identity=99.2;matches=374;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010778
Chr1	stalkie_big_nohaplotig	exon	123673765	123674096	99	-	.	Parent=comp151981_c0_seq1.mrna1;Target=comp151981_c0_seq1 68 399 +
Chr1	stalkie_big_nohaplotig	exon	123674211	123674255	95	-	.	Parent=comp151981_c0_seq1.mrna1;Target=comp151981_c0_seq1 23 67 +
Chr1	stalkie_big_nohaplotig	CDS	123673903	123674096	.	-	2	Parent=comp151981_c0_seq1.mrna1;Target=comp151981_c0_seq1 68 261 +
Chr1	stalkie_big_nohaplotig	CDS	123674211	123674253	.	-	0	Parent=comp151981_c0_seq1.mrna1;Target=comp151981_c0_seq1 25 67 +
Chr1	gffcl	locus	123689459	123692775	.	-	.	ID=RLOC_00010779;geneIDs=FBgn0040398.1.path1;transcripts=FBgn0040398.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123689459	123692775	.	-	.	ID=FBgn0040398.1.mrna1;geneID=FBgn0040398.1.path1;Name=FBgn0040398.1;Dir=sensecoverage=100.0;identity=99.6;matches=1031;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010779
Chr1	stalkie_big_nohaplotig	exon	123689459	123690361	99	-	.	Parent=FBgn0040398.1.mrna1;Target=FBgn0040398.1 133 1035 +
Chr1	stalkie_big_nohaplotig	exon	123692644	123692775	100	-	.	Parent=FBgn0040398.1.mrna1;Target=FBgn0040398.1 1 132 +
Chr1	stalkie_big_nohaplotig	CDS	123689459	123690361	.	-	0	Parent=FBgn0040398.1.mrna1;Target=FBgn0040398.1 133 1035 +
Chr1	stalkie_big_nohaplotig	CDS	123692644	123692775	.	-	0	Parent=FBgn0040398.1.mrna1;Target=FBgn0040398.1 1 132 +
Chr1	gffcl	locus	123697120	123697676	.	+	.	ID=RLOC_00010780;geneIDs=comp159751_c0_seq1.path1;transcripts=comp159751_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123697120	123697676	.	+	.	ID=comp159751_c0_seq1.mrna1;geneID=comp159751_c0_seq1.path1;Name=comp159751_c0_seq1;Dir=indeterminatecoverage=95.9;identity=87.7;matches=519;mismatches=34;indels=39;unknowns=0;Target=comp159751_c0_seq1 592 5 .;CDS_Target=comp159751_c0_seq1 433 401 .;locus=RLOC_00010780
Chr1	stalkie_big_nohaplotig	exon	123697120	123697676	87	+	.	Parent=comp159751_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	123697485	123697517	.	+	0	Parent=comp159751_c0_seq1.mrna1
Chr1	gffcl	locus	123697721	123698086	.	-	.	ID=RLOC_00010781;geneIDs=comp149895_c0_seq1.path1;transcripts=comp149895_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123697721	123698086	.	-	.	ID=comp149895_c0_seq1.mrna1;geneID=comp149895_c0_seq1.path1;Name=comp149895_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=354;mismatches=5;indels=7;unknowns=0;Target=comp149895_c0_seq1 359 1 .;CDS_Target=comp149895_c0_seq1 244 119 .;locus=RLOC_00010781
Chr1	stalkie_big_nohaplotig	exon	123697721	123698086	96	-	.	Parent=comp149895_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	123697836	123697961	.	-	0	Parent=comp149895_c0_seq1.mrna1
Chr1	gffcl	locus	123698095	123700320	.	-	.	ID=RLOC_00010782;geneIDs=comp156160_c0_seq1.path1;transcripts=comp156160_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123698095	123700320	.	-	.	ID=comp156160_c0_seq1.mrna1;geneID=comp156160_c0_seq1.path1;Name=comp156160_c0_seq1;Dir=sensecoverage=96.4;identity=99.0;matches=580;mismatches=6;indels=0;unknowns=0;locus=RLOC_00010782
Chr1	stalkie_big_nohaplotig	exon	123698095	123698500	99	-	.	Parent=comp156160_c0_seq1.mrna1;Target=comp156160_c0_seq1 203 608 +
Chr1	stalkie_big_nohaplotig	exon	123700141	123700320	97	-	.	Parent=comp156160_c0_seq1.mrna1;Target=comp156160_c0_seq1 23 202 +
Chr1	stalkie_big_nohaplotig	CDS	123698307	123698500	.	-	2	Parent=comp156160_c0_seq1.mrna1;Target=comp156160_c0_seq1 203 396 +
Chr1	stalkie_big_nohaplotig	CDS	123700141	123700225	.	-	0	Parent=comp156160_c0_seq1.mrna1;Target=comp156160_c0_seq1 118 202 +
Chr1	gffcl	locus	123698960	123699445	.	+	.	ID=RLOC_00010783;geneIDs=comp156392_c0_seq1.path1;transcripts=comp156392_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123698960	123699445	.	+	.	ID=comp156392_c0_seq1.mrna1;geneID=comp156392_c0_seq1.path1;Name=comp156392_c0_seq1;Dir=indeterminatecoverage=99.8;identity=95.9;matches=466;mismatches=13;indels=7;unknowns=0;Target=comp156392_c0_seq1 480 2 .;CDS_Target=comp156392_c0_seq1 145 50 .;locus=RLOC_00010783
Chr1	stalkie_big_nohaplotig	exon	123698960	123699445	95	+	.	Parent=comp156392_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	123699008	123699104	.	+	0	Parent=comp156392_c0_seq1.mrna1
Chr1	gffcl	locus	123702375	123703485	.	+	.	ID=RLOC_00010784;geneIDs=comp154522_c0_seq1.path1;transcripts=comp154522_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123702375	123703485	.	+	.	ID=comp154522_c0_seq1.mrna1;geneID=comp154522_c0_seq1.path1;Name=comp154522_c0_seq1;Dir=indeterminatecoverage=98.6;identity=95.3;matches=1083;mismatches=28;indels=25;unknowns=0;Target=comp154522_c0_seq1 1152 17 .;CDS_Target=comp154522_c0_seq1 747 523 .;locus=RLOC_00010784
Chr1	stalkie_big_nohaplotig	exon	123702375	123703485	95	+	.	Parent=comp154522_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	123702881	123703105	.	+	0	Parent=comp154522_c0_seq1.mrna1
Chr1	gffcl	locus	123703505	123704087	.	-	.	ID=RLOC_00010785;geneIDs=comp154557_c0_seq1.path1;transcripts=comp154557_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123703505	123704087	.	-	.	ID=comp154557_c0_seq1.mrna1;geneID=comp154557_c0_seq1.path1;Name=comp154557_c0_seq1;Dir=antisensecoverage=91.8;identity=98.4;matches=483;mismatches=5;indels=3;unknowns=0;locus=RLOC_00010785
Chr1	stalkie_big_nohaplotig	exon	123703505	123703843	98	-	.	Parent=comp154557_c0_seq1.mrna1;Target=comp154557_c0_seq1 19 358 -
Chr1	stalkie_big_nohaplotig	exon	123703938	123704087	98	-	.	Parent=comp154557_c0_seq1.mrna1;Target=comp154557_c0_seq1 359 508 -
Chr1	stalkie_big_nohaplotig	CDS	123703659	123703843	.	-	2	Parent=comp154557_c0_seq1.mrna1;Target=comp154557_c0_seq1 174 358 .
Chr1	stalkie_big_nohaplotig	CDS	123703938	123704022	.	-	0	Parent=comp154557_c0_seq1.mrna1;Target=comp154557_c0_seq1 359 443 .
Chr1	gffcl	locus	123706494	124367250	.	+	.	ID=RLOC_00010786;geneIDs=FBgn0003371.1.path1,FBgn0261922.1.path1,comp153075_c0_seq1.path1,comp153075_c0_seq1.path2,comp162718_c3_seq1.path1;transcripts=comp162718_c3_seq1.mrna1,FBgn0003371.1.mrna1,FBgn0261922.1.mrna1,comp153075_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123706494	124367250	.	+	.	ID=comp162718_c3_seq1.mrna1;geneID=comp162718_c3_seq1.path1;Name=comp162718_c3_seq1;Dir=antisensecoverage=72.0;identity=98.5;matches=2720;mismatches=19;indels=22;unknowns=0;locus=RLOC_00010786
Chr1	stalkie_big_nohaplotig	exon	123706494	123706496	100	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 2849 2851 -
Chr1	stalkie_big_nohaplotig	exon	123707352	123707360	100	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 2840 2848 -
Chr1	stalkie_big_nohaplotig	exon	123715047	123715066	45	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 2809 2839 -
Chr1	stalkie_big_nohaplotig	exon	123718098	123718108	90	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 2798 2808 -
Chr1	stalkie_big_nohaplotig	exon	123719034	123719052	84	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 2779 2797 -
Chr1	stalkie_big_nohaplotig	exon	123724881	123724890	100	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 2769 2778 -
Chr1	stalkie_big_nohaplotig	exon	123728869	123728870	100	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 2767 2768 -
Chr1	stalkie_big_nohaplotig	exon	123732029	123732043	73	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 2753 2766 -
Chr1	stalkie_big_nohaplotig	exon	123735839	123735847	100	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 2744 2752 -
Chr1	stalkie_big_nohaplotig	exon	123736117	123736124	100	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 2736 2743 -
Chr1	stalkie_big_nohaplotig	exon	123743337	123743346	90	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 2726 2735 -
Chr1	stalkie_big_nohaplotig	exon	123746798	123746807	70	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 2716 2725 -
Chr1	stalkie_big_nohaplotig	exon	123752878	123752883	100	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 2710 2715 -
Chr1	stalkie_big_nohaplotig	exon	123794690	123794692	100	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 2707 2709 -
Chr1	stalkie_big_nohaplotig	exon	123794703	123794709	100	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 2658 2664 -
Chr1	stalkie_big_nohaplotig	exon	123794913	123794915	100	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 2655 2657 -
Chr1	stalkie_big_nohaplotig	exon	123794941	123794943	100	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 2605 2607 -
Chr1	stalkie_big_nohaplotig	exon	124309974	124309980	100	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 2598 2604 -
Chr1	stalkie_big_nohaplotig	exon	124316840	124316846	100	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 2591 2597 -
Chr1	stalkie_big_nohaplotig	exon	124328095	124328114	90	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 2572 2590 -
Chr1	stalkie_big_nohaplotig	exon	124330470	124330478	100	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 2558 2566 -
Chr1	stalkie_big_nohaplotig	exon	124334219	124335044	99	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 1738 2557 -
Chr1	stalkie_big_nohaplotig	exon	124355576	124355766	100	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 1547 1737 -
Chr1	stalkie_big_nohaplotig	exon	124355838	124355921	100	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 1463 1546 -
Chr1	stalkie_big_nohaplotig	exon	124359385	124359495	100	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 1352 1462 -
Chr1	stalkie_big_nohaplotig	exon	124359575	124359812	100	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 1114 1351 -
Chr1	stalkie_big_nohaplotig	exon	124359890	124360083	100	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 920 1113 -
Chr1	stalkie_big_nohaplotig	exon	124362367	124362556	100	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 730 919 -
Chr1	stalkie_big_nohaplotig	exon	124362785	124362943	100	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 571 729 -
Chr1	stalkie_big_nohaplotig	exon	124366517	124366712	98	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 372 570 -
Chr1	stalkie_big_nohaplotig	exon	124366884	124367250	100	+	.	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 5 371 -
Chr1	stalkie_big_nohaplotig	CDS	124334618	124335044	.	+	0	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 1738 2164 .
Chr1	stalkie_big_nohaplotig	CDS	124355576	124355766	.	+	2	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 1547 1737 .
Chr1	stalkie_big_nohaplotig	CDS	124355838	124355921	.	+	0	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 1463 1546 .
Chr1	stalkie_big_nohaplotig	CDS	124359385	124359495	.	+	0	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 1352 1462 .
Chr1	stalkie_big_nohaplotig	CDS	124359575	124359812	.	+	0	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 1114 1351 .
Chr1	stalkie_big_nohaplotig	CDS	124359890	124360083	.	+	2	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 920 1113 .
Chr1	stalkie_big_nohaplotig	CDS	124362367	124362556	.	+	0	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 730 919 .
Chr1	stalkie_big_nohaplotig	CDS	124362785	124362943	.	+	2	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 571 729 .
Chr1	stalkie_big_nohaplotig	CDS	124366517	124366596	.	+	2	Parent=comp162718_c3_seq1.mrna1;Target=comp162718_c3_seq1 488 570 .
Chr1	stalkie_big_nohaplotig	mRNA	124192898	124366593	.	+	.	ID=FBgn0003371.1.mrna1;geneID=FBgn0003371.1.path1;Name=FBgn0003371.1;Dir=sensecoverage=87.1;identity=97.5;matches=2263;mismatches=15;indels=42;unknowns=0;locus=RLOC_00010786
Chr1	stalkie_big_nohaplotig	exon	124192898	124192900	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 367 369 +
Chr1	stalkie_big_nohaplotig	exon	124192904	124192912	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 415 423 +
Chr1	stalkie_big_nohaplotig	exon	124192927	124192934	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 463 470 +
Chr1	stalkie_big_nohaplotig	exon	124208483	124208511	53	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 483 521 +
Chr1	stalkie_big_nohaplotig	exon	124209487	124209492	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 522 527 +
Chr1	stalkie_big_nohaplotig	exon	124211426	124211432	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 528 534 +
Chr1	stalkie_big_nohaplotig	exon	124216424	124216430	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 535 541 +
Chr1	stalkie_big_nohaplotig	exon	124239658	124239663	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 542 547 +
Chr1	stalkie_big_nohaplotig	exon	124243849	124243854	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 548 553 +
Chr1	stalkie_big_nohaplotig	exon	124250983	124250992	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 554 563 +
Chr1	stalkie_big_nohaplotig	exon	124251938	124251947	80	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 564 573 +
Chr1	stalkie_big_nohaplotig	exon	124260118	124260120	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 574 576 +
Chr1	stalkie_big_nohaplotig	exon	124264915	124264926	83	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 577 588 +
Chr1	stalkie_big_nohaplotig	exon	124268132	124268141	90	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 589 598 +
Chr1	stalkie_big_nohaplotig	exon	124275254	124275261	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 599 606 +
Chr1	stalkie_big_nohaplotig	exon	124292295	124292302	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 616 623 +
Chr1	stalkie_big_nohaplotig	exon	124305894	124305904	72	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 631 641 +
Chr1	stalkie_big_nohaplotig	exon	124307966	124307973	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 642 649 +
Chr1	stalkie_big_nohaplotig	exon	124313828	124313831	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 650 653 +
Chr1	stalkie_big_nohaplotig	exon	124320464	124320471	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 713 720 +
Chr1	stalkie_big_nohaplotig	exon	124327628	124327632	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 725 729 +
Chr1	stalkie_big_nohaplotig	exon	124328071	124328114	54	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 730 754 +
Chr1	stalkie_big_nohaplotig	exon	124330470	124330478	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 760 768 +
Chr1	stalkie_big_nohaplotig	exon	124334219	124335044	99	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 769 1588 +
Chr1	stalkie_big_nohaplotig	exon	124355576	124355766	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 1589 1779 +
Chr1	stalkie_big_nohaplotig	exon	124355838	124355921	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 1780 1863 +
Chr1	stalkie_big_nohaplotig	exon	124359385	124359495	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 1864 1974 +
Chr1	stalkie_big_nohaplotig	exon	124359575	124359812	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 1975 2212 +
Chr1	stalkie_big_nohaplotig	exon	124359890	124360083	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 2213 2406 +
Chr1	stalkie_big_nohaplotig	exon	124362367	124362556	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 2407 2596 +
Chr1	stalkie_big_nohaplotig	exon	124362785	124362943	100	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 2597 2755 +
Chr1	stalkie_big_nohaplotig	exon	124366517	124366593	96	+	.	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 2756 2835 +
Chr1	stalkie_big_nohaplotig	CDS	124334618	124335044	.	+	0	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 1162 1588 +
Chr1	stalkie_big_nohaplotig	CDS	124355576	124355766	.	+	2	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 1589 1779 +
Chr1	stalkie_big_nohaplotig	CDS	124355838	124355921	.	+	0	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 1780 1863 +
Chr1	stalkie_big_nohaplotig	CDS	124359385	124359495	.	+	0	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 1864 1974 +
Chr1	stalkie_big_nohaplotig	CDS	124359575	124359812	.	+	0	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 1975 2212 +
Chr1	stalkie_big_nohaplotig	CDS	124359890	124360083	.	+	2	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 2213 2406 +
Chr1	stalkie_big_nohaplotig	CDS	124362367	124362556	.	+	0	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 2407 2596 +
Chr1	stalkie_big_nohaplotig	CDS	124362785	124362943	.	+	2	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 2597 2755 +
Chr1	stalkie_big_nohaplotig	CDS	124366517	124366593	.	+	2	Parent=FBgn0003371.1.mrna1;Target=FBgn0003371.1 2756 2835 +
Chr1	stalkie_big_nohaplotig	mRNA	124235502	124244702	.	+	.	ID=FBgn0261922.1.mrna1;geneID=FBgn0261922.1.path1;Name=FBgn0261922.1;Dir=sensecoverage=100.0;identity=99.6;matches=6277;mismatches=23;indels=0;unknowns=0;locus=RLOC_00010786
Chr1	stalkie_big_nohaplotig	exon	124235502	124235612	100	+	.	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 1 111 +
Chr1	stalkie_big_nohaplotig	exon	124235689	124235902	99	+	.	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 112 325 +
Chr1	stalkie_big_nohaplotig	exon	124236997	124238013	99	+	.	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 326 1342 +
Chr1	stalkie_big_nohaplotig	exon	124238592	124239084	98	+	.	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 1343 1835 +
Chr1	stalkie_big_nohaplotig	exon	124239812	124240783	100	+	.	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 1836 2807 +
Chr1	stalkie_big_nohaplotig	exon	124240843	124241527	99	+	.	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 2808 3492 +
Chr1	stalkie_big_nohaplotig	exon	124241589	124241706	99	+	.	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 3493 3610 +
Chr1	stalkie_big_nohaplotig	exon	124241766	124242719	99	+	.	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 3611 4564 +
Chr1	stalkie_big_nohaplotig	exon	124242774	124243690	99	+	.	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 4565 5481 +
Chr1	stalkie_big_nohaplotig	exon	124243750	124243938	100	+	.	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 5482 5670 +
Chr1	stalkie_big_nohaplotig	exon	124244003	124244249	98	+	.	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 5671 5917 +
Chr1	stalkie_big_nohaplotig	exon	124244320	124244702	99	+	.	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 5918 6300 +
Chr1	stalkie_big_nohaplotig	CDS	124235502	124235612	.	+	0	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 1 111 +
Chr1	stalkie_big_nohaplotig	CDS	124235689	124235902	.	+	0	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 112 325 +
Chr1	stalkie_big_nohaplotig	CDS	124236997	124238013	.	+	2	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 326 1342 +
Chr1	stalkie_big_nohaplotig	CDS	124238592	124239084	.	+	2	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 1343 1835 +
Chr1	stalkie_big_nohaplotig	CDS	124239812	124240783	.	+	1	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 1836 2807 +
Chr1	stalkie_big_nohaplotig	CDS	124240843	124241527	.	+	1	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 2808 3492 +
Chr1	stalkie_big_nohaplotig	CDS	124241589	124241706	.	+	0	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 3493 3610 +
Chr1	stalkie_big_nohaplotig	CDS	124241766	124242719	.	+	2	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 3611 4564 +
Chr1	stalkie_big_nohaplotig	CDS	124242774	124243690	.	+	2	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 4565 5481 +
Chr1	stalkie_big_nohaplotig	CDS	124243750	124243938	.	+	0	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 5482 5670 +
Chr1	stalkie_big_nohaplotig	CDS	124244003	124244249	.	+	0	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 5671 5917 +
Chr1	stalkie_big_nohaplotig	CDS	124244320	124244702	.	+	2	Parent=FBgn0261922.1.mrna1;Target=FBgn0261922.1 5918 6300 +
Chr1	stalkie_big_nohaplotig	mRNA	124280288	124355594	.	+	.	ID=comp153075_c0_seq1.mrna1;geneID=comp153075_c0_seq1.path1;Name=comp153075_c0_seq1;Dir=antisensecoverage=57.8;identity=99.6;matches=533;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010786
Chr1	stalkie_big_nohaplotig	exon	124280288	124280290	100	+	.	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 532 534 -
Chr1	stalkie_big_nohaplotig	exon	124295114	124295118	100	+	.	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 527 531 -
Chr1	stalkie_big_nohaplotig	exon	124303296	124303300	100	+	.	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 522 526 -
Chr1	stalkie_big_nohaplotig	exon	124305329	124305333	100	+	.	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 517 521 -
Chr1	stalkie_big_nohaplotig	exon	124312143	124312150	100	+	.	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 509 516 -
Chr1	stalkie_big_nohaplotig	exon	124318821	124318822	100	+	.	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 507 508 -
Chr1	stalkie_big_nohaplotig	exon	124331330	124331333	100	+	.	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 503 506 -
Chr1	stalkie_big_nohaplotig	exon	124338871	124338873	100	+	.	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 500 502 -
Chr1	stalkie_big_nohaplotig	exon	124339025	124339026	100	+	.	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 498 499 -
Chr1	stalkie_big_nohaplotig	exon	124339634	124339640	100	+	.	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 491 497 -
Chr1	stalkie_big_nohaplotig	exon	124342671	124342680	80	+	.	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 481 490 -
Chr1	stalkie_big_nohaplotig	exon	124345556	124345561	100	+	.	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 475 480 -
Chr1	stalkie_big_nohaplotig	exon	124347704	124347708	100	+	.	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 470 474 -
Chr1	stalkie_big_nohaplotig	exon	124348324	124348653	100	+	.	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 140 469 -
Chr1	stalkie_big_nohaplotig	exon	124352094	124352213	100	+	.	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 20 139 -
Chr1	stalkie_big_nohaplotig	exon	124355576	124355594	100	+	.	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 1 19 -
Chr1	stalkie_big_nohaplotig	CDS	124280288	124280290	.	+	2	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 532 534 .
Chr1	stalkie_big_nohaplotig	CDS	124295114	124295118	.	+	2	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 527 531 .
Chr1	stalkie_big_nohaplotig	CDS	124303296	124303300	.	+	0	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 522 526 .
Chr1	stalkie_big_nohaplotig	CDS	124305329	124305333	.	+	1	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 517 521 .
Chr1	stalkie_big_nohaplotig	CDS	124312143	124312150	.	+	2	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 509 516 .
Chr1	stalkie_big_nohaplotig	CDS	124318821	124318822	.	+	0	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 507 508 .
Chr1	stalkie_big_nohaplotig	CDS	124331330	124331333	.	+	1	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 503 506 .
Chr1	stalkie_big_nohaplotig	CDS	124338871	124338873	.	+	0	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 500 502 .
Chr1	stalkie_big_nohaplotig	CDS	124339025	124339026	.	+	0	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 498 499 .
Chr1	stalkie_big_nohaplotig	CDS	124339634	124339640	.	+	1	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 491 497 .
Chr1	stalkie_big_nohaplotig	CDS	124342671	124342680	.	+	0	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 481 490 .
Chr1	stalkie_big_nohaplotig	CDS	124345556	124345561	.	+	2	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 475 480 .
Chr1	stalkie_big_nohaplotig	CDS	124347704	124347708	.	+	2	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 470 474 .
Chr1	stalkie_big_nohaplotig	CDS	124348324	124348653	.	+	0	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 140 469 .
Chr1	stalkie_big_nohaplotig	CDS	124352094	124352213	.	+	0	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 20 139 .
Chr1	stalkie_big_nohaplotig	CDS	124355576	124355592	.	+	0	Parent=comp153075_c0_seq1.mrna1;Target=comp153075_c0_seq1 3 19 .
Chr1	gffcl	locus	123720073	123720537	.	+	.	ID=RLOC_00010787;geneIDs=FBgn0030443.path1;transcripts=FBgn0030443.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123720073	123720537	.	+	.	ID=FBgn0030443.mrna1;geneID=FBgn0030443.path1;Name=FBgn0030443;Dir=indeterminatecoverage=100.0;identity=99.6;matches=463;mismatches=2;indels=0;unknowns=0;Target=FBgn0030443 465 1 .;locus=RLOC_00010787
Chr1	stalkie_big_nohaplotig	exon	123720073	123720537	99	+	.	Parent=FBgn0030443.mrna1
Chr1	stalkie_big_nohaplotig	CDS	123720073	123720537	.	+	0	Parent=FBgn0030443.mrna1
Chr1	gffcl	locus	123730063	123731646	.	+	.	ID=RLOC_00010788;geneIDs=FBgn0040363.2.path1;transcripts=FBgn0040363.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123730063	123731646	.	+	.	ID=FBgn0040363.2.mrna1;geneID=FBgn0040363.2.path1;Name=FBgn0040363.2;Dir=sensecoverage=100.0;identity=98.5;matches=1507;mismatches=23;indels=0;unknowns=0;locus=RLOC_00010788
Chr1	stalkie_big_nohaplotig	exon	123730063	123730219	100	+	.	Parent=FBgn0040363.2.mrna1;Target=FBgn0040363.2 1 157 +
Chr1	stalkie_big_nohaplotig	exon	123730274	123731646	98	+	.	Parent=FBgn0040363.2.mrna1;Target=FBgn0040363.2 158 1530 +
Chr1	stalkie_big_nohaplotig	CDS	123730063	123730219	.	+	0	Parent=FBgn0040363.2.mrna1;Target=FBgn0040363.2 1 157 +
Chr1	stalkie_big_nohaplotig	CDS	123730274	123731646	.	+	2	Parent=FBgn0040363.2.mrna1;Target=FBgn0040363.2 158 1530 +
Chr1	gffcl	locus	123770303	123771577	.	+	.	ID=RLOC_00010789;geneIDs=ORF1366.path1;transcripts=ORF1366.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123770303	123771577	.	+	.	ID=ORF1366.mrna1;geneID=ORF1366.path1;Name=ORF1366;Dir=sensecoverage=100.0;identity=100.0;matches=1125;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010789
Chr1	stalkie_big_nohaplotig	exon	123770303	123770372	100	+	.	Parent=ORF1366.mrna1;Target=ORF1366 1 70 +
Chr1	stalkie_big_nohaplotig	exon	123770454	123770573	100	+	.	Parent=ORF1366.mrna1;Target=ORF1366 71 190 +
Chr1	stalkie_big_nohaplotig	exon	123770643	123771577	100	+	.	Parent=ORF1366.mrna1;Target=ORF1366 191 1125 +
Chr1	stalkie_big_nohaplotig	CDS	123770303	123770372	.	+	0	Parent=ORF1366.mrna1;Target=ORF1366 1 70 +
Chr1	stalkie_big_nohaplotig	CDS	123770454	123770573	.	+	2	Parent=ORF1366.mrna1;Target=ORF1366 71 190 +
Chr1	stalkie_big_nohaplotig	CDS	123770643	123771577	.	+	2	Parent=ORF1366.mrna1;Target=ORF1366 191 1125 +
Chr1	gffcl	locus	123775214	123886151	.	.	.	ID=RLOC_00010790;geneIDs=FBgn0036262.1.path1,comp118203_c0_seq1.path1,comp157309_c1_seq1.path1,comp161058_c0_seq1.path1,comp538147_c0_seq1.path1;transcripts=comp157309_c1_seq1.mrna1,FBgn0036262.1.mrna1,comp538147_c0_seq1.mrna1,comp161058_c0_seq1.mrna1,comp118203_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123775214	123886151	.	+	.	ID=comp157309_c1_seq1.mrna1;geneID=comp157309_c1_seq1.path1;Name=comp157309_c1_seq1;Dir=antisensecoverage=92.4;identity=96.3;matches=1054;mismatches=24;indels=17;unknowns=0;locus=RLOC_00010790
Chr1	stalkie_big_nohaplotig	exon	123775214	123775219	100	+	.	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 1121 1126 -
Chr1	stalkie_big_nohaplotig	exon	123783137	123783139	100	+	.	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 1118 1120 -
Chr1	stalkie_big_nohaplotig	exon	123783214	123783217	100	+	.	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 1114 1117 -
Chr1	stalkie_big_nohaplotig	exon	123798039	123798051	84	+	.	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 1101 1113 -
Chr1	stalkie_big_nohaplotig	exon	123798323	123798370	57	+	.	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 1047 1100 -
Chr1	stalkie_big_nohaplotig	exon	123807313	123807316	100	+	.	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 1043 1046 -
Chr1	stalkie_big_nohaplotig	exon	123819403	123819411	100	+	.	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 1034 1042 -
Chr1	stalkie_big_nohaplotig	exon	123835260	123835268	100	+	.	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 1025 1033 -
Chr1	stalkie_big_nohaplotig	exon	123843299	123843300	100	+	.	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 1023 1024 -
Chr1	stalkie_big_nohaplotig	exon	123854838	123854842	100	+	.	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 1018 1022 -
Chr1	stalkie_big_nohaplotig	exon	123863500	123863503	100	+	.	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 1014 1017 -
Chr1	stalkie_big_nohaplotig	exon	123864382	123864385	100	+	.	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 1010 1013 -
Chr1	stalkie_big_nohaplotig	exon	123870887	123870888	100	+	.	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 1008 1009 -
Chr1	stalkie_big_nohaplotig	exon	123873248	123873252	100	+	.	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 1003 1007 -
Chr1	stalkie_big_nohaplotig	exon	123873747	123873751	100	+	.	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 998 1002 -
Chr1	stalkie_big_nohaplotig	exon	123883603	123883614	91	+	.	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 956 967 -
Chr1	stalkie_big_nohaplotig	exon	123884970	123884979	90	+	.	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 946 955 -
Chr1	stalkie_big_nohaplotig	exon	123885044	123885137	98	+	.	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 852 945 -
Chr1	stalkie_big_nohaplotig	exon	123885191	123885272	98	+	.	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 770 851 -
Chr1	stalkie_big_nohaplotig	exon	123885326	123885754	98	+	.	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 341 769 -
Chr1	stalkie_big_nohaplotig	exon	123885819	123886151	98	+	.	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 9 340 -
Chr1	stalkie_big_nohaplotig	CDS	123775215	123775219	.	+	0	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 1121 1125 .
Chr1	stalkie_big_nohaplotig	CDS	123783137	123783139	.	+	1	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 1118 1120 .
Chr1	stalkie_big_nohaplotig	CDS	123783214	123783217	.	+	1	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 1114 1117 .
Chr1	stalkie_big_nohaplotig	CDS	123798039	123798051	.	+	0	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 1101 1113 .
Chr1	stalkie_big_nohaplotig	CDS	123798323	123798338	.	+	2	Parent=comp157309_c1_seq1.mrna1;Target=comp157309_c1_seq1 1090 1100 .
Chr1	stalkie_big_nohaplotig	mRNA	123868878	123873775	.	+	.	ID=FBgn0036262.1.mrna1;geneID=FBgn0036262.1.path1;Name=FBgn0036262.1;Dir=sensecoverage=100.0;identity=99.8;matches=880;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010790
Chr1	stalkie_big_nohaplotig	exon	123868878	123868901	100	+	.	Parent=FBgn0036262.1.mrna1;Target=FBgn0036262.1 1 24 +
Chr1	stalkie_big_nohaplotig	exon	123869057	123869231	100	+	.	Parent=FBgn0036262.1.mrna1;Target=FBgn0036262.1 25 199 +
Chr1	stalkie_big_nohaplotig	exon	123873028	123873604	99	+	.	Parent=FBgn0036262.1.mrna1;Target=FBgn0036262.1 200 776 +
Chr1	stalkie_big_nohaplotig	exon	123873670	123873775	100	+	.	Parent=FBgn0036262.1.mrna1;Target=FBgn0036262.1 777 882 +
Chr1	stalkie_big_nohaplotig	CDS	123868878	123868901	.	+	0	Parent=FBgn0036262.1.mrna1;Target=FBgn0036262.1 1 24 +
Chr1	stalkie_big_nohaplotig	CDS	123869057	123869231	.	+	0	Parent=FBgn0036262.1.mrna1;Target=FBgn0036262.1 25 199 +
Chr1	stalkie_big_nohaplotig	CDS	123873028	123873604	.	+	2	Parent=FBgn0036262.1.mrna1;Target=FBgn0036262.1 200 776 +
Chr1	stalkie_big_nohaplotig	CDS	123873670	123873775	.	+	1	Parent=FBgn0036262.1.mrna1;Target=FBgn0036262.1 777 882 +
Chr1	stalkie_big_nohaplotig	mRNA	123868879	123869079	.	-	.	ID=comp538147_c0_seq1.mrna1;geneID=comp538147_c0_seq1.path1;Name=comp538147_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=201;mismatches=0;indels=0;unknowns=0;Target=comp538147_c0_seq1 201 1 .;CDS_Target=comp538147_c0_seq1 41 3 .;locus=RLOC_00010790
Chr1	stalkie_big_nohaplotig	exon	123868879	123869079	100	-	.	Parent=comp538147_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	123869039	123869077	.	-	0	Parent=comp538147_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123869263	123871409	.	+	.	ID=comp161058_c0_seq1.mrna1;geneID=comp161058_c0_seq1.path1;Name=comp161058_c0_seq1;Dir=indeterminatecoverage=100.0;identity=88.0;matches=2035;mismatches=96;indels=181;unknowns=0;Target=comp161058_c0_seq1 2296 1 .;CDS_Target=comp161058_c0_seq1 2093 2073 .;locus=RLOC_00010790
Chr1	stalkie_big_nohaplotig	exon	123869263	123871409	88	+	.	Parent=comp161058_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	123871185	123871205	.	+	0	Parent=comp161058_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123872832	123873037	.	+	.	ID=comp118203_c0_seq1.mrna1;geneID=comp118203_c0_seq1.path1;Name=comp118203_c0_seq1;Dir=indeterminatecoverage=84.9;identity=92.2;matches=202;mismatches=4;indels=13;unknowns=0;Target=comp118203_c0_seq1 256 38 .;CDS_Target=comp118203_c0_seq1 141 40 .;locus=RLOC_00010790
Chr1	stalkie_big_nohaplotig	exon	123872832	123873037	92	+	.	Parent=comp118203_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	123872834	123872935	.	+	0	Parent=comp118203_c0_seq1.mrna1
Chr1	gffcl	locus	123848870	123856964	.	+	.	ID=RLOC_00010791;geneIDs=FBgn0262719.1.path1;transcripts=FBgn0262719.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123848870	123856964	.	+	.	ID=FBgn0262719.1.mrna1;geneID=FBgn0262719.1.path1;Name=FBgn0262719.1;Dir=sensecoverage=98.2;identity=99.6;matches=7703;mismatches=28;indels=0;unknowns=0;locus=RLOC_00010791
Chr1	stalkie_big_nohaplotig	exon	123848870	123850645	99	+	.	Parent=FBgn0262719.1.mrna1;Target=FBgn0262719.1 142 1917 +
Chr1	stalkie_big_nohaplotig	exon	123850736	123852077	99	+	.	Parent=FBgn0262719.1.mrna1;Target=FBgn0262719.1 1918 3259 +
Chr1	stalkie_big_nohaplotig	exon	123852159	123852278	100	+	.	Parent=FBgn0262719.1.mrna1;Target=FBgn0262719.1 3260 3379 +
Chr1	stalkie_big_nohaplotig	exon	123852337	123854002	99	+	.	Parent=FBgn0262719.1.mrna1;Target=FBgn0262719.1 3380 5045 +
Chr1	stalkie_big_nohaplotig	exon	123854073	123854806	99	+	.	Parent=FBgn0262719.1.mrna1;Target=FBgn0262719.1 5046 5779 +
Chr1	stalkie_big_nohaplotig	exon	123854872	123856964	99	+	.	Parent=FBgn0262719.1.mrna1;Target=FBgn0262719.1 5780 7872 +
Chr1	stalkie_big_nohaplotig	CDS	123848870	123850645	.	+	0	Parent=FBgn0262719.1.mrna1;Target=FBgn0262719.1 142 1917 +
Chr1	stalkie_big_nohaplotig	CDS	123850736	123852077	.	+	0	Parent=FBgn0262719.1.mrna1;Target=FBgn0262719.1 1918 3259 +
Chr1	stalkie_big_nohaplotig	CDS	123852159	123852278	.	+	2	Parent=FBgn0262719.1.mrna1;Target=FBgn0262719.1 3260 3379 +
Chr1	stalkie_big_nohaplotig	CDS	123852337	123854002	.	+	2	Parent=FBgn0262719.1.mrna1;Target=FBgn0262719.1 3380 5045 +
Chr1	stalkie_big_nohaplotig	CDS	123854073	123854806	.	+	1	Parent=FBgn0262719.1.mrna1;Target=FBgn0262719.1 5046 5779 +
Chr1	stalkie_big_nohaplotig	CDS	123854872	123856964	.	+	2	Parent=FBgn0262719.1.mrna1;Target=FBgn0262719.1 5780 7872 +
Chr1	gffcl	locus	123874101	123879669	.	-	.	ID=RLOC_00010793;geneIDs=FBgn0003638.1.path1,comp146919_c0_seq1.path1;transcripts=comp146919_c0_seq1.mrna1,FBgn0003638.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123874101	123877280	.	-	.	ID=comp146919_c0_seq1.mrna1;geneID=comp146919_c0_seq1.path1;Name=comp146919_c0_seq1;Dir=indeterminatecoverage=86.4;identity=99.1;matches=1261;mismatches=11;indels=0;unknowns=0;Target=comp146919_c0_seq1 942 769 .;locus=RLOC_00010793
Chr1	stalkie_big_nohaplotig	exon	123874101	123875367	99	-	.	Parent=comp146919_c0_seq1.mrna1;Target=comp146919_c0_seq1 1472 206 .
Chr1	stalkie_big_nohaplotig	exon	123877276	123877280	80	-	.	Parent=comp146919_c0_seq1.mrna1;Target=comp146919_c0_seq1 205 201 .
Chr1	stalkie_big_nohaplotig	CDS	123874631	123874804	.	-	0	Parent=comp146919_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123875599	123879669	.	-	.	ID=FBgn0003638.1.mrna1;geneID=FBgn0003638.1.path1;Name=FBgn0003638.1;Dir=sensecoverage=100.0;identity=99.8;matches=2520;mismatches=6;indels=0;unknowns=0;locus=RLOC_00010793
Chr1	stalkie_big_nohaplotig	exon	123875599	123876356	100	-	.	Parent=FBgn0003638.1.mrna1;Target=FBgn0003638.1 1769 2526 +
Chr1	stalkie_big_nohaplotig	exon	123876580	123876708	100	-	.	Parent=FBgn0003638.1.mrna1;Target=FBgn0003638.1 1640 1768 +
Chr1	stalkie_big_nohaplotig	exon	123876774	123877154	99	-	.	Parent=FBgn0003638.1.mrna1;Target=FBgn0003638.1 1259 1639 +
Chr1	stalkie_big_nohaplotig	exon	123877221	123878187	99	-	.	Parent=FBgn0003638.1.mrna1;Target=FBgn0003638.1 292 1258 +
Chr1	stalkie_big_nohaplotig	exon	123879379	123879669	99	-	.	Parent=FBgn0003638.1.mrna1;Target=FBgn0003638.1 1 291 +
Chr1	stalkie_big_nohaplotig	CDS	123875599	123876356	.	-	2	Parent=FBgn0003638.1.mrna1;Target=FBgn0003638.1 1769 2526 +
Chr1	stalkie_big_nohaplotig	CDS	123876580	123876708	.	-	2	Parent=FBgn0003638.1.mrna1;Target=FBgn0003638.1 1640 1768 +
Chr1	stalkie_big_nohaplotig	CDS	123876774	123877154	.	-	2	Parent=FBgn0003638.1.mrna1;Target=FBgn0003638.1 1259 1639 +
Chr1	stalkie_big_nohaplotig	CDS	123877221	123878187	.	-	0	Parent=FBgn0003638.1.mrna1;Target=FBgn0003638.1 292 1258 +
Chr1	stalkie_big_nohaplotig	CDS	123879379	123879669	.	-	0	Parent=FBgn0003638.1.mrna1;Target=FBgn0003638.1 1 291 +
Chr1	gffcl	locus	123879773	123883340	.	+	.	ID=RLOC_00010794;geneIDs=comp163488_c0_seq1.path1;transcripts=comp163488_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123879773	123883340	.	+	.	ID=comp163488_c0_seq1.mrna1;geneID=comp163488_c0_seq1.path1;Name=comp163488_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=3519;mismatches=29;indels=38;unknowns=0;Target=comp163488_c0_seq1 1130 984 .;locus=RLOC_00010794
Chr1	stalkie_big_nohaplotig	exon	123879773	123881780	98	+	.	Parent=comp163488_c0_seq1.mrna1;Target=comp163488_c0_seq1 1996 1 .
Chr1	stalkie_big_nohaplotig	exon	123881782	123881810	68	+	.	Parent=comp163488_c0_seq1.mrna1;Target=comp163488_c0_seq1 2114 2086 .
Chr1	stalkie_big_nohaplotig	exon	123881815	123883340	97	+	.	Parent=comp163488_c0_seq1.mrna1;Target=comp163488_c0_seq1 3752 2207 .
Chr1	stalkie_big_nohaplotig	CDS	123880770	123880916	.	+	0	Parent=comp163488_c0_seq1.mrna1
Chr1	gffcl	locus	123880149	123883205	.	-	.	ID=RLOC_00010795;geneIDs=FBgn0003638.path1;transcripts=FBgn0003638.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123880149	123883205	.	-	.	ID=FBgn0003638.mrna1;geneID=FBgn0003638.path1;Name=FBgn0003638;Dir=sensecoverage=100.0;identity=99.6;matches=520;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010795
Chr1	stalkie_big_nohaplotig	exon	123880149	123880404	100	-	.	Parent=FBgn0003638.mrna1;Target=FBgn0003638 267 522 +
Chr1	stalkie_big_nohaplotig	exon	123882940	123883205	99	-	.	Parent=FBgn0003638.mrna1;Target=FBgn0003638 1 266 +
Chr1	stalkie_big_nohaplotig	CDS	123880149	123880404	.	-	1	Parent=FBgn0003638.mrna1;Target=FBgn0003638 267 522 +
Chr1	stalkie_big_nohaplotig	CDS	123882940	123883205	.	-	0	Parent=FBgn0003638.mrna1;Target=FBgn0003638 1 266 +
Chr1	gffcl	locus	123890656	123893583	.	-	.	ID=RLOC_00010796;geneIDs=FBgn0026876.1.path1;transcripts=FBgn0026876.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123890656	123893583	.	-	.	ID=FBgn0026876.1.mrna1;geneID=FBgn0026876.1.path1;Name=FBgn0026876.1;Dir=sensecoverage=100.0;identity=99.0;matches=2702;mismatches=28;indels=0;unknowns=0;locus=RLOC_00010796
Chr1	stalkie_big_nohaplotig	exon	123890656	123891291	99	-	.	Parent=FBgn0026876.1.mrna1;Target=FBgn0026876.1 2095 2730 +
Chr1	stalkie_big_nohaplotig	exon	123891353	123891550	98	-	.	Parent=FBgn0026876.1.mrna1;Target=FBgn0026876.1 1897 2094 +
Chr1	stalkie_big_nohaplotig	exon	123891624	123892814	98	-	.	Parent=FBgn0026876.1.mrna1;Target=FBgn0026876.1 706 1896 +
Chr1	stalkie_big_nohaplotig	exon	123892879	123893583	99	-	.	Parent=FBgn0026876.1.mrna1;Target=FBgn0026876.1 1 705 +
Chr1	stalkie_big_nohaplotig	CDS	123890656	123891291	.	-	0	Parent=FBgn0026876.1.mrna1;Target=FBgn0026876.1 2095 2730 +
Chr1	stalkie_big_nohaplotig	CDS	123891353	123891550	.	-	0	Parent=FBgn0026876.1.mrna1;Target=FBgn0026876.1 1897 2094 +
Chr1	stalkie_big_nohaplotig	CDS	123891624	123892814	.	-	0	Parent=FBgn0026876.1.mrna1;Target=FBgn0026876.1 706 1896 +
Chr1	stalkie_big_nohaplotig	CDS	123892879	123893583	.	-	0	Parent=FBgn0026876.1.mrna1;Target=FBgn0026876.1 1 705 +
Chr1	gffcl	locus	123899352	123900898	.	-	.	ID=RLOC_00010798;geneIDs=FBgn0029854.1.path1;transcripts=FBgn0029854.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123899352	123900898	.	-	.	ID=FBgn0029854.1.mrna1;geneID=FBgn0029854.1.path1;Name=FBgn0029854.1;Dir=sensecoverage=100.0;identity=99.5;matches=382;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010798
Chr1	stalkie_big_nohaplotig	exon	123899352	123899430	100	-	.	Parent=FBgn0029854.1.mrna1;Target=FBgn0029854.1 306 384 +
Chr1	stalkie_big_nohaplotig	exon	123900408	123900476	100	-	.	Parent=FBgn0029854.1.mrna1;Target=FBgn0029854.1 237 305 +
Chr1	stalkie_big_nohaplotig	exon	123900587	123900675	100	-	.	Parent=FBgn0029854.1.mrna1;Target=FBgn0029854.1 148 236 +
Chr1	stalkie_big_nohaplotig	exon	123900752	123900898	98	-	.	Parent=FBgn0029854.1.mrna1;Target=FBgn0029854.1 1 147 +
Chr1	stalkie_big_nohaplotig	CDS	123899352	123899430	.	-	1	Parent=FBgn0029854.1.mrna1;Target=FBgn0029854.1 306 384 +
Chr1	stalkie_big_nohaplotig	CDS	123900408	123900476	.	-	1	Parent=FBgn0029854.1.mrna1;Target=FBgn0029854.1 237 305 +
Chr1	stalkie_big_nohaplotig	CDS	123900587	123900675	.	-	0	Parent=FBgn0029854.1.mrna1;Target=FBgn0029854.1 148 236 +
Chr1	stalkie_big_nohaplotig	CDS	123900752	123900898	.	-	0	Parent=FBgn0029854.1.mrna1;Target=FBgn0029854.1 1 147 +
Chr1	gffcl	locus	123901936	123925360	.	-	.	ID=RLOC_00010799;geneIDs=FBgn0003943.path1,FBgn0086558.path1,comp136102_c0_seq1.path1;transcripts=comp136102_c0_seq1.mrna1,FBgn0086558.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123901936	123925360	.	-	.	ID=comp136102_c0_seq1.mrna1;geneID=comp136102_c0_seq1.path1;Name=comp136102_c0_seq1;Dir=indeterminatecoverage=36.6;identity=95.1;matches=250;mismatches=13;indels=0;unknowns=0;Target=comp136102_c0_seq1 488 360 .;locus=RLOC_00010799
Chr1	stalkie_big_nohaplotig	exon	123901936	123902183	94	-	.	Parent=comp136102_c0_seq1.mrna1;Target=comp136102_c0_seq1 507 260 .
Chr1	stalkie_big_nohaplotig	exon	123906913	123906916	100	-	.	Parent=comp136102_c0_seq1.mrna1;Target=comp136102_c0_seq1 259 256 .
Chr1	stalkie_big_nohaplotig	exon	123919571	123919573	100	-	.	Parent=comp136102_c0_seq1.mrna1;Target=comp136102_c0_seq1 255 253 .
Chr1	stalkie_big_nohaplotig	exon	123925353	123925360	100	-	.	Parent=comp136102_c0_seq1.mrna1;Target=comp136102_c0_seq1 252 245 .
Chr1	stalkie_big_nohaplotig	CDS	123901955	123902083	.	-	0	Parent=comp136102_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123919517	123919864	.	-	.	ID=FBgn0086558.mrna1;geneID=FBgn0086558.path1;Name=FBgn0086558;Dir=indeterminatecoverage=100.0;identity=96.0;matches=334;mismatches=14;indels=0;unknowns=0;Target=FBgn0086558 348 1 .;locus=RLOC_00010799
Chr1	stalkie_big_nohaplotig	exon	123919517	123919864	95	-	.	Parent=FBgn0086558.mrna1
Chr1	stalkie_big_nohaplotig	CDS	123919517	123919864	.	-	0	Parent=FBgn0086558.mrna1
Chr1	gffcl	locus	123911386	123922889	.	.	.	ID=RLOC_00010801;geneIDs=FBgn0003941.path1,Dictyostelium.path1,comp146542_c0_seq1.path1,comp158952_c1_seq1.path1;transcripts=Dictyostelium.mrna1,comp146542_c0_seq1.mrna1,comp158952_c1_seq1.mrna1,FBgn0003941.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123911605	123915731	.	-	.	ID=comp146542_c0_seq1.mrna1;geneID=comp146542_c0_seq1.path1;Name=comp146542_c0_seq1;Dir=sensecoverage=98.9;identity=99.8;matches=462;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010801
Chr1	stalkie_big_nohaplotig	exon	123911605	123911732	100	-	.	Parent=comp146542_c0_seq1.mrna1;Target=comp146542_c0_seq1 341 468 +
Chr1	stalkie_big_nohaplotig	exon	123915397	123915731	99	-	.	Parent=comp146542_c0_seq1.mrna1;Target=comp146542_c0_seq1 6 340 +
Chr1	stalkie_big_nohaplotig	CDS	123911706	123911732	.	-	0	Parent=comp146542_c0_seq1.mrna1;Target=comp146542_c0_seq1 341 367 +
Chr1	stalkie_big_nohaplotig	CDS	123915397	123915609	.	-	0	Parent=comp146542_c0_seq1.mrna1;Target=comp146542_c0_seq1 128 340 +
Chr1	stalkie_big_nohaplotig	mRNA	123921825	123922889	.	+	.	ID=comp158952_c1_seq1.mrna1;geneID=comp158952_c1_seq1.path1;Name=comp158952_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=547;mismatches=3;indels=0;unknowns=0;Target=comp158952_c1_seq1 124 2 .;locus=RLOC_00010801
Chr1	stalkie_big_nohaplotig	exon	123921825	123922045	99	+	.	Parent=comp158952_c1_seq1.mrna1;Target=comp158952_c1_seq1 221 1 .
Chr1	stalkie_big_nohaplotig	exon	123922561	123922889	99	+	.	Parent=comp158952_c1_seq1.mrna1;Target=comp158952_c1_seq1 550 222 .
Chr1	stalkie_big_nohaplotig	CDS	123921826	123921948	.	+	0	Parent=comp158952_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123921827	123922590	.	-	.	ID=FBgn0003941.mrna1;geneID=FBgn0003941.path1;Name=FBgn0003941;Dir=indeterminatecoverage=100.0;identity=100.0;matches=249;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010801
Chr1	stalkie_big_nohaplotig	exon	123921827	123922039	100	-	.	Parent=FBgn0003941.mrna1;Target=FBgn0003941 249 37 .
Chr1	stalkie_big_nohaplotig	exon	123922555	123922590	100	-	.	Parent=FBgn0003941.mrna1;Target=FBgn0003941 36 1 .
Chr1	stalkie_big_nohaplotig	CDS	123921827	123922039	.	-	0	Parent=FBgn0003941.mrna1;Target=FBgn0003941 249 37 .
Chr1	stalkie_big_nohaplotig	CDS	123922555	123922590	.	-	0	Parent=FBgn0003941.mrna1;Target=FBgn0003941 36 1 .
Chr1	gffcl	locus	123932706	123934834	.	-	.	ID=RLOC_00010802;geneIDs=comp163907_c1_seq1.path1;transcripts=comp163907_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123932706	123934834	.	-	.	ID=comp163907_c1_seq1.mrna1;geneID=comp163907_c1_seq1.path1;Name=comp163907_c1_seq1;Dir=antisensecoverage=99.9;identity=99.5;matches=1810;mismatches=9;indels=0;unknowns=0;locus=RLOC_00010802
Chr1	stalkie_big_nohaplotig	exon	123932706	123933098	98	-	.	Parent=comp163907_c1_seq1.mrna1;Target=comp163907_c1_seq1 2 394 -
Chr1	stalkie_big_nohaplotig	exon	123933347	123933884	99	-	.	Parent=comp163907_c1_seq1.mrna1;Target=comp163907_c1_seq1 395 932 -
Chr1	stalkie_big_nohaplotig	exon	123933947	123934834	99	-	.	Parent=comp163907_c1_seq1.mrna1;Target=comp163907_c1_seq1 933 1820 -
Chr1	stalkie_big_nohaplotig	CDS	123932852	123933098	.	-	1	Parent=comp163907_c1_seq1.mrna1;Target=comp163907_c1_seq1 148 394 .
Chr1	stalkie_big_nohaplotig	CDS	123933347	123933884	.	-	2	Parent=comp163907_c1_seq1.mrna1;Target=comp163907_c1_seq1 395 932 .
Chr1	stalkie_big_nohaplotig	CDS	123933947	123934832	.	-	0	Parent=comp163907_c1_seq1.mrna1;Target=comp163907_c1_seq1 933 1818 .
Chr1	gffcl	locus	123937635	123939719	.	-	.	ID=RLOC_00010803;geneIDs=CPIJ011293.path1;transcripts=CPIJ011293.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123937635	123939719	.	-	.	ID=CPIJ011293.mrna1;geneID=CPIJ011293.path1;Name=CPIJ011293;Dir=sensecoverage=99.8;identity=99.2;matches=588;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010803
Chr1	stalkie_big_nohaplotig	exon	123937635	123937702	100	-	.	Parent=CPIJ011293.mrna1;Target=CPIJ011293 526 593 +
Chr1	stalkie_big_nohaplotig	exon	123939028	123939244	99	-	.	Parent=CPIJ011293.mrna1;Target=CPIJ011293 309 525 +
Chr1	stalkie_big_nohaplotig	exon	123939305	123939437	98	-	.	Parent=CPIJ011293.mrna1;Target=CPIJ011293 176 308 +
Chr1	stalkie_big_nohaplotig	exon	123939492	123939645	99	-	.	Parent=CPIJ011293.mrna1;Target=CPIJ011293 22 175 +
Chr1	stalkie_big_nohaplotig	exon	123939699	123939719	100	-	.	Parent=CPIJ011293.mrna1;Target=CPIJ011293 1 21 +
Chr1	stalkie_big_nohaplotig	CDS	123937637	123937702	.	-	0	Parent=CPIJ011293.mrna1;Target=CPIJ011293 526 591 +
Chr1	stalkie_big_nohaplotig	CDS	123939028	123939244	.	-	1	Parent=CPIJ011293.mrna1;Target=CPIJ011293 309 525 +
Chr1	stalkie_big_nohaplotig	CDS	123939305	123939437	.	-	2	Parent=CPIJ011293.mrna1;Target=CPIJ011293 176 308 +
Chr1	stalkie_big_nohaplotig	CDS	123939492	123939645	.	-	0	Parent=CPIJ011293.mrna1;Target=CPIJ011293 22 175 +
Chr1	stalkie_big_nohaplotig	CDS	123939699	123939719	.	-	0	Parent=CPIJ011293.mrna1;Target=CPIJ011293 1 21 +
Chr1	gffcl	locus	123942729	123958724	.	+	.	ID=RLOC_00010804;geneIDs=FBgn0031107.1.path1;transcripts=FBgn0031107.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123942729	123958724	.	+	.	ID=FBgn0031107.1.mrna1;geneID=FBgn0031107.1.path1;Name=FBgn0031107.1;Dir=sensecoverage=100.0;identity=99.6;matches=14882;mismatches=64;indels=0;unknowns=0;locus=RLOC_00010804
Chr1	stalkie_big_nohaplotig	exon	123942729	123943727	99	+	.	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 1 999 +
Chr1	stalkie_big_nohaplotig	exon	123943791	123944718	99	+	.	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 1000 1927 +
Chr1	stalkie_big_nohaplotig	exon	123944780	123945351	99	+	.	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 1928 2499 +
Chr1	stalkie_big_nohaplotig	exon	123945430	123945984	99	+	.	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 2500 3054 +
Chr1	stalkie_big_nohaplotig	exon	123946047	123946948	99	+	.	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 3055 3956 +
Chr1	stalkie_big_nohaplotig	exon	123947025	123947178	100	+	.	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 3957 4110 +
Chr1	stalkie_big_nohaplotig	exon	123947244	123948152	99	+	.	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 4111 5019 +
Chr1	stalkie_big_nohaplotig	exon	123948221	123949293	99	+	.	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 5020 6092 +
Chr1	stalkie_big_nohaplotig	exon	123949374	123949747	100	+	.	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 6093 6466 +
Chr1	stalkie_big_nohaplotig	exon	123949811	123952698	99	+	.	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 6467 9354 +
Chr1	stalkie_big_nohaplotig	exon	123952771	123957031	99	+	.	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 9355 13615 +
Chr1	stalkie_big_nohaplotig	exon	123957091	123957616	99	+	.	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 13616 14141 +
Chr1	stalkie_big_nohaplotig	exon	123957784	123958267	99	+	.	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 14142 14625 +
Chr1	stalkie_big_nohaplotig	exon	123958329	123958505	98	+	.	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 14626 14802 +
Chr1	stalkie_big_nohaplotig	exon	123958581	123958724	100	+	.	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 14803 14946 +
Chr1	stalkie_big_nohaplotig	CDS	123942729	123943727	.	+	0	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 1 999 +
Chr1	stalkie_big_nohaplotig	CDS	123943791	123944718	.	+	0	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 1000 1927 +
Chr1	stalkie_big_nohaplotig	CDS	123944780	123945351	.	+	2	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 1928 2499 +
Chr1	stalkie_big_nohaplotig	CDS	123945430	123945984	.	+	0	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 2500 3054 +
Chr1	stalkie_big_nohaplotig	CDS	123946047	123946948	.	+	0	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 3055 3956 +
Chr1	stalkie_big_nohaplotig	CDS	123947025	123947178	.	+	1	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 3957 4110 +
Chr1	stalkie_big_nohaplotig	CDS	123947244	123948152	.	+	0	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 4111 5019 +
Chr1	stalkie_big_nohaplotig	CDS	123948221	123949293	.	+	0	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 5020 6092 +
Chr1	stalkie_big_nohaplotig	CDS	123949374	123949747	.	+	1	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 6093 6466 +
Chr1	stalkie_big_nohaplotig	CDS	123949811	123952698	.	+	2	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 6467 9354 +
Chr1	stalkie_big_nohaplotig	CDS	123952771	123957031	.	+	0	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 9355 13615 +
Chr1	stalkie_big_nohaplotig	CDS	123957091	123957616	.	+	2	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 13616 14141 +
Chr1	stalkie_big_nohaplotig	CDS	123957784	123958267	.	+	1	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 14142 14625 +
Chr1	stalkie_big_nohaplotig	CDS	123958329	123958505	.	+	0	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 14626 14802 +
Chr1	stalkie_big_nohaplotig	CDS	123958581	123958724	.	+	0	Parent=FBgn0031107.1.mrna1;Target=FBgn0031107.1 14803 14946 +
Chr1	gffcl	locus	123958980	123965464	.	+	.	ID=RLOC_00010805;geneIDs=comp134800_c0_seq1.path1;transcripts=comp134800_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123958980	123965464	.	+	.	ID=comp134800_c0_seq1.mrna1;geneID=comp134800_c0_seq1.path1;Name=comp134800_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=258;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010805
Chr1	stalkie_big_nohaplotig	exon	123958980	123959003	100	+	.	Parent=comp134800_c0_seq1.mrna1;Target=comp134800_c0_seq1 1 24 +
Chr1	stalkie_big_nohaplotig	exon	123965231	123965464	100	+	.	Parent=comp134800_c0_seq1.mrna1;Target=comp134800_c0_seq1 25 258 +
Chr1	stalkie_big_nohaplotig	CDS	123958981	123959003	.	+	0	Parent=comp134800_c0_seq1.mrna1;Target=comp134800_c0_seq1 2 24 +
Chr1	stalkie_big_nohaplotig	CDS	123965231	123965303	.	+	1	Parent=comp134800_c0_seq1.mrna1;Target=comp134800_c0_seq1 25 97 +
Chr1	gffcl	locus	123959614	123960225	.	+	.	ID=RLOC_00010806;geneIDs=comp144419_c0_seq1.path1;transcripts=comp144419_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123959614	123960225	.	+	.	ID=comp144419_c0_seq1.mrna1;geneID=comp144419_c0_seq1.path1;Name=comp144419_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.3;matches=608;mismatches=4;indels=0;unknowns=0;Target=comp144419_c0_seq1 613 2 .;CDS_Target=comp144419_c0_seq1 66 4 .;locus=RLOC_00010806
Chr1	stalkie_big_nohaplotig	exon	123959614	123960225	99	+	.	Parent=comp144419_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	123959616	123959678	.	+	0	Parent=comp144419_c0_seq1.mrna1
Chr1	gffcl	locus	123966983	123968147	.	-	.	ID=RLOC_00010807;geneIDs=ORF1413.path1;transcripts=ORF1413.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123966983	123968147	.	-	.	ID=ORF1413.mrna1;geneID=ORF1413.path1;Name=ORF1413;Dir=sensecoverage=100.0;identity=100.0;matches=1113;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010807
Chr1	stalkie_big_nohaplotig	exon	123966983	123968032	100	-	.	Parent=ORF1413.mrna1;Target=ORF1413 64 1113 +
Chr1	stalkie_big_nohaplotig	exon	123968085	123968147	100	-	.	Parent=ORF1413.mrna1;Target=ORF1413 1 63 +
Chr1	stalkie_big_nohaplotig	CDS	123966983	123968032	.	-	0	Parent=ORF1413.mrna1;Target=ORF1413 64 1113 +
Chr1	stalkie_big_nohaplotig	CDS	123968085	123968147	.	-	0	Parent=ORF1413.mrna1;Target=ORF1413 1 63 +
Chr1	gffcl	locus	123970400	123971696	.	-	.	ID=RLOC_00010808;geneIDs=comp128576_c0_seq1.path1;transcripts=comp128576_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	123970400	123971696	.	-	.	ID=comp128576_c0_seq1.mrna1;geneID=comp128576_c0_seq1.path1;Name=comp128576_c0_seq1;Dir=indeterminatecoverage=96.8;identity=99.9;matches=1225;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010808
Chr1	stalkie_big_nohaplotig	exon	123970400	123971449	99	-	.	Parent=comp128576_c0_seq1.mrna1;Target=comp128576_c0_seq1 1239 190 .
Chr1	stalkie_big_nohaplotig	exon	123971521	123971696	100	-	.	Parent=comp128576_c0_seq1.mrna1;Target=comp128576_c0_seq1 189 14 .
Chr1	stalkie_big_nohaplotig	CDS	123970877	123971449	.	-	0	Parent=comp128576_c0_seq1.mrna1;Target=comp128576_c0_seq1 762 190 .
Chr1	stalkie_big_nohaplotig	CDS	123971521	123971580	.	-	0	Parent=comp128576_c0_seq1.mrna1;Target=comp128576_c0_seq1 189 130 .
Chr1	gffcl	locus	124081853	124819774	.	-	.	ID=RLOC_00010810;geneIDs=FBgn0262735.1.path1,comp157559_c1_seq1.path1;transcripts=comp157559_c1_seq1.mrna1,FBgn0262735.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124081853	124819774	.	-	.	ID=comp157559_c1_seq1.mrna1;geneID=comp157559_c1_seq1.path1;Name=comp157559_c1_seq1;Dir=indeterminatecoverage=94.7;identity=67.8;matches=946;mismatches=153;indels=297;unknowns=0;locus=RLOC_00010810
Chr1	stalkie_big_nohaplotig	exon	124081853	124081862	80	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 2204 2195 .
Chr1	stalkie_big_nohaplotig	exon	124088760	124088768	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 2194 2186 .
Chr1	stalkie_big_nohaplotig	exon	124093071	124093076	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 2185 2180 .
Chr1	stalkie_big_nohaplotig	exon	124094779	124094789	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 2179 2169 .
Chr1	stalkie_big_nohaplotig	exon	124095465	124095476	83	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 2168 2157 .
Chr1	stalkie_big_nohaplotig	exon	124115853	124115864	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 2156 2145 .
Chr1	stalkie_big_nohaplotig	exon	124117625	124117634	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 2139 2130 .
Chr1	stalkie_big_nohaplotig	exon	124123475	124123488	85	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 2129 2116 .
Chr1	stalkie_big_nohaplotig	exon	124127537	124127544	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 2115 2108 .
Chr1	stalkie_big_nohaplotig	exon	124140636	124140646	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 2078 2068 .
Chr1	stalkie_big_nohaplotig	exon	124148303	124148385	50	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 2067 1960 .
Chr1	stalkie_big_nohaplotig	exon	124167659	124167668	90	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1949 1940 .
Chr1	stalkie_big_nohaplotig	exon	124186031	124186035	60	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1939 1935 .
Chr1	stalkie_big_nohaplotig	exon	124186516	124186538	28	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1934 1869 .
Chr1	stalkie_big_nohaplotig	exon	124192781	124192784	50	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1868 1865 .
Chr1	stalkie_big_nohaplotig	exon	124225850	124225858	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1849 1841 .
Chr1	stalkie_big_nohaplotig	exon	124225865	124225874	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1839 1830 .
Chr1	stalkie_big_nohaplotig	exon	124232520	124232521	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1829 1828 .
Chr1	stalkie_big_nohaplotig	exon	124239307	124239316	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1813 1804 .
Chr1	stalkie_big_nohaplotig	exon	124247600	124247606	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1803 1797 .
Chr1	stalkie_big_nohaplotig	exon	124250153	124250157	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1795 1791 .
Chr1	stalkie_big_nohaplotig	exon	124253103	124253115	36	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1790 1766 .
Chr1	stalkie_big_nohaplotig	exon	124259301	124259308	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1692 1685 .
Chr1	stalkie_big_nohaplotig	exon	124259344	124259352	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1653 1645 .
Chr1	stalkie_big_nohaplotig	exon	124259417	124259452	36	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1335 1270 .
Chr1	stalkie_big_nohaplotig	exon	124264270	124264274	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1269 1265 .
Chr1	stalkie_big_nohaplotig	exon	124266948	124267006	57	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1264 1196 .
Chr1	stalkie_big_nohaplotig	exon	124336668	124336678	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1195 1185 .
Chr1	stalkie_big_nohaplotig	exon	124338648	124338649	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1184 1183 .
Chr1	stalkie_big_nohaplotig	exon	124339684	124339688	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1182 1178 .
Chr1	stalkie_big_nohaplotig	exon	124339725	124339733	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1128 1120 .
Chr1	stalkie_big_nohaplotig	exon	124347189	124347191	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1119 1117 .
Chr1	stalkie_big_nohaplotig	exon	124470315	124470318	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1116 1113 .
Chr1	stalkie_big_nohaplotig	exon	124471871	124471909	45	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1112 1042 .
Chr1	stalkie_big_nohaplotig	exon	124475273	124475303	43	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 1041 984 .
Chr1	stalkie_big_nohaplotig	exon	124483420	124483448	31	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 983 926 .
Chr1	stalkie_big_nohaplotig	exon	124559509	124559518	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 799 790 .
Chr1	stalkie_big_nohaplotig	exon	124565534	124565538	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 789 785 .
Chr1	stalkie_big_nohaplotig	exon	124566605	124566609	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 784 780 .
Chr1	stalkie_big_nohaplotig	exon	124598955	124598960	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 779 774 .
Chr1	stalkie_big_nohaplotig	exon	124615185	124615192	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 773 766 .
Chr1	stalkie_big_nohaplotig	exon	124618565	124618570	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 765 760 .
Chr1	stalkie_big_nohaplotig	exon	124627144	124627151	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 745 738 .
Chr1	stalkie_big_nohaplotig	exon	124630894	124630939	53	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 737 691 .
Chr1	stalkie_big_nohaplotig	exon	124660216	124660222	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 690 684 .
Chr1	stalkie_big_nohaplotig	exon	124665121	124665123	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 683 681 .
Chr1	stalkie_big_nohaplotig	exon	124671597	124671663	51	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 677 604 .
Chr1	stalkie_big_nohaplotig	exon	124689071	124689083	84	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 603 591 .
Chr1	stalkie_big_nohaplotig	exon	124700192	124700199	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 560 553 .
Chr1	stalkie_big_nohaplotig	exon	124721108	124721115	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 551 544 .
Chr1	stalkie_big_nohaplotig	exon	124743990	124743999	90	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 543 534 .
Chr1	stalkie_big_nohaplotig	exon	124750300	124750318	32	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 533 478 .
Chr1	stalkie_big_nohaplotig	exon	124752238	124752252	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 456 442 .
Chr1	stalkie_big_nohaplotig	exon	124754194	124754198	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 441 437 .
Chr1	stalkie_big_nohaplotig	exon	124759029	124759037	23	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 413 375 .
Chr1	stalkie_big_nohaplotig	exon	124766779	124766789	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 368 358 .
Chr1	stalkie_big_nohaplotig	exon	124772118	124772119	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 357 356 .
Chr1	stalkie_big_nohaplotig	exon	124773137	124773141	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 355 351 .
Chr1	stalkie_big_nohaplotig	exon	124775830	124775834	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 350 346 .
Chr1	stalkie_big_nohaplotig	exon	124779593	124779600	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 345 338 .
Chr1	stalkie_big_nohaplotig	exon	124801448	124801453	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 336 331 .
Chr1	stalkie_big_nohaplotig	exon	124801977	124801979	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 330 328 .
Chr1	stalkie_big_nohaplotig	exon	124818821	124818827	100	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 267 261 .
Chr1	stalkie_big_nohaplotig	exon	124819516	124819774	97	-	.	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 260 2 .
Chr1	stalkie_big_nohaplotig	CDS	124818821	124818827	.	-	1	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 267 261 .
Chr1	stalkie_big_nohaplotig	CDS	124819516	124819703	.	-	0	Parent=comp157559_c1_seq1.mrna1;Target=comp157559_c1_seq1 260 73 .
Chr1	stalkie_big_nohaplotig	mRNA	124556384	124564407	.	-	.	ID=FBgn0262735.1.mrna1;geneID=FBgn0262735.1.path1;Name=FBgn0262735.1;Dir=sensecoverage=100.0;identity=100.0;matches=1728;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010810
Chr1	stalkie_big_nohaplotig	exon	124556384	124556605	100	-	.	Parent=FBgn0262735.1.mrna1;Target=FBgn0262735.1 1507 1728 +
Chr1	stalkie_big_nohaplotig	exon	124556707	124556862	100	-	.	Parent=FBgn0262735.1.mrna1;Target=FBgn0262735.1 1351 1506 +
Chr1	stalkie_big_nohaplotig	exon	124556942	124557650	100	-	.	Parent=FBgn0262735.1.mrna1;Target=FBgn0262735.1 642 1350 +
Chr1	stalkie_big_nohaplotig	exon	124559475	124559849	100	-	.	Parent=FBgn0262735.1.mrna1;Target=FBgn0262735.1 267 641 +
Chr1	stalkie_big_nohaplotig	exon	124562497	124562670	100	-	.	Parent=FBgn0262735.1.mrna1;Target=FBgn0262735.1 93 266 +
Chr1	stalkie_big_nohaplotig	exon	124564316	124564407	100	-	.	Parent=FBgn0262735.1.mrna1;Target=FBgn0262735.1 1 92 +
Chr1	stalkie_big_nohaplotig	CDS	124556384	124556605	.	-	0	Parent=FBgn0262735.1.mrna1;Target=FBgn0262735.1 1507 1728 +
Chr1	stalkie_big_nohaplotig	CDS	124556707	124556862	.	-	0	Parent=FBgn0262735.1.mrna1;Target=FBgn0262735.1 1351 1506 +
Chr1	stalkie_big_nohaplotig	CDS	124556942	124557650	.	-	1	Parent=FBgn0262735.1.mrna1;Target=FBgn0262735.1 642 1350 +
Chr1	stalkie_big_nohaplotig	CDS	124559475	124559849	.	-	1	Parent=FBgn0262735.1.mrna1;Target=FBgn0262735.1 267 641 +
Chr1	stalkie_big_nohaplotig	CDS	124562497	124562670	.	-	1	Parent=FBgn0262735.1.mrna1;Target=FBgn0262735.1 93 266 +
Chr1	stalkie_big_nohaplotig	CDS	124564316	124564407	.	-	0	Parent=FBgn0262735.1.mrna1;Target=FBgn0262735.1 1 92 +
Chr1	gffcl	locus	124219302	124226078	.	+	.	ID=RLOC_00010811;geneIDs=FBgn0052529.1.path1;transcripts=FBgn0052529.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124219302	124226078	.	+	.	ID=FBgn0052529.1.mrna1;geneID=FBgn0052529.1.path1;Name=FBgn0052529.1;Dir=sensecoverage=98.5;identity=99.7;matches=4645;mismatches=16;indels=0;unknowns=0;locus=RLOC_00010811
Chr1	stalkie_big_nohaplotig	exon	124219302	124219660	99	+	.	Parent=FBgn0052529.1.mrna1;Target=FBgn0052529.1 74 432 +
Chr1	stalkie_big_nohaplotig	exon	124219730	124220183	99	+	.	Parent=FBgn0052529.1.mrna1;Target=FBgn0052529.1 433 886 +
Chr1	stalkie_big_nohaplotig	exon	124220432	124221817	99	+	.	Parent=FBgn0052529.1.mrna1;Target=FBgn0052529.1 887 2272 +
Chr1	stalkie_big_nohaplotig	exon	124221896	124223826	99	+	.	Parent=FBgn0052529.1.mrna1;Target=FBgn0052529.1 2273 4203 +
Chr1	stalkie_big_nohaplotig	exon	124223889	124224048	100	+	.	Parent=FBgn0052529.1.mrna1;Target=FBgn0052529.1 4204 4363 +
Chr1	stalkie_big_nohaplotig	exon	124224111	124224279	99	+	.	Parent=FBgn0052529.1.mrna1;Target=FBgn0052529.1 4364 4532 +
Chr1	stalkie_big_nohaplotig	exon	124225877	124226078	100	+	.	Parent=FBgn0052529.1.mrna1;Target=FBgn0052529.1 4533 4734 +
Chr1	stalkie_big_nohaplotig	CDS	124219304	124219660	.	+	0	Parent=FBgn0052529.1.mrna1;Target=FBgn0052529.1 76 432 +
Chr1	stalkie_big_nohaplotig	CDS	124219730	124220183	.	+	0	Parent=FBgn0052529.1.mrna1;Target=FBgn0052529.1 433 886 +
Chr1	stalkie_big_nohaplotig	CDS	124220432	124221817	.	+	2	Parent=FBgn0052529.1.mrna1;Target=FBgn0052529.1 887 2272 +
Chr1	stalkie_big_nohaplotig	CDS	124221896	124223826	.	+	2	Parent=FBgn0052529.1.mrna1;Target=FBgn0052529.1 2273 4203 +
Chr1	stalkie_big_nohaplotig	CDS	124223889	124224048	.	+	0	Parent=FBgn0052529.1.mrna1;Target=FBgn0052529.1 4204 4363 +
Chr1	stalkie_big_nohaplotig	CDS	124224111	124224279	.	+	2	Parent=FBgn0052529.1.mrna1;Target=FBgn0052529.1 4364 4532 +
Chr1	stalkie_big_nohaplotig	CDS	124225877	124226078	.	+	1	Parent=FBgn0052529.1.mrna1;Target=FBgn0052529.1 4533 4734 +
Chr1	gffcl	locus	124228076	124229198	.	+	.	ID=RLOC_00010812;geneIDs=comp162553_c0_seq1.path1;transcripts=comp162553_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124228076	124229198	.	+	.	ID=comp162553_c0_seq1.mrna1;geneID=comp162553_c0_seq1.path1;Name=comp162553_c0_seq1;Dir=indeterminatecoverage=97.6;identity=93.4;matches=1049;mismatches=40;indels=34;unknowns=0;Target=comp162553_c0_seq1 1089 1 .;CDS_Target=comp162553_c0_seq1 516 367 .;locus=RLOC_00010812
Chr1	stalkie_big_nohaplotig	exon	124228076	124229198	93	+	.	Parent=comp162553_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124228476	124228625	.	+	0	Parent=comp162553_c0_seq1.mrna1
Chr1	gffcl	locus	124229630	124230296	.	-	.	ID=RLOC_00010813;geneIDs=comp151594_c0_seq1.path1;transcripts=comp151594_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124229630	124230296	.	-	.	ID=comp151594_c0_seq1.mrna1;geneID=comp151594_c0_seq1.path1;Name=comp151594_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.0;matches=661;mismatches=6;indels=1;unknowns=0;Target=comp151594_c0_seq1 668 1 .;CDS_Target=comp151594_c0_seq1 226 161 .;locus=RLOC_00010813
Chr1	stalkie_big_nohaplotig	exon	124229630	124230296	98	-	.	Parent=comp151594_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124230071	124230136	.	-	0	Parent=comp151594_c0_seq1.mrna1
Chr1	gffcl	locus	124230584	124230826	.	+	.	ID=RLOC_00010814;geneIDs=comp1151056_c0_seq1.path1;transcripts=comp1151056_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124230584	124230826	.	+	.	ID=comp1151056_c0_seq1.mrna1;geneID=comp1151056_c0_seq1.path1;Name=comp1151056_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=243;mismatches=0;indels=0;unknowns=0;Target=comp1151056_c0_seq1 243 1 .;CDS_Target=comp1151056_c0_seq1 216 145 .;locus=RLOC_00010814
Chr1	stalkie_big_nohaplotig	exon	124230584	124230826	100	+	.	Parent=comp1151056_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124230728	124230799	.	+	0	Parent=comp1151056_c0_seq1.mrna1
Chr1	gffcl	locus	124245261	124245578	.	+	.	ID=RLOC_00010815;geneIDs=comp142906_c1_seq1.path1;transcripts=comp142906_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124245261	124245578	.	+	.	ID=comp142906_c1_seq1.mrna1;geneID=comp142906_c1_seq1.path1;Name=comp142906_c1_seq1;Dir=indeterminatecoverage=94.4;identity=99.1;matches=315;mismatches=3;indels=0;unknowns=0;Target=comp142906_c1_seq1 337 20 .;CDS_Target=comp142906_c1_seq1 104 21 .;locus=RLOC_00010815
Chr1	stalkie_big_nohaplotig	exon	124245261	124245578	99	+	.	Parent=comp142906_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124245262	124245345	.	+	0	Parent=comp142906_c1_seq1.mrna1
Chr1	gffcl	locus	124281466	124282082	.	-	.	ID=RLOC_00010816;geneIDs=comp146556_c0_seq1.path1;transcripts=comp146556_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124281466	124282082	.	-	.	ID=comp146556_c0_seq1.mrna1;geneID=comp146556_c0_seq1.path1;Name=comp146556_c0_seq1;Dir=indeterminatecoverage=96.9;identity=99.5;matches=614;mismatches=3;indels=0;unknowns=0;Target=comp146556_c0_seq1 637 21 .;CDS_Target=comp146556_c0_seq1 635 552 .;locus=RLOC_00010816
Chr1	stalkie_big_nohaplotig	exon	124281466	124282082	99	-	.	Parent=comp146556_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124281468	124281551	.	-	0	Parent=comp146556_c0_seq1.mrna1
Chr1	gffcl	locus	124328861	124394024	.	-	.	ID=RLOC_00010817;geneIDs=comp155316_c0_seq1.path1;transcripts=comp155316_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124328861	124394024	.	-	.	ID=comp155316_c0_seq1.mrna1;geneID=comp155316_c0_seq1.path1;Name=comp155316_c0_seq1;Dir=sensecoverage=100.0;identity=98.6;matches=944;mismatches=11;indels=2;unknowns=0;Target=comp155316_c0_seq1 209 289 +;locus=RLOC_00010817
Chr1	stalkie_big_nohaplotig	exon	124328861	124329142	100	-	.	Parent=comp155316_c0_seq1.mrna1;Target=comp155316_c0_seq1 676 957 +
Chr1	stalkie_big_nohaplotig	exon	124393352	124394024	98	-	.	Parent=comp155316_c0_seq1.mrna1;Target=comp155316_c0_seq1 1 675 +
Chr1	stalkie_big_nohaplotig	CDS	124393736	124393816	.	-	0	Parent=comp155316_c0_seq1.mrna1
Chr1	gffcl	locus	124363437	124364574	.	-	.	ID=RLOC_00010818;geneIDs=comp159919_c0_seq1.path1;transcripts=comp159919_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124363437	124364574	.	-	.	ID=comp159919_c0_seq1.mrna1;geneID=comp159919_c0_seq1.path1;Name=comp159919_c0_seq1;Dir=indeterminatecoverage=96.0;identity=93.9;matches=1071;mismatches=40;indels=30;unknowns=0;Target=comp159919_c0_seq1 1116 3 .;CDS_Target=comp159919_c0_seq1 587 483 .;locus=RLOC_00010818
Chr1	stalkie_big_nohaplotig	exon	124363437	124364574	93	-	.	Parent=comp159919_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124363972	124364076	.	-	0	Parent=comp159919_c0_seq1.mrna1
Chr1	gffcl	locus	124365146	124365438	.	+	.	ID=RLOC_00010819;geneIDs=comp148383_c0_seq1.path1;transcripts=comp148383_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124365146	124365438	.	+	.	ID=comp148383_c0_seq1.mrna1;geneID=comp148383_c0_seq1.path1;Name=comp148383_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=293;mismatches=0;indels=0;unknowns=0;Target=comp148383_c0_seq1 293 1 .;CDS_Target=comp148383_c0_seq1 225 118 .;locus=RLOC_00010819
Chr1	stalkie_big_nohaplotig	exon	124365146	124365438	100	+	.	Parent=comp148383_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124365263	124365370	.	+	0	Parent=comp148383_c0_seq1.mrna1
Chr1	gffcl	locus	124368063	124368323	.	-	.	ID=RLOC_00010820;geneIDs=comp389438_c0_seq1.path1;transcripts=comp389438_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124368063	124368323	.	-	.	ID=comp389438_c0_seq1.mrna1;geneID=comp389438_c0_seq1.path1;Name=comp389438_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=261;mismatches=0;indels=0;unknowns=0;Target=comp389438_c0_seq1 261 1 .;CDS_Target=comp389438_c0_seq1 89 3 .;locus=RLOC_00010820
Chr1	stalkie_big_nohaplotig	exon	124368063	124368323	100	-	.	Parent=comp389438_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124368235	124368321	.	-	0	Parent=comp389438_c0_seq1.mrna1
Chr1	gffcl	locus	124368528	124368903	.	.	.	ID=RLOC_00010821;geneIDs=comp47267_c0_seq1.path1,comp60946_c0_seq1.path1;transcripts=comp60946_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124368528	124368730	.	+	.	ID=comp60946_c0_seq1.mrna1;geneID=comp60946_c0_seq1.path1;Name=comp60946_c0_seq1;Dir=indeterminatecoverage=95.8;identity=100.0;matches=203;mismatches=0;indels=0;unknowns=0;Target=comp60946_c0_seq1 203 1 .;CDS_Target=comp60946_c0_seq1 79 2 .;locus=RLOC_00010821
Chr1	stalkie_big_nohaplotig	exon	124368528	124368730	100	+	.	Parent=comp60946_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124368529	124368606	.	+	0	Parent=comp60946_c0_seq1.mrna1
Chr1	gffcl	locus	124370545	124371381	.	-	.	ID=RLOC_00010822;geneIDs=FBgn0026373.2.path1;transcripts=FBgn0026373.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124370545	124371381	.	-	.	ID=FBgn0026373.2.mrna1;geneID=FBgn0026373.2.path1;Name=FBgn0026373.2;Dir=indeterminatecoverage=100.0;identity=98.3;matches=823;mismatches=14;indels=0;unknowns=0;Target=FBgn0026373.2 837 1 .;locus=RLOC_00010822
Chr1	stalkie_big_nohaplotig	exon	124370545	124371381	98	-	.	Parent=FBgn0026373.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124370545	124371381	.	-	0	Parent=FBgn0026373.2.mrna1
Chr1	gffcl	locus	124374333	124388126	.	-	.	ID=RLOC_00010823;geneIDs=FBgn0052687.1.path1;transcripts=FBgn0052687.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124374333	124388126	.	-	.	ID=FBgn0052687.1.mrna1;geneID=FBgn0052687.1.path1;Name=FBgn0052687.1;Dir=sensecoverage=100.0;identity=99.6;matches=1127;mismatches=4;indels=1;unknowns=0;Target=FBgn0052687.1 2 22 +;locus=RLOC_00010823
Chr1	stalkie_big_nohaplotig	exon	124374333	124374683	99	-	.	Parent=FBgn0052687.1.mrna1;Target=FBgn0052687.1 781 1131 +
Chr1	stalkie_big_nohaplotig	exon	124374751	124374967	100	-	.	Parent=FBgn0052687.1.mrna1;Target=FBgn0052687.1 564 780 +
Chr1	stalkie_big_nohaplotig	exon	124387563	124388126	99	-	.	Parent=FBgn0052687.1.mrna1;Target=FBgn0052687.1 1 563 +
Chr1	stalkie_big_nohaplotig	CDS	124388105	124388125	.	-	0	Parent=FBgn0052687.1.mrna1
Chr1	gffcl	locus	124396276	124399056	.	+	.	ID=RLOC_00010824;geneIDs=comp162958_c2_seq1.path1;transcripts=comp162958_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124396276	124399056	.	+	.	ID=comp162958_c2_seq1.mrna1;geneID=comp162958_c2_seq1.path1;Name=comp162958_c2_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=2493;mismatches=22;indels=0;unknowns=0;locus=RLOC_00010824
Chr1	stalkie_big_nohaplotig	exon	124396276	124397293	99	+	.	Parent=comp162958_c2_seq1.mrna1;Target=comp162958_c2_seq1 1498 2515 -
Chr1	stalkie_big_nohaplotig	exon	124397359	124397421	98	+	.	Parent=comp162958_c2_seq1.mrna1;Target=comp162958_c2_seq1 1435 1497 -
Chr1	stalkie_big_nohaplotig	exon	124397623	124399056	99	+	.	Parent=comp162958_c2_seq1.mrna1;Target=comp162958_c2_seq1 1 1434 -
Chr1	stalkie_big_nohaplotig	CDS	124396276	124397293	.	+	0	Parent=comp162958_c2_seq1.mrna1;Target=comp162958_c2_seq1 1498 2515 .
Chr1	stalkie_big_nohaplotig	CDS	124397359	124397421	.	+	2	Parent=comp162958_c2_seq1.mrna1;Target=comp162958_c2_seq1 1435 1497 .
Chr1	stalkie_big_nohaplotig	CDS	124397623	124398578	.	+	2	Parent=comp162958_c2_seq1.mrna1;Target=comp162958_c2_seq1 479 1434 .
Chr1	gffcl	locus	124401635	126147299	.	+	.	ID=RLOC_00010825;geneIDs=comp147681_c0_seq1.path1,comp151860_c0_seq1.path1,comp162600_c0_seq1.path1;transcripts=comp151860_c0_seq1.mrna1,comp162600_c0_seq1.mrna1,comp147681_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124401635	126147299	.	+	.	ID=comp151860_c0_seq1.mrna1;geneID=comp151860_c0_seq1.path1;Name=comp151860_c0_seq1;Dir=indeterminatecoverage=93.1;identity=99.2;matches=719;mismatches=5;indels=1;unknowns=0;Target=comp151860_c0_seq1 531 409 .;locus=RLOC_00010825
Chr1	stalkie_big_nohaplotig	exon	124401635	124402321	99	+	.	Parent=comp151860_c0_seq1.mrna1;Target=comp151860_c0_seq1 713 26 .
Chr1	stalkie_big_nohaplotig	exon	126098931	126098933	100	+	.	Parent=comp151860_c0_seq1.mrna1;Target=comp151860_c0_seq1 716 714 .
Chr1	stalkie_big_nohaplotig	exon	126105199	126105210	100	+	.	Parent=comp151860_c0_seq1.mrna1;Target=comp151860_c0_seq1 728 717 .
Chr1	stalkie_big_nohaplotig	exon	126109724	126109729	100	+	.	Parent=comp151860_c0_seq1.mrna1;Target=comp151860_c0_seq1 734 729 .
Chr1	stalkie_big_nohaplotig	exon	126123714	126123720	100	+	.	Parent=comp151860_c0_seq1.mrna1;Target=comp151860_c0_seq1 741 735 .
Chr1	stalkie_big_nohaplotig	exon	126131030	126131031	100	+	.	Parent=comp151860_c0_seq1.mrna1;Target=comp151860_c0_seq1 743 742 .
Chr1	stalkie_big_nohaplotig	exon	126147293	126147299	100	+	.	Parent=comp151860_c0_seq1.mrna1;Target=comp151860_c0_seq1 750 744 .
Chr1	stalkie_big_nohaplotig	CDS	124402018	124402140	.	+	0	Parent=comp151860_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124402320	124403469	.	+	.	ID=comp162600_c0_seq1.mrna1;geneID=comp162600_c0_seq1.path1;Name=comp162600_c0_seq1;Dir=indeterminatecoverage=83.4;identity=96.3;matches=1110;mismatches=20;indels=23;unknowns=0;Target=comp162600_c0_seq1 1358 226 .;CDS_Target=comp162600_c0_seq1 701 582 .;locus=RLOC_00010825
Chr1	stalkie_big_nohaplotig	exon	124402320	124403469	96	+	.	Parent=comp162600_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124402676	124402795	.	+	0	Parent=comp162600_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126102236	126105476	.	+	.	ID=comp147681_c0_seq1.mrna1;geneID=comp147681_c0_seq1.path1;Name=comp147681_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=1234;mismatches=7;indels=1;unknowns=0;locus=RLOC_00010825
Chr1	stalkie_big_nohaplotig	exon	126102236	126102521	99	+	.	Parent=comp147681_c0_seq1.mrna1;Target=comp147681_c0_seq1 956 1242 -
Chr1	stalkie_big_nohaplotig	exon	126104522	126105476	99	+	.	Parent=comp147681_c0_seq1.mrna1;Target=comp147681_c0_seq1 1 955 -
Chr1	stalkie_big_nohaplotig	CDS	126102453	126102521	.	+	0	Parent=comp147681_c0_seq1.mrna1;Target=comp147681_c0_seq1 956 1024 .
Chr1	stalkie_big_nohaplotig	CDS	126104522	126104632	.	+	0	Parent=comp147681_c0_seq1.mrna1;Target=comp147681_c0_seq1 845 955 .
Chr1	gffcl	locus	124408964	124409405	.	-	.	ID=RLOC_00010827;geneIDs=comp153472_c0_seq1.path1;transcripts=comp153472_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124408964	124409405	.	-	.	ID=comp153472_c0_seq1.mrna1;geneID=comp153472_c0_seq1.path1;Name=comp153472_c0_seq1;Dir=antisensecoverage=100.0;identity=94.1;matches=364;mismatches=10;indels=13;unknowns=0;locus=RLOC_00010827
Chr1	stalkie_big_nohaplotig	exon	124408964	124409232	96	-	.	Parent=comp153472_c0_seq1.mrna1;Target=comp153472_c0_seq1 1 273 -
Chr1	stalkie_big_nohaplotig	exon	124409292	124409405	88	-	.	Parent=comp153472_c0_seq1.mrna1;Target=comp153472_c0_seq1 274 378 -
Chr1	stalkie_big_nohaplotig	CDS	124409152	124409232	.	-	0	Parent=comp153472_c0_seq1.mrna1;Target=comp153472_c0_seq1 193 273 .
Chr1	stalkie_big_nohaplotig	CDS	124409292	124409405	.	-	0	Parent=comp153472_c0_seq1.mrna1;Target=comp153472_c0_seq1 274 378 .
Chr1	gffcl	locus	124409428	124409764	.	+	.	ID=RLOC_00010828;geneIDs=comp141503_c0_seq1.path1;transcripts=comp141503_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124409428	124409764	.	+	.	ID=comp141503_c0_seq1.mrna1;geneID=comp141503_c0_seq1.path1;Name=comp141503_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=336;mismatches=1;indels=0;unknowns=0;Target=comp141503_c0_seq1 337 1 .;CDS_Target=comp141503_c0_seq1 322 131 .;locus=RLOC_00010828
Chr1	stalkie_big_nohaplotig	exon	124409428	124409764	99	+	.	Parent=comp141503_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124409558	124409749	.	+	0	Parent=comp141503_c0_seq1.mrna1
Chr1	gffcl	locus	124410677	124411376	.	-	.	ID=RLOC_00010829;geneIDs=comp150415_c0_seq1.path1;transcripts=comp150415_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124410677	124411376	.	-	.	ID=comp150415_c0_seq1.mrna1;geneID=comp150415_c0_seq1.path1;Name=comp150415_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.0;matches=681;mismatches=18;indels=3;unknowns=0;Target=comp150415_c0_seq1 701 1 .;CDS_Target=comp150415_c0_seq1 184 86 .;locus=RLOC_00010829
Chr1	stalkie_big_nohaplotig	exon	124410677	124411376	97	-	.	Parent=comp150415_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124411194	124411291	.	-	0	Parent=comp150415_c0_seq1.mrna1
Chr1	gffcl	locus	124412367	124412886	.	+	.	ID=RLOC_00010830;geneIDs=comp157803_c0_seq1.path1;transcripts=comp157803_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124412367	124412886	.	+	.	ID=comp157803_c0_seq1.mrna1;geneID=comp157803_c0_seq1.path1;Name=comp157803_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=508;mismatches=8;indels=4;unknowns=0;Target=comp157803_c0_seq1 516 1 .;CDS_Target=comp157803_c0_seq1 443 327 .;locus=RLOC_00010830
Chr1	stalkie_big_nohaplotig	exon	124412367	124412886	97	+	.	Parent=comp157803_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124412695	124412811	.	+	0	Parent=comp157803_c0_seq1.mrna1
Chr1	gffcl	locus	124413671	124413973	.	+	.	ID=RLOC_00010831;geneIDs=comp149242_c0_seq1.path1;transcripts=comp149242_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124413671	124413973	.	+	.	ID=comp149242_c0_seq1.mrna1;geneID=comp149242_c0_seq1.path1;Name=comp149242_c0_seq1;Dir=indeterminatecoverage=96.0;identity=93.7;matches=284;mismatches=4;indels=15;unknowns=0;Target=comp149242_c0_seq1 291 4 .;CDS_Target=comp149242_c0_seq1 149 75 .;locus=RLOC_00010831
Chr1	stalkie_big_nohaplotig	exon	124413671	124413973	93	+	.	Parent=comp149242_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124413742	124413831	.	+	0	Parent=comp149242_c0_seq1.mrna1
Chr1	gffcl	locus	124414005	124414533	.	+	.	ID=RLOC_00010832;geneIDs=comp158739_c0_seq1.path1;transcripts=comp158739_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124414005	124414533	.	+	.	ID=comp158739_c0_seq1.mrna1;geneID=comp158739_c0_seq1.path1;Name=comp158739_c0_seq1;Dir=indeterminatecoverage=93.2;identity=89.4;matches=504;mismatches=19;indels=41;unknowns=0;Target=comp158739_c0_seq1 558 1 .;CDS_Target=comp158739_c0_seq1 298 140 .;locus=RLOC_00010832
Chr1	stalkie_big_nohaplotig	exon	124414005	124414533	89	+	.	Parent=comp158739_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124414142	124414273	.	+	0	Parent=comp158739_c0_seq1.mrna1
Chr1	gffcl	locus	124415332	124415932	.	-	.	ID=RLOC_00010833;geneIDs=FBgn0023534.1.path1;transcripts=FBgn0023534.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124415332	124415932	.	-	.	ID=FBgn0023534.1.mrna1;geneID=FBgn0023534.1.path1;Name=FBgn0023534.1;Dir=sensecoverage=100.0;identity=100.0;matches=345;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010833
Chr1	stalkie_big_nohaplotig	exon	124415332	124415616	100	-	.	Parent=FBgn0023534.1.mrna1;Target=FBgn0023534.1 61 345 +
Chr1	stalkie_big_nohaplotig	exon	124415873	124415932	100	-	.	Parent=FBgn0023534.1.mrna1;Target=FBgn0023534.1 1 60 +
Chr1	stalkie_big_nohaplotig	CDS	124415332	124415616	.	-	0	Parent=FBgn0023534.1.mrna1;Target=FBgn0023534.1 61 345 +
Chr1	stalkie_big_nohaplotig	CDS	124415873	124415932	.	-	0	Parent=FBgn0023534.1.mrna1;Target=FBgn0023534.1 1 60 +
Chr1	gffcl	locus	124419474	124421391	.	-	.	ID=RLOC_00010834;geneIDs=FBgn0030668.1.path1;transcripts=FBgn0030668.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124419474	124421391	.	-	.	ID=FBgn0030668.1.mrna1;geneID=FBgn0030668.1.path1;Name=FBgn0030668.1;Dir=sensecoverage=100.0;identity=99.9;matches=1088;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010834
Chr1	stalkie_big_nohaplotig	exon	124419474	124419853	100	-	.	Parent=FBgn0030668.1.mrna1;Target=FBgn0030668.1 710 1089 +
Chr1	stalkie_big_nohaplotig	exon	124419919	124420132	100	-	.	Parent=FBgn0030668.1.mrna1;Target=FBgn0030668.1 496 709 +
Chr1	stalkie_big_nohaplotig	exon	124420764	124420855	100	-	.	Parent=FBgn0030668.1.mrna1;Target=FBgn0030668.1 404 495 +
Chr1	stalkie_big_nohaplotig	exon	124420912	124421039	100	-	.	Parent=FBgn0030668.1.mrna1;Target=FBgn0030668.1 276 403 +
Chr1	stalkie_big_nohaplotig	exon	124421117	124421391	99	-	.	Parent=FBgn0030668.1.mrna1;Target=FBgn0030668.1 1 275 +
Chr1	stalkie_big_nohaplotig	CDS	124419474	124419853	.	-	2	Parent=FBgn0030668.1.mrna1;Target=FBgn0030668.1 710 1089 +
Chr1	stalkie_big_nohaplotig	CDS	124419919	124420132	.	-	0	Parent=FBgn0030668.1.mrna1;Target=FBgn0030668.1 496 709 +
Chr1	stalkie_big_nohaplotig	CDS	124420764	124420855	.	-	2	Parent=FBgn0030668.1.mrna1;Target=FBgn0030668.1 404 495 +
Chr1	stalkie_big_nohaplotig	CDS	124420912	124421039	.	-	1	Parent=FBgn0030668.1.mrna1;Target=FBgn0030668.1 276 403 +
Chr1	stalkie_big_nohaplotig	CDS	124421117	124421391	.	-	0	Parent=FBgn0030668.1.mrna1;Target=FBgn0030668.1 1 275 +
Chr1	gffcl	locus	124423421	124424920	.	-	.	ID=RLOC_00010835;geneIDs=FBgn0016038.1.path1,comp117305_c0_seq1.path1;transcripts=FBgn0016038.1.mrna1,comp117305_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124423421	124424920	.	-	.	ID=FBgn0016038.1.mrna1;geneID=FBgn0016038.1.path1;Name=FBgn0016038.1;Dir=sensecoverage=100.0;identity=99.9;matches=992;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010835
Chr1	stalkie_big_nohaplotig	exon	124423421	124423612	99	-	.	Parent=FBgn0016038.1.mrna1;Target=FBgn0016038.1 802 993 +
Chr1	stalkie_big_nohaplotig	exon	124423675	124423826	100	-	.	Parent=FBgn0016038.1.mrna1;Target=FBgn0016038.1 650 801 +
Chr1	stalkie_big_nohaplotig	exon	124423883	124424252	100	-	.	Parent=FBgn0016038.1.mrna1;Target=FBgn0016038.1 280 649 +
Chr1	stalkie_big_nohaplotig	exon	124424579	124424771	100	-	.	Parent=FBgn0016038.1.mrna1;Target=FBgn0016038.1 87 279 +
Chr1	stalkie_big_nohaplotig	exon	124424835	124424920	100	-	.	Parent=FBgn0016038.1.mrna1;Target=FBgn0016038.1 1 86 +
Chr1	stalkie_big_nohaplotig	CDS	124423421	124423612	.	-	0	Parent=FBgn0016038.1.mrna1;Target=FBgn0016038.1 802 993 +
Chr1	stalkie_big_nohaplotig	CDS	124423675	124423826	.	-	2	Parent=FBgn0016038.1.mrna1;Target=FBgn0016038.1 650 801 +
Chr1	stalkie_big_nohaplotig	CDS	124423883	124424252	.	-	0	Parent=FBgn0016038.1.mrna1;Target=FBgn0016038.1 280 649 +
Chr1	stalkie_big_nohaplotig	CDS	124424579	124424771	.	-	1	Parent=FBgn0016038.1.mrna1;Target=FBgn0016038.1 87 279 +
Chr1	stalkie_big_nohaplotig	CDS	124424835	124424920	.	-	0	Parent=FBgn0016038.1.mrna1;Target=FBgn0016038.1 1 86 +
Chr1	stalkie_big_nohaplotig	mRNA	124424229	124424601	.	-	.	ID=comp117305_c0_seq1.mrna1;geneID=comp117305_c0_seq1.path1;Name=comp117305_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=318;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010835
Chr1	stalkie_big_nohaplotig	exon	124424229	124424525	99	-	.	Parent=comp117305_c0_seq1.mrna1;Target=comp117305_c0_seq1 1 297 -
Chr1	stalkie_big_nohaplotig	exon	124424579	124424601	100	-	.	Parent=comp117305_c0_seq1.mrna1;Target=comp117305_c0_seq1 298 320 -
Chr1	stalkie_big_nohaplotig	CDS	124424320	124424525	.	-	2	Parent=comp117305_c0_seq1.mrna1;Target=comp117305_c0_seq1 92 297 .
Chr1	stalkie_big_nohaplotig	CDS	124424579	124424600	.	-	0	Parent=comp117305_c0_seq1.mrna1;Target=comp117305_c0_seq1 298 319 .
Chr1	gffcl	locus	124425286	124425854	.	+	.	ID=RLOC_00010836;geneIDs=FBgn0029529.1.path1;transcripts=FBgn0029529.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124425286	124425854	.	+	.	ID=FBgn0029529.1.mrna1;geneID=FBgn0029529.1.path1;Name=FBgn0029529.1;Dir=sensecoverage=100.0;identity=99.8;matches=509;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010836
Chr1	stalkie_big_nohaplotig	exon	124425286	124425501	100	+	.	Parent=FBgn0029529.1.mrna1;Target=FBgn0029529.1 1 216 +
Chr1	stalkie_big_nohaplotig	exon	124425561	124425854	99	+	.	Parent=FBgn0029529.1.mrna1;Target=FBgn0029529.1 217 510 +
Chr1	stalkie_big_nohaplotig	CDS	124425286	124425501	.	+	0	Parent=FBgn0029529.1.mrna1;Target=FBgn0029529.1 1 216 +
Chr1	stalkie_big_nohaplotig	CDS	124425561	124425854	.	+	0	Parent=FBgn0029529.1.mrna1;Target=FBgn0029529.1 217 510 +
Chr1	gffcl	locus	124426263	124429316	.	+	.	ID=RLOC_00010837;geneIDs=FBgn0031091.1.path1;transcripts=FBgn0031091.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124426263	124429316	.	+	.	ID=FBgn0031091.1.mrna1;geneID=FBgn0031091.1.path1;Name=FBgn0031091.1;Dir=sensecoverage=100.0;identity=99.9;matches=2843;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010837
Chr1	stalkie_big_nohaplotig	exon	124426263	124426394	100	+	.	Parent=FBgn0031091.1.mrna1;Target=FBgn0031091.1 1 132 +
Chr1	stalkie_big_nohaplotig	exon	124426465	124426964	100	+	.	Parent=FBgn0031091.1.mrna1;Target=FBgn0031091.1 133 632 +
Chr1	stalkie_big_nohaplotig	exon	124427020	124427983	99	+	.	Parent=FBgn0031091.1.mrna1;Target=FBgn0031091.1 633 1596 +
Chr1	stalkie_big_nohaplotig	exon	124428066	124429316	99	+	.	Parent=FBgn0031091.1.mrna1;Target=FBgn0031091.1 1597 2847 +
Chr1	stalkie_big_nohaplotig	CDS	124426263	124426394	.	+	0	Parent=FBgn0031091.1.mrna1;Target=FBgn0031091.1 1 132 +
Chr1	stalkie_big_nohaplotig	CDS	124426465	124426964	.	+	0	Parent=FBgn0031091.1.mrna1;Target=FBgn0031091.1 133 632 +
Chr1	stalkie_big_nohaplotig	CDS	124427020	124427983	.	+	1	Parent=FBgn0031091.1.mrna1;Target=FBgn0031091.1 633 1596 +
Chr1	stalkie_big_nohaplotig	CDS	124428066	124429316	.	+	0	Parent=FBgn0031091.1.mrna1;Target=FBgn0031091.1 1597 2847 +
Chr1	gffcl	locus	124442545	124567952	.	.	.	ID=RLOC_00010838;geneIDs=FBgn0016034.3.path1,comp150617_c0_seq1.path1,comp159884_c1_seq1.path2,comp161188_c2_seq1.path1;transcripts=comp159884_c1_seq1.mrna2,FBgn0016034.3.mrna1,comp161188_c2_seq1.mrna1,comp150617_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124442545	124567952	.	+	.	ID=comp159884_c1_seq1.mrna2;geneID=comp159884_c1_seq1.path2;Name=comp159884_c1_seq1;Dir=indeterminatecoverage=83.0;identity=95.4;matches=1553;mismatches=25;indels=50;unknowns=0;Target=comp159884_c1_seq1 1290 1030 .;locus=RLOC_00010838
Chr1	stalkie_big_nohaplotig	exon	124442545	124442550	100	+	.	Parent=comp159884_c1_seq1.mrna2;Target=comp159884_c1_seq1 356 351 .
Chr1	stalkie_big_nohaplotig	exon	124447337	124447361	65	+	.	Parent=comp159884_c1_seq1.mrna2;Target=comp159884_c1_seq1 388 357 .
Chr1	stalkie_big_nohaplotig	exon	124448629	124448633	100	+	.	Parent=comp159884_c1_seq1.mrna2;Target=comp159884_c1_seq1 393 389 .
Chr1	stalkie_big_nohaplotig	exon	124461318	124461328	100	+	.	Parent=comp159884_c1_seq1.mrna2;Target=comp159884_c1_seq1 404 394 .
Chr1	stalkie_big_nohaplotig	exon	124468435	124468438	100	+	.	Parent=comp159884_c1_seq1.mrna2;Target=comp159884_c1_seq1 408 405 .
Chr1	stalkie_big_nohaplotig	exon	124472412	124472415	100	+	.	Parent=comp159884_c1_seq1.mrna2;Target=comp159884_c1_seq1 427 424 .
Chr1	stalkie_big_nohaplotig	exon	124477379	124477383	100	+	.	Parent=comp159884_c1_seq1.mrna2;Target=comp159884_c1_seq1 432 428 .
Chr1	stalkie_big_nohaplotig	exon	124490124	124490131	100	+	.	Parent=comp159884_c1_seq1.mrna2;Target=comp159884_c1_seq1 440 433 .
Chr1	stalkie_big_nohaplotig	exon	124491295	124491303	100	+	.	Parent=comp159884_c1_seq1.mrna2;Target=comp159884_c1_seq1 449 441 .
Chr1	stalkie_big_nohaplotig	exon	124500606	124500610	100	+	.	Parent=comp159884_c1_seq1.mrna2;Target=comp159884_c1_seq1 471 467 .
Chr1	stalkie_big_nohaplotig	exon	124504540	124504548	100	+	.	Parent=comp159884_c1_seq1.mrna2;Target=comp159884_c1_seq1 480 472 .
Chr1	stalkie_big_nohaplotig	exon	124508211	124508218	100	+	.	Parent=comp159884_c1_seq1.mrna2;Target=comp159884_c1_seq1 488 481 .
Chr1	stalkie_big_nohaplotig	exon	124510570	124510576	100	+	.	Parent=comp159884_c1_seq1.mrna2;Target=comp159884_c1_seq1 495 489 .
Chr1	stalkie_big_nohaplotig	exon	124513013	124513014	100	+	.	Parent=comp159884_c1_seq1.mrna2;Target=comp159884_c1_seq1 497 496 .
Chr1	stalkie_big_nohaplotig	exon	124520777	124520780	100	+	.	Parent=comp159884_c1_seq1.mrna2;Target=comp159884_c1_seq1 501 498 .
Chr1	stalkie_big_nohaplotig	exon	124527403	124527408	100	+	.	Parent=comp159884_c1_seq1.mrna2;Target=comp159884_c1_seq1 507 502 .
Chr1	stalkie_big_nohaplotig	exon	124527436	124527442	100	+	.	Parent=comp159884_c1_seq1.mrna2;Target=comp159884_c1_seq1 563 557 .
Chr1	stalkie_big_nohaplotig	exon	124528521	124528529	88	+	.	Parent=comp159884_c1_seq1.mrna2;Target=comp159884_c1_seq1 572 564 .
Chr1	stalkie_big_nohaplotig	exon	124535488	124535502	93	+	.	Parent=comp159884_c1_seq1.mrna2;Target=comp159884_c1_seq1 588 573 .
Chr1	stalkie_big_nohaplotig	exon	124552455	124552508	50	+	.	Parent=comp159884_c1_seq1.mrna2;Target=comp159884_c1_seq1 661 589 .
Chr1	stalkie_big_nohaplotig	exon	124553682	124553691	100	+	.	Parent=comp159884_c1_seq1.mrna2;Target=comp159884_c1_seq1 671 662 .
Chr1	stalkie_big_nohaplotig	exon	124566574	124567952	98	+	.	Parent=comp159884_c1_seq1.mrna2;Target=comp159884_c1_seq1 2057 688 .
Chr1	stalkie_big_nohaplotig	CDS	124566915	124567174	.	+	0	Parent=comp159884_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	124507563	124510924	.	+	.	ID=FBgn0016034.3.mrna1;geneID=FBgn0016034.3.path1;Name=FBgn0016034.3;Dir=sensecoverage=100.0;identity=99.6;matches=1222;mismatches=4;indels=1;unknowns=0;locus=RLOC_00010838
Chr1	stalkie_big_nohaplotig	exon	124507563	124507718	100	+	.	Parent=FBgn0016034.3.mrna1;Target=FBgn0016034.3 1 156 +
Chr1	stalkie_big_nohaplotig	exon	124509445	124509652	100	+	.	Parent=FBgn0016034.3.mrna1;Target=FBgn0016034.3 157 364 +
Chr1	stalkie_big_nohaplotig	exon	124509772	124509921	100	+	.	Parent=FBgn0016034.3.mrna1;Target=FBgn0016034.3 365 514 +
Chr1	stalkie_big_nohaplotig	exon	124510100	124510491	99	+	.	Parent=FBgn0016034.3.mrna1;Target=FBgn0016034.3 515 906 +
Chr1	stalkie_big_nohaplotig	exon	124510605	124510924	99	+	.	Parent=FBgn0016034.3.mrna1;Target=FBgn0016034.3 907 1227 +
Chr1	stalkie_big_nohaplotig	CDS	124507563	124507718	.	+	0	Parent=FBgn0016034.3.mrna1;Target=FBgn0016034.3 1 156 +
Chr1	stalkie_big_nohaplotig	CDS	124509445	124509652	.	+	0	Parent=FBgn0016034.3.mrna1;Target=FBgn0016034.3 157 364 +
Chr1	stalkie_big_nohaplotig	CDS	124509772	124509921	.	+	2	Parent=FBgn0016034.3.mrna1;Target=FBgn0016034.3 365 514 +
Chr1	stalkie_big_nohaplotig	CDS	124510100	124510491	.	+	2	Parent=FBgn0016034.3.mrna1;Target=FBgn0016034.3 515 906 +
Chr1	stalkie_big_nohaplotig	CDS	124510605	124510924	.	+	0	Parent=FBgn0016034.3.mrna1;Target=FBgn0016034.3 907 1227 +
Chr1	stalkie_big_nohaplotig	mRNA	124507696	124509407	.	-	.	ID=comp161188_c2_seq1.mrna1;geneID=comp161188_c2_seq1.path1;Name=comp161188_c2_seq1;Dir=indeterminatecoverage=99.8;identity=95.0;matches=1647;mismatches=52;indels=34;unknowns=0;Target=comp161188_c2_seq1 1724 5 .;CDS_Target=comp161188_c2_seq1 478 404 .;locus=RLOC_00010838
Chr1	stalkie_big_nohaplotig	exon	124507696	124509407	95	-	.	Parent=comp161188_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124508933	124509007	.	-	0	Parent=comp161188_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124552834	124553730	.	+	.	ID=comp150617_c0_seq1.mrna1;geneID=comp150617_c0_seq1.path1;Name=comp150617_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=893;mismatches=4;indels=1;unknowns=0;Target=comp150617_c0_seq1 898 1 .;CDS_Target=comp150617_c0_seq1 171 1 .;locus=RLOC_00010838
Chr1	stalkie_big_nohaplotig	exon	124552834	124553730	99	+	.	Parent=comp150617_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124552834	124553004	.	+	0	Parent=comp150617_c0_seq1.mrna1
Chr1	gffcl	locus	124496396	124498898	.	+	.	ID=RLOC_00010839;geneIDs=FBgn0039944.1.path1;transcripts=FBgn0039944.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124496396	124498898	.	+	.	ID=FBgn0039944.1.mrna1;geneID=FBgn0039944.1.path1;Name=FBgn0039944.1;Dir=sensecoverage=100.0;identity=99.8;matches=650;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010839
Chr1	stalkie_big_nohaplotig	exon	124496396	124496837	99	+	.	Parent=FBgn0039944.1.mrna1;Target=FBgn0039944.1 1 442 +
Chr1	stalkie_big_nohaplotig	exon	124498690	124498898	100	+	.	Parent=FBgn0039944.1.mrna1;Target=FBgn0039944.1 443 651 +
Chr1	stalkie_big_nohaplotig	CDS	124496396	124496837	.	+	0	Parent=FBgn0039944.1.mrna1;Target=FBgn0039944.1 1 442 +
Chr1	stalkie_big_nohaplotig	CDS	124498690	124498898	.	+	2	Parent=FBgn0039944.1.mrna1;Target=FBgn0039944.1 443 651 +
Chr1	gffcl	locus	124499673	124499848	.	-	.	ID=RLOC_00010840;geneIDs=comp142909_c0_seq1.path1;transcripts=comp142909_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124499673	124499848	.	-	.	ID=comp142909_c0_seq1.mrna1;geneID=comp142909_c0_seq1.path1;Name=comp142909_c0_seq1;Dir=indeterminatecoverage=73.6;identity=98.9;matches=174;mismatches=2;indels=0;unknowns=0;Target=comp142909_c0_seq1 176 1 .;CDS_Target=comp142909_c0_seq1 60 1 .;locus=RLOC_00010840
Chr1	stalkie_big_nohaplotig	exon	124499673	124499848	98	-	.	Parent=comp142909_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124499789	124499848	.	-	0	Parent=comp142909_c0_seq1.mrna1
Chr1	gffcl	locus	124504770	124506130	.	+	.	ID=RLOC_00010841;geneIDs=FBgn0039943.1.path2,FBgn0039943.2.path1;transcripts=FBgn0039943.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124504770	124506130	.	+	.	ID=FBgn0039943.2.mrna1;geneID=FBgn0039943.2.path1;Name=FBgn0039943.2;Dir=sensecoverage=100.0;identity=99.5;matches=1286;mismatches=7;indels=0;unknowns=0;locus=RLOC_00010841
Chr1	stalkie_big_nohaplotig	exon	124504770	124505380	99	+	.	Parent=FBgn0039943.2.mrna1;Target=FBgn0039943.2 1 611 +
Chr1	stalkie_big_nohaplotig	exon	124505449	124506130	99	+	.	Parent=FBgn0039943.2.mrna1;Target=FBgn0039943.2 612 1293 +
Chr1	stalkie_big_nohaplotig	CDS	124504770	124505380	.	+	0	Parent=FBgn0039943.2.mrna1;Target=FBgn0039943.2 1 611 +
Chr1	stalkie_big_nohaplotig	CDS	124505449	124506130	.	+	1	Parent=FBgn0039943.2.mrna1;Target=FBgn0039943.2 612 1293 +
Chr1	gffcl	locus	124516056	124534222	.	-	.	ID=RLOC_00010842;geneIDs=FBgn0030421.1.path1;transcripts=FBgn0030421.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124516056	124534222	.	-	.	ID=FBgn0030421.1.mrna1;geneID=FBgn0030421.1.path1;Name=FBgn0030421.1;Dir=sensecoverage=100.0;identity=99.6;matches=1082;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010842
Chr1	stalkie_big_nohaplotig	exon	124516056	124516747	99	-	.	Parent=FBgn0030421.1.mrna1;Target=FBgn0030421.1 395 1086 +
Chr1	stalkie_big_nohaplotig	exon	124516835	124516968	100	-	.	Parent=FBgn0030421.1.mrna1;Target=FBgn0030421.1 261 394 +
Chr1	stalkie_big_nohaplotig	exon	124533963	124534222	99	-	.	Parent=FBgn0030421.1.mrna1;Target=FBgn0030421.1 1 260 +
Chr1	stalkie_big_nohaplotig	CDS	124516056	124516747	.	-	2	Parent=FBgn0030421.1.mrna1;Target=FBgn0030421.1 395 1086 +
Chr1	stalkie_big_nohaplotig	CDS	124516835	124516968	.	-	1	Parent=FBgn0030421.1.mrna1;Target=FBgn0030421.1 261 394 +
Chr1	stalkie_big_nohaplotig	CDS	124533963	124534222	.	-	0	Parent=FBgn0030421.1.mrna1;Target=FBgn0030421.1 1 260 +
Chr1	gffcl	locus	124542041	124542533	.	-	.	ID=RLOC_00010843;geneIDs=comp145474_c0_seq1.path1;transcripts=comp145474_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124542041	124542533	.	-	.	ID=comp145474_c0_seq1.mrna1;geneID=comp145474_c0_seq1.path1;Name=comp145474_c0_seq1;Dir=indeterminatecoverage=98.6;identity=99.4;matches=490;mismatches=3;indels=0;unknowns=0;Target=comp145474_c0_seq1 500 8 .;CDS_Target=comp145474_c0_seq1 82 8 .;locus=RLOC_00010843
Chr1	stalkie_big_nohaplotig	exon	124542041	124542533	99	-	.	Parent=comp145474_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124542459	124542533	.	-	0	Parent=comp145474_c0_seq1.mrna1
Chr1	gffcl	locus	124548010	124548904	.	-	.	ID=RLOC_00010844;geneIDs=comp112805_c0_seq1.path1;transcripts=comp112805_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124548010	124548904	.	-	.	ID=comp112805_c0_seq1.mrna1;geneID=comp112805_c0_seq1.path1;Name=comp112805_c0_seq1;Dir=indeterminatecoverage=98.7;identity=98.4;matches=886;mismatches=4;indels=10;unknowns=0;Target=comp112805_c0_seq1 907 13 .;CDS_Target=comp112805_c0_seq1 112 14 .;locus=RLOC_00010844
Chr1	stalkie_big_nohaplotig	exon	124548010	124548904	98	-	.	Parent=comp112805_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124548804	124548903	.	-	0	Parent=comp112805_c0_seq1.mrna1
Chr1	gffcl	locus	124549020	124549958	.	+	.	ID=RLOC_00010845;geneIDs=comp155193_c0_seq1.path1;transcripts=comp155193_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124549020	124549958	.	+	.	ID=comp155193_c0_seq1.mrna1;geneID=comp155193_c0_seq1.path1;Name=comp155193_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=932;mismatches=4;indels=11;unknowns=0;Target=comp155193_c0_seq1 944 1 .;CDS_Target=comp155193_c0_seq1 395 291 .;locus=RLOC_00010845
Chr1	stalkie_big_nohaplotig	exon	124549020	124549958	98	+	.	Parent=comp155193_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124549304	124549408	.	+	0	Parent=comp155193_c0_seq1.mrna1
Chr1	gffcl	locus	124555191	126267294	.	+	.	ID=RLOC_00010846;geneIDs=comp137739_c0_seq1.path1;transcripts=comp137739_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124555191	126267294	.	+	.	ID=comp137739_c0_seq1.mrna1;geneID=comp137739_c0_seq1.path1;Name=comp137739_c0_seq1;Dir=indeterminatecoverage=79.8;identity=98.8;matches=672;mismatches=5;indels=3;unknowns=0;Target=comp137739_c0_seq1 27 4 .;locus=RLOC_00010846
Chr1	stalkie_big_nohaplotig	exon	124555191	124555854	98	+	.	Parent=comp137739_c0_seq1.mrna1;Target=comp137739_c0_seq1 663 3 .
Chr1	stalkie_big_nohaplotig	exon	126259784	126259788	100	+	.	Parent=comp137739_c0_seq1.mrna1;Target=comp137739_c0_seq1 668 664 .
Chr1	stalkie_big_nohaplotig	exon	126267284	126267294	100	+	.	Parent=comp137739_c0_seq1.mrna1;Target=comp137739_c0_seq1 679 669 .
Chr1	stalkie_big_nohaplotig	CDS	124555192	124555217	.	+	0	Parent=comp137739_c0_seq1.mrna1
Chr1	gffcl	locus	124576640	124577320	.	-	.	ID=RLOC_00010847;geneIDs=comp117138_c0_seq1.path1;transcripts=comp117138_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124576640	124577320	.	-	.	ID=comp117138_c0_seq1.mrna1;geneID=comp117138_c0_seq1.path1;Name=comp117138_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=680;mismatches=1;indels=1;unknowns=0;Target=comp117138_c0_seq1 682 1 .;CDS_Target=comp117138_c0_seq1 95 3 .;locus=RLOC_00010847
Chr1	stalkie_big_nohaplotig	exon	124576640	124577320	99	-	.	Parent=comp117138_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124577226	124577318	.	-	0	Parent=comp117138_c0_seq1.mrna1
Chr1	gffcl	locus	124613474	124619835	.	+	.	ID=RLOC_00010848;geneIDs=comp150017_c0_seq1.path1;transcripts=comp150017_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124613474	124619835	.	+	.	ID=comp150017_c0_seq1.mrna1;geneID=comp150017_c0_seq1.path1;Name=comp150017_c0_seq1;Dir=sensecoverage=98.0;identity=88.4;matches=658;mismatches=25;indels=61;unknowns=0;Target=comp150017_c0_seq1 562 603 +;locus=RLOC_00010848
Chr1	stalkie_big_nohaplotig	exon	124613474	124613694	93	+	.	Parent=comp150017_c0_seq1.mrna1;Target=comp150017_c0_seq1 1 222 +
Chr1	stalkie_big_nohaplotig	exon	124619179	124619387	73	+	.	Parent=comp150017_c0_seq1.mrna1;Target=comp150017_c0_seq1 223 436 +
Chr1	stalkie_big_nohaplotig	exon	124619556	124619835	97	+	.	Parent=comp150017_c0_seq1.mrna1;Target=comp150017_c0_seq1 437 717 +
Chr1	stalkie_big_nohaplotig	CDS	124619681	124619722	.	+	0	Parent=comp150017_c0_seq1.mrna1
Chr1	gffcl	locus	124671261	124671469	.	+	.	ID=RLOC_00010849;geneIDs=comp146191_c0_seq1.path1;transcripts=comp146191_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124671261	124671469	.	+	.	ID=comp146191_c0_seq1.mrna1;geneID=comp146191_c0_seq1.path1;Name=comp146191_c0_seq1;Dir=indeterminatecoverage=99.5;identity=92.3;matches=193;mismatches=15;indels=1;unknowns=0;Target=comp146191_c0_seq1 208 1 .;CDS_Target=comp146191_c0_seq1 54 10 .;locus=RLOC_00010849
Chr1	stalkie_big_nohaplotig	exon	124671261	124671469	92	+	.	Parent=comp146191_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124671270	124671314	.	+	0	Parent=comp146191_c0_seq1.mrna1
Chr1	gffcl	locus	124671589	124672333	.	+	.	ID=RLOC_00010850;geneIDs=comp117050_c0_seq1.path1;transcripts=comp117050_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124671589	124672333	.	+	.	ID=comp117050_c0_seq1.mrna1;geneID=comp117050_c0_seq1.path1;Name=comp117050_c0_seq1;Dir=antisensecoverage=99.6;identity=97.1;matches=272;mismatches=8;indels=0;unknowns=0;Target=comp117050_c0_seq1 240 281 .;locus=RLOC_00010850
Chr1	stalkie_big_nohaplotig	exon	124671589	124671632	97	+	.	Parent=comp117050_c0_seq1.mrna1;Target=comp117050_c0_seq1 238 281 -
Chr1	stalkie_big_nohaplotig	exon	124671695	124671874	98	+	.	Parent=comp117050_c0_seq1.mrna1;Target=comp117050_c0_seq1 58 237 -
Chr1	stalkie_big_nohaplotig	exon	124672278	124672333	91	+	.	Parent=comp117050_c0_seq1.mrna1;Target=comp117050_c0_seq1 2 57 -
Chr1	stalkie_big_nohaplotig	CDS	124671589	124671630	.	+	0	Parent=comp117050_c0_seq1.mrna1
Chr1	gffcl	locus	124673611	124673661	.	+	.	ID=RLOC_00010851;geneIDs=FBgn0261955.1.path1;transcripts=FBgn0261955.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124673611	124673661	.	+	.	ID=FBgn0261955.1.mrna1;geneID=FBgn0261955.1.path1;Name=FBgn0261955.1;Dir=indeterminatecoverage=3.6;identity=100.0;matches=51;mismatches=0;indels=0;unknowns=0;Target=FBgn0261955.1 51 1 .;locus=RLOC_00010851
Chr1	stalkie_big_nohaplotig	exon	124673611	124673661	100	+	.	Parent=FBgn0261955.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124673611	124673661	.	+	0	Parent=FBgn0261955.1.mrna1
Chr1	gffcl	locus	124720698	124720803	.	-	.	ID=RLOC_00010852;geneIDs=FBgn0039941.2.path1;transcripts=FBgn0039941.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124720698	124720803	.	-	.	ID=FBgn0039941.2.mrna1;geneID=FBgn0039941.2.path1;Name=FBgn0039941.2;Dir=indeterminatecoverage=6.8;identity=99.1;matches=105;mismatches=1;indels=0;unknowns=0;Target=FBgn0039941.2 106 1 .;locus=RLOC_00010852
Chr1	stalkie_big_nohaplotig	exon	124720698	124720803	99	-	.	Parent=FBgn0039941.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124720698	124720803	.	-	0	Parent=FBgn0039941.2.mrna1
Chr1	gffcl	locus	124741058	124742670	.	-	.	ID=RLOC_00010853;geneIDs=FBgn0040031.1.path1;transcripts=FBgn0040031.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124741058	124742670	.	-	.	ID=FBgn0040031.1.mrna1;geneID=FBgn0040031.1.path1;Name=FBgn0040031.1;Dir=sensecoverage=100.0;identity=98.8;matches=1304;mismatches=16;indels=0;unknowns=0;locus=RLOC_00010853
Chr1	stalkie_big_nohaplotig	exon	124741058	124741359	98	-	.	Parent=FBgn0040031.1.mrna1;Target=FBgn0040031.1 1019 1320 +
Chr1	stalkie_big_nohaplotig	exon	124741416	124741517	99	-	.	Parent=FBgn0040031.1.mrna1;Target=FBgn0040031.1 917 1018 +
Chr1	stalkie_big_nohaplotig	exon	124741576	124741881	97	-	.	Parent=FBgn0040031.1.mrna1;Target=FBgn0040031.1 611 916 +
Chr1	stalkie_big_nohaplotig	exon	124741932	124742118	100	-	.	Parent=FBgn0040031.1.mrna1;Target=FBgn0040031.1 424 610 +
Chr1	stalkie_big_nohaplotig	exon	124742181	124742368	99	-	.	Parent=FBgn0040031.1.mrna1;Target=FBgn0040031.1 236 423 +
Chr1	stalkie_big_nohaplotig	exon	124742436	124742670	99	-	.	Parent=FBgn0040031.1.mrna1;Target=FBgn0040031.1 1 235 +
Chr1	stalkie_big_nohaplotig	CDS	124741058	124741359	.	-	2	Parent=FBgn0040031.1.mrna1;Target=FBgn0040031.1 1019 1320 +
Chr1	stalkie_big_nohaplotig	CDS	124741416	124741517	.	-	2	Parent=FBgn0040031.1.mrna1;Target=FBgn0040031.1 917 1018 +
Chr1	stalkie_big_nohaplotig	CDS	124741576	124741881	.	-	2	Parent=FBgn0040031.1.mrna1;Target=FBgn0040031.1 611 916 +
Chr1	stalkie_big_nohaplotig	CDS	124741932	124742118	.	-	0	Parent=FBgn0040031.1.mrna1;Target=FBgn0040031.1 424 610 +
Chr1	stalkie_big_nohaplotig	CDS	124742181	124742368	.	-	2	Parent=FBgn0040031.1.mrna1;Target=FBgn0040031.1 236 423 +
Chr1	stalkie_big_nohaplotig	CDS	124742436	124742670	.	-	0	Parent=FBgn0040031.1.mrna1;Target=FBgn0040031.1 1 235 +
Chr1	gffcl	locus	124745242	124768853	.	-	.	ID=RLOC_00010854;geneIDs=FBgn0040030.1.path1,comp160324_c0_seq1.path1;transcripts=comp160324_c0_seq1.mrna1,FBgn0040030.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124745242	124750159	.	-	.	ID=comp160324_c0_seq1.mrna1;geneID=comp160324_c0_seq1.path1;Name=comp160324_c0_seq1;Dir=antisensecoverage=96.8;identity=99.2;matches=2571;mismatches=15;indels=5;unknowns=0;locus=RLOC_00010854
Chr1	stalkie_big_nohaplotig	exon	124745242	124746638	99	-	.	Parent=comp160324_c0_seq1.mrna1;Target=comp160324_c0_seq1 1 1397 -
Chr1	stalkie_big_nohaplotig	exon	124748503	124748604	100	-	.	Parent=comp160324_c0_seq1.mrna1;Target=comp160324_c0_seq1 1398 1499 -
Chr1	stalkie_big_nohaplotig	exon	124748665	124749120	98	-	.	Parent=comp160324_c0_seq1.mrna1;Target=comp160324_c0_seq1 1500 1955 -
Chr1	stalkie_big_nohaplotig	exon	124749212	124749295	97	-	.	Parent=comp160324_c0_seq1.mrna1;Target=comp160324_c0_seq1 1956 2040 -
Chr1	stalkie_big_nohaplotig	exon	124749479	124749665	100	-	.	Parent=comp160324_c0_seq1.mrna1;Target=comp160324_c0_seq1 2041 2227 -
Chr1	stalkie_big_nohaplotig	exon	124749728	124749915	100	-	.	Parent=comp160324_c0_seq1.mrna1;Target=comp160324_c0_seq1 2228 2415 -
Chr1	stalkie_big_nohaplotig	exon	124749986	124750159	98	-	.	Parent=comp160324_c0_seq1.mrna1;Target=comp160324_c0_seq1 2416 2589 -
Chr1	stalkie_big_nohaplotig	CDS	124749229	124749295	.	-	2	Parent=comp160324_c0_seq1.mrna1;Target=comp160324_c0_seq1 1973 2040 .
Chr1	stalkie_big_nohaplotig	CDS	124749479	124749665	.	-	0	Parent=comp160324_c0_seq1.mrna1;Target=comp160324_c0_seq1 2041 2227 .
Chr1	stalkie_big_nohaplotig	CDS	124749728	124749915	.	-	2	Parent=comp160324_c0_seq1.mrna1;Target=comp160324_c0_seq1 2228 2415 .
Chr1	stalkie_big_nohaplotig	CDS	124749986	124750157	.	-	0	Parent=comp160324_c0_seq1.mrna1;Target=comp160324_c0_seq1 2416 2587 .
Chr1	stalkie_big_nohaplotig	mRNA	124746304	124768853	.	-	.	ID=FBgn0040030.1.mrna1;geneID=FBgn0040030.1.path1;Name=FBgn0040030.1;Dir=sensecoverage=98.8;identity=99.4;matches=1500;mismatches=9;indels=0;unknowns=0;locus=RLOC_00010854
Chr1	stalkie_big_nohaplotig	exon	124746304	124746638	99	-	.	Parent=FBgn0040030.1.mrna1;Target=FBgn0040030.1 1193 1527 +
Chr1	stalkie_big_nohaplotig	exon	124748503	124748604	100	-	.	Parent=FBgn0040030.1.mrna1;Target=FBgn0040030.1 1091 1192 +
Chr1	stalkie_big_nohaplotig	exon	124748665	124749120	98	-	.	Parent=FBgn0040030.1.mrna1;Target=FBgn0040030.1 635 1090 +
Chr1	stalkie_big_nohaplotig	exon	124749479	124749665	100	-	.	Parent=FBgn0040030.1.mrna1;Target=FBgn0040030.1 448 634 +
Chr1	stalkie_big_nohaplotig	exon	124749728	124749915	100	-	.	Parent=FBgn0040030.1.mrna1;Target=FBgn0040030.1 260 447 +
Chr1	stalkie_big_nohaplotig	exon	124749986	124750159	98	-	.	Parent=FBgn0040030.1.mrna1;Target=FBgn0040030.1 86 259 +
Chr1	stalkie_big_nohaplotig	exon	124768787	124768853	100	-	.	Parent=FBgn0040030.1.mrna1;Target=FBgn0040030.1 19 85 +
Chr1	stalkie_big_nohaplotig	CDS	124746304	124746638	.	-	2	Parent=FBgn0040030.1.mrna1;Target=FBgn0040030.1 1193 1527 +
Chr1	stalkie_big_nohaplotig	CDS	124748503	124748604	.	-	2	Parent=FBgn0040030.1.mrna1;Target=FBgn0040030.1 1091 1192 +
Chr1	stalkie_big_nohaplotig	CDS	124748665	124749120	.	-	2	Parent=FBgn0040030.1.mrna1;Target=FBgn0040030.1 635 1090 +
Chr1	stalkie_big_nohaplotig	CDS	124749479	124749665	.	-	0	Parent=FBgn0040030.1.mrna1;Target=FBgn0040030.1 448 634 +
Chr1	stalkie_big_nohaplotig	CDS	124749728	124749915	.	-	2	Parent=FBgn0040030.1.mrna1;Target=FBgn0040030.1 260 447 +
Chr1	stalkie_big_nohaplotig	CDS	124749986	124750159	.	-	2	Parent=FBgn0040030.1.mrna1;Target=FBgn0040030.1 86 259 +
Chr1	stalkie_big_nohaplotig	CDS	124768787	124768853	.	-	0	Parent=FBgn0040030.1.mrna1;Target=FBgn0040030.1 19 85 +
Chr1	stalkie_big_nohaplotig	mRNA	124809826	124810425	.	-	.	ID=comp163859_c4_seq1.mrna2;geneID=comp163859_c4_seq1.path2;Name=comp163859_c4_seq1;Dir=indeterminatecoverage=35.1;identity=95.7;matches=574;mismatches=12;indels=14;unknowns=0;Target=comp163859_c4_seq1 1667 1082 .;locus=RLOC_00010855
Chr1	stalkie_big_nohaplotig	exon	124809826	124810425	95	-	.	Parent=comp163859_c4_seq1.mrna2
Chr1	gffcl	locus	124782768	124785314	.	-	.	ID=RLOC_00010856;geneIDs=FBgn0039965.1.path1;transcripts=FBgn0039965.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124782768	124785314	.	-	.	ID=FBgn0039965.1.mrna1;geneID=FBgn0039965.1.path1;Name=FBgn0039965.1;Dir=sensecoverage=100.0;identity=99.6;matches=759;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010856
Chr1	stalkie_big_nohaplotig	exon	124782768	124783133	99	-	.	Parent=FBgn0039965.1.mrna1;Target=FBgn0039965.1 397 762 +
Chr1	stalkie_big_nohaplotig	exon	124784804	124785093	99	-	.	Parent=FBgn0039965.1.mrna1;Target=FBgn0039965.1 107 396 +
Chr1	stalkie_big_nohaplotig	exon	124785209	124785314	100	-	.	Parent=FBgn0039965.1.mrna1;Target=FBgn0039965.1 1 106 +
Chr1	stalkie_big_nohaplotig	CDS	124782768	124783133	.	-	0	Parent=FBgn0039965.1.mrna1;Target=FBgn0039965.1 397 762 +
Chr1	stalkie_big_nohaplotig	CDS	124784804	124785093	.	-	2	Parent=FBgn0039965.1.mrna1;Target=FBgn0039965.1 107 396 +
Chr1	stalkie_big_nohaplotig	CDS	124785209	124785314	.	-	0	Parent=FBgn0039965.1.mrna1;Target=FBgn0039965.1 1 106 +
Chr1	gffcl	locus	124786695	124788654	.	-	.	ID=RLOC_00010857;geneIDs=FBgn0261955.2.path1;transcripts=FBgn0261955.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124786695	124788654	.	-	.	ID=FBgn0261955.2.mrna1;geneID=FBgn0261955.2.path1;Name=FBgn0261955.2;Dir=sensecoverage=99.0;identity=99.5;matches=1398;mismatches=7;indels=0;unknowns=0;locus=RLOC_00010857
Chr1	stalkie_big_nohaplotig	exon	124786695	124787085	99	-	.	Parent=FBgn0261955.2.mrna1;Target=FBgn0261955.2 1015 1405 +
Chr1	stalkie_big_nohaplotig	exon	124787151	124787609	100	-	.	Parent=FBgn0261955.2.mrna1;Target=FBgn0261955.2 556 1014 +
Chr1	stalkie_big_nohaplotig	exon	124787681	124787836	99	-	.	Parent=FBgn0261955.2.mrna1;Target=FBgn0261955.2 400 555 +
Chr1	stalkie_big_nohaplotig	exon	124787911	124788114	98	-	.	Parent=FBgn0261955.2.mrna1;Target=FBgn0261955.2 196 399 +
Chr1	stalkie_big_nohaplotig	exon	124788175	124788315	99	-	.	Parent=FBgn0261955.2.mrna1;Target=FBgn0261955.2 55 195 +
Chr1	stalkie_big_nohaplotig	exon	124788601	124788654	100	-	.	Parent=FBgn0261955.2.mrna1;Target=FBgn0261955.2 1 54 +
Chr1	stalkie_big_nohaplotig	CDS	124786696	124787085	.	-	0	Parent=FBgn0261955.2.mrna1;Target=FBgn0261955.2 1015 1404 +
Chr1	stalkie_big_nohaplotig	CDS	124787151	124787609	.	-	0	Parent=FBgn0261955.2.mrna1;Target=FBgn0261955.2 556 1014 +
Chr1	stalkie_big_nohaplotig	CDS	124787681	124787836	.	-	0	Parent=FBgn0261955.2.mrna1;Target=FBgn0261955.2 400 555 +
Chr1	stalkie_big_nohaplotig	CDS	124787911	124788114	.	-	0	Parent=FBgn0261955.2.mrna1;Target=FBgn0261955.2 196 399 +
Chr1	stalkie_big_nohaplotig	CDS	124788175	124788315	.	-	0	Parent=FBgn0261955.2.mrna1;Target=FBgn0261955.2 55 195 +
Chr1	stalkie_big_nohaplotig	CDS	124788601	124788654	.	-	0	Parent=FBgn0261955.2.mrna1;Target=FBgn0261955.2 1 54 +
Chr1	gffcl	locus	124793694	124797193	.	-	.	ID=RLOC_00010858;geneIDs=FBgn0261955.1.path2;transcripts=FBgn0261955.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	124793694	124797193	.	-	.	ID=FBgn0261955.1.mrna2;geneID=FBgn0261955.1.path2;Name=FBgn0261955.1;Dir=sensecoverage=96.4;identity=99.9;matches=1345;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010858
Chr1	stalkie_big_nohaplotig	exon	124793694	124794062	100	-	.	Parent=FBgn0261955.1.mrna2;Target=FBgn0261955.1 1030 1398 +
Chr1	stalkie_big_nohaplotig	exon	124794126	124794584	100	-	.	Parent=FBgn0261955.1.mrna2;Target=FBgn0261955.1 571 1029 +
Chr1	stalkie_big_nohaplotig	exon	124794655	124795014	99	-	.	Parent=FBgn0261955.1.mrna2;Target=FBgn0261955.1 211 570 +
Chr1	stalkie_big_nohaplotig	exon	124797035	124797193	99	-	.	Parent=FBgn0261955.1.mrna2;Target=FBgn0261955.1 52 210 +
Chr1	stalkie_big_nohaplotig	CDS	124793694	124794062	.	-	0	Parent=FBgn0261955.1.mrna2;Target=FBgn0261955.1 1030 1398 +
Chr1	stalkie_big_nohaplotig	CDS	124794126	124794584	.	-	0	Parent=FBgn0261955.1.mrna2;Target=FBgn0261955.1 571 1029 +
Chr1	stalkie_big_nohaplotig	CDS	124794655	124795014	.	-	0	Parent=FBgn0261955.1.mrna2;Target=FBgn0261955.1 211 570 +
Chr1	stalkie_big_nohaplotig	CDS	124797035	124797193	.	-	0	Parent=FBgn0261955.1.mrna2;Target=FBgn0261955.1 52 210 +
Chr1	gffcl	locus	124812720	124813783	.	-	.	ID=RLOC_00010859;geneIDs=comp148696_c2_seq1.path2;transcripts=comp148696_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	124812720	124813783	.	-	.	ID=comp148696_c2_seq1.mrna2;geneID=comp148696_c2_seq1.path2;Name=comp148696_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1055;mismatches=9;indels=0;unknowns=0;Target=comp148696_c2_seq1 1064 1 .;CDS_Target=comp148696_c2_seq1 355 2 .;locus=RLOC_00010859
Chr1	stalkie_big_nohaplotig	exon	124812720	124813783	99	-	.	Parent=comp148696_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	124813429	124813782	.	-	0	Parent=comp148696_c2_seq1.mrna2
Chr1	gffcl	locus	124823932	124825020	.	+	.	ID=RLOC_00010860;geneIDs=comp163499_c0_seq1.path3;transcripts=comp163499_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	124823932	124825020	.	+	.	ID=comp163499_c0_seq1.mrna3;geneID=comp163499_c0_seq1.path3;Name=comp163499_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.2;matches=1059;mismatches=30;indels=0;unknowns=0;Target=comp163499_c0_seq1 1090 2 .;locus=RLOC_00010860
Chr1	stalkie_big_nohaplotig	exon	124823932	124825020	97	+	.	Parent=comp163499_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	124823932	124825020	.	+	0	Parent=comp163499_c0_seq1.mrna3
Chr1	gffcl	locus	124830539	124831200	.	+	.	ID=RLOC_00010861;geneIDs=comp117462_c0_seq1.path2;transcripts=comp117462_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	124830539	124831200	.	+	.	ID=comp117462_c0_seq1.mrna2;geneID=comp117462_c0_seq1.path2;Name=comp117462_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=661;mismatches=1;indels=3;unknowns=0;Target=comp117462_c0_seq1 665 1 .;CDS_Target=comp117462_c0_seq1 281 117 .;locus=RLOC_00010861
Chr1	stalkie_big_nohaplotig	exon	124830539	124831200	99	+	.	Parent=comp117462_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	124830655	124830819	.	+	0	Parent=comp117462_c0_seq1.mrna2
Chr1	gffcl	locus	124846779	124847382	.	+	.	ID=RLOC_00010862;geneIDs=FBgn0052280.1.path1;transcripts=FBgn0052280.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124846779	124847382	.	+	.	ID=FBgn0052280.1.mrna1;geneID=FBgn0052280.1.path1;Name=FBgn0052280.1;Dir=sensecoverage=100.0;identity=100.0;matches=471;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010862
Chr1	stalkie_big_nohaplotig	exon	124846779	124847146	100	+	.	Parent=FBgn0052280.1.mrna1;Target=FBgn0052280.1 1 368 +
Chr1	stalkie_big_nohaplotig	exon	124847280	124847382	100	+	.	Parent=FBgn0052280.1.mrna1;Target=FBgn0052280.1 369 471 +
Chr1	stalkie_big_nohaplotig	CDS	124846779	124847146	.	+	0	Parent=FBgn0052280.1.mrna1;Target=FBgn0052280.1 1 368 +
Chr1	stalkie_big_nohaplotig	CDS	124847280	124847382	.	+	1	Parent=FBgn0052280.1.mrna1;Target=FBgn0052280.1 369 471 +
Chr1	gffcl	locus	124851733	124853866	.	+	.	ID=RLOC_00010863;geneIDs=FBgn0261562.2.path1;transcripts=FBgn0261562.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124851733	124853866	.	+	.	ID=FBgn0261562.2.mrna1;geneID=FBgn0261562.2.path1;Name=FBgn0261562.2;Dir=sensecoverage=99.7;identity=98.1;matches=1089;mismatches=21;indels=0;unknowns=0;locus=RLOC_00010863
Chr1	stalkie_big_nohaplotig	exon	124851733	124851874	99	+	.	Parent=FBgn0261562.2.mrna1;Target=FBgn0261562.2 4 145 +
Chr1	stalkie_big_nohaplotig	exon	124852154	124852288	99	+	.	Parent=FBgn0261562.2.mrna1;Target=FBgn0261562.2 146 280 +
Chr1	stalkie_big_nohaplotig	exon	124852377	124852892	96	+	.	Parent=FBgn0261562.2.mrna1;Target=FBgn0261562.2 281 796 +
Chr1	stalkie_big_nohaplotig	exon	124853487	124853589	98	+	.	Parent=FBgn0261562.2.mrna1;Target=FBgn0261562.2 797 899 +
Chr1	stalkie_big_nohaplotig	exon	124853653	124853866	99	+	.	Parent=FBgn0261562.2.mrna1;Target=FBgn0261562.2 900 1113 +
Chr1	stalkie_big_nohaplotig	CDS	124851733	124851874	.	+	0	Parent=FBgn0261562.2.mrna1;Target=FBgn0261562.2 4 145 +
Chr1	stalkie_big_nohaplotig	CDS	124852154	124852288	.	+	2	Parent=FBgn0261562.2.mrna1;Target=FBgn0261562.2 146 280 +
Chr1	stalkie_big_nohaplotig	CDS	124852377	124852892	.	+	2	Parent=FBgn0261562.2.mrna1;Target=FBgn0261562.2 281 796 +
Chr1	stalkie_big_nohaplotig	CDS	124853487	124853589	.	+	2	Parent=FBgn0261562.2.mrna1;Target=FBgn0261562.2 797 899 +
Chr1	stalkie_big_nohaplotig	CDS	124853653	124853866	.	+	1	Parent=FBgn0261562.2.mrna1;Target=FBgn0261562.2 900 1113 +
Chr1	gffcl	locus	124858260	124860761	.	+	.	ID=RLOC_00010864;geneIDs=FBgn0002723.1.path1;transcripts=FBgn0002723.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124858260	124860761	.	+	.	ID=FBgn0002723.1.mrna1;geneID=FBgn0002723.1.path1;Name=FBgn0002723.1;Dir=sensecoverage=100.0;identity=99.5;matches=2272;mismatches=11;indels=0;unknowns=0;locus=RLOC_00010864
Chr1	stalkie_big_nohaplotig	exon	124858260	124859324	99	+	.	Parent=FBgn0002723.1.mrna1;Target=FBgn0002723.1 1 1065 +
Chr1	stalkie_big_nohaplotig	exon	124859544	124860761	99	+	.	Parent=FBgn0002723.1.mrna1;Target=FBgn0002723.1 1066 2283 +
Chr1	stalkie_big_nohaplotig	CDS	124858260	124859324	.	+	0	Parent=FBgn0002723.1.mrna1;Target=FBgn0002723.1 1 1065 +
Chr1	stalkie_big_nohaplotig	CDS	124859544	124860761	.	+	0	Parent=FBgn0002723.1.mrna1;Target=FBgn0002723.1 1066 2283 +
Chr1	gffcl	locus	124877282	124883955	.	+	.	ID=RLOC_00010865;geneIDs=FBgn0031089.1.path1,comp135548_c0_seq1.path1;transcripts=FBgn0031089.1.mrna1,comp135548_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124877282	124883955	.	+	.	ID=FBgn0031089.1.mrna1;geneID=FBgn0031089.1.path1;Name=FBgn0031089.1;Dir=sensecoverage=99.6;identity=99.7;matches=1323;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010865
Chr1	stalkie_big_nohaplotig	exon	124877282	124877472	100	+	.	Parent=FBgn0031089.1.mrna1;Target=FBgn0031089.1 6 196 +
Chr1	stalkie_big_nohaplotig	exon	124877833	124878065	99	+	.	Parent=FBgn0031089.1.mrna1;Target=FBgn0031089.1 197 429 +
Chr1	stalkie_big_nohaplotig	exon	124878125	124878206	100	+	.	Parent=FBgn0031089.1.mrna1;Target=FBgn0031089.1 430 511 +
Chr1	stalkie_big_nohaplotig	exon	124882925	124883016	100	+	.	Parent=FBgn0031089.1.mrna1;Target=FBgn0031089.1 512 603 +
Chr1	stalkie_big_nohaplotig	exon	124883087	124883474	99	+	.	Parent=FBgn0031089.1.mrna1;Target=FBgn0031089.1 604 991 +
Chr1	stalkie_big_nohaplotig	exon	124883544	124883677	99	+	.	Parent=FBgn0031089.1.mrna1;Target=FBgn0031089.1 992 1125 +
Chr1	stalkie_big_nohaplotig	exon	124883749	124883955	99	+	.	Parent=FBgn0031089.1.mrna1;Target=FBgn0031089.1 1126 1332 +
Chr1	stalkie_big_nohaplotig	CDS	124877283	124877472	.	+	0	Parent=FBgn0031089.1.mrna1;Target=FBgn0031089.1 7 196 +
Chr1	stalkie_big_nohaplotig	CDS	124877833	124878065	.	+	2	Parent=FBgn0031089.1.mrna1;Target=FBgn0031089.1 197 429 +
Chr1	stalkie_big_nohaplotig	CDS	124878125	124878206	.	+	0	Parent=FBgn0031089.1.mrna1;Target=FBgn0031089.1 430 511 +
Chr1	stalkie_big_nohaplotig	CDS	124882925	124883016	.	+	2	Parent=FBgn0031089.1.mrna1;Target=FBgn0031089.1 512 603 +
Chr1	stalkie_big_nohaplotig	CDS	124883087	124883474	.	+	0	Parent=FBgn0031089.1.mrna1;Target=FBgn0031089.1 604 991 +
Chr1	stalkie_big_nohaplotig	CDS	124883544	124883677	.	+	2	Parent=FBgn0031089.1.mrna1;Target=FBgn0031089.1 992 1125 +
Chr1	stalkie_big_nohaplotig	CDS	124883749	124883955	.	+	0	Parent=FBgn0031089.1.mrna1;Target=FBgn0031089.1 1126 1332 +
Chr1	stalkie_big_nohaplotig	mRNA	124877449	124877853	.	+	.	ID=comp135548_c0_seq1.mrna1;geneID=comp135548_c0_seq1.path1;Name=comp135548_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=400;mismatches=5;indels=0;unknowns=0;Target=comp135548_c0_seq1 405 1 .;CDS_Target=comp135548_c0_seq1 206 3 .;locus=RLOC_00010865
Chr1	stalkie_big_nohaplotig	exon	124877449	124877853	98	+	.	Parent=comp135548_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	124877451	124877654	.	+	0	Parent=comp135548_c0_seq1.mrna1
Chr1	gffcl	locus	124894705	124898293	.	+	.	ID=RLOC_00010866;geneIDs=FBgn0003559.1.path1;transcripts=FBgn0003559.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124894705	124898293	.	+	.	ID=FBgn0003559.1.mrna1;geneID=FBgn0003559.1.path1;Name=FBgn0003559.1;Dir=sensecoverage=100.0;identity=99.3;matches=2183;mismatches=16;indels=0;unknowns=0;locus=RLOC_00010866
Chr1	stalkie_big_nohaplotig	exon	124894705	124894767	98	+	.	Parent=FBgn0003559.1.mrna1;Target=FBgn0003559.1 1 63 +
Chr1	stalkie_big_nohaplotig	exon	124894828	124895150	99	+	.	Parent=FBgn0003559.1.mrna1;Target=FBgn0003559.1 64 386 +
Chr1	stalkie_big_nohaplotig	exon	124895213	124895488	98	+	.	Parent=FBgn0003559.1.mrna1;Target=FBgn0003559.1 387 662 +
Chr1	stalkie_big_nohaplotig	exon	124895582	124895693	99	+	.	Parent=FBgn0003559.1.mrna1;Target=FBgn0003559.1 663 774 +
Chr1	stalkie_big_nohaplotig	exon	124895759	124895950	99	+	.	Parent=FBgn0003559.1.mrna1;Target=FBgn0003559.1 775 966 +
Chr1	stalkie_big_nohaplotig	exon	124896437	124896628	99	+	.	Parent=FBgn0003559.1.mrna1;Target=FBgn0003559.1 967 1158 +
Chr1	stalkie_big_nohaplotig	exon	124896712	124897125	99	+	.	Parent=FBgn0003559.1.mrna1;Target=FBgn0003559.1 1159 1572 +
Chr1	stalkie_big_nohaplotig	exon	124897187	124897294	100	+	.	Parent=FBgn0003559.1.mrna1;Target=FBgn0003559.1 1573 1680 +
Chr1	stalkie_big_nohaplotig	exon	124897715	124898006	100	+	.	Parent=FBgn0003559.1.mrna1;Target=FBgn0003559.1 1681 1972 +
Chr1	stalkie_big_nohaplotig	exon	124898067	124898293	98	+	.	Parent=FBgn0003559.1.mrna1;Target=FBgn0003559.1 1973 2199 +
Chr1	stalkie_big_nohaplotig	CDS	124894705	124894767	.	+	0	Parent=FBgn0003559.1.mrna1;Target=FBgn0003559.1 1 63 +
Chr1	stalkie_big_nohaplotig	CDS	124894828	124895150	.	+	0	Parent=FBgn0003559.1.mrna1;Target=FBgn0003559.1 64 386 +
Chr1	stalkie_big_nohaplotig	CDS	124895213	124895488	.	+	1	Parent=FBgn0003559.1.mrna1;Target=FBgn0003559.1 387 662 +
Chr1	stalkie_big_nohaplotig	CDS	124895582	124895693	.	+	1	Parent=FBgn0003559.1.mrna1;Target=FBgn0003559.1 663 774 +
Chr1	stalkie_big_nohaplotig	CDS	124895759	124895950	.	+	0	Parent=FBgn0003559.1.mrna1;Target=FBgn0003559.1 775 966 +
Chr1	stalkie_big_nohaplotig	CDS	124896437	124896628	.	+	0	Parent=FBgn0003559.1.mrna1;Target=FBgn0003559.1 967 1158 +
Chr1	stalkie_big_nohaplotig	CDS	124896712	124897125	.	+	0	Parent=FBgn0003559.1.mrna1;Target=FBgn0003559.1 1159 1572 +
Chr1	stalkie_big_nohaplotig	CDS	124897187	124897294	.	+	0	Parent=FBgn0003559.1.mrna1;Target=FBgn0003559.1 1573 1680 +
Chr1	stalkie_big_nohaplotig	CDS	124897715	124898006	.	+	0	Parent=FBgn0003559.1.mrna1;Target=FBgn0003559.1 1681 1972 +
Chr1	stalkie_big_nohaplotig	CDS	124898067	124898293	.	+	2	Parent=FBgn0003559.1.mrna1;Target=FBgn0003559.1 1973 2199 +
Chr1	gffcl	locus	124900273	124907480	.	-	.	ID=RLOC_00010867;geneIDs=FBgn0033310.2.path1;transcripts=FBgn0033310.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124900273	124907480	.	-	.	ID=FBgn0033310.2.mrna1;geneID=FBgn0033310.2.path1;Name=FBgn0033310.2;Dir=sensecoverage=99.9;identity=99.6;matches=3133;mismatches=12;indels=0;unknowns=0;locus=RLOC_00010867
Chr1	stalkie_big_nohaplotig	exon	124900273	124901256	99	-	.	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 2164 3147 +
Chr1	stalkie_big_nohaplotig	exon	124901322	124901645	99	-	.	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 1840 2163 +
Chr1	stalkie_big_nohaplotig	exon	124901706	124901774	98	-	.	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 1771 1839 +
Chr1	stalkie_big_nohaplotig	exon	124903336	124903422	100	-	.	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 1684 1770 +
Chr1	stalkie_big_nohaplotig	exon	124904212	124904382	100	-	.	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 1513 1683 +
Chr1	stalkie_big_nohaplotig	exon	124904448	124904612	98	-	.	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 1348 1512 +
Chr1	stalkie_big_nohaplotig	exon	124904766	124904912	100	-	.	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 1201 1347 +
Chr1	stalkie_big_nohaplotig	exon	124904980	124905084	100	-	.	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 1096 1200 +
Chr1	stalkie_big_nohaplotig	exon	124905138	124905544	100	-	.	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 689 1095 +
Chr1	stalkie_big_nohaplotig	exon	124906455	124906620	100	-	.	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 523 688 +
Chr1	stalkie_big_nohaplotig	exon	124906901	124907212	99	-	.	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 211 522 +
Chr1	stalkie_big_nohaplotig	exon	124907273	124907480	99	-	.	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 3 210 +
Chr1	stalkie_big_nohaplotig	CDS	124900273	124901256	.	-	0	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 2164 3147 +
Chr1	stalkie_big_nohaplotig	CDS	124901322	124901645	.	-	0	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 1840 2163 +
Chr1	stalkie_big_nohaplotig	CDS	124901706	124901774	.	-	0	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 1771 1839 +
Chr1	stalkie_big_nohaplotig	CDS	124903336	124903422	.	-	0	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 1684 1770 +
Chr1	stalkie_big_nohaplotig	CDS	124904212	124904382	.	-	0	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 1513 1683 +
Chr1	stalkie_big_nohaplotig	CDS	124904448	124904612	.	-	0	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 1348 1512 +
Chr1	stalkie_big_nohaplotig	CDS	124904766	124904912	.	-	0	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 1201 1347 +
Chr1	stalkie_big_nohaplotig	CDS	124904980	124905084	.	-	0	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 1096 1200 +
Chr1	stalkie_big_nohaplotig	CDS	124905138	124905544	.	-	2	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 689 1095 +
Chr1	stalkie_big_nohaplotig	CDS	124906455	124906620	.	-	0	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 523 688 +
Chr1	stalkie_big_nohaplotig	CDS	124906901	124907212	.	-	0	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 211 522 +
Chr1	stalkie_big_nohaplotig	CDS	124907273	124907479	.	-	0	Parent=FBgn0033310.2.mrna1;Target=FBgn0033310.2 4 210 +
Chr1	gffcl	locus	124922998	124924182	.	-	.	ID=RLOC_00010868;geneIDs=FBgn0032010.2.path1;transcripts=FBgn0032010.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124922998	124924182	.	-	.	ID=FBgn0032010.2.mrna1;geneID=FBgn0032010.2.path1;Name=FBgn0032010.2;Dir=sensecoverage=100.0;identity=99.8;matches=847;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010868
Chr1	stalkie_big_nohaplotig	exon	124922998	124923123	99	-	.	Parent=FBgn0032010.2.mrna1;Target=FBgn0032010.2 724 849 +
Chr1	stalkie_big_nohaplotig	exon	124923187	124923440	100	-	.	Parent=FBgn0032010.2.mrna1;Target=FBgn0032010.2 470 723 +
Chr1	stalkie_big_nohaplotig	exon	124923591	124923893	99	-	.	Parent=FBgn0032010.2.mrna1;Target=FBgn0032010.2 167 469 +
Chr1	stalkie_big_nohaplotig	exon	124923947	124924094	100	-	.	Parent=FBgn0032010.2.mrna1;Target=FBgn0032010.2 19 166 +
Chr1	stalkie_big_nohaplotig	exon	124924165	124924182	100	-	.	Parent=FBgn0032010.2.mrna1;Target=FBgn0032010.2 1 18 +
Chr1	stalkie_big_nohaplotig	CDS	124922998	124923123	.	-	0	Parent=FBgn0032010.2.mrna1;Target=FBgn0032010.2 724 849 +
Chr1	stalkie_big_nohaplotig	CDS	124923187	124923440	.	-	2	Parent=FBgn0032010.2.mrna1;Target=FBgn0032010.2 470 723 +
Chr1	stalkie_big_nohaplotig	CDS	124923591	124923893	.	-	2	Parent=FBgn0032010.2.mrna1;Target=FBgn0032010.2 167 469 +
Chr1	stalkie_big_nohaplotig	CDS	124923947	124924094	.	-	0	Parent=FBgn0032010.2.mrna1;Target=FBgn0032010.2 19 166 +
Chr1	stalkie_big_nohaplotig	CDS	124924165	124924182	.	-	0	Parent=FBgn0032010.2.mrna1;Target=FBgn0032010.2 1 18 +
Chr1	gffcl	locus	124931526	124934263	.	+	.	ID=RLOC_00010869;geneIDs=FBgn0040262.2.path1;transcripts=FBgn0040262.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124931526	124934263	.	+	.	ID=FBgn0040262.2.mrna1;geneID=FBgn0040262.2.path1;Name=FBgn0040262.2;Dir=sensecoverage=100.0;identity=98.9;matches=1572;mismatches=18;indels=0;unknowns=0;locus=RLOC_00010869
Chr1	stalkie_big_nohaplotig	exon	124931526	124932211	99	+	.	Parent=FBgn0040262.2.mrna1;Target=FBgn0040262.2 1 686 +
Chr1	stalkie_big_nohaplotig	exon	124933360	124934263	98	+	.	Parent=FBgn0040262.2.mrna1;Target=FBgn0040262.2 687 1590 +
Chr1	stalkie_big_nohaplotig	CDS	124931526	124932211	.	+	0	Parent=FBgn0040262.2.mrna1;Target=FBgn0040262.2 1 686 +
Chr1	stalkie_big_nohaplotig	CDS	124933360	124934263	.	+	1	Parent=FBgn0040262.2.mrna1;Target=FBgn0040262.2 687 1590 +
Chr1	gffcl	locus	124977707	124978948	.	-	.	ID=RLOC_00010870;geneIDs=FBgn0032010.1.path1;transcripts=FBgn0032010.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	124977707	124978948	.	-	.	ID=FBgn0032010.1.mrna1;geneID=FBgn0032010.1.path1;Name=FBgn0032010.1;Dir=sensecoverage=100.0;identity=98.3;matches=870;mismatches=14;indels=1;unknowns=0;locus=RLOC_00010870
Chr1	stalkie_big_nohaplotig	exon	124977707	124977820	100	-	.	Parent=FBgn0032010.1.mrna1;Target=FBgn0032010.1 772 885 +
Chr1	stalkie_big_nohaplotig	exon	124977889	124978139	97	-	.	Parent=FBgn0032010.1.mrna1;Target=FBgn0032010.1 521 771 +
Chr1	stalkie_big_nohaplotig	exon	124978266	124978574	100	-	.	Parent=FBgn0032010.1.mrna1;Target=FBgn0032010.1 212 520 +
Chr1	stalkie_big_nohaplotig	exon	124978681	124978828	95	-	.	Parent=FBgn0032010.1.mrna1;Target=FBgn0032010.1 64 211 +
Chr1	stalkie_big_nohaplotig	exon	124978887	124978948	98	-	.	Parent=FBgn0032010.1.mrna1;Target=FBgn0032010.1 1 63 +
Chr1	stalkie_big_nohaplotig	CDS	124977707	124977820	.	-	0	Parent=FBgn0032010.1.mrna1;Target=FBgn0032010.1 772 885 +
Chr1	stalkie_big_nohaplotig	CDS	124977889	124978139	.	-	2	Parent=FBgn0032010.1.mrna1;Target=FBgn0032010.1 521 771 +
Chr1	stalkie_big_nohaplotig	CDS	124978266	124978574	.	-	2	Parent=FBgn0032010.1.mrna1;Target=FBgn0032010.1 212 520 +
Chr1	stalkie_big_nohaplotig	CDS	124978681	124978828	.	-	0	Parent=FBgn0032010.1.mrna1;Target=FBgn0032010.1 64 211 +
Chr1	stalkie_big_nohaplotig	CDS	124978887	124978889	.	-	0	Parent=FBgn0032010.1.mrna1;Target=FBgn0032010.1 61 63 +
Chr1	gffcl	locus	124995178	124996209	.	+	.	ID=RLOC_00010871;geneIDs=Dp_FBgn0244711.1.path4;transcripts=Dp_FBgn0244711.1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	124995178	124996209	.	+	.	ID=Dp_FBgn0244711.1.mrna4;geneID=Dp_FBgn0244711.1.path4;Name=Dp_FBgn0244711.1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1020;mismatches=12;indels=0;unknowns=0;Target=Dp_FBgn0244711.1 1032 1 .;locus=RLOC_00010871
Chr1	stalkie_big_nohaplotig	exon	124995178	124996209	98	+	.	Parent=Dp_FBgn0244711.1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	124995178	124996209	.	+	0	Parent=Dp_FBgn0244711.1.mrna4
Chr1	gffcl	locus	125026877	125028260	.	+	.	ID=RLOC_00010872;geneIDs=comp153011_c0_seq1.path1;transcripts=comp153011_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125026877	125028260	.	+	.	ID=comp153011_c0_seq1.mrna1;geneID=comp153011_c0_seq1.path1;Name=comp153011_c0_seq1;Dir=sensecoverage=100.0;identity=98.2;matches=745;mismatches=9;indels=5;unknowns=0;locus=RLOC_00010872
Chr1	stalkie_big_nohaplotig	exon	125026877	125026930	100	+	.	Parent=comp153011_c0_seq1.mrna1;Target=comp153011_c0_seq1 1 54 +
Chr1	stalkie_big_nohaplotig	exon	125026993	125027099	97	+	.	Parent=comp153011_c0_seq1.mrna1;Target=comp153011_c0_seq1 55 161 +
Chr1	stalkie_big_nohaplotig	exon	125027157	125027392	99	+	.	Parent=comp153011_c0_seq1.mrna1;Target=comp153011_c0_seq1 162 397 +
Chr1	stalkie_big_nohaplotig	exon	125027904	125028260	97	+	.	Parent=comp153011_c0_seq1.mrna1;Target=comp153011_c0_seq1 398 759 +
Chr1	stalkie_big_nohaplotig	CDS	125026877	125026930	.	+	0	Parent=comp153011_c0_seq1.mrna1;Target=comp153011_c0_seq1 1 54 +
Chr1	stalkie_big_nohaplotig	CDS	125026993	125027099	.	+	0	Parent=comp153011_c0_seq1.mrna1;Target=comp153011_c0_seq1 55 161 +
Chr1	stalkie_big_nohaplotig	CDS	125027157	125027370	.	+	1	Parent=comp153011_c0_seq1.mrna1;Target=comp153011_c0_seq1 162 375 +
Chr1	gffcl	locus	125112770	125113207	.	-	.	ID=RLOC_00010873;geneIDs=comp135951_c0_seq1.path1;transcripts=comp135951_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125112770	125113207	.	-	.	ID=comp135951_c0_seq1.mrna1;geneID=comp135951_c0_seq1.path1;Name=comp135951_c0_seq1;Dir=antisensecoverage=96.0;identity=99.7;matches=358;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010873
Chr1	stalkie_big_nohaplotig	exon	125112770	125113027	99	-	.	Parent=comp135951_c0_seq1.mrna1;Target=comp135951_c0_seq1 1 258 -
Chr1	stalkie_big_nohaplotig	exon	125113107	125113207	100	-	.	Parent=comp135951_c0_seq1.mrna1;Target=comp135951_c0_seq1 259 359 -
Chr1	stalkie_big_nohaplotig	CDS	125112770	125113027	.	-	0	Parent=comp135951_c0_seq1.mrna1;Target=comp135951_c0_seq1 1 258 .
Chr1	stalkie_big_nohaplotig	CDS	125113107	125113145	.	-	0	Parent=comp135951_c0_seq1.mrna1;Target=comp135951_c0_seq1 259 297 .
Chr1	gffcl	locus	125240670	125279496	.	-	.	ID=RLOC_00010874;geneIDs=FBgn0052732.1.path1,comp153926_c0_seq1.path1;transcripts=FBgn0052732.1.mrna1,comp153926_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125240670	125279496	.	-	.	ID=FBgn0052732.1.mrna1;geneID=FBgn0052732.1.path1;Name=FBgn0052732.1;Dir=sensecoverage=100.0;identity=99.9;matches=1547;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010874
Chr1	stalkie_big_nohaplotig	exon	125240670	125241159	100	-	.	Parent=FBgn0052732.1.mrna1;Target=FBgn0052732.1 1059 1548 +
Chr1	stalkie_big_nohaplotig	exon	125241222	125241485	100	-	.	Parent=FBgn0052732.1.mrna1;Target=FBgn0052732.1 795 1058 +
Chr1	stalkie_big_nohaplotig	exon	125278703	125279496	99	-	.	Parent=FBgn0052732.1.mrna1;Target=FBgn0052732.1 1 794 +
Chr1	stalkie_big_nohaplotig	CDS	125240670	125241159	.	-	1	Parent=FBgn0052732.1.mrna1;Target=FBgn0052732.1 1059 1548 +
Chr1	stalkie_big_nohaplotig	CDS	125241222	125241485	.	-	1	Parent=FBgn0052732.1.mrna1;Target=FBgn0052732.1 795 1058 +
Chr1	stalkie_big_nohaplotig	CDS	125278703	125279496	.	-	0	Parent=FBgn0052732.1.mrna1;Target=FBgn0052732.1 1 794 +
Chr1	stalkie_big_nohaplotig	mRNA	125277202	125278726	.	-	.	ID=comp153926_c0_seq1.mrna1;geneID=comp153926_c0_seq1.path1;Name=comp153926_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1523;mismatches=2;indels=0;unknowns=0;Target=comp153926_c0_seq1 1525 1 .;CDS_Target=comp153926_c0_seq1 665 525 .;locus=RLOC_00010874
Chr1	stalkie_big_nohaplotig	exon	125277202	125278726	99	-	.	Parent=comp153926_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	125278062	125278202	.	-	0	Parent=comp153926_c0_seq1.mrna1
Chr1	gffcl	locus	125279849	125281083	.	+	.	ID=RLOC_00010876;geneIDs=FBgn0040373.5.path1;transcripts=FBgn0040373.5.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125279849	125281083	.	+	.	ID=FBgn0040373.5.mrna1;geneID=FBgn0040373.5.path1;Name=FBgn0040373.5;Dir=sensecoverage=99.8;identity=99.7;matches=1174;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010876
Chr1	stalkie_big_nohaplotig	exon	125279849	125280125	99	+	.	Parent=FBgn0040373.5.mrna1;Target=FBgn0040373.5 1 277 +
Chr1	stalkie_big_nohaplotig	exon	125280184	125281083	99	+	.	Parent=FBgn0040373.5.mrna1;Target=FBgn0040373.5 278 1177 +
Chr1	stalkie_big_nohaplotig	CDS	125279849	125280125	.	+	0	Parent=FBgn0040373.5.mrna1;Target=FBgn0040373.5 1 277 +
Chr1	stalkie_big_nohaplotig	CDS	125280184	125281082	.	+	2	Parent=FBgn0040373.5.mrna1;Target=FBgn0040373.5 278 1176 +
Chr1	gffcl	locus	125281421	125282281	.	-	.	ID=RLOC_00010877;geneIDs=comp157623_c0_seq1.path1;transcripts=comp157623_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125281421	125282281	.	-	.	ID=comp157623_c0_seq1.mrna1;geneID=comp157623_c0_seq1.path1;Name=comp157623_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.3;matches=857;mismatches=4;indels=29;unknowns=0;Target=comp157623_c0_seq1 890 1 .;CDS_Target=comp157623_c0_seq1 161 78 .;locus=RLOC_00010877
Chr1	stalkie_big_nohaplotig	exon	125281421	125282281	96	-	.	Parent=comp157623_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	125282121	125282204	.	-	0	Parent=comp157623_c0_seq1.mrna1
Chr1	gffcl	locus	125285671	125285985	.	+	.	ID=RLOC_00010878;geneIDs=FBgn0259722.1.path1;transcripts=FBgn0259722.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125285671	125285985	.	+	.	ID=FBgn0259722.1.mrna1;geneID=FBgn0259722.1.path1;Name=FBgn0259722.1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=310;mismatches=5;indels=0;unknowns=0;Target=FBgn0259722.1 315 1 .;locus=RLOC_00010878
Chr1	stalkie_big_nohaplotig	exon	125285671	125285985	98	+	.	Parent=FBgn0259722.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	125285671	125285985	.	+	0	Parent=FBgn0259722.1.mrna1
Chr1	gffcl	locus	125286081	125286603	.	-	.	ID=RLOC_00010879;geneIDs=FBgn0051950.1.path1;transcripts=FBgn0051950.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125286081	125286603	.	-	.	ID=FBgn0051950.1.mrna1;geneID=FBgn0051950.1.path1;Name=FBgn0051950.1;Dir=sensecoverage=100.0;identity=99.8;matches=455;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010879
Chr1	stalkie_big_nohaplotig	exon	125286081	125286482	99	-	.	Parent=FBgn0051950.1.mrna1;Target=FBgn0051950.1 55 456 +
Chr1	stalkie_big_nohaplotig	exon	125286550	125286603	100	-	.	Parent=FBgn0051950.1.mrna1;Target=FBgn0051950.1 1 54 +
Chr1	stalkie_big_nohaplotig	CDS	125286081	125286482	.	-	0	Parent=FBgn0051950.1.mrna1;Target=FBgn0051950.1 55 456 +
Chr1	stalkie_big_nohaplotig	CDS	125286550	125286603	.	-	0	Parent=FBgn0051950.1.mrna1;Target=FBgn0051950.1 1 54 +
Chr1	gffcl	locus	125288479	125290943	.	+	.	ID=RLOC_00010880;geneIDs=FBgn0000316.1.path1;transcripts=FBgn0000316.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125288479	125290943	.	+	.	ID=FBgn0000316.1.mrna1;geneID=FBgn0000316.1.path1;Name=FBgn0000316.1;Dir=sensecoverage=99.8;identity=99.6;matches=1850;mismatches=7;indels=0;unknowns=0;locus=RLOC_00010880
Chr1	stalkie_big_nohaplotig	exon	125288479	125288515	100	+	.	Parent=FBgn0000316.1.mrna1;Target=FBgn0000316.1 4 40 +
Chr1	stalkie_big_nohaplotig	exon	125288571	125289367	100	+	.	Parent=FBgn0000316.1.mrna1;Target=FBgn0000316.1 41 837 +
Chr1	stalkie_big_nohaplotig	exon	125289432	125289619	99	+	.	Parent=FBgn0000316.1.mrna1;Target=FBgn0000316.1 838 1025 +
Chr1	stalkie_big_nohaplotig	exon	125289866	125290135	98	+	.	Parent=FBgn0000316.1.mrna1;Target=FBgn0000316.1 1026 1295 +
Chr1	stalkie_big_nohaplotig	exon	125290197	125290355	100	+	.	Parent=FBgn0000316.1.mrna1;Target=FBgn0000316.1 1296 1454 +
Chr1	stalkie_big_nohaplotig	exon	125290413	125290575	98	+	.	Parent=FBgn0000316.1.mrna1;Target=FBgn0000316.1 1455 1617 +
Chr1	stalkie_big_nohaplotig	exon	125290635	125290736	100	+	.	Parent=FBgn0000316.1.mrna1;Target=FBgn0000316.1 1618 1719 +
Chr1	stalkie_big_nohaplotig	exon	125290803	125290943	99	+	.	Parent=FBgn0000316.1.mrna1;Target=FBgn0000316.1 1720 1860 +
Chr1	stalkie_big_nohaplotig	CDS	125288479	125288515	.	+	0	Parent=FBgn0000316.1.mrna1;Target=FBgn0000316.1 4 40 +
Chr1	stalkie_big_nohaplotig	CDS	125288571	125289367	.	+	2	Parent=FBgn0000316.1.mrna1;Target=FBgn0000316.1 41 837 +
Chr1	stalkie_big_nohaplotig	CDS	125289432	125289619	.	+	0	Parent=FBgn0000316.1.mrna1;Target=FBgn0000316.1 838 1025 +
Chr1	stalkie_big_nohaplotig	CDS	125289866	125290135	.	+	1	Parent=FBgn0000316.1.mrna1;Target=FBgn0000316.1 1026 1295 +
Chr1	stalkie_big_nohaplotig	CDS	125290197	125290355	.	+	1	Parent=FBgn0000316.1.mrna1;Target=FBgn0000316.1 1296 1454 +
Chr1	stalkie_big_nohaplotig	CDS	125290413	125290575	.	+	1	Parent=FBgn0000316.1.mrna1;Target=FBgn0000316.1 1455 1617 +
Chr1	stalkie_big_nohaplotig	CDS	125290635	125290736	.	+	0	Parent=FBgn0000316.1.mrna1;Target=FBgn0000316.1 1618 1719 +
Chr1	stalkie_big_nohaplotig	CDS	125290803	125290943	.	+	0	Parent=FBgn0000316.1.mrna1;Target=FBgn0000316.1 1720 1860 +
Chr1	gffcl	locus	125293246	125294400	.	-	.	ID=RLOC_00010881;geneIDs=FBgn0261446.1.path1;transcripts=FBgn0261446.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125293246	125294400	.	-	.	ID=FBgn0261446.1.mrna1;geneID=FBgn0261446.1.path1;Name=FBgn0261446.1;Dir=sensecoverage=99.7;identity=99.5;matches=970;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010881
Chr1	stalkie_big_nohaplotig	exon	125293246	125293460	100	-	.	Parent=FBgn0261446.1.mrna1;Target=FBgn0261446.1 764 978 +
Chr1	stalkie_big_nohaplotig	exon	125293641	125294400	99	-	.	Parent=FBgn0261446.1.mrna1;Target=FBgn0261446.1 4 763 +
Chr1	stalkie_big_nohaplotig	CDS	125293246	125293460	.	-	2	Parent=FBgn0261446.1.mrna1;Target=FBgn0261446.1 764 978 +
Chr1	stalkie_big_nohaplotig	CDS	125293641	125294400	.	-	0	Parent=FBgn0261446.1.mrna1;Target=FBgn0261446.1 4 763 +
Chr1	gffcl	locus	125345822	125466038	.	.	.	ID=RLOC_00010882;geneIDs=comp150706_c0_seq1.path1,comp150706_c0_seq1.path2;transcripts=comp150706_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125345822	125466038	.	-	.	ID=comp150706_c0_seq1.mrna1;geneID=comp150706_c0_seq1.path1;Name=comp150706_c0_seq1;Dir=indeterminatecoverage=60.8;identity=97.0;matches=777;mismatches=16;indels=8;unknowns=0;locus=RLOC_00010882
Chr1	stalkie_big_nohaplotig	exon	125345822	125345823	100	-	.	Parent=comp150706_c0_seq1.mrna1;Target=comp150706_c0_seq1 801 800 .
Chr1	stalkie_big_nohaplotig	exon	125346208	125346213	100	-	.	Parent=comp150706_c0_seq1.mrna1;Target=comp150706_c0_seq1 799 794 .
Chr1	stalkie_big_nohaplotig	exon	125347125	125347128	100	-	.	Parent=comp150706_c0_seq1.mrna1;Target=comp150706_c0_seq1 793 790 .
Chr1	stalkie_big_nohaplotig	exon	125351759	125351766	100	-	.	Parent=comp150706_c0_seq1.mrna1;Target=comp150706_c0_seq1 789 782 .
Chr1	stalkie_big_nohaplotig	exon	125355673	125355676	100	-	.	Parent=comp150706_c0_seq1.mrna1;Target=comp150706_c0_seq1 781 778 .
Chr1	stalkie_big_nohaplotig	exon	125356222	125356227	100	-	.	Parent=comp150706_c0_seq1.mrna1;Target=comp150706_c0_seq1 777 772 .
Chr1	stalkie_big_nohaplotig	exon	125367909	125367917	88	-	.	Parent=comp150706_c0_seq1.mrna1;Target=comp150706_c0_seq1 771 763 .
Chr1	stalkie_big_nohaplotig	exon	125376070	125376071	100	-	.	Parent=comp150706_c0_seq1.mrna1;Target=comp150706_c0_seq1 762 761 .
Chr1	stalkie_big_nohaplotig	exon	125396695	125396700	83	-	.	Parent=comp150706_c0_seq1.mrna1;Target=comp150706_c0_seq1 760 755 .
Chr1	stalkie_big_nohaplotig	exon	125420177	125420188	91	-	.	Parent=comp150706_c0_seq1.mrna1;Target=comp150706_c0_seq1 754 743 .
Chr1	stalkie_big_nohaplotig	exon	125421489	125421495	100	-	.	Parent=comp150706_c0_seq1.mrna1;Target=comp150706_c0_seq1 742 736 .
Chr1	stalkie_big_nohaplotig	exon	125436179	125436186	100	-	.	Parent=comp150706_c0_seq1.mrna1;Target=comp150706_c0_seq1 735 728 .
Chr1	stalkie_big_nohaplotig	exon	125436631	125436635	100	-	.	Parent=comp150706_c0_seq1.mrna1;Target=comp150706_c0_seq1 727 723 .
Chr1	stalkie_big_nohaplotig	exon	125442546	125442550	100	-	.	Parent=comp150706_c0_seq1.mrna1;Target=comp150706_c0_seq1 722 718 .
Chr1	stalkie_big_nohaplotig	exon	125447552	125447554	100	-	.	Parent=comp150706_c0_seq1.mrna1;Target=comp150706_c0_seq1 717 715 .
Chr1	stalkie_big_nohaplotig	exon	125448287	125448297	100	-	.	Parent=comp150706_c0_seq1.mrna1;Target=comp150706_c0_seq1 714 704 .
Chr1	stalkie_big_nohaplotig	exon	125457971	125457987	66	-	.	Parent=comp150706_c0_seq1.mrna1;Target=comp150706_c0_seq1 703 683 .
Chr1	stalkie_big_nohaplotig	exon	125465361	125466038	97	-	.	Parent=comp150706_c0_seq1.mrna1;Target=comp150706_c0_seq1 682 1 .
Chr1	stalkie_big_nohaplotig	CDS	125465869	125465913	.	-	0	Parent=comp150706_c0_seq1.mrna1
Chr1	gffcl	locus	125347218	125349325	.	+	.	ID=RLOC_00010883;geneIDs=FBgn0039942.1.path1;transcripts=FBgn0039942.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125347218	125349325	.	+	.	ID=FBgn0039942.1.mrna1;geneID=FBgn0039942.1.path1;Name=FBgn0039942.1;Dir=sensecoverage=100.0;identity=99.4;matches=358;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010883
Chr1	stalkie_big_nohaplotig	exon	125347218	125347337	98	+	.	Parent=FBgn0039942.1.mrna1;Target=FBgn0039942.1 1 120 +
Chr1	stalkie_big_nohaplotig	exon	125347393	125347479	100	+	.	Parent=FBgn0039942.1.mrna1;Target=FBgn0039942.1 121 207 +
Chr1	stalkie_big_nohaplotig	exon	125349173	125349325	100	+	.	Parent=FBgn0039942.1.mrna1;Target=FBgn0039942.1 208 360 +
Chr1	stalkie_big_nohaplotig	CDS	125347218	125347337	.	+	0	Parent=FBgn0039942.1.mrna1;Target=FBgn0039942.1 1 120 +
Chr1	stalkie_big_nohaplotig	CDS	125347393	125347479	.	+	0	Parent=FBgn0039942.1.mrna1;Target=FBgn0039942.1 121 207 +
Chr1	stalkie_big_nohaplotig	CDS	125349173	125349325	.	+	0	Parent=FBgn0039942.1.mrna1;Target=FBgn0039942.1 208 360 +
Chr1	gffcl	locus	125350593	125358910	.	-	.	ID=RLOC_00010884;geneIDs=FBgn0039941.1.path1;transcripts=FBgn0039941.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125350593	125358910	.	-	.	ID=FBgn0039941.1.mrna1;geneID=FBgn0039941.1.path1;Name=FBgn0039941.1;Dir=sensecoverage=100.0;identity=98.9;matches=1554;mismatches=18;indels=0;unknowns=0;locus=RLOC_00010884
Chr1	stalkie_big_nohaplotig	exon	125350593	125350912	98	-	.	Parent=FBgn0039941.1.mrna1;Target=FBgn0039941.1 1253 1572 +
Chr1	stalkie_big_nohaplotig	exon	125350976	125351077	96	-	.	Parent=FBgn0039941.1.mrna1;Target=FBgn0039941.1 1151 1252 +
Chr1	stalkie_big_nohaplotig	exon	125352286	125352519	98	-	.	Parent=FBgn0039941.1.mrna1;Target=FBgn0039941.1 917 1150 +
Chr1	stalkie_big_nohaplotig	exon	125352608	125352754	99	-	.	Parent=FBgn0039941.1.mrna1;Target=FBgn0039941.1 770 916 +
Chr1	stalkie_big_nohaplotig	exon	125352827	125353058	98	-	.	Parent=FBgn0039941.1.mrna1;Target=FBgn0039941.1 538 769 +
Chr1	stalkie_big_nohaplotig	exon	125353127	125353434	100	-	.	Parent=FBgn0039941.1.mrna1;Target=FBgn0039941.1 230 537 +
Chr1	stalkie_big_nohaplotig	exon	125354130	125354255	99	-	.	Parent=FBgn0039941.1.mrna1;Target=FBgn0039941.1 104 229 +
Chr1	stalkie_big_nohaplotig	exon	125358808	125358910	99	-	.	Parent=FBgn0039941.1.mrna1;Target=FBgn0039941.1 1 103 +
Chr1	stalkie_big_nohaplotig	CDS	125350593	125350912	.	-	2	Parent=FBgn0039941.1.mrna1;Target=FBgn0039941.1 1253 1572 +
Chr1	stalkie_big_nohaplotig	CDS	125350976	125351077	.	-	2	Parent=FBgn0039941.1.mrna1;Target=FBgn0039941.1 1151 1252 +
Chr1	stalkie_big_nohaplotig	CDS	125352286	125352519	.	-	2	Parent=FBgn0039941.1.mrna1;Target=FBgn0039941.1 917 1150 +
Chr1	stalkie_big_nohaplotig	CDS	125352608	125352754	.	-	2	Parent=FBgn0039941.1.mrna1;Target=FBgn0039941.1 770 916 +
Chr1	stalkie_big_nohaplotig	CDS	125352827	125353058	.	-	0	Parent=FBgn0039941.1.mrna1;Target=FBgn0039941.1 538 769 +
Chr1	stalkie_big_nohaplotig	CDS	125353127	125353434	.	-	2	Parent=FBgn0039941.1.mrna1;Target=FBgn0039941.1 230 537 +
Chr1	stalkie_big_nohaplotig	CDS	125354130	125354255	.	-	2	Parent=FBgn0039941.1.mrna1;Target=FBgn0039941.1 104 229 +
Chr1	stalkie_big_nohaplotig	CDS	125358808	125358910	.	-	0	Parent=FBgn0039941.1.mrna1;Target=FBgn0039941.1 1 103 +
Chr1	gffcl	locus	125386064	125392957	.	-	.	ID=RLOC_00010885;geneIDs=FBgn0039941.2.path2;transcripts=FBgn0039941.2.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	125386064	125392957	.	-	.	ID=FBgn0039941.2.mrna2;geneID=FBgn0039941.2.path2;Name=FBgn0039941.2;Dir=sensecoverage=93.2;identity=99.2;matches=1446;mismatches=8;indels=3;unknowns=0;locus=RLOC_00010885
Chr1	stalkie_big_nohaplotig	exon	125386064	125386365	100	-	.	Parent=FBgn0039941.2.mrna2;Target=FBgn0039941.2 1262 1563 +
Chr1	stalkie_big_nohaplotig	exon	125386436	125386537	99	-	.	Parent=FBgn0039941.2.mrna2;Target=FBgn0039941.2 1160 1261 +
Chr1	stalkie_big_nohaplotig	exon	125387789	125388025	99	-	.	Parent=FBgn0039941.2.mrna2;Target=FBgn0039941.2 923 1159 +
Chr1	stalkie_big_nohaplotig	exon	125388102	125388248	100	-	.	Parent=FBgn0039941.2.mrna2;Target=FBgn0039941.2 776 922 +
Chr1	stalkie_big_nohaplotig	exon	125388314	125388545	100	-	.	Parent=FBgn0039941.2.mrna2;Target=FBgn0039941.2 544 775 +
Chr1	stalkie_big_nohaplotig	exon	125388622	125388929	99	-	.	Parent=FBgn0039941.2.mrna2;Target=FBgn0039941.2 236 543 +
Chr1	stalkie_big_nohaplotig	exon	125392832	125392957	93	-	.	Parent=FBgn0039941.2.mrna2;Target=FBgn0039941.2 107 235 +
Chr1	stalkie_big_nohaplotig	CDS	125386064	125386365	.	-	1	Parent=FBgn0039941.2.mrna2;Target=FBgn0039941.2 1262 1563 +
Chr1	stalkie_big_nohaplotig	CDS	125386436	125386537	.	-	1	Parent=FBgn0039941.2.mrna2;Target=FBgn0039941.2 1160 1261 +
Chr1	stalkie_big_nohaplotig	CDS	125387789	125388025	.	-	1	Parent=FBgn0039941.2.mrna2;Target=FBgn0039941.2 923 1159 +
Chr1	stalkie_big_nohaplotig	CDS	125388102	125388248	.	-	1	Parent=FBgn0039941.2.mrna2;Target=FBgn0039941.2 776 922 +
Chr1	stalkie_big_nohaplotig	CDS	125388314	125388545	.	-	2	Parent=FBgn0039941.2.mrna2;Target=FBgn0039941.2 544 775 +
Chr1	stalkie_big_nohaplotig	CDS	125388622	125388929	.	-	1	Parent=FBgn0039941.2.mrna2;Target=FBgn0039941.2 236 543 +
Chr1	stalkie_big_nohaplotig	CDS	125392832	125392957	.	-	1	Parent=FBgn0039941.2.mrna2;Target=FBgn0039941.2 107 235 +
Chr1	gffcl	locus	125405291	125409398	.	-	.	ID=RLOC_00010886;geneIDs=comp158068_c0_seq1.path1;transcripts=comp158068_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125405291	125409398	.	-	.	ID=comp158068_c0_seq1.mrna1;geneID=comp158068_c0_seq1.path1;Name=comp158068_c0_seq1;Dir=antisensecoverage=100.0;identity=96.5;matches=553;mismatches=7;indels=13;unknowns=0;Target=comp158068_c0_seq1 490 570 .;locus=RLOC_00010886
Chr1	stalkie_big_nohaplotig	exon	125405291	125405758	96	-	.	Parent=comp158068_c0_seq1.mrna1;Target=comp158068_c0_seq1 1 480 -
Chr1	stalkie_big_nohaplotig	exon	125409306	125409398	98	-	.	Parent=comp158068_c0_seq1.mrna1;Target=comp158068_c0_seq1 481 572 -
Chr1	stalkie_big_nohaplotig	CDS	125409315	125409396	.	-	0	Parent=comp158068_c0_seq1.mrna1
Chr1	gffcl	locus	125437005	125441224	.	+	.	ID=RLOC_00010887;geneIDs=FBgn0003159.1.path1;transcripts=FBgn0003159.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125437005	125441224	.	+	.	ID=FBgn0003159.1.mrna1;geneID=FBgn0003159.1.path1;Name=FBgn0003159.1;Dir=sensecoverage=100.0;identity=99.5;matches=4063;mismatches=20;indels=0;unknowns=0;locus=RLOC_00010887
Chr1	stalkie_big_nohaplotig	exon	125437005	125437068	100	+	.	Parent=FBgn0003159.1.mrna1;Target=FBgn0003159.1 1 64 +
Chr1	stalkie_big_nohaplotig	exon	125437138	125437422	100	+	.	Parent=FBgn0003159.1.mrna1;Target=FBgn0003159.1 65 349 +
Chr1	stalkie_big_nohaplotig	exon	125437491	125441224	99	+	.	Parent=FBgn0003159.1.mrna1;Target=FBgn0003159.1 350 4083 +
Chr1	stalkie_big_nohaplotig	CDS	125437005	125437068	.	+	0	Parent=FBgn0003159.1.mrna1;Target=FBgn0003159.1 1 64 +
Chr1	stalkie_big_nohaplotig	CDS	125437138	125437422	.	+	2	Parent=FBgn0003159.1.mrna1;Target=FBgn0003159.1 65 349 +
Chr1	stalkie_big_nohaplotig	CDS	125437491	125441224	.	+	2	Parent=FBgn0003159.1.mrna1;Target=FBgn0003159.1 350 4083 +
Chr1	gffcl	locus	125443485	125443735	.	-	.	ID=RLOC_00010888;geneIDs=comp142252_c0_seq1.path1;transcripts=comp142252_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125443485	125443735	.	-	.	ID=comp142252_c0_seq1.mrna1;geneID=comp142252_c0_seq1.path1;Name=comp142252_c0_seq1;Dir=indeterminatecoverage=99.2;identity=93.6;matches=235;mismatches=11;indels=5;unknowns=0;Target=comp142252_c0_seq1 247 2 .;CDS_Target=comp142252_c0_seq1 243 85 .;locus=RLOC_00010888
Chr1	stalkie_big_nohaplotig	exon	125443485	125443735	93	-	.	Parent=comp142252_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	125443489	125443652	.	-	0	Parent=comp142252_c0_seq1.mrna1
Chr1	gffcl	locus	125443873	125445494	.	-	.	ID=RLOC_00010889;geneIDs=FBgn0019957.1.path1;transcripts=FBgn0019957.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125443873	125445494	.	-	.	ID=FBgn0019957.1.mrna1;geneID=FBgn0019957.1.path1;Name=FBgn0019957.1;Dir=sensecoverage=100.0;identity=100.0;matches=1251;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010889
Chr1	stalkie_big_nohaplotig	exon	125443873	125443965	100	-	.	Parent=FBgn0019957.1.mrna1;Target=FBgn0019957.1 1159 1251 +
Chr1	stalkie_big_nohaplotig	exon	125444039	125444437	100	-	.	Parent=FBgn0019957.1.mrna1;Target=FBgn0019957.1 760 1158 +
Chr1	stalkie_big_nohaplotig	exon	125444504	125445227	100	-	.	Parent=FBgn0019957.1.mrna1;Target=FBgn0019957.1 36 759 +
Chr1	stalkie_big_nohaplotig	exon	125445460	125445494	100	-	.	Parent=FBgn0019957.1.mrna1;Target=FBgn0019957.1 1 35 +
Chr1	stalkie_big_nohaplotig	CDS	125443873	125443965	.	-	0	Parent=FBgn0019957.1.mrna1;Target=FBgn0019957.1 1159 1251 +
Chr1	stalkie_big_nohaplotig	CDS	125444039	125444437	.	-	0	Parent=FBgn0019957.1.mrna1;Target=FBgn0019957.1 760 1158 +
Chr1	stalkie_big_nohaplotig	CDS	125444504	125445227	.	-	1	Parent=FBgn0019957.1.mrna1;Target=FBgn0019957.1 36 759 +
Chr1	stalkie_big_nohaplotig	CDS	125445460	125445494	.	-	0	Parent=FBgn0019957.1.mrna1;Target=FBgn0019957.1 1 35 +
Chr1	gffcl	locus	125447983	125449449	.	+	.	ID=RLOC_00010890;geneIDs=FBgn0026565.1.path1;transcripts=FBgn0026565.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125447983	125449449	.	+	.	ID=FBgn0026565.1.mrna1;geneID=FBgn0026565.1.path1;Name=FBgn0026565.1;Dir=sensecoverage=100.0;identity=99.8;matches=1254;mismatches=3;indels=0;unknowns=0;locus=RLOC_00010890
Chr1	stalkie_big_nohaplotig	exon	125447983	125448064	100	+	.	Parent=FBgn0026565.1.mrna1;Target=FBgn0026565.1 1 82 +
Chr1	stalkie_big_nohaplotig	exon	125448158	125448249	100	+	.	Parent=FBgn0026565.1.mrna1;Target=FBgn0026565.1 83 174 +
Chr1	stalkie_big_nohaplotig	exon	125448307	125448552	99	+	.	Parent=FBgn0026565.1.mrna1;Target=FBgn0026565.1 175 420 +
Chr1	stalkie_big_nohaplotig	exon	125448613	125449449	99	+	.	Parent=FBgn0026565.1.mrna1;Target=FBgn0026565.1 421 1257 +
Chr1	stalkie_big_nohaplotig	CDS	125447983	125448064	.	+	0	Parent=FBgn0026565.1.mrna1;Target=FBgn0026565.1 1 82 +
Chr1	stalkie_big_nohaplotig	CDS	125448158	125448249	.	+	2	Parent=FBgn0026565.1.mrna1;Target=FBgn0026565.1 83 174 +
Chr1	stalkie_big_nohaplotig	CDS	125448307	125448552	.	+	0	Parent=FBgn0026565.1.mrna1;Target=FBgn0026565.1 175 420 +
Chr1	stalkie_big_nohaplotig	CDS	125448613	125449449	.	+	0	Parent=FBgn0026565.1.mrna1;Target=FBgn0026565.1 421 1257 +
Chr1	gffcl	locus	125450921	125464087	.	.	.	ID=RLOC_00010891;geneIDs=FBgn0004574.1.path1,comp116618_c0_seq1.path1;transcripts=FBgn0004574.1.mrna1,comp116618_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125450921	125464087	.	+	.	ID=FBgn0004574.1.mrna1;geneID=FBgn0004574.1.path1;Name=FBgn0004574.1;Dir=sensecoverage=100.0;identity=99.9;matches=1807;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010891
Chr1	stalkie_big_nohaplotig	exon	125450921	125450966	100	+	.	Parent=FBgn0004574.1.mrna1;Target=FBgn0004574.1 1 46 +
Chr1	stalkie_big_nohaplotig	exon	125455386	125455559	100	+	.	Parent=FBgn0004574.1.mrna1;Target=FBgn0004574.1 47 220 +
Chr1	stalkie_big_nohaplotig	exon	125455851	125456006	99	+	.	Parent=FBgn0004574.1.mrna1;Target=FBgn0004574.1 221 376 +
Chr1	stalkie_big_nohaplotig	exon	125457515	125457618	100	+	.	Parent=FBgn0004574.1.mrna1;Target=FBgn0004574.1 377 480 +
Chr1	stalkie_big_nohaplotig	exon	125460108	125460627	99	+	.	Parent=FBgn0004574.1.mrna1;Target=FBgn0004574.1 481 1000 +
Chr1	stalkie_big_nohaplotig	exon	125460776	125460897	100	+	.	Parent=FBgn0004574.1.mrna1;Target=FBgn0004574.1 1001 1122 +
Chr1	stalkie_big_nohaplotig	exon	125461666	125461779	100	+	.	Parent=FBgn0004574.1.mrna1;Target=FBgn0004574.1 1123 1236 +
Chr1	stalkie_big_nohaplotig	exon	125461869	125462036	100	+	.	Parent=FBgn0004574.1.mrna1;Target=FBgn0004574.1 1237 1404 +
Chr1	stalkie_big_nohaplotig	exon	125462100	125462284	100	+	.	Parent=FBgn0004574.1.mrna1;Target=FBgn0004574.1 1405 1589 +
Chr1	stalkie_big_nohaplotig	exon	125463868	125464087	100	+	.	Parent=FBgn0004574.1.mrna1;Target=FBgn0004574.1 1590 1809 +
Chr1	stalkie_big_nohaplotig	CDS	125450921	125450966	.	+	0	Parent=FBgn0004574.1.mrna1;Target=FBgn0004574.1 1 46 +
Chr1	stalkie_big_nohaplotig	CDS	125455386	125455559	.	+	2	Parent=FBgn0004574.1.mrna1;Target=FBgn0004574.1 47 220 +
Chr1	stalkie_big_nohaplotig	CDS	125455851	125456006	.	+	2	Parent=FBgn0004574.1.mrna1;Target=FBgn0004574.1 221 376 +
Chr1	stalkie_big_nohaplotig	CDS	125457515	125457618	.	+	2	Parent=FBgn0004574.1.mrna1;Target=FBgn0004574.1 377 480 +
Chr1	stalkie_big_nohaplotig	CDS	125460108	125460627	.	+	0	Parent=FBgn0004574.1.mrna1;Target=FBgn0004574.1 481 1000 +
Chr1	stalkie_big_nohaplotig	CDS	125460776	125460897	.	+	2	Parent=FBgn0004574.1.mrna1;Target=FBgn0004574.1 1001 1122 +
Chr1	stalkie_big_nohaplotig	CDS	125461666	125461779	.	+	0	Parent=FBgn0004574.1.mrna1;Target=FBgn0004574.1 1123 1236 +
Chr1	stalkie_big_nohaplotig	CDS	125461869	125462036	.	+	0	Parent=FBgn0004574.1.mrna1;Target=FBgn0004574.1 1237 1404 +
Chr1	stalkie_big_nohaplotig	CDS	125462100	125462284	.	+	0	Parent=FBgn0004574.1.mrna1;Target=FBgn0004574.1 1405 1589 +
Chr1	stalkie_big_nohaplotig	CDS	125463868	125464087	.	+	1	Parent=FBgn0004574.1.mrna1;Target=FBgn0004574.1 1590 1809 +
Chr1	stalkie_big_nohaplotig	mRNA	125459863	125460154	.	-	.	ID=comp116618_c0_seq1.mrna1;geneID=comp116618_c0_seq1.path1;Name=comp116618_c0_seq1;Dir=indeterminatecoverage=97.0;identity=99.7;matches=291;mismatches=1;indels=0;unknowns=0;Target=comp116618_c0_seq1 292 1 .;CDS_Target=comp116618_c0_seq1 119 3 .;locus=RLOC_00010891
Chr1	stalkie_big_nohaplotig	exon	125459863	125460154	99	-	.	Parent=comp116618_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	125460036	125460152	.	-	0	Parent=comp116618_c0_seq1.mrna1
Chr1	gffcl	locus	125458083	125459583	.	-	.	ID=RLOC_00010892;geneIDs=comp162367_c0_seq1.path1;transcripts=comp162367_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125458083	125459583	.	-	.	ID=comp162367_c0_seq1.mrna1;geneID=comp162367_c0_seq1.path1;Name=comp162367_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.2;matches=1456;mismatches=37;indels=87;unknowns=0;Target=comp162367_c0_seq1 1572 1 .;CDS_Target=comp162367_c0_seq1 427 266 .;locus=RLOC_00010892
Chr1	stalkie_big_nohaplotig	exon	125458083	125459583	92	-	.	Parent=comp162367_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	125459155	125459315	.	-	0	Parent=comp162367_c0_seq1.mrna1
Chr1	gffcl	locus	125466052	125468574	.	-	.	ID=RLOC_00010893;geneIDs=comp161769_c0_seq1.path1;transcripts=comp161769_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125466052	125468574	.	-	.	ID=comp161769_c0_seq1.mrna1;geneID=comp161769_c0_seq1.path1;Name=comp161769_c0_seq1;Dir=sensecoverage=100.0;identity=97.4;matches=2224;mismatches=45;indels=15;unknowns=0;Target=comp161769_c0_seq1 1638 1787 +;locus=RLOC_00010893
Chr1	stalkie_big_nohaplotig	exon	125466052	125467422	95	-	.	Parent=comp161769_c0_seq1.mrna1;Target=comp161769_c0_seq1 901 2282 +
Chr1	stalkie_big_nohaplotig	exon	125467675	125468574	99	-	.	Parent=comp161769_c0_seq1.mrna1;Target=comp161769_c0_seq1 1 900 +
Chr1	stalkie_big_nohaplotig	CDS	125466544	125466685	.	-	0	Parent=comp161769_c0_seq1.mrna1
Chr1	gffcl	locus	125473345	125473689	.	+	.	ID=RLOC_00010895;geneIDs=comp146180_c0_seq1.path1;transcripts=comp146180_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125473345	125473689	.	+	.	ID=comp146180_c0_seq1.mrna1;geneID=comp146180_c0_seq1.path1;Name=comp146180_c0_seq1;Dir=indeterminatecoverage=84.6;identity=99.1;matches=342;mismatches=3;indels=0;unknowns=0;Target=comp146180_c0_seq1 345 1 .;CDS_Target=comp146180_c0_seq1 345 253 .;locus=RLOC_00010895
Chr1	stalkie_big_nohaplotig	exon	125473345	125473689	99	+	.	Parent=comp146180_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	125473597	125473689	.	+	0	Parent=comp146180_c0_seq1.mrna1
Chr1	gffcl	locus	125479386	125479956	.	-	.	ID=RLOC_00010896;geneIDs=comp134999_c0_seq1.path1;transcripts=comp134999_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125479386	125479956	.	-	.	ID=comp134999_c0_seq1.mrna1;geneID=comp134999_c0_seq1.path1;Name=comp134999_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.8;matches=568;mismatches=2;indels=11;unknowns=0;Target=comp134999_c0_seq1 580 1 .;CDS_Target=comp134999_c0_seq1 96 79 .;locus=RLOC_00010896
Chr1	stalkie_big_nohaplotig	exon	125479386	125479956	97	-	.	Parent=comp134999_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	125479860	125479877	.	-	0	Parent=comp134999_c0_seq1.mrna1
Chr1	gffcl	locus	125487718	125501392	.	+	.	ID=RLOC_00010897;geneIDs=comp160204_c0_seq1.path1;transcripts=comp160204_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125487718	125501392	.	+	.	ID=comp160204_c0_seq1.mrna1;geneID=comp160204_c0_seq1.path1;Name=comp160204_c0_seq1;Dir=indeterminatecoverage=44.2;identity=97.9;matches=326;mismatches=7;indels=0;unknowns=0;Target=comp160204_c0_seq1 394 296 .;locus=RLOC_00010897
Chr1	stalkie_big_nohaplotig	exon	125487718	125488041	97	+	.	Parent=comp160204_c0_seq1.mrna1;Target=comp160204_c0_seq1 581 258 .
Chr1	stalkie_big_nohaplotig	exon	125501385	125501392	100	+	.	Parent=comp160204_c0_seq1.mrna1;Target=comp160204_c0_seq1 639 632 .
Chr1	stalkie_big_nohaplotig	CDS	125487756	125487854	.	+	0	Parent=comp160204_c0_seq1.mrna1
Chr1	gffcl	locus	125502520	125503109	.	+	.	ID=RLOC_00010898;geneIDs=FBgn0003274.1.path1;transcripts=FBgn0003274.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125502520	125503109	.	+	.	ID=FBgn0003274.1.mrna1;geneID=FBgn0003274.1.path1;Name=FBgn0003274.1;Dir=sensecoverage=100.0;identity=99.8;matches=401;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010898
Chr1	stalkie_big_nohaplotig	exon	125502520	125502578	100	+	.	Parent=FBgn0003274.1.mrna1;Target=FBgn0003274.1 1 59 +
Chr1	stalkie_big_nohaplotig	exon	125502767	125503109	99	+	.	Parent=FBgn0003274.1.mrna1;Target=FBgn0003274.1 60 402 +
Chr1	stalkie_big_nohaplotig	CDS	125502520	125502578	.	+	0	Parent=FBgn0003274.1.mrna1;Target=FBgn0003274.1 1 59 +
Chr1	stalkie_big_nohaplotig	CDS	125502767	125503109	.	+	1	Parent=FBgn0003274.1.mrna1;Target=FBgn0003274.1 60 402 +
Chr1	gffcl	locus	125507861	125508145	.	-	.	ID=RLOC_00010900;geneIDs=comp117708_c0_seq1.path1;transcripts=comp117708_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125507861	125508145	.	-	.	ID=comp117708_c0_seq1.mrna1;geneID=comp117708_c0_seq1.path1;Name=comp117708_c0_seq1;Dir=indeterminatecoverage=66.7;identity=100.0;matches=285;mismatches=0;indels=0;unknowns=0;Target=comp117708_c0_seq1 405 121 .;CDS_Target=comp117708_c0_seq1 381 271 .;locus=RLOC_00010900
Chr1	stalkie_big_nohaplotig	exon	125507861	125508145	100	-	.	Parent=comp117708_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	125507885	125507995	.	-	0	Parent=comp117708_c0_seq1.mrna1
Chr1	gffcl	locus	125509853	125511094	.	-	.	ID=RLOC_00010901;geneIDs=FBgn0030710.1.path1;transcripts=FBgn0030710.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125509853	125511094	.	-	.	ID=FBgn0030710.1.mrna1;geneID=FBgn0030710.1.path1;Name=FBgn0030710.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1239;mismatches=3;indels=0;unknowns=0;Target=FBgn0030710.1 1242 1 .;locus=RLOC_00010901
Chr1	stalkie_big_nohaplotig	exon	125509853	125511094	99	-	.	Parent=FBgn0030710.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	125509853	125511094	.	-	0	Parent=FBgn0030710.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127221216	127223523	.	+	.	ID=FBgn0015024.4.mrna1;geneID=FBgn0015024.4.path1;Name=FBgn0015024.4;Dir=sensecoverage=99.8;identity=99.5;matches=1108;mismatches=6;indels=0;unknowns=0;locus=RLOC_00010902
Chr1	stalkie_big_nohaplotig	exon	127221216	127221237	100	+	.	Parent=FBgn0015024.4.mrna1;Target=FBgn0015024.4 1 22 +
Chr1	stalkie_big_nohaplotig	exon	127222432	127223523	99	+	.	Parent=FBgn0015024.4.mrna1;Target=FBgn0015024.4 23 1114 +
Chr1	stalkie_big_nohaplotig	CDS	127221216	127221237	.	+	0	Parent=FBgn0015024.4.mrna1;Target=FBgn0015024.4 1 22 +
Chr1	stalkie_big_nohaplotig	CDS	127222432	127223522	.	+	2	Parent=FBgn0015024.4.mrna1;Target=FBgn0015024.4 23 1113 +
Chr1	gffcl	locus	125519363	125519810	.	+	.	ID=RLOC_00010903;geneIDs=comp83878_c0_seq1.path1;transcripts=comp83878_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125519363	125519810	.	+	.	ID=comp83878_c0_seq1.mrna1;geneID=comp83878_c0_seq1.path1;Name=comp83878_c0_seq1;Dir=indeterminatecoverage=89.9;identity=91.7;matches=411;mismatches=23;indels=14;unknowns=0;Target=comp83878_c0_seq1 435 2 .;CDS_Target=comp83878_c0_seq1 142 2 .;locus=RLOC_00010903
Chr1	stalkie_big_nohaplotig	exon	125519363	125519810	91	+	.	Parent=comp83878_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	125519363	125519503	.	+	0	Parent=comp83878_c0_seq1.mrna1
Chr1	gffcl	locus	125534245	125535536	.	+	.	ID=RLOC_00010904;geneIDs=FBgn0032768.1.path1;transcripts=FBgn0032768.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125534245	125535536	.	+	.	ID=FBgn0032768.1.mrna1;geneID=FBgn0032768.1.path1;Name=FBgn0032768.1;Dir=sensecoverage=99.4;identity=99.8;matches=1074;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010904
Chr1	stalkie_big_nohaplotig	exon	125534245	125534455	100	+	.	Parent=FBgn0032768.1.mrna1;Target=FBgn0032768.1 8 218 +
Chr1	stalkie_big_nohaplotig	exon	125534523	125534977	99	+	.	Parent=FBgn0032768.1.mrna1;Target=FBgn0032768.1 219 673 +
Chr1	stalkie_big_nohaplotig	exon	125535044	125535331	99	+	.	Parent=FBgn0032768.1.mrna1;Target=FBgn0032768.1 674 961 +
Chr1	stalkie_big_nohaplotig	exon	125535415	125535536	100	+	.	Parent=FBgn0032768.1.mrna1;Target=FBgn0032768.1 962 1083 +
Chr1	stalkie_big_nohaplotig	CDS	125534247	125534455	.	+	0	Parent=FBgn0032768.1.mrna1;Target=FBgn0032768.1 10 218 +
Chr1	stalkie_big_nohaplotig	CDS	125534523	125534977	.	+	1	Parent=FBgn0032768.1.mrna1;Target=FBgn0032768.1 219 673 +
Chr1	stalkie_big_nohaplotig	CDS	125535044	125535331	.	+	2	Parent=FBgn0032768.1.mrna1;Target=FBgn0032768.1 674 961 +
Chr1	stalkie_big_nohaplotig	CDS	125535415	125535536	.	+	2	Parent=FBgn0032768.1.mrna1;Target=FBgn0032768.1 962 1083 +
Chr1	gffcl	locus	125552066	125556401	.	-	.	ID=RLOC_00010906;geneIDs=FBgn0030246.1.path1;transcripts=FBgn0030246.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125552066	125556401	.	-	.	ID=FBgn0030246.1.mrna1;geneID=FBgn0030246.1.path1;Name=FBgn0030246.1;Dir=sensecoverage=100.0;identity=99.7;matches=3868;mismatches=11;indels=0;unknowns=0;locus=RLOC_00010906
Chr1	stalkie_big_nohaplotig	exon	125552066	125552625	99	-	.	Parent=FBgn0030246.1.mrna1;Target=FBgn0030246.1 3320 3879 +
Chr1	stalkie_big_nohaplotig	exon	125552705	125552903	97	-	.	Parent=FBgn0030246.1.mrna1;Target=FBgn0030246.1 3121 3319 +
Chr1	stalkie_big_nohaplotig	exon	125552959	125553715	100	-	.	Parent=FBgn0030246.1.mrna1;Target=FBgn0030246.1 2364 3120 +
Chr1	stalkie_big_nohaplotig	exon	125553783	125553987	100	-	.	Parent=FBgn0030246.1.mrna1;Target=FBgn0030246.1 2159 2363 +
Chr1	stalkie_big_nohaplotig	exon	125554065	125554791	99	-	.	Parent=FBgn0030246.1.mrna1;Target=FBgn0030246.1 1432 2158 +
Chr1	stalkie_big_nohaplotig	exon	125554849	125555408	99	-	.	Parent=FBgn0030246.1.mrna1;Target=FBgn0030246.1 872 1431 +
Chr1	stalkie_big_nohaplotig	exon	125555467	125556218	99	-	.	Parent=FBgn0030246.1.mrna1;Target=FBgn0030246.1 120 871 +
Chr1	stalkie_big_nohaplotig	exon	125556283	125556401	100	-	.	Parent=FBgn0030246.1.mrna1;Target=FBgn0030246.1 1 119 +
Chr1	stalkie_big_nohaplotig	CDS	125552066	125552625	.	-	2	Parent=FBgn0030246.1.mrna1;Target=FBgn0030246.1 3320 3879 +
Chr1	stalkie_big_nohaplotig	CDS	125552705	125552903	.	-	0	Parent=FBgn0030246.1.mrna1;Target=FBgn0030246.1 3121 3319 +
Chr1	stalkie_big_nohaplotig	CDS	125552959	125553715	.	-	1	Parent=FBgn0030246.1.mrna1;Target=FBgn0030246.1 2364 3120 +
Chr1	stalkie_big_nohaplotig	CDS	125553783	125553987	.	-	2	Parent=FBgn0030246.1.mrna1;Target=FBgn0030246.1 2159 2363 +
Chr1	stalkie_big_nohaplotig	CDS	125554065	125554791	.	-	0	Parent=FBgn0030246.1.mrna1;Target=FBgn0030246.1 1432 2158 +
Chr1	stalkie_big_nohaplotig	CDS	125554849	125555408	.	-	2	Parent=FBgn0030246.1.mrna1;Target=FBgn0030246.1 872 1431 +
Chr1	stalkie_big_nohaplotig	CDS	125555467	125556218	.	-	1	Parent=FBgn0030246.1.mrna1;Target=FBgn0030246.1 120 871 +
Chr1	stalkie_big_nohaplotig	CDS	125556283	125556401	.	-	0	Parent=FBgn0030246.1.mrna1;Target=FBgn0030246.1 1 119 +
Chr1	gffcl	locus	125557617	125559619	.	+	.	ID=RLOC_00010907;geneIDs=ORF494.path1;transcripts=ORF494.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125557617	125559619	.	+	.	ID=ORF494.mrna1;geneID=ORF494.path1;Name=ORF494;Dir=sensecoverage=100.0;identity=99.3;matches=1719;mismatches=12;indels=0;unknowns=0;locus=RLOC_00010907
Chr1	stalkie_big_nohaplotig	exon	125557617	125557670	96	+	.	Parent=ORF494.mrna1;Target=ORF494 1 54 +
Chr1	stalkie_big_nohaplotig	exon	125557729	125559038	99	+	.	Parent=ORF494.mrna1;Target=ORF494 55 1364 +
Chr1	stalkie_big_nohaplotig	exon	125559198	125559411	100	+	.	Parent=ORF494.mrna1;Target=ORF494 1365 1578 +
Chr1	stalkie_big_nohaplotig	exon	125559467	125559619	100	+	.	Parent=ORF494.mrna1;Target=ORF494 1579 1731 +
Chr1	stalkie_big_nohaplotig	CDS	125557617	125557670	.	+	0	Parent=ORF494.mrna1;Target=ORF494 1 54 +
Chr1	stalkie_big_nohaplotig	CDS	125557729	125559038	.	+	0	Parent=ORF494.mrna1;Target=ORF494 55 1364 +
Chr1	stalkie_big_nohaplotig	CDS	125559198	125559411	.	+	1	Parent=ORF494.mrna1;Target=ORF494 1365 1578 +
Chr1	stalkie_big_nohaplotig	CDS	125559467	125559619	.	+	0	Parent=ORF494.mrna1;Target=ORF494 1579 1731 +
Chr1	gffcl	locus	125561948	125583139	.	-	.	ID=RLOC_00010908;geneIDs=FBgn0017561.1.path1;transcripts=FBgn0017561.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125561948	125583139	.	-	.	ID=FBgn0017561.1.mrna1;geneID=FBgn0017561.1.path1;Name=FBgn0017561.1;Dir=sensecoverage=99.4;identity=99.6;matches=3030;mismatches=12;indels=0;unknowns=0;locus=RLOC_00010908
Chr1	stalkie_big_nohaplotig	exon	125561948	125564008	99	-	.	Parent=FBgn0017561.1.mrna1;Target=FBgn0017561.1 982 3042 +
Chr1	stalkie_big_nohaplotig	exon	125565988	125566135	100	-	.	Parent=FBgn0017561.1.mrna1;Target=FBgn0017561.1 834 981 +
Chr1	stalkie_big_nohaplotig	exon	125566817	125566920	100	-	.	Parent=FBgn0017561.1.mrna1;Target=FBgn0017561.1 730 833 +
Chr1	stalkie_big_nohaplotig	exon	125567002	125567253	99	-	.	Parent=FBgn0017561.1.mrna1;Target=FBgn0017561.1 478 729 +
Chr1	stalkie_big_nohaplotig	exon	125568166	125568467	99	-	.	Parent=FBgn0017561.1.mrna1;Target=FBgn0017561.1 176 477 +
Chr1	stalkie_big_nohaplotig	exon	125582965	125583139	100	-	.	Parent=FBgn0017561.1.mrna1;Target=FBgn0017561.1 1 175 +
Chr1	stalkie_big_nohaplotig	CDS	125561948	125564008	.	-	0	Parent=FBgn0017561.1.mrna1;Target=FBgn0017561.1 982 3042 +
Chr1	stalkie_big_nohaplotig	CDS	125565988	125566135	.	-	1	Parent=FBgn0017561.1.mrna1;Target=FBgn0017561.1 834 981 +
Chr1	stalkie_big_nohaplotig	CDS	125566817	125566920	.	-	0	Parent=FBgn0017561.1.mrna1;Target=FBgn0017561.1 730 833 +
Chr1	stalkie_big_nohaplotig	CDS	125567002	125567253	.	-	0	Parent=FBgn0017561.1.mrna1;Target=FBgn0017561.1 478 729 +
Chr1	stalkie_big_nohaplotig	CDS	125568166	125568467	.	-	2	Parent=FBgn0017561.1.mrna1;Target=FBgn0017561.1 176 477 +
Chr1	stalkie_big_nohaplotig	CDS	125582965	125583139	.	-	0	Parent=FBgn0017561.1.mrna1;Target=FBgn0017561.1 1 175 +
Chr1	stalkie_big_nohaplotig	mRNA	125699303	125701891	.	+	.	ID=FBgn0032369.2.mrna1;geneID=FBgn0032369.2.path1;Name=FBgn0032369.2;Dir=indeterminatecoverage=100.0;identity=99.7;matches=2582;mismatches=7;indels=0;unknowns=0;Target=FBgn0032369.2 2589 1 .;locus=RLOC_00010909
Chr1	stalkie_big_nohaplotig	exon	125699303	125701891	99	+	.	Parent=FBgn0032369.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	125699303	125701891	.	+	0	Parent=FBgn0032369.2.mrna1
Chr1	gffcl	locus	125608675	125613338	.	-	.	ID=RLOC_00010910;geneIDs=FBgn0052088.1.path1;transcripts=FBgn0052088.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125608675	125613338	.	-	.	ID=FBgn0052088.1.mrna1;geneID=FBgn0052088.1.path1;Name=FBgn0052088.1;Dir=sensecoverage=100.0;identity=99.6;matches=2721;mismatches=12;indels=0;unknowns=0;locus=RLOC_00010910
Chr1	stalkie_big_nohaplotig	exon	125608675	125608780	99	-	.	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 2628 2733 +
Chr1	stalkie_big_nohaplotig	exon	125608844	125609073	99	-	.	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 2398 2627 +
Chr1	stalkie_big_nohaplotig	exon	125609140	125609283	100	-	.	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 2254 2397 +
Chr1	stalkie_big_nohaplotig	exon	125609372	125609665	99	-	.	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 1960 2253 +
Chr1	stalkie_big_nohaplotig	exon	125609724	125609893	98	-	.	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 1790 1959 +
Chr1	stalkie_big_nohaplotig	exon	125610177	125610354	98	-	.	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 1612 1789 +
Chr1	stalkie_big_nohaplotig	exon	125610411	125610620	100	-	.	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 1402 1611 +
Chr1	stalkie_big_nohaplotig	exon	125610685	125610836	100	-	.	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 1250 1401 +
Chr1	stalkie_big_nohaplotig	exon	125610895	125611069	100	-	.	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 1075 1249 +
Chr1	stalkie_big_nohaplotig	exon	125611122	125611293	99	-	.	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 903 1074 +
Chr1	stalkie_big_nohaplotig	exon	125611351	125611547	100	-	.	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 706 902 +
Chr1	stalkie_big_nohaplotig	exon	125611609	125611732	100	-	.	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 582 705 +
Chr1	stalkie_big_nohaplotig	exon	125612643	125612754	98	-	.	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 470 581 +
Chr1	stalkie_big_nohaplotig	exon	125612811	125613231	100	-	.	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 49 469 +
Chr1	stalkie_big_nohaplotig	exon	125613291	125613338	100	-	.	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 1 48 +
Chr1	stalkie_big_nohaplotig	CDS	125608675	125608780	.	-	1	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 2628 2733 +
Chr1	stalkie_big_nohaplotig	CDS	125608844	125609073	.	-	0	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 2398 2627 +
Chr1	stalkie_big_nohaplotig	CDS	125609140	125609283	.	-	0	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 2254 2397 +
Chr1	stalkie_big_nohaplotig	CDS	125609372	125609665	.	-	0	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 1960 2253 +
Chr1	stalkie_big_nohaplotig	CDS	125609724	125609893	.	-	2	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 1790 1959 +
Chr1	stalkie_big_nohaplotig	CDS	125610177	125610354	.	-	0	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 1612 1789 +
Chr1	stalkie_big_nohaplotig	CDS	125610411	125610620	.	-	0	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 1402 1611 +
Chr1	stalkie_big_nohaplotig	CDS	125610685	125610836	.	-	2	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 1250 1401 +
Chr1	stalkie_big_nohaplotig	CDS	125610895	125611069	.	-	0	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 1075 1249 +
Chr1	stalkie_big_nohaplotig	CDS	125611122	125611293	.	-	1	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 903 1074 +
Chr1	stalkie_big_nohaplotig	CDS	125611351	125611547	.	-	0	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 706 902 +
Chr1	stalkie_big_nohaplotig	CDS	125611609	125611732	.	-	1	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 582 705 +
Chr1	stalkie_big_nohaplotig	CDS	125612643	125612754	.	-	2	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 470 581 +
Chr1	stalkie_big_nohaplotig	CDS	125612811	125613231	.	-	0	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 49 469 +
Chr1	stalkie_big_nohaplotig	CDS	125613291	125613338	.	-	0	Parent=FBgn0052088.1.mrna1;Target=FBgn0052088.1 1 48 +
Chr1	gffcl	locus	125615103	125619103	.	+	.	ID=RLOC_00010911;geneIDs=FBgn0040344.1.path1;transcripts=FBgn0040344.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125615103	125619103	.	+	.	ID=FBgn0040344.1.mrna1;geneID=FBgn0040344.1.path1;Name=FBgn0040344.1;Dir=sensecoverage=100.0;identity=99.6;matches=2663;mismatches=10;indels=0;unknowns=0;locus=RLOC_00010911
Chr1	stalkie_big_nohaplotig	exon	125615103	125615223	100	+	.	Parent=FBgn0040344.1.mrna1;Target=FBgn0040344.1 1 121 +
Chr1	stalkie_big_nohaplotig	exon	125615281	125615662	100	+	.	Parent=FBgn0040344.1.mrna1;Target=FBgn0040344.1 122 503 +
Chr1	stalkie_big_nohaplotig	exon	125615733	125616041	100	+	.	Parent=FBgn0040344.1.mrna1;Target=FBgn0040344.1 504 812 +
Chr1	stalkie_big_nohaplotig	exon	125616104	125616218	100	+	.	Parent=FBgn0040344.1.mrna1;Target=FBgn0040344.1 813 927 +
Chr1	stalkie_big_nohaplotig	exon	125616769	125616932	98	+	.	Parent=FBgn0040344.1.mrna1;Target=FBgn0040344.1 928 1091 +
Chr1	stalkie_big_nohaplotig	exon	125616996	125617820	99	+	.	Parent=FBgn0040344.1.mrna1;Target=FBgn0040344.1 1092 1916 +
Chr1	stalkie_big_nohaplotig	exon	125617879	125618054	98	+	.	Parent=FBgn0040344.1.mrna1;Target=FBgn0040344.1 1917 2092 +
Chr1	stalkie_big_nohaplotig	exon	125618470	125618648	100	+	.	Parent=FBgn0040344.1.mrna1;Target=FBgn0040344.1 2093 2271 +
Chr1	stalkie_big_nohaplotig	exon	125618702	125619103	100	+	.	Parent=FBgn0040344.1.mrna1;Target=FBgn0040344.1 2272 2673 +
Chr1	stalkie_big_nohaplotig	CDS	125615103	125615223	.	+	0	Parent=FBgn0040344.1.mrna1;Target=FBgn0040344.1 1 121 +
Chr1	stalkie_big_nohaplotig	CDS	125615281	125615662	.	+	2	Parent=FBgn0040344.1.mrna1;Target=FBgn0040344.1 122 503 +
Chr1	stalkie_big_nohaplotig	CDS	125615733	125616041	.	+	1	Parent=FBgn0040344.1.mrna1;Target=FBgn0040344.1 504 812 +
Chr1	stalkie_big_nohaplotig	CDS	125616104	125616218	.	+	1	Parent=FBgn0040344.1.mrna1;Target=FBgn0040344.1 813 927 +
Chr1	stalkie_big_nohaplotig	CDS	125616769	125616932	.	+	0	Parent=FBgn0040344.1.mrna1;Target=FBgn0040344.1 928 1091 +
Chr1	stalkie_big_nohaplotig	CDS	125616996	125617820	.	+	1	Parent=FBgn0040344.1.mrna1;Target=FBgn0040344.1 1092 1916 +
Chr1	stalkie_big_nohaplotig	CDS	125617879	125618054	.	+	1	Parent=FBgn0040344.1.mrna1;Target=FBgn0040344.1 1917 2092 +
Chr1	stalkie_big_nohaplotig	CDS	125618470	125618648	.	+	2	Parent=FBgn0040344.1.mrna1;Target=FBgn0040344.1 2093 2271 +
Chr1	stalkie_big_nohaplotig	CDS	125618702	125619103	.	+	0	Parent=FBgn0040344.1.mrna1;Target=FBgn0040344.1 2272 2673 +
Chr1	gffcl	locus	125622508	125623380	.	-	.	ID=RLOC_00010912;geneIDs=comp160370_c0_seq1.path1;transcripts=comp160370_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125622508	125623380	.	-	.	ID=comp160370_c0_seq1.mrna1;geneID=comp160370_c0_seq1.path1;Name=comp160370_c0_seq1;Dir=antisensecoverage=100.0;identity=93.1;matches=780;mismatches=25;indels=33;unknowns=0;locus=RLOC_00010912
Chr1	stalkie_big_nohaplotig	exon	125622508	125622884	99	-	.	Parent=comp160370_c0_seq1.mrna1;Target=comp160370_c0_seq1 1 377 -
Chr1	stalkie_big_nohaplotig	exon	125622953	125623380	87	-	.	Parent=comp160370_c0_seq1.mrna1;Target=comp160370_c0_seq1 378 838 -
Chr1	stalkie_big_nohaplotig	CDS	125622679	125622884	.	-	2	Parent=comp160370_c0_seq1.mrna1;Target=comp160370_c0_seq1 172 377 .
Chr1	stalkie_big_nohaplotig	CDS	125622953	125623379	.	-	0	Parent=comp160370_c0_seq1.mrna1;Target=comp160370_c0_seq1 378 837 .
Chr1	gffcl	locus	125630125	125634232	.	-	.	ID=RLOC_00010913;geneIDs=comp158068_c0_seq1.path2;transcripts=comp158068_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	125630125	125634232	.	-	.	ID=comp158068_c0_seq1.mrna2;geneID=comp158068_c0_seq1.path2;Name=comp158068_c0_seq1;Dir=antisensecoverage=100.0;identity=96.5;matches=553;mismatches=7;indels=13;unknowns=0;Target=comp158068_c0_seq1 490 570 .;locus=RLOC_00010913
Chr1	stalkie_big_nohaplotig	exon	125630125	125630592	96	-	.	Parent=comp158068_c0_seq1.mrna2;Target=comp158068_c0_seq1 1 480 -
Chr1	stalkie_big_nohaplotig	exon	125634140	125634232	98	-	.	Parent=comp158068_c0_seq1.mrna2;Target=comp158068_c0_seq1 481 572 -
Chr1	stalkie_big_nohaplotig	CDS	125634149	125634230	.	-	0	Parent=comp158068_c0_seq1.mrna2
Chr1	gffcl	locus	125639176	125639592	.	-	.	ID=RLOC_00010914;geneIDs=Dv_FBgn0201935.1.path1;transcripts=Dv_FBgn0201935.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125639176	125639592	.	-	.	ID=Dv_FBgn0201935.1.mrna1;geneID=Dv_FBgn0201935.1.path1;Name=Dv_FBgn0201935.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=415;mismatches=2;indels=0;unknowns=0;Target=Dv_FBgn0201935.1 417 1 .;locus=RLOC_00010914
Chr1	stalkie_big_nohaplotig	exon	125639176	125639592	99	-	.	Parent=Dv_FBgn0201935.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	125639176	125639592	.	-	0	Parent=Dv_FBgn0201935.1.mrna1
Chr1	gffcl	locus	125641485	125645403	.	+	.	ID=RLOC_00010915;geneIDs=FBgn0029861.1.path1;transcripts=FBgn0029861.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125641485	125645403	.	+	.	ID=FBgn0029861.1.mrna1;geneID=FBgn0029861.1.path1;Name=FBgn0029861.1;Dir=sensecoverage=100.0;identity=99.6;matches=2695;mismatches=11;indels=0;unknowns=0;locus=RLOC_00010915
Chr1	stalkie_big_nohaplotig	exon	125641485	125641586	100	+	.	Parent=FBgn0029861.1.mrna1;Target=FBgn0029861.1 1 102 +
Chr1	stalkie_big_nohaplotig	exon	125641746	125641936	100	+	.	Parent=FBgn0029861.1.mrna1;Target=FBgn0029861.1 103 293 +
Chr1	stalkie_big_nohaplotig	exon	125641995	125642434	99	+	.	Parent=FBgn0029861.1.mrna1;Target=FBgn0029861.1 294 733 +
Chr1	stalkie_big_nohaplotig	exon	125642667	125642926	99	+	.	Parent=FBgn0029861.1.mrna1;Target=FBgn0029861.1 734 993 +
Chr1	stalkie_big_nohaplotig	exon	125642996	125644533	99	+	.	Parent=FBgn0029861.1.mrna1;Target=FBgn0029861.1 994 2531 +
Chr1	stalkie_big_nohaplotig	exon	125645229	125645403	98	+	.	Parent=FBgn0029861.1.mrna1;Target=FBgn0029861.1 2532 2706 +
Chr1	stalkie_big_nohaplotig	CDS	125641485	125641586	.	+	0	Parent=FBgn0029861.1.mrna1;Target=FBgn0029861.1 1 102 +
Chr1	stalkie_big_nohaplotig	CDS	125641746	125641936	.	+	0	Parent=FBgn0029861.1.mrna1;Target=FBgn0029861.1 103 293 +
Chr1	stalkie_big_nohaplotig	CDS	125641995	125642434	.	+	1	Parent=FBgn0029861.1.mrna1;Target=FBgn0029861.1 294 733 +
Chr1	stalkie_big_nohaplotig	CDS	125642667	125642926	.	+	2	Parent=FBgn0029861.1.mrna1;Target=FBgn0029861.1 734 993 +
Chr1	stalkie_big_nohaplotig	CDS	125642996	125644533	.	+	0	Parent=FBgn0029861.1.mrna1;Target=FBgn0029861.1 994 2531 +
Chr1	stalkie_big_nohaplotig	CDS	125645229	125645403	.	+	1	Parent=FBgn0029861.1.mrna1;Target=FBgn0029861.1 2532 2706 +
Chr1	gffcl	locus	125646027	125651634	.	-	.	ID=RLOC_00010916;geneIDs=FBgn0030206.path1;transcripts=FBgn0030206.mrna1,FBgn0030206.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125646027	125648311	.	-	.	ID=FBgn0030206.mrna1;geneID=FBgn0030206.path1;Name=FBgn0030206;Dir=sensecoverage=100.0;identity=99.2;matches=652;mismatches=4;indels=1;unknowns=0;locus=RLOC_00010916
Chr1	stalkie_big_nohaplotig	exon	125646027	125648311	.	-	.	Parent=FBgn0030206.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125646027	125651634	.	-	.	ID=FBgn0030206.mrna1;geneID=FBgn0030206.path1;Name=FBgn0030206;Dir=sensecoverage=100.0;identity=98.0;matches=547;mismatches=8;indels=3;unknowns=0;locus=RLOC_00010916
Chr1	stalkie_big_nohaplotig	exon	125646027	125646200	100	-	.	Parent=FBgn0030206.mrna1;Target=FBgn0030206 484 657 +
Chr1	stalkie_big_nohaplotig	exon	125646262	125646634	99	-	.	Parent=FBgn0030206.mrna1;Target=FBgn0030206 111 483 +
Chr1	stalkie_big_nohaplotig	exon	125648203	125648311	98	-	.	Parent=FBgn0030206.mrna1;Target=FBgn0030206 1 110 +
Chr1	stalkie_big_nohaplotig	exon	125651013	125651171	100	-	.	Parent=FBgn0030206.mrna1;Target=FBgn0030206 400 558 +
Chr1	stalkie_big_nohaplotig	exon	125651239	125651634	97	-	.	Parent=FBgn0030206.mrna1;Target=FBgn0030206 1 399 +
Chr1	stalkie_big_nohaplotig	CDS	125648230	125648309	97	-	0	Parent=FBgn0030206.mrna1;Target=FBgn0030206 3 83 +
Chr1	stalkie_big_nohaplotig	CDS	125651013	125651171	100	-	0	Parent=FBgn0030206.mrna1;Target=FBgn0030206 400 558 +
Chr1	stalkie_big_nohaplotig	CDS	125651239	125651604	100	-	0	Parent=FBgn0030206.mrna1;Target=FBgn0030206 34 399 +
Chr1	gffcl	locus	125654731	125655992	.	+	.	ID=RLOC_00010917;geneIDs=FBgn0003139.1.path1;transcripts=FBgn0003139.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125654731	125655992	.	+	.	ID=FBgn0003139.1.mrna1;geneID=FBgn0003139.1.path1;Name=FBgn0003139.1;Dir=sensecoverage=100.0;identity=99.8;matches=1027;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010917
Chr1	stalkie_big_nohaplotig	exon	125654731	125655015	100	+	.	Parent=FBgn0003139.1.mrna1;Target=FBgn0003139.1 1 285 +
Chr1	stalkie_big_nohaplotig	exon	125655072	125655200	98	+	.	Parent=FBgn0003139.1.mrna1;Target=FBgn0003139.1 286 414 +
Chr1	stalkie_big_nohaplotig	exon	125655255	125655413	100	+	.	Parent=FBgn0003139.1.mrna1;Target=FBgn0003139.1 415 573 +
Chr1	stalkie_big_nohaplotig	exon	125655476	125655630	100	+	.	Parent=FBgn0003139.1.mrna1;Target=FBgn0003139.1 574 728 +
Chr1	stalkie_big_nohaplotig	exon	125655692	125655992	100	+	.	Parent=FBgn0003139.1.mrna1;Target=FBgn0003139.1 729 1029 +
Chr1	stalkie_big_nohaplotig	CDS	125654731	125655015	.	+	0	Parent=FBgn0003139.1.mrna1;Target=FBgn0003139.1 1 285 +
Chr1	stalkie_big_nohaplotig	CDS	125655072	125655200	.	+	0	Parent=FBgn0003139.1.mrna1;Target=FBgn0003139.1 286 414 +
Chr1	stalkie_big_nohaplotig	CDS	125655255	125655413	.	+	0	Parent=FBgn0003139.1.mrna1;Target=FBgn0003139.1 415 573 +
Chr1	stalkie_big_nohaplotig	CDS	125655476	125655630	.	+	0	Parent=FBgn0003139.1.mrna1;Target=FBgn0003139.1 574 728 +
Chr1	stalkie_big_nohaplotig	CDS	125655692	125655992	.	+	1	Parent=FBgn0003139.1.mrna1;Target=FBgn0003139.1 729 1029 +
Chr1	gffcl	locus	125656499	125658112	.	-	.	ID=RLOC_00010918;geneIDs=FBgn0029778.1.path1;transcripts=FBgn0029778.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125656499	125658112	.	-	.	ID=FBgn0029778.1.mrna1;geneID=FBgn0029778.1.path1;Name=FBgn0029778.1;Dir=sensecoverage=100.0;identity=99.6;matches=1378;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010918
Chr1	stalkie_big_nohaplotig	exon	125656499	125656655	100	-	.	Parent=FBgn0029778.1.mrna1;Target=FBgn0029778.1 1227 1383 +
Chr1	stalkie_big_nohaplotig	exon	125656714	125656819	98	-	.	Parent=FBgn0029778.1.mrna1;Target=FBgn0029778.1 1121 1226 +
Chr1	stalkie_big_nohaplotig	exon	125656879	125657836	99	-	.	Parent=FBgn0029778.1.mrna1;Target=FBgn0029778.1 163 1120 +
Chr1	stalkie_big_nohaplotig	exon	125657896	125658014	99	-	.	Parent=FBgn0029778.1.mrna1;Target=FBgn0029778.1 44 162 +
Chr1	stalkie_big_nohaplotig	exon	125658070	125658112	100	-	.	Parent=FBgn0029778.1.mrna1;Target=FBgn0029778.1 1 43 +
Chr1	stalkie_big_nohaplotig	CDS	125656499	125656655	.	-	1	Parent=FBgn0029778.1.mrna1;Target=FBgn0029778.1 1227 1383 +
Chr1	stalkie_big_nohaplotig	CDS	125656714	125656819	.	-	2	Parent=FBgn0029778.1.mrna1;Target=FBgn0029778.1 1121 1226 +
Chr1	stalkie_big_nohaplotig	CDS	125656879	125657836	.	-	0	Parent=FBgn0029778.1.mrna1;Target=FBgn0029778.1 163 1120 +
Chr1	stalkie_big_nohaplotig	CDS	125657896	125658014	.	-	2	Parent=FBgn0029778.1.mrna1;Target=FBgn0029778.1 44 162 +
Chr1	stalkie_big_nohaplotig	CDS	125658070	125658112	.	-	0	Parent=FBgn0029778.1.mrna1;Target=FBgn0029778.1 1 43 +
Chr1	gffcl	locus	125671467	125671893	.	-	.	ID=RLOC_00010919;geneIDs=FBgn0031146.1.path1;transcripts=FBgn0031146.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125671467	125671893	.	-	.	ID=FBgn0031146.1.mrna1;geneID=FBgn0031146.1.path1;Name=FBgn0031146.1;Dir=sensecoverage=100.0;identity=99.7;matches=287;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010919
Chr1	stalkie_big_nohaplotig	exon	125671467	125671517	100	-	.	Parent=FBgn0031146.1.mrna1;Target=FBgn0031146.1 238 288 +
Chr1	stalkie_big_nohaplotig	exon	125671596	125671759	100	-	.	Parent=FBgn0031146.1.mrna1;Target=FBgn0031146.1 74 237 +
Chr1	stalkie_big_nohaplotig	exon	125671821	125671893	98	-	.	Parent=FBgn0031146.1.mrna1;Target=FBgn0031146.1 1 73 +
Chr1	stalkie_big_nohaplotig	CDS	125671467	125671517	.	-	0	Parent=FBgn0031146.1.mrna1;Target=FBgn0031146.1 238 288 +
Chr1	stalkie_big_nohaplotig	CDS	125671596	125671759	.	-	2	Parent=FBgn0031146.1.mrna1;Target=FBgn0031146.1 74 237 +
Chr1	stalkie_big_nohaplotig	CDS	125671821	125671893	.	-	0	Parent=FBgn0031146.1.mrna1;Target=FBgn0031146.1 1 73 +
Chr1	gffcl	locus	125870317	125888673	.	+	.	ID=RLOC_00010920;geneIDs=FBgn0040387.1.path1;transcripts=FBgn0040387.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125870317	125888673	.	+	.	ID=FBgn0040387.1.mrna1;geneID=FBgn0040387.1.path1;Name=FBgn0040387.1;Dir=sensecoverage=98.7;identity=99.9;matches=4823;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010920
Chr1	stalkie_big_nohaplotig	exon	125870317	125871373	100	+	.	Parent=FBgn0040387.1.mrna1;Target=FBgn0040387.1 63 1119 +
Chr1	stalkie_big_nohaplotig	exon	125874517	125874852	99	+	.	Parent=FBgn0040387.1.mrna1;Target=FBgn0040387.1 1120 1455 +
Chr1	stalkie_big_nohaplotig	exon	125875499	125876033	100	+	.	Parent=FBgn0040387.1.mrna1;Target=FBgn0040387.1 1456 1990 +
Chr1	stalkie_big_nohaplotig	exon	125876089	125876266	100	+	.	Parent=FBgn0040387.1.mrna1;Target=FBgn0040387.1 1991 2168 +
Chr1	stalkie_big_nohaplotig	exon	125876338	125876506	100	+	.	Parent=FBgn0040387.1.mrna1;Target=FBgn0040387.1 2169 2337 +
Chr1	stalkie_big_nohaplotig	exon	125882820	125883233	100	+	.	Parent=FBgn0040387.1.mrna1;Target=FBgn0040387.1 2338 2751 +
Chr1	stalkie_big_nohaplotig	exon	125883381	125885306	99	+	.	Parent=FBgn0040387.1.mrna1;Target=FBgn0040387.1 2752 4677 +
Chr1	stalkie_big_nohaplotig	exon	125885367	125885479	100	+	.	Parent=FBgn0040387.1.mrna1;Target=FBgn0040387.1 4678 4790 +
Chr1	stalkie_big_nohaplotig	exon	125888574	125888673	100	+	.	Parent=FBgn0040387.1.mrna1;Target=FBgn0040387.1 4791 4890 +
Chr1	stalkie_big_nohaplotig	CDS	125870318	125871373	.	+	0	Parent=FBgn0040387.1.mrna1;Target=FBgn0040387.1 64 1119 +
Chr1	stalkie_big_nohaplotig	CDS	125874517	125874852	.	+	0	Parent=FBgn0040387.1.mrna1;Target=FBgn0040387.1 1120 1455 +
Chr1	stalkie_big_nohaplotig	CDS	125875499	125876033	.	+	0	Parent=FBgn0040387.1.mrna1;Target=FBgn0040387.1 1456 1990 +
Chr1	stalkie_big_nohaplotig	CDS	125876089	125876266	.	+	2	Parent=FBgn0040387.1.mrna1;Target=FBgn0040387.1 1991 2168 +
Chr1	stalkie_big_nohaplotig	CDS	125876338	125876506	.	+	1	Parent=FBgn0040387.1.mrna1;Target=FBgn0040387.1 2169 2337 +
Chr1	stalkie_big_nohaplotig	CDS	125882820	125883233	.	+	0	Parent=FBgn0040387.1.mrna1;Target=FBgn0040387.1 2338 2751 +
Chr1	stalkie_big_nohaplotig	CDS	125883381	125885306	.	+	0	Parent=FBgn0040387.1.mrna1;Target=FBgn0040387.1 2752 4677 +
Chr1	stalkie_big_nohaplotig	CDS	125885367	125885479	.	+	0	Parent=FBgn0040387.1.mrna1;Target=FBgn0040387.1 4678 4790 +
Chr1	stalkie_big_nohaplotig	CDS	125888574	125888673	.	+	1	Parent=FBgn0040387.1.mrna1;Target=FBgn0040387.1 4791 4890 +
Chr1	gffcl	locus	125880946	125881401	.	-	.	ID=RLOC_00010921;geneIDs=comp145526_c0_seq1.path1;transcripts=comp145526_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125880946	125881401	.	-	.	ID=comp145526_c0_seq1.mrna1;geneID=comp145526_c0_seq1.path1;Name=comp145526_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=451;mismatches=5;indels=0;unknowns=0;Target=comp145526_c0_seq1 456 1 .;CDS_Target=comp145526_c0_seq1 308 207 .;locus=RLOC_00010921
Chr1	stalkie_big_nohaplotig	exon	125880946	125881401	98	-	.	Parent=comp145526_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	125881094	125881195	.	-	0	Parent=comp145526_c0_seq1.mrna1
Chr1	gffcl	locus	125894841	125895256	.	+	.	ID=RLOC_00010922;geneIDs=comp142640_c0_seq1.path1;transcripts=comp142640_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125894841	125895256	.	+	.	ID=comp142640_c0_seq1.mrna1;geneID=comp142640_c0_seq1.path1;Name=comp142640_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=414;mismatches=2;indels=0;unknowns=0;Target=comp142640_c0_seq1 416 1 .;CDS_Target=comp142640_c0_seq1 39 1 .;locus=RLOC_00010922
Chr1	stalkie_big_nohaplotig	exon	125894841	125895256	99	+	.	Parent=comp142640_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	125894841	125894879	.	+	0	Parent=comp142640_c0_seq1.mrna1
Chr1	gffcl	locus	125897811	125898101	.	-	.	ID=RLOC_00010923;geneIDs=comp146297_c0_seq1.path1;transcripts=comp146297_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	125897811	125898101	.	-	.	ID=comp146297_c0_seq1.mrna1;geneID=comp146297_c0_seq1.path1;Name=comp146297_c0_seq1;Dir=indeterminatecoverage=94.8;identity=99.3;matches=289;mismatches=2;indels=0;unknowns=0;Target=comp146297_c0_seq1 293 3 .;CDS_Target=comp146297_c0_seq1 92 3 .;locus=RLOC_00010923
Chr1	stalkie_big_nohaplotig	exon	125897811	125898101	99	-	.	Parent=comp146297_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	125898012	125898101	.	-	0	Parent=comp146297_c0_seq1.mrna1
Chr1	gffcl	locus	126009304	126050228	.	-	.	ID=RLOC_00010925;geneIDs=comp116326_c0_seq1.path1;transcripts=comp116326_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126009304	126050228	.	-	.	ID=comp116326_c0_seq1.mrna1;geneID=comp116326_c0_seq1.path1;Name=comp116326_c0_seq1;Dir=indeterminatecoverage=86.6;identity=88.9;matches=587;mismatches=54;indels=19;unknowns=0;Target=comp116326_c0_seq1 513 277 .;locus=RLOC_00010925
Chr1	stalkie_big_nohaplotig	exon	126009304	126009845	93	-	.	Parent=comp116326_c0_seq1.mrna1;Target=comp116326_c0_seq1 761 222 .
Chr1	stalkie_big_nohaplotig	exon	126023623	126023634	83	-	.	Parent=comp116326_c0_seq1.mrna1;Target=comp116326_c0_seq1 221 210 .
Chr1	stalkie_big_nohaplotig	exon	126024241	126024252	91	-	.	Parent=comp116326_c0_seq1.mrna1;Target=comp116326_c0_seq1 209 198 .
Chr1	stalkie_big_nohaplotig	exon	126026659	126026721	54	-	.	Parent=comp116326_c0_seq1.mrna1;Target=comp116326_c0_seq1 192 131 .
Chr1	stalkie_big_nohaplotig	exon	126033682	126033693	83	-	.	Parent=comp116326_c0_seq1.mrna1;Target=comp116326_c0_seq1 125 114 .
Chr1	stalkie_big_nohaplotig	exon	126034846	126034847	100	-	.	Parent=comp116326_c0_seq1.mrna1;Target=comp116326_c0_seq1 113 112 .
Chr1	stalkie_big_nohaplotig	exon	126037277	126037278	100	-	.	Parent=comp116326_c0_seq1.mrna1;Target=comp116326_c0_seq1 111 110 .
Chr1	stalkie_big_nohaplotig	exon	126050222	126050228	100	-	.	Parent=comp116326_c0_seq1.mrna1;Target=comp116326_c0_seq1 109 103 .
Chr1	stalkie_big_nohaplotig	CDS	126009552	126009790	.	-	0	Parent=comp116326_c0_seq1.mrna1
Chr1	gffcl	locus	126030624	126031481	.	+	.	ID=RLOC_00010926;geneIDs=FBgn0085388.1.path1;transcripts=FBgn0085388.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126030624	126031481	.	+	.	ID=FBgn0085388.1.mrna1;geneID=FBgn0085388.1.path1;Name=FBgn0085388.1;Dir=indeterminatecoverage=41.3;identity=99.5;matches=854;mismatches=4;indels=0;unknowns=0;Target=FBgn0085388.1 858 1 .;locus=RLOC_00010926
Chr1	stalkie_big_nohaplotig	exon	126030624	126031481	99	+	.	Parent=FBgn0085388.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	126030624	126031481	.	+	0	Parent=FBgn0085388.1.mrna1
Chr1	gffcl	locus	126038673	126039583	.	-	.	ID=RLOC_00010927;geneIDs=FBgn0031436.1.path1;transcripts=FBgn0031436.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126038673	126039583	.	-	.	ID=FBgn0031436.1.mrna1;geneID=FBgn0031436.1.path1;Name=FBgn0031436.1;Dir=sensecoverage=100.0;identity=100.0;matches=468;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010927
Chr1	stalkie_big_nohaplotig	exon	126038673	126038743	100	-	.	Parent=FBgn0031436.1.mrna1;Target=FBgn0031436.1 398 468 +
Chr1	stalkie_big_nohaplotig	exon	126039049	126039133	100	-	.	Parent=FBgn0031436.1.mrna1;Target=FBgn0031436.1 313 397 +
Chr1	stalkie_big_nohaplotig	exon	126039200	126039377	100	-	.	Parent=FBgn0031436.1.mrna1;Target=FBgn0031436.1 135 312 +
Chr1	stalkie_big_nohaplotig	exon	126039450	126039583	100	-	.	Parent=FBgn0031436.1.mrna1;Target=FBgn0031436.1 1 134 +
Chr1	stalkie_big_nohaplotig	CDS	126038673	126038743	.	-	2	Parent=FBgn0031436.1.mrna1;Target=FBgn0031436.1 398 468 +
Chr1	stalkie_big_nohaplotig	CDS	126039049	126039133	.	-	0	Parent=FBgn0031436.1.mrna1;Target=FBgn0031436.1 313 397 +
Chr1	stalkie_big_nohaplotig	CDS	126039200	126039377	.	-	1	Parent=FBgn0031436.1.mrna1;Target=FBgn0031436.1 135 312 +
Chr1	stalkie_big_nohaplotig	CDS	126039450	126039583	.	-	0	Parent=FBgn0031436.1.mrna1;Target=FBgn0031436.1 1 134 +
Chr1	stalkie_big_nohaplotig	mRNA	126105527	126105785	.	-	.	ID=comp118026_c0_seq1.mrna1;geneID=comp118026_c0_seq1.path1;Name=comp118026_c0_seq1;Dir=indeterminatecoverage=68.9;identity=98.1;matches=254;mismatches=5;indels=0;unknowns=0;Target=comp118026_c0_seq1 280 22 .;CDS_Target=comp118026_c0_seq1 169 23 .;locus=RLOC_00010928
Chr1	stalkie_big_nohaplotig	exon	126105527	126105785	98	-	.	Parent=comp118026_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	126105638	126105784	.	-	0	Parent=comp118026_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126133771	126944166	.	+	.	ID=comp160358_c0_seq1.mrna1;geneID=comp160358_c0_seq1.path1;Name=comp160358_c0_seq1;Dir=sensecoverage=84.6;identity=97.1;matches=2062;mismatches=28;indels=34;unknowns=0;Target=comp160358_c0_seq1 360 410 +;locus=RLOC_00010928
Chr1	stalkie_big_nohaplotig	exon	126133771	126134403	96	+	.	Parent=comp160358_c0_seq1.mrna1;Target=comp160358_c0_seq1 1 648 +
Chr1	stalkie_big_nohaplotig	exon	126157198	126157424	99	+	.	Parent=comp160358_c0_seq1.mrna1;Target=comp160358_c0_seq1 649 875 +
Chr1	stalkie_big_nohaplotig	exon	126163878	126165088	97	+	.	Parent=comp160358_c0_seq1.mrna1;Target=comp160358_c0_seq1 876 2073 +
Chr1	stalkie_big_nohaplotig	exon	126936921	126936924	100	+	.	Parent=comp160358_c0_seq1.mrna1;Target=comp160358_c0_seq1 2074 2077 +
Chr1	stalkie_big_nohaplotig	exon	126943966	126943978	100	+	.	Parent=comp160358_c0_seq1.mrna1;Target=comp160358_c0_seq1 2078 2090 +
Chr1	stalkie_big_nohaplotig	exon	126944149	126944166	83	+	.	Parent=comp160358_c0_seq1.mrna1;Target=comp160358_c0_seq1 2091 2108 +
Chr1	stalkie_big_nohaplotig	CDS	126134132	126134174	.	+	0	Parent=comp160358_c0_seq1.mrna1
Chr1	gffcl	locus	126095891	126096828	.	+	.	ID=RLOC_00010929;geneIDs=comp159988_c0_seq1.path1;transcripts=comp159988_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126095891	126096828	.	+	.	ID=comp159988_c0_seq1.mrna1;geneID=comp159988_c0_seq1.path1;Name=comp159988_c0_seq1;Dir=antisensecoverage=100.0;identity=95.7;matches=865;mismatches=15;indels=24;unknowns=0;locus=RLOC_00010929
Chr1	stalkie_big_nohaplotig	exon	126095891	126096198	98	+	.	Parent=comp159988_c0_seq1.mrna1;Target=comp159988_c0_seq1 596 904 -
Chr1	stalkie_big_nohaplotig	exon	126096257	126096828	94	+	.	Parent=comp159988_c0_seq1.mrna1;Target=comp159988_c0_seq1 1 595 -
Chr1	stalkie_big_nohaplotig	CDS	126096064	126096198	.	+	0	Parent=comp159988_c0_seq1.mrna1;Target=comp159988_c0_seq1 596 730 .
Chr1	stalkie_big_nohaplotig	CDS	126096257	126096442	.	+	0	Parent=comp159988_c0_seq1.mrna1;Target=comp159988_c0_seq1 410 595 .
Chr1	gffcl	locus	126109809	127977524	.	+	.	ID=RLOC_00010930;geneIDs=comp155281_c0_seq1.path1;transcripts=comp155281_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126109809	127977524	.	+	.	ID=comp155281_c0_seq1.mrna1;geneID=comp155281_c0_seq1.path1;Name=comp155281_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=1229;mismatches=14;indels=15;unknowns=0;Target=comp155281_c0_seq1 548 285 .;locus=RLOC_00010930
Chr1	stalkie_big_nohaplotig	exon	126109809	126111035	97	+	.	Parent=comp155281_c0_seq1.mrna1;Target=comp155281_c0_seq1 1222 1 .
Chr1	stalkie_big_nohaplotig	exon	127974961	127974964	100	+	.	Parent=comp155281_c0_seq1.mrna1;Target=comp155281_c0_seq1 1226 1223 .
Chr1	stalkie_big_nohaplotig	exon	127975129	127975133	100	+	.	Parent=comp155281_c0_seq1.mrna1;Target=comp155281_c0_seq1 1231 1227 .
Chr1	stalkie_big_nohaplotig	exon	127977508	127977524	100	+	.	Parent=comp155281_c0_seq1.mrna1;Target=comp155281_c0_seq1 1248 1232 .
Chr1	stalkie_big_nohaplotig	CDS	126110093	126110356	.	+	0	Parent=comp155281_c0_seq1.mrna1
Chr1	gffcl	locus	126118654	126119046	.	+	.	ID=RLOC_00010932;geneIDs=comp125127_c0_seq1.path1;transcripts=comp125127_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126118654	126119046	.	+	.	ID=comp125127_c0_seq1.mrna1;geneID=comp125127_c0_seq1.path1;Name=comp125127_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=393;mismatches=0;indels=5;unknowns=0;Target=comp125127_c0_seq1 398 1 .;CDS_Target=comp125127_c0_seq1 47 3 .;locus=RLOC_00010932
Chr1	stalkie_big_nohaplotig	exon	126118654	126119046	98	+	.	Parent=comp125127_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	126118656	126118695	.	+	0	Parent=comp125127_c0_seq1.mrna1
Chr1	gffcl	locus	126167483	126169104	.	-	.	ID=RLOC_00010933;geneIDs=comp161991_c1_seq1.path2;transcripts=comp161991_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	126167483	126169104	.	-	.	ID=comp161991_c1_seq1.mrna2;geneID=comp161991_c1_seq1.path2;Name=comp161991_c1_seq1;Dir=indeterminatecoverage=39.0;identity=99.6;matches=1615;mismatches=5;indels=2;unknowns=0;Target=comp161991_c1_seq1 1620 1 .;CDS_Target=comp161991_c1_seq1 868 686 .;locus=RLOC_00010933
Chr1	stalkie_big_nohaplotig	exon	126167483	126169104	99	-	.	Parent=comp161991_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	126168235	126168417	.	-	0	Parent=comp161991_c1_seq1.mrna2
Chr1	gffcl	locus	126181157	126182087	.	+	.	ID=RLOC_00010934;geneIDs=comp145957_c0_seq1.path1;transcripts=comp145957_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126181157	126182087	.	+	.	ID=comp145957_c0_seq1.mrna1;geneID=comp145957_c0_seq1.path1;Name=comp145957_c0_seq1;Dir=sensecoverage=99.9;identity=93.9;matches=696;mismatches=30;indels=15;unknowns=0;locus=RLOC_00010934
Chr1	stalkie_big_nohaplotig	exon	126181157	126181615	92	+	.	Parent=comp145957_c0_seq1.mrna1;Target=comp145957_c0_seq1 1 474 +
Chr1	stalkie_big_nohaplotig	exon	126181769	126181867	93	+	.	Parent=comp145957_c0_seq1.mrna1;Target=comp145957_c0_seq1 475 573 +
Chr1	stalkie_big_nohaplotig	exon	126181920	126182087	98	+	.	Parent=comp145957_c0_seq1.mrna1;Target=comp145957_c0_seq1 574 741 +
Chr1	stalkie_big_nohaplotig	CDS	126181832	126181867	.	+	0	Parent=comp145957_c0_seq1.mrna1;Target=comp145957_c0_seq1 538 573 +
Chr1	stalkie_big_nohaplotig	CDS	126181920	126182036	.	+	0	Parent=comp145957_c0_seq1.mrna1;Target=comp145957_c0_seq1 574 690 +
Chr1	gffcl	locus	126233750	126234826	.	-	.	ID=RLOC_00010936;geneIDs=FBgn0029866.1.path1;transcripts=FBgn0029866.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126233750	126234826	.	-	.	ID=FBgn0029866.1.mrna1;geneID=FBgn0029866.1.path1;Name=FBgn0029866.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1074;mismatches=3;indels=0;unknowns=0;Target=FBgn0029866.1 1077 1 .;locus=RLOC_00010936
Chr1	stalkie_big_nohaplotig	exon	126233750	126234826	99	-	.	Parent=FBgn0029866.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	126233750	126234826	.	-	0	Parent=FBgn0029866.1.mrna1
Chr1	gffcl	locus	126274313	126275957	.	-	.	ID=RLOC_00010938;geneIDs=comp146698_c0_seq1.path1;transcripts=comp146698_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126274313	126275957	.	-	.	ID=comp146698_c0_seq1.mrna1;geneID=comp146698_c0_seq1.path1;Name=comp146698_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.5;matches=800;mismatches=46;indels=19;unknowns=0;Target=comp146698_c0_seq1 201 1 .;locus=RLOC_00010938
Chr1	stalkie_big_nohaplotig	exon	126274313	126274723	92	-	.	Parent=comp146698_c0_seq1.mrna1;Target=comp146698_c0_seq1 846 453 .
Chr1	stalkie_big_nohaplotig	exon	126275504	126275957	92	-	.	Parent=comp146698_c0_seq1.mrna1;Target=comp146698_c0_seq1 452 1 .
Chr1	stalkie_big_nohaplotig	CDS	126275757	126275957	.	-	0	Parent=comp146698_c0_seq1.mrna1
Chr1	gffcl	locus	126281220	126281681	.	-	.	ID=RLOC_00010939;geneIDs=FBgn0250869.path1;transcripts=FBgn0250869.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126281220	126281681	.	-	.	ID=FBgn0250869.mrna1;geneID=FBgn0250869.path1;Name=FBgn0250869;Dir=indeterminatecoverage=100.0;identity=99.6;matches=460;mismatches=2;indels=0;unknowns=0;Target=FBgn0250869 462 1 .;locus=RLOC_00010939
Chr1	stalkie_big_nohaplotig	exon	126281220	126281681	99	-	.	Parent=FBgn0250869.mrna1
Chr1	stalkie_big_nohaplotig	CDS	126281220	126281681	.	-	0	Parent=FBgn0250869.mrna1
Chr1	gffcl	locus	126281789	126282079	.	-	.	ID=RLOC_00010940;geneIDs=comp145238_c0_seq1.path1;transcripts=comp145238_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126281789	126282079	.	-	.	ID=comp145238_c0_seq1.mrna1;geneID=comp145238_c0_seq1.path1;Name=comp145238_c0_seq1;Dir=indeterminatecoverage=81.7;identity=99.3;matches=289;mismatches=2;indels=0;unknowns=0;Target=comp145238_c0_seq1 311 21 .;CDS_Target=comp145238_c0_seq1 62 21 .;locus=RLOC_00010940
Chr1	stalkie_big_nohaplotig	exon	126281789	126282079	99	-	.	Parent=comp145238_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	126282038	126282079	.	-	0	Parent=comp145238_c0_seq1.mrna1
Chr1	gffcl	locus	126299110	126300165	.	+	.	ID=RLOC_00010941;geneIDs=FBgn0029867.1.path1;transcripts=FBgn0029867.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126299110	126300165	.	+	.	ID=FBgn0029867.1.mrna1;geneID=FBgn0029867.1.path1;Name=FBgn0029867.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1052;mismatches=4;indels=0;unknowns=0;Target=FBgn0029867.1 1056 1 .;locus=RLOC_00010941
Chr1	stalkie_big_nohaplotig	exon	126299110	126300165	99	+	.	Parent=FBgn0029867.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	126299110	126300165	.	+	0	Parent=FBgn0029867.1.mrna1
Chr1	gffcl	locus	126301413	126302114	.	-	.	ID=RLOC_00010942;geneIDs=FBgn0029868.1.path1;transcripts=FBgn0029868.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126301413	126302114	.	-	.	ID=FBgn0029868.1.mrna1;geneID=FBgn0029868.1.path1;Name=FBgn0029868.1;Dir=sensecoverage=99.8;identity=100.0;matches=512;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010942
Chr1	stalkie_big_nohaplotig	exon	126301413	126301519	100	-	.	Parent=FBgn0029868.1.mrna1;Target=FBgn0029868.1 406 512 +
Chr1	stalkie_big_nohaplotig	exon	126301589	126301809	100	-	.	Parent=FBgn0029868.1.mrna1;Target=FBgn0029868.1 185 405 +
Chr1	stalkie_big_nohaplotig	exon	126301875	126301996	100	-	.	Parent=FBgn0029868.1.mrna1;Target=FBgn0029868.1 63 184 +
Chr1	stalkie_big_nohaplotig	exon	126302053	126302114	100	-	.	Parent=FBgn0029868.1.mrna1;Target=FBgn0029868.1 1 62 +
Chr1	stalkie_big_nohaplotig	CDS	126301415	126301519	.	-	0	Parent=FBgn0029868.1.mrna1;Target=FBgn0029868.1 406 510 +
Chr1	stalkie_big_nohaplotig	CDS	126301589	126301809	.	-	2	Parent=FBgn0029868.1.mrna1;Target=FBgn0029868.1 185 405 +
Chr1	stalkie_big_nohaplotig	CDS	126301875	126301996	.	-	1	Parent=FBgn0029868.1.mrna1;Target=FBgn0029868.1 63 184 +
Chr1	stalkie_big_nohaplotig	CDS	126302053	126302114	.	-	0	Parent=FBgn0029868.1.mrna1;Target=FBgn0029868.1 1 62 +
Chr1	stalkie_big_nohaplotig	mRNA	126305912	126306279	.	+	.	ID=comp154434_c0_seq1.mrna1;geneID=comp154434_c0_seq1.path1;Name=comp154434_c0_seq1;Dir=indeterminatecoverage=97.4;identity=95.8;matches=364;mismatches=4;indels=12;unknowns=0;Target=comp154434_c0_seq1 380 1 .;CDS_Target=comp154434_c0_seq1 55 2 .;locus=RLOC_00010943
Chr1	stalkie_big_nohaplotig	exon	126305912	126306279	95	+	.	Parent=comp154434_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	126305913	126305966	.	+	0	Parent=comp154434_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126309084	126310493	.	-	.	ID=comp161105_c0_seq1.mrna1;geneID=comp161105_c0_seq1.path1;Name=comp161105_c0_seq1;Dir=indeterminatecoverage=98.5;identity=98.0;matches=1399;mismatches=11;indels=18;unknowns=0;Target=comp161105_c0_seq1 1428 1 .;CDS_Target=comp161105_c0_seq1 111 1 .;locus=RLOC_00010943
Chr1	stalkie_big_nohaplotig	exon	126309084	126310493	97	-	.	Parent=comp161105_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	126310383	126310493	.	-	0	Parent=comp161105_c0_seq1.mrna1
Chr1	gffcl	locus	126307107	126307698	.	+	.	ID=RLOC_00010944;geneIDs=comp150724_c0_seq1.path1;transcripts=comp150724_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126307107	126307698	.	+	.	ID=comp150724_c0_seq1.mrna1;geneID=comp150724_c0_seq1.path1;Name=comp150724_c0_seq1;Dir=indeterminatecoverage=96.4;identity=98.0;matches=582;mismatches=10;indels=2;unknowns=0;Target=comp150724_c0_seq1 594 1 .;CDS_Target=comp150724_c0_seq1 60 1 .;locus=RLOC_00010944
Chr1	stalkie_big_nohaplotig	exon	126307107	126307698	97	+	.	Parent=comp150724_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	126307107	126307166	.	+	0	Parent=comp150724_c0_seq1.mrna1
Chr1	gffcl	locus	126316087	126316786	.	-	.	ID=RLOC_00010945;geneIDs=FBgn0029868.1.path2;transcripts=FBgn0029868.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	126316087	126316786	.	-	.	ID=FBgn0029868.1.mrna2;geneID=FBgn0029868.1.path2;Name=FBgn0029868.1;Dir=sensecoverage=99.8;identity=99.8;matches=511;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010945
Chr1	stalkie_big_nohaplotig	exon	126316087	126316193	100	-	.	Parent=FBgn0029868.1.mrna2;Target=FBgn0029868.1 406 512 +
Chr1	stalkie_big_nohaplotig	exon	126316263	126316483	100	-	.	Parent=FBgn0029868.1.mrna2;Target=FBgn0029868.1 185 405 +
Chr1	stalkie_big_nohaplotig	exon	126316549	126316670	99	-	.	Parent=FBgn0029868.1.mrna2;Target=FBgn0029868.1 63 184 +
Chr1	stalkie_big_nohaplotig	exon	126316725	126316786	100	-	.	Parent=FBgn0029868.1.mrna2;Target=FBgn0029868.1 1 62 +
Chr1	stalkie_big_nohaplotig	CDS	126316089	126316193	.	-	0	Parent=FBgn0029868.1.mrna2;Target=FBgn0029868.1 406 510 +
Chr1	stalkie_big_nohaplotig	CDS	126316263	126316483	.	-	2	Parent=FBgn0029868.1.mrna2;Target=FBgn0029868.1 185 405 +
Chr1	stalkie_big_nohaplotig	CDS	126316549	126316670	.	-	1	Parent=FBgn0029868.1.mrna2;Target=FBgn0029868.1 63 184 +
Chr1	stalkie_big_nohaplotig	CDS	126316725	126316786	.	-	0	Parent=FBgn0029868.1.mrna2;Target=FBgn0029868.1 1 62 +
Chr1	gffcl	locus	126513455	126513982	.	-	.	ID=RLOC_00010950;geneIDs=comp144579_c0_seq1.path2;transcripts=comp144579_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	126513455	126513982	.	-	.	ID=comp144579_c0_seq1.mrna2;geneID=comp144579_c0_seq1.path2;Name=comp144579_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=527;mismatches=1;indels=0;unknowns=0;Target=comp144579_c0_seq1 529 2 .;CDS_Target=comp144579_c0_seq1 175 56 .;locus=RLOC_00010950
Chr1	stalkie_big_nohaplotig	exon	126513455	126513982	99	-	.	Parent=comp144579_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	126513809	126513928	.	-	0	Parent=comp144579_c0_seq1.mrna2
Chr1	gffcl	locus	126590195	126591226	.	-	.	ID=RLOC_00010951;geneIDs=ORF3084.path1;transcripts=ORF3084.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126590195	126591226	.	-	.	ID=ORF3084.mrna1;geneID=ORF3084.path1;Name=ORF3084;Dir=sensecoverage=100.0;identity=99.5;matches=767;mismatches=4;indels=0;unknowns=0;locus=RLOC_00010951
Chr1	stalkie_big_nohaplotig	exon	126590195	126590621	99	-	.	Parent=ORF3084.mrna1;Target=ORF3084 345 771 +
Chr1	stalkie_big_nohaplotig	exon	126590693	126590846	99	-	.	Parent=ORF3084.mrna1;Target=ORF3084 191 344 +
Chr1	stalkie_big_nohaplotig	exon	126591037	126591226	100	-	.	Parent=ORF3084.mrna1;Target=ORF3084 1 190 +
Chr1	stalkie_big_nohaplotig	CDS	126590195	126590621	.	-	1	Parent=ORF3084.mrna1;Target=ORF3084 345 771 +
Chr1	stalkie_big_nohaplotig	CDS	126590693	126590846	.	-	2	Parent=ORF3084.mrna1;Target=ORF3084 191 344 +
Chr1	stalkie_big_nohaplotig	CDS	126591037	126591226	.	-	0	Parent=ORF3084.mrna1;Target=ORF3084 1 190 +
Chr1	gffcl	locus	126592987	126594688	.	+	.	ID=RLOC_00010952;geneIDs=comp157976_c0_seq1.path1;transcripts=comp157976_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126592987	126594688	.	+	.	ID=comp157976_c0_seq1.mrna1;geneID=comp157976_c0_seq1.path1;Name=comp157976_c0_seq1;Dir=antisensecoverage=100.0;identity=99.2;matches=1327;mismatches=10;indels=1;unknowns=0;locus=RLOC_00010952
Chr1	stalkie_big_nohaplotig	exon	126592987	126593456	98	+	.	Parent=comp157976_c0_seq1.mrna1;Target=comp157976_c0_seq1 869 1338 -
Chr1	stalkie_big_nohaplotig	exon	126593692	126594197	99	+	.	Parent=comp157976_c0_seq1.mrna1;Target=comp157976_c0_seq1 363 868 -
Chr1	stalkie_big_nohaplotig	exon	126594261	126594490	99	+	.	Parent=comp157976_c0_seq1.mrna1;Target=comp157976_c0_seq1 132 362 -
Chr1	stalkie_big_nohaplotig	exon	126594558	126594688	99	+	.	Parent=comp157976_c0_seq1.mrna1;Target=comp157976_c0_seq1 1 131 -
Chr1	stalkie_big_nohaplotig	CDS	126594062	126594197	.	+	0	Parent=comp157976_c0_seq1.mrna1;Target=comp157976_c0_seq1 363 498 .
Chr1	stalkie_big_nohaplotig	CDS	126594261	126594426	.	+	2	Parent=comp157976_c0_seq1.mrna1;Target=comp157976_c0_seq1 196 362 .
Chr1	gffcl	locus	126594818	126596118	.	+	.	ID=RLOC_00010953;geneIDs=comp159567_c0_seq1.path1;transcripts=comp159567_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126594818	126596118	.	+	.	ID=comp159567_c0_seq1.mrna1;geneID=comp159567_c0_seq1.path1;Name=comp159567_c0_seq1;Dir=sensecoverage=100.0;identity=98.4;matches=1110;mismatches=10;indels=8;unknowns=0;Target=comp159567_c0_seq1 448 603 +;locus=RLOC_00010953
Chr1	stalkie_big_nohaplotig	exon	126594818	126595429	97	+	.	Parent=comp159567_c0_seq1.mrna1;Target=comp159567_c0_seq1 1 616 +
Chr1	stalkie_big_nohaplotig	exon	126595609	126596118	99	+	.	Parent=comp159567_c0_seq1.mrna1;Target=comp159567_c0_seq1 617 1126 +
Chr1	stalkie_big_nohaplotig	CDS	126595261	126595416	.	+	0	Parent=comp159567_c0_seq1.mrna1
Chr1	gffcl	locus	126597332	128267451	.	.	.	ID=RLOC_00010954;geneIDs=comp163459_c0_seq1.path1,comp163459_c0_seq1.path2;transcripts=comp163459_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126597332	128267451	.	+	.	ID=comp163459_c0_seq1.mrna1;geneID=comp163459_c0_seq1.path1;Name=comp163459_c0_seq1;Dir=indeterminatecoverage=77.5;identity=93.0;matches=620;mismatches=22;indels=25;unknowns=0;Target=comp163459_c0_seq1 411 304 .;locus=RLOC_00010954
Chr1	stalkie_big_nohaplotig	exon	126597332	126597951	92	+	.	Parent=comp163459_c0_seq1.mrna1;Target=comp163459_c0_seq1 645 1 .
Chr1	stalkie_big_nohaplotig	exon	128252136	128252139	100	+	.	Parent=comp163459_c0_seq1.mrna1;Target=comp163459_c0_seq1 649 646 .
Chr1	stalkie_big_nohaplotig	exon	128259563	128259573	90	+	.	Parent=comp163459_c0_seq1.mrna1;Target=comp163459_c0_seq1 660 650 .
Chr1	stalkie_big_nohaplotig	exon	128267445	128267451	100	+	.	Parent=comp163459_c0_seq1.mrna1;Target=comp163459_c0_seq1 667 661 .
Chr1	stalkie_big_nohaplotig	CDS	126597611	126597718	.	+	0	Parent=comp163459_c0_seq1.mrna1
Chr1	gffcl	locus	126599214	126599464	.	-	.	ID=RLOC_00010955;geneIDs=comp504295_c0_seq1.path1;transcripts=comp504295_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126599214	126599464	.	-	.	ID=comp504295_c0_seq1.mrna1;geneID=comp504295_c0_seq1.path1;Name=comp504295_c0_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=251;mismatches=0;indels=0;unknowns=0;Target=comp504295_c0_seq1 251 1 .;CDS_Target=comp504295_c0_seq1 249 202 .;locus=RLOC_00010955
Chr1	stalkie_big_nohaplotig	exon	126599214	126599464	100	-	.	Parent=comp504295_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	126599216	126599263	.	-	0	Parent=comp504295_c0_seq1.mrna1
Chr1	gffcl	locus	126600209	126600489	.	-	.	ID=RLOC_00010956;geneIDs=comp146397_c0_seq1.path1;transcripts=comp146397_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126600209	126600489	.	-	.	ID=comp146397_c0_seq1.mrna1;geneID=comp146397_c0_seq1.path1;Name=comp146397_c0_seq1;Dir=indeterminatecoverage=92.7;identity=98.2;matches=276;mismatches=5;indels=0;unknowns=0;Target=comp146397_c0_seq1 303 23 .;CDS_Target=comp146397_c0_seq1 260 156 .;locus=RLOC_00010956
Chr1	stalkie_big_nohaplotig	exon	126600209	126600489	98	-	.	Parent=comp146397_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	126600252	126600356	.	-	0	Parent=comp146397_c0_seq1.mrna1
Chr1	gffcl	locus	126602751	126619570	.	-	.	ID=RLOC_00010957;geneIDs=FBgn0029864.1.path1;transcripts=FBgn0029864.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126602751	126619570	.	-	.	ID=FBgn0029864.1.mrna1;geneID=FBgn0029864.1.path1;Name=FBgn0029864.1;Dir=sensecoverage=99.4;identity=99.7;matches=3114;mismatches=8;indels=0;unknowns=0;locus=RLOC_00010957
Chr1	stalkie_big_nohaplotig	exon	126602751	126604753	99	-	.	Parent=FBgn0029864.1.mrna1;Target=FBgn0029864.1 1127 3129 +
Chr1	stalkie_big_nohaplotig	exon	126604823	126605429	99	-	.	Parent=FBgn0029864.1.mrna1;Target=FBgn0029864.1 520 1126 +
Chr1	stalkie_big_nohaplotig	exon	126612521	126612661	100	-	.	Parent=FBgn0029864.1.mrna1;Target=FBgn0029864.1 379 519 +
Chr1	stalkie_big_nohaplotig	exon	126619200	126619570	99	-	.	Parent=FBgn0029864.1.mrna1;Target=FBgn0029864.1 8 378 +
Chr1	stalkie_big_nohaplotig	CDS	126602751	126604753	.	-	2	Parent=FBgn0029864.1.mrna1;Target=FBgn0029864.1 1127 3129 +
Chr1	stalkie_big_nohaplotig	CDS	126604823	126605429	.	-	0	Parent=FBgn0029864.1.mrna1;Target=FBgn0029864.1 520 1126 +
Chr1	stalkie_big_nohaplotig	CDS	126612521	126612661	.	-	0	Parent=FBgn0029864.1.mrna1;Target=FBgn0029864.1 379 519 +
Chr1	stalkie_big_nohaplotig	CDS	126619200	126619568	.	-	0	Parent=FBgn0029864.1.mrna1;Target=FBgn0029864.1 10 378 +
Chr1	gffcl	locus	126656248	126668695	.	-	.	ID=RLOC_00010958;geneIDs=FBgn0029863.1.path1;transcripts=FBgn0029863.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126656248	126668695	.	-	.	ID=FBgn0029863.1.mrna1;geneID=FBgn0029863.1.path1;Name=FBgn0029863.1;Dir=sensecoverage=100.0;identity=100.0;matches=852;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010958
Chr1	stalkie_big_nohaplotig	exon	126656248	126656335	100	-	.	Parent=FBgn0029863.1.mrna1;Target=FBgn0029863.1 765 852 +
Chr1	stalkie_big_nohaplotig	exon	126656754	126656890	100	-	.	Parent=FBgn0029863.1.mrna1;Target=FBgn0029863.1 628 764 +
Chr1	stalkie_big_nohaplotig	exon	126656956	126657246	100	-	.	Parent=FBgn0029863.1.mrna1;Target=FBgn0029863.1 337 627 +
Chr1	stalkie_big_nohaplotig	exon	126659962	126660043	100	-	.	Parent=FBgn0029863.1.mrna1;Target=FBgn0029863.1 255 336 +
Chr1	stalkie_big_nohaplotig	exon	126660284	126660443	100	-	.	Parent=FBgn0029863.1.mrna1;Target=FBgn0029863.1 95 254 +
Chr1	stalkie_big_nohaplotig	exon	126668602	126668695	100	-	.	Parent=FBgn0029863.1.mrna1;Target=FBgn0029863.1 1 94 +
Chr1	stalkie_big_nohaplotig	CDS	126656248	126656335	.	-	1	Parent=FBgn0029863.1.mrna1;Target=FBgn0029863.1 765 852 +
Chr1	stalkie_big_nohaplotig	CDS	126656754	126656890	.	-	0	Parent=FBgn0029863.1.mrna1;Target=FBgn0029863.1 628 764 +
Chr1	stalkie_big_nohaplotig	CDS	126656956	126657246	.	-	0	Parent=FBgn0029863.1.mrna1;Target=FBgn0029863.1 337 627 +
Chr1	stalkie_big_nohaplotig	CDS	126659962	126660043	.	-	1	Parent=FBgn0029863.1.mrna1;Target=FBgn0029863.1 255 336 +
Chr1	stalkie_big_nohaplotig	CDS	126660284	126660443	.	-	2	Parent=FBgn0029863.1.mrna1;Target=FBgn0029863.1 95 254 +
Chr1	stalkie_big_nohaplotig	CDS	126668602	126668695	.	-	0	Parent=FBgn0029863.1.mrna1;Target=FBgn0029863.1 1 94 +
Chr1	gffcl	locus	126672764	126673996	.	+	.	ID=RLOC_00010959;geneIDs=FBgn0040066.1.path1;transcripts=FBgn0040066.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126672764	126673996	.	+	.	ID=FBgn0040066.1.mrna1;geneID=FBgn0040066.1.path1;Name=FBgn0040066.1;Dir=sensecoverage=100.0;identity=100.0;matches=1053;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010959
Chr1	stalkie_big_nohaplotig	exon	126672764	126672907	100	+	.	Parent=FBgn0040066.1.mrna1;Target=FBgn0040066.1 1 144 +
Chr1	stalkie_big_nohaplotig	exon	126672967	126673063	100	+	.	Parent=FBgn0040066.1.mrna1;Target=FBgn0040066.1 145 241 +
Chr1	stalkie_big_nohaplotig	exon	126673124	126673749	100	+	.	Parent=FBgn0040066.1.mrna1;Target=FBgn0040066.1 242 867 +
Chr1	stalkie_big_nohaplotig	exon	126673811	126673996	100	+	.	Parent=FBgn0040066.1.mrna1;Target=FBgn0040066.1 868 1053 +
Chr1	stalkie_big_nohaplotig	CDS	126672764	126672907	.	+	0	Parent=FBgn0040066.1.mrna1;Target=FBgn0040066.1 1 144 +
Chr1	stalkie_big_nohaplotig	CDS	126672967	126673063	.	+	0	Parent=FBgn0040066.1.mrna1;Target=FBgn0040066.1 145 241 +
Chr1	stalkie_big_nohaplotig	CDS	126673124	126673749	.	+	2	Parent=FBgn0040066.1.mrna1;Target=FBgn0040066.1 242 867 +
Chr1	stalkie_big_nohaplotig	CDS	126673811	126673996	.	+	0	Parent=FBgn0040066.1.mrna1;Target=FBgn0040066.1 868 1053 +
Chr1	gffcl	locus	126677029	126679761	.	+	.	ID=RLOC_00010960;geneIDs=FBgn0030321.1.path1;transcripts=FBgn0030321.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126677029	126679761	.	+	.	ID=FBgn0030321.1.mrna1;geneID=FBgn0030321.1.path1;Name=FBgn0030321.1;Dir=sensecoverage=100.0;identity=99.3;matches=2657;mismatches=18;indels=1;unknowns=0;Target=FBgn0030321.1 3 50 +;locus=RLOC_00010960
Chr1	stalkie_big_nohaplotig	exon	126677029	126678090	99	+	.	Parent=FBgn0030321.1.mrna1;Target=FBgn0030321.1 1 1063 +
Chr1	stalkie_big_nohaplotig	exon	126678149	126679761	99	+	.	Parent=FBgn0030321.1.mrna1;Target=FBgn0030321.1 1064 2676 +
Chr1	stalkie_big_nohaplotig	CDS	126677031	126677077	.	+	0	Parent=FBgn0030321.1.mrna1
Chr1	gffcl	locus	126682868	126705242	.	+	.	ID=RLOC_00010961;geneIDs=FBgn0030343.1.path1;transcripts=FBgn0030343.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126682868	126705242	.	+	.	ID=FBgn0030343.1.mrna1;geneID=FBgn0030343.1.path1;Name=FBgn0030343.1;Dir=sensecoverage=100.0;identity=99.3;matches=3906;mismatches=26;indels=0;unknowns=0;locus=RLOC_00010961
Chr1	stalkie_big_nohaplotig	exon	126682868	126684056	99	+	.	Parent=FBgn0030343.1.mrna1;Target=FBgn0030343.1 1 1189 +
Chr1	stalkie_big_nohaplotig	exon	126699052	126700298	99	+	.	Parent=FBgn0030343.1.mrna1;Target=FBgn0030343.1 1190 2436 +
Chr1	stalkie_big_nohaplotig	exon	126703683	126704459	99	+	.	Parent=FBgn0030343.1.mrna1;Target=FBgn0030343.1 2437 3213 +
Chr1	stalkie_big_nohaplotig	exon	126704524	126705242	98	+	.	Parent=FBgn0030343.1.mrna1;Target=FBgn0030343.1 3214 3932 +
Chr1	stalkie_big_nohaplotig	CDS	126682868	126684056	.	+	0	Parent=FBgn0030343.1.mrna1;Target=FBgn0030343.1 1 1189 +
Chr1	stalkie_big_nohaplotig	CDS	126699052	126700298	.	+	2	Parent=FBgn0030343.1.mrna1;Target=FBgn0030343.1 1190 2436 +
Chr1	stalkie_big_nohaplotig	CDS	126703683	126704459	.	+	0	Parent=FBgn0030343.1.mrna1;Target=FBgn0030343.1 2437 3213 +
Chr1	stalkie_big_nohaplotig	CDS	126704524	126705240	.	+	0	Parent=FBgn0030343.1.mrna1;Target=FBgn0030343.1 3214 3930 +
Chr1	gffcl	locus	126707292	126713303	.	-	.	ID=RLOC_00010962;geneIDs=FBgn0030344.1.path1;transcripts=FBgn0030344.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126707292	126713303	.	-	.	ID=FBgn0030344.1.mrna1;geneID=FBgn0030344.1.path1;Name=FBgn0030344.1;Dir=sensecoverage=100.0;identity=99.6;matches=3381;mismatches=15;indels=0;unknowns=0;locus=RLOC_00010962
Chr1	stalkie_big_nohaplotig	exon	126707292	126708140	99	-	.	Parent=FBgn0030344.1.mrna1;Target=FBgn0030344.1 2548 3396 +
Chr1	stalkie_big_nohaplotig	exon	126708550	126708769	99	-	.	Parent=FBgn0030344.1.mrna1;Target=FBgn0030344.1 2328 2547 +
Chr1	stalkie_big_nohaplotig	exon	126708829	126708989	100	-	.	Parent=FBgn0030344.1.mrna1;Target=FBgn0030344.1 2167 2327 +
Chr1	stalkie_big_nohaplotig	exon	126709060	126709183	100	-	.	Parent=FBgn0030344.1.mrna1;Target=FBgn0030344.1 2043 2166 +
Chr1	stalkie_big_nohaplotig	exon	126709417	126710033	99	-	.	Parent=FBgn0030344.1.mrna1;Target=FBgn0030344.1 1426 2042 +
Chr1	stalkie_big_nohaplotig	exon	126711627	126711747	100	-	.	Parent=FBgn0030344.1.mrna1;Target=FBgn0030344.1 1305 1425 +
Chr1	stalkie_big_nohaplotig	exon	126711805	126711890	100	-	.	Parent=FBgn0030344.1.mrna1;Target=FBgn0030344.1 1219 1304 +
Chr1	stalkie_big_nohaplotig	exon	126711963	126712699	99	-	.	Parent=FBgn0030344.1.mrna1;Target=FBgn0030344.1 482 1218 +
Chr1	stalkie_big_nohaplotig	exon	126712762	126712943	100	-	.	Parent=FBgn0030344.1.mrna1;Target=FBgn0030344.1 300 481 +
Chr1	stalkie_big_nohaplotig	exon	126713005	126713303	100	-	.	Parent=FBgn0030344.1.mrna1;Target=FBgn0030344.1 1 299 +
Chr1	stalkie_big_nohaplotig	CDS	126707292	126708140	.	-	0	Parent=FBgn0030344.1.mrna1;Target=FBgn0030344.1 2548 3396 +
Chr1	stalkie_big_nohaplotig	CDS	126708550	126708769	.	-	1	Parent=FBgn0030344.1.mrna1;Target=FBgn0030344.1 2328 2547 +
Chr1	stalkie_big_nohaplotig	CDS	126708829	126708989	.	-	0	Parent=FBgn0030344.1.mrna1;Target=FBgn0030344.1 2167 2327 +
Chr1	stalkie_big_nohaplotig	CDS	126709060	126709183	.	-	1	Parent=FBgn0030344.1.mrna1;Target=FBgn0030344.1 2043 2166 +
Chr1	stalkie_big_nohaplotig	CDS	126709417	126710033	.	-	0	Parent=FBgn0030344.1.mrna1;Target=FBgn0030344.1 1426 2042 +
Chr1	stalkie_big_nohaplotig	CDS	126711627	126711747	.	-	1	Parent=FBgn0030344.1.mrna1;Target=FBgn0030344.1 1305 1425 +
Chr1	stalkie_big_nohaplotig	CDS	126711805	126711890	.	-	0	Parent=FBgn0030344.1.mrna1;Target=FBgn0030344.1 1219 1304 +
Chr1	stalkie_big_nohaplotig	CDS	126711963	126712699	.	-	2	Parent=FBgn0030344.1.mrna1;Target=FBgn0030344.1 482 1218 +
Chr1	stalkie_big_nohaplotig	CDS	126712762	126712943	.	-	1	Parent=FBgn0030344.1.mrna1;Target=FBgn0030344.1 300 481 +
Chr1	stalkie_big_nohaplotig	CDS	126713005	126713303	.	-	0	Parent=FBgn0030344.1.mrna1;Target=FBgn0030344.1 1 299 +
Chr1	gffcl	locus	126715854	126718187	.	+	.	ID=RLOC_00010963;geneIDs=FBgn0030582.1.path1;transcripts=FBgn0030582.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126715854	126718187	.	+	.	ID=FBgn0030582.1.mrna1;geneID=FBgn0030582.1.path1;Name=FBgn0030582.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=2320;mismatches=14;indels=0;unknowns=0;Target=FBgn0030582.1 2334 1 .;locus=RLOC_00010963
Chr1	stalkie_big_nohaplotig	exon	126715854	126718187	99	+	.	Parent=FBgn0030582.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	126715854	126718187	.	+	0	Parent=FBgn0030582.1.mrna1
Chr1	gffcl	locus	126721892	126722431	.	-	.	ID=RLOC_00010964;geneIDs=FBgn0030584.1.path1;transcripts=FBgn0030584.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126721892	126722431	.	-	.	ID=FBgn0030584.1.mrna1;geneID=FBgn0030584.1.path1;Name=FBgn0030584.1;Dir=sensecoverage=100.0;identity=99.6;matches=481;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010964
Chr1	stalkie_big_nohaplotig	exon	126721892	126722091	100	-	.	Parent=FBgn0030584.1.mrna1;Target=FBgn0030584.1 284 483 +
Chr1	stalkie_big_nohaplotig	exon	126722149	126722431	99	-	.	Parent=FBgn0030584.1.mrna1;Target=FBgn0030584.1 1 283 +
Chr1	stalkie_big_nohaplotig	CDS	126721892	126722091	.	-	2	Parent=FBgn0030584.1.mrna1;Target=FBgn0030584.1 284 483 +
Chr1	stalkie_big_nohaplotig	CDS	126722149	126722431	.	-	0	Parent=FBgn0030584.1.mrna1;Target=FBgn0030584.1 1 283 +
Chr1	gffcl	locus	126724094	126726938	.	+	.	ID=RLOC_00010965;geneIDs=FBgn0040346.3.path1;transcripts=FBgn0040346.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126724094	126726938	.	+	.	ID=FBgn0040346.3.mrna1;geneID=FBgn0040346.3.path1;Name=FBgn0040346.3;Dir=sensecoverage=100.0;identity=99.6;matches=1117;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010965
Chr1	stalkie_big_nohaplotig	exon	126724094	126724708	99	+	.	Parent=FBgn0040346.3.mrna1;Target=FBgn0040346.3 1 615 +
Chr1	stalkie_big_nohaplotig	exon	126724768	126724997	99	+	.	Parent=FBgn0040346.3.mrna1;Target=FBgn0040346.3 616 845 +
Chr1	stalkie_big_nohaplotig	exon	126726598	126726736	99	+	.	Parent=FBgn0040346.3.mrna1;Target=FBgn0040346.3 846 984 +
Chr1	stalkie_big_nohaplotig	exon	126726801	126726938	99	+	.	Parent=FBgn0040346.3.mrna1;Target=FBgn0040346.3 985 1122 +
Chr1	stalkie_big_nohaplotig	CDS	126724094	126724708	.	+	0	Parent=FBgn0040346.3.mrna1;Target=FBgn0040346.3 1 615 +
Chr1	stalkie_big_nohaplotig	CDS	126724768	126724997	.	+	0	Parent=FBgn0040346.3.mrna1;Target=FBgn0040346.3 616 845 +
Chr1	stalkie_big_nohaplotig	CDS	126726598	126726736	.	+	1	Parent=FBgn0040346.3.mrna1;Target=FBgn0040346.3 846 984 +
Chr1	stalkie_big_nohaplotig	CDS	126726801	126726938	.	+	0	Parent=FBgn0040346.3.mrna1;Target=FBgn0040346.3 985 1122 +
Chr1	gffcl	locus	126727217	126727780	.	-	.	ID=RLOC_00010966;geneIDs=comp151211_c0_seq1.path1;transcripts=comp151211_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126727217	126727780	.	-	.	ID=comp151211_c0_seq1.mrna1;geneID=comp151211_c0_seq1.path1;Name=comp151211_c0_seq1;Dir=indeterminatecoverage=95.1;identity=99.6;matches=562;mismatches=2;indels=0;unknowns=0;Target=comp151211_c0_seq1 565 2 .;CDS_Target=comp151211_c0_seq1 411 337 .;locus=RLOC_00010966
Chr1	stalkie_big_nohaplotig	exon	126727217	126727780	99	-	.	Parent=comp151211_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	126727371	126727445	.	-	0	Parent=comp151211_c0_seq1.mrna1
Chr1	gffcl	locus	126731628	126732974	.	+	.	ID=RLOC_00010967;geneIDs=comp163686_c0_seq1.path1;transcripts=comp163686_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126731628	126732974	.	+	.	ID=comp163686_c0_seq1.mrna1;geneID=comp163686_c0_seq1.path1;Name=comp163686_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=1316;mismatches=30;indels=4;unknowns=0;Target=comp163686_c0_seq1 1349 1 .;CDS_Target=comp163686_c0_seq1 1215 1075 .;locus=RLOC_00010967
Chr1	stalkie_big_nohaplotig	exon	126731628	126732974	97	+	.	Parent=comp163686_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	126732700	126732840	.	+	0	Parent=comp163686_c0_seq1.mrna1
Chr1	gffcl	locus	126734692	126738358	.	-	.	ID=RLOC_00010968;geneIDs=FBgn0052815.path1;transcripts=FBgn0052815.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126734692	126738358	.	-	.	ID=FBgn0052815.mrna1;geneID=FBgn0052815.path1;Name=FBgn0052815;Dir=sensecoverage=100.0;identity=100.0;matches=231;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010968
Chr1	stalkie_big_nohaplotig	exon	126734692	126734760	100	-	.	Parent=FBgn0052815.mrna1;Target=FBgn0052815 163 231 +
Chr1	stalkie_big_nohaplotig	exon	126738197	126738358	100	-	.	Parent=FBgn0052815.mrna1;Target=FBgn0052815 1 162 +
Chr1	stalkie_big_nohaplotig	CDS	126734692	126734760	.	-	0	Parent=FBgn0052815.mrna1;Target=FBgn0052815 163 231 +
Chr1	stalkie_big_nohaplotig	CDS	126738197	126738358	.	-	0	Parent=FBgn0052815.mrna1;Target=FBgn0052815 1 162 +
Chr1	gffcl	locus	126739453	126739924	.	+	.	ID=RLOC_00010969;geneIDs=comp74485_c0_seq1.path1;transcripts=comp74485_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126739453	126739924	.	+	.	ID=comp74485_c0_seq1.mrna1;geneID=comp74485_c0_seq1.path1;Name=comp74485_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.4;matches=469;mismatches=3;indels=0;unknowns=0;Target=comp74485_c0_seq1 472 1 .;CDS_Target=comp74485_c0_seq1 224 84 .;locus=RLOC_00010969
Chr1	stalkie_big_nohaplotig	exon	126739453	126739924	99	+	.	Parent=comp74485_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	126739536	126739676	.	+	0	Parent=comp74485_c0_seq1.mrna1
Chr1	gffcl	locus	126744058	126752851	.	+	.	ID=RLOC_00010970;geneIDs=FBgn0023537.1.path1;transcripts=FBgn0023537.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126744058	126752851	.	+	.	ID=FBgn0023537.1.mrna1;geneID=FBgn0023537.1.path1;Name=FBgn0023537.1;Dir=sensecoverage=100.0;identity=99.7;matches=1687;mismatches=5;indels=0;unknowns=0;locus=RLOC_00010970
Chr1	stalkie_big_nohaplotig	exon	126744058	126744219	99	+	.	Parent=FBgn0023537.1.mrna1;Target=FBgn0023537.1 1 162 +
Chr1	stalkie_big_nohaplotig	exon	126751246	126751600	100	+	.	Parent=FBgn0023537.1.mrna1;Target=FBgn0023537.1 163 517 +
Chr1	stalkie_big_nohaplotig	exon	126751677	126752851	99	+	.	Parent=FBgn0023537.1.mrna1;Target=FBgn0023537.1 518 1692 +
Chr1	stalkie_big_nohaplotig	CDS	126744058	126744219	.	+	0	Parent=FBgn0023537.1.mrna1;Target=FBgn0023537.1 1 162 +
Chr1	stalkie_big_nohaplotig	CDS	126751246	126751600	.	+	0	Parent=FBgn0023537.1.mrna1;Target=FBgn0023537.1 163 517 +
Chr1	stalkie_big_nohaplotig	CDS	126751677	126752851	.	+	2	Parent=FBgn0023537.1.mrna1;Target=FBgn0023537.1 518 1692 +
Chr1	gffcl	locus	126748860	126749918	.	+	.	ID=RLOC_00010971;geneIDs=FBgn0001942.1.path1;transcripts=FBgn0001942.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126748860	126749918	.	+	.	ID=FBgn0001942.1.mrna1;geneID=FBgn0001942.1.path1;Name=FBgn0001942.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1056;mismatches=3;indels=0;unknowns=0;Target=FBgn0001942.1 1059 1 .;locus=RLOC_00010971
Chr1	stalkie_big_nohaplotig	exon	126748860	126749918	99	+	.	Parent=FBgn0001942.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	126748860	126749918	.	+	0	Parent=FBgn0001942.1.mrna1
Chr1	gffcl	locus	126754479	126754731	.	-	.	ID=RLOC_00010972;geneIDs=comp48178_c0_seq1.path1;transcripts=comp48178_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126754479	126754731	.	-	.	ID=comp48178_c0_seq1.mrna1;geneID=comp48178_c0_seq1.path1;Name=comp48178_c0_seq1;Dir=indeterminatecoverage=91.0;identity=99.6;matches=253;mismatches=0;indels=1;unknowns=0;Target=comp48178_c0_seq1 271 18 .;CDS_Target=comp48178_c0_seq1 113 18 .;locus=RLOC_00010972
Chr1	stalkie_big_nohaplotig	exon	126754479	126754731	99	-	.	Parent=comp48178_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	126754636	126754731	.	-	0	Parent=comp48178_c0_seq1.mrna1
Chr1	gffcl	locus	126755373	126910862	.	-	.	ID=RLOC_00010973;geneIDs=FBgn0261451.1.path1,comp152756_c0_seq1.path1;transcripts=FBgn0261451.1.mrna1,comp152756_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126755373	126910862	.	-	.	ID=FBgn0261451.1.mrna1;geneID=FBgn0261451.1.path1;Name=FBgn0261451.1;Dir=sensecoverage=100.0;identity=99.7;matches=10763;mismatches=25;indels=9;unknowns=0;locus=RLOC_00010973
Chr1	stalkie_big_nohaplotig	exon	126755373	126755412	100	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 10749 10788 +
Chr1	stalkie_big_nohaplotig	exon	126758861	126759008	100	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 10601 10748 +
Chr1	stalkie_big_nohaplotig	exon	126759398	126759814	99	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 10184 10600 +
Chr1	stalkie_big_nohaplotig	exon	126759875	126760139	100	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 9919 10183 +
Chr1	stalkie_big_nohaplotig	exon	126760227	126760644	99	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 9501 9918 +
Chr1	stalkie_big_nohaplotig	exon	126761005	126761930	99	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 8575 9500 +
Chr1	stalkie_big_nohaplotig	exon	126762590	126762871	98	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 8293 8574 +
Chr1	stalkie_big_nohaplotig	exon	126762936	126763162	99	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 8066 8292 +
Chr1	stalkie_big_nohaplotig	exon	126776055	126776223	98	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 7897 8065 +
Chr1	stalkie_big_nohaplotig	exon	126777509	126777752	99	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 7653 7896 +
Chr1	stalkie_big_nohaplotig	exon	126777914	126778244	100	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 7322 7652 +
Chr1	stalkie_big_nohaplotig	exon	126778371	126778484	98	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 7208 7321 +
Chr1	stalkie_big_nohaplotig	exon	126780334	126780744	97	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 6806 7207 +
Chr1	stalkie_big_nohaplotig	exon	126780796	126780969	99	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 6632 6805 +
Chr1	stalkie_big_nohaplotig	exon	126782294	126782441	100	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 6484 6631 +
Chr1	stalkie_big_nohaplotig	exon	126782510	126782624	99	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 6369 6483 +
Chr1	stalkie_big_nohaplotig	exon	126782691	126783306	99	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 5753 6368 +
Chr1	stalkie_big_nohaplotig	exon	126783541	126783721	100	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 5572 5752 +
Chr1	stalkie_big_nohaplotig	exon	126783788	126783945	100	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 5414 5571 +
Chr1	stalkie_big_nohaplotig	exon	126786896	126787979	100	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 4330 5413 +
Chr1	stalkie_big_nohaplotig	exon	126788050	126788481	100	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 3898 4329 +
Chr1	stalkie_big_nohaplotig	exon	126788556	126790354	100	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 2099 3897 +
Chr1	stalkie_big_nohaplotig	exon	126790575	126790961	100	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 1712 2098 +
Chr1	stalkie_big_nohaplotig	exon	126791354	126791447	100	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 1618 1711 +
Chr1	stalkie_big_nohaplotig	exon	126791511	126791644	100	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 1484 1617 +
Chr1	stalkie_big_nohaplotig	exon	126794140	126794211	100	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 1412 1483 +
Chr1	stalkie_big_nohaplotig	exon	126795368	126795601	99	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 1178 1411 +
Chr1	stalkie_big_nohaplotig	exon	126799456	126799722	100	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 911 1177 +
Chr1	stalkie_big_nohaplotig	exon	126817291	126817401	100	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 800 910 +
Chr1	stalkie_big_nohaplotig	exon	126906783	126906890	100	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 692 799 +
Chr1	stalkie_big_nohaplotig	exon	126907568	126907855	100	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 404 691 +
Chr1	stalkie_big_nohaplotig	exon	126910460	126910862	99	-	.	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 1 403 +
Chr1	stalkie_big_nohaplotig	CDS	126755373	126755412	.	-	1	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 10749 10788 +
Chr1	stalkie_big_nohaplotig	CDS	126758861	126759008	.	-	2	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 10601 10748 +
Chr1	stalkie_big_nohaplotig	CDS	126759398	126759814	.	-	2	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 10184 10600 +
Chr1	stalkie_big_nohaplotig	CDS	126759875	126760139	.	-	0	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 9919 10183 +
Chr1	stalkie_big_nohaplotig	CDS	126760227	126760644	.	-	1	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 9501 9918 +
Chr1	stalkie_big_nohaplotig	CDS	126761005	126761930	.	-	0	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 8575 9500 +
Chr1	stalkie_big_nohaplotig	CDS	126762590	126762871	.	-	0	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 8293 8574 +
Chr1	stalkie_big_nohaplotig	CDS	126762936	126763162	.	-	2	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 8066 8292 +
Chr1	stalkie_big_nohaplotig	CDS	126776055	126776223	.	-	0	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 7897 8065 +
Chr1	stalkie_big_nohaplotig	CDS	126777509	126777752	.	-	1	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 7653 7896 +
Chr1	stalkie_big_nohaplotig	CDS	126777914	126778244	.	-	2	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 7322 7652 +
Chr1	stalkie_big_nohaplotig	CDS	126778371	126778484	.	-	2	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 7208 7321 +
Chr1	stalkie_big_nohaplotig	CDS	126780334	126780744	.	-	2	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 6806 7207 +
Chr1	stalkie_big_nohaplotig	CDS	126780796	126780969	.	-	2	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 6632 6805 +
Chr1	stalkie_big_nohaplotig	CDS	126782294	126782441	.	-	0	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 6484 6631 +
Chr1	stalkie_big_nohaplotig	CDS	126782510	126782624	.	-	1	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 6369 6483 +
Chr1	stalkie_big_nohaplotig	CDS	126782691	126783306	.	-	2	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 5753 6368 +
Chr1	stalkie_big_nohaplotig	CDS	126783541	126783721	.	-	0	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 5572 5752 +
Chr1	stalkie_big_nohaplotig	CDS	126783788	126783945	.	-	2	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 5414 5571 +
Chr1	stalkie_big_nohaplotig	CDS	126786896	126787979	.	-	0	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 4330 5413 +
Chr1	stalkie_big_nohaplotig	CDS	126788050	126788481	.	-	0	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 3898 4329 +
Chr1	stalkie_big_nohaplotig	CDS	126788556	126790354	.	-	2	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 2099 3897 +
Chr1	stalkie_big_nohaplotig	CDS	126790575	126790961	.	-	2	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 1712 2098 +
Chr1	stalkie_big_nohaplotig	CDS	126791354	126791447	.	-	0	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 1618 1711 +
Chr1	stalkie_big_nohaplotig	CDS	126791511	126791644	.	-	2	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 1484 1617 +
Chr1	stalkie_big_nohaplotig	CDS	126794140	126794211	.	-	2	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 1412 1483 +
Chr1	stalkie_big_nohaplotig	CDS	126795368	126795601	.	-	2	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 1178 1411 +
Chr1	stalkie_big_nohaplotig	CDS	126799456	126799722	.	-	2	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 911 1177 +
Chr1	stalkie_big_nohaplotig	CDS	126817291	126817401	.	-	2	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 800 910 +
Chr1	stalkie_big_nohaplotig	CDS	126906783	126906890	.	-	2	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 692 799 +
Chr1	stalkie_big_nohaplotig	CDS	126907568	126907855	.	-	2	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 404 691 +
Chr1	stalkie_big_nohaplotig	CDS	126910460	126910862	.	-	0	Parent=FBgn0261451.1.mrna1;Target=FBgn0261451.1 1 403 +
Chr1	stalkie_big_nohaplotig	mRNA	126811018	126817312	.	-	.	ID=comp152756_c0_seq1.mrna1;geneID=comp152756_c0_seq1.path1;Name=comp152756_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=470;mismatches=1;indels=0;unknowns=0;locus=RLOC_00010973
Chr1	stalkie_big_nohaplotig	exon	126811018	126811466	99	-	.	Parent=comp152756_c0_seq1.mrna1;Target=comp152756_c0_seq1 23 471 +
Chr1	stalkie_big_nohaplotig	exon	126817291	126817312	100	-	.	Parent=comp152756_c0_seq1.mrna1;Target=comp152756_c0_seq1 1 22 +
Chr1	stalkie_big_nohaplotig	CDS	126811048	126811466	.	-	2	Parent=comp152756_c0_seq1.mrna1;Target=comp152756_c0_seq1 23 441 +
Chr1	stalkie_big_nohaplotig	CDS	126817291	126817312	.	-	0	Parent=comp152756_c0_seq1.mrna1;Target=comp152756_c0_seq1 1 22 +
Chr1	gffcl	locus	126757517	126757788	.	-	.	ID=RLOC_00010974;geneIDs=comp152695_c1_seq1.path1;transcripts=comp152695_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126757517	126757788	.	-	.	ID=comp152695_c1_seq1.mrna1;geneID=comp152695_c1_seq1.path1;Name=comp152695_c1_seq1;Dir=indeterminatecoverage=66.2;identity=100.0;matches=272;mismatches=0;indels=0;unknowns=0;Target=comp152695_c1_seq1 272 1 .;CDS_Target=comp152695_c1_seq1 267 175 .;locus=RLOC_00010974
Chr1	stalkie_big_nohaplotig	exon	126757517	126757788	100	-	.	Parent=comp152695_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	126757522	126757614	.	-	0	Parent=comp152695_c1_seq1.mrna1
Chr1	gffcl	locus	126766847	126767755	.	-	.	ID=RLOC_00010975;geneIDs=comp153262_c0_seq1.path1;transcripts=comp153262_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126766847	126767755	.	-	.	ID=comp153262_c0_seq1.mrna1;geneID=comp153262_c0_seq1.path1;Name=comp153262_c0_seq1;Dir=antisensecoverage=94.1;identity=99.8;matches=842;mismatches=1;indels=1;unknowns=0;locus=RLOC_00010975
Chr1	stalkie_big_nohaplotig	exon	126766847	126766924	100	-	.	Parent=comp153262_c0_seq1.mrna1;Target=comp153262_c0_seq1 33 110 -
Chr1	stalkie_big_nohaplotig	exon	126766991	126767755	99	-	.	Parent=comp153262_c0_seq1.mrna1;Target=comp153262_c0_seq1 111 876 -
Chr1	stalkie_big_nohaplotig	CDS	126766859	126766924	.	-	0	Parent=comp153262_c0_seq1.mrna1;Target=comp153262_c0_seq1 45 110 .
Chr1	stalkie_big_nohaplotig	CDS	126766991	126767230	.	-	0	Parent=comp153262_c0_seq1.mrna1;Target=comp153262_c0_seq1 111 350 .
Chr1	gffcl	locus	126769138	126770252	.	-	.	ID=RLOC_00010976;geneIDs=comp153454_c0_seq1.path1;transcripts=comp153454_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126769138	126770252	.	-	.	ID=comp153454_c0_seq1.mrna1;geneID=comp153454_c0_seq1.path1;Name=comp153454_c0_seq1;Dir=indeterminatecoverage=96.6;identity=89.8;matches=1036;mismatches=45;indels=73;unknowns=0;Target=comp153454_c0_seq1 1159 40 .;CDS_Target=comp153454_c0_seq1 1029 1021 .;locus=RLOC_00010976
Chr1	stalkie_big_nohaplotig	exon	126769138	126770252	89	-	.	Parent=comp153454_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	126769263	126769271	.	-	0	Parent=comp153454_c0_seq1.mrna1
Chr1	gffcl	locus	126775048	126775388	.	+	.	ID=RLOC_00010977;geneIDs=comp1106093_c0_seq1.path1;transcripts=comp1106093_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126775048	126775388	.	+	.	ID=comp1106093_c0_seq1.mrna1;geneID=comp1106093_c0_seq1.path1;Name=comp1106093_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.8;matches=331;mismatches=2;indels=16;unknowns=0;Target=comp1106093_c0_seq1 341 1 .;CDS_Target=comp1106093_c0_seq1 102 1 .;locus=RLOC_00010977
Chr1	stalkie_big_nohaplotig	exon	126775048	126775388	94	+	.	Parent=comp1106093_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	126775048	126775149	.	+	0	Parent=comp1106093_c0_seq1.mrna1
Chr1	gffcl	locus	126910962	126996518	.	-	.	ID=RLOC_00010978;geneIDs=ORF1086.path1;transcripts=ORF1086.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	126910962	126996518	.	-	.	ID=ORF1086.mrna1;geneID=ORF1086.path1;Name=ORF1086;Dir=sensecoverage=100.0;identity=99.4;matches=1235;mismatches=7;indels=0;unknowns=0;locus=RLOC_00010978
Chr1	stalkie_big_nohaplotig	exon	126910962	126911218	98	-	.	Parent=ORF1086.mrna1;Target=ORF1086 986 1242 +
Chr1	stalkie_big_nohaplotig	exon	126912049	126912212	98	-	.	Parent=ORF1086.mrna1;Target=ORF1086 822 985 +
Chr1	stalkie_big_nohaplotig	exon	126913302	126913479	100	-	.	Parent=ORF1086.mrna1;Target=ORF1086 644 821 +
Chr1	stalkie_big_nohaplotig	exon	126913541	126914030	99	-	.	Parent=ORF1086.mrna1;Target=ORF1086 154 643 +
Chr1	stalkie_big_nohaplotig	exon	126996366	126996518	100	-	.	Parent=ORF1086.mrna1;Target=ORF1086 1 153 +
Chr1	stalkie_big_nohaplotig	CDS	126910962	126911218	.	-	2	Parent=ORF1086.mrna1;Target=ORF1086 986 1242 +
Chr1	stalkie_big_nohaplotig	CDS	126912049	126912212	.	-	1	Parent=ORF1086.mrna1;Target=ORF1086 822 985 +
Chr1	stalkie_big_nohaplotig	CDS	126913302	126913479	.	-	2	Parent=ORF1086.mrna1;Target=ORF1086 644 821 +
Chr1	stalkie_big_nohaplotig	CDS	126913541	126914030	.	-	0	Parent=ORF1086.mrna1;Target=ORF1086 154 643 +
Chr1	stalkie_big_nohaplotig	CDS	126996366	126996518	.	-	0	Parent=ORF1086.mrna1;Target=ORF1086 1 153 +
Chr1	gffcl	locus	127152607	127153812	.	+	.	ID=RLOC_00010979;geneIDs=comp158237_c0_seq1.path1;transcripts=comp158237_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127152607	127153812	.	+	.	ID=comp158237_c0_seq1.mrna1;geneID=comp158237_c0_seq1.path1;Name=comp158237_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.1;matches=1133;mismatches=16;indels=6;unknowns=0;Target=comp158237_c0_seq1 282 211 .;locus=RLOC_00010979
Chr1	stalkie_big_nohaplotig	exon	127152607	127152676	92	+	.	Parent=comp158237_c0_seq1.mrna1;Target=comp158237_c0_seq1 70 1 .
Chr1	stalkie_big_nohaplotig	exon	127152732	127153812	98	+	.	Parent=comp158237_c0_seq1.mrna1;Target=comp158237_c0_seq1 1153 71 .
Chr1	stalkie_big_nohaplotig	CDS	127152871	127152942	.	+	0	Parent=comp158237_c0_seq1.mrna1
Chr1	gffcl	locus	127155500	127156028	.	+	.	ID=RLOC_00010980;geneIDs=comp157625_c0_seq1.path1;transcripts=comp157625_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127155500	127156028	.	+	.	ID=comp157625_c0_seq1.mrna1;geneID=comp157625_c0_seq1.path1;Name=comp157625_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=521;mismatches=7;indels=2;unknowns=0;Target=comp157625_c0_seq1 529 1 .;CDS_Target=comp157625_c0_seq1 148 2 .;locus=RLOC_00010980
Chr1	stalkie_big_nohaplotig	exon	127155500	127156028	98	+	.	Parent=comp157625_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	127155501	127155647	.	+	0	Parent=comp157625_c0_seq1.mrna1
Chr1	gffcl	locus	127159348	127160498	.	-	.	ID=RLOC_00010981;geneIDs=comp157003_c0_seq1.path1;transcripts=comp157003_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127159348	127160498	.	-	.	ID=comp157003_c0_seq1.mrna1;geneID=comp157003_c0_seq1.path1;Name=comp157003_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1141;mismatches=10;indels=0;unknowns=0;Target=comp157003_c0_seq1 1151 1 .;CDS_Target=comp157003_c0_seq1 242 72 .;locus=RLOC_00010981
Chr1	stalkie_big_nohaplotig	exon	127159348	127160498	99	-	.	Parent=comp157003_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	127160257	127160427	.	-	0	Parent=comp157003_c0_seq1.mrna1
Chr1	gffcl	locus	127162690	127162910	.	+	.	ID=RLOC_00010982;geneIDs=comp73567_c0_seq1.path1;transcripts=comp73567_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127162690	127162910	.	+	.	ID=comp73567_c0_seq1.mrna1;geneID=comp73567_c0_seq1.path1;Name=comp73567_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.5;matches=220;mismatches=1;indels=0;unknowns=0;Target=comp73567_c0_seq1 221 1 .;CDS_Target=comp73567_c0_seq1 107 3 .;locus=RLOC_00010982
Chr1	stalkie_big_nohaplotig	exon	127162690	127162910	99	+	.	Parent=comp73567_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	127162692	127162796	.	+	0	Parent=comp73567_c0_seq1.mrna1
Chr1	gffcl	locus	127185626	127208936	.	-	.	ID=RLOC_00010983;geneIDs=FBgn0040388.1.path1;transcripts=FBgn0040388.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127185626	127208936	.	-	.	ID=FBgn0040388.1.mrna1;geneID=FBgn0040388.1.path1;Name=FBgn0040388.1;Dir=sensecoverage=99.6;identity=99.0;matches=2091;mismatches=22;indels=0;unknowns=0;locus=RLOC_00010983
Chr1	stalkie_big_nohaplotig	exon	127185626	127186288	99	-	.	Parent=FBgn0040388.1.mrna1;Target=FBgn0040388.1 1451 2113 +
Chr1	stalkie_big_nohaplotig	exon	127205273	127205411	99	-	.	Parent=FBgn0040388.1.mrna1;Target=FBgn0040388.1 1312 1450 +
Chr1	stalkie_big_nohaplotig	exon	127205523	127206482	98	-	.	Parent=FBgn0040388.1.mrna1;Target=FBgn0040388.1 352 1311 +
Chr1	stalkie_big_nohaplotig	exon	127208586	127208936	99	-	.	Parent=FBgn0040388.1.mrna1;Target=FBgn0040388.1 1 351 +
Chr1	stalkie_big_nohaplotig	CDS	127185627	127186288	.	-	2	Parent=FBgn0040388.1.mrna1;Target=FBgn0040388.1 1451 2112 +
Chr1	stalkie_big_nohaplotig	CDS	127205273	127205411	.	-	0	Parent=FBgn0040388.1.mrna1;Target=FBgn0040388.1 1312 1450 +
Chr1	stalkie_big_nohaplotig	CDS	127205523	127206482	.	-	0	Parent=FBgn0040388.1.mrna1;Target=FBgn0040388.1 352 1311 +
Chr1	stalkie_big_nohaplotig	CDS	127208586	127208936	.	-	0	Parent=FBgn0040388.1.mrna1;Target=FBgn0040388.1 1 351 +
Chr1	gffcl	locus	127191709	127192592	.	-	.	ID=RLOC_00010984;geneIDs=Dv_FBgn0206941.2.path8;transcripts=Dv_FBgn0206941.2.mrna8
Chr1	stalkie_big_nohaplotig	mRNA	127191709	127192592	.	-	.	ID=Dv_FBgn0206941.2.mrna8;geneID=Dv_FBgn0206941.2.path8;Name=Dv_FBgn0206941.2;Dir=indeterminatecoverage=100.0;identity=99.5;matches=881;mismatches=3;indels=1;unknowns=0;Target=Dv_FBgn0206941.2 885 1 .;CDS_Target=Dv_FBgn0206941.2 885 178 .;locus=RLOC_00010984
Chr1	stalkie_big_nohaplotig	exon	127191709	127192592	99	-	.	Parent=Dv_FBgn0206941.2.mrna8
Chr1	stalkie_big_nohaplotig	CDS	127191709	127192416	.	-	0	Parent=Dv_FBgn0206941.2.mrna8
Chr1	gffcl	locus	127197207	127203371	.	+	.	ID=RLOC_00010985;geneIDs=FBgn0004050.1.path1;transcripts=FBgn0004050.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127197207	127203371	.	+	.	ID=FBgn0004050.1.mrna1;geneID=FBgn0004050.1.path1;Name=FBgn0004050.1;Dir=sensecoverage=100.0;identity=99.8;matches=1207;mismatches=2;indels=0;unknowns=0;locus=RLOC_00010985
Chr1	stalkie_big_nohaplotig	exon	127197207	127197733	99	+	.	Parent=FBgn0004050.1.mrna1;Target=FBgn0004050.1 1 527 +
Chr1	stalkie_big_nohaplotig	exon	127202615	127203033	99	+	.	Parent=FBgn0004050.1.mrna1;Target=FBgn0004050.1 528 946 +
Chr1	stalkie_big_nohaplotig	exon	127203109	127203371	100	+	.	Parent=FBgn0004050.1.mrna1;Target=FBgn0004050.1 947 1209 +
Chr1	stalkie_big_nohaplotig	CDS	127197207	127197733	.	+	0	Parent=FBgn0004050.1.mrna1;Target=FBgn0004050.1 1 527 +
Chr1	stalkie_big_nohaplotig	CDS	127202615	127203033	.	+	1	Parent=FBgn0004050.1.mrna1;Target=FBgn0004050.1 528 946 +
Chr1	stalkie_big_nohaplotig	CDS	127203109	127203371	.	+	2	Parent=FBgn0004050.1.mrna1;Target=FBgn0004050.1 947 1209 +
Chr1	gffcl	locus	127305482	127309622	.	+	.	ID=RLOC_00010987;geneIDs=comp577569_c0_seq1.path1;transcripts=comp577569_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127305482	127309622	.	+	.	ID=comp577569_c0_seq1.mrna1;geneID=comp577569_c0_seq1.path1;Name=comp577569_c0_seq1;Dir=indeterminatecoverage=85.7;identity=100.0;matches=186;mismatches=0;indels=0;unknowns=0;locus=RLOC_00010987
Chr1	stalkie_big_nohaplotig	exon	127305482	127305491	100	+	.	Parent=comp577569_c0_seq1.mrna1;Target=comp577569_c0_seq1 41 32 .
Chr1	stalkie_big_nohaplotig	exon	127309447	127309622	100	+	.	Parent=comp577569_c0_seq1.mrna1;Target=comp577569_c0_seq1 217 42 .
Chr1	stalkie_big_nohaplotig	CDS	127305484	127305491	.	+	0	Parent=comp577569_c0_seq1.mrna1;Target=comp577569_c0_seq1 41 34 .
Chr1	stalkie_big_nohaplotig	CDS	127309447	127309504	.	+	1	Parent=comp577569_c0_seq1.mrna1;Target=comp577569_c0_seq1 99 42 .
Chr1	gffcl	locus	127309652	127310344	.	-	.	ID=RLOC_00010988;geneIDs=comp130914_c0_seq1.path1;transcripts=comp130914_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127309652	127310344	.	-	.	ID=comp130914_c0_seq1.mrna1;geneID=comp130914_c0_seq1.path1;Name=comp130914_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=686;mismatches=5;indels=4;unknowns=0;Target=comp130914_c0_seq1 693 1 .;CDS_Target=comp130914_c0_seq1 415 308 .;locus=RLOC_00010988
Chr1	stalkie_big_nohaplotig	exon	127309652	127310344	98	-	.	Parent=comp130914_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	127309928	127310037	.	-	0	Parent=comp130914_c0_seq1.mrna1
Chr1	gffcl	locus	127310845	127311657	.	-	.	ID=RLOC_00010989;geneIDs=comp160616_c0_seq1.path1;transcripts=comp160616_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127310845	127311657	.	-	.	ID=comp160616_c0_seq1.mrna1;geneID=comp160616_c0_seq1.path1;Name=comp160616_c0_seq1;Dir=indeterminatecoverage=97.4;identity=89.1;matches=732;mismatches=52;indels=38;unknowns=0;Target=comp160616_c0_seq1 806 14 .;CDS_Target=comp160616_c0_seq1 442 404 .;locus=RLOC_00010989
Chr1	stalkie_big_nohaplotig	exon	127310845	127311657	89	-	.	Parent=comp160616_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	127311206	127311243	.	-	0	Parent=comp160616_c0_seq1.mrna1
Chr1	gffcl	locus	127312228	127312573	.	+	.	ID=RLOC_00010990;geneIDs=comp156455_c0_seq1.path1;transcripts=comp156455_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127312228	127312573	.	+	.	ID=comp156455_c0_seq1.mrna1;geneID=comp156455_c0_seq1.path1;Name=comp156455_c0_seq1;Dir=indeterminatecoverage=100.0;identity=88.7;matches=307;mismatches=4;indels=35;unknowns=0;Target=comp156455_c0_seq1 311 1 .;CDS_Target=comp156455_c0_seq1 202 89 .;locus=RLOC_00010990
Chr1	stalkie_big_nohaplotig	exon	127312228	127312573	88	+	.	Parent=comp156455_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	127312316	127312429	.	+	0	Parent=comp156455_c0_seq1.mrna1
Chr1	gffcl	locus	127314058	127314512	.	-	.	ID=RLOC_00010991;geneIDs=comp153336_c0_seq1.path1;transcripts=comp153336_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127314058	127314512	.	-	.	ID=comp153336_c0_seq1.mrna1;geneID=comp153336_c0_seq1.path1;Name=comp153336_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=446;mismatches=9;indels=0;unknowns=0;Target=comp153336_c0_seq1 455 1 .;CDS_Target=comp153336_c0_seq1 195 109 .;locus=RLOC_00010991
Chr1	stalkie_big_nohaplotig	exon	127314058	127314512	98	-	.	Parent=comp153336_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	127314318	127314404	.	-	0	Parent=comp153336_c0_seq1.mrna1
Chr1	gffcl	locus	127332140	127335034	.	+	.	ID=RLOC_00010992;geneIDs=FBgn0038578.2.path1;transcripts=FBgn0038578.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127332140	127335034	.	+	.	ID=FBgn0038578.2.mrna1;geneID=FBgn0038578.2.path1;Name=FBgn0038578.2;Dir=sensecoverage=100.0;identity=98.2;matches=2464;mismatches=32;indels=12;unknowns=0;locus=RLOC_00010992
Chr1	stalkie_big_nohaplotig	exon	127332140	127332330	98	+	.	Parent=FBgn0038578.2.mrna1;Target=FBgn0038578.2 1 191 +
Chr1	stalkie_big_nohaplotig	exon	127332385	127332905	96	+	.	Parent=FBgn0038578.2.mrna1;Target=FBgn0038578.2 192 724 +
Chr1	stalkie_big_nohaplotig	exon	127332999	127333112	97	+	.	Parent=FBgn0038578.2.mrna1;Target=FBgn0038578.2 725 838 +
Chr1	stalkie_big_nohaplotig	exon	127333173	127333810	99	+	.	Parent=FBgn0038578.2.mrna1;Target=FBgn0038578.2 839 1476 +
Chr1	stalkie_big_nohaplotig	exon	127333874	127334442	98	+	.	Parent=FBgn0038578.2.mrna1;Target=FBgn0038578.2 1477 2045 +
Chr1	stalkie_big_nohaplotig	exon	127334497	127334875	98	+	.	Parent=FBgn0038578.2.mrna1;Target=FBgn0038578.2 2046 2424 +
Chr1	stalkie_big_nohaplotig	exon	127334951	127335034	100	+	.	Parent=FBgn0038578.2.mrna1;Target=FBgn0038578.2 2425 2508 +
Chr1	stalkie_big_nohaplotig	CDS	127332140	127332330	.	+	0	Parent=FBgn0038578.2.mrna1;Target=FBgn0038578.2 1 191 +
Chr1	stalkie_big_nohaplotig	CDS	127332385	127332905	.	+	1	Parent=FBgn0038578.2.mrna1;Target=FBgn0038578.2 192 724 +
Chr1	stalkie_big_nohaplotig	CDS	127332999	127333112	.	+	2	Parent=FBgn0038578.2.mrna1;Target=FBgn0038578.2 725 838 +
Chr1	stalkie_big_nohaplotig	CDS	127333173	127333810	.	+	2	Parent=FBgn0038578.2.mrna1;Target=FBgn0038578.2 839 1476 +
Chr1	stalkie_big_nohaplotig	CDS	127333874	127334442	.	+	0	Parent=FBgn0038578.2.mrna1;Target=FBgn0038578.2 1477 2045 +
Chr1	stalkie_big_nohaplotig	CDS	127334497	127334875	.	+	1	Parent=FBgn0038578.2.mrna1;Target=FBgn0038578.2 2046 2424 +
Chr1	stalkie_big_nohaplotig	CDS	127334951	127335034	.	+	0	Parent=FBgn0038578.2.mrna1;Target=FBgn0038578.2 2425 2508 +
Chr1	gffcl	locus	127505328	127528528	.	+	.	ID=RLOC_00010994;geneIDs=FBgn0027601.1.path1;transcripts=FBgn0027601.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127505328	127528528	.	+	.	ID=FBgn0027601.1.mrna1;geneID=FBgn0027601.1.path1;Name=FBgn0027601.1;Dir=sensecoverage=100.0;identity=99.3;matches=1811;mismatches=12;indels=1;unknowns=0;locus=RLOC_00010994
Chr1	stalkie_big_nohaplotig	exon	127505328	127505636	99	+	.	Parent=FBgn0027601.1.mrna1;Target=FBgn0027601.1 1 309 +
Chr1	stalkie_big_nohaplotig	exon	127521409	127521619	99	+	.	Parent=FBgn0027601.1.mrna1;Target=FBgn0027601.1 310 520 +
Chr1	stalkie_big_nohaplotig	exon	127527108	127527641	99	+	.	Parent=FBgn0027601.1.mrna1;Target=FBgn0027601.1 521 1054 +
Chr1	stalkie_big_nohaplotig	exon	127527699	127527813	100	+	.	Parent=FBgn0027601.1.mrna1;Target=FBgn0027601.1 1055 1169 +
Chr1	stalkie_big_nohaplotig	exon	127527875	127528528	98	+	.	Parent=FBgn0027601.1.mrna1;Target=FBgn0027601.1 1170 1824 +
Chr1	stalkie_big_nohaplotig	CDS	127505328	127505636	.	+	0	Parent=FBgn0027601.1.mrna1;Target=FBgn0027601.1 1 309 +
Chr1	stalkie_big_nohaplotig	CDS	127521409	127521619	.	+	0	Parent=FBgn0027601.1.mrna1;Target=FBgn0027601.1 310 520 +
Chr1	stalkie_big_nohaplotig	CDS	127527108	127527641	.	+	2	Parent=FBgn0027601.1.mrna1;Target=FBgn0027601.1 521 1054 +
Chr1	stalkie_big_nohaplotig	CDS	127527699	127527813	.	+	2	Parent=FBgn0027601.1.mrna1;Target=FBgn0027601.1 1055 1169 +
Chr1	stalkie_big_nohaplotig	CDS	127527875	127528528	.	+	1	Parent=FBgn0027601.1.mrna1;Target=FBgn0027601.1 1170 1824 +
Chr1	gffcl	locus	127522633	127524883	.	+	.	ID=RLOC_00010995;geneIDs=comp160611_c3_seq1.path1;transcripts=comp160611_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127522633	127524883	.	+	.	ID=comp160611_c3_seq1.mrna1;geneID=comp160611_c3_seq1.path1;Name=comp160611_c3_seq1;Dir=indeterminatecoverage=89.6;identity=98.2;matches=2160;mismatches=29;indels=11;unknowns=0;Target=comp160611_c3_seq1 249 1 .;locus=RLOC_00010995
Chr1	stalkie_big_nohaplotig	exon	127522633	127523046	97	+	.	Parent=comp160611_c3_seq1.mrna1;Target=comp160611_c3_seq1 414 1 .
Chr1	stalkie_big_nohaplotig	exon	127523109	127524883	98	+	.	Parent=comp160611_c3_seq1.mrna1;Target=comp160611_c3_seq1 2200 415 .
Chr1	stalkie_big_nohaplotig	CDS	127522633	127522881	.	+	0	Parent=comp160611_c3_seq1.mrna1
Chr1	gffcl	locus	127525259	127526824	.	-	.	ID=RLOC_00010996;geneIDs=comp157915_c0_seq1.path1;transcripts=comp157915_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127525259	127526824	.	-	.	ID=comp157915_c0_seq1.mrna1;geneID=comp157915_c0_seq1.path1;Name=comp157915_c0_seq1;Dir=indeterminatecoverage=98.3;identity=95.6;matches=1502;mismatches=46;indels=23;unknowns=0;Target=comp157915_c0_seq1 1580 28 .;CDS_Target=comp157915_c0_seq1 450 349 .;locus=RLOC_00010996
Chr1	stalkie_big_nohaplotig	exon	127525259	127526824	95	-	.	Parent=comp157915_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	127526403	127526503	.	-	0	Parent=comp157915_c0_seq1.mrna1
Chr1	gffcl	locus	127535587	129087050	.	+	.	ID=RLOC_00010997;geneIDs=comp147720_c1_seq1.path1;transcripts=comp147720_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127535587	129087050	.	+	.	ID=comp147720_c1_seq1.mrna1;geneID=comp147720_c1_seq1.path1;Name=comp147720_c1_seq1;Dir=indeterminatecoverage=85.3;identity=95.7;matches=653;mismatches=27;indels=2;unknowns=0;Target=comp147720_c1_seq1 190 62 .;locus=RLOC_00010997
Chr1	stalkie_big_nohaplotig	exon	127535587	127536032	99	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 505 60 .
Chr1	stalkie_big_nohaplotig	exon	128947169	128947189	90	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 524 506 .
Chr1	stalkie_big_nohaplotig	exon	128947237	128947242	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 569 564 .
Chr1	stalkie_big_nohaplotig	exon	128947415	128947418	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 573 570 .
Chr1	stalkie_big_nohaplotig	exon	128963466	128963471	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 579 574 .
Chr1	stalkie_big_nohaplotig	exon	128963721	128963724	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 583 580 .
Chr1	stalkie_big_nohaplotig	exon	128971716	128971721	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 589 584 .
Chr1	stalkie_big_nohaplotig	exon	128972165	128972172	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 597 590 .
Chr1	stalkie_big_nohaplotig	exon	128972178	128972180	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 621 619 .
Chr1	stalkie_big_nohaplotig	exon	128972632	128972635	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 625 622 .
Chr1	stalkie_big_nohaplotig	exon	128975993	128975994	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 627 626 .
Chr1	stalkie_big_nohaplotig	exon	128982425	128982427	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 630 628 .
Chr1	stalkie_big_nohaplotig	exon	128997382	128997383	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 632 631 .
Chr1	stalkie_big_nohaplotig	exon	128999900	128999904	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 637 633 .
Chr1	stalkie_big_nohaplotig	exon	129014498	129014508	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 648 638 .
Chr1	stalkie_big_nohaplotig	exon	129014516	129014520	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 664 660 .
Chr1	stalkie_big_nohaplotig	exon	129020409	129020456	45	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 712 665 .
Chr1	stalkie_big_nohaplotig	exon	129022795	129022796	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 714 713 .
Chr1	stalkie_big_nohaplotig	exon	129036556	129036563	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 722 715 .
Chr1	stalkie_big_nohaplotig	exon	129048776	129048786	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 733 723 .
Chr1	stalkie_big_nohaplotig	exon	129050690	129050694	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 740 736 .
Chr1	stalkie_big_nohaplotig	exon	129053693	129053699	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 747 741 .
Chr1	stalkie_big_nohaplotig	exon	129054609	129054615	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 754 748 .
Chr1	stalkie_big_nohaplotig	exon	129055589	129055597	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 763 755 .
Chr1	stalkie_big_nohaplotig	exon	129055643	129055644	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 805 804 .
Chr1	stalkie_big_nohaplotig	exon	129069984	129069987	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 809 806 .
Chr1	stalkie_big_nohaplotig	exon	129070947	129070953	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 816 810 .
Chr1	stalkie_big_nohaplotig	exon	129078563	129078567	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 821 817 .
Chr1	stalkie_big_nohaplotig	exon	129078802	129078803	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 823 822 .
Chr1	stalkie_big_nohaplotig	exon	129084531	129084539	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 832 824 .
Chr1	stalkie_big_nohaplotig	exon	129086683	129086685	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 835 833 .
Chr1	stalkie_big_nohaplotig	exon	129087034	129087050	100	+	.	Parent=comp147720_c1_seq1.mrna1;Target=comp147720_c1_seq1 852 836 .
Chr1	stalkie_big_nohaplotig	CDS	127535589	127535717	.	+	0	Parent=comp147720_c1_seq1.mrna1
Chr1	gffcl	locus	127537751	127538131	.	+	.	ID=RLOC_00010999;geneIDs=comp148043_c0_seq1.path1;transcripts=comp148043_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127537751	127538131	.	+	.	ID=comp148043_c0_seq1.mrna1;geneID=comp148043_c0_seq1.path1;Name=comp148043_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.0;matches=362;mismatches=19;indels=0;unknowns=0;Target=comp148043_c0_seq1 381 1 .;CDS_Target=comp148043_c0_seq1 244 125 .;locus=RLOC_00010999
Chr1	stalkie_big_nohaplotig	exon	127537751	127538131	95	+	.	Parent=comp148043_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	127537875	127537994	.	+	0	Parent=comp148043_c0_seq1.mrna1
Chr1	gffcl	locus	127550930	127559469	.	-	.	ID=RLOC_00011000;geneIDs=comp152543_c0_seq1.path1;transcripts=comp152543_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127550930	127559469	.	-	.	ID=comp152543_c0_seq1.mrna1;geneID=comp152543_c0_seq1.path1;Name=comp152543_c0_seq1;Dir=sensecoverage=100.0;identity=99.0;matches=597;mismatches=0;indels=6;unknowns=0;Target=comp152543_c0_seq1 280 603 +;locus=RLOC_00011000
Chr1	stalkie_big_nohaplotig	exon	127550930	127551421	99	-	.	Parent=comp152543_c0_seq1.mrna1;Target=comp152543_c0_seq1 108 603 +
Chr1	stalkie_big_nohaplotig	exon	127559365	127559469	98	-	.	Parent=comp152543_c0_seq1.mrna1;Target=comp152543_c0_seq1 1 107 +
Chr1	stalkie_big_nohaplotig	CDS	127550930	127551253	.	-	0	Parent=comp152543_c0_seq1.mrna1
Chr1	gffcl	locus	127595635	127595916	.	+	.	ID=RLOC_00011001;geneIDs=comp159248_c0_seq1.path1;transcripts=comp159248_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127595635	127595916	.	+	.	ID=comp159248_c0_seq1.mrna1;geneID=comp159248_c0_seq1.path1;Name=comp159248_c0_seq1;Dir=indeterminatecoverage=19.8;identity=99.6;matches=281;mismatches=1;indels=0;unknowns=0;Target=comp159248_c0_seq1 282 1 .;CDS_Target=comp159248_c0_seq1 282 170 .;locus=RLOC_00011001
Chr1	stalkie_big_nohaplotig	exon	127595635	127595916	99	+	.	Parent=comp159248_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	127595804	127595916	.	+	0	Parent=comp159248_c0_seq1.mrna1
Chr1	gffcl	locus	127618299	127618809	.	+	.	ID=RLOC_00011002;geneIDs=comp140098_c0_seq1.path1;transcripts=comp140098_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127618299	127618809	.	+	.	ID=comp140098_c0_seq1.mrna1;geneID=comp140098_c0_seq1.path1;Name=comp140098_c0_seq1;Dir=indeterminatecoverage=83.8;identity=99.6;matches=509;mismatches=2;indels=0;unknowns=0;Target=comp140098_c0_seq1 511 1 .;CDS_Target=comp140098_c0_seq1 80 3 .;locus=RLOC_00011002
Chr1	stalkie_big_nohaplotig	exon	127618299	127618809	99	+	.	Parent=comp140098_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	127618301	127618378	.	+	0	Parent=comp140098_c0_seq1.mrna1
Chr1	gffcl	locus	127712014	127713248	.	+	.	ID=RLOC_00011004;geneIDs=comp142361_c0_seq1.path1;transcripts=comp142361_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127712014	127713248	.	+	.	ID=comp142361_c0_seq1.mrna1;geneID=comp142361_c0_seq1.path1;Name=comp142361_c0_seq1;Dir=sensecoverage=100.0;identity=88.6;matches=356;mismatches=12;indels=34;unknowns=0;Target=comp142361_c0_seq1 95 211 +;locus=RLOC_00011004
Chr1	stalkie_big_nohaplotig	exon	127712014	127712053	87	+	.	Parent=comp142361_c0_seq1.mrna1;Target=comp142361_c0_seq1 1 40 +
Chr1	stalkie_big_nohaplotig	exon	127712887	127713248	88	+	.	Parent=comp142361_c0_seq1.mrna1;Target=comp142361_c0_seq1 41 368 +
Chr1	stalkie_big_nohaplotig	CDS	127712941	127713057	.	+	0	Parent=comp142361_c0_seq1.mrna1
Chr1	gffcl	locus	127735626	127744011	.	+	.	ID=RLOC_00011005;geneIDs=ORF12.path1;transcripts=ORF12.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127735626	127744011	.	+	.	ID=ORF12.mrna1;geneID=ORF12.path1;Name=ORF12;Dir=sensecoverage=100.0;identity=99.2;matches=4578;mismatches=33;indels=3;unknowns=0;locus=RLOC_00011005
Chr1	stalkie_big_nohaplotig	exon	127735626	127735779	99	+	.	Parent=ORF12.mrna1;Target=ORF12 1 154 +
Chr1	stalkie_big_nohaplotig	exon	127736969	127739263	99	+	.	Parent=ORF12.mrna1;Target=ORF12 155 2452 +
Chr1	stalkie_big_nohaplotig	exon	127739320	127739964	99	+	.	Parent=ORF12.mrna1;Target=ORF12 2453 3097 +
Chr1	stalkie_big_nohaplotig	exon	127740026	127740295	97	+	.	Parent=ORF12.mrna1;Target=ORF12 3098 3367 +
Chr1	stalkie_big_nohaplotig	exon	127741607	127741831	100	+	.	Parent=ORF12.mrna1;Target=ORF12 3368 3592 +
Chr1	stalkie_big_nohaplotig	exon	127741899	127742306	99	+	.	Parent=ORF12.mrna1;Target=ORF12 3593 4000 +
Chr1	stalkie_big_nohaplotig	exon	127742910	127743137	99	+	.	Parent=ORF12.mrna1;Target=ORF12 4001 4228 +
Chr1	stalkie_big_nohaplotig	exon	127743498	127743590	96	+	.	Parent=ORF12.mrna1;Target=ORF12 4229 4321 +
Chr1	stalkie_big_nohaplotig	exon	127743658	127743884	100	+	.	Parent=ORF12.mrna1;Target=ORF12 4322 4548 +
Chr1	stalkie_big_nohaplotig	exon	127743946	127744011	100	+	.	Parent=ORF12.mrna1;Target=ORF12 4549 4614 +
Chr1	stalkie_big_nohaplotig	CDS	127735626	127735779	.	+	0	Parent=ORF12.mrna1;Target=ORF12 1 154 +
Chr1	stalkie_big_nohaplotig	CDS	127736969	127739263	.	+	2	Parent=ORF12.mrna1;Target=ORF12 155 2452 +
Chr1	stalkie_big_nohaplotig	CDS	127739320	127739964	.	+	2	Parent=ORF12.mrna1;Target=ORF12 2453 3097 +
Chr1	stalkie_big_nohaplotig	CDS	127740026	127740295	.	+	2	Parent=ORF12.mrna1;Target=ORF12 3098 3367 +
Chr1	stalkie_big_nohaplotig	CDS	127741607	127741831	.	+	2	Parent=ORF12.mrna1;Target=ORF12 3368 3592 +
Chr1	stalkie_big_nohaplotig	CDS	127741899	127742306	.	+	2	Parent=ORF12.mrna1;Target=ORF12 3593 4000 +
Chr1	stalkie_big_nohaplotig	CDS	127742910	127743137	.	+	2	Parent=ORF12.mrna1;Target=ORF12 4001 4228 +
Chr1	stalkie_big_nohaplotig	CDS	127743498	127743590	.	+	2	Parent=ORF12.mrna1;Target=ORF12 4229 4321 +
Chr1	stalkie_big_nohaplotig	CDS	127743658	127743884	.	+	2	Parent=ORF12.mrna1;Target=ORF12 4322 4548 +
Chr1	stalkie_big_nohaplotig	CDS	127743946	127744011	.	+	0	Parent=ORF12.mrna1;Target=ORF12 4549 4614 +
Chr1	gffcl	locus	127777988	127787348	.	+	.	ID=RLOC_00011006;geneIDs=FBgn0030018.1.path1;transcripts=FBgn0030018.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127777988	127787348	.	+	.	ID=FBgn0030018.1.mrna1;geneID=FBgn0030018.1.path1;Name=FBgn0030018.1;Dir=sensecoverage=100.0;identity=99.9;matches=3614;mismatches=3;indels=1;unknowns=0;locus=RLOC_00011006
Chr1	stalkie_big_nohaplotig	exon	127777988	127778398	100	+	.	Parent=FBgn0030018.1.mrna1;Target=FBgn0030018.1 1 411 +
Chr1	stalkie_big_nohaplotig	exon	127778982	127779474	99	+	.	Parent=FBgn0030018.1.mrna1;Target=FBgn0030018.1 412 904 +
Chr1	stalkie_big_nohaplotig	exon	127781415	127781577	100	+	.	Parent=FBgn0030018.1.mrna1;Target=FBgn0030018.1 905 1067 +
Chr1	stalkie_big_nohaplotig	exon	127781646	127781812	100	+	.	Parent=FBgn0030018.1.mrna1;Target=FBgn0030018.1 1068 1234 +
Chr1	stalkie_big_nohaplotig	exon	127781887	127782062	99	+	.	Parent=FBgn0030018.1.mrna1;Target=FBgn0030018.1 1235 1410 +
Chr1	stalkie_big_nohaplotig	exon	127782465	127782485	100	+	.	Parent=FBgn0030018.1.mrna1;Target=FBgn0030018.1 1411 1431 +
Chr1	stalkie_big_nohaplotig	exon	127784104	127784286	100	+	.	Parent=FBgn0030018.1.mrna1;Target=FBgn0030018.1 1432 1614 +
Chr1	stalkie_big_nohaplotig	exon	127784365	127784506	100	+	.	Parent=FBgn0030018.1.mrna1;Target=FBgn0030018.1 1615 1756 +
Chr1	stalkie_big_nohaplotig	exon	127785488	127787348	99	+	.	Parent=FBgn0030018.1.mrna1;Target=FBgn0030018.1 1757 3618 +
Chr1	stalkie_big_nohaplotig	CDS	127777988	127778398	.	+	0	Parent=FBgn0030018.1.mrna1;Target=FBgn0030018.1 1 411 +
Chr1	stalkie_big_nohaplotig	CDS	127778982	127779474	.	+	0	Parent=FBgn0030018.1.mrna1;Target=FBgn0030018.1 412 904 +
Chr1	stalkie_big_nohaplotig	CDS	127781415	127781577	.	+	2	Parent=FBgn0030018.1.mrna1;Target=FBgn0030018.1 905 1067 +
Chr1	stalkie_big_nohaplotig	CDS	127781646	127781812	.	+	1	Parent=FBgn0030018.1.mrna1;Target=FBgn0030018.1 1068 1234 +
Chr1	stalkie_big_nohaplotig	CDS	127781887	127782062	.	+	2	Parent=FBgn0030018.1.mrna1;Target=FBgn0030018.1 1235 1410 +
Chr1	stalkie_big_nohaplotig	CDS	127782465	127782485	.	+	0	Parent=FBgn0030018.1.mrna1;Target=FBgn0030018.1 1411 1431 +
Chr1	stalkie_big_nohaplotig	CDS	127784104	127784286	.	+	0	Parent=FBgn0030018.1.mrna1;Target=FBgn0030018.1 1432 1614 +
Chr1	stalkie_big_nohaplotig	CDS	127784365	127784506	.	+	0	Parent=FBgn0030018.1.mrna1;Target=FBgn0030018.1 1615 1756 +
Chr1	stalkie_big_nohaplotig	CDS	127785488	127787348	.	+	2	Parent=FBgn0030018.1.mrna1;Target=FBgn0030018.1 1757 3618 +
Chr1	gffcl	locus	127789126	127790031	.	+	.	ID=RLOC_00011007;geneIDs=comp149026_c0_seq1.path1;transcripts=comp149026_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127789126	127790031	.	+	.	ID=comp149026_c0_seq1.mrna1;geneID=comp149026_c0_seq1.path1;Name=comp149026_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=906;mismatches=0;indels=0;unknowns=0;Target=comp149026_c0_seq1 906 1 .;CDS_Target=comp149026_c0_seq1 75 1 .;locus=RLOC_00011007
Chr1	stalkie_big_nohaplotig	exon	127789126	127790031	100	+	.	Parent=comp149026_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	127789126	127789200	.	+	0	Parent=comp149026_c0_seq1.mrna1
Chr1	gffcl	locus	127790333	127792910	.	+	.	ID=RLOC_00011008;geneIDs=FBgn0030017.1.path1,comp158091_c0_seq1.path1;transcripts=comp158091_c0_seq1.mrna1,FBgn0030017.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127790333	127792910	.	+	.	ID=comp158091_c0_seq1.mrna1;geneID=comp158091_c0_seq1.path1;Name=comp158091_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=1583;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011008
Chr1	stalkie_big_nohaplotig	exon	127790333	127791351	99	+	.	Parent=comp158091_c0_seq1.mrna1;Target=comp158091_c0_seq1 1 1019 +
Chr1	stalkie_big_nohaplotig	exon	127792342	127792910	99	+	.	Parent=comp158091_c0_seq1.mrna1;Target=comp158091_c0_seq1 1020 1588 +
Chr1	stalkie_big_nohaplotig	CDS	127790826	127791351	.	+	0	Parent=comp158091_c0_seq1.mrna1;Target=comp158091_c0_seq1 494 1019 +
Chr1	stalkie_big_nohaplotig	CDS	127792342	127792910	.	+	2	Parent=comp158091_c0_seq1.mrna1;Target=comp158091_c0_seq1 1020 1588 +
Chr1	stalkie_big_nohaplotig	mRNA	127790356	127792910	.	+	.	ID=FBgn0030017.1.mrna1;geneID=FBgn0030017.1.path1;Name=FBgn0030017.1;Dir=sensecoverage=100.0;identity=99.7;matches=1486;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011008
Chr1	stalkie_big_nohaplotig	exon	127790356	127790780	99	+	.	Parent=FBgn0030017.1.mrna1;Target=FBgn0030017.1 1 425 +
Chr1	stalkie_big_nohaplotig	exon	127790855	127791351	99	+	.	Parent=FBgn0030017.1.mrna1;Target=FBgn0030017.1 426 922 +
Chr1	stalkie_big_nohaplotig	exon	127792342	127792910	99	+	.	Parent=FBgn0030017.1.mrna1;Target=FBgn0030017.1 923 1491 +
Chr1	stalkie_big_nohaplotig	CDS	127790356	127790780	.	+	0	Parent=FBgn0030017.1.mrna1;Target=FBgn0030017.1 1 425 +
Chr1	stalkie_big_nohaplotig	CDS	127790855	127791351	.	+	1	Parent=FBgn0030017.1.mrna1;Target=FBgn0030017.1 426 922 +
Chr1	stalkie_big_nohaplotig	CDS	127792342	127792910	.	+	2	Parent=FBgn0030017.1.mrna1;Target=FBgn0030017.1 923 1491 +
Chr1	gffcl	locus	127797183	127799097	.	-	.	ID=RLOC_00011009;geneIDs=comp160329_c0_seq1.path1;transcripts=comp160329_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127797183	127799097	.	-	.	ID=comp160329_c0_seq1.mrna1;geneID=comp160329_c0_seq1.path1;Name=comp160329_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.8;matches=1811;mismatches=72;indels=89;unknowns=0;Target=comp160329_c0_seq1 1940 1 .;CDS_Target=comp160329_c0_seq1 562 401 .;locus=RLOC_00011009
Chr1	stalkie_big_nohaplotig	exon	127797183	127799097	91	-	.	Parent=comp160329_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	127798527	127798688	.	-	0	Parent=comp160329_c0_seq1.mrna1
Chr1	gffcl	locus	127800606	127802795	.	-	.	ID=RLOC_00011010;geneIDs=comp161283_c0_seq1.path1;transcripts=comp161283_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127800606	127802795	.	-	.	ID=comp161283_c0_seq1.mrna1;geneID=comp161283_c0_seq1.path1;Name=comp161283_c0_seq1;Dir=antisensecoverage=99.8;identity=95.7;matches=1849;mismatches=38;indels=45;unknowns=0;locus=RLOC_00011010
Chr1	stalkie_big_nohaplotig	exon	127800606	127801217	99	-	.	Parent=comp161283_c0_seq1.mrna1;Target=comp161283_c0_seq1 4 615 -
Chr1	stalkie_big_nohaplotig	exon	127801288	127801364	100	-	.	Parent=comp161283_c0_seq1.mrna1;Target=comp161283_c0_seq1 616 692 -
Chr1	stalkie_big_nohaplotig	exon	127801435	127802293	91	-	.	Parent=comp161283_c0_seq1.mrna1;Target=comp161283_c0_seq1 693 1574 -
Chr1	stalkie_big_nohaplotig	exon	127802374	127802538	96	-	.	Parent=comp161283_c0_seq1.mrna1;Target=comp161283_c0_seq1 1575 1739 -
Chr1	stalkie_big_nohaplotig	exon	127802611	127802795	100	-	.	Parent=comp161283_c0_seq1.mrna1;Target=comp161283_c0_seq1 1740 1924 -
Chr1	stalkie_big_nohaplotig	CDS	127801874	127802293	.	-	0	Parent=comp161283_c0_seq1.mrna1;Target=comp161283_c0_seq1 1143 1574 .
Chr1	stalkie_big_nohaplotig	CDS	127802374	127802538	.	-	0	Parent=comp161283_c0_seq1.mrna1;Target=comp161283_c0_seq1 1575 1739 .
Chr1	stalkie_big_nohaplotig	CDS	127802611	127802718	.	-	0	Parent=comp161283_c0_seq1.mrna1;Target=comp161283_c0_seq1 1740 1847 .
Chr1	gffcl	locus	127863914	127872920	.	-	.	ID=RLOC_00011011;geneIDs=comp151101_c1_seq1.path1;transcripts=comp151101_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127863914	127872920	.	-	.	ID=comp151101_c1_seq1.mrna1;geneID=comp151101_c1_seq1.path1;Name=comp151101_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=455;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011011
Chr1	stalkie_big_nohaplotig	exon	127863914	127864159	99	-	.	Parent=comp151101_c1_seq1.mrna1;Target=comp151101_c1_seq1 458 213 .
Chr1	stalkie_big_nohaplotig	exon	127864247	127864279	100	-	.	Parent=comp151101_c1_seq1.mrna1;Target=comp151101_c1_seq1 212 180 .
Chr1	stalkie_big_nohaplotig	exon	127872686	127872806	99	-	.	Parent=comp151101_c1_seq1.mrna1;Target=comp151101_c1_seq1 179 59 .
Chr1	stalkie_big_nohaplotig	exon	127872863	127872920	100	-	.	Parent=comp151101_c1_seq1.mrna1;Target=comp151101_c1_seq1 58 1 .
Chr1	stalkie_big_nohaplotig	CDS	127863916	127864159	.	-	1	Parent=comp151101_c1_seq1.mrna1;Target=comp151101_c1_seq1 456 213 .
Chr1	stalkie_big_nohaplotig	CDS	127864247	127864279	.	-	1	Parent=comp151101_c1_seq1.mrna1;Target=comp151101_c1_seq1 212 180 .
Chr1	stalkie_big_nohaplotig	CDS	127872686	127872806	.	-	2	Parent=comp151101_c1_seq1.mrna1;Target=comp151101_c1_seq1 179 59 .
Chr1	stalkie_big_nohaplotig	CDS	127872863	127872905	.	-	0	Parent=comp151101_c1_seq1.mrna1;Target=comp151101_c1_seq1 58 16 .
Chr1	stalkie_big_nohaplotig	mRNA	127875568	127882026	.	-	.	ID=FBgn0039471.5.mrna1;geneID=FBgn0039471.5.path1;Name=FBgn0039471.5;Dir=sensecoverage=100.0;identity=99.3;matches=846;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011012
Chr1	stalkie_big_nohaplotig	exon	127875568	127875796	98	-	.	Parent=FBgn0039471.5.mrna1;Target=FBgn0039471.5 624 852 +
Chr1	stalkie_big_nohaplotig	exon	127881241	127881624	99	-	.	Parent=FBgn0039471.5.mrna1;Target=FBgn0039471.5 240 623 +
Chr1	stalkie_big_nohaplotig	exon	127881723	127881882	99	-	.	Parent=FBgn0039471.5.mrna1;Target=FBgn0039471.5 80 239 +
Chr1	stalkie_big_nohaplotig	exon	127881948	127882026	98	-	.	Parent=FBgn0039471.5.mrna1;Target=FBgn0039471.5 1 79 +
Chr1	stalkie_big_nohaplotig	CDS	127875568	127875796	.	-	1	Parent=FBgn0039471.5.mrna1;Target=FBgn0039471.5 624 852 +
Chr1	stalkie_big_nohaplotig	CDS	127881241	127881624	.	-	1	Parent=FBgn0039471.5.mrna1;Target=FBgn0039471.5 240 623 +
Chr1	stalkie_big_nohaplotig	CDS	127881723	127881882	.	-	2	Parent=FBgn0039471.5.mrna1;Target=FBgn0039471.5 80 239 +
Chr1	stalkie_big_nohaplotig	CDS	127881948	127882026	.	-	0	Parent=FBgn0039471.5.mrna1;Target=FBgn0039471.5 1 79 +
Chr1	gffcl	locus	127880297	127880480	.	-	.	ID=RLOC_00011013;geneIDs=comp145457_c0_seq1.path1;transcripts=comp145457_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127880297	127880480	.	-	.	ID=comp145457_c0_seq1.mrna1;geneID=comp145457_c0_seq1.path1;Name=comp145457_c0_seq1;Dir=indeterminatecoverage=89.3;identity=95.7;matches=176;mismatches=8;indels=0;unknowns=0;Target=comp145457_c0_seq1 206 23 .;CDS_Target=comp145457_c0_seq1 96 25 .;locus=RLOC_00011013
Chr1	stalkie_big_nohaplotig	exon	127880297	127880480	95	-	.	Parent=comp145457_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	127880407	127880478	.	-	0	Parent=comp145457_c0_seq1.mrna1
Chr1	gffcl	locus	127886332	127887347	.	-	.	ID=RLOC_00011014;geneIDs=FBgn0039471.6.path1;transcripts=FBgn0039471.6.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127886332	127887347	.	-	.	ID=FBgn0039471.6.mrna1;geneID=FBgn0039471.6.path1;Name=FBgn0039471.6;Dir=sensecoverage=100.0;identity=91.2;matches=750;mismatches=69;indels=3;unknowns=0;locus=RLOC_00011014
Chr1	stalkie_big_nohaplotig	exon	127886332	127886905	87	-	.	Parent=FBgn0039471.6.mrna1;Target=FBgn0039471.6 249 819 +
Chr1	stalkie_big_nohaplotig	exon	127887025	127887184	100	-	.	Parent=FBgn0039471.6.mrna1;Target=FBgn0039471.6 89 248 +
Chr1	stalkie_big_nohaplotig	exon	127887260	127887347	100	-	.	Parent=FBgn0039471.6.mrna1;Target=FBgn0039471.6 1 88 +
Chr1	stalkie_big_nohaplotig	CDS	127886332	127886905	.	-	1	Parent=FBgn0039471.6.mrna1;Target=FBgn0039471.6 249 819 +
Chr1	stalkie_big_nohaplotig	CDS	127887025	127887184	.	-	2	Parent=FBgn0039471.6.mrna1;Target=FBgn0039471.6 89 248 +
Chr1	stalkie_big_nohaplotig	CDS	127887260	127887347	.	-	0	Parent=FBgn0039471.6.mrna1;Target=FBgn0039471.6 1 88 +
Chr1	gffcl	locus	127909004	127910275	.	+	.	ID=RLOC_00011015;geneIDs=FBgn0026318.1.path1;transcripts=FBgn0026318.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127909004	127910275	.	+	.	ID=FBgn0026318.1.mrna1;geneID=FBgn0026318.1.path1;Name=FBgn0026318.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1265;mismatches=7;indels=0;unknowns=0;Target=FBgn0026318.1 1272 1 .;locus=RLOC_00011015
Chr1	stalkie_big_nohaplotig	exon	127909004	127910275	99	+	.	Parent=FBgn0026318.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	127909004	127910275	.	+	0	Parent=FBgn0026318.1.mrna1
Chr1	gffcl	locus	127931109	127932207	.	-	.	ID=RLOC_00011016;geneIDs=FBgn0039473.path1;transcripts=FBgn0039473.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127931109	127932207	.	-	.	ID=FBgn0039473.mrna1;geneID=FBgn0039473.path1;Name=FBgn0039473;Dir=sensecoverage=99.5;identity=99.6;matches=541;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011016
Chr1	stalkie_big_nohaplotig	exon	127931109	127931388	100	-	.	Parent=FBgn0039473.mrna1;Target=FBgn0039473 264 543 +
Chr1	stalkie_big_nohaplotig	exon	127931455	127931632	99	-	.	Parent=FBgn0039473.mrna1;Target=FBgn0039473 86 263 +
Chr1	stalkie_big_nohaplotig	exon	127932123	127932207	98	-	.	Parent=FBgn0039473.mrna1;Target=FBgn0039473 1 85 +
Chr1	stalkie_big_nohaplotig	CDS	127931109	127931388	.	-	1	Parent=FBgn0039473.mrna1;Target=FBgn0039473 264 543 +
Chr1	stalkie_big_nohaplotig	CDS	127931455	127931632	.	-	2	Parent=FBgn0039473.mrna1;Target=FBgn0039473 86 263 +
Chr1	stalkie_big_nohaplotig	CDS	127932123	127932207	.	-	0	Parent=FBgn0039473.mrna1;Target=FBgn0039473 1 85 +
Chr1	gffcl	locus	127935207	127936591	.	-	.	ID=RLOC_00011017;geneIDs=FBgn0030012.2.path1;transcripts=FBgn0030012.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127935207	127936591	.	-	.	ID=FBgn0030012.2.mrna1;geneID=FBgn0030012.2.path1;Name=FBgn0030012.2;Dir=sensecoverage=100.0;identity=99.8;matches=1320;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011017
Chr1	stalkie_big_nohaplotig	exon	127935207	127935995	100	-	.	Parent=FBgn0030012.2.mrna1;Target=FBgn0030012.2 535 1323 +
Chr1	stalkie_big_nohaplotig	exon	127936058	127936591	99	-	.	Parent=FBgn0030012.2.mrna1;Target=FBgn0030012.2 1 534 +
Chr1	stalkie_big_nohaplotig	CDS	127935207	127935995	.	-	0	Parent=FBgn0030012.2.mrna1;Target=FBgn0030012.2 535 1323 +
Chr1	stalkie_big_nohaplotig	CDS	127936058	127936591	.	-	0	Parent=FBgn0030012.2.mrna1;Target=FBgn0030012.2 1 534 +
Chr1	gffcl	locus	127938787	127940965	.	-	.	ID=RLOC_00011018;geneIDs=FBgn0030012.1.path1;transcripts=FBgn0030012.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127938787	127940965	.	-	.	ID=FBgn0030012.1.mrna1;geneID=FBgn0030012.1.path1;Name=FBgn0030012.1;Dir=sensecoverage=100.0;identity=99.7;matches=1920;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011018
Chr1	stalkie_big_nohaplotig	exon	127938787	127939536	99	-	.	Parent=FBgn0030012.1.mrna1;Target=FBgn0030012.1 1177 1926 +
Chr1	stalkie_big_nohaplotig	exon	127939609	127939743	99	-	.	Parent=FBgn0030012.1.mrna1;Target=FBgn0030012.1 1042 1176 +
Chr1	stalkie_big_nohaplotig	exon	127939801	127940328	99	-	.	Parent=FBgn0030012.1.mrna1;Target=FBgn0030012.1 514 1041 +
Chr1	stalkie_big_nohaplotig	exon	127940388	127940522	99	-	.	Parent=FBgn0030012.1.mrna1;Target=FBgn0030012.1 379 513 +
Chr1	stalkie_big_nohaplotig	exon	127940588	127940965	100	-	.	Parent=FBgn0030012.1.mrna1;Target=FBgn0030012.1 1 378 +
Chr1	stalkie_big_nohaplotig	CDS	127938787	127939536	.	-	0	Parent=FBgn0030012.1.mrna1;Target=FBgn0030012.1 1177 1926 +
Chr1	stalkie_big_nohaplotig	CDS	127939609	127939743	.	-	0	Parent=FBgn0030012.1.mrna1;Target=FBgn0030012.1 1042 1176 +
Chr1	stalkie_big_nohaplotig	CDS	127939801	127940328	.	-	0	Parent=FBgn0030012.1.mrna1;Target=FBgn0030012.1 514 1041 +
Chr1	stalkie_big_nohaplotig	CDS	127940388	127940522	.	-	0	Parent=FBgn0030012.1.mrna1;Target=FBgn0030012.1 379 513 +
Chr1	stalkie_big_nohaplotig	CDS	127940588	127940965	.	-	0	Parent=FBgn0030012.1.mrna1;Target=FBgn0030012.1 1 378 +
Chr1	gffcl	locus	127945373	127946766	.	-	.	ID=RLOC_00011019;geneIDs=FBgn0030010.1.path1;transcripts=FBgn0030010.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127945373	127946766	.	-	.	ID=FBgn0030010.1.mrna1;geneID=FBgn0030010.1.path1;Name=FBgn0030010.1;Dir=sensecoverage=100.0;identity=99.9;matches=1333;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011019
Chr1	stalkie_big_nohaplotig	exon	127945373	127946173	100	-	.	Parent=FBgn0030010.1.mrna1;Target=FBgn0030010.1 535 1335 +
Chr1	stalkie_big_nohaplotig	exon	127946233	127946766	99	-	.	Parent=FBgn0030010.1.mrna1;Target=FBgn0030010.1 1 534 +
Chr1	stalkie_big_nohaplotig	CDS	127945373	127946173	.	-	0	Parent=FBgn0030010.1.mrna1;Target=FBgn0030010.1 535 1335 +
Chr1	stalkie_big_nohaplotig	CDS	127946233	127946766	.	-	0	Parent=FBgn0030010.1.mrna1;Target=FBgn0030010.1 1 534 +
Chr1	gffcl	locus	127948729	127949653	.	-	.	ID=RLOC_00011020;geneIDs=ORF2396.path1;transcripts=ORF2396.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127948729	127949653	.	-	.	ID=ORF2396.mrna1;geneID=ORF2396.path1;Name=ORF2396;Dir=sensecoverage=100.0;identity=99.4;matches=862;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011020
Chr1	stalkie_big_nohaplotig	exon	127948729	127949082	99	-	.	Parent=ORF2396.mrna1;Target=ORF2396 514 867 +
Chr1	stalkie_big_nohaplotig	exon	127949141	127949653	99	-	.	Parent=ORF2396.mrna1;Target=ORF2396 1 513 +
Chr1	stalkie_big_nohaplotig	CDS	127948729	127949082	.	-	0	Parent=ORF2396.mrna1;Target=ORF2396 514 867 +
Chr1	stalkie_big_nohaplotig	CDS	127949141	127949653	.	-	0	Parent=ORF2396.mrna1;Target=ORF2396 1 513 +
Chr1	gffcl	locus	127952948	127954036	.	+	.	ID=RLOC_00011021;geneIDs=FBgn0030011.1.path1;transcripts=FBgn0030011.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127952948	127954036	.	+	.	ID=FBgn0030011.1.mrna1;geneID=FBgn0030011.1.path1;Name=FBgn0030011.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1088;mismatches=1;indels=0;unknowns=0;Target=FBgn0030011.1 1089 1 .;locus=RLOC_00011021
Chr1	stalkie_big_nohaplotig	exon	127952948	127954036	99	+	.	Parent=FBgn0030011.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	127952948	127954036	.	+	0	Parent=FBgn0030011.1.mrna1
Chr1	gffcl	locus	127968221	127969427	.	-	.	ID=RLOC_00011022;geneIDs=FBgn0030010.2.path1;transcripts=FBgn0030010.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127968221	127969427	.	-	.	ID=FBgn0030010.2.mrna1;geneID=FBgn0030010.2.path1;Name=FBgn0030010.2;Dir=sensecoverage=100.0;identity=99.1;matches=1136;mismatches=10;indels=0;unknowns=0;locus=RLOC_00011022
Chr1	stalkie_big_nohaplotig	exon	127968221	127968940	98	-	.	Parent=FBgn0030010.2.mrna1;Target=FBgn0030010.2 427 1146 +
Chr1	stalkie_big_nohaplotig	exon	127969002	127969427	99	-	.	Parent=FBgn0030010.2.mrna1;Target=FBgn0030010.2 1 426 +
Chr1	stalkie_big_nohaplotig	CDS	127968221	127968940	.	-	0	Parent=FBgn0030010.2.mrna1;Target=FBgn0030010.2 427 1146 +
Chr1	stalkie_big_nohaplotig	CDS	127969002	127969427	.	-	0	Parent=FBgn0030010.2.mrna1;Target=FBgn0030010.2 1 426 +
Chr1	gffcl	locus	127973326	127974905	.	-	.	ID=RLOC_00011023;geneIDs=FBgn0053303.1.path1;transcripts=FBgn0053303.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127973326	127974905	.	-	.	ID=FBgn0053303.1.mrna1;geneID=FBgn0053303.1.path1;Name=FBgn0053303.1;Dir=sensecoverage=100.0;identity=99.6;matches=1482;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011023
Chr1	stalkie_big_nohaplotig	exon	127973326	127974113	99	-	.	Parent=FBgn0053303.1.mrna1;Target=FBgn0053303.1 701 1488 +
Chr1	stalkie_big_nohaplotig	exon	127974206	127974905	99	-	.	Parent=FBgn0053303.1.mrna1;Target=FBgn0053303.1 1 700 +
Chr1	stalkie_big_nohaplotig	CDS	127973326	127974113	.	-	2	Parent=FBgn0053303.1.mrna1;Target=FBgn0053303.1 701 1488 +
Chr1	stalkie_big_nohaplotig	CDS	127974206	127974773	.	-	0	Parent=FBgn0053303.1.mrna1;Target=FBgn0053303.1 133 700 +
Chr1	gffcl	locus	127976349	127977331	.	+	.	ID=RLOC_00011024;geneIDs=comp161513_c0_seq1.path1;transcripts=comp161513_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127976349	127977331	.	+	.	ID=comp161513_c0_seq1.mrna1;geneID=comp161513_c0_seq1.path1;Name=comp161513_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=759;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011024
Chr1	stalkie_big_nohaplotig	exon	127976349	127976617	100	+	.	Parent=comp161513_c0_seq1.mrna1;Target=comp161513_c0_seq1 1 269 +
Chr1	stalkie_big_nohaplotig	exon	127976784	127976865	100	+	.	Parent=comp161513_c0_seq1.mrna1;Target=comp161513_c0_seq1 270 351 +
Chr1	stalkie_big_nohaplotig	exon	127976920	127977331	99	+	.	Parent=comp161513_c0_seq1.mrna1;Target=comp161513_c0_seq1 352 763 +
Chr1	stalkie_big_nohaplotig	CDS	127976535	127976617	.	+	0	Parent=comp161513_c0_seq1.mrna1;Target=comp161513_c0_seq1 187 269 +
Chr1	stalkie_big_nohaplotig	CDS	127976784	127976865	.	+	1	Parent=comp161513_c0_seq1.mrna1;Target=comp161513_c0_seq1 270 351 +
Chr1	stalkie_big_nohaplotig	CDS	127976920	127977306	.	+	0	Parent=comp161513_c0_seq1.mrna1;Target=comp161513_c0_seq1 352 738 +
Chr1	gffcl	locus	127979379	127980288	.	+	.	ID=RLOC_00011025;geneIDs=comp153351_c1_seq1.path1;transcripts=comp153351_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127979379	127980288	.	+	.	ID=comp153351_c1_seq1.mrna1;geneID=comp153351_c1_seq1.path1;Name=comp153351_c1_seq1;Dir=sensecoverage=98.8;identity=100.0;matches=856;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011025
Chr1	stalkie_big_nohaplotig	exon	127979379	127979896	100	+	.	Parent=comp153351_c1_seq1.mrna1;Target=comp153351_c1_seq1 11 528 +
Chr1	stalkie_big_nohaplotig	exon	127979951	127980288	100	+	.	Parent=comp153351_c1_seq1.mrna1;Target=comp153351_c1_seq1 529 866 +
Chr1	stalkie_big_nohaplotig	CDS	127979546	127979896	.	+	0	Parent=comp153351_c1_seq1.mrna1;Target=comp153351_c1_seq1 178 528 +
Chr1	stalkie_big_nohaplotig	CDS	127979951	127980286	.	+	0	Parent=comp153351_c1_seq1.mrna1;Target=comp153351_c1_seq1 529 864 +
Chr1	gffcl	locus	127981598	127982125	.	-	.	ID=RLOC_00011026;geneIDs=FBgn0030008.path1;transcripts=FBgn0030008.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127981598	127982125	.	-	.	ID=FBgn0030008.mrna1;geneID=FBgn0030008.path1;Name=FBgn0030008;Dir=indeterminatecoverage=99.4;identity=100.0;matches=528;mismatches=0;indels=0;unknowns=0;Target=FBgn0030008 531 4 .;locus=RLOC_00011026
Chr1	stalkie_big_nohaplotig	exon	127981598	127982125	100	-	.	Parent=FBgn0030008.mrna1
Chr1	stalkie_big_nohaplotig	CDS	127981598	127982125	.	-	0	Parent=FBgn0030008.mrna1
Chr1	gffcl	locus	127988333	127990939	.	+	.	ID=RLOC_00011027;geneIDs=comp151812_c0_seq1.path1;transcripts=comp151812_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127988333	127990939	.	+	.	ID=comp151812_c0_seq1.mrna1;geneID=comp151812_c0_seq1.path1;Name=comp151812_c0_seq1;Dir=antisensecoverage=99.7;identity=99.4;matches=2534;mismatches=15;indels=0;unknowns=0;locus=RLOC_00011027
Chr1	stalkie_big_nohaplotig	exon	127988333	127989350	98	+	.	Parent=comp151812_c0_seq1.mrna1;Target=comp151812_c0_seq1 1532 2549 -
Chr1	stalkie_big_nohaplotig	exon	127989409	127990939	100	+	.	Parent=comp151812_c0_seq1.mrna1;Target=comp151812_c0_seq1 1 1531 -
Chr1	stalkie_big_nohaplotig	CDS	127988727	127989350	.	+	0	Parent=comp151812_c0_seq1.mrna1;Target=comp151812_c0_seq1 1532 2155 .
Chr1	stalkie_big_nohaplotig	CDS	127989409	127990653	.	+	0	Parent=comp151812_c0_seq1.mrna1;Target=comp151812_c0_seq1 287 1531 .
Chr1	gffcl	locus	127991439	127993989	.	+	.	ID=RLOC_00011028;geneIDs=FBgn0030007.1.path1;transcripts=FBgn0030007.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127991439	127993989	.	+	.	ID=FBgn0030007.1.mrna1;geneID=FBgn0030007.1.path1;Name=FBgn0030007.1;Dir=sensecoverage=100.0;identity=99.8;matches=1503;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011028
Chr1	stalkie_big_nohaplotig	exon	127991439	127992505	99	+	.	Parent=FBgn0030007.1.mrna1;Target=FBgn0030007.1 1 1067 +
Chr1	stalkie_big_nohaplotig	exon	127993551	127993989	100	+	.	Parent=FBgn0030007.1.mrna1;Target=FBgn0030007.1 1068 1506 +
Chr1	stalkie_big_nohaplotig	CDS	127991439	127992505	.	+	0	Parent=FBgn0030007.1.mrna1;Target=FBgn0030007.1 1 1067 +
Chr1	stalkie_big_nohaplotig	CDS	127993551	127993989	.	+	1	Parent=FBgn0030007.1.mrna1;Target=FBgn0030007.1 1068 1506 +
Chr1	gffcl	locus	127996820	128000748	.	+	.	ID=RLOC_00011029;geneIDs=FBgn0025874.1.path1;transcripts=FBgn0025874.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	127996820	128000748	.	+	.	ID=FBgn0025874.1.mrna1;geneID=FBgn0025874.1.path1;Name=FBgn0025874.1;Dir=sensecoverage=100.0;identity=100.0;matches=2240;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011029
Chr1	stalkie_big_nohaplotig	exon	127996820	127997503	99	+	.	Parent=FBgn0025874.1.mrna1;Target=FBgn0025874.1 1 684 +
Chr1	stalkie_big_nohaplotig	exon	127999192	128000748	100	+	.	Parent=FBgn0025874.1.mrna1;Target=FBgn0025874.1 685 2241 +
Chr1	stalkie_big_nohaplotig	CDS	127996820	127997503	.	+	0	Parent=FBgn0025874.1.mrna1;Target=FBgn0025874.1 1 684 +
Chr1	stalkie_big_nohaplotig	CDS	127999192	128000748	.	+	0	Parent=FBgn0025874.1.mrna1;Target=FBgn0025874.1 685 2241 +
Chr1	gffcl	locus	128003027	128003775	.	-	.	ID=RLOC_00011030;geneIDs=comp153763_c0_seq1.path1;transcripts=comp153763_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128003027	128003775	.	-	.	ID=comp153763_c0_seq1.mrna1;geneID=comp153763_c0_seq1.path1;Name=comp153763_c0_seq1;Dir=sensecoverage=100.0;identity=97.8;matches=677;mismatches=11;indels=4;unknowns=0;Target=comp153763_c0_seq1 413 532 +;locus=RLOC_00011030
Chr1	stalkie_big_nohaplotig	exon	128003027	128003451	97	-	.	Parent=comp153763_c0_seq1.mrna1;Target=comp153763_c0_seq1 266 691 +
Chr1	stalkie_big_nohaplotig	exon	128003512	128003775	98	-	.	Parent=comp153763_c0_seq1.mrna1;Target=comp153763_c0_seq1 1 265 +
Chr1	stalkie_big_nohaplotig	CDS	128003184	128003303	.	-	0	Parent=comp153763_c0_seq1.mrna1
Chr1	gffcl	locus	128011412	128011962	.	+	.	ID=RLOC_00011032;geneIDs=comp142658_c0_seq1.path1;transcripts=comp142658_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128011412	128011962	.	+	.	ID=comp142658_c0_seq1.mrna1;geneID=comp142658_c0_seq1.path1;Name=comp142658_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.0;matches=537;mismatches=14;indels=33;unknowns=0;Target=comp142658_c0_seq1 584 1 .;CDS_Target=comp142658_c0_seq1 470 387 .;locus=RLOC_00011032
Chr1	stalkie_big_nohaplotig	exon	128011412	128011962	91	+	.	Parent=comp142658_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	128011798	128011851	.	+	0	Parent=comp142658_c0_seq1.mrna1
Chr1	gffcl	locus	128012667	128016113	.	-	.	ID=RLOC_00011033;geneIDs=FBgn0030005.1.path1;transcripts=FBgn0030005.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128012667	128016113	.	-	.	ID=FBgn0030005.1.mrna1;geneID=FBgn0030005.1.path1;Name=FBgn0030005.1;Dir=sensecoverage=100.0;identity=99.4;matches=987;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011033
Chr1	stalkie_big_nohaplotig	exon	128012667	128013638	99	-	.	Parent=FBgn0030005.1.mrna1;Target=FBgn0030005.1 22 993 +
Chr1	stalkie_big_nohaplotig	exon	128016093	128016113	100	-	.	Parent=FBgn0030005.1.mrna1;Target=FBgn0030005.1 1 21 +
Chr1	stalkie_big_nohaplotig	CDS	128012667	128013638	.	-	0	Parent=FBgn0030005.1.mrna1;Target=FBgn0030005.1 22 993 +
Chr1	stalkie_big_nohaplotig	CDS	128016093	128016113	.	-	0	Parent=FBgn0030005.1.mrna1;Target=FBgn0030005.1 1 21 +
Chr1	gffcl	locus	128016167	128017642	.	-	.	ID=RLOC_00011034;geneIDs=FBgn0038301.5.path1;transcripts=FBgn0038301.5.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128016167	128017642	.	-	.	ID=FBgn0038301.5.mrna1;geneID=FBgn0038301.5.path1;Name=FBgn0038301.5;Dir=sensecoverage=100.0;identity=100.0;matches=1416;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011034
Chr1	stalkie_big_nohaplotig	exon	128016167	128016898	100	-	.	Parent=FBgn0038301.5.mrna1;Target=FBgn0038301.5 685 1416 +
Chr1	stalkie_big_nohaplotig	exon	128016959	128017642	100	-	.	Parent=FBgn0038301.5.mrna1;Target=FBgn0038301.5 1 684 +
Chr1	stalkie_big_nohaplotig	CDS	128016167	128016898	.	-	0	Parent=FBgn0038301.5.mrna1;Target=FBgn0038301.5 685 1416 +
Chr1	stalkie_big_nohaplotig	CDS	128016959	128017642	.	-	0	Parent=FBgn0038301.5.mrna1;Target=FBgn0038301.5 1 684 +
Chr1	gffcl	locus	128019094	128020233	.	-	.	ID=RLOC_00011035;geneIDs=FBgn0030003.1.path1;transcripts=FBgn0030003.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128019094	128020233	.	-	.	ID=FBgn0030003.1.mrna1;geneID=FBgn0030003.1.path1;Name=FBgn0030003.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1138;mismatches=2;indels=0;unknowns=0;Target=FBgn0030003.1 1140 1 .;locus=RLOC_00011035
Chr1	stalkie_big_nohaplotig	exon	128019094	128020233	99	-	.	Parent=FBgn0030003.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	128019094	128020233	.	-	0	Parent=FBgn0030003.1.mrna1
Chr1	gffcl	locus	128055653	128056680	.	+	.	ID=RLOC_00011037;geneIDs=comp84906_c0_seq1.path1;transcripts=comp84906_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128055653	128056680	.	+	.	ID=comp84906_c0_seq1.mrna1;geneID=comp84906_c0_seq1.path1;Name=comp84906_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.5;matches=967;mismatches=52;indels=38;unknowns=0;Target=comp84906_c0_seq1 1048 1 .;CDS_Target=comp84906_c0_seq1 992 849 .;locus=RLOC_00011037
Chr1	stalkie_big_nohaplotig	exon	128055653	128056680	91	+	.	Parent=comp84906_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	128056481	128056624	.	+	0	Parent=comp84906_c0_seq1.mrna1
Chr1	gffcl	locus	128069603	128071591	.	-	.	ID=RLOC_00011038;geneIDs=FBgn0022097.1.path1;transcripts=FBgn0022097.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128069603	128071591	.	-	.	ID=FBgn0022097.1.mrna1;geneID=FBgn0022097.1.path1;Name=FBgn0022097.1;Dir=sensecoverage=100.0;identity=99.6;matches=753;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011038
Chr1	stalkie_big_nohaplotig	exon	128069603	128069817	99	-	.	Parent=FBgn0022097.1.mrna1;Target=FBgn0022097.1 542 756 +
Chr1	stalkie_big_nohaplotig	exon	128069881	128070244	99	-	.	Parent=FBgn0022097.1.mrna1;Target=FBgn0022097.1 178 541 +
Chr1	stalkie_big_nohaplotig	exon	128071293	128071410	100	-	.	Parent=FBgn0022097.1.mrna1;Target=FBgn0022097.1 60 177 +
Chr1	stalkie_big_nohaplotig	exon	128071533	128071591	100	-	.	Parent=FBgn0022097.1.mrna1;Target=FBgn0022097.1 1 59 +
Chr1	stalkie_big_nohaplotig	CDS	128069603	128069817	.	-	2	Parent=FBgn0022097.1.mrna1;Target=FBgn0022097.1 542 756 +
Chr1	stalkie_big_nohaplotig	CDS	128069881	128070244	.	-	0	Parent=FBgn0022097.1.mrna1;Target=FBgn0022097.1 178 541 +
Chr1	stalkie_big_nohaplotig	CDS	128071293	128071410	.	-	1	Parent=FBgn0022097.1.mrna1;Target=FBgn0022097.1 60 177 +
Chr1	stalkie_big_nohaplotig	CDS	128071533	128071591	.	-	0	Parent=FBgn0022097.1.mrna1;Target=FBgn0022097.1 1 59 +
Chr1	gffcl	locus	128072317	128074157	.	+	.	ID=RLOC_00011039;geneIDs=comp143431_c0_seq1.path1;transcripts=comp143431_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128072317	128074157	.	+	.	ID=comp143431_c0_seq1.mrna1;geneID=comp143431_c0_seq1.path1;Name=comp143431_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=708;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011039
Chr1	stalkie_big_nohaplotig	exon	128072317	128072673	100	+	.	Parent=comp143431_c0_seq1.mrna1;Target=comp143431_c0_seq1 354 710 -
Chr1	stalkie_big_nohaplotig	exon	128072743	128072868	99	+	.	Parent=comp143431_c0_seq1.mrna1;Target=comp143431_c0_seq1 228 353 -
Chr1	stalkie_big_nohaplotig	exon	128073931	128074157	99	+	.	Parent=comp143431_c0_seq1.mrna1;Target=comp143431_c0_seq1 1 227 -
Chr1	stalkie_big_nohaplotig	CDS	128072611	128072673	.	+	0	Parent=comp143431_c0_seq1.mrna1;Target=comp143431_c0_seq1 354 416 .
Chr1	stalkie_big_nohaplotig	CDS	128072743	128072868	.	+	0	Parent=comp143431_c0_seq1.mrna1;Target=comp143431_c0_seq1 228 353 .
Chr1	stalkie_big_nohaplotig	CDS	128073931	128074125	.	+	0	Parent=comp143431_c0_seq1.mrna1;Target=comp143431_c0_seq1 33 227 .
Chr1	gffcl	locus	128094890	128095392	.	-	.	ID=RLOC_00011041;geneIDs=FBgn0040375.1.path1;transcripts=FBgn0040375.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128094890	128095392	.	-	.	ID=FBgn0040375.1.mrna1;geneID=FBgn0040375.1.path1;Name=FBgn0040375.1;Dir=indeterminatecoverage=96.9;identity=99.6;matches=488;mismatches=2;indels=0;unknowns=13;Target=FBgn0040375.1 503 1 .;CDS_Target=FBgn0040375.1 501 1 .;locus=RLOC_00011041
Chr1	stalkie_big_nohaplotig	exon	128094890	128095392	99	-	.	Parent=FBgn0040375.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	128094892	128095392	.	-	0	Parent=FBgn0040375.1.mrna1
Chr1	gffcl	locus	128096880	128099162	.	+	.	ID=RLOC_00011042;geneIDs=FBgn0037270.1.path1,comp168586_c0_seq1.path1;transcripts=comp168586_c0_seq1.mrna1,FBgn0037270.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128096880	128098114	.	+	.	ID=comp168586_c0_seq1.mrna1;geneID=comp168586_c0_seq1.path1;Name=comp168586_c0_seq1;Dir=antisensecoverage=96.4;identity=99.6;matches=692;mismatches=3;indels=0;unknowns=0;Target=comp168586_c0_seq1 372 584 .;locus=RLOC_00011042
Chr1	stalkie_big_nohaplotig	exon	128096880	128097550	99	+	.	Parent=comp168586_c0_seq1.mrna1;Target=comp168586_c0_seq1 25 695 -
Chr1	stalkie_big_nohaplotig	exon	128098091	128098114	100	+	.	Parent=comp168586_c0_seq1.mrna1;Target=comp168586_c0_seq1 1 24 -
Chr1	stalkie_big_nohaplotig	CDS	128096991	128097203	.	+	0	Parent=comp168586_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128097948	128099162	.	+	.	ID=FBgn0037270.1.mrna1;geneID=FBgn0037270.1.path1;Name=FBgn0037270.1;Dir=sensecoverage=99.8;identity=100.0;matches=1099;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011042
Chr1	stalkie_big_nohaplotig	exon	128097948	128098318	100	+	.	Parent=FBgn0037270.1.mrna1;Target=FBgn0037270.1 3 373 +
Chr1	stalkie_big_nohaplotig	exon	128098380	128098526	100	+	.	Parent=FBgn0037270.1.mrna1;Target=FBgn0037270.1 374 520 +
Chr1	stalkie_big_nohaplotig	exon	128098582	128099162	100	+	.	Parent=FBgn0037270.1.mrna1;Target=FBgn0037270.1 521 1101 +
Chr1	stalkie_big_nohaplotig	CDS	128097949	128098318	.	+	0	Parent=FBgn0037270.1.mrna1;Target=FBgn0037270.1 4 373 +
Chr1	stalkie_big_nohaplotig	CDS	128098380	128098526	.	+	2	Parent=FBgn0037270.1.mrna1;Target=FBgn0037270.1 374 520 +
Chr1	stalkie_big_nohaplotig	CDS	128098582	128099162	.	+	2	Parent=FBgn0037270.1.mrna1;Target=FBgn0037270.1 521 1101 +
Chr1	gffcl	locus	128104767	128105374	.	+	.	ID=RLOC_00011043;geneIDs=comp134950_c0_seq1.path1;transcripts=comp134950_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128104767	128105374	.	+	.	ID=comp134950_c0_seq1.mrna1;geneID=comp134950_c0_seq1.path1;Name=comp134950_c0_seq1;Dir=sensecoverage=98.9;identity=99.4;matches=542;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011043
Chr1	stalkie_big_nohaplotig	exon	128104767	128104858	96	+	.	Parent=comp134950_c0_seq1.mrna1;Target=comp134950_c0_seq1 1 92 +
Chr1	stalkie_big_nohaplotig	exon	128104922	128105374	100	+	.	Parent=comp134950_c0_seq1.mrna1;Target=comp134950_c0_seq1 93 545 +
Chr1	stalkie_big_nohaplotig	CDS	128104847	128104858	.	+	0	Parent=comp134950_c0_seq1.mrna1;Target=comp134950_c0_seq1 81 92 +
Chr1	stalkie_big_nohaplotig	CDS	128104922	128105212	.	+	0	Parent=comp134950_c0_seq1.mrna1;Target=comp134950_c0_seq1 93 383 +
Chr1	gffcl	locus	128105973	128108369	.	-	.	ID=RLOC_00011044;geneIDs=FBgn0028426.1.path1;transcripts=FBgn0028426.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128105973	128108369	.	-	.	ID=FBgn0028426.1.mrna1;geneID=FBgn0028426.1.path1;Name=FBgn0028426.1;Dir=sensecoverage=100.0;identity=99.6;matches=2254;mismatches=7;indels=1;unknowns=0;Target=FBgn0028426.1 3 83 +;locus=RLOC_00011044
Chr1	stalkie_big_nohaplotig	exon	128105973	128107078	99	-	.	Parent=FBgn0028426.1.mrna1;Target=FBgn0028426.1 1157 2262 +
Chr1	stalkie_big_nohaplotig	exon	128107148	128107913	99	-	.	Parent=FBgn0028426.1.mrna1;Target=FBgn0028426.1 391 1156 +
Chr1	stalkie_big_nohaplotig	exon	128107981	128108369	99	-	.	Parent=FBgn0028426.1.mrna1;Target=FBgn0028426.1 1 390 +
Chr1	stalkie_big_nohaplotig	CDS	128108288	128108367	.	-	0	Parent=FBgn0028426.1.mrna1
Chr1	gffcl	locus	128108942	128109496	.	+	.	ID=RLOC_00011045;geneIDs=comp133319_c0_seq1.path1;transcripts=comp133319_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128108942	128109496	.	+	.	ID=comp133319_c0_seq1.mrna1;geneID=comp133319_c0_seq1.path1;Name=comp133319_c0_seq1;Dir=indeterminatecoverage=93.1;identity=99.8;matches=554;mismatches=1;indels=0;unknowns=0;Target=comp133319_c0_seq1 596 42 .;CDS_Target=comp133319_c0_seq1 507 409 .;locus=RLOC_00011045
Chr1	stalkie_big_nohaplotig	exon	128108942	128109496	99	+	.	Parent=comp133319_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	128109309	128109407	.	+	0	Parent=comp133319_c0_seq1.mrna1
Chr1	gffcl	locus	128109987	128114952	.	-	.	ID=RLOC_00011046;geneIDs=ORF19.path1;transcripts=ORF19.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128109987	128114952	.	-	.	ID=ORF19.mrna1;geneID=ORF19.path1;Name=ORF19;Dir=sensecoverage=100.0;identity=100.0;matches=4434;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011046
Chr1	stalkie_big_nohaplotig	exon	128109987	128110082	100	-	.	Parent=ORF19.mrna1;Target=ORF19 4339 4434 +
Chr1	stalkie_big_nohaplotig	exon	128110149	128110621	100	-	.	Parent=ORF19.mrna1;Target=ORF19 3866 4338 +
Chr1	stalkie_big_nohaplotig	exon	128110704	128111264	100	-	.	Parent=ORF19.mrna1;Target=ORF19 3305 3865 +
Chr1	stalkie_big_nohaplotig	exon	128111322	128111503	100	-	.	Parent=ORF19.mrna1;Target=ORF19 3123 3304 +
Chr1	stalkie_big_nohaplotig	exon	128111556	128111634	100	-	.	Parent=ORF19.mrna1;Target=ORF19 3044 3122 +
Chr1	stalkie_big_nohaplotig	exon	128111698	128114367	100	-	.	Parent=ORF19.mrna1;Target=ORF19 374 3043 +
Chr1	stalkie_big_nohaplotig	exon	128114489	128114611	100	-	.	Parent=ORF19.mrna1;Target=ORF19 251 373 +
Chr1	stalkie_big_nohaplotig	exon	128114703	128114952	100	-	.	Parent=ORF19.mrna1;Target=ORF19 1 250 +
Chr1	stalkie_big_nohaplotig	CDS	128109987	128110082	.	-	0	Parent=ORF19.mrna1;Target=ORF19 4339 4434 +
Chr1	stalkie_big_nohaplotig	CDS	128110149	128110621	.	-	2	Parent=ORF19.mrna1;Target=ORF19 3866 4338 +
Chr1	stalkie_big_nohaplotig	CDS	128110704	128111264	.	-	2	Parent=ORF19.mrna1;Target=ORF19 3305 3865 +
Chr1	stalkie_big_nohaplotig	CDS	128111322	128111503	.	-	1	Parent=ORF19.mrna1;Target=ORF19 3123 3304 +
Chr1	stalkie_big_nohaplotig	CDS	128111556	128111634	.	-	2	Parent=ORF19.mrna1;Target=ORF19 3044 3122 +
Chr1	stalkie_big_nohaplotig	CDS	128111698	128114367	.	-	2	Parent=ORF19.mrna1;Target=ORF19 374 3043 +
Chr1	stalkie_big_nohaplotig	CDS	128114489	128114611	.	-	2	Parent=ORF19.mrna1;Target=ORF19 251 373 +
Chr1	stalkie_big_nohaplotig	CDS	128114703	128114952	.	-	0	Parent=ORF19.mrna1;Target=ORF19 1 250 +
Chr1	gffcl	locus	128153590	128160154	.	-	.	ID=RLOC_00011047;geneIDs=FBgn0031689.2.path1;transcripts=FBgn0031689.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128153590	128160154	.	-	.	ID=FBgn0031689.2.mrna1;geneID=FBgn0031689.2.path1;Name=FBgn0031689.2;Dir=sensecoverage=100.0;identity=99.5;matches=1546;mismatches=8;indels=0;unknowns=0;locus=RLOC_00011047
Chr1	stalkie_big_nohaplotig	exon	128153590	128153753	99	-	.	Parent=FBgn0031689.2.mrna1;Target=FBgn0031689.2 1391 1554 +
Chr1	stalkie_big_nohaplotig	exon	128153813	128154082	99	-	.	Parent=FBgn0031689.2.mrna1;Target=FBgn0031689.2 1121 1390 +
Chr1	stalkie_big_nohaplotig	exon	128154152	128154275	98	-	.	Parent=FBgn0031689.2.mrna1;Target=FBgn0031689.2 997 1120 +
Chr1	stalkie_big_nohaplotig	exon	128154333	128154743	99	-	.	Parent=FBgn0031689.2.mrna1;Target=FBgn0031689.2 586 996 +
Chr1	stalkie_big_nohaplotig	exon	128155804	128156016	99	-	.	Parent=FBgn0031689.2.mrna1;Target=FBgn0031689.2 373 585 +
Chr1	stalkie_big_nohaplotig	exon	128156068	128156206	99	-	.	Parent=FBgn0031689.2.mrna1;Target=FBgn0031689.2 234 372 +
Chr1	stalkie_big_nohaplotig	exon	128159922	128160154	100	-	.	Parent=FBgn0031689.2.mrna1;Target=FBgn0031689.2 1 233 +
Chr1	stalkie_big_nohaplotig	CDS	128153590	128153753	.	-	2	Parent=FBgn0031689.2.mrna1;Target=FBgn0031689.2 1391 1554 +
Chr1	stalkie_big_nohaplotig	CDS	128153813	128154082	.	-	2	Parent=FBgn0031689.2.mrna1;Target=FBgn0031689.2 1121 1390 +
Chr1	stalkie_big_nohaplotig	CDS	128154152	128154275	.	-	0	Parent=FBgn0031689.2.mrna1;Target=FBgn0031689.2 997 1120 +
Chr1	stalkie_big_nohaplotig	CDS	128154333	128154743	.	-	0	Parent=FBgn0031689.2.mrna1;Target=FBgn0031689.2 586 996 +
Chr1	stalkie_big_nohaplotig	CDS	128155804	128156016	.	-	0	Parent=FBgn0031689.2.mrna1;Target=FBgn0031689.2 373 585 +
Chr1	stalkie_big_nohaplotig	CDS	128156068	128156206	.	-	1	Parent=FBgn0031689.2.mrna1;Target=FBgn0031689.2 234 372 +
Chr1	stalkie_big_nohaplotig	CDS	128159922	128160154	.	-	0	Parent=FBgn0031689.2.mrna1;Target=FBgn0031689.2 1 233 +
Chr1	gffcl	locus	128173594	128173829	.	-	.	ID=RLOC_00011048;geneIDs=comp105666_c0_seq1.path1;transcripts=comp105666_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128173594	128173829	.	-	.	ID=comp105666_c0_seq1.mrna1;geneID=comp105666_c0_seq1.path1;Name=comp105666_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=231;mismatches=5;indels=0;unknowns=0;Target=comp105666_c0_seq1 236 1 .;CDS_Target=comp105666_c0_seq1 160 53 .;locus=RLOC_00011048
Chr1	stalkie_big_nohaplotig	exon	128173594	128173829	97	-	.	Parent=comp105666_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	128173670	128173777	.	-	0	Parent=comp105666_c0_seq1.mrna1
Chr1	gffcl	locus	128190522	128192702	.	+	.	ID=RLOC_00011049;geneIDs=FBgn0028940.1.path1;transcripts=FBgn0028940.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128190522	128192702	.	+	.	ID=FBgn0028940.1.mrna1;geneID=FBgn0028940.1.path1;Name=FBgn0028940.1;Dir=sensecoverage=100.0;identity=99.3;matches=1525;mismatches=11;indels=0;unknowns=0;locus=RLOC_00011049
Chr1	stalkie_big_nohaplotig	exon	128190522	128190733	100	+	.	Parent=FBgn0028940.1.mrna1;Target=FBgn0028940.1 1 212 +
Chr1	stalkie_big_nohaplotig	exon	128190799	128190937	98	+	.	Parent=FBgn0028940.1.mrna1;Target=FBgn0028940.1 213 351 +
Chr1	stalkie_big_nohaplotig	exon	128191040	128191147	100	+	.	Parent=FBgn0028940.1.mrna1;Target=FBgn0028940.1 352 459 +
Chr1	stalkie_big_nohaplotig	exon	128191337	128191441	100	+	.	Parent=FBgn0028940.1.mrna1;Target=FBgn0028940.1 460 564 +
Chr1	stalkie_big_nohaplotig	exon	128191510	128191923	99	+	.	Parent=FBgn0028940.1.mrna1;Target=FBgn0028940.1 565 978 +
Chr1	stalkie_big_nohaplotig	exon	128191995	128192118	99	+	.	Parent=FBgn0028940.1.mrna1;Target=FBgn0028940.1 979 1102 +
Chr1	stalkie_big_nohaplotig	exon	128192201	128192470	100	+	.	Parent=FBgn0028940.1.mrna1;Target=FBgn0028940.1 1103 1372 +
Chr1	stalkie_big_nohaplotig	exon	128192539	128192702	95	+	.	Parent=FBgn0028940.1.mrna1;Target=FBgn0028940.1 1373 1536 +
Chr1	stalkie_big_nohaplotig	CDS	128190522	128190733	.	+	0	Parent=FBgn0028940.1.mrna1;Target=FBgn0028940.1 1 212 +
Chr1	stalkie_big_nohaplotig	CDS	128190799	128190937	.	+	1	Parent=FBgn0028940.1.mrna1;Target=FBgn0028940.1 213 351 +
Chr1	stalkie_big_nohaplotig	CDS	128191040	128191147	.	+	0	Parent=FBgn0028940.1.mrna1;Target=FBgn0028940.1 352 459 +
Chr1	stalkie_big_nohaplotig	CDS	128191337	128191441	.	+	0	Parent=FBgn0028940.1.mrna1;Target=FBgn0028940.1 460 564 +
Chr1	stalkie_big_nohaplotig	CDS	128191510	128191923	.	+	0	Parent=FBgn0028940.1.mrna1;Target=FBgn0028940.1 565 978 +
Chr1	stalkie_big_nohaplotig	CDS	128191995	128192118	.	+	0	Parent=FBgn0028940.1.mrna1;Target=FBgn0028940.1 979 1102 +
Chr1	stalkie_big_nohaplotig	CDS	128192201	128192470	.	+	2	Parent=FBgn0028940.1.mrna1;Target=FBgn0028940.1 1103 1372 +
Chr1	stalkie_big_nohaplotig	CDS	128192539	128192702	.	+	2	Parent=FBgn0028940.1.mrna1;Target=FBgn0028940.1 1373 1536 +
Chr1	gffcl	locus	128200057	128200747	.	-	.	ID=RLOC_00011050;geneIDs=comp139156_c1_seq1.path1;transcripts=comp139156_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128200057	128200747	.	-	.	ID=comp139156_c1_seq1.mrna1;geneID=comp139156_c1_seq1.path1;Name=comp139156_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=689;mismatches=2;indels=0;unknowns=0;Target=comp139156_c1_seq1 691 1 .;CDS_Target=comp139156_c1_seq1 552 271 .;locus=RLOC_00011050
Chr1	stalkie_big_nohaplotig	exon	128200057	128200747	99	-	.	Parent=comp139156_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	128200196	128200477	.	-	0	Parent=comp139156_c1_seq1.mrna1
Chr1	gffcl	locus	128209009	128213077	.	-	.	ID=RLOC_00011051;geneIDs=FBgn0028342.1.path1;transcripts=FBgn0028342.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128209009	128213077	.	-	.	ID=FBgn0028342.1.mrna1;geneID=FBgn0028342.1.path1;Name=FBgn0028342.1;Dir=sensecoverage=99.8;identity=99.8;matches=478;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011051
Chr1	stalkie_big_nohaplotig	exon	128209009	128209068	100	-	.	Parent=FBgn0028342.1.mrna1;Target=FBgn0028342.1 421 480 +
Chr1	stalkie_big_nohaplotig	exon	128209133	128209344	100	-	.	Parent=FBgn0028342.1.mrna1;Target=FBgn0028342.1 209 420 +
Chr1	stalkie_big_nohaplotig	exon	128212871	128213077	99	-	.	Parent=FBgn0028342.1.mrna1;Target=FBgn0028342.1 2 208 +
Chr1	stalkie_big_nohaplotig	CDS	128209009	128209068	.	-	0	Parent=FBgn0028342.1.mrna1;Target=FBgn0028342.1 421 480 +
Chr1	stalkie_big_nohaplotig	CDS	128209133	128209344	.	-	2	Parent=FBgn0028342.1.mrna1;Target=FBgn0028342.1 209 420 +
Chr1	stalkie_big_nohaplotig	CDS	128212871	128213075	.	-	0	Parent=FBgn0028342.1.mrna1;Target=FBgn0028342.1 4 208 +
Chr1	gffcl	locus	128214157	128222492	.	+	.	ID=RLOC_00011052;geneIDs=FBgn0030274.1.path1,comp261923_c0_seq1.path1;transcripts=FBgn0030274.1.mrna1,comp261923_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128214157	128222492	.	+	.	ID=FBgn0030274.1.mrna1;geneID=FBgn0030274.1.path1;Name=FBgn0030274.1;Dir=sensecoverage=100.0;identity=100.0;matches=1845;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011052
Chr1	stalkie_big_nohaplotig	exon	128214157	128214282	100	+	.	Parent=FBgn0030274.1.mrna1;Target=FBgn0030274.1 1 126 +
Chr1	stalkie_big_nohaplotig	exon	128214424	128214459	100	+	.	Parent=FBgn0030274.1.mrna1;Target=FBgn0030274.1 127 162 +
Chr1	stalkie_big_nohaplotig	exon	128218784	128219968	100	+	.	Parent=FBgn0030274.1.mrna1;Target=FBgn0030274.1 163 1347 +
Chr1	stalkie_big_nohaplotig	exon	128220045	128220228	100	+	.	Parent=FBgn0030274.1.mrna1;Target=FBgn0030274.1 1348 1531 +
Chr1	stalkie_big_nohaplotig	exon	128222075	128222236	100	+	.	Parent=FBgn0030274.1.mrna1;Target=FBgn0030274.1 1532 1693 +
Chr1	stalkie_big_nohaplotig	exon	128222341	128222492	100	+	.	Parent=FBgn0030274.1.mrna1;Target=FBgn0030274.1 1694 1845 +
Chr1	stalkie_big_nohaplotig	CDS	128214157	128214282	.	+	0	Parent=FBgn0030274.1.mrna1;Target=FBgn0030274.1 1 126 +
Chr1	stalkie_big_nohaplotig	CDS	128214424	128214459	.	+	0	Parent=FBgn0030274.1.mrna1;Target=FBgn0030274.1 127 162 +
Chr1	stalkie_big_nohaplotig	CDS	128218784	128219968	.	+	0	Parent=FBgn0030274.1.mrna1;Target=FBgn0030274.1 163 1347 +
Chr1	stalkie_big_nohaplotig	CDS	128220045	128220228	.	+	0	Parent=FBgn0030274.1.mrna1;Target=FBgn0030274.1 1348 1531 +
Chr1	stalkie_big_nohaplotig	CDS	128222075	128222236	.	+	2	Parent=FBgn0030274.1.mrna1;Target=FBgn0030274.1 1532 1693 +
Chr1	stalkie_big_nohaplotig	CDS	128222341	128222492	.	+	2	Parent=FBgn0030274.1.mrna1;Target=FBgn0030274.1 1694 1845 +
Chr1	stalkie_big_nohaplotig	mRNA	128217230	128218807	.	+	.	ID=comp261923_c0_seq1.mrna1;geneID=comp261923_c0_seq1.path1;Name=comp261923_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=225;mismatches=0;indels=0;unknowns=0;Target=comp261923_c0_seq1 106 225 .;locus=RLOC_00011052
Chr1	stalkie_big_nohaplotig	exon	128217230	128217430	100	+	.	Parent=comp261923_c0_seq1.mrna1;Target=comp261923_c0_seq1 25 225 -
Chr1	stalkie_big_nohaplotig	exon	128218784	128218807	100	+	.	Parent=comp261923_c0_seq1.mrna1;Target=comp261923_c0_seq1 1 24 -
Chr1	stalkie_big_nohaplotig	CDS	128217230	128217349	.	+	0	Parent=comp261923_c0_seq1.mrna1
Chr1	gffcl	locus	128222996	128226805	.	-	.	ID=RLOC_00011053;geneIDs=FBgn0261277.1.path1;transcripts=FBgn0261277.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128222996	128226805	.	-	.	ID=FBgn0261277.1.mrna1;geneID=FBgn0261277.1.path1;Name=FBgn0261277.1;Dir=sensecoverage=100.0;identity=99.8;matches=461;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011053
Chr1	stalkie_big_nohaplotig	exon	128222996	128223096	100	-	.	Parent=FBgn0261277.1.mrna1;Target=FBgn0261277.1 362 462 +
Chr1	stalkie_big_nohaplotig	exon	128223163	128223276	99	-	.	Parent=FBgn0261277.1.mrna1;Target=FBgn0261277.1 248 361 +
Chr1	stalkie_big_nohaplotig	exon	128226029	128226202	100	-	.	Parent=FBgn0261277.1.mrna1;Target=FBgn0261277.1 74 247 +
Chr1	stalkie_big_nohaplotig	exon	128226733	128226805	100	-	.	Parent=FBgn0261277.1.mrna1;Target=FBgn0261277.1 1 73 +
Chr1	stalkie_big_nohaplotig	CDS	128222996	128223096	.	-	2	Parent=FBgn0261277.1.mrna1;Target=FBgn0261277.1 362 462 +
Chr1	stalkie_big_nohaplotig	CDS	128223163	128223276	.	-	2	Parent=FBgn0261277.1.mrna1;Target=FBgn0261277.1 248 361 +
Chr1	stalkie_big_nohaplotig	CDS	128226029	128226202	.	-	2	Parent=FBgn0261277.1.mrna1;Target=FBgn0261277.1 74 247 +
Chr1	stalkie_big_nohaplotig	CDS	128226733	128226805	.	-	0	Parent=FBgn0261277.1.mrna1;Target=FBgn0261277.1 1 73 +
Chr1	gffcl	locus	128227788	128231626	.	+	.	ID=RLOC_00011054;geneIDs=FBgn0031878.1.path1;transcripts=FBgn0031878.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128227788	128231626	.	+	.	ID=FBgn0031878.1.mrna1;geneID=FBgn0031878.1.path1;Name=FBgn0031878.1;Dir=sensecoverage=100.0;identity=100.0;matches=1674;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011054
Chr1	stalkie_big_nohaplotig	exon	128227788	128227950	100	+	.	Parent=FBgn0031878.1.mrna1;Target=FBgn0031878.1 1 163 +
Chr1	stalkie_big_nohaplotig	exon	128228007	128228885	100	+	.	Parent=FBgn0031878.1.mrna1;Target=FBgn0031878.1 164 1042 +
Chr1	stalkie_big_nohaplotig	exon	128228961	128229343	100	+	.	Parent=FBgn0031878.1.mrna1;Target=FBgn0031878.1 1043 1425 +
Chr1	stalkie_big_nohaplotig	exon	128231378	128231626	100	+	.	Parent=FBgn0031878.1.mrna1;Target=FBgn0031878.1 1426 1674 +
Chr1	stalkie_big_nohaplotig	CDS	128227788	128227950	.	+	0	Parent=FBgn0031878.1.mrna1;Target=FBgn0031878.1 1 163 +
Chr1	stalkie_big_nohaplotig	CDS	128228007	128228885	.	+	2	Parent=FBgn0031878.1.mrna1;Target=FBgn0031878.1 164 1042 +
Chr1	stalkie_big_nohaplotig	CDS	128228961	128229343	.	+	2	Parent=FBgn0031878.1.mrna1;Target=FBgn0031878.1 1043 1425 +
Chr1	stalkie_big_nohaplotig	CDS	128231378	128231626	.	+	0	Parent=FBgn0031878.1.mrna1;Target=FBgn0031878.1 1426 1674 +
Chr1	gffcl	locus	128232105	128234400	.	-	.	ID=RLOC_00011055;geneIDs=comp161119_c0_seq1.path1;transcripts=comp161119_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128232105	128234400	.	-	.	ID=comp161119_c0_seq1.mrna1;geneID=comp161119_c0_seq1.path1;Name=comp161119_c0_seq1;Dir=antisensecoverage=100.0;identity=96.0;matches=2126;mismatches=35;indels=53;unknowns=0;locus=RLOC_00011055
Chr1	stalkie_big_nohaplotig	exon	128232105	128233818	95	-	.	Parent=comp161119_c0_seq1.mrna1;Target=comp161119_c0_seq1 1 1758 -
Chr1	stalkie_big_nohaplotig	exon	128233876	128234146	99	-	.	Parent=comp161119_c0_seq1.mrna1;Target=comp161119_c0_seq1 1759 2030 -
Chr1	stalkie_big_nohaplotig	exon	128234225	128234400	92	-	.	Parent=comp161119_c0_seq1.mrna1;Target=comp161119_c0_seq1 2031 2214 -
Chr1	stalkie_big_nohaplotig	CDS	128233989	128234146	.	-	0	Parent=comp161119_c0_seq1.mrna1;Target=comp161119_c0_seq1 1872 2030 .
Chr1	stalkie_big_nohaplotig	CDS	128234225	128234239	.	-	0	Parent=comp161119_c0_seq1.mrna1;Target=comp161119_c0_seq1 2031 2045 .
Chr1	gffcl	locus	128258756	128297440	.	+	.	ID=RLOC_00011057;geneIDs=FBgn0004854.path1;transcripts=FBgn0004854.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128258756	128297440	.	+	.	ID=FBgn0004854.mrna1;geneID=FBgn0004854.path1;Name=FBgn0004854;Dir=sensecoverage=100.0;identity=99.8;matches=1147;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011057
Chr1	stalkie_big_nohaplotig	exon	128258756	128259137	99	+	.	Parent=FBgn0004854.mrna1;Target=FBgn0004854 1 382 +
Chr1	stalkie_big_nohaplotig	exon	128288067	128288286	100	+	.	Parent=FBgn0004854.mrna1;Target=FBgn0004854 383 602 +
Chr1	stalkie_big_nohaplotig	exon	128296894	128297440	99	+	.	Parent=FBgn0004854.mrna1;Target=FBgn0004854 603 1149 +
Chr1	stalkie_big_nohaplotig	CDS	128258756	128259137	.	+	0	Parent=FBgn0004854.mrna1;Target=FBgn0004854 1 382 +
Chr1	stalkie_big_nohaplotig	CDS	128288067	128288286	.	+	2	Parent=FBgn0004854.mrna1;Target=FBgn0004854 383 602 +
Chr1	stalkie_big_nohaplotig	CDS	128296894	128297440	.	+	1	Parent=FBgn0004854.mrna1;Target=FBgn0004854 603 1149 +
Chr1	gffcl	locus	128290089	128324238	.	+	.	ID=RLOC_00011058;geneIDs=comp163473_c7_seq1.path1;transcripts=comp163473_c7_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128290089	128324238	.	+	.	ID=comp163473_c7_seq1.mrna1;geneID=comp163473_c7_seq1.path1;Name=comp163473_c7_seq1;Dir=indeterminatecoverage=67.9;identity=97.6;matches=3209;mismatches=64;indels=14;unknowns=0;Target=comp163473_c7_seq1 709 584 .;locus=RLOC_00011058
Chr1	stalkie_big_nohaplotig	exon	128290089	128290096	100	+	.	Parent=comp163473_c7_seq1.mrna1;Target=comp163473_c7_seq1 226 219 .
Chr1	stalkie_big_nohaplotig	exon	128293176	128293183	100	+	.	Parent=comp163473_c7_seq1.mrna1;Target=comp163473_c7_seq1 240 233 .
Chr1	stalkie_big_nohaplotig	exon	128295617	128295652	65	+	.	Parent=comp163473_c7_seq1.mrna1;Target=comp163473_c7_seq1 278 241 .
Chr1	stalkie_big_nohaplotig	exon	128297914	128297922	100	+	.	Parent=comp163473_c7_seq1.mrna1;Target=comp163473_c7_seq1 287 279 .
Chr1	stalkie_big_nohaplotig	exon	128298011	128298017	100	+	.	Parent=comp163473_c7_seq1.mrna1;Target=comp163473_c7_seq1 294 288 .
Chr1	stalkie_big_nohaplotig	exon	128298029	128298036	100	+	.	Parent=comp163473_c7_seq1.mrna1;Target=comp163473_c7_seq1 351 344 .
Chr1	stalkie_big_nohaplotig	exon	128305582	128305586	100	+	.	Parent=comp163473_c7_seq1.mrna1;Target=comp163473_c7_seq1 356 352 .
Chr1	stalkie_big_nohaplotig	exon	128320284	128320356	57	+	.	Parent=comp163473_c7_seq1.mrna1;Target=comp163473_c7_seq1 427 357 .
Chr1	stalkie_big_nohaplotig	exon	128321114	128324238	98	+	.	Parent=comp163473_c7_seq1.mrna1;Target=comp163473_c7_seq1 3570 444 .
Chr1	stalkie_big_nohaplotig	CDS	128321254	128321378	.	+	0	Parent=comp163473_c7_seq1.mrna1
Chr1	gffcl	locus	128316577	128317718	.	+	.	ID=RLOC_00011059;geneIDs=ORF1686.path1;transcripts=ORF1686.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128316577	128317718	.	+	.	ID=ORF1686.mrna1;geneID=ORF1686.path1;Name=ORF1686;Dir=sensecoverage=100.0;identity=99.4;matches=1020;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011059
Chr1	stalkie_big_nohaplotig	exon	128316577	128316604	96	+	.	Parent=ORF1686.mrna1;Target=ORF1686 1 28 +
Chr1	stalkie_big_nohaplotig	exon	128316666	128317517	99	+	.	Parent=ORF1686.mrna1;Target=ORF1686 29 880 +
Chr1	stalkie_big_nohaplotig	exon	128317573	128317718	98	+	.	Parent=ORF1686.mrna1;Target=ORF1686 881 1026 +
Chr1	stalkie_big_nohaplotig	CDS	128316577	128316604	.	+	0	Parent=ORF1686.mrna1;Target=ORF1686 1 28 +
Chr1	stalkie_big_nohaplotig	CDS	128316666	128317517	.	+	2	Parent=ORF1686.mrna1;Target=ORF1686 29 880 +
Chr1	stalkie_big_nohaplotig	CDS	128317573	128317718	.	+	2	Parent=ORF1686.mrna1;Target=ORF1686 881 1026 +
Chr1	gffcl	locus	128362662	128363237	.	+	.	ID=RLOC_00011060;geneIDs=comp81792_c0_seq1.path1;transcripts=comp81792_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128362662	128363237	.	+	.	ID=comp81792_c0_seq1.mrna1;geneID=comp81792_c0_seq1.path1;Name=comp81792_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.4;matches=561;mismatches=14;indels=1;unknowns=0;Target=comp81792_c0_seq1 575 1 .;CDS_Target=comp81792_c0_seq1 441 358 .;locus=RLOC_00011060
Chr1	stalkie_big_nohaplotig	exon	128362662	128363237	97	+	.	Parent=comp81792_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	128363019	128363102	.	+	0	Parent=comp81792_c0_seq1.mrna1
Chr1	gffcl	locus	128370891	128372669	.	+	.	ID=RLOC_00011061;geneIDs=comp157891_c0_seq1.path1;transcripts=comp157891_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128370891	128372669	.	+	.	ID=comp157891_c0_seq1.mrna1;geneID=comp157891_c0_seq1.path1;Name=comp157891_c0_seq1;Dir=sensecoverage=100.0;identity=98.6;matches=1020;mismatches=10;indels=4;unknowns=0;locus=RLOC_00011061
Chr1	stalkie_big_nohaplotig	exon	128370891	128371171	99	+	.	Parent=comp157891_c0_seq1.mrna1;Target=comp157891_c0_seq1 1 281 +
Chr1	stalkie_big_nohaplotig	exon	128371248	128371630	98	+	.	Parent=comp157891_c0_seq1.mrna1;Target=comp157891_c0_seq1 282 664 +
Chr1	stalkie_big_nohaplotig	exon	128372300	128372669	97	+	.	Parent=comp157891_c0_seq1.mrna1;Target=comp157891_c0_seq1 665 1030 +
Chr1	stalkie_big_nohaplotig	CDS	128370892	128371171	.	+	0	Parent=comp157891_c0_seq1.mrna1;Target=comp157891_c0_seq1 2 281 +
Chr1	stalkie_big_nohaplotig	CDS	128371248	128371630	.	+	2	Parent=comp157891_c0_seq1.mrna1;Target=comp157891_c0_seq1 282 664 +
Chr1	stalkie_big_nohaplotig	CDS	128372300	128372551	.	+	0	Parent=comp157891_c0_seq1.mrna1;Target=comp157891_c0_seq1 665 916 +
Chr1	gffcl	locus	128437488	128440279	.	-	.	ID=RLOC_00011062;geneIDs=ORF770.path1;transcripts=ORF770.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128437488	128440279	.	-	.	ID=ORF770.mrna1;geneID=ORF770.path1;Name=ORF770;Dir=sensecoverage=100.0;identity=99.2;matches=1435;mismatches=11;indels=0;unknowns=0;locus=RLOC_00011062
Chr1	stalkie_big_nohaplotig	exon	128437488	128437753	100	-	.	Parent=ORF770.mrna1;Target=ORF770 1181 1446 +
Chr1	stalkie_big_nohaplotig	exon	128437812	128438555	99	-	.	Parent=ORF770.mrna1;Target=ORF770 437 1180 +
Chr1	stalkie_big_nohaplotig	exon	128438663	128438758	98	-	.	Parent=ORF770.mrna1;Target=ORF770 341 436 +
Chr1	stalkie_big_nohaplotig	exon	128439891	128439986	97	-	.	Parent=ORF770.mrna1;Target=ORF770 245 340 +
Chr1	stalkie_big_nohaplotig	exon	128440036	128440279	99	-	.	Parent=ORF770.mrna1;Target=ORF770 1 244 +
Chr1	stalkie_big_nohaplotig	CDS	128437488	128437753	.	-	2	Parent=ORF770.mrna1;Target=ORF770 1181 1446 +
Chr1	stalkie_big_nohaplotig	CDS	128437812	128438555	.	-	2	Parent=ORF770.mrna1;Target=ORF770 437 1180 +
Chr1	stalkie_big_nohaplotig	CDS	128438663	128438758	.	-	2	Parent=ORF770.mrna1;Target=ORF770 341 436 +
Chr1	stalkie_big_nohaplotig	CDS	128439891	128439986	.	-	2	Parent=ORF770.mrna1;Target=ORF770 245 340 +
Chr1	stalkie_big_nohaplotig	CDS	128440036	128440279	.	-	0	Parent=ORF770.mrna1;Target=ORF770 1 244 +
Chr1	gffcl	locus	128462832	130380962	.	-	.	ID=RLOC_00011063;geneIDs=comp148585_c1_seq1.path1;transcripts=comp148585_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128462832	130380962	.	-	.	ID=comp148585_c1_seq1.mrna1;geneID=comp148585_c1_seq1.path1;Name=comp148585_c1_seq1;Dir=sensecoverage=77.8;identity=90.1;matches=382;mismatches=29;indels=13;unknowns=0;locus=RLOC_00011063
Chr1	stalkie_big_nohaplotig	exon	128462832	128462852	95	-	.	Parent=comp148585_c1_seq1.mrna1;Target=comp148585_c1_seq1 496 516 +
Chr1	stalkie_big_nohaplotig	exon	128468786	128468788	100	-	.	Parent=comp148585_c1_seq1.mrna1;Target=comp148585_c1_seq1 493 495 +
Chr1	stalkie_big_nohaplotig	exon	128475763	128475770	100	-	.	Parent=comp148585_c1_seq1.mrna1;Target=comp148585_c1_seq1 485 492 +
Chr1	stalkie_big_nohaplotig	exon	130376471	130376628	90	-	.	Parent=comp148585_c1_seq1.mrna1;Target=comp148585_c1_seq1 315 484 +
Chr1	stalkie_big_nohaplotig	exon	130380666	130380746	91	-	.	Parent=comp148585_c1_seq1.mrna1;Target=comp148585_c1_seq1 234 314 +
Chr1	stalkie_big_nohaplotig	exon	130380822	130380962	87	-	.	Parent=comp148585_c1_seq1.mrna1;Target=comp148585_c1_seq1 94 233 +
Chr1	stalkie_big_nohaplotig	CDS	130376603	130376628	.	-	2	Parent=comp148585_c1_seq1.mrna1;Target=comp148585_c1_seq1 315 343 +
Chr1	stalkie_big_nohaplotig	CDS	130380666	130380746	.	-	2	Parent=comp148585_c1_seq1.mrna1;Target=comp148585_c1_seq1 234 314 +
Chr1	stalkie_big_nohaplotig	CDS	130380822	130380876	.	-	0	Parent=comp148585_c1_seq1.mrna1;Target=comp148585_c1_seq1 179 233 +
Chr1	gffcl	locus	128507647	128511717	.	+	.	ID=RLOC_00011064;geneIDs=FBgn0011758.path1;transcripts=FBgn0011758.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128507647	128511717	.	+	.	ID=FBgn0011758.mrna1;geneID=FBgn0011758.path1;Name=FBgn0011758;Dir=sensecoverage=100.0;identity=99.7;matches=772;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011064
Chr1	stalkie_big_nohaplotig	exon	128507647	128507876	100	+	.	Parent=FBgn0011758.mrna1;Target=FBgn0011758 1 230 +
Chr1	stalkie_big_nohaplotig	exon	128511174	128511717	99	+	.	Parent=FBgn0011758.mrna1;Target=FBgn0011758 231 774 +
Chr1	stalkie_big_nohaplotig	CDS	128507647	128507876	.	+	0	Parent=FBgn0011758.mrna1;Target=FBgn0011758 1 230 +
Chr1	stalkie_big_nohaplotig	CDS	128511174	128511717	.	+	1	Parent=FBgn0011758.mrna1;Target=FBgn0011758 231 774 +
Chr1	gffcl	locus	128525741	128526660	.	+	.	ID=RLOC_00011065;geneIDs=comp163779_c0_seq1.path2;transcripts=comp163779_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	128525741	128526660	.	+	.	ID=comp163779_c0_seq1.mrna2;geneID=comp163779_c0_seq1.path2;Name=comp163779_c0_seq1;Dir=indeterminatecoverage=94.6;identity=96.0;matches=887;mismatches=33;indels=4;unknowns=0;Target=comp163779_c0_seq1 924 1 .;CDS_Target=comp163779_c0_seq1 368 165 .;locus=RLOC_00011065
Chr1	stalkie_big_nohaplotig	exon	128525741	128526660	95	+	.	Parent=comp163779_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	128525905	128526108	.	+	0	Parent=comp163779_c0_seq1.mrna2
Chr1	gffcl	locus	128569679	128649878	.	-	.	ID=RLOC_00011066;geneIDs=FBgn0030839.1.path1,comp153674_c0_seq1.path1;transcripts=comp153674_c0_seq1.mrna1,FBgn0030839.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128569679	128649878	.	-	.	ID=comp153674_c0_seq1.mrna1;geneID=comp153674_c0_seq1.path1;Name=comp153674_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=660;mismatches=7;indels=1;unknowns=0;Target=comp153674_c0_seq1 272 144 .;locus=RLOC_00011066
Chr1	stalkie_big_nohaplotig	exon	128569679	128569903	98	-	.	Parent=comp153674_c0_seq1.mrna1;Target=comp153674_c0_seq1 668 444 .
Chr1	stalkie_big_nohaplotig	exon	128604255	128604257	100	-	.	Parent=comp153674_c0_seq1.mrna1;Target=comp153674_c0_seq1 443 441 .
Chr1	stalkie_big_nohaplotig	exon	128611665	128611669	100	-	.	Parent=comp153674_c0_seq1.mrna1;Target=comp153674_c0_seq1 440 436 .
Chr1	stalkie_big_nohaplotig	exon	128614258	128614263	100	-	.	Parent=comp153674_c0_seq1.mrna1;Target=comp153674_c0_seq1 435 430 .
Chr1	stalkie_big_nohaplotig	exon	128615126	128615128	100	-	.	Parent=comp153674_c0_seq1.mrna1;Target=comp153674_c0_seq1 429 427 .
Chr1	stalkie_big_nohaplotig	exon	128617084	128617086	100	-	.	Parent=comp153674_c0_seq1.mrna1;Target=comp153674_c0_seq1 426 424 .
Chr1	stalkie_big_nohaplotig	exon	128620767	128620768	100	-	.	Parent=comp153674_c0_seq1.mrna1;Target=comp153674_c0_seq1 423 422 .
Chr1	stalkie_big_nohaplotig	exon	128623950	128623957	100	-	.	Parent=comp153674_c0_seq1.mrna1;Target=comp153674_c0_seq1 421 414 .
Chr1	stalkie_big_nohaplotig	exon	128649467	128649878	98	-	.	Parent=comp153674_c0_seq1.mrna1;Target=comp153674_c0_seq1 413 1 .
Chr1	stalkie_big_nohaplotig	CDS	128649608	128649736	.	-	0	Parent=comp153674_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128623694	128646800	.	-	.	ID=FBgn0030839.1.mrna1;geneID=FBgn0030839.1.path1;Name=FBgn0030839.1;Dir=sensecoverage=100.0;identity=99.3;matches=1800;mismatches=12;indels=0;unknowns=0;locus=RLOC_00011066
Chr1	stalkie_big_nohaplotig	exon	128623694	128624906	99	-	.	Parent=FBgn0030839.1.mrna1;Target=FBgn0030839.1 600 1812 +
Chr1	stalkie_big_nohaplotig	exon	128637208	128637382	100	-	.	Parent=FBgn0030839.1.mrna1;Target=FBgn0030839.1 425 599 +
Chr1	stalkie_big_nohaplotig	exon	128640250	128640398	97	-	.	Parent=FBgn0030839.1.mrna1;Target=FBgn0030839.1 276 424 +
Chr1	stalkie_big_nohaplotig	exon	128640471	128640702	99	-	.	Parent=FBgn0030839.1.mrna1;Target=FBgn0030839.1 44 275 +
Chr1	stalkie_big_nohaplotig	exon	128646758	128646800	100	-	.	Parent=FBgn0030839.1.mrna1;Target=FBgn0030839.1 1 43 +
Chr1	stalkie_big_nohaplotig	CDS	128623694	128624906	.	-	1	Parent=FBgn0030839.1.mrna1;Target=FBgn0030839.1 600 1812 +
Chr1	stalkie_big_nohaplotig	CDS	128637208	128637382	.	-	2	Parent=FBgn0030839.1.mrna1;Target=FBgn0030839.1 425 599 +
Chr1	stalkie_big_nohaplotig	CDS	128640250	128640398	.	-	1	Parent=FBgn0030839.1.mrna1;Target=FBgn0030839.1 276 424 +
Chr1	stalkie_big_nohaplotig	CDS	128640471	128640702	.	-	2	Parent=FBgn0030839.1.mrna1;Target=FBgn0030839.1 44 275 +
Chr1	stalkie_big_nohaplotig	CDS	128646758	128646800	.	-	0	Parent=FBgn0030839.1.mrna1;Target=FBgn0030839.1 1 43 +
Chr1	gffcl	locus	128574857	128575819	.	.	.	ID=RLOC_00011067;geneIDs=comp116115_c0_seq1.path1,comp135496_c0_seq1.path1;transcripts=comp135496_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128575159	128575819	.	+	.	ID=comp135496_c0_seq1.mrna1;geneID=comp135496_c0_seq1.path1;Name=comp135496_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=659;mismatches=2;indels=0;unknowns=0;Target=comp135496_c0_seq1 661 1 .;CDS_Target=comp135496_c0_seq1 527 453 .;locus=RLOC_00011067
Chr1	stalkie_big_nohaplotig	exon	128575159	128575819	99	+	.	Parent=comp135496_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	128575611	128575685	.	+	0	Parent=comp135496_c0_seq1.mrna1
Chr1	gffcl	locus	128579301	128579893	.	+	.	ID=RLOC_00011068;geneIDs=Dp_FBgn0249362.path3;transcripts=Dp_FBgn0249362.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	128579301	128579893	.	+	.	ID=Dp_FBgn0249362.mrna3;geneID=Dp_FBgn0249362.path3;Name=Dp_FBgn0249362;Dir=indeterminatecoverage=100.0;identity=99.3;matches=590;mismatches=3;indels=1;unknowns=0;Target=Dp_FBgn0249362 594 1 .;locus=RLOC_00011068
Chr1	stalkie_big_nohaplotig	exon	128579301	128579893	99	+	.	Parent=Dp_FBgn0249362.mrna3
Chr1	stalkie_big_nohaplotig	CDS	128579301	128579893	.	+	0	Parent=Dp_FBgn0249362.mrna3
Chr1	gffcl	locus	128592588	128593162	.	-	.	ID=RLOC_00011069;geneIDs=comp144171_c0_seq1.path2;transcripts=comp144171_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	128592588	128593162	.	-	.	ID=comp144171_c0_seq1.mrna2;geneID=comp144171_c0_seq1.path2;Name=comp144171_c0_seq1;Dir=indeterminatecoverage=49.0;identity=97.0;matches=558;mismatches=17;indels=0;unknowns=0;Target=comp144171_c0_seq1 1174 600 .;CDS_Target=comp144171_c0_seq1 1087 710 .;locus=RLOC_00011069
Chr1	stalkie_big_nohaplotig	exon	128592588	128593162	97	-	.	Parent=comp144171_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	128592675	128593052	.	-	0	Parent=comp144171_c0_seq1.mrna2
Chr1	gffcl	locus	128608428	128609428	.	-	.	ID=RLOC_00011071;geneIDs=comp161827_c1_seq1.path1;transcripts=comp161827_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128608428	128609428	.	-	.	ID=comp161827_c1_seq1.mrna1;geneID=comp161827_c1_seq1.path1;Name=comp161827_c1_seq1;Dir=antisensecoverage=62.4;identity=90.8;matches=898;mismatches=27;indels=64;unknowns=0;locus=RLOC_00011071
Chr1	stalkie_big_nohaplotig	exon	128608428	128609020	88	-	.	Parent=comp161827_c1_seq1.mrna1;Target=comp161827_c1_seq1 587 1203 -
Chr1	stalkie_big_nohaplotig	exon	128609083	128609428	94	-	.	Parent=comp161827_c1_seq1.mrna1;Target=comp161827_c1_seq1 1204 1561 -
Chr1	stalkie_big_nohaplotig	CDS	128609003	128609020	.	-	0	Parent=comp161827_c1_seq1.mrna1;Target=comp161827_c1_seq1 1186 1203 .
Chr1	stalkie_big_nohaplotig	CDS	128609083	128609100	.	-	0	Parent=comp161827_c1_seq1.mrna1;Target=comp161827_c1_seq1 1204 1221 .
Chr1	gffcl	locus	128658131	128658416	.	-	.	ID=RLOC_00011073;geneIDs=comp151423_c0_seq1.path1;transcripts=comp151423_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128658131	128658416	.	-	.	ID=comp151423_c0_seq1.mrna1;geneID=comp151423_c0_seq1.path1;Name=comp151423_c0_seq1;Dir=indeterminatecoverage=95.3;identity=99.0;matches=283;mismatches=2;indels=1;unknowns=0;Target=comp151423_c0_seq1 299 15 .;CDS_Target=comp151423_c0_seq1 200 153 .;locus=RLOC_00011073
Chr1	stalkie_big_nohaplotig	exon	128658131	128658416	98	-	.	Parent=comp151423_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	128658230	128658277	.	-	0	Parent=comp151423_c0_seq1.mrna1
Chr1	gffcl	locus	128677565	128677715	.	-	.	ID=RLOC_00011074;geneIDs=comp88916_c0_seq1.path1;transcripts=comp88916_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128677565	128677715	.	-	.	ID=comp88916_c0_seq1.mrna1;geneID=comp88916_c0_seq1.path1;Name=comp88916_c0_seq1;Dir=indeterminatecoverage=75.5;identity=91.2;matches=146;mismatches=5;indels=9;unknowns=0;Target=comp88916_c0_seq1 160 1 .;CDS_Target=comp88916_c0_seq1 99 1 .;locus=RLOC_00011074
Chr1	stalkie_big_nohaplotig	exon	128677565	128677715	91	-	.	Parent=comp88916_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	128677618	128677715	.	-	0	Parent=comp88916_c0_seq1.mrna1
Chr1	gffcl	locus	128678511	128703118	.	-	.	ID=RLOC_00011075;geneIDs=FBgn0027602.1.path1;transcripts=FBgn0027602.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128678511	128703118	.	-	.	ID=FBgn0027602.1.mrna1;geneID=FBgn0027602.1.path1;Name=FBgn0027602.1;Dir=sensecoverage=100.0;identity=99.4;matches=1966;mismatches=11;indels=0;unknowns=0;locus=RLOC_00011075
Chr1	stalkie_big_nohaplotig	exon	128678511	128678694	98	-	.	Parent=FBgn0027602.1.mrna1;Target=FBgn0027602.1 1794 1977 +
Chr1	stalkie_big_nohaplotig	exon	128678750	128678939	98	-	.	Parent=FBgn0027602.1.mrna1;Target=FBgn0027602.1 1604 1793 +
Chr1	stalkie_big_nohaplotig	exon	128701117	128701268	98	-	.	Parent=FBgn0027602.1.mrna1;Target=FBgn0027602.1 1452 1603 +
Chr1	stalkie_big_nohaplotig	exon	128701327	128701517	100	-	.	Parent=FBgn0027602.1.mrna1;Target=FBgn0027602.1 1261 1451 +
Chr1	stalkie_big_nohaplotig	exon	128701734	128701818	98	-	.	Parent=FBgn0027602.1.mrna1;Target=FBgn0027602.1 1176 1260 +
Chr1	stalkie_big_nohaplotig	exon	128701883	128702852	99	-	.	Parent=FBgn0027602.1.mrna1;Target=FBgn0027602.1 206 1175 +
Chr1	stalkie_big_nohaplotig	exon	128702914	128703118	99	-	.	Parent=FBgn0027602.1.mrna1;Target=FBgn0027602.1 1 205 +
Chr1	stalkie_big_nohaplotig	CDS	128678511	128678694	.	-	1	Parent=FBgn0027602.1.mrna1;Target=FBgn0027602.1 1794 1977 +
Chr1	stalkie_big_nohaplotig	CDS	128678750	128678939	.	-	2	Parent=FBgn0027602.1.mrna1;Target=FBgn0027602.1 1604 1793 +
Chr1	stalkie_big_nohaplotig	CDS	128701117	128701268	.	-	1	Parent=FBgn0027602.1.mrna1;Target=FBgn0027602.1 1452 1603 +
Chr1	stalkie_big_nohaplotig	CDS	128701327	128701517	.	-	0	Parent=FBgn0027602.1.mrna1;Target=FBgn0027602.1 1261 1451 +
Chr1	stalkie_big_nohaplotig	CDS	128701734	128701818	.	-	1	Parent=FBgn0027602.1.mrna1;Target=FBgn0027602.1 1176 1260 +
Chr1	stalkie_big_nohaplotig	CDS	128701883	128702852	.	-	2	Parent=FBgn0027602.1.mrna1;Target=FBgn0027602.1 206 1175 +
Chr1	stalkie_big_nohaplotig	CDS	128702914	128703118	.	-	0	Parent=FBgn0027602.1.mrna1;Target=FBgn0027602.1 1 205 +
Chr1	gffcl	locus	128689541	128690085	.	-	.	ID=RLOC_00011076;geneIDs=FBgn0022943.1.path1;transcripts=FBgn0022943.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128689541	128690085	.	-	.	ID=FBgn0022943.1.mrna1;geneID=FBgn0022943.1.path1;Name=FBgn0022943.1;Dir=sensecoverage=100.0;identity=98.1;matches=424;mismatches=8;indels=0;unknowns=0;locus=RLOC_00011076
Chr1	stalkie_big_nohaplotig	exon	128689541	128689706	98	-	.	Parent=FBgn0022943.1.mrna1;Target=FBgn0022943.1 267 432 +
Chr1	stalkie_big_nohaplotig	exon	128689766	128689983	97	-	.	Parent=FBgn0022943.1.mrna1;Target=FBgn0022943.1 49 266 +
Chr1	stalkie_big_nohaplotig	exon	128690038	128690085	97	-	.	Parent=FBgn0022943.1.mrna1;Target=FBgn0022943.1 1 48 +
Chr1	stalkie_big_nohaplotig	CDS	128689541	128689706	.	-	1	Parent=FBgn0022943.1.mrna1;Target=FBgn0022943.1 267 432 +
Chr1	stalkie_big_nohaplotig	CDS	128689766	128689983	.	-	0	Parent=FBgn0022943.1.mrna1;Target=FBgn0022943.1 49 266 +
Chr1	stalkie_big_nohaplotig	CDS	128690038	128690085	.	-	0	Parent=FBgn0022943.1.mrna1;Target=FBgn0022943.1 1 48 +
Chr1	gffcl	locus	128709377	128710060	.	.	.	ID=RLOC_00011077;geneIDs=comp151360_c0_seq1.path1,comp151423_c0_seq1.path2;transcripts=comp151360_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128709377	128709801	.	-	.	ID=comp151360_c0_seq1.mrna1;geneID=comp151360_c0_seq1.path1;Name=comp151360_c0_seq1;Dir=indeterminatecoverage=98.4;identity=98.6;matches=420;mismatches=2;indels=4;unknowns=0;Target=comp151360_c0_seq1 429 7 .;CDS_Target=comp151360_c0_seq1 344 249 .;locus=RLOC_00011077
Chr1	stalkie_big_nohaplotig	exon	128709377	128709801	98	-	.	Parent=comp151360_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	128709461	128709556	.	-	0	Parent=comp151360_c0_seq1.mrna1
Chr1	gffcl	locus	128856132	128856592	.	-	.	ID=RLOC_00011080;geneIDs=comp112657_c0_seq1.path1;transcripts=comp112657_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128856132	128856592	.	-	.	ID=comp112657_c0_seq1.mrna1;geneID=comp112657_c0_seq1.path1;Name=comp112657_c0_seq1;Dir=indeterminatecoverage=99.1;identity=100.0;matches=461;mismatches=0;indels=0;unknowns=0;Target=comp112657_c0_seq1 461 1 .;CDS_Target=comp112657_c0_seq1 253 161 .;locus=RLOC_00011080
Chr1	stalkie_big_nohaplotig	exon	128856132	128856592	100	-	.	Parent=comp112657_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	128856340	128856432	.	-	0	Parent=comp112657_c0_seq1.mrna1
Chr1	gffcl	locus	128932604	128933095	.	+	.	ID=RLOC_00011082;geneIDs=comp157261_c0_seq1.path1;transcripts=comp157261_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128932604	128933095	.	+	.	ID=comp157261_c0_seq1.mrna1;geneID=comp157261_c0_seq1.path1;Name=comp157261_c0_seq1;Dir=indeterminatecoverage=17.4;identity=99.0;matches=487;mismatches=5;indels=0;unknowns=0;Target=comp157261_c0_seq1 2828 2337 .;CDS_Target=comp157261_c0_seq1 2698 2615 .;locus=RLOC_00011082
Chr1	stalkie_big_nohaplotig	exon	128932604	128933095	98	+	.	Parent=comp157261_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	128932882	128932965	.	+	0	Parent=comp157261_c0_seq1.mrna1
Chr1	gffcl	locus	128949625	128953858	.	+	.	ID=RLOC_00011083;geneIDs=CPIJ014312.path1,CPIJ014312.1.path1,comp160322_c1_seq1.path1;transcripts=comp160322_c1_seq1.mrna1,CPIJ014312.mrna1,CPIJ014312.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128949625	128951883	.	+	.	ID=comp160322_c1_seq1.mrna1;geneID=comp160322_c1_seq1.path1;Name=comp160322_c1_seq1;Dir=antisensecoverage=99.2;identity=97.3;matches=2149;mismatches=56;indels=4;unknowns=0;locus=RLOC_00011083
Chr1	stalkie_big_nohaplotig	exon	128949625	128950468	98	+	.	Parent=comp160322_c1_seq1.mrna1;Target=comp160322_c1_seq1 1383 2226 -
Chr1	stalkie_big_nohaplotig	exon	128950522	128951883	96	+	.	Parent=comp160322_c1_seq1.mrna1;Target=comp160322_c1_seq1 19 1382 -
Chr1	stalkie_big_nohaplotig	CDS	128949821	128950468	.	+	0	Parent=comp160322_c1_seq1.mrna1;Target=comp160322_c1_seq1 1383 2030 .
Chr1	stalkie_big_nohaplotig	CDS	128950522	128950758	.	+	0	Parent=comp160322_c1_seq1.mrna1;Target=comp160322_c1_seq1 1146 1382 .
Chr1	stalkie_big_nohaplotig	mRNA	128949770	128952338	.	+	.	ID=CPIJ014312.mrna1;geneID=CPIJ014312.path1;Name=CPIJ014312;Dir=sensecoverage=100.0;identity=99.2;matches=1259;mismatches=10;indels=0;unknowns=0;locus=RLOC_00011083
Chr1	stalkie_big_nohaplotig	exon	128949770	128950468	98	+	.	Parent=CPIJ014312.mrna1;Target=CPIJ014312 1 699 +
Chr1	stalkie_big_nohaplotig	exon	128950522	128950754	100	+	.	Parent=CPIJ014312.mrna1;Target=CPIJ014312 700 932 +
Chr1	stalkie_big_nohaplotig	exon	128951938	128952257	99	+	.	Parent=CPIJ014312.mrna1;Target=CPIJ014312 933 1252 +
Chr1	stalkie_big_nohaplotig	exon	128952322	128952338	100	+	.	Parent=CPIJ014312.mrna1;Target=CPIJ014312 1253 1269 +
Chr1	stalkie_big_nohaplotig	CDS	128949770	128950468	.	+	0	Parent=CPIJ014312.mrna1;Target=CPIJ014312 1 699 +
Chr1	stalkie_big_nohaplotig	CDS	128950522	128950754	.	+	0	Parent=CPIJ014312.mrna1;Target=CPIJ014312 700 932 +
Chr1	stalkie_big_nohaplotig	CDS	128951938	128952257	.	+	1	Parent=CPIJ014312.mrna1;Target=CPIJ014312 933 1252 +
Chr1	stalkie_big_nohaplotig	CDS	128952322	128952338	.	+	2	Parent=CPIJ014312.mrna1;Target=CPIJ014312 1253 1269 +
Chr1	stalkie_big_nohaplotig	mRNA	128949770	128953858	.	+	.	ID=CPIJ014312.1.mrna1;geneID=CPIJ014312.1.path1;Name=CPIJ014312.1;Dir=sensecoverage=100.0;identity=99.5;matches=1916;mismatches=10;indels=0;unknowns=0;locus=RLOC_00011083
Chr1	stalkie_big_nohaplotig	exon	128949770	128950468	98	+	.	Parent=CPIJ014312.1.mrna1;Target=CPIJ014312.1 1 699 +
Chr1	stalkie_big_nohaplotig	exon	128950522	128950754	100	+	.	Parent=CPIJ014312.1.mrna1;Target=CPIJ014312.1 700 932 +
Chr1	stalkie_big_nohaplotig	exon	128951938	128952257	99	+	.	Parent=CPIJ014312.1.mrna1;Target=CPIJ014312.1 933 1252 +
Chr1	stalkie_big_nohaplotig	exon	128953185	128953858	100	+	.	Parent=CPIJ014312.1.mrna1;Target=CPIJ014312.1 1253 1926 +
Chr1	stalkie_big_nohaplotig	CDS	128949770	128950468	.	+	0	Parent=CPIJ014312.1.mrna1;Target=CPIJ014312.1 1 699 +
Chr1	stalkie_big_nohaplotig	CDS	128950522	128950754	.	+	0	Parent=CPIJ014312.1.mrna1;Target=CPIJ014312.1 700 932 +
Chr1	stalkie_big_nohaplotig	CDS	128951938	128952257	.	+	1	Parent=CPIJ014312.1.mrna1;Target=CPIJ014312.1 933 1252 +
Chr1	stalkie_big_nohaplotig	CDS	128953185	128953858	.	+	2	Parent=CPIJ014312.1.mrna1;Target=CPIJ014312.1 1253 1926 +
Chr1	gffcl	locus	128956175	128956410	.	+	.	ID=RLOC_00011084;geneIDs=comp450331_c0_seq1.path1;transcripts=comp450331_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128956175	128956410	.	+	.	ID=comp450331_c0_seq1.mrna1;geneID=comp450331_c0_seq1.path1;Name=comp450331_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.2;matches=234;mismatches=2;indels=0;unknowns=0;Target=comp450331_c0_seq1 236 1 .;CDS_Target=comp450331_c0_seq1 135 1 .;locus=RLOC_00011084
Chr1	stalkie_big_nohaplotig	exon	128956175	128956410	99	+	.	Parent=comp450331_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	128956175	128956309	.	+	0	Parent=comp450331_c0_seq1.mrna1
Chr1	gffcl	locus	128956758	128962528	.	+	.	ID=RLOC_00011085;geneIDs=FBgn0260006.2.path1;transcripts=FBgn0260006.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128956758	128962528	.	+	.	ID=FBgn0260006.2.mrna1;geneID=FBgn0260006.2.path1;Name=FBgn0260006.2;Dir=sensecoverage=96.9;identity=99.5;matches=3052;mismatches=15;indels=1;unknowns=0;Target=FBgn0260006.2 3 32 +;locus=RLOC_00011085
Chr1	stalkie_big_nohaplotig	exon	128956758	128957519	99	+	.	Parent=FBgn0260006.2.mrna1;Target=FBgn0260006.2 1 763 +
Chr1	stalkie_big_nohaplotig	exon	128958550	128958788	100	+	.	Parent=FBgn0260006.2.mrna1;Target=FBgn0260006.2 764 1002 +
Chr1	stalkie_big_nohaplotig	exon	128959407	128959630	99	+	.	Parent=FBgn0260006.2.mrna1;Target=FBgn0260006.2 1003 1226 +
Chr1	stalkie_big_nohaplotig	exon	128959687	128959943	98	+	.	Parent=FBgn0260006.2.mrna1;Target=FBgn0260006.2 1227 1483 +
Chr1	stalkie_big_nohaplotig	exon	128960126	128960489	98	+	.	Parent=FBgn0260006.2.mrna1;Target=FBgn0260006.2 1484 1847 +
Chr1	stalkie_big_nohaplotig	exon	128960545	128960713	99	+	.	Parent=FBgn0260006.2.mrna1;Target=FBgn0260006.2 1848 2016 +
Chr1	stalkie_big_nohaplotig	exon	128960765	128960958	100	+	.	Parent=FBgn0260006.2.mrna1;Target=FBgn0260006.2 2017 2210 +
Chr1	stalkie_big_nohaplotig	exon	128961610	128962072	100	+	.	Parent=FBgn0260006.2.mrna1;Target=FBgn0260006.2 2211 2673 +
Chr1	stalkie_big_nohaplotig	exon	128962134	128962528	99	+	.	Parent=FBgn0260006.2.mrna1;Target=FBgn0260006.2 2674 3068 +
Chr1	stalkie_big_nohaplotig	CDS	128956760	128956788	.	+	0	Parent=FBgn0260006.2.mrna1
Chr1	gffcl	locus	128964191	128966230	.	-	.	ID=RLOC_00011086;geneIDs=comp156367_c0_seq1.path1;transcripts=comp156367_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128964191	128966230	.	-	.	ID=comp156367_c0_seq1.mrna1;geneID=comp156367_c0_seq1.path1;Name=comp156367_c0_seq1;Dir=sensecoverage=73.3;identity=90.9;matches=1056;mismatches=32;indels=74;unknowns=0;Target=comp156367_c0_seq1 1042 1194 +;locus=RLOC_00011086
Chr1	stalkie_big_nohaplotig	exon	128964191	128964451	96	-	.	Parent=comp156367_c0_seq1.mrna1;Target=comp156367_c0_seq1 1301 1556 +
Chr1	stalkie_big_nohaplotig	exon	128964671	128965013	82	-	.	Parent=comp156367_c0_seq1.mrna1;Target=comp156367_c0_seq1 915 1300 +
Chr1	stalkie_big_nohaplotig	exon	128965725	128966230	94	-	.	Parent=comp156367_c0_seq1.mrna1;Target=comp156367_c0_seq1 417 914 +
Chr1	stalkie_big_nohaplotig	CDS	128964777	128964904	.	-	0	Parent=comp156367_c0_seq1.mrna1
Chr1	gffcl	locus	128966354	128998508	.	-	.	ID=RLOC_00011087;geneIDs=FBgn0031034.1.path1;transcripts=FBgn0031034.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	128966354	128998508	.	-	.	ID=FBgn0031034.1.mrna1;geneID=FBgn0031034.1.path1;Name=FBgn0031034.1;Dir=sensecoverage=100.0;identity=99.6;matches=2146;mismatches=8;indels=0;unknowns=0;locus=RLOC_00011087
Chr1	stalkie_big_nohaplotig	exon	128966354	128966542	100	-	.	Parent=FBgn0031034.1.mrna1;Target=FBgn0031034.1 1966 2154 +
Chr1	stalkie_big_nohaplotig	exon	128966601	128966943	99	-	.	Parent=FBgn0031034.1.mrna1;Target=FBgn0031034.1 1623 1965 +
Chr1	stalkie_big_nohaplotig	exon	128967020	128967145	100	-	.	Parent=FBgn0031034.1.mrna1;Target=FBgn0031034.1 1497 1622 +
Chr1	stalkie_big_nohaplotig	exon	128967238	128967431	100	-	.	Parent=FBgn0031034.1.mrna1;Target=FBgn0031034.1 1303 1496 +
Chr1	stalkie_big_nohaplotig	exon	128968934	128969266	100	-	.	Parent=FBgn0031034.1.mrna1;Target=FBgn0031034.1 970 1302 +
Chr1	stalkie_big_nohaplotig	exon	128969329	128969483	96	-	.	Parent=FBgn0031034.1.mrna1;Target=FBgn0031034.1 815 969 +
Chr1	stalkie_big_nohaplotig	exon	128969544	128969695	100	-	.	Parent=FBgn0031034.1.mrna1;Target=FBgn0031034.1 663 814 +
Chr1	stalkie_big_nohaplotig	exon	128969869	128970047	100	-	.	Parent=FBgn0031034.1.mrna1;Target=FBgn0031034.1 484 662 +
Chr1	stalkie_big_nohaplotig	exon	128972516	128972724	99	-	.	Parent=FBgn0031034.1.mrna1;Target=FBgn0031034.1 275 483 +
Chr1	stalkie_big_nohaplotig	exon	128998235	128998508	99	-	.	Parent=FBgn0031034.1.mrna1;Target=FBgn0031034.1 1 274 +
Chr1	stalkie_big_nohaplotig	CDS	128966354	128966542	.	-	0	Parent=FBgn0031034.1.mrna1;Target=FBgn0031034.1 1966 2154 +
Chr1	stalkie_big_nohaplotig	CDS	128966601	128966943	.	-	1	Parent=FBgn0031034.1.mrna1;Target=FBgn0031034.1 1623 1965 +
Chr1	stalkie_big_nohaplotig	CDS	128967020	128967145	.	-	1	Parent=FBgn0031034.1.mrna1;Target=FBgn0031034.1 1497 1622 +
Chr1	stalkie_big_nohaplotig	CDS	128967238	128967431	.	-	0	Parent=FBgn0031034.1.mrna1;Target=FBgn0031034.1 1303 1496 +
Chr1	stalkie_big_nohaplotig	CDS	128968934	128969266	.	-	0	Parent=FBgn0031034.1.mrna1;Target=FBgn0031034.1 970 1302 +
Chr1	stalkie_big_nohaplotig	CDS	128969329	128969483	.	-	2	Parent=FBgn0031034.1.mrna1;Target=FBgn0031034.1 815 969 +
Chr1	stalkie_big_nohaplotig	CDS	128969544	128969695	.	-	1	Parent=FBgn0031034.1.mrna1;Target=FBgn0031034.1 663 814 +
Chr1	stalkie_big_nohaplotig	CDS	128969869	128970047	.	-	0	Parent=FBgn0031034.1.mrna1;Target=FBgn0031034.1 484 662 +
Chr1	stalkie_big_nohaplotig	CDS	128972516	128972724	.	-	2	Parent=FBgn0031034.1.mrna1;Target=FBgn0031034.1 275 483 +
Chr1	stalkie_big_nohaplotig	CDS	128998235	128998508	.	-	0	Parent=FBgn0031034.1.mrna1;Target=FBgn0031034.1 1 274 +
Chr1	gffcl	locus	129008400	129008938	.	-	.	ID=RLOC_00011088;geneIDs=comp148452_c1_seq1.path1;transcripts=comp148452_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129008400	129008938	.	-	.	ID=comp148452_c1_seq1.mrna1;geneID=comp148452_c1_seq1.path1;Name=comp148452_c1_seq1;Dir=indeterminatecoverage=100.0;identity=96.5;matches=520;mismatches=19;indels=0;unknowns=0;Target=comp148452_c1_seq1 539 1 .;CDS_Target=comp148452_c1_seq1 55 2 .;locus=RLOC_00011088
Chr1	stalkie_big_nohaplotig	exon	129008400	129008938	96	-	.	Parent=comp148452_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129008884	129008937	.	-	0	Parent=comp148452_c1_seq1.mrna1
Chr1	gffcl	locus	129009111	129030689	.	-	.	ID=RLOC_00011089;geneIDs=comp53797_c0_seq1.path1;transcripts=comp53797_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129009111	129030689	.	-	.	ID=comp53797_c0_seq1.mrna1;geneID=comp53797_c0_seq1.path1;Name=comp53797_c0_seq1;Dir=indeterminatecoverage=57.3;identity=100.0;matches=121;mismatches=0;indels=0;unknowns=0;Target=comp53797_c0_seq1 195 136 .;locus=RLOC_00011089
Chr1	stalkie_big_nohaplotig	exon	129009111	129009218	100	-	.	Parent=comp53797_c0_seq1.mrna1;Target=comp53797_c0_seq1 211 104 .
Chr1	stalkie_big_nohaplotig	exon	129017354	129017357	100	-	.	Parent=comp53797_c0_seq1.mrna1;Target=comp53797_c0_seq1 103 100 .
Chr1	stalkie_big_nohaplotig	exon	129024104	129024106	100	-	.	Parent=comp53797_c0_seq1.mrna1;Target=comp53797_c0_seq1 99 97 .
Chr1	stalkie_big_nohaplotig	exon	129030684	129030689	100	-	.	Parent=comp53797_c0_seq1.mrna1;Target=comp53797_c0_seq1 96 91 .
Chr1	stalkie_big_nohaplotig	CDS	129009127	129009186	.	-	0	Parent=comp53797_c0_seq1.mrna1
Chr1	gffcl	locus	129017443	129018186	.	-	.	ID=RLOC_00011091;geneIDs=comp149675_c0_seq1.path1;transcripts=comp149675_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129017443	129018186	.	-	.	ID=comp149675_c0_seq1.mrna1;geneID=comp149675_c0_seq1.path1;Name=comp149675_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.5;matches=736;mismatches=8;indels=11;unknowns=0;Target=comp149675_c0_seq1 756 2 .;CDS_Target=comp149675_c0_seq1 340 2 .;locus=RLOC_00011091
Chr1	stalkie_big_nohaplotig	exon	129017443	129018186	97	-	.	Parent=comp149675_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129017849	129018186	.	-	0	Parent=comp149675_c0_seq1.mrna1
Chr1	gffcl	locus	129025850	130832548	.	-	.	ID=RLOC_00011092;geneIDs=FBgn0022786.1.path1,comp134738_c0_seq1.path1;transcripts=comp134738_c0_seq1.mrna1,FBgn0022786.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129025850	130832548	.	-	.	ID=comp134738_c0_seq1.mrna1;geneID=comp134738_c0_seq1.path1;Name=comp134738_c0_seq1;Dir=sensecoverage=100.0;identity=99.2;matches=619;mismatches=4;indels=1;unknowns=0;locus=RLOC_00011092
Chr1	stalkie_big_nohaplotig	exon	129025850	129025869	100	-	.	Parent=comp134738_c0_seq1.mrna1;Target=comp134738_c0_seq1 624 643 +
Chr1	stalkie_big_nohaplotig	exon	129026116	129026126	100	-	.	Parent=comp134738_c0_seq1.mrna1;Target=comp134738_c0_seq1 596 606 +
Chr1	stalkie_big_nohaplotig	exon	129032405	129032407	100	-	.	Parent=comp134738_c0_seq1.mrna1;Target=comp134738_c0_seq1 593 595 +
Chr1	stalkie_big_nohaplotig	exon	129046458	129046463	100	-	.	Parent=comp134738_c0_seq1.mrna1;Target=comp134738_c0_seq1 587 592 +
Chr1	stalkie_big_nohaplotig	exon	129048784	129048787	100	-	.	Parent=comp134738_c0_seq1.mrna1;Target=comp134738_c0_seq1 583 586 +
Chr1	stalkie_big_nohaplotig	exon	129062921	129062923	100	-	.	Parent=comp134738_c0_seq1.mrna1;Target=comp134738_c0_seq1 580 582 +
Chr1	stalkie_big_nohaplotig	exon	129068774	129068787	85	-	.	Parent=comp134738_c0_seq1.mrna1;Target=comp134738_c0_seq1 563 575 +
Chr1	stalkie_big_nohaplotig	exon	129077015	129077021	100	-	.	Parent=comp134738_c0_seq1.mrna1;Target=comp134738_c0_seq1 556 562 +
Chr1	stalkie_big_nohaplotig	exon	129078055	129078059	100	-	.	Parent=comp134738_c0_seq1.mrna1;Target=comp134738_c0_seq1 551 555 +
Chr1	stalkie_big_nohaplotig	exon	129080573	129080577	100	-	.	Parent=comp134738_c0_seq1.mrna1;Target=comp134738_c0_seq1 546 550 +
Chr1	stalkie_big_nohaplotig	exon	130831915	130832169	99	-	.	Parent=comp134738_c0_seq1.mrna1;Target=comp134738_c0_seq1 291 545 +
Chr1	stalkie_big_nohaplotig	exon	130832259	130832548	99	-	.	Parent=comp134738_c0_seq1.mrna1;Target=comp134738_c0_seq1 1 290 +
Chr1	stalkie_big_nohaplotig	CDS	130832054	130832169	.	-	2	Parent=comp134738_c0_seq1.mrna1;Target=comp134738_c0_seq1 291 406 +
Chr1	stalkie_big_nohaplotig	CDS	130832259	130832358	.	-	0	Parent=comp134738_c0_seq1.mrna1;Target=comp134738_c0_seq1 191 290 +
Chr1	stalkie_big_nohaplotig	mRNA	129045868	129050360	.	-	.	ID=FBgn0022786.1.mrna1;geneID=FBgn0022786.1.path1;Name=FBgn0022786.1;Dir=sensecoverage=100.0;identity=99.6;matches=2869;mismatches=11;indels=0;unknowns=0;locus=RLOC_00011092
Chr1	stalkie_big_nohaplotig	exon	129045868	129046053	100	-	.	Parent=FBgn0022786.1.mrna1;Target=FBgn0022786.1 2695 2880 +
Chr1	stalkie_big_nohaplotig	exon	129047122	129047353	99	-	.	Parent=FBgn0022786.1.mrna1;Target=FBgn0022786.1 2463 2694 +
Chr1	stalkie_big_nohaplotig	exon	129047421	129047785	99	-	.	Parent=FBgn0022786.1.mrna1;Target=FBgn0022786.1 2098 2462 +
Chr1	stalkie_big_nohaplotig	exon	129047852	129047997	100	-	.	Parent=FBgn0022786.1.mrna1;Target=FBgn0022786.1 1952 2097 +
Chr1	stalkie_big_nohaplotig	exon	129048090	129048421	99	-	.	Parent=FBgn0022786.1.mrna1;Target=FBgn0022786.1 1620 1951 +
Chr1	stalkie_big_nohaplotig	exon	129048483	129048641	100	-	.	Parent=FBgn0022786.1.mrna1;Target=FBgn0022786.1 1461 1619 +
Chr1	stalkie_big_nohaplotig	exon	129048706	129049043	99	-	.	Parent=FBgn0022786.1.mrna1;Target=FBgn0022786.1 1123 1460 +
Chr1	stalkie_big_nohaplotig	exon	129049101	129049895	99	-	.	Parent=FBgn0022786.1.mrna1;Target=FBgn0022786.1 328 1122 +
Chr1	stalkie_big_nohaplotig	exon	129049958	129050223	99	-	.	Parent=FBgn0022786.1.mrna1;Target=FBgn0022786.1 62 327 +
Chr1	stalkie_big_nohaplotig	exon	129050300	129050360	100	-	.	Parent=FBgn0022786.1.mrna1;Target=FBgn0022786.1 1 61 +
Chr1	stalkie_big_nohaplotig	CDS	129045868	129046053	.	-	0	Parent=FBgn0022786.1.mrna1;Target=FBgn0022786.1 2695 2880 +
Chr1	stalkie_big_nohaplotig	CDS	129047122	129047353	.	-	1	Parent=FBgn0022786.1.mrna1;Target=FBgn0022786.1 2463 2694 +
Chr1	stalkie_big_nohaplotig	CDS	129047421	129047785	.	-	0	Parent=FBgn0022786.1.mrna1;Target=FBgn0022786.1 2098 2462 +
Chr1	stalkie_big_nohaplotig	CDS	129047852	129047997	.	-	2	Parent=FBgn0022786.1.mrna1;Target=FBgn0022786.1 1952 2097 +
Chr1	stalkie_big_nohaplotig	CDS	129048090	129048421	.	-	1	Parent=FBgn0022786.1.mrna1;Target=FBgn0022786.1 1620 1951 +
Chr1	stalkie_big_nohaplotig	CDS	129048483	129048641	.	-	1	Parent=FBgn0022786.1.mrna1;Target=FBgn0022786.1 1461 1619 +
Chr1	stalkie_big_nohaplotig	CDS	129048706	129049043	.	-	0	Parent=FBgn0022786.1.mrna1;Target=FBgn0022786.1 1123 1460 +
Chr1	stalkie_big_nohaplotig	CDS	129049101	129049895	.	-	0	Parent=FBgn0022786.1.mrna1;Target=FBgn0022786.1 328 1122 +
Chr1	stalkie_big_nohaplotig	CDS	129049958	129050223	.	-	2	Parent=FBgn0022786.1.mrna1;Target=FBgn0022786.1 62 327 +
Chr1	stalkie_big_nohaplotig	CDS	129050300	129050360	.	-	0	Parent=FBgn0022786.1.mrna1;Target=FBgn0022786.1 1 61 +
Chr1	gffcl	locus	129040482	129041635	.	-	.	ID=RLOC_00011094;geneIDs=FBgn0029957.1.path1;transcripts=FBgn0029957.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129040482	129041635	.	-	.	ID=FBgn0029957.1.mrna1;geneID=FBgn0029957.1.path1;Name=FBgn0029957.1;Dir=sensecoverage=100.0;identity=99.4;matches=1094;mismatches=7;indels=0;unknowns=0;locus=RLOC_00011094
Chr1	stalkie_big_nohaplotig	exon	129040482	129041395	99	-	.	Parent=FBgn0029957.1.mrna1;Target=FBgn0029957.1 188 1101 +
Chr1	stalkie_big_nohaplotig	exon	129041449	129041635	97	-	.	Parent=FBgn0029957.1.mrna1;Target=FBgn0029957.1 1 187 +
Chr1	stalkie_big_nohaplotig	CDS	129040482	129041395	.	-	2	Parent=FBgn0029957.1.mrna1;Target=FBgn0029957.1 188 1101 +
Chr1	stalkie_big_nohaplotig	CDS	129041449	129041635	.	-	0	Parent=FBgn0029957.1.mrna1;Target=FBgn0029957.1 1 187 +
Chr1	gffcl	locus	129043232	129045393	.	+	.	ID=RLOC_00011095;geneIDs=FBgn0027553.1.path1;transcripts=FBgn0027553.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129043232	129045393	.	+	.	ID=FBgn0027553.1.mrna1;geneID=FBgn0027553.1.path1;Name=FBgn0027553.1;Dir=sensecoverage=100.0;identity=99.5;matches=1765;mismatches=8;indels=0;unknowns=0;locus=RLOC_00011095
Chr1	stalkie_big_nohaplotig	exon	129043232	129043366	100	+	.	Parent=FBgn0027553.1.mrna1;Target=FBgn0027553.1 1 135 +
Chr1	stalkie_big_nohaplotig	exon	129043516	129043614	98	+	.	Parent=FBgn0027553.1.mrna1;Target=FBgn0027553.1 136 234 +
Chr1	stalkie_big_nohaplotig	exon	129043674	129044354	99	+	.	Parent=FBgn0027553.1.mrna1;Target=FBgn0027553.1 235 915 +
Chr1	stalkie_big_nohaplotig	exon	129044412	129044930	99	+	.	Parent=FBgn0027553.1.mrna1;Target=FBgn0027553.1 916 1434 +
Chr1	stalkie_big_nohaplotig	exon	129044989	129045116	100	+	.	Parent=FBgn0027553.1.mrna1;Target=FBgn0027553.1 1435 1562 +
Chr1	stalkie_big_nohaplotig	exon	129045183	129045393	99	+	.	Parent=FBgn0027553.1.mrna1;Target=FBgn0027553.1 1563 1773 +
Chr1	stalkie_big_nohaplotig	CDS	129043232	129043366	.	+	0	Parent=FBgn0027553.1.mrna1;Target=FBgn0027553.1 1 135 +
Chr1	stalkie_big_nohaplotig	CDS	129043516	129043614	.	+	0	Parent=FBgn0027553.1.mrna1;Target=FBgn0027553.1 136 234 +
Chr1	stalkie_big_nohaplotig	CDS	129043674	129044354	.	+	0	Parent=FBgn0027553.1.mrna1;Target=FBgn0027553.1 235 915 +
Chr1	stalkie_big_nohaplotig	CDS	129044412	129044930	.	+	0	Parent=FBgn0027553.1.mrna1;Target=FBgn0027553.1 916 1434 +
Chr1	stalkie_big_nohaplotig	CDS	129044989	129045116	.	+	0	Parent=FBgn0027553.1.mrna1;Target=FBgn0027553.1 1435 1562 +
Chr1	stalkie_big_nohaplotig	CDS	129045183	129045393	.	+	1	Parent=FBgn0027553.1.mrna1;Target=FBgn0027553.1 1563 1773 +
Chr1	gffcl	locus	129085234	129426910	.	-	.	ID=RLOC_00011097;geneIDs=FBgn0261549.1.path1,comp143894_c0_seq1.path1;transcripts=FBgn0261549.1.mrna1,comp143894_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129085234	129426910	.	-	.	ID=FBgn0261549.1.mrna1;geneID=FBgn0261549.1.path1;Name=FBgn0261549.1;Dir=sensecoverage=66.5;identity=99.9;matches=1907;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011097
Chr1	stalkie_big_nohaplotig	exon	129085234	129085527	100	-	.	Parent=FBgn0261549.1.mrna1;Target=FBgn0261549.1 1638 1931 +
Chr1	stalkie_big_nohaplotig	exon	129085649	129086058	99	-	.	Parent=FBgn0261549.1.mrna1;Target=FBgn0261549.1 1228 1637 +
Chr1	stalkie_big_nohaplotig	exon	129086152	129086332	100	-	.	Parent=FBgn0261549.1.mrna1;Target=FBgn0261549.1 1047 1227 +
Chr1	stalkie_big_nohaplotig	exon	129086444	129086777	100	-	.	Parent=FBgn0261549.1.mrna1;Target=FBgn0261549.1 713 1046 +
Chr1	stalkie_big_nohaplotig	exon	129092153	129092279	100	-	.	Parent=FBgn0261549.1.mrna1;Target=FBgn0261549.1 586 712 +
Chr1	stalkie_big_nohaplotig	exon	129096978	129097181	100	-	.	Parent=FBgn0261549.1.mrna1;Target=FBgn0261549.1 382 585 +
Chr1	stalkie_big_nohaplotig	exon	129102352	129102490	100	-	.	Parent=FBgn0261549.1.mrna1;Target=FBgn0261549.1 243 381 +
Chr1	stalkie_big_nohaplotig	exon	129117130	129117133	100	-	.	Parent=FBgn0261549.1.mrna1;Target=FBgn0261549.1 239 242 +
Chr1	stalkie_big_nohaplotig	exon	129426603	129426779	99	-	.	Parent=FBgn0261549.1.mrna1;Target=FBgn0261549.1 40 216 +
Chr1	stalkie_big_nohaplotig	exon	129426872	129426910	100	-	.	Parent=FBgn0261549.1.mrna1;Target=FBgn0261549.1 1 39 +
Chr1	stalkie_big_nohaplotig	CDS	129085236	129085527	.	-	1	Parent=FBgn0261549.1.mrna1;Target=FBgn0261549.1 1638 1929 +
Chr1	stalkie_big_nohaplotig	CDS	129085649	129086058	.	-	0	Parent=FBgn0261549.1.mrna1;Target=FBgn0261549.1 1228 1637 +
Chr1	stalkie_big_nohaplotig	CDS	129086152	129086332	.	-	1	Parent=FBgn0261549.1.mrna1;Target=FBgn0261549.1 1047 1227 +
Chr1	stalkie_big_nohaplotig	CDS	129086444	129086777	.	-	2	Parent=FBgn0261549.1.mrna1;Target=FBgn0261549.1 713 1046 +
Chr1	stalkie_big_nohaplotig	CDS	129092153	129092279	.	-	0	Parent=FBgn0261549.1.mrna1;Target=FBgn0261549.1 586 712 +
Chr1	stalkie_big_nohaplotig	CDS	129096978	129097166	.	-	0	Parent=FBgn0261549.1.mrna1;Target=FBgn0261549.1 397 585 +
Chr1	stalkie_big_nohaplotig	mRNA	129102467	129111924	.	-	.	ID=comp143894_c0_seq1.mrna1;geneID=comp143894_c0_seq1.path1;Name=comp143894_c0_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=405;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011097
Chr1	stalkie_big_nohaplotig	exon	129102467	129102490	100	-	.	Parent=comp143894_c0_seq1.mrna1;Target=comp143894_c0_seq1 1 24 -
Chr1	stalkie_big_nohaplotig	exon	129111541	129111924	99	-	.	Parent=comp143894_c0_seq1.mrna1;Target=comp143894_c0_seq1 25 408 -
Chr1	stalkie_big_nohaplotig	CDS	129102469	129102490	.	-	1	Parent=comp143894_c0_seq1.mrna1;Target=comp143894_c0_seq1 3 24 .
Chr1	stalkie_big_nohaplotig	CDS	129111541	129111923	.	-	0	Parent=comp143894_c0_seq1.mrna1;Target=comp143894_c0_seq1 25 407 .
Chr1	gffcl	locus	129090873	129091718	.	+	.	ID=RLOC_00011098;geneIDs=comp135806_c0_seq1.path1;transcripts=comp135806_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129090873	129091718	.	+	.	ID=comp135806_c0_seq1.mrna1;geneID=comp135806_c0_seq1.path1;Name=comp135806_c0_seq1;Dir=indeterminatecoverage=96.5;identity=99.9;matches=846;mismatches=0;indels=1;unknowns=0;Target=comp135806_c0_seq1 848 2 .;CDS_Target=comp135806_c0_seq1 611 372 .;locus=RLOC_00011098
Chr1	stalkie_big_nohaplotig	exon	129090873	129091718	99	+	.	Parent=comp135806_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129091243	129091482	.	+	0	Parent=comp135806_c0_seq1.mrna1
Chr1	gffcl	locus	129112363	129112845	.	-	.	ID=RLOC_00011099;geneIDs=comp151578_c0_seq1.path1;transcripts=comp151578_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129112363	129112845	.	-	.	ID=comp151578_c0_seq1.mrna1;geneID=comp151578_c0_seq1.path1;Name=comp151578_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=482;mismatches=1;indels=0;unknowns=0;Target=comp151578_c0_seq1 483 1 .;CDS_Target=comp151578_c0_seq1 76 2 .;locus=RLOC_00011099
Chr1	stalkie_big_nohaplotig	exon	129112363	129112845	99	-	.	Parent=comp151578_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129112770	129112844	.	-	0	Parent=comp151578_c0_seq1.mrna1
Chr1	gffcl	locus	129266823	129267678	.	+	.	ID=RLOC_00011101;geneIDs=FBgn0030073.1.path2;transcripts=FBgn0030073.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	129266823	129267678	.	+	.	ID=FBgn0030073.1.mrna2;geneID=FBgn0030073.1.path2;Name=FBgn0030073.1;Dir=sensecoverage=100.0;identity=99.3;matches=754;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011101
Chr1	stalkie_big_nohaplotig	exon	129266823	129267407	99	+	.	Parent=FBgn0030073.1.mrna2;Target=FBgn0030073.1 1 585 +
Chr1	stalkie_big_nohaplotig	exon	129267505	129267678	99	+	.	Parent=FBgn0030073.1.mrna2;Target=FBgn0030073.1 586 759 +
Chr1	stalkie_big_nohaplotig	CDS	129266823	129267407	.	+	0	Parent=FBgn0030073.1.mrna2;Target=FBgn0030073.1 1 585 +
Chr1	stalkie_big_nohaplotig	CDS	129267505	129267678	.	+	0	Parent=FBgn0030073.1.mrna2;Target=FBgn0030073.1 586 759 +
Chr1	gffcl	locus	129385111	129385541	.	+	.	ID=RLOC_00011102;geneIDs=FBgn0011586.2.path1;transcripts=FBgn0011586.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129385111	129385541	.	+	.	ID=FBgn0011586.2.mrna1;geneID=FBgn0011586.2.path1;Name=FBgn0011586.2;Dir=sensecoverage=100.0;identity=99.1;matches=339;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011102
Chr1	stalkie_big_nohaplotig	exon	129385111	129385424	99	+	.	Parent=FBgn0011586.2.mrna1;Target=FBgn0011586.2 1 314 +
Chr1	stalkie_big_nohaplotig	exon	129385514	129385541	100	+	.	Parent=FBgn0011586.2.mrna1;Target=FBgn0011586.2 315 342 +
Chr1	stalkie_big_nohaplotig	CDS	129385111	129385424	.	+	0	Parent=FBgn0011586.2.mrna1;Target=FBgn0011586.2 1 314 +
Chr1	stalkie_big_nohaplotig	CDS	129385514	129385541	.	+	1	Parent=FBgn0011586.2.mrna1;Target=FBgn0011586.2 315 342 +
Chr1	gffcl	locus	129408577	129430017	.	+	.	ID=RLOC_00011103;geneIDs=FBgn0011586.4.path1;transcripts=FBgn0011586.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129408577	129430017	.	+	.	ID=FBgn0011586.4.mrna1;geneID=FBgn0011586.4.path1;Name=FBgn0011586.4;Dir=indeterminatecoverage=88.7;identity=100.0;matches=330;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011103
Chr1	stalkie_big_nohaplotig	exon	129408577	129408585	100	+	.	Parent=FBgn0011586.4.mrna1;Target=FBgn0011586.4 51 43 .
Chr1	stalkie_big_nohaplotig	exon	129416466	129416470	100	+	.	Parent=FBgn0011586.4.mrna1;Target=FBgn0011586.4 56 52 .
Chr1	stalkie_big_nohaplotig	exon	129424352	129424357	100	+	.	Parent=FBgn0011586.4.mrna1;Target=FBgn0011586.4 62 57 .
Chr1	stalkie_big_nohaplotig	exon	129429708	129430017	100	+	.	Parent=FBgn0011586.4.mrna1;Target=FBgn0011586.4 372 63 .
Chr1	stalkie_big_nohaplotig	CDS	129408577	129408585	.	+	0	Parent=FBgn0011586.4.mrna1;Target=FBgn0011586.4 51 43 .
Chr1	stalkie_big_nohaplotig	CDS	129416466	129416470	.	+	0	Parent=FBgn0011586.4.mrna1;Target=FBgn0011586.4 56 52 .
Chr1	stalkie_big_nohaplotig	CDS	129424352	129424357	.	+	1	Parent=FBgn0011586.4.mrna1;Target=FBgn0011586.4 62 57 .
Chr1	stalkie_big_nohaplotig	CDS	129429708	129430017	.	+	1	Parent=FBgn0011586.4.mrna1;Target=FBgn0011586.4 372 63 .
Chr1	gffcl	locus	129418997	129419754	.	-	.	ID=RLOC_00011104;geneIDs=comp699271_c0_seq1.path1;transcripts=comp699271_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129418997	129419754	.	-	.	ID=comp699271_c0_seq1.mrna1;geneID=comp699271_c0_seq1.path1;Name=comp699271_c0_seq1;Dir=indeterminatecoverage=99.9;identity=89.6;matches=706;mismatches=49;indels=33;unknowns=0;Target=comp699271_c0_seq1 785 1 .;CDS_Target=comp699271_c0_seq1 448 389 .;locus=RLOC_00011104
Chr1	stalkie_big_nohaplotig	exon	129418997	129419754	89	-	.	Parent=comp699271_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129419319	129419371	.	-	0	Parent=comp699271_c0_seq1.mrna1
Chr1	gffcl	locus	129437698	129444411	.	-	.	ID=RLOC_00011105;geneIDs=FBgn0030067.1.path1;transcripts=FBgn0030067.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129437698	129444411	.	-	.	ID=FBgn0030067.1.mrna1;geneID=FBgn0030067.1.path1;Name=FBgn0030067.1;Dir=sensecoverage=100.0;identity=99.7;matches=1017;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011105
Chr1	stalkie_big_nohaplotig	exon	129437698	129437883	100	-	.	Parent=FBgn0030067.1.mrna1;Target=FBgn0030067.1 835 1020 +
Chr1	stalkie_big_nohaplotig	exon	129443449	129444214	99	-	.	Parent=FBgn0030067.1.mrna1;Target=FBgn0030067.1 69 834 +
Chr1	stalkie_big_nohaplotig	exon	129444279	129444325	100	-	.	Parent=FBgn0030067.1.mrna1;Target=FBgn0030067.1 22 68 +
Chr1	stalkie_big_nohaplotig	exon	129444391	129444411	100	-	.	Parent=FBgn0030067.1.mrna1;Target=FBgn0030067.1 1 21 +
Chr1	stalkie_big_nohaplotig	CDS	129437698	129437883	.	-	0	Parent=FBgn0030067.1.mrna1;Target=FBgn0030067.1 835 1020 +
Chr1	stalkie_big_nohaplotig	CDS	129443449	129444214	.	-	1	Parent=FBgn0030067.1.mrna1;Target=FBgn0030067.1 69 834 +
Chr1	stalkie_big_nohaplotig	CDS	129444279	129444325	.	-	0	Parent=FBgn0030067.1.mrna1;Target=FBgn0030067.1 22 68 +
Chr1	stalkie_big_nohaplotig	CDS	129444391	129444411	.	-	0	Parent=FBgn0030067.1.mrna1;Target=FBgn0030067.1 1 21 +
Chr1	gffcl	locus	129447382	129452418	.	+	.	ID=RLOC_00011106;geneIDs=FBgn0034447.1.path1;transcripts=FBgn0034447.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129447382	129452418	.	+	.	ID=FBgn0034447.1.mrna1;geneID=FBgn0034447.1.path1;Name=FBgn0034447.1;Dir=sensecoverage=100.0;identity=99.4;matches=2353;mismatches=14;indels=0;unknowns=0;locus=RLOC_00011106
Chr1	stalkie_big_nohaplotig	exon	129447382	129447488	100	+	.	Parent=FBgn0034447.1.mrna1;Target=FBgn0034447.1 1 107 +
Chr1	stalkie_big_nohaplotig	exon	129447646	129447984	99	+	.	Parent=FBgn0034447.1.mrna1;Target=FBgn0034447.1 108 446 +
Chr1	stalkie_big_nohaplotig	exon	129450436	129451084	98	+	.	Parent=FBgn0034447.1.mrna1;Target=FBgn0034447.1 447 1095 +
Chr1	stalkie_big_nohaplotig	exon	129451147	129452418	99	+	.	Parent=FBgn0034447.1.mrna1;Target=FBgn0034447.1 1096 2367 +
Chr1	stalkie_big_nohaplotig	CDS	129447382	129447488	.	+	0	Parent=FBgn0034447.1.mrna1;Target=FBgn0034447.1 1 107 +
Chr1	stalkie_big_nohaplotig	CDS	129447646	129447984	.	+	1	Parent=FBgn0034447.1.mrna1;Target=FBgn0034447.1 108 446 +
Chr1	stalkie_big_nohaplotig	CDS	129450436	129451084	.	+	1	Parent=FBgn0034447.1.mrna1;Target=FBgn0034447.1 447 1095 +
Chr1	stalkie_big_nohaplotig	CDS	129451147	129452418	.	+	0	Parent=FBgn0034447.1.mrna1;Target=FBgn0034447.1 1096 2367 +
Chr1	gffcl	locus	129454635	129455405	.	+	.	ID=RLOC_00011107;geneIDs=FBgn0030066.1.path1;transcripts=FBgn0030066.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129454635	129455405	.	+	.	ID=FBgn0030066.1.mrna1;geneID=FBgn0030066.1.path1;Name=FBgn0030066.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=769;mismatches=2;indels=0;unknowns=0;Target=FBgn0030066.1 771 1 .;locus=RLOC_00011107
Chr1	stalkie_big_nohaplotig	exon	129454635	129455405	99	+	.	Parent=FBgn0030066.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129454635	129455405	.	+	0	Parent=FBgn0030066.1.mrna1
Chr1	gffcl	locus	129459141	129465909	.	-	.	ID=RLOC_00011108;geneIDs=FBgn0011661.1.path1;transcripts=FBgn0011661.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129459141	129465909	.	-	.	ID=FBgn0011661.1.mrna1;geneID=FBgn0011661.1.path1;Name=FBgn0011661.1;Dir=sensecoverage=97.6;identity=99.9;matches=1714;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011108
Chr1	stalkie_big_nohaplotig	exon	129459141	129459302	100	-	.	Parent=FBgn0011661.1.mrna1;Target=FBgn0011661.1 1597 1758 +
Chr1	stalkie_big_nohaplotig	exon	129459371	129459589	100	-	.	Parent=FBgn0011661.1.mrna1;Target=FBgn0011661.1 1378 1596 +
Chr1	stalkie_big_nohaplotig	exon	129460592	129460979	100	-	.	Parent=FBgn0011661.1.mrna1;Target=FBgn0011661.1 990 1377 +
Chr1	stalkie_big_nohaplotig	exon	129461046	129461812	99	-	.	Parent=FBgn0011661.1.mrna1;Target=FBgn0011661.1 223 989 +
Chr1	stalkie_big_nohaplotig	exon	129465730	129465909	100	-	.	Parent=FBgn0011661.1.mrna1;Target=FBgn0011661.1 43 222 +
Chr1	stalkie_big_nohaplotig	CDS	129459141	129459302	.	-	0	Parent=FBgn0011661.1.mrna1;Target=FBgn0011661.1 1597 1758 +
Chr1	stalkie_big_nohaplotig	CDS	129459371	129459589	.	-	0	Parent=FBgn0011661.1.mrna1;Target=FBgn0011661.1 1378 1596 +
Chr1	stalkie_big_nohaplotig	CDS	129460592	129460979	.	-	1	Parent=FBgn0011661.1.mrna1;Target=FBgn0011661.1 990 1377 +
Chr1	stalkie_big_nohaplotig	CDS	129461046	129461812	.	-	0	Parent=FBgn0011661.1.mrna1;Target=FBgn0011661.1 223 989 +
Chr1	stalkie_big_nohaplotig	CDS	129465730	129465909	.	-	0	Parent=FBgn0011661.1.mrna1;Target=FBgn0011661.1 43 222 +
Chr1	gffcl	locus	129514120	129514460	.	-	.	ID=RLOC_00011109;geneIDs=comp127578_c0_seq1.path1;transcripts=comp127578_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129514120	129514460	.	-	.	ID=comp127578_c0_seq1.mrna1;geneID=comp127578_c0_seq1.path1;Name=comp127578_c0_seq1;Dir=indeterminatecoverage=93.9;identity=99.7;matches=340;mismatches=1;indels=0;unknowns=0;Target=comp127578_c0_seq1 341 1 .;CDS_Target=comp127578_c0_seq1 81 1 .;locus=RLOC_00011109
Chr1	stalkie_big_nohaplotig	exon	129514120	129514460	99	-	.	Parent=comp127578_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129514380	129514460	.	-	0	Parent=comp127578_c0_seq1.mrna1
Chr1	gffcl	locus	129520698	129521164	.	+	.	ID=RLOC_00011110;geneIDs=comp146435_c0_seq1.path1;transcripts=comp146435_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129520698	129521164	.	+	.	ID=comp146435_c0_seq1.mrna1;geneID=comp146435_c0_seq1.path1;Name=comp146435_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=465;mismatches=1;indels=2;unknowns=0;Target=comp146435_c0_seq1 467 1 .;CDS_Target=comp146435_c0_seq1 23 3 .;locus=RLOC_00011110
Chr1	stalkie_big_nohaplotig	exon	129520698	129521164	99	+	.	Parent=comp146435_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129520700	129520719	.	+	0	Parent=comp146435_c0_seq1.mrna1
Chr1	gffcl	locus	129529389	129531303	.	-	.	ID=RLOC_00011111;geneIDs=FBgn0030093.1.path1;transcripts=FBgn0030093.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129529389	129531303	.	-	.	ID=FBgn0030093.1.mrna1;geneID=FBgn0030093.1.path1;Name=FBgn0030093.1;Dir=sensecoverage=100.0;identity=100.0;matches=1848;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011111
Chr1	stalkie_big_nohaplotig	exon	129529389	129530140	100	-	.	Parent=FBgn0030093.1.mrna1;Target=FBgn0030093.1 1097 1848 +
Chr1	stalkie_big_nohaplotig	exon	129530208	129531303	100	-	.	Parent=FBgn0030093.1.mrna1;Target=FBgn0030093.1 1 1096 +
Chr1	stalkie_big_nohaplotig	CDS	129529389	129530140	.	-	2	Parent=FBgn0030093.1.mrna1;Target=FBgn0030093.1 1097 1848 +
Chr1	stalkie_big_nohaplotig	CDS	129530208	129531303	.	-	0	Parent=FBgn0030093.1.mrna1;Target=FBgn0030093.1 1 1096 +
Chr1	gffcl	locus	129531237	129532083	.	+	.	ID=RLOC_00011112;geneIDs=FBgn0030092.1.path1;transcripts=FBgn0030092.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129531237	129532083	.	+	.	ID=FBgn0030092.1.mrna1;geneID=FBgn0030092.1.path1;Name=FBgn0030092.1;Dir=sensecoverage=100.0;identity=99.7;matches=793;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011112
Chr1	stalkie_big_nohaplotig	exon	129531237	129531773	100	+	.	Parent=FBgn0030092.1.mrna1;Target=FBgn0030092.1 1 537 +
Chr1	stalkie_big_nohaplotig	exon	129531826	129532083	99	+	.	Parent=FBgn0030092.1.mrna1;Target=FBgn0030092.1 538 795 +
Chr1	stalkie_big_nohaplotig	CDS	129531237	129531773	.	+	0	Parent=FBgn0030092.1.mrna1;Target=FBgn0030092.1 1 537 +
Chr1	stalkie_big_nohaplotig	CDS	129531826	129532083	.	+	0	Parent=FBgn0030092.1.mrna1;Target=FBgn0030092.1 538 795 +
Chr1	gffcl	locus	129537809	129541208	.	+	.	ID=RLOC_00011113;geneIDs=FBgn0030328.1.path1;transcripts=FBgn0030328.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129537809	129541208	.	+	.	ID=FBgn0030328.1.mrna1;geneID=FBgn0030328.1.path1;Name=FBgn0030328.1;Dir=sensecoverage=100.0;identity=99.6;matches=1518;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011113
Chr1	stalkie_big_nohaplotig	exon	129537809	129538712	99	+	.	Parent=FBgn0030328.1.mrna1;Target=FBgn0030328.1 1 904 +
Chr1	stalkie_big_nohaplotig	exon	129540589	129541208	99	+	.	Parent=FBgn0030328.1.mrna1;Target=FBgn0030328.1 905 1524 +
Chr1	stalkie_big_nohaplotig	CDS	129537809	129538712	.	+	0	Parent=FBgn0030328.1.mrna1;Target=FBgn0030328.1 1 904 +
Chr1	stalkie_big_nohaplotig	CDS	129540589	129541208	.	+	2	Parent=FBgn0030328.1.mrna1;Target=FBgn0030328.1 905 1524 +
Chr1	gffcl	locus	129556760	129560041	.	+	.	ID=RLOC_00011114;geneIDs=FBgn0030327.1.path1;transcripts=FBgn0030327.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129556760	129560041	.	+	.	ID=FBgn0030327.1.mrna1;geneID=FBgn0030327.1.path1;Name=FBgn0030327.1;Dir=sensecoverage=100.0;identity=99.6;matches=1371;mismatches=5;indels=1;unknowns=0;Target=FBgn0030327.1 3 86 +;locus=RLOC_00011114
Chr1	stalkie_big_nohaplotig	exon	129556760	129557073	99	+	.	Parent=FBgn0030327.1.mrna1;Target=FBgn0030327.1 1 315 +
Chr1	stalkie_big_nohaplotig	exon	129557141	129557565	99	+	.	Parent=FBgn0030327.1.mrna1;Target=FBgn0030327.1 316 740 +
Chr1	stalkie_big_nohaplotig	exon	129559405	129560041	99	+	.	Parent=FBgn0030327.1.mrna1;Target=FBgn0030327.1 741 1377 +
Chr1	stalkie_big_nohaplotig	CDS	129556762	129556844	.	+	0	Parent=FBgn0030327.1.mrna1
Chr1	gffcl	locus	129560221	129560787	.	-	.	ID=RLOC_00011115;geneIDs=comp156291_c0_seq1.path1;transcripts=comp156291_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129560221	129560787	.	-	.	ID=comp156291_c0_seq1.mrna1;geneID=comp156291_c0_seq1.path1;Name=comp156291_c0_seq1;Dir=indeterminatecoverage=95.8;identity=99.1;matches=563;mismatches=4;indels=1;unknowns=0;Target=comp156291_c0_seq1 587 20 .;CDS_Target=comp156291_c0_seq1 59 21 .;locus=RLOC_00011115
Chr1	stalkie_big_nohaplotig	exon	129560221	129560787	99	-	.	Parent=comp156291_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129560748	129560786	.	-	0	Parent=comp156291_c0_seq1.mrna1
Chr1	gffcl	locus	129561290	129562259	.	-	.	ID=RLOC_00011116;geneIDs=comp158351_c0_seq1.path1;transcripts=comp158351_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129561290	129562259	.	-	.	ID=comp158351_c0_seq1.mrna1;geneID=comp158351_c0_seq1.path1;Name=comp158351_c0_seq1;Dir=indeterminatecoverage=92.4;identity=95.4;matches=957;mismatches=11;indels=35;unknowns=0;Target=comp158351_c0_seq1 1083 83 .;CDS_Target=comp158351_c0_seq1 641 456 .;locus=RLOC_00011116
Chr1	stalkie_big_nohaplotig	exon	129561290	129562259	95	-	.	Parent=comp158351_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129561732	129561887	.	-	0	Parent=comp158351_c0_seq1.mrna1
Chr1	gffcl	locus	129565434	129565829	.	+	.	ID=RLOC_00011118;geneIDs=comp150589_c0_seq1.path1;transcripts=comp150589_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129565434	129565829	.	+	.	ID=comp150589_c0_seq1.mrna1;geneID=comp150589_c0_seq1.path1;Name=comp150589_c0_seq1;Dir=indeterminatecoverage=96.7;identity=94.2;matches=388;mismatches=8;indels=16;unknowns=0;Target=comp150589_c0_seq1 426 15 .;CDS_Target=comp150589_c0_seq1 208 131 .;locus=RLOC_00011118
Chr1	stalkie_big_nohaplotig	exon	129565434	129565829	94	+	.	Parent=comp150589_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129565550	129565627	.	+	0	Parent=comp150589_c0_seq1.mrna1
Chr1	gffcl	locus	129568222	129569509	.	-	.	ID=RLOC_00011119;geneIDs=comp161719_c0_seq1.path1;transcripts=comp161719_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129568222	129569509	.	-	.	ID=comp161719_c0_seq1.mrna1;geneID=comp161719_c0_seq1.path1;Name=comp161719_c0_seq1;Dir=indeterminatecoverage=99.9;identity=91.8;matches=1228;mismatches=36;indels=74;unknowns=0;Target=comp161719_c0_seq1 1315 2 .;CDS_Target=comp161719_c0_seq1 422 408 .;locus=RLOC_00011119
Chr1	stalkie_big_nohaplotig	exon	129568222	129569509	91	-	.	Parent=comp161719_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129569107	129569121	.	-	0	Parent=comp161719_c0_seq1.mrna1
Chr1	gffcl	locus	129603890	129605171	.	-	.	ID=RLOC_00011120;geneIDs=FBgn0011710.1.path1;transcripts=FBgn0011710.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129603890	129605171	.	-	.	ID=FBgn0011710.1.mrna1;geneID=FBgn0011710.1.path1;Name=FBgn0011710.1;Dir=sensecoverage=96.5;identity=99.7;matches=1068;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011120
Chr1	stalkie_big_nohaplotig	exon	129603890	129604142	100	-	.	Parent=FBgn0011710.1.mrna1;Target=FBgn0011710.1 858 1110 +
Chr1	stalkie_big_nohaplotig	exon	129604212	129604577	99	-	.	Parent=FBgn0011710.1.mrna1;Target=FBgn0011710.1 492 857 +
Chr1	stalkie_big_nohaplotig	exon	129604638	129604896	99	-	.	Parent=FBgn0011710.1.mrna1;Target=FBgn0011710.1 233 491 +
Chr1	stalkie_big_nohaplotig	exon	129604979	129605171	100	-	.	Parent=FBgn0011710.1.mrna1;Target=FBgn0011710.1 40 232 +
Chr1	stalkie_big_nohaplotig	CDS	129603890	129604142	.	-	1	Parent=FBgn0011710.1.mrna1;Target=FBgn0011710.1 858 1110 +
Chr1	stalkie_big_nohaplotig	CDS	129604212	129604577	.	-	1	Parent=FBgn0011710.1.mrna1;Target=FBgn0011710.1 492 857 +
Chr1	stalkie_big_nohaplotig	CDS	129604638	129604896	.	-	2	Parent=FBgn0011710.1.mrna1;Target=FBgn0011710.1 233 491 +
Chr1	stalkie_big_nohaplotig	CDS	129604979	129605171	.	-	0	Parent=FBgn0011710.1.mrna1;Target=FBgn0011710.1 40 232 +
Chr1	gffcl	locus	129609892	129614154	.	+	.	ID=RLOC_00011121;geneIDs=FBgn0015663.1.path1;transcripts=FBgn0015663.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129609892	129614154	.	+	.	ID=FBgn0015663.1.mrna1;geneID=FBgn0015663.1.path1;Name=FBgn0015663.1;Dir=sensecoverage=100.0;identity=99.7;matches=1406;mismatches=3;indels=1;unknowns=0;locus=RLOC_00011121
Chr1	stalkie_big_nohaplotig	exon	129609892	129610559	99	+	.	Parent=FBgn0015663.1.mrna1;Target=FBgn0015663.1 1 668 +
Chr1	stalkie_big_nohaplotig	exon	129610621	129611063	100	+	.	Parent=FBgn0015663.1.mrna1;Target=FBgn0015663.1 669 1111 +
Chr1	stalkie_big_nohaplotig	exon	129613785	129614001	100	+	.	Parent=FBgn0015663.1.mrna1;Target=FBgn0015663.1 1112 1328 +
Chr1	stalkie_big_nohaplotig	exon	129614074	129614154	98	+	.	Parent=FBgn0015663.1.mrna1;Target=FBgn0015663.1 1329 1410 +
Chr1	stalkie_big_nohaplotig	CDS	129609892	129610559	.	+	0	Parent=FBgn0015663.1.mrna1;Target=FBgn0015663.1 1 668 +
Chr1	stalkie_big_nohaplotig	CDS	129610621	129611063	.	+	1	Parent=FBgn0015663.1.mrna1;Target=FBgn0015663.1 669 1111 +
Chr1	stalkie_big_nohaplotig	CDS	129613785	129614001	.	+	2	Parent=FBgn0015663.1.mrna1;Target=FBgn0015663.1 1112 1328 +
Chr1	stalkie_big_nohaplotig	CDS	129614074	129614154	.	+	1	Parent=FBgn0015663.1.mrna1;Target=FBgn0015663.1 1329 1410 +
Chr1	gffcl	locus	129614381	129614821	.	-	.	ID=RLOC_00011122;geneIDs=comp83693_c0_seq1.path1;transcripts=comp83693_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129614381	129614821	.	-	.	ID=comp83693_c0_seq1.mrna1;geneID=comp83693_c0_seq1.path1;Name=comp83693_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=437;mismatches=4;indels=0;unknowns=0;Target=comp83693_c0_seq1 441 1 .;CDS_Target=comp83693_c0_seq1 78 1 .;locus=RLOC_00011122
Chr1	stalkie_big_nohaplotig	exon	129614381	129614821	99	-	.	Parent=comp83693_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129614744	129614821	.	-	0	Parent=comp83693_c0_seq1.mrna1
Chr1	gffcl	locus	129626447	129627443	.	+	.	ID=RLOC_00011123;geneIDs=FBgn0029783.1.path1;transcripts=FBgn0029783.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129626447	129627443	.	+	.	ID=FBgn0029783.1.mrna1;geneID=FBgn0029783.1.path1;Name=FBgn0029783.1;Dir=sensecoverage=100.0;identity=98.9;matches=917;mismatches=10;indels=0;unknowns=0;locus=RLOC_00011123
Chr1	stalkie_big_nohaplotig	exon	129626447	129626630	99	+	.	Parent=FBgn0029783.1.mrna1;Target=FBgn0029783.1 1 184 +
Chr1	stalkie_big_nohaplotig	exon	129626701	129627443	98	+	.	Parent=FBgn0029783.1.mrna1;Target=FBgn0029783.1 185 927 +
Chr1	stalkie_big_nohaplotig	CDS	129626447	129626630	.	+	0	Parent=FBgn0029783.1.mrna1;Target=FBgn0029783.1 1 184 +
Chr1	stalkie_big_nohaplotig	CDS	129626701	129627443	.	+	2	Parent=FBgn0029783.1.mrna1;Target=FBgn0029783.1 185 927 +
Chr1	gffcl	locus	129628223	129630694	.	+	.	ID=RLOC_00011124;geneIDs=FBgn0029891.1.path1;transcripts=FBgn0029891.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129628223	129630694	.	+	.	ID=FBgn0029891.1.mrna1;geneID=FBgn0029891.1.path1;Name=FBgn0029891.1;Dir=sensecoverage=100.0;identity=99.8;matches=2167;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011124
Chr1	stalkie_big_nohaplotig	exon	129628223	129628417	100	+	.	Parent=FBgn0029891.1.mrna1;Target=FBgn0029891.1 1 195 +
Chr1	stalkie_big_nohaplotig	exon	129628485	129629261	99	+	.	Parent=FBgn0029891.1.mrna1;Target=FBgn0029891.1 196 972 +
Chr1	stalkie_big_nohaplotig	exon	129629441	129630442	99	+	.	Parent=FBgn0029891.1.mrna1;Target=FBgn0029891.1 973 1974 +
Chr1	stalkie_big_nohaplotig	exon	129630497	129630694	100	+	.	Parent=FBgn0029891.1.mrna1;Target=FBgn0029891.1 1975 2172 +
Chr1	stalkie_big_nohaplotig	CDS	129628223	129628417	.	+	0	Parent=FBgn0029891.1.mrna1;Target=FBgn0029891.1 1 195 +
Chr1	stalkie_big_nohaplotig	CDS	129628485	129629261	.	+	0	Parent=FBgn0029891.1.mrna1;Target=FBgn0029891.1 196 972 +
Chr1	stalkie_big_nohaplotig	CDS	129629441	129630442	.	+	0	Parent=FBgn0029891.1.mrna1;Target=FBgn0029891.1 973 1974 +
Chr1	stalkie_big_nohaplotig	CDS	129630497	129630694	.	+	0	Parent=FBgn0029891.1.mrna1;Target=FBgn0029891.1 1975 2172 +
Chr1	gffcl	locus	129632830	129633216	.	+	.	ID=RLOC_00011125;geneIDs=comp118608_c0_seq1.path1;transcripts=comp118608_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129632830	129633216	.	+	.	ID=comp118608_c0_seq1.mrna1;geneID=comp118608_c0_seq1.path1;Name=comp118608_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.6;matches=374;mismatches=13;indels=0;unknowns=0;Target=comp118608_c0_seq1 387 1 .;CDS_Target=comp118608_c0_seq1 87 1 .;locus=RLOC_00011125
Chr1	stalkie_big_nohaplotig	exon	129632830	129633216	96	+	.	Parent=comp118608_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129632830	129632916	.	+	0	Parent=comp118608_c0_seq1.mrna1
Chr1	gffcl	locus	129634899	129642535	.	-	.	ID=RLOC_00011126;geneIDs=FBgn0028336.1.path1;transcripts=FBgn0028336.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129634899	129642535	.	-	.	ID=FBgn0028336.1.mrna1;geneID=FBgn0028336.1.path1;Name=FBgn0028336.1;Dir=sensecoverage=100.0;identity=99.8;matches=1524;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011126
Chr1	stalkie_big_nohaplotig	exon	129634899	129635158	99	-	.	Parent=FBgn0028336.1.mrna1;Target=FBgn0028336.1 1268 1527 +
Chr1	stalkie_big_nohaplotig	exon	129635227	129636031	99	-	.	Parent=FBgn0028336.1.mrna1;Target=FBgn0028336.1 463 1267 +
Chr1	stalkie_big_nohaplotig	exon	129637081	129637281	99	-	.	Parent=FBgn0028336.1.mrna1;Target=FBgn0028336.1 262 462 +
Chr1	stalkie_big_nohaplotig	exon	129637352	129637483	100	-	.	Parent=FBgn0028336.1.mrna1;Target=FBgn0028336.1 130 261 +
Chr1	stalkie_big_nohaplotig	exon	129642407	129642535	100	-	.	Parent=FBgn0028336.1.mrna1;Target=FBgn0028336.1 1 129 +
Chr1	stalkie_big_nohaplotig	CDS	129634899	129635158	.	-	2	Parent=FBgn0028336.1.mrna1;Target=FBgn0028336.1 1268 1527 +
Chr1	stalkie_big_nohaplotig	CDS	129635227	129636031	.	-	0	Parent=FBgn0028336.1.mrna1;Target=FBgn0028336.1 463 1267 +
Chr1	stalkie_big_nohaplotig	CDS	129637081	129637281	.	-	0	Parent=FBgn0028336.1.mrna1;Target=FBgn0028336.1 262 462 +
Chr1	stalkie_big_nohaplotig	CDS	129637352	129637483	.	-	0	Parent=FBgn0028336.1.mrna1;Target=FBgn0028336.1 130 261 +
Chr1	stalkie_big_nohaplotig	CDS	129642407	129642535	.	-	0	Parent=FBgn0028336.1.mrna1;Target=FBgn0028336.1 1 129 +
Chr1	gffcl	locus	129646455	129648709	.	+	.	ID=RLOC_00011127;geneIDs=FBgn0000377.1.path1;transcripts=FBgn0000377.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129646455	129648709	.	+	.	ID=FBgn0000377.1.mrna1;geneID=FBgn0000377.1.path1;Name=FBgn0000377.1;Dir=sensecoverage=100.0;identity=99.4;matches=2133;mismatches=12;indels=0;unknowns=0;locus=RLOC_00011127
Chr1	stalkie_big_nohaplotig	exon	129646455	129646571	96	+	.	Parent=FBgn0000377.1.mrna1;Target=FBgn0000377.1 1 117 +
Chr1	stalkie_big_nohaplotig	exon	129646626	129647598	99	+	.	Parent=FBgn0000377.1.mrna1;Target=FBgn0000377.1 118 1090 +
Chr1	stalkie_big_nohaplotig	exon	129647655	129648709	99	+	.	Parent=FBgn0000377.1.mrna1;Target=FBgn0000377.1 1091 2145 +
Chr1	stalkie_big_nohaplotig	CDS	129646455	129646571	.	+	0	Parent=FBgn0000377.1.mrna1;Target=FBgn0000377.1 1 117 +
Chr1	stalkie_big_nohaplotig	CDS	129646626	129647598	.	+	0	Parent=FBgn0000377.1.mrna1;Target=FBgn0000377.1 118 1090 +
Chr1	stalkie_big_nohaplotig	CDS	129647655	129648709	.	+	2	Parent=FBgn0000377.1.mrna1;Target=FBgn0000377.1 1091 2145 +
Chr1	gffcl	locus	129648855	129649838	.	-	.	ID=RLOC_00011128;geneIDs=comp162674_c5_seq1.path1;transcripts=comp162674_c5_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129648855	129649838	.	-	.	ID=comp162674_c5_seq1.mrna1;geneID=comp162674_c5_seq1.path1;Name=comp162674_c5_seq1;Dir=indeterminatecoverage=82.5;identity=98.7;matches=972;mismatches=12;indels=1;unknowns=0;Target=comp162674_c5_seq1 1194 210 .;CDS_Target=comp162674_c5_seq1 1136 1068 .;locus=RLOC_00011128
Chr1	stalkie_big_nohaplotig	exon	129648855	129649838	98	-	.	Parent=comp162674_c5_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129648913	129648981	.	-	0	Parent=comp162674_c5_seq1.mrna1
Chr1	gffcl	locus	129649906	129650402	.	+	.	ID=RLOC_00011129;geneIDs=comp154901_c0_seq1.path1;transcripts=comp154901_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129649906	129650402	.	+	.	ID=comp154901_c0_seq1.mrna1;geneID=comp154901_c0_seq1.path1;Name=comp154901_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.5;matches=487;mismatches=9;indels=14;unknowns=0;Target=comp154901_c0_seq1 509 1 .;CDS_Target=comp154901_c0_seq1 68 3 .;locus=RLOC_00011129
Chr1	stalkie_big_nohaplotig	exon	129649906	129650402	95	+	.	Parent=comp154901_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129649908	129649960	.	+	0	Parent=comp154901_c0_seq1.mrna1
Chr1	gffcl	locus	129651093	129654844	.	-	.	ID=RLOC_00011130;geneIDs=FBgn0000810.1.path1;transcripts=FBgn0000810.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129651093	129654844	.	-	.	ID=FBgn0000810.1.mrna1;geneID=FBgn0000810.1.path1;Name=FBgn0000810.1;Dir=sensecoverage=100.0;identity=99.9;matches=1058;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011130
Chr1	stalkie_big_nohaplotig	exon	129651093	129651173	100	-	.	Parent=FBgn0000810.1.mrna1;Target=FBgn0000810.1 979 1059 +
Chr1	stalkie_big_nohaplotig	exon	129653867	129654844	99	-	.	Parent=FBgn0000810.1.mrna1;Target=FBgn0000810.1 1 978 +
Chr1	stalkie_big_nohaplotig	CDS	129651093	129651173	.	-	0	Parent=FBgn0000810.1.mrna1;Target=FBgn0000810.1 979 1059 +
Chr1	stalkie_big_nohaplotig	CDS	129653867	129654844	.	-	0	Parent=FBgn0000810.1.mrna1;Target=FBgn0000810.1 1 978 +
Chr1	gffcl	locus	129651856	129652078	.	-	.	ID=RLOC_00011131;geneIDs=comp135522_c0_seq1.path1;transcripts=comp135522_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129651856	129652078	.	-	.	ID=comp135522_c0_seq1.mrna1;geneID=comp135522_c0_seq1.path1;Name=comp135522_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.1;matches=212;mismatches=11;indels=0;unknowns=0;Target=comp135522_c0_seq1 223 1 .;CDS_Target=comp135522_c0_seq1 191 57 .;locus=RLOC_00011131
Chr1	stalkie_big_nohaplotig	exon	129651856	129652078	95	-	.	Parent=comp135522_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129651888	129652022	.	-	0	Parent=comp135522_c0_seq1.mrna1
Chr1	gffcl	locus	129672945	129676518	.	-	.	ID=RLOC_00011134;geneIDs=FBgn0020309.1.path1;transcripts=FBgn0020309.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129672945	129676518	.	-	.	ID=FBgn0020309.1.mrna1;geneID=FBgn0020309.1.path1;Name=FBgn0020309.1;Dir=sensecoverage=100.0;identity=99.7;matches=2181;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011134
Chr1	stalkie_big_nohaplotig	exon	129672945	129673140	100	-	.	Parent=FBgn0020309.1.mrna1;Target=FBgn0020309.1 1992 2187 +
Chr1	stalkie_big_nohaplotig	exon	129673208	129673288	100	-	.	Parent=FBgn0020309.1.mrna1;Target=FBgn0020309.1 1911 1991 +
Chr1	stalkie_big_nohaplotig	exon	129673348	129674020	100	-	.	Parent=FBgn0020309.1.mrna1;Target=FBgn0020309.1 1238 1910 +
Chr1	stalkie_big_nohaplotig	exon	129674083	129674201	99	-	.	Parent=FBgn0020309.1.mrna1;Target=FBgn0020309.1 1119 1237 +
Chr1	stalkie_big_nohaplotig	exon	129674261	129674579	100	-	.	Parent=FBgn0020309.1.mrna1;Target=FBgn0020309.1 800 1118 +
Chr1	stalkie_big_nohaplotig	exon	129674743	129674957	99	-	.	Parent=FBgn0020309.1.mrna1;Target=FBgn0020309.1 585 799 +
Chr1	stalkie_big_nohaplotig	exon	129675935	129676518	99	-	.	Parent=FBgn0020309.1.mrna1;Target=FBgn0020309.1 1 584 +
Chr1	stalkie_big_nohaplotig	CDS	129672945	129673140	.	-	1	Parent=FBgn0020309.1.mrna1;Target=FBgn0020309.1 1992 2187 +
Chr1	stalkie_big_nohaplotig	CDS	129673208	129673288	.	-	1	Parent=FBgn0020309.1.mrna1;Target=FBgn0020309.1 1911 1991 +
Chr1	stalkie_big_nohaplotig	CDS	129673348	129674020	.	-	2	Parent=FBgn0020309.1.mrna1;Target=FBgn0020309.1 1238 1910 +
Chr1	stalkie_big_nohaplotig	CDS	129674083	129674201	.	-	1	Parent=FBgn0020309.1.mrna1;Target=FBgn0020309.1 1119 1237 +
Chr1	stalkie_big_nohaplotig	CDS	129674261	129674579	.	-	2	Parent=FBgn0020309.1.mrna1;Target=FBgn0020309.1 800 1118 +
Chr1	stalkie_big_nohaplotig	CDS	129674743	129674957	.	-	1	Parent=FBgn0020309.1.mrna1;Target=FBgn0020309.1 585 799 +
Chr1	stalkie_big_nohaplotig	CDS	129675935	129676518	.	-	0	Parent=FBgn0020309.1.mrna1;Target=FBgn0020309.1 1 584 +
Chr1	gffcl	locus	129679519	129683255	.	+	.	ID=RLOC_00011135;geneIDs=FBgn0030240.2.path1;transcripts=FBgn0030240.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129679519	129683255	.	+	.	ID=FBgn0030240.2.mrna1;geneID=FBgn0030240.2.path1;Name=FBgn0030240.2;Dir=sensecoverage=100.0;identity=99.3;matches=2061;mismatches=15;indels=0;unknowns=0;locus=RLOC_00011135
Chr1	stalkie_big_nohaplotig	exon	129679519	129679677	100	+	.	Parent=FBgn0030240.2.mrna1;Target=FBgn0030240.2 1 159 +
Chr1	stalkie_big_nohaplotig	exon	129679732	129679983	100	+	.	Parent=FBgn0030240.2.mrna1;Target=FBgn0030240.2 160 411 +
Chr1	stalkie_big_nohaplotig	exon	129680042	129680331	99	+	.	Parent=FBgn0030240.2.mrna1;Target=FBgn0030240.2 412 701 +
Chr1	stalkie_big_nohaplotig	exon	129680385	129680578	98	+	.	Parent=FBgn0030240.2.mrna1;Target=FBgn0030240.2 702 895 +
Chr1	stalkie_big_nohaplotig	exon	129680633	129681392	98	+	.	Parent=FBgn0030240.2.mrna1;Target=FBgn0030240.2 896 1655 +
Chr1	stalkie_big_nohaplotig	exon	129682777	129683133	99	+	.	Parent=FBgn0030240.2.mrna1;Target=FBgn0030240.2 1656 2012 +
Chr1	stalkie_big_nohaplotig	exon	129683192	129683255	100	+	.	Parent=FBgn0030240.2.mrna1;Target=FBgn0030240.2 2013 2076 +
Chr1	stalkie_big_nohaplotig	CDS	129679519	129679677	.	+	0	Parent=FBgn0030240.2.mrna1;Target=FBgn0030240.2 1 159 +
Chr1	stalkie_big_nohaplotig	CDS	129679732	129679983	.	+	0	Parent=FBgn0030240.2.mrna1;Target=FBgn0030240.2 160 411 +
Chr1	stalkie_big_nohaplotig	CDS	129680042	129680331	.	+	0	Parent=FBgn0030240.2.mrna1;Target=FBgn0030240.2 412 701 +
Chr1	stalkie_big_nohaplotig	CDS	129680385	129680578	.	+	1	Parent=FBgn0030240.2.mrna1;Target=FBgn0030240.2 702 895 +
Chr1	stalkie_big_nohaplotig	CDS	129680633	129681392	.	+	2	Parent=FBgn0030240.2.mrna1;Target=FBgn0030240.2 896 1655 +
Chr1	stalkie_big_nohaplotig	CDS	129682777	129683133	.	+	1	Parent=FBgn0030240.2.mrna1;Target=FBgn0030240.2 1656 2012 +
Chr1	stalkie_big_nohaplotig	CDS	129683192	129683255	.	+	1	Parent=FBgn0030240.2.mrna1;Target=FBgn0030240.2 2013 2076 +
Chr1	gffcl	locus	129686531	129687076	.	+	.	ID=RLOC_00011136;geneIDs=FBgn0040389.1.path1;transcripts=FBgn0040389.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129686531	129687076	.	+	.	ID=FBgn0040389.1.mrna1;geneID=FBgn0040389.1.path1;Name=FBgn0040389.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=544;mismatches=2;indels=0;unknowns=0;Target=FBgn0040389.1 546 1 .;locus=RLOC_00011136
Chr1	stalkie_big_nohaplotig	exon	129686531	129687076	99	+	.	Parent=FBgn0040389.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129686531	129687076	.	+	0	Parent=FBgn0040389.1.mrna1
Chr1	gffcl	locus	129687180	129687947	.	-	.	ID=RLOC_00011137;geneIDs=FBgn0030196.1.path1;transcripts=FBgn0030196.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129687180	129687947	.	-	.	ID=FBgn0030196.1.mrna1;geneID=FBgn0030196.1.path1;Name=FBgn0030196.1;Dir=sensecoverage=100.0;identity=99.1;matches=642;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011137
Chr1	stalkie_big_nohaplotig	exon	129687180	129687317	99	-	.	Parent=FBgn0030196.1.mrna1;Target=FBgn0030196.1 511 648 +
Chr1	stalkie_big_nohaplotig	exon	129687374	129687768	98	-	.	Parent=FBgn0030196.1.mrna1;Target=FBgn0030196.1 116 510 +
Chr1	stalkie_big_nohaplotig	exon	129687833	129687947	100	-	.	Parent=FBgn0030196.1.mrna1;Target=FBgn0030196.1 1 115 +
Chr1	stalkie_big_nohaplotig	CDS	129687180	129687317	.	-	0	Parent=FBgn0030196.1.mrna1;Target=FBgn0030196.1 511 648 +
Chr1	stalkie_big_nohaplotig	CDS	129687374	129687768	.	-	2	Parent=FBgn0030196.1.mrna1;Target=FBgn0030196.1 116 510 +
Chr1	stalkie_big_nohaplotig	CDS	129687833	129687947	.	-	0	Parent=FBgn0030196.1.mrna1;Target=FBgn0030196.1 1 115 +
Chr1	gffcl	locus	129692051	129707210	.	+	.	ID=RLOC_00011138;geneIDs=FBgn0030716.1.path1;transcripts=FBgn0030716.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129692051	129707210	.	+	.	ID=FBgn0030716.1.mrna1;geneID=FBgn0030716.1.path1;Name=FBgn0030716.1;Dir=sensecoverage=100.0;identity=99.7;matches=4153;mismatches=10;indels=1;unknowns=0;locus=RLOC_00011138
Chr1	stalkie_big_nohaplotig	exon	129692051	129692109	96	+	.	Parent=FBgn0030716.1.mrna1;Target=FBgn0030716.1 1 60 +
Chr1	stalkie_big_nohaplotig	exon	129692175	129692322	99	+	.	Parent=FBgn0030716.1.mrna1;Target=FBgn0030716.1 61 208 +
Chr1	stalkie_big_nohaplotig	exon	129701397	129701508	100	+	.	Parent=FBgn0030716.1.mrna1;Target=FBgn0030716.1 209 320 +
Chr1	stalkie_big_nohaplotig	exon	129703302	129706690	99	+	.	Parent=FBgn0030716.1.mrna1;Target=FBgn0030716.1 321 3709 +
Chr1	stalkie_big_nohaplotig	exon	129706756	129707210	100	+	.	Parent=FBgn0030716.1.mrna1;Target=FBgn0030716.1 3710 4164 +
Chr1	stalkie_big_nohaplotig	CDS	129692220	129692322	.	+	0	Parent=FBgn0030716.1.mrna1;Target=FBgn0030716.1 106 208 +
Chr1	stalkie_big_nohaplotig	CDS	129701397	129701508	.	+	2	Parent=FBgn0030716.1.mrna1;Target=FBgn0030716.1 209 320 +
Chr1	stalkie_big_nohaplotig	CDS	129703302	129706690	.	+	1	Parent=FBgn0030716.1.mrna1;Target=FBgn0030716.1 321 3709 +
Chr1	stalkie_big_nohaplotig	CDS	129706756	129707210	.	+	2	Parent=FBgn0030716.1.mrna1;Target=FBgn0030716.1 3710 4164 +
Chr1	gffcl	locus	129709039	129709399	.	+	.	ID=RLOC_00011139;geneIDs=comp145319_c0_seq1.path1;transcripts=comp145319_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129709039	129709399	.	+	.	ID=comp145319_c0_seq1.mrna1;geneID=comp145319_c0_seq1.path1;Name=comp145319_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=359;mismatches=2;indels=0;unknowns=0;Target=comp145319_c0_seq1 361 1 .;CDS_Target=comp145319_c0_seq1 356 240 .;locus=RLOC_00011139
Chr1	stalkie_big_nohaplotig	exon	129709039	129709399	99	+	.	Parent=comp145319_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129709278	129709394	.	+	0	Parent=comp145319_c0_seq1.mrna1
Chr1	gffcl	locus	129709448	129710049	.	-	.	ID=RLOC_00011140;geneIDs=comp152457_c0_seq1.path1;transcripts=comp152457_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129709448	129710049	.	-	.	ID=comp152457_c0_seq1.mrna1;geneID=comp152457_c0_seq1.path1;Name=comp152457_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.5;matches=599;mismatches=3;indels=0;unknowns=0;Target=comp152457_c0_seq1 602 1 .;CDS_Target=comp152457_c0_seq1 106 2 .;locus=RLOC_00011140
Chr1	stalkie_big_nohaplotig	exon	129709448	129710049	99	-	.	Parent=comp152457_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129709944	129710048	.	-	0	Parent=comp152457_c0_seq1.mrna1
Chr1	gffcl	locus	129710251	129710546	.	+	.	ID=RLOC_00011141;geneIDs=comp672122_c0_seq1.path1;transcripts=comp672122_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129710251	129710546	.	+	.	ID=comp672122_c0_seq1.mrna1;geneID=comp672122_c0_seq1.path1;Name=comp672122_c0_seq1;Dir=indeterminatecoverage=96.1;identity=98.0;matches=290;mismatches=4;indels=2;unknowns=0;Target=comp672122_c0_seq1 306 13 .;CDS_Target=comp672122_c0_seq1 83 15 .;locus=RLOC_00011141
Chr1	stalkie_big_nohaplotig	exon	129710251	129710546	97	+	.	Parent=comp672122_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129710253	129710322	.	+	0	Parent=comp672122_c0_seq1.mrna1
Chr1	gffcl	locus	129743817	129745115	.	+	.	ID=RLOC_00011142;geneIDs=comp159780_c0_seq1.path1;transcripts=comp159780_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129743817	129745115	.	+	.	ID=comp159780_c0_seq1.mrna1;geneID=comp159780_c0_seq1.path1;Name=comp159780_c0_seq1;Dir=indeterminatecoverage=98.7;identity=98.5;matches=1051;mismatches=16;indels=0;unknowns=0;Target=comp159780_c0_seq1 135 16 .;locus=RLOC_00011142
Chr1	stalkie_big_nohaplotig	exon	129743817	129744044	97	+	.	Parent=comp159780_c0_seq1.mrna1;Target=comp159780_c0_seq1 242 15 .
Chr1	stalkie_big_nohaplotig	exon	129744277	129745115	98	+	.	Parent=comp159780_c0_seq1.mrna1;Target=comp159780_c0_seq1 1081 243 .
Chr1	stalkie_big_nohaplotig	CDS	129743818	129743937	.	+	0	Parent=comp159780_c0_seq1.mrna1
Chr1	gffcl	locus	129750230	129750928	.	-	.	ID=RLOC_00011143;geneIDs=Dv_FBgn0209813.1.path1;transcripts=Dv_FBgn0209813.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129750230	129750928	.	-	.	ID=Dv_FBgn0209813.1.mrna1;geneID=Dv_FBgn0209813.1.path1;Name=Dv_FBgn0209813.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=699;mismatches=0;indels=0;unknowns=0;Target=Dv_FBgn0209813.1 699 1 .;locus=RLOC_00011143
Chr1	stalkie_big_nohaplotig	exon	129750230	129750928	100	-	.	Parent=Dv_FBgn0209813.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129750230	129750928	.	-	0	Parent=Dv_FBgn0209813.1.mrna1
Chr1	gffcl	locus	129754513	129757511	.	-	.	ID=RLOC_00011144;geneIDs=ORF108.path2;transcripts=ORF108.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	129754513	129757511	.	-	.	ID=ORF108.mrna2;geneID=ORF108.path2;Name=ORF108;Dir=indeterminatecoverage=99.3;identity=99.9;matches=2995;mismatches=4;indels=0;unknowns=0;Target=ORF108 2999 1 .;CDS_Target=ORF108 2997 1 .;locus=RLOC_00011144
Chr1	stalkie_big_nohaplotig	exon	129754513	129757511	99	-	.	Parent=ORF108.mrna2
Chr1	stalkie_big_nohaplotig	CDS	129754515	129757511	.	-	0	Parent=ORF108.mrna2
Chr1	gffcl	locus	129762519	129763194	.	+	.	ID=RLOC_00011145;geneIDs=FBgn0029608.1.path1;transcripts=FBgn0029608.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129762519	129763194	.	+	.	ID=FBgn0029608.1.mrna1;geneID=FBgn0029608.1.path1;Name=FBgn0029608.1;Dir=sensecoverage=100.0;identity=99.3;matches=545;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011145
Chr1	stalkie_big_nohaplotig	exon	129762519	129762860	98	+	.	Parent=FBgn0029608.1.mrna1;Target=FBgn0029608.1 1 342 +
Chr1	stalkie_big_nohaplotig	exon	129762928	129763064	100	+	.	Parent=FBgn0029608.1.mrna1;Target=FBgn0029608.1 343 479 +
Chr1	stalkie_big_nohaplotig	exon	129763125	129763194	100	+	.	Parent=FBgn0029608.1.mrna1;Target=FBgn0029608.1 480 549 +
Chr1	stalkie_big_nohaplotig	CDS	129762519	129762860	.	+	0	Parent=FBgn0029608.1.mrna1;Target=FBgn0029608.1 1 342 +
Chr1	stalkie_big_nohaplotig	CDS	129762928	129763064	.	+	0	Parent=FBgn0029608.1.mrna1;Target=FBgn0029608.1 343 479 +
Chr1	stalkie_big_nohaplotig	CDS	129763125	129763194	.	+	1	Parent=FBgn0029608.1.mrna1;Target=FBgn0029608.1 480 549 +
Chr1	gffcl	locus	129765533	129771557	.	+	.	ID=RLOC_00011146;geneIDs=FBgn0029608.2.path1;transcripts=FBgn0029608.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129765533	129771557	.	+	.	ID=FBgn0029608.2.mrna1;geneID=FBgn0029608.2.path1;Name=FBgn0029608.2;Dir=sensecoverage=100.0;identity=99.7;matches=903;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011146
Chr1	stalkie_big_nohaplotig	exon	129765533	129765632	100	+	.	Parent=FBgn0029608.2.mrna1;Target=FBgn0029608.2 1 100 +
Chr1	stalkie_big_nohaplotig	exon	129770363	129770522	100	+	.	Parent=FBgn0029608.2.mrna1;Target=FBgn0029608.2 101 260 +
Chr1	stalkie_big_nohaplotig	exon	129770729	129770810	98	+	.	Parent=FBgn0029608.2.mrna1;Target=FBgn0029608.2 261 342 +
Chr1	stalkie_big_nohaplotig	exon	129770874	129771227	100	+	.	Parent=FBgn0029608.2.mrna1;Target=FBgn0029608.2 343 696 +
Chr1	stalkie_big_nohaplotig	exon	129771290	129771426	99	+	.	Parent=FBgn0029608.2.mrna1;Target=FBgn0029608.2 697 833 +
Chr1	stalkie_big_nohaplotig	exon	129771485	129771557	98	+	.	Parent=FBgn0029608.2.mrna1;Target=FBgn0029608.2 834 906 +
Chr1	stalkie_big_nohaplotig	CDS	129765533	129765632	.	+	0	Parent=FBgn0029608.2.mrna1;Target=FBgn0029608.2 1 100 +
Chr1	stalkie_big_nohaplotig	CDS	129770363	129770522	.	+	2	Parent=FBgn0029608.2.mrna1;Target=FBgn0029608.2 101 260 +
Chr1	stalkie_big_nohaplotig	CDS	129770729	129770810	.	+	1	Parent=FBgn0029608.2.mrna1;Target=FBgn0029608.2 261 342 +
Chr1	stalkie_big_nohaplotig	CDS	129770874	129771227	.	+	0	Parent=FBgn0029608.2.mrna1;Target=FBgn0029608.2 343 696 +
Chr1	stalkie_big_nohaplotig	CDS	129771290	129771426	.	+	0	Parent=FBgn0029608.2.mrna1;Target=FBgn0029608.2 697 833 +
Chr1	stalkie_big_nohaplotig	CDS	129771485	129771557	.	+	1	Parent=FBgn0029608.2.mrna1;Target=FBgn0029608.2 834 906 +
Chr1	gffcl	locus	129775840	129779031	.	+	.	ID=RLOC_00011147;geneIDs=FBgn0023525.1.path1;transcripts=FBgn0023525.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129775840	129779031	.	+	.	ID=FBgn0023525.1.mrna1;geneID=FBgn0023525.1.path1;Name=FBgn0023525.1;Dir=sensecoverage=100.0;identity=99.8;matches=826;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011147
Chr1	stalkie_big_nohaplotig	exon	129775840	129775936	100	+	.	Parent=FBgn0023525.1.mrna1;Target=FBgn0023525.1 1 97 +
Chr1	stalkie_big_nohaplotig	exon	129778047	129778206	100	+	.	Parent=FBgn0023525.1.mrna1;Target=FBgn0023525.1 98 257 +
Chr1	stalkie_big_nohaplotig	exon	129778274	129778355	100	+	.	Parent=FBgn0023525.1.mrna1;Target=FBgn0023525.1 258 339 +
Chr1	stalkie_big_nohaplotig	exon	129778416	129778715	99	+	.	Parent=FBgn0023525.1.mrna1;Target=FBgn0023525.1 340 639 +
Chr1	stalkie_big_nohaplotig	exon	129778771	129778907	99	+	.	Parent=FBgn0023525.1.mrna1;Target=FBgn0023525.1 640 776 +
Chr1	stalkie_big_nohaplotig	exon	129778980	129779031	100	+	.	Parent=FBgn0023525.1.mrna1;Target=FBgn0023525.1 777 828 +
Chr1	stalkie_big_nohaplotig	CDS	129775840	129775936	.	+	0	Parent=FBgn0023525.1.mrna1;Target=FBgn0023525.1 1 97 +
Chr1	stalkie_big_nohaplotig	CDS	129778047	129778206	.	+	2	Parent=FBgn0023525.1.mrna1;Target=FBgn0023525.1 98 257 +
Chr1	stalkie_big_nohaplotig	CDS	129778274	129778355	.	+	1	Parent=FBgn0023525.1.mrna1;Target=FBgn0023525.1 258 339 +
Chr1	stalkie_big_nohaplotig	CDS	129778416	129778715	.	+	0	Parent=FBgn0023525.1.mrna1;Target=FBgn0023525.1 340 639 +
Chr1	stalkie_big_nohaplotig	CDS	129778771	129778907	.	+	0	Parent=FBgn0023525.1.mrna1;Target=FBgn0023525.1 640 776 +
Chr1	stalkie_big_nohaplotig	CDS	129778980	129779031	.	+	1	Parent=FBgn0023525.1.mrna1;Target=FBgn0023525.1 777 828 +
Chr1	gffcl	locus	129780159	129780832	.	+	.	ID=RLOC_00011148;geneIDs=FBgn0029888.1.path1;transcripts=FBgn0029888.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129780159	129780832	.	+	.	ID=FBgn0029888.1.mrna1;geneID=FBgn0029888.1.path1;Name=FBgn0029888.1;Dir=sensecoverage=100.0;identity=99.6;matches=547;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011148
Chr1	stalkie_big_nohaplotig	exon	129780159	129780264	100	+	.	Parent=FBgn0029888.1.mrna1;Target=FBgn0029888.1 1 106 +
Chr1	stalkie_big_nohaplotig	exon	129780334	129780563	100	+	.	Parent=FBgn0029888.1.mrna1;Target=FBgn0029888.1 107 336 +
Chr1	stalkie_big_nohaplotig	exon	129780620	129780832	99	+	.	Parent=FBgn0029888.1.mrna1;Target=FBgn0029888.1 337 549 +
Chr1	stalkie_big_nohaplotig	CDS	129780159	129780264	.	+	0	Parent=FBgn0029888.1.mrna1;Target=FBgn0029888.1 1 106 +
Chr1	stalkie_big_nohaplotig	CDS	129780334	129780563	.	+	2	Parent=FBgn0029888.1.mrna1;Target=FBgn0029888.1 107 336 +
Chr1	stalkie_big_nohaplotig	CDS	129780620	129780832	.	+	0	Parent=FBgn0029888.1.mrna1;Target=FBgn0029888.1 337 549 +
Chr1	gffcl	locus	129781514	129833596	.	.	.	ID=RLOC_00011149;geneIDs=comp97970_c0_seq1.path1,comp153850_c0_seq1.path1;transcripts=comp153850_c0_seq1.mrna1,comp97970_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129781514	129833596	.	+	.	ID=comp153850_c0_seq1.mrna1;geneID=comp153850_c0_seq1.path1;Name=comp153850_c0_seq1;Dir=indeterminatecoverage=78.3;identity=87.2;matches=509;mismatches=7;indels=68;unknowns=0;locus=RLOC_00011149
Chr1	stalkie_big_nohaplotig	exon	129781514	129781523	100	+	.	Parent=comp153850_c0_seq1.mrna1;Target=comp153850_c0_seq1 171 162 .
Chr1	stalkie_big_nohaplotig	exon	129784260	129784270	90	+	.	Parent=comp153850_c0_seq1.mrna1;Target=comp153850_c0_seq1 181 172 .
Chr1	stalkie_big_nohaplotig	exon	129785927	129785957	66	+	.	Parent=comp153850_c0_seq1.mrna1;Target=comp153850_c0_seq1 222 182 .
Chr1	stalkie_big_nohaplotig	exon	129786033	129786037	100	+	.	Parent=comp153850_c0_seq1.mrna1;Target=comp153850_c0_seq1 227 223 .
Chr1	stalkie_big_nohaplotig	exon	129792227	129792239	84	+	.	Parent=comp153850_c0_seq1.mrna1;Target=comp153850_c0_seq1 240 228 .
Chr1	stalkie_big_nohaplotig	exon	129793065	129793072	100	+	.	Parent=comp153850_c0_seq1.mrna1;Target=comp153850_c0_seq1 248 241 .
Chr1	stalkie_big_nohaplotig	exon	129799318	129799323	100	+	.	Parent=comp153850_c0_seq1.mrna1;Target=comp153850_c0_seq1 254 249 .
Chr1	stalkie_big_nohaplotig	exon	129800485	129800490	100	+	.	Parent=comp153850_c0_seq1.mrna1;Target=comp153850_c0_seq1 260 255 .
Chr1	stalkie_big_nohaplotig	exon	129805820	129805821	100	+	.	Parent=comp153850_c0_seq1.mrna1;Target=comp153850_c0_seq1 262 261 .
Chr1	stalkie_big_nohaplotig	exon	129809841	129809845	100	+	.	Parent=comp153850_c0_seq1.mrna1;Target=comp153850_c0_seq1 267 263 .
Chr1	stalkie_big_nohaplotig	exon	129811375	129811382	100	+	.	Parent=comp153850_c0_seq1.mrna1;Target=comp153850_c0_seq1 275 268 .
Chr1	stalkie_big_nohaplotig	exon	129814079	129814090	83	+	.	Parent=comp153850_c0_seq1.mrna1;Target=comp153850_c0_seq1 287 276 .
Chr1	stalkie_big_nohaplotig	exon	129818000	129818009	90	+	.	Parent=comp153850_c0_seq1.mrna1;Target=comp153850_c0_seq1 297 288 .
Chr1	stalkie_big_nohaplotig	exon	129819319	129819326	12	+	.	Parent=comp153850_c0_seq1.mrna1;Target=comp153850_c0_seq1 360 298 .
Chr1	stalkie_big_nohaplotig	exon	129824139	129824147	100	+	.	Parent=comp153850_c0_seq1.mrna1;Target=comp153850_c0_seq1 369 361 .
Chr1	stalkie_big_nohaplotig	exon	129833223	129833596	100	+	.	Parent=comp153850_c0_seq1.mrna1;Target=comp153850_c0_seq1 743 370 .
Chr1	stalkie_big_nohaplotig	CDS	129781514	129781523	.	+	0	Parent=comp153850_c0_seq1.mrna1;Target=comp153850_c0_seq1 171 162 .
Chr1	stalkie_big_nohaplotig	CDS	129784260	129784270	.	+	2	Parent=comp153850_c0_seq1.mrna1;Target=comp153850_c0_seq1 181 172 .
Chr1	stalkie_big_nohaplotig	CDS	129785927	129785933	.	+	0	Parent=comp153850_c0_seq1.mrna1;Target=comp153850_c0_seq1 197 182 .
Chr1	stalkie_big_nohaplotig	mRNA	129832814	129833242	.	-	.	ID=comp97970_c0_seq1.mrna1;geneID=comp97970_c0_seq1.path1;Name=comp97970_c0_seq1;Dir=indeterminatecoverage=97.9;identity=99.5;matches=427;mismatches=2;indels=0;unknowns=0;Target=comp97970_c0_seq1 429 1 .;CDS_Target=comp97970_c0_seq1 155 3 .;locus=RLOC_00011149
Chr1	stalkie_big_nohaplotig	exon	129832814	129833242	99	-	.	Parent=comp97970_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129833088	129833240	.	-	0	Parent=comp97970_c0_seq1.mrna1
Chr1	gffcl	locus	129784460	131502823	.	+	.	ID=RLOC_00011150;geneIDs=comp155687_c0_seq1.path1;transcripts=comp155687_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129784460	131502823	.	+	.	ID=comp155687_c0_seq1.mrna1;geneID=comp155687_c0_seq1.path1;Name=comp155687_c0_seq1;Dir=indeterminatecoverage=93.7;identity=99.6;matches=1110;mismatches=2;indels=2;unknowns=0;Target=comp155687_c0_seq1 141 4 .;locus=RLOC_00011150
Chr1	stalkie_big_nohaplotig	exon	129784460	129785494	99	+	.	Parent=comp155687_c0_seq1.mrna1;Target=comp155687_c0_seq1 1037 2 .
Chr1	stalkie_big_nohaplotig	exon	131428697	131428698	100	+	.	Parent=comp155687_c0_seq1.mrna1;Target=comp155687_c0_seq1 1039 1038 .
Chr1	stalkie_big_nohaplotig	exon	131435364	131435365	100	+	.	Parent=comp155687_c0_seq1.mrna1;Target=comp155687_c0_seq1 1041 1040 .
Chr1	stalkie_big_nohaplotig	exon	131441190	131441192	100	+	.	Parent=comp155687_c0_seq1.mrna1;Target=comp155687_c0_seq1 1044 1042 .
Chr1	stalkie_big_nohaplotig	exon	131447618	131447627	100	+	.	Parent=comp155687_c0_seq1.mrna1;Target=comp155687_c0_seq1 1054 1045 .
Chr1	stalkie_big_nohaplotig	exon	131451145	131451149	100	+	.	Parent=comp155687_c0_seq1.mrna1;Target=comp155687_c0_seq1 1059 1055 .
Chr1	stalkie_big_nohaplotig	exon	131454837	131454852	87	+	.	Parent=comp155687_c0_seq1.mrna1;Target=comp155687_c0_seq1 1074 1060 .
Chr1	stalkie_big_nohaplotig	exon	131456432	131456434	100	+	.	Parent=comp155687_c0_seq1.mrna1;Target=comp155687_c0_seq1 1077 1075 .
Chr1	stalkie_big_nohaplotig	exon	131467585	131467591	100	+	.	Parent=comp155687_c0_seq1.mrna1;Target=comp155687_c0_seq1 1084 1078 .
Chr1	stalkie_big_nohaplotig	exon	131480208	131480212	100	+	.	Parent=comp155687_c0_seq1.mrna1;Target=comp155687_c0_seq1 1089 1085 .
Chr1	stalkie_big_nohaplotig	exon	131482766	131482768	100	+	.	Parent=comp155687_c0_seq1.mrna1;Target=comp155687_c0_seq1 1092 1090 .
Chr1	stalkie_big_nohaplotig	exon	131495351	131495352	100	+	.	Parent=comp155687_c0_seq1.mrna1;Target=comp155687_c0_seq1 1094 1093 .
Chr1	stalkie_big_nohaplotig	exon	131502804	131502823	100	+	.	Parent=comp155687_c0_seq1.mrna1;Target=comp155687_c0_seq1 1114 1095 .
Chr1	stalkie_big_nohaplotig	CDS	129784462	129784599	.	+	0	Parent=comp155687_c0_seq1.mrna1
Chr1	gffcl	locus	129787213	129804515	.	-	.	ID=RLOC_00011151;geneIDs=FBgn0031047.1.path1;transcripts=FBgn0031047.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129787213	129804515	.	-	.	ID=FBgn0031047.1.mrna1;geneID=FBgn0031047.1.path1;Name=FBgn0031047.1;Dir=sensecoverage=100.0;identity=100.0;matches=915;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011151
Chr1	stalkie_big_nohaplotig	exon	129787213	129787390	100	-	.	Parent=FBgn0031047.1.mrna1;Target=FBgn0031047.1 738 915 +
Chr1	stalkie_big_nohaplotig	exon	129787452	129787543	100	-	.	Parent=FBgn0031047.1.mrna1;Target=FBgn0031047.1 646 737 +
Chr1	stalkie_big_nohaplotig	exon	129788534	129788728	100	-	.	Parent=FBgn0031047.1.mrna1;Target=FBgn0031047.1 451 645 +
Chr1	stalkie_big_nohaplotig	exon	129788808	129789188	100	-	.	Parent=FBgn0031047.1.mrna1;Target=FBgn0031047.1 70 450 +
Chr1	stalkie_big_nohaplotig	exon	129804447	129804515	100	-	.	Parent=FBgn0031047.1.mrna1;Target=FBgn0031047.1 1 69 +
Chr1	stalkie_big_nohaplotig	CDS	129787213	129787390	.	-	1	Parent=FBgn0031047.1.mrna1;Target=FBgn0031047.1 738 915 +
Chr1	stalkie_big_nohaplotig	CDS	129787452	129787543	.	-	0	Parent=FBgn0031047.1.mrna1;Target=FBgn0031047.1 646 737 +
Chr1	stalkie_big_nohaplotig	CDS	129788534	129788728	.	-	0	Parent=FBgn0031047.1.mrna1;Target=FBgn0031047.1 451 645 +
Chr1	stalkie_big_nohaplotig	CDS	129788808	129789188	.	-	0	Parent=FBgn0031047.1.mrna1;Target=FBgn0031047.1 70 450 +
Chr1	stalkie_big_nohaplotig	CDS	129804447	129804515	.	-	0	Parent=FBgn0031047.1.mrna1;Target=FBgn0031047.1 1 69 +
Chr1	gffcl	locus	129809139	129819151	.	+	.	ID=RLOC_00011153;geneIDs=FBgn0030753.1.path1;transcripts=FBgn0030753.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129809139	129819151	.	+	.	ID=FBgn0030753.1.mrna1;geneID=FBgn0030753.1.path1;Name=FBgn0030753.1;Dir=sensecoverage=99.7;identity=99.9;matches=1405;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011153
Chr1	stalkie_big_nohaplotig	exon	129809139	129809402	99	+	.	Parent=FBgn0030753.1.mrna1;Target=FBgn0030753.1 5 268 +
Chr1	stalkie_big_nohaplotig	exon	129812827	129813331	100	+	.	Parent=FBgn0030753.1.mrna1;Target=FBgn0030753.1 269 773 +
Chr1	stalkie_big_nohaplotig	exon	129813398	129813520	100	+	.	Parent=FBgn0030753.1.mrna1;Target=FBgn0030753.1 774 896 +
Chr1	stalkie_big_nohaplotig	exon	129818500	129818662	100	+	.	Parent=FBgn0030753.1.mrna1;Target=FBgn0030753.1 897 1059 +
Chr1	stalkie_big_nohaplotig	exon	129818742	129818922	100	+	.	Parent=FBgn0030753.1.mrna1;Target=FBgn0030753.1 1060 1240 +
Chr1	stalkie_big_nohaplotig	exon	129818982	129819151	100	+	.	Parent=FBgn0030753.1.mrna1;Target=FBgn0030753.1 1241 1410 +
Chr1	stalkie_big_nohaplotig	CDS	129809141	129809402	.	+	0	Parent=FBgn0030753.1.mrna1;Target=FBgn0030753.1 7 268 +
Chr1	stalkie_big_nohaplotig	CDS	129812827	129813331	.	+	2	Parent=FBgn0030753.1.mrna1;Target=FBgn0030753.1 269 773 +
Chr1	stalkie_big_nohaplotig	CDS	129813398	129813520	.	+	1	Parent=FBgn0030753.1.mrna1;Target=FBgn0030753.1 774 896 +
Chr1	stalkie_big_nohaplotig	CDS	129818500	129818662	.	+	1	Parent=FBgn0030753.1.mrna1;Target=FBgn0030753.1 897 1059 +
Chr1	stalkie_big_nohaplotig	CDS	129818742	129818922	.	+	0	Parent=FBgn0030753.1.mrna1;Target=FBgn0030753.1 1060 1240 +
Chr1	stalkie_big_nohaplotig	CDS	129818982	129819151	.	+	2	Parent=FBgn0030753.1.mrna1;Target=FBgn0030753.1 1241 1410 +
Chr1	gffcl	locus	129822281	129823378	.	-	.	ID=RLOC_00011154;geneIDs=FBgn0261609.1.path1;transcripts=FBgn0261609.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129822281	129823378	.	-	.	ID=FBgn0261609.1.mrna1;geneID=FBgn0261609.1.path1;Name=FBgn0261609.1;Dir=sensecoverage=100.0;identity=100.0;matches=1038;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011154
Chr1	stalkie_big_nohaplotig	exon	129822281	129822599	100	-	.	Parent=FBgn0261609.1.mrna1;Target=FBgn0261609.1 720 1038 +
Chr1	stalkie_big_nohaplotig	exon	129822660	129823378	100	-	.	Parent=FBgn0261609.1.mrna1;Target=FBgn0261609.1 1 719 +
Chr1	stalkie_big_nohaplotig	CDS	129822281	129822599	.	-	1	Parent=FBgn0261609.1.mrna1;Target=FBgn0261609.1 720 1038 +
Chr1	stalkie_big_nohaplotig	CDS	129822660	129823378	.	-	0	Parent=FBgn0261609.1.mrna1;Target=FBgn0261609.1 1 719 +
Chr1	gffcl	locus	129826266	129832182	.	+	.	ID=RLOC_00011155;geneIDs=FBgn0262734.1.path1;transcripts=FBgn0262734.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129826266	129832182	.	+	.	ID=FBgn0262734.1.mrna1;geneID=FBgn0262734.1.path1;Name=FBgn0262734.1;Dir=sensecoverage=100.0;identity=99.9;matches=926;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011155
Chr1	stalkie_big_nohaplotig	exon	129826266	129826300	100	+	.	Parent=FBgn0262734.1.mrna1;Target=FBgn0262734.1 1 35 +
Chr1	stalkie_big_nohaplotig	exon	129827846	129828142	100	+	.	Parent=FBgn0262734.1.mrna1;Target=FBgn0262734.1 36 332 +
Chr1	stalkie_big_nohaplotig	exon	129829925	129830115	100	+	.	Parent=FBgn0262734.1.mrna1;Target=FBgn0262734.1 333 523 +
Chr1	stalkie_big_nohaplotig	exon	129830470	129830709	99	+	.	Parent=FBgn0262734.1.mrna1;Target=FBgn0262734.1 524 763 +
Chr1	stalkie_big_nohaplotig	exon	129832019	129832182	100	+	.	Parent=FBgn0262734.1.mrna1;Target=FBgn0262734.1 764 927 +
Chr1	stalkie_big_nohaplotig	CDS	129826266	129826300	.	+	0	Parent=FBgn0262734.1.mrna1;Target=FBgn0262734.1 1 35 +
Chr1	stalkie_big_nohaplotig	CDS	129827846	129828142	.	+	1	Parent=FBgn0262734.1.mrna1;Target=FBgn0262734.1 36 332 +
Chr1	stalkie_big_nohaplotig	CDS	129829925	129830115	.	+	1	Parent=FBgn0262734.1.mrna1;Target=FBgn0262734.1 333 523 +
Chr1	stalkie_big_nohaplotig	CDS	129830470	129830709	.	+	2	Parent=FBgn0262734.1.mrna1;Target=FBgn0262734.1 524 763 +
Chr1	stalkie_big_nohaplotig	CDS	129832019	129832182	.	+	2	Parent=FBgn0262734.1.mrna1;Target=FBgn0262734.1 764 927 +
Chr1	gffcl	locus	129845527	129846116	.	-	.	ID=RLOC_00011156;geneIDs=comp146003_c0_seq1.path1;transcripts=comp146003_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129845527	129846116	.	-	.	ID=comp146003_c0_seq1.mrna1;geneID=comp146003_c0_seq1.path1;Name=comp146003_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.5;matches=589;mismatches=1;indels=47;unknowns=0;Target=comp146003_c0_seq1 637 1 .;CDS_Target=comp146003_c0_seq1 600 499 .;locus=RLOC_00011156
Chr1	stalkie_big_nohaplotig	exon	129845527	129846116	92	-	.	Parent=comp146003_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129845564	129845665	.	-	0	Parent=comp146003_c0_seq1.mrna1
Chr1	gffcl	locus	129850651	129852646	.	-	.	ID=RLOC_00011157;geneIDs=FBgn0036862.1.path1;transcripts=FBgn0036862.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129850651	129852646	.	-	.	ID=FBgn0036862.1.mrna1;geneID=FBgn0036862.1.path1;Name=FBgn0036862.1;Dir=sensecoverage=100.0;identity=99.1;matches=1924;mismatches=11;indels=6;unknowns=0;locus=RLOC_00011157
Chr1	stalkie_big_nohaplotig	exon	129850651	129852420	99	-	.	Parent=FBgn0036862.1.mrna1;Target=FBgn0036862.1 166 1941 +
Chr1	stalkie_big_nohaplotig	exon	129852482	129852646	100	-	.	Parent=FBgn0036862.1.mrna1;Target=FBgn0036862.1 1 165 +
Chr1	stalkie_big_nohaplotig	CDS	129850651	129852420	.	-	0	Parent=FBgn0036862.1.mrna1;Target=FBgn0036862.1 166 1941 +
Chr1	stalkie_big_nohaplotig	CDS	129852482	129852646	.	-	0	Parent=FBgn0036862.1.mrna1;Target=FBgn0036862.1 1 165 +
Chr1	gffcl	locus	129875699	129876793	.	+	.	ID=RLOC_00011158;geneIDs=comp119298_c0_seq1.path1;transcripts=comp119298_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129875699	129876793	.	+	.	ID=comp119298_c0_seq1.mrna1;geneID=comp119298_c0_seq1.path1;Name=comp119298_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1089;mismatches=5;indels=2;unknowns=0;Target=comp119298_c0_seq1 1095 1 .;CDS_Target=comp119298_c0_seq1 147 124 .;locus=RLOC_00011158
Chr1	stalkie_big_nohaplotig	exon	129875699	129876793	99	+	.	Parent=comp119298_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129875821	129875844	.	+	0	Parent=comp119298_c0_seq1.mrna1
Chr1	gffcl	locus	129883006	129884646	.	+	.	ID=RLOC_00011159;geneIDs=FBgn0028380.1.path1;transcripts=FBgn0028380.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129883006	129884646	.	+	.	ID=FBgn0028380.1.mrna1;geneID=FBgn0028380.1.path1;Name=FBgn0028380.1;Dir=sensecoverage=98.5;identity=99.7;matches=1126;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011159
Chr1	stalkie_big_nohaplotig	exon	129883006	129883173	99	+	.	Parent=FBgn0028380.1.mrna1;Target=FBgn0028380.1 18 185 +
Chr1	stalkie_big_nohaplotig	exon	129883228	129883327	100	+	.	Parent=FBgn0028380.1.mrna1;Target=FBgn0028380.1 186 285 +
Chr1	stalkie_big_nohaplotig	exon	129883414	129883488	100	+	.	Parent=FBgn0028380.1.mrna1;Target=FBgn0028380.1 286 360 +
Chr1	stalkie_big_nohaplotig	exon	129883561	129883737	98	+	.	Parent=FBgn0028380.1.mrna1;Target=FBgn0028380.1 361 537 +
Chr1	stalkie_big_nohaplotig	exon	129883847	129883964	100	+	.	Parent=FBgn0028380.1.mrna1;Target=FBgn0028380.1 538 655 +
Chr1	stalkie_big_nohaplotig	exon	129884034	129884353	100	+	.	Parent=FBgn0028380.1.mrna1;Target=FBgn0028380.1 656 975 +
Chr1	stalkie_big_nohaplotig	exon	129884416	129884510	100	+	.	Parent=FBgn0028380.1.mrna1;Target=FBgn0028380.1 976 1070 +
Chr1	stalkie_big_nohaplotig	exon	129884571	129884646	100	+	.	Parent=FBgn0028380.1.mrna1;Target=FBgn0028380.1 1071 1146 +
Chr1	stalkie_big_nohaplotig	CDS	129883007	129883173	.	+	0	Parent=FBgn0028380.1.mrna1;Target=FBgn0028380.1 19 185 +
Chr1	stalkie_big_nohaplotig	CDS	129883228	129883327	.	+	1	Parent=FBgn0028380.1.mrna1;Target=FBgn0028380.1 186 285 +
Chr1	stalkie_big_nohaplotig	CDS	129883414	129883488	.	+	0	Parent=FBgn0028380.1.mrna1;Target=FBgn0028380.1 286 360 +
Chr1	stalkie_big_nohaplotig	CDS	129883561	129883737	.	+	0	Parent=FBgn0028380.1.mrna1;Target=FBgn0028380.1 361 537 +
Chr1	stalkie_big_nohaplotig	CDS	129883847	129883964	.	+	0	Parent=FBgn0028380.1.mrna1;Target=FBgn0028380.1 538 655 +
Chr1	stalkie_big_nohaplotig	CDS	129884034	129884353	.	+	2	Parent=FBgn0028380.1.mrna1;Target=FBgn0028380.1 656 975 +
Chr1	stalkie_big_nohaplotig	CDS	129884416	129884510	.	+	0	Parent=FBgn0028380.1.mrna1;Target=FBgn0028380.1 976 1070 +
Chr1	stalkie_big_nohaplotig	CDS	129884571	129884646	.	+	1	Parent=FBgn0028380.1.mrna1;Target=FBgn0028380.1 1071 1146 +
Chr1	gffcl	locus	129888588	129891376	.	-	.	ID=RLOC_00011160;geneIDs=FBgn0030593.1.path1;transcripts=FBgn0030593.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129888588	129891376	.	-	.	ID=FBgn0030593.1.mrna1;geneID=FBgn0030593.1.path1;Name=FBgn0030593.1;Dir=sensecoverage=100.0;identity=99.4;matches=1870;mismatches=11;indels=0;unknowns=0;locus=RLOC_00011160
Chr1	stalkie_big_nohaplotig	exon	129888588	129889498	99	-	.	Parent=FBgn0030593.1.mrna1;Target=FBgn0030593.1 971 1881 +
Chr1	stalkie_big_nohaplotig	exon	129889559	129890237	98	-	.	Parent=FBgn0030593.1.mrna1;Target=FBgn0030593.1 292 970 +
Chr1	stalkie_big_nohaplotig	exon	129890300	129890433	99	-	.	Parent=FBgn0030593.1.mrna1;Target=FBgn0030593.1 158 291 +
Chr1	stalkie_big_nohaplotig	exon	129891220	129891376	100	-	.	Parent=FBgn0030593.1.mrna1;Target=FBgn0030593.1 1 157 +
Chr1	stalkie_big_nohaplotig	CDS	129888588	129889498	.	-	2	Parent=FBgn0030593.1.mrna1;Target=FBgn0030593.1 971 1881 +
Chr1	stalkie_big_nohaplotig	CDS	129889559	129890237	.	-	0	Parent=FBgn0030593.1.mrna1;Target=FBgn0030593.1 292 970 +
Chr1	stalkie_big_nohaplotig	CDS	129890300	129890433	.	-	2	Parent=FBgn0030593.1.mrna1;Target=FBgn0030593.1 158 291 +
Chr1	stalkie_big_nohaplotig	CDS	129891220	129891376	.	-	0	Parent=FBgn0030593.1.mrna1;Target=FBgn0030593.1 1 157 +
Chr1	gffcl	locus	129910265	129912315	.	-	.	ID=RLOC_00011161;geneIDs=FBgn0030596.1.path1;transcripts=FBgn0030596.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129910265	129912315	.	-	.	ID=FBgn0030596.1.mrna1;geneID=FBgn0030596.1.path1;Name=FBgn0030596.1;Dir=sensecoverage=100.0;identity=98.8;matches=1903;mismatches=23;indels=0;unknowns=0;locus=RLOC_00011161
Chr1	stalkie_big_nohaplotig	exon	129910265	129910624	99	-	.	Parent=FBgn0030596.1.mrna1;Target=FBgn0030596.1 1567 1926 +
Chr1	stalkie_big_nohaplotig	exon	129910681	129911523	98	-	.	Parent=FBgn0030596.1.mrna1;Target=FBgn0030596.1 724 1566 +
Chr1	stalkie_big_nohaplotig	exon	129911593	129912315	98	-	.	Parent=FBgn0030596.1.mrna1;Target=FBgn0030596.1 1 723 +
Chr1	stalkie_big_nohaplotig	CDS	129910265	129910624	.	-	0	Parent=FBgn0030596.1.mrna1;Target=FBgn0030596.1 1567 1926 +
Chr1	stalkie_big_nohaplotig	CDS	129910681	129911523	.	-	0	Parent=FBgn0030596.1.mrna1;Target=FBgn0030596.1 724 1566 +
Chr1	stalkie_big_nohaplotig	CDS	129911593	129912315	.	-	0	Parent=FBgn0030596.1.mrna1;Target=FBgn0030596.1 1 723 +
Chr1	gffcl	locus	129914970	129917017	.	-	.	ID=RLOC_00011162;geneIDs=FBgn0030594.2.path1;transcripts=FBgn0030594.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129914970	129917017	.	-	.	ID=FBgn0030594.2.mrna1;geneID=FBgn0030594.2.path1;Name=FBgn0030594.2;Dir=sensecoverage=100.0;identity=99.0;matches=1949;mismatches=19;indels=0;unknowns=0;locus=RLOC_00011162
Chr1	stalkie_big_nohaplotig	exon	129914970	129916514	98	-	.	Parent=FBgn0030594.2.mrna1;Target=FBgn0030594.2 424 1968 +
Chr1	stalkie_big_nohaplotig	exon	129916595	129917017	99	-	.	Parent=FBgn0030594.2.mrna1;Target=FBgn0030594.2 1 423 +
Chr1	stalkie_big_nohaplotig	CDS	129914970	129916514	.	-	0	Parent=FBgn0030594.2.mrna1;Target=FBgn0030594.2 424 1968 +
Chr1	stalkie_big_nohaplotig	CDS	129916595	129917017	.	-	0	Parent=FBgn0030594.2.mrna1;Target=FBgn0030594.2 1 423 +
Chr1	gffcl	locus	129921142	129923122	.	-	.	ID=RLOC_00011163;geneIDs=FBgn0030598.1.path1;transcripts=FBgn0030598.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129921142	129923122	.	-	.	ID=FBgn0030598.1.mrna1;geneID=FBgn0030598.1.path1;Name=FBgn0030598.1;Dir=sensecoverage=100.0;identity=98.4;matches=1886;mismatches=31;indels=0;unknowns=0;locus=RLOC_00011163
Chr1	stalkie_big_nohaplotig	exon	129921142	129922637	98	-	.	Parent=FBgn0030598.1.mrna1;Target=FBgn0030598.1 422 1917 +
Chr1	stalkie_big_nohaplotig	exon	129922702	129923122	99	-	.	Parent=FBgn0030598.1.mrna1;Target=FBgn0030598.1 1 421 +
Chr1	stalkie_big_nohaplotig	CDS	129921142	129922637	.	-	2	Parent=FBgn0030598.1.mrna1;Target=FBgn0030598.1 422 1917 +
Chr1	stalkie_big_nohaplotig	CDS	129922702	129923122	.	-	0	Parent=FBgn0030598.1.mrna1;Target=FBgn0030598.1 1 421 +
Chr1	gffcl	locus	129934433	129937028	.	.	.	ID=RLOC_00011164;geneIDs=ORF1835.path1,comp163746_c0_seq1.path1;transcripts=ORF1835.mrna1,comp163746_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129934433	129935419	.	-	.	ID=ORF1835.mrna1;geneID=ORF1835.path1;Name=ORF1835;Dir=indeterminatecoverage=100.0;identity=99.0;matches=977;mismatches=10;indels=0;unknowns=0;Target=ORF1835 987 1 .;locus=RLOC_00011164
Chr1	stalkie_big_nohaplotig	exon	129934433	129935419	98	-	.	Parent=ORF1835.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129934433	129935419	.	-	0	Parent=ORF1835.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129934728	129937028	.	+	.	ID=comp163746_c0_seq1.mrna1;geneID=comp163746_c0_seq1.path1;Name=comp163746_c0_seq1;Dir=antisensecoverage=99.9;identity=98.8;matches=1757;mismatches=21;indels=0;unknowns=0;Target=comp163746_c0_seq1 1436 1552 .;locus=RLOC_00011164
Chr1	stalkie_big_nohaplotig	exon	129934728	129934864	94	+	.	Parent=comp163746_c0_seq1.mrna1;Target=comp163746_c0_seq1 1643 1779 -
Chr1	stalkie_big_nohaplotig	exon	129935388	129937028	99	+	.	Parent=comp163746_c0_seq1.mrna1;Target=comp163746_c0_seq1 2 1642 -
Chr1	stalkie_big_nohaplotig	CDS	129935478	129935594	.	+	0	Parent=comp163746_c0_seq1.mrna1
Chr1	gffcl	locus	129940313	130821408	.	+	.	ID=RLOC_00011165;geneIDs=FBgn0264078.1.path1;transcripts=FBgn0264078.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129940313	130821408	.	+	.	ID=FBgn0264078.1.mrna1;geneID=FBgn0264078.1.path1;Name=FBgn0264078.1;Dir=sensecoverage=96.3;identity=99.6;matches=1257;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011165
Chr1	stalkie_big_nohaplotig	exon	129940313	129940506	98	+	.	Parent=FBgn0264078.1.mrna1;Target=FBgn0264078.1 50 243 +
Chr1	stalkie_big_nohaplotig	exon	129952079	129952217	100	+	.	Parent=FBgn0264078.1.mrna1;Target=FBgn0264078.1 244 382 +
Chr1	stalkie_big_nohaplotig	exon	130817853	130818420	99	+	.	Parent=FBgn0264078.1.mrna1;Target=FBgn0264078.1 383 950 +
Chr1	stalkie_big_nohaplotig	exon	130819943	130820126	100	+	.	Parent=FBgn0264078.1.mrna1;Target=FBgn0264078.1 951 1134 +
Chr1	stalkie_big_nohaplotig	exon	130821232	130821408	100	+	.	Parent=FBgn0264078.1.mrna1;Target=FBgn0264078.1 1135 1311 +
Chr1	stalkie_big_nohaplotig	CDS	129940315	129940506	.	+	0	Parent=FBgn0264078.1.mrna1;Target=FBgn0264078.1 52 243 +
Chr1	stalkie_big_nohaplotig	CDS	129952079	129952217	.	+	0	Parent=FBgn0264078.1.mrna1;Target=FBgn0264078.1 244 382 +
Chr1	stalkie_big_nohaplotig	CDS	130817853	130818420	.	+	2	Parent=FBgn0264078.1.mrna1;Target=FBgn0264078.1 383 950 +
Chr1	stalkie_big_nohaplotig	CDS	130819943	130820126	.	+	1	Parent=FBgn0264078.1.mrna1;Target=FBgn0264078.1 951 1134 +
Chr1	stalkie_big_nohaplotig	CDS	130821232	130821408	.	+	0	Parent=FBgn0264078.1.mrna1;Target=FBgn0264078.1 1135 1311 +
Chr1	gffcl	locus	129968681	129969059	.	+	.	ID=RLOC_00011166;geneIDs=comp145357_c0_seq1.path1;transcripts=comp145357_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129968681	129969059	.	+	.	ID=comp145357_c0_seq1.mrna1;geneID=comp145357_c0_seq1.path1;Name=comp145357_c0_seq1;Dir=indeterminatecoverage=99.0;identity=97.1;matches=368;mismatches=11;indels=0;unknowns=0;Target=comp145357_c0_seq1 379 1 .;CDS_Target=comp145357_c0_seq1 203 171 .;locus=RLOC_00011166
Chr1	stalkie_big_nohaplotig	exon	129968681	129969059	97	+	.	Parent=comp145357_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129968851	129968883	.	+	0	Parent=comp145357_c0_seq1.mrna1
Chr1	gffcl	locus	129993750	129994033	.	+	.	ID=RLOC_00011167;geneIDs=comp1781195_c0_seq1.path1;transcripts=comp1781195_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	129993750	129994033	.	+	.	ID=comp1781195_c0_seq1.mrna1;geneID=comp1781195_c0_seq1.path1;Name=comp1781195_c0_seq1;Dir=indeterminatecoverage=97.8;identity=88.1;matches=275;mismatches=9;indels=28;unknowns=0;Target=comp1781195_c0_seq1 319 8 .;CDS_Target=comp1781195_c0_seq1 252 184 .;locus=RLOC_00011167
Chr1	stalkie_big_nohaplotig	exon	129993750	129994033	88	+	.	Parent=comp1781195_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	129993898	129993966	.	+	0	Parent=comp1781195_c0_seq1.mrna1
Chr1	gffcl	locus	130099316	130101303	.	+	.	ID=RLOC_00011169;geneIDs=FBgn0030587.2.path1;transcripts=FBgn0030587.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130099316	130101303	.	+	.	ID=FBgn0030587.2.mrna1;geneID=FBgn0030587.2.path1;Name=FBgn0030587.2;Dir=sensecoverage=100.0;identity=99.0;matches=1907;mismatches=19;indels=0;unknowns=0;locus=RLOC_00011169
Chr1	stalkie_big_nohaplotig	exon	130099316	130099514	98	+	.	Parent=FBgn0030587.2.mrna1;Target=FBgn0030587.2 1 199 +
Chr1	stalkie_big_nohaplotig	exon	130099577	130101303	99	+	.	Parent=FBgn0030587.2.mrna1;Target=FBgn0030587.2 200 1926 +
Chr1	stalkie_big_nohaplotig	CDS	130099316	130099514	.	+	0	Parent=FBgn0030587.2.mrna1;Target=FBgn0030587.2 1 199 +
Chr1	stalkie_big_nohaplotig	CDS	130099577	130101303	.	+	2	Parent=FBgn0030587.2.mrna1;Target=FBgn0030587.2 200 1926 +
Chr1	gffcl	locus	130106136	130111592	.	+	.	ID=RLOC_00011170;geneIDs=FBgn0030587.1.path1;transcripts=FBgn0030587.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130106136	130111592	.	+	.	ID=FBgn0030587.1.mrna1;geneID=FBgn0030587.1.path1;Name=FBgn0030587.1;Dir=sensecoverage=99.9;identity=99.4;matches=1867;mismatches=12;indels=0;unknowns=0;locus=RLOC_00011170
Chr1	stalkie_big_nohaplotig	exon	130106136	130106299	98	+	.	Parent=FBgn0030587.1.mrna1;Target=FBgn0030587.1 3 166 +
Chr1	stalkie_big_nohaplotig	exon	130109878	130111592	99	+	.	Parent=FBgn0030587.1.mrna1;Target=FBgn0030587.1 167 1881 +
Chr1	stalkie_big_nohaplotig	CDS	130106137	130106299	.	+	0	Parent=FBgn0030587.1.mrna1;Target=FBgn0030587.1 4 166 +
Chr1	stalkie_big_nohaplotig	CDS	130109878	130111592	.	+	2	Parent=FBgn0030587.1.mrna1;Target=FBgn0030587.1 167 1881 +
Chr1	gffcl	locus	130136864	130138961	.	+	.	ID=RLOC_00011171;geneIDs=FBgn0023177.1.path1;transcripts=FBgn0023177.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130136864	130138961	.	+	.	ID=FBgn0023177.1.mrna1;geneID=FBgn0023177.1.path1;Name=FBgn0023177.1;Dir=sensecoverage=100.0;identity=99.8;matches=1051;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011171
Chr1	stalkie_big_nohaplotig	exon	130136864	130137789	99	+	.	Parent=FBgn0023177.1.mrna1;Target=FBgn0023177.1 1 926 +
Chr1	stalkie_big_nohaplotig	exon	130138835	130138961	100	+	.	Parent=FBgn0023177.1.mrna1;Target=FBgn0023177.1 927 1053 +
Chr1	stalkie_big_nohaplotig	CDS	130136864	130137789	.	+	0	Parent=FBgn0023177.1.mrna1;Target=FBgn0023177.1 1 926 +
Chr1	stalkie_big_nohaplotig	CDS	130138835	130138961	.	+	1	Parent=FBgn0023177.1.mrna1;Target=FBgn0023177.1 927 1053 +
Chr1	gffcl	locus	130149791	130153785	.	+	.	ID=RLOC_00011172;geneIDs=FBgn0011283.2.path1;transcripts=FBgn0011283.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130149791	130153785	.	+	.	ID=FBgn0011283.2.mrna1;geneID=FBgn0011283.2.path1;Name=FBgn0011283.2;Dir=sensecoverage=100.0;identity=100.0;matches=426;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011172
Chr1	stalkie_big_nohaplotig	exon	130149791	130149844	100	+	.	Parent=FBgn0011283.2.mrna1;Target=FBgn0011283.2 1 54 +
Chr1	stalkie_big_nohaplotig	exon	130152454	130152526	100	+	.	Parent=FBgn0011283.2.mrna1;Target=FBgn0011283.2 55 127 +
Chr1	stalkie_big_nohaplotig	exon	130152660	130152748	100	+	.	Parent=FBgn0011283.2.mrna1;Target=FBgn0011283.2 128 216 +
Chr1	stalkie_big_nohaplotig	exon	130152819	130152955	100	+	.	Parent=FBgn0011283.2.mrna1;Target=FBgn0011283.2 217 353 +
Chr1	stalkie_big_nohaplotig	exon	130153713	130153785	100	+	.	Parent=FBgn0011283.2.mrna1;Target=FBgn0011283.2 354 426 +
Chr1	stalkie_big_nohaplotig	CDS	130149791	130149844	.	+	0	Parent=FBgn0011283.2.mrna1;Target=FBgn0011283.2 1 54 +
Chr1	stalkie_big_nohaplotig	CDS	130152454	130152526	.	+	0	Parent=FBgn0011283.2.mrna1;Target=FBgn0011283.2 55 127 +
Chr1	stalkie_big_nohaplotig	CDS	130152660	130152748	.	+	2	Parent=FBgn0011283.2.mrna1;Target=FBgn0011283.2 128 216 +
Chr1	stalkie_big_nohaplotig	CDS	130152819	130152955	.	+	0	Parent=FBgn0011283.2.mrna1;Target=FBgn0011283.2 217 353 +
Chr1	stalkie_big_nohaplotig	CDS	130153713	130153785	.	+	1	Parent=FBgn0011283.2.mrna1;Target=FBgn0011283.2 354 426 +
Chr1	gffcl	locus	130151376	130152228	.	-	.	ID=RLOC_00011173;geneIDs=comp158287_c0_seq1.path1;transcripts=comp158287_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130151376	130152228	.	-	.	ID=comp158287_c0_seq1.mrna1;geneID=comp158287_c0_seq1.path1;Name=comp158287_c0_seq1;Dir=indeterminatecoverage=97.3;identity=91.7;matches=787;mismatches=22;indels=49;unknowns=0;Target=comp158287_c0_seq1 837 24 .;CDS_Target=comp158287_c0_seq1 700 506 .;locus=RLOC_00011173
Chr1	stalkie_big_nohaplotig	exon	130151376	130152228	91	-	.	Parent=comp158287_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130151513	130151707	.	-	0	Parent=comp158287_c0_seq1.mrna1
Chr1	gffcl	locus	130152977	130153663	.	+	.	ID=RLOC_00011174;geneIDs=comp159180_c0_seq1.path1;transcripts=comp159180_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130152977	130153663	.	+	.	ID=comp159180_c0_seq1.mrna1;geneID=comp159180_c0_seq1.path1;Name=comp159180_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=672;mismatches=12;indels=7;unknowns=0;Target=comp159180_c0_seq1 688 1 .;CDS_Target=comp159180_c0_seq1 419 333 .;locus=RLOC_00011174
Chr1	stalkie_big_nohaplotig	exon	130152977	130153663	97	+	.	Parent=comp159180_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130153311	130153397	.	+	0	Parent=comp159180_c0_seq1.mrna1
Chr1	gffcl	locus	130160026	130162930	.	+	.	ID=RLOC_00011175;geneIDs=comp157039_c0_seq1.path1;transcripts=comp157039_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130160026	130162930	.	+	.	ID=comp157039_c0_seq1.mrna1;geneID=comp157039_c0_seq1.path1;Name=comp157039_c0_seq1;Dir=antisensecoverage=98.2;identity=96.9;matches=626;mismatches=15;indels=5;unknowns=0;locus=RLOC_00011175
Chr1	stalkie_big_nohaplotig	exon	130160026	130160136	98	+	.	Parent=comp157039_c0_seq1.mrna1;Target=comp157039_c0_seq1 548 658 -
Chr1	stalkie_big_nohaplotig	exon	130162124	130162196	100	+	.	Parent=comp157039_c0_seq1.mrna1;Target=comp157039_c0_seq1 475 547 -
Chr1	stalkie_big_nohaplotig	exon	130162287	130162375	95	+	.	Parent=comp157039_c0_seq1.mrna1;Target=comp157039_c0_seq1 386 474 -
Chr1	stalkie_big_nohaplotig	exon	130162494	130162630	97	+	.	Parent=comp157039_c0_seq1.mrna1;Target=comp157039_c0_seq1 249 385 -
Chr1	stalkie_big_nohaplotig	exon	130162700	130162930	95	+	.	Parent=comp157039_c0_seq1.mrna1;Target=comp157039_c0_seq1 13 248 -
Chr1	stalkie_big_nohaplotig	CDS	130160086	130160136	.	+	0	Parent=comp157039_c0_seq1.mrna1;Target=comp157039_c0_seq1 548 598 .
Chr1	stalkie_big_nohaplotig	CDS	130162124	130162196	.	+	0	Parent=comp157039_c0_seq1.mrna1;Target=comp157039_c0_seq1 475 547 .
Chr1	stalkie_big_nohaplotig	CDS	130162287	130162375	.	+	2	Parent=comp157039_c0_seq1.mrna1;Target=comp157039_c0_seq1 386 474 .
Chr1	stalkie_big_nohaplotig	CDS	130162494	130162630	.	+	0	Parent=comp157039_c0_seq1.mrna1;Target=comp157039_c0_seq1 249 385 .
Chr1	stalkie_big_nohaplotig	CDS	130162700	130162775	.	+	1	Parent=comp157039_c0_seq1.mrna1;Target=comp157039_c0_seq1 173 248 .
Chr1	gffcl	locus	130160530	130161095	.	-	.	ID=RLOC_00011176;geneIDs=comp151409_c0_seq1.path1;transcripts=comp151409_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130160530	130161095	.	-	.	ID=comp151409_c0_seq1.mrna1;geneID=comp151409_c0_seq1.path1;Name=comp151409_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.2;matches=533;mismatches=27;indels=6;unknowns=0;Target=comp151409_c0_seq1 560 1 .;CDS_Target=comp151409_c0_seq1 113 3 .;locus=RLOC_00011176
Chr1	stalkie_big_nohaplotig	exon	130160530	130161095	94	-	.	Parent=comp151409_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130160983	130161093	.	-	0	Parent=comp151409_c0_seq1.mrna1
Chr1	gffcl	locus	130171701	130172237	.	+	.	ID=RLOC_00011177;geneIDs=comp58336_c0_seq1.path1;transcripts=comp58336_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130171701	130172237	.	+	.	ID=comp58336_c0_seq1.mrna1;geneID=comp58336_c0_seq1.path1;Name=comp58336_c0_seq1;Dir=sensecoverage=96.9;identity=98.4;matches=424;mismatches=7;indels=0;unknowns=0;locus=RLOC_00011177
Chr1	stalkie_big_nohaplotig	exon	130171701	130171944	98	+	.	Parent=comp58336_c0_seq1.mrna1;Target=comp58336_c0_seq1 1 244 +
Chr1	stalkie_big_nohaplotig	exon	130172051	130172237	98	+	.	Parent=comp58336_c0_seq1.mrna1;Target=comp58336_c0_seq1 245 431 +
Chr1	stalkie_big_nohaplotig	CDS	130171890	130171944	.	+	0	Parent=comp58336_c0_seq1.mrna1;Target=comp58336_c0_seq1 190 244 +
Chr1	stalkie_big_nohaplotig	CDS	130172051	130172145	.	+	2	Parent=comp58336_c0_seq1.mrna1;Target=comp58336_c0_seq1 245 339 +
Chr1	gffcl	locus	130178288	130179090	.	.	.	ID=RLOC_00011178;geneIDs=comp134657_c0_seq1.path1,comp151484_c0_seq1.path1;transcripts=comp151484_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130178288	130178710	.	-	.	ID=comp151484_c0_seq1.mrna1;geneID=comp151484_c0_seq1.path1;Name=comp151484_c0_seq1;Dir=indeterminatecoverage=99.3;identity=95.8;matches=407;mismatches=12;indels=6;unknowns=0;Target=comp151484_c0_seq1 421 1 .;CDS_Target=comp151484_c0_seq1 141 1 .;locus=RLOC_00011178
Chr1	stalkie_big_nohaplotig	exon	130178288	130178710	95	-	.	Parent=comp151484_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130178570	130178710	.	-	0	Parent=comp151484_c0_seq1.mrna1
Chr1	gffcl	locus	130183207	130183635	.	+	.	ID=RLOC_00011179;geneIDs=comp119679_c0_seq1.path1;transcripts=comp119679_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130183207	130183635	.	+	.	ID=comp119679_c0_seq1.mrna1;geneID=comp119679_c0_seq1.path1;Name=comp119679_c0_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=356;mismatches=2;indels=0;unknowns=0;Target=comp119679_c0_seq1 111 221 +;locus=RLOC_00011179
Chr1	stalkie_big_nohaplotig	exon	130183207	130183547	99	+	.	Parent=comp119679_c0_seq1.mrna1;Target=comp119679_c0_seq1 1 341 +
Chr1	stalkie_big_nohaplotig	exon	130183619	130183635	100	+	.	Parent=comp119679_c0_seq1.mrna1;Target=comp119679_c0_seq1 342 358 +
Chr1	stalkie_big_nohaplotig	CDS	130183317	130183427	.	+	0	Parent=comp119679_c0_seq1.mrna1
Chr1	gffcl	locus	130183722	130184667	.	-	.	ID=RLOC_00011180;geneIDs=comp159282_c0_seq1.path1;transcripts=comp159282_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130183722	130184667	.	-	.	ID=comp159282_c0_seq1.mrna1;geneID=comp159282_c0_seq1.path1;Name=comp159282_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.3;matches=883;mismatches=15;indels=48;unknowns=0;Target=comp159282_c0_seq1 898 1 .;CDS_Target=comp159282_c0_seq1 419 279 .;locus=RLOC_00011180
Chr1	stalkie_big_nohaplotig	exon	130183722	130184667	93	-	.	Parent=comp159282_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130184247	130184388	.	-	0	Parent=comp159282_c0_seq1.mrna1
Chr1	gffcl	locus	130188811	130189175	.	-	.	ID=RLOC_00011181;geneIDs=comp61767_c0_seq1.path1;transcripts=comp61767_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130188811	130189175	.	-	.	ID=comp61767_c0_seq1.mrna1;geneID=comp61767_c0_seq1.path1;Name=comp61767_c0_seq1;Dir=indeterminatecoverage=97.3;identity=98.4;matches=359;mismatches=6;indels=0;unknowns=0;Target=comp61767_c0_seq1 374 10 .;CDS_Target=comp61767_c0_seq1 295 11 .;locus=RLOC_00011181
Chr1	stalkie_big_nohaplotig	exon	130188811	130189175	98	-	.	Parent=comp61767_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130188890	130189174	.	-	0	Parent=comp61767_c0_seq1.mrna1
Chr1	gffcl	locus	130191283	130191690	.	+	.	ID=RLOC_00011182;geneIDs=comp152753_c0_seq1.path1;transcripts=comp152753_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130191283	130191690	.	+	.	ID=comp152753_c0_seq1.mrna1;geneID=comp152753_c0_seq1.path1;Name=comp152753_c0_seq1;Dir=indeterminatecoverage=96.3;identity=98.8;matches=407;mismatches=1;indels=4;unknowns=0;Target=comp152753_c0_seq1 412 1 .;CDS_Target=comp152753_c0_seq1 231 151 .;locus=RLOC_00011182
Chr1	stalkie_big_nohaplotig	exon	130191283	130191690	98	+	.	Parent=comp152753_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130191429	130191509	.	+	0	Parent=comp152753_c0_seq1.mrna1
Chr1	gffcl	locus	130192873	130193243	.	-	.	ID=RLOC_00011183;geneIDs=comp135573_c0_seq1.path1;transcripts=comp135573_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130192873	130193243	.	-	.	ID=comp135573_c0_seq1.mrna1;geneID=comp135573_c0_seq1.path1;Name=comp135573_c0_seq1;Dir=indeterminatecoverage=97.1;identity=98.7;matches=366;mismatches=5;indels=0;unknowns=0;Target=comp135573_c0_seq1 382 12 .;CDS_Target=comp135573_c0_seq1 279 46 .;locus=RLOC_00011183
Chr1	stalkie_big_nohaplotig	exon	130192873	130193243	98	-	.	Parent=comp135573_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130192976	130193209	.	-	0	Parent=comp135573_c0_seq1.mrna1
Chr1	gffcl	locus	130197608	130198456	.	-	.	ID=RLOC_00011184;geneIDs=comp128592_c0_seq1.path1;transcripts=comp128592_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130197608	130198456	.	-	.	ID=comp128592_c0_seq1.mrna1;geneID=comp128592_c0_seq1.path1;Name=comp128592_c0_seq1;Dir=sensecoverage=87.5;identity=96.3;matches=678;mismatches=8;indels=18;unknowns=0;locus=RLOC_00011184
Chr1	stalkie_big_nohaplotig	exon	130197608	130197949	99	-	.	Parent=comp128592_c0_seq1.mrna1;Target=comp128592_c0_seq1 442 783 +
Chr1	stalkie_big_nohaplotig	exon	130198022	130198285	91	-	.	Parent=comp128592_c0_seq1.mrna1;Target=comp128592_c0_seq1 196 441 +
Chr1	stalkie_big_nohaplotig	exon	130198359	130198456	97	-	.	Parent=comp128592_c0_seq1.mrna1;Target=comp128592_c0_seq1 98 195 +
Chr1	stalkie_big_nohaplotig	CDS	130197924	130197949	.	-	2	Parent=comp128592_c0_seq1.mrna1;Target=comp128592_c0_seq1 442 467 +
Chr1	stalkie_big_nohaplotig	CDS	130198022	130198285	.	-	2	Parent=comp128592_c0_seq1.mrna1;Target=comp128592_c0_seq1 196 441 +
Chr1	stalkie_big_nohaplotig	CDS	130198359	130198455	.	-	0	Parent=comp128592_c0_seq1.mrna1;Target=comp128592_c0_seq1 99 195 +
Chr1	gffcl	locus	130208358	130209139	.	+	.	ID=RLOC_00011185;geneIDs=comp149057_c0_seq1.path1;transcripts=comp149057_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130208358	130209139	.	+	.	ID=comp149057_c0_seq1.mrna1;geneID=comp149057_c0_seq1.path1;Name=comp149057_c0_seq1;Dir=sensecoverage=98.1;identity=98.8;matches=648;mismatches=8;indels=0;unknowns=0;Target=comp149057_c0_seq1 139 294 +;locus=RLOC_00011185
Chr1	stalkie_big_nohaplotig	exon	130208358	130208758	98	+	.	Parent=comp149057_c0_seq1.mrna1;Target=comp149057_c0_seq1 14 414 +
Chr1	stalkie_big_nohaplotig	exon	130208885	130209139	99	+	.	Parent=comp149057_c0_seq1.mrna1;Target=comp149057_c0_seq1 415 669 +
Chr1	stalkie_big_nohaplotig	CDS	130208483	130208638	.	+	0	Parent=comp149057_c0_seq1.mrna1
Chr1	gffcl	locus	130213620	130214022	.	+	.	ID=RLOC_00011186;geneIDs=comp135753_c1_seq1.path1;transcripts=comp135753_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130213620	130214022	.	+	.	ID=comp135753_c1_seq1.mrna1;geneID=comp135753_c1_seq1.path1;Name=comp135753_c1_seq1;Dir=indeterminatecoverage=99.8;identity=99.0;matches=399;mismatches=1;indels=3;unknowns=0;Target=comp135753_c1_seq1 400 1 .;CDS_Target=comp135753_c1_seq1 400 239 .;locus=RLOC_00011186
Chr1	stalkie_big_nohaplotig	exon	130213620	130214022	99	+	.	Parent=comp135753_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130213861	130214022	.	+	0	Parent=comp135753_c1_seq1.mrna1
Chr1	gffcl	locus	130215591	130215845	.	-	.	ID=RLOC_00011187;geneIDs=comp152306_c1_seq1.path1;transcripts=comp152306_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130215591	130215845	.	-	.	ID=comp152306_c1_seq1.mrna1;geneID=comp152306_c1_seq1.path1;Name=comp152306_c1_seq1;Dir=sensecoverage=27.4;identity=100.0;matches=191;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011187
Chr1	stalkie_big_nohaplotig	exon	130215591	130215654	100	-	.	Parent=comp152306_c1_seq1.mrna1;Target=comp152306_c1_seq1 128 191 +
Chr1	stalkie_big_nohaplotig	exon	130215719	130215845	100	-	.	Parent=comp152306_c1_seq1.mrna1;Target=comp152306_c1_seq1 1 127 +
Chr1	stalkie_big_nohaplotig	CDS	130215591	130215654	.	-	2	Parent=comp152306_c1_seq1.mrna1;Target=comp152306_c1_seq1 128 191 +
Chr1	stalkie_big_nohaplotig	CDS	130215719	130215773	.	-	0	Parent=comp152306_c1_seq1.mrna1;Target=comp152306_c1_seq1 73 127 +
Chr1	gffcl	locus	130218240	130218478	.	-	.	ID=RLOC_00011188;geneIDs=comp148456_c0_seq1.path1;transcripts=comp148456_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130218240	130218478	.	-	.	ID=comp148456_c0_seq1.mrna1;geneID=comp148456_c0_seq1.path1;Name=comp148456_c0_seq1;Dir=indeterminatecoverage=88.3;identity=90.4;matches=216;mismatches=17;indels=6;unknowns=0;Target=comp148456_c0_seq1 233 1 .;CDS_Target=comp148456_c0_seq1 154 2 .;locus=RLOC_00011188
Chr1	stalkie_big_nohaplotig	exon	130218240	130218478	90	-	.	Parent=comp148456_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130218319	130218477	.	-	0	Parent=comp148456_c0_seq1.mrna1
Chr1	gffcl	locus	130219528	130220281	.	+	.	ID=RLOC_00011189;geneIDs=comp153516_c0_seq1.path1;transcripts=comp153516_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130219528	130220281	.	+	.	ID=comp153516_c0_seq1.mrna1;geneID=comp153516_c0_seq1.path1;Name=comp153516_c0_seq1;Dir=indeterminatecoverage=99.2;identity=98.1;matches=742;mismatches=12;indels=2;unknowns=0;Target=comp153516_c0_seq1 756 1 .;CDS_Target=comp153516_c0_seq1 732 541 .;locus=RLOC_00011189
Chr1	stalkie_big_nohaplotig	exon	130219528	130220281	98	+	.	Parent=comp153516_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130220066	130220257	.	+	0	Parent=comp153516_c0_seq1.mrna1
Chr1	gffcl	locus	130223856	130224227	.	+	.	ID=RLOC_00011190;geneIDs=comp143498_c0_seq1.path1;transcripts=comp143498_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130223856	130224227	.	+	.	ID=comp143498_c0_seq1.mrna1;geneID=comp143498_c0_seq1.path1;Name=comp143498_c0_seq1;Dir=sensecoverage=87.1;identity=99.7;matches=303;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011190
Chr1	stalkie_big_nohaplotig	exon	130223856	130223932	100	+	.	Parent=comp143498_c0_seq1.mrna1;Target=comp143498_c0_seq1 32 108 +
Chr1	stalkie_big_nohaplotig	exon	130224001	130224227	99	+	.	Parent=comp143498_c0_seq1.mrna1;Target=comp143498_c0_seq1 109 335 +
Chr1	stalkie_big_nohaplotig	CDS	130223878	130223932	.	+	0	Parent=comp143498_c0_seq1.mrna1;Target=comp143498_c0_seq1 54 108 +
Chr1	stalkie_big_nohaplotig	CDS	130224001	130224146	.	+	2	Parent=comp143498_c0_seq1.mrna1;Target=comp143498_c0_seq1 109 254 +
Chr1	gffcl	locus	130224204	130224795	.	-	.	ID=RLOC_00011191;geneIDs=comp149605_c0_seq1.path1;transcripts=comp149605_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130224204	130224795	.	-	.	ID=comp149605_c0_seq1.mrna1;geneID=comp149605_c0_seq1.path1;Name=comp149605_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.3;matches=542;mismatches=36;indels=3;unknowns=0;Target=comp149605_c0_seq1 281 174 .;locus=RLOC_00011191
Chr1	stalkie_big_nohaplotig	exon	130224204	130224471	95	-	.	Parent=comp149605_c0_seq1.mrna1;Target=comp149605_c0_seq1 578 311 .
Chr1	stalkie_big_nohaplotig	exon	130224483	130224795	91	-	.	Parent=comp149605_c0_seq1.mrna1;Target=comp149605_c0_seq1 310 1 .
Chr1	stalkie_big_nohaplotig	CDS	130224513	130224620	.	-	0	Parent=comp149605_c0_seq1.mrna1
Chr1	gffcl	locus	130227423	130227858	.	+	.	ID=RLOC_00011192;geneIDs=comp126481_c0_seq1.path1;transcripts=comp126481_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130227423	130227858	.	+	.	ID=comp126481_c0_seq1.mrna1;geneID=comp126481_c0_seq1.path1;Name=comp126481_c0_seq1;Dir=sensecoverage=95.3;identity=97.7;matches=339;mismatches=8;indels=0;unknowns=0;locus=RLOC_00011192
Chr1	stalkie_big_nohaplotig	exon	130227423	130227614	97	+	.	Parent=comp126481_c0_seq1.mrna1;Target=comp126481_c0_seq1 1 192 +
Chr1	stalkie_big_nohaplotig	exon	130227704	130227858	98	+	.	Parent=comp126481_c0_seq1.mrna1;Target=comp126481_c0_seq1 193 347 +
Chr1	stalkie_big_nohaplotig	CDS	130227560	130227614	.	+	0	Parent=comp126481_c0_seq1.mrna1;Target=comp126481_c0_seq1 138 192 +
Chr1	stalkie_big_nohaplotig	CDS	130227704	130227822	.	+	2	Parent=comp126481_c0_seq1.mrna1;Target=comp126481_c0_seq1 193 311 +
Chr1	gffcl	locus	130232766	130233206	.	+	.	ID=RLOC_00011193;geneIDs=comp146972_c0_seq1.path1;transcripts=comp146972_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130232766	130233206	.	+	.	ID=comp146972_c0_seq1.mrna1;geneID=comp146972_c0_seq1.path1;Name=comp146972_c0_seq1;Dir=sensecoverage=100.0;identity=97.9;matches=368;mismatches=2;indels=6;unknowns=0;Target=comp146972_c0_seq1 151 162 +;locus=RLOC_00011193
Chr1	stalkie_big_nohaplotig	exon	130232766	130232954	95	+	.	Parent=comp146972_c0_seq1.mrna1;Target=comp146972_c0_seq1 1 195 +
Chr1	stalkie_big_nohaplotig	exon	130233026	130233206	100	+	.	Parent=comp146972_c0_seq1.mrna1;Target=comp146972_c0_seq1 196 376 +
Chr1	stalkie_big_nohaplotig	CDS	130232915	130232923	.	+	0	Parent=comp146972_c0_seq1.mrna1
Chr1	gffcl	locus	130242895	130243268	.	-	.	ID=RLOC_00011194;geneIDs=comp148846_c0_seq1.path1;transcripts=comp148846_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130242895	130243268	.	-	.	ID=comp148846_c0_seq1.mrna1;geneID=comp148846_c0_seq1.path1;Name=comp148846_c0_seq1;Dir=sensecoverage=83.0;identity=97.4;matches=295;mismatches=7;indels=1;unknowns=0;locus=RLOC_00011194
Chr1	stalkie_big_nohaplotig	exon	130242895	130243142	97	-	.	Parent=comp148846_c0_seq1.mrna1;Target=comp148846_c0_seq1 77 325 +
Chr1	stalkie_big_nohaplotig	exon	130243215	130243268	98	-	.	Parent=comp148846_c0_seq1.mrna1;Target=comp148846_c0_seq1 23 76 +
Chr1	stalkie_big_nohaplotig	CDS	130243024	130243142	.	-	2	Parent=comp148846_c0_seq1.mrna1;Target=comp148846_c0_seq1 77 195 +
Chr1	stalkie_big_nohaplotig	CDS	130243215	130243266	.	-	0	Parent=comp148846_c0_seq1.mrna1;Target=comp148846_c0_seq1 25 76 +
Chr1	gffcl	locus	130250356	132169255	.	.	.	ID=RLOC_00011195;geneIDs=comp146865_c0_seq1.path1,comp164824_c0_seq1.path1;transcripts=comp146865_c0_seq1.mrna1,comp164824_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130250356	132169255	.	-	.	ID=comp146865_c0_seq1.mrna1;geneID=comp146865_c0_seq1.path1;Name=comp146865_c0_seq1;Dir=antisensecoverage=92.4;identity=89.3;matches=468;mismatches=2;indels=54;unknowns=0;Target=comp146865_c0_seq1 89 142 .;locus=RLOC_00011195
Chr1	stalkie_big_nohaplotig	exon	130250356	130250726	99	-	.	Parent=comp146865_c0_seq1.mrna1;Target=comp146865_c0_seq1 1 371 -
Chr1	stalkie_big_nohaplotig	exon	132058930	132059001	25	-	.	Parent=comp146865_c0_seq1.mrna1;Target=comp146865_c0_seq1 372 389 -
Chr1	stalkie_big_nohaplotig	exon	132059503	132059505	100	-	.	Parent=comp146865_c0_seq1.mrna1;Target=comp146865_c0_seq1 390 392 -
Chr1	stalkie_big_nohaplotig	exon	132062502	132062504	100	-	.	Parent=comp146865_c0_seq1.mrna1;Target=comp146865_c0_seq1 393 395 -
Chr1	stalkie_big_nohaplotig	exon	132069161	132069165	100	-	.	Parent=comp146865_c0_seq1.mrna1;Target=comp146865_c0_seq1 396 400 -
Chr1	stalkie_big_nohaplotig	exon	132069192	132069194	100	-	.	Parent=comp146865_c0_seq1.mrna1;Target=comp146865_c0_seq1 460 462 -
Chr1	stalkie_big_nohaplotig	exon	132071096	132071097	100	-	.	Parent=comp146865_c0_seq1.mrna1;Target=comp146865_c0_seq1 463 464 -
Chr1	stalkie_big_nohaplotig	exon	132078295	132078300	100	-	.	Parent=comp146865_c0_seq1.mrna1;Target=comp146865_c0_seq1 465 470 -
Chr1	stalkie_big_nohaplotig	exon	132083550	132083557	100	-	.	Parent=comp146865_c0_seq1.mrna1;Target=comp146865_c0_seq1 471 478 -
Chr1	stalkie_big_nohaplotig	exon	132083944	132083947	100	-	.	Parent=comp146865_c0_seq1.mrna1;Target=comp146865_c0_seq1 479 482 -
Chr1	stalkie_big_nohaplotig	exon	132123725	132123728	100	-	.	Parent=comp146865_c0_seq1.mrna1;Target=comp146865_c0_seq1 483 486 -
Chr1	stalkie_big_nohaplotig	exon	132128525	132128528	100	-	.	Parent=comp146865_c0_seq1.mrna1;Target=comp146865_c0_seq1 487 490 -
Chr1	stalkie_big_nohaplotig	exon	132130601	132130606	100	-	.	Parent=comp146865_c0_seq1.mrna1;Target=comp146865_c0_seq1 491 496 -
Chr1	stalkie_big_nohaplotig	exon	132133492	132133496	100	-	.	Parent=comp146865_c0_seq1.mrna1;Target=comp146865_c0_seq1 497 501 -
Chr1	stalkie_big_nohaplotig	exon	132149016	132149017	100	-	.	Parent=comp146865_c0_seq1.mrna1;Target=comp146865_c0_seq1 502 503 -
Chr1	stalkie_big_nohaplotig	exon	132162435	132162447	100	-	.	Parent=comp146865_c0_seq1.mrna1;Target=comp146865_c0_seq1 504 516 -
Chr1	stalkie_big_nohaplotig	exon	132168900	132168906	100	-	.	Parent=comp146865_c0_seq1.mrna1;Target=comp146865_c0_seq1 522 528 -
Chr1	stalkie_big_nohaplotig	exon	132169250	132169255	100	-	.	Parent=comp146865_c0_seq1.mrna1;Target=comp146865_c0_seq1 529 534 -
Chr1	stalkie_big_nohaplotig	CDS	130250444	130250497	.	-	0	Parent=comp146865_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130250714	130251029	.	+	.	ID=comp164824_c0_seq1.mrna1;geneID=comp164824_c0_seq1.path1;Name=comp164824_c0_seq1;Dir=indeterminatecoverage=99.4;identity=98.1;matches=311;mismatches=4;indels=2;unknowns=0;Target=comp164824_c0_seq1 316 1 .;CDS_Target=comp164824_c0_seq1 147 1 .;locus=RLOC_00011195
Chr1	stalkie_big_nohaplotig	exon	130250714	130251029	98	+	.	Parent=comp164824_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130250714	130250861	.	+	0	Parent=comp164824_c0_seq1.mrna1
Chr1	gffcl	locus	130266854	130267456	.	-	.	ID=RLOC_00011197;geneIDs=comp150613_c0_seq1.path1;transcripts=comp150613_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130266854	130267456	.	-	.	ID=comp150613_c0_seq1.mrna1;geneID=comp150613_c0_seq1.path1;Name=comp150613_c0_seq1;Dir=antisensecoverage=90.2;identity=99.1;matches=530;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011197
Chr1	stalkie_big_nohaplotig	exon	130266854	130267096	98	-	.	Parent=comp150613_c0_seq1.mrna1;Target=comp150613_c0_seq1 25 267 -
Chr1	stalkie_big_nohaplotig	exon	130267165	130267456	99	-	.	Parent=comp150613_c0_seq1.mrna1;Target=comp150613_c0_seq1 268 559 -
Chr1	stalkie_big_nohaplotig	CDS	130266951	130267096	.	-	2	Parent=comp150613_c0_seq1.mrna1;Target=comp150613_c0_seq1 122 267 .
Chr1	stalkie_big_nohaplotig	CDS	130267165	130267219	.	-	0	Parent=comp150613_c0_seq1.mrna1;Target=comp150613_c0_seq1 268 322 .
Chr1	gffcl	locus	130268505	130268978	.	-	.	ID=RLOC_00011198;geneIDs=comp147134_c0_seq1.path1;transcripts=comp147134_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130268505	130268978	.	-	.	ID=comp147134_c0_seq1.mrna1;geneID=comp147134_c0_seq1.path1;Name=comp147134_c0_seq1;Dir=sensecoverage=99.5;identity=98.3;matches=404;mismatches=6;indels=1;unknowns=0;locus=RLOC_00011198
Chr1	stalkie_big_nohaplotig	exon	130268505	130268778	97	-	.	Parent=comp147134_c0_seq1.mrna1;Target=comp147134_c0_seq1 137 411 +
Chr1	stalkie_big_nohaplotig	exon	130268843	130268978	100	-	.	Parent=comp147134_c0_seq1.mrna1;Target=comp147134_c0_seq1 1 136 +
Chr1	stalkie_big_nohaplotig	CDS	130268603	130268778	.	-	2	Parent=comp147134_c0_seq1.mrna1;Target=comp147134_c0_seq1 137 312 +
Chr1	stalkie_big_nohaplotig	CDS	130268843	130268897	.	-	0	Parent=comp147134_c0_seq1.mrna1;Target=comp147134_c0_seq1 82 136 +
Chr1	gffcl	locus	130271477	130271979	.	-	.	ID=RLOC_00011199;geneIDs=comp135153_c0_seq1.path1;transcripts=comp135153_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130271477	130271979	.	-	.	ID=comp135153_c0_seq1.mrna1;geneID=comp135153_c0_seq1.path1;Name=comp135153_c0_seq1;Dir=antisensecoverage=95.3;identity=99.6;matches=444;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011199
Chr1	stalkie_big_nohaplotig	exon	130271477	130271825	99	-	.	Parent=comp135153_c0_seq1.mrna1;Target=comp135153_c0_seq1 17 365 -
Chr1	stalkie_big_nohaplotig	exon	130271883	130271979	100	-	.	Parent=comp135153_c0_seq1.mrna1;Target=comp135153_c0_seq1 366 462 -
Chr1	stalkie_big_nohaplotig	CDS	130271575	130271825	.	-	2	Parent=comp135153_c0_seq1.mrna1;Target=comp135153_c0_seq1 115 365 .
Chr1	stalkie_big_nohaplotig	CDS	130271883	130271979	.	-	0	Parent=comp135153_c0_seq1.mrna1;Target=comp135153_c0_seq1 366 462 .
Chr1	gffcl	locus	130279352	130280320	.	.	.	ID=RLOC_00011200;geneIDs=comp148983_c0_seq1.path1,comp150927_c0_seq1.path1;transcripts=comp148983_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130279596	130280320	.	+	.	ID=comp148983_c0_seq1.mrna1;geneID=comp148983_c0_seq1.path1;Name=comp148983_c0_seq1;Dir=indeterminatecoverage=93.3;identity=98.0;matches=584;mismatches=11;indels=1;unknowns=0;locus=RLOC_00011200
Chr1	stalkie_big_nohaplotig	exon	130279596	130279896	97	+	.	Parent=comp148983_c0_seq1.mrna1;Target=comp148983_c0_seq1 343 43 .
Chr1	stalkie_big_nohaplotig	exon	130279957	130280022	95	+	.	Parent=comp148983_c0_seq1.mrna1;Target=comp148983_c0_seq1 408 344 .
Chr1	stalkie_big_nohaplotig	exon	130280092	130280320	99	+	.	Parent=comp148983_c0_seq1.mrna1;Target=comp148983_c0_seq1 637 409 .
Chr1	stalkie_big_nohaplotig	CDS	130279697	130279896	.	+	0	Parent=comp148983_c0_seq1.mrna1;Target=comp148983_c0_seq1 343 144 .
Chr1	stalkie_big_nohaplotig	CDS	130279957	130280022	.	+	1	Parent=comp148983_c0_seq1.mrna1;Target=comp148983_c0_seq1 408 344 .
Chr1	stalkie_big_nohaplotig	CDS	130280092	130280129	.	+	1	Parent=comp148983_c0_seq1.mrna1;Target=comp148983_c0_seq1 446 409 .
Chr1	gffcl	locus	130284680	130285527	.	-	.	ID=RLOC_00011201;geneIDs=comp148660_c0_seq1.path1;transcripts=comp148660_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130284680	130285527	.	-	.	ID=comp148660_c0_seq1.mrna1;geneID=comp148660_c0_seq1.path1;Name=comp148660_c0_seq1;Dir=antisensecoverage=100.0;identity=96.2;matches=763;mismatches=16;indels=14;unknowns=0;locus=RLOC_00011201
Chr1	stalkie_big_nohaplotig	exon	130284680	130285228	94	-	.	Parent=comp148660_c0_seq1.mrna1;Target=comp148660_c0_seq1 1 549 -
Chr1	stalkie_big_nohaplotig	exon	130285291	130285527	99	-	.	Parent=comp148660_c0_seq1.mrna1;Target=comp148660_c0_seq1 550 786 -
Chr1	stalkie_big_nohaplotig	CDS	130285014	130285228	.	-	2	Parent=comp148660_c0_seq1.mrna1;Target=comp148660_c0_seq1 335 549 .
Chr1	stalkie_big_nohaplotig	CDS	130285291	130285345	.	-	0	Parent=comp148660_c0_seq1.mrna1;Target=comp148660_c0_seq1 550 604 .
Chr1	gffcl	locus	130287080	130287480	.	-	.	ID=RLOC_00011202;geneIDs=comp144375_c0_seq1.path1;transcripts=comp144375_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130287080	130287480	.	-	.	ID=comp144375_c0_seq1.mrna1;geneID=comp144375_c0_seq1.path1;Name=comp144375_c0_seq1;Dir=sensecoverage=93.1;identity=97.8;matches=316;mismatches=7;indels=0;unknowns=0;locus=RLOC_00011202
Chr1	stalkie_big_nohaplotig	exon	130287080	130287324	97	-	.	Parent=comp144375_c0_seq1.mrna1;Target=comp144375_c0_seq1 79 323 +
Chr1	stalkie_big_nohaplotig	exon	130287403	130287480	100	-	.	Parent=comp144375_c0_seq1.mrna1;Target=comp144375_c0_seq1 1 78 +
Chr1	stalkie_big_nohaplotig	CDS	130287167	130287324	.	-	2	Parent=comp144375_c0_seq1.mrna1;Target=comp144375_c0_seq1 79 236 +
Chr1	stalkie_big_nohaplotig	CDS	130287403	130287478	.	-	0	Parent=comp144375_c0_seq1.mrna1;Target=comp144375_c0_seq1 3 78 +
Chr1	gffcl	locus	130290580	130291626	.	-	.	ID=RLOC_00011203;geneIDs=comp151712_c0_seq1.path1;transcripts=comp151712_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130290580	130291626	.	-	.	ID=comp151712_c0_seq1.mrna1;geneID=comp151712_c0_seq1.path1;Name=comp151712_c0_seq1;Dir=antisensecoverage=99.9;identity=98.1;matches=967;mismatches=18;indels=1;unknowns=0;locus=RLOC_00011203
Chr1	stalkie_big_nohaplotig	exon	130290580	130291448	98	-	.	Parent=comp151712_c0_seq1.mrna1;Target=comp151712_c0_seq1 2 869 -
Chr1	stalkie_big_nohaplotig	exon	130291510	130291626	95	-	.	Parent=comp151712_c0_seq1.mrna1;Target=comp151712_c0_seq1 870 986 -
Chr1	stalkie_big_nohaplotig	CDS	130291189	130291448	.	-	2	Parent=comp151712_c0_seq1.mrna1;Target=comp151712_c0_seq1 610 869 .
Chr1	stalkie_big_nohaplotig	CDS	130291510	130291564	.	-	0	Parent=comp151712_c0_seq1.mrna1;Target=comp151712_c0_seq1 870 924 .
Chr1	gffcl	locus	130293526	130294596	.	.	.	ID=RLOC_00011204;geneIDs=comp135836_c0_seq1.path1,comp143869_c0_seq1.path1;transcripts=comp143869_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130293723	130294596	.	-	.	ID=comp143869_c0_seq1.mrna1;geneID=comp143869_c0_seq1.path1;Name=comp143869_c0_seq1;Dir=antisensecoverage=95.0;identity=99.6;matches=764;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011204
Chr1	stalkie_big_nohaplotig	exon	130293723	130294178	99	-	.	Parent=comp143869_c0_seq1.mrna1;Target=comp143869_c0_seq1 41 496 -
Chr1	stalkie_big_nohaplotig	exon	130294286	130294596	100	-	.	Parent=comp143869_c0_seq1.mrna1;Target=comp143869_c0_seq1 497 807 -
Chr1	stalkie_big_nohaplotig	CDS	130293913	130294178	.	-	2	Parent=comp143869_c0_seq1.mrna1;Target=comp143869_c0_seq1 231 496 .
Chr1	stalkie_big_nohaplotig	CDS	130294286	130294340	.	-	0	Parent=comp143869_c0_seq1.mrna1;Target=comp143869_c0_seq1 497 551 .
Chr1	gffcl	locus	130296358	130297736	.	-	.	ID=RLOC_00011205;geneIDs=comp135044_c0_seq1.path1;transcripts=comp135044_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130296358	130297736	.	-	.	ID=comp135044_c0_seq1.mrna1;geneID=comp135044_c0_seq1.path1;Name=comp135044_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.2;matches=1330;mismatches=49;indels=4;unknowns=0;Target=comp135044_c0_seq1 1383 1 .;CDS_Target=comp135044_c0_seq1 812 663 .;locus=RLOC_00011205
Chr1	stalkie_big_nohaplotig	exon	130296358	130297736	96	-	.	Parent=comp135044_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130296928	130297077	.	-	0	Parent=comp135044_c0_seq1.mrna1
Chr1	gffcl	locus	130299605	130299872	.	-	.	ID=RLOC_00011206;geneIDs=comp324582_c0_seq1.path1;transcripts=comp324582_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130299605	130299872	.	-	.	ID=comp324582_c0_seq1.mrna1;geneID=comp324582_c0_seq1.path1;Name=comp324582_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=211;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011206
Chr1	stalkie_big_nohaplotig	exon	130299605	130299748	100	-	.	Parent=comp324582_c0_seq1.mrna1;Target=comp324582_c0_seq1 69 212 +
Chr1	stalkie_big_nohaplotig	exon	130299805	130299872	98	-	.	Parent=comp324582_c0_seq1.mrna1;Target=comp324582_c0_seq1 1 68 +
Chr1	stalkie_big_nohaplotig	CDS	130299615	130299748	.	-	2	Parent=comp324582_c0_seq1.mrna1;Target=comp324582_c0_seq1 69 202 +
Chr1	stalkie_big_nohaplotig	CDS	130299805	130299871	.	-	0	Parent=comp324582_c0_seq1.mrna1;Target=comp324582_c0_seq1 2 68 +
Chr1	gffcl	locus	130302042	130302430	.	-	.	ID=RLOC_00011207;geneIDs=comp143815_c0_seq1.path1;transcripts=comp143815_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130302042	130302430	.	-	.	ID=comp143815_c0_seq1.mrna1;geneID=comp143815_c0_seq1.path1;Name=comp143815_c0_seq1;Dir=sensecoverage=94.8;identity=99.1;matches=327;mismatches=2;indels=1;unknowns=0;locus=RLOC_00011207
Chr1	stalkie_big_nohaplotig	exon	130302042	130302200	100	-	.	Parent=comp143815_c0_seq1.mrna1;Target=comp143815_c0_seq1 172 330 +
Chr1	stalkie_big_nohaplotig	exon	130302261	130302430	98	-	.	Parent=comp143815_c0_seq1.mrna1;Target=comp143815_c0_seq1 1 171 +
Chr1	stalkie_big_nohaplotig	CDS	130302194	130302200	.	-	2	Parent=comp143815_c0_seq1.mrna1;Target=comp143815_c0_seq1 172 178 +
Chr1	stalkie_big_nohaplotig	CDS	130302261	130302315	.	-	0	Parent=comp143815_c0_seq1.mrna1;Target=comp143815_c0_seq1 116 171 +
Chr1	gffcl	locus	130304655	130305064	.	-	.	ID=RLOC_00011208;geneIDs=comp146308_c0_seq1.path1;transcripts=comp146308_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130304655	130305064	.	-	.	ID=comp146308_c0_seq1.mrna1;geneID=comp146308_c0_seq1.path1;Name=comp146308_c0_seq1;Dir=sensecoverage=95.3;identity=99.7;matches=346;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011208
Chr1	stalkie_big_nohaplotig	exon	130304655	130304869	100	-	.	Parent=comp146308_c0_seq1.mrna1;Target=comp146308_c0_seq1 133 347 +
Chr1	stalkie_big_nohaplotig	exon	130304933	130305064	99	-	.	Parent=comp146308_c0_seq1.mrna1;Target=comp146308_c0_seq1 1 132 +
Chr1	stalkie_big_nohaplotig	CDS	130304715	130304869	.	-	2	Parent=comp146308_c0_seq1.mrna1;Target=comp146308_c0_seq1 133 287 +
Chr1	stalkie_big_nohaplotig	CDS	130304933	130304987	.	-	0	Parent=comp146308_c0_seq1.mrna1;Target=comp146308_c0_seq1 78 132 +
Chr1	gffcl	locus	130310273	130310675	.	-	.	ID=RLOC_00011209;geneIDs=comp148185_c0_seq1.path1;transcripts=comp148185_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130310273	130310675	.	-	.	ID=comp148185_c0_seq1.mrna1;geneID=comp148185_c0_seq1.path1;Name=comp148185_c0_seq1;Dir=sensecoverage=100.0;identity=98.8;matches=340;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011209
Chr1	stalkie_big_nohaplotig	exon	130310273	130310573	98	-	.	Parent=comp148185_c0_seq1.mrna1;Target=comp148185_c0_seq1 44 344 +
Chr1	stalkie_big_nohaplotig	exon	130310633	130310675	100	-	.	Parent=comp148185_c0_seq1.mrna1;Target=comp148185_c0_seq1 1 43 +
Chr1	stalkie_big_nohaplotig	CDS	130310476	130310573	.	-	2	Parent=comp148185_c0_seq1.mrna1;Target=comp148185_c0_seq1 44 141 +
Chr1	stalkie_big_nohaplotig	CDS	130310633	130310675	.	-	0	Parent=comp148185_c0_seq1.mrna1;Target=comp148185_c0_seq1 1 43 +
Chr1	gffcl	locus	130325561	130325853	.	-	.	ID=RLOC_00011210;geneIDs=comp127067_c0_seq1.path1;transcripts=comp127067_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130325561	130325853	.	-	.	ID=comp127067_c0_seq1.mrna1;geneID=comp127067_c0_seq1.path1;Name=comp127067_c0_seq1;Dir=sensecoverage=95.6;identity=99.2;matches=237;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011210
Chr1	stalkie_big_nohaplotig	exon	130325561	130325746	99	-	.	Parent=comp127067_c0_seq1.mrna1;Target=comp127067_c0_seq1 54 239 +
Chr1	stalkie_big_nohaplotig	exon	130325801	130325853	98	-	.	Parent=comp127067_c0_seq1.mrna1;Target=comp127067_c0_seq1 1 53 +
Chr1	stalkie_big_nohaplotig	CDS	130325628	130325746	.	-	2	Parent=comp127067_c0_seq1.mrna1;Target=comp127067_c0_seq1 54 172 +
Chr1	stalkie_big_nohaplotig	CDS	130325801	130325852	.	-	0	Parent=comp127067_c0_seq1.mrna1;Target=comp127067_c0_seq1 2 53 +
Chr1	gffcl	locus	130329470	130329693	.	+	.	ID=RLOC_00011211;geneIDs=comp148069_c0_seq1.path1;transcripts=comp148069_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130329470	130329693	.	+	.	ID=comp148069_c0_seq1.mrna1;geneID=comp148069_c0_seq1.path1;Name=comp148069_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.1;matches=223;mismatches=1;indels=1;unknowns=0;Target=comp148069_c0_seq1 226 2 .;CDS_Target=comp148069_c0_seq1 226 176 .;locus=RLOC_00011211
Chr1	stalkie_big_nohaplotig	exon	130329470	130329693	99	+	.	Parent=comp148069_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130329644	130329693	.	+	0	Parent=comp148069_c0_seq1.mrna1
Chr1	gffcl	locus	130330045	130330629	.	-	.	ID=RLOC_00011212;geneIDs=comp148528_c0_seq1.path1;transcripts=comp148528_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130330045	130330629	.	-	.	ID=comp148528_c0_seq1.mrna1;geneID=comp148528_c0_seq1.path1;Name=comp148528_c0_seq1;Dir=antisensecoverage=95.2;identity=99.4;matches=513;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011212
Chr1	stalkie_big_nohaplotig	exon	130330045	130330473	99	-	.	Parent=comp148528_c0_seq1.mrna1;Target=comp148528_c0_seq1 7 435 -
Chr1	stalkie_big_nohaplotig	exon	130330543	130330629	100	-	.	Parent=comp148528_c0_seq1.mrna1;Target=comp148528_c0_seq1 436 522 -
Chr1	stalkie_big_nohaplotig	CDS	130330073	130330473	.	-	2	Parent=comp148528_c0_seq1.mrna1;Target=comp148528_c0_seq1 35 435 .
Chr1	stalkie_big_nohaplotig	CDS	130330543	130330627	.	-	0	Parent=comp148528_c0_seq1.mrna1;Target=comp148528_c0_seq1 436 520 .
Chr1	gffcl	locus	130334876	130335952	.	+	.	ID=RLOC_00011213;geneIDs=FBgn0035348.5.path1;transcripts=FBgn0035348.5.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130334876	130335952	.	+	.	ID=FBgn0035348.5.mrna1;geneID=FBgn0035348.5.path1;Name=FBgn0035348.5;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1065;mismatches=12;indels=0;unknowns=0;Target=FBgn0035348.5 1077 1 .;locus=RLOC_00011213
Chr1	stalkie_big_nohaplotig	exon	130334876	130335952	98	+	.	Parent=FBgn0035348.5.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130334876	130335952	.	+	0	Parent=FBgn0035348.5.mrna1
Chr1	gffcl	locus	130339369	130340209	.	+	.	ID=RLOC_00011214;geneIDs=comp151220_c0_seq1.path1;transcripts=comp151220_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130339369	130340209	.	+	.	ID=comp151220_c0_seq1.mrna1;geneID=comp151220_c0_seq1.path1;Name=comp151220_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=767;mismatches=18;indels=2;unknowns=0;locus=RLOC_00011214
Chr1	stalkie_big_nohaplotig	exon	130339369	130339947	97	+	.	Parent=comp151220_c0_seq1.mrna1;Target=comp151220_c0_seq1 581 1 .
Chr1	stalkie_big_nohaplotig	exon	130340004	130340209	97	+	.	Parent=comp151220_c0_seq1.mrna1;Target=comp151220_c0_seq1 787 582 .
Chr1	stalkie_big_nohaplotig	CDS	130339749	130339947	.	+	0	Parent=comp151220_c0_seq1.mrna1;Target=comp151220_c0_seq1 581 382 .
Chr1	stalkie_big_nohaplotig	CDS	130340004	130340076	.	+	2	Parent=comp151220_c0_seq1.mrna1;Target=comp151220_c0_seq1 654 582 .
Chr1	gffcl	locus	130349468	130356341	.	-	.	ID=RLOC_00011215;geneIDs=comp145885_c0_seq1.path1;transcripts=comp145885_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130349468	130356341	.	-	.	ID=comp145885_c0_seq1.mrna1;geneID=comp145885_c0_seq1.path1;Name=comp145885_c0_seq1;Dir=antisensecoverage=59.3;identity=58.8;matches=266;mismatches=48;indels=138;unknowns=0;Target=comp145885_c0_seq1 466 498 .;locus=RLOC_00011215
Chr1	stalkie_big_nohaplotig	exon	130349468	130349575	87	-	.	Parent=comp145885_c0_seq1.mrna1;Target=comp145885_c0_seq1 65 171 -
Chr1	stalkie_big_nohaplotig	exon	130356120	130356341	49	-	.	Parent=comp145885_c0_seq1.mrna1;Target=comp145885_c0_seq1 172 500 -
Chr1	stalkie_big_nohaplotig	CDS	130356307	130356339	.	-	0	Parent=comp145885_c0_seq1.mrna1
Chr1	gffcl	locus	130350185	130353865	.	-	.	ID=RLOC_00011216;geneIDs=FBgn0031110.1.path1,comp151314_c0_seq1.path1,comp151868_c0_seq1.path1;transcripts=comp151868_c0_seq1.mrna1,comp151314_c0_seq1.mrna1,FBgn0031110.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130350185	130350848	.	-	.	ID=comp151868_c0_seq1.mrna1;geneID=comp151868_c0_seq1.path1;Name=comp151868_c0_seq1;Dir=sensecoverage=100.0;identity=99.2;matches=473;mismatches=3;indels=1;unknowns=0;Target=comp151868_c0_seq1 2 88 +;locus=RLOC_00011216
Chr1	stalkie_big_nohaplotig	exon	130350185	130350257	100	-	.	Parent=comp151868_c0_seq1.mrna1;Target=comp151868_c0_seq1 405 477 +
Chr1	stalkie_big_nohaplotig	exon	130350320	130350497	99	-	.	Parent=comp151868_c0_seq1.mrna1;Target=comp151868_c0_seq1 227 404 +
Chr1	stalkie_big_nohaplotig	exon	130350556	130350689	98	-	.	Parent=comp151868_c0_seq1.mrna1;Target=comp151868_c0_seq1 93 226 +
Chr1	stalkie_big_nohaplotig	exon	130350758	130350848	98	-	.	Parent=comp151868_c0_seq1.mrna1;Target=comp151868_c0_seq1 1 92 +
Chr1	stalkie_big_nohaplotig	CDS	130350762	130350847	.	-	0	Parent=comp151868_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130350237	130353169	.	-	.	ID=comp151314_c0_seq1.mrna1;geneID=comp151314_c0_seq1.path1;Name=comp151314_c0_seq1;Dir=sensecoverage=100.0;identity=80.2;matches=307;mismatches=62;indels=14;unknowns=0;locus=RLOC_00011216
Chr1	stalkie_big_nohaplotig	exon	130350237	130350497	81	-	.	Parent=comp151314_c0_seq1.mrna1;Target=comp151314_c0_seq1 111 375 +
Chr1	stalkie_big_nohaplotig	exon	130353054	130353169	76	-	.	Parent=comp151314_c0_seq1.mrna1;Target=comp151314_c0_seq1 1 110 +
Chr1	stalkie_big_nohaplotig	CDS	130350413	130350497	.	-	1	Parent=comp151314_c0_seq1.mrna1;Target=comp151314_c0_seq1 111 195 +
Chr1	stalkie_big_nohaplotig	CDS	130353054	130353169	.	-	0	Parent=comp151314_c0_seq1.mrna1;Target=comp151314_c0_seq1 1 110 +
Chr1	stalkie_big_nohaplotig	mRNA	130352914	130353865	.	-	.	ID=FBgn0031110.1.mrna1;geneID=FBgn0031110.1.path1;Name=FBgn0031110.1;Dir=sensecoverage=100.0;identity=99.4;matches=459;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011216
Chr1	stalkie_big_nohaplotig	exon	130352914	130352995	97	-	.	Parent=FBgn0031110.1.mrna1;Target=FBgn0031110.1 381 462 +
Chr1	stalkie_big_nohaplotig	exon	130353054	130353193	100	-	.	Parent=FBgn0031110.1.mrna1;Target=FBgn0031110.1 241 380 +
Chr1	stalkie_big_nohaplotig	exon	130353284	130353372	98	-	.	Parent=FBgn0031110.1.mrna1;Target=FBgn0031110.1 152 240 +
Chr1	stalkie_big_nohaplotig	exon	130353655	130353748	100	-	.	Parent=FBgn0031110.1.mrna1;Target=FBgn0031110.1 58 151 +
Chr1	stalkie_big_nohaplotig	exon	130353809	130353865	100	-	.	Parent=FBgn0031110.1.mrna1;Target=FBgn0031110.1 1 57 +
Chr1	stalkie_big_nohaplotig	CDS	130352914	130352995	.	-	1	Parent=FBgn0031110.1.mrna1;Target=FBgn0031110.1 381 462 +
Chr1	stalkie_big_nohaplotig	CDS	130353054	130353193	.	-	0	Parent=FBgn0031110.1.mrna1;Target=FBgn0031110.1 241 380 +
Chr1	stalkie_big_nohaplotig	CDS	130353284	130353372	.	-	2	Parent=FBgn0031110.1.mrna1;Target=FBgn0031110.1 152 240 +
Chr1	stalkie_big_nohaplotig	CDS	130353655	130353748	.	-	0	Parent=FBgn0031110.1.mrna1;Target=FBgn0031110.1 58 151 +
Chr1	stalkie_big_nohaplotig	CDS	130353809	130353865	.	-	0	Parent=FBgn0031110.1.mrna1;Target=FBgn0031110.1 1 57 +
Chr1	gffcl	locus	130356807	130357194	.	-	.	ID=RLOC_00011217;geneIDs=comp143766_c0_seq1.path1;transcripts=comp143766_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130356807	130357194	.	-	.	ID=comp143766_c0_seq1.mrna1;geneID=comp143766_c0_seq1.path1;Name=comp143766_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=298;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011217
Chr1	stalkie_big_nohaplotig	exon	130356807	130357055	99	-	.	Parent=comp143766_c0_seq1.mrna1;Target=comp143766_c0_seq1 51 299 +
Chr1	stalkie_big_nohaplotig	exon	130357145	130357194	100	-	.	Parent=comp143766_c0_seq1.mrna1;Target=comp143766_c0_seq1 1 50 +
Chr1	stalkie_big_nohaplotig	CDS	130356918	130357055	.	-	0	Parent=comp143766_c0_seq1.mrna1;Target=comp143766_c0_seq1 51 188 +
Chr1	stalkie_big_nohaplotig	CDS	130357145	130357192	.	-	0	Parent=comp143766_c0_seq1.mrna1;Target=comp143766_c0_seq1 3 50 +
Chr1	gffcl	locus	130368537	130368956	.	-	.	ID=RLOC_00011218;geneIDs=comp127080_c0_seq1.path1;transcripts=comp127080_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130368537	130368956	.	-	.	ID=comp127080_c0_seq1.mrna1;geneID=comp127080_c0_seq1.path1;Name=comp127080_c0_seq1;Dir=antisensecoverage=98.9;identity=98.9;matches=347;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011218
Chr1	stalkie_big_nohaplotig	exon	130368537	130368817	98	-	.	Parent=comp127080_c0_seq1.mrna1;Target=comp127080_c0_seq1 5 285 -
Chr1	stalkie_big_nohaplotig	exon	130368887	130368956	98	-	.	Parent=comp127080_c0_seq1.mrna1;Target=comp127080_c0_seq1 286 355 -
Chr1	stalkie_big_nohaplotig	CDS	130368717	130368817	.	-	2	Parent=comp127080_c0_seq1.mrna1;Target=comp127080_c0_seq1 185 285 .
Chr1	stalkie_big_nohaplotig	CDS	130368887	130368941	.	-	0	Parent=comp127080_c0_seq1.mrna1;Target=comp127080_c0_seq1 286 340 .
Chr1	gffcl	locus	130373659	130374021	.	-	.	ID=RLOC_00011219;geneIDs=comp145424_c0_seq1.path1;transcripts=comp145424_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130373659	130374021	.	-	.	ID=comp145424_c0_seq1.mrna1;geneID=comp145424_c0_seq1.path1;Name=comp145424_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=351;mismatches=12;indels=0;unknowns=0;Target=comp145424_c0_seq1 363 1 .;CDS_Target=comp145424_c0_seq1 104 3 .;locus=RLOC_00011219
Chr1	stalkie_big_nohaplotig	exon	130373659	130374021	96	-	.	Parent=comp145424_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130373918	130374019	.	-	0	Parent=comp145424_c0_seq1.mrna1
Chr1	gffcl	locus	130374181	130374617	.	-	.	ID=RLOC_00011220;geneIDs=comp148964_c0_seq1.path1;transcripts=comp148964_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130374181	130374617	.	-	.	ID=comp148964_c0_seq1.mrna1;geneID=comp148964_c0_seq1.path1;Name=comp148964_c0_seq1;Dir=sensecoverage=83.8;identity=98.7;matches=372;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011220
Chr1	stalkie_big_nohaplotig	exon	130374181	130374424	99	-	.	Parent=comp148964_c0_seq1.mrna1;Target=comp148964_c0_seq1 134 377 +
Chr1	stalkie_big_nohaplotig	exon	130374485	130374617	97	-	.	Parent=comp148964_c0_seq1.mrna1;Target=comp148964_c0_seq1 1 133 +
Chr1	stalkie_big_nohaplotig	CDS	130374312	130374424	.	-	2	Parent=comp148964_c0_seq1.mrna1;Target=comp148964_c0_seq1 134 246 +
Chr1	stalkie_big_nohaplotig	CDS	130374485	130374539	.	-	0	Parent=comp148964_c0_seq1.mrna1;Target=comp148964_c0_seq1 79 133 +
Chr1	gffcl	locus	130385570	130385809	.	+	.	ID=RLOC_00011221;geneIDs=comp166351_c0_seq1.path1;transcripts=comp166351_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130385570	130385809	.	+	.	ID=comp166351_c0_seq1.mrna1;geneID=comp166351_c0_seq1.path1;Name=comp166351_c0_seq1;Dir=indeterminatecoverage=91.6;identity=97.9;matches=235;mismatches=4;indels=1;unknowns=0;Target=comp166351_c0_seq1 239 1 .;CDS_Target=comp166351_c0_seq1 173 3 .;locus=RLOC_00011221
Chr1	stalkie_big_nohaplotig	exon	130385570	130385809	97	+	.	Parent=comp166351_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130385572	130385743	.	+	0	Parent=comp166351_c0_seq1.mrna1
Chr1	gffcl	locus	130388257	130388742	.	-	.	ID=RLOC_00011222;geneIDs=comp143755_c0_seq1.path1;transcripts=comp143755_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130388257	130388742	.	-	.	ID=comp143755_c0_seq1.mrna1;geneID=comp143755_c0_seq1.path1;Name=comp143755_c0_seq1;Dir=sensecoverage=97.9;identity=98.8;matches=406;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011222
Chr1	stalkie_big_nohaplotig	exon	130388257	130388503	99	-	.	Parent=comp143755_c0_seq1.mrna1;Target=comp143755_c0_seq1 165 411 +
Chr1	stalkie_big_nohaplotig	exon	130388579	130388742	98	-	.	Parent=comp143755_c0_seq1.mrna1;Target=comp143755_c0_seq1 1 164 +
Chr1	stalkie_big_nohaplotig	CDS	130388406	130388503	.	-	2	Parent=comp143755_c0_seq1.mrna1;Target=comp143755_c0_seq1 165 262 +
Chr1	stalkie_big_nohaplotig	CDS	130388579	130388633	.	-	0	Parent=comp143755_c0_seq1.mrna1;Target=comp143755_c0_seq1 110 164 +
Chr1	gffcl	locus	130389324	130389870	.	-	.	ID=RLOC_00011223;geneIDs=comp151004_c0_seq1.path1;transcripts=comp151004_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130389324	130389870	.	-	.	ID=comp151004_c0_seq1.mrna1;geneID=comp151004_c0_seq1.path1;Name=comp151004_c0_seq1;Dir=sensecoverage=96.4;identity=99.2;matches=482;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011223
Chr1	stalkie_big_nohaplotig	exon	130389324	130389575	99	-	.	Parent=comp151004_c0_seq1.mrna1;Target=comp151004_c0_seq1 235 486 +
Chr1	stalkie_big_nohaplotig	exon	130389637	130389870	99	-	.	Parent=comp151004_c0_seq1.mrna1;Target=comp151004_c0_seq1 1 234 +
Chr1	stalkie_big_nohaplotig	CDS	130389460	130389575	.	-	2	Parent=comp151004_c0_seq1.mrna1;Target=comp151004_c0_seq1 235 350 +
Chr1	stalkie_big_nohaplotig	CDS	130389637	130389691	.	-	0	Parent=comp151004_c0_seq1.mrna1;Target=comp151004_c0_seq1 180 234 +
Chr1	gffcl	locus	130390281	130390796	.	-	.	ID=RLOC_00011224;geneIDs=comp146843_c0_seq1.path1;transcripts=comp146843_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130390281	130390796	.	-	.	ID=comp146843_c0_seq1.mrna1;geneID=comp146843_c0_seq1.path1;Name=comp146843_c0_seq1;Dir=sensecoverage=98.9;identity=99.1;matches=445;mismatches=3;indels=1;unknowns=0;locus=RLOC_00011224
Chr1	stalkie_big_nohaplotig	exon	130390281	130390532	100	-	.	Parent=comp146843_c0_seq1.mrna1;Target=comp146843_c0_seq1 198 449 +
Chr1	stalkie_big_nohaplotig	exon	130390601	130390796	97	-	.	Parent=comp146843_c0_seq1.mrna1;Target=comp146843_c0_seq1 1 197 +
Chr1	stalkie_big_nohaplotig	CDS	130390423	130390532	.	-	2	Parent=comp146843_c0_seq1.mrna1;Target=comp146843_c0_seq1 198 307 +
Chr1	stalkie_big_nohaplotig	CDS	130390601	130390655	.	-	0	Parent=comp146843_c0_seq1.mrna1;Target=comp146843_c0_seq1 143 197 +
Chr1	gffcl	locus	130393286	130393723	.	-	.	ID=RLOC_00011225;geneIDs=comp146454_c0_seq1.path1;transcripts=comp146454_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130393286	130393723	.	-	.	ID=comp146454_c0_seq1.mrna1;geneID=comp146454_c0_seq1.path1;Name=comp146454_c0_seq1;Dir=sensecoverage=94.9;identity=98.7;matches=367;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011225
Chr1	stalkie_big_nohaplotig	exon	130393286	130393527	97	-	.	Parent=comp146454_c0_seq1.mrna1;Target=comp146454_c0_seq1 131 372 +
Chr1	stalkie_big_nohaplotig	exon	130393594	130393723	100	-	.	Parent=comp146454_c0_seq1.mrna1;Target=comp146454_c0_seq1 1 130 +
Chr1	stalkie_big_nohaplotig	CDS	130393415	130393527	.	-	2	Parent=comp146454_c0_seq1.mrna1;Target=comp146454_c0_seq1 131 243 +
Chr1	stalkie_big_nohaplotig	CDS	130393594	130393648	.	-	0	Parent=comp146454_c0_seq1.mrna1;Target=comp146454_c0_seq1 76 130 +
Chr1	gffcl	locus	130395939	130396459	.	+	.	ID=RLOC_00011226;geneIDs=comp147019_c0_seq1.path1;transcripts=comp147019_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130395939	130396459	.	+	.	ID=comp147019_c0_seq1.mrna1;geneID=comp147019_c0_seq1.path1;Name=comp147019_c0_seq1;Dir=sensecoverage=94.6;identity=99.5;matches=381;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011226
Chr1	stalkie_big_nohaplotig	exon	130395939	130396101	99	+	.	Parent=comp147019_c0_seq1.mrna1;Target=comp147019_c0_seq1 1 163 +
Chr1	stalkie_big_nohaplotig	exon	130396240	130396459	99	+	.	Parent=comp147019_c0_seq1.mrna1;Target=comp147019_c0_seq1 164 383 +
Chr1	stalkie_big_nohaplotig	CDS	130396044	130396101	.	+	0	Parent=comp147019_c0_seq1.mrna1;Target=comp147019_c0_seq1 106 163 +
Chr1	stalkie_big_nohaplotig	CDS	130396240	130396346	.	+	2	Parent=comp147019_c0_seq1.mrna1;Target=comp147019_c0_seq1 164 270 +
Chr1	gffcl	locus	130401190	130405683	.	-	.	ID=RLOC_00011227;geneIDs=FBgn0031109.1.path1;transcripts=FBgn0031109.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130401190	130405683	.	-	.	ID=FBgn0031109.1.mrna1;geneID=FBgn0031109.1.path1;Name=FBgn0031109.1;Dir=sensecoverage=100.0;identity=98.7;matches=459;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011227
Chr1	stalkie_big_nohaplotig	exon	130401190	130401384	99	-	.	Parent=FBgn0031109.1.mrna1;Target=FBgn0031109.1 271 465 +
Chr1	stalkie_big_nohaplotig	exon	130401445	130401533	95	-	.	Parent=FBgn0031109.1.mrna1;Target=FBgn0031109.1 182 270 +
Chr1	stalkie_big_nohaplotig	exon	130402959	130403037	100	-	.	Parent=FBgn0031109.1.mrna1;Target=FBgn0031109.1 103 181 +
Chr1	stalkie_big_nohaplotig	exon	130405582	130405683	99	-	.	Parent=FBgn0031109.1.mrna1;Target=FBgn0031109.1 1 102 +
Chr1	stalkie_big_nohaplotig	CDS	130401190	130401384	.	-	0	Parent=FBgn0031109.1.mrna1;Target=FBgn0031109.1 271 465 +
Chr1	stalkie_big_nohaplotig	CDS	130401445	130401533	.	-	2	Parent=FBgn0031109.1.mrna1;Target=FBgn0031109.1 182 270 +
Chr1	stalkie_big_nohaplotig	CDS	130402959	130403037	.	-	0	Parent=FBgn0031109.1.mrna1;Target=FBgn0031109.1 103 181 +
Chr1	stalkie_big_nohaplotig	CDS	130405582	130405683	.	-	0	Parent=FBgn0031109.1.mrna1;Target=FBgn0031109.1 1 102 +
Chr1	gffcl	locus	130408595	130416363	.	+	.	ID=RLOC_00011228;geneIDs=FBgn0030434.1.path1;transcripts=FBgn0030434.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130408595	130416363	.	+	.	ID=FBgn0030434.1.mrna1;geneID=FBgn0030434.1.path1;Name=FBgn0030434.1;Dir=sensecoverage=100.0;identity=99.3;matches=763;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011228
Chr1	stalkie_big_nohaplotig	exon	130408595	130408637	97	+	.	Parent=FBgn0030434.1.mrna1;Target=FBgn0030434.1 1 43 +
Chr1	stalkie_big_nohaplotig	exon	130415464	130415664	99	+	.	Parent=FBgn0030434.1.mrna1;Target=FBgn0030434.1 44 244 +
Chr1	stalkie_big_nohaplotig	exon	130415776	130416020	100	+	.	Parent=FBgn0030434.1.mrna1;Target=FBgn0030434.1 245 489 +
Chr1	stalkie_big_nohaplotig	exon	130416085	130416363	98	+	.	Parent=FBgn0030434.1.mrna1;Target=FBgn0030434.1 490 768 +
Chr1	stalkie_big_nohaplotig	CDS	130408595	130408637	.	+	0	Parent=FBgn0030434.1.mrna1;Target=FBgn0030434.1 1 43 +
Chr1	stalkie_big_nohaplotig	CDS	130415464	130415664	.	+	2	Parent=FBgn0030434.1.mrna1;Target=FBgn0030434.1 44 244 +
Chr1	stalkie_big_nohaplotig	CDS	130415776	130416020	.	+	2	Parent=FBgn0030434.1.mrna1;Target=FBgn0030434.1 245 489 +
Chr1	stalkie_big_nohaplotig	CDS	130416085	130416363	.	+	0	Parent=FBgn0030434.1.mrna1;Target=FBgn0030434.1 490 768 +
Chr1	gffcl	locus	130416703	130417349	.	-	.	ID=RLOC_00011229;geneIDs=FBgn0030433.1.path1;transcripts=FBgn0030433.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130416703	130417349	.	-	.	ID=FBgn0030433.1.mrna1;geneID=FBgn0030433.1.path1;Name=FBgn0030433.1;Dir=sensecoverage=100.0;identity=99.3;matches=575;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011229
Chr1	stalkie_big_nohaplotig	exon	130416703	130417194	99	-	.	Parent=FBgn0030433.1.mrna1;Target=FBgn0030433.1 88 579 +
Chr1	stalkie_big_nohaplotig	exon	130417263	130417349	100	-	.	Parent=FBgn0030433.1.mrna1;Target=FBgn0030433.1 1 87 +
Chr1	stalkie_big_nohaplotig	CDS	130416703	130417194	.	-	0	Parent=FBgn0030433.1.mrna1;Target=FBgn0030433.1 88 579 +
Chr1	stalkie_big_nohaplotig	CDS	130417263	130417349	.	-	0	Parent=FBgn0030433.1.mrna1;Target=FBgn0030433.1 1 87 +
Chr1	gffcl	locus	130424519	130439112	.	+	.	ID=RLOC_00011230;geneIDs=FBgn0030432.1.path1;transcripts=FBgn0030432.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130424519	130439112	.	+	.	ID=FBgn0030432.1.mrna1;geneID=FBgn0030432.1.path1;Name=FBgn0030432.1;Dir=sensecoverage=100.0;identity=96.5;matches=1053;mismatches=2;indels=36;unknowns=0;Target=FBgn0030432.1 2 46 +;locus=RLOC_00011230
Chr1	stalkie_big_nohaplotig	exon	130424519	130424754	83	+	.	Parent=FBgn0030432.1.mrna1;Target=FBgn0030432.1 1 202 +
Chr1	stalkie_big_nohaplotig	exon	130438259	130439112	100	+	.	Parent=FBgn0030432.1.mrna1;Target=FBgn0030432.1 203 1056 +
Chr1	stalkie_big_nohaplotig	CDS	130424520	130424598	.	+	0	Parent=FBgn0030432.1.mrna1
Chr1	gffcl	locus	130425490	130425676	.	+	.	ID=RLOC_00011231;geneIDs=comp150029_c2_seq1.path1;transcripts=comp150029_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130425490	130425676	.	+	.	ID=comp150029_c2_seq1.mrna1;geneID=comp150029_c2_seq1.path1;Name=comp150029_c2_seq1;Dir=indeterminatecoverage=69.0;identity=98.9;matches=185;mismatches=2;indels=0;unknowns=0;Target=comp150029_c2_seq1 187 1 .;CDS_Target=comp150029_c2_seq1 137 3 .;locus=RLOC_00011231
Chr1	stalkie_big_nohaplotig	exon	130425490	130425676	98	+	.	Parent=comp150029_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130425492	130425626	.	+	0	Parent=comp150029_c2_seq1.mrna1
Chr1	gffcl	locus	130440428	130442768	.	+	.	ID=RLOC_00011232;geneIDs=comp163762_c3_seq1.path4;transcripts=comp163762_c3_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	130440428	130442768	.	+	.	ID=comp163762_c3_seq1.mrna4;geneID=comp163762_c3_seq1.path4;Name=comp163762_c3_seq1;Dir=indeterminatecoverage=96.1;identity=99.5;matches=2333;mismatches=7;indels=4;unknowns=0;Target=comp163762_c3_seq1 2438 96 .;CDS_Target=comp163762_c3_seq1 1857 352 .;locus=RLOC_00011232
Chr1	stalkie_big_nohaplotig	exon	130440428	130442768	99	+	.	Parent=comp163762_c3_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	130440685	130442187	.	+	0	Parent=comp163762_c3_seq1.mrna4
Chr1	gffcl	locus	130550825	130567427	.	+	.	ID=RLOC_00011234;geneIDs=FBgn0261954.1.path1,comp162148_c2_seq1.path1;transcripts=comp162148_c2_seq1.mrna1,FBgn0261954.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130550825	130567427	.	+	.	ID=comp162148_c2_seq1.mrna1;geneID=comp162148_c2_seq1.path1;Name=comp162148_c2_seq1;Dir=antisensecoverage=97.3;identity=98.1;matches=7159;mismatches=13;indels=123;unknowns=0;locus=RLOC_00011234
Chr1	stalkie_big_nohaplotig	exon	130550825	130551216	80	+	.	Parent=comp162148_c2_seq1.mrna1;Target=comp162148_c2_seq1 6790 7269 -
Chr1	stalkie_big_nohaplotig	exon	130559380	130562798	99	+	.	Parent=comp162148_c2_seq1.mrna1;Target=comp162148_c2_seq1 3389 6789 -
Chr1	stalkie_big_nohaplotig	exon	130563114	130563677	100	+	.	Parent=comp162148_c2_seq1.mrna1;Target=comp162148_c2_seq1 2825 3388 -
Chr1	stalkie_big_nohaplotig	exon	130563749	130563881	100	+	.	Parent=comp162148_c2_seq1.mrna1;Target=comp162148_c2_seq1 2692 2824 -
Chr1	stalkie_big_nohaplotig	exon	130564535	130564759	99	+	.	Parent=comp162148_c2_seq1.mrna1;Target=comp162148_c2_seq1 2467 2691 -
Chr1	stalkie_big_nohaplotig	exon	130564827	130565242	100	+	.	Parent=comp162148_c2_seq1.mrna1;Target=comp162148_c2_seq1 2051 2466 -
Chr1	stalkie_big_nohaplotig	exon	130565305	130565471	100	+	.	Parent=comp162148_c2_seq1.mrna1;Target=comp162148_c2_seq1 1884 2050 -
Chr1	stalkie_big_nohaplotig	exon	130565546	130567427	99	+	.	Parent=comp162148_c2_seq1.mrna1;Target=comp162148_c2_seq1 1 1883 -
Chr1	stalkie_big_nohaplotig	CDS	130559541	130562798	.	+	0	Parent=comp162148_c2_seq1.mrna1;Target=comp162148_c2_seq1 3389 6628 .
Chr1	stalkie_big_nohaplotig	CDS	130563114	130563677	.	+	0	Parent=comp162148_c2_seq1.mrna1;Target=comp162148_c2_seq1 2825 3388 .
Chr1	stalkie_big_nohaplotig	CDS	130563749	130563881	.	+	0	Parent=comp162148_c2_seq1.mrna1;Target=comp162148_c2_seq1 2692 2824 .
Chr1	stalkie_big_nohaplotig	CDS	130564535	130564759	.	+	2	Parent=comp162148_c2_seq1.mrna1;Target=comp162148_c2_seq1 2467 2691 .
Chr1	stalkie_big_nohaplotig	CDS	130564827	130565242	.	+	2	Parent=comp162148_c2_seq1.mrna1;Target=comp162148_c2_seq1 2051 2466 .
Chr1	stalkie_big_nohaplotig	CDS	130565305	130565471	.	+	0	Parent=comp162148_c2_seq1.mrna1;Target=comp162148_c2_seq1 1884 2050 .
Chr1	stalkie_big_nohaplotig	CDS	130565546	130566883	.	+	1	Parent=comp162148_c2_seq1.mrna1;Target=comp162148_c2_seq1 545 1883 .
Chr1	stalkie_big_nohaplotig	mRNA	130559538	130566864	.	+	.	ID=FBgn0261954.1.mrna1;geneID=FBgn0261954.1.path1;Name=FBgn0261954.1;Dir=sensecoverage=99.7;identity=99.6;matches=5934;mismatches=7;indels=18;unknowns=0;locus=RLOC_00011234
Chr1	stalkie_big_nohaplotig	exon	130559538	130562798	99	+	.	Parent=FBgn0261954.1.mrna1;Target=FBgn0261954.1 1 3243 +
Chr1	stalkie_big_nohaplotig	exon	130563114	130563677	100	+	.	Parent=FBgn0261954.1.mrna1;Target=FBgn0261954.1 3244 3807 +
Chr1	stalkie_big_nohaplotig	exon	130563749	130563755	100	+	.	Parent=FBgn0261954.1.mrna1;Target=FBgn0261954.1 3808 3814 +
Chr1	stalkie_big_nohaplotig	exon	130564535	130564759	99	+	.	Parent=FBgn0261954.1.mrna1;Target=FBgn0261954.1 3815 4039 +
Chr1	stalkie_big_nohaplotig	exon	130564827	130565242	100	+	.	Parent=FBgn0261954.1.mrna1;Target=FBgn0261954.1 4040 4455 +
Chr1	stalkie_big_nohaplotig	exon	130565305	130565471	100	+	.	Parent=FBgn0261954.1.mrna1;Target=FBgn0261954.1 4456 4622 +
Chr1	stalkie_big_nohaplotig	exon	130565546	130566864	99	+	.	Parent=FBgn0261954.1.mrna1;Target=FBgn0261954.1 4623 5941 +
Chr1	stalkie_big_nohaplotig	CDS	130559538	130562798	.	+	0	Parent=FBgn0261954.1.mrna1;Target=FBgn0261954.1 1 3243 +
Chr1	stalkie_big_nohaplotig	CDS	130563114	130563677	.	+	0	Parent=FBgn0261954.1.mrna1;Target=FBgn0261954.1 3244 3807 +
Chr1	stalkie_big_nohaplotig	CDS	130563749	130563755	.	+	0	Parent=FBgn0261954.1.mrna1;Target=FBgn0261954.1 3808 3814 +
Chr1	stalkie_big_nohaplotig	CDS	130564535	130564759	.	+	2	Parent=FBgn0261954.1.mrna1;Target=FBgn0261954.1 3815 4039 +
Chr1	stalkie_big_nohaplotig	CDS	130564827	130565242	.	+	2	Parent=FBgn0261954.1.mrna1;Target=FBgn0261954.1 4040 4455 +
Chr1	stalkie_big_nohaplotig	CDS	130565305	130565471	.	+	0	Parent=FBgn0261954.1.mrna1;Target=FBgn0261954.1 4456 4622 +
Chr1	stalkie_big_nohaplotig	CDS	130565546	130566863	.	+	1	Parent=FBgn0261954.1.mrna1;Target=FBgn0261954.1 4623 5940 +
Chr1	gffcl	locus	130574084	130576116	.	-	.	ID=RLOC_00011235;geneIDs=comp147954_c0_seq1.path1;transcripts=comp147954_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130574084	130576116	.	-	.	ID=comp147954_c0_seq1.mrna1;geneID=comp147954_c0_seq1.path1;Name=comp147954_c0_seq1;Dir=sensecoverage=97.2;identity=97.7;matches=543;mismatches=13;indels=0;unknowns=0;Target=comp147954_c0_seq1 5 37 +;locus=RLOC_00011235
Chr1	stalkie_big_nohaplotig	exon	130574084	130574240	98	-	.	Parent=comp147954_c0_seq1.mrna1;Target=comp147954_c0_seq1 403 559 +
Chr1	stalkie_big_nohaplotig	exon	130574308	130574435	97	-	.	Parent=comp147954_c0_seq1.mrna1;Target=comp147954_c0_seq1 275 402 +
Chr1	stalkie_big_nohaplotig	exon	130575754	130575842	97	-	.	Parent=comp147954_c0_seq1.mrna1;Target=comp147954_c0_seq1 186 274 +
Chr1	stalkie_big_nohaplotig	exon	130575935	130576116	96	-	.	Parent=comp147954_c0_seq1.mrna1;Target=comp147954_c0_seq1 4 185 +
Chr1	stalkie_big_nohaplotig	CDS	130576083	130576115	.	-	0	Parent=comp147954_c0_seq1.mrna1
Chr1	gffcl	locus	130578637	130580297	.	-	.	ID=RLOC_00011236;geneIDs=comp135733_c0_seq1.path1;transcripts=comp135733_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130578637	130580297	.	-	.	ID=comp135733_c0_seq1.mrna1;geneID=comp135733_c0_seq1.path1;Name=comp135733_c0_seq1;Dir=sensecoverage=99.8;identity=99.4;matches=492;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011236
Chr1	stalkie_big_nohaplotig	exon	130578637	130578735	100	-	.	Parent=comp135733_c0_seq1.mrna1;Target=comp135733_c0_seq1 398 496 +
Chr1	stalkie_big_nohaplotig	exon	130578789	130578925	100	-	.	Parent=comp135733_c0_seq1.mrna1;Target=comp135733_c0_seq1 261 397 +
Chr1	stalkie_big_nohaplotig	exon	130579919	130580010	100	-	.	Parent=comp135733_c0_seq1.mrna1;Target=comp135733_c0_seq1 169 260 +
Chr1	stalkie_big_nohaplotig	exon	130580131	130580297	98	-	.	Parent=comp135733_c0_seq1.mrna1;Target=comp135733_c0_seq1 2 168 +
Chr1	stalkie_big_nohaplotig	CDS	130578672	130578735	.	-	1	Parent=comp135733_c0_seq1.mrna1;Target=comp135733_c0_seq1 398 461 +
Chr1	stalkie_big_nohaplotig	CDS	130578789	130578925	.	-	0	Parent=comp135733_c0_seq1.mrna1;Target=comp135733_c0_seq1 261 397 +
Chr1	stalkie_big_nohaplotig	CDS	130579919	130580010	.	-	2	Parent=comp135733_c0_seq1.mrna1;Target=comp135733_c0_seq1 169 260 +
Chr1	stalkie_big_nohaplotig	CDS	130580131	130580296	.	-	0	Parent=comp135733_c0_seq1.mrna1;Target=comp135733_c0_seq1 3 168 +
Chr1	gffcl	locus	130581500	130584424	.	-	.	ID=RLOC_00011237;geneIDs=comp156556_c0_seq1.path1;transcripts=comp156556_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130581500	130584424	.	-	.	ID=comp156556_c0_seq1.mrna1;geneID=comp156556_c0_seq1.path1;Name=comp156556_c0_seq1;Dir=antisensecoverage=98.5;identity=91.4;matches=974;mismatches=10;indels=82;unknowns=0;Target=comp156556_c0_seq1 835 1080 .;locus=RLOC_00011237
Chr1	stalkie_big_nohaplotig	exon	130581500	130581800	87	-	.	Parent=comp156556_c0_seq1.mrna1;Target=comp156556_c0_seq1 16 355 -
Chr1	stalkie_big_nohaplotig	exon	130581854	130581987	100	-	.	Parent=comp156556_c0_seq1.mrna1;Target=comp156556_c0_seq1 356 489 -
Chr1	stalkie_big_nohaplotig	exon	130583876	130584424	91	-	.	Parent=comp156556_c0_seq1.mrna1;Target=comp156556_c0_seq1 490 1081 -
Chr1	stalkie_big_nohaplotig	CDS	130584178	130584423	.	-	0	Parent=comp156556_c0_seq1.mrna1
Chr1	gffcl	locus	130588318	130590358	.	-	.	ID=RLOC_00011238;geneIDs=comp148264_c0_seq1.path1;transcripts=comp148264_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130588318	130590358	.	-	.	ID=comp148264_c0_seq1.mrna1;geneID=comp148264_c0_seq1.path1;Name=comp148264_c0_seq1;Dir=antisensecoverage=90.0;identity=99.7;matches=573;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011238
Chr1	stalkie_big_nohaplotig	exon	130588318	130588486	99	-	.	Parent=comp148264_c0_seq1.mrna1;Target=comp148264_c0_seq1 39 207 -
Chr1	stalkie_big_nohaplotig	exon	130588543	130588679	99	-	.	Parent=comp148264_c0_seq1.mrna1;Target=comp148264_c0_seq1 208 344 -
Chr1	stalkie_big_nohaplotig	exon	130590006	130590094	100	-	.	Parent=comp148264_c0_seq1.mrna1;Target=comp148264_c0_seq1 345 433 -
Chr1	stalkie_big_nohaplotig	exon	130590179	130590358	100	-	.	Parent=comp148264_c0_seq1.mrna1;Target=comp148264_c0_seq1 434 613 -
Chr1	stalkie_big_nohaplotig	CDS	130588408	130588486	.	-	1	Parent=comp148264_c0_seq1.mrna1;Target=comp148264_c0_seq1 129 207 .
Chr1	stalkie_big_nohaplotig	CDS	130588543	130588679	.	-	0	Parent=comp148264_c0_seq1.mrna1;Target=comp148264_c0_seq1 208 344 .
Chr1	stalkie_big_nohaplotig	CDS	130590006	130590094	.	-	2	Parent=comp148264_c0_seq1.mrna1;Target=comp148264_c0_seq1 345 433 .
Chr1	stalkie_big_nohaplotig	CDS	130590179	130590311	.	-	0	Parent=comp148264_c0_seq1.mrna1;Target=comp148264_c0_seq1 434 566 .
Chr1	gffcl	locus	130600450	130601242	.	-	.	ID=RLOC_00011239;geneIDs=FBgn0011283.1.path1;transcripts=FBgn0011283.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130600450	130601242	.	-	.	ID=FBgn0011283.1.mrna1;geneID=FBgn0011283.1.path1;Name=FBgn0011283.1;Dir=sensecoverage=100.0;identity=99.2;matches=634;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011239
Chr1	stalkie_big_nohaplotig	exon	130600450	130600662	99	-	.	Parent=FBgn0011283.1.mrna1;Target=FBgn0011283.1 427 639 +
Chr1	stalkie_big_nohaplotig	exon	130600757	130600845	100	-	.	Parent=FBgn0011283.1.mrna1;Target=FBgn0011283.1 338 426 +
Chr1	stalkie_big_nohaplotig	exon	130600906	130601242	98	-	.	Parent=FBgn0011283.1.mrna1;Target=FBgn0011283.1 1 337 +
Chr1	stalkie_big_nohaplotig	CDS	130600450	130600662	.	-	0	Parent=FBgn0011283.1.mrna1;Target=FBgn0011283.1 427 639 +
Chr1	stalkie_big_nohaplotig	CDS	130600757	130600845	.	-	2	Parent=FBgn0011283.1.mrna1;Target=FBgn0011283.1 338 426 +
Chr1	stalkie_big_nohaplotig	CDS	130600906	130601044	.	-	0	Parent=FBgn0011283.1.mrna1;Target=FBgn0011283.1 199 337 +
Chr1	gffcl	locus	130604136	130604780	.	+	.	ID=RLOC_00011240;geneIDs=FBgn0033571.2.path1;transcripts=FBgn0033571.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130604136	130604780	.	+	.	ID=FBgn0033571.2.mrna1;geneID=FBgn0033571.2.path1;Name=FBgn0033571.2;Dir=indeterminatecoverage=100.0;identity=99.2;matches=640;mismatches=5;indels=0;unknowns=0;Target=FBgn0033571.2 645 1 .;locus=RLOC_00011240
Chr1	stalkie_big_nohaplotig	exon	130604136	130604780	99	+	.	Parent=FBgn0033571.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130604136	130604780	.	+	0	Parent=FBgn0033571.2.mrna1
Chr1	gffcl	locus	130605118	130607175	.	-	.	ID=RLOC_00011241;geneIDs=FBgn0000520.2.path1;transcripts=FBgn0000520.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130605118	130607175	.	-	.	ID=FBgn0000520.2.mrna1;geneID=FBgn0000520.2.path1;Name=FBgn0000520.2;Dir=sensecoverage=100.0;identity=99.8;matches=1875;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011241
Chr1	stalkie_big_nohaplotig	exon	130605118	130606038	99	-	.	Parent=FBgn0000520.2.mrna1;Target=FBgn0000520.2 958 1878 +
Chr1	stalkie_big_nohaplotig	exon	130606104	130606296	100	-	.	Parent=FBgn0000520.2.mrna1;Target=FBgn0000520.2 765 957 +
Chr1	stalkie_big_nohaplotig	exon	130606357	130606758	99	-	.	Parent=FBgn0000520.2.mrna1;Target=FBgn0000520.2 363 764 +
Chr1	stalkie_big_nohaplotig	exon	130606814	130607175	100	-	.	Parent=FBgn0000520.2.mrna1;Target=FBgn0000520.2 1 362 +
Chr1	stalkie_big_nohaplotig	CDS	130605118	130606038	.	-	0	Parent=FBgn0000520.2.mrna1;Target=FBgn0000520.2 958 1878 +
Chr1	stalkie_big_nohaplotig	CDS	130606104	130606296	.	-	1	Parent=FBgn0000520.2.mrna1;Target=FBgn0000520.2 765 957 +
Chr1	stalkie_big_nohaplotig	CDS	130606357	130606758	.	-	1	Parent=FBgn0000520.2.mrna1;Target=FBgn0000520.2 363 764 +
Chr1	stalkie_big_nohaplotig	CDS	130606814	130607175	.	-	0	Parent=FBgn0000520.2.mrna1;Target=FBgn0000520.2 1 362 +
Chr1	gffcl	locus	130610767	130612964	.	-	.	ID=RLOC_00011242;geneIDs=FBgn0033310.1.path1;transcripts=FBgn0033310.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130610767	130612964	.	-	.	ID=FBgn0033310.1.mrna1;geneID=FBgn0033310.1.path1;Name=FBgn0033310.1;Dir=sensecoverage=100.0;identity=99.3;matches=1886;mismatches=13;indels=0;unknowns=0;locus=RLOC_00011242
Chr1	stalkie_big_nohaplotig	exon	130610767	130611111	99	-	.	Parent=FBgn0033310.1.mrna1;Target=FBgn0033310.1 1555 1899 +
Chr1	stalkie_big_nohaplotig	exon	130611178	130611801	99	-	.	Parent=FBgn0033310.1.mrna1;Target=FBgn0033310.1 931 1554 +
Chr1	stalkie_big_nohaplotig	exon	130611861	130612217	99	-	.	Parent=FBgn0033310.1.mrna1;Target=FBgn0033310.1 574 930 +
Chr1	stalkie_big_nohaplotig	exon	130612276	130612335	100	-	.	Parent=FBgn0033310.1.mrna1;Target=FBgn0033310.1 514 573 +
Chr1	stalkie_big_nohaplotig	exon	130612393	130612551	99	-	.	Parent=FBgn0033310.1.mrna1;Target=FBgn0033310.1 355 513 +
Chr1	stalkie_big_nohaplotig	exon	130612611	130612964	98	-	.	Parent=FBgn0033310.1.mrna1;Target=FBgn0033310.1 1 354 +
Chr1	stalkie_big_nohaplotig	CDS	130610767	130611111	.	-	0	Parent=FBgn0033310.1.mrna1;Target=FBgn0033310.1 1555 1899 +
Chr1	stalkie_big_nohaplotig	CDS	130611178	130611801	.	-	0	Parent=FBgn0033310.1.mrna1;Target=FBgn0033310.1 931 1554 +
Chr1	stalkie_big_nohaplotig	CDS	130611861	130612217	.	-	0	Parent=FBgn0033310.1.mrna1;Target=FBgn0033310.1 574 930 +
Chr1	stalkie_big_nohaplotig	CDS	130612276	130612335	.	-	0	Parent=FBgn0033310.1.mrna1;Target=FBgn0033310.1 514 573 +
Chr1	stalkie_big_nohaplotig	CDS	130612393	130612551	.	-	0	Parent=FBgn0033310.1.mrna1;Target=FBgn0033310.1 355 513 +
Chr1	stalkie_big_nohaplotig	CDS	130612611	130612964	.	-	0	Parent=FBgn0033310.1.mrna1;Target=FBgn0033310.1 1 354 +
Chr1	gffcl	locus	130614977	130616339	.	+	.	ID=RLOC_00011243;geneIDs=FBgn0030263.1.path1;transcripts=FBgn0030263.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130614977	130616339	.	+	.	ID=FBgn0030263.1.mrna1;geneID=FBgn0030263.1.path1;Name=FBgn0030263.1;Dir=sensecoverage=100.0;identity=99.8;matches=1048;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011243
Chr1	stalkie_big_nohaplotig	exon	130614977	130615214	99	+	.	Parent=FBgn0030263.1.mrna1;Target=FBgn0030263.1 1 238 +
Chr1	stalkie_big_nohaplotig	exon	130615273	130615384	100	+	.	Parent=FBgn0030263.1.mrna1;Target=FBgn0030263.1 239 350 +
Chr1	stalkie_big_nohaplotig	exon	130615449	130615590	100	+	.	Parent=FBgn0030263.1.mrna1;Target=FBgn0030263.1 351 492 +
Chr1	stalkie_big_nohaplotig	exon	130615657	130615993	100	+	.	Parent=FBgn0030263.1.mrna1;Target=FBgn0030263.1 493 829 +
Chr1	stalkie_big_nohaplotig	exon	130616061	130616193	100	+	.	Parent=FBgn0030263.1.mrna1;Target=FBgn0030263.1 830 962 +
Chr1	stalkie_big_nohaplotig	exon	130616252	130616339	100	+	.	Parent=FBgn0030263.1.mrna1;Target=FBgn0030263.1 963 1050 +
Chr1	stalkie_big_nohaplotig	CDS	130614977	130615214	.	+	0	Parent=FBgn0030263.1.mrna1;Target=FBgn0030263.1 1 238 +
Chr1	stalkie_big_nohaplotig	CDS	130615273	130615384	.	+	2	Parent=FBgn0030263.1.mrna1;Target=FBgn0030263.1 239 350 +
Chr1	stalkie_big_nohaplotig	CDS	130615449	130615590	.	+	1	Parent=FBgn0030263.1.mrna1;Target=FBgn0030263.1 351 492 +
Chr1	stalkie_big_nohaplotig	CDS	130615657	130615993	.	+	0	Parent=FBgn0030263.1.mrna1;Target=FBgn0030263.1 493 829 +
Chr1	stalkie_big_nohaplotig	CDS	130616061	130616193	.	+	2	Parent=FBgn0030263.1.mrna1;Target=FBgn0030263.1 830 962 +
Chr1	stalkie_big_nohaplotig	CDS	130616252	130616339	.	+	1	Parent=FBgn0030263.1.mrna1;Target=FBgn0030263.1 963 1050 +
Chr1	gffcl	locus	130620854	130622291	.	+	.	ID=RLOC_00011244;geneIDs=FBgn0027498.1.path1;transcripts=FBgn0027498.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130620854	130622291	.	+	.	ID=FBgn0027498.1.mrna1;geneID=FBgn0027498.1.path1;Name=FBgn0027498.1;Dir=sensecoverage=100.0;identity=99.1;matches=1353;mismatches=12;indels=0;unknowns=0;locus=RLOC_00011244
Chr1	stalkie_big_nohaplotig	exon	130620854	130620935	100	+	.	Parent=FBgn0027498.1.mrna1;Target=FBgn0027498.1 1 82 +
Chr1	stalkie_big_nohaplotig	exon	130621009	130622291	99	+	.	Parent=FBgn0027498.1.mrna1;Target=FBgn0027498.1 83 1365 +
Chr1	stalkie_big_nohaplotig	CDS	130620854	130620935	.	+	0	Parent=FBgn0027498.1.mrna1;Target=FBgn0027498.1 1 82 +
Chr1	stalkie_big_nohaplotig	CDS	130621009	130622291	.	+	2	Parent=FBgn0027498.1.mrna1;Target=FBgn0027498.1 83 1365 +
Chr1	gffcl	locus	130643398	130680590	.	+	.	ID=RLOC_00011245;geneIDs=FBgn0262699.1.path1;transcripts=FBgn0262699.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130643398	130680590	.	+	.	ID=FBgn0262699.1.mrna1;geneID=FBgn0262699.1.path1;Name=FBgn0262699.1;Dir=sensecoverage=100.0;identity=99.9;matches=1451;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011245
Chr1	stalkie_big_nohaplotig	exon	130643398	130643537	100	+	.	Parent=FBgn0262699.1.mrna1;Target=FBgn0262699.1 1 140 +
Chr1	stalkie_big_nohaplotig	exon	130652925	130653177	100	+	.	Parent=FBgn0262699.1.mrna1;Target=FBgn0262699.1 141 393 +
Chr1	stalkie_big_nohaplotig	exon	130678019	130678129	100	+	.	Parent=FBgn0262699.1.mrna1;Target=FBgn0262699.1 394 504 +
Chr1	stalkie_big_nohaplotig	exon	130678194	130678316	99	+	.	Parent=FBgn0262699.1.mrna1;Target=FBgn0262699.1 505 627 +
Chr1	stalkie_big_nohaplotig	exon	130678430	130678564	100	+	.	Parent=FBgn0262699.1.mrna1;Target=FBgn0262699.1 628 762 +
Chr1	stalkie_big_nohaplotig	exon	130679901	130680590	100	+	.	Parent=FBgn0262699.1.mrna1;Target=FBgn0262699.1 763 1452 +
Chr1	stalkie_big_nohaplotig	CDS	130643398	130643537	.	+	0	Parent=FBgn0262699.1.mrna1;Target=FBgn0262699.1 1 140 +
Chr1	stalkie_big_nohaplotig	CDS	130652925	130653177	.	+	1	Parent=FBgn0262699.1.mrna1;Target=FBgn0262699.1 141 393 +
Chr1	stalkie_big_nohaplotig	CDS	130678019	130678129	.	+	0	Parent=FBgn0262699.1.mrna1;Target=FBgn0262699.1 394 504 +
Chr1	stalkie_big_nohaplotig	CDS	130678194	130678316	.	+	0	Parent=FBgn0262699.1.mrna1;Target=FBgn0262699.1 505 627 +
Chr1	stalkie_big_nohaplotig	CDS	130678430	130678564	.	+	0	Parent=FBgn0262699.1.mrna1;Target=FBgn0262699.1 628 762 +
Chr1	stalkie_big_nohaplotig	CDS	130679901	130680590	.	+	0	Parent=FBgn0262699.1.mrna1;Target=FBgn0262699.1 763 1452 +
Chr1	gffcl	locus	130686036	130700446	.	+	.	ID=RLOC_00011246;geneIDs=FBgn0259101.1.path1,FBgn0259101.2.path1;transcripts=FBgn0259101.1.mrna1,FBgn0259101.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130686036	130698821	.	+	.	ID=FBgn0259101.1.mrna1;geneID=FBgn0259101.1.path1;Name=FBgn0259101.1;Dir=sensecoverage=100.0;identity=99.3;matches=1773;mismatches=12;indels=0;unknowns=0;locus=RLOC_00011246
Chr1	stalkie_big_nohaplotig	exon	130686036	130686086	100	+	.	Parent=FBgn0259101.1.mrna1;Target=FBgn0259101.1 1 51 +
Chr1	stalkie_big_nohaplotig	exon	130686159	130686307	100	+	.	Parent=FBgn0259101.1.mrna1;Target=FBgn0259101.1 52 200 +
Chr1	stalkie_big_nohaplotig	exon	130696076	130696301	100	+	.	Parent=FBgn0259101.1.mrna1;Target=FBgn0259101.1 201 426 +
Chr1	stalkie_big_nohaplotig	exon	130696355	130696552	99	+	.	Parent=FBgn0259101.1.mrna1;Target=FBgn0259101.1 427 624 +
Chr1	stalkie_big_nohaplotig	exon	130696783	130697188	98	+	.	Parent=FBgn0259101.1.mrna1;Target=FBgn0259101.1 625 1030 +
Chr1	stalkie_big_nohaplotig	exon	130697658	130697815	99	+	.	Parent=FBgn0259101.1.mrna1;Target=FBgn0259101.1 1031 1188 +
Chr1	stalkie_big_nohaplotig	exon	130697940	130698036	98	+	.	Parent=FBgn0259101.1.mrna1;Target=FBgn0259101.1 1189 1285 +
Chr1	stalkie_big_nohaplotig	exon	130698111	130698468	98	+	.	Parent=FBgn0259101.1.mrna1;Target=FBgn0259101.1 1286 1643 +
Chr1	stalkie_big_nohaplotig	exon	130698680	130698821	100	+	.	Parent=FBgn0259101.1.mrna1;Target=FBgn0259101.1 1644 1785 +
Chr1	stalkie_big_nohaplotig	CDS	130686036	130686086	.	+	0	Parent=FBgn0259101.1.mrna1;Target=FBgn0259101.1 1 51 +
Chr1	stalkie_big_nohaplotig	CDS	130686159	130686307	.	+	0	Parent=FBgn0259101.1.mrna1;Target=FBgn0259101.1 52 200 +
Chr1	stalkie_big_nohaplotig	CDS	130696076	130696301	.	+	1	Parent=FBgn0259101.1.mrna1;Target=FBgn0259101.1 201 426 +
Chr1	stalkie_big_nohaplotig	CDS	130696355	130696552	.	+	0	Parent=FBgn0259101.1.mrna1;Target=FBgn0259101.1 427 624 +
Chr1	stalkie_big_nohaplotig	CDS	130696783	130697188	.	+	0	Parent=FBgn0259101.1.mrna1;Target=FBgn0259101.1 625 1030 +
Chr1	stalkie_big_nohaplotig	CDS	130697658	130697815	.	+	2	Parent=FBgn0259101.1.mrna1;Target=FBgn0259101.1 1031 1188 +
Chr1	stalkie_big_nohaplotig	CDS	130697940	130698036	.	+	0	Parent=FBgn0259101.1.mrna1;Target=FBgn0259101.1 1189 1285 +
Chr1	stalkie_big_nohaplotig	CDS	130698111	130698468	.	+	2	Parent=FBgn0259101.1.mrna1;Target=FBgn0259101.1 1286 1643 +
Chr1	stalkie_big_nohaplotig	CDS	130698680	130698821	.	+	1	Parent=FBgn0259101.1.mrna1;Target=FBgn0259101.1 1644 1785 +
Chr1	stalkie_big_nohaplotig	mRNA	130686036	130700446	.	+	.	ID=FBgn0259101.2.mrna1;geneID=FBgn0259101.2.path1;Name=FBgn0259101.2;Dir=sensecoverage=100.0;identity=99.0;matches=1717;mismatches=17;indels=0;unknowns=0;locus=RLOC_00011246
Chr1	stalkie_big_nohaplotig	exon	130686036	130686086	100	+	.	Parent=FBgn0259101.2.mrna1;Target=FBgn0259101.2 1 51 +
Chr1	stalkie_big_nohaplotig	exon	130686159	130686307	100	+	.	Parent=FBgn0259101.2.mrna1;Target=FBgn0259101.2 52 200 +
Chr1	stalkie_big_nohaplotig	exon	130696076	130696301	100	+	.	Parent=FBgn0259101.2.mrna1;Target=FBgn0259101.2 201 426 +
Chr1	stalkie_big_nohaplotig	exon	130696355	130696552	99	+	.	Parent=FBgn0259101.2.mrna1;Target=FBgn0259101.2 427 624 +
Chr1	stalkie_big_nohaplotig	exon	130696783	130697188	98	+	.	Parent=FBgn0259101.2.mrna1;Target=FBgn0259101.2 625 1030 +
Chr1	stalkie_big_nohaplotig	exon	130699274	130699431	98	+	.	Parent=FBgn0259101.2.mrna1;Target=FBgn0259101.2 1031 1188 +
Chr1	stalkie_big_nohaplotig	exon	130699610	130699706	100	+	.	Parent=FBgn0259101.2.mrna1;Target=FBgn0259101.2 1189 1285 +
Chr1	stalkie_big_nohaplotig	exon	130699765	130700122	97	+	.	Parent=FBgn0259101.2.mrna1;Target=FBgn0259101.2 1286 1643 +
Chr1	stalkie_big_nohaplotig	exon	130700356	130700446	100	+	.	Parent=FBgn0259101.2.mrna1;Target=FBgn0259101.2 1644 1734 +
Chr1	stalkie_big_nohaplotig	CDS	130686036	130686086	.	+	0	Parent=FBgn0259101.2.mrna1;Target=FBgn0259101.2 1 51 +
Chr1	stalkie_big_nohaplotig	CDS	130686159	130686307	.	+	0	Parent=FBgn0259101.2.mrna1;Target=FBgn0259101.2 52 200 +
Chr1	stalkie_big_nohaplotig	CDS	130696076	130696301	.	+	1	Parent=FBgn0259101.2.mrna1;Target=FBgn0259101.2 201 426 +
Chr1	stalkie_big_nohaplotig	CDS	130696355	130696552	.	+	0	Parent=FBgn0259101.2.mrna1;Target=FBgn0259101.2 427 624 +
Chr1	stalkie_big_nohaplotig	CDS	130696783	130697188	.	+	0	Parent=FBgn0259101.2.mrna1;Target=FBgn0259101.2 625 1030 +
Chr1	stalkie_big_nohaplotig	CDS	130699274	130699431	.	+	2	Parent=FBgn0259101.2.mrna1;Target=FBgn0259101.2 1031 1188 +
Chr1	stalkie_big_nohaplotig	CDS	130699610	130699706	.	+	0	Parent=FBgn0259101.2.mrna1;Target=FBgn0259101.2 1189 1285 +
Chr1	stalkie_big_nohaplotig	CDS	130699765	130700122	.	+	2	Parent=FBgn0259101.2.mrna1;Target=FBgn0259101.2 1286 1643 +
Chr1	stalkie_big_nohaplotig	CDS	130700356	130700446	.	+	1	Parent=FBgn0259101.2.mrna1;Target=FBgn0259101.2 1644 1734 +
Chr1	gffcl	locus	130732699	130738247	.	+	.	ID=RLOC_00011248;geneIDs=FBgn0037717.3.path1;transcripts=FBgn0037717.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130732699	130738247	.	+	.	ID=FBgn0037717.3.mrna1;geneID=FBgn0037717.3.path1;Name=FBgn0037717.3;Dir=sensecoverage=100.0;identity=99.7;matches=2289;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011248
Chr1	stalkie_big_nohaplotig	exon	130732699	130732866	100	+	.	Parent=FBgn0037717.3.mrna1;Target=FBgn0037717.3 1 168 +
Chr1	stalkie_big_nohaplotig	exon	130732952	130733582	99	+	.	Parent=FBgn0037717.3.mrna1;Target=FBgn0037717.3 169 799 +
Chr1	stalkie_big_nohaplotig	exon	130733662	130734222	100	+	.	Parent=FBgn0037717.3.mrna1;Target=FBgn0037717.3 800 1360 +
Chr1	stalkie_big_nohaplotig	exon	130734305	130734391	100	+	.	Parent=FBgn0037717.3.mrna1;Target=FBgn0037717.3 1361 1447 +
Chr1	stalkie_big_nohaplotig	exon	130734474	130734944	99	+	.	Parent=FBgn0037717.3.mrna1;Target=FBgn0037717.3 1448 1918 +
Chr1	stalkie_big_nohaplotig	exon	130737603	130737743	100	+	.	Parent=FBgn0037717.3.mrna1;Target=FBgn0037717.3 1919 2059 +
Chr1	stalkie_big_nohaplotig	exon	130738012	130738247	99	+	.	Parent=FBgn0037717.3.mrna1;Target=FBgn0037717.3 2060 2295 +
Chr1	stalkie_big_nohaplotig	CDS	130732699	130732866	.	+	0	Parent=FBgn0037717.3.mrna1;Target=FBgn0037717.3 1 168 +
Chr1	stalkie_big_nohaplotig	CDS	130732952	130733582	.	+	0	Parent=FBgn0037717.3.mrna1;Target=FBgn0037717.3 169 799 +
Chr1	stalkie_big_nohaplotig	CDS	130733662	130734222	.	+	2	Parent=FBgn0037717.3.mrna1;Target=FBgn0037717.3 800 1360 +
Chr1	stalkie_big_nohaplotig	CDS	130734305	130734391	.	+	2	Parent=FBgn0037717.3.mrna1;Target=FBgn0037717.3 1361 1447 +
Chr1	stalkie_big_nohaplotig	CDS	130734474	130734944	.	+	2	Parent=FBgn0037717.3.mrna1;Target=FBgn0037717.3 1448 1918 +
Chr1	stalkie_big_nohaplotig	CDS	130737603	130737743	.	+	2	Parent=FBgn0037717.3.mrna1;Target=FBgn0037717.3 1919 2059 +
Chr1	stalkie_big_nohaplotig	CDS	130738012	130738247	.	+	2	Parent=FBgn0037717.3.mrna1;Target=FBgn0037717.3 2060 2295 +
Chr1	gffcl	locus	130738346	130739399	.	+	.	ID=RLOC_00011249;geneIDs=comp159065_c0_seq1.path1;transcripts=comp159065_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130738346	130739399	.	+	.	ID=comp159065_c0_seq1.mrna1;geneID=comp159065_c0_seq1.path1;Name=comp159065_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.2;matches=1041;mismatches=9;indels=10;unknowns=0;Target=comp159065_c0_seq1 1060 5 .;CDS_Target=comp159065_c0_seq1 419 294 .;locus=RLOC_00011249
Chr1	stalkie_big_nohaplotig	exon	130738346	130739399	98	+	.	Parent=comp159065_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130738635	130738760	.	+	0	Parent=comp159065_c0_seq1.mrna1
Chr1	gffcl	locus	130740068	130740755	.	-	.	ID=RLOC_00011250;geneIDs=comp144866_c0_seq1.path1;transcripts=comp144866_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130740068	130740755	.	-	.	ID=comp144866_c0_seq1.mrna1;geneID=comp144866_c0_seq1.path1;Name=comp144866_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=683;mismatches=5;indels=1;unknowns=0;Target=comp144866_c0_seq1 689 1 .;CDS_Target=comp144866_c0_seq1 501 361 .;locus=RLOC_00011250
Chr1	stalkie_big_nohaplotig	exon	130740068	130740755	99	-	.	Parent=comp144866_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130740256	130740395	.	-	0	Parent=comp144866_c0_seq1.mrna1
Chr1	gffcl	locus	130745047	130746384	.	-	.	ID=RLOC_00011251;geneIDs=FBgn0040342.1.path1;transcripts=FBgn0040342.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130745047	130746384	.	-	.	ID=FBgn0040342.1.mrna1;geneID=FBgn0040342.1.path1;Name=FBgn0040342.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1328;mismatches=10;indels=0;unknowns=0;Target=FBgn0040342.1 1338 1 .;locus=RLOC_00011251
Chr1	stalkie_big_nohaplotig	exon	130745047	130746384	99	-	.	Parent=FBgn0040342.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130745047	130746384	.	-	0	Parent=FBgn0040342.1.mrna1
Chr1	gffcl	locus	130750484	130751579	.	+	.	ID=RLOC_00011252;geneIDs=comp153000_c0_seq1.path1;transcripts=comp153000_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130750484	130751579	.	+	.	ID=comp153000_c0_seq1.mrna1;geneID=comp153000_c0_seq1.path1;Name=comp153000_c0_seq1;Dir=indeterminatecoverage=95.7;identity=98.5;matches=1080;mismatches=16;indels=1;unknowns=0;Target=comp153000_c0_seq1 1097 1 .;CDS_Target=comp153000_c0_seq1 722 78 .;locus=RLOC_00011252
Chr1	stalkie_big_nohaplotig	exon	130750484	130751579	98	+	.	Parent=comp153000_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130750561	130751205	.	+	0	Parent=comp153000_c0_seq1.mrna1
Chr1	gffcl	locus	130753453	130754626	.	+	.	ID=RLOC_00011253;geneIDs=comp144086_c0_seq1.path1,comp150446_c0_seq1.path1;transcripts=comp144086_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130753453	130754056	.	+	.	ID=comp144086_c0_seq1.mrna1;geneID=comp144086_c0_seq1.path1;Name=comp144086_c0_seq1;Dir=antisensecoverage=92.9;identity=98.0;matches=527;mismatches=11;indels=0;unknowns=0;locus=RLOC_00011253
Chr1	stalkie_big_nohaplotig	exon	130753453	130753776	96	+	.	Parent=comp144086_c0_seq1.mrna1;Target=comp144086_c0_seq1 256 579 -
Chr1	stalkie_big_nohaplotig	exon	130753843	130754056	99	+	.	Parent=comp144086_c0_seq1.mrna1;Target=comp144086_c0_seq1 42 255 -
Chr1	stalkie_big_nohaplotig	CDS	130753722	130753776	.	+	0	Parent=comp144086_c0_seq1.mrna1;Target=comp144086_c0_seq1 256 310 .
Chr1	stalkie_big_nohaplotig	CDS	130753843	130753931	.	+	2	Parent=comp144086_c0_seq1.mrna1;Target=comp144086_c0_seq1 167 255 .
Chr1	gffcl	locus	130759678	130762663	.	+	.	ID=RLOC_00011254;geneIDs=FBgn0011276.1.path1;transcripts=FBgn0011276.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130759678	130762663	.	+	.	ID=FBgn0011276.1.mrna1;geneID=FBgn0011276.1.path1;Name=FBgn0011276.1;Dir=sensecoverage=100.0;identity=99.1;matches=925;mismatches=8;indels=0;unknowns=0;locus=RLOC_00011254
Chr1	stalkie_big_nohaplotig	exon	130759678	130759801	100	+	.	Parent=FBgn0011276.1.mrna1;Target=FBgn0011276.1 1 124 +
Chr1	stalkie_big_nohaplotig	exon	130761855	130762663	99	+	.	Parent=FBgn0011276.1.mrna1;Target=FBgn0011276.1 125 933 +
Chr1	stalkie_big_nohaplotig	CDS	130759678	130759801	.	+	0	Parent=FBgn0011276.1.mrna1;Target=FBgn0011276.1 1 124 +
Chr1	stalkie_big_nohaplotig	CDS	130761855	130762663	.	+	2	Parent=FBgn0011276.1.mrna1;Target=FBgn0011276.1 125 933 +
Chr1	gffcl	locus	130768339	130768391	.	+	.	ID=RLOC_00011255;geneIDs=comp162241_c2_seq1.path1;transcripts=comp162241_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130768339	130768391	.	+	.	ID=comp162241_c2_seq1.mrna1;geneID=comp162241_c2_seq1.path1;Name=comp162241_c2_seq1;Dir=indeterminatecoverage=3.5;identity=100.0;matches=53;mismatches=0;indels=0;unknowns=0;Target=comp162241_c2_seq1 61 9 .;locus=RLOC_00011255
Chr1	stalkie_big_nohaplotig	exon	130768339	130768391	100	+	.	Parent=comp162241_c2_seq1.mrna1
Chr1	gffcl	locus	130768994	130786488	.	-	.	ID=RLOC_00011256;geneIDs=FBgn0263997.1.path1;transcripts=FBgn0263997.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130768994	130786488	.	-	.	ID=FBgn0263997.1.mrna1;geneID=FBgn0263997.1.path1;Name=FBgn0263997.1;Dir=sensecoverage=100.0;identity=98.0;matches=696;mismatches=6;indels=8;unknowns=0;locus=RLOC_00011256
Chr1	stalkie_big_nohaplotig	exon	130768994	130769038	100	-	.	Parent=FBgn0263997.1.mrna1;Target=FBgn0263997.1 658 702 +
Chr1	stalkie_big_nohaplotig	exon	130771191	130771348	100	-	.	Parent=FBgn0263997.1.mrna1;Target=FBgn0263997.1 500 657 +
Chr1	stalkie_big_nohaplotig	exon	130785982	130786488	97	-	.	Parent=FBgn0263997.1.mrna1;Target=FBgn0263997.1 1 499 +
Chr1	stalkie_big_nohaplotig	CDS	130768994	130769038	.	-	0	Parent=FBgn0263997.1.mrna1;Target=FBgn0263997.1 658 702 +
Chr1	stalkie_big_nohaplotig	CDS	130771191	130771348	.	-	2	Parent=FBgn0263997.1.mrna1;Target=FBgn0263997.1 500 657 +
Chr1	stalkie_big_nohaplotig	CDS	130785982	130786399	.	-	0	Parent=FBgn0263997.1.mrna1;Target=FBgn0263997.1 82 499 +
Chr1	gffcl	locus	130792478	130793233	.	+	.	ID=RLOC_00011258;geneIDs=ORF3201.path1;transcripts=ORF3201.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130792478	130793233	.	+	.	ID=ORF3201.mrna1;geneID=ORF3201.path1;Name=ORF3201;Dir=indeterminatecoverage=100.0;identity=99.7;matches=754;mismatches=2;indels=0;unknowns=0;Target=ORF3201 756 1 .;locus=RLOC_00011258
Chr1	stalkie_big_nohaplotig	exon	130792478	130793233	99	+	.	Parent=ORF3201.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130792478	130793233	.	+	0	Parent=ORF3201.mrna1
Chr1	gffcl	locus	130796171	132649489	.	+	.	ID=RLOC_00011259;geneIDs=comp158340_c0_seq1.path1;transcripts=comp158340_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130796171	132649489	.	+	.	ID=comp158340_c0_seq1.mrna1;geneID=comp158340_c0_seq1.path1;Name=comp158340_c0_seq1;Dir=antisensecoverage=95.9;identity=98.1;matches=1157;mismatches=19;indels=4;unknowns=0;locus=RLOC_00011259
Chr1	stalkie_big_nohaplotig	exon	130796171	130796175	100	+	.	Parent=comp158340_c0_seq1.mrna1;Target=comp158340_c0_seq1 1176 1180 -
Chr1	stalkie_big_nohaplotig	exon	132644921	132645039	98	+	.	Parent=comp158340_c0_seq1.mrna1;Target=comp158340_c0_seq1 1057 1175 -
Chr1	stalkie_big_nohaplotig	exon	132645149	132645207	98	+	.	Parent=comp158340_c0_seq1.mrna1;Target=comp158340_c0_seq1 998 1056 -
Chr1	stalkie_big_nohaplotig	exon	132645903	132646081	94	+	.	Parent=comp158340_c0_seq1.mrna1;Target=comp158340_c0_seq1 819 997 -
Chr1	stalkie_big_nohaplotig	exon	132646390	132646510	98	+	.	Parent=comp158340_c0_seq1.mrna1;Target=comp158340_c0_seq1 698 818 -
Chr1	stalkie_big_nohaplotig	exon	132646624	132646673	94	+	.	Parent=comp158340_c0_seq1.mrna1;Target=comp158340_c0_seq1 648 697 -
Chr1	stalkie_big_nohaplotig	exon	132647616	132647689	100	+	.	Parent=comp158340_c0_seq1.mrna1;Target=comp158340_c0_seq1 574 647 -
Chr1	stalkie_big_nohaplotig	exon	132648459	132648515	96	+	.	Parent=comp158340_c0_seq1.mrna1;Target=comp158340_c0_seq1 516 573 -
Chr1	stalkie_big_nohaplotig	exon	132648594	132648624	100	+	.	Parent=comp158340_c0_seq1.mrna1;Target=comp158340_c0_seq1 485 515 -
Chr1	stalkie_big_nohaplotig	exon	132648684	132648747	95	+	.	Parent=comp158340_c0_seq1.mrna1;Target=comp158340_c0_seq1 418 484 -
Chr1	stalkie_big_nohaplotig	exon	132648803	132648881	100	+	.	Parent=comp158340_c0_seq1.mrna1;Target=comp158340_c0_seq1 339 417 -
Chr1	stalkie_big_nohaplotig	exon	132648945	132648997	98	+	.	Parent=comp158340_c0_seq1.mrna1;Target=comp158340_c0_seq1 286 338 -
Chr1	stalkie_big_nohaplotig	exon	132649141	132649332	100	+	.	Parent=comp158340_c0_seq1.mrna1;Target=comp158340_c0_seq1 94 285 -
Chr1	stalkie_big_nohaplotig	exon	132649397	132649489	100	+	.	Parent=comp158340_c0_seq1.mrna1;Target=comp158340_c0_seq1 1 93 -
Chr1	stalkie_big_nohaplotig	CDS	132648977	132648997	.	+	0	Parent=comp158340_c0_seq1.mrna1;Target=comp158340_c0_seq1 286 306 .
Chr1	stalkie_big_nohaplotig	CDS	132649141	132649332	.	+	0	Parent=comp158340_c0_seq1.mrna1;Target=comp158340_c0_seq1 94 285 .
Chr1	stalkie_big_nohaplotig	CDS	132649397	132649489	.	+	0	Parent=comp158340_c0_seq1.mrna1;Target=comp158340_c0_seq1 1 93 .
Chr1	gffcl	locus	130797480	130804779	.	-	.	ID=RLOC_00011260;geneIDs=FBgn0030189.3.path1,FBgn0030189.4.path1;transcripts=FBgn0030189.4.mrna1,FBgn0030189.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130797480	130804779	.	-	.	ID=FBgn0030189.4.mrna1;geneID=FBgn0030189.4.path1;Name=FBgn0030189.4;Dir=sensecoverage=100.0;identity=99.3;matches=1498;mismatches=11;indels=0;unknowns=0;locus=RLOC_00011260
Chr1	stalkie_big_nohaplotig	exon	130797480	130797653	99	-	.	Parent=FBgn0030189.4.mrna1;Target=FBgn0030189.4 1336 1509 +
Chr1	stalkie_big_nohaplotig	exon	130797714	130797794	96	-	.	Parent=FBgn0030189.4.mrna1;Target=FBgn0030189.4 1255 1335 +
Chr1	stalkie_big_nohaplotig	exon	130797862	130798575	99	-	.	Parent=FBgn0030189.4.mrna1;Target=FBgn0030189.4 541 1254 +
Chr1	stalkie_big_nohaplotig	exon	130798635	130798849	99	-	.	Parent=FBgn0030189.4.mrna1;Target=FBgn0030189.4 326 540 +
Chr1	stalkie_big_nohaplotig	exon	130804388	130804532	100	-	.	Parent=FBgn0030189.4.mrna1;Target=FBgn0030189.4 181 325 +
Chr1	stalkie_big_nohaplotig	exon	130804600	130804779	100	-	.	Parent=FBgn0030189.4.mrna1;Target=FBgn0030189.4 1 180 +
Chr1	stalkie_big_nohaplotig	CDS	130797480	130797653	.	-	0	Parent=FBgn0030189.4.mrna1;Target=FBgn0030189.4 1336 1509 +
Chr1	stalkie_big_nohaplotig	CDS	130797714	130797794	.	-	0	Parent=FBgn0030189.4.mrna1;Target=FBgn0030189.4 1255 1335 +
Chr1	stalkie_big_nohaplotig	CDS	130797862	130798575	.	-	0	Parent=FBgn0030189.4.mrna1;Target=FBgn0030189.4 541 1254 +
Chr1	stalkie_big_nohaplotig	CDS	130798635	130798849	.	-	2	Parent=FBgn0030189.4.mrna1;Target=FBgn0030189.4 326 540 +
Chr1	stalkie_big_nohaplotig	CDS	130804388	130804532	.	-	0	Parent=FBgn0030189.4.mrna1;Target=FBgn0030189.4 181 325 +
Chr1	stalkie_big_nohaplotig	CDS	130804600	130804779	.	-	0	Parent=FBgn0030189.4.mrna1;Target=FBgn0030189.4 1 180 +
Chr1	stalkie_big_nohaplotig	mRNA	130800520	130804779	.	-	.	ID=FBgn0030189.3.mrna1;geneID=FBgn0030189.3.path1;Name=FBgn0030189.3;Dir=sensecoverage=100.0;identity=99.4;matches=1494;mismatches=9;indels=0;unknowns=0;locus=RLOC_00011260
Chr1	stalkie_big_nohaplotig	exon	130800520	130800690	99	-	.	Parent=FBgn0030189.3.mrna1;Target=FBgn0030189.3 1333 1503 +
Chr1	stalkie_big_nohaplotig	exon	130800749	130800832	100	-	.	Parent=FBgn0030189.3.mrna1;Target=FBgn0030189.3 1249 1332 +
Chr1	stalkie_big_nohaplotig	exon	130800896	130801603	99	-	.	Parent=FBgn0030189.3.mrna1;Target=FBgn0030189.3 541 1248 +
Chr1	stalkie_big_nohaplotig	exon	130801666	130801880	99	-	.	Parent=FBgn0030189.3.mrna1;Target=FBgn0030189.3 326 540 +
Chr1	stalkie_big_nohaplotig	exon	130804388	130804532	100	-	.	Parent=FBgn0030189.3.mrna1;Target=FBgn0030189.3 181 325 +
Chr1	stalkie_big_nohaplotig	exon	130804600	130804779	100	-	.	Parent=FBgn0030189.3.mrna1;Target=FBgn0030189.3 1 180 +
Chr1	stalkie_big_nohaplotig	CDS	130800520	130800690	.	-	0	Parent=FBgn0030189.3.mrna1;Target=FBgn0030189.3 1333 1503 +
Chr1	stalkie_big_nohaplotig	CDS	130800749	130800832	.	-	0	Parent=FBgn0030189.3.mrna1;Target=FBgn0030189.3 1249 1332 +
Chr1	stalkie_big_nohaplotig	CDS	130800896	130801603	.	-	0	Parent=FBgn0030189.3.mrna1;Target=FBgn0030189.3 541 1248 +
Chr1	stalkie_big_nohaplotig	CDS	130801666	130801880	.	-	2	Parent=FBgn0030189.3.mrna1;Target=FBgn0030189.3 326 540 +
Chr1	stalkie_big_nohaplotig	CDS	130804388	130804532	.	-	0	Parent=FBgn0030189.3.mrna1;Target=FBgn0030189.3 181 325 +
Chr1	stalkie_big_nohaplotig	CDS	130804600	130804779	.	-	0	Parent=FBgn0030189.3.mrna1;Target=FBgn0030189.3 1 180 +
Chr1	gffcl	locus	130842997	130844782	.	+	.	ID=RLOC_00011261;geneIDs=ORF714.path1;transcripts=ORF714.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130842997	130844782	.	+	.	ID=ORF714.mrna1;geneID=ORF714.path1;Name=ORF714;Dir=sensecoverage=92.3;identity=99.6;matches=1377;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011261
Chr1	stalkie_big_nohaplotig	exon	130842997	130843159	99	+	.	Parent=ORF714.mrna1;Target=ORF714 1 163 +
Chr1	stalkie_big_nohaplotig	exon	130843263	130843409	100	+	.	Parent=ORF714.mrna1;Target=ORF714 164 310 +
Chr1	stalkie_big_nohaplotig	exon	130843466	130843615	99	+	.	Parent=ORF714.mrna1;Target=ORF714 311 460 +
Chr1	stalkie_big_nohaplotig	exon	130843674	130843844	100	+	.	Parent=ORF714.mrna1;Target=ORF714 461 631 +
Chr1	stalkie_big_nohaplotig	exon	130843912	130844064	100	+	.	Parent=ORF714.mrna1;Target=ORF714 632 784 +
Chr1	stalkie_big_nohaplotig	exon	130844125	130844325	100	+	.	Parent=ORF714.mrna1;Target=ORF714 785 985 +
Chr1	stalkie_big_nohaplotig	exon	130844386	130844782	99	+	.	Parent=ORF714.mrna1;Target=ORF714 986 1382 +
Chr1	stalkie_big_nohaplotig	CDS	130842997	130843159	.	+	0	Parent=ORF714.mrna1;Target=ORF714 1 163 +
Chr1	stalkie_big_nohaplotig	CDS	130843263	130843409	.	+	2	Parent=ORF714.mrna1;Target=ORF714 164 310 +
Chr1	stalkie_big_nohaplotig	CDS	130843466	130843615	.	+	2	Parent=ORF714.mrna1;Target=ORF714 311 460 +
Chr1	stalkie_big_nohaplotig	CDS	130843674	130843844	.	+	2	Parent=ORF714.mrna1;Target=ORF714 461 631 +
Chr1	stalkie_big_nohaplotig	CDS	130843912	130844064	.	+	2	Parent=ORF714.mrna1;Target=ORF714 632 784 +
Chr1	stalkie_big_nohaplotig	CDS	130844125	130844325	.	+	2	Parent=ORF714.mrna1;Target=ORF714 785 985 +
Chr1	stalkie_big_nohaplotig	CDS	130844386	130844780	.	+	2	Parent=ORF714.mrna1;Target=ORF714 986 1380 +
Chr1	gffcl	locus	130845126	130845453	.	+	.	ID=RLOC_00011262;geneIDs=comp83338_c0_seq1.path1;transcripts=comp83338_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130845126	130845453	.	+	.	ID=comp83338_c0_seq1.mrna1;geneID=comp83338_c0_seq1.path1;Name=comp83338_c0_seq1;Dir=indeterminatecoverage=91.1;identity=99.4;matches=326;mismatches=2;indels=0;unknowns=0;Target=comp83338_c0_seq1 360 33 .;CDS_Target=comp83338_c0_seq1 360 34 .;locus=RLOC_00011262
Chr1	stalkie_big_nohaplotig	exon	130845126	130845453	99	+	.	Parent=comp83338_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130845127	130845453	.	+	0	Parent=comp83338_c0_seq1.mrna1
Chr1	gffcl	locus	130874556	130875431	.	+	.	ID=RLOC_00011263;geneIDs=Dv_FBgn0204872.1.path1;transcripts=Dv_FBgn0204872.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130874556	130875431	.	+	.	ID=Dv_FBgn0204872.1.mrna1;geneID=Dv_FBgn0204872.1.path1;Name=Dv_FBgn0204872.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=873;mismatches=3;indels=0;unknowns=0;Target=Dv_FBgn0204872.1 876 1 .;locus=RLOC_00011263
Chr1	stalkie_big_nohaplotig	exon	130874556	130875431	99	+	.	Parent=Dv_FBgn0204872.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130874556	130875431	.	+	0	Parent=Dv_FBgn0204872.1.mrna1
Chr1	gffcl	locus	130881244	130883572	.	-	.	ID=RLOC_00011264;geneIDs=comp159295_c1_seq1.path1;transcripts=comp159295_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130881244	130883572	.	-	.	ID=comp159295_c1_seq1.mrna1;geneID=comp159295_c1_seq1.path1;Name=comp159295_c1_seq1;Dir=sensecoverage=97.6;identity=95.1;matches=1489;mismatches=29;indels=47;unknowns=0;locus=RLOC_00011264
Chr1	stalkie_big_nohaplotig	exon	130881244	130881877	97	-	.	Parent=comp159295_c1_seq1.mrna1;Target=comp159295_c1_seq1 890 1519 +
Chr1	stalkie_big_nohaplotig	exon	130881941	130882294	98	-	.	Parent=comp159295_c1_seq1.mrna1;Target=comp159295_c1_seq1 535 889 +
Chr1	stalkie_big_nohaplotig	exon	130882416	130882650	100	-	.	Parent=comp159295_c1_seq1.mrna1;Target=comp159295_c1_seq1 300 534 +
Chr1	stalkie_big_nohaplotig	exon	130883054	130883173	99	-	.	Parent=comp159295_c1_seq1.mrna1;Target=comp159295_c1_seq1 180 299 +
Chr1	stalkie_big_nohaplotig	exon	130883352	130883572	74	-	.	Parent=comp159295_c1_seq1.mrna1;Target=comp159295_c1_seq1 1 179 +
Chr1	stalkie_big_nohaplotig	CDS	130882101	130882294	.	-	0	Parent=comp159295_c1_seq1.mrna1;Target=comp159295_c1_seq1 535 729 +
Chr1	stalkie_big_nohaplotig	CDS	130882416	130882592	.	-	0	Parent=comp159295_c1_seq1.mrna1;Target=comp159295_c1_seq1 358 534 +
Chr1	gffcl	locus	130900620	130901470	.	+	.	ID=RLOC_00011265;geneIDs=comp155460_c0_seq1.path1;transcripts=comp155460_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130900620	130901470	.	+	.	ID=comp155460_c0_seq1.mrna1;geneID=comp155460_c0_seq1.path1;Name=comp155460_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=832;mismatches=19;indels=6;unknowns=0;Target=comp155460_c0_seq1 857 1 .;CDS_Target=comp155460_c0_seq1 382 296 .;locus=RLOC_00011265
Chr1	stalkie_big_nohaplotig	exon	130900620	130901470	97	+	.	Parent=comp155460_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130900909	130900995	.	+	0	Parent=comp155460_c0_seq1.mrna1
Chr1	gffcl	locus	130907389	130908505	.	-	.	ID=RLOC_00011266;geneIDs=ORF1577.path1;transcripts=ORF1577.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130907389	130908505	.	-	.	ID=ORF1577.mrna1;geneID=ORF1577.path1;Name=ORF1577;Dir=sensecoverage=100.0;identity=98.5;matches=1043;mismatches=13;indels=3;unknowns=0;locus=RLOC_00011266
Chr1	stalkie_big_nohaplotig	exon	130907389	130908371	98	-	.	Parent=ORF1577.mrna1;Target=ORF1577 77 1056 +
Chr1	stalkie_big_nohaplotig	exon	130908430	130908505	98	-	.	Parent=ORF1577.mrna1;Target=ORF1577 1 76 +
Chr1	stalkie_big_nohaplotig	CDS	130907389	130908371	.	-	2	Parent=ORF1577.mrna1;Target=ORF1577 77 1056 +
Chr1	stalkie_big_nohaplotig	CDS	130908430	130908505	.	-	0	Parent=ORF1577.mrna1;Target=ORF1577 1 76 +
Chr1	gffcl	locus	130914698	130915601	.	-	.	ID=RLOC_00011267;geneIDs=ORF2601.path1;transcripts=ORF2601.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130914698	130915601	.	-	.	ID=ORF2601.mrna1;geneID=ORF2601.path1;Name=ORF2601;Dir=sensecoverage=100.0;identity=99.5;matches=830;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011267
Chr1	stalkie_big_nohaplotig	exon	130914698	130915464	99	-	.	Parent=ORF2601.mrna1;Target=ORF2601 68 834 +
Chr1	stalkie_big_nohaplotig	exon	130915535	130915601	100	-	.	Parent=ORF2601.mrna1;Target=ORF2601 1 67 +
Chr1	stalkie_big_nohaplotig	CDS	130914698	130915464	.	-	2	Parent=ORF2601.mrna1;Target=ORF2601 68 834 +
Chr1	stalkie_big_nohaplotig	CDS	130915535	130915601	.	-	0	Parent=ORF2601.mrna1;Target=ORF2601 1 67 +
Chr1	gffcl	locus	130919395	130919828	.	+	.	ID=RLOC_00011268;geneIDs=comp149024_c0_seq1.path1;transcripts=comp149024_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130919395	130919828	.	+	.	ID=comp149024_c0_seq1.mrna1;geneID=comp149024_c0_seq1.path1;Name=comp149024_c0_seq1;Dir=sensecoverage=96.9;identity=98.7;matches=370;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011268
Chr1	stalkie_big_nohaplotig	exon	130919395	130919476	97	+	.	Parent=comp149024_c0_seq1.mrna1;Target=comp149024_c0_seq1 13 94 +
Chr1	stalkie_big_nohaplotig	exon	130919536	130919828	98	+	.	Parent=comp149024_c0_seq1.mrna1;Target=comp149024_c0_seq1 95 387 +
Chr1	stalkie_big_nohaplotig	CDS	130919437	130919476	.	+	0	Parent=comp149024_c0_seq1.mrna1;Target=comp149024_c0_seq1 55 94 +
Chr1	stalkie_big_nohaplotig	CDS	130919536	130919630	.	+	2	Parent=comp149024_c0_seq1.mrna1;Target=comp149024_c0_seq1 95 189 +
Chr1	gffcl	locus	130930590	130930938	.	-	.	ID=RLOC_00011269;geneIDs=comp1448854_c0_seq1.path1;transcripts=comp1448854_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	130930590	130930938	.	-	.	ID=comp1448854_c0_seq1.mrna1;geneID=comp1448854_c0_seq1.path1;Name=comp1448854_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=345;mismatches=4;indels=0;unknowns=0;Target=comp1448854_c0_seq1 349 1 .;CDS_Target=comp1448854_c0_seq1 188 3 .;locus=RLOC_00011269
Chr1	stalkie_big_nohaplotig	exon	130930590	130930938	98	-	.	Parent=comp1448854_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	130930751	130930936	.	-	0	Parent=comp1448854_c0_seq1.mrna1
Chr1	gffcl	locus	131052342	131058300	.	-	.	ID=RLOC_00011270;geneIDs=FBgn0002707.1.path1;transcripts=FBgn0002707.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131052342	131058300	.	-	.	ID=FBgn0002707.1.mrna1;geneID=FBgn0002707.1.path1;Name=FBgn0002707.1;Dir=sensecoverage=100.0;identity=99.1;matches=3005;mismatches=25;indels=3;unknowns=0;locus=RLOC_00011270
Chr1	stalkie_big_nohaplotig	exon	131052342	131052539	100	-	.	Parent=FBgn0002707.1.mrna1;Target=FBgn0002707.1 2836 3033 +
Chr1	stalkie_big_nohaplotig	exon	131052607	131053122	99	-	.	Parent=FBgn0002707.1.mrna1;Target=FBgn0002707.1 2320 2835 +
Chr1	stalkie_big_nohaplotig	exon	131054577	131054813	100	-	.	Parent=FBgn0002707.1.mrna1;Target=FBgn0002707.1 2083 2319 +
Chr1	stalkie_big_nohaplotig	exon	131054875	131055198	98	-	.	Parent=FBgn0002707.1.mrna1;Target=FBgn0002707.1 1759 2082 +
Chr1	stalkie_big_nohaplotig	exon	131056316	131056884	98	-	.	Parent=FBgn0002707.1.mrna1;Target=FBgn0002707.1 1187 1758 +
Chr1	stalkie_big_nohaplotig	exon	131056944	131057098	98	-	.	Parent=FBgn0002707.1.mrna1;Target=FBgn0002707.1 1032 1186 +
Chr1	stalkie_big_nohaplotig	exon	131057160	131057756	99	-	.	Parent=FBgn0002707.1.mrna1;Target=FBgn0002707.1 435 1031 +
Chr1	stalkie_big_nohaplotig	exon	131057813	131057974	96	-	.	Parent=FBgn0002707.1.mrna1;Target=FBgn0002707.1 273 434 +
Chr1	stalkie_big_nohaplotig	exon	131058029	131058300	99	-	.	Parent=FBgn0002707.1.mrna1;Target=FBgn0002707.1 1 272 +
Chr1	stalkie_big_nohaplotig	CDS	131052342	131052539	.	-	0	Parent=FBgn0002707.1.mrna1;Target=FBgn0002707.1 2836 3033 +
Chr1	stalkie_big_nohaplotig	CDS	131052607	131053122	.	-	0	Parent=FBgn0002707.1.mrna1;Target=FBgn0002707.1 2320 2835 +
Chr1	stalkie_big_nohaplotig	CDS	131054577	131054813	.	-	0	Parent=FBgn0002707.1.mrna1;Target=FBgn0002707.1 2083 2319 +
Chr1	stalkie_big_nohaplotig	CDS	131054875	131055198	.	-	0	Parent=FBgn0002707.1.mrna1;Target=FBgn0002707.1 1759 2082 +
Chr1	stalkie_big_nohaplotig	CDS	131056316	131056884	.	-	2	Parent=FBgn0002707.1.mrna1;Target=FBgn0002707.1 1187 1758 +
Chr1	stalkie_big_nohaplotig	CDS	131056944	131057098	.	-	1	Parent=FBgn0002707.1.mrna1;Target=FBgn0002707.1 1032 1186 +
Chr1	stalkie_big_nohaplotig	CDS	131057160	131057756	.	-	1	Parent=FBgn0002707.1.mrna1;Target=FBgn0002707.1 435 1031 +
Chr1	stalkie_big_nohaplotig	CDS	131057813	131057974	.	-	1	Parent=FBgn0002707.1.mrna1;Target=FBgn0002707.1 273 434 +
Chr1	stalkie_big_nohaplotig	CDS	131058029	131058300	.	-	0	Parent=FBgn0002707.1.mrna1;Target=FBgn0002707.1 1 272 +
Chr1	gffcl	locus	131060503	131062616	.	+	.	ID=RLOC_00011271;geneIDs=ORF282.path1;transcripts=ORF282.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131060503	131062616	.	+	.	ID=ORF282.mrna1;geneID=ORF282.path1;Name=ORF282;Dir=indeterminatecoverage=99.1;identity=97.9;matches=2094;mismatches=20;indels=24;unknowns=0;Target=ORF282 2157 20 .;CDS_Target=ORF282 2157 22 .;locus=RLOC_00011271
Chr1	stalkie_big_nohaplotig	exon	131060503	131062616	97	+	.	Parent=ORF282.mrna1
Chr1	stalkie_big_nohaplotig	CDS	131060505	131062616	.	+	0	Parent=ORF282.mrna1
Chr1	gffcl	locus	131064915	131066504	.	+	.	ID=RLOC_00011272;geneIDs=comp162736_c0_seq1.path1;transcripts=comp162736_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131064915	131066504	.	+	.	ID=comp162736_c0_seq1.mrna1;geneID=comp162736_c0_seq1.path1;Name=comp162736_c0_seq1;Dir=indeterminatecoverage=99.1;identity=93.7;matches=1499;mismatches=88;indels=13;unknowns=0;Target=comp162736_c0_seq1 1608 12 .;CDS_Target=comp162736_c0_seq1 1537 143 .;locus=RLOC_00011272
Chr1	stalkie_big_nohaplotig	exon	131064915	131066504	93	+	.	Parent=comp162736_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	131065045	131066433	.	+	0	Parent=comp162736_c0_seq1.mrna1
Chr1	gffcl	locus	131068471	131070741	.	+	.	ID=RLOC_00011273;geneIDs=ORF249.path1;transcripts=ORF249.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131068471	131070741	.	+	.	ID=ORF249.mrna1;geneID=ORF249.path1;Name=ORF249;Dir=indeterminatecoverage=100.0;identity=98.3;matches=2232;mismatches=39;indels=0;unknowns=0;Target=ORF249 2271 1 .;locus=RLOC_00011273
Chr1	stalkie_big_nohaplotig	exon	131068471	131070741	98	+	.	Parent=ORF249.mrna1
Chr1	stalkie_big_nohaplotig	CDS	131068471	131070741	.	+	0	Parent=ORF249.mrna1
Chr1	gffcl	locus	131073351	131178205	.	-	.	ID=RLOC_00011274;geneIDs=comp149401_c1_seq1.path1,comp157056_c1_seq1.path1;transcripts=comp157056_c1_seq1.mrna1,comp149401_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131073351	131178205	.	-	.	ID=comp157056_c1_seq1.mrna1;geneID=comp157056_c1_seq1.path1;Name=comp157056_c1_seq1;Dir=sensecoverage=67.3;identity=93.6;matches=1667;mismatches=55;indels=59;unknowns=0;Target=comp157056_c1_seq1 1703 2008 +;locus=RLOC_00011274
Chr1	stalkie_big_nohaplotig	exon	131073351	131073748	98	-	.	Parent=comp157056_c1_seq1.mrna1;Target=comp157056_c1_seq1 2248 2649 +
Chr1	stalkie_big_nohaplotig	exon	131074058	131074096	97	-	.	Parent=comp157056_c1_seq1.mrna1;Target=comp157056_c1_seq1 2209 2247 +
Chr1	stalkie_big_nohaplotig	exon	131074531	131074671	98	-	.	Parent=comp157056_c1_seq1.mrna1;Target=comp157056_c1_seq1 2068 2208 +
Chr1	stalkie_big_nohaplotig	exon	131074756	131075710	97	-	.	Parent=comp157056_c1_seq1.mrna1;Target=comp157056_c1_seq1 1113 2067 +
Chr1	stalkie_big_nohaplotig	exon	131084869	131084912	60	-	.	Parent=comp157056_c1_seq1.mrna1;Target=comp157056_c1_seq1 1052 1103 +
Chr1	stalkie_big_nohaplotig	exon	131092938	131092943	100	-	.	Parent=comp157056_c1_seq1.mrna1;Target=comp157056_c1_seq1 1046 1051 +
Chr1	stalkie_big_nohaplotig	exon	131095942	131095950	88	-	.	Parent=comp157056_c1_seq1.mrna1;Target=comp157056_c1_seq1 1037 1045 +
Chr1	stalkie_big_nohaplotig	exon	131096870	131096884	38	-	.	Parent=comp157056_c1_seq1.mrna1;Target=comp157056_c1_seq1 1000 1035 +
Chr1	stalkie_big_nohaplotig	exon	131099809	131099858	49	-	.	Parent=comp157056_c1_seq1.mrna1;Target=comp157056_c1_seq1 940 999 +
Chr1	stalkie_big_nohaplotig	exon	131103142	131103149	100	-	.	Parent=comp157056_c1_seq1.mrna1;Target=comp157056_c1_seq1 932 939 +
Chr1	stalkie_big_nohaplotig	exon	131111227	131111236	100	-	.	Parent=comp157056_c1_seq1.mrna1;Target=comp157056_c1_seq1 922 931 +
Chr1	stalkie_big_nohaplotig	exon	131114270	131114276	100	-	.	Parent=comp157056_c1_seq1.mrna1;Target=comp157056_c1_seq1 915 921 +
Chr1	stalkie_big_nohaplotig	exon	131115719	131115726	100	-	.	Parent=comp157056_c1_seq1.mrna1;Target=comp157056_c1_seq1 907 914 +
Chr1	stalkie_big_nohaplotig	exon	131120342	131120365	72	-	.	Parent=comp157056_c1_seq1.mrna1;Target=comp157056_c1_seq1 879 906 +
Chr1	stalkie_big_nohaplotig	exon	131159803	131159805	100	-	.	Parent=comp157056_c1_seq1.mrna1;Target=comp157056_c1_seq1 876 878 +
Chr1	stalkie_big_nohaplotig	exon	131167824	131167828	100	-	.	Parent=comp157056_c1_seq1.mrna1;Target=comp157056_c1_seq1 871 875 +
Chr1	stalkie_big_nohaplotig	exon	131170042	131170043	100	-	.	Parent=comp157056_c1_seq1.mrna1;Target=comp157056_c1_seq1 869 870 +
Chr1	stalkie_big_nohaplotig	exon	131178203	131178205	100	-	.	Parent=comp157056_c1_seq1.mrna1;Target=comp157056_c1_seq1 866 868 +
Chr1	stalkie_big_nohaplotig	CDS	131074815	131075119	.	-	0	Parent=comp157056_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131096196	131097331	.	-	.	ID=comp149401_c1_seq1.mrna1;geneID=comp149401_c1_seq1.path1;Name=comp149401_c1_seq1;Dir=sensecoverage=95.6;identity=99.0;matches=600;mismatches=6;indels=0;unknowns=0;Target=comp149401_c1_seq1 274 435 +;locus=RLOC_00011274
Chr1	stalkie_big_nohaplotig	exon	131096196	131096309	96	-	.	Parent=comp149401_c1_seq1.mrna1;Target=comp149401_c1_seq1 514 627 +
Chr1	stalkie_big_nohaplotig	exon	131096840	131097331	99	-	.	Parent=comp149401_c1_seq1.mrna1;Target=comp149401_c1_seq1 22 513 +
Chr1	stalkie_big_nohaplotig	CDS	131096918	131097079	.	-	0	Parent=comp149401_c1_seq1.mrna1
Chr1	gffcl	locus	131080292	131082451	.	+	.	ID=RLOC_00011275;geneIDs=FBgn0029704.1.path1;transcripts=FBgn0029704.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131080292	131082451	.	+	.	ID=FBgn0029704.1.mrna1;geneID=FBgn0029704.1.path1;Name=FBgn0029704.1;Dir=sensecoverage=100.0;identity=99.7;matches=2037;mismatches=5;indels=1;unknowns=0;Target=FBgn0029704.1 3 35 +;locus=RLOC_00011275
Chr1	stalkie_big_nohaplotig	exon	131080292	131080600	99	+	.	Parent=FBgn0029704.1.mrna1;Target=FBgn0029704.1 1 310 +
Chr1	stalkie_big_nohaplotig	exon	131080657	131081265	99	+	.	Parent=FBgn0029704.1.mrna1;Target=FBgn0029704.1 311 919 +
Chr1	stalkie_big_nohaplotig	exon	131081328	131082451	99	+	.	Parent=FBgn0029704.1.mrna1;Target=FBgn0029704.1 920 2043 +
Chr1	stalkie_big_nohaplotig	CDS	131080294	131080325	.	+	0	Parent=FBgn0029704.1.mrna1
Chr1	gffcl	locus	131085358	131086869	.	-	.	ID=RLOC_00011276;geneIDs=FBgn0011823.2.path1;transcripts=FBgn0011823.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131085358	131086869	.	-	.	ID=FBgn0011823.2.mrna1;geneID=FBgn0011823.2.path1;Name=FBgn0011823.2;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1510;mismatches=2;indels=0;unknowns=0;Target=FBgn0011823.2 1512 1 .;locus=RLOC_00011276
Chr1	stalkie_big_nohaplotig	exon	131085358	131086869	99	-	.	Parent=FBgn0011823.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	131085358	131086869	.	-	0	Parent=FBgn0011823.2.mrna1
Chr1	gffcl	locus	131087420	131087757	.	+	.	ID=RLOC_00011277;geneIDs=FBgn0040907.1.path1;transcripts=FBgn0040907.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131087420	131087757	.	+	.	ID=FBgn0040907.1.mrna1;geneID=FBgn0040907.1.path1;Name=FBgn0040907.1;Dir=sensecoverage=100.0;identity=98.1;matches=209;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011277
Chr1	stalkie_big_nohaplotig	exon	131087420	131087481	100	+	.	Parent=FBgn0040907.1.mrna1;Target=FBgn0040907.1 1 62 +
Chr1	stalkie_big_nohaplotig	exon	131087553	131087656	97	+	.	Parent=FBgn0040907.1.mrna1;Target=FBgn0040907.1 63 166 +
Chr1	stalkie_big_nohaplotig	exon	131087711	131087757	97	+	.	Parent=FBgn0040907.1.mrna1;Target=FBgn0040907.1 167 213 +
Chr1	stalkie_big_nohaplotig	CDS	131087420	131087481	.	+	0	Parent=FBgn0040907.1.mrna1;Target=FBgn0040907.1 1 62 +
Chr1	stalkie_big_nohaplotig	CDS	131087553	131087656	.	+	1	Parent=FBgn0040907.1.mrna1;Target=FBgn0040907.1 63 166 +
Chr1	stalkie_big_nohaplotig	CDS	131087711	131087757	.	+	2	Parent=FBgn0040907.1.mrna1;Target=FBgn0040907.1 167 213 +
Chr1	gffcl	locus	131092538	131093425	.	+	.	ID=RLOC_00011278;geneIDs=comp144459_c0_seq1.path1;transcripts=comp144459_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131092538	131093425	.	+	.	ID=comp144459_c0_seq1.mrna1;geneID=comp144459_c0_seq1.path1;Name=comp144459_c0_seq1;Dir=antisensecoverage=99.9;identity=99.0;matches=708;mismatches=7;indels=0;unknowns=0;Target=comp144459_c0_seq1 58 195 .;locus=RLOC_00011278
Chr1	stalkie_big_nohaplotig	exon	131092538	131092989	99	+	.	Parent=comp144459_c0_seq1.mrna1;Target=comp144459_c0_seq1 264 715 -
Chr1	stalkie_big_nohaplotig	exon	131093163	131093425	98	+	.	Parent=comp144459_c0_seq1.mrna1;Target=comp144459_c0_seq1 1 263 -
Chr1	stalkie_big_nohaplotig	CDS	131093231	131093368	.	+	0	Parent=comp144459_c0_seq1.mrna1
Chr1	gffcl	locus	131184251	131185370	.	-	.	ID=RLOC_00011281;geneIDs=AAEL015651.2.path1;transcripts=AAEL015651.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131184251	131185370	.	-	.	ID=AAEL015651.2.mrna1;geneID=AAEL015651.2.path1;Name=AAEL015651.2;Dir=indeterminatecoverage=99.8;identity=97.7;matches=1094;mismatches=26;indels=0;unknowns=0;Target=AAEL015651.2 1122 3 .;CDS_Target=AAEL015651.2 1122 4 .;locus=RLOC_00011281
Chr1	stalkie_big_nohaplotig	exon	131184251	131185370	97	-	.	Parent=AAEL015651.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	131184251	131185369	.	-	0	Parent=AAEL015651.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131645030	131650045	.	-	.	ID=FBgn0259789.1.mrna1;geneID=FBgn0259789.1.path1;Name=FBgn0259789.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=5004;mismatches=6;indels=6;unknowns=0;Target=FBgn0259789.1 5010 1 .;locus=RLOC_00011282
Chr1	stalkie_big_nohaplotig	exon	131645030	131650045	99	-	.	Parent=FBgn0259789.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	131645030	131650045	.	-	0	Parent=FBgn0259789.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131649575	133276610	.	-	.	ID=comp163118_c1_seq1.mrna1;geneID=comp163118_c1_seq1.path1;Name=comp163118_c1_seq1;Dir=sensecoverage=59.9;identity=99.9;matches=1924;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011282
Chr1	stalkie_big_nohaplotig	exon	131649575	131649585	100	-	.	Parent=comp163118_c1_seq1.mrna1;Target=comp163118_c1_seq1 3012 3022 +
Chr1	stalkie_big_nohaplotig	exon	133274569	133275165	100	-	.	Parent=comp163118_c1_seq1.mrna1;Target=comp163118_c1_seq1 2415 3011 +
Chr1	stalkie_big_nohaplotig	exon	133275231	133276418	100	-	.	Parent=comp163118_c1_seq1.mrna1;Target=comp163118_c1_seq1 1227 2414 +
Chr1	stalkie_big_nohaplotig	exon	133276481	133276610	98	-	.	Parent=comp163118_c1_seq1.mrna1;Target=comp163118_c1_seq1 1097 1226 +
Chr1	stalkie_big_nohaplotig	CDS	131649575	131649585	.	-	2	Parent=comp163118_c1_seq1.mrna1;Target=comp163118_c1_seq1 3012 3022 +
Chr1	stalkie_big_nohaplotig	CDS	133274569	133275165	.	-	2	Parent=comp163118_c1_seq1.mrna1;Target=comp163118_c1_seq1 2415 3011 +
Chr1	stalkie_big_nohaplotig	CDS	133275231	133276418	.	-	2	Parent=comp163118_c1_seq1.mrna1;Target=comp163118_c1_seq1 1227 2414 +
Chr1	stalkie_big_nohaplotig	CDS	133276481	133276610	.	-	0	Parent=comp163118_c1_seq1.mrna1;Target=comp163118_c1_seq1 1097 1226 +
Chr1	stalkie_big_nohaplotig	mRNA	132712305	132712777	.	+	.	ID=comp135034_c0_seq1.mrna1;geneID=comp135034_c0_seq1.path1;Name=comp135034_c0_seq1;Dir=antisensecoverage=95.7;identity=99.4;matches=333;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011282
Chr1	stalkie_big_nohaplotig	exon	132712305	132712392	98	+	.	Parent=comp135034_c0_seq1.mrna1;Target=comp135034_c0_seq1 263 350 -
Chr1	stalkie_big_nohaplotig	exon	132712468	132712559	100	+	.	Parent=comp135034_c0_seq1.mrna1;Target=comp135034_c0_seq1 171 262 -
Chr1	stalkie_big_nohaplotig	exon	132712623	132712777	99	+	.	Parent=comp135034_c0_seq1.mrna1;Target=comp135034_c0_seq1 16 170 -
Chr1	stalkie_big_nohaplotig	CDS	132712470	132712559	.	+	0	Parent=comp135034_c0_seq1.mrna1;Target=comp135034_c0_seq1 171 260 .
Chr1	stalkie_big_nohaplotig	CDS	132712623	132712694	.	+	0	Parent=comp135034_c0_seq1.mrna1;Target=comp135034_c0_seq1 99 170 .
Chr1	stalkie_big_nohaplotig	mRNA	132725109	132728275	.	-	.	ID=FBgn0000581.1.mrna2;geneID=FBgn0000581.1.path2;Name=FBgn0000581.1;Dir=sensecoverage=29.6;identity=99.8;matches=1598;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011282
Chr1	stalkie_big_nohaplotig	exon	132725109	132725159	100	-	.	Parent=FBgn0000581.1.mrna2;Target=FBgn0000581.1 5362 5412 +
Chr1	stalkie_big_nohaplotig	exon	132726185	132726289	100	-	.	Parent=FBgn0000581.1.mrna2;Target=FBgn0000581.1 5257 5361 +
Chr1	stalkie_big_nohaplotig	exon	132726831	132728275	99	-	.	Parent=FBgn0000581.1.mrna2;Target=FBgn0000581.1 3812 5256 +
Chr1	stalkie_big_nohaplotig	CDS	132725109	132725159	.	-	2	Parent=FBgn0000581.1.mrna2;Target=FBgn0000581.1 5362 5412 +
Chr1	stalkie_big_nohaplotig	CDS	132726185	132726289	.	-	2	Parent=FBgn0000581.1.mrna2;Target=FBgn0000581.1 5257 5361 +
Chr1	stalkie_big_nohaplotig	CDS	132726831	132728275	.	-	1	Parent=FBgn0000581.1.mrna2;Target=FBgn0000581.1 3812 5256 +
Chr1	stalkie_big_nohaplotig	mRNA	132737946	132739569	.	+	.	ID=comp158022_c0_seq1.mrna1;geneID=comp158022_c0_seq1.path1;Name=comp158022_c0_seq1;Dir=antisensecoverage=100.0;identity=93.2;matches=938;mismatches=15;indels=53;unknowns=0;Target=comp158022_c0_seq1 635 817 .;locus=RLOC_00011282
Chr1	stalkie_big_nohaplotig	exon	132737946	132738060	98	+	.	Parent=comp158022_c0_seq1.mrna1;Target=comp158022_c0_seq1 845 959 -
Chr1	stalkie_big_nohaplotig	exon	132738685	132739569	92	+	.	Parent=comp158022_c0_seq1.mrna1;Target=comp158022_c0_seq1 1 844 -
Chr1	stalkie_big_nohaplotig	CDS	132738712	132738893	.	+	0	Parent=comp158022_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132768463	132770141	.	+	.	ID=FBgn0026582.1.mrna1;geneID=FBgn0026582.1.path1;Name=FBgn0026582.1;Dir=sensecoverage=100.0;identity=99.4;matches=1243;mismatches=8;indels=0;unknowns=0;locus=RLOC_00011282
Chr1	stalkie_big_nohaplotig	exon	132768463	132768817	99	+	.	Parent=FBgn0026582.1.mrna1;Target=FBgn0026582.1 1 355 +
Chr1	stalkie_big_nohaplotig	exon	132768881	132769040	99	+	.	Parent=FBgn0026582.1.mrna1;Target=FBgn0026582.1 356 515 +
Chr1	stalkie_big_nohaplotig	exon	132769406	132770141	99	+	.	Parent=FBgn0026582.1.mrna1;Target=FBgn0026582.1 516 1251 +
Chr1	stalkie_big_nohaplotig	CDS	132768463	132768817	.	+	0	Parent=FBgn0026582.1.mrna1;Target=FBgn0026582.1 1 355 +
Chr1	stalkie_big_nohaplotig	CDS	132768881	132769040	.	+	2	Parent=FBgn0026582.1.mrna1;Target=FBgn0026582.1 356 515 +
Chr1	stalkie_big_nohaplotig	CDS	132769406	132770141	.	+	1	Parent=FBgn0026582.1.mrna1;Target=FBgn0026582.1 516 1251 +
Chr1	stalkie_big_nohaplotig	mRNA	132774465	134526979	.	+	.	ID=comp156634_c3_seq1.mrna1;geneID=comp156634_c3_seq1.path1;Name=comp156634_c3_seq1;Dir=indeterminatecoverage=82.5;identity=99.5;matches=803;mismatches=3;indels=1;unknowns=0;Target=comp156634_c3_seq1 215 24 .;locus=RLOC_00011282
Chr1	stalkie_big_nohaplotig	exon	132774465	132775065	99	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 625 24 .
Chr1	stalkie_big_nohaplotig	exon	134404151	134404159	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 634 626 .
Chr1	stalkie_big_nohaplotig	exon	134406898	134406905	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 642 635 .
Chr1	stalkie_big_nohaplotig	exon	134406916	134406918	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 677 675 .
Chr1	stalkie_big_nohaplotig	exon	134407788	134407793	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 683 678 .
Chr1	stalkie_big_nohaplotig	exon	134407994	134407999	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 689 684 .
Chr1	stalkie_big_nohaplotig	exon	134408605	134408612	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 697 690 .
Chr1	stalkie_big_nohaplotig	exon	134409665	134409674	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 707 698 .
Chr1	stalkie_big_nohaplotig	exon	134411532	134411533	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 709 708 .
Chr1	stalkie_big_nohaplotig	exon	134417467	134417470	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 713 710 .
Chr1	stalkie_big_nohaplotig	exon	134420352	134420360	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 722 714 .
Chr1	stalkie_big_nohaplotig	exon	134422581	134422586	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 735 730 .
Chr1	stalkie_big_nohaplotig	exon	134430000	134430003	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 739 736 .
Chr1	stalkie_big_nohaplotig	exon	134436059	134436062	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 743 740 .
Chr1	stalkie_big_nohaplotig	exon	134441827	134441837	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 754 744 .
Chr1	stalkie_big_nohaplotig	exon	134448899	134448905	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 767 761 .
Chr1	stalkie_big_nohaplotig	exon	134451819	134451820	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 769 768 .
Chr1	stalkie_big_nohaplotig	exon	134457419	134457424	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 775 770 .
Chr1	stalkie_big_nohaplotig	exon	134470080	134470090	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 786 776 .
Chr1	stalkie_big_nohaplotig	exon	134470286	134470291	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 804 799 .
Chr1	stalkie_big_nohaplotig	exon	134470785	134470787	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 807 805 .
Chr1	stalkie_big_nohaplotig	exon	134471921	134471927	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 814 808 .
Chr1	stalkie_big_nohaplotig	exon	134487852	134487860	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 823 815 .
Chr1	stalkie_big_nohaplotig	exon	134487889	134487898	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 875 866 .
Chr1	stalkie_big_nohaplotig	exon	134487911	134487914	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 932 929 .
Chr1	stalkie_big_nohaplotig	exon	134497250	134497256	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 939 933 .
Chr1	stalkie_big_nohaplotig	exon	134500376	134500383	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 947 940 .
Chr1	stalkie_big_nohaplotig	exon	134518325	134518328	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 951 948 .
Chr1	stalkie_big_nohaplotig	exon	134525884	134525891	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 959 952 .
Chr1	stalkie_big_nohaplotig	exon	134526509	134526518	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 969 960 .
Chr1	stalkie_big_nohaplotig	exon	134526521	134526522	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 1029 1028 .
Chr1	stalkie_big_nohaplotig	exon	134526969	134526979	100	+	.	Parent=comp156634_c3_seq1.mrna1;Target=comp156634_c3_seq1 1040 1030 .
Chr1	stalkie_big_nohaplotig	CDS	132774465	132774655	.	+	0	Parent=comp156634_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132886084	132887803	.	+	.	ID=FBgn0046301.2.mrna1;geneID=FBgn0046301.2.path1;Name=FBgn0046301.2;Dir=sensecoverage=100.0;identity=97.9;matches=1448;mismatches=31;indels=0;unknowns=0;locus=RLOC_00011282
Chr1	stalkie_big_nohaplotig	exon	132886084	132886144	96	+	.	Parent=FBgn0046301.2.mrna1;Target=FBgn0046301.2 1 61 +
Chr1	stalkie_big_nohaplotig	exon	132886208	132887421	97	+	.	Parent=FBgn0046301.2.mrna1;Target=FBgn0046301.2 62 1275 +
Chr1	stalkie_big_nohaplotig	exon	132887494	132887591	98	+	.	Parent=FBgn0046301.2.mrna1;Target=FBgn0046301.2 1276 1373 +
Chr1	stalkie_big_nohaplotig	exon	132887698	132887803	97	+	.	Parent=FBgn0046301.2.mrna1;Target=FBgn0046301.2 1374 1479 +
Chr1	stalkie_big_nohaplotig	CDS	132886084	132886144	.	+	0	Parent=FBgn0046301.2.mrna1;Target=FBgn0046301.2 1 61 +
Chr1	stalkie_big_nohaplotig	CDS	132886208	132887421	.	+	2	Parent=FBgn0046301.2.mrna1;Target=FBgn0046301.2 62 1275 +
Chr1	stalkie_big_nohaplotig	CDS	132887494	132887591	.	+	0	Parent=FBgn0046301.2.mrna1;Target=FBgn0046301.2 1276 1373 +
Chr1	stalkie_big_nohaplotig	CDS	132887698	132887803	.	+	1	Parent=FBgn0046301.2.mrna1;Target=FBgn0046301.2 1374 1479 +
Chr1	stalkie_big_nohaplotig	mRNA	132890623	132891915	.	+	.	ID=FBgn0037626.1.mrna1;geneID=FBgn0037626.1.path1;Name=FBgn0037626.1;Dir=sensecoverage=100.0;identity=99.1;matches=1055;mismatches=10;indels=0;unknowns=0;locus=RLOC_00011282
Chr1	stalkie_big_nohaplotig	exon	132890623	132890892	98	+	.	Parent=FBgn0037626.1.mrna1;Target=FBgn0037626.1 1 270 +
Chr1	stalkie_big_nohaplotig	exon	132890962	132891210	98	+	.	Parent=FBgn0037626.1.mrna1;Target=FBgn0037626.1 271 519 +
Chr1	stalkie_big_nohaplotig	exon	132891290	132891481	99	+	.	Parent=FBgn0037626.1.mrna1;Target=FBgn0037626.1 520 711 +
Chr1	stalkie_big_nohaplotig	exon	132891562	132891915	99	+	.	Parent=FBgn0037626.1.mrna1;Target=FBgn0037626.1 712 1065 +
Chr1	stalkie_big_nohaplotig	CDS	132890623	132890892	.	+	0	Parent=FBgn0037626.1.mrna1;Target=FBgn0037626.1 1 270 +
Chr1	stalkie_big_nohaplotig	CDS	132890962	132891210	.	+	0	Parent=FBgn0037626.1.mrna1;Target=FBgn0037626.1 271 519 +
Chr1	stalkie_big_nohaplotig	CDS	132891290	132891481	.	+	0	Parent=FBgn0037626.1.mrna1;Target=FBgn0037626.1 520 711 +
Chr1	stalkie_big_nohaplotig	CDS	132891562	132891915	.	+	0	Parent=FBgn0037626.1.mrna1;Target=FBgn0037626.1 712 1065 +
Chr1	stalkie_big_nohaplotig	mRNA	133072142	135021874	.	+	.	ID=comp150600_c0_seq1.mrna1;geneID=comp150600_c0_seq1.path1;Name=comp150600_c0_seq1;Dir=indeterminatecoverage=95.4;identity=95.4;matches=608;mismatches=15;indels=14;unknowns=0;locus=RLOC_00011282
Chr1	stalkie_big_nohaplotig	exon	133072142	133072683	96	+	.	Parent=comp150600_c0_seq1.mrna1;Target=comp150600_c0_seq1 543 2 .
Chr1	stalkie_big_nohaplotig	exon	134973032	134973040	100	+	.	Parent=comp150600_c0_seq1.mrna1;Target=comp150600_c0_seq1 552 544 .
Chr1	stalkie_big_nohaplotig	exon	134977230	134977237	100	+	.	Parent=comp150600_c0_seq1.mrna1;Target=comp150600_c0_seq1 560 553 .
Chr1	stalkie_big_nohaplotig	exon	134981943	134981948	100	+	.	Parent=comp150600_c0_seq1.mrna1;Target=comp150600_c0_seq1 566 561 .
Chr1	stalkie_big_nohaplotig	exon	134989871	134989877	85	+	.	Parent=comp150600_c0_seq1.mrna1;Target=comp150600_c0_seq1 573 567 .
Chr1	stalkie_big_nohaplotig	exon	134991881	134991893	84	+	.	Parent=comp150600_c0_seq1.mrna1;Target=comp150600_c0_seq1 586 574 .
Chr1	stalkie_big_nohaplotig	exon	134997278	134997279	100	+	.	Parent=comp150600_c0_seq1.mrna1;Target=comp150600_c0_seq1 588 587 .
Chr1	stalkie_big_nohaplotig	exon	135010945	135010948	100	+	.	Parent=comp150600_c0_seq1.mrna1;Target=comp150600_c0_seq1 592 589 .
Chr1	stalkie_big_nohaplotig	exon	135018353	135018383	77	+	.	Parent=comp150600_c0_seq1.mrna1;Target=comp150600_c0_seq1 621 593 .
Chr1	stalkie_big_nohaplotig	exon	135021866	135021874	100	+	.	Parent=comp150600_c0_seq1.mrna1;Target=comp150600_c0_seq1 630 622 .
Chr1	stalkie_big_nohaplotig	CDS	133072451	133072683	.	+	0	Parent=comp150600_c0_seq1.mrna1;Target=comp150600_c0_seq1 543 308 .
Chr1	stalkie_big_nohaplotig	CDS	134973032	134973040	.	+	1	Parent=comp150600_c0_seq1.mrna1;Target=comp150600_c0_seq1 552 544 .
Chr1	stalkie_big_nohaplotig	CDS	134977230	134977237	.	+	1	Parent=comp150600_c0_seq1.mrna1;Target=comp150600_c0_seq1 560 553 .
Chr1	stalkie_big_nohaplotig	CDS	134981943	134981948	.	+	2	Parent=comp150600_c0_seq1.mrna1;Target=comp150600_c0_seq1 566 561 .
Chr1	stalkie_big_nohaplotig	CDS	134989871	134989877	.	+	2	Parent=comp150600_c0_seq1.mrna1;Target=comp150600_c0_seq1 573 567 .
Chr1	stalkie_big_nohaplotig	CDS	134991881	134991893	.	+	1	Parent=comp150600_c0_seq1.mrna1;Target=comp150600_c0_seq1 586 574 .
Chr1	stalkie_big_nohaplotig	CDS	134997278	134997279	.	+	0	Parent=comp150600_c0_seq1.mrna1;Target=comp150600_c0_seq1 588 587 .
Chr1	stalkie_big_nohaplotig	CDS	135010945	135010948	.	+	1	Parent=comp150600_c0_seq1.mrna1;Target=comp150600_c0_seq1 592 589 .
Chr1	stalkie_big_nohaplotig	CDS	135018353	135018383	.	+	0	Parent=comp150600_c0_seq1.mrna1;Target=comp150600_c0_seq1 621 593 .
Chr1	stalkie_big_nohaplotig	CDS	135021866	135021872	.	+	2	Parent=comp150600_c0_seq1.mrna1;Target=comp150600_c0_seq1 628 622 .
Chr1	stalkie_big_nohaplotig	mRNA	133246271	133247052	.	+	.	ID=comp146900_c0_seq1.mrna1;geneID=comp146900_c0_seq1.path1;Name=comp146900_c0_seq1;Dir=antisensecoverage=99.9;identity=98.2;matches=712;mismatches=10;indels=3;unknowns=0;Target=comp146900_c0_seq1 358 612 .;locus=RLOC_00011282
Chr1	stalkie_big_nohaplotig	exon	133246271	133246736	99	+	.	Parent=comp146900_c0_seq1.mrna1;Target=comp146900_c0_seq1 258 723 -
Chr1	stalkie_big_nohaplotig	exon	133246795	133247052	96	+	.	Parent=comp146900_c0_seq1.mrna1;Target=comp146900_c0_seq1 1 257 -
Chr1	stalkie_big_nohaplotig	CDS	133246382	133246636	.	+	0	Parent=comp146900_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134338347	134339018	.	+	.	ID=comp157994_c1_seq1.mrna2;geneID=comp157994_c1_seq1.path2;Name=comp157994_c1_seq1;Dir=sensecoverage=97.9;identity=97.0;matches=552;mismatches=17;indels=0;unknowns=0;Target=comp157994_c1_seq1 60 221 +;locus=RLOC_00011282
Chr1	stalkie_big_nohaplotig	exon	134338347	134338370	100	+	.	Parent=comp157994_c1_seq1.mrna2;Target=comp157994_c1_seq1 1 24 +
Chr1	stalkie_big_nohaplotig	exon	134338474	134339018	96	+	.	Parent=comp157994_c1_seq1.mrna2;Target=comp157994_c1_seq1 25 569 +
Chr1	stalkie_big_nohaplotig	CDS	134338509	134338670	.	+	0	Parent=comp157994_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	134991783	134992318	.	-	.	ID=comp151932_c0_seq1.mrna1;geneID=comp151932_c0_seq1.path1;Name=comp151932_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=534;mismatches=2;indels=0;unknowns=0;Target=comp151932_c0_seq1 536 1 .;CDS_Target=comp151932_c0_seq1 405 352 .;locus=RLOC_00011282
Chr1	stalkie_big_nohaplotig	exon	134991783	134992318	99	-	.	Parent=comp151932_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134991914	134991967	.	-	0	Parent=comp151932_c0_seq1.mrna1
Chr1	gffcl	locus	131199033	131200031	.	+	.	ID=RLOC_00011283;geneIDs=FBgn0035348.2.path1;transcripts=FBgn0035348.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131199033	131200031	.	+	.	ID=FBgn0035348.2.mrna1;geneID=FBgn0035348.2.path1;Name=FBgn0035348.2;Dir=sensecoverage=99.9;identity=99.4;matches=941;mismatches=5;indels=1;unknowns=0;locus=RLOC_00011283
Chr1	stalkie_big_nohaplotig	exon	131199033	131199090	98	+	.	Parent=FBgn0035348.2.mrna1;Target=FBgn0035348.2 1 59 +
Chr1	stalkie_big_nohaplotig	exon	131199144	131200031	99	+	.	Parent=FBgn0035348.2.mrna1;Target=FBgn0035348.2 60 947 +
Chr1	stalkie_big_nohaplotig	CDS	131199035	131199090	.	+	0	Parent=FBgn0035348.2.mrna1;Target=FBgn0035348.2 3 59 +
Chr1	stalkie_big_nohaplotig	CDS	131199144	131199149	.	+	1	Parent=FBgn0035348.2.mrna1;Target=FBgn0035348.2 60 65 +
Chr1	gffcl	locus	131214959	131216086	.	+	.	ID=RLOC_00011284;geneIDs=AAEL015651.1.path1;transcripts=AAEL015651.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131214959	131216086	.	+	.	ID=AAEL015651.1.mrna1;geneID=AAEL015651.1.path1;Name=AAEL015651.1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1113;mismatches=15;indels=0;unknowns=0;Target=AAEL015651.1 1128 1 .;locus=RLOC_00011284
Chr1	stalkie_big_nohaplotig	exon	131214959	131216086	98	+	.	Parent=AAEL015651.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	131214959	131216086	.	+	0	Parent=AAEL015651.1.mrna1
Chr1	gffcl	locus	131229053	131229526	.	-	.	ID=RLOC_00011285;geneIDs=comp138640_c0_seq1.path1;transcripts=comp138640_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131229053	131229526	.	-	.	ID=comp138640_c0_seq1.mrna1;geneID=comp138640_c0_seq1.path1;Name=comp138640_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=465;mismatches=9;indels=6;unknowns=0;Target=comp138640_c0_seq1 480 1 .;CDS_Target=comp138640_c0_seq1 164 3 .;locus=RLOC_00011285
Chr1	stalkie_big_nohaplotig	exon	131229053	131229526	96	-	.	Parent=comp138640_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	131229369	131229524	.	-	0	Parent=comp138640_c0_seq1.mrna1
Chr1	gffcl	locus	131238951	131239292	.	+	.	ID=RLOC_00011286;geneIDs=comp151891_c0_seq1.path1;transcripts=comp151891_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131238951	131239292	.	+	.	ID=comp151891_c0_seq1.mrna1;geneID=comp151891_c0_seq1.path1;Name=comp151891_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.1;matches=333;mismatches=9;indels=8;unknowns=0;Target=comp151891_c0_seq1 350 1 .;CDS_Target=comp151891_c0_seq1 152 3 .;locus=RLOC_00011286
Chr1	stalkie_big_nohaplotig	exon	131238951	131239292	95	+	.	Parent=comp151891_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	131238953	131239094	.	+	0	Parent=comp151891_c0_seq1.mrna1
Chr1	gffcl	locus	131338162	131338983	.	-	.	ID=RLOC_00011288;geneIDs=comp151592_c0_seq1.path1;transcripts=comp151592_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131338162	131338983	.	-	.	ID=comp151592_c0_seq1.mrna1;geneID=comp151592_c0_seq1.path1;Name=comp151592_c0_seq1;Dir=sensecoverage=92.7;identity=99.6;matches=748;mismatches=3;indels=0;unknowns=0;Target=comp151592_c0_seq1 187 651 +;locus=RLOC_00011288
Chr1	stalkie_big_nohaplotig	exon	131338162	131338805	99	-	.	Parent=comp151592_c0_seq1.mrna1;Target=comp151592_c0_seq1 167 810 +
Chr1	stalkie_big_nohaplotig	exon	131338877	131338983	100	-	.	Parent=comp151592_c0_seq1.mrna1;Target=comp151592_c0_seq1 60 166 +
Chr1	stalkie_big_nohaplotig	CDS	131338321	131338785	.	-	0	Parent=comp151592_c0_seq1.mrna1
Chr1	gffcl	locus	131348359	131360772	.	+	.	ID=RLOC_00011289;geneIDs=ORF277.path1;transcripts=ORF277.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131348359	131360772	.	+	.	ID=ORF277.mrna1;geneID=ORF277.path1;Name=ORF277;Dir=sensecoverage=100.0;identity=98.2;matches=2132;mismatches=28;indels=12;unknowns=0;locus=RLOC_00011289
Chr1	stalkie_big_nohaplotig	exon	131348359	131348442	100	+	.	Parent=ORF277.mrna1;Target=ORF277 1 84 +
Chr1	stalkie_big_nohaplotig	exon	131348500	131348583	100	+	.	Parent=ORF277.mrna1;Target=ORF277 85 168 +
Chr1	stalkie_big_nohaplotig	exon	131348653	131348784	100	+	.	Parent=ORF277.mrna1;Target=ORF277 169 300 +
Chr1	stalkie_big_nohaplotig	exon	131348854	131348904	100	+	.	Parent=ORF277.mrna1;Target=ORF277 301 351 +
Chr1	stalkie_big_nohaplotig	exon	131348967	131349041	88	+	.	Parent=ORF277.mrna1;Target=ORF277 352 435 +
Chr1	stalkie_big_nohaplotig	exon	131349398	131349508	99	+	.	Parent=ORF277.mrna1;Target=ORF277 436 546 +
Chr1	stalkie_big_nohaplotig	exon	131353466	131353621	98	+	.	Parent=ORF277.mrna1;Target=ORF277 547 702 +
Chr1	stalkie_big_nohaplotig	exon	131353687	131353884	98	+	.	Parent=ORF277.mrna1;Target=ORF277 703 900 +
Chr1	stalkie_big_nohaplotig	exon	131353936	131354022	95	+	.	Parent=ORF277.mrna1;Target=ORF277 901 987 +
Chr1	stalkie_big_nohaplotig	exon	131359215	131359310	98	+	.	Parent=ORF277.mrna1;Target=ORF277 988 1083 +
Chr1	stalkie_big_nohaplotig	exon	131359390	131359506	99	+	.	Parent=ORF277.mrna1;Target=ORF277 1084 1200 +
Chr1	stalkie_big_nohaplotig	exon	131359562	131359636	96	+	.	Parent=ORF277.mrna1;Target=ORF277 1201 1275 +
Chr1	stalkie_big_nohaplotig	exon	131359695	131359766	95	+	.	Parent=ORF277.mrna1;Target=ORF277 1276 1347 +
Chr1	stalkie_big_nohaplotig	exon	131359825	131360037	99	+	.	Parent=ORF277.mrna1;Target=ORF277 1348 1560 +
Chr1	stalkie_big_nohaplotig	exon	131360103	131360678	98	+	.	Parent=ORF277.mrna1;Target=ORF277 1561 2139 +
Chr1	stalkie_big_nohaplotig	exon	131360740	131360772	100	+	.	Parent=ORF277.mrna1;Target=ORF277 2140 2172 +
Chr1	stalkie_big_nohaplotig	CDS	131348359	131348442	.	+	0	Parent=ORF277.mrna1;Target=ORF277 1 84 +
Chr1	stalkie_big_nohaplotig	CDS	131348500	131348583	.	+	0	Parent=ORF277.mrna1;Target=ORF277 85 168 +
Chr1	stalkie_big_nohaplotig	CDS	131348653	131348784	.	+	0	Parent=ORF277.mrna1;Target=ORF277 169 300 +
Chr1	stalkie_big_nohaplotig	CDS	131348854	131348904	.	+	0	Parent=ORF277.mrna1;Target=ORF277 301 351 +
Chr1	stalkie_big_nohaplotig	CDS	131348967	131349041	.	+	0	Parent=ORF277.mrna1;Target=ORF277 352 435 +
Chr1	stalkie_big_nohaplotig	CDS	131349398	131349508	.	+	0	Parent=ORF277.mrna1;Target=ORF277 436 546 +
Chr1	stalkie_big_nohaplotig	CDS	131353466	131353621	.	+	0	Parent=ORF277.mrna1;Target=ORF277 547 702 +
Chr1	stalkie_big_nohaplotig	CDS	131353687	131353884	.	+	0	Parent=ORF277.mrna1;Target=ORF277 703 900 +
Chr1	stalkie_big_nohaplotig	CDS	131353936	131354022	.	+	0	Parent=ORF277.mrna1;Target=ORF277 901 987 +
Chr1	stalkie_big_nohaplotig	CDS	131359215	131359310	.	+	0	Parent=ORF277.mrna1;Target=ORF277 988 1083 +
Chr1	stalkie_big_nohaplotig	CDS	131359390	131359506	.	+	0	Parent=ORF277.mrna1;Target=ORF277 1084 1200 +
Chr1	stalkie_big_nohaplotig	CDS	131359562	131359636	.	+	0	Parent=ORF277.mrna1;Target=ORF277 1201 1275 +
Chr1	stalkie_big_nohaplotig	CDS	131359695	131359766	.	+	0	Parent=ORF277.mrna1;Target=ORF277 1276 1347 +
Chr1	stalkie_big_nohaplotig	CDS	131359825	131360037	.	+	0	Parent=ORF277.mrna1;Target=ORF277 1348 1560 +
Chr1	stalkie_big_nohaplotig	CDS	131360103	131360678	.	+	0	Parent=ORF277.mrna1;Target=ORF277 1561 2139 +
Chr1	stalkie_big_nohaplotig	CDS	131360740	131360772	.	+	0	Parent=ORF277.mrna1;Target=ORF277 2140 2172 +
Chr1	gffcl	locus	131380816	131546824	.	+	.	ID=RLOC_00011290;geneIDs=FBgn0000635.1.path1,comp163253_c2_seq1.path1;transcripts=comp163253_c2_seq1.mrna1,FBgn0000635.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131380816	131544882	.	+	.	ID=comp163253_c2_seq1.mrna1;geneID=comp163253_c2_seq1.path1;Name=comp163253_c2_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=2234;mismatches=6;indels=1;unknowns=0;locus=RLOC_00011290
Chr1	stalkie_big_nohaplotig	exon	131380816	131381356	99	+	.	Parent=comp163253_c2_seq1.mrna1;Target=comp163253_c2_seq1 1700 2240 -
Chr1	stalkie_big_nohaplotig	exon	131394349	131395042	99	+	.	Parent=comp163253_c2_seq1.mrna1;Target=comp163253_c2_seq1 1007 1699 -
Chr1	stalkie_big_nohaplotig	exon	131519173	131519347	100	+	.	Parent=comp163253_c2_seq1.mrna1;Target=comp163253_c2_seq1 832 1006 -
Chr1	stalkie_big_nohaplotig	exon	131530276	131530439	99	+	.	Parent=comp163253_c2_seq1.mrna1;Target=comp163253_c2_seq1 668 831 -
Chr1	stalkie_big_nohaplotig	exon	131544079	131544203	100	+	.	Parent=comp163253_c2_seq1.mrna1;Target=comp163253_c2_seq1 543 667 -
Chr1	stalkie_big_nohaplotig	exon	131544341	131544882	99	+	.	Parent=comp163253_c2_seq1.mrna1;Target=comp163253_c2_seq1 1 542 -
Chr1	stalkie_big_nohaplotig	CDS	131394973	131395042	.	+	0	Parent=comp163253_c2_seq1.mrna1;Target=comp163253_c2_seq1 1007 1076 .
Chr1	stalkie_big_nohaplotig	CDS	131519173	131519347	.	+	2	Parent=comp163253_c2_seq1.mrna1;Target=comp163253_c2_seq1 832 1006 .
Chr1	stalkie_big_nohaplotig	CDS	131530276	131530439	.	+	1	Parent=comp163253_c2_seq1.mrna1;Target=comp163253_c2_seq1 668 831 .
Chr1	stalkie_big_nohaplotig	CDS	131544079	131544203	.	+	2	Parent=comp163253_c2_seq1.mrna1;Target=comp163253_c2_seq1 543 667 .
Chr1	stalkie_big_nohaplotig	CDS	131544341	131544880	.	+	0	Parent=comp163253_c2_seq1.mrna1;Target=comp163253_c2_seq1 3 542 .
Chr1	stalkie_big_nohaplotig	mRNA	131544079	131546824	.	+	.	ID=FBgn0000635.1.mrna1;geneID=FBgn0000635.1.path1;Name=FBgn0000635.1;Dir=sensecoverage=71.6;identity=99.5;matches=1790;mismatches=9;indels=0;unknowns=1;locus=RLOC_00011290
Chr1	stalkie_big_nohaplotig	exon	131544079	131544203	100	+	.	Parent=FBgn0000635.1.mrna1;Target=FBgn0000635.1 515 639 +
Chr1	stalkie_big_nohaplotig	exon	131544341	131545831	99	+	.	Parent=FBgn0000635.1.mrna1;Target=FBgn0000635.1 640 2130 +
Chr1	stalkie_big_nohaplotig	exon	131546641	131546824	100	+	.	Parent=FBgn0000635.1.mrna1;Target=FBgn0000635.1 2131 2314 +
Chr1	stalkie_big_nohaplotig	CDS	131544081	131544203	.	+	0	Parent=FBgn0000635.1.mrna1;Target=FBgn0000635.1 517 639 +
Chr1	stalkie_big_nohaplotig	CDS	131544341	131545831	.	+	0	Parent=FBgn0000635.1.mrna1;Target=FBgn0000635.1 640 2130 +
Chr1	stalkie_big_nohaplotig	CDS	131546641	131546823	.	+	0	Parent=FBgn0000635.1.mrna1;Target=FBgn0000635.1 2131 2313 +
Chr1	gffcl	locus	131406338	133460763	.	+	.	ID=RLOC_00011291;geneIDs=comp160533_c1_seq1.path1;transcripts=comp160533_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131406338	133460763	.	+	.	ID=comp160533_c1_seq1.mrna1;geneID=comp160533_c1_seq1.path1;Name=comp160533_c1_seq1;Dir=antisensecoverage=95.9;identity=93.3;matches=1346;mismatches=49;indels=47;unknowns=0;Target=comp160533_c1_seq1 1 846 .;locus=RLOC_00011291
Chr1	stalkie_big_nohaplotig	exon	131406338	131406358	95	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1564 1584 -
Chr1	stalkie_big_nohaplotig	exon	131409902	131409909	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1543 1550 -
Chr1	stalkie_big_nohaplotig	exon	131409921	131409929	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1492 1500 -
Chr1	stalkie_big_nohaplotig	exon	131412363	131412387	56	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1462 1491 -
Chr1	stalkie_big_nohaplotig	exon	131412890	131412898	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1453 1461 -
Chr1	stalkie_big_nohaplotig	exon	131416773	131416777	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1448 1452 -
Chr1	stalkie_big_nohaplotig	exon	131417036	131417037	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1446 1447 -
Chr1	stalkie_big_nohaplotig	exon	131417188	131417199	83	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1434 1445 -
Chr1	stalkie_big_nohaplotig	exon	131423989	131423990	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1374 1375 -
Chr1	stalkie_big_nohaplotig	exon	131428828	131428837	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1364 1373 -
Chr1	stalkie_big_nohaplotig	exon	131432246	131432253	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1356 1363 -
Chr1	stalkie_big_nohaplotig	exon	131434551	131434571	58	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1327 1355 -
Chr1	stalkie_big_nohaplotig	exon	131437496	131437500	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1322 1326 -
Chr1	stalkie_big_nohaplotig	exon	131439168	131439169	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1320 1321 -
Chr1	stalkie_big_nohaplotig	exon	131439663	131439682	55	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1309 1319 -
Chr1	stalkie_big_nohaplotig	exon	131441008	131441013	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1303 1308 -
Chr1	stalkie_big_nohaplotig	exon	131444529	131444536	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1295 1302 -
Chr1	stalkie_big_nohaplotig	exon	131447041	131447046	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1289 1294 -
Chr1	stalkie_big_nohaplotig	exon	131454545	131454554	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1279 1288 -
Chr1	stalkie_big_nohaplotig	exon	131456864	131456871	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1271 1278 -
Chr1	stalkie_big_nohaplotig	exon	131458995	131459006	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1259 1270 -
Chr1	stalkie_big_nohaplotig	exon	131459089	131459090	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1257 1258 -
Chr1	stalkie_big_nohaplotig	exon	131461681	131461686	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1251 1256 -
Chr1	stalkie_big_nohaplotig	exon	131465541	131465542	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1249 1250 -
Chr1	stalkie_big_nohaplotig	exon	131468138	131468147	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1224 1233 -
Chr1	stalkie_big_nohaplotig	exon	131469583	131469589	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1217 1223 -
Chr1	stalkie_big_nohaplotig	exon	131469980	131469988	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1208 1216 -
Chr1	stalkie_big_nohaplotig	exon	131474615	131474628	85	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1194 1207 -
Chr1	stalkie_big_nohaplotig	exon	131479671	131479676	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1188 1193 -
Chr1	stalkie_big_nohaplotig	exon	131486892	131486896	80	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1183 1187 -
Chr1	stalkie_big_nohaplotig	exon	131488242	131488253	83	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1171 1182 -
Chr1	stalkie_big_nohaplotig	exon	131492355	131492387	57	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1147 1170 -
Chr1	stalkie_big_nohaplotig	exon	131493348	131493353	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1141 1146 -
Chr1	stalkie_big_nohaplotig	exon	131497178	131497186	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1132 1140 -
Chr1	stalkie_big_nohaplotig	exon	131500943	131500974	59	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1102 1131 -
Chr1	stalkie_big_nohaplotig	exon	131502532	131502535	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1098 1101 -
Chr1	stalkie_big_nohaplotig	exon	131507835	131507839	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1093 1097 -
Chr1	stalkie_big_nohaplotig	exon	131515782	131515793	75	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1082 1092 -
Chr1	stalkie_big_nohaplotig	exon	131516567	131516605	69	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1046 1081 -
Chr1	stalkie_big_nohaplotig	exon	131519674	131519686	52	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1023 1045 -
Chr1	stalkie_big_nohaplotig	exon	131536232	131536237	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1017 1022 -
Chr1	stalkie_big_nohaplotig	exon	131536243	131536248	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 970 975 -
Chr1	stalkie_big_nohaplotig	exon	133308139	133308152	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 956 969 -
Chr1	stalkie_big_nohaplotig	exon	133357511	133357556	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 910 955 -
Chr1	stalkie_big_nohaplotig	exon	133401464	133401521	100	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 852 909 -
Chr1	stalkie_big_nohaplotig	exon	133459913	133460763	99	+	.	Parent=comp160533_c1_seq1.mrna1;Target=comp160533_c1_seq1 1 851 -
Chr1	stalkie_big_nohaplotig	CDS	133459918	133460763	.	+	0	Parent=comp160533_c1_seq1.mrna1
Chr1	gffcl	locus	131548152	131548702	.	+	.	ID=RLOC_00011292;geneIDs=comp155630_c0_seq1.path1;transcripts=comp155630_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131548152	131548702	.	+	.	ID=comp155630_c0_seq1.mrna1;geneID=comp155630_c0_seq1.path1;Name=comp155630_c0_seq1;Dir=indeterminatecoverage=92.9;identity=99.6;matches=549;mismatches=0;indels=2;unknowns=0;Target=comp155630_c0_seq1 567 19 .;CDS_Target=comp155630_c0_seq1 67 20 .;locus=RLOC_00011292
Chr1	stalkie_big_nohaplotig	exon	131548152	131548702	99	+	.	Parent=comp155630_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	131548153	131548200	.	+	0	Parent=comp155630_c0_seq1.mrna1
Chr1	gffcl	locus	131557529	131558222	.	-	.	ID=RLOC_00011293;geneIDs=comp155639_c0_seq1.path1;transcripts=comp155639_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131557529	131558222	.	-	.	ID=comp155639_c0_seq1.mrna1;geneID=comp155639_c0_seq1.path1;Name=comp155639_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.4;matches=669;mismatches=24;indels=1;unknowns=0;Target=comp155639_c0_seq1 693 1 .;CDS_Target=comp155639_c0_seq1 465 367 .;locus=RLOC_00011293
Chr1	stalkie_big_nohaplotig	exon	131557529	131558222	96	-	.	Parent=comp155639_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	131557757	131557855	.	-	0	Parent=comp155639_c0_seq1.mrna1
Chr1	gffcl	locus	131567333	131567673	.	-	.	ID=RLOC_00011294;geneIDs=comp148392_c0_seq1.path1;transcripts=comp148392_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131567333	131567673	.	-	.	ID=comp148392_c0_seq1.mrna1;geneID=comp148392_c0_seq1.path1;Name=comp148392_c0_seq1;Dir=indeterminatecoverage=99.4;identity=97.7;matches=333;mismatches=8;indels=0;unknowns=0;Target=comp148392_c0_seq1 343 3 .;CDS_Target=comp148392_c0_seq1 213 169 .;locus=RLOC_00011294
Chr1	stalkie_big_nohaplotig	exon	131567333	131567673	97	-	.	Parent=comp148392_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	131567463	131567507	.	-	0	Parent=comp148392_c0_seq1.mrna1
Chr1	gffcl	locus	131570216	131571013	.	-	.	ID=RLOC_00011295;geneIDs=comp163353_c0_seq1.path1;transcripts=comp163353_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131570216	131571013	.	-	.	ID=comp163353_c0_seq1.mrna1;geneID=comp163353_c0_seq1.path1;Name=comp163353_c0_seq1;Dir=indeterminatecoverage=82.5;identity=88.1;matches=770;mismatches=28;indels=76;unknowns=0;Target=comp163353_c0_seq1 875 2 .;CDS_Target=comp163353_c0_seq1 91 29 .;locus=RLOC_00011295
Chr1	stalkie_big_nohaplotig	exon	131570216	131571013	88	-	.	Parent=comp163353_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	131570924	131570986	.	-	0	Parent=comp163353_c0_seq1.mrna1
Chr1	gffcl	locus	131571487	131571870	.	-	.	ID=RLOC_00011296;geneIDs=comp141514_c0_seq1.path1;transcripts=comp141514_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131571487	131571870	.	-	.	ID=comp141514_c0_seq1.mrna1;geneID=comp141514_c0_seq1.path1;Name=comp141514_c0_seq1;Dir=indeterminatecoverage=100.0;identity=87.0;matches=334;mismatches=11;indels=39;unknowns=0;Target=comp141514_c0_seq1 345 1 .;CDS_Target=comp141514_c0_seq1 234 199 .;locus=RLOC_00011296
Chr1	stalkie_big_nohaplotig	exon	131571487	131571870	86	-	.	Parent=comp141514_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	131571598	131571633	.	-	0	Parent=comp141514_c0_seq1.mrna1
Chr1	gffcl	locus	131574193	131575185	.	+	.	ID=RLOC_00011297;geneIDs=FBgn0066114.1.path1;transcripts=FBgn0066114.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131574193	131575185	.	+	.	ID=FBgn0066114.1.mrna1;geneID=FBgn0066114.1.path1;Name=FBgn0066114.1;Dir=sensecoverage=100.0;identity=99.7;matches=924;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011297
Chr1	stalkie_big_nohaplotig	exon	131574193	131574410	100	+	.	Parent=FBgn0066114.1.mrna1;Target=FBgn0066114.1 1 218 +
Chr1	stalkie_big_nohaplotig	exon	131574477	131575185	99	+	.	Parent=FBgn0066114.1.mrna1;Target=FBgn0066114.1 219 927 +
Chr1	stalkie_big_nohaplotig	CDS	131574193	131574410	.	+	0	Parent=FBgn0066114.1.mrna1;Target=FBgn0066114.1 1 218 +
Chr1	stalkie_big_nohaplotig	CDS	131574477	131575185	.	+	1	Parent=FBgn0066114.1.mrna1;Target=FBgn0066114.1 219 927 +
Chr1	gffcl	locus	131575639	131576504	.	-	.	ID=RLOC_00011298;geneIDs=FBgn0031775.2.path1;transcripts=FBgn0031775.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131575639	131576504	.	-	.	ID=FBgn0031775.2.mrna1;geneID=FBgn0031775.2.path1;Name=FBgn0031775.2;Dir=sensecoverage=100.0;identity=98.5;matches=777;mismatches=12;indels=0;unknowns=0;locus=RLOC_00011298
Chr1	stalkie_big_nohaplotig	exon	131575639	131575830	98	-	.	Parent=FBgn0031775.2.mrna1;Target=FBgn0031775.2 598 789 +
Chr1	stalkie_big_nohaplotig	exon	131575908	131576504	98	-	.	Parent=FBgn0031775.2.mrna1;Target=FBgn0031775.2 1 597 +
Chr1	stalkie_big_nohaplotig	CDS	131575639	131575830	.	-	0	Parent=FBgn0031775.2.mrna1;Target=FBgn0031775.2 598 789 +
Chr1	stalkie_big_nohaplotig	CDS	131575908	131576504	.	-	0	Parent=FBgn0031775.2.mrna1;Target=FBgn0031775.2 1 597 +
Chr1	gffcl	locus	131592108	131592721	.	-	.	ID=RLOC_00011299;geneIDs=FBgn0035169.2.path1;transcripts=FBgn0035169.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131592108	131592721	.	-	.	ID=FBgn0035169.2.mrna1;geneID=FBgn0035169.2.path1;Name=FBgn0035169.2;Dir=indeterminatecoverage=100.0;identity=98.4;matches=605;mismatches=9;indels=1;unknowns=0;Target=FBgn0035169.2 615 1 .;CDS_Target=FBgn0035169.2 155 3 .;locus=RLOC_00011299
Chr1	stalkie_big_nohaplotig	exon	131592108	131592721	98	-	.	Parent=FBgn0035169.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	131592568	131592719	.	-	0	Parent=FBgn0035169.2.mrna1
Chr1	gffcl	locus	131595978	131598281	.	-	.	ID=RLOC_00011300;geneIDs=FBgn0028274.1.path1;transcripts=FBgn0028274.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131595978	131598281	.	-	.	ID=FBgn0028274.1.mrna1;geneID=FBgn0028274.1.path1;Name=FBgn0028274.1;Dir=sensecoverage=100.0;identity=98.9;matches=1843;mismatches=20;indels=0;unknowns=0;locus=RLOC_00011300
Chr1	stalkie_big_nohaplotig	exon	131595978	131596193	99	-	.	Parent=FBgn0028274.1.mrna1;Target=FBgn0028274.1 1648 1863 +
Chr1	stalkie_big_nohaplotig	exon	131596425	131596630	99	-	.	Parent=FBgn0028274.1.mrna1;Target=FBgn0028274.1 1442 1647 +
Chr1	stalkie_big_nohaplotig	exon	131596699	131596852	100	-	.	Parent=FBgn0028274.1.mrna1;Target=FBgn0028274.1 1288 1441 +
Chr1	stalkie_big_nohaplotig	exon	131596916	131598091	98	-	.	Parent=FBgn0028274.1.mrna1;Target=FBgn0028274.1 112 1287 +
Chr1	stalkie_big_nohaplotig	exon	131598171	131598281	99	-	.	Parent=FBgn0028274.1.mrna1;Target=FBgn0028274.1 1 111 +
Chr1	stalkie_big_nohaplotig	CDS	131595978	131596193	.	-	0	Parent=FBgn0028274.1.mrna1;Target=FBgn0028274.1 1648 1863 +
Chr1	stalkie_big_nohaplotig	CDS	131596425	131596630	.	-	2	Parent=FBgn0028274.1.mrna1;Target=FBgn0028274.1 1442 1647 +
Chr1	stalkie_big_nohaplotig	CDS	131596699	131596852	.	-	0	Parent=FBgn0028274.1.mrna1;Target=FBgn0028274.1 1288 1441 +
Chr1	stalkie_big_nohaplotig	CDS	131596916	131598091	.	-	0	Parent=FBgn0028274.1.mrna1;Target=FBgn0028274.1 112 1287 +
Chr1	stalkie_big_nohaplotig	CDS	131598171	131598281	.	-	0	Parent=FBgn0028274.1.mrna1;Target=FBgn0028274.1 1 111 +
Chr1	gffcl	locus	131606832	131607700	.	-	.	ID=RLOC_00011301;geneIDs=comp135625_c0_seq1.path1;transcripts=comp135625_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131606832	131607700	.	-	.	ID=comp135625_c0_seq1.mrna1;geneID=comp135625_c0_seq1.path1;Name=comp135625_c0_seq1;Dir=indeterminatecoverage=97.1;identity=91.5;matches=728;mismatches=52;indels=16;unknowns=0;Target=comp135625_c0_seq1 135 88 .;locus=RLOC_00011301
Chr1	stalkie_big_nohaplotig	exon	131606832	131607061	96	-	.	Parent=comp135625_c0_seq1.mrna1;Target=comp135625_c0_seq1 799 570 .
Chr1	stalkie_big_nohaplotig	exon	131607151	131607700	89	-	.	Parent=comp135625_c0_seq1.mrna1;Target=comp135625_c0_seq1 569 4 .
Chr1	stalkie_big_nohaplotig	CDS	131607585	131607616	.	-	0	Parent=comp135625_c0_seq1.mrna1
Chr1	gffcl	locus	131627485	131766674	.	-	.	ID=RLOC_00011302;geneIDs=comp161261_c0_seq1.path1;transcripts=comp161261_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131627485	131766674	.	-	.	ID=comp161261_c0_seq1.mrna1;geneID=comp161261_c0_seq1.path1;Name=comp161261_c0_seq1;Dir=indeterminatecoverage=90.0;identity=87.2;matches=858;mismatches=56;indels=70;unknowns=0;Target=comp161261_c0_seq1 694 521 .;locus=RLOC_00011302
Chr1	stalkie_big_nohaplotig	exon	131627485	131627494	90	-	.	Parent=comp161261_c0_seq1.mrna1;Target=comp161261_c0_seq1 982 973 .
Chr1	stalkie_big_nohaplotig	exon	131632626	131632627	100	-	.	Parent=comp161261_c0_seq1.mrna1;Target=comp161261_c0_seq1 972 971 .
Chr1	stalkie_big_nohaplotig	exon	131638363	131638364	100	-	.	Parent=comp161261_c0_seq1.mrna1;Target=comp161261_c0_seq1 970 969 .
Chr1	stalkie_big_nohaplotig	exon	131638759	131638765	100	-	.	Parent=comp161261_c0_seq1.mrna1;Target=comp161261_c0_seq1 968 962 .
Chr1	stalkie_big_nohaplotig	exon	131765780	131766674	87	-	.	Parent=comp161261_c0_seq1.mrna1;Target=comp161261_c0_seq1 961 1 .
Chr1	stalkie_big_nohaplotig	CDS	131765987	131766152	.	-	0	Parent=comp161261_c0_seq1.mrna1
Chr1	gffcl	locus	131651372	131651715	.	-	.	ID=RLOC_00011303;geneIDs=comp494961_c0_seq1.path1;transcripts=comp494961_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131651372	131651715	.	-	.	ID=comp494961_c0_seq1.mrna1;geneID=comp494961_c0_seq1.path1;Name=comp494961_c0_seq1;Dir=indeterminatecoverage=97.2;identity=99.4;matches=342;mismatches=2;indels=0;unknowns=0;Target=comp494961_c0_seq1 348 5 .;CDS_Target=comp494961_c0_seq1 87 7 .;locus=RLOC_00011303
Chr1	stalkie_big_nohaplotig	exon	131651372	131651715	99	-	.	Parent=comp494961_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	131651633	131651713	.	-	0	Parent=comp494961_c0_seq1.mrna1
Chr1	gffcl	locus	131717503	131718134	.	-	.	ID=RLOC_00011304;geneIDs=comp153106_c1_seq1.path1;transcripts=comp153106_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131717503	131718134	.	-	.	ID=comp153106_c1_seq1.mrna1;geneID=comp153106_c1_seq1.path1;Name=comp153106_c1_seq1;Dir=indeterminatecoverage=92.9;identity=98.7;matches=626;mismatches=1;indels=7;unknowns=0;Target=comp153106_c1_seq1 677 49 .;CDS_Target=comp153106_c1_seq1 677 597 .;locus=RLOC_00011304
Chr1	stalkie_big_nohaplotig	exon	131717503	131718134	98	-	.	Parent=comp153106_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	131717503	131717583	.	-	0	Parent=comp153106_c1_seq1.mrna1
Chr1	gffcl	locus	131721007	131722424	.	+	.	ID=RLOC_00011305;geneIDs=comp149627_c0_seq1.path1,comp158922_c0_seq1.path1;transcripts=comp158922_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131721007	131721926	.	+	.	ID=comp158922_c0_seq1.mrna1;geneID=comp158922_c0_seq1.path1;Name=comp158922_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.5;matches=907;mismatches=10;indels=4;unknowns=0;Target=comp158922_c0_seq1 594 511 .;locus=RLOC_00011305
Chr1	stalkie_big_nohaplotig	exon	131721007	131721734	98	+	.	Parent=comp158922_c0_seq1.mrna1;Target=comp158922_c0_seq1 730 1 .
Chr1	stalkie_big_nohaplotig	exon	131721737	131721926	98	+	.	Parent=comp158922_c0_seq1.mrna1;Target=comp158922_c0_seq1 986 797 .
Chr1	stalkie_big_nohaplotig	CDS	131721515	131721598	.	+	0	Parent=comp158922_c0_seq1.mrna1
Chr1	gffcl	locus	131725405	131728541	.	-	.	ID=RLOC_00011306;geneIDs=FBgn0261811.1.path1;transcripts=FBgn0261811.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131725405	131728541	.	-	.	ID=FBgn0261811.1.mrna1;geneID=FBgn0261811.1.path1;Name=FBgn0261811.1;Dir=sensecoverage=97.0;identity=99.8;matches=3076;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011306
Chr1	stalkie_big_nohaplotig	exon	131725405	131727593	99	-	.	Parent=FBgn0261811.1.mrna1;Target=FBgn0261811.1 989 3177 +
Chr1	stalkie_big_nohaplotig	exon	131727650	131728541	100	-	.	Parent=FBgn0261811.1.mrna1;Target=FBgn0261811.1 97 988 +
Chr1	stalkie_big_nohaplotig	CDS	131725405	131727593	.	-	2	Parent=FBgn0261811.1.mrna1;Target=FBgn0261811.1 989 3177 +
Chr1	stalkie_big_nohaplotig	CDS	131727650	131728541	.	-	0	Parent=FBgn0261811.1.mrna1;Target=FBgn0261811.1 97 988 +
Chr1	gffcl	locus	131756687	131760907	.	-	.	ID=RLOC_00011307;geneIDs=FBgn0030121.1.path1;transcripts=FBgn0030121.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131756687	131760907	.	-	.	ID=FBgn0030121.1.mrna1;geneID=FBgn0030121.1.path1;Name=FBgn0030121.1;Dir=sensecoverage=100.0;identity=99.4;matches=1988;mismatches=13;indels=0;unknowns=0;locus=RLOC_00011307
Chr1	stalkie_big_nohaplotig	exon	131756687	131757796	99	-	.	Parent=FBgn0030121.1.mrna1;Target=FBgn0030121.1 892 2001 +
Chr1	stalkie_big_nohaplotig	exon	131757859	131758435	99	-	.	Parent=FBgn0030121.1.mrna1;Target=FBgn0030121.1 315 891 +
Chr1	stalkie_big_nohaplotig	exon	131758554	131758701	100	-	.	Parent=FBgn0030121.1.mrna1;Target=FBgn0030121.1 167 314 +
Chr1	stalkie_big_nohaplotig	exon	131760688	131760805	99	-	.	Parent=FBgn0030121.1.mrna1;Target=FBgn0030121.1 49 166 +
Chr1	stalkie_big_nohaplotig	exon	131760860	131760907	100	-	.	Parent=FBgn0030121.1.mrna1;Target=FBgn0030121.1 1 48 +
Chr1	stalkie_big_nohaplotig	CDS	131756687	131757796	.	-	0	Parent=FBgn0030121.1.mrna1;Target=FBgn0030121.1 892 2001 +
Chr1	stalkie_big_nohaplotig	CDS	131757859	131758435	.	-	1	Parent=FBgn0030121.1.mrna1;Target=FBgn0030121.1 315 891 +
Chr1	stalkie_big_nohaplotig	CDS	131758554	131758701	.	-	2	Parent=FBgn0030121.1.mrna1;Target=FBgn0030121.1 167 314 +
Chr1	stalkie_big_nohaplotig	CDS	131760688	131760805	.	-	0	Parent=FBgn0030121.1.mrna1;Target=FBgn0030121.1 49 166 +
Chr1	stalkie_big_nohaplotig	CDS	131760860	131760907	.	-	0	Parent=FBgn0030121.1.mrna1;Target=FBgn0030121.1 1 48 +
Chr1	gffcl	locus	131764400	131766921	.	+	.	ID=RLOC_00011308;geneIDs=FBgn0034573.1.path1;transcripts=FBgn0034573.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131764400	131766921	.	+	.	ID=FBgn0034573.1.mrna1;geneID=FBgn0034573.1.path1;Name=FBgn0034573.1;Dir=sensecoverage=100.0;identity=99.8;matches=1320;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011308
Chr1	stalkie_big_nohaplotig	exon	131764400	131764670	100	+	.	Parent=FBgn0034573.1.mrna1;Target=FBgn0034573.1 1 271 +
Chr1	stalkie_big_nohaplotig	exon	131764745	131765526	99	+	.	Parent=FBgn0034573.1.mrna1;Target=FBgn0034573.1 272 1053 +
Chr1	stalkie_big_nohaplotig	exon	131766652	131766921	100	+	.	Parent=FBgn0034573.1.mrna1;Target=FBgn0034573.1 1054 1323 +
Chr1	stalkie_big_nohaplotig	CDS	131764400	131764670	.	+	0	Parent=FBgn0034573.1.mrna1;Target=FBgn0034573.1 1 271 +
Chr1	stalkie_big_nohaplotig	CDS	131764745	131765526	.	+	2	Parent=FBgn0034573.1.mrna1;Target=FBgn0034573.1 272 1053 +
Chr1	stalkie_big_nohaplotig	CDS	131766652	131766921	.	+	0	Parent=FBgn0034573.1.mrna1;Target=FBgn0034573.1 1054 1323 +
Chr1	gffcl	locus	131767293	131778724	.	-	.	ID=RLOC_00011309;geneIDs=FBgn0030687.1.path1;transcripts=FBgn0030687.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131767293	131778724	.	-	.	ID=FBgn0030687.1.mrna1;geneID=FBgn0030687.1.path1;Name=FBgn0030687.1;Dir=sensecoverage=100.0;identity=99.3;matches=4105;mismatches=29;indels=0;unknowns=0;locus=RLOC_00011309
Chr1	stalkie_big_nohaplotig	exon	131767293	131767475	99	-	.	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 3952 4134 +
Chr1	stalkie_big_nohaplotig	exon	131767533	131768040	98	-	.	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 3444 3951 +
Chr1	stalkie_big_nohaplotig	exon	131768104	131768222	99	-	.	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 3325 3443 +
Chr1	stalkie_big_nohaplotig	exon	131768283	131768423	98	-	.	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 3184 3324 +
Chr1	stalkie_big_nohaplotig	exon	131769544	131769808	99	-	.	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 2919 3183 +
Chr1	stalkie_big_nohaplotig	exon	131769881	131770158	100	-	.	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 2641 2918 +
Chr1	stalkie_big_nohaplotig	exon	131770666	131770823	99	-	.	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 2483 2640 +
Chr1	stalkie_big_nohaplotig	exon	131770891	131771308	100	-	.	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 2065 2482 +
Chr1	stalkie_big_nohaplotig	exon	131776244	131776389	98	-	.	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 1919 2064 +
Chr1	stalkie_big_nohaplotig	exon	131776455	131777539	99	-	.	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 834 1918 +
Chr1	stalkie_big_nohaplotig	exon	131777779	131778422	99	-	.	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 190 833 +
Chr1	stalkie_big_nohaplotig	exon	131778479	131778608	99	-	.	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 60 189 +
Chr1	stalkie_big_nohaplotig	exon	131778666	131778724	100	-	.	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 1 59 +
Chr1	stalkie_big_nohaplotig	CDS	131767293	131767475	.	-	0	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 3952 4134 +
Chr1	stalkie_big_nohaplotig	CDS	131767533	131768040	.	-	1	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 3444 3951 +
Chr1	stalkie_big_nohaplotig	CDS	131768104	131768222	.	-	0	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 3325 3443 +
Chr1	stalkie_big_nohaplotig	CDS	131768283	131768423	.	-	0	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 3184 3324 +
Chr1	stalkie_big_nohaplotig	CDS	131769544	131769808	.	-	1	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 2919 3183 +
Chr1	stalkie_big_nohaplotig	CDS	131769881	131770158	.	-	0	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 2641 2918 +
Chr1	stalkie_big_nohaplotig	CDS	131770666	131770823	.	-	2	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 2483 2640 +
Chr1	stalkie_big_nohaplotig	CDS	131770891	131771308	.	-	0	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 2065 2482 +
Chr1	stalkie_big_nohaplotig	CDS	131776244	131776389	.	-	2	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 1919 2064 +
Chr1	stalkie_big_nohaplotig	CDS	131776455	131777539	.	-	1	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 834 1918 +
Chr1	stalkie_big_nohaplotig	CDS	131777779	131778422	.	-	0	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 190 833 +
Chr1	stalkie_big_nohaplotig	CDS	131778479	131778608	.	-	1	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 60 189 +
Chr1	stalkie_big_nohaplotig	CDS	131778666	131778724	.	-	0	Parent=FBgn0030687.1.mrna1;Target=FBgn0030687.1 1 59 +
Chr1	gffcl	locus	131774401	131775285	.	+	.	ID=RLOC_00011310;geneIDs=FBgn0030688.1.path1;transcripts=FBgn0030688.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131774401	131775285	.	+	.	ID=FBgn0030688.1.mrna1;geneID=FBgn0030688.1.path1;Name=FBgn0030688.1;Dir=sensecoverage=100.0;identity=99.6;matches=825;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011310
Chr1	stalkie_big_nohaplotig	exon	131774401	131774499	100	+	.	Parent=FBgn0030688.1.mrna1;Target=FBgn0030688.1 1 99 +
Chr1	stalkie_big_nohaplotig	exon	131774557	131775285	99	+	.	Parent=FBgn0030688.1.mrna1;Target=FBgn0030688.1 100 828 +
Chr1	stalkie_big_nohaplotig	CDS	131774401	131774499	.	+	0	Parent=FBgn0030688.1.mrna1;Target=FBgn0030688.1 1 99 +
Chr1	stalkie_big_nohaplotig	CDS	131774557	131775285	.	+	0	Parent=FBgn0030688.1.mrna1;Target=FBgn0030688.1 100 828 +
Chr1	gffcl	locus	131782155	131787063	.	+	.	ID=RLOC_00011311;geneIDs=FBgn0028325.2.path1,comp147317_c0_seq1.path1,comp151572_c0_seq1.path1;transcripts=FBgn0028325.2.mrna1,comp151572_c0_seq1.mrna1,comp147317_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131782155	131787063	.	+	.	ID=FBgn0028325.2.mrna1;geneID=FBgn0028325.2.path1;Name=FBgn0028325.2;Dir=sensecoverage=100.0;identity=99.8;matches=1200;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011311
Chr1	stalkie_big_nohaplotig	exon	131782155	131782220	98	+	.	Parent=FBgn0028325.2.mrna1;Target=FBgn0028325.2 1 66 +
Chr1	stalkie_big_nohaplotig	exon	131782314	131782382	100	+	.	Parent=FBgn0028325.2.mrna1;Target=FBgn0028325.2 67 135 +
Chr1	stalkie_big_nohaplotig	exon	131784977	131785166	100	+	.	Parent=FBgn0028325.2.mrna1;Target=FBgn0028325.2 136 325 +
Chr1	stalkie_big_nohaplotig	exon	131785238	131785440	100	+	.	Parent=FBgn0028325.2.mrna1;Target=FBgn0028325.2 326 528 +
Chr1	stalkie_big_nohaplotig	exon	131785505	131785676	100	+	.	Parent=FBgn0028325.2.mrna1;Target=FBgn0028325.2 529 700 +
Chr1	stalkie_big_nohaplotig	exon	131786494	131786816	99	+	.	Parent=FBgn0028325.2.mrna1;Target=FBgn0028325.2 701 1023 +
Chr1	stalkie_big_nohaplotig	exon	131786884	131787063	100	+	.	Parent=FBgn0028325.2.mrna1;Target=FBgn0028325.2 1024 1203 +
Chr1	stalkie_big_nohaplotig	CDS	131782155	131782220	.	+	0	Parent=FBgn0028325.2.mrna1;Target=FBgn0028325.2 1 66 +
Chr1	stalkie_big_nohaplotig	CDS	131782314	131782382	.	+	0	Parent=FBgn0028325.2.mrna1;Target=FBgn0028325.2 67 135 +
Chr1	stalkie_big_nohaplotig	CDS	131784977	131785166	.	+	0	Parent=FBgn0028325.2.mrna1;Target=FBgn0028325.2 136 325 +
Chr1	stalkie_big_nohaplotig	CDS	131785238	131785440	.	+	2	Parent=FBgn0028325.2.mrna1;Target=FBgn0028325.2 326 528 +
Chr1	stalkie_big_nohaplotig	CDS	131785505	131785676	.	+	0	Parent=FBgn0028325.2.mrna1;Target=FBgn0028325.2 529 700 +
Chr1	stalkie_big_nohaplotig	CDS	131786494	131786816	.	+	2	Parent=FBgn0028325.2.mrna1;Target=FBgn0028325.2 701 1023 +
Chr1	stalkie_big_nohaplotig	CDS	131786884	131787063	.	+	0	Parent=FBgn0028325.2.mrna1;Target=FBgn0028325.2 1024 1203 +
Chr1	stalkie_big_nohaplotig	mRNA	131782359	131783054	.	+	.	ID=comp151572_c0_seq1.mrna1;geneID=comp151572_c0_seq1.path1;Name=comp151572_c0_seq1;Dir=indeterminatecoverage=94.8;identity=98.9;matches=689;mismatches=4;indels=4;unknowns=0;Target=comp151572_c0_seq1 694 1 .;CDS_Target=comp151572_c0_seq1 131 3 .;locus=RLOC_00011311
Chr1	stalkie_big_nohaplotig	exon	131782359	131783054	98	+	.	Parent=comp151572_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	131782361	131782489	.	+	0	Parent=comp151572_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131784787	131784998	.	+	.	ID=comp147317_c0_seq1.mrna1;geneID=comp147317_c0_seq1.path1;Name=comp147317_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.5;matches=211;mismatches=1;indels=0;unknowns=0;Target=comp147317_c0_seq1 214 3 .;CDS_Target=comp147317_c0_seq1 149 3 .;locus=RLOC_00011311
Chr1	stalkie_big_nohaplotig	exon	131784787	131784998	99	+	.	Parent=comp147317_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	131784787	131784933	.	+	0	Parent=comp147317_c0_seq1.mrna1
Chr1	gffcl	locus	131783655	131784698	.	+	.	ID=RLOC_00011312;geneIDs=comp160601_c2_seq1.path1;transcripts=comp160601_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131783655	131784698	.	+	.	ID=comp160601_c2_seq1.mrna1;geneID=comp160601_c2_seq1.path1;Name=comp160601_c2_seq1;Dir=sensecoverage=97.2;identity=93.0;matches=785;mismatches=45;indels=14;unknowns=0;Target=comp160601_c2_seq1 597 661 +;locus=RLOC_00011312
Chr1	stalkie_big_nohaplotig	exon	131783655	131784126	94	+	.	Parent=comp160601_c2_seq1.mrna1;Target=comp160601_c2_seq1 1 472 +
Chr1	stalkie_big_nohaplotig	exon	131784156	131784326	95	+	.	Parent=comp160601_c2_seq1.mrna1;Target=comp160601_c2_seq1 491 661 +
Chr1	stalkie_big_nohaplotig	exon	131784507	131784698	86	+	.	Parent=comp160601_c2_seq1.mrna1;Target=comp160601_c2_seq1 662 857 +
Chr1	stalkie_big_nohaplotig	CDS	131784262	131784326	.	+	0	Parent=comp160601_c2_seq1.mrna1
Chr1	gffcl	locus	131789268	131791363	.	+	.	ID=RLOC_00011313;geneIDs=FBgn0028325.1.path1;transcripts=FBgn0028325.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131789268	131791363	.	+	.	ID=FBgn0028325.1.mrna1;geneID=FBgn0028325.1.path1;Name=FBgn0028325.1;Dir=sensecoverage=98.7;identity=99.7;matches=1151;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011313
Chr1	stalkie_big_nohaplotig	exon	131789268	131789480	99	+	.	Parent=FBgn0028325.1.mrna1;Target=FBgn0028325.1 1 213 +
Chr1	stalkie_big_nohaplotig	exon	131789539	131789728	100	+	.	Parent=FBgn0028325.1.mrna1;Target=FBgn0028325.1 214 403 +
Chr1	stalkie_big_nohaplotig	exon	131789791	131789993	99	+	.	Parent=FBgn0028325.1.mrna1;Target=FBgn0028325.1 404 606 +
Chr1	stalkie_big_nohaplotig	exon	131790683	131790854	100	+	.	Parent=FBgn0028325.1.mrna1;Target=FBgn0028325.1 607 778 +
Chr1	stalkie_big_nohaplotig	exon	131790915	131791237	99	+	.	Parent=FBgn0028325.1.mrna1;Target=FBgn0028325.1 779 1101 +
Chr1	stalkie_big_nohaplotig	exon	131791310	131791363	100	+	.	Parent=FBgn0028325.1.mrna1;Target=FBgn0028325.1 1102 1155 +
Chr1	stalkie_big_nohaplotig	CDS	131789268	131789480	.	+	0	Parent=FBgn0028325.1.mrna1;Target=FBgn0028325.1 1 213 +
Chr1	stalkie_big_nohaplotig	CDS	131789539	131789728	.	+	0	Parent=FBgn0028325.1.mrna1;Target=FBgn0028325.1 214 403 +
Chr1	stalkie_big_nohaplotig	CDS	131789791	131789993	.	+	2	Parent=FBgn0028325.1.mrna1;Target=FBgn0028325.1 404 606 +
Chr1	stalkie_big_nohaplotig	CDS	131790683	131790854	.	+	0	Parent=FBgn0028325.1.mrna1;Target=FBgn0028325.1 607 778 +
Chr1	stalkie_big_nohaplotig	CDS	131790915	131791237	.	+	2	Parent=FBgn0028325.1.mrna1;Target=FBgn0028325.1 779 1101 +
Chr1	stalkie_big_nohaplotig	CDS	131791310	131791363	.	+	0	Parent=FBgn0028325.1.mrna1;Target=FBgn0028325.1 1102 1155 +
Chr1	gffcl	locus	131814046	131815710	.	-	.	ID=RLOC_00011314;geneIDs=comp155887_c1_seq1.path1;transcripts=comp155887_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131814046	131815710	.	-	.	ID=comp155887_c1_seq1.mrna1;geneID=comp155887_c1_seq1.path1;Name=comp155887_c1_seq1;Dir=indeterminatecoverage=98.9;identity=99.5;matches=1657;mismatches=8;indels=0;unknowns=0;Target=comp155887_c1_seq1 1681 17 .;CDS_Target=comp155887_c1_seq1 1532 204 .;locus=RLOC_00011314
Chr1	stalkie_big_nohaplotig	exon	131814046	131815710	99	-	.	Parent=comp155887_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	131814195	131815523	.	-	0	Parent=comp155887_c1_seq1.mrna1
Chr1	gffcl	locus	131821252	131823471	.	+	.	ID=RLOC_00011315;geneIDs=comp158875_c0_seq1.path1;transcripts=comp158875_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131821252	131823471	.	+	.	ID=comp158875_c0_seq1.mrna1;geneID=comp158875_c0_seq1.path1;Name=comp158875_c0_seq1;Dir=antisensecoverage=98.8;identity=95.3;matches=814;mismatches=21;indels=19;unknowns=0;locus=RLOC_00011315
Chr1	stalkie_big_nohaplotig	exon	131821252	131821452	99	+	.	Parent=comp158875_c0_seq1.mrna1;Target=comp158875_c0_seq1 648 848 -
Chr1	stalkie_big_nohaplotig	exon	131822649	131822721	100	+	.	Parent=comp158875_c0_seq1.mrna1;Target=comp158875_c0_seq1 575 647 -
Chr1	stalkie_big_nohaplotig	exon	131822834	131822883	94	+	.	Parent=comp158875_c0_seq1.mrna1;Target=comp158875_c0_seq1 523 574 -
Chr1	stalkie_big_nohaplotig	exon	131822945	131823471	93	+	.	Parent=comp158875_c0_seq1.mrna1;Target=comp158875_c0_seq1 11 522 -
Chr1	stalkie_big_nohaplotig	CDS	131821405	131821452	.	+	0	Parent=comp158875_c0_seq1.mrna1;Target=comp158875_c0_seq1 648 695 .
Chr1	stalkie_big_nohaplotig	CDS	131822649	131822721	.	+	0	Parent=comp158875_c0_seq1.mrna1;Target=comp158875_c0_seq1 575 647 .
Chr1	stalkie_big_nohaplotig	CDS	131822834	131822838	.	+	2	Parent=comp158875_c0_seq1.mrna1;Target=comp158875_c0_seq1 570 574 .
Chr1	gffcl	locus	131837270	131846911	.	+	.	ID=RLOC_00011316;geneIDs=comp147251_c0_seq1.path1;transcripts=comp147251_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131837270	131846911	.	+	.	ID=comp147251_c0_seq1.mrna1;geneID=comp147251_c0_seq1.path1;Name=comp147251_c0_seq1;Dir=antisensecoverage=99.9;identity=98.2;matches=1625;mismatches=21;indels=8;unknowns=0;locus=RLOC_00011316
Chr1	stalkie_big_nohaplotig	exon	131837270	131838309	98	+	.	Parent=comp147251_c0_seq1.mrna1;Target=comp147251_c0_seq1 607 1652 -
Chr1	stalkie_big_nohaplotig	exon	131838477	131839045	97	+	.	Parent=comp147251_c0_seq1.mrna1;Target=comp147251_c0_seq1 40 606 -
Chr1	stalkie_big_nohaplotig	exon	131846873	131846911	94	+	.	Parent=comp147251_c0_seq1.mrna1;Target=comp147251_c0_seq1 1 39 -
Chr1	stalkie_big_nohaplotig	CDS	131838298	131838309	.	+	0	Parent=comp147251_c0_seq1.mrna1;Target=comp147251_c0_seq1 607 618 .
Chr1	stalkie_big_nohaplotig	CDS	131838477	131838659	.	+	0	Parent=comp147251_c0_seq1.mrna1;Target=comp147251_c0_seq1 424 606 .
Chr1	gffcl	locus	131856607	131857590	.	-	.	ID=RLOC_00011317;geneIDs=ORF2142.path1;transcripts=ORF2142.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131856607	131857590	.	-	.	ID=ORF2142.mrna1;geneID=ORF2142.path1;Name=ORF2142;Dir=sensecoverage=100.0;identity=99.1;matches=901;mismatches=8;indels=0;unknowns=0;locus=RLOC_00011317
Chr1	stalkie_big_nohaplotig	exon	131856607	131856664	98	-	.	Parent=ORF2142.mrna1;Target=ORF2142 852 909 +
Chr1	stalkie_big_nohaplotig	exon	131856740	131857590	99	-	.	Parent=ORF2142.mrna1;Target=ORF2142 1 851 +
Chr1	stalkie_big_nohaplotig	CDS	131856607	131856664	.	-	1	Parent=ORF2142.mrna1;Target=ORF2142 852 909 +
Chr1	stalkie_big_nohaplotig	CDS	131856740	131857590	.	-	0	Parent=ORF2142.mrna1;Target=ORF2142 1 851 +
Chr1	gffcl	locus	131914010	131915228	.	-	.	ID=RLOC_00011319;geneIDs=Dv_FBgn0209645.2.path1,comp163741_c0_seq1.path3;transcripts=comp163741_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	131914010	131915228	.	-	.	ID=comp163741_c0_seq1.mrna3;geneID=comp163741_c0_seq1.path3;Name=comp163741_c0_seq1;Dir=sensecoverage=100.0;identity=97.8;matches=1139;mismatches=25;indels=1;unknowns=0;Target=comp163741_c0_seq1 38 220 +;locus=RLOC_00011319
Chr1	stalkie_big_nohaplotig	exon	131914010	131915143	97	-	.	Parent=comp163741_c0_seq1.mrna3;Target=comp163741_c0_seq1 31 1165 +
Chr1	stalkie_big_nohaplotig	exon	131915199	131915228	100	-	.	Parent=comp163741_c0_seq1.mrna3;Target=comp163741_c0_seq1 1 30 +
Chr1	stalkie_big_nohaplotig	CDS	131914954	131915136	.	-	0	Parent=comp163741_c0_seq1.mrna3
Chr1	gffcl	locus	131932894	131934240	.	-	.	ID=RLOC_00011320;geneIDs=FBgn0036791.1.path1;transcripts=FBgn0036791.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	131932894	131934240	.	-	.	ID=FBgn0036791.1.mrna1;geneID=FBgn0036791.1.path1;Name=FBgn0036791.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1342;mismatches=5;indels=0;unknowns=0;Target=FBgn0036791.1 1347 1 .;locus=RLOC_00011320
Chr1	stalkie_big_nohaplotig	exon	131932894	131934240	99	-	.	Parent=FBgn0036791.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	131932894	131934240	.	-	0	Parent=FBgn0036791.1.mrna1
Chr1	gffcl	locus	131937091	131937588	.	-	.	ID=RLOC_00011321;geneIDs=comp147212_c0_seq1.path2;transcripts=comp147212_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	131937091	131937588	.	-	.	ID=comp147212_c0_seq1.mrna2;geneID=comp147212_c0_seq1.path2;Name=comp147212_c0_seq1;Dir=indeterminatecoverage=88.6;identity=93.4;matches=465;mismatches=31;indels=2;unknowns=0;Target=comp147212_c0_seq1 545 50 .;CDS_Target=comp147212_c0_seq1 289 152 .;locus=RLOC_00011321
Chr1	stalkie_big_nohaplotig	exon	131937091	131937588	93	-	.	Parent=comp147212_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	131937348	131937486	.	-	0	Parent=comp147212_c0_seq1.mrna2
Chr1	gffcl	locus	131956389	131956660	.	+	.	ID=RLOC_00011323;geneIDs=comp115845_c0_seq1.path2;transcripts=comp115845_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	131956389	131956660	.	+	.	ID=comp115845_c0_seq1.mrna2;geneID=comp115845_c0_seq1.path2;Name=comp115845_c0_seq1;Dir=indeterminatecoverage=85.2;identity=87.9;matches=239;mismatches=32;indels=1;unknowns=0;Target=comp115845_c0_seq1 271 1 .;CDS_Target=comp115845_c0_seq1 38 3 .;locus=RLOC_00011323
Chr1	stalkie_big_nohaplotig	exon	131956389	131956660	87	+	.	Parent=comp115845_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	131956391	131956426	.	+	0	Parent=comp115845_c0_seq1.mrna2
Chr1	gffcl	locus	132001647	132005577	.	-	.	ID=RLOC_00011324;geneIDs=comp142394_c0_seq1.path2;transcripts=comp142394_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	132001647	132005577	.	-	.	ID=comp142394_c0_seq1.mrna2;geneID=comp142394_c0_seq1.path2;Name=comp142394_c0_seq1;Dir=antisensecoverage=12.5;identity=100.0;matches=160;mismatches=0;indels=0;unknowns=0;Target=comp142394_c0_seq1 1117 1168 .;locus=RLOC_00011324
Chr1	stalkie_big_nohaplotig	exon	132001647	132001744	100	-	.	Parent=comp142394_c0_seq1.mrna2;Target=comp142394_c0_seq1 1117 1214 -
Chr1	stalkie_big_nohaplotig	exon	132005516	132005577	100	-	.	Parent=comp142394_c0_seq1.mrna2;Target=comp142394_c0_seq1 1215 1276 -
Chr1	stalkie_big_nohaplotig	CDS	132001647	132001698	.	-	0	Parent=comp142394_c0_seq1.mrna2
Chr1	gffcl	locus	132018778	132019700	.	-	.	ID=RLOC_00011325;geneIDs=ORF3031.path1;transcripts=ORF3031.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132018778	132019700	.	-	.	ID=ORF3031.mrna1;geneID=ORF3031.path1;Name=ORF3031;Dir=sensecoverage=98.7;identity=98.3;matches=754;mismatches=13;indels=0;unknowns=0;locus=RLOC_00011325
Chr1	stalkie_big_nohaplotig	exon	132018778	132019040	97	-	.	Parent=ORF3031.mrna1;Target=ORF3031 515 777 +
Chr1	stalkie_big_nohaplotig	exon	132019155	132019190	100	-	.	Parent=ORF3031.mrna1;Target=ORF3031 479 514 +
Chr1	stalkie_big_nohaplotig	exon	132019233	132019700	98	-	.	Parent=ORF3031.mrna1;Target=ORF3031 11 478 +
Chr1	stalkie_big_nohaplotig	CDS	132018778	132019040	.	-	2	Parent=ORF3031.mrna1;Target=ORF3031 515 777 +
Chr1	stalkie_big_nohaplotig	CDS	132019155	132019190	.	-	2	Parent=ORF3031.mrna1;Target=ORF3031 479 514 +
Chr1	stalkie_big_nohaplotig	CDS	132019233	132019698	.	-	0	Parent=ORF3031.mrna1;Target=ORF3031 13 478 +
Chr1	gffcl	locus	132038440	132039025	.	+	.	ID=RLOC_00011326;geneIDs=comp151251_c0_seq1.path1;transcripts=comp151251_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132038440	132039025	.	+	.	ID=comp151251_c0_seq1.mrna1;geneID=comp151251_c0_seq1.path1;Name=comp151251_c0_seq1;Dir=indeterminatecoverage=97.3;identity=99.0;matches=580;mismatches=6;indels=0;unknowns=0;Target=comp151251_c0_seq1 587 2 .;CDS_Target=comp151251_c0_seq1 493 218 .;locus=RLOC_00011326
Chr1	stalkie_big_nohaplotig	exon	132038440	132039025	98	+	.	Parent=comp151251_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	132038656	132038931	.	+	0	Parent=comp151251_c0_seq1.mrna1
Chr1	gffcl	locus	132039128	132039475	.	-	.	ID=RLOC_00011327;geneIDs=comp116833_c0_seq1.path1;transcripts=comp116833_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132039128	132039475	.	-	.	ID=comp116833_c0_seq1.mrna1;geneID=comp116833_c0_seq1.path1;Name=comp116833_c0_seq1;Dir=sensecoverage=100.0;identity=97.8;matches=261;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011327
Chr1	stalkie_big_nohaplotig	exon	132039128	132039342	97	-	.	Parent=comp116833_c0_seq1.mrna1;Target=comp116833_c0_seq1 53 267 +
Chr1	stalkie_big_nohaplotig	exon	132039424	132039475	100	-	.	Parent=comp116833_c0_seq1.mrna1;Target=comp116833_c0_seq1 1 52 +
Chr1	stalkie_big_nohaplotig	CDS	132039130	132039342	.	-	0	Parent=comp116833_c0_seq1.mrna1;Target=comp116833_c0_seq1 53 265 +
Chr1	stalkie_big_nohaplotig	CDS	132039424	132039429	.	-	0	Parent=comp116833_c0_seq1.mrna1;Target=comp116833_c0_seq1 47 52 +
Chr1	gffcl	locus	132058447	132058765	.	+	.	ID=RLOC_00011328;geneIDs=comp560307_c0_seq1.path1;transcripts=comp560307_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132058447	132058765	.	+	.	ID=comp560307_c0_seq1.mrna1;geneID=comp560307_c0_seq1.path1;Name=comp560307_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=319;mismatches=0;indels=0;unknowns=0;Target=comp560307_c0_seq1 319 1 .;CDS_Target=comp560307_c0_seq1 77 3 .;locus=RLOC_00011328
Chr1	stalkie_big_nohaplotig	exon	132058447	132058765	100	+	.	Parent=comp560307_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	132058449	132058523	.	+	0	Parent=comp560307_c0_seq1.mrna1
Chr1	gffcl	locus	132108389	132109669	.	-	.	ID=RLOC_00011329;geneIDs=comp157595_c0_seq1.path1;transcripts=comp157595_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132108389	132109669	.	-	.	ID=comp157595_c0_seq1.mrna1;geneID=comp157595_c0_seq1.path1;Name=comp157595_c0_seq1;Dir=indeterminatecoverage=98.6;identity=99.8;matches=1279;mismatches=2;indels=1;unknowns=0;Target=comp157595_c0_seq1 1282 1 .;CDS_Target=comp157595_c0_seq1 497 201 .;locus=RLOC_00011329
Chr1	stalkie_big_nohaplotig	exon	132108389	132109669	99	-	.	Parent=comp157595_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	132109173	132109469	.	-	0	Parent=comp157595_c0_seq1.mrna1
Chr1	gffcl	locus	132110417	132111033	.	+	.	ID=RLOC_00011330;geneIDs=comp147082_c0_seq1.path1;transcripts=comp147082_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132110417	132111033	.	+	.	ID=comp147082_c0_seq1.mrna1;geneID=comp147082_c0_seq1.path1;Name=comp147082_c0_seq1;Dir=indeterminatecoverage=96.4;identity=98.7;matches=609;mismatches=6;indels=2;unknowns=0;Target=comp147082_c0_seq1 638 24 .;CDS_Target=comp147082_c0_seq1 265 248 .;locus=RLOC_00011330
Chr1	stalkie_big_nohaplotig	exon	132110417	132111033	98	+	.	Parent=comp147082_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	132110643	132110660	.	+	0	Parent=comp147082_c0_seq1.mrna1
Chr1	gffcl	locus	132113351	132115875	.	-	.	ID=RLOC_00011331;geneIDs=comp161994_c1_seq1.path1;transcripts=comp161994_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132113351	132115875	.	-	.	ID=comp161994_c1_seq1.mrna1;geneID=comp161994_c1_seq1.path1;Name=comp161994_c1_seq1;Dir=indeterminatecoverage=99.9;identity=94.7;matches=2426;mismatches=90;indels=45;unknowns=0;Target=comp161994_c1_seq1 2553 2 .;CDS_Target=comp161994_c1_seq1 1043 906 .;locus=RLOC_00011331
Chr1	stalkie_big_nohaplotig	exon	132113351	132115875	94	-	.	Parent=comp161994_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	132114833	132114974	.	-	0	Parent=comp161994_c1_seq1.mrna1
Chr1	gffcl	locus	132116342	132117783	.	+	.	ID=RLOC_00011332;geneIDs=comp155271_c0_seq1.path1;transcripts=comp155271_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132116342	132117783	.	+	.	ID=comp155271_c0_seq1.mrna1;geneID=comp155271_c0_seq1.path1;Name=comp155271_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1431;mismatches=11;indels=1;unknowns=0;Target=comp155271_c0_seq1 1443 1 .;CDS_Target=comp155271_c0_seq1 1442 1263 .;locus=RLOC_00011332
Chr1	stalkie_big_nohaplotig	exon	132116342	132117783	99	+	.	Parent=comp155271_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	132117603	132117782	.	+	0	Parent=comp155271_c0_seq1.mrna1
Chr1	gffcl	locus	132127245	132127552	.	-	.	ID=RLOC_00011333;geneIDs=comp135886_c0_seq1.path1;transcripts=comp135886_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132127245	132127552	.	-	.	ID=comp135886_c0_seq1.mrna1;geneID=comp135886_c0_seq1.path1;Name=comp135886_c0_seq1;Dir=indeterminatecoverage=93.6;identity=99.7;matches=307;mismatches=1;indels=0;unknowns=0;Target=comp135886_c0_seq1 329 22 .;CDS_Target=comp135886_c0_seq1 103 23 .;locus=RLOC_00011333
Chr1	stalkie_big_nohaplotig	exon	132127245	132127552	99	-	.	Parent=comp135886_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	132127471	132127551	.	-	0	Parent=comp135886_c0_seq1.mrna1
Chr1	gffcl	locus	132145583	132146458	.	-	.	ID=RLOC_00011334;geneIDs=ORF3041.path1;transcripts=ORF3041.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132145583	132146458	.	-	.	ID=ORF3041.mrna1;geneID=ORF3041.path1;Name=ORF3041;Dir=sensecoverage=98.2;identity=99.0;matches=755;mismatches=8;indels=0;unknowns=0;locus=RLOC_00011334
Chr1	stalkie_big_nohaplotig	exon	132145583	132145600	100	-	.	Parent=ORF3041.mrna1;Target=ORF3041 760 777 +
Chr1	stalkie_big_nohaplotig	exon	132145654	132145920	100	-	.	Parent=ORF3041.mrna1;Target=ORF3041 493 759 +
Chr1	stalkie_big_nohaplotig	exon	132145981	132146458	98	-	.	Parent=ORF3041.mrna1;Target=ORF3041 15 492 +
Chr1	stalkie_big_nohaplotig	CDS	132145583	132145600	.	-	0	Parent=ORF3041.mrna1;Target=ORF3041 760 777 +
Chr1	stalkie_big_nohaplotig	CDS	132145654	132145920	.	-	0	Parent=ORF3041.mrna1;Target=ORF3041 493 759 +
Chr1	stalkie_big_nohaplotig	CDS	132145981	132146457	.	-	0	Parent=ORF3041.mrna1;Target=ORF3041 16 492 +
Chr1	gffcl	locus	132183324	132184679	.	+	.	ID=RLOC_00011335;geneIDs=FBgn0036810.2.path1;transcripts=FBgn0036810.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132183324	132184679	.	+	.	ID=FBgn0036810.2.mrna1;geneID=FBgn0036810.2.path1;Name=FBgn0036810.2;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1342;mismatches=14;indels=0;unknowns=0;Target=FBgn0036810.2 1356 1 .;locus=RLOC_00011335
Chr1	stalkie_big_nohaplotig	exon	132183324	132184679	98	+	.	Parent=FBgn0036810.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	132183324	132184679	.	+	0	Parent=FBgn0036810.2.mrna1
Chr1	gffcl	locus	132195586	132195891	.	+	.	ID=RLOC_00011336;geneIDs=comp135886_c0_seq1.path2;transcripts=comp135886_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	132195586	132195891	.	+	.	ID=comp135886_c0_seq1.mrna2;geneID=comp135886_c0_seq1.path2;Name=comp135886_c0_seq1;Dir=indeterminatecoverage=93.9;identity=98.1;matches=303;mismatches=3;indels=3;unknowns=0;Target=comp135886_c0_seq1 329 21 .;CDS_Target=comp135886_c0_seq1 103 23 .;locus=RLOC_00011336
Chr1	stalkie_big_nohaplotig	exon	132195586	132195891	98	+	.	Parent=comp135886_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	132195588	132195668	.	+	0	Parent=comp135886_c0_seq1.mrna2
Chr1	gffcl	locus	132209578	132212813	.	+	.	ID=RLOC_00011337;geneIDs=comp159472_c0_seq1.path1;transcripts=comp159472_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132209578	132212813	.	+	.	ID=comp159472_c0_seq1.mrna1;geneID=comp159472_c0_seq1.path1;Name=comp159472_c0_seq1;Dir=sensecoverage=99.1;identity=92.1;matches=1417;mismatches=87;indels=34;unknowns=0;locus=RLOC_00011337
Chr1	stalkie_big_nohaplotig	exon	132209578	132209713	97	+	.	Parent=comp159472_c0_seq1.mrna1;Target=comp159472_c0_seq1 2 137 +
Chr1	stalkie_big_nohaplotig	exon	132210344	132210551	99	+	.	Parent=comp159472_c0_seq1.mrna1;Target=comp159472_c0_seq1 138 345 +
Chr1	stalkie_big_nohaplotig	exon	132210906	132210977	98	+	.	Parent=comp159472_c0_seq1.mrna1;Target=comp159472_c0_seq1 346 417 +
Chr1	stalkie_big_nohaplotig	exon	132211631	132212367	95	+	.	Parent=comp159472_c0_seq1.mrna1;Target=comp159472_c0_seq1 418 1154 +
Chr1	stalkie_big_nohaplotig	exon	132212436	132212813	78	+	.	Parent=comp159472_c0_seq1.mrna1;Target=comp159472_c0_seq1 1155 1512 +
Chr1	stalkie_big_nohaplotig	CDS	132212158	132212367	.	+	0	Parent=comp159472_c0_seq1.mrna1;Target=comp159472_c0_seq1 945 1154 +
Chr1	stalkie_big_nohaplotig	CDS	132212436	132212555	.	+	0	Parent=comp159472_c0_seq1.mrna1;Target=comp159472_c0_seq1 1155 1253 +
Chr1	gffcl	locus	132240865	132242057	.	+	.	ID=RLOC_00011338;geneIDs=FBgn0036810.1.path1;transcripts=FBgn0036810.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132240865	132242057	.	+	.	ID=FBgn0036810.1.mrna1;geneID=FBgn0036810.1.path1;Name=FBgn0036810.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1187;mismatches=6;indels=1;unknowns=0;Target=FBgn0036810.1 1194 1 .;CDS_Target=FBgn0036810.1 1194 277 .;locus=RLOC_00011338
Chr1	stalkie_big_nohaplotig	exon	132240865	132242057	99	+	.	Parent=FBgn0036810.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	132241140	132242057	.	+	0	Parent=FBgn0036810.1.mrna1
Chr1	gffcl	locus	132245656	132246849	.	-	.	ID=RLOC_00011339;geneIDs=FBgn0036810.1.path2;transcripts=FBgn0036810.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	132245656	132246849	.	-	.	ID=FBgn0036810.1.mrna2;geneID=FBgn0036810.1.path2;Name=FBgn0036810.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1184;mismatches=10;indels=0;unknowns=0;Target=FBgn0036810.1 1194 1 .;locus=RLOC_00011339
Chr1	stalkie_big_nohaplotig	exon	132245656	132246849	99	-	.	Parent=FBgn0036810.1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	132245656	132246849	.	-	0	Parent=FBgn0036810.1.mrna2
Chr1	gffcl	locus	132254606	132254898	.	-	.	ID=RLOC_00011340;geneIDs=FBgn0260971.path1;transcripts=FBgn0260971.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132254606	132254898	.	-	.	ID=FBgn0260971.mrna1;geneID=FBgn0260971.path1;Name=FBgn0260971;Dir=indeterminatecoverage=22.9;identity=99.7;matches=292;mismatches=1;indels=0;unknowns=0;Target=FBgn0260971 293 1 .;locus=RLOC_00011340
Chr1	stalkie_big_nohaplotig	exon	132254606	132254898	99	-	.	Parent=FBgn0260971.mrna1
Chr1	stalkie_big_nohaplotig	CDS	132254606	132254898	.	-	0	Parent=FBgn0260971.mrna1
Chr1	gffcl	locus	132295412	132295913	.	+	.	ID=RLOC_00011341;geneIDs=comp94753_c0_seq1.path1;transcripts=comp94753_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132295412	132295913	.	+	.	ID=comp94753_c0_seq1.mrna1;geneID=comp94753_c0_seq1.path1;Name=comp94753_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=502;mismatches=0;indels=0;unknowns=0;Target=comp94753_c0_seq1 502 1 .;CDS_Target=comp94753_c0_seq1 262 128 .;locus=RLOC_00011341
Chr1	stalkie_big_nohaplotig	exon	132295412	132295913	100	+	.	Parent=comp94753_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	132295539	132295673	.	+	0	Parent=comp94753_c0_seq1.mrna1
Chr1	gffcl	locus	132298012	132298704	.	+	.	ID=RLOC_00011342;geneIDs=comp152804_c1_seq1.path1;transcripts=comp152804_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132298012	132298704	.	+	.	ID=comp152804_c1_seq1.mrna1;geneID=comp152804_c1_seq1.path1;Name=comp152804_c1_seq1;Dir=indeterminatecoverage=100.0;identity=91.6;matches=677;mismatches=13;indels=49;unknowns=0;Target=comp152804_c1_seq1 736 1 .;CDS_Target=comp152804_c1_seq1 65 3 .;locus=RLOC_00011342
Chr1	stalkie_big_nohaplotig	exon	132298012	132298704	91	+	.	Parent=comp152804_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	132298014	132298076	.	+	0	Parent=comp152804_c1_seq1.mrna1
Chr1	gffcl	locus	132353068	132355726	.	+	.	ID=RLOC_00011343;geneIDs=comp158244_c0_seq1.path1;transcripts=comp158244_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132353068	132355726	.	+	.	ID=comp158244_c0_seq1.mrna1;geneID=comp158244_c0_seq1.path1;Name=comp158244_c0_seq1;Dir=antisensecoverage=99.8;identity=96.9;matches=814;mismatches=12;indels=14;unknowns=61;locus=RLOC_00011343
Chr1	stalkie_big_nohaplotig	exon	132353068	132353225	96	+	.	Parent=comp158244_c0_seq1.mrna1;Target=comp158244_c0_seq1 1219 1377 -
Chr1	stalkie_big_nohaplotig	exon	132353358	132353398	97	+	.	Parent=comp158244_c0_seq1.mrna1;Target=comp158244_c0_seq1 1178 1218 -
Chr1	stalkie_big_nohaplotig	exon	132354086	132354093	100	+	.	Parent=comp158244_c0_seq1.mrna1;Target=comp158244_c0_seq1 1155 1162 -
Chr1	stalkie_big_nohaplotig	exon	132354222	132354229	100	+	.	Parent=comp158244_c0_seq1.mrna1;Target=comp158244_c0_seq1 1126 1133 -
Chr1	stalkie_big_nohaplotig	exon	132354238	132354331	90	+	.	Parent=comp158244_c0_seq1.mrna1;Target=comp158244_c0_seq1 1004 1095 -
Chr1	stalkie_big_nohaplotig	exon	132354860	132354958	90	+	.	Parent=comp158244_c0_seq1.mrna1;Target=comp158244_c0_seq1 912 1003 -
Chr1	stalkie_big_nohaplotig	exon	132355130	132355330	100	+	.	Parent=comp158244_c0_seq1.mrna1;Target=comp158244_c0_seq1 711 911 -
Chr1	stalkie_big_nohaplotig	exon	132355401	132355626	99	+	.	Parent=comp158244_c0_seq1.mrna1;Target=comp158244_c0_seq1 485 710 -
Chr1	stalkie_big_nohaplotig	exon	132355664	132355726	100	+	.	Parent=comp158244_c0_seq1.mrna1;Target=comp158244_c0_seq1 3 65 -
Chr1	stalkie_big_nohaplotig	CDS	132355166	132355330	.	+	0	Parent=comp158244_c0_seq1.mrna1;Target=comp158244_c0_seq1 711 875 .
Chr1	stalkie_big_nohaplotig	CDS	132355401	132355626	.	+	0	Parent=comp158244_c0_seq1.mrna1;Target=comp158244_c0_seq1 485 710 .
Chr1	gffcl	locus	132427286	132463890	.	+	.	ID=RLOC_00011344;geneIDs=FBgn0260971.path2;transcripts=FBgn0260971.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	132427286	132463890	.	+	.	ID=FBgn0260971.mrna2;geneID=FBgn0260971.path2;Name=FBgn0260971;Dir=sensecoverage=77.1;identity=100.0;matches=988;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011344
Chr1	stalkie_big_nohaplotig	exon	132427286	132427295	100	+	.	Parent=FBgn0260971.mrna2;Target=FBgn0260971 295 304 +
Chr1	stalkie_big_nohaplotig	exon	132435386	132435391	100	+	.	Parent=FBgn0260971.mrna2;Target=FBgn0260971 305 310 +
Chr1	stalkie_big_nohaplotig	exon	132455564	132455773	100	+	.	Parent=FBgn0260971.mrna2;Target=FBgn0260971 311 520 +
Chr1	stalkie_big_nohaplotig	exon	132463130	132463890	100	+	.	Parent=FBgn0260971.mrna2;Target=FBgn0260971 521 1281 +
Chr1	stalkie_big_nohaplotig	CDS	132427286	132427295	.	+	0	Parent=FBgn0260971.mrna2;Target=FBgn0260971 295 304 +
Chr1	stalkie_big_nohaplotig	CDS	132435386	132435391	.	+	2	Parent=FBgn0260971.mrna2;Target=FBgn0260971 305 310 +
Chr1	stalkie_big_nohaplotig	CDS	132455564	132455773	.	+	2	Parent=FBgn0260971.mrna2;Target=FBgn0260971 311 520 +
Chr1	stalkie_big_nohaplotig	CDS	132463130	132463890	.	+	2	Parent=FBgn0260971.mrna2;Target=FBgn0260971 521 1281 +
Chr1	gffcl	locus	132465023	132465671	.	+	.	ID=RLOC_00011345;geneIDs=comp150343_c0_seq1.path1;transcripts=comp150343_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132465023	132465671	.	+	.	ID=comp150343_c0_seq1.mrna1;geneID=comp150343_c0_seq1.path1;Name=comp150343_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=646;mismatches=3;indels=0;unknowns=0;Target=comp150343_c0_seq1 649 1 .;CDS_Target=comp150343_c0_seq1 317 225 .;locus=RLOC_00011345
Chr1	stalkie_big_nohaplotig	exon	132465023	132465671	99	+	.	Parent=comp150343_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	132465247	132465339	.	+	0	Parent=comp150343_c0_seq1.mrna1
Chr1	gffcl	locus	132469827	132472219	.	+	.	ID=RLOC_00011346;geneIDs=FBgn0015805.2.path1;transcripts=FBgn0015805.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132469827	132472219	.	+	.	ID=FBgn0015805.2.mrna1;geneID=FBgn0015805.2.path1;Name=FBgn0015805.2;Dir=sensecoverage=100.0;identity=98.3;matches=1241;mismatches=22;indels=0;unknowns=0;locus=RLOC_00011346
Chr1	stalkie_big_nohaplotig	exon	132469827	132469967	94	+	.	Parent=FBgn0015805.2.mrna1;Target=FBgn0015805.2 1 141 +
Chr1	stalkie_big_nohaplotig	exon	132470038	132470554	98	+	.	Parent=FBgn0015805.2.mrna1;Target=FBgn0015805.2 142 658 +
Chr1	stalkie_big_nohaplotig	exon	132470628	132470820	99	+	.	Parent=FBgn0015805.2.mrna1;Target=FBgn0015805.2 659 851 +
Chr1	stalkie_big_nohaplotig	exon	132471752	132472131	98	+	.	Parent=FBgn0015805.2.mrna1;Target=FBgn0015805.2 852 1231 +
Chr1	stalkie_big_nohaplotig	exon	132472188	132472219	100	+	.	Parent=FBgn0015805.2.mrna1;Target=FBgn0015805.2 1232 1263 +
Chr1	stalkie_big_nohaplotig	CDS	132469887	132469967	.	+	0	Parent=FBgn0015805.2.mrna1;Target=FBgn0015805.2 61 141 +
Chr1	stalkie_big_nohaplotig	CDS	132470038	132470554	.	+	0	Parent=FBgn0015805.2.mrna1;Target=FBgn0015805.2 142 658 +
Chr1	stalkie_big_nohaplotig	CDS	132470628	132470820	.	+	2	Parent=FBgn0015805.2.mrna1;Target=FBgn0015805.2 659 851 +
Chr1	stalkie_big_nohaplotig	CDS	132471752	132472131	.	+	1	Parent=FBgn0015805.2.mrna1;Target=FBgn0015805.2 852 1231 +
Chr1	stalkie_big_nohaplotig	CDS	132472188	132472219	.	+	2	Parent=FBgn0015805.2.mrna1;Target=FBgn0015805.2 1232 1263 +
Chr1	gffcl	locus	132473063	132473554	.	-	.	ID=RLOC_00011347;geneIDs=comp139497_c1_seq1.path1;transcripts=comp139497_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132473063	132473554	.	-	.	ID=comp139497_c1_seq1.mrna1;geneID=comp139497_c1_seq1.path1;Name=comp139497_c1_seq1;Dir=indeterminatecoverage=100.0;identity=91.4;matches=459;mismatches=24;indels=19;unknowns=0;Target=comp139497_c1_seq1 493 1 .;CDS_Target=comp139497_c1_seq1 294 166 .;locus=RLOC_00011347
Chr1	stalkie_big_nohaplotig	exon	132473063	132473554	91	-	.	Parent=comp139497_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	132473263	132473391	.	-	0	Parent=comp139497_c1_seq1.mrna1
Chr1	gffcl	locus	132477751	132479002	.	+	.	ID=RLOC_00011348;geneIDs=FBgn0029733.1.path1;transcripts=FBgn0029733.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132477751	132479002	.	+	.	ID=FBgn0029733.1.mrna1;geneID=FBgn0029733.1.path1;Name=FBgn0029733.1;Dir=sensecoverage=99.7;identity=99.9;matches=1124;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011348
Chr1	stalkie_big_nohaplotig	exon	132477751	132478225	99	+	.	Parent=FBgn0029733.1.mrna1;Target=FBgn0029733.1 1 475 +
Chr1	stalkie_big_nohaplotig	exon	132478287	132478793	100	+	.	Parent=FBgn0029733.1.mrna1;Target=FBgn0029733.1 476 982 +
Chr1	stalkie_big_nohaplotig	exon	132478860	132479002	100	+	.	Parent=FBgn0029733.1.mrna1;Target=FBgn0029733.1 983 1125 +
Chr1	stalkie_big_nohaplotig	CDS	132477751	132478225	.	+	0	Parent=FBgn0029733.1.mrna1;Target=FBgn0029733.1 1 475 +
Chr1	stalkie_big_nohaplotig	CDS	132478287	132478793	.	+	2	Parent=FBgn0029733.1.mrna1;Target=FBgn0029733.1 476 982 +
Chr1	stalkie_big_nohaplotig	CDS	132478860	132479002	.	+	2	Parent=FBgn0029733.1.mrna1;Target=FBgn0029733.1 983 1125 +
Chr1	gffcl	locus	132483314	132483897	.	-	.	ID=RLOC_00011349;geneIDs=FBgn0036847.1.path1;transcripts=FBgn0036847.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132483314	132483897	.	-	.	ID=FBgn0036847.1.mrna1;geneID=FBgn0036847.1.path1;Name=FBgn0036847.1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=579;mismatches=5;indels=1;unknowns=0;Target=FBgn0036847.1 585 1 .;CDS_Target=FBgn0036847.1 35 3 .;locus=RLOC_00011349
Chr1	stalkie_big_nohaplotig	exon	132483314	132483897	98	-	.	Parent=FBgn0036847.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	132483864	132483895	.	-	0	Parent=FBgn0036847.1.mrna1
Chr1	gffcl	locus	132487207	132650738	.	+	.	ID=RLOC_00011350;geneIDs=comp159658_c2_seq1.path1;transcripts=comp159658_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132487207	132650738	.	+	.	ID=comp159658_c2_seq1.mrna1;geneID=comp159658_c2_seq1.path1;Name=comp159658_c2_seq1;Dir=antisensecoverage=98.6;identity=98.4;matches=1879;mismatches=29;indels=1;unknowns=0;locus=RLOC_00011350
Chr1	stalkie_big_nohaplotig	exon	132487207	132487466	98	+	.	Parent=comp159658_c2_seq1.mrna1;Target=comp159658_c2_seq1 1677 1937 -
Chr1	stalkie_big_nohaplotig	exon	132487542	132487635	94	+	.	Parent=comp159658_c2_seq1.mrna1;Target=comp159658_c2_seq1 1583 1676 -
Chr1	stalkie_big_nohaplotig	exon	132488227	132488320	98	+	.	Parent=comp159658_c2_seq1.mrna1;Target=comp159658_c2_seq1 1489 1582 -
Chr1	stalkie_big_nohaplotig	exon	132489081	132489227	100	+	.	Parent=comp159658_c2_seq1.mrna1;Target=comp159658_c2_seq1 1342 1488 -
Chr1	stalkie_big_nohaplotig	exon	132489282	132489463	100	+	.	Parent=comp159658_c2_seq1.mrna1;Target=comp159658_c2_seq1 1160 1341 -
Chr1	stalkie_big_nohaplotig	exon	132489548	132489583	100	+	.	Parent=comp159658_c2_seq1.mrna1;Target=comp159658_c2_seq1 1124 1159 -
Chr1	stalkie_big_nohaplotig	exon	132649544	132649777	98	+	.	Parent=comp159658_c2_seq1.mrna1;Target=comp159658_c2_seq1 890 1123 -
Chr1	stalkie_big_nohaplotig	exon	132649878	132650738	98	+	.	Parent=comp159658_c2_seq1.mrna1;Target=comp159658_c2_seq1 29 889 -
Chr1	stalkie_big_nohaplotig	CDS	132489299	132489463	.	+	0	Parent=comp159658_c2_seq1.mrna1;Target=comp159658_c2_seq1 1160 1324 .
Chr1	stalkie_big_nohaplotig	CDS	132489548	132489583	.	+	0	Parent=comp159658_c2_seq1.mrna1;Target=comp159658_c2_seq1 1124 1159 .
Chr1	stalkie_big_nohaplotig	CDS	132649544	132649777	.	+	0	Parent=comp159658_c2_seq1.mrna1;Target=comp159658_c2_seq1 890 1123 .
Chr1	stalkie_big_nohaplotig	CDS	132649878	132649970	.	+	0	Parent=comp159658_c2_seq1.mrna1;Target=comp159658_c2_seq1 797 889 .
Chr1	gffcl	locus	132498834	132579849	.	-	.	ID=RLOC_00011351;geneIDs=comp156886_c0_seq1.path1;transcripts=comp156886_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132498834	132579849	.	-	.	ID=comp156886_c0_seq1.mrna1;geneID=comp156886_c0_seq1.path1;Name=comp156886_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=960;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011351
Chr1	stalkie_big_nohaplotig	exon	132498834	132499009	100	-	.	Parent=comp156886_c0_seq1.mrna1;Target=comp156886_c0_seq1 1 176 -
Chr1	stalkie_big_nohaplotig	exon	132547658	132547866	100	-	.	Parent=comp156886_c0_seq1.mrna1;Target=comp156886_c0_seq1 177 385 -
Chr1	stalkie_big_nohaplotig	exon	132564192	132564239	100	-	.	Parent=comp156886_c0_seq1.mrna1;Target=comp156886_c0_seq1 386 433 -
Chr1	stalkie_big_nohaplotig	exon	132579319	132579849	99	-	.	Parent=comp156886_c0_seq1.mrna1;Target=comp156886_c0_seq1 434 964 -
Chr1	stalkie_big_nohaplotig	CDS	132498836	132499009	.	-	0	Parent=comp156886_c0_seq1.mrna1;Target=comp156886_c0_seq1 3 176 .
Chr1	stalkie_big_nohaplotig	CDS	132547658	132547866	.	-	2	Parent=comp156886_c0_seq1.mrna1;Target=comp156886_c0_seq1 177 385 .
Chr1	stalkie_big_nohaplotig	CDS	132564192	132564239	.	-	2	Parent=comp156886_c0_seq1.mrna1;Target=comp156886_c0_seq1 386 433 .
Chr1	stalkie_big_nohaplotig	CDS	132579319	132579814	.	-	0	Parent=comp156886_c0_seq1.mrna1;Target=comp156886_c0_seq1 434 929 .
Chr1	gffcl	locus	132513002	132514335	.	+	.	ID=RLOC_00011352;geneIDs=ORF1018.path1;transcripts=ORF1018.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132513002	132514335	.	+	.	ID=ORF1018.mrna1;geneID=ORF1018.path1;Name=ORF1018;Dir=sensecoverage=100.0;identity=100.0;matches=1278;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011352
Chr1	stalkie_big_nohaplotig	exon	132513002	132513508	100	+	.	Parent=ORF1018.mrna1;Target=ORF1018 1 507 +
Chr1	stalkie_big_nohaplotig	exon	132513565	132514335	100	+	.	Parent=ORF1018.mrna1;Target=ORF1018 508 1278 +
Chr1	stalkie_big_nohaplotig	CDS	132513002	132513508	.	+	0	Parent=ORF1018.mrna1;Target=ORF1018 1 507 +
Chr1	stalkie_big_nohaplotig	CDS	132513565	132514335	.	+	0	Parent=ORF1018.mrna1;Target=ORF1018 508 1278 +
Chr1	gffcl	locus	132521428	132521627	.	+	.	ID=RLOC_00011353;geneIDs=comp116714_c0_seq1.path1;transcripts=comp116714_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132521428	132521627	.	+	.	ID=comp116714_c0_seq1.mrna1;geneID=comp116714_c0_seq1.path1;Name=comp116714_c0_seq1;Dir=indeterminatecoverage=87.6;identity=85.7;matches=174;mismatches=20;indels=9;unknowns=0;Target=comp116714_c0_seq1 224 28 .;CDS_Target=comp116714_c0_seq1 218 87 .;locus=RLOC_00011353
Chr1	stalkie_big_nohaplotig	exon	132521428	132521627	85	+	.	Parent=comp116714_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	132521487	132521621	.	+	0	Parent=comp116714_c0_seq1.mrna1
Chr1	gffcl	locus	132549164	132550497	.	-	.	ID=RLOC_00011354;geneIDs=ORF1211.path1;transcripts=ORF1211.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132549164	132550497	.	-	.	ID=ORF1211.mrna1;geneID=ORF1211.path1;Name=ORF1211;Dir=sensecoverage=100.0;identity=99.4;matches=1178;mismatches=7;indels=0;unknowns=0;locus=RLOC_00011354
Chr1	stalkie_big_nohaplotig	exon	132549164	132549615	98	-	.	Parent=ORF1211.mrna1;Target=ORF1211 734 1185 +
Chr1	stalkie_big_nohaplotig	exon	132549673	132550003	100	-	.	Parent=ORF1211.mrna1;Target=ORF1211 403 733 +
Chr1	stalkie_big_nohaplotig	exon	132550096	132550497	100	-	.	Parent=ORF1211.mrna1;Target=ORF1211 1 402 +
Chr1	stalkie_big_nohaplotig	CDS	132549164	132549615	.	-	2	Parent=ORF1211.mrna1;Target=ORF1211 734 1185 +
Chr1	stalkie_big_nohaplotig	CDS	132549673	132550003	.	-	0	Parent=ORF1211.mrna1;Target=ORF1211 403 733 +
Chr1	stalkie_big_nohaplotig	CDS	132550096	132550497	.	-	0	Parent=ORF1211.mrna1;Target=ORF1211 1 402 +
Chr1	gffcl	locus	132741958	132752262	.	-	.	ID=RLOC_00011355;geneIDs=FBgn0030894.1.path1;transcripts=FBgn0030894.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132741958	132752262	.	-	.	ID=FBgn0030894.1.mrna1;geneID=FBgn0030894.1.path1;Name=FBgn0030894.1;Dir=sensecoverage=100.0;identity=99.5;matches=1042;mismatches=4;indels=1;unknowns=0;Target=FBgn0030894.1 3 104 +;locus=RLOC_00011355
Chr1	stalkie_big_nohaplotig	exon	132741958	132742074	100	-	.	Parent=FBgn0030894.1.mrna1;Target=FBgn0030894.1 931 1047 +
Chr1	stalkie_big_nohaplotig	exon	132743799	132744011	100	-	.	Parent=FBgn0030894.1.mrna1;Target=FBgn0030894.1 718 930 +
Chr1	stalkie_big_nohaplotig	exon	132744073	132744262	98	-	.	Parent=FBgn0030894.1.mrna1;Target=FBgn0030894.1 528 717 +
Chr1	stalkie_big_nohaplotig	exon	132744332	132744526	99	-	.	Parent=FBgn0030894.1.mrna1;Target=FBgn0030894.1 333 527 +
Chr1	stalkie_big_nohaplotig	exon	132751831	132751989	100	-	.	Parent=FBgn0030894.1.mrna1;Target=FBgn0030894.1 174 332 +
Chr1	stalkie_big_nohaplotig	exon	132752091	132752262	99	-	.	Parent=FBgn0030894.1.mrna1;Target=FBgn0030894.1 1 173 +
Chr1	stalkie_big_nohaplotig	CDS	132752160	132752260	.	-	0	Parent=FBgn0030894.1.mrna1
Chr1	gffcl	locus	132957676	132958554	.	-	.	ID=RLOC_00011356;geneIDs=comp151825_c0_seq1.path1;transcripts=comp151825_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	132957676	132958554	.	-	.	ID=comp151825_c0_seq1.mrna1;geneID=comp151825_c0_seq1.path1;Name=comp151825_c0_seq1;Dir=sensecoverage=98.4;identity=99.0;matches=797;mismatches=8;indels=0;unknowns=0;locus=RLOC_00011356
Chr1	stalkie_big_nohaplotig	exon	132957676	132958326	98	-	.	Parent=comp151825_c0_seq1.mrna1;Target=comp151825_c0_seq1 156 806 +
Chr1	stalkie_big_nohaplotig	exon	132958401	132958554	99	-	.	Parent=comp151825_c0_seq1.mrna1;Target=comp151825_c0_seq1 2 155 +
Chr1	stalkie_big_nohaplotig	CDS	132957880	132958326	.	-	0	Parent=comp151825_c0_seq1.mrna1;Target=comp151825_c0_seq1 156 602 +
Chr1	stalkie_big_nohaplotig	CDS	132958401	132958454	.	-	0	Parent=comp151825_c0_seq1.mrna1;Target=comp151825_c0_seq1 102 155 +
Chr1	gffcl	locus	133271457	133273589	.	-	.	ID=RLOC_00011357;geneIDs=comp155828_c0_seq1.path1;transcripts=comp155828_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133271457	133273589	.	-	.	ID=comp155828_c0_seq1.mrna1;geneID=comp155828_c0_seq1.path1;Name=comp155828_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=1088;mismatches=8;indels=0;unknowns=0;locus=RLOC_00011357
Chr1	stalkie_big_nohaplotig	exon	133271457	133271649	98	-	.	Parent=comp155828_c0_seq1.mrna1;Target=comp155828_c0_seq1 904 1096 +
Chr1	stalkie_big_nohaplotig	exon	133271724	133271988	99	-	.	Parent=comp155828_c0_seq1.mrna1;Target=comp155828_c0_seq1 639 903 +
Chr1	stalkie_big_nohaplotig	exon	133272952	133273589	99	-	.	Parent=comp155828_c0_seq1.mrna1;Target=comp155828_c0_seq1 1 638 +
Chr1	stalkie_big_nohaplotig	CDS	133271457	133271649	.	-	1	Parent=comp155828_c0_seq1.mrna1;Target=comp155828_c0_seq1 904 1096 +
Chr1	stalkie_big_nohaplotig	CDS	133271724	133271988	.	-	2	Parent=comp155828_c0_seq1.mrna1;Target=comp155828_c0_seq1 639 903 +
Chr1	stalkie_big_nohaplotig	CDS	133272952	133273588	.	-	0	Parent=comp155828_c0_seq1.mrna1;Target=comp155828_c0_seq1 2 638 +
Chr1	gffcl	locus	133279408	133279927	.	-	.	ID=RLOC_00011358;geneIDs=comp158276_c0_seq1.path1;transcripts=comp158276_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133279408	133279927	.	-	.	ID=comp158276_c0_seq1.mrna1;geneID=comp158276_c0_seq1.path1;Name=comp158276_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=514;mismatches=6;indels=0;unknowns=0;Target=comp158276_c0_seq1 520 1 .;CDS_Target=comp158276_c0_seq1 417 319 .;locus=RLOC_00011358
Chr1	stalkie_big_nohaplotig	exon	133279408	133279927	98	-	.	Parent=comp158276_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	133279511	133279609	.	-	0	Parent=comp158276_c0_seq1.mrna1
Chr1	gffcl	locus	133281225	133281997	.	-	.	ID=RLOC_00011359;geneIDs=comp156591_c0_seq1.path2;transcripts=comp156591_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	133281225	133281997	.	-	.	ID=comp156591_c0_seq1.mrna2;geneID=comp156591_c0_seq1.path2;Name=comp156591_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=766;mismatches=6;indels=9;unknowns=0;Target=comp156591_c0_seq1 780 1 .;CDS_Target=comp156591_c0_seq1 105 1 .;locus=RLOC_00011359
Chr1	stalkie_big_nohaplotig	exon	133281225	133281997	98	-	.	Parent=comp156591_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	133281900	133281997	.	-	0	Parent=comp156591_c0_seq1.mrna2
Chr1	gffcl	locus	133410756	133789755	.	+	.	ID=RLOC_00011360;geneIDs=ORF2638.path1,ORF2710.path1,FBgn0025835.1.path1,comp163017_c3_seq1.path1;transcripts=comp163017_c3_seq1.mrna1,FBgn0025835.1.mrna1,ORF2710.mrna1,ORF2638.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133410756	133789755	.	+	.	ID=comp163017_c3_seq1.mrna1;geneID=comp163017_c3_seq1.path1;Name=comp163017_c3_seq1;Dir=antisensecoverage=94.5;identity=92.9;matches=3375;mismatches=112;indels=146;unknowns=0;locus=RLOC_00011360
Chr1	stalkie_big_nohaplotig	exon	133410756	133410757	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 4030 4031 -
Chr1	stalkie_big_nohaplotig	exon	133434836	133434844	88	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 4021 4029 -
Chr1	stalkie_big_nohaplotig	exon	133442424	133442432	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 4012 4020 -
Chr1	stalkie_big_nohaplotig	exon	133445126	133445130	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 4007 4011 -
Chr1	stalkie_big_nohaplotig	exon	133458639	133458664	54	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3978 4006 -
Chr1	stalkie_big_nohaplotig	exon	133466966	133466979	85	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3952 3964 -
Chr1	stalkie_big_nohaplotig	exon	133471795	133471798	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3948 3951 -
Chr1	stalkie_big_nohaplotig	exon	133473794	133473833	37	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3930 3947 -
Chr1	stalkie_big_nohaplotig	exon	133474121	133474128	87	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3922 3929 -
Chr1	stalkie_big_nohaplotig	exon	133474346	133474358	76	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3909 3921 -
Chr1	stalkie_big_nohaplotig	exon	133475417	133475421	80	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3904 3908 -
Chr1	stalkie_big_nohaplotig	exon	133481514	133481522	88	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3895 3903 -
Chr1	stalkie_big_nohaplotig	exon	133482316	133482326	72	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3884 3894 -
Chr1	stalkie_big_nohaplotig	exon	133486596	133486604	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3875 3883 -
Chr1	stalkie_big_nohaplotig	exon	133493075	133493077	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3872 3874 -
Chr1	stalkie_big_nohaplotig	exon	133500147	133500155	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3840 3848 -
Chr1	stalkie_big_nohaplotig	exon	133503354	133503357	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3806 3809 -
Chr1	stalkie_big_nohaplotig	exon	133506062	133506076	73	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3791 3805 -
Chr1	stalkie_big_nohaplotig	exon	133514058	133514059	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3789 3790 -
Chr1	stalkie_big_nohaplotig	exon	133517364	133517401	58	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3741 3788 -
Chr1	stalkie_big_nohaplotig	exon	133523639	133523644	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3735 3740 -
Chr1	stalkie_big_nohaplotig	exon	133524824	133524828	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3730 3734 -
Chr1	stalkie_big_nohaplotig	exon	133529166	133529177	92	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3717 3729 -
Chr1	stalkie_big_nohaplotig	exon	133539751	133539766	81	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3646 3661 -
Chr1	stalkie_big_nohaplotig	exon	133545603	133545611	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3637 3645 -
Chr1	stalkie_big_nohaplotig	exon	133571533	133571540	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3601 3608 -
Chr1	stalkie_big_nohaplotig	exon	133571549	133571555	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3576 3582 -
Chr1	stalkie_big_nohaplotig	exon	133627420	133627432	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3481 3493 -
Chr1	stalkie_big_nohaplotig	exon	133648154	133648183	60	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3454 3480 -
Chr1	stalkie_big_nohaplotig	exon	133654427	133654447	52	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3443 3453 -
Chr1	stalkie_big_nohaplotig	exon	133654790	133654838	47	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3360 3428 -
Chr1	stalkie_big_nohaplotig	exon	133661239	133661242	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3356 3359 -
Chr1	stalkie_big_nohaplotig	exon	133667273	133667278	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3350 3355 -
Chr1	stalkie_big_nohaplotig	exon	133674371	133674375	80	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3345 3349 -
Chr1	stalkie_big_nohaplotig	exon	133679890	133679892	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3342 3344 -
Chr1	stalkie_big_nohaplotig	exon	133689972	133689985	92	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3328 3341 -
Chr1	stalkie_big_nohaplotig	exon	133695180	133695189	90	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3318 3327 -
Chr1	stalkie_big_nohaplotig	exon	133696181	133696193	92	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3305 3317 -
Chr1	stalkie_big_nohaplotig	exon	133696472	133696477	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3299 3304 -
Chr1	stalkie_big_nohaplotig	exon	133702384	133702388	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3294 3298 -
Chr1	stalkie_big_nohaplotig	exon	133706273	133706285	78	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3280 3293 -
Chr1	stalkie_big_nohaplotig	exon	133708644	133708650	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3273 3279 -
Chr1	stalkie_big_nohaplotig	exon	133719705	133719712	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3263 3270 -
Chr1	stalkie_big_nohaplotig	exon	133719715	133719725	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3223 3233 -
Chr1	stalkie_big_nohaplotig	exon	133721791	133721851	47	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3155 3206 -
Chr1	stalkie_big_nohaplotig	exon	133724694	133724702	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3096 3104 -
Chr1	stalkie_big_nohaplotig	exon	133725723	133725777	50	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 3020 3067 -
Chr1	stalkie_big_nohaplotig	exon	133741081	133741095	24	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 2958 3019 -
Chr1	stalkie_big_nohaplotig	exon	133747973	133747975	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 2955 2957 -
Chr1	stalkie_big_nohaplotig	exon	133761286	133761297	91	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 2922 2933 -
Chr1	stalkie_big_nohaplotig	exon	133777150	133777553	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 2464 2867 -
Chr1	stalkie_big_nohaplotig	exon	133783089	133783267	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 2285 2463 -
Chr1	stalkie_big_nohaplotig	exon	133784685	133784893	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 2076 2284 -
Chr1	stalkie_big_nohaplotig	exon	133784968	133785368	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 1675 2075 -
Chr1	stalkie_big_nohaplotig	exon	133785498	133785577	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 1595 1674 -
Chr1	stalkie_big_nohaplotig	exon	133785797	133786316	99	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 1075 1594 -
Chr1	stalkie_big_nohaplotig	exon	133788525	133788716	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 883 1074 -
Chr1	stalkie_big_nohaplotig	exon	133788797	133789200	100	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 479 882 -
Chr1	stalkie_big_nohaplotig	exon	133789280	133789755	99	+	.	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 1 478 -
Chr1	stalkie_big_nohaplotig	CDS	133777292	133777553	.	+	0	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 2464 2725 .
Chr1	stalkie_big_nohaplotig	CDS	133783089	133783267	.	+	2	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 2285 2463 .
Chr1	stalkie_big_nohaplotig	CDS	133784685	133784893	.	+	0	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 2076 2284 .
Chr1	stalkie_big_nohaplotig	CDS	133784968	133785368	.	+	1	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 1675 2075 .
Chr1	stalkie_big_nohaplotig	CDS	133785498	133785577	.	+	2	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 1595 1674 .
Chr1	stalkie_big_nohaplotig	CDS	133785797	133786006	.	+	0	Parent=comp163017_c3_seq1.mrna1;Target=comp163017_c3_seq1 1385 1594 .
Chr1	stalkie_big_nohaplotig	mRNA	133609268	133789584	.	+	.	ID=FBgn0025835.1.mrna1;geneID=FBgn0025835.1.path1;Name=FBgn0025835.1;Dir=sensecoverage=78.6;identity=96.1;matches=2643;mismatches=38;indels=70;unknowns=0;locus=RLOC_00011360
Chr1	stalkie_big_nohaplotig	exon	133609268	133609275	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 767 774 +
Chr1	stalkie_big_nohaplotig	exon	133609638	133609644	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 775 781 +
Chr1	stalkie_big_nohaplotig	exon	133611039	133611079	51	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 783 840 +
Chr1	stalkie_big_nohaplotig	exon	133616004	133616007	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 841 844 +
Chr1	stalkie_big_nohaplotig	exon	133622910	133622915	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 845 850 +
Chr1	stalkie_big_nohaplotig	exon	133623451	133623453	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 851 853 +
Chr1	stalkie_big_nohaplotig	exon	133631157	133631161	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 854 858 +
Chr1	stalkie_big_nohaplotig	exon	133643053	133643055	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 859 861 +
Chr1	stalkie_big_nohaplotig	exon	133645230	133645235	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 862 867 +
Chr1	stalkie_big_nohaplotig	exon	133648611	133648619	88	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 868 876 +
Chr1	stalkie_big_nohaplotig	exon	133656694	133656695	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 877 878 +
Chr1	stalkie_big_nohaplotig	exon	133666623	133666624	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 879 880 +
Chr1	stalkie_big_nohaplotig	exon	133680040	133680042	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 881 883 +
Chr1	stalkie_big_nohaplotig	exon	133695994	133696000	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 884 890 +
Chr1	stalkie_big_nohaplotig	exon	133708323	133708327	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 891 895 +
Chr1	stalkie_big_nohaplotig	exon	133717904	133717910	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 896 902 +
Chr1	stalkie_big_nohaplotig	exon	133725723	133725771	44	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 903 945 +
Chr1	stalkie_big_nohaplotig	exon	133729877	133729887	81	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 946 956 +
Chr1	stalkie_big_nohaplotig	exon	133741086	133741092	12	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 957 1010 +
Chr1	stalkie_big_nohaplotig	exon	133747970	133747976	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 1011 1017 +
Chr1	stalkie_big_nohaplotig	exon	133753883	133753888	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 1047 1052 +
Chr1	stalkie_big_nohaplotig	exon	133758483	133758486	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 1053 1056 +
Chr1	stalkie_big_nohaplotig	exon	133766046	133766047	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 1057 1058 +
Chr1	stalkie_big_nohaplotig	exon	133766407	133766410	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 1059 1062 +
Chr1	stalkie_big_nohaplotig	exon	133769624	133769633	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 1063 1072 +
Chr1	stalkie_big_nohaplotig	exon	133777155	133777553	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 1109 1507 +
Chr1	stalkie_big_nohaplotig	exon	133783089	133783267	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 1508 1686 +
Chr1	stalkie_big_nohaplotig	exon	133784685	133784893	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 1687 1895 +
Chr1	stalkie_big_nohaplotig	exon	133784968	133785368	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 1896 2296 +
Chr1	stalkie_big_nohaplotig	exon	133785498	133785577	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 2297 2376 +
Chr1	stalkie_big_nohaplotig	exon	133785797	133785895	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 2377 2475 +
Chr1	stalkie_big_nohaplotig	exon	133786060	133786316	99	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 2476 2732 +
Chr1	stalkie_big_nohaplotig	exon	133788525	133788716	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 2733 2924 +
Chr1	stalkie_big_nohaplotig	exon	133788797	133788966	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 2925 3094 +
Chr1	stalkie_big_nohaplotig	exon	133789024	133789200	100	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 3095 3271 +
Chr1	stalkie_big_nohaplotig	exon	133789280	133789584	99	+	.	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 3272 3576 +
Chr1	stalkie_big_nohaplotig	CDS	133777292	133777553	.	+	0	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 1246 1507 +
Chr1	stalkie_big_nohaplotig	CDS	133783089	133783267	.	+	2	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 1508 1686 +
Chr1	stalkie_big_nohaplotig	CDS	133784685	133784893	.	+	0	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 1687 1895 +
Chr1	stalkie_big_nohaplotig	CDS	133784968	133785368	.	+	1	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 1896 2296 +
Chr1	stalkie_big_nohaplotig	CDS	133785498	133785577	.	+	2	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 2297 2376 +
Chr1	stalkie_big_nohaplotig	CDS	133785797	133785895	.	+	0	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 2377 2475 +
Chr1	stalkie_big_nohaplotig	CDS	133786060	133786316	.	+	0	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 2476 2732 +
Chr1	stalkie_big_nohaplotig	CDS	133788525	133788716	.	+	1	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 2733 2924 +
Chr1	stalkie_big_nohaplotig	CDS	133788797	133788966	.	+	1	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 2925 3094 +
Chr1	stalkie_big_nohaplotig	CDS	133789024	133789200	.	+	2	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 3095 3271 +
Chr1	stalkie_big_nohaplotig	CDS	133789280	133789584	.	+	2	Parent=FBgn0025835.1.mrna1;Target=FBgn0025835.1 3272 3576 +
Chr1	stalkie_big_nohaplotig	mRNA	133622533	133623425	.	+	.	ID=ORF2710.mrna1;geneID=ORF2710.path1;Name=ORF2710;Dir=sensecoverage=96.9;identity=98.2;matches=780;mismatches=10;indels=4;unknowns=0;locus=RLOC_00011360
Chr1	stalkie_big_nohaplotig	exon	133622533	133623143	97	+	.	Parent=ORF2710.mrna1;Target=ORF2710 26 639 +
Chr1	stalkie_big_nohaplotig	exon	133623247	133623425	99	+	.	Parent=ORF2710.mrna1;Target=ORF2710 640 819 +
Chr1	stalkie_big_nohaplotig	CDS	133622535	133623143	.	+	0	Parent=ORF2710.mrna1;Target=ORF2710 28 639 +
Chr1	stalkie_big_nohaplotig	CDS	133623247	133623425	.	+	0	Parent=ORF2710.mrna1;Target=ORF2710 640 819 +
Chr1	stalkie_big_nohaplotig	mRNA	133647886	133649581	.	+	.	ID=ORF2638.mrna1;geneID=ORF2638.path1;Name=ORF2638;Dir=sensecoverage=99.4;identity=92.5;matches=803;mismatches=23;indels=42;unknowns=0;locus=RLOC_00011360
Chr1	stalkie_big_nohaplotig	exon	133647886	133647993	99	+	.	Parent=ORF2638.mrna1;Target=ORF2638 6 113 +
Chr1	stalkie_big_nohaplotig	exon	133648083	133648223	66	+	.	Parent=ORF2638.mrna1;Target=ORF2638 114 212 +
Chr1	stalkie_big_nohaplotig	exon	133648301	133648369	92	+	.	Parent=ORF2638.mrna1;Target=ORF2638 213 281 +
Chr1	stalkie_big_nohaplotig	exon	133648431	133648463	100	+	.	Parent=ORF2638.mrna1;Target=ORF2638 282 314 +
Chr1	stalkie_big_nohaplotig	exon	133648582	133648638	96	+	.	Parent=ORF2638.mrna1;Target=ORF2638 315 371 +
Chr1	stalkie_big_nohaplotig	exon	133648703	133648735	93	+	.	Parent=ORF2638.mrna1;Target=ORF2638 372 404 +
Chr1	stalkie_big_nohaplotig	exon	133648841	133648900	100	+	.	Parent=ORF2638.mrna1;Target=ORF2638 405 464 +
Chr1	stalkie_big_nohaplotig	exon	133648961	133648993	90	+	.	Parent=ORF2638.mrna1;Target=ORF2638 465 497 +
Chr1	stalkie_big_nohaplotig	exon	133649051	133649148	96	+	.	Parent=ORF2638.mrna1;Target=ORF2638 498 595 +
Chr1	stalkie_big_nohaplotig	exon	133649346	133649581	99	+	.	Parent=ORF2638.mrna1;Target=ORF2638 596 831 +
Chr1	stalkie_big_nohaplotig	CDS	133648628	133648638	.	+	0	Parent=ORF2638.mrna1;Target=ORF2638 361 371 +
Chr1	stalkie_big_nohaplotig	CDS	133648703	133648735	.	+	1	Parent=ORF2638.mrna1;Target=ORF2638 372 404 +
Chr1	stalkie_big_nohaplotig	CDS	133648841	133648900	.	+	1	Parent=ORF2638.mrna1;Target=ORF2638 405 464 +
Chr1	stalkie_big_nohaplotig	CDS	133648961	133648993	.	+	1	Parent=ORF2638.mrna1;Target=ORF2638 465 497 +
Chr1	stalkie_big_nohaplotig	CDS	133649051	133649148	.	+	1	Parent=ORF2638.mrna1;Target=ORF2638 498 595 +
Chr1	stalkie_big_nohaplotig	CDS	133649346	133649581	.	+	2	Parent=ORF2638.mrna1;Target=ORF2638 596 831 +
Chr1	gffcl	locus	133466645	133466844	.	-	.	ID=RLOC_00011361;geneIDs=comp134732_c0_seq1.path1;transcripts=comp134732_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133466645	133466844	.	-	.	ID=comp134732_c0_seq1.mrna1;geneID=comp134732_c0_seq1.path1;Name=comp134732_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=199;mismatches=1;indels=3;unknowns=0;Target=comp134732_c0_seq1 203 1 .;CDS_Target=comp134732_c0_seq1 160 2 .;locus=RLOC_00011361
Chr1	stalkie_big_nohaplotig	exon	133466645	133466844	98	-	.	Parent=comp134732_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	133466688	133466843	.	-	0	Parent=comp134732_c0_seq1.mrna1
Chr1	gffcl	locus	133467371	133467806	.	+	.	ID=RLOC_00011362;geneIDs=comp114992_c0_seq1.path1;transcripts=comp114992_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133467371	133467806	.	+	.	ID=comp114992_c0_seq1.mrna1;geneID=comp114992_c0_seq1.path1;Name=comp114992_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=432;mismatches=4;indels=1;unknowns=0;Target=comp114992_c0_seq1 437 1 .;CDS_Target=comp114992_c0_seq1 191 3 .;locus=RLOC_00011362
Chr1	stalkie_big_nohaplotig	exon	133467371	133467806	98	+	.	Parent=comp114992_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	133467373	133467561	.	+	0	Parent=comp114992_c0_seq1.mrna1
Chr1	gffcl	locus	133478899	133479565	.	.	.	ID=RLOC_00011363;geneIDs=FBgn0030326.1.path1,comp117038_c0_seq1.path1,comp117038_c0_seq1.path2,comp147368_c1_seq1.path2;transcripts=FBgn0030326.1.mrna1,comp117038_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	133478901	133479565	.	+	.	ID=FBgn0030326.1.mrna1;geneID=FBgn0030326.1.path1;Name=FBgn0030326.1;Dir=sensecoverage=100.0;identity=97.1;matches=332;mismatches=10;indels=0;unknowns=0;locus=RLOC_00011363
Chr1	stalkie_big_nohaplotig	exon	133478901	133479009	98	+	.	Parent=FBgn0030326.1.mrna1;Target=FBgn0030326.1 1 109 +
Chr1	stalkie_big_nohaplotig	exon	133479267	133479390	95	+	.	Parent=FBgn0030326.1.mrna1;Target=FBgn0030326.1 110 233 +
Chr1	stalkie_big_nohaplotig	exon	133479457	133479565	98	+	.	Parent=FBgn0030326.1.mrna1;Target=FBgn0030326.1 234 342 +
Chr1	stalkie_big_nohaplotig	CDS	133478901	133479009	.	+	0	Parent=FBgn0030326.1.mrna1;Target=FBgn0030326.1 1 109 +
Chr1	stalkie_big_nohaplotig	CDS	133479267	133479390	.	+	2	Parent=FBgn0030326.1.mrna1;Target=FBgn0030326.1 110 233 +
Chr1	stalkie_big_nohaplotig	CDS	133479457	133479565	.	+	1	Parent=FBgn0030326.1.mrna1;Target=FBgn0030326.1 234 342 +
Chr1	stalkie_big_nohaplotig	mRNA	133478986	133479169	.	-	.	ID=comp117038_c0_seq1.mrna2;geneID=comp117038_c0_seq1.path2;Name=comp117038_c0_seq1;Dir=indeterminatecoverage=51.1;identity=97.8;matches=180;mismatches=4;indels=0;unknowns=0;Target=comp117038_c0_seq1 360 177 .;CDS_Target=comp117038_c0_seq1 321 292 .;locus=RLOC_00011363
Chr1	stalkie_big_nohaplotig	exon	133478986	133479169	97	-	.	Parent=comp117038_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	133479025	133479054	.	-	0	Parent=comp117038_c0_seq1.mrna2
Chr1	gffcl	locus	133481629	133483849	.	+	.	ID=RLOC_00011364;geneIDs=comp152094_c0_seq1.path1;transcripts=comp152094_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133481629	133483849	.	+	.	ID=comp152094_c0_seq1.mrna1;geneID=comp152094_c0_seq1.path1;Name=comp152094_c0_seq1;Dir=antisensecoverage=100.0;identity=98.4;matches=697;mismatches=9;indels=2;unknowns=0;locus=RLOC_00011364
Chr1	stalkie_big_nohaplotig	exon	133481629	133481717	98	+	.	Parent=comp152094_c0_seq1.mrna1;Target=comp152094_c0_seq1 618 706 -
Chr1	stalkie_big_nohaplotig	exon	133483107	133483251	100	+	.	Parent=comp152094_c0_seq1.mrna1;Target=comp152094_c0_seq1 473 617 -
Chr1	stalkie_big_nohaplotig	exon	133483315	133483438	99	+	.	Parent=comp152094_c0_seq1.mrna1;Target=comp152094_c0_seq1 349 472 -
Chr1	stalkie_big_nohaplotig	exon	133483500	133483849	97	+	.	Parent=comp152094_c0_seq1.mrna1;Target=comp152094_c0_seq1 1 348 -
Chr1	stalkie_big_nohaplotig	CDS	133483131	133483251	.	+	0	Parent=comp152094_c0_seq1.mrna1;Target=comp152094_c0_seq1 473 593 .
Chr1	stalkie_big_nohaplotig	CDS	133483315	133483438	.	+	2	Parent=comp152094_c0_seq1.mrna1;Target=comp152094_c0_seq1 349 472 .
Chr1	stalkie_big_nohaplotig	CDS	133483500	133483674	.	+	1	Parent=comp152094_c0_seq1.mrna1;Target=comp152094_c0_seq1 174 348 .
Chr1	gffcl	locus	133484235	133485724	.	-	.	ID=RLOC_00011365;geneIDs=FBgn0023545.1.path1;transcripts=FBgn0023545.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133484235	133485724	.	-	.	ID=FBgn0023545.1.mrna1;geneID=FBgn0023545.1.path1;Name=FBgn0023545.1;Dir=sensecoverage=100.0;identity=99.7;matches=1071;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011365
Chr1	stalkie_big_nohaplotig	exon	133484235	133484334	100	-	.	Parent=FBgn0023545.1.mrna1;Target=FBgn0023545.1 975 1074 +
Chr1	stalkie_big_nohaplotig	exon	133484390	133484550	99	-	.	Parent=FBgn0023545.1.mrna1;Target=FBgn0023545.1 814 974 +
Chr1	stalkie_big_nohaplotig	exon	133484621	133484731	99	-	.	Parent=FBgn0023545.1.mrna1;Target=FBgn0023545.1 703 813 +
Chr1	stalkie_big_nohaplotig	exon	133484795	133484912	100	-	.	Parent=FBgn0023545.1.mrna1;Target=FBgn0023545.1 585 702 +
Chr1	stalkie_big_nohaplotig	exon	133484975	133485483	99	-	.	Parent=FBgn0023545.1.mrna1;Target=FBgn0023545.1 76 584 +
Chr1	stalkie_big_nohaplotig	exon	133485650	133485724	100	-	.	Parent=FBgn0023545.1.mrna1;Target=FBgn0023545.1 1 75 +
Chr1	stalkie_big_nohaplotig	CDS	133484235	133484334	.	-	1	Parent=FBgn0023545.1.mrna1;Target=FBgn0023545.1 975 1074 +
Chr1	stalkie_big_nohaplotig	CDS	133484390	133484550	.	-	0	Parent=FBgn0023545.1.mrna1;Target=FBgn0023545.1 814 974 +
Chr1	stalkie_big_nohaplotig	CDS	133484621	133484731	.	-	0	Parent=FBgn0023545.1.mrna1;Target=FBgn0023545.1 703 813 +
Chr1	stalkie_big_nohaplotig	CDS	133484795	133484912	.	-	1	Parent=FBgn0023545.1.mrna1;Target=FBgn0023545.1 585 702 +
Chr1	stalkie_big_nohaplotig	CDS	133484975	133485483	.	-	0	Parent=FBgn0023545.1.mrna1;Target=FBgn0023545.1 76 584 +
Chr1	stalkie_big_nohaplotig	CDS	133485650	133485724	.	-	0	Parent=FBgn0023545.1.mrna1;Target=FBgn0023545.1 1 75 +
Chr1	gffcl	locus	133503916	133504628	.	+	.	ID=RLOC_00011366;geneIDs=comp154498_c0_seq1.path1;transcripts=comp154498_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133503916	133504628	.	+	.	ID=comp154498_c0_seq1.mrna1;geneID=comp154498_c0_seq1.path1;Name=comp154498_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=710;mismatches=3;indels=1;unknowns=0;Target=comp154498_c0_seq1 714 1 .;CDS_Target=comp154498_c0_seq1 451 314 .;locus=RLOC_00011366
Chr1	stalkie_big_nohaplotig	exon	133503916	133504628	99	+	.	Parent=comp154498_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	133504229	133504365	.	+	0	Parent=comp154498_c0_seq1.mrna1
Chr1	gffcl	locus	133593579	133593866	.	-	.	ID=RLOC_00011367;geneIDs=comp118495_c0_seq1.path1;transcripts=comp118495_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133593579	133593866	.	-	.	ID=comp118495_c0_seq1.mrna1;geneID=comp118495_c0_seq1.path1;Name=comp118495_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.0;matches=287;mismatches=1;indels=2;unknowns=0;Target=comp118495_c0_seq1 293 4 .;CDS_Target=comp118495_c0_seq1 246 151 .;locus=RLOC_00011367
Chr1	stalkie_big_nohaplotig	exon	133593579	133593866	98	-	.	Parent=comp118495_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	133593626	133593721	.	-	0	Parent=comp118495_c0_seq1.mrna1
Chr1	gffcl	locus	133596831	133597119	.	+	.	ID=RLOC_00011368;geneIDs=comp81313_c0_seq1.path2;transcripts=comp81313_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	133596831	133597119	.	+	.	ID=comp81313_c0_seq1.mrna2;geneID=comp81313_c0_seq1.path2;Name=comp81313_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.7;matches=289;mismatches=0;indels=1;unknowns=0;Target=comp81313_c0_seq1 295 6 .;CDS_Target=comp81313_c0_seq1 57 7 .;locus=RLOC_00011368
Chr1	stalkie_big_nohaplotig	exon	133596831	133597119	99	+	.	Parent=comp81313_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	133596832	133596881	.	+	0	Parent=comp81313_c0_seq1.mrna2
Chr1	gffcl	locus	133599646	134080419	.	+	.	ID=RLOC_00011369;geneIDs=FBgn0027866.1.path1,comp146887_c0_seq1.path1,comp161399_c0_seq1.path1;transcripts=comp146887_c0_seq1.mrna1,comp161399_c0_seq1.mrna1,FBgn0027866.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133599646	134072293	.	+	.	ID=comp146887_c0_seq1.mrna1;geneID=comp146887_c0_seq1.path1;Name=comp146887_c0_seq1;Dir=antisensecoverage=83.4;identity=97.7;matches=216;mismatches=5;indels=0;unknowns=0;Target=comp146887_c0_seq1 196 264 .;locus=RLOC_00011369
Chr1	stalkie_big_nohaplotig	exon	133599646	133599857	97	+	.	Parent=comp146887_c0_seq1.mrna1;Target=comp146887_c0_seq1 54 265 -
Chr1	stalkie_big_nohaplotig	exon	133982846	133982848	100	+	.	Parent=comp146887_c0_seq1.mrna1;Target=comp146887_c0_seq1 51 53 -
Chr1	stalkie_big_nohaplotig	exon	134072288	134072293	100	+	.	Parent=comp146887_c0_seq1.mrna1;Target=comp146887_c0_seq1 45 50 -
Chr1	stalkie_big_nohaplotig	CDS	133599647	133599715	.	+	0	Parent=comp146887_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134070317	134080419	.	+	.	ID=comp161399_c0_seq1.mrna1;geneID=comp161399_c0_seq1.path1;Name=comp161399_c0_seq1;Dir=antisensecoverage=99.6;identity=99.1;matches=5492;mismatches=40;indels=8;unknowns=0;locus=RLOC_00011369
Chr1	stalkie_big_nohaplotig	exon	134070317	134070801	97	+	.	Parent=comp161399_c0_seq1.mrna1;Target=comp161399_c0_seq1 5050 5534 -
Chr1	stalkie_big_nohaplotig	exon	134070886	134071461	99	+	.	Parent=comp161399_c0_seq1.mrna1;Target=comp161399_c0_seq1 4474 5049 -
Chr1	stalkie_big_nohaplotig	exon	134071533	134072097	100	+	.	Parent=comp161399_c0_seq1.mrna1;Target=comp161399_c0_seq1 3909 4473 -
Chr1	stalkie_big_nohaplotig	exon	134072162	134072352	98	+	.	Parent=comp161399_c0_seq1.mrna1;Target=comp161399_c0_seq1 3718 3908 -
Chr1	stalkie_big_nohaplotig	exon	134074828	134075000	100	+	.	Parent=comp161399_c0_seq1.mrna1;Target=comp161399_c0_seq1 3545 3717 -
Chr1	stalkie_big_nohaplotig	exon	134075353	134075708	100	+	.	Parent=comp161399_c0_seq1.mrna1;Target=comp161399_c0_seq1 3189 3544 -
Chr1	stalkie_big_nohaplotig	exon	134075777	134075951	99	+	.	Parent=comp161399_c0_seq1.mrna1;Target=comp161399_c0_seq1 3014 3188 -
Chr1	stalkie_big_nohaplotig	exon	134076021	134076188	98	+	.	Parent=comp161399_c0_seq1.mrna1;Target=comp161399_c0_seq1 2846 3013 -
Chr1	stalkie_big_nohaplotig	exon	134076573	134076733	100	+	.	Parent=comp161399_c0_seq1.mrna1;Target=comp161399_c0_seq1 2685 2845 -
Chr1	stalkie_big_nohaplotig	exon	134077382	134078032	99	+	.	Parent=comp161399_c0_seq1.mrna1;Target=comp161399_c0_seq1 2033 2684 -
Chr1	stalkie_big_nohaplotig	exon	134078151	134078321	97	+	.	Parent=comp161399_c0_seq1.mrna1;Target=comp161399_c0_seq1 1862 2032 -
Chr1	stalkie_big_nohaplotig	exon	134078448	134079193	98	+	.	Parent=comp161399_c0_seq1.mrna1;Target=comp161399_c0_seq1 1122 1861 -
Chr1	stalkie_big_nohaplotig	exon	134079300	134080419	99	+	.	Parent=comp161399_c0_seq1.mrna1;Target=comp161399_c0_seq1 1 1121 -
Chr1	stalkie_big_nohaplotig	CDS	134074971	134075000	.	+	0	Parent=comp161399_c0_seq1.mrna1;Target=comp161399_c0_seq1 3545 3574 .
Chr1	stalkie_big_nohaplotig	CDS	134075353	134075708	.	+	0	Parent=comp161399_c0_seq1.mrna1;Target=comp161399_c0_seq1 3189 3544 .
Chr1	stalkie_big_nohaplotig	CDS	134075777	134075951	.	+	1	Parent=comp161399_c0_seq1.mrna1;Target=comp161399_c0_seq1 3014 3188 .
Chr1	stalkie_big_nohaplotig	CDS	134076021	134076188	.	+	0	Parent=comp161399_c0_seq1.mrna1;Target=comp161399_c0_seq1 2846 3013 .
Chr1	stalkie_big_nohaplotig	CDS	134076573	134076733	.	+	0	Parent=comp161399_c0_seq1.mrna1;Target=comp161399_c0_seq1 2685 2845 .
Chr1	stalkie_big_nohaplotig	CDS	134077382	134077534	.	+	1	Parent=comp161399_c0_seq1.mrna1;Target=comp161399_c0_seq1 2531 2684 .
Chr1	stalkie_big_nohaplotig	mRNA	134070687	134079850	.	+	.	ID=FBgn0027866.1.mrna1;geneID=FBgn0027866.1.path1;Name=FBgn0027866.1;Dir=sensecoverage=100.0;identity=99.1;matches=4024;mismatches=28;indels=8;unknowns=0;locus=RLOC_00011369
Chr1	stalkie_big_nohaplotig	exon	134070687	134070801	97	+	.	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 1 115 +
Chr1	stalkie_big_nohaplotig	exon	134070886	134071461	99	+	.	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 116 691 +
Chr1	stalkie_big_nohaplotig	exon	134071533	134071730	100	+	.	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 692 889 +
Chr1	stalkie_big_nohaplotig	exon	134072162	134072352	98	+	.	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 890 1080 +
Chr1	stalkie_big_nohaplotig	exon	134075353	134075708	100	+	.	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 1081 1436 +
Chr1	stalkie_big_nohaplotig	exon	134075777	134075951	99	+	.	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 1437 1611 +
Chr1	stalkie_big_nohaplotig	exon	134076021	134076188	98	+	.	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 1612 1779 +
Chr1	stalkie_big_nohaplotig	exon	134076573	134076733	99	+	.	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 1780 1939 +
Chr1	stalkie_big_nohaplotig	exon	134077382	134078032	99	+	.	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 1940 2591 +
Chr1	stalkie_big_nohaplotig	exon	134078151	134078321	97	+	.	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 2592 2762 +
Chr1	stalkie_big_nohaplotig	exon	134078448	134079193	98	+	.	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 2763 3502 +
Chr1	stalkie_big_nohaplotig	exon	134079300	134079850	100	+	.	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 3503 4053 +
Chr1	stalkie_big_nohaplotig	CDS	134070687	134070801	.	+	0	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 1 115 +
Chr1	stalkie_big_nohaplotig	CDS	134070886	134071461	.	+	2	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 116 691 +
Chr1	stalkie_big_nohaplotig	CDS	134071533	134071730	.	+	2	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 692 889 +
Chr1	stalkie_big_nohaplotig	CDS	134072162	134072352	.	+	2	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 890 1080 +
Chr1	stalkie_big_nohaplotig	CDS	134075353	134075708	.	+	0	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 1081 1436 +
Chr1	stalkie_big_nohaplotig	CDS	134075777	134075951	.	+	1	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 1437 1611 +
Chr1	stalkie_big_nohaplotig	CDS	134076021	134076188	.	+	0	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 1612 1779 +
Chr1	stalkie_big_nohaplotig	CDS	134076573	134076733	.	+	0	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 1780 1939 +
Chr1	stalkie_big_nohaplotig	CDS	134077382	134078032	.	+	1	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 1940 2591 +
Chr1	stalkie_big_nohaplotig	CDS	134078151	134078321	.	+	1	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 2592 2762 +
Chr1	stalkie_big_nohaplotig	CDS	134078448	134079193	.	+	1	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 2763 3502 +
Chr1	stalkie_big_nohaplotig	CDS	134079300	134079850	.	+	2	Parent=FBgn0027866.1.mrna1;Target=FBgn0027866.1 3503 4053 +
Chr1	gffcl	locus	133603876	133604634	.	-	.	ID=RLOC_00011370;geneIDs=comp157214_c0_seq1.path1;transcripts=comp157214_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133603876	133604634	.	-	.	ID=comp157214_c0_seq1.mrna1;geneID=comp157214_c0_seq1.path1;Name=comp157214_c0_seq1;Dir=indeterminatecoverage=99.7;identity=94.1;matches=719;mismatches=40;indels=5;unknowns=0;Target=comp157214_c0_seq1 766 3 .;CDS_Target=comp157214_c0_seq1 333 322 .;locus=RLOC_00011370
Chr1	stalkie_big_nohaplotig	exon	133603876	133604634	94	-	.	Parent=comp157214_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	133604305	133604316	.	-	0	Parent=comp157214_c0_seq1.mrna1
Chr1	gffcl	locus	133605246	133605537	.	-	.	ID=RLOC_00011371;geneIDs=comp152771_c0_seq1.path1;transcripts=comp152771_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133605246	133605537	.	-	.	ID=comp152771_c0_seq1.mrna1;geneID=comp152771_c0_seq1.path1;Name=comp152771_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.9;matches=280;mismatches=12;indels=16;unknowns=0;Target=comp152771_c0_seq1 308 1 .;CDS_Target=comp152771_c0_seq1 47 3 .;locus=RLOC_00011371
Chr1	stalkie_big_nohaplotig	exon	133605246	133605537	90	-	.	Parent=comp152771_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	133605491	133605535	.	-	0	Parent=comp152771_c0_seq1.mrna1
Chr1	gffcl	locus	133621980	133622336	.	+	.	ID=RLOC_00011372;geneIDs=comp159580_c0_seq1.path2;transcripts=comp159580_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	133621980	133622336	.	+	.	ID=comp159580_c0_seq1.mrna2;geneID=comp159580_c0_seq1.path2;Name=comp159580_c0_seq1;Dir=indeterminatecoverage=40.2;identity=98.0;matches=350;mismatches=7;indels=0;unknowns=0;Target=comp159580_c0_seq1 887 531 .;locus=RLOC_00011372
Chr1	stalkie_big_nohaplotig	exon	133621980	133622336	98	+	.	Parent=comp159580_c0_seq1.mrna2
Chr1	gffcl	locus	133718033	133719336	.	-	.	ID=RLOC_00011373;geneIDs=ORF1981.path1;transcripts=ORF1981.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133718033	133719336	.	-	.	ID=ORF1981.mrna1;geneID=ORF1981.path1;Name=ORF1981;Dir=sensecoverage=100.0;identity=99.3;matches=938;mismatches=7;indels=0;unknowns=0;locus=RLOC_00011373
Chr1	stalkie_big_nohaplotig	exon	133718033	133718425	99	-	.	Parent=ORF1981.mrna1;Target=ORF1981 553 945 +
Chr1	stalkie_big_nohaplotig	exon	133718507	133718673	100	-	.	Parent=ORF1981.mrna1;Target=ORF1981 386 552 +
Chr1	stalkie_big_nohaplotig	exon	133718743	133718876	97	-	.	Parent=ORF1981.mrna1;Target=ORF1981 252 385 +
Chr1	stalkie_big_nohaplotig	exon	133718948	133719046	100	-	.	Parent=ORF1981.mrna1;Target=ORF1981 153 251 +
Chr1	stalkie_big_nohaplotig	exon	133719112	133719189	100	-	.	Parent=ORF1981.mrna1;Target=ORF1981 75 152 +
Chr1	stalkie_big_nohaplotig	exon	133719263	133719336	100	-	.	Parent=ORF1981.mrna1;Target=ORF1981 1 74 +
Chr1	stalkie_big_nohaplotig	CDS	133718033	133718425	.	-	0	Parent=ORF1981.mrna1;Target=ORF1981 553 945 +
Chr1	stalkie_big_nohaplotig	CDS	133718507	133718673	.	-	2	Parent=ORF1981.mrna1;Target=ORF1981 386 552 +
Chr1	stalkie_big_nohaplotig	CDS	133718743	133718876	.	-	1	Parent=ORF1981.mrna1;Target=ORF1981 252 385 +
Chr1	stalkie_big_nohaplotig	CDS	133718948	133719046	.	-	1	Parent=ORF1981.mrna1;Target=ORF1981 153 251 +
Chr1	stalkie_big_nohaplotig	CDS	133719112	133719189	.	-	1	Parent=ORF1981.mrna1;Target=ORF1981 75 152 +
Chr1	stalkie_big_nohaplotig	CDS	133719263	133719336	.	-	0	Parent=ORF1981.mrna1;Target=ORF1981 1 74 +
Chr1	gffcl	locus	133722763	133723902	.	-	.	ID=RLOC_00011374;geneIDs=ORF1325.path1;transcripts=ORF1325.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133722763	133723902	.	-	.	ID=ORF1325.mrna1;geneID=ORF1325.path1;Name=ORF1325;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1133;mismatches=7;indels=0;unknowns=0;Target=ORF1325 1140 1 .;locus=RLOC_00011374
Chr1	stalkie_big_nohaplotig	exon	133722763	133723902	99	-	.	Parent=ORF1325.mrna1
Chr1	stalkie_big_nohaplotig	CDS	133722763	133723902	.	-	0	Parent=ORF1325.mrna1
Chr1	gffcl	locus	133798761	133799189	.	-	.	ID=RLOC_00011375;geneIDs=comp135856_c0_seq1.path1;transcripts=comp135856_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133798761	133799189	.	-	.	ID=comp135856_c0_seq1.mrna1;geneID=comp135856_c0_seq1.path1;Name=comp135856_c0_seq1;Dir=indeterminatecoverage=94.3;identity=99.3;matches=427;mismatches=2;indels=1;unknowns=0;Target=comp135856_c0_seq1 451 22 .;CDS_Target=comp135856_c0_seq1 127 23 .;locus=RLOC_00011375
Chr1	stalkie_big_nohaplotig	exon	133798761	133799189	99	-	.	Parent=comp135856_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	133799084	133799188	.	-	0	Parent=comp135856_c0_seq1.mrna1
Chr1	gffcl	locus	133824032	133824264	.	+	.	ID=RLOC_00011376;geneIDs=comp135543_c0_seq1.path1;transcripts=comp135543_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133824032	133824264	.	+	.	ID=comp135543_c0_seq1.mrna1;geneID=comp135543_c0_seq1.path1;Name=comp135543_c0_seq1;Dir=indeterminatecoverage=93.9;identity=88.2;matches=217;mismatches=16;indels=13;unknowns=0;Target=comp135543_c0_seq1 246 1 .;CDS_Target=comp135543_c0_seq1 92 3 .;locus=RLOC_00011376
Chr1	stalkie_big_nohaplotig	exon	133824032	133824264	88	+	.	Parent=comp135543_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	133824034	133824123	.	+	0	Parent=comp135543_c0_seq1.mrna1
Chr1	gffcl	locus	133828823	133829149	.	-	.	ID=RLOC_00011377;geneIDs=comp83675_c0_seq1.path1;transcripts=comp83675_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133828823	133829149	.	-	.	ID=comp83675_c0_seq1.mrna1;geneID=comp83675_c0_seq1.path1;Name=comp83675_c0_seq1;Dir=indeterminatecoverage=90.6;identity=98.8;matches=323;mismatches=3;indels=1;unknowns=0;Target=comp83675_c0_seq1 326 1 .;CDS_Target=comp83675_c0_seq1 243 61 .;locus=RLOC_00011377
Chr1	stalkie_big_nohaplotig	exon	133828823	133829149	98	-	.	Parent=comp83675_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	133828907	133829089	.	-	0	Parent=comp83675_c0_seq1.mrna1
Chr1	gffcl	locus	133879749	133880156	.	+	.	ID=RLOC_00011378;geneIDs=comp118849_c0_seq1.path1;transcripts=comp118849_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133879749	133880156	.	+	.	ID=comp118849_c0_seq1.mrna1;geneID=comp118849_c0_seq1.path1;Name=comp118849_c0_seq1;Dir=indeterminatecoverage=94.4;identity=96.3;matches=393;mismatches=15;indels=0;unknowns=0;Target=comp118849_c0_seq1 432 25 .;CDS_Target=comp118849_c0_seq1 214 152 .;locus=RLOC_00011378
Chr1	stalkie_big_nohaplotig	exon	133879749	133880156	96	+	.	Parent=comp118849_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	133879876	133879938	.	+	0	Parent=comp118849_c0_seq1.mrna1
Chr1	gffcl	locus	133880318	133881119	.	+	.	ID=RLOC_00011379;geneIDs=comp150136_c0_seq1.path1;transcripts=comp150136_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133880318	133881119	.	+	.	ID=comp150136_c0_seq1.mrna1;geneID=comp150136_c0_seq1.path1;Name=comp150136_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.4;matches=776;mismatches=25;indels=4;unknowns=0;Target=comp150136_c0_seq1 804 1 .;CDS_Target=comp150136_c0_seq1 115 62 .;locus=RLOC_00011379
Chr1	stalkie_big_nohaplotig	exon	133880318	133881119	96	+	.	Parent=comp150136_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	133880379	133880430	.	+	0	Parent=comp150136_c0_seq1.mrna1
Chr1	gffcl	locus	133898355	133901156	.	+	.	ID=RLOC_00011380;geneIDs=ORF408.path1;transcripts=ORF408.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133898355	133901156	.	+	.	ID=ORF408.mrna1;geneID=ORF408.path1;Name=ORF408;Dir=sensecoverage=100.0;identity=98.8;matches=1858;mismatches=23;indels=0;unknowns=0;locus=RLOC_00011380
Chr1	stalkie_big_nohaplotig	exon	133898355	133899414	98	+	.	Parent=ORF408.mrna1;Target=ORF408 1 1060 +
Chr1	stalkie_big_nohaplotig	exon	133899483	133899648	98	+	.	Parent=ORF408.mrna1;Target=ORF408 1061 1226 +
Chr1	stalkie_big_nohaplotig	exon	133899705	133900005	99	+	.	Parent=ORF408.mrna1;Target=ORF408 1227 1527 +
Chr1	stalkie_big_nohaplotig	exon	133900353	133900524	100	+	.	Parent=ORF408.mrna1;Target=ORF408 1528 1699 +
Chr1	stalkie_big_nohaplotig	exon	133900905	133901025	100	+	.	Parent=ORF408.mrna1;Target=ORF408 1700 1820 +
Chr1	stalkie_big_nohaplotig	exon	133901096	133901156	98	+	.	Parent=ORF408.mrna1;Target=ORF408 1821 1881 +
Chr1	stalkie_big_nohaplotig	CDS	133898355	133899414	.	+	0	Parent=ORF408.mrna1;Target=ORF408 1 1060 +
Chr1	stalkie_big_nohaplotig	CDS	133899483	133899648	.	+	2	Parent=ORF408.mrna1;Target=ORF408 1061 1226 +
Chr1	stalkie_big_nohaplotig	CDS	133899705	133900005	.	+	1	Parent=ORF408.mrna1;Target=ORF408 1227 1527 +
Chr1	stalkie_big_nohaplotig	CDS	133900353	133900524	.	+	0	Parent=ORF408.mrna1;Target=ORF408 1528 1699 +
Chr1	stalkie_big_nohaplotig	CDS	133900905	133901025	.	+	2	Parent=ORF408.mrna1;Target=ORF408 1700 1820 +
Chr1	stalkie_big_nohaplotig	CDS	133901096	133901156	.	+	1	Parent=ORF408.mrna1;Target=ORF408 1821 1881 +
Chr1	gffcl	locus	133904020	133904955	.	-	.	ID=RLOC_00011381;geneIDs=FBgn0039946.1.path1;transcripts=FBgn0039946.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133904020	133904955	.	-	.	ID=FBgn0039946.1.mrna1;geneID=FBgn0039946.1.path1;Name=FBgn0039946.1;Dir=sensecoverage=100.0;identity=99.9;matches=863;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011381
Chr1	stalkie_big_nohaplotig	exon	133904020	133904679	99	-	.	Parent=FBgn0039946.1.mrna1;Target=FBgn0039946.1 205 864 +
Chr1	stalkie_big_nohaplotig	exon	133904752	133904955	100	-	.	Parent=FBgn0039946.1.mrna1;Target=FBgn0039946.1 1 204 +
Chr1	stalkie_big_nohaplotig	CDS	133904020	133904679	.	-	0	Parent=FBgn0039946.1.mrna1;Target=FBgn0039946.1 205 864 +
Chr1	stalkie_big_nohaplotig	CDS	133904752	133904955	.	-	0	Parent=FBgn0039946.1.mrna1;Target=FBgn0039946.1 1 204 +
Chr1	gffcl	locus	133907965	133908229	.	-	.	ID=RLOC_00011382;geneIDs=comp153449_c0_seq1.path1;transcripts=comp153449_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133907965	133908229	.	-	.	ID=comp153449_c0_seq1.mrna1;geneID=comp153449_c0_seq1.path1;Name=comp153449_c0_seq1;Dir=indeterminatecoverage=97.8;identity=96.2;matches=256;mismatches=8;indels=2;unknowns=0;Target=comp153449_c0_seq1 271 7 .;CDS_Target=comp153449_c0_seq1 21 7 .;locus=RLOC_00011382
Chr1	stalkie_big_nohaplotig	exon	133907965	133908229	96	-	.	Parent=comp153449_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	133908214	133908229	.	-	0	Parent=comp153449_c0_seq1.mrna1
Chr1	gffcl	locus	133910098	133922843	.	-	.	ID=RLOC_00011383;geneIDs=FBgn0011760.2.path1;transcripts=FBgn0011760.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133910098	133922843	.	-	.	ID=FBgn0011760.2.mrna1;geneID=FBgn0011760.2.path1;Name=FBgn0011760.2;Dir=sensecoverage=100.0;identity=100.0;matches=282;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011383
Chr1	stalkie_big_nohaplotig	exon	133910098	133910256	100	-	.	Parent=FBgn0011760.2.mrna1;Target=FBgn0011760.2 124 282 +
Chr1	stalkie_big_nohaplotig	exon	133922721	133922843	100	-	.	Parent=FBgn0011760.2.mrna1;Target=FBgn0011760.2 1 123 +
Chr1	stalkie_big_nohaplotig	CDS	133910098	133910256	.	-	0	Parent=FBgn0011760.2.mrna1;Target=FBgn0011760.2 124 282 +
Chr1	stalkie_big_nohaplotig	CDS	133922721	133922843	.	-	0	Parent=FBgn0011760.2.mrna1;Target=FBgn0011760.2 1 123 +
Chr1	gffcl	locus	133943220	133943868	.	+	.	ID=RLOC_00011384;geneIDs=comp135815_c0_seq1.path1;transcripts=comp135815_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133943220	133943868	.	+	.	ID=comp135815_c0_seq1.mrna1;geneID=comp135815_c0_seq1.path1;Name=comp135815_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=647;mismatches=0;indels=3;unknowns=0;Target=comp135815_c0_seq1 648 1 .;CDS_Target=comp135815_c0_seq1 113 3 .;locus=RLOC_00011384
Chr1	stalkie_big_nohaplotig	exon	133943220	133943868	99	+	.	Parent=comp135815_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	133943222	133943334	.	+	0	Parent=comp135815_c0_seq1.mrna1
Chr1	gffcl	locus	133944322	133951253	.	+	.	ID=RLOC_00011385;geneIDs=FBgn0022768.1.path1;transcripts=FBgn0022768.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133944322	133951253	.	+	.	ID=FBgn0022768.1.mrna1;geneID=FBgn0022768.1.path1;Name=FBgn0022768.1;Dir=sensecoverage=100.0;identity=99.8;matches=3532;mismatches=8;indels=0;unknowns=0;locus=RLOC_00011385
Chr1	stalkie_big_nohaplotig	exon	133944322	133944856	100	+	.	Parent=FBgn0022768.1.mrna1;Target=FBgn0022768.1 1 535 +
Chr1	stalkie_big_nohaplotig	exon	133947191	133947469	100	+	.	Parent=FBgn0022768.1.mrna1;Target=FBgn0022768.1 536 814 +
Chr1	stalkie_big_nohaplotig	exon	133947546	133947714	99	+	.	Parent=FBgn0022768.1.mrna1;Target=FBgn0022768.1 815 983 +
Chr1	stalkie_big_nohaplotig	exon	133948697	133951253	99	+	.	Parent=FBgn0022768.1.mrna1;Target=FBgn0022768.1 984 3540 +
Chr1	stalkie_big_nohaplotig	CDS	133944322	133944856	.	+	0	Parent=FBgn0022768.1.mrna1;Target=FBgn0022768.1 1 535 +
Chr1	stalkie_big_nohaplotig	CDS	133947191	133947469	.	+	2	Parent=FBgn0022768.1.mrna1;Target=FBgn0022768.1 536 814 +
Chr1	stalkie_big_nohaplotig	CDS	133947546	133947714	.	+	2	Parent=FBgn0022768.1.mrna1;Target=FBgn0022768.1 815 983 +
Chr1	stalkie_big_nohaplotig	CDS	133948697	133951253	.	+	1	Parent=FBgn0022768.1.mrna1;Target=FBgn0022768.1 984 3540 +
Chr1	gffcl	locus	133951740	133952277	.	.	.	ID=RLOC_00011386;geneIDs=comp137569_c0_seq1.path1,comp657972_c0_seq1.path1;transcripts=comp137569_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133951982	133952277	.	+	.	ID=comp137569_c0_seq1.mrna1;geneID=comp137569_c0_seq1.path1;Name=comp137569_c0_seq1;Dir=indeterminatecoverage=92.5;identity=99.0;matches=293;mismatches=3;indels=0;unknowns=0;Target=comp137569_c0_seq1 316 21 .;CDS_Target=comp137569_c0_seq1 164 87 .;locus=RLOC_00011386
Chr1	stalkie_big_nohaplotig	exon	133951982	133952277	98	+	.	Parent=comp137569_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	133952048	133952125	.	+	0	Parent=comp137569_c0_seq1.mrna1
Chr1	gffcl	locus	133964374	133964745	.	-	.	ID=RLOC_00011387;geneIDs=comp103757_c0_seq1.path1;transcripts=comp103757_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133964374	133964745	.	-	.	ID=comp103757_c0_seq1.mrna1;geneID=comp103757_c0_seq1.path1;Name=comp103757_c0_seq1;Dir=indeterminatecoverage=99.7;identity=97.6;matches=363;mismatches=7;indels=2;unknowns=0;Target=comp103757_c0_seq1 370 1 .;CDS_Target=comp103757_c0_seq1 144 1 .;locus=RLOC_00011387
Chr1	stalkie_big_nohaplotig	exon	133964374	133964745	97	-	.	Parent=comp103757_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	133964602	133964745	.	-	0	Parent=comp103757_c0_seq1.mrna1
Chr1	gffcl	locus	133987717	133989514	.	+	.	ID=RLOC_00011388;geneIDs=FBgn0029898.1.path1;transcripts=FBgn0029898.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133987717	133989514	.	+	.	ID=FBgn0029898.1.mrna1;geneID=FBgn0029898.1.path1;Name=FBgn0029898.1;Dir=sensecoverage=100.0;identity=99.3;matches=1585;mismatches=11;indels=0;unknowns=0;locus=RLOC_00011388
Chr1	stalkie_big_nohaplotig	exon	133987717	133987958	99	+	.	Parent=FBgn0029898.1.mrna1;Target=FBgn0029898.1 1 242 +
Chr1	stalkie_big_nohaplotig	exon	133988032	133988295	98	+	.	Parent=FBgn0029898.1.mrna1;Target=FBgn0029898.1 243 506 +
Chr1	stalkie_big_nohaplotig	exon	133988365	133989209	99	+	.	Parent=FBgn0029898.1.mrna1;Target=FBgn0029898.1 507 1351 +
Chr1	stalkie_big_nohaplotig	exon	133989270	133989514	100	+	.	Parent=FBgn0029898.1.mrna1;Target=FBgn0029898.1 1352 1596 +
Chr1	stalkie_big_nohaplotig	CDS	133987717	133987958	.	+	0	Parent=FBgn0029898.1.mrna1;Target=FBgn0029898.1 1 242 +
Chr1	stalkie_big_nohaplotig	CDS	133988032	133988295	.	+	1	Parent=FBgn0029898.1.mrna1;Target=FBgn0029898.1 243 506 +
Chr1	stalkie_big_nohaplotig	CDS	133988365	133989209	.	+	1	Parent=FBgn0029898.1.mrna1;Target=FBgn0029898.1 507 1351 +
Chr1	stalkie_big_nohaplotig	CDS	133989270	133989514	.	+	2	Parent=FBgn0029898.1.mrna1;Target=FBgn0029898.1 1352 1596 +
Chr1	gffcl	locus	133995935	134004121	.	-	.	ID=RLOC_00011389;geneIDs=comp163527_c0_seq1.path1;transcripts=comp163527_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	133995935	134004121	.	-	.	ID=comp163527_c0_seq1.mrna1;geneID=comp163527_c0_seq1.path1;Name=comp163527_c0_seq1;Dir=sensecoverage=100.0;identity=91.5;matches=2053;mismatches=71;indels=119;unknowns=0;Target=comp163527_c0_seq1 1830 2027 +;locus=RLOC_00011389
Chr1	stalkie_big_nohaplotig	exon	133995935	133997931	90	-	.	Parent=comp163527_c0_seq1.mrna1;Target=comp163527_c0_seq1 232 2139 +
Chr1	stalkie_big_nohaplotig	exon	134003891	134004121	100	-	.	Parent=comp163527_c0_seq1.mrna1;Target=comp163527_c0_seq1 1 231 +
Chr1	stalkie_big_nohaplotig	CDS	133996047	133996244	.	-	0	Parent=comp163527_c0_seq1.mrna1
Chr1	gffcl	locus	134001414	134001710	.	-	.	ID=RLOC_00011390;geneIDs=comp149790_c0_seq1.path1;transcripts=comp149790_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134001414	134001710	.	-	.	ID=comp149790_c0_seq1.mrna1;geneID=comp149790_c0_seq1.path1;Name=comp149790_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.0;matches=291;mismatches=4;indels=2;unknowns=0;Target=comp149790_c0_seq1 295 1 .;CDS_Target=comp149790_c0_seq1 140 3 .;locus=RLOC_00011390
Chr1	stalkie_big_nohaplotig	exon	134001414	134001710	97	-	.	Parent=comp149790_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134001569	134001708	.	-	0	Parent=comp149790_c0_seq1.mrna1
Chr1	gffcl	locus	134014988	134030286	.	+	.	ID=RLOC_00011391;geneIDs=FBgn0029899.1.path1;transcripts=FBgn0029899.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134014988	134030286	.	+	.	ID=FBgn0029899.1.mrna1;geneID=FBgn0029899.1.path1;Name=FBgn0029899.1;Dir=sensecoverage=100.0;identity=99.6;matches=9817;mismatches=43;indels=0;unknowns=0;locus=RLOC_00011391
Chr1	stalkie_big_nohaplotig	exon	134014988	134015202	100	+	.	Parent=FBgn0029899.1.mrna1;Target=FBgn0029899.1 1 215 +
Chr1	stalkie_big_nohaplotig	exon	134015268	134015334	100	+	.	Parent=FBgn0029899.1.mrna1;Target=FBgn0029899.1 216 282 +
Chr1	stalkie_big_nohaplotig	exon	134017780	134024641	99	+	.	Parent=FBgn0029899.1.mrna1;Target=FBgn0029899.1 283 7144 +
Chr1	stalkie_big_nohaplotig	exon	134026054	134027130	99	+	.	Parent=FBgn0029899.1.mrna1;Target=FBgn0029899.1 7145 8221 +
Chr1	stalkie_big_nohaplotig	exon	134027200	134027699	99	+	.	Parent=FBgn0029899.1.mrna1;Target=FBgn0029899.1 8222 8721 +
Chr1	stalkie_big_nohaplotig	exon	134029148	134030286	99	+	.	Parent=FBgn0029899.1.mrna1;Target=FBgn0029899.1 8722 9860 +
Chr1	stalkie_big_nohaplotig	CDS	134014988	134015202	.	+	0	Parent=FBgn0029899.1.mrna1;Target=FBgn0029899.1 1 215 +
Chr1	stalkie_big_nohaplotig	CDS	134015268	134015334	.	+	1	Parent=FBgn0029899.1.mrna1;Target=FBgn0029899.1 216 282 +
Chr1	stalkie_big_nohaplotig	CDS	134017780	134024641	.	+	0	Parent=FBgn0029899.1.mrna1;Target=FBgn0029899.1 283 7144 +
Chr1	stalkie_big_nohaplotig	CDS	134026054	134027130	.	+	2	Parent=FBgn0029899.1.mrna1;Target=FBgn0029899.1 7145 8221 +
Chr1	stalkie_big_nohaplotig	CDS	134027200	134027699	.	+	2	Parent=FBgn0029899.1.mrna1;Target=FBgn0029899.1 8222 8721 +
Chr1	stalkie_big_nohaplotig	CDS	134029148	134030284	.	+	0	Parent=FBgn0029899.1.mrna1;Target=FBgn0029899.1 8722 9858 +
Chr1	gffcl	locus	134028455	134028913	.	+	.	ID=RLOC_00011392;geneIDs=comp155385_c1_seq1.path1;transcripts=comp155385_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134028455	134028913	.	+	.	ID=comp155385_c1_seq1.mrna1;geneID=comp155385_c1_seq1.path1;Name=comp155385_c1_seq1;Dir=indeterminatecoverage=99.6;identity=92.1;matches=452;mismatches=7;indels=32;unknowns=0;Target=comp155385_c1_seq1 491 1 .;CDS_Target=comp155385_c1_seq1 133 2 .;locus=RLOC_00011392
Chr1	stalkie_big_nohaplotig	exon	134028455	134028913	92	+	.	Parent=comp155385_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134028456	134028587	.	+	0	Parent=comp155385_c1_seq1.mrna1
Chr1	gffcl	locus	134034549	134034875	.	-	.	ID=RLOC_00011393;geneIDs=comp142727_c0_seq1.path1;transcripts=comp142727_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134034549	134034875	.	-	.	ID=comp142727_c0_seq1.mrna1;geneID=comp142727_c0_seq1.path1;Name=comp142727_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=326;mismatches=1;indels=0;unknowns=0;Target=comp142727_c0_seq1 327 1 .;CDS_Target=comp142727_c0_seq1 325 179 .;locus=RLOC_00011393
Chr1	stalkie_big_nohaplotig	exon	134034549	134034875	99	-	.	Parent=comp142727_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134034551	134034697	.	-	0	Parent=comp142727_c0_seq1.mrna1
Chr1	gffcl	locus	134034879	134039046	.	+	.	ID=RLOC_00011394;geneIDs=FBgn0030724.1.path1;transcripts=FBgn0030724.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134034879	134039046	.	+	.	ID=FBgn0030724.1.mrna1;geneID=FBgn0030724.1.path1;Name=FBgn0030724.1;Dir=sensecoverage=100.0;identity=99.9;matches=824;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011394
Chr1	stalkie_big_nohaplotig	exon	134034879	134034940	100	+	.	Parent=FBgn0030724.1.mrna1;Target=FBgn0030724.1 1 62 +
Chr1	stalkie_big_nohaplotig	exon	134035077	134035256	99	+	.	Parent=FBgn0030724.1.mrna1;Target=FBgn0030724.1 63 242 +
Chr1	stalkie_big_nohaplotig	exon	134035329	134035497	100	+	.	Parent=FBgn0030724.1.mrna1;Target=FBgn0030724.1 243 411 +
Chr1	stalkie_big_nohaplotig	exon	134038495	134038619	100	+	.	Parent=FBgn0030724.1.mrna1;Target=FBgn0030724.1 412 536 +
Chr1	stalkie_big_nohaplotig	exon	134038681	134038823	100	+	.	Parent=FBgn0030724.1.mrna1;Target=FBgn0030724.1 537 679 +
Chr1	stalkie_big_nohaplotig	exon	134038901	134039046	100	+	.	Parent=FBgn0030724.1.mrna1;Target=FBgn0030724.1 680 825 +
Chr1	stalkie_big_nohaplotig	CDS	134034879	134034940	.	+	0	Parent=FBgn0030724.1.mrna1;Target=FBgn0030724.1 1 62 +
Chr1	stalkie_big_nohaplotig	CDS	134035077	134035256	.	+	1	Parent=FBgn0030724.1.mrna1;Target=FBgn0030724.1 63 242 +
Chr1	stalkie_big_nohaplotig	CDS	134035329	134035497	.	+	1	Parent=FBgn0030724.1.mrna1;Target=FBgn0030724.1 243 411 +
Chr1	stalkie_big_nohaplotig	CDS	134038495	134038619	.	+	0	Parent=FBgn0030724.1.mrna1;Target=FBgn0030724.1 412 536 +
Chr1	stalkie_big_nohaplotig	CDS	134038681	134038823	.	+	1	Parent=FBgn0030724.1.mrna1;Target=FBgn0030724.1 537 679 +
Chr1	stalkie_big_nohaplotig	CDS	134038901	134039046	.	+	2	Parent=FBgn0030724.1.mrna1;Target=FBgn0030724.1 680 825 +
Chr1	gffcl	locus	134041085	134042665	.	+	.	ID=RLOC_00011395;geneIDs=FBgn0023542.1.path1;transcripts=FBgn0023542.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134041085	134042665	.	+	.	ID=FBgn0023542.1.mrna1;geneID=FBgn0023542.1.path1;Name=FBgn0023542.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1574;mismatches=7;indels=0;unknowns=0;Target=FBgn0023542.1 1581 1 .;locus=RLOC_00011395
Chr1	stalkie_big_nohaplotig	exon	134041085	134042665	99	+	.	Parent=FBgn0023542.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134041085	134042665	.	+	0	Parent=FBgn0023542.1.mrna1
Chr1	gffcl	locus	134042768	134043968	.	-	.	ID=RLOC_00011396;geneIDs=FBgn0003116.1.path1;transcripts=FBgn0003116.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134042768	134043968	.	-	.	ID=FBgn0003116.1.mrna1;geneID=FBgn0003116.1.path1;Name=FBgn0003116.1;Dir=sensecoverage=100.0;identity=99.8;matches=1147;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011396
Chr1	stalkie_big_nohaplotig	exon	134042768	134043865	99	-	.	Parent=FBgn0003116.1.mrna1;Target=FBgn0003116.1 52 1149 +
Chr1	stalkie_big_nohaplotig	exon	134043918	134043968	100	-	.	Parent=FBgn0003116.1.mrna1;Target=FBgn0003116.1 1 51 +
Chr1	stalkie_big_nohaplotig	CDS	134042768	134043865	.	-	0	Parent=FBgn0003116.1.mrna1;Target=FBgn0003116.1 52 1149 +
Chr1	stalkie_big_nohaplotig	CDS	134043918	134043968	.	-	0	Parent=FBgn0003116.1.mrna1;Target=FBgn0003116.1 1 51 +
Chr1	gffcl	locus	134054114	134055099	.	+	.	ID=RLOC_00011399;geneIDs=ORF2086.path1;transcripts=ORF2086.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134054114	134055099	.	+	.	ID=ORF2086.mrna1;geneID=ORF2086.path1;Name=ORF2086;Dir=sensecoverage=100.0;identity=99.3;matches=915;mismatches=5;indels=1;unknowns=0;locus=RLOC_00011399
Chr1	stalkie_big_nohaplotig	exon	134054114	134054703	99	+	.	Parent=ORF2086.mrna1;Target=ORF2086 1 590 +
Chr1	stalkie_big_nohaplotig	exon	134054770	134055099	99	+	.	Parent=ORF2086.mrna1;Target=ORF2086 591 921 +
Chr1	stalkie_big_nohaplotig	CDS	134054114	134054703	.	+	0	Parent=ORF2086.mrna1;Target=ORF2086 1 590 +
Chr1	stalkie_big_nohaplotig	CDS	134054770	134055099	.	+	1	Parent=ORF2086.mrna1;Target=ORF2086 591 921 +
Chr1	gffcl	locus	134056747	134057382	.	-	.	ID=RLOC_00011400;geneIDs=comp161085_c2_seq1.path1;transcripts=comp161085_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134056747	134057382	.	-	.	ID=comp161085_c2_seq1.mrna1;geneID=comp161085_c2_seq1.path1;Name=comp161085_c2_seq1;Dir=indeterminatecoverage=85.7;identity=93.2;matches=593;mismatches=6;indels=37;unknowns=0;Target=comp161085_c2_seq1 615 17 .;CDS_Target=comp161085_c2_seq1 129 19 .;locus=RLOC_00011400
Chr1	stalkie_big_nohaplotig	exon	134056747	134057382	93	-	.	Parent=comp161085_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134057270	134057380	.	-	0	Parent=comp161085_c2_seq1.mrna1
Chr1	gffcl	locus	134059797	134064023	.	-	.	ID=RLOC_00011401;geneIDs=FBgn0031381.1.path1;transcripts=FBgn0031381.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134059797	134064023	.	-	.	ID=FBgn0031381.1.mrna1;geneID=FBgn0031381.1.path1;Name=FBgn0031381.1;Dir=sensecoverage=100.0;identity=100.0;matches=546;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011401
Chr1	stalkie_big_nohaplotig	exon	134059797	134059877	100	-	.	Parent=FBgn0031381.1.mrna1;Target=FBgn0031381.1 466 546 +
Chr1	stalkie_big_nohaplotig	exon	134059938	134060113	100	-	.	Parent=FBgn0031381.1.mrna1;Target=FBgn0031381.1 290 465 +
Chr1	stalkie_big_nohaplotig	exon	134060196	134060309	100	-	.	Parent=FBgn0031381.1.mrna1;Target=FBgn0031381.1 176 289 +
Chr1	stalkie_big_nohaplotig	exon	134063849	134064023	100	-	.	Parent=FBgn0031381.1.mrna1;Target=FBgn0031381.1 1 175 +
Chr1	stalkie_big_nohaplotig	CDS	134059797	134059877	.	-	0	Parent=FBgn0031381.1.mrna1;Target=FBgn0031381.1 466 546 +
Chr1	stalkie_big_nohaplotig	CDS	134059938	134060113	.	-	2	Parent=FBgn0031381.1.mrna1;Target=FBgn0031381.1 290 465 +
Chr1	stalkie_big_nohaplotig	CDS	134060196	134060309	.	-	2	Parent=FBgn0031381.1.mrna1;Target=FBgn0031381.1 176 289 +
Chr1	stalkie_big_nohaplotig	CDS	134063849	134064023	.	-	0	Parent=FBgn0031381.1.mrna1;Target=FBgn0031381.1 1 175 +
Chr1	gffcl	locus	134072468	134074216	.	-	.	ID=RLOC_00011403;geneIDs=comp152665_c0_seq1.path1;transcripts=comp152665_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134072468	134074216	.	-	.	ID=comp152665_c0_seq1.mrna1;geneID=comp152665_c0_seq1.path1;Name=comp152665_c0_seq1;Dir=indeterminatecoverage=98.4;identity=94.6;matches=1126;mismatches=49;indels=15;unknowns=0;Target=comp152665_c0_seq1 1070 927 .;locus=RLOC_00011403
Chr1	stalkie_big_nohaplotig	exon	134072468	134073004	97	-	.	Parent=comp152665_c0_seq1.mrna1;Target=comp152665_c0_seq1 1190 653 .
Chr1	stalkie_big_nohaplotig	exon	134073568	134074216	92	-	.	Parent=comp152665_c0_seq1.mrna1;Target=comp152665_c0_seq1 652 12 .
Chr1	stalkie_big_nohaplotig	CDS	134072588	134072731	.	-	0	Parent=comp152665_c0_seq1.mrna1
Chr1	gffcl	locus	134084215	134089961	.	-	.	ID=RLOC_00011404;geneIDs=FBgn0003575.1.path1;transcripts=FBgn0003575.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134084215	134089961	.	-	.	ID=FBgn0003575.1.mrna1;geneID=FBgn0003575.1.path1;Name=FBgn0003575.1;Dir=sensecoverage=100.0;identity=99.6;matches=3615;mismatches=12;indels=3;unknowns=0;locus=RLOC_00011404
Chr1	stalkie_big_nohaplotig	exon	134084215	134085870	99	-	.	Parent=FBgn0003575.1.mrna1;Target=FBgn0003575.1 1975 3630 +
Chr1	stalkie_big_nohaplotig	exon	134085940	134086010	100	-	.	Parent=FBgn0003575.1.mrna1;Target=FBgn0003575.1 1904 1974 +
Chr1	stalkie_big_nohaplotig	exon	134086079	134086227	99	-	.	Parent=FBgn0003575.1.mrna1;Target=FBgn0003575.1 1755 1903 +
Chr1	stalkie_big_nohaplotig	exon	134086489	134087342	99	-	.	Parent=FBgn0003575.1.mrna1;Target=FBgn0003575.1 898 1754 +
Chr1	stalkie_big_nohaplotig	exon	134087411	134087725	99	-	.	Parent=FBgn0003575.1.mrna1;Target=FBgn0003575.1 583 897 +
Chr1	stalkie_big_nohaplotig	exon	134089305	134089522	100	-	.	Parent=FBgn0003575.1.mrna1;Target=FBgn0003575.1 365 582 +
Chr1	stalkie_big_nohaplotig	exon	134089598	134089961	99	-	.	Parent=FBgn0003575.1.mrna1;Target=FBgn0003575.1 1 364 +
Chr1	stalkie_big_nohaplotig	CDS	134084215	134085870	.	-	0	Parent=FBgn0003575.1.mrna1;Target=FBgn0003575.1 1975 3630 +
Chr1	stalkie_big_nohaplotig	CDS	134085940	134086010	.	-	2	Parent=FBgn0003575.1.mrna1;Target=FBgn0003575.1 1904 1974 +
Chr1	stalkie_big_nohaplotig	CDS	134086079	134086227	.	-	1	Parent=FBgn0003575.1.mrna1;Target=FBgn0003575.1 1755 1903 +
Chr1	stalkie_big_nohaplotig	CDS	134086489	134087342	.	-	0	Parent=FBgn0003575.1.mrna1;Target=FBgn0003575.1 898 1754 +
Chr1	stalkie_big_nohaplotig	CDS	134087411	134087725	.	-	0	Parent=FBgn0003575.1.mrna1;Target=FBgn0003575.1 583 897 +
Chr1	stalkie_big_nohaplotig	CDS	134089305	134089522	.	-	2	Parent=FBgn0003575.1.mrna1;Target=FBgn0003575.1 365 582 +
Chr1	stalkie_big_nohaplotig	CDS	134089598	134089961	.	-	0	Parent=FBgn0003575.1.mrna1;Target=FBgn0003575.1 1 364 +
Chr1	gffcl	locus	134094744	134152408	.	+	.	ID=RLOC_00011405;geneIDs=FBgn0000711.1.path1;transcripts=FBgn0000711.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134094744	134152408	.	+	.	ID=FBgn0000711.1.mrna1;geneID=FBgn0000711.1.path1;Name=FBgn0000711.1;Dir=sensecoverage=100.0;identity=99.6;matches=998;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011405
Chr1	stalkie_big_nohaplotig	exon	134094744	134094807	100	+	.	Parent=FBgn0000711.1.mrna1;Target=FBgn0000711.1 1 64 +
Chr1	stalkie_big_nohaplotig	exon	134150374	134150721	99	+	.	Parent=FBgn0000711.1.mrna1;Target=FBgn0000711.1 65 412 +
Chr1	stalkie_big_nohaplotig	exon	134150787	134151130	99	+	.	Parent=FBgn0000711.1.mrna1;Target=FBgn0000711.1 413 756 +
Chr1	stalkie_big_nohaplotig	exon	134152103	134152237	99	+	.	Parent=FBgn0000711.1.mrna1;Target=FBgn0000711.1 757 891 +
Chr1	stalkie_big_nohaplotig	exon	134152298	134152408	99	+	.	Parent=FBgn0000711.1.mrna1;Target=FBgn0000711.1 892 1002 +
Chr1	stalkie_big_nohaplotig	CDS	134094744	134094807	.	+	0	Parent=FBgn0000711.1.mrna1;Target=FBgn0000711.1 1 64 +
Chr1	stalkie_big_nohaplotig	CDS	134150374	134150721	.	+	2	Parent=FBgn0000711.1.mrna1;Target=FBgn0000711.1 65 412 +
Chr1	stalkie_big_nohaplotig	CDS	134150787	134151130	.	+	2	Parent=FBgn0000711.1.mrna1;Target=FBgn0000711.1 413 756 +
Chr1	stalkie_big_nohaplotig	CDS	134152103	134152237	.	+	0	Parent=FBgn0000711.1.mrna1;Target=FBgn0000711.1 757 891 +
Chr1	stalkie_big_nohaplotig	CDS	134152298	134152408	.	+	0	Parent=FBgn0000711.1.mrna1;Target=FBgn0000711.1 892 1002 +
Chr1	gffcl	locus	134108258	134108634	.	+	.	ID=RLOC_00011406;geneIDs=comp128950_c0_seq1.path1;transcripts=comp128950_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134108258	134108634	.	+	.	ID=comp128950_c0_seq1.mrna1;geneID=comp128950_c0_seq1.path1;Name=comp128950_c0_seq1;Dir=indeterminatecoverage=93.5;identity=100.0;matches=377;mismatches=0;indels=0;unknowns=0;Target=comp128950_c0_seq1 401 25 .;CDS_Target=comp128950_c0_seq1 335 27 .;locus=RLOC_00011406
Chr1	stalkie_big_nohaplotig	exon	134108258	134108634	100	+	.	Parent=comp128950_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134108260	134108568	.	+	0	Parent=comp128950_c0_seq1.mrna1
Chr1	gffcl	locus	134155069	134155678	.	+	.	ID=RLOC_00011407;geneIDs=comp146231_c0_seq1.path1;transcripts=comp146231_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134155069	134155678	.	+	.	ID=comp146231_c0_seq1.mrna1;geneID=comp146231_c0_seq1.path1;Name=comp146231_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.5;matches=607;mismatches=3;indels=0;unknowns=0;Target=comp146231_c0_seq1 610 1 .;CDS_Target=comp146231_c0_seq1 260 150 .;locus=RLOC_00011407
Chr1	stalkie_big_nohaplotig	exon	134155069	134155678	99	+	.	Parent=comp146231_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134155218	134155328	.	+	0	Parent=comp146231_c0_seq1.mrna1
Chr1	gffcl	locus	134157610	134160961	.	-	.	ID=RLOC_00011408;geneIDs=CPIJ020094.1.path1;transcripts=CPIJ020094.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134157610	134160961	.	-	.	ID=CPIJ020094.1.mrna1;geneID=CPIJ020094.1.path1;Name=CPIJ020094.1;Dir=sensecoverage=100.0;identity=98.4;matches=1677;mismatches=26;indels=1;unknowns=0;locus=RLOC_00011408
Chr1	stalkie_big_nohaplotig	exon	134157610	134158073	99	-	.	Parent=CPIJ020094.1.mrna1;Target=CPIJ020094.1 1241 1704 +
Chr1	stalkie_big_nohaplotig	exon	134158134	134158308	100	-	.	Parent=CPIJ020094.1.mrna1;Target=CPIJ020094.1 1066 1240 +
Chr1	stalkie_big_nohaplotig	exon	134158424	134158756	97	-	.	Parent=CPIJ020094.1.mrna1;Target=CPIJ020094.1 733 1065 +
Chr1	stalkie_big_nohaplotig	exon	134160032	134160244	99	-	.	Parent=CPIJ020094.1.mrna1;Target=CPIJ020094.1 520 732 +
Chr1	stalkie_big_nohaplotig	exon	134160332	134160442	95	-	.	Parent=CPIJ020094.1.mrna1;Target=CPIJ020094.1 409 519 +
Chr1	stalkie_big_nohaplotig	exon	134160501	134160622	100	-	.	Parent=CPIJ020094.1.mrna1;Target=CPIJ020094.1 287 408 +
Chr1	stalkie_big_nohaplotig	exon	134160677	134160961	97	-	.	Parent=CPIJ020094.1.mrna1;Target=CPIJ020094.1 1 286 +
Chr1	stalkie_big_nohaplotig	CDS	134157610	134158073	.	-	2	Parent=CPIJ020094.1.mrna1;Target=CPIJ020094.1 1241 1704 +
Chr1	stalkie_big_nohaplotig	CDS	134158134	134158308	.	-	0	Parent=CPIJ020094.1.mrna1;Target=CPIJ020094.1 1066 1240 +
Chr1	stalkie_big_nohaplotig	CDS	134158424	134158756	.	-	0	Parent=CPIJ020094.1.mrna1;Target=CPIJ020094.1 733 1065 +
Chr1	stalkie_big_nohaplotig	CDS	134160032	134160244	.	-	0	Parent=CPIJ020094.1.mrna1;Target=CPIJ020094.1 520 732 +
Chr1	stalkie_big_nohaplotig	CDS	134160332	134160442	.	-	0	Parent=CPIJ020094.1.mrna1;Target=CPIJ020094.1 409 519 +
Chr1	stalkie_big_nohaplotig	CDS	134160501	134160622	.	-	2	Parent=CPIJ020094.1.mrna1;Target=CPIJ020094.1 287 408 +
Chr1	stalkie_big_nohaplotig	CDS	134160677	134160842	.	-	0	Parent=CPIJ020094.1.mrna1;Target=CPIJ020094.1 121 286 +
Chr1	gffcl	locus	134164839	134165116	.	-	.	ID=RLOC_00011409;geneIDs=comp137646_c0_seq1.path1;transcripts=comp137646_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134164839	134165116	.	-	.	ID=comp137646_c0_seq1.mrna1;geneID=comp137646_c0_seq1.path1;Name=comp137646_c0_seq1;Dir=indeterminatecoverage=80.3;identity=97.8;matches=272;mismatches=6;indels=0;unknowns=0;Target=comp137646_c0_seq1 298 21 .;CDS_Target=comp137646_c0_seq1 217 149 .;locus=RLOC_00011409
Chr1	stalkie_big_nohaplotig	exon	134164839	134165116	97	-	.	Parent=comp137646_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134164920	134164988	.	-	0	Parent=comp137646_c0_seq1.mrna1
Chr1	gffcl	locus	134166895	134201563	.	-	.	ID=RLOC_00011410;geneIDs=FBgn0052683.1.path1;transcripts=FBgn0052683.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134166895	134201563	.	-	.	ID=FBgn0052683.1.mrna1;geneID=FBgn0052683.1.path1;Name=FBgn0052683.1;Dir=sensecoverage=100.0;identity=99.4;matches=2098;mismatches=13;indels=0;unknowns=0;locus=RLOC_00011410
Chr1	stalkie_big_nohaplotig	exon	134166895	134167953	99	-	.	Parent=FBgn0052683.1.mrna1;Target=FBgn0052683.1 1054 2112 +
Chr1	stalkie_big_nohaplotig	exon	134192926	134193102	100	-	.	Parent=FBgn0052683.1.mrna1;Target=FBgn0052683.1 877 1053 +
Chr1	stalkie_big_nohaplotig	exon	134193410	134193939	99	-	.	Parent=FBgn0052683.1.mrna1;Target=FBgn0052683.1 347 876 +
Chr1	stalkie_big_nohaplotig	exon	134198328	134198475	100	-	.	Parent=FBgn0052683.1.mrna1;Target=FBgn0052683.1 199 346 +
Chr1	stalkie_big_nohaplotig	exon	134201367	134201563	100	-	.	Parent=FBgn0052683.1.mrna1;Target=FBgn0052683.1 2 198 +
Chr1	stalkie_big_nohaplotig	CDS	134166895	134167953	.	-	0	Parent=FBgn0052683.1.mrna1;Target=FBgn0052683.1 1054 2112 +
Chr1	stalkie_big_nohaplotig	CDS	134192926	134193102	.	-	0	Parent=FBgn0052683.1.mrna1;Target=FBgn0052683.1 877 1053 +
Chr1	stalkie_big_nohaplotig	CDS	134193410	134193939	.	-	2	Parent=FBgn0052683.1.mrna1;Target=FBgn0052683.1 347 876 +
Chr1	stalkie_big_nohaplotig	CDS	134198328	134198475	.	-	0	Parent=FBgn0052683.1.mrna1;Target=FBgn0052683.1 199 346 +
Chr1	stalkie_big_nohaplotig	CDS	134201367	134201561	.	-	0	Parent=FBgn0052683.1.mrna1;Target=FBgn0052683.1 4 198 +
Chr1	gffcl	locus	134173963	134174362	.	-	.	ID=RLOC_00011411;geneIDs=comp135957_c0_seq1.path1;transcripts=comp135957_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134173963	134174362	.	-	.	ID=comp135957_c0_seq1.mrna1;geneID=comp135957_c0_seq1.path1;Name=comp135957_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.1;matches=389;mismatches=11;indels=9;unknowns=0;Target=comp135957_c0_seq1 409 1 .;CDS_Target=comp135957_c0_seq1 279 1 .;locus=RLOC_00011411
Chr1	stalkie_big_nohaplotig	exon	134173963	134174362	95	-	.	Parent=comp135957_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134174093	134174362	.	-	0	Parent=comp135957_c0_seq1.mrna1
Chr1	gffcl	locus	134240419	134240874	.	+	.	ID=RLOC_00011413;geneIDs=comp134690_c0_seq1.path1;transcripts=comp134690_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134240419	134240874	.	+	.	ID=comp134690_c0_seq1.mrna1;geneID=comp134690_c0_seq1.path1;Name=comp134690_c0_seq1;Dir=indeterminatecoverage=83.5;identity=99.3;matches=453;mismatches=2;indels=1;unknowns=0;Target=comp134690_c0_seq1 483 29 .;CDS_Target=comp134690_c0_seq1 111 31 .;locus=RLOC_00011413
Chr1	stalkie_big_nohaplotig	exon	134240419	134240874	99	+	.	Parent=comp134690_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134240421	134240501	.	+	0	Parent=comp134690_c0_seq1.mrna1
Chr1	gffcl	locus	134241640	134243177	.	+	.	ID=RLOC_00011414;geneIDs=comp161865_c2_seq1.path1;transcripts=comp161865_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134241640	134243177	.	+	.	ID=comp161865_c2_seq1.mrna1;geneID=comp161865_c2_seq1.path1;Name=comp161865_c2_seq1;Dir=indeterminatecoverage=100.0;identity=90.6;matches=1463;mismatches=41;indels=110;unknowns=0;Target=comp161865_c2_seq1 1580 1 .;CDS_Target=comp161865_c2_seq1 129 1 .;locus=RLOC_00011414
Chr1	stalkie_big_nohaplotig	exon	134241640	134243177	90	+	.	Parent=comp161865_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134241640	134241768	.	+	0	Parent=comp161865_c2_seq1.mrna1
Chr1	gffcl	locus	134249159	134251625	.	-	.	ID=RLOC_00011415;geneIDs=FBgn0040372.path1;transcripts=FBgn0040372.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134249159	134251625	.	-	.	ID=FBgn0040372.mrna1;geneID=FBgn0040372.path1;Name=FBgn0040372;Dir=sensecoverage=100.0;identity=99.9;matches=716;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011415
Chr1	stalkie_big_nohaplotig	exon	134249159	134249371	100	-	.	Parent=FBgn0040372.mrna1;Target=FBgn0040372 505 717 +
Chr1	stalkie_big_nohaplotig	exon	134251055	134251193	99	-	.	Parent=FBgn0040372.mrna1;Target=FBgn0040372 366 504 +
Chr1	stalkie_big_nohaplotig	exon	134251261	134251625	100	-	.	Parent=FBgn0040372.mrna1;Target=FBgn0040372 1 365 +
Chr1	stalkie_big_nohaplotig	CDS	134249159	134249371	.	-	0	Parent=FBgn0040372.mrna1;Target=FBgn0040372 505 717 +
Chr1	stalkie_big_nohaplotig	CDS	134251055	134251193	.	-	1	Parent=FBgn0040372.mrna1;Target=FBgn0040372 366 504 +
Chr1	stalkie_big_nohaplotig	CDS	134251261	134251625	.	-	0	Parent=FBgn0040372.mrna1;Target=FBgn0040372 1 365 +
Chr1	gffcl	locus	134256613	134256911	.	-	.	ID=RLOC_00011416;geneIDs=Dv_FBgn0203627.path1;transcripts=Dv_FBgn0203627.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134256613	134256911	.	-	.	ID=Dv_FBgn0203627.mrna1;geneID=Dv_FBgn0203627.path1;Name=Dv_FBgn0203627;Dir=indeterminatecoverage=99.7;identity=100.0;matches=299;mismatches=0;indels=0;unknowns=0;Target=Dv_FBgn0203627 299 1 .;CDS_Target=Dv_FBgn0203627 297 1 .;locus=RLOC_00011416
Chr1	stalkie_big_nohaplotig	exon	134256613	134256911	100	-	.	Parent=Dv_FBgn0203627.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134256615	134256911	.	-	0	Parent=Dv_FBgn0203627.mrna1
Chr1	gffcl	locus	134297542	134297804	.	-	.	ID=RLOC_00011417;geneIDs=comp369711_c0_seq1.path1;transcripts=comp369711_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134297542	134297804	.	-	.	ID=comp369711_c0_seq1.mrna1;geneID=comp369711_c0_seq1.path1;Name=comp369711_c0_seq1;Dir=indeterminatecoverage=96.3;identity=98.5;matches=259;mismatches=4;indels=0;unknowns=0;Target=comp369711_c0_seq1 273 11 .;CDS_Target=comp369711_c0_seq1 129 13 .;locus=RLOC_00011417
Chr1	stalkie_big_nohaplotig	exon	134297542	134297804	98	-	.	Parent=comp369711_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134297686	134297802	.	-	0	Parent=comp369711_c0_seq1.mrna1
Chr1	gffcl	locus	134322323	134323703	.	+	.	ID=RLOC_00011418;geneIDs=FBgn0029720.1.path1;transcripts=FBgn0029720.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134322323	134323703	.	+	.	ID=FBgn0029720.1.mrna1;geneID=FBgn0029720.1.path1;Name=FBgn0029720.1;Dir=sensecoverage=99.8;identity=98.5;matches=1082;mismatches=11;indels=6;unknowns=0;locus=RLOC_00011418
Chr1	stalkie_big_nohaplotig	exon	134322323	134322490	98	+	.	Parent=FBgn0029720.1.mrna1;Target=FBgn0029720.1 3 170 +
Chr1	stalkie_big_nohaplotig	exon	134322641	134322810	98	+	.	Parent=FBgn0029720.1.mrna1;Target=FBgn0029720.1 171 340 +
Chr1	stalkie_big_nohaplotig	exon	134322877	134323071	100	+	.	Parent=FBgn0029720.1.mrna1;Target=FBgn0029720.1 341 535 +
Chr1	stalkie_big_nohaplotig	exon	134323141	134323703	97	+	.	Parent=FBgn0029720.1.mrna1;Target=FBgn0029720.1 536 1098 +
Chr1	stalkie_big_nohaplotig	CDS	134322324	134322490	.	+	0	Parent=FBgn0029720.1.mrna1;Target=FBgn0029720.1 4 170 +
Chr1	stalkie_big_nohaplotig	CDS	134322641	134322810	.	+	1	Parent=FBgn0029720.1.mrna1;Target=FBgn0029720.1 171 340 +
Chr1	stalkie_big_nohaplotig	CDS	134322877	134323071	.	+	2	Parent=FBgn0029720.1.mrna1;Target=FBgn0029720.1 341 535 +
Chr1	stalkie_big_nohaplotig	CDS	134323141	134323703	.	+	2	Parent=FBgn0029720.1.mrna1;Target=FBgn0029720.1 536 1098 +
Chr1	gffcl	locus	134324075	134324651	.	+	.	ID=RLOC_00011419;geneIDs=comp129985_c0_seq1.path1;transcripts=comp129985_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134324075	134324651	.	+	.	ID=comp129985_c0_seq1.mrna1;geneID=comp129985_c0_seq1.path1;Name=comp129985_c0_seq1;Dir=indeterminatecoverage=96.8;identity=92.7;matches=557;mismatches=20;indels=24;unknowns=0;Target=comp129985_c0_seq1 621 21 .;CDS_Target=comp129985_c0_seq1 133 23 .;locus=RLOC_00011419
Chr1	stalkie_big_nohaplotig	exon	134324075	134324651	92	+	.	Parent=comp129985_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134324077	134324176	.	+	0	Parent=comp129985_c0_seq1.mrna1
Chr1	gffcl	locus	134330791	134331167	.	+	.	ID=RLOC_00011420;geneIDs=comp139455_c0_seq1.path1;transcripts=comp139455_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134330791	134331167	.	+	.	ID=comp139455_c0_seq1.mrna1;geneID=comp139455_c0_seq1.path1;Name=comp139455_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=377;mismatches=0;indels=0;unknowns=0;Target=comp139455_c0_seq1 377 1 .;CDS_Target=comp139455_c0_seq1 377 201 .;locus=RLOC_00011420
Chr1	stalkie_big_nohaplotig	exon	134330791	134331167	100	+	.	Parent=comp139455_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134330991	134331167	.	+	0	Parent=comp139455_c0_seq1.mrna1
Chr1	gffcl	locus	134332659	134333330	.	+	.	ID=RLOC_00011421;geneIDs=comp157994_c1_seq1.path1;transcripts=comp157994_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134332659	134333330	.	+	.	ID=comp157994_c1_seq1.mrna1;geneID=comp157994_c1_seq1.path1;Name=comp157994_c1_seq1;Dir=sensecoverage=97.9;identity=97.0;matches=552;mismatches=17;indels=0;unknowns=0;Target=comp157994_c1_seq1 60 221 +;locus=RLOC_00011421
Chr1	stalkie_big_nohaplotig	exon	134332659	134332682	100	+	.	Parent=comp157994_c1_seq1.mrna1;Target=comp157994_c1_seq1 1 24 +
Chr1	stalkie_big_nohaplotig	exon	134332786	134333330	96	+	.	Parent=comp157994_c1_seq1.mrna1;Target=comp157994_c1_seq1 25 569 +
Chr1	stalkie_big_nohaplotig	CDS	134332821	134332982	.	+	0	Parent=comp157994_c1_seq1.mrna1
Chr1	gffcl	locus	134336110	134337727	.	+	.	ID=RLOC_00011422;geneIDs=comp150079_c0_seq1.path1;transcripts=comp150079_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134336110	134337727	.	+	.	ID=comp150079_c0_seq1.mrna1;geneID=comp150079_c0_seq1.path1;Name=comp150079_c0_seq1;Dir=sensecoverage=95.3;identity=98.6;matches=817;mismatches=3;indels=9;unknowns=0;Target=comp150079_c0_seq1 6 98 +;locus=RLOC_00011422
Chr1	stalkie_big_nohaplotig	exon	134336110	134336386	99	+	.	Parent=comp150079_c0_seq1.mrna1;Target=comp150079_c0_seq1 6 282 +
Chr1	stalkie_big_nohaplotig	exon	134337176	134337727	98	+	.	Parent=comp150079_c0_seq1.mrna1;Target=comp150079_c0_seq1 283 825 +
Chr1	stalkie_big_nohaplotig	CDS	134336110	134336202	.	+	0	Parent=comp150079_c0_seq1.mrna1
Chr1	gffcl	locus	134336482	134336858	.	+	.	ID=RLOC_00011423;geneIDs=comp139455_c0_seq1.path2;transcripts=comp139455_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	134336482	134336858	.	+	.	ID=comp139455_c0_seq1.mrna2;geneID=comp139455_c0_seq1.path2;Name=comp139455_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=377;mismatches=0;indels=0;unknowns=0;Target=comp139455_c0_seq1 377 1 .;CDS_Target=comp139455_c0_seq1 377 201 .;locus=RLOC_00011423
Chr1	stalkie_big_nohaplotig	exon	134336482	134336858	100	+	.	Parent=comp139455_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	134336682	134336858	.	+	0	Parent=comp139455_c0_seq1.mrna2
Chr1	gffcl	locus	134437825	134438105	.	+	.	ID=RLOC_00011424;geneIDs=comp89994_c0_seq1.path1;transcripts=comp89994_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134437825	134438105	.	+	.	ID=comp89994_c0_seq1.mrna1;geneID=comp89994_c0_seq1.path1;Name=comp89994_c0_seq1;Dir=indeterminatecoverage=95.9;identity=100.0;matches=281;mismatches=0;indels=0;unknowns=0;Target=comp89994_c0_seq1 293 13 .;CDS_Target=comp89994_c0_seq1 63 13 .;locus=RLOC_00011424
Chr1	stalkie_big_nohaplotig	exon	134437825	134438105	100	+	.	Parent=comp89994_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134437825	134437875	.	+	0	Parent=comp89994_c0_seq1.mrna1
Chr1	gffcl	locus	134439434	134440663	.	+	.	ID=RLOC_00011425;geneIDs=FBgn0001142.2.path1;transcripts=FBgn0001142.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134439434	134440663	.	+	.	ID=FBgn0001142.2.mrna1;geneID=FBgn0001142.2.path1;Name=FBgn0001142.2;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1223;mismatches=7;indels=0;unknowns=0;Target=FBgn0001142.2 1230 1 .;locus=RLOC_00011425
Chr1	stalkie_big_nohaplotig	exon	134439434	134440663	99	+	.	Parent=FBgn0001142.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134439434	134440663	.	+	0	Parent=FBgn0001142.2.mrna1
Chr1	gffcl	locus	134543951	134544357	.	-	.	ID=RLOC_00011426;geneIDs=comp147232_c0_seq1.path3;transcripts=comp147232_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	134543951	134544357	.	-	.	ID=comp147232_c0_seq1.mrna3;geneID=comp147232_c0_seq1.path3;Name=comp147232_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.5;matches=406;mismatches=1;indels=1;unknowns=0;Target=comp147232_c0_seq1 413 6 .;CDS_Target=comp147232_c0_seq1 279 136 .;locus=RLOC_00011426
Chr1	stalkie_big_nohaplotig	exon	134543951	134544357	99	-	.	Parent=comp147232_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	134544085	134544227	.	-	0	Parent=comp147232_c0_seq1.mrna3
Chr1	gffcl	locus	134551782	134556628	.	-	.	ID=RLOC_00011427;geneIDs=FBgn0051956.1.path1;transcripts=FBgn0051956.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134551782	134556628	.	-	.	ID=FBgn0051956.1.mrna1;geneID=FBgn0051956.1.path1;Name=FBgn0051956.1;Dir=sensecoverage=99.8;identity=99.0;matches=2084;mismatches=21;indels=0;unknowns=0;locus=RLOC_00011427
Chr1	stalkie_big_nohaplotig	exon	134551782	134552440	99	-	.	Parent=FBgn0051956.1.mrna1;Target=FBgn0051956.1 1447 2105 +
Chr1	stalkie_big_nohaplotig	exon	134552532	134553303	99	-	.	Parent=FBgn0051956.1.mrna1;Target=FBgn0051956.1 675 1446 +
Chr1	stalkie_big_nohaplotig	exon	134553531	134554168	97	-	.	Parent=FBgn0051956.1.mrna1;Target=FBgn0051956.1 37 674 +
Chr1	stalkie_big_nohaplotig	exon	134556593	134556628	100	-	.	Parent=FBgn0051956.1.mrna1;Target=FBgn0051956.1 1 36 +
Chr1	stalkie_big_nohaplotig	CDS	134551784	134552440	.	-	0	Parent=FBgn0051956.1.mrna1;Target=FBgn0051956.1 1447 2103 +
Chr1	stalkie_big_nohaplotig	CDS	134552532	134553303	.	-	1	Parent=FBgn0051956.1.mrna1;Target=FBgn0051956.1 675 1446 +
Chr1	stalkie_big_nohaplotig	CDS	134553531	134554168	.	-	0	Parent=FBgn0051956.1.mrna1;Target=FBgn0051956.1 37 674 +
Chr1	stalkie_big_nohaplotig	CDS	134556593	134556628	.	-	0	Parent=FBgn0051956.1.mrna1;Target=FBgn0051956.1 1 36 +
Chr1	gffcl	locus	134656212	134710993	.	+	.	ID=RLOC_00011428;geneIDs=comp148097_c0_seq1.path1;transcripts=comp148097_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134656212	134710993	.	+	.	ID=comp148097_c0_seq1.mrna1;geneID=comp148097_c0_seq1.path1;Name=comp148097_c0_seq1;Dir=sensecoverage=99.7;identity=97.9;matches=368;mismatches=2;indels=6;unknowns=0;Target=comp148097_c0_seq1 4 69 +;locus=RLOC_00011428
Chr1	stalkie_big_nohaplotig	exon	134656212	134656543	97	+	.	Parent=comp148097_c0_seq1.mrna1;Target=comp148097_c0_seq1 2 337 +
Chr1	stalkie_big_nohaplotig	exon	134710955	134710993	100	+	.	Parent=comp148097_c0_seq1.mrna1;Target=comp148097_c0_seq1 338 376 +
Chr1	stalkie_big_nohaplotig	CDS	134656214	134656279	.	+	0	Parent=comp148097_c0_seq1.mrna1
Chr1	gffcl	locus	134711080	134821344	.	+	.	ID=RLOC_00011429;geneIDs=ORF1728.path1,FBgn0085443.1.path1,comp163512_c3_seq1.path1;transcripts=ORF1728.mrna1,FBgn0085443.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134711080	134726806	.	+	.	ID=ORF1728.mrna1;geneID=ORF1728.path1;Name=ORF1728;Dir=sensecoverage=100.0;identity=99.5;matches=1006;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011429
Chr1	stalkie_big_nohaplotig	exon	134711080	134711945	99	+	.	Parent=ORF1728.mrna1;Target=ORF1728 1 866 +
Chr1	stalkie_big_nohaplotig	exon	134726662	134726806	99	+	.	Parent=ORF1728.mrna1;Target=ORF1728 867 1011 +
Chr1	stalkie_big_nohaplotig	CDS	134711080	134711945	.	+	0	Parent=ORF1728.mrna1;Target=ORF1728 1 866 +
Chr1	stalkie_big_nohaplotig	CDS	134726662	134726806	.	+	1	Parent=ORF1728.mrna1;Target=ORF1728 867 1011 +
Chr1	stalkie_big_nohaplotig	mRNA	134726801	134821344	.	+	.	ID=FBgn0085443.1.mrna1;geneID=FBgn0085443.1.path1;Name=FBgn0085443.1;Dir=sensecoverage=100.0;identity=99.5;matches=4330;mismatches=23;indels=0;unknowns=0;locus=RLOC_00011429
Chr1	stalkie_big_nohaplotig	exon	134726801	134727130	99	+	.	Parent=FBgn0085443.1.mrna1;Target=FBgn0085443.1 1 330 +
Chr1	stalkie_big_nohaplotig	exon	134760767	134760970	100	+	.	Parent=FBgn0085443.1.mrna1;Target=FBgn0085443.1 331 534 +
Chr1	stalkie_big_nohaplotig	exon	134799416	134800820	99	+	.	Parent=FBgn0085443.1.mrna1;Target=FBgn0085443.1 535 1939 +
Chr1	stalkie_big_nohaplotig	exon	134800883	134801962	99	+	.	Parent=FBgn0085443.1.mrna1;Target=FBgn0085443.1 1940 3019 +
Chr1	stalkie_big_nohaplotig	exon	134802024	134802212	100	+	.	Parent=FBgn0085443.1.mrna1;Target=FBgn0085443.1 3020 3208 +
Chr1	stalkie_big_nohaplotig	exon	134818544	134819370	99	+	.	Parent=FBgn0085443.1.mrna1;Target=FBgn0085443.1 3209 4035 +
Chr1	stalkie_big_nohaplotig	exon	134821027	134821344	99	+	.	Parent=FBgn0085443.1.mrna1;Target=FBgn0085443.1 4036 4353 +
Chr1	stalkie_big_nohaplotig	CDS	134726801	134727130	.	+	0	Parent=FBgn0085443.1.mrna1;Target=FBgn0085443.1 1 330 +
Chr1	stalkie_big_nohaplotig	CDS	134760767	134760970	.	+	0	Parent=FBgn0085443.1.mrna1;Target=FBgn0085443.1 331 534 +
Chr1	stalkie_big_nohaplotig	CDS	134799416	134800820	.	+	0	Parent=FBgn0085443.1.mrna1;Target=FBgn0085443.1 535 1939 +
Chr1	stalkie_big_nohaplotig	CDS	134800883	134801962	.	+	2	Parent=FBgn0085443.1.mrna1;Target=FBgn0085443.1 1940 3019 +
Chr1	stalkie_big_nohaplotig	CDS	134802024	134802212	.	+	2	Parent=FBgn0085443.1.mrna1;Target=FBgn0085443.1 3020 3208 +
Chr1	stalkie_big_nohaplotig	CDS	134818544	134819370	.	+	2	Parent=FBgn0085443.1.mrna1;Target=FBgn0085443.1 3209 4035 +
Chr1	stalkie_big_nohaplotig	CDS	134821027	134821344	.	+	0	Parent=FBgn0085443.1.mrna1;Target=FBgn0085443.1 4036 4353 +
Chr1	gffcl	locus	134822221	134822673	.	+	.	ID=RLOC_00011430;geneIDs=comp149850_c0_seq1.path1;transcripts=comp149850_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134822221	134822673	.	+	.	ID=comp149850_c0_seq1.mrna1;geneID=comp149850_c0_seq1.path1;Name=comp149850_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=451;mismatches=2;indels=1;unknowns=0;Target=comp149850_c0_seq1 454 1 .;CDS_Target=comp149850_c0_seq1 335 231 .;locus=RLOC_00011430
Chr1	stalkie_big_nohaplotig	exon	134822221	134822673	99	+	.	Parent=comp149850_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134822450	134822554	.	+	0	Parent=comp149850_c0_seq1.mrna1
Chr1	gffcl	locus	134828680	134831089	.	+	.	ID=RLOC_00011431;geneIDs=FBgn0023536.1.path1;transcripts=FBgn0023536.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134828680	134831089	.	+	.	ID=FBgn0023536.1.mrna1;geneID=FBgn0023536.1.path1;Name=FBgn0023536.1;Dir=sensecoverage=100.0;identity=99.3;matches=2016;mismatches=15;indels=0;unknowns=0;locus=RLOC_00011431
Chr1	stalkie_big_nohaplotig	exon	134828680	134828998	98	+	.	Parent=FBgn0023536.1.mrna1;Target=FBgn0023536.1 1 319 +
Chr1	stalkie_big_nohaplotig	exon	134829056	134829265	100	+	.	Parent=FBgn0023536.1.mrna1;Target=FBgn0023536.1 320 529 +
Chr1	stalkie_big_nohaplotig	exon	134829332	134829534	100	+	.	Parent=FBgn0023536.1.mrna1;Target=FBgn0023536.1 530 732 +
Chr1	stalkie_big_nohaplotig	exon	134829590	134829871	99	+	.	Parent=FBgn0023536.1.mrna1;Target=FBgn0023536.1 733 1014 +
Chr1	stalkie_big_nohaplotig	exon	134829942	134830460	99	+	.	Parent=FBgn0023536.1.mrna1;Target=FBgn0023536.1 1015 1533 +
Chr1	stalkie_big_nohaplotig	exon	134830519	134830743	98	+	.	Parent=FBgn0023536.1.mrna1;Target=FBgn0023536.1 1534 1758 +
Chr1	stalkie_big_nohaplotig	exon	134830817	134831089	99	+	.	Parent=FBgn0023536.1.mrna1;Target=FBgn0023536.1 1759 2031 +
Chr1	stalkie_big_nohaplotig	CDS	134828680	134828998	.	+	0	Parent=FBgn0023536.1.mrna1;Target=FBgn0023536.1 1 319 +
Chr1	stalkie_big_nohaplotig	CDS	134829056	134829265	.	+	2	Parent=FBgn0023536.1.mrna1;Target=FBgn0023536.1 320 529 +
Chr1	stalkie_big_nohaplotig	CDS	134829332	134829534	.	+	2	Parent=FBgn0023536.1.mrna1;Target=FBgn0023536.1 530 732 +
Chr1	stalkie_big_nohaplotig	CDS	134829590	134829871	.	+	0	Parent=FBgn0023536.1.mrna1;Target=FBgn0023536.1 733 1014 +
Chr1	stalkie_big_nohaplotig	CDS	134829942	134830460	.	+	0	Parent=FBgn0023536.1.mrna1;Target=FBgn0023536.1 1015 1533 +
Chr1	stalkie_big_nohaplotig	CDS	134830519	134830743	.	+	0	Parent=FBgn0023536.1.mrna1;Target=FBgn0023536.1 1534 1758 +
Chr1	stalkie_big_nohaplotig	CDS	134830817	134831089	.	+	0	Parent=FBgn0023536.1.mrna1;Target=FBgn0023536.1 1759 2031 +
Chr1	gffcl	locus	134831973	134835083	.	-	.	ID=RLOC_00011432;geneIDs=FBgn0263143.1.path1;transcripts=FBgn0263143.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134831973	134835083	.	-	.	ID=FBgn0263143.1.mrna1;geneID=FBgn0263143.1.path1;Name=FBgn0263143.1;Dir=sensecoverage=100.0;identity=99.3;matches=2142;mismatches=15;indels=0;unknowns=0;locus=RLOC_00011432
Chr1	stalkie_big_nohaplotig	exon	134831973	134832169	96	-	.	Parent=FBgn0263143.1.mrna1;Target=FBgn0263143.1 1961 2157 +
Chr1	stalkie_big_nohaplotig	exon	134832232	134832437	99	-	.	Parent=FBgn0263143.1.mrna1;Target=FBgn0263143.1 1755 1960 +
Chr1	stalkie_big_nohaplotig	exon	134832871	134833052	98	-	.	Parent=FBgn0263143.1.mrna1;Target=FBgn0263143.1 1573 1754 +
Chr1	stalkie_big_nohaplotig	exon	134833108	134833756	99	-	.	Parent=FBgn0263143.1.mrna1;Target=FBgn0263143.1 924 1572 +
Chr1	stalkie_big_nohaplotig	exon	134833808	134834011	100	-	.	Parent=FBgn0263143.1.mrna1;Target=FBgn0263143.1 720 923 +
Chr1	stalkie_big_nohaplotig	exon	134834241	134834474	100	-	.	Parent=FBgn0263143.1.mrna1;Target=FBgn0263143.1 486 719 +
Chr1	stalkie_big_nohaplotig	exon	134834538	134834729	100	-	.	Parent=FBgn0263143.1.mrna1;Target=FBgn0263143.1 294 485 +
Chr1	stalkie_big_nohaplotig	exon	134834791	134835083	100	-	.	Parent=FBgn0263143.1.mrna1;Target=FBgn0263143.1 1 293 +
Chr1	stalkie_big_nohaplotig	CDS	134831973	134832169	.	-	2	Parent=FBgn0263143.1.mrna1;Target=FBgn0263143.1 1961 2157 +
Chr1	stalkie_big_nohaplotig	CDS	134832232	134832437	.	-	1	Parent=FBgn0263143.1.mrna1;Target=FBgn0263143.1 1755 1960 +
Chr1	stalkie_big_nohaplotig	CDS	134832871	134833052	.	-	0	Parent=FBgn0263143.1.mrna1;Target=FBgn0263143.1 1573 1754 +
Chr1	stalkie_big_nohaplotig	CDS	134833108	134833756	.	-	1	Parent=FBgn0263143.1.mrna1;Target=FBgn0263143.1 924 1572 +
Chr1	stalkie_big_nohaplotig	CDS	134833808	134834011	.	-	1	Parent=FBgn0263143.1.mrna1;Target=FBgn0263143.1 720 923 +
Chr1	stalkie_big_nohaplotig	CDS	134834241	134834474	.	-	1	Parent=FBgn0263143.1.mrna1;Target=FBgn0263143.1 486 719 +
Chr1	stalkie_big_nohaplotig	CDS	134834538	134834729	.	-	1	Parent=FBgn0263143.1.mrna1;Target=FBgn0263143.1 294 485 +
Chr1	stalkie_big_nohaplotig	CDS	134834791	134835083	.	-	0	Parent=FBgn0263143.1.mrna1;Target=FBgn0263143.1 1 293 +
Chr1	gffcl	locus	134836976	134842513	.	+	.	ID=RLOC_00011433;geneIDs=FBgn0029525.1.path1;transcripts=FBgn0029525.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134836976	134842513	.	+	.	ID=FBgn0029525.1.mrna1;geneID=FBgn0029525.1.path1;Name=FBgn0029525.1;Dir=sensecoverage=100.0;identity=98.8;matches=4164;mismatches=51;indels=0;unknowns=0;locus=RLOC_00011433
Chr1	stalkie_big_nohaplotig	exon	134836976	134837030	96	+	.	Parent=FBgn0029525.1.mrna1;Target=FBgn0029525.1 1 55 +
Chr1	stalkie_big_nohaplotig	exon	134837089	134839680	98	+	.	Parent=FBgn0029525.1.mrna1;Target=FBgn0029525.1 56 2647 +
Chr1	stalkie_big_nohaplotig	exon	134839741	134840258	98	+	.	Parent=FBgn0029525.1.mrna1;Target=FBgn0029525.1 2648 3165 +
Chr1	stalkie_big_nohaplotig	exon	134840335	134840661	98	+	.	Parent=FBgn0029525.1.mrna1;Target=FBgn0029525.1 3166 3492 +
Chr1	stalkie_big_nohaplotig	exon	134841649	134841786	98	+	.	Parent=FBgn0029525.1.mrna1;Target=FBgn0029525.1 3493 3630 +
Chr1	stalkie_big_nohaplotig	exon	134841856	134842281	99	+	.	Parent=FBgn0029525.1.mrna1;Target=FBgn0029525.1 3631 4056 +
Chr1	stalkie_big_nohaplotig	exon	134842355	134842513	98	+	.	Parent=FBgn0029525.1.mrna1;Target=FBgn0029525.1 4057 4215 +
Chr1	stalkie_big_nohaplotig	CDS	134836976	134837030	.	+	0	Parent=FBgn0029525.1.mrna1;Target=FBgn0029525.1 1 55 +
Chr1	stalkie_big_nohaplotig	CDS	134837089	134839680	.	+	2	Parent=FBgn0029525.1.mrna1;Target=FBgn0029525.1 56 2647 +
Chr1	stalkie_big_nohaplotig	CDS	134839741	134840258	.	+	2	Parent=FBgn0029525.1.mrna1;Target=FBgn0029525.1 2648 3165 +
Chr1	stalkie_big_nohaplotig	CDS	134840335	134840661	.	+	0	Parent=FBgn0029525.1.mrna1;Target=FBgn0029525.1 3166 3492 +
Chr1	stalkie_big_nohaplotig	CDS	134841649	134841786	.	+	0	Parent=FBgn0029525.1.mrna1;Target=FBgn0029525.1 3493 3630 +
Chr1	stalkie_big_nohaplotig	CDS	134841856	134842281	.	+	0	Parent=FBgn0029525.1.mrna1;Target=FBgn0029525.1 3631 4056 +
Chr1	stalkie_big_nohaplotig	CDS	134842355	134842513	.	+	0	Parent=FBgn0029525.1.mrna1;Target=FBgn0029525.1 4057 4215 +
Chr1	gffcl	locus	134843562	134844241	.	-	.	ID=RLOC_00011434;geneIDs=FBgn0029522.1.path1;transcripts=FBgn0029522.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134843562	134844241	.	-	.	ID=FBgn0029522.1.mrna1;geneID=FBgn0029522.1.path1;Name=FBgn0029522.1;Dir=sensecoverage=100.0;identity=98.7;matches=533;mismatches=7;indels=0;unknowns=0;locus=RLOC_00011434
Chr1	stalkie_big_nohaplotig	exon	134843562	134843613	98	-	.	Parent=FBgn0029522.1.mrna1;Target=FBgn0029522.1 489 540 +
Chr1	stalkie_big_nohaplotig	exon	134843677	134843986	98	-	.	Parent=FBgn0029522.1.mrna1;Target=FBgn0029522.1 179 488 +
Chr1	stalkie_big_nohaplotig	exon	134844064	134844241	99	-	.	Parent=FBgn0029522.1.mrna1;Target=FBgn0029522.1 1 178 +
Chr1	stalkie_big_nohaplotig	CDS	134843562	134843613	.	-	1	Parent=FBgn0029522.1.mrna1;Target=FBgn0029522.1 489 540 +
Chr1	stalkie_big_nohaplotig	CDS	134843677	134843986	.	-	2	Parent=FBgn0029522.1.mrna1;Target=FBgn0029522.1 179 488 +
Chr1	stalkie_big_nohaplotig	CDS	134844064	134844241	.	-	0	Parent=FBgn0029522.1.mrna1;Target=FBgn0029522.1 1 178 +
Chr1	gffcl	locus	134864033	134865581	.	-	.	ID=RLOC_00011436;geneIDs=comp158286_c1_seq1.path1;transcripts=comp158286_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134864033	134865581	.	-	.	ID=comp158286_c1_seq1.mrna1;geneID=comp158286_c1_seq1.path1;Name=comp158286_c1_seq1;Dir=indeterminatecoverage=94.8;identity=94.4;matches=1487;mismatches=55;indels=34;unknowns=0;Target=comp158286_c1_seq1 1569 1 .;CDS_Target=comp158286_c1_seq1 1094 1062 .;locus=RLOC_00011436
Chr1	stalkie_big_nohaplotig	exon	134864033	134865581	94	-	.	Parent=comp158286_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134864504	134864536	.	-	0	Parent=comp158286_c1_seq1.mrna1
Chr1	gffcl	locus	134873355	134874830	.	-	.	ID=RLOC_00011437;geneIDs=FBgn0030761.1.path1;transcripts=FBgn0030761.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134873355	134874830	.	-	.	ID=FBgn0030761.1.mrna1;geneID=FBgn0030761.1.path1;Name=FBgn0030761.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1465;mismatches=11;indels=0;unknowns=0;Target=FBgn0030761.1 1476 1 .;locus=RLOC_00011437
Chr1	stalkie_big_nohaplotig	exon	134873355	134874830	99	-	.	Parent=FBgn0030761.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134873355	134874830	.	-	0	Parent=FBgn0030761.1.mrna1
Chr1	gffcl	locus	134875960	134876653	.	+	.	ID=RLOC_00011438;geneIDs=FBgn0030481.1.path1;transcripts=FBgn0030481.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134875960	134876653	.	+	.	ID=FBgn0030481.1.mrna1;geneID=FBgn0030481.1.path1;Name=FBgn0030481.1;Dir=sensecoverage=100.0;identity=99.5;matches=630;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011438
Chr1	stalkie_big_nohaplotig	exon	134875960	134875975	100	+	.	Parent=FBgn0030481.1.mrna1;Target=FBgn0030481.1 1 16 +
Chr1	stalkie_big_nohaplotig	exon	134876037	134876653	99	+	.	Parent=FBgn0030481.1.mrna1;Target=FBgn0030481.1 17 633 +
Chr1	stalkie_big_nohaplotig	CDS	134875960	134875975	.	+	0	Parent=FBgn0030481.1.mrna1;Target=FBgn0030481.1 1 16 +
Chr1	stalkie_big_nohaplotig	CDS	134876037	134876653	.	+	2	Parent=FBgn0030481.1.mrna1;Target=FBgn0030481.1 17 633 +
Chr1	gffcl	locus	134880566	134956893	.	+	.	ID=RLOC_00011440;geneIDs=FBgn0261610.1.path1,comp161201_c1_seq1.path1;transcripts=comp161201_c1_seq1.mrna1,FBgn0261610.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134880566	134955625	.	+	.	ID=comp161201_c1_seq1.mrna1;geneID=comp161201_c1_seq1.path1;Name=comp161201_c1_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=3492;mismatches=21;indels=2;unknowns=0;locus=RLOC_00011440
Chr1	stalkie_big_nohaplotig	exon	134880566	134881582	99	+	.	Parent=comp161201_c1_seq1.mrna1;Target=comp161201_c1_seq1 1 1018 +
Chr1	stalkie_big_nohaplotig	exon	134944835	134945846	99	+	.	Parent=comp161201_c1_seq1.mrna1;Target=comp161201_c1_seq1 1019 2030 +
Chr1	stalkie_big_nohaplotig	exon	134945914	134946127	99	+	.	Parent=comp161201_c1_seq1.mrna1;Target=comp161201_c1_seq1 2031 2244 +
Chr1	stalkie_big_nohaplotig	exon	134946200	134946771	99	+	.	Parent=comp161201_c1_seq1.mrna1;Target=comp161201_c1_seq1 2245 2816 +
Chr1	stalkie_big_nohaplotig	exon	134954837	134955018	99	+	.	Parent=comp161201_c1_seq1.mrna1;Target=comp161201_c1_seq1 2817 2998 +
Chr1	stalkie_big_nohaplotig	exon	134955109	134955625	99	+	.	Parent=comp161201_c1_seq1.mrna1;Target=comp161201_c1_seq1 2999 3514 +
Chr1	stalkie_big_nohaplotig	CDS	134880908	134881582	.	+	0	Parent=comp161201_c1_seq1.mrna1;Target=comp161201_c1_seq1 344 1018 +
Chr1	stalkie_big_nohaplotig	CDS	134944835	134945846	.	+	0	Parent=comp161201_c1_seq1.mrna1;Target=comp161201_c1_seq1 1019 2030 +
Chr1	stalkie_big_nohaplotig	CDS	134945914	134946127	.	+	2	Parent=comp161201_c1_seq1.mrna1;Target=comp161201_c1_seq1 2031 2244 +
Chr1	stalkie_big_nohaplotig	CDS	134946200	134946771	.	+	1	Parent=comp161201_c1_seq1.mrna1;Target=comp161201_c1_seq1 2245 2816 +
Chr1	stalkie_big_nohaplotig	CDS	134954837	134955018	.	+	2	Parent=comp161201_c1_seq1.mrna1;Target=comp161201_c1_seq1 2817 2998 +
Chr1	stalkie_big_nohaplotig	CDS	134955109	134955300	.	+	0	Parent=comp161201_c1_seq1.mrna1;Target=comp161201_c1_seq1 2999 3190 +
Chr1	stalkie_big_nohaplotig	mRNA	134880890	134956893	.	+	.	ID=FBgn0261610.1.mrna1;geneID=FBgn0261610.1.path1;Name=FBgn0261610.1;Dir=sensecoverage=100.0;identity=99.4;matches=2929;mismatches=17;indels=0;unknowns=0;locus=RLOC_00011440
Chr1	stalkie_big_nohaplotig	exon	134880890	134881582	99	+	.	Parent=FBgn0261610.1.mrna1;Target=FBgn0261610.1 1 693 +
Chr1	stalkie_big_nohaplotig	exon	134944835	134945846	99	+	.	Parent=FBgn0261610.1.mrna1;Target=FBgn0261610.1 694 1705 +
Chr1	stalkie_big_nohaplotig	exon	134945914	134946127	99	+	.	Parent=FBgn0261610.1.mrna1;Target=FBgn0261610.1 1706 1919 +
Chr1	stalkie_big_nohaplotig	exon	134946200	134946771	99	+	.	Parent=FBgn0261610.1.mrna1;Target=FBgn0261610.1 1920 2491 +
Chr1	stalkie_big_nohaplotig	exon	134954837	134955018	99	+	.	Parent=FBgn0261610.1.mrna1;Target=FBgn0261610.1 2492 2673 +
Chr1	stalkie_big_nohaplotig	exon	134955109	134955261	100	+	.	Parent=FBgn0261610.1.mrna1;Target=FBgn0261610.1 2674 2826 +
Chr1	stalkie_big_nohaplotig	exon	134956774	134956893	99	+	.	Parent=FBgn0261610.1.mrna1;Target=FBgn0261610.1 2827 2946 +
Chr1	stalkie_big_nohaplotig	CDS	134880890	134881582	.	+	0	Parent=FBgn0261610.1.mrna1;Target=FBgn0261610.1 1 693 +
Chr1	stalkie_big_nohaplotig	CDS	134944835	134945846	.	+	0	Parent=FBgn0261610.1.mrna1;Target=FBgn0261610.1 694 1705 +
Chr1	stalkie_big_nohaplotig	CDS	134945914	134946127	.	+	2	Parent=FBgn0261610.1.mrna1;Target=FBgn0261610.1 1706 1919 +
Chr1	stalkie_big_nohaplotig	CDS	134946200	134946771	.	+	1	Parent=FBgn0261610.1.mrna1;Target=FBgn0261610.1 1920 2491 +
Chr1	stalkie_big_nohaplotig	CDS	134954837	134955018	.	+	2	Parent=FBgn0261610.1.mrna1;Target=FBgn0261610.1 2492 2673 +
Chr1	stalkie_big_nohaplotig	CDS	134955109	134955261	.	+	0	Parent=FBgn0261610.1.mrna1;Target=FBgn0261610.1 2674 2826 +
Chr1	stalkie_big_nohaplotig	CDS	134956774	134956893	.	+	0	Parent=FBgn0261610.1.mrna1;Target=FBgn0261610.1 2827 2946 +
Chr1	stalkie_big_nohaplotig	mRNA	134881744	134892211	.	-	.	ID=FBgn0029804.2.mrna1;geneID=FBgn0029804.2.path1;Name=FBgn0029804.2;Dir=sensecoverage=100.0;identity=99.2;matches=1414;mismatches=11;indels=0;unknowns=0;locus=RLOC_00011441
Chr1	stalkie_big_nohaplotig	exon	134881744	134882500	99	-	.	Parent=FBgn0029804.2.mrna1;Target=FBgn0029804.2 669 1425 +
Chr1	stalkie_big_nohaplotig	exon	134891274	134891427	98	-	.	Parent=FBgn0029804.2.mrna1;Target=FBgn0029804.2 515 668 +
Chr1	stalkie_big_nohaplotig	exon	134891614	134891808	100	-	.	Parent=FBgn0029804.2.mrna1;Target=FBgn0029804.2 320 514 +
Chr1	stalkie_big_nohaplotig	exon	134891893	134892211	99	-	.	Parent=FBgn0029804.2.mrna1;Target=FBgn0029804.2 1 319 +
Chr1	stalkie_big_nohaplotig	CDS	134881744	134882500	.	-	1	Parent=FBgn0029804.2.mrna1;Target=FBgn0029804.2 669 1425 +
Chr1	stalkie_big_nohaplotig	CDS	134891274	134891427	.	-	2	Parent=FBgn0029804.2.mrna1;Target=FBgn0029804.2 515 668 +
Chr1	stalkie_big_nohaplotig	CDS	134891614	134891808	.	-	2	Parent=FBgn0029804.2.mrna1;Target=FBgn0029804.2 320 514 +
Chr1	stalkie_big_nohaplotig	CDS	134891893	134892211	.	-	0	Parent=FBgn0029804.2.mrna1;Target=FBgn0029804.2 1 319 +
Chr1	gffcl	locus	134884172	134884811	.	+	.	ID=RLOC_00011442;geneIDs=comp144030_c0_seq1.path1;transcripts=comp144030_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134884172	134884811	.	+	.	ID=comp144030_c0_seq1.mrna1;geneID=comp144030_c0_seq1.path1;Name=comp144030_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.2;matches=584;mismatches=32;indels=24;unknowns=0;Target=comp144030_c0_seq1 616 1 .;CDS_Target=comp144030_c0_seq1 77 3 .;locus=RLOC_00011442
Chr1	stalkie_big_nohaplotig	exon	134884172	134884811	91	+	.	Parent=comp144030_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134884174	134884248	.	+	0	Parent=comp144030_c0_seq1.mrna1
Chr1	gffcl	locus	134918505	134931869	.	-	.	ID=RLOC_00011443;geneIDs=FBgn0029807.1.path1;transcripts=FBgn0029807.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134918505	134931869	.	-	.	ID=FBgn0029807.1.mrna1;geneID=FBgn0029807.1.path1;Name=FBgn0029807.1;Dir=sensecoverage=99.9;identity=98.2;matches=4526;mismatches=27;indels=54;unknowns=0;locus=RLOC_00011443
Chr1	stalkie_big_nohaplotig	exon	134918505	134918780	100	-	.	Parent=FBgn0029807.1.mrna1;Target=FBgn0029807.1 4282 4557 +
Chr1	stalkie_big_nohaplotig	exon	134919704	134920076	100	-	.	Parent=FBgn0029807.1.mrna1;Target=FBgn0029807.1 3909 4281 +
Chr1	stalkie_big_nohaplotig	exon	134920189	134920341	100	-	.	Parent=FBgn0029807.1.mrna1;Target=FBgn0029807.1 3756 3908 +
Chr1	stalkie_big_nohaplotig	exon	134920416	134920557	100	-	.	Parent=FBgn0029807.1.mrna1;Target=FBgn0029807.1 3614 3755 +
Chr1	stalkie_big_nohaplotig	exon	134924997	134925185	99	-	.	Parent=FBgn0029807.1.mrna1;Target=FBgn0029807.1 3425 3613 +
Chr1	stalkie_big_nohaplotig	exon	134928396	134931869	97	-	.	Parent=FBgn0029807.1.mrna1;Target=FBgn0029807.1 5 3424 +
Chr1	stalkie_big_nohaplotig	CDS	134918505	134918780	.	-	0	Parent=FBgn0029807.1.mrna1;Target=FBgn0029807.1 4282 4557 +
Chr1	stalkie_big_nohaplotig	CDS	134919704	134920076	.	-	1	Parent=FBgn0029807.1.mrna1;Target=FBgn0029807.1 3909 4281 +
Chr1	stalkie_big_nohaplotig	CDS	134920189	134920341	.	-	1	Parent=FBgn0029807.1.mrna1;Target=FBgn0029807.1 3756 3908 +
Chr1	stalkie_big_nohaplotig	CDS	134920416	134920557	.	-	2	Parent=FBgn0029807.1.mrna1;Target=FBgn0029807.1 3614 3755 +
Chr1	stalkie_big_nohaplotig	CDS	134924997	134925185	.	-	2	Parent=FBgn0029807.1.mrna1;Target=FBgn0029807.1 3425 3613 +
Chr1	stalkie_big_nohaplotig	CDS	134928396	134931867	.	-	0	Parent=FBgn0029807.1.mrna1;Target=FBgn0029807.1 7 3424 +
Chr1	gffcl	locus	134960876	134961305	.	-	.	ID=RLOC_00011444;geneIDs=comp140802_c0_seq1.path1;transcripts=comp140802_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134960876	134961305	.	-	.	ID=comp140802_c0_seq1.mrna1;geneID=comp140802_c0_seq1.path1;Name=comp140802_c0_seq1;Dir=indeterminatecoverage=96.5;identity=94.0;matches=404;mismatches=5;indels=21;unknowns=0;Target=comp140802_c0_seq1 424 16 .;CDS_Target=comp140802_c0_seq1 271 170 .;locus=RLOC_00011444
Chr1	stalkie_big_nohaplotig	exon	134960876	134961305	93	-	.	Parent=comp140802_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134961029	134961130	.	-	0	Parent=comp140802_c0_seq1.mrna1
Chr1	gffcl	locus	134964989	134965825	.	+	.	ID=RLOC_00011445;geneIDs=comp157049_c0_seq1.path1;transcripts=comp157049_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134964989	134965825	.	+	.	ID=comp157049_c0_seq1.mrna1;geneID=comp157049_c0_seq1.path1;Name=comp157049_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.8;matches=825;mismatches=12;indels=15;unknowns=0;Target=comp157049_c0_seq1 852 1 .;CDS_Target=comp157049_c0_seq1 851 162 .;locus=RLOC_00011445
Chr1	stalkie_big_nohaplotig	exon	134964989	134965825	96	+	.	Parent=comp157049_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134965135	134965824	.	+	0	Parent=comp157049_c0_seq1.mrna1
Chr1	gffcl	locus	134966398	134968286	.	-	.	ID=RLOC_00011446;geneIDs=comp66416_c0_seq1.path1;transcripts=comp66416_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134966398	134968286	.	-	.	ID=comp66416_c0_seq1.mrna1;geneID=comp66416_c0_seq1.path1;Name=comp66416_c0_seq1;Dir=antisensecoverage=100.0;identity=83.3;matches=214;mismatches=43;indels=0;unknowns=0;locus=RLOC_00011446
Chr1	stalkie_big_nohaplotig	exon	134966398	134966521	83	-	.	Parent=comp66416_c0_seq1.mrna1;Target=comp66416_c0_seq1 1 124 -
Chr1	stalkie_big_nohaplotig	exon	134968154	134968286	82	-	.	Parent=comp66416_c0_seq1.mrna1;Target=comp66416_c0_seq1 126 258 -
Chr1	stalkie_big_nohaplotig	CDS	134966423	134966521	.	-	1	Parent=comp66416_c0_seq1.mrna1;Target=comp66416_c0_seq1 26 124 .
Chr1	stalkie_big_nohaplotig	CDS	134968154	134968284	.	-	0	Parent=comp66416_c0_seq1.mrna1;Target=comp66416_c0_seq1 126 256 .
Chr1	gffcl	locus	134974135	134974201	.	-	.	ID=RLOC_00011447;geneIDs=FBgn0031116.1.path1;transcripts=FBgn0031116.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134974135	134974201	.	-	.	ID=FBgn0031116.1.mrna1;geneID=FBgn0031116.1.path1;Name=FBgn0031116.1;Dir=indeterminatecoverage=1.8;identity=100.0;matches=67;mismatches=0;indels=0;unknowns=0;Target=FBgn0031116.1 67 1 .;locus=RLOC_00011447
Chr1	stalkie_big_nohaplotig	exon	134974135	134974201	100	-	.	Parent=FBgn0031116.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134974135	134974201	.	-	0	Parent=FBgn0031116.1.mrna1
Chr1	gffcl	locus	134978253	134980034	.	+	.	ID=RLOC_00011448;geneIDs=FBgn0040309.1.path1;transcripts=FBgn0040309.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134978253	134980034	.	+	.	ID=FBgn0040309.1.mrna1;geneID=FBgn0040309.1.path1;Name=FBgn0040309.1;Dir=sensecoverage=100.0;identity=99.8;matches=650;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011448
Chr1	stalkie_big_nohaplotig	exon	134978253	134978321	100	+	.	Parent=FBgn0040309.1.mrna1;Target=FBgn0040309.1 1 69 +
Chr1	stalkie_big_nohaplotig	exon	134979453	134980034	99	+	.	Parent=FBgn0040309.1.mrna1;Target=FBgn0040309.1 70 651 +
Chr1	stalkie_big_nohaplotig	CDS	134978253	134978321	.	+	0	Parent=FBgn0040309.1.mrna1;Target=FBgn0040309.1 1 69 +
Chr1	stalkie_big_nohaplotig	CDS	134979453	134980034	.	+	0	Parent=FBgn0040309.1.mrna1;Target=FBgn0040309.1 70 651 +
Chr1	gffcl	locus	134991091	134991489	.	-	.	ID=RLOC_00011449;geneIDs=FBgn0010198.1.path1;transcripts=FBgn0010198.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134991091	134991489	.	-	.	ID=FBgn0010198.1.mrna1;geneID=FBgn0010198.1.path1;Name=FBgn0010198.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=397;mismatches=2;indels=0;unknowns=0;Target=FBgn0010198.1 399 1 .;locus=RLOC_00011449
Chr1	stalkie_big_nohaplotig	exon	134991091	134991489	99	-	.	Parent=FBgn0010198.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	134991091	134991489	.	-	0	Parent=FBgn0010198.1.mrna1
Chr1	gffcl	locus	134997489	135033547	.	+	.	ID=RLOC_00011450;geneIDs=FBgn0030234.1.path1,comp153868_c0_seq1.path1;transcripts=FBgn0030234.1.mrna1,comp153868_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	134997489	135033547	.	+	.	ID=FBgn0030234.1.mrna1;geneID=FBgn0030234.1.path1;Name=FBgn0030234.1;Dir=sensecoverage=100.0;identity=99.4;matches=519;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011450
Chr1	stalkie_big_nohaplotig	exon	134997489	134997644	100	+	.	Parent=FBgn0030234.1.mrna1;Target=FBgn0030234.1 1 156 +
Chr1	stalkie_big_nohaplotig	exon	135031329	135031496	99	+	.	Parent=FBgn0030234.1.mrna1;Target=FBgn0030234.1 157 324 +
Chr1	stalkie_big_nohaplotig	exon	135033350	135033547	98	+	.	Parent=FBgn0030234.1.mrna1;Target=FBgn0030234.1 325 522 +
Chr1	stalkie_big_nohaplotig	CDS	134997489	134997644	.	+	0	Parent=FBgn0030234.1.mrna1;Target=FBgn0030234.1 1 156 +
Chr1	stalkie_big_nohaplotig	CDS	135031329	135031496	.	+	0	Parent=FBgn0030234.1.mrna1;Target=FBgn0030234.1 157 324 +
Chr1	stalkie_big_nohaplotig	CDS	135033350	135033547	.	+	0	Parent=FBgn0030234.1.mrna1;Target=FBgn0030234.1 325 522 +
Chr1	stalkie_big_nohaplotig	mRNA	135031474	135032520	.	+	.	ID=comp153868_c0_seq1.mrna1;geneID=comp153868_c0_seq1.path1;Name=comp153868_c0_seq1;Dir=sensecoverage=100.0;identity=78.6;matches=738;mismatches=68;indels=133;unknowns=0;Target=comp153868_c0_seq1 72 128 +;locus=RLOC_00011450
Chr1	stalkie_big_nohaplotig	exon	135031474	135032246	76	+	.	Parent=comp153868_c0_seq1.mrna1;Target=comp153868_c0_seq1 1 710 +
Chr1	stalkie_big_nohaplotig	exon	135032385	135032520	88	+	.	Parent=comp153868_c0_seq1.mrna1;Target=comp153868_c0_seq1 711 836 +
Chr1	stalkie_big_nohaplotig	CDS	135031555	135031635	.	+	0	Parent=comp153868_c0_seq1.mrna1
Chr1	gffcl	locus	135026931	135027711	.	+	.	ID=RLOC_00011451;geneIDs=comp142638_c2_seq1.path1;transcripts=comp142638_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135026931	135027711	.	+	.	ID=comp142638_c2_seq1.mrna1;geneID=comp142638_c2_seq1.path1;Name=comp142638_c2_seq1;Dir=indeterminatecoverage=100.0;identity=96.8;matches=758;mismatches=21;indels=4;unknowns=0;Target=comp142638_c2_seq1 781 1 .;CDS_Target=comp142638_c2_seq1 646 563 .;locus=RLOC_00011451
Chr1	stalkie_big_nohaplotig	exon	135026931	135027711	96	+	.	Parent=comp142638_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	135027495	135027578	.	+	0	Parent=comp142638_c2_seq1.mrna1
Chr1	gffcl	locus	135036634	135037851	.	+	.	ID=RLOC_00011452;geneIDs=comp160349_c0_seq1.path1;transcripts=comp160349_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135036634	135037851	.	+	.	ID=comp160349_c0_seq1.mrna1;geneID=comp160349_c0_seq1.path1;Name=comp160349_c0_seq1;Dir=indeterminatecoverage=98.3;identity=88.3;matches=1163;mismatches=55;indels=99;unknowns=0;Target=comp160349_c0_seq1 1328 12 .;CDS_Target=comp160349_c0_seq1 448 284 .;locus=RLOC_00011452
Chr1	stalkie_big_nohaplotig	exon	135036634	135037851	88	+	.	Parent=comp160349_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	135036905	135037069	.	+	0	Parent=comp160349_c0_seq1.mrna1
Chr1	gffcl	locus	135039154	135061410	.	-	.	ID=RLOC_00011453;geneIDs=FBgn0030276.1.path1;transcripts=FBgn0030276.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135039154	135061410	.	-	.	ID=FBgn0030276.1.mrna1;geneID=FBgn0030276.1.path1;Name=FBgn0030276.1;Dir=sensecoverage=100.0;identity=99.9;matches=1468;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011453
Chr1	stalkie_big_nohaplotig	exon	135039154	135039402	99	-	.	Parent=FBgn0030276.1.mrna1;Target=FBgn0030276.1 1222 1470 +
Chr1	stalkie_big_nohaplotig	exon	135044686	135044865	99	-	.	Parent=FBgn0030276.1.mrna1;Target=FBgn0030276.1 1042 1221 +
Chr1	stalkie_big_nohaplotig	exon	135044924	135045035	100	-	.	Parent=FBgn0030276.1.mrna1;Target=FBgn0030276.1 930 1041 +
Chr1	stalkie_big_nohaplotig	exon	135046747	135046976	100	-	.	Parent=FBgn0030276.1.mrna1;Target=FBgn0030276.1 700 929 +
Chr1	stalkie_big_nohaplotig	exon	135047042	135047442	100	-	.	Parent=FBgn0030276.1.mrna1;Target=FBgn0030276.1 299 699 +
Chr1	stalkie_big_nohaplotig	exon	135047513	135047703	100	-	.	Parent=FBgn0030276.1.mrna1;Target=FBgn0030276.1 108 298 +
Chr1	stalkie_big_nohaplotig	exon	135061304	135061410	100	-	.	Parent=FBgn0030276.1.mrna1;Target=FBgn0030276.1 1 107 +
Chr1	stalkie_big_nohaplotig	CDS	135039154	135039402	.	-	0	Parent=FBgn0030276.1.mrna1;Target=FBgn0030276.1 1222 1470 +
Chr1	stalkie_big_nohaplotig	CDS	135044686	135044865	.	-	0	Parent=FBgn0030276.1.mrna1;Target=FBgn0030276.1 1042 1221 +
Chr1	stalkie_big_nohaplotig	CDS	135044924	135045035	.	-	1	Parent=FBgn0030276.1.mrna1;Target=FBgn0030276.1 930 1041 +
Chr1	stalkie_big_nohaplotig	CDS	135046747	135046976	.	-	0	Parent=FBgn0030276.1.mrna1;Target=FBgn0030276.1 700 929 +
Chr1	stalkie_big_nohaplotig	CDS	135047042	135047442	.	-	2	Parent=FBgn0030276.1.mrna1;Target=FBgn0030276.1 299 699 +
Chr1	stalkie_big_nohaplotig	CDS	135047513	135047703	.	-	1	Parent=FBgn0030276.1.mrna1;Target=FBgn0030276.1 108 298 +
Chr1	stalkie_big_nohaplotig	CDS	135061304	135061410	.	-	0	Parent=FBgn0030276.1.mrna1;Target=FBgn0030276.1 1 107 +
Chr1	gffcl	locus	135052582	135056193	.	+	.	ID=RLOC_00011454;geneIDs=FBgn0052668.1.path1;transcripts=FBgn0052668.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135052582	135056193	.	+	.	ID=FBgn0052668.1.mrna1;geneID=FBgn0052668.1.path1;Name=FBgn0052668.1;Dir=sensecoverage=99.7;identity=99.1;matches=2215;mismatches=20;indels=0;unknowns=0;locus=RLOC_00011454
Chr1	stalkie_big_nohaplotig	exon	135052582	135052812	97	+	.	Parent=FBgn0052668.1.mrna1;Target=FBgn0052668.1 7 237 +
Chr1	stalkie_big_nohaplotig	exon	135053653	135053790	97	+	.	Parent=FBgn0052668.1.mrna1;Target=FBgn0052668.1 238 375 +
Chr1	stalkie_big_nohaplotig	exon	135053854	135054536	99	+	.	Parent=FBgn0052668.1.mrna1;Target=FBgn0052668.1 376 1058 +
Chr1	stalkie_big_nohaplotig	exon	135054701	135054884	99	+	.	Parent=FBgn0052668.1.mrna1;Target=FBgn0052668.1 1059 1242 +
Chr1	stalkie_big_nohaplotig	exon	135055132	135055377	100	+	.	Parent=FBgn0052668.1.mrna1;Target=FBgn0052668.1 1243 1488 +
Chr1	stalkie_big_nohaplotig	exon	135055441	135056193	98	+	.	Parent=FBgn0052668.1.mrna1;Target=FBgn0052668.1 1489 2241 +
Chr1	stalkie_big_nohaplotig	CDS	135052582	135052812	.	+	0	Parent=FBgn0052668.1.mrna1;Target=FBgn0052668.1 7 237 +
Chr1	stalkie_big_nohaplotig	CDS	135053653	135053790	.	+	0	Parent=FBgn0052668.1.mrna1;Target=FBgn0052668.1 238 375 +
Chr1	stalkie_big_nohaplotig	CDS	135053854	135054536	.	+	0	Parent=FBgn0052668.1.mrna1;Target=FBgn0052668.1 376 1058 +
Chr1	stalkie_big_nohaplotig	CDS	135054701	135054884	.	+	1	Parent=FBgn0052668.1.mrna1;Target=FBgn0052668.1 1059 1242 +
Chr1	stalkie_big_nohaplotig	CDS	135055132	135055377	.	+	0	Parent=FBgn0052668.1.mrna1;Target=FBgn0052668.1 1243 1488 +
Chr1	stalkie_big_nohaplotig	CDS	135055441	135056193	.	+	0	Parent=FBgn0052668.1.mrna1;Target=FBgn0052668.1 1489 2241 +
Chr1	gffcl	locus	135060338	135060993	.	-	.	ID=RLOC_00011455;geneIDs=comp152297_c0_seq1.path1;transcripts=comp152297_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135060338	135060993	.	-	.	ID=comp152297_c0_seq1.mrna1;geneID=comp152297_c0_seq1.path1;Name=comp152297_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=655;mismatches=1;indels=1;unknowns=0;Target=comp152297_c0_seq1 657 1 .;CDS_Target=comp152297_c0_seq1 382 245 .;locus=RLOC_00011455
Chr1	stalkie_big_nohaplotig	exon	135060338	135060993	99	-	.	Parent=comp152297_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	135060613	135060750	.	-	0	Parent=comp152297_c0_seq1.mrna1
Chr1	gffcl	locus	135063161	135063985	.	+	.	ID=RLOC_00011456;geneIDs=comp152335_c0_seq1.path1;transcripts=comp152335_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135063161	135063985	.	+	.	ID=comp152335_c0_seq1.mrna1;geneID=comp152335_c0_seq1.path1;Name=comp152335_c0_seq1;Dir=antisensecoverage=51.5;identity=98.0;matches=750;mismatches=12;indels=3;unknowns=0;locus=RLOC_00011456
Chr1	stalkie_big_nohaplotig	exon	135063161	135063644	97	+	.	Parent=comp152335_c0_seq1.mrna1;Target=comp152335_c0_seq1 998 1479 -
Chr1	stalkie_big_nohaplotig	exon	135063705	135063985	98	+	.	Parent=comp152335_c0_seq1.mrna1;Target=comp152335_c0_seq1 718 997 -
Chr1	stalkie_big_nohaplotig	CDS	135063456	135063644	.	+	0	Parent=comp152335_c0_seq1.mrna1;Target=comp152335_c0_seq1 998 1186 .
Chr1	stalkie_big_nohaplotig	CDS	135063705	135063764	.	+	0	Parent=comp152335_c0_seq1.mrna1;Target=comp152335_c0_seq1 938 997 .
Chr1	gffcl	locus	135065337	135066659	.	-	.	ID=RLOC_00011457;geneIDs=FBgn0028665.1.path1;transcripts=FBgn0028665.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135065337	135066659	.	-	.	ID=FBgn0028665.1.mrna1;geneID=FBgn0028665.1.path1;Name=FBgn0028665.1;Dir=sensecoverage=100.0;identity=100.0;matches=1056;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011457
Chr1	stalkie_big_nohaplotig	exon	135065337	135065750	100	-	.	Parent=FBgn0028665.1.mrna1;Target=FBgn0028665.1 643 1056 +
Chr1	stalkie_big_nohaplotig	exon	135065817	135066325	100	-	.	Parent=FBgn0028665.1.mrna1;Target=FBgn0028665.1 134 642 +
Chr1	stalkie_big_nohaplotig	exon	135066527	135066659	100	-	.	Parent=FBgn0028665.1.mrna1;Target=FBgn0028665.1 1 133 +
Chr1	stalkie_big_nohaplotig	CDS	135065337	135065750	.	-	0	Parent=FBgn0028665.1.mrna1;Target=FBgn0028665.1 643 1056 +
Chr1	stalkie_big_nohaplotig	CDS	135065817	135066325	.	-	2	Parent=FBgn0028665.1.mrna1;Target=FBgn0028665.1 134 642 +
Chr1	stalkie_big_nohaplotig	CDS	135066527	135066659	.	-	0	Parent=FBgn0028665.1.mrna1;Target=FBgn0028665.1 1 133 +
Chr1	gffcl	locus	135068552	135069679	.	-	.	ID=RLOC_00011458;geneIDs=comp146540_c0_seq1.path1;transcripts=comp146540_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135068552	135069679	.	-	.	ID=comp146540_c0_seq1.mrna1;geneID=comp146540_c0_seq1.path1;Name=comp146540_c0_seq1;Dir=indeterminatecoverage=99.0;identity=98.6;matches=1112;mismatches=12;indels=4;unknowns=0;Target=comp146540_c0_seq1 1135 12 .;CDS_Target=comp146540_c0_seq1 389 309 .;locus=RLOC_00011458
Chr1	stalkie_big_nohaplotig	exon	135068552	135069679	98	-	.	Parent=comp146540_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	135069302	135069382	.	-	0	Parent=comp146540_c0_seq1.mrna1
Chr1	gffcl	locus	135069960	135070759	.	-	.	ID=RLOC_00011459;geneIDs=comp155339_c0_seq1.path1;transcripts=comp155339_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135069960	135070759	.	-	.	ID=comp155339_c0_seq1.mrna1;geneID=comp155339_c0_seq1.path1;Name=comp155339_c0_seq1;Dir=indeterminatecoverage=99.5;identity=98.9;matches=797;mismatches=3;indels=6;unknowns=0;Target=comp155339_c0_seq1 810 5 .;CDS_Target=comp155339_c0_seq1 93 7 .;locus=RLOC_00011459
Chr1	stalkie_big_nohaplotig	exon	135069960	135070759	98	-	.	Parent=comp155339_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	135070671	135070757	.	-	0	Parent=comp155339_c0_seq1.mrna1
Chr1	gffcl	locus	135072259	135073113	.	.	.	ID=RLOC_00011460;geneIDs=comp147763_c0_seq1.path1,comp159402_c0_seq1.path1;transcripts=comp159402_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135072649	135073113	.	+	.	ID=comp159402_c0_seq1.mrna1;geneID=comp159402_c0_seq1.path1;Name=comp159402_c0_seq1;Dir=indeterminatecoverage=34.8;identity=99.6;matches=465;mismatches=0;indels=2;unknowns=0;Target=comp159402_c0_seq1 1073 607 .;CDS_Target=comp159402_c0_seq1 725 609 .;locus=RLOC_00011460
Chr1	stalkie_big_nohaplotig	exon	135072649	135073113	99	+	.	Parent=comp159402_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	135072651	135072767	.	+	0	Parent=comp159402_c0_seq1.mrna1
Chr1	gffcl	locus	135077401	135126732	.	-	.	ID=RLOC_00011461;geneIDs=FBgn0002968.1.path1;transcripts=FBgn0002968.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135077401	135126732	.	-	.	ID=FBgn0002968.1.mrna1;geneID=FBgn0002968.1.path1;Name=FBgn0002968.1;Dir=sensecoverage=100.0;identity=99.9;matches=3547;mismatches=4;indels=1;unknowns=0;locus=RLOC_00011461
Chr1	stalkie_big_nohaplotig	exon	135077401	135077450	100	-	.	Parent=FBgn0002968.1.mrna1;Target=FBgn0002968.1 3503 3552 +
Chr1	stalkie_big_nohaplotig	exon	135078382	135078485	100	-	.	Parent=FBgn0002968.1.mrna1;Target=FBgn0002968.1 3399 3502 +
Chr1	stalkie_big_nohaplotig	exon	135078553	135078936	99	-	.	Parent=FBgn0002968.1.mrna1;Target=FBgn0002968.1 3015 3398 +
Chr1	stalkie_big_nohaplotig	exon	135079001	135079165	100	-	.	Parent=FBgn0002968.1.mrna1;Target=FBgn0002968.1 2850 3014 +
Chr1	stalkie_big_nohaplotig	exon	135079242	135079818	100	-	.	Parent=FBgn0002968.1.mrna1;Target=FBgn0002968.1 2273 2849 +
Chr1	stalkie_big_nohaplotig	exon	135079893	135082129	99	-	.	Parent=FBgn0002968.1.mrna1;Target=FBgn0002968.1 35 2272 +
Chr1	stalkie_big_nohaplotig	exon	135126699	135126732	100	-	.	Parent=FBgn0002968.1.mrna1;Target=FBgn0002968.1 1 34 +
Chr1	stalkie_big_nohaplotig	CDS	135082097	135082129	.	-	1	Parent=FBgn0002968.1.mrna1;Target=FBgn0002968.1 35 68 +
Chr1	stalkie_big_nohaplotig	CDS	135126699	135126730	.	-	0	Parent=FBgn0002968.1.mrna1;Target=FBgn0002968.1 3 34 +
Chr1	gffcl	locus	135164478	135166290	.	+	.	ID=RLOC_00011463;geneIDs=FBgn0014455.1.path1;transcripts=FBgn0014455.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135164478	135166290	.	+	.	ID=FBgn0014455.1.mrna1;geneID=FBgn0014455.1.path1;Name=FBgn0014455.1;Dir=sensecoverage=100.0;identity=99.4;matches=1312;mismatches=8;indels=0;unknowns=0;locus=RLOC_00011463
Chr1	stalkie_big_nohaplotig	exon	135164478	135164526	100	+	.	Parent=FBgn0014455.1.mrna1;Target=FBgn0014455.1 1 49 +
Chr1	stalkie_big_nohaplotig	exon	135164657	135164847	98	+	.	Parent=FBgn0014455.1.mrna1;Target=FBgn0014455.1 50 240 +
Chr1	stalkie_big_nohaplotig	exon	135165083	135165198	100	+	.	Parent=FBgn0014455.1.mrna1;Target=FBgn0014455.1 241 356 +
Chr1	stalkie_big_nohaplotig	exon	135165262	135165487	99	+	.	Parent=FBgn0014455.1.mrna1;Target=FBgn0014455.1 357 582 +
Chr1	stalkie_big_nohaplotig	exon	135165553	135166290	99	+	.	Parent=FBgn0014455.1.mrna1;Target=FBgn0014455.1 583 1320 +
Chr1	stalkie_big_nohaplotig	CDS	135164478	135164526	.	+	0	Parent=FBgn0014455.1.mrna1;Target=FBgn0014455.1 1 49 +
Chr1	stalkie_big_nohaplotig	CDS	135164657	135164847	.	+	2	Parent=FBgn0014455.1.mrna1;Target=FBgn0014455.1 50 240 +
Chr1	stalkie_big_nohaplotig	CDS	135165083	135165198	.	+	0	Parent=FBgn0014455.1.mrna1;Target=FBgn0014455.1 241 356 +
Chr1	stalkie_big_nohaplotig	CDS	135165262	135165487	.	+	1	Parent=FBgn0014455.1.mrna1;Target=FBgn0014455.1 357 582 +
Chr1	stalkie_big_nohaplotig	CDS	135165553	135166290	.	+	0	Parent=FBgn0014455.1.mrna1;Target=FBgn0014455.1 583 1320 +
Chr1	gffcl	locus	135168507	135172029	.	+	.	ID=RLOC_00011464;geneIDs=FBgn0030638.1.path1;transcripts=FBgn0030638.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135168507	135172029	.	+	.	ID=FBgn0030638.1.mrna1;geneID=FBgn0030638.1.path1;Name=FBgn0030638.1;Dir=sensecoverage=100.0;identity=99.7;matches=1089;mismatches=2;indels=1;unknowns=0;locus=RLOC_00011464
Chr1	stalkie_big_nohaplotig	exon	135168507	135168696	100	+	.	Parent=FBgn0030638.1.mrna1;Target=FBgn0030638.1 1 190 +
Chr1	stalkie_big_nohaplotig	exon	135171067	135171908	99	+	.	Parent=FBgn0030638.1.mrna1;Target=FBgn0030638.1 191 1033 +
Chr1	stalkie_big_nohaplotig	exon	135171971	135172029	100	+	.	Parent=FBgn0030638.1.mrna1;Target=FBgn0030638.1 1034 1092 +
Chr1	stalkie_big_nohaplotig	CDS	135168507	135168696	.	+	0	Parent=FBgn0030638.1.mrna1;Target=FBgn0030638.1 1 190 +
Chr1	stalkie_big_nohaplotig	CDS	135171067	135171908	.	+	2	Parent=FBgn0030638.1.mrna1;Target=FBgn0030638.1 191 1033 +
Chr1	stalkie_big_nohaplotig	CDS	135171971	135172029	.	+	0	Parent=FBgn0030638.1.mrna1;Target=FBgn0030638.1 1034 1092 +
Chr1	gffcl	locus	135168990	135171017	.	-	.	ID=RLOC_00011465;geneIDs=comp163840_c0_seq1.path1;transcripts=comp163840_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135168990	135171017	.	-	.	ID=comp163840_c0_seq1.mrna1;geneID=comp163840_c0_seq1.path1;Name=comp163840_c0_seq1;Dir=indeterminatecoverage=87.2;identity=96.6;matches=1983;mismatches=44;indels=25;unknowns=0;Target=comp163840_c0_seq1 2051 1 .;CDS_Target=comp163840_c0_seq1 742 581 .;locus=RLOC_00011465
Chr1	stalkie_big_nohaplotig	exon	135168990	135171017	96	-	.	Parent=comp163840_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	135170293	135170442	.	-	0	Parent=comp163840_c0_seq1.mrna1
Chr1	gffcl	locus	135172901	135173105	.	+	.	ID=RLOC_00011466;geneIDs=comp97915_c0_seq1.path1;transcripts=comp97915_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135172901	135173105	.	+	.	ID=comp97915_c0_seq1.mrna1;geneID=comp97915_c0_seq1.path1;Name=comp97915_c0_seq1;Dir=indeterminatecoverage=97.2;identity=96.1;matches=197;mismatches=8;indels=0;unknowns=0;Target=comp97915_c0_seq1 211 7 .;CDS_Target=comp97915_c0_seq1 110 9 .;locus=RLOC_00011466
Chr1	stalkie_big_nohaplotig	exon	135172901	135173105	96	+	.	Parent=comp97915_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	135172903	135173004	.	+	0	Parent=comp97915_c0_seq1.mrna1
Chr1	gffcl	locus	135174372	135182476	.	-	.	ID=RLOC_00011467;geneIDs=FBgn0004391.1.path1;transcripts=FBgn0004391.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135174372	135182476	.	-	.	ID=FBgn0004391.1.mrna1;geneID=FBgn0004391.1.path1;Name=FBgn0004391.1;Dir=sensecoverage=100.0;identity=99.4;matches=5792;mismatches=34;indels=0;unknowns=0;locus=RLOC_00011467
Chr1	stalkie_big_nohaplotig	exon	135174372	135174791	98	-	.	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 5407 5826 +
Chr1	stalkie_big_nohaplotig	exon	135174860	135175187	99	-	.	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 5079 5406 +
Chr1	stalkie_big_nohaplotig	exon	135175249	135175503	99	-	.	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 4824 5078 +
Chr1	stalkie_big_nohaplotig	exon	135175575	135176009	99	-	.	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 4389 4823 +
Chr1	stalkie_big_nohaplotig	exon	135176122	135176656	99	-	.	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 3854 4388 +
Chr1	stalkie_big_nohaplotig	exon	135176723	135176902	97	-	.	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 3674 3853 +
Chr1	stalkie_big_nohaplotig	exon	135176963	135177847	99	-	.	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 2789 3673 +
Chr1	stalkie_big_nohaplotig	exon	135177988	135178150	100	-	.	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 2626 2788 +
Chr1	stalkie_big_nohaplotig	exon	135178215	135178478	100	-	.	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 2362 2625 +
Chr1	stalkie_big_nohaplotig	exon	135178534	135179116	99	-	.	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 1779 2361 +
Chr1	stalkie_big_nohaplotig	exon	135179179	135179286	100	-	.	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 1671 1778 +
Chr1	stalkie_big_nohaplotig	exon	135179353	135179510	100	-	.	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 1513 1670 +
Chr1	stalkie_big_nohaplotig	exon	135179566	135179758	100	-	.	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 1320 1512 +
Chr1	stalkie_big_nohaplotig	exon	135180849	135181001	99	-	.	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 1167 1319 +
Chr1	stalkie_big_nohaplotig	exon	135181068	135181191	100	-	.	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 1043 1166 +
Chr1	stalkie_big_nohaplotig	exon	135181251	135181718	98	-	.	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 575 1042 +
Chr1	stalkie_big_nohaplotig	exon	135181781	135181945	99	-	.	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 410 574 +
Chr1	stalkie_big_nohaplotig	exon	135182007	135182358	99	-	.	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 58 409 +
Chr1	stalkie_big_nohaplotig	exon	135182420	135182476	100	-	.	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 1 57 +
Chr1	stalkie_big_nohaplotig	CDS	135174372	135174791	.	-	0	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 5407 5826 +
Chr1	stalkie_big_nohaplotig	CDS	135174860	135175187	.	-	1	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 5079 5406 +
Chr1	stalkie_big_nohaplotig	CDS	135175249	135175503	.	-	1	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 4824 5078 +
Chr1	stalkie_big_nohaplotig	CDS	135175575	135176009	.	-	1	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 4389 4823 +
Chr1	stalkie_big_nohaplotig	CDS	135176122	135176656	.	-	2	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 3854 4388 +
Chr1	stalkie_big_nohaplotig	CDS	135176723	135176902	.	-	2	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 3674 3853 +
Chr1	stalkie_big_nohaplotig	CDS	135176963	135177847	.	-	2	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 2789 3673 +
Chr1	stalkie_big_nohaplotig	CDS	135177988	135178150	.	-	0	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 2626 2788 +
Chr1	stalkie_big_nohaplotig	CDS	135178215	135178478	.	-	0	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 2362 2625 +
Chr1	stalkie_big_nohaplotig	CDS	135178534	135179116	.	-	1	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 1779 2361 +
Chr1	stalkie_big_nohaplotig	CDS	135179179	135179286	.	-	1	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 1671 1778 +
Chr1	stalkie_big_nohaplotig	CDS	135179353	135179510	.	-	0	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 1513 1670 +
Chr1	stalkie_big_nohaplotig	CDS	135179566	135179758	.	-	1	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 1320 1512 +
Chr1	stalkie_big_nohaplotig	CDS	135180849	135181001	.	-	1	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 1167 1319 +
Chr1	stalkie_big_nohaplotig	CDS	135181068	135181191	.	-	2	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 1043 1166 +
Chr1	stalkie_big_nohaplotig	CDS	135181251	135181718	.	-	2	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 575 1042 +
Chr1	stalkie_big_nohaplotig	CDS	135181781	135181945	.	-	2	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 410 574 +
Chr1	stalkie_big_nohaplotig	CDS	135182007	135182358	.	-	0	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 58 409 +
Chr1	stalkie_big_nohaplotig	CDS	135182420	135182476	.	-	0	Parent=FBgn0004391.1.mrna1;Target=FBgn0004391.1 1 57 +
Chr1	gffcl	locus	135182981	135183964	.	+	.	ID=RLOC_00011468;geneIDs=FBgn0053502.1.path1;transcripts=FBgn0053502.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135182981	135183964	.	+	.	ID=FBgn0053502.1.mrna1;geneID=FBgn0053502.1.path1;Name=FBgn0053502.1;Dir=sensecoverage=100.0;identity=99.5;matches=857;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011468
Chr1	stalkie_big_nohaplotig	exon	135182981	135183078	100	+	.	Parent=FBgn0053502.1.mrna1;Target=FBgn0053502.1 1 98 +
Chr1	stalkie_big_nohaplotig	exon	135183142	135183371	99	+	.	Parent=FBgn0053502.1.mrna1;Target=FBgn0053502.1 99 328 +
Chr1	stalkie_big_nohaplotig	exon	135183432	135183964	99	+	.	Parent=FBgn0053502.1.mrna1;Target=FBgn0053502.1 329 861 +
Chr1	stalkie_big_nohaplotig	CDS	135182981	135183078	.	+	0	Parent=FBgn0053502.1.mrna1;Target=FBgn0053502.1 1 98 +
Chr1	stalkie_big_nohaplotig	CDS	135183142	135183371	.	+	1	Parent=FBgn0053502.1.mrna1;Target=FBgn0053502.1 99 328 +
Chr1	stalkie_big_nohaplotig	CDS	135183432	135183964	.	+	2	Parent=FBgn0053502.1.mrna1;Target=FBgn0053502.1 329 861 +
Chr1	gffcl	locus	135187489	135188583	.	+	.	ID=RLOC_00011469;geneIDs=FBgn0029979.path1;transcripts=FBgn0029979.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135187489	135188583	.	+	.	ID=FBgn0029979.mrna1;geneID=FBgn0029979.path1;Name=FBgn0029979;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1093;mismatches=2;indels=0;unknowns=0;Target=FBgn0029979 1095 1 .;locus=RLOC_00011469
Chr1	stalkie_big_nohaplotig	exon	135187489	135188583	99	+	.	Parent=FBgn0029979.mrna1
Chr1	stalkie_big_nohaplotig	CDS	135187489	135188583	.	+	0	Parent=FBgn0029979.mrna1
Chr1	gffcl	locus	135194323	135195103	.	-	.	ID=RLOC_00011470;geneIDs=comp148557_c0_seq1.path1;transcripts=comp148557_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135194323	135195103	.	-	.	ID=comp148557_c0_seq1.mrna1;geneID=comp148557_c0_seq1.path1;Name=comp148557_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=776;mismatches=1;indels=4;unknowns=0;Target=comp148557_c0_seq1 777 1 .;CDS_Target=comp148557_c0_seq1 84 43 .;locus=RLOC_00011470
Chr1	stalkie_big_nohaplotig	exon	135194323	135195103	99	-	.	Parent=comp148557_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	135195018	135195061	.	-	0	Parent=comp148557_c0_seq1.mrna1
Chr1	gffcl	locus	135195973	135196596	.	-	.	ID=RLOC_00011471;geneIDs=comp154310_c2_seq1.path1;transcripts=comp154310_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135195973	135196596	.	-	.	ID=comp154310_c2_seq1.mrna1;geneID=comp154310_c2_seq1.path1;Name=comp154310_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=624;mismatches=0;indels=2;unknowns=0;Target=comp154310_c2_seq1 626 1 .;CDS_Target=comp154310_c2_seq1 95 3 .;locus=RLOC_00011471
Chr1	stalkie_big_nohaplotig	exon	135195973	135196596	99	-	.	Parent=comp154310_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	135196503	135196594	.	-	0	Parent=comp154310_c2_seq1.mrna1
Chr1	gffcl	locus	135197104	135197454	.	+	.	ID=RLOC_00011472;geneIDs=comp135171_c0_seq1.path1;transcripts=comp135171_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135197104	135197454	.	+	.	ID=comp135171_c0_seq1.mrna1;geneID=comp135171_c0_seq1.path1;Name=comp135171_c0_seq1;Dir=indeterminatecoverage=93.6;identity=99.1;matches=348;mismatches=3;indels=0;unknowns=0;Target=comp135171_c0_seq1 370 20 .;CDS_Target=comp135171_c0_seq1 29 21 .;locus=RLOC_00011472
Chr1	stalkie_big_nohaplotig	exon	135197104	135197454	99	+	.	Parent=comp135171_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	135197105	135197113	.	+	0	Parent=comp135171_c0_seq1.mrna1
Chr1	gffcl	locus	135207824	135209621	.	-	.	ID=RLOC_00011474;geneIDs=ORF1107.path1,comp150958_c0_seq1.path1;transcripts=comp150958_c0_seq1.mrna1,ORF1107.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135207824	135209600	.	-	.	ID=comp150958_c0_seq1.mrna1;geneID=comp150958_c0_seq1.path1;Name=comp150958_c0_seq1;Dir=antisensecoverage=99.9;identity=98.9;matches=1507;mismatches=16;indels=0;unknowns=0;locus=RLOC_00011474
Chr1	stalkie_big_nohaplotig	exon	135207824	135208572	98	-	.	Parent=comp150958_c0_seq1.mrna1;Target=comp150958_c0_seq1 2 750 -
Chr1	stalkie_big_nohaplotig	exon	135208827	135209600	99	-	.	Parent=comp150958_c0_seq1.mrna1;Target=comp150958_c0_seq1 751 1524 -
Chr1	stalkie_big_nohaplotig	CDS	135207905	135208572	.	-	2	Parent=comp150958_c0_seq1.mrna1;Target=comp150958_c0_seq1 83 750 .
Chr1	stalkie_big_nohaplotig	CDS	135208827	135209082	.	-	0	Parent=comp150958_c0_seq1.mrna1;Target=comp150958_c0_seq1 751 1006 .
Chr1	stalkie_big_nohaplotig	mRNA	135207909	135209621	.	-	.	ID=ORF1107.mrna1;geneID=ORF1107.path1;Name=ORF1107;Dir=sensecoverage=99.8;identity=98.1;matches=1210;mismatches=12;indels=12;unknowns=0;locus=RLOC_00011474
Chr1	stalkie_big_nohaplotig	exon	135207909	135208572	97	-	.	Parent=ORF1107.mrna1;Target=ORF1107 566 1229 +
Chr1	stalkie_big_nohaplotig	exon	135208827	135209232	99	-	.	Parent=ORF1107.mrna1;Target=ORF1107 160 565 +
Chr1	stalkie_big_nohaplotig	exon	135209303	135209355	100	-	.	Parent=ORF1107.mrna1;Target=ORF1107 107 159 +
Chr1	stalkie_big_nohaplotig	exon	135209421	135209484	100	-	.	Parent=ORF1107.mrna1;Target=ORF1107 43 106 +
Chr1	stalkie_big_nohaplotig	exon	135209581	135209621	92	-	.	Parent=ORF1107.mrna1;Target=ORF1107 2 42 +
Chr1	stalkie_big_nohaplotig	CDS	135207911	135208572	.	-	2	Parent=ORF1107.mrna1;Target=ORF1107 566 1227 +
Chr1	stalkie_big_nohaplotig	CDS	135208827	135209232	.	-	0	Parent=ORF1107.mrna1;Target=ORF1107 160 565 +
Chr1	stalkie_big_nohaplotig	CDS	135209303	135209355	.	-	2	Parent=ORF1107.mrna1;Target=ORF1107 107 159 +
Chr1	stalkie_big_nohaplotig	CDS	135209421	135209484	.	-	0	Parent=ORF1107.mrna1;Target=ORF1107 43 106 +
Chr1	stalkie_big_nohaplotig	CDS	135209581	135209619	.	-	0	Parent=ORF1107.mrna1;Target=ORF1107 4 42 +
Chr1	gffcl	locus	135211777	135212459	.	+	.	ID=RLOC_00011475;geneIDs=FBgn0260858.1.path1;transcripts=FBgn0260858.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135211777	135212459	.	+	.	ID=FBgn0260858.1.mrna1;geneID=FBgn0260858.1.path1;Name=FBgn0260858.1;Dir=sensecoverage=100.0;identity=99.7;matches=625;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011475
Chr1	stalkie_big_nohaplotig	exon	135211777	135211931	99	+	.	Parent=FBgn0260858.1.mrna1;Target=FBgn0260858.1 1 155 +
Chr1	stalkie_big_nohaplotig	exon	135211988	135212459	99	+	.	Parent=FBgn0260858.1.mrna1;Target=FBgn0260858.1 156 627 +
Chr1	stalkie_big_nohaplotig	CDS	135211777	135211931	.	+	0	Parent=FBgn0260858.1.mrna1;Target=FBgn0260858.1 1 155 +
Chr1	stalkie_big_nohaplotig	CDS	135211988	135212459	.	+	1	Parent=FBgn0260858.1.mrna1;Target=FBgn0260858.1 156 627 +
Chr1	gffcl	locus	135213267	135213502	.	-	.	ID=RLOC_00011476;geneIDs=comp147569_c0_seq1.path1;transcripts=comp147569_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135213267	135213502	.	-	.	ID=comp147569_c0_seq1.mrna1;geneID=comp147569_c0_seq1.path1;Name=comp147569_c0_seq1;Dir=indeterminatecoverage=83.0;identity=95.8;matches=230;mismatches=6;indels=4;unknowns=0;Target=comp147569_c0_seq1 240 1 .;CDS_Target=comp147569_c0_seq1 105 1 .;locus=RLOC_00011476
Chr1	stalkie_big_nohaplotig	exon	135213267	135213502	95	-	.	Parent=comp147569_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	135213399	135213502	.	-	0	Parent=comp147569_c0_seq1.mrna1
Chr1	gffcl	locus	135215927	135219324	.	+	.	ID=RLOC_00011477;geneIDs=FBgn0029737.1.path1;transcripts=FBgn0029737.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135215927	135219324	.	+	.	ID=FBgn0029737.1.mrna1;geneID=FBgn0029737.1.path1;Name=FBgn0029737.1;Dir=sensecoverage=100.0;identity=98.4;matches=1801;mismatches=29;indels=1;unknowns=0;locus=RLOC_00011477
Chr1	stalkie_big_nohaplotig	exon	135215927	135216152	96	+	.	Parent=FBgn0029737.1.mrna1;Target=FBgn0029737.1 1 225 +
Chr1	stalkie_big_nohaplotig	exon	135216211	135216365	98	+	.	Parent=FBgn0029737.1.mrna1;Target=FBgn0029737.1 226 380 +
Chr1	stalkie_big_nohaplotig	exon	135216427	135216548	100	+	.	Parent=FBgn0029737.1.mrna1;Target=FBgn0029737.1 381 502 +
Chr1	stalkie_big_nohaplotig	exon	135217578	135217761	98	+	.	Parent=FBgn0029737.1.mrna1;Target=FBgn0029737.1 503 686 +
Chr1	stalkie_big_nohaplotig	exon	135217828	135218032	100	+	.	Parent=FBgn0029737.1.mrna1;Target=FBgn0029737.1 687 891 +
Chr1	stalkie_big_nohaplotig	exon	135218101	135218268	98	+	.	Parent=FBgn0029737.1.mrna1;Target=FBgn0029737.1 892 1059 +
Chr1	stalkie_big_nohaplotig	exon	135218366	135218487	98	+	.	Parent=FBgn0029737.1.mrna1;Target=FBgn0029737.1 1060 1181 +
Chr1	stalkie_big_nohaplotig	exon	135218561	135218730	98	+	.	Parent=FBgn0029737.1.mrna1;Target=FBgn0029737.1 1182 1351 +
Chr1	stalkie_big_nohaplotig	exon	135218786	135218972	97	+	.	Parent=FBgn0029737.1.mrna1;Target=FBgn0029737.1 1352 1538 +
Chr1	stalkie_big_nohaplotig	exon	135219033	135219324	97	+	.	Parent=FBgn0029737.1.mrna1;Target=FBgn0029737.1 1539 1830 +
Chr1	stalkie_big_nohaplotig	CDS	135216009	135216152	.	+	0	Parent=FBgn0029737.1.mrna1;Target=FBgn0029737.1 82 225 +
Chr1	stalkie_big_nohaplotig	CDS	135216211	135216365	.	+	0	Parent=FBgn0029737.1.mrna1;Target=FBgn0029737.1 226 380 +
Chr1	stalkie_big_nohaplotig	CDS	135216427	135216548	.	+	1	Parent=FBgn0029737.1.mrna1;Target=FBgn0029737.1 381 502 +
Chr1	stalkie_big_nohaplotig	CDS	135217578	135217761	.	+	2	Parent=FBgn0029737.1.mrna1;Target=FBgn0029737.1 503 686 +
Chr1	stalkie_big_nohaplotig	CDS	135217828	135218032	.	+	1	Parent=FBgn0029737.1.mrna1;Target=FBgn0029737.1 687 891 +
Chr1	stalkie_big_nohaplotig	CDS	135218101	135218268	.	+	0	Parent=FBgn0029737.1.mrna1;Target=FBgn0029737.1 892 1059 +
Chr1	stalkie_big_nohaplotig	CDS	135218366	135218487	.	+	0	Parent=FBgn0029737.1.mrna1;Target=FBgn0029737.1 1060 1181 +
Chr1	stalkie_big_nohaplotig	CDS	135218561	135218730	.	+	1	Parent=FBgn0029737.1.mrna1;Target=FBgn0029737.1 1182 1351 +
Chr1	stalkie_big_nohaplotig	CDS	135218786	135218972	.	+	2	Parent=FBgn0029737.1.mrna1;Target=FBgn0029737.1 1352 1538 +
Chr1	stalkie_big_nohaplotig	CDS	135219033	135219324	.	+	1	Parent=FBgn0029737.1.mrna1;Target=FBgn0029737.1 1539 1830 +
Chr1	gffcl	locus	135219443	135239251	.	-	.	ID=RLOC_00011478;geneIDs=comp154932_c6_seq1.path1;transcripts=comp154932_c6_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135219443	135239251	.	-	.	ID=comp154932_c6_seq1.mrna1;geneID=comp154932_c6_seq1.path1;Name=comp154932_c6_seq1;Dir=sensecoverage=98.1;identity=98.1;matches=2406;mismatches=28;indels=18;unknowns=0;Target=comp154932_c6_seq1 950 1114 +;locus=RLOC_00011478
Chr1	stalkie_big_nohaplotig	exon	135219443	135220235	98	-	.	Parent=comp154932_c6_seq1.mrna1;Target=comp154932_c6_seq1 1692 2482 +
Chr1	stalkie_big_nohaplotig	exon	135221688	135221909	100	-	.	Parent=comp154932_c6_seq1.mrna1;Target=comp154932_c6_seq1 1470 1691 +
Chr1	stalkie_big_nohaplotig	exon	135221975	135222302	100	-	.	Parent=comp154932_c6_seq1.mrna1;Target=comp154932_c6_seq1 1142 1469 +
Chr1	stalkie_big_nohaplotig	exon	135224540	135224747	97	-	.	Parent=comp154932_c6_seq1.mrna1;Target=comp154932_c6_seq1 933 1141 +
Chr1	stalkie_big_nohaplotig	exon	135238362	135239251	96	-	.	Parent=comp154932_c6_seq1.mrna1;Target=comp154932_c6_seq1 38 932 +
Chr1	stalkie_big_nohaplotig	CDS	135224567	135224730	.	-	0	Parent=comp154932_c6_seq1.mrna1
Chr1	gffcl	locus	135246436	135247403	.	+	.	ID=RLOC_00011479;geneIDs=FBgn0030745.1.path1;transcripts=FBgn0030745.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135246436	135247403	.	+	.	ID=FBgn0030745.1.mrna1;geneID=FBgn0030745.1.path1;Name=FBgn0030745.1;Dir=sensecoverage=100.0;identity=99.6;matches=837;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011479
Chr1	stalkie_big_nohaplotig	exon	135246436	135246725	99	+	.	Parent=FBgn0030745.1.mrna1;Target=FBgn0030745.1 1 290 +
Chr1	stalkie_big_nohaplotig	exon	135246796	135247068	100	+	.	Parent=FBgn0030745.1.mrna1;Target=FBgn0030745.1 291 563 +
Chr1	stalkie_big_nohaplotig	exon	135247127	135247403	99	+	.	Parent=FBgn0030745.1.mrna1;Target=FBgn0030745.1 564 840 +
Chr1	stalkie_big_nohaplotig	CDS	135246436	135246725	.	+	0	Parent=FBgn0030745.1.mrna1;Target=FBgn0030745.1 1 290 +
Chr1	stalkie_big_nohaplotig	CDS	135246796	135247068	.	+	1	Parent=FBgn0030745.1.mrna1;Target=FBgn0030745.1 291 563 +
Chr1	stalkie_big_nohaplotig	CDS	135247127	135247403	.	+	1	Parent=FBgn0030745.1.mrna1;Target=FBgn0030745.1 564 840 +
Chr1	gffcl	locus	135249586	135251555	.	+	.	ID=RLOC_00011480;geneIDs=FBgn0010416.1.path1;transcripts=FBgn0010416.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135249586	135251555	.	+	.	ID=FBgn0010416.1.mrna1;geneID=FBgn0010416.1.path1;Name=FBgn0010416.1;Dir=sensecoverage=100.0;identity=99.5;matches=1726;mismatches=8;indels=0;unknowns=0;locus=RLOC_00011480
Chr1	stalkie_big_nohaplotig	exon	135249586	135249654	100	+	.	Parent=FBgn0010416.1.mrna1;Target=FBgn0010416.1 1 69 +
Chr1	stalkie_big_nohaplotig	exon	135249713	135250419	99	+	.	Parent=FBgn0010416.1.mrna1;Target=FBgn0010416.1 70 776 +
Chr1	stalkie_big_nohaplotig	exon	135250481	135250927	99	+	.	Parent=FBgn0010416.1.mrna1;Target=FBgn0010416.1 777 1223 +
Chr1	stalkie_big_nohaplotig	exon	135250984	135251465	99	+	.	Parent=FBgn0010416.1.mrna1;Target=FBgn0010416.1 1224 1705 +
Chr1	stalkie_big_nohaplotig	exon	135251527	135251555	100	+	.	Parent=FBgn0010416.1.mrna1;Target=FBgn0010416.1 1706 1734 +
Chr1	stalkie_big_nohaplotig	CDS	135249586	135249654	.	+	0	Parent=FBgn0010416.1.mrna1;Target=FBgn0010416.1 1 69 +
Chr1	stalkie_big_nohaplotig	CDS	135249713	135250419	.	+	0	Parent=FBgn0010416.1.mrna1;Target=FBgn0010416.1 70 776 +
Chr1	stalkie_big_nohaplotig	CDS	135250481	135250927	.	+	1	Parent=FBgn0010416.1.mrna1;Target=FBgn0010416.1 777 1223 +
Chr1	stalkie_big_nohaplotig	CDS	135250984	135251465	.	+	1	Parent=FBgn0010416.1.mrna1;Target=FBgn0010416.1 1224 1705 +
Chr1	stalkie_big_nohaplotig	CDS	135251527	135251555	.	+	2	Parent=FBgn0010416.1.mrna1;Target=FBgn0010416.1 1706 1734 +
Chr1	gffcl	locus	135272721	135284660	.	+	.	ID=RLOC_00011481;geneIDs=FBgn0030747.1.path1;transcripts=FBgn0030747.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135272721	135284660	.	+	.	ID=FBgn0030747.1.mrna1;geneID=FBgn0030747.1.path1;Name=FBgn0030747.1;Dir=sensecoverage=100.0;identity=99.6;matches=3780;mismatches=14;indels=1;unknowns=0;Target=FBgn0030747.1 3 91 +;locus=RLOC_00011481
Chr1	stalkie_big_nohaplotig	exon	135272721	135272810	98	+	.	Parent=FBgn0030747.1.mrna1;Target=FBgn0030747.1 1 91 +
Chr1	stalkie_big_nohaplotig	exon	135279995	135280120	100	+	.	Parent=FBgn0030747.1.mrna1;Target=FBgn0030747.1 92 217 +
Chr1	stalkie_big_nohaplotig	exon	135280257	135280803	99	+	.	Parent=FBgn0030747.1.mrna1;Target=FBgn0030747.1 218 764 +
Chr1	stalkie_big_nohaplotig	exon	135280868	135281282	99	+	.	Parent=FBgn0030747.1.mrna1;Target=FBgn0030747.1 765 1179 +
Chr1	stalkie_big_nohaplotig	exon	135281557	135282166	100	+	.	Parent=FBgn0030747.1.mrna1;Target=FBgn0030747.1 1180 1789 +
Chr1	stalkie_big_nohaplotig	exon	135282371	135282515	100	+	.	Parent=FBgn0030747.1.mrna1;Target=FBgn0030747.1 1790 1934 +
Chr1	stalkie_big_nohaplotig	exon	135282579	135283081	99	+	.	Parent=FBgn0030747.1.mrna1;Target=FBgn0030747.1 1935 2437 +
Chr1	stalkie_big_nohaplotig	exon	135283142	135283955	99	+	.	Parent=FBgn0030747.1.mrna1;Target=FBgn0030747.1 2438 3251 +
Chr1	stalkie_big_nohaplotig	exon	135284040	135284366	100	+	.	Parent=FBgn0030747.1.mrna1;Target=FBgn0030747.1 3252 3578 +
Chr1	stalkie_big_nohaplotig	exon	135284444	135284660	99	+	.	Parent=FBgn0030747.1.mrna1;Target=FBgn0030747.1 3579 3795 +
Chr1	stalkie_big_nohaplotig	CDS	135272723	135272810	.	+	0	Parent=FBgn0030747.1.mrna1
Chr1	gffcl	locus	135286792	135301229	.	-	.	ID=RLOC_00011482;geneIDs=FBgn0035935.1.path1;transcripts=FBgn0035935.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135286792	135301229	.	-	.	ID=FBgn0035935.1.mrna1;geneID=FBgn0035935.1.path1;Name=FBgn0035935.1;Dir=sensecoverage=100.0;identity=98.9;matches=4986;mismatches=54;indels=0;unknowns=0;locus=RLOC_00011482
Chr1	stalkie_big_nohaplotig	exon	135286792	135286969	100	-	.	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 4863 5040 +
Chr1	stalkie_big_nohaplotig	exon	135287029	135287305	98	-	.	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 4586 4862 +
Chr1	stalkie_big_nohaplotig	exon	135287361	135287599	98	-	.	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 4347 4585 +
Chr1	stalkie_big_nohaplotig	exon	135287664	135287914	98	-	.	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 4096 4346 +
Chr1	stalkie_big_nohaplotig	exon	135287977	135288223	99	-	.	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 3849 4095 +
Chr1	stalkie_big_nohaplotig	exon	135288284	135289261	99	-	.	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 2871 3848 +
Chr1	stalkie_big_nohaplotig	exon	135289322	135290382	98	-	.	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 1810 2870 +
Chr1	stalkie_big_nohaplotig	exon	135290538	135290738	100	-	.	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 1609 1809 +
Chr1	stalkie_big_nohaplotig	exon	135290825	135290977	98	-	.	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 1456 1608 +
Chr1	stalkie_big_nohaplotig	exon	135291085	135291201	99	-	.	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 1339 1455 +
Chr1	stalkie_big_nohaplotig	exon	135291267	135291464	97	-	.	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 1141 1338 +
Chr1	stalkie_big_nohaplotig	exon	135291540	135292223	98	-	.	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 457 1140 +
Chr1	stalkie_big_nohaplotig	exon	135292782	135292877	100	-	.	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 361 456 +
Chr1	stalkie_big_nohaplotig	exon	135293222	135293408	99	-	.	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 174 360 +
Chr1	stalkie_big_nohaplotig	exon	135293475	135293631	99	-	.	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 17 173 +
Chr1	stalkie_big_nohaplotig	exon	135301214	135301229	100	-	.	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 1 16 +
Chr1	stalkie_big_nohaplotig	CDS	135286792	135286969	.	-	1	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 4863 5040 +
Chr1	stalkie_big_nohaplotig	CDS	135287029	135287305	.	-	2	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 4586 4862 +
Chr1	stalkie_big_nohaplotig	CDS	135287361	135287599	.	-	1	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 4347 4585 +
Chr1	stalkie_big_nohaplotig	CDS	135287664	135287914	.	-	0	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 4096 4346 +
Chr1	stalkie_big_nohaplotig	CDS	135287977	135288223	.	-	1	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 3849 4095 +
Chr1	stalkie_big_nohaplotig	CDS	135288284	135289261	.	-	1	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 2871 3848 +
Chr1	stalkie_big_nohaplotig	CDS	135289322	135290382	.	-	0	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 1810 2870 +
Chr1	stalkie_big_nohaplotig	CDS	135290538	135290738	.	-	0	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 1609 1809 +
Chr1	stalkie_big_nohaplotig	CDS	135290825	135290977	.	-	0	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 1456 1608 +
Chr1	stalkie_big_nohaplotig	CDS	135291085	135291201	.	-	0	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 1339 1455 +
Chr1	stalkie_big_nohaplotig	CDS	135291267	135291464	.	-	0	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 1141 1338 +
Chr1	stalkie_big_nohaplotig	CDS	135291540	135292223	.	-	0	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 457 1140 +
Chr1	stalkie_big_nohaplotig	CDS	135292782	135292877	.	-	0	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 361 456 +
Chr1	stalkie_big_nohaplotig	CDS	135293222	135293408	.	-	1	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 174 360 +
Chr1	stalkie_big_nohaplotig	CDS	135293475	135293631	.	-	2	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 17 173 +
Chr1	stalkie_big_nohaplotig	CDS	135301214	135301229	.	-	0	Parent=FBgn0035935.1.mrna1;Target=FBgn0035935.1 1 16 +
Chr1	gffcl	locus	135393162	135397777	.	+	.	ID=RLOC_00011483;geneIDs=FBgn0030748.1.path1;transcripts=FBgn0030748.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135393162	135397777	.	+	.	ID=FBgn0030748.1.mrna1;geneID=FBgn0030748.1.path1;Name=FBgn0030748.1;Dir=sensecoverage=100.0;identity=99.6;matches=1392;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011483
Chr1	stalkie_big_nohaplotig	exon	135393162	135393296	99	+	.	Parent=FBgn0030748.1.mrna1;Target=FBgn0030748.1 1 135 +
Chr1	stalkie_big_nohaplotig	exon	135395767	135396177	100	+	.	Parent=FBgn0030748.1.mrna1;Target=FBgn0030748.1 136 546 +
Chr1	stalkie_big_nohaplotig	exon	135396246	135396394	100	+	.	Parent=FBgn0030748.1.mrna1;Target=FBgn0030748.1 547 695 +
Chr1	stalkie_big_nohaplotig	exon	135396452	135396732	100	+	.	Parent=FBgn0030748.1.mrna1;Target=FBgn0030748.1 696 976 +
Chr1	stalkie_big_nohaplotig	exon	135397264	135397379	100	+	.	Parent=FBgn0030748.1.mrna1;Target=FBgn0030748.1 977 1092 +
Chr1	stalkie_big_nohaplotig	exon	135397472	135397777	98	+	.	Parent=FBgn0030748.1.mrna1;Target=FBgn0030748.1 1093 1398 +
Chr1	stalkie_big_nohaplotig	CDS	135393162	135393296	.	+	0	Parent=FBgn0030748.1.mrna1;Target=FBgn0030748.1 1 135 +
Chr1	stalkie_big_nohaplotig	CDS	135395767	135396177	.	+	0	Parent=FBgn0030748.1.mrna1;Target=FBgn0030748.1 136 546 +
Chr1	stalkie_big_nohaplotig	CDS	135396246	135396394	.	+	0	Parent=FBgn0030748.1.mrna1;Target=FBgn0030748.1 547 695 +
Chr1	stalkie_big_nohaplotig	CDS	135396452	135396732	.	+	1	Parent=FBgn0030748.1.mrna1;Target=FBgn0030748.1 696 976 +
Chr1	stalkie_big_nohaplotig	CDS	135397264	135397379	.	+	2	Parent=FBgn0030748.1.mrna1;Target=FBgn0030748.1 977 1092 +
Chr1	stalkie_big_nohaplotig	CDS	135397472	135397777	.	+	0	Parent=FBgn0030748.1.mrna1;Target=FBgn0030748.1 1093 1398 +
Chr1	gffcl	locus	135398646	135407165	.	-	.	ID=RLOC_00011484;geneIDs=FBgn0030749.1.path1;transcripts=FBgn0030749.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135398646	135407165	.	-	.	ID=FBgn0030749.1.mrna1;geneID=FBgn0030749.1.path1;Name=FBgn0030749.1;Dir=sensecoverage=100.0;identity=99.5;matches=991;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011484
Chr1	stalkie_big_nohaplotig	exon	135398646	135398708	100	-	.	Parent=FBgn0030749.1.mrna1;Target=FBgn0030749.1 934 996 +
Chr1	stalkie_big_nohaplotig	exon	135398773	135398841	98	-	.	Parent=FBgn0030749.1.mrna1;Target=FBgn0030749.1 865 933 +
Chr1	stalkie_big_nohaplotig	exon	135399816	135400025	100	-	.	Parent=FBgn0030749.1.mrna1;Target=FBgn0030749.1 655 864 +
Chr1	stalkie_big_nohaplotig	exon	135400091	135400320	98	-	.	Parent=FBgn0030749.1.mrna1;Target=FBgn0030749.1 425 654 +
Chr1	stalkie_big_nohaplotig	exon	135400526	135400766	100	-	.	Parent=FBgn0030749.1.mrna1;Target=FBgn0030749.1 184 424 +
Chr1	stalkie_big_nohaplotig	exon	135401385	135401525	100	-	.	Parent=FBgn0030749.1.mrna1;Target=FBgn0030749.1 43 183 +
Chr1	stalkie_big_nohaplotig	exon	135407124	135407165	97	-	.	Parent=FBgn0030749.1.mrna1;Target=FBgn0030749.1 1 42 +
Chr1	stalkie_big_nohaplotig	CDS	135398646	135398708	.	-	0	Parent=FBgn0030749.1.mrna1;Target=FBgn0030749.1 934 996 +
Chr1	stalkie_big_nohaplotig	CDS	135398773	135398841	.	-	0	Parent=FBgn0030749.1.mrna1;Target=FBgn0030749.1 865 933 +
Chr1	stalkie_big_nohaplotig	CDS	135399816	135400025	.	-	0	Parent=FBgn0030749.1.mrna1;Target=FBgn0030749.1 655 864 +
Chr1	stalkie_big_nohaplotig	CDS	135400091	135400320	.	-	2	Parent=FBgn0030749.1.mrna1;Target=FBgn0030749.1 425 654 +
Chr1	stalkie_big_nohaplotig	CDS	135400526	135400766	.	-	0	Parent=FBgn0030749.1.mrna1;Target=FBgn0030749.1 184 424 +
Chr1	stalkie_big_nohaplotig	CDS	135401385	135401525	.	-	0	Parent=FBgn0030749.1.mrna1;Target=FBgn0030749.1 43 183 +
Chr1	stalkie_big_nohaplotig	CDS	135407124	135407165	.	-	0	Parent=FBgn0030749.1.mrna1;Target=FBgn0030749.1 1 42 +
Chr1	gffcl	locus	135416076	135416799	.	+	.	ID=RLOC_00011485;geneIDs=comp154001_c0_seq1.path1;transcripts=comp154001_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135416076	135416799	.	+	.	ID=comp154001_c0_seq1.mrna1;geneID=comp154001_c0_seq1.path1;Name=comp154001_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=662;mismatches=5;indels=0;unknowns=0;Target=comp154001_c0_seq1 43 654 +;locus=RLOC_00011485
Chr1	stalkie_big_nohaplotig	exon	135416076	135416104	100	+	.	Parent=comp154001_c0_seq1.mrna1;Target=comp154001_c0_seq1 1 29 +
Chr1	stalkie_big_nohaplotig	exon	135416162	135416799	99	+	.	Parent=comp154001_c0_seq1.mrna1;Target=comp154001_c0_seq1 30 667 +
Chr1	stalkie_big_nohaplotig	CDS	135416175	135416786	.	+	0	Parent=comp154001_c0_seq1.mrna1
Chr1	gffcl	locus	135447376	137041346	.	+	.	ID=RLOC_00011487;geneIDs=comp145099_c0_seq1.path1;transcripts=comp145099_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135447376	137041346	.	+	.	ID=comp145099_c0_seq1.mrna1;geneID=comp145099_c0_seq1.path1;Name=comp145099_c0_seq1;Dir=indeterminatecoverage=73.2;identity=95.1;matches=507;mismatches=22;indels=4;unknowns=0;Target=comp145099_c0_seq1 134 111 .;locus=RLOC_00011487
Chr1	stalkie_big_nohaplotig	exon	135447376	135447844	96	+	.	Parent=comp145099_c0_seq1.mrna1;Target=comp145099_c0_seq1 471 1 .
Chr1	stalkie_big_nohaplotig	exon	137028710	137028711	100	+	.	Parent=comp145099_c0_seq1.mrna1;Target=comp145099_c0_seq1 473 472 .
Chr1	stalkie_big_nohaplotig	exon	137035373	137035382	100	+	.	Parent=comp145099_c0_seq1.mrna1;Target=comp145099_c0_seq1 483 474 .
Chr1	stalkie_big_nohaplotig	exon	137040174	137040176	100	+	.	Parent=comp145099_c0_seq1.mrna1;Target=comp145099_c0_seq1 486 484 .
Chr1	stalkie_big_nohaplotig	exon	137041301	137041346	76	+	.	Parent=comp145099_c0_seq1.mrna1;Target=comp145099_c0_seq1 532 487 .
Chr1	stalkie_big_nohaplotig	CDS	135447485	135447508	.	+	0	Parent=comp145099_c0_seq1.mrna1
Chr1	gffcl	locus	135451656	135488807	.	-	.	ID=RLOC_00011488;geneIDs=FBgn0030796.1.path1;transcripts=FBgn0030796.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135451656	135488807	.	-	.	ID=FBgn0030796.1.mrna1;geneID=FBgn0030796.1.path1;Name=FBgn0030796.1;Dir=sensecoverage=100.0;identity=99.4;matches=2353;mismatches=14;indels=0;unknowns=0;locus=RLOC_00011488
Chr1	stalkie_big_nohaplotig	exon	135451656	135451799	98	-	.	Parent=FBgn0030796.1.mrna1;Target=FBgn0030796.1 2224 2367 +
Chr1	stalkie_big_nohaplotig	exon	135451870	135452227	99	-	.	Parent=FBgn0030796.1.mrna1;Target=FBgn0030796.1 1866 2223 +
Chr1	stalkie_big_nohaplotig	exon	135452319	135452509	99	-	.	Parent=FBgn0030796.1.mrna1;Target=FBgn0030796.1 1675 1865 +
Chr1	stalkie_big_nohaplotig	exon	135452587	135453037	99	-	.	Parent=FBgn0030796.1.mrna1;Target=FBgn0030796.1 1224 1674 +
Chr1	stalkie_big_nohaplotig	exon	135453103	135453516	100	-	.	Parent=FBgn0030796.1.mrna1;Target=FBgn0030796.1 810 1223 +
Chr1	stalkie_big_nohaplotig	exon	135456297	135456777	98	-	.	Parent=FBgn0030796.1.mrna1;Target=FBgn0030796.1 329 809 +
Chr1	stalkie_big_nohaplotig	exon	135456931	135457034	100	-	.	Parent=FBgn0030796.1.mrna1;Target=FBgn0030796.1 225 328 +
Chr1	stalkie_big_nohaplotig	exon	135457153	135457302	100	-	.	Parent=FBgn0030796.1.mrna1;Target=FBgn0030796.1 75 224 +
Chr1	stalkie_big_nohaplotig	exon	135488734	135488807	100	-	.	Parent=FBgn0030796.1.mrna1;Target=FBgn0030796.1 1 74 +
Chr1	stalkie_big_nohaplotig	CDS	135451656	135451799	.	-	0	Parent=FBgn0030796.1.mrna1;Target=FBgn0030796.1 2224 2367 +
Chr1	stalkie_big_nohaplotig	CDS	135451870	135452227	.	-	1	Parent=FBgn0030796.1.mrna1;Target=FBgn0030796.1 1866 2223 +
Chr1	stalkie_big_nohaplotig	CDS	135452319	135452509	.	-	0	Parent=FBgn0030796.1.mrna1;Target=FBgn0030796.1 1675 1865 +
Chr1	stalkie_big_nohaplotig	CDS	135452587	135453037	.	-	1	Parent=FBgn0030796.1.mrna1;Target=FBgn0030796.1 1224 1674 +
Chr1	stalkie_big_nohaplotig	CDS	135453103	135453516	.	-	1	Parent=FBgn0030796.1.mrna1;Target=FBgn0030796.1 810 1223 +
Chr1	stalkie_big_nohaplotig	CDS	135456297	135456777	.	-	2	Parent=FBgn0030796.1.mrna1;Target=FBgn0030796.1 329 809 +
Chr1	stalkie_big_nohaplotig	CDS	135456931	135457034	.	-	1	Parent=FBgn0030796.1.mrna1;Target=FBgn0030796.1 225 328 +
Chr1	stalkie_big_nohaplotig	CDS	135457153	135457302	.	-	1	Parent=FBgn0030796.1.mrna1;Target=FBgn0030796.1 75 224 +
Chr1	stalkie_big_nohaplotig	CDS	135488734	135488807	.	-	0	Parent=FBgn0030796.1.mrna1;Target=FBgn0030796.1 1 74 +
Chr1	gffcl	locus	135517763	135567952	.	-	.	ID=RLOC_00011490;geneIDs=FBgn0030794.1.path1,comp153645_c0_seq1.path1;transcripts=comp153645_c0_seq1.mrna1,FBgn0030794.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135517763	135567952	.	-	.	ID=comp153645_c0_seq1.mrna1;geneID=comp153645_c0_seq1.path1;Name=comp153645_c0_seq1;Dir=indeterminatecoverage=88.3;identity=94.7;matches=451;mismatches=12;indels=13;unknowns=0;Target=comp153645_c0_seq1 294 241 .;locus=RLOC_00011490
Chr1	stalkie_big_nohaplotig	exon	135517763	135517768	83	-	.	Parent=comp153645_c0_seq1.mrna1;Target=comp153645_c0_seq1 476 471 .
Chr1	stalkie_big_nohaplotig	exon	135522467	135522468	100	-	.	Parent=comp153645_c0_seq1.mrna1;Target=comp153645_c0_seq1 470 469 .
Chr1	stalkie_big_nohaplotig	exon	135543498	135543501	100	-	.	Parent=comp153645_c0_seq1.mrna1;Target=comp153645_c0_seq1 468 465 .
Chr1	stalkie_big_nohaplotig	exon	135567502	135567952	94	-	.	Parent=comp153645_c0_seq1.mrna1;Target=comp153645_c0_seq1 464 1 .
Chr1	stalkie_big_nohaplotig	CDS	135567666	135567712	.	-	0	Parent=comp153645_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135520848	135523067	.	-	.	ID=FBgn0030794.1.mrna1;geneID=FBgn0030794.1.path1;Name=FBgn0030794.1;Dir=sensecoverage=99.9;identity=98.9;matches=2084;mismatches=23;indels=0;unknowns=0;locus=RLOC_00011490
Chr1	stalkie_big_nohaplotig	exon	135520848	135522195	98	-	.	Parent=FBgn0030794.1.mrna1;Target=FBgn0030794.1 762 2109 +
Chr1	stalkie_big_nohaplotig	exon	135522254	135522837	99	-	.	Parent=FBgn0030794.1.mrna1;Target=FBgn0030794.1 178 761 +
Chr1	stalkie_big_nohaplotig	exon	135522893	135523067	96	-	.	Parent=FBgn0030794.1.mrna1;Target=FBgn0030794.1 3 177 +
Chr1	stalkie_big_nohaplotig	CDS	135520848	135522195	.	-	1	Parent=FBgn0030794.1.mrna1;Target=FBgn0030794.1 762 2109 +
Chr1	stalkie_big_nohaplotig	CDS	135522254	135522837	.	-	0	Parent=FBgn0030794.1.mrna1;Target=FBgn0030794.1 178 761 +
Chr1	stalkie_big_nohaplotig	CDS	135522893	135523066	.	-	0	Parent=FBgn0030794.1.mrna1;Target=FBgn0030794.1 4 177 +
Chr1	gffcl	locus	135525919	135526529	.	+	.	ID=RLOC_00011491;geneIDs=comp150985_c0_seq1.path1;transcripts=comp150985_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135525919	135526529	.	+	.	ID=comp150985_c0_seq1.mrna1;geneID=comp150985_c0_seq1.path1;Name=comp150985_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=611;mismatches=0;indels=0;unknowns=0;Target=comp150985_c0_seq1 611 1 .;CDS_Target=comp150985_c0_seq1 350 162 .;locus=RLOC_00011491
Chr1	stalkie_big_nohaplotig	exon	135525919	135526529	100	+	.	Parent=comp150985_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	135526080	135526268	.	+	0	Parent=comp150985_c0_seq1.mrna1
Chr1	gffcl	locus	135536444	135536680	.	+	.	ID=RLOC_00011492;geneIDs=comp125798_c0_seq1.path1;transcripts=comp125798_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135536444	135536680	.	+	.	ID=comp125798_c0_seq1.mrna1;geneID=comp125798_c0_seq1.path1;Name=comp125798_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=237;mismatches=0;indels=3;unknowns=0;Target=comp125798_c0_seq1 240 1 .;CDS_Target=comp125798_c0_seq1 40 2 .;locus=RLOC_00011492
Chr1	stalkie_big_nohaplotig	exon	135536444	135536680	98	+	.	Parent=comp125798_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	135536445	135536481	.	+	0	Parent=comp125798_c0_seq1.mrna1
Chr1	gffcl	locus	135554710	135556109	.	-	.	ID=RLOC_00011493;geneIDs=comp160628_c1_seq1.path1;transcripts=comp160628_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135554710	135556109	.	-	.	ID=comp160628_c1_seq1.mrna1;geneID=comp160628_c1_seq1.path1;Name=comp160628_c1_seq1;Dir=sensecoverage=99.5;identity=95.5;matches=1180;mismatches=11;indels=44;unknowns=0;locus=RLOC_00011493
Chr1	stalkie_big_nohaplotig	exon	135554710	135555271	91	-	.	Parent=comp160628_c1_seq1.mrna1;Target=comp160628_c1_seq1 636 1241 +
Chr1	stalkie_big_nohaplotig	exon	135555347	135555634	99	-	.	Parent=comp160628_c1_seq1.mrna1;Target=comp160628_c1_seq1 348 635 +
Chr1	stalkie_big_nohaplotig	exon	135555719	135555827	100	-	.	Parent=comp160628_c1_seq1.mrna1;Target=comp160628_c1_seq1 239 347 +
Chr1	stalkie_big_nohaplotig	exon	135555878	135556109	97	-	.	Parent=comp160628_c1_seq1.mrna1;Target=comp160628_c1_seq1 7 238 +
Chr1	stalkie_big_nohaplotig	CDS	135555002	135555271	.	-	0	Parent=comp160628_c1_seq1.mrna1;Target=comp160628_c1_seq1 636 905 +
Chr1	stalkie_big_nohaplotig	CDS	135555347	135555526	.	-	0	Parent=comp160628_c1_seq1.mrna1;Target=comp160628_c1_seq1 456 635 +
Chr1	gffcl	locus	135583739	135584216	.	+	.	ID=RLOC_00011494;geneIDs=comp119332_c0_seq1.path1;transcripts=comp119332_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135583739	135584216	.	+	.	ID=comp119332_c0_seq1.mrna1;geneID=comp119332_c0_seq1.path1;Name=comp119332_c0_seq1;Dir=indeterminatecoverage=95.2;identity=100.0;matches=478;mismatches=0;indels=0;unknowns=0;Target=comp119332_c0_seq1 478 1 .;CDS_Target=comp119332_c0_seq1 371 252 .;locus=RLOC_00011494
Chr1	stalkie_big_nohaplotig	exon	135583739	135584216	100	+	.	Parent=comp119332_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	135583990	135584109	.	+	0	Parent=comp119332_c0_seq1.mrna1
Chr1	gffcl	locus	135588960	135602425	.	-	.	ID=RLOC_00011495;geneIDs=comp160659_c0_seq1.path1;transcripts=comp160659_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135588960	135602425	.	-	.	ID=comp160659_c0_seq1.mrna1;geneID=comp160659_c0_seq1.path1;Name=comp160659_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=1333;mismatches=1;indels=0;unknowns=0;Target=comp160659_c0_seq1 2 142 +;locus=RLOC_00011495
Chr1	stalkie_big_nohaplotig	exon	135588960	135589727	99	-	.	Parent=comp160659_c0_seq1.mrna1;Target=comp160659_c0_seq1 567 1334 +
Chr1	stalkie_big_nohaplotig	exon	135601860	135602425	100	-	.	Parent=comp160659_c0_seq1.mrna1;Target=comp160659_c0_seq1 1 566 +
Chr1	stalkie_big_nohaplotig	CDS	135602284	135602424	.	-	0	Parent=comp160659_c0_seq1.mrna1
Chr1	gffcl	locus	135617404	135671575	.	+	.	ID=RLOC_00011496;geneIDs=FBgn0052791.1.path1;transcripts=FBgn0052791.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135617404	135671575	.	+	.	ID=FBgn0052791.1.mrna1;geneID=FBgn0052791.1.path1;Name=FBgn0052791.1;Dir=sensecoverage=100.0;identity=99.7;matches=1559;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011496
Chr1	stalkie_big_nohaplotig	exon	135617404	135617515	99	+	.	Parent=FBgn0052791.1.mrna1;Target=FBgn0052791.1 1 112 +
Chr1	stalkie_big_nohaplotig	exon	135637834	135637943	100	+	.	Parent=FBgn0052791.1.mrna1;Target=FBgn0052791.1 113 222 +
Chr1	stalkie_big_nohaplotig	exon	135638298	135638483	100	+	.	Parent=FBgn0052791.1.mrna1;Target=FBgn0052791.1 223 408 +
Chr1	stalkie_big_nohaplotig	exon	135643579	135643679	100	+	.	Parent=FBgn0052791.1.mrna1;Target=FBgn0052791.1 409 509 +
Chr1	stalkie_big_nohaplotig	exon	135647995	135648086	100	+	.	Parent=FBgn0052791.1.mrna1;Target=FBgn0052791.1 510 601 +
Chr1	stalkie_big_nohaplotig	exon	135648215	135648343	100	+	.	Parent=FBgn0052791.1.mrna1;Target=FBgn0052791.1 602 730 +
Chr1	stalkie_big_nohaplotig	exon	135665602	135665721	100	+	.	Parent=FBgn0052791.1.mrna1;Target=FBgn0052791.1 731 850 +
Chr1	stalkie_big_nohaplotig	exon	135670597	135670767	99	+	.	Parent=FBgn0052791.1.mrna1;Target=FBgn0052791.1 851 1021 +
Chr1	stalkie_big_nohaplotig	exon	135671034	135671575	99	+	.	Parent=FBgn0052791.1.mrna1;Target=FBgn0052791.1 1022 1563 +
Chr1	stalkie_big_nohaplotig	CDS	135617404	135617515	.	+	0	Parent=FBgn0052791.1.mrna1;Target=FBgn0052791.1 1 112 +
Chr1	stalkie_big_nohaplotig	CDS	135637834	135637943	.	+	2	Parent=FBgn0052791.1.mrna1;Target=FBgn0052791.1 113 222 +
Chr1	stalkie_big_nohaplotig	CDS	135638298	135638483	.	+	0	Parent=FBgn0052791.1.mrna1;Target=FBgn0052791.1 223 408 +
Chr1	stalkie_big_nohaplotig	CDS	135643579	135643679	.	+	0	Parent=FBgn0052791.1.mrna1;Target=FBgn0052791.1 409 509 +
Chr1	stalkie_big_nohaplotig	CDS	135647995	135648086	.	+	1	Parent=FBgn0052791.1.mrna1;Target=FBgn0052791.1 510 601 +
Chr1	stalkie_big_nohaplotig	CDS	135648215	135648343	.	+	2	Parent=FBgn0052791.1.mrna1;Target=FBgn0052791.1 602 730 +
Chr1	stalkie_big_nohaplotig	CDS	135665602	135665721	.	+	2	Parent=FBgn0052791.1.mrna1;Target=FBgn0052791.1 731 850 +
Chr1	stalkie_big_nohaplotig	CDS	135670597	135670767	.	+	2	Parent=FBgn0052791.1.mrna1;Target=FBgn0052791.1 851 1021 +
Chr1	stalkie_big_nohaplotig	CDS	135671034	135671575	.	+	2	Parent=FBgn0052791.1.mrna1;Target=FBgn0052791.1 1022 1563 +
Chr1	gffcl	locus	135683404	136867800	.	+	.	ID=RLOC_00011497;geneIDs=comp143054_c0_seq1.path1;transcripts=comp143054_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135683404	136867800	.	+	.	ID=comp143054_c0_seq1.mrna1;geneID=comp143054_c0_seq1.path1;Name=comp143054_c0_seq1;Dir=indeterminatecoverage=87.1;identity=92.8;matches=311;mismatches=13;indels=11;unknowns=0;locus=RLOC_00011497
Chr1	stalkie_big_nohaplotig	exon	135683404	135683645	97	+	.	Parent=comp143054_c0_seq1.mrna1;Target=comp143054_c0_seq1 242 1 .
Chr1	stalkie_big_nohaplotig	exon	136809108	136809113	100	+	.	Parent=comp143054_c0_seq1.mrna1;Target=comp143054_c0_seq1 248 243 .
Chr1	stalkie_big_nohaplotig	exon	136809214	136809218	100	+	.	Parent=comp143054_c0_seq1.mrna1;Target=comp143054_c0_seq1 253 249 .
Chr1	stalkie_big_nohaplotig	exon	136810523	136810527	100	+	.	Parent=comp143054_c0_seq1.mrna1;Target=comp143054_c0_seq1 258 254 .
Chr1	stalkie_big_nohaplotig	exon	136815207	136815214	100	+	.	Parent=comp143054_c0_seq1.mrna1;Target=comp143054_c0_seq1 266 259 .
Chr1	stalkie_big_nohaplotig	exon	136820128	136820147	85	+	.	Parent=comp143054_c0_seq1.mrna1;Target=comp143054_c0_seq1 286 267 .
Chr1	stalkie_big_nohaplotig	exon	136839674	136839696	62	+	.	Parent=comp143054_c0_seq1.mrna1;Target=comp143054_c0_seq1 315 287 .
Chr1	stalkie_big_nohaplotig	exon	136867782	136867800	73	+	.	Parent=comp143054_c0_seq1.mrna1;Target=comp143054_c0_seq1 330 317 .
Chr1	stalkie_big_nohaplotig	CDS	135683642	135683645	.	+	0	Parent=comp143054_c0_seq1.mrna1;Target=comp143054_c0_seq1 242 239 .
Chr1	stalkie_big_nohaplotig	CDS	136809108	136809113	.	+	2	Parent=comp143054_c0_seq1.mrna1;Target=comp143054_c0_seq1 248 243 .
Chr1	stalkie_big_nohaplotig	CDS	136809214	136809218	.	+	2	Parent=comp143054_c0_seq1.mrna1;Target=comp143054_c0_seq1 253 249 .
Chr1	stalkie_big_nohaplotig	CDS	136810523	136810527	.	+	0	Parent=comp143054_c0_seq1.mrna1;Target=comp143054_c0_seq1 258 254 .
Chr1	stalkie_big_nohaplotig	CDS	136815207	136815214	.	+	1	Parent=comp143054_c0_seq1.mrna1;Target=comp143054_c0_seq1 266 259 .
Chr1	stalkie_big_nohaplotig	CDS	136820128	136820147	.	+	2	Parent=comp143054_c0_seq1.mrna1;Target=comp143054_c0_seq1 286 267 .
Chr1	stalkie_big_nohaplotig	CDS	136839674	136839696	.	+	0	Parent=comp143054_c0_seq1.mrna1;Target=comp143054_c0_seq1 315 287 .
Chr1	stalkie_big_nohaplotig	CDS	136867782	136867798	.	+	1	Parent=comp143054_c0_seq1.mrna1;Target=comp143054_c0_seq1 328 317 .
Chr1	gffcl	locus	135692726	135703520	.	+	.	ID=RLOC_00011498;geneIDs=FBgn0029667.1.path1;transcripts=FBgn0029667.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135692726	135703520	.	+	.	ID=FBgn0029667.1.mrna1;geneID=FBgn0029667.1.path1;Name=FBgn0029667.1;Dir=sensecoverage=100.0;identity=99.8;matches=1482;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011498
Chr1	stalkie_big_nohaplotig	exon	135692726	135692776	98	+	.	Parent=FBgn0029667.1.mrna1;Target=FBgn0029667.1 1 51 +
Chr1	stalkie_big_nohaplotig	exon	135695369	135695417	100	+	.	Parent=FBgn0029667.1.mrna1;Target=FBgn0029667.1 52 100 +
Chr1	stalkie_big_nohaplotig	exon	135700342	135700506	100	+	.	Parent=FBgn0029667.1.mrna1;Target=FBgn0029667.1 101 265 +
Chr1	stalkie_big_nohaplotig	exon	135700587	135700890	100	+	.	Parent=FBgn0029667.1.mrna1;Target=FBgn0029667.1 266 569 +
Chr1	stalkie_big_nohaplotig	exon	135702605	135703520	99	+	.	Parent=FBgn0029667.1.mrna1;Target=FBgn0029667.1 570 1485 +
Chr1	stalkie_big_nohaplotig	CDS	135692726	135692776	.	+	0	Parent=FBgn0029667.1.mrna1;Target=FBgn0029667.1 1 51 +
Chr1	stalkie_big_nohaplotig	CDS	135695369	135695417	.	+	0	Parent=FBgn0029667.1.mrna1;Target=FBgn0029667.1 52 100 +
Chr1	stalkie_big_nohaplotig	CDS	135700342	135700506	.	+	2	Parent=FBgn0029667.1.mrna1;Target=FBgn0029667.1 101 265 +
Chr1	stalkie_big_nohaplotig	CDS	135700587	135700890	.	+	2	Parent=FBgn0029667.1.mrna1;Target=FBgn0029667.1 266 569 +
Chr1	stalkie_big_nohaplotig	CDS	135702605	135703520	.	+	1	Parent=FBgn0029667.1.mrna1;Target=FBgn0029667.1 570 1485 +
Chr1	gffcl	locus	135706638	135708781	.	+	.	ID=RLOC_00011499;geneIDs=ORF842.path1;transcripts=ORF842.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135706638	135708781	.	+	.	ID=ORF842.mrna1;geneID=ORF842.path1;Name=ORF842;Dir=sensecoverage=100.0;identity=98.1;matches=1372;mismatches=26;indels=0;unknowns=0;locus=RLOC_00011499
Chr1	stalkie_big_nohaplotig	exon	135706638	135706851	97	+	.	Parent=ORF842.mrna1;Target=ORF842 1 214 +
Chr1	stalkie_big_nohaplotig	exon	135706912	135707667	97	+	.	Parent=ORF842.mrna1;Target=ORF842 215 970 +
Chr1	stalkie_big_nohaplotig	exon	135708354	135708781	99	+	.	Parent=ORF842.mrna1;Target=ORF842 971 1398 +
Chr1	stalkie_big_nohaplotig	CDS	135706638	135706851	.	+	0	Parent=ORF842.mrna1;Target=ORF842 1 214 +
Chr1	stalkie_big_nohaplotig	CDS	135706912	135707667	.	+	2	Parent=ORF842.mrna1;Target=ORF842 215 970 +
Chr1	stalkie_big_nohaplotig	CDS	135708354	135708781	.	+	2	Parent=ORF842.mrna1;Target=ORF842 971 1398 +
Chr1	gffcl	locus	135710759	135712041	.	+	.	ID=RLOC_00011500;geneIDs=ORF2858.path1;transcripts=ORF2858.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135710759	135712041	.	+	.	ID=ORF2858.mrna1;geneID=ORF2858.path1;Name=ORF2858;Dir=sensecoverage=100.0;identity=99.7;matches=793;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011500
Chr1	stalkie_big_nohaplotig	exon	135710759	135711218	99	+	.	Parent=ORF2858.mrna1;Target=ORF2858 1 460 +
Chr1	stalkie_big_nohaplotig	exon	135711707	135712041	99	+	.	Parent=ORF2858.mrna1;Target=ORF2858 461 795 +
Chr1	stalkie_big_nohaplotig	CDS	135710759	135711218	.	+	0	Parent=ORF2858.mrna1;Target=ORF2858 1 460 +
Chr1	stalkie_big_nohaplotig	CDS	135711707	135712041	.	+	2	Parent=ORF2858.mrna1;Target=ORF2858 461 795 +
Chr1	gffcl	locus	135726563	135728819	.	+	.	ID=RLOC_00011502;geneIDs=comp162028_c0_seq1.path1;transcripts=comp162028_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135726563	135728819	.	+	.	ID=comp162028_c0_seq1.mrna1;geneID=comp162028_c0_seq1.path1;Name=comp162028_c0_seq1;Dir=indeterminatecoverage=98.0;identity=95.5;matches=1978;mismatches=33;indels=60;unknowns=0;Target=comp162028_c0_seq1 1189 1058 .;locus=RLOC_00011502
Chr1	stalkie_big_nohaplotig	exon	135726563	135727822	93	+	.	Parent=comp162028_c0_seq1.mrna1;Target=comp162028_c0_seq1 1356 44 .
Chr1	stalkie_big_nohaplotig	exon	135728004	135728360	100	+	.	Parent=comp162028_c0_seq1.mrna1;Target=comp162028_c0_seq1 1713 1357 .
Chr1	stalkie_big_nohaplotig	exon	135728423	135728819	97	+	.	Parent=comp162028_c0_seq1.mrna1;Target=comp162028_c0_seq1 2111 1714 .
Chr1	stalkie_big_nohaplotig	CDS	135727524	135727655	.	+	0	Parent=comp162028_c0_seq1.mrna1
Chr1	gffcl	locus	135733699	135734205	.	-	.	ID=RLOC_00011503;geneIDs=comp84958_c0_seq1.path1;transcripts=comp84958_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135733699	135734205	.	-	.	ID=comp84958_c0_seq1.mrna1;geneID=comp84958_c0_seq1.path1;Name=comp84958_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.6;matches=505;mismatches=2;indels=0;unknowns=0;Target=comp84958_c0_seq1 507 1 .;CDS_Target=comp84958_c0_seq1 124 59 .;locus=RLOC_00011503
Chr1	stalkie_big_nohaplotig	exon	135733699	135734205	99	-	.	Parent=comp84958_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	135734082	135734147	.	-	0	Parent=comp84958_c0_seq1.mrna1
Chr1	gffcl	locus	135735023	135735433	.	+	.	ID=RLOC_00011504;geneIDs=comp147424_c0_seq1.path1;transcripts=comp147424_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135735023	135735433	.	+	.	ID=comp147424_c0_seq1.mrna1;geneID=comp147424_c0_seq1.path1;Name=comp147424_c0_seq1;Dir=indeterminatecoverage=98.3;identity=98.8;matches=406;mismatches=5;indels=0;unknowns=0;Target=comp147424_c0_seq1 411 1 .;CDS_Target=comp147424_c0_seq1 376 290 .;locus=RLOC_00011504
Chr1	stalkie_big_nohaplotig	exon	135735023	135735433	98	+	.	Parent=comp147424_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	135735312	135735398	.	+	0	Parent=comp147424_c0_seq1.mrna1
Chr1	gffcl	locus	135735545	135737183	.	+	.	ID=RLOC_00011505;geneIDs=comp148876_c0_seq1.path1,comp158687_c0_seq1.path1;transcripts=comp158687_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135735947	135737183	.	+	.	ID=comp158687_c0_seq1.mrna1;geneID=comp158687_c0_seq1.path1;Name=comp158687_c0_seq1;Dir=indeterminatecoverage=96.8;identity=92.7;matches=1151;mismatches=33;indels=57;unknowns=0;Target=comp158687_c0_seq1 1200 13 .;CDS_Target=comp158687_c0_seq1 84 13 .;locus=RLOC_00011505
Chr1	stalkie_big_nohaplotig	exon	135735947	135737183	92	+	.	Parent=comp158687_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	135735947	135736018	.	+	0	Parent=comp158687_c0_seq1.mrna1
Chr1	gffcl	locus	135740280	135740777	.	-	.	ID=RLOC_00011506;geneIDs=comp152206_c0_seq1.path1;transcripts=comp152206_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135740280	135740777	.	-	.	ID=comp152206_c0_seq1.mrna1;geneID=comp152206_c0_seq1.path1;Name=comp152206_c0_seq1;Dir=indeterminatecoverage=74.3;identity=92.1;matches=466;mismatches=32;indels=8;unknowns=0;Target=comp152206_c0_seq1 506 1 .;CDS_Target=comp152206_c0_seq1 367 320 .;locus=RLOC_00011506
Chr1	stalkie_big_nohaplotig	exon	135740280	135740777	92	-	.	Parent=comp152206_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	135740412	135740459	.	-	0	Parent=comp152206_c0_seq1.mrna1
Chr1	gffcl	locus	135744572	135749096	.	-	.	ID=RLOC_00011507;geneIDs=FBgn0263220.1.path2;transcripts=FBgn0263220.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	135744572	135749096	.	-	.	ID=FBgn0263220.1.mrna2;geneID=FBgn0263220.1.path2;Name=FBgn0263220.1;Dir=sensecoverage=75.0;identity=99.5;matches=1177;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011507
Chr1	stalkie_big_nohaplotig	exon	135744572	135744670	100	-	.	Parent=FBgn0263220.1.mrna2;Target=FBgn0263220.1 1480 1578 +
Chr1	stalkie_big_nohaplotig	exon	135745705	135745923	100	-	.	Parent=FBgn0263220.1.mrna2;Target=FBgn0263220.1 1261 1479 +
Chr1	stalkie_big_nohaplotig	exon	135745991	135746337	99	-	.	Parent=FBgn0263220.1.mrna2;Target=FBgn0263220.1 914 1260 +
Chr1	stalkie_big_nohaplotig	exon	135746442	135746569	100	-	.	Parent=FBgn0263220.1.mrna2;Target=FBgn0263220.1 786 913 +
Chr1	stalkie_big_nohaplotig	exon	135747770	135748088	98	-	.	Parent=FBgn0263220.1.mrna2;Target=FBgn0263220.1 467 785 +
Chr1	stalkie_big_nohaplotig	exon	135749026	135749096	100	-	.	Parent=FBgn0263220.1.mrna2;Target=FBgn0263220.1 396 466 +
Chr1	stalkie_big_nohaplotig	CDS	135744572	135744670	.	-	1	Parent=FBgn0263220.1.mrna2;Target=FBgn0263220.1 1480 1578 +
Chr1	stalkie_big_nohaplotig	CDS	135745705	135745923	.	-	1	Parent=FBgn0263220.1.mrna2;Target=FBgn0263220.1 1261 1479 +
Chr1	stalkie_big_nohaplotig	CDS	135745991	135746337	.	-	0	Parent=FBgn0263220.1.mrna2;Target=FBgn0263220.1 914 1260 +
Chr1	stalkie_big_nohaplotig	CDS	135746442	135746569	.	-	2	Parent=FBgn0263220.1.mrna2;Target=FBgn0263220.1 786 913 +
Chr1	stalkie_big_nohaplotig	CDS	135747770	135748088	.	-	0	Parent=FBgn0263220.1.mrna2;Target=FBgn0263220.1 467 785 +
Chr1	stalkie_big_nohaplotig	CDS	135749026	135749096	.	-	2	Parent=FBgn0263220.1.mrna2;Target=FBgn0263220.1 396 466 +
Chr1	gffcl	locus	135780001	135780258	.	+	.	ID=RLOC_00011508;geneIDs=comp66416_c0_seq1.path2;transcripts=comp66416_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	135780001	135780258	.	+	.	ID=comp66416_c0_seq1.mrna2;geneID=comp66416_c0_seq1.path2;Name=comp66416_c0_seq1;Dir=indeterminatecoverage=100.0;identity=81.8;matches=211;mismatches=47;indels=0;unknowns=0;Target=comp66416_c0_seq1 258 1 .;locus=RLOC_00011508
Chr1	stalkie_big_nohaplotig	exon	135780001	135780258	81	+	.	Parent=comp66416_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	135780001	135780258	.	+	0	Parent=comp66416_c0_seq1.mrna2
Chr1	gffcl	locus	135781444	135782148	.	-	.	ID=RLOC_00011509;geneIDs=comp143201_c0_seq1.path1;transcripts=comp143201_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135781444	135782148	.	-	.	ID=comp143201_c0_seq1.mrna1;geneID=comp143201_c0_seq1.path1;Name=comp143201_c0_seq1;Dir=sensecoverage=99.7;identity=99.1;matches=637;mismatches=6;indels=0;unknowns=0;Target=comp143201_c0_seq1 101 304 +;locus=RLOC_00011509
Chr1	stalkie_big_nohaplotig	exon	135781444	135781605	99	-	.	Parent=comp143201_c0_seq1.mrna1;Target=comp143201_c0_seq1 482 643 +
Chr1	stalkie_big_nohaplotig	exon	135781668	135782148	98	-	.	Parent=comp143201_c0_seq1.mrna1;Target=comp143201_c0_seq1 1 481 +
Chr1	stalkie_big_nohaplotig	CDS	135781845	135782048	.	-	0	Parent=comp143201_c0_seq1.mrna1
Chr1	gffcl	locus	135783362	135813555	.	.	.	ID=RLOC_00011510;geneIDs=FBgn0035866.1.path1,comp170501_c0_seq1.path1;transcripts=FBgn0035866.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135784172	135813555	.	+	.	ID=FBgn0035866.1.mrna1;geneID=FBgn0035866.1.path1;Name=FBgn0035866.1;Dir=sensecoverage=99.7;identity=99.3;matches=585;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011510
Chr1	stalkie_big_nohaplotig	exon	135784172	135784269	100	+	.	Parent=FBgn0035866.1.mrna1;Target=FBgn0035866.1 3 100 +
Chr1	stalkie_big_nohaplotig	exon	135810323	135810531	100	+	.	Parent=FBgn0035866.1.mrna1;Target=FBgn0035866.1 101 309 +
Chr1	stalkie_big_nohaplotig	exon	135810608	135810733	99	+	.	Parent=FBgn0035866.1.mrna1;Target=FBgn0035866.1 310 435 +
Chr1	stalkie_big_nohaplotig	exon	135810798	135810907	98	+	.	Parent=FBgn0035866.1.mrna1;Target=FBgn0035866.1 436 545 +
Chr1	stalkie_big_nohaplotig	exon	135813510	135813555	97	+	.	Parent=FBgn0035866.1.mrna1;Target=FBgn0035866.1 546 591 +
Chr1	stalkie_big_nohaplotig	CDS	135784173	135784269	.	+	0	Parent=FBgn0035866.1.mrna1;Target=FBgn0035866.1 4 100 +
Chr1	stalkie_big_nohaplotig	CDS	135810323	135810531	.	+	2	Parent=FBgn0035866.1.mrna1;Target=FBgn0035866.1 101 309 +
Chr1	stalkie_big_nohaplotig	CDS	135810608	135810733	.	+	0	Parent=FBgn0035866.1.mrna1;Target=FBgn0035866.1 310 435 +
Chr1	stalkie_big_nohaplotig	CDS	135810798	135810907	.	+	0	Parent=FBgn0035866.1.mrna1;Target=FBgn0035866.1 436 545 +
Chr1	stalkie_big_nohaplotig	CDS	135813510	135813555	.	+	1	Parent=FBgn0035866.1.mrna1;Target=FBgn0035866.1 546 591 +
Chr1	gffcl	locus	135817328	135823370	.	+	.	ID=RLOC_00011511;geneIDs=FBgn0036157.1.path1;transcripts=FBgn0036157.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135817328	135823370	.	+	.	ID=FBgn0036157.1.mrna1;geneID=FBgn0036157.1.path1;Name=FBgn0036157.1;Dir=sensecoverage=100.0;identity=99.5;matches=1027;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011511
Chr1	stalkie_big_nohaplotig	exon	135817328	135817886	99	+	.	Parent=FBgn0036157.1.mrna1;Target=FBgn0036157.1 1 559 +
Chr1	stalkie_big_nohaplotig	exon	135818278	135818366	98	+	.	Parent=FBgn0036157.1.mrna1;Target=FBgn0036157.1 560 648 +
Chr1	stalkie_big_nohaplotig	exon	135822873	135823041	100	+	.	Parent=FBgn0036157.1.mrna1;Target=FBgn0036157.1 649 817 +
Chr1	stalkie_big_nohaplotig	exon	135823156	135823370	99	+	.	Parent=FBgn0036157.1.mrna1;Target=FBgn0036157.1 818 1032 +
Chr1	stalkie_big_nohaplotig	CDS	135817328	135817886	.	+	0	Parent=FBgn0036157.1.mrna1;Target=FBgn0036157.1 1 559 +
Chr1	stalkie_big_nohaplotig	CDS	135818278	135818366	.	+	2	Parent=FBgn0036157.1.mrna1;Target=FBgn0036157.1 560 648 +
Chr1	stalkie_big_nohaplotig	CDS	135822873	135823041	.	+	0	Parent=FBgn0036157.1.mrna1;Target=FBgn0036157.1 649 817 +
Chr1	stalkie_big_nohaplotig	CDS	135823156	135823370	.	+	2	Parent=FBgn0036157.1.mrna1;Target=FBgn0036157.1 818 1032 +
Chr1	gffcl	locus	135846980	135922352	.	+	.	ID=RLOC_00011512;geneIDs=comp135392_c0_seq1.path1;transcripts=comp135392_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135846980	135922352	.	+	.	ID=comp135392_c0_seq1.mrna1;geneID=comp135392_c0_seq1.path1;Name=comp135392_c0_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=545;mismatches=3;indels=1;unknowns=0;Target=comp135392_c0_seq1 453 548 .;locus=RLOC_00011512
Chr1	stalkie_big_nohaplotig	exon	135846980	135847225	99	+	.	Parent=comp135392_c0_seq1.mrna1;Target=comp135392_c0_seq1 304 549 -
Chr1	stalkie_big_nohaplotig	exon	135910967	135911047	100	+	.	Parent=comp135392_c0_seq1.mrna1;Target=comp135392_c0_seq1 223 303 -
Chr1	stalkie_big_nohaplotig	exon	135921977	135922074	98	+	.	Parent=comp135392_c0_seq1.mrna1;Target=comp135392_c0_seq1 124 222 -
Chr1	stalkie_big_nohaplotig	exon	135922230	135922352	99	+	.	Parent=comp135392_c0_seq1.mrna1;Target=comp135392_c0_seq1 1 123 -
Chr1	stalkie_big_nohaplotig	CDS	135846981	135847076	.	+	0	Parent=comp135392_c0_seq1.mrna1
Chr1	gffcl	locus	135894041	135894411	.	+	.	ID=RLOC_00011513;geneIDs=comp129964_c0_seq1.path1;transcripts=comp129964_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135894041	135894411	.	+	.	ID=comp129964_c0_seq1.mrna1;geneID=comp129964_c0_seq1.path1;Name=comp129964_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.5;matches=347;mismatches=23;indels=1;unknowns=0;Target=comp129964_c0_seq1 370 1 .;CDS_Target=comp129964_c0_seq1 21 10 .;locus=RLOC_00011513
Chr1	stalkie_big_nohaplotig	exon	135894041	135894411	93	+	.	Parent=comp129964_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	135894050	135894061	.	+	0	Parent=comp129964_c0_seq1.mrna1
Chr1	gffcl	locus	135922521	135923062	.	+	.	ID=RLOC_00011514;geneIDs=FBgn0263220.1.path1;transcripts=FBgn0263220.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135922521	135923062	.	+	.	ID=FBgn0263220.1.mrna1;geneID=FBgn0263220.1.path1;Name=FBgn0263220.1;Dir=sensecoverage=25.0;identity=100.0;matches=395;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011514
Chr1	stalkie_big_nohaplotig	exon	135922521	135922697	100	+	.	Parent=FBgn0263220.1.mrna1;Target=FBgn0263220.1 1 177 +
Chr1	stalkie_big_nohaplotig	exon	135922845	135923062	100	+	.	Parent=FBgn0263220.1.mrna1;Target=FBgn0263220.1 178 395 +
Chr1	stalkie_big_nohaplotig	CDS	135922521	135922697	.	+	0	Parent=FBgn0263220.1.mrna1;Target=FBgn0263220.1 1 177 +
Chr1	stalkie_big_nohaplotig	CDS	135922845	135923062	.	+	0	Parent=FBgn0263220.1.mrna1;Target=FBgn0263220.1 178 395 +
Chr1	gffcl	locus	135982652	135983256	.	-	.	ID=RLOC_00011515;geneIDs=comp113414_c0_seq1.path1;transcripts=comp113414_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135982652	135983256	.	-	.	ID=comp113414_c0_seq1.mrna1;geneID=comp113414_c0_seq1.path1;Name=comp113414_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=605;mismatches=0;indels=0;unknowns=0;Target=comp113414_c0_seq1 605 1 .;CDS_Target=comp113414_c0_seq1 420 283 .;locus=RLOC_00011515
Chr1	stalkie_big_nohaplotig	exon	135982652	135983256	100	-	.	Parent=comp113414_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	135982837	135982974	.	-	0	Parent=comp113414_c0_seq1.mrna1
Chr1	gffcl	locus	135987883	135988722	.	+	.	ID=RLOC_00011516;geneIDs=comp140520_c0_seq1.path1;transcripts=comp140520_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	135987883	135988722	.	+	.	ID=comp140520_c0_seq1.mrna1;geneID=comp140520_c0_seq1.path1;Name=comp140520_c0_seq1;Dir=antisensecoverage=100.0;identity=95.3;matches=492;mismatches=9;indels=15;unknowns=0;locus=RLOC_00011516
Chr1	stalkie_big_nohaplotig	exon	135987883	135988010	81	+	.	Parent=comp140520_c0_seq1.mrna1;Target=comp140520_c0_seq1 389 501 -
Chr1	stalkie_big_nohaplotig	exon	135988056	135988160	100	+	.	Parent=comp140520_c0_seq1.mrna1;Target=comp140520_c0_seq1 284 388 -
Chr1	stalkie_big_nohaplotig	exon	135988440	135988722	100	+	.	Parent=comp140520_c0_seq1.mrna1;Target=comp140520_c0_seq1 1 283 -
Chr1	stalkie_big_nohaplotig	CDS	135987884	135988010	.	+	0	Parent=comp140520_c0_seq1.mrna1;Target=comp140520_c0_seq1 389 500 .
Chr1	stalkie_big_nohaplotig	CDS	135988056	135988160	.	+	2	Parent=comp140520_c0_seq1.mrna1;Target=comp140520_c0_seq1 284 388 .
Chr1	stalkie_big_nohaplotig	CDS	135988440	135988561	.	+	2	Parent=comp140520_c0_seq1.mrna1;Target=comp140520_c0_seq1 162 283 .
Chr1	gffcl	locus	136024149	136025570	.	-	.	ID=RLOC_00011517;geneIDs=ORF1334.path1;transcripts=ORF1334.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136024149	136025570	.	-	.	ID=ORF1334.mrna1;geneID=ORF1334.path1;Name=ORF1334;Dir=sensecoverage=100.0;identity=97.4;matches=1108;mismatches=26;indels=3;unknowns=0;locus=RLOC_00011517
Chr1	stalkie_big_nohaplotig	exon	136024149	136024730	99	-	.	Parent=ORF1334.mrna1;Target=ORF1334 556 1137 +
Chr1	stalkie_big_nohaplotig	exon	136024790	136024923	97	-	.	Parent=ORF1334.mrna1;Target=ORF1334 422 555 +
Chr1	stalkie_big_nohaplotig	exon	136025004	136025310	94	-	.	Parent=ORF1334.mrna1;Target=ORF1334 112 421 +
Chr1	stalkie_big_nohaplotig	exon	136025366	136025431	95	-	.	Parent=ORF1334.mrna1;Target=ORF1334 46 111 +
Chr1	stalkie_big_nohaplotig	exon	136025526	136025570	97	-	.	Parent=ORF1334.mrna1;Target=ORF1334 1 45 +
Chr1	stalkie_big_nohaplotig	CDS	136024149	136024730	.	-	0	Parent=ORF1334.mrna1;Target=ORF1334 556 1137 +
Chr1	stalkie_big_nohaplotig	CDS	136024790	136024923	.	-	2	Parent=ORF1334.mrna1;Target=ORF1334 422 555 +
Chr1	stalkie_big_nohaplotig	CDS	136025004	136025310	.	-	0	Parent=ORF1334.mrna1;Target=ORF1334 112 421 +
Chr1	stalkie_big_nohaplotig	CDS	136025366	136025431	.	-	0	Parent=ORF1334.mrna1;Target=ORF1334 46 111 +
Chr1	gffcl	locus	136054535	136055138	.	-	.	ID=RLOC_00011518;geneIDs=comp152686_c0_seq1.path1;transcripts=comp152686_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136054535	136055138	.	-	.	ID=comp152686_c0_seq1.mrna1;geneID=comp152686_c0_seq1.path1;Name=comp152686_c0_seq1;Dir=sensecoverage=93.3;identity=94.7;matches=447;mismatches=21;indels=4;unknowns=0;locus=RLOC_00011518
Chr1	stalkie_big_nohaplotig	exon	136054535	136054796	90	-	.	Parent=comp152686_c0_seq1.mrna1;Target=comp152686_c0_seq1 207 472 +
Chr1	stalkie_big_nohaplotig	exon	136054863	136054928	100	-	.	Parent=comp152686_c0_seq1.mrna1;Target=comp152686_c0_seq1 141 206 +
Chr1	stalkie_big_nohaplotig	exon	136054999	136055138	99	-	.	Parent=comp152686_c0_seq1.mrna1;Target=comp152686_c0_seq1 1 140 +
Chr1	stalkie_big_nohaplotig	CDS	136054665	136054796	.	-	0	Parent=comp152686_c0_seq1.mrna1;Target=comp152686_c0_seq1 207 338 +
Chr1	stalkie_big_nohaplotig	CDS	136054863	136054928	.	-	0	Parent=comp152686_c0_seq1.mrna1;Target=comp152686_c0_seq1 141 206 +
Chr1	stalkie_big_nohaplotig	CDS	136054999	136055136	.	-	0	Parent=comp152686_c0_seq1.mrna1;Target=comp152686_c0_seq1 3 140 +
Chr1	gffcl	locus	136151334	136151702	.	+	.	ID=RLOC_00011520;geneIDs=Dv_FBgn0209645.1.path3;transcripts=Dv_FBgn0209645.1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	136151334	136151702	.	+	.	ID=Dv_FBgn0209645.1.mrna3;geneID=Dv_FBgn0209645.1.path3;Name=Dv_FBgn0209645.1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=364;mismatches=5;indels=0;unknowns=0;Target=Dv_FBgn0209645.1 369 1 .;locus=RLOC_00011520
Chr1	stalkie_big_nohaplotig	exon	136151334	136151702	98	+	.	Parent=Dv_FBgn0209645.1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	136151334	136151702	.	+	0	Parent=Dv_FBgn0209645.1.mrna3
Chr1	gffcl	locus	136184605	136184875	.	+	.	ID=RLOC_00011521;geneIDs=comp146857_c0_seq1.path1;transcripts=comp146857_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136184605	136184875	.	+	.	ID=comp146857_c0_seq1.mrna1;geneID=comp146857_c0_seq1.path1;Name=comp146857_c0_seq1;Dir=indeterminatecoverage=94.8;identity=99.6;matches=270;mismatches=1;indels=0;unknowns=0;Target=comp146857_c0_seq1 272 2 .;CDS_Target=comp146857_c0_seq1 270 232 .;locus=RLOC_00011521
Chr1	stalkie_big_nohaplotig	exon	136184605	136184875	99	+	.	Parent=comp146857_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	136184835	136184873	.	+	0	Parent=comp146857_c0_seq1.mrna1
Chr1	gffcl	locus	136185618	136190270	.	-	.	ID=RLOC_00011522;geneIDs=comp162055_c1_seq1.path1;transcripts=comp162055_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136185618	136190270	.	-	.	ID=comp162055_c1_seq1.mrna1;geneID=comp162055_c1_seq1.path1;Name=comp162055_c1_seq1;Dir=antisensecoverage=53.7;identity=98.8;matches=2281;mismatches=24;indels=4;unknowns=0;locus=RLOC_00011522
Chr1	stalkie_big_nohaplotig	exon	136185618	136187065	98	-	.	Parent=comp162055_c1_seq1.mrna1;Target=comp162055_c1_seq1 221 1666 -
Chr1	stalkie_big_nohaplotig	exon	136187133	136187252	100	-	.	Parent=comp162055_c1_seq1.mrna1;Target=comp162055_c1_seq1 1667 1786 -
Chr1	stalkie_big_nohaplotig	exon	136187312	136187486	100	-	.	Parent=comp162055_c1_seq1.mrna1;Target=comp162055_c1_seq1 1787 1961 -
Chr1	stalkie_big_nohaplotig	exon	136189641	136189839	99	-	.	Parent=comp162055_c1_seq1.mrna1;Target=comp162055_c1_seq1 1962 2160 -
Chr1	stalkie_big_nohaplotig	exon	136189905	136190270	98	-	.	Parent=comp162055_c1_seq1.mrna1;Target=comp162055_c1_seq1 2161 2526 -
Chr1	stalkie_big_nohaplotig	CDS	136186879	136187065	.	-	1	Parent=comp162055_c1_seq1.mrna1;Target=comp162055_c1_seq1 1480 1666 .
Chr1	stalkie_big_nohaplotig	CDS	136187133	136187252	.	-	1	Parent=comp162055_c1_seq1.mrna1;Target=comp162055_c1_seq1 1667 1786 .
Chr1	stalkie_big_nohaplotig	CDS	136187312	136187486	.	-	2	Parent=comp162055_c1_seq1.mrna1;Target=comp162055_c1_seq1 1787 1961 .
Chr1	stalkie_big_nohaplotig	CDS	136189641	136189839	.	-	0	Parent=comp162055_c1_seq1.mrna1;Target=comp162055_c1_seq1 1962 2160 .
Chr1	stalkie_big_nohaplotig	CDS	136189905	136190225	.	-	0	Parent=comp162055_c1_seq1.mrna1;Target=comp162055_c1_seq1 2161 2481 .
Chr1	gffcl	locus	136205735	136209109	.	+	.	ID=RLOC_00011523;geneIDs=comp157096_c0_seq1.path1;transcripts=comp157096_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136205735	136209109	.	+	.	ID=comp157096_c0_seq1.mrna1;geneID=comp157096_c0_seq1.path1;Name=comp157096_c0_seq1;Dir=antisensecoverage=99.9;identity=93.0;matches=2140;mismatches=100;indels=61;unknowns=0;locus=RLOC_00011523
Chr1	stalkie_big_nohaplotig	exon	136205735	136206113	97	+	.	Parent=comp157096_c0_seq1.mrna1;Target=comp157096_c0_seq1 1921 2291 -
Chr1	stalkie_big_nohaplotig	exon	136206235	136206458	97	+	.	Parent=comp157096_c0_seq1.mrna1;Target=comp157096_c0_seq1 1697 1920 -
Chr1	stalkie_big_nohaplotig	exon	136206530	136207095	94	+	.	Parent=comp157096_c0_seq1.mrna1;Target=comp157096_c0_seq1 1131 1696 -
Chr1	stalkie_big_nohaplotig	exon	136208029	136209109	89	+	.	Parent=comp157096_c0_seq1.mrna1;Target=comp157096_c0_seq1 1 1130 -
Chr1	stalkie_big_nohaplotig	CDS	136206396	136206458	.	+	0	Parent=comp157096_c0_seq1.mrna1;Target=comp157096_c0_seq1 1697 1759 .
Chr1	stalkie_big_nohaplotig	CDS	136206530	136206571	.	+	0	Parent=comp157096_c0_seq1.mrna1;Target=comp157096_c0_seq1 1655 1696 .
Chr1	gffcl	locus	136227959	136228706	.	+	.	ID=RLOC_00011524;geneIDs=comp140952_c0_seq1.path1;transcripts=comp140952_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136227959	136228706	.	+	.	ID=comp140952_c0_seq1.mrna1;geneID=comp140952_c0_seq1.path1;Name=comp140952_c0_seq1;Dir=indeterminatecoverage=98.1;identity=95.6;matches=724;mismatches=24;indels=9;unknowns=0;Target=comp140952_c0_seq1 772 16 .;CDS_Target=comp140952_c0_seq1 154 17 .;locus=RLOC_00011524
Chr1	stalkie_big_nohaplotig	exon	136227959	136228706	95	+	.	Parent=comp140952_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	136227960	136228097	.	+	0	Parent=comp140952_c0_seq1.mrna1
Chr1	gffcl	locus	136254083	138105555	.	+	.	ID=RLOC_00011525;geneIDs=comp140139_c0_seq1.path2;transcripts=comp140139_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	136254083	138105555	.	+	.	ID=comp140139_c0_seq1.mrna2;geneID=comp140139_c0_seq1.path2;Name=comp140139_c0_seq1;Dir=indeterminatecoverage=82.3;identity=92.3;matches=465;mismatches=29;indels=10;unknowns=0;locus=RLOC_00011525
Chr1	stalkie_big_nohaplotig	exon	136254083	136254254	88	+	.	Parent=comp140139_c0_seq1.mrna2;Target=comp140139_c0_seq1 246 76 .
Chr1	stalkie_big_nohaplotig	exon	136254345	136254655	93	+	.	Parent=comp140139_c0_seq1.mrna2;Target=comp140139_c0_seq1 597 280 .
Chr1	stalkie_big_nohaplotig	exon	138097386	138097393	100	+	.	Parent=comp140139_c0_seq1.mrna2;Target=comp140139_c0_seq1 605 598 .
Chr1	stalkie_big_nohaplotig	exon	138105551	138105555	100	+	.	Parent=comp140139_c0_seq1.mrna2;Target=comp140139_c0_seq1 610 606 .
Chr1	stalkie_big_nohaplotig	CDS	136254572	136254655	.	+	0	Parent=comp140139_c0_seq1.mrna2;Target=comp140139_c0_seq1 597 515 .
Chr1	stalkie_big_nohaplotig	CDS	138097386	138097393	.	+	0	Parent=comp140139_c0_seq1.mrna2;Target=comp140139_c0_seq1 605 598 .
Chr1	stalkie_big_nohaplotig	CDS	138105551	138105555	.	+	1	Parent=comp140139_c0_seq1.mrna2;Target=comp140139_c0_seq1 610 606 .
Chr1	gffcl	locus	136254680	136255613	.	+	.	ID=RLOC_00011526;geneIDs=FBgn0032248.4.path1;transcripts=FBgn0032248.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136254680	136255613	.	+	.	ID=FBgn0032248.4.mrna1;geneID=FBgn0032248.4.path1;Name=FBgn0032248.4;Dir=sensecoverage=100.0;identity=99.6;matches=669;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011526
Chr1	stalkie_big_nohaplotig	exon	136254680	136254970	99	+	.	Parent=FBgn0032248.4.mrna1;Target=FBgn0032248.4 1 291 +
Chr1	stalkie_big_nohaplotig	exon	136255233	136255613	99	+	.	Parent=FBgn0032248.4.mrna1;Target=FBgn0032248.4 292 672 +
Chr1	stalkie_big_nohaplotig	CDS	136254680	136254970	.	+	0	Parent=FBgn0032248.4.mrna1;Target=FBgn0032248.4 1 291 +
Chr1	stalkie_big_nohaplotig	CDS	136255233	136255613	.	+	0	Parent=FBgn0032248.4.mrna1;Target=FBgn0032248.4 292 672 +
Chr1	gffcl	locus	136268679	136269710	.	+	.	ID=RLOC_00011527;geneIDs=Dp_FBgn0244711.1.path5;transcripts=Dp_FBgn0244711.1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	136268679	136269710	.	+	.	ID=Dp_FBgn0244711.1.mrna5;geneID=Dp_FBgn0244711.1.path5;Name=Dp_FBgn0244711.1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1020;mismatches=12;indels=0;unknowns=0;Target=Dp_FBgn0244711.1 1032 1 .;locus=RLOC_00011527
Chr1	stalkie_big_nohaplotig	exon	136268679	136269710	98	+	.	Parent=Dp_FBgn0244711.1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	136268679	136269710	.	+	0	Parent=Dp_FBgn0244711.1.mrna5
Chr1	gffcl	locus	136273671	136279729	.	-	.	ID=RLOC_00011528;geneIDs=FBgn0259231.path1;transcripts=FBgn0259231.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136273671	136279729	.	-	.	ID=FBgn0259231.mrna1;geneID=FBgn0259231.path1;Name=FBgn0259231;Dir=sensecoverage=100.0;identity=99.9;matches=746;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011528
Chr1	stalkie_big_nohaplotig	exon	136273671	136274079	99	-	.	Parent=FBgn0259231.mrna1;Target=FBgn0259231 339 747 +
Chr1	stalkie_big_nohaplotig	exon	136274751	136275060	100	-	.	Parent=FBgn0259231.mrna1;Target=FBgn0259231 29 338 +
Chr1	stalkie_big_nohaplotig	exon	136279702	136279729	100	-	.	Parent=FBgn0259231.mrna1;Target=FBgn0259231 1 28 +
Chr1	stalkie_big_nohaplotig	CDS	136273671	136274079	.	-	1	Parent=FBgn0259231.mrna1;Target=FBgn0259231 339 747 +
Chr1	stalkie_big_nohaplotig	CDS	136274751	136275060	.	-	2	Parent=FBgn0259231.mrna1;Target=FBgn0259231 29 338 +
Chr1	stalkie_big_nohaplotig	CDS	136279702	136279729	.	-	0	Parent=FBgn0259231.mrna1;Target=FBgn0259231 1 28 +
Chr1	gffcl	locus	136315205	136315743	.	-	.	ID=RLOC_00011529;geneIDs=comp154527_c0_seq1.path1;transcripts=comp154527_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136315205	136315743	.	-	.	ID=comp154527_c0_seq1.mrna1;geneID=comp154527_c0_seq1.path1;Name=comp154527_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=528;mismatches=11;indels=0;unknowns=0;Target=comp154527_c0_seq1 539 1 .;CDS_Target=comp154527_c0_seq1 361 149 .;locus=RLOC_00011529
Chr1	stalkie_big_nohaplotig	exon	136315205	136315743	97	-	.	Parent=comp154527_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	136315383	136315595	.	-	0	Parent=comp154527_c0_seq1.mrna1
Chr1	gffcl	locus	136326286	136326883	.	-	.	ID=RLOC_00011530;geneIDs=comp154758_c0_seq1.path1;transcripts=comp154758_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136326286	136326883	.	-	.	ID=comp154758_c0_seq1.mrna1;geneID=comp154758_c0_seq1.path1;Name=comp154758_c0_seq1;Dir=antisensecoverage=99.1;identity=97.8;matches=523;mismatches=11;indels=1;unknowns=0;Target=comp154758_c0_seq1 131 535 .;locus=RLOC_00011530
Chr1	stalkie_big_nohaplotig	exon	136326286	136326402	100	-	.	Parent=comp154758_c0_seq1.mrna1;Target=comp154758_c0_seq1 3 119 -
Chr1	stalkie_big_nohaplotig	exon	136326467	136326883	97	-	.	Parent=comp154758_c0_seq1.mrna1;Target=comp154758_c0_seq1 120 537 -
Chr1	stalkie_big_nohaplotig	CDS	136326477	136326881	.	-	0	Parent=comp154758_c0_seq1.mrna1
Chr1	gffcl	locus	136333012	136336925	.	-	.	ID=RLOC_00011531;geneIDs=FBgn0052506.path2;transcripts=FBgn0052506.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	136333012	136336925	.	-	.	ID=FBgn0052506.mrna2;geneID=FBgn0052506.path2;Name=FBgn0052506;Dir=sensecoverage=98.0;identity=99.5;matches=1843;mismatches=10;indels=0;unknowns=0;locus=RLOC_00011531
Chr1	stalkie_big_nohaplotig	exon	136333012	136333069	100	-	.	Parent=FBgn0052506.mrna2;Target=FBgn0052506 1833 1890 +
Chr1	stalkie_big_nohaplotig	exon	136333126	136333285	100	-	.	Parent=FBgn0052506.mrna2;Target=FBgn0052506 1673 1832 +
Chr1	stalkie_big_nohaplotig	exon	136333350	136333509	99	-	.	Parent=FBgn0052506.mrna2;Target=FBgn0052506 1513 1672 +
Chr1	stalkie_big_nohaplotig	exon	136333584	136333720	99	-	.	Parent=FBgn0052506.mrna2;Target=FBgn0052506 1376 1512 +
Chr1	stalkie_big_nohaplotig	exon	136333785	136334502	99	-	.	Parent=FBgn0052506.mrna2;Target=FBgn0052506 658 1375 +
Chr1	stalkie_big_nohaplotig	exon	136336251	136336470	99	-	.	Parent=FBgn0052506.mrna2;Target=FBgn0052506 438 657 +
Chr1	stalkie_big_nohaplotig	exon	136336526	136336925	99	-	.	Parent=FBgn0052506.mrna2;Target=FBgn0052506 38 437 +
Chr1	stalkie_big_nohaplotig	CDS	136333012	136333069	.	-	0	Parent=FBgn0052506.mrna2;Target=FBgn0052506 1833 1890 +
Chr1	stalkie_big_nohaplotig	CDS	136333126	136333285	.	-	1	Parent=FBgn0052506.mrna2;Target=FBgn0052506 1673 1832 +
Chr1	stalkie_big_nohaplotig	CDS	136333350	136333509	.	-	2	Parent=FBgn0052506.mrna2;Target=FBgn0052506 1513 1672 +
Chr1	stalkie_big_nohaplotig	CDS	136333584	136333720	.	-	1	Parent=FBgn0052506.mrna2;Target=FBgn0052506 1376 1512 +
Chr1	stalkie_big_nohaplotig	CDS	136333785	136334502	.	-	2	Parent=FBgn0052506.mrna2;Target=FBgn0052506 658 1375 +
Chr1	stalkie_big_nohaplotig	CDS	136336251	136336470	.	-	0	Parent=FBgn0052506.mrna2;Target=FBgn0052506 438 657 +
Chr1	stalkie_big_nohaplotig	CDS	136336526	136336925	.	-	1	Parent=FBgn0052506.mrna2;Target=FBgn0052506 38 437 +
Chr1	gffcl	locus	136348931	136355382	.	+	.	ID=RLOC_00011532;geneIDs=FBgn0031116.1.path2;transcripts=FBgn0031116.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	136348931	136355382	.	+	.	ID=FBgn0031116.1.mrna2;geneID=FBgn0031116.1.path2;Name=FBgn0031116.1;Dir=sensecoverage=98.2;identity=99.6;matches=3546;mismatches=14;indels=0;unknowns=0;locus=RLOC_00011532
Chr1	stalkie_big_nohaplotig	exon	136348931	136349351	99	+	.	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 68 488 +
Chr1	stalkie_big_nohaplotig	exon	136349418	136349637	100	+	.	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 489 708 +
Chr1	stalkie_big_nohaplotig	exon	136349688	136349909	100	+	.	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 709 930 +
Chr1	stalkie_big_nohaplotig	exon	136349964	136350453	99	+	.	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 931 1420 +
Chr1	stalkie_big_nohaplotig	exon	136350513	136350649	100	+	.	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 1421 1557 +
Chr1	stalkie_big_nohaplotig	exon	136350716	136350875	100	+	.	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 1558 1717 +
Chr1	stalkie_big_nohaplotig	exon	136350952	136351111	100	+	.	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 1718 1877 +
Chr1	stalkie_big_nohaplotig	exon	136351180	136352260	99	+	.	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 1878 2958 +
Chr1	stalkie_big_nohaplotig	exon	136352323	136352447	98	+	.	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 2959 3083 +
Chr1	stalkie_big_nohaplotig	exon	136352510	136352689	98	+	.	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 3084 3263 +
Chr1	stalkie_big_nohaplotig	exon	136353016	136353293	99	+	.	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 3264 3541 +
Chr1	stalkie_big_nohaplotig	exon	136355297	136355382	100	+	.	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 3542 3627 +
Chr1	stalkie_big_nohaplotig	CDS	136348931	136349351	.	+	1	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 68 488 +
Chr1	stalkie_big_nohaplotig	CDS	136349418	136349637	.	+	0	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 489 708 +
Chr1	stalkie_big_nohaplotig	CDS	136349688	136349909	.	+	2	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 709 930 +
Chr1	stalkie_big_nohaplotig	CDS	136349964	136350453	.	+	2	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 931 1420 +
Chr1	stalkie_big_nohaplotig	CDS	136350513	136350649	.	+	1	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 1421 1557 +
Chr1	stalkie_big_nohaplotig	CDS	136350716	136350875	.	+	2	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 1558 1717 +
Chr1	stalkie_big_nohaplotig	CDS	136350952	136351111	.	+	1	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 1718 1877 +
Chr1	stalkie_big_nohaplotig	CDS	136351180	136352260	.	+	0	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 1878 2958 +
Chr1	stalkie_big_nohaplotig	CDS	136352323	136352447	.	+	2	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 2959 3083 +
Chr1	stalkie_big_nohaplotig	CDS	136352510	136352689	.	+	0	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 3084 3263 +
Chr1	stalkie_big_nohaplotig	CDS	136353016	136353293	.	+	0	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 3264 3541 +
Chr1	stalkie_big_nohaplotig	CDS	136355297	136355382	.	+	1	Parent=FBgn0031116.1.mrna2;Target=FBgn0031116.1 3542 3627 +
Chr1	gffcl	locus	136361797	136361833	.	+	.	ID=RLOC_00011533;geneIDs=FBgn0052506.path1;transcripts=FBgn0052506.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136361797	136361833	.	+	.	ID=FBgn0052506.mrna1;geneID=FBgn0052506.path1;Name=FBgn0052506;Dir=indeterminatecoverage=2.0;identity=100.0;matches=37;mismatches=0;indels=0;unknowns=0;Target=FBgn0052506 37 1 .;locus=RLOC_00011533
Chr1	stalkie_big_nohaplotig	exon	136361797	136361833	100	+	.	Parent=FBgn0052506.mrna1
Chr1	stalkie_big_nohaplotig	CDS	136361797	136361833	.	+	0	Parent=FBgn0052506.mrna1
Chr1	gffcl	locus	136386370	136389796	.	+	.	ID=RLOC_00011534;geneIDs=FBgn0033868.1.path1;transcripts=FBgn0033868.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136386370	136389796	.	+	.	ID=FBgn0033868.1.mrna1;geneID=FBgn0033868.1.path1;Name=FBgn0033868.1;Dir=sensecoverage=100.0;identity=99.2;matches=1598;mismatches=13;indels=0;unknowns=0;locus=RLOC_00011534
Chr1	stalkie_big_nohaplotig	exon	136386370	136386504	100	+	.	Parent=FBgn0033868.1.mrna1;Target=FBgn0033868.1 1 135 +
Chr1	stalkie_big_nohaplotig	exon	136387974	136388092	99	+	.	Parent=FBgn0033868.1.mrna1;Target=FBgn0033868.1 136 254 +
Chr1	stalkie_big_nohaplotig	exon	136388145	136388280	99	+	.	Parent=FBgn0033868.1.mrna1;Target=FBgn0033868.1 255 390 +
Chr1	stalkie_big_nohaplotig	exon	136388330	136388835	100	+	.	Parent=FBgn0033868.1.mrna1;Target=FBgn0033868.1 391 896 +
Chr1	stalkie_big_nohaplotig	exon	136388899	136389118	98	+	.	Parent=FBgn0033868.1.mrna1;Target=FBgn0033868.1 897 1116 +
Chr1	stalkie_big_nohaplotig	exon	136389192	136389441	98	+	.	Parent=FBgn0033868.1.mrna1;Target=FBgn0033868.1 1117 1366 +
Chr1	stalkie_big_nohaplotig	exon	136389496	136389569	97	+	.	Parent=FBgn0033868.1.mrna1;Target=FBgn0033868.1 1367 1440 +
Chr1	stalkie_big_nohaplotig	exon	136389626	136389796	98	+	.	Parent=FBgn0033868.1.mrna1;Target=FBgn0033868.1 1441 1611 +
Chr1	stalkie_big_nohaplotig	CDS	136386370	136386504	.	+	0	Parent=FBgn0033868.1.mrna1;Target=FBgn0033868.1 1 135 +
Chr1	stalkie_big_nohaplotig	CDS	136387974	136388092	.	+	0	Parent=FBgn0033868.1.mrna1;Target=FBgn0033868.1 136 254 +
Chr1	stalkie_big_nohaplotig	CDS	136388145	136388280	.	+	1	Parent=FBgn0033868.1.mrna1;Target=FBgn0033868.1 255 390 +
Chr1	stalkie_big_nohaplotig	CDS	136388330	136388835	.	+	0	Parent=FBgn0033868.1.mrna1;Target=FBgn0033868.1 391 896 +
Chr1	stalkie_big_nohaplotig	CDS	136388899	136389118	.	+	1	Parent=FBgn0033868.1.mrna1;Target=FBgn0033868.1 897 1116 +
Chr1	stalkie_big_nohaplotig	CDS	136389192	136389441	.	+	0	Parent=FBgn0033868.1.mrna1;Target=FBgn0033868.1 1117 1366 +
Chr1	stalkie_big_nohaplotig	CDS	136389496	136389569	.	+	2	Parent=FBgn0033868.1.mrna1;Target=FBgn0033868.1 1367 1440 +
Chr1	stalkie_big_nohaplotig	CDS	136389626	136389796	.	+	0	Parent=FBgn0033868.1.mrna1;Target=FBgn0033868.1 1441 1611 +
Chr1	gffcl	locus	136407286	136407669	.	+	.	ID=RLOC_00011536;geneIDs=comp150943_c0_seq1.path1;transcripts=comp150943_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136407286	136407669	.	+	.	ID=comp150943_c0_seq1.mrna1;geneID=comp150943_c0_seq1.path1;Name=comp150943_c0_seq1;Dir=indeterminatecoverage=98.1;identity=85.5;matches=354;mismatches=25;indels=35;unknowns=0;Target=comp150943_c0_seq1 414 6 .;CDS_Target=comp150943_c0_seq1 117 7 .;locus=RLOC_00011536
Chr1	stalkie_big_nohaplotig	exon	136407286	136407669	85	+	.	Parent=comp150943_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	136407287	136407397	.	+	0	Parent=comp150943_c0_seq1.mrna1
Chr1	gffcl	locus	136409167	136428565	.	+	.	ID=RLOC_00011537;geneIDs=comp150981_c1_seq1.path1;transcripts=comp150981_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136409167	136428565	.	+	.	ID=comp150981_c1_seq1.mrna1;geneID=comp150981_c1_seq1.path1;Name=comp150981_c1_seq1;Dir=sensecoverage=99.7;identity=97.9;matches=764;mismatches=12;indels=4;unknowns=0;locus=RLOC_00011537
Chr1	stalkie_big_nohaplotig	exon	136409167	136409267	94	+	.	Parent=comp150981_c1_seq1.mrna1;Target=comp150981_c1_seq1 1 101 +
Chr1	stalkie_big_nohaplotig	exon	136409325	136409753	99	+	.	Parent=comp150981_c1_seq1.mrna1;Target=comp150981_c1_seq1 102 530 +
Chr1	stalkie_big_nohaplotig	exon	136428318	136428565	97	+	.	Parent=comp150981_c1_seq1.mrna1;Target=comp150981_c1_seq1 531 778 +
Chr1	stalkie_big_nohaplotig	CDS	136409488	136409753	.	+	0	Parent=comp150981_c1_seq1.mrna1;Target=comp150981_c1_seq1 265 530 +
Chr1	stalkie_big_nohaplotig	CDS	136428318	136428408	.	+	1	Parent=comp150981_c1_seq1.mrna1;Target=comp150981_c1_seq1 531 621 +
Chr1	gffcl	locus	136471369	136471996	.	+	.	ID=RLOC_00011539;geneIDs=comp153297_c0_seq1.path1;transcripts=comp153297_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136471369	136471996	.	+	.	ID=comp153297_c0_seq1.mrna1;geneID=comp153297_c0_seq1.path1;Name=comp153297_c0_seq1;Dir=sensecoverage=99.8;identity=97.2;matches=556;mismatches=15;indels=1;unknowns=0;locus=RLOC_00011539
Chr1	stalkie_big_nohaplotig	exon	136471369	136471615	98	+	.	Parent=comp153297_c0_seq1.mrna1;Target=comp153297_c0_seq1 2 248 +
Chr1	stalkie_big_nohaplotig	exon	136471672	136471996	96	+	.	Parent=comp153297_c0_seq1.mrna1;Target=comp153297_c0_seq1 249 572 +
Chr1	stalkie_big_nohaplotig	CDS	136471478	136471615	.	+	0	Parent=comp153297_c0_seq1.mrna1;Target=comp153297_c0_seq1 111 248 +
Chr1	stalkie_big_nohaplotig	CDS	136471672	136471803	.	+	0	Parent=comp153297_c0_seq1.mrna1;Target=comp153297_c0_seq1 249 380 +
Chr1	gffcl	locus	136494959	136499590	.	-	.	ID=RLOC_00011540;geneIDs=FBgn0030949.1.path1,comp162973_c4_seq1.path1;transcripts=FBgn0030949.1.mrna1,comp162973_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136494959	136499590	.	-	.	ID=FBgn0030949.1.mrna1;geneID=FBgn0030949.1.path1;Name=FBgn0030949.1;Dir=sensecoverage=100.0;identity=98.7;matches=1504;mismatches=20;indels=0;unknowns=0;locus=RLOC_00011540
Chr1	stalkie_big_nohaplotig	exon	136494959	136495122	99	-	.	Parent=FBgn0030949.1.mrna1;Target=FBgn0030949.1 1361 1524 +
Chr1	stalkie_big_nohaplotig	exon	136495181	136495302	98	-	.	Parent=FBgn0030949.1.mrna1;Target=FBgn0030949.1 1239 1360 +
Chr1	stalkie_big_nohaplotig	exon	136496347	136496491	99	-	.	Parent=FBgn0030949.1.mrna1;Target=FBgn0030949.1 1094 1238 +
Chr1	stalkie_big_nohaplotig	exon	136496930	136497056	99	-	.	Parent=FBgn0030949.1.mrna1;Target=FBgn0030949.1 967 1093 +
Chr1	stalkie_big_nohaplotig	exon	136497112	136497364	96	-	.	Parent=FBgn0030949.1.mrna1;Target=FBgn0030949.1 714 966 +
Chr1	stalkie_big_nohaplotig	exon	136497424	136497611	97	-	.	Parent=FBgn0030949.1.mrna1;Target=FBgn0030949.1 526 713 +
Chr1	stalkie_big_nohaplotig	exon	136498850	136498945	100	-	.	Parent=FBgn0030949.1.mrna1;Target=FBgn0030949.1 430 525 +
Chr1	stalkie_big_nohaplotig	exon	136499036	136499276	100	-	.	Parent=FBgn0030949.1.mrna1;Target=FBgn0030949.1 189 429 +
Chr1	stalkie_big_nohaplotig	exon	136499403	136499590	99	-	.	Parent=FBgn0030949.1.mrna1;Target=FBgn0030949.1 1 188 +
Chr1	stalkie_big_nohaplotig	CDS	136494959	136495122	.	-	2	Parent=FBgn0030949.1.mrna1;Target=FBgn0030949.1 1361 1524 +
Chr1	stalkie_big_nohaplotig	CDS	136495181	136495302	.	-	1	Parent=FBgn0030949.1.mrna1;Target=FBgn0030949.1 1239 1360 +
Chr1	stalkie_big_nohaplotig	CDS	136496347	136496491	.	-	2	Parent=FBgn0030949.1.mrna1;Target=FBgn0030949.1 1094 1238 +
Chr1	stalkie_big_nohaplotig	CDS	136496930	136497056	.	-	0	Parent=FBgn0030949.1.mrna1;Target=FBgn0030949.1 967 1093 +
Chr1	stalkie_big_nohaplotig	CDS	136497112	136497364	.	-	1	Parent=FBgn0030949.1.mrna1;Target=FBgn0030949.1 714 966 +
Chr1	stalkie_big_nohaplotig	CDS	136497424	136497611	.	-	0	Parent=FBgn0030949.1.mrna1;Target=FBgn0030949.1 526 713 +
Chr1	stalkie_big_nohaplotig	CDS	136498850	136498945	.	-	0	Parent=FBgn0030949.1.mrna1;Target=FBgn0030949.1 430 525 +
Chr1	stalkie_big_nohaplotig	CDS	136499036	136499276	.	-	1	Parent=FBgn0030949.1.mrna1;Target=FBgn0030949.1 189 429 +
Chr1	stalkie_big_nohaplotig	CDS	136499403	136499590	.	-	0	Parent=FBgn0030949.1.mrna1;Target=FBgn0030949.1 1 188 +
Chr1	stalkie_big_nohaplotig	mRNA	136498077	136498873	.	-	.	ID=comp162973_c4_seq1.mrna1;geneID=comp162973_c4_seq1.path1;Name=comp162973_c4_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=772;mismatches=25;indels=0;unknowns=0;Target=comp162973_c4_seq1 797 1 .;CDS_Target=comp162973_c4_seq1 751 551 .;locus=RLOC_00011540
Chr1	stalkie_big_nohaplotig	exon	136498077	136498873	96	-	.	Parent=comp162973_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	136498123	136498323	.	-	0	Parent=comp162973_c4_seq1.mrna1
Chr1	gffcl	locus	136495780	136496056	.	+	.	ID=RLOC_00011541;geneIDs=comp150178_c0_seq1.path1;transcripts=comp150178_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136495780	136496056	.	+	.	ID=comp150178_c0_seq1.mrna1;geneID=comp150178_c0_seq1.path1;Name=comp150178_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.4;matches=269;mismatches=6;indels=13;unknowns=0;Target=comp150178_c0_seq1 286 1 .;CDS_Target=comp150178_c0_seq1 181 143 .;locus=RLOC_00011541
Chr1	stalkie_big_nohaplotig	exon	136495780	136496056	93	+	.	Parent=comp150178_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	136495911	136495951	.	+	0	Parent=comp150178_c0_seq1.mrna1
Chr1	gffcl	locus	136525335	136526579	.	-	.	ID=RLOC_00011542;geneIDs=comp148627_c0_seq1.path1;transcripts=comp148627_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136525335	136526579	.	-	.	ID=comp148627_c0_seq1.mrna1;geneID=comp148627_c0_seq1.path1;Name=comp148627_c0_seq1;Dir=sensecoverage=97.8;identity=93.4;matches=941;mismatches=29;indels=37;unknowns=0;locus=RLOC_00011542
Chr1	stalkie_big_nohaplotig	exon	136525335	136525760	89	-	.	Parent=comp148627_c0_seq1.mrna1;Target=comp148627_c0_seq1 577 976 +
Chr1	stalkie_big_nohaplotig	exon	136525822	136525923	99	-	.	Parent=comp148627_c0_seq1.mrna1;Target=comp148627_c0_seq1 475 576 +
Chr1	stalkie_big_nohaplotig	exon	136525990	136526177	97	-	.	Parent=comp148627_c0_seq1.mrna1;Target=comp148627_c0_seq1 287 474 +
Chr1	stalkie_big_nohaplotig	exon	136526234	136526335	99	-	.	Parent=comp148627_c0_seq1.mrna1;Target=comp148627_c0_seq1 185 286 +
Chr1	stalkie_big_nohaplotig	exon	136526391	136526579	91	-	.	Parent=comp148627_c0_seq1.mrna1;Target=comp148627_c0_seq1 7 184 +
Chr1	stalkie_big_nohaplotig	CDS	136525575	136525760	.	-	0	Parent=comp148627_c0_seq1.mrna1;Target=comp148627_c0_seq1 577 762 +
Chr1	stalkie_big_nohaplotig	CDS	136525822	136525923	.	-	0	Parent=comp148627_c0_seq1.mrna1;Target=comp148627_c0_seq1 475 576 +
Chr1	stalkie_big_nohaplotig	CDS	136525990	136526177	.	-	2	Parent=comp148627_c0_seq1.mrna1;Target=comp148627_c0_seq1 287 474 +
Chr1	stalkie_big_nohaplotig	CDS	136526234	136526335	.	-	2	Parent=comp148627_c0_seq1.mrna1;Target=comp148627_c0_seq1 185 286 +
Chr1	stalkie_big_nohaplotig	CDS	136526391	136526457	.	-	0	Parent=comp148627_c0_seq1.mrna1;Target=comp148627_c0_seq1 118 184 +
Chr1	gffcl	locus	136552504	138451320	.	+	.	ID=RLOC_00011543;geneIDs=comp52111_c0_seq1.path1;transcripts=comp52111_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136552504	138451320	.	+	.	ID=comp52111_c0_seq1.mrna1;geneID=comp52111_c0_seq1.path1;Name=comp52111_c0_seq1;Dir=indeterminatecoverage=60.3;identity=100.0;matches=251;mismatches=0;indels=0;unknowns=0;Target=comp52111_c0_seq1 93 1 .;locus=RLOC_00011543
Chr1	stalkie_big_nohaplotig	exon	136552504	136552737	100	+	.	Parent=comp52111_c0_seq1.mrna1;Target=comp52111_c0_seq1 234 1 .
Chr1	stalkie_big_nohaplotig	exon	138436221	138436222	100	+	.	Parent=comp52111_c0_seq1.mrna1;Target=comp52111_c0_seq1 236 235 .
Chr1	stalkie_big_nohaplotig	exon	138443031	138443034	100	+	.	Parent=comp52111_c0_seq1.mrna1;Target=comp52111_c0_seq1 240 237 .
Chr1	stalkie_big_nohaplotig	exon	138443139	138443144	100	+	.	Parent=comp52111_c0_seq1.mrna1;Target=comp52111_c0_seq1 246 241 .
Chr1	stalkie_big_nohaplotig	exon	138451316	138451320	100	+	.	Parent=comp52111_c0_seq1.mrna1;Target=comp52111_c0_seq1 251 247 .
Chr1	stalkie_big_nohaplotig	CDS	136552504	136552596	.	+	0	Parent=comp52111_c0_seq1.mrna1
Chr1	gffcl	locus	136553033	136561767	.	+	.	ID=RLOC_00011544;geneIDs=FBgn0010383.1.path1;transcripts=FBgn0010383.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136553033	136561767	.	+	.	ID=FBgn0010383.1.mrna1;geneID=FBgn0010383.1.path1;Name=FBgn0010383.1;Dir=sensecoverage=100.0;identity=99.7;matches=1660;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011544
Chr1	stalkie_big_nohaplotig	exon	136553033	136553468	99	+	.	Parent=FBgn0010383.1.mrna1;Target=FBgn0010383.1 1 436 +
Chr1	stalkie_big_nohaplotig	exon	136556797	136556918	100	+	.	Parent=FBgn0010383.1.mrna1;Target=FBgn0010383.1 437 558 +
Chr1	stalkie_big_nohaplotig	exon	136557144	136557573	99	+	.	Parent=FBgn0010383.1.mrna1;Target=FBgn0010383.1 559 988 +
Chr1	stalkie_big_nohaplotig	exon	136558343	136558607	99	+	.	Parent=FBgn0010383.1.mrna1;Target=FBgn0010383.1 989 1253 +
Chr1	stalkie_big_nohaplotig	exon	136561356	136561767	100	+	.	Parent=FBgn0010383.1.mrna1;Target=FBgn0010383.1 1254 1665 +
Chr1	stalkie_big_nohaplotig	CDS	136553033	136553468	.	+	0	Parent=FBgn0010383.1.mrna1;Target=FBgn0010383.1 1 436 +
Chr1	stalkie_big_nohaplotig	CDS	136556797	136556918	.	+	2	Parent=FBgn0010383.1.mrna1;Target=FBgn0010383.1 437 558 +
Chr1	stalkie_big_nohaplotig	CDS	136557144	136557573	.	+	0	Parent=FBgn0010383.1.mrna1;Target=FBgn0010383.1 559 988 +
Chr1	stalkie_big_nohaplotig	CDS	136558343	136558607	.	+	2	Parent=FBgn0010383.1.mrna1;Target=FBgn0010383.1 989 1253 +
Chr1	stalkie_big_nohaplotig	CDS	136561356	136561767	.	+	1	Parent=FBgn0010383.1.mrna1;Target=FBgn0010383.1 1254 1665 +
Chr1	gffcl	locus	136564405	136567479	.	-	.	ID=RLOC_00011545;geneIDs=FBgn0004959.1.path1;transcripts=FBgn0004959.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136564405	136567479	.	-	.	ID=FBgn0004959.1.mrna1;geneID=FBgn0004959.1.path1;Name=FBgn0004959.1;Dir=sensecoverage=99.5;identity=99.4;matches=1537;mismatches=10;indels=0;unknowns=0;locus=RLOC_00011545
Chr1	stalkie_big_nohaplotig	exon	136564405	136564896	98	-	.	Parent=FBgn0004959.1.mrna1;Target=FBgn0004959.1 1063 1554 +
Chr1	stalkie_big_nohaplotig	exon	136564955	136565345	99	-	.	Parent=FBgn0004959.1.mrna1;Target=FBgn0004959.1 672 1062 +
Chr1	stalkie_big_nohaplotig	exon	136565482	136565687	100	-	.	Parent=FBgn0004959.1.mrna1;Target=FBgn0004959.1 466 671 +
Chr1	stalkie_big_nohaplotig	exon	136566116	136566264	99	-	.	Parent=FBgn0004959.1.mrna1;Target=FBgn0004959.1 317 465 +
Chr1	stalkie_big_nohaplotig	exon	136567171	136567479	99	-	.	Parent=FBgn0004959.1.mrna1;Target=FBgn0004959.1 8 316 +
Chr1	stalkie_big_nohaplotig	CDS	136564405	136564896	.	-	0	Parent=FBgn0004959.1.mrna1;Target=FBgn0004959.1 1063 1554 +
Chr1	stalkie_big_nohaplotig	CDS	136564955	136565345	.	-	1	Parent=FBgn0004959.1.mrna1;Target=FBgn0004959.1 672 1062 +
Chr1	stalkie_big_nohaplotig	CDS	136565482	136565687	.	-	0	Parent=FBgn0004959.1.mrna1;Target=FBgn0004959.1 466 671 +
Chr1	stalkie_big_nohaplotig	CDS	136566116	136566264	.	-	2	Parent=FBgn0004959.1.mrna1;Target=FBgn0004959.1 317 465 +
Chr1	stalkie_big_nohaplotig	CDS	136567171	136567477	.	-	0	Parent=FBgn0004959.1.mrna1;Target=FBgn0004959.1 10 316 +
Chr1	gffcl	locus	136650825	136656157	.	-	.	ID=RLOC_00011546;geneIDs=FBgn0001079.1.path1;transcripts=FBgn0001079.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136650825	136656157	.	-	.	ID=FBgn0001079.1.mrna1;geneID=FBgn0001079.1.path1;Name=FBgn0001079.1;Dir=sensecoverage=100.0;identity=99.2;matches=2386;mismatches=20;indels=0;unknowns=0;locus=RLOC_00011546
Chr1	stalkie_big_nohaplotig	exon	136650825	136650869	100	-	.	Parent=FBgn0001079.1.mrna1;Target=FBgn0001079.1 2362 2406 +
Chr1	stalkie_big_nohaplotig	exon	136650930	136651177	100	-	.	Parent=FBgn0001079.1.mrna1;Target=FBgn0001079.1 2114 2361 +
Chr1	stalkie_big_nohaplotig	exon	136653286	136653330	100	-	.	Parent=FBgn0001079.1.mrna1;Target=FBgn0001079.1 2069 2113 +
Chr1	stalkie_big_nohaplotig	exon	136653409	136653682	100	-	.	Parent=FBgn0001079.1.mrna1;Target=FBgn0001079.1 1795 2068 +
Chr1	stalkie_big_nohaplotig	exon	136653749	136653877	99	-	.	Parent=FBgn0001079.1.mrna1;Target=FBgn0001079.1 1666 1794 +
Chr1	stalkie_big_nohaplotig	exon	136654241	136654391	100	-	.	Parent=FBgn0001079.1.mrna1;Target=FBgn0001079.1 1515 1665 +
Chr1	stalkie_big_nohaplotig	exon	136654455	136655105	98	-	.	Parent=FBgn0001079.1.mrna1;Target=FBgn0001079.1 864 1514 +
Chr1	stalkie_big_nohaplotig	exon	136655166	136655326	100	-	.	Parent=FBgn0001079.1.mrna1;Target=FBgn0001079.1 703 863 +
Chr1	stalkie_big_nohaplotig	exon	136655390	136655974	99	-	.	Parent=FBgn0001079.1.mrna1;Target=FBgn0001079.1 118 702 +
Chr1	stalkie_big_nohaplotig	exon	136656041	136656157	95	-	.	Parent=FBgn0001079.1.mrna1;Target=FBgn0001079.1 1 117 +
Chr1	stalkie_big_nohaplotig	CDS	136650825	136650869	.	-	0	Parent=FBgn0001079.1.mrna1;Target=FBgn0001079.1 2362 2406 +
Chr1	stalkie_big_nohaplotig	CDS	136650930	136651177	.	-	2	Parent=FBgn0001079.1.mrna1;Target=FBgn0001079.1 2114 2361 +
Chr1	stalkie_big_nohaplotig	CDS	136653286	136653330	.	-	2	Parent=FBgn0001079.1.mrna1;Target=FBgn0001079.1 2069 2113 +
Chr1	stalkie_big_nohaplotig	CDS	136653409	136653682	.	-	0	Parent=FBgn0001079.1.mrna1;Target=FBgn0001079.1 1795 2068 +
Chr1	stalkie_big_nohaplotig	CDS	136653749	136653877	.	-	0	Parent=FBgn0001079.1.mrna1;Target=FBgn0001079.1 1666 1794 +
Chr1	stalkie_big_nohaplotig	CDS	136654241	136654391	.	-	1	Parent=FBgn0001079.1.mrna1;Target=FBgn0001079.1 1515 1665 +
Chr1	stalkie_big_nohaplotig	CDS	136654455	136655105	.	-	1	Parent=FBgn0001079.1.mrna1;Target=FBgn0001079.1 864 1514 +
Chr1	stalkie_big_nohaplotig	CDS	136655166	136655326	.	-	0	Parent=FBgn0001079.1.mrna1;Target=FBgn0001079.1 703 863 +
Chr1	stalkie_big_nohaplotig	CDS	136655390	136655974	.	-	0	Parent=FBgn0001079.1.mrna1;Target=FBgn0001079.1 118 702 +
Chr1	stalkie_big_nohaplotig	CDS	136656041	136656157	.	-	0	Parent=FBgn0001079.1.mrna1;Target=FBgn0001079.1 1 117 +
Chr1	gffcl	locus	136659489	136661468	.	+	.	ID=RLOC_00011547;geneIDs=FBgn0030060.1.path1;transcripts=FBgn0030060.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136659489	136661468	.	+	.	ID=FBgn0030060.1.mrna1;geneID=FBgn0030060.1.path1;Name=FBgn0030060.1;Dir=sensecoverage=100.0;identity=99.4;matches=1247;mismatches=7;indels=0;unknowns=0;locus=RLOC_00011547
Chr1	stalkie_big_nohaplotig	exon	136659489	136659673	100	+	.	Parent=FBgn0030060.1.mrna1;Target=FBgn0030060.1 1 185 +
Chr1	stalkie_big_nohaplotig	exon	136659736	136659999	99	+	.	Parent=FBgn0030060.1.mrna1;Target=FBgn0030060.1 186 449 +
Chr1	stalkie_big_nohaplotig	exon	136660065	136660191	100	+	.	Parent=FBgn0030060.1.mrna1;Target=FBgn0030060.1 450 576 +
Chr1	stalkie_big_nohaplotig	exon	136660257	136660434	98	+	.	Parent=FBgn0030060.1.mrna1;Target=FBgn0030060.1 577 754 +
Chr1	stalkie_big_nohaplotig	exon	136660897	136661099	99	+	.	Parent=FBgn0030060.1.mrna1;Target=FBgn0030060.1 755 957 +
Chr1	stalkie_big_nohaplotig	exon	136661172	136661468	99	+	.	Parent=FBgn0030060.1.mrna1;Target=FBgn0030060.1 958 1254 +
Chr1	stalkie_big_nohaplotig	CDS	136659489	136659673	.	+	0	Parent=FBgn0030060.1.mrna1;Target=FBgn0030060.1 1 185 +
Chr1	stalkie_big_nohaplotig	CDS	136659736	136659999	.	+	1	Parent=FBgn0030060.1.mrna1;Target=FBgn0030060.1 186 449 +
Chr1	stalkie_big_nohaplotig	CDS	136660065	136660191	.	+	1	Parent=FBgn0030060.1.mrna1;Target=FBgn0030060.1 450 576 +
Chr1	stalkie_big_nohaplotig	CDS	136660257	136660434	.	+	0	Parent=FBgn0030060.1.mrna1;Target=FBgn0030060.1 577 754 +
Chr1	stalkie_big_nohaplotig	CDS	136660897	136661099	.	+	2	Parent=FBgn0030060.1.mrna1;Target=FBgn0030060.1 755 957 +
Chr1	stalkie_big_nohaplotig	CDS	136661172	136661468	.	+	0	Parent=FBgn0030060.1.mrna1;Target=FBgn0030060.1 958 1254 +
Chr1	gffcl	locus	136661656	136665271	.	-	.	ID=RLOC_00011548;geneIDs=FBgn0041629.1.path1;transcripts=FBgn0041629.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136661656	136665271	.	-	.	ID=FBgn0041629.1.mrna1;geneID=FBgn0041629.1.path1;Name=FBgn0041629.1;Dir=sensecoverage=100.0;identity=99.7;matches=1782;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011548
Chr1	stalkie_big_nohaplotig	exon	136661656	136661834	99	-	.	Parent=FBgn0041629.1.mrna1;Target=FBgn0041629.1 1610 1788 +
Chr1	stalkie_big_nohaplotig	exon	136662199	136663004	99	-	.	Parent=FBgn0041629.1.mrna1;Target=FBgn0041629.1 804 1609 +
Chr1	stalkie_big_nohaplotig	exon	136663063	136663281	99	-	.	Parent=FBgn0041629.1.mrna1;Target=FBgn0041629.1 585 803 +
Chr1	stalkie_big_nohaplotig	exon	136663349	136663442	98	-	.	Parent=FBgn0041629.1.mrna1;Target=FBgn0041629.1 491 584 +
Chr1	stalkie_big_nohaplotig	exon	136664727	136665127	99	-	.	Parent=FBgn0041629.1.mrna1;Target=FBgn0041629.1 90 490 +
Chr1	stalkie_big_nohaplotig	exon	136665183	136665271	100	-	.	Parent=FBgn0041629.1.mrna1;Target=FBgn0041629.1 1 89 +
Chr1	stalkie_big_nohaplotig	CDS	136661656	136661834	.	-	2	Parent=FBgn0041629.1.mrna1;Target=FBgn0041629.1 1610 1788 +
Chr1	stalkie_big_nohaplotig	CDS	136662199	136663004	.	-	1	Parent=FBgn0041629.1.mrna1;Target=FBgn0041629.1 804 1609 +
Chr1	stalkie_big_nohaplotig	CDS	136663063	136663281	.	-	1	Parent=FBgn0041629.1.mrna1;Target=FBgn0041629.1 585 803 +
Chr1	stalkie_big_nohaplotig	CDS	136663349	136663442	.	-	2	Parent=FBgn0041629.1.mrna1;Target=FBgn0041629.1 491 584 +
Chr1	stalkie_big_nohaplotig	CDS	136664727	136665127	.	-	1	Parent=FBgn0041629.1.mrna1;Target=FBgn0041629.1 90 490 +
Chr1	stalkie_big_nohaplotig	CDS	136665183	136665271	.	-	0	Parent=FBgn0041629.1.mrna1;Target=FBgn0041629.1 1 89 +
Chr1	gffcl	locus	136665298	136677247	.	-	.	ID=RLOC_00011549;geneIDs=comp92225_c0_seq1.path1;transcripts=comp92225_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136665298	136677247	.	-	.	ID=comp92225_c0_seq1.mrna1;geneID=comp92225_c0_seq1.path1;Name=comp92225_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=233;mismatches=0;indels=0;unknowns=0;Target=comp92225_c0_seq1 3 116 +;locus=RLOC_00011549
Chr1	stalkie_big_nohaplotig	exon	136665298	136665382	100	-	.	Parent=comp92225_c0_seq1.mrna1;Target=comp92225_c0_seq1 149 233 +
Chr1	stalkie_big_nohaplotig	exon	136677100	136677247	100	-	.	Parent=comp92225_c0_seq1.mrna1;Target=comp92225_c0_seq1 1 148 +
Chr1	stalkie_big_nohaplotig	CDS	136677132	136677245	.	-	0	Parent=comp92225_c0_seq1.mrna1
Chr1	gffcl	locus	136709432	136721905	.	+	.	ID=RLOC_00011550;geneIDs=FBgn0030058.1.path1;transcripts=FBgn0030058.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136709432	136721905	.	+	.	ID=FBgn0030058.1.mrna1;geneID=FBgn0030058.1.path1;Name=FBgn0030058.1;Dir=sensecoverage=100.0;identity=99.2;matches=899;mismatches=7;indels=0;unknowns=0;locus=RLOC_00011550
Chr1	stalkie_big_nohaplotig	exon	136709432	136709662	99	+	.	Parent=FBgn0030058.1.mrna1;Target=FBgn0030058.1 1 231 +
Chr1	stalkie_big_nohaplotig	exon	136720974	136721088	99	+	.	Parent=FBgn0030058.1.mrna1;Target=FBgn0030058.1 232 346 +
Chr1	stalkie_big_nohaplotig	exon	136721346	136721905	99	+	.	Parent=FBgn0030058.1.mrna1;Target=FBgn0030058.1 347 906 +
Chr1	stalkie_big_nohaplotig	CDS	136709432	136709662	.	+	0	Parent=FBgn0030058.1.mrna1;Target=FBgn0030058.1 1 231 +
Chr1	stalkie_big_nohaplotig	CDS	136720974	136721088	.	+	0	Parent=FBgn0030058.1.mrna1;Target=FBgn0030058.1 232 346 +
Chr1	stalkie_big_nohaplotig	CDS	136721346	136721905	.	+	2	Parent=FBgn0030058.1.mrna1;Target=FBgn0030058.1 347 906 +
Chr1	gffcl	locus	136715763	136725004	.	+	.	ID=RLOC_00011551;geneIDs=FBgn0030057.1.path1;transcripts=FBgn0030057.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136715763	136725004	.	+	.	ID=FBgn0030057.1.mrna1;geneID=FBgn0030057.1.path1;Name=FBgn0030057.1;Dir=sensecoverage=100.0;identity=99.4;matches=898;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011551
Chr1	stalkie_big_nohaplotig	exon	136715763	136715877	99	+	.	Parent=FBgn0030057.1.mrna1;Target=FBgn0030057.1 1 115 +
Chr1	stalkie_big_nohaplotig	exon	136715935	136716172	100	+	.	Parent=FBgn0030057.1.mrna1;Target=FBgn0030057.1 116 353 +
Chr1	stalkie_big_nohaplotig	exon	136724182	136724340	99	+	.	Parent=FBgn0030057.1.mrna1;Target=FBgn0030057.1 354 512 +
Chr1	stalkie_big_nohaplotig	exon	136724401	136724550	100	+	.	Parent=FBgn0030057.1.mrna1;Target=FBgn0030057.1 513 662 +
Chr1	stalkie_big_nohaplotig	exon	136724610	136724736	100	+	.	Parent=FBgn0030057.1.mrna1;Target=FBgn0030057.1 663 789 +
Chr1	stalkie_big_nohaplotig	exon	136724891	136725004	97	+	.	Parent=FBgn0030057.1.mrna1;Target=FBgn0030057.1 790 903 +
Chr1	stalkie_big_nohaplotig	CDS	136715763	136715877	.	+	0	Parent=FBgn0030057.1.mrna1;Target=FBgn0030057.1 1 115 +
Chr1	stalkie_big_nohaplotig	CDS	136715935	136716172	.	+	2	Parent=FBgn0030057.1.mrna1;Target=FBgn0030057.1 116 353 +
Chr1	stalkie_big_nohaplotig	CDS	136724182	136724340	.	+	1	Parent=FBgn0030057.1.mrna1;Target=FBgn0030057.1 354 512 +
Chr1	stalkie_big_nohaplotig	CDS	136724401	136724550	.	+	1	Parent=FBgn0030057.1.mrna1;Target=FBgn0030057.1 513 662 +
Chr1	stalkie_big_nohaplotig	CDS	136724610	136724736	.	+	1	Parent=FBgn0030057.1.mrna1;Target=FBgn0030057.1 663 789 +
Chr1	stalkie_big_nohaplotig	CDS	136724891	136725004	.	+	0	Parent=FBgn0030057.1.mrna1;Target=FBgn0030057.1 790 903 +
Chr1	gffcl	locus	136727487	136728775	.	-	.	ID=RLOC_00011552;geneIDs=FBgn0030056.1.path1;transcripts=FBgn0030056.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136727487	136728775	.	-	.	ID=FBgn0030056.1.mrna1;geneID=FBgn0030056.1.path1;Name=FBgn0030056.1;Dir=sensecoverage=100.0;identity=99.9;matches=851;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011552
Chr1	stalkie_big_nohaplotig	exon	136727487	136727624	100	-	.	Parent=FBgn0030056.1.mrna1;Target=FBgn0030056.1 715 852 +
Chr1	stalkie_big_nohaplotig	exon	136727995	136728131	100	-	.	Parent=FBgn0030056.1.mrna1;Target=FBgn0030056.1 578 714 +
Chr1	stalkie_big_nohaplotig	exon	136728199	136728775	99	-	.	Parent=FBgn0030056.1.mrna1;Target=FBgn0030056.1 1 577 +
Chr1	stalkie_big_nohaplotig	CDS	136727487	136727624	.	-	0	Parent=FBgn0030056.1.mrna1;Target=FBgn0030056.1 715 852 +
Chr1	stalkie_big_nohaplotig	CDS	136727995	136728131	.	-	2	Parent=FBgn0030056.1.mrna1;Target=FBgn0030056.1 578 714 +
Chr1	stalkie_big_nohaplotig	CDS	136728199	136728775	.	-	0	Parent=FBgn0030056.1.mrna1;Target=FBgn0030056.1 1 577 +
Chr1	gffcl	locus	136732874	136734213	.	-	.	ID=RLOC_00011553;geneIDs=FBgn0033542.1.path1;transcripts=FBgn0033542.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136732874	136734213	.	-	.	ID=FBgn0033542.1.mrna1;geneID=FBgn0033542.1.path1;Name=FBgn0033542.1;Dir=sensecoverage=100.0;identity=99.3;matches=1055;mismatches=7;indels=0;unknowns=0;locus=RLOC_00011553
Chr1	stalkie_big_nohaplotig	exon	136732874	136733308	99	-	.	Parent=FBgn0033542.1.mrna1;Target=FBgn0033542.1 628 1062 +
Chr1	stalkie_big_nohaplotig	exon	136733378	136733449	98	-	.	Parent=FBgn0033542.1.mrna1;Target=FBgn0033542.1 556 627 +
Chr1	stalkie_big_nohaplotig	exon	136733524	136733684	100	-	.	Parent=FBgn0033542.1.mrna1;Target=FBgn0033542.1 395 555 +
Chr1	stalkie_big_nohaplotig	exon	136733763	136733915	99	-	.	Parent=FBgn0033542.1.mrna1;Target=FBgn0033542.1 242 394 +
Chr1	stalkie_big_nohaplotig	exon	136733973	136734213	99	-	.	Parent=FBgn0033542.1.mrna1;Target=FBgn0033542.1 1 241 +
Chr1	stalkie_big_nohaplotig	CDS	136732874	136733308	.	-	0	Parent=FBgn0033542.1.mrna1;Target=FBgn0033542.1 628 1062 +
Chr1	stalkie_big_nohaplotig	CDS	136733378	136733449	.	-	0	Parent=FBgn0033542.1.mrna1;Target=FBgn0033542.1 556 627 +
Chr1	stalkie_big_nohaplotig	CDS	136733524	136733684	.	-	2	Parent=FBgn0033542.1.mrna1;Target=FBgn0033542.1 395 555 +
Chr1	stalkie_big_nohaplotig	CDS	136733763	136733915	.	-	2	Parent=FBgn0033542.1.mrna1;Target=FBgn0033542.1 242 394 +
Chr1	stalkie_big_nohaplotig	CDS	136733973	136734213	.	-	0	Parent=FBgn0033542.1.mrna1;Target=FBgn0033542.1 1 241 +
Chr1	gffcl	locus	136752663	136774573	.	+	.	ID=RLOC_00011554;geneIDs=FBgn0026181.1.path1;transcripts=FBgn0026181.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136752663	136774573	.	+	.	ID=FBgn0026181.1.mrna1;geneID=FBgn0026181.1.path1;Name=FBgn0026181.1;Dir=sensecoverage=100.0;identity=99.8;matches=4145;mismatches=10;indels=0;unknowns=0;locus=RLOC_00011554
Chr1	stalkie_big_nohaplotig	exon	136752663	136752721	100	+	.	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 1 59 +
Chr1	stalkie_big_nohaplotig	exon	136768527	136768672	98	+	.	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 60 205 +
Chr1	stalkie_big_nohaplotig	exon	136768742	136769767	99	+	.	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 206 1231 +
Chr1	stalkie_big_nohaplotig	exon	136769866	136770785	99	+	.	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 1232 2151 +
Chr1	stalkie_big_nohaplotig	exon	136771325	136772249	99	+	.	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 2152 3076 +
Chr1	stalkie_big_nohaplotig	exon	136772318	136772472	100	+	.	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 3077 3231 +
Chr1	stalkie_big_nohaplotig	exon	136772614	136772733	100	+	.	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 3232 3351 +
Chr1	stalkie_big_nohaplotig	exon	136772857	136773047	99	+	.	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 3352 3542 +
Chr1	stalkie_big_nohaplotig	exon	136773120	136773313	100	+	.	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 3543 3736 +
Chr1	stalkie_big_nohaplotig	exon	136773713	136773818	100	+	.	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 3737 3842 +
Chr1	stalkie_big_nohaplotig	exon	136773879	136774106	100	+	.	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 3843 4070 +
Chr1	stalkie_big_nohaplotig	exon	136774489	136774573	100	+	.	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 4071 4155 +
Chr1	stalkie_big_nohaplotig	CDS	136752663	136752721	.	+	0	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 1 59 +
Chr1	stalkie_big_nohaplotig	CDS	136768527	136768672	.	+	1	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 60 205 +
Chr1	stalkie_big_nohaplotig	CDS	136768742	136769767	.	+	2	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 206 1231 +
Chr1	stalkie_big_nohaplotig	CDS	136769866	136770785	.	+	2	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 1232 2151 +
Chr1	stalkie_big_nohaplotig	CDS	136771325	136772249	.	+	0	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 2152 3076 +
Chr1	stalkie_big_nohaplotig	CDS	136772318	136772472	.	+	2	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 3077 3231 +
Chr1	stalkie_big_nohaplotig	CDS	136772614	136772733	.	+	0	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 3232 3351 +
Chr1	stalkie_big_nohaplotig	CDS	136772857	136773047	.	+	0	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 3352 3542 +
Chr1	stalkie_big_nohaplotig	CDS	136773120	136773313	.	+	1	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 3543 3736 +
Chr1	stalkie_big_nohaplotig	CDS	136773713	136773818	.	+	2	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 3737 3842 +
Chr1	stalkie_big_nohaplotig	CDS	136773879	136774106	.	+	1	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 3843 4070 +
Chr1	stalkie_big_nohaplotig	CDS	136774489	136774573	.	+	1	Parent=FBgn0026181.1.mrna1;Target=FBgn0026181.1 4071 4155 +
Chr1	gffcl	locus	136776788	136777447	.	-	.	ID=RLOC_00011555;geneIDs=comp150702_c0_seq1.path1;transcripts=comp150702_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136776788	136777447	.	-	.	ID=comp150702_c0_seq1.mrna1;geneID=comp150702_c0_seq1.path1;Name=comp150702_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=657;mismatches=3;indels=1;unknowns=0;Target=comp150702_c0_seq1 661 1 .;CDS_Target=comp150702_c0_seq1 106 47 .;locus=RLOC_00011555
Chr1	stalkie_big_nohaplotig	exon	136776788	136777447	99	-	.	Parent=comp150702_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	136777343	136777401	.	-	0	Parent=comp150702_c0_seq1.mrna1
Chr1	gffcl	locus	136804526	136806049	.	+	.	ID=RLOC_00011556;geneIDs=FBgn0030763.1.path2;transcripts=FBgn0030763.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	136804526	136806049	.	+	.	ID=FBgn0030763.1.mrna2;geneID=FBgn0030763.1.path2;Name=FBgn0030763.1;Dir=sensecoverage=94.5;identity=100.0;matches=607;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011556
Chr1	stalkie_big_nohaplotig	exon	136804526	136804872	100	+	.	Parent=FBgn0030763.1.mrna2;Target=FBgn0030763.1 36 382 +
Chr1	stalkie_big_nohaplotig	exon	136804950	136805069	100	+	.	Parent=FBgn0030763.1.mrna2;Target=FBgn0030763.1 383 502 +
Chr1	stalkie_big_nohaplotig	exon	136805910	136806049	100	+	.	Parent=FBgn0030763.1.mrna2;Target=FBgn0030763.1 503 642 +
Chr1	stalkie_big_nohaplotig	CDS	136804526	136804872	.	+	2	Parent=FBgn0030763.1.mrna2;Target=FBgn0030763.1 36 382 +
Chr1	stalkie_big_nohaplotig	CDS	136804950	136805069	.	+	0	Parent=FBgn0030763.1.mrna2;Target=FBgn0030763.1 383 502 +
Chr1	stalkie_big_nohaplotig	CDS	136805910	136806049	.	+	0	Parent=FBgn0030763.1.mrna2;Target=FBgn0030763.1 503 642 +
Chr1	gffcl	locus	136848820	136862482	.	+	.	ID=RLOC_00011557;geneIDs=FBgn0003447.1.path1;transcripts=FBgn0003447.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136848820	136862482	.	+	.	ID=FBgn0003447.1.mrna1;geneID=FBgn0003447.1.path1;Name=FBgn0003447.1;Dir=sensecoverage=100.0;identity=99.6;matches=1578;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011557
Chr1	stalkie_big_nohaplotig	exon	136848820	136849069	99	+	.	Parent=FBgn0003447.1.mrna1;Target=FBgn0003447.1 1 250 +
Chr1	stalkie_big_nohaplotig	exon	136860177	136860597	99	+	.	Parent=FBgn0003447.1.mrna1;Target=FBgn0003447.1 251 671 +
Chr1	stalkie_big_nohaplotig	exon	136860820	136860915	100	+	.	Parent=FBgn0003447.1.mrna1;Target=FBgn0003447.1 672 767 +
Chr1	stalkie_big_nohaplotig	exon	136860980	136861453	99	+	.	Parent=FBgn0003447.1.mrna1;Target=FBgn0003447.1 768 1241 +
Chr1	stalkie_big_nohaplotig	exon	136862074	136862322	100	+	.	Parent=FBgn0003447.1.mrna1;Target=FBgn0003447.1 1242 1490 +
Chr1	stalkie_big_nohaplotig	exon	136862389	136862482	100	+	.	Parent=FBgn0003447.1.mrna1;Target=FBgn0003447.1 1491 1584 +
Chr1	stalkie_big_nohaplotig	CDS	136848820	136849069	.	+	0	Parent=FBgn0003447.1.mrna1;Target=FBgn0003447.1 1 250 +
Chr1	stalkie_big_nohaplotig	CDS	136860177	136860597	.	+	2	Parent=FBgn0003447.1.mrna1;Target=FBgn0003447.1 251 671 +
Chr1	stalkie_big_nohaplotig	CDS	136860820	136860915	.	+	1	Parent=FBgn0003447.1.mrna1;Target=FBgn0003447.1 672 767 +
Chr1	stalkie_big_nohaplotig	CDS	136860980	136861453	.	+	1	Parent=FBgn0003447.1.mrna1;Target=FBgn0003447.1 768 1241 +
Chr1	stalkie_big_nohaplotig	CDS	136862074	136862322	.	+	1	Parent=FBgn0003447.1.mrna1;Target=FBgn0003447.1 1242 1490 +
Chr1	stalkie_big_nohaplotig	CDS	136862389	136862482	.	+	1	Parent=FBgn0003447.1.mrna1;Target=FBgn0003447.1 1491 1584 +
Chr1	gffcl	locus	136865324	136874315	.	-	.	ID=RLOC_00011558;geneIDs=FBgn0086450.1.path1;transcripts=FBgn0086450.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136865324	136874315	.	-	.	ID=FBgn0086450.1.mrna1;geneID=FBgn0086450.1.path1;Name=FBgn0086450.1;Dir=sensecoverage=100.0;identity=99.5;matches=3131;mismatches=16;indels=0;unknowns=0;locus=RLOC_00011558
Chr1	stalkie_big_nohaplotig	exon	136865324	136865411	100	-	.	Parent=FBgn0086450.1.mrna1;Target=FBgn0086450.1 3060 3147 +
Chr1	stalkie_big_nohaplotig	exon	136865473	136865630	99	-	.	Parent=FBgn0086450.1.mrna1;Target=FBgn0086450.1 2902 3059 +
Chr1	stalkie_big_nohaplotig	exon	136865692	136865925	100	-	.	Parent=FBgn0086450.1.mrna1;Target=FBgn0086450.1 2668 2901 +
Chr1	stalkie_big_nohaplotig	exon	136865986	136867401	99	-	.	Parent=FBgn0086450.1.mrna1;Target=FBgn0086450.1 1252 2667 +
Chr1	stalkie_big_nohaplotig	exon	136867465	136867869	99	-	.	Parent=FBgn0086450.1.mrna1;Target=FBgn0086450.1 847 1251 +
Chr1	stalkie_big_nohaplotig	exon	136867926	136868263	99	-	.	Parent=FBgn0086450.1.mrna1;Target=FBgn0086450.1 509 846 +
Chr1	stalkie_big_nohaplotig	exon	136868429	136868735	99	-	.	Parent=FBgn0086450.1.mrna1;Target=FBgn0086450.1 202 508 +
Chr1	stalkie_big_nohaplotig	exon	136870425	136870535	98	-	.	Parent=FBgn0086450.1.mrna1;Target=FBgn0086450.1 91 201 +
Chr1	stalkie_big_nohaplotig	exon	136870597	136870668	100	-	.	Parent=FBgn0086450.1.mrna1;Target=FBgn0086450.1 19 90 +
Chr1	stalkie_big_nohaplotig	exon	136874298	136874315	100	-	.	Parent=FBgn0086450.1.mrna1;Target=FBgn0086450.1 1 18 +
Chr1	stalkie_big_nohaplotig	CDS	136865324	136865411	.	-	1	Parent=FBgn0086450.1.mrna1;Target=FBgn0086450.1 3060 3147 +
Chr1	stalkie_big_nohaplotig	CDS	136865473	136865630	.	-	0	Parent=FBgn0086450.1.mrna1;Target=FBgn0086450.1 2902 3059 +
Chr1	stalkie_big_nohaplotig	CDS	136865692	136865925	.	-	0	Parent=FBgn0086450.1.mrna1;Target=FBgn0086450.1 2668 2901 +
Chr1	stalkie_big_nohaplotig	CDS	136865986	136867401	.	-	0	Parent=FBgn0086450.1.mrna1;Target=FBgn0086450.1 1252 2667 +
Chr1	stalkie_big_nohaplotig	CDS	136867465	136867869	.	-	0	Parent=FBgn0086450.1.mrna1;Target=FBgn0086450.1 847 1251 +
Chr1	stalkie_big_nohaplotig	CDS	136867926	136868263	.	-	2	Parent=FBgn0086450.1.mrna1;Target=FBgn0086450.1 509 846 +
Chr1	stalkie_big_nohaplotig	CDS	136868429	136868735	.	-	0	Parent=FBgn0086450.1.mrna1;Target=FBgn0086450.1 202 508 +
Chr1	stalkie_big_nohaplotig	CDS	136870425	136870535	.	-	0	Parent=FBgn0086450.1.mrna1;Target=FBgn0086450.1 91 201 +
Chr1	stalkie_big_nohaplotig	CDS	136870597	136870668	.	-	0	Parent=FBgn0086450.1.mrna1;Target=FBgn0086450.1 19 90 +
Chr1	stalkie_big_nohaplotig	CDS	136874298	136874315	.	-	0	Parent=FBgn0086450.1.mrna1;Target=FBgn0086450.1 1 18 +
Chr1	gffcl	locus	136900329	136900363	.	-	.	ID=RLOC_00011559;geneIDs=FBgn0030763.1.path1;transcripts=FBgn0030763.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136900329	136900363	.	-	.	ID=FBgn0030763.1.mrna1;geneID=FBgn0030763.1.path1;Name=FBgn0030763.1;Dir=indeterminatecoverage=5.5;identity=100.0;matches=35;mismatches=0;indels=0;unknowns=0;Target=FBgn0030763.1 35 1 .;locus=RLOC_00011559
Chr1	stalkie_big_nohaplotig	exon	136900329	136900363	100	-	.	Parent=FBgn0030763.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	136900329	136900363	.	-	0	Parent=FBgn0030763.1.mrna1
Chr1	gffcl	locus	136926580	136927201	.	-	.	ID=RLOC_00011560;geneIDs=comp147099_c0_seq1.path2;transcripts=comp147099_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	136926580	136927201	.	-	.	ID=comp147099_c0_seq1.mrna2;geneID=comp147099_c0_seq1.path2;Name=comp147099_c0_seq1;Dir=indeterminatecoverage=84.7;identity=97.1;matches=612;mismatches=1;indels=17;unknowns=0;Target=comp147099_c0_seq1 733 113 .;CDS_Target=comp147099_c0_seq1 377 243 .;locus=RLOC_00011560
Chr1	stalkie_big_nohaplotig	exon	136926580	136927201	97	-	.	Parent=comp147099_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	136926937	136927071	.	-	0	Parent=comp147099_c0_seq1.mrna2
Chr1	gffcl	locus	136929325	136931143	.	-	.	ID=RLOC_00011561;geneIDs=FBgn0031775.1.path1;transcripts=FBgn0031775.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136929325	136931143	.	-	.	ID=FBgn0031775.1.mrna1;geneID=FBgn0031775.1.path1;Name=FBgn0031775.1;Dir=sensecoverage=100.0;identity=100.0;matches=801;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011561
Chr1	stalkie_big_nohaplotig	exon	136929325	136929363	100	-	.	Parent=FBgn0031775.1.mrna1;Target=FBgn0031775.1 763 801 +
Chr1	stalkie_big_nohaplotig	exon	136929430	136929567	100	-	.	Parent=FBgn0031775.1.mrna1;Target=FBgn0031775.1 625 762 +
Chr1	stalkie_big_nohaplotig	exon	136930356	136930558	100	-	.	Parent=FBgn0031775.1.mrna1;Target=FBgn0031775.1 422 624 +
Chr1	stalkie_big_nohaplotig	exon	136930723	136931143	100	-	.	Parent=FBgn0031775.1.mrna1;Target=FBgn0031775.1 1 421 +
Chr1	stalkie_big_nohaplotig	CDS	136929325	136929363	.	-	0	Parent=FBgn0031775.1.mrna1;Target=FBgn0031775.1 763 801 +
Chr1	stalkie_big_nohaplotig	CDS	136929430	136929567	.	-	0	Parent=FBgn0031775.1.mrna1;Target=FBgn0031775.1 625 762 +
Chr1	stalkie_big_nohaplotig	CDS	136930356	136930558	.	-	2	Parent=FBgn0031775.1.mrna1;Target=FBgn0031775.1 422 624 +
Chr1	stalkie_big_nohaplotig	CDS	136930723	136931143	.	-	0	Parent=FBgn0031775.1.mrna1;Target=FBgn0031775.1 1 421 +
Chr1	gffcl	locus	136931274	136932169	.	+	.	ID=RLOC_00011562;geneIDs=FBgn0036380.1.path1;transcripts=FBgn0036380.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136931274	136932169	.	+	.	ID=FBgn0036380.1.mrna1;geneID=FBgn0036380.1.path1;Name=FBgn0036380.1;Dir=sensecoverage=100.0;identity=99.2;matches=765;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011562
Chr1	stalkie_big_nohaplotig	exon	136931274	136931864	99	+	.	Parent=FBgn0036380.1.mrna1;Target=FBgn0036380.1 1 591 +
Chr1	stalkie_big_nohaplotig	exon	136931926	136932066	99	+	.	Parent=FBgn0036380.1.mrna1;Target=FBgn0036380.1 592 732 +
Chr1	stalkie_big_nohaplotig	exon	136932131	136932169	97	+	.	Parent=FBgn0036380.1.mrna1;Target=FBgn0036380.1 733 771 +
Chr1	stalkie_big_nohaplotig	CDS	136931274	136931864	.	+	0	Parent=FBgn0036380.1.mrna1;Target=FBgn0036380.1 1 591 +
Chr1	stalkie_big_nohaplotig	CDS	136931926	136932066	.	+	0	Parent=FBgn0036380.1.mrna1;Target=FBgn0036380.1 592 732 +
Chr1	stalkie_big_nohaplotig	CDS	136932131	136932169	.	+	0	Parent=FBgn0036380.1.mrna1;Target=FBgn0036380.1 733 771 +
Chr1	gffcl	locus	136933782	136936591	.	-	.	ID=RLOC_00011563;geneIDs=FBgn0024973.1.path1;transcripts=FBgn0024973.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136933782	136936591	.	-	.	ID=FBgn0024973.1.mrna1;geneID=FBgn0024973.1.path1;Name=FBgn0024973.1;Dir=sensecoverage=100.0;identity=99.5;matches=2206;mismatches=11;indels=0;unknowns=0;locus=RLOC_00011563
Chr1	stalkie_big_nohaplotig	exon	136933782	136934826	99	-	.	Parent=FBgn0024973.1.mrna1;Target=FBgn0024973.1 1173 2217 +
Chr1	stalkie_big_nohaplotig	exon	136935124	136935264	99	-	.	Parent=FBgn0024973.1.mrna1;Target=FBgn0024973.1 1032 1172 +
Chr1	stalkie_big_nohaplotig	exon	136935333	136935497	99	-	.	Parent=FBgn0024973.1.mrna1;Target=FBgn0024973.1 867 1031 +
Chr1	stalkie_big_nohaplotig	exon	136935555	136936145	99	-	.	Parent=FBgn0024973.1.mrna1;Target=FBgn0024973.1 276 866 +
Chr1	stalkie_big_nohaplotig	exon	136936201	136936358	100	-	.	Parent=FBgn0024973.1.mrna1;Target=FBgn0024973.1 118 275 +
Chr1	stalkie_big_nohaplotig	exon	136936423	136936503	100	-	.	Parent=FBgn0024973.1.mrna1;Target=FBgn0024973.1 37 117 +
Chr1	stalkie_big_nohaplotig	exon	136936556	136936591	100	-	.	Parent=FBgn0024973.1.mrna1;Target=FBgn0024973.1 1 36 +
Chr1	stalkie_big_nohaplotig	CDS	136933782	136934826	.	-	1	Parent=FBgn0024973.1.mrna1;Target=FBgn0024973.1 1173 2217 +
Chr1	stalkie_big_nohaplotig	CDS	136935124	136935264	.	-	1	Parent=FBgn0024973.1.mrna1;Target=FBgn0024973.1 1032 1172 +
Chr1	stalkie_big_nohaplotig	CDS	136935333	136935497	.	-	1	Parent=FBgn0024973.1.mrna1;Target=FBgn0024973.1 867 1031 +
Chr1	stalkie_big_nohaplotig	CDS	136935555	136936145	.	-	1	Parent=FBgn0024973.1.mrna1;Target=FBgn0024973.1 276 866 +
Chr1	stalkie_big_nohaplotig	CDS	136936201	136936358	.	-	0	Parent=FBgn0024973.1.mrna1;Target=FBgn0024973.1 118 275 +
Chr1	stalkie_big_nohaplotig	CDS	136936423	136936503	.	-	0	Parent=FBgn0024973.1.mrna1;Target=FBgn0024973.1 37 117 +
Chr1	stalkie_big_nohaplotig	CDS	136936556	136936591	.	-	0	Parent=FBgn0024973.1.mrna1;Target=FBgn0024973.1 1 36 +
Chr1	gffcl	locus	136937795	136938176	.	-	.	ID=RLOC_00011564;geneIDs=comp143839_c0_seq1.path1;transcripts=comp143839_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136937795	136938176	.	-	.	ID=comp143839_c0_seq1.mrna1;geneID=comp143839_c0_seq1.path1;Name=comp143839_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=377;mismatches=5;indels=0;unknowns=0;Target=comp143839_c0_seq1 382 1 .;CDS_Target=comp143839_c0_seq1 79 2 .;locus=RLOC_00011564
Chr1	stalkie_big_nohaplotig	exon	136937795	136938176	98	-	.	Parent=comp143839_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	136938098	136938175	.	-	0	Parent=comp143839_c0_seq1.mrna1
Chr1	gffcl	locus	136938234	136939677	.	+	.	ID=RLOC_00011565;geneIDs=FBgn0024994.1.path1;transcripts=FBgn0024994.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136938234	136939677	.	+	.	ID=FBgn0024994.1.mrna1;geneID=FBgn0024994.1.path1;Name=FBgn0024994.1;Dir=sensecoverage=95.5;identity=99.9;matches=1030;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011565
Chr1	stalkie_big_nohaplotig	exon	136938234	136938353	99	+	.	Parent=FBgn0024994.1.mrna1;Target=FBgn0024994.1 50 169 +
Chr1	stalkie_big_nohaplotig	exon	136938767	136939677	100	+	.	Parent=FBgn0024994.1.mrna1;Target=FBgn0024994.1 170 1080 +
Chr1	stalkie_big_nohaplotig	CDS	136938236	136938353	.	+	0	Parent=FBgn0024994.1.mrna1;Target=FBgn0024994.1 52 169 +
Chr1	stalkie_big_nohaplotig	CDS	136938767	136939677	.	+	2	Parent=FBgn0024994.1.mrna1;Target=FBgn0024994.1 170 1080 +
Chr1	gffcl	locus	136940094	136941664	.	-	.	ID=RLOC_00011566;geneIDs=FBgn0024993.1.path1;transcripts=FBgn0024993.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136940094	136941664	.	-	.	ID=FBgn0024993.1.mrna1;geneID=FBgn0024993.1.path1;Name=FBgn0024993.1;Dir=sensecoverage=100.0;identity=99.9;matches=1208;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011566
Chr1	stalkie_big_nohaplotig	exon	136940094	136940732	99	-	.	Parent=FBgn0024993.1.mrna1;Target=FBgn0024993.1 571 1209 +
Chr1	stalkie_big_nohaplotig	exon	136940792	136940925	100	-	.	Parent=FBgn0024993.1.mrna1;Target=FBgn0024993.1 437 570 +
Chr1	stalkie_big_nohaplotig	exon	136940992	136941289	100	-	.	Parent=FBgn0024993.1.mrna1;Target=FBgn0024993.1 139 436 +
Chr1	stalkie_big_nohaplotig	exon	136941342	136941440	100	-	.	Parent=FBgn0024993.1.mrna1;Target=FBgn0024993.1 40 138 +
Chr1	stalkie_big_nohaplotig	exon	136941626	136941664	100	-	.	Parent=FBgn0024993.1.mrna1;Target=FBgn0024993.1 1 39 +
Chr1	stalkie_big_nohaplotig	CDS	136940094	136940732	.	-	0	Parent=FBgn0024993.1.mrna1;Target=FBgn0024993.1 571 1209 +
Chr1	stalkie_big_nohaplotig	CDS	136940792	136940925	.	-	2	Parent=FBgn0024993.1.mrna1;Target=FBgn0024993.1 437 570 +
Chr1	stalkie_big_nohaplotig	CDS	136940992	136941289	.	-	0	Parent=FBgn0024993.1.mrna1;Target=FBgn0024993.1 139 436 +
Chr1	stalkie_big_nohaplotig	CDS	136941342	136941440	.	-	0	Parent=FBgn0024993.1.mrna1;Target=FBgn0024993.1 40 138 +
Chr1	stalkie_big_nohaplotig	CDS	136941626	136941664	.	-	0	Parent=FBgn0024993.1.mrna1;Target=FBgn0024993.1 1 39 +
Chr1	gffcl	locus	136944745	136946994	.	-	.	ID=RLOC_00011567;geneIDs=FBgn0027564.1.path1;transcripts=FBgn0027564.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136944745	136946994	.	-	.	ID=FBgn0027564.1.mrna1;geneID=FBgn0027564.1.path1;Name=FBgn0027564.1;Dir=sensecoverage=100.0;identity=99.8;matches=1719;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011567
Chr1	stalkie_big_nohaplotig	exon	136944745	136944879	100	-	.	Parent=FBgn0027564.1.mrna1;Target=FBgn0027564.1 1588 1722 +
Chr1	stalkie_big_nohaplotig	exon	136944941	136945061	100	-	.	Parent=FBgn0027564.1.mrna1;Target=FBgn0027564.1 1467 1587 +
Chr1	stalkie_big_nohaplotig	exon	136945115	136945497	99	-	.	Parent=FBgn0027564.1.mrna1;Target=FBgn0027564.1 1084 1466 +
Chr1	stalkie_big_nohaplotig	exon	136945554	136945817	100	-	.	Parent=FBgn0027564.1.mrna1;Target=FBgn0027564.1 820 1083 +
Chr1	stalkie_big_nohaplotig	exon	136946059	136946566	99	-	.	Parent=FBgn0027564.1.mrna1;Target=FBgn0027564.1 312 819 +
Chr1	stalkie_big_nohaplotig	exon	136946627	136946841	100	-	.	Parent=FBgn0027564.1.mrna1;Target=FBgn0027564.1 97 311 +
Chr1	stalkie_big_nohaplotig	exon	136946899	136946994	100	-	.	Parent=FBgn0027564.1.mrna1;Target=FBgn0027564.1 1 96 +
Chr1	stalkie_big_nohaplotig	CDS	136944745	136944879	.	-	0	Parent=FBgn0027564.1.mrna1;Target=FBgn0027564.1 1588 1722 +
Chr1	stalkie_big_nohaplotig	CDS	136944941	136945061	.	-	1	Parent=FBgn0027564.1.mrna1;Target=FBgn0027564.1 1467 1587 +
Chr1	stalkie_big_nohaplotig	CDS	136945115	136945497	.	-	0	Parent=FBgn0027564.1.mrna1;Target=FBgn0027564.1 1084 1466 +
Chr1	stalkie_big_nohaplotig	CDS	136945554	136945817	.	-	0	Parent=FBgn0027564.1.mrna1;Target=FBgn0027564.1 820 1083 +
Chr1	stalkie_big_nohaplotig	CDS	136946059	136946566	.	-	1	Parent=FBgn0027564.1.mrna1;Target=FBgn0027564.1 312 819 +
Chr1	stalkie_big_nohaplotig	CDS	136946627	136946841	.	-	0	Parent=FBgn0027564.1.mrna1;Target=FBgn0027564.1 97 311 +
Chr1	stalkie_big_nohaplotig	CDS	136946899	136946994	.	-	0	Parent=FBgn0027564.1.mrna1;Target=FBgn0027564.1 1 96 +
Chr1	gffcl	locus	136947357	136948801	.	+	.	ID=RLOC_00011568;geneIDs=ORF1056.path1;transcripts=ORF1056.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136947357	136948801	.	+	.	ID=ORF1056.mrna1;geneID=ORF1056.path1;Name=ORF1056;Dir=sensecoverage=100.0;identity=99.6;matches=1255;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011568
Chr1	stalkie_big_nohaplotig	exon	136947357	136947524	100	+	.	Parent=ORF1056.mrna1;Target=ORF1056 1 168 +
Chr1	stalkie_big_nohaplotig	exon	136947602	136947817	100	+	.	Parent=ORF1056.mrna1;Target=ORF1056 169 384 +
Chr1	stalkie_big_nohaplotig	exon	136947872	136948087	99	+	.	Parent=ORF1056.mrna1;Target=ORF1056 385 600 +
Chr1	stalkie_big_nohaplotig	exon	136948142	136948801	99	+	.	Parent=ORF1056.mrna1;Target=ORF1056 601 1260 +
Chr1	stalkie_big_nohaplotig	CDS	136947357	136947524	.	+	0	Parent=ORF1056.mrna1;Target=ORF1056 1 168 +
Chr1	stalkie_big_nohaplotig	CDS	136947602	136947817	.	+	0	Parent=ORF1056.mrna1;Target=ORF1056 169 384 +
Chr1	stalkie_big_nohaplotig	CDS	136947872	136948087	.	+	0	Parent=ORF1056.mrna1;Target=ORF1056 385 600 +
Chr1	stalkie_big_nohaplotig	CDS	136948142	136948801	.	+	0	Parent=ORF1056.mrna1;Target=ORF1056 601 1260 +
Chr1	gffcl	locus	136949273	136953324	.	-	.	ID=RLOC_00011569;geneIDs=FBgn0023515.1.path1;transcripts=FBgn0023515.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136949273	136953324	.	-	.	ID=FBgn0023515.1.mrna1;geneID=FBgn0023515.1.path1;Name=FBgn0023515.1;Dir=sensecoverage=100.0;identity=99.4;matches=3512;mismatches=19;indels=3;unknowns=0;locus=RLOC_00011569
Chr1	stalkie_big_nohaplotig	exon	136949273	136949528	99	-	.	Parent=FBgn0023515.1.mrna1;Target=FBgn0023515.1 3279 3534 +
Chr1	stalkie_big_nohaplotig	exon	136949585	136949692	100	-	.	Parent=FBgn0023515.1.mrna1;Target=FBgn0023515.1 3171 3278 +
Chr1	stalkie_big_nohaplotig	exon	136949774	136949923	100	-	.	Parent=FBgn0023515.1.mrna1;Target=FBgn0023515.1 3021 3170 +
Chr1	stalkie_big_nohaplotig	exon	136949983	136950175	100	-	.	Parent=FBgn0023515.1.mrna1;Target=FBgn0023515.1 2828 3020 +
Chr1	stalkie_big_nohaplotig	exon	136950239	136950376	100	-	.	Parent=FBgn0023515.1.mrna1;Target=FBgn0023515.1 2690 2827 +
Chr1	stalkie_big_nohaplotig	exon	136950440	136950730	99	-	.	Parent=FBgn0023515.1.mrna1;Target=FBgn0023515.1 2399 2689 +
Chr1	stalkie_big_nohaplotig	exon	136950784	136951269	99	-	.	Parent=FBgn0023515.1.mrna1;Target=FBgn0023515.1 1913 2398 +
Chr1	stalkie_big_nohaplotig	exon	136951345	136953156	99	-	.	Parent=FBgn0023515.1.mrna1;Target=FBgn0023515.1 98 1912 +
Chr1	stalkie_big_nohaplotig	exon	136953228	136953324	98	-	.	Parent=FBgn0023515.1.mrna1;Target=FBgn0023515.1 1 97 +
Chr1	stalkie_big_nohaplotig	CDS	136949273	136949528	.	-	1	Parent=FBgn0023515.1.mrna1;Target=FBgn0023515.1 3279 3534 +
Chr1	stalkie_big_nohaplotig	CDS	136949585	136949692	.	-	1	Parent=FBgn0023515.1.mrna1;Target=FBgn0023515.1 3171 3278 +
Chr1	stalkie_big_nohaplotig	CDS	136949774	136949923	.	-	1	Parent=FBgn0023515.1.mrna1;Target=FBgn0023515.1 3021 3170 +
Chr1	stalkie_big_nohaplotig	CDS	136949983	136950175	.	-	2	Parent=FBgn0023515.1.mrna1;Target=FBgn0023515.1 2828 3020 +
Chr1	stalkie_big_nohaplotig	CDS	136950239	136950376	.	-	2	Parent=FBgn0023515.1.mrna1;Target=FBgn0023515.1 2690 2827 +
Chr1	stalkie_big_nohaplotig	CDS	136950440	136950730	.	-	2	Parent=FBgn0023515.1.mrna1;Target=FBgn0023515.1 2399 2689 +
Chr1	stalkie_big_nohaplotig	CDS	136950784	136951269	.	-	2	Parent=FBgn0023515.1.mrna1;Target=FBgn0023515.1 1913 2398 +
Chr1	stalkie_big_nohaplotig	CDS	136951345	136953156	.	-	2	Parent=FBgn0023515.1.mrna1;Target=FBgn0023515.1 98 1912 +
Chr1	stalkie_big_nohaplotig	CDS	136953228	136953324	.	-	0	Parent=FBgn0023515.1.mrna1;Target=FBgn0023515.1 1 97 +
Chr1	gffcl	locus	136954627	136956575	.	+	.	ID=RLOC_00011570;geneIDs=FBgn0024998.1.path1;transcripts=FBgn0024998.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136954627	136956575	.	+	.	ID=FBgn0024998.1.mrna1;geneID=FBgn0024998.1.path1;Name=FBgn0024998.1;Dir=sensecoverage=100.0;identity=99.4;matches=1565;mismatches=10;indels=0;unknowns=0;locus=RLOC_00011570
Chr1	stalkie_big_nohaplotig	exon	136954627	136954705	98	+	.	Parent=FBgn0024998.1.mrna1;Target=FBgn0024998.1 1 79 +
Chr1	stalkie_big_nohaplotig	exon	136954765	136954890	100	+	.	Parent=FBgn0024998.1.mrna1;Target=FBgn0024998.1 80 205 +
Chr1	stalkie_big_nohaplotig	exon	136954971	136955068	97	+	.	Parent=FBgn0024998.1.mrna1;Target=FBgn0024998.1 206 303 +
Chr1	stalkie_big_nohaplotig	exon	136955127	136955276	99	+	.	Parent=FBgn0024998.1.mrna1;Target=FBgn0024998.1 304 453 +
Chr1	stalkie_big_nohaplotig	exon	136955331	136955459	100	+	.	Parent=FBgn0024998.1.mrna1;Target=FBgn0024998.1 454 582 +
Chr1	stalkie_big_nohaplotig	exon	136955517	136956322	99	+	.	Parent=FBgn0024998.1.mrna1;Target=FBgn0024998.1 583 1388 +
Chr1	stalkie_big_nohaplotig	exon	136956389	136956575	100	+	.	Parent=FBgn0024998.1.mrna1;Target=FBgn0024998.1 1389 1575 +
Chr1	stalkie_big_nohaplotig	CDS	136954627	136954705	.	+	0	Parent=FBgn0024998.1.mrna1;Target=FBgn0024998.1 1 79 +
Chr1	stalkie_big_nohaplotig	CDS	136954765	136954890	.	+	2	Parent=FBgn0024998.1.mrna1;Target=FBgn0024998.1 80 205 +
Chr1	stalkie_big_nohaplotig	CDS	136954971	136955068	.	+	2	Parent=FBgn0024998.1.mrna1;Target=FBgn0024998.1 206 303 +
Chr1	stalkie_big_nohaplotig	CDS	136955127	136955276	.	+	0	Parent=FBgn0024998.1.mrna1;Target=FBgn0024998.1 304 453 +
Chr1	stalkie_big_nohaplotig	CDS	136955331	136955459	.	+	0	Parent=FBgn0024998.1.mrna1;Target=FBgn0024998.1 454 582 +
Chr1	stalkie_big_nohaplotig	CDS	136955517	136956322	.	+	0	Parent=FBgn0024998.1.mrna1;Target=FBgn0024998.1 583 1388 +
Chr1	stalkie_big_nohaplotig	CDS	136956389	136956575	.	+	1	Parent=FBgn0024998.1.mrna1;Target=FBgn0024998.1 1389 1575 +
Chr1	gffcl	locus	136964138	136965654	.	-	.	ID=RLOC_00011572;geneIDs=FBgn0031145.1.path1,FBgn0031145.2.path1;transcripts=FBgn0031145.2.mrna1,FBgn0031145.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136964138	136965654	.	-	.	ID=FBgn0031145.2.mrna1;geneID=FBgn0031145.2.path1;Name=FBgn0031145.2;Dir=sensecoverage=100.0;identity=100.0;matches=396;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011572
Chr1	stalkie_big_nohaplotig	exon	136964138	136964248	100	-	.	Parent=FBgn0031145.2.mrna1;Target=FBgn0031145.2 286 396 +
Chr1	stalkie_big_nohaplotig	exon	136965088	136965186	100	-	.	Parent=FBgn0031145.2.mrna1;Target=FBgn0031145.2 187 285 +
Chr1	stalkie_big_nohaplotig	exon	136965244	136965315	100	-	.	Parent=FBgn0031145.2.mrna1;Target=FBgn0031145.2 115 186 +
Chr1	stalkie_big_nohaplotig	exon	136965541	136965654	100	-	.	Parent=FBgn0031145.2.mrna1;Target=FBgn0031145.2 1 114 +
Chr1	stalkie_big_nohaplotig	CDS	136964138	136964248	.	-	0	Parent=FBgn0031145.2.mrna1;Target=FBgn0031145.2 286 396 +
Chr1	stalkie_big_nohaplotig	CDS	136965088	136965186	.	-	0	Parent=FBgn0031145.2.mrna1;Target=FBgn0031145.2 187 285 +
Chr1	stalkie_big_nohaplotig	CDS	136965244	136965315	.	-	0	Parent=FBgn0031145.2.mrna1;Target=FBgn0031145.2 115 186 +
Chr1	stalkie_big_nohaplotig	CDS	136965541	136965654	.	-	0	Parent=FBgn0031145.2.mrna1;Target=FBgn0031145.2 1 114 +
Chr1	stalkie_big_nohaplotig	mRNA	136964858	136965654	.	-	.	ID=FBgn0031145.1.mrna1;geneID=FBgn0031145.1.path1;Name=FBgn0031145.1;Dir=sensecoverage=100.0;identity=100.0;matches=393;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011572
Chr1	stalkie_big_nohaplotig	exon	136964858	136964965	100	-	.	Parent=FBgn0031145.1.mrna1;Target=FBgn0031145.1 286 393 +
Chr1	stalkie_big_nohaplotig	exon	136965088	136965186	100	-	.	Parent=FBgn0031145.1.mrna1;Target=FBgn0031145.1 187 285 +
Chr1	stalkie_big_nohaplotig	exon	136965244	136965315	100	-	.	Parent=FBgn0031145.1.mrna1;Target=FBgn0031145.1 115 186 +
Chr1	stalkie_big_nohaplotig	exon	136965541	136965654	100	-	.	Parent=FBgn0031145.1.mrna1;Target=FBgn0031145.1 1 114 +
Chr1	stalkie_big_nohaplotig	CDS	136964858	136964965	.	-	0	Parent=FBgn0031145.1.mrna1;Target=FBgn0031145.1 286 393 +
Chr1	stalkie_big_nohaplotig	CDS	136965088	136965186	.	-	0	Parent=FBgn0031145.1.mrna1;Target=FBgn0031145.1 187 285 +
Chr1	stalkie_big_nohaplotig	CDS	136965244	136965315	.	-	0	Parent=FBgn0031145.1.mrna1;Target=FBgn0031145.1 115 186 +
Chr1	stalkie_big_nohaplotig	CDS	136965541	136965654	.	-	0	Parent=FBgn0031145.1.mrna1;Target=FBgn0031145.1 1 114 +
Chr1	gffcl	locus	136966981	136967994	.	+	.	ID=RLOC_00011573;geneIDs=FBgn0031267.1.path1;transcripts=FBgn0031267.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136966981	136967994	.	+	.	ID=FBgn0031267.1.mrna1;geneID=FBgn0031267.1.path1;Name=FBgn0031267.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1013;mismatches=1;indels=0;unknowns=0;Target=FBgn0031267.1 1014 1 .;locus=RLOC_00011573
Chr1	stalkie_big_nohaplotig	exon	136966981	136967994	99	+	.	Parent=FBgn0031267.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	136966981	136967994	.	+	0	Parent=FBgn0031267.1.mrna1
Chr1	gffcl	locus	136968503	136972894	.	-	.	ID=RLOC_00011574;geneIDs=FBgn0031266.1.path1;transcripts=FBgn0031266.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136968503	136972894	.	-	.	ID=FBgn0031266.1.mrna1;geneID=FBgn0031266.1.path1;Name=FBgn0031266.1;Dir=sensecoverage=100.0;identity=99.7;matches=4006;mismatches=14;indels=0;unknowns=0;locus=RLOC_00011574
Chr1	stalkie_big_nohaplotig	exon	136968503	136971781	99	-	.	Parent=FBgn0031266.1.mrna1;Target=FBgn0031266.1 742 4020 +
Chr1	stalkie_big_nohaplotig	exon	136971843	136972022	99	-	.	Parent=FBgn0031266.1.mrna1;Target=FBgn0031266.1 562 741 +
Chr1	stalkie_big_nohaplotig	exon	136972079	136972158	100	-	.	Parent=FBgn0031266.1.mrna1;Target=FBgn0031266.1 482 561 +
Chr1	stalkie_big_nohaplotig	exon	136972210	136972336	100	-	.	Parent=FBgn0031266.1.mrna1;Target=FBgn0031266.1 355 481 +
Chr1	stalkie_big_nohaplotig	exon	136972398	136972669	99	-	.	Parent=FBgn0031266.1.mrna1;Target=FBgn0031266.1 83 354 +
Chr1	stalkie_big_nohaplotig	exon	136972813	136972894	100	-	.	Parent=FBgn0031266.1.mrna1;Target=FBgn0031266.1 1 82 +
Chr1	stalkie_big_nohaplotig	CDS	136968503	136971781	.	-	0	Parent=FBgn0031266.1.mrna1;Target=FBgn0031266.1 742 4020 +
Chr1	stalkie_big_nohaplotig	CDS	136971843	136972022	.	-	0	Parent=FBgn0031266.1.mrna1;Target=FBgn0031266.1 562 741 +
Chr1	stalkie_big_nohaplotig	CDS	136972079	136972158	.	-	2	Parent=FBgn0031266.1.mrna1;Target=FBgn0031266.1 482 561 +
Chr1	stalkie_big_nohaplotig	CDS	136972210	136972336	.	-	0	Parent=FBgn0031266.1.mrna1;Target=FBgn0031266.1 355 481 +
Chr1	stalkie_big_nohaplotig	CDS	136972398	136972669	.	-	2	Parent=FBgn0031266.1.mrna1;Target=FBgn0031266.1 83 354 +
Chr1	stalkie_big_nohaplotig	CDS	136972813	136972894	.	-	0	Parent=FBgn0031266.1.mrna1;Target=FBgn0031266.1 1 82 +
Chr1	gffcl	locus	136974004	136975418	.	+	.	ID=RLOC_00011575;geneIDs=FBgn0014868.1.path1;transcripts=FBgn0014868.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136974004	136975418	.	+	.	ID=FBgn0014868.1.mrna1;geneID=FBgn0014868.1.path1;Name=FBgn0014868.1;Dir=sensecoverage=100.0;identity=99.6;matches=1348;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011575
Chr1	stalkie_big_nohaplotig	exon	136974004	136974148	100	+	.	Parent=FBgn0014868.1.mrna1;Target=FBgn0014868.1 1 145 +
Chr1	stalkie_big_nohaplotig	exon	136974211	136975418	99	+	.	Parent=FBgn0014868.1.mrna1;Target=FBgn0014868.1 146 1353 +
Chr1	stalkie_big_nohaplotig	CDS	136974004	136974148	.	+	0	Parent=FBgn0014868.1.mrna1;Target=FBgn0014868.1 1 145 +
Chr1	stalkie_big_nohaplotig	CDS	136974211	136975418	.	+	2	Parent=FBgn0014868.1.mrna1;Target=FBgn0014868.1 146 1353 +
Chr1	gffcl	locus	136975507	136975867	.	-	.	ID=RLOC_00011576;geneIDs=comp147555_c0_seq1.path1;transcripts=comp147555_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136975507	136975867	.	-	.	ID=comp147555_c0_seq1.mrna1;geneID=comp147555_c0_seq1.path1;Name=comp147555_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=358;mismatches=1;indels=2;unknowns=0;Target=comp147555_c0_seq1 359 1 .;CDS_Target=comp147555_c0_seq1 172 29 .;locus=RLOC_00011576
Chr1	stalkie_big_nohaplotig	exon	136975507	136975867	99	-	.	Parent=comp147555_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	136975696	136975839	.	-	0	Parent=comp147555_c0_seq1.mrna1
Chr1	gffcl	locus	136976059	136977169	.	-	.	ID=RLOC_00011577;geneIDs=FBgn0015789.2.path1;transcripts=FBgn0015789.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136976059	136977169	.	-	.	ID=FBgn0015789.2.mrna1;geneID=FBgn0015789.2.path1;Name=FBgn0015789.2;Dir=sensecoverage=100.0;identity=100.0;matches=654;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011577
Chr1	stalkie_big_nohaplotig	exon	136976059	136976253	100	-	.	Parent=FBgn0015789.2.mrna1;Target=FBgn0015789.2 460 654 +
Chr1	stalkie_big_nohaplotig	exon	136976315	136976404	100	-	.	Parent=FBgn0015789.2.mrna1;Target=FBgn0015789.2 370 459 +
Chr1	stalkie_big_nohaplotig	exon	136976455	136976654	100	-	.	Parent=FBgn0015789.2.mrna1;Target=FBgn0015789.2 170 369 +
Chr1	stalkie_big_nohaplotig	exon	136977001	136977169	100	-	.	Parent=FBgn0015789.2.mrna1;Target=FBgn0015789.2 1 169 +
Chr1	stalkie_big_nohaplotig	CDS	136976059	136976253	.	-	0	Parent=FBgn0015789.2.mrna1;Target=FBgn0015789.2 460 654 +
Chr1	stalkie_big_nohaplotig	CDS	136976315	136976404	.	-	0	Parent=FBgn0015789.2.mrna1;Target=FBgn0015789.2 370 459 +
Chr1	stalkie_big_nohaplotig	CDS	136976455	136976654	.	-	2	Parent=FBgn0015789.2.mrna1;Target=FBgn0015789.2 170 369 +
Chr1	stalkie_big_nohaplotig	CDS	136977001	136977169	.	-	0	Parent=FBgn0015789.2.mrna1;Target=FBgn0015789.2 1 169 +
Chr1	gffcl	locus	136978739	136992136	.	.	.	ID=RLOC_00011578;geneIDs=FBgn0030699.1.path1,comp160130_c0_seq1.path1;transcripts=FBgn0030699.1.mrna1,comp160130_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136978739	136992136	.	+	.	ID=FBgn0030699.1.mrna1;geneID=FBgn0030699.1.path1;Name=FBgn0030699.1;Dir=sensecoverage=100.0;identity=99.8;matches=1209;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011578
Chr1	stalkie_big_nohaplotig	exon	136978739	136978840	100	+	.	Parent=FBgn0030699.1.mrna1;Target=FBgn0030699.1 1 102 +
Chr1	stalkie_big_nohaplotig	exon	136987880	136988176	99	+	.	Parent=FBgn0030699.1.mrna1;Target=FBgn0030699.1 103 399 +
Chr1	stalkie_big_nohaplotig	exon	136988239	136988602	99	+	.	Parent=FBgn0030699.1.mrna1;Target=FBgn0030699.1 400 763 +
Chr1	stalkie_big_nohaplotig	exon	136988664	136988819	100	+	.	Parent=FBgn0030699.1.mrna1;Target=FBgn0030699.1 764 919 +
Chr1	stalkie_big_nohaplotig	exon	136988941	136989125	100	+	.	Parent=FBgn0030699.1.mrna1;Target=FBgn0030699.1 920 1104 +
Chr1	stalkie_big_nohaplotig	exon	136992029	136992136	100	+	.	Parent=FBgn0030699.1.mrna1;Target=FBgn0030699.1 1105 1212 +
Chr1	stalkie_big_nohaplotig	CDS	136978739	136978840	.	+	0	Parent=FBgn0030699.1.mrna1;Target=FBgn0030699.1 1 102 +
Chr1	stalkie_big_nohaplotig	CDS	136987880	136988176	.	+	0	Parent=FBgn0030699.1.mrna1;Target=FBgn0030699.1 103 399 +
Chr1	stalkie_big_nohaplotig	CDS	136988239	136988602	.	+	0	Parent=FBgn0030699.1.mrna1;Target=FBgn0030699.1 400 763 +
Chr1	stalkie_big_nohaplotig	CDS	136988664	136988819	.	+	2	Parent=FBgn0030699.1.mrna1;Target=FBgn0030699.1 764 919 +
Chr1	stalkie_big_nohaplotig	CDS	136988941	136989125	.	+	2	Parent=FBgn0030699.1.mrna1;Target=FBgn0030699.1 920 1104 +
Chr1	stalkie_big_nohaplotig	CDS	136992029	136992136	.	+	0	Parent=FBgn0030699.1.mrna1;Target=FBgn0030699.1 1105 1212 +
Chr1	stalkie_big_nohaplotig	mRNA	136989102	136990464	.	-	.	ID=comp160130_c0_seq1.mrna1;geneID=comp160130_c0_seq1.path1;Name=comp160130_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.4;matches=1321;mismatches=42;indels=21;unknowns=0;Target=comp160130_c0_seq1 1384 1 .;CDS_Target=comp160130_c0_seq1 410 246 .;locus=RLOC_00011578
Chr1	stalkie_big_nohaplotig	exon	136989102	136990464	95	-	.	Parent=comp160130_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	136990060	136990219	.	-	0	Parent=comp160130_c0_seq1.mrna1
Chr1	gffcl	locus	136991158	136992050	.	-	.	ID=RLOC_00011579;geneIDs=comp155112_c0_seq1.path1;transcripts=comp155112_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136991158	136992050	.	-	.	ID=comp155112_c0_seq1.mrna1;geneID=comp155112_c0_seq1.path1;Name=comp155112_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.0;matches=808;mismatches=19;indels=6;unknowns=0;Target=comp155112_c0_seq1 666 568 .;locus=RLOC_00011579
Chr1	stalkie_big_nohaplotig	exon	136991158	136991774	96	-	.	Parent=comp155112_c0_seq1.mrna1;Target=comp155112_c0_seq1 827 217 .
Chr1	stalkie_big_nohaplotig	exon	136991835	136992050	98	-	.	Parent=comp155112_c0_seq1.mrna1;Target=comp155112_c0_seq1 216 1 .
Chr1	stalkie_big_nohaplotig	CDS	136991324	136991423	.	-	0	Parent=comp155112_c0_seq1.mrna1
Chr1	gffcl	locus	136996202	136996790	.	+	.	ID=RLOC_00011580;geneIDs=FBgn0001091.path1;transcripts=FBgn0001091.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	136996202	136996790	.	+	.	ID=FBgn0001091.mrna1;geneID=FBgn0001091.path1;Name=FBgn0001091;Dir=indeterminatecoverage=99.8;identity=99.7;matches=588;mismatches=1;indels=1;unknowns=0;Target=FBgn0001091 591 2 .;CDS_Target=FBgn0001091 591 4 .;locus=RLOC_00011580
Chr1	stalkie_big_nohaplotig	exon	136996202	136996790	99	+	.	Parent=FBgn0001091.mrna1
Chr1	stalkie_big_nohaplotig	CDS	136996204	136996790	.	+	0	Parent=FBgn0001091.mrna1
Chr1	gffcl	locus	137000473	137001303	.	-	.	ID=RLOC_00011581;geneIDs=comp145648_c0_seq1.path1;transcripts=comp145648_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137000473	137001303	.	-	.	ID=comp145648_c0_seq1.mrna1;geneID=comp145648_c0_seq1.path1;Name=comp145648_c0_seq1;Dir=antisensecoverage=97.2;identity=99.4;matches=768;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011581
Chr1	stalkie_big_nohaplotig	exon	137000473	137000881	99	-	.	Parent=comp145648_c0_seq1.mrna1;Target=comp145648_c0_seq1 23 431 -
Chr1	stalkie_big_nohaplotig	exon	137000940	137001303	98	-	.	Parent=comp145648_c0_seq1.mrna1;Target=comp145648_c0_seq1 432 795 -
Chr1	stalkie_big_nohaplotig	CDS	137000720	137000881	.	-	0	Parent=comp145648_c0_seq1.mrna1;Target=comp145648_c0_seq1 270 431 .
Chr1	stalkie_big_nohaplotig	CDS	137000940	137001170	.	-	0	Parent=comp145648_c0_seq1.mrna1;Target=comp145648_c0_seq1 432 662 .
Chr1	gffcl	locus	137001530	137002657	.	+	.	ID=RLOC_00011582;geneIDs=FBgn0065035.1.path1;transcripts=FBgn0065035.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137001530	137002657	.	+	.	ID=FBgn0065035.1.mrna1;geneID=FBgn0065035.1.path1;Name=FBgn0065035.1;Dir=sensecoverage=100.0;identity=99.4;matches=1011;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011582
Chr1	stalkie_big_nohaplotig	exon	137001530	137001631	99	+	.	Parent=FBgn0065035.1.mrna1;Target=FBgn0065035.1 1 102 +
Chr1	stalkie_big_nohaplotig	exon	137001688	137002226	99	+	.	Parent=FBgn0065035.1.mrna1;Target=FBgn0065035.1 103 641 +
Chr1	stalkie_big_nohaplotig	exon	137002282	137002657	100	+	.	Parent=FBgn0065035.1.mrna1;Target=FBgn0065035.1 642 1017 +
Chr1	stalkie_big_nohaplotig	CDS	137001530	137001631	.	+	0	Parent=FBgn0065035.1.mrna1;Target=FBgn0065035.1 1 102 +
Chr1	stalkie_big_nohaplotig	CDS	137001688	137002226	.	+	0	Parent=FBgn0065035.1.mrna1;Target=FBgn0065035.1 103 641 +
Chr1	stalkie_big_nohaplotig	CDS	137002282	137002657	.	+	1	Parent=FBgn0065035.1.mrna1;Target=FBgn0065035.1 642 1017 +
Chr1	gffcl	locus	137003605	137028244	.	-	.	ID=RLOC_00011583;geneIDs=FBgn0260938.1.path1,comp155767_c0_seq1.path1;transcripts=comp155767_c0_seq1.mrna1,FBgn0260938.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137003605	137028244	.	-	.	ID=comp155767_c0_seq1.mrna1;geneID=comp155767_c0_seq1.path1;Name=comp155767_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=6615;mismatches=12;indels=0;unknowns=0;locus=RLOC_00011583
Chr1	stalkie_big_nohaplotig	exon	137003605	137005254	99	-	.	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 3 1652 -
Chr1	stalkie_big_nohaplotig	exon	137005310	137005427	100	-	.	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 1653 1770 -
Chr1	stalkie_big_nohaplotig	exon	137005525	137005885	99	-	.	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 1771 2131 -
Chr1	stalkie_big_nohaplotig	exon	137006335	137006403	100	-	.	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 2132 2200 -
Chr1	stalkie_big_nohaplotig	exon	137006664	137007058	99	-	.	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 2201 2595 -
Chr1	stalkie_big_nohaplotig	exon	137007298	137007659	100	-	.	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 2596 2957 -
Chr1	stalkie_big_nohaplotig	exon	137007719	137007937	100	-	.	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 2958 3176 -
Chr1	stalkie_big_nohaplotig	exon	137007997	137009447	99	-	.	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 3177 4627 -
Chr1	stalkie_big_nohaplotig	exon	137009512	137009916	100	-	.	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 4628 5032 -
Chr1	stalkie_big_nohaplotig	exon	137026172	137026198	100	-	.	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 5033 5059 -
Chr1	stalkie_big_nohaplotig	exon	137026262	137026303	100	-	.	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 5060 5101 -
Chr1	stalkie_big_nohaplotig	exon	137026511	137026642	100	-	.	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 5102 5233 -
Chr1	stalkie_big_nohaplotig	exon	137026716	137027504	99	-	.	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 5234 6022 -
Chr1	stalkie_big_nohaplotig	exon	137027638	137028244	99	-	.	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 6023 6629 -
Chr1	stalkie_big_nohaplotig	CDS	137004180	137005254	.	-	1	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 578 1652 .
Chr1	stalkie_big_nohaplotig	CDS	137005310	137005427	.	-	2	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 1653 1770 .
Chr1	stalkie_big_nohaplotig	CDS	137005525	137005885	.	-	0	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 1771 2131 .
Chr1	stalkie_big_nohaplotig	CDS	137006335	137006403	.	-	0	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 2132 2200 .
Chr1	stalkie_big_nohaplotig	CDS	137006664	137007058	.	-	2	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 2201 2595 .
Chr1	stalkie_big_nohaplotig	CDS	137007298	137007659	.	-	1	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 2596 2957 .
Chr1	stalkie_big_nohaplotig	CDS	137007719	137007937	.	-	1	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 2958 3176 .
Chr1	stalkie_big_nohaplotig	CDS	137007997	137009447	.	-	0	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 3177 4627 .
Chr1	stalkie_big_nohaplotig	CDS	137009512	137009916	.	-	0	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 4628 5032 .
Chr1	stalkie_big_nohaplotig	CDS	137026172	137026198	.	-	0	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 5033 5059 .
Chr1	stalkie_big_nohaplotig	CDS	137026262	137026303	.	-	0	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 5060 5101 .
Chr1	stalkie_big_nohaplotig	CDS	137026511	137026642	.	-	0	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 5102 5233 .
Chr1	stalkie_big_nohaplotig	CDS	137026716	137027504	.	-	0	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 5234 6022 .
Chr1	stalkie_big_nohaplotig	CDS	137027638	137028243	.	-	0	Parent=comp155767_c0_seq1.mrna1;Target=comp155767_c0_seq1 6023 6628 .
Chr1	stalkie_big_nohaplotig	mRNA	137004183	137028243	.	-	.	ID=FBgn0260938.1.mrna1;geneID=FBgn0260938.1.path1;Name=FBgn0260938.1;Dir=sensecoverage=100.0;identity=99.8;matches=5967;mismatches=12;indels=0;unknowns=0;locus=RLOC_00011583
Chr1	stalkie_big_nohaplotig	exon	137004183	137005254	99	-	.	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 4908 5979 +
Chr1	stalkie_big_nohaplotig	exon	137005310	137005427	100	-	.	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 4790 4907 +
Chr1	stalkie_big_nohaplotig	exon	137005525	137005885	99	-	.	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 4429 4789 +
Chr1	stalkie_big_nohaplotig	exon	137006664	137007058	99	-	.	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 4034 4428 +
Chr1	stalkie_big_nohaplotig	exon	137007298	137007659	100	-	.	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 3672 4033 +
Chr1	stalkie_big_nohaplotig	exon	137007719	137007937	100	-	.	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 3453 3671 +
Chr1	stalkie_big_nohaplotig	exon	137007997	137009447	99	-	.	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 2002 3452 +
Chr1	stalkie_big_nohaplotig	exon	137009512	137009916	100	-	.	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 1597 2001 +
Chr1	stalkie_big_nohaplotig	exon	137026172	137026198	100	-	.	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 1570 1596 +
Chr1	stalkie_big_nohaplotig	exon	137026262	137026303	100	-	.	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 1528 1569 +
Chr1	stalkie_big_nohaplotig	exon	137026511	137026642	100	-	.	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 1396 1527 +
Chr1	stalkie_big_nohaplotig	exon	137026716	137027504	99	-	.	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 607 1395 +
Chr1	stalkie_big_nohaplotig	exon	137027638	137028243	99	-	.	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 1 606 +
Chr1	stalkie_big_nohaplotig	CDS	137004183	137005254	.	-	1	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 4908 5979 +
Chr1	stalkie_big_nohaplotig	CDS	137005310	137005427	.	-	2	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 4790 4907 +
Chr1	stalkie_big_nohaplotig	CDS	137005525	137005885	.	-	0	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 4429 4789 +
Chr1	stalkie_big_nohaplotig	CDS	137006664	137007058	.	-	2	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 4034 4428 +
Chr1	stalkie_big_nohaplotig	CDS	137007298	137007659	.	-	1	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 3672 4033 +
Chr1	stalkie_big_nohaplotig	CDS	137007719	137007937	.	-	1	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 3453 3671 +
Chr1	stalkie_big_nohaplotig	CDS	137007997	137009447	.	-	0	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 2002 3452 +
Chr1	stalkie_big_nohaplotig	CDS	137009512	137009916	.	-	0	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 1597 2001 +
Chr1	stalkie_big_nohaplotig	CDS	137026172	137026198	.	-	0	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 1570 1596 +
Chr1	stalkie_big_nohaplotig	CDS	137026262	137026303	.	-	0	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 1528 1569 +
Chr1	stalkie_big_nohaplotig	CDS	137026511	137026642	.	-	0	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 1396 1527 +
Chr1	stalkie_big_nohaplotig	CDS	137026716	137027504	.	-	0	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 607 1395 +
Chr1	stalkie_big_nohaplotig	CDS	137027638	137028243	.	-	0	Parent=FBgn0260938.1.mrna1;Target=FBgn0260938.1 1 606 +
Chr1	gffcl	locus	137012663	137013726	.	-	.	ID=RLOC_00011584;geneIDs=comp154575_c1_seq1.path1;transcripts=comp154575_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137012663	137013726	.	-	.	ID=comp154575_c1_seq1.mrna1;geneID=comp154575_c1_seq1.path1;Name=comp154575_c1_seq1;Dir=indeterminatecoverage=99.7;identity=99.8;matches=1062;mismatches=2;indels=0;unknowns=0;Target=comp154575_c1_seq1 1067 4 .;CDS_Target=comp154575_c1_seq1 130 5 .;locus=RLOC_00011584
Chr1	stalkie_big_nohaplotig	exon	137012663	137013726	99	-	.	Parent=comp154575_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137013600	137013725	.	-	0	Parent=comp154575_c1_seq1.mrna1
Chr1	gffcl	locus	137030801	137032707	.	+	.	ID=RLOC_00011585;geneIDs=FBgn0025808.1.path1;transcripts=FBgn0025808.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137030801	137032707	.	+	.	ID=FBgn0025808.1.mrna1;geneID=FBgn0025808.1.path1;Name=FBgn0025808.1;Dir=sensecoverage=100.0;identity=99.8;matches=1518;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011585
Chr1	stalkie_big_nohaplotig	exon	137030801	137030881	100	+	.	Parent=FBgn0025808.1.mrna1;Target=FBgn0025808.1 1 81 +
Chr1	stalkie_big_nohaplotig	exon	137030933	137031513	100	+	.	Parent=FBgn0025808.1.mrna1;Target=FBgn0025808.1 82 662 +
Chr1	stalkie_big_nohaplotig	exon	137031572	137031885	99	+	.	Parent=FBgn0025808.1.mrna1;Target=FBgn0025808.1 663 976 +
Chr1	stalkie_big_nohaplotig	exon	137032091	137032222	100	+	.	Parent=FBgn0025808.1.mrna1;Target=FBgn0025808.1 977 1108 +
Chr1	stalkie_big_nohaplotig	exon	137032295	137032707	99	+	.	Parent=FBgn0025808.1.mrna1;Target=FBgn0025808.1 1109 1521 +
Chr1	stalkie_big_nohaplotig	CDS	137030801	137030881	.	+	0	Parent=FBgn0025808.1.mrna1;Target=FBgn0025808.1 1 81 +
Chr1	stalkie_big_nohaplotig	CDS	137030933	137031513	.	+	0	Parent=FBgn0025808.1.mrna1;Target=FBgn0025808.1 82 662 +
Chr1	stalkie_big_nohaplotig	CDS	137031572	137031885	.	+	1	Parent=FBgn0025808.1.mrna1;Target=FBgn0025808.1 663 976 +
Chr1	stalkie_big_nohaplotig	CDS	137032091	137032222	.	+	2	Parent=FBgn0025808.1.mrna1;Target=FBgn0025808.1 977 1108 +
Chr1	stalkie_big_nohaplotig	CDS	137032295	137032707	.	+	2	Parent=FBgn0025808.1.mrna1;Target=FBgn0025808.1 1109 1521 +
Chr1	gffcl	locus	137033149	137035039	.	-	.	ID=RLOC_00011586;geneIDs=FBgn0029819.1.path1;transcripts=FBgn0029819.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137033149	137035039	.	-	.	ID=FBgn0029819.1.mrna1;geneID=FBgn0029819.1.path1;Name=FBgn0029819.1;Dir=sensecoverage=100.0;identity=99.8;matches=1566;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011586
Chr1	stalkie_big_nohaplotig	exon	137033149	137033257	100	-	.	Parent=FBgn0029819.1.mrna1;Target=FBgn0029819.1 1461 1569 +
Chr1	stalkie_big_nohaplotig	exon	137033315	137033523	100	-	.	Parent=FBgn0029819.1.mrna1;Target=FBgn0029819.1 1252 1460 +
Chr1	stalkie_big_nohaplotig	exon	137033582	137033905	100	-	.	Parent=FBgn0029819.1.mrna1;Target=FBgn0029819.1 928 1251 +
Chr1	stalkie_big_nohaplotig	exon	137033966	137034055	100	-	.	Parent=FBgn0029819.1.mrna1;Target=FBgn0029819.1 838 927 +
Chr1	stalkie_big_nohaplotig	exon	137034126	137034856	99	-	.	Parent=FBgn0029819.1.mrna1;Target=FBgn0029819.1 107 837 +
Chr1	stalkie_big_nohaplotig	exon	137034934	137035039	99	-	.	Parent=FBgn0029819.1.mrna1;Target=FBgn0029819.1 1 106 +
Chr1	stalkie_big_nohaplotig	CDS	137033149	137033257	.	-	1	Parent=FBgn0029819.1.mrna1;Target=FBgn0029819.1 1461 1569 +
Chr1	stalkie_big_nohaplotig	CDS	137033315	137033523	.	-	0	Parent=FBgn0029819.1.mrna1;Target=FBgn0029819.1 1252 1460 +
Chr1	stalkie_big_nohaplotig	CDS	137033582	137033905	.	-	0	Parent=FBgn0029819.1.mrna1;Target=FBgn0029819.1 928 1251 +
Chr1	stalkie_big_nohaplotig	CDS	137033966	137034055	.	-	0	Parent=FBgn0029819.1.mrna1;Target=FBgn0029819.1 838 927 +
Chr1	stalkie_big_nohaplotig	CDS	137034126	137034856	.	-	2	Parent=FBgn0029819.1.mrna1;Target=FBgn0029819.1 107 837 +
Chr1	stalkie_big_nohaplotig	CDS	137034934	137035039	.	-	0	Parent=FBgn0029819.1.mrna1;Target=FBgn0029819.1 1 106 +
Chr1	gffcl	locus	137042810	138237717	.	+	.	ID=RLOC_00011588;geneIDs=comp151044_c0_seq1.path1;transcripts=comp151044_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137042810	138237717	.	+	.	ID=comp151044_c0_seq1.mrna1;geneID=comp151044_c0_seq1.path1;Name=comp151044_c0_seq1;Dir=indeterminatecoverage=52.9;identity=88.6;matches=476;mismatches=12;indels=49;unknowns=0;locus=RLOC_00011588
Chr1	stalkie_big_nohaplotig	exon	137042810	137043185	99	+	.	Parent=comp151044_c0_seq1.mrna1;Target=comp151044_c0_seq1 515 139 .
Chr1	stalkie_big_nohaplotig	exon	137057637	137057644	100	+	.	Parent=comp151044_c0_seq1.mrna1;Target=comp151044_c0_seq1 523 516 .
Chr1	stalkie_big_nohaplotig	exon	137072544	137072549	100	+	.	Parent=comp151044_c0_seq1.mrna1;Target=comp151044_c0_seq1 529 524 .
Chr1	stalkie_big_nohaplotig	exon	137079559	137079565	100	+	.	Parent=comp151044_c0_seq1.mrna1;Target=comp151044_c0_seq1 536 530 .
Chr1	stalkie_big_nohaplotig	exon	137091040	137091079	50	+	.	Parent=comp151044_c0_seq1.mrna1;Target=comp151044_c0_seq1 605 537 .
Chr1	stalkie_big_nohaplotig	exon	138152767	138152788	59	+	.	Parent=comp151044_c0_seq1.mrna1;Target=comp151044_c0_seq1 618 606 .
Chr1	stalkie_big_nohaplotig	exon	138217275	138217300	65	+	.	Parent=comp151044_c0_seq1.mrna1;Target=comp151044_c0_seq1 650 619 .
Chr1	stalkie_big_nohaplotig	exon	138237705	138237717	80	+	.	Parent=comp151044_c0_seq1.mrna1;Target=comp151044_c0_seq1 665 651 .
Chr1	stalkie_big_nohaplotig	CDS	137091055	137091079	.	+	0	Parent=comp151044_c0_seq1.mrna1;Target=comp151044_c0_seq1 605 568 .
Chr1	stalkie_big_nohaplotig	CDS	138152767	138152788	.	+	2	Parent=comp151044_c0_seq1.mrna1;Target=comp151044_c0_seq1 618 606 .
Chr1	stalkie_big_nohaplotig	CDS	138217275	138217285	.	+	1	Parent=comp151044_c0_seq1.mrna1;Target=comp151044_c0_seq1 633 619 .
Chr1	gffcl	locus	137043529	137044738	.	+	.	ID=RLOC_00011589;geneIDs=comp113494_c0_seq1.path1;transcripts=comp113494_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137043529	137044738	.	+	.	ID=comp113494_c0_seq1.mrna1;geneID=comp113494_c0_seq1.path1;Name=comp113494_c0_seq1;Dir=indeterminatecoverage=98.6;identity=99.4;matches=1203;mismatches=2;indels=5;unknowns=0;Target=comp113494_c0_seq1 1222 18 .;CDS_Target=comp113494_c0_seq1 1145 1029 .;locus=RLOC_00011589
Chr1	stalkie_big_nohaplotig	exon	137043529	137044738	99	+	.	Parent=comp113494_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137044545	137044661	.	+	0	Parent=comp113494_c0_seq1.mrna1
Chr1	gffcl	locus	137045091	137072882	.	-	.	ID=RLOC_00011590;geneIDs=FBgn0041210.1.path1,comp158173_c0_seq1.path1;transcripts=comp158173_c0_seq1.mrna1,FBgn0041210.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137045091	137072882	.	-	.	ID=comp158173_c0_seq1.mrna1;geneID=comp158173_c0_seq1.path1;Name=comp158173_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=3865;mismatches=7;indels=2;unknowns=0;locus=RLOC_00011590
Chr1	stalkie_big_nohaplotig	exon	137045091	137045243	96	-	.	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 3720 3874 +
Chr1	stalkie_big_nohaplotig	exon	137046241	137046365	100	-	.	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 3595 3719 +
Chr1	stalkie_big_nohaplotig	exon	137046569	137047003	100	-	.	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 3160 3594 +
Chr1	stalkie_big_nohaplotig	exon	137047067	137047186	100	-	.	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 3040 3159 +
Chr1	stalkie_big_nohaplotig	exon	137047247	137048107	99	-	.	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 2179 3039 +
Chr1	stalkie_big_nohaplotig	exon	137048174	137048485	99	-	.	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 1867 2178 +
Chr1	stalkie_big_nohaplotig	exon	137049050	137049777	100	-	.	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 1139 1866 +
Chr1	stalkie_big_nohaplotig	exon	137050342	137050500	100	-	.	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 980 1138 +
Chr1	stalkie_big_nohaplotig	exon	137051302	137051432	100	-	.	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 849 979 +
Chr1	stalkie_big_nohaplotig	exon	137051502	137051572	100	-	.	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 778 848 +
Chr1	stalkie_big_nohaplotig	exon	137051633	137051794	100	-	.	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 616 777 +
Chr1	stalkie_big_nohaplotig	exon	137054448	137054555	100	-	.	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 508 615 +
Chr1	stalkie_big_nohaplotig	exon	137059117	137059226	100	-	.	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 398 507 +
Chr1	stalkie_big_nohaplotig	exon	137069870	137069922	100	-	.	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 345 397 +
Chr1	stalkie_big_nohaplotig	exon	137072539	137072882	100	-	.	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 1 344 +
Chr1	stalkie_big_nohaplotig	CDS	137045189	137045243	.	-	1	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 3720 3774 +
Chr1	stalkie_big_nohaplotig	CDS	137046241	137046365	.	-	0	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 3595 3719 +
Chr1	stalkie_big_nohaplotig	CDS	137046569	137047003	.	-	0	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 3160 3594 +
Chr1	stalkie_big_nohaplotig	CDS	137047067	137047186	.	-	0	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 3040 3159 +
Chr1	stalkie_big_nohaplotig	CDS	137047247	137048107	.	-	0	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 2179 3039 +
Chr1	stalkie_big_nohaplotig	CDS	137048174	137048485	.	-	0	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 1867 2178 +
Chr1	stalkie_big_nohaplotig	CDS	137049050	137049777	.	-	2	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 1139 1866 +
Chr1	stalkie_big_nohaplotig	CDS	137050342	137050500	.	-	2	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 980 1138 +
Chr1	stalkie_big_nohaplotig	CDS	137051302	137051432	.	-	1	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 849 979 +
Chr1	stalkie_big_nohaplotig	CDS	137051502	137051572	.	-	0	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 778 848 +
Chr1	stalkie_big_nohaplotig	CDS	137051633	137051794	.	-	0	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 616 777 +
Chr1	stalkie_big_nohaplotig	CDS	137054448	137054555	.	-	0	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 508 615 +
Chr1	stalkie_big_nohaplotig	CDS	137059117	137059226	.	-	2	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 398 507 +
Chr1	stalkie_big_nohaplotig	CDS	137069870	137069903	.	-	0	Parent=comp158173_c0_seq1.mrna1;Target=comp158173_c0_seq1 364 397 +
Chr1	stalkie_big_nohaplotig	mRNA	137045192	137059226	.	-	.	ID=FBgn0041210.1.mrna1;geneID=FBgn0041210.1.path1;Name=FBgn0041210.1;Dir=sensecoverage=98.1;identity=99.9;matches=3261;mismatches=3;indels=0;unknowns=2;locus=RLOC_00011590
Chr1	stalkie_big_nohaplotig	exon	137045192	137045243	100	-	.	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 3279 3330 +
Chr1	stalkie_big_nohaplotig	exon	137046241	137046365	100	-	.	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 3154 3278 +
Chr1	stalkie_big_nohaplotig	exon	137046569	137047003	100	-	.	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 2719 3153 +
Chr1	stalkie_big_nohaplotig	exon	137047067	137047186	100	-	.	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 2599 2718 +
Chr1	stalkie_big_nohaplotig	exon	137047247	137048107	99	-	.	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 1738 2598 +
Chr1	stalkie_big_nohaplotig	exon	137048174	137048485	99	-	.	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 1426 1737 +
Chr1	stalkie_big_nohaplotig	exon	137049050	137049777	100	-	.	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 698 1425 +
Chr1	stalkie_big_nohaplotig	exon	137050342	137050500	100	-	.	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 539 697 +
Chr1	stalkie_big_nohaplotig	exon	137051302	137051432	100	-	.	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 408 538 +
Chr1	stalkie_big_nohaplotig	exon	137051502	137051572	100	-	.	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 337 407 +
Chr1	stalkie_big_nohaplotig	exon	137051633	137051794	100	-	.	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 175 336 +
Chr1	stalkie_big_nohaplotig	exon	137059117	137059226	100	-	.	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 65 174 +
Chr1	stalkie_big_nohaplotig	CDS	137045192	137045243	.	-	1	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 3279 3330 +
Chr1	stalkie_big_nohaplotig	CDS	137046241	137046365	.	-	0	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 3154 3278 +
Chr1	stalkie_big_nohaplotig	CDS	137046569	137047003	.	-	0	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 2719 3153 +
Chr1	stalkie_big_nohaplotig	CDS	137047067	137047186	.	-	0	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 2599 2718 +
Chr1	stalkie_big_nohaplotig	CDS	137047247	137048107	.	-	0	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 1738 2598 +
Chr1	stalkie_big_nohaplotig	CDS	137048174	137048485	.	-	0	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 1426 1737 +
Chr1	stalkie_big_nohaplotig	CDS	137049050	137049777	.	-	2	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 698 1425 +
Chr1	stalkie_big_nohaplotig	CDS	137050342	137050500	.	-	2	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 539 697 +
Chr1	stalkie_big_nohaplotig	CDS	137051302	137051432	.	-	1	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 408 538 +
Chr1	stalkie_big_nohaplotig	CDS	137051502	137051572	.	-	0	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 337 407 +
Chr1	stalkie_big_nohaplotig	CDS	137051633	137051794	.	-	0	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 175 336 +
Chr1	stalkie_big_nohaplotig	CDS	137059117	137059224	.	-	0	Parent=FBgn0041210.1.mrna1;Target=FBgn0041210.1 67 174 +
Chr1	gffcl	locus	137074788	137075720	.	+	.	ID=RLOC_00011591;geneIDs=FBgn0030838.1.path1;transcripts=FBgn0030838.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137074788	137075720	.	+	.	ID=FBgn0030838.1.mrna1;geneID=FBgn0030838.1.path1;Name=FBgn0030838.1;Dir=sensecoverage=100.0;identity=100.0;matches=810;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011591
Chr1	stalkie_big_nohaplotig	exon	137074788	137075161	100	+	.	Parent=FBgn0030838.1.mrna1;Target=FBgn0030838.1 1 374 +
Chr1	stalkie_big_nohaplotig	exon	137075227	137075522	100	+	.	Parent=FBgn0030838.1.mrna1;Target=FBgn0030838.1 375 670 +
Chr1	stalkie_big_nohaplotig	exon	137075581	137075720	100	+	.	Parent=FBgn0030838.1.mrna1;Target=FBgn0030838.1 671 810 +
Chr1	stalkie_big_nohaplotig	CDS	137074788	137075161	.	+	0	Parent=FBgn0030838.1.mrna1;Target=FBgn0030838.1 1 374 +
Chr1	stalkie_big_nohaplotig	CDS	137075227	137075522	.	+	1	Parent=FBgn0030838.1.mrna1;Target=FBgn0030838.1 375 670 +
Chr1	stalkie_big_nohaplotig	CDS	137075581	137075720	.	+	2	Parent=FBgn0030838.1.mrna1;Target=FBgn0030838.1 671 810 +
Chr1	gffcl	locus	137077850	137084584	.	+	.	ID=RLOC_00011592;geneIDs=FBgn0030850.1.path1;transcripts=FBgn0030850.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137077850	137084584	.	+	.	ID=FBgn0030850.1.mrna1;geneID=FBgn0030850.1.path1;Name=FBgn0030850.1;Dir=sensecoverage=100.0;identity=99.9;matches=1007;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011592
Chr1	stalkie_big_nohaplotig	exon	137077850	137077976	100	+	.	Parent=FBgn0030850.1.mrna1;Target=FBgn0030850.1 1 127 +
Chr1	stalkie_big_nohaplotig	exon	137078042	137078288	100	+	.	Parent=FBgn0030850.1.mrna1;Target=FBgn0030850.1 128 374 +
Chr1	stalkie_big_nohaplotig	exon	137081214	137081342	100	+	.	Parent=FBgn0030850.1.mrna1;Target=FBgn0030850.1 375 503 +
Chr1	stalkie_big_nohaplotig	exon	137084080	137084584	99	+	.	Parent=FBgn0030850.1.mrna1;Target=FBgn0030850.1 504 1008 +
Chr1	stalkie_big_nohaplotig	CDS	137077850	137077976	.	+	0	Parent=FBgn0030850.1.mrna1;Target=FBgn0030850.1 1 127 +
Chr1	stalkie_big_nohaplotig	CDS	137078042	137078288	.	+	2	Parent=FBgn0030850.1.mrna1;Target=FBgn0030850.1 128 374 +
Chr1	stalkie_big_nohaplotig	CDS	137081214	137081342	.	+	1	Parent=FBgn0030850.1.mrna1;Target=FBgn0030850.1 375 503 +
Chr1	stalkie_big_nohaplotig	CDS	137084080	137084584	.	+	1	Parent=FBgn0030850.1.mrna1;Target=FBgn0030850.1 504 1008 +
Chr1	gffcl	locus	137084986	137085767	.	-	.	ID=RLOC_00011593;geneIDs=comp144617_c0_seq1.path1;transcripts=comp144617_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137084986	137085767	.	-	.	ID=comp144617_c0_seq1.mrna1;geneID=comp144617_c0_seq1.path1;Name=comp144617_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=766;mismatches=15;indels=1;unknowns=0;Target=comp144617_c0_seq1 781 1 .;CDS_Target=comp144617_c0_seq1 109 2 .;locus=RLOC_00011593
Chr1	stalkie_big_nohaplotig	exon	137084986	137085767	97	-	.	Parent=comp144617_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137085659	137085766	.	-	0	Parent=comp144617_c0_seq1.mrna1
Chr1	gffcl	locus	137086049	137086910	.	-	.	ID=RLOC_00011594;geneIDs=FBgn0025809.1.path1;transcripts=FBgn0025809.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137086049	137086910	.	-	.	ID=FBgn0025809.1.mrna1;geneID=FBgn0025809.1.path1;Name=FBgn0025809.1;Dir=sensecoverage=100.0;identity=100.0;matches=678;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011594
Chr1	stalkie_big_nohaplotig	exon	137086049	137086327	100	-	.	Parent=FBgn0025809.1.mrna1;Target=FBgn0025809.1 400 678 +
Chr1	stalkie_big_nohaplotig	exon	137086454	137086576	100	-	.	Parent=FBgn0025809.1.mrna1;Target=FBgn0025809.1 277 399 +
Chr1	stalkie_big_nohaplotig	exon	137086635	137086910	100	-	.	Parent=FBgn0025809.1.mrna1;Target=FBgn0025809.1 1 276 +
Chr1	stalkie_big_nohaplotig	CDS	137086049	137086327	.	-	0	Parent=FBgn0025809.1.mrna1;Target=FBgn0025809.1 400 678 +
Chr1	stalkie_big_nohaplotig	CDS	137086454	137086576	.	-	0	Parent=FBgn0025809.1.mrna1;Target=FBgn0025809.1 277 399 +
Chr1	stalkie_big_nohaplotig	CDS	137086635	137086910	.	-	0	Parent=FBgn0025809.1.mrna1;Target=FBgn0025809.1 1 276 +
Chr1	gffcl	locus	137088435	137088892	.	+	.	ID=RLOC_00011595;geneIDs=comp140355_c0_seq1.path1;transcripts=comp140355_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137088435	137088892	.	+	.	ID=comp140355_c0_seq1.mrna1;geneID=comp140355_c0_seq1.path1;Name=comp140355_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.7;matches=443;mismatches=15;indels=20;unknowns=0;Target=comp140355_c0_seq1 478 1 .;CDS_Target=comp140355_c0_seq1 462 307 .;locus=RLOC_00011595
Chr1	stalkie_big_nohaplotig	exon	137088435	137088892	92	+	.	Parent=comp140355_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137088721	137088876	.	+	0	Parent=comp140355_c0_seq1.mrna1
Chr1	gffcl	locus	137092899	137101614	.	+	.	ID=RLOC_00011596;geneIDs=FBgn0031144.1.path1;transcripts=FBgn0031144.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137092899	137101614	.	+	.	ID=FBgn0031144.1.mrna1;geneID=FBgn0031144.1.path1;Name=FBgn0031144.1;Dir=sensecoverage=100.0;identity=99.7;matches=2043;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011596
Chr1	stalkie_big_nohaplotig	exon	137092899	137093294	99	+	.	Parent=FBgn0031144.1.mrna1;Target=FBgn0031144.1 1 396 +
Chr1	stalkie_big_nohaplotig	exon	137093357	137093582	100	+	.	Parent=FBgn0031144.1.mrna1;Target=FBgn0031144.1 397 622 +
Chr1	stalkie_big_nohaplotig	exon	137096714	137097232	100	+	.	Parent=FBgn0031144.1.mrna1;Target=FBgn0031144.1 623 1141 +
Chr1	stalkie_big_nohaplotig	exon	137100707	137101614	99	+	.	Parent=FBgn0031144.1.mrna1;Target=FBgn0031144.1 1142 2049 +
Chr1	stalkie_big_nohaplotig	CDS	137092899	137093294	.	+	0	Parent=FBgn0031144.1.mrna1;Target=FBgn0031144.1 1 396 +
Chr1	stalkie_big_nohaplotig	CDS	137093357	137093582	.	+	0	Parent=FBgn0031144.1.mrna1;Target=FBgn0031144.1 397 622 +
Chr1	stalkie_big_nohaplotig	CDS	137096714	137097232	.	+	2	Parent=FBgn0031144.1.mrna1;Target=FBgn0031144.1 623 1141 +
Chr1	stalkie_big_nohaplotig	CDS	137100707	137101614	.	+	2	Parent=FBgn0031144.1.mrna1;Target=FBgn0031144.1 1142 2049 +
Chr1	gffcl	locus	137103262	137105080	.	+	.	ID=RLOC_00011597;geneIDs=FBgn0037922.2.path1;transcripts=FBgn0037922.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137103262	137105080	.	+	.	ID=FBgn0037922.2.mrna1;geneID=FBgn0037922.2.path1;Name=FBgn0037922.2;Dir=sensecoverage=100.0;identity=99.6;matches=1754;mismatches=7;indels=0;unknowns=0;locus=RLOC_00011597
Chr1	stalkie_big_nohaplotig	exon	137103262	137103900	99	+	.	Parent=FBgn0037922.2.mrna1;Target=FBgn0037922.2 1 639 +
Chr1	stalkie_big_nohaplotig	exon	137103959	137105080	99	+	.	Parent=FBgn0037922.2.mrna1;Target=FBgn0037922.2 640 1761 +
Chr1	stalkie_big_nohaplotig	CDS	137103262	137103900	.	+	0	Parent=FBgn0037922.2.mrna1;Target=FBgn0037922.2 1 639 +
Chr1	stalkie_big_nohaplotig	CDS	137103959	137105080	.	+	0	Parent=FBgn0037922.2.mrna1;Target=FBgn0037922.2 640 1761 +
Chr1	gffcl	locus	137106986	137107923	.	-	.	ID=RLOC_00011598;geneIDs=comp159294_c0_seq1.path1;transcripts=comp159294_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137106986	137107923	.	-	.	ID=comp159294_c0_seq1.mrna1;geneID=comp159294_c0_seq1.path1;Name=comp159294_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=924;mismatches=14;indels=1;unknowns=0;Target=comp159294_c0_seq1 939 1 .;CDS_Target=comp159294_c0_seq1 439 329 .;locus=RLOC_00011598
Chr1	stalkie_big_nohaplotig	exon	137106986	137107923	98	-	.	Parent=comp159294_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137107485	137107595	.	-	0	Parent=comp159294_c0_seq1.mrna1
Chr1	gffcl	locus	137107970	137108341	.	-	.	ID=RLOC_00011599;geneIDs=comp63098_c0_seq1.path1;transcripts=comp63098_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137107970	137108341	.	-	.	ID=comp63098_c0_seq1.mrna1;geneID=comp63098_c0_seq1.path1;Name=comp63098_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=364;mismatches=8;indels=1;unknowns=0;Target=comp63098_c0_seq1 373 1 .;CDS_Target=comp63098_c0_seq1 80 36 .;locus=RLOC_00011599
Chr1	stalkie_big_nohaplotig	exon	137107970	137108341	97	-	.	Parent=comp63098_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137108262	137108306	.	-	0	Parent=comp63098_c0_seq1.mrna1
Chr1	gffcl	locus	137108689	137108909	.	+	.	ID=RLOC_00011600;geneIDs=comp103363_c1_seq1.path1;transcripts=comp103363_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137108689	137108909	.	+	.	ID=comp103363_c1_seq1.mrna1;geneID=comp103363_c1_seq1.path1;Name=comp103363_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=219;mismatches=2;indels=0;unknowns=0;Target=comp103363_c1_seq1 221 1 .;CDS_Target=comp103363_c1_seq1 64 2 .;locus=RLOC_00011600
Chr1	stalkie_big_nohaplotig	exon	137108689	137108909	99	+	.	Parent=comp103363_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137108690	137108752	.	+	0	Parent=comp103363_c1_seq1.mrna1
Chr1	gffcl	locus	137109587	137110629	.	-	.	ID=RLOC_00011601;geneIDs=ORF1655.path1;transcripts=ORF1655.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137109587	137110629	.	-	.	ID=ORF1655.mrna1;geneID=ORF1655.path1;Name=ORF1655;Dir=indeterminatecoverage=100.0;identity=98.2;matches=1025;mismatches=9;indels=10;unknowns=0;Target=ORF1655 1035 1 .;CDS_Target=ORF1655 71 3 .;locus=RLOC_00011601
Chr1	stalkie_big_nohaplotig	exon	137109587	137110629	98	-	.	Parent=ORF1655.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137110560	137110627	.	-	0	Parent=ORF1655.mrna1
Chr1	gffcl	locus	137111976	137117978	.	+	.	ID=RLOC_00011602;geneIDs=FBgn0262647.1.path1;transcripts=FBgn0262647.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137111976	137117978	.	+	.	ID=FBgn0262647.1.mrna1;geneID=FBgn0262647.1.path1;Name=FBgn0262647.1;Dir=sensecoverage=100.0;identity=99.3;matches=4253;mismatches=31;indels=0;unknowns=0;locus=RLOC_00011602
Chr1	stalkie_big_nohaplotig	exon	137111976	137112069	100	+	.	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 1 94 +
Chr1	stalkie_big_nohaplotig	exon	137112134	137112239	99	+	.	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 95 200 +
Chr1	stalkie_big_nohaplotig	exon	137112295	137112668	99	+	.	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 201 574 +
Chr1	stalkie_big_nohaplotig	exon	137112730	137112919	99	+	.	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 575 764 +
Chr1	stalkie_big_nohaplotig	exon	137112980	137113164	100	+	.	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 765 949 +
Chr1	stalkie_big_nohaplotig	exon	137113230	137113642	100	+	.	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 950 1362 +
Chr1	stalkie_big_nohaplotig	exon	137113703	137114372	99	+	.	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 1363 2032 +
Chr1	stalkie_big_nohaplotig	exon	137114436	137114541	99	+	.	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 2033 2138 +
Chr1	stalkie_big_nohaplotig	exon	137114599	137114784	100	+	.	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 2139 2324 +
Chr1	stalkie_big_nohaplotig	exon	137114850	137115074	99	+	.	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 2325 2549 +
Chr1	stalkie_big_nohaplotig	exon	137115136	137115254	100	+	.	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 2550 2668 +
Chr1	stalkie_big_nohaplotig	exon	137116078	137116689	98	+	.	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 2669 3280 +
Chr1	stalkie_big_nohaplotig	exon	137116788	137117303	97	+	.	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 3281 3796 +
Chr1	stalkie_big_nohaplotig	exon	137117372	137117535	100	+	.	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 3797 3960 +
Chr1	stalkie_big_nohaplotig	exon	137117595	137117825	99	+	.	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 3961 4191 +
Chr1	stalkie_big_nohaplotig	exon	137117886	137117978	98	+	.	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 4192 4284 +
Chr1	stalkie_big_nohaplotig	CDS	137111976	137112069	.	+	0	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 1 94 +
Chr1	stalkie_big_nohaplotig	CDS	137112134	137112239	.	+	2	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 95 200 +
Chr1	stalkie_big_nohaplotig	CDS	137112295	137112668	.	+	1	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 201 574 +
Chr1	stalkie_big_nohaplotig	CDS	137112730	137112919	.	+	2	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 575 764 +
Chr1	stalkie_big_nohaplotig	CDS	137112980	137113164	.	+	1	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 765 949 +
Chr1	stalkie_big_nohaplotig	CDS	137113230	137113642	.	+	2	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 950 1362 +
Chr1	stalkie_big_nohaplotig	CDS	137113703	137114372	.	+	0	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 1363 2032 +
Chr1	stalkie_big_nohaplotig	CDS	137114436	137114541	.	+	2	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 2033 2138 +
Chr1	stalkie_big_nohaplotig	CDS	137114599	137114784	.	+	1	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 2139 2324 +
Chr1	stalkie_big_nohaplotig	CDS	137114850	137115074	.	+	1	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 2325 2549 +
Chr1	stalkie_big_nohaplotig	CDS	137115136	137115254	.	+	1	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 2550 2668 +
Chr1	stalkie_big_nohaplotig	CDS	137116078	137116689	.	+	2	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 2669 3280 +
Chr1	stalkie_big_nohaplotig	CDS	137116788	137117303	.	+	2	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 3281 3796 +
Chr1	stalkie_big_nohaplotig	CDS	137117372	137117535	.	+	2	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 3797 3960 +
Chr1	stalkie_big_nohaplotig	CDS	137117595	137117825	.	+	0	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 3961 4191 +
Chr1	stalkie_big_nohaplotig	CDS	137117886	137117978	.	+	0	Parent=FBgn0262647.1.mrna1;Target=FBgn0262647.1 4192 4284 +
Chr1	gffcl	locus	137118070	137119282	.	-	.	ID=RLOC_00011603;geneIDs=FBgn0028700.1.path1;transcripts=FBgn0028700.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137118070	137119282	.	-	.	ID=FBgn0028700.1.mrna1;geneID=FBgn0028700.1.path1;Name=FBgn0028700.1;Dir=sensecoverage=100.0;identity=98.8;matches=1091;mismatches=13;indels=0;unknowns=0;locus=RLOC_00011603
Chr1	stalkie_big_nohaplotig	exon	137118070	137119077	98	-	.	Parent=FBgn0028700.1.mrna1;Target=FBgn0028700.1 97 1104 +
Chr1	stalkie_big_nohaplotig	exon	137119187	137119282	97	-	.	Parent=FBgn0028700.1.mrna1;Target=FBgn0028700.1 1 96 +
Chr1	stalkie_big_nohaplotig	CDS	137118070	137119077	.	-	0	Parent=FBgn0028700.1.mrna1;Target=FBgn0028700.1 97 1104 +
Chr1	stalkie_big_nohaplotig	CDS	137119187	137119282	.	-	0	Parent=FBgn0028700.1.mrna1;Target=FBgn0028700.1 1 96 +
Chr1	gffcl	locus	137120902	137122307	.	+	.	ID=RLOC_00011604;geneIDs=ORF1740.path1;transcripts=ORF1740.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137120902	137122307	.	+	.	ID=ORF1740.mrna1;geneID=ORF1740.path1;Name=ORF1740;Dir=sensecoverage=100.0;identity=99.4;matches=1002;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011604
Chr1	stalkie_big_nohaplotig	exon	137120902	137121034	99	+	.	Parent=ORF1740.mrna1;Target=ORF1740 1 133 +
Chr1	stalkie_big_nohaplotig	exon	137121193	137121348	99	+	.	Parent=ORF1740.mrna1;Target=ORF1740 134 289 +
Chr1	stalkie_big_nohaplotig	exon	137121399	137121621	99	+	.	Parent=ORF1740.mrna1;Target=ORF1740 290 512 +
Chr1	stalkie_big_nohaplotig	exon	137121681	137121808	100	+	.	Parent=ORF1740.mrna1;Target=ORF1740 513 640 +
Chr1	stalkie_big_nohaplotig	exon	137121873	137121947	100	+	.	Parent=ORF1740.mrna1;Target=ORF1740 641 715 +
Chr1	stalkie_big_nohaplotig	exon	137122015	137122307	99	+	.	Parent=ORF1740.mrna1;Target=ORF1740 716 1008 +
Chr1	stalkie_big_nohaplotig	CDS	137120902	137121034	.	+	0	Parent=ORF1740.mrna1;Target=ORF1740 1 133 +
Chr1	stalkie_big_nohaplotig	CDS	137121193	137121348	.	+	2	Parent=ORF1740.mrna1;Target=ORF1740 134 289 +
Chr1	stalkie_big_nohaplotig	CDS	137121399	137121621	.	+	2	Parent=ORF1740.mrna1;Target=ORF1740 290 512 +
Chr1	stalkie_big_nohaplotig	CDS	137121681	137121808	.	+	1	Parent=ORF1740.mrna1;Target=ORF1740 513 640 +
Chr1	stalkie_big_nohaplotig	CDS	137121873	137121947	.	+	2	Parent=ORF1740.mrna1;Target=ORF1740 641 715 +
Chr1	stalkie_big_nohaplotig	CDS	137122015	137122307	.	+	2	Parent=ORF1740.mrna1;Target=ORF1740 716 1008 +
Chr1	gffcl	locus	137122616	137123041	.	-	.	ID=RLOC_00011605;geneIDs=comp118830_c0_seq1.path1;transcripts=comp118830_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137122616	137123041	.	-	.	ID=comp118830_c0_seq1.mrna1;geneID=comp118830_c0_seq1.path1;Name=comp118830_c0_seq1;Dir=indeterminatecoverage=97.9;identity=93.7;matches=400;mismatches=22;indels=5;unknowns=0;Target=comp118830_c0_seq1 432 10 .;CDS_Target=comp118830_c0_seq1 292 224 .;locus=RLOC_00011605
Chr1	stalkie_big_nohaplotig	exon	137122616	137123041	93	-	.	Parent=comp118830_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137122755	137122827	.	-	0	Parent=comp118830_c0_seq1.mrna1
Chr1	gffcl	locus	137123752	137124592	.	+	.	ID=RLOC_00011606;geneIDs=FBgn0032346.1.path1;transcripts=FBgn0032346.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137123752	137124592	.	+	.	ID=FBgn0032346.1.mrna1;geneID=FBgn0032346.1.path1;Name=FBgn0032346.1;Dir=sensecoverage=100.0;identity=99.3;matches=709;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011606
Chr1	stalkie_big_nohaplotig	exon	137123752	137124006	98	+	.	Parent=FBgn0032346.1.mrna1;Target=FBgn0032346.1 1 255 +
Chr1	stalkie_big_nohaplotig	exon	137124068	137124316	100	+	.	Parent=FBgn0032346.1.mrna1;Target=FBgn0032346.1 256 504 +
Chr1	stalkie_big_nohaplotig	exon	137124383	137124592	99	+	.	Parent=FBgn0032346.1.mrna1;Target=FBgn0032346.1 505 714 +
Chr1	stalkie_big_nohaplotig	CDS	137123752	137124006	.	+	0	Parent=FBgn0032346.1.mrna1;Target=FBgn0032346.1 1 255 +
Chr1	stalkie_big_nohaplotig	CDS	137124068	137124316	.	+	0	Parent=FBgn0032346.1.mrna1;Target=FBgn0032346.1 256 504 +
Chr1	stalkie_big_nohaplotig	CDS	137124383	137124592	.	+	0	Parent=FBgn0032346.1.mrna1;Target=FBgn0032346.1 505 714 +
Chr1	gffcl	locus	137125721	137127485	.	-	.	ID=RLOC_00011607;geneIDs=FBgn0030081.1.path1;transcripts=FBgn0030081.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137125721	137127485	.	-	.	ID=FBgn0030081.1.mrna1;geneID=FBgn0030081.1.path1;Name=FBgn0030081.1;Dir=sensecoverage=100.0;identity=99.5;matches=1525;mismatches=7;indels=1;unknowns=0;locus=RLOC_00011607
Chr1	stalkie_big_nohaplotig	exon	137125721	137126244	99	-	.	Parent=FBgn0030081.1.mrna1;Target=FBgn0030081.1 1009 1533 +
Chr1	stalkie_big_nohaplotig	exon	137126306	137126914	99	-	.	Parent=FBgn0030081.1.mrna1;Target=FBgn0030081.1 400 1008 +
Chr1	stalkie_big_nohaplotig	exon	137127029	137127332	99	-	.	Parent=FBgn0030081.1.mrna1;Target=FBgn0030081.1 96 399 +
Chr1	stalkie_big_nohaplotig	exon	137127391	137127485	100	-	.	Parent=FBgn0030081.1.mrna1;Target=FBgn0030081.1 1 95 +
Chr1	stalkie_big_nohaplotig	CDS	137125721	137126244	.	-	0	Parent=FBgn0030081.1.mrna1;Target=FBgn0030081.1 1009 1533 +
Chr1	stalkie_big_nohaplotig	CDS	137126306	137126914	.	-	0	Parent=FBgn0030081.1.mrna1;Target=FBgn0030081.1 400 1008 +
Chr1	stalkie_big_nohaplotig	CDS	137127029	137127332	.	-	1	Parent=FBgn0030081.1.mrna1;Target=FBgn0030081.1 96 399 +
Chr1	stalkie_big_nohaplotig	CDS	137127391	137127485	.	-	0	Parent=FBgn0030081.1.mrna1;Target=FBgn0030081.1 1 95 +
Chr1	gffcl	locus	137137754	137137959	.	-	.	ID=RLOC_00011608;geneIDs=comp86479_c0_seq1.path1;transcripts=comp86479_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137137754	137137959	.	-	.	ID=comp86479_c0_seq1.mrna1;geneID=comp86479_c0_seq1.path1;Name=comp86479_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=205;mismatches=1;indels=0;unknowns=0;Target=comp86479_c0_seq1 206 1 .;CDS_Target=comp86479_c0_seq1 142 92 .;locus=RLOC_00011608
Chr1	stalkie_big_nohaplotig	exon	137137754	137137959	99	-	.	Parent=comp86479_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137137818	137137868	.	-	0	Parent=comp86479_c0_seq1.mrna1
Chr1	gffcl	locus	137138394	137144856	.	-	.	ID=RLOC_00011609;geneIDs=FBgn0263256.1.path1;transcripts=FBgn0263256.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137138394	137144856	.	-	.	ID=FBgn0263256.1.mrna1;geneID=FBgn0263256.1.path1;Name=FBgn0263256.1;Dir=sensecoverage=100.0;identity=98.7;matches=1656;mismatches=5;indels=16;unknowns=0;Target=FBgn0263256.1 3 44 +;locus=RLOC_00011609
Chr1	stalkie_big_nohaplotig	exon	137138394	137138525	100	-	.	Parent=FBgn0263256.1.mrna1;Target=FBgn0263256.1 1546 1677 +
Chr1	stalkie_big_nohaplotig	exon	137141059	137141211	100	-	.	Parent=FBgn0263256.1.mrna1;Target=FBgn0263256.1 1393 1545 +
Chr1	stalkie_big_nohaplotig	exon	137141319	137141536	100	-	.	Parent=FBgn0263256.1.mrna1;Target=FBgn0263256.1 1175 1392 +
Chr1	stalkie_big_nohaplotig	exon	137143699	137144856	98	-	.	Parent=FBgn0263256.1.mrna1;Target=FBgn0263256.1 1 1174 +
Chr1	stalkie_big_nohaplotig	CDS	137144814	137144854	.	-	0	Parent=FBgn0263256.1.mrna1
Chr1	gffcl	locus	137183338	137189192	.	+	.	ID=RLOC_00011610;geneIDs=FBgn0039728.1.path1;transcripts=FBgn0039728.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137183338	137189192	.	+	.	ID=FBgn0039728.1.mrna1;geneID=FBgn0039728.1.path1;Name=FBgn0039728.1;Dir=sensecoverage=56.7;identity=99.2;matches=5283;mismatches=39;indels=6;unknowns=0;locus=RLOC_00011610
Chr1	stalkie_big_nohaplotig	exon	137183338	137186676	98	+	.	Parent=FBgn0039728.1.mrna1;Target=FBgn0039728.1 4063 7407 +
Chr1	stalkie_big_nohaplotig	exon	137186742	137186862	99	+	.	Parent=FBgn0039728.1.mrna1;Target=FBgn0039728.1 7408 7528 +
Chr1	stalkie_big_nohaplotig	exon	137186924	137187258	99	+	.	Parent=FBgn0039728.1.mrna1;Target=FBgn0039728.1 7529 7863 +
Chr1	stalkie_big_nohaplotig	exon	137187326	137187476	100	+	.	Parent=FBgn0039728.1.mrna1;Target=FBgn0039728.1 7864 8014 +
Chr1	stalkie_big_nohaplotig	exon	137187544	137187962	99	+	.	Parent=FBgn0039728.1.mrna1;Target=FBgn0039728.1 8015 8433 +
Chr1	stalkie_big_nohaplotig	exon	137188033	137188201	100	+	.	Parent=FBgn0039728.1.mrna1;Target=FBgn0039728.1 8434 8602 +
Chr1	stalkie_big_nohaplotig	exon	137188282	137188622	99	+	.	Parent=FBgn0039728.1.mrna1;Target=FBgn0039728.1 8603 8943 +
Chr1	stalkie_big_nohaplotig	exon	137188679	137188974	99	+	.	Parent=FBgn0039728.1.mrna1;Target=FBgn0039728.1 8944 9239 +
Chr1	stalkie_big_nohaplotig	exon	137189042	137189192	100	+	.	Parent=FBgn0039728.1.mrna1;Target=FBgn0039728.1 9240 9390 +
Chr1	stalkie_big_nohaplotig	CDS	137183338	137186676	.	+	0	Parent=FBgn0039728.1.mrna1;Target=FBgn0039728.1 4063 7407 +
Chr1	stalkie_big_nohaplotig	CDS	137186742	137186862	.	+	0	Parent=FBgn0039728.1.mrna1;Target=FBgn0039728.1 7408 7528 +
Chr1	stalkie_big_nohaplotig	CDS	137186924	137187258	.	+	2	Parent=FBgn0039728.1.mrna1;Target=FBgn0039728.1 7529 7863 +
Chr1	stalkie_big_nohaplotig	CDS	137187326	137187476	.	+	0	Parent=FBgn0039728.1.mrna1;Target=FBgn0039728.1 7864 8014 +
Chr1	stalkie_big_nohaplotig	CDS	137187544	137187962	.	+	2	Parent=FBgn0039728.1.mrna1;Target=FBgn0039728.1 8015 8433 +
Chr1	stalkie_big_nohaplotig	CDS	137188033	137188201	.	+	0	Parent=FBgn0039728.1.mrna1;Target=FBgn0039728.1 8434 8602 +
Chr1	stalkie_big_nohaplotig	CDS	137188282	137188622	.	+	2	Parent=FBgn0039728.1.mrna1;Target=FBgn0039728.1 8603 8943 +
Chr1	stalkie_big_nohaplotig	CDS	137188679	137188974	.	+	0	Parent=FBgn0039728.1.mrna1;Target=FBgn0039728.1 8944 9239 +
Chr1	stalkie_big_nohaplotig	CDS	137189042	137189192	.	+	1	Parent=FBgn0039728.1.mrna1;Target=FBgn0039728.1 9240 9390 +
Chr1	gffcl	locus	137190551	137193419	.	+	.	ID=RLOC_00011611;geneIDs=FBgn0031990.path1;transcripts=FBgn0031990.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137190551	137193419	.	+	.	ID=FBgn0031990.mrna1;geneID=FBgn0031990.path1;Name=FBgn0031990;Dir=sensecoverage=100.0;identity=99.3;matches=1894;mismatches=14;indels=0;unknowns=0;locus=RLOC_00011611
Chr1	stalkie_big_nohaplotig	exon	137190551	137190685	100	+	.	Parent=FBgn0031990.mrna1;Target=FBgn0031990 1 135 +
Chr1	stalkie_big_nohaplotig	exon	137190750	137190870	98	+	.	Parent=FBgn0031990.mrna1;Target=FBgn0031990 136 256 +
Chr1	stalkie_big_nohaplotig	exon	137191052	137191368	99	+	.	Parent=FBgn0031990.mrna1;Target=FBgn0031990 257 573 +
Chr1	stalkie_big_nohaplotig	exon	137191429	137191579	99	+	.	Parent=FBgn0031990.mrna1;Target=FBgn0031990 574 724 +
Chr1	stalkie_big_nohaplotig	exon	137191983	137192392	98	+	.	Parent=FBgn0031990.mrna1;Target=FBgn0031990 725 1134 +
Chr1	stalkie_big_nohaplotig	exon	137192458	137192545	97	+	.	Parent=FBgn0031990.mrna1;Target=FBgn0031990 1135 1222 +
Chr1	stalkie_big_nohaplotig	exon	137192609	137192949	100	+	.	Parent=FBgn0031990.mrna1;Target=FBgn0031990 1223 1563 +
Chr1	stalkie_big_nohaplotig	exon	137193011	137193261	99	+	.	Parent=FBgn0031990.mrna1;Target=FBgn0031990 1564 1814 +
Chr1	stalkie_big_nohaplotig	exon	137193326	137193419	100	+	.	Parent=FBgn0031990.mrna1;Target=FBgn0031990 1815 1908 +
Chr1	stalkie_big_nohaplotig	CDS	137190551	137190685	.	+	0	Parent=FBgn0031990.mrna1;Target=FBgn0031990 1 135 +
Chr1	stalkie_big_nohaplotig	CDS	137190750	137190870	.	+	0	Parent=FBgn0031990.mrna1;Target=FBgn0031990 136 256 +
Chr1	stalkie_big_nohaplotig	CDS	137191052	137191368	.	+	2	Parent=FBgn0031990.mrna1;Target=FBgn0031990 257 573 +
Chr1	stalkie_big_nohaplotig	CDS	137191429	137191579	.	+	0	Parent=FBgn0031990.mrna1;Target=FBgn0031990 574 724 +
Chr1	stalkie_big_nohaplotig	CDS	137191983	137192392	.	+	2	Parent=FBgn0031990.mrna1;Target=FBgn0031990 725 1134 +
Chr1	stalkie_big_nohaplotig	CDS	137192458	137192545	.	+	0	Parent=FBgn0031990.mrna1;Target=FBgn0031990 1135 1222 +
Chr1	stalkie_big_nohaplotig	CDS	137192609	137192949	.	+	2	Parent=FBgn0031990.mrna1;Target=FBgn0031990 1223 1563 +
Chr1	stalkie_big_nohaplotig	CDS	137193011	137193261	.	+	0	Parent=FBgn0031990.mrna1;Target=FBgn0031990 1564 1814 +
Chr1	stalkie_big_nohaplotig	CDS	137193326	137193419	.	+	1	Parent=FBgn0031990.mrna1;Target=FBgn0031990 1815 1908 +
Chr1	gffcl	locus	137193567	137195457	.	-	.	ID=RLOC_00011612;geneIDs=ORF2934.path1;transcripts=ORF2934.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137193567	137195457	.	-	.	ID=ORF2934.mrna1;geneID=ORF2934.path1;Name=ORF2934;Dir=sensecoverage=100.0;identity=98.5;matches=774;mismatches=12;indels=0;unknowns=0;locus=RLOC_00011612
Chr1	stalkie_big_nohaplotig	exon	137193567	137193689	97	-	.	Parent=ORF2934.mrna1;Target=ORF2934 664 786 +
Chr1	stalkie_big_nohaplotig	exon	137194482	137194602	99	-	.	Parent=ORF2934.mrna1;Target=ORF2934 543 663 +
Chr1	stalkie_big_nohaplotig	exon	137194848	137195167	99	-	.	Parent=ORF2934.mrna1;Target=ORF2934 223 542 +
Chr1	stalkie_big_nohaplotig	exon	137195236	137195457	97	-	.	Parent=ORF2934.mrna1;Target=ORF2934 1 222 +
Chr1	stalkie_big_nohaplotig	CDS	137193567	137193689	.	-	0	Parent=ORF2934.mrna1;Target=ORF2934 664 786 +
Chr1	stalkie_big_nohaplotig	CDS	137194482	137194602	.	-	1	Parent=ORF2934.mrna1;Target=ORF2934 543 663 +
Chr1	stalkie_big_nohaplotig	CDS	137194848	137195167	.	-	0	Parent=ORF2934.mrna1;Target=ORF2934 223 542 +
Chr1	stalkie_big_nohaplotig	CDS	137195236	137195457	.	-	0	Parent=ORF2934.mrna1;Target=ORF2934 1 222 +
Chr1	gffcl	locus	137198487	137206825	.	-	.	ID=RLOC_00011613;geneIDs=FBgn0023489.1.path1;transcripts=FBgn0023489.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137198487	137206825	.	-	.	ID=FBgn0023489.1.mrna1;geneID=FBgn0023489.1.path1;Name=FBgn0023489.1;Dir=sensecoverage=100.0;identity=99.9;matches=1166;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011613
Chr1	stalkie_big_nohaplotig	exon	137198487	137199289	99	-	.	Parent=FBgn0023489.1.mrna1;Target=FBgn0023489.1 365 1167 +
Chr1	stalkie_big_nohaplotig	exon	137199371	137199621	100	-	.	Parent=FBgn0023489.1.mrna1;Target=FBgn0023489.1 114 364 +
Chr1	stalkie_big_nohaplotig	exon	137206713	137206825	100	-	.	Parent=FBgn0023489.1.mrna1;Target=FBgn0023489.1 1 113 +
Chr1	stalkie_big_nohaplotig	CDS	137198487	137199289	.	-	2	Parent=FBgn0023489.1.mrna1;Target=FBgn0023489.1 365 1167 +
Chr1	stalkie_big_nohaplotig	CDS	137199371	137199621	.	-	1	Parent=FBgn0023489.1.mrna1;Target=FBgn0023489.1 114 364 +
Chr1	stalkie_big_nohaplotig	CDS	137206713	137206825	.	-	0	Parent=FBgn0023489.1.mrna1;Target=FBgn0023489.1 1 113 +
Chr1	gffcl	locus	137209887	137212047	.	+	.	ID=RLOC_00011614;geneIDs=FBgn0013323.1.path1;transcripts=FBgn0013323.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137209887	137212047	.	+	.	ID=FBgn0013323.1.mrna1;geneID=FBgn0013323.1.path1;Name=FBgn0013323.1;Dir=sensecoverage=100.0;identity=99.1;matches=925;mismatches=8;indels=0;unknowns=0;locus=RLOC_00011614
Chr1	stalkie_big_nohaplotig	exon	137209887	137209925	100	+	.	Parent=FBgn0013323.1.mrna1;Target=FBgn0013323.1 1 39 +
Chr1	stalkie_big_nohaplotig	exon	137210029	137210357	99	+	.	Parent=FBgn0013323.1.mrna1;Target=FBgn0013323.1 40 368 +
Chr1	stalkie_big_nohaplotig	exon	137211423	137211720	98	+	.	Parent=FBgn0013323.1.mrna1;Target=FBgn0013323.1 369 666 +
Chr1	stalkie_big_nohaplotig	exon	137211781	137212047	99	+	.	Parent=FBgn0013323.1.mrna1;Target=FBgn0013323.1 667 933 +
Chr1	stalkie_big_nohaplotig	CDS	137209887	137209925	.	+	0	Parent=FBgn0013323.1.mrna1;Target=FBgn0013323.1 1 39 +
Chr1	stalkie_big_nohaplotig	CDS	137210029	137210357	.	+	0	Parent=FBgn0013323.1.mrna1;Target=FBgn0013323.1 40 368 +
Chr1	stalkie_big_nohaplotig	CDS	137211423	137211720	.	+	1	Parent=FBgn0013323.1.mrna1;Target=FBgn0013323.1 369 666 +
Chr1	stalkie_big_nohaplotig	CDS	137211781	137212047	.	+	0	Parent=FBgn0013323.1.mrna1;Target=FBgn0013323.1 667 933 +
Chr1	gffcl	locus	137282030	137283376	.	-	.	ID=RLOC_00011616;geneIDs=FBgn0011823.3.path1;transcripts=FBgn0011823.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137282030	137283376	.	-	.	ID=FBgn0011823.3.mrna1;geneID=FBgn0011823.3.path1;Name=FBgn0011823.3;Dir=indeterminatecoverage=100.0;identity=98.5;matches=1327;mismatches=20;indels=0;unknowns=0;Target=FBgn0011823.3 1347 1 .;locus=RLOC_00011616
Chr1	stalkie_big_nohaplotig	exon	137282030	137283376	98	-	.	Parent=FBgn0011823.3.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137282030	137283376	.	-	0	Parent=FBgn0011823.3.mrna1
Chr1	gffcl	locus	137285433	137306136	.	+	.	ID=RLOC_00011617;geneIDs=FBgn0030030.1.path1,comp160824_c1_seq1.path1;transcripts=comp160824_c1_seq1.mrna1,FBgn0030030.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137285433	137306136	.	+	.	ID=comp160824_c1_seq1.mrna1;geneID=comp160824_c1_seq1.path1;Name=comp160824_c1_seq1;Dir=indeterminatecoverage=82.6;identity=99.4;matches=1613;mismatches=7;indels=3;unknowns=0;Target=comp160824_c1_seq1 1152 1024 .;locus=RLOC_00011617
Chr1	stalkie_big_nohaplotig	exon	137285433	137285436	100	+	.	Parent=comp160824_c1_seq1.mrna1;Target=comp160824_c1_seq1 426 423 .
Chr1	stalkie_big_nohaplotig	exon	137290885	137290890	100	+	.	Parent=comp160824_c1_seq1.mrna1;Target=comp160824_c1_seq1 432 427 .
Chr1	stalkie_big_nohaplotig	exon	137291348	137291351	100	+	.	Parent=comp160824_c1_seq1.mrna1;Target=comp160824_c1_seq1 436 433 .
Chr1	stalkie_big_nohaplotig	exon	137291970	137291979	100	+	.	Parent=comp160824_c1_seq1.mrna1;Target=comp160824_c1_seq1 446 437 .
Chr1	stalkie_big_nohaplotig	exon	137295088	137295095	87	+	.	Parent=comp160824_c1_seq1.mrna1;Target=comp160824_c1_seq1 454 447 .
Chr1	stalkie_big_nohaplotig	exon	137299022	137299029	100	+	.	Parent=comp160824_c1_seq1.mrna1;Target=comp160824_c1_seq1 462 455 .
Chr1	stalkie_big_nohaplotig	exon	137299084	137299091	100	+	.	Parent=comp160824_c1_seq1.mrna1;Target=comp160824_c1_seq1 579 572 .
Chr1	stalkie_big_nohaplotig	exon	137299141	137299149	100	+	.	Parent=comp160824_c1_seq1.mrna1;Target=comp160824_c1_seq1 647 639 .
Chr1	stalkie_big_nohaplotig	exon	137303936	137303943	100	+	.	Parent=comp160824_c1_seq1.mrna1;Target=comp160824_c1_seq1 842 835 .
Chr1	stalkie_big_nohaplotig	exon	137304432	137304440	100	+	.	Parent=comp160824_c1_seq1.mrna1;Target=comp160824_c1_seq1 870 862 .
Chr1	stalkie_big_nohaplotig	exon	137304590	137306136	99	+	.	Parent=comp160824_c1_seq1.mrna1;Target=comp160824_c1_seq1 2426 883 .
Chr1	stalkie_big_nohaplotig	CDS	137304734	137304862	.	+	0	Parent=comp160824_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137299066	137300985	.	+	.	ID=FBgn0030030.1.mrna1;geneID=FBgn0030030.1.path1;Name=FBgn0030030.1;Dir=sensecoverage=100.0;identity=99.5;matches=1163;mismatches=6;indels=0;unknowns=1;locus=RLOC_00011617
Chr1	stalkie_big_nohaplotig	exon	137299066	137299293	100	+	.	Parent=FBgn0030030.1.mrna1;Target=FBgn0030030.1 1 228 +
Chr1	stalkie_big_nohaplotig	exon	137299776	137300122	99	+	.	Parent=FBgn0030030.1.mrna1;Target=FBgn0030030.1 229 575 +
Chr1	stalkie_big_nohaplotig	exon	137300191	137300334	97	+	.	Parent=FBgn0030030.1.mrna1;Target=FBgn0030030.1 576 719 +
Chr1	stalkie_big_nohaplotig	exon	137300405	137300605	100	+	.	Parent=FBgn0030030.1.mrna1;Target=FBgn0030030.1 720 920 +
Chr1	stalkie_big_nohaplotig	exon	137300671	137300828	99	+	.	Parent=FBgn0030030.1.mrna1;Target=FBgn0030030.1 921 1078 +
Chr1	stalkie_big_nohaplotig	exon	137300894	137300985	100	+	.	Parent=FBgn0030030.1.mrna1;Target=FBgn0030030.1 1079 1170 +
Chr1	stalkie_big_nohaplotig	CDS	137299066	137299293	.	+	0	Parent=FBgn0030030.1.mrna1;Target=FBgn0030030.1 1 228 +
Chr1	stalkie_big_nohaplotig	CDS	137299776	137300122	.	+	0	Parent=FBgn0030030.1.mrna1;Target=FBgn0030030.1 229 575 +
Chr1	stalkie_big_nohaplotig	CDS	137300191	137300334	.	+	1	Parent=FBgn0030030.1.mrna1;Target=FBgn0030030.1 576 719 +
Chr1	stalkie_big_nohaplotig	CDS	137300405	137300605	.	+	1	Parent=FBgn0030030.1.mrna1;Target=FBgn0030030.1 720 920 +
Chr1	stalkie_big_nohaplotig	CDS	137300671	137300828	.	+	1	Parent=FBgn0030030.1.mrna1;Target=FBgn0030030.1 921 1078 +
Chr1	stalkie_big_nohaplotig	CDS	137300894	137300985	.	+	2	Parent=FBgn0030030.1.mrna1;Target=FBgn0030030.1 1079 1170 +
Chr1	gffcl	locus	137285519	137296664	.	+	.	ID=RLOC_00011618;geneIDs=FBgn0030027.1.path1;transcripts=FBgn0030027.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137285519	137296664	.	+	.	ID=FBgn0030027.1.mrna1;geneID=FBgn0030027.1.path1;Name=FBgn0030027.1;Dir=sensecoverage=93.6;identity=99.3;matches=2884;mismatches=19;indels=0;unknowns=0;locus=RLOC_00011618
Chr1	stalkie_big_nohaplotig	exon	137285519	137285899	100	+	.	Parent=FBgn0030027.1.mrna1;Target=FBgn0030027.1 200 580 +
Chr1	stalkie_big_nohaplotig	exon	137285970	137286180	100	+	.	Parent=FBgn0030027.1.mrna1;Target=FBgn0030027.1 581 791 +
Chr1	stalkie_big_nohaplotig	exon	137288094	137288926	99	+	.	Parent=FBgn0030027.1.mrna1;Target=FBgn0030027.1 792 1624 +
Chr1	stalkie_big_nohaplotig	exon	137288988	137289189	98	+	.	Parent=FBgn0030027.1.mrna1;Target=FBgn0030027.1 1625 1826 +
Chr1	stalkie_big_nohaplotig	exon	137289250	137289523	100	+	.	Parent=FBgn0030027.1.mrna1;Target=FBgn0030027.1 1827 2100 +
Chr1	stalkie_big_nohaplotig	exon	137289584	137290408	98	+	.	Parent=FBgn0030027.1.mrna1;Target=FBgn0030027.1 2101 2925 +
Chr1	stalkie_big_nohaplotig	exon	137296488	137296664	99	+	.	Parent=FBgn0030027.1.mrna1;Target=FBgn0030027.1 2926 3102 +
Chr1	stalkie_big_nohaplotig	CDS	137285521	137285899	.	+	0	Parent=FBgn0030027.1.mrna1;Target=FBgn0030027.1 202 580 +
Chr1	stalkie_big_nohaplotig	CDS	137285970	137286180	.	+	2	Parent=FBgn0030027.1.mrna1;Target=FBgn0030027.1 581 791 +
Chr1	stalkie_big_nohaplotig	CDS	137288094	137288926	.	+	1	Parent=FBgn0030027.1.mrna1;Target=FBgn0030027.1 792 1624 +
Chr1	stalkie_big_nohaplotig	CDS	137288988	137289189	.	+	2	Parent=FBgn0030027.1.mrna1;Target=FBgn0030027.1 1625 1826 +
Chr1	stalkie_big_nohaplotig	CDS	137289250	137289523	.	+	1	Parent=FBgn0030027.1.mrna1;Target=FBgn0030027.1 1827 2100 +
Chr1	stalkie_big_nohaplotig	CDS	137289584	137290408	.	+	0	Parent=FBgn0030027.1.mrna1;Target=FBgn0030027.1 2101 2925 +
Chr1	stalkie_big_nohaplotig	CDS	137296488	137296664	.	+	0	Parent=FBgn0030027.1.mrna1;Target=FBgn0030027.1 2926 3102 +
Chr1	gffcl	locus	137295956	137296329	.	-	.	ID=RLOC_00011619;geneIDs=comp144191_c0_seq1.path1;transcripts=comp144191_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137295956	137296329	.	-	.	ID=comp144191_c0_seq1.mrna1;geneID=comp144191_c0_seq1.path1;Name=comp144191_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=369;mismatches=5;indels=0;unknowns=0;Target=comp144191_c0_seq1 374 1 .;CDS_Target=comp144191_c0_seq1 21 1 .;locus=RLOC_00011619
Chr1	stalkie_big_nohaplotig	exon	137295956	137296329	98	-	.	Parent=comp144191_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137296309	137296329	.	-	0	Parent=comp144191_c0_seq1.mrna1
Chr1	gffcl	locus	137301266	137303357	.	+	.	ID=RLOC_00011621;geneIDs=comp150276_c0_seq1.path1,comp157014_c1_seq1.path1;transcripts=comp157014_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137301838	137303357	.	+	.	ID=comp157014_c1_seq1.mrna1;geneID=comp157014_c1_seq1.path1;Name=comp157014_c1_seq1;Dir=indeterminatecoverage=99.7;identity=98.7;matches=1500;mismatches=17;indels=3;unknowns=0;Target=comp157014_c1_seq1 1522 6 .;CDS_Target=comp157014_c1_seq1 1383 1294 .;locus=RLOC_00011621
Chr1	stalkie_big_nohaplotig	exon	137301838	137303357	98	+	.	Parent=comp157014_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137303129	137303218	.	+	0	Parent=comp157014_c1_seq1.mrna1
Chr1	gffcl	locus	137524529	137526169	.	+	.	ID=RLOC_00011623;geneIDs=FBgn0011823.4.path1;transcripts=FBgn0011823.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137524529	137526169	.	+	.	ID=FBgn0011823.4.mrna1;geneID=FBgn0011823.4.path1;Name=FBgn0011823.4;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1639;mismatches=2;indels=0;unknowns=0;Target=FBgn0011823.4 1641 1 .;locus=RLOC_00011623
Chr1	stalkie_big_nohaplotig	exon	137524529	137526169	99	+	.	Parent=FBgn0011823.4.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137524529	137526169	.	+	0	Parent=FBgn0011823.4.mrna1
Chr1	gffcl	locus	137541787	137542292	.	-	.	ID=RLOC_00011624;geneIDs=comp135614_c0_seq1.path1;transcripts=comp135614_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137541787	137542292	.	-	.	ID=comp135614_c0_seq1.mrna1;geneID=comp135614_c0_seq1.path1;Name=comp135614_c0_seq1;Dir=indeterminatecoverage=99.6;identity=97.2;matches=492;mismatches=14;indels=0;unknowns=0;Target=comp135614_c0_seq1 508 3 .;CDS_Target=comp135614_c0_seq1 89 3 .;locus=RLOC_00011624
Chr1	stalkie_big_nohaplotig	exon	137541787	137542292	97	-	.	Parent=comp135614_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137542206	137542292	.	-	0	Parent=comp135614_c0_seq1.mrna1
Chr1	gffcl	locus	137594072	137594310	.	-	.	ID=RLOC_00011626;geneIDs=FBgn0259245.1.path1;transcripts=FBgn0259245.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137594072	137594310	.	-	.	ID=FBgn0259245.1.mrna1;geneID=FBgn0259245.1.path1;Name=FBgn0259245.1;Dir=indeterminatecoverage=20.7;identity=100.0;matches=239;mismatches=0;indels=0;unknowns=0;Target=FBgn0259245.1 239 1 .;locus=RLOC_00011626
Chr1	stalkie_big_nohaplotig	exon	137594072	137594310	100	-	.	Parent=FBgn0259245.1.mrna1
Chr1	gffcl	locus	137608371	137609089	.	+	.	ID=RLOC_00011627;geneIDs=FBgn0025378.1.path1,comp146729_c1_seq1.path1;transcripts=comp146729_c1_seq1.mrna1,FBgn0025378.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137608371	137609089	.	+	.	ID=comp146729_c1_seq1.mrna1;geneID=comp146729_c1_seq1.path1;Name=comp146729_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=714;mismatches=5;indels=0;unknowns=0;Target=comp146729_c1_seq1 719 1 .;CDS_Target=comp146729_c1_seq1 349 2 .;locus=RLOC_00011627
Chr1	stalkie_big_nohaplotig	exon	137608371	137609089	99	+	.	Parent=comp146729_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137608372	137608719	.	+	0	Parent=comp146729_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137608372	137609087	.	+	.	ID=FBgn0025378.1.mrna1;geneID=FBgn0025378.1.path1;Name=FBgn0025378.1;Dir=sensecoverage=100.0;identity=99.2;matches=649;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011627
Chr1	stalkie_big_nohaplotig	exon	137608372	137608608	99	+	.	Parent=FBgn0025378.1.mrna1;Target=FBgn0025378.1 1 237 +
Chr1	stalkie_big_nohaplotig	exon	137608671	137609087	99	+	.	Parent=FBgn0025378.1.mrna1;Target=FBgn0025378.1 238 654 +
Chr1	stalkie_big_nohaplotig	CDS	137608372	137608608	.	+	0	Parent=FBgn0025378.1.mrna1;Target=FBgn0025378.1 1 237 +
Chr1	stalkie_big_nohaplotig	CDS	137608671	137609087	.	+	0	Parent=FBgn0025378.1.mrna1;Target=FBgn0025378.1 238 654 +
Chr1	gffcl	locus	137615543	137616553	.	+	.	ID=RLOC_00011628;geneIDs=FBgn0025378.9.path1;transcripts=FBgn0025378.9.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137615543	137616553	.	+	.	ID=FBgn0025378.9.mrna1;geneID=FBgn0025378.9.path1;Name=FBgn0025378.9;Dir=sensecoverage=98.9;identity=98.3;matches=881;mismatches=15;indels=0;unknowns=0;locus=RLOC_00011628
Chr1	stalkie_big_nohaplotig	exon	137615543	137615804	97	+	.	Parent=FBgn0025378.9.mrna1;Target=FBgn0025378.9 11 272 +
Chr1	stalkie_big_nohaplotig	exon	137615857	137616133	97	+	.	Parent=FBgn0025378.9.mrna1;Target=FBgn0025378.9 273 549 +
Chr1	stalkie_big_nohaplotig	exon	137616197	137616553	99	+	.	Parent=FBgn0025378.9.mrna1;Target=FBgn0025378.9 550 906 +
Chr1	stalkie_big_nohaplotig	CDS	137615545	137615804	.	+	0	Parent=FBgn0025378.9.mrna1;Target=FBgn0025378.9 13 272 +
Chr1	stalkie_big_nohaplotig	CDS	137615857	137616133	.	+	1	Parent=FBgn0025378.9.mrna1;Target=FBgn0025378.9 273 549 +
Chr1	stalkie_big_nohaplotig	CDS	137616197	137616553	.	+	0	Parent=FBgn0025378.9.mrna1;Target=FBgn0025378.9 550 906 +
Chr1	gffcl	locus	137618725	137619766	.	+	.	ID=RLOC_00011629;geneIDs=FBgn0025378.2.path1;transcripts=FBgn0025378.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137618725	137619766	.	+	.	ID=FBgn0025378.2.mrna1;geneID=FBgn0025378.2.path1;Name=FBgn0025378.2;Dir=sensecoverage=100.0;identity=97.9;matches=902;mismatches=19;indels=0;unknowns=0;locus=RLOC_00011629
Chr1	stalkie_big_nohaplotig	exon	137618725	137619023	97	+	.	Parent=FBgn0025378.2.mrna1;Target=FBgn0025378.2 1 299 +
Chr1	stalkie_big_nohaplotig	exon	137619084	137619360	98	+	.	Parent=FBgn0025378.2.mrna1;Target=FBgn0025378.2 300 576 +
Chr1	stalkie_big_nohaplotig	exon	137619422	137619766	97	+	.	Parent=FBgn0025378.2.mrna1;Target=FBgn0025378.2 577 921 +
Chr1	stalkie_big_nohaplotig	CDS	137618725	137619023	.	+	0	Parent=FBgn0025378.2.mrna1;Target=FBgn0025378.2 1 299 +
Chr1	stalkie_big_nohaplotig	CDS	137619084	137619360	.	+	1	Parent=FBgn0025378.2.mrna1;Target=FBgn0025378.2 300 576 +
Chr1	stalkie_big_nohaplotig	CDS	137619422	137619766	.	+	0	Parent=FBgn0025378.2.mrna1;Target=FBgn0025378.2 577 921 +
Chr1	gffcl	locus	137646530	137647292	.	+	.	ID=RLOC_00011631;geneIDs=comp154983_c1_seq1.path1;transcripts=comp154983_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137646530	137647292	.	+	.	ID=comp154983_c1_seq1.mrna1;geneID=comp154983_c1_seq1.path1;Name=comp154983_c1_seq1;Dir=indeterminatecoverage=99.9;identity=98.4;matches=751;mismatches=12;indels=0;unknowns=0;Target=comp154983_c1_seq1 763 1 .;CDS_Target=comp154983_c1_seq1 495 355 .;locus=RLOC_00011631
Chr1	stalkie_big_nohaplotig	exon	137646530	137647292	98	+	.	Parent=comp154983_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137646884	137647024	.	+	0	Parent=comp154983_c1_seq1.mrna1
Chr1	gffcl	locus	137651173	137651765	.	+	.	ID=RLOC_00011632;geneIDs=Dp_FBgn0249362.path4;transcripts=Dp_FBgn0249362.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	137651173	137651765	.	+	.	ID=Dp_FBgn0249362.mrna4;geneID=Dp_FBgn0249362.path4;Name=Dp_FBgn0249362;Dir=indeterminatecoverage=100.0;identity=99.3;matches=590;mismatches=3;indels=1;unknowns=0;Target=Dp_FBgn0249362 594 1 .;locus=RLOC_00011632
Chr1	stalkie_big_nohaplotig	exon	137651173	137651765	99	+	.	Parent=Dp_FBgn0249362.mrna4
Chr1	stalkie_big_nohaplotig	CDS	137651173	137651765	.	+	0	Parent=Dp_FBgn0249362.mrna4
Chr1	gffcl	locus	137691994	137695955	.	+	.	ID=RLOC_00011633;geneIDs=comp152947_c0_seq1.path1;transcripts=comp152947_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137691994	137695955	.	+	.	ID=comp152947_c0_seq1.mrna1;geneID=comp152947_c0_seq1.path1;Name=comp152947_c0_seq1;Dir=sensecoverage=99.1;identity=100.0;matches=1973;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011633
Chr1	stalkie_big_nohaplotig	exon	137691994	137692195	100	+	.	Parent=comp152947_c0_seq1.mrna1;Target=comp152947_c0_seq1 1 202 +
Chr1	stalkie_big_nohaplotig	exon	137693149	137693332	100	+	.	Parent=comp152947_c0_seq1.mrna1;Target=comp152947_c0_seq1 203 386 +
Chr1	stalkie_big_nohaplotig	exon	137693409	137693651	100	+	.	Parent=comp152947_c0_seq1.mrna1;Target=comp152947_c0_seq1 387 629 +
Chr1	stalkie_big_nohaplotig	exon	137693709	137693985	100	+	.	Parent=comp152947_c0_seq1.mrna1;Target=comp152947_c0_seq1 630 906 +
Chr1	stalkie_big_nohaplotig	exon	137694051	137694256	100	+	.	Parent=comp152947_c0_seq1.mrna1;Target=comp152947_c0_seq1 907 1112 +
Chr1	stalkie_big_nohaplotig	exon	137694834	137695081	100	+	.	Parent=comp152947_c0_seq1.mrna1;Target=comp152947_c0_seq1 1113 1360 +
Chr1	stalkie_big_nohaplotig	exon	137695143	137695268	100	+	.	Parent=comp152947_c0_seq1.mrna1;Target=comp152947_c0_seq1 1361 1486 +
Chr1	stalkie_big_nohaplotig	exon	137695339	137695446	100	+	.	Parent=comp152947_c0_seq1.mrna1;Target=comp152947_c0_seq1 1487 1594 +
Chr1	stalkie_big_nohaplotig	exon	137695513	137695549	100	+	.	Parent=comp152947_c0_seq1.mrna1;Target=comp152947_c0_seq1 1595 1631 +
Chr1	stalkie_big_nohaplotig	exon	137695614	137695955	100	+	.	Parent=comp152947_c0_seq1.mrna1;Target=comp152947_c0_seq1 1632 1973 +
Chr1	stalkie_big_nohaplotig	CDS	137693249	137693332	.	+	0	Parent=comp152947_c0_seq1.mrna1;Target=comp152947_c0_seq1 303 386 +
Chr1	stalkie_big_nohaplotig	CDS	137693409	137693651	.	+	0	Parent=comp152947_c0_seq1.mrna1;Target=comp152947_c0_seq1 387 629 +
Chr1	stalkie_big_nohaplotig	CDS	137693709	137693985	.	+	0	Parent=comp152947_c0_seq1.mrna1;Target=comp152947_c0_seq1 630 906 +
Chr1	stalkie_big_nohaplotig	CDS	137694051	137694256	.	+	2	Parent=comp152947_c0_seq1.mrna1;Target=comp152947_c0_seq1 907 1112 +
Chr1	stalkie_big_nohaplotig	CDS	137694834	137695081	.	+	0	Parent=comp152947_c0_seq1.mrna1;Target=comp152947_c0_seq1 1113 1360 +
Chr1	stalkie_big_nohaplotig	CDS	137695143	137695268	.	+	1	Parent=comp152947_c0_seq1.mrna1;Target=comp152947_c0_seq1 1361 1486 +
Chr1	stalkie_big_nohaplotig	CDS	137695339	137695446	.	+	1	Parent=comp152947_c0_seq1.mrna1;Target=comp152947_c0_seq1 1487 1594 +
Chr1	stalkie_big_nohaplotig	CDS	137695513	137695549	.	+	1	Parent=comp152947_c0_seq1.mrna1;Target=comp152947_c0_seq1 1595 1631 +
Chr1	stalkie_big_nohaplotig	CDS	137695614	137695685	.	+	0	Parent=comp152947_c0_seq1.mrna1;Target=comp152947_c0_seq1 1632 1703 +
Chr1	gffcl	locus	137692206	137692945	.	-	.	ID=RLOC_00011634;geneIDs=comp155586_c0_seq1.path1;transcripts=comp155586_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137692206	137692945	.	-	.	ID=comp155586_c0_seq1.mrna1;geneID=comp155586_c0_seq1.path1;Name=comp155586_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=734;mismatches=6;indels=6;unknowns=0;Target=comp155586_c0_seq1 746 1 .;CDS_Target=comp155586_c0_seq1 608 384 .;locus=RLOC_00011634
Chr1	stalkie_big_nohaplotig	exon	137692206	137692945	98	-	.	Parent=comp155586_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137692344	137692562	.	-	0	Parent=comp155586_c0_seq1.mrna1
Chr1	gffcl	locus	137707343	137707746	.	-	.	ID=RLOC_00011635;geneIDs=comp150340_c1_seq1.path1;transcripts=comp150340_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137707343	137707746	.	-	.	ID=comp150340_c1_seq1.mrna1;geneID=comp150340_c1_seq1.path1;Name=comp150340_c1_seq1;Dir=indeterminatecoverage=93.6;identity=98.5;matches=401;mismatches=3;indels=3;unknowns=0;Target=comp150340_c1_seq1 407 1 .;CDS_Target=comp150340_c1_seq1 271 2 .;locus=RLOC_00011635
Chr1	stalkie_big_nohaplotig	exon	137707343	137707746	98	-	.	Parent=comp150340_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137707476	137707745	.	-	0	Parent=comp150340_c1_seq1.mrna1
Chr1	gffcl	locus	137709195	137709949	.	+	.	ID=RLOC_00011636;geneIDs=comp151468_c0_seq1.path1;transcripts=comp151468_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137709195	137709949	.	+	.	ID=comp151468_c0_seq1.mrna1;geneID=comp151468_c0_seq1.path1;Name=comp151468_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=754;mismatches=1;indels=0;unknowns=0;Target=comp151468_c0_seq1 756 2 .;CDS_Target=comp151468_c0_seq1 104 3 .;locus=RLOC_00011636
Chr1	stalkie_big_nohaplotig	exon	137709195	137709949	99	+	.	Parent=comp151468_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137709196	137709297	.	+	0	Parent=comp151468_c0_seq1.mrna1
Chr1	gffcl	locus	137711961	137712734	.	+	.	ID=RLOC_00011637;geneIDs=comp148985_c0_seq1.path1;transcripts=comp148985_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137711961	137712734	.	+	.	ID=comp148985_c0_seq1.mrna1;geneID=comp148985_c0_seq1.path1;Name=comp148985_c0_seq1;Dir=antisensecoverage=100.0;identity=97.6;matches=692;mismatches=13;indels=4;unknowns=0;locus=RLOC_00011637
Chr1	stalkie_big_nohaplotig	exon	137711961	137712259	96	+	.	Parent=comp148985_c0_seq1.mrna1;Target=comp148985_c0_seq1 411 705 -
Chr1	stalkie_big_nohaplotig	exon	137712325	137712734	98	+	.	Parent=comp148985_c0_seq1.mrna1;Target=comp148985_c0_seq1 1 410 -
Chr1	stalkie_big_nohaplotig	CDS	137712248	137712259	.	+	0	Parent=comp148985_c0_seq1.mrna1;Target=comp148985_c0_seq1 411 422 .
Chr1	stalkie_big_nohaplotig	CDS	137712325	137712678	.	+	0	Parent=comp148985_c0_seq1.mrna1;Target=comp148985_c0_seq1 57 410 .
Chr1	gffcl	locus	137728164	137728321	.	-	.	ID=RLOC_00011638;geneIDs=FBgn0044872.2.path2;transcripts=FBgn0044872.2.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	137728164	137728321	.	-	.	ID=FBgn0044872.2.mrna2;geneID=FBgn0044872.2.path2;Name=FBgn0044872.2;Dir=indeterminatecoverage=12.2;identity=99.4;matches=157;mismatches=1;indels=0;unknowns=0;Target=FBgn0044872.2 1293 1136 .;locus=RLOC_00011638
Chr1	stalkie_big_nohaplotig	exon	137728164	137728321	99	-	.	Parent=FBgn0044872.2.mrna2
Chr1	stalkie_big_nohaplotig	CDS	137728164	137728321	.	-	1	Parent=FBgn0044872.2.mrna2
Chr1	gffcl	locus	137735141	137735543	.	+	.	ID=RLOC_00011639;geneIDs=comp153615_c1_seq1.path2;transcripts=comp153615_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	137735141	137735543	.	+	.	ID=comp153615_c1_seq1.mrna2;geneID=comp153615_c1_seq1.path2;Name=comp153615_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=403;mismatches=0;indels=0;unknowns=0;Target=comp153615_c1_seq1 403 1 .;CDS_Target=comp153615_c1_seq1 96 1 .;locus=RLOC_00011639
Chr1	stalkie_big_nohaplotig	exon	137735141	137735543	100	+	.	Parent=comp153615_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	137735141	137735236	.	+	0	Parent=comp153615_c1_seq1.mrna2
Chr1	gffcl	locus	137765383	137765985	.	-	.	ID=RLOC_00011640;geneIDs=FBgn0069973.3.path1;transcripts=FBgn0069973.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137765383	137765985	.	-	.	ID=FBgn0069973.3.mrna1;geneID=FBgn0069973.3.path1;Name=FBgn0069973.3;Dir=indeterminatecoverage=98.0;identity=99.3;matches=599;mismatches=4;indels=0;unknowns=0;Target=FBgn0069973.3 603 1 .;locus=RLOC_00011640
Chr1	stalkie_big_nohaplotig	exon	137765383	137765985	99	-	.	Parent=FBgn0069973.3.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137765383	137765985	.	-	0	Parent=FBgn0069973.3.mrna1
Chr1	gffcl	locus	137796596	137798871	.	+	.	ID=RLOC_00011641;geneIDs=ORF1024.path1;transcripts=ORF1024.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137796596	137798871	.	+	.	ID=ORF1024.mrna1;geneID=ORF1024.path1;Name=ORF1024;Dir=sensecoverage=99.8;identity=99.8;matches=1270;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011641
Chr1	stalkie_big_nohaplotig	exon	137796596	137796662	100	+	.	Parent=ORF1024.mrna1;Target=ORF1024 3 69 +
Chr1	stalkie_big_nohaplotig	exon	137796721	137796850	100	+	.	Parent=ORF1024.mrna1;Target=ORF1024 70 199 +
Chr1	stalkie_big_nohaplotig	exon	137797796	137798871	99	+	.	Parent=ORF1024.mrna1;Target=ORF1024 200 1275 +
Chr1	stalkie_big_nohaplotig	CDS	137796597	137796662	.	+	0	Parent=ORF1024.mrna1;Target=ORF1024 4 69 +
Chr1	stalkie_big_nohaplotig	CDS	137796721	137796850	.	+	0	Parent=ORF1024.mrna1;Target=ORF1024 70 199 +
Chr1	stalkie_big_nohaplotig	CDS	137797796	137798871	.	+	2	Parent=ORF1024.mrna1;Target=ORF1024 200 1275 +
Chr1	gffcl	locus	137799044	137848003	.	+	.	ID=RLOC_00011642;geneIDs=comp113810_c0_seq1.path1,comp161772_c0_seq1.path1;transcripts=comp161772_c0_seq1.mrna1,comp113810_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137799044	137848003	.	+	.	ID=comp161772_c0_seq1.mrna1;geneID=comp161772_c0_seq1.path1;Name=comp161772_c0_seq1;Dir=indeterminatecoverage=92.4;identity=97.7;matches=1257;mismatches=29;indels=0;unknowns=0;Target=comp161772_c0_seq1 768 607 .;locus=RLOC_00011642
Chr1	stalkie_big_nohaplotig	exon	137799044	137799055	75	+	.	Parent=comp161772_c0_seq1.mrna1;Target=comp161772_c0_seq1 47 36 .
Chr1	stalkie_big_nohaplotig	exon	137823128	137823133	83	+	.	Parent=comp161772_c0_seq1.mrna1;Target=comp161772_c0_seq1 53 48 .
Chr1	stalkie_big_nohaplotig	exon	137827013	137827018	100	+	.	Parent=comp161772_c0_seq1.mrna1;Target=comp161772_c0_seq1 59 54 .
Chr1	stalkie_big_nohaplotig	exon	137834566	137834569	100	+	.	Parent=comp161772_c0_seq1.mrna1;Target=comp161772_c0_seq1 63 60 .
Chr1	stalkie_big_nohaplotig	exon	137836580	137836581	100	+	.	Parent=comp161772_c0_seq1.mrna1;Target=comp161772_c0_seq1 65 64 .
Chr1	stalkie_big_nohaplotig	exon	137837165	137837167	100	+	.	Parent=comp161772_c0_seq1.mrna1;Target=comp161772_c0_seq1 68 66 .
Chr1	stalkie_big_nohaplotig	exon	137844843	137844847	100	+	.	Parent=comp161772_c0_seq1.mrna1;Target=comp161772_c0_seq1 73 69 .
Chr1	stalkie_big_nohaplotig	exon	137846756	137848003	97	+	.	Parent=comp161772_c0_seq1.mrna1;Target=comp161772_c0_seq1 1321 74 .
Chr1	stalkie_big_nohaplotig	CDS	137847289	137847450	.	+	0	Parent=comp161772_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137836517	137836736	.	+	.	ID=comp113810_c0_seq1.mrna1;geneID=comp113810_c0_seq1.path1;Name=comp113810_c0_seq1;Dir=indeterminatecoverage=97.4;identity=96.9;matches=218;mismatches=1;indels=6;unknowns=0;Target=comp113810_c0_seq1 224 1 .;CDS_Target=comp113810_c0_seq1 24 1 .;locus=RLOC_00011642
Chr1	stalkie_big_nohaplotig	exon	137836517	137836736	96	+	.	Parent=comp113810_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137836517	137836535	.	+	0	Parent=comp113810_c0_seq1.mrna1
Chr1	gffcl	locus	137803184	137805434	.	+	.	ID=RLOC_00011643;geneIDs=ORF1911.path1;transcripts=ORF1911.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137803184	137805434	.	+	.	ID=ORF1911.mrna1;geneID=ORF1911.path1;Name=ORF1911;Dir=sensecoverage=100.0;identity=98.0;matches=944;mismatches=19;indels=0;unknowns=0;locus=RLOC_00011643
Chr1	stalkie_big_nohaplotig	exon	137803184	137803261	97	+	.	Parent=ORF1911.mrna1;Target=ORF1911 1 78 +
Chr1	stalkie_big_nohaplotig	exon	137803344	137803397	100	+	.	Parent=ORF1911.mrna1;Target=ORF1911 79 132 +
Chr1	stalkie_big_nohaplotig	exon	137803453	137803506	92	+	.	Parent=ORF1911.mrna1;Target=ORF1911 133 186 +
Chr1	stalkie_big_nohaplotig	exon	137803566	137803619	96	+	.	Parent=ORF1911.mrna1;Target=ORF1911 187 240 +
Chr1	stalkie_big_nohaplotig	exon	137803679	137803760	100	+	.	Parent=ORF1911.mrna1;Target=ORF1911 241 322 +
Chr1	stalkie_big_nohaplotig	exon	137804794	137805434	98	+	.	Parent=ORF1911.mrna1;Target=ORF1911 323 963 +
Chr1	stalkie_big_nohaplotig	CDS	137803184	137803261	.	+	0	Parent=ORF1911.mrna1;Target=ORF1911 1 78 +
Chr1	stalkie_big_nohaplotig	CDS	137803344	137803397	.	+	0	Parent=ORF1911.mrna1;Target=ORF1911 79 132 +
Chr1	stalkie_big_nohaplotig	CDS	137803453	137803506	.	+	0	Parent=ORF1911.mrna1;Target=ORF1911 133 186 +
Chr1	stalkie_big_nohaplotig	CDS	137803566	137803619	.	+	0	Parent=ORF1911.mrna1;Target=ORF1911 187 240 +
Chr1	stalkie_big_nohaplotig	CDS	137803679	137803760	.	+	0	Parent=ORF1911.mrna1;Target=ORF1911 241 322 +
Chr1	stalkie_big_nohaplotig	CDS	137804794	137805434	.	+	2	Parent=ORF1911.mrna1;Target=ORF1911 323 963 +
Chr1	gffcl	locus	137846129	137846683	.	-	.	ID=RLOC_00011644;geneIDs=comp152095_c0_seq1.path1;transcripts=comp152095_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137846129	137846683	.	-	.	ID=comp152095_c0_seq1.mrna1;geneID=comp152095_c0_seq1.path1;Name=comp152095_c0_seq1;Dir=indeterminatecoverage=97.8;identity=97.2;matches=549;mismatches=6;indels=10;unknowns=0;Target=comp152095_c0_seq1 578 14 .;CDS_Target=comp152095_c0_seq1 319 203 .;locus=RLOC_00011644
Chr1	stalkie_big_nohaplotig	exon	137846129	137846683	97	-	.	Parent=comp152095_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137846378	137846494	.	-	0	Parent=comp152095_c0_seq1.mrna1
Chr1	gffcl	locus	137848038	137848601	.	-	.	ID=RLOC_00011645;geneIDs=comp152150_c0_seq1.path1;transcripts=comp152150_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137848038	137848601	.	-	.	ID=comp152150_c0_seq1.mrna1;geneID=comp152150_c0_seq1.path1;Name=comp152150_c0_seq1;Dir=indeterminatecoverage=92.2;identity=97.0;matches=551;mismatches=12;indels=5;unknowns=0;Target=comp152150_c0_seq1 615 49 .;CDS_Target=comp152150_c0_seq1 213 118 .;locus=RLOC_00011645
Chr1	stalkie_big_nohaplotig	exon	137848038	137848601	97	-	.	Parent=comp152150_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137848438	137848532	.	-	0	Parent=comp152150_c0_seq1.mrna1
Chr1	gffcl	locus	137876500	137879508	.	+	.	ID=RLOC_00011646;geneIDs=FBgn0031174.1.path1;transcripts=FBgn0031174.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137876500	137879508	.	+	.	ID=FBgn0031174.1.mrna1;geneID=FBgn0031174.1.path1;Name=FBgn0031174.1;Dir=sensecoverage=100.0;identity=99.5;matches=2477;mismatches=13;indels=0;unknowns=0;locus=RLOC_00011646
Chr1	stalkie_big_nohaplotig	exon	137876500	137876577	100	+	.	Parent=FBgn0031174.1.mrna1;Target=FBgn0031174.1 1 78 +
Chr1	stalkie_big_nohaplotig	exon	137876634	137877497	99	+	.	Parent=FBgn0031174.1.mrna1;Target=FBgn0031174.1 79 942 +
Chr1	stalkie_big_nohaplotig	exon	137877553	137877624	98	+	.	Parent=FBgn0031174.1.mrna1;Target=FBgn0031174.1 943 1014 +
Chr1	stalkie_big_nohaplotig	exon	137877695	137877898	99	+	.	Parent=FBgn0031174.1.mrna1;Target=FBgn0031174.1 1015 1218 +
Chr1	stalkie_big_nohaplotig	exon	137877957	137878025	98	+	.	Parent=FBgn0031174.1.mrna1;Target=FBgn0031174.1 1219 1287 +
Chr1	stalkie_big_nohaplotig	exon	137878087	137878293	99	+	.	Parent=FBgn0031174.1.mrna1;Target=FBgn0031174.1 1288 1494 +
Chr1	stalkie_big_nohaplotig	exon	137878360	137878875	99	+	.	Parent=FBgn0031174.1.mrna1;Target=FBgn0031174.1 1495 2010 +
Chr1	stalkie_big_nohaplotig	exon	137878942	137879135	99	+	.	Parent=FBgn0031174.1.mrna1;Target=FBgn0031174.1 2011 2204 +
Chr1	stalkie_big_nohaplotig	exon	137879223	137879508	100	+	.	Parent=FBgn0031174.1.mrna1;Target=FBgn0031174.1 2205 2490 +
Chr1	stalkie_big_nohaplotig	CDS	137876500	137876577	.	+	0	Parent=FBgn0031174.1.mrna1;Target=FBgn0031174.1 1 78 +
Chr1	stalkie_big_nohaplotig	CDS	137876634	137877497	.	+	0	Parent=FBgn0031174.1.mrna1;Target=FBgn0031174.1 79 942 +
Chr1	stalkie_big_nohaplotig	CDS	137877553	137877624	.	+	0	Parent=FBgn0031174.1.mrna1;Target=FBgn0031174.1 943 1014 +
Chr1	stalkie_big_nohaplotig	CDS	137877695	137877898	.	+	0	Parent=FBgn0031174.1.mrna1;Target=FBgn0031174.1 1015 1218 +
Chr1	stalkie_big_nohaplotig	CDS	137877957	137878025	.	+	0	Parent=FBgn0031174.1.mrna1;Target=FBgn0031174.1 1219 1287 +
Chr1	stalkie_big_nohaplotig	CDS	137878087	137878293	.	+	0	Parent=FBgn0031174.1.mrna1;Target=FBgn0031174.1 1288 1494 +
Chr1	stalkie_big_nohaplotig	CDS	137878360	137878875	.	+	0	Parent=FBgn0031174.1.mrna1;Target=FBgn0031174.1 1495 2010 +
Chr1	stalkie_big_nohaplotig	CDS	137878942	137879135	.	+	0	Parent=FBgn0031174.1.mrna1;Target=FBgn0031174.1 2011 2204 +
Chr1	stalkie_big_nohaplotig	CDS	137879223	137879508	.	+	1	Parent=FBgn0031174.1.mrna1;Target=FBgn0031174.1 2205 2490 +
Chr1	gffcl	locus	137884220	138614479	.	.	.	ID=RLOC_00011647;geneIDs=FBgn0031264.1.path1,FBgn0031800.1.path1,FBgn0038734.3.path1,FBgn0038734.5.path1,FBgn0260933.1.path1,Dv_FBgn0209556.path1,comp117328_c0_seq1.path1,comp146805_c0_seq1.path1,comp153691_c0_seq1.path1,comp163365_c0_seq1.path1,comp163468_c0_seq1.path1;transcripts=comp146805_c0_seq1.mrna1,FBgn0038734.3.mrna1,comp163365_c0_seq1.mrna1,FBgn0038734.5.mrna1,comp163468_c0_seq1.mrna1,FBgn0031264.1.mrna1,FBgn0260933.1.mrna1,Dv_FBgn0209556.mrna1,FBgn0031800.1.mrna1,comp153691_c0_seq1.mrna1,comp117328_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137884220	138614479	.	+	.	ID=comp146805_c0_seq1.mrna1;geneID=comp146805_c0_seq1.path1;Name=comp146805_c0_seq1;Dir=indeterminatecoverage=86.3;identity=94.7;matches=608;mismatches=14;indels=20;unknowns=0;Target=comp146805_c0_seq1 240 91 .;locus=RLOC_00011647
Chr1	stalkie_big_nohaplotig	exon	137884220	137884641	98	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 425 1 .
Chr1	stalkie_big_nohaplotig	exon	138429124	138429137	78	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 439 426 .
Chr1	stalkie_big_nohaplotig	exon	138444704	138444712	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 448 440 .
Chr1	stalkie_big_nohaplotig	exon	138448500	138448505	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 454 449 .
Chr1	stalkie_big_nohaplotig	exon	138456061	138456066	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 460 455 .
Chr1	stalkie_big_nohaplotig	exon	138464993	138465002	40	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 485 461 .
Chr1	stalkie_big_nohaplotig	exon	138465186	138465195	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 495 486 .
Chr1	stalkie_big_nohaplotig	exon	138481049	138481050	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 497 496 .
Chr1	stalkie_big_nohaplotig	exon	138488540	138488549	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 507 498 .
Chr1	stalkie_big_nohaplotig	exon	138490455	138490457	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 510 508 .
Chr1	stalkie_big_nohaplotig	exon	138490943	138490948	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 516 511 .
Chr1	stalkie_big_nohaplotig	exon	138497066	138497076	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 527 517 .
Chr1	stalkie_big_nohaplotig	exon	138500004	138500011	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 540 533 .
Chr1	stalkie_big_nohaplotig	exon	138513193	138513200	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 548 541 .
Chr1	stalkie_big_nohaplotig	exon	138519230	138519236	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 555 549 .
Chr1	stalkie_big_nohaplotig	exon	138524550	138524558	77	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 564 556 .
Chr1	stalkie_big_nohaplotig	exon	138531977	138531983	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 571 565 .
Chr1	stalkie_big_nohaplotig	exon	138537117	138537121	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 576 572 .
Chr1	stalkie_big_nohaplotig	exon	138542580	138542601	66	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 600 577 .
Chr1	stalkie_big_nohaplotig	exon	138549747	138549750	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 604 601 .
Chr1	stalkie_big_nohaplotig	exon	138556377	138556383	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 611 605 .
Chr1	stalkie_big_nohaplotig	exon	138560132	138560136	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 616 612 .
Chr1	stalkie_big_nohaplotig	exon	138567168	138567175	87	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 624 617 .
Chr1	stalkie_big_nohaplotig	exon	138572241	138572245	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 629 625 .
Chr1	stalkie_big_nohaplotig	exon	138576340	138576341	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 631 630 .
Chr1	stalkie_big_nohaplotig	exon	138591982	138591986	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 636 632 .
Chr1	stalkie_big_nohaplotig	exon	138599908	138599912	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 641 637 .
Chr1	stalkie_big_nohaplotig	exon	138614273	138614276	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 645 642 .
Chr1	stalkie_big_nohaplotig	exon	138614478	138614479	100	+	.	Parent=comp146805_c0_seq1.mrna1;Target=comp146805_c0_seq1 647 646 .
Chr1	stalkie_big_nohaplotig	CDS	137884310	137884456	.	+	0	Parent=comp146805_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138441949	138444972	.	+	.	ID=FBgn0038734.3.mrna1;geneID=FBgn0038734.3.path1;Name=FBgn0038734.3;Dir=sensecoverage=99.3;identity=99.4;matches=1510;mismatches=9;indels=0;unknowns=0;locus=RLOC_00011647
Chr1	stalkie_big_nohaplotig	exon	138441949	138442122	100	+	.	Parent=FBgn0038734.3.mrna1;Target=FBgn0038734.3 1 174 +
Chr1	stalkie_big_nohaplotig	exon	138443352	138443559	99	+	.	Parent=FBgn0038734.3.mrna1;Target=FBgn0038734.3 175 382 +
Chr1	stalkie_big_nohaplotig	exon	138443628	138443820	100	+	.	Parent=FBgn0038734.3.mrna1;Target=FBgn0038734.3 383 575 +
Chr1	stalkie_big_nohaplotig	exon	138443957	138444076	99	+	.	Parent=FBgn0038734.3.mrna1;Target=FBgn0038734.3 576 695 +
Chr1	stalkie_big_nohaplotig	exon	138444149	138444972	99	+	.	Parent=FBgn0038734.3.mrna1;Target=FBgn0038734.3 696 1519 +
Chr1	stalkie_big_nohaplotig	CDS	138441949	138442122	.	+	0	Parent=FBgn0038734.3.mrna1;Target=FBgn0038734.3 1 174 +
Chr1	stalkie_big_nohaplotig	CDS	138443352	138443559	.	+	0	Parent=FBgn0038734.3.mrna1;Target=FBgn0038734.3 175 382 +
Chr1	stalkie_big_nohaplotig	CDS	138443628	138443820	.	+	2	Parent=FBgn0038734.3.mrna1;Target=FBgn0038734.3 383 575 +
Chr1	stalkie_big_nohaplotig	CDS	138443957	138444076	.	+	1	Parent=FBgn0038734.3.mrna1;Target=FBgn0038734.3 576 695 +
Chr1	stalkie_big_nohaplotig	CDS	138444149	138444971	.	+	1	Parent=FBgn0038734.3.mrna1;Target=FBgn0038734.3 696 1518 +
Chr1	stalkie_big_nohaplotig	mRNA	138447899	138457010	.	+	.	ID=comp163365_c0_seq1.mrna1;geneID=comp163365_c0_seq1.path1;Name=comp163365_c0_seq1;Dir=antisensecoverage=100.0;identity=98.8;matches=2852;mismatches=32;indels=2;unknowns=0;locus=RLOC_00011647
Chr1	stalkie_big_nohaplotig	exon	138447899	138447979	98	+	.	Parent=comp163365_c0_seq1.mrna1;Target=comp163365_c0_seq1 2806 2886 -
Chr1	stalkie_big_nohaplotig	exon	138448794	138448999	99	+	.	Parent=comp163365_c0_seq1.mrna1;Target=comp163365_c0_seq1 2600 2805 -
Chr1	stalkie_big_nohaplotig	exon	138454221	138454428	99	+	.	Parent=comp163365_c0_seq1.mrna1;Target=comp163365_c0_seq1 2392 2599 -
Chr1	stalkie_big_nohaplotig	exon	138454496	138454688	99	+	.	Parent=comp163365_c0_seq1.mrna1;Target=comp163365_c0_seq1 2199 2391 -
Chr1	stalkie_big_nohaplotig	exon	138454755	138454877	100	+	.	Parent=comp163365_c0_seq1.mrna1;Target=comp163365_c0_seq1 2076 2198 -
Chr1	stalkie_big_nohaplotig	exon	138454938	138457010	98	+	.	Parent=comp163365_c0_seq1.mrna1;Target=comp163365_c0_seq1 1 2075 -
Chr1	stalkie_big_nohaplotig	CDS	138448856	138448999	.	+	0	Parent=comp163365_c0_seq1.mrna1;Target=comp163365_c0_seq1 2600 2743 .
Chr1	stalkie_big_nohaplotig	CDS	138454221	138454428	.	+	0	Parent=comp163365_c0_seq1.mrna1;Target=comp163365_c0_seq1 2392 2599 .
Chr1	stalkie_big_nohaplotig	CDS	138454496	138454688	.	+	2	Parent=comp163365_c0_seq1.mrna1;Target=comp163365_c0_seq1 2199 2391 .
Chr1	stalkie_big_nohaplotig	CDS	138454755	138454877	.	+	1	Parent=comp163365_c0_seq1.mrna1;Target=comp163365_c0_seq1 2076 2198 .
Chr1	stalkie_big_nohaplotig	CDS	138454938	138455898	.	+	1	Parent=comp163365_c0_seq1.mrna1;Target=comp163365_c0_seq1 1115 2075 .
Chr1	stalkie_big_nohaplotig	mRNA	138452388	138455895	.	+	.	ID=FBgn0038734.5.mrna1;geneID=FBgn0038734.5.path1;Name=FBgn0038734.5;Dir=sensecoverage=100.0;identity=99.1;matches=1627;mismatches=14;indels=0;unknowns=0;locus=RLOC_00011647
Chr1	stalkie_big_nohaplotig	exon	138452388	138452546	99	+	.	Parent=FBgn0038734.5.mrna1;Target=FBgn0038734.5 1 159 +
Chr1	stalkie_big_nohaplotig	exon	138454221	138454428	99	+	.	Parent=FBgn0038734.5.mrna1;Target=FBgn0038734.5 160 367 +
Chr1	stalkie_big_nohaplotig	exon	138454496	138454688	99	+	.	Parent=FBgn0038734.5.mrna1;Target=FBgn0038734.5 368 560 +
Chr1	stalkie_big_nohaplotig	exon	138454755	138454877	100	+	.	Parent=FBgn0038734.5.mrna1;Target=FBgn0038734.5 561 683 +
Chr1	stalkie_big_nohaplotig	exon	138454938	138455895	98	+	.	Parent=FBgn0038734.5.mrna1;Target=FBgn0038734.5 684 1641 +
Chr1	stalkie_big_nohaplotig	CDS	138452388	138452546	.	+	0	Parent=FBgn0038734.5.mrna1;Target=FBgn0038734.5 1 159 +
Chr1	stalkie_big_nohaplotig	CDS	138454221	138454428	.	+	0	Parent=FBgn0038734.5.mrna1;Target=FBgn0038734.5 160 367 +
Chr1	stalkie_big_nohaplotig	CDS	138454496	138454688	.	+	2	Parent=FBgn0038734.5.mrna1;Target=FBgn0038734.5 368 560 +
Chr1	stalkie_big_nohaplotig	CDS	138454755	138454877	.	+	1	Parent=FBgn0038734.5.mrna1;Target=FBgn0038734.5 561 683 +
Chr1	stalkie_big_nohaplotig	CDS	138454938	138455895	.	+	1	Parent=FBgn0038734.5.mrna1;Target=FBgn0038734.5 684 1641 +
Chr1	stalkie_big_nohaplotig	mRNA	138461006	138469434	.	+	.	ID=comp163468_c0_seq1.mrna1;geneID=comp163468_c0_seq1.path1;Name=comp163468_c0_seq1;Dir=sensecoverage=98.4;identity=98.2;matches=5108;mismatches=53;indels=42;unknowns=0;Target=comp163468_c0_seq1 1353 4829 +;locus=RLOC_00011647
Chr1	stalkie_big_nohaplotig	exon	138461006	138461189	98	+	.	Parent=comp163468_c0_seq1.mrna1;Target=comp163468_c0_seq1 1 184 +
Chr1	stalkie_big_nohaplotig	exon	138461251	138461546	99	+	.	Parent=comp163468_c0_seq1.mrna1;Target=comp163468_c0_seq1 185 480 +
Chr1	stalkie_big_nohaplotig	exon	138461609	138461983	98	+	.	Parent=comp163468_c0_seq1.mrna1;Target=comp163468_c0_seq1 481 855 +
Chr1	stalkie_big_nohaplotig	exon	138465059	138465547	99	+	.	Parent=comp163468_c0_seq1.mrna1;Target=comp163468_c0_seq1 856 1344 +
Chr1	stalkie_big_nohaplotig	exon	138465618	138469434	97	+	.	Parent=comp163468_c0_seq1.mrna1;Target=comp163468_c0_seq1 1345 5203 +
Chr1	stalkie_big_nohaplotig	CDS	138465626	138469060	.	+	0	Parent=comp163468_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138465535	138469057	.	+	.	ID=FBgn0031264.1.mrna1;geneID=FBgn0031264.1.path1;Name=FBgn0031264.1;Dir=sensecoverage=100.0;identity=97.6;matches=3328;mismatches=41;indels=42;unknowns=0;locus=RLOC_00011647
Chr1	stalkie_big_nohaplotig	exon	138465535	138465547	100	+	.	Parent=FBgn0031264.1.mrna1;Target=FBgn0031264.1 1 13 +
Chr1	stalkie_big_nohaplotig	exon	138465618	138468029	97	+	.	Parent=FBgn0031264.1.mrna1;Target=FBgn0031264.1 14 2464 +
Chr1	stalkie_big_nohaplotig	exon	138468114	138469057	98	+	.	Parent=FBgn0031264.1.mrna1;Target=FBgn0031264.1 2465 3411 +
Chr1	stalkie_big_nohaplotig	CDS	138465535	138465547	.	+	0	Parent=FBgn0031264.1.mrna1;Target=FBgn0031264.1 1 13 +
Chr1	stalkie_big_nohaplotig	CDS	138465618	138468029	.	+	2	Parent=FBgn0031264.1.mrna1;Target=FBgn0031264.1 14 2464 +
Chr1	stalkie_big_nohaplotig	CDS	138468114	138469057	.	+	2	Parent=FBgn0031264.1.mrna1;Target=FBgn0031264.1 2465 3411 +
Chr1	stalkie_big_nohaplotig	mRNA	138478434	138481986	.	+	.	ID=FBgn0260933.1.mrna1;geneID=FBgn0260933.1.path1;Name=FBgn0260933.1;Dir=sensecoverage=91.5;identity=99.0;matches=3093;mismatches=32;indels=0;unknowns=0;locus=RLOC_00011647
Chr1	stalkie_big_nohaplotig	exon	138478434	138478725	98	+	.	Parent=FBgn0260933.1.mrna1;Target=FBgn0260933.1 3 294 +
Chr1	stalkie_big_nohaplotig	exon	138478794	138479217	99	+	.	Parent=FBgn0260933.1.mrna1;Target=FBgn0260933.1 295 718 +
Chr1	stalkie_big_nohaplotig	exon	138479276	138479582	99	+	.	Parent=FBgn0260933.1.mrna1;Target=FBgn0260933.1 719 1025 +
Chr1	stalkie_big_nohaplotig	exon	138479647	138479908	98	+	.	Parent=FBgn0260933.1.mrna1;Target=FBgn0260933.1 1026 1287 +
Chr1	stalkie_big_nohaplotig	exon	138479966	138480394	98	+	.	Parent=FBgn0260933.1.mrna1;Target=FBgn0260933.1 1288 1716 +
Chr1	stalkie_big_nohaplotig	exon	138480456	138480632	98	+	.	Parent=FBgn0260933.1.mrna1;Target=FBgn0260933.1 1717 1893 +
Chr1	stalkie_big_nohaplotig	exon	138480695	138480817	97	+	.	Parent=FBgn0260933.1.mrna1;Target=FBgn0260933.1 1894 2016 +
Chr1	stalkie_big_nohaplotig	exon	138480876	138481986	99	+	.	Parent=FBgn0260933.1.mrna1;Target=FBgn0260933.1 2017 3127 +
Chr1	stalkie_big_nohaplotig	CDS	138478435	138478725	.	+	0	Parent=FBgn0260933.1.mrna1;Target=FBgn0260933.1 4 294 +
Chr1	stalkie_big_nohaplotig	CDS	138478794	138479217	.	+	0	Parent=FBgn0260933.1.mrna1;Target=FBgn0260933.1 295 718 +
Chr1	stalkie_big_nohaplotig	CDS	138479276	138479582	.	+	2	Parent=FBgn0260933.1.mrna1;Target=FBgn0260933.1 719 1025 +
Chr1	stalkie_big_nohaplotig	CDS	138479647	138479908	.	+	1	Parent=FBgn0260933.1.mrna1;Target=FBgn0260933.1 1026 1287 +
Chr1	stalkie_big_nohaplotig	CDS	138479966	138480394	.	+	0	Parent=FBgn0260933.1.mrna1;Target=FBgn0260933.1 1288 1716 +
Chr1	stalkie_big_nohaplotig	CDS	138480456	138480632	.	+	0	Parent=FBgn0260933.1.mrna1;Target=FBgn0260933.1 1717 1893 +
Chr1	stalkie_big_nohaplotig	CDS	138480695	138480817	.	+	0	Parent=FBgn0260933.1.mrna1;Target=FBgn0260933.1 1894 2016 +
Chr1	stalkie_big_nohaplotig	CDS	138480876	138481985	.	+	0	Parent=FBgn0260933.1.mrna1;Target=FBgn0260933.1 2017 3126 +
Chr1	stalkie_big_nohaplotig	mRNA	138519055	138519439	.	+	.	ID=Dv_FBgn0209556.mrna1;geneID=Dv_FBgn0209556.path1;Name=Dv_FBgn0209556;Dir=sensecoverage=94.0;identity=99.1;matches=324;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011647
Chr1	stalkie_big_nohaplotig	exon	138519055	138519290	98	+	.	Parent=Dv_FBgn0209556.mrna1;Target=Dv_FBgn0209556 1 236 +
Chr1	stalkie_big_nohaplotig	exon	138519349	138519439	100	+	.	Parent=Dv_FBgn0209556.mrna1;Target=Dv_FBgn0209556 237 327 +
Chr1	stalkie_big_nohaplotig	CDS	138519055	138519290	.	+	0	Parent=Dv_FBgn0209556.mrna1;Target=Dv_FBgn0209556 1 236 +
Chr1	stalkie_big_nohaplotig	CDS	138519349	138519439	.	+	1	Parent=Dv_FBgn0209556.mrna1;Target=Dv_FBgn0209556 237 327 +
Chr1	stalkie_big_nohaplotig	mRNA	138536133	138539346	.	-	.	ID=FBgn0031800.1.mrna1;geneID=FBgn0031800.1.path1;Name=FBgn0031800.1;Dir=sensecoverage=100.0;identity=98.8;matches=1260;mismatches=15;indels=0;unknowns=0;locus=RLOC_00011647
Chr1	stalkie_big_nohaplotig	exon	138536133	138536846	99	-	.	Parent=FBgn0031800.1.mrna1;Target=FBgn0031800.1 562 1275 +
Chr1	stalkie_big_nohaplotig	exon	138536939	138537107	99	-	.	Parent=FBgn0031800.1.mrna1;Target=FBgn0031800.1 393 561 +
Chr1	stalkie_big_nohaplotig	exon	138538955	138539346	97	-	.	Parent=FBgn0031800.1.mrna1;Target=FBgn0031800.1 1 392 +
Chr1	stalkie_big_nohaplotig	CDS	138536133	138536846	.	-	0	Parent=FBgn0031800.1.mrna1;Target=FBgn0031800.1 562 1275 +
Chr1	stalkie_big_nohaplotig	CDS	138536939	138537107	.	-	1	Parent=FBgn0031800.1.mrna1;Target=FBgn0031800.1 393 561 +
Chr1	stalkie_big_nohaplotig	CDS	138538955	138539346	.	-	0	Parent=FBgn0031800.1.mrna1;Target=FBgn0031800.1 1 392 +
Chr1	stalkie_big_nohaplotig	mRNA	138537086	138537675	.	+	.	ID=comp153691_c0_seq1.mrna1;geneID=comp153691_c0_seq1.path1;Name=comp153691_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.0;matches=572;mismatches=14;indels=16;unknowns=0;Target=comp153691_c0_seq1 598 1 .;CDS_Target=comp153691_c0_seq1 458 429 .;locus=RLOC_00011647
Chr1	stalkie_big_nohaplotig	exon	138537086	138537675	95	+	.	Parent=comp153691_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138537516	138537534	.	+	0	Parent=comp153691_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138556355	138556569	.	+	.	ID=comp117328_c0_seq1.mrna1;geneID=comp117328_c0_seq1.path1;Name=comp117328_c0_seq1;Dir=indeterminatecoverage=27.0;identity=86.8;matches=191;mismatches=20;indels=9;unknowns=0;Target=comp117328_c0_seq1 231 16 .;CDS_Target=comp117328_c0_seq1 45 16 .;locus=RLOC_00011647
Chr1	stalkie_big_nohaplotig	exon	138556355	138556569	86	+	.	Parent=comp117328_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138556355	138556383	.	+	0	Parent=comp117328_c0_seq1.mrna1
Chr1	gffcl	locus	137886299	137887546	.	+	.	ID=RLOC_00011648;geneIDs=comp161772_c0_seq1.path2;transcripts=comp161772_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	137886299	137887546	.	+	.	ID=comp161772_c0_seq1.mrna2;geneID=comp161772_c0_seq1.path2;Name=comp161772_c0_seq1;Dir=indeterminatecoverage=89.7;identity=98.0;matches=1223;mismatches=25;indels=0;unknowns=0;Target=comp161772_c0_seq1 1321 74 .;CDS_Target=comp161772_c0_seq1 768 607 .;locus=RLOC_00011648
Chr1	stalkie_big_nohaplotig	exon	137886299	137887546	97	+	.	Parent=comp161772_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	137886832	137886993	.	+	0	Parent=comp161772_c0_seq1.mrna2
Chr1	gffcl	locus	137887581	137888144	.	-	.	ID=RLOC_00011649;geneIDs=comp152150_c0_seq1.path2;transcripts=comp152150_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	137887581	137888144	.	-	.	ID=comp152150_c0_seq1.mrna2;geneID=comp152150_c0_seq1.path2;Name=comp152150_c0_seq1;Dir=indeterminatecoverage=92.2;identity=97.0;matches=551;mismatches=12;indels=5;unknowns=0;Target=comp152150_c0_seq1 615 49 .;CDS_Target=comp152150_c0_seq1 213 118 .;locus=RLOC_00011649
Chr1	stalkie_big_nohaplotig	exon	137887581	137888144	97	-	.	Parent=comp152150_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	137887981	137888075	.	-	0	Parent=comp152150_c0_seq1.mrna2
Chr1	gffcl	locus	137888536	137889152	.	+	.	ID=RLOC_00011650;geneIDs=comp156864_c1_seq1.path1;transcripts=comp156864_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137888536	137889152	.	+	.	ID=comp156864_c1_seq1.mrna1;geneID=comp156864_c1_seq1.path1;Name=comp156864_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=614;mismatches=1;indels=2;unknowns=0;Target=comp156864_c1_seq1 615 1 .;CDS_Target=comp156864_c1_seq1 388 302 .;locus=RLOC_00011650
Chr1	stalkie_big_nohaplotig	exon	137888536	137889152	99	+	.	Parent=comp156864_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137888837	137888925	.	+	0	Parent=comp156864_c1_seq1.mrna1
Chr1	gffcl	locus	137893096	137898127	.	-	.	ID=RLOC_00011651;geneIDs=FBgn0015558.1.path1;transcripts=FBgn0015558.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137893096	137898127	.	-	.	ID=FBgn0015558.1.mrna1;geneID=FBgn0015558.1.path1;Name=FBgn0015558.1;Dir=sensecoverage=100.0;identity=99.7;matches=1642;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011651
Chr1	stalkie_big_nohaplotig	exon	137893096	137893163	100	-	.	Parent=FBgn0015558.1.mrna1;Target=FBgn0015558.1 1580 1647 +
Chr1	stalkie_big_nohaplotig	exon	137893294	137893463	99	-	.	Parent=FBgn0015558.1.mrna1;Target=FBgn0015558.1 1410 1579 +
Chr1	stalkie_big_nohaplotig	exon	137893521	137894284	99	-	.	Parent=FBgn0015558.1.mrna1;Target=FBgn0015558.1 646 1409 +
Chr1	stalkie_big_nohaplotig	exon	137894346	137894653	99	-	.	Parent=FBgn0015558.1.mrna1;Target=FBgn0015558.1 338 645 +
Chr1	stalkie_big_nohaplotig	exon	137895951	137896128	99	-	.	Parent=FBgn0015558.1.mrna1;Target=FBgn0015558.1 160 337 +
Chr1	stalkie_big_nohaplotig	exon	137897969	137898127	100	-	.	Parent=FBgn0015558.1.mrna1;Target=FBgn0015558.1 1 159 +
Chr1	stalkie_big_nohaplotig	CDS	137893096	137893163	.	-	2	Parent=FBgn0015558.1.mrna1;Target=FBgn0015558.1 1580 1647 +
Chr1	stalkie_big_nohaplotig	CDS	137893294	137893463	.	-	1	Parent=FBgn0015558.1.mrna1;Target=FBgn0015558.1 1410 1579 +
Chr1	stalkie_big_nohaplotig	CDS	137893521	137894284	.	-	0	Parent=FBgn0015558.1.mrna1;Target=FBgn0015558.1 646 1409 +
Chr1	stalkie_big_nohaplotig	CDS	137894346	137894653	.	-	2	Parent=FBgn0015558.1.mrna1;Target=FBgn0015558.1 338 645 +
Chr1	stalkie_big_nohaplotig	CDS	137895951	137896128	.	-	0	Parent=FBgn0015558.1.mrna1;Target=FBgn0015558.1 160 337 +
Chr1	stalkie_big_nohaplotig	CDS	137897969	137898127	.	-	0	Parent=FBgn0015558.1.mrna1;Target=FBgn0015558.1 1 159 +
Chr1	gffcl	locus	137905655	137906745	.	+	.	ID=RLOC_00011652;geneIDs=FBgn0002787.1.path1;transcripts=FBgn0002787.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137905655	137906745	.	+	.	ID=FBgn0002787.1.mrna1;geneID=FBgn0002787.1.path1;Name=FBgn0002787.1;Dir=sensecoverage=100.0;identity=100.0;matches=999;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011652
Chr1	stalkie_big_nohaplotig	exon	137905655	137905829	100	+	.	Parent=FBgn0002787.1.mrna1;Target=FBgn0002787.1 1 175 +
Chr1	stalkie_big_nohaplotig	exon	137905922	137906745	100	+	.	Parent=FBgn0002787.1.mrna1;Target=FBgn0002787.1 176 999 +
Chr1	stalkie_big_nohaplotig	CDS	137905655	137905829	.	+	0	Parent=FBgn0002787.1.mrna1;Target=FBgn0002787.1 1 175 +
Chr1	stalkie_big_nohaplotig	CDS	137905922	137906745	.	+	2	Parent=FBgn0002787.1.mrna1;Target=FBgn0002787.1 176 999 +
Chr1	gffcl	locus	137907178	137907520	.	+	.	ID=RLOC_00011653;geneIDs=comp119237_c0_seq1.path1;transcripts=comp119237_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137907178	137907520	.	+	.	ID=comp119237_c0_seq1.mrna1;geneID=comp119237_c0_seq1.path1;Name=comp119237_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.5;matches=332;mismatches=11;indels=1;unknowns=0;Target=comp119237_c0_seq1 344 1 .;CDS_Target=comp119237_c0_seq1 56 3 .;locus=RLOC_00011653
Chr1	stalkie_big_nohaplotig	exon	137907178	137907520	96	+	.	Parent=comp119237_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137907180	137907232	.	+	0	Parent=comp119237_c0_seq1.mrna1
Chr1	gffcl	locus	137907679	137909697	.	-	.	ID=RLOC_00011654;geneIDs=FBgn0038576.1.path1;transcripts=FBgn0038576.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137907679	137909697	.	-	.	ID=FBgn0038576.1.mrna1;geneID=FBgn0038576.1.path1;Name=FBgn0038576.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=2009;mismatches=10;indels=0;unknowns=0;Target=FBgn0038576.1 2019 1 .;locus=RLOC_00011654
Chr1	stalkie_big_nohaplotig	exon	137907679	137909697	99	-	.	Parent=FBgn0038576.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137907679	137909697	.	-	0	Parent=FBgn0038576.1.mrna1
Chr1	gffcl	locus	137909949	137917715	.	+	.	ID=RLOC_00011655;geneIDs=FBgn0022153.1.path1;transcripts=FBgn0022153.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137909949	137917715	.	+	.	ID=FBgn0022153.1.mrna1;geneID=FBgn0022153.1.path1;Name=FBgn0022153.1;Dir=sensecoverage=100.0;identity=99.9;matches=4310;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011655
Chr1	stalkie_big_nohaplotig	exon	137909949	137910103	100	+	.	Parent=FBgn0022153.1.mrna1;Target=FBgn0022153.1 1 155 +
Chr1	stalkie_big_nohaplotig	exon	137910162	137910795	100	+	.	Parent=FBgn0022153.1.mrna1;Target=FBgn0022153.1 156 789 +
Chr1	stalkie_big_nohaplotig	exon	137910866	137911589	100	+	.	Parent=FBgn0022153.1.mrna1;Target=FBgn0022153.1 790 1513 +
Chr1	stalkie_big_nohaplotig	exon	137912913	137913072	100	+	.	Parent=FBgn0022153.1.mrna1;Target=FBgn0022153.1 1514 1673 +
Chr1	stalkie_big_nohaplotig	exon	137914333	137914429	100	+	.	Parent=FBgn0022153.1.mrna1;Target=FBgn0022153.1 1674 1770 +
Chr1	stalkie_big_nohaplotig	exon	137914493	137916592	99	+	.	Parent=FBgn0022153.1.mrna1;Target=FBgn0022153.1 1771 3870 +
Chr1	stalkie_big_nohaplotig	exon	137916658	137916781	100	+	.	Parent=FBgn0022153.1.mrna1;Target=FBgn0022153.1 3871 3994 +
Chr1	stalkie_big_nohaplotig	exon	137917331	137917580	99	+	.	Parent=FBgn0022153.1.mrna1;Target=FBgn0022153.1 3995 4244 +
Chr1	stalkie_big_nohaplotig	exon	137917646	137917715	100	+	.	Parent=FBgn0022153.1.mrna1;Target=FBgn0022153.1 4245 4314 +
Chr1	stalkie_big_nohaplotig	CDS	137909949	137910103	.	+	0	Parent=FBgn0022153.1.mrna1;Target=FBgn0022153.1 1 155 +
Chr1	stalkie_big_nohaplotig	CDS	137910162	137910795	.	+	1	Parent=FBgn0022153.1.mrna1;Target=FBgn0022153.1 156 789 +
Chr1	stalkie_big_nohaplotig	CDS	137910866	137911589	.	+	0	Parent=FBgn0022153.1.mrna1;Target=FBgn0022153.1 790 1513 +
Chr1	stalkie_big_nohaplotig	CDS	137912913	137913072	.	+	2	Parent=FBgn0022153.1.mrna1;Target=FBgn0022153.1 1514 1673 +
Chr1	stalkie_big_nohaplotig	CDS	137914333	137914429	.	+	1	Parent=FBgn0022153.1.mrna1;Target=FBgn0022153.1 1674 1770 +
Chr1	stalkie_big_nohaplotig	CDS	137914493	137916592	.	+	0	Parent=FBgn0022153.1.mrna1;Target=FBgn0022153.1 1771 3870 +
Chr1	stalkie_big_nohaplotig	CDS	137916658	137916781	.	+	0	Parent=FBgn0022153.1.mrna1;Target=FBgn0022153.1 3871 3994 +
Chr1	stalkie_big_nohaplotig	CDS	137917331	137917580	.	+	2	Parent=FBgn0022153.1.mrna1;Target=FBgn0022153.1 3995 4244 +
Chr1	stalkie_big_nohaplotig	CDS	137917646	137917715	.	+	1	Parent=FBgn0022153.1.mrna1;Target=FBgn0022153.1 4245 4314 +
Chr1	gffcl	locus	137918148	137956192	.	-	.	ID=RLOC_00011656;geneIDs=FBgn0052626.1.path1,comp148546_c0_seq1.path1,comp161564_c1_seq1.path1;transcripts=comp161564_c1_seq1.mrna1,FBgn0052626.1.mrna1,comp148546_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137918148	137941670	.	-	.	ID=comp161564_c1_seq1.mrna1;geneID=comp161564_c1_seq1.path1;Name=comp161564_c1_seq1;Dir=antisensecoverage=93.7;identity=99.0;matches=3348;mismatches=27;indels=8;unknowns=0;locus=RLOC_00011656
Chr1	stalkie_big_nohaplotig	exon	137918148	137918869	98	-	.	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 2 724 -
Chr1	stalkie_big_nohaplotig	exon	137919029	137919139	98	-	.	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 725 835 -
Chr1	stalkie_big_nohaplotig	exon	137920149	137920443	99	-	.	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 836 1130 -
Chr1	stalkie_big_nohaplotig	exon	137920504	137920794	100	-	.	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 1131 1421 -
Chr1	stalkie_big_nohaplotig	exon	137920857	137921020	100	-	.	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 1422 1585 -
Chr1	stalkie_big_nohaplotig	exon	137921121	137921451	99	-	.	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 1586 1916 -
Chr1	stalkie_big_nohaplotig	exon	137921515	137921640	100	-	.	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 1917 2042 -
Chr1	stalkie_big_nohaplotig	exon	137921718	137921812	98	-	.	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 2043 2137 -
Chr1	stalkie_big_nohaplotig	exon	137921868	137921983	100	-	.	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 2138 2253 -
Chr1	stalkie_big_nohaplotig	exon	137924308	137924349	100	-	.	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 2254 2295 -
Chr1	stalkie_big_nohaplotig	exon	137924797	137925098	99	-	.	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 2296 2597 -
Chr1	stalkie_big_nohaplotig	exon	137934352	137934517	100	-	.	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 2598 2763 -
Chr1	stalkie_big_nohaplotig	exon	137940997	137941312	98	-	.	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 2764 3079 -
Chr1	stalkie_big_nohaplotig	exon	137941366	137941670	96	-	.	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 3080 3377 -
Chr1	stalkie_big_nohaplotig	CDS	137918702	137918869	.	-	0	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 557 724 .
Chr1	stalkie_big_nohaplotig	CDS	137919029	137919139	.	-	0	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 725 835 .
Chr1	stalkie_big_nohaplotig	CDS	137920149	137920443	.	-	1	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 836 1130 .
Chr1	stalkie_big_nohaplotig	CDS	137920504	137920794	.	-	1	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 1131 1421 .
Chr1	stalkie_big_nohaplotig	CDS	137920857	137921020	.	-	0	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 1422 1585 .
Chr1	stalkie_big_nohaplotig	CDS	137921121	137921451	.	-	1	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 1586 1916 .
Chr1	stalkie_big_nohaplotig	CDS	137921515	137921640	.	-	1	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 1917 2042 .
Chr1	stalkie_big_nohaplotig	CDS	137921718	137921812	.	-	0	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 2043 2137 .
Chr1	stalkie_big_nohaplotig	CDS	137921868	137921983	.	-	2	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 2138 2253 .
Chr1	stalkie_big_nohaplotig	CDS	137924308	137924349	.	-	2	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 2254 2295 .
Chr1	stalkie_big_nohaplotig	CDS	137924797	137925098	.	-	1	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 2296 2597 .
Chr1	stalkie_big_nohaplotig	CDS	137934352	137934517	.	-	2	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 2598 2763 .
Chr1	stalkie_big_nohaplotig	CDS	137940997	137941129	.	-	0	Parent=comp161564_c1_seq1.mrna1;Target=comp161564_c1_seq1 2764 2896 .
Chr1	stalkie_big_nohaplotig	mRNA	137918705	137956192	.	-	.	ID=FBgn0052626.1.mrna1;geneID=FBgn0052626.1.path1;Name=FBgn0052626.1;Dir=sensecoverage=99.9;identity=99.6;matches=2273;mismatches=10;indels=0;unknowns=0;locus=RLOC_00011656
Chr1	stalkie_big_nohaplotig	exon	137918705	137918869	100	-	.	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 2122 2286 +
Chr1	stalkie_big_nohaplotig	exon	137919029	137919139	98	-	.	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 2011 2121 +
Chr1	stalkie_big_nohaplotig	exon	137920149	137920443	99	-	.	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 1716 2010 +
Chr1	stalkie_big_nohaplotig	exon	137920504	137920794	100	-	.	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 1425 1715 +
Chr1	stalkie_big_nohaplotig	exon	137920857	137921020	100	-	.	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 1261 1424 +
Chr1	stalkie_big_nohaplotig	exon	137921121	137921451	99	-	.	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 930 1260 +
Chr1	stalkie_big_nohaplotig	exon	137921515	137921640	100	-	.	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 804 929 +
Chr1	stalkie_big_nohaplotig	exon	137921718	137921812	98	-	.	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 709 803 +
Chr1	stalkie_big_nohaplotig	exon	137921868	137921983	100	-	.	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 593 708 +
Chr1	stalkie_big_nohaplotig	exon	137924797	137925098	99	-	.	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 291 592 +
Chr1	stalkie_big_nohaplotig	exon	137934352	137934517	100	-	.	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 125 290 +
Chr1	stalkie_big_nohaplotig	exon	137956072	137956192	99	-	.	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 4 124 +
Chr1	stalkie_big_nohaplotig	CDS	137918705	137918869	.	-	0	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 2122 2286 +
Chr1	stalkie_big_nohaplotig	CDS	137919029	137919139	.	-	0	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 2011 2121 +
Chr1	stalkie_big_nohaplotig	CDS	137920149	137920443	.	-	1	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 1716 2010 +
Chr1	stalkie_big_nohaplotig	CDS	137920504	137920794	.	-	1	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 1425 1715 +
Chr1	stalkie_big_nohaplotig	CDS	137920857	137921020	.	-	0	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 1261 1424 +
Chr1	stalkie_big_nohaplotig	CDS	137921121	137921451	.	-	1	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 930 1260 +
Chr1	stalkie_big_nohaplotig	CDS	137921515	137921640	.	-	1	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 804 929 +
Chr1	stalkie_big_nohaplotig	CDS	137921718	137921812	.	-	0	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 709 803 +
Chr1	stalkie_big_nohaplotig	CDS	137921868	137921983	.	-	2	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 593 708 +
Chr1	stalkie_big_nohaplotig	CDS	137924797	137925098	.	-	1	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 291 592 +
Chr1	stalkie_big_nohaplotig	CDS	137934352	137934517	.	-	2	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 125 290 +
Chr1	stalkie_big_nohaplotig	CDS	137956072	137956192	.	-	0	Parent=FBgn0052626.1.mrna1;Target=FBgn0052626.1 4 124 +
Chr1	stalkie_big_nohaplotig	mRNA	137925078	137925737	.	-	.	ID=comp148546_c0_seq1.mrna1;geneID=comp148546_c0_seq1.path1;Name=comp148546_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=367;mismatches=1;indels=3;unknowns=0;Target=comp148546_c0_seq1 297 368 .;locus=RLOC_00011656
Chr1	stalkie_big_nohaplotig	exon	137925078	137925098	100	-	.	Parent=comp148546_c0_seq1.mrna1;Target=comp148546_c0_seq1 1 21 -
Chr1	stalkie_big_nohaplotig	exon	137925388	137925737	98	-	.	Parent=comp148546_c0_seq1.mrna1;Target=comp148546_c0_seq1 22 368 -
Chr1	stalkie_big_nohaplotig	CDS	137925663	137925737	.	-	0	Parent=comp148546_c0_seq1.mrna1
Chr1	gffcl	locus	137922396	137924186	.	+	.	ID=RLOC_00011657;geneIDs=comp162305_c0_seq1.path1;transcripts=comp162305_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137922396	137924186	.	+	.	ID=comp162305_c0_seq1.mrna1;geneID=comp162305_c0_seq1.path1;Name=comp162305_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.0;matches=1751;mismatches=29;indels=44;unknowns=0;Target=comp162305_c0_seq1 1813 1 .;CDS_Target=comp162305_c0_seq1 1229 1155 .;locus=RLOC_00011657
Chr1	stalkie_big_nohaplotig	exon	137922396	137924186	95	+	.	Parent=comp162305_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137923548	137923623	.	+	0	Parent=comp162305_c0_seq1.mrna1
Chr1	gffcl	locus	137925778	137926794	.	-	.	ID=RLOC_00011658;geneIDs=comp151775_c0_seq1.path1;transcripts=comp151775_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137925778	137926794	.	-	.	ID=comp151775_c0_seq1.mrna1;geneID=comp151775_c0_seq1.path1;Name=comp151775_c0_seq1;Dir=indeterminatecoverage=99.6;identity=96.0;matches=979;mismatches=37;indels=4;unknowns=0;Target=comp151775_c0_seq1 1023 5 .;CDS_Target=comp151775_c0_seq1 66 7 .;locus=RLOC_00011658
Chr1	stalkie_big_nohaplotig	exon	137925778	137926794	95	-	.	Parent=comp151775_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137926733	137926792	.	-	0	Parent=comp151775_c0_seq1.mrna1
Chr1	gffcl	locus	137956387	137960648	.	-	.	ID=RLOC_00011659;geneIDs=comp71712_c0_seq1.path1;transcripts=comp71712_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137956387	137960648	.	-	.	ID=comp71712_c0_seq1.mrna1;geneID=comp71712_c0_seq1.path1;Name=comp71712_c0_seq1;Dir=antisensecoverage=100.0;identity=97.8;matches=269;mismatches=4;indels=2;unknowns=0;locus=RLOC_00011659
Chr1	stalkie_big_nohaplotig	exon	137956387	137956618	97	-	.	Parent=comp71712_c0_seq1.mrna1;Target=comp71712_c0_seq1 1 230 -
Chr1	stalkie_big_nohaplotig	exon	137960606	137960648	100	-	.	Parent=comp71712_c0_seq1.mrna1;Target=comp71712_c0_seq1 231 273 -
Chr1	stalkie_big_nohaplotig	CDS	137956501	137956618	.	-	1	Parent=comp71712_c0_seq1.mrna1;Target=comp71712_c0_seq1 113 230 .
Chr1	stalkie_big_nohaplotig	CDS	137960606	137960646	.	-	0	Parent=comp71712_c0_seq1.mrna1;Target=comp71712_c0_seq1 231 271 .
Chr1	gffcl	locus	137961395	137961911	.	-	.	ID=RLOC_00011660;geneIDs=comp153893_c0_seq1.path1;transcripts=comp153893_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137961395	137961911	.	-	.	ID=comp153893_c0_seq1.mrna1;geneID=comp153893_c0_seq1.path1;Name=comp153893_c0_seq1;Dir=indeterminatecoverage=98.4;identity=94.6;matches=489;mismatches=16;indels=12;unknowns=0;Target=comp153893_c0_seq1 508 4 .;CDS_Target=comp153893_c0_seq1 508 5 .;locus=RLOC_00011660
Chr1	stalkie_big_nohaplotig	exon	137961395	137961911	94	-	.	Parent=comp153893_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137961395	137961910	.	-	0	Parent=comp153893_c0_seq1.mrna1
Chr1	gffcl	locus	137968434	137975007	.	+	.	ID=RLOC_00011661;geneIDs=FBgn0261675.1.path1;transcripts=FBgn0261675.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137968434	137975007	.	+	.	ID=FBgn0261675.1.mrna1;geneID=FBgn0261675.1.path1;Name=FBgn0261675.1;Dir=sensecoverage=99.7;identity=99.6;matches=3714;mismatches=14;indels=0;unknowns=0;locus=RLOC_00011661
Chr1	stalkie_big_nohaplotig	exon	137968434	137968664	99	+	.	Parent=FBgn0261675.1.mrna1;Target=FBgn0261675.1 11 241 +
Chr1	stalkie_big_nohaplotig	exon	137969996	137970948	99	+	.	Parent=FBgn0261675.1.mrna1;Target=FBgn0261675.1 242 1194 +
Chr1	stalkie_big_nohaplotig	exon	137971040	137971341	100	+	.	Parent=FBgn0261675.1.mrna1;Target=FBgn0261675.1 1195 1496 +
Chr1	stalkie_big_nohaplotig	exon	137972222	137972289	100	+	.	Parent=FBgn0261675.1.mrna1;Target=FBgn0261675.1 1497 1564 +
Chr1	stalkie_big_nohaplotig	exon	137972352	137972966	99	+	.	Parent=FBgn0261675.1.mrna1;Target=FBgn0261675.1 1565 2179 +
Chr1	stalkie_big_nohaplotig	exon	137973036	137973282	99	+	.	Parent=FBgn0261675.1.mrna1;Target=FBgn0261675.1 2180 2426 +
Chr1	stalkie_big_nohaplotig	exon	137973352	137973651	100	+	.	Parent=FBgn0261675.1.mrna1;Target=FBgn0261675.1 2427 2726 +
Chr1	stalkie_big_nohaplotig	exon	137973708	137973817	99	+	.	Parent=FBgn0261675.1.mrna1;Target=FBgn0261675.1 2727 2836 +
Chr1	stalkie_big_nohaplotig	exon	137974038	137974192	99	+	.	Parent=FBgn0261675.1.mrna1;Target=FBgn0261675.1 2837 2991 +
Chr1	stalkie_big_nohaplotig	exon	137974261	137975007	99	+	.	Parent=FBgn0261675.1.mrna1;Target=FBgn0261675.1 2992 3738 +
Chr1	stalkie_big_nohaplotig	CDS	137968436	137968664	.	+	0	Parent=FBgn0261675.1.mrna1;Target=FBgn0261675.1 13 241 +
Chr1	stalkie_big_nohaplotig	CDS	137969996	137970948	.	+	2	Parent=FBgn0261675.1.mrna1;Target=FBgn0261675.1 242 1194 +
Chr1	stalkie_big_nohaplotig	CDS	137971040	137971341	.	+	0	Parent=FBgn0261675.1.mrna1;Target=FBgn0261675.1 1195 1496 +
Chr1	stalkie_big_nohaplotig	CDS	137972222	137972289	.	+	1	Parent=FBgn0261675.1.mrna1;Target=FBgn0261675.1 1497 1564 +
Chr1	stalkie_big_nohaplotig	CDS	137972352	137972966	.	+	2	Parent=FBgn0261675.1.mrna1;Target=FBgn0261675.1 1565 2179 +
Chr1	stalkie_big_nohaplotig	CDS	137973036	137973282	.	+	2	Parent=FBgn0261675.1.mrna1;Target=FBgn0261675.1 2180 2426 +
Chr1	stalkie_big_nohaplotig	CDS	137973352	137973651	.	+	1	Parent=FBgn0261675.1.mrna1;Target=FBgn0261675.1 2427 2726 +
Chr1	stalkie_big_nohaplotig	CDS	137973708	137973817	.	+	1	Parent=FBgn0261675.1.mrna1;Target=FBgn0261675.1 2727 2836 +
Chr1	stalkie_big_nohaplotig	CDS	137974038	137974192	.	+	2	Parent=FBgn0261675.1.mrna1;Target=FBgn0261675.1 2837 2991 +
Chr1	stalkie_big_nohaplotig	CDS	137974261	137975007	.	+	0	Parent=FBgn0261675.1.mrna1;Target=FBgn0261675.1 2992 3738 +
Chr1	gffcl	locus	137981673	137982049	.	-	.	ID=RLOC_00011662;geneIDs=comp142391_c0_seq1.path1;transcripts=comp142391_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137981673	137982049	.	-	.	ID=comp142391_c0_seq1.mrna1;geneID=comp142391_c0_seq1.path1;Name=comp142391_c0_seq1;Dir=indeterminatecoverage=94.2;identity=99.7;matches=376;mismatches=1;indels=0;unknowns=0;Target=comp142391_c0_seq1 377 1 .;CDS_Target=comp142391_c0_seq1 299 234 .;locus=RLOC_00011662
Chr1	stalkie_big_nohaplotig	exon	137981673	137982049	99	-	.	Parent=comp142391_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	137981751	137981816	.	-	0	Parent=comp142391_c0_seq1.mrna1
Chr1	gffcl	locus	137985773	137988782	.	-	.	ID=RLOC_00011663;geneIDs=FBgn0023511.1.path1;transcripts=FBgn0023511.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	137985773	137988782	.	-	.	ID=FBgn0023511.1.mrna1;geneID=FBgn0023511.1.path1;Name=FBgn0023511.1;Dir=sensecoverage=100.0;identity=100.0;matches=2897;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011663
Chr1	stalkie_big_nohaplotig	exon	137985773	137987407	99	-	.	Parent=FBgn0023511.1.mrna1;Target=FBgn0023511.1 1264 2898 +
Chr1	stalkie_big_nohaplotig	exon	137987463	137988591	100	-	.	Parent=FBgn0023511.1.mrna1;Target=FBgn0023511.1 135 1263 +
Chr1	stalkie_big_nohaplotig	exon	137988649	137988782	100	-	.	Parent=FBgn0023511.1.mrna1;Target=FBgn0023511.1 1 134 +
Chr1	stalkie_big_nohaplotig	CDS	137985773	137987407	.	-	0	Parent=FBgn0023511.1.mrna1;Target=FBgn0023511.1 1264 2898 +
Chr1	stalkie_big_nohaplotig	CDS	137987463	137988591	.	-	1	Parent=FBgn0023511.1.mrna1;Target=FBgn0023511.1 135 1263 +
Chr1	stalkie_big_nohaplotig	CDS	137988649	137988782	.	-	0	Parent=FBgn0023511.1.mrna1;Target=FBgn0023511.1 1 134 +
Chr1	gffcl	locus	138004983	138006406	.	+	.	ID=RLOC_00011665;geneIDs=FBgn0023509.path1;transcripts=FBgn0023509.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138004983	138006406	.	+	.	ID=FBgn0023509.mrna1;geneID=FBgn0023509.path1;Name=FBgn0023509;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1407;mismatches=17;indels=1;unknowns=0;Target=FBgn0023509 1425 1 .;CDS_Target=FBgn0023509 101 3 .;locus=RLOC_00011665
Chr1	stalkie_big_nohaplotig	exon	138004983	138006406	98	+	.	Parent=FBgn0023509.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138004985	138005082	.	+	0	Parent=FBgn0023509.mrna1
Chr1	gffcl	locus	138026260	138027073	.	+	.	ID=RLOC_00011666;geneIDs=FBgn0038346.1.path1;transcripts=FBgn0038346.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138026260	138027073	.	+	.	ID=FBgn0038346.1.mrna1;geneID=FBgn0038346.1.path1;Name=FBgn0038346.1;Dir=sensecoverage=100.0;identity=99.1;matches=681;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011666
Chr1	stalkie_big_nohaplotig	exon	138026260	138026421	98	+	.	Parent=FBgn0038346.1.mrna1;Target=FBgn0038346.1 1 162 +
Chr1	stalkie_big_nohaplotig	exon	138026486	138026925	100	+	.	Parent=FBgn0038346.1.mrna1;Target=FBgn0038346.1 163 602 +
Chr1	stalkie_big_nohaplotig	exon	138026989	138027073	95	+	.	Parent=FBgn0038346.1.mrna1;Target=FBgn0038346.1 603 687 +
Chr1	stalkie_big_nohaplotig	CDS	138026260	138026421	.	+	0	Parent=FBgn0038346.1.mrna1;Target=FBgn0038346.1 1 162 +
Chr1	stalkie_big_nohaplotig	CDS	138026486	138026925	.	+	0	Parent=FBgn0038346.1.mrna1;Target=FBgn0038346.1 163 602 +
Chr1	stalkie_big_nohaplotig	CDS	138026989	138027073	.	+	1	Parent=FBgn0038346.1.mrna1;Target=FBgn0038346.1 603 687 +
Chr1	gffcl	locus	138042718	138052823	.	+	.	ID=RLOC_00011667;geneIDs=FBgn0029835.1.path1;transcripts=FBgn0029835.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138042718	138052823	.	+	.	ID=FBgn0029835.1.mrna1;geneID=FBgn0029835.1.path1;Name=FBgn0029835.1;Dir=sensecoverage=100.0;identity=99.3;matches=1835;mismatches=13;indels=0;unknowns=0;locus=RLOC_00011667
Chr1	stalkie_big_nohaplotig	exon	138042718	138042999	99	+	.	Parent=FBgn0029835.1.mrna1;Target=FBgn0029835.1 1 282 +
Chr1	stalkie_big_nohaplotig	exon	138043322	138043455	99	+	.	Parent=FBgn0029835.1.mrna1;Target=FBgn0029835.1 283 416 +
Chr1	stalkie_big_nohaplotig	exon	138051275	138052334	98	+	.	Parent=FBgn0029835.1.mrna1;Target=FBgn0029835.1 417 1476 +
Chr1	stalkie_big_nohaplotig	exon	138052452	138052823	100	+	.	Parent=FBgn0029835.1.mrna1;Target=FBgn0029835.1 1477 1848 +
Chr1	stalkie_big_nohaplotig	CDS	138042718	138042999	.	+	0	Parent=FBgn0029835.1.mrna1;Target=FBgn0029835.1 1 282 +
Chr1	stalkie_big_nohaplotig	CDS	138043322	138043455	.	+	0	Parent=FBgn0029835.1.mrna1;Target=FBgn0029835.1 283 416 +
Chr1	stalkie_big_nohaplotig	CDS	138051275	138052334	.	+	1	Parent=FBgn0029835.1.mrna1;Target=FBgn0029835.1 417 1476 +
Chr1	stalkie_big_nohaplotig	CDS	138052452	138052823	.	+	0	Parent=FBgn0029835.1.mrna1;Target=FBgn0029835.1 1477 1848 +
Chr1	gffcl	locus	138045800	138049817	.	-	.	ID=RLOC_00011668;geneIDs=FBgn0031010.1.path1;transcripts=FBgn0031010.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138045800	138049817	.	-	.	ID=FBgn0031010.1.mrna1;geneID=FBgn0031010.1.path1;Name=FBgn0031010.1;Dir=sensecoverage=100.0;identity=99.6;matches=1677;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011668
Chr1	stalkie_big_nohaplotig	exon	138045800	138046004	100	-	.	Parent=FBgn0031010.1.mrna1;Target=FBgn0031010.1 1479 1683 +
Chr1	stalkie_big_nohaplotig	exon	138046083	138046203	100	-	.	Parent=FBgn0031010.1.mrna1;Target=FBgn0031010.1 1358 1478 +
Chr1	stalkie_big_nohaplotig	exon	138048337	138048481	100	-	.	Parent=FBgn0031010.1.mrna1;Target=FBgn0031010.1 1213 1357 +
Chr1	stalkie_big_nohaplotig	exon	138048537	138049634	99	-	.	Parent=FBgn0031010.1.mrna1;Target=FBgn0031010.1 115 1212 +
Chr1	stalkie_big_nohaplotig	exon	138049704	138049817	100	-	.	Parent=FBgn0031010.1.mrna1;Target=FBgn0031010.1 1 114 +
Chr1	stalkie_big_nohaplotig	CDS	138045800	138046004	.	-	1	Parent=FBgn0031010.1.mrna1;Target=FBgn0031010.1 1479 1683 +
Chr1	stalkie_big_nohaplotig	CDS	138046083	138046203	.	-	2	Parent=FBgn0031010.1.mrna1;Target=FBgn0031010.1 1358 1478 +
Chr1	stalkie_big_nohaplotig	CDS	138048337	138048481	.	-	0	Parent=FBgn0031010.1.mrna1;Target=FBgn0031010.1 1213 1357 +
Chr1	stalkie_big_nohaplotig	CDS	138048537	138049634	.	-	0	Parent=FBgn0031010.1.mrna1;Target=FBgn0031010.1 115 1212 +
Chr1	stalkie_big_nohaplotig	CDS	138049704	138049817	.	-	0	Parent=FBgn0031010.1.mrna1;Target=FBgn0031010.1 1 114 +
Chr1	gffcl	locus	138057492	138067041	.	+	.	ID=RLOC_00011669;geneIDs=comp163525_c0_seq1.path1;transcripts=comp163525_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138057492	138067041	.	+	.	ID=comp163525_c0_seq1.mrna1;geneID=comp163525_c0_seq1.path1;Name=comp163525_c0_seq1;Dir=antisensecoverage=67.8;identity=99.7;matches=2752;mismatches=9;indels=0;unknowns=0;locus=RLOC_00011669
Chr1	stalkie_big_nohaplotig	exon	138057492	138058206	100	+	.	Parent=comp163525_c0_seq1.mrna1;Target=comp163525_c0_seq1 2047 2761 -
Chr1	stalkie_big_nohaplotig	exon	138058341	138058502	99	+	.	Parent=comp163525_c0_seq1.mrna1;Target=comp163525_c0_seq1 1885 2046 -
Chr1	stalkie_big_nohaplotig	exon	138065158	138067041	99	+	.	Parent=comp163525_c0_seq1.mrna1;Target=comp163525_c0_seq1 1 1884 -
Chr1	stalkie_big_nohaplotig	CDS	138058138	138058206	.	+	0	Parent=comp163525_c0_seq1.mrna1;Target=comp163525_c0_seq1 2047 2115 .
Chr1	stalkie_big_nohaplotig	CDS	138058341	138058502	.	+	0	Parent=comp163525_c0_seq1.mrna1;Target=comp163525_c0_seq1 1885 2046 .
Chr1	stalkie_big_nohaplotig	CDS	138065158	138065889	.	+	0	Parent=comp163525_c0_seq1.mrna1;Target=comp163525_c0_seq1 1153 1884 .
Chr1	gffcl	locus	138066288	138066990	.	-	.	ID=RLOC_00011670;geneIDs=FBgn0034869.1.path1;transcripts=FBgn0034869.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138066288	138066990	.	-	.	ID=FBgn0034869.1.mrna1;geneID=FBgn0034869.1.path1;Name=FBgn0034869.1;Dir=sensecoverage=100.0;identity=99.7;matches=580;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011670
Chr1	stalkie_big_nohaplotig	exon	138066288	138066479	100	-	.	Parent=FBgn0034869.1.mrna1;Target=FBgn0034869.1 391 582 +
Chr1	stalkie_big_nohaplotig	exon	138066544	138066785	99	-	.	Parent=FBgn0034869.1.mrna1;Target=FBgn0034869.1 149 390 +
Chr1	stalkie_big_nohaplotig	exon	138066843	138066990	100	-	.	Parent=FBgn0034869.1.mrna1;Target=FBgn0034869.1 1 148 +
Chr1	stalkie_big_nohaplotig	CDS	138066288	138066479	.	-	0	Parent=FBgn0034869.1.mrna1;Target=FBgn0034869.1 391 582 +
Chr1	stalkie_big_nohaplotig	CDS	138066544	138066785	.	-	2	Parent=FBgn0034869.1.mrna1;Target=FBgn0034869.1 149 390 +
Chr1	stalkie_big_nohaplotig	CDS	138066843	138066990	.	-	0	Parent=FBgn0034869.1.mrna1;Target=FBgn0034869.1 1 148 +
Chr1	gffcl	locus	138072966	138074960	.	+	.	ID=RLOC_00011671;geneIDs=FBgn0029836.1.path1;transcripts=FBgn0029836.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138072966	138074960	.	+	.	ID=FBgn0029836.1.mrna1;geneID=FBgn0029836.1.path1;Name=FBgn0029836.1;Dir=sensecoverage=100.0;identity=98.8;matches=563;mismatches=7;indels=0;unknowns=0;locus=RLOC_00011671
Chr1	stalkie_big_nohaplotig	exon	138072966	138073196	97	+	.	Parent=FBgn0029836.1.mrna1;Target=FBgn0029836.1 1 231 +
Chr1	stalkie_big_nohaplotig	exon	138073258	138073380	99	+	.	Parent=FBgn0029836.1.mrna1;Target=FBgn0029836.1 232 354 +
Chr1	stalkie_big_nohaplotig	exon	138073470	138073601	100	+	.	Parent=FBgn0029836.1.mrna1;Target=FBgn0029836.1 355 486 +
Chr1	stalkie_big_nohaplotig	exon	138074877	138074960	100	+	.	Parent=FBgn0029836.1.mrna1;Target=FBgn0029836.1 487 570 +
Chr1	stalkie_big_nohaplotig	CDS	138072966	138073196	.	+	0	Parent=FBgn0029836.1.mrna1;Target=FBgn0029836.1 1 231 +
Chr1	stalkie_big_nohaplotig	CDS	138073258	138073380	.	+	0	Parent=FBgn0029836.1.mrna1;Target=FBgn0029836.1 232 354 +
Chr1	stalkie_big_nohaplotig	CDS	138073470	138073601	.	+	0	Parent=FBgn0029836.1.mrna1;Target=FBgn0029836.1 355 486 +
Chr1	stalkie_big_nohaplotig	CDS	138074877	138074960	.	+	0	Parent=FBgn0029836.1.mrna1;Target=FBgn0029836.1 487 570 +
Chr1	gffcl	locus	138075818	138079462	.	-	.	ID=RLOC_00011672;geneIDs=FBgn0029837.1.path1;transcripts=FBgn0029837.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138075818	138079462	.	-	.	ID=FBgn0029837.1.mrna1;geneID=FBgn0029837.1.path1;Name=FBgn0029837.1;Dir=sensecoverage=100.0;identity=99.9;matches=860;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011672
Chr1	stalkie_big_nohaplotig	exon	138075818	138076055	100	-	.	Parent=FBgn0029837.1.mrna1;Target=FBgn0029837.1 624 861 +
Chr1	stalkie_big_nohaplotig	exon	138076141	138076301	100	-	.	Parent=FBgn0029837.1.mrna1;Target=FBgn0029837.1 463 623 +
Chr1	stalkie_big_nohaplotig	exon	138076391	138076585	100	-	.	Parent=FBgn0029837.1.mrna1;Target=FBgn0029837.1 268 462 +
Chr1	stalkie_big_nohaplotig	exon	138076657	138076848	99	-	.	Parent=FBgn0029837.1.mrna1;Target=FBgn0029837.1 76 267 +
Chr1	stalkie_big_nohaplotig	exon	138079388	138079462	100	-	.	Parent=FBgn0029837.1.mrna1;Target=FBgn0029837.1 1 75 +
Chr1	stalkie_big_nohaplotig	CDS	138075818	138076055	.	-	1	Parent=FBgn0029837.1.mrna1;Target=FBgn0029837.1 624 861 +
Chr1	stalkie_big_nohaplotig	CDS	138076141	138076301	.	-	0	Parent=FBgn0029837.1.mrna1;Target=FBgn0029837.1 463 623 +
Chr1	stalkie_big_nohaplotig	CDS	138076391	138076585	.	-	0	Parent=FBgn0029837.1.mrna1;Target=FBgn0029837.1 268 462 +
Chr1	stalkie_big_nohaplotig	CDS	138076657	138076848	.	-	0	Parent=FBgn0029837.1.mrna1;Target=FBgn0029837.1 76 267 +
Chr1	stalkie_big_nohaplotig	CDS	138079388	138079462	.	-	0	Parent=FBgn0029837.1.mrna1;Target=FBgn0029837.1 1 75 +
Chr1	gffcl	locus	138103942	138104520	.	-	.	ID=RLOC_00011673;geneIDs=FBgn0029838.1.path1;transcripts=FBgn0029838.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138103942	138104520	.	-	.	ID=FBgn0029838.1.mrna1;geneID=FBgn0029838.1.path1;Name=FBgn0029838.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=577;mismatches=2;indels=0;unknowns=0;Target=FBgn0029838.1 579 1 .;locus=RLOC_00011673
Chr1	stalkie_big_nohaplotig	exon	138103942	138104520	99	-	.	Parent=FBgn0029838.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138103942	138104520	.	-	0	Parent=FBgn0029838.1.mrna1
Chr1	gffcl	locus	138114964	138122311	.	-	.	ID=RLOC_00011675;geneIDs=FBgn0026060.1.path1;transcripts=FBgn0026060.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138114964	138122311	.	-	.	ID=FBgn0026060.1.mrna1;geneID=FBgn0026060.1.path1;Name=FBgn0026060.1;Dir=sensecoverage=100.0;identity=99.6;matches=1407;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011675
Chr1	stalkie_big_nohaplotig	exon	138114964	138115132	100	-	.	Parent=FBgn0026060.1.mrna1;Target=FBgn0026060.1 1245 1413 +
Chr1	stalkie_big_nohaplotig	exon	138115470	138115658	100	-	.	Parent=FBgn0026060.1.mrna1;Target=FBgn0026060.1 1056 1244 +
Chr1	stalkie_big_nohaplotig	exon	138115713	138116074	100	-	.	Parent=FBgn0026060.1.mrna1;Target=FBgn0026060.1 694 1055 +
Chr1	stalkie_big_nohaplotig	exon	138121513	138121940	98	-	.	Parent=FBgn0026060.1.mrna1;Target=FBgn0026060.1 266 693 +
Chr1	stalkie_big_nohaplotig	exon	138122047	138122311	100	-	.	Parent=FBgn0026060.1.mrna1;Target=FBgn0026060.1 1 265 +
Chr1	stalkie_big_nohaplotig	CDS	138114964	138115132	.	-	1	Parent=FBgn0026060.1.mrna1;Target=FBgn0026060.1 1245 1413 +
Chr1	stalkie_big_nohaplotig	CDS	138115470	138115658	.	-	1	Parent=FBgn0026060.1.mrna1;Target=FBgn0026060.1 1056 1244 +
Chr1	stalkie_big_nohaplotig	CDS	138115713	138116074	.	-	0	Parent=FBgn0026060.1.mrna1;Target=FBgn0026060.1 694 1055 +
Chr1	stalkie_big_nohaplotig	CDS	138121513	138121940	.	-	2	Parent=FBgn0026060.1.mrna1;Target=FBgn0026060.1 266 693 +
Chr1	stalkie_big_nohaplotig	CDS	138122047	138122311	.	-	0	Parent=FBgn0026060.1.mrna1;Target=FBgn0026060.1 1 265 +
Chr1	gffcl	locus	138116215	138120606	.	-	.	ID=RLOC_00011676;geneIDs=FBgn0029840.1.path1;transcripts=FBgn0029840.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138116215	138120606	.	-	.	ID=FBgn0029840.1.mrna1;geneID=FBgn0029840.1.path1;Name=FBgn0029840.1;Dir=sensecoverage=99.9;identity=99.7;matches=4306;mismatches=15;indels=0;unknowns=0;locus=RLOC_00011676
Chr1	stalkie_big_nohaplotig	exon	138116215	138118560	99	-	.	Parent=FBgn0029840.1.mrna1;Target=FBgn0029840.1 1976 4321 +
Chr1	stalkie_big_nohaplotig	exon	138118632	138120606	99	-	.	Parent=FBgn0029840.1.mrna1;Target=FBgn0029840.1 1 1975 +
Chr1	stalkie_big_nohaplotig	CDS	138116216	138118560	.	-	2	Parent=FBgn0029840.1.mrna1;Target=FBgn0029840.1 1976 4320 +
Chr1	stalkie_big_nohaplotig	CDS	138118632	138120606	.	-	0	Parent=FBgn0029840.1.mrna1;Target=FBgn0029840.1 1 1975 +
Chr1	gffcl	locus	138136839	138156611	.	+	.	ID=RLOC_00011677;geneIDs=FBgn0029843.1.path1;transcripts=FBgn0029843.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138136839	138156611	.	+	.	ID=FBgn0029843.1.mrna1;geneID=FBgn0029843.1.path1;Name=FBgn0029843.1;Dir=sensecoverage=100.0;identity=99.7;matches=2793;mismatches=9;indels=0;unknowns=0;locus=RLOC_00011677
Chr1	stalkie_big_nohaplotig	exon	138136839	138137586	99	+	.	Parent=FBgn0029843.1.mrna1;Target=FBgn0029843.1 1 748 +
Chr1	stalkie_big_nohaplotig	exon	138150334	138150387	100	+	.	Parent=FBgn0029843.1.mrna1;Target=FBgn0029843.1 749 802 +
Chr1	stalkie_big_nohaplotig	exon	138153650	138153777	100	+	.	Parent=FBgn0029843.1.mrna1;Target=FBgn0029843.1 803 930 +
Chr1	stalkie_big_nohaplotig	exon	138153835	138153952	100	+	.	Parent=FBgn0029843.1.mrna1;Target=FBgn0029843.1 931 1048 +
Chr1	stalkie_big_nohaplotig	exon	138154601	138155604	99	+	.	Parent=FBgn0029843.1.mrna1;Target=FBgn0029843.1 1049 2052 +
Chr1	stalkie_big_nohaplotig	exon	138155670	138155832	100	+	.	Parent=FBgn0029843.1.mrna1;Target=FBgn0029843.1 2053 2215 +
Chr1	stalkie_big_nohaplotig	exon	138155911	138156030	100	+	.	Parent=FBgn0029843.1.mrna1;Target=FBgn0029843.1 2216 2335 +
Chr1	stalkie_big_nohaplotig	exon	138156092	138156288	100	+	.	Parent=FBgn0029843.1.mrna1;Target=FBgn0029843.1 2336 2532 +
Chr1	stalkie_big_nohaplotig	exon	138156342	138156611	99	+	.	Parent=FBgn0029843.1.mrna1;Target=FBgn0029843.1 2533 2802 +
Chr1	stalkie_big_nohaplotig	CDS	138136839	138137586	.	+	0	Parent=FBgn0029843.1.mrna1;Target=FBgn0029843.1 1 748 +
Chr1	stalkie_big_nohaplotig	CDS	138150334	138150387	.	+	2	Parent=FBgn0029843.1.mrna1;Target=FBgn0029843.1 749 802 +
Chr1	stalkie_big_nohaplotig	CDS	138153650	138153777	.	+	2	Parent=FBgn0029843.1.mrna1;Target=FBgn0029843.1 803 930 +
Chr1	stalkie_big_nohaplotig	CDS	138153835	138153952	.	+	0	Parent=FBgn0029843.1.mrna1;Target=FBgn0029843.1 931 1048 +
Chr1	stalkie_big_nohaplotig	CDS	138154601	138155604	.	+	2	Parent=FBgn0029843.1.mrna1;Target=FBgn0029843.1 1049 2052 +
Chr1	stalkie_big_nohaplotig	CDS	138155670	138155832	.	+	0	Parent=FBgn0029843.1.mrna1;Target=FBgn0029843.1 2053 2215 +
Chr1	stalkie_big_nohaplotig	CDS	138155911	138156030	.	+	2	Parent=FBgn0029843.1.mrna1;Target=FBgn0029843.1 2216 2335 +
Chr1	stalkie_big_nohaplotig	CDS	138156092	138156288	.	+	2	Parent=FBgn0029843.1.mrna1;Target=FBgn0029843.1 2336 2532 +
Chr1	stalkie_big_nohaplotig	CDS	138156342	138156611	.	+	0	Parent=FBgn0029843.1.mrna1;Target=FBgn0029843.1 2533 2802 +
Chr1	gffcl	locus	138159049	138160769	.	-	.	ID=RLOC_00011678;geneIDs=FBgn0030452.1.path1;transcripts=FBgn0030452.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138159049	138160769	.	-	.	ID=FBgn0030452.1.mrna1;geneID=FBgn0030452.1.path1;Name=FBgn0030452.1;Dir=sensecoverage=100.0;identity=99.6;matches=1647;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011678
Chr1	stalkie_big_nohaplotig	exon	138159049	138160517	99	-	.	Parent=FBgn0030452.1.mrna1;Target=FBgn0030452.1 185 1653 +
Chr1	stalkie_big_nohaplotig	exon	138160586	138160769	100	-	.	Parent=FBgn0030452.1.mrna1;Target=FBgn0030452.1 1 184 +
Chr1	stalkie_big_nohaplotig	CDS	138159049	138160517	.	-	2	Parent=FBgn0030452.1.mrna1;Target=FBgn0030452.1 185 1653 +
Chr1	stalkie_big_nohaplotig	CDS	138160586	138160769	.	-	0	Parent=FBgn0030452.1.mrna1;Target=FBgn0030452.1 1 184 +
Chr1	gffcl	locus	138161253	138162233	.	-	.	ID=RLOC_00011679;geneIDs=FBgn0030451.1.path1;transcripts=FBgn0030451.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138161253	138162233	.	-	.	ID=FBgn0030451.1.mrna1;geneID=FBgn0030451.1.path1;Name=FBgn0030451.1;Dir=sensecoverage=100.0;identity=99.6;matches=899;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011679
Chr1	stalkie_big_nohaplotig	exon	138161253	138161918	99	-	.	Parent=FBgn0030451.1.mrna1;Target=FBgn0030451.1 238 903 +
Chr1	stalkie_big_nohaplotig	exon	138161997	138162233	99	-	.	Parent=FBgn0030451.1.mrna1;Target=FBgn0030451.1 1 237 +
Chr1	stalkie_big_nohaplotig	CDS	138161253	138161918	.	-	0	Parent=FBgn0030451.1.mrna1;Target=FBgn0030451.1 238 903 +
Chr1	stalkie_big_nohaplotig	CDS	138161997	138162233	.	-	0	Parent=FBgn0030451.1.mrna1;Target=FBgn0030451.1 1 237 +
Chr1	gffcl	locus	138164843	138247260	.	+	.	ID=RLOC_00011680;geneIDs=FBgn0052638.1.path1;transcripts=FBgn0052638.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138164843	138247260	.	+	.	ID=FBgn0052638.1.mrna1;geneID=FBgn0052638.1.path1;Name=FBgn0052638.1;Dir=sensecoverage=100.0;identity=100.0;matches=450;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011680
Chr1	stalkie_big_nohaplotig	exon	138164843	138164863	100	+	.	Parent=FBgn0052638.1.mrna1;Target=FBgn0052638.1 1 21 +
Chr1	stalkie_big_nohaplotig	exon	138172444	138172590	100	+	.	Parent=FBgn0052638.1.mrna1;Target=FBgn0052638.1 22 168 +
Chr1	stalkie_big_nohaplotig	exon	138246899	138246968	100	+	.	Parent=FBgn0052638.1.mrna1;Target=FBgn0052638.1 169 238 +
Chr1	stalkie_big_nohaplotig	exon	138247049	138247260	100	+	.	Parent=FBgn0052638.1.mrna1;Target=FBgn0052638.1 239 450 +
Chr1	stalkie_big_nohaplotig	CDS	138164843	138164863	.	+	0	Parent=FBgn0052638.1.mrna1;Target=FBgn0052638.1 1 21 +
Chr1	stalkie_big_nohaplotig	CDS	138172444	138172590	.	+	0	Parent=FBgn0052638.1.mrna1;Target=FBgn0052638.1 22 168 +
Chr1	stalkie_big_nohaplotig	CDS	138246899	138246968	.	+	0	Parent=FBgn0052638.1.mrna1;Target=FBgn0052638.1 169 238 +
Chr1	stalkie_big_nohaplotig	CDS	138247049	138247260	.	+	2	Parent=FBgn0052638.1.mrna1;Target=FBgn0052638.1 239 450 +
Chr1	gffcl	locus	138180712	138338051	.	-	.	ID=RLOC_00011682;geneIDs=FBgn0085446.1.path1,comp135456_c0_seq1.path1,comp147307_c0_seq1.path1,comp150661_c0_seq1.path1,comp158431_c0_seq1.path2,comp163915_c0_seq1.path1;transcripts=comp158431_c0_seq1.mrna2,FBgn0085446.1.mrna1,comp150661_c0_seq1.mrna1,comp163915_c0_seq1.mrna1,comp135456_c0_seq1.mrna1,comp147307_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138180712	138337762	.	-	.	ID=comp158431_c0_seq1.mrna2;geneID=comp158431_c0_seq1.path2;Name=comp158431_c0_seq1;Dir=indeterminatecoverage=69.0;identity=92.7;matches=454;mismatches=17;indels=19;unknowns=0;locus=RLOC_00011682
Chr1	stalkie_big_nohaplotig	exon	138180712	138181048	98	-	.	Parent=comp158431_c0_seq1.mrna2;Target=comp158431_c0_seq1 709 373 .
Chr1	stalkie_big_nohaplotig	exon	138196315	138196324	100	-	.	Parent=comp158431_c0_seq1.mrna2;Target=comp158431_c0_seq1 372 363 .
Chr1	stalkie_big_nohaplotig	exon	138200549	138200558	90	-	.	Parent=comp158431_c0_seq1.mrna2;Target=comp158431_c0_seq1 362 353 .
Chr1	stalkie_big_nohaplotig	exon	138215161	138215165	100	-	.	Parent=comp158431_c0_seq1.mrna2;Target=comp158431_c0_seq1 352 348 .
Chr1	stalkie_big_nohaplotig	exon	138218442	138218447	83	-	.	Parent=comp158431_c0_seq1.mrna2;Target=comp158431_c0_seq1 347 342 .
Chr1	stalkie_big_nohaplotig	exon	138226617	138226624	100	-	.	Parent=comp158431_c0_seq1.mrna2;Target=comp158431_c0_seq1 341 334 .
Chr1	stalkie_big_nohaplotig	exon	138241864	138241868	100	-	.	Parent=comp158431_c0_seq1.mrna2;Target=comp158431_c0_seq1 333 329 .
Chr1	stalkie_big_nohaplotig	exon	138245856	138245860	100	-	.	Parent=comp158431_c0_seq1.mrna2;Target=comp158431_c0_seq1 328 324 .
Chr1	stalkie_big_nohaplotig	exon	138259562	138259569	87	-	.	Parent=comp158431_c0_seq1.mrna2;Target=comp158431_c0_seq1 323 316 .
Chr1	stalkie_big_nohaplotig	exon	138267371	138267374	75	-	.	Parent=comp158431_c0_seq1.mrna2;Target=comp158431_c0_seq1 315 312 .
Chr1	stalkie_big_nohaplotig	exon	138271785	138271792	100	-	.	Parent=comp158431_c0_seq1.mrna2;Target=comp158431_c0_seq1 311 304 .
Chr1	stalkie_big_nohaplotig	exon	138293397	138293405	100	-	.	Parent=comp158431_c0_seq1.mrna2;Target=comp158431_c0_seq1 303 295 .
Chr1	stalkie_big_nohaplotig	exon	138299785	138299820	50	-	.	Parent=comp158431_c0_seq1.mrna2;Target=comp158431_c0_seq1 294 242 .
Chr1	stalkie_big_nohaplotig	exon	138331799	138331801	100	-	.	Parent=comp158431_c0_seq1.mrna2;Target=comp158431_c0_seq1 241 239 .
Chr1	stalkie_big_nohaplotig	exon	138335197	138335199	100	-	.	Parent=comp158431_c0_seq1.mrna2;Target=comp158431_c0_seq1 238 236 .
Chr1	stalkie_big_nohaplotig	exon	138335259	138335267	100	-	.	Parent=comp158431_c0_seq1.mrna2;Target=comp158431_c0_seq1 235 227 .
Chr1	stalkie_big_nohaplotig	exon	138337757	138337762	100	-	.	Parent=comp158431_c0_seq1.mrna2;Target=comp158431_c0_seq1 226 221 .
Chr1	stalkie_big_nohaplotig	mRNA	138297835	138338051	.	-	.	ID=FBgn0085446.1.mrna1;geneID=FBgn0085446.1.path1;Name=FBgn0085446.1;Dir=sensecoverage=100.0;identity=99.3;matches=10594;mismatches=71;indels=9;unknowns=0;locus=RLOC_00011682
Chr1	stalkie_big_nohaplotig	exon	138297835	138297955	100	-	.	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 10548 10668 +
Chr1	stalkie_big_nohaplotig	exon	138298957	138299108	99	-	.	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 10396 10547 +
Chr1	stalkie_big_nohaplotig	exon	138300437	138300590	100	-	.	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 10242 10395 +
Chr1	stalkie_big_nohaplotig	exon	138306005	138306101	100	-	.	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 10145 10241 +
Chr1	stalkie_big_nohaplotig	exon	138306404	138306487	100	-	.	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 10061 10144 +
Chr1	stalkie_big_nohaplotig	exon	138316224	138316299	100	-	.	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 9985 10060 +
Chr1	stalkie_big_nohaplotig	exon	138316380	138316493	100	-	.	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 9871 9984 +
Chr1	stalkie_big_nohaplotig	exon	138327550	138327731	96	-	.	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 9695 9870 +
Chr1	stalkie_big_nohaplotig	exon	138327790	138328071	98	-	.	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 9413 9694 +
Chr1	stalkie_big_nohaplotig	exon	138328157	138328376	99	-	.	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 9193 9412 +
Chr1	stalkie_big_nohaplotig	exon	138328453	138328643	99	-	.	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 9002 9192 +
Chr1	stalkie_big_nohaplotig	exon	138328703	138334999	99	-	.	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 2705 9001 +
Chr1	stalkie_big_nohaplotig	exon	138335181	138335459	100	-	.	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 2426 2704 +
Chr1	stalkie_big_nohaplotig	exon	138335578	138335763	100	-	.	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 2240 2425 +
Chr1	stalkie_big_nohaplotig	exon	138335816	138338051	99	-	.	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 1 2239 +
Chr1	stalkie_big_nohaplotig	CDS	138297835	138297955	.	-	1	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 10548 10668 +
Chr1	stalkie_big_nohaplotig	CDS	138298957	138299108	.	-	0	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 10396 10547 +
Chr1	stalkie_big_nohaplotig	CDS	138300437	138300590	.	-	1	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 10242 10395 +
Chr1	stalkie_big_nohaplotig	CDS	138306005	138306101	.	-	2	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 10145 10241 +
Chr1	stalkie_big_nohaplotig	CDS	138306404	138306487	.	-	2	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 10061 10144 +
Chr1	stalkie_big_nohaplotig	CDS	138316224	138316299	.	-	0	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 9985 10060 +
Chr1	stalkie_big_nohaplotig	CDS	138316380	138316493	.	-	0	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 9871 9984 +
Chr1	stalkie_big_nohaplotig	CDS	138327550	138327731	.	-	2	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 9695 9870 +
Chr1	stalkie_big_nohaplotig	CDS	138327790	138328071	.	-	2	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 9413 9694 +
Chr1	stalkie_big_nohaplotig	CDS	138328157	138328376	.	-	0	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 9193 9412 +
Chr1	stalkie_big_nohaplotig	CDS	138328453	138328643	.	-	2	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 9002 9192 +
Chr1	stalkie_big_nohaplotig	CDS	138328703	138334999	.	-	2	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 2705 9001 +
Chr1	stalkie_big_nohaplotig	CDS	138335181	138335459	.	-	2	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 2426 2704 +
Chr1	stalkie_big_nohaplotig	CDS	138335578	138335763	.	-	2	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 2240 2425 +
Chr1	stalkie_big_nohaplotig	CDS	138335816	138338051	.	-	0	Parent=FBgn0085446.1.mrna1;Target=FBgn0085446.1 1 2239 +
Chr1	stalkie_big_nohaplotig	mRNA	138299392	138299789	.	-	.	ID=comp150661_c0_seq1.mrna1;geneID=comp150661_c0_seq1.path1;Name=comp150661_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.2;matches=391;mismatches=7;indels=0;unknowns=0;Target=comp150661_c0_seq1 398 1 .;CDS_Target=comp150661_c0_seq1 259 164 .;locus=RLOC_00011682
Chr1	stalkie_big_nohaplotig	exon	138299392	138299789	98	-	.	Parent=comp150661_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138299531	138299626	.	-	0	Parent=comp150661_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138306465	138316246	.	-	.	ID=comp163915_c0_seq1.mrna1;geneID=comp163915_c0_seq1.path1;Name=comp163915_c0_seq1;Dir=sensecoverage=100.0;identity=99.1;matches=6986;mismatches=57;indels=7;unknowns=0;locus=RLOC_00011682
Chr1	stalkie_big_nohaplotig	exon	138306465	138306487	100	-	.	Parent=comp163915_c0_seq1.mrna1;Target=comp163915_c0_seq1 7028 7050 +
Chr1	stalkie_big_nohaplotig	exon	138308250	138315246	99	-	.	Parent=comp163915_c0_seq1.mrna1;Target=comp163915_c0_seq1 24 7027 +
Chr1	stalkie_big_nohaplotig	exon	138316224	138316246	100	-	.	Parent=comp163915_c0_seq1.mrna1;Target=comp163915_c0_seq1 1 23 +
Chr1	stalkie_big_nohaplotig	CDS	138309044	138315246	.	-	2	Parent=comp163915_c0_seq1.mrna1;Target=comp163915_c0_seq1 24 6232 +
Chr1	stalkie_big_nohaplotig	CDS	138316224	138316245	.	-	0	Parent=comp163915_c0_seq1.mrna1;Target=comp163915_c0_seq1 2 23 +
Chr1	stalkie_big_nohaplotig	mRNA	138306467	138315867	.	-	.	ID=comp135456_c0_seq1.mrna1;geneID=comp135456_c0_seq1.path1;Name=comp135456_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=216;mismatches=1;indels=0;unknowns=0;Target=comp135456_c0_seq1 60 137 +;locus=RLOC_00011682
Chr1	stalkie_big_nohaplotig	exon	138306467	138306487	100	-	.	Parent=comp135456_c0_seq1.mrna1;Target=comp135456_c0_seq1 197 217 +
Chr1	stalkie_big_nohaplotig	exon	138315672	138315867	99	-	.	Parent=comp135456_c0_seq1.mrna1;Target=comp135456_c0_seq1 1 196 +
Chr1	stalkie_big_nohaplotig	CDS	138315731	138315808	.	-	0	Parent=comp135456_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138316471	138324355	.	-	.	ID=comp147307_c0_seq1.mrna1;geneID=comp147307_c0_seq1.path1;Name=comp147307_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=702;mismatches=3;indels=1;unknowns=0;Target=comp147307_c0_seq1 574 705 .;locus=RLOC_00011682
Chr1	stalkie_big_nohaplotig	exon	138316471	138316493	100	-	.	Parent=comp147307_c0_seq1.mrna1;Target=comp147307_c0_seq1 1 23 -
Chr1	stalkie_big_nohaplotig	exon	138323673	138324355	99	-	.	Parent=comp147307_c0_seq1.mrna1;Target=comp147307_c0_seq1 24 705 -
Chr1	stalkie_big_nohaplotig	CDS	138324224	138324355	.	-	0	Parent=comp147307_c0_seq1.mrna1
Chr1	gffcl	locus	138189078	138195855	.	+	.	ID=RLOC_00011683;geneIDs=comp161715_c0_seq1.path1,comp161735_c0_seq1.path1;transcripts=comp161735_c0_seq1.mrna1,comp161715_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138189078	138195855	.	+	.	ID=comp161735_c0_seq1.mrna1;geneID=comp161735_c0_seq1.path1;Name=comp161735_c0_seq1;Dir=antisensecoverage=97.7;identity=94.4;matches=1330;mismatches=59;indels=20;unknowns=100;Target=comp161735_c0_seq1 272 388 .;locus=RLOC_00011683
Chr1	stalkie_big_nohaplotig	exon	138189078	138189756	95	+	.	Parent=comp161735_c0_seq1.mrna1;Target=comp161735_c0_seq1 895 1577 -
Chr1	stalkie_big_nohaplotig	exon	138189971	138190214	93	+	.	Parent=comp161735_c0_seq1.mrna1;Target=comp161735_c0_seq1 639 885 -
Chr1	stalkie_big_nohaplotig	exon	138190533	138190946	97	+	.	Parent=comp161735_c0_seq1.mrna1;Target=comp161735_c0_seq1 228 638 -
Chr1	stalkie_big_nohaplotig	exon	138194035	138194060	57	+	.	Parent=comp161735_c0_seq1.mrna1;Target=comp161735_c0_seq1 203 227 -
Chr1	stalkie_big_nohaplotig	exon	138195723	138195855	66	+	.	Parent=comp161735_c0_seq1.mrna1;Target=comp161735_c0_seq1 38 173 -
Chr1	stalkie_big_nohaplotig	CDS	138190783	138190903	.	+	0	Parent=comp161735_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138193279	138195053	.	+	.	ID=comp161715_c0_seq1.mrna1;geneID=comp161715_c0_seq1.path1;Name=comp161715_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=1745;mismatches=30;indels=1;unknowns=0;Target=comp161715_c0_seq1 1776 1 .;CDS_Target=comp161715_c0_seq1 1155 961 .;locus=RLOC_00011683
Chr1	stalkie_big_nohaplotig	exon	138193279	138195053	98	+	.	Parent=comp161715_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138194238	138194432	.	+	0	Parent=comp161715_c0_seq1.mrna1
Chr1	gffcl	locus	138197246	138198973	.	+	.	ID=RLOC_00011684;geneIDs=comp161715_c0_seq1.path2;transcripts=comp161715_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	138197246	138198973	.	+	.	ID=comp161715_c0_seq1.mrna2;geneID=comp161715_c0_seq1.path2;Name=comp161715_c0_seq1;Dir=indeterminatecoverage=97.4;identity=97.5;matches=1686;mismatches=42;indels=1;unknowns=0;Target=comp161715_c0_seq1 1776 48 .;CDS_Target=comp161715_c0_seq1 1155 961 .;locus=RLOC_00011684
Chr1	stalkie_big_nohaplotig	exon	138197246	138198973	97	+	.	Parent=comp161715_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	138198158	138198352	.	+	0	Parent=comp161715_c0_seq1.mrna2
Chr1	gffcl	locus	138250169	138256002	.	-	.	ID=RLOC_00011686;geneIDs=FBgn0250862.1.path1;transcripts=FBgn0250862.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138250169	138256002	.	-	.	ID=FBgn0250862.1.mrna1;geneID=FBgn0250862.1.path1;Name=FBgn0250862.1;Dir=sensecoverage=99.7;identity=99.1;matches=759;mismatches=6;indels=1;unknowns=0;locus=RLOC_00011686
Chr1	stalkie_big_nohaplotig	exon	138250169	138250186	100	-	.	Parent=FBgn0250862.1.mrna1;Target=FBgn0250862.1 751 768 +
Chr1	stalkie_big_nohaplotig	exon	138250252	138250411	98	-	.	Parent=FBgn0250862.1.mrna1;Target=FBgn0250862.1 590 750 +
Chr1	stalkie_big_nohaplotig	exon	138250469	138250716	98	-	.	Parent=FBgn0250862.1.mrna1;Target=FBgn0250862.1 342 589 +
Chr1	stalkie_big_nohaplotig	exon	138252137	138252253	100	-	.	Parent=FBgn0250862.1.mrna1;Target=FBgn0250862.1 225 341 +
Chr1	stalkie_big_nohaplotig	exon	138255781	138256002	99	-	.	Parent=FBgn0250862.1.mrna1;Target=FBgn0250862.1 3 224 +
Chr1	stalkie_big_nohaplotig	CDS	138250169	138250186	.	-	1	Parent=FBgn0250862.1.mrna1;Target=FBgn0250862.1 751 768 +
Chr1	stalkie_big_nohaplotig	CDS	138250252	138250411	.	-	2	Parent=FBgn0250862.1.mrna1;Target=FBgn0250862.1 590 750 +
Chr1	stalkie_big_nohaplotig	CDS	138250469	138250716	.	-	1	Parent=FBgn0250862.1.mrna1;Target=FBgn0250862.1 342 589 +
Chr1	stalkie_big_nohaplotig	CDS	138252137	138252253	.	-	1	Parent=FBgn0250862.1.mrna1;Target=FBgn0250862.1 225 341 +
Chr1	stalkie_big_nohaplotig	CDS	138255781	138256001	.	-	0	Parent=FBgn0250862.1.mrna1;Target=FBgn0250862.1 4 224 +
Chr1	gffcl	locus	138264380	138266280	.	+	.	ID=RLOC_00011687;geneIDs=comp153289_c0_seq1.path1;transcripts=comp153289_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138264380	138266280	.	+	.	ID=comp153289_c0_seq1.mrna1;geneID=comp153289_c0_seq1.path1;Name=comp153289_c0_seq1;Dir=sensecoverage=99.9;identity=95.5;matches=778;mismatches=27;indels=10;unknowns=0;Target=comp153289_c0_seq1 504 638 +;locus=RLOC_00011687
Chr1	stalkie_big_nohaplotig	exon	138264380	138264852	93	+	.	Parent=comp153289_c0_seq1.mrna1;Target=comp153289_c0_seq1 1 464 +
Chr1	stalkie_big_nohaplotig	exon	138265940	138266280	97	+	.	Parent=comp153289_c0_seq1.mrna1;Target=comp153289_c0_seq1 465 806 +
Chr1	stalkie_big_nohaplotig	CDS	138265979	138266112	.	+	0	Parent=comp153289_c0_seq1.mrna1
Chr1	gffcl	locus	138279504	138280028	.	+	.	ID=RLOC_00011688;geneIDs=comp143387_c0_seq1.path1;transcripts=comp143387_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138279504	138280028	.	+	.	ID=comp143387_c0_seq1.mrna1;geneID=comp143387_c0_seq1.path1;Name=comp143387_c0_seq1;Dir=indeterminatecoverage=97.3;identity=94.5;matches=496;mismatches=17;indels=12;unknowns=0;Target=comp143387_c0_seq1 513 1 .;CDS_Target=comp143387_c0_seq1 511 413 .;locus=RLOC_00011688
Chr1	stalkie_big_nohaplotig	exon	138279504	138280028	94	+	.	Parent=comp143387_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138279928	138280026	.	+	0	Parent=comp143387_c0_seq1.mrna1
Chr1	gffcl	locus	138280673	138294049	.	-	.	ID=RLOC_00011689;geneIDs=FBgn0029878.1.path1;transcripts=FBgn0029878.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138280673	138294049	.	-	.	ID=FBgn0029878.1.mrna1;geneID=FBgn0029878.1.path1;Name=FBgn0029878.1;Dir=sensecoverage=100.0;identity=99.9;matches=1978;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011689
Chr1	stalkie_big_nohaplotig	exon	138280673	138280750	100	-	.	Parent=FBgn0029878.1.mrna1;Target=FBgn0029878.1 1903 1980 +
Chr1	stalkie_big_nohaplotig	exon	138280817	138280974	100	-	.	Parent=FBgn0029878.1.mrna1;Target=FBgn0029878.1 1745 1902 +
Chr1	stalkie_big_nohaplotig	exon	138281029	138281194	100	-	.	Parent=FBgn0029878.1.mrna1;Target=FBgn0029878.1 1579 1744 +
Chr1	stalkie_big_nohaplotig	exon	138281260	138281770	100	-	.	Parent=FBgn0029878.1.mrna1;Target=FBgn0029878.1 1068 1578 +
Chr1	stalkie_big_nohaplotig	exon	138284224	138284325	98	-	.	Parent=FBgn0029878.1.mrna1;Target=FBgn0029878.1 966 1067 +
Chr1	stalkie_big_nohaplotig	exon	138284391	138284618	100	-	.	Parent=FBgn0029878.1.mrna1;Target=FBgn0029878.1 738 965 +
Chr1	stalkie_big_nohaplotig	exon	138284695	138285218	100	-	.	Parent=FBgn0029878.1.mrna1;Target=FBgn0029878.1 214 737 +
Chr1	stalkie_big_nohaplotig	exon	138293837	138294049	100	-	.	Parent=FBgn0029878.1.mrna1;Target=FBgn0029878.1 1 213 +
Chr1	stalkie_big_nohaplotig	CDS	138280673	138280750	.	-	0	Parent=FBgn0029878.1.mrna1;Target=FBgn0029878.1 1903 1980 +
Chr1	stalkie_big_nohaplotig	CDS	138280817	138280974	.	-	2	Parent=FBgn0029878.1.mrna1;Target=FBgn0029878.1 1745 1902 +
Chr1	stalkie_big_nohaplotig	CDS	138281029	138281194	.	-	0	Parent=FBgn0029878.1.mrna1;Target=FBgn0029878.1 1579 1744 +
Chr1	stalkie_big_nohaplotig	CDS	138281260	138281770	.	-	1	Parent=FBgn0029878.1.mrna1;Target=FBgn0029878.1 1068 1578 +
Chr1	stalkie_big_nohaplotig	CDS	138284224	138284325	.	-	1	Parent=FBgn0029878.1.mrna1;Target=FBgn0029878.1 966 1067 +
Chr1	stalkie_big_nohaplotig	CDS	138284391	138284618	.	-	1	Parent=FBgn0029878.1.mrna1;Target=FBgn0029878.1 738 965 +
Chr1	stalkie_big_nohaplotig	CDS	138284695	138285218	.	-	0	Parent=FBgn0029878.1.mrna1;Target=FBgn0029878.1 214 737 +
Chr1	stalkie_big_nohaplotig	CDS	138293837	138294049	.	-	0	Parent=FBgn0029878.1.mrna1;Target=FBgn0029878.1 1 213 +
Chr1	gffcl	locus	138282382	138283155	.	+	.	ID=RLOC_00011690;geneIDs=comp150138_c1_seq1.path1;transcripts=comp150138_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138282382	138283155	.	+	.	ID=comp150138_c1_seq1.mrna1;geneID=comp150138_c1_seq1.path1;Name=comp150138_c1_seq1;Dir=indeterminatecoverage=99.7;identity=93.2;matches=743;mismatches=14;indels=40;unknowns=0;Target=comp150138_c1_seq1 780 1 .;CDS_Target=comp150138_c1_seq1 421 188 .;locus=RLOC_00011690
Chr1	stalkie_big_nohaplotig	exon	138282382	138283155	93	+	.	Parent=comp150138_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138282569	138282779	.	+	0	Parent=comp150138_c1_seq1.mrna1
Chr1	gffcl	locus	138294658	138295498	.	-	.	ID=RLOC_00011691;geneIDs=FBgn0029877.1.path1;transcripts=FBgn0029877.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138294658	138295498	.	-	.	ID=FBgn0029877.1.mrna1;geneID=FBgn0029877.1.path1;Name=FBgn0029877.1;Dir=sensecoverage=100.0;identity=99.6;matches=723;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011691
Chr1	stalkie_big_nohaplotig	exon	138294658	138294797	99	-	.	Parent=FBgn0029877.1.mrna1;Target=FBgn0029877.1 587 726 +
Chr1	stalkie_big_nohaplotig	exon	138294856	138295165	99	-	.	Parent=FBgn0029877.1.mrna1;Target=FBgn0029877.1 277 586 +
Chr1	stalkie_big_nohaplotig	exon	138295223	138295498	99	-	.	Parent=FBgn0029877.1.mrna1;Target=FBgn0029877.1 1 276 +
Chr1	stalkie_big_nohaplotig	CDS	138294658	138294797	.	-	2	Parent=FBgn0029877.1.mrna1;Target=FBgn0029877.1 587 726 +
Chr1	stalkie_big_nohaplotig	CDS	138294856	138295165	.	-	0	Parent=FBgn0029877.1.mrna1;Target=FBgn0029877.1 277 586 +
Chr1	stalkie_big_nohaplotig	CDS	138295223	138295498	.	-	0	Parent=FBgn0029877.1.mrna1;Target=FBgn0029877.1 1 276 +
Chr1	gffcl	locus	138298131	138298716	.	+	.	ID=RLOC_00011692;geneIDs=comp156395_c0_seq1.path1;transcripts=comp156395_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138298131	138298716	.	+	.	ID=comp156395_c0_seq1.mrna1;geneID=comp156395_c0_seq1.path1;Name=comp156395_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=574;mismatches=12;indels=1;unknowns=0;Target=comp156395_c0_seq1 587 1 .;CDS_Target=comp156395_c0_seq1 368 321 .;locus=RLOC_00011692
Chr1	stalkie_big_nohaplotig	exon	138298131	138298716	97	+	.	Parent=comp156395_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138298451	138298497	.	+	0	Parent=comp156395_c0_seq1.mrna1
Chr1	gffcl	locus	138304081	138304320	.	+	.	ID=RLOC_00011693;geneIDs=comp146895_c0_seq1.path1;transcripts=comp146895_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138304081	138304320	.	+	.	ID=comp146895_c0_seq1.mrna1;geneID=comp146895_c0_seq1.path1;Name=comp146895_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=234;mismatches=6;indels=0;unknowns=0;Target=comp146895_c0_seq1 240 1 .;CDS_Target=comp146895_c0_seq1 78 1 .;locus=RLOC_00011693
Chr1	stalkie_big_nohaplotig	exon	138304081	138304320	97	+	.	Parent=comp146895_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138304081	138304158	.	+	0	Parent=comp146895_c0_seq1.mrna1
Chr1	gffcl	locus	138306602	138307595	.	+	.	ID=RLOC_00011694;geneIDs=comp155111_c0_seq1.path1;transcripts=comp155111_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138306602	138307595	.	+	.	ID=comp155111_c0_seq1.mrna1;geneID=comp155111_c0_seq1.path1;Name=comp155111_c0_seq1;Dir=indeterminatecoverage=99.9;identity=95.5;matches=960;mismatches=20;indels=25;unknowns=0;Target=comp155111_c0_seq1 992 2 .;CDS_Target=comp155111_c0_seq1 491 360 .;locus=RLOC_00011694
Chr1	stalkie_big_nohaplotig	exon	138306602	138307595	95	+	.	Parent=comp155111_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138306960	138307091	.	+	0	Parent=comp155111_c0_seq1.mrna1
Chr1	gffcl	locus	138378438	138378802	.	+	.	ID=RLOC_00011695;geneIDs=comp58072_c0_seq1.path1;transcripts=comp58072_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138378438	138378802	.	+	.	ID=comp58072_c0_seq1.mrna1;geneID=comp58072_c0_seq1.path1;Name=comp58072_c0_seq1;Dir=indeterminatecoverage=92.6;identity=99.7;matches=364;mismatches=1;indels=0;unknowns=0;Target=comp58072_c0_seq1 383 19 .;CDS_Target=comp58072_c0_seq1 297 46 .;locus=RLOC_00011695
Chr1	stalkie_big_nohaplotig	exon	138378438	138378802	99	+	.	Parent=comp58072_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138378465	138378716	.	+	0	Parent=comp58072_c0_seq1.mrna1
Chr1	gffcl	locus	138381703	138385022	.	-	.	ID=RLOC_00011696;geneIDs=FBgn0000524.1.path1;transcripts=FBgn0000524.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138381703	138385022	.	-	.	ID=FBgn0000524.1.mrna1;geneID=FBgn0000524.1.path1;Name=FBgn0000524.1;Dir=sensecoverage=100.0;identity=99.3;matches=1985;mismatches=13;indels=0;unknowns=0;locus=RLOC_00011696
Chr1	stalkie_big_nohaplotig	exon	138381703	138382000	98	-	.	Parent=FBgn0000524.1.mrna1;Target=FBgn0000524.1 1701 1998 +
Chr1	stalkie_big_nohaplotig	exon	138382062	138382204	99	-	.	Parent=FBgn0000524.1.mrna1;Target=FBgn0000524.1 1558 1700 +
Chr1	stalkie_big_nohaplotig	exon	138383326	138384296	99	-	.	Parent=FBgn0000524.1.mrna1;Target=FBgn0000524.1 587 1557 +
Chr1	stalkie_big_nohaplotig	exon	138384377	138384551	100	-	.	Parent=FBgn0000524.1.mrna1;Target=FBgn0000524.1 412 586 +
Chr1	stalkie_big_nohaplotig	exon	138384612	138385022	99	-	.	Parent=FBgn0000524.1.mrna1;Target=FBgn0000524.1 1 411 +
Chr1	stalkie_big_nohaplotig	CDS	138381703	138382000	.	-	1	Parent=FBgn0000524.1.mrna1;Target=FBgn0000524.1 1701 1998 +
Chr1	stalkie_big_nohaplotig	CDS	138382062	138382204	.	-	0	Parent=FBgn0000524.1.mrna1;Target=FBgn0000524.1 1558 1700 +
Chr1	stalkie_big_nohaplotig	CDS	138383326	138384296	.	-	2	Parent=FBgn0000524.1.mrna1;Target=FBgn0000524.1 587 1557 +
Chr1	stalkie_big_nohaplotig	CDS	138384377	138384551	.	-	0	Parent=FBgn0000524.1.mrna1;Target=FBgn0000524.1 412 586 +
Chr1	stalkie_big_nohaplotig	CDS	138384612	138385022	.	-	0	Parent=FBgn0000524.1.mrna1;Target=FBgn0000524.1 1 411 +
Chr1	gffcl	locus	138386842	138403830	.	+	.	ID=RLOC_00011697;geneIDs=FBgn0014026.1.path1;transcripts=FBgn0014026.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138386842	138403830	.	+	.	ID=FBgn0014026.1.mrna1;geneID=FBgn0014026.1.path1;Name=FBgn0014026.1;Dir=sensecoverage=100.0;identity=99.8;matches=823;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011697
Chr1	stalkie_big_nohaplotig	exon	138386842	138386868	100	+	.	Parent=FBgn0014026.1.mrna1;Target=FBgn0014026.1 1 27 +
Chr1	stalkie_big_nohaplotig	exon	138387035	138387158	100	+	.	Parent=FBgn0014026.1.mrna1;Target=FBgn0014026.1 28 151 +
Chr1	stalkie_big_nohaplotig	exon	138387222	138387524	100	+	.	Parent=FBgn0014026.1.mrna1;Target=FBgn0014026.1 152 454 +
Chr1	stalkie_big_nohaplotig	exon	138403251	138403318	100	+	.	Parent=FBgn0014026.1.mrna1;Target=FBgn0014026.1 455 522 +
Chr1	stalkie_big_nohaplotig	exon	138403528	138403830	99	+	.	Parent=FBgn0014026.1.mrna1;Target=FBgn0014026.1 523 825 +
Chr1	stalkie_big_nohaplotig	CDS	138386842	138386868	.	+	0	Parent=FBgn0014026.1.mrna1;Target=FBgn0014026.1 1 27 +
Chr1	stalkie_big_nohaplotig	CDS	138387035	138387158	.	+	0	Parent=FBgn0014026.1.mrna1;Target=FBgn0014026.1 28 151 +
Chr1	stalkie_big_nohaplotig	CDS	138387222	138387524	.	+	2	Parent=FBgn0014026.1.mrna1;Target=FBgn0014026.1 152 454 +
Chr1	stalkie_big_nohaplotig	CDS	138403251	138403318	.	+	2	Parent=FBgn0014026.1.mrna1;Target=FBgn0014026.1 455 522 +
Chr1	stalkie_big_nohaplotig	CDS	138403528	138403830	.	+	0	Parent=FBgn0014026.1.mrna1;Target=FBgn0014026.1 523 825 +
Chr1	gffcl	locus	138390706	138408598	.	+	.	ID=RLOC_00011698;geneIDs=comp117986_c0_seq1.path1;transcripts=comp117986_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138390706	138408598	.	+	.	ID=comp117986_c0_seq1.mrna1;geneID=comp117986_c0_seq1.path1;Name=comp117986_c0_seq1;Dir=indeterminatecoverage=96.4;identity=99.8;matches=665;mismatches=1;indels=0;unknowns=0;Target=comp117986_c0_seq1 104 27 .;locus=RLOC_00011698
Chr1	stalkie_big_nohaplotig	exon	138390706	138391172	99	+	.	Parent=comp117986_c0_seq1.mrna1;Target=comp117986_c0_seq1 492 26 .
Chr1	stalkie_big_nohaplotig	exon	138408400	138408598	100	+	.	Parent=comp117986_c0_seq1.mrna1;Target=comp117986_c0_seq1 691 493 .
Chr1	stalkie_big_nohaplotig	CDS	138390707	138390784	.	+	0	Parent=comp117986_c0_seq1.mrna1
Chr1	gffcl	locus	138393771	138394135	.	+	.	ID=RLOC_00011699;geneIDs=comp58072_c0_seq1.path2;transcripts=comp58072_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	138393771	138394135	.	+	.	ID=comp58072_c0_seq1.mrna2;geneID=comp58072_c0_seq1.path2;Name=comp58072_c0_seq1;Dir=indeterminatecoverage=92.6;identity=99.7;matches=364;mismatches=1;indels=0;unknowns=0;Target=comp58072_c0_seq1 383 19 .;CDS_Target=comp58072_c0_seq1 297 46 .;locus=RLOC_00011699
Chr1	stalkie_big_nohaplotig	exon	138393771	138394135	99	+	.	Parent=comp58072_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	138393798	138394049	.	+	0	Parent=comp58072_c0_seq1.mrna2
Chr1	gffcl	locus	138408693	138424832	.	+	.	ID=RLOC_00011700;geneIDs=FBgn0025836.1.path1;transcripts=FBgn0025836.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138408693	138424832	.	+	.	ID=FBgn0025836.1.mrna1;geneID=FBgn0025836.1.path1;Name=FBgn0025836.1;Dir=sensecoverage=100.0;identity=99.6;matches=3071;mismatches=12;indels=0;unknowns=0;locus=RLOC_00011700
Chr1	stalkie_big_nohaplotig	exon	138408693	138409019	99	+	.	Parent=FBgn0025836.1.mrna1;Target=FBgn0025836.1 1 327 +
Chr1	stalkie_big_nohaplotig	exon	138418532	138418604	100	+	.	Parent=FBgn0025836.1.mrna1;Target=FBgn0025836.1 328 400 +
Chr1	stalkie_big_nohaplotig	exon	138418895	138418907	92	+	.	Parent=FBgn0025836.1.mrna1;Target=FBgn0025836.1 401 413 +
Chr1	stalkie_big_nohaplotig	exon	138418923	138419212	100	+	.	Parent=FBgn0025836.1.mrna1;Target=FBgn0025836.1 1504 1793 +
Chr1	stalkie_big_nohaplotig	exon	138419286	138419406	100	+	.	Parent=FBgn0025836.1.mrna1;Target=FBgn0025836.1 1794 1914 +
Chr1	stalkie_big_nohaplotig	exon	138419699	138419719	100	+	.	Parent=FBgn0025836.1.mrna1;Target=FBgn0025836.1 1915 1935 +
Chr1	stalkie_big_nohaplotig	exon	138421172	138421270	98	+	.	Parent=FBgn0025836.1.mrna1;Target=FBgn0025836.1 1936 2034 +
Chr1	stalkie_big_nohaplotig	exon	138421336	138422343	99	+	.	Parent=FBgn0025836.1.mrna1;Target=FBgn0025836.1 2035 3042 +
Chr1	stalkie_big_nohaplotig	exon	138422406	138422789	98	+	.	Parent=FBgn0025836.1.mrna1;Target=FBgn0025836.1 3043 3426 +
Chr1	stalkie_big_nohaplotig	exon	138422857	138423026	99	+	.	Parent=FBgn0025836.1.mrna1;Target=FBgn0025836.1 3427 3596 +
Chr1	stalkie_big_nohaplotig	exon	138423090	138423229	100	+	.	Parent=FBgn0025836.1.mrna1;Target=FBgn0025836.1 3597 3736 +
Chr1	stalkie_big_nohaplotig	exon	138423295	138423544	100	+	.	Parent=FBgn0025836.1.mrna1;Target=FBgn0025836.1 3737 3986 +
Chr1	stalkie_big_nohaplotig	exon	138424646	138424832	100	+	.	Parent=FBgn0025836.1.mrna1;Target=FBgn0025836.1 3987 4173 +
Chr1	stalkie_big_nohaplotig	CDS	138421262	138421270	.	+	0	Parent=FBgn0025836.1.mrna1;Target=FBgn0025836.1 2026 2034 +
Chr1	stalkie_big_nohaplotig	CDS	138421336	138422343	.	+	0	Parent=FBgn0025836.1.mrna1;Target=FBgn0025836.1 2035 3042 +
Chr1	stalkie_big_nohaplotig	CDS	138422406	138422789	.	+	0	Parent=FBgn0025836.1.mrna1;Target=FBgn0025836.1 3043 3426 +
Chr1	stalkie_big_nohaplotig	CDS	138422857	138423026	.	+	0	Parent=FBgn0025836.1.mrna1;Target=FBgn0025836.1 3427 3596 +
Chr1	stalkie_big_nohaplotig	CDS	138423090	138423229	.	+	1	Parent=FBgn0025836.1.mrna1;Target=FBgn0025836.1 3597 3736 +
Chr1	stalkie_big_nohaplotig	CDS	138423295	138423544	.	+	2	Parent=FBgn0025836.1.mrna1;Target=FBgn0025836.1 3737 3986 +
Chr1	stalkie_big_nohaplotig	CDS	138424646	138424832	.	+	1	Parent=FBgn0025836.1.mrna1;Target=FBgn0025836.1 3987 4173 +
Chr1	gffcl	locus	138412370	138412740	.	+	.	ID=RLOC_00011701;geneIDs=comp69546_c0_seq1.path1;transcripts=comp69546_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138412370	138412740	.	+	.	ID=comp69546_c0_seq1.mrna1;geneID=comp69546_c0_seq1.path1;Name=comp69546_c0_seq1;Dir=indeterminatecoverage=93.7;identity=100.0;matches=371;mismatches=0;indels=0;unknowns=0;Target=comp69546_c0_seq1 371 1 .;CDS_Target=comp69546_c0_seq1 77 3 .;locus=RLOC_00011701
Chr1	stalkie_big_nohaplotig	exon	138412370	138412740	100	+	.	Parent=comp69546_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138412372	138412446	.	+	0	Parent=comp69546_c0_seq1.mrna1
Chr1	gffcl	locus	138412843	138413357	.	-	.	ID=RLOC_00011702;geneIDs=comp145975_c0_seq1.path1;transcripts=comp145975_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138412843	138413357	.	-	.	ID=comp145975_c0_seq1.mrna1;geneID=comp145975_c0_seq1.path1;Name=comp145975_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=512;mismatches=3;indels=2;unknowns=0;Target=comp145975_c0_seq1 517 1 .;CDS_Target=comp145975_c0_seq1 54 1 .;locus=RLOC_00011702
Chr1	stalkie_big_nohaplotig	exon	138412843	138413357	99	-	.	Parent=comp145975_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138413306	138413357	.	-	0	Parent=comp145975_c0_seq1.mrna1
Chr1	gffcl	locus	138425858	138429901	.	-	.	ID=RLOC_00011703;geneIDs=FBgn0036018.1.path1;transcripts=FBgn0036018.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138425858	138429901	.	-	.	ID=FBgn0036018.1.mrna1;geneID=FBgn0036018.1.path1;Name=FBgn0036018.1;Dir=sensecoverage=100.0;identity=98.9;matches=2725;mismatches=20;indels=9;unknowns=0;locus=RLOC_00011703
Chr1	stalkie_big_nohaplotig	exon	138425858	138426179	99	-	.	Parent=FBgn0036018.1.mrna1;Target=FBgn0036018.1 2433 2754 +
Chr1	stalkie_big_nohaplotig	exon	138427304	138427420	100	-	.	Parent=FBgn0036018.1.mrna1;Target=FBgn0036018.1 2316 2432 +
Chr1	stalkie_big_nohaplotig	exon	138427487	138428283	97	-	.	Parent=FBgn0036018.1.mrna1;Target=FBgn0036018.1 1510 2315 +
Chr1	stalkie_big_nohaplotig	exon	138428340	138429800	99	-	.	Parent=FBgn0036018.1.mrna1;Target=FBgn0036018.1 49 1509 +
Chr1	stalkie_big_nohaplotig	exon	138429854	138429901	100	-	.	Parent=FBgn0036018.1.mrna1;Target=FBgn0036018.1 1 48 +
Chr1	stalkie_big_nohaplotig	CDS	138425858	138426179	.	-	1	Parent=FBgn0036018.1.mrna1;Target=FBgn0036018.1 2433 2754 +
Chr1	stalkie_big_nohaplotig	CDS	138427304	138427420	.	-	1	Parent=FBgn0036018.1.mrna1;Target=FBgn0036018.1 2316 2432 +
Chr1	stalkie_big_nohaplotig	CDS	138427487	138428283	.	-	0	Parent=FBgn0036018.1.mrna1;Target=FBgn0036018.1 1510 2315 +
Chr1	stalkie_big_nohaplotig	CDS	138428340	138429800	.	-	0	Parent=FBgn0036018.1.mrna1;Target=FBgn0036018.1 49 1509 +
Chr1	stalkie_big_nohaplotig	CDS	138429854	138429901	.	-	0	Parent=FBgn0036018.1.mrna1;Target=FBgn0036018.1 1 48 +
Chr1	gffcl	locus	138432768	138433732	.	+	.	ID=RLOC_00011704;geneIDs=FBgn0030101.1.path1;transcripts=FBgn0030101.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138432768	138433732	.	+	.	ID=FBgn0030101.1.mrna1;geneID=FBgn0030101.1.path1;Name=FBgn0030101.1;Dir=sensecoverage=100.0;identity=99.2;matches=792;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011704
Chr1	stalkie_big_nohaplotig	exon	138432768	138432948	100	+	.	Parent=FBgn0030101.1.mrna1;Target=FBgn0030101.1 1 181 +
Chr1	stalkie_big_nohaplotig	exon	138433015	138433181	100	+	.	Parent=FBgn0030101.1.mrna1;Target=FBgn0030101.1 182 348 +
Chr1	stalkie_big_nohaplotig	exon	138433231	138433395	98	+	.	Parent=FBgn0030101.1.mrna1;Target=FBgn0030101.1 349 513 +
Chr1	stalkie_big_nohaplotig	exon	138433448	138433732	98	+	.	Parent=FBgn0030101.1.mrna1;Target=FBgn0030101.1 514 798 +
Chr1	stalkie_big_nohaplotig	CDS	138432768	138432948	.	+	0	Parent=FBgn0030101.1.mrna1;Target=FBgn0030101.1 1 181 +
Chr1	stalkie_big_nohaplotig	CDS	138433015	138433181	.	+	2	Parent=FBgn0030101.1.mrna1;Target=FBgn0030101.1 182 348 +
Chr1	stalkie_big_nohaplotig	CDS	138433231	138433395	.	+	0	Parent=FBgn0030101.1.mrna1;Target=FBgn0030101.1 349 513 +
Chr1	stalkie_big_nohaplotig	CDS	138433448	138433732	.	+	0	Parent=FBgn0030101.1.mrna1;Target=FBgn0030101.1 514 798 +
Chr1	gffcl	locus	138434178	138434849	.	-	.	ID=RLOC_00011705;geneIDs=FBgn0030100.1.path1;transcripts=FBgn0030100.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138434178	138434849	.	-	.	ID=FBgn0030100.1.mrna1;geneID=FBgn0030100.1.path1;Name=FBgn0030100.1;Dir=sensecoverage=100.0;identity=99.7;matches=613;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011705
Chr1	stalkie_big_nohaplotig	exon	138434178	138434638	99	-	.	Parent=FBgn0030100.1.mrna1;Target=FBgn0030100.1 155 615 +
Chr1	stalkie_big_nohaplotig	exon	138434696	138434849	100	-	.	Parent=FBgn0030100.1.mrna1;Target=FBgn0030100.1 1 154 +
Chr1	stalkie_big_nohaplotig	CDS	138434178	138434638	.	-	2	Parent=FBgn0030100.1.mrna1;Target=FBgn0030100.1 155 615 +
Chr1	stalkie_big_nohaplotig	CDS	138434696	138434849	.	-	0	Parent=FBgn0030100.1.mrna1;Target=FBgn0030100.1 1 154 +
Chr1	gffcl	locus	138435145	138436772	.	+	.	ID=RLOC_00011706;geneIDs=FBgn0021874.1.path1;transcripts=FBgn0021874.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138435145	138436772	.	+	.	ID=FBgn0021874.1.mrna1;geneID=FBgn0021874.1.path1;Name=FBgn0021874.1;Dir=sensecoverage=99.3;identity=99.7;matches=1450;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011706
Chr1	stalkie_big_nohaplotig	exon	138435145	138435889	99	+	.	Parent=FBgn0021874.1.mrna1;Target=FBgn0021874.1 1 745 +
Chr1	stalkie_big_nohaplotig	exon	138435948	138436178	100	+	.	Parent=FBgn0021874.1.mrna1;Target=FBgn0021874.1 746 976 +
Chr1	stalkie_big_nohaplotig	exon	138436239	138436589	100	+	.	Parent=FBgn0021874.1.mrna1;Target=FBgn0021874.1 977 1327 +
Chr1	stalkie_big_nohaplotig	exon	138436646	138436772	99	+	.	Parent=FBgn0021874.1.mrna1;Target=FBgn0021874.1 1328 1454 +
Chr1	stalkie_big_nohaplotig	CDS	138435145	138435889	.	+	0	Parent=FBgn0021874.1.mrna1;Target=FBgn0021874.1 1 745 +
Chr1	stalkie_big_nohaplotig	CDS	138435948	138436178	.	+	2	Parent=FBgn0021874.1.mrna1;Target=FBgn0021874.1 746 976 +
Chr1	stalkie_big_nohaplotig	CDS	138436239	138436589	.	+	2	Parent=FBgn0021874.1.mrna1;Target=FBgn0021874.1 977 1327 +
Chr1	stalkie_big_nohaplotig	CDS	138436646	138436770	.	+	2	Parent=FBgn0021874.1.mrna1;Target=FBgn0021874.1 1328 1452 +
Chr1	gffcl	locus	138437214	138439349	.	-	.	ID=RLOC_00011707;geneIDs=FBgn0031265.1.path1;transcripts=FBgn0031265.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138437214	138439349	.	-	.	ID=FBgn0031265.1.mrna1;geneID=FBgn0031265.1.path1;Name=FBgn0031265.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=2123;mismatches=13;indels=0;unknowns=0;Target=FBgn0031265.1 2136 1 .;locus=RLOC_00011707
Chr1	stalkie_big_nohaplotig	exon	138437214	138439349	99	-	.	Parent=FBgn0031265.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138437214	138439349	.	-	0	Parent=FBgn0031265.1.mrna1
Chr1	gffcl	locus	138474161	138474811	.	-	.	ID=RLOC_00011708;geneIDs=FBgn0031263.1.path1;transcripts=FBgn0031263.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138474161	138474811	.	-	.	ID=FBgn0031263.1.mrna1;geneID=FBgn0031263.1.path1;Name=FBgn0031263.1;Dir=sensecoverage=100.0;identity=99.3;matches=569;mismatches=3;indels=1;unknowns=0;Target=FBgn0031263.1 3 26 +;locus=RLOC_00011708
Chr1	stalkie_big_nohaplotig	exon	138474161	138474385	99	-	.	Parent=FBgn0031263.1.mrna1;Target=FBgn0031263.1 349 573 +
Chr1	stalkie_big_nohaplotig	exon	138474465	138474811	99	-	.	Parent=FBgn0031263.1.mrna1;Target=FBgn0031263.1 1 348 +
Chr1	stalkie_big_nohaplotig	CDS	138474787	138474809	.	-	0	Parent=FBgn0031263.1.mrna1
Chr1	gffcl	locus	138501473	138502609	.	-	.	ID=RLOC_00011709;geneIDs=ORF1332.path1;transcripts=ORF1332.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138501473	138502609	.	-	.	ID=ORF1332.mrna1;geneID=ORF1332.path1;Name=ORF1332;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1128;mismatches=9;indels=0;unknowns=0;Target=ORF1332 1137 1 .;locus=RLOC_00011709
Chr1	stalkie_big_nohaplotig	exon	138501473	138502609	99	-	.	Parent=ORF1332.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138501473	138502609	.	-	0	Parent=ORF1332.mrna1
Chr1	gffcl	locus	138505436	138517048	.	.	.	ID=RLOC_00011710;geneIDs=FBgn0015623.1.path1,comp111340_c0_seq1.path1,comp146577_c0_seq1.path1;transcripts=FBgn0015623.1.mrna1,comp146577_c0_seq1.mrna1,comp111340_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138505436	138517048	.	+	.	ID=FBgn0015623.1.mrna1;geneID=FBgn0015623.1.path1;Name=FBgn0015623.1;Dir=sensecoverage=100.0;identity=99.6;matches=2020;mismatches=8;indels=0;unknowns=0;locus=RLOC_00011710
Chr1	stalkie_big_nohaplotig	exon	138505436	138505605	100	+	.	Parent=FBgn0015623.1.mrna1;Target=FBgn0015623.1 1 170 +
Chr1	stalkie_big_nohaplotig	exon	138505668	138505860	100	+	.	Parent=FBgn0015623.1.mrna1;Target=FBgn0015623.1 171 363 +
Chr1	stalkie_big_nohaplotig	exon	138505925	138506074	100	+	.	Parent=FBgn0015623.1.mrna1;Target=FBgn0015623.1 364 513 +
Chr1	stalkie_big_nohaplotig	exon	138514505	138514629	100	+	.	Parent=FBgn0015623.1.mrna1;Target=FBgn0015623.1 514 638 +
Chr1	stalkie_big_nohaplotig	exon	138515470	138516226	99	+	.	Parent=FBgn0015623.1.mrna1;Target=FBgn0015623.1 639 1395 +
Chr1	stalkie_big_nohaplotig	exon	138516288	138516620	99	+	.	Parent=FBgn0015623.1.mrna1;Target=FBgn0015623.1 1396 1728 +
Chr1	stalkie_big_nohaplotig	exon	138516680	138516837	100	+	.	Parent=FBgn0015623.1.mrna1;Target=FBgn0015623.1 1729 1886 +
Chr1	stalkie_big_nohaplotig	exon	138516907	138517048	100	+	.	Parent=FBgn0015623.1.mrna1;Target=FBgn0015623.1 1887 2028 +
Chr1	stalkie_big_nohaplotig	CDS	138505436	138505605	.	+	0	Parent=FBgn0015623.1.mrna1;Target=FBgn0015623.1 1 170 +
Chr1	stalkie_big_nohaplotig	CDS	138505668	138505860	.	+	1	Parent=FBgn0015623.1.mrna1;Target=FBgn0015623.1 171 363 +
Chr1	stalkie_big_nohaplotig	CDS	138505925	138506074	.	+	0	Parent=FBgn0015623.1.mrna1;Target=FBgn0015623.1 364 513 +
Chr1	stalkie_big_nohaplotig	CDS	138514505	138514629	.	+	0	Parent=FBgn0015623.1.mrna1;Target=FBgn0015623.1 514 638 +
Chr1	stalkie_big_nohaplotig	CDS	138515470	138516226	.	+	1	Parent=FBgn0015623.1.mrna1;Target=FBgn0015623.1 639 1395 +
Chr1	stalkie_big_nohaplotig	CDS	138516288	138516620	.	+	0	Parent=FBgn0015623.1.mrna1;Target=FBgn0015623.1 1396 1728 +
Chr1	stalkie_big_nohaplotig	CDS	138516680	138516837	.	+	0	Parent=FBgn0015623.1.mrna1;Target=FBgn0015623.1 1729 1886 +
Chr1	stalkie_big_nohaplotig	CDS	138516907	138517048	.	+	1	Parent=FBgn0015623.1.mrna1;Target=FBgn0015623.1 1887 2028 +
Chr1	stalkie_big_nohaplotig	mRNA	138514021	138514527	.	+	.	ID=comp146577_c0_seq1.mrna1;geneID=comp146577_c0_seq1.path1;Name=comp146577_c0_seq1;Dir=antisensecoverage=100.0;identity=98.4;matches=316;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011710
Chr1	stalkie_big_nohaplotig	exon	138514021	138514318	98	+	.	Parent=comp146577_c0_seq1.mrna1;Target=comp146577_c0_seq1 24 321 -
Chr1	stalkie_big_nohaplotig	exon	138514505	138514527	100	+	.	Parent=comp146577_c0_seq1.mrna1;Target=comp146577_c0_seq1 1 23 -
Chr1	stalkie_big_nohaplotig	CDS	138514188	138514318	.	+	0	Parent=comp146577_c0_seq1.mrna1;Target=comp146577_c0_seq1 24 154 .
Chr1	stalkie_big_nohaplotig	CDS	138514505	138514526	.	+	1	Parent=comp146577_c0_seq1.mrna1;Target=comp146577_c0_seq1 2 23 .
Chr1	stalkie_big_nohaplotig	mRNA	138515015	138515492	.	-	.	ID=comp111340_c0_seq1.mrna1;geneID=comp111340_c0_seq1.path1;Name=comp111340_c0_seq1;Dir=indeterminatecoverage=100.0;identity=89.5;matches=434;mismatches=40;indels=11;unknowns=0;Target=comp111340_c0_seq1 481 1 .;CDS_Target=comp111340_c0_seq1 284 243 .;locus=RLOC_00011710
Chr1	stalkie_big_nohaplotig	exon	138515015	138515492	89	-	.	Parent=comp111340_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138515215	138515249	.	-	0	Parent=comp111340_c0_seq1.mrna1
Chr1	gffcl	locus	138525689	138528154	.	.	.	ID=RLOC_00011711;geneIDs=FBgn0004367.path1,comp163807_c1_seq1.path1;transcripts=FBgn0004367.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138525689	138528154	.	+	.	ID=FBgn0004367.mrna1;geneID=FBgn0004367.path1;Name=FBgn0004367;Dir=indeterminatecoverage=100.0;identity=99.7;matches=2452;mismatches=7;indels=0;unknowns=7;Target=FBgn0004367 2466 1 .;locus=RLOC_00011711
Chr1	stalkie_big_nohaplotig	exon	138525689	138528154	99	+	.	Parent=FBgn0004367.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138525689	138528154	.	+	0	Parent=FBgn0004367.mrna1
Chr1	gffcl	locus	138533429	138534304	.	-	.	ID=RLOC_00011712;geneIDs=comp114839_c0_seq1.path1;transcripts=comp114839_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138533429	138534304	.	-	.	ID=comp114839_c0_seq1.mrna1;geneID=comp114839_c0_seq1.path1;Name=comp114839_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.0;matches=868;mismatches=8;indels=1;unknowns=0;Target=comp114839_c0_seq1 881 5 .;CDS_Target=comp114839_c0_seq1 356 6 .;locus=RLOC_00011712
Chr1	stalkie_big_nohaplotig	exon	138533429	138534304	98	-	.	Parent=comp114839_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138533954	138534303	.	-	0	Parent=comp114839_c0_seq1.mrna1
Chr1	gffcl	locus	138542779	138544232	.	-	.	ID=RLOC_00011713;geneIDs=FBgn0030895.1.path1;transcripts=FBgn0030895.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138542779	138544232	.	-	.	ID=FBgn0030895.1.mrna1;geneID=FBgn0030895.1.path1;Name=FBgn0030895.1;Dir=sensecoverage=100.0;identity=98.8;matches=1260;mismatches=15;indels=0;unknowns=0;locus=RLOC_00011713
Chr1	stalkie_big_nohaplotig	exon	138542779	138543189	99	-	.	Parent=FBgn0030895.1.mrna1;Target=FBgn0030895.1 865 1275 +
Chr1	stalkie_big_nohaplotig	exon	138543246	138543551	98	-	.	Parent=FBgn0030895.1.mrna1;Target=FBgn0030895.1 559 864 +
Chr1	stalkie_big_nohaplotig	exon	138543609	138543777	100	-	.	Parent=FBgn0030895.1.mrna1;Target=FBgn0030895.1 390 558 +
Chr1	stalkie_big_nohaplotig	exon	138543844	138544232	98	-	.	Parent=FBgn0030895.1.mrna1;Target=FBgn0030895.1 1 389 +
Chr1	stalkie_big_nohaplotig	CDS	138542779	138543189	.	-	0	Parent=FBgn0030895.1.mrna1;Target=FBgn0030895.1 865 1275 +
Chr1	stalkie_big_nohaplotig	CDS	138543246	138543551	.	-	0	Parent=FBgn0030895.1.mrna1;Target=FBgn0030895.1 559 864 +
Chr1	stalkie_big_nohaplotig	CDS	138543609	138543777	.	-	1	Parent=FBgn0030895.1.mrna1;Target=FBgn0030895.1 390 558 +
Chr1	stalkie_big_nohaplotig	CDS	138543844	138544232	.	-	0	Parent=FBgn0030895.1.mrna1;Target=FBgn0030895.1 1 389 +
Chr1	gffcl	locus	138547113	138549995	.	-	.	ID=RLOC_00011714;geneIDs=FBgn0031801.1.path1;transcripts=FBgn0031801.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138547113	138549995	.	-	.	ID=FBgn0031801.1.mrna1;geneID=FBgn0031801.1.path1;Name=FBgn0031801.1;Dir=sensecoverage=100.0;identity=99.4;matches=1190;mismatches=7;indels=0;unknowns=0;locus=RLOC_00011714
Chr1	stalkie_big_nohaplotig	exon	138547113	138547436	99	-	.	Parent=FBgn0031801.1.mrna1;Target=FBgn0031801.1 874 1197 +
Chr1	stalkie_big_nohaplotig	exon	138547508	138547825	100	-	.	Parent=FBgn0031801.1.mrna1;Target=FBgn0031801.1 556 873 +
Chr1	stalkie_big_nohaplotig	exon	138549379	138549547	98	-	.	Parent=FBgn0031801.1.mrna1;Target=FBgn0031801.1 387 555 +
Chr1	stalkie_big_nohaplotig	exon	138549610	138549995	99	-	.	Parent=FBgn0031801.1.mrna1;Target=FBgn0031801.1 1 386 +
Chr1	stalkie_big_nohaplotig	CDS	138547113	138547436	.	-	0	Parent=FBgn0031801.1.mrna1;Target=FBgn0031801.1 874 1197 +
Chr1	stalkie_big_nohaplotig	CDS	138547508	138547825	.	-	0	Parent=FBgn0031801.1.mrna1;Target=FBgn0031801.1 556 873 +
Chr1	stalkie_big_nohaplotig	CDS	138549379	138549547	.	-	1	Parent=FBgn0031801.1.mrna1;Target=FBgn0031801.1 387 555 +
Chr1	stalkie_big_nohaplotig	CDS	138549610	138549995	.	-	0	Parent=FBgn0031801.1.mrna1;Target=FBgn0031801.1 1 386 +
Chr1	gffcl	locus	138555820	138556105	.	-	.	ID=RLOC_00011715;geneIDs=comp135867_c0_seq1.path1;transcripts=comp135867_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138555820	138556105	.	-	.	ID=comp135867_c0_seq1.mrna1;geneID=comp135867_c0_seq1.path1;Name=comp135867_c0_seq1;Dir=indeterminatecoverage=89.4;identity=95.5;matches=275;mismatches=11;indels=2;unknowns=0;Target=comp135867_c0_seq1 288 1 .;CDS_Target=comp135867_c0_seq1 164 87 .;locus=RLOC_00011715
Chr1	stalkie_big_nohaplotig	exon	138555820	138556105	95	-	.	Parent=comp135867_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138555944	138556019	.	-	0	Parent=comp135867_c0_seq1.mrna1
Chr1	gffcl	locus	138557033	138559305	.	-	.	ID=RLOC_00011716;geneIDs=FBgn0031801.2.path1;transcripts=FBgn0031801.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138557033	138559305	.	-	.	ID=FBgn0031801.2.mrna1;geneID=FBgn0031801.2.path1;Name=FBgn0031801.2;Dir=sensecoverage=100.0;identity=98.1;matches=1177;mismatches=22;indels=1;unknowns=0;Target=FBgn0031801.2 3 23 +;locus=RLOC_00011716
Chr1	stalkie_big_nohaplotig	exon	138557033	138557356	97	-	.	Parent=FBgn0031801.2.mrna1;Target=FBgn0031801.2 877 1200 +
Chr1	stalkie_big_nohaplotig	exon	138557420	138557737	98	-	.	Parent=FBgn0031801.2.mrna1;Target=FBgn0031801.2 559 876 +
Chr1	stalkie_big_nohaplotig	exon	138557803	138557971	98	-	.	Parent=FBgn0031801.2.mrna1;Target=FBgn0031801.2 390 558 +
Chr1	stalkie_big_nohaplotig	exon	138558918	138559305	98	-	.	Parent=FBgn0031801.2.mrna1;Target=FBgn0031801.2 1 389 +
Chr1	stalkie_big_nohaplotig	CDS	138559284	138559303	.	-	0	Parent=FBgn0031801.2.mrna1
Chr1	gffcl	locus	138596931	138597635	.	-	.	ID=RLOC_00011717;geneIDs=comp93990_c0_seq1.path1;transcripts=comp93990_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138596931	138597635	.	-	.	ID=comp93990_c0_seq1.mrna1;geneID=comp93990_c0_seq1.path1;Name=comp93990_c0_seq1;Dir=indeterminatecoverage=96.8;identity=91.5;matches=647;mismatches=51;indels=9;unknowns=0;Target=comp93990_c0_seq1 723 24 .;CDS_Target=comp93990_c0_seq1 597 526 .;locus=RLOC_00011717
Chr1	stalkie_big_nohaplotig	exon	138596931	138597635	91	-	.	Parent=comp93990_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138597056	138597129	.	-	0	Parent=comp93990_c0_seq1.mrna1
Chr1	gffcl	locus	138631590	138632285	.	+	.	ID=RLOC_00011718;geneIDs=FBgn0030722.4.path1;transcripts=FBgn0030722.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138631590	138632285	.	+	.	ID=FBgn0030722.4.mrna1;geneID=FBgn0030722.4.path1;Name=FBgn0030722.4;Dir=indeterminatecoverage=100.0;identity=98.6;matches=686;mismatches=10;indels=0;unknowns=0;Target=FBgn0030722.4 696 1 .;locus=RLOC_00011718
Chr1	stalkie_big_nohaplotig	exon	138631590	138632285	98	+	.	Parent=FBgn0030722.4.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138631590	138632285	.	+	0	Parent=FBgn0030722.4.mrna1
Chr1	gffcl	locus	138681283	138683702	.	-	.	ID=RLOC_00011719;geneIDs=FBgn0031689.3.path1;transcripts=FBgn0031689.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138681283	138683702	.	-	.	ID=FBgn0031689.3.mrna1;geneID=FBgn0031689.3.path1;Name=FBgn0031689.3;Dir=sensecoverage=99.9;identity=98.1;matches=1481;mismatches=29;indels=0;unknowns=0;locus=RLOC_00011719
Chr1	stalkie_big_nohaplotig	exon	138681283	138681443	100	-	.	Parent=FBgn0031689.3.mrna1;Target=FBgn0031689.3 1352 1512 +
Chr1	stalkie_big_nohaplotig	exon	138681502	138681771	97	-	.	Parent=FBgn0031689.3.mrna1;Target=FBgn0031689.3 1082 1351 +
Chr1	stalkie_big_nohaplotig	exon	138681887	138682001	97	-	.	Parent=FBgn0031689.3.mrna1;Target=FBgn0031689.3 967 1081 +
Chr1	stalkie_big_nohaplotig	exon	138682064	138682477	99	-	.	Parent=FBgn0031689.3.mrna1;Target=FBgn0031689.3 553 966 +
Chr1	stalkie_big_nohaplotig	exon	138682595	138682687	98	-	.	Parent=FBgn0031689.3.mrna1;Target=FBgn0031689.3 460 552 +
Chr1	stalkie_big_nohaplotig	exon	138682758	138682865	97	-	.	Parent=FBgn0031689.3.mrna1;Target=FBgn0031689.3 352 459 +
Chr1	stalkie_big_nohaplotig	exon	138683303	138683441	97	-	.	Parent=FBgn0031689.3.mrna1;Target=FBgn0031689.3 213 351 +
Chr1	stalkie_big_nohaplotig	exon	138683493	138683702	94	-	.	Parent=FBgn0031689.3.mrna1;Target=FBgn0031689.3 3 212 +
Chr1	stalkie_big_nohaplotig	CDS	138681283	138681443	.	-	2	Parent=FBgn0031689.3.mrna1;Target=FBgn0031689.3 1352 1512 +
Chr1	stalkie_big_nohaplotig	CDS	138681502	138681771	.	-	2	Parent=FBgn0031689.3.mrna1;Target=FBgn0031689.3 1082 1351 +
Chr1	stalkie_big_nohaplotig	CDS	138681887	138682001	.	-	0	Parent=FBgn0031689.3.mrna1;Target=FBgn0031689.3 967 1081 +
Chr1	stalkie_big_nohaplotig	CDS	138682064	138682477	.	-	0	Parent=FBgn0031689.3.mrna1;Target=FBgn0031689.3 553 966 +
Chr1	stalkie_big_nohaplotig	CDS	138682595	138682687	.	-	0	Parent=FBgn0031689.3.mrna1;Target=FBgn0031689.3 460 552 +
Chr1	stalkie_big_nohaplotig	CDS	138682758	138682865	.	-	0	Parent=FBgn0031689.3.mrna1;Target=FBgn0031689.3 352 459 +
Chr1	stalkie_big_nohaplotig	CDS	138683303	138683441	.	-	1	Parent=FBgn0031689.3.mrna1;Target=FBgn0031689.3 213 351 +
Chr1	stalkie_big_nohaplotig	CDS	138683493	138683701	.	-	0	Parent=FBgn0031689.3.mrna1;Target=FBgn0031689.3 4 212 +
Chr1	gffcl	locus	138682929	138683242	.	-	.	ID=RLOC_00011720;geneIDs=comp131286_c0_seq1.path1;transcripts=comp131286_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138682929	138683242	.	-	.	ID=comp131286_c0_seq1.mrna1;geneID=comp131286_c0_seq1.path1;Name=comp131286_c0_seq1;Dir=indeterminatecoverage=100.0;identity=89.2;matches=280;mismatches=12;indels=22;unknowns=0;Target=comp131286_c0_seq1 292 1 .;CDS_Target=comp131286_c0_seq1 66 1 .;locus=RLOC_00011720
Chr1	stalkie_big_nohaplotig	exon	138682929	138683242	89	-	.	Parent=comp131286_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138683177	138683242	.	-	0	Parent=comp131286_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138684000	138685286	.	-	.	ID=comp139910_c0_seq1.mrna1;geneID=comp139910_c0_seq1.path1;Name=comp139910_c0_seq1;Dir=antisensecoverage=100.0;identity=89.4;matches=1032;mismatches=50;indels=72;unknowns=0;Target=comp139910_c0_seq1 464 583 .;locus=RLOC_00011721
Chr1	stalkie_big_nohaplotig	exon	138684000	138684651	89	-	.	Parent=comp139910_c0_seq1.mrna1;Target=comp139910_c0_seq1 1 629 -
Chr1	stalkie_big_nohaplotig	exon	138684713	138684764	84	-	.	Parent=comp139910_c0_seq1.mrna1;Target=comp139910_c0_seq1 630 678 -
Chr1	stalkie_big_nohaplotig	exon	138684845	138685286	89	-	.	Parent=comp139910_c0_seq1.mrna1;Target=comp139910_c0_seq1 679 1090 -
Chr1	stalkie_big_nohaplotig	CDS	138684463	138684582	.	-	0	Parent=comp139910_c0_seq1.mrna1
Chr1	gffcl	locus	138693266	138696448	.	-	.	ID=RLOC_00011722;geneIDs=FBgn0031432.2.path1;transcripts=FBgn0031432.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138693266	138696448	.	-	.	ID=FBgn0031432.2.mrna1;geneID=FBgn0031432.2.path1;Name=FBgn0031432.2;Dir=sensecoverage=100.0;identity=98.6;matches=1219;mismatches=16;indels=1;unknowns=0;locus=RLOC_00011722
Chr1	stalkie_big_nohaplotig	exon	138693266	138693438	97	-	.	Parent=FBgn0031432.2.mrna1;Target=FBgn0031432.2 1064 1236 +
Chr1	stalkie_big_nohaplotig	exon	138693994	138694257	98	-	.	Parent=FBgn0031432.2.mrna1;Target=FBgn0031432.2 800 1063 +
Chr1	stalkie_big_nohaplotig	exon	138694335	138694458	98	-	.	Parent=FBgn0031432.2.mrna1;Target=FBgn0031432.2 676 799 +
Chr1	stalkie_big_nohaplotig	exon	138694514	138694933	99	-	.	Parent=FBgn0031432.2.mrna1;Target=FBgn0031432.2 256 675 +
Chr1	stalkie_big_nohaplotig	exon	138695002	138695103	98	-	.	Parent=FBgn0031432.2.mrna1;Target=FBgn0031432.2 154 255 +
Chr1	stalkie_big_nohaplotig	exon	138695251	138695361	98	-	.	Parent=FBgn0031432.2.mrna1;Target=FBgn0031432.2 42 153 +
Chr1	stalkie_big_nohaplotig	exon	138696408	138696448	100	-	.	Parent=FBgn0031432.2.mrna1;Target=FBgn0031432.2 1 41 +
Chr1	stalkie_big_nohaplotig	CDS	138695342	138695361	.	-	0	Parent=FBgn0031432.2.mrna1;Target=FBgn0031432.2 42 62 +
Chr1	stalkie_big_nohaplotig	CDS	138696408	138696446	.	-	0	Parent=FBgn0031432.2.mrna1;Target=FBgn0031432.2 3 41 +
Chr1	gffcl	locus	138769887	138770768	.	-	.	ID=RLOC_00011723;geneIDs=FBgn0039703.2.path1;transcripts=FBgn0039703.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138769887	138770768	.	-	.	ID=FBgn0039703.2.mrna1;geneID=FBgn0039703.2.path1;Name=FBgn0039703.2;Dir=indeterminatecoverage=100.0;identity=99.7;matches=879;mismatches=3;indels=0;unknowns=0;Target=FBgn0039703.2 882 1 .;locus=RLOC_00011723
Chr1	stalkie_big_nohaplotig	exon	138769887	138770768	99	-	.	Parent=FBgn0039703.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	138769887	138770768	.	-	0	Parent=FBgn0039703.2.mrna1
Chr1	gffcl	locus	138877252	138877551	.	+	.	ID=RLOC_00011724;geneIDs=comp158088_c0_seq1.path2;transcripts=comp158088_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	138877252	138877551	.	+	.	ID=comp158088_c0_seq1.mrna2;geneID=comp158088_c0_seq1.path2;Name=comp158088_c0_seq1;Dir=indeterminatecoverage=19.6;identity=94.3;matches=283;mismatches=16;indels=1;unknowns=0;Target=comp158088_c0_seq1 1524 1226 .;locus=RLOC_00011724
Chr1	stalkie_big_nohaplotig	exon	138877252	138877551	94	+	.	Parent=comp158088_c0_seq1.mrna2
Chr1	gffcl	locus	138884351	140646484	.	+	.	ID=RLOC_00011725;geneIDs=comp158088_c0_seq1.path1;transcripts=comp158088_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	138884351	140646484	.	+	.	ID=comp158088_c0_seq1.mrna1;geneID=comp158088_c0_seq1.path1;Name=comp158088_c0_seq1;Dir=indeterminatecoverage=80.1;identity=89.8;matches=1002;mismatches=50;indels=64;unknowns=0;locus=RLOC_00011725
Chr1	stalkie_big_nohaplotig	exon	138884351	138884556	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 210 5 .
Chr1	stalkie_big_nohaplotig	exon	138884627	138884731	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 315 211 .
Chr1	stalkie_big_nohaplotig	exon	138896361	138896551	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 506 316 .
Chr1	stalkie_big_nohaplotig	exon	138918894	138919080	96	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 694 507 .
Chr1	stalkie_big_nohaplotig	exon	138951547	138951565	42	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 734 695 .
Chr1	stalkie_big_nohaplotig	exon	138958492	138958504	84	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 747 735 .
Chr1	stalkie_big_nohaplotig	exon	139239242	139239245	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 751 748 .
Chr1	stalkie_big_nohaplotig	exon	140248864	140248870	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 758 752 .
Chr1	stalkie_big_nohaplotig	exon	140248878	140248888	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 779 769 .
Chr1	stalkie_big_nohaplotig	exon	140486595	140486598	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 785 782 .
Chr1	stalkie_big_nohaplotig	exon	140488952	140488959	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 793 786 .
Chr1	stalkie_big_nohaplotig	exon	140504059	140504060	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 795 794 .
Chr1	stalkie_big_nohaplotig	exon	140507031	140507041	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 806 796 .
Chr1	stalkie_big_nohaplotig	exon	140511702	140511710	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 815 807 .
Chr1	stalkie_big_nohaplotig	exon	140516820	140516829	90	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 836 827 .
Chr1	stalkie_big_nohaplotig	exon	140518011	140518012	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 838 837 .
Chr1	stalkie_big_nohaplotig	exon	140519987	140519996	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 848 839 .
Chr1	stalkie_big_nohaplotig	exon	140529280	140529343	47	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 929 849 .
Chr1	stalkie_big_nohaplotig	exon	140532803	140532812	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 939 930 .
Chr1	stalkie_big_nohaplotig	exon	140546729	140546734	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 963 958 .
Chr1	stalkie_big_nohaplotig	exon	140551160	140551167	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 991 984 .
Chr1	stalkie_big_nohaplotig	exon	140558665	140558670	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 1003 998 .
Chr1	stalkie_big_nohaplotig	exon	140564122	140564124	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 1006 1004 .
Chr1	stalkie_big_nohaplotig	exon	140568199	140568205	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 1013 1007 .
Chr1	stalkie_big_nohaplotig	exon	140576315	140576320	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 1019 1014 .
Chr1	stalkie_big_nohaplotig	exon	140577293	140577299	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 1026 1020 .
Chr1	stalkie_big_nohaplotig	exon	140581028	140581034	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 1033 1027 .
Chr1	stalkie_big_nohaplotig	exon	140582622	140582626	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 1038 1034 .
Chr1	stalkie_big_nohaplotig	exon	140585521	140585532	91	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 1050 1039 .
Chr1	stalkie_big_nohaplotig	exon	140598008	140598016	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 1077 1069 .
Chr1	stalkie_big_nohaplotig	exon	140603024	140603031	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 1098 1091 .
Chr1	stalkie_big_nohaplotig	exon	140604924	140604929	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 1104 1099 .
Chr1	stalkie_big_nohaplotig	exon	140608759	140608805	54	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 1172 1105 .
Chr1	stalkie_big_nohaplotig	exon	140613836	140613846	54	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 1196 1188 .
Chr1	stalkie_big_nohaplotig	exon	140618608	140618609	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 1198 1197 .
Chr1	stalkie_big_nohaplotig	exon	140622703	140622706	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 1202 1199 .
Chr1	stalkie_big_nohaplotig	exon	140637747	140637749	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 1205 1203 .
Chr1	stalkie_big_nohaplotig	exon	140641937	140641945	100	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 1214 1206 .
Chr1	stalkie_big_nohaplotig	exon	140646474	140646484	81	+	.	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 1225 1215 .
Chr1	stalkie_big_nohaplotig	CDS	138919043	138919080	.	+	0	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 694 656 .
Chr1	stalkie_big_nohaplotig	CDS	138951547	138951555	.	+	1	Parent=comp158088_c0_seq1.mrna1;Target=comp158088_c0_seq1 709 695 .
Chr1	gffcl	locus	138898643	138911063	.	-	.	ID=RLOC_00011726;geneIDs=FBgn0036659.1.path2;transcripts=FBgn0036659.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	138898643	138911063	.	-	.	ID=FBgn0036659.1.mrna2;geneID=FBgn0036659.1.path2;Name=FBgn0036659.1;Dir=sensecoverage=94.4;identity=99.6;matches=1590;mismatches=7;indels=0;unknowns=0;locus=RLOC_00011726
Chr1	stalkie_big_nohaplotig	exon	138898643	138898919	100	-	.	Parent=FBgn0036659.1.mrna2;Target=FBgn0036659.1 1416 1692 +
Chr1	stalkie_big_nohaplotig	exon	138899661	138899899	100	-	.	Parent=FBgn0036659.1.mrna2;Target=FBgn0036659.1 1177 1415 +
Chr1	stalkie_big_nohaplotig	exon	138901262	138901573	99	-	.	Parent=FBgn0036659.1.mrna2;Target=FBgn0036659.1 865 1176 +
Chr1	stalkie_big_nohaplotig	exon	138902358	138902930	99	-	.	Parent=FBgn0036659.1.mrna2;Target=FBgn0036659.1 292 864 +
Chr1	stalkie_big_nohaplotig	exon	138910868	138911063	99	-	.	Parent=FBgn0036659.1.mrna2;Target=FBgn0036659.1 96 291 +
Chr1	stalkie_big_nohaplotig	CDS	138898643	138898919	.	-	2	Parent=FBgn0036659.1.mrna2;Target=FBgn0036659.1 1416 1692 +
Chr1	stalkie_big_nohaplotig	CDS	138899661	138899899	.	-	1	Parent=FBgn0036659.1.mrna2;Target=FBgn0036659.1 1177 1415 +
Chr1	stalkie_big_nohaplotig	CDS	138901262	138901573	.	-	1	Parent=FBgn0036659.1.mrna2;Target=FBgn0036659.1 865 1176 +
Chr1	stalkie_big_nohaplotig	CDS	138902358	138902930	.	-	1	Parent=FBgn0036659.1.mrna2;Target=FBgn0036659.1 292 864 +
Chr1	stalkie_big_nohaplotig	CDS	138910868	138911063	.	-	2	Parent=FBgn0036659.1.mrna2;Target=FBgn0036659.1 96 291 +
Chr1	gffcl	locus	139068300	139115369	.	+	.	ID=RLOC_00011728;geneIDs=comp150569_c0_seq1.path1;transcripts=comp150569_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139068300	139115369	.	+	.	ID=comp150569_c0_seq1.mrna1;geneID=comp150569_c0_seq1.path1;Name=comp150569_c0_seq1;Dir=indeterminatecoverage=81.2;identity=99.6;matches=526;mismatches=2;indels=0;unknowns=0;Target=comp150569_c0_seq1 355 278 .;locus=RLOC_00011728
Chr1	stalkie_big_nohaplotig	exon	139068300	139068305	100	+	.	Parent=comp150569_c0_seq1.mrna1;Target=comp150569_c0_seq1 128 123 .
Chr1	stalkie_big_nohaplotig	exon	139073748	139073755	100	+	.	Parent=comp150569_c0_seq1.mrna1;Target=comp150569_c0_seq1 136 129 .
Chr1	stalkie_big_nohaplotig	exon	139077805	139077807	100	+	.	Parent=comp150569_c0_seq1.mrna1;Target=comp150569_c0_seq1 139 137 .
Chr1	stalkie_big_nohaplotig	exon	139085713	139085716	100	+	.	Parent=comp150569_c0_seq1.mrna1;Target=comp150569_c0_seq1 143 140 .
Chr1	stalkie_big_nohaplotig	exon	139090047	139090049	100	+	.	Parent=comp150569_c0_seq1.mrna1;Target=comp150569_c0_seq1 146 144 .
Chr1	stalkie_big_nohaplotig	exon	139093517	139093525	100	+	.	Parent=comp150569_c0_seq1.mrna1;Target=comp150569_c0_seq1 155 147 .
Chr1	stalkie_big_nohaplotig	exon	139106895	139106900	100	+	.	Parent=comp150569_c0_seq1.mrna1;Target=comp150569_c0_seq1 161 156 .
Chr1	stalkie_big_nohaplotig	exon	139109363	139109364	100	+	.	Parent=comp150569_c0_seq1.mrna1;Target=comp150569_c0_seq1 163 162 .
Chr1	stalkie_big_nohaplotig	exon	139109577	139109582	100	+	.	Parent=comp150569_c0_seq1.mrna1;Target=comp150569_c0_seq1 169 164 .
Chr1	stalkie_big_nohaplotig	exon	139114889	139115369	99	+	.	Parent=comp150569_c0_seq1.mrna1;Target=comp150569_c0_seq1 650 170 .
Chr1	stalkie_big_nohaplotig	CDS	139114997	139115074	.	+	0	Parent=comp150569_c0_seq1.mrna1
Chr1	gffcl	locus	139075008	139078430	.	-	.	ID=RLOC_00011729;geneIDs=comp158116_c0_seq1.path1;transcripts=comp158116_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139075008	139078430	.	-	.	ID=comp158116_c0_seq1.mrna1;geneID=comp158116_c0_seq1.path1;Name=comp158116_c0_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=1209;mismatches=4;indels=7;unknowns=0;Target=comp158116_c0_seq1 981 1220 .;locus=RLOC_00011729
Chr1	stalkie_big_nohaplotig	exon	139075008	139075422	98	-	.	Parent=comp158116_c0_seq1.mrna1;Target=comp158116_c0_seq1 1 422 -
Chr1	stalkie_big_nohaplotig	exon	139075885	139076051	100	-	.	Parent=comp158116_c0_seq1.mrna1;Target=comp158116_c0_seq1 423 589 -
Chr1	stalkie_big_nohaplotig	exon	139077800	139078430	99	-	.	Parent=comp158116_c0_seq1.mrna1;Target=comp158116_c0_seq1 590 1220 -
Chr1	stalkie_big_nohaplotig	CDS	139078191	139078430	.	-	0	Parent=comp158116_c0_seq1.mrna1
Chr1	gffcl	locus	139078417	139079469	.	+	.	ID=RLOC_00011730;geneIDs=comp155765_c0_seq1.path1;transcripts=comp155765_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139078417	139079469	.	+	.	ID=comp155765_c0_seq1.mrna1;geneID=comp155765_c0_seq1.path1;Name=comp155765_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=974;mismatches=11;indels=0;unknowns=0;locus=RLOC_00011730
Chr1	stalkie_big_nohaplotig	exon	139078417	139079223	99	+	.	Parent=comp155765_c0_seq1.mrna1;Target=comp155765_c0_seq1 179 985 -
Chr1	stalkie_big_nohaplotig	exon	139079292	139079469	95	+	.	Parent=comp155765_c0_seq1.mrna1;Target=comp155765_c0_seq1 1 178 -
Chr1	stalkie_big_nohaplotig	CDS	139079128	139079223	.	+	0	Parent=comp155765_c0_seq1.mrna1;Target=comp155765_c0_seq1 179 274 .
Chr1	stalkie_big_nohaplotig	CDS	139079292	139079405	.	+	0	Parent=comp155765_c0_seq1.mrna1;Target=comp155765_c0_seq1 65 178 .
Chr1	gffcl	locus	139111245	139111690	.	+	.	ID=RLOC_00011731;geneIDs=comp134765_c0_seq1.path1;transcripts=comp134765_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139111245	139111690	.	+	.	ID=comp134765_c0_seq1.mrna1;geneID=comp134765_c0_seq1.path1;Name=comp134765_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=444;mismatches=2;indels=0;unknowns=0;Target=comp134765_c0_seq1 446 1 .;CDS_Target=comp134765_c0_seq1 373 305 .;locus=RLOC_00011731
Chr1	stalkie_big_nohaplotig	exon	139111245	139111690	99	+	.	Parent=comp134765_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139111549	139111617	.	+	0	Parent=comp134765_c0_seq1.mrna1
Chr1	gffcl	locus	139112900	139114421	.	-	.	ID=RLOC_00011732;geneIDs=comp162642_c0_seq1.path1;transcripts=comp162642_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139112900	139114421	.	-	.	ID=comp162642_c0_seq1.mrna1;geneID=comp162642_c0_seq1.path1;Name=comp162642_c0_seq1;Dir=indeterminatecoverage=89.1;identity=97.1;matches=1475;mismatches=34;indels=10;unknowns=0;Target=comp162642_c0_seq1 743 588 .;locus=RLOC_00011732
Chr1	stalkie_big_nohaplotig	exon	139112900	139113420	94	-	.	Parent=comp162642_c0_seq1.mrna1;Target=comp162642_c0_seq1 1615 1089 .
Chr1	stalkie_big_nohaplotig	exon	139113433	139114421	98	-	.	Parent=comp162642_c0_seq1.mrna1;Target=comp162642_c0_seq1 997 7 .
Chr1	stalkie_big_nohaplotig	CDS	139113684	139113839	.	-	0	Parent=comp162642_c0_seq1.mrna1
Chr1	gffcl	locus	139115452	139116626	.	+	.	ID=RLOC_00011733;geneIDs=comp161663_c0_seq1.path1;transcripts=comp161663_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139115452	139116626	.	+	.	ID=comp161663_c0_seq1.mrna1;geneID=comp161663_c0_seq1.path1;Name=comp161663_c0_seq1;Dir=indeterminatecoverage=98.7;identity=96.1;matches=1155;mismatches=20;indels=27;unknowns=0;Target=comp161663_c0_seq1 1202 1 .;CDS_Target=comp161663_c0_seq1 1044 913 .;locus=RLOC_00011733
Chr1	stalkie_big_nohaplotig	exon	139115452	139116626	96	+	.	Parent=comp161663_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139116343	139116474	.	+	0	Parent=comp161663_c0_seq1.mrna1
Chr1	gffcl	locus	139118022	139261427	.	-	.	ID=RLOC_00011734;geneIDs=FBgn0030090.1.path1;transcripts=FBgn0030090.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139118022	139261427	.	-	.	ID=FBgn0030090.1.mrna1;geneID=FBgn0030090.1.path1;Name=FBgn0030090.1;Dir=sensecoverage=100.0;identity=99.9;matches=1274;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011734
Chr1	stalkie_big_nohaplotig	exon	139118022	139118669	100	-	.	Parent=FBgn0030090.1.mrna1;Target=FBgn0030090.1 628 1275 +
Chr1	stalkie_big_nohaplotig	exon	139133228	139133500	100	-	.	Parent=FBgn0030090.1.mrna1;Target=FBgn0030090.1 355 627 +
Chr1	stalkie_big_nohaplotig	exon	139219447	139219494	100	-	.	Parent=FBgn0030090.1.mrna1;Target=FBgn0030090.1 307 354 +
Chr1	stalkie_big_nohaplotig	exon	139261122	139261427	99	-	.	Parent=FBgn0030090.1.mrna1;Target=FBgn0030090.1 1 306 +
Chr1	stalkie_big_nohaplotig	CDS	139118022	139118669	.	-	0	Parent=FBgn0030090.1.mrna1;Target=FBgn0030090.1 628 1275 +
Chr1	stalkie_big_nohaplotig	CDS	139133228	139133500	.	-	0	Parent=FBgn0030090.1.mrna1;Target=FBgn0030090.1 355 627 +
Chr1	stalkie_big_nohaplotig	CDS	139219447	139219494	.	-	0	Parent=FBgn0030090.1.mrna1;Target=FBgn0030090.1 307 354 +
Chr1	stalkie_big_nohaplotig	CDS	139261122	139261427	.	-	0	Parent=FBgn0030090.1.mrna1;Target=FBgn0030090.1 1 306 +
Chr1	gffcl	locus	139280560	139283422	.	-	.	ID=RLOC_00011735;geneIDs=comp1016170_c0_seq1.path1;transcripts=comp1016170_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139280560	139283422	.	-	.	ID=comp1016170_c0_seq1.mrna1;geneID=comp1016170_c0_seq1.path1;Name=comp1016170_c0_seq1;Dir=sensecoverage=100.0;identity=99.1;matches=1622;mismatches=10;indels=5;unknowns=0;Target=comp1016170_c0_seq1 500 652 +;locus=RLOC_00011735
Chr1	stalkie_big_nohaplotig	exon	139280560	139281401	100	-	.	Parent=comp1016170_c0_seq1.mrna1;Target=comp1016170_c0_seq1 791 1632 +
Chr1	stalkie_big_nohaplotig	exon	139281656	139281721	100	-	.	Parent=comp1016170_c0_seq1.mrna1;Target=comp1016170_c0_seq1 725 790 +
Chr1	stalkie_big_nohaplotig	exon	139281777	139281810	100	-	.	Parent=comp1016170_c0_seq1.mrna1;Target=comp1016170_c0_seq1 691 724 +
Chr1	stalkie_big_nohaplotig	exon	139282728	139283422	97	-	.	Parent=comp1016170_c0_seq1.mrna1;Target=comp1016170_c0_seq1 1 690 +
Chr1	stalkie_big_nohaplotig	CDS	139282766	139282918	.	-	0	Parent=comp1016170_c0_seq1.mrna1
Chr1	gffcl	locus	139310141	139311095	.	-	.	ID=RLOC_00011736;geneIDs=ORF3007.path1;transcripts=ORF3007.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139310141	139311095	.	-	.	ID=ORF3007.mrna1;geneID=ORF3007.path1;Name=ORF3007;Dir=sensecoverage=100.0;identity=97.4;matches=764;mismatches=16;indels=4;unknowns=0;locus=RLOC_00011736
Chr1	stalkie_big_nohaplotig	exon	139310141	139310376	97	-	.	Parent=ORF3007.mrna1;Target=ORF3007 545 780 +
Chr1	stalkie_big_nohaplotig	exon	139310431	139310528	91	-	.	Parent=ORF3007.mrna1;Target=ORF3007 451 544 +
Chr1	stalkie_big_nohaplotig	exon	139310593	139310810	97	-	.	Parent=ORF3007.mrna1;Target=ORF3007 233 450 +
Chr1	stalkie_big_nohaplotig	exon	139310864	139311095	100	-	.	Parent=ORF3007.mrna1;Target=ORF3007 1 232 +
Chr1	stalkie_big_nohaplotig	CDS	139310141	139310376	.	-	1	Parent=ORF3007.mrna1;Target=ORF3007 545 780 +
Chr1	stalkie_big_nohaplotig	CDS	139310431	139310528	.	-	0	Parent=ORF3007.mrna1;Target=ORF3007 451 544 +
Chr1	stalkie_big_nohaplotig	CDS	139310593	139310810	.	-	2	Parent=ORF3007.mrna1;Target=ORF3007 233 450 +
Chr1	stalkie_big_nohaplotig	CDS	139310864	139311095	.	-	0	Parent=ORF3007.mrna1;Target=ORF3007 1 232 +
Chr1	gffcl	locus	139347778	139349160	.	+	.	ID=RLOC_00011737;geneIDs=comp159542_c0_seq1.path1;transcripts=comp159542_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139347778	139349160	.	+	.	ID=comp159542_c0_seq1.mrna1;geneID=comp159542_c0_seq1.path1;Name=comp159542_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=1354;mismatches=15;indels=16;unknowns=0;Target=comp159542_c0_seq1 1371 1 .;CDS_Target=comp159542_c0_seq1 882 646 .;locus=RLOC_00011737
Chr1	stalkie_big_nohaplotig	exon	139347778	139349160	97	+	.	Parent=comp159542_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139348421	139348670	.	+	0	Parent=comp159542_c0_seq1.mrna1
Chr1	gffcl	locus	139349524	139350365	.	+	.	ID=RLOC_00011738;geneIDs=ORF2551.path1;transcripts=ORF2551.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139349524	139350365	.	+	.	ID=ORF2551.mrna1;geneID=ORF2551.path1;Name=ORF2551;Dir=indeterminatecoverage=100.0;identity=99.3;matches=837;mismatches=5;indels=1;unknowns=0;Target=ORF2551 843 1 .;CDS_Target=ORF2551 170 3 .;locus=RLOC_00011738
Chr1	stalkie_big_nohaplotig	exon	139349524	139350365	99	+	.	Parent=ORF2551.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139349526	139349692	.	+	0	Parent=ORF2551.mrna1
Chr1	gffcl	locus	139535314	139536190	.	+	.	ID=RLOC_00011739;geneIDs=comp134828_c1_seq1.path1;transcripts=comp134828_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139535314	139536190	.	+	.	ID=comp134828_c1_seq1.mrna1;geneID=comp134828_c1_seq1.path1;Name=comp134828_c1_seq1;Dir=antisensecoverage=99.9;identity=100.0;matches=736;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011739
Chr1	stalkie_big_nohaplotig	exon	139535314	139535387	100	+	.	Parent=comp134828_c1_seq1.mrna1;Target=comp134828_c1_seq1 664 737 -
Chr1	stalkie_big_nohaplotig	exon	139535469	139535688	100	+	.	Parent=comp134828_c1_seq1.mrna1;Target=comp134828_c1_seq1 444 663 -
Chr1	stalkie_big_nohaplotig	exon	139535749	139536190	100	+	.	Parent=comp134828_c1_seq1.mrna1;Target=comp134828_c1_seq1 2 443 -
Chr1	stalkie_big_nohaplotig	CDS	139535315	139535387	.	+	0	Parent=comp134828_c1_seq1.mrna1;Target=comp134828_c1_seq1 664 736 .
Chr1	stalkie_big_nohaplotig	CDS	139535469	139535644	.	+	2	Parent=comp134828_c1_seq1.mrna1;Target=comp134828_c1_seq1 488 663 .
Chr1	gffcl	locus	139538334	139539393	.	+	.	ID=RLOC_00011740;geneIDs=comp152196_c0_seq1.path1;transcripts=comp152196_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139538334	139539393	.	+	.	ID=comp152196_c0_seq1.mrna1;geneID=comp152196_c0_seq1.path1;Name=comp152196_c0_seq1;Dir=sensecoverage=99.9;identity=99.2;matches=997;mismatches=7;indels=1;unknowns=0;locus=RLOC_00011740
Chr1	stalkie_big_nohaplotig	exon	139538334	139538478	100	+	.	Parent=comp152196_c0_seq1.mrna1;Target=comp152196_c0_seq1 2 146 +
Chr1	stalkie_big_nohaplotig	exon	139538535	139539393	99	+	.	Parent=comp152196_c0_seq1.mrna1;Target=comp152196_c0_seq1 147 1006 +
Chr1	stalkie_big_nohaplotig	CDS	139538434	139538478	.	+	0	Parent=comp152196_c0_seq1.mrna1;Target=comp152196_c0_seq1 102 146 +
Chr1	stalkie_big_nohaplotig	CDS	139538535	139538795	.	+	0	Parent=comp152196_c0_seq1.mrna1;Target=comp152196_c0_seq1 147 407 +
Chr1	gffcl	locus	139539751	139543730	.	+	.	ID=RLOC_00011741;geneIDs=comp159025_c1_seq1.path1;transcripts=comp159025_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139539751	139543730	.	+	.	ID=comp159025_c1_seq1.mrna1;geneID=comp159025_c1_seq1.path1;Name=comp159025_c1_seq1;Dir=sensecoverage=98.2;identity=97.7;matches=796;mismatches=14;indels=5;unknowns=0;locus=RLOC_00011741
Chr1	stalkie_big_nohaplotig	exon	139539751	139539916	100	+	.	Parent=comp159025_c1_seq1.mrna1;Target=comp159025_c1_seq1 1 166 +
Chr1	stalkie_big_nohaplotig	exon	139540622	139540818	98	+	.	Parent=comp159025_c1_seq1.mrna1;Target=comp159025_c1_seq1 167 363 +
Chr1	stalkie_big_nohaplotig	exon	139542238	139542420	100	+	.	Parent=comp159025_c1_seq1.mrna1;Target=comp159025_c1_seq1 364 546 +
Chr1	stalkie_big_nohaplotig	exon	139542487	139542536	82	+	.	Parent=comp159025_c1_seq1.mrna1;Target=comp159025_c1_seq1 547 591 +
Chr1	stalkie_big_nohaplotig	exon	139542568	139542628	100	+	.	Parent=comp159025_c1_seq1.mrna1;Target=comp159025_c1_seq1 608 668 +
Chr1	stalkie_big_nohaplotig	exon	139543573	139543730	94	+	.	Parent=comp159025_c1_seq1.mrna1;Target=comp159025_c1_seq1 669 826 +
Chr1	stalkie_big_nohaplotig	CDS	139539752	139539916	.	+	0	Parent=comp159025_c1_seq1.mrna1;Target=comp159025_c1_seq1 2 166 +
Chr1	stalkie_big_nohaplotig	CDS	139540622	139540771	.	+	0	Parent=comp159025_c1_seq1.mrna1;Target=comp159025_c1_seq1 167 316 +
Chr1	gffcl	locus	139587196	139667784	.	+	.	ID=RLOC_00011742;geneIDs=FBgn0030090.2.path1,comp156976_c0_seq1.path1;transcripts=comp156976_c0_seq1.mrna1,FBgn0030090.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139587196	139667784	.	+	.	ID=comp156976_c0_seq1.mrna1;geneID=comp156976_c0_seq1.path1;Name=comp156976_c0_seq1;Dir=sensecoverage=68.3;identity=99.8;matches=1183;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011742
Chr1	stalkie_big_nohaplotig	exon	139587196	139587203	100	+	.	Parent=comp156976_c0_seq1.mrna1;Target=comp156976_c0_seq1 524 531 +
Chr1	stalkie_big_nohaplotig	exon	139590413	139590421	100	+	.	Parent=comp156976_c0_seq1.mrna1;Target=comp156976_c0_seq1 532 540 +
Chr1	stalkie_big_nohaplotig	exon	139590428	139590436	100	+	.	Parent=comp156976_c0_seq1.mrna1;Target=comp156976_c0_seq1 574 582 +
Chr1	stalkie_big_nohaplotig	exon	139595584	139595588	100	+	.	Parent=comp156976_c0_seq1.mrna1;Target=comp156976_c0_seq1 607 611 +
Chr1	stalkie_big_nohaplotig	exon	139601615	139601619	100	+	.	Parent=comp156976_c0_seq1.mrna1;Target=comp156976_c0_seq1 612 616 +
Chr1	stalkie_big_nohaplotig	exon	139606370	139606373	100	+	.	Parent=comp156976_c0_seq1.mrna1;Target=comp156976_c0_seq1 625 628 +
Chr1	stalkie_big_nohaplotig	exon	139621805	139621808	100	+	.	Parent=comp156976_c0_seq1.mrna1;Target=comp156976_c0_seq1 629 632 +
Chr1	stalkie_big_nohaplotig	exon	139637744	139637791	100	+	.	Parent=comp156976_c0_seq1.mrna1;Target=comp156976_c0_seq1 633 680 +
Chr1	stalkie_big_nohaplotig	exon	139659269	139659325	100	+	.	Parent=comp156976_c0_seq1.mrna1;Target=comp156976_c0_seq1 681 737 +
Chr1	stalkie_big_nohaplotig	exon	139665216	139665467	100	+	.	Parent=comp156976_c0_seq1.mrna1;Target=comp156976_c0_seq1 738 989 +
Chr1	stalkie_big_nohaplotig	exon	139667002	139667784	99	+	.	Parent=comp156976_c0_seq1.mrna1;Target=comp156976_c0_seq1 990 1772 +
Chr1	stalkie_big_nohaplotig	CDS	139587196	139587203	.	+	0	Parent=comp156976_c0_seq1.mrna1;Target=comp156976_c0_seq1 524 531 +
Chr1	stalkie_big_nohaplotig	CDS	139590413	139590421	.	+	1	Parent=comp156976_c0_seq1.mrna1;Target=comp156976_c0_seq1 532 540 +
Chr1	stalkie_big_nohaplotig	CDS	139590428	139590436	.	+	1	Parent=comp156976_c0_seq1.mrna1;Target=comp156976_c0_seq1 574 582 +
Chr1	stalkie_big_nohaplotig	CDS	139595584	139595588	.	+	1	Parent=comp156976_c0_seq1.mrna1;Target=comp156976_c0_seq1 607 611 +
Chr1	stalkie_big_nohaplotig	CDS	139601615	139601619	.	+	2	Parent=comp156976_c0_seq1.mrna1;Target=comp156976_c0_seq1 612 616 +
Chr1	stalkie_big_nohaplotig	CDS	139606370	139606373	.	+	0	Parent=comp156976_c0_seq1.mrna1;Target=comp156976_c0_seq1 625 628 +
Chr1	stalkie_big_nohaplotig	CDS	139621805	139621808	.	+	2	Parent=comp156976_c0_seq1.mrna1;Target=comp156976_c0_seq1 629 632 +
Chr1	stalkie_big_nohaplotig	CDS	139637744	139637791	.	+	1	Parent=comp156976_c0_seq1.mrna1;Target=comp156976_c0_seq1 633 680 +
Chr1	stalkie_big_nohaplotig	CDS	139659269	139659288	.	+	1	Parent=comp156976_c0_seq1.mrna1;Target=comp156976_c0_seq1 681 700 +
Chr1	stalkie_big_nohaplotig	mRNA	139592574	139667673	.	+	.	ID=FBgn0030090.2.mrna1;geneID=FBgn0030090.2.path1;Name=FBgn0030090.2;Dir=sensecoverage=100.0;identity=99.8;matches=1102;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011742
Chr1	stalkie_big_nohaplotig	exon	139592574	139592705	100	+	.	Parent=FBgn0030090.2.mrna1;Target=FBgn0030090.2 1 132 +
Chr1	stalkie_big_nohaplotig	exon	139637744	139637791	100	+	.	Parent=FBgn0030090.2.mrna1;Target=FBgn0030090.2 133 180 +
Chr1	stalkie_big_nohaplotig	exon	139665216	139665467	100	+	.	Parent=FBgn0030090.2.mrna1;Target=FBgn0030090.2 181 432 +
Chr1	stalkie_big_nohaplotig	exon	139667002	139667673	99	+	.	Parent=FBgn0030090.2.mrna1;Target=FBgn0030090.2 433 1104 +
Chr1	stalkie_big_nohaplotig	CDS	139592574	139592705	.	+	0	Parent=FBgn0030090.2.mrna1;Target=FBgn0030090.2 1 132 +
Chr1	stalkie_big_nohaplotig	CDS	139637744	139637791	.	+	0	Parent=FBgn0030090.2.mrna1;Target=FBgn0030090.2 133 180 +
Chr1	stalkie_big_nohaplotig	CDS	139665216	139665467	.	+	0	Parent=FBgn0030090.2.mrna1;Target=FBgn0030090.2 181 432 +
Chr1	stalkie_big_nohaplotig	CDS	139667002	139667673	.	+	0	Parent=FBgn0030090.2.mrna1;Target=FBgn0030090.2 433 1104 +
Chr1	gffcl	locus	139670721	139671370	.	-	.	ID=RLOC_00011743;geneIDs=comp150132_c0_seq1.path1;transcripts=comp150132_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139670721	139671370	.	-	.	ID=comp150132_c0_seq1.mrna1;geneID=comp150132_c0_seq1.path1;Name=comp150132_c0_seq1;Dir=indeterminatecoverage=96.7;identity=99.2;matches=646;mismatches=4;indels=1;unknowns=0;Target=comp150132_c0_seq1 666 16 .;CDS_Target=comp150132_c0_seq1 402 310 .;locus=RLOC_00011743
Chr1	stalkie_big_nohaplotig	exon	139670721	139671370	99	-	.	Parent=comp150132_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139670985	139671077	.	-	0	Parent=comp150132_c0_seq1.mrna1
Chr1	gffcl	locus	139694286	139697700	.	+	.	ID=RLOC_00011744;geneIDs=FBgn0037996.1.path1,comp155566_c0_seq1.path1;transcripts=comp155566_c0_seq1.mrna1,FBgn0037996.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139694286	139695881	.	+	.	ID=comp155566_c0_seq1.mrna1;geneID=comp155566_c0_seq1.path1;Name=comp155566_c0_seq1;Dir=antisensecoverage=100.0;identity=90.7;matches=933;mismatches=65;indels=31;unknowns=0;Target=comp155566_c0_seq1 923 1009 .;locus=RLOC_00011744
Chr1	stalkie_big_nohaplotig	exon	139694286	139695278	90	+	.	Parent=comp155566_c0_seq1.mrna1;Target=comp155566_c0_seq1 24 1011 -
Chr1	stalkie_big_nohaplotig	exon	139695859	139695881	100	+	.	Parent=comp155566_c0_seq1.mrna1;Target=comp155566_c0_seq1 1 23 -
Chr1	stalkie_big_nohaplotig	CDS	139694288	139694374	.	+	0	Parent=comp155566_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139695820	139697700	.	+	.	ID=FBgn0037996.1.mrna1;geneID=FBgn0037996.1.path1;Name=FBgn0037996.1;Dir=sensecoverage=100.0;identity=99.7;matches=1711;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011744
Chr1	stalkie_big_nohaplotig	exon	139695820	139696231	100	+	.	Parent=FBgn0037996.1.mrna1;Target=FBgn0037996.1 1 412 +
Chr1	stalkie_big_nohaplotig	exon	139696298	139697286	99	+	.	Parent=FBgn0037996.1.mrna1;Target=FBgn0037996.1 413 1401 +
Chr1	stalkie_big_nohaplotig	exon	139697386	139697700	99	+	.	Parent=FBgn0037996.1.mrna1;Target=FBgn0037996.1 1402 1716 +
Chr1	stalkie_big_nohaplotig	CDS	139695820	139696231	.	+	0	Parent=FBgn0037996.1.mrna1;Target=FBgn0037996.1 1 412 +
Chr1	stalkie_big_nohaplotig	CDS	139696298	139697286	.	+	2	Parent=FBgn0037996.1.mrna1;Target=FBgn0037996.1 413 1401 +
Chr1	stalkie_big_nohaplotig	CDS	139697386	139697700	.	+	0	Parent=FBgn0037996.1.mrna1;Target=FBgn0037996.1 1402 1716 +
Chr1	gffcl	locus	139702842	139704557	.	+	.	ID=RLOC_00011745;geneIDs=FBgn0034552.1.path1;transcripts=FBgn0034552.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139702842	139704557	.	+	.	ID=FBgn0034552.1.mrna1;geneID=FBgn0034552.1.path1;Name=FBgn0034552.1;Dir=sensecoverage=100.0;identity=98.7;matches=1641;mismatches=21;indels=0;unknowns=0;locus=RLOC_00011745
Chr1	stalkie_big_nohaplotig	exon	139702842	139704200	98	+	.	Parent=FBgn0034552.1.mrna1;Target=FBgn0034552.1 1 1359 +
Chr1	stalkie_big_nohaplotig	exon	139704255	139704557	99	+	.	Parent=FBgn0034552.1.mrna1;Target=FBgn0034552.1 1360 1662 +
Chr1	stalkie_big_nohaplotig	CDS	139702842	139704200	.	+	0	Parent=FBgn0034552.1.mrna1;Target=FBgn0034552.1 1 1359 +
Chr1	stalkie_big_nohaplotig	CDS	139704255	139704557	.	+	0	Parent=FBgn0034552.1.mrna1;Target=FBgn0034552.1 1360 1662 +
Chr1	gffcl	locus	139771267	139772112	.	+	.	ID=RLOC_00011746;geneIDs=FBgn0027066.5.path1;transcripts=FBgn0027066.5.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139771267	139772112	.	+	.	ID=FBgn0027066.5.mrna1;geneID=FBgn0027066.5.path1;Name=FBgn0027066.5;Dir=indeterminatecoverage=100.0;identity=99.2;matches=839;mismatches=7;indels=0;unknowns=0;Target=FBgn0027066.5 846 1 .;locus=RLOC_00011746
Chr1	stalkie_big_nohaplotig	exon	139771267	139772112	99	+	.	Parent=FBgn0027066.5.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139771267	139772112	.	+	0	Parent=FBgn0027066.5.mrna1
Chr1	gffcl	locus	139868495	139869018	.	-	.	ID=RLOC_00011747;geneIDs=comp118994_c0_seq1.path1;transcripts=comp118994_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139868495	139869018	.	-	.	ID=comp118994_c0_seq1.mrna1;geneID=comp118994_c0_seq1.path1;Name=comp118994_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=523;mismatches=1;indels=0;unknowns=0;Target=comp118994_c0_seq1 524 1 .;CDS_Target=comp118994_c0_seq1 506 384 .;locus=RLOC_00011747
Chr1	stalkie_big_nohaplotig	exon	139868495	139869018	99	-	.	Parent=comp118994_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139868513	139868635	.	-	0	Parent=comp118994_c0_seq1.mrna1
Chr1	gffcl	locus	139869233	139872077	.	-	.	ID=RLOC_00011748;geneIDs=FBgn0033451.1.path1;transcripts=FBgn0033451.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139869233	139872077	.	-	.	ID=FBgn0033451.1.mrna1;geneID=FBgn0033451.1.path1;Name=FBgn0033451.1;Dir=sensecoverage=99.8;identity=99.2;matches=1004;mismatches=8;indels=0;unknowns=0;locus=RLOC_00011748
Chr1	stalkie_big_nohaplotig	exon	139869233	139869354	99	-	.	Parent=FBgn0033451.1.mrna1;Target=FBgn0033451.1 891 1012 +
Chr1	stalkie_big_nohaplotig	exon	139869410	139869714	98	-	.	Parent=FBgn0033451.1.mrna1;Target=FBgn0033451.1 586 890 +
Chr1	stalkie_big_nohaplotig	exon	139871493	139872077	99	-	.	Parent=FBgn0033451.1.mrna1;Target=FBgn0033451.1 1 585 +
Chr1	stalkie_big_nohaplotig	CDS	139869234	139869354	.	-	1	Parent=FBgn0033451.1.mrna1;Target=FBgn0033451.1 891 1011 +
Chr1	stalkie_big_nohaplotig	CDS	139869410	139869714	.	-	0	Parent=FBgn0033451.1.mrna1;Target=FBgn0033451.1 586 890 +
Chr1	stalkie_big_nohaplotig	CDS	139871493	139872077	.	-	0	Parent=FBgn0033451.1.mrna1;Target=FBgn0033451.1 1 585 +
Chr1	gffcl	locus	139876297	139878498	.	+	.	ID=RLOC_00011749;geneIDs=FBgn0033451.2.path1;transcripts=FBgn0033451.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139876297	139878498	.	+	.	ID=FBgn0033451.2.mrna1;geneID=FBgn0033451.2.path1;Name=FBgn0033451.2;Dir=sensecoverage=100.0;identity=99.2;matches=1030;mismatches=8;indels=0;unknowns=0;locus=RLOC_00011749
Chr1	stalkie_big_nohaplotig	exon	139876297	139876312	93	+	.	Parent=FBgn0033451.2.mrna1;Target=FBgn0033451.2 1 16 +
Chr1	stalkie_big_nohaplotig	exon	139876384	139877000	99	+	.	Parent=FBgn0033451.2.mrna1;Target=FBgn0033451.2 17 633 +
Chr1	stalkie_big_nohaplotig	exon	139878037	139878323	100	+	.	Parent=FBgn0033451.2.mrna1;Target=FBgn0033451.2 634 920 +
Chr1	stalkie_big_nohaplotig	exon	139878381	139878498	97	+	.	Parent=FBgn0033451.2.mrna1;Target=FBgn0033451.2 921 1038 +
Chr1	stalkie_big_nohaplotig	CDS	139876297	139876312	.	+	0	Parent=FBgn0033451.2.mrna1;Target=FBgn0033451.2 1 16 +
Chr1	stalkie_big_nohaplotig	CDS	139876384	139877000	.	+	2	Parent=FBgn0033451.2.mrna1;Target=FBgn0033451.2 17 633 +
Chr1	stalkie_big_nohaplotig	CDS	139878037	139878323	.	+	0	Parent=FBgn0033451.2.mrna1;Target=FBgn0033451.2 634 920 +
Chr1	stalkie_big_nohaplotig	CDS	139878381	139878498	.	+	1	Parent=FBgn0033451.2.mrna1;Target=FBgn0033451.2 921 1038 +
Chr1	gffcl	locus	139883340	139883581	.	-	.	ID=RLOC_00011751;geneIDs=comp147245_c0_seq1.path1;transcripts=comp147245_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139883340	139883581	.	-	.	ID=comp147245_c0_seq1.mrna1;geneID=comp147245_c0_seq1.path1;Name=comp147245_c0_seq1;Dir=indeterminatecoverage=94.9;identity=97.9;matches=238;mismatches=4;indels=1;unknowns=0;Target=comp147245_c0_seq1 252 10 .;CDS_Target=comp147245_c0_seq1 130 11 .;locus=RLOC_00011751
Chr1	stalkie_big_nohaplotig	exon	139883340	139883581	97	-	.	Parent=comp147245_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139883462	139883580	.	-	0	Parent=comp147245_c0_seq1.mrna1
Chr1	gffcl	locus	139884087	139888024	.	-	.	ID=RLOC_00011752;geneIDs=FBgn0033452.1.path1;transcripts=FBgn0033452.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139884087	139888024	.	-	.	ID=FBgn0033452.1.mrna1;geneID=FBgn0033452.1.path1;Name=FBgn0033452.1;Dir=sensecoverage=100.0;identity=99.1;matches=660;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011752
Chr1	stalkie_big_nohaplotig	exon	139884087	139884242	100	-	.	Parent=FBgn0033452.1.mrna1;Target=FBgn0033452.1 511 666 +
Chr1	stalkie_big_nohaplotig	exon	139885911	139885978	98	-	.	Parent=FBgn0033452.1.mrna1;Target=FBgn0033452.1 443 510 +
Chr1	stalkie_big_nohaplotig	exon	139887512	139887740	98	-	.	Parent=FBgn0033452.1.mrna1;Target=FBgn0033452.1 214 442 +
Chr1	stalkie_big_nohaplotig	exon	139887812	139888024	99	-	.	Parent=FBgn0033452.1.mrna1;Target=FBgn0033452.1 1 213 +
Chr1	stalkie_big_nohaplotig	CDS	139884087	139884242	.	-	0	Parent=FBgn0033452.1.mrna1;Target=FBgn0033452.1 511 666 +
Chr1	stalkie_big_nohaplotig	CDS	139885911	139885978	.	-	2	Parent=FBgn0033452.1.mrna1;Target=FBgn0033452.1 443 510 +
Chr1	stalkie_big_nohaplotig	CDS	139887512	139887740	.	-	0	Parent=FBgn0033452.1.mrna1;Target=FBgn0033452.1 214 442 +
Chr1	stalkie_big_nohaplotig	CDS	139887812	139888024	.	-	0	Parent=FBgn0033452.1.mrna1;Target=FBgn0033452.1 1 213 +
Chr1	gffcl	locus	139890178	139892211	.	+	.	ID=RLOC_00011753;geneIDs=FBgn0010356.2.path1;transcripts=FBgn0010356.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139890178	139892211	.	+	.	ID=FBgn0010356.2.mrna1;geneID=FBgn0010356.2.path1;Name=FBgn0010356.2;Dir=indeterminatecoverage=100.0;identity=98.9;matches=2012;mismatches=22;indels=0;unknowns=0;Target=FBgn0010356.2 2034 1 .;locus=RLOC_00011753
Chr1	stalkie_big_nohaplotig	exon	139890178	139892211	98	+	.	Parent=FBgn0010356.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139890178	139892211	.	+	0	Parent=FBgn0010356.2.mrna1
Chr1	gffcl	locus	139892373	139893301	.	-	.	ID=RLOC_00011754;geneIDs=FBgn0033566.1.path1;transcripts=FBgn0033566.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139892373	139893301	.	-	.	ID=FBgn0033566.1.mrna1;geneID=FBgn0033566.1.path1;Name=FBgn0033566.1;Dir=sensecoverage=100.0;identity=99.5;matches=737;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011754
Chr1	stalkie_big_nohaplotig	exon	139892373	139892454	100	-	.	Parent=FBgn0033566.1.mrna1;Target=FBgn0033566.1 660 741 +
Chr1	stalkie_big_nohaplotig	exon	139892521	139892790	100	-	.	Parent=FBgn0033566.1.mrna1;Target=FBgn0033566.1 390 659 +
Chr1	stalkie_big_nohaplotig	exon	139892847	139893022	98	-	.	Parent=FBgn0033566.1.mrna1;Target=FBgn0033566.1 214 389 +
Chr1	stalkie_big_nohaplotig	exon	139893089	139893301	99	-	.	Parent=FBgn0033566.1.mrna1;Target=FBgn0033566.1 1 213 +
Chr1	stalkie_big_nohaplotig	CDS	139892373	139892454	.	-	1	Parent=FBgn0033566.1.mrna1;Target=FBgn0033566.1 660 741 +
Chr1	stalkie_big_nohaplotig	CDS	139892521	139892790	.	-	1	Parent=FBgn0033566.1.mrna1;Target=FBgn0033566.1 390 659 +
Chr1	stalkie_big_nohaplotig	CDS	139892847	139893022	.	-	0	Parent=FBgn0033566.1.mrna1;Target=FBgn0033566.1 214 389 +
Chr1	stalkie_big_nohaplotig	CDS	139893089	139893301	.	-	0	Parent=FBgn0033566.1.mrna1;Target=FBgn0033566.1 1 213 +
Chr1	gffcl	locus	139894150	139897234	.	-	.	ID=RLOC_00011755;geneIDs=FBgn0033887.1.path1;transcripts=FBgn0033887.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139894150	139897234	.	-	.	ID=FBgn0033887.1.mrna1;geneID=FBgn0033887.1.path1;Name=FBgn0033887.1;Dir=sensecoverage=100.0;identity=99.0;matches=950;mismatches=10;indels=0;unknowns=0;locus=RLOC_00011755
Chr1	stalkie_big_nohaplotig	exon	139894150	139894520	98	-	.	Parent=FBgn0033887.1.mrna1;Target=FBgn0033887.1 590 960 +
Chr1	stalkie_big_nohaplotig	exon	139894581	139894707	100	-	.	Parent=FBgn0033887.1.mrna1;Target=FBgn0033887.1 463 589 +
Chr1	stalkie_big_nohaplotig	exon	139894774	139894978	98	-	.	Parent=FBgn0033887.1.mrna1;Target=FBgn0033887.1 258 462 +
Chr1	stalkie_big_nohaplotig	exon	139895047	139895281	100	-	.	Parent=FBgn0033887.1.mrna1;Target=FBgn0033887.1 23 257 +
Chr1	stalkie_big_nohaplotig	exon	139897213	139897234	100	-	.	Parent=FBgn0033887.1.mrna1;Target=FBgn0033887.1 1 22 +
Chr1	stalkie_big_nohaplotig	CDS	139894150	139894520	.	-	2	Parent=FBgn0033887.1.mrna1;Target=FBgn0033887.1 590 960 +
Chr1	stalkie_big_nohaplotig	CDS	139894581	139894707	.	-	0	Parent=FBgn0033887.1.mrna1;Target=FBgn0033887.1 463 589 +
Chr1	stalkie_big_nohaplotig	CDS	139894774	139894978	.	-	1	Parent=FBgn0033887.1.mrna1;Target=FBgn0033887.1 258 462 +
Chr1	stalkie_big_nohaplotig	CDS	139895047	139895281	.	-	2	Parent=FBgn0033887.1.mrna1;Target=FBgn0033887.1 23 257 +
Chr1	stalkie_big_nohaplotig	CDS	139897213	139897234	.	-	0	Parent=FBgn0033887.1.mrna1;Target=FBgn0033887.1 1 22 +
Chr1	gffcl	locus	139897735	139900890	.	-	.	ID=RLOC_00011756;geneIDs=FBgn0260817.1.path1;transcripts=FBgn0260817.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139897735	139900890	.	-	.	ID=FBgn0260817.1.mrna1;geneID=FBgn0260817.1.path1;Name=FBgn0260817.1;Dir=sensecoverage=100.0;identity=99.0;matches=1945;mismatches=20;indels=0;unknowns=0;locus=RLOC_00011756
Chr1	stalkie_big_nohaplotig	exon	139897735	139897860	97	-	.	Parent=FBgn0260817.1.mrna1;Target=FBgn0260817.1 1840 1965 +
Chr1	stalkie_big_nohaplotig	exon	139897931	139898522	98	-	.	Parent=FBgn0260817.1.mrna1;Target=FBgn0260817.1 1248 1839 +
Chr1	stalkie_big_nohaplotig	exon	139899338	139899727	99	-	.	Parent=FBgn0260817.1.mrna1;Target=FBgn0260817.1 858 1247 +
Chr1	stalkie_big_nohaplotig	exon	139899787	139899889	99	-	.	Parent=FBgn0260817.1.mrna1;Target=FBgn0260817.1 755 857 +
Chr1	stalkie_big_nohaplotig	exon	139899953	139900232	99	-	.	Parent=FBgn0260817.1.mrna1;Target=FBgn0260817.1 475 754 +
Chr1	stalkie_big_nohaplotig	exon	139900286	139900497	99	-	.	Parent=FBgn0260817.1.mrna1;Target=FBgn0260817.1 263 474 +
Chr1	stalkie_big_nohaplotig	exon	139900553	139900642	98	-	.	Parent=FBgn0260817.1.mrna1;Target=FBgn0260817.1 173 262 +
Chr1	stalkie_big_nohaplotig	exon	139900719	139900890	97	-	.	Parent=FBgn0260817.1.mrna1;Target=FBgn0260817.1 1 172 +
Chr1	stalkie_big_nohaplotig	CDS	139897735	139897860	.	-	0	Parent=FBgn0260817.1.mrna1;Target=FBgn0260817.1 1840 1965 +
Chr1	stalkie_big_nohaplotig	CDS	139897931	139898522	.	-	1	Parent=FBgn0260817.1.mrna1;Target=FBgn0260817.1 1248 1839 +
Chr1	stalkie_big_nohaplotig	CDS	139899338	139899727	.	-	1	Parent=FBgn0260817.1.mrna1;Target=FBgn0260817.1 858 1247 +
Chr1	stalkie_big_nohaplotig	CDS	139899787	139899889	.	-	2	Parent=FBgn0260817.1.mrna1;Target=FBgn0260817.1 755 857 +
Chr1	stalkie_big_nohaplotig	CDS	139899953	139900232	.	-	0	Parent=FBgn0260817.1.mrna1;Target=FBgn0260817.1 475 754 +
Chr1	stalkie_big_nohaplotig	CDS	139900286	139900497	.	-	2	Parent=FBgn0260817.1.mrna1;Target=FBgn0260817.1 263 474 +
Chr1	stalkie_big_nohaplotig	CDS	139900553	139900642	.	-	2	Parent=FBgn0260817.1.mrna1;Target=FBgn0260817.1 173 262 +
Chr1	stalkie_big_nohaplotig	CDS	139900719	139900890	.	-	0	Parent=FBgn0260817.1.mrna1;Target=FBgn0260817.1 1 172 +
Chr1	gffcl	locus	139903064	139918888	.	+	.	ID=RLOC_00011757;geneIDs=FBgn0035228.1.path1;transcripts=FBgn0035228.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139903064	139918888	.	+	.	ID=FBgn0035228.1.mrna1;geneID=FBgn0035228.1.path1;Name=FBgn0035228.1;Dir=sensecoverage=100.0;identity=99.9;matches=926;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011757
Chr1	stalkie_big_nohaplotig	exon	139903064	139903307	99	+	.	Parent=FBgn0035228.1.mrna1;Target=FBgn0035228.1 1 244 +
Chr1	stalkie_big_nohaplotig	exon	139914241	139914420	100	+	.	Parent=FBgn0035228.1.mrna1;Target=FBgn0035228.1 245 424 +
Chr1	stalkie_big_nohaplotig	exon	139915286	139915602	100	+	.	Parent=FBgn0035228.1.mrna1;Target=FBgn0035228.1 425 741 +
Chr1	stalkie_big_nohaplotig	exon	139915671	139915809	100	+	.	Parent=FBgn0035228.1.mrna1;Target=FBgn0035228.1 742 880 +
Chr1	stalkie_big_nohaplotig	exon	139918842	139918888	100	+	.	Parent=FBgn0035228.1.mrna1;Target=FBgn0035228.1 881 927 +
Chr1	stalkie_big_nohaplotig	CDS	139903064	139903307	.	+	0	Parent=FBgn0035228.1.mrna1;Target=FBgn0035228.1 1 244 +
Chr1	stalkie_big_nohaplotig	CDS	139914241	139914420	.	+	2	Parent=FBgn0035228.1.mrna1;Target=FBgn0035228.1 245 424 +
Chr1	stalkie_big_nohaplotig	CDS	139915286	139915602	.	+	2	Parent=FBgn0035228.1.mrna1;Target=FBgn0035228.1 425 741 +
Chr1	stalkie_big_nohaplotig	CDS	139915671	139915809	.	+	0	Parent=FBgn0035228.1.mrna1;Target=FBgn0035228.1 742 880 +
Chr1	stalkie_big_nohaplotig	CDS	139918842	139918888	.	+	2	Parent=FBgn0035228.1.mrna1;Target=FBgn0035228.1 881 927 +
Chr1	gffcl	locus	139917163	139918466	.	+	.	ID=RLOC_00011758;geneIDs=comp158942_c0_seq1.path1;transcripts=comp158942_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139917163	139918466	.	+	.	ID=comp158942_c0_seq1.mrna1;geneID=comp158942_c0_seq1.path1;Name=comp158942_c0_seq1;Dir=indeterminatecoverage=98.9;identity=93.7;matches=1014;mismatches=45;indels=23;unknowns=0;Target=comp158942_c0_seq1 694 608 .;locus=RLOC_00011758
Chr1	stalkie_big_nohaplotig	exon	139917163	139917359	87	+	.	Parent=comp158942_c0_seq1.mrna1;Target=comp158942_c0_seq1 212 1 .
Chr1	stalkie_big_nohaplotig	exon	139917603	139918466	95	+	.	Parent=comp158942_c0_seq1.mrna1;Target=comp158942_c0_seq1 1080 213 .
Chr1	stalkie_big_nohaplotig	CDS	139917998	139918083	.	+	0	Parent=comp158942_c0_seq1.mrna1
Chr1	gffcl	locus	139920067	139924390	.	-	.	ID=RLOC_00011759;geneIDs=FBgn0038438.1.path1;transcripts=FBgn0038438.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139920067	139924390	.	-	.	ID=FBgn0038438.1.mrna1;geneID=FBgn0038438.1.path1;Name=FBgn0038438.1;Dir=sensecoverage=99.5;identity=97.3;matches=616;mismatches=5;indels=12;unknowns=0;locus=RLOC_00011759
Chr1	stalkie_big_nohaplotig	exon	139920067	139920295	93	-	.	Parent=FBgn0038438.1.mrna1;Target=FBgn0038438.1 408 624 +
Chr1	stalkie_big_nohaplotig	exon	139920408	139920571	100	-	.	Parent=FBgn0038438.1.mrna1;Target=FBgn0038438.1 244 407 +
Chr1	stalkie_big_nohaplotig	exon	139924151	139924390	99	-	.	Parent=FBgn0038438.1.mrna1;Target=FBgn0038438.1 4 243 +
Chr1	stalkie_big_nohaplotig	CDS	139920067	139920295	.	-	1	Parent=FBgn0038438.1.mrna1;Target=FBgn0038438.1 408 624 +
Chr1	stalkie_big_nohaplotig	CDS	139920408	139920571	.	-	0	Parent=FBgn0038438.1.mrna1;Target=FBgn0038438.1 244 407 +
Chr1	stalkie_big_nohaplotig	CDS	139924151	139924390	.	-	0	Parent=FBgn0038438.1.mrna1;Target=FBgn0038438.1 4 243 +
Chr1	gffcl	locus	139926654	139926969	.	.	.	ID=RLOC_00011760;geneIDs=comp118956_c1_seq1.path1,comp118956_c1_seq1.path2;transcripts=comp118956_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	139926654	139926969	.	-	.	ID=comp118956_c1_seq1.mrna2;geneID=comp118956_c1_seq1.path2;Name=comp118956_c1_seq1;Dir=indeterminatecoverage=86.6;identity=97.5;matches=310;mismatches=6;indels=2;unknowns=0;Target=comp118956_c1_seq1 365 48 .;CDS_Target=comp118956_c1_seq1 297 268 .;locus=RLOC_00011760
Chr1	stalkie_big_nohaplotig	exon	139926654	139926969	97	-	.	Parent=comp118956_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	139926722	139926749	.	-	0	Parent=comp118956_c1_seq1.mrna2
Chr1	gffcl	locus	139928990	139929421	.	-	.	ID=RLOC_00011761;geneIDs=comp1068635_c0_seq1.path1;transcripts=comp1068635_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139928990	139929421	.	-	.	ID=comp1068635_c0_seq1.mrna1;geneID=comp1068635_c0_seq1.path1;Name=comp1068635_c0_seq1;Dir=indeterminatecoverage=83.9;identity=99.1;matches=428;mismatches=0;indels=4;unknowns=0;Target=comp1068635_c0_seq1 454 27 .;CDS_Target=comp1068635_c0_seq1 452 366 .;locus=RLOC_00011761
Chr1	stalkie_big_nohaplotig	exon	139928990	139929421	99	-	.	Parent=comp1068635_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139928992	139929078	.	-	0	Parent=comp1068635_c0_seq1.mrna1
Chr1	gffcl	locus	139932873	139933270	.	+	.	ID=RLOC_00011762;geneIDs=comp75181_c0_seq1.path1;transcripts=comp75181_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139932873	139933270	.	+	.	ID=comp75181_c0_seq1.mrna1;geneID=comp75181_c0_seq1.path1;Name=comp75181_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=396;mismatches=2;indels=1;unknowns=0;Target=comp75181_c0_seq1 399 1 .;CDS_Target=comp75181_c0_seq1 93 28 .;locus=RLOC_00011762
Chr1	stalkie_big_nohaplotig	exon	139932873	139933270	99	+	.	Parent=comp75181_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139932900	139932965	.	+	0	Parent=comp75181_c0_seq1.mrna1
Chr1	gffcl	locus	139937658	139938155	.	+	.	ID=RLOC_00011764;geneIDs=comp1146985_c0_seq1.path1;transcripts=comp1146985_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139937658	139938155	.	+	.	ID=comp1146985_c0_seq1.mrna1;geneID=comp1146985_c0_seq1.path1;Name=comp1146985_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=496;mismatches=2;indels=0;unknowns=0;Target=comp1146985_c0_seq1 498 1 .;CDS_Target=comp1146985_c0_seq1 58 2 .;locus=RLOC_00011764
Chr1	stalkie_big_nohaplotig	exon	139937658	139938155	99	+	.	Parent=comp1146985_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139937659	139937715	.	+	0	Parent=comp1146985_c0_seq1.mrna1
Chr1	gffcl	locus	139938258	139938567	.	+	.	ID=RLOC_00011765;geneIDs=comp66369_c0_seq1.path1;transcripts=comp66369_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139938258	139938567	.	+	.	ID=comp66369_c0_seq1.mrna1;geneID=comp66369_c0_seq1.path1;Name=comp66369_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=307;mismatches=3;indels=0;unknowns=0;Target=comp66369_c0_seq1 310 1 .;CDS_Target=comp66369_c0_seq1 181 86 .;locus=RLOC_00011765
Chr1	stalkie_big_nohaplotig	exon	139938258	139938567	99	+	.	Parent=comp66369_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139938343	139938438	.	+	0	Parent=comp66369_c0_seq1.mrna1
Chr1	gffcl	locus	139943376	139943727	.	-	.	ID=RLOC_00011766;geneIDs=comp143322_c0_seq1.path1;transcripts=comp143322_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139943376	139943727	.	-	.	ID=comp143322_c0_seq1.mrna1;geneID=comp143322_c0_seq1.path1;Name=comp143322_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=347;mismatches=1;indels=6;unknowns=0;Target=comp143322_c0_seq1 350 1 .;CDS_Target=comp143322_c0_seq1 84 1 .;locus=RLOC_00011766
Chr1	stalkie_big_nohaplotig	exon	139943376	139943727	98	-	.	Parent=comp143322_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139943644	139943727	.	-	0	Parent=comp143322_c0_seq1.mrna1
Chr1	gffcl	locus	139948580	139948903	.	-	.	ID=RLOC_00011767;geneIDs=comp110603_c0_seq1.path1;transcripts=comp110603_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139948580	139948903	.	-	.	ID=comp110603_c0_seq1.mrna1;geneID=comp110603_c0_seq1.path1;Name=comp110603_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=322;mismatches=1;indels=2;unknowns=0;Target=comp110603_c0_seq1 324 1 .;CDS_Target=comp110603_c0_seq1 35 3 .;locus=RLOC_00011767
Chr1	stalkie_big_nohaplotig	exon	139948580	139948903	99	-	.	Parent=comp110603_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139948870	139948901	.	-	0	Parent=comp110603_c0_seq1.mrna1
Chr1	gffcl	locus	139949124	139949403	.	+	.	ID=RLOC_00011768;geneIDs=comp117494_c0_seq1.path1;transcripts=comp117494_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139949124	139949403	.	+	.	ID=comp117494_c0_seq1.mrna1;geneID=comp117494_c0_seq1.path1;Name=comp117494_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=278;mismatches=2;indels=0;unknowns=0;Target=comp117494_c0_seq1 280 1 .;CDS_Target=comp117494_c0_seq1 280 200 .;locus=RLOC_00011768
Chr1	stalkie_big_nohaplotig	exon	139949124	139949403	99	+	.	Parent=comp117494_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139949323	139949403	.	+	0	Parent=comp117494_c0_seq1.mrna1
Chr1	gffcl	locus	139949464	139949938	.	-	.	ID=RLOC_00011769;geneIDs=comp495450_c0_seq1.path1;transcripts=comp495450_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139949464	139949938	.	-	.	ID=comp495450_c0_seq1.mrna1;geneID=comp495450_c0_seq1.path1;Name=comp495450_c0_seq1;Dir=indeterminatecoverage=98.4;identity=100.0;matches=407;mismatches=0;indels=0;unknowns=0;Target=comp495450_c0_seq1 193 104 .;locus=RLOC_00011769
Chr1	stalkie_big_nohaplotig	exon	139949464	139949649	100	-	.	Parent=comp495450_c0_seq1.mrna1;Target=comp495450_c0_seq1 432 247 .
Chr1	stalkie_big_nohaplotig	exon	139949718	139949938	100	-	.	Parent=comp495450_c0_seq1.mrna1;Target=comp495450_c0_seq1 227 7 .
Chr1	stalkie_big_nohaplotig	CDS	139949752	139949841	.	-	0	Parent=comp495450_c0_seq1.mrna1
Chr1	gffcl	locus	139950079	139950354	.	+	.	ID=RLOC_00011770;geneIDs=comp117174_c0_seq1.path1;transcripts=comp117174_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139950079	139950354	.	+	.	ID=comp117174_c0_seq1.mrna1;geneID=comp117174_c0_seq1.path1;Name=comp117174_c0_seq1;Dir=indeterminatecoverage=98.2;identity=100.0;matches=276;mismatches=0;indels=0;unknowns=0;Target=comp117174_c0_seq1 281 6 .;CDS_Target=comp117174_c0_seq1 219 121 .;locus=RLOC_00011770
Chr1	stalkie_big_nohaplotig	exon	139950079	139950354	100	+	.	Parent=comp117174_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139950194	139950292	.	+	0	Parent=comp117174_c0_seq1.mrna1
Chr1	gffcl	locus	139950551	140662112	.	.	.	ID=RLOC_00011771;geneIDs=comp158580_c0_seq1.path1,comp162177_c0_seq1.path1;transcripts=comp162177_c0_seq1.mrna1,comp158580_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139950551	140662112	.	+	.	ID=comp162177_c0_seq1.mrna1;geneID=comp162177_c0_seq1.path1;Name=comp162177_c0_seq1;Dir=indeterminatecoverage=85.4;identity=97.5;matches=1554;mismatches=32;indels=8;unknowns=0;Target=comp162177_c0_seq1 1290 1240 .;locus=RLOC_00011771
Chr1	stalkie_big_nohaplotig	exon	139950551	139952088	97	+	.	Parent=comp162177_c0_seq1.mrna1;Target=comp162177_c0_seq1 1587 46 .
Chr1	stalkie_big_nohaplotig	exon	139960864	139960872	100	+	.	Parent=comp162177_c0_seq1.mrna1;Target=comp162177_c0_seq1 1596 1588 .
Chr1	stalkie_big_nohaplotig	exon	139967943	139967947	100	+	.	Parent=comp162177_c0_seq1.mrna1;Target=comp162177_c0_seq1 1601 1597 .
Chr1	stalkie_big_nohaplotig	exon	139976062	139976071	100	+	.	Parent=comp162177_c0_seq1.mrna1;Target=comp162177_c0_seq1 1611 1602 .
Chr1	stalkie_big_nohaplotig	exon	139986721	139986724	50	+	.	Parent=comp162177_c0_seq1.mrna1;Target=comp162177_c0_seq1 1653 1652 .
Chr1	stalkie_big_nohaplotig	exon	140548437	140548445	100	+	.	Parent=comp162177_c0_seq1.mrna1;Target=comp162177_c0_seq1 1666 1658 .
Chr1	stalkie_big_nohaplotig	exon	140662100	140662112	100	+	.	Parent=comp162177_c0_seq1.mrna1;Target=comp162177_c0_seq1 1699 1687 .
Chr1	stalkie_big_nohaplotig	CDS	139951742	139951791	.	+	0	Parent=comp162177_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139960770	139962706	.	-	.	ID=comp158580_c0_seq1.mrna1;geneID=comp158580_c0_seq1.path1;Name=comp158580_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1922;mismatches=12;indels=3;unknowns=0;Target=comp158580_c0_seq1 1934 1 .;CDS_Target=comp158580_c0_seq1 417 280 .;locus=RLOC_00011771
Chr1	stalkie_big_nohaplotig	exon	139960770	139962706	99	-	.	Parent=comp158580_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139962290	139962427	.	-	0	Parent=comp158580_c0_seq1.mrna1
Chr1	gffcl	locus	139952851	139953588	.	+	.	ID=RLOC_00011772;geneIDs=comp158769_c0_seq1.path1;transcripts=comp158769_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139952851	139953588	.	+	.	ID=comp158769_c0_seq1.mrna1;geneID=comp158769_c0_seq1.path1;Name=comp158769_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=730;mismatches=8;indels=1;unknowns=0;Target=comp158769_c0_seq1 739 1 .;CDS_Target=comp158769_c0_seq1 653 471 .;locus=RLOC_00011772
Chr1	stalkie_big_nohaplotig	exon	139952851	139953588	98	+	.	Parent=comp158769_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139953320	139953502	.	+	0	Parent=comp158769_c0_seq1.mrna1
Chr1	gffcl	locus	139954969	139955299	.	-	.	ID=RLOC_00011773;geneIDs=comp1450848_c0_seq1.path1;transcripts=comp1450848_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139954969	139955299	.	-	.	ID=comp1450848_c0_seq1.mrna1;geneID=comp1450848_c0_seq1.path1;Name=comp1450848_c0_seq1;Dir=indeterminatecoverage=92.5;identity=100.0;matches=331;mismatches=0;indels=0;unknowns=0;Target=comp1450848_c0_seq1 356 26 .;CDS_Target=comp1450848_c0_seq1 134 27 .;locus=RLOC_00011773
Chr1	stalkie_big_nohaplotig	exon	139954969	139955299	100	-	.	Parent=comp1450848_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139955191	139955298	.	-	0	Parent=comp1450848_c0_seq1.mrna1
Chr1	gffcl	locus	139955389	139955775	.	-	.	ID=RLOC_00011774;geneIDs=comp1699370_c0_seq1.path1;transcripts=comp1699370_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139955389	139955775	.	-	.	ID=comp1699370_c0_seq1.mrna1;geneID=comp1699370_c0_seq1.path1;Name=comp1699370_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.7;matches=386;mismatches=1;indels=0;unknowns=0;Target=comp1699370_c0_seq1 389 3 .;CDS_Target=comp1699370_c0_seq1 51 4 .;locus=RLOC_00011774
Chr1	stalkie_big_nohaplotig	exon	139955389	139955775	99	-	.	Parent=comp1699370_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139955727	139955774	.	-	0	Parent=comp1699370_c0_seq1.mrna1
Chr1	gffcl	locus	139956041	139956304	.	+	.	ID=RLOC_00011775;geneIDs=comp1047332_c0_seq1.path1;transcripts=comp1047332_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139956041	139956304	.	+	.	ID=comp1047332_c0_seq1.mrna1;geneID=comp1047332_c0_seq1.path1;Name=comp1047332_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=263;mismatches=1;indels=0;unknowns=0;Target=comp1047332_c0_seq1 264 1 .;CDS_Target=comp1047332_c0_seq1 127 2 .;locus=RLOC_00011775
Chr1	stalkie_big_nohaplotig	exon	139956041	139956304	99	+	.	Parent=comp1047332_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139956042	139956167	.	+	0	Parent=comp1047332_c0_seq1.mrna1
Chr1	gffcl	locus	139956828	139957033	.	+	.	ID=RLOC_00011776;geneIDs=comp133976_c0_seq1.path1;transcripts=comp133976_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139956828	139957033	.	+	.	ID=comp133976_c0_seq1.mrna1;geneID=comp133976_c0_seq1.path1;Name=comp133976_c0_seq1;Dir=indeterminatecoverage=100.0;identity=89.3;matches=184;mismatches=22;indels=0;unknowns=0;Target=comp133976_c0_seq1 206 1 .;CDS_Target=comp133976_c0_seq1 39 1 .;locus=RLOC_00011776
Chr1	stalkie_big_nohaplotig	exon	139956828	139957033	89	+	.	Parent=comp133976_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139956828	139956866	.	+	0	Parent=comp133976_c0_seq1.mrna1
Chr1	gffcl	locus	139983459	139983880	.	+	.	ID=RLOC_00011777;geneIDs=comp106633_c0_seq1.path1;transcripts=comp106633_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	139983459	139983880	.	+	.	ID=comp106633_c0_seq1.mrna1;geneID=comp106633_c0_seq1.path1;Name=comp106633_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=421;mismatches=1;indels=0;unknowns=0;Target=comp106633_c0_seq1 422 1 .;CDS_Target=comp106633_c0_seq1 421 251 .;locus=RLOC_00011777
Chr1	stalkie_big_nohaplotig	exon	139983459	139983880	99	+	.	Parent=comp106633_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	139983709	139983879	.	+	0	Parent=comp106633_c0_seq1.mrna1
Chr1	gffcl	locus	140048374	140049081	.	-	.	ID=RLOC_00011778;geneIDs=comp158561_c0_seq1.path1;transcripts=comp158561_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140048374	140049081	.	-	.	ID=comp158561_c0_seq1.mrna1;geneID=comp158561_c0_seq1.path1;Name=comp158561_c0_seq1;Dir=indeterminatecoverage=68.4;identity=92.6;matches=674;mismatches=34;indels=20;unknowns=0;Target=comp158561_c0_seq1 728 1 .;CDS_Target=comp158561_c0_seq1 510 430 .;locus=RLOC_00011778
Chr1	stalkie_big_nohaplotig	exon	140048374	140049081	92	-	.	Parent=comp158561_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	140048592	140048659	.	-	0	Parent=comp158561_c0_seq1.mrna1
Chr1	gffcl	locus	140049229	140049294	.	+	.	ID=RLOC_00011779;geneIDs=FBgn0262738.1.path2;transcripts=FBgn0262738.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	140049229	140049294	.	+	.	ID=FBgn0262738.1.mrna2;geneID=FBgn0262738.1.path2;Name=FBgn0262738.1;Dir=indeterminatecoverage=2.0;identity=100.0;matches=66;mismatches=0;indels=0;unknowns=0;Target=FBgn0262738.1 3288 3223 .;locus=RLOC_00011779
Chr1	stalkie_big_nohaplotig	exon	140049229	140049294	100	+	.	Parent=FBgn0262738.1.mrna2
Chr1	gffcl	locus	140049491	140051795	.	+	.	ID=RLOC_00011780;geneIDs=comp157613_c0_seq1.path1;transcripts=comp157613_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140049491	140051795	.	+	.	ID=comp157613_c0_seq1.mrna1;geneID=comp157613_c0_seq1.path1;Name=comp157613_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=2275;mismatches=29;indels=6;unknowns=0;Target=comp157613_c0_seq1 2309 1 .;CDS_Target=comp157613_c0_seq1 2272 2126 .;locus=RLOC_00011780
Chr1	stalkie_big_nohaplotig	exon	140049491	140051795	98	+	.	Parent=comp157613_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	140051612	140051758	.	+	0	Parent=comp157613_c0_seq1.mrna1
Chr1	gffcl	locus	140052141	140054370	.	-	.	ID=RLOC_00011781;geneIDs=comp88849_c0_seq1.path1,comp141207_c0_seq1.path1,comp160178_c0_seq1.path1;transcripts=comp160178_c0_seq1.mrna1,comp88849_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140052141	140054366	.	-	.	ID=comp160178_c0_seq1.mrna1;geneID=comp160178_c0_seq1.path1;Name=comp160178_c0_seq1;Dir=indeterminatecoverage=99.4;identity=85.6;matches=1042;mismatches=68;indels=107;unknowns=0;locus=RLOC_00011781
Chr1	stalkie_big_nohaplotig	exon	140052141	140052524	94	-	.	Parent=comp160178_c0_seq1.mrna1;Target=comp160178_c0_seq1 1215 832 .
Chr1	stalkie_big_nohaplotig	exon	140053517	140053850	85	-	.	Parent=comp160178_c0_seq1.mrna1;Target=comp160178_c0_seq1 830 474 .
Chr1	stalkie_big_nohaplotig	exon	140053972	140054366	78	-	.	Parent=comp160178_c0_seq1.mrna1;Target=comp160178_c0_seq1 473 1 .
Chr1	stalkie_big_nohaplotig	CDS	140053750	140053850	.	-	1	Parent=comp160178_c0_seq1.mrna1;Target=comp160178_c0_seq1 576 474 .
Chr1	stalkie_big_nohaplotig	CDS	140053972	140053976	.	-	0	Parent=comp160178_c0_seq1.mrna1;Target=comp160178_c0_seq1 473 469 .
Chr1	stalkie_big_nohaplotig	mRNA	140053805	140054051	.	-	.	ID=comp88849_c0_seq1.mrna1;geneID=comp88849_c0_seq1.path1;Name=comp88849_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=243;mismatches=4;indels=0;unknowns=0;Target=comp88849_c0_seq1 247 1 .;CDS_Target=comp88849_c0_seq1 61 2 .;locus=RLOC_00011781
Chr1	stalkie_big_nohaplotig	exon	140053805	140054051	98	-	.	Parent=comp88849_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	140053991	140054050	.	-	0	Parent=comp88849_c0_seq1.mrna1
Chr1	gffcl	locus	140065658	140068657	.	+	.	ID=RLOC_00011782;geneIDs=FBgn0030189.1.path1;transcripts=FBgn0030189.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140065658	140068657	.	+	.	ID=FBgn0030189.1.mrna1;geneID=FBgn0030189.1.path1;Name=FBgn0030189.1;Dir=sensecoverage=100.0;identity=99.2;matches=1491;mismatches=12;indels=0;unknowns=0;locus=RLOC_00011782
Chr1	stalkie_big_nohaplotig	exon	140065658	140065837	99	+	.	Parent=FBgn0030189.1.mrna1;Target=FBgn0030189.1 1 180 +
Chr1	stalkie_big_nohaplotig	exon	140065909	140066053	95	+	.	Parent=FBgn0030189.1.mrna1;Target=FBgn0030189.1 181 325 +
Chr1	stalkie_big_nohaplotig	exon	140067289	140067503	99	+	.	Parent=FBgn0030189.1.mrna1;Target=FBgn0030189.1 326 540 +
Chr1	stalkie_big_nohaplotig	exon	140067571	140068278	99	+	.	Parent=FBgn0030189.1.mrna1;Target=FBgn0030189.1 541 1248 +
Chr1	stalkie_big_nohaplotig	exon	140068341	140068421	100	+	.	Parent=FBgn0030189.1.mrna1;Target=FBgn0030189.1 1249 1329 +
Chr1	stalkie_big_nohaplotig	exon	140068484	140068657	100	+	.	Parent=FBgn0030189.1.mrna1;Target=FBgn0030189.1 1330 1503 +
Chr1	stalkie_big_nohaplotig	CDS	140065658	140065837	.	+	0	Parent=FBgn0030189.1.mrna1;Target=FBgn0030189.1 1 180 +
Chr1	stalkie_big_nohaplotig	CDS	140065909	140066053	.	+	0	Parent=FBgn0030189.1.mrna1;Target=FBgn0030189.1 181 325 +
Chr1	stalkie_big_nohaplotig	CDS	140067289	140067503	.	+	2	Parent=FBgn0030189.1.mrna1;Target=FBgn0030189.1 326 540 +
Chr1	stalkie_big_nohaplotig	CDS	140067571	140068278	.	+	0	Parent=FBgn0030189.1.mrna1;Target=FBgn0030189.1 541 1248 +
Chr1	stalkie_big_nohaplotig	CDS	140068341	140068421	.	+	0	Parent=FBgn0030189.1.mrna1;Target=FBgn0030189.1 1249 1329 +
Chr1	stalkie_big_nohaplotig	CDS	140068484	140068657	.	+	0	Parent=FBgn0030189.1.mrna1;Target=FBgn0030189.1 1330 1503 +
Chr1	gffcl	locus	140070305	140070751	.	-	.	ID=RLOC_00011783;geneIDs=comp147184_c0_seq1.path1;transcripts=comp147184_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140070305	140070751	.	-	.	ID=comp147184_c0_seq1.mrna1;geneID=comp147184_c0_seq1.path1;Name=comp147184_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=443;mismatches=4;indels=0;unknowns=0;Target=comp147184_c0_seq1 447 1 .;CDS_Target=comp147184_c0_seq1 90 1 .;locus=RLOC_00011783
Chr1	stalkie_big_nohaplotig	exon	140070305	140070751	99	-	.	Parent=comp147184_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	140070662	140070751	.	-	0	Parent=comp147184_c0_seq1.mrna1
Chr1	gffcl	locus	140143623	140147369	.	-	.	ID=RLOC_00011784;geneIDs=comp149436_c0_seq1.path1;transcripts=comp149436_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140143623	140147369	.	-	.	ID=comp149436_c0_seq1.mrna1;geneID=comp149436_c0_seq1.path1;Name=comp149436_c0_seq1;Dir=sensecoverage=99.9;identity=97.8;matches=1235;mismatches=2;indels=26;unknowns=0;locus=RLOC_00011784
Chr1	stalkie_big_nohaplotig	exon	140143623	140144445	96	-	.	Parent=comp149436_c0_seq1.mrna1;Target=comp149436_c0_seq1 428 1251 +
Chr1	stalkie_big_nohaplotig	exon	140144680	140144989	99	-	.	Parent=comp149436_c0_seq1.mrna1;Target=comp149436_c0_seq1 118 427 +
Chr1	stalkie_big_nohaplotig	exon	140147253	140147369	99	-	.	Parent=comp149436_c0_seq1.mrna1;Target=comp149436_c0_seq1 2 117 +
Chr1	stalkie_big_nohaplotig	CDS	140144971	140144989	.	-	1	Parent=comp149436_c0_seq1.mrna1;Target=comp149436_c0_seq1 118 136 +
Chr1	stalkie_big_nohaplotig	CDS	140147253	140147329	.	-	0	Parent=comp149436_c0_seq1.mrna1;Target=comp149436_c0_seq1 41 117 +
Chr1	gffcl	locus	140147400	140240588	.	-	.	ID=RLOC_00011785;geneIDs=comp138727_c0_seq1.path1;transcripts=comp138727_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140147400	140240588	.	-	.	ID=comp138727_c0_seq1.mrna1;geneID=comp138727_c0_seq1.path1;Name=comp138727_c0_seq1;Dir=antisensecoverage=95.6;identity=98.2;matches=387;mismatches=7;indels=0;unknowns=0;Target=comp138727_c0_seq1 89 247 .;locus=RLOC_00011785
Chr1	stalkie_big_nohaplotig	exon	140147400	140147644	98	-	.	Parent=comp138727_c0_seq1.mrna1;Target=comp138727_c0_seq1 3 247 -
Chr1	stalkie_big_nohaplotig	exon	140240440	140240588	97	-	.	Parent=comp138727_c0_seq1.mrna1;Target=comp138727_c0_seq1 248 396 -
Chr1	stalkie_big_nohaplotig	CDS	140147486	140147644	.	-	0	Parent=comp138727_c0_seq1.mrna1
Chr1	gffcl	locus	140210685	140211664	.	.	.	ID=RLOC_00011786;geneIDs=comp58511_c0_seq1.path1,comp231031_c0_seq1.path1;transcripts=comp58511_c0_seq1.mrna1,comp231031_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140210685	140211664	.	-	.	ID=comp58511_c0_seq1.mrna1;geneID=comp58511_c0_seq1.path1;Name=comp58511_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=468;mismatches=2;indels=0;unknowns=0;Target=comp58511_c0_seq1 3 200 +;locus=RLOC_00011786
Chr1	stalkie_big_nohaplotig	exon	140210685	140210798	99	-	.	Parent=comp58511_c0_seq1.mrna1;Target=comp58511_c0_seq1 357 470 +
Chr1	stalkie_big_nohaplotig	exon	140211309	140211664	99	-	.	Parent=comp58511_c0_seq1.mrna1;Target=comp58511_c0_seq1 1 356 +
Chr1	stalkie_big_nohaplotig	CDS	140211465	140211662	.	-	0	Parent=comp58511_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140210751	140210984	.	+	.	ID=comp231031_c0_seq1.mrna1;geneID=comp231031_c0_seq1.path1;Name=comp231031_c0_seq1;Dir=indeterminatecoverage=100.0;identity=82.9;matches=194;mismatches=7;indels=33;unknowns=0;Target=comp231031_c0_seq1 201 1 .;CDS_Target=comp231031_c0_seq1 70 2 .;locus=RLOC_00011786
Chr1	stalkie_big_nohaplotig	exon	140210751	140210984	82	+	.	Parent=comp231031_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	140210752	140210820	.	+	0	Parent=comp231031_c0_seq1.mrna1
Chr1	gffcl	locus	140215473	140215982	.	+	.	ID=RLOC_00011787;geneIDs=comp63709_c0_seq1.path1;transcripts=comp63709_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140215473	140215982	.	+	.	ID=comp63709_c0_seq1.mrna1;geneID=comp63709_c0_seq1.path1;Name=comp63709_c0_seq1;Dir=indeterminatecoverage=99.3;identity=93.3;matches=503;mismatches=7;indels=29;unknowns=0;Target=comp63709_c0_seq1 539 1 .;CDS_Target=comp63709_c0_seq1 111 1 .;locus=RLOC_00011787
Chr1	stalkie_big_nohaplotig	exon	140215473	140215982	93	+	.	Parent=comp63709_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	140215473	140215583	.	+	0	Parent=comp63709_c0_seq1.mrna1
Chr1	gffcl	locus	140270617	140271102	.	+	.	ID=RLOC_00011789;geneIDs=comp150408_c0_seq1.path1;transcripts=comp150408_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140270617	140271102	.	+	.	ID=comp150408_c0_seq1.mrna1;geneID=comp150408_c0_seq1.path1;Name=comp150408_c0_seq1;Dir=indeterminatecoverage=95.3;identity=96.1;matches=471;mismatches=15;indels=4;unknowns=0;Target=comp150408_c0_seq1 490 1 .;CDS_Target=comp150408_c0_seq1 365 210 .;locus=RLOC_00011789
Chr1	stalkie_big_nohaplotig	exon	140270617	140271102	96	+	.	Parent=comp150408_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	140270822	140270977	.	+	0	Parent=comp150408_c0_seq1.mrna1
Chr1	gffcl	locus	140281327	140281703	.	+	.	ID=RLOC_00011790;geneIDs=comp258786_c0_seq1.path1;transcripts=comp258786_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140281327	140281703	.	+	.	ID=comp258786_c0_seq1.mrna1;geneID=comp258786_c0_seq1.path1;Name=comp258786_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=375;mismatches=2;indels=0;unknowns=0;Target=comp258786_c0_seq1 377 1 .;CDS_Target=comp258786_c0_seq1 109 2 .;locus=RLOC_00011790
Chr1	stalkie_big_nohaplotig	exon	140281327	140281703	99	+	.	Parent=comp258786_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	140281328	140281435	.	+	0	Parent=comp258786_c0_seq1.mrna1
Chr1	gffcl	locus	140283483	140283868	.	+	.	ID=RLOC_00011791;geneIDs=comp148857_c0_seq1.path1;transcripts=comp148857_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140283483	140283868	.	+	.	ID=comp148857_c0_seq1.mrna1;geneID=comp148857_c0_seq1.path1;Name=comp148857_c0_seq1;Dir=indeterminatecoverage=95.5;identity=99.5;matches=384;mismatches=2;indels=0;unknowns=0;Target=comp148857_c0_seq1 403 18 .;CDS_Target=comp148857_c0_seq1 264 163 .;locus=RLOC_00011791
Chr1	stalkie_big_nohaplotig	exon	140283483	140283868	99	+	.	Parent=comp148857_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	140283628	140283729	.	+	0	Parent=comp148857_c0_seq1.mrna1
Chr1	gffcl	locus	140285205	140285451	.	+	.	ID=RLOC_00011792;geneIDs=comp61476_c0_seq1.path1;transcripts=comp61476_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140285205	140285451	.	+	.	ID=comp61476_c0_seq1.mrna1;geneID=comp61476_c0_seq1.path1;Name=comp61476_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.2;matches=245;mismatches=2;indels=0;unknowns=0;Target=comp61476_c0_seq1 248 2 .;CDS_Target=comp61476_c0_seq1 59 3 .;locus=RLOC_00011792
Chr1	stalkie_big_nohaplotig	exon	140285205	140285451	99	+	.	Parent=comp61476_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	140285206	140285262	.	+	0	Parent=comp61476_c0_seq1.mrna1
Chr1	gffcl	locus	140285705	140285743	.	+	.	ID=RLOC_00011793;geneIDs=comp74007_c0_seq1.path2;transcripts=comp74007_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	140285705	140285743	.	+	.	ID=comp74007_c0_seq1.mrna2;geneID=comp74007_c0_seq1.path2;Name=comp74007_c0_seq1;Dir=indeterminatecoverage=10.2;identity=97.4;matches=38;mismatches=1;indels=0;unknowns=0;Target=comp74007_c0_seq1 384 346 .;locus=RLOC_00011793
Chr1	stalkie_big_nohaplotig	exon	140285705	140285743	97	+	.	Parent=comp74007_c0_seq1.mrna2
Chr1	gffcl	locus	140293349	140295911	.	-	.	ID=RLOC_00011794;geneIDs=comp161633_c1_seq1.path1;transcripts=comp161633_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140293349	140295911	.	-	.	ID=comp161633_c1_seq1.mrna1;geneID=comp161633_c1_seq1.path1;Name=comp161633_c1_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=2330;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011794
Chr1	stalkie_big_nohaplotig	exon	140293349	140294147	99	-	.	Parent=comp161633_c1_seq1.mrna1;Target=comp161633_c1_seq1 1 799 -
Chr1	stalkie_big_nohaplotig	exon	140294233	140295372	99	-	.	Parent=comp161633_c1_seq1.mrna1;Target=comp161633_c1_seq1 800 1939 -
Chr1	stalkie_big_nohaplotig	exon	140295447	140295699	99	-	.	Parent=comp161633_c1_seq1.mrna1;Target=comp161633_c1_seq1 1940 2192 -
Chr1	stalkie_big_nohaplotig	exon	140295771	140295911	100	-	.	Parent=comp161633_c1_seq1.mrna1;Target=comp161633_c1_seq1 2193 2333 -
Chr1	stalkie_big_nohaplotig	CDS	140293986	140294147	.	-	0	Parent=comp161633_c1_seq1.mrna1;Target=comp161633_c1_seq1 638 799 .
Chr1	stalkie_big_nohaplotig	CDS	140294233	140295372	.	-	0	Parent=comp161633_c1_seq1.mrna1;Target=comp161633_c1_seq1 800 1939 .
Chr1	stalkie_big_nohaplotig	CDS	140295447	140295699	.	-	1	Parent=comp161633_c1_seq1.mrna1;Target=comp161633_c1_seq1 1940 2192 .
Chr1	stalkie_big_nohaplotig	CDS	140295771	140295910	.	-	0	Parent=comp161633_c1_seq1.mrna1;Target=comp161633_c1_seq1 2193 2332 .
Chr1	gffcl	locus	140470680	140471009	.	+	.	ID=RLOC_00011795;geneIDs=comp128902_c0_seq1.path1;transcripts=comp128902_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140470680	140471009	.	+	.	ID=comp128902_c0_seq1.mrna1;geneID=comp128902_c0_seq1.path1;Name=comp128902_c0_seq1;Dir=indeterminatecoverage=85.7;identity=99.7;matches=329;mismatches=1;indels=0;unknowns=0;Target=comp128902_c0_seq1 379 50 .;CDS_Target=comp128902_c0_seq1 142 50 .;locus=RLOC_00011795
Chr1	stalkie_big_nohaplotig	exon	140470680	140471009	99	+	.	Parent=comp128902_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	140470680	140470772	.	+	0	Parent=comp128902_c0_seq1.mrna1
Chr1	gffcl	locus	140549380	140555932	.	-	.	ID=RLOC_00011797;geneIDs=comp156021_c0_seq1.path1;transcripts=comp156021_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140549380	140555932	.	-	.	ID=comp156021_c0_seq1.mrna1;geneID=comp156021_c0_seq1.path1;Name=comp156021_c0_seq1;Dir=sensecoverage=98.5;identity=98.7;matches=938;mismatches=11;indels=1;unknowns=0;locus=RLOC_00011797
Chr1	stalkie_big_nohaplotig	exon	140549380	140549564	96	-	.	Parent=comp156021_c0_seq1.mrna1;Target=comp156021_c0_seq1 777 961 +
Chr1	stalkie_big_nohaplotig	exon	140549938	140550082	97	-	.	Parent=comp156021_c0_seq1.mrna1;Target=comp156021_c0_seq1 633 776 +
Chr1	stalkie_big_nohaplotig	exon	140550157	140550419	100	-	.	Parent=comp156021_c0_seq1.mrna1;Target=comp156021_c0_seq1 370 632 +
Chr1	stalkie_big_nohaplotig	exon	140550722	140550853	100	-	.	Parent=comp156021_c0_seq1.mrna1;Target=comp156021_c0_seq1 238 369 +
Chr1	stalkie_big_nohaplotig	exon	140555708	140555932	99	-	.	Parent=comp156021_c0_seq1.mrna1;Target=comp156021_c0_seq1 13 237 +
Chr1	stalkie_big_nohaplotig	CDS	140550158	140550419	.	-	1	Parent=comp156021_c0_seq1.mrna1;Target=comp156021_c0_seq1 370 631 +
Chr1	stalkie_big_nohaplotig	CDS	140550722	140550853	.	-	1	Parent=comp156021_c0_seq1.mrna1;Target=comp156021_c0_seq1 238 369 +
Chr1	stalkie_big_nohaplotig	CDS	140555708	140555814	.	-	0	Parent=comp156021_c0_seq1.mrna1;Target=comp156021_c0_seq1 131 237 +
Chr1	gffcl	locus	140599895	141342585	.	+	.	ID=RLOC_00011798;geneIDs=comp158702_c2_seq1.path1;transcripts=comp158702_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140599895	141342585	.	+	.	ID=comp158702_c2_seq1.mrna1;geneID=comp158702_c2_seq1.path1;Name=comp158702_c2_seq1;Dir=indeterminatecoverage=97.9;identity=88.4;matches=1091;mismatches=103;indels=40;unknowns=0;Target=comp158702_c2_seq1 140 33 .;locus=RLOC_00011798
Chr1	stalkie_big_nohaplotig	exon	140599895	140600096	90	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 232 31 .
Chr1	stalkie_big_nohaplotig	exon	140600143	140600183	85	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 281 242 .
Chr1	stalkie_big_nohaplotig	exon	140602685	140602689	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 286 282 .
Chr1	stalkie_big_nohaplotig	exon	140603192	140603198	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 293 287 .
Chr1	stalkie_big_nohaplotig	exon	140605786	140605789	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 297 294 .
Chr1	stalkie_big_nohaplotig	exon	140612624	140612677	71	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 352 298 .
Chr1	stalkie_big_nohaplotig	exon	140628050	140628065	62	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 366 357 .
Chr1	stalkie_big_nohaplotig	exon	140631510	140631574	52	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 434 367 .
Chr1	stalkie_big_nohaplotig	exon	140645286	140645288	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 470 468 .
Chr1	stalkie_big_nohaplotig	exon	140661385	140661392	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 478 471 .
Chr1	stalkie_big_nohaplotig	exon	140666038	140666042	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 483 479 .
Chr1	stalkie_big_nohaplotig	exon	140671417	140671418	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 485 484 .
Chr1	stalkie_big_nohaplotig	exon	140717738	140717741	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 489 486 .
Chr1	stalkie_big_nohaplotig	exon	140719680	140719689	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 499 490 .
Chr1	stalkie_big_nohaplotig	exon	140738773	140738778	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 505 500 .
Chr1	stalkie_big_nohaplotig	exon	140753939	140753942	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 509 506 .
Chr1	stalkie_big_nohaplotig	exon	140761664	140761665	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 511 510 .
Chr1	stalkie_big_nohaplotig	exon	140765205	140765225	57	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 523 512 .
Chr1	stalkie_big_nohaplotig	exon	140767193	140767203	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 534 524 .
Chr1	stalkie_big_nohaplotig	exon	140773657	140773659	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 537 535 .
Chr1	stalkie_big_nohaplotig	exon	140780140	140780143	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 541 538 .
Chr1	stalkie_big_nohaplotig	exon	140799834	140799845	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 553 542 .
Chr1	stalkie_big_nohaplotig	exon	140816819	140816825	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 560 554 .
Chr1	stalkie_big_nohaplotig	exon	140827771	140827776	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 566 561 .
Chr1	stalkie_big_nohaplotig	exon	140850650	140850653	75	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 570 567 .
Chr1	stalkie_big_nohaplotig	exon	140858689	140858704	87	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 586 571 .
Chr1	stalkie_big_nohaplotig	exon	140916704	140916709	83	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 592 587 .
Chr1	stalkie_big_nohaplotig	exon	140963014	140963017	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 596 593 .
Chr1	stalkie_big_nohaplotig	exon	140977181	140977189	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 605 597 .
Chr1	stalkie_big_nohaplotig	exon	140985175	140985183	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 614 606 .
Chr1	stalkie_big_nohaplotig	exon	141008608	141008643	57	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 659 615 .
Chr1	stalkie_big_nohaplotig	exon	141009521	141009523	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 662 660 .
Chr1	stalkie_big_nohaplotig	exon	141017340	141017348	77	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 671 663 .
Chr1	stalkie_big_nohaplotig	exon	141024577	141024588	91	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 683 672 .
Chr1	stalkie_big_nohaplotig	exon	141070968	141070978	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 694 684 .
Chr1	stalkie_big_nohaplotig	exon	141108321	141108326	83	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 735 730 .
Chr1	stalkie_big_nohaplotig	exon	141117260	141117309	56	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 780 736 .
Chr1	stalkie_big_nohaplotig	exon	141119402	141119408	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 787 781 .
Chr1	stalkie_big_nohaplotig	exon	141125276	141125280	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 792 788 .
Chr1	stalkie_big_nohaplotig	exon	141126097	141126102	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 798 793 .
Chr1	stalkie_big_nohaplotig	exon	141126318	141126327	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 808 799 .
Chr1	stalkie_big_nohaplotig	exon	141138920	141138922	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 811 809 .
Chr1	stalkie_big_nohaplotig	exon	141157776	141157785	90	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 821 812 .
Chr1	stalkie_big_nohaplotig	exon	141167968	141167978	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 918 908 .
Chr1	stalkie_big_nohaplotig	exon	141230659	141230661	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 923 921 .
Chr1	stalkie_big_nohaplotig	exon	141238292	141238294	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 926 924 .
Chr1	stalkie_big_nohaplotig	exon	141241679	141241682	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 930 927 .
Chr1	stalkie_big_nohaplotig	exon	141244107	141244114	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 938 931 .
Chr1	stalkie_big_nohaplotig	exon	141319563	141319566	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 942 939 .
Chr1	stalkie_big_nohaplotig	exon	141322314	141322329	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 958 943 .
Chr1	stalkie_big_nohaplotig	exon	141325577	141325587	100	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 969 959 .
Chr1	stalkie_big_nohaplotig	exon	141342152	141342585	99	+	.	Parent=comp158702_c2_seq1.mrna1;Target=comp158702_c2_seq1 1405 970 .
Chr1	stalkie_big_nohaplotig	CDS	140599897	140600004	.	+	0	Parent=comp158702_c2_seq1.mrna1
Chr1	gffcl	locus	140618949	140621269	.	+	.	ID=RLOC_00011799;geneIDs=comp155664_c1_seq1.path1;transcripts=comp155664_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140618949	140621269	.	+	.	ID=comp155664_c1_seq1.mrna1;geneID=comp155664_c1_seq1.path1;Name=comp155664_c1_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=2112;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011799
Chr1	stalkie_big_nohaplotig	exon	140618949	140619056	97	+	.	Parent=comp155664_c1_seq1.mrna1;Target=comp155664_c1_seq1 2 109 +
Chr1	stalkie_big_nohaplotig	exon	140619113	140620030	99	+	.	Parent=comp155664_c1_seq1.mrna1;Target=comp155664_c1_seq1 110 1027 +
Chr1	stalkie_big_nohaplotig	exon	140620079	140620654	99	+	.	Parent=comp155664_c1_seq1.mrna1;Target=comp155664_c1_seq1 1028 1603 +
Chr1	stalkie_big_nohaplotig	exon	140620704	140620974	100	+	.	Parent=comp155664_c1_seq1.mrna1;Target=comp155664_c1_seq1 1604 1874 +
Chr1	stalkie_big_nohaplotig	exon	140621026	140621269	100	+	.	Parent=comp155664_c1_seq1.mrna1;Target=comp155664_c1_seq1 1875 2118 +
Chr1	stalkie_big_nohaplotig	CDS	140618949	140619056	.	+	0	Parent=comp155664_c1_seq1.mrna1;Target=comp155664_c1_seq1 2 109 +
Chr1	stalkie_big_nohaplotig	CDS	140619113	140620030	.	+	0	Parent=comp155664_c1_seq1.mrna1;Target=comp155664_c1_seq1 110 1027 +
Chr1	stalkie_big_nohaplotig	CDS	140620079	140620654	.	+	0	Parent=comp155664_c1_seq1.mrna1;Target=comp155664_c1_seq1 1028 1603 +
Chr1	stalkie_big_nohaplotig	CDS	140620704	140620974	.	+	0	Parent=comp155664_c1_seq1.mrna1;Target=comp155664_c1_seq1 1604 1874 +
Chr1	stalkie_big_nohaplotig	CDS	140621026	140621267	.	+	2	Parent=comp155664_c1_seq1.mrna1;Target=comp155664_c1_seq1 1875 2116 +
Chr1	gffcl	locus	140624370	140625212	.	+	.	ID=RLOC_00011800;geneIDs=comp149686_c0_seq1.path1;transcripts=comp149686_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140624370	140625212	.	+	.	ID=comp149686_c0_seq1.mrna1;geneID=comp149686_c0_seq1.path1;Name=comp149686_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=843;mismatches=0;indels=0;unknowns=0;Target=comp149686_c0_seq1 845 3 .;CDS_Target=comp149686_c0_seq1 171 4 .;locus=RLOC_00011800
Chr1	stalkie_big_nohaplotig	exon	140624370	140625212	100	+	.	Parent=comp149686_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	140624371	140624538	.	+	0	Parent=comp149686_c0_seq1.mrna1
Chr1	gffcl	locus	140626166	140631732	.	-	.	ID=RLOC_00011801;geneIDs=FBgn0000299.2.path1;transcripts=FBgn0000299.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140626166	140631732	.	-	.	ID=FBgn0000299.2.mrna1;geneID=FBgn0000299.2.path1;Name=FBgn0000299.2;Dir=sensecoverage=100.0;identity=99.8;matches=4691;mismatches=10;indels=0;unknowns=0;locus=RLOC_00011801
Chr1	stalkie_big_nohaplotig	exon	140626166	140626312	100	-	.	Parent=FBgn0000299.2.mrna1;Target=FBgn0000299.2 4555 4701 +
Chr1	stalkie_big_nohaplotig	exon	140626393	140626486	100	-	.	Parent=FBgn0000299.2.mrna1;Target=FBgn0000299.2 4461 4554 +
Chr1	stalkie_big_nohaplotig	exon	140626558	140627695	99	-	.	Parent=FBgn0000299.2.mrna1;Target=FBgn0000299.2 3323 4460 +
Chr1	stalkie_big_nohaplotig	exon	140627757	140628090	100	-	.	Parent=FBgn0000299.2.mrna1;Target=FBgn0000299.2 2989 3322 +
Chr1	stalkie_big_nohaplotig	exon	140628208	140628747	99	-	.	Parent=FBgn0000299.2.mrna1;Target=FBgn0000299.2 2449 2988 +
Chr1	stalkie_big_nohaplotig	exon	140628967	140629766	100	-	.	Parent=FBgn0000299.2.mrna1;Target=FBgn0000299.2 1649 2448 +
Chr1	stalkie_big_nohaplotig	exon	140629824	140630247	100	-	.	Parent=FBgn0000299.2.mrna1;Target=FBgn0000299.2 1225 1648 +
Chr1	stalkie_big_nohaplotig	exon	140630304	140631187	99	-	.	Parent=FBgn0000299.2.mrna1;Target=FBgn0000299.2 341 1224 +
Chr1	stalkie_big_nohaplotig	exon	140631247	140631294	100	-	.	Parent=FBgn0000299.2.mrna1;Target=FBgn0000299.2 293 340 +
Chr1	stalkie_big_nohaplotig	exon	140631441	140631732	100	-	.	Parent=FBgn0000299.2.mrna1;Target=FBgn0000299.2 1 292 +
Chr1	stalkie_big_nohaplotig	CDS	140626166	140626312	.	-	0	Parent=FBgn0000299.2.mrna1;Target=FBgn0000299.2 4555 4701 +
Chr1	stalkie_big_nohaplotig	CDS	140626393	140626486	.	-	1	Parent=FBgn0000299.2.mrna1;Target=FBgn0000299.2 4461 4554 +
Chr1	stalkie_big_nohaplotig	CDS	140626558	140627695	.	-	2	Parent=FBgn0000299.2.mrna1;Target=FBgn0000299.2 3323 4460 +
Chr1	stalkie_big_nohaplotig	CDS	140627757	140628090	.	-	0	Parent=FBgn0000299.2.mrna1;Target=FBgn0000299.2 2989 3322 +
Chr1	stalkie_big_nohaplotig	CDS	140628208	140628747	.	-	0	Parent=FBgn0000299.2.mrna1;Target=FBgn0000299.2 2449 2988 +
Chr1	stalkie_big_nohaplotig	CDS	140628967	140629766	.	-	2	Parent=FBgn0000299.2.mrna1;Target=FBgn0000299.2 1649 2448 +
Chr1	stalkie_big_nohaplotig	CDS	140629824	140630247	.	-	0	Parent=FBgn0000299.2.mrna1;Target=FBgn0000299.2 1225 1648 +
Chr1	stalkie_big_nohaplotig	CDS	140630304	140631187	.	-	2	Parent=FBgn0000299.2.mrna1;Target=FBgn0000299.2 341 1224 +
Chr1	stalkie_big_nohaplotig	CDS	140631247	140631294	.	-	2	Parent=FBgn0000299.2.mrna1;Target=FBgn0000299.2 293 340 +
Chr1	stalkie_big_nohaplotig	CDS	140631441	140631732	.	-	0	Parent=FBgn0000299.2.mrna1;Target=FBgn0000299.2 1 292 +
Chr1	gffcl	locus	140648200	140652285	.	-	.	ID=RLOC_00011802;geneIDs=CPIJ006421.1.path1,comp160106_c1_seq1.path1;transcripts=comp160106_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140648200	140652285	.	-	.	ID=comp160106_c1_seq1.mrna1;geneID=comp160106_c1_seq1.path1;Name=comp160106_c1_seq1;Dir=sensecoverage=98.7;identity=97.6;matches=2070;mismatches=50;indels=0;unknowns=0;locus=RLOC_00011802
Chr1	stalkie_big_nohaplotig	exon	140648200	140648514	97	-	.	Parent=comp160106_c1_seq1.mrna1;Target=comp160106_c1_seq1 1834 2148 +
Chr1	stalkie_big_nohaplotig	exon	140648584	140648823	98	-	.	Parent=comp160106_c1_seq1.mrna1;Target=comp160106_c1_seq1 1594 1833 +
Chr1	stalkie_big_nohaplotig	exon	140648886	140648987	97	-	.	Parent=comp160106_c1_seq1.mrna1;Target=comp160106_c1_seq1 1492 1593 +
Chr1	stalkie_big_nohaplotig	exon	140649124	140649532	96	-	.	Parent=comp160106_c1_seq1.mrna1;Target=comp160106_c1_seq1 1083 1491 +
Chr1	stalkie_big_nohaplotig	exon	140649808	140650080	97	-	.	Parent=comp160106_c1_seq1.mrna1;Target=comp160106_c1_seq1 810 1082 +
Chr1	stalkie_big_nohaplotig	exon	140650172	140650363	98	-	.	Parent=comp160106_c1_seq1.mrna1;Target=comp160106_c1_seq1 618 809 +
Chr1	stalkie_big_nohaplotig	exon	140650421	140650869	97	-	.	Parent=comp160106_c1_seq1.mrna1;Target=comp160106_c1_seq1 169 617 +
Chr1	stalkie_big_nohaplotig	exon	140652146	140652285	97	-	.	Parent=comp160106_c1_seq1.mrna1;Target=comp160106_c1_seq1 29 168 +
Chr1	stalkie_big_nohaplotig	CDS	140648363	140648514	.	-	2	Parent=comp160106_c1_seq1.mrna1;Target=comp160106_c1_seq1 1834 1985 +
Chr1	stalkie_big_nohaplotig	CDS	140648584	140648823	.	-	2	Parent=comp160106_c1_seq1.mrna1;Target=comp160106_c1_seq1 1594 1833 +
Chr1	stalkie_big_nohaplotig	CDS	140648886	140648987	.	-	2	Parent=comp160106_c1_seq1.mrna1;Target=comp160106_c1_seq1 1492 1593 +
Chr1	stalkie_big_nohaplotig	CDS	140649124	140649532	.	-	0	Parent=comp160106_c1_seq1.mrna1;Target=comp160106_c1_seq1 1083 1491 +
Chr1	stalkie_big_nohaplotig	CDS	140649808	140650080	.	-	0	Parent=comp160106_c1_seq1.mrna1;Target=comp160106_c1_seq1 810 1082 +
Chr1	stalkie_big_nohaplotig	CDS	140650172	140650363	.	-	0	Parent=comp160106_c1_seq1.mrna1;Target=comp160106_c1_seq1 618 809 +
Chr1	stalkie_big_nohaplotig	CDS	140650421	140650869	.	-	2	Parent=comp160106_c1_seq1.mrna1;Target=comp160106_c1_seq1 169 617 +
Chr1	stalkie_big_nohaplotig	CDS	140652146	140652212	.	-	0	Parent=comp160106_c1_seq1.mrna1;Target=comp160106_c1_seq1 102 168 +
Chr1	gffcl	locus	140682545	140683512	.	-	.	ID=RLOC_00011803;geneIDs=comp156163_c0_seq1.path1;transcripts=comp156163_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140682545	140683512	.	-	.	ID=comp156163_c0_seq1.mrna1;geneID=comp156163_c0_seq1.path1;Name=comp156163_c0_seq1;Dir=antisensecoverage=96.5;identity=88.4;matches=589;mismatches=44;indels=33;unknowns=0;Target=comp156163_c0_seq1 512 634 .;locus=RLOC_00011803
Chr1	stalkie_big_nohaplotig	exon	140682545	140682567	100	-	.	Parent=comp156163_c0_seq1.mrna1;Target=comp156163_c0_seq1 1 23 -
Chr1	stalkie_big_nohaplotig	exon	140682872	140683512	88	-	.	Parent=comp156163_c0_seq1.mrna1;Target=comp156163_c0_seq1 24 635 -
Chr1	stalkie_big_nohaplotig	CDS	140683389	140683511	.	-	0	Parent=comp156163_c0_seq1.mrna1
Chr1	gffcl	locus	140716311	140719042	.	-	.	ID=RLOC_00011804;geneIDs=ORF1931.path1;transcripts=ORF1931.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140716311	140719042	.	-	.	ID=ORF1931.mrna1;geneID=ORF1931.path1;Name=ORF1931;Dir=sensecoverage=100.0;identity=99.0;matches=948;mismatches=9;indels=1;unknowns=0;Target=ORF1931 64 957 +;locus=RLOC_00011804
Chr1	stalkie_big_nohaplotig	exon	140716311	140717217	99	-	.	Parent=ORF1931.mrna1;Target=ORF1931 51 957 +
Chr1	stalkie_big_nohaplotig	exon	140718992	140719042	92	-	.	Parent=ORF1931.mrna1;Target=ORF1931 1 50 +
Chr1	stalkie_big_nohaplotig	CDS	140716311	140717204	.	-	0	Parent=ORF1931.mrna1
Chr1	gffcl	locus	140717792	140718410	.	+	.	ID=RLOC_00011805;geneIDs=comp142453_c0_seq1.path1;transcripts=comp142453_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140717792	140718410	.	+	.	ID=comp142453_c0_seq1.mrna1;geneID=comp142453_c0_seq1.path1;Name=comp142453_c0_seq1;Dir=indeterminatecoverage=99.7;identity=95.6;matches=592;mismatches=27;indels=0;unknowns=0;Target=comp142453_c0_seq1 619 1 .;CDS_Target=comp142453_c0_seq1 190 77 .;locus=RLOC_00011805
Chr1	stalkie_big_nohaplotig	exon	140717792	140718410	95	+	.	Parent=comp142453_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	140717868	140717981	.	+	0	Parent=comp142453_c0_seq1.mrna1
Chr1	gffcl	locus	140762958	140762996	.	+	.	ID=RLOC_00011806;geneIDs=comp148773_c0_seq1.path1;transcripts=comp148773_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140762958	140762996	.	+	.	ID=comp148773_c0_seq1.mrna1;geneID=comp148773_c0_seq1.path1;Name=comp148773_c0_seq1;Dir=indeterminatecoverage=6.5;identity=97.4;matches=38;mismatches=1;indels=0;unknowns=0;Target=comp148773_c0_seq1 39 1 .;CDS_Target=comp148773_c0_seq1 39 3 .;locus=RLOC_00011806
Chr1	stalkie_big_nohaplotig	exon	140762958	140762996	97	+	.	Parent=comp148773_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	140762960	140762996	.	+	0	Parent=comp148773_c0_seq1.mrna1
Chr1	gffcl	locus	140763038	140768492	.	-	.	ID=RLOC_00011807;geneIDs=FBgn0002773.1.path1,comp909005_c0_seq1.path1;transcripts=FBgn0002773.1.mrna1,comp909005_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140763038	140768492	.	-	.	ID=FBgn0002773.1.mrna1;geneID=FBgn0002773.1.path1;Name=FBgn0002773.1;Dir=sensecoverage=100.0;identity=99.9;matches=686;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011807
Chr1	stalkie_big_nohaplotig	exon	140763038	140763457	99	-	.	Parent=FBgn0002773.1.mrna1;Target=FBgn0002773.1 268 687 +
Chr1	stalkie_big_nohaplotig	exon	140764996	140765235	100	-	.	Parent=FBgn0002773.1.mrna1;Target=FBgn0002773.1 28 267 +
Chr1	stalkie_big_nohaplotig	exon	140768466	140768492	100	-	.	Parent=FBgn0002773.1.mrna1;Target=FBgn0002773.1 1 27 +
Chr1	stalkie_big_nohaplotig	CDS	140763038	140763457	.	-	0	Parent=FBgn0002773.1.mrna1;Target=FBgn0002773.1 268 687 +
Chr1	stalkie_big_nohaplotig	CDS	140764996	140765235	.	-	0	Parent=FBgn0002773.1.mrna1;Target=FBgn0002773.1 28 267 +
Chr1	stalkie_big_nohaplotig	CDS	140768466	140768492	.	-	0	Parent=FBgn0002773.1.mrna1;Target=FBgn0002773.1 1 27 +
Chr1	stalkie_big_nohaplotig	mRNA	140765216	140768080	.	-	.	ID=comp909005_c0_seq1.mrna1;geneID=comp909005_c0_seq1.path1;Name=comp909005_c0_seq1;Dir=sensecoverage=98.6;identity=97.3;matches=430;mismatches=4;indels=8;unknowns=0;Target=comp909005_c0_seq1 193 255 +;locus=RLOC_00011807
Chr1	stalkie_big_nohaplotig	exon	140765216	140765235	100	-	.	Parent=comp909005_c0_seq1.mrna1;Target=comp909005_c0_seq1 421 440 +
Chr1	stalkie_big_nohaplotig	exon	140767659	140768080	97	-	.	Parent=comp909005_c0_seq1.mrna1;Target=comp909005_c0_seq1 7 420 +
Chr1	stalkie_big_nohaplotig	CDS	140767824	140767886	.	-	0	Parent=comp909005_c0_seq1.mrna1
Chr1	gffcl	locus	140766777	140769629	.	-	.	ID=RLOC_00011808;geneIDs=comp138400_c0_seq1.path1;transcripts=comp138400_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140766777	140769629	.	-	.	ID=comp138400_c0_seq1.mrna1;geneID=comp138400_c0_seq1.path1;Name=comp138400_c0_seq1;Dir=indeterminatecoverage=91.6;identity=98.7;matches=375;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011808
Chr1	stalkie_big_nohaplotig	exon	140766777	140767143	98	-	.	Parent=comp138400_c0_seq1.mrna1;Target=comp138400_c0_seq1 414 48 .
Chr1	stalkie_big_nohaplotig	exon	140769617	140769629	100	-	.	Parent=comp138400_c0_seq1.mrna1;Target=comp138400_c0_seq1 47 35 .
Chr1	stalkie_big_nohaplotig	CDS	140767057	140767143	.	-	0	Parent=comp138400_c0_seq1.mrna1;Target=comp138400_c0_seq1 134 48 .
Chr1	stalkie_big_nohaplotig	CDS	140769617	140769628	.	-	0	Parent=comp138400_c0_seq1.mrna1;Target=comp138400_c0_seq1 47 36 .
Chr1	gffcl	locus	140853309	140854233	.	-	.	ID=RLOC_00011809;geneIDs=comp134706_c0_seq1.path1;transcripts=comp134706_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140853309	140854233	.	-	.	ID=comp134706_c0_seq1.mrna1;geneID=comp134706_c0_seq1.path1;Name=comp134706_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=915;mismatches=1;indels=9;unknowns=0;Target=comp134706_c0_seq1 916 1 .;CDS_Target=comp134706_c0_seq1 815 720 .;locus=RLOC_00011809
Chr1	stalkie_big_nohaplotig	exon	140853309	140854233	98	-	.	Parent=comp134706_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	140853410	140853505	.	-	0	Parent=comp134706_c0_seq1.mrna1
Chr1	gffcl	locus	140865951	140867781	.	+	.	ID=RLOC_00011810;geneIDs=comp146706_c0_seq1.path1,comp156796_c0_seq1.path1;transcripts=comp156796_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140866395	140867781	.	+	.	ID=comp156796_c0_seq1.mrna1;geneID=comp156796_c0_seq1.path1;Name=comp156796_c0_seq1;Dir=indeterminatecoverage=96.6;identity=96.6;matches=1358;mismatches=29;indels=19;unknowns=0;Target=comp156796_c0_seq1 1423 18 .;CDS_Target=comp156796_c0_seq1 304 20 .;locus=RLOC_00011810
Chr1	stalkie_big_nohaplotig	exon	140866395	140867781	96	+	.	Parent=comp156796_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	140866397	140866681	.	+	0	Parent=comp156796_c0_seq1.mrna1
Chr1	gffcl	locus	140870615	140872106	.	+	.	ID=RLOC_00011811;geneIDs=comp157705_c0_seq1.path1;transcripts=comp157705_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140870615	140872106	.	+	.	ID=comp157705_c0_seq1.mrna1;geneID=comp157705_c0_seq1.path1;Name=comp157705_c0_seq1;Dir=indeterminatecoverage=99.7;identity=97.7;matches=1465;mismatches=26;indels=9;unknowns=0;Target=comp157705_c0_seq1 1499 1 .;CDS_Target=comp157705_c0_seq1 93 1 .;locus=RLOC_00011811
Chr1	stalkie_big_nohaplotig	exon	140870615	140872106	97	+	.	Parent=comp157705_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	140870615	140870702	.	+	0	Parent=comp157705_c0_seq1.mrna1
Chr1	gffcl	locus	140872285	140873076	.	-	.	ID=RLOC_00011812;geneIDs=comp147526_c0_seq1.path1;transcripts=comp147526_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140872285	140873076	.	-	.	ID=comp147526_c0_seq1.mrna1;geneID=comp147526_c0_seq1.path1;Name=comp147526_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.9;matches=784;mismatches=4;indels=5;unknowns=0;Target=comp147526_c0_seq1 791 3 .;CDS_Target=comp147526_c0_seq1 790 644 .;locus=RLOC_00011812
Chr1	stalkie_big_nohaplotig	exon	140872285	140873076	98	-	.	Parent=comp147526_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	140872286	140872436	.	-	0	Parent=comp147526_c0_seq1.mrna1
Chr1	gffcl	locus	140893935	140894309	.	+	.	ID=RLOC_00011813;geneIDs=comp135589_c0_seq1.path1;transcripts=comp135589_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140893935	140894309	.	+	.	ID=comp135589_c0_seq1.mrna1;geneID=comp135589_c0_seq1.path1;Name=comp135589_c0_seq1;Dir=sensecoverage=93.1;identity=99.4;matches=308;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011813
Chr1	stalkie_big_nohaplotig	exon	140893935	140893974	100	+	.	Parent=comp135589_c0_seq1.mrna1;Target=comp135589_c0_seq1 23 62 +
Chr1	stalkie_big_nohaplotig	exon	140894040	140894309	99	+	.	Parent=comp135589_c0_seq1.mrna1;Target=comp135589_c0_seq1 63 332 +
Chr1	stalkie_big_nohaplotig	CDS	140893936	140893974	.	+	0	Parent=comp135589_c0_seq1.mrna1;Target=comp135589_c0_seq1 24 62 +
Chr1	stalkie_big_nohaplotig	CDS	140894040	140894147	.	+	0	Parent=comp135589_c0_seq1.mrna1;Target=comp135589_c0_seq1 63 170 +
Chr1	gffcl	locus	140895443	140896076	.	-	.	ID=RLOC_00011814;geneIDs=comp151815_c0_seq1.path1;transcripts=comp151815_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140895443	140896076	.	-	.	ID=comp151815_c0_seq1.mrna1;geneID=comp151815_c0_seq1.path1;Name=comp151815_c0_seq1;Dir=sensecoverage=83.9;identity=92.4;matches=449;mismatches=21;indels=16;unknowns=0;locus=RLOC_00011814
Chr1	stalkie_big_nohaplotig	exon	140895443	140895690	86	-	.	Parent=comp151815_c0_seq1.mrna1;Target=comp151815_c0_seq1 227 488 +
Chr1	stalkie_big_nohaplotig	exon	140895785	140895889	100	-	.	Parent=comp151815_c0_seq1.mrna1;Target=comp151815_c0_seq1 122 226 +
Chr1	stalkie_big_nohaplotig	exon	140895959	140896076	99	-	.	Parent=comp151815_c0_seq1.mrna1;Target=comp151815_c0_seq1 4 121 +
Chr1	stalkie_big_nohaplotig	CDS	140895674	140895690	.	-	2	Parent=comp151815_c0_seq1.mrna1;Target=comp151815_c0_seq1 227 243 +
Chr1	stalkie_big_nohaplotig	CDS	140895785	140895889	.	-	2	Parent=comp151815_c0_seq1.mrna1;Target=comp151815_c0_seq1 122 226 +
Chr1	stalkie_big_nohaplotig	CDS	140895959	140896004	.	-	0	Parent=comp151815_c0_seq1.mrna1;Target=comp151815_c0_seq1 76 121 +
Chr1	gffcl	locus	140901665	140902555	.	+	.	ID=RLOC_00011815;geneIDs=comp154676_c0_seq1.path1;transcripts=comp154676_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140901665	140902555	.	+	.	ID=comp154676_c0_seq1.mrna1;geneID=comp154676_c0_seq1.path1;Name=comp154676_c0_seq1;Dir=indeterminatecoverage=99.6;identity=96.3;matches=865;mismatches=20;indels=13;unknowns=0;Target=comp154676_c0_seq1 895 4 .;CDS_Target=comp154676_c0_seq1 688 125 .;locus=RLOC_00011815
Chr1	stalkie_big_nohaplotig	exon	140901665	140902555	96	+	.	Parent=comp154676_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	140901785	140902348	.	+	0	Parent=comp154676_c0_seq1.mrna1
Chr1	gffcl	locus	140931339	140933251	.	+	.	ID=RLOC_00011816;geneIDs=comp143537_c0_seq1.path1;transcripts=comp143537_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140931339	140933251	.	+	.	ID=comp143537_c0_seq1.mrna1;geneID=comp143537_c0_seq1.path1;Name=comp143537_c0_seq1;Dir=sensecoverage=95.5;identity=94.9;matches=316;mismatches=17;indels=0;unknowns=0;locus=RLOC_00011816
Chr1	stalkie_big_nohaplotig	exon	140931339	140931414	100	+	.	Parent=comp143537_c0_seq1.mrna1;Target=comp143537_c0_seq1 19 94 +
Chr1	stalkie_big_nohaplotig	exon	140931493	140931567	98	+	.	Parent=comp143537_c0_seq1.mrna1;Target=comp143537_c0_seq1 95 169 +
Chr1	stalkie_big_nohaplotig	exon	140933011	140933099	98	+	.	Parent=comp143537_c0_seq1.mrna1;Target=comp143537_c0_seq1 170 258 +
Chr1	stalkie_big_nohaplotig	exon	140933159	140933251	83	+	.	Parent=comp143537_c0_seq1.mrna1;Target=comp143537_c0_seq1 308 400 +
Chr1	stalkie_big_nohaplotig	CDS	140931339	140931414	.	+	0	Parent=comp143537_c0_seq1.mrna1;Target=comp143537_c0_seq1 19 94 +
Chr1	stalkie_big_nohaplotig	CDS	140931493	140931567	.	+	2	Parent=comp143537_c0_seq1.mrna1;Target=comp143537_c0_seq1 95 169 +
Chr1	stalkie_big_nohaplotig	CDS	140933011	140933099	.	+	2	Parent=comp143537_c0_seq1.mrna1;Target=comp143537_c0_seq1 170 258 +
Chr1	gffcl	locus	140989750	140991458	.	-	.	ID=RLOC_00011817;geneIDs=FBgn0032484.1.path1;transcripts=FBgn0032484.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	140989750	140991458	.	-	.	ID=FBgn0032484.1.mrna1;geneID=FBgn0032484.1.path1;Name=FBgn0032484.1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1691;mismatches=18;indels=1;unknowns=0;Target=FBgn0032484.1 1710 1 .;locus=RLOC_00011817
Chr1	stalkie_big_nohaplotig	exon	140989750	140991458	98	-	.	Parent=FBgn0032484.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	140989750	140991458	.	-	0	Parent=FBgn0032484.1.mrna1
Chr1	gffcl	locus	141004002	142638053	.	-	.	ID=RLOC_00011818;geneIDs=comp156018_c0_seq1.path1;transcripts=comp156018_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141004002	142638053	.	-	.	ID=comp156018_c0_seq1.mrna1;geneID=comp156018_c0_seq1.path1;Name=comp156018_c0_seq1;Dir=indeterminatecoverage=93.2;identity=81.7;matches=730;mismatches=59;indels=105;unknowns=0;locus=RLOC_00011818
Chr1	stalkie_big_nohaplotig	exon	141004002	141004010	100	-	.	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 1001 993 .
Chr1	stalkie_big_nohaplotig	exon	141011580	141011585	100	-	.	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 992 987 .
Chr1	stalkie_big_nohaplotig	exon	141011694	141011703	100	-	.	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 910 901 .
Chr1	stalkie_big_nohaplotig	exon	141014717	141014722	100	-	.	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 900 895 .
Chr1	stalkie_big_nohaplotig	exon	141017446	141017506	53	-	.	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 894 833 .
Chr1	stalkie_big_nohaplotig	exon	141036382	141036384	100	-	.	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 832 830 .
Chr1	stalkie_big_nohaplotig	exon	141042225	141042233	100	-	.	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 829 821 .
Chr1	stalkie_big_nohaplotig	exon	141042811	141042816	100	-	.	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 820 815 .
Chr1	stalkie_big_nohaplotig	exon	141044560	141044568	100	-	.	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 814 806 .
Chr1	stalkie_big_nohaplotig	exon	141045457	141045460	100	-	.	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 805 802 .
Chr1	stalkie_big_nohaplotig	exon	141055590	141055608	84	-	.	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 801 784 .
Chr1	stalkie_big_nohaplotig	exon	141066716	141066755	50	-	.	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 767 703 .
Chr1	stalkie_big_nohaplotig	exon	142625079	142625106	44	-	.	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 702 666 .
Chr1	stalkie_big_nohaplotig	exon	142630522	142630536	93	-	.	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 642 628 .
Chr1	stalkie_big_nohaplotig	exon	142633552	142633561	90	-	.	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 627 619 .
Chr1	stalkie_big_nohaplotig	exon	142637496	142638053	87	-	.	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 618 1 .
Chr1	stalkie_big_nohaplotig	CDS	141017447	141017506	.	-	1	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 893 833 .
Chr1	stalkie_big_nohaplotig	CDS	141036382	141036384	.	-	1	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 832 830 .
Chr1	stalkie_big_nohaplotig	CDS	141042225	141042233	.	-	1	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 829 821 .
Chr1	stalkie_big_nohaplotig	CDS	141042811	141042816	.	-	1	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 820 815 .
Chr1	stalkie_big_nohaplotig	CDS	141044560	141044568	.	-	1	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 814 806 .
Chr1	stalkie_big_nohaplotig	CDS	141045457	141045460	.	-	2	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 805 802 .
Chr1	stalkie_big_nohaplotig	CDS	141055590	141055596	.	-	0	Parent=comp156018_c0_seq1.mrna1;Target=comp156018_c0_seq1 801 795 .
Chr1	gffcl	locus	141069847	141069977	.	-	.	ID=RLOC_00011819;geneIDs=comp162724_c5_seq1.path2;transcripts=comp162724_c5_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	141069847	141069977	.	-	.	ID=comp162724_c5_seq1.mrna2;geneID=comp162724_c5_seq1.path2;Name=comp162724_c5_seq1;Dir=indeterminatecoverage=2.7;identity=95.4;matches=125;mismatches=5;indels=1;unknowns=0;Target=comp162724_c5_seq1 4750 4621 .;locus=RLOC_00011819
Chr1	stalkie_big_nohaplotig	exon	141069847	141069977	95	-	.	Parent=comp162724_c5_seq1.mrna2
Chr1	gffcl	locus	141099556	141104171	.	+	.	ID=RLOC_00011822;geneIDs=FBgn0052226.1.path1;transcripts=FBgn0052226.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141099556	141104171	.	+	.	ID=FBgn0052226.1.mrna1;geneID=FBgn0052226.1.path1;Name=FBgn0052226.1;Dir=sensecoverage=100.0;identity=99.7;matches=4042;mismatches=14;indels=0;unknowns=0;locus=RLOC_00011822
Chr1	stalkie_big_nohaplotig	exon	141099556	141100044	99	+	.	Parent=FBgn0052226.1.mrna1;Target=FBgn0052226.1 1 489 +
Chr1	stalkie_big_nohaplotig	exon	141100104	141100268	99	+	.	Parent=FBgn0052226.1.mrna1;Target=FBgn0052226.1 490 654 +
Chr1	stalkie_big_nohaplotig	exon	141100328	141100756	99	+	.	Parent=FBgn0052226.1.mrna1;Target=FBgn0052226.1 655 1083 +
Chr1	stalkie_big_nohaplotig	exon	141100817	141101444	99	+	.	Parent=FBgn0052226.1.mrna1;Target=FBgn0052226.1 1084 1711 +
Chr1	stalkie_big_nohaplotig	exon	141101513	141102275	99	+	.	Parent=FBgn0052226.1.mrna1;Target=FBgn0052226.1 1712 2474 +
Chr1	stalkie_big_nohaplotig	exon	141102342	141102488	99	+	.	Parent=FBgn0052226.1.mrna1;Target=FBgn0052226.1 2475 2621 +
Chr1	stalkie_big_nohaplotig	exon	141102544	141102657	100	+	.	Parent=FBgn0052226.1.mrna1;Target=FBgn0052226.1 2622 2735 +
Chr1	stalkie_big_nohaplotig	exon	141102721	141103682	99	+	.	Parent=FBgn0052226.1.mrna1;Target=FBgn0052226.1 2736 3697 +
Chr1	stalkie_big_nohaplotig	exon	141103753	141104075	99	+	.	Parent=FBgn0052226.1.mrna1;Target=FBgn0052226.1 3698 4020 +
Chr1	stalkie_big_nohaplotig	exon	141104136	141104171	97	+	.	Parent=FBgn0052226.1.mrna1;Target=FBgn0052226.1 4021 4056 +
Chr1	stalkie_big_nohaplotig	CDS	141099556	141100044	.	+	0	Parent=FBgn0052226.1.mrna1;Target=FBgn0052226.1 1 489 +
Chr1	stalkie_big_nohaplotig	CDS	141100104	141100268	.	+	0	Parent=FBgn0052226.1.mrna1;Target=FBgn0052226.1 490 654 +
Chr1	stalkie_big_nohaplotig	CDS	141100328	141100756	.	+	0	Parent=FBgn0052226.1.mrna1;Target=FBgn0052226.1 655 1083 +
Chr1	stalkie_big_nohaplotig	CDS	141100817	141101444	.	+	0	Parent=FBgn0052226.1.mrna1;Target=FBgn0052226.1 1084 1711 +
Chr1	stalkie_big_nohaplotig	CDS	141101513	141102275	.	+	2	Parent=FBgn0052226.1.mrna1;Target=FBgn0052226.1 1712 2474 +
Chr1	stalkie_big_nohaplotig	CDS	141102342	141102488	.	+	1	Parent=FBgn0052226.1.mrna1;Target=FBgn0052226.1 2475 2621 +
Chr1	stalkie_big_nohaplotig	CDS	141102544	141102657	.	+	1	Parent=FBgn0052226.1.mrna1;Target=FBgn0052226.1 2622 2735 +
Chr1	stalkie_big_nohaplotig	CDS	141102721	141103682	.	+	1	Parent=FBgn0052226.1.mrna1;Target=FBgn0052226.1 2736 3697 +
Chr1	stalkie_big_nohaplotig	CDS	141103753	141104075	.	+	2	Parent=FBgn0052226.1.mrna1;Target=FBgn0052226.1 3698 4020 +
Chr1	stalkie_big_nohaplotig	CDS	141104136	141104171	.	+	0	Parent=FBgn0052226.1.mrna1;Target=FBgn0052226.1 4021 4056 +
Chr1	gffcl	locus	141155271	141155553	.	+	.	ID=RLOC_00011824;geneIDs=comp956030_c0_seq1.path1;transcripts=comp956030_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141155271	141155553	.	+	.	ID=comp956030_c0_seq1.mrna1;geneID=comp956030_c0_seq1.path1;Name=comp956030_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=283;mismatches=0;indels=0;unknowns=0;Target=comp956030_c0_seq1 283 1 .;CDS_Target=comp956030_c0_seq1 79 2 .;locus=RLOC_00011824
Chr1	stalkie_big_nohaplotig	exon	141155271	141155553	100	+	.	Parent=comp956030_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141155272	141155349	.	+	0	Parent=comp956030_c0_seq1.mrna1
Chr1	gffcl	locus	141156123	141156460	.	-	.	ID=RLOC_00011825;geneIDs=comp98720_c0_seq1.path1;transcripts=comp98720_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141156123	141156460	.	-	.	ID=comp98720_c0_seq1.mrna1;geneID=comp98720_c0_seq1.path1;Name=comp98720_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.7;matches=320;mismatches=0;indels=18;unknowns=0;Target=comp98720_c0_seq1 320 1 .;CDS_Target=comp98720_c0_seq1 144 1 .;locus=RLOC_00011825
Chr1	stalkie_big_nohaplotig	exon	141156123	141156460	94	-	.	Parent=comp98720_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141156317	141156460	.	-	0	Parent=comp98720_c0_seq1.mrna1
Chr1	gffcl	locus	141183923	141192518	.	+	.	ID=RLOC_00011826;geneIDs=FBgn0035104.1.path1;transcripts=FBgn0035104.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141183923	141192518	.	+	.	ID=FBgn0035104.1.mrna1;geneID=FBgn0035104.1.path1;Name=FBgn0035104.1;Dir=sensecoverage=100.0;identity=100.0;matches=1164;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011826
Chr1	stalkie_big_nohaplotig	exon	141183923	141184096	100	+	.	Parent=FBgn0035104.1.mrna1;Target=FBgn0035104.1 1 174 +
Chr1	stalkie_big_nohaplotig	exon	141184565	141184845	100	+	.	Parent=FBgn0035104.1.mrna1;Target=FBgn0035104.1 175 455 +
Chr1	stalkie_big_nohaplotig	exon	141184938	141185092	100	+	.	Parent=FBgn0035104.1.mrna1;Target=FBgn0035104.1 456 610 +
Chr1	stalkie_big_nohaplotig	exon	141191965	141192518	100	+	.	Parent=FBgn0035104.1.mrna1;Target=FBgn0035104.1 611 1164 +
Chr1	stalkie_big_nohaplotig	CDS	141183923	141184096	.	+	0	Parent=FBgn0035104.1.mrna1;Target=FBgn0035104.1 1 174 +
Chr1	stalkie_big_nohaplotig	CDS	141184565	141184845	.	+	0	Parent=FBgn0035104.1.mrna1;Target=FBgn0035104.1 175 455 +
Chr1	stalkie_big_nohaplotig	CDS	141184938	141185092	.	+	1	Parent=FBgn0035104.1.mrna1;Target=FBgn0035104.1 456 610 +
Chr1	stalkie_big_nohaplotig	CDS	141191965	141192518	.	+	2	Parent=FBgn0035104.1.mrna1;Target=FBgn0035104.1 611 1164 +
Chr1	gffcl	locus	141218306	141431776	.	-	.	ID=RLOC_00011827;geneIDs=comp135576_c0_seq1.path1,comp143595_c1_seq1.path1;transcripts=comp143595_c1_seq1.mrna1,comp135576_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141218306	141431776	.	-	.	ID=comp143595_c1_seq1.mrna1;geneID=comp143595_c1_seq1.path1;Name=comp143595_c1_seq1;Dir=sensecoverage=97.9;identity=91.0;matches=926;mismatches=74;indels=18;unknowns=0;Target=comp143595_c1_seq1 776 943 +;locus=RLOC_00011827
Chr1	stalkie_big_nohaplotig	exon	141218306	141218722	99	-	.	Parent=comp143595_c1_seq1.mrna1;Target=comp143595_c1_seq1 604 1020 +
Chr1	stalkie_big_nohaplotig	exon	141218924	141219179	92	-	.	Parent=comp143595_c1_seq1.mrna1;Target=comp143595_c1_seq1 348 603 +
Chr1	stalkie_big_nohaplotig	exon	141222567	141222574	100	-	.	Parent=comp143595_c1_seq1.mrna1;Target=comp143595_c1_seq1 337 344 +
Chr1	stalkie_big_nohaplotig	exon	141223764	141223802	50	-	.	Parent=comp143595_c1_seq1.mrna1;Target=comp143595_c1_seq1 283 333 +
Chr1	stalkie_big_nohaplotig	exon	141237941	141237956	87	-	.	Parent=comp143595_c1_seq1.mrna1;Target=comp143595_c1_seq1 267 282 +
Chr1	stalkie_big_nohaplotig	exon	141242976	141242988	84	-	.	Parent=comp143595_c1_seq1.mrna1;Target=comp143595_c1_seq1 254 266 +
Chr1	stalkie_big_nohaplotig	exon	141247563	141247579	76	-	.	Parent=comp143595_c1_seq1.mrna1;Target=comp143595_c1_seq1 239 253 +
Chr1	stalkie_big_nohaplotig	exon	141431539	141431776	84	-	.	Parent=comp143595_c1_seq1.mrna1;Target=comp143595_c1_seq1 1 238 +
Chr1	stalkie_big_nohaplotig	CDS	141218383	141218550	.	-	0	Parent=comp143595_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141218700	141218916	.	-	.	ID=comp135576_c0_seq1.mrna1;geneID=comp135576_c0_seq1.path1;Name=comp135576_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=213;mismatches=4;indels=1;unknowns=0;Target=comp135576_c0_seq1 218 1 .;CDS_Target=comp135576_c0_seq1 88 2 .;locus=RLOC_00011827
Chr1	stalkie_big_nohaplotig	exon	141218700	141218916	97	-	.	Parent=comp135576_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141218829	141218915	.	-	0	Parent=comp135576_c0_seq1.mrna1
Chr1	gffcl	locus	141230917	141231585	.	+	.	ID=RLOC_00011829;geneIDs=comp138895_c0_seq1.path1;transcripts=comp138895_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141230917	141231585	.	+	.	ID=comp138895_c0_seq1.mrna1;geneID=comp138895_c0_seq1.path1;Name=comp138895_c0_seq1;Dir=indeterminatecoverage=98.4;identity=98.2;matches=657;mismatches=5;indels=7;unknowns=0;Target=comp138895_c0_seq1 663 2 .;CDS_Target=comp138895_c0_seq1 279 136 .;locus=RLOC_00011829
Chr1	stalkie_big_nohaplotig	exon	141230917	141231585	98	+	.	Parent=comp138895_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141231051	141231194	.	+	0	Parent=comp138895_c0_seq1.mrna1
Chr1	gffcl	locus	141240906	141241328	.	+	.	ID=RLOC_00011830;geneIDs=comp150995_c1_seq1.path1;transcripts=comp150995_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141240906	141241328	.	+	.	ID=comp150995_c1_seq1.mrna1;geneID=comp150995_c1_seq1.path1;Name=comp150995_c1_seq1;Dir=indeterminatecoverage=91.2;identity=100.0;matches=423;mismatches=0;indels=0;unknowns=0;Target=comp150995_c1_seq1 423 1 .;CDS_Target=comp150995_c1_seq1 312 178 .;locus=RLOC_00011830
Chr1	stalkie_big_nohaplotig	exon	141240906	141241328	100	+	.	Parent=comp150995_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141241083	141241217	.	+	0	Parent=comp150995_c1_seq1.mrna1
Chr1	gffcl	locus	141244253	141245360	.	+	.	ID=RLOC_00011831;geneIDs=comp157353_c1_seq1.path1;transcripts=comp157353_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141244253	141245360	.	+	.	ID=comp157353_c1_seq1.mrna1;geneID=comp157353_c1_seq1.path1;Name=comp157353_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1108;mismatches=0;indels=0;unknowns=0;Target=comp157353_c1_seq1 1108 1 .;CDS_Target=comp157353_c1_seq1 706 578 .;locus=RLOC_00011831
Chr1	stalkie_big_nohaplotig	exon	141244253	141245360	100	+	.	Parent=comp157353_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141244830	141244958	.	+	0	Parent=comp157353_c1_seq1.mrna1
Chr1	gffcl	locus	141246284	141249617	.	+	.	ID=RLOC_00011832;geneIDs=FBgn0004643.1.path1;transcripts=FBgn0004643.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141246284	141249617	.	+	.	ID=FBgn0004643.1.mrna1;geneID=FBgn0004643.1.path1;Name=FBgn0004643.1;Dir=sensecoverage=100.0;identity=100.0;matches=2124;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011832
Chr1	stalkie_big_nohaplotig	exon	141246284	141246976	100	+	.	Parent=FBgn0004643.1.mrna1;Target=FBgn0004643.1 1 693 +
Chr1	stalkie_big_nohaplotig	exon	141247033	141247656	100	+	.	Parent=FBgn0004643.1.mrna1;Target=FBgn0004643.1 694 1317 +
Chr1	stalkie_big_nohaplotig	exon	141248694	141249027	100	+	.	Parent=FBgn0004643.1.mrna1;Target=FBgn0004643.1 1318 1651 +
Chr1	stalkie_big_nohaplotig	exon	141249080	141249342	100	+	.	Parent=FBgn0004643.1.mrna1;Target=FBgn0004643.1 1652 1914 +
Chr1	stalkie_big_nohaplotig	exon	141249408	141249617	100	+	.	Parent=FBgn0004643.1.mrna1;Target=FBgn0004643.1 1915 2124 +
Chr1	stalkie_big_nohaplotig	CDS	141246284	141246976	.	+	0	Parent=FBgn0004643.1.mrna1;Target=FBgn0004643.1 1 693 +
Chr1	stalkie_big_nohaplotig	CDS	141247033	141247656	.	+	0	Parent=FBgn0004643.1.mrna1;Target=FBgn0004643.1 694 1317 +
Chr1	stalkie_big_nohaplotig	CDS	141248694	141249027	.	+	0	Parent=FBgn0004643.1.mrna1;Target=FBgn0004643.1 1318 1651 +
Chr1	stalkie_big_nohaplotig	CDS	141249080	141249342	.	+	2	Parent=FBgn0004643.1.mrna1;Target=FBgn0004643.1 1652 1914 +
Chr1	stalkie_big_nohaplotig	CDS	141249408	141249617	.	+	0	Parent=FBgn0004643.1.mrna1;Target=FBgn0004643.1 1915 2124 +
Chr1	gffcl	locus	141249728	141252206	.	-	.	ID=RLOC_00011833;geneIDs=FBgn0011566.1.path1;transcripts=FBgn0011566.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141249728	141252206	.	-	.	ID=FBgn0011566.1.mrna1;geneID=FBgn0011566.1.path1;Name=FBgn0011566.1;Dir=sensecoverage=100.0;identity=99.9;matches=1349;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011833
Chr1	stalkie_big_nohaplotig	exon	141249728	141249932	100	-	.	Parent=FBgn0011566.1.mrna1;Target=FBgn0011566.1 1146 1350 +
Chr1	stalkie_big_nohaplotig	exon	141250004	141250166	100	-	.	Parent=FBgn0011566.1.mrna1;Target=FBgn0011566.1 983 1145 +
Chr1	stalkie_big_nohaplotig	exon	141250407	141250692	99	-	.	Parent=FBgn0011566.1.mrna1;Target=FBgn0011566.1 697 982 +
Chr1	stalkie_big_nohaplotig	exon	141250753	141250929	100	-	.	Parent=FBgn0011566.1.mrna1;Target=FBgn0011566.1 520 696 +
Chr1	stalkie_big_nohaplotig	exon	141251571	141251701	100	-	.	Parent=FBgn0011566.1.mrna1;Target=FBgn0011566.1 389 519 +
Chr1	stalkie_big_nohaplotig	exon	141251755	141251996	100	-	.	Parent=FBgn0011566.1.mrna1;Target=FBgn0011566.1 147 388 +
Chr1	stalkie_big_nohaplotig	exon	141252061	141252206	100	-	.	Parent=FBgn0011566.1.mrna1;Target=FBgn0011566.1 1 146 +
Chr1	stalkie_big_nohaplotig	CDS	141249728	141249932	.	-	1	Parent=FBgn0011566.1.mrna1;Target=FBgn0011566.1 1146 1350 +
Chr1	stalkie_big_nohaplotig	CDS	141250004	141250166	.	-	2	Parent=FBgn0011566.1.mrna1;Target=FBgn0011566.1 983 1145 +
Chr1	stalkie_big_nohaplotig	CDS	141250407	141250692	.	-	0	Parent=FBgn0011566.1.mrna1;Target=FBgn0011566.1 697 982 +
Chr1	stalkie_big_nohaplotig	CDS	141250753	141250929	.	-	0	Parent=FBgn0011566.1.mrna1;Target=FBgn0011566.1 520 696 +
Chr1	stalkie_big_nohaplotig	CDS	141251571	141251701	.	-	2	Parent=FBgn0011566.1.mrna1;Target=FBgn0011566.1 389 519 +
Chr1	stalkie_big_nohaplotig	CDS	141251755	141251996	.	-	1	Parent=FBgn0011566.1.mrna1;Target=FBgn0011566.1 147 388 +
Chr1	stalkie_big_nohaplotig	CDS	141252061	141252206	.	-	0	Parent=FBgn0011566.1.mrna1;Target=FBgn0011566.1 1 146 +
Chr1	gffcl	locus	141266532	141267741	.	+	.	ID=RLOC_00011834;geneIDs=FBgn0025615.1.path1;transcripts=FBgn0025615.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141266532	141267741	.	+	.	ID=FBgn0025615.1.mrna1;geneID=FBgn0025615.1.path1;Name=FBgn0025615.1;Dir=sensecoverage=100.0;identity=99.8;matches=1045;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011834
Chr1	stalkie_big_nohaplotig	exon	141266532	141266751	100	+	.	Parent=FBgn0025615.1.mrna1;Target=FBgn0025615.1 1 220 +
Chr1	stalkie_big_nohaplotig	exon	141266808	141267076	100	+	.	Parent=FBgn0025615.1.mrna1;Target=FBgn0025615.1 221 489 +
Chr1	stalkie_big_nohaplotig	exon	141267132	141267577	99	+	.	Parent=FBgn0025615.1.mrna1;Target=FBgn0025615.1 490 935 +
Chr1	stalkie_big_nohaplotig	exon	141267630	141267741	100	+	.	Parent=FBgn0025615.1.mrna1;Target=FBgn0025615.1 936 1047 +
Chr1	stalkie_big_nohaplotig	CDS	141266532	141266751	.	+	0	Parent=FBgn0025615.1.mrna1;Target=FBgn0025615.1 1 220 +
Chr1	stalkie_big_nohaplotig	CDS	141266808	141267076	.	+	2	Parent=FBgn0025615.1.mrna1;Target=FBgn0025615.1 221 489 +
Chr1	stalkie_big_nohaplotig	CDS	141267132	141267577	.	+	0	Parent=FBgn0025615.1.mrna1;Target=FBgn0025615.1 490 935 +
Chr1	stalkie_big_nohaplotig	CDS	141267630	141267741	.	+	1	Parent=FBgn0025615.1.mrna1;Target=FBgn0025615.1 936 1047 +
Chr1	gffcl	locus	141267817	141268432	.	-	.	ID=RLOC_00011835;geneIDs=FBgn0029718.1.path1;transcripts=FBgn0029718.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141267817	141268432	.	-	.	ID=FBgn0029718.1.mrna1;geneID=FBgn0029718.1.path1;Name=FBgn0029718.1;Dir=sensecoverage=100.0;identity=100.0;matches=564;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011835
Chr1	stalkie_big_nohaplotig	exon	141267817	141268228	100	-	.	Parent=FBgn0029718.1.mrna1;Target=FBgn0029718.1 153 564 +
Chr1	stalkie_big_nohaplotig	exon	141268281	141268432	100	-	.	Parent=FBgn0029718.1.mrna1;Target=FBgn0029718.1 1 152 +
Chr1	stalkie_big_nohaplotig	CDS	141267817	141268228	.	-	1	Parent=FBgn0029718.1.mrna1;Target=FBgn0029718.1 153 564 +
Chr1	stalkie_big_nohaplotig	CDS	141268281	141268432	.	-	0	Parent=FBgn0029718.1.mrna1;Target=FBgn0029718.1 1 152 +
Chr1	gffcl	locus	141272069	141272521	.	-	.	ID=RLOC_00011837;geneIDs=comp143343_c0_seq1.path1;transcripts=comp143343_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141272069	141272521	.	-	.	ID=comp143343_c0_seq1.mrna1;geneID=comp143343_c0_seq1.path1;Name=comp143343_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=449;mismatches=4;indels=0;unknowns=0;Target=comp143343_c0_seq1 453 1 .;CDS_Target=comp143343_c0_seq1 411 298 .;locus=RLOC_00011837
Chr1	stalkie_big_nohaplotig	exon	141272069	141272521	99	-	.	Parent=comp143343_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141272111	141272224	.	-	0	Parent=comp143343_c0_seq1.mrna1
Chr1	gffcl	locus	141316512	141317246	.	+	.	ID=RLOC_00011838;geneIDs=comp57457_c0_seq1.path1;transcripts=comp57457_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141316512	141317246	.	+	.	ID=comp57457_c0_seq1.mrna1;geneID=comp57457_c0_seq1.path1;Name=comp57457_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=732;mismatches=3;indels=0;unknowns=0;Target=comp57457_c0_seq1 735 1 .;CDS_Target=comp57457_c0_seq1 521 318 .;locus=RLOC_00011838
Chr1	stalkie_big_nohaplotig	exon	141316512	141317246	99	+	.	Parent=comp57457_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141316829	141317032	.	+	0	Parent=comp57457_c0_seq1.mrna1
Chr1	gffcl	locus	141319030	141319338	.	-	.	ID=RLOC_00011839;geneIDs=comp118700_c1_seq1.path2;transcripts=comp118700_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	141319030	141319338	.	-	.	ID=comp118700_c1_seq1.mrna2;geneID=comp118700_c1_seq1.path2;Name=comp118700_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=308;mismatches=1;indels=0;unknowns=0;Target=comp118700_c1_seq1 309 1 .;CDS_Target=comp118700_c1_seq1 114 64 .;locus=RLOC_00011839
Chr1	stalkie_big_nohaplotig	exon	141319030	141319338	99	-	.	Parent=comp118700_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	141319225	141319275	.	-	0	Parent=comp118700_c1_seq1.mrna2
Chr1	gffcl	locus	141319574	141320416	.	-	.	ID=RLOC_00011840;geneIDs=comp153035_c0_seq1.path1;transcripts=comp153035_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141319574	141320416	.	-	.	ID=comp153035_c0_seq1.mrna1;geneID=comp153035_c0_seq1.path1;Name=comp153035_c0_seq1;Dir=indeterminatecoverage=94.4;identity=92.5;matches=817;mismatches=20;indels=46;unknowns=0;Target=comp153035_c0_seq1 877 1 .;CDS_Target=comp153035_c0_seq1 94 44 .;locus=RLOC_00011840
Chr1	stalkie_big_nohaplotig	exon	141319574	141320416	92	-	.	Parent=comp153035_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141320318	141320373	.	-	0	Parent=comp153035_c0_seq1.mrna1
Chr1	gffcl	locus	141329809	141341813	.	+	.	ID=RLOC_00011841;geneIDs=comp142910_c0_seq1.path1;transcripts=comp142910_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141329809	141341813	.	+	.	ID=comp142910_c0_seq1.mrna1;geneID=comp142910_c0_seq1.path1;Name=comp142910_c0_seq1;Dir=indeterminatecoverage=74.2;identity=99.5;matches=212;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011841
Chr1	stalkie_big_nohaplotig	exon	141329809	141329815	100	+	.	Parent=comp142910_c0_seq1.mrna1;Target=comp142910_c0_seq1 81 75 .
Chr1	stalkie_big_nohaplotig	exon	141333610	141333615	100	+	.	Parent=comp142910_c0_seq1.mrna1;Target=comp142910_c0_seq1 87 82 .
Chr1	stalkie_big_nohaplotig	exon	141341614	141341813	99	+	.	Parent=comp142910_c0_seq1.mrna1;Target=comp142910_c0_seq1 287 88 .
Chr1	stalkie_big_nohaplotig	CDS	141329811	141329815	.	+	0	Parent=comp142910_c0_seq1.mrna1;Target=comp142910_c0_seq1 81 77 .
Chr1	stalkie_big_nohaplotig	CDS	141333610	141333615	.	+	1	Parent=comp142910_c0_seq1.mrna1;Target=comp142910_c0_seq1 87 82 .
Chr1	stalkie_big_nohaplotig	CDS	141341614	141341659	.	+	1	Parent=comp142910_c0_seq1.mrna1;Target=comp142910_c0_seq1 133 88 .
Chr1	gffcl	locus	141333654	141334068	.	-	.	ID=RLOC_00011842;geneIDs=comp468358_c0_seq1.path1;transcripts=comp468358_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141333654	141334068	.	-	.	ID=comp468358_c0_seq1.mrna1;geneID=comp468358_c0_seq1.path1;Name=comp468358_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=415;mismatches=0;indels=0;unknowns=0;Target=comp468358_c0_seq1 415 1 .;CDS_Target=comp468358_c0_seq1 123 1 .;locus=RLOC_00011842
Chr1	stalkie_big_nohaplotig	exon	141333654	141334068	100	-	.	Parent=comp468358_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141333946	141334068	.	-	0	Parent=comp468358_c0_seq1.mrna1
Chr1	gffcl	locus	141343740	141349057	.	+	.	ID=RLOC_00011844;geneIDs=FBgn0030739.1.path1;transcripts=FBgn0030739.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141343740	141349057	.	+	.	ID=FBgn0030739.1.mrna1;geneID=FBgn0030739.1.path1;Name=FBgn0030739.1;Dir=sensecoverage=99.9;identity=99.1;matches=3425;mismatches=32;indels=0;unknowns=0;locus=RLOC_00011844
Chr1	stalkie_big_nohaplotig	exon	141343740	141343819	93	+	.	Parent=FBgn0030739.1.mrna1;Target=FBgn0030739.1 3 82 +
Chr1	stalkie_big_nohaplotig	exon	141343875	141344383	99	+	.	Parent=FBgn0030739.1.mrna1;Target=FBgn0030739.1 83 591 +
Chr1	stalkie_big_nohaplotig	exon	141344448	141344669	98	+	.	Parent=FBgn0030739.1.mrna1;Target=FBgn0030739.1 592 813 +
Chr1	stalkie_big_nohaplotig	exon	141344723	141345490	99	+	.	Parent=FBgn0030739.1.mrna1;Target=FBgn0030739.1 814 1581 +
Chr1	stalkie_big_nohaplotig	exon	141345566	141345898	99	+	.	Parent=FBgn0030739.1.mrna1;Target=FBgn0030739.1 1582 1914 +
Chr1	stalkie_big_nohaplotig	exon	141345954	141346233	99	+	.	Parent=FBgn0030739.1.mrna1;Target=FBgn0030739.1 1915 2194 +
Chr1	stalkie_big_nohaplotig	exon	141346863	141347017	99	+	.	Parent=FBgn0030739.1.mrna1;Target=FBgn0030739.1 2195 2349 +
Chr1	stalkie_big_nohaplotig	exon	141347078	141347504	99	+	.	Parent=FBgn0030739.1.mrna1;Target=FBgn0030739.1 2350 2776 +
Chr1	stalkie_big_nohaplotig	exon	141348313	141348530	99	+	.	Parent=FBgn0030739.1.mrna1;Target=FBgn0030739.1 2777 2994 +
Chr1	stalkie_big_nohaplotig	exon	141348593	141349057	98	+	.	Parent=FBgn0030739.1.mrna1;Target=FBgn0030739.1 2995 3459 +
Chr1	stalkie_big_nohaplotig	CDS	141343741	141343819	.	+	0	Parent=FBgn0030739.1.mrna1;Target=FBgn0030739.1 4 82 +
Chr1	stalkie_big_nohaplotig	CDS	141343875	141344383	.	+	2	Parent=FBgn0030739.1.mrna1;Target=FBgn0030739.1 83 591 +
Chr1	stalkie_big_nohaplotig	CDS	141344448	141344669	.	+	0	Parent=FBgn0030739.1.mrna1;Target=FBgn0030739.1 592 813 +
Chr1	stalkie_big_nohaplotig	CDS	141344723	141345490	.	+	0	Parent=FBgn0030739.1.mrna1;Target=FBgn0030739.1 814 1581 +
Chr1	stalkie_big_nohaplotig	CDS	141345566	141345898	.	+	0	Parent=FBgn0030739.1.mrna1;Target=FBgn0030739.1 1582 1914 +
Chr1	stalkie_big_nohaplotig	CDS	141345954	141346233	.	+	0	Parent=FBgn0030739.1.mrna1;Target=FBgn0030739.1 1915 2194 +
Chr1	stalkie_big_nohaplotig	CDS	141346863	141347017	.	+	2	Parent=FBgn0030739.1.mrna1;Target=FBgn0030739.1 2195 2349 +
Chr1	stalkie_big_nohaplotig	CDS	141347078	141347504	.	+	0	Parent=FBgn0030739.1.mrna1;Target=FBgn0030739.1 2350 2776 +
Chr1	stalkie_big_nohaplotig	CDS	141348313	141348530	.	+	2	Parent=FBgn0030739.1.mrna1;Target=FBgn0030739.1 2777 2994 +
Chr1	stalkie_big_nohaplotig	CDS	141348593	141349057	.	+	0	Parent=FBgn0030739.1.mrna1;Target=FBgn0030739.1 2995 3459 +
Chr1	gffcl	locus	141351782	141355875	.	-	.	ID=RLOC_00011845;geneIDs=FBgn0003416.1.path1;transcripts=FBgn0003416.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141351782	141355875	.	-	.	ID=FBgn0003416.1.mrna1;geneID=FBgn0003416.1.path1;Name=FBgn0003416.1;Dir=sensecoverage=100.0;identity=99.6;matches=3773;mismatches=16;indels=0;unknowns=0;locus=RLOC_00011845
Chr1	stalkie_big_nohaplotig	exon	141351782	141352876	99	-	.	Parent=FBgn0003416.1.mrna1;Target=FBgn0003416.1 2695 3789 +
Chr1	stalkie_big_nohaplotig	exon	141352938	141353794	99	-	.	Parent=FBgn0003416.1.mrna1;Target=FBgn0003416.1 1838 2694 +
Chr1	stalkie_big_nohaplotig	exon	141353860	141354337	99	-	.	Parent=FBgn0003416.1.mrna1;Target=FBgn0003416.1 1360 1837 +
Chr1	stalkie_big_nohaplotig	exon	141354517	141355875	99	-	.	Parent=FBgn0003416.1.mrna1;Target=FBgn0003416.1 1 1359 +
Chr1	stalkie_big_nohaplotig	CDS	141351782	141352876	.	-	0	Parent=FBgn0003416.1.mrna1;Target=FBgn0003416.1 2695 3789 +
Chr1	stalkie_big_nohaplotig	CDS	141352938	141353794	.	-	2	Parent=FBgn0003416.1.mrna1;Target=FBgn0003416.1 1838 2694 +
Chr1	stalkie_big_nohaplotig	CDS	141353860	141354337	.	-	0	Parent=FBgn0003416.1.mrna1;Target=FBgn0003416.1 1360 1837 +
Chr1	stalkie_big_nohaplotig	CDS	141354517	141355875	.	-	0	Parent=FBgn0003416.1.mrna1;Target=FBgn0003416.1 1 1359 +
Chr1	gffcl	locus	141357426	141365769	.	-	.	ID=RLOC_00011846;geneIDs=FBgn0002917.1.path1;transcripts=FBgn0002917.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141357426	141365769	.	-	.	ID=FBgn0002917.1.mrna1;geneID=FBgn0002917.1.path1;Name=FBgn0002917.1;Dir=sensecoverage=100.0;identity=99.4;matches=6012;mismatches=34;indels=0;unknowns=11;locus=RLOC_00011846
Chr1	stalkie_big_nohaplotig	exon	141357426	141358151	99	-	.	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 5332 6057 +
Chr1	stalkie_big_nohaplotig	exon	141358233	141358395	99	-	.	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 5169 5331 +
Chr1	stalkie_big_nohaplotig	exon	141358456	141358729	99	-	.	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 4895 5168 +
Chr1	stalkie_big_nohaplotig	exon	141358912	141358989	100	-	.	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 4817 4894 +
Chr1	stalkie_big_nohaplotig	exon	141359320	141359683	99	-	.	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 4453 4816 +
Chr1	stalkie_big_nohaplotig	exon	141359739	141359933	98	-	.	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 4258 4452 +
Chr1	stalkie_big_nohaplotig	exon	141360009	141360308	98	-	.	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 3958 4257 +
Chr1	stalkie_big_nohaplotig	exon	141360420	141361170	99	-	.	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 3207 3957 +
Chr1	stalkie_big_nohaplotig	exon	141361223	141361588	99	-	.	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 2841 3206 +
Chr1	stalkie_big_nohaplotig	exon	141361647	141361769	100	-	.	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 2718 2840 +
Chr1	stalkie_big_nohaplotig	exon	141361831	141362576	99	-	.	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 1972 2717 +
Chr1	stalkie_big_nohaplotig	exon	141362645	141363173	99	-	.	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 1443 1971 +
Chr1	stalkie_big_nohaplotig	exon	141363248	141363505	99	-	.	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 1185 1442 +
Chr1	stalkie_big_nohaplotig	exon	141363574	141363717	100	-	.	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 1041 1184 +
Chr1	stalkie_big_nohaplotig	exon	141364448	141364558	98	-	.	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 930 1040 +
Chr1	stalkie_big_nohaplotig	exon	141364620	141364732	99	-	.	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 817 929 +
Chr1	stalkie_big_nohaplotig	exon	141364954	141365769	99	-	.	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 1 816 +
Chr1	stalkie_big_nohaplotig	CDS	141357426	141358151	.	-	0	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 5332 6057 +
Chr1	stalkie_big_nohaplotig	CDS	141358233	141358395	.	-	1	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 5169 5331 +
Chr1	stalkie_big_nohaplotig	CDS	141358456	141358729	.	-	2	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 4895 5168 +
Chr1	stalkie_big_nohaplotig	CDS	141358912	141358989	.	-	2	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 4817 4894 +
Chr1	stalkie_big_nohaplotig	CDS	141359320	141359683	.	-	0	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 4453 4816 +
Chr1	stalkie_big_nohaplotig	CDS	141359739	141359933	.	-	0	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 4258 4452 +
Chr1	stalkie_big_nohaplotig	CDS	141360009	141360308	.	-	0	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 3958 4257 +
Chr1	stalkie_big_nohaplotig	CDS	141360420	141361170	.	-	1	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 3207 3957 +
Chr1	stalkie_big_nohaplotig	CDS	141361223	141361588	.	-	1	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 2841 3206 +
Chr1	stalkie_big_nohaplotig	CDS	141361647	141361769	.	-	1	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 2718 2840 +
Chr1	stalkie_big_nohaplotig	CDS	141361831	141362576	.	-	0	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 1972 2717 +
Chr1	stalkie_big_nohaplotig	CDS	141362645	141363173	.	-	1	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 1443 1971 +
Chr1	stalkie_big_nohaplotig	CDS	141363248	141363505	.	-	1	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 1185 1442 +
Chr1	stalkie_big_nohaplotig	CDS	141363574	141363717	.	-	1	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 1041 1184 +
Chr1	stalkie_big_nohaplotig	CDS	141364448	141364558	.	-	1	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 930 1040 +
Chr1	stalkie_big_nohaplotig	CDS	141364620	141364732	.	-	0	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 817 929 +
Chr1	stalkie_big_nohaplotig	CDS	141364954	141365769	.	-	0	Parent=FBgn0002917.1.mrna1;Target=FBgn0002917.1 1 816 +
Chr1	gffcl	locus	141371503	141375402	.	+	.	ID=RLOC_00011847;geneIDs=FBgn0030559.1.path1;transcripts=FBgn0030559.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141371503	141375402	.	+	.	ID=FBgn0030559.1.mrna1;geneID=FBgn0030559.1.path1;Name=FBgn0030559.1;Dir=sensecoverage=100.0;identity=99.9;matches=1085;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011847
Chr1	stalkie_big_nohaplotig	exon	141371503	141371638	99	+	.	Parent=FBgn0030559.1.mrna1;Target=FBgn0030559.1 1 136 +
Chr1	stalkie_big_nohaplotig	exon	141371701	141371851	100	+	.	Parent=FBgn0030559.1.mrna1;Target=FBgn0030559.1 137 287 +
Chr1	stalkie_big_nohaplotig	exon	141371924	141372289	100	+	.	Parent=FBgn0030559.1.mrna1;Target=FBgn0030559.1 288 653 +
Chr1	stalkie_big_nohaplotig	exon	141373320	141373380	100	+	.	Parent=FBgn0030559.1.mrna1;Target=FBgn0030559.1 654 714 +
Chr1	stalkie_big_nohaplotig	exon	141373457	141373697	100	+	.	Parent=FBgn0030559.1.mrna1;Target=FBgn0030559.1 715 955 +
Chr1	stalkie_big_nohaplotig	exon	141375272	141375402	100	+	.	Parent=FBgn0030559.1.mrna1;Target=FBgn0030559.1 956 1086 +
Chr1	stalkie_big_nohaplotig	CDS	141371503	141371638	.	+	0	Parent=FBgn0030559.1.mrna1;Target=FBgn0030559.1 1 136 +
Chr1	stalkie_big_nohaplotig	CDS	141371701	141371851	.	+	2	Parent=FBgn0030559.1.mrna1;Target=FBgn0030559.1 137 287 +
Chr1	stalkie_big_nohaplotig	CDS	141371924	141372289	.	+	1	Parent=FBgn0030559.1.mrna1;Target=FBgn0030559.1 288 653 +
Chr1	stalkie_big_nohaplotig	CDS	141373320	141373380	.	+	1	Parent=FBgn0030559.1.mrna1;Target=FBgn0030559.1 654 714 +
Chr1	stalkie_big_nohaplotig	CDS	141373457	141373697	.	+	0	Parent=FBgn0030559.1.mrna1;Target=FBgn0030559.1 715 955 +
Chr1	stalkie_big_nohaplotig	CDS	141375272	141375402	.	+	2	Parent=FBgn0030559.1.mrna1;Target=FBgn0030559.1 956 1086 +
Chr1	gffcl	locus	141375754	141376169	.	-	.	ID=RLOC_00011848;geneIDs=comp119068_c0_seq1.path1;transcripts=comp119068_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141375754	141376169	.	-	.	ID=comp119068_c0_seq1.mrna1;geneID=comp119068_c0_seq1.path1;Name=comp119068_c0_seq1;Dir=indeterminatecoverage=99.3;identity=98.6;matches=410;mismatches=4;indels=2;unknowns=0;Target=comp119068_c0_seq1 417 4 .;CDS_Target=comp119068_c0_seq1 66 4 .;locus=RLOC_00011848
Chr1	stalkie_big_nohaplotig	exon	141375754	141376169	98	-	.	Parent=comp119068_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141376107	141376169	.	-	0	Parent=comp119068_c0_seq1.mrna1
Chr1	gffcl	locus	141379032	141387119	.	+	.	ID=RLOC_00011849;geneIDs=FBgn0030366.1.path1;transcripts=FBgn0030366.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141379032	141387119	.	+	.	ID=FBgn0030366.1.mrna1;geneID=FBgn0030366.1.path1;Name=FBgn0030366.1;Dir=sensecoverage=100.0;identity=99.7;matches=3322;mismatches=11;indels=0;unknowns=0;locus=RLOC_00011849
Chr1	stalkie_big_nohaplotig	exon	141379032	141380222	99	+	.	Parent=FBgn0030366.1.mrna1;Target=FBgn0030366.1 1 1191 +
Chr1	stalkie_big_nohaplotig	exon	141380437	141381837	99	+	.	Parent=FBgn0030366.1.mrna1;Target=FBgn0030366.1 1192 2592 +
Chr1	stalkie_big_nohaplotig	exon	141386379	141387119	99	+	.	Parent=FBgn0030366.1.mrna1;Target=FBgn0030366.1 2593 3333 +
Chr1	stalkie_big_nohaplotig	CDS	141379032	141380222	.	+	0	Parent=FBgn0030366.1.mrna1;Target=FBgn0030366.1 1 1191 +
Chr1	stalkie_big_nohaplotig	CDS	141380437	141381837	.	+	0	Parent=FBgn0030366.1.mrna1;Target=FBgn0030366.1 1192 2592 +
Chr1	stalkie_big_nohaplotig	CDS	141386379	141387119	.	+	0	Parent=FBgn0030366.1.mrna1;Target=FBgn0030366.1 2593 3333 +
Chr1	gffcl	locus	141400029	141401543	.	+	.	ID=RLOC_00011850;geneIDs=comp60374_c0_seq1.path1;transcripts=comp60374_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141400029	141401543	.	+	.	ID=comp60374_c0_seq1.mrna1;geneID=comp60374_c0_seq1.path1;Name=comp60374_c0_seq1;Dir=antisensecoverage=99.8;identity=99.6;matches=1219;mismatches=1;indels=4;unknowns=0;locus=RLOC_00011850
Chr1	stalkie_big_nohaplotig	exon	141400029	141400394	98	+	.	Parent=comp60374_c0_seq1.mrna1;Target=comp60374_c0_seq1 860 1221 -
Chr1	stalkie_big_nohaplotig	exon	141400455	141400542	100	+	.	Parent=comp60374_c0_seq1.mrna1;Target=comp60374_c0_seq1 772 859 -
Chr1	stalkie_big_nohaplotig	exon	141400660	141400767	100	+	.	Parent=comp60374_c0_seq1.mrna1;Target=comp60374_c0_seq1 664 771 -
Chr1	stalkie_big_nohaplotig	exon	141400830	141401022	100	+	.	Parent=comp60374_c0_seq1.mrna1;Target=comp60374_c0_seq1 471 663 -
Chr1	stalkie_big_nohaplotig	exon	141401075	141401543	100	+	.	Parent=comp60374_c0_seq1.mrna1;Target=comp60374_c0_seq1 2 470 -
Chr1	stalkie_big_nohaplotig	CDS	141400457	141400542	.	+	0	Parent=comp60374_c0_seq1.mrna1;Target=comp60374_c0_seq1 772 857 .
Chr1	stalkie_big_nohaplotig	CDS	141400660	141400767	.	+	1	Parent=comp60374_c0_seq1.mrna1;Target=comp60374_c0_seq1 664 771 .
Chr1	stalkie_big_nohaplotig	CDS	141400830	141401022	.	+	1	Parent=comp60374_c0_seq1.mrna1;Target=comp60374_c0_seq1 471 663 .
Chr1	stalkie_big_nohaplotig	CDS	141401075	141401371	.	+	0	Parent=comp60374_c0_seq1.mrna1;Target=comp60374_c0_seq1 174 470 .
Chr1	gffcl	locus	141408435	141408829	.	-	.	ID=RLOC_00011851;geneIDs=comp135847_c0_seq1.path1;transcripts=comp135847_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141408435	141408829	.	-	.	ID=comp135847_c0_seq1.mrna1;geneID=comp135847_c0_seq1.path1;Name=comp135847_c0_seq1;Dir=indeterminatecoverage=99.7;identity=96.5;matches=381;mismatches=0;indels=14;unknowns=0;Target=comp135847_c0_seq1 382 2 .;CDS_Target=comp135847_c0_seq1 55 2 .;locus=RLOC_00011851
Chr1	stalkie_big_nohaplotig	exon	141408435	141408829	96	-	.	Parent=comp135847_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141408762	141408829	.	-	0	Parent=comp135847_c0_seq1.mrna1
Chr1	gffcl	locus	141409988	141411153	.	-	.	ID=RLOC_00011852;geneIDs=FBgn0039740.1.path1;transcripts=FBgn0039740.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141409988	141411153	.	-	.	ID=FBgn0039740.1.mrna1;geneID=FBgn0039740.1.path1;Name=FBgn0039740.1;Dir=sensecoverage=100.0;identity=99.2;matches=1101;mismatches=6;indels=3;unknowns=0;locus=RLOC_00011852
Chr1	stalkie_big_nohaplotig	exon	141409988	141410706	99	-	.	Parent=FBgn0039740.1.mrna1;Target=FBgn0039740.1 392 1110 +
Chr1	stalkie_big_nohaplotig	exon	141410766	141411153	98	-	.	Parent=FBgn0039740.1.mrna1;Target=FBgn0039740.1 1 391 +
Chr1	stalkie_big_nohaplotig	CDS	141409988	141410706	.	-	2	Parent=FBgn0039740.1.mrna1;Target=FBgn0039740.1 392 1110 +
Chr1	stalkie_big_nohaplotig	CDS	141410766	141411153	.	-	0	Parent=FBgn0039740.1.mrna1;Target=FBgn0039740.1 1 391 +
Chr1	gffcl	locus	141411604	141413354	.	-	.	ID=RLOC_00011853;geneIDs=FBgn0030365.1.path1;transcripts=FBgn0030365.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141411604	141413354	.	-	.	ID=FBgn0030365.1.mrna1;geneID=FBgn0030365.1.path1;Name=FBgn0030365.1;Dir=sensecoverage=100.0;identity=99.5;matches=1468;mismatches=8;indels=0;unknowns=0;locus=RLOC_00011853
Chr1	stalkie_big_nohaplotig	exon	141411604	141412541	99	-	.	Parent=FBgn0030365.1.mrna1;Target=FBgn0030365.1 539 1476 +
Chr1	stalkie_big_nohaplotig	exon	141412759	141413129	99	-	.	Parent=FBgn0030365.1.mrna1;Target=FBgn0030365.1 168 538 +
Chr1	stalkie_big_nohaplotig	exon	141413188	141413354	99	-	.	Parent=FBgn0030365.1.mrna1;Target=FBgn0030365.1 1 167 +
Chr1	stalkie_big_nohaplotig	CDS	141411604	141412541	.	-	2	Parent=FBgn0030365.1.mrna1;Target=FBgn0030365.1 539 1476 +
Chr1	stalkie_big_nohaplotig	CDS	141412759	141413129	.	-	1	Parent=FBgn0030365.1.mrna1;Target=FBgn0030365.1 168 538 +
Chr1	stalkie_big_nohaplotig	CDS	141413188	141413354	.	-	0	Parent=FBgn0030365.1.mrna1;Target=FBgn0030365.1 1 167 +
Chr1	gffcl	locus	141415670	141416828	.	-	.	ID=RLOC_00011854;geneIDs=FBgn0030364.1.path1;transcripts=FBgn0030364.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141415670	141416828	.	-	.	ID=FBgn0030364.1.mrna1;geneID=FBgn0030364.1.path1;Name=FBgn0030364.1;Dir=sensecoverage=100.0;identity=99.7;matches=598;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011854
Chr1	stalkie_big_nohaplotig	exon	141415670	141415759	100	-	.	Parent=FBgn0030364.1.mrna1;Target=FBgn0030364.1 511 600 +
Chr1	stalkie_big_nohaplotig	exon	141415818	141415949	100	-	.	Parent=FBgn0030364.1.mrna1;Target=FBgn0030364.1 379 510 +
Chr1	stalkie_big_nohaplotig	exon	141416012	141416128	100	-	.	Parent=FBgn0030364.1.mrna1;Target=FBgn0030364.1 262 378 +
Chr1	stalkie_big_nohaplotig	exon	141416198	141416331	98	-	.	Parent=FBgn0030364.1.mrna1;Target=FBgn0030364.1 128 261 +
Chr1	stalkie_big_nohaplotig	exon	141416702	141416828	100	-	.	Parent=FBgn0030364.1.mrna1;Target=FBgn0030364.1 1 127 +
Chr1	stalkie_big_nohaplotig	CDS	141415670	141415759	.	-	0	Parent=FBgn0030364.1.mrna1;Target=FBgn0030364.1 511 600 +
Chr1	stalkie_big_nohaplotig	CDS	141415818	141415949	.	-	0	Parent=FBgn0030364.1.mrna1;Target=FBgn0030364.1 379 510 +
Chr1	stalkie_big_nohaplotig	CDS	141416012	141416128	.	-	0	Parent=FBgn0030364.1.mrna1;Target=FBgn0030364.1 262 378 +
Chr1	stalkie_big_nohaplotig	CDS	141416198	141416331	.	-	2	Parent=FBgn0030364.1.mrna1;Target=FBgn0030364.1 128 261 +
Chr1	stalkie_big_nohaplotig	CDS	141416702	141416828	.	-	0	Parent=FBgn0030364.1.mrna1;Target=FBgn0030364.1 1 127 +
Chr1	gffcl	locus	141419366	141420876	.	+	.	ID=RLOC_00011855;geneIDs=FBgn0029713.1.path1;transcripts=FBgn0029713.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141419366	141420876	.	+	.	ID=FBgn0029713.1.mrna1;geneID=FBgn0029713.1.path1;Name=FBgn0029713.1;Dir=sensecoverage=100.0;identity=99.7;matches=1382;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011855
Chr1	stalkie_big_nohaplotig	exon	141419366	141420351	99	+	.	Parent=FBgn0029713.1.mrna1;Target=FBgn0029713.1 1 986 +
Chr1	stalkie_big_nohaplotig	exon	141420408	141420498	100	+	.	Parent=FBgn0029713.1.mrna1;Target=FBgn0029713.1 987 1077 +
Chr1	stalkie_big_nohaplotig	exon	141420568	141420876	99	+	.	Parent=FBgn0029713.1.mrna1;Target=FBgn0029713.1 1078 1386 +
Chr1	stalkie_big_nohaplotig	CDS	141419366	141420351	.	+	0	Parent=FBgn0029713.1.mrna1;Target=FBgn0029713.1 1 986 +
Chr1	stalkie_big_nohaplotig	CDS	141420408	141420498	.	+	1	Parent=FBgn0029713.1.mrna1;Target=FBgn0029713.1 987 1077 +
Chr1	stalkie_big_nohaplotig	CDS	141420568	141420876	.	+	0	Parent=FBgn0029713.1.mrna1;Target=FBgn0029713.1 1078 1386 +
Chr1	gffcl	locus	141422250	141423026	.	-	.	ID=RLOC_00011856;geneIDs=FBgn0029712.1.path1;transcripts=FBgn0029712.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141422250	141423026	.	-	.	ID=FBgn0029712.1.mrna1;geneID=FBgn0029712.1.path1;Name=FBgn0029712.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=774;mismatches=3;indels=0;unknowns=0;Target=FBgn0029712.1 777 1 .;locus=RLOC_00011856
Chr1	stalkie_big_nohaplotig	exon	141422250	141423026	99	-	.	Parent=FBgn0029712.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141422250	141423026	.	-	0	Parent=FBgn0029712.1.mrna1
Chr1	gffcl	locus	141431060	141431276	.	-	.	ID=RLOC_00011858;geneIDs=comp135576_c0_seq1.path2;transcripts=comp135576_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	141431060	141431276	.	-	.	ID=comp135576_c0_seq1.mrna2;geneID=comp135576_c0_seq1.path2;Name=comp135576_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=213;mismatches=4;indels=1;unknowns=0;Target=comp135576_c0_seq1 218 1 .;CDS_Target=comp135576_c0_seq1 88 2 .;locus=RLOC_00011858
Chr1	stalkie_big_nohaplotig	exon	141431060	141431276	97	-	.	Parent=comp135576_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	141431189	141431275	.	-	0	Parent=comp135576_c0_seq1.mrna2
Chr1	gffcl	locus	141450747	141451415	.	+	.	ID=RLOC_00011859;geneIDs=comp138895_c0_seq1.path2;transcripts=comp138895_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	141450747	141451415	.	+	.	ID=comp138895_c0_seq1.mrna2;geneID=comp138895_c0_seq1.path2;Name=comp138895_c0_seq1;Dir=indeterminatecoverage=98.4;identity=98.2;matches=657;mismatches=5;indels=7;unknowns=0;Target=comp138895_c0_seq1 663 2 .;CDS_Target=comp138895_c0_seq1 279 136 .;locus=RLOC_00011859
Chr1	stalkie_big_nohaplotig	exon	141450747	141451415	98	+	.	Parent=comp138895_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	141450881	141451024	.	+	0	Parent=comp138895_c0_seq1.mrna2
Chr1	gffcl	locus	141467579	141468457	.	-	.	ID=RLOC_00011860;geneIDs=FBgn0029975.1.path2;transcripts=FBgn0029975.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	141467579	141468457	.	-	.	ID=FBgn0029975.1.mrna2;geneID=FBgn0029975.1.path2;Name=FBgn0029975.1;Dir=sensecoverage=74.0;identity=99.2;matches=744;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011860
Chr1	stalkie_big_nohaplotig	exon	141467579	141467911	99	-	.	Parent=FBgn0029975.1.mrna2;Target=FBgn0029975.1 682 1014 +
Chr1	stalkie_big_nohaplotig	exon	141467978	141468318	99	-	.	Parent=FBgn0029975.1.mrna2;Target=FBgn0029975.1 341 681 +
Chr1	stalkie_big_nohaplotig	exon	141468382	141468457	97	-	.	Parent=FBgn0029975.1.mrna2;Target=FBgn0029975.1 265 340 +
Chr1	stalkie_big_nohaplotig	CDS	141467579	141467911	.	-	0	Parent=FBgn0029975.1.mrna2;Target=FBgn0029975.1 682 1014 +
Chr1	stalkie_big_nohaplotig	CDS	141467978	141468318	.	-	2	Parent=FBgn0029975.1.mrna2;Target=FBgn0029975.1 341 681 +
Chr1	stalkie_big_nohaplotig	CDS	141468382	141468457	.	-	0	Parent=FBgn0029975.1.mrna2;Target=FBgn0029975.1 265 340 +
Chr1	gffcl	locus	141474858	141474982	.	+	.	ID=RLOC_00011861;geneIDs=comp137587_c0_seq1.path2;transcripts=comp137587_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	141474858	141474982	.	+	.	ID=comp137587_c0_seq1.mrna2;geneID=comp137587_c0_seq1.path2;Name=comp137587_c0_seq1;Dir=indeterminatecoverage=25.8;identity=99.2;matches=124;mismatches=1;indels=0;unknowns=0;Target=comp137587_c0_seq1 485 361 .;locus=RLOC_00011861
Chr1	stalkie_big_nohaplotig	exon	141474858	141474982	99	+	.	Parent=comp137587_c0_seq1.mrna2
Chr1	gffcl	locus	141509121	141509470	.	-	.	ID=RLOC_00011862;geneIDs=comp87869_c0_seq1.path1;transcripts=comp87869_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141509121	141509470	.	-	.	ID=comp87869_c0_seq1.mrna1;geneID=comp87869_c0_seq1.path1;Name=comp87869_c0_seq1;Dir=indeterminatecoverage=93.8;identity=99.4;matches=348;mismatches=2;indels=0;unknowns=0;Target=comp87869_c0_seq1 350 1 .;CDS_Target=comp87869_c0_seq1 39 1 .;locus=RLOC_00011862
Chr1	stalkie_big_nohaplotig	exon	141509121	141509470	99	-	.	Parent=comp87869_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141509432	141509470	.	-	0	Parent=comp87869_c0_seq1.mrna1
Chr1	gffcl	locus	141517363	141517616	.	-	.	ID=RLOC_00011863;geneIDs=comp146010_c0_seq1.path1;transcripts=comp146010_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141517363	141517616	.	-	.	ID=comp146010_c0_seq1.mrna1;geneID=comp146010_c0_seq1.path1;Name=comp146010_c0_seq1;Dir=indeterminatecoverage=89.4;identity=98.4;matches=250;mismatches=4;indels=0;unknowns=0;Target=comp146010_c0_seq1 284 31 .;CDS_Target=comp146010_c0_seq1 111 31 .;locus=RLOC_00011863
Chr1	stalkie_big_nohaplotig	exon	141517363	141517616	98	-	.	Parent=comp146010_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141517536	141517616	.	-	0	Parent=comp146010_c0_seq1.mrna1
Chr1	gffcl	locus	141517823	141519333	.	-	.	ID=RLOC_00011864;geneIDs=comp136833_c0_seq1.path1,comp150598_c0_seq1.path1;transcripts=comp150598_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141517823	141518551	.	-	.	ID=comp150598_c0_seq1.mrna1;geneID=comp150598_c0_seq1.path1;Name=comp150598_c0_seq1;Dir=antisensecoverage=100.0;identity=96.7;matches=351;mismatches=7;indels=5;unknowns=0;Target=comp150598_c0_seq1 284 358 .;locus=RLOC_00011864
Chr1	stalkie_big_nohaplotig	exon	141517823	141517909	98	-	.	Parent=comp150598_c0_seq1.mrna1;Target=comp150598_c0_seq1 1 87 -
Chr1	stalkie_big_nohaplotig	exon	141517979	141518042	98	-	.	Parent=comp150598_c0_seq1.mrna1;Target=comp150598_c0_seq1 88 151 -
Chr1	stalkie_big_nohaplotig	exon	141518340	141518551	95	-	.	Parent=comp150598_c0_seq1.mrna1;Target=comp150598_c0_seq1 152 358 -
Chr1	stalkie_big_nohaplotig	CDS	141518472	141518551	.	-	0	Parent=comp150598_c0_seq1.mrna1
Chr1	gffcl	locus	141531864	141533703	.	+	.	ID=RLOC_00011865;geneIDs=FBgn0026713.1.path2;transcripts=FBgn0026713.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	141531864	141533703	.	+	.	ID=FBgn0026713.1.mrna2;geneID=FBgn0026713.1.path2;Name=FBgn0026713.1;Dir=sensecoverage=44.8;identity=99.4;matches=1637;mismatches=10;indels=0;unknowns=0;locus=RLOC_00011865
Chr1	stalkie_big_nohaplotig	exon	141531864	141532776	99	+	.	Parent=FBgn0026713.1.mrna2;Target=FBgn0026713.1 2029 2941 +
Chr1	stalkie_big_nohaplotig	exon	141532891	141533032	100	+	.	Parent=FBgn0026713.1.mrna2;Target=FBgn0026713.1 2942 3083 +
Chr1	stalkie_big_nohaplotig	exon	141533112	141533703	99	+	.	Parent=FBgn0026713.1.mrna2;Target=FBgn0026713.1 3084 3675 +
Chr1	stalkie_big_nohaplotig	CDS	141531864	141532776	.	+	0	Parent=FBgn0026713.1.mrna2;Target=FBgn0026713.1 2029 2941 +
Chr1	stalkie_big_nohaplotig	CDS	141532891	141533032	.	+	2	Parent=FBgn0026713.1.mrna2;Target=FBgn0026713.1 2942 3083 +
Chr1	stalkie_big_nohaplotig	CDS	141533112	141533703	.	+	1	Parent=FBgn0026713.1.mrna2;Target=FBgn0026713.1 3084 3675 +
Chr1	gffcl	locus	141535429	141536953	.	-	.	ID=RLOC_00011866;geneIDs=FBgn0000455.2.path1;transcripts=FBgn0000455.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141535429	141536953	.	-	.	ID=FBgn0000455.2.mrna1;geneID=FBgn0000455.2.path1;Name=FBgn0000455.2;Dir=sensecoverage=100.0;identity=99.0;matches=1459;mismatches=9;indels=5;unknowns=0;Target=FBgn0000455.2 2 52 +;locus=RLOC_00011866
Chr1	stalkie_big_nohaplotig	exon	141535429	141536683	99	-	.	Parent=FBgn0000455.2.mrna1;Target=FBgn0000455.2 219 1473 +
Chr1	stalkie_big_nohaplotig	exon	141536741	141536953	96	-	.	Parent=FBgn0000455.2.mrna1;Target=FBgn0000455.2 1 218 +
Chr1	stalkie_big_nohaplotig	CDS	141536907	141536952	.	-	0	Parent=FBgn0000455.2.mrna1
Chr1	gffcl	locus	141538097	141539789	.	+	.	ID=RLOC_00011867;geneIDs=FBgn0021856.1.path1;transcripts=FBgn0021856.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141538097	141539789	.	+	.	ID=FBgn0021856.1.mrna1;geneID=FBgn0021856.1.path1;Name=FBgn0021856.1;Dir=sensecoverage=100.0;identity=99.0;matches=817;mismatches=8;indels=0;unknowns=0;locus=RLOC_00011867
Chr1	stalkie_big_nohaplotig	exon	141538097	141538184	97	+	.	Parent=FBgn0021856.1.mrna1;Target=FBgn0021856.1 1 88 +
Chr1	stalkie_big_nohaplotig	exon	141538243	141538550	99	+	.	Parent=FBgn0021856.1.mrna1;Target=FBgn0021856.1 89 396 +
Chr1	stalkie_big_nohaplotig	exon	141539302	141539482	99	+	.	Parent=FBgn0021856.1.mrna1;Target=FBgn0021856.1 397 577 +
Chr1	stalkie_big_nohaplotig	exon	141539542	141539789	99	+	.	Parent=FBgn0021856.1.mrna1;Target=FBgn0021856.1 578 825 +
Chr1	stalkie_big_nohaplotig	CDS	141538097	141538184	.	+	0	Parent=FBgn0021856.1.mrna1;Target=FBgn0021856.1 1 88 +
Chr1	stalkie_big_nohaplotig	CDS	141538243	141538550	.	+	2	Parent=FBgn0021856.1.mrna1;Target=FBgn0021856.1 89 396 +
Chr1	stalkie_big_nohaplotig	CDS	141539302	141539482	.	+	0	Parent=FBgn0021856.1.mrna1;Target=FBgn0021856.1 397 577 +
Chr1	stalkie_big_nohaplotig	CDS	141539542	141539789	.	+	2	Parent=FBgn0021856.1.mrna1;Target=FBgn0021856.1 578 825 +
Chr1	gffcl	locus	141541551	141545659	.	-	.	ID=RLOC_00011868;geneIDs=FBgn0260450.1.path1;transcripts=FBgn0260450.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141541551	141545659	.	-	.	ID=FBgn0260450.1.mrna1;geneID=FBgn0260450.1.path1;Name=FBgn0260450.1;Dir=sensecoverage=100.0;identity=99.5;matches=2021;mismatches=10;indels=0;unknowns=0;locus=RLOC_00011868
Chr1	stalkie_big_nohaplotig	exon	141541551	141542859	99	-	.	Parent=FBgn0260450.1.mrna1;Target=FBgn0260450.1 723 2031 +
Chr1	stalkie_big_nohaplotig	exon	141544938	141545659	99	-	.	Parent=FBgn0260450.1.mrna1;Target=FBgn0260450.1 1 722 +
Chr1	stalkie_big_nohaplotig	CDS	141541551	141542859	.	-	1	Parent=FBgn0260450.1.mrna1;Target=FBgn0260450.1 723 2031 +
Chr1	stalkie_big_nohaplotig	CDS	141544938	141545659	.	-	0	Parent=FBgn0260450.1.mrna1;Target=FBgn0260450.1 1 722 +
Chr1	gffcl	locus	141549511	141550428	.	+	.	ID=RLOC_00011869;geneIDs=FBgn0030740.1.path1;transcripts=FBgn0030740.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141549511	141550428	.	+	.	ID=FBgn0030740.1.mrna1;geneID=FBgn0030740.1.path1;Name=FBgn0030740.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=911;mismatches=7;indels=0;unknowns=0;Target=FBgn0030740.1 918 1 .;locus=RLOC_00011869
Chr1	stalkie_big_nohaplotig	exon	141549511	141550428	99	+	.	Parent=FBgn0030740.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141549511	141550428	.	+	0	Parent=FBgn0030740.1.mrna1
Chr1	gffcl	locus	141552202	141553363	.	-	.	ID=RLOC_00011870;geneIDs=comp160808_c0_seq1.path1;transcripts=comp160808_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141552202	141553363	.	-	.	ID=comp160808_c0_seq1.mrna1;geneID=comp160808_c0_seq1.path1;Name=comp160808_c0_seq1;Dir=indeterminatecoverage=91.3;identity=82.3;matches=932;mismatches=165;indels=36;unknowns=0;Target=comp160808_c0_seq1 940 857 .;locus=RLOC_00011870
Chr1	stalkie_big_nohaplotig	exon	141552202	141552270	95	-	.	Parent=comp160808_c0_seq1.mrna1;Target=comp160808_c0_seq1 1189 1121 .
Chr1	stalkie_big_nohaplotig	exon	141552305	141553363	81	-	.	Parent=comp160808_c0_seq1.mrna1;Target=comp160808_c0_seq1 1120 88 .
Chr1	stalkie_big_nohaplotig	CDS	141552492	141552599	.	-	0	Parent=comp160808_c0_seq1.mrna1
Chr1	gffcl	locus	141553458	141553672	.	-	.	ID=RLOC_00011871;geneIDs=comp118285_c0_seq1.path1;transcripts=comp118285_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141553458	141553672	.	-	.	ID=comp118285_c0_seq1.mrna1;geneID=comp118285_c0_seq1.path1;Name=comp118285_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=212;mismatches=3;indels=0;unknowns=0;Target=comp118285_c0_seq1 215 1 .;CDS_Target=comp118285_c0_seq1 62 3 .;locus=RLOC_00011871
Chr1	stalkie_big_nohaplotig	exon	141553458	141553672	98	-	.	Parent=comp118285_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141553611	141553670	.	-	0	Parent=comp118285_c0_seq1.mrna1
Chr1	gffcl	locus	141557186	141563195	.	-	.	ID=RLOC_00011872;geneIDs=FBgn0024234.1.path1;transcripts=FBgn0024234.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141557186	141563195	.	-	.	ID=FBgn0024234.1.mrna1;geneID=FBgn0024234.1.path1;Name=FBgn0024234.1;Dir=sensecoverage=98.7;identity=99.6;matches=1065;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011872
Chr1	stalkie_big_nohaplotig	exon	141557186	141557252	100	-	.	Parent=FBgn0024234.1.mrna1;Target=FBgn0024234.1 1003 1069 +
Chr1	stalkie_big_nohaplotig	exon	141557313	141557761	99	-	.	Parent=FBgn0024234.1.mrna1;Target=FBgn0024234.1 554 1002 +
Chr1	stalkie_big_nohaplotig	exon	141559236	141559408	100	-	.	Parent=FBgn0024234.1.mrna1;Target=FBgn0024234.1 381 553 +
Chr1	stalkie_big_nohaplotig	exon	141562816	141563195	99	-	.	Parent=FBgn0024234.1.mrna1;Target=FBgn0024234.1 1 380 +
Chr1	stalkie_big_nohaplotig	CDS	141557187	141557252	.	-	0	Parent=FBgn0024234.1.mrna1;Target=FBgn0024234.1 1003 1068 +
Chr1	stalkie_big_nohaplotig	CDS	141557313	141557761	.	-	2	Parent=FBgn0024234.1.mrna1;Target=FBgn0024234.1 554 1002 +
Chr1	stalkie_big_nohaplotig	CDS	141559236	141559408	.	-	1	Parent=FBgn0024234.1.mrna1;Target=FBgn0024234.1 381 553 +
Chr1	stalkie_big_nohaplotig	CDS	141562816	141563195	.	-	0	Parent=FBgn0024234.1.mrna1;Target=FBgn0024234.1 1 380 +
Chr1	gffcl	locus	141604191	141609376	.	+	.	ID=RLOC_00011873;geneIDs=ORF10.path1;transcripts=ORF10.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141604191	141609376	.	+	.	ID=ORF10.mrna1;geneID=ORF10.path1;Name=ORF10;Dir=sensecoverage=99.9;identity=99.6;matches=4768;mismatches=17;indels=0;unknowns=0;locus=RLOC_00011873
Chr1	stalkie_big_nohaplotig	exon	141604191	141604367	100	+	.	Parent=ORF10.mrna1;Target=ORF10 7 183 +
Chr1	stalkie_big_nohaplotig	exon	141604475	141604591	100	+	.	Parent=ORF10.mrna1;Target=ORF10 184 300 +
Chr1	stalkie_big_nohaplotig	exon	141604658	141605252	99	+	.	Parent=ORF10.mrna1;Target=ORF10 301 895 +
Chr1	stalkie_big_nohaplotig	exon	141605388	141606490	99	+	.	Parent=ORF10.mrna1;Target=ORF10 896 1998 +
Chr1	stalkie_big_nohaplotig	exon	141606584	141609376	99	+	.	Parent=ORF10.mrna1;Target=ORF10 1999 4791 +
Chr1	stalkie_big_nohaplotig	CDS	141604191	141604367	.	+	0	Parent=ORF10.mrna1;Target=ORF10 7 183 +
Chr1	stalkie_big_nohaplotig	CDS	141604475	141604591	.	+	0	Parent=ORF10.mrna1;Target=ORF10 184 300 +
Chr1	stalkie_big_nohaplotig	CDS	141604658	141605252	.	+	0	Parent=ORF10.mrna1;Target=ORF10 301 895 +
Chr1	stalkie_big_nohaplotig	CDS	141605388	141606490	.	+	2	Parent=ORF10.mrna1;Target=ORF10 896 1998 +
Chr1	stalkie_big_nohaplotig	CDS	141606584	141609376	.	+	0	Parent=ORF10.mrna1;Target=ORF10 1999 4791 +
Chr1	gffcl	locus	141610217	141611709	.	+	.	ID=RLOC_00011874;geneIDs=comp155012_c1_seq1.path1;transcripts=comp155012_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141610217	141611709	.	+	.	ID=comp155012_c1_seq1.mrna1;geneID=comp155012_c1_seq1.path1;Name=comp155012_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1484;mismatches=8;indels=7;unknowns=0;Target=comp155012_c1_seq1 1498 1 .;CDS_Target=comp155012_c1_seq1 1218 1057 .;locus=RLOC_00011874
Chr1	stalkie_big_nohaplotig	exon	141610217	141611709	98	+	.	Parent=comp155012_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141611268	141611429	.	+	0	Parent=comp155012_c1_seq1.mrna1
Chr1	gffcl	locus	141616249	141616633	.	-	.	ID=RLOC_00011875;geneIDs=FBgn0030743.1.path1;transcripts=FBgn0030743.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141616249	141616633	.	-	.	ID=FBgn0030743.1.mrna1;geneID=FBgn0030743.1.path1;Name=FBgn0030743.1;Dir=sensecoverage=100.0;identity=99.7;matches=329;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011875
Chr1	stalkie_big_nohaplotig	exon	141616249	141616418	100	-	.	Parent=FBgn0030743.1.mrna1;Target=FBgn0030743.1 161 330 +
Chr1	stalkie_big_nohaplotig	exon	141616474	141616633	99	-	.	Parent=FBgn0030743.1.mrna1;Target=FBgn0030743.1 1 160 +
Chr1	stalkie_big_nohaplotig	CDS	141616249	141616418	.	-	2	Parent=FBgn0030743.1.mrna1;Target=FBgn0030743.1 161 330 +
Chr1	stalkie_big_nohaplotig	CDS	141616474	141616633	.	-	0	Parent=FBgn0030743.1.mrna1;Target=FBgn0030743.1 1 160 +
Chr1	gffcl	locus	141631149	141631457	.	-	.	ID=RLOC_00011877;geneIDs=comp118700_c1_seq1.path1;transcripts=comp118700_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141631149	141631457	.	-	.	ID=comp118700_c1_seq1.mrna1;geneID=comp118700_c1_seq1.path1;Name=comp118700_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=309;mismatches=0;indels=0;unknowns=0;Target=comp118700_c1_seq1 309 1 .;CDS_Target=comp118700_c1_seq1 114 64 .;locus=RLOC_00011877
Chr1	stalkie_big_nohaplotig	exon	141631149	141631457	100	-	.	Parent=comp118700_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141631344	141631394	.	-	0	Parent=comp118700_c1_seq1.mrna1
Chr1	gffcl	locus	141633462	141637104	.	-	.	ID=RLOC_00011878;geneIDs=ORF857.path1;transcripts=ORF857.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141633462	141637104	.	-	.	ID=ORF857.mrna1;geneID=ORF857.path1;Name=ORF857;Dir=sensecoverage=100.0;identity=99.7;matches=1376;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011878
Chr1	stalkie_big_nohaplotig	exon	141633462	141633733	100	-	.	Parent=ORF857.mrna1;Target=ORF857 1109 1380 +
Chr1	stalkie_big_nohaplotig	exon	141633836	141634249	100	-	.	Parent=ORF857.mrna1;Target=ORF857 695 1108 +
Chr1	stalkie_big_nohaplotig	exon	141634328	141634468	100	-	.	Parent=ORF857.mrna1;Target=ORF857 554 694 +
Chr1	stalkie_big_nohaplotig	exon	141636552	141637104	99	-	.	Parent=ORF857.mrna1;Target=ORF857 1 553 +
Chr1	stalkie_big_nohaplotig	CDS	141633462	141633733	.	-	2	Parent=ORF857.mrna1;Target=ORF857 1109 1380 +
Chr1	stalkie_big_nohaplotig	CDS	141633836	141634249	.	-	2	Parent=ORF857.mrna1;Target=ORF857 695 1108 +
Chr1	stalkie_big_nohaplotig	CDS	141634328	141634468	.	-	2	Parent=ORF857.mrna1;Target=ORF857 554 694 +
Chr1	stalkie_big_nohaplotig	CDS	141636552	141637104	.	-	0	Parent=ORF857.mrna1;Target=ORF857 1 553 +
Chr1	gffcl	locus	141651781	141652791	.	+	.	ID=RLOC_00011879;geneIDs=FBgn0030484.1.path2;transcripts=FBgn0030484.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	141651781	141652791	.	+	.	ID=FBgn0030484.1.mrna2;geneID=FBgn0030484.1.path2;Name=FBgn0030484.1;Dir=sensecoverage=76.9;identity=99.3;matches=580;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011879
Chr1	stalkie_big_nohaplotig	exon	141651781	141651830	98	+	.	Parent=FBgn0030484.1.mrna2;Target=FBgn0030484.1 176 225 +
Chr1	stalkie_big_nohaplotig	exon	141651896	141652132	99	+	.	Parent=FBgn0030484.1.mrna2;Target=FBgn0030484.1 226 462 +
Chr1	stalkie_big_nohaplotig	exon	141652421	141652556	99	+	.	Parent=FBgn0030484.1.mrna2;Target=FBgn0030484.1 463 598 +
Chr1	stalkie_big_nohaplotig	exon	141652631	141652791	100	+	.	Parent=FBgn0030484.1.mrna2;Target=FBgn0030484.1 599 759 +
Chr1	stalkie_big_nohaplotig	CDS	141651781	141651830	.	+	1	Parent=FBgn0030484.1.mrna2;Target=FBgn0030484.1 176 225 +
Chr1	stalkie_big_nohaplotig	CDS	141651896	141652132	.	+	2	Parent=FBgn0030484.1.mrna2;Target=FBgn0030484.1 226 462 +
Chr1	stalkie_big_nohaplotig	CDS	141652421	141652556	.	+	2	Parent=FBgn0030484.1.mrna2;Target=FBgn0030484.1 463 598 +
Chr1	stalkie_big_nohaplotig	CDS	141652631	141652791	.	+	1	Parent=FBgn0030484.1.mrna2;Target=FBgn0030484.1 599 759 +
Chr1	gffcl	locus	141656073	141656481	.	+	.	ID=RLOC_00011880;geneIDs=comp155609_c0_seq1.path1;transcripts=comp155609_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141656073	141656481	.	+	.	ID=comp155609_c0_seq1.mrna1;geneID=comp155609_c0_seq1.path1;Name=comp155609_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=399;mismatches=8;indels=4;unknowns=0;Target=comp155609_c0_seq1 409 1 .;CDS_Target=comp155609_c0_seq1 323 123 .;locus=RLOC_00011880
Chr1	stalkie_big_nohaplotig	exon	141656073	141656481	97	+	.	Parent=comp155609_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141656195	141656395	.	+	0	Parent=comp155609_c0_seq1.mrna1
Chr1	gffcl	locus	141656826	141657656	.	+	.	ID=RLOC_00011881;geneIDs=comp157424_c0_seq1.path1;transcripts=comp157424_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141656826	141657656	.	+	.	ID=comp157424_c0_seq1.mrna1;geneID=comp157424_c0_seq1.path1;Name=comp157424_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.1;matches=822;mismatches=5;indels=28;unknowns=0;Target=comp157424_c0_seq1 851 1 .;CDS_Target=comp157424_c0_seq1 125 3 .;locus=RLOC_00011881
Chr1	stalkie_big_nohaplotig	exon	141656826	141657656	96	+	.	Parent=comp157424_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141656828	141656950	.	+	0	Parent=comp157424_c0_seq1.mrna1
Chr1	gffcl	locus	141676378	141676733	.	+	.	ID=RLOC_00011882;geneIDs=comp87869_c0_seq1.path2;transcripts=comp87869_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	141676378	141676733	.	+	.	ID=comp87869_c0_seq1.mrna2;geneID=comp87869_c0_seq1.path2;Name=comp87869_c0_seq1;Dir=indeterminatecoverage=95.4;identity=98.9;matches=352;mismatches=4;indels=0;unknowns=0;Target=comp87869_c0_seq1 356 1 .;CDS_Target=comp87869_c0_seq1 39 1 .;locus=RLOC_00011882
Chr1	stalkie_big_nohaplotig	exon	141676378	141676733	98	+	.	Parent=comp87869_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	141676378	141676416	.	+	0	Parent=comp87869_c0_seq1.mrna2
Chr1	gffcl	locus	141676893	141693063	.	+	.	ID=RLOC_00011883;geneIDs=FBgn0040153.1.path1;transcripts=FBgn0040153.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141676893	141693063	.	+	.	ID=FBgn0040153.1.mrna1;geneID=FBgn0040153.1.path1;Name=FBgn0040153.1;Dir=sensecoverage=100.0;identity=99.5;matches=737;mismatches=2;indels=2;unknowns=0;Target=FBgn0040153.1 2 46 +;locus=RLOC_00011883
Chr1	stalkie_big_nohaplotig	exon	141676893	141677257	98	+	.	Parent=FBgn0040153.1.mrna1;Target=FBgn0040153.1 1 367 +
Chr1	stalkie_big_nohaplotig	exon	141691512	141691690	100	+	.	Parent=FBgn0040153.1.mrna1;Target=FBgn0040153.1 368 546 +
Chr1	stalkie_big_nohaplotig	exon	141692801	141692905	100	+	.	Parent=FBgn0040153.1.mrna1;Target=FBgn0040153.1 547 651 +
Chr1	stalkie_big_nohaplotig	exon	141692974	141693063	100	+	.	Parent=FBgn0040153.1.mrna1;Target=FBgn0040153.1 652 741 +
Chr1	stalkie_big_nohaplotig	CDS	141676894	141676936	.	+	0	Parent=FBgn0040153.1.mrna1
Chr1	gffcl	locus	141695241	141697392	.	-	.	ID=RLOC_00011884;geneIDs=FBgn0026713.1.path1;transcripts=FBgn0026713.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141695241	141697392	.	-	.	ID=FBgn0026713.1.mrna1;geneID=FBgn0026713.1.path1;Name=FBgn0026713.1;Dir=sensecoverage=55.2;identity=99.9;matches=2026;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011884
Chr1	stalkie_big_nohaplotig	exon	141695241	141695434	98	-	.	Parent=FBgn0026713.1.mrna1;Target=FBgn0026713.1 1835 2028 +
Chr1	stalkie_big_nohaplotig	exon	141695497	141696275	100	-	.	Parent=FBgn0026713.1.mrna1;Target=FBgn0026713.1 1056 1834 +
Chr1	stalkie_big_nohaplotig	exon	141696338	141697392	100	-	.	Parent=FBgn0026713.1.mrna1;Target=FBgn0026713.1 1 1055 +
Chr1	stalkie_big_nohaplotig	CDS	141695241	141695434	.	-	2	Parent=FBgn0026713.1.mrna1;Target=FBgn0026713.1 1835 2028 +
Chr1	stalkie_big_nohaplotig	CDS	141695497	141696275	.	-	1	Parent=FBgn0026713.1.mrna1;Target=FBgn0026713.1 1056 1834 +
Chr1	stalkie_big_nohaplotig	CDS	141696338	141697392	.	-	0	Parent=FBgn0026713.1.mrna1;Target=FBgn0026713.1 1 1055 +
Chr1	gffcl	locus	141699204	141700028	.	-	.	ID=RLOC_00011885;geneIDs=FBgn0030099.1.path1;transcripts=FBgn0030099.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141699204	141700028	.	-	.	ID=FBgn0030099.1.mrna1;geneID=FBgn0030099.1.path1;Name=FBgn0030099.1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=812;mismatches=13;indels=0;unknowns=0;Target=FBgn0030099.1 825 1 .;locus=RLOC_00011885
Chr1	stalkie_big_nohaplotig	exon	141699204	141700028	98	-	.	Parent=FBgn0030099.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141699204	141700028	.	-	0	Parent=FBgn0030099.1.mrna1
Chr1	gffcl	locus	141701025	141703726	.	+	.	ID=RLOC_00011886;geneIDs=FBgn0050357.5.path1;transcripts=FBgn0050357.5.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141701025	141703726	.	+	.	ID=FBgn0050357.5.mrna1;geneID=FBgn0050357.5.path1;Name=FBgn0050357.5;Dir=sensecoverage=100.0;identity=99.1;matches=1451;mismatches=13;indels=0;unknowns=0;locus=RLOC_00011886
Chr1	stalkie_big_nohaplotig	exon	141701025	141701072	97	+	.	Parent=FBgn0050357.5.mrna1;Target=FBgn0050357.5 1 48 +
Chr1	stalkie_big_nohaplotig	exon	141701137	141701258	97	+	.	Parent=FBgn0050357.5.mrna1;Target=FBgn0050357.5 49 170 +
Chr1	stalkie_big_nohaplotig	exon	141701325	141701404	98	+	.	Parent=FBgn0050357.5.mrna1;Target=FBgn0050357.5 171 250 +
Chr1	stalkie_big_nohaplotig	exon	141702361	141703055	99	+	.	Parent=FBgn0050357.5.mrna1;Target=FBgn0050357.5 251 945 +
Chr1	stalkie_big_nohaplotig	exon	141703123	141703322	99	+	.	Parent=FBgn0050357.5.mrna1;Target=FBgn0050357.5 946 1145 +
Chr1	stalkie_big_nohaplotig	exon	141703408	141703726	99	+	.	Parent=FBgn0050357.5.mrna1;Target=FBgn0050357.5 1146 1464 +
Chr1	stalkie_big_nohaplotig	CDS	141701025	141701072	.	+	0	Parent=FBgn0050357.5.mrna1;Target=FBgn0050357.5 1 48 +
Chr1	stalkie_big_nohaplotig	CDS	141701137	141701258	.	+	0	Parent=FBgn0050357.5.mrna1;Target=FBgn0050357.5 49 170 +
Chr1	stalkie_big_nohaplotig	CDS	141701325	141701404	.	+	1	Parent=FBgn0050357.5.mrna1;Target=FBgn0050357.5 171 250 +
Chr1	stalkie_big_nohaplotig	CDS	141702361	141703055	.	+	2	Parent=FBgn0050357.5.mrna1;Target=FBgn0050357.5 251 945 +
Chr1	stalkie_big_nohaplotig	CDS	141703123	141703322	.	+	0	Parent=FBgn0050357.5.mrna1;Target=FBgn0050357.5 946 1145 +
Chr1	stalkie_big_nohaplotig	CDS	141703408	141703726	.	+	1	Parent=FBgn0050357.5.mrna1;Target=FBgn0050357.5 1146 1464 +
Chr1	gffcl	locus	141715591	141716873	.	-	.	ID=RLOC_00011888;geneIDs=comp148307_c0_seq1.path1;transcripts=comp148307_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141715591	141716873	.	-	.	ID=comp148307_c0_seq1.mrna1;geneID=comp148307_c0_seq1.path1;Name=comp148307_c0_seq1;Dir=sensecoverage=95.8;identity=96.5;matches=572;mismatches=7;indels=14;unknowns=0;locus=RLOC_00011888
Chr1	stalkie_big_nohaplotig	exon	141715591	141715924	94	-	.	Parent=comp148307_c0_seq1.mrna1;Target=comp148307_c0_seq1 273 606 +
Chr1	stalkie_big_nohaplotig	exon	141716421	141716538	98	-	.	Parent=comp148307_c0_seq1.mrna1;Target=comp148307_c0_seq1 155 272 +
Chr1	stalkie_big_nohaplotig	exon	141716740	141716873	99	-	.	Parent=comp148307_c0_seq1.mrna1;Target=comp148307_c0_seq1 21 154 +
Chr1	stalkie_big_nohaplotig	CDS	141715796	141715924	.	-	0	Parent=comp148307_c0_seq1.mrna1;Target=comp148307_c0_seq1 273 401 +
Chr1	stalkie_big_nohaplotig	CDS	141716421	141716538	.	-	1	Parent=comp148307_c0_seq1.mrna1;Target=comp148307_c0_seq1 155 272 +
Chr1	stalkie_big_nohaplotig	CDS	141716740	141716762	.	-	0	Parent=comp148307_c0_seq1.mrna1;Target=comp148307_c0_seq1 132 154 +
Chr1	gffcl	locus	141735962	141736129	.	-	.	ID=RLOC_00011889;geneIDs=comp145602_c1_seq1.path2;transcripts=comp145602_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	141735962	141736129	.	-	.	ID=comp145602_c1_seq1.mrna2;geneID=comp145602_c1_seq1.path2;Name=comp145602_c1_seq1;Dir=antisensecoverage=19.1;identity=100.0;matches=86;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011889
Chr1	stalkie_big_nohaplotig	exon	141735962	141735997	100	-	.	Parent=comp145602_c1_seq1.mrna2;Target=comp145602_c1_seq1 366 401 -
Chr1	stalkie_big_nohaplotig	exon	141736080	141736129	100	-	.	Parent=comp145602_c1_seq1.mrna2;Target=comp145602_c1_seq1 402 451 -
Chr1	gffcl	locus	141794272	141804653	.	-	.	ID=RLOC_00011890;geneIDs=FBgn0259163.1.path1;transcripts=FBgn0259163.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141794272	141804653	.	-	.	ID=FBgn0259163.1.mrna1;geneID=FBgn0259163.1.path1;Name=FBgn0259163.1;Dir=sensecoverage=100.0;identity=99.7;matches=2622;mismatches=9;indels=0;unknowns=0;locus=RLOC_00011890
Chr1	stalkie_big_nohaplotig	exon	141794272	141794900	99	-	.	Parent=FBgn0259163.1.mrna1;Target=FBgn0259163.1 2003 2631 +
Chr1	stalkie_big_nohaplotig	exon	141794967	141795222	100	-	.	Parent=FBgn0259163.1.mrna1;Target=FBgn0259163.1 1747 2002 +
Chr1	stalkie_big_nohaplotig	exon	141795284	141795408	100	-	.	Parent=FBgn0259163.1.mrna1;Target=FBgn0259163.1 1622 1746 +
Chr1	stalkie_big_nohaplotig	exon	141795544	141796202	99	-	.	Parent=FBgn0259163.1.mrna1;Target=FBgn0259163.1 963 1621 +
Chr1	stalkie_big_nohaplotig	exon	141796307	141796583	100	-	.	Parent=FBgn0259163.1.mrna1;Target=FBgn0259163.1 686 962 +
Chr1	stalkie_big_nohaplotig	exon	141799967	141800242	99	-	.	Parent=FBgn0259163.1.mrna1;Target=FBgn0259163.1 410 685 +
Chr1	stalkie_big_nohaplotig	exon	141800496	141800760	99	-	.	Parent=FBgn0259163.1.mrna1;Target=FBgn0259163.1 145 409 +
Chr1	stalkie_big_nohaplotig	exon	141804510	141804653	100	-	.	Parent=FBgn0259163.1.mrna1;Target=FBgn0259163.1 1 144 +
Chr1	stalkie_big_nohaplotig	CDS	141794272	141794900	.	-	2	Parent=FBgn0259163.1.mrna1;Target=FBgn0259163.1 2003 2631 +
Chr1	stalkie_big_nohaplotig	CDS	141794967	141795222	.	-	0	Parent=FBgn0259163.1.mrna1;Target=FBgn0259163.1 1747 2002 +
Chr1	stalkie_big_nohaplotig	CDS	141795284	141795408	.	-	2	Parent=FBgn0259163.1.mrna1;Target=FBgn0259163.1 1622 1746 +
Chr1	stalkie_big_nohaplotig	CDS	141795544	141796202	.	-	1	Parent=FBgn0259163.1.mrna1;Target=FBgn0259163.1 963 1621 +
Chr1	stalkie_big_nohaplotig	CDS	141796307	141796583	.	-	2	Parent=FBgn0259163.1.mrna1;Target=FBgn0259163.1 686 962 +
Chr1	stalkie_big_nohaplotig	CDS	141799967	141800242	.	-	2	Parent=FBgn0259163.1.mrna1;Target=FBgn0259163.1 410 685 +
Chr1	stalkie_big_nohaplotig	CDS	141800496	141800760	.	-	0	Parent=FBgn0259163.1.mrna1;Target=FBgn0259163.1 145 409 +
Chr1	stalkie_big_nohaplotig	CDS	141804510	141804653	.	-	0	Parent=FBgn0259163.1.mrna1;Target=FBgn0259163.1 1 144 +
Chr1	gffcl	locus	141805093	141805739	.	+	.	ID=RLOC_00011891;geneIDs=comp116365_c0_seq1.path1;transcripts=comp116365_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141805093	141805739	.	+	.	ID=comp116365_c0_seq1.mrna1;geneID=comp116365_c0_seq1.path1;Name=comp116365_c0_seq1;Dir=indeterminatecoverage=72.9;identity=90.7;matches=569;mismatches=20;indels=38;unknowns=0;Target=comp116365_c0_seq1 411 232 .;locus=RLOC_00011891
Chr1	stalkie_big_nohaplotig	exon	141805093	141805455	98	+	.	Parent=comp116365_c0_seq1.mrna1;Target=comp116365_c0_seq1 594 232 .
Chr1	stalkie_big_nohaplotig	exon	141805476	141805739	80	+	.	Parent=comp116365_c0_seq1.mrna1;Target=comp116365_c0_seq1 852 627 .
Chr1	stalkie_big_nohaplotig	CDS	141805093	141805272	.	+	0	Parent=comp116365_c0_seq1.mrna1
Chr1	gffcl	locus	141810900	141812000	.	+	.	ID=RLOC_00011892;geneIDs=comp155977_c1_seq1.path1;transcripts=comp155977_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141810900	141812000	.	+	.	ID=comp155977_c1_seq1.mrna1;geneID=comp155977_c1_seq1.path1;Name=comp155977_c1_seq1;Dir=indeterminatecoverage=92.1;identity=97.6;matches=1075;mismatches=23;indels=3;unknowns=0;Target=comp155977_c1_seq1 1098 1 .;CDS_Target=comp155977_c1_seq1 941 762 .;locus=RLOC_00011892
Chr1	stalkie_big_nohaplotig	exon	141810900	141812000	97	+	.	Parent=comp155977_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141811664	141811843	.	+	0	Parent=comp155977_c1_seq1.mrna1
Chr1	gffcl	locus	141874224	141950961	.	+	.	ID=RLOC_00011893;geneIDs=comp52582_c0_seq1.path1;transcripts=comp52582_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141874224	141950961	.	+	.	ID=comp52582_c0_seq1.mrna1;geneID=comp52582_c0_seq1.path1;Name=comp52582_c0_seq1;Dir=indeterminatecoverage=86.1;identity=98.9;matches=258;mismatches=2;indels=1;unknowns=0;Target=comp52582_c0_seq1 266 198 .;locus=RLOC_00011893
Chr1	stalkie_big_nohaplotig	exon	141874224	141874234	100	+	.	Parent=comp52582_c0_seq1.mrna1;Target=comp52582_c0_seq1 53 43 .
Chr1	stalkie_big_nohaplotig	exon	141876646	141876662	82	+	.	Parent=comp52582_c0_seq1.mrna1;Target=comp52582_c0_seq1 69 54 .
Chr1	stalkie_big_nohaplotig	exon	141876794	141876801	100	+	.	Parent=comp52582_c0_seq1.mrna1;Target=comp52582_c0_seq1 77 70 .
Chr1	stalkie_big_nohaplotig	exon	141890590	141890605	100	+	.	Parent=comp52582_c0_seq1.mrna1;Target=comp52582_c0_seq1 93 78 .
Chr1	stalkie_big_nohaplotig	exon	141894833	141894836	100	+	.	Parent=comp52582_c0_seq1.mrna1;Target=comp52582_c0_seq1 97 94 .
Chr1	stalkie_big_nohaplotig	exon	141908148	141908149	100	+	.	Parent=comp52582_c0_seq1.mrna1;Target=comp52582_c0_seq1 99 98 .
Chr1	stalkie_big_nohaplotig	exon	141913211	141913216	100	+	.	Parent=comp52582_c0_seq1.mrna1;Target=comp52582_c0_seq1 105 100 .
Chr1	stalkie_big_nohaplotig	exon	141928301	141928304	100	+	.	Parent=comp52582_c0_seq1.mrna1;Target=comp52582_c0_seq1 109 106 .
Chr1	stalkie_big_nohaplotig	exon	141932932	141932933	100	+	.	Parent=comp52582_c0_seq1.mrna1;Target=comp52582_c0_seq1 111 110 .
Chr1	stalkie_big_nohaplotig	exon	141936958	141936959	100	+	.	Parent=comp52582_c0_seq1.mrna1;Target=comp52582_c0_seq1 113 112 .
Chr1	stalkie_big_nohaplotig	exon	141950773	141950961	100	+	.	Parent=comp52582_c0_seq1.mrna1;Target=comp52582_c0_seq1 302 114 .
Chr1	stalkie_big_nohaplotig	CDS	141950857	141950925	.	+	0	Parent=comp52582_c0_seq1.mrna1
Chr1	gffcl	locus	141916290	141916743	.	-	.	ID=RLOC_00011895;geneIDs=comp134450_c0_seq1.path1;transcripts=comp134450_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141916290	141916743	.	-	.	ID=comp134450_c0_seq1.mrna1;geneID=comp134450_c0_seq1.path1;Name=comp134450_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=454;mismatches=0;indels=0;unknowns=0;Target=comp134450_c0_seq1 454 1 .;CDS_Target=comp134450_c0_seq1 185 3 .;locus=RLOC_00011895
Chr1	stalkie_big_nohaplotig	exon	141916290	141916743	100	-	.	Parent=comp134450_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141916559	141916741	.	-	0	Parent=comp134450_c0_seq1.mrna1
Chr1	gffcl	locus	141941634	141941921	.	-	.	ID=RLOC_00011897;geneIDs=comp148439_c0_seq1.path1;transcripts=comp148439_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141941634	141941921	.	-	.	ID=comp148439_c0_seq1.mrna1;geneID=comp148439_c0_seq1.path1;Name=comp148439_c0_seq1;Dir=indeterminatecoverage=96.0;identity=99.7;matches=287;mismatches=1;indels=0;unknowns=0;Target=comp148439_c0_seq1 288 1 .;CDS_Target=comp148439_c0_seq1 45 1 .;locus=RLOC_00011897
Chr1	stalkie_big_nohaplotig	exon	141941634	141941921	99	-	.	Parent=comp148439_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141941877	141941921	.	-	0	Parent=comp148439_c0_seq1.mrna1
Chr1	gffcl	locus	141946572	141946964	.	-	.	ID=RLOC_00011898;geneIDs=comp137829_c0_seq1.path1;transcripts=comp137829_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141946572	141946964	.	-	.	ID=comp137829_c0_seq1.mrna1;geneID=comp137829_c0_seq1.path1;Name=comp137829_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=389;mismatches=4;indels=0;unknowns=0;Target=comp137829_c0_seq1 393 1 .;CDS_Target=comp137829_c0_seq1 217 2 .;locus=RLOC_00011898
Chr1	stalkie_big_nohaplotig	exon	141946572	141946964	98	-	.	Parent=comp137829_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141946748	141946963	.	-	0	Parent=comp137829_c0_seq1.mrna1
Chr1	gffcl	locus	141947132	141947569	.	-	.	ID=RLOC_00011899;geneIDs=comp150923_c0_seq1.path1;transcripts=comp150923_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141947132	141947569	.	-	.	ID=comp150923_c0_seq1.mrna1;geneID=comp150923_c0_seq1.path1;Name=comp150923_c0_seq1;Dir=indeterminatecoverage=98.9;identity=98.9;matches=434;mismatches=3;indels=2;unknowns=0;Target=comp150923_c0_seq1 443 6 .;CDS_Target=comp150923_c0_seq1 82 44 .;locus=RLOC_00011899
Chr1	stalkie_big_nohaplotig	exon	141947132	141947569	98	-	.	Parent=comp150923_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141947493	141947530	.	-	0	Parent=comp150923_c0_seq1.mrna1
Chr1	gffcl	locus	141947584	141948574	.	+	.	ID=RLOC_00011900;geneIDs=comp155650_c0_seq1.path1;transcripts=comp155650_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141947584	141948574	.	+	.	ID=comp155650_c0_seq1.mrna1;geneID=comp155650_c0_seq1.path1;Name=comp155650_c0_seq1;Dir=indeterminatecoverage=93.7;identity=97.3;matches=899;mismatches=21;indels=4;unknowns=0;locus=RLOC_00011900
Chr1	stalkie_big_nohaplotig	exon	141947584	141947650	100	+	.	Parent=comp155650_c0_seq1.mrna1;Target=comp155650_c0_seq1 129 63 .
Chr1	stalkie_big_nohaplotig	exon	141947722	141948574	97	+	.	Parent=comp155650_c0_seq1.mrna1;Target=comp155650_c0_seq1 986 130 .
Chr1	stalkie_big_nohaplotig	CDS	141947584	141947650	.	+	0	Parent=comp155650_c0_seq1.mrna1;Target=comp155650_c0_seq1 129 63 .
Chr1	stalkie_big_nohaplotig	CDS	141947722	141947804	.	+	2	Parent=comp155650_c0_seq1.mrna1;Target=comp155650_c0_seq1 212 130 .
Chr1	gffcl	locus	141949751	141950576	.	.	.	ID=RLOC_00011901;geneIDs=comp169137_c0_seq1.path1,comp174914_c1_seq1.path1;transcripts=comp174914_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141949751	141950250	.	+	.	ID=comp174914_c1_seq1.mrna1;geneID=comp174914_c1_seq1.path1;Name=comp174914_c1_seq1;Dir=indeterminatecoverage=94.4;identity=99.8;matches=500;mismatches=0;indels=1;unknowns=0;Target=comp174914_c1_seq1 501 1 .;CDS_Target=comp174914_c1_seq1 500 375 .;locus=RLOC_00011901
Chr1	stalkie_big_nohaplotig	exon	141949751	141950250	99	+	.	Parent=comp174914_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	141950124	141950249	.	+	0	Parent=comp174914_c1_seq1.mrna1
Chr1	gffcl	locus	141955785	141956811	.	+	.	ID=RLOC_00011902;geneIDs=FBgn0026170.1.path1;transcripts=FBgn0026170.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141955785	141956811	.	+	.	ID=FBgn0026170.1.mrna1;geneID=FBgn0026170.1.path1;Name=FBgn0026170.1;Dir=sensecoverage=100.0;identity=100.0;matches=279;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011902
Chr1	stalkie_big_nohaplotig	exon	141955785	141955814	100	+	.	Parent=FBgn0026170.1.mrna1;Target=FBgn0026170.1 1 30 +
Chr1	stalkie_big_nohaplotig	exon	141956497	141956616	100	+	.	Parent=FBgn0026170.1.mrna1;Target=FBgn0026170.1 31 150 +
Chr1	stalkie_big_nohaplotig	exon	141956683	141956811	100	+	.	Parent=FBgn0026170.1.mrna1;Target=FBgn0026170.1 151 279 +
Chr1	stalkie_big_nohaplotig	CDS	141955785	141955814	.	+	0	Parent=FBgn0026170.1.mrna1;Target=FBgn0026170.1 1 30 +
Chr1	stalkie_big_nohaplotig	CDS	141956497	141956616	.	+	0	Parent=FBgn0026170.1.mrna1;Target=FBgn0026170.1 31 150 +
Chr1	stalkie_big_nohaplotig	CDS	141956683	141956811	.	+	0	Parent=FBgn0026170.1.mrna1;Target=FBgn0026170.1 151 279 +
Chr1	gffcl	locus	141959004	141973018	.	+	.	ID=RLOC_00011903;geneIDs=comp52125_c0_seq1.path1;transcripts=comp52125_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141959004	141973018	.	+	.	ID=comp52125_c0_seq1.mrna1;geneID=comp52125_c0_seq1.path1;Name=comp52125_c0_seq1;Dir=indeterminatecoverage=53.7;identity=100.0;matches=124;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011903
Chr1	stalkie_big_nohaplotig	exon	141959004	141959006	100	+	.	Parent=comp52125_c0_seq1.mrna1;Target=comp52125_c0_seq1 110 108 .
Chr1	stalkie_big_nohaplotig	exon	141964457	141964462	100	+	.	Parent=comp52125_c0_seq1.mrna1;Target=comp52125_c0_seq1 116 111 .
Chr1	stalkie_big_nohaplotig	exon	141970146	141970149	100	+	.	Parent=comp52125_c0_seq1.mrna1;Target=comp52125_c0_seq1 120 117 .
Chr1	stalkie_big_nohaplotig	exon	141972908	141973018	100	+	.	Parent=comp52125_c0_seq1.mrna1;Target=comp52125_c0_seq1 231 121 .
Chr1	stalkie_big_nohaplotig	CDS	141964457	141964462	.	+	1	Parent=comp52125_c0_seq1.mrna1;Target=comp52125_c0_seq1 116 111 .
Chr1	stalkie_big_nohaplotig	CDS	141970146	141970149	.	+	1	Parent=comp52125_c0_seq1.mrna1;Target=comp52125_c0_seq1 120 117 .
Chr1	stalkie_big_nohaplotig	CDS	141972908	141972935	.	+	0	Parent=comp52125_c0_seq1.mrna1;Target=comp52125_c0_seq1 148 121 .
Chr1	gffcl	locus	141960210	141961644	.	-	.	ID=RLOC_00011904;geneIDs=FBgn0035134.1.path1;transcripts=FBgn0035134.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141960210	141961644	.	-	.	ID=FBgn0035134.1.mrna1;geneID=FBgn0035134.1.path1;Name=FBgn0035134.1;Dir=sensecoverage=100.0;identity=98.9;matches=1169;mismatches=7;indels=6;unknowns=0;locus=RLOC_00011904
Chr1	stalkie_big_nohaplotig	exon	141960210	141960928	98	-	.	Parent=FBgn0035134.1.mrna1;Target=FBgn0035134.1 458 1182 +
Chr1	stalkie_big_nohaplotig	exon	141960992	141961298	99	-	.	Parent=FBgn0035134.1.mrna1;Target=FBgn0035134.1 151 457 +
Chr1	stalkie_big_nohaplotig	exon	141961495	141961644	100	-	.	Parent=FBgn0035134.1.mrna1;Target=FBgn0035134.1 1 150 +
Chr1	stalkie_big_nohaplotig	CDS	141960210	141960928	.	-	2	Parent=FBgn0035134.1.mrna1;Target=FBgn0035134.1 458 1182 +
Chr1	stalkie_big_nohaplotig	CDS	141960992	141961298	.	-	0	Parent=FBgn0035134.1.mrna1;Target=FBgn0035134.1 151 457 +
Chr1	stalkie_big_nohaplotig	CDS	141961495	141961644	.	-	0	Parent=FBgn0035134.1.mrna1;Target=FBgn0035134.1 1 150 +
Chr1	gffcl	locus	141962880	141964677	.	+	.	ID=RLOC_00011905;geneIDs=FBgn0034379.1.path1;transcripts=FBgn0034379.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141962880	141964677	.	+	.	ID=FBgn0034379.1.mrna1;geneID=FBgn0034379.1.path1;Name=FBgn0034379.1;Dir=sensecoverage=100.0;identity=98.5;matches=1599;mismatches=21;indels=3;unknowns=0;locus=RLOC_00011905
Chr1	stalkie_big_nohaplotig	exon	141962880	141962981	93	+	.	Parent=FBgn0034379.1.mrna1;Target=FBgn0034379.1 1 102 +
Chr1	stalkie_big_nohaplotig	exon	141963045	141963991	98	+	.	Parent=FBgn0034379.1.mrna1;Target=FBgn0034379.1 103 1052 +
Chr1	stalkie_big_nohaplotig	exon	141964050	141964431	99	+	.	Parent=FBgn0034379.1.mrna1;Target=FBgn0034379.1 1053 1434 +
Chr1	stalkie_big_nohaplotig	exon	141964489	141964677	100	+	.	Parent=FBgn0034379.1.mrna1;Target=FBgn0034379.1 1435 1623 +
Chr1	stalkie_big_nohaplotig	CDS	141962880	141962981	.	+	0	Parent=FBgn0034379.1.mrna1;Target=FBgn0034379.1 1 102 +
Chr1	stalkie_big_nohaplotig	CDS	141963045	141963991	.	+	0	Parent=FBgn0034379.1.mrna1;Target=FBgn0034379.1 103 1052 +
Chr1	stalkie_big_nohaplotig	CDS	141964050	141964431	.	+	1	Parent=FBgn0034379.1.mrna1;Target=FBgn0034379.1 1053 1434 +
Chr1	stalkie_big_nohaplotig	CDS	141964489	141964677	.	+	0	Parent=FBgn0034379.1.mrna1;Target=FBgn0034379.1 1435 1623 +
Chr1	gffcl	locus	141965618	141966454	.	-	.	ID=RLOC_00011906;geneIDs=FBgn0086710.1.path1;transcripts=FBgn0086710.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141965618	141966454	.	-	.	ID=FBgn0086710.1.mrna1;geneID=FBgn0086710.1.path1;Name=FBgn0086710.1;Dir=sensecoverage=100.0;identity=99.4;matches=340;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011906
Chr1	stalkie_big_nohaplotig	exon	141965618	141965783	99	-	.	Parent=FBgn0086710.1.mrna1;Target=FBgn0086710.1 177 342 +
Chr1	stalkie_big_nohaplotig	exon	141966212	141966357	99	-	.	Parent=FBgn0086710.1.mrna1;Target=FBgn0086710.1 31 176 +
Chr1	stalkie_big_nohaplotig	exon	141966425	141966454	100	-	.	Parent=FBgn0086710.1.mrna1;Target=FBgn0086710.1 1 30 +
Chr1	stalkie_big_nohaplotig	CDS	141965618	141965783	.	-	1	Parent=FBgn0086710.1.mrna1;Target=FBgn0086710.1 177 342 +
Chr1	stalkie_big_nohaplotig	CDS	141966212	141966357	.	-	0	Parent=FBgn0086710.1.mrna1;Target=FBgn0086710.1 31 176 +
Chr1	stalkie_big_nohaplotig	CDS	141966425	141966454	.	-	0	Parent=FBgn0086710.1.mrna1;Target=FBgn0086710.1 1 30 +
Chr1	gffcl	locus	141967779	141968477	.	+	.	ID=RLOC_00011907;geneIDs=FBgn0038673.1.path1;transcripts=FBgn0038673.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141967779	141968477	.	+	.	ID=FBgn0038673.1.mrna1;geneID=FBgn0038673.1.path1;Name=FBgn0038673.1;Dir=sensecoverage=100.0;identity=100.0;matches=588;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011907
Chr1	stalkie_big_nohaplotig	exon	141967779	141967956	100	+	.	Parent=FBgn0038673.1.mrna1;Target=FBgn0038673.1 1 178 +
Chr1	stalkie_big_nohaplotig	exon	141968010	141968144	100	+	.	Parent=FBgn0038673.1.mrna1;Target=FBgn0038673.1 179 313 +
Chr1	stalkie_big_nohaplotig	exon	141968203	141968477	100	+	.	Parent=FBgn0038673.1.mrna1;Target=FBgn0038673.1 314 588 +
Chr1	stalkie_big_nohaplotig	CDS	141967779	141967956	.	+	0	Parent=FBgn0038673.1.mrna1;Target=FBgn0038673.1 1 178 +
Chr1	stalkie_big_nohaplotig	CDS	141968010	141968144	.	+	2	Parent=FBgn0038673.1.mrna1;Target=FBgn0038673.1 179 313 +
Chr1	stalkie_big_nohaplotig	CDS	141968203	141968477	.	+	2	Parent=FBgn0038673.1.mrna1;Target=FBgn0038673.1 314 588 +
Chr1	gffcl	locus	141969950	141972582	.	+	.	ID=RLOC_00011908;geneIDs=FBgn0261524.1.path1;transcripts=FBgn0261524.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141969950	141972582	.	+	.	ID=FBgn0261524.1.mrna1;geneID=FBgn0261524.1.path1;Name=FBgn0261524.1;Dir=sensecoverage=100.0;identity=99.6;matches=1103;mismatches=2;indels=2;unknowns=0;locus=RLOC_00011908
Chr1	stalkie_big_nohaplotig	exon	141969950	141970123	98	+	.	Parent=FBgn0261524.1.mrna1;Target=FBgn0261524.1 1 176 +
Chr1	stalkie_big_nohaplotig	exon	141970199	141970589	99	+	.	Parent=FBgn0261524.1.mrna1;Target=FBgn0261524.1 177 567 +
Chr1	stalkie_big_nohaplotig	exon	141971183	141971315	100	+	.	Parent=FBgn0261524.1.mrna1;Target=FBgn0261524.1 568 700 +
Chr1	stalkie_big_nohaplotig	exon	141971373	141971578	100	+	.	Parent=FBgn0261524.1.mrna1;Target=FBgn0261524.1 701 906 +
Chr1	stalkie_big_nohaplotig	exon	141972382	141972582	100	+	.	Parent=FBgn0261524.1.mrna1;Target=FBgn0261524.1 907 1107 +
Chr1	stalkie_big_nohaplotig	CDS	141970065	141970123	.	+	0	Parent=FBgn0261524.1.mrna1;Target=FBgn0261524.1 118 176 +
Chr1	stalkie_big_nohaplotig	CDS	141970199	141970589	.	+	1	Parent=FBgn0261524.1.mrna1;Target=FBgn0261524.1 177 567 +
Chr1	stalkie_big_nohaplotig	CDS	141971183	141971315	.	+	0	Parent=FBgn0261524.1.mrna1;Target=FBgn0261524.1 568 700 +
Chr1	stalkie_big_nohaplotig	CDS	141971373	141971578	.	+	2	Parent=FBgn0261524.1.mrna1;Target=FBgn0261524.1 701 906 +
Chr1	stalkie_big_nohaplotig	CDS	141972382	141972582	.	+	0	Parent=FBgn0261524.1.mrna1;Target=FBgn0261524.1 907 1107 +
Chr1	gffcl	locus	141976527	141977287	.	+	.	ID=RLOC_00011909;geneIDs=FBgn0030449.2.path1;transcripts=FBgn0030449.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141976527	141977287	.	+	.	ID=FBgn0030449.2.mrna1;geneID=FBgn0030449.2.path1;Name=FBgn0030449.2;Dir=sensecoverage=100.0;identity=99.4;matches=623;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011909
Chr1	stalkie_big_nohaplotig	exon	141976527	141976727	100	+	.	Parent=FBgn0030449.2.mrna1;Target=FBgn0030449.2 1 201 +
Chr1	stalkie_big_nohaplotig	exon	141976796	141977017	98	+	.	Parent=FBgn0030449.2.mrna1;Target=FBgn0030449.2 202 423 +
Chr1	stalkie_big_nohaplotig	exon	141977084	141977287	100	+	.	Parent=FBgn0030449.2.mrna1;Target=FBgn0030449.2 424 627 +
Chr1	stalkie_big_nohaplotig	CDS	141976527	141976727	.	+	0	Parent=FBgn0030449.2.mrna1;Target=FBgn0030449.2 1 201 +
Chr1	stalkie_big_nohaplotig	CDS	141976796	141977017	.	+	0	Parent=FBgn0030449.2.mrna1;Target=FBgn0030449.2 202 423 +
Chr1	stalkie_big_nohaplotig	CDS	141977084	141977287	.	+	0	Parent=FBgn0030449.2.mrna1;Target=FBgn0030449.2 424 627 +
Chr1	gffcl	locus	141979440	141981575	.	+	.	ID=RLOC_00011910;geneIDs=FBgn0030447.1.path1;transcripts=FBgn0030447.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141979440	141981575	.	+	.	ID=FBgn0030447.1.mrna1;geneID=FBgn0030447.1.path1;Name=FBgn0030447.1;Dir=sensecoverage=99.6;identity=98.9;matches=730;mismatches=8;indels=0;unknowns=0;locus=RLOC_00011910
Chr1	stalkie_big_nohaplotig	exon	141979440	141979561	96	+	.	Parent=FBgn0030447.1.mrna1;Target=FBgn0030447.1 4 125 +
Chr1	stalkie_big_nohaplotig	exon	141979615	141980166	99	+	.	Parent=FBgn0030447.1.mrna1;Target=FBgn0030447.1 126 677 +
Chr1	stalkie_big_nohaplotig	exon	141981512	141981575	100	+	.	Parent=FBgn0030447.1.mrna1;Target=FBgn0030447.1 678 741 +
Chr1	stalkie_big_nohaplotig	CDS	141979440	141979561	.	+	0	Parent=FBgn0030447.1.mrna1;Target=FBgn0030447.1 4 125 +
Chr1	stalkie_big_nohaplotig	CDS	141979615	141980166	.	+	1	Parent=FBgn0030447.1.mrna1;Target=FBgn0030447.1 126 677 +
Chr1	stalkie_big_nohaplotig	CDS	141981512	141981575	.	+	1	Parent=FBgn0030447.1.mrna1;Target=FBgn0030447.1 678 741 +
Chr1	gffcl	locus	141983199	141994742	.	-	.	ID=RLOC_00011911;geneIDs=FBgn0263005.1.path1;transcripts=FBgn0263005.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	141983199	141994742	.	-	.	ID=FBgn0263005.1.mrna1;geneID=FBgn0263005.1.path1;Name=FBgn0263005.1;Dir=sensecoverage=98.9;identity=99.6;matches=2332;mismatches=8;indels=1;unknowns=0;Target=FBgn0263005.1 27 65 +;locus=RLOC_00011911
Chr1	stalkie_big_nohaplotig	exon	141983199	141983623	100	-	.	Parent=FBgn0263005.1.mrna1;Target=FBgn0263005.1 1943 2367 +
Chr1	stalkie_big_nohaplotig	exon	141985176	141985356	100	-	.	Parent=FBgn0263005.1.mrna1;Target=FBgn0263005.1 1762 1942 +
Chr1	stalkie_big_nohaplotig	exon	141985415	141985726	99	-	.	Parent=FBgn0263005.1.mrna1;Target=FBgn0263005.1 1450 1761 +
Chr1	stalkie_big_nohaplotig	exon	141985782	141986375	99	-	.	Parent=FBgn0263005.1.mrna1;Target=FBgn0263005.1 856 1449 +
Chr1	stalkie_big_nohaplotig	exon	141986443	141986598	99	-	.	Parent=FBgn0263005.1.mrna1;Target=FBgn0263005.1 700 855 +
Chr1	stalkie_big_nohaplotig	exon	141994071	141994742	99	-	.	Parent=FBgn0263005.1.mrna1;Target=FBgn0263005.1 27 699 +
Chr1	stalkie_big_nohaplotig	CDS	141994705	141994742	.	-	0	Parent=FBgn0263005.1.mrna1
Chr1	gffcl	locus	142016302	142017124	.	+	.	ID=RLOC_00011912;geneIDs=FBgn0030943.1.path1;transcripts=FBgn0030943.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142016302	142017124	.	+	.	ID=FBgn0030943.1.mrna1;geneID=FBgn0030943.1.path1;Name=FBgn0030943.1;Dir=sensecoverage=99.5;identity=99.5;matches=763;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011912
Chr1	stalkie_big_nohaplotig	exon	142016302	142016929	99	+	.	Parent=FBgn0030943.1.mrna1;Target=FBgn0030943.1 5 632 +
Chr1	stalkie_big_nohaplotig	exon	142016986	142017124	98	+	.	Parent=FBgn0030943.1.mrna1;Target=FBgn0030943.1 633 771 +
Chr1	stalkie_big_nohaplotig	CDS	142016304	142016929	.	+	0	Parent=FBgn0030943.1.mrna1;Target=FBgn0030943.1 7 632 +
Chr1	stalkie_big_nohaplotig	CDS	142016986	142017124	.	+	1	Parent=FBgn0030943.1.mrna1;Target=FBgn0030943.1 633 771 +
Chr1	gffcl	locus	142017470	142018561	.	-	.	ID=RLOC_00011913;geneIDs=FBgn0030944.1.path1;transcripts=FBgn0030944.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142017470	142018561	.	-	.	ID=FBgn0030944.1.mrna1;geneID=FBgn0030944.1.path1;Name=FBgn0030944.1;Dir=sensecoverage=100.0;identity=99.9;matches=728;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011913
Chr1	stalkie_big_nohaplotig	exon	142017470	142017640	99	-	.	Parent=FBgn0030944.1.mrna1;Target=FBgn0030944.1 559 729 +
Chr1	stalkie_big_nohaplotig	exon	142017874	142018045	100	-	.	Parent=FBgn0030944.1.mrna1;Target=FBgn0030944.1 387 558 +
Chr1	stalkie_big_nohaplotig	exon	142018118	142018340	100	-	.	Parent=FBgn0030944.1.mrna1;Target=FBgn0030944.1 164 386 +
Chr1	stalkie_big_nohaplotig	exon	142018399	142018561	100	-	.	Parent=FBgn0030944.1.mrna1;Target=FBgn0030944.1 1 163 +
Chr1	stalkie_big_nohaplotig	CDS	142017470	142017640	.	-	0	Parent=FBgn0030944.1.mrna1;Target=FBgn0030944.1 559 729 +
Chr1	stalkie_big_nohaplotig	CDS	142017874	142018045	.	-	1	Parent=FBgn0030944.1.mrna1;Target=FBgn0030944.1 387 558 +
Chr1	stalkie_big_nohaplotig	CDS	142018118	142018340	.	-	2	Parent=FBgn0030944.1.mrna1;Target=FBgn0030944.1 164 386 +
Chr1	stalkie_big_nohaplotig	CDS	142018399	142018561	.	-	0	Parent=FBgn0030944.1.mrna1;Target=FBgn0030944.1 1 163 +
Chr1	gffcl	locus	142020153	142024502	.	+	.	ID=RLOC_00011914;geneIDs=FBgn0030631.1.path1;transcripts=FBgn0030631.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142020153	142024502	.	+	.	ID=FBgn0030631.1.mrna1;geneID=FBgn0030631.1.path1;Name=FBgn0030631.1;Dir=sensecoverage=100.0;identity=99.8;matches=3254;mismatches=7;indels=0;unknowns=0;locus=RLOC_00011914
Chr1	stalkie_big_nohaplotig	exon	142020153	142020177	100	+	.	Parent=FBgn0030631.1.mrna1;Target=FBgn0030631.1 1 25 +
Chr1	stalkie_big_nohaplotig	exon	142020245	142020298	100	+	.	Parent=FBgn0030631.1.mrna1;Target=FBgn0030631.1 26 79 +
Chr1	stalkie_big_nohaplotig	exon	142021138	142021312	100	+	.	Parent=FBgn0030631.1.mrna1;Target=FBgn0030631.1 80 254 +
Chr1	stalkie_big_nohaplotig	exon	142021366	142022383	99	+	.	Parent=FBgn0030631.1.mrna1;Target=FBgn0030631.1 255 1272 +
Chr1	stalkie_big_nohaplotig	exon	142022447	142023447	99	+	.	Parent=FBgn0030631.1.mrna1;Target=FBgn0030631.1 1273 2273 +
Chr1	stalkie_big_nohaplotig	exon	142023515	142024502	100	+	.	Parent=FBgn0030631.1.mrna1;Target=FBgn0030631.1 2274 3261 +
Chr1	stalkie_big_nohaplotig	CDS	142020153	142020177	.	+	0	Parent=FBgn0030631.1.mrna1;Target=FBgn0030631.1 1 25 +
Chr1	stalkie_big_nohaplotig	CDS	142020245	142020298	.	+	2	Parent=FBgn0030631.1.mrna1;Target=FBgn0030631.1 26 79 +
Chr1	stalkie_big_nohaplotig	CDS	142021138	142021312	.	+	2	Parent=FBgn0030631.1.mrna1;Target=FBgn0030631.1 80 254 +
Chr1	stalkie_big_nohaplotig	CDS	142021366	142022383	.	+	1	Parent=FBgn0030631.1.mrna1;Target=FBgn0030631.1 255 1272 +
Chr1	stalkie_big_nohaplotig	CDS	142022447	142023447	.	+	0	Parent=FBgn0030631.1.mrna1;Target=FBgn0030631.1 1273 2273 +
Chr1	stalkie_big_nohaplotig	CDS	142023515	142024502	.	+	1	Parent=FBgn0030631.1.mrna1;Target=FBgn0030631.1 2274 3261 +
Chr1	gffcl	locus	142025910	142033137	.	+	.	ID=RLOC_00011915;geneIDs=FBgn0015926.1.path1;transcripts=FBgn0015926.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142025910	142033137	.	+	.	ID=FBgn0015926.1.mrna1;geneID=FBgn0015926.1.path1;Name=FBgn0015926.1;Dir=sensecoverage=100.0;identity=99.1;matches=1865;mismatches=16;indels=0;unknowns=0;locus=RLOC_00011915
Chr1	stalkie_big_nohaplotig	exon	142025910	142026135	97	+	.	Parent=FBgn0015926.1.mrna1;Target=FBgn0015926.1 1 226 +
Chr1	stalkie_big_nohaplotig	exon	142026193	142026412	99	+	.	Parent=FBgn0015926.1.mrna1;Target=FBgn0015926.1 227 446 +
Chr1	stalkie_big_nohaplotig	exon	142026476	142026725	100	+	.	Parent=FBgn0015926.1.mrna1;Target=FBgn0015926.1 447 696 +
Chr1	stalkie_big_nohaplotig	exon	142026782	142027072	98	+	.	Parent=FBgn0015926.1.mrna1;Target=FBgn0015926.1 697 987 +
Chr1	stalkie_big_nohaplotig	exon	142027135	142027390	100	+	.	Parent=FBgn0015926.1.mrna1;Target=FBgn0015926.1 988 1243 +
Chr1	stalkie_big_nohaplotig	exon	142027448	142027532	100	+	.	Parent=FBgn0015926.1.mrna1;Target=FBgn0015926.1 1244 1328 +
Chr1	stalkie_big_nohaplotig	exon	142027823	142027940	98	+	.	Parent=FBgn0015926.1.mrna1;Target=FBgn0015926.1 1329 1446 +
Chr1	stalkie_big_nohaplotig	exon	142028003	142028114	99	+	.	Parent=FBgn0015926.1.mrna1;Target=FBgn0015926.1 1447 1558 +
Chr1	stalkie_big_nohaplotig	exon	142032815	142033137	100	+	.	Parent=FBgn0015926.1.mrna1;Target=FBgn0015926.1 1559 1881 +
Chr1	stalkie_big_nohaplotig	CDS	142025973	142026135	.	+	0	Parent=FBgn0015926.1.mrna1;Target=FBgn0015926.1 64 226 +
Chr1	stalkie_big_nohaplotig	CDS	142026193	142026412	.	+	2	Parent=FBgn0015926.1.mrna1;Target=FBgn0015926.1 227 446 +
Chr1	stalkie_big_nohaplotig	CDS	142026476	142026725	.	+	1	Parent=FBgn0015926.1.mrna1;Target=FBgn0015926.1 447 696 +
Chr1	stalkie_big_nohaplotig	CDS	142026782	142027072	.	+	0	Parent=FBgn0015926.1.mrna1;Target=FBgn0015926.1 697 987 +
Chr1	stalkie_big_nohaplotig	CDS	142027135	142027390	.	+	0	Parent=FBgn0015926.1.mrna1;Target=FBgn0015926.1 988 1243 +
Chr1	stalkie_big_nohaplotig	CDS	142027448	142027532	.	+	2	Parent=FBgn0015926.1.mrna1;Target=FBgn0015926.1 1244 1328 +
Chr1	stalkie_big_nohaplotig	CDS	142027823	142027940	.	+	1	Parent=FBgn0015926.1.mrna1;Target=FBgn0015926.1 1329 1446 +
Chr1	stalkie_big_nohaplotig	CDS	142028003	142028114	.	+	0	Parent=FBgn0015926.1.mrna1;Target=FBgn0015926.1 1447 1558 +
Chr1	stalkie_big_nohaplotig	CDS	142032815	142033137	.	+	2	Parent=FBgn0015926.1.mrna1;Target=FBgn0015926.1 1559 1881 +
Chr1	gffcl	locus	142029111	142030078	.	+	.	ID=RLOC_00011916;geneIDs=comp162389_c0_seq1.path1;transcripts=comp162389_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142029111	142030078	.	+	.	ID=comp162389_c0_seq1.mrna1;geneID=comp162389_c0_seq1.path1;Name=comp162389_c0_seq1;Dir=indeterminatecoverage=38.1;identity=96.0;matches=844;mismatches=23;indels=12;unknowns=100;Target=comp162389_c0_seq1 978 1 .;CDS_Target=comp162389_c0_seq1 925 827 .;locus=RLOC_00011916
Chr1	stalkie_big_nohaplotig	exon	142029111	142030078	96	+	.	Parent=comp162389_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142029927	142030025	.	+	0	Parent=comp162389_c0_seq1.mrna1
Chr1	gffcl	locus	142043733	142045143	.	+	.	ID=RLOC_00011917;geneIDs=comp159590_c0_seq1.path7;transcripts=comp159590_c0_seq1.mrna7
Chr1	stalkie_big_nohaplotig	mRNA	142043733	142045143	.	+	.	ID=comp159590_c0_seq1.mrna7;geneID=comp159590_c0_seq1.path7;Name=comp159590_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1406;mismatches=5;indels=0;unknowns=0;Target=comp159590_c0_seq1 1411 1 .;CDS_Target=comp159590_c0_seq1 1036 788 .;locus=RLOC_00011917
Chr1	stalkie_big_nohaplotig	exon	142043733	142045143	99	+	.	Parent=comp159590_c0_seq1.mrna7
Chr1	stalkie_big_nohaplotig	CDS	142044520	142044768	.	+	0	Parent=comp159590_c0_seq1.mrna7
Chr1	stalkie_big_nohaplotig	mRNA	142055078	142055639	.	-	.	ID=comp153522_c0_seq1.mrna1;geneID=comp153522_c0_seq1.path1;Name=comp153522_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=549;mismatches=12;indels=1;unknowns=0;Target=comp153522_c0_seq1 561 1 .;CDS_Target=comp153522_c0_seq1 107 3 .;locus=RLOC_00011918
Chr1	stalkie_big_nohaplotig	exon	142055078	142055639	97	-	.	Parent=comp153522_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142055533	142055637	.	-	0	Parent=comp153522_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142060692	142063688	.	+	.	ID=comp156080_c0_seq1.mrna1;geneID=comp156080_c0_seq1.path1;Name=comp156080_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=2248;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011918
Chr1	stalkie_big_nohaplotig	exon	142060692	142060713	100	+	.	Parent=comp156080_c0_seq1.mrna1;Target=comp156080_c0_seq1 22 1 .
Chr1	stalkie_big_nohaplotig	exon	142061278	142061760	100	+	.	Parent=comp156080_c0_seq1.mrna1;Target=comp156080_c0_seq1 505 23 .
Chr1	stalkie_big_nohaplotig	exon	142061817	142062327	100	+	.	Parent=comp156080_c0_seq1.mrna1;Target=comp156080_c0_seq1 1016 506 .
Chr1	stalkie_big_nohaplotig	exon	142062381	142062869	99	+	.	Parent=comp156080_c0_seq1.mrna1;Target=comp156080_c0_seq1 1505 1017 .
Chr1	stalkie_big_nohaplotig	exon	142062941	142063688	99	+	.	Parent=comp156080_c0_seq1.mrna1;Target=comp156080_c0_seq1 2253 1506 .
Chr1	stalkie_big_nohaplotig	CDS	142062402	142062869	.	+	0	Parent=comp156080_c0_seq1.mrna1;Target=comp156080_c0_seq1 1505 1038 .
Chr1	stalkie_big_nohaplotig	CDS	142062941	142063354	.	+	0	Parent=comp156080_c0_seq1.mrna1;Target=comp156080_c0_seq1 1919 1506 .
Chr1	stalkie_big_nohaplotig	mRNA	142061496	142063351	.	+	.	ID=FBgn0030768.1.mrna1;geneID=FBgn0030768.1.path1;Name=FBgn0030768.1;Dir=sensecoverage=100.0;identity=99.8;matches=1658;mismatches=4;indels=0;unknowns=0;locus=RLOC_00011918
Chr1	stalkie_big_nohaplotig	exon	142061496	142061760	100	+	.	Parent=FBgn0030768.1.mrna1;Target=FBgn0030768.1 1 265 +
Chr1	stalkie_big_nohaplotig	exon	142061817	142062327	100	+	.	Parent=FBgn0030768.1.mrna1;Target=FBgn0030768.1 266 776 +
Chr1	stalkie_big_nohaplotig	exon	142062395	142062869	99	+	.	Parent=FBgn0030768.1.mrna1;Target=FBgn0030768.1 777 1251 +
Chr1	stalkie_big_nohaplotig	exon	142062941	142063351	99	+	.	Parent=FBgn0030768.1.mrna1;Target=FBgn0030768.1 1252 1662 +
Chr1	stalkie_big_nohaplotig	CDS	142061496	142061760	.	+	0	Parent=FBgn0030768.1.mrna1;Target=FBgn0030768.1 1 265 +
Chr1	stalkie_big_nohaplotig	CDS	142061817	142062327	.	+	2	Parent=FBgn0030768.1.mrna1;Target=FBgn0030768.1 266 776 +
Chr1	stalkie_big_nohaplotig	CDS	142062395	142062869	.	+	1	Parent=FBgn0030768.1.mrna1;Target=FBgn0030768.1 777 1251 +
Chr1	stalkie_big_nohaplotig	CDS	142062941	142063351	.	+	0	Parent=FBgn0030768.1.mrna1;Target=FBgn0030768.1 1252 1662 +
Chr1	gffcl	locus	142058121	142060759	.	-	.	ID=RLOC_00011919;geneIDs=FBgn0030630.1.path1;transcripts=FBgn0030630.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142058121	142060759	.	-	.	ID=FBgn0030630.1.mrna1;geneID=FBgn0030630.1.path1;Name=FBgn0030630.1;Dir=sensecoverage=100.0;identity=98.1;matches=1462;mismatches=23;indels=6;unknowns=0;locus=RLOC_00011919
Chr1	stalkie_big_nohaplotig	exon	142058121	142058772	96	-	.	Parent=FBgn0030630.1.mrna1;Target=FBgn0030630.1 834 1491 +
Chr1	stalkie_big_nohaplotig	exon	142058830	142058906	98	-	.	Parent=FBgn0030630.1.mrna1;Target=FBgn0030630.1 757 833 +
Chr1	stalkie_big_nohaplotig	exon	142059874	142060389	99	-	.	Parent=FBgn0030630.1.mrna1;Target=FBgn0030630.1 241 756 +
Chr1	stalkie_big_nohaplotig	exon	142060446	142060595	100	-	.	Parent=FBgn0030630.1.mrna1;Target=FBgn0030630.1 91 240 +
Chr1	stalkie_big_nohaplotig	exon	142060670	142060759	100	-	.	Parent=FBgn0030630.1.mrna1;Target=FBgn0030630.1 1 90 +
Chr1	stalkie_big_nohaplotig	CDS	142058121	142058772	.	-	1	Parent=FBgn0030630.1.mrna1;Target=FBgn0030630.1 834 1491 +
Chr1	stalkie_big_nohaplotig	CDS	142058830	142058906	.	-	0	Parent=FBgn0030630.1.mrna1;Target=FBgn0030630.1 757 833 +
Chr1	stalkie_big_nohaplotig	CDS	142059874	142060389	.	-	0	Parent=FBgn0030630.1.mrna1;Target=FBgn0030630.1 241 756 +
Chr1	stalkie_big_nohaplotig	CDS	142060446	142060595	.	-	0	Parent=FBgn0030630.1.mrna1;Target=FBgn0030630.1 91 240 +
Chr1	stalkie_big_nohaplotig	CDS	142060670	142060759	.	-	0	Parent=FBgn0030630.1.mrna1;Target=FBgn0030630.1 1 90 +
Chr1	gffcl	locus	142064083	142064802	.	-	.	ID=RLOC_00011920;geneIDs=comp157481_c0_seq1.path1;transcripts=comp157481_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142064083	142064802	.	-	.	ID=comp157481_c0_seq1.mrna1;geneID=comp157481_c0_seq1.path1;Name=comp157481_c0_seq1;Dir=indeterminatecoverage=99.5;identity=98.9;matches=716;mismatches=4;indels=4;unknowns=0;Target=comp157481_c0_seq1 728 5 .;CDS_Target=comp157481_c0_seq1 88 5 .;locus=RLOC_00011920
Chr1	stalkie_big_nohaplotig	exon	142064083	142064802	98	-	.	Parent=comp157481_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142064719	142064802	.	-	0	Parent=comp157481_c0_seq1.mrna1
Chr1	gffcl	locus	142064918	142065491	.	-	.	ID=RLOC_00011921;geneIDs=comp154361_c0_seq1.path1;transcripts=comp154361_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142064918	142065491	.	-	.	ID=comp154361_c0_seq1.mrna1;geneID=comp154361_c0_seq1.path1;Name=comp154361_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.1;matches=570;mismatches=4;indels=1;unknowns=0;Target=comp154361_c0_seq1 576 2 .;CDS_Target=comp154361_c0_seq1 79 2 .;locus=RLOC_00011921
Chr1	stalkie_big_nohaplotig	exon	142064918	142065491	99	-	.	Parent=comp154361_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142065414	142065491	.	-	0	Parent=comp154361_c0_seq1.mrna1
Chr1	gffcl	locus	142066682	142067175	.	+	.	ID=RLOC_00011922;geneIDs=comp147162_c2_seq1.path1;transcripts=comp147162_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142066682	142067175	.	+	.	ID=comp147162_c2_seq1.mrna1;geneID=comp147162_c2_seq1.path1;Name=comp147162_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=490;mismatches=4;indels=0;unknowns=0;Target=comp147162_c2_seq1 494 1 .;CDS_Target=comp147162_c2_seq1 383 204 .;locus=RLOC_00011922
Chr1	stalkie_big_nohaplotig	exon	142066682	142067175	99	+	.	Parent=comp147162_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142066885	142067064	.	+	0	Parent=comp147162_c2_seq1.mrna1
Chr1	gffcl	locus	142067295	142068697	.	+	.	ID=RLOC_00011923;geneIDs=comp143430_c0_seq1.path1,comp403979_c0_seq1.path1;transcripts=comp143430_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142067295	142068059	.	+	.	ID=comp143430_c0_seq1.mrna1;geneID=comp143430_c0_seq1.path1;Name=comp143430_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.7;matches=763;mismatches=2;indels=0;unknowns=0;Target=comp143430_c0_seq1 768 4 .;CDS_Target=comp143430_c0_seq1 347 246 .;locus=RLOC_00011923
Chr1	stalkie_big_nohaplotig	exon	142067295	142068059	99	+	.	Parent=comp143430_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142067537	142067638	.	+	0	Parent=comp143430_c0_seq1.mrna1
Chr1	gffcl	locus	142068951	142070846	.	-	.	ID=RLOC_00011924;geneIDs=FBgn0052677.path1;transcripts=FBgn0052677.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142068951	142070846	.	-	.	ID=FBgn0052677.mrna1;geneID=FBgn0052677.path1;Name=FBgn0052677;Dir=sensecoverage=100.0;identity=99.9;matches=695;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011924
Chr1	stalkie_big_nohaplotig	exon	142068951	142069019	100	-	.	Parent=FBgn0052677.mrna1;Target=FBgn0052677 628 696 +
Chr1	stalkie_big_nohaplotig	exon	142070157	142070297	100	-	.	Parent=FBgn0052677.mrna1;Target=FBgn0052677 487 627 +
Chr1	stalkie_big_nohaplotig	exon	142070361	142070846	99	-	.	Parent=FBgn0052677.mrna1;Target=FBgn0052677 1 486 +
Chr1	stalkie_big_nohaplotig	CDS	142068951	142069019	.	-	0	Parent=FBgn0052677.mrna1;Target=FBgn0052677 628 696 +
Chr1	stalkie_big_nohaplotig	CDS	142070157	142070297	.	-	0	Parent=FBgn0052677.mrna1;Target=FBgn0052677 487 627 +
Chr1	stalkie_big_nohaplotig	CDS	142070361	142070846	.	-	0	Parent=FBgn0052677.mrna1;Target=FBgn0052677 1 486 +
Chr1	gffcl	locus	142082677	142083825	.	-	.	ID=RLOC_00011925;geneIDs=ORF1304.path1;transcripts=ORF1304.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142082677	142083825	.	-	.	ID=ORF1304.mrna1;geneID=ORF1304.path1;Name=ORF1304;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1138;mismatches=8;indels=3;unknowns=0;Target=ORF1304 1146 1 .;locus=RLOC_00011925
Chr1	stalkie_big_nohaplotig	exon	142082677	142083825	99	-	.	Parent=ORF1304.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142082677	142083825	.	-	0	Parent=ORF1304.mrna1
Chr1	gffcl	locus	142176549	142178137	.	-	.	ID=RLOC_00011926;geneIDs=comp157047_c0_seq1.path1;transcripts=comp157047_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142176549	142178137	.	-	.	ID=comp157047_c0_seq1.mrna1;geneID=comp157047_c0_seq1.path1;Name=comp157047_c0_seq1;Dir=sensecoverage=97.7;identity=98.2;matches=764;mismatches=13;indels=1;unknowns=0;Target=comp157047_c0_seq1 253 597 +;locus=RLOC_00011926
Chr1	stalkie_big_nohaplotig	exon	142176549	142177142	98	-	.	Parent=comp157047_c0_seq1.mrna1;Target=comp157047_c0_seq1 202 795 +
Chr1	stalkie_big_nohaplotig	exon	142177206	142177319	95	-	.	Parent=comp157047_c0_seq1.mrna1;Target=comp157047_c0_seq1 87 201 +
Chr1	stalkie_big_nohaplotig	exon	142178069	142178137	100	-	.	Parent=comp157047_c0_seq1.mrna1;Target=comp157047_c0_seq1 18 86 +
Chr1	stalkie_big_nohaplotig	CDS	142176747	142177091	.	-	0	Parent=comp157047_c0_seq1.mrna1
Chr1	gffcl	locus	142258202	142274240	.	+	.	ID=RLOC_00011927;geneIDs=FBgn0263072.1.path1;transcripts=FBgn0263072.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142258202	142274240	.	+	.	ID=FBgn0263072.1.mrna1;geneID=FBgn0263072.1.path1;Name=FBgn0263072.1;Dir=sensecoverage=99.8;identity=99.6;matches=5243;mismatches=23;indels=0;unknowns=0;locus=RLOC_00011927
Chr1	stalkie_big_nohaplotig	exon	142258202	142258321	98	+	.	Parent=FBgn0263072.1.mrna1;Target=FBgn0263072.1 9 128 +
Chr1	stalkie_big_nohaplotig	exon	142266801	142268149	99	+	.	Parent=FBgn0263072.1.mrna1;Target=FBgn0263072.1 129 1477 +
Chr1	stalkie_big_nohaplotig	exon	142268249	142268605	99	+	.	Parent=FBgn0263072.1.mrna1;Target=FBgn0263072.1 1478 1834 +
Chr1	stalkie_big_nohaplotig	exon	142270536	142270737	100	+	.	Parent=FBgn0263072.1.mrna1;Target=FBgn0263072.1 1835 2036 +
Chr1	stalkie_big_nohaplotig	exon	142270803	142270966	100	+	.	Parent=FBgn0263072.1.mrna1;Target=FBgn0263072.1 2037 2200 +
Chr1	stalkie_big_nohaplotig	exon	142271020	142272344	99	+	.	Parent=FBgn0263072.1.mrna1;Target=FBgn0263072.1 2201 3525 +
Chr1	stalkie_big_nohaplotig	exon	142272407	142273152	100	+	.	Parent=FBgn0263072.1.mrna1;Target=FBgn0263072.1 3526 4271 +
Chr1	stalkie_big_nohaplotig	exon	142273238	142274240	99	+	.	Parent=FBgn0263072.1.mrna1;Target=FBgn0263072.1 4272 5274 +
Chr1	stalkie_big_nohaplotig	CDS	142258203	142258321	.	+	0	Parent=FBgn0263072.1.mrna1;Target=FBgn0263072.1 10 128 +
Chr1	stalkie_big_nohaplotig	CDS	142266801	142268149	.	+	1	Parent=FBgn0263072.1.mrna1;Target=FBgn0263072.1 129 1477 +
Chr1	stalkie_big_nohaplotig	CDS	142268249	142268605	.	+	2	Parent=FBgn0263072.1.mrna1;Target=FBgn0263072.1 1478 1834 +
Chr1	stalkie_big_nohaplotig	CDS	142270536	142270737	.	+	2	Parent=FBgn0263072.1.mrna1;Target=FBgn0263072.1 1835 2036 +
Chr1	stalkie_big_nohaplotig	CDS	142270803	142270966	.	+	1	Parent=FBgn0263072.1.mrna1;Target=FBgn0263072.1 2037 2200 +
Chr1	stalkie_big_nohaplotig	CDS	142271020	142272344	.	+	2	Parent=FBgn0263072.1.mrna1;Target=FBgn0263072.1 2201 3525 +
Chr1	stalkie_big_nohaplotig	CDS	142272407	142273152	.	+	0	Parent=FBgn0263072.1.mrna1;Target=FBgn0263072.1 3526 4271 +
Chr1	stalkie_big_nohaplotig	CDS	142273238	142274240	.	+	1	Parent=FBgn0263072.1.mrna1;Target=FBgn0263072.1 4272 5274 +
Chr1	gffcl	locus	142276210	142276944	.	+	.	ID=RLOC_00011928;geneIDs=comp150939_c0_seq1.path1;transcripts=comp150939_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142276210	142276944	.	+	.	ID=comp150939_c0_seq1.mrna1;geneID=comp150939_c0_seq1.path1;Name=comp150939_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.5;matches=731;mismatches=0;indels=4;unknowns=0;Target=comp150939_c0_seq1 738 8 .;CDS_Target=comp150939_c0_seq1 136 8 .;locus=RLOC_00011928
Chr1	stalkie_big_nohaplotig	exon	142276210	142276944	99	+	.	Parent=comp150939_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142276210	142276338	.	+	0	Parent=comp150939_c0_seq1.mrna1
Chr1	gffcl	locus	142278993	142280640	.	+	.	ID=RLOC_00011929;geneIDs=FBgn0030218.1.path1;transcripts=FBgn0030218.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142278993	142280640	.	+	.	ID=FBgn0030218.1.mrna1;geneID=FBgn0030218.1.path1;Name=FBgn0030218.1;Dir=sensecoverage=100.0;identity=99.8;matches=934;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011929
Chr1	stalkie_big_nohaplotig	exon	142278993	142279080	98	+	.	Parent=FBgn0030218.1.mrna1;Target=FBgn0030218.1 1 88 +
Chr1	stalkie_big_nohaplotig	exon	142279433	142279797	99	+	.	Parent=FBgn0030218.1.mrna1;Target=FBgn0030218.1 89 453 +
Chr1	stalkie_big_nohaplotig	exon	142279877	142279964	100	+	.	Parent=FBgn0030218.1.mrna1;Target=FBgn0030218.1 454 541 +
Chr1	stalkie_big_nohaplotig	exon	142280177	142280282	100	+	.	Parent=FBgn0030218.1.mrna1;Target=FBgn0030218.1 542 647 +
Chr1	stalkie_big_nohaplotig	exon	142280352	142280640	100	+	.	Parent=FBgn0030218.1.mrna1;Target=FBgn0030218.1 648 936 +
Chr1	stalkie_big_nohaplotig	CDS	142278993	142279080	.	+	0	Parent=FBgn0030218.1.mrna1;Target=FBgn0030218.1 1 88 +
Chr1	stalkie_big_nohaplotig	CDS	142279433	142279797	.	+	2	Parent=FBgn0030218.1.mrna1;Target=FBgn0030218.1 89 453 +
Chr1	stalkie_big_nohaplotig	CDS	142279877	142279964	.	+	0	Parent=FBgn0030218.1.mrna1;Target=FBgn0030218.1 454 541 +
Chr1	stalkie_big_nohaplotig	CDS	142280177	142280282	.	+	2	Parent=FBgn0030218.1.mrna1;Target=FBgn0030218.1 542 647 +
Chr1	stalkie_big_nohaplotig	CDS	142280352	142280640	.	+	1	Parent=FBgn0030218.1.mrna1;Target=FBgn0030218.1 648 936 +
Chr1	gffcl	locus	142280696	142283174	.	-	.	ID=RLOC_00011930;geneIDs=FBgn0030217.1.path1;transcripts=FBgn0030217.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142280696	142283174	.	-	.	ID=FBgn0030217.1.mrna1;geneID=FBgn0030217.1.path1;Name=FBgn0030217.1;Dir=sensecoverage=100.0;identity=99.1;matches=2033;mismatches=18;indels=0;unknowns=0;locus=RLOC_00011930
Chr1	stalkie_big_nohaplotig	exon	142280696	142280782	100	-	.	Parent=FBgn0030217.1.mrna1;Target=FBgn0030217.1 1966 2052 +
Chr1	stalkie_big_nohaplotig	exon	142280852	142281024	100	-	.	Parent=FBgn0030217.1.mrna1;Target=FBgn0030217.1 1793 1965 +
Chr1	stalkie_big_nohaplotig	exon	142281384	142283174	98	-	.	Parent=FBgn0030217.1.mrna1;Target=FBgn0030217.1 2 1792 +
Chr1	stalkie_big_nohaplotig	CDS	142280696	142280782	.	-	0	Parent=FBgn0030217.1.mrna1;Target=FBgn0030217.1 1966 2052 +
Chr1	stalkie_big_nohaplotig	CDS	142280852	142281024	.	-	2	Parent=FBgn0030217.1.mrna1;Target=FBgn0030217.1 1793 1965 +
Chr1	stalkie_big_nohaplotig	CDS	142281384	142283172	.	-	0	Parent=FBgn0030217.1.mrna1;Target=FBgn0030217.1 4 1792 +
Chr1	gffcl	locus	142305423	142308306	.	+	.	ID=RLOC_00011931;geneIDs=FBgn0001206.path1;transcripts=FBgn0001206.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142305423	142308306	.	+	.	ID=FBgn0001206.mrna1;geneID=FBgn0001206.path1;Name=FBgn0001206;Dir=sensecoverage=100.0;identity=98.9;matches=2237;mismatches=25;indels=0;unknowns=0;locus=RLOC_00011931
Chr1	stalkie_big_nohaplotig	exon	142305423	142306365	98	+	.	Parent=FBgn0001206.mrna1;Target=FBgn0001206 1 943 +
Chr1	stalkie_big_nohaplotig	exon	142306437	142306592	98	+	.	Parent=FBgn0001206.mrna1;Target=FBgn0001206 944 1099 +
Chr1	stalkie_big_nohaplotig	exon	142306828	142307007	100	+	.	Parent=FBgn0001206.mrna1;Target=FBgn0001206 1100 1279 +
Chr1	stalkie_big_nohaplotig	exon	142307194	142307619	98	+	.	Parent=FBgn0001206.mrna1;Target=FBgn0001206 1280 1705 +
Chr1	stalkie_big_nohaplotig	exon	142307684	142307875	98	+	.	Parent=FBgn0001206.mrna1;Target=FBgn0001206 1706 1897 +
Chr1	stalkie_big_nohaplotig	exon	142307942	142308306	99	+	.	Parent=FBgn0001206.mrna1;Target=FBgn0001206 1898 2262 +
Chr1	stalkie_big_nohaplotig	CDS	142305423	142306365	.	+	0	Parent=FBgn0001206.mrna1;Target=FBgn0001206 1 943 +
Chr1	stalkie_big_nohaplotig	CDS	142306437	142306592	.	+	2	Parent=FBgn0001206.mrna1;Target=FBgn0001206 944 1099 +
Chr1	stalkie_big_nohaplotig	CDS	142306828	142307007	.	+	2	Parent=FBgn0001206.mrna1;Target=FBgn0001206 1100 1279 +
Chr1	stalkie_big_nohaplotig	CDS	142307194	142307619	.	+	2	Parent=FBgn0001206.mrna1;Target=FBgn0001206 1280 1705 +
Chr1	stalkie_big_nohaplotig	CDS	142307684	142307875	.	+	2	Parent=FBgn0001206.mrna1;Target=FBgn0001206 1706 1897 +
Chr1	stalkie_big_nohaplotig	CDS	142307942	142308306	.	+	2	Parent=FBgn0001206.mrna1;Target=FBgn0001206 1898 2262 +
Chr1	gffcl	locus	142440886	142441285	.	+	.	ID=RLOC_00011932;geneIDs=comp118153_c0_seq1.path1;transcripts=comp118153_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142440886	142441285	.	+	.	ID=comp118153_c0_seq1.mrna1;geneID=comp118153_c0_seq1.path1;Name=comp118153_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=397;mismatches=3;indels=0;unknowns=0;Target=comp118153_c0_seq1 400 1 .;CDS_Target=comp118153_c0_seq1 84 1 .;locus=RLOC_00011932
Chr1	stalkie_big_nohaplotig	exon	142440886	142441285	99	+	.	Parent=comp118153_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142440886	142440969	.	+	0	Parent=comp118153_c0_seq1.mrna1
Chr1	gffcl	locus	142469271	142473887	.	+	.	ID=RLOC_00011933;geneIDs=FBgn0003053.1.path1;transcripts=FBgn0003053.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142469271	142473887	.	+	.	ID=FBgn0003053.1.mrna1;geneID=FBgn0003053.1.path1;Name=FBgn0003053.1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=4574;mismatches=37;indels=6;unknowns=0;Target=FBgn0003053.1 4611 1 .;locus=RLOC_00011933
Chr1	stalkie_big_nohaplotig	exon	142469271	142473887	99	+	.	Parent=FBgn0003053.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142469271	142473887	.	+	0	Parent=FBgn0003053.1.mrna1
Chr1	gffcl	locus	142480619	142482180	.	-	.	ID=RLOC_00011934;geneIDs=FBgn0030638.2.path1;transcripts=FBgn0030638.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142480619	142482180	.	-	.	ID=FBgn0030638.2.mrna1;geneID=FBgn0030638.2.path1;Name=FBgn0030638.2;Dir=sensecoverage=100.0;identity=99.6;matches=1497;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011934
Chr1	stalkie_big_nohaplotig	exon	142480619	142481023	99	-	.	Parent=FBgn0030638.2.mrna1;Target=FBgn0030638.2 1099 1503 +
Chr1	stalkie_big_nohaplotig	exon	142481083	142482180	99	-	.	Parent=FBgn0030638.2.mrna1;Target=FBgn0030638.2 1 1098 +
Chr1	stalkie_big_nohaplotig	CDS	142480619	142481023	.	-	0	Parent=FBgn0030638.2.mrna1;Target=FBgn0030638.2 1099 1503 +
Chr1	stalkie_big_nohaplotig	CDS	142481083	142482180	.	-	0	Parent=FBgn0030638.2.mrna1;Target=FBgn0030638.2 1 1098 +
Chr1	gffcl	locus	142485888	142503125	.	+	.	ID=RLOC_00011935;geneIDs=FBgn0014092.1.path1;transcripts=FBgn0014092.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142485888	142503125	.	+	.	ID=FBgn0014092.1.mrna1;geneID=FBgn0014092.1.path1;Name=FBgn0014092.1;Dir=sensecoverage=100.0;identity=98.9;matches=872;mismatches=10;indels=0;unknowns=0;locus=RLOC_00011935
Chr1	stalkie_big_nohaplotig	exon	142485888	142486087	98	+	.	Parent=FBgn0014092.1.mrna1;Target=FBgn0014092.1 1 200 +
Chr1	stalkie_big_nohaplotig	exon	142486146	142486277	98	+	.	Parent=FBgn0014092.1.mrna1;Target=FBgn0014092.1 201 332 +
Chr1	stalkie_big_nohaplotig	exon	142486347	142486491	98	+	.	Parent=FBgn0014092.1.mrna1;Target=FBgn0014092.1 333 477 +
Chr1	stalkie_big_nohaplotig	exon	142502721	142503125	99	+	.	Parent=FBgn0014092.1.mrna1;Target=FBgn0014092.1 478 882 +
Chr1	stalkie_big_nohaplotig	CDS	142485888	142486087	.	+	0	Parent=FBgn0014092.1.mrna1;Target=FBgn0014092.1 1 200 +
Chr1	stalkie_big_nohaplotig	CDS	142486146	142486277	.	+	1	Parent=FBgn0014092.1.mrna1;Target=FBgn0014092.1 201 332 +
Chr1	stalkie_big_nohaplotig	CDS	142486347	142486491	.	+	1	Parent=FBgn0014092.1.mrna1;Target=FBgn0014092.1 333 477 +
Chr1	stalkie_big_nohaplotig	CDS	142502721	142503125	.	+	0	Parent=FBgn0014092.1.mrna1;Target=FBgn0014092.1 478 882 +
Chr1	gffcl	locus	142497828	142500549	.	-	.	ID=RLOC_00011936;geneIDs=FBgn0030756.1.path1;transcripts=FBgn0030756.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142497828	142500549	.	-	.	ID=FBgn0030756.1.mrna1;geneID=FBgn0030756.1.path1;Name=FBgn0030756.1;Dir=sensecoverage=100.0;identity=99.3;matches=1465;mismatches=11;indels=0;unknowns=0;locus=RLOC_00011936
Chr1	stalkie_big_nohaplotig	exon	142497828	142498145	100	-	.	Parent=FBgn0030756.1.mrna1;Target=FBgn0030756.1 1159 1476 +
Chr1	stalkie_big_nohaplotig	exon	142499392	142500549	99	-	.	Parent=FBgn0030756.1.mrna1;Target=FBgn0030756.1 1 1158 +
Chr1	stalkie_big_nohaplotig	CDS	142497828	142498145	.	-	0	Parent=FBgn0030756.1.mrna1;Target=FBgn0030756.1 1159 1476 +
Chr1	stalkie_big_nohaplotig	CDS	142499392	142500549	.	-	0	Parent=FBgn0030756.1.mrna1;Target=FBgn0030756.1 1 1158 +
Chr1	gffcl	locus	142504063	142505565	.	-	.	ID=RLOC_00011937;geneIDs=FBgn0011742.1.path1;transcripts=FBgn0011742.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142504063	142505565	.	-	.	ID=FBgn0011742.1.mrna1;geneID=FBgn0011742.1.path1;Name=FBgn0011742.1;Dir=sensecoverage=100.0;identity=99.8;matches=976;mismatches=1;indels=1;unknowns=0;Target=FBgn0011742.1 3 149 +;locus=RLOC_00011937
Chr1	stalkie_big_nohaplotig	exon	142504063	142504230	100	-	.	Parent=FBgn0011742.1.mrna1;Target=FBgn0011742.1 811 978 +
Chr1	stalkie_big_nohaplotig	exon	142504552	142504830	99	-	.	Parent=FBgn0011742.1.mrna1;Target=FBgn0011742.1 532 810 +
Chr1	stalkie_big_nohaplotig	exon	142504904	142505053	100	-	.	Parent=FBgn0011742.1.mrna1;Target=FBgn0011742.1 382 531 +
Chr1	stalkie_big_nohaplotig	exon	142505115	142505324	100	-	.	Parent=FBgn0011742.1.mrna1;Target=FBgn0011742.1 172 381 +
Chr1	stalkie_big_nohaplotig	exon	142505396	142505565	99	-	.	Parent=FBgn0011742.1.mrna1;Target=FBgn0011742.1 1 171 +
Chr1	stalkie_big_nohaplotig	CDS	142505418	142505563	.	-	0	Parent=FBgn0011742.1.mrna1
Chr1	gffcl	locus	142513357	142513660	.	-	.	ID=RLOC_00011938;geneIDs=comp122130_c0_seq1.path1;transcripts=comp122130_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142513357	142513660	.	-	.	ID=comp122130_c0_seq1.mrna1;geneID=comp122130_c0_seq1.path1;Name=comp122130_c0_seq1;Dir=indeterminatecoverage=97.4;identity=98.7;matches=300;mismatches=4;indels=0;unknowns=0;Target=comp122130_c0_seq1 312 9 .;CDS_Target=comp122130_c0_seq1 245 207 .;locus=RLOC_00011938
Chr1	stalkie_big_nohaplotig	exon	142513357	142513660	98	-	.	Parent=comp122130_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142513424	142513462	.	-	0	Parent=comp122130_c0_seq1.mrna1
Chr1	gffcl	locus	142514414	142516565	.	+	.	ID=RLOC_00011939;geneIDs=comp163433_c0_seq1.path1;transcripts=comp163433_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142514414	142516565	.	+	.	ID=comp163433_c0_seq1.mrna1;geneID=comp163433_c0_seq1.path1;Name=comp163433_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.6;matches=2048;mismatches=58;indels=81;unknowns=0;Target=comp163433_c0_seq1 125 3 .;locus=RLOC_00011939
Chr1	stalkie_big_nohaplotig	exon	142514414	142515817	95	+	.	Parent=comp163433_c0_seq1.mrna1;Target=comp163433_c0_seq1 1382 1 .
Chr1	stalkie_big_nohaplotig	exon	142515838	142516565	90	+	.	Parent=comp163433_c0_seq1.mrna1;Target=comp163433_c0_seq1 2235 1457 .
Chr1	stalkie_big_nohaplotig	CDS	142514416	142514546	.	+	0	Parent=comp163433_c0_seq1.mrna1
Chr1	gffcl	locus	142517278	142517995	.	-	.	ID=RLOC_00011940;geneIDs=comp147056_c0_seq1.path1;transcripts=comp147056_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142517278	142517995	.	-	.	ID=comp147056_c0_seq1.mrna1;geneID=comp147056_c0_seq1.path1;Name=comp147056_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=716;mismatches=2;indels=0;unknowns=0;Target=comp147056_c0_seq1 718 1 .;CDS_Target=comp147056_c0_seq1 479 417 .;locus=RLOC_00011940
Chr1	stalkie_big_nohaplotig	exon	142517278	142517995	99	-	.	Parent=comp147056_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142517517	142517579	.	-	0	Parent=comp147056_c0_seq1.mrna1
Chr1	gffcl	locus	142518736	142519268	.	+	.	ID=RLOC_00011941;geneIDs=comp158563_c1_seq1.path1;transcripts=comp158563_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142518736	142519268	.	+	.	ID=comp158563_c1_seq1.mrna1;geneID=comp158563_c1_seq1.path1;Name=comp158563_c1_seq1;Dir=indeterminatecoverage=99.6;identity=96.8;matches=516;mismatches=6;indels=11;unknowns=0;Target=comp158563_c1_seq1 522 1 .;CDS_Target=comp158563_c1_seq1 360 295 .;locus=RLOC_00011941
Chr1	stalkie_big_nohaplotig	exon	142518736	142519268	96	+	.	Parent=comp158563_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142519039	142519104	.	+	0	Parent=comp158563_c1_seq1.mrna1
Chr1	gffcl	locus	142526460	142528168	.	-	.	ID=RLOC_00011942;geneIDs=FBgn0030758.1.path1;transcripts=FBgn0030758.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142526460	142528168	.	-	.	ID=FBgn0030758.1.mrna1;geneID=FBgn0030758.1.path1;Name=FBgn0030758.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1708;mismatches=1;indels=1;unknowns=0;Target=FBgn0030758.1 1710 1 .;CDS_Target=FBgn0030758.1 236 3 .;locus=RLOC_00011942
Chr1	stalkie_big_nohaplotig	exon	142526460	142528168	99	-	.	Parent=FBgn0030758.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142527934	142528166	.	-	0	Parent=FBgn0030758.1.mrna1
Chr1	gffcl	locus	142543546	142544431	.	-	.	ID=RLOC_00011943;geneIDs=comp143846_c0_seq1.path1;transcripts=comp143846_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142543546	142544431	.	-	.	ID=comp143846_c0_seq1.mrna1;geneID=comp143846_c0_seq1.path1;Name=comp143846_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.2;matches=880;mismatches=6;indels=1;unknowns=0;Target=comp143846_c0_seq1 887 1 .;CDS_Target=comp143846_c0_seq1 117 1 .;locus=RLOC_00011943
Chr1	stalkie_big_nohaplotig	exon	142543546	142544431	99	-	.	Parent=comp143846_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142544315	142544431	.	-	0	Parent=comp143846_c0_seq1.mrna1
Chr1	gffcl	locus	142547068	142548520	.	+	.	ID=RLOC_00011944;geneIDs=FBgn0031183.1.path1;transcripts=FBgn0031183.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142547068	142548520	.	+	.	ID=FBgn0031183.1.mrna1;geneID=FBgn0031183.1.path1;Name=FBgn0031183.1;Dir=sensecoverage=100.0;identity=99.8;matches=1197;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011944
Chr1	stalkie_big_nohaplotig	exon	142547068	142547458	99	+	.	Parent=FBgn0031183.1.mrna1;Target=FBgn0031183.1 1 391 +
Chr1	stalkie_big_nohaplotig	exon	142547526	142547734	100	+	.	Parent=FBgn0031183.1.mrna1;Target=FBgn0031183.1 392 600 +
Chr1	stalkie_big_nohaplotig	exon	142547793	142547918	100	+	.	Parent=FBgn0031183.1.mrna1;Target=FBgn0031183.1 601 726 +
Chr1	stalkie_big_nohaplotig	exon	142547975	142548214	100	+	.	Parent=FBgn0031183.1.mrna1;Target=FBgn0031183.1 727 966 +
Chr1	stalkie_big_nohaplotig	exon	142548287	142548520	99	+	.	Parent=FBgn0031183.1.mrna1;Target=FBgn0031183.1 967 1200 +
Chr1	stalkie_big_nohaplotig	CDS	142547068	142547458	.	+	0	Parent=FBgn0031183.1.mrna1;Target=FBgn0031183.1 1 391 +
Chr1	stalkie_big_nohaplotig	CDS	142547526	142547734	.	+	2	Parent=FBgn0031183.1.mrna1;Target=FBgn0031183.1 392 600 +
Chr1	stalkie_big_nohaplotig	CDS	142547793	142547918	.	+	0	Parent=FBgn0031183.1.mrna1;Target=FBgn0031183.1 601 726 +
Chr1	stalkie_big_nohaplotig	CDS	142547975	142548214	.	+	0	Parent=FBgn0031183.1.mrna1;Target=FBgn0031183.1 727 966 +
Chr1	stalkie_big_nohaplotig	CDS	142548287	142548520	.	+	0	Parent=FBgn0031183.1.mrna1;Target=FBgn0031183.1 967 1200 +
Chr1	gffcl	locus	142550902	142552083	.	-	.	ID=RLOC_00011945;geneIDs=FBgn0031184.1.path1;transcripts=FBgn0031184.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142550902	142552083	.	-	.	ID=FBgn0031184.1.mrna1;geneID=FBgn0031184.1.path1;Name=FBgn0031184.1;Dir=sensecoverage=99.8;identity=98.9;matches=929;mismatches=8;indels=2;unknowns=0;Target=FBgn0031184.1 3 47 +;locus=RLOC_00011945
Chr1	stalkie_big_nohaplotig	exon	142550902	142551104	99	-	.	Parent=FBgn0031184.1.mrna1;Target=FBgn0031184.1 735 937 +
Chr1	stalkie_big_nohaplotig	exon	142551167	142551364	99	-	.	Parent=FBgn0031184.1.mrna1;Target=FBgn0031184.1 537 734 +
Chr1	stalkie_big_nohaplotig	exon	142551416	142551651	100	-	.	Parent=FBgn0031184.1.mrna1;Target=FBgn0031184.1 301 536 +
Chr1	stalkie_big_nohaplotig	exon	142551782	142552083	97	-	.	Parent=FBgn0031184.1.mrna1;Target=FBgn0031184.1 1 300 +
Chr1	stalkie_big_nohaplotig	CDS	142552035	142552081	.	-	0	Parent=FBgn0031184.1.mrna1
Chr1	gffcl	locus	142554838	142558954	.	+	.	ID=RLOC_00011946;geneIDs=FBgn0014395.1.path1;transcripts=FBgn0014395.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142554838	142558954	.	+	.	ID=FBgn0014395.1.mrna1;geneID=FBgn0014395.1.path1;Name=FBgn0014395.1;Dir=sensecoverage=100.0;identity=99.2;matches=1167;mismatches=9;indels=0;unknowns=0;locus=RLOC_00011946
Chr1	stalkie_big_nohaplotig	exon	142554838	142555703	99	+	.	Parent=FBgn0014395.1.mrna1;Target=FBgn0014395.1 1 866 +
Chr1	stalkie_big_nohaplotig	exon	142555762	142555967	98	+	.	Parent=FBgn0014395.1.mrna1;Target=FBgn0014395.1 867 1072 +
Chr1	stalkie_big_nohaplotig	exon	142557096	142557126	96	+	.	Parent=FBgn0014395.1.mrna1;Target=FBgn0014395.1 1073 1103 +
Chr1	stalkie_big_nohaplotig	exon	142558882	142558954	100	+	.	Parent=FBgn0014395.1.mrna1;Target=FBgn0014395.1 1104 1176 +
Chr1	stalkie_big_nohaplotig	CDS	142554838	142555703	.	+	0	Parent=FBgn0014395.1.mrna1;Target=FBgn0014395.1 1 866 +
Chr1	stalkie_big_nohaplotig	CDS	142555762	142555967	.	+	1	Parent=FBgn0014395.1.mrna1;Target=FBgn0014395.1 867 1072 +
Chr1	stalkie_big_nohaplotig	CDS	142557096	142557126	.	+	2	Parent=FBgn0014395.1.mrna1;Target=FBgn0014395.1 1073 1103 +
Chr1	stalkie_big_nohaplotig	CDS	142558882	142558954	.	+	1	Parent=FBgn0014395.1.mrna1;Target=FBgn0014395.1 1104 1176 +
Chr1	gffcl	locus	142564607	142565058	.	+	.	ID=RLOC_00011947;geneIDs=comp152254_c0_seq1.path1;transcripts=comp152254_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142564607	142565058	.	+	.	ID=comp152254_c0_seq1.mrna1;geneID=comp152254_c0_seq1.path1;Name=comp152254_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=450;mismatches=2;indels=0;unknowns=0;Target=comp152254_c0_seq1 452 1 .;CDS_Target=comp152254_c0_seq1 388 296 .;locus=RLOC_00011947
Chr1	stalkie_big_nohaplotig	exon	142564607	142565058	99	+	.	Parent=comp152254_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142564902	142564994	.	+	0	Parent=comp152254_c0_seq1.mrna1
Chr1	gffcl	locus	142567851	142571735	.	-	.	ID=RLOC_00011948;geneIDs=FBgn0031186.1.path1;transcripts=FBgn0031186.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142567851	142571735	.	-	.	ID=FBgn0031186.1.mrna1;geneID=FBgn0031186.1.path1;Name=FBgn0031186.1;Dir=sensecoverage=100.0;identity=100.0;matches=1092;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011948
Chr1	stalkie_big_nohaplotig	exon	142567851	142568046	100	-	.	Parent=FBgn0031186.1.mrna1;Target=FBgn0031186.1 897 1092 +
Chr1	stalkie_big_nohaplotig	exon	142569323	142569504	100	-	.	Parent=FBgn0031186.1.mrna1;Target=FBgn0031186.1 715 896 +
Chr1	stalkie_big_nohaplotig	exon	142569571	142569944	100	-	.	Parent=FBgn0031186.1.mrna1;Target=FBgn0031186.1 341 714 +
Chr1	stalkie_big_nohaplotig	exon	142570278	142570363	100	-	.	Parent=FBgn0031186.1.mrna1;Target=FBgn0031186.1 255 340 +
Chr1	stalkie_big_nohaplotig	exon	142570436	142570628	100	-	.	Parent=FBgn0031186.1.mrna1;Target=FBgn0031186.1 62 254 +
Chr1	stalkie_big_nohaplotig	exon	142571675	142571735	100	-	.	Parent=FBgn0031186.1.mrna1;Target=FBgn0031186.1 1 61 +
Chr1	stalkie_big_nohaplotig	CDS	142567851	142568046	.	-	1	Parent=FBgn0031186.1.mrna1;Target=FBgn0031186.1 897 1092 +
Chr1	stalkie_big_nohaplotig	CDS	142569323	142569504	.	-	0	Parent=FBgn0031186.1.mrna1;Target=FBgn0031186.1 715 896 +
Chr1	stalkie_big_nohaplotig	CDS	142569571	142569944	.	-	2	Parent=FBgn0031186.1.mrna1;Target=FBgn0031186.1 341 714 +
Chr1	stalkie_big_nohaplotig	CDS	142570278	142570363	.	-	1	Parent=FBgn0031186.1.mrna1;Target=FBgn0031186.1 255 340 +
Chr1	stalkie_big_nohaplotig	CDS	142570436	142570628	.	-	2	Parent=FBgn0031186.1.mrna1;Target=FBgn0031186.1 62 254 +
Chr1	stalkie_big_nohaplotig	CDS	142571675	142571735	.	-	0	Parent=FBgn0031186.1.mrna1;Target=FBgn0031186.1 1 61 +
Chr1	gffcl	locus	142573279	142575030	.	-	.	ID=RLOC_00011949;geneIDs=FBgn0037818.1.path1;transcripts=FBgn0037818.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142573279	142575030	.	-	.	ID=FBgn0037818.1.mrna1;geneID=FBgn0037818.1.path1;Name=FBgn0037818.1;Dir=sensecoverage=100.0;identity=99.5;matches=1418;mismatches=7;indels=0;unknowns=0;locus=RLOC_00011949
Chr1	stalkie_big_nohaplotig	exon	142573279	142573660	99	-	.	Parent=FBgn0037818.1.mrna1;Target=FBgn0037818.1 1044 1425 +
Chr1	stalkie_big_nohaplotig	exon	142573723	142573856	100	-	.	Parent=FBgn0037818.1.mrna1;Target=FBgn0037818.1 910 1043 +
Chr1	stalkie_big_nohaplotig	exon	142573923	142574206	100	-	.	Parent=FBgn0037818.1.mrna1;Target=FBgn0037818.1 626 909 +
Chr1	stalkie_big_nohaplotig	exon	142574267	142574413	100	-	.	Parent=FBgn0037818.1.mrna1;Target=FBgn0037818.1 479 625 +
Chr1	stalkie_big_nohaplotig	exon	142574492	142574836	99	-	.	Parent=FBgn0037818.1.mrna1;Target=FBgn0037818.1 134 478 +
Chr1	stalkie_big_nohaplotig	exon	142574898	142575030	99	-	.	Parent=FBgn0037818.1.mrna1;Target=FBgn0037818.1 1 133 +
Chr1	stalkie_big_nohaplotig	CDS	142573279	142573660	.	-	1	Parent=FBgn0037818.1.mrna1;Target=FBgn0037818.1 1044 1425 +
Chr1	stalkie_big_nohaplotig	CDS	142573723	142573856	.	-	0	Parent=FBgn0037818.1.mrna1;Target=FBgn0037818.1 910 1043 +
Chr1	stalkie_big_nohaplotig	CDS	142573923	142574206	.	-	2	Parent=FBgn0037818.1.mrna1;Target=FBgn0037818.1 626 909 +
Chr1	stalkie_big_nohaplotig	CDS	142574267	142574413	.	-	2	Parent=FBgn0037818.1.mrna1;Target=FBgn0037818.1 479 625 +
Chr1	stalkie_big_nohaplotig	CDS	142574492	142574836	.	-	2	Parent=FBgn0037818.1.mrna1;Target=FBgn0037818.1 134 478 +
Chr1	stalkie_big_nohaplotig	CDS	142574898	142575030	.	-	0	Parent=FBgn0037818.1.mrna1;Target=FBgn0037818.1 1 133 +
Chr1	gffcl	locus	142576212	142576899	.	-	.	ID=RLOC_00011950;geneIDs=comp67195_c1_seq1.path1;transcripts=comp67195_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142576212	142576899	.	-	.	ID=comp67195_c1_seq1.mrna1;geneID=comp67195_c1_seq1.path1;Name=comp67195_c1_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=688;mismatches=0;indels=0;unknowns=0;Target=comp67195_c1_seq1 688 1 .;CDS_Target=comp67195_c1_seq1 666 544 .;locus=RLOC_00011950
Chr1	stalkie_big_nohaplotig	exon	142576212	142576899	100	-	.	Parent=comp67195_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142576234	142576356	.	-	0	Parent=comp67195_c1_seq1.mrna1
Chr1	gffcl	locus	142577933	142579835	.	-	.	ID=RLOC_00011951;geneIDs=FBgn0037818.2.path1;transcripts=FBgn0037818.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142577933	142579835	.	-	.	ID=FBgn0037818.2.mrna1;geneID=FBgn0037818.2.path1;Name=FBgn0037818.2;Dir=sensecoverage=100.0;identity=99.6;matches=1342;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011951
Chr1	stalkie_big_nohaplotig	exon	142577933	142578152	99	-	.	Parent=FBgn0037818.2.mrna1;Target=FBgn0037818.2 1128 1347 +
Chr1	stalkie_big_nohaplotig	exon	142578213	142578346	99	-	.	Parent=FBgn0037818.2.mrna1;Target=FBgn0037818.2 994 1127 +
Chr1	stalkie_big_nohaplotig	exon	142578632	142578915	99	-	.	Parent=FBgn0037818.2.mrna1;Target=FBgn0037818.2 710 993 +
Chr1	stalkie_big_nohaplotig	exon	142578975	142579121	100	-	.	Parent=FBgn0037818.2.mrna1;Target=FBgn0037818.2 563 709 +
Chr1	stalkie_big_nohaplotig	exon	142579214	142579558	99	-	.	Parent=FBgn0037818.2.mrna1;Target=FBgn0037818.2 218 562 +
Chr1	stalkie_big_nohaplotig	exon	142579619	142579835	99	-	.	Parent=FBgn0037818.2.mrna1;Target=FBgn0037818.2 1 217 +
Chr1	stalkie_big_nohaplotig	CDS	142577933	142578152	.	-	1	Parent=FBgn0037818.2.mrna1;Target=FBgn0037818.2 1128 1347 +
Chr1	stalkie_big_nohaplotig	CDS	142578213	142578346	.	-	0	Parent=FBgn0037818.2.mrna1;Target=FBgn0037818.2 994 1127 +
Chr1	stalkie_big_nohaplotig	CDS	142578632	142578915	.	-	2	Parent=FBgn0037818.2.mrna1;Target=FBgn0037818.2 710 993 +
Chr1	stalkie_big_nohaplotig	CDS	142578975	142579121	.	-	2	Parent=FBgn0037818.2.mrna1;Target=FBgn0037818.2 563 709 +
Chr1	stalkie_big_nohaplotig	CDS	142579214	142579558	.	-	2	Parent=FBgn0037818.2.mrna1;Target=FBgn0037818.2 218 562 +
Chr1	stalkie_big_nohaplotig	CDS	142579619	142579835	.	-	0	Parent=FBgn0037818.2.mrna1;Target=FBgn0037818.2 1 217 +
Chr1	gffcl	locus	142582755	142586010	.	+	.	ID=RLOC_00011952;geneIDs=FBgn0039049.1.path1;transcripts=FBgn0039049.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142582755	142586010	.	+	.	ID=FBgn0039049.1.mrna1;geneID=FBgn0039049.1.path1;Name=FBgn0039049.1;Dir=sensecoverage=99.8;identity=99.5;matches=1207;mismatches=6;indels=0;unknowns=0;locus=RLOC_00011952
Chr1	stalkie_big_nohaplotig	exon	142582755	142582857	100	+	.	Parent=FBgn0039049.1.mrna1;Target=FBgn0039049.1 1 103 +
Chr1	stalkie_big_nohaplotig	exon	142584509	142584853	98	+	.	Parent=FBgn0039049.1.mrna1;Target=FBgn0039049.1 104 448 +
Chr1	stalkie_big_nohaplotig	exon	142585064	142585210	100	+	.	Parent=FBgn0039049.1.mrna1;Target=FBgn0039049.1 449 595 +
Chr1	stalkie_big_nohaplotig	exon	142585270	142585553	100	+	.	Parent=FBgn0039049.1.mrna1;Target=FBgn0039049.1 596 879 +
Chr1	stalkie_big_nohaplotig	exon	142585611	142585744	100	+	.	Parent=FBgn0039049.1.mrna1;Target=FBgn0039049.1 880 1013 +
Chr1	stalkie_big_nohaplotig	exon	142585811	142586010	99	+	.	Parent=FBgn0039049.1.mrna1;Target=FBgn0039049.1 1014 1213 +
Chr1	stalkie_big_nohaplotig	CDS	142582755	142582857	.	+	0	Parent=FBgn0039049.1.mrna1;Target=FBgn0039049.1 1 103 +
Chr1	stalkie_big_nohaplotig	CDS	142584509	142584853	.	+	2	Parent=FBgn0039049.1.mrna1;Target=FBgn0039049.1 104 448 +
Chr1	stalkie_big_nohaplotig	CDS	142585064	142585210	.	+	2	Parent=FBgn0039049.1.mrna1;Target=FBgn0039049.1 449 595 +
Chr1	stalkie_big_nohaplotig	CDS	142585270	142585553	.	+	2	Parent=FBgn0039049.1.mrna1;Target=FBgn0039049.1 596 879 +
Chr1	stalkie_big_nohaplotig	CDS	142585611	142585744	.	+	0	Parent=FBgn0039049.1.mrna1;Target=FBgn0039049.1 880 1013 +
Chr1	stalkie_big_nohaplotig	CDS	142585811	142586009	.	+	1	Parent=FBgn0039049.1.mrna1;Target=FBgn0039049.1 1014 1212 +
Chr1	gffcl	locus	142586183	142588566	.	-	.	ID=RLOC_00011953;geneIDs=FBgn0260657.path1,FBgn0030992.3.path1;transcripts=FBgn0030992.3.mrna1,FBgn0260657.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142586183	142588483	.	-	.	ID=FBgn0030992.3.mrna1;geneID=FBgn0030992.3.path1;Name=FBgn0030992.3;Dir=sensecoverage=100.0;identity=99.8;matches=817;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011953
Chr1	stalkie_big_nohaplotig	exon	142586183	142586275	100	-	.	Parent=FBgn0030992.3.mrna1;Target=FBgn0030992.3 727 819 +
Chr1	stalkie_big_nohaplotig	exon	142586343	142586508	99	-	.	Parent=FBgn0030992.3.mrna1;Target=FBgn0030992.3 561 726 +
Chr1	stalkie_big_nohaplotig	exon	142586561	142586736	100	-	.	Parent=FBgn0030992.3.mrna1;Target=FBgn0030992.3 385 560 +
Chr1	stalkie_big_nohaplotig	exon	142586810	142586999	100	-	.	Parent=FBgn0030992.3.mrna1;Target=FBgn0030992.3 195 384 +
Chr1	stalkie_big_nohaplotig	exon	142587072	142587222	99	-	.	Parent=FBgn0030992.3.mrna1;Target=FBgn0030992.3 44 194 +
Chr1	stalkie_big_nohaplotig	exon	142588441	142588483	100	-	.	Parent=FBgn0030992.3.mrna1;Target=FBgn0030992.3 1 43 +
Chr1	stalkie_big_nohaplotig	CDS	142586183	142586275	.	-	0	Parent=FBgn0030992.3.mrna1;Target=FBgn0030992.3 727 819 +
Chr1	stalkie_big_nohaplotig	CDS	142586343	142586508	.	-	1	Parent=FBgn0030992.3.mrna1;Target=FBgn0030992.3 561 726 +
Chr1	stalkie_big_nohaplotig	CDS	142586561	142586736	.	-	0	Parent=FBgn0030992.3.mrna1;Target=FBgn0030992.3 385 560 +
Chr1	stalkie_big_nohaplotig	CDS	142586810	142586999	.	-	1	Parent=FBgn0030992.3.mrna1;Target=FBgn0030992.3 195 384 +
Chr1	stalkie_big_nohaplotig	CDS	142587072	142587222	.	-	2	Parent=FBgn0030992.3.mrna1;Target=FBgn0030992.3 44 194 +
Chr1	stalkie_big_nohaplotig	CDS	142588441	142588483	.	-	0	Parent=FBgn0030992.3.mrna1;Target=FBgn0030992.3 1 43 +
Chr1	stalkie_big_nohaplotig	mRNA	142586183	142588566	.	-	.	ID=FBgn0260657.mrna1;geneID=FBgn0260657.path1;Name=FBgn0260657;Dir=sensecoverage=100.0;identity=99.8;matches=560;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011953
Chr1	stalkie_big_nohaplotig	exon	142586183	142586275	100	-	.	Parent=FBgn0260657.mrna1;Target=FBgn0260657 469 561 +
Chr1	stalkie_big_nohaplotig	exon	142586343	142586508	99	-	.	Parent=FBgn0260657.mrna1;Target=FBgn0260657 303 468 +
Chr1	stalkie_big_nohaplotig	exon	142586561	142586736	100	-	.	Parent=FBgn0260657.mrna1;Target=FBgn0260657 127 302 +
Chr1	stalkie_big_nohaplotig	exon	142588441	142588566	100	-	.	Parent=FBgn0260657.mrna1;Target=FBgn0260657 1 126 +
Chr1	stalkie_big_nohaplotig	CDS	142586183	142586275	.	-	0	Parent=FBgn0260657.mrna1;Target=FBgn0260657 469 561 +
Chr1	stalkie_big_nohaplotig	CDS	142586343	142586508	.	-	1	Parent=FBgn0260657.mrna1;Target=FBgn0260657 303 468 +
Chr1	stalkie_big_nohaplotig	CDS	142586561	142586736	.	-	0	Parent=FBgn0260657.mrna1;Target=FBgn0260657 127 302 +
Chr1	stalkie_big_nohaplotig	CDS	142588441	142588566	.	-	0	Parent=FBgn0260657.mrna1;Target=FBgn0260657 1 126 +
Chr1	gffcl	locus	142588757	142591898	.	+	.	ID=RLOC_00011954;geneIDs=FBgn0030992.1.path1;transcripts=FBgn0030992.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142588757	142591898	.	+	.	ID=FBgn0030992.1.mrna1;geneID=FBgn0030992.1.path1;Name=FBgn0030992.1;Dir=sensecoverage=100.0;identity=99.8;matches=844;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011954
Chr1	stalkie_big_nohaplotig	exon	142588757	142588820	100	+	.	Parent=FBgn0030992.1.mrna1;Target=FBgn0030992.1 1 64 +
Chr1	stalkie_big_nohaplotig	exon	142588900	142589050	99	+	.	Parent=FBgn0030992.1.mrna1;Target=FBgn0030992.1 65 215 +
Chr1	stalkie_big_nohaplotig	exon	142590412	142590777	99	+	.	Parent=FBgn0030992.1.mrna1;Target=FBgn0030992.1 216 581 +
Chr1	stalkie_big_nohaplotig	exon	142590831	142590996	100	+	.	Parent=FBgn0030992.1.mrna1;Target=FBgn0030992.1 582 747 +
Chr1	stalkie_big_nohaplotig	exon	142591800	142591898	100	+	.	Parent=FBgn0030992.1.mrna1;Target=FBgn0030992.1 748 846 +
Chr1	stalkie_big_nohaplotig	CDS	142588757	142588820	.	+	0	Parent=FBgn0030992.1.mrna1;Target=FBgn0030992.1 1 64 +
Chr1	stalkie_big_nohaplotig	CDS	142588900	142589050	.	+	2	Parent=FBgn0030992.1.mrna1;Target=FBgn0030992.1 65 215 +
Chr1	stalkie_big_nohaplotig	CDS	142590412	142590777	.	+	1	Parent=FBgn0030992.1.mrna1;Target=FBgn0030992.1 216 581 +
Chr1	stalkie_big_nohaplotig	CDS	142590831	142590996	.	+	1	Parent=FBgn0030992.1.mrna1;Target=FBgn0030992.1 582 747 +
Chr1	stalkie_big_nohaplotig	CDS	142591800	142591898	.	+	0	Parent=FBgn0030992.1.mrna1;Target=FBgn0030992.1 748 846 +
Chr1	gffcl	locus	142592190	142592300	.	-	.	ID=RLOC_00011955;geneIDs=comp163077_c1_seq1.path1;transcripts=comp163077_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142592190	142592300	.	-	.	ID=comp163077_c1_seq1.mrna1;geneID=comp163077_c1_seq1.path1;Name=comp163077_c1_seq1;Dir=indeterminatecoverage=2.2;identity=93.8;matches=105;mismatches=6;indels=1;unknowns=0;Target=comp163077_c1_seq1 112 1 .;locus=RLOC_00011955
Chr1	stalkie_big_nohaplotig	exon	142592190	142592300	93	-	.	Parent=comp163077_c1_seq1.mrna1
Chr1	gffcl	locus	142592526	142598763	.	+	.	ID=RLOC_00011956;geneIDs=CPIJ018512.1.path1;transcripts=CPIJ018512.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142592526	142598763	.	+	.	ID=CPIJ018512.1.mrna1;geneID=CPIJ018512.1.path1;Name=CPIJ018512.1;Dir=sensecoverage=100.0;identity=99.8;matches=3726;mismatches=9;indels=0;unknowns=0;locus=RLOC_00011956
Chr1	stalkie_big_nohaplotig	exon	142592526	142593155	99	+	.	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 1 630 +
Chr1	stalkie_big_nohaplotig	exon	142593981	142594210	100	+	.	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 631 860 +
Chr1	stalkie_big_nohaplotig	exon	142594272	142594775	99	+	.	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 861 1364 +
Chr1	stalkie_big_nohaplotig	exon	142595491	142595899	99	+	.	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 1365 1773 +
Chr1	stalkie_big_nohaplotig	exon	142596319	142596418	100	+	.	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 1774 1873 +
Chr1	stalkie_big_nohaplotig	exon	142596487	142596749	99	+	.	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 1874 2136 +
Chr1	stalkie_big_nohaplotig	exon	142596826	142597014	100	+	.	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 2137 2325 +
Chr1	stalkie_big_nohaplotig	exon	142597083	142597606	99	+	.	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 2326 2849 +
Chr1	stalkie_big_nohaplotig	exon	142597676	142597848	100	+	.	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 2850 3022 +
Chr1	stalkie_big_nohaplotig	exon	142597917	142598152	100	+	.	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 3023 3258 +
Chr1	stalkie_big_nohaplotig	exon	142598228	142598319	100	+	.	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 3259 3350 +
Chr1	stalkie_big_nohaplotig	exon	142598379	142598763	100	+	.	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 3351 3735 +
Chr1	stalkie_big_nohaplotig	CDS	142592526	142593155	.	+	0	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 1 630 +
Chr1	stalkie_big_nohaplotig	CDS	142593981	142594210	.	+	0	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 631 860 +
Chr1	stalkie_big_nohaplotig	CDS	142594272	142594775	.	+	1	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 861 1364 +
Chr1	stalkie_big_nohaplotig	CDS	142595491	142595899	.	+	1	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 1365 1773 +
Chr1	stalkie_big_nohaplotig	CDS	142596319	142596418	.	+	0	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 1774 1873 +
Chr1	stalkie_big_nohaplotig	CDS	142596487	142596749	.	+	2	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 1874 2136 +
Chr1	stalkie_big_nohaplotig	CDS	142596826	142597014	.	+	0	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 2137 2325 +
Chr1	stalkie_big_nohaplotig	CDS	142597083	142597606	.	+	0	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 2326 2849 +
Chr1	stalkie_big_nohaplotig	CDS	142597676	142597848	.	+	1	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 2850 3022 +
Chr1	stalkie_big_nohaplotig	CDS	142597917	142598152	.	+	2	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 3023 3258 +
Chr1	stalkie_big_nohaplotig	CDS	142598228	142598319	.	+	0	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 3259 3350 +
Chr1	stalkie_big_nohaplotig	CDS	142598379	142598763	.	+	1	Parent=CPIJ018512.1.mrna1;Target=CPIJ018512.1 3351 3735 +
Chr1	gffcl	locus	142608273	142608592	.	-	.	ID=RLOC_00011957;geneIDs=comp104311_c0_seq1.path1;transcripts=comp104311_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142608273	142608592	.	-	.	ID=comp104311_c0_seq1.mrna1;geneID=comp104311_c0_seq1.path1;Name=comp104311_c0_seq1;Dir=indeterminatecoverage=90.6;identity=96.9;matches=311;mismatches=6;indels=4;unknowns=0;Target=comp104311_c0_seq1 350 33 .;CDS_Target=comp104311_c0_seq1 350 300 .;locus=RLOC_00011957
Chr1	stalkie_big_nohaplotig	exon	142608273	142608592	96	-	.	Parent=comp104311_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142608273	142608323	.	-	0	Parent=comp104311_c0_seq1.mrna1
Chr1	gffcl	locus	142609605	142610615	.	-	.	ID=RLOC_00011958;geneIDs=AAEL012215.1.path1;transcripts=AAEL012215.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142609605	142610615	.	-	.	ID=AAEL012215.1.mrna1;geneID=AAEL012215.1.path1;Name=AAEL012215.1;Dir=sensecoverage=99.6;identity=100.0;matches=669;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011958
Chr1	stalkie_big_nohaplotig	exon	142609605	142609689	100	-	.	Parent=AAEL012215.1.mrna1;Target=AAEL012215.1 588 672 +
Chr1	stalkie_big_nohaplotig	exon	142609932	142610181	100	-	.	Parent=AAEL012215.1.mrna1;Target=AAEL012215.1 338 587 +
Chr1	stalkie_big_nohaplotig	exon	142610282	142610615	100	-	.	Parent=AAEL012215.1.mrna1;Target=AAEL012215.1 4 337 +
Chr1	stalkie_big_nohaplotig	CDS	142609605	142609689	.	-	1	Parent=AAEL012215.1.mrna1;Target=AAEL012215.1 588 672 +
Chr1	stalkie_big_nohaplotig	CDS	142609932	142610181	.	-	2	Parent=AAEL012215.1.mrna1;Target=AAEL012215.1 338 587 +
Chr1	stalkie_big_nohaplotig	CDS	142610282	142610615	.	-	0	Parent=AAEL012215.1.mrna1;Target=AAEL012215.1 4 337 +
Chr1	gffcl	locus	142612738	142619205	.	.	.	ID=RLOC_00011959;geneIDs=FBgn0004432.1.path1,FBgn0004432.2.path1,FBgn0004432.3.path1,comp112390_c0_seq1.path1;transcripts=FBgn0004432.3.mrna1,FBgn0004432.2.mrna1,FBgn0004432.1.mrna1,comp112390_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142612738	142616565	.	+	.	ID=FBgn0004432.3.mrna1;geneID=FBgn0004432.3.path1;Name=FBgn0004432.3;Dir=sensecoverage=100.0;identity=100.0;matches=762;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011959
Chr1	stalkie_big_nohaplotig	exon	142612738	142613076	100	+	.	Parent=FBgn0004432.3.mrna1;Target=FBgn0004432.3 1 339 +
Chr1	stalkie_big_nohaplotig	exon	142616143	142616565	100	+	.	Parent=FBgn0004432.3.mrna1;Target=FBgn0004432.3 340 762 +
Chr1	stalkie_big_nohaplotig	CDS	142612738	142613076	.	+	0	Parent=FBgn0004432.3.mrna1;Target=FBgn0004432.3 1 339 +
Chr1	stalkie_big_nohaplotig	CDS	142616143	142616565	.	+	0	Parent=FBgn0004432.3.mrna1;Target=FBgn0004432.3 340 762 +
Chr1	stalkie_big_nohaplotig	mRNA	142612738	142618496	.	+	.	ID=FBgn0004432.2.mrna1;geneID=FBgn0004432.2.path1;Name=FBgn0004432.2;Dir=sensecoverage=100.0;identity=100.0;matches=765;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011959
Chr1	stalkie_big_nohaplotig	exon	142612738	142613076	100	+	.	Parent=FBgn0004432.2.mrna1;Target=FBgn0004432.2 1 339 +
Chr1	stalkie_big_nohaplotig	exon	142618071	142618496	100	+	.	Parent=FBgn0004432.2.mrna1;Target=FBgn0004432.2 340 765 +
Chr1	stalkie_big_nohaplotig	CDS	142612738	142613076	.	+	0	Parent=FBgn0004432.2.mrna1;Target=FBgn0004432.2 1 339 +
Chr1	stalkie_big_nohaplotig	CDS	142618071	142618496	.	+	0	Parent=FBgn0004432.2.mrna1;Target=FBgn0004432.2 340 765 +
Chr1	stalkie_big_nohaplotig	mRNA	142613059	142619205	.	+	.	ID=FBgn0004432.1.mrna1;geneID=FBgn0004432.1.path1;Name=FBgn0004432.1;Dir=sensecoverage=100.0;identity=99.5;matches=442;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011959
Chr1	stalkie_big_nohaplotig	exon	142613059	142613076	100	+	.	Parent=FBgn0004432.1.mrna1;Target=FBgn0004432.1 1 18 +
Chr1	stalkie_big_nohaplotig	exon	142618780	142619205	99	+	.	Parent=FBgn0004432.1.mrna1;Target=FBgn0004432.1 19 444 +
Chr1	stalkie_big_nohaplotig	CDS	142613059	142613076	.	+	0	Parent=FBgn0004432.1.mrna1;Target=FBgn0004432.1 1 18 +
Chr1	stalkie_big_nohaplotig	CDS	142618780	142619205	.	+	0	Parent=FBgn0004432.1.mrna1;Target=FBgn0004432.1 19 444 +
Chr1	stalkie_big_nohaplotig	mRNA	142615796	142616163	.	-	.	ID=comp112390_c0_seq1.mrna1;geneID=comp112390_c0_seq1.path1;Name=comp112390_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=365;mismatches=2;indels=1;unknowns=0;Target=comp112390_c0_seq1 367 1 .;CDS_Target=comp112390_c0_seq1 281 204 .;locus=RLOC_00011959
Chr1	stalkie_big_nohaplotig	exon	142615796	142616163	99	-	.	Parent=comp112390_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142615883	142615960	.	-	0	Parent=comp112390_c0_seq1.mrna1
Chr1	gffcl	locus	142613976	142614753	.	-	.	ID=RLOC_00011960;geneIDs=comp155540_c0_seq1.path1;transcripts=comp155540_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142613976	142614753	.	-	.	ID=comp155540_c0_seq1.mrna1;geneID=comp155540_c0_seq1.path1;Name=comp155540_c0_seq1;Dir=indeterminatecoverage=95.3;identity=97.7;matches=762;mismatches=7;indels=11;unknowns=0;Target=comp155540_c0_seq1 796 26 .;CDS_Target=comp155540_c0_seq1 122 27 .;locus=RLOC_00011960
Chr1	stalkie_big_nohaplotig	exon	142613976	142614753	97	-	.	Parent=comp155540_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142614657	142614752	.	-	0	Parent=comp155540_c0_seq1.mrna1
Chr1	gffcl	locus	142615273	142615698	.	+	.	ID=RLOC_00011961;geneIDs=FBgn0004432.4.path1;transcripts=FBgn0004432.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142615273	142615698	.	+	.	ID=FBgn0004432.4.mrna1;geneID=FBgn0004432.4.path1;Name=FBgn0004432.4;Dir=indeterminatecoverage=100.0;identity=100.0;matches=426;mismatches=0;indels=0;unknowns=0;Target=FBgn0004432.4 426 1 .;locus=RLOC_00011961
Chr1	stalkie_big_nohaplotig	exon	142615273	142615698	100	+	.	Parent=FBgn0004432.4.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142615273	142615698	.	+	0	Parent=FBgn0004432.4.mrna1
Chr1	gffcl	locus	142619453	142625007	.	-	.	ID=RLOC_00011962;geneIDs=comp117933_c0_seq1.path1,comp157374_c1_seq1.path1;transcripts=comp157374_c1_seq1.mrna1,comp117933_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142619453	142625007	.	-	.	ID=comp157374_c1_seq1.mrna1;geneID=comp157374_c1_seq1.path1;Name=comp157374_c1_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=2359;mismatches=9;indels=1;unknowns=0;locus=RLOC_00011962
Chr1	stalkie_big_nohaplotig	exon	142619453	142620117	100	-	.	Parent=comp157374_c1_seq1.mrna1;Target=comp157374_c1_seq1 1705 2369 +
Chr1	stalkie_big_nohaplotig	exon	142620223	142620379	99	-	.	Parent=comp157374_c1_seq1.mrna1;Target=comp157374_c1_seq1 1548 1704 +
Chr1	stalkie_big_nohaplotig	exon	142621418	142621544	100	-	.	Parent=comp157374_c1_seq1.mrna1;Target=comp157374_c1_seq1 1421 1547 +
Chr1	stalkie_big_nohaplotig	exon	142623392	142623700	98	-	.	Parent=comp157374_c1_seq1.mrna1;Target=comp157374_c1_seq1 1111 1420 +
Chr1	stalkie_big_nohaplotig	exon	142623765	142624143	100	-	.	Parent=comp157374_c1_seq1.mrna1;Target=comp157374_c1_seq1 732 1110 +
Chr1	stalkie_big_nohaplotig	exon	142624200	142624524	99	-	.	Parent=comp157374_c1_seq1.mrna1;Target=comp157374_c1_seq1 407 731 +
Chr1	stalkie_big_nohaplotig	exon	142624602	142625007	99	-	.	Parent=comp157374_c1_seq1.mrna1;Target=comp157374_c1_seq1 1 406 +
Chr1	stalkie_big_nohaplotig	CDS	142623651	142623700	.	-	0	Parent=comp157374_c1_seq1.mrna1;Target=comp157374_c1_seq1 1111 1161 +
Chr1	stalkie_big_nohaplotig	CDS	142623765	142624143	.	-	1	Parent=comp157374_c1_seq1.mrna1;Target=comp157374_c1_seq1 732 1110 +
Chr1	stalkie_big_nohaplotig	CDS	142624200	142624524	.	-	2	Parent=comp157374_c1_seq1.mrna1;Target=comp157374_c1_seq1 407 731 +
Chr1	stalkie_big_nohaplotig	CDS	142624602	142624662	.	-	0	Parent=comp157374_c1_seq1.mrna1;Target=comp157374_c1_seq1 346 406 +
Chr1	stalkie_big_nohaplotig	mRNA	142620357	142621433	.	-	.	ID=comp117933_c0_seq1.mrna1;geneID=comp117933_c0_seq1.path1;Name=comp117933_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=1062;mismatches=15;indels=9;unknowns=0;Target=comp117933_c0_seq1 1086 1 .;CDS_Target=comp117933_c0_seq1 147 1 .;locus=RLOC_00011962
Chr1	stalkie_big_nohaplotig	exon	142620357	142621433	97	-	.	Parent=comp117933_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142621288	142621433	.	-	0	Parent=comp117933_c0_seq1.mrna1
Chr1	gffcl	locus	142621635	142622115	.	+	.	ID=RLOC_00011963;geneIDs=comp152704_c0_seq1.path1;transcripts=comp152704_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142621635	142622115	.	+	.	ID=comp152704_c0_seq1.mrna1;geneID=comp152704_c0_seq1.path1;Name=comp152704_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=466;mismatches=15;indels=0;unknowns=0;Target=comp152704_c0_seq1 481 1 .;CDS_Target=comp152704_c0_seq1 479 138 .;locus=RLOC_00011963
Chr1	stalkie_big_nohaplotig	exon	142621635	142622115	96	+	.	Parent=comp152704_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142621772	142622113	.	+	0	Parent=comp152704_c0_seq1.mrna1
Chr1	gffcl	locus	142622593	142623207	.	+	.	ID=RLOC_00011964;geneIDs=comp112710_c0_seq1.path1;transcripts=comp112710_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142622593	142623207	.	+	.	ID=comp112710_c0_seq1.mrna1;geneID=comp112710_c0_seq1.path1;Name=comp112710_c0_seq1;Dir=indeterminatecoverage=93.2;identity=88.5;matches=539;mismatches=24;indels=46;unknowns=0;Target=comp112710_c0_seq1 417 409 .;locus=RLOC_00011964
Chr1	stalkie_big_nohaplotig	exon	142622593	142623076	87	+	.	Parent=comp112710_c0_seq1.mrna1;Target=comp112710_c0_seq1 443 3 .
Chr1	stalkie_big_nohaplotig	exon	142623084	142623207	94	+	.	Parent=comp112710_c0_seq1.mrna1;Target=comp112710_c0_seq1 591 469 .
Chr1	stalkie_big_nohaplotig	CDS	142623042	142623050	.	+	0	Parent=comp112710_c0_seq1.mrna1
Chr1	gffcl	locus	142633094	142633710	.	+	.	ID=RLOC_00011965;geneIDs=FBgn0050016.1.path1;transcripts=FBgn0050016.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142633094	142633710	.	+	.	ID=FBgn0050016.1.mrna1;geneID=FBgn0050016.1.path1;Name=FBgn0050016.1;Dir=sensecoverage=100.0;identity=100.0;matches=411;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011965
Chr1	stalkie_big_nohaplotig	exon	142633094	142633147	100	+	.	Parent=FBgn0050016.1.mrna1;Target=FBgn0050016.1 1 54 +
Chr1	stalkie_big_nohaplotig	exon	142633212	142633346	100	+	.	Parent=FBgn0050016.1.mrna1;Target=FBgn0050016.1 55 189 +
Chr1	stalkie_big_nohaplotig	exon	142633489	142633710	100	+	.	Parent=FBgn0050016.1.mrna1;Target=FBgn0050016.1 190 411 +
Chr1	stalkie_big_nohaplotig	CDS	142633094	142633147	.	+	0	Parent=FBgn0050016.1.mrna1;Target=FBgn0050016.1 1 54 +
Chr1	stalkie_big_nohaplotig	CDS	142633212	142633346	.	+	0	Parent=FBgn0050016.1.mrna1;Target=FBgn0050016.1 55 189 +
Chr1	stalkie_big_nohaplotig	CDS	142633489	142633710	.	+	0	Parent=FBgn0050016.1.mrna1;Target=FBgn0050016.1 190 411 +
Chr1	gffcl	locus	142638109	142638525	.	-	.	ID=RLOC_00011966;geneIDs=comp153194_c0_seq1.path1;transcripts=comp153194_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142638109	142638525	.	-	.	ID=comp153194_c0_seq1.mrna1;geneID=comp153194_c0_seq1.path1;Name=comp153194_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=411;mismatches=6;indels=0;unknowns=0;Target=comp153194_c0_seq1 417 1 .;CDS_Target=comp153194_c0_seq1 104 3 .;locus=RLOC_00011966
Chr1	stalkie_big_nohaplotig	exon	142638109	142638525	98	-	.	Parent=comp153194_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142638422	142638523	.	-	0	Parent=comp153194_c0_seq1.mrna1
Chr1	gffcl	locus	142639196	142651279	.	-	.	ID=RLOC_00011967;geneIDs=FBgn0030735.1.path1,comp149824_c0_seq1.path1,comp348176_c0_seq1.path1;transcripts=FBgn0030735.1.mrna1,comp348176_c0_seq1.mrna1,comp149824_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142639196	142648740	.	-	.	ID=FBgn0030735.1.mrna1;geneID=FBgn0030735.1.path1;Name=FBgn0030735.1;Dir=sensecoverage=100.0;identity=99.7;matches=4008;mismatches=12;indels=0;unknowns=0;locus=RLOC_00011967
Chr1	stalkie_big_nohaplotig	exon	142639196	142639445	100	-	.	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 3771 4020 +
Chr1	stalkie_big_nohaplotig	exon	142642853	142643052	99	-	.	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 3571 3770 +
Chr1	stalkie_big_nohaplotig	exon	142643893	142644000	100	-	.	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 3463 3570 +
Chr1	stalkie_big_nohaplotig	exon	142644282	142644441	100	-	.	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 3303 3462 +
Chr1	stalkie_big_nohaplotig	exon	142644500	142644972	100	-	.	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 2830 3302 +
Chr1	stalkie_big_nohaplotig	exon	142645037	142645263	100	-	.	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 2603 2829 +
Chr1	stalkie_big_nohaplotig	exon	142645347	142645996	99	-	.	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 1953 2602 +
Chr1	stalkie_big_nohaplotig	exon	142646340	142646445	100	-	.	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 1847 1952 +
Chr1	stalkie_big_nohaplotig	exon	142646506	142646632	100	-	.	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 1720 1846 +
Chr1	stalkie_big_nohaplotig	exon	142646711	142646875	100	-	.	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 1555 1719 +
Chr1	stalkie_big_nohaplotig	exon	142646943	142647128	100	-	.	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 1369 1554 +
Chr1	stalkie_big_nohaplotig	exon	142647193	142647388	98	-	.	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 1173 1368 +
Chr1	stalkie_big_nohaplotig	exon	142647448	142647638	100	-	.	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 982 1172 +
Chr1	stalkie_big_nohaplotig	exon	142647698	142648560	99	-	.	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 119 981 +
Chr1	stalkie_big_nohaplotig	exon	142648623	142648740	99	-	.	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 1 118 +
Chr1	stalkie_big_nohaplotig	CDS	142639196	142639445	.	-	1	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 3771 4020 +
Chr1	stalkie_big_nohaplotig	CDS	142642853	142643052	.	-	0	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 3571 3770 +
Chr1	stalkie_big_nohaplotig	CDS	142643893	142644000	.	-	0	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 3463 3570 +
Chr1	stalkie_big_nohaplotig	CDS	142644282	142644441	.	-	1	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 3303 3462 +
Chr1	stalkie_big_nohaplotig	CDS	142644500	142644972	.	-	0	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 2830 3302 +
Chr1	stalkie_big_nohaplotig	CDS	142645037	142645263	.	-	2	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 2603 2829 +
Chr1	stalkie_big_nohaplotig	CDS	142645347	142645996	.	-	1	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 1953 2602 +
Chr1	stalkie_big_nohaplotig	CDS	142646340	142646445	.	-	2	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 1847 1952 +
Chr1	stalkie_big_nohaplotig	CDS	142646506	142646632	.	-	0	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 1720 1846 +
Chr1	stalkie_big_nohaplotig	CDS	142646711	142646875	.	-	0	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 1555 1719 +
Chr1	stalkie_big_nohaplotig	CDS	142646943	142647128	.	-	0	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 1369 1554 +
Chr1	stalkie_big_nohaplotig	CDS	142647193	142647388	.	-	1	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 1173 1368 +
Chr1	stalkie_big_nohaplotig	CDS	142647448	142647638	.	-	0	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 982 1172 +
Chr1	stalkie_big_nohaplotig	CDS	142647698	142648560	.	-	2	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 119 981 +
Chr1	stalkie_big_nohaplotig	CDS	142648623	142648740	.	-	0	Parent=FBgn0030735.1.mrna1;Target=FBgn0030735.1 1 118 +
Chr1	stalkie_big_nohaplotig	mRNA	142643440	142643916	.	-	.	ID=comp348176_c0_seq1.mrna1;geneID=comp348176_c0_seq1.path1;Name=comp348176_c0_seq1;Dir=sensecoverage=97.5;identity=100.0;matches=231;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011967
Chr1	stalkie_big_nohaplotig	exon	142643440	142643646	100	-	.	Parent=comp348176_c0_seq1.mrna1;Target=comp348176_c0_seq1 25 231 +
Chr1	stalkie_big_nohaplotig	exon	142643893	142643916	100	-	.	Parent=comp348176_c0_seq1.mrna1;Target=comp348176_c0_seq1 1 24 +
Chr1	stalkie_big_nohaplotig	CDS	142643440	142643646	.	-	0	Parent=comp348176_c0_seq1.mrna1;Target=comp348176_c0_seq1 25 231 +
Chr1	stalkie_big_nohaplotig	CDS	142643893	142643916	.	-	0	Parent=comp348176_c0_seq1.mrna1;Target=comp348176_c0_seq1 1 24 +
Chr1	stalkie_big_nohaplotig	mRNA	142648723	142651279	.	-	.	ID=comp149824_c0_seq1.mrna1;geneID=comp149824_c0_seq1.path1;Name=comp149824_c0_seq1;Dir=antisensecoverage=94.9;identity=98.8;matches=557;mismatches=5;indels=2;unknowns=0;Target=comp149824_c0_seq1 267 431 .;locus=RLOC_00011967
Chr1	stalkie_big_nohaplotig	exon	142648723	142648744	100	-	.	Parent=comp149824_c0_seq1.mrna1;Target=comp149824_c0_seq1 1 22 -
Chr1	stalkie_big_nohaplotig	exon	142650740	142651279	98	-	.	Parent=comp149824_c0_seq1.mrna1;Target=comp149824_c0_seq1 23 564 -
Chr1	stalkie_big_nohaplotig	CDS	142650984	142651146	.	-	0	Parent=comp149824_c0_seq1.mrna1
Chr1	gffcl	locus	142641590	142642202	.	+	.	ID=RLOC_00011968;geneIDs=comp157667_c0_seq1.path1;transcripts=comp157667_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142641590	142642202	.	+	.	ID=comp157667_c0_seq1.mrna1;geneID=comp157667_c0_seq1.path1;Name=comp157667_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=607;mismatches=6;indels=0;unknowns=0;Target=comp157667_c0_seq1 613 1 .;CDS_Target=comp157667_c0_seq1 163 2 .;locus=RLOC_00011968
Chr1	stalkie_big_nohaplotig	exon	142641590	142642202	99	+	.	Parent=comp157667_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142641591	142641752	.	+	0	Parent=comp157667_c0_seq1.mrna1
Chr1	gffcl	locus	142660062	142666500	.	.	.	ID=RLOC_00011969;geneIDs=FBgn0030734.1.path1,comp156179_c0_seq1.path1;transcripts=FBgn0030734.1.mrna1,comp156179_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142660062	142666500	.	+	.	ID=FBgn0030734.1.mrna1;geneID=FBgn0030734.1.path1;Name=FBgn0030734.1;Dir=sensecoverage=100.0;identity=99.9;matches=1238;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011969
Chr1	stalkie_big_nohaplotig	exon	142660062	142660121	100	+	.	Parent=FBgn0030734.1.mrna1;Target=FBgn0030734.1 1 60 +
Chr1	stalkie_big_nohaplotig	exon	142660292	142660367	100	+	.	Parent=FBgn0030734.1.mrna1;Target=FBgn0030734.1 61 136 +
Chr1	stalkie_big_nohaplotig	exon	142663951	142664042	100	+	.	Parent=FBgn0030734.1.mrna1;Target=FBgn0030734.1 137 228 +
Chr1	stalkie_big_nohaplotig	exon	142664106	142664499	99	+	.	Parent=FBgn0030734.1.mrna1;Target=FBgn0030734.1 229 622 +
Chr1	stalkie_big_nohaplotig	exon	142665198	142665464	100	+	.	Parent=FBgn0030734.1.mrna1;Target=FBgn0030734.1 623 889 +
Chr1	stalkie_big_nohaplotig	exon	142665547	142665745	100	+	.	Parent=FBgn0030734.1.mrna1;Target=FBgn0030734.1 890 1088 +
Chr1	stalkie_big_nohaplotig	exon	142666350	142666500	100	+	.	Parent=FBgn0030734.1.mrna1;Target=FBgn0030734.1 1089 1239 +
Chr1	stalkie_big_nohaplotig	CDS	142660062	142660121	.	+	0	Parent=FBgn0030734.1.mrna1;Target=FBgn0030734.1 1 60 +
Chr1	stalkie_big_nohaplotig	CDS	142660292	142660367	.	+	0	Parent=FBgn0030734.1.mrna1;Target=FBgn0030734.1 61 136 +
Chr1	stalkie_big_nohaplotig	CDS	142663951	142664042	.	+	2	Parent=FBgn0030734.1.mrna1;Target=FBgn0030734.1 137 228 +
Chr1	stalkie_big_nohaplotig	CDS	142664106	142664499	.	+	0	Parent=FBgn0030734.1.mrna1;Target=FBgn0030734.1 229 622 +
Chr1	stalkie_big_nohaplotig	CDS	142665198	142665464	.	+	2	Parent=FBgn0030734.1.mrna1;Target=FBgn0030734.1 623 889 +
Chr1	stalkie_big_nohaplotig	CDS	142665547	142665745	.	+	2	Parent=FBgn0030734.1.mrna1;Target=FBgn0030734.1 890 1088 +
Chr1	stalkie_big_nohaplotig	CDS	142666350	142666500	.	+	1	Parent=FBgn0030734.1.mrna1;Target=FBgn0030734.1 1089 1239 +
Chr1	stalkie_big_nohaplotig	mRNA	142664594	142665217	.	-	.	ID=comp156179_c0_seq1.mrna1;geneID=comp156179_c0_seq1.path1;Name=comp156179_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=621;mismatches=3;indels=1;unknowns=0;Target=comp156179_c0_seq1 625 1 .;CDS_Target=comp156179_c0_seq1 623 501 .;locus=RLOC_00011969
Chr1	stalkie_big_nohaplotig	exon	142664594	142665217	99	-	.	Parent=comp156179_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142664596	142664718	.	-	0	Parent=comp156179_c0_seq1.mrna1
Chr1	gffcl	locus	142669420	142669731	.	+	.	ID=RLOC_00011970;geneIDs=comp151345_c0_seq1.path1;transcripts=comp151345_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142669420	142669731	.	+	.	ID=comp151345_c0_seq1.mrna1;geneID=comp151345_c0_seq1.path1;Name=comp151345_c0_seq1;Dir=indeterminatecoverage=92.6;identity=96.5;matches=301;mismatches=11;indels=0;unknowns=0;Target=comp151345_c0_seq1 312 1 .;CDS_Target=comp151345_c0_seq1 92 45 .;locus=RLOC_00011970
Chr1	stalkie_big_nohaplotig	exon	142669420	142669731	96	+	.	Parent=comp151345_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142669464	142669511	.	+	0	Parent=comp151345_c0_seq1.mrna1
Chr1	gffcl	locus	142670042	142670609	.	-	.	ID=RLOC_00011971;geneIDs=FBgn0031268.1.path1;transcripts=FBgn0031268.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142670042	142670609	.	-	.	ID=FBgn0031268.1.mrna1;geneID=FBgn0031268.1.path1;Name=FBgn0031268.1;Dir=sensecoverage=100.0;identity=99.6;matches=454;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011971
Chr1	stalkie_big_nohaplotig	exon	142670042	142670125	100	-	.	Parent=FBgn0031268.1.mrna1;Target=FBgn0031268.1 373 456 +
Chr1	stalkie_big_nohaplotig	exon	142670185	142670492	99	-	.	Parent=FBgn0031268.1.mrna1;Target=FBgn0031268.1 65 372 +
Chr1	stalkie_big_nohaplotig	exon	142670546	142670609	98	-	.	Parent=FBgn0031268.1.mrna1;Target=FBgn0031268.1 1 64 +
Chr1	stalkie_big_nohaplotig	CDS	142670042	142670125	.	-	0	Parent=FBgn0031268.1.mrna1;Target=FBgn0031268.1 373 456 +
Chr1	stalkie_big_nohaplotig	CDS	142670185	142670492	.	-	2	Parent=FBgn0031268.1.mrna1;Target=FBgn0031268.1 65 372 +
Chr1	stalkie_big_nohaplotig	CDS	142670546	142670609	.	-	0	Parent=FBgn0031268.1.mrna1;Target=FBgn0031268.1 1 64 +
Chr1	gffcl	locus	142673360	142674341	.	-	.	ID=RLOC_00011972;geneIDs=FBgn0037263.1.path1;transcripts=FBgn0037263.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142673360	142674341	.	-	.	ID=FBgn0037263.1.mrna1;geneID=FBgn0037263.1.path1;Name=FBgn0037263.1;Dir=sensecoverage=100.0;identity=100.0;matches=858;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011972
Chr1	stalkie_big_nohaplotig	exon	142673360	142673782	100	-	.	Parent=FBgn0037263.1.mrna1;Target=FBgn0037263.1 436 858 +
Chr1	stalkie_big_nohaplotig	exon	142673846	142674040	100	-	.	Parent=FBgn0037263.1.mrna1;Target=FBgn0037263.1 241 435 +
Chr1	stalkie_big_nohaplotig	exon	142674102	142674341	100	-	.	Parent=FBgn0037263.1.mrna1;Target=FBgn0037263.1 1 240 +
Chr1	stalkie_big_nohaplotig	CDS	142673360	142673782	.	-	0	Parent=FBgn0037263.1.mrna1;Target=FBgn0037263.1 436 858 +
Chr1	stalkie_big_nohaplotig	CDS	142673846	142674040	.	-	0	Parent=FBgn0037263.1.mrna1;Target=FBgn0037263.1 241 435 +
Chr1	stalkie_big_nohaplotig	CDS	142674102	142674341	.	-	0	Parent=FBgn0037263.1.mrna1;Target=FBgn0037263.1 1 240 +
Chr1	gffcl	locus	142675150	142675550	.	+	.	ID=RLOC_00011973;geneIDs=FBgn0035521.1.path1;transcripts=FBgn0035521.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142675150	142675550	.	+	.	ID=FBgn0035521.1.mrna1;geneID=FBgn0035521.1.path1;Name=FBgn0035521.1;Dir=sensecoverage=100.0;identity=100.0;matches=345;mismatches=0;indels=0;unknowns=0;locus=RLOC_00011973
Chr1	stalkie_big_nohaplotig	exon	142675150	142675326	100	+	.	Parent=FBgn0035521.1.mrna1;Target=FBgn0035521.1 1 177 +
Chr1	stalkie_big_nohaplotig	exon	142675383	142675550	100	+	.	Parent=FBgn0035521.1.mrna1;Target=FBgn0035521.1 178 345 +
Chr1	stalkie_big_nohaplotig	CDS	142675150	142675326	.	+	0	Parent=FBgn0035521.1.mrna1;Target=FBgn0035521.1 1 177 +
Chr1	stalkie_big_nohaplotig	CDS	142675383	142675550	.	+	0	Parent=FBgn0035521.1.mrna1;Target=FBgn0035521.1 178 345 +
Chr1	gffcl	locus	142675894	142676874	.	-	.	ID=RLOC_00011974;geneIDs=FBgn0028707.1.path1;transcripts=FBgn0028707.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142675894	142676874	.	-	.	ID=FBgn0028707.1.mrna1;geneID=FBgn0028707.1.path1;Name=FBgn0028707.1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=962;mismatches=19;indels=0;unknowns=0;Target=FBgn0028707.1 981 1 .;locus=RLOC_00011974
Chr1	stalkie_big_nohaplotig	exon	142675894	142676874	98	-	.	Parent=FBgn0028707.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142675894	142676874	.	-	0	Parent=FBgn0028707.1.mrna1
Chr1	gffcl	locus	142678531	142692428	.	+	.	ID=RLOC_00011975;geneIDs=FBgn0085451.1.path1;transcripts=FBgn0085451.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142678531	142692428	.	+	.	ID=FBgn0085451.1.mrna1;geneID=FBgn0085451.1.path1;Name=FBgn0085451.1;Dir=sensecoverage=100.0;identity=99.5;matches=6785;mismatches=31;indels=0;unknowns=0;locus=RLOC_00011975
Chr1	stalkie_big_nohaplotig	exon	142678531	142678635	100	+	.	Parent=FBgn0085451.1.mrna1;Target=FBgn0085451.1 1 105 +
Chr1	stalkie_big_nohaplotig	exon	142678774	142679379	99	+	.	Parent=FBgn0085451.1.mrna1;Target=FBgn0085451.1 106 711 +
Chr1	stalkie_big_nohaplotig	exon	142679436	142680468	99	+	.	Parent=FBgn0085451.1.mrna1;Target=FBgn0085451.1 712 1744 +
Chr1	stalkie_big_nohaplotig	exon	142687243	142691991	99	+	.	Parent=FBgn0085451.1.mrna1;Target=FBgn0085451.1 1745 6493 +
Chr1	stalkie_big_nohaplotig	exon	142692057	142692191	100	+	.	Parent=FBgn0085451.1.mrna1;Target=FBgn0085451.1 6494 6628 +
Chr1	stalkie_big_nohaplotig	exon	142692241	142692428	100	+	.	Parent=FBgn0085451.1.mrna1;Target=FBgn0085451.1 6629 6816 +
Chr1	stalkie_big_nohaplotig	CDS	142678531	142678635	.	+	0	Parent=FBgn0085451.1.mrna1;Target=FBgn0085451.1 1 105 +
Chr1	stalkie_big_nohaplotig	CDS	142678774	142679379	.	+	0	Parent=FBgn0085451.1.mrna1;Target=FBgn0085451.1 106 711 +
Chr1	stalkie_big_nohaplotig	CDS	142679436	142680468	.	+	0	Parent=FBgn0085451.1.mrna1;Target=FBgn0085451.1 712 1744 +
Chr1	stalkie_big_nohaplotig	CDS	142687243	142691991	.	+	2	Parent=FBgn0085451.1.mrna1;Target=FBgn0085451.1 1745 6493 +
Chr1	stalkie_big_nohaplotig	CDS	142692057	142692191	.	+	2	Parent=FBgn0085451.1.mrna1;Target=FBgn0085451.1 6494 6628 +
Chr1	stalkie_big_nohaplotig	CDS	142692241	142692428	.	+	2	Parent=FBgn0085451.1.mrna1;Target=FBgn0085451.1 6629 6816 +
Chr1	gffcl	locus	142680793	142682637	.	-	.	ID=RLOC_00011976;geneIDs=FBgn0030966.1.path1;transcripts=FBgn0030966.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142680793	142682637	.	-	.	ID=FBgn0030966.1.mrna1;geneID=FBgn0030966.1.path1;Name=FBgn0030966.1;Dir=sensecoverage=100.0;identity=98.7;matches=1765;mismatches=23;indels=0;unknowns=0;locus=RLOC_00011976
Chr1	stalkie_big_nohaplotig	exon	142680793	142681598	98	-	.	Parent=FBgn0030966.1.mrna1;Target=FBgn0030966.1 983 1788 +
Chr1	stalkie_big_nohaplotig	exon	142681656	142682637	98	-	.	Parent=FBgn0030966.1.mrna1;Target=FBgn0030966.1 1 982 +
Chr1	stalkie_big_nohaplotig	CDS	142680793	142681598	.	-	2	Parent=FBgn0030966.1.mrna1;Target=FBgn0030966.1 983 1788 +
Chr1	stalkie_big_nohaplotig	CDS	142681656	142682637	.	-	0	Parent=FBgn0030966.1.mrna1;Target=FBgn0030966.1 1 982 +
Chr1	gffcl	locus	142692723	142693568	.	-	.	ID=RLOC_00011977;geneIDs=FBgn0030968.1.path1;transcripts=FBgn0030968.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142692723	142693568	.	-	.	ID=FBgn0030968.1.mrna1;geneID=FBgn0030968.1.path1;Name=FBgn0030968.1;Dir=sensecoverage=100.0;identity=99.6;matches=726;mismatches=3;indels=0;unknowns=0;locus=RLOC_00011977
Chr1	stalkie_big_nohaplotig	exon	142692723	142693140	99	-	.	Parent=FBgn0030968.1.mrna1;Target=FBgn0030968.1 312 729 +
Chr1	stalkie_big_nohaplotig	exon	142693201	142693453	100	-	.	Parent=FBgn0030968.1.mrna1;Target=FBgn0030968.1 59 311 +
Chr1	stalkie_big_nohaplotig	exon	142693511	142693568	98	-	.	Parent=FBgn0030968.1.mrna1;Target=FBgn0030968.1 1 58 +
Chr1	stalkie_big_nohaplotig	CDS	142692723	142693140	.	-	1	Parent=FBgn0030968.1.mrna1;Target=FBgn0030968.1 312 729 +
Chr1	stalkie_big_nohaplotig	CDS	142693201	142693453	.	-	2	Parent=FBgn0030968.1.mrna1;Target=FBgn0030968.1 59 311 +
Chr1	stalkie_big_nohaplotig	CDS	142693511	142693568	.	-	0	Parent=FBgn0030968.1.mrna1;Target=FBgn0030968.1 1 58 +
Chr1	gffcl	locus	142705369	142715791	.	+	.	ID=RLOC_00011978;geneIDs=comp147018_c0_seq1.path1;transcripts=comp147018_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142705369	142715791	.	+	.	ID=comp147018_c0_seq1.mrna1;geneID=comp147018_c0_seq1.path1;Name=comp147018_c0_seq1;Dir=antisensecoverage=97.9;identity=99.8;matches=834;mismatches=1;indels=1;unknowns=0;locus=RLOC_00011978
Chr1	stalkie_big_nohaplotig	exon	142705369	142705542	98	+	.	Parent=comp147018_c0_seq1.mrna1;Target=comp147018_c0_seq1 686 858 -
Chr1	stalkie_big_nohaplotig	exon	142705614	142706255	100	+	.	Parent=comp147018_c0_seq1.mrna1;Target=comp147018_c0_seq1 44 685 -
Chr1	stalkie_big_nohaplotig	exon	142711628	142711638	100	+	.	Parent=comp147018_c0_seq1.mrna1;Target=comp147018_c0_seq1 33 43 -
Chr1	stalkie_big_nohaplotig	exon	142715472	142715476	100	+	.	Parent=comp147018_c0_seq1.mrna1;Target=comp147018_c0_seq1 28 32 -
Chr1	stalkie_big_nohaplotig	exon	142715789	142715791	100	+	.	Parent=comp147018_c0_seq1.mrna1;Target=comp147018_c0_seq1 25 27 -
Chr1	stalkie_big_nohaplotig	CDS	142705489	142705542	.	+	0	Parent=comp147018_c0_seq1.mrna1;Target=comp147018_c0_seq1 686 739 .
Chr1	stalkie_big_nohaplotig	CDS	142705614	142706204	.	+	0	Parent=comp147018_c0_seq1.mrna1;Target=comp147018_c0_seq1 95 685 .
Chr1	gffcl	locus	142710885	142711595	.	+	.	ID=RLOC_00011979;geneIDs=FBgn0030837.1.path1;transcripts=FBgn0030837.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142710885	142711595	.	+	.	ID=FBgn0030837.1.mrna1;geneID=FBgn0030837.1.path1;Name=FBgn0030837.1;Dir=sensecoverage=100.0;identity=99.8;matches=569;mismatches=1;indels=0;unknowns=0;locus=RLOC_00011979
Chr1	stalkie_big_nohaplotig	exon	142710885	142710962	98	+	.	Parent=FBgn0030837.1.mrna1;Target=FBgn0030837.1 1 78 +
Chr1	stalkie_big_nohaplotig	exon	142711104	142711595	100	+	.	Parent=FBgn0030837.1.mrna1;Target=FBgn0030837.1 79 570 +
Chr1	stalkie_big_nohaplotig	CDS	142710885	142710962	.	+	0	Parent=FBgn0030837.1.mrna1;Target=FBgn0030837.1 1 78 +
Chr1	stalkie_big_nohaplotig	CDS	142711104	142711595	.	+	0	Parent=FBgn0030837.1.mrna1;Target=FBgn0030837.1 79 570 +
Chr1	gffcl	locus	142713902	142714655	.	+	.	ID=RLOC_00011980;geneIDs=comp154748_c0_seq1.path1;transcripts=comp154748_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142713902	142714655	.	+	.	ID=comp154748_c0_seq1.mrna1;geneID=comp154748_c0_seq1.path1;Name=comp154748_c0_seq1;Dir=sensecoverage=96.9;identity=99.7;matches=696;mismatches=2;indels=0;unknowns=0;locus=RLOC_00011980
Chr1	stalkie_big_nohaplotig	exon	142713902	142713981	100	+	.	Parent=comp154748_c0_seq1.mrna1;Target=comp154748_c0_seq1 18 97 +
Chr1	stalkie_big_nohaplotig	exon	142714038	142714655	99	+	.	Parent=comp154748_c0_seq1.mrna1;Target=comp154748_c0_seq1 98 715 +
Chr1	stalkie_big_nohaplotig	CDS	142713904	142713981	.	+	0	Parent=comp154748_c0_seq1.mrna1;Target=comp154748_c0_seq1 20 97 +
Chr1	stalkie_big_nohaplotig	CDS	142714038	142714592	.	+	0	Parent=comp154748_c0_seq1.mrna1;Target=comp154748_c0_seq1 98 652 +
Chr1	gffcl	locus	142735003	142765092	.	+	.	ID=RLOC_00011981;geneIDs=FBgn0262111.path1;transcripts=FBgn0262111.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142735003	142765092	.	+	.	ID=FBgn0262111.mrna1;geneID=FBgn0262111.path1;Name=FBgn0262111;Dir=sensecoverage=98.1;identity=99.1;matches=1858;mismatches=16;indels=0;unknowns=0;locus=RLOC_00011981
Chr1	stalkie_big_nohaplotig	exon	142735003	142735203	99	+	.	Parent=FBgn0262111.mrna1;Target=FBgn0262111 36 236 +
Chr1	stalkie_big_nohaplotig	exon	142758043	142758226	100	+	.	Parent=FBgn0262111.mrna1;Target=FBgn0262111 237 420 +
Chr1	stalkie_big_nohaplotig	exon	142763309	142763491	98	+	.	Parent=FBgn0262111.mrna1;Target=FBgn0262111 421 603 +
Chr1	stalkie_big_nohaplotig	exon	142763700	142764719	99	+	.	Parent=FBgn0262111.mrna1;Target=FBgn0262111 604 1623 +
Chr1	stalkie_big_nohaplotig	exon	142764807	142765092	98	+	.	Parent=FBgn0262111.mrna1;Target=FBgn0262111 1624 1909 +
Chr1	stalkie_big_nohaplotig	CDS	142735004	142735203	.	+	0	Parent=FBgn0262111.mrna1;Target=FBgn0262111 37 236 +
Chr1	stalkie_big_nohaplotig	CDS	142758043	142758226	.	+	1	Parent=FBgn0262111.mrna1;Target=FBgn0262111 237 420 +
Chr1	stalkie_big_nohaplotig	CDS	142763309	142763491	.	+	0	Parent=FBgn0262111.mrna1;Target=FBgn0262111 421 603 +
Chr1	stalkie_big_nohaplotig	CDS	142763700	142764719	.	+	0	Parent=FBgn0262111.mrna1;Target=FBgn0262111 604 1623 +
Chr1	stalkie_big_nohaplotig	CDS	142764807	142765091	.	+	0	Parent=FBgn0262111.mrna1;Target=FBgn0262111 1624 1908 +
Chr1	gffcl	locus	142804857	142805655	.	+	.	ID=RLOC_00011982;geneIDs=FBgn0030834.1.path1;transcripts=FBgn0030834.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142804857	142805655	.	+	.	ID=FBgn0030834.1.mrna1;geneID=FBgn0030834.1.path1;Name=FBgn0030834.1;Dir=sensecoverage=100.0;identity=96.9;matches=718;mismatches=8;indels=15;unknowns=0;locus=RLOC_00011982
Chr1	stalkie_big_nohaplotig	exon	142804857	142804912	100	+	.	Parent=FBgn0030834.1.mrna1;Target=FBgn0030834.1 1 56 +
Chr1	stalkie_big_nohaplotig	exon	142804971	142805655	96	+	.	Parent=FBgn0030834.1.mrna1;Target=FBgn0030834.1 57 726 +
Chr1	stalkie_big_nohaplotig	CDS	142804857	142804912	.	+	0	Parent=FBgn0030834.1.mrna1;Target=FBgn0030834.1 1 56 +
Chr1	stalkie_big_nohaplotig	CDS	142804971	142805655	.	+	1	Parent=FBgn0030834.1.mrna1;Target=FBgn0030834.1 57 726 +
Chr1	gffcl	locus	142807840	142811664	.	+	.	ID=RLOC_00011983;geneIDs=FBgn0030833.1.path1;transcripts=FBgn0030833.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142807840	142811664	.	+	.	ID=FBgn0030833.1.mrna1;geneID=FBgn0030833.1.path1;Name=FBgn0030833.1;Dir=sensecoverage=100.0;identity=99.5;matches=3005;mismatches=15;indels=1;unknowns=0;Target=FBgn0030833.1 3 32 +;locus=RLOC_00011983
Chr1	stalkie_big_nohaplotig	exon	142807840	142808147	99	+	.	Parent=FBgn0030833.1.mrna1;Target=FBgn0030833.1 1 309 +
Chr1	stalkie_big_nohaplotig	exon	142808219	142808426	99	+	.	Parent=FBgn0030833.1.mrna1;Target=FBgn0030833.1 310 517 +
Chr1	stalkie_big_nohaplotig	exon	142808487	142809086	99	+	.	Parent=FBgn0030833.1.mrna1;Target=FBgn0030833.1 518 1117 +
Chr1	stalkie_big_nohaplotig	exon	142809761	142811664	99	+	.	Parent=FBgn0030833.1.mrna1;Target=FBgn0030833.1 1118 3021 +
Chr1	stalkie_big_nohaplotig	CDS	142807842	142807870	.	+	0	Parent=FBgn0030833.1.mrna1
Chr1	gffcl	locus	142812787	142813300	.	+	.	ID=RLOC_00011984;geneIDs=comp147728_c0_seq1.path1;transcripts=comp147728_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142812787	142813300	.	+	.	ID=comp147728_c0_seq1.mrna1;geneID=comp147728_c0_seq1.path1;Name=comp147728_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.8;matches=508;mismatches=6;indels=0;unknowns=0;Target=comp147728_c0_seq1 515 2 .;CDS_Target=comp147728_c0_seq1 194 120 .;locus=RLOC_00011984
Chr1	stalkie_big_nohaplotig	exon	142812787	142813300	98	+	.	Parent=comp147728_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142812905	142812979	.	+	0	Parent=comp147728_c0_seq1.mrna1
Chr1	gffcl	locus	142814255	142815517	.	-	.	ID=RLOC_00011985;geneIDs=comp161668_c0_seq1.path1;transcripts=comp161668_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142814255	142815517	.	-	.	ID=comp161668_c0_seq1.mrna1;geneID=comp161668_c0_seq1.path1;Name=comp161668_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.7;matches=1226;mismatches=37;indels=18;unknowns=0;Target=comp161668_c0_seq1 1281 1 .;CDS_Target=comp161668_c0_seq1 153 61 .;locus=RLOC_00011985
Chr1	stalkie_big_nohaplotig	exon	142814255	142815517	95	-	.	Parent=comp161668_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142815365	142815457	.	-	0	Parent=comp161668_c0_seq1.mrna1
Chr1	gffcl	locus	142816004	142816339	.	-	.	ID=RLOC_00011986;geneIDs=comp148082_c0_seq1.path1;transcripts=comp148082_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142816004	142816339	.	-	.	ID=comp148082_c0_seq1.mrna1;geneID=comp148082_c0_seq1.path1;Name=comp148082_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=327;mismatches=9;indels=0;unknowns=0;Target=comp148082_c0_seq1 336 1 .;CDS_Target=comp148082_c0_seq1 103 2 .;locus=RLOC_00011986
Chr1	stalkie_big_nohaplotig	exon	142816004	142816339	97	-	.	Parent=comp148082_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142816237	142816338	.	-	0	Parent=comp148082_c0_seq1.mrna1
Chr1	gffcl	locus	142873405	142874165	.	+	.	ID=RLOC_00011987;geneIDs=FBgn0030098.1.path1;transcripts=FBgn0030098.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142873405	142874165	.	+	.	ID=FBgn0030098.1.mrna1;geneID=FBgn0030098.1.path1;Name=FBgn0030098.1;Dir=sensecoverage=100.0;identity=98.9;matches=688;mismatches=8;indels=0;unknowns=0;locus=RLOC_00011987
Chr1	stalkie_big_nohaplotig	exon	142873405	142873500	96	+	.	Parent=FBgn0030098.1.mrna1;Target=FBgn0030098.1 1 96 +
Chr1	stalkie_big_nohaplotig	exon	142873566	142874165	99	+	.	Parent=FBgn0030098.1.mrna1;Target=FBgn0030098.1 97 696 +
Chr1	stalkie_big_nohaplotig	CDS	142873405	142873500	.	+	0	Parent=FBgn0030098.1.mrna1;Target=FBgn0030098.1 1 96 +
Chr1	stalkie_big_nohaplotig	CDS	142873566	142874165	.	+	0	Parent=FBgn0030098.1.mrna1;Target=FBgn0030098.1 97 696 +
Chr1	gffcl	locus	142877035	142880168	.	-	.	ID=RLOC_00011988;geneIDs=comp159073_c0_seq1.path1;transcripts=comp159073_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142877035	142880168	.	-	.	ID=comp159073_c0_seq1.mrna1;geneID=comp159073_c0_seq1.path1;Name=comp159073_c0_seq1;Dir=sensecoverage=97.1;identity=98.1;matches=891;mismatches=15;indels=2;unknowns=0;locus=RLOC_00011988
Chr1	stalkie_big_nohaplotig	exon	142877035	142877648	99	-	.	Parent=comp159073_c0_seq1.mrna1;Target=comp159073_c0_seq1 318 931 +
Chr1	stalkie_big_nohaplotig	exon	142877711	142877853	98	-	.	Parent=comp159073_c0_seq1.mrna1;Target=comp159073_c0_seq1 175 317 +
Chr1	stalkie_big_nohaplotig	exon	142880018	142880168	92	-	.	Parent=comp159073_c0_seq1.mrna1;Target=comp159073_c0_seq1 26 174 +
Chr1	stalkie_big_nohaplotig	CDS	142877098	142877648	.	-	2	Parent=comp159073_c0_seq1.mrna1;Target=comp159073_c0_seq1 318 868 +
Chr1	stalkie_big_nohaplotig	CDS	142877711	142877780	.	-	0	Parent=comp159073_c0_seq1.mrna1;Target=comp159073_c0_seq1 248 317 +
Chr1	gffcl	locus	142895433	142895973	.	+	.	ID=RLOC_00011989;geneIDs=comp145756_c0_seq1.path1;transcripts=comp145756_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142895433	142895973	.	+	.	ID=comp145756_c0_seq1.mrna1;geneID=comp145756_c0_seq1.path1;Name=comp145756_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=536;mismatches=5;indels=0;unknowns=0;Target=comp145756_c0_seq1 541 1 .;CDS_Target=comp145756_c0_seq1 344 69 .;locus=RLOC_00011989
Chr1	stalkie_big_nohaplotig	exon	142895433	142895973	99	+	.	Parent=comp145756_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	142895501	142895776	.	+	0	Parent=comp145756_c0_seq1.mrna1
Chr1	gffcl	locus	142941656	142957730	.	+	.	ID=RLOC_00011990;geneIDs=FBgn0261461.1.path1;transcripts=FBgn0261461.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142941656	142957730	.	+	.	ID=FBgn0261461.1.mrna1;geneID=FBgn0261461.1.path1;Name=FBgn0261461.1;Dir=sensecoverage=100.0;identity=99.1;matches=2340;mismatches=21;indels=0;unknowns=0;locus=RLOC_00011990
Chr1	stalkie_big_nohaplotig	exon	142941656	142943125	99	+	.	Parent=FBgn0261461.1.mrna1;Target=FBgn0261461.1 1 1470 +
Chr1	stalkie_big_nohaplotig	exon	142954228	142954402	99	+	.	Parent=FBgn0261461.1.mrna1;Target=FBgn0261461.1 1471 1645 +
Chr1	stalkie_big_nohaplotig	exon	142956840	142956861	100	+	.	Parent=FBgn0261461.1.mrna1;Target=FBgn0261461.1 1646 1667 +
Chr1	stalkie_big_nohaplotig	exon	142956976	142957491	99	+	.	Parent=FBgn0261461.1.mrna1;Target=FBgn0261461.1 1668 2183 +
Chr1	stalkie_big_nohaplotig	exon	142957553	142957730	97	+	.	Parent=FBgn0261461.1.mrna1;Target=FBgn0261461.1 2184 2361 +
Chr1	stalkie_big_nohaplotig	CDS	142941656	142943125	.	+	0	Parent=FBgn0261461.1.mrna1;Target=FBgn0261461.1 1 1470 +
Chr1	stalkie_big_nohaplotig	CDS	142954228	142954402	.	+	0	Parent=FBgn0261461.1.mrna1;Target=FBgn0261461.1 1471 1645 +
Chr1	stalkie_big_nohaplotig	CDS	142956840	142956861	.	+	2	Parent=FBgn0261461.1.mrna1;Target=FBgn0261461.1 1646 1667 +
Chr1	stalkie_big_nohaplotig	CDS	142956976	142957491	.	+	1	Parent=FBgn0261461.1.mrna1;Target=FBgn0261461.1 1668 2183 +
Chr1	stalkie_big_nohaplotig	CDS	142957553	142957730	.	+	1	Parent=FBgn0261461.1.mrna1;Target=FBgn0261461.1 2184 2361 +
Chr1	gffcl	locus	142954379	142982578	.	-	.	ID=RLOC_00011991;geneIDs=comp159595_c1_seq1.path1;transcripts=comp159595_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142954379	142982578	.	-	.	ID=comp159595_c1_seq1.mrna1;geneID=comp159595_c1_seq1.path1;Name=comp159595_c1_seq1;Dir=indeterminatecoverage=89.8;identity=90.1;matches=1161;mismatches=66;indels=61;unknowns=0;Target=comp159595_c1_seq1 417 364 .;locus=RLOC_00011991
Chr1	stalkie_big_nohaplotig	exon	142954379	142954740	91	-	.	Parent=comp159595_c1_seq1.mrna1;Target=comp159595_c1_seq1 1730 1366 .
Chr1	stalkie_big_nohaplotig	exon	142954812	142954821	100	-	.	Parent=comp159595_c1_seq1.mrna1;Target=comp159595_c1_seq1 1365 1356 .
Chr1	stalkie_big_nohaplotig	exon	142954886	142954963	63	-	.	Parent=comp159595_c1_seq1.mrna1;Target=comp159595_c1_seq1 1149 1051 .
Chr1	stalkie_big_nohaplotig	exon	142955402	142956143	92	-	.	Parent=comp159595_c1_seq1.mrna1;Target=comp159595_c1_seq1 987 215 .
Chr1	stalkie_big_nohaplotig	exon	142965107	142965116	80	-	.	Parent=comp159595_c1_seq1.mrna1;Target=comp159595_c1_seq1 214 205 .
Chr1	stalkie_big_nohaplotig	exon	142972406	142972407	100	-	.	Parent=comp159595_c1_seq1.mrna1;Target=comp159595_c1_seq1 204 203 .
Chr1	stalkie_big_nohaplotig	exon	142976614	142976615	100	-	.	Parent=comp159595_c1_seq1.mrna1;Target=comp159595_c1_seq1 202 201 .
Chr1	stalkie_big_nohaplotig	exon	142982304	142982319	87	-	.	Parent=comp159595_c1_seq1.mrna1;Target=comp159595_c1_seq1 200 185 .
Chr1	stalkie_big_nohaplotig	exon	142982447	142982451	100	-	.	Parent=comp159595_c1_seq1.mrna1;Target=comp159595_c1_seq1 184 180 .
Chr1	stalkie_big_nohaplotig	exon	142982577	142982578	100	-	.	Parent=comp159595_c1_seq1.mrna1;Target=comp159595_c1_seq1 179 178 .
Chr1	stalkie_big_nohaplotig	CDS	142955971	142956024	.	-	0	Parent=comp159595_c1_seq1.mrna1
Chr1	gffcl	locus	142980905	142983359	.	-	.	ID=RLOC_00011992;geneIDs=FBgn0030984.1.path1;transcripts=FBgn0030984.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142980905	142983359	.	-	.	ID=FBgn0030984.1.mrna1;geneID=FBgn0030984.1.path1;Name=FBgn0030984.1;Dir=sensecoverage=100.0;identity=99.6;matches=1111;mismatches=5;indels=0;unknowns=0;locus=RLOC_00011992
Chr1	stalkie_big_nohaplotig	exon	142980905	142981102	98	-	.	Parent=FBgn0030984.1.mrna1;Target=FBgn0030984.1 919 1116 +
Chr1	stalkie_big_nohaplotig	exon	142981188	142981475	99	-	.	Parent=FBgn0030984.1.mrna1;Target=FBgn0030984.1 631 918 +
Chr1	stalkie_big_nohaplotig	exon	142982677	142982779	100	-	.	Parent=FBgn0030984.1.mrna1;Target=FBgn0030984.1 528 630 +
Chr1	stalkie_big_nohaplotig	exon	142982833	142983359	99	-	.	Parent=FBgn0030984.1.mrna1;Target=FBgn0030984.1 1 527 +
Chr1	stalkie_big_nohaplotig	CDS	142980905	142981102	.	-	0	Parent=FBgn0030984.1.mrna1;Target=FBgn0030984.1 919 1116 +
Chr1	stalkie_big_nohaplotig	CDS	142981188	142981475	.	-	0	Parent=FBgn0030984.1.mrna1;Target=FBgn0030984.1 631 918 +
Chr1	stalkie_big_nohaplotig	CDS	142982677	142982779	.	-	1	Parent=FBgn0030984.1.mrna1;Target=FBgn0030984.1 528 630 +
Chr1	stalkie_big_nohaplotig	CDS	142982833	142983359	.	-	0	Parent=FBgn0030984.1.mrna1;Target=FBgn0030984.1 1 527 +
Chr1	gffcl	locus	142989137	142990648	.	+	.	ID=RLOC_00011993;geneIDs=FBgn0037202.2.path1;transcripts=FBgn0037202.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	142989137	142990648	.	+	.	ID=FBgn0037202.2.mrna1;geneID=FBgn0037202.2.path1;Name=FBgn0037202.2;Dir=sensecoverage=100.0;identity=99.1;matches=1243;mismatches=11;indels=0;unknowns=0;locus=RLOC_00011993
Chr1	stalkie_big_nohaplotig	exon	142989137	142989225	98	+	.	Parent=FBgn0037202.2.mrna1;Target=FBgn0037202.2 1 89 +
Chr1	stalkie_big_nohaplotig	exon	142989360	142989561	96	+	.	Parent=FBgn0037202.2.mrna1;Target=FBgn0037202.2 90 291 +
Chr1	stalkie_big_nohaplotig	exon	142989622	142989761	99	+	.	Parent=FBgn0037202.2.mrna1;Target=FBgn0037202.2 292 431 +
Chr1	stalkie_big_nohaplotig	exon	142989826	142990648	99	+	.	Parent=FBgn0037202.2.mrna1;Target=FBgn0037202.2 432 1254 +
Chr1	stalkie_big_nohaplotig	CDS	142989137	142989225	.	+	0	Parent=FBgn0037202.2.mrna1;Target=FBgn0037202.2 1 89 +
Chr1	stalkie_big_nohaplotig	CDS	142989360	142989561	.	+	1	Parent=FBgn0037202.2.mrna1;Target=FBgn0037202.2 90 291 +
Chr1	stalkie_big_nohaplotig	CDS	142989622	142989761	.	+	0	Parent=FBgn0037202.2.mrna1;Target=FBgn0037202.2 292 431 +
Chr1	stalkie_big_nohaplotig	CDS	142989826	142990648	.	+	1	Parent=FBgn0037202.2.mrna1;Target=FBgn0037202.2 432 1254 +
Chr1	gffcl	locus	143027013	143028677	.	-	.	ID=RLOC_00011994;geneIDs=comp155887_c1_seq1.path2;transcripts=comp155887_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	143027013	143028677	.	-	.	ID=comp155887_c1_seq1.mrna2;geneID=comp155887_c1_seq1.path2;Name=comp155887_c1_seq1;Dir=indeterminatecoverage=98.9;identity=99.5;matches=1657;mismatches=8;indels=0;unknowns=0;Target=comp155887_c1_seq1 1681 17 .;CDS_Target=comp155887_c1_seq1 1532 204 .;locus=RLOC_00011994
Chr1	stalkie_big_nohaplotig	exon	143027013	143028677	99	-	.	Parent=comp155887_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	143027162	143028490	.	-	0	Parent=comp155887_c1_seq1.mrna2
Chr1	gffcl	locus	143096399	143107485	.	+	.	ID=RLOC_00011995;geneIDs=FBgn0037205.1.path1;transcripts=FBgn0037205.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143096399	143107485	.	+	.	ID=FBgn0037205.1.mrna1;geneID=FBgn0037205.1.path1;Name=FBgn0037205.1;Dir=sensecoverage=100.0;identity=99.1;matches=6974;mismatches=58;indels=6;unknowns=0;locus=RLOC_00011995
Chr1	stalkie_big_nohaplotig	exon	143096399	143096485	98	+	.	Parent=FBgn0037205.1.mrna1;Target=FBgn0037205.1 1 87 +
Chr1	stalkie_big_nohaplotig	exon	143096631	143096679	100	+	.	Parent=FBgn0037205.1.mrna1;Target=FBgn0037205.1 88 136 +
Chr1	stalkie_big_nohaplotig	exon	143098106	143098860	99	+	.	Parent=FBgn0037205.1.mrna1;Target=FBgn0037205.1 137 891 +
Chr1	stalkie_big_nohaplotig	exon	143098967	143100497	98	+	.	Parent=FBgn0037205.1.mrna1;Target=FBgn0037205.1 892 2428 +
Chr1	stalkie_big_nohaplotig	exon	143100933	143101536	98	+	.	Parent=FBgn0037205.1.mrna1;Target=FBgn0037205.1 2429 3032 +
Chr1	stalkie_big_nohaplotig	exon	143102346	143103660	99	+	.	Parent=FBgn0037205.1.mrna1;Target=FBgn0037205.1 3033 4347 +
Chr1	stalkie_big_nohaplotig	exon	143103729	143104226	99	+	.	Parent=FBgn0037205.1.mrna1;Target=FBgn0037205.1 4348 4845 +
Chr1	stalkie_big_nohaplotig	exon	143105293	143107485	99	+	.	Parent=FBgn0037205.1.mrna1;Target=FBgn0037205.1 4846 7038 +
Chr1	stalkie_big_nohaplotig	CDS	143096640	143096679	.	+	0	Parent=FBgn0037205.1.mrna1;Target=FBgn0037205.1 97 136 +
Chr1	stalkie_big_nohaplotig	CDS	143098106	143098860	.	+	2	Parent=FBgn0037205.1.mrna1;Target=FBgn0037205.1 137 891 +
Chr1	stalkie_big_nohaplotig	CDS	143098967	143100497	.	+	0	Parent=FBgn0037205.1.mrna1;Target=FBgn0037205.1 892 2428 +
Chr1	stalkie_big_nohaplotig	CDS	143100933	143101536	.	+	2	Parent=FBgn0037205.1.mrna1;Target=FBgn0037205.1 2429 3032 +
Chr1	stalkie_big_nohaplotig	CDS	143102346	143103660	.	+	1	Parent=FBgn0037205.1.mrna1;Target=FBgn0037205.1 3033 4347 +
Chr1	stalkie_big_nohaplotig	CDS	143103729	143104226	.	+	0	Parent=FBgn0037205.1.mrna1;Target=FBgn0037205.1 4348 4845 +
Chr1	stalkie_big_nohaplotig	CDS	143105293	143107485	.	+	0	Parent=FBgn0037205.1.mrna1;Target=FBgn0037205.1 4846 7038 +
Chr1	gffcl	locus	143146840	143147790	.	+	.	ID=RLOC_00011996;geneIDs=comp146187_c0_seq1.path1;transcripts=comp146187_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143146840	143147790	.	+	.	ID=comp146187_c0_seq1.mrna1;geneID=comp146187_c0_seq1.path1;Name=comp146187_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=943;mismatches=7;indels=4;unknowns=0;Target=comp146187_c0_seq1 953 1 .;CDS_Target=comp146187_c0_seq1 755 675 .;locus=RLOC_00011996
Chr1	stalkie_big_nohaplotig	exon	143146840	143147790	98	+	.	Parent=comp146187_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	143147514	143147592	.	+	0	Parent=comp146187_c0_seq1.mrna1
Chr1	gffcl	locus	143172815	143245493	.	-	.	ID=RLOC_00011997;geneIDs=comp158614_c0_seq1.path1;transcripts=comp158614_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143172815	143245493	.	-	.	ID=comp158614_c0_seq1.mrna1;geneID=comp158614_c0_seq1.path1;Name=comp158614_c0_seq1;Dir=indeterminatecoverage=93.5;identity=98.7;matches=973;mismatches=8;indels=5;unknowns=0;Target=comp158614_c0_seq1 560 405 .;locus=RLOC_00011997
Chr1	stalkie_big_nohaplotig	exon	143172815	143173786	98	-	.	Parent=comp158614_c0_seq1.mrna1;Target=comp158614_c0_seq1 1045 71 .
Chr1	stalkie_big_nohaplotig	exon	143245484	143245493	100	-	.	Parent=comp158614_c0_seq1.mrna1;Target=comp158614_c0_seq1 70 61 .
Chr1	stalkie_big_nohaplotig	CDS	143173301	143173452	.	-	0	Parent=comp158614_c0_seq1.mrna1
Chr1	gffcl	locus	143182424	143186388	.	+	.	ID=RLOC_00011998;geneIDs=comp155177_c0_seq1.path1;transcripts=comp155177_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143182424	143186388	.	+	.	ID=comp155177_c0_seq1.mrna1;geneID=comp155177_c0_seq1.path1;Name=comp155177_c0_seq1;Dir=antisensecoverage=77.5;identity=96.7;matches=1190;mismatches=9;indels=31;unknowns=0;locus=RLOC_00011998
Chr1	stalkie_big_nohaplotig	exon	143182424	143182491	100	+	.	Parent=comp155177_c0_seq1.mrna1;Target=comp155177_c0_seq1 1476 1543 -
Chr1	stalkie_big_nohaplotig	exon	143182588	143182661	100	+	.	Parent=comp155177_c0_seq1.mrna1;Target=comp155177_c0_seq1 1402 1475 -
Chr1	stalkie_big_nohaplotig	exon	143183375	143183438	100	+	.	Parent=comp155177_c0_seq1.mrna1;Target=comp155177_c0_seq1 1338 1401 -
Chr1	stalkie_big_nohaplotig	exon	143183501	143183581	98	+	.	Parent=comp155177_c0_seq1.mrna1;Target=comp155177_c0_seq1 1257 1337 -
Chr1	stalkie_big_nohaplotig	exon	143185237	143185357	98	+	.	Parent=comp155177_c0_seq1.mrna1;Target=comp155177_c0_seq1 1136 1256 -
Chr1	stalkie_big_nohaplotig	exon	143185413	143185617	100	+	.	Parent=comp155177_c0_seq1.mrna1;Target=comp155177_c0_seq1 931 1135 -
Chr1	stalkie_big_nohaplotig	exon	143185683	143186045	99	+	.	Parent=comp155177_c0_seq1.mrna1;Target=comp155177_c0_seq1 568 930 -
Chr1	stalkie_big_nohaplotig	exon	143186135	143186388	86	+	.	Parent=comp155177_c0_seq1.mrna1;Target=comp155177_c0_seq1 345 567 -
Chr1	stalkie_big_nohaplotig	CDS	143185417	143185617	.	+	0	Parent=comp155177_c0_seq1.mrna1;Target=comp155177_c0_seq1 931 1131 .
Chr1	stalkie_big_nohaplotig	CDS	143185683	143186045	.	+	0	Parent=comp155177_c0_seq1.mrna1;Target=comp155177_c0_seq1 568 930 .
Chr1	stalkie_big_nohaplotig	CDS	143186135	143186227	.	+	0	Parent=comp155177_c0_seq1.mrna1;Target=comp155177_c0_seq1 475 567 .
Chr1	gffcl	locus	143245798	143246733	.	.	.	ID=RLOC_00011999;geneIDs=comp93875_c0_seq1.path1,comp144384_c0_seq1.path1;transcripts=comp144384_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143245964	143246733	.	-	.	ID=comp144384_c0_seq1.mrna1;geneID=comp144384_c0_seq1.path1;Name=comp144384_c0_seq1;Dir=indeterminatecoverage=95.8;identity=98.7;matches=760;mismatches=2;indels=8;unknowns=0;Target=comp144384_c0_seq1 771 10 .;CDS_Target=comp144384_c0_seq1 226 137 .;locus=RLOC_00011999
Chr1	stalkie_big_nohaplotig	exon	143245964	143246733	98	-	.	Parent=comp144384_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	143246517	143246606	.	-	0	Parent=comp144384_c0_seq1.mrna1
Chr1	gffcl	locus	143267562	143269457	.	-	.	ID=RLOC_00012000;geneIDs=FBgn0264090.1.path1;transcripts=FBgn0264090.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143267562	143269457	.	-	.	ID=FBgn0264090.1.mrna1;geneID=FBgn0264090.1.path1;Name=FBgn0264090.1;Dir=sensecoverage=100.0;identity=99.4;matches=1807;mismatches=11;indels=0;unknowns=0;locus=RLOC_00012000
Chr1	stalkie_big_nohaplotig	exon	143267562	143268869	99	-	.	Parent=FBgn0264090.1.mrna1;Target=FBgn0264090.1 511 1818 +
Chr1	stalkie_big_nohaplotig	exon	143268948	143269457	99	-	.	Parent=FBgn0264090.1.mrna1;Target=FBgn0264090.1 1 510 +
Chr1	stalkie_big_nohaplotig	CDS	143267562	143268869	.	-	0	Parent=FBgn0264090.1.mrna1;Target=FBgn0264090.1 511 1818 +
Chr1	stalkie_big_nohaplotig	CDS	143268948	143269457	.	-	0	Parent=FBgn0264090.1.mrna1;Target=FBgn0264090.1 1 510 +
Chr1	gffcl	locus	143509721	143512595	.	-	.	ID=RLOC_00012002;geneIDs=comp155266_c0_seq1.path1;transcripts=comp155266_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143509721	143512595	.	-	.	ID=comp155266_c0_seq1.mrna1;geneID=comp155266_c0_seq1.path1;Name=comp155266_c0_seq1;Dir=sensecoverage=98.6;identity=99.1;matches=1109;mismatches=9;indels=1;unknowns=0;locus=RLOC_00012002
Chr1	stalkie_big_nohaplotig	exon	143509721	143510029	97	-	.	Parent=comp155266_c0_seq1.mrna1;Target=comp155266_c0_seq1 827 1135 +
Chr1	stalkie_big_nohaplotig	exon	143510115	143510465	99	-	.	Parent=comp155266_c0_seq1.mrna1;Target=comp155266_c0_seq1 476 826 +
Chr1	stalkie_big_nohaplotig	exon	143510546	143510786	100	-	.	Parent=comp155266_c0_seq1.mrna1;Target=comp155266_c0_seq1 235 475 +
Chr1	stalkie_big_nohaplotig	exon	143512241	143512381	99	-	.	Parent=comp155266_c0_seq1.mrna1;Target=comp155266_c0_seq1 93 234 +
Chr1	stalkie_big_nohaplotig	exon	143512520	143512595	100	-	.	Parent=comp155266_c0_seq1.mrna1;Target=comp155266_c0_seq1 17 92 +
Chr1	stalkie_big_nohaplotig	CDS	143509934	143510029	.	-	0	Parent=comp155266_c0_seq1.mrna1;Target=comp155266_c0_seq1 827 922 +
Chr1	stalkie_big_nohaplotig	CDS	143510115	143510465	.	-	0	Parent=comp155266_c0_seq1.mrna1;Target=comp155266_c0_seq1 476 826 +
Chr1	stalkie_big_nohaplotig	CDS	143510546	143510782	.	-	0	Parent=comp155266_c0_seq1.mrna1;Target=comp155266_c0_seq1 239 475 +
Chr1	gffcl	locus	143586764	143587961	.	-	.	ID=RLOC_00012003;geneIDs=comp150836_c0_seq1.path1;transcripts=comp150836_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143586764	143587961	.	-	.	ID=comp150836_c0_seq1.mrna1;geneID=comp150836_c0_seq1.path1;Name=comp150836_c0_seq1;Dir=indeterminatecoverage=100.0;identity=89.5;matches=1150;mismatches=48;indels=87;unknowns=0;Target=comp150836_c0_seq1 1285 1 .;CDS_Target=comp150836_c0_seq1 1100 924 .;locus=RLOC_00012003
Chr1	stalkie_big_nohaplotig	exon	143586764	143587961	89	-	.	Parent=comp150836_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	143586949	143587125	.	-	0	Parent=comp150836_c0_seq1.mrna1
Chr1	gffcl	locus	143596669	143601579	.	+	.	ID=RLOC_00012004;geneIDs=ORF1.path1;transcripts=ORF1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143596669	143601579	.	+	.	ID=ORF1.mrna1;geneID=ORF1.path1;Name=ORF1;Dir=indeterminatecoverage=79.7;identity=99.1;matches=4871;mismatches=39;indels=7;unknowns=0;Target=ORF1 6387 2668 .;locus=RLOC_00012004
Chr1	stalkie_big_nohaplotig	exon	143596669	143597818	98	+	.	Parent=ORF1.mrna1;Target=ORF1 2446 1296 .
Chr1	stalkie_big_nohaplotig	exon	143597820	143601579	99	+	.	Parent=ORF1.mrna1;Target=ORF1 6387 2622 .
Chr1	stalkie_big_nohaplotig	CDS	143597866	143601579	.	+	0	Parent=ORF1.mrna1
Chr1	gffcl	locus	143603040	143604189	.	+	.	ID=RLOC_00012005;geneIDs=comp160154_c1_seq1.path1;transcripts=comp160154_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143603040	143604189	.	+	.	ID=comp160154_c1_seq1.mrna1;geneID=comp160154_c1_seq1.path1;Name=comp160154_c1_seq1;Dir=sensecoverage=98.3;identity=99.1;matches=808;mismatches=5;indels=2;unknowns=0;locus=RLOC_00012005
Chr1	stalkie_big_nohaplotig	exon	143603040	143603270	98	+	.	Parent=comp160154_c1_seq1.mrna1;Target=comp160154_c1_seq1 15 243 +
Chr1	stalkie_big_nohaplotig	exon	143603348	143603581	99	+	.	Parent=comp160154_c1_seq1.mrna1;Target=comp160154_c1_seq1 244 477 +
Chr1	stalkie_big_nohaplotig	exon	143603701	143603871	99	+	.	Parent=comp160154_c1_seq1.mrna1;Target=comp160154_c1_seq1 478 648 +
Chr1	stalkie_big_nohaplotig	exon	143603959	143604003	100	+	.	Parent=comp160154_c1_seq1.mrna1;Target=comp160154_c1_seq1 649 693 +
Chr1	stalkie_big_nohaplotig	exon	143604056	143604189	99	+	.	Parent=comp160154_c1_seq1.mrna1;Target=comp160154_c1_seq1 694 827 +
Chr1	stalkie_big_nohaplotig	CDS	143603174	143603270	.	+	0	Parent=comp160154_c1_seq1.mrna1;Target=comp160154_c1_seq1 147 243 +
Chr1	stalkie_big_nohaplotig	CDS	143603348	143603581	.	+	2	Parent=comp160154_c1_seq1.mrna1;Target=comp160154_c1_seq1 244 477 +
Chr1	stalkie_big_nohaplotig	CDS	143603701	143603871	.	+	2	Parent=comp160154_c1_seq1.mrna1;Target=comp160154_c1_seq1 478 648 +
Chr1	stalkie_big_nohaplotig	CDS	143603959	143604003	.	+	2	Parent=comp160154_c1_seq1.mrna1;Target=comp160154_c1_seq1 649 693 +
Chr1	stalkie_big_nohaplotig	CDS	143604056	143604189	.	+	2	Parent=comp160154_c1_seq1.mrna1;Target=comp160154_c1_seq1 694 827 +
Chr1	gffcl	locus	143605177	143605770	.	+	.	ID=RLOC_00012006;geneIDs=FBgn0014028.2.path1;transcripts=FBgn0014028.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143605177	143605770	.	+	.	ID=FBgn0014028.2.mrna1;geneID=FBgn0014028.2.path1;Name=FBgn0014028.2;Dir=indeterminatecoverage=100.0;identity=99.7;matches=592;mismatches=2;indels=0;unknowns=0;Target=FBgn0014028.2 594 1 .;locus=RLOC_00012006
Chr1	stalkie_big_nohaplotig	exon	143605177	143605770	99	+	.	Parent=FBgn0014028.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	143605177	143605770	.	+	0	Parent=FBgn0014028.2.mrna1
Chr1	gffcl	locus	143621113	143621639	.	-	.	ID=RLOC_00012007;geneIDs=comp112995_c0_seq1.path1;transcripts=comp112995_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143621113	143621639	.	-	.	ID=comp112995_c0_seq1.mrna1;geneID=comp112995_c0_seq1.path1;Name=comp112995_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=523;mismatches=4;indels=0;unknowns=0;Target=comp112995_c0_seq1 527 1 .;CDS_Target=comp112995_c0_seq1 445 359 .;locus=RLOC_00012007
Chr1	stalkie_big_nohaplotig	exon	143621113	143621639	99	-	.	Parent=comp112995_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	143621195	143621281	.	-	0	Parent=comp112995_c0_seq1.mrna1
Chr1	gffcl	locus	143626431	143631812	.	+	.	ID=RLOC_00012008;geneIDs=FBgn0030976.1.path1,comp150836_c0_seq1.path2;transcripts=FBgn0030976.1.mrna1,comp150836_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	143626431	143631812	.	+	.	ID=FBgn0030976.1.mrna1;geneID=FBgn0030976.1.path1;Name=FBgn0030976.1;Dir=sensecoverage=91.0;identity=99.7;matches=653;mismatches=1;indels=1;unknowns=0;locus=RLOC_00012008
Chr1	stalkie_big_nohaplotig	exon	143626431	143626490	100	+	.	Parent=FBgn0030976.1.mrna1;Target=FBgn0030976.1 66 125 +
Chr1	stalkie_big_nohaplotig	exon	143630712	143630875	100	+	.	Parent=FBgn0030976.1.mrna1;Target=FBgn0030976.1 126 289 +
Chr1	stalkie_big_nohaplotig	exon	143630959	143631087	99	+	.	Parent=FBgn0030976.1.mrna1;Target=FBgn0030976.1 290 419 +
Chr1	stalkie_big_nohaplotig	exon	143631446	143631543	98	+	.	Parent=FBgn0030976.1.mrna1;Target=FBgn0030976.1 420 517 +
Chr1	stalkie_big_nohaplotig	exon	143631610	143631812	100	+	.	Parent=FBgn0030976.1.mrna1;Target=FBgn0030976.1 518 720 +
Chr1	stalkie_big_nohaplotig	CDS	143626431	143626490	.	+	0	Parent=FBgn0030976.1.mrna1;Target=FBgn0030976.1 66 125 +
Chr1	stalkie_big_nohaplotig	CDS	143630712	143630875	.	+	0	Parent=FBgn0030976.1.mrna1;Target=FBgn0030976.1 126 289 +
Chr1	stalkie_big_nohaplotig	CDS	143630959	143630976	.	+	1	Parent=FBgn0030976.1.mrna1;Target=FBgn0030976.1 290 308 +
Chr1	stalkie_big_nohaplotig	mRNA	143629535	143630732	.	+	.	ID=comp150836_c0_seq1.mrna2;geneID=comp150836_c0_seq1.path2;Name=comp150836_c0_seq1;Dir=indeterminatecoverage=100.0;identity=89.5;matches=1150;mismatches=48;indels=87;unknowns=0;Target=comp150836_c0_seq1 1285 1 .;CDS_Target=comp150836_c0_seq1 1100 924 .;locus=RLOC_00012008
Chr1	stalkie_big_nohaplotig	exon	143629535	143630732	89	+	.	Parent=comp150836_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	143630371	143630547	.	+	0	Parent=comp150836_c0_seq1.mrna2
Chr1	gffcl	locus	143627236	143699426	.	-	.	ID=RLOC_00012009;geneIDs=comp143152_c0_seq1.path1;transcripts=comp143152_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143627236	143699426	.	-	.	ID=comp143152_c0_seq1.mrna1;geneID=comp143152_c0_seq1.path1;Name=comp143152_c0_seq1;Dir=indeterminatecoverage=63.8;identity=98.1;matches=523;mismatches=1;indels=9;unknowns=0;Target=comp143152_c0_seq1 171 22 .;locus=RLOC_00012009
Chr1	stalkie_big_nohaplotig	exon	143627236	143627248	100	-	.	Parent=comp143152_c0_seq1.mrna1;Target=comp143152_c0_seq1 572 560 .
Chr1	stalkie_big_nohaplotig	exon	143633057	143633060	100	-	.	Parent=comp143152_c0_seq1.mrna1;Target=comp143152_c0_seq1 559 556 .
Chr1	stalkie_big_nohaplotig	exon	143643393	143643405	30	-	.	Parent=comp143152_c0_seq1.mrna1;Target=comp143152_c0_seq1 555 552 .
Chr1	stalkie_big_nohaplotig	exon	143656250	143656256	100	-	.	Parent=comp143152_c0_seq1.mrna1;Target=comp143152_c0_seq1 551 545 .
Chr1	stalkie_big_nohaplotig	exon	143663383	143663391	100	-	.	Parent=comp143152_c0_seq1.mrna1;Target=comp143152_c0_seq1 544 536 .
Chr1	stalkie_big_nohaplotig	exon	143663751	143663754	100	-	.	Parent=comp143152_c0_seq1.mrna1;Target=comp143152_c0_seq1 535 532 .
Chr1	stalkie_big_nohaplotig	exon	143668709	143668710	100	-	.	Parent=comp143152_c0_seq1.mrna1;Target=comp143152_c0_seq1 531 530 .
Chr1	stalkie_big_nohaplotig	exon	143684476	143684480	100	-	.	Parent=comp143152_c0_seq1.mrna1;Target=comp143152_c0_seq1 528 524 .
Chr1	stalkie_big_nohaplotig	exon	143696824	143696828	100	-	.	Parent=comp143152_c0_seq1.mrna1;Target=comp143152_c0_seq1 522 518 .
Chr1	stalkie_big_nohaplotig	exon	143698923	143698927	100	-	.	Parent=comp143152_c0_seq1.mrna1;Target=comp143152_c0_seq1 517 513 .
Chr1	stalkie_big_nohaplotig	exon	143698963	143699426	99	-	.	Parent=comp143152_c0_seq1.mrna1;Target=comp143152_c0_seq1 484 21 .
Chr1	stalkie_big_nohaplotig	CDS	143699276	143699425	.	-	0	Parent=comp143152_c0_seq1.mrna1
Chr1	gffcl	locus	143654914	144381236	.	-	.	ID=RLOC_00012010;geneIDs=FBgn0038986.2.path1,FBgn0038986.3.path1;transcripts=FBgn0038986.3.mrna1,FBgn0038986.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143654914	144381236	.	-	.	ID=FBgn0038986.3.mrna1;geneID=FBgn0038986.3.path1;Name=FBgn0038986.3;Dir=sensecoverage=95.4;identity=81.9;matches=690;mismatches=75;indels=77;unknowns=0;locus=RLOC_00012010
Chr1	stalkie_big_nohaplotig	exon	143654914	143654920	100	-	.	Parent=FBgn0038986.3.mrna1;Target=FBgn0038986.3 795 801 +
Chr1	stalkie_big_nohaplotig	exon	143659359	143659423	29	-	.	Parent=FBgn0038986.3.mrna1;Target=FBgn0038986.3 771 789 +
Chr1	stalkie_big_nohaplotig	exon	143660002	143660003	100	-	.	Parent=FBgn0038986.3.mrna1;Target=FBgn0038986.3 769 770 +
Chr1	stalkie_big_nohaplotig	exon	143661699	143661704	100	-	.	Parent=FBgn0038986.3.mrna1;Target=FBgn0038986.3 763 768 +
Chr1	stalkie_big_nohaplotig	exon	143663113	143663139	39	-	.	Parent=FBgn0038986.3.mrna1;Target=FBgn0038986.3 705 762 +
Chr1	stalkie_big_nohaplotig	exon	143671715	143671724	100	-	.	Parent=FBgn0038986.3.mrna1;Target=FBgn0038986.3 695 704 +
Chr1	stalkie_big_nohaplotig	exon	144372809	144372909	92	-	.	Parent=FBgn0038986.3.mrna1;Target=FBgn0038986.3 594 694 +
Chr1	stalkie_big_nohaplotig	exon	144378193	144378512	80	-	.	Parent=FBgn0038986.3.mrna1;Target=FBgn0038986.3 274 593 +
Chr1	stalkie_big_nohaplotig	exon	144378573	144378760	100	-	.	Parent=FBgn0038986.3.mrna1;Target=FBgn0038986.3 86 273 +
Chr1	stalkie_big_nohaplotig	exon	144381152	144381236	100	-	.	Parent=FBgn0038986.3.mrna1;Target=FBgn0038986.3 1 85 +
Chr1	stalkie_big_nohaplotig	CDS	143654914	143654920	.	-	0	Parent=FBgn0038986.3.mrna1;Target=FBgn0038986.3 795 801 +
Chr1	stalkie_big_nohaplotig	CDS	143659359	143659423	.	-	2	Parent=FBgn0038986.3.mrna1;Target=FBgn0038986.3 771 789 +
Chr1	stalkie_big_nohaplotig	CDS	143660002	143660003	.	-	1	Parent=FBgn0038986.3.mrna1;Target=FBgn0038986.3 769 770 +
Chr1	stalkie_big_nohaplotig	CDS	143661699	143661704	.	-	1	Parent=FBgn0038986.3.mrna1;Target=FBgn0038986.3 763 768 +
Chr1	stalkie_big_nohaplotig	CDS	143663113	143663139	.	-	1	Parent=FBgn0038986.3.mrna1;Target=FBgn0038986.3 705 762 +
Chr1	stalkie_big_nohaplotig	CDS	143671715	143671724	.	-	2	Parent=FBgn0038986.3.mrna1;Target=FBgn0038986.3 695 704 +
Chr1	stalkie_big_nohaplotig	CDS	144372809	144372909	.	-	1	Parent=FBgn0038986.3.mrna1;Target=FBgn0038986.3 594 694 +
Chr1	stalkie_big_nohaplotig	CDS	144378193	144378512	.	-	0	Parent=FBgn0038986.3.mrna1;Target=FBgn0038986.3 274 593 +
Chr1	stalkie_big_nohaplotig	CDS	144378573	144378760	.	-	2	Parent=FBgn0038986.3.mrna1;Target=FBgn0038986.3 86 273 +
Chr1	stalkie_big_nohaplotig	CDS	144381152	144381236	.	-	0	Parent=FBgn0038986.3.mrna1;Target=FBgn0038986.3 1 85 +
Chr1	stalkie_big_nohaplotig	mRNA	144377951	144381236	.	-	.	ID=FBgn0038986.2.mrna1;geneID=FBgn0038986.2.path1;Name=FBgn0038986.2;Dir=indeterminatecoverage=99.4;identity=99.6;matches=832;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012010
Chr1	stalkie_big_nohaplotig	exon	144377951	144378512	99	-	.	Parent=FBgn0038986.2.mrna1;Target=FBgn0038986.2 835 274 .
Chr1	stalkie_big_nohaplotig	exon	144378573	144378760	100	-	.	Parent=FBgn0038986.2.mrna1;Target=FBgn0038986.2 273 86 .
Chr1	stalkie_big_nohaplotig	exon	144381152	144381236	100	-	.	Parent=FBgn0038986.2.mrna1;Target=FBgn0038986.2 85 1 .
Chr1	stalkie_big_nohaplotig	CDS	144377952	144378512	.	-	0	Parent=FBgn0038986.2.mrna1;Target=FBgn0038986.2 834 274 .
Chr1	stalkie_big_nohaplotig	CDS	144378573	144378760	.	-	2	Parent=FBgn0038986.2.mrna1;Target=FBgn0038986.2 273 86 .
Chr1	stalkie_big_nohaplotig	CDS	144381152	144381236	.	-	0	Parent=FBgn0038986.2.mrna1;Target=FBgn0038986.2 85 1 .
Chr1	gffcl	locus	143679480	143680514	.	+	.	ID=RLOC_00012011;geneIDs=FBgn0030792.1.path1;transcripts=FBgn0030792.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143679480	143680514	.	+	.	ID=FBgn0030792.1.mrna1;geneID=FBgn0030792.1.path1;Name=FBgn0030792.1;Dir=sensecoverage=100.0;identity=98.6;matches=870;mismatches=12;indels=0;unknowns=0;locus=RLOC_00012011
Chr1	stalkie_big_nohaplotig	exon	143679480	143679597	96	+	.	Parent=FBgn0030792.1.mrna1;Target=FBgn0030792.1 1 118 +
Chr1	stalkie_big_nohaplotig	exon	143679675	143680151	98	+	.	Parent=FBgn0030792.1.mrna1;Target=FBgn0030792.1 119 595 +
Chr1	stalkie_big_nohaplotig	exon	143680228	143680514	99	+	.	Parent=FBgn0030792.1.mrna1;Target=FBgn0030792.1 596 882 +
Chr1	stalkie_big_nohaplotig	CDS	143679480	143679597	.	+	0	Parent=FBgn0030792.1.mrna1;Target=FBgn0030792.1 1 118 +
Chr1	stalkie_big_nohaplotig	CDS	143679675	143680151	.	+	2	Parent=FBgn0030792.1.mrna1;Target=FBgn0030792.1 119 595 +
Chr1	stalkie_big_nohaplotig	CDS	143680228	143680514	.	+	2	Parent=FBgn0030792.1.mrna1;Target=FBgn0030792.1 596 882 +
Chr1	gffcl	locus	143680624	143681195	.	-	.	ID=RLOC_00012012;geneIDs=FBgn0031459.1.path1;transcripts=FBgn0031459.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143680624	143681195	.	-	.	ID=FBgn0031459.1.mrna1;geneID=FBgn0031459.1.path1;Name=FBgn0031459.1;Dir=sensecoverage=100.0;identity=98.4;matches=443;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012012
Chr1	stalkie_big_nohaplotig	exon	143680624	143680890	97	-	.	Parent=FBgn0031459.1.mrna1;Target=FBgn0031459.1 184 450 +
Chr1	stalkie_big_nohaplotig	exon	143680956	143681088	100	-	.	Parent=FBgn0031459.1.mrna1;Target=FBgn0031459.1 51 183 +
Chr1	stalkie_big_nohaplotig	exon	143681146	143681195	98	-	.	Parent=FBgn0031459.1.mrna1;Target=FBgn0031459.1 1 50 +
Chr1	stalkie_big_nohaplotig	CDS	143680624	143680890	.	-	0	Parent=FBgn0031459.1.mrna1;Target=FBgn0031459.1 184 450 +
Chr1	stalkie_big_nohaplotig	CDS	143680956	143681088	.	-	1	Parent=FBgn0031459.1.mrna1;Target=FBgn0031459.1 51 183 +
Chr1	stalkie_big_nohaplotig	CDS	143681146	143681195	.	-	0	Parent=FBgn0031459.1.mrna1;Target=FBgn0031459.1 1 50 +
Chr1	gffcl	locus	143681810	143683859	.	+	.	ID=RLOC_00012013;geneIDs=FBgn0031098.1.path1;transcripts=FBgn0031098.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143681810	143683859	.	+	.	ID=FBgn0031098.1.mrna1;geneID=FBgn0031098.1.path1;Name=FBgn0031098.1;Dir=sensecoverage=100.0;identity=99.5;matches=1850;mismatches=10;indels=0;unknowns=0;locus=RLOC_00012013
Chr1	stalkie_big_nohaplotig	exon	143681810	143682080	100	+	.	Parent=FBgn0031098.1.mrna1;Target=FBgn0031098.1 1 271 +
Chr1	stalkie_big_nohaplotig	exon	143682138	143682352	98	+	.	Parent=FBgn0031098.1.mrna1;Target=FBgn0031098.1 272 486 +
Chr1	stalkie_big_nohaplotig	exon	143682413	143683394	99	+	.	Parent=FBgn0031098.1.mrna1;Target=FBgn0031098.1 487 1468 +
Chr1	stalkie_big_nohaplotig	exon	143683468	143683859	100	+	.	Parent=FBgn0031098.1.mrna1;Target=FBgn0031098.1 1469 1860 +
Chr1	stalkie_big_nohaplotig	CDS	143681810	143682080	.	+	0	Parent=FBgn0031098.1.mrna1;Target=FBgn0031098.1 1 271 +
Chr1	stalkie_big_nohaplotig	CDS	143682138	143682352	.	+	2	Parent=FBgn0031098.1.mrna1;Target=FBgn0031098.1 272 486 +
Chr1	stalkie_big_nohaplotig	CDS	143682413	143683394	.	+	0	Parent=FBgn0031098.1.mrna1;Target=FBgn0031098.1 487 1468 +
Chr1	stalkie_big_nohaplotig	CDS	143683468	143683859	.	+	2	Parent=FBgn0031098.1.mrna1;Target=FBgn0031098.1 1469 1860 +
Chr1	gffcl	locus	143684594	143685643	.	-	.	ID=RLOC_00012014;geneIDs=FBgn0022770.1.path1;transcripts=FBgn0022770.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143684594	143685643	.	-	.	ID=FBgn0022770.1.mrna1;geneID=FBgn0022770.1.path1;Name=FBgn0022770.1;Dir=sensecoverage=91.3;identity=99.5;matches=635;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012014
Chr1	stalkie_big_nohaplotig	exon	143684594	143684820	100	-	.	Parent=FBgn0022770.1.mrna1;Target=FBgn0022770.1 473 699 +
Chr1	stalkie_big_nohaplotig	exon	143685172	143685366	98	-	.	Parent=FBgn0022770.1.mrna1;Target=FBgn0022770.1 278 472 +
Chr1	stalkie_big_nohaplotig	exon	143685428	143685643	100	-	.	Parent=FBgn0022770.1.mrna1;Target=FBgn0022770.1 62 277 +
Chr1	stalkie_big_nohaplotig	CDS	143684594	143684820	.	-	2	Parent=FBgn0022770.1.mrna1;Target=FBgn0022770.1 473 699 +
Chr1	stalkie_big_nohaplotig	CDS	143685172	143685366	.	-	2	Parent=FBgn0022770.1.mrna1;Target=FBgn0022770.1 278 472 +
Chr1	stalkie_big_nohaplotig	CDS	143685428	143685641	.	-	0	Parent=FBgn0022770.1.mrna1;Target=FBgn0022770.1 64 277 +
Chr1	gffcl	locus	143705490	143712336	.	-	.	ID=RLOC_00012015;geneIDs=FBgn0031097.1.path1;transcripts=FBgn0031097.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143705490	143712336	.	-	.	ID=FBgn0031097.1.mrna1;geneID=FBgn0031097.1.path1;Name=FBgn0031097.1;Dir=sensecoverage=100.0;identity=99.6;matches=747;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012015
Chr1	stalkie_big_nohaplotig	exon	143705490	143705743	100	-	.	Parent=FBgn0031097.1.mrna1;Target=FBgn0031097.1 497 750 +
Chr1	stalkie_big_nohaplotig	exon	143705921	143706124	98	-	.	Parent=FBgn0031097.1.mrna1;Target=FBgn0031097.1 293 496 +
Chr1	stalkie_big_nohaplotig	exon	143706210	143706401	100	-	.	Parent=FBgn0031097.1.mrna1;Target=FBgn0031097.1 101 292 +
Chr1	stalkie_big_nohaplotig	exon	143712237	143712336	100	-	.	Parent=FBgn0031097.1.mrna1;Target=FBgn0031097.1 1 100 +
Chr1	stalkie_big_nohaplotig	CDS	143705490	143705743	.	-	2	Parent=FBgn0031097.1.mrna1;Target=FBgn0031097.1 497 750 +
Chr1	stalkie_big_nohaplotig	CDS	143705921	143706124	.	-	2	Parent=FBgn0031097.1.mrna1;Target=FBgn0031097.1 293 496 +
Chr1	stalkie_big_nohaplotig	CDS	143706210	143706401	.	-	2	Parent=FBgn0031097.1.mrna1;Target=FBgn0031097.1 101 292 +
Chr1	stalkie_big_nohaplotig	CDS	143712237	143712336	.	-	0	Parent=FBgn0031097.1.mrna1;Target=FBgn0031097.1 1 100 +
Chr1	gffcl	locus	143724552	143730613	.	-	.	ID=RLOC_00012016;geneIDs=FBgn0035799.1.path1;transcripts=FBgn0035799.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143724552	143730613	.	-	.	ID=FBgn0035799.1.mrna1;geneID=FBgn0035799.1.path1;Name=FBgn0035799.1;Dir=sensecoverage=99.9;identity=99.7;matches=2597;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012016
Chr1	stalkie_big_nohaplotig	exon	143724552	143724659	100	-	.	Parent=FBgn0035799.1.mrna1;Target=FBgn0035799.1 2497 2604 +
Chr1	stalkie_big_nohaplotig	exon	143724723	143724898	100	-	.	Parent=FBgn0035799.1.mrna1;Target=FBgn0035799.1 2321 2496 +
Chr1	stalkie_big_nohaplotig	exon	143726126	143727220	99	-	.	Parent=FBgn0035799.1.mrna1;Target=FBgn0035799.1 1226 2320 +
Chr1	stalkie_big_nohaplotig	exon	143727290	143727342	100	-	.	Parent=FBgn0035799.1.mrna1;Target=FBgn0035799.1 1173 1225 +
Chr1	stalkie_big_nohaplotig	exon	143727416	143727553	100	-	.	Parent=FBgn0035799.1.mrna1;Target=FBgn0035799.1 1035 1172 +
Chr1	stalkie_big_nohaplotig	exon	143728064	143728223	99	-	.	Parent=FBgn0035799.1.mrna1;Target=FBgn0035799.1 875 1034 +
Chr1	stalkie_big_nohaplotig	exon	143729218	143729885	99	-	.	Parent=FBgn0035799.1.mrna1;Target=FBgn0035799.1 207 874 +
Chr1	stalkie_big_nohaplotig	exon	143729959	143730093	100	-	.	Parent=FBgn0035799.1.mrna1;Target=FBgn0035799.1 72 206 +
Chr1	stalkie_big_nohaplotig	exon	143730543	143730613	100	-	.	Parent=FBgn0035799.1.mrna1;Target=FBgn0035799.1 1 71 +
Chr1	stalkie_big_nohaplotig	CDS	143724552	143724659	.	-	0	Parent=FBgn0035799.1.mrna1;Target=FBgn0035799.1 2497 2604 +
Chr1	stalkie_big_nohaplotig	CDS	143724723	143724898	.	-	2	Parent=FBgn0035799.1.mrna1;Target=FBgn0035799.1 2321 2496 +
Chr1	stalkie_big_nohaplotig	CDS	143726126	143727220	.	-	2	Parent=FBgn0035799.1.mrna1;Target=FBgn0035799.1 1226 2320 +
Chr1	stalkie_big_nohaplotig	CDS	143727290	143727342	.	-	1	Parent=FBgn0035799.1.mrna1;Target=FBgn0035799.1 1173 1225 +
Chr1	stalkie_big_nohaplotig	CDS	143727416	143727553	.	-	1	Parent=FBgn0035799.1.mrna1;Target=FBgn0035799.1 1035 1172 +
Chr1	stalkie_big_nohaplotig	CDS	143728064	143728223	.	-	2	Parent=FBgn0035799.1.mrna1;Target=FBgn0035799.1 875 1034 +
Chr1	stalkie_big_nohaplotig	CDS	143729218	143729885	.	-	1	Parent=FBgn0035799.1.mrna1;Target=FBgn0035799.1 207 874 +
Chr1	stalkie_big_nohaplotig	CDS	143729959	143730093	.	-	1	Parent=FBgn0035799.1.mrna1;Target=FBgn0035799.1 72 206 +
Chr1	stalkie_big_nohaplotig	CDS	143730543	143730613	.	-	0	Parent=FBgn0035799.1.mrna1;Target=FBgn0035799.1 1 71 +
Chr1	gffcl	locus	143732637	143749013	.	+	.	ID=RLOC_00012017;geneIDs=FBgn0003654.1.path1;transcripts=FBgn0003654.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143732637	143749013	.	+	.	ID=FBgn0003654.1.mrna1;geneID=FBgn0003654.1.path1;Name=FBgn0003654.1;Dir=sensecoverage=100.0;identity=99.7;matches=2015;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012017
Chr1	stalkie_big_nohaplotig	exon	143732637	143732851	100	+	.	Parent=FBgn0003654.1.mrna1;Target=FBgn0003654.1 1 215 +
Chr1	stalkie_big_nohaplotig	exon	143732917	143733063	99	+	.	Parent=FBgn0003654.1.mrna1;Target=FBgn0003654.1 216 362 +
Chr1	stalkie_big_nohaplotig	exon	143733121	143733248	99	+	.	Parent=FBgn0003654.1.mrna1;Target=FBgn0003654.1 363 490 +
Chr1	stalkie_big_nohaplotig	exon	143735805	143735837	100	+	.	Parent=FBgn0003654.1.mrna1;Target=FBgn0003654.1 491 523 +
Chr1	stalkie_big_nohaplotig	exon	143736742	143736762	100	+	.	Parent=FBgn0003654.1.mrna1;Target=FBgn0003654.1 524 544 +
Chr1	stalkie_big_nohaplotig	exon	143737639	143737686	100	+	.	Parent=FBgn0003654.1.mrna1;Target=FBgn0003654.1 545 592 +
Chr1	stalkie_big_nohaplotig	exon	143746553	143746708	98	+	.	Parent=FBgn0003654.1.mrna1;Target=FBgn0003654.1 593 748 +
Chr1	stalkie_big_nohaplotig	exon	143746777	143747072	100	+	.	Parent=FBgn0003654.1.mrna1;Target=FBgn0003654.1 749 1044 +
Chr1	stalkie_big_nohaplotig	exon	143747142	143747607	100	+	.	Parent=FBgn0003654.1.mrna1;Target=FBgn0003654.1 1045 1510 +
Chr1	stalkie_big_nohaplotig	exon	143747685	143747845	100	+	.	Parent=FBgn0003654.1.mrna1;Target=FBgn0003654.1 1511 1671 +
Chr1	stalkie_big_nohaplotig	exon	143748663	143749013	99	+	.	Parent=FBgn0003654.1.mrna1;Target=FBgn0003654.1 1672 2022 +
Chr1	stalkie_big_nohaplotig	CDS	143732637	143732851	.	+	0	Parent=FBgn0003654.1.mrna1;Target=FBgn0003654.1 1 215 +
Chr1	stalkie_big_nohaplotig	CDS	143732917	143733063	.	+	1	Parent=FBgn0003654.1.mrna1;Target=FBgn0003654.1 216 362 +
Chr1	stalkie_big_nohaplotig	CDS	143733121	143733248	.	+	1	Parent=FBgn0003654.1.mrna1;Target=FBgn0003654.1 363 490 +
Chr1	stalkie_big_nohaplotig	CDS	143735805	143735837	.	+	2	Parent=FBgn0003654.1.mrna1;Target=FBgn0003654.1 491 523 +
Chr1	stalkie_big_nohaplotig	CDS	143736742	143736762	.	+	2	Parent=FBgn0003654.1.mrna1;Target=FBgn0003654.1 524 544 +
Chr1	stalkie_big_nohaplotig	CDS	143737639	143737686	.	+	2	Parent=FBgn0003654.1.mrna1;Target=FBgn0003654.1 545 592 +
Chr1	stalkie_big_nohaplotig	CDS	143746553	143746708	.	+	2	Parent=FBgn0003654.1.mrna1;Target=FBgn0003654.1 593 748 +
Chr1	stalkie_big_nohaplotig	CDS	143746777	143747072	.	+	2	Parent=FBgn0003654.1.mrna1;Target=FBgn0003654.1 749 1044 +
Chr1	stalkie_big_nohaplotig	CDS	143747142	143747607	.	+	0	Parent=FBgn0003654.1.mrna1;Target=FBgn0003654.1 1045 1510 +
Chr1	stalkie_big_nohaplotig	CDS	143747685	143747845	.	+	2	Parent=FBgn0003654.1.mrna1;Target=FBgn0003654.1 1511 1671 +
Chr1	stalkie_big_nohaplotig	CDS	143748663	143749013	.	+	0	Parent=FBgn0003654.1.mrna1;Target=FBgn0003654.1 1672 2022 +
Chr1	gffcl	locus	143738060	143739573	.	+	.	ID=RLOC_00012018;geneIDs=comp155025_c0_seq1.path1;transcripts=comp155025_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143738060	143739573	.	+	.	ID=comp155025_c0_seq1.mrna1;geneID=comp155025_c0_seq1.path1;Name=comp155025_c0_seq1;Dir=indeterminatecoverage=99.4;identity=92.1;matches=1298;mismatches=92;indels=19;unknowns=0;Target=comp155025_c0_seq1 1048 872 .;locus=RLOC_00012018
Chr1	stalkie_big_nohaplotig	exon	143738060	143738369	75	+	.	Parent=comp155025_c0_seq1.mrna1;Target=comp155025_c0_seq1 311 9 .
Chr1	stalkie_big_nohaplotig	exon	143738484	143739573	96	+	.	Parent=comp155025_c0_seq1.mrna1;Target=comp155025_c0_seq1 1407 312 .
Chr1	stalkie_big_nohaplotig	CDS	143739040	143739216	.	+	0	Parent=comp155025_c0_seq1.mrna1
Chr1	gffcl	locus	143740356	143740841	.	+	.	ID=RLOC_00012019;geneIDs=comp157569_c1_seq1.path1;transcripts=comp157569_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143740356	143740841	.	+	.	ID=comp157569_c1_seq1.mrna1;geneID=comp157569_c1_seq1.path1;Name=comp157569_c1_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=321;mismatches=10;indels=1;unknowns=0;locus=RLOC_00012019
Chr1	stalkie_big_nohaplotig	exon	143740356	143740494	97	+	.	Parent=comp157569_c1_seq1.mrna1;Target=comp157569_c1_seq1 139 1 .
Chr1	stalkie_big_nohaplotig	exon	143740649	143740841	96	+	.	Parent=comp157569_c1_seq1.mrna1;Target=comp157569_c1_seq1 340 149 .
Chr1	stalkie_big_nohaplotig	CDS	143740459	143740494	.	+	0	Parent=comp157569_c1_seq1.mrna1;Target=comp157569_c1_seq1 139 104 .
Chr1	stalkie_big_nohaplotig	CDS	143740649	143740678	.	+	0	Parent=comp157569_c1_seq1.mrna1;Target=comp157569_c1_seq1 178 149 .
Chr1	gffcl	locus	143741444	143743023	.	.	.	ID=RLOC_00012020;geneIDs=comp57211_c0_seq1.path1,comp161881_c0_seq1.path1;transcripts=comp161881_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143741444	143742603	.	-	.	ID=comp161881_c0_seq1.mrna1;geneID=comp161881_c0_seq1.path1;Name=comp161881_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.0;matches=1065;mismatches=19;indels=74;unknowns=0;locus=RLOC_00012020
Chr1	stalkie_big_nohaplotig	exon	143741444	143742388	97	-	.	Parent=comp161881_c0_seq1.mrna1;Target=comp161881_c0_seq1 1158 210 .
Chr1	stalkie_big_nohaplotig	exon	143742465	143742603	65	-	.	Parent=comp161881_c0_seq1.mrna1;Target=comp161881_c0_seq1 209 1 .
Chr1	stalkie_big_nohaplotig	CDS	143742275	143742388	.	-	1	Parent=comp161881_c0_seq1.mrna1;Target=comp161881_c0_seq1 327 210 .
Chr1	stalkie_big_nohaplotig	CDS	143742465	143742517	.	-	0	Parent=comp161881_c0_seq1.mrna1;Target=comp161881_c0_seq1 209 157 .
Chr1	gffcl	locus	143743170	143743799	.	+	.	ID=RLOC_00012021;geneIDs=comp153812_c1_seq1.path1;transcripts=comp153812_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143743170	143743799	.	+	.	ID=comp153812_c1_seq1.mrna1;geneID=comp153812_c1_seq1.path1;Name=comp153812_c1_seq1;Dir=indeterminatecoverage=99.7;identity=98.7;matches=622;mismatches=8;indels=0;unknowns=0;Target=comp153812_c1_seq1 632 3 .;CDS_Target=comp153812_c1_seq1 453 217 .;locus=RLOC_00012021
Chr1	stalkie_big_nohaplotig	exon	143743170	143743799	98	+	.	Parent=comp153812_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	143743384	143743620	.	+	0	Parent=comp153812_c1_seq1.mrna1
Chr1	gffcl	locus	143743966	143746075	.	-	.	ID=RLOC_00012022;geneIDs=comp162351_c0_seq1.path1;transcripts=comp162351_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143743966	143746075	.	-	.	ID=comp162351_c0_seq1.mrna1;geneID=comp162351_c0_seq1.path1;Name=comp162351_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.1;matches=1851;mismatches=69;indels=135;unknowns=0;Target=comp162351_c0_seq1 728 720 .;locus=RLOC_00012022
Chr1	stalkie_big_nohaplotig	exon	143743966	143745189	89	-	.	Parent=comp162351_c0_seq1.mrna1;Target=comp162351_c0_seq1 2110 791 .
Chr1	stalkie_big_nohaplotig	exon	143745372	143746075	91	-	.	Parent=comp162351_c0_seq1.mrna1;Target=comp162351_c0_seq1 728 2 .
Chr1	stalkie_big_nohaplotig	CDS	143745372	143745380	.	-	0	Parent=comp162351_c0_seq1.mrna1
Chr1	gffcl	locus	143752544	143755598	.	+	.	ID=RLOC_00012023;geneIDs=FBgn0000084.1.path1,comp158882_c0_seq1.path1;transcripts=FBgn0000084.1.mrna1,comp158882_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143752544	143755598	.	+	.	ID=FBgn0000084.1.mrna1;geneID=FBgn0000084.1.path1;Name=FBgn0000084.1;Dir=sensecoverage=100.0;identity=98.6;matches=961;mismatches=14;indels=0;unknowns=0;locus=RLOC_00012023
Chr1	stalkie_big_nohaplotig	exon	143752544	143752570	100	+	.	Parent=FBgn0000084.1.mrna1;Target=FBgn0000084.1 1 27 +
Chr1	stalkie_big_nohaplotig	exon	143752700	143753408	98	+	.	Parent=FBgn0000084.1.mrna1;Target=FBgn0000084.1 28 736 +
Chr1	stalkie_big_nohaplotig	exon	143753484	143753665	98	+	.	Parent=FBgn0000084.1.mrna1;Target=FBgn0000084.1 737 918 +
Chr1	stalkie_big_nohaplotig	exon	143753783	143753785	100	+	.	Parent=FBgn0000084.1.mrna1;Target=FBgn0000084.1 919 921 +
Chr1	stalkie_big_nohaplotig	exon	143755545	143755598	100	+	.	Parent=FBgn0000084.1.mrna1;Target=FBgn0000084.1 922 975 +
Chr1	stalkie_big_nohaplotig	CDS	143752544	143752570	.	+	0	Parent=FBgn0000084.1.mrna1;Target=FBgn0000084.1 1 27 +
Chr1	stalkie_big_nohaplotig	CDS	143752700	143753408	.	+	0	Parent=FBgn0000084.1.mrna1;Target=FBgn0000084.1 28 736 +
Chr1	stalkie_big_nohaplotig	CDS	143753484	143753665	.	+	2	Parent=FBgn0000084.1.mrna1;Target=FBgn0000084.1 737 918 +
Chr1	stalkie_big_nohaplotig	CDS	143753783	143753785	.	+	0	Parent=FBgn0000084.1.mrna1;Target=FBgn0000084.1 919 921 +
Chr1	stalkie_big_nohaplotig	CDS	143755545	143755598	.	+	0	Parent=FBgn0000084.1.mrna1;Target=FBgn0000084.1 922 975 +
Chr1	stalkie_big_nohaplotig	mRNA	143753765	143755150	.	+	.	ID=comp158882_c0_seq1.mrna1;geneID=comp158882_c0_seq1.path1;Name=comp158882_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.2;matches=1326;mismatches=37;indels=16;unknowns=0;locus=RLOC_00012023
Chr1	stalkie_big_nohaplotig	exon	143753765	143754256	92	+	.	Parent=comp158882_c0_seq1.mrna1;Target=comp158882_c0_seq1 484 1 .
Chr1	stalkie_big_nohaplotig	exon	143754268	143755150	98	+	.	Parent=comp158882_c0_seq1.mrna1;Target=comp158882_c0_seq1 1367 485 .
Chr1	stalkie_big_nohaplotig	CDS	143754077	143754256	.	+	0	Parent=comp158882_c0_seq1.mrna1;Target=comp158882_c0_seq1 484 312 .
Chr1	stalkie_big_nohaplotig	CDS	143754268	143754334	.	+	0	Parent=comp158882_c0_seq1.mrna1;Target=comp158882_c0_seq1 551 485 .
Chr1	gffcl	locus	143756293	143757816	.	-	.	ID=RLOC_00012024;geneIDs=FBgn0031094.1.path1;transcripts=FBgn0031094.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143756293	143757816	.	-	.	ID=FBgn0031094.1.mrna1;geneID=FBgn0031094.1.path1;Name=FBgn0031094.1;Dir=sensecoverage=100.0;identity=99.9;matches=845;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012024
Chr1	stalkie_big_nohaplotig	exon	143756293	143756379	100	-	.	Parent=FBgn0031094.1.mrna1;Target=FBgn0031094.1 760 846 +
Chr1	stalkie_big_nohaplotig	exon	143756879	143757040	99	-	.	Parent=FBgn0031094.1.mrna1;Target=FBgn0031094.1 598 759 +
Chr1	stalkie_big_nohaplotig	exon	143757102	143757321	100	-	.	Parent=FBgn0031094.1.mrna1;Target=FBgn0031094.1 378 597 +
Chr1	stalkie_big_nohaplotig	exon	143757377	143757708	100	-	.	Parent=FBgn0031094.1.mrna1;Target=FBgn0031094.1 46 377 +
Chr1	stalkie_big_nohaplotig	exon	143757772	143757816	100	-	.	Parent=FBgn0031094.1.mrna1;Target=FBgn0031094.1 1 45 +
Chr1	stalkie_big_nohaplotig	CDS	143756293	143756379	.	-	0	Parent=FBgn0031094.1.mrna1;Target=FBgn0031094.1 760 846 +
Chr1	stalkie_big_nohaplotig	CDS	143756879	143757040	.	-	0	Parent=FBgn0031094.1.mrna1;Target=FBgn0031094.1 598 759 +
Chr1	stalkie_big_nohaplotig	CDS	143757102	143757321	.	-	1	Parent=FBgn0031094.1.mrna1;Target=FBgn0031094.1 378 597 +
Chr1	stalkie_big_nohaplotig	CDS	143757377	143757708	.	-	0	Parent=FBgn0031094.1.mrna1;Target=FBgn0031094.1 46 377 +
Chr1	stalkie_big_nohaplotig	CDS	143757772	143757816	.	-	0	Parent=FBgn0031094.1.mrna1;Target=FBgn0031094.1 1 45 +
Chr1	gffcl	locus	143759891	143762643	.	+	.	ID=RLOC_00012025;geneIDs=FBgn0031093.1.path1;transcripts=FBgn0031093.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143759891	143762643	.	+	.	ID=FBgn0031093.1.mrna1;geneID=FBgn0031093.1.path1;Name=FBgn0031093.1;Dir=sensecoverage=100.0;identity=99.6;matches=1613;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012025
Chr1	stalkie_big_nohaplotig	exon	143759891	143760020	99	+	.	Parent=FBgn0031093.1.mrna1;Target=FBgn0031093.1 1 130 +
Chr1	stalkie_big_nohaplotig	exon	143760077	143760339	100	+	.	Parent=FBgn0031093.1.mrna1;Target=FBgn0031093.1 131 393 +
Chr1	stalkie_big_nohaplotig	exon	143760401	143761208	99	+	.	Parent=FBgn0031093.1.mrna1;Target=FBgn0031093.1 394 1201 +
Chr1	stalkie_big_nohaplotig	exon	143762162	143762292	100	+	.	Parent=FBgn0031093.1.mrna1;Target=FBgn0031093.1 1202 1332 +
Chr1	stalkie_big_nohaplotig	exon	143762356	143762643	99	+	.	Parent=FBgn0031093.1.mrna1;Target=FBgn0031093.1 1333 1620 +
Chr1	stalkie_big_nohaplotig	CDS	143759891	143760020	.	+	0	Parent=FBgn0031093.1.mrna1;Target=FBgn0031093.1 1 130 +
Chr1	stalkie_big_nohaplotig	CDS	143760077	143760339	.	+	2	Parent=FBgn0031093.1.mrna1;Target=FBgn0031093.1 131 393 +
Chr1	stalkie_big_nohaplotig	CDS	143760401	143761208	.	+	0	Parent=FBgn0031093.1.mrna1;Target=FBgn0031093.1 394 1201 +
Chr1	stalkie_big_nohaplotig	CDS	143762162	143762292	.	+	2	Parent=FBgn0031093.1.mrna1;Target=FBgn0031093.1 1202 1332 +
Chr1	stalkie_big_nohaplotig	CDS	143762356	143762643	.	+	0	Parent=FBgn0031093.1.mrna1;Target=FBgn0031093.1 1333 1620 +
Chr1	gffcl	locus	143764066	143772197	.	-	.	ID=RLOC_00012026;geneIDs=FBgn0032517.1.path1;transcripts=FBgn0032517.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143764066	143772197	.	-	.	ID=FBgn0032517.1.mrna1;geneID=FBgn0032517.1.path1;Name=FBgn0032517.1;Dir=sensecoverage=100.0;identity=98.8;matches=5871;mismatches=66;indels=6;unknowns=0;locus=RLOC_00012026
Chr1	stalkie_big_nohaplotig	exon	143764066	143764178	100	-	.	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 5831 5943 +
Chr1	stalkie_big_nohaplotig	exon	143764290	143764561	99	-	.	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 5559 5830 +
Chr1	stalkie_big_nohaplotig	exon	143764626	143765020	96	-	.	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 5158 5558 +
Chr1	stalkie_big_nohaplotig	exon	143765331	143765484	97	-	.	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 5004 5157 +
Chr1	stalkie_big_nohaplotig	exon	143766427	143767160	98	-	.	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 4270 5003 +
Chr1	stalkie_big_nohaplotig	exon	143767222	143769978	98	-	.	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 1513 4269 +
Chr1	stalkie_big_nohaplotig	exon	143770109	143770199	98	-	.	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 1422 1512 +
Chr1	stalkie_big_nohaplotig	exon	143770300	143770519	99	-	.	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 1202 1421 +
Chr1	stalkie_big_nohaplotig	exon	143770668	143770824	99	-	.	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 1045 1201 +
Chr1	stalkie_big_nohaplotig	exon	143770888	143771170	99	-	.	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 762 1044 +
Chr1	stalkie_big_nohaplotig	exon	143771233	143771442	100	-	.	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 552 761 +
Chr1	stalkie_big_nohaplotig	exon	143771536	143771675	99	-	.	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 412 551 +
Chr1	stalkie_big_nohaplotig	exon	143771733	143771926	99	-	.	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 218 411 +
Chr1	stalkie_big_nohaplotig	exon	143771981	143772197	97	-	.	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 1 217 +
Chr1	stalkie_big_nohaplotig	CDS	143764066	143764178	.	-	2	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 5831 5943 +
Chr1	stalkie_big_nohaplotig	CDS	143764290	143764561	.	-	1	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 5559 5830 +
Chr1	stalkie_big_nohaplotig	CDS	143764626	143765020	.	-	0	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 5158 5558 +
Chr1	stalkie_big_nohaplotig	CDS	143765331	143765484	.	-	1	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 5004 5157 +
Chr1	stalkie_big_nohaplotig	CDS	143766427	143767160	.	-	0	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 4270 5003 +
Chr1	stalkie_big_nohaplotig	CDS	143767222	143769978	.	-	0	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 1513 4269 +
Chr1	stalkie_big_nohaplotig	CDS	143770109	143770199	.	-	1	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 1422 1512 +
Chr1	stalkie_big_nohaplotig	CDS	143770300	143770519	.	-	2	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 1202 1421 +
Chr1	stalkie_big_nohaplotig	CDS	143770668	143770824	.	-	0	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 1045 1201 +
Chr1	stalkie_big_nohaplotig	CDS	143770888	143771170	.	-	1	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 762 1044 +
Chr1	stalkie_big_nohaplotig	CDS	143771233	143771442	.	-	1	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 552 761 +
Chr1	stalkie_big_nohaplotig	CDS	143771536	143771675	.	-	0	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 412 551 +
Chr1	stalkie_big_nohaplotig	CDS	143771733	143771926	.	-	2	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 218 411 +
Chr1	stalkie_big_nohaplotig	CDS	143771981	143772197	.	-	0	Parent=FBgn0032517.1.mrna1;Target=FBgn0032517.1 1 217 +
Chr1	gffcl	locus	143773059	143774103	.	+	.	ID=RLOC_00012027;geneIDs=FBgn0051866.1.path1;transcripts=FBgn0051866.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143773059	143774103	.	+	.	ID=FBgn0051866.1.mrna1;geneID=FBgn0051866.1.path1;Name=FBgn0051866.1;Dir=sensecoverage=100.0;identity=99.2;matches=973;mismatches=8;indels=0;unknowns=0;locus=RLOC_00012027
Chr1	stalkie_big_nohaplotig	exon	143773059	143773915	99	+	.	Parent=FBgn0051866.1.mrna1;Target=FBgn0051866.1 1 857 +
Chr1	stalkie_big_nohaplotig	exon	143773980	143774103	97	+	.	Parent=FBgn0051866.1.mrna1;Target=FBgn0051866.1 858 981 +
Chr1	stalkie_big_nohaplotig	CDS	143773059	143773915	.	+	0	Parent=FBgn0051866.1.mrna1;Target=FBgn0051866.1 1 857 +
Chr1	stalkie_big_nohaplotig	CDS	143773980	143774103	.	+	1	Parent=FBgn0051866.1.mrna1;Target=FBgn0051866.1 858 981 +
Chr1	gffcl	locus	143803932	143804653	.	+	.	ID=RLOC_00012028;geneIDs=comp135298_c0_seq1.path1;transcripts=comp135298_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143803932	143804653	.	+	.	ID=comp135298_c0_seq1.mrna1;geneID=comp135298_c0_seq1.path1;Name=comp135298_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.8;matches=681;mismatches=38;indels=7;unknowns=0;Target=comp135298_c0_seq1 723 1 .;CDS_Target=comp135298_c0_seq1 380 318 .;locus=RLOC_00012028
Chr1	stalkie_big_nohaplotig	exon	143803932	143804653	93	+	.	Parent=comp135298_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	143804249	143804312	.	+	0	Parent=comp135298_c0_seq1.mrna1
Chr1	gffcl	locus	143883574	143884334	.	+	.	ID=RLOC_00012030;geneIDs=comp152065_c0_seq1.path1;transcripts=comp152065_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143883574	143884334	.	+	.	ID=comp152065_c0_seq1.mrna1;geneID=comp152065_c0_seq1.path1;Name=comp152065_c0_seq1;Dir=sensecoverage=96.2;identity=97.0;matches=586;mismatches=18;indels=0;unknowns=0;locus=RLOC_00012030
Chr1	stalkie_big_nohaplotig	exon	143883574	143883651	97	+	.	Parent=comp152065_c0_seq1.mrna1;Target=comp152065_c0_seq1 1 78 +
Chr1	stalkie_big_nohaplotig	exon	143883726	143883870	99	+	.	Parent=comp152065_c0_seq1.mrna1;Target=comp152065_c0_seq1 79 223 +
Chr1	stalkie_big_nohaplotig	exon	143883954	143884334	96	+	.	Parent=comp152065_c0_seq1.mrna1;Target=comp152065_c0_seq1 224 604 +
Chr1	stalkie_big_nohaplotig	CDS	143883756	143883870	.	+	0	Parent=comp152065_c0_seq1.mrna1;Target=comp152065_c0_seq1 109 223 +
Chr1	stalkie_big_nohaplotig	CDS	143883954	143884084	.	+	2	Parent=comp152065_c0_seq1.mrna1;Target=comp152065_c0_seq1 224 354 +
Chr1	gffcl	locus	143920775	143922488	.	-	.	ID=RLOC_00012031;geneIDs=FBgn0010356.3.path2;transcripts=FBgn0010356.3.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	143920775	143922488	.	-	.	ID=FBgn0010356.3.mrna2;geneID=FBgn0010356.3.path2;Name=FBgn0010356.3;Dir=sensecoverage=100.0;identity=99.2;matches=1423;mismatches=11;indels=0;unknowns=0;locus=RLOC_00012031
Chr1	stalkie_big_nohaplotig	exon	143920775	143922055	99	-	.	Parent=FBgn0010356.3.mrna2;Target=FBgn0010356.3 154 1434 +
Chr1	stalkie_big_nohaplotig	exon	143922336	143922488	96	-	.	Parent=FBgn0010356.3.mrna2;Target=FBgn0010356.3 1 153 +
Chr1	stalkie_big_nohaplotig	CDS	143920775	143922055	.	-	0	Parent=FBgn0010356.3.mrna2;Target=FBgn0010356.3 154 1434 +
Chr1	stalkie_big_nohaplotig	CDS	143922336	143922488	.	-	0	Parent=FBgn0010356.3.mrna2;Target=FBgn0010356.3 1 153 +
Chr1	gffcl	locus	143949685	143950568	.	+	.	ID=RLOC_00012032;geneIDs=FBgn0003742.2.path1;transcripts=FBgn0003742.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143949685	143950568	.	+	.	ID=FBgn0003742.2.mrna1;geneID=FBgn0003742.2.path1;Name=FBgn0003742.2;Dir=sensecoverage=100.0;identity=96.9;matches=677;mismatches=16;indels=6;unknowns=0;locus=RLOC_00012032
Chr1	stalkie_big_nohaplotig	exon	143949685	143949987	95	+	.	Parent=FBgn0003742.2.mrna1;Target=FBgn0003742.2 1 309 +
Chr1	stalkie_big_nohaplotig	exon	143950055	143950183	97	+	.	Parent=FBgn0003742.2.mrna1;Target=FBgn0003742.2 310 438 +
Chr1	stalkie_big_nohaplotig	exon	143950243	143950418	99	+	.	Parent=FBgn0003742.2.mrna1;Target=FBgn0003742.2 439 614 +
Chr1	stalkie_big_nohaplotig	exon	143950484	143950568	96	+	.	Parent=FBgn0003742.2.mrna1;Target=FBgn0003742.2 615 699 +
Chr1	stalkie_big_nohaplotig	CDS	143949685	143949987	.	+	0	Parent=FBgn0003742.2.mrna1;Target=FBgn0003742.2 1 309 +
Chr1	stalkie_big_nohaplotig	CDS	143950055	143950183	.	+	0	Parent=FBgn0003742.2.mrna1;Target=FBgn0003742.2 310 438 +
Chr1	stalkie_big_nohaplotig	CDS	143950243	143950418	.	+	0	Parent=FBgn0003742.2.mrna1;Target=FBgn0003742.2 439 614 +
Chr1	stalkie_big_nohaplotig	CDS	143950484	143950568	.	+	1	Parent=FBgn0003742.2.mrna1;Target=FBgn0003742.2 615 699 +
Chr1	gffcl	locus	143957987	143959326	.	-	.	ID=RLOC_00012034;geneIDs=FBgn0031092.1.path1;transcripts=FBgn0031092.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143957987	143959326	.	-	.	ID=FBgn0031092.1.mrna1;geneID=FBgn0031092.1.path1;Name=FBgn0031092.1;Dir=sensecoverage=100.0;identity=98.6;matches=920;mismatches=13;indels=0;unknowns=0;locus=RLOC_00012034
Chr1	stalkie_big_nohaplotig	exon	143957987	143958082	98	-	.	Parent=FBgn0031092.1.mrna1;Target=FBgn0031092.1 838 933 +
Chr1	stalkie_big_nohaplotig	exon	143958144	143958575	97	-	.	Parent=FBgn0031092.1.mrna1;Target=FBgn0031092.1 406 837 +
Chr1	stalkie_big_nohaplotig	exon	143958632	143958735	100	-	.	Parent=FBgn0031092.1.mrna1;Target=FBgn0031092.1 302 405 +
Chr1	stalkie_big_nohaplotig	exon	143958795	143958883	98	-	.	Parent=FBgn0031092.1.mrna1;Target=FBgn0031092.1 213 301 +
Chr1	stalkie_big_nohaplotig	exon	143958954	143959134	98	-	.	Parent=FBgn0031092.1.mrna1;Target=FBgn0031092.1 32 212 +
Chr1	stalkie_big_nohaplotig	exon	143959296	143959326	100	-	.	Parent=FBgn0031092.1.mrna1;Target=FBgn0031092.1 1 31 +
Chr1	stalkie_big_nohaplotig	CDS	143957987	143958082	.	-	0	Parent=FBgn0031092.1.mrna1;Target=FBgn0031092.1 838 933 +
Chr1	stalkie_big_nohaplotig	CDS	143958144	143958575	.	-	0	Parent=FBgn0031092.1.mrna1;Target=FBgn0031092.1 406 837 +
Chr1	stalkie_big_nohaplotig	CDS	143958632	143958735	.	-	2	Parent=FBgn0031092.1.mrna1;Target=FBgn0031092.1 302 405 +
Chr1	stalkie_big_nohaplotig	CDS	143958795	143958883	.	-	1	Parent=FBgn0031092.1.mrna1;Target=FBgn0031092.1 213 301 +
Chr1	stalkie_big_nohaplotig	CDS	143958954	143959134	.	-	2	Parent=FBgn0031092.1.mrna1;Target=FBgn0031092.1 32 212 +
Chr1	stalkie_big_nohaplotig	CDS	143959296	143959326	.	-	0	Parent=FBgn0031092.1.mrna1;Target=FBgn0031092.1 1 31 +
Chr1	gffcl	locus	143962326	143964067	.	+	.	ID=RLOC_00012035;geneIDs=FBgn0000499.1.path1;transcripts=FBgn0000499.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143962326	143964067	.	+	.	ID=FBgn0000499.1.mrna1;geneID=FBgn0000499.1.path1;Name=FBgn0000499.1;Dir=indeterminatecoverage=99.9;identity=99.7;matches=1739;mismatches=2;indels=3;unknowns=1;Target=FBgn0000499.1 1746 2 .;CDS_Target=FBgn0000499.1 1746 4 .;locus=RLOC_00012035
Chr1	stalkie_big_nohaplotig	exon	143962326	143964067	99	+	.	Parent=FBgn0000499.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	143962328	143964067	.	+	0	Parent=FBgn0000499.1.mrna1
Chr1	gffcl	locus	143966714	143967168	.	-	.	ID=RLOC_00012036;geneIDs=comp156240_c0_seq1.path1;transcripts=comp156240_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143966714	143967168	.	-	.	ID=comp156240_c0_seq1.mrna1;geneID=comp156240_c0_seq1.path1;Name=comp156240_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=449;mismatches=3;indels=3;unknowns=0;Target=comp156240_c0_seq1 452 1 .;CDS_Target=comp156240_c0_seq1 264 181 .;locus=RLOC_00012036
Chr1	stalkie_big_nohaplotig	exon	143966714	143967168	98	-	.	Parent=comp156240_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	143966905	143966988	.	-	0	Parent=comp156240_c0_seq1.mrna1
Chr1	gffcl	locus	143977024	143979224	.	+	.	ID=RLOC_00012038;geneIDs=AGAP012337.1.path1;transcripts=AGAP012337.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143977024	143979224	.	+	.	ID=AGAP012337.1.mrna1;geneID=AGAP012337.1.path1;Name=AGAP012337.1;Dir=sensecoverage=100.0;identity=99.2;matches=1407;mismatches=11;indels=1;unknowns=0;Target=AGAP012337.1 3 98 +;locus=RLOC_00012038
Chr1	stalkie_big_nohaplotig	exon	143977024	143977495	99	+	.	Parent=AGAP012337.1.mrna1;Target=AGAP012337.1 1 473 +
Chr1	stalkie_big_nohaplotig	exon	143978060	143978489	99	+	.	Parent=AGAP012337.1.mrna1;Target=AGAP012337.1 474 903 +
Chr1	stalkie_big_nohaplotig	exon	143978552	143978730	98	+	.	Parent=AGAP012337.1.mrna1;Target=AGAP012337.1 904 1082 +
Chr1	stalkie_big_nohaplotig	exon	143978794	143978948	99	+	.	Parent=AGAP012337.1.mrna1;Target=AGAP012337.1 1083 1237 +
Chr1	stalkie_big_nohaplotig	exon	143979043	143979224	100	+	.	Parent=AGAP012337.1.mrna1;Target=AGAP012337.1 1238 1419 +
Chr1	stalkie_big_nohaplotig	CDS	143977026	143977120	.	+	0	Parent=AGAP012337.1.mrna1
Chr1	gffcl	locus	143984189	143985569	.	-	.	ID=RLOC_00012039;geneIDs=FBgn0037940.1.path1;transcripts=FBgn0037940.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	143984189	143985569	.	-	.	ID=FBgn0037940.1.mrna1;geneID=FBgn0037940.1.path1;Name=FBgn0037940.1;Dir=sensecoverage=100.0;identity=99.9;matches=743;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012039
Chr1	stalkie_big_nohaplotig	exon	143984189	143984336	100	-	.	Parent=FBgn0037940.1.mrna1;Target=FBgn0037940.1 597 744 +
Chr1	stalkie_big_nohaplotig	exon	143984415	143984525	99	-	.	Parent=FBgn0037940.1.mrna1;Target=FBgn0037940.1 486 596 +
Chr1	stalkie_big_nohaplotig	exon	143984751	143985082	100	-	.	Parent=FBgn0037940.1.mrna1;Target=FBgn0037940.1 154 485 +
Chr1	stalkie_big_nohaplotig	exon	143985417	143985569	100	-	.	Parent=FBgn0037940.1.mrna1;Target=FBgn0037940.1 1 153 +
Chr1	stalkie_big_nohaplotig	CDS	143984189	143984336	.	-	1	Parent=FBgn0037940.1.mrna1;Target=FBgn0037940.1 597 744 +
Chr1	stalkie_big_nohaplotig	CDS	143984415	143984525	.	-	1	Parent=FBgn0037940.1.mrna1;Target=FBgn0037940.1 486 596 +
Chr1	stalkie_big_nohaplotig	CDS	143984751	143985082	.	-	0	Parent=FBgn0037940.1.mrna1;Target=FBgn0037940.1 154 485 +
Chr1	stalkie_big_nohaplotig	CDS	143985417	143985569	.	-	0	Parent=FBgn0037940.1.mrna1;Target=FBgn0037940.1 1 153 +
Chr1	gffcl	locus	144092205	144203924	.	-	.	ID=RLOC_00012041;geneIDs=comp145063_c0_seq1.path1;transcripts=comp145063_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144092205	144203924	.	-	.	ID=comp145063_c0_seq1.mrna1;geneID=comp145063_c0_seq1.path1;Name=comp145063_c0_seq1;Dir=sensecoverage=99.7;identity=95.4;matches=372;mismatches=18;indels=0;unknowns=0;Target=comp145063_c0_seq1 264 281 +;locus=RLOC_00012041
Chr1	stalkie_big_nohaplotig	exon	144092205	144092480	94	-	.	Parent=comp145063_c0_seq1.mrna1;Target=comp145063_c0_seq1 115 390 +
Chr1	stalkie_big_nohaplotig	exon	144203811	144203924	96	-	.	Parent=comp145063_c0_seq1.mrna1;Target=comp145063_c0_seq1 1 114 +
Chr1	stalkie_big_nohaplotig	CDS	144092314	144092331	.	-	0	Parent=comp145063_c0_seq1.mrna1
Chr1	gffcl	locus	144144698	144149210	.	+	.	ID=RLOC_00012042;geneIDs=FBgn0031100.1.path1;transcripts=FBgn0031100.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144144698	144149210	.	+	.	ID=FBgn0031100.1.mrna1;geneID=FBgn0031100.1.path1;Name=FBgn0031100.1;Dir=sensecoverage=95.8;identity=99.2;matches=1326;mismatches=11;indels=0;unknowns=0;locus=RLOC_00012042
Chr1	stalkie_big_nohaplotig	exon	144144698	144144876	100	+	.	Parent=FBgn0031100.1.mrna1;Target=FBgn0031100.1 59 237 +
Chr1	stalkie_big_nohaplotig	exon	144148053	144149210	99	+	.	Parent=FBgn0031100.1.mrna1;Target=FBgn0031100.1 238 1395 +
Chr1	stalkie_big_nohaplotig	CDS	144144700	144144876	.	+	0	Parent=FBgn0031100.1.mrna1;Target=FBgn0031100.1 61 237 +
Chr1	stalkie_big_nohaplotig	CDS	144148053	144149210	.	+	0	Parent=FBgn0031100.1.mrna1;Target=FBgn0031100.1 238 1395 +
Chr1	gffcl	locus	144182654	144183444	.	+	.	ID=RLOC_00012043;geneIDs=comp117518_c0_seq1.path1;transcripts=comp117518_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144182654	144183444	.	+	.	ID=comp117518_c0_seq1.mrna1;geneID=comp117518_c0_seq1.path1;Name=comp117518_c0_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=643;mismatches=3;indels=1;unknowns=0;locus=RLOC_00012043
Chr1	stalkie_big_nohaplotig	exon	144182654	144182717	100	+	.	Parent=comp117518_c0_seq1.mrna1;Target=comp117518_c0_seq1 1 64 +
Chr1	stalkie_big_nohaplotig	exon	144182810	144183246	100	+	.	Parent=comp117518_c0_seq1.mrna1;Target=comp117518_c0_seq1 65 501 +
Chr1	stalkie_big_nohaplotig	exon	144183299	144183444	97	+	.	Parent=comp117518_c0_seq1.mrna1;Target=comp117518_c0_seq1 502 646 +
Chr1	stalkie_big_nohaplotig	CDS	144182654	144182717	.	+	0	Parent=comp117518_c0_seq1.mrna1;Target=comp117518_c0_seq1 1 64 +
Chr1	stalkie_big_nohaplotig	CDS	144182810	144183246	.	+	2	Parent=comp117518_c0_seq1.mrna1;Target=comp117518_c0_seq1 65 501 +
Chr1	stalkie_big_nohaplotig	CDS	144183299	144183322	.	+	0	Parent=comp117518_c0_seq1.mrna1;Target=comp117518_c0_seq1 502 525 +
Chr1	gffcl	locus	144224292	144224745	.	-	.	ID=RLOC_00012044;geneIDs=comp139744_c4_seq1.path1;transcripts=comp139744_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144224292	144224745	.	-	.	ID=comp139744_c4_seq1.mrna1;geneID=comp139744_c4_seq1.path1;Name=comp139744_c4_seq1;Dir=indeterminatecoverage=100.0;identity=96.3;matches=447;mismatches=4;indels=13;unknowns=0;Target=comp139744_c4_seq1 461 1 .;CDS_Target=comp139744_c4_seq1 146 3 .;locus=RLOC_00012044
Chr1	stalkie_big_nohaplotig	exon	144224292	144224745	96	-	.	Parent=comp139744_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144224597	144224743	.	-	0	Parent=comp139744_c4_seq1.mrna1
Chr1	gffcl	locus	144249194	144250068	.	+	.	ID=RLOC_00012045;geneIDs=comp155473_c0_seq1.path1;transcripts=comp155473_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144249194	144250068	.	+	.	ID=comp155473_c0_seq1.mrna1;geneID=comp155473_c0_seq1.path1;Name=comp155473_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.7;matches=864;mismatches=11;indels=0;unknowns=0;Target=comp155473_c0_seq1 875 1 .;CDS_Target=comp155473_c0_seq1 768 670 .;locus=RLOC_00012045
Chr1	stalkie_big_nohaplotig	exon	144249194	144250068	98	+	.	Parent=comp155473_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144249863	144249961	.	+	0	Parent=comp155473_c0_seq1.mrna1
Chr1	gffcl	locus	144255647	144260239	.	+	.	ID=RLOC_00012046;geneIDs=FBgn0031099.1.path1;transcripts=FBgn0031099.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144255647	144260239	.	+	.	ID=FBgn0031099.1.mrna1;geneID=FBgn0031099.1.path1;Name=FBgn0031099.1;Dir=sensecoverage=100.0;identity=99.0;matches=1197;mismatches=12;indels=0;unknowns=0;locus=RLOC_00012046
Chr1	stalkie_big_nohaplotig	exon	144255647	144255869	99	+	.	Parent=FBgn0031099.1.mrna1;Target=FBgn0031099.1 1 223 +
Chr1	stalkie_big_nohaplotig	exon	144257906	144258171	98	+	.	Parent=FBgn0031099.1.mrna1;Target=FBgn0031099.1 224 489 +
Chr1	stalkie_big_nohaplotig	exon	144258247	144258465	98	+	.	Parent=FBgn0031099.1.mrna1;Target=FBgn0031099.1 490 708 +
Chr1	stalkie_big_nohaplotig	exon	144258553	144258874	98	+	.	Parent=FBgn0031099.1.mrna1;Target=FBgn0031099.1 709 1030 +
Chr1	stalkie_big_nohaplotig	exon	144260061	144260239	100	+	.	Parent=FBgn0031099.1.mrna1;Target=FBgn0031099.1 1031 1209 +
Chr1	stalkie_big_nohaplotig	CDS	144255647	144255869	.	+	0	Parent=FBgn0031099.1.mrna1;Target=FBgn0031099.1 1 223 +
Chr1	stalkie_big_nohaplotig	CDS	144257906	144258171	.	+	2	Parent=FBgn0031099.1.mrna1;Target=FBgn0031099.1 224 489 +
Chr1	stalkie_big_nohaplotig	CDS	144258247	144258465	.	+	0	Parent=FBgn0031099.1.mrna1;Target=FBgn0031099.1 490 708 +
Chr1	stalkie_big_nohaplotig	CDS	144258553	144258874	.	+	0	Parent=FBgn0031099.1.mrna1;Target=FBgn0031099.1 709 1030 +
Chr1	stalkie_big_nohaplotig	CDS	144260061	144260239	.	+	2	Parent=FBgn0031099.1.mrna1;Target=FBgn0031099.1 1031 1209 +
Chr1	gffcl	locus	144260524	144267192	.	-	.	ID=RLOC_00012047;geneIDs=FBgn0026206.2.path1;transcripts=FBgn0026206.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144260524	144267192	.	-	.	ID=FBgn0026206.2.mrna1;geneID=FBgn0026206.2.path1;Name=FBgn0026206.2;Dir=sensecoverage=100.0;identity=99.3;matches=2466;mismatches=18;indels=0;unknowns=0;locus=RLOC_00012047
Chr1	stalkie_big_nohaplotig	exon	144260524	144260619	100	-	.	Parent=FBgn0026206.2.mrna1;Target=FBgn0026206.2 2389 2484 +
Chr1	stalkie_big_nohaplotig	exon	144261885	144262117	98	-	.	Parent=FBgn0026206.2.mrna1;Target=FBgn0026206.2 2156 2388 +
Chr1	stalkie_big_nohaplotig	exon	144262179	144262342	98	-	.	Parent=FBgn0026206.2.mrna1;Target=FBgn0026206.2 1992 2155 +
Chr1	stalkie_big_nohaplotig	exon	144263274	144263664	99	-	.	Parent=FBgn0026206.2.mrna1;Target=FBgn0026206.2 1601 1991 +
Chr1	stalkie_big_nohaplotig	exon	144263719	144264466	98	-	.	Parent=FBgn0026206.2.mrna1;Target=FBgn0026206.2 853 1600 +
Chr1	stalkie_big_nohaplotig	exon	144264535	144264960	99	-	.	Parent=FBgn0026206.2.mrna1;Target=FBgn0026206.2 427 852 +
Chr1	stalkie_big_nohaplotig	exon	144265023	144265185	100	-	.	Parent=FBgn0026206.2.mrna1;Target=FBgn0026206.2 264 426 +
Chr1	stalkie_big_nohaplotig	exon	144266930	144267192	100	-	.	Parent=FBgn0026206.2.mrna1;Target=FBgn0026206.2 1 263 +
Chr1	stalkie_big_nohaplotig	CDS	144260524	144260619	.	-	0	Parent=FBgn0026206.2.mrna1;Target=FBgn0026206.2 2389 2484 +
Chr1	stalkie_big_nohaplotig	CDS	144261885	144262117	.	-	2	Parent=FBgn0026206.2.mrna1;Target=FBgn0026206.2 2156 2388 +
Chr1	stalkie_big_nohaplotig	CDS	144262179	144262342	.	-	1	Parent=FBgn0026206.2.mrna1;Target=FBgn0026206.2 1992 2155 +
Chr1	stalkie_big_nohaplotig	CDS	144263274	144263664	.	-	2	Parent=FBgn0026206.2.mrna1;Target=FBgn0026206.2 1601 1991 +
Chr1	stalkie_big_nohaplotig	CDS	144263719	144264466	.	-	0	Parent=FBgn0026206.2.mrna1;Target=FBgn0026206.2 853 1600 +
Chr1	stalkie_big_nohaplotig	CDS	144264535	144264960	.	-	0	Parent=FBgn0026206.2.mrna1;Target=FBgn0026206.2 427 852 +
Chr1	stalkie_big_nohaplotig	CDS	144265023	144265185	.	-	1	Parent=FBgn0026206.2.mrna1;Target=FBgn0026206.2 264 426 +
Chr1	stalkie_big_nohaplotig	CDS	144266930	144267192	.	-	0	Parent=FBgn0026206.2.mrna1;Target=FBgn0026206.2 1 263 +
Chr1	gffcl	locus	144273243	144274241	.	-	.	ID=RLOC_00012049;geneIDs=FBgn0030178.1.path1;transcripts=FBgn0030178.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144273243	144274241	.	-	.	ID=FBgn0030178.1.mrna1;geneID=FBgn0030178.1.path1;Name=FBgn0030178.1;Dir=sensecoverage=100.0;identity=98.2;matches=863;mismatches=13;indels=3;unknowns=0;locus=RLOC_00012049
Chr1	stalkie_big_nohaplotig	exon	144273243	144273462	97	-	.	Parent=FBgn0030178.1.mrna1;Target=FBgn0030178.1 657 876 +
Chr1	stalkie_big_nohaplotig	exon	144273525	144274028	99	-	.	Parent=FBgn0030178.1.mrna1;Target=FBgn0030178.1 153 656 +
Chr1	stalkie_big_nohaplotig	exon	144274087	144274241	96	-	.	Parent=FBgn0030178.1.mrna1;Target=FBgn0030178.1 1 152 +
Chr1	stalkie_big_nohaplotig	CDS	144273243	144273462	.	-	1	Parent=FBgn0030178.1.mrna1;Target=FBgn0030178.1 657 876 +
Chr1	stalkie_big_nohaplotig	CDS	144273525	144274028	.	-	1	Parent=FBgn0030178.1.mrna1;Target=FBgn0030178.1 153 656 +
Chr1	stalkie_big_nohaplotig	CDS	144274087	144274241	.	-	0	Parent=FBgn0030178.1.mrna1;Target=FBgn0030178.1 1 152 +
Chr1	gffcl	locus	144275442	144276419	.	.	.	ID=RLOC_00012050;geneIDs=comp146359_c0_seq1.path2,comp158424_c0_seq1.path1;transcripts=comp158424_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144275442	144276419	.	-	.	ID=comp158424_c0_seq1.mrna1;geneID=comp158424_c0_seq1.path1;Name=comp158424_c0_seq1;Dir=indeterminatecoverage=97.7;identity=98.1;matches=959;mismatches=18;indels=1;unknowns=0;Target=comp158424_c0_seq1 984 8 .;CDS_Target=comp158424_c0_seq1 549 10 .;locus=RLOC_00012050
Chr1	stalkie_big_nohaplotig	exon	144275442	144276419	98	-	.	Parent=comp158424_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144275878	144276417	.	-	0	Parent=comp158424_c0_seq1.mrna1
Chr1	gffcl	locus	144306260	144307654	.	-	.	ID=RLOC_00012052;geneIDs=comp143871_c0_seq1.path1;transcripts=comp143871_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144306260	144307654	.	-	.	ID=comp143871_c0_seq1.mrna1;geneID=comp143871_c0_seq1.path1;Name=comp143871_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1382;mismatches=13;indels=0;unknowns=0;Target=comp143871_c0_seq1 1395 1 .;CDS_Target=comp143871_c0_seq1 215 3 .;locus=RLOC_00012052
Chr1	stalkie_big_nohaplotig	exon	144306260	144307654	99	-	.	Parent=comp143871_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144307440	144307652	.	-	0	Parent=comp143871_c0_seq1.mrna1
Chr1	gffcl	locus	144362192	144362770	.	+	.	ID=RLOC_00012053;geneIDs=FBgn0029996.3.path1;transcripts=FBgn0029996.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144362192	144362770	.	+	.	ID=FBgn0029996.3.mrna1;geneID=FBgn0029996.3.path1;Name=FBgn0029996.3;Dir=indeterminatecoverage=100.0;identity=99.7;matches=577;mismatches=2;indels=0;unknowns=0;Target=FBgn0029996.3 579 1 .;locus=RLOC_00012053
Chr1	stalkie_big_nohaplotig	exon	144362192	144362770	99	+	.	Parent=FBgn0029996.3.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144362192	144362770	.	+	0	Parent=FBgn0029996.3.mrna1
Chr1	gffcl	locus	144373644	144373751	.	+	.	ID=RLOC_00012054;geneIDs=FBgn0029995.path2;transcripts=FBgn0029995.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	144373644	144373751	.	+	.	ID=FBgn0029995.mrna2;geneID=FBgn0029995.path2;Name=FBgn0029995;Dir=indeterminatecoverage=18.9;identity=98.1;matches=106;mismatches=2;indels=0;unknowns=0;Target=FBgn0029995 570 463 .;locus=RLOC_00012054
Chr1	stalkie_big_nohaplotig	exon	144373644	144373751	98	+	.	Parent=FBgn0029995.mrna2
Chr1	stalkie_big_nohaplotig	CDS	144373644	144373751	.	+	0	Parent=FBgn0029995.mrna2
Chr1	gffcl	locus	144389694	144392659	.	+	.	ID=RLOC_00012055;geneIDs=FBgn0029995.path1,FBgn0029995.1.path1;transcripts=FBgn0029995.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144389694	144392659	.	+	.	ID=FBgn0029995.1.mrna1;geneID=FBgn0029995.1.path1;Name=FBgn0029995.1;Dir=sensecoverage=100.0;identity=95.5;matches=899;mismatches=40;indels=2;unknowns=0;locus=RLOC_00012055
Chr1	stalkie_big_nohaplotig	exon	144389694	144390033	94	+	.	Parent=FBgn0029995.1.mrna1;Target=FBgn0029995.1 1 338 +
Chr1	stalkie_big_nohaplotig	exon	144390777	144390900	100	+	.	Parent=FBgn0029995.1.mrna1;Target=FBgn0029995.1 339 462 +
Chr1	stalkie_big_nohaplotig	exon	144392120	144392479	95	+	.	Parent=FBgn0029995.1.mrna1;Target=FBgn0029995.1 463 822 +
Chr1	stalkie_big_nohaplotig	exon	144392543	144392659	94	+	.	Parent=FBgn0029995.1.mrna1;Target=FBgn0029995.1 823 939 +
Chr1	stalkie_big_nohaplotig	CDS	144389759	144390033	.	+	0	Parent=FBgn0029995.1.mrna1;Target=FBgn0029995.1 64 338 +
Chr1	stalkie_big_nohaplotig	CDS	144390777	144390900	.	+	1	Parent=FBgn0029995.1.mrna1;Target=FBgn0029995.1 339 462 +
Chr1	stalkie_big_nohaplotig	CDS	144392120	144392479	.	+	0	Parent=FBgn0029995.1.mrna1;Target=FBgn0029995.1 463 822 +
Chr1	stalkie_big_nohaplotig	CDS	144392543	144392659	.	+	0	Parent=FBgn0029995.1.mrna1;Target=FBgn0029995.1 823 939 +
Chr1	gffcl	locus	144415242	144416478	.	+	.	ID=RLOC_00012056;geneIDs=FBgn0029994.1.path1;transcripts=FBgn0029994.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144415242	144416478	.	+	.	ID=FBgn0029994.1.mrna1;geneID=FBgn0029994.1.path1;Name=FBgn0029994.1;Dir=sensecoverage=94.8;identity=99.7;matches=916;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012056
Chr1	stalkie_big_nohaplotig	exon	144415242	144415541	99	+	.	Parent=FBgn0029994.1.mrna1;Target=FBgn0029994.1 51 350 +
Chr1	stalkie_big_nohaplotig	exon	144415633	144415810	100	+	.	Parent=FBgn0029994.1.mrna1;Target=FBgn0029994.1 351 528 +
Chr1	stalkie_big_nohaplotig	exon	144415972	144416154	98	+	.	Parent=FBgn0029994.1.mrna1;Target=FBgn0029994.1 529 711 +
Chr1	stalkie_big_nohaplotig	exon	144416221	144416478	100	+	.	Parent=FBgn0029994.1.mrna1;Target=FBgn0029994.1 712 969 +
Chr1	stalkie_big_nohaplotig	CDS	144415243	144415541	.	+	0	Parent=FBgn0029994.1.mrna1;Target=FBgn0029994.1 52 350 +
Chr1	stalkie_big_nohaplotig	CDS	144415633	144415810	.	+	1	Parent=FBgn0029994.1.mrna1;Target=FBgn0029994.1 351 528 +
Chr1	stalkie_big_nohaplotig	CDS	144415972	144416154	.	+	0	Parent=FBgn0029994.1.mrna1;Target=FBgn0029994.1 529 711 +
Chr1	stalkie_big_nohaplotig	CDS	144416221	144416478	.	+	0	Parent=FBgn0029994.1.mrna1;Target=FBgn0029994.1 712 969 +
Chr1	gffcl	locus	144417948	144418709	.	-	.	ID=RLOC_00012057;geneIDs=comp150726_c0_seq1.path1;transcripts=comp150726_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144417948	144418709	.	-	.	ID=comp150726_c0_seq1.mrna1;geneID=comp150726_c0_seq1.path1;Name=comp150726_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=761;mismatches=1;indels=0;unknowns=0;Target=comp150726_c0_seq1 762 1 .;CDS_Target=comp150726_c0_seq1 762 604 .;locus=RLOC_00012057
Chr1	stalkie_big_nohaplotig	exon	144417948	144418709	99	-	.	Parent=comp150726_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144417948	144418106	.	-	0	Parent=comp150726_c0_seq1.mrna1
Chr1	gffcl	locus	144418929	144427637	.	-	.	ID=RLOC_00012058;geneIDs=FBgn0029976.1.path1;transcripts=FBgn0029976.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144418929	144427637	.	-	.	ID=FBgn0029976.1.mrna1;geneID=FBgn0029976.1.path1;Name=FBgn0029976.1;Dir=sensecoverage=100.0;identity=99.9;matches=3169;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012058
Chr1	stalkie_big_nohaplotig	exon	144418929	144419192	100	-	.	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 2908 3171 +
Chr1	stalkie_big_nohaplotig	exon	144419245	144419527	100	-	.	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 2625 2907 +
Chr1	stalkie_big_nohaplotig	exon	144419777	144420174	100	-	.	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 2227 2624 +
Chr1	stalkie_big_nohaplotig	exon	144421245	144421382	100	-	.	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 2089 2226 +
Chr1	stalkie_big_nohaplotig	exon	144421810	144421965	100	-	.	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 1933 2088 +
Chr1	stalkie_big_nohaplotig	exon	144422131	144422850	99	-	.	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 1213 1932 +
Chr1	stalkie_big_nohaplotig	exon	144424077	144424222	100	-	.	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 1067 1212 +
Chr1	stalkie_big_nohaplotig	exon	144424291	144424539	99	-	.	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 818 1066 +
Chr1	stalkie_big_nohaplotig	exon	144424600	144424772	100	-	.	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 645 817 +
Chr1	stalkie_big_nohaplotig	exon	144424839	144425015	100	-	.	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 468 644 +
Chr1	stalkie_big_nohaplotig	exon	144426836	144426970	100	-	.	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 333 467 +
Chr1	stalkie_big_nohaplotig	exon	144427069	144427165	100	-	.	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 236 332 +
Chr1	stalkie_big_nohaplotig	exon	144427403	144427637	100	-	.	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 1 235 +
Chr1	stalkie_big_nohaplotig	CDS	144418929	144419192	.	-	0	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 2908 3171 +
Chr1	stalkie_big_nohaplotig	CDS	144419245	144419527	.	-	1	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 2625 2907 +
Chr1	stalkie_big_nohaplotig	CDS	144419777	144420174	.	-	0	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 2227 2624 +
Chr1	stalkie_big_nohaplotig	CDS	144421245	144421382	.	-	0	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 2089 2226 +
Chr1	stalkie_big_nohaplotig	CDS	144421810	144421965	.	-	0	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 1933 2088 +
Chr1	stalkie_big_nohaplotig	CDS	144422131	144422850	.	-	0	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 1213 1932 +
Chr1	stalkie_big_nohaplotig	CDS	144424077	144424222	.	-	2	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 1067 1212 +
Chr1	stalkie_big_nohaplotig	CDS	144424291	144424539	.	-	2	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 818 1066 +
Chr1	stalkie_big_nohaplotig	CDS	144424600	144424772	.	-	1	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 645 817 +
Chr1	stalkie_big_nohaplotig	CDS	144424839	144425015	.	-	1	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 468 644 +
Chr1	stalkie_big_nohaplotig	CDS	144426836	144426970	.	-	1	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 333 467 +
Chr1	stalkie_big_nohaplotig	CDS	144427069	144427165	.	-	2	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 236 332 +
Chr1	stalkie_big_nohaplotig	CDS	144427403	144427637	.	-	0	Parent=FBgn0029976.1.mrna1;Target=FBgn0029976.1 1 235 +
Chr1	gffcl	locus	144429487	144434988	.	+	.	ID=RLOC_00012059;geneIDs=FBgn0030504.1.path1;transcripts=FBgn0030504.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144429487	144434988	.	+	.	ID=FBgn0030504.1.mrna1;geneID=FBgn0030504.1.path1;Name=FBgn0030504.1;Dir=sensecoverage=100.0;identity=99.0;matches=4062;mismatches=42;indels=0;unknowns=0;locus=RLOC_00012059
Chr1	stalkie_big_nohaplotig	exon	144429487	144429631	100	+	.	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 1 145 +
Chr1	stalkie_big_nohaplotig	exon	144429711	144430258	99	+	.	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 146 693 +
Chr1	stalkie_big_nohaplotig	exon	144430313	144430429	97	+	.	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 694 810 +
Chr1	stalkie_big_nohaplotig	exon	144430493	144431286	98	+	.	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 811 1604 +
Chr1	stalkie_big_nohaplotig	exon	144431351	144431966	99	+	.	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 1605 2220 +
Chr1	stalkie_big_nohaplotig	exon	144432125	144432384	97	+	.	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 2221 2480 +
Chr1	stalkie_big_nohaplotig	exon	144432458	144432592	97	+	.	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 2481 2615 +
Chr1	stalkie_big_nohaplotig	exon	144432660	144432819	98	+	.	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 2616 2775 +
Chr1	stalkie_big_nohaplotig	exon	144432888	144433160	98	+	.	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 2776 3048 +
Chr1	stalkie_big_nohaplotig	exon	144433399	144433667	98	+	.	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 3049 3317 +
Chr1	stalkie_big_nohaplotig	exon	144433741	144433919	100	+	.	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 3318 3496 +
Chr1	stalkie_big_nohaplotig	exon	144434217	144434438	99	+	.	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 3497 3718 +
Chr1	stalkie_big_nohaplotig	exon	144434501	144434786	100	+	.	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 3719 4004 +
Chr1	stalkie_big_nohaplotig	exon	144434889	144434988	99	+	.	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 4005 4104 +
Chr1	stalkie_big_nohaplotig	CDS	144429487	144429631	.	+	0	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 1 145 +
Chr1	stalkie_big_nohaplotig	CDS	144429711	144430258	.	+	2	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 146 693 +
Chr1	stalkie_big_nohaplotig	CDS	144430313	144430429	.	+	0	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 694 810 +
Chr1	stalkie_big_nohaplotig	CDS	144430493	144431286	.	+	0	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 811 1604 +
Chr1	stalkie_big_nohaplotig	CDS	144431351	144431966	.	+	1	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 1605 2220 +
Chr1	stalkie_big_nohaplotig	CDS	144432125	144432384	.	+	0	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 2221 2480 +
Chr1	stalkie_big_nohaplotig	CDS	144432458	144432592	.	+	1	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 2481 2615 +
Chr1	stalkie_big_nohaplotig	CDS	144432660	144432819	.	+	1	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 2616 2775 +
Chr1	stalkie_big_nohaplotig	CDS	144432888	144433160	.	+	0	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 2776 3048 +
Chr1	stalkie_big_nohaplotig	CDS	144433399	144433667	.	+	0	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 3049 3317 +
Chr1	stalkie_big_nohaplotig	CDS	144433741	144433919	.	+	1	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 3318 3496 +
Chr1	stalkie_big_nohaplotig	CDS	144434217	144434438	.	+	2	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 3497 3718 +
Chr1	stalkie_big_nohaplotig	CDS	144434501	144434786	.	+	2	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 3719 4004 +
Chr1	stalkie_big_nohaplotig	CDS	144434889	144434988	.	+	1	Parent=FBgn0030504.1.mrna1;Target=FBgn0030504.1 4005 4104 +
Chr1	gffcl	locus	144435349	144437093	.	-	.	ID=RLOC_00012060;geneIDs=FBgn0030503.1.path1;transcripts=FBgn0030503.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144435349	144437093	.	-	.	ID=FBgn0030503.1.mrna1;geneID=FBgn0030503.1.path1;Name=FBgn0030503.1;Dir=sensecoverage=100.0;identity=99.6;matches=989;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012060
Chr1	stalkie_big_nohaplotig	exon	144435349	144435826	99	-	.	Parent=FBgn0030503.1.mrna1;Target=FBgn0030503.1 516 993 +
Chr1	stalkie_big_nohaplotig	exon	144436146	144436389	99	-	.	Parent=FBgn0030503.1.mrna1;Target=FBgn0030503.1 272 515 +
Chr1	stalkie_big_nohaplotig	exon	144436679	144436801	100	-	.	Parent=FBgn0030503.1.mrna1;Target=FBgn0030503.1 149 271 +
Chr1	stalkie_big_nohaplotig	exon	144436946	144437093	100	-	.	Parent=FBgn0030503.1.mrna1;Target=FBgn0030503.1 1 148 +
Chr1	stalkie_big_nohaplotig	CDS	144435349	144435826	.	-	1	Parent=FBgn0030503.1.mrna1;Target=FBgn0030503.1 516 993 +
Chr1	stalkie_big_nohaplotig	CDS	144436146	144436389	.	-	2	Parent=FBgn0030503.1.mrna1;Target=FBgn0030503.1 272 515 +
Chr1	stalkie_big_nohaplotig	CDS	144436679	144436801	.	-	2	Parent=FBgn0030503.1.mrna1;Target=FBgn0030503.1 149 271 +
Chr1	stalkie_big_nohaplotig	CDS	144436946	144437093	.	-	0	Parent=FBgn0030503.1.mrna1;Target=FBgn0030503.1 1 148 +
Chr1	gffcl	locus	144439132	144440483	.	-	.	ID=RLOC_00012061;geneIDs=comp160234_c0_seq1.path1;transcripts=comp160234_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144439132	144440483	.	-	.	ID=comp160234_c0_seq1.mrna1;geneID=comp160234_c0_seq1.path1;Name=comp160234_c0_seq1;Dir=antisensecoverage=100.0;identity=98.4;matches=1101;mismatches=14;indels=4;unknowns=0;locus=RLOC_00012061
Chr1	stalkie_big_nohaplotig	exon	144439132	144439689	99	-	.	Parent=comp160234_c0_seq1.mrna1;Target=comp160234_c0_seq1 1 558 -
Chr1	stalkie_big_nohaplotig	exon	144439759	144439912	98	-	.	Parent=comp160234_c0_seq1.mrna1;Target=comp160234_c0_seq1 559 712 -
Chr1	stalkie_big_nohaplotig	exon	144439981	144440196	98	-	.	Parent=comp160234_c0_seq1.mrna1;Target=comp160234_c0_seq1 713 928 -
Chr1	stalkie_big_nohaplotig	exon	144440293	144440483	94	-	.	Parent=comp160234_c0_seq1.mrna1;Target=comp160234_c0_seq1 929 1115 -
Chr1	stalkie_big_nohaplotig	CDS	144439347	144439689	.	-	1	Parent=comp160234_c0_seq1.mrna1;Target=comp160234_c0_seq1 216 558 .
Chr1	stalkie_big_nohaplotig	CDS	144439759	144439912	.	-	2	Parent=comp160234_c0_seq1.mrna1;Target=comp160234_c0_seq1 559 712 .
Chr1	stalkie_big_nohaplotig	CDS	144439981	144440134	.	-	0	Parent=comp160234_c0_seq1.mrna1;Target=comp160234_c0_seq1 713 866 .
Chr1	gffcl	locus	144481414	144481586	.	+	.	ID=RLOC_00012062;geneIDs=FBgn0259162.1.path1;transcripts=FBgn0259162.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144481414	144481586	.	+	.	ID=FBgn0259162.1.mrna1;geneID=FBgn0259162.1.path1;Name=FBgn0259162.1;Dir=indeterminatecoverage=10.0;identity=99.4;matches=172;mismatches=1;indels=0;unknowns=0;Target=FBgn0259162.1 173 1 .;locus=RLOC_00012062
Chr1	stalkie_big_nohaplotig	exon	144481414	144481586	99	+	.	Parent=FBgn0259162.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144481414	144481586	.	+	0	Parent=FBgn0259162.1.mrna1
Chr1	gffcl	locus	144499274	144507411	.	+	.	ID=RLOC_00012063;geneIDs=FBgn0030505.path1;transcripts=FBgn0030505.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144499274	144507411	.	+	.	ID=FBgn0030505.mrna1;geneID=FBgn0030505.path1;Name=FBgn0030505;Dir=sensecoverage=100.0;identity=99.5;matches=1541;mismatches=4;indels=3;unknowns=0;locus=RLOC_00012063
Chr1	stalkie_big_nohaplotig	exon	144499274	144499434	99	+	.	Parent=FBgn0030505.mrna1;Target=FBgn0030505 1 161 +
Chr1	stalkie_big_nohaplotig	exon	144504965	144505330	99	+	.	Parent=FBgn0030505.mrna1;Target=FBgn0030505 162 524 +
Chr1	stalkie_big_nohaplotig	exon	144505672	144505815	99	+	.	Parent=FBgn0030505.mrna1;Target=FBgn0030505 525 668 +
Chr1	stalkie_big_nohaplotig	exon	144505883	144506165	100	+	.	Parent=FBgn0030505.mrna1;Target=FBgn0030505 669 951 +
Chr1	stalkie_big_nohaplotig	exon	144506672	144506828	99	+	.	Parent=FBgn0030505.mrna1;Target=FBgn0030505 952 1108 +
Chr1	stalkie_big_nohaplotig	exon	144506902	144507113	99	+	.	Parent=FBgn0030505.mrna1;Target=FBgn0030505 1109 1320 +
Chr1	stalkie_big_nohaplotig	exon	144507187	144507411	100	+	.	Parent=FBgn0030505.mrna1;Target=FBgn0030505 1321 1545 +
Chr1	stalkie_big_nohaplotig	CDS	144499274	144499434	.	+	0	Parent=FBgn0030505.mrna1;Target=FBgn0030505 1 161 +
Chr1	stalkie_big_nohaplotig	CDS	144504965	144505330	.	+	1	Parent=FBgn0030505.mrna1;Target=FBgn0030505 162 524 +
Chr1	stalkie_big_nohaplotig	CDS	144505672	144505815	.	+	1	Parent=FBgn0030505.mrna1;Target=FBgn0030505 525 668 +
Chr1	stalkie_big_nohaplotig	CDS	144505883	144506165	.	+	1	Parent=FBgn0030505.mrna1;Target=FBgn0030505 669 951 +
Chr1	stalkie_big_nohaplotig	CDS	144506672	144506828	.	+	0	Parent=FBgn0030505.mrna1;Target=FBgn0030505 952 1108 +
Chr1	stalkie_big_nohaplotig	CDS	144506902	144507113	.	+	2	Parent=FBgn0030505.mrna1;Target=FBgn0030505 1109 1320 +
Chr1	stalkie_big_nohaplotig	CDS	144507187	144507411	.	+	0	Parent=FBgn0030505.mrna1;Target=FBgn0030505 1321 1545 +
Chr1	gffcl	locus	144517121	144520100	.	+	.	ID=RLOC_00012064;geneIDs=comp162914_c0_seq1.path1;transcripts=comp162914_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144517121	144520100	.	+	.	ID=comp162914_c0_seq1.mrna1;geneID=comp162914_c0_seq1.path1;Name=comp162914_c0_seq1;Dir=sensecoverage=99.9;identity=99.2;matches=1729;mismatches=14;indels=0;unknowns=0;locus=RLOC_00012064
Chr1	stalkie_big_nohaplotig	exon	144517121	144518552	99	+	.	Parent=comp162914_c0_seq1.mrna1;Target=comp162914_c0_seq1 1 1432 +
Chr1	stalkie_big_nohaplotig	exon	144518613	144518869	99	+	.	Parent=comp162914_c0_seq1.mrna1;Target=comp162914_c0_seq1 1433 1689 +
Chr1	stalkie_big_nohaplotig	exon	144520047	144520100	98	+	.	Parent=comp162914_c0_seq1.mrna1;Target=comp162914_c0_seq1 1690 1743 +
Chr1	stalkie_big_nohaplotig	CDS	144517123	144518552	.	+	0	Parent=comp162914_c0_seq1.mrna1;Target=comp162914_c0_seq1 3 1432 +
Chr1	stalkie_big_nohaplotig	CDS	144518613	144518869	.	+	1	Parent=comp162914_c0_seq1.mrna1;Target=comp162914_c0_seq1 1433 1689 +
Chr1	stalkie_big_nohaplotig	CDS	144520047	144520051	.	+	2	Parent=comp162914_c0_seq1.mrna1;Target=comp162914_c0_seq1 1690 1694 +
Chr1	gffcl	locus	144520871	144522474	.	+	.	ID=RLOC_00012065;geneIDs=comp162500_c0_seq1.path1;transcripts=comp162500_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144520871	144522474	.	+	.	ID=comp162500_c0_seq1.mrna1;geneID=comp162500_c0_seq1.path1;Name=comp162500_c0_seq1;Dir=indeterminatecoverage=78.4;identity=87.4;matches=1530;mismatches=64;indels=157;unknowns=0;Target=comp162500_c0_seq1 2201 461 .;CDS_Target=comp162500_c0_seq1 1246 1211 .;locus=RLOC_00012065
Chr1	stalkie_big_nohaplotig	exon	144520871	144522474	87	+	.	Parent=comp162500_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144521515	144521549	.	+	0	Parent=comp162500_c0_seq1.mrna1
Chr1	gffcl	locus	144523852	144524203	.	+	.	ID=RLOC_00012066;geneIDs=comp116954_c0_seq1.path1;transcripts=comp116954_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144523852	144524203	.	+	.	ID=comp116954_c0_seq1.mrna1;geneID=comp116954_c0_seq1.path1;Name=comp116954_c0_seq1;Dir=indeterminatecoverage=96.5;identity=96.8;matches=243;mismatches=8;indels=0;unknowns=0;Target=comp116954_c0_seq1 149 90 .;locus=RLOC_00012066
Chr1	stalkie_big_nohaplotig	exon	144523852	144524005	97	+	.	Parent=comp116954_c0_seq1.mrna1;Target=comp116954_c0_seq1 154 1 .
Chr1	stalkie_big_nohaplotig	exon	144524107	144524203	95	+	.	Parent=comp116954_c0_seq1.mrna1;Target=comp116954_c0_seq1 251 155 .
Chr1	stalkie_big_nohaplotig	CDS	144523941	144524000	.	+	0	Parent=comp116954_c0_seq1.mrna1
Chr1	gffcl	locus	144524753	144547771	.	+	.	ID=RLOC_00012067;geneIDs=comp158140_c0_seq1.path1;transcripts=comp158140_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144524753	144547771	.	+	.	ID=comp158140_c0_seq1.mrna1;geneID=comp158140_c0_seq1.path1;Name=comp158140_c0_seq1;Dir=sensecoverage=55.4;identity=73.2;matches=361;mismatches=34;indels=98;unknowns=0;Target=comp158140_c0_seq1 116 223 +;locus=RLOC_00012067
Chr1	stalkie_big_nohaplotig	exon	144524753	144525018	81	+	.	Parent=comp158140_c0_seq1.mrna1;Target=comp158140_c0_seq1 1 293 +
Chr1	stalkie_big_nohaplotig	exon	144527277	144527315	66	+	.	Parent=comp158140_c0_seq1.mrna1;Target=comp158140_c0_seq1 294 328 +
Chr1	stalkie_big_nohaplotig	exon	144529196	144529200	100	+	.	Parent=comp158140_c0_seq1.mrna1;Target=comp158140_c0_seq1 329 333 +
Chr1	stalkie_big_nohaplotig	exon	144532795	144532805	100	+	.	Parent=comp158140_c0_seq1.mrna1;Target=comp158140_c0_seq1 334 344 +
Chr1	stalkie_big_nohaplotig	exon	144533832	144533847	66	+	.	Parent=comp158140_c0_seq1.mrna1;Target=comp158140_c0_seq1 347 363 +
Chr1	stalkie_big_nohaplotig	exon	144538721	144538790	33	+	.	Parent=comp158140_c0_seq1.mrna1;Target=comp158140_c0_seq1 364 389 +
Chr1	stalkie_big_nohaplotig	exon	144541987	144541988	100	+	.	Parent=comp158140_c0_seq1.mrna1;Target=comp158140_c0_seq1 390 391 +
Chr1	stalkie_big_nohaplotig	exon	144542740	144542743	100	+	.	Parent=comp158140_c0_seq1.mrna1;Target=comp158140_c0_seq1 392 395 +
Chr1	stalkie_big_nohaplotig	exon	144545002	144545037	70	+	.	Parent=comp158140_c0_seq1.mrna1;Target=comp158140_c0_seq1 396 427 +
Chr1	stalkie_big_nohaplotig	exon	144547765	144547771	100	+	.	Parent=comp158140_c0_seq1.mrna1;Target=comp158140_c0_seq1 428 434 +
Chr1	stalkie_big_nohaplotig	CDS	144524871	144524980	.	+	0	Parent=comp158140_c0_seq1.mrna1
Chr1	gffcl	locus	144526028	144526385	.	+	.	ID=RLOC_00012068;geneIDs=comp116342_c0_seq1.path1;transcripts=comp116342_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144526028	144526385	.	+	.	ID=comp116342_c0_seq1.mrna1;geneID=comp116342_c0_seq1.path1;Name=comp116342_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=357;mismatches=1;indels=0;unknowns=0;Target=comp116342_c0_seq1 358 1 .;CDS_Target=comp116342_c0_seq1 104 3 .;locus=RLOC_00012068
Chr1	stalkie_big_nohaplotig	exon	144526028	144526385	99	+	.	Parent=comp116342_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144526030	144526131	.	+	0	Parent=comp116342_c0_seq1.mrna1
Chr1	gffcl	locus	144526460	144526878	.	+	.	ID=RLOC_00012069;geneIDs=comp149647_c0_seq1.path1;transcripts=comp149647_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144526460	144526878	.	+	.	ID=comp149647_c0_seq1.mrna1;geneID=comp149647_c0_seq1.path1;Name=comp149647_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.5;matches=407;mismatches=9;indels=10;unknowns=0;Target=comp149647_c0_seq1 423 1 .;CDS_Target=comp149647_c0_seq1 53 3 .;locus=RLOC_00012069
Chr1	stalkie_big_nohaplotig	exon	144526460	144526878	95	+	.	Parent=comp149647_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144526462	144526515	.	+	0	Parent=comp149647_c0_seq1.mrna1
Chr1	gffcl	locus	144529428	144530195	.	+	.	ID=RLOC_00012070;geneIDs=ORF3107.path1;transcripts=ORF3107.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144529428	144530195	.	+	.	ID=ORF3107.mrna1;geneID=ORF3107.path1;Name=ORF3107;Dir=indeterminatecoverage=100.0;identity=99.2;matches=762;mismatches=6;indels=0;unknowns=0;Target=ORF3107 768 1 .;locus=RLOC_00012070
Chr1	stalkie_big_nohaplotig	exon	144529428	144530195	99	+	.	Parent=ORF3107.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144529428	144530195	.	+	0	Parent=ORF3107.mrna1
Chr1	gffcl	locus	144547937	144548047	.	+	.	ID=RLOC_00012071;geneIDs=FBgn0026374.1.path1;transcripts=FBgn0026374.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144547937	144548047	.	+	.	ID=FBgn0026374.1.mrna1;geneID=FBgn0026374.1.path1;Name=FBgn0026374.1;Dir=indeterminatecoverage=5.1;identity=100.0;matches=111;mismatches=0;indels=0;unknowns=0;Target=FBgn0026374.1 111 1 .;locus=RLOC_00012071
Chr1	stalkie_big_nohaplotig	exon	144547937	144548047	100	+	.	Parent=FBgn0026374.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144547937	144548047	.	+	0	Parent=FBgn0026374.1.mrna1
Chr1	gffcl	locus	144615123	144615343	.	-	.	ID=RLOC_00012072;geneIDs=comp147807_c0_seq1.path1;transcripts=comp147807_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144615123	144615343	.	-	.	ID=comp147807_c0_seq1.mrna1;geneID=comp147807_c0_seq1.path1;Name=comp147807_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.5;matches=200;mismatches=21;indels=0;unknowns=0;Target=comp147807_c0_seq1 221 1 .;CDS_Target=comp147807_c0_seq1 219 112 .;locus=RLOC_00012072
Chr1	stalkie_big_nohaplotig	exon	144615123	144615343	90	-	.	Parent=comp147807_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144615125	144615232	.	-	0	Parent=comp147807_c0_seq1.mrna1
Chr1	gffcl	locus	144617108	144618090	.	+	.	ID=RLOC_00012073;geneIDs=comp151858_c0_seq1.path1;transcripts=comp151858_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144617108	144618090	.	+	.	ID=comp151858_c0_seq1.mrna1;geneID=comp151858_c0_seq1.path1;Name=comp151858_c0_seq1;Dir=sensecoverage=99.2;identity=98.6;matches=507;mismatches=7;indels=0;unknowns=0;Target=comp151858_c0_seq1 233 430 +;locus=RLOC_00012073
Chr1	stalkie_big_nohaplotig	exon	144617108	144617321	99	+	.	Parent=comp151858_c0_seq1.mrna1;Target=comp151858_c0_seq1 5 218 +
Chr1	stalkie_big_nohaplotig	exon	144617791	144618090	98	+	.	Parent=comp151858_c0_seq1.mrna1;Target=comp151858_c0_seq1 219 518 +
Chr1	stalkie_big_nohaplotig	CDS	144617805	144618002	.	+	0	Parent=comp151858_c0_seq1.mrna1
Chr1	gffcl	locus	144670221	144691427	.	+	.	ID=RLOC_00012074;geneIDs=FBgn0259223.1.path1;transcripts=FBgn0259223.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144670221	144691427	.	+	.	ID=FBgn0259223.1.mrna1;geneID=FBgn0259223.1.path1;Name=FBgn0259223.1;Dir=sensecoverage=100.0;identity=99.6;matches=804;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012074
Chr1	stalkie_big_nohaplotig	exon	144670221	144670295	100	+	.	Parent=FBgn0259223.1.mrna1;Target=FBgn0259223.1 1 75 +
Chr1	stalkie_big_nohaplotig	exon	144678742	144678982	99	+	.	Parent=FBgn0259223.1.mrna1;Target=FBgn0259223.1 76 316 +
Chr1	stalkie_big_nohaplotig	exon	144679198	144679518	99	+	.	Parent=FBgn0259223.1.mrna1;Target=FBgn0259223.1 317 637 +
Chr1	stalkie_big_nohaplotig	exon	144691139	144691241	100	+	.	Parent=FBgn0259223.1.mrna1;Target=FBgn0259223.1 638 740 +
Chr1	stalkie_big_nohaplotig	exon	144691361	144691427	100	+	.	Parent=FBgn0259223.1.mrna1;Target=FBgn0259223.1 741 807 +
Chr1	stalkie_big_nohaplotig	CDS	144670221	144670295	.	+	0	Parent=FBgn0259223.1.mrna1;Target=FBgn0259223.1 1 75 +
Chr1	stalkie_big_nohaplotig	CDS	144678742	144678982	.	+	0	Parent=FBgn0259223.1.mrna1;Target=FBgn0259223.1 76 316 +
Chr1	stalkie_big_nohaplotig	CDS	144679198	144679518	.	+	2	Parent=FBgn0259223.1.mrna1;Target=FBgn0259223.1 317 637 +
Chr1	stalkie_big_nohaplotig	CDS	144691139	144691241	.	+	2	Parent=FBgn0259223.1.mrna1;Target=FBgn0259223.1 638 740 +
Chr1	stalkie_big_nohaplotig	CDS	144691361	144691427	.	+	1	Parent=FBgn0259223.1.mrna1;Target=FBgn0259223.1 741 807 +
Chr1	gffcl	locus	144703494	144706164	.	-	.	ID=RLOC_00012075;geneIDs=comp155867_c0_seq1.path1;transcripts=comp155867_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144703494	144706164	.	-	.	ID=comp155867_c0_seq1.mrna1;geneID=comp155867_c0_seq1.path1;Name=comp155867_c0_seq1;Dir=sensecoverage=99.9;identity=99.2;matches=994;mismatches=7;indels=1;unknowns=0;Target=comp155867_c0_seq1 167 778 +;locus=RLOC_00012075
Chr1	stalkie_big_nohaplotig	exon	144703494	144703695	98	-	.	Parent=comp155867_c0_seq1.mrna1;Target=comp155867_c0_seq1 801 1003 +
Chr1	stalkie_big_nohaplotig	exon	144703802	144704527	99	-	.	Parent=comp155867_c0_seq1.mrna1;Target=comp155867_c0_seq1 75 800 +
Chr1	stalkie_big_nohaplotig	exon	144706092	144706164	100	-	.	Parent=comp155867_c0_seq1.mrna1;Target=comp155867_c0_seq1 2 74 +
Chr1	stalkie_big_nohaplotig	CDS	144703824	144704435	.	-	0	Parent=comp155867_c0_seq1.mrna1
Chr1	gffcl	locus	144707434	144708406	.	-	.	ID=RLOC_00012076;geneIDs=ORF2190.path1;transcripts=ORF2190.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144707434	144708406	.	-	.	ID=ORF2190.mrna1;geneID=ORF2190.path1;Name=ORF2190;Dir=sensecoverage=100.0;identity=99.6;matches=896;mismatches=3;indels=1;unknowns=0;locus=RLOC_00012076
Chr1	stalkie_big_nohaplotig	exon	144707434	144708231	99	-	.	Parent=ORF2190.mrna1;Target=ORF2190 103 900 +
Chr1	stalkie_big_nohaplotig	exon	144708306	144708406	99	-	.	Parent=ORF2190.mrna1;Target=ORF2190 1 102 +
Chr1	stalkie_big_nohaplotig	CDS	144707434	144708231	.	-	0	Parent=ORF2190.mrna1;Target=ORF2190 103 900 +
Chr1	stalkie_big_nohaplotig	CDS	144708306	144708371	.	-	0	Parent=ORF2190.mrna1;Target=ORF2190 37 102 +
Chr1	gffcl	locus	144708812	144709704	.	-	.	ID=RLOC_00012077;geneIDs=comp152648_c0_seq1.path1;transcripts=comp152648_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144708812	144709704	.	-	.	ID=comp152648_c0_seq1.mrna1;geneID=comp152648_c0_seq1.path1;Name=comp152648_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=889;mismatches=4;indels=0;unknowns=0;Target=comp152648_c0_seq1 893 1 .;CDS_Target=comp152648_c0_seq1 875 771 .;locus=RLOC_00012077
Chr1	stalkie_big_nohaplotig	exon	144708812	144709704	99	-	.	Parent=comp152648_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144708830	144708934	.	-	0	Parent=comp152648_c0_seq1.mrna1
Chr1	gffcl	locus	144711296	144712223	.	+	.	ID=RLOC_00012078;geneIDs=comp156849_c0_seq1.path1;transcripts=comp156849_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144711296	144712223	.	+	.	ID=comp156849_c0_seq1.mrna1;geneID=comp156849_c0_seq1.path1;Name=comp156849_c0_seq1;Dir=antisensecoverage=95.4;identity=98.8;matches=856;mismatches=10;indels=0;unknowns=0;locus=RLOC_00012078
Chr1	stalkie_big_nohaplotig	exon	144711296	144711482	99	+	.	Parent=comp156849_c0_seq1.mrna1;Target=comp156849_c0_seq1 722 908 -
Chr1	stalkie_big_nohaplotig	exon	144711545	144712223	98	+	.	Parent=comp156849_c0_seq1.mrna1;Target=comp156849_c0_seq1 43 721 -
Chr1	stalkie_big_nohaplotig	CDS	144711408	144711482	.	+	0	Parent=comp156849_c0_seq1.mrna1;Target=comp156849_c0_seq1 722 796 .
Chr1	stalkie_big_nohaplotig	CDS	144711545	144712096	.	+	0	Parent=comp156849_c0_seq1.mrna1;Target=comp156849_c0_seq1 170 721 .
Chr1	gffcl	locus	144713876	144715428	.	+	.	ID=RLOC_00012079;geneIDs=comp150921_c0_seq1.path1,comp152117_c0_seq1.path1;transcripts=comp152117_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144713876	144714731	.	+	.	ID=comp152117_c0_seq1.mrna1;geneID=comp152117_c0_seq1.path1;Name=comp152117_c0_seq1;Dir=sensecoverage=100.0;identity=97.3;matches=761;mismatches=5;indels=16;unknowns=0;locus=RLOC_00012079
Chr1	stalkie_big_nohaplotig	exon	144713876	144714019	100	+	.	Parent=comp152117_c0_seq1.mrna1;Target=comp152117_c0_seq1 1 144 +
Chr1	stalkie_big_nohaplotig	exon	144714094	144714731	96	+	.	Parent=comp152117_c0_seq1.mrna1;Target=comp152117_c0_seq1 145 766 +
Chr1	stalkie_big_nohaplotig	CDS	144713942	144714019	.	+	0	Parent=comp152117_c0_seq1.mrna1;Target=comp152117_c0_seq1 67 144 +
Chr1	stalkie_big_nohaplotig	CDS	144714094	144714486	.	+	0	Parent=comp152117_c0_seq1.mrna1;Target=comp152117_c0_seq1 145 537 +
Chr1	gffcl	locus	144716970	144717563	.	+	.	ID=RLOC_00012080;geneIDs=comp152367_c0_seq1.path1;transcripts=comp152367_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144716970	144717563	.	+	.	ID=comp152367_c0_seq1.mrna1;geneID=comp152367_c0_seq1.path1;Name=comp152367_c0_seq1;Dir=sensecoverage=100.0;identity=97.0;matches=510;mismatches=14;indels=2;unknowns=0;locus=RLOC_00012080
Chr1	stalkie_big_nohaplotig	exon	144716970	144717174	99	+	.	Parent=comp152367_c0_seq1.mrna1;Target=comp152367_c0_seq1 1 205 +
Chr1	stalkie_big_nohaplotig	exon	144717243	144717563	95	+	.	Parent=comp152367_c0_seq1.mrna1;Target=comp152367_c0_seq1 206 524 +
Chr1	stalkie_big_nohaplotig	CDS	144717067	144717174	.	+	0	Parent=comp152367_c0_seq1.mrna1;Target=comp152367_c0_seq1 98 205 +
Chr1	stalkie_big_nohaplotig	CDS	144717243	144717539	.	+	0	Parent=comp152367_c0_seq1.mrna1;Target=comp152367_c0_seq1 206 502 +
Chr1	gffcl	locus	144720494	144721107	.	+	.	ID=RLOC_00012081;geneIDs=comp152422_c0_seq1.path1;transcripts=comp152422_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144720494	144721107	.	+	.	ID=comp152422_c0_seq1.mrna1;geneID=comp152422_c0_seq1.path1;Name=comp152422_c0_seq1;Dir=antisensecoverage=100.0;identity=97.8;matches=539;mismatches=11;indels=1;unknowns=0;locus=RLOC_00012081
Chr1	stalkie_big_nohaplotig	exon	144720494	144720671	97	+	.	Parent=comp152422_c0_seq1.mrna1;Target=comp152422_c0_seq1 374 550 -
Chr1	stalkie_big_nohaplotig	exon	144720735	144721107	97	+	.	Parent=comp152422_c0_seq1.mrna1;Target=comp152422_c0_seq1 1 373 -
Chr1	stalkie_big_nohaplotig	CDS	144720603	144720671	.	+	0	Parent=comp152422_c0_seq1.mrna1;Target=comp152422_c0_seq1 374 442 .
Chr1	stalkie_big_nohaplotig	CDS	144720735	144720947	.	+	0	Parent=comp152422_c0_seq1.mrna1;Target=comp152422_c0_seq1 161 373 .
Chr1	gffcl	locus	144733587	144738861	.	-	.	ID=RLOC_00012082;geneIDs=FBgn0052547.1.path1;transcripts=FBgn0052547.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144733587	144738861	.	-	.	ID=FBgn0052547.1.mrna1;geneID=FBgn0052547.1.path1;Name=FBgn0052547.1;Dir=sensecoverage=99.9;identity=99.5;matches=2202;mismatches=12;indels=0;unknowns=0;locus=RLOC_00012082
Chr1	stalkie_big_nohaplotig	exon	144733587	144735189	99	-	.	Parent=FBgn0052547.1.mrna1;Target=FBgn0052547.1 615 2217 +
Chr1	stalkie_big_nohaplotig	exon	144736270	144736662	99	-	.	Parent=FBgn0052547.1.mrna1;Target=FBgn0052547.1 222 614 +
Chr1	stalkie_big_nohaplotig	exon	144738348	144738473	99	-	.	Parent=FBgn0052547.1.mrna1;Target=FBgn0052547.1 96 221 +
Chr1	stalkie_big_nohaplotig	exon	144738770	144738861	98	-	.	Parent=FBgn0052547.1.mrna1;Target=FBgn0052547.1 4 95 +
Chr1	stalkie_big_nohaplotig	CDS	144733587	144735189	.	-	1	Parent=FBgn0052547.1.mrna1;Target=FBgn0052547.1 615 2217 +
Chr1	stalkie_big_nohaplotig	CDS	144736270	144736662	.	-	1	Parent=FBgn0052547.1.mrna1;Target=FBgn0052547.1 222 614 +
Chr1	stalkie_big_nohaplotig	CDS	144738348	144738473	.	-	1	Parent=FBgn0052547.1.mrna1;Target=FBgn0052547.1 96 221 +
Chr1	stalkie_big_nohaplotig	CDS	144738770	144738861	.	-	0	Parent=FBgn0052547.1.mrna1;Target=FBgn0052547.1 4 95 +
Chr1	gffcl	locus	144812740	144820156	.	-	.	ID=RLOC_00012083;geneIDs=comp161350_c1_seq1.path1;transcripts=comp161350_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144812740	144820156	.	-	.	ID=comp161350_c1_seq1.mrna1;geneID=comp161350_c1_seq1.path1;Name=comp161350_c1_seq1;Dir=antisensecoverage=97.9;identity=99.1;matches=564;mismatches=5;indels=0;unknowns=0;locus=RLOC_00012083
Chr1	stalkie_big_nohaplotig	exon	144812740	144812776	100	-	.	Parent=comp161350_c1_seq1.mrna1;Target=comp161350_c1_seq1 1 37 -
Chr1	stalkie_big_nohaplotig	exon	144813163	144813233	98	-	.	Parent=comp161350_c1_seq1.mrna1;Target=comp161350_c1_seq1 38 108 -
Chr1	stalkie_big_nohaplotig	exon	144813294	144813350	100	-	.	Parent=comp161350_c1_seq1.mrna1;Target=comp161350_c1_seq1 109 165 -
Chr1	stalkie_big_nohaplotig	exon	144813406	144813432	96	-	.	Parent=comp161350_c1_seq1.mrna1;Target=comp161350_c1_seq1 166 192 -
Chr1	stalkie_big_nohaplotig	exon	144813495	144813536	97	-	.	Parent=comp161350_c1_seq1.mrna1;Target=comp161350_c1_seq1 193 234 -
Chr1	stalkie_big_nohaplotig	exon	144815070	144815250	100	-	.	Parent=comp161350_c1_seq1.mrna1;Target=comp161350_c1_seq1 235 415 -
Chr1	stalkie_big_nohaplotig	exon	144815965	144816100	98	-	.	Parent=comp161350_c1_seq1.mrna1;Target=comp161350_c1_seq1 416 551 -
Chr1	stalkie_big_nohaplotig	exon	144820139	144820156	100	-	.	Parent=comp161350_c1_seq1.mrna1;Target=comp161350_c1_seq1 552 569 -
Chr1	stalkie_big_nohaplotig	CDS	144812742	144812776	.	-	2	Parent=comp161350_c1_seq1.mrna1;Target=comp161350_c1_seq1 3 37 .
Chr1	stalkie_big_nohaplotig	CDS	144813163	144813233	.	-	1	Parent=comp161350_c1_seq1.mrna1;Target=comp161350_c1_seq1 38 108 .
Chr1	stalkie_big_nohaplotig	CDS	144813294	144813350	.	-	1	Parent=comp161350_c1_seq1.mrna1;Target=comp161350_c1_seq1 109 165 .
Chr1	stalkie_big_nohaplotig	CDS	144813406	144813432	.	-	1	Parent=comp161350_c1_seq1.mrna1;Target=comp161350_c1_seq1 166 192 .
Chr1	stalkie_big_nohaplotig	CDS	144813495	144813536	.	-	1	Parent=comp161350_c1_seq1.mrna1;Target=comp161350_c1_seq1 193 234 .
Chr1	stalkie_big_nohaplotig	CDS	144815070	144815250	.	-	2	Parent=comp161350_c1_seq1.mrna1;Target=comp161350_c1_seq1 235 415 .
Chr1	stalkie_big_nohaplotig	CDS	144815965	144816073	.	-	0	Parent=comp161350_c1_seq1.mrna1;Target=comp161350_c1_seq1 416 524 .
Chr1	gffcl	locus	144824306	144825582	.	-	.	ID=RLOC_00012084;geneIDs=comp149528_c0_seq1.path1;transcripts=comp149528_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144824306	144825582	.	-	.	ID=comp149528_c0_seq1.mrna1;geneID=comp149528_c0_seq1.path1;Name=comp149528_c0_seq1;Dir=antisensecoverage=100.0;identity=96.5;matches=382;mismatches=11;indels=3;unknowns=0;locus=RLOC_00012084
Chr1	stalkie_big_nohaplotig	exon	144824306	144824496	97	-	.	Parent=comp149528_c0_seq1.mrna1;Target=comp149528_c0_seq1 1 191 -
Chr1	stalkie_big_nohaplotig	exon	144825378	144825582	95	-	.	Parent=comp149528_c0_seq1.mrna1;Target=comp149528_c0_seq1 192 393 -
Chr1	stalkie_big_nohaplotig	CDS	144824306	144824496	.	-	2	Parent=comp149528_c0_seq1.mrna1;Target=comp149528_c0_seq1 1 191 .
Chr1	stalkie_big_nohaplotig	CDS	144825378	144825417	.	-	0	Parent=comp149528_c0_seq1.mrna1;Target=comp149528_c0_seq1 192 231 .
Chr1	gffcl	locus	144827503	144834588	.	-	.	ID=RLOC_00012085;geneIDs=FBgn0030925.5.path1;transcripts=FBgn0030925.5.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144827503	144834588	.	-	.	ID=FBgn0030925.5.mrna1;geneID=FBgn0030925.5.path1;Name=FBgn0030925.5;Dir=sensecoverage=99.9;identity=99.4;matches=1227;mismatches=8;indels=0;unknowns=0;locus=RLOC_00012085
Chr1	stalkie_big_nohaplotig	exon	144827503	144827839	99	-	.	Parent=FBgn0030925.5.mrna1;Target=FBgn0030925.5 899 1235 +
Chr1	stalkie_big_nohaplotig	exon	144827907	144828090	98	-	.	Parent=FBgn0030925.5.mrna1;Target=FBgn0030925.5 715 898 +
Chr1	stalkie_big_nohaplotig	exon	144828176	144828468	99	-	.	Parent=FBgn0030925.5.mrna1;Target=FBgn0030925.5 422 714 +
Chr1	stalkie_big_nohaplotig	exon	144830595	144830683	97	-	.	Parent=FBgn0030925.5.mrna1;Target=FBgn0030925.5 333 421 +
Chr1	stalkie_big_nohaplotig	exon	144832175	144832385	99	-	.	Parent=FBgn0030925.5.mrna1;Target=FBgn0030925.5 122 332 +
Chr1	stalkie_big_nohaplotig	exon	144834468	144834588	99	-	.	Parent=FBgn0030925.5.mrna1;Target=FBgn0030925.5 1 121 +
Chr1	stalkie_big_nohaplotig	CDS	144827505	144827839	.	-	2	Parent=FBgn0030925.5.mrna1;Target=FBgn0030925.5 899 1233 +
Chr1	stalkie_big_nohaplotig	CDS	144827907	144828090	.	-	0	Parent=FBgn0030925.5.mrna1;Target=FBgn0030925.5 715 898 +
Chr1	stalkie_big_nohaplotig	CDS	144828176	144828468	.	-	2	Parent=FBgn0030925.5.mrna1;Target=FBgn0030925.5 422 714 +
Chr1	stalkie_big_nohaplotig	CDS	144830595	144830683	.	-	1	Parent=FBgn0030925.5.mrna1;Target=FBgn0030925.5 333 421 +
Chr1	stalkie_big_nohaplotig	CDS	144832175	144832385	.	-	2	Parent=FBgn0030925.5.mrna1;Target=FBgn0030925.5 122 332 +
Chr1	stalkie_big_nohaplotig	CDS	144834468	144834588	.	-	0	Parent=FBgn0030925.5.mrna1;Target=FBgn0030925.5 1 121 +
Chr1	gffcl	locus	144843559	144844327	.	+	.	ID=RLOC_00012086;geneIDs=comp135250_c0_seq1.path1;transcripts=comp135250_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144843559	144844327	.	+	.	ID=comp135250_c0_seq1.mrna1;geneID=comp135250_c0_seq1.path1;Name=comp135250_c0_seq1;Dir=antisensecoverage=95.5;identity=98.9;matches=690;mismatches=7;indels=1;unknowns=0;locus=RLOC_00012086
Chr1	stalkie_big_nohaplotig	exon	144843559	144843812	99	+	.	Parent=comp135250_c0_seq1.mrna1;Target=comp135250_c0_seq1 478 731 -
Chr1	stalkie_big_nohaplotig	exon	144843885	144844327	98	+	.	Parent=comp135250_c0_seq1.mrna1;Target=comp135250_c0_seq1 34 477 -
Chr1	stalkie_big_nohaplotig	CDS	144843671	144843812	.	+	0	Parent=comp135250_c0_seq1.mrna1;Target=comp135250_c0_seq1 478 619 .
Chr1	stalkie_big_nohaplotig	CDS	144843885	144844174	.	+	2	Parent=comp135250_c0_seq1.mrna1;Target=comp135250_c0_seq1 188 477 .
Chr1	gffcl	locus	144853013	144853414	.	-	.	ID=RLOC_00012088;geneIDs=comp117199_c0_seq1.path1;transcripts=comp117199_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144853013	144853414	.	-	.	ID=comp117199_c0_seq1.mrna1;geneID=comp117199_c0_seq1.path1;Name=comp117199_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=400;mismatches=2;indels=0;unknowns=0;Target=comp117199_c0_seq1 402 1 .;CDS_Target=comp117199_c0_seq1 323 201 .;locus=RLOC_00012088
Chr1	stalkie_big_nohaplotig	exon	144853013	144853414	99	-	.	Parent=comp117199_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144853092	144853214	.	-	0	Parent=comp117199_c0_seq1.mrna1
Chr1	gffcl	locus	144859116	144860238	.	+	.	ID=RLOC_00012089;geneIDs=comp157574_c0_seq1.path1;transcripts=comp157574_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144859116	144860238	.	+	.	ID=comp157574_c0_seq1.mrna1;geneID=comp157574_c0_seq1.path1;Name=comp157574_c0_seq1;Dir=antisensecoverage=99.8;identity=99.2;matches=1061;mismatches=9;indels=0;unknowns=0;Target=comp157574_c0_seq1 367 960 .;locus=RLOC_00012089
Chr1	stalkie_big_nohaplotig	exon	144859116	144859822	99	+	.	Parent=comp157574_c0_seq1.mrna1;Target=comp157574_c0_seq1 366 1072 -
Chr1	stalkie_big_nohaplotig	exon	144859876	144860238	99	+	.	Parent=comp157574_c0_seq1.mrna1;Target=comp157574_c0_seq1 3 365 -
Chr1	stalkie_big_nohaplotig	CDS	144859228	144859821	.	+	0	Parent=comp157574_c0_seq1.mrna1
Chr1	gffcl	locus	144864160	144865943	.	-	.	ID=RLOC_00012090;geneIDs=comp74384_c0_seq1.path1;transcripts=comp74384_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144864160	144865943	.	-	.	ID=comp74384_c0_seq1.mrna1;geneID=comp74384_c0_seq1.path1;Name=comp74384_c0_seq1;Dir=sensecoverage=99.9;identity=98.3;matches=797;mismatches=9;indels=5;unknowns=0;locus=RLOC_00012090
Chr1	stalkie_big_nohaplotig	exon	144864160	144864222	95	-	.	Parent=comp74384_c0_seq1.mrna1;Target=comp74384_c0_seq1 749 811 +
Chr1	stalkie_big_nohaplotig	exon	144864283	144864794	99	-	.	Parent=comp74384_c0_seq1.mrna1;Target=comp74384_c0_seq1 237 748 +
Chr1	stalkie_big_nohaplotig	exon	144865713	144865943	96	-	.	Parent=comp74384_c0_seq1.mrna1;Target=comp74384_c0_seq1 1 236 +
Chr1	stalkie_big_nohaplotig	CDS	144864203	144864222	.	-	2	Parent=comp74384_c0_seq1.mrna1;Target=comp74384_c0_seq1 749 768 +
Chr1	stalkie_big_nohaplotig	CDS	144864283	144864794	.	-	1	Parent=comp74384_c0_seq1.mrna1;Target=comp74384_c0_seq1 237 748 +
Chr1	stalkie_big_nohaplotig	CDS	144865713	144865822	.	-	0	Parent=comp74384_c0_seq1.mrna1;Target=comp74384_c0_seq1 127 236 +
Chr1	gffcl	locus	144868328	144870429	.	-	.	ID=RLOC_00012091;geneIDs=FBgn0030929.1.path1;transcripts=FBgn0030929.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144868328	144870429	.	-	.	ID=FBgn0030929.1.mrna1;geneID=FBgn0030929.1.path1;Name=FBgn0030929.1;Dir=sensecoverage=100.0;identity=99.4;matches=507;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012091
Chr1	stalkie_big_nohaplotig	exon	144868328	144868581	98	-	.	Parent=FBgn0030929.1.mrna1;Target=FBgn0030929.1 257 510 +
Chr1	stalkie_big_nohaplotig	exon	144870174	144870429	100	-	.	Parent=FBgn0030929.1.mrna1;Target=FBgn0030929.1 1 256 +
Chr1	stalkie_big_nohaplotig	CDS	144868328	144868581	.	-	2	Parent=FBgn0030929.1.mrna1;Target=FBgn0030929.1 257 510 +
Chr1	stalkie_big_nohaplotig	CDS	144870174	144870429	.	-	0	Parent=FBgn0030929.1.mrna1;Target=FBgn0030929.1 1 256 +
Chr1	gffcl	locus	144873713	144879601	.	-	.	ID=RLOC_00012092;geneIDs=FBgn0030930.1.path1,comp162059_c2_seq1.path1;transcripts=comp162059_c2_seq1.mrna1,FBgn0030930.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144873713	144879601	.	-	.	ID=comp162059_c2_seq1.mrna1;geneID=comp162059_c2_seq1.path1;Name=comp162059_c2_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=2995;mismatches=8;indels=10;unknowns=0;locus=RLOC_00012092
Chr1	stalkie_big_nohaplotig	exon	144873713	144875590	99	-	.	Parent=comp162059_c2_seq1.mrna1;Target=comp162059_c2_seq1 1127 3005 +
Chr1	stalkie_big_nohaplotig	exon	144875656	144876132	99	-	.	Parent=comp162059_c2_seq1.mrna1;Target=comp162059_c2_seq1 650 1126 +
Chr1	stalkie_big_nohaplotig	exon	144878846	144879287	99	-	.	Parent=comp162059_c2_seq1.mrna1;Target=comp162059_c2_seq1 208 649 +
Chr1	stalkie_big_nohaplotig	exon	144879388	144879601	96	-	.	Parent=comp162059_c2_seq1.mrna1;Target=comp162059_c2_seq1 1 207 +
Chr1	stalkie_big_nohaplotig	CDS	144874482	144875590	.	-	2	Parent=comp162059_c2_seq1.mrna1;Target=comp162059_c2_seq1 1127 2235 +
Chr1	stalkie_big_nohaplotig	CDS	144875656	144876132	.	-	2	Parent=comp162059_c2_seq1.mrna1;Target=comp162059_c2_seq1 650 1126 +
Chr1	stalkie_big_nohaplotig	CDS	144878846	144879062	.	-	0	Parent=comp162059_c2_seq1.mrna1;Target=comp162059_c2_seq1 433 649 +
Chr1	stalkie_big_nohaplotig	mRNA	144874190	144879089	.	-	.	ID=FBgn0030930.1.mrna1;geneID=FBgn0030930.1.path1;Name=FBgn0030930.1;Dir=sensecoverage=100.0;identity=99.7;matches=1911;mismatches=6;indels=0;unknowns=0;locus=RLOC_00012092
Chr1	stalkie_big_nohaplotig	exon	144874190	144874293	100	-	.	Parent=FBgn0030930.1.mrna1;Target=FBgn0030930.1 1814 1917 +
Chr1	stalkie_big_nohaplotig	exon	144874499	144875590	99	-	.	Parent=FBgn0030930.1.mrna1;Target=FBgn0030930.1 722 1813 +
Chr1	stalkie_big_nohaplotig	exon	144875656	144876132	99	-	.	Parent=FBgn0030930.1.mrna1;Target=FBgn0030930.1 245 721 +
Chr1	stalkie_big_nohaplotig	exon	144878846	144879089	99	-	.	Parent=FBgn0030930.1.mrna1;Target=FBgn0030930.1 1 244 +
Chr1	stalkie_big_nohaplotig	CDS	144874190	144874293	.	-	2	Parent=FBgn0030930.1.mrna1;Target=FBgn0030930.1 1814 1917 +
Chr1	stalkie_big_nohaplotig	CDS	144874499	144875590	.	-	2	Parent=FBgn0030930.1.mrna1;Target=FBgn0030930.1 722 1813 +
Chr1	stalkie_big_nohaplotig	CDS	144875656	144876132	.	-	2	Parent=FBgn0030930.1.mrna1;Target=FBgn0030930.1 245 721 +
Chr1	stalkie_big_nohaplotig	CDS	144878846	144879089	.	-	0	Parent=FBgn0030930.1.mrna1;Target=FBgn0030930.1 1 244 +
Chr1	gffcl	locus	144882119	144885231	.	+	.	ID=RLOC_00012093;geneIDs=comp161616_c1_seq1.path1;transcripts=comp161616_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144882119	144885231	.	+	.	ID=comp161616_c1_seq1.mrna1;geneID=comp161616_c1_seq1.path1;Name=comp161616_c1_seq1;Dir=sensecoverage=99.8;identity=99.4;matches=2910;mismatches=17;indels=1;unknowns=0;locus=RLOC_00012093
Chr1	stalkie_big_nohaplotig	exon	144882119	144882770	99	+	.	Parent=comp161616_c1_seq1.mrna1;Target=comp161616_c1_seq1 6 657 +
Chr1	stalkie_big_nohaplotig	exon	144882838	144884038	99	+	.	Parent=comp161616_c1_seq1.mrna1;Target=comp161616_c1_seq1 658 1859 +
Chr1	stalkie_big_nohaplotig	exon	144884101	144884928	99	+	.	Parent=comp161616_c1_seq1.mrna1;Target=comp161616_c1_seq1 1860 2687 +
Chr1	stalkie_big_nohaplotig	exon	144884986	144885231	100	+	.	Parent=comp161616_c1_seq1.mrna1;Target=comp161616_c1_seq1 2688 2933 +
Chr1	stalkie_big_nohaplotig	CDS	144882426	144882770	.	+	0	Parent=comp161616_c1_seq1.mrna1;Target=comp161616_c1_seq1 313 657 +
Chr1	stalkie_big_nohaplotig	CDS	144882838	144883493	.	+	0	Parent=comp161616_c1_seq1.mrna1;Target=comp161616_c1_seq1 658 1314 +
Chr1	gffcl	locus	144885237	144886480	.	+	.	ID=RLOC_00012094;geneIDs=FBgn0025388.path1;transcripts=FBgn0025388.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144885237	144886480	.	+	.	ID=FBgn0025388.mrna1;geneID=FBgn0025388.path1;Name=FBgn0025388;Dir=sensecoverage=100.0;identity=100.0;matches=1104;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012094
Chr1	stalkie_big_nohaplotig	exon	144885237	144886131	100	+	.	Parent=FBgn0025388.mrna1;Target=FBgn0025388 1 895 +
Chr1	stalkie_big_nohaplotig	exon	144886197	144886345	100	+	.	Parent=FBgn0025388.mrna1;Target=FBgn0025388 896 1044 +
Chr1	stalkie_big_nohaplotig	exon	144886421	144886480	100	+	.	Parent=FBgn0025388.mrna1;Target=FBgn0025388 1045 1104 +
Chr1	stalkie_big_nohaplotig	CDS	144885237	144886131	.	+	0	Parent=FBgn0025388.mrna1;Target=FBgn0025388 1 895 +
Chr1	stalkie_big_nohaplotig	CDS	144886197	144886345	.	+	2	Parent=FBgn0025388.mrna1;Target=FBgn0025388 896 1044 +
Chr1	stalkie_big_nohaplotig	CDS	144886421	144886480	.	+	0	Parent=FBgn0025388.mrna1;Target=FBgn0025388 1045 1104 +
Chr1	gffcl	locus	144903187	144927888	.	.	.	ID=RLOC_00012097;geneIDs=FBgn0000117.1.path1,comp153313_c0_seq1.path1,comp718850_c0_seq1.path1;transcripts=FBgn0000117.1.mrna1,comp153313_c0_seq1.mrna1,comp718850_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144903187	144927888	.	-	.	ID=FBgn0000117.1.mrna1;geneID=FBgn0000117.1.path1;Name=FBgn0000117.1;Dir=sensecoverage=100.0;identity=100.0;matches=2475;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012097
Chr1	stalkie_big_nohaplotig	exon	144903187	144903410	100	-	.	Parent=FBgn0000117.1.mrna1;Target=FBgn0000117.1 2252 2475 +
Chr1	stalkie_big_nohaplotig	exon	144909501	144909594	100	-	.	Parent=FBgn0000117.1.mrna1;Target=FBgn0000117.1 2158 2251 +
Chr1	stalkie_big_nohaplotig	exon	144911893	144912165	100	-	.	Parent=FBgn0000117.1.mrna1;Target=FBgn0000117.1 1885 2157 +
Chr1	stalkie_big_nohaplotig	exon	144912224	144912424	100	-	.	Parent=FBgn0000117.1.mrna1;Target=FBgn0000117.1 1684 1884 +
Chr1	stalkie_big_nohaplotig	exon	144912500	144914139	100	-	.	Parent=FBgn0000117.1.mrna1;Target=FBgn0000117.1 44 1683 +
Chr1	stalkie_big_nohaplotig	exon	144927846	144927888	100	-	.	Parent=FBgn0000117.1.mrna1;Target=FBgn0000117.1 1 43 +
Chr1	stalkie_big_nohaplotig	CDS	144903187	144903410	.	-	2	Parent=FBgn0000117.1.mrna1;Target=FBgn0000117.1 2252 2475 +
Chr1	stalkie_big_nohaplotig	CDS	144909501	144909594	.	-	0	Parent=FBgn0000117.1.mrna1;Target=FBgn0000117.1 2158 2251 +
Chr1	stalkie_big_nohaplotig	CDS	144911893	144912165	.	-	0	Parent=FBgn0000117.1.mrna1;Target=FBgn0000117.1 1885 2157 +
Chr1	stalkie_big_nohaplotig	CDS	144912224	144912424	.	-	0	Parent=FBgn0000117.1.mrna1;Target=FBgn0000117.1 1684 1884 +
Chr1	stalkie_big_nohaplotig	CDS	144912500	144914139	.	-	2	Parent=FBgn0000117.1.mrna1;Target=FBgn0000117.1 44 1683 +
Chr1	stalkie_big_nohaplotig	CDS	144927846	144927888	.	-	0	Parent=FBgn0000117.1.mrna1;Target=FBgn0000117.1 1 43 +
Chr1	stalkie_big_nohaplotig	mRNA	144909040	144909523	.	+	.	ID=comp153313_c0_seq1.mrna1;geneID=comp153313_c0_seq1.path1;Name=comp153313_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=483;mismatches=1;indels=0;unknowns=0;Target=comp153313_c0_seq1 484 1 .;CDS_Target=comp153313_c0_seq1 264 193 .;locus=RLOC_00012097
Chr1	stalkie_big_nohaplotig	exon	144909040	144909523	99	+	.	Parent=comp153313_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144909232	144909303	.	+	0	Parent=comp153313_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144909551	144909797	.	-	.	ID=comp718850_c0_seq1.mrna1;geneID=comp718850_c0_seq1.path1;Name=comp718850_c0_seq1;Dir=indeterminatecoverage=93.2;identity=98.8;matches=244;mismatches=3;indels=0;unknowns=0;Target=comp718850_c0_seq1 265 19 .;CDS_Target=comp718850_c0_seq1 177 88 .;locus=RLOC_00012097
Chr1	stalkie_big_nohaplotig	exon	144909551	144909797	98	-	.	Parent=comp718850_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144909639	144909728	.	-	0	Parent=comp718850_c0_seq1.mrna1
Chr1	gffcl	locus	144905874	144906149	.	+	.	ID=RLOC_00012098;geneIDs=comp81417_c0_seq1.path1;transcripts=comp81417_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144905874	144906149	.	+	.	ID=comp81417_c0_seq1.mrna1;geneID=comp81417_c0_seq1.path1;Name=comp81417_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=276;mismatches=0;indels=0;unknowns=0;Target=comp81417_c0_seq1 276 1 .;CDS_Target=comp81417_c0_seq1 135 1 .;locus=RLOC_00012098
Chr1	stalkie_big_nohaplotig	exon	144905874	144906149	100	+	.	Parent=comp81417_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144905874	144906008	.	+	0	Parent=comp81417_c0_seq1.mrna1
Chr1	gffcl	locus	144933135	144954045	.	-	.	ID=RLOC_00012099;geneIDs=FBgn0064126.1.path1,comp148020_c0_seq1.path1;transcripts=comp148020_c0_seq1.mrna1,FBgn0064126.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144933135	144953099	.	-	.	ID=comp148020_c0_seq1.mrna1;geneID=comp148020_c0_seq1.path1;Name=comp148020_c0_seq1;Dir=sensecoverage=78.1;identity=99.5;matches=996;mismatches=2;indels=3;unknowns=0;locus=RLOC_00012099
Chr1	stalkie_big_nohaplotig	exon	144933135	144933641	99	-	.	Parent=comp148020_c0_seq1.mrna1;Target=comp148020_c0_seq1 783 1288 +
Chr1	stalkie_big_nohaplotig	exon	144933704	144933916	100	-	.	Parent=comp148020_c0_seq1.mrna1;Target=comp148020_c0_seq1 570 782 +
Chr1	stalkie_big_nohaplotig	exon	144933981	144934236	98	-	.	Parent=comp148020_c0_seq1.mrna1;Target=comp148020_c0_seq1 312 569 +
Chr1	stalkie_big_nohaplotig	exon	144936436	144936440	100	-	.	Parent=comp148020_c0_seq1.mrna1;Target=comp148020_c0_seq1 307 311 +
Chr1	stalkie_big_nohaplotig	exon	144940588	144940594	85	-	.	Parent=comp148020_c0_seq1.mrna1;Target=comp148020_c0_seq1 300 306 +
Chr1	stalkie_big_nohaplotig	exon	144946270	144946273	100	-	.	Parent=comp148020_c0_seq1.mrna1;Target=comp148020_c0_seq1 296 299 +
Chr1	stalkie_big_nohaplotig	exon	144953093	144953099	100	-	.	Parent=comp148020_c0_seq1.mrna1;Target=comp148020_c0_seq1 282 288 +
Chr1	stalkie_big_nohaplotig	CDS	144933397	144933641	.	-	2	Parent=comp148020_c0_seq1.mrna1;Target=comp148020_c0_seq1 783 1027 +
Chr1	stalkie_big_nohaplotig	CDS	144933704	144933916	.	-	2	Parent=comp148020_c0_seq1.mrna1;Target=comp148020_c0_seq1 570 782 +
Chr1	stalkie_big_nohaplotig	CDS	144933981	144934095	.	-	0	Parent=comp148020_c0_seq1.mrna1;Target=comp148020_c0_seq1 455 569 +
Chr1	stalkie_big_nohaplotig	mRNA	144951191	144954045	.	-	.	ID=FBgn0064126.1.mrna1;geneID=FBgn0064126.1.path1;Name=FBgn0064126.1;Dir=sensecoverage=100.0;identity=99.8;matches=1557;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012099
Chr1	stalkie_big_nohaplotig	exon	144951191	144951302	98	-	.	Parent=FBgn0064126.1.mrna1;Target=FBgn0064126.1 1449 1560 +
Chr1	stalkie_big_nohaplotig	exon	144952355	144952541	100	-	.	Parent=FBgn0064126.1.mrna1;Target=FBgn0064126.1 1262 1448 +
Chr1	stalkie_big_nohaplotig	exon	144952610	144952964	100	-	.	Parent=FBgn0064126.1.mrna1;Target=FBgn0064126.1 907 1261 +
Chr1	stalkie_big_nohaplotig	exon	144953025	144953376	100	-	.	Parent=FBgn0064126.1.mrna1;Target=FBgn0064126.1 555 906 +
Chr1	stalkie_big_nohaplotig	exon	144953432	144953850	100	-	.	Parent=FBgn0064126.1.mrna1;Target=FBgn0064126.1 136 554 +
Chr1	stalkie_big_nohaplotig	exon	144953911	144954045	99	-	.	Parent=FBgn0064126.1.mrna1;Target=FBgn0064126.1 1 135 +
Chr1	stalkie_big_nohaplotig	CDS	144951191	144951302	.	-	1	Parent=FBgn0064126.1.mrna1;Target=FBgn0064126.1 1449 1560 +
Chr1	stalkie_big_nohaplotig	CDS	144952355	144952541	.	-	2	Parent=FBgn0064126.1.mrna1;Target=FBgn0064126.1 1262 1448 +
Chr1	stalkie_big_nohaplotig	CDS	144952610	144952964	.	-	0	Parent=FBgn0064126.1.mrna1;Target=FBgn0064126.1 907 1261 +
Chr1	stalkie_big_nohaplotig	CDS	144953025	144953376	.	-	1	Parent=FBgn0064126.1.mrna1;Target=FBgn0064126.1 555 906 +
Chr1	stalkie_big_nohaplotig	CDS	144953432	144953850	.	-	0	Parent=FBgn0064126.1.mrna1;Target=FBgn0064126.1 136 554 +
Chr1	stalkie_big_nohaplotig	CDS	144953911	144954045	.	-	0	Parent=FBgn0064126.1.mrna1;Target=FBgn0064126.1 1 135 +
Chr1	gffcl	locus	144936287	144936778	.	+	.	ID=RLOC_00012100;geneIDs=FBgn0031992.1.path1;transcripts=FBgn0031992.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144936287	144936778	.	+	.	ID=FBgn0031992.1.mrna1;geneID=FBgn0031992.1.path1;Name=FBgn0031992.1;Dir=sensecoverage=100.0;identity=99.6;matches=278;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012100
Chr1	stalkie_big_nohaplotig	exon	144936287	144936310	100	+	.	Parent=FBgn0031992.1.mrna1;Target=FBgn0031992.1 1 24 +
Chr1	stalkie_big_nohaplotig	exon	144936462	144936576	100	+	.	Parent=FBgn0031992.1.mrna1;Target=FBgn0031992.1 25 139 +
Chr1	stalkie_big_nohaplotig	exon	144936639	144936778	99	+	.	Parent=FBgn0031992.1.mrna1;Target=FBgn0031992.1 140 279 +
Chr1	stalkie_big_nohaplotig	CDS	144936287	144936310	.	+	0	Parent=FBgn0031992.1.mrna1;Target=FBgn0031992.1 1 24 +
Chr1	stalkie_big_nohaplotig	CDS	144936462	144936576	.	+	0	Parent=FBgn0031992.1.mrna1;Target=FBgn0031992.1 25 139 +
Chr1	stalkie_big_nohaplotig	CDS	144936639	144936778	.	+	2	Parent=FBgn0031992.1.mrna1;Target=FBgn0031992.1 140 279 +
Chr1	gffcl	locus	144937134	144938858	.	-	.	ID=RLOC_00012101;geneIDs=FBgn0261064.1.path1;transcripts=FBgn0261064.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144937134	144938858	.	-	.	ID=FBgn0261064.1.mrna1;geneID=FBgn0261064.1.path1;Name=FBgn0261064.1;Dir=sensecoverage=100.0;identity=99.8;matches=1530;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012101
Chr1	stalkie_big_nohaplotig	exon	144937134	144937382	100	-	.	Parent=FBgn0261064.1.mrna1;Target=FBgn0261064.1 1285 1533 +
Chr1	stalkie_big_nohaplotig	exon	144937444	144938066	99	-	.	Parent=FBgn0261064.1.mrna1;Target=FBgn0261064.1 662 1284 +
Chr1	stalkie_big_nohaplotig	exon	144938143	144938290	100	-	.	Parent=FBgn0261064.1.mrna1;Target=FBgn0261064.1 514 661 +
Chr1	stalkie_big_nohaplotig	exon	144938346	144938858	99	-	.	Parent=FBgn0261064.1.mrna1;Target=FBgn0261064.1 1 513 +
Chr1	stalkie_big_nohaplotig	CDS	144937134	144937382	.	-	0	Parent=FBgn0261064.1.mrna1;Target=FBgn0261064.1 1285 1533 +
Chr1	stalkie_big_nohaplotig	CDS	144937444	144938066	.	-	2	Parent=FBgn0261064.1.mrna1;Target=FBgn0261064.1 662 1284 +
Chr1	stalkie_big_nohaplotig	CDS	144938143	144938290	.	-	0	Parent=FBgn0261064.1.mrna1;Target=FBgn0261064.1 514 661 +
Chr1	stalkie_big_nohaplotig	CDS	144938346	144938858	.	-	0	Parent=FBgn0261064.1.mrna1;Target=FBgn0261064.1 1 513 +
Chr1	gffcl	locus	144955373	144956958	.	+	.	ID=RLOC_00012103;geneIDs=FBgn0086768.1.path1;transcripts=FBgn0086768.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144955373	144956958	.	+	.	ID=FBgn0086768.1.mrna1;geneID=FBgn0086768.1.path1;Name=FBgn0086768.1;Dir=sensecoverage=100.0;identity=99.8;matches=850;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012103
Chr1	stalkie_big_nohaplotig	exon	144955373	144955406	100	+	.	Parent=FBgn0086768.1.mrna1;Target=FBgn0086768.1 1 34 +
Chr1	stalkie_big_nohaplotig	exon	144955515	144955706	100	+	.	Parent=FBgn0086768.1.mrna1;Target=FBgn0086768.1 35 226 +
Chr1	stalkie_big_nohaplotig	exon	144956099	144956235	100	+	.	Parent=FBgn0086768.1.mrna1;Target=FBgn0086768.1 227 363 +
Chr1	stalkie_big_nohaplotig	exon	144956296	144956536	99	+	.	Parent=FBgn0086768.1.mrna1;Target=FBgn0086768.1 364 604 +
Chr1	stalkie_big_nohaplotig	exon	144956598	144956712	100	+	.	Parent=FBgn0086768.1.mrna1;Target=FBgn0086768.1 605 719 +
Chr1	stalkie_big_nohaplotig	exon	144956769	144956817	100	+	.	Parent=FBgn0086768.1.mrna1;Target=FBgn0086768.1 720 768 +
Chr1	stalkie_big_nohaplotig	exon	144956875	144956958	100	+	.	Parent=FBgn0086768.1.mrna1;Target=FBgn0086768.1 769 852 +
Chr1	stalkie_big_nohaplotig	CDS	144955373	144955406	.	+	0	Parent=FBgn0086768.1.mrna1;Target=FBgn0086768.1 1 34 +
Chr1	stalkie_big_nohaplotig	CDS	144955515	144955706	.	+	2	Parent=FBgn0086768.1.mrna1;Target=FBgn0086768.1 35 226 +
Chr1	stalkie_big_nohaplotig	CDS	144956099	144956235	.	+	2	Parent=FBgn0086768.1.mrna1;Target=FBgn0086768.1 227 363 +
Chr1	stalkie_big_nohaplotig	CDS	144956296	144956536	.	+	0	Parent=FBgn0086768.1.mrna1;Target=FBgn0086768.1 364 604 +
Chr1	stalkie_big_nohaplotig	CDS	144956598	144956712	.	+	2	Parent=FBgn0086768.1.mrna1;Target=FBgn0086768.1 605 719 +
Chr1	stalkie_big_nohaplotig	CDS	144956769	144956817	.	+	1	Parent=FBgn0086768.1.mrna1;Target=FBgn0086768.1 720 768 +
Chr1	stalkie_big_nohaplotig	CDS	144956875	144956958	.	+	0	Parent=FBgn0086768.1.mrna1;Target=FBgn0086768.1 769 852 +
Chr1	gffcl	locus	144958263	144961516	.	+	.	ID=RLOC_00012104;geneIDs=FBgn0025394.1.path1;transcripts=FBgn0025394.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144958263	144961516	.	+	.	ID=FBgn0025394.1.mrna1;geneID=FBgn0025394.1.path1;Name=FBgn0025394.1;Dir=sensecoverage=98.7;identity=100.0;matches=743;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012104
Chr1	stalkie_big_nohaplotig	exon	144958263	144958562	100	+	.	Parent=FBgn0025394.1.mrna1;Target=FBgn0025394.1 1 300 +
Chr1	stalkie_big_nohaplotig	exon	144959255	144959440	100	+	.	Parent=FBgn0025394.1.mrna1;Target=FBgn0025394.1 301 486 +
Chr1	stalkie_big_nohaplotig	exon	144959513	144959578	100	+	.	Parent=FBgn0025394.1.mrna1;Target=FBgn0025394.1 487 552 +
Chr1	stalkie_big_nohaplotig	exon	144961326	144961516	100	+	.	Parent=FBgn0025394.1.mrna1;Target=FBgn0025394.1 553 743 +
Chr1	stalkie_big_nohaplotig	CDS	144958263	144958562	.	+	0	Parent=FBgn0025394.1.mrna1;Target=FBgn0025394.1 1 300 +
Chr1	stalkie_big_nohaplotig	CDS	144959255	144959440	.	+	0	Parent=FBgn0025394.1.mrna1;Target=FBgn0025394.1 301 486 +
Chr1	stalkie_big_nohaplotig	CDS	144959513	144959578	.	+	0	Parent=FBgn0025394.1.mrna1;Target=FBgn0025394.1 487 552 +
Chr1	stalkie_big_nohaplotig	CDS	144961326	144961514	.	+	0	Parent=FBgn0025394.1.mrna1;Target=FBgn0025394.1 553 741 +
Chr1	gffcl	locus	144962862	144963640	.	-	.	ID=RLOC_00012105;geneIDs=comp158861_c0_seq1.path1;transcripts=comp158861_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144962862	144963640	.	-	.	ID=comp158861_c0_seq1.mrna1;geneID=comp158861_c0_seq1.path1;Name=comp158861_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=764;mismatches=15;indels=8;unknowns=0;Target=comp158861_c0_seq1 787 1 .;CDS_Target=comp158861_c0_seq1 219 163 .;locus=RLOC_00012105
Chr1	stalkie_big_nohaplotig	exon	144962862	144963640	97	-	.	Parent=comp158861_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144963429	144963478	.	-	0	Parent=comp158861_c0_seq1.mrna1
Chr1	gffcl	locus	144965154	144965613	.	+	.	ID=RLOC_00012106;geneIDs=comp118509_c0_seq1.path1;transcripts=comp118509_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144965154	144965613	.	+	.	ID=comp118509_c0_seq1.mrna1;geneID=comp118509_c0_seq1.path1;Name=comp118509_c0_seq1;Dir=indeterminatecoverage=95.5;identity=96.3;matches=443;mismatches=2;indels=15;unknowns=0;Target=comp118509_c0_seq1 458 14 .;CDS_Target=comp118509_c0_seq1 152 72 .;locus=RLOC_00012106
Chr1	stalkie_big_nohaplotig	exon	144965154	144965613	96	+	.	Parent=comp118509_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144965212	144965292	.	+	0	Parent=comp118509_c0_seq1.mrna1
Chr1	gffcl	locus	144969712	144973073	.	+	.	ID=RLOC_00012107;geneIDs=FBgn0027093.1.path1;transcripts=FBgn0027093.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144969712	144973073	.	+	.	ID=FBgn0027093.1.mrna1;geneID=FBgn0027093.1.path1;Name=FBgn0027093.1;Dir=sensecoverage=100.0;identity=99.7;matches=2048;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012107
Chr1	stalkie_big_nohaplotig	exon	144969712	144969762	100	+	.	Parent=FBgn0027093.1.mrna1;Target=FBgn0027093.1 1 51 +
Chr1	stalkie_big_nohaplotig	exon	144969815	144969952	100	+	.	Parent=FBgn0027093.1.mrna1;Target=FBgn0027093.1 52 189 +
Chr1	stalkie_big_nohaplotig	exon	144970009	144970397	99	+	.	Parent=FBgn0027093.1.mrna1;Target=FBgn0027093.1 190 578 +
Chr1	stalkie_big_nohaplotig	exon	144970458	144970787	99	+	.	Parent=FBgn0027093.1.mrna1;Target=FBgn0027093.1 579 908 +
Chr1	stalkie_big_nohaplotig	exon	144971927	144973073	99	+	.	Parent=FBgn0027093.1.mrna1;Target=FBgn0027093.1 909 2055 +
Chr1	stalkie_big_nohaplotig	CDS	144969712	144969762	.	+	0	Parent=FBgn0027093.1.mrna1;Target=FBgn0027093.1 1 51 +
Chr1	stalkie_big_nohaplotig	CDS	144969815	144969952	.	+	0	Parent=FBgn0027093.1.mrna1;Target=FBgn0027093.1 52 189 +
Chr1	stalkie_big_nohaplotig	CDS	144970009	144970397	.	+	0	Parent=FBgn0027093.1.mrna1;Target=FBgn0027093.1 190 578 +
Chr1	stalkie_big_nohaplotig	CDS	144970458	144970787	.	+	1	Parent=FBgn0027093.1.mrna1;Target=FBgn0027093.1 579 908 +
Chr1	stalkie_big_nohaplotig	CDS	144971927	144973073	.	+	1	Parent=FBgn0027093.1.mrna1;Target=FBgn0027093.1 909 2055 +
Chr1	gffcl	locus	144973602	144975835	.	+	.	ID=RLOC_00012108;geneIDs=FBgn0260755.1.path1;transcripts=FBgn0260755.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144973602	144975835	.	+	.	ID=FBgn0260755.1.mrna1;geneID=FBgn0260755.1.path1;Name=FBgn0260755.1;Dir=sensecoverage=100.0;identity=99.5;matches=1188;mismatches=6;indels=0;unknowns=0;locus=RLOC_00012108
Chr1	stalkie_big_nohaplotig	exon	144973602	144973826	99	+	.	Parent=FBgn0260755.1.mrna1;Target=FBgn0260755.1 1 225 +
Chr1	stalkie_big_nohaplotig	exon	144973888	144974077	99	+	.	Parent=FBgn0260755.1.mrna1;Target=FBgn0260755.1 226 415 +
Chr1	stalkie_big_nohaplotig	exon	144974133	144974269	99	+	.	Parent=FBgn0260755.1.mrna1;Target=FBgn0260755.1 416 552 +
Chr1	stalkie_big_nohaplotig	exon	144975075	144975366	99	+	.	Parent=FBgn0260755.1.mrna1;Target=FBgn0260755.1 553 844 +
Chr1	stalkie_big_nohaplotig	exon	144975429	144975700	100	+	.	Parent=FBgn0260755.1.mrna1;Target=FBgn0260755.1 845 1116 +
Chr1	stalkie_big_nohaplotig	exon	144975758	144975835	100	+	.	Parent=FBgn0260755.1.mrna1;Target=FBgn0260755.1 1117 1194 +
Chr1	stalkie_big_nohaplotig	CDS	144973602	144973826	.	+	0	Parent=FBgn0260755.1.mrna1;Target=FBgn0260755.1 1 225 +
Chr1	stalkie_big_nohaplotig	CDS	144973888	144974077	.	+	0	Parent=FBgn0260755.1.mrna1;Target=FBgn0260755.1 226 415 +
Chr1	stalkie_big_nohaplotig	CDS	144974133	144974269	.	+	2	Parent=FBgn0260755.1.mrna1;Target=FBgn0260755.1 416 552 +
Chr1	stalkie_big_nohaplotig	CDS	144975075	144975366	.	+	0	Parent=FBgn0260755.1.mrna1;Target=FBgn0260755.1 553 844 +
Chr1	stalkie_big_nohaplotig	CDS	144975429	144975700	.	+	2	Parent=FBgn0260755.1.mrna1;Target=FBgn0260755.1 845 1116 +
Chr1	stalkie_big_nohaplotig	CDS	144975758	144975835	.	+	0	Parent=FBgn0260755.1.mrna1;Target=FBgn0260755.1 1117 1194 +
Chr1	gffcl	locus	144979596	144980583	.	-	.	ID=RLOC_00012109;geneIDs=comp150583_c0_seq1.path1;transcripts=comp150583_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144979596	144980583	.	-	.	ID=comp150583_c0_seq1.mrna1;geneID=comp150583_c0_seq1.path1;Name=comp150583_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=984;mismatches=4;indels=7;unknowns=0;Target=comp150583_c0_seq1 995 1 .;CDS_Target=comp150583_c0_seq1 145 2 .;locus=RLOC_00012109
Chr1	stalkie_big_nohaplotig	exon	144979596	144980583	98	-	.	Parent=comp150583_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144980439	144980582	.	-	0	Parent=comp150583_c0_seq1.mrna1
Chr1	gffcl	locus	144980769	144981013	.	+	.	ID=RLOC_00012110;geneIDs=comp104783_c0_seq1.path1;transcripts=comp104783_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144980769	144981013	.	+	.	ID=comp104783_c0_seq1.mrna1;geneID=comp104783_c0_seq1.path1;Name=comp104783_c0_seq1;Dir=indeterminatecoverage=86.6;identity=99.6;matches=244;mismatches=1;indels=0;unknowns=0;Target=comp104783_c0_seq1 268 24 .;CDS_Target=comp104783_c0_seq1 62 24 .;locus=RLOC_00012110
Chr1	stalkie_big_nohaplotig	exon	144980769	144981013	99	+	.	Parent=comp104783_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144980769	144980807	.	+	0	Parent=comp104783_c0_seq1.mrna1
Chr1	gffcl	locus	144981127	144981443	.	-	.	ID=RLOC_00012111;geneIDs=comp118194_c0_seq1.path1;transcripts=comp118194_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144981127	144981443	.	-	.	ID=comp118194_c0_seq1.mrna1;geneID=comp118194_c0_seq1.path1;Name=comp118194_c0_seq1;Dir=indeterminatecoverage=83.4;identity=99.7;matches=316;mismatches=1;indels=0;unknowns=0;Target=comp118194_c0_seq1 380 64 .;CDS_Target=comp118194_c0_seq1 258 208 .;locus=RLOC_00012111
Chr1	stalkie_big_nohaplotig	exon	144981127	144981443	99	-	.	Parent=comp118194_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	144981249	144981299	.	-	0	Parent=comp118194_c0_seq1.mrna1
Chr1	gffcl	locus	144982208	145083579	.	-	.	ID=RLOC_00012112;geneIDs=FBgn0026076.1.path1;transcripts=FBgn0026076.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	144982208	145083579	.	-	.	ID=FBgn0026076.1.mrna1;geneID=FBgn0026076.1.path1;Name=FBgn0026076.1;Dir=sensecoverage=100.0;identity=99.4;matches=1071;mismatches=0;indels=6;unknowns=0;locus=RLOC_00012112
Chr1	stalkie_big_nohaplotig	exon	144982208	144982269	100	-	.	Parent=FBgn0026076.1.mrna1;Target=FBgn0026076.1 1016 1077 +
Chr1	stalkie_big_nohaplotig	exon	144982338	144982502	100	-	.	Parent=FBgn0026076.1.mrna1;Target=FBgn0026076.1 851 1015 +
Chr1	stalkie_big_nohaplotig	exon	144997517	144997625	100	-	.	Parent=FBgn0026076.1.mrna1;Target=FBgn0026076.1 742 850 +
Chr1	stalkie_big_nohaplotig	exon	145082845	145083579	99	-	.	Parent=FBgn0026076.1.mrna1;Target=FBgn0026076.1 1 741 +
Chr1	stalkie_big_nohaplotig	CDS	144982208	144982269	.	-	2	Parent=FBgn0026076.1.mrna1;Target=FBgn0026076.1 1016 1077 +
Chr1	stalkie_big_nohaplotig	CDS	144982338	144982502	.	-	2	Parent=FBgn0026076.1.mrna1;Target=FBgn0026076.1 851 1015 +
Chr1	stalkie_big_nohaplotig	CDS	144997517	144997625	.	-	0	Parent=FBgn0026076.1.mrna1;Target=FBgn0026076.1 742 850 +
Chr1	stalkie_big_nohaplotig	CDS	145082845	145083579	.	-	0	Parent=FBgn0026076.1.mrna1;Target=FBgn0026076.1 1 741 +
Chr1	gffcl	locus	145094980	145096567	.	+	.	ID=RLOC_00012114;geneIDs=comp162380_c0_seq1.path1;transcripts=comp162380_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145094980	145096567	.	+	.	ID=comp162380_c0_seq1.mrna1;geneID=comp162380_c0_seq1.path1;Name=comp162380_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.3;matches=1496;mismatches=85;indels=75;unknowns=0;Target=comp162380_c0_seq1 1649 1 .;CDS_Target=comp162380_c0_seq1 1279 1112 .;locus=RLOC_00012114
Chr1	stalkie_big_nohaplotig	exon	145094980	145096567	90	+	.	Parent=comp162380_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145096072	145096230	.	+	0	Parent=comp162380_c0_seq1.mrna1
Chr1	gffcl	locus	145098044	145098684	.	-	.	ID=RLOC_00012115;geneIDs=comp156892_c0_seq1.path1;transcripts=comp156892_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145098044	145098684	.	-	.	ID=comp156892_c0_seq1.mrna1;geneID=comp156892_c0_seq1.path1;Name=comp156892_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.6;matches=618;mismatches=21;indels=21;unknowns=0;Target=comp156892_c0_seq1 658 1 .;CDS_Target=comp156892_c0_seq1 481 425 .;locus=RLOC_00012115
Chr1	stalkie_big_nohaplotig	exon	145098044	145098684	93	-	.	Parent=comp156892_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145098202	145098258	.	-	0	Parent=comp156892_c0_seq1.mrna1
Chr1	gffcl	locus	145109616	145123737	.	-	.	ID=RLOC_00012116;geneIDs=FBgn0026374.1.path2;transcripts=FBgn0026374.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	145109616	145123737	.	-	.	ID=FBgn0026374.1.mrna2;geneID=FBgn0026374.1.path2;Name=FBgn0026374.1;Dir=sensecoverage=94.9;identity=99.7;matches=2061;mismatches=6;indels=0;unknowns=0;locus=RLOC_00012116
Chr1	stalkie_big_nohaplotig	exon	145109616	145109816	100	-	.	Parent=FBgn0026374.1.mrna2;Target=FBgn0026374.1 1978 2178 +
Chr1	stalkie_big_nohaplotig	exon	145109879	145110031	98	-	.	Parent=FBgn0026374.1.mrna2;Target=FBgn0026374.1 1825 1977 +
Chr1	stalkie_big_nohaplotig	exon	145110153	145110469	99	-	.	Parent=FBgn0026374.1.mrna2;Target=FBgn0026374.1 1508 1824 +
Chr1	stalkie_big_nohaplotig	exon	145110540	145110672	100	-	.	Parent=FBgn0026374.1.mrna2;Target=FBgn0026374.1 1375 1507 +
Chr1	stalkie_big_nohaplotig	exon	145111366	145111625	99	-	.	Parent=FBgn0026374.1.mrna2;Target=FBgn0026374.1 1115 1374 +
Chr1	stalkie_big_nohaplotig	exon	145111829	145111973	99	-	.	Parent=FBgn0026374.1.mrna2;Target=FBgn0026374.1 970 1114 +
Chr1	stalkie_big_nohaplotig	exon	145112115	145112431	100	-	.	Parent=FBgn0026374.1.mrna2;Target=FBgn0026374.1 653 969 +
Chr1	stalkie_big_nohaplotig	exon	145112500	145112641	99	-	.	Parent=FBgn0026374.1.mrna2;Target=FBgn0026374.1 511 652 +
Chr1	stalkie_big_nohaplotig	exon	145113577	145113730	100	-	.	Parent=FBgn0026374.1.mrna2;Target=FBgn0026374.1 357 510 +
Chr1	stalkie_big_nohaplotig	exon	145123427	145123554	100	-	.	Parent=FBgn0026374.1.mrna2;Target=FBgn0026374.1 229 356 +
Chr1	stalkie_big_nohaplotig	exon	145123621	145123737	100	-	.	Parent=FBgn0026374.1.mrna2;Target=FBgn0026374.1 112 228 +
Chr1	stalkie_big_nohaplotig	CDS	145109616	145109816	.	-	0	Parent=FBgn0026374.1.mrna2;Target=FBgn0026374.1 1978 2178 +
Chr1	stalkie_big_nohaplotig	CDS	145109879	145110031	.	-	0	Parent=FBgn0026374.1.mrna2;Target=FBgn0026374.1 1825 1977 +
Chr1	stalkie_big_nohaplotig	CDS	145110153	145110469	.	-	2	Parent=FBgn0026374.1.mrna2;Target=FBgn0026374.1 1508 1824 +
Chr1	stalkie_big_nohaplotig	CDS	145110540	145110672	.	-	0	Parent=FBgn0026374.1.mrna2;Target=FBgn0026374.1 1375 1507 +
Chr1	stalkie_big_nohaplotig	CDS	145111366	145111625	.	-	2	Parent=FBgn0026374.1.mrna2;Target=FBgn0026374.1 1115 1374 +
Chr1	stalkie_big_nohaplotig	CDS	145111829	145111973	.	-	0	Parent=FBgn0026374.1.mrna2;Target=FBgn0026374.1 970 1114 +
Chr1	stalkie_big_nohaplotig	CDS	145112115	145112431	.	-	2	Parent=FBgn0026374.1.mrna2;Target=FBgn0026374.1 653 969 +
Chr1	stalkie_big_nohaplotig	CDS	145112500	145112641	.	-	0	Parent=FBgn0026374.1.mrna2;Target=FBgn0026374.1 511 652 +
Chr1	stalkie_big_nohaplotig	CDS	145113577	145113730	.	-	1	Parent=FBgn0026374.1.mrna2;Target=FBgn0026374.1 357 510 +
Chr1	stalkie_big_nohaplotig	CDS	145123427	145123554	.	-	0	Parent=FBgn0026374.1.mrna2;Target=FBgn0026374.1 229 356 +
Chr1	stalkie_big_nohaplotig	CDS	145123621	145123737	.	-	0	Parent=FBgn0026374.1.mrna2;Target=FBgn0026374.1 112 228 +
Chr1	gffcl	locus	145163375	145164682	.	+	.	ID=RLOC_00012117;geneIDs=FBgn0011293.1.path1,comp150341_c0_seq1.path1;transcripts=comp150341_c0_seq1.mrna1,FBgn0011293.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145163375	145164682	.	+	.	ID=comp150341_c0_seq1.mrna1;geneID=comp150341_c0_seq1.path1;Name=comp150341_c0_seq1;Dir=sensecoverage=98.9;identity=97.7;matches=1177;mismatches=21;indels=7;unknowns=0;locus=RLOC_00012117
Chr1	stalkie_big_nohaplotig	exon	145163375	145163670	99	+	.	Parent=comp150341_c0_seq1.mrna1;Target=comp150341_c0_seq1 1 296 +
Chr1	stalkie_big_nohaplotig	exon	145163779	145164682	97	+	.	Parent=comp150341_c0_seq1.mrna1;Target=comp150341_c0_seq1 297 1203 +
Chr1	stalkie_big_nohaplotig	CDS	145163430	145163670	.	+	0	Parent=comp150341_c0_seq1.mrna1;Target=comp150341_c0_seq1 56 296 +
Chr1	stalkie_big_nohaplotig	CDS	145163779	145164023	.	+	2	Parent=comp150341_c0_seq1.mrna1;Target=comp150341_c0_seq1 297 541 +
Chr1	stalkie_big_nohaplotig	mRNA	145163418	145164027	.	+	.	ID=FBgn0011293.1.mrna1;geneID=FBgn0011293.1.path1;Name=FBgn0011293.1;Dir=sensecoverage=100.0;identity=99.4;matches=483;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012117
Chr1	stalkie_big_nohaplotig	exon	145163418	145163670	99	+	.	Parent=FBgn0011293.1.mrna1;Target=FBgn0011293.1 1 253 +
Chr1	stalkie_big_nohaplotig	exon	145163795	145164027	99	+	.	Parent=FBgn0011293.1.mrna1;Target=FBgn0011293.1 254 486 +
Chr1	stalkie_big_nohaplotig	CDS	145163418	145163670	.	+	0	Parent=FBgn0011293.1.mrna1;Target=FBgn0011293.1 1 253 +
Chr1	stalkie_big_nohaplotig	CDS	145163795	145164027	.	+	2	Parent=FBgn0011293.1.mrna1;Target=FBgn0011293.1 254 486 +
Chr1	gffcl	locus	145185170	147078520	.	-	.	ID=RLOC_00012118;geneIDs=comp134929_c0_seq1.path1;transcripts=comp134929_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145185170	147078520	.	-	.	ID=comp134929_c0_seq1.mrna1;geneID=comp134929_c0_seq1.path1;Name=comp134929_c0_seq1;Dir=sensecoverage=81.8;identity=99.1;matches=330;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012118
Chr1	stalkie_big_nohaplotig	exon	145185170	145185177	100	-	.	Parent=comp134929_c0_seq1.mrna1;Target=comp134929_c0_seq1 350 357 +
Chr1	stalkie_big_nohaplotig	exon	145198704	145198706	100	-	.	Parent=comp134929_c0_seq1.mrna1;Target=comp134929_c0_seq1 347 349 +
Chr1	stalkie_big_nohaplotig	exon	145205509	145205510	100	-	.	Parent=comp134929_c0_seq1.mrna1;Target=comp134929_c0_seq1 345 346 +
Chr1	stalkie_big_nohaplotig	exon	147078093	147078364	98	-	.	Parent=comp134929_c0_seq1.mrna1;Target=comp134929_c0_seq1 73 344 +
Chr1	stalkie_big_nohaplotig	exon	147078473	147078520	100	-	.	Parent=comp134929_c0_seq1.mrna1;Target=comp134929_c0_seq1 25 72 +
Chr1	stalkie_big_nohaplotig	CDS	147078170	147078364	.	-	0	Parent=comp134929_c0_seq1.mrna1;Target=comp134929_c0_seq1 73 267 +
Chr1	stalkie_big_nohaplotig	CDS	147078473	147078520	.	-	0	Parent=comp134929_c0_seq1.mrna1;Target=comp134929_c0_seq1 25 72 +
Chr1	gffcl	locus	145215988	145216903	.	-	.	ID=RLOC_00012119;geneIDs=comp156516_c0_seq1.path1;transcripts=comp156516_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145215988	145216903	.	-	.	ID=comp156516_c0_seq1.mrna1;geneID=comp156516_c0_seq1.path1;Name=comp156516_c0_seq1;Dir=antisensecoverage=99.9;identity=96.7;matches=846;mismatches=5;indels=24;unknowns=0;locus=RLOC_00012119
Chr1	stalkie_big_nohaplotig	exon	145215988	145216124	97	-	.	Parent=comp156516_c0_seq1.mrna1;Target=comp156516_c0_seq1 1 137 -
Chr1	stalkie_big_nohaplotig	exon	145216190	145216903	96	-	.	Parent=comp156516_c0_seq1.mrna1;Target=comp156516_c0_seq1 138 875 -
Chr1	stalkie_big_nohaplotig	CDS	145216105	145216124	.	-	2	Parent=comp156516_c0_seq1.mrna1;Target=comp156516_c0_seq1 118 137 .
Chr1	stalkie_big_nohaplotig	CDS	145216190	145216778	.	-	0	Parent=comp156516_c0_seq1.mrna1;Target=comp156516_c0_seq1 138 750 .
Chr1	gffcl	locus	145221241	145222005	.	+	.	ID=RLOC_00012120;geneIDs=ORF3133.path1;transcripts=ORF3133.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145221241	145222005	.	+	.	ID=ORF3133.mrna1;geneID=ORF3133.path1;Name=ORF3133;Dir=indeterminatecoverage=100.0;identity=98.8;matches=756;mismatches=9;indels=0;unknowns=0;Target=ORF3133 765 1 .;locus=RLOC_00012120
Chr1	stalkie_big_nohaplotig	exon	145221241	145222005	98	+	.	Parent=ORF3133.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145221241	145222005	.	+	0	Parent=ORF3133.mrna1
Chr1	gffcl	locus	145257443	145257783	.	+	.	ID=RLOC_00012121;geneIDs=comp115154_c0_seq1.path1;transcripts=comp115154_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145257443	145257783	.	+	.	ID=comp115154_c0_seq1.mrna1;geneID=comp115154_c0_seq1.path1;Name=comp115154_c0_seq1;Dir=indeterminatecoverage=98.8;identity=97.7;matches=333;mismatches=4;indels=4;unknowns=0;Target=comp115154_c0_seq1 337 1 .;CDS_Target=comp115154_c0_seq1 141 1 .;locus=RLOC_00012121
Chr1	stalkie_big_nohaplotig	exon	145257443	145257783	97	+	.	Parent=comp115154_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145257443	145257583	.	+	0	Parent=comp115154_c0_seq1.mrna1
Chr1	gffcl	locus	145257823	145311400	.	+	.	ID=RLOC_00012122;geneIDs=FBgn0052549.1.path1;transcripts=FBgn0052549.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145257823	145311400	.	+	.	ID=FBgn0052549.1.mrna1;geneID=FBgn0052549.1.path1;Name=FBgn0052549.1;Dir=sensecoverage=100.0;identity=99.5;matches=2036;mismatches=10;indels=0;unknowns=0;locus=RLOC_00012122
Chr1	stalkie_big_nohaplotig	exon	145257823	145258187	100	+	.	Parent=FBgn0052549.1.mrna1;Target=FBgn0052549.1 1 365 +
Chr1	stalkie_big_nohaplotig	exon	145298259	145298332	98	+	.	Parent=FBgn0052549.1.mrna1;Target=FBgn0052549.1 366 439 +
Chr1	stalkie_big_nohaplotig	exon	145301223	145301436	100	+	.	Parent=FBgn0052549.1.mrna1;Target=FBgn0052549.1 440 653 +
Chr1	stalkie_big_nohaplotig	exon	145301503	145301649	100	+	.	Parent=FBgn0052549.1.mrna1;Target=FBgn0052549.1 654 800 +
Chr1	stalkie_big_nohaplotig	exon	145309954	145310074	97	+	.	Parent=FBgn0052549.1.mrna1;Target=FBgn0052549.1 801 921 +
Chr1	stalkie_big_nohaplotig	exon	145310141	145310452	99	+	.	Parent=FBgn0052549.1.mrna1;Target=FBgn0052549.1 922 1233 +
Chr1	stalkie_big_nohaplotig	exon	145310512	145310753	100	+	.	Parent=FBgn0052549.1.mrna1;Target=FBgn0052549.1 1234 1475 +
Chr1	stalkie_big_nohaplotig	exon	145310830	145311400	99	+	.	Parent=FBgn0052549.1.mrna1;Target=FBgn0052549.1 1476 2046 +
Chr1	stalkie_big_nohaplotig	CDS	145257823	145258187	.	+	0	Parent=FBgn0052549.1.mrna1;Target=FBgn0052549.1 1 365 +
Chr1	stalkie_big_nohaplotig	CDS	145298259	145298332	.	+	1	Parent=FBgn0052549.1.mrna1;Target=FBgn0052549.1 366 439 +
Chr1	stalkie_big_nohaplotig	CDS	145301223	145301436	.	+	2	Parent=FBgn0052549.1.mrna1;Target=FBgn0052549.1 440 653 +
Chr1	stalkie_big_nohaplotig	CDS	145301503	145301649	.	+	1	Parent=FBgn0052549.1.mrna1;Target=FBgn0052549.1 654 800 +
Chr1	stalkie_big_nohaplotig	CDS	145309954	145310074	.	+	1	Parent=FBgn0052549.1.mrna1;Target=FBgn0052549.1 801 921 +
Chr1	stalkie_big_nohaplotig	CDS	145310141	145310452	.	+	0	Parent=FBgn0052549.1.mrna1;Target=FBgn0052549.1 922 1233 +
Chr1	stalkie_big_nohaplotig	CDS	145310512	145310753	.	+	0	Parent=FBgn0052549.1.mrna1;Target=FBgn0052549.1 1234 1475 +
Chr1	stalkie_big_nohaplotig	CDS	145310830	145311400	.	+	1	Parent=FBgn0052549.1.mrna1;Target=FBgn0052549.1 1476 2046 +
Chr1	gffcl	locus	145311765	145312073	.	+	.	ID=RLOC_00012123;geneIDs=comp142082_c0_seq1.path1;transcripts=comp142082_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145311765	145312073	.	+	.	ID=comp142082_c0_seq1.mrna1;geneID=comp142082_c0_seq1.path1;Name=comp142082_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=306;mismatches=3;indels=3;unknowns=0;Target=comp142082_c0_seq1 312 1 .;CDS_Target=comp142082_c0_seq1 182 69 .;locus=RLOC_00012123
Chr1	stalkie_big_nohaplotig	exon	145311765	145312073	98	+	.	Parent=comp142082_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145311833	145311943	.	+	0	Parent=comp142082_c0_seq1.mrna1
Chr1	gffcl	locus	145312582	145313663	.	-	.	ID=RLOC_00012124;geneIDs=comp163227_c0_seq1.path1;transcripts=comp163227_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145312582	145313663	.	-	.	ID=comp163227_c0_seq1.mrna1;geneID=comp163227_c0_seq1.path1;Name=comp163227_c0_seq1;Dir=indeterminatecoverage=99.2;identity=95.7;matches=1036;mismatches=41;indels=5;unknowns=0;Target=comp163227_c0_seq1 1077 1 .;CDS_Target=comp163227_c0_seq1 86 3 .;locus=RLOC_00012124
Chr1	stalkie_big_nohaplotig	exon	145312582	145313663	95	-	.	Parent=comp163227_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145313578	145313661	.	-	0	Parent=comp163227_c0_seq1.mrna1
Chr1	gffcl	locus	145315671	145316865	.	-	.	ID=RLOC_00012125;geneIDs=comp153426_c0_seq1.path1;transcripts=comp153426_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145315671	145316865	.	-	.	ID=comp153426_c0_seq1.mrna1;geneID=comp153426_c0_seq1.path1;Name=comp153426_c0_seq1;Dir=antisensecoverage=99.7;identity=99.7;matches=659;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012125
Chr1	stalkie_big_nohaplotig	exon	145315671	145315867	99	-	.	Parent=comp153426_c0_seq1.mrna1;Target=comp153426_c0_seq1 3 199 -
Chr1	stalkie_big_nohaplotig	exon	145315933	145316006	100	-	.	Parent=comp153426_c0_seq1.mrna1;Target=comp153426_c0_seq1 200 273 -
Chr1	stalkie_big_nohaplotig	exon	145316092	145316287	99	-	.	Parent=comp153426_c0_seq1.mrna1;Target=comp153426_c0_seq1 274 469 -
Chr1	stalkie_big_nohaplotig	exon	145316672	145316865	100	-	.	Parent=comp153426_c0_seq1.mrna1;Target=comp153426_c0_seq1 470 663 -
Chr1	stalkie_big_nohaplotig	CDS	145315832	145315867	.	-	0	Parent=comp153426_c0_seq1.mrna1;Target=comp153426_c0_seq1 164 199 .
Chr1	stalkie_big_nohaplotig	CDS	145315933	145316006	.	-	2	Parent=comp153426_c0_seq1.mrna1;Target=comp153426_c0_seq1 200 273 .
Chr1	stalkie_big_nohaplotig	CDS	145316092	145316287	.	-	0	Parent=comp153426_c0_seq1.mrna1;Target=comp153426_c0_seq1 274 469 .
Chr1	stalkie_big_nohaplotig	CDS	145316672	145316692	.	-	0	Parent=comp153426_c0_seq1.mrna1;Target=comp153426_c0_seq1 470 490 .
Chr1	gffcl	locus	145319467	145324078	.	-	.	ID=RLOC_00012126;geneIDs=FBgn0022355.1.path1;transcripts=FBgn0022355.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145319467	145324078	.	-	.	ID=FBgn0022355.1.mrna1;geneID=FBgn0022355.1.path1;Name=FBgn0022355.1;Dir=sensecoverage=100.0;identity=99.2;matches=1884;mismatches=15;indels=0;unknowns=0;locus=RLOC_00012126
Chr1	stalkie_big_nohaplotig	exon	145319467	145319550	100	-	.	Parent=FBgn0022355.1.mrna1;Target=FBgn0022355.1 1816 1899 +
Chr1	stalkie_big_nohaplotig	exon	145319630	145320008	99	-	.	Parent=FBgn0022355.1.mrna1;Target=FBgn0022355.1 1437 1815 +
Chr1	stalkie_big_nohaplotig	exon	145320081	145320365	98	-	.	Parent=FBgn0022355.1.mrna1;Target=FBgn0022355.1 1152 1436 +
Chr1	stalkie_big_nohaplotig	exon	145320897	145321258	98	-	.	Parent=FBgn0022355.1.mrna1;Target=FBgn0022355.1 790 1151 +
Chr1	stalkie_big_nohaplotig	exon	145321375	145321532	97	-	.	Parent=FBgn0022355.1.mrna1;Target=FBgn0022355.1 632 789 +
Chr1	stalkie_big_nohaplotig	exon	145322493	145322652	100	-	.	Parent=FBgn0022355.1.mrna1;Target=FBgn0022355.1 472 631 +
Chr1	stalkie_big_nohaplotig	exon	145323486	145323604	100	-	.	Parent=FBgn0022355.1.mrna1;Target=FBgn0022355.1 353 471 +
Chr1	stalkie_big_nohaplotig	exon	145323668	145323910	100	-	.	Parent=FBgn0022355.1.mrna1;Target=FBgn0022355.1 110 352 +
Chr1	stalkie_big_nohaplotig	exon	145323970	145324078	99	-	.	Parent=FBgn0022355.1.mrna1;Target=FBgn0022355.1 1 109 +
Chr1	stalkie_big_nohaplotig	CDS	145319467	145319550	.	-	0	Parent=FBgn0022355.1.mrna1;Target=FBgn0022355.1 1816 1899 +
Chr1	stalkie_big_nohaplotig	CDS	145319630	145320008	.	-	1	Parent=FBgn0022355.1.mrna1;Target=FBgn0022355.1 1437 1815 +
Chr1	stalkie_big_nohaplotig	CDS	145320081	145320365	.	-	1	Parent=FBgn0022355.1.mrna1;Target=FBgn0022355.1 1152 1436 +
Chr1	stalkie_big_nohaplotig	CDS	145320897	145321258	.	-	0	Parent=FBgn0022355.1.mrna1;Target=FBgn0022355.1 790 1151 +
Chr1	stalkie_big_nohaplotig	CDS	145321375	145321532	.	-	2	Parent=FBgn0022355.1.mrna1;Target=FBgn0022355.1 632 789 +
Chr1	stalkie_big_nohaplotig	CDS	145322493	145322652	.	-	0	Parent=FBgn0022355.1.mrna1;Target=FBgn0022355.1 472 631 +
Chr1	stalkie_big_nohaplotig	CDS	145323486	145323604	.	-	2	Parent=FBgn0022355.1.mrna1;Target=FBgn0022355.1 353 471 +
Chr1	stalkie_big_nohaplotig	CDS	145323668	145323910	.	-	2	Parent=FBgn0022355.1.mrna1;Target=FBgn0022355.1 110 352 +
Chr1	stalkie_big_nohaplotig	CDS	145323970	145324078	.	-	0	Parent=FBgn0022355.1.mrna1;Target=FBgn0022355.1 1 109 +
Chr1	gffcl	locus	145329210	145329924	.	-	.	ID=RLOC_00012127;geneIDs=comp151652_c0_seq1.path1;transcripts=comp151652_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145329210	145329924	.	-	.	ID=comp151652_c0_seq1.mrna1;geneID=comp151652_c0_seq1.path1;Name=comp151652_c0_seq1;Dir=indeterminatecoverage=98.2;identity=99.7;matches=713;mismatches=2;indels=0;unknowns=0;Target=comp151652_c0_seq1 715 1 .;CDS_Target=comp151652_c0_seq1 616 113 .;locus=RLOC_00012127
Chr1	stalkie_big_nohaplotig	exon	145329210	145329924	99	-	.	Parent=comp151652_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145329309	145329812	.	-	0	Parent=comp151652_c0_seq1.mrna1
Chr1	gffcl	locus	145336242	145337258	.	-	.	ID=RLOC_00012128;geneIDs=comp150198_c0_seq1.path1;transcripts=comp150198_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145336242	145337258	.	-	.	ID=comp150198_c0_seq1.mrna1;geneID=comp150198_c0_seq1.path1;Name=comp150198_c0_seq1;Dir=indeterminatecoverage=97.8;identity=96.7;matches=1009;mismatches=8;indels=26;unknowns=0;Target=comp150198_c0_seq1 1067 25 .;CDS_Target=comp150198_c0_seq1 703 479 .;locus=RLOC_00012128
Chr1	stalkie_big_nohaplotig	exon	145336242	145337258	96	-	.	Parent=comp150198_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145336596	145336820	.	-	0	Parent=comp150198_c0_seq1.mrna1
Chr1	gffcl	locus	145348921	145349742	.	-	.	ID=RLOC_00012129;geneIDs=comp28377_c0_seq1.path1;transcripts=comp28377_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145348921	145349742	.	-	.	ID=comp28377_c0_seq1.mrna1;geneID=comp28377_c0_seq1.path1;Name=comp28377_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=818;mismatches=4;indels=0;unknowns=0;Target=comp28377_c0_seq1 822 1 .;CDS_Target=comp28377_c0_seq1 226 2 .;locus=RLOC_00012129
Chr1	stalkie_big_nohaplotig	exon	145348921	145349742	99	-	.	Parent=comp28377_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145349517	145349741	.	-	0	Parent=comp28377_c0_seq1.mrna1
Chr1	gffcl	locus	145357483	145357551	.	-	.	ID=RLOC_00012130;geneIDs=FBgn0026086.1.path1;transcripts=FBgn0026086.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145357483	145357551	.	-	.	ID=FBgn0026086.1.mrna1;geneID=FBgn0026086.1.path1;Name=FBgn0026086.1;Dir=indeterminatecoverage=3.6;identity=100.0;matches=69;mismatches=0;indels=0;unknowns=0;Target=FBgn0026086.1 69 1 .;locus=RLOC_00012130
Chr1	stalkie_big_nohaplotig	exon	145357483	145357551	100	-	.	Parent=FBgn0026086.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145357483	145357551	.	-	0	Parent=FBgn0026086.1.mrna1
Chr1	gffcl	locus	145362425	145364872	.	+	.	ID=RLOC_00012131;geneIDs=comp154673_c0_seq1.path1;transcripts=comp154673_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145362425	145364872	.	+	.	ID=comp154673_c0_seq1.mrna1;geneID=comp154673_c0_seq1.path1;Name=comp154673_c0_seq1;Dir=sensecoverage=100.0;identity=98.2;matches=586;mismatches=8;indels=3;unknowns=0;locus=RLOC_00012131
Chr1	stalkie_big_nohaplotig	exon	145362425	145362994	98	+	.	Parent=comp154673_c0_seq1.mrna1;Target=comp154673_c0_seq1 1 573 +
Chr1	stalkie_big_nohaplotig	exon	145364849	145364872	100	+	.	Parent=comp154673_c0_seq1.mrna1;Target=comp154673_c0_seq1 574 597 +
Chr1	stalkie_big_nohaplotig	CDS	145362762	145362994	.	+	0	Parent=comp154673_c0_seq1.mrna1;Target=comp154673_c0_seq1 341 573 +
Chr1	stalkie_big_nohaplotig	CDS	145364849	145364855	.	+	1	Parent=comp154673_c0_seq1.mrna1;Target=comp154673_c0_seq1 574 580 +
Chr1	gffcl	locus	145365010	145366734	.	+	.	ID=RLOC_00012132;geneIDs=FBgn0024996.1.path1;transcripts=FBgn0024996.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145365010	145366734	.	+	.	ID=FBgn0024996.1.mrna1;geneID=FBgn0024996.1.path1;Name=FBgn0024996.1;Dir=sensecoverage=100.0;identity=99.4;matches=1062;mismatches=6;indels=0;unknowns=0;locus=RLOC_00012132
Chr1	stalkie_big_nohaplotig	exon	145365010	145365074	100	+	.	Parent=FBgn0024996.1.mrna1;Target=FBgn0024996.1 1 65 +
Chr1	stalkie_big_nohaplotig	exon	145365128	145365214	98	+	.	Parent=FBgn0024996.1.mrna1;Target=FBgn0024996.1 66 152 +
Chr1	stalkie_big_nohaplotig	exon	145365277	145365409	99	+	.	Parent=FBgn0024996.1.mrna1;Target=FBgn0024996.1 153 285 +
Chr1	stalkie_big_nohaplotig	exon	145365813	145366136	99	+	.	Parent=FBgn0024996.1.mrna1;Target=FBgn0024996.1 286 609 +
Chr1	stalkie_big_nohaplotig	exon	145366218	145366606	99	+	.	Parent=FBgn0024996.1.mrna1;Target=FBgn0024996.1 610 998 +
Chr1	stalkie_big_nohaplotig	exon	145366665	145366734	100	+	.	Parent=FBgn0024996.1.mrna1;Target=FBgn0024996.1 999 1068 +
Chr1	stalkie_big_nohaplotig	CDS	145365010	145365074	.	+	0	Parent=FBgn0024996.1.mrna1;Target=FBgn0024996.1 1 65 +
Chr1	stalkie_big_nohaplotig	CDS	145365128	145365214	.	+	1	Parent=FBgn0024996.1.mrna1;Target=FBgn0024996.1 66 152 +
Chr1	stalkie_big_nohaplotig	CDS	145365277	145365409	.	+	1	Parent=FBgn0024996.1.mrna1;Target=FBgn0024996.1 153 285 +
Chr1	stalkie_big_nohaplotig	CDS	145365813	145366136	.	+	0	Parent=FBgn0024996.1.mrna1;Target=FBgn0024996.1 286 609 +
Chr1	stalkie_big_nohaplotig	CDS	145366218	145366606	.	+	0	Parent=FBgn0024996.1.mrna1;Target=FBgn0024996.1 610 998 +
Chr1	stalkie_big_nohaplotig	CDS	145366665	145366734	.	+	1	Parent=FBgn0024996.1.mrna1;Target=FBgn0024996.1 999 1068 +
Chr1	gffcl	locus	145371094	145374020	.	-	.	ID=RLOC_00012133;geneIDs=FBgn0024995.1.path1;transcripts=FBgn0024995.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145371094	145374020	.	-	.	ID=FBgn0024995.1.mrna1;geneID=FBgn0024995.1.path1;Name=FBgn0024995.1;Dir=sensecoverage=100.0;identity=96.5;matches=976;mismatches=29;indels=6;unknowns=0;locus=RLOC_00012133
Chr1	stalkie_big_nohaplotig	exon	145371094	145371425	99	-	.	Parent=FBgn0024995.1.mrna1;Target=FBgn0024995.1 680 1011 +
Chr1	stalkie_big_nohaplotig	exon	145371484	145371691	97	-	.	Parent=FBgn0024995.1.mrna1;Target=FBgn0024995.1 472 679 +
Chr1	stalkie_big_nohaplotig	exon	145373493	145373627	97	-	.	Parent=FBgn0024995.1.mrna1;Target=FBgn0024995.1 337 471 +
Chr1	stalkie_big_nohaplotig	exon	145373691	145374020	92	-	.	Parent=FBgn0024995.1.mrna1;Target=FBgn0024995.1 1 336 +
Chr1	stalkie_big_nohaplotig	CDS	145371094	145371425	.	-	2	Parent=FBgn0024995.1.mrna1;Target=FBgn0024995.1 680 1011 +
Chr1	stalkie_big_nohaplotig	CDS	145371484	145371691	.	-	0	Parent=FBgn0024995.1.mrna1;Target=FBgn0024995.1 472 679 +
Chr1	stalkie_big_nohaplotig	CDS	145373493	145373627	.	-	0	Parent=FBgn0024995.1.mrna1;Target=FBgn0024995.1 337 471 +
Chr1	stalkie_big_nohaplotig	CDS	145373691	145373951	.	-	0	Parent=FBgn0024995.1.mrna1;Target=FBgn0024995.1 76 336 +
Chr1	gffcl	locus	145384323	145384968	.	+	.	ID=RLOC_00012134;geneIDs=comp161137_c0_seq1.path1;transcripts=comp161137_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145384323	145384968	.	+	.	ID=comp161137_c0_seq1.mrna1;geneID=comp161137_c0_seq1.path1;Name=comp161137_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=635;mismatches=11;indels=4;unknowns=0;Target=comp161137_c0_seq1 650 1 .;CDS_Target=comp161137_c0_seq1 650 453 .;locus=RLOC_00012134
Chr1	stalkie_big_nohaplotig	exon	145384323	145384968	97	+	.	Parent=comp161137_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145384771	145384968	.	+	0	Parent=comp161137_c0_seq1.mrna1
Chr1	gffcl	locus	145385619	145386286	.	-	.	ID=RLOC_00012135;geneIDs=comp156409_c0_seq1.path1;transcripts=comp156409_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145385619	145386286	.	-	.	ID=comp156409_c0_seq1.mrna1;geneID=comp156409_c0_seq1.path1;Name=comp156409_c0_seq1;Dir=indeterminatecoverage=99.5;identity=81.3;matches=621;mismatches=32;indels=111;unknowns=0;Target=comp156409_c0_seq1 753 5 .;CDS_Target=comp156409_c0_seq1 426 379 .;locus=RLOC_00012135
Chr1	stalkie_big_nohaplotig	exon	145385619	145386286	81	-	.	Parent=comp156409_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145385917	145385964	.	-	0	Parent=comp156409_c0_seq1.mrna1
Chr1	gffcl	locus	145389804	145390096	.	-	.	ID=RLOC_00012136;geneIDs=comp147567_c0_seq1.path1;transcripts=comp147567_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145389804	145390096	.	-	.	ID=comp147567_c0_seq1.mrna1;geneID=comp147567_c0_seq1.path1;Name=comp147567_c0_seq1;Dir=indeterminatecoverage=99.7;identity=96.6;matches=287;mismatches=2;indels=8;unknowns=0;Target=comp147567_c0_seq1 294 2 .;CDS_Target=comp147567_c0_seq1 195 136 .;locus=RLOC_00012136
Chr1	stalkie_big_nohaplotig	exon	145389804	145390096	96	-	.	Parent=comp147567_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145389903	145389962	.	-	0	Parent=comp147567_c0_seq1.mrna1
Chr1	gffcl	locus	145394062	145395194	.	-	.	ID=RLOC_00012137;geneIDs=comp163796_c0_seq1.path1;transcripts=comp163796_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145394062	145395194	.	-	.	ID=comp163796_c0_seq1.mrna1;geneID=comp163796_c0_seq1.path1;Name=comp163796_c0_seq1;Dir=antisensecoverage=100.0;identity=94.8;matches=969;mismatches=25;indels=28;unknowns=0;Target=comp163796_c0_seq1 478 950 .;locus=RLOC_00012137
Chr1	stalkie_big_nohaplotig	exon	145394062	145394431	88	-	.	Parent=comp163796_c0_seq1.mrna1;Target=comp163796_c0_seq1 1 394 -
Chr1	stalkie_big_nohaplotig	exon	145394491	145394573	97	-	.	Parent=comp163796_c0_seq1.mrna1;Target=comp163796_c0_seq1 395 477 -
Chr1	stalkie_big_nohaplotig	exon	145394652	145395194	99	-	.	Parent=comp163796_c0_seq1.mrna1;Target=comp163796_c0_seq1 478 1020 -
Chr1	stalkie_big_nohaplotig	CDS	145394652	145395124	.	-	0	Parent=comp163796_c0_seq1.mrna1
Chr1	gffcl	locus	145397116	145397830	.	-	.	ID=RLOC_00012138;geneIDs=FBgn0013531.1.path1;transcripts=FBgn0013531.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145397116	145397830	.	-	.	ID=FBgn0013531.1.mrna1;geneID=FBgn0013531.1.path1;Name=FBgn0013531.1;Dir=indeterminatecoverage=99.7;identity=99.9;matches=714;mismatches=1;indels=0;unknowns=0;Target=FBgn0013531.1 716 2 .;CDS_Target=FBgn0013531.1 714 4 .;locus=RLOC_00012138
Chr1	stalkie_big_nohaplotig	exon	145397116	145397830	99	-	.	Parent=FBgn0013531.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145397118	145397828	.	-	0	Parent=FBgn0013531.1.mrna1
Chr1	gffcl	locus	145400704	145401678	.	+	.	ID=RLOC_00012140;geneIDs=comp153249_c0_seq1.path1;transcripts=comp153249_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145400704	145401678	.	+	.	ID=comp153249_c0_seq1.mrna1;geneID=comp153249_c0_seq1.path1;Name=comp153249_c0_seq1;Dir=indeterminatecoverage=100.0;identity=86.8;matches=426;mismatches=18;indels=47;unknowns=0;Target=comp153249_c0_seq1 95 3 .;locus=RLOC_00012140
Chr1	stalkie_big_nohaplotig	exon	145400704	145401033	84	+	.	Parent=comp153249_c0_seq1.mrna1;Target=comp153249_c0_seq1 323 1 .
Chr1	stalkie_big_nohaplotig	exon	145401039	145401100	90	+	.	Parent=comp153249_c0_seq1.mrna1;Target=comp153249_c0_seq1 586 525 .
Chr1	stalkie_big_nohaplotig	exon	145401600	145401678	94	+	.	Parent=comp153249_c0_seq1.mrna1;Target=comp153249_c0_seq1 665 587 .
Chr1	stalkie_big_nohaplotig	CDS	145400706	145400825	.	+	0	Parent=comp153249_c0_seq1.mrna1
Chr1	gffcl	locus	145424864	145429510	.	-	.	ID=RLOC_00012141;geneIDs=FBgn0022355.1.path2;transcripts=FBgn0022355.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	145424864	145429510	.	-	.	ID=FBgn0022355.1.mrna2;geneID=FBgn0022355.1.path2;Name=FBgn0022355.1;Dir=sensecoverage=100.0;identity=99.1;matches=1882;mismatches=17;indels=0;unknowns=0;locus=RLOC_00012141
Chr1	stalkie_big_nohaplotig	exon	145424864	145424947	100	-	.	Parent=FBgn0022355.1.mrna2;Target=FBgn0022355.1 1816 1899 +
Chr1	stalkie_big_nohaplotig	exon	145425027	145425405	99	-	.	Parent=FBgn0022355.1.mrna2;Target=FBgn0022355.1 1437 1815 +
Chr1	stalkie_big_nohaplotig	exon	145425478	145425762	99	-	.	Parent=FBgn0022355.1.mrna2;Target=FBgn0022355.1 1152 1436 +
Chr1	stalkie_big_nohaplotig	exon	145426295	145426656	98	-	.	Parent=FBgn0022355.1.mrna2;Target=FBgn0022355.1 790 1151 +
Chr1	stalkie_big_nohaplotig	exon	145426773	145426930	98	-	.	Parent=FBgn0022355.1.mrna2;Target=FBgn0022355.1 632 789 +
Chr1	stalkie_big_nohaplotig	exon	145427928	145428087	99	-	.	Parent=FBgn0022355.1.mrna2;Target=FBgn0022355.1 472 631 +
Chr1	stalkie_big_nohaplotig	exon	145428917	145429035	98	-	.	Parent=FBgn0022355.1.mrna2;Target=FBgn0022355.1 353 471 +
Chr1	stalkie_big_nohaplotig	exon	145429100	145429342	99	-	.	Parent=FBgn0022355.1.mrna2;Target=FBgn0022355.1 110 352 +
Chr1	stalkie_big_nohaplotig	exon	145429402	145429510	99	-	.	Parent=FBgn0022355.1.mrna2;Target=FBgn0022355.1 1 109 +
Chr1	stalkie_big_nohaplotig	CDS	145424864	145424947	.	-	0	Parent=FBgn0022355.1.mrna2;Target=FBgn0022355.1 1816 1899 +
Chr1	stalkie_big_nohaplotig	CDS	145425027	145425405	.	-	1	Parent=FBgn0022355.1.mrna2;Target=FBgn0022355.1 1437 1815 +
Chr1	stalkie_big_nohaplotig	CDS	145425478	145425762	.	-	1	Parent=FBgn0022355.1.mrna2;Target=FBgn0022355.1 1152 1436 +
Chr1	stalkie_big_nohaplotig	CDS	145426295	145426656	.	-	0	Parent=FBgn0022355.1.mrna2;Target=FBgn0022355.1 790 1151 +
Chr1	stalkie_big_nohaplotig	CDS	145426773	145426930	.	-	2	Parent=FBgn0022355.1.mrna2;Target=FBgn0022355.1 632 789 +
Chr1	stalkie_big_nohaplotig	CDS	145427928	145428087	.	-	0	Parent=FBgn0022355.1.mrna2;Target=FBgn0022355.1 472 631 +
Chr1	stalkie_big_nohaplotig	CDS	145428917	145429035	.	-	2	Parent=FBgn0022355.1.mrna2;Target=FBgn0022355.1 353 471 +
Chr1	stalkie_big_nohaplotig	CDS	145429100	145429342	.	-	2	Parent=FBgn0022355.1.mrna2;Target=FBgn0022355.1 110 352 +
Chr1	stalkie_big_nohaplotig	CDS	145429402	145429510	.	-	0	Parent=FBgn0022355.1.mrna2;Target=FBgn0022355.1 1 109 +
Chr1	gffcl	locus	145435686	145438302	.	+	.	ID=RLOC_00012142;geneIDs=comp157865_c0_seq1.path1;transcripts=comp157865_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145435686	145438302	.	+	.	ID=comp157865_c0_seq1.mrna1;geneID=comp157865_c0_seq1.path1;Name=comp157865_c0_seq1;Dir=antisensecoverage=99.2;identity=98.2;matches=925;mismatches=17;indels=0;unknowns=0;Target=comp157865_c0_seq1 235 819 .;locus=RLOC_00012142
Chr1	stalkie_big_nohaplotig	exon	145435686	145435798	100	+	.	Parent=comp157865_c0_seq1.mrna1;Target=comp157865_c0_seq1 830 942 -
Chr1	stalkie_big_nohaplotig	exon	145437474	145438302	97	+	.	Parent=comp157865_c0_seq1.mrna1;Target=comp157865_c0_seq1 1 829 -
Chr1	stalkie_big_nohaplotig	CDS	145437484	145438068	.	+	0	Parent=comp157865_c0_seq1.mrna1
Chr1	gffcl	locus	145438561	145485445	.	+	.	ID=RLOC_00012143;geneIDs=FBgn0030520.1.path1,comp150061_c0_seq1.path1,comp162358_c2_seq1.path1;transcripts=comp162358_c2_seq1.mrna1,comp150061_c0_seq1.mrna1,FBgn0030520.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145438561	145485445	.	+	.	ID=comp162358_c2_seq1.mrna1;geneID=comp162358_c2_seq1.path1;Name=comp162358_c2_seq1;Dir=indeterminatecoverage=91.9;identity=99.1;matches=5515;mismatches=49;indels=1;unknowns=0;locus=RLOC_00012143
Chr1	stalkie_big_nohaplotig	exon	145438561	145438601	95	+	.	Parent=comp162358_c2_seq1.mrna1;Target=comp162358_c2_seq1 536 496 .
Chr1	stalkie_big_nohaplotig	exon	145439245	145439253	100	+	.	Parent=comp162358_c2_seq1.mrna1;Target=comp162358_c2_seq1 545 537 .
Chr1	stalkie_big_nohaplotig	exon	145447041	145448227	97	+	.	Parent=comp162358_c2_seq1.mrna1;Target=comp162358_c2_seq1 1775 589 .
Chr1	stalkie_big_nohaplotig	exon	145448288	145449784	99	+	.	Parent=comp162358_c2_seq1.mrna1;Target=comp162358_c2_seq1 3272 1776 .
Chr1	stalkie_big_nohaplotig	exon	145463909	145464936	99	+	.	Parent=comp162358_c2_seq1.mrna1;Target=comp162358_c2_seq1 4300 3273 .
Chr1	stalkie_big_nohaplotig	exon	145465046	145465473	99	+	.	Parent=comp162358_c2_seq1.mrna1;Target=comp162358_c2_seq1 4728 4301 .
Chr1	stalkie_big_nohaplotig	exon	145465594	145465733	100	+	.	Parent=comp162358_c2_seq1.mrna1;Target=comp162358_c2_seq1 4868 4729 .
Chr1	stalkie_big_nohaplotig	exon	145477899	145478213	97	+	.	Parent=comp162358_c2_seq1.mrna1;Target=comp162358_c2_seq1 5183 4869 .
Chr1	stalkie_big_nohaplotig	exon	145484527	145485445	99	+	.	Parent=comp162358_c2_seq1.mrna1;Target=comp162358_c2_seq1 6103 5184 .
Chr1	stalkie_big_nohaplotig	CDS	145464141	145464936	.	+	0	Parent=comp162358_c2_seq1.mrna1;Target=comp162358_c2_seq1 4300 3505 .
Chr1	stalkie_big_nohaplotig	CDS	145465046	145465473	.	+	2	Parent=comp162358_c2_seq1.mrna1;Target=comp162358_c2_seq1 4728 4301 .
Chr1	stalkie_big_nohaplotig	CDS	145465594	145465733	.	+	0	Parent=comp162358_c2_seq1.mrna1;Target=comp162358_c2_seq1 4868 4729 .
Chr1	stalkie_big_nohaplotig	CDS	145477899	145478043	.	+	1	Parent=comp162358_c2_seq1.mrna1;Target=comp162358_c2_seq1 5013 4869 .
Chr1	stalkie_big_nohaplotig	mRNA	145446431	145447066	.	+	.	ID=comp150061_c0_seq1.mrna1;geneID=comp150061_c0_seq1.path1;Name=comp150061_c0_seq1;Dir=indeterminatecoverage=97.2;identity=94.0;matches=599;mismatches=31;indels=7;unknowns=0;Target=comp150061_c0_seq1 631 1 .;CDS_Target=comp150061_c0_seq1 75 1 .;locus=RLOC_00012143
Chr1	stalkie_big_nohaplotig	exon	145446431	145447066	94	+	.	Parent=comp150061_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145446431	145446505	.	+	0	Parent=comp150061_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145464108	145484596	.	+	.	ID=FBgn0030520.1.mrna1;geneID=FBgn0030520.1.path1;Name=FBgn0030520.1;Dir=sensecoverage=100.0;identity=99.7;matches=1462;mismatches=5;indels=0;unknowns=0;locus=RLOC_00012143
Chr1	stalkie_big_nohaplotig	exon	145464108	145464936	99	+	.	Parent=FBgn0030520.1.mrna1;Target=FBgn0030520.1 1 829 +
Chr1	stalkie_big_nohaplotig	exon	145465046	145465473	99	+	.	Parent=FBgn0030520.1.mrna1;Target=FBgn0030520.1 830 1257 +
Chr1	stalkie_big_nohaplotig	exon	145465594	145465733	100	+	.	Parent=FBgn0030520.1.mrna1;Target=FBgn0030520.1 1258 1397 +
Chr1	stalkie_big_nohaplotig	exon	145484527	145484596	100	+	.	Parent=FBgn0030520.1.mrna1;Target=FBgn0030520.1 1398 1467 +
Chr1	stalkie_big_nohaplotig	CDS	145464108	145464936	.	+	0	Parent=FBgn0030520.1.mrna1;Target=FBgn0030520.1 1 829 +
Chr1	stalkie_big_nohaplotig	CDS	145465046	145465473	.	+	2	Parent=FBgn0030520.1.mrna1;Target=FBgn0030520.1 830 1257 +
Chr1	stalkie_big_nohaplotig	CDS	145465594	145465733	.	+	0	Parent=FBgn0030520.1.mrna1;Target=FBgn0030520.1 1258 1397 +
Chr1	stalkie_big_nohaplotig	CDS	145484527	145484596	.	+	1	Parent=FBgn0030520.1.mrna1;Target=FBgn0030520.1 1398 1467 +
Chr1	gffcl	locus	145509375	145509896	.	+	.	ID=RLOC_00012145;geneIDs=FBgn0029830.1.path1;transcripts=FBgn0029830.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145509375	145509896	.	+	.	ID=FBgn0029830.1.mrna1;geneID=FBgn0029830.1.path1;Name=FBgn0029830.1;Dir=antisensecoverage=6.9;identity=87.9;matches=188;mismatches=1;indels=25;unknowns=0;locus=RLOC_00012145
Chr1	stalkie_big_nohaplotig	exon	145509375	145509449	100	+	.	Parent=FBgn0029830.1.mrna1;Target=FBgn0029830.1 140 214 -
Chr1	stalkie_big_nohaplotig	exon	145509783	145509896	81	+	.	Parent=FBgn0029830.1.mrna1;Target=FBgn0029830.1 1 139 -
Chr1	gffcl	locus	145519356	145527477	.	-	.	ID=RLOC_00012146;geneIDs=FBgn0029828.1.path1;transcripts=FBgn0029828.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145519356	145527477	.	-	.	ID=FBgn0029828.1.mrna1;geneID=FBgn0029828.1.path1;Name=FBgn0029828.1;Dir=sensecoverage=100.0;identity=99.8;matches=952;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012146
Chr1	stalkie_big_nohaplotig	exon	145519356	145519712	100	-	.	Parent=FBgn0029828.1.mrna1;Target=FBgn0029828.1 598 954 +
Chr1	stalkie_big_nohaplotig	exon	145519825	145520131	99	-	.	Parent=FBgn0029828.1.mrna1;Target=FBgn0029828.1 291 597 +
Chr1	stalkie_big_nohaplotig	exon	145520246	145520450	99	-	.	Parent=FBgn0029828.1.mrna1;Target=FBgn0029828.1 86 290 +
Chr1	stalkie_big_nohaplotig	exon	145527393	145527477	100	-	.	Parent=FBgn0029828.1.mrna1;Target=FBgn0029828.1 1 85 +
Chr1	stalkie_big_nohaplotig	CDS	145519356	145519712	.	-	0	Parent=FBgn0029828.1.mrna1;Target=FBgn0029828.1 598 954 +
Chr1	stalkie_big_nohaplotig	CDS	145519825	145520131	.	-	1	Parent=FBgn0029828.1.mrna1;Target=FBgn0029828.1 291 597 +
Chr1	stalkie_big_nohaplotig	CDS	145520246	145520450	.	-	2	Parent=FBgn0029828.1.mrna1;Target=FBgn0029828.1 86 290 +
Chr1	stalkie_big_nohaplotig	CDS	145527393	145527477	.	-	0	Parent=FBgn0029828.1.mrna1;Target=FBgn0029828.1 1 85 +
Chr1	gffcl	locus	145558235	145635140	.	+	.	ID=RLOC_00012147;geneIDs=FBgn0026086.1.path2;transcripts=FBgn0026086.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	145558235	145635140	.	+	.	ID=FBgn0026086.1.mrna2;geneID=FBgn0026086.1.path2;Name=FBgn0026086.1;Dir=sensecoverage=96.4;identity=99.6;matches=1862;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012147
Chr1	stalkie_big_nohaplotig	exon	145558235	145558322	100	+	.	Parent=FBgn0026086.1.mrna2;Target=FBgn0026086.1 70 157 +
Chr1	stalkie_big_nohaplotig	exon	145558636	145558790	99	+	.	Parent=FBgn0026086.1.mrna2;Target=FBgn0026086.1 158 312 +
Chr1	stalkie_big_nohaplotig	exon	145617646	145617814	100	+	.	Parent=FBgn0026086.1.mrna2;Target=FBgn0026086.1 313 481 +
Chr1	stalkie_big_nohaplotig	exon	145625775	145625954	100	+	.	Parent=FBgn0026086.1.mrna2;Target=FBgn0026086.1 482 661 +
Chr1	stalkie_big_nohaplotig	exon	145626028	145626308	99	+	.	Parent=FBgn0026086.1.mrna2;Target=FBgn0026086.1 662 942 +
Chr1	stalkie_big_nohaplotig	exon	145626746	145626896	100	+	.	Parent=FBgn0026086.1.mrna2;Target=FBgn0026086.1 943 1093 +
Chr1	stalkie_big_nohaplotig	exon	145630042	145630210	100	+	.	Parent=FBgn0026086.1.mrna2;Target=FBgn0026086.1 1094 1262 +
Chr1	stalkie_big_nohaplotig	exon	145631219	145631318	100	+	.	Parent=FBgn0026086.1.mrna2;Target=FBgn0026086.1 1263 1362 +
Chr1	stalkie_big_nohaplotig	exon	145634506	145634985	98	+	.	Parent=FBgn0026086.1.mrna2;Target=FBgn0026086.1 1363 1842 +
Chr1	stalkie_big_nohaplotig	exon	145635045	145635140	100	+	.	Parent=FBgn0026086.1.mrna2;Target=FBgn0026086.1 1843 1938 +
Chr1	stalkie_big_nohaplotig	CDS	145558235	145558322	.	+	0	Parent=FBgn0026086.1.mrna2;Target=FBgn0026086.1 70 157 +
Chr1	stalkie_big_nohaplotig	CDS	145558636	145558790	.	+	2	Parent=FBgn0026086.1.mrna2;Target=FBgn0026086.1 158 312 +
Chr1	stalkie_big_nohaplotig	CDS	145617646	145617814	.	+	0	Parent=FBgn0026086.1.mrna2;Target=FBgn0026086.1 313 481 +
Chr1	stalkie_big_nohaplotig	CDS	145625775	145625954	.	+	2	Parent=FBgn0026086.1.mrna2;Target=FBgn0026086.1 482 661 +
Chr1	stalkie_big_nohaplotig	CDS	145626028	145626308	.	+	2	Parent=FBgn0026086.1.mrna2;Target=FBgn0026086.1 662 942 +
Chr1	stalkie_big_nohaplotig	CDS	145626746	145626896	.	+	0	Parent=FBgn0026086.1.mrna2;Target=FBgn0026086.1 943 1093 +
Chr1	stalkie_big_nohaplotig	CDS	145630042	145630210	.	+	2	Parent=FBgn0026086.1.mrna2;Target=FBgn0026086.1 1094 1262 +
Chr1	stalkie_big_nohaplotig	CDS	145631219	145631318	.	+	1	Parent=FBgn0026086.1.mrna2;Target=FBgn0026086.1 1263 1362 +
Chr1	stalkie_big_nohaplotig	CDS	145634506	145634985	.	+	0	Parent=FBgn0026086.1.mrna2;Target=FBgn0026086.1 1363 1842 +
Chr1	stalkie_big_nohaplotig	CDS	145635045	145635140	.	+	0	Parent=FBgn0026086.1.mrna2;Target=FBgn0026086.1 1843 1938 +
Chr1	gffcl	locus	145563602	145564574	.	-	.	ID=RLOC_00012148;geneIDs=comp153980_c0_seq1.path1;transcripts=comp153980_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145563602	145564574	.	-	.	ID=comp153980_c0_seq1.mrna1;geneID=comp153980_c0_seq1.path1;Name=comp153980_c0_seq1;Dir=antisensecoverage=96.5;identity=98.5;matches=881;mismatches=13;indels=0;unknowns=0;locus=RLOC_00012148
Chr1	stalkie_big_nohaplotig	exon	145563602	145563756	96	-	.	Parent=comp153980_c0_seq1.mrna1;Target=comp153980_c0_seq1 14 168 -
Chr1	stalkie_big_nohaplotig	exon	145563836	145564574	99	-	.	Parent=comp153980_c0_seq1.mrna1;Target=comp153980_c0_seq1 169 907 -
Chr1	stalkie_big_nohaplotig	CDS	145563737	145563756	.	-	2	Parent=comp153980_c0_seq1.mrna1;Target=comp153980_c0_seq1 149 168 .
Chr1	stalkie_big_nohaplotig	CDS	145563836	145564448	.	-	0	Parent=comp153980_c0_seq1.mrna1;Target=comp153980_c0_seq1 169 781 .
Chr1	gffcl	locus	145624222	145625314	.	.	.	ID=RLOC_00012149;geneIDs=comp144437_c0_seq1.path1,comp145165_c0_seq1.path1;transcripts=comp144437_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145624222	145625046	.	-	.	ID=comp144437_c0_seq1.mrna1;geneID=comp144437_c0_seq1.path1;Name=comp144437_c0_seq1;Dir=indeterminatecoverage=97.7;identity=95.8;matches=790;mismatches=26;indels=9;unknowns=0;Target=comp144437_c0_seq1 835 20 .;CDS_Target=comp144437_c0_seq1 265 20 .;locus=RLOC_00012149
Chr1	stalkie_big_nohaplotig	exon	145624222	145625046	95	-	.	Parent=comp144437_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145624792	145625046	.	-	0	Parent=comp144437_c0_seq1.mrna1
Chr1	gffcl	locus	145628095	145628712	.	-	.	ID=RLOC_00012150;geneIDs=comp160387_c0_seq1.path1;transcripts=comp160387_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145628095	145628712	.	-	.	ID=comp160387_c0_seq1.mrna1;geneID=comp160387_c0_seq1.path1;Name=comp160387_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=599;mismatches=9;indels=10;unknowns=0;Target=comp160387_c0_seq1 608 1 .;CDS_Target=comp160387_c0_seq1 608 528 .;locus=RLOC_00012150
Chr1	stalkie_big_nohaplotig	exon	145628095	145628712	96	-	.	Parent=comp160387_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145628095	145628175	.	-	0	Parent=comp160387_c0_seq1.mrna1
Chr1	gffcl	locus	145629395	145636584	.	-	.	ID=RLOC_00012151;geneIDs=comp142881_c0_seq1.path1;transcripts=comp142881_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145629395	145636584	.	-	.	ID=comp142881_c0_seq1.mrna1;geneID=comp142881_c0_seq1.path1;Name=comp142881_c0_seq1;Dir=indeterminatecoverage=73.8;identity=99.0;matches=581;mismatches=2;indels=4;unknowns=0;Target=comp142881_c0_seq1 191 18 .;locus=RLOC_00012151
Chr1	stalkie_big_nohaplotig	exon	145629395	145629400	100	-	.	Parent=comp142881_c0_seq1.mrna1;Target=comp142881_c0_seq1 611 606 .
Chr1	stalkie_big_nohaplotig	exon	145629418	145629426	100	-	.	Parent=comp142881_c0_seq1.mrna1;Target=comp142881_c0_seq1 596 588 .
Chr1	stalkie_big_nohaplotig	exon	145636017	145636584	98	-	.	Parent=comp142881_c0_seq1.mrna1;Target=comp142881_c0_seq1 587 16 .
Chr1	stalkie_big_nohaplotig	CDS	145636409	145636582	.	-	0	Parent=comp142881_c0_seq1.mrna1
Chr1	gffcl	locus	145636866	145637223	.	+	.	ID=RLOC_00012152;geneIDs=comp115870_c0_seq1.path1;transcripts=comp115870_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145636866	145637223	.	+	.	ID=comp115870_c0_seq1.mrna1;geneID=comp115870_c0_seq1.path1;Name=comp115870_c0_seq1;Dir=indeterminatecoverage=88.3;identity=97.0;matches=353;mismatches=5;indels=6;unknowns=0;Target=comp115870_c0_seq1 411 48 .;CDS_Target=comp115870_c0_seq1 103 50 .;locus=RLOC_00012152
Chr1	stalkie_big_nohaplotig	exon	145636866	145637223	96	+	.	Parent=comp115870_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145636868	145636921	.	+	0	Parent=comp115870_c0_seq1.mrna1
Chr1	gffcl	locus	145638577	145639094	.	-	.	ID=RLOC_00012153;geneIDs=comp151362_c0_seq1.path1;transcripts=comp151362_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145638577	145639094	.	-	.	ID=comp151362_c0_seq1.mrna1;geneID=comp151362_c0_seq1.path1;Name=comp151362_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.0;matches=515;mismatches=3;indels=2;unknowns=0;Target=comp151362_c0_seq1 520 1 .;CDS_Target=comp151362_c0_seq1 194 117 .;locus=RLOC_00012153
Chr1	stalkie_big_nohaplotig	exon	145638577	145639094	99	-	.	Parent=comp151362_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145638901	145638978	.	-	0	Parent=comp151362_c0_seq1.mrna1
Chr1	gffcl	locus	145686739	145697217	.	+	.	ID=RLOC_00012155;geneIDs=FBgn0029003.1.path1;transcripts=FBgn0029003.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145686739	145697217	.	+	.	ID=FBgn0029003.1.mrna1;geneID=FBgn0029003.1.path1;Name=FBgn0029003.1;Dir=sensecoverage=100.0;identity=99.5;matches=1194;mismatches=6;indels=0;unknowns=0;locus=RLOC_00012155
Chr1	stalkie_big_nohaplotig	exon	145686739	145687591	99	+	.	Parent=FBgn0029003.1.mrna1;Target=FBgn0029003.1 1 853 +
Chr1	stalkie_big_nohaplotig	exon	145696871	145697217	99	+	.	Parent=FBgn0029003.1.mrna1;Target=FBgn0029003.1 854 1200 +
Chr1	stalkie_big_nohaplotig	CDS	145686844	145687591	.	+	0	Parent=FBgn0029003.1.mrna1;Target=FBgn0029003.1 106 853 +
Chr1	stalkie_big_nohaplotig	CDS	145696871	145697217	.	+	2	Parent=FBgn0029003.1.mrna1;Target=FBgn0029003.1 854 1200 +
Chr1	gffcl	locus	145719524	145720310	.	+	.	ID=RLOC_00012156;geneIDs=comp147276_c0_seq1.path1;transcripts=comp147276_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145719524	145720310	.	+	.	ID=comp147276_c0_seq1.mrna1;geneID=comp147276_c0_seq1.path1;Name=comp147276_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.4;matches=783;mismatches=4;indels=1;unknowns=0;Target=comp147276_c0_seq1 788 1 .;CDS_Target=comp147276_c0_seq1 236 3 .;locus=RLOC_00012156
Chr1	stalkie_big_nohaplotig	exon	145719524	145720310	99	+	.	Parent=comp147276_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145719526	145719759	.	+	0	Parent=comp147276_c0_seq1.mrna1
Chr1	gffcl	locus	145720632	145725969	.	+	.	ID=RLOC_00012157;geneIDs=FBgn0027546.1.path1;transcripts=FBgn0027546.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145720632	145725969	.	+	.	ID=FBgn0027546.1.mrna1;geneID=FBgn0027546.1.path1;Name=FBgn0027546.1;Dir=sensecoverage=100.0;identity=99.7;matches=1116;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012157
Chr1	stalkie_big_nohaplotig	exon	145720632	145720849	100	+	.	Parent=FBgn0027546.1.mrna1;Target=FBgn0027546.1 1 218 +
Chr1	stalkie_big_nohaplotig	exon	145725001	145725554	99	+	.	Parent=FBgn0027546.1.mrna1;Target=FBgn0027546.1 219 772 +
Chr1	stalkie_big_nohaplotig	exon	145725623	145725969	100	+	.	Parent=FBgn0027546.1.mrna1;Target=FBgn0027546.1 773 1119 +
Chr1	stalkie_big_nohaplotig	CDS	145720632	145720849	.	+	0	Parent=FBgn0027546.1.mrna1;Target=FBgn0027546.1 1 218 +
Chr1	stalkie_big_nohaplotig	CDS	145725001	145725554	.	+	1	Parent=FBgn0027546.1.mrna1;Target=FBgn0027546.1 219 772 +
Chr1	stalkie_big_nohaplotig	CDS	145725623	145725969	.	+	2	Parent=FBgn0027546.1.mrna1;Target=FBgn0027546.1 773 1119 +
Chr1	gffcl	locus	145745095	145745612	.	+	.	ID=RLOC_00012158;geneIDs=comp151362_c0_seq1.path2;transcripts=comp151362_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	145745095	145745612	.	+	.	ID=comp151362_c0_seq1.mrna2;geneID=comp151362_c0_seq1.path2;Name=comp151362_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.0;matches=515;mismatches=3;indels=2;unknowns=0;Target=comp151362_c0_seq1 520 1 .;CDS_Target=comp151362_c0_seq1 194 117 .;locus=RLOC_00012158
Chr1	stalkie_big_nohaplotig	exon	145745095	145745612	99	+	.	Parent=comp151362_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	145745211	145745288	.	+	0	Parent=comp151362_c0_seq1.mrna2
Chr1	gffcl	locus	145788145	145792085	.	+	.	ID=RLOC_00012159;geneIDs=FBgn0030925.1.path1;transcripts=FBgn0030925.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145788145	145792085	.	+	.	ID=FBgn0030925.1.mrna1;geneID=FBgn0030925.1.path1;Name=FBgn0030925.1;Dir=sensecoverage=100.0;identity=99.6;matches=1159;mismatches=5;indels=0;unknowns=0;locus=RLOC_00012159
Chr1	stalkie_big_nohaplotig	exon	145788145	145788253	97	+	.	Parent=FBgn0030925.1.mrna1;Target=FBgn0030925.1 1 109 +
Chr1	stalkie_big_nohaplotig	exon	145789696	145789882	100	+	.	Parent=FBgn0030925.1.mrna1;Target=FBgn0030925.1 110 296 +
Chr1	stalkie_big_nohaplotig	exon	145789944	145790008	100	+	.	Parent=FBgn0030925.1.mrna1;Target=FBgn0030925.1 297 361 +
Chr1	stalkie_big_nohaplotig	exon	145791083	145791381	100	+	.	Parent=FBgn0030925.1.mrna1;Target=FBgn0030925.1 362 660 +
Chr1	stalkie_big_nohaplotig	exon	145791504	145791687	100	+	.	Parent=FBgn0030925.1.mrna1;Target=FBgn0030925.1 661 844 +
Chr1	stalkie_big_nohaplotig	exon	145791766	145792085	99	+	.	Parent=FBgn0030925.1.mrna1;Target=FBgn0030925.1 845 1164 +
Chr1	stalkie_big_nohaplotig	CDS	145788145	145788253	.	+	0	Parent=FBgn0030925.1.mrna1;Target=FBgn0030925.1 1 109 +
Chr1	stalkie_big_nohaplotig	CDS	145789696	145789882	.	+	2	Parent=FBgn0030925.1.mrna1;Target=FBgn0030925.1 110 296 +
Chr1	stalkie_big_nohaplotig	CDS	145789944	145790008	.	+	1	Parent=FBgn0030925.1.mrna1;Target=FBgn0030925.1 297 361 +
Chr1	stalkie_big_nohaplotig	CDS	145791083	145791381	.	+	2	Parent=FBgn0030925.1.mrna1;Target=FBgn0030925.1 362 660 +
Chr1	stalkie_big_nohaplotig	CDS	145791504	145791687	.	+	0	Parent=FBgn0030925.1.mrna1;Target=FBgn0030925.1 661 844 +
Chr1	stalkie_big_nohaplotig	CDS	145791766	145792085	.	+	2	Parent=FBgn0030925.1.mrna1;Target=FBgn0030925.1 845 1164 +
Chr1	gffcl	locus	145793726	145832053	.	-	.	ID=RLOC_00012160;geneIDs=FBgn0029831.1.path1;transcripts=FBgn0029831.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145793726	145832053	.	-	.	ID=FBgn0029831.1.mrna1;geneID=FBgn0029831.1.path1;Name=FBgn0029831.1;Dir=sensecoverage=100.0;identity=99.4;matches=1595;mismatches=10;indels=0;unknowns=0;locus=RLOC_00012160
Chr1	stalkie_big_nohaplotig	exon	145793726	145794132	100	-	.	Parent=FBgn0029831.1.mrna1;Target=FBgn0029831.1 1199 1605 +
Chr1	stalkie_big_nohaplotig	exon	145795261	145795435	98	-	.	Parent=FBgn0029831.1.mrna1;Target=FBgn0029831.1 1024 1198 +
Chr1	stalkie_big_nohaplotig	exon	145795538	145796011	99	-	.	Parent=FBgn0029831.1.mrna1;Target=FBgn0029831.1 550 1023 +
Chr1	stalkie_big_nohaplotig	exon	145796171	145796332	99	-	.	Parent=FBgn0029831.1.mrna1;Target=FBgn0029831.1 388 549 +
Chr1	stalkie_big_nohaplotig	exon	145796400	145796665	98	-	.	Parent=FBgn0029831.1.mrna1;Target=FBgn0029831.1 122 387 +
Chr1	stalkie_big_nohaplotig	exon	145831933	145832053	100	-	.	Parent=FBgn0029831.1.mrna1;Target=FBgn0029831.1 1 121 +
Chr1	stalkie_big_nohaplotig	CDS	145793726	145794132	.	-	2	Parent=FBgn0029831.1.mrna1;Target=FBgn0029831.1 1199 1605 +
Chr1	stalkie_big_nohaplotig	CDS	145795261	145795435	.	-	0	Parent=FBgn0029831.1.mrna1;Target=FBgn0029831.1 1024 1198 +
Chr1	stalkie_big_nohaplotig	CDS	145795538	145796011	.	-	0	Parent=FBgn0029831.1.mrna1;Target=FBgn0029831.1 550 1023 +
Chr1	stalkie_big_nohaplotig	CDS	145796171	145796332	.	-	0	Parent=FBgn0029831.1.mrna1;Target=FBgn0029831.1 388 549 +
Chr1	stalkie_big_nohaplotig	CDS	145796400	145796665	.	-	2	Parent=FBgn0029831.1.mrna1;Target=FBgn0029831.1 122 387 +
Chr1	stalkie_big_nohaplotig	CDS	145831933	145832053	.	-	0	Parent=FBgn0029831.1.mrna1;Target=FBgn0029831.1 1 121 +
Chr1	gffcl	locus	145805085	145805734	.	+	.	ID=RLOC_00012161;geneIDs=comp147572_c0_seq1.path1;transcripts=comp147572_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145805085	145805734	.	+	.	ID=comp147572_c0_seq1.mrna1;geneID=comp147572_c0_seq1.path1;Name=comp147572_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=640;mismatches=3;indels=7;unknowns=0;Target=comp147572_c0_seq1 643 1 .;CDS_Target=comp147572_c0_seq1 289 2 .;locus=RLOC_00012161
Chr1	stalkie_big_nohaplotig	exon	145805085	145805734	98	+	.	Parent=comp147572_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145805086	145805373	.	+	0	Parent=comp147572_c0_seq1.mrna1
Chr1	gffcl	locus	145817704	145821367	.	+	.	ID=RLOC_00012163;geneIDs=FBgn0030925.2.path1;transcripts=FBgn0030925.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145817704	145821367	.	+	.	ID=FBgn0030925.2.mrna1;geneID=FBgn0030925.2.path1;Name=FBgn0030925.2;Dir=sensecoverage=100.0;identity=99.2;matches=1170;mismatches=9;indels=0;unknowns=0;locus=RLOC_00012163
Chr1	stalkie_big_nohaplotig	exon	145817704	145817827	97	+	.	Parent=FBgn0030925.2.mrna1;Target=FBgn0030925.2 1 124 +
Chr1	stalkie_big_nohaplotig	exon	145819890	145820073	99	+	.	Parent=FBgn0030925.2.mrna1;Target=FBgn0030925.2 125 308 +
Chr1	stalkie_big_nohaplotig	exon	145820134	145820186	100	+	.	Parent=FBgn0030925.2.mrna1;Target=FBgn0030925.2 309 361 +
Chr1	stalkie_big_nohaplotig	exon	145820411	145820706	98	+	.	Parent=FBgn0030925.2.mrna1;Target=FBgn0030925.2 362 657 +
Chr1	stalkie_big_nohaplotig	exon	145820776	145820959	100	+	.	Parent=FBgn0030925.2.mrna1;Target=FBgn0030925.2 658 841 +
Chr1	stalkie_big_nohaplotig	exon	145821030	145821367	99	+	.	Parent=FBgn0030925.2.mrna1;Target=FBgn0030925.2 842 1179 +
Chr1	stalkie_big_nohaplotig	CDS	145817704	145817827	.	+	0	Parent=FBgn0030925.2.mrna1;Target=FBgn0030925.2 1 124 +
Chr1	stalkie_big_nohaplotig	CDS	145819890	145820073	.	+	2	Parent=FBgn0030925.2.mrna1;Target=FBgn0030925.2 125 308 +
Chr1	stalkie_big_nohaplotig	CDS	145820134	145820186	.	+	1	Parent=FBgn0030925.2.mrna1;Target=FBgn0030925.2 309 361 +
Chr1	stalkie_big_nohaplotig	CDS	145820411	145820706	.	+	2	Parent=FBgn0030925.2.mrna1;Target=FBgn0030925.2 362 657 +
Chr1	stalkie_big_nohaplotig	CDS	145820776	145820959	.	+	0	Parent=FBgn0030925.2.mrna1;Target=FBgn0030925.2 658 841 +
Chr1	stalkie_big_nohaplotig	CDS	145821030	145821367	.	+	2	Parent=FBgn0030925.2.mrna1;Target=FBgn0030925.2 842 1179 +
Chr1	gffcl	locus	145824457	145829339	.	+	.	ID=RLOC_00012164;geneIDs=FBgn0030925.4.path1,comp159784_c0_seq1.path1;transcripts=comp159784_c0_seq1.mrna1,FBgn0030925.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145824457	145829339	.	+	.	ID=comp159784_c0_seq1.mrna1;geneID=comp159784_c0_seq1.path1;Name=comp159784_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=1903;mismatches=7;indels=1;unknowns=0;locus=RLOC_00012164
Chr1	stalkie_big_nohaplotig	exon	145824457	145824654	100	+	.	Parent=comp159784_c0_seq1.mrna1;Target=comp159784_c0_seq1 1713 1910 -
Chr1	stalkie_big_nohaplotig	exon	145826726	145826767	100	+	.	Parent=comp159784_c0_seq1.mrna1;Target=comp159784_c0_seq1 1671 1712 -
Chr1	stalkie_big_nohaplotig	exon	145827249	145827462	99	+	.	Parent=comp159784_c0_seq1.mrna1;Target=comp159784_c0_seq1 1457 1670 -
Chr1	stalkie_big_nohaplotig	exon	145827621	145827730	100	+	.	Parent=comp159784_c0_seq1.mrna1;Target=comp159784_c0_seq1 1347 1456 -
Chr1	stalkie_big_nohaplotig	exon	145827861	145828159	99	+	.	Parent=comp159784_c0_seq1.mrna1;Target=comp159784_c0_seq1 1048 1346 -
Chr1	stalkie_big_nohaplotig	exon	145828215	145828419	100	+	.	Parent=comp159784_c0_seq1.mrna1;Target=comp159784_c0_seq1 843 1047 -
Chr1	stalkie_big_nohaplotig	exon	145828497	145829339	99	+	.	Parent=comp159784_c0_seq1.mrna1;Target=comp159784_c0_seq1 1 842 -
Chr1	stalkie_big_nohaplotig	CDS	145824546	145824654	.	+	0	Parent=comp159784_c0_seq1.mrna1;Target=comp159784_c0_seq1 1713 1821 .
Chr1	stalkie_big_nohaplotig	CDS	145826726	145826767	.	+	2	Parent=comp159784_c0_seq1.mrna1;Target=comp159784_c0_seq1 1671 1712 .
Chr1	stalkie_big_nohaplotig	CDS	145827249	145827462	.	+	2	Parent=comp159784_c0_seq1.mrna1;Target=comp159784_c0_seq1 1457 1670 .
Chr1	stalkie_big_nohaplotig	CDS	145827621	145827730	.	+	1	Parent=comp159784_c0_seq1.mrna1;Target=comp159784_c0_seq1 1347 1456 .
Chr1	stalkie_big_nohaplotig	CDS	145827861	145828159	.	+	2	Parent=comp159784_c0_seq1.mrna1;Target=comp159784_c0_seq1 1048 1346 .
Chr1	stalkie_big_nohaplotig	CDS	145828215	145828235	.	+	0	Parent=comp159784_c0_seq1.mrna1;Target=comp159784_c0_seq1 1027 1047 .
Chr1	stalkie_big_nohaplotig	mRNA	145824498	145828834	.	+	.	ID=FBgn0030925.4.mrna1;geneID=FBgn0030925.4.path1;Name=FBgn0030925.4;Dir=sensecoverage=100.0;identity=99.8;matches=1341;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012164
Chr1	stalkie_big_nohaplotig	exon	145824498	145824654	100	+	.	Parent=FBgn0030925.4.mrna1;Target=FBgn0030925.4 1 157 +
Chr1	stalkie_big_nohaplotig	exon	145826726	145826767	100	+	.	Parent=FBgn0030925.4.mrna1;Target=FBgn0030925.4 158 199 +
Chr1	stalkie_big_nohaplotig	exon	145827249	145827462	99	+	.	Parent=FBgn0030925.4.mrna1;Target=FBgn0030925.4 200 413 +
Chr1	stalkie_big_nohaplotig	exon	145827621	145827730	100	+	.	Parent=FBgn0030925.4.mrna1;Target=FBgn0030925.4 414 523 +
Chr1	stalkie_big_nohaplotig	exon	145827861	145828159	99	+	.	Parent=FBgn0030925.4.mrna1;Target=FBgn0030925.4 524 822 +
Chr1	stalkie_big_nohaplotig	exon	145828236	145828419	100	+	.	Parent=FBgn0030925.4.mrna1;Target=FBgn0030925.4 823 1006 +
Chr1	stalkie_big_nohaplotig	exon	145828497	145828834	100	+	.	Parent=FBgn0030925.4.mrna1;Target=FBgn0030925.4 1007 1344 +
Chr1	stalkie_big_nohaplotig	CDS	145824498	145824654	.	+	0	Parent=FBgn0030925.4.mrna1;Target=FBgn0030925.4 1 157 +
Chr1	stalkie_big_nohaplotig	CDS	145826726	145826767	.	+	2	Parent=FBgn0030925.4.mrna1;Target=FBgn0030925.4 158 199 +
Chr1	stalkie_big_nohaplotig	CDS	145827249	145827462	.	+	2	Parent=FBgn0030925.4.mrna1;Target=FBgn0030925.4 200 413 +
Chr1	stalkie_big_nohaplotig	CDS	145827621	145827730	.	+	1	Parent=FBgn0030925.4.mrna1;Target=FBgn0030925.4 414 523 +
Chr1	stalkie_big_nohaplotig	CDS	145827861	145828159	.	+	2	Parent=FBgn0030925.4.mrna1;Target=FBgn0030925.4 524 822 +
Chr1	stalkie_big_nohaplotig	CDS	145828236	145828419	.	+	0	Parent=FBgn0030925.4.mrna1;Target=FBgn0030925.4 823 1006 +
Chr1	stalkie_big_nohaplotig	CDS	145828497	145828834	.	+	2	Parent=FBgn0030925.4.mrna1;Target=FBgn0030925.4 1007 1344 +
Chr1	gffcl	locus	145842568	145861108	.	-	.	ID=RLOC_00012165;geneIDs=FBgn0029830.1.path2;transcripts=FBgn0029830.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	145842568	145861108	.	-	.	ID=FBgn0029830.1.mrna2;geneID=FBgn0029830.1.path2;Name=FBgn0029830.1;Dir=sensecoverage=93.1;identity=99.7;matches=2893;mismatches=10;indels=0;unknowns=0;locus=RLOC_00012165
Chr1	stalkie_big_nohaplotig	exon	145842568	145842669	100	-	.	Parent=FBgn0029830.1.mrna2;Target=FBgn0029830.1 3016 3117 +
Chr1	stalkie_big_nohaplotig	exon	145842734	145843191	99	-	.	Parent=FBgn0029830.1.mrna2;Target=FBgn0029830.1 2558 3015 +
Chr1	stalkie_big_nohaplotig	exon	145843261	145843466	99	-	.	Parent=FBgn0029830.1.mrna2;Target=FBgn0029830.1 2352 2557 +
Chr1	stalkie_big_nohaplotig	exon	145843793	145844954	99	-	.	Parent=FBgn0029830.1.mrna2;Target=FBgn0029830.1 1190 2351 +
Chr1	stalkie_big_nohaplotig	exon	145849832	145849995	100	-	.	Parent=FBgn0029830.1.mrna2;Target=FBgn0029830.1 1026 1189 +
Chr1	stalkie_big_nohaplotig	exon	145850920	145851209	100	-	.	Parent=FBgn0029830.1.mrna2;Target=FBgn0029830.1 736 1025 +
Chr1	stalkie_big_nohaplotig	exon	145851388	145851578	99	-	.	Parent=FBgn0029830.1.mrna2;Target=FBgn0029830.1 545 735 +
Chr1	stalkie_big_nohaplotig	exon	145853719	145853925	99	-	.	Parent=FBgn0029830.1.mrna2;Target=FBgn0029830.1 338 544 +
Chr1	stalkie_big_nohaplotig	exon	145860986	145861108	100	-	.	Parent=FBgn0029830.1.mrna2;Target=FBgn0029830.1 215 337 +
Chr1	stalkie_big_nohaplotig	CDS	145851000	145851209	.	-	2	Parent=FBgn0029830.1.mrna2;Target=FBgn0029830.1 736 945 +
Chr1	stalkie_big_nohaplotig	CDS	145851388	145851498	.	-	2	Parent=FBgn0029830.1.mrna2;Target=FBgn0029830.1 625 735 +
Chr1	gffcl	locus	145863159	147939444	.	.	.	ID=RLOC_00012166;geneIDs=FBgn0030914.1.path1,comp153520_c0_seq1.path1,comp163060_c0_seq1.path1;transcripts=comp163060_c0_seq1.mrna1,comp153520_c0_seq1.mrna1,FBgn0030914.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145863159	147939444	.	+	.	ID=comp163060_c0_seq1.mrna1;geneID=comp163060_c0_seq1.path1;Name=comp163060_c0_seq1;Dir=antisensecoverage=69.2;identity=95.7;matches=1748;mismatches=55;indels=23;unknowns=0;Target=comp163060_c0_seq1 1104 1262 .;locus=RLOC_00012166
Chr1	stalkie_big_nohaplotig	exon	145863159	145863166	100	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1827 1834 -
Chr1	stalkie_big_nohaplotig	exon	145868861	145868911	65	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1753 1812 -
Chr1	stalkie_big_nohaplotig	exon	145872471	145872476	100	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1747 1752 -
Chr1	stalkie_big_nohaplotig	exon	145874124	145874138	93	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1732 1746 -
Chr1	stalkie_big_nohaplotig	exon	145876071	145876075	100	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1727 1731 -
Chr1	stalkie_big_nohaplotig	exon	145877381	145877396	81	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1711 1726 -
Chr1	stalkie_big_nohaplotig	exon	145883920	145883923	100	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1707 1710 -
Chr1	stalkie_big_nohaplotig	exon	145891513	145891565	54	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1655 1706 -
Chr1	stalkie_big_nohaplotig	exon	145905197	145905198	100	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1653 1654 -
Chr1	stalkie_big_nohaplotig	exon	145912672	145912677	100	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1647 1652 -
Chr1	stalkie_big_nohaplotig	exon	145914101	145914107	100	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1640 1646 -
Chr1	stalkie_big_nohaplotig	exon	145937836	145937839	100	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1636 1639 -
Chr1	stalkie_big_nohaplotig	exon	145944011	145944015	100	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1631 1635 -
Chr1	stalkie_big_nohaplotig	exon	145946644	145946645	100	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1629 1630 -
Chr1	stalkie_big_nohaplotig	exon	145952022	145952023	100	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1627 1628 -
Chr1	stalkie_big_nohaplotig	exon	145959974	145959976	100	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1624 1626 -
Chr1	stalkie_big_nohaplotig	exon	145960130	145960133	100	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1620 1623 -
Chr1	stalkie_big_nohaplotig	exon	145960966	145960969	100	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1616 1619 -
Chr1	stalkie_big_nohaplotig	exon	145972381	145972386	100	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1610 1615 -
Chr1	stalkie_big_nohaplotig	exon	145990188	145990195	100	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1602 1609 -
Chr1	stalkie_big_nohaplotig	exon	145991349	145991368	68	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1580 1601 -
Chr1	stalkie_big_nohaplotig	exon	145991635	145991653	73	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1566 1579 -
Chr1	stalkie_big_nohaplotig	exon	147102811	147102814	100	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 1562 1565 -
Chr1	stalkie_big_nohaplotig	exon	147910801	147911969	98	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 389 1561 -
Chr1	stalkie_big_nohaplotig	exon	147937901	147937935	100	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 354 388 -
Chr1	stalkie_big_nohaplotig	exon	147939093	147939444	98	+	.	Parent=comp163060_c0_seq1.mrna1;Target=comp163060_c0_seq1 4 353 -
Chr1	stalkie_big_nohaplotig	CDS	147911096	147911254	.	+	0	Parent=comp163060_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145891560	145892048	.	-	.	ID=comp153520_c0_seq1.mrna1;geneID=comp153520_c0_seq1.path1;Name=comp153520_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=484;mismatches=5;indels=0;unknowns=0;Target=comp153520_c0_seq1 489 1 .;CDS_Target=comp153520_c0_seq1 334 275 .;locus=RLOC_00012166
Chr1	stalkie_big_nohaplotig	exon	145891560	145892048	98	-	.	Parent=comp153520_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145891715	145891774	.	-	0	Parent=comp153520_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145903181	145905579	.	+	.	ID=FBgn0030914.1.mrna1;geneID=FBgn0030914.1.path1;Name=FBgn0030914.1;Dir=sensecoverage=100.0;identity=99.2;matches=1425;mismatches=12;indels=0;unknowns=0;locus=RLOC_00012166
Chr1	stalkie_big_nohaplotig	exon	145903181	145903351	100	+	.	Parent=FBgn0030914.1.mrna1;Target=FBgn0030914.1 1 171 +
Chr1	stalkie_big_nohaplotig	exon	145903416	145903567	98	+	.	Parent=FBgn0030914.1.mrna1;Target=FBgn0030914.1 172 323 +
Chr1	stalkie_big_nohaplotig	exon	145903649	145903916	100	+	.	Parent=FBgn0030914.1.mrna1;Target=FBgn0030914.1 324 591 +
Chr1	stalkie_big_nohaplotig	exon	145903998	145904143	97	+	.	Parent=FBgn0030914.1.mrna1;Target=FBgn0030914.1 592 737 +
Chr1	stalkie_big_nohaplotig	exon	145904325	145904662	98	+	.	Parent=FBgn0030914.1.mrna1;Target=FBgn0030914.1 738 1075 +
Chr1	stalkie_big_nohaplotig	exon	145905155	145905360	99	+	.	Parent=FBgn0030914.1.mrna1;Target=FBgn0030914.1 1076 1281 +
Chr1	stalkie_big_nohaplotig	exon	145905424	145905579	100	+	.	Parent=FBgn0030914.1.mrna1;Target=FBgn0030914.1 1282 1437 +
Chr1	stalkie_big_nohaplotig	CDS	145903181	145903351	.	+	0	Parent=FBgn0030914.1.mrna1;Target=FBgn0030914.1 1 171 +
Chr1	stalkie_big_nohaplotig	CDS	145903416	145903567	.	+	0	Parent=FBgn0030914.1.mrna1;Target=FBgn0030914.1 172 323 +
Chr1	stalkie_big_nohaplotig	CDS	145903649	145903916	.	+	1	Parent=FBgn0030914.1.mrna1;Target=FBgn0030914.1 324 591 +
Chr1	stalkie_big_nohaplotig	CDS	145903998	145904143	.	+	0	Parent=FBgn0030914.1.mrna1;Target=FBgn0030914.1 592 737 +
Chr1	stalkie_big_nohaplotig	CDS	145904325	145904662	.	+	1	Parent=FBgn0030914.1.mrna1;Target=FBgn0030914.1 738 1075 +
Chr1	stalkie_big_nohaplotig	CDS	145905155	145905360	.	+	2	Parent=FBgn0030914.1.mrna1;Target=FBgn0030914.1 1076 1281 +
Chr1	stalkie_big_nohaplotig	CDS	145905424	145905579	.	+	0	Parent=FBgn0030914.1.mrna1;Target=FBgn0030914.1 1282 1437 +
Chr1	gffcl	locus	145881808	145893938	.	.	.	ID=RLOC_00012167;geneIDs=FBgn0000163.1.path1,comp147037_c0_seq1.path1;transcripts=FBgn0000163.1.mrna1,comp147037_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145881808	145893938	.	+	.	ID=FBgn0000163.1.mrna1;geneID=FBgn0000163.1.path1;Name=FBgn0000163.1;Dir=sensecoverage=100.0;identity=99.2;matches=4382;mismatches=34;indels=0;unknowns=0;locus=RLOC_00012167
Chr1	stalkie_big_nohaplotig	exon	145881808	145881996	100	+	.	Parent=FBgn0000163.1.mrna1;Target=FBgn0000163.1 1 189 +
Chr1	stalkie_big_nohaplotig	exon	145885780	145887252	98	+	.	Parent=FBgn0000163.1.mrna1;Target=FBgn0000163.1 190 1662 +
Chr1	stalkie_big_nohaplotig	exon	145887310	145887534	99	+	.	Parent=FBgn0000163.1.mrna1;Target=FBgn0000163.1 1663 1887 +
Chr1	stalkie_big_nohaplotig	exon	145887604	145888133	98	+	.	Parent=FBgn0000163.1.mrna1;Target=FBgn0000163.1 1888 2417 +
Chr1	stalkie_big_nohaplotig	exon	145888235	145888510	99	+	.	Parent=FBgn0000163.1.mrna1;Target=FBgn0000163.1 2418 2693 +
Chr1	stalkie_big_nohaplotig	exon	145888573	145889180	99	+	.	Parent=FBgn0000163.1.mrna1;Target=FBgn0000163.1 2694 3301 +
Chr1	stalkie_big_nohaplotig	exon	145890066	145890564	98	+	.	Parent=FBgn0000163.1.mrna1;Target=FBgn0000163.1 3302 3800 +
Chr1	stalkie_big_nohaplotig	exon	145891176	145891274	100	+	.	Parent=FBgn0000163.1.mrna1;Target=FBgn0000163.1 3801 3899 +
Chr1	stalkie_big_nohaplotig	exon	145893422	145893938	99	+	.	Parent=FBgn0000163.1.mrna1;Target=FBgn0000163.1 3900 4416 +
Chr1	stalkie_big_nohaplotig	CDS	145881808	145881996	.	+	0	Parent=FBgn0000163.1.mrna1;Target=FBgn0000163.1 1 189 +
Chr1	stalkie_big_nohaplotig	CDS	145885780	145887252	.	+	0	Parent=FBgn0000163.1.mrna1;Target=FBgn0000163.1 190 1662 +
Chr1	stalkie_big_nohaplotig	CDS	145887310	145887534	.	+	0	Parent=FBgn0000163.1.mrna1;Target=FBgn0000163.1 1663 1887 +
Chr1	stalkie_big_nohaplotig	CDS	145887604	145888133	.	+	0	Parent=FBgn0000163.1.mrna1;Target=FBgn0000163.1 1888 2417 +
Chr1	stalkie_big_nohaplotig	CDS	145888235	145888510	.	+	1	Parent=FBgn0000163.1.mrna1;Target=FBgn0000163.1 2418 2693 +
Chr1	stalkie_big_nohaplotig	CDS	145888573	145889180	.	+	1	Parent=FBgn0000163.1.mrna1;Target=FBgn0000163.1 2694 3301 +
Chr1	stalkie_big_nohaplotig	CDS	145890066	145890564	.	+	2	Parent=FBgn0000163.1.mrna1;Target=FBgn0000163.1 3302 3800 +
Chr1	stalkie_big_nohaplotig	CDS	145891176	145891274	.	+	1	Parent=FBgn0000163.1.mrna1;Target=FBgn0000163.1 3801 3899 +
Chr1	stalkie_big_nohaplotig	CDS	145893422	145893938	.	+	1	Parent=FBgn0000163.1.mrna1;Target=FBgn0000163.1 3900 4416 +
Chr1	stalkie_big_nohaplotig	mRNA	145890615	145891178	.	-	.	ID=comp147037_c0_seq1.mrna1;geneID=comp147037_c0_seq1.path1;Name=comp147037_c0_seq1;Dir=indeterminatecoverage=72.1;identity=100.0;matches=564;mismatches=0;indels=0;unknowns=0;Target=comp147037_c0_seq1 564 1 .;CDS_Target=comp147037_c0_seq1 144 1 .;locus=RLOC_00012167
Chr1	stalkie_big_nohaplotig	exon	145890615	145891178	100	-	.	Parent=comp147037_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145891035	145891178	.	-	0	Parent=comp147037_c0_seq1.mrna1
Chr1	gffcl	locus	145892290	145893204	.	+	.	ID=RLOC_00012168;geneIDs=comp160380_c0_seq1.path1;transcripts=comp160380_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145892290	145893204	.	+	.	ID=comp160380_c0_seq1.mrna1;geneID=comp160380_c0_seq1.path1;Name=comp160380_c0_seq1;Dir=indeterminatecoverage=100.0;identity=88.7;matches=891;mismatches=21;indels=92;unknowns=0;Target=comp160380_c0_seq1 1001 1 .;CDS_Target=comp160380_c0_seq1 801 688 .;locus=RLOC_00012168
Chr1	stalkie_big_nohaplotig	exon	145892290	145893204	88	+	.	Parent=comp160380_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145892891	145893004	.	+	0	Parent=comp160380_c0_seq1.mrna1
Chr1	gffcl	locus	145897768	145900418	.	-	.	ID=RLOC_00012169;geneIDs=FBgn0052238.1.path1;transcripts=FBgn0052238.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145897768	145900418	.	-	.	ID=FBgn0052238.1.mrna1;geneID=FBgn0052238.1.path1;Name=FBgn0052238.1;Dir=sensecoverage=100.0;identity=99.7;matches=1325;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012169
Chr1	stalkie_big_nohaplotig	exon	145897768	145897906	100	-	.	Parent=FBgn0052238.1.mrna1;Target=FBgn0052238.1 1191 1329 +
Chr1	stalkie_big_nohaplotig	exon	145897979	145898319	99	-	.	Parent=FBgn0052238.1.mrna1;Target=FBgn0052238.1 850 1190 +
Chr1	stalkie_big_nohaplotig	exon	145898380	145898581	99	-	.	Parent=FBgn0052238.1.mrna1;Target=FBgn0052238.1 648 849 +
Chr1	stalkie_big_nohaplotig	exon	145898644	145898830	100	-	.	Parent=FBgn0052238.1.mrna1;Target=FBgn0052238.1 461 647 +
Chr1	stalkie_big_nohaplotig	exon	145899284	145899471	99	-	.	Parent=FBgn0052238.1.mrna1;Target=FBgn0052238.1 273 460 +
Chr1	stalkie_big_nohaplotig	exon	145900053	145900250	100	-	.	Parent=FBgn0052238.1.mrna1;Target=FBgn0052238.1 75 272 +
Chr1	stalkie_big_nohaplotig	exon	145900345	145900418	100	-	.	Parent=FBgn0052238.1.mrna1;Target=FBgn0052238.1 1 74 +
Chr1	stalkie_big_nohaplotig	CDS	145897768	145897906	.	-	1	Parent=FBgn0052238.1.mrna1;Target=FBgn0052238.1 1191 1329 +
Chr1	stalkie_big_nohaplotig	CDS	145897979	145898319	.	-	0	Parent=FBgn0052238.1.mrna1;Target=FBgn0052238.1 850 1190 +
Chr1	stalkie_big_nohaplotig	CDS	145898380	145898581	.	-	1	Parent=FBgn0052238.1.mrna1;Target=FBgn0052238.1 648 849 +
Chr1	stalkie_big_nohaplotig	CDS	145898644	145898830	.	-	2	Parent=FBgn0052238.1.mrna1;Target=FBgn0052238.1 461 647 +
Chr1	stalkie_big_nohaplotig	CDS	145899284	145899471	.	-	1	Parent=FBgn0052238.1.mrna1;Target=FBgn0052238.1 273 460 +
Chr1	stalkie_big_nohaplotig	CDS	145900053	145900250	.	-	1	Parent=FBgn0052238.1.mrna1;Target=FBgn0052238.1 75 272 +
Chr1	stalkie_big_nohaplotig	CDS	145900345	145900418	.	-	0	Parent=FBgn0052238.1.mrna1;Target=FBgn0052238.1 1 74 +
Chr1	gffcl	locus	145910563	145910874	.	-	.	ID=RLOC_00012170;geneIDs=comp143957_c0_seq1.path1;transcripts=comp143957_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145910563	145910874	.	-	.	ID=comp143957_c0_seq1.mrna1;geneID=comp143957_c0_seq1.path1;Name=comp143957_c0_seq1;Dir=indeterminatecoverage=83.5;identity=92.0;matches=289;mismatches=23;indels=2;unknowns=0;Target=comp143957_c0_seq1 322 9 .;CDS_Target=comp143957_c0_seq1 207 10 .;locus=RLOC_00012170
Chr1	stalkie_big_nohaplotig	exon	145910563	145910874	92	-	.	Parent=comp143957_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145910678	145910873	.	-	0	Parent=comp143957_c0_seq1.mrna1
Chr1	gffcl	locus	145921886	146015368	.	-	.	ID=RLOC_00012171;geneIDs=FBgn0029821.1.path1;transcripts=FBgn0029821.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145921886	146015368	.	-	.	ID=FBgn0029821.1.mrna1;geneID=FBgn0029821.1.path1;Name=FBgn0029821.1;Dir=sensecoverage=84.2;identity=99.6;matches=1328;mismatches=6;indels=0;unknowns=0;locus=RLOC_00012171
Chr1	stalkie_big_nohaplotig	exon	145921886	145922006	97	-	.	Parent=FBgn0029821.1.mrna1;Target=FBgn0029821.1 1230 1350 +
Chr1	stalkie_big_nohaplotig	exon	145922080	145922150	100	-	.	Parent=FBgn0029821.1.mrna1;Target=FBgn0029821.1 1159 1229 +
Chr1	stalkie_big_nohaplotig	exon	145922211	145922391	99	-	.	Parent=FBgn0029821.1.mrna1;Target=FBgn0029821.1 978 1158 +
Chr1	stalkie_big_nohaplotig	exon	145922457	145922655	100	-	.	Parent=FBgn0029821.1.mrna1;Target=FBgn0029821.1 779 977 +
Chr1	stalkie_big_nohaplotig	exon	145922718	145922827	100	-	.	Parent=FBgn0029821.1.mrna1;Target=FBgn0029821.1 669 778 +
Chr1	stalkie_big_nohaplotig	exon	145922898	145922983	100	-	.	Parent=FBgn0029821.1.mrna1;Target=FBgn0029821.1 583 668 +
Chr1	stalkie_big_nohaplotig	exon	145923169	145923319	100	-	.	Parent=FBgn0029821.1.mrna1;Target=FBgn0029821.1 432 582 +
Chr1	stalkie_big_nohaplotig	exon	145923382	145923667	99	-	.	Parent=FBgn0029821.1.mrna1;Target=FBgn0029821.1 146 431 +
Chr1	stalkie_big_nohaplotig	exon	146013825	146013900	100	-	.	Parent=FBgn0029821.1.mrna1;Target=FBgn0029821.1 70 145 +
Chr1	stalkie_big_nohaplotig	exon	146015316	146015368	98	-	.	Parent=FBgn0029821.1.mrna1;Target=FBgn0029821.1 17 69 +
Chr1	stalkie_big_nohaplotig	CDS	145921886	145922006	.	-	1	Parent=FBgn0029821.1.mrna1;Target=FBgn0029821.1 1230 1350 +
Chr1	stalkie_big_nohaplotig	CDS	145922080	145922150	.	-	0	Parent=FBgn0029821.1.mrna1;Target=FBgn0029821.1 1159 1229 +
Chr1	stalkie_big_nohaplotig	CDS	145922211	145922391	.	-	1	Parent=FBgn0029821.1.mrna1;Target=FBgn0029821.1 978 1158 +
Chr1	stalkie_big_nohaplotig	CDS	145922457	145922655	.	-	2	Parent=FBgn0029821.1.mrna1;Target=FBgn0029821.1 779 977 +
Chr1	stalkie_big_nohaplotig	CDS	145922718	145922827	.	-	1	Parent=FBgn0029821.1.mrna1;Target=FBgn0029821.1 669 778 +
Chr1	stalkie_big_nohaplotig	CDS	145922898	145922983	.	-	0	Parent=FBgn0029821.1.mrna1;Target=FBgn0029821.1 583 668 +
Chr1	stalkie_big_nohaplotig	CDS	145923169	145923319	.	-	1	Parent=FBgn0029821.1.mrna1;Target=FBgn0029821.1 432 582 +
Chr1	stalkie_big_nohaplotig	CDS	145923382	145923667	.	-	2	Parent=FBgn0029821.1.mrna1;Target=FBgn0029821.1 146 431 +
Chr1	stalkie_big_nohaplotig	CDS	146013825	146013900	.	-	0	Parent=FBgn0029821.1.mrna1;Target=FBgn0029821.1 70 145 +
Chr1	stalkie_big_nohaplotig	CDS	146015316	146015366	.	-	0	Parent=FBgn0029821.1.mrna1;Target=FBgn0029821.1 19 69 +
Chr1	gffcl	locus	145927067	145932236	.	-	.	ID=RLOC_00012172;geneIDs=FBgn0029821.2.path1;transcripts=FBgn0029821.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145927067	145932236	.	-	.	ID=FBgn0029821.2.mrna1;geneID=FBgn0029821.2.path1;Name=FBgn0029821.2;Dir=sensecoverage=100.0;identity=98.5;matches=1436;mismatches=21;indels=1;unknowns=0;Target=FBgn0029821.2 3 17 +;locus=RLOC_00012172
Chr1	stalkie_big_nohaplotig	exon	145927067	145927277	98	-	.	Parent=FBgn0029821.2.mrna1;Target=FBgn0029821.2 1248 1458 +
Chr1	stalkie_big_nohaplotig	exon	145927344	145927469	99	-	.	Parent=FBgn0029821.2.mrna1;Target=FBgn0029821.2 1122 1247 +
Chr1	stalkie_big_nohaplotig	exon	145927523	145927593	98	-	.	Parent=FBgn0029821.2.mrna1;Target=FBgn0029821.2 1051 1121 +
Chr1	stalkie_big_nohaplotig	exon	145927684	145927861	97	-	.	Parent=FBgn0029821.2.mrna1;Target=FBgn0029821.2 873 1050 +
Chr1	stalkie_big_nohaplotig	exon	145927935	145928124	97	-	.	Parent=FBgn0029821.2.mrna1;Target=FBgn0029821.2 683 872 +
Chr1	stalkie_big_nohaplotig	exon	145928188	145928297	99	-	.	Parent=FBgn0029821.2.mrna1;Target=FBgn0029821.2 573 682 +
Chr1	stalkie_big_nohaplotig	exon	145928375	145928460	100	-	.	Parent=FBgn0029821.2.mrna1;Target=FBgn0029821.2 487 572 +
Chr1	stalkie_big_nohaplotig	exon	145929349	145929499	98	-	.	Parent=FBgn0029821.2.mrna1;Target=FBgn0029821.2 336 486 +
Chr1	stalkie_big_nohaplotig	exon	145929554	145929839	99	-	.	Parent=FBgn0029821.2.mrna1;Target=FBgn0029821.2 50 335 +
Chr1	stalkie_big_nohaplotig	exon	145932189	145932236	95	-	.	Parent=FBgn0029821.2.mrna1;Target=FBgn0029821.2 1 49 +
Chr1	stalkie_big_nohaplotig	CDS	145932221	145932234	.	-	0	Parent=FBgn0029821.2.mrna1
Chr1	gffcl	locus	145933383	145935627	.	-	.	ID=RLOC_00012173;geneIDs=comp163769_c0_seq1.path1;transcripts=comp163769_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145933383	145935627	.	-	.	ID=comp163769_c0_seq1.mrna1;geneID=comp163769_c0_seq1.path1;Name=comp163769_c0_seq1;Dir=indeterminatecoverage=99.3;identity=93.5;matches=2153;mismatches=67;indels=83;unknowns=0;Target=comp163769_c0_seq1 2278 1 .;CDS_Target=comp163769_c0_seq1 2237 1128 .;locus=RLOC_00012173
Chr1	stalkie_big_nohaplotig	exon	145933383	145935627	93	-	.	Parent=comp163769_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	145933424	145934476	.	-	0	Parent=comp163769_c0_seq1.mrna1
Chr1	gffcl	locus	145942357	145945877	.	-	.	ID=RLOC_00012174;geneIDs=FBgn0029826.2.path1;transcripts=FBgn0029826.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145942357	145945877	.	-	.	ID=FBgn0029826.2.mrna1;geneID=FBgn0029826.2.path1;Name=FBgn0029826.2;Dir=sensecoverage=100.0;identity=99.6;matches=1079;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012174
Chr1	stalkie_big_nohaplotig	exon	145942357	145942752	99	-	.	Parent=FBgn0029826.2.mrna1;Target=FBgn0029826.2 688 1083 +
Chr1	stalkie_big_nohaplotig	exon	145942815	145943106	100	-	.	Parent=FBgn0029826.2.mrna1;Target=FBgn0029826.2 396 687 +
Chr1	stalkie_big_nohaplotig	exon	145943181	145943376	99	-	.	Parent=FBgn0029826.2.mrna1;Target=FBgn0029826.2 200 395 +
Chr1	stalkie_big_nohaplotig	exon	145945679	145945877	99	-	.	Parent=FBgn0029826.2.mrna1;Target=FBgn0029826.2 1 199 +
Chr1	stalkie_big_nohaplotig	CDS	145942357	145942752	.	-	0	Parent=FBgn0029826.2.mrna1;Target=FBgn0029826.2 688 1083 +
Chr1	stalkie_big_nohaplotig	CDS	145942815	145943106	.	-	1	Parent=FBgn0029826.2.mrna1;Target=FBgn0029826.2 396 687 +
Chr1	stalkie_big_nohaplotig	CDS	145943181	145943376	.	-	2	Parent=FBgn0029826.2.mrna1;Target=FBgn0029826.2 200 395 +
Chr1	stalkie_big_nohaplotig	CDS	145945679	145945877	.	-	0	Parent=FBgn0029826.2.mrna1;Target=FBgn0029826.2 1 199 +
Chr1	gffcl	locus	145947140	145949332	.	-	.	ID=RLOC_00012175;geneIDs=ORF1071.path1;transcripts=ORF1071.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145947140	145949332	.	-	.	ID=ORF1071.mrna1;geneID=ORF1071.path1;Name=ORF1071;Dir=sensecoverage=100.0;identity=99.2;matches=1241;mismatches=10;indels=0;unknowns=0;locus=RLOC_00012175
Chr1	stalkie_big_nohaplotig	exon	145947140	145947662	99	-	.	Parent=ORF1071.mrna1;Target=ORF1071 729 1251 +
Chr1	stalkie_big_nohaplotig	exon	145947854	145948106	98	-	.	Parent=ORF1071.mrna1;Target=ORF1071 476 728 +
Chr1	stalkie_big_nohaplotig	exon	145948725	145948863	99	-	.	Parent=ORF1071.mrna1;Target=ORF1071 337 475 +
Chr1	stalkie_big_nohaplotig	exon	145948922	145949104	99	-	.	Parent=ORF1071.mrna1;Target=ORF1071 154 336 +
Chr1	stalkie_big_nohaplotig	exon	145949180	145949332	100	-	.	Parent=ORF1071.mrna1;Target=ORF1071 1 153 +
Chr1	stalkie_big_nohaplotig	CDS	145947140	145947662	.	-	1	Parent=ORF1071.mrna1;Target=ORF1071 729 1251 +
Chr1	stalkie_big_nohaplotig	CDS	145947854	145948106	.	-	2	Parent=ORF1071.mrna1;Target=ORF1071 476 728 +
Chr1	stalkie_big_nohaplotig	CDS	145948725	145948863	.	-	0	Parent=ORF1071.mrna1;Target=ORF1071 337 475 +
Chr1	stalkie_big_nohaplotig	CDS	145948922	145949104	.	-	0	Parent=ORF1071.mrna1;Target=ORF1071 154 336 +
Chr1	stalkie_big_nohaplotig	CDS	145949180	145949332	.	-	0	Parent=ORF1071.mrna1;Target=ORF1071 1 153 +
Chr1	gffcl	locus	145952085	145955296	.	-	.	ID=RLOC_00012176;geneIDs=FBgn0029824.1.path1;transcripts=FBgn0029824.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145952085	145955296	.	-	.	ID=FBgn0029824.1.mrna1;geneID=FBgn0029824.1.path1;Name=FBgn0029824.1;Dir=sensecoverage=94.3;identity=99.6;matches=1997;mismatches=8;indels=0;unknowns=0;locus=RLOC_00012176
Chr1	stalkie_big_nohaplotig	exon	145952085	145952140	100	-	.	Parent=FBgn0029824.1.mrna1;Target=FBgn0029824.1 2072 2127 +
Chr1	stalkie_big_nohaplotig	exon	145952207	145952319	100	-	.	Parent=FBgn0029824.1.mrna1;Target=FBgn0029824.1 1959 2071 +
Chr1	stalkie_big_nohaplotig	exon	145952388	145952512	100	-	.	Parent=FBgn0029824.1.mrna1;Target=FBgn0029824.1 1834 1958 +
Chr1	stalkie_big_nohaplotig	exon	145953416	145954460	99	-	.	Parent=FBgn0029824.1.mrna1;Target=FBgn0029824.1 789 1833 +
Chr1	stalkie_big_nohaplotig	exon	145954529	145954896	100	-	.	Parent=FBgn0029824.1.mrna1;Target=FBgn0029824.1 421 788 +
Chr1	stalkie_big_nohaplotig	exon	145954999	145955296	98	-	.	Parent=FBgn0029824.1.mrna1;Target=FBgn0029824.1 123 420 +
Chr1	stalkie_big_nohaplotig	CDS	145952085	145952140	.	-	2	Parent=FBgn0029824.1.mrna1;Target=FBgn0029824.1 2072 2127 +
Chr1	stalkie_big_nohaplotig	CDS	145952207	145952319	.	-	1	Parent=FBgn0029824.1.mrna1;Target=FBgn0029824.1 1959 2071 +
Chr1	stalkie_big_nohaplotig	CDS	145952388	145952512	.	-	0	Parent=FBgn0029824.1.mrna1;Target=FBgn0029824.1 1834 1958 +
Chr1	stalkie_big_nohaplotig	CDS	145953416	145954460	.	-	1	Parent=FBgn0029824.1.mrna1;Target=FBgn0029824.1 789 1833 +
Chr1	stalkie_big_nohaplotig	CDS	145954529	145954896	.	-	0	Parent=FBgn0029824.1.mrna1;Target=FBgn0029824.1 421 788 +
Chr1	stalkie_big_nohaplotig	CDS	145954999	145955295	.	-	0	Parent=FBgn0029824.1.mrna1;Target=FBgn0029824.1 124 420 +
Chr1	gffcl	locus	145986396	145987923	.	+	.	ID=RLOC_00012177;geneIDs=comp145296_c0_seq1.path1;transcripts=comp145296_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145986396	145987923	.	+	.	ID=comp145296_c0_seq1.mrna1;geneID=comp145296_c0_seq1.path1;Name=comp145296_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.4;matches=1340;mismatches=47;indels=18;unknowns=0;Target=comp145296_c0_seq1 643 593 .;locus=RLOC_00012177
Chr1	stalkie_big_nohaplotig	exon	145986396	145987531	95	+	.	Parent=comp145296_c0_seq1.mrna1;Target=comp145296_c0_seq1 1151 1 .
Chr1	stalkie_big_nohaplotig	exon	145987587	145987602	100	+	.	Parent=comp145296_c0_seq1.mrna1;Target=comp145296_c0_seq1 1167 1152 .
Chr1	stalkie_big_nohaplotig	exon	145987629	145987815	96	+	.	Parent=comp145296_c0_seq1.mrna1;Target=comp145296_c0_seq1 1355 1168 .
Chr1	stalkie_big_nohaplotig	exon	145987875	145987923	91	+	.	Parent=comp145296_c0_seq1.mrna1;Target=comp145296_c0_seq1 1404 1356 .
Chr1	stalkie_big_nohaplotig	CDS	145986988	145987038	.	+	0	Parent=comp145296_c0_seq1.mrna1
Chr1	gffcl	locus	145987813	145991206	.	-	.	ID=RLOC_00012178;geneIDs=ORF2037.path1,comp159635_c2_seq1.path1;transcripts=comp159635_c2_seq1.mrna1,ORF2037.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145987813	145989453	.	-	.	ID=comp159635_c2_seq1.mrna1;geneID=comp159635_c2_seq1.path1;Name=comp159635_c2_seq1;Dir=antisensecoverage=97.9;identity=98.2;matches=1367;mismatches=24;indels=1;unknowns=0;locus=RLOC_00012178
Chr1	stalkie_big_nohaplotig	exon	145987813	145988161	100	-	.	Parent=comp159635_c2_seq1.mrna1;Target=comp159635_c2_seq1 14 362 -
Chr1	stalkie_big_nohaplotig	exon	145988227	145988499	100	-	.	Parent=comp159635_c2_seq1.mrna1;Target=comp159635_c2_seq1 363 635 -
Chr1	stalkie_big_nohaplotig	exon	145988568	145988759	98	-	.	Parent=comp159635_c2_seq1.mrna1;Target=comp159635_c2_seq1 636 827 -
Chr1	stalkie_big_nohaplotig	exon	145988818	145988994	98	-	.	Parent=comp159635_c2_seq1.mrna1;Target=comp159635_c2_seq1 828 1004 -
Chr1	stalkie_big_nohaplotig	exon	145989053	145989453	95	-	.	Parent=comp159635_c2_seq1.mrna1;Target=comp159635_c2_seq1 1005 1404 -
Chr1	stalkie_big_nohaplotig	CDS	145988084	145988161	.	-	0	Parent=comp159635_c2_seq1.mrna1;Target=comp159635_c2_seq1 285 362 .
Chr1	stalkie_big_nohaplotig	CDS	145988227	145988499	.	-	0	Parent=comp159635_c2_seq1.mrna1;Target=comp159635_c2_seq1 363 635 .
Chr1	stalkie_big_nohaplotig	CDS	145988568	145988759	.	-	0	Parent=comp159635_c2_seq1.mrna1;Target=comp159635_c2_seq1 636 827 .
Chr1	stalkie_big_nohaplotig	CDS	145988818	145988994	.	-	0	Parent=comp159635_c2_seq1.mrna1;Target=comp159635_c2_seq1 828 1004 .
Chr1	stalkie_big_nohaplotig	CDS	145989053	145989214	.	-	0	Parent=comp159635_c2_seq1.mrna1;Target=comp159635_c2_seq1 1005 1166 .
Chr1	stalkie_big_nohaplotig	mRNA	145988087	145991206	.	-	.	ID=ORF2037.mrna1;geneID=ORF2037.path1;Name=ORF2037;Dir=sensecoverage=100.0;identity=99.1;matches=925;mismatches=8;indels=0;unknowns=0;locus=RLOC_00012178
Chr1	stalkie_big_nohaplotig	exon	145988087	145988161	100	-	.	Parent=ORF2037.mrna1;Target=ORF2037 859 933 +
Chr1	stalkie_big_nohaplotig	exon	145988227	145988499	100	-	.	Parent=ORF2037.mrna1;Target=ORF2037 586 858 +
Chr1	stalkie_big_nohaplotig	exon	145988568	145988759	98	-	.	Parent=ORF2037.mrna1;Target=ORF2037 394 585 +
Chr1	stalkie_big_nohaplotig	exon	145988818	145988994	98	-	.	Parent=ORF2037.mrna1;Target=ORF2037 217 393 +
Chr1	stalkie_big_nohaplotig	exon	145989053	145989200	98	-	.	Parent=ORF2037.mrna1;Target=ORF2037 69 216 +
Chr1	stalkie_big_nohaplotig	exon	145991139	145991206	98	-	.	Parent=ORF2037.mrna1;Target=ORF2037 1 68 +
Chr1	stalkie_big_nohaplotig	CDS	145988087	145988161	.	-	0	Parent=ORF2037.mrna1;Target=ORF2037 859 933 +
Chr1	stalkie_big_nohaplotig	CDS	145988227	145988499	.	-	0	Parent=ORF2037.mrna1;Target=ORF2037 586 858 +
Chr1	stalkie_big_nohaplotig	CDS	145988568	145988759	.	-	0	Parent=ORF2037.mrna1;Target=ORF2037 394 585 +
Chr1	stalkie_big_nohaplotig	CDS	145988818	145988994	.	-	0	Parent=ORF2037.mrna1;Target=ORF2037 217 393 +
Chr1	stalkie_big_nohaplotig	CDS	145989053	145989200	.	-	1	Parent=ORF2037.mrna1;Target=ORF2037 69 216 +
Chr1	stalkie_big_nohaplotig	CDS	145991139	145991206	.	-	0	Parent=ORF2037.mrna1;Target=ORF2037 1 68 +
Chr1	gffcl	locus	145990625	145997226	.	+	.	ID=RLOC_00012179;geneIDs=FBgn0029823.1.path1,comp153458_c0_seq1.path1;transcripts=FBgn0029823.1.mrna1,comp153458_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145990625	145997226	.	+	.	ID=FBgn0029823.1.mrna1;geneID=FBgn0029823.1.path1;Name=FBgn0029823.1;Dir=sensecoverage=100.0;identity=99.7;matches=1576;mismatches=5;indels=0;unknowns=0;locus=RLOC_00012179
Chr1	stalkie_big_nohaplotig	exon	145990625	145990801	100	+	.	Parent=FBgn0029823.1.mrna1;Target=FBgn0029823.1 1 177 +
Chr1	stalkie_big_nohaplotig	exon	145995377	145995579	99	+	.	Parent=FBgn0029823.1.mrna1;Target=FBgn0029823.1 178 380 +
Chr1	stalkie_big_nohaplotig	exon	145995667	145996325	99	+	.	Parent=FBgn0029823.1.mrna1;Target=FBgn0029823.1 381 1039 +
Chr1	stalkie_big_nohaplotig	exon	145996685	145997226	99	+	.	Parent=FBgn0029823.1.mrna1;Target=FBgn0029823.1 1040 1581 +
Chr1	stalkie_big_nohaplotig	CDS	145990625	145990801	.	+	0	Parent=FBgn0029823.1.mrna1;Target=FBgn0029823.1 1 177 +
Chr1	stalkie_big_nohaplotig	CDS	145995377	145995579	.	+	0	Parent=FBgn0029823.1.mrna1;Target=FBgn0029823.1 178 380 +
Chr1	stalkie_big_nohaplotig	CDS	145995667	145996325	.	+	1	Parent=FBgn0029823.1.mrna1;Target=FBgn0029823.1 381 1039 +
Chr1	stalkie_big_nohaplotig	CDS	145996685	145997226	.	+	2	Parent=FBgn0029823.1.mrna1;Target=FBgn0029823.1 1040 1581 +
Chr1	stalkie_big_nohaplotig	mRNA	145994676	145995400	.	+	.	ID=comp153458_c0_seq1.mrna1;geneID=comp153458_c0_seq1.path1;Name=comp153458_c0_seq1;Dir=antisensecoverage=97.5;identity=99.7;matches=653;mismatches=1;indels=1;unknowns=0;Target=comp153458_c0_seq1 505 654 .;locus=RLOC_00012179
Chr1	stalkie_big_nohaplotig	exon	145994676	145995305	99	+	.	Parent=comp153458_c0_seq1.mrna1;Target=comp153458_c0_seq1 25 655 -
Chr1	stalkie_big_nohaplotig	exon	145995377	145995400	100	+	.	Parent=comp153458_c0_seq1.mrna1;Target=comp153458_c0_seq1 1 24 -
Chr1	stalkie_big_nohaplotig	CDS	145994677	145994826	.	+	0	Parent=comp153458_c0_seq1.mrna1
Chr1	gffcl	locus	145999116	146008419	.	-	.	ID=RLOC_00012180;geneIDs=FBgn0029822.1.path1;transcripts=FBgn0029822.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	145999116	146008419	.	-	.	ID=FBgn0029822.1.mrna1;geneID=FBgn0029822.1.path1;Name=FBgn0029822.1;Dir=sensecoverage=100.0;identity=99.4;matches=1380;mismatches=9;indels=0;unknowns=0;locus=RLOC_00012180
Chr1	stalkie_big_nohaplotig	exon	145999116	145999333	99	-	.	Parent=FBgn0029822.1.mrna1;Target=FBgn0029822.1 1172 1389 +
Chr1	stalkie_big_nohaplotig	exon	146006253	146006363	99	-	.	Parent=FBgn0029822.1.mrna1;Target=FBgn0029822.1 1061 1171 +
Chr1	stalkie_big_nohaplotig	exon	146007204	146007443	99	-	.	Parent=FBgn0029822.1.mrna1;Target=FBgn0029822.1 821 1060 +
Chr1	stalkie_big_nohaplotig	exon	146007523	146008054	99	-	.	Parent=FBgn0029822.1.mrna1;Target=FBgn0029822.1 289 820 +
Chr1	stalkie_big_nohaplotig	exon	146008132	146008419	99	-	.	Parent=FBgn0029822.1.mrna1;Target=FBgn0029822.1 1 288 +
Chr1	stalkie_big_nohaplotig	CDS	145999116	145999333	.	-	2	Parent=FBgn0029822.1.mrna1;Target=FBgn0029822.1 1172 1389 +
Chr1	stalkie_big_nohaplotig	CDS	146006253	146006363	.	-	2	Parent=FBgn0029822.1.mrna1;Target=FBgn0029822.1 1061 1171 +
Chr1	stalkie_big_nohaplotig	CDS	146007204	146007443	.	-	2	Parent=FBgn0029822.1.mrna1;Target=FBgn0029822.1 821 1060 +
Chr1	stalkie_big_nohaplotig	CDS	146007523	146008054	.	-	0	Parent=FBgn0029822.1.mrna1;Target=FBgn0029822.1 289 820 +
Chr1	stalkie_big_nohaplotig	CDS	146008132	146008401	.	-	0	Parent=FBgn0029822.1.mrna1;Target=FBgn0029822.1 19 288 +
Chr1	gffcl	locus	146046138	146050029	.	-	.	ID=RLOC_00012181;geneIDs=FBgn0000042.1.path1,comp58179_c0_seq1.path1;transcripts=FBgn0000042.1.mrna1,comp58179_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146046138	146050029	.	-	.	ID=FBgn0000042.1.mrna1;geneID=FBgn0000042.1.path1;Name=FBgn0000042.1;Dir=sensecoverage=100.0;identity=99.7;matches=1163;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012181
Chr1	stalkie_big_nohaplotig	exon	146046138	146047270	99	-	.	Parent=FBgn0000042.1.mrna1;Target=FBgn0000042.1 35 1167 +
Chr1	stalkie_big_nohaplotig	exon	146049996	146050029	100	-	.	Parent=FBgn0000042.1.mrna1;Target=FBgn0000042.1 1 34 +
Chr1	stalkie_big_nohaplotig	CDS	146046138	146047270	.	-	2	Parent=FBgn0000042.1.mrna1;Target=FBgn0000042.1 35 1167 +
Chr1	stalkie_big_nohaplotig	CDS	146049996	146050029	.	-	0	Parent=FBgn0000042.1.mrna1;Target=FBgn0000042.1 1 34 +
Chr1	stalkie_big_nohaplotig	mRNA	146047247	146048330	.	-	.	ID=comp58179_c0_seq1.mrna1;geneID=comp58179_c0_seq1.path1;Name=comp58179_c0_seq1;Dir=sensecoverage=99.3;identity=91.6;matches=531;mismatches=4;indels=45;unknowns=0;Target=comp58179_c0_seq1 182 337 +;locus=RLOC_00012181
Chr1	stalkie_big_nohaplotig	exon	146047247	146047270	100	-	.	Parent=comp58179_c0_seq1.mrna1;Target=comp58179_c0_seq1 560 583 +
Chr1	stalkie_big_nohaplotig	exon	146047819	146048330	91	-	.	Parent=comp58179_c0_seq1.mrna1;Target=comp58179_c0_seq1 5 559 +
Chr1	stalkie_big_nohaplotig	CDS	146048029	146048184	.	-	0	Parent=comp58179_c0_seq1.mrna1
Chr1	gffcl	locus	146048700	146049934	.	-	.	ID=RLOC_00012182;geneIDs=comp152976_c0_seq1.path1;transcripts=comp152976_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146048700	146049934	.	-	.	ID=comp152976_c0_seq1.mrna1;geneID=comp152976_c0_seq1.path1;Name=comp152976_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1227;mismatches=8;indels=3;unknowns=0;Target=comp152976_c0_seq1 1238 1 .;CDS_Target=comp152976_c0_seq1 737 564 .;locus=RLOC_00012182
Chr1	stalkie_big_nohaplotig	exon	146048700	146049934	99	-	.	Parent=comp152976_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	146049198	146049371	.	-	0	Parent=comp152976_c0_seq1.mrna1
Chr1	gffcl	locus	146085243	146095369	.	+	.	ID=RLOC_00012183;geneIDs=FBgn0259166.path1,FBgn0259166.1.path1;transcripts=FBgn0259166.mrna1,FBgn0259166.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146085243	146088491	.	+	.	ID=FBgn0259166.mrna1;geneID=FBgn0259166.path1;Name=FBgn0259166;Dir=sensecoverage=100.0;identity=99.6;matches=562;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012183
Chr1	stalkie_big_nohaplotig	exon	146085243	146085369	100	+	.	Parent=FBgn0259166.mrna1;Target=FBgn0259166 1 127 +
Chr1	stalkie_big_nohaplotig	exon	146086713	146086871	100	+	.	Parent=FBgn0259166.mrna1;Target=FBgn0259166 128 286 +
Chr1	stalkie_big_nohaplotig	exon	146088144	146088205	100	+	.	Parent=FBgn0259166.mrna1;Target=FBgn0259166 287 348 +
Chr1	stalkie_big_nohaplotig	exon	146088276	146088491	99	+	.	Parent=FBgn0259166.mrna1;Target=FBgn0259166 349 564 +
Chr1	stalkie_big_nohaplotig	CDS	146085243	146085369	.	+	0	Parent=FBgn0259166.mrna1;Target=FBgn0259166 1 127 +
Chr1	stalkie_big_nohaplotig	CDS	146086713	146086871	.	+	2	Parent=FBgn0259166.mrna1;Target=FBgn0259166 128 286 +
Chr1	stalkie_big_nohaplotig	CDS	146088144	146088205	.	+	2	Parent=FBgn0259166.mrna1;Target=FBgn0259166 287 348 +
Chr1	stalkie_big_nohaplotig	CDS	146088276	146088491	.	+	0	Parent=FBgn0259166.mrna1;Target=FBgn0259166 349 564 +
Chr1	stalkie_big_nohaplotig	mRNA	146088453	146095369	.	+	.	ID=FBgn0259166.1.mrna1;geneID=FBgn0259166.1.path1;Name=FBgn0259166.1;Dir=sensecoverage=100.0;identity=99.3;matches=3401;mismatches=25;indels=0;unknowns=0;locus=RLOC_00012183
Chr1	stalkie_big_nohaplotig	exon	146088453	146088474	100	+	.	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 1 22 +
Chr1	stalkie_big_nohaplotig	exon	146089171	146089490	99	+	.	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 23 342 +
Chr1	stalkie_big_nohaplotig	exon	146089927	146090065	99	+	.	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 343 481 +
Chr1	stalkie_big_nohaplotig	exon	146090126	146090220	97	+	.	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 482 576 +
Chr1	stalkie_big_nohaplotig	exon	146090287	146090387	98	+	.	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 577 677 +
Chr1	stalkie_big_nohaplotig	exon	146090464	146090633	99	+	.	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 678 847 +
Chr1	stalkie_big_nohaplotig	exon	146090691	146090874	98	+	.	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 848 1031 +
Chr1	stalkie_big_nohaplotig	exon	146091832	146092132	99	+	.	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 1032 1332 +
Chr1	stalkie_big_nohaplotig	exon	146092191	146093184	99	+	.	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 1333 2326 +
Chr1	stalkie_big_nohaplotig	exon	146094034	146094227	100	+	.	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 2327 2520 +
Chr1	stalkie_big_nohaplotig	exon	146094297	146094511	98	+	.	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 2521 2735 +
Chr1	stalkie_big_nohaplotig	exon	146094573	146095133	98	+	.	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 2736 3296 +
Chr1	stalkie_big_nohaplotig	exon	146095240	146095369	100	+	.	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 3297 3426 +
Chr1	stalkie_big_nohaplotig	CDS	146088453	146088474	.	+	0	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 1 22 +
Chr1	stalkie_big_nohaplotig	CDS	146089171	146089490	.	+	2	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 23 342 +
Chr1	stalkie_big_nohaplotig	CDS	146089927	146090065	.	+	0	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 343 481 +
Chr1	stalkie_big_nohaplotig	CDS	146090126	146090220	.	+	2	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 482 576 +
Chr1	stalkie_big_nohaplotig	CDS	146090287	146090387	.	+	0	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 577 677 +
Chr1	stalkie_big_nohaplotig	CDS	146090464	146090633	.	+	1	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 678 847 +
Chr1	stalkie_big_nohaplotig	CDS	146090691	146090874	.	+	2	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 848 1031 +
Chr1	stalkie_big_nohaplotig	CDS	146091832	146092132	.	+	1	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 1032 1332 +
Chr1	stalkie_big_nohaplotig	CDS	146092191	146093184	.	+	0	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 1333 2326 +
Chr1	stalkie_big_nohaplotig	CDS	146094034	146094227	.	+	2	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 2327 2520 +
Chr1	stalkie_big_nohaplotig	CDS	146094297	146094511	.	+	0	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 2521 2735 +
Chr1	stalkie_big_nohaplotig	CDS	146094573	146095133	.	+	1	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 2736 3296 +
Chr1	stalkie_big_nohaplotig	CDS	146095240	146095369	.	+	1	Parent=FBgn0259166.1.mrna1;Target=FBgn0259166.1 3297 3426 +
Chr1	gffcl	locus	146097866	146099675	.	-	.	ID=RLOC_00012184;geneIDs=FBgn0030552.1.path1;transcripts=FBgn0030552.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146097866	146099675	.	-	.	ID=FBgn0030552.1.mrna1;geneID=FBgn0030552.1.path1;Name=FBgn0030552.1;Dir=sensecoverage=99.9;identity=98.8;matches=1244;mismatches=15;indels=0;unknowns=0;locus=RLOC_00012184
Chr1	stalkie_big_nohaplotig	exon	146097866	146098148	99	-	.	Parent=FBgn0030552.1.mrna1;Target=FBgn0030552.1 977 1259 +
Chr1	stalkie_big_nohaplotig	exon	146098212	146098510	98	-	.	Parent=FBgn0030552.1.mrna1;Target=FBgn0030552.1 678 976 +
Chr1	stalkie_big_nohaplotig	exon	146098616	146098707	98	-	.	Parent=FBgn0030552.1.mrna1;Target=FBgn0030552.1 586 677 +
Chr1	stalkie_big_nohaplotig	exon	146098912	146099031	96	-	.	Parent=FBgn0030552.1.mrna1;Target=FBgn0030552.1 466 585 +
Chr1	stalkie_big_nohaplotig	exon	146099086	146099231	99	-	.	Parent=FBgn0030552.1.mrna1;Target=FBgn0030552.1 320 465 +
Chr1	stalkie_big_nohaplotig	exon	146099291	146099446	99	-	.	Parent=FBgn0030552.1.mrna1;Target=FBgn0030552.1 164 319 +
Chr1	stalkie_big_nohaplotig	exon	146099513	146099675	99	-	.	Parent=FBgn0030552.1.mrna1;Target=FBgn0030552.1 1 163 +
Chr1	stalkie_big_nohaplotig	CDS	146097868	146098148	.	-	2	Parent=FBgn0030552.1.mrna1;Target=FBgn0030552.1 977 1257 +
Chr1	stalkie_big_nohaplotig	CDS	146098212	146098510	.	-	1	Parent=FBgn0030552.1.mrna1;Target=FBgn0030552.1 678 976 +
Chr1	stalkie_big_nohaplotig	CDS	146098616	146098707	.	-	0	Parent=FBgn0030552.1.mrna1;Target=FBgn0030552.1 586 677 +
Chr1	stalkie_big_nohaplotig	CDS	146098912	146099031	.	-	0	Parent=FBgn0030552.1.mrna1;Target=FBgn0030552.1 466 585 +
Chr1	stalkie_big_nohaplotig	CDS	146099086	146099231	.	-	2	Parent=FBgn0030552.1.mrna1;Target=FBgn0030552.1 320 465 +
Chr1	stalkie_big_nohaplotig	CDS	146099291	146099446	.	-	2	Parent=FBgn0030552.1.mrna1;Target=FBgn0030552.1 164 319 +
Chr1	stalkie_big_nohaplotig	CDS	146099513	146099675	.	-	0	Parent=FBgn0030552.1.mrna1;Target=FBgn0030552.1 1 163 +
Chr1	gffcl	locus	146158025	146203450	.	+	.	ID=RLOC_00012185;geneIDs=FBgn0027528.1.path1;transcripts=FBgn0027528.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146158025	146203450	.	+	.	ID=FBgn0027528.1.mrna1;geneID=FBgn0027528.1.path1;Name=FBgn0027528.1;Dir=sensecoverage=100.0;identity=99.1;matches=2634;mismatches=24;indels=0;unknowns=0;locus=RLOC_00012185
Chr1	stalkie_big_nohaplotig	exon	146158025	146158325	98	+	.	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 1 301 +
Chr1	stalkie_big_nohaplotig	exon	146158465	146158815	100	+	.	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 302 652 +
Chr1	stalkie_big_nohaplotig	exon	146158878	146159039	100	+	.	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 653 814 +
Chr1	stalkie_big_nohaplotig	exon	146197490	146197613	99	+	.	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 815 938 +
Chr1	stalkie_big_nohaplotig	exon	146197698	146197791	100	+	.	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 939 1032 +
Chr1	stalkie_big_nohaplotig	exon	146199616	146199664	95	+	.	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 1033 1081 +
Chr1	stalkie_big_nohaplotig	exon	146199733	146199887	100	+	.	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 1082 1236 +
Chr1	stalkie_big_nohaplotig	exon	146201359	146201486	100	+	.	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 1237 1364 +
Chr1	stalkie_big_nohaplotig	exon	146201555	146201658	99	+	.	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 1365 1468 +
Chr1	stalkie_big_nohaplotig	exon	146201953	146202242	98	+	.	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 1469 1758 +
Chr1	stalkie_big_nohaplotig	exon	146202303	146202490	100	+	.	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 1759 1946 +
Chr1	stalkie_big_nohaplotig	exon	146202550	146202672	99	+	.	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 1947 2069 +
Chr1	stalkie_big_nohaplotig	exon	146202745	146203248	98	+	.	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 2070 2573 +
Chr1	stalkie_big_nohaplotig	exon	146203366	146203450	100	+	.	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 2574 2658 +
Chr1	stalkie_big_nohaplotig	CDS	146158025	146158325	.	+	0	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 1 301 +
Chr1	stalkie_big_nohaplotig	CDS	146158465	146158815	.	+	2	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 302 652 +
Chr1	stalkie_big_nohaplotig	CDS	146158878	146159039	.	+	2	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 653 814 +
Chr1	stalkie_big_nohaplotig	CDS	146197490	146197613	.	+	2	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 815 938 +
Chr1	stalkie_big_nohaplotig	CDS	146197698	146197791	.	+	1	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 939 1032 +
Chr1	stalkie_big_nohaplotig	CDS	146199616	146199664	.	+	0	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 1033 1081 +
Chr1	stalkie_big_nohaplotig	CDS	146199733	146199887	.	+	2	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 1082 1236 +
Chr1	stalkie_big_nohaplotig	CDS	146201359	146201486	.	+	0	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 1237 1364 +
Chr1	stalkie_big_nohaplotig	CDS	146201555	146201658	.	+	1	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 1365 1468 +
Chr1	stalkie_big_nohaplotig	CDS	146201953	146202242	.	+	2	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 1469 1758 +
Chr1	stalkie_big_nohaplotig	CDS	146202303	146202490	.	+	0	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 1759 1946 +
Chr1	stalkie_big_nohaplotig	CDS	146202550	146202672	.	+	1	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 1947 2069 +
Chr1	stalkie_big_nohaplotig	CDS	146202745	146203248	.	+	1	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 2070 2573 +
Chr1	stalkie_big_nohaplotig	CDS	146203366	146203450	.	+	1	Parent=FBgn0027528.1.mrna1;Target=FBgn0027528.1 2574 2658 +
Chr1	gffcl	locus	146159798	146165971	.	-	.	ID=RLOC_00012186;geneIDs=FBgn0052574.1.path1;transcripts=FBgn0052574.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146159798	146165971	.	-	.	ID=FBgn0052574.1.mrna1;geneID=FBgn0052574.1.path1;Name=FBgn0052574.1;Dir=sensecoverage=100.0;identity=98.9;matches=914;mismatches=10;indels=0;unknowns=0;locus=RLOC_00012186
Chr1	stalkie_big_nohaplotig	exon	146159798	146160174	100	-	.	Parent=FBgn0052574.1.mrna1;Target=FBgn0052574.1 548 924 +
Chr1	stalkie_big_nohaplotig	exon	146160248	146160639	98	-	.	Parent=FBgn0052574.1.mrna1;Target=FBgn0052574.1 156 547 +
Chr1	stalkie_big_nohaplotig	exon	146162637	146162768	96	-	.	Parent=FBgn0052574.1.mrna1;Target=FBgn0052574.1 24 155 +
Chr1	stalkie_big_nohaplotig	exon	146165949	146165971	95	-	.	Parent=FBgn0052574.1.mrna1;Target=FBgn0052574.1 1 23 +
Chr1	stalkie_big_nohaplotig	CDS	146159798	146160174	.	-	2	Parent=FBgn0052574.1.mrna1;Target=FBgn0052574.1 548 924 +
Chr1	stalkie_big_nohaplotig	CDS	146160248	146160639	.	-	1	Parent=FBgn0052574.1.mrna1;Target=FBgn0052574.1 156 547 +
Chr1	stalkie_big_nohaplotig	CDS	146162637	146162768	.	-	1	Parent=FBgn0052574.1.mrna1;Target=FBgn0052574.1 24 155 +
Chr1	stalkie_big_nohaplotig	CDS	146165949	146165971	.	-	0	Parent=FBgn0052574.1.mrna1;Target=FBgn0052574.1 1 23 +
Chr1	gffcl	locus	146172058	146208260	.	+	.	ID=RLOC_00012187;geneIDs=comp160979_c0_seq1.path1;transcripts=comp160979_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146172058	146208260	.	+	.	ID=comp160979_c0_seq1.mrna1;geneID=comp160979_c0_seq1.path1;Name=comp160979_c0_seq1;Dir=indeterminatecoverage=96.1;identity=93.4;matches=1017;mismatches=35;indels=37;unknowns=0;Target=comp160979_c0_seq1 332 231 .;locus=RLOC_00012187
Chr1	stalkie_big_nohaplotig	exon	146172058	146172063	100	+	.	Parent=comp160979_c0_seq1.mrna1;Target=comp160979_c0_seq1 50 45 .
Chr1	stalkie_big_nohaplotig	exon	146188126	146188132	100	+	.	Parent=comp160979_c0_seq1.mrna1;Target=comp160979_c0_seq1 57 51 .
Chr1	stalkie_big_nohaplotig	exon	146207221	146208260	93	+	.	Parent=comp160979_c0_seq1.mrna1;Target=comp160979_c0_seq1 1132 58 .
Chr1	stalkie_big_nohaplotig	CDS	146207394	146207486	.	+	0	Parent=comp160979_c0_seq1.mrna1
Chr1	gffcl	locus	146193222	146194395	.	-	.	ID=RLOC_00012188;geneIDs=FBgn0052571.1.path1;transcripts=FBgn0052571.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146193222	146194395	.	-	.	ID=FBgn0052571.1.mrna1;geneID=FBgn0052571.1.path1;Name=FBgn0052571.1;Dir=sensecoverage=100.0;identity=98.6;matches=1080;mismatches=15;indels=0;unknowns=0;locus=RLOC_00012188
Chr1	stalkie_big_nohaplotig	exon	146193222	146193550	98	-	.	Parent=FBgn0052571.1.mrna1;Target=FBgn0052571.1 767 1095 +
Chr1	stalkie_big_nohaplotig	exon	146193630	146194395	98	-	.	Parent=FBgn0052571.1.mrna1;Target=FBgn0052571.1 1 766 +
Chr1	stalkie_big_nohaplotig	CDS	146193222	146193550	.	-	2	Parent=FBgn0052571.1.mrna1;Target=FBgn0052571.1 767 1095 +
Chr1	stalkie_big_nohaplotig	CDS	146193630	146194395	.	-	0	Parent=FBgn0052571.1.mrna1;Target=FBgn0052571.1 1 766 +
Chr1	gffcl	locus	146205249	146205712	.	+	.	ID=RLOC_00012189;geneIDs=comp149809_c0_seq1.path1;transcripts=comp149809_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146205249	146205712	.	+	.	ID=comp149809_c0_seq1.mrna1;geneID=comp149809_c0_seq1.path1;Name=comp149809_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=464;mismatches=0;indels=0;unknowns=0;Target=comp149809_c0_seq1 464 1 .;CDS_Target=comp149809_c0_seq1 82 2 .;locus=RLOC_00012189
Chr1	stalkie_big_nohaplotig	exon	146205249	146205712	100	+	.	Parent=comp149809_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	146205250	146205330	.	+	0	Parent=comp149809_c0_seq1.mrna1
Chr1	gffcl	locus	146208387	146208796	.	+	.	ID=RLOC_00012190;geneIDs=comp155392_c0_seq1.path1;transcripts=comp155392_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146208387	146208796	.	+	.	ID=comp155392_c0_seq1.mrna1;geneID=comp155392_c0_seq1.path1;Name=comp155392_c0_seq1;Dir=indeterminatecoverage=86.9;identity=89.3;matches=400;mismatches=7;indels=41;unknowns=0;Target=comp155392_c0_seq1 446 2 .;CDS_Target=comp155392_c0_seq1 59 3 .;locus=RLOC_00012190
Chr1	stalkie_big_nohaplotig	exon	146208387	146208796	89	+	.	Parent=comp155392_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	146208388	146208446	.	+	0	Parent=comp155392_c0_seq1.mrna1
Chr1	gffcl	locus	146214790	146215367	.	-	.	ID=RLOC_00012191;geneIDs=comp117252_c0_seq1.path1;transcripts=comp117252_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146214790	146215367	.	-	.	ID=comp117252_c0_seq1.mrna1;geneID=comp117252_c0_seq1.path1;Name=comp117252_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.5;matches=575;mismatches=3;indels=0;unknowns=0;Target=comp117252_c0_seq1 587 10 .;CDS_Target=comp117252_c0_seq1 587 519 .;locus=RLOC_00012191
Chr1	stalkie_big_nohaplotig	exon	146214790	146215367	99	-	.	Parent=comp117252_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	146214790	146214858	.	-	0	Parent=comp117252_c0_seq1.mrna1
Chr1	gffcl	locus	146216486	146992258	.	+	.	ID=RLOC_00012192;geneIDs=comp153755_c0_seq1.path1;transcripts=comp153755_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146216486	146992258	.	+	.	ID=comp153755_c0_seq1.mrna1;geneID=comp153755_c0_seq1.path1;Name=comp153755_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.3;matches=349;mismatches=24;indels=1;unknowns=0;Target=comp153755_c0_seq1 215 102 .;locus=RLOC_00012192
Chr1	stalkie_big_nohaplotig	exon	146216486	146216800	94	+	.	Parent=comp153755_c0_seq1.mrna1;Target=comp153755_c0_seq1 315 1 .
Chr1	stalkie_big_nohaplotig	exon	146938766	146938769	100	+	.	Parent=comp153755_c0_seq1.mrna1;Target=comp153755_c0_seq1 319 316 .
Chr1	stalkie_big_nohaplotig	exon	146985681	146985683	100	+	.	Parent=comp153755_c0_seq1.mrna1;Target=comp153755_c0_seq1 322 320 .
Chr1	stalkie_big_nohaplotig	exon	146992207	146992258	82	+	.	Parent=comp153755_c0_seq1.mrna1;Target=comp153755_c0_seq1 373 323 .
Chr1	stalkie_big_nohaplotig	CDS	146216587	146216700	.	+	0	Parent=comp153755_c0_seq1.mrna1
Chr1	gffcl	locus	146219275	146219672	.	-	.	ID=RLOC_00012193;geneIDs=comp50323_c0_seq1.path1;transcripts=comp50323_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146219275	146219672	.	-	.	ID=comp50323_c0_seq1.mrna1;geneID=comp50323_c0_seq1.path1;Name=comp50323_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.2;matches=395;mismatches=2;indels=1;unknowns=0;Target=comp50323_c0_seq1 397 1 .;CDS_Target=comp50323_c0_seq1 138 73 .;locus=RLOC_00012193
Chr1	stalkie_big_nohaplotig	exon	146219275	146219672	99	-	.	Parent=comp50323_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	146219534	146219599	.	-	0	Parent=comp50323_c0_seq1.mrna1
Chr1	gffcl	locus	146221322	146222273	.	+	.	ID=RLOC_00012194;geneIDs=comp162341_c0_seq1.path1;transcripts=comp162341_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146221322	146222273	.	+	.	ID=comp162341_c0_seq1.mrna1;geneID=comp162341_c0_seq1.path1;Name=comp162341_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=938;mismatches=14;indels=12;unknowns=0;Target=comp162341_c0_seq1 964 1 .;CDS_Target=comp162341_c0_seq1 344 243 .;locus=RLOC_00012194
Chr1	stalkie_big_nohaplotig	exon	146221322	146222273	97	+	.	Parent=comp162341_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	146221564	146221665	.	+	0	Parent=comp162341_c0_seq1.mrna1
Chr1	gffcl	locus	146223544	146224301	.	-	.	ID=RLOC_00012195;geneIDs=comp159889_c0_seq1.path1;transcripts=comp159889_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146223544	146224301	.	-	.	ID=comp159889_c0_seq1.mrna1;geneID=comp159889_c0_seq1.path1;Name=comp159889_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.5;matches=738;mismatches=19;indels=8;unknowns=0;Target=comp159889_c0_seq1 764 1 .;CDS_Target=comp159889_c0_seq1 140 48 .;locus=RLOC_00012195
Chr1	stalkie_big_nohaplotig	exon	146223544	146224301	96	-	.	Parent=comp159889_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	146224163	146224254	.	-	0	Parent=comp159889_c0_seq1.mrna1
Chr1	gffcl	locus	146225112	146225948	.	+	.	ID=RLOC_00012196;geneIDs=comp113080_c0_seq1.path1,comp153656_c0_seq1.path1;transcripts=comp153656_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146225426	146225948	.	+	.	ID=comp153656_c0_seq1.mrna1;geneID=comp153656_c0_seq1.path1;Name=comp153656_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=519;mismatches=0;indels=4;unknowns=0;Target=comp153656_c0_seq1 519 1 .;CDS_Target=comp153656_c0_seq1 30 1 .;locus=RLOC_00012196
Chr1	stalkie_big_nohaplotig	exon	146225426	146225948	99	+	.	Parent=comp153656_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	146225426	146225457	.	+	0	Parent=comp153656_c0_seq1.mrna1
Chr1	gffcl	locus	146226214	146227940	.	-	.	ID=RLOC_00012197;geneIDs=comp163495_c0_seq1.path1;transcripts=comp163495_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146226214	146227940	.	-	.	ID=comp163495_c0_seq1.mrna1;geneID=comp163495_c0_seq1.path1;Name=comp163495_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.0;matches=1691;mismatches=32;indels=57;unknowns=0;Target=comp163495_c0_seq1 1776 1 .;CDS_Target=comp163495_c0_seq1 1239 1054 .;locus=RLOC_00012197
Chr1	stalkie_big_nohaplotig	exon	146226214	146227940	95	-	.	Parent=comp163495_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	146226751	146226940	.	-	0	Parent=comp163495_c0_seq1.mrna1
Chr1	gffcl	locus	146227999	146228456	.	.	.	ID=RLOC_00012198;geneIDs=comp142956_c0_seq1.path1,comp153304_c0_seq1.path1;transcripts=comp153304_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146228180	146228456	.	+	.	ID=comp153304_c0_seq1.mrna1;geneID=comp153304_c0_seq1.path1;Name=comp153304_c0_seq1;Dir=indeterminatecoverage=91.2;identity=95.7;matches=267;mismatches=10;indels=2;unknowns=0;Target=comp153304_c0_seq1 279 1 .;CDS_Target=comp153304_c0_seq1 256 212 .;locus=RLOC_00012198
Chr1	stalkie_big_nohaplotig	exon	146228180	146228456	95	+	.	Parent=comp153304_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	146228389	146228433	.	+	0	Parent=comp153304_c0_seq1.mrna1
Chr1	gffcl	locus	146229677	146230344	.	-	.	ID=RLOC_00012199;geneIDs=comp161281_c0_seq1.path1;transcripts=comp161281_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146229677	146230344	.	-	.	ID=comp161281_c0_seq1.mrna1;geneID=comp161281_c0_seq1.path1;Name=comp161281_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=646;mismatches=14;indels=8;unknowns=0;Target=comp161281_c0_seq1 660 1 .;CDS_Target=comp161281_c0_seq1 295 146 .;locus=RLOC_00012199
Chr1	stalkie_big_nohaplotig	exon	146229677	146230344	96	-	.	Parent=comp161281_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	146230044	146230199	.	-	0	Parent=comp161281_c0_seq1.mrna1
Chr1	gffcl	locus	146231999	146232530	.	+	.	ID=RLOC_00012200;geneIDs=comp147174_c0_seq1.path1;transcripts=comp147174_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146231999	146232530	.	+	.	ID=comp147174_c0_seq1.mrna1;geneID=comp147174_c0_seq1.path1;Name=comp147174_c0_seq1;Dir=indeterminatecoverage=94.7;identity=99.2;matches=528;mismatches=4;indels=0;unknowns=0;Target=comp147174_c0_seq1 538 7 .;CDS_Target=comp147174_c0_seq1 538 416 .;locus=RLOC_00012200
Chr1	stalkie_big_nohaplotig	exon	146231999	146232530	99	+	.	Parent=comp147174_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	146232408	146232530	.	+	0	Parent=comp147174_c0_seq1.mrna1
Chr1	gffcl	locus	146468067	146470127	.	+	.	ID=RLOC_00012203;geneIDs=comp149103_c0_seq1.path1;transcripts=comp149103_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146468067	146470127	.	+	.	ID=comp149103_c0_seq1.mrna1;geneID=comp149103_c0_seq1.path1;Name=comp149103_c0_seq1;Dir=sensecoverage=96.7;identity=99.3;matches=1383;mismatches=4;indels=6;unknowns=0;Target=comp149103_c0_seq1 265 777 +;locus=RLOC_00012203
Chr1	stalkie_big_nohaplotig	exon	146468067	146469037	98	+	.	Parent=comp149103_c0_seq1.mrna1;Target=comp149103_c0_seq1 13 979 +
Chr1	stalkie_big_nohaplotig	exon	146469707	146470127	100	+	.	Parent=comp149103_c0_seq1.mrna1;Target=comp149103_c0_seq1 980 1400 +
Chr1	stalkie_big_nohaplotig	CDS	146468324	146468836	.	+	0	Parent=comp149103_c0_seq1.mrna1
Chr1	gffcl	locus	146476993	146477692	.	-	.	ID=RLOC_00012204;geneIDs=comp999422_c0_seq1.path1;transcripts=comp999422_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146476993	146477692	.	-	.	ID=comp999422_c0_seq1.mrna1;geneID=comp999422_c0_seq1.path1;Name=comp999422_c0_seq1;Dir=sensecoverage=98.9;identity=94.0;matches=329;mismatches=17;indels=4;unknowns=0;locus=RLOC_00012204
Chr1	stalkie_big_nohaplotig	exon	146476993	146477152	93	-	.	Parent=comp999422_c0_seq1.mrna1;Target=comp999422_c0_seq1 195 354 +
Chr1	stalkie_big_nohaplotig	exon	146477507	146477692	94	-	.	Parent=comp999422_c0_seq1.mrna1;Target=comp999422_c0_seq1 5 194 +
Chr1	stalkie_big_nohaplotig	CDS	146477036	146477152	.	-	0	Parent=comp999422_c0_seq1.mrna1;Target=comp999422_c0_seq1 195 311 +
Chr1	stalkie_big_nohaplotig	CDS	146477507	146477653	.	-	0	Parent=comp999422_c0_seq1.mrna1;Target=comp999422_c0_seq1 48 194 +
Chr1	gffcl	locus	146569521	146578867	.	-	.	ID=RLOC_00012205;geneIDs=comp144134_c0_seq1.path1;transcripts=comp144134_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146569521	146578867	.	-	.	ID=comp144134_c0_seq1.mrna1;geneID=comp144134_c0_seq1.path1;Name=comp144134_c0_seq1;Dir=antisensecoverage=97.9;identity=99.9;matches=1048;mismatches=1;indels=0;unknowns=0;Target=comp144134_c0_seq1 379 795 .;locus=RLOC_00012205
Chr1	stalkie_big_nohaplotig	exon	146569521	146569846	100	-	.	Parent=comp144134_c0_seq1.mrna1;Target=comp144134_c0_seq1 19 344 -
Chr1	stalkie_big_nohaplotig	exon	146569910	146570424	100	-	.	Parent=comp144134_c0_seq1.mrna1;Target=comp144134_c0_seq1 345 859 -
Chr1	stalkie_big_nohaplotig	exon	146578660	146578867	99	-	.	Parent=comp144134_c0_seq1.mrna1;Target=comp144134_c0_seq1 860 1067 -
Chr1	stalkie_big_nohaplotig	CDS	146569944	146570360	.	-	0	Parent=comp144134_c0_seq1.mrna1
Chr1	gffcl	locus	146606578	146607580	.	-	.	ID=RLOC_00012206;geneIDs=FBgn0021765.1.path1;transcripts=FBgn0021765.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146606578	146607580	.	-	.	ID=FBgn0021765.1.mrna1;geneID=FBgn0021765.1.path1;Name=FBgn0021765.1;Dir=sensecoverage=100.0;identity=99.2;matches=777;mismatches=6;indels=0;unknowns=0;locus=RLOC_00012206
Chr1	stalkie_big_nohaplotig	exon	146606578	146607333	99	-	.	Parent=FBgn0021765.1.mrna1;Target=FBgn0021765.1 28 783 +
Chr1	stalkie_big_nohaplotig	exon	146607554	146607580	100	-	.	Parent=FBgn0021765.1.mrna1;Target=FBgn0021765.1 1 27 +
Chr1	stalkie_big_nohaplotig	CDS	146606578	146607333	.	-	0	Parent=FBgn0021765.1.mrna1;Target=FBgn0021765.1 28 783 +
Chr1	stalkie_big_nohaplotig	CDS	146607554	146607580	.	-	0	Parent=FBgn0021765.1.mrna1;Target=FBgn0021765.1 1 27 +
Chr1	gffcl	locus	146609090	146611509	.	+	.	ID=RLOC_00012207;geneIDs=FBgn0030892.1.path1;transcripts=FBgn0030892.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146609090	146611509	.	+	.	ID=FBgn0030892.1.mrna1;geneID=FBgn0030892.1.path1;Name=FBgn0030892.1;Dir=sensecoverage=100.0;identity=99.3;matches=1906;mismatches=14;indels=0;unknowns=0;locus=RLOC_00012207
Chr1	stalkie_big_nohaplotig	exon	146609090	146609270	99	+	.	Parent=FBgn0030892.1.mrna1;Target=FBgn0030892.1 1 181 +
Chr1	stalkie_big_nohaplotig	exon	146609338	146610036	100	+	.	Parent=FBgn0030892.1.mrna1;Target=FBgn0030892.1 182 880 +
Chr1	stalkie_big_nohaplotig	exon	146610093	146610200	100	+	.	Parent=FBgn0030892.1.mrna1;Target=FBgn0030892.1 881 988 +
Chr1	stalkie_big_nohaplotig	exon	146610261	146610347	100	+	.	Parent=FBgn0030892.1.mrna1;Target=FBgn0030892.1 989 1075 +
Chr1	stalkie_big_nohaplotig	exon	146610405	146610563	97	+	.	Parent=FBgn0030892.1.mrna1;Target=FBgn0030892.1 1076 1234 +
Chr1	stalkie_big_nohaplotig	exon	146610619	146610665	100	+	.	Parent=FBgn0030892.1.mrna1;Target=FBgn0030892.1 1235 1281 +
Chr1	stalkie_big_nohaplotig	exon	146610734	146611001	98	+	.	Parent=FBgn0030892.1.mrna1;Target=FBgn0030892.1 1282 1549 +
Chr1	stalkie_big_nohaplotig	exon	146611068	146611223	98	+	.	Parent=FBgn0030892.1.mrna1;Target=FBgn0030892.1 1550 1705 +
Chr1	stalkie_big_nohaplotig	exon	146611295	146611509	99	+	.	Parent=FBgn0030892.1.mrna1;Target=FBgn0030892.1 1706 1920 +
Chr1	stalkie_big_nohaplotig	CDS	146609090	146609270	.	+	0	Parent=FBgn0030892.1.mrna1;Target=FBgn0030892.1 1 181 +
Chr1	stalkie_big_nohaplotig	CDS	146609338	146610036	.	+	2	Parent=FBgn0030892.1.mrna1;Target=FBgn0030892.1 182 880 +
Chr1	stalkie_big_nohaplotig	CDS	146610093	146610200	.	+	2	Parent=FBgn0030892.1.mrna1;Target=FBgn0030892.1 881 988 +
Chr1	stalkie_big_nohaplotig	CDS	146610261	146610347	.	+	2	Parent=FBgn0030892.1.mrna1;Target=FBgn0030892.1 989 1075 +
Chr1	stalkie_big_nohaplotig	CDS	146610405	146610563	.	+	2	Parent=FBgn0030892.1.mrna1;Target=FBgn0030892.1 1076 1234 +
Chr1	stalkie_big_nohaplotig	CDS	146610619	146610665	.	+	2	Parent=FBgn0030892.1.mrna1;Target=FBgn0030892.1 1235 1281 +
Chr1	stalkie_big_nohaplotig	CDS	146610734	146611001	.	+	0	Parent=FBgn0030892.1.mrna1;Target=FBgn0030892.1 1282 1549 +
Chr1	stalkie_big_nohaplotig	CDS	146611068	146611223	.	+	2	Parent=FBgn0030892.1.mrna1;Target=FBgn0030892.1 1550 1705 +
Chr1	stalkie_big_nohaplotig	CDS	146611295	146611509	.	+	2	Parent=FBgn0030892.1.mrna1;Target=FBgn0030892.1 1706 1920 +
Chr1	gffcl	locus	146614749	146616306	.	-	.	ID=RLOC_00012208;geneIDs=FBgn0030891.1.path1;transcripts=FBgn0030891.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146614749	146616306	.	-	.	ID=FBgn0030891.1.mrna1;geneID=FBgn0030891.1.path1;Name=FBgn0030891.1;Dir=sensecoverage=100.0;identity=99.2;matches=1488;mismatches=10;indels=2;unknowns=0;Target=FBgn0030891.1 2 16 +;locus=RLOC_00012208
Chr1	stalkie_big_nohaplotig	exon	146614749	146616181	99	-	.	Parent=FBgn0030891.1.mrna1;Target=FBgn0030891.1 68 1500 +
Chr1	stalkie_big_nohaplotig	exon	146616242	146616306	95	-	.	Parent=FBgn0030891.1.mrna1;Target=FBgn0030891.1 1 67 +
Chr1	stalkie_big_nohaplotig	CDS	146616293	146616305	.	-	0	Parent=FBgn0030891.1.mrna1
Chr1	gffcl	locus	146632735	146637027	.	+	.	ID=RLOC_00012209;geneIDs=FBgn0030890.2.path1;transcripts=FBgn0030890.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146632735	146637027	.	+	.	ID=FBgn0030890.2.mrna1;geneID=FBgn0030890.2.path1;Name=FBgn0030890.2;Dir=sensecoverage=100.0;identity=99.8;matches=2027;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012209
Chr1	stalkie_big_nohaplotig	exon	146632735	146632812	100	+	.	Parent=FBgn0030890.2.mrna1;Target=FBgn0030890.2 1 78 +
Chr1	stalkie_big_nohaplotig	exon	146634629	146635024	99	+	.	Parent=FBgn0030890.2.mrna1;Target=FBgn0030890.2 79 474 +
Chr1	stalkie_big_nohaplotig	exon	146635087	146635348	100	+	.	Parent=FBgn0030890.2.mrna1;Target=FBgn0030890.2 475 736 +
Chr1	stalkie_big_nohaplotig	exon	146635437	146635807	99	+	.	Parent=FBgn0030890.2.mrna1;Target=FBgn0030890.2 737 1107 +
Chr1	stalkie_big_nohaplotig	exon	146635883	146636225	100	+	.	Parent=FBgn0030890.2.mrna1;Target=FBgn0030890.2 1108 1450 +
Chr1	stalkie_big_nohaplotig	exon	146636325	146636494	99	+	.	Parent=FBgn0030890.2.mrna1;Target=FBgn0030890.2 1451 1620 +
Chr1	stalkie_big_nohaplotig	exon	146636553	146636686	100	+	.	Parent=FBgn0030890.2.mrna1;Target=FBgn0030890.2 1621 1754 +
Chr1	stalkie_big_nohaplotig	exon	146636751	146637027	100	+	.	Parent=FBgn0030890.2.mrna1;Target=FBgn0030890.2 1755 2031 +
Chr1	stalkie_big_nohaplotig	CDS	146632735	146632812	.	+	0	Parent=FBgn0030890.2.mrna1;Target=FBgn0030890.2 1 78 +
Chr1	stalkie_big_nohaplotig	CDS	146634629	146635024	.	+	0	Parent=FBgn0030890.2.mrna1;Target=FBgn0030890.2 79 474 +
Chr1	stalkie_big_nohaplotig	CDS	146635087	146635348	.	+	0	Parent=FBgn0030890.2.mrna1;Target=FBgn0030890.2 475 736 +
Chr1	stalkie_big_nohaplotig	CDS	146635437	146635807	.	+	2	Parent=FBgn0030890.2.mrna1;Target=FBgn0030890.2 737 1107 +
Chr1	stalkie_big_nohaplotig	CDS	146635883	146636225	.	+	0	Parent=FBgn0030890.2.mrna1;Target=FBgn0030890.2 1108 1450 +
Chr1	stalkie_big_nohaplotig	CDS	146636325	146636494	.	+	2	Parent=FBgn0030890.2.mrna1;Target=FBgn0030890.2 1451 1620 +
Chr1	stalkie_big_nohaplotig	CDS	146636553	146636686	.	+	0	Parent=FBgn0030890.2.mrna1;Target=FBgn0030890.2 1621 1754 +
Chr1	stalkie_big_nohaplotig	CDS	146636751	146637027	.	+	1	Parent=FBgn0030890.2.mrna1;Target=FBgn0030890.2 1755 2031 +
Chr1	gffcl	locus	146639486	146642230	.	+	.	ID=RLOC_00012210;geneIDs=FBgn0030890.1.path1;transcripts=FBgn0030890.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146639486	146642230	.	+	.	ID=FBgn0030890.1.mrna1;geneID=FBgn0030890.1.path1;Name=FBgn0030890.1;Dir=sensecoverage=100.0;identity=99.9;matches=1927;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012210
Chr1	stalkie_big_nohaplotig	exon	146639486	146639587	100	+	.	Parent=FBgn0030890.1.mrna1;Target=FBgn0030890.1 1 102 +
Chr1	stalkie_big_nohaplotig	exon	146639647	146640030	100	+	.	Parent=FBgn0030890.1.mrna1;Target=FBgn0030890.1 103 486 +
Chr1	stalkie_big_nohaplotig	exon	146640320	146640581	99	+	.	Parent=FBgn0030890.1.mrna1;Target=FBgn0030890.1 487 748 +
Chr1	stalkie_big_nohaplotig	exon	146640641	146641011	100	+	.	Parent=FBgn0030890.1.mrna1;Target=FBgn0030890.1 749 1119 +
Chr1	stalkie_big_nohaplotig	exon	146641074	146641413	100	+	.	Parent=FBgn0030890.1.mrna1;Target=FBgn0030890.1 1120 1459 +
Chr1	stalkie_big_nohaplotig	exon	146641491	146641657	100	+	.	Parent=FBgn0030890.1.mrna1;Target=FBgn0030890.1 1460 1626 +
Chr1	stalkie_big_nohaplotig	exon	146641873	146642006	100	+	.	Parent=FBgn0030890.1.mrna1;Target=FBgn0030890.1 1627 1760 +
Chr1	stalkie_big_nohaplotig	exon	146642062	146642230	100	+	.	Parent=FBgn0030890.1.mrna1;Target=FBgn0030890.1 1761 1929 +
Chr1	stalkie_big_nohaplotig	CDS	146639486	146639587	.	+	0	Parent=FBgn0030890.1.mrna1;Target=FBgn0030890.1 1 102 +
Chr1	stalkie_big_nohaplotig	CDS	146639647	146640030	.	+	0	Parent=FBgn0030890.1.mrna1;Target=FBgn0030890.1 103 486 +
Chr1	stalkie_big_nohaplotig	CDS	146640320	146640581	.	+	0	Parent=FBgn0030890.1.mrna1;Target=FBgn0030890.1 487 748 +
Chr1	stalkie_big_nohaplotig	CDS	146640641	146641011	.	+	2	Parent=FBgn0030890.1.mrna1;Target=FBgn0030890.1 749 1119 +
Chr1	stalkie_big_nohaplotig	CDS	146641074	146641413	.	+	0	Parent=FBgn0030890.1.mrna1;Target=FBgn0030890.1 1120 1459 +
Chr1	stalkie_big_nohaplotig	CDS	146641491	146641657	.	+	2	Parent=FBgn0030890.1.mrna1;Target=FBgn0030890.1 1460 1626 +
Chr1	stalkie_big_nohaplotig	CDS	146641873	146642006	.	+	0	Parent=FBgn0030890.1.mrna1;Target=FBgn0030890.1 1627 1760 +
Chr1	stalkie_big_nohaplotig	CDS	146642062	146642230	.	+	1	Parent=FBgn0030890.1.mrna1;Target=FBgn0030890.1 1761 1929 +
Chr1	gffcl	locus	146642892	146663145	.	-	.	ID=RLOC_00012211;geneIDs=FBgn0013809.1.path1;transcripts=FBgn0013809.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146642892	146663145	.	-	.	ID=FBgn0013809.1.mrna1;geneID=FBgn0013809.1.path1;Name=FBgn0013809.1;Dir=sensecoverage=100.0;identity=99.9;matches=11980;mismatches=17;indels=0;unknowns=0;locus=RLOC_00012211
Chr1	stalkie_big_nohaplotig	exon	146642892	146643245	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 11644 11997 +
Chr1	stalkie_big_nohaplotig	exon	146643301	146643771	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 11173 11643 +
Chr1	stalkie_big_nohaplotig	exon	146643841	146644909	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 10104 11172 +
Chr1	stalkie_big_nohaplotig	exon	146645429	146645622	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 9910 10103 +
Chr1	stalkie_big_nohaplotig	exon	146645681	146646241	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 9349 9909 +
Chr1	stalkie_big_nohaplotig	exon	146646306	146646486	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 9168 9348 +
Chr1	stalkie_big_nohaplotig	exon	146646610	146646968	99	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 8809 9167 +
Chr1	stalkie_big_nohaplotig	exon	146647656	146647958	99	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 8506 8808 +
Chr1	stalkie_big_nohaplotig	exon	146648094	146648435	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 8164 8505 +
Chr1	stalkie_big_nohaplotig	exon	146648501	146648642	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 8022 8163 +
Chr1	stalkie_big_nohaplotig	exon	146648697	146649046	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 7672 8021 +
Chr1	stalkie_big_nohaplotig	exon	146649901	146650086	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 7486 7671 +
Chr1	stalkie_big_nohaplotig	exon	146650176	146650442	99	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 7219 7485 +
Chr1	stalkie_big_nohaplotig	exon	146650566	146650745	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 7039 7218 +
Chr1	stalkie_big_nohaplotig	exon	146650811	146651528	99	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 6321 7038 +
Chr1	stalkie_big_nohaplotig	exon	146652617	146652700	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 6237 6320 +
Chr1	stalkie_big_nohaplotig	exon	146652761	146652883	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 6114 6236 +
Chr1	stalkie_big_nohaplotig	exon	146654136	146654447	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 5802 6113 +
Chr1	stalkie_big_nohaplotig	exon	146654510	146654659	99	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 5652 5801 +
Chr1	stalkie_big_nohaplotig	exon	146654832	146655426	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 5057 5651 +
Chr1	stalkie_big_nohaplotig	exon	146655495	146656318	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 4233 5056 +
Chr1	stalkie_big_nohaplotig	exon	146656379	146656831	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 3780 4232 +
Chr1	stalkie_big_nohaplotig	exon	146656894	146657197	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 3476 3779 +
Chr1	stalkie_big_nohaplotig	exon	146657286	146657629	99	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 3132 3475 +
Chr1	stalkie_big_nohaplotig	exon	146657688	146657964	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 2855 3131 +
Chr1	stalkie_big_nohaplotig	exon	146658019	146658406	99	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 2467 2854 +
Chr1	stalkie_big_nohaplotig	exon	146658474	146658773	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 2167 2466 +
Chr1	stalkie_big_nohaplotig	exon	146658874	146658984	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 2056 2166 +
Chr1	stalkie_big_nohaplotig	exon	146659062	146659461	99	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 1656 2055 +
Chr1	stalkie_big_nohaplotig	exon	146659920	146660094	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 1481 1655 +
Chr1	stalkie_big_nohaplotig	exon	146660181	146660311	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 1350 1480 +
Chr1	stalkie_big_nohaplotig	exon	146660375	146660470	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 1254 1349 +
Chr1	stalkie_big_nohaplotig	exon	146660541	146660645	99	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 1149 1253 +
Chr1	stalkie_big_nohaplotig	exon	146660705	146660766	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 1087 1148 +
Chr1	stalkie_big_nohaplotig	exon	146660839	146661022	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 903 1086 +
Chr1	stalkie_big_nohaplotig	exon	146662031	146662175	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 758 902 +
Chr1	stalkie_big_nohaplotig	exon	146662239	146662346	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 650 757 +
Chr1	stalkie_big_nohaplotig	exon	146662442	146662788	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 303 649 +
Chr1	stalkie_big_nohaplotig	exon	146662844	146663145	100	-	.	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 1 302 +
Chr1	stalkie_big_nohaplotig	CDS	146642892	146643245	.	-	0	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 11644 11997 +
Chr1	stalkie_big_nohaplotig	CDS	146643301	146643771	.	-	0	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 11173 11643 +
Chr1	stalkie_big_nohaplotig	CDS	146643841	146644909	.	-	1	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 10104 11172 +
Chr1	stalkie_big_nohaplotig	CDS	146645429	146645622	.	-	0	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 9910 10103 +
Chr1	stalkie_big_nohaplotig	CDS	146645681	146646241	.	-	0	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 9349 9909 +
Chr1	stalkie_big_nohaplotig	CDS	146646306	146646486	.	-	1	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 9168 9348 +
Chr1	stalkie_big_nohaplotig	CDS	146646610	146646968	.	-	0	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 8809 9167 +
Chr1	stalkie_big_nohaplotig	CDS	146647656	146647958	.	-	0	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 8506 8808 +
Chr1	stalkie_big_nohaplotig	CDS	146648094	146648435	.	-	0	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 8164 8505 +
Chr1	stalkie_big_nohaplotig	CDS	146648501	146648642	.	-	1	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 8022 8163 +
Chr1	stalkie_big_nohaplotig	CDS	146648697	146649046	.	-	0	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 7672 8021 +
Chr1	stalkie_big_nohaplotig	CDS	146649901	146650086	.	-	0	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 7486 7671 +
Chr1	stalkie_big_nohaplotig	CDS	146650176	146650442	.	-	0	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 7219 7485 +
Chr1	stalkie_big_nohaplotig	CDS	146650566	146650745	.	-	0	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 7039 7218 +
Chr1	stalkie_big_nohaplotig	CDS	146650811	146651528	.	-	1	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 6321 7038 +
Chr1	stalkie_big_nohaplotig	CDS	146652617	146652700	.	-	1	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 6237 6320 +
Chr1	stalkie_big_nohaplotig	CDS	146652761	146652883	.	-	1	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 6114 6236 +
Chr1	stalkie_big_nohaplotig	CDS	146654136	146654447	.	-	1	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 5802 6113 +
Chr1	stalkie_big_nohaplotig	CDS	146654510	146654659	.	-	1	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 5652 5801 +
Chr1	stalkie_big_nohaplotig	CDS	146654832	146655426	.	-	2	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 5057 5651 +
Chr1	stalkie_big_nohaplotig	CDS	146655495	146656318	.	-	1	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 4233 5056 +
Chr1	stalkie_big_nohaplotig	CDS	146656379	146656831	.	-	1	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 3780 4232 +
Chr1	stalkie_big_nohaplotig	CDS	146656894	146657197	.	-	2	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 3476 3779 +
Chr1	stalkie_big_nohaplotig	CDS	146657286	146657629	.	-	1	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 3132 3475 +
Chr1	stalkie_big_nohaplotig	CDS	146657688	146657964	.	-	2	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 2855 3131 +
Chr1	stalkie_big_nohaplotig	CDS	146658019	146658406	.	-	0	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 2467 2854 +
Chr1	stalkie_big_nohaplotig	CDS	146658474	146658773	.	-	0	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 2167 2466 +
Chr1	stalkie_big_nohaplotig	CDS	146658874	146658984	.	-	0	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 2056 2166 +
Chr1	stalkie_big_nohaplotig	CDS	146659062	146659461	.	-	1	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 1656 2055 +
Chr1	stalkie_big_nohaplotig	CDS	146659920	146660094	.	-	2	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 1481 1655 +
Chr1	stalkie_big_nohaplotig	CDS	146660181	146660311	.	-	1	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 1350 1480 +
Chr1	stalkie_big_nohaplotig	CDS	146660375	146660470	.	-	1	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 1254 1349 +
Chr1	stalkie_big_nohaplotig	CDS	146660541	146660645	.	-	1	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 1149 1253 +
Chr1	stalkie_big_nohaplotig	CDS	146660705	146660766	.	-	0	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 1087 1148 +
Chr1	stalkie_big_nohaplotig	CDS	146660839	146661022	.	-	1	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 903 1086 +
Chr1	stalkie_big_nohaplotig	CDS	146662031	146662175	.	-	2	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 758 902 +
Chr1	stalkie_big_nohaplotig	CDS	146662239	146662346	.	-	2	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 650 757 +
Chr1	stalkie_big_nohaplotig	CDS	146662442	146662788	.	-	1	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 303 649 +
Chr1	stalkie_big_nohaplotig	CDS	146662844	146663145	.	-	0	Parent=FBgn0013809.1.mrna1;Target=FBgn0013809.1 1 302 +
Chr1	gffcl	locus	146665553	148486363	.	+	.	ID=RLOC_00012212;geneIDs=FBgn0037802.1.path1,comp89574_c0_seq1.path1;transcripts=comp89574_c0_seq1.mrna1,FBgn0037802.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146665553	148486363	.	+	.	ID=comp89574_c0_seq1.mrna1;geneID=comp89574_c0_seq1.path1;Name=comp89574_c0_seq1;Dir=indeterminatecoverage=90.3;identity=90.1;matches=191;mismatches=5;indels=16;unknowns=0;Target=comp89574_c0_seq1 41 15 .;locus=RLOC_00012212
Chr1	stalkie_big_nohaplotig	exon	146665553	146665705	90	+	.	Parent=comp89574_c0_seq1.mrna1;Target=comp89574_c0_seq1 166 14 .
Chr1	stalkie_big_nohaplotig	exon	148459949	148459951	100	+	.	Parent=comp89574_c0_seq1.mrna1;Target=comp89574_c0_seq1 169 167 .
Chr1	stalkie_big_nohaplotig	exon	148461468	148461469	100	+	.	Parent=comp89574_c0_seq1.mrna1;Target=comp89574_c0_seq1 171 170 .
Chr1	stalkie_big_nohaplotig	exon	148469356	148469359	100	+	.	Parent=comp89574_c0_seq1.mrna1;Target=comp89574_c0_seq1 175 172 .
Chr1	stalkie_big_nohaplotig	exon	148474547	148474551	100	+	.	Parent=comp89574_c0_seq1.mrna1;Target=comp89574_c0_seq1 180 176 .
Chr1	stalkie_big_nohaplotig	exon	148476813	148476816	100	+	.	Parent=comp89574_c0_seq1.mrna1;Target=comp89574_c0_seq1 184 181 .
Chr1	stalkie_big_nohaplotig	exon	148478115	148478118	100	+	.	Parent=comp89574_c0_seq1.mrna1;Target=comp89574_c0_seq1 188 185 .
Chr1	stalkie_big_nohaplotig	exon	148481677	148481678	100	+	.	Parent=comp89574_c0_seq1.mrna1;Target=comp89574_c0_seq1 190 189 .
Chr1	stalkie_big_nohaplotig	exon	148486337	148486363	81	+	.	Parent=comp89574_c0_seq1.mrna1;Target=comp89574_c0_seq1 217 191 .
Chr1	stalkie_big_nohaplotig	CDS	146665554	146665580	.	+	0	Parent=comp89574_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148481488	148482838	.	+	.	ID=FBgn0037802.1.mrna1;geneID=FBgn0037802.1.path1;Name=FBgn0037802.1;Dir=sensecoverage=100.0;identity=100.0;matches=1077;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012212
Chr1	stalkie_big_nohaplotig	exon	148481488	148481577	100	+	.	Parent=FBgn0037802.1.mrna1;Target=FBgn0037802.1 1 90 +
Chr1	stalkie_big_nohaplotig	exon	148481649	148481776	100	+	.	Parent=FBgn0037802.1.mrna1;Target=FBgn0037802.1 91 218 +
Chr1	stalkie_big_nohaplotig	exon	148481834	148482253	100	+	.	Parent=FBgn0037802.1.mrna1;Target=FBgn0037802.1 219 638 +
Chr1	stalkie_big_nohaplotig	exon	148482322	148482445	100	+	.	Parent=FBgn0037802.1.mrna1;Target=FBgn0037802.1 639 762 +
Chr1	stalkie_big_nohaplotig	exon	148482524	148482838	100	+	.	Parent=FBgn0037802.1.mrna1;Target=FBgn0037802.1 763 1077 +
Chr1	stalkie_big_nohaplotig	CDS	148481488	148481577	.	+	0	Parent=FBgn0037802.1.mrna1;Target=FBgn0037802.1 1 90 +
Chr1	stalkie_big_nohaplotig	CDS	148481649	148481776	.	+	0	Parent=FBgn0037802.1.mrna1;Target=FBgn0037802.1 91 218 +
Chr1	stalkie_big_nohaplotig	CDS	148481834	148482253	.	+	1	Parent=FBgn0037802.1.mrna1;Target=FBgn0037802.1 219 638 +
Chr1	stalkie_big_nohaplotig	CDS	148482322	148482445	.	+	1	Parent=FBgn0037802.1.mrna1;Target=FBgn0037802.1 639 762 +
Chr1	stalkie_big_nohaplotig	CDS	148482524	148482838	.	+	0	Parent=FBgn0037802.1.mrna1;Target=FBgn0037802.1 763 1077 +
Chr1	gffcl	locus	146773836	146774335	.	+	.	ID=RLOC_00012214;geneIDs=comp151609_c0_seq1.path1;transcripts=comp151609_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146773836	146774335	.	+	.	ID=comp151609_c0_seq1.mrna1;geneID=comp151609_c0_seq1.path1;Name=comp151609_c0_seq1;Dir=sensecoverage=95.0;identity=99.1;matches=319;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012214
Chr1	stalkie_big_nohaplotig	exon	146773836	146773930	98	+	.	Parent=comp151609_c0_seq1.mrna1;Target=comp151609_c0_seq1 18 112 +
Chr1	stalkie_big_nohaplotig	exon	146774109	146774335	99	+	.	Parent=comp151609_c0_seq1.mrna1;Target=comp151609_c0_seq1 113 339 +
Chr1	stalkie_big_nohaplotig	CDS	146773898	146773930	.	+	0	Parent=comp151609_c0_seq1.mrna1;Target=comp151609_c0_seq1 80 112 +
Chr1	stalkie_big_nohaplotig	CDS	146774109	146774201	.	+	0	Parent=comp151609_c0_seq1.mrna1;Target=comp151609_c0_seq1 113 205 +
Chr1	gffcl	locus	146777189	146777631	.	+	.	ID=RLOC_00012215;geneIDs=comp149235_c0_seq1.path1;transcripts=comp149235_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146777189	146777631	.	+	.	ID=comp149235_c0_seq1.mrna1;geneID=comp149235_c0_seq1.path1;Name=comp149235_c0_seq1;Dir=antisensecoverage=88.9;identity=99.4;matches=317;mismatches=1;indels=1;unknowns=0;locus=RLOC_00012215
Chr1	stalkie_big_nohaplotig	exon	146777189	146777243	96	+	.	Parent=comp149235_c0_seq1.mrna1;Target=comp149235_c0_seq1 304 359 -
Chr1	stalkie_big_nohaplotig	exon	146777369	146777631	100	+	.	Parent=comp149235_c0_seq1.mrna1;Target=comp149235_c0_seq1 41 303 -
Chr1	stalkie_big_nohaplotig	CDS	146777190	146777243	.	+	0	Parent=comp149235_c0_seq1.mrna1;Target=comp149235_c0_seq1 304 358 .
Chr1	stalkie_big_nohaplotig	CDS	146777369	146777370	.	+	0	Parent=comp149235_c0_seq1.mrna1;Target=comp149235_c0_seq1 302 303 .
Chr1	gffcl	locus	146784957	146788370	.	+	.	ID=RLOC_00012216;geneIDs=FBgn0051759.1.path1;transcripts=FBgn0051759.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146784957	146788370	.	+	.	ID=FBgn0051759.1.mrna1;geneID=FBgn0051759.1.path1;Name=FBgn0051759.1;Dir=sensecoverage=100.0;identity=99.2;matches=1908;mismatches=15;indels=0;unknowns=0;locus=RLOC_00012216
Chr1	stalkie_big_nohaplotig	exon	146784957	146785397	98	+	.	Parent=FBgn0051759.1.mrna1;Target=FBgn0051759.1 1 441 +
Chr1	stalkie_big_nohaplotig	exon	146785455	146785715	100	+	.	Parent=FBgn0051759.1.mrna1;Target=FBgn0051759.1 442 702 +
Chr1	stalkie_big_nohaplotig	exon	146785981	146786658	98	+	.	Parent=FBgn0051759.1.mrna1;Target=FBgn0051759.1 703 1380 +
Chr1	stalkie_big_nohaplotig	exon	146787695	146787980	99	+	.	Parent=FBgn0051759.1.mrna1;Target=FBgn0051759.1 1381 1666 +
Chr1	stalkie_big_nohaplotig	exon	146788040	146788191	100	+	.	Parent=FBgn0051759.1.mrna1;Target=FBgn0051759.1 1667 1818 +
Chr1	stalkie_big_nohaplotig	exon	146788266	146788370	100	+	.	Parent=FBgn0051759.1.mrna1;Target=FBgn0051759.1 1819 1923 +
Chr1	stalkie_big_nohaplotig	CDS	146784957	146785397	.	+	0	Parent=FBgn0051759.1.mrna1;Target=FBgn0051759.1 1 441 +
Chr1	stalkie_big_nohaplotig	CDS	146785455	146785715	.	+	0	Parent=FBgn0051759.1.mrna1;Target=FBgn0051759.1 442 702 +
Chr1	stalkie_big_nohaplotig	CDS	146785981	146786658	.	+	0	Parent=FBgn0051759.1.mrna1;Target=FBgn0051759.1 703 1380 +
Chr1	stalkie_big_nohaplotig	CDS	146787695	146787980	.	+	0	Parent=FBgn0051759.1.mrna1;Target=FBgn0051759.1 1381 1666 +
Chr1	stalkie_big_nohaplotig	CDS	146788040	146788191	.	+	2	Parent=FBgn0051759.1.mrna1;Target=FBgn0051759.1 1667 1818 +
Chr1	stalkie_big_nohaplotig	CDS	146788266	146788370	.	+	0	Parent=FBgn0051759.1.mrna1;Target=FBgn0051759.1 1819 1923 +
Chr1	gffcl	locus	146788572	146789499	.	-	.	ID=RLOC_00012217;geneIDs=FBgn0030718.1.path1;transcripts=FBgn0030718.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146788572	146789499	.	-	.	ID=FBgn0030718.1.mrna1;geneID=FBgn0030718.1.path1;Name=FBgn0030718.1;Dir=sensecoverage=100.0;identity=99.2;matches=792;mismatches=6;indels=0;unknowns=0;Target=FBgn0030718.1 130 798 +;locus=RLOC_00012217
Chr1	stalkie_big_nohaplotig	exon	146788572	146789244	99	-	.	Parent=FBgn0030718.1.mrna1;Target=FBgn0030718.1 126 798 +
Chr1	stalkie_big_nohaplotig	exon	146789375	146789499	98	-	.	Parent=FBgn0030718.1.mrna1;Target=FBgn0030718.1 1 125 +
Chr1	stalkie_big_nohaplotig	CDS	146788572	146789240	.	-	0	Parent=FBgn0030718.1.mrna1
Chr1	gffcl	locus	146793347	146797762	.	-	.	ID=RLOC_00012218;geneIDs=FBgn0030703.1.path1;transcripts=FBgn0030703.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146793347	146797762	.	-	.	ID=FBgn0030703.1.mrna1;geneID=FBgn0030703.1.path1;Name=FBgn0030703.1;Dir=sensecoverage=100.0;identity=100.0;matches=639;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012218
Chr1	stalkie_big_nohaplotig	exon	146793347	146793519	100	-	.	Parent=FBgn0030703.1.mrna1;Target=FBgn0030703.1 467 639 +
Chr1	stalkie_big_nohaplotig	exon	146793586	146793738	100	-	.	Parent=FBgn0030703.1.mrna1;Target=FBgn0030703.1 314 466 +
Chr1	stalkie_big_nohaplotig	exon	146797450	146797762	100	-	.	Parent=FBgn0030703.1.mrna1;Target=FBgn0030703.1 1 313 +
Chr1	stalkie_big_nohaplotig	CDS	146793347	146793519	.	-	2	Parent=FBgn0030703.1.mrna1;Target=FBgn0030703.1 467 639 +
Chr1	stalkie_big_nohaplotig	CDS	146793586	146793738	.	-	2	Parent=FBgn0030703.1.mrna1;Target=FBgn0030703.1 314 466 +
Chr1	stalkie_big_nohaplotig	CDS	146797450	146797762	.	-	0	Parent=FBgn0030703.1.mrna1;Target=FBgn0030703.1 1 313 +
Chr1	gffcl	locus	146881417	146882301	.	+	.	ID=RLOC_00012219;geneIDs=FBgn0035811.1.path2;transcripts=FBgn0035811.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	146881417	146882301	.	+	.	ID=FBgn0035811.1.mrna2;geneID=FBgn0035811.1.path2;Name=FBgn0035811.1;Dir=indeterminatecoverage=68.6;identity=99.9;matches=884;mismatches=1;indels=0;unknowns=0;Target=FBgn0035811.1 1290 406 .;locus=RLOC_00012219
Chr1	stalkie_big_nohaplotig	exon	146881417	146882301	99	+	.	Parent=FBgn0035811.1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	146881417	146882301	.	+	0	Parent=FBgn0035811.1.mrna2
Chr1	gffcl	locus	146882652	146882964	.	+	.	ID=RLOC_00012220;geneIDs=comp149868_c0_seq1.path1;transcripts=comp149868_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146882652	146882964	.	+	.	ID=comp149868_c0_seq1.mrna1;geneID=comp149868_c0_seq1.path1;Name=comp149868_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=310;mismatches=3;indels=0;unknowns=0;Target=comp149868_c0_seq1 313 1 .;CDS_Target=comp149868_c0_seq1 119 24 .;locus=RLOC_00012220
Chr1	stalkie_big_nohaplotig	exon	146882652	146882964	99	+	.	Parent=comp149868_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	146882675	146882770	.	+	0	Parent=comp149868_c0_seq1.mrna1
Chr1	gffcl	locus	146885382	146891312	.	-	.	ID=RLOC_00012221;geneIDs=FBgn0035812.1.path1;transcripts=FBgn0035812.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146885382	146891312	.	-	.	ID=FBgn0035812.1.mrna1;geneID=FBgn0035812.1.path1;Name=FBgn0035812.1;Dir=sensecoverage=100.0;identity=99.6;matches=4113;mismatches=17;indels=1;unknowns=0;Target=FBgn0035812.1 3 125 +;locus=RLOC_00012221
Chr1	stalkie_big_nohaplotig	exon	146885382	146886430	99	-	.	Parent=FBgn0035812.1.mrna1;Target=FBgn0035812.1 3083 4131 +
Chr1	stalkie_big_nohaplotig	exon	146886494	146886669	100	-	.	Parent=FBgn0035812.1.mrna1;Target=FBgn0035812.1 2907 3082 +
Chr1	stalkie_big_nohaplotig	exon	146886722	146887530	99	-	.	Parent=FBgn0035812.1.mrna1;Target=FBgn0035812.1 2098 2906 +
Chr1	stalkie_big_nohaplotig	exon	146887595	146888388	100	-	.	Parent=FBgn0035812.1.mrna1;Target=FBgn0035812.1 1304 2097 +
Chr1	stalkie_big_nohaplotig	exon	146888464	146888979	99	-	.	Parent=FBgn0035812.1.mrna1;Target=FBgn0035812.1 788 1303 +
Chr1	stalkie_big_nohaplotig	exon	146890399	146890829	99	-	.	Parent=FBgn0035812.1.mrna1;Target=FBgn0035812.1 357 787 +
Chr1	stalkie_big_nohaplotig	exon	146890896	146891067	98	-	.	Parent=FBgn0035812.1.mrna1;Target=FBgn0035812.1 185 356 +
Chr1	stalkie_big_nohaplotig	exon	146891130	146891312	98	-	.	Parent=FBgn0035812.1.mrna1;Target=FBgn0035812.1 1 184 +
Chr1	stalkie_big_nohaplotig	CDS	146891189	146891310	.	-	0	Parent=FBgn0035812.1.mrna1
Chr1	gffcl	locus	146924794	146927692	.	-	.	ID=RLOC_00012222;geneIDs=comp150690_c1_seq1.path1;transcripts=comp150690_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146924794	146927692	.	-	.	ID=comp150690_c1_seq1.mrna1;geneID=comp150690_c1_seq1.path1;Name=comp150690_c1_seq1;Dir=antisensecoverage=99.7;identity=98.9;matches=376;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012222
Chr1	stalkie_big_nohaplotig	exon	146924794	146925013	98	-	.	Parent=comp150690_c1_seq1.mrna1;Target=comp150690_c1_seq1 1 220 -
Chr1	stalkie_big_nohaplotig	exon	146927533	146927692	99	-	.	Parent=comp150690_c1_seq1.mrna1;Target=comp150690_c1_seq1 221 380 -
Chr1	stalkie_big_nohaplotig	CDS	146924921	146925013	.	-	0	Parent=comp150690_c1_seq1.mrna1;Target=comp150690_c1_seq1 128 220 .
Chr1	stalkie_big_nohaplotig	CDS	146927533	146927631	.	-	0	Parent=comp150690_c1_seq1.mrna1;Target=comp150690_c1_seq1 221 319 .
Chr1	gffcl	locus	146989021	146989754	.	+	.	ID=RLOC_00012223;geneIDs=comp155612_c0_seq1.path1;transcripts=comp155612_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146989021	146989754	.	+	.	ID=comp155612_c0_seq1.mrna1;geneID=comp155612_c0_seq1.path1;Name=comp155612_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.6;matches=731;mismatches=3;indels=0;unknowns=0;Target=comp155612_c0_seq1 734 1 .;CDS_Target=comp155612_c0_seq1 186 73 .;locus=RLOC_00012223
Chr1	stalkie_big_nohaplotig	exon	146989021	146989754	99	+	.	Parent=comp155612_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	146989093	146989206	.	+	0	Parent=comp155612_c0_seq1.mrna1
Chr1	gffcl	locus	146989895	146990539	.	-	.	ID=RLOC_00012224;geneIDs=comp142495_c0_seq1.path1;transcripts=comp142495_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	146989895	146990539	.	-	.	ID=comp142495_c0_seq1.mrna1;geneID=comp142495_c0_seq1.path1;Name=comp142495_c0_seq1;Dir=indeterminatecoverage=96.7;identity=99.8;matches=644;mismatches=1;indels=0;unknowns=0;Target=comp142495_c0_seq1 667 23 .;CDS_Target=comp142495_c0_seq1 666 541 .;locus=RLOC_00012224
Chr1	stalkie_big_nohaplotig	exon	146989895	146990539	99	-	.	Parent=comp142495_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	146989896	146990021	.	-	0	Parent=comp142495_c0_seq1.mrna1
Chr1	gffcl	locus	147024944	147037493	.	+	.	ID=RLOC_00012225;geneIDs=FBgn0032876.1.path1,comp117533_c0_seq1.path1,comp276923_c0_seq1.path1;transcripts=FBgn0032876.1.mrna1,comp276923_c0_seq1.mrna1,comp117533_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147024944	147037493	.	+	.	ID=FBgn0032876.1.mrna1;geneID=FBgn0032876.1.path1;Name=FBgn0032876.1;Dir=sensecoverage=93.2;identity=99.5;matches=2368;mismatches=13;indels=0;unknowns=0;locus=RLOC_00012225
Chr1	stalkie_big_nohaplotig	exon	147024944	147025056	100	+	.	Parent=FBgn0032876.1.mrna1;Target=FBgn0032876.1 176 288 +
Chr1	stalkie_big_nohaplotig	exon	147028883	147029031	100	+	.	Parent=FBgn0032876.1.mrna1;Target=FBgn0032876.1 289 437 +
Chr1	stalkie_big_nohaplotig	exon	147029126	147029339	100	+	.	Parent=FBgn0032876.1.mrna1;Target=FBgn0032876.1 438 651 +
Chr1	stalkie_big_nohaplotig	exon	147029400	147029646	99	+	.	Parent=FBgn0032876.1.mrna1;Target=FBgn0032876.1 652 898 +
Chr1	stalkie_big_nohaplotig	exon	147030689	147030788	98	+	.	Parent=FBgn0032876.1.mrna1;Target=FBgn0032876.1 899 998 +
Chr1	stalkie_big_nohaplotig	exon	147030860	147031058	100	+	.	Parent=FBgn0032876.1.mrna1;Target=FBgn0032876.1 999 1197 +
Chr1	stalkie_big_nohaplotig	exon	147036135	147037493	99	+	.	Parent=FBgn0032876.1.mrna1;Target=FBgn0032876.1 1198 2556 +
Chr1	stalkie_big_nohaplotig	CDS	147024946	147025056	.	+	0	Parent=FBgn0032876.1.mrna1;Target=FBgn0032876.1 178 288 +
Chr1	stalkie_big_nohaplotig	CDS	147028883	147029031	.	+	0	Parent=FBgn0032876.1.mrna1;Target=FBgn0032876.1 289 437 +
Chr1	stalkie_big_nohaplotig	CDS	147029126	147029339	.	+	1	Parent=FBgn0032876.1.mrna1;Target=FBgn0032876.1 438 651 +
Chr1	stalkie_big_nohaplotig	CDS	147029400	147029646	.	+	0	Parent=FBgn0032876.1.mrna1;Target=FBgn0032876.1 652 898 +
Chr1	stalkie_big_nohaplotig	CDS	147030689	147030788	.	+	2	Parent=FBgn0032876.1.mrna1;Target=FBgn0032876.1 899 998 +
Chr1	stalkie_big_nohaplotig	CDS	147030860	147031058	.	+	1	Parent=FBgn0032876.1.mrna1;Target=FBgn0032876.1 999 1197 +
Chr1	stalkie_big_nohaplotig	CDS	147036135	147037493	.	+	0	Parent=FBgn0032876.1.mrna1;Target=FBgn0032876.1 1198 2556 +
Chr1	stalkie_big_nohaplotig	mRNA	147031035	147031277	.	+	.	ID=comp276923_c0_seq1.mrna1;geneID=comp276923_c0_seq1.path1;Name=comp276923_c0_seq1;Dir=indeterminatecoverage=99.6;identity=93.6;matches=235;mismatches=0;indels=16;unknowns=0;Target=comp276923_c0_seq1 243 1 .;CDS_Target=comp276923_c0_seq1 78 1 .;locus=RLOC_00012225
Chr1	stalkie_big_nohaplotig	exon	147031035	147031277	93	+	.	Parent=comp276923_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147031035	147031112	.	+	0	Parent=comp276923_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147031980	147036157	.	+	.	ID=comp117533_c0_seq1.mrna1;geneID=comp117533_c0_seq1.path1;Name=comp117533_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=584;mismatches=1;indels=1;unknowns=0;Target=comp117533_c0_seq1 251 415 .;locus=RLOC_00012225
Chr1	stalkie_big_nohaplotig	exon	147031980	147032541	99	+	.	Parent=comp117533_c0_seq1.mrna1;Target=comp117533_c0_seq1 24 586 -
Chr1	stalkie_big_nohaplotig	exon	147036135	147036157	100	+	.	Parent=comp117533_c0_seq1.mrna1;Target=comp117533_c0_seq1 1 23 -
Chr1	stalkie_big_nohaplotig	CDS	147032151	147032315	.	+	0	Parent=comp117533_c0_seq1.mrna1
Chr1	gffcl	locus	147033400	147034728	.	+	.	ID=RLOC_00012226;geneIDs=comp160553_c0_seq1.path1;transcripts=comp160553_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147033400	147034728	.	+	.	ID=comp160553_c0_seq1.mrna1;geneID=comp160553_c0_seq1.path1;Name=comp160553_c0_seq1;Dir=indeterminatecoverage=99.3;identity=92.6;matches=1197;mismatches=42;indels=53;unknowns=0;Target=comp160553_c0_seq1 1077 1027 .;locus=RLOC_00012226
Chr1	stalkie_big_nohaplotig	exon	147033400	147034624	92	+	.	Parent=comp160553_c0_seq1.mrna1;Target=comp160553_c0_seq1 1225 10 .
Chr1	stalkie_big_nohaplotig	exon	147034684	147034728	97	+	.	Parent=comp160553_c0_seq1.mrna1;Target=comp160553_c0_seq1 1314 1270 .
Chr1	stalkie_big_nohaplotig	CDS	147034448	147034498	.	+	0	Parent=comp160553_c0_seq1.mrna1
Chr1	gffcl	locus	147056606	147059919	.	+	.	ID=RLOC_00012227;geneIDs=comp159247_c0_seq1.path1;transcripts=comp159247_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147056606	147059919	.	+	.	ID=comp159247_c0_seq1.mrna1;geneID=comp159247_c0_seq1.path1;Name=comp159247_c0_seq1;Dir=indeterminatecoverage=98.3;identity=96.7;matches=1137;mismatches=31;indels=8;unknowns=0;locus=RLOC_00012227
Chr1	stalkie_big_nohaplotig	exon	147056606	147056770	98	+	.	Parent=comp159247_c0_seq1.mrna1;Target=comp159247_c0_seq1 165 1 .
Chr1	stalkie_big_nohaplotig	exon	147057137	147057235	97	+	.	Parent=comp159247_c0_seq1.mrna1;Target=comp159247_c0_seq1 264 166 .
Chr1	stalkie_big_nohaplotig	exon	147057301	147057486	93	+	.	Parent=comp159247_c0_seq1.mrna1;Target=comp159247_c0_seq1 450 265 .
Chr1	stalkie_big_nohaplotig	exon	147057566	147057836	97	+	.	Parent=comp159247_c0_seq1.mrna1;Target=comp159247_c0_seq1 721 451 .
Chr1	stalkie_big_nohaplotig	exon	147058943	147059035	100	+	.	Parent=comp159247_c0_seq1.mrna1;Target=comp159247_c0_seq1 814 722 .
Chr1	stalkie_big_nohaplotig	exon	147059252	147059447	97	+	.	Parent=comp159247_c0_seq1.mrna1;Target=comp159247_c0_seq1 1010 815 .
Chr1	stalkie_big_nohaplotig	exon	147059697	147059768	89	+	.	Parent=comp159247_c0_seq1.mrna1;Target=comp159247_c0_seq1 1088 1011 .
Chr1	stalkie_big_nohaplotig	exon	147059833	147059919	97	+	.	Parent=comp159247_c0_seq1.mrna1;Target=comp159247_c0_seq1 1175 1089 .
Chr1	stalkie_big_nohaplotig	CDS	147058969	147059035	.	+	0	Parent=comp159247_c0_seq1.mrna1;Target=comp159247_c0_seq1 814 748 .
Chr1	stalkie_big_nohaplotig	CDS	147059252	147059292	.	+	2	Parent=comp159247_c0_seq1.mrna1;Target=comp159247_c0_seq1 855 815 .
Chr1	gffcl	locus	147069459	147070651	.	+	.	ID=RLOC_00012228;geneIDs=comp152155_c0_seq1.path1;transcripts=comp152155_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147069459	147070651	.	+	.	ID=comp152155_c0_seq1.mrna1;geneID=comp152155_c0_seq1.path1;Name=comp152155_c0_seq1;Dir=sensecoverage=99.6;identity=98.6;matches=788;mismatches=11;indels=0;unknowns=0;locus=RLOC_00012228
Chr1	stalkie_big_nohaplotig	exon	147069459	147069647	98	+	.	Parent=comp152155_c0_seq1.mrna1;Target=comp152155_c0_seq1 2 190 +
Chr1	stalkie_big_nohaplotig	exon	147069715	147069816	100	+	.	Parent=comp152155_c0_seq1.mrna1;Target=comp152155_c0_seq1 191 292 +
Chr1	stalkie_big_nohaplotig	exon	147070006	147070220	99	+	.	Parent=comp152155_c0_seq1.mrna1;Target=comp152155_c0_seq1 293 507 +
Chr1	stalkie_big_nohaplotig	exon	147070284	147070371	97	+	.	Parent=comp152155_c0_seq1.mrna1;Target=comp152155_c0_seq1 508 595 +
Chr1	stalkie_big_nohaplotig	exon	147070447	147070651	97	+	.	Parent=comp152155_c0_seq1.mrna1;Target=comp152155_c0_seq1 596 800 +
Chr1	stalkie_big_nohaplotig	CDS	147069587	147069647	.	+	0	Parent=comp152155_c0_seq1.mrna1;Target=comp152155_c0_seq1 130 190 +
Chr1	stalkie_big_nohaplotig	CDS	147069715	147069816	.	+	2	Parent=comp152155_c0_seq1.mrna1;Target=comp152155_c0_seq1 191 292 +
Chr1	stalkie_big_nohaplotig	CDS	147070006	147070220	.	+	2	Parent=comp152155_c0_seq1.mrna1;Target=comp152155_c0_seq1 293 507 +
Chr1	stalkie_big_nohaplotig	CDS	147070284	147070322	.	+	0	Parent=comp152155_c0_seq1.mrna1;Target=comp152155_c0_seq1 508 546 +
Chr1	gffcl	locus	147079044	147080515	.	+	.	ID=RLOC_00012229;geneIDs=comp160581_c0_seq1.path1;transcripts=comp160581_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147079044	147080515	.	+	.	ID=comp160581_c0_seq1.mrna1;geneID=comp160581_c0_seq1.path1;Name=comp160581_c0_seq1;Dir=sensecoverage=100.0;identity=93.3;matches=1182;mismatches=50;indels=35;unknowns=0;Target=comp160581_c0_seq1 558 776 +;locus=RLOC_00012229
Chr1	stalkie_big_nohaplotig	exon	147079044	147079248	95	+	.	Parent=comp160581_c0_seq1.mrna1;Target=comp160581_c0_seq1 1 206 +
Chr1	stalkie_big_nohaplotig	exon	147079480	147080515	92	+	.	Parent=comp160581_c0_seq1.mrna1;Target=comp160581_c0_seq1 207 1258 +
Chr1	stalkie_big_nohaplotig	CDS	147079812	147080028	.	+	0	Parent=comp160581_c0_seq1.mrna1
Chr1	gffcl	locus	147080552	147080946	.	+	.	ID=RLOC_00012230;geneIDs=comp152082_c0_seq1.path1;transcripts=comp152082_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147080552	147080946	.	+	.	ID=comp152082_c0_seq1.mrna1;geneID=comp152082_c0_seq1.path1;Name=comp152082_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=392;mismatches=3;indels=0;unknowns=0;Target=comp152082_c0_seq1 395 1 .;CDS_Target=comp152082_c0_seq1 137 63 .;locus=RLOC_00012230
Chr1	stalkie_big_nohaplotig	exon	147080552	147080946	99	+	.	Parent=comp152082_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147080614	147080688	.	+	0	Parent=comp152082_c0_seq1.mrna1
Chr1	gffcl	locus	147192528	147193005	.	+	.	ID=RLOC_00012232;geneIDs=comp157122_c0_seq1.path6;transcripts=comp157122_c0_seq1.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	147192528	147193005	.	+	.	ID=comp157122_c0_seq1.mrna6;geneID=comp157122_c0_seq1.path6;Name=comp157122_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=470;mismatches=8;indels=2;unknowns=0;Target=comp157122_c0_seq1 480 1 .;CDS_Target=comp157122_c0_seq1 480 244 .;locus=RLOC_00012232
Chr1	stalkie_big_nohaplotig	exon	147192528	147193005	97	+	.	Parent=comp157122_c0_seq1.mrna6
Chr1	stalkie_big_nohaplotig	CDS	147192769	147193005	.	+	0	Parent=comp157122_c0_seq1.mrna6
Chr1	gffcl	locus	147371960	147373154	.	+	.	ID=RLOC_00012235;geneIDs=comp159336_c0_seq1.path1;transcripts=comp159336_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147371960	147373154	.	+	.	ID=comp159336_c0_seq1.mrna1;geneID=comp159336_c0_seq1.path1;Name=comp159336_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.0;matches=1149;mismatches=42;indels=6;unknowns=0;Target=comp159336_c0_seq1 1193 1 .;CDS_Target=comp159336_c0_seq1 451 380 .;locus=RLOC_00012235
Chr1	stalkie_big_nohaplotig	exon	147371960	147373154	95	+	.	Parent=comp159336_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147372339	147372410	.	+	0	Parent=comp159336_c0_seq1.mrna1
Chr1	gffcl	locus	147373266	147373481	.	+	.	ID=RLOC_00012236;geneIDs=comp109792_c0_seq1.path1;transcripts=comp109792_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147373266	147373481	.	+	.	ID=comp109792_c0_seq1.mrna1;geneID=comp109792_c0_seq1.path1;Name=comp109792_c0_seq1;Dir=indeterminatecoverage=94.3;identity=99.5;matches=215;mismatches=1;indels=0;unknowns=0;Target=comp109792_c0_seq1 229 14 .;CDS_Target=comp109792_c0_seq1 56 15 .;locus=RLOC_00012236
Chr1	stalkie_big_nohaplotig	exon	147373266	147373481	99	+	.	Parent=comp109792_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147373267	147373308	.	+	0	Parent=comp109792_c0_seq1.mrna1
Chr1	gffcl	locus	147381205	147381969	.	-	.	ID=RLOC_00012237;geneIDs=comp154950_c0_seq1.path1;transcripts=comp154950_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147381205	147381969	.	-	.	ID=comp154950_c0_seq1.mrna1;geneID=comp154950_c0_seq1.path1;Name=comp154950_c0_seq1;Dir=antisensecoverage=100.0;identity=98.4;matches=693;mismatches=8;indels=3;unknowns=0;locus=RLOC_00012237
Chr1	stalkie_big_nohaplotig	exon	147381205	147381431	97	-	.	Parent=comp154950_c0_seq1.mrna1;Target=comp154950_c0_seq1 1 224 -
Chr1	stalkie_big_nohaplotig	exon	147381493	147381969	98	-	.	Parent=comp154950_c0_seq1.mrna1;Target=comp154950_c0_seq1 225 701 -
Chr1	stalkie_big_nohaplotig	CDS	147381345	147381431	.	-	0	Parent=comp154950_c0_seq1.mrna1;Target=comp154950_c0_seq1 138 224 .
Chr1	stalkie_big_nohaplotig	CDS	147381493	147381960	.	-	0	Parent=comp154950_c0_seq1.mrna1;Target=comp154950_c0_seq1 225 692 .
Chr1	gffcl	locus	147382974	147383437	.	+	.	ID=RLOC_00012238;geneIDs=comp144545_c0_seq1.path1;transcripts=comp144545_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147382974	147383437	.	+	.	ID=comp144545_c0_seq1.mrna1;geneID=comp144545_c0_seq1.path1;Name=comp144545_c0_seq1;Dir=sensecoverage=98.3;identity=98.8;matches=405;mismatches=5;indels=0;unknowns=0;locus=RLOC_00012238
Chr1	stalkie_big_nohaplotig	exon	147382974	147383127	98	+	.	Parent=comp144545_c0_seq1.mrna1;Target=comp144545_c0_seq1 2 155 +
Chr1	stalkie_big_nohaplotig	exon	147383182	147383437	98	+	.	Parent=comp144545_c0_seq1.mrna1;Target=comp144545_c0_seq1 156 411 +
Chr1	stalkie_big_nohaplotig	CDS	147382975	147383127	.	+	0	Parent=comp144545_c0_seq1.mrna1;Target=comp144545_c0_seq1 3 155 +
Chr1	stalkie_big_nohaplotig	CDS	147383182	147383436	.	+	0	Parent=comp144545_c0_seq1.mrna1;Target=comp144545_c0_seq1 156 410 +
Chr1	gffcl	locus	147404038	147408083	.	+	.	ID=RLOC_00012239;geneIDs=comp142930_c0_seq1.path1;transcripts=comp142930_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147404038	147408083	.	+	.	ID=comp142930_c0_seq1.mrna1;geneID=comp142930_c0_seq1.path1;Name=comp142930_c0_seq1;Dir=sensecoverage=99.9;identity=97.5;matches=836;mismatches=5;indels=16;unknowns=0;locus=RLOC_00012239
Chr1	stalkie_big_nohaplotig	exon	147404038	147404436	94	+	.	Parent=comp142930_c0_seq1.mrna1;Target=comp142930_c0_seq1 1 383 +
Chr1	stalkie_big_nohaplotig	exon	147404497	147404619	100	+	.	Parent=comp142930_c0_seq1.mrna1;Target=comp142930_c0_seq1 384 506 +
Chr1	stalkie_big_nohaplotig	exon	147407749	147408083	99	+	.	Parent=comp142930_c0_seq1.mrna1;Target=comp142930_c0_seq1 507 841 +
Chr1	stalkie_big_nohaplotig	CDS	147404222	147404436	.	+	0	Parent=comp142930_c0_seq1.mrna1;Target=comp142930_c0_seq1 169 383 +
Chr1	stalkie_big_nohaplotig	CDS	147404497	147404503	.	+	1	Parent=comp142930_c0_seq1.mrna1;Target=comp142930_c0_seq1 384 390 +
Chr1	gffcl	locus	147433744	147434336	.	+	.	ID=RLOC_00012240;geneIDs=comp113660_c0_seq1.path1;transcripts=comp113660_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147433744	147434336	.	+	.	ID=comp113660_c0_seq1.mrna1;geneID=comp113660_c0_seq1.path1;Name=comp113660_c0_seq1;Dir=indeterminatecoverage=99.7;identity=97.5;matches=580;mismatches=4;indels=11;unknowns=0;Target=comp113660_c0_seq1 588 3 .;CDS_Target=comp113660_c0_seq1 385 314 .;locus=RLOC_00012240
Chr1	stalkie_big_nohaplotig	exon	147433744	147434336	97	+	.	Parent=comp113660_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147434053	147434124	.	+	0	Parent=comp113660_c0_seq1.mrna1
Chr1	gffcl	locus	147435677	147436224	.	-	.	ID=RLOC_00012241;geneIDs=comp65387_c0_seq1.path1;transcripts=comp65387_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147435677	147436224	.	-	.	ID=comp65387_c0_seq1.mrna1;geneID=comp65387_c0_seq1.path1;Name=comp65387_c0_seq1;Dir=sensecoverage=97.8;identity=99.4;matches=475;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012241
Chr1	stalkie_big_nohaplotig	exon	147435677	147436050	99	-	.	Parent=comp65387_c0_seq1.mrna1;Target=comp65387_c0_seq1 114 487 +
Chr1	stalkie_big_nohaplotig	exon	147436121	147436224	98	-	.	Parent=comp65387_c0_seq1.mrna1;Target=comp65387_c0_seq1 10 113 +
Chr1	stalkie_big_nohaplotig	CDS	147435750	147436050	.	-	1	Parent=comp65387_c0_seq1.mrna1;Target=comp65387_c0_seq1 114 414 +
Chr1	stalkie_big_nohaplotig	CDS	147436121	147436161	.	-	0	Parent=comp65387_c0_seq1.mrna1;Target=comp65387_c0_seq1 73 113 +
Chr1	gffcl	locus	147470329	147471444	.	+	.	ID=RLOC_00012242;geneIDs=FBgn0034936.1.path1;transcripts=FBgn0034936.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147470329	147471444	.	+	.	ID=FBgn0034936.1.mrna1;geneID=FBgn0034936.1.path1;Name=FBgn0034936.1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1105;mismatches=11;indels=0;unknowns=0;Target=FBgn0034936.1 1116 1 .;locus=RLOC_00012242
Chr1	stalkie_big_nohaplotig	exon	147470329	147471444	99	+	.	Parent=FBgn0034936.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147470329	147471444	.	+	0	Parent=FBgn0034936.1.mrna1
Chr1	gffcl	locus	147475870	147480842	.	-	.	ID=RLOC_00012243;geneIDs=FBgn0031020.1.path1;transcripts=FBgn0031020.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147475870	147480842	.	-	.	ID=FBgn0031020.1.mrna1;geneID=FBgn0031020.1.path1;Name=FBgn0031020.1;Dir=sensecoverage=100.0;identity=99.5;matches=2605;mismatches=14;indels=0;unknowns=0;locus=RLOC_00012243
Chr1	stalkie_big_nohaplotig	exon	147475870	147476061	99	-	.	Parent=FBgn0031020.1.mrna1;Target=FBgn0031020.1 2428 2619 +
Chr1	stalkie_big_nohaplotig	exon	147477545	147478191	100	-	.	Parent=FBgn0031020.1.mrna1;Target=FBgn0031020.1 1781 2427 +
Chr1	stalkie_big_nohaplotig	exon	147478446	147478509	95	-	.	Parent=FBgn0031020.1.mrna1;Target=FBgn0031020.1 1717 1780 +
Chr1	stalkie_big_nohaplotig	exon	147478594	147478957	99	-	.	Parent=FBgn0031020.1.mrna1;Target=FBgn0031020.1 1353 1716 +
Chr1	stalkie_big_nohaplotig	exon	147479020	147479807	99	-	.	Parent=FBgn0031020.1.mrna1;Target=FBgn0031020.1 565 1352 +
Chr1	stalkie_big_nohaplotig	exon	147479884	147480372	99	-	.	Parent=FBgn0031020.1.mrna1;Target=FBgn0031020.1 76 564 +
Chr1	stalkie_big_nohaplotig	exon	147480768	147480842	100	-	.	Parent=FBgn0031020.1.mrna1;Target=FBgn0031020.1 1 75 +
Chr1	stalkie_big_nohaplotig	CDS	147475870	147476061	.	-	0	Parent=FBgn0031020.1.mrna1;Target=FBgn0031020.1 2428 2619 +
Chr1	stalkie_big_nohaplotig	CDS	147477545	147478191	.	-	2	Parent=FBgn0031020.1.mrna1;Target=FBgn0031020.1 1781 2427 +
Chr1	stalkie_big_nohaplotig	CDS	147478446	147478509	.	-	0	Parent=FBgn0031020.1.mrna1;Target=FBgn0031020.1 1717 1780 +
Chr1	stalkie_big_nohaplotig	CDS	147478594	147478957	.	-	1	Parent=FBgn0031020.1.mrna1;Target=FBgn0031020.1 1353 1716 +
Chr1	stalkie_big_nohaplotig	CDS	147479020	147479807	.	-	0	Parent=FBgn0031020.1.mrna1;Target=FBgn0031020.1 565 1352 +
Chr1	stalkie_big_nohaplotig	CDS	147479884	147480372	.	-	0	Parent=FBgn0031020.1.mrna1;Target=FBgn0031020.1 76 564 +
Chr1	stalkie_big_nohaplotig	CDS	147480768	147480842	.	-	0	Parent=FBgn0031020.1.mrna1;Target=FBgn0031020.1 1 75 +
Chr1	gffcl	locus	147483680	147488186	.	-	.	ID=RLOC_00012245;geneIDs=FBgn0051320.1.path1;transcripts=FBgn0051320.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147483680	147488186	.	-	.	ID=FBgn0051320.1.mrna1;geneID=FBgn0051320.1.path1;Name=FBgn0051320.1;Dir=sensecoverage=100.0;identity=99.1;matches=2842;mismatches=26;indels=0;unknowns=0;locus=RLOC_00012245
Chr1	stalkie_big_nohaplotig	exon	147483680	147483804	99	-	.	Parent=FBgn0051320.1.mrna1;Target=FBgn0051320.1 2744 2868 +
Chr1	stalkie_big_nohaplotig	exon	147483861	147484070	97	-	.	Parent=FBgn0051320.1.mrna1;Target=FBgn0051320.1 2534 2743 +
Chr1	stalkie_big_nohaplotig	exon	147484128	147484956	99	-	.	Parent=FBgn0051320.1.mrna1;Target=FBgn0051320.1 1705 2533 +
Chr1	stalkie_big_nohaplotig	exon	147486310	147486889	99	-	.	Parent=FBgn0051320.1.mrna1;Target=FBgn0051320.1 1125 1704 +
Chr1	stalkie_big_nohaplotig	exon	147486949	147487990	99	-	.	Parent=FBgn0051320.1.mrna1;Target=FBgn0051320.1 83 1124 +
Chr1	stalkie_big_nohaplotig	exon	147488105	147488186	98	-	.	Parent=FBgn0051320.1.mrna1;Target=FBgn0051320.1 1 82 +
Chr1	stalkie_big_nohaplotig	CDS	147483680	147483804	.	-	2	Parent=FBgn0051320.1.mrna1;Target=FBgn0051320.1 2744 2868 +
Chr1	stalkie_big_nohaplotig	CDS	147483861	147484070	.	-	2	Parent=FBgn0051320.1.mrna1;Target=FBgn0051320.1 2534 2743 +
Chr1	stalkie_big_nohaplotig	CDS	147484128	147484956	.	-	0	Parent=FBgn0051320.1.mrna1;Target=FBgn0051320.1 1705 2533 +
Chr1	stalkie_big_nohaplotig	CDS	147486310	147486889	.	-	1	Parent=FBgn0051320.1.mrna1;Target=FBgn0051320.1 1125 1704 +
Chr1	stalkie_big_nohaplotig	CDS	147486949	147487990	.	-	2	Parent=FBgn0051320.1.mrna1;Target=FBgn0051320.1 83 1124 +
Chr1	stalkie_big_nohaplotig	CDS	147488105	147488186	.	-	0	Parent=FBgn0051320.1.mrna1;Target=FBgn0051320.1 1 82 +
Chr1	gffcl	locus	147490888	147491455	.	+	.	ID=RLOC_00012246;geneIDs=comp93581_c0_seq1.path1;transcripts=comp93581_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147490888	147491455	.	+	.	ID=comp93581_c0_seq1.mrna1;geneID=comp93581_c0_seq1.path1;Name=comp93581_c0_seq1;Dir=indeterminatecoverage=97.9;identity=99.6;matches=566;mismatches=2;indels=0;unknowns=0;Target=comp93581_c0_seq1 568 1 .;CDS_Target=comp93581_c0_seq1 271 158 .;locus=RLOC_00012246
Chr1	stalkie_big_nohaplotig	exon	147490888	147491455	99	+	.	Parent=comp93581_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147491045	147491158	.	+	0	Parent=comp93581_c0_seq1.mrna1
Chr1	gffcl	locus	147492103	147580842	.	+	.	ID=RLOC_00012247;geneIDs=FBgn0052676.1.path1;transcripts=FBgn0052676.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147492103	147580842	.	+	.	ID=FBgn0052676.1.mrna1;geneID=FBgn0052676.1.path1;Name=FBgn0052676.1;Dir=sensecoverage=100.0;identity=99.6;matches=2998;mismatches=11;indels=0;unknowns=0;locus=RLOC_00012247
Chr1	stalkie_big_nohaplotig	exon	147492103	147492533	99	+	.	Parent=FBgn0052676.1.mrna1;Target=FBgn0052676.1 1 431 +
Chr1	stalkie_big_nohaplotig	exon	147546661	147546748	100	+	.	Parent=FBgn0052676.1.mrna1;Target=FBgn0052676.1 432 519 +
Chr1	stalkie_big_nohaplotig	exon	147577361	147579283	99	+	.	Parent=FBgn0052676.1.mrna1;Target=FBgn0052676.1 520 2442 +
Chr1	stalkie_big_nohaplotig	exon	147580276	147580842	100	+	.	Parent=FBgn0052676.1.mrna1;Target=FBgn0052676.1 2443 3009 +
Chr1	stalkie_big_nohaplotig	CDS	147492103	147492533	.	+	0	Parent=FBgn0052676.1.mrna1;Target=FBgn0052676.1 1 431 +
Chr1	stalkie_big_nohaplotig	CDS	147546661	147546748	.	+	1	Parent=FBgn0052676.1.mrna1;Target=FBgn0052676.1 432 519 +
Chr1	stalkie_big_nohaplotig	CDS	147577361	147579283	.	+	0	Parent=FBgn0052676.1.mrna1;Target=FBgn0052676.1 520 2442 +
Chr1	stalkie_big_nohaplotig	CDS	147580276	147580842	.	+	0	Parent=FBgn0052676.1.mrna1;Target=FBgn0052676.1 2443 3009 +
Chr1	gffcl	locus	147555748	149718409	.	.	.	ID=RLOC_00012248;geneIDs=ORF737.path1,FBgn0003463.1.path1,FBgn0004907.2.path1,FBgn0026206.1.path1,FBgn0030317.1.path1,comp159560_c0_seq1.path1,comp160444_c1_seq1.path1;transcripts=ORF737.mrna1,comp160444_c1_seq1.mrna1,FBgn0026206.1.mrna1,FBgn0030317.1.mrna1,comp159560_c0_seq1.mrna1,FBgn0003463.1.mrna1,FBgn0004907.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147555748	148225065	.	-	.	ID=ORF737.mrna1;geneID=ORF737.path1;Name=ORF737;Dir=sensecoverage=96.6;identity=99.9;matches=1424;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012248
Chr1	stalkie_big_nohaplotig	exon	147555748	147555756	100	-	.	Parent=ORF737.mrna1;Target=ORF737 1418 1426 +
Chr1	stalkie_big_nohaplotig	exon	148221601	148222639	99	-	.	Parent=ORF737.mrna1;Target=ORF737 379 1417 +
Chr1	stalkie_big_nohaplotig	exon	148224688	148225065	99	-	.	Parent=ORF737.mrna1;Target=ORF737 1 378 +
Chr1	stalkie_big_nohaplotig	CDS	147555748	147555756	.	-	2	Parent=ORF737.mrna1;Target=ORF737 1418 1426 +
Chr1	stalkie_big_nohaplotig	CDS	148221601	148222639	.	-	0	Parent=ORF737.mrna1;Target=ORF737 379 1417 +
Chr1	stalkie_big_nohaplotig	CDS	148224688	148225065	.	-	0	Parent=ORF737.mrna1;Target=ORF737 1 378 +
Chr1	stalkie_big_nohaplotig	mRNA	148071449	149718409	.	-	.	ID=comp160444_c1_seq1.mrna1;geneID=comp160444_c1_seq1.path1;Name=comp160444_c1_seq1;Dir=antisensecoverage=88.9;identity=95.3;matches=4743;mismatches=75;indels=159;unknowns=0;locus=RLOC_00012248
Chr1	stalkie_big_nohaplotig	exon	148071449	148072254	99	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 8 814 -
Chr1	stalkie_big_nohaplotig	exon	148072991	148073223	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 815 1047 -
Chr1	stalkie_big_nohaplotig	exon	148073295	148073458	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 1048 1211 -
Chr1	stalkie_big_nohaplotig	exon	148073514	148074054	99	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 1212 1752 -
Chr1	stalkie_big_nohaplotig	exon	148074630	148075875	99	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 1753 2998 -
Chr1	stalkie_big_nohaplotig	exon	148075942	148076400	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 2999 3457 -
Chr1	stalkie_big_nohaplotig	exon	148077323	148077506	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 3458 3641 -
Chr1	stalkie_big_nohaplotig	exon	148077605	148078035	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 3642 4072 -
Chr1	stalkie_big_nohaplotig	exon	148078497	148078716	97	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4073 4287 -
Chr1	stalkie_big_nohaplotig	exon	148203437	148203444	87	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4288 4295 -
Chr1	stalkie_big_nohaplotig	exon	148204368	148204373	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4296 4301 -
Chr1	stalkie_big_nohaplotig	exon	148206315	148206317	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4302 4304 -
Chr1	stalkie_big_nohaplotig	exon	148207845	148207849	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4305 4309 -
Chr1	stalkie_big_nohaplotig	exon	148219983	148219992	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4310 4319 -
Chr1	stalkie_big_nohaplotig	exon	148222235	148222242	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4368 4375 -
Chr1	stalkie_big_nohaplotig	exon	148227190	148227198	88	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4389 4397 -
Chr1	stalkie_big_nohaplotig	exon	148253577	148253644	56	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4398 4462 -
Chr1	stalkie_big_nohaplotig	exon	148254854	148254857	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4463 4466 -
Chr1	stalkie_big_nohaplotig	exon	148265797	148265812	61	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4467 4484 -
Chr1	stalkie_big_nohaplotig	exon	148266218	148266262	30	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4485 4611 -
Chr1	stalkie_big_nohaplotig	exon	148273376	148273396	51	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4612 4642 -
Chr1	stalkie_big_nohaplotig	exon	148274767	148274774	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4643 4650 -
Chr1	stalkie_big_nohaplotig	exon	148292741	148292754	78	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4651 4664 -
Chr1	stalkie_big_nohaplotig	exon	148292978	148292979	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4665 4666 -
Chr1	stalkie_big_nohaplotig	exon	148299372	148299373	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4667 4668 -
Chr1	stalkie_big_nohaplotig	exon	148314149	148314150	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4669 4670 -
Chr1	stalkie_big_nohaplotig	exon	148330037	148330041	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4671 4675 -
Chr1	stalkie_big_nohaplotig	exon	148335206	148335214	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4676 4684 -
Chr1	stalkie_big_nohaplotig	exon	148340878	148340885	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4685 4692 -
Chr1	stalkie_big_nohaplotig	exon	148343661	148343671	90	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4693 4703 -
Chr1	stalkie_big_nohaplotig	exon	148768159	148768166	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4704 4711 -
Chr1	stalkie_big_nohaplotig	exon	148772943	148772947	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4712 4716 -
Chr1	stalkie_big_nohaplotig	exon	148778712	148778717	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4717 4722 -
Chr1	stalkie_big_nohaplotig	exon	148785593	148785597	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4723 4727 -
Chr1	stalkie_big_nohaplotig	exon	148793699	148793705	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4728 4734 -
Chr1	stalkie_big_nohaplotig	exon	148794692	148794703	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4735 4746 -
Chr1	stalkie_big_nohaplotig	exon	148796262	148796273	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4747 4758 -
Chr1	stalkie_big_nohaplotig	exon	148799464	148799468	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4759 4763 -
Chr1	stalkie_big_nohaplotig	exon	148807364	148807370	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4764 4770 -
Chr1	stalkie_big_nohaplotig	exon	148814961	148814966	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4771 4776 -
Chr1	stalkie_big_nohaplotig	exon	148815083	148815092	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4777 4786 -
Chr1	stalkie_big_nohaplotig	exon	148822796	148822797	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4793 4794 -
Chr1	stalkie_big_nohaplotig	exon	148830857	148830860	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4795 4798 -
Chr1	stalkie_big_nohaplotig	exon	148838661	148838668	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4799 4806 -
Chr1	stalkie_big_nohaplotig	exon	148843462	148843465	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4807 4810 -
Chr1	stalkie_big_nohaplotig	exon	148847253	148847256	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4811 4814 -
Chr1	stalkie_big_nohaplotig	exon	148852032	148852043	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4815 4826 -
Chr1	stalkie_big_nohaplotig	exon	148858999	148859001	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4829 4831 -
Chr1	stalkie_big_nohaplotig	exon	148864821	148864831	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4832 4842 -
Chr1	stalkie_big_nohaplotig	exon	149657042	149657051	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4865 4874 -
Chr1	stalkie_big_nohaplotig	exon	149664991	149664997	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4875 4881 -
Chr1	stalkie_big_nohaplotig	exon	149665847	149665858	83	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4882 4892 -
Chr1	stalkie_big_nohaplotig	exon	149673715	149673716	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4893 4894 -
Chr1	stalkie_big_nohaplotig	exon	149693552	149693563	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4895 4906 -
Chr1	stalkie_big_nohaplotig	exon	149703218	149703272	37	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 4917 5008 -
Chr1	stalkie_big_nohaplotig	exon	149711914	149711921	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 5009 5016 -
Chr1	stalkie_big_nohaplotig	exon	149713119	149713150	56	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 5039 5066 -
Chr1	stalkie_big_nohaplotig	exon	149714802	149714803	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 5067 5068 -
Chr1	stalkie_big_nohaplotig	exon	149715417	149715421	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 5069 5073 -
Chr1	stalkie_big_nohaplotig	exon	149718399	149718409	100	-	.	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 5074 5084 -
Chr1	stalkie_big_nohaplotig	CDS	148072190	148072254	.	-	0	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 749 814 .
Chr1	stalkie_big_nohaplotig	CDS	148072991	148073223	.	-	2	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 815 1047 .
Chr1	stalkie_big_nohaplotig	CDS	148073295	148073458	.	-	1	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 1048 1211 .
Chr1	stalkie_big_nohaplotig	CDS	148073514	148074054	.	-	2	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 1212 1752 .
Chr1	stalkie_big_nohaplotig	CDS	148074630	148075875	.	-	0	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 1753 2998 .
Chr1	stalkie_big_nohaplotig	CDS	148075942	148076400	.	-	0	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 2999 3457 .
Chr1	stalkie_big_nohaplotig	CDS	148077323	148077506	.	-	1	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 3458 3641 .
Chr1	stalkie_big_nohaplotig	CDS	148077605	148077981	.	-	0	Parent=comp160444_c1_seq1.mrna1;Target=comp160444_c1_seq1 3642 4018 .
Chr1	stalkie_big_nohaplotig	mRNA	148072193	148077987	.	-	.	ID=FBgn0026206.1.mrna1;geneID=FBgn0026206.1.path1;Name=FBgn0026206.1;Dir=sensecoverage=100.0;identity=99.8;matches=3198;mismatches=5;indels=0;unknowns=0;locus=RLOC_00012248
Chr1	stalkie_big_nohaplotig	exon	148072193	148072254	100	-	.	Parent=FBgn0026206.1.mrna1;Target=FBgn0026206.1 3142 3203 +
Chr1	stalkie_big_nohaplotig	exon	148072991	148073223	100	-	.	Parent=FBgn0026206.1.mrna1;Target=FBgn0026206.1 2909 3141 +
Chr1	stalkie_big_nohaplotig	exon	148073295	148073458	100	-	.	Parent=FBgn0026206.1.mrna1;Target=FBgn0026206.1 2745 2908 +
Chr1	stalkie_big_nohaplotig	exon	148073514	148073985	99	-	.	Parent=FBgn0026206.1.mrna1;Target=FBgn0026206.1 2273 2744 +
Chr1	stalkie_big_nohaplotig	exon	148074630	148075875	99	-	.	Parent=FBgn0026206.1.mrna1;Target=FBgn0026206.1 1027 2272 +
Chr1	stalkie_big_nohaplotig	exon	148075942	148076400	100	-	.	Parent=FBgn0026206.1.mrna1;Target=FBgn0026206.1 568 1026 +
Chr1	stalkie_big_nohaplotig	exon	148077323	148077506	100	-	.	Parent=FBgn0026206.1.mrna1;Target=FBgn0026206.1 384 567 +
Chr1	stalkie_big_nohaplotig	exon	148077605	148077987	100	-	.	Parent=FBgn0026206.1.mrna1;Target=FBgn0026206.1 1 383 +
Chr1	stalkie_big_nohaplotig	CDS	148072195	148072254	.	-	0	Parent=FBgn0026206.1.mrna1;Target=FBgn0026206.1 3142 3201 +
Chr1	stalkie_big_nohaplotig	CDS	148072991	148073223	.	-	2	Parent=FBgn0026206.1.mrna1;Target=FBgn0026206.1 2909 3141 +
Chr1	stalkie_big_nohaplotig	CDS	148073295	148073458	.	-	1	Parent=FBgn0026206.1.mrna1;Target=FBgn0026206.1 2745 2908 +
Chr1	stalkie_big_nohaplotig	CDS	148073514	148073985	.	-	2	Parent=FBgn0026206.1.mrna1;Target=FBgn0026206.1 2273 2744 +
Chr1	stalkie_big_nohaplotig	CDS	148074630	148075875	.	-	0	Parent=FBgn0026206.1.mrna1;Target=FBgn0026206.1 1027 2272 +
Chr1	stalkie_big_nohaplotig	CDS	148075942	148076400	.	-	0	Parent=FBgn0026206.1.mrna1;Target=FBgn0026206.1 568 1026 +
Chr1	stalkie_big_nohaplotig	CDS	148077323	148077506	.	-	1	Parent=FBgn0026206.1.mrna1;Target=FBgn0026206.1 384 567 +
Chr1	stalkie_big_nohaplotig	CDS	148077605	148077987	.	-	0	Parent=FBgn0026206.1.mrna1;Target=FBgn0026206.1 1 383 +
Chr1	stalkie_big_nohaplotig	mRNA	148252830	148254275	.	-	.	ID=FBgn0030317.1.mrna1;geneID=FBgn0030317.1.path1;Name=FBgn0030317.1;Dir=sensecoverage=99.8;identity=99.6;matches=1265;mismatches=5;indels=0;unknowns=0;locus=RLOC_00012248
Chr1	stalkie_big_nohaplotig	exon	148252830	148253106	99	-	.	Parent=FBgn0030317.1.mrna1;Target=FBgn0030317.1 996 1272 +
Chr1	stalkie_big_nohaplotig	exon	148253161	148253333	100	-	.	Parent=FBgn0030317.1.mrna1;Target=FBgn0030317.1 823 995 +
Chr1	stalkie_big_nohaplotig	exon	148253393	148253923	99	-	.	Parent=FBgn0030317.1.mrna1;Target=FBgn0030317.1 292 822 +
Chr1	stalkie_big_nohaplotig	exon	148253987	148254275	100	-	.	Parent=FBgn0030317.1.mrna1;Target=FBgn0030317.1 3 291 +
Chr1	stalkie_big_nohaplotig	CDS	148252830	148253106	.	-	1	Parent=FBgn0030317.1.mrna1;Target=FBgn0030317.1 996 1272 +
Chr1	stalkie_big_nohaplotig	CDS	148253161	148253333	.	-	0	Parent=FBgn0030317.1.mrna1;Target=FBgn0030317.1 823 995 +
Chr1	stalkie_big_nohaplotig	CDS	148253393	148253923	.	-	0	Parent=FBgn0030317.1.mrna1;Target=FBgn0030317.1 292 822 +
Chr1	stalkie_big_nohaplotig	CDS	148253987	148254274	.	-	0	Parent=FBgn0030317.1.mrna1;Target=FBgn0030317.1 4 291 +
Chr1	stalkie_big_nohaplotig	mRNA	148329981	148331382	.	+	.	ID=comp159560_c0_seq1.mrna1;geneID=comp159560_c0_seq1.path1;Name=comp159560_c0_seq1;Dir=indeterminatecoverage=88.6;identity=87.0;matches=1268;mismatches=118;indels=71;unknowns=0;Target=comp159560_c0_seq1 1441 1 .;CDS_Target=comp159560_c0_seq1 534 526 .;locus=RLOC_00012248
Chr1	stalkie_big_nohaplotig	exon	148329981	148331382	87	+	.	Parent=comp159560_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148330517	148330525	.	+	0	Parent=comp159560_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148334250	148402400	.	-	.	ID=FBgn0003463.1.mrna1;geneID=FBgn0003463.1.path1;Name=FBgn0003463.1;Dir=sensecoverage=100.0;identity=99.9;matches=2652;mismatches=2;indels=1;unknowns=0;locus=RLOC_00012248
Chr1	stalkie_big_nohaplotig	exon	148334250	148336317	99	-	.	Parent=FBgn0003463.1.mrna1;Target=FBgn0003463.1 587 2655 +
Chr1	stalkie_big_nohaplotig	exon	148336530	148336595	100	-	.	Parent=FBgn0003463.1.mrna1;Target=FBgn0003463.1 521 586 +
Chr1	stalkie_big_nohaplotig	exon	148352032	148352164	100	-	.	Parent=FBgn0003463.1.mrna1;Target=FBgn0003463.1 388 520 +
Chr1	stalkie_big_nohaplotig	exon	148357657	148357766	100	-	.	Parent=FBgn0003463.1.mrna1;Target=FBgn0003463.1 278 387 +
Chr1	stalkie_big_nohaplotig	exon	148402124	148402400	99	-	.	Parent=FBgn0003463.1.mrna1;Target=FBgn0003463.1 1 277 +
Chr1	stalkie_big_nohaplotig	CDS	148334250	148336317	.	-	2	Parent=FBgn0003463.1.mrna1;Target=FBgn0003463.1 587 2655 +
Chr1	stalkie_big_nohaplotig	CDS	148336530	148336595	.	-	2	Parent=FBgn0003463.1.mrna1;Target=FBgn0003463.1 521 586 +
Chr1	stalkie_big_nohaplotig	CDS	148352032	148352164	.	-	0	Parent=FBgn0003463.1.mrna1;Target=FBgn0003463.1 388 520 +
Chr1	stalkie_big_nohaplotig	CDS	148357657	148357766	.	-	2	Parent=FBgn0003463.1.mrna1;Target=FBgn0003463.1 278 387 +
Chr1	stalkie_big_nohaplotig	CDS	148402124	148402400	.	-	0	Parent=FBgn0003463.1.mrna1;Target=FBgn0003463.1 1 277 +
Chr1	stalkie_big_nohaplotig	mRNA	149656286	149657142	.	-	.	ID=FBgn0004907.2.mrna1;geneID=FBgn0004907.2.path1;Name=FBgn0004907.2;Dir=indeterminatecoverage=100.0;identity=99.3;matches=851;mismatches=4;indels=2;unknowns=0;Target=FBgn0004907.2 855 1 .;CDS_Target=FBgn0004907.2 855 100 .;locus=RLOC_00012248
Chr1	stalkie_big_nohaplotig	exon	149656286	149657142	99	-	.	Parent=FBgn0004907.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	149656286	149657041	.	-	0	Parent=FBgn0004907.2.mrna1
Chr1	gffcl	locus	147582441	147583801	.	+	.	ID=RLOC_00012249;geneIDs=comp157684_c0_seq1.path1;transcripts=comp157684_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147582441	147583801	.	+	.	ID=comp157684_c0_seq1.mrna1;geneID=comp157684_c0_seq1.path1;Name=comp157684_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.0;matches=1313;mismatches=46;indels=38;unknowns=0;Target=comp157684_c0_seq1 1395 1 .;CDS_Target=comp157684_c0_seq1 529 356 .;locus=RLOC_00012249
Chr1	stalkie_big_nohaplotig	exon	147582441	147583801	93	+	.	Parent=comp157684_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147582763	147582934	.	+	0	Parent=comp157684_c0_seq1.mrna1
Chr1	gffcl	locus	147585579	147586534	.	.	.	ID=RLOC_00012250;geneIDs=comp151246_c0_seq1.path1,comp154736_c0_seq1.path1;transcripts=comp151246_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147585976	147586534	.	+	.	ID=comp151246_c0_seq1.mrna1;geneID=comp151246_c0_seq1.path1;Name=comp151246_c0_seq1;Dir=indeterminatecoverage=94.9;identity=97.5;matches=545;mismatches=14;indels=0;unknowns=0;Target=comp151246_c0_seq1 559 1 .;CDS_Target=comp151246_c0_seq1 261 130 .;locus=RLOC_00012250
Chr1	stalkie_big_nohaplotig	exon	147585976	147586534	97	+	.	Parent=comp151246_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147586105	147586236	.	+	0	Parent=comp151246_c0_seq1.mrna1
Chr1	gffcl	locus	147586978	147587257	.	-	.	ID=RLOC_00012251;geneIDs=comp135316_c0_seq1.path1;transcripts=comp135316_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147586978	147587257	.	-	.	ID=comp135316_c0_seq1.mrna1;geneID=comp135316_c0_seq1.path1;Name=comp135316_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=279;mismatches=1;indels=0;unknowns=0;Target=comp135316_c0_seq1 280 1 .;CDS_Target=comp135316_c0_seq1 196 2 .;locus=RLOC_00012251
Chr1	stalkie_big_nohaplotig	exon	147586978	147587257	99	-	.	Parent=comp135316_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147587062	147587256	.	-	0	Parent=comp135316_c0_seq1.mrna1
Chr1	gffcl	locus	147587540	147587975	.	+	.	ID=RLOC_00012252;geneIDs=comp147502_c0_seq1.path1;transcripts=comp147502_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147587540	147587975	.	+	.	ID=comp147502_c0_seq1.mrna1;geneID=comp147502_c0_seq1.path1;Name=comp147502_c0_seq1;Dir=indeterminatecoverage=98.6;identity=97.2;matches=424;mismatches=5;indels=7;unknowns=0;Target=comp147502_c0_seq1 435 7 .;CDS_Target=comp147502_c0_seq1 65 9 .;locus=RLOC_00012252
Chr1	stalkie_big_nohaplotig	exon	147587540	147587975	97	+	.	Parent=comp147502_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147587542	147587598	.	+	0	Parent=comp147502_c0_seq1.mrna1
Chr1	gffcl	locus	147587988	147588672	.	+	.	ID=RLOC_00012253;geneIDs=comp156180_c0_seq1.path1;transcripts=comp156180_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147587988	147588672	.	+	.	ID=comp156180_c0_seq1.mrna1;geneID=comp156180_c0_seq1.path1;Name=comp156180_c0_seq1;Dir=indeterminatecoverage=79.8;identity=99.1;matches=681;mismatches=4;indels=2;unknowns=0;Target=comp156180_c0_seq1 861 175 .;CDS_Target=comp156180_c0_seq1 274 176 .;locus=RLOC_00012253
Chr1	stalkie_big_nohaplotig	exon	147587988	147588672	99	+	.	Parent=comp156180_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147587989	147588086	.	+	0	Parent=comp156180_c0_seq1.mrna1
Chr1	gffcl	locus	147591236	147591662	.	+	.	ID=RLOC_00012254;geneIDs=comp156180_c0_seq1.path2;transcripts=comp156180_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	147591236	147591662	.	+	.	ID=comp156180_c0_seq1.mrna2;geneID=comp156180_c0_seq1.path2;Name=comp156180_c0_seq1;Dir=indeterminatecoverage=49.6;identity=99.5;matches=425;mismatches=2;indels=0;unknowns=0;Target=comp156180_c0_seq1 861 435 .;CDS_Target=comp156180_c0_seq1 859 770 .;locus=RLOC_00012254
Chr1	stalkie_big_nohaplotig	exon	147591236	147591662	99	+	.	Parent=comp156180_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	147591571	147591660	.	+	0	Parent=comp156180_c0_seq1.mrna2
Chr1	gffcl	locus	147599835	147600413	.	+	.	ID=RLOC_00012256;geneIDs=Dp_FBgn0246689.1.path1;transcripts=Dp_FBgn0246689.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147599835	147600413	.	+	.	ID=Dp_FBgn0246689.1.mrna1;geneID=Dp_FBgn0246689.1.path1;Name=Dp_FBgn0246689.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=575;mismatches=4;indels=0;unknowns=0;Target=Dp_FBgn0246689.1 579 1 .;locus=RLOC_00012256
Chr1	stalkie_big_nohaplotig	exon	147599835	147600413	99	+	.	Parent=Dp_FBgn0246689.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147599835	147600413	.	+	0	Parent=Dp_FBgn0246689.1.mrna1
Chr1	gffcl	locus	147607881	147608515	.	-	.	ID=RLOC_00012257;geneIDs=comp149355_c0_seq1.path1;transcripts=comp149355_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147607881	147608515	.	-	.	ID=comp149355_c0_seq1.mrna1;geneID=comp149355_c0_seq1.path1;Name=comp149355_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.6;matches=598;mismatches=21;indels=0;unknowns=0;Target=comp149355_c0_seq1 98 94 .;locus=RLOC_00012257
Chr1	stalkie_big_nohaplotig	exon	147607881	147608401	96	-	.	Parent=comp149355_c0_seq1.mrna1;Target=comp149355_c0_seq1 863 343 .
Chr1	stalkie_big_nohaplotig	exon	147608418	147608515	96	-	.	Parent=comp149355_c0_seq1.mrna1;Target=comp149355_c0_seq1 98 1 .
Chr1	stalkie_big_nohaplotig	CDS	147608418	147608422	.	-	0	Parent=comp149355_c0_seq1.mrna1
Chr1	gffcl	locus	147627506	147628360	.	-	.	ID=RLOC_00012258;geneIDs=FBgn0034963.1.path1;transcripts=FBgn0034963.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147627506	147628360	.	-	.	ID=FBgn0034963.1.mrna1;geneID=FBgn0034963.1.path1;Name=FBgn0034963.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=849;mismatches=6;indels=0;unknowns=0;Target=FBgn0034963.1 855 1 .;locus=RLOC_00012258
Chr1	stalkie_big_nohaplotig	exon	147627506	147628360	99	-	.	Parent=FBgn0034963.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147627506	147628360	.	-	0	Parent=FBgn0034963.1.mrna1
Chr1	gffcl	locus	147631489	147632444	.	+	.	ID=RLOC_00012259;geneIDs=FBgn0042132.1.path1;transcripts=FBgn0042132.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147631489	147632444	.	+	.	ID=FBgn0042132.1.mrna1;geneID=FBgn0042132.1.path1;Name=FBgn0042132.1;Dir=indeterminatecoverage=99.0;identity=98.8;matches=945;mismatches=11;indels=0;unknowns=0;Target=FBgn0042132.1 966 11 .;CDS_Target=FBgn0042132.1 966 13 .;locus=RLOC_00012259
Chr1	stalkie_big_nohaplotig	exon	147631489	147632444	98	+	.	Parent=FBgn0042132.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147631491	147632444	.	+	0	Parent=FBgn0042132.1.mrna1
Chr1	gffcl	locus	147632849	147633114	.	+	.	ID=RLOC_00012260;geneIDs=FBgn0031066.1.path1;transcripts=FBgn0031066.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147632849	147633114	.	+	.	ID=FBgn0031066.1.mrna1;geneID=FBgn0031066.1.path1;Name=FBgn0031066.1;Dir=indeterminatecoverage=98.5;identity=100.0;matches=266;mismatches=0;indels=0;unknowns=0;Target=FBgn0031066.1 270 5 .;CDS_Target=FBgn0031066.1 270 7 .;locus=RLOC_00012260
Chr1	stalkie_big_nohaplotig	exon	147632849	147633114	100	+	.	Parent=FBgn0031066.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147632851	147633114	.	+	0	Parent=FBgn0031066.1.mrna1
Chr1	gffcl	locus	147636205	147637047	.	-	.	ID=RLOC_00012261;geneIDs=FBgn0031068.1.path1;transcripts=FBgn0031068.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147636205	147637047	.	-	.	ID=FBgn0031068.1.mrna1;geneID=FBgn0031068.1.path1;Name=FBgn0031068.1;Dir=sensecoverage=100.0;identity=99.4;matches=614;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012261
Chr1	stalkie_big_nohaplotig	exon	147636205	147636364	99	-	.	Parent=FBgn0031068.1.mrna1;Target=FBgn0031068.1 459 618 +
Chr1	stalkie_big_nohaplotig	exon	147636537	147636757	98	-	.	Parent=FBgn0031068.1.mrna1;Target=FBgn0031068.1 238 458 +
Chr1	stalkie_big_nohaplotig	exon	147636811	147637047	100	-	.	Parent=FBgn0031068.1.mrna1;Target=FBgn0031068.1 1 237 +
Chr1	stalkie_big_nohaplotig	CDS	147636205	147636364	.	-	1	Parent=FBgn0031068.1.mrna1;Target=FBgn0031068.1 459 618 +
Chr1	stalkie_big_nohaplotig	CDS	147636537	147636757	.	-	0	Parent=FBgn0031068.1.mrna1;Target=FBgn0031068.1 238 458 +
Chr1	stalkie_big_nohaplotig	CDS	147636811	147637047	.	-	0	Parent=FBgn0031068.1.mrna1;Target=FBgn0031068.1 1 237 +
Chr1	gffcl	locus	147661667	149634061	.	-	.	ID=RLOC_00012262;geneIDs=comp140514_c0_seq1.path1;transcripts=comp140514_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147661667	149634061	.	-	.	ID=comp140514_c0_seq1.mrna1;geneID=comp140514_c0_seq1.path1;Name=comp140514_c0_seq1;Dir=indeterminatecoverage=72.7;identity=96.2;matches=410;mismatches=10;indels=6;unknowns=0;Target=comp140514_c0_seq1 71 33 .;locus=RLOC_00012262
Chr1	stalkie_big_nohaplotig	exon	147661667	147661678	83	-	.	Parent=comp140514_c0_seq1.mrna1;Target=comp140514_c0_seq1 432 421 .
Chr1	stalkie_big_nohaplotig	exon	147679815	147679821	100	-	.	Parent=comp140514_c0_seq1.mrna1;Target=comp140514_c0_seq1 420 414 .
Chr1	stalkie_big_nohaplotig	exon	147683444	147683451	100	-	.	Parent=comp140514_c0_seq1.mrna1;Target=comp140514_c0_seq1 413 406 .
Chr1	stalkie_big_nohaplotig	exon	147697094	147697097	100	-	.	Parent=comp140514_c0_seq1.mrna1;Target=comp140514_c0_seq1 405 402 .
Chr1	stalkie_big_nohaplotig	exon	147703647	147703648	100	-	.	Parent=comp140514_c0_seq1.mrna1;Target=comp140514_c0_seq1 401 400 .
Chr1	stalkie_big_nohaplotig	exon	147707796	147707798	100	-	.	Parent=comp140514_c0_seq1.mrna1;Target=comp140514_c0_seq1 399 397 .
Chr1	stalkie_big_nohaplotig	exon	147723545	147723552	100	-	.	Parent=comp140514_c0_seq1.mrna1;Target=comp140514_c0_seq1 396 389 .
Chr1	stalkie_big_nohaplotig	exon	147731217	147731222	100	-	.	Parent=comp140514_c0_seq1.mrna1;Target=comp140514_c0_seq1 382 377 .
Chr1	stalkie_big_nohaplotig	exon	147738547	147738557	100	-	.	Parent=comp140514_c0_seq1.mrna1;Target=comp140514_c0_seq1 376 366 .
Chr1	stalkie_big_nohaplotig	exon	147743018	147743027	100	-	.	Parent=comp140514_c0_seq1.mrna1;Target=comp140514_c0_seq1 365 356 .
Chr1	stalkie_big_nohaplotig	exon	147755704	147755709	100	-	.	Parent=comp140514_c0_seq1.mrna1;Target=comp140514_c0_seq1 355 350 .
Chr1	stalkie_big_nohaplotig	exon	147759160	147759163	100	-	.	Parent=comp140514_c0_seq1.mrna1;Target=comp140514_c0_seq1 349 346 .
Chr1	stalkie_big_nohaplotig	exon	147772513	147772515	100	-	.	Parent=comp140514_c0_seq1.mrna1;Target=comp140514_c0_seq1 345 343 .
Chr1	stalkie_big_nohaplotig	exon	147794928	147794930	100	-	.	Parent=comp140514_c0_seq1.mrna1;Target=comp140514_c0_seq1 342 340 .
Chr1	stalkie_big_nohaplotig	exon	147798158	147798167	100	-	.	Parent=comp140514_c0_seq1.mrna1;Target=comp140514_c0_seq1 339 330 .
Chr1	stalkie_big_nohaplotig	exon	147803030	147803032	100	-	.	Parent=comp140514_c0_seq1.mrna1;Target=comp140514_c0_seq1 329 327 .
Chr1	stalkie_big_nohaplotig	exon	147809501	147809503	100	-	.	Parent=comp140514_c0_seq1.mrna1;Target=comp140514_c0_seq1 326 324 .
Chr1	stalkie_big_nohaplotig	exon	147815488	147815492	100	-	.	Parent=comp140514_c0_seq1.mrna1;Target=comp140514_c0_seq1 323 319 .
Chr1	stalkie_big_nohaplotig	exon	147817290	147817294	100	-	.	Parent=comp140514_c0_seq1.mrna1;Target=comp140514_c0_seq1 318 314 .
Chr1	stalkie_big_nohaplotig	exon	149633755	149634061	95	-	.	Parent=comp140514_c0_seq1.mrna1;Target=comp140514_c0_seq1 313 1 .
Chr1	stalkie_big_nohaplotig	CDS	149633991	149634029	.	-	0	Parent=comp140514_c0_seq1.mrna1
Chr1	gffcl	locus	147690590	147693668	.	+	.	ID=RLOC_00012263;geneIDs=comp148961_c0_seq1.path1;transcripts=comp148961_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147690590	147693668	.	+	.	ID=comp148961_c0_seq1.mrna1;geneID=comp148961_c0_seq1.path1;Name=comp148961_c0_seq1;Dir=indeterminatecoverage=100.0;identity=80.4;matches=263;mismatches=28;indels=36;unknowns=0;locus=RLOC_00012263
Chr1	stalkie_big_nohaplotig	exon	147690590	147690617	96	+	.	Parent=comp148961_c0_seq1.mrna1;Target=comp148961_c0_seq1 28 1 .
Chr1	stalkie_big_nohaplotig	exon	147690828	147690908	85	+	.	Parent=comp148961_c0_seq1.mrna1;Target=comp148961_c0_seq1 109 29 .
Chr1	stalkie_big_nohaplotig	exon	147691118	147691134	94	+	.	Parent=comp148961_c0_seq1.mrna1;Target=comp148961_c0_seq1 126 110 .
Chr1	stalkie_big_nohaplotig	exon	147692152	147692199	77	+	.	Parent=comp148961_c0_seq1.mrna1;Target=comp148961_c0_seq1 165 127 .
Chr1	stalkie_big_nohaplotig	exon	147692850	147692876	92	+	.	Parent=comp148961_c0_seq1.mrna1;Target=comp148961_c0_seq1 197 171 .
Chr1	stalkie_big_nohaplotig	exon	147693282	147693316	48	+	.	Parent=comp148961_c0_seq1.mrna1;Target=comp148961_c0_seq1 259 198 .
Chr1	stalkie_big_nohaplotig	exon	147693524	147693538	100	+	.	Parent=comp148961_c0_seq1.mrna1;Target=comp148961_c0_seq1 274 260 .
Chr1	stalkie_big_nohaplotig	exon	147693620	147693668	89	+	.	Parent=comp148961_c0_seq1.mrna1;Target=comp148961_c0_seq1 323 275 .
Chr1	stalkie_big_nohaplotig	CDS	147690590	147690617	.	+	0	Parent=comp148961_c0_seq1.mrna1;Target=comp148961_c0_seq1 28 1 .
Chr1	stalkie_big_nohaplotig	CDS	147690828	147690908	.	+	2	Parent=comp148961_c0_seq1.mrna1;Target=comp148961_c0_seq1 109 29 .
Chr1	stalkie_big_nohaplotig	CDS	147691118	147691134	.	+	2	Parent=comp148961_c0_seq1.mrna1;Target=comp148961_c0_seq1 126 110 .
Chr1	stalkie_big_nohaplotig	CDS	147692152	147692199	.	+	0	Parent=comp148961_c0_seq1.mrna1;Target=comp148961_c0_seq1 165 127 .
Chr1	stalkie_big_nohaplotig	CDS	147692850	147692876	.	+	0	Parent=comp148961_c0_seq1.mrna1;Target=comp148961_c0_seq1 197 171 .
Chr1	stalkie_big_nohaplotig	CDS	147693282	147693316	.	+	0	Parent=comp148961_c0_seq1.mrna1;Target=comp148961_c0_seq1 259 198 .
Chr1	stalkie_big_nohaplotig	CDS	147693524	147693538	.	+	1	Parent=comp148961_c0_seq1.mrna1;Target=comp148961_c0_seq1 274 260 .
Chr1	stalkie_big_nohaplotig	CDS	147693620	147693666	.	+	1	Parent=comp148961_c0_seq1.mrna1;Target=comp148961_c0_seq1 321 275 .
Chr1	gffcl	locus	147726838	147733519	.	+	.	ID=RLOC_00012264;geneIDs=FBgn0259224.1.path1;transcripts=FBgn0259224.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147726838	147733519	.	+	.	ID=FBgn0259224.1.mrna1;geneID=FBgn0259224.1.path1;Name=FBgn0259224.1;Dir=sensecoverage=86.6;identity=98.8;matches=2440;mismatches=8;indels=21;unknowns=0;locus=RLOC_00012264
Chr1	stalkie_big_nohaplotig	exon	147726838	147726921	100	+	.	Parent=FBgn0259224.1.mrna1;Target=FBgn0259224.1 379 462 +
Chr1	stalkie_big_nohaplotig	exon	147727119	147727323	100	+	.	Parent=FBgn0259224.1.mrna1;Target=FBgn0259224.1 463 667 +
Chr1	stalkie_big_nohaplotig	exon	147731272	147732380	99	+	.	Parent=FBgn0259224.1.mrna1;Target=FBgn0259224.1 668 1776 +
Chr1	stalkie_big_nohaplotig	exon	147732449	147733519	97	+	.	Parent=FBgn0259224.1.mrna1;Target=FBgn0259224.1 1777 2826 +
Chr1	stalkie_big_nohaplotig	CDS	147726838	147726921	.	+	0	Parent=FBgn0259224.1.mrna1;Target=FBgn0259224.1 379 462 +
Chr1	stalkie_big_nohaplotig	CDS	147727119	147727323	.	+	0	Parent=FBgn0259224.1.mrna1;Target=FBgn0259224.1 463 667 +
Chr1	stalkie_big_nohaplotig	CDS	147731272	147732380	.	+	2	Parent=FBgn0259224.1.mrna1;Target=FBgn0259224.1 668 1776 +
Chr1	stalkie_big_nohaplotig	CDS	147732449	147733519	.	+	0	Parent=FBgn0259224.1.mrna1;Target=FBgn0259224.1 1777 2826 +
Chr1	gffcl	locus	147729420	147730047	.	+	.	ID=RLOC_00012265;geneIDs=comp147577_c0_seq1.path1;transcripts=comp147577_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147729420	147730047	.	+	.	ID=comp147577_c0_seq1.mrna1;geneID=comp147577_c0_seq1.path1;Name=comp147577_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=618;mismatches=10;indels=0;unknowns=0;Target=comp147577_c0_seq1 628 1 .;CDS_Target=comp147577_c0_seq1 576 451 .;locus=RLOC_00012265
Chr1	stalkie_big_nohaplotig	exon	147729420	147730047	98	+	.	Parent=comp147577_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147729870	147729995	.	+	0	Parent=comp147577_c0_seq1.mrna1
Chr1	gffcl	locus	147730148	147730710	.	-	.	ID=RLOC_00012266;geneIDs=comp153686_c0_seq1.path1;transcripts=comp153686_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147730148	147730710	.	-	.	ID=comp153686_c0_seq1.mrna1;geneID=comp153686_c0_seq1.path1;Name=comp153686_c0_seq1;Dir=antisensecoverage=100.0;identity=92.1;matches=453;mismatches=38;indels=1;unknowns=0;Target=comp153686_c0_seq1 216 335 .;locus=RLOC_00012266
Chr1	stalkie_big_nohaplotig	exon	147730148	147730247	78	-	.	Parent=comp153686_c0_seq1.mrna1;Target=comp153686_c0_seq1 1 100 -
Chr1	stalkie_big_nohaplotig	exon	147730319	147730710	95	-	.	Parent=comp153686_c0_seq1.mrna1;Target=comp153686_c0_seq1 101 491 -
Chr1	stalkie_big_nohaplotig	CDS	147730435	147730554	.	-	0	Parent=comp153686_c0_seq1.mrna1
Chr1	gffcl	locus	147735190	147735507	.	-	.	ID=RLOC_00012267;geneIDs=comp151542_c0_seq1.path1;transcripts=comp151542_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147735190	147735507	.	-	.	ID=comp151542_c0_seq1.mrna1;geneID=comp151542_c0_seq1.path1;Name=comp151542_c0_seq1;Dir=indeterminatecoverage=88.5;identity=98.1;matches=312;mismatches=5;indels=1;unknowns=0;Target=comp151542_c0_seq1 317 1 .;CDS_Target=comp151542_c0_seq1 104 3 .;locus=RLOC_00012267
Chr1	stalkie_big_nohaplotig	exon	147735190	147735507	98	-	.	Parent=comp151542_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147735404	147735505	.	-	0	Parent=comp151542_c0_seq1.mrna1
Chr1	gffcl	locus	147736240	147751073	.	+	.	ID=RLOC_00012268;geneIDs=FBgn0043903.2.path1;transcripts=FBgn0043903.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147736240	147751073	.	+	.	ID=FBgn0043903.2.mrna1;geneID=FBgn0043903.2.path1;Name=FBgn0043903.2;Dir=sensecoverage=100.0;identity=99.3;matches=3601;mismatches=26;indels=0;unknowns=0;locus=RLOC_00012268
Chr1	stalkie_big_nohaplotig	exon	147736240	147736271	100	+	.	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 1 32 +
Chr1	stalkie_big_nohaplotig	exon	147743084	147743166	100	+	.	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 33 115 +
Chr1	stalkie_big_nohaplotig	exon	147743272	147743423	98	+	.	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 116 267 +
Chr1	stalkie_big_nohaplotig	exon	147743533	147743647	99	+	.	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 268 382 +
Chr1	stalkie_big_nohaplotig	exon	147743738	147743868	99	+	.	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 383 513 +
Chr1	stalkie_big_nohaplotig	exon	147746819	147746990	100	+	.	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 514 685 +
Chr1	stalkie_big_nohaplotig	exon	147747064	147747541	100	+	.	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 686 1163 +
Chr1	stalkie_big_nohaplotig	exon	147747615	147747918	99	+	.	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 1164 1467 +
Chr1	stalkie_big_nohaplotig	exon	147747992	147748475	99	+	.	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 1468 1951 +
Chr1	stalkie_big_nohaplotig	exon	147748544	147748655	98	+	.	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 1952 2063 +
Chr1	stalkie_big_nohaplotig	exon	147749385	147749575	98	+	.	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 2064 2254 +
Chr1	stalkie_big_nohaplotig	exon	147749637	147750832	99	+	.	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 2255 3450 +
Chr1	stalkie_big_nohaplotig	exon	147750897	147751073	99	+	.	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 3451 3627 +
Chr1	stalkie_big_nohaplotig	CDS	147736240	147736271	.	+	0	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 1 32 +
Chr1	stalkie_big_nohaplotig	CDS	147743084	147743166	.	+	1	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 33 115 +
Chr1	stalkie_big_nohaplotig	CDS	147743272	147743423	.	+	2	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 116 267 +
Chr1	stalkie_big_nohaplotig	CDS	147743533	147743647	.	+	0	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 268 382 +
Chr1	stalkie_big_nohaplotig	CDS	147743738	147743868	.	+	2	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 383 513 +
Chr1	stalkie_big_nohaplotig	CDS	147746819	147746990	.	+	0	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 514 685 +
Chr1	stalkie_big_nohaplotig	CDS	147747064	147747541	.	+	2	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 686 1163 +
Chr1	stalkie_big_nohaplotig	CDS	147747615	147747918	.	+	1	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 1164 1467 +
Chr1	stalkie_big_nohaplotig	CDS	147747992	147748475	.	+	0	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 1468 1951 +
Chr1	stalkie_big_nohaplotig	CDS	147748544	147748655	.	+	2	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 1952 2063 +
Chr1	stalkie_big_nohaplotig	CDS	147749385	147749575	.	+	1	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 2064 2254 +
Chr1	stalkie_big_nohaplotig	CDS	147749637	147750832	.	+	2	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 2255 3450 +
Chr1	stalkie_big_nohaplotig	CDS	147750897	147751073	.	+	0	Parent=FBgn0043903.2.mrna1;Target=FBgn0043903.2 3451 3627 +
Chr1	gffcl	locus	147745010	147746238	.	+	.	ID=RLOC_00012269;geneIDs=comp158963_c0_seq1.path1;transcripts=comp158963_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147745010	147746238	.	+	.	ID=comp158963_c0_seq1.mrna1;geneID=comp158963_c0_seq1.path1;Name=comp158963_c0_seq1;Dir=indeterminatecoverage=99.9;identity=86.0;matches=1153;mismatches=40;indels=147;unknowns=0;Target=comp158963_c0_seq1 1304 1 .;CDS_Target=comp158963_c0_seq1 1032 886 .;locus=RLOC_00012269
Chr1	stalkie_big_nohaplotig	exon	147745010	147746238	86	+	.	Parent=comp158963_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147745867	147746016	.	+	0	Parent=comp158963_c0_seq1.mrna1
Chr1	gffcl	locus	147753478	147757076	.	.	.	ID=RLOC_00012270;geneIDs=FBgn0023509.path1,comp147703_c0_seq1.path1;transcripts=FBgn0023509.mrna1,comp147703_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147753478	147755130	.	-	.	ID=FBgn0023509.mrna1;geneID=FBgn0023509.path1;Name=FBgn0023509;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1641;mismatches=12;indels=0;unknowns=0;Target=FBgn0023509 1653 1 .;locus=RLOC_00012270
Chr1	stalkie_big_nohaplotig	exon	147753478	147755130	99	-	.	Parent=FBgn0023509.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147753478	147755130	.	-	0	Parent=FBgn0023509.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147753950	147757076	.	+	.	ID=comp147703_c0_seq1.mrna1;geneID=comp147703_c0_seq1.path1;Name=comp147703_c0_seq1;Dir=sensecoverage=100.0;identity=96.7;matches=869;mismatches=26;indels=4;unknowns=0;Target=comp147703_c0_seq1 45 104 +;locus=RLOC_00012270
Chr1	stalkie_big_nohaplotig	exon	147753950	147753973	100	+	.	Parent=comp147703_c0_seq1.mrna1;Target=comp147703_c0_seq1 1 24 +
Chr1	stalkie_big_nohaplotig	exon	147756206	147757076	96	+	.	Parent=comp147703_c0_seq1.mrna1;Target=comp147703_c0_seq1 25 899 +
Chr1	stalkie_big_nohaplotig	CDS	147756226	147756285	.	+	0	Parent=comp147703_c0_seq1.mrna1
Chr1	gffcl	locus	147761192	147874617	.	-	.	ID=RLOC_00012271;geneIDs=AGAP000443.1.path1;transcripts=AGAP000443.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147761192	147874617	.	-	.	ID=AGAP000443.1.mrna1;geneID=AGAP000443.1.path1;Name=AGAP000443.1;Dir=sensecoverage=100.0;identity=99.5;matches=6760;mismatches=29;indels=6;unknowns=0;locus=RLOC_00012271
Chr1	stalkie_big_nohaplotig	exon	147761192	147761462	98	-	.	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 6519 6789 +
Chr1	stalkie_big_nohaplotig	exon	147761524	147761624	95	-	.	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 6418 6518 +
Chr1	stalkie_big_nohaplotig	exon	147761680	147761750	98	-	.	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 6347 6417 +
Chr1	stalkie_big_nohaplotig	exon	147762046	147763292	99	-	.	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 5100 6346 +
Chr1	stalkie_big_nohaplotig	exon	147763707	147764098	100	-	.	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 4708 5099 +
Chr1	stalkie_big_nohaplotig	exon	147844812	147845663	100	-	.	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 3856 4707 +
Chr1	stalkie_big_nohaplotig	exon	147846216	147846574	100	-	.	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 3497 3855 +
Chr1	stalkie_big_nohaplotig	exon	147849581	147849823	100	-	.	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 3254 3496 +
Chr1	stalkie_big_nohaplotig	exon	147851508	147851722	100	-	.	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 3039 3253 +
Chr1	stalkie_big_nohaplotig	exon	147851847	147851965	99	-	.	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 2920 3038 +
Chr1	stalkie_big_nohaplotig	exon	147852078	147852153	100	-	.	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 2844 2919 +
Chr1	stalkie_big_nohaplotig	exon	147852431	147852569	100	-	.	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 2705 2843 +
Chr1	stalkie_big_nohaplotig	exon	147854928	147855222	100	-	.	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 2410 2704 +
Chr1	stalkie_big_nohaplotig	exon	147855499	147855704	100	-	.	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 2204 2409 +
Chr1	stalkie_big_nohaplotig	exon	147856214	147857515	99	-	.	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 908 2203 +
Chr1	stalkie_big_nohaplotig	exon	147858532	147858763	100	-	.	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 676 907 +
Chr1	stalkie_big_nohaplotig	exon	147859089	147859212	100	-	.	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 552 675 +
Chr1	stalkie_big_nohaplotig	exon	147860475	147860628	100	-	.	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 398 551 +
Chr1	stalkie_big_nohaplotig	exon	147867704	147867721	100	-	.	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 380 397 +
Chr1	stalkie_big_nohaplotig	exon	147874239	147874617	99	-	.	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 1 379 +
Chr1	stalkie_big_nohaplotig	CDS	147761192	147761462	.	-	1	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 6519 6789 +
Chr1	stalkie_big_nohaplotig	CDS	147761524	147761624	.	-	0	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 6418 6518 +
Chr1	stalkie_big_nohaplotig	CDS	147761680	147761750	.	-	2	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 6347 6417 +
Chr1	stalkie_big_nohaplotig	CDS	147762046	147763292	.	-	1	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 5100 6346 +
Chr1	stalkie_big_nohaplotig	CDS	147763707	147764098	.	-	0	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 4708 5099 +
Chr1	stalkie_big_nohaplotig	CDS	147844812	147845663	.	-	0	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 3856 4707 +
Chr1	stalkie_big_nohaplotig	CDS	147846216	147846574	.	-	2	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 3497 3855 +
Chr1	stalkie_big_nohaplotig	CDS	147849581	147849823	.	-	2	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 3254 3496 +
Chr1	stalkie_big_nohaplotig	CDS	147851508	147851722	.	-	1	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 3039 3253 +
Chr1	stalkie_big_nohaplotig	CDS	147851847	147851965	.	-	0	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 2920 3038 +
Chr1	stalkie_big_nohaplotig	CDS	147852078	147852153	.	-	1	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 2844 2919 +
Chr1	stalkie_big_nohaplotig	CDS	147852431	147852569	.	-	2	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 2705 2843 +
Chr1	stalkie_big_nohaplotig	CDS	147854928	147855222	.	-	0	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 2410 2704 +
Chr1	stalkie_big_nohaplotig	CDS	147855499	147855704	.	-	2	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 2204 2409 +
Chr1	stalkie_big_nohaplotig	CDS	147856214	147857515	.	-	2	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 908 2203 +
Chr1	stalkie_big_nohaplotig	CDS	147858532	147858763	.	-	0	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 676 907 +
Chr1	stalkie_big_nohaplotig	CDS	147859089	147859212	.	-	1	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 552 675 +
Chr1	stalkie_big_nohaplotig	CDS	147860475	147860628	.	-	2	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 398 551 +
Chr1	stalkie_big_nohaplotig	CDS	147867704	147867721	.	-	2	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 380 397 +
Chr1	stalkie_big_nohaplotig	CDS	147874239	147874617	.	-	0	Parent=AGAP000443.1.mrna1;Target=AGAP000443.1 1 379 +
Chr1	gffcl	locus	147782991	147783593	.	-	.	ID=RLOC_00012272;geneIDs=comp1035607_c0_seq1.path1;transcripts=comp1035607_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147782991	147783593	.	-	.	ID=comp1035607_c0_seq1.mrna1;geneID=comp1035607_c0_seq1.path1;Name=comp1035607_c0_seq1;Dir=indeterminatecoverage=99.8;identity=88.6;matches=553;mismatches=48;indels=23;unknowns=0;Target=comp1035607_c0_seq1 622 1 .;CDS_Target=comp1035607_c0_seq1 47 3 .;locus=RLOC_00012272
Chr1	stalkie_big_nohaplotig	exon	147782991	147783593	88	-	.	Parent=comp1035607_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147783547	147783591	.	-	0	Parent=comp1035607_c0_seq1.mrna1
Chr1	gffcl	locus	147874831	147893078	.	-	.	ID=RLOC_00012273;geneIDs=AAEL011402.1.path1;transcripts=AAEL011402.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147874831	147893078	.	-	.	ID=AAEL011402.1.mrna1;geneID=AAEL011402.1.path1;Name=AAEL011402.1;Dir=sensecoverage=100.0;identity=99.6;matches=3413;mismatches=7;indels=6;unknowns=0;locus=RLOC_00012273
Chr1	stalkie_big_nohaplotig	exon	147874831	147874966	99	-	.	Parent=AAEL011402.1.mrna1;Target=AAEL011402.1 3285 3420 +
Chr1	stalkie_big_nohaplotig	exon	147876187	147876385	100	-	.	Parent=AAEL011402.1.mrna1;Target=AAEL011402.1 3086 3284 +
Chr1	stalkie_big_nohaplotig	exon	147876478	147876690	100	-	.	Parent=AAEL011402.1.mrna1;Target=AAEL011402.1 2873 3085 +
Chr1	stalkie_big_nohaplotig	exon	147877413	147878771	100	-	.	Parent=AAEL011402.1.mrna1;Target=AAEL011402.1 1514 2872 +
Chr1	stalkie_big_nohaplotig	exon	147878994	147879148	100	-	.	Parent=AAEL011402.1.mrna1;Target=AAEL011402.1 1359 1513 +
Chr1	stalkie_big_nohaplotig	exon	147879725	147880391	99	-	.	Parent=AAEL011402.1.mrna1;Target=AAEL011402.1 692 1358 +
Chr1	stalkie_big_nohaplotig	exon	147892382	147893078	98	-	.	Parent=AAEL011402.1.mrna1;Target=AAEL011402.1 1 691 +
Chr1	stalkie_big_nohaplotig	CDS	147874831	147874966	.	-	1	Parent=AAEL011402.1.mrna1;Target=AAEL011402.1 3285 3420 +
Chr1	stalkie_big_nohaplotig	CDS	147876187	147876385	.	-	2	Parent=AAEL011402.1.mrna1;Target=AAEL011402.1 3086 3284 +
Chr1	stalkie_big_nohaplotig	CDS	147876478	147876690	.	-	2	Parent=AAEL011402.1.mrna1;Target=AAEL011402.1 2873 3085 +
Chr1	stalkie_big_nohaplotig	CDS	147877413	147878771	.	-	2	Parent=AAEL011402.1.mrna1;Target=AAEL011402.1 1514 2872 +
Chr1	stalkie_big_nohaplotig	CDS	147878994	147879148	.	-	1	Parent=AAEL011402.1.mrna1;Target=AAEL011402.1 1359 1513 +
Chr1	stalkie_big_nohaplotig	CDS	147879725	147880391	.	-	2	Parent=AAEL011402.1.mrna1;Target=AAEL011402.1 692 1358 +
Chr1	stalkie_big_nohaplotig	CDS	147892382	147893078	.	-	0	Parent=AAEL011402.1.mrna1;Target=AAEL011402.1 1 691 +
Chr1	gffcl	locus	147903570	147904454	.	-	.	ID=RLOC_00012275;geneIDs=Dv_FBgn0206941.2.path1;transcripts=Dv_FBgn0206941.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147903570	147904454	.	-	.	ID=Dv_FBgn0206941.2.mrna1;geneID=Dv_FBgn0206941.2.path1;Name=Dv_FBgn0206941.2;Dir=indeterminatecoverage=100.0;identity=99.9;matches=884;mismatches=1;indels=0;unknowns=0;Target=Dv_FBgn0206941.2 885 1 .;locus=RLOC_00012275
Chr1	stalkie_big_nohaplotig	exon	147903570	147904454	99	-	.	Parent=Dv_FBgn0206941.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147903570	147904454	.	-	0	Parent=Dv_FBgn0206941.2.mrna1
Chr1	gffcl	locus	147935463	147936601	.	-	.	ID=RLOC_00012277;geneIDs=comp161375_c0_seq1.path1;transcripts=comp161375_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147935463	147936601	.	-	.	ID=comp161375_c0_seq1.mrna1;geneID=comp161375_c0_seq1.path1;Name=comp161375_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=1119;mismatches=20;indels=11;unknowns=0;Target=comp161375_c0_seq1 1150 1 .;CDS_Target=comp161375_c0_seq1 546 382 .;locus=RLOC_00012277
Chr1	stalkie_big_nohaplotig	exon	147935463	147936601	97	-	.	Parent=comp161375_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147936066	147936230	.	-	0	Parent=comp161375_c0_seq1.mrna1
Chr1	gffcl	locus	147949975	147968837	.	+	.	ID=RLOC_00012278;geneIDs=FBgn0004227.1.path1,comp162615_c1_seq1.path1;transcripts=comp162615_c1_seq1.mrna1,FBgn0004227.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147949975	147968837	.	+	.	ID=comp162615_c1_seq1.mrna1;geneID=comp162615_c1_seq1.path1;Name=comp162615_c1_seq1;Dir=antisensecoverage=81.3;identity=98.1;matches=3610;mismatches=43;indels=27;unknowns=0;locus=RLOC_00012278
Chr1	stalkie_big_nohaplotig	exon	147949975	147950543	98	+	.	Parent=comp162615_c1_seq1.mrna1;Target=comp162615_c1_seq1 3827 4398 -
Chr1	stalkie_big_nohaplotig	exon	147952538	147953726	98	+	.	Parent=comp162615_c1_seq1.mrna1;Target=comp162615_c1_seq1 2626 3826 -
Chr1	stalkie_big_nohaplotig	exon	147953796	147954098	99	+	.	Parent=comp162615_c1_seq1.mrna1;Target=comp162615_c1_seq1 2323 2625 -
Chr1	stalkie_big_nohaplotig	exon	147954172	147954227	92	+	.	Parent=comp162615_c1_seq1.mrna1;Target=comp162615_c1_seq1 2267 2322 -
Chr1	stalkie_big_nohaplotig	exon	147964471	147964519	100	+	.	Parent=comp162615_c1_seq1.mrna1;Target=comp162615_c1_seq1 2218 2266 -
Chr1	stalkie_big_nohaplotig	exon	147964585	147964686	95	+	.	Parent=comp162615_c1_seq1.mrna1;Target=comp162615_c1_seq1 2116 2217 -
Chr1	stalkie_big_nohaplotig	exon	147964921	147964927	100	+	.	Parent=comp162615_c1_seq1.mrna1;Target=comp162615_c1_seq1 2109 2115 -
Chr1	stalkie_big_nohaplotig	exon	147964991	147965098	95	+	.	Parent=comp162615_c1_seq1.mrna1;Target=comp162615_c1_seq1 2001 2108 -
Chr1	stalkie_big_nohaplotig	exon	147965303	147965393	100	+	.	Parent=comp162615_c1_seq1.mrna1;Target=comp162615_c1_seq1 1910 2000 -
Chr1	stalkie_big_nohaplotig	exon	147965681	147965733	100	+	.	Parent=comp162615_c1_seq1.mrna1;Target=comp162615_c1_seq1 1857 1909 -
Chr1	stalkie_big_nohaplotig	exon	147966160	147966298	85	+	.	Parent=comp162615_c1_seq1.mrna1;Target=comp162615_c1_seq1 1708 1856 -
Chr1	stalkie_big_nohaplotig	exon	147966826	147966875	98	+	.	Parent=comp162615_c1_seq1.mrna1;Target=comp162615_c1_seq1 1658 1707 -
Chr1	stalkie_big_nohaplotig	exon	147967407	147967456	98	+	.	Parent=comp162615_c1_seq1.mrna1;Target=comp162615_c1_seq1 1608 1657 -
Chr1	stalkie_big_nohaplotig	exon	147967685	147968103	97	+	.	Parent=comp162615_c1_seq1.mrna1;Target=comp162615_c1_seq1 1191 1607 -
Chr1	stalkie_big_nohaplotig	exon	147968312	147968550	100	+	.	Parent=comp162615_c1_seq1.mrna1;Target=comp162615_c1_seq1 952 1190 -
Chr1	stalkie_big_nohaplotig	exon	147968607	147968837	100	+	.	Parent=comp162615_c1_seq1.mrna1;Target=comp162615_c1_seq1 721 951 -
Chr1	stalkie_big_nohaplotig	CDS	147950259	147950543	.	+	0	Parent=comp162615_c1_seq1.mrna1;Target=comp162615_c1_seq1 3827 4114 .
Chr1	stalkie_big_nohaplotig	CDS	147952538	147953726	.	+	0	Parent=comp162615_c1_seq1.mrna1;Target=comp162615_c1_seq1 2626 3826 .
Chr1	stalkie_big_nohaplotig	CDS	147953796	147954098	.	+	2	Parent=comp162615_c1_seq1.mrna1;Target=comp162615_c1_seq1 2323 2625 .
Chr1	stalkie_big_nohaplotig	CDS	147954172	147954227	.	+	2	Parent=comp162615_c1_seq1.mrna1;Target=comp162615_c1_seq1 2267 2322 .
Chr1	stalkie_big_nohaplotig	CDS	147964471	147964500	.	+	0	Parent=comp162615_c1_seq1.mrna1;Target=comp162615_c1_seq1 2237 2266 .
Chr1	stalkie_big_nohaplotig	mRNA	147950220	147957555	.	+	.	ID=FBgn0004227.1.mrna1;geneID=FBgn0004227.1.path1;Name=FBgn0004227.1;Dir=sensecoverage=100.0;identity=98.8;matches=1982;mismatches=10;indels=15;unknowns=0;locus=RLOC_00012278
Chr1	stalkie_big_nohaplotig	exon	147950220	147950543	97	+	.	Parent=FBgn0004227.1.mrna1;Target=FBgn0004227.1 1 327 +
Chr1	stalkie_big_nohaplotig	exon	147952538	147953726	98	+	.	Parent=FBgn0004227.1.mrna1;Target=FBgn0004227.1 328 1528 +
Chr1	stalkie_big_nohaplotig	exon	147953796	147954098	99	+	.	Parent=FBgn0004227.1.mrna1;Target=FBgn0004227.1 1529 1831 +
Chr1	stalkie_big_nohaplotig	exon	147954172	147954227	92	+	.	Parent=FBgn0004227.1.mrna1;Target=FBgn0004227.1 1832 1887 +
Chr1	stalkie_big_nohaplotig	exon	147957436	147957555	100	+	.	Parent=FBgn0004227.1.mrna1;Target=FBgn0004227.1 1888 2007 +
Chr1	stalkie_big_nohaplotig	CDS	147950220	147950543	.	+	0	Parent=FBgn0004227.1.mrna1;Target=FBgn0004227.1 1 327 +
Chr1	stalkie_big_nohaplotig	CDS	147952538	147953726	.	+	0	Parent=FBgn0004227.1.mrna1;Target=FBgn0004227.1 328 1528 +
Chr1	stalkie_big_nohaplotig	CDS	147953796	147954098	.	+	2	Parent=FBgn0004227.1.mrna1;Target=FBgn0004227.1 1529 1831 +
Chr1	stalkie_big_nohaplotig	CDS	147954172	147954227	.	+	2	Parent=FBgn0004227.1.mrna1;Target=FBgn0004227.1 1832 1887 +
Chr1	stalkie_big_nohaplotig	CDS	147957436	147957555	.	+	0	Parent=FBgn0004227.1.mrna1;Target=FBgn0004227.1 1888 2007 +
Chr1	gffcl	locus	147954369	147954844	.	-	.	ID=RLOC_00012279;geneIDs=comp151575_c0_seq1.path1;transcripts=comp151575_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147954369	147954844	.	-	.	ID=comp151575_c0_seq1.mrna1;geneID=comp151575_c0_seq1.path1;Name=comp151575_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=471;mismatches=5;indels=0;unknowns=0;Target=comp151575_c0_seq1 476 1 .;CDS_Target=comp151575_c0_seq1 96 1 .;locus=RLOC_00012279
Chr1	stalkie_big_nohaplotig	exon	147954369	147954844	98	-	.	Parent=comp151575_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147954749	147954844	.	-	0	Parent=comp151575_c0_seq1.mrna1
Chr1	gffcl	locus	147955805	147956350	.	-	.	ID=RLOC_00012280;geneIDs=comp161699_c0_seq1.path1;transcripts=comp161699_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147955805	147956350	.	-	.	ID=comp161699_c0_seq1.mrna1;geneID=comp161699_c0_seq1.path1;Name=comp161699_c0_seq1;Dir=indeterminatecoverage=89.9;identity=94.9;matches=519;mismatches=12;indels=16;unknowns=0;Target=comp161699_c0_seq1 533 2 .;CDS_Target=comp161699_c0_seq1 527 450 .;locus=RLOC_00012280
Chr1	stalkie_big_nohaplotig	exon	147955805	147956350	94	-	.	Parent=comp161699_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147955811	147955888	.	-	0	Parent=comp161699_c0_seq1.mrna1
Chr1	gffcl	locus	147956609	147957100	.	-	.	ID=RLOC_00012281;geneIDs=comp151910_c1_seq1.path1;transcripts=comp151910_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147956609	147957100	.	-	.	ID=comp151910_c1_seq1.mrna1;geneID=comp151910_c1_seq1.path1;Name=comp151910_c1_seq1;Dir=indeterminatecoverage=100.0;identity=92.5;matches=456;mismatches=6;indels=31;unknowns=0;Target=comp151910_c1_seq1 463 1 .;CDS_Target=comp151910_c1_seq1 197 42 .;locus=RLOC_00012281
Chr1	stalkie_big_nohaplotig	exon	147956609	147957100	92	-	.	Parent=comp151910_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147956892	147957059	.	-	0	Parent=comp151910_c1_seq1.mrna1
Chr1	gffcl	locus	147968465	147970413	.	-	.	ID=RLOC_00012282;geneIDs=FBgn0038342.1.path1;transcripts=FBgn0038342.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147968465	147970413	.	-	.	ID=FBgn0038342.1.mrna1;geneID=FBgn0038342.1.path1;Name=FBgn0038342.1;Dir=sensecoverage=100.0;identity=99.8;matches=602;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012282
Chr1	stalkie_big_nohaplotig	exon	147968465	147968550	100	-	.	Parent=FBgn0038342.1.mrna1;Target=FBgn0038342.1 518 603 +
Chr1	stalkie_big_nohaplotig	exon	147968607	147968837	100	-	.	Parent=FBgn0038342.1.mrna1;Target=FBgn0038342.1 287 517 +
Chr1	stalkie_big_nohaplotig	exon	147970128	147970413	99	-	.	Parent=FBgn0038342.1.mrna1;Target=FBgn0038342.1 1 286 +
Chr1	stalkie_big_nohaplotig	CDS	147968465	147968550	.	-	2	Parent=FBgn0038342.1.mrna1;Target=FBgn0038342.1 518 603 +
Chr1	stalkie_big_nohaplotig	CDS	147968607	147968837	.	-	2	Parent=FBgn0038342.1.mrna1;Target=FBgn0038342.1 287 517 +
Chr1	stalkie_big_nohaplotig	CDS	147970128	147970413	.	-	0	Parent=FBgn0038342.1.mrna1;Target=FBgn0038342.1 1 286 +
Chr1	gffcl	locus	147972796	147974277	.	+	.	ID=RLOC_00012283;geneIDs=comp151395_c0_seq1.path1;transcripts=comp151395_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	147972796	147974277	.	+	.	ID=comp151395_c0_seq1.mrna1;geneID=comp151395_c0_seq1.path1;Name=comp151395_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.3;matches=1475;mismatches=6;indels=4;unknowns=0;Target=comp151395_c0_seq1 1484 1 .;CDS_Target=comp151395_c0_seq1 196 2 .;locus=RLOC_00012283
Chr1	stalkie_big_nohaplotig	exon	147972796	147974277	99	+	.	Parent=comp151395_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	147972797	147972991	.	+	0	Parent=comp151395_c0_seq1.mrna1
Chr1	gffcl	locus	148003905	148040324	.	+	.	ID=RLOC_00012284;geneIDs=FBgn0043903.1.path1;transcripts=FBgn0043903.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148003905	148040324	.	+	.	ID=FBgn0043903.1.mrna1;geneID=FBgn0043903.1.path1;Name=FBgn0043903.1;Dir=sensecoverage=98.7;identity=99.4;matches=3668;mismatches=23;indels=0;unknowns=0;locus=RLOC_00012284
Chr1	stalkie_big_nohaplotig	exon	148003905	148003969	98	+	.	Parent=FBgn0043903.1.mrna1;Target=FBgn0043903.1 51 115 +
Chr1	stalkie_big_nohaplotig	exon	148010617	148010756	99	+	.	Parent=FBgn0043903.1.mrna1;Target=FBgn0043903.1 116 255 +
Chr1	stalkie_big_nohaplotig	exon	148024981	148025092	100	+	.	Parent=FBgn0043903.1.mrna1;Target=FBgn0043903.1 256 367 +
Chr1	stalkie_big_nohaplotig	exon	148031818	148032117	99	+	.	Parent=FBgn0043903.1.mrna1;Target=FBgn0043903.1 368 667 +
Chr1	stalkie_big_nohaplotig	exon	148033371	148033887	99	+	.	Parent=FBgn0043903.1.mrna1;Target=FBgn0043903.1 668 1184 +
Chr1	stalkie_big_nohaplotig	exon	148033948	148034221	99	+	.	Parent=FBgn0043903.1.mrna1;Target=FBgn0043903.1 1185 1458 +
Chr1	stalkie_big_nohaplotig	exon	148035384	148035834	99	+	.	Parent=FBgn0043903.1.mrna1;Target=FBgn0043903.1 1459 1909 +
Chr1	stalkie_big_nohaplotig	exon	148035913	148036033	100	+	.	Parent=FBgn0043903.1.mrna1;Target=FBgn0043903.1 1910 2030 +
Chr1	stalkie_big_nohaplotig	exon	148036101	148036306	100	+	.	Parent=FBgn0043903.1.mrna1;Target=FBgn0043903.1 2031 2236 +
Chr1	stalkie_big_nohaplotig	exon	148038756	148039933	99	+	.	Parent=FBgn0043903.1.mrna1;Target=FBgn0043903.1 2237 3414 +
Chr1	stalkie_big_nohaplotig	exon	148039998	148040324	99	+	.	Parent=FBgn0043903.1.mrna1;Target=FBgn0043903.1 3415 3741 +
Chr1	stalkie_big_nohaplotig	CDS	148003906	148003969	.	+	0	Parent=FBgn0043903.1.mrna1;Target=FBgn0043903.1 52 115 +
Chr1	stalkie_big_nohaplotig	CDS	148010617	148010756	.	+	2	Parent=FBgn0043903.1.mrna1;Target=FBgn0043903.1 116 255 +
Chr1	stalkie_big_nohaplotig	CDS	148024981	148025092	.	+	0	Parent=FBgn0043903.1.mrna1;Target=FBgn0043903.1 256 367 +
Chr1	stalkie_big_nohaplotig	CDS	148031818	148032117	.	+	2	Parent=FBgn0043903.1.mrna1;Target=FBgn0043903.1 368 667 +
Chr1	stalkie_big_nohaplotig	CDS	148033371	148033887	.	+	2	Parent=FBgn0043903.1.mrna1;Target=FBgn0043903.1 668 1184 +
Chr1	stalkie_big_nohaplotig	CDS	148033948	148034221	.	+	1	Parent=FBgn0043903.1.mrna1;Target=FBgn0043903.1 1185 1458 +
Chr1	stalkie_big_nohaplotig	CDS	148035384	148035834	.	+	0	Parent=FBgn0043903.1.mrna1;Target=FBgn0043903.1 1459 1909 +
Chr1	stalkie_big_nohaplotig	CDS	148035913	148036033	.	+	2	Parent=FBgn0043903.1.mrna1;Target=FBgn0043903.1 1910 2030 +
Chr1	stalkie_big_nohaplotig	CDS	148036101	148036306	.	+	1	Parent=FBgn0043903.1.mrna1;Target=FBgn0043903.1 2031 2236 +
Chr1	stalkie_big_nohaplotig	CDS	148038756	148039933	.	+	2	Parent=FBgn0043903.1.mrna1;Target=FBgn0043903.1 2237 3414 +
Chr1	stalkie_big_nohaplotig	CDS	148039998	148040324	.	+	0	Parent=FBgn0043903.1.mrna1;Target=FBgn0043903.1 3415 3741 +
Chr1	gffcl	locus	148005525	148006259	.	-	.	ID=RLOC_00012285;geneIDs=FBgn0004907.5.path1;transcripts=FBgn0004907.5.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148005525	148006259	.	-	.	ID=FBgn0004907.5.mrna1;geneID=FBgn0004907.5.path1;Name=FBgn0004907.5;Dir=indeterminatecoverage=100.0;identity=99.9;matches=734;mismatches=1;indels=0;unknowns=0;Target=FBgn0004907.5 735 1 .;locus=RLOC_00012285
Chr1	stalkie_big_nohaplotig	exon	148005525	148006259	99	-	.	Parent=FBgn0004907.5.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148005525	148006259	.	-	0	Parent=FBgn0004907.5.mrna1
Chr1	gffcl	locus	148041732	148042012	.	+	.	ID=RLOC_00012286;geneIDs=comp143739_c0_seq1.path1;transcripts=comp143739_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148041732	148042012	.	+	.	ID=comp143739_c0_seq1.mrna1;geneID=comp143739_c0_seq1.path1;Name=comp143739_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.3;matches=279;mismatches=2;indels=0;unknowns=0;Target=comp143739_c0_seq1 281 1 .;CDS_Target=comp143739_c0_seq1 248 171 .;locus=RLOC_00012286
Chr1	stalkie_big_nohaplotig	exon	148041732	148042012	99	+	.	Parent=comp143739_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148041902	148041979	.	+	0	Parent=comp143739_c0_seq1.mrna1
Chr1	gffcl	locus	148044520	148044814	.	+	.	ID=RLOC_00012287;geneIDs=comp88655_c0_seq1.path1;transcripts=comp88655_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148044520	148044814	.	+	.	ID=comp88655_c0_seq1.mrna1;geneID=comp88655_c0_seq1.path1;Name=comp88655_c0_seq1;Dir=indeterminatecoverage=95.5;identity=100.0;matches=295;mismatches=0;indels=0;unknowns=0;Target=comp88655_c0_seq1 297 3 .;CDS_Target=comp88655_c0_seq1 178 5 .;locus=RLOC_00012287
Chr1	stalkie_big_nohaplotig	exon	148044520	148044814	100	+	.	Parent=comp88655_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148044522	148044695	.	+	0	Parent=comp88655_c0_seq1.mrna1
Chr1	gffcl	locus	148045033	148045558	.	+	.	ID=RLOC_00012288;geneIDs=comp142657_c0_seq1.path1;transcripts=comp142657_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148045033	148045558	.	+	.	ID=comp142657_c0_seq1.mrna1;geneID=comp142657_c0_seq1.path1;Name=comp142657_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=526;mismatches=0;indels=0;unknowns=0;Target=comp142657_c0_seq1 526 1 .;CDS_Target=comp142657_c0_seq1 48 1 .;locus=RLOC_00012288
Chr1	stalkie_big_nohaplotig	exon	148045033	148045558	100	+	.	Parent=comp142657_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148045033	148045080	.	+	0	Parent=comp142657_c0_seq1.mrna1
Chr1	gffcl	locus	148045801	148046300	.	+	.	ID=RLOC_00012289;geneIDs=comp135124_c0_seq2.path1;transcripts=comp135124_c0_seq2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148045801	148046300	.	+	.	ID=comp135124_c0_seq2.mrna1;geneID=comp135124_c0_seq2.path1;Name=comp135124_c0_seq2;Dir=indeterminatecoverage=99.8;identity=99.8;matches=499;mismatches=1;indels=0;unknowns=0;Target=comp135124_c0_seq2 500 1 .;CDS_Target=comp135124_c0_seq2 267 169 .;locus=RLOC_00012289
Chr1	stalkie_big_nohaplotig	exon	148045801	148046300	99	+	.	Parent=comp135124_c0_seq2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148045969	148046067	.	+	0	Parent=comp135124_c0_seq2.mrna1
Chr1	gffcl	locus	148047449	148048058	.	-	.	ID=RLOC_00012290;geneIDs=comp158257_c0_seq1.path1;transcripts=comp158257_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148047449	148048058	.	-	.	ID=comp158257_c0_seq1.mrna1;geneID=comp158257_c0_seq1.path1;Name=comp158257_c0_seq1;Dir=indeterminatecoverage=97.0;identity=99.5;matches=610;mismatches=0;indels=3;unknowns=0;Target=comp158257_c0_seq1 614 2 .;CDS_Target=comp158257_c0_seq1 68 3 .;locus=RLOC_00012290
Chr1	stalkie_big_nohaplotig	exon	148047449	148048058	99	-	.	Parent=comp158257_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148047995	148048057	.	-	0	Parent=comp158257_c0_seq1.mrna1
Chr1	gffcl	locus	148048900	148049153	.	+	.	ID=RLOC_00012291;geneIDs=comp134689_c0_seq1.path1;transcripts=comp134689_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148048900	148049153	.	+	.	ID=comp134689_c0_seq1.mrna1;geneID=comp134689_c0_seq1.path1;Name=comp134689_c0_seq1;Dir=indeterminatecoverage=98.8;identity=97.6;matches=248;mismatches=6;indels=0;unknowns=0;Target=comp134689_c0_seq1 257 4 .;CDS_Target=comp134689_c0_seq1 255 181 .;locus=RLOC_00012291
Chr1	stalkie_big_nohaplotig	exon	148048900	148049153	97	+	.	Parent=comp134689_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148049077	148049151	.	+	0	Parent=comp134689_c0_seq1.mrna1
Chr1	gffcl	locus	148057958	148058577	.	-	.	ID=RLOC_00012292;geneIDs=comp117259_c0_seq1.path1;transcripts=comp117259_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148057958	148058577	.	-	.	ID=comp117259_c0_seq1.mrna1;geneID=comp117259_c0_seq1.path1;Name=comp117259_c0_seq1;Dir=indeterminatecoverage=96.7;identity=99.7;matches=618;mismatches=2;indels=0;unknowns=0;Target=comp117259_c0_seq1 641 22 .;CDS_Target=comp117259_c0_seq1 94 23 .;locus=RLOC_00012292
Chr1	stalkie_big_nohaplotig	exon	148057958	148058577	99	-	.	Parent=comp117259_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148058505	148058576	.	-	0	Parent=comp117259_c0_seq1.mrna1
Chr1	gffcl	locus	148060187	148062146	.	-	.	ID=RLOC_00012293;geneIDs=comp162194_c0_seq1.path1;transcripts=comp162194_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148060187	148062146	.	-	.	ID=comp162194_c0_seq1.mrna1;geneID=comp162194_c0_seq1.path1;Name=comp162194_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=1911;mismatches=43;indels=13;unknowns=0;Target=comp162194_c0_seq1 1961 1 .;CDS_Target=comp162194_c0_seq1 886 671 .;locus=RLOC_00012293
Chr1	stalkie_big_nohaplotig	exon	148060187	148062146	97	-	.	Parent=comp162194_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148061267	148061482	.	-	0	Parent=comp162194_c0_seq1.mrna1
Chr1	gffcl	locus	148067631	148067903	.	-	.	ID=RLOC_00012294;geneIDs=comp119206_c0_seq1.path1;transcripts=comp119206_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148067631	148067903	.	-	.	ID=comp119206_c0_seq1.mrna1;geneID=comp119206_c0_seq1.path1;Name=comp119206_c0_seq1;Dir=indeterminatecoverage=98.2;identity=100.0;matches=273;mismatches=0;indels=0;unknowns=0;Target=comp119206_c0_seq1 278 6 .;CDS_Target=comp119206_c0_seq1 45 7 .;locus=RLOC_00012294
Chr1	stalkie_big_nohaplotig	exon	148067631	148067903	100	-	.	Parent=comp119206_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148067864	148067902	.	-	0	Parent=comp119206_c0_seq1.mrna1
Chr1	gffcl	locus	148087929	148091859	.	+	.	ID=RLOC_00012295;geneIDs=FBgn0052707.1.path1;transcripts=FBgn0052707.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148087929	148091859	.	+	.	ID=FBgn0052707.1.mrna1;geneID=FBgn0052707.1.path1;Name=FBgn0052707.1;Dir=sensecoverage=100.0;identity=99.7;matches=2243;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012295
Chr1	stalkie_big_nohaplotig	exon	148087929	148088049	100	+	.	Parent=FBgn0052707.1.mrna1;Target=FBgn0052707.1 1 121 +
Chr1	stalkie_big_nohaplotig	exon	148088108	148088224	100	+	.	Parent=FBgn0052707.1.mrna1;Target=FBgn0052707.1 122 238 +
Chr1	stalkie_big_nohaplotig	exon	148088287	148088435	99	+	.	Parent=FBgn0052707.1.mrna1;Target=FBgn0052707.1 239 387 +
Chr1	stalkie_big_nohaplotig	exon	148088500	148088879	99	+	.	Parent=FBgn0052707.1.mrna1;Target=FBgn0052707.1 388 767 +
Chr1	stalkie_big_nohaplotig	exon	148089939	148090115	100	+	.	Parent=FBgn0052707.1.mrna1;Target=FBgn0052707.1 768 944 +
Chr1	stalkie_big_nohaplotig	exon	148090189	148090351	100	+	.	Parent=FBgn0052707.1.mrna1;Target=FBgn0052707.1 945 1107 +
Chr1	stalkie_big_nohaplotig	exon	148090414	148090666	99	+	.	Parent=FBgn0052707.1.mrna1;Target=FBgn0052707.1 1108 1360 +
Chr1	stalkie_big_nohaplotig	exon	148090912	148091663	99	+	.	Parent=FBgn0052707.1.mrna1;Target=FBgn0052707.1 1361 2112 +
Chr1	stalkie_big_nohaplotig	exon	148091722	148091859	100	+	.	Parent=FBgn0052707.1.mrna1;Target=FBgn0052707.1 2113 2250 +
Chr1	stalkie_big_nohaplotig	CDS	148087929	148088049	.	+	0	Parent=FBgn0052707.1.mrna1;Target=FBgn0052707.1 1 121 +
Chr1	stalkie_big_nohaplotig	CDS	148088108	148088224	.	+	2	Parent=FBgn0052707.1.mrna1;Target=FBgn0052707.1 122 238 +
Chr1	stalkie_big_nohaplotig	CDS	148088287	148088435	.	+	2	Parent=FBgn0052707.1.mrna1;Target=FBgn0052707.1 239 387 +
Chr1	stalkie_big_nohaplotig	CDS	148088500	148088879	.	+	0	Parent=FBgn0052707.1.mrna1;Target=FBgn0052707.1 388 767 +
Chr1	stalkie_big_nohaplotig	CDS	148089939	148090115	.	+	1	Parent=FBgn0052707.1.mrna1;Target=FBgn0052707.1 768 944 +
Chr1	stalkie_big_nohaplotig	CDS	148090189	148090351	.	+	1	Parent=FBgn0052707.1.mrna1;Target=FBgn0052707.1 945 1107 +
Chr1	stalkie_big_nohaplotig	CDS	148090414	148090666	.	+	0	Parent=FBgn0052707.1.mrna1;Target=FBgn0052707.1 1108 1360 +
Chr1	stalkie_big_nohaplotig	CDS	148090912	148091663	.	+	2	Parent=FBgn0052707.1.mrna1;Target=FBgn0052707.1 1361 2112 +
Chr1	stalkie_big_nohaplotig	CDS	148091722	148091859	.	+	0	Parent=FBgn0052707.1.mrna1;Target=FBgn0052707.1 2113 2250 +
Chr1	gffcl	locus	148092522	148093986	.	-	.	ID=RLOC_00012296;geneIDs=FBgn0030990.1.path1;transcripts=FBgn0030990.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148092522	148093986	.	-	.	ID=FBgn0030990.1.mrna1;geneID=FBgn0030990.1.path1;Name=FBgn0030990.1;Dir=sensecoverage=100.0;identity=99.4;matches=1154;mismatches=6;indels=1;unknowns=0;locus=RLOC_00012296
Chr1	stalkie_big_nohaplotig	exon	148092522	148092772	99	-	.	Parent=FBgn0030990.1.mrna1;Target=FBgn0030990.1 910 1161 +
Chr1	stalkie_big_nohaplotig	exon	148092830	148093037	99	-	.	Parent=FBgn0030990.1.mrna1;Target=FBgn0030990.1 702 909 +
Chr1	stalkie_big_nohaplotig	exon	148093102	148093214	99	-	.	Parent=FBgn0030990.1.mrna1;Target=FBgn0030990.1 589 701 +
Chr1	stalkie_big_nohaplotig	exon	148093275	148093373	97	-	.	Parent=FBgn0030990.1.mrna1;Target=FBgn0030990.1 490 588 +
Chr1	stalkie_big_nohaplotig	exon	148093437	148093757	99	-	.	Parent=FBgn0030990.1.mrna1;Target=FBgn0030990.1 169 489 +
Chr1	stalkie_big_nohaplotig	exon	148093819	148093986	100	-	.	Parent=FBgn0030990.1.mrna1;Target=FBgn0030990.1 1 168 +
Chr1	stalkie_big_nohaplotig	CDS	148092522	148092772	.	-	0	Parent=FBgn0030990.1.mrna1;Target=FBgn0030990.1 910 1161 +
Chr1	stalkie_big_nohaplotig	CDS	148092830	148093037	.	-	1	Parent=FBgn0030990.1.mrna1;Target=FBgn0030990.1 702 909 +
Chr1	stalkie_big_nohaplotig	CDS	148093102	148093214	.	-	0	Parent=FBgn0030990.1.mrna1;Target=FBgn0030990.1 589 701 +
Chr1	stalkie_big_nohaplotig	CDS	148093275	148093373	.	-	0	Parent=FBgn0030990.1.mrna1;Target=FBgn0030990.1 490 588 +
Chr1	stalkie_big_nohaplotig	CDS	148093437	148093757	.	-	0	Parent=FBgn0030990.1.mrna1;Target=FBgn0030990.1 169 489 +
Chr1	stalkie_big_nohaplotig	CDS	148093819	148093986	.	-	0	Parent=FBgn0030990.1.mrna1;Target=FBgn0030990.1 1 168 +
Chr1	gffcl	locus	148097075	148103064	.	+	.	ID=RLOC_00012297;geneIDs=FBgn0030508.1.path1;transcripts=FBgn0030508.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148097075	148103064	.	+	.	ID=FBgn0030508.1.mrna1;geneID=FBgn0030508.1.path1;Name=FBgn0030508.1;Dir=sensecoverage=100.0;identity=99.3;matches=2284;mismatches=11;indels=6;unknowns=0;locus=RLOC_00012297
Chr1	stalkie_big_nohaplotig	exon	148097075	148097236	98	+	.	Parent=FBgn0030508.1.mrna1;Target=FBgn0030508.1 1 162 +
Chr1	stalkie_big_nohaplotig	exon	148100207	148100364	100	+	.	Parent=FBgn0030508.1.mrna1;Target=FBgn0030508.1 163 320 +
Chr1	stalkie_big_nohaplotig	exon	148101031	148101223	99	+	.	Parent=FBgn0030508.1.mrna1;Target=FBgn0030508.1 321 513 +
Chr1	stalkie_big_nohaplotig	exon	148101283	148103064	99	+	.	Parent=FBgn0030508.1.mrna1;Target=FBgn0030508.1 514 2301 +
Chr1	stalkie_big_nohaplotig	CDS	148097075	148097236	.	+	0	Parent=FBgn0030508.1.mrna1;Target=FBgn0030508.1 1 162 +
Chr1	stalkie_big_nohaplotig	CDS	148100207	148100364	.	+	0	Parent=FBgn0030508.1.mrna1;Target=FBgn0030508.1 163 320 +
Chr1	stalkie_big_nohaplotig	CDS	148101031	148101223	.	+	1	Parent=FBgn0030508.1.mrna1;Target=FBgn0030508.1 321 513 +
Chr1	stalkie_big_nohaplotig	CDS	148101283	148103064	.	+	0	Parent=FBgn0030508.1.mrna1;Target=FBgn0030508.1 514 2301 +
Chr1	gffcl	locus	148106209	148106865	.	+	.	ID=RLOC_00012298;geneIDs=comp154276_c0_seq1.path1;transcripts=comp154276_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148106209	148106865	.	+	.	ID=comp154276_c0_seq1.mrna1;geneID=comp154276_c0_seq1.path1;Name=comp154276_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.0;matches=646;mismatches=11;indels=16;unknowns=0;Target=comp154276_c0_seq1 673 1 .;CDS_Target=comp154276_c0_seq1 673 602 .;locus=RLOC_00012298
Chr1	stalkie_big_nohaplotig	exon	148106209	148106865	95	+	.	Parent=comp154276_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148106794	148106865	.	+	0	Parent=comp154276_c0_seq1.mrna1
Chr1	gffcl	locus	148112594	148116147	.	+	.	ID=RLOC_00012299;geneIDs=FBgn0030662.1.path1;transcripts=FBgn0030662.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148112594	148116147	.	+	.	ID=FBgn0030662.1.mrna1;geneID=FBgn0030662.1.path1;Name=FBgn0030662.1;Dir=sensecoverage=100.0;identity=99.0;matches=2479;mismatches=26;indels=0;unknowns=0;locus=RLOC_00012299
Chr1	stalkie_big_nohaplotig	exon	148112594	148113149	98	+	.	Parent=FBgn0030662.1.mrna1;Target=FBgn0030662.1 1 556 +
Chr1	stalkie_big_nohaplotig	exon	148113209	148113322	100	+	.	Parent=FBgn0030662.1.mrna1;Target=FBgn0030662.1 557 670 +
Chr1	stalkie_big_nohaplotig	exon	148113380	148113492	99	+	.	Parent=FBgn0030662.1.mrna1;Target=FBgn0030662.1 671 783 +
Chr1	stalkie_big_nohaplotig	exon	148113566	148113706	98	+	.	Parent=FBgn0030662.1.mrna1;Target=FBgn0030662.1 784 924 +
Chr1	stalkie_big_nohaplotig	exon	148113854	148114025	98	+	.	Parent=FBgn0030662.1.mrna1;Target=FBgn0030662.1 925 1096 +
Chr1	stalkie_big_nohaplotig	exon	148114614	148115027	98	+	.	Parent=FBgn0030662.1.mrna1;Target=FBgn0030662.1 1097 1510 +
Chr1	stalkie_big_nohaplotig	exon	148115092	148115738	98	+	.	Parent=FBgn0030662.1.mrna1;Target=FBgn0030662.1 1511 2157 +
Chr1	stalkie_big_nohaplotig	exon	148115800	148116147	100	+	.	Parent=FBgn0030662.1.mrna1;Target=FBgn0030662.1 2158 2505 +
Chr1	stalkie_big_nohaplotig	CDS	148112594	148113149	.	+	0	Parent=FBgn0030662.1.mrna1;Target=FBgn0030662.1 1 556 +
Chr1	stalkie_big_nohaplotig	CDS	148113209	148113322	.	+	2	Parent=FBgn0030662.1.mrna1;Target=FBgn0030662.1 557 670 +
Chr1	stalkie_big_nohaplotig	CDS	148113380	148113492	.	+	2	Parent=FBgn0030662.1.mrna1;Target=FBgn0030662.1 671 783 +
Chr1	stalkie_big_nohaplotig	CDS	148113566	148113706	.	+	0	Parent=FBgn0030662.1.mrna1;Target=FBgn0030662.1 784 924 +
Chr1	stalkie_big_nohaplotig	CDS	148113854	148114025	.	+	0	Parent=FBgn0030662.1.mrna1;Target=FBgn0030662.1 925 1096 +
Chr1	stalkie_big_nohaplotig	CDS	148114614	148115027	.	+	2	Parent=FBgn0030662.1.mrna1;Target=FBgn0030662.1 1097 1510 +
Chr1	stalkie_big_nohaplotig	CDS	148115092	148115738	.	+	2	Parent=FBgn0030662.1.mrna1;Target=FBgn0030662.1 1511 2157 +
Chr1	stalkie_big_nohaplotig	CDS	148115800	148116147	.	+	0	Parent=FBgn0030662.1.mrna1;Target=FBgn0030662.1 2158 2505 +
Chr1	gffcl	locus	148116600	148118163	.	-	.	ID=RLOC_00012300;geneIDs=FBgn0030660.1.path1;transcripts=FBgn0030660.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148116600	148118163	.	-	.	ID=FBgn0030660.1.mrna1;geneID=FBgn0030660.1.path1;Name=FBgn0030660.1;Dir=sensecoverage=100.0;identity=99.5;matches=1322;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012300
Chr1	stalkie_big_nohaplotig	exon	148116600	148116716	100	-	.	Parent=FBgn0030660.1.mrna1;Target=FBgn0030660.1 1213 1329 +
Chr1	stalkie_big_nohaplotig	exon	148116770	148116937	99	-	.	Parent=FBgn0030660.1.mrna1;Target=FBgn0030660.1 1045 1212 +
Chr1	stalkie_big_nohaplotig	exon	148116997	148117130	100	-	.	Parent=FBgn0030660.1.mrna1;Target=FBgn0030660.1 911 1044 +
Chr1	stalkie_big_nohaplotig	exon	148117189	148117367	100	-	.	Parent=FBgn0030660.1.mrna1;Target=FBgn0030660.1 732 910 +
Chr1	stalkie_big_nohaplotig	exon	148117433	148118163	99	-	.	Parent=FBgn0030660.1.mrna1;Target=FBgn0030660.1 1 731 +
Chr1	stalkie_big_nohaplotig	CDS	148116600	148116716	.	-	0	Parent=FBgn0030660.1.mrna1;Target=FBgn0030660.1 1213 1329 +
Chr1	stalkie_big_nohaplotig	CDS	148116770	148116937	.	-	0	Parent=FBgn0030660.1.mrna1;Target=FBgn0030660.1 1045 1212 +
Chr1	stalkie_big_nohaplotig	CDS	148116997	148117130	.	-	2	Parent=FBgn0030660.1.mrna1;Target=FBgn0030660.1 911 1044 +
Chr1	stalkie_big_nohaplotig	CDS	148117189	148117367	.	-	1	Parent=FBgn0030660.1.mrna1;Target=FBgn0030660.1 732 910 +
Chr1	stalkie_big_nohaplotig	CDS	148117433	148118163	.	-	0	Parent=FBgn0030660.1.mrna1;Target=FBgn0030660.1 1 731 +
Chr1	gffcl	locus	148120328	148121908	.	+	.	ID=RLOC_00012301;geneIDs=FBgn0030659.1.path1;transcripts=FBgn0030659.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148120328	148121908	.	+	.	ID=FBgn0030659.1.mrna1;geneID=FBgn0030659.1.path1;Name=FBgn0030659.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1576;mismatches=5;indels=0;unknowns=0;Target=FBgn0030659.1 1581 1 .;locus=RLOC_00012301
Chr1	stalkie_big_nohaplotig	exon	148120328	148121908	99	+	.	Parent=FBgn0030659.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148120328	148121908	.	+	0	Parent=FBgn0030659.1.mrna1
Chr1	gffcl	locus	148124931	148125974	.	-	.	ID=RLOC_00012302;geneIDs=FBgn0030658.1.path1;transcripts=FBgn0030658.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148124931	148125974	.	-	.	ID=FBgn0030658.1.mrna1;geneID=FBgn0030658.1.path1;Name=FBgn0030658.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1041;mismatches=3;indels=0;unknowns=0;Target=FBgn0030658.1 1044 1 .;locus=RLOC_00012302
Chr1	stalkie_big_nohaplotig	exon	148124931	148125974	99	-	.	Parent=FBgn0030658.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148124931	148125974	.	-	0	Parent=FBgn0030658.1.mrna1
Chr1	gffcl	locus	148127539	148129214	.	+	.	ID=RLOC_00012303;geneIDs=FBgn0030061.1.path1;transcripts=FBgn0030061.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148127539	148129214	.	+	.	ID=FBgn0030061.1.mrna1;geneID=FBgn0030061.1.path1;Name=FBgn0030061.1;Dir=sensecoverage=100.0;identity=99.1;matches=1379;mismatches=13;indels=0;unknowns=0;locus=RLOC_00012303
Chr1	stalkie_big_nohaplotig	exon	148127539	148127663	95	+	.	Parent=FBgn0030061.1.mrna1;Target=FBgn0030061.1 1 125 +
Chr1	stalkie_big_nohaplotig	exon	148127741	148127914	100	+	.	Parent=FBgn0030061.1.mrna1;Target=FBgn0030061.1 126 299 +
Chr1	stalkie_big_nohaplotig	exon	148127979	148128296	99	+	.	Parent=FBgn0030061.1.mrna1;Target=FBgn0030061.1 300 617 +
Chr1	stalkie_big_nohaplotig	exon	148128367	148128762	99	+	.	Parent=FBgn0030061.1.mrna1;Target=FBgn0030061.1 618 1013 +
Chr1	stalkie_big_nohaplotig	exon	148128836	148129214	99	+	.	Parent=FBgn0030061.1.mrna1;Target=FBgn0030061.1 1014 1392 +
Chr1	stalkie_big_nohaplotig	CDS	148127539	148127663	.	+	0	Parent=FBgn0030061.1.mrna1;Target=FBgn0030061.1 1 125 +
Chr1	stalkie_big_nohaplotig	CDS	148127741	148127914	.	+	1	Parent=FBgn0030061.1.mrna1;Target=FBgn0030061.1 126 299 +
Chr1	stalkie_big_nohaplotig	CDS	148127979	148128296	.	+	1	Parent=FBgn0030061.1.mrna1;Target=FBgn0030061.1 300 617 +
Chr1	stalkie_big_nohaplotig	CDS	148128367	148128762	.	+	1	Parent=FBgn0030061.1.mrna1;Target=FBgn0030061.1 618 1013 +
Chr1	stalkie_big_nohaplotig	CDS	148128836	148129214	.	+	1	Parent=FBgn0030061.1.mrna1;Target=FBgn0030061.1 1014 1392 +
Chr1	gffcl	locus	148129960	148130781	.	-	.	ID=RLOC_00012304;geneIDs=FBgn0264389.1.path1;transcripts=FBgn0264389.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148129960	148130781	.	-	.	ID=FBgn0264389.1.mrna1;geneID=FBgn0264389.1.path1;Name=FBgn0264389.1;Dir=sensecoverage=100.0;identity=99.7;matches=700;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012304
Chr1	stalkie_big_nohaplotig	exon	148129960	148130061	100	-	.	Parent=FBgn0264389.1.mrna1;Target=FBgn0264389.1 601 702 +
Chr1	stalkie_big_nohaplotig	exon	148130130	148130603	99	-	.	Parent=FBgn0264389.1.mrna1;Target=FBgn0264389.1 127 600 +
Chr1	stalkie_big_nohaplotig	exon	148130656	148130781	100	-	.	Parent=FBgn0264389.1.mrna1;Target=FBgn0264389.1 1 126 +
Chr1	stalkie_big_nohaplotig	CDS	148129960	148130061	.	-	0	Parent=FBgn0264389.1.mrna1;Target=FBgn0264389.1 601 702 +
Chr1	stalkie_big_nohaplotig	CDS	148130130	148130603	.	-	0	Parent=FBgn0264389.1.mrna1;Target=FBgn0264389.1 127 600 +
Chr1	stalkie_big_nohaplotig	CDS	148130656	148130781	.	-	0	Parent=FBgn0264389.1.mrna1;Target=FBgn0264389.1 1 126 +
Chr1	gffcl	locus	148132444	148138834	.	+	.	ID=RLOC_00012305;geneIDs=FBgn0030946.1.path1;transcripts=FBgn0030946.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148132444	148138834	.	+	.	ID=FBgn0030946.1.mrna1;geneID=FBgn0030946.1.path1;Name=FBgn0030946.1;Dir=sensecoverage=100.0;identity=99.8;matches=2608;mismatches=5;indels=0;unknowns=0;locus=RLOC_00012305
Chr1	stalkie_big_nohaplotig	exon	148132444	148132534	100	+	.	Parent=FBgn0030946.1.mrna1;Target=FBgn0030946.1 1 91 +
Chr1	stalkie_big_nohaplotig	exon	148132626	148132887	100	+	.	Parent=FBgn0030946.1.mrna1;Target=FBgn0030946.1 92 353 +
Chr1	stalkie_big_nohaplotig	exon	148132947	148133132	100	+	.	Parent=FBgn0030946.1.mrna1;Target=FBgn0030946.1 354 539 +
Chr1	stalkie_big_nohaplotig	exon	148133217	148133409	100	+	.	Parent=FBgn0030946.1.mrna1;Target=FBgn0030946.1 540 732 +
Chr1	stalkie_big_nohaplotig	exon	148135044	148136402	99	+	.	Parent=FBgn0030946.1.mrna1;Target=FBgn0030946.1 733 2091 +
Chr1	stalkie_big_nohaplotig	exon	148136488	148136596	100	+	.	Parent=FBgn0030946.1.mrna1;Target=FBgn0030946.1 2092 2200 +
Chr1	stalkie_big_nohaplotig	exon	148136655	148136739	100	+	.	Parent=FBgn0030946.1.mrna1;Target=FBgn0030946.1 2201 2285 +
Chr1	stalkie_big_nohaplotig	exon	148136818	148136943	100	+	.	Parent=FBgn0030946.1.mrna1;Target=FBgn0030946.1 2286 2411 +
Chr1	stalkie_big_nohaplotig	exon	148138633	148138834	100	+	.	Parent=FBgn0030946.1.mrna1;Target=FBgn0030946.1 2412 2613 +
Chr1	stalkie_big_nohaplotig	CDS	148132444	148132534	.	+	0	Parent=FBgn0030946.1.mrna1;Target=FBgn0030946.1 1 91 +
Chr1	stalkie_big_nohaplotig	CDS	148132626	148132887	.	+	2	Parent=FBgn0030946.1.mrna1;Target=FBgn0030946.1 92 353 +
Chr1	stalkie_big_nohaplotig	CDS	148132947	148133132	.	+	1	Parent=FBgn0030946.1.mrna1;Target=FBgn0030946.1 354 539 +
Chr1	stalkie_big_nohaplotig	CDS	148133217	148133409	.	+	1	Parent=FBgn0030946.1.mrna1;Target=FBgn0030946.1 540 732 +
Chr1	stalkie_big_nohaplotig	CDS	148135044	148136402	.	+	0	Parent=FBgn0030946.1.mrna1;Target=FBgn0030946.1 733 2091 +
Chr1	stalkie_big_nohaplotig	CDS	148136488	148136596	.	+	0	Parent=FBgn0030946.1.mrna1;Target=FBgn0030946.1 2092 2200 +
Chr1	stalkie_big_nohaplotig	CDS	148136655	148136739	.	+	2	Parent=FBgn0030946.1.mrna1;Target=FBgn0030946.1 2201 2285 +
Chr1	stalkie_big_nohaplotig	CDS	148136818	148136943	.	+	1	Parent=FBgn0030946.1.mrna1;Target=FBgn0030946.1 2286 2411 +
Chr1	stalkie_big_nohaplotig	CDS	148138633	148138834	.	+	1	Parent=FBgn0030946.1.mrna1;Target=FBgn0030946.1 2412 2613 +
Chr1	gffcl	locus	148141945	148142650	.	+	.	ID=RLOC_00012306;geneIDs=comp158848_c0_seq1.path1;transcripts=comp158848_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148141945	148142650	.	+	.	ID=comp158848_c0_seq1.mrna1;geneID=comp158848_c0_seq1.path1;Name=comp158848_c0_seq1;Dir=indeterminatecoverage=99.4;identity=98.3;matches=694;mismatches=12;indels=0;unknowns=0;Target=comp158848_c0_seq1 706 1 .;CDS_Target=comp158848_c0_seq1 292 191 .;locus=RLOC_00012306
Chr1	stalkie_big_nohaplotig	exon	148141945	148142650	98	+	.	Parent=comp158848_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148142135	148142236	.	+	0	Parent=comp158848_c0_seq1.mrna1
Chr1	gffcl	locus	148143977	148144481	.	+	.	ID=RLOC_00012307;geneIDs=comp156977_c0_seq1.path1;transcripts=comp156977_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148143977	148144481	.	+	.	ID=comp156977_c0_seq1.mrna1;geneID=comp156977_c0_seq1.path1;Name=comp156977_c0_seq1;Dir=indeterminatecoverage=96.4;identity=97.6;matches=493;mismatches=11;indels=1;unknowns=0;Target=comp156977_c0_seq1 505 2 .;CDS_Target=comp156977_c0_seq1 116 3 .;locus=RLOC_00012307
Chr1	stalkie_big_nohaplotig	exon	148143977	148144481	97	+	.	Parent=comp156977_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148143978	148144091	.	+	0	Parent=comp156977_c0_seq1.mrna1
Chr1	gffcl	locus	148144816	148146152	.	-	.	ID=RLOC_00012308;geneIDs=comp150192_c3_seq1.path1;transcripts=comp150192_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148144816	148146152	.	-	.	ID=comp150192_c3_seq1.mrna1;geneID=comp150192_c3_seq1.path1;Name=comp150192_c3_seq1;Dir=sensecoverage=92.5;identity=99.7;matches=615;mismatches=1;indels=1;unknowns=0;Target=comp150192_c3_seq1 349 495 +;locus=RLOC_00012308
Chr1	stalkie_big_nohaplotig	exon	148144816	148145207	99	-	.	Parent=comp150192_c3_seq1.mrna1;Target=comp150192_c3_seq1 226 616 +
Chr1	stalkie_big_nohaplotig	exon	148145928	148146152	99	-	.	Parent=comp150192_c3_seq1.mrna1;Target=comp150192_c3_seq1 1 225 +
Chr1	stalkie_big_nohaplotig	CDS	148144938	148145084	.	-	0	Parent=comp150192_c3_seq1.mrna1
Chr1	gffcl	locus	148147663	148148920	.	-	.	ID=RLOC_00012309;geneIDs=comp151303_c0_seq1.path1,comp155243_c0_seq1.path1,comp910991_c0_seq1.path1;transcripts=comp155243_c0_seq1.mrna1,comp151303_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148147663	148148099	.	-	.	ID=comp155243_c0_seq1.mrna1;geneID=comp155243_c0_seq1.path1;Name=comp155243_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=437;mismatches=0;indels=0;unknowns=0;Target=comp155243_c0_seq1 437 1 .;CDS_Target=comp155243_c0_seq1 326 276 .;locus=RLOC_00012309
Chr1	stalkie_big_nohaplotig	exon	148147663	148148099	100	-	.	Parent=comp155243_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148147774	148147824	.	-	0	Parent=comp155243_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148148232	148148920	.	-	.	ID=comp151303_c0_seq1.mrna1;geneID=comp151303_c0_seq1.path1;Name=comp151303_c0_seq1;Dir=indeterminatecoverage=100.0;identity=89.2;matches=647;mismatches=17;indels=61;unknowns=0;Target=comp151303_c0_seq1 700 1 .;CDS_Target=comp151303_c0_seq1 185 3 .;locus=RLOC_00012309
Chr1	stalkie_big_nohaplotig	exon	148148232	148148920	89	-	.	Parent=comp151303_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148148758	148148918	.	-	0	Parent=comp151303_c0_seq1.mrna1
Chr1	gffcl	locus	148149380	148160384	.	-	.	ID=RLOC_00012310;geneIDs=FBgn0030174.1.path1;transcripts=FBgn0030174.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148149380	148160384	.	-	.	ID=FBgn0030174.1.mrna1;geneID=FBgn0030174.1.path1;Name=FBgn0030174.1;Dir=sensecoverage=95.3;identity=99.9;matches=1300;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012310
Chr1	stalkie_big_nohaplotig	exon	148149380	148149633	100	-	.	Parent=FBgn0030174.1.mrna1;Target=FBgn0030174.1 1112 1365 +
Chr1	stalkie_big_nohaplotig	exon	148152055	148152184	100	-	.	Parent=FBgn0030174.1.mrna1;Target=FBgn0030174.1 982 1111 +
Chr1	stalkie_big_nohaplotig	exon	148158887	148159666	99	-	.	Parent=FBgn0030174.1.mrna1;Target=FBgn0030174.1 202 981 +
Chr1	stalkie_big_nohaplotig	exon	148160248	148160384	100	-	.	Parent=FBgn0030174.1.mrna1;Target=FBgn0030174.1 65 201 +
Chr1	stalkie_big_nohaplotig	CDS	148149380	148149633	.	-	2	Parent=FBgn0030174.1.mrna1;Target=FBgn0030174.1 1112 1365 +
Chr1	stalkie_big_nohaplotig	CDS	148152055	148152184	.	-	0	Parent=FBgn0030174.1.mrna1;Target=FBgn0030174.1 982 1111 +
Chr1	stalkie_big_nohaplotig	CDS	148158887	148159666	.	-	0	Parent=FBgn0030174.1.mrna1;Target=FBgn0030174.1 202 981 +
Chr1	stalkie_big_nohaplotig	CDS	148160248	148160382	.	-	0	Parent=FBgn0030174.1.mrna1;Target=FBgn0030174.1 67 201 +
Chr1	gffcl	locus	148207901	148208289	.	+	.	ID=RLOC_00012311;geneIDs=comp149687_c0_seq1.path1;transcripts=comp149687_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148207901	148208289	.	+	.	ID=comp149687_c0_seq1.mrna1;geneID=comp149687_c0_seq1.path1;Name=comp149687_c0_seq1;Dir=indeterminatecoverage=99.0;identity=98.5;matches=383;mismatches=5;indels=1;unknowns=0;Target=comp149687_c0_seq1 392 5 .;CDS_Target=comp149687_c0_seq1 216 106 .;locus=RLOC_00012311
Chr1	stalkie_big_nohaplotig	exon	148207901	148208289	98	+	.	Parent=comp149687_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148208003	148208113	.	+	0	Parent=comp149687_c0_seq1.mrna1
Chr1	gffcl	locus	148208569	148208825	.	+	.	ID=RLOC_00012312;geneIDs=comp154265_c1_seq1.path1;transcripts=comp154265_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148208569	148208825	.	+	.	ID=comp154265_c1_seq1.mrna1;geneID=comp154265_c1_seq1.path1;Name=comp154265_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=257;mismatches=0;indels=0;unknowns=0;Target=comp154265_c1_seq1 257 1 .;CDS_Target=comp154265_c1_seq1 103 2 .;locus=RLOC_00012312
Chr1	stalkie_big_nohaplotig	exon	148208569	148208825	100	+	.	Parent=comp154265_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148208570	148208671	.	+	0	Parent=comp154265_c1_seq1.mrna1
Chr1	gffcl	locus	148208858	148209244	.	+	.	ID=RLOC_00012313;geneIDs=comp146780_c0_seq1.path1;transcripts=comp146780_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148208858	148209244	.	+	.	ID=comp146780_c0_seq1.mrna1;geneID=comp146780_c0_seq1.path1;Name=comp146780_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=383;mismatches=4;indels=0;unknowns=0;Target=comp146780_c0_seq1 387 1 .;CDS_Target=comp146780_c0_seq1 167 3 .;locus=RLOC_00012313
Chr1	stalkie_big_nohaplotig	exon	148208858	148209244	98	+	.	Parent=comp146780_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148208860	148209024	.	+	0	Parent=comp146780_c0_seq1.mrna1
Chr1	gffcl	locus	148214609	148343581	.	-	.	ID=RLOC_00012314;geneIDs=FBgn0029820.1.path1,comp161004_c0_seq1.path1;transcripts=comp161004_c0_seq1.mrna1,FBgn0029820.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148214609	148343581	.	-	.	ID=comp161004_c0_seq1.mrna1;geneID=comp161004_c0_seq1.path1;Name=comp161004_c0_seq1;Dir=indeterminatecoverage=63.2;identity=95.0;matches=828;mismatches=21;indels=23;unknowns=0;Target=comp161004_c0_seq1 991 875 .;locus=RLOC_00012314
Chr1	stalkie_big_nohaplotig	exon	148214609	148215323	98	-	.	Parent=comp161004_c0_seq1.mrna1;Target=comp161004_c0_seq1 1355 641 .
Chr1	stalkie_big_nohaplotig	exon	148224379	148224392	85	-	.	Parent=comp161004_c0_seq1.mrna1;Target=comp161004_c0_seq1 640 628 .
Chr1	stalkie_big_nohaplotig	exon	148226574	148226588	80	-	.	Parent=comp161004_c0_seq1.mrna1;Target=comp161004_c0_seq1 627 613 .
Chr1	stalkie_big_nohaplotig	exon	148231340	148231342	100	-	.	Parent=comp161004_c0_seq1.mrna1;Target=comp161004_c0_seq1 612 610 .
Chr1	stalkie_big_nohaplotig	exon	148231884	148231901	50	-	.	Parent=comp161004_c0_seq1.mrna1;Target=comp161004_c0_seq1 602 594 .
Chr1	stalkie_big_nohaplotig	exon	148232459	148232462	100	-	.	Parent=comp161004_c0_seq1.mrna1;Target=comp161004_c0_seq1 593 590 .
Chr1	stalkie_big_nohaplotig	exon	148246906	148246911	100	-	.	Parent=comp161004_c0_seq1.mrna1;Target=comp161004_c0_seq1 589 584 .
Chr1	stalkie_big_nohaplotig	exon	148258272	148258307	44	-	.	Parent=comp161004_c0_seq1.mrna1;Target=comp161004_c0_seq1 583 560 .
Chr1	stalkie_big_nohaplotig	exon	148262958	148262969	91	-	.	Parent=comp161004_c0_seq1.mrna1;Target=comp161004_c0_seq1 559 549 .
Chr1	stalkie_big_nohaplotig	exon	148270304	148270314	90	-	.	Parent=comp161004_c0_seq1.mrna1;Target=comp161004_c0_seq1 548 538 .
Chr1	stalkie_big_nohaplotig	exon	148275416	148275422	100	-	.	Parent=comp161004_c0_seq1.mrna1;Target=comp161004_c0_seq1 537 531 .
Chr1	stalkie_big_nohaplotig	exon	148297932	148297936	100	-	.	Parent=comp161004_c0_seq1.mrna1;Target=comp161004_c0_seq1 530 526 .
Chr1	stalkie_big_nohaplotig	exon	148305280	148305281	100	-	.	Parent=comp161004_c0_seq1.mrna1;Target=comp161004_c0_seq1 525 524 .
Chr1	stalkie_big_nohaplotig	exon	148308530	148308534	100	-	.	Parent=comp161004_c0_seq1.mrna1;Target=comp161004_c0_seq1 523 519 .
Chr1	stalkie_big_nohaplotig	exon	148309107	148309110	100	-	.	Parent=comp161004_c0_seq1.mrna1;Target=comp161004_c0_seq1 518 515 .
Chr1	stalkie_big_nohaplotig	exon	148310552	148310556	100	-	.	Parent=comp161004_c0_seq1.mrna1;Target=comp161004_c0_seq1 514 510 .
Chr1	stalkie_big_nohaplotig	exon	148327522	148327529	100	-	.	Parent=comp161004_c0_seq1.mrna1;Target=comp161004_c0_seq1 509 502 .
Chr1	stalkie_big_nohaplotig	exon	148343580	148343581	100	-	.	Parent=comp161004_c0_seq1.mrna1;Target=comp161004_c0_seq1 501 500 .
Chr1	stalkie_big_nohaplotig	CDS	148214973	148215089	.	-	0	Parent=comp161004_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148246134	148249515	.	-	.	ID=FBgn0029820.1.mrna1;geneID=FBgn0029820.1.path1;Name=FBgn0029820.1;Dir=sensecoverage=99.5;identity=99.7;matches=1533;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012314
Chr1	stalkie_big_nohaplotig	exon	148246134	148246366	99	-	.	Parent=FBgn0029820.1.mrna1;Target=FBgn0029820.1 1313 1545 +
Chr1	stalkie_big_nohaplotig	exon	148246432	148246598	100	-	.	Parent=FBgn0029820.1.mrna1;Target=FBgn0029820.1 1146 1312 +
Chr1	stalkie_big_nohaplotig	exon	148246657	148246975	99	-	.	Parent=FBgn0029820.1.mrna1;Target=FBgn0029820.1 827 1145 +
Chr1	stalkie_big_nohaplotig	exon	148247043	148247521	99	-	.	Parent=FBgn0029820.1.mrna1;Target=FBgn0029820.1 348 826 +
Chr1	stalkie_big_nohaplotig	exon	148247680	148247844	100	-	.	Parent=FBgn0029820.1.mrna1;Target=FBgn0029820.1 183 347 +
Chr1	stalkie_big_nohaplotig	exon	148249087	148249197	100	-	.	Parent=FBgn0029820.1.mrna1;Target=FBgn0029820.1 72 182 +
Chr1	stalkie_big_nohaplotig	exon	148249453	148249515	100	-	.	Parent=FBgn0029820.1.mrna1;Target=FBgn0029820.1 9 71 +
Chr1	stalkie_big_nohaplotig	CDS	148246134	148246366	.	-	2	Parent=FBgn0029820.1.mrna1;Target=FBgn0029820.1 1313 1545 +
Chr1	stalkie_big_nohaplotig	CDS	148246432	148246598	.	-	1	Parent=FBgn0029820.1.mrna1;Target=FBgn0029820.1 1146 1312 +
Chr1	stalkie_big_nohaplotig	CDS	148246657	148246975	.	-	2	Parent=FBgn0029820.1.mrna1;Target=FBgn0029820.1 827 1145 +
Chr1	stalkie_big_nohaplotig	CDS	148247043	148247521	.	-	1	Parent=FBgn0029820.1.mrna1;Target=FBgn0029820.1 348 826 +
Chr1	stalkie_big_nohaplotig	CDS	148247680	148247844	.	-	1	Parent=FBgn0029820.1.mrna1;Target=FBgn0029820.1 183 347 +
Chr1	stalkie_big_nohaplotig	CDS	148249087	148249197	.	-	1	Parent=FBgn0029820.1.mrna1;Target=FBgn0029820.1 72 182 +
Chr1	stalkie_big_nohaplotig	CDS	148249453	148249514	.	-	0	Parent=FBgn0029820.1.mrna1;Target=FBgn0029820.1 10 71 +
Chr1	gffcl	locus	148227956	148244101	.	+	.	ID=RLOC_00012315;geneIDs=FBgn0000536.1.path1,comp159740_c0_seq1.path1;transcripts=FBgn0000536.1.mrna1,comp159740_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148227956	148243106	.	+	.	ID=FBgn0000536.1.mrna1;geneID=FBgn0000536.1.path1;Name=FBgn0000536.1;Dir=sensecoverage=100.0;identity=99.6;matches=1180;mismatches=4;indels=1;unknowns=0;locus=RLOC_00012315
Chr1	stalkie_big_nohaplotig	exon	148227956	148228231	99	+	.	Parent=FBgn0000536.1.mrna1;Target=FBgn0000536.1 1 276 +
Chr1	stalkie_big_nohaplotig	exon	148241727	148242304	99	+	.	Parent=FBgn0000536.1.mrna1;Target=FBgn0000536.1 277 854 +
Chr1	stalkie_big_nohaplotig	exon	148242777	148243106	99	+	.	Parent=FBgn0000536.1.mrna1;Target=FBgn0000536.1 855 1185 +
Chr1	stalkie_big_nohaplotig	CDS	148227956	148228231	.	+	0	Parent=FBgn0000536.1.mrna1;Target=FBgn0000536.1 1 276 +
Chr1	stalkie_big_nohaplotig	CDS	148241727	148242304	.	+	0	Parent=FBgn0000536.1.mrna1;Target=FBgn0000536.1 277 854 +
Chr1	stalkie_big_nohaplotig	CDS	148242777	148243106	.	+	1	Parent=FBgn0000536.1.mrna1;Target=FBgn0000536.1 855 1185 +
Chr1	stalkie_big_nohaplotig	mRNA	148241727	148244101	.	+	.	ID=comp159740_c0_seq1.mrna1;geneID=comp159740_c0_seq1.path1;Name=comp159740_c0_seq1;Dir=antisensecoverage=41.5;identity=99.8;matches=2303;mismatches=3;indels=2;unknowns=0;Target=comp159740_c0_seq1 4616 5197 .;locus=RLOC_00012315
Chr1	stalkie_big_nohaplotig	exon	148241727	148243226	99	+	.	Parent=comp159740_c0_seq1.mrna1;Target=comp159740_c0_seq1 3697 5197 -
Chr1	stalkie_big_nohaplotig	exon	148243296	148244101	99	+	.	Parent=comp159740_c0_seq1.mrna1;Target=comp159740_c0_seq1 2890 3696 -
Chr1	stalkie_big_nohaplotig	CDS	148241727	148242308	.	+	0	Parent=comp159740_c0_seq1.mrna1
Chr1	gffcl	locus	148260502	148260676	.	+	.	ID=RLOC_00012317;geneIDs=FBgn0030484.1.path1;transcripts=FBgn0030484.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148260502	148260676	.	+	.	ID=FBgn0030484.1.mrna1;geneID=FBgn0030484.1.path1;Name=FBgn0030484.1;Dir=indeterminatecoverage=23.1;identity=99.4;matches=174;mismatches=1;indels=0;unknowns=0;Target=FBgn0030484.1 175 1 .;locus=RLOC_00012317
Chr1	stalkie_big_nohaplotig	exon	148260502	148260676	99	+	.	Parent=FBgn0030484.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148260502	148260676	.	+	0	Parent=FBgn0030484.1.mrna1
Chr1	gffcl	locus	148287799	148287888	.	-	.	ID=RLOC_00012318;geneIDs=FBgn0031011.1.path1;transcripts=FBgn0031011.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148287799	148287888	.	-	.	ID=FBgn0031011.1.mrna1;geneID=FBgn0031011.1.path1;Name=FBgn0031011.1;Dir=indeterminatecoverage=5.0;identity=100.0;matches=90;mismatches=0;indels=0;unknowns=0;Target=FBgn0031011.1 90 1 .;locus=RLOC_00012318
Chr1	stalkie_big_nohaplotig	exon	148287799	148287888	100	-	.	Parent=FBgn0031011.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148287799	148287888	.	-	0	Parent=FBgn0031011.1.mrna1
Chr1	gffcl	locus	148295082	148300784	.	+	.	ID=RLOC_00012319;geneIDs=FBgn0031012.1.path1;transcripts=FBgn0031012.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148295082	148300784	.	+	.	ID=FBgn0031012.1.mrna1;geneID=FBgn0031012.1.path1;Name=FBgn0031012.1;Dir=sensecoverage=100.0;identity=99.8;matches=1784;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012319
Chr1	stalkie_big_nohaplotig	exon	148295082	148295109	100	+	.	Parent=FBgn0031012.1.mrna1;Target=FBgn0031012.1 1 28 +
Chr1	stalkie_big_nohaplotig	exon	148298660	148298898	99	+	.	Parent=FBgn0031012.1.mrna1;Target=FBgn0031012.1 29 267 +
Chr1	stalkie_big_nohaplotig	exon	148298962	148299088	100	+	.	Parent=FBgn0031012.1.mrna1;Target=FBgn0031012.1 268 394 +
Chr1	stalkie_big_nohaplotig	exon	148299195	148299338	100	+	.	Parent=FBgn0031012.1.mrna1;Target=FBgn0031012.1 395 538 +
Chr1	stalkie_big_nohaplotig	exon	148299404	148300320	100	+	.	Parent=FBgn0031012.1.mrna1;Target=FBgn0031012.1 539 1455 +
Chr1	stalkie_big_nohaplotig	exon	148300383	148300572	100	+	.	Parent=FBgn0031012.1.mrna1;Target=FBgn0031012.1 1456 1645 +
Chr1	stalkie_big_nohaplotig	exon	148300642	148300784	98	+	.	Parent=FBgn0031012.1.mrna1;Target=FBgn0031012.1 1646 1788 +
Chr1	stalkie_big_nohaplotig	CDS	148295082	148295109	.	+	0	Parent=FBgn0031012.1.mrna1;Target=FBgn0031012.1 1 28 +
Chr1	stalkie_big_nohaplotig	CDS	148298660	148298898	.	+	2	Parent=FBgn0031012.1.mrna1;Target=FBgn0031012.1 29 267 +
Chr1	stalkie_big_nohaplotig	CDS	148298962	148299088	.	+	0	Parent=FBgn0031012.1.mrna1;Target=FBgn0031012.1 268 394 +
Chr1	stalkie_big_nohaplotig	CDS	148299195	148299338	.	+	2	Parent=FBgn0031012.1.mrna1;Target=FBgn0031012.1 395 538 +
Chr1	stalkie_big_nohaplotig	CDS	148299404	148300320	.	+	2	Parent=FBgn0031012.1.mrna1;Target=FBgn0031012.1 539 1455 +
Chr1	stalkie_big_nohaplotig	CDS	148300383	148300572	.	+	0	Parent=FBgn0031012.1.mrna1;Target=FBgn0031012.1 1456 1645 +
Chr1	stalkie_big_nohaplotig	CDS	148300642	148300784	.	+	2	Parent=FBgn0031012.1.mrna1;Target=FBgn0031012.1 1646 1788 +
Chr1	gffcl	locus	148403824	148420042	.	-	.	ID=RLOC_00012320;geneIDs=comp149493_c1_seq1.path1;transcripts=comp149493_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148403824	148420042	.	-	.	ID=comp149493_c1_seq1.mrna1;geneID=comp149493_c1_seq1.path1;Name=comp149493_c1_seq1;Dir=sensecoverage=98.4;identity=98.5;matches=785;mismatches=6;indels=6;unknowns=0;Target=comp149493_c1_seq1 14 166 +;locus=RLOC_00012320
Chr1	stalkie_big_nohaplotig	exon	148403824	148404005	100	-	.	Parent=comp149493_c1_seq1.mrna1;Target=comp149493_c1_seq1 623 804 +
Chr1	stalkie_big_nohaplotig	exon	148419428	148420042	98	-	.	Parent=comp149493_c1_seq1.mrna1;Target=comp149493_c1_seq1 14 622 +
Chr1	stalkie_big_nohaplotig	CDS	148419884	148420042	.	-	0	Parent=comp149493_c1_seq1.mrna1
Chr1	gffcl	locus	148459984	148460925	.	+	.	ID=RLOC_00012321;geneIDs=FBgn0030142.1.path1;transcripts=FBgn0030142.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148459984	148460925	.	+	.	ID=FBgn0030142.1.mrna1;geneID=FBgn0030142.1.path1;Name=FBgn0030142.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=935;mismatches=7;indels=0;unknowns=0;Target=FBgn0030142.1 942 1 .;locus=RLOC_00012321
Chr1	stalkie_big_nohaplotig	exon	148459984	148460925	99	+	.	Parent=FBgn0030142.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148459984	148460925	.	+	0	Parent=FBgn0030142.1.mrna1
Chr1	gffcl	locus	148461500	148464610	.	-	.	ID=RLOC_00012322;geneIDs=FBgn0030141.1.path1;transcripts=FBgn0030141.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148461500	148464610	.	-	.	ID=FBgn0030141.1.mrna1;geneID=FBgn0030141.1.path1;Name=FBgn0030141.1;Dir=sensecoverage=100.0;identity=98.7;matches=2005;mismatches=14;indels=12;unknowns=0;locus=RLOC_00012322
Chr1	stalkie_big_nohaplotig	exon	148461500	148461709	99	-	.	Parent=FBgn0030141.1.mrna1;Target=FBgn0030141.1 1816 2025 +
Chr1	stalkie_big_nohaplotig	exon	148461776	148462244	99	-	.	Parent=FBgn0030141.1.mrna1;Target=FBgn0030141.1 1347 1815 +
Chr1	stalkie_big_nohaplotig	exon	148463002	148463497	99	-	.	Parent=FBgn0030141.1.mrna1;Target=FBgn0030141.1 851 1346 +
Chr1	stalkie_big_nohaplotig	exon	148463559	148463796	94	-	.	Parent=FBgn0030141.1.mrna1;Target=FBgn0030141.1 613 850 +
Chr1	stalkie_big_nohaplotig	exon	148463856	148464230	100	-	.	Parent=FBgn0030141.1.mrna1;Target=FBgn0030141.1 238 612 +
Chr1	stalkie_big_nohaplotig	exon	148464304	148464464	98	-	.	Parent=FBgn0030141.1.mrna1;Target=FBgn0030141.1 77 237 +
Chr1	stalkie_big_nohaplotig	exon	148464535	148464610	100	-	.	Parent=FBgn0030141.1.mrna1;Target=FBgn0030141.1 1 76 +
Chr1	stalkie_big_nohaplotig	CDS	148461500	148461709	.	-	0	Parent=FBgn0030141.1.mrna1;Target=FBgn0030141.1 1816 2025 +
Chr1	stalkie_big_nohaplotig	CDS	148461776	148462244	.	-	1	Parent=FBgn0030141.1.mrna1;Target=FBgn0030141.1 1347 1815 +
Chr1	stalkie_big_nohaplotig	CDS	148463002	148463497	.	-	2	Parent=FBgn0030141.1.mrna1;Target=FBgn0030141.1 851 1346 +
Chr1	stalkie_big_nohaplotig	CDS	148463559	148463796	.	-	0	Parent=FBgn0030141.1.mrna1;Target=FBgn0030141.1 613 850 +
Chr1	stalkie_big_nohaplotig	CDS	148463856	148464230	.	-	0	Parent=FBgn0030141.1.mrna1;Target=FBgn0030141.1 238 612 +
Chr1	stalkie_big_nohaplotig	CDS	148464304	148464464	.	-	2	Parent=FBgn0030141.1.mrna1;Target=FBgn0030141.1 77 237 +
Chr1	stalkie_big_nohaplotig	CDS	148464535	148464610	.	-	0	Parent=FBgn0030141.1.mrna1;Target=FBgn0030141.1 1 76 +
Chr1	gffcl	locus	148464874	148468601	.	+	.	ID=RLOC_00012323;geneIDs=FBgn0030514.1.path1;transcripts=FBgn0030514.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148464874	148468601	.	+	.	ID=FBgn0030514.1.mrna1;geneID=FBgn0030514.1.path1;Name=FBgn0030514.1;Dir=sensecoverage=100.0;identity=99.4;matches=2233;mismatches=14;indels=0;unknowns=0;locus=RLOC_00012323
Chr1	stalkie_big_nohaplotig	exon	148464874	148465725	99	+	.	Parent=FBgn0030514.1.mrna1;Target=FBgn0030514.1 1 852 +
Chr1	stalkie_big_nohaplotig	exon	148465846	148466213	99	+	.	Parent=FBgn0030514.1.mrna1;Target=FBgn0030514.1 853 1220 +
Chr1	stalkie_big_nohaplotig	exon	148467510	148468369	98	+	.	Parent=FBgn0030514.1.mrna1;Target=FBgn0030514.1 1221 2080 +
Chr1	stalkie_big_nohaplotig	exon	148468435	148468601	100	+	.	Parent=FBgn0030514.1.mrna1;Target=FBgn0030514.1 2081 2247 +
Chr1	stalkie_big_nohaplotig	CDS	148464874	148465725	.	+	0	Parent=FBgn0030514.1.mrna1;Target=FBgn0030514.1 1 852 +
Chr1	stalkie_big_nohaplotig	CDS	148465846	148466213	.	+	0	Parent=FBgn0030514.1.mrna1;Target=FBgn0030514.1 853 1220 +
Chr1	stalkie_big_nohaplotig	CDS	148467510	148468369	.	+	1	Parent=FBgn0030514.1.mrna1;Target=FBgn0030514.1 1221 2080 +
Chr1	stalkie_big_nohaplotig	CDS	148468435	148468601	.	+	2	Parent=FBgn0030514.1.mrna1;Target=FBgn0030514.1 2081 2247 +
Chr1	gffcl	locus	148468922	148479854	.	-	.	ID=RLOC_00012324;geneIDs=FBgn0000057.2.path1;transcripts=FBgn0000057.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148468922	148479854	.	-	.	ID=FBgn0000057.2.mrna1;geneID=FBgn0000057.2.path1;Name=FBgn0000057.2;Dir=sensecoverage=100.0;identity=99.2;matches=2178;mismatches=18;indels=0;unknowns=0;locus=RLOC_00012324
Chr1	stalkie_big_nohaplotig	exon	148468922	148469287	98	-	.	Parent=FBgn0000057.2.mrna1;Target=FBgn0000057.2 1831 2196 +
Chr1	stalkie_big_nohaplotig	exon	148470579	148471120	99	-	.	Parent=FBgn0000057.2.mrna1;Target=FBgn0000057.2 1289 1830 +
Chr1	stalkie_big_nohaplotig	exon	148471189	148471853	98	-	.	Parent=FBgn0000057.2.mrna1;Target=FBgn0000057.2 624 1288 +
Chr1	stalkie_big_nohaplotig	exon	148473410	148473893	99	-	.	Parent=FBgn0000057.2.mrna1;Target=FBgn0000057.2 140 623 +
Chr1	stalkie_big_nohaplotig	exon	148473955	148474060	100	-	.	Parent=FBgn0000057.2.mrna1;Target=FBgn0000057.2 34 139 +
Chr1	stalkie_big_nohaplotig	exon	148479822	148479854	100	-	.	Parent=FBgn0000057.2.mrna1;Target=FBgn0000057.2 1 33 +
Chr1	stalkie_big_nohaplotig	CDS	148468922	148469287	.	-	0	Parent=FBgn0000057.2.mrna1;Target=FBgn0000057.2 1831 2196 +
Chr1	stalkie_big_nohaplotig	CDS	148470579	148471120	.	-	2	Parent=FBgn0000057.2.mrna1;Target=FBgn0000057.2 1289 1830 +
Chr1	stalkie_big_nohaplotig	CDS	148471189	148471853	.	-	1	Parent=FBgn0000057.2.mrna1;Target=FBgn0000057.2 624 1288 +
Chr1	stalkie_big_nohaplotig	CDS	148473410	148473893	.	-	2	Parent=FBgn0000057.2.mrna1;Target=FBgn0000057.2 140 623 +
Chr1	stalkie_big_nohaplotig	CDS	148473955	148474060	.	-	0	Parent=FBgn0000057.2.mrna1;Target=FBgn0000057.2 34 139 +
Chr1	stalkie_big_nohaplotig	CDS	148479822	148479854	.	-	0	Parent=FBgn0000057.2.mrna1;Target=FBgn0000057.2 1 33 +
Chr1	gffcl	locus	148485308	148486225	.	-	.	ID=RLOC_00012325;geneIDs=ORF3030.path1,comp155797_c1_seq1.path1;transcripts=ORF3030.mrna1,comp155797_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148485308	148486204	.	-	.	ID=ORF3030.mrna1;geneID=ORF3030.path1;Name=ORF3030;Dir=sensecoverage=100.0;identity=96.4;matches=749;mismatches=10;indels=18;unknowns=0;locus=RLOC_00012325
Chr1	stalkie_big_nohaplotig	exon	148485308	148485498	89	-	.	Parent=ORF3030.mrna1;Target=ORF3030 569 777 +
Chr1	stalkie_big_nohaplotig	exon	148485563	148485896	100	-	.	Parent=ORF3030.mrna1;Target=ORF3030 235 568 +
Chr1	stalkie_big_nohaplotig	exon	148485971	148486204	97	-	.	Parent=ORF3030.mrna1;Target=ORF3030 1 234 +
Chr1	stalkie_big_nohaplotig	CDS	148485308	148485498	.	-	2	Parent=ORF3030.mrna1;Target=ORF3030 569 777 +
Chr1	stalkie_big_nohaplotig	CDS	148485563	148485896	.	-	0	Parent=ORF3030.mrna1;Target=ORF3030 235 568 +
Chr1	stalkie_big_nohaplotig	CDS	148485971	148486204	.	-	0	Parent=ORF3030.mrna1;Target=ORF3030 1 234 +
Chr1	stalkie_big_nohaplotig	mRNA	148485315	148486225	.	-	.	ID=comp155797_c1_seq1.mrna1;geneID=comp155797_c1_seq1.path1;Name=comp155797_c1_seq1;Dir=antisensecoverage=94.8;identity=98.8;matches=837;mismatches=10;indels=0;unknowns=0;locus=RLOC_00012325
Chr1	stalkie_big_nohaplotig	exon	148485315	148485498	97	-	.	Parent=comp155797_c1_seq1.mrna1;Target=comp155797_c1_seq1 28 211 -
Chr1	stalkie_big_nohaplotig	exon	148485563	148486225	99	-	.	Parent=comp155797_c1_seq1.mrna1;Target=comp155797_c1_seq1 212 874 -
Chr1	stalkie_big_nohaplotig	CDS	148485317	148485498	.	-	2	Parent=comp155797_c1_seq1.mrna1;Target=comp155797_c1_seq1 30 211 .
Chr1	stalkie_big_nohaplotig	CDS	148485563	148485824	.	-	0	Parent=comp155797_c1_seq1.mrna1;Target=comp155797_c1_seq1 212 473 .
Chr1	gffcl	locus	148487827	148488750	.	+	.	ID=RLOC_00012326;geneIDs=FBgn0034503.1.path1;transcripts=FBgn0034503.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148487827	148488750	.	+	.	ID=FBgn0034503.1.mrna1;geneID=FBgn0034503.1.path1;Name=FBgn0034503.1;Dir=sensecoverage=100.0;identity=100.0;matches=777;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012326
Chr1	stalkie_big_nohaplotig	exon	148487827	148488012	100	+	.	Parent=FBgn0034503.1.mrna1;Target=FBgn0034503.1 1 186 +
Chr1	stalkie_big_nohaplotig	exon	148488097	148488439	100	+	.	Parent=FBgn0034503.1.mrna1;Target=FBgn0034503.1 187 529 +
Chr1	stalkie_big_nohaplotig	exon	148488503	148488750	100	+	.	Parent=FBgn0034503.1.mrna1;Target=FBgn0034503.1 530 777 +
Chr1	stalkie_big_nohaplotig	CDS	148487827	148488012	.	+	0	Parent=FBgn0034503.1.mrna1;Target=FBgn0034503.1 1 186 +
Chr1	stalkie_big_nohaplotig	CDS	148488097	148488439	.	+	0	Parent=FBgn0034503.1.mrna1;Target=FBgn0034503.1 187 529 +
Chr1	stalkie_big_nohaplotig	CDS	148488503	148488750	.	+	2	Parent=FBgn0034503.1.mrna1;Target=FBgn0034503.1 530 777 +
Chr1	gffcl	locus	148489521	148490599	.	-	.	ID=RLOC_00012327;geneIDs=FBgn0024920.1.path1;transcripts=FBgn0024920.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148489521	148490599	.	-	.	ID=FBgn0024920.1.mrna1;geneID=FBgn0024920.1.path1;Name=FBgn0024920.1;Dir=sensecoverage=100.0;identity=98.9;matches=1003;mismatches=11;indels=0;unknowns=0;locus=RLOC_00012327
Chr1	stalkie_big_nohaplotig	exon	148489521	148490329	99	-	.	Parent=FBgn0024920.1.mrna1;Target=FBgn0024920.1 206 1014 +
Chr1	stalkie_big_nohaplotig	exon	148490395	148490599	98	-	.	Parent=FBgn0024920.1.mrna1;Target=FBgn0024920.1 1 205 +
Chr1	stalkie_big_nohaplotig	CDS	148489521	148490329	.	-	2	Parent=FBgn0024920.1.mrna1;Target=FBgn0024920.1 206 1014 +
Chr1	stalkie_big_nohaplotig	CDS	148490395	148490599	.	-	0	Parent=FBgn0024920.1.mrna1;Target=FBgn0024920.1 1 205 +
Chr1	gffcl	locus	148493203	148493477	.	-	.	ID=RLOC_00012328;geneIDs=comp606156_c0_seq1.path1;transcripts=comp606156_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148493203	148493477	.	-	.	ID=comp606156_c0_seq1.mrna1;geneID=comp606156_c0_seq1.path1;Name=comp606156_c0_seq1;Dir=indeterminatecoverage=91.2;identity=98.5;matches=271;mismatches=0;indels=4;unknowns=0;Target=comp606156_c0_seq1 293 23 .;CDS_Target=comp606156_c0_seq1 212 24 .;locus=RLOC_00012328
Chr1	stalkie_big_nohaplotig	exon	148493203	148493477	98	-	.	Parent=comp606156_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148493284	148493476	.	-	0	Parent=comp606156_c0_seq1.mrna1
Chr1	gffcl	locus	148496646	148499664	.	-	.	ID=RLOC_00012329;geneIDs=FBgn0029738.1.path1;transcripts=FBgn0029738.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148496646	148499664	.	-	.	ID=FBgn0029738.1.mrna1;geneID=FBgn0029738.1.path1;Name=FBgn0029738.1;Dir=sensecoverage=99.7;identity=99.5;matches=1475;mismatches=2;indels=6;unknowns=0;locus=RLOC_00012329
Chr1	stalkie_big_nohaplotig	exon	148496646	148497188	99	-	.	Parent=FBgn0029738.1.mrna1;Target=FBgn0029738.1 940 1482 +
Chr1	stalkie_big_nohaplotig	exon	148497263	148497427	100	-	.	Parent=FBgn0029738.1.mrna1;Target=FBgn0029738.1 775 939 +
Chr1	stalkie_big_nohaplotig	exon	148498821	148499171	100	-	.	Parent=FBgn0029738.1.mrna1;Target=FBgn0029738.1 424 774 +
Chr1	stalkie_big_nohaplotig	exon	148499241	148499664	98	-	.	Parent=FBgn0029738.1.mrna1;Target=FBgn0029738.1 6 423 +
Chr1	stalkie_big_nohaplotig	CDS	148496646	148497188	.	-	0	Parent=FBgn0029738.1.mrna1;Target=FBgn0029738.1 940 1482 +
Chr1	stalkie_big_nohaplotig	CDS	148497263	148497427	.	-	0	Parent=FBgn0029738.1.mrna1;Target=FBgn0029738.1 775 939 +
Chr1	stalkie_big_nohaplotig	CDS	148498821	148499171	.	-	0	Parent=FBgn0029738.1.mrna1;Target=FBgn0029738.1 424 774 +
Chr1	stalkie_big_nohaplotig	CDS	148499241	148499663	.	-	0	Parent=FBgn0029738.1.mrna1;Target=FBgn0029738.1 7 423 +
Chr1	gffcl	locus	148500718	148506190	.	-	.	ID=RLOC_00012330;geneIDs=comp148402_c0_seq1.path1;transcripts=comp148402_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148500718	148506190	.	-	.	ID=comp148402_c0_seq1.mrna1;geneID=comp148402_c0_seq1.path1;Name=comp148402_c0_seq1;Dir=antisensecoverage=99.8;identity=99.0;matches=608;mismatches=6;indels=0;unknowns=0;Target=comp148402_c0_seq1 161 310 .;locus=RLOC_00012330
Chr1	stalkie_big_nohaplotig	exon	148500718	148500741	100	-	.	Parent=comp148402_c0_seq1.mrna1;Target=comp148402_c0_seq1 1 24 -
Chr1	stalkie_big_nohaplotig	exon	148505601	148506190	98	-	.	Parent=comp148402_c0_seq1.mrna1;Target=comp148402_c0_seq1 25 614 -
Chr1	stalkie_big_nohaplotig	CDS	148505737	148505886	.	-	0	Parent=comp148402_c0_seq1.mrna1
Chr1	gffcl	locus	148501210	148501843	.	-	.	ID=RLOC_00012331;geneIDs=comp143802_c1_seq1.path1;transcripts=comp143802_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148501210	148501843	.	-	.	ID=comp143802_c1_seq1.mrna1;geneID=comp143802_c1_seq1.path1;Name=comp143802_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=621;mismatches=4;indels=9;unknowns=0;Target=comp143802_c1_seq1 625 1 .;CDS_Target=comp143802_c1_seq1 509 411 .;locus=RLOC_00012331
Chr1	stalkie_big_nohaplotig	exon	148501210	148501843	97	-	.	Parent=comp143802_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148501326	148501424	.	-	0	Parent=comp143802_c1_seq1.mrna1
Chr1	gffcl	locus	148503157	148514363	.	+	.	ID=RLOC_00012332;geneIDs=ORF512.path1;transcripts=ORF512.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148503157	148514363	.	+	.	ID=ORF512.mrna1;geneID=ORF512.path1;Name=ORF512;Dir=sensecoverage=100.0;identity=99.7;matches=1696;mismatches=5;indels=0;unknowns=0;locus=RLOC_00012332
Chr1	stalkie_big_nohaplotig	exon	148503157	148503223	100	+	.	Parent=ORF512.mrna1;Target=ORF512 1 67 +
Chr1	stalkie_big_nohaplotig	exon	148511386	148511554	100	+	.	Parent=ORF512.mrna1;Target=ORF512 68 236 +
Chr1	stalkie_big_nohaplotig	exon	148511615	148511848	99	+	.	Parent=ORF512.mrna1;Target=ORF512 237 470 +
Chr1	stalkie_big_nohaplotig	exon	148512306	148512619	100	+	.	Parent=ORF512.mrna1;Target=ORF512 471 784 +
Chr1	stalkie_big_nohaplotig	exon	148512713	148512842	100	+	.	Parent=ORF512.mrna1;Target=ORF512 785 914 +
Chr1	stalkie_big_nohaplotig	exon	148512904	148513091	100	+	.	Parent=ORF512.mrna1;Target=ORF512 915 1102 +
Chr1	stalkie_big_nohaplotig	exon	148513150	148513437	100	+	.	Parent=ORF512.mrna1;Target=ORF512 1103 1390 +
Chr1	stalkie_big_nohaplotig	exon	148513983	148514118	99	+	.	Parent=ORF512.mrna1;Target=ORF512 1391 1526 +
Chr1	stalkie_big_nohaplotig	exon	148514189	148514363	98	+	.	Parent=ORF512.mrna1;Target=ORF512 1527 1701 +
Chr1	stalkie_big_nohaplotig	CDS	148503157	148503223	.	+	0	Parent=ORF512.mrna1;Target=ORF512 1 67 +
Chr1	stalkie_big_nohaplotig	CDS	148511386	148511554	.	+	2	Parent=ORF512.mrna1;Target=ORF512 68 236 +
Chr1	stalkie_big_nohaplotig	CDS	148511615	148511848	.	+	1	Parent=ORF512.mrna1;Target=ORF512 237 470 +
Chr1	stalkie_big_nohaplotig	CDS	148512306	148512619	.	+	1	Parent=ORF512.mrna1;Target=ORF512 471 784 +
Chr1	stalkie_big_nohaplotig	CDS	148512713	148512842	.	+	2	Parent=ORF512.mrna1;Target=ORF512 785 914 +
Chr1	stalkie_big_nohaplotig	CDS	148512904	148513091	.	+	1	Parent=ORF512.mrna1;Target=ORF512 915 1102 +
Chr1	stalkie_big_nohaplotig	CDS	148513150	148513437	.	+	2	Parent=ORF512.mrna1;Target=ORF512 1103 1390 +
Chr1	stalkie_big_nohaplotig	CDS	148513983	148514118	.	+	2	Parent=ORF512.mrna1;Target=ORF512 1391 1526 +
Chr1	stalkie_big_nohaplotig	CDS	148514189	148514363	.	+	1	Parent=ORF512.mrna1;Target=ORF512 1527 1701 +
Chr1	gffcl	locus	148504456	148504690	.	+	.	ID=RLOC_00012333;geneIDs=comp137836_c0_seq1.path1;transcripts=comp137836_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148504456	148504690	.	+	.	ID=comp137836_c0_seq1.mrna1;geneID=comp137836_c0_seq1.path1;Name=comp137836_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.2;matches=234;mismatches=1;indels=1;unknowns=0;Target=comp137836_c0_seq1 237 2 .;CDS_Target=comp137836_c0_seq1 59 3 .;locus=RLOC_00012333
Chr1	stalkie_big_nohaplotig	exon	148504456	148504690	99	+	.	Parent=comp137836_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148504457	148504513	.	+	0	Parent=comp137836_c0_seq1.mrna1
Chr1	gffcl	locus	148527182	148527766	.	+	.	ID=RLOC_00012334;geneIDs=comp156957_c0_seq1.path1;transcripts=comp156957_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148527182	148527766	.	+	.	ID=comp156957_c0_seq1.mrna1;geneID=comp156957_c0_seq1.path1;Name=comp156957_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.2;matches=561;mismatches=21;indels=20;unknowns=0;Target=comp156957_c0_seq1 599 1 .;CDS_Target=comp156957_c0_seq1 262 206 .;locus=RLOC_00012334
Chr1	stalkie_big_nohaplotig	exon	148527182	148527766	93	+	.	Parent=comp156957_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148527389	148527444	.	+	0	Parent=comp156957_c0_seq1.mrna1
Chr1	gffcl	locus	148528162	148529094	.	+	.	ID=RLOC_00012335;geneIDs=comp160150_c0_seq1.path1;transcripts=comp160150_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148528162	148529094	.	+	.	ID=comp160150_c0_seq1.mrna1;geneID=comp160150_c0_seq1.path1;Name=comp160150_c0_seq1;Dir=indeterminatecoverage=98.5;identity=96.2;matches=900;mismatches=32;indels=4;unknowns=0;Target=comp160150_c0_seq1 935 1 .;CDS_Target=comp160150_c0_seq1 638 465 .;locus=RLOC_00012335
Chr1	stalkie_big_nohaplotig	exon	148528162	148529094	96	+	.	Parent=comp160150_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148528624	148528797	.	+	0	Parent=comp160150_c0_seq1.mrna1
Chr1	gffcl	locus	148534361	148536421	.	-	.	ID=RLOC_00012336;geneIDs=FBgn0030532.1.path1;transcripts=FBgn0030532.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148534361	148536421	.	-	.	ID=FBgn0030532.1.mrna1;geneID=FBgn0030532.1.path1;Name=FBgn0030532.1;Dir=sensecoverage=100.0;identity=99.7;matches=1860;mismatches=6;indels=0;unknowns=0;locus=RLOC_00012336
Chr1	stalkie_big_nohaplotig	exon	148534361	148534631	99	-	.	Parent=FBgn0030532.1.mrna1;Target=FBgn0030532.1 1596 1866 +
Chr1	stalkie_big_nohaplotig	exon	148534703	148535019	99	-	.	Parent=FBgn0030532.1.mrna1;Target=FBgn0030532.1 1279 1595 +
Chr1	stalkie_big_nohaplotig	exon	148535144	148536421	99	-	.	Parent=FBgn0030532.1.mrna1;Target=FBgn0030532.1 1 1278 +
Chr1	stalkie_big_nohaplotig	CDS	148534361	148534631	.	-	1	Parent=FBgn0030532.1.mrna1;Target=FBgn0030532.1 1596 1866 +
Chr1	stalkie_big_nohaplotig	CDS	148534703	148535019	.	-	0	Parent=FBgn0030532.1.mrna1;Target=FBgn0030532.1 1279 1595 +
Chr1	stalkie_big_nohaplotig	CDS	148535144	148536421	.	-	0	Parent=FBgn0030532.1.mrna1;Target=FBgn0030532.1 1 1278 +
Chr1	gffcl	locus	148537454	148538368	.	-	.	ID=RLOC_00012337;geneIDs=ORF2116.path1;transcripts=ORF2116.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148537454	148538368	.	-	.	ID=ORF2116.mrna1;geneID=ORF2116.path1;Name=ORF2116;Dir=indeterminatecoverage=100.0;identity=98.9;matches=905;mismatches=10;indels=0;unknowns=0;Target=ORF2116 915 1 .;locus=RLOC_00012337
Chr1	stalkie_big_nohaplotig	exon	148537454	148538368	98	-	.	Parent=ORF2116.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148537454	148538368	.	-	0	Parent=ORF2116.mrna1
Chr1	gffcl	locus	148542187	148542628	.	-	.	ID=RLOC_00012338;geneIDs=comp135170_c1_seq1.path1;transcripts=comp135170_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148542187	148542628	.	-	.	ID=comp135170_c1_seq1.mrna1;geneID=comp135170_c1_seq1.path1;Name=comp135170_c1_seq1;Dir=indeterminatecoverage=98.7;identity=99.5;matches=440;mismatches=2;indels=0;unknowns=0;Target=comp135170_c1_seq1 442 1 .;CDS_Target=comp135170_c1_seq1 297 97 .;locus=RLOC_00012338
Chr1	stalkie_big_nohaplotig	exon	148542187	148542628	99	-	.	Parent=comp135170_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148542332	148542532	.	-	0	Parent=comp135170_c1_seq1.mrna1
Chr1	gffcl	locus	148542952	148543400	.	+	.	ID=RLOC_00012339;geneIDs=comp156701_c0_seq1.path1;transcripts=comp156701_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148542952	148543400	.	+	.	ID=comp156701_c0_seq1.mrna1;geneID=comp156701_c0_seq1.path1;Name=comp156701_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=449;mismatches=0;indels=1;unknowns=0;Target=comp156701_c0_seq1 450 1 .;CDS_Target=comp156701_c0_seq1 391 317 .;locus=RLOC_00012339
Chr1	stalkie_big_nohaplotig	exon	148542952	148543400	99	+	.	Parent=comp156701_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148543267	148543341	.	+	0	Parent=comp156701_c0_seq1.mrna1
Chr1	gffcl	locus	148543834	148544746	.	+	.	ID=RLOC_00012340;geneIDs=comp161356_c0_seq1.path1;transcripts=comp161356_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148543834	148544746	.	+	.	ID=comp161356_c0_seq1.mrna1;geneID=comp161356_c0_seq1.path1;Name=comp161356_c0_seq1;Dir=indeterminatecoverage=90.6;identity=91.9;matches=870;mismatches=33;indels=44;unknowns=0;Target=comp161356_c0_seq1 989 53 .;CDS_Target=comp161356_c0_seq1 738 622 .;locus=RLOC_00012340
Chr1	stalkie_big_nohaplotig	exon	148543834	148544746	91	+	.	Parent=comp161356_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148544412	148544528	.	+	0	Parent=comp161356_c0_seq1.mrna1
Chr1	gffcl	locus	148546477	148546817	.	-	.	ID=RLOC_00012341;geneIDs=comp150235_c0_seq1.path1;transcripts=comp150235_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148546477	148546817	.	-	.	ID=comp150235_c0_seq1.mrna1;geneID=comp150235_c0_seq1.path1;Name=comp150235_c0_seq1;Dir=indeterminatecoverage=97.4;identity=81.8;matches=279;mismatches=20;indels=42;unknowns=0;Target=comp150235_c0_seq1 300 2 .;CDS_Target=comp150235_c0_seq1 47 3 .;locus=RLOC_00012341
Chr1	stalkie_big_nohaplotig	exon	148546477	148546817	81	-	.	Parent=comp150235_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148546772	148546816	.	-	0	Parent=comp150235_c0_seq1.mrna1
Chr1	gffcl	locus	148547750	148548332	.	+	.	ID=RLOC_00012342;geneIDs=comp161343_c1_seq1.path1;transcripts=comp161343_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148547750	148548332	.	+	.	ID=comp161343_c1_seq1.mrna1;geneID=comp161343_c1_seq1.path1;Name=comp161343_c1_seq1;Dir=indeterminatecoverage=99.7;identity=97.1;matches=567;mismatches=15;indels=2;unknowns=0;Target=comp161343_c1_seq1 585 3 .;CDS_Target=comp161343_c1_seq1 580 464 .;locus=RLOC_00012342
Chr1	stalkie_big_nohaplotig	exon	148547750	148548332	97	+	.	Parent=comp161343_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148548211	148548327	.	+	0	Parent=comp161343_c1_seq1.mrna1
Chr1	gffcl	locus	148569914	148570700	.	+	.	ID=RLOC_00012343;geneIDs=FBgn0263115.path2;transcripts=FBgn0263115.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	148569914	148570700	.	+	.	ID=FBgn0263115.mrna2;geneID=FBgn0263115.path2;Name=FBgn0263115;Dir=sensecoverage=72.0;identity=99.7;matches=687;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012343
Chr1	stalkie_big_nohaplotig	exon	148569914	148570105	100	+	.	Parent=FBgn0263115.mrna2;Target=FBgn0263115 154 345 +
Chr1	stalkie_big_nohaplotig	exon	148570204	148570700	99	+	.	Parent=FBgn0263115.mrna2;Target=FBgn0263115 346 842 +
Chr1	stalkie_big_nohaplotig	CDS	148569914	148570105	.	+	0	Parent=FBgn0263115.mrna2;Target=FBgn0263115 154 345 +
Chr1	stalkie_big_nohaplotig	CDS	148570204	148570698	.	+	0	Parent=FBgn0263115.mrna2;Target=FBgn0263115 346 840 +
Chr1	gffcl	locus	148578103	148578801	.	-	.	ID=RLOC_00012344;geneIDs=comp152779_c0_seq1.path1;transcripts=comp152779_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148578103	148578801	.	-	.	ID=comp152779_c0_seq1.mrna1;geneID=comp152779_c0_seq1.path1;Name=comp152779_c0_seq1;Dir=sensecoverage=98.9;identity=100.0;matches=608;mismatches=0;indels=0;unknowns=0;Target=comp152779_c0_seq1 92 373 +;locus=RLOC_00012344
Chr1	stalkie_big_nohaplotig	exon	148578103	148578642	100	-	.	Parent=comp152779_c0_seq1.mrna1;Target=comp152779_c0_seq1 70 609 +
Chr1	stalkie_big_nohaplotig	exon	148578734	148578801	100	-	.	Parent=comp152779_c0_seq1.mrna1;Target=comp152779_c0_seq1 2 69 +
Chr1	stalkie_big_nohaplotig	CDS	148578339	148578620	.	-	0	Parent=comp152779_c0_seq1.mrna1
Chr1	gffcl	locus	148601788	148602749	.	-	.	ID=RLOC_00012345;geneIDs=comp146245_c0_seq1.path1;transcripts=comp146245_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148601788	148602749	.	-	.	ID=comp146245_c0_seq1.mrna1;geneID=comp146245_c0_seq1.path1;Name=comp146245_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=960;mismatches=1;indels=5;unknowns=0;Target=comp146245_c0_seq1 965 1 .;CDS_Target=comp146245_c0_seq1 965 849 .;locus=RLOC_00012345
Chr1	stalkie_big_nohaplotig	exon	148601788	148602749	99	-	.	Parent=comp146245_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148601788	148601904	.	-	0	Parent=comp146245_c0_seq1.mrna1
Chr1	gffcl	locus	148603252	148605185	.	+	.	ID=RLOC_00012346;geneIDs=comp162205_c0_seq1.path1;transcripts=comp162205_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148603252	148605185	.	+	.	ID=comp162205_c0_seq1.mrna1;geneID=comp162205_c0_seq1.path1;Name=comp162205_c0_seq1;Dir=indeterminatecoverage=96.2;identity=91.1;matches=1695;mismatches=46;indels=119;unknowns=0;Target=comp162205_c0_seq1 1252 1175 .;locus=RLOC_00012346
Chr1	stalkie_big_nohaplotig	exon	148603252	148603995	96	+	.	Parent=comp162205_c0_seq1.mrna1;Target=comp162205_c0_seq1 819 74 .
Chr1	stalkie_big_nohaplotig	exon	148604179	148605185	87	+	.	Parent=comp162205_c0_seq1.mrna1;Target=comp162205_c0_seq1 1923 820 .
Chr1	stalkie_big_nohaplotig	CDS	148604484	148604541	.	+	0	Parent=comp162205_c0_seq1.mrna1
Chr1	gffcl	locus	148606672	148607266	.	+	.	ID=RLOC_00012347;geneIDs=comp145773_c0_seq1.path1;transcripts=comp145773_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148606672	148607266	.	+	.	ID=comp145773_c0_seq1.mrna1;geneID=comp145773_c0_seq1.path1;Name=comp145773_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=594;mismatches=1;indels=5;unknowns=0;Target=comp145773_c0_seq1 600 1 .;CDS_Target=comp145773_c0_seq1 70 2 .;locus=RLOC_00012347
Chr1	stalkie_big_nohaplotig	exon	148606672	148607266	99	+	.	Parent=comp145773_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148606673	148606741	.	+	0	Parent=comp145773_c0_seq1.mrna1
Chr1	gffcl	locus	148642992	148643807	.	+	.	ID=RLOC_00012348;geneIDs=comp155268_c0_seq1.path1;transcripts=comp155268_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148642992	148643807	.	+	.	ID=comp155268_c0_seq1.mrna1;geneID=comp155268_c0_seq1.path1;Name=comp155268_c0_seq1;Dir=indeterminatecoverage=76.0;identity=90.1;matches=782;mismatches=21;indels=65;unknowns=0;Target=comp155268_c0_seq1 855 1 .;CDS_Target=comp155268_c0_seq1 56 3 .;locus=RLOC_00012348
Chr1	stalkie_big_nohaplotig	exon	148642992	148643807	90	+	.	Parent=comp155268_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148642994	148643047	.	+	0	Parent=comp155268_c0_seq1.mrna1
Chr1	gffcl	locus	148644079	148645213	.	-	.	ID=RLOC_00012349;geneIDs=comp115871_c0_seq1.path1;transcripts=comp115871_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148644079	148645213	.	-	.	ID=comp115871_c0_seq1.mrna1;geneID=comp115871_c0_seq1.path1;Name=comp115871_c0_seq1;Dir=indeterminatecoverage=99.9;identity=91.2;matches=1048;mismatches=49;indels=52;unknowns=0;Target=comp115871_c0_seq1 887 798 .;locus=RLOC_00012349
Chr1	stalkie_big_nohaplotig	exon	148644079	148644837	89	-	.	Parent=comp115871_c0_seq1.mrna1;Target=comp115871_c0_seq1 1135 354 .
Chr1	stalkie_big_nohaplotig	exon	148644861	148645213	94	-	.	Parent=comp115871_c0_seq1.mrna1;Target=comp115871_c0_seq1 352 1 .
Chr1	stalkie_big_nohaplotig	CDS	148644341	148644430	.	-	0	Parent=comp115871_c0_seq1.mrna1
Chr1	gffcl	locus	148645965	148752635	.	+	.	ID=RLOC_00012350;geneIDs=comp151177_c0_seq1.path1;transcripts=comp151177_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148645965	148752635	.	+	.	ID=comp151177_c0_seq1.mrna1;geneID=comp151177_c0_seq1.path1;Name=comp151177_c0_seq1;Dir=antisensecoverage=67.8;identity=94.8;matches=493;mismatches=15;indels=12;unknowns=0;Target=comp151177_c0_seq1 409 651 .;locus=RLOC_00012350
Chr1	stalkie_big_nohaplotig	exon	148645965	148646349	99	+	.	Parent=comp151177_c0_seq1.mrna1;Target=comp151177_c0_seq1 379 763 -
Chr1	stalkie_big_nohaplotig	exon	148704119	148704136	100	+	.	Parent=comp151177_c0_seq1.mrna1;Target=comp151177_c0_seq1 361 378 -
Chr1	stalkie_big_nohaplotig	exon	148714649	148714652	100	+	.	Parent=comp151177_c0_seq1.mrna1;Target=comp151177_c0_seq1 357 360 -
Chr1	stalkie_big_nohaplotig	exon	148719000	148719007	100	+	.	Parent=comp151177_c0_seq1.mrna1;Target=comp151177_c0_seq1 349 356 -
Chr1	stalkie_big_nohaplotig	exon	148722633	148722647	80	+	.	Parent=comp151177_c0_seq1.mrna1;Target=comp151177_c0_seq1 335 348 -
Chr1	stalkie_big_nohaplotig	exon	148734258	148734267	90	+	.	Parent=comp151177_c0_seq1.mrna1;Target=comp151177_c0_seq1 325 334 -
Chr1	stalkie_big_nohaplotig	exon	148735215	148735253	70	+	.	Parent=comp151177_c0_seq1.mrna1;Target=comp151177_c0_seq1 275 324 -
Chr1	stalkie_big_nohaplotig	exon	148735785	148735787	100	+	.	Parent=comp151177_c0_seq1.mrna1;Target=comp151177_c0_seq1 272 274 -
Chr1	stalkie_big_nohaplotig	exon	148736954	148736959	66	+	.	Parent=comp151177_c0_seq1.mrna1;Target=comp151177_c0_seq1 266 271 -
Chr1	stalkie_big_nohaplotig	exon	148740854	148740859	83	+	.	Parent=comp151177_c0_seq1.mrna1;Target=comp151177_c0_seq1 260 265 -
Chr1	stalkie_big_nohaplotig	exon	148745187	148745195	77	+	.	Parent=comp151177_c0_seq1.mrna1;Target=comp151177_c0_seq1 251 259 -
Chr1	stalkie_big_nohaplotig	exon	148752630	148752635	100	+	.	Parent=comp151177_c0_seq1.mrna1;Target=comp151177_c0_seq1 245 250 -
Chr1	stalkie_big_nohaplotig	CDS	148646077	148646319	.	+	0	Parent=comp151177_c0_seq1.mrna1
Chr1	gffcl	locus	148651682	148651834	.	-	.	ID=RLOC_00012351;geneIDs=FBgn0263115.path1;transcripts=FBgn0263115.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148651682	148651834	.	-	.	ID=FBgn0263115.mrna1;geneID=FBgn0263115.path1;Name=FBgn0263115;Dir=indeterminatecoverage=16.0;identity=100.0;matches=153;mismatches=0;indels=0;unknowns=0;Target=FBgn0263115 153 1 .;locus=RLOC_00012351
Chr1	stalkie_big_nohaplotig	exon	148651682	148651834	100	-	.	Parent=FBgn0263115.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148651682	148651834	.	-	0	Parent=FBgn0263115.mrna1
Chr1	gffcl	locus	148692436	148693878	.	+	.	ID=RLOC_00012352;geneIDs=FBgn0260874.path1,Dv_FBgn0209033.path1;transcripts=Dv_FBgn0209033.mrna1,FBgn0260874.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148692436	148693878	.	+	.	ID=Dv_FBgn0209033.mrna1;geneID=Dv_FBgn0209033.path1;Name=Dv_FBgn0209033;Dir=sensecoverage=99.8;identity=100.0;matches=617;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012352
Chr1	stalkie_big_nohaplotig	exon	148692436	148692485	100	+	.	Parent=Dv_FBgn0209033.mrna1;Target=Dv_FBgn0209033 2 51 +
Chr1	stalkie_big_nohaplotig	exon	148692675	148692831	100	+	.	Parent=Dv_FBgn0209033.mrna1;Target=Dv_FBgn0209033 52 208 +
Chr1	stalkie_big_nohaplotig	exon	148693324	148693493	100	+	.	Parent=Dv_FBgn0209033.mrna1;Target=Dv_FBgn0209033 209 378 +
Chr1	stalkie_big_nohaplotig	exon	148693552	148693681	100	+	.	Parent=Dv_FBgn0209033.mrna1;Target=Dv_FBgn0209033 379 508 +
Chr1	stalkie_big_nohaplotig	exon	148693769	148693878	100	+	.	Parent=Dv_FBgn0209033.mrna1;Target=Dv_FBgn0209033 509 618 +
Chr1	stalkie_big_nohaplotig	CDS	148692438	148692485	.	+	0	Parent=Dv_FBgn0209033.mrna1;Target=Dv_FBgn0209033 4 51 +
Chr1	stalkie_big_nohaplotig	CDS	148692675	148692831	.	+	0	Parent=Dv_FBgn0209033.mrna1;Target=Dv_FBgn0209033 52 208 +
Chr1	stalkie_big_nohaplotig	CDS	148693324	148693493	.	+	2	Parent=Dv_FBgn0209033.mrna1;Target=Dv_FBgn0209033 209 378 +
Chr1	stalkie_big_nohaplotig	CDS	148693552	148693681	.	+	0	Parent=Dv_FBgn0209033.mrna1;Target=Dv_FBgn0209033 379 508 +
Chr1	stalkie_big_nohaplotig	CDS	148693769	148693878	.	+	2	Parent=Dv_FBgn0209033.mrna1;Target=Dv_FBgn0209033 509 618 +
Chr1	stalkie_big_nohaplotig	mRNA	148692436	148693878	.	+	.	ID=FBgn0260874.mrna1;geneID=FBgn0260874.path1;Name=FBgn0260874;Dir=sensecoverage=99.9;identity=100.0;matches=695;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012352
Chr1	stalkie_big_nohaplotig	exon	148692436	148692485	100	+	.	Parent=FBgn0260874.mrna1;Target=FBgn0260874 2 51 +
Chr1	stalkie_big_nohaplotig	exon	148692675	148692831	100	+	.	Parent=FBgn0260874.mrna1;Target=FBgn0260874 52 208 +
Chr1	stalkie_big_nohaplotig	exon	148693246	148693493	100	+	.	Parent=FBgn0260874.mrna1;Target=FBgn0260874 209 456 +
Chr1	stalkie_big_nohaplotig	exon	148693552	148693681	100	+	.	Parent=FBgn0260874.mrna1;Target=FBgn0260874 457 586 +
Chr1	stalkie_big_nohaplotig	exon	148693769	148693878	100	+	.	Parent=FBgn0260874.mrna1;Target=FBgn0260874 587 696 +
Chr1	stalkie_big_nohaplotig	CDS	148692438	148692485	.	+	0	Parent=FBgn0260874.mrna1;Target=FBgn0260874 4 51 +
Chr1	stalkie_big_nohaplotig	CDS	148692675	148692831	.	+	0	Parent=FBgn0260874.mrna1;Target=FBgn0260874 52 208 +
Chr1	stalkie_big_nohaplotig	CDS	148693246	148693493	.	+	2	Parent=FBgn0260874.mrna1;Target=FBgn0260874 209 456 +
Chr1	stalkie_big_nohaplotig	CDS	148693552	148693681	.	+	0	Parent=FBgn0260874.mrna1;Target=FBgn0260874 457 586 +
Chr1	stalkie_big_nohaplotig	CDS	148693769	148693878	.	+	2	Parent=FBgn0260874.mrna1;Target=FBgn0260874 587 696 +
Chr1	gffcl	locus	148766968	148767693	.	+	.	ID=RLOC_00012353;geneIDs=comp147840_c2_seq1.path1;transcripts=comp147840_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148766968	148767693	.	+	.	ID=comp147840_c2_seq1.mrna1;geneID=comp147840_c2_seq1.path1;Name=comp147840_c2_seq1;Dir=indeterminatecoverage=98.0;identity=99.9;matches=725;mismatches=1;indels=0;unknowns=0;Target=comp147840_c2_seq1 741 16 .;CDS_Target=comp147840_c2_seq1 241 155 .;locus=RLOC_00012353
Chr1	stalkie_big_nohaplotig	exon	148766968	148767693	99	+	.	Parent=comp147840_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148767107	148767193	.	+	0	Parent=comp147840_c2_seq1.mrna1
Chr1	gffcl	locus	148930923	148931518	.	-	.	ID=RLOC_00012354;geneIDs=comp156381_c0_seq1.path1;transcripts=comp156381_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148930923	148931518	.	-	.	ID=comp156381_c0_seq1.mrna1;geneID=comp156381_c0_seq1.path1;Name=comp156381_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.7;matches=594;mismatches=2;indels=0;unknowns=0;Target=comp156381_c0_seq1 596 1 .;CDS_Target=comp156381_c0_seq1 213 31 .;locus=RLOC_00012354
Chr1	stalkie_big_nohaplotig	exon	148930923	148931518	99	-	.	Parent=comp156381_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148931306	148931488	.	-	0	Parent=comp156381_c0_seq1.mrna1
Chr1	gffcl	locus	148933269	148933749	.	+	.	ID=RLOC_00012355;geneIDs=FBgn0000173.1.path1;transcripts=FBgn0000173.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148933269	148933749	.	+	.	ID=FBgn0000173.1.mrna1;geneID=FBgn0000173.1.path1;Name=FBgn0000173.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=481;mismatches=0;indels=2;unknowns=0;Target=FBgn0000173.1 483 1 .;CDS_Target=FBgn0000173.1 76 2 .;locus=RLOC_00012355
Chr1	stalkie_big_nohaplotig	exon	148933269	148933749	99	+	.	Parent=FBgn0000173.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	148933270	148933342	.	+	0	Parent=FBgn0000173.1.mrna1
Chr1	gffcl	locus	148939730	148941197	.	-	.	ID=RLOC_00012356;geneIDs=ORF2837.path1;transcripts=ORF2837.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	148939730	148941197	.	-	.	ID=ORF2837.mrna1;geneID=ORF2837.path1;Name=ORF2837;Dir=sensecoverage=100.0;identity=98.8;matches=790;mismatches=8;indels=2;unknowns=0;Target=ORF2837 3 29 +;locus=RLOC_00012356
Chr1	stalkie_big_nohaplotig	exon	148939730	148940046	99	-	.	Parent=ORF2837.mrna1;Target=ORF2837 482 798 +
Chr1	stalkie_big_nohaplotig	exon	148940234	148940524	98	-	.	Parent=ORF2837.mrna1;Target=ORF2837 191 481 +
Chr1	stalkie_big_nohaplotig	exon	148941006	148941197	97	-	.	Parent=ORF2837.mrna1;Target=ORF2837 1 190 +
Chr1	stalkie_big_nohaplotig	CDS	148941167	148941195	.	-	0	Parent=ORF2837.mrna1
Chr1	gffcl	locus	149130317	149130490	.	+	.	ID=RLOC_00012357;geneIDs=comp7588153_c0_seq1.path1;transcripts=comp7588153_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149130317	149130490	.	+	.	ID=comp7588153_c0_seq1.mrna1;geneID=comp7588153_c0_seq1.path1;Name=comp7588153_c0_seq1;Dir=indeterminatecoverage=85.7;identity=100.0;matches=174;mismatches=0;indels=0;unknowns=0;Target=comp7588153_c0_seq1 174 1 .;CDS_Target=comp7588153_c0_seq1 32 3 .;locus=RLOC_00012357
Chr1	stalkie_big_nohaplotig	exon	149130317	149130490	100	+	.	Parent=comp7588153_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	149130319	149130348	.	+	0	Parent=comp7588153_c0_seq1.mrna1
Chr1	gffcl	locus	149131520	149132002	.	-	.	ID=RLOC_00012358;geneIDs=comp144127_c0_seq1.path1;transcripts=comp144127_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149131520	149132002	.	-	.	ID=comp144127_c0_seq1.mrna1;geneID=comp144127_c0_seq1.path1;Name=comp144127_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=472;mismatches=6;indels=7;unknowns=0;Target=comp144127_c0_seq1 480 1 .;CDS_Target=comp144127_c0_seq1 181 122 .;locus=RLOC_00012358
Chr1	stalkie_big_nohaplotig	exon	149131520	149132002	97	-	.	Parent=comp144127_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	149131821	149131880	.	-	0	Parent=comp144127_c0_seq1.mrna1
Chr1	gffcl	locus	149133335	149136698	.	-	.	ID=RLOC_00012359;geneIDs=ORF2680.path1;transcripts=ORF2680.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149133335	149136698	.	-	.	ID=ORF2680.mrna1;geneID=ORF2680.path1;Name=ORF2680;Dir=sensecoverage=100.0;identity=99.9;matches=821;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012359
Chr1	stalkie_big_nohaplotig	exon	149133335	149133582	99	-	.	Parent=ORF2680.mrna1;Target=ORF2680 575 822 +
Chr1	stalkie_big_nohaplotig	exon	149133674	149133991	100	-	.	Parent=ORF2680.mrna1;Target=ORF2680 257 574 +
Chr1	stalkie_big_nohaplotig	exon	149136270	149136461	100	-	.	Parent=ORF2680.mrna1;Target=ORF2680 65 256 +
Chr1	stalkie_big_nohaplotig	exon	149136635	149136698	100	-	.	Parent=ORF2680.mrna1;Target=ORF2680 1 64 +
Chr1	stalkie_big_nohaplotig	CDS	149133335	149133582	.	-	2	Parent=ORF2680.mrna1;Target=ORF2680 575 822 +
Chr1	stalkie_big_nohaplotig	CDS	149133674	149133991	.	-	2	Parent=ORF2680.mrna1;Target=ORF2680 257 574 +
Chr1	stalkie_big_nohaplotig	CDS	149136270	149136461	.	-	2	Parent=ORF2680.mrna1;Target=ORF2680 65 256 +
Chr1	stalkie_big_nohaplotig	CDS	149136635	149136698	.	-	0	Parent=ORF2680.mrna1;Target=ORF2680 1 64 +
Chr1	gffcl	locus	149193156	149203632	.	-	.	ID=RLOC_00012360;geneIDs=comp161354_c0_seq1.path2;transcripts=comp161354_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	149193156	149203632	.	-	.	ID=comp161354_c0_seq1.mrna2;geneID=comp161354_c0_seq1.path2;Name=comp161354_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=364;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012360
Chr1	stalkie_big_nohaplotig	exon	149193156	149193201	100	-	.	Parent=comp161354_c0_seq1.mrna2;Target=comp161354_c0_seq1 1 46 -
Chr1	stalkie_big_nohaplotig	exon	149193302	149193371	100	-	.	Parent=comp161354_c0_seq1.mrna2;Target=comp161354_c0_seq1 47 116 -
Chr1	stalkie_big_nohaplotig	exon	149193434	149193565	100	-	.	Parent=comp161354_c0_seq1.mrna2;Target=comp161354_c0_seq1 117 248 -
Chr1	stalkie_big_nohaplotig	exon	149203455	149203508	100	-	.	Parent=comp161354_c0_seq1.mrna2;Target=comp161354_c0_seq1 249 302 -
Chr1	stalkie_big_nohaplotig	exon	149203567	149203632	93	-	.	Parent=comp161354_c0_seq1.mrna2;Target=comp161354_c0_seq1 303 368 -
Chr1	stalkie_big_nohaplotig	CDS	149193156	149193201	.	-	1	Parent=comp161354_c0_seq1.mrna2;Target=comp161354_c0_seq1 1 46 .
Chr1	stalkie_big_nohaplotig	CDS	149193302	149193371	.	-	2	Parent=comp161354_c0_seq1.mrna2;Target=comp161354_c0_seq1 47 116 .
Chr1	stalkie_big_nohaplotig	CDS	149193434	149193565	.	-	2	Parent=comp161354_c0_seq1.mrna2;Target=comp161354_c0_seq1 117 248 .
Chr1	stalkie_big_nohaplotig	CDS	149203455	149203508	.	-	2	Parent=comp161354_c0_seq1.mrna2;Target=comp161354_c0_seq1 249 302 .
Chr1	stalkie_big_nohaplotig	CDS	149203567	149203630	.	-	0	Parent=comp161354_c0_seq1.mrna2;Target=comp161354_c0_seq1 303 366 .
Chr1	gffcl	locus	149207320	149210407	.	-	.	ID=RLOC_00012361;geneIDs=ORF3032.path1;transcripts=ORF3032.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149207320	149210407	.	-	.	ID=ORF3032.mrna1;geneID=ORF3032.path1;Name=ORF3032;Dir=sensecoverage=100.0;identity=99.5;matches=773;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012361
Chr1	stalkie_big_nohaplotig	exon	149207320	149207591	99	-	.	Parent=ORF3032.mrna1;Target=ORF3032 506 777 +
Chr1	stalkie_big_nohaplotig	exon	149207666	149207986	100	-	.	Parent=ORF3032.mrna1;Target=ORF3032 185 505 +
Chr1	stalkie_big_nohaplotig	exon	149210224	149210407	98	-	.	Parent=ORF3032.mrna1;Target=ORF3032 1 184 +
Chr1	stalkie_big_nohaplotig	CDS	149207320	149207591	.	-	2	Parent=ORF3032.mrna1;Target=ORF3032 506 777 +
Chr1	stalkie_big_nohaplotig	CDS	149207666	149207986	.	-	2	Parent=ORF3032.mrna1;Target=ORF3032 185 505 +
Chr1	stalkie_big_nohaplotig	CDS	149210224	149210407	.	-	0	Parent=ORF3032.mrna1;Target=ORF3032 1 184 +
Chr1	gffcl	locus	149260802	149271124	.	+	.	ID=RLOC_00012362;geneIDs=comp142950_c0_seq1.path1;transcripts=comp142950_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149260802	149271124	.	+	.	ID=comp142950_c0_seq1.mrna1;geneID=comp142950_c0_seq1.path1;Name=comp142950_c0_seq1;Dir=sensecoverage=99.9;identity=99.7;matches=693;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012362
Chr1	stalkie_big_nohaplotig	exon	149260802	149260851	100	+	.	Parent=comp142950_c0_seq1.mrna1;Target=comp142950_c0_seq1 1 50 +
Chr1	stalkie_big_nohaplotig	exon	149270480	149271124	99	+	.	Parent=comp142950_c0_seq1.mrna1;Target=comp142950_c0_seq1 51 695 +
Chr1	stalkie_big_nohaplotig	CDS	149260849	149260851	.	+	0	Parent=comp142950_c0_seq1.mrna1;Target=comp142950_c0_seq1 48 50 +
Chr1	stalkie_big_nohaplotig	CDS	149270480	149271034	.	+	0	Parent=comp142950_c0_seq1.mrna1;Target=comp142950_c0_seq1 51 605 +
Chr1	gffcl	locus	149279686	149284020	.	+	.	ID=RLOC_00012363;geneIDs=ORF2831.path1;transcripts=ORF2831.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149279686	149284020	.	+	.	ID=ORF2831.mrna1;geneID=ORF2831.path1;Name=ORF2831;Dir=sensecoverage=100.0;identity=99.7;matches=796;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012363
Chr1	stalkie_big_nohaplotig	exon	149279686	149279775	100	+	.	Parent=ORF2831.mrna1;Target=ORF2831 1 90 +
Chr1	stalkie_big_nohaplotig	exon	149283313	149284020	99	+	.	Parent=ORF2831.mrna1;Target=ORF2831 91 798 +
Chr1	stalkie_big_nohaplotig	CDS	149279686	149279775	.	+	0	Parent=ORF2831.mrna1;Target=ORF2831 1 90 +
Chr1	stalkie_big_nohaplotig	CDS	149283313	149284020	.	+	0	Parent=ORF2831.mrna1;Target=ORF2831 91 798 +
Chr1	gffcl	locus	149288072	149288662	.	+	.	ID=RLOC_00012364;geneIDs=comp151745_c0_seq1.path1;transcripts=comp151745_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149288072	149288662	.	+	.	ID=comp151745_c0_seq1.mrna1;geneID=comp151745_c0_seq1.path1;Name=comp151745_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.6;matches=559;mismatches=2;indels=30;unknowns=0;Target=comp151745_c0_seq1 561 1 .;CDS_Target=comp151745_c0_seq1 412 2 .;locus=RLOC_00012364
Chr1	stalkie_big_nohaplotig	exon	149288072	149288662	94	+	.	Parent=comp151745_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	149288073	149288513	.	+	0	Parent=comp151745_c0_seq1.mrna1
Chr1	gffcl	locus	149298529	149298950	.	+	.	ID=RLOC_00012365;geneIDs=comp143145_c0_seq1.path1;transcripts=comp143145_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149298529	149298950	.	+	.	ID=comp143145_c0_seq1.mrna1;geneID=comp143145_c0_seq1.path1;Name=comp143145_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.1;matches=405;mismatches=13;indels=8;unknowns=0;Target=comp143145_c0_seq1 422 1 .;CDS_Target=comp143145_c0_seq1 250 101 .;locus=RLOC_00012365
Chr1	stalkie_big_nohaplotig	exon	149298529	149298950	95	+	.	Parent=comp143145_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	149298629	149298778	.	+	0	Parent=comp143145_c0_seq1.mrna1
Chr1	gffcl	locus	149306913	149307829	.	+	.	ID=RLOC_00012366;geneIDs=comp155423_c0_seq1.path1;transcripts=comp155423_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149306913	149307829	.	+	.	ID=comp155423_c0_seq1.mrna1;geneID=comp155423_c0_seq1.path1;Name=comp155423_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=849;mismatches=5;indels=0;unknowns=0;Target=comp155423_c0_seq1 79 2 .;locus=RLOC_00012366
Chr1	stalkie_big_nohaplotig	exon	149306913	149307664	99	+	.	Parent=comp155423_c0_seq1.mrna1;Target=comp155423_c0_seq1 752 1 .
Chr1	stalkie_big_nohaplotig	exon	149307728	149307829	99	+	.	Parent=comp155423_c0_seq1.mrna1;Target=comp155423_c0_seq1 854 753 .
Chr1	stalkie_big_nohaplotig	CDS	149306914	149306991	.	+	0	Parent=comp155423_c0_seq1.mrna1
Chr1	gffcl	locus	149320467	149320734	.	-	.	ID=RLOC_00012367;geneIDs=comp884314_c0_seq1.path1;transcripts=comp884314_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149320467	149320734	.	-	.	ID=comp884314_c0_seq1.mrna1;geneID=comp884314_c0_seq1.path1;Name=comp884314_c0_seq1;Dir=indeterminatecoverage=81.7;identity=98.9;matches=265;mismatches=3;indels=0;unknowns=0;Target=comp884314_c0_seq1 287 20 .;CDS_Target=comp884314_c0_seq1 212 96 .;locus=RLOC_00012367
Chr1	stalkie_big_nohaplotig	exon	149320467	149320734	98	-	.	Parent=comp884314_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	149320542	149320658	.	-	0	Parent=comp884314_c0_seq1.mrna1
Chr1	gffcl	locus	149321021	149328832	.	+	.	ID=RLOC_00012368;geneIDs=FBgn0004649.1.path1;transcripts=FBgn0004649.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149321021	149328832	.	+	.	ID=FBgn0004649.1.mrna1;geneID=FBgn0004649.1.path1;Name=FBgn0004649.1;Dir=sensecoverage=99.9;identity=99.2;matches=5519;mismatches=47;indels=0;unknowns=0;locus=RLOC_00012368
Chr1	stalkie_big_nohaplotig	exon	149321021	149321250	98	+	.	Parent=FBgn0004649.1.mrna1;Target=FBgn0004649.1 6 235 +
Chr1	stalkie_big_nohaplotig	exon	149321344	149321748	99	+	.	Parent=FBgn0004649.1.mrna1;Target=FBgn0004649.1 236 640 +
Chr1	stalkie_big_nohaplotig	exon	149321842	149322477	98	+	.	Parent=FBgn0004649.1.mrna1;Target=FBgn0004649.1 641 1276 +
Chr1	stalkie_big_nohaplotig	exon	149323731	149324633	99	+	.	Parent=FBgn0004649.1.mrna1;Target=FBgn0004649.1 1277 2179 +
Chr1	stalkie_big_nohaplotig	exon	149324693	149324837	97	+	.	Parent=FBgn0004649.1.mrna1;Target=FBgn0004649.1 2180 2324 +
Chr1	stalkie_big_nohaplotig	exon	149325274	149326073	99	+	.	Parent=FBgn0004649.1.mrna1;Target=FBgn0004649.1 2325 3124 +
Chr1	stalkie_big_nohaplotig	exon	149326177	149326440	100	+	.	Parent=FBgn0004649.1.mrna1;Target=FBgn0004649.1 3125 3388 +
Chr1	stalkie_big_nohaplotig	exon	149326508	149327539	98	+	.	Parent=FBgn0004649.1.mrna1;Target=FBgn0004649.1 3389 4420 +
Chr1	stalkie_big_nohaplotig	exon	149327601	149328622	98	+	.	Parent=FBgn0004649.1.mrna1;Target=FBgn0004649.1 4421 5442 +
Chr1	stalkie_big_nohaplotig	exon	149328704	149328832	100	+	.	Parent=FBgn0004649.1.mrna1;Target=FBgn0004649.1 5443 5571 +
Chr1	stalkie_big_nohaplotig	CDS	149321022	149321250	.	+	0	Parent=FBgn0004649.1.mrna1;Target=FBgn0004649.1 7 235 +
Chr1	stalkie_big_nohaplotig	CDS	149321344	149321748	.	+	2	Parent=FBgn0004649.1.mrna1;Target=FBgn0004649.1 236 640 +
Chr1	stalkie_big_nohaplotig	CDS	149321842	149322477	.	+	2	Parent=FBgn0004649.1.mrna1;Target=FBgn0004649.1 641 1276 +
Chr1	stalkie_big_nohaplotig	CDS	149323731	149324633	.	+	2	Parent=FBgn0004649.1.mrna1;Target=FBgn0004649.1 1277 2179 +
Chr1	stalkie_big_nohaplotig	CDS	149324693	149324837	.	+	2	Parent=FBgn0004649.1.mrna1;Target=FBgn0004649.1 2180 2324 +
Chr1	stalkie_big_nohaplotig	CDS	149325274	149326073	.	+	1	Parent=FBgn0004649.1.mrna1;Target=FBgn0004649.1 2325 3124 +
Chr1	stalkie_big_nohaplotig	CDS	149326177	149326440	.	+	2	Parent=FBgn0004649.1.mrna1;Target=FBgn0004649.1 3125 3388 +
Chr1	stalkie_big_nohaplotig	CDS	149326508	149327539	.	+	2	Parent=FBgn0004649.1.mrna1;Target=FBgn0004649.1 3389 4420 +
Chr1	stalkie_big_nohaplotig	CDS	149327601	149328622	.	+	2	Parent=FBgn0004649.1.mrna1;Target=FBgn0004649.1 4421 5442 +
Chr1	stalkie_big_nohaplotig	CDS	149328704	149328832	.	+	0	Parent=FBgn0004649.1.mrna1;Target=FBgn0004649.1 5443 5571 +
Chr1	gffcl	locus	149330653	149347847	.	-	.	ID=RLOC_00012369;geneIDs=FBgn0036381.1.path1;transcripts=FBgn0036381.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149330653	149347847	.	-	.	ID=FBgn0036381.1.mrna1;geneID=FBgn0036381.1.path1;Name=FBgn0036381.1;Dir=sensecoverage=100.0;identity=99.2;matches=1512;mismatches=12;indels=0;unknowns=0;locus=RLOC_00012369
Chr1	stalkie_big_nohaplotig	exon	149330653	149331664	99	-	.	Parent=FBgn0036381.1.mrna1;Target=FBgn0036381.1 513 1524 +
Chr1	stalkie_big_nohaplotig	exon	149331743	149331977	98	-	.	Parent=FBgn0036381.1.mrna1;Target=FBgn0036381.1 278 512 +
Chr1	stalkie_big_nohaplotig	exon	149343467	149343585	100	-	.	Parent=FBgn0036381.1.mrna1;Target=FBgn0036381.1 159 277 +
Chr1	stalkie_big_nohaplotig	exon	149347690	149347847	100	-	.	Parent=FBgn0036381.1.mrna1;Target=FBgn0036381.1 1 158 +
Chr1	stalkie_big_nohaplotig	CDS	149330653	149331664	.	-	1	Parent=FBgn0036381.1.mrna1;Target=FBgn0036381.1 513 1524 +
Chr1	stalkie_big_nohaplotig	CDS	149331743	149331977	.	-	2	Parent=FBgn0036381.1.mrna1;Target=FBgn0036381.1 278 512 +
Chr1	stalkie_big_nohaplotig	CDS	149343467	149343585	.	-	1	Parent=FBgn0036381.1.mrna1;Target=FBgn0036381.1 159 277 +
Chr1	stalkie_big_nohaplotig	CDS	149347690	149347847	.	-	0	Parent=FBgn0036381.1.mrna1;Target=FBgn0036381.1 1 158 +
Chr1	gffcl	locus	149352057	149352345	.	+	.	ID=RLOC_00012370;geneIDs=comp145606_c0_seq1.path1;transcripts=comp145606_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149352057	149352345	.	+	.	ID=comp145606_c0_seq1.mrna1;geneID=comp145606_c0_seq1.path1;Name=comp145606_c0_seq1;Dir=indeterminatecoverage=98.6;identity=98.6;matches=285;mismatches=4;indels=0;unknowns=0;Target=comp145606_c0_seq1 293 5 .;CDS_Target=comp145606_c0_seq1 176 75 .;locus=RLOC_00012370
Chr1	stalkie_big_nohaplotig	exon	149352057	149352345	98	+	.	Parent=comp145606_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	149352127	149352228	.	+	0	Parent=comp145606_c0_seq1.mrna1
Chr1	gffcl	locus	149352355	149352625	.	+	.	ID=RLOC_00012371;geneIDs=comp140811_c0_seq1.path1;transcripts=comp140811_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149352355	149352625	.	+	.	ID=comp140811_c0_seq1.mrna1;geneID=comp140811_c0_seq1.path1;Name=comp140811_c0_seq1;Dir=indeterminatecoverage=99.3;identity=98.5;matches=267;mismatches=4;indels=0;unknowns=0;Target=comp140811_c0_seq1 271 1 .;CDS_Target=comp140811_c0_seq1 155 3 .;locus=RLOC_00012371
Chr1	stalkie_big_nohaplotig	exon	149352355	149352625	98	+	.	Parent=comp140811_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	149352357	149352509	.	+	0	Parent=comp140811_c0_seq1.mrna1
Chr1	gffcl	locus	149352880	149353865	.	-	.	ID=RLOC_00012372;geneIDs=comp159166_c1_seq1.path1;transcripts=comp159166_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149352880	149353865	.	-	.	ID=comp159166_c1_seq1.mrna1;geneID=comp159166_c1_seq1.path1;Name=comp159166_c1_seq1;Dir=indeterminatecoverage=99.9;identity=86.0;matches=922;mismatches=21;indels=129;unknowns=0;Target=comp159166_c1_seq1 1029 1 .;CDS_Target=comp159166_c1_seq1 763 668 .;locus=RLOC_00012372
Chr1	stalkie_big_nohaplotig	exon	149352880	149353865	86	-	.	Parent=comp159166_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	149353137	149353232	.	-	0	Parent=comp159166_c1_seq1.mrna1
Chr1	gffcl	locus	149386271	149387775	.	+	.	ID=RLOC_00012374;geneIDs=FBgn0004403.1.path1;transcripts=FBgn0004403.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149386271	149387775	.	+	.	ID=FBgn0004403.1.mrna1;geneID=FBgn0004403.1.path1;Name=FBgn0004403.1;Dir=sensecoverage=100.0;identity=100.0;matches=456;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012374
Chr1	stalkie_big_nohaplotig	exon	149386271	149386510	100	+	.	Parent=FBgn0004403.1.mrna1;Target=FBgn0004403.1 1 240 +
Chr1	stalkie_big_nohaplotig	exon	149387560	149387775	100	+	.	Parent=FBgn0004403.1.mrna1;Target=FBgn0004403.1 241 456 +
Chr1	stalkie_big_nohaplotig	CDS	149386271	149386510	.	+	0	Parent=FBgn0004403.1.mrna1;Target=FBgn0004403.1 1 240 +
Chr1	stalkie_big_nohaplotig	CDS	149387560	149387775	.	+	0	Parent=FBgn0004403.1.mrna1;Target=FBgn0004403.1 241 456 +
Chr1	gffcl	locus	149407241	149409914	.	+	.	ID=RLOC_00012375;geneIDs=comp117070_c0_seq1.path1;transcripts=comp117070_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149407241	149409914	.	+	.	ID=comp117070_c0_seq1.mrna1;geneID=comp117070_c0_seq1.path1;Name=comp117070_c0_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=227;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012375
Chr1	stalkie_big_nohaplotig	exon	149407241	149407388	99	+	.	Parent=comp117070_c0_seq1.mrna1;Target=comp117070_c0_seq1 82 229 -
Chr1	stalkie_big_nohaplotig	exon	149409834	149409914	98	+	.	Parent=comp117070_c0_seq1.mrna1;Target=comp117070_c0_seq1 1 81 -
Chr1	stalkie_big_nohaplotig	CDS	149407274	149407388	.	+	0	Parent=comp117070_c0_seq1.mrna1;Target=comp117070_c0_seq1 82 196 .
Chr1	stalkie_big_nohaplotig	CDS	149409834	149409913	.	+	2	Parent=comp117070_c0_seq1.mrna1;Target=comp117070_c0_seq1 2 81 .
Chr1	gffcl	locus	149410463	149411072	.	+	.	ID=RLOC_00012376;geneIDs=comp153373_c0_seq1.path1;transcripts=comp153373_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149410463	149411072	.	+	.	ID=comp153373_c0_seq1.mrna1;geneID=comp153373_c0_seq1.path1;Name=comp153373_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.2;matches=605;mismatches=5;indels=0;unknowns=0;Target=comp153373_c0_seq1 610 1 .;CDS_Target=comp153373_c0_seq1 456 1 .;locus=RLOC_00012376
Chr1	stalkie_big_nohaplotig	exon	149410463	149411072	99	+	.	Parent=comp153373_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	149410463	149410918	.	+	0	Parent=comp153373_c0_seq1.mrna1
Chr1	gffcl	locus	149418086	149419708	.	-	.	ID=RLOC_00012377;geneIDs=FBgn0029118.1.path1;transcripts=FBgn0029118.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149418086	149419708	.	-	.	ID=FBgn0029118.1.mrna1;geneID=FBgn0029118.1.path1;Name=FBgn0029118.1;Dir=sensecoverage=100.0;identity=99.1;matches=1332;mismatches=12;indels=0;unknowns=0;locus=RLOC_00012377
Chr1	stalkie_big_nohaplotig	exon	149418086	149419052	98	-	.	Parent=FBgn0029118.1.mrna1;Target=FBgn0029118.1 378 1344 +
Chr1	stalkie_big_nohaplotig	exon	149419123	149419222	100	-	.	Parent=FBgn0029118.1.mrna1;Target=FBgn0029118.1 278 377 +
Chr1	stalkie_big_nohaplotig	exon	149419289	149419430	98	-	.	Parent=FBgn0029118.1.mrna1;Target=FBgn0029118.1 136 277 +
Chr1	stalkie_big_nohaplotig	exon	149419510	149419572	100	-	.	Parent=FBgn0029118.1.mrna1;Target=FBgn0029118.1 73 135 +
Chr1	stalkie_big_nohaplotig	exon	149419637	149419708	100	-	.	Parent=FBgn0029118.1.mrna1;Target=FBgn0029118.1 1 72 +
Chr1	stalkie_big_nohaplotig	CDS	149418086	149419052	.	-	1	Parent=FBgn0029118.1.mrna1;Target=FBgn0029118.1 378 1344 +
Chr1	stalkie_big_nohaplotig	CDS	149419123	149419222	.	-	2	Parent=FBgn0029118.1.mrna1;Target=FBgn0029118.1 278 377 +
Chr1	stalkie_big_nohaplotig	CDS	149419289	149419430	.	-	0	Parent=FBgn0029118.1.mrna1;Target=FBgn0029118.1 136 277 +
Chr1	stalkie_big_nohaplotig	CDS	149419510	149419572	.	-	0	Parent=FBgn0029118.1.mrna1;Target=FBgn0029118.1 73 135 +
Chr1	stalkie_big_nohaplotig	CDS	149419637	149419708	.	-	0	Parent=FBgn0029118.1.mrna1;Target=FBgn0029118.1 1 72 +
Chr1	gffcl	locus	149421129	149422186	.	+	.	ID=RLOC_00012378;geneIDs=FBgn0029121.1.path1;transcripts=FBgn0029121.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149421129	149422186	.	+	.	ID=FBgn0029121.1.mrna1;geneID=FBgn0029121.1.path1;Name=FBgn0029121.1;Dir=sensecoverage=100.0;identity=99.7;matches=927;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012378
Chr1	stalkie_big_nohaplotig	exon	149421129	149421549	99	+	.	Parent=FBgn0029121.1.mrna1;Target=FBgn0029121.1 1 421 +
Chr1	stalkie_big_nohaplotig	exon	149421603	149421839	100	+	.	Parent=FBgn0029121.1.mrna1;Target=FBgn0029121.1 422 658 +
Chr1	stalkie_big_nohaplotig	exon	149421915	149422186	99	+	.	Parent=FBgn0029121.1.mrna1;Target=FBgn0029121.1 659 930 +
Chr1	stalkie_big_nohaplotig	CDS	149421129	149421549	.	+	0	Parent=FBgn0029121.1.mrna1;Target=FBgn0029121.1 1 421 +
Chr1	stalkie_big_nohaplotig	CDS	149421603	149421839	.	+	2	Parent=FBgn0029121.1.mrna1;Target=FBgn0029121.1 422 658 +
Chr1	stalkie_big_nohaplotig	CDS	149421915	149422186	.	+	2	Parent=FBgn0029121.1.mrna1;Target=FBgn0029121.1 659 930 +
Chr1	gffcl	locus	149423083	149423897	.	-	.	ID=RLOC_00012379;geneIDs=FBgn0032509.1.path1;transcripts=FBgn0032509.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149423083	149423897	.	-	.	ID=FBgn0032509.1.mrna1;geneID=FBgn0032509.1.path1;Name=FBgn0032509.1;Dir=sensecoverage=100.0;identity=99.7;matches=643;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012379
Chr1	stalkie_big_nohaplotig	exon	149423083	149423257	99	-	.	Parent=FBgn0032509.1.mrna1;Target=FBgn0032509.1 471 645 +
Chr1	stalkie_big_nohaplotig	exon	149423320	149423576	100	-	.	Parent=FBgn0032509.1.mrna1;Target=FBgn0032509.1 214 470 +
Chr1	stalkie_big_nohaplotig	exon	149423634	149423790	99	-	.	Parent=FBgn0032509.1.mrna1;Target=FBgn0032509.1 57 213 +
Chr1	stalkie_big_nohaplotig	exon	149423842	149423897	100	-	.	Parent=FBgn0032509.1.mrna1;Target=FBgn0032509.1 1 56 +
Chr1	stalkie_big_nohaplotig	CDS	149423083	149423257	.	-	1	Parent=FBgn0032509.1.mrna1;Target=FBgn0032509.1 471 645 +
Chr1	stalkie_big_nohaplotig	CDS	149423320	149423576	.	-	0	Parent=FBgn0032509.1.mrna1;Target=FBgn0032509.1 214 470 +
Chr1	stalkie_big_nohaplotig	CDS	149423634	149423790	.	-	1	Parent=FBgn0032509.1.mrna1;Target=FBgn0032509.1 57 213 +
Chr1	stalkie_big_nohaplotig	CDS	149423842	149423897	.	-	0	Parent=FBgn0032509.1.mrna1;Target=FBgn0032509.1 1 56 +
Chr1	gffcl	locus	149430344	149431596	.	-	.	ID=RLOC_00012381;geneIDs=ORF2448.path1;transcripts=ORF2448.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149430344	149431596	.	-	.	ID=ORF2448.mrna1;geneID=ORF2448.path1;Name=ORF2448;Dir=sensecoverage=100.0;identity=97.5;matches=842;mismatches=10;indels=12;unknowns=0;locus=RLOC_00012381
Chr1	stalkie_big_nohaplotig	exon	149430344	149430583	97	-	.	Parent=ORF2448.mrna1;Target=ORF2448 619 858 +
Chr1	stalkie_big_nohaplotig	exon	149430807	149431164	99	-	.	Parent=ORF2448.mrna1;Target=ORF2448 261 618 +
Chr1	stalkie_big_nohaplotig	exon	149431229	149431416	92	-	.	Parent=ORF2448.mrna1;Target=ORF2448 73 260 +
Chr1	stalkie_big_nohaplotig	exon	149431525	149431596	100	-	.	Parent=ORF2448.mrna1;Target=ORF2448 1 72 +
Chr1	stalkie_big_nohaplotig	CDS	149430344	149430583	.	-	0	Parent=ORF2448.mrna1;Target=ORF2448 619 858 +
Chr1	stalkie_big_nohaplotig	CDS	149430807	149431164	.	-	1	Parent=ORF2448.mrna1;Target=ORF2448 261 618 +
Chr1	stalkie_big_nohaplotig	CDS	149431229	149431416	.	-	0	Parent=ORF2448.mrna1;Target=ORF2448 73 260 +
Chr1	stalkie_big_nohaplotig	CDS	149431525	149431596	.	-	0	Parent=ORF2448.mrna1;Target=ORF2448 1 72 +
Chr1	gffcl	locus	149445235	149446554	.	+	.	ID=RLOC_00012384;geneIDs=FBgn0036834.1.path2;transcripts=FBgn0036834.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	149445235	149446554	.	+	.	ID=FBgn0036834.1.mrna2;geneID=FBgn0036834.1.path2;Name=FBgn0036834.1;Dir=sensecoverage=100.0;identity=99.8;matches=958;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012384
Chr1	stalkie_big_nohaplotig	exon	149445235	149445355	100	+	.	Parent=FBgn0036834.1.mrna2;Target=FBgn0036834.1 1 121 +
Chr1	stalkie_big_nohaplotig	exon	149445446	149445927	99	+	.	Parent=FBgn0036834.1.mrna2;Target=FBgn0036834.1 122 603 +
Chr1	stalkie_big_nohaplotig	exon	149446028	149446153	100	+	.	Parent=FBgn0036834.1.mrna2;Target=FBgn0036834.1 604 729 +
Chr1	stalkie_big_nohaplotig	exon	149446262	149446388	100	+	.	Parent=FBgn0036834.1.mrna2;Target=FBgn0036834.1 730 856 +
Chr1	stalkie_big_nohaplotig	exon	149446451	149446554	100	+	.	Parent=FBgn0036834.1.mrna2;Target=FBgn0036834.1 857 960 +
Chr1	stalkie_big_nohaplotig	CDS	149445235	149445355	.	+	0	Parent=FBgn0036834.1.mrna2;Target=FBgn0036834.1 1 121 +
Chr1	stalkie_big_nohaplotig	CDS	149445446	149445927	.	+	2	Parent=FBgn0036834.1.mrna2;Target=FBgn0036834.1 122 603 +
Chr1	stalkie_big_nohaplotig	CDS	149446028	149446153	.	+	0	Parent=FBgn0036834.1.mrna2;Target=FBgn0036834.1 604 729 +
Chr1	stalkie_big_nohaplotig	CDS	149446262	149446388	.	+	0	Parent=FBgn0036834.1.mrna2;Target=FBgn0036834.1 730 856 +
Chr1	stalkie_big_nohaplotig	CDS	149446451	149446554	.	+	2	Parent=FBgn0036834.1.mrna2;Target=FBgn0036834.1 857 960 +
Chr1	gffcl	locus	149540138	149540642	.	+	.	ID=RLOC_00012386;geneIDs=comp152242_c0_seq1.path1;transcripts=comp152242_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149540138	149540642	.	+	.	ID=comp152242_c0_seq1.mrna1;geneID=comp152242_c0_seq1.path1;Name=comp152242_c0_seq1;Dir=antisensecoverage=88.4;identity=99.3;matches=437;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012386
Chr1	stalkie_big_nohaplotig	exon	149540138	149540413	99	+	.	Parent=comp152242_c0_seq1.mrna1;Target=comp152242_c0_seq1 223 498 -
Chr1	stalkie_big_nohaplotig	exon	149540479	149540642	99	+	.	Parent=comp152242_c0_seq1.mrna1;Target=comp152242_c0_seq1 59 222 -
Chr1	stalkie_big_nohaplotig	CDS	149540285	149540413	.	+	0	Parent=comp152242_c0_seq1.mrna1;Target=comp152242_c0_seq1 223 351 .
Chr1	stalkie_big_nohaplotig	CDS	149540479	149540580	.	+	0	Parent=comp152242_c0_seq1.mrna1;Target=comp152242_c0_seq1 121 222 .
Chr1	gffcl	locus	149554080	149554686	.	+	.	ID=RLOC_00012387;geneIDs=comp153224_c0_seq1.path1;transcripts=comp153224_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149554080	149554686	.	+	.	ID=comp153224_c0_seq1.mrna1;geneID=comp153224_c0_seq1.path1;Name=comp153224_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.7;matches=589;mismatches=18;indels=15;unknowns=0;Target=comp153224_c0_seq1 622 1 .;CDS_Target=comp153224_c0_seq1 520 422 .;locus=RLOC_00012387
Chr1	stalkie_big_nohaplotig	exon	149554080	149554686	94	+	.	Parent=comp153224_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	149554486	149554584	.	+	0	Parent=comp153224_c0_seq1.mrna1
Chr1	gffcl	locus	149555271	149555773	.	+	.	ID=RLOC_00012388;geneIDs=comp152904_c1_seq1.path1;transcripts=comp152904_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149555271	149555773	.	+	.	ID=comp152904_c1_seq1.mrna1;geneID=comp152904_c1_seq1.path1;Name=comp152904_c1_seq1;Dir=indeterminatecoverage=89.3;identity=96.9;matches=499;mismatches=4;indels=12;unknowns=0;Target=comp152904_c1_seq1 515 1 .;CDS_Target=comp152904_c1_seq1 19 2 .;locus=RLOC_00012388
Chr1	stalkie_big_nohaplotig	exon	149555271	149555773	96	+	.	Parent=comp152904_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	149555272	149555289	.	+	0	Parent=comp152904_c1_seq1.mrna1
Chr1	gffcl	locus	149555834	149559838	.	-	.	ID=RLOC_00012389;geneIDs=FBgn0026313.1.path1;transcripts=FBgn0026313.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149555834	149559838	.	-	.	ID=FBgn0026313.1.mrna1;geneID=FBgn0026313.1.path1;Name=FBgn0026313.1;Dir=sensecoverage=100.0;identity=99.7;matches=2172;mismatches=6;indels=0;unknowns=0;locus=RLOC_00012389
Chr1	stalkie_big_nohaplotig	exon	149555834	149555902	100	-	.	Parent=FBgn0026313.1.mrna1;Target=FBgn0026313.1 2110 2178 +
Chr1	stalkie_big_nohaplotig	exon	149555967	149556107	100	-	.	Parent=FBgn0026313.1.mrna1;Target=FBgn0026313.1 1969 2109 +
Chr1	stalkie_big_nohaplotig	exon	149556537	149557391	99	-	.	Parent=FBgn0026313.1.mrna1;Target=FBgn0026313.1 1114 1968 +
Chr1	stalkie_big_nohaplotig	exon	149557678	149557817	96	-	.	Parent=FBgn0026313.1.mrna1;Target=FBgn0026313.1 974 1113 +
Chr1	stalkie_big_nohaplotig	exon	149558236	149558548	100	-	.	Parent=FBgn0026313.1.mrna1;Target=FBgn0026313.1 661 973 +
Chr1	stalkie_big_nohaplotig	exon	149559105	149559463	100	-	.	Parent=FBgn0026313.1.mrna1;Target=FBgn0026313.1 302 660 +
Chr1	stalkie_big_nohaplotig	exon	149559538	149559838	100	-	.	Parent=FBgn0026313.1.mrna1;Target=FBgn0026313.1 1 301 +
Chr1	stalkie_big_nohaplotig	CDS	149555834	149555902	.	-	0	Parent=FBgn0026313.1.mrna1;Target=FBgn0026313.1 2110 2178 +
Chr1	stalkie_big_nohaplotig	CDS	149555967	149556107	.	-	0	Parent=FBgn0026313.1.mrna1;Target=FBgn0026313.1 1969 2109 +
Chr1	stalkie_big_nohaplotig	CDS	149556537	149557391	.	-	0	Parent=FBgn0026313.1.mrna1;Target=FBgn0026313.1 1114 1968 +
Chr1	stalkie_big_nohaplotig	CDS	149557678	149557817	.	-	2	Parent=FBgn0026313.1.mrna1;Target=FBgn0026313.1 974 1113 +
Chr1	stalkie_big_nohaplotig	CDS	149558236	149558548	.	-	0	Parent=FBgn0026313.1.mrna1;Target=FBgn0026313.1 661 973 +
Chr1	stalkie_big_nohaplotig	CDS	149559105	149559463	.	-	2	Parent=FBgn0026313.1.mrna1;Target=FBgn0026313.1 302 660 +
Chr1	stalkie_big_nohaplotig	CDS	149559538	149559838	.	-	0	Parent=FBgn0026313.1.mrna1;Target=FBgn0026313.1 1 301 +
Chr1	gffcl	locus	149561876	149562594	.	-	.	ID=RLOC_00012390;geneIDs=comp139813_c0_seq1.path1;transcripts=comp139813_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149561876	149562594	.	-	.	ID=comp139813_c0_seq1.mrna1;geneID=comp139813_c0_seq1.path1;Name=comp139813_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=642;mismatches=4;indels=0;unknowns=0;Target=comp139813_c0_seq1 174 317 .;locus=RLOC_00012390
Chr1	stalkie_big_nohaplotig	exon	149561876	149561899	100	-	.	Parent=comp139813_c0_seq1.mrna1;Target=comp139813_c0_seq1 1 24 -
Chr1	stalkie_big_nohaplotig	exon	149561973	149562594	99	-	.	Parent=comp139813_c0_seq1.mrna1;Target=comp139813_c0_seq1 25 646 -
Chr1	stalkie_big_nohaplotig	CDS	149562122	149562265	.	-	0	Parent=comp139813_c0_seq1.mrna1
Chr1	gffcl	locus	149565336	149566107	.	-	.	ID=RLOC_00012391;geneIDs=comp146766_c0_seq1.path1;transcripts=comp146766_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149565336	149566107	.	-	.	ID=comp146766_c0_seq1.mrna1;geneID=comp146766_c0_seq1.path1;Name=comp146766_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=769;mismatches=2;indels=5;unknowns=0;Target=comp146766_c0_seq1 775 1 .;CDS_Target=comp146766_c0_seq1 211 89 .;locus=RLOC_00012391
Chr1	stalkie_big_nohaplotig	exon	149565336	149566107	99	-	.	Parent=comp146766_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	149565897	149566019	.	-	0	Parent=comp146766_c0_seq1.mrna1
Chr1	gffcl	locus	149602938	149603726	.	-	.	ID=RLOC_00012392;geneIDs=FBgn0020238.7.path1;transcripts=FBgn0020238.7.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149602938	149603726	.	-	.	ID=FBgn0020238.7.mrna1;geneID=FBgn0020238.7.path1;Name=FBgn0020238.7;Dir=indeterminatecoverage=100.0;identity=98.4;matches=776;mismatches=13;indels=0;unknowns=0;Target=FBgn0020238.7 789 1 .;locus=RLOC_00012392
Chr1	stalkie_big_nohaplotig	exon	149602938	149603726	98	-	.	Parent=FBgn0020238.7.mrna1
Chr1	stalkie_big_nohaplotig	CDS	149602938	149603726	.	-	0	Parent=FBgn0020238.7.mrna1
Chr1	gffcl	locus	149611875	149612654	.	-	.	ID=RLOC_00012393;geneIDs=FBgn0020238.6.path1;transcripts=FBgn0020238.6.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149611875	149612654	.	-	.	ID=FBgn0020238.6.mrna1;geneID=FBgn0020238.6.path1;Name=FBgn0020238.6;Dir=indeterminatecoverage=100.0;identity=100.0;matches=780;mismatches=0;indels=0;unknowns=0;Target=FBgn0020238.6 780 1 .;locus=RLOC_00012393
Chr1	stalkie_big_nohaplotig	exon	149611875	149612654	100	-	.	Parent=FBgn0020238.6.mrna1
Chr1	stalkie_big_nohaplotig	CDS	149611875	149612654	.	-	0	Parent=FBgn0020238.6.mrna1
Chr1	gffcl	locus	149623461	149624216	.	-	.	ID=RLOC_00012394;geneIDs=FBgn0004907.3.path1;transcripts=FBgn0004907.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149623461	149624216	.	-	.	ID=FBgn0004907.3.mrna1;geneID=FBgn0004907.3.path1;Name=FBgn0004907.3;Dir=indeterminatecoverage=100.0;identity=98.9;matches=748;mismatches=8;indels=0;unknowns=0;Target=FBgn0004907.3 756 1 .;locus=RLOC_00012394
Chr1	stalkie_big_nohaplotig	exon	149623461	149624216	98	-	.	Parent=FBgn0004907.3.mrna1
Chr1	stalkie_big_nohaplotig	CDS	149623461	149624216	.	-	0	Parent=FBgn0004907.3.mrna1
Chr1	gffcl	locus	149634511	149634835	.	+	.	ID=RLOC_00012396;geneIDs=comp145448_c0_seq1.path1;transcripts=comp145448_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149634511	149634835	.	+	.	ID=comp145448_c0_seq1.mrna1;geneID=comp145448_c0_seq1.path1;Name=comp145448_c0_seq1;Dir=indeterminatecoverage=90.2;identity=99.4;matches=323;mismatches=0;indels=2;unknowns=0;Target=comp145448_c0_seq1 358 36 .;CDS_Target=comp145448_c0_seq1 156 37 .;locus=RLOC_00012396
Chr1	stalkie_big_nohaplotig	exon	149634511	149634835	99	+	.	Parent=comp145448_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	149634512	149634631	.	+	0	Parent=comp145448_c0_seq1.mrna1
Chr1	gffcl	locus	149635471	149635759	.	-	.	ID=RLOC_00012397;geneIDs=comp140390_c0_seq1.path1;transcripts=comp140390_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149635471	149635759	.	-	.	ID=comp140390_c0_seq1.mrna1;geneID=comp140390_c0_seq1.path1;Name=comp140390_c0_seq1;Dir=indeterminatecoverage=74.5;identity=99.3;matches=287;mismatches=2;indels=0;unknowns=0;Target=comp140390_c0_seq1 388 100 .;CDS_Target=comp140390_c0_seq1 132 100 .;locus=RLOC_00012397
Chr1	stalkie_big_nohaplotig	exon	149635471	149635759	99	-	.	Parent=comp140390_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	149635727	149635759	.	-	0	Parent=comp140390_c0_seq1.mrna1
Chr1	gffcl	locus	149636288	149648406	.	-	.	ID=RLOC_00012398;geneIDs=FBgn0028343.1.path1;transcripts=FBgn0028343.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149636288	149648406	.	-	.	ID=FBgn0028343.1.mrna1;geneID=FBgn0028343.1.path1;Name=FBgn0028343.1;Dir=sensecoverage=100.0;identity=99.5;matches=3198;mismatches=15;indels=0;unknowns=0;locus=RLOC_00012398
Chr1	stalkie_big_nohaplotig	exon	149636288	149636654	100	-	.	Parent=FBgn0028343.1.mrna1;Target=FBgn0028343.1 2847 3213 +
Chr1	stalkie_big_nohaplotig	exon	149636722	149636853	100	-	.	Parent=FBgn0028343.1.mrna1;Target=FBgn0028343.1 2715 2846 +
Chr1	stalkie_big_nohaplotig	exon	149637616	149637734	100	-	.	Parent=FBgn0028343.1.mrna1;Target=FBgn0028343.1 2596 2714 +
Chr1	stalkie_big_nohaplotig	exon	149637807	149638090	99	-	.	Parent=FBgn0028343.1.mrna1;Target=FBgn0028343.1 2312 2595 +
Chr1	stalkie_big_nohaplotig	exon	149638158	149638257	99	-	.	Parent=FBgn0028343.1.mrna1;Target=FBgn0028343.1 2212 2311 +
Chr1	stalkie_big_nohaplotig	exon	149638326	149639510	99	-	.	Parent=FBgn0028343.1.mrna1;Target=FBgn0028343.1 1027 2211 +
Chr1	stalkie_big_nohaplotig	exon	149639581	149639658	98	-	.	Parent=FBgn0028343.1.mrna1;Target=FBgn0028343.1 949 1026 +
Chr1	stalkie_big_nohaplotig	exon	149640314	149640466	98	-	.	Parent=FBgn0028343.1.mrna1;Target=FBgn0028343.1 796 948 +
Chr1	stalkie_big_nohaplotig	exon	149640529	149641007	99	-	.	Parent=FBgn0028343.1.mrna1;Target=FBgn0028343.1 317 795 +
Chr1	stalkie_big_nohaplotig	exon	149641066	149641224	99	-	.	Parent=FBgn0028343.1.mrna1;Target=FBgn0028343.1 158 316 +
Chr1	stalkie_big_nohaplotig	exon	149648250	149648406	100	-	.	Parent=FBgn0028343.1.mrna1;Target=FBgn0028343.1 1 157 +
Chr1	stalkie_big_nohaplotig	CDS	149636288	149636654	.	-	1	Parent=FBgn0028343.1.mrna1;Target=FBgn0028343.1 2847 3213 +
Chr1	stalkie_big_nohaplotig	CDS	149636722	149636853	.	-	1	Parent=FBgn0028343.1.mrna1;Target=FBgn0028343.1 2715 2846 +
Chr1	stalkie_big_nohaplotig	CDS	149637616	149637734	.	-	0	Parent=FBgn0028343.1.mrna1;Target=FBgn0028343.1 2596 2714 +
Chr1	stalkie_big_nohaplotig	CDS	149637807	149638090	.	-	2	Parent=FBgn0028343.1.mrna1;Target=FBgn0028343.1 2312 2595 +
Chr1	stalkie_big_nohaplotig	CDS	149638158	149638257	.	-	0	Parent=FBgn0028343.1.mrna1;Target=FBgn0028343.1 2212 2311 +
Chr1	stalkie_big_nohaplotig	CDS	149638326	149639510	.	-	0	Parent=FBgn0028343.1.mrna1;Target=FBgn0028343.1 1027 2211 +
Chr1	stalkie_big_nohaplotig	CDS	149639581	149639658	.	-	0	Parent=FBgn0028343.1.mrna1;Target=FBgn0028343.1 949 1026 +
Chr1	stalkie_big_nohaplotig	CDS	149640314	149640466	.	-	0	Parent=FBgn0028343.1.mrna1;Target=FBgn0028343.1 796 948 +
Chr1	stalkie_big_nohaplotig	CDS	149640529	149641007	.	-	2	Parent=FBgn0028343.1.mrna1;Target=FBgn0028343.1 317 795 +
Chr1	stalkie_big_nohaplotig	CDS	149641066	149641224	.	-	2	Parent=FBgn0028343.1.mrna1;Target=FBgn0028343.1 158 316 +
Chr1	stalkie_big_nohaplotig	CDS	149648250	149648406	.	-	0	Parent=FBgn0028343.1.mrna1;Target=FBgn0028343.1 1 157 +
Chr1	gffcl	locus	149649805	149651125	.	-	.	ID=RLOC_00012399;geneIDs=comp155994_c0_seq1.path1;transcripts=comp155994_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149649805	149651125	.	-	.	ID=comp155994_c0_seq1.mrna1;geneID=comp155994_c0_seq1.path1;Name=comp155994_c0_seq1;Dir=antisensecoverage=100.0;identity=97.9;matches=1081;mismatches=8;indels=15;unknowns=0;locus=RLOC_00012399
Chr1	stalkie_big_nohaplotig	exon	149649805	149650093	99	-	.	Parent=comp155994_c0_seq1.mrna1;Target=comp155994_c0_seq1 1 289 -
Chr1	stalkie_big_nohaplotig	exon	149650154	149650304	100	-	.	Parent=comp155994_c0_seq1.mrna1;Target=comp155994_c0_seq1 290 440 -
Chr1	stalkie_big_nohaplotig	exon	149650372	149650538	97	-	.	Parent=comp155994_c0_seq1.mrna1;Target=comp155994_c0_seq1 441 607 -
Chr1	stalkie_big_nohaplotig	exon	149650644	149651125	96	-	.	Parent=comp155994_c0_seq1.mrna1;Target=comp155994_c0_seq1 608 1104 -
Chr1	stalkie_big_nohaplotig	CDS	149649984	149650093	.	-	2	Parent=comp155994_c0_seq1.mrna1;Target=comp155994_c0_seq1 180 289 .
Chr1	stalkie_big_nohaplotig	CDS	149650154	149650304	.	-	0	Parent=comp155994_c0_seq1.mrna1;Target=comp155994_c0_seq1 290 440 .
Chr1	stalkie_big_nohaplotig	CDS	149650372	149650538	.	-	2	Parent=comp155994_c0_seq1.mrna1;Target=comp155994_c0_seq1 441 607 .
Chr1	stalkie_big_nohaplotig	CDS	149650644	149650758	.	-	0	Parent=comp155994_c0_seq1.mrna1;Target=comp155994_c0_seq1 608 722 .
Chr1	gffcl	locus	149651971	149658737	.	-	.	ID=RLOC_00012400;geneIDs=FBgn0030844.1.path1;transcripts=FBgn0030844.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149651971	149658737	.	-	.	ID=FBgn0030844.1.mrna1;geneID=FBgn0030844.1.path1;Name=FBgn0030844.1;Dir=sensecoverage=100.0;identity=99.1;matches=1740;mismatches=15;indels=0;unknowns=0;locus=RLOC_00012400
Chr1	stalkie_big_nohaplotig	exon	149651971	149652066	98	-	.	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 1660 1755 +
Chr1	stalkie_big_nohaplotig	exon	149652956	149653204	99	-	.	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 1411 1659 +
Chr1	stalkie_big_nohaplotig	exon	149653274	149653484	99	-	.	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 1200 1410 +
Chr1	stalkie_big_nohaplotig	exon	149653717	149653855	100	-	.	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 1061 1199 +
Chr1	stalkie_big_nohaplotig	exon	149653958	149654100	100	-	.	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 918 1060 +
Chr1	stalkie_big_nohaplotig	exon	149654325	149654464	100	-	.	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 778 917 +
Chr1	stalkie_big_nohaplotig	exon	149654529	149654610	100	-	.	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 696 777 +
Chr1	stalkie_big_nohaplotig	exon	149655376	149655521	98	-	.	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 550 695 +
Chr1	stalkie_big_nohaplotig	exon	149655645	149655798	99	-	.	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 396 549 +
Chr1	stalkie_big_nohaplotig	exon	149655856	149655967	97	-	.	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 284 395 +
Chr1	stalkie_big_nohaplotig	exon	149657987	149658084	96	-	.	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 186 283 +
Chr1	stalkie_big_nohaplotig	exon	149658553	149658737	98	-	.	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 1 185 +
Chr1	stalkie_big_nohaplotig	CDS	149651971	149652066	.	-	0	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 1660 1755 +
Chr1	stalkie_big_nohaplotig	CDS	149652956	149653204	.	-	0	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 1411 1659 +
Chr1	stalkie_big_nohaplotig	CDS	149653274	149653484	.	-	1	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 1200 1410 +
Chr1	stalkie_big_nohaplotig	CDS	149653717	149653855	.	-	2	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 1061 1199 +
Chr1	stalkie_big_nohaplotig	CDS	149653958	149654100	.	-	1	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 918 1060 +
Chr1	stalkie_big_nohaplotig	CDS	149654325	149654464	.	-	0	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 778 917 +
Chr1	stalkie_big_nohaplotig	CDS	149654529	149654610	.	-	1	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 696 777 +
Chr1	stalkie_big_nohaplotig	CDS	149655376	149655521	.	-	0	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 550 695 +
Chr1	stalkie_big_nohaplotig	CDS	149655645	149655798	.	-	1	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 396 549 +
Chr1	stalkie_big_nohaplotig	CDS	149655856	149655967	.	-	2	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 284 395 +
Chr1	stalkie_big_nohaplotig	CDS	149657987	149658084	.	-	1	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 186 283 +
Chr1	stalkie_big_nohaplotig	CDS	149658553	149658704	.	-	0	Parent=FBgn0030844.1.mrna1;Target=FBgn0030844.1 34 185 +
Chr1	gffcl	locus	149694825	149695083	.	-	.	ID=RLOC_00012401;geneIDs=comp82788_c0_seq1.path1;transcripts=comp82788_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149694825	149695083	.	-	.	ID=comp82788_c0_seq1.mrna1;geneID=comp82788_c0_seq1.path1;Name=comp82788_c0_seq1;Dir=indeterminatecoverage=98.9;identity=98.1;matches=254;mismatches=4;indels=1;unknowns=0;Target=comp82788_c0_seq1 258 1 .;CDS_Target=comp82788_c0_seq1 90 1 .;locus=RLOC_00012401
Chr1	stalkie_big_nohaplotig	exon	149694825	149695083	98	-	.	Parent=comp82788_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	149694993	149695083	.	-	0	Parent=comp82788_c0_seq1.mrna1
Chr1	gffcl	locus	149696274	149805229	.	+	.	ID=RLOC_00012402;geneIDs=comp136839_c0_seq1.path1;transcripts=comp136839_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149696274	149805229	.	+	.	ID=comp136839_c0_seq1.mrna1;geneID=comp136839_c0_seq1.path1;Name=comp136839_c0_seq1;Dir=antisensecoverage=100.0;identity=98.8;matches=687;mismatches=7;indels=1;unknowns=0;Target=comp136839_c0_seq1 1 237 .;locus=RLOC_00012402
Chr1	stalkie_big_nohaplotig	exon	149696274	149696571	99	+	.	Parent=comp136839_c0_seq1.mrna1;Target=comp136839_c0_seq1 397 695 -
Chr1	stalkie_big_nohaplotig	exon	149728649	149728698	96	+	.	Parent=comp136839_c0_seq1.mrna1;Target=comp136839_c0_seq1 347 396 -
Chr1	stalkie_big_nohaplotig	exon	149804884	149805229	98	+	.	Parent=comp136839_c0_seq1.mrna1;Target=comp136839_c0_seq1 1 346 -
Chr1	stalkie_big_nohaplotig	CDS	149804993	149805229	.	+	0	Parent=comp136839_c0_seq1.mrna1
Chr1	gffcl	locus	149731093	149731380	.	-	.	ID=RLOC_00012403;geneIDs=comp118778_c0_seq1.path1;transcripts=comp118778_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149731093	149731380	.	-	.	ID=comp118778_c0_seq1.mrna1;geneID=comp118778_c0_seq1.path1;Name=comp118778_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=286;mismatches=2;indels=0;unknowns=0;Target=comp118778_c0_seq1 288 1 .;CDS_Target=comp118778_c0_seq1 243 22 .;locus=RLOC_00012403
Chr1	stalkie_big_nohaplotig	exon	149731093	149731380	99	-	.	Parent=comp118778_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	149731138	149731359	.	-	0	Parent=comp118778_c0_seq1.mrna1
Chr1	gffcl	locus	149778698	149781591	.	+	.	ID=RLOC_00012404;geneIDs=comp118023_c1_seq1.path1,comp151895_c3_seq1.path1;transcripts=comp118023_c1_seq1.mrna1,comp151895_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149778698	149779085	.	+	.	ID=comp118023_c1_seq1.mrna1;geneID=comp118023_c1_seq1.path1;Name=comp118023_c1_seq1;Dir=indeterminatecoverage=96.5;identity=100.0;matches=388;mismatches=0;indels=0;unknowns=0;Target=comp118023_c1_seq1 402 15 .;CDS_Target=comp118023_c1_seq1 279 118 .;locus=RLOC_00012404
Chr1	stalkie_big_nohaplotig	exon	149778698	149779085	100	+	.	Parent=comp118023_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	149778801	149778962	.	+	0	Parent=comp118023_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149778928	149781591	.	+	.	ID=comp151895_c3_seq1.mrna1;geneID=comp151895_c3_seq1.path1;Name=comp151895_c3_seq1;Dir=antisensecoverage=98.6;identity=98.8;matches=1027;mismatches=8;indels=4;unknowns=0;locus=RLOC_00012404
Chr1	stalkie_big_nohaplotig	exon	149778928	149778951	100	+	.	Parent=comp151895_c3_seq1.mrna1;Target=comp151895_c3_seq1 1028 1051 -
Chr1	stalkie_big_nohaplotig	exon	149780497	149780990	98	+	.	Parent=comp151895_c3_seq1.mrna1;Target=comp151895_c3_seq1 536 1027 -
Chr1	stalkie_big_nohaplotig	exon	149781072	149781591	99	+	.	Parent=comp151895_c3_seq1.mrna1;Target=comp151895_c3_seq1 16 535 -
Chr1	stalkie_big_nohaplotig	CDS	149780896	149780990	.	+	0	Parent=comp151895_c3_seq1.mrna1;Target=comp151895_c3_seq1 536 630 .
Chr1	stalkie_big_nohaplotig	CDS	149781072	149781198	.	+	1	Parent=comp151895_c3_seq1.mrna1;Target=comp151895_c3_seq1 409 535 .
Chr1	gffcl	locus	149926737	149947418	.	-	.	ID=RLOC_00012406;geneIDs=comp155629_c0_seq1.path1;transcripts=comp155629_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149926737	149947418	.	-	.	ID=comp155629_c0_seq1.mrna1;geneID=comp155629_c0_seq1.path1;Name=comp155629_c0_seq1;Dir=sensecoverage=97.7;identity=96.5;matches=984;mismatches=30;indels=6;unknowns=0;Target=comp155629_c0_seq1 574 684 +;locus=RLOC_00012406
Chr1	stalkie_big_nohaplotig	exon	149926737	149927396	94	-	.	Parent=comp155629_c0_seq1.mrna1;Target=comp155629_c0_seq1 384 1039 +
Chr1	stalkie_big_nohaplotig	exon	149946979	149947248	99	-	.	Parent=comp155629_c0_seq1.mrna1;Target=comp155629_c0_seq1 114 383 +
Chr1	stalkie_big_nohaplotig	exon	149947330	149947418	100	-	.	Parent=comp155629_c0_seq1.mrna1;Target=comp155629_c0_seq1 25 113 +
Chr1	stalkie_big_nohaplotig	CDS	149927092	149927202	.	-	0	Parent=comp155629_c0_seq1.mrna1
Chr1	gffcl	locus	149997234	149997640	.	+	.	ID=RLOC_00012407;geneIDs=comp149442_c0_seq1.path1;transcripts=comp149442_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	149997234	149997640	.	+	.	ID=comp149442_c0_seq1.mrna1;geneID=comp149442_c0_seq1.path1;Name=comp149442_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=400;mismatches=7;indels=0;unknowns=0;Target=comp149442_c0_seq1 407 1 .;CDS_Target=comp149442_c0_seq1 179 105 .;locus=RLOC_00012407
Chr1	stalkie_big_nohaplotig	exon	149997234	149997640	98	+	.	Parent=comp149442_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	149997338	149997412	.	+	0	Parent=comp149442_c0_seq1.mrna1
Chr1	gffcl	locus	150027279	150037816	.	+	.	ID=RLOC_00012408;geneIDs=FBgn0030482.1.path1;transcripts=FBgn0030482.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150027279	150037816	.	+	.	ID=FBgn0030482.1.mrna1;geneID=FBgn0030482.1.path1;Name=FBgn0030482.1;Dir=sensecoverage=100.0;identity=99.9;matches=1385;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012408
Chr1	stalkie_big_nohaplotig	exon	150027279	150027368	100	+	.	Parent=FBgn0030482.1.mrna1;Target=FBgn0030482.1 1 90 +
Chr1	stalkie_big_nohaplotig	exon	150034034	150034450	100	+	.	Parent=FBgn0030482.1.mrna1;Target=FBgn0030482.1 91 507 +
Chr1	stalkie_big_nohaplotig	exon	150036330	150036560	100	+	.	Parent=FBgn0030482.1.mrna1;Target=FBgn0030482.1 508 738 +
Chr1	stalkie_big_nohaplotig	exon	150036868	150036992	100	+	.	Parent=FBgn0030482.1.mrna1;Target=FBgn0030482.1 739 863 +
Chr1	stalkie_big_nohaplotig	exon	150037137	150037318	100	+	.	Parent=FBgn0030482.1.mrna1;Target=FBgn0030482.1 864 1045 +
Chr1	stalkie_big_nohaplotig	exon	150037389	150037543	100	+	.	Parent=FBgn0030482.1.mrna1;Target=FBgn0030482.1 1046 1200 +
Chr1	stalkie_big_nohaplotig	exon	150037631	150037816	99	+	.	Parent=FBgn0030482.1.mrna1;Target=FBgn0030482.1 1201 1386 +
Chr1	stalkie_big_nohaplotig	CDS	150027279	150027368	.	+	0	Parent=FBgn0030482.1.mrna1;Target=FBgn0030482.1 1 90 +
Chr1	stalkie_big_nohaplotig	CDS	150034034	150034450	.	+	0	Parent=FBgn0030482.1.mrna1;Target=FBgn0030482.1 91 507 +
Chr1	stalkie_big_nohaplotig	CDS	150036330	150036560	.	+	0	Parent=FBgn0030482.1.mrna1;Target=FBgn0030482.1 508 738 +
Chr1	stalkie_big_nohaplotig	CDS	150036868	150036992	.	+	0	Parent=FBgn0030482.1.mrna1;Target=FBgn0030482.1 739 863 +
Chr1	stalkie_big_nohaplotig	CDS	150037137	150037318	.	+	1	Parent=FBgn0030482.1.mrna1;Target=FBgn0030482.1 864 1045 +
Chr1	stalkie_big_nohaplotig	CDS	150037389	150037543	.	+	2	Parent=FBgn0030482.1.mrna1;Target=FBgn0030482.1 1046 1200 +
Chr1	stalkie_big_nohaplotig	CDS	150037631	150037816	.	+	0	Parent=FBgn0030482.1.mrna1;Target=FBgn0030482.1 1201 1386 +
Chr1	gffcl	locus	150030196	150030556	.	-	.	ID=RLOC_00012409;geneIDs=comp128518_c1_seq1.path1;transcripts=comp128518_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150030196	150030556	.	-	.	ID=comp128518_c1_seq1.mrna1;geneID=comp128518_c1_seq1.path1;Name=comp128518_c1_seq1;Dir=indeterminatecoverage=91.6;identity=98.6;matches=356;mismatches=4;indels=1;unknowns=0;Target=comp128518_c1_seq1 360 1 .;CDS_Target=comp128518_c1_seq1 66 1 .;locus=RLOC_00012409
Chr1	stalkie_big_nohaplotig	exon	150030196	150030556	98	-	.	Parent=comp128518_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150030491	150030556	.	-	0	Parent=comp128518_c1_seq1.mrna1
Chr1	gffcl	locus	150035159	150035830	.	-	.	ID=RLOC_00012410;geneIDs=comp149537_c1_seq1.path1;transcripts=comp149537_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150035159	150035830	.	-	.	ID=comp149537_c1_seq1.mrna1;geneID=comp149537_c1_seq1.path1;Name=comp149537_c1_seq1;Dir=indeterminatecoverage=95.5;identity=99.1;matches=667;mismatches=5;indels=1;unknowns=0;Target=comp149537_c1_seq1 673 1 .;CDS_Target=comp149537_c1_seq1 390 229 .;locus=RLOC_00012410
Chr1	stalkie_big_nohaplotig	exon	150035159	150035830	99	-	.	Parent=comp149537_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150035441	150035602	.	-	0	Parent=comp149537_c1_seq1.mrna1
Chr1	gffcl	locus	150040268	150040640	.	+	.	ID=RLOC_00012411;geneIDs=comp139227_c0_seq1.path1;transcripts=comp139227_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150040268	150040640	.	+	.	ID=comp139227_c0_seq1.mrna1;geneID=comp139227_c0_seq1.path1;Name=comp139227_c0_seq1;Dir=indeterminatecoverage=95.2;identity=99.2;matches=370;mismatches=3;indels=0;unknowns=0;Target=comp139227_c0_seq1 373 1 .;CDS_Target=comp139227_c0_seq1 322 224 .;locus=RLOC_00012411
Chr1	stalkie_big_nohaplotig	exon	150040268	150040640	99	+	.	Parent=comp139227_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150040491	150040589	.	+	0	Parent=comp139227_c0_seq1.mrna1
Chr1	gffcl	locus	150040758	150041335	.	-	.	ID=RLOC_00012412;geneIDs=comp160258_c0_seq1.path1;transcripts=comp160258_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150040758	150041335	.	-	.	ID=comp160258_c0_seq1.mrna1;geneID=comp160258_c0_seq1.path1;Name=comp160258_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=566;mismatches=11;indels=1;unknowns=0;Target=comp160258_c0_seq1 577 1 .;CDS_Target=comp160258_c0_seq1 98 3 .;locus=RLOC_00012412
Chr1	stalkie_big_nohaplotig	exon	150040758	150041335	97	-	.	Parent=comp160258_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150041237	150041333	.	-	0	Parent=comp160258_c0_seq1.mrna1
Chr1	gffcl	locus	150051661	150053563	.	+	.	ID=RLOC_00012414;geneIDs=FBgn0030342.1.path1;transcripts=FBgn0030342.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150051661	150053563	.	+	.	ID=FBgn0030342.1.mrna1;geneID=FBgn0030342.1.path1;Name=FBgn0030342.1;Dir=sensecoverage=100.0;identity=99.2;matches=1761;mismatches=15;indels=0;unknowns=0;locus=RLOC_00012414
Chr1	stalkie_big_nohaplotig	exon	150051661	150052743	99	+	.	Parent=FBgn0030342.1.mrna1;Target=FBgn0030342.1 1 1083 +
Chr1	stalkie_big_nohaplotig	exon	150052803	150053013	98	+	.	Parent=FBgn0030342.1.mrna1;Target=FBgn0030342.1 1084 1294 +
Chr1	stalkie_big_nohaplotig	exon	150053082	150053563	99	+	.	Parent=FBgn0030342.1.mrna1;Target=FBgn0030342.1 1295 1776 +
Chr1	stalkie_big_nohaplotig	CDS	150051661	150052743	.	+	0	Parent=FBgn0030342.1.mrna1;Target=FBgn0030342.1 1 1083 +
Chr1	stalkie_big_nohaplotig	CDS	150052803	150053013	.	+	0	Parent=FBgn0030342.1.mrna1;Target=FBgn0030342.1 1084 1294 +
Chr1	stalkie_big_nohaplotig	CDS	150053082	150053563	.	+	2	Parent=FBgn0030342.1.mrna1;Target=FBgn0030342.1 1295 1776 +
Chr1	gffcl	locus	150081661	150084511	.	+	.	ID=RLOC_00012415;geneIDs=FBgn0040319.1.path1,comp155357_c0_seq1.path2;transcripts=FBgn0040319.1.mrna1,comp155357_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	150081661	150084511	.	+	.	ID=FBgn0040319.1.mrna1;geneID=FBgn0040319.1.path1;Name=FBgn0040319.1;Dir=sensecoverage=98.8;identity=99.8;matches=1750;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012415
Chr1	stalkie_big_nohaplotig	exon	150081661	150082288	99	+	.	Parent=FBgn0040319.1.mrna1;Target=FBgn0040319.1 4 631 +
Chr1	stalkie_big_nohaplotig	exon	150083237	150083988	99	+	.	Parent=FBgn0040319.1.mrna1;Target=FBgn0040319.1 632 1383 +
Chr1	stalkie_big_nohaplotig	exon	150084067	150084258	100	+	.	Parent=FBgn0040319.1.mrna1;Target=FBgn0040319.1 1384 1575 +
Chr1	stalkie_big_nohaplotig	exon	150084330	150084511	100	+	.	Parent=FBgn0040319.1.mrna1;Target=FBgn0040319.1 1576 1757 +
Chr1	stalkie_big_nohaplotig	CDS	150081661	150082288	.	+	0	Parent=FBgn0040319.1.mrna1;Target=FBgn0040319.1 4 631 +
Chr1	stalkie_big_nohaplotig	CDS	150083237	150083988	.	+	2	Parent=FBgn0040319.1.mrna1;Target=FBgn0040319.1 632 1383 +
Chr1	stalkie_big_nohaplotig	CDS	150084067	150084258	.	+	0	Parent=FBgn0040319.1.mrna1;Target=FBgn0040319.1 1384 1575 +
Chr1	stalkie_big_nohaplotig	CDS	150084330	150084509	.	+	0	Parent=FBgn0040319.1.mrna1;Target=FBgn0040319.1 1576 1755 +
Chr1	stalkie_big_nohaplotig	mRNA	150084299	150084350	.	+	.	ID=comp155357_c0_seq1.mrna2;geneID=comp155357_c0_seq1.path2;Name=comp155357_c0_seq1;Dir=indeterminatecoverage=6.2;identity=100.0;matches=52;mismatches=0;indels=0;unknowns=0;Target=comp155357_c0_seq1 837 786 .;locus=RLOC_00012415
Chr1	stalkie_big_nohaplotig	exon	150084299	150084350	100	+	.	Parent=comp155357_c0_seq1.mrna2
Chr1	gffcl	locus	150087112	150087587	.	-	.	ID=RLOC_00012416;geneIDs=FBgn0036581.1.path1;transcripts=FBgn0036581.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150087112	150087587	.	-	.	ID=FBgn0036581.1.mrna1;geneID=FBgn0036581.1.path1;Name=FBgn0036581.1;Dir=sensecoverage=100.0;identity=99.3;matches=405;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012416
Chr1	stalkie_big_nohaplotig	exon	150087112	150087385	99	-	.	Parent=FBgn0036581.1.mrna1;Target=FBgn0036581.1 135 408 +
Chr1	stalkie_big_nohaplotig	exon	150087454	150087587	98	-	.	Parent=FBgn0036581.1.mrna1;Target=FBgn0036581.1 1 134 +
Chr1	stalkie_big_nohaplotig	CDS	150087112	150087385	.	-	1	Parent=FBgn0036581.1.mrna1;Target=FBgn0036581.1 135 408 +
Chr1	stalkie_big_nohaplotig	CDS	150087454	150087587	.	-	0	Parent=FBgn0036581.1.mrna1;Target=FBgn0036581.1 1 134 +
Chr1	gffcl	locus	150088646	150089720	.	+	.	ID=RLOC_00012417;geneIDs=FBgn0033769.1.path1;transcripts=FBgn0033769.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150088646	150089720	.	+	.	ID=FBgn0033769.1.mrna1;geneID=FBgn0033769.1.path1;Name=FBgn0033769.1;Dir=sensecoverage=100.0;identity=98.8;matches=892;mismatches=11;indels=0;unknowns=0;locus=RLOC_00012417
Chr1	stalkie_big_nohaplotig	exon	150088646	150088673	100	+	.	Parent=FBgn0033769.1.mrna1;Target=FBgn0033769.1 1 28 +
Chr1	stalkie_big_nohaplotig	exon	150088728	150089173	99	+	.	Parent=FBgn0033769.1.mrna1;Target=FBgn0033769.1 29 474 +
Chr1	stalkie_big_nohaplotig	exon	150089225	150089458	97	+	.	Parent=FBgn0033769.1.mrna1;Target=FBgn0033769.1 475 708 +
Chr1	stalkie_big_nohaplotig	exon	150089526	150089720	97	+	.	Parent=FBgn0033769.1.mrna1;Target=FBgn0033769.1 709 903 +
Chr1	stalkie_big_nohaplotig	CDS	150088646	150088673	.	+	0	Parent=FBgn0033769.1.mrna1;Target=FBgn0033769.1 1 28 +
Chr1	stalkie_big_nohaplotig	CDS	150088728	150089173	.	+	2	Parent=FBgn0033769.1.mrna1;Target=FBgn0033769.1 29 474 +
Chr1	stalkie_big_nohaplotig	CDS	150089225	150089458	.	+	0	Parent=FBgn0033769.1.mrna1;Target=FBgn0033769.1 475 708 +
Chr1	stalkie_big_nohaplotig	CDS	150089526	150089720	.	+	0	Parent=FBgn0033769.1.mrna1;Target=FBgn0033769.1 709 903 +
Chr1	gffcl	locus	150091569	150092282	.	+	.	ID=RLOC_00012418;geneIDs=FBgn0030341.1.path1;transcripts=FBgn0030341.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150091569	150092282	.	+	.	ID=FBgn0030341.1.mrna1;geneID=FBgn0030341.1.path1;Name=FBgn0030341.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=713;mismatches=1;indels=0;unknowns=0;Target=FBgn0030341.1 714 1 .;locus=RLOC_00012418
Chr1	stalkie_big_nohaplotig	exon	150091569	150092282	99	+	.	Parent=FBgn0030341.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150091569	150092282	.	+	0	Parent=FBgn0030341.1.mrna1
Chr1	gffcl	locus	150092633	150093176	.	+	.	ID=RLOC_00012419;geneIDs=comp137724_c0_seq1.path1;transcripts=comp137724_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150092633	150093176	.	+	.	ID=comp137724_c0_seq1.mrna1;geneID=comp137724_c0_seq1.path1;Name=comp137724_c0_seq1;Dir=indeterminatecoverage=96.7;identity=93.9;matches=522;mismatches=16;indels=18;unknowns=0;Target=comp137724_c0_seq1 550 1 .;CDS_Target=comp137724_c0_seq1 474 382 .;locus=RLOC_00012419
Chr1	stalkie_big_nohaplotig	exon	150092633	150093176	93	+	.	Parent=comp137724_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150093014	150093094	.	+	0	Parent=comp137724_c0_seq1.mrna1
Chr1	gffcl	locus	150095588	150098254	.	-	.	ID=RLOC_00012420;geneIDs=FBgn0025866.1.path1;transcripts=FBgn0025866.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150095588	150098254	.	-	.	ID=FBgn0025866.1.mrna1;geneID=FBgn0025866.1.path1;Name=FBgn0025866.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=2653;mismatches=14;indels=0;unknowns=0;Target=FBgn0025866.1 2667 1 .;locus=RLOC_00012420
Chr1	stalkie_big_nohaplotig	exon	150095588	150098254	99	-	.	Parent=FBgn0025866.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150095588	150098254	.	-	0	Parent=FBgn0025866.1.mrna1
Chr1	gffcl	locus	150112187	150123895	.	+	.	ID=RLOC_00012421;geneIDs=FBgn0261266.1.path1;transcripts=FBgn0261266.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150112187	150123895	.	+	.	ID=FBgn0261266.1.mrna1;geneID=FBgn0261266.1.path1;Name=FBgn0261266.1;Dir=sensecoverage=100.0;identity=100.0;matches=786;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012421
Chr1	stalkie_big_nohaplotig	exon	150112187	150112408	100	+	.	Parent=FBgn0261266.1.mrna1;Target=FBgn0261266.1 1 222 +
Chr1	stalkie_big_nohaplotig	exon	150112491	150112740	100	+	.	Parent=FBgn0261266.1.mrna1;Target=FBgn0261266.1 223 472 +
Chr1	stalkie_big_nohaplotig	exon	150123520	150123683	100	+	.	Parent=FBgn0261266.1.mrna1;Target=FBgn0261266.1 473 636 +
Chr1	stalkie_big_nohaplotig	exon	150123746	150123895	100	+	.	Parent=FBgn0261266.1.mrna1;Target=FBgn0261266.1 637 786 +
Chr1	stalkie_big_nohaplotig	CDS	150112187	150112408	.	+	0	Parent=FBgn0261266.1.mrna1;Target=FBgn0261266.1 1 222 +
Chr1	stalkie_big_nohaplotig	CDS	150112491	150112740	.	+	0	Parent=FBgn0261266.1.mrna1;Target=FBgn0261266.1 223 472 +
Chr1	stalkie_big_nohaplotig	CDS	150123520	150123683	.	+	2	Parent=FBgn0261266.1.mrna1;Target=FBgn0261266.1 473 636 +
Chr1	stalkie_big_nohaplotig	CDS	150123746	150123895	.	+	0	Parent=FBgn0261266.1.mrna1;Target=FBgn0261266.1 637 786 +
Chr1	gffcl	locus	150205710	150206236	.	-	.	ID=RLOC_00012422;geneIDs=comp149509_c0_seq1.path1;transcripts=comp149509_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150205710	150206236	.	-	.	ID=comp149509_c0_seq1.mrna1;geneID=comp149509_c0_seq1.path1;Name=comp149509_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.0;matches=515;mismatches=6;indels=10;unknowns=0;Target=comp149509_c0_seq1 525 1 .;CDS_Target=comp149509_c0_seq1 381 325 .;locus=RLOC_00012422
Chr1	stalkie_big_nohaplotig	exon	150205710	150206236	96	-	.	Parent=comp149509_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150205856	150205908	.	-	0	Parent=comp149509_c0_seq1.mrna1
Chr1	gffcl	locus	150206471	150206905	.	+	.	ID=RLOC_00012423;geneIDs=comp51728_c0_seq1.path1;transcripts=comp51728_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150206471	150206905	.	+	.	ID=comp51728_c0_seq1.mrna1;geneID=comp51728_c0_seq1.path1;Name=comp51728_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=434;mismatches=1;indels=0;unknowns=0;Target=comp51728_c0_seq1 435 1 .;CDS_Target=comp51728_c0_seq1 435 334 .;locus=RLOC_00012423
Chr1	stalkie_big_nohaplotig	exon	150206471	150206905	99	+	.	Parent=comp51728_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150206804	150206905	.	+	0	Parent=comp51728_c0_seq1.mrna1
Chr1	gffcl	locus	150216691	150378170	.	.	.	ID=RLOC_00012424;geneIDs=FBgn0029659.2.path1,comp64413_c0_seq1.path1,comp135929_c0_seq1.path1,comp135929_c0_seq1.path2;transcripts=comp135929_c0_seq1.mrna2,comp64413_c0_seq1.mrna1,FBgn0029659.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150216691	150378170	.	-	.	ID=comp135929_c0_seq1.mrna2;geneID=comp135929_c0_seq1.path2;Name=comp135929_c0_seq1;Dir=indeterminatecoverage=71.9;identity=94.6;matches=789;mismatches=13;indels=32;unknowns=0;Target=comp135929_c0_seq1 774 622 .;locus=RLOC_00012424
Chr1	stalkie_big_nohaplotig	exon	150216691	150217303	98	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 1203 591 .
Chr1	stalkie_big_nohaplotig	exon	150220620	150220622	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 590 588 .
Chr1	stalkie_big_nohaplotig	exon	150221138	150221144	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 587 581 .
Chr1	stalkie_big_nohaplotig	exon	150223946	150223954	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 580 572 .
Chr1	stalkie_big_nohaplotig	exon	150227623	150227631	66	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 571 563 .
Chr1	stalkie_big_nohaplotig	exon	150233541	150233549	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 562 554 .
Chr1	stalkie_big_nohaplotig	exon	150239671	150239680	41	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 553 530 .
Chr1	stalkie_big_nohaplotig	exon	150244807	150244811	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 529 525 .
Chr1	stalkie_big_nohaplotig	exon	150250476	150250496	44	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 524 496 .
Chr1	stalkie_big_nohaplotig	exon	150250573	150250584	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 495 484 .
Chr1	stalkie_big_nohaplotig	exon	150256857	150256862	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 483 478 .
Chr1	stalkie_big_nohaplotig	exon	150263202	150263211	90	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 440 431 .
Chr1	stalkie_big_nohaplotig	exon	150268035	150268046	91	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 430 419 .
Chr1	stalkie_big_nohaplotig	exon	150271269	150271271	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 418 416 .
Chr1	stalkie_big_nohaplotig	exon	150277346	150277350	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 415 411 .
Chr1	stalkie_big_nohaplotig	exon	150279566	150279567	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 410 409 .
Chr1	stalkie_big_nohaplotig	exon	150285676	150285680	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 408 404 .
Chr1	stalkie_big_nohaplotig	exon	150297275	150297284	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 403 394 .
Chr1	stalkie_big_nohaplotig	exon	150310432	150310439	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 393 386 .
Chr1	stalkie_big_nohaplotig	exon	150323207	150323210	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 385 382 .
Chr1	stalkie_big_nohaplotig	exon	150329108	150329110	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 381 379 .
Chr1	stalkie_big_nohaplotig	exon	150333515	150333519	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 378 374 .
Chr1	stalkie_big_nohaplotig	exon	150334272	150334273	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 373 372 .
Chr1	stalkie_big_nohaplotig	exon	150342345	150342349	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 371 367 .
Chr1	stalkie_big_nohaplotig	exon	150349578	150349580	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 366 364 .
Chr1	stalkie_big_nohaplotig	exon	150355270	150355273	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 363 360 .
Chr1	stalkie_big_nohaplotig	exon	150360339	150360342	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 359 356 .
Chr1	stalkie_big_nohaplotig	exon	150361731	150361737	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 355 349 .
Chr1	stalkie_big_nohaplotig	exon	150365830	150365835	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 348 343 .
Chr1	stalkie_big_nohaplotig	exon	150378167	150378170	100	-	.	Parent=comp135929_c0_seq1.mrna2;Target=comp135929_c0_seq1 342 339 .
Chr1	stalkie_big_nohaplotig	CDS	150217120	150217272	.	-	0	Parent=comp135929_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	150267627	150268357	.	-	.	ID=comp64413_c0_seq1.mrna1;geneID=comp64413_c0_seq1.path1;Name=comp64413_c0_seq1;Dir=indeterminatecoverage=94.9;identity=98.8;matches=723;mismatches=1;indels=8;unknowns=0;Target=comp64413_c0_seq1 764 40 .;CDS_Target=comp64413_c0_seq1 200 42 .;locus=RLOC_00012424
Chr1	stalkie_big_nohaplotig	exon	150267627	150268357	98	-	.	Parent=comp64413_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150268197	150268355	.	-	0	Parent=comp64413_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150365756	150366360	.	-	.	ID=FBgn0029659.2.mrna1;geneID=FBgn0029659.2.path1;Name=FBgn0029659.2;Dir=indeterminatecoverage=99.3;identity=99.7;matches=603;mismatches=2;indels=0;unknowns=0;Target=FBgn0029659.2 609 5 .;CDS_Target=FBgn0029659.2 609 7 .;locus=RLOC_00012424
Chr1	stalkie_big_nohaplotig	exon	150365756	150366360	99	-	.	Parent=FBgn0029659.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150365756	150366358	.	-	0	Parent=FBgn0029659.2.mrna1
Chr1	gffcl	locus	150229645	150264248	.	+	.	ID=RLOC_00012425;geneIDs=FBgn0262656.1.path1;transcripts=FBgn0262656.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150229645	150264248	.	+	.	ID=FBgn0262656.1.mrna1;geneID=FBgn0262656.1.path1;Name=FBgn0262656.1;Dir=sensecoverage=98.9;identity=99.5;matches=2419;mismatches=5;indels=8;unknowns=0;locus=RLOC_00012425
Chr1	stalkie_big_nohaplotig	exon	150229645	150231274	99	+	.	Parent=FBgn0262656.1.mrna1;Target=FBgn0262656.1 29 1666 +
Chr1	stalkie_big_nohaplotig	exon	150263455	150264248	99	+	.	Parent=FBgn0262656.1.mrna1;Target=FBgn0262656.1 1667 2460 +
Chr1	stalkie_big_nohaplotig	CDS	150229801	150231274	.	+	0	Parent=FBgn0262656.1.mrna1;Target=FBgn0262656.1 187 1666 +
Chr1	stalkie_big_nohaplotig	CDS	150263455	150264248	.	+	2	Parent=FBgn0262656.1.mrna1;Target=FBgn0262656.1 1667 2460 +
Chr1	gffcl	locus	150265954	150266370	.	+	.	ID=RLOC_00012426;geneIDs=comp66580_c0_seq1.path1;transcripts=comp66580_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150265954	150266370	.	+	.	ID=comp66580_c0_seq1.mrna1;geneID=comp66580_c0_seq1.path1;Name=comp66580_c0_seq1;Dir=indeterminatecoverage=97.4;identity=99.8;matches=416;mismatches=1;indels=0;unknowns=0;Target=comp66580_c0_seq1 427 11 .;CDS_Target=comp66580_c0_seq1 227 12 .;locus=RLOC_00012426
Chr1	stalkie_big_nohaplotig	exon	150265954	150266370	99	+	.	Parent=comp66580_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150265955	150266170	.	+	0	Parent=comp66580_c0_seq1.mrna1
Chr1	gffcl	locus	150268410	150268695	.	-	.	ID=RLOC_00012427;geneIDs=comp355564_c0_seq1.path1;transcripts=comp355564_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150268410	150268695	.	-	.	ID=comp355564_c0_seq1.mrna1;geneID=comp355564_c0_seq1.path1;Name=comp355564_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=285;mismatches=1;indels=0;unknowns=0;Target=comp355564_c0_seq1 287 2 .;CDS_Target=comp355564_c0_seq1 287 165 .;locus=RLOC_00012427
Chr1	stalkie_big_nohaplotig	exon	150268410	150268695	99	-	.	Parent=comp355564_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150268410	150268532	.	-	0	Parent=comp355564_c0_seq1.mrna1
Chr1	gffcl	locus	150272482	150273595	.	-	.	ID=RLOC_00012428;geneIDs=comp159717_c0_seq1.path1;transcripts=comp159717_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150272482	150273595	.	-	.	ID=comp159717_c0_seq1.mrna1;geneID=comp159717_c0_seq1.path1;Name=comp159717_c0_seq1;Dir=indeterminatecoverage=98.8;identity=96.2;matches=1074;mismatches=38;indels=4;unknowns=0;Target=comp159717_c0_seq1 1118 5 .;CDS_Target=comp159717_c0_seq1 1002 883 .;locus=RLOC_00012428
Chr1	stalkie_big_nohaplotig	exon	150272482	150273595	96	-	.	Parent=comp159717_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150272598	150272717	.	-	0	Parent=comp159717_c0_seq1.mrna1
Chr1	gffcl	locus	150364606	150365392	.	+	.	ID=RLOC_00012429;geneIDs=comp153162_c0_seq1.path1;transcripts=comp153162_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150364606	150365392	.	+	.	ID=comp153162_c0_seq1.mrna1;geneID=comp153162_c0_seq1.path1;Name=comp153162_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.1;matches=785;mismatches=2;indels=5;unknowns=0;Target=comp153162_c0_seq1 802 11 .;CDS_Target=comp153162_c0_seq1 697 533 .;locus=RLOC_00012429
Chr1	stalkie_big_nohaplotig	exon	150364606	150365392	99	+	.	Parent=comp153162_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150365128	150365292	.	+	0	Parent=comp153162_c0_seq1.mrna1
Chr1	gffcl	locus	150367995	150368825	.	+	.	ID=RLOC_00012430;geneIDs=comp155890_c0_seq1.path1;transcripts=comp155890_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150367995	150368825	.	+	.	ID=comp155890_c0_seq1.mrna1;geneID=comp155890_c0_seq1.path1;Name=comp155890_c0_seq1;Dir=indeterminatecoverage=98.0;identity=98.6;matches=824;mismatches=5;indels=7;unknowns=0;Target=comp155890_c0_seq1 851 18 .;CDS_Target=comp155890_c0_seq1 120 19 .;locus=RLOC_00012430
Chr1	stalkie_big_nohaplotig	exon	150367995	150368825	98	+	.	Parent=comp155890_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150367996	150368099	.	+	0	Parent=comp155890_c0_seq1.mrna1
Chr1	gffcl	locus	150371348	150448780	.	+	.	ID=RLOC_00012431;geneIDs=FBgn0043799.1.path1;transcripts=FBgn0043799.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150371348	150448780	.	+	.	ID=FBgn0043799.1.mrna1;geneID=FBgn0043799.1.path1;Name=FBgn0043799.1;Dir=sensecoverage=100.0;identity=99.5;matches=1164;mismatches=6;indels=0;unknowns=0;locus=RLOC_00012431
Chr1	stalkie_big_nohaplotig	exon	150371348	150371446	97	+	.	Parent=FBgn0043799.1.mrna1;Target=FBgn0043799.1 1 99 +
Chr1	stalkie_big_nohaplotig	exon	150371596	150371720	100	+	.	Parent=FBgn0043799.1.mrna1;Target=FBgn0043799.1 100 224 +
Chr1	stalkie_big_nohaplotig	exon	150440534	150440672	99	+	.	Parent=FBgn0043799.1.mrna1;Target=FBgn0043799.1 225 363 +
Chr1	stalkie_big_nohaplotig	exon	150445539	150445642	100	+	.	Parent=FBgn0043799.1.mrna1;Target=FBgn0043799.1 364 467 +
Chr1	stalkie_big_nohaplotig	exon	150445832	150445977	100	+	.	Parent=FBgn0043799.1.mrna1;Target=FBgn0043799.1 468 613 +
Chr1	stalkie_big_nohaplotig	exon	150448166	150448545	100	+	.	Parent=FBgn0043799.1.mrna1;Target=FBgn0043799.1 614 993 +
Chr1	stalkie_big_nohaplotig	exon	150448604	150448780	98	+	.	Parent=FBgn0043799.1.mrna1;Target=FBgn0043799.1 994 1170 +
Chr1	stalkie_big_nohaplotig	CDS	150371348	150371446	.	+	0	Parent=FBgn0043799.1.mrna1;Target=FBgn0043799.1 1 99 +
Chr1	stalkie_big_nohaplotig	CDS	150371596	150371720	.	+	0	Parent=FBgn0043799.1.mrna1;Target=FBgn0043799.1 100 224 +
Chr1	stalkie_big_nohaplotig	CDS	150440534	150440672	.	+	1	Parent=FBgn0043799.1.mrna1;Target=FBgn0043799.1 225 363 +
Chr1	stalkie_big_nohaplotig	CDS	150445539	150445642	.	+	0	Parent=FBgn0043799.1.mrna1;Target=FBgn0043799.1 364 467 +
Chr1	stalkie_big_nohaplotig	CDS	150445832	150445977	.	+	1	Parent=FBgn0043799.1.mrna1;Target=FBgn0043799.1 468 613 +
Chr1	stalkie_big_nohaplotig	CDS	150448166	150448545	.	+	2	Parent=FBgn0043799.1.mrna1;Target=FBgn0043799.1 614 993 +
Chr1	stalkie_big_nohaplotig	CDS	150448604	150448780	.	+	0	Parent=FBgn0043799.1.mrna1;Target=FBgn0043799.1 994 1170 +
Chr1	gffcl	locus	150448883	150450230	.	+	.	ID=RLOC_00012432;geneIDs=comp160055_c1_seq1.path1;transcripts=comp160055_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150448883	150450230	.	+	.	ID=comp160055_c1_seq1.mrna1;geneID=comp160055_c1_seq1.path1;Name=comp160055_c1_seq1;Dir=indeterminatecoverage=100.0;identity=92.6;matches=1255;mismatches=60;indels=40;unknowns=0;Target=comp160055_c1_seq1 1322 1 .;CDS_Target=comp160055_c1_seq1 638 450 .;locus=RLOC_00012432
Chr1	stalkie_big_nohaplotig	exon	150448883	150450230	92	+	.	Parent=comp160055_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150449349	150449537	.	+	0	Parent=comp160055_c1_seq1.mrna1
Chr1	gffcl	locus	150450548	150450788	.	-	.	ID=RLOC_00012433;geneIDs=comp118762_c0_seq1.path1;transcripts=comp118762_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150450548	150450788	.	-	.	ID=comp118762_c0_seq1.mrna1;geneID=comp118762_c0_seq1.path1;Name=comp118762_c0_seq1;Dir=indeterminatecoverage=90.4;identity=96.7;matches=234;mismatches=0;indels=8;unknowns=0;Target=comp118762_c0_seq1 244 10 .;CDS_Target=comp118762_c0_seq1 116 12 .;locus=RLOC_00012433
Chr1	stalkie_big_nohaplotig	exon	150450548	150450788	96	-	.	Parent=comp118762_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150450682	150450786	.	-	0	Parent=comp118762_c0_seq1.mrna1
Chr1	gffcl	locus	150454374	150455652	.	-	.	ID=RLOC_00012435;geneIDs=comp157592_c0_seq1.path1;transcripts=comp157592_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150454374	150455652	.	-	.	ID=comp157592_c0_seq1.mrna1;geneID=comp157592_c0_seq1.path1;Name=comp157592_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.7;matches=1217;mismatches=58;indels=10;unknowns=0;Target=comp157592_c0_seq1 1281 1 .;CDS_Target=comp157592_c0_seq1 674 567 .;locus=RLOC_00012435
Chr1	stalkie_big_nohaplotig	exon	150454374	150455652	94	-	.	Parent=comp157592_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150454979	150455086	.	-	0	Parent=comp157592_c0_seq1.mrna1
Chr1	gffcl	locus	150476155	150477500	.	-	.	ID=RLOC_00012436;geneIDs=comp151785_c0_seq1.path1;transcripts=comp151785_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150476155	150477500	.	-	.	ID=comp151785_c0_seq1.mrna1;geneID=comp151785_c0_seq1.path1;Name=comp151785_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=1276;mismatches=4;indels=2;unknowns=0;Target=comp151785_c0_seq1 257 469 +;locus=RLOC_00012436
Chr1	stalkie_big_nohaplotig	exon	150476155	150476822	99	-	.	Parent=comp151785_c0_seq1.mrna1;Target=comp151785_c0_seq1 615 1280 +
Chr1	stalkie_big_nohaplotig	exon	150476887	150477500	99	-	.	Parent=comp151785_c0_seq1.mrna1;Target=comp151785_c0_seq1 1 614 +
Chr1	stalkie_big_nohaplotig	CDS	150477032	150477244	.	-	0	Parent=comp151785_c0_seq1.mrna1
Chr1	gffcl	locus	150482018	150483478	.	+	.	ID=RLOC_00012438;geneIDs=FBgn0029664.3.path1;transcripts=FBgn0029664.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150482018	150483478	.	+	.	ID=FBgn0029664.3.mrna1;geneID=FBgn0029664.3.path1;Name=FBgn0029664.3;Dir=sensecoverage=100.0;identity=99.9;matches=1283;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012438
Chr1	stalkie_big_nohaplotig	exon	150482018	150482062	100	+	.	Parent=FBgn0029664.3.mrna1;Target=FBgn0029664.3 1 45 +
Chr1	stalkie_big_nohaplotig	exon	150482128	150482667	100	+	.	Parent=FBgn0029664.3.mrna1;Target=FBgn0029664.3 46 585 +
Chr1	stalkie_big_nohaplotig	exon	150482725	150482981	100	+	.	Parent=FBgn0029664.3.mrna1;Target=FBgn0029664.3 586 842 +
Chr1	stalkie_big_nohaplotig	exon	150483037	150483478	99	+	.	Parent=FBgn0029664.3.mrna1;Target=FBgn0029664.3 843 1284 +
Chr1	stalkie_big_nohaplotig	CDS	150482018	150482062	.	+	0	Parent=FBgn0029664.3.mrna1;Target=FBgn0029664.3 1 45 +
Chr1	stalkie_big_nohaplotig	CDS	150482128	150482667	.	+	0	Parent=FBgn0029664.3.mrna1;Target=FBgn0029664.3 46 585 +
Chr1	stalkie_big_nohaplotig	CDS	150482725	150482981	.	+	0	Parent=FBgn0029664.3.mrna1;Target=FBgn0029664.3 586 842 +
Chr1	stalkie_big_nohaplotig	CDS	150483037	150483478	.	+	1	Parent=FBgn0029664.3.mrna1;Target=FBgn0029664.3 843 1284 +
Chr1	gffcl	locus	150483651	150484813	.	-	.	ID=RLOC_00012439;geneIDs=FBgn0038993.1.path1;transcripts=FBgn0038993.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150483651	150484813	.	-	.	ID=FBgn0038993.1.mrna1;geneID=FBgn0038993.1.path1;Name=FBgn0038993.1;Dir=sensecoverage=100.0;identity=99.7;matches=984;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012439
Chr1	stalkie_big_nohaplotig	exon	150483651	150484029	100	-	.	Parent=FBgn0038993.1.mrna1;Target=FBgn0038993.1 609 987 +
Chr1	stalkie_big_nohaplotig	exon	150484081	150484185	100	-	.	Parent=FBgn0038993.1.mrna1;Target=FBgn0038993.1 504 608 +
Chr1	stalkie_big_nohaplotig	exon	150484311	150484813	99	-	.	Parent=FBgn0038993.1.mrna1;Target=FBgn0038993.1 1 503 +
Chr1	stalkie_big_nohaplotig	CDS	150483651	150484029	.	-	1	Parent=FBgn0038993.1.mrna1;Target=FBgn0038993.1 609 987 +
Chr1	stalkie_big_nohaplotig	CDS	150484081	150484185	.	-	1	Parent=FBgn0038993.1.mrna1;Target=FBgn0038993.1 504 608 +
Chr1	stalkie_big_nohaplotig	CDS	150484311	150484813	.	-	0	Parent=FBgn0038993.1.mrna1;Target=FBgn0038993.1 1 503 +
Chr1	gffcl	locus	150485007	150486333	.	+	.	ID=RLOC_00012440;geneIDs=FBgn0029664.1.path1;transcripts=FBgn0029664.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150485007	150486333	.	+	.	ID=FBgn0029664.1.mrna1;geneID=FBgn0029664.1.path1;Name=FBgn0029664.1;Dir=sensecoverage=100.0;identity=99.9;matches=1217;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012440
Chr1	stalkie_big_nohaplotig	exon	150485007	150485510	99	+	.	Parent=FBgn0029664.1.mrna1;Target=FBgn0029664.1 1 504 +
Chr1	stalkie_big_nohaplotig	exon	150485562	150485818	100	+	.	Parent=FBgn0029664.1.mrna1;Target=FBgn0029664.1 505 761 +
Chr1	stalkie_big_nohaplotig	exon	150485877	150486333	100	+	.	Parent=FBgn0029664.1.mrna1;Target=FBgn0029664.1 762 1218 +
Chr1	stalkie_big_nohaplotig	CDS	150485007	150485510	.	+	0	Parent=FBgn0029664.1.mrna1;Target=FBgn0029664.1 1 504 +
Chr1	stalkie_big_nohaplotig	CDS	150485562	150485818	.	+	0	Parent=FBgn0029664.1.mrna1;Target=FBgn0029664.1 505 761 +
Chr1	stalkie_big_nohaplotig	CDS	150485877	150486333	.	+	1	Parent=FBgn0029664.1.mrna1;Target=FBgn0029664.1 762 1218 +
Chr1	gffcl	locus	150486811	150487386	.	-	.	ID=RLOC_00012441;geneIDs=FBgn0029665.1.path1;transcripts=FBgn0029665.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150486811	150487386	.	-	.	ID=FBgn0029665.1.mrna1;geneID=FBgn0029665.1.path1;Name=FBgn0029665.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=574;mismatches=2;indels=0;unknowns=0;Target=FBgn0029665.1 576 1 .;locus=RLOC_00012441
Chr1	stalkie_big_nohaplotig	exon	150486811	150487386	99	-	.	Parent=FBgn0029665.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150486811	150487386	.	-	0	Parent=FBgn0029665.1.mrna1
Chr1	gffcl	locus	150487658	150490695	.	+	.	ID=RLOC_00012442;geneIDs=FBgn0034631.1.path1;transcripts=FBgn0034631.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150487658	150490695	.	+	.	ID=FBgn0034631.1.mrna1;geneID=FBgn0034631.1.path1;Name=FBgn0034631.1;Dir=sensecoverage=100.0;identity=99.1;matches=2324;mismatches=22;indels=0;unknowns=0;locus=RLOC_00012442
Chr1	stalkie_big_nohaplotig	exon	150487658	150487768	100	+	.	Parent=FBgn0034631.1.mrna1;Target=FBgn0034631.1 1 111 +
Chr1	stalkie_big_nohaplotig	exon	150487835	150487924	100	+	.	Parent=FBgn0034631.1.mrna1;Target=FBgn0034631.1 112 201 +
Chr1	stalkie_big_nohaplotig	exon	150488298	150488535	100	+	.	Parent=FBgn0034631.1.mrna1;Target=FBgn0034631.1 202 439 +
Chr1	stalkie_big_nohaplotig	exon	150488589	150488786	99	+	.	Parent=FBgn0034631.1.mrna1;Target=FBgn0034631.1 440 637 +
Chr1	stalkie_big_nohaplotig	exon	150488913	150490082	99	+	.	Parent=FBgn0034631.1.mrna1;Target=FBgn0034631.1 638 1807 +
Chr1	stalkie_big_nohaplotig	exon	150490157	150490695	98	+	.	Parent=FBgn0034631.1.mrna1;Target=FBgn0034631.1 1808 2346 +
Chr1	stalkie_big_nohaplotig	CDS	150487658	150487768	.	+	0	Parent=FBgn0034631.1.mrna1;Target=FBgn0034631.1 1 111 +
Chr1	stalkie_big_nohaplotig	CDS	150487835	150487924	.	+	0	Parent=FBgn0034631.1.mrna1;Target=FBgn0034631.1 112 201 +
Chr1	stalkie_big_nohaplotig	CDS	150488298	150488535	.	+	0	Parent=FBgn0034631.1.mrna1;Target=FBgn0034631.1 202 439 +
Chr1	stalkie_big_nohaplotig	CDS	150488589	150488786	.	+	2	Parent=FBgn0034631.1.mrna1;Target=FBgn0034631.1 440 637 +
Chr1	stalkie_big_nohaplotig	CDS	150488913	150490082	.	+	2	Parent=FBgn0034631.1.mrna1;Target=FBgn0034631.1 638 1807 +
Chr1	stalkie_big_nohaplotig	CDS	150490157	150490695	.	+	2	Parent=FBgn0034631.1.mrna1;Target=FBgn0034631.1 1808 2346 +
Chr1	gffcl	locus	150492486	150492685	.	-	.	ID=RLOC_00012443;geneIDs=FBgn0030136.1.path1;transcripts=FBgn0030136.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150492486	150492685	.	-	.	ID=FBgn0030136.1.mrna1;geneID=FBgn0030136.1.path1;Name=FBgn0030136.1;Dir=indeterminatecoverage=99.5;identity=100.0;matches=200;mismatches=0;indels=0;unknowns=0;Target=FBgn0030136.1 200 1 .;CDS_Target=FBgn0030136.1 198 1 .;locus=RLOC_00012443
Chr1	stalkie_big_nohaplotig	exon	150492486	150492685	100	-	.	Parent=FBgn0030136.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150492488	150492685	.	-	0	Parent=FBgn0030136.1.mrna1
Chr1	gffcl	locus	150494839	150496214	.	+	.	ID=RLOC_00012444;geneIDs=FBgn0028327.1.path1;transcripts=FBgn0028327.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150494839	150496214	.	+	.	ID=FBgn0028327.1.mrna1;geneID=FBgn0028327.1.path1;Name=FBgn0028327.1;Dir=sensecoverage=100.0;identity=99.2;matches=1056;mismatches=9;indels=0;unknowns=0;locus=RLOC_00012444
Chr1	stalkie_big_nohaplotig	exon	150494839	150495052	99	+	.	Parent=FBgn0028327.1.mrna1;Target=FBgn0028327.1 1 214 +
Chr1	stalkie_big_nohaplotig	exon	150495292	150496011	99	+	.	Parent=FBgn0028327.1.mrna1;Target=FBgn0028327.1 215 934 +
Chr1	stalkie_big_nohaplotig	exon	150496084	150496214	99	+	.	Parent=FBgn0028327.1.mrna1;Target=FBgn0028327.1 935 1065 +
Chr1	stalkie_big_nohaplotig	CDS	150494839	150495052	.	+	0	Parent=FBgn0028327.1.mrna1;Target=FBgn0028327.1 1 214 +
Chr1	stalkie_big_nohaplotig	CDS	150495292	150496011	.	+	2	Parent=FBgn0028327.1.mrna1;Target=FBgn0028327.1 215 934 +
Chr1	stalkie_big_nohaplotig	CDS	150496084	150496214	.	+	2	Parent=FBgn0028327.1.mrna1;Target=FBgn0028327.1 935 1065 +
Chr1	gffcl	locus	150498355	150499624	.	+	.	ID=RLOC_00012445;geneIDs=comp160406_c0_seq1.path1;transcripts=comp160406_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150498355	150499624	.	+	.	ID=comp160406_c0_seq1.mrna1;geneID=comp160406_c0_seq1.path1;Name=comp160406_c0_seq1;Dir=sensecoverage=99.6;identity=97.0;matches=954;mismatches=24;indels=6;unknowns=0;locus=RLOC_00012445
Chr1	stalkie_big_nohaplotig	exon	150498355	150498717	94	+	.	Parent=comp160406_c0_seq1.mrna1;Target=comp160406_c0_seq1 5 373 +
Chr1	stalkie_big_nohaplotig	exon	150498945	150499043	97	+	.	Parent=comp160406_c0_seq1.mrna1;Target=comp160406_c0_seq1 374 472 +
Chr1	stalkie_big_nohaplotig	exon	150499109	150499624	98	+	.	Parent=comp160406_c0_seq1.mrna1;Target=comp160406_c0_seq1 473 988 +
Chr1	stalkie_big_nohaplotig	CDS	150498512	150498717	.	+	0	Parent=comp160406_c0_seq1.mrna1;Target=comp160406_c0_seq1 165 373 +
Chr1	stalkie_big_nohaplotig	CDS	150498945	150499043	.	+	1	Parent=comp160406_c0_seq1.mrna1;Target=comp160406_c0_seq1 374 472 +
Chr1	stalkie_big_nohaplotig	CDS	150499109	150499448	.	+	1	Parent=comp160406_c0_seq1.mrna1;Target=comp160406_c0_seq1 473 812 +
Chr1	gffcl	locus	150532258	150532389	.	+	.	ID=RLOC_00012446;geneIDs=comp153046_c0_seq1.path2;transcripts=comp153046_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	150532258	150532389	.	+	.	ID=comp153046_c0_seq1.mrna2;geneID=comp153046_c0_seq1.path2;Name=comp153046_c0_seq1;Dir=indeterminatecoverage=24.4;identity=87.9;matches=116;mismatches=5;indels=11;unknowns=0;Target=comp153046_c0_seq1 496 376 .;locus=RLOC_00012446
Chr1	stalkie_big_nohaplotig	exon	150532258	150532389	87	+	.	Parent=comp153046_c0_seq1.mrna2
Chr1	gffcl	locus	150534971	150535651	.	+	.	ID=RLOC_00012447;geneIDs=comp163200_c0_seq1.path1;transcripts=comp163200_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150534971	150535651	.	+	.	ID=comp163200_c0_seq1.mrna1;geneID=comp163200_c0_seq1.path1;Name=comp163200_c0_seq1;Dir=indeterminatecoverage=100.0;identity=89.3;matches=609;mismatches=58;indels=15;unknowns=0;Target=comp163200_c0_seq1 668 1 .;CDS_Target=comp163200_c0_seq1 590 510 .;locus=RLOC_00012447
Chr1	stalkie_big_nohaplotig	exon	150534971	150535651	89	+	.	Parent=comp163200_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150535491	150535573	.	+	0	Parent=comp163200_c0_seq1.mrna1
Chr1	gffcl	locus	150535703	150536108	.	-	.	ID=RLOC_00012448;geneIDs=comp143582_c0_seq1.path1;transcripts=comp143582_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150535703	150536108	.	-	.	ID=comp143582_c0_seq1.mrna1;geneID=comp143582_c0_seq1.path1;Name=comp143582_c0_seq1;Dir=indeterminatecoverage=50.2;identity=98.3;matches=399;mismatches=7;indels=0;unknowns=0;Target=comp143582_c0_seq1 804 399 .;CDS_Target=comp143582_c0_seq1 434 399 .;locus=RLOC_00012448
Chr1	stalkie_big_nohaplotig	exon	150535703	150536108	98	-	.	Parent=comp143582_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150536073	150536108	.	-	0	Parent=comp143582_c0_seq1.mrna1
Chr1	gffcl	locus	150536417	150536755	.	+	.	ID=RLOC_00012449;geneIDs=comp1200866_c0_seq1.path1;transcripts=comp1200866_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150536417	150536755	.	+	.	ID=comp1200866_c0_seq1.mrna1;geneID=comp1200866_c0_seq1.path1;Name=comp1200866_c0_seq1;Dir=indeterminatecoverage=94.7;identity=99.7;matches=338;mismatches=1;indels=0;unknowns=0;Target=comp1200866_c0_seq1 358 20 .;CDS_Target=comp1200866_c0_seq1 350 231 .;locus=RLOC_00012449
Chr1	stalkie_big_nohaplotig	exon	150536417	150536755	99	+	.	Parent=comp1200866_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150536628	150536747	.	+	0	Parent=comp1200866_c0_seq1.mrna1
Chr1	gffcl	locus	150546725	150549041	.	+	.	ID=RLOC_00012450;geneIDs=ORF773.path1,comp161660_c0_seq1.path1;transcripts=comp161660_c0_seq1.mrna1,ORF773.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150546725	150549041	.	+	.	ID=comp161660_c0_seq1.mrna1;geneID=comp161660_c0_seq1.path1;Name=comp161660_c0_seq1;Dir=antisensecoverage=100.0;identity=98.4;matches=1808;mismatches=30;indels=0;unknowns=0;locus=RLOC_00012450
Chr1	stalkie_big_nohaplotig	exon	150546725	150547157	98	+	.	Parent=comp161660_c0_seq1.mrna1;Target=comp161660_c0_seq1 1406 1838 -
Chr1	stalkie_big_nohaplotig	exon	150547229	150547414	98	+	.	Parent=comp161660_c0_seq1.mrna1;Target=comp161660_c0_seq1 1220 1405 -
Chr1	stalkie_big_nohaplotig	exon	150547823	150549041	98	+	.	Parent=comp161660_c0_seq1.mrna1;Target=comp161660_c0_seq1 1 1219 -
Chr1	stalkie_big_nohaplotig	CDS	150547007	150547157	.	+	0	Parent=comp161660_c0_seq1.mrna1;Target=comp161660_c0_seq1 1406 1556 .
Chr1	stalkie_big_nohaplotig	CDS	150547229	150547414	.	+	2	Parent=comp161660_c0_seq1.mrna1;Target=comp161660_c0_seq1 1220 1405 .
Chr1	stalkie_big_nohaplotig	CDS	150547823	150548928	.	+	2	Parent=comp161660_c0_seq1.mrna1;Target=comp161660_c0_seq1 114 1219 .
Chr1	stalkie_big_nohaplotig	mRNA	150547004	150548925	.	+	.	ID=ORF773.mrna1;geneID=ORF773.path1;Name=ORF773;Dir=indeterminatecoverage=100.0;identity=97.6;matches=1409;mismatches=34;indels=0;unknowns=0;locus=RLOC_00012450
Chr1	stalkie_big_nohaplotig	exon	150547004	150547161	96	+	.	Parent=ORF773.mrna1;Target=ORF773 158 1 .
Chr1	stalkie_big_nohaplotig	exon	150547437	150547618	95	+	.	Parent=ORF773.mrna1;Target=ORF773 340 159 .
Chr1	stalkie_big_nohaplotig	exon	150547823	150548925	98	+	.	Parent=ORF773.mrna1;Target=ORF773 1443 341 .
Chr1	stalkie_big_nohaplotig	CDS	150547004	150547161	.	+	0	Parent=ORF773.mrna1;Target=ORF773 158 1 .
Chr1	stalkie_big_nohaplotig	CDS	150547437	150547618	.	+	1	Parent=ORF773.mrna1;Target=ORF773 340 159 .
Chr1	stalkie_big_nohaplotig	CDS	150547823	150548925	.	+	2	Parent=ORF773.mrna1;Target=ORF773 1443 341 .
Chr1	gffcl	locus	150551020	150552087	.	-	.	ID=RLOC_00012451;geneIDs=comp152283_c0_seq1.path1;transcripts=comp152283_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150551020	150552087	.	-	.	ID=comp152283_c0_seq1.mrna1;geneID=comp152283_c0_seq1.path1;Name=comp152283_c0_seq1;Dir=antisensecoverage=100.0;identity=97.6;matches=822;mismatches=6;indels=14;unknowns=0;locus=RLOC_00012451
Chr1	stalkie_big_nohaplotig	exon	150551020	150551484	96	-	.	Parent=comp152283_c0_seq1.mrna1;Target=comp152283_c0_seq1 1 479 -
Chr1	stalkie_big_nohaplotig	exon	150551537	150551582	100	-	.	Parent=comp152283_c0_seq1.mrna1;Target=comp152283_c0_seq1 480 525 -
Chr1	stalkie_big_nohaplotig	exon	150551636	150551726	100	-	.	Parent=comp152283_c0_seq1.mrna1;Target=comp152283_c0_seq1 526 616 -
Chr1	stalkie_big_nohaplotig	exon	150551800	150551926	96	-	.	Parent=comp152283_c0_seq1.mrna1;Target=comp152283_c0_seq1 617 743 -
Chr1	stalkie_big_nohaplotig	exon	150551989	150552087	100	-	.	Parent=comp152283_c0_seq1.mrna1;Target=comp152283_c0_seq1 744 842 -
Chr1	stalkie_big_nohaplotig	CDS	150551320	150551484	.	-	0	Parent=comp152283_c0_seq1.mrna1;Target=comp152283_c0_seq1 315 479 .
Chr1	stalkie_big_nohaplotig	CDS	150551537	150551582	.	-	1	Parent=comp152283_c0_seq1.mrna1;Target=comp152283_c0_seq1 480 525 .
Chr1	stalkie_big_nohaplotig	CDS	150551636	150551697	.	-	0	Parent=comp152283_c0_seq1.mrna1;Target=comp152283_c0_seq1 526 587 .
Chr1	gffcl	locus	150558678	150559994	.	-	.	ID=RLOC_00012452;geneIDs=FBgn0027066.6.path1;transcripts=FBgn0027066.6.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150558678	150559994	.	-	.	ID=FBgn0027066.6.mrna1;geneID=FBgn0027066.6.path1;Name=FBgn0027066.6;Dir=sensecoverage=100.0;identity=98.7;matches=1246;mismatches=17;indels=0;unknowns=0;locus=RLOC_00012452
Chr1	stalkie_big_nohaplotig	exon	150558678	150559075	99	-	.	Parent=FBgn0027066.6.mrna1;Target=FBgn0027066.6 866 1263 +
Chr1	stalkie_big_nohaplotig	exon	150559130	150559994	98	-	.	Parent=FBgn0027066.6.mrna1;Target=FBgn0027066.6 1 865 +
Chr1	stalkie_big_nohaplotig	CDS	150558678	150559075	.	-	2	Parent=FBgn0027066.6.mrna1;Target=FBgn0027066.6 866 1263 +
Chr1	stalkie_big_nohaplotig	CDS	150559130	150559994	.	-	0	Parent=FBgn0027066.6.mrna1;Target=FBgn0027066.6 1 865 +
Chr1	gffcl	locus	150576601	150578424	.	-	.	ID=RLOC_00012453;geneIDs=comp152950_c0_seq1.path1;transcripts=comp152950_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150576601	150578424	.	-	.	ID=comp152950_c0_seq1.mrna1;geneID=comp152950_c0_seq1.path1;Name=comp152950_c0_seq1;Dir=indeterminatecoverage=96.8;identity=98.8;matches=1026;mismatches=12;indels=0;unknowns=1;Target=comp152950_c0_seq1 804 151 .;locus=RLOC_00012453
Chr1	stalkie_big_nohaplotig	exon	150576601	150576852	100	-	.	Parent=comp152950_c0_seq1.mrna1;Target=comp152950_c0_seq1 1058 807 .
Chr1	stalkie_big_nohaplotig	exon	150577638	150578424	98	-	.	Parent=comp152950_c0_seq1.mrna1;Target=comp152950_c0_seq1 806 20 .
Chr1	stalkie_big_nohaplotig	CDS	150577640	150578293	.	-	0	Parent=comp152950_c0_seq1.mrna1
Chr1	gffcl	locus	150585585	150590079	.	-	.	ID=RLOC_00012454;geneIDs=FBgn0035750.2.path1,FBgn0035750.3.path1,comp157504_c0_seq1.path1;transcripts=FBgn0035750.3.mrna1,comp157504_c0_seq1.mrna1,FBgn0035750.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150585585	150589971	.	-	.	ID=FBgn0035750.3.mrna1;geneID=FBgn0035750.3.path1;Name=FBgn0035750.3;Dir=sensecoverage=99.9;identity=99.1;matches=665;mismatches=6;indels=0;unknowns=0;locus=RLOC_00012454
Chr1	stalkie_big_nohaplotig	exon	150585585	150585713	96	-	.	Parent=FBgn0035750.3.mrna1;Target=FBgn0035750.3 543 671 +
Chr1	stalkie_big_nohaplotig	exon	150585790	150586145	99	-	.	Parent=FBgn0035750.3.mrna1;Target=FBgn0035750.3 187 542 +
Chr1	stalkie_big_nohaplotig	exon	150589786	150589971	99	-	.	Parent=FBgn0035750.3.mrna1;Target=FBgn0035750.3 1 186 +
Chr1	stalkie_big_nohaplotig	CDS	150585587	150585713	.	-	1	Parent=FBgn0035750.3.mrna1;Target=FBgn0035750.3 543 669 +
Chr1	stalkie_big_nohaplotig	CDS	150585790	150586145	.	-	0	Parent=FBgn0035750.3.mrna1;Target=FBgn0035750.3 187 542 +
Chr1	stalkie_big_nohaplotig	CDS	150589786	150589941	.	-	0	Parent=FBgn0035750.3.mrna1;Target=FBgn0035750.3 31 186 +
Chr1	stalkie_big_nohaplotig	mRNA	150588708	150590079	.	-	.	ID=comp157504_c0_seq1.mrna1;geneID=comp157504_c0_seq1.path1;Name=comp157504_c0_seq1;Dir=antisensecoverage=100.0;identity=99.0;matches=1043;mismatches=11;indels=0;unknowns=0;locus=RLOC_00012454
Chr1	stalkie_big_nohaplotig	exon	150588708	150589467	98	-	.	Parent=comp157504_c0_seq1.mrna1;Target=comp157504_c0_seq1 1 760 -
Chr1	stalkie_big_nohaplotig	exon	150589786	150590079	99	-	.	Parent=comp157504_c0_seq1.mrna1;Target=comp157504_c0_seq1 761 1054 -
Chr1	stalkie_big_nohaplotig	CDS	150589108	150589467	.	-	0	Parent=comp157504_c0_seq1.mrna1;Target=comp157504_c0_seq1 401 760 .
Chr1	stalkie_big_nohaplotig	CDS	150589786	150589941	.	-	0	Parent=comp157504_c0_seq1.mrna1;Target=comp157504_c0_seq1 761 916 .
Chr1	stalkie_big_nohaplotig	mRNA	150588915	150589971	.	-	.	ID=FBgn0035750.2.mrna1;geneID=FBgn0035750.2.path1;Name=FBgn0035750.2;Dir=sensecoverage=100.0;identity=99.6;matches=672;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012454
Chr1	stalkie_big_nohaplotig	exon	150588915	150589047	100	-	.	Parent=FBgn0035750.2.mrna1;Target=FBgn0035750.2 543 675 +
Chr1	stalkie_big_nohaplotig	exon	150589112	150589467	99	-	.	Parent=FBgn0035750.2.mrna1;Target=FBgn0035750.2 187 542 +
Chr1	stalkie_big_nohaplotig	exon	150589786	150589971	99	-	.	Parent=FBgn0035750.2.mrna1;Target=FBgn0035750.2 1 186 +
Chr1	stalkie_big_nohaplotig	CDS	150588915	150589047	.	-	1	Parent=FBgn0035750.2.mrna1;Target=FBgn0035750.2 543 675 +
Chr1	stalkie_big_nohaplotig	CDS	150589112	150589467	.	-	0	Parent=FBgn0035750.2.mrna1;Target=FBgn0035750.2 187 542 +
Chr1	stalkie_big_nohaplotig	CDS	150589786	150589941	.	-	0	Parent=FBgn0035750.2.mrna1;Target=FBgn0035750.2 31 186 +
Chr1	gffcl	locus	150617609	150618235	.	-	.	ID=RLOC_00012455;geneIDs=FBgn0052371.5.path1;transcripts=FBgn0052371.5.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150617609	150618235	.	-	.	ID=FBgn0052371.5.mrna1;geneID=FBgn0052371.5.path1;Name=FBgn0052371.5;Dir=indeterminatecoverage=100.0;identity=98.4;matches=617;mismatches=10;indels=0;unknowns=0;Target=FBgn0052371.5 627 1 .;locus=RLOC_00012455
Chr1	stalkie_big_nohaplotig	exon	150617609	150618235	98	-	.	Parent=FBgn0052371.5.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150617609	150618235	.	-	0	Parent=FBgn0052371.5.mrna1
Chr1	gffcl	locus	150618599	150621470	.	-	.	ID=RLOC_00012456;geneIDs=comp161867_c0_seq1.path1;transcripts=comp161867_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150618599	150621470	.	-	.	ID=comp161867_c0_seq1.mrna1;geneID=comp161867_c0_seq1.path1;Name=comp161867_c0_seq1;Dir=sensecoverage=100.0;identity=97.8;matches=2710;mismatches=53;indels=7;unknowns=0;Target=comp161867_c0_seq1 155 709 +;locus=RLOC_00012456
Chr1	stalkie_big_nohaplotig	exon	150618599	150620355	96	-	.	Parent=comp161867_c0_seq1.mrna1;Target=comp161867_c0_seq1 1009 2768 +
Chr1	stalkie_big_nohaplotig	exon	150620413	150620586	100	-	.	Parent=comp161867_c0_seq1.mrna1;Target=comp161867_c0_seq1 835 1008 +
Chr1	stalkie_big_nohaplotig	exon	150620637	150621470	99	-	.	Parent=comp161867_c0_seq1.mrna1;Target=comp161867_c0_seq1 1 834 +
Chr1	stalkie_big_nohaplotig	CDS	150620762	150621316	.	-	0	Parent=comp161867_c0_seq1.mrna1
Chr1	gffcl	locus	150644456	150644973	.	-	.	ID=RLOC_00012457;geneIDs=comp138573_c1_seq1.path1;transcripts=comp138573_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150644456	150644973	.	-	.	ID=comp138573_c1_seq1.mrna1;geneID=comp138573_c1_seq1.path1;Name=comp138573_c1_seq1;Dir=indeterminatecoverage=97.2;identity=99.2;matches=514;mismatches=4;indels=0;unknowns=0;Target=comp138573_c1_seq1 533 16 .;CDS_Target=comp138573_c1_seq1 99 16 .;locus=RLOC_00012457
Chr1	stalkie_big_nohaplotig	exon	150644456	150644973	99	-	.	Parent=comp138573_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150644890	150644973	.	-	0	Parent=comp138573_c1_seq1.mrna1
Chr1	gffcl	locus	150647473	150649571	.	+	.	ID=RLOC_00012458;geneIDs=comp153497_c0_seq1.path1,comp157886_c0_seq1.path1;transcripts=comp157886_c0_seq1.mrna1,comp153497_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150647473	150647873	.	+	.	ID=comp157886_c0_seq1.mrna1;geneID=comp157886_c0_seq1.path1;Name=comp157886_c0_seq1;Dir=indeterminatecoverage=94.6;identity=96.3;matches=386;mismatches=15;indels=0;unknowns=0;Target=comp157886_c0_seq1 424 24 .;CDS_Target=comp157886_c0_seq1 180 151 .;locus=RLOC_00012458
Chr1	stalkie_big_nohaplotig	exon	150647473	150647873	96	+	.	Parent=comp157886_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150647600	150647629	.	+	0	Parent=comp157886_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150647682	150649571	.	+	.	ID=comp153497_c0_seq1.mrna1;geneID=comp153497_c0_seq1.path1;Name=comp153497_c0_seq1;Dir=antisensecoverage=100.0;identity=97.3;matches=603;mismatches=10;indels=7;unknowns=0;Target=comp153497_c0_seq1 376 483 .;locus=RLOC_00012458
Chr1	stalkie_big_nohaplotig	exon	150647682	150647726	100	+	.	Parent=comp153497_c0_seq1.mrna1;Target=comp153497_c0_seq1 574 618 -
Chr1	stalkie_big_nohaplotig	exon	150648907	150649455	96	+	.	Parent=comp153497_c0_seq1.mrna1;Target=comp153497_c0_seq1 22 573 -
Chr1	stalkie_big_nohaplotig	exon	150649551	150649571	100	+	.	Parent=comp153497_c0_seq1.mrna1;Target=comp153497_c0_seq1 1 21 -
Chr1	stalkie_big_nohaplotig	CDS	150648997	150649104	.	+	0	Parent=comp153497_c0_seq1.mrna1
Chr1	gffcl	locus	150659553	150660420	.	-	.	ID=RLOC_00012459;geneIDs=comp144429_c0_seq1.path1;transcripts=comp144429_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150659553	150660420	.	-	.	ID=comp144429_c0_seq1.mrna1;geneID=comp144429_c0_seq1.path1;Name=comp144429_c0_seq1;Dir=sensecoverage=99.5;identity=96.7;matches=408;mismatches=12;indels=2;unknowns=0;locus=RLOC_00012459
Chr1	stalkie_big_nohaplotig	exon	150659553	150659950	96	-	.	Parent=comp144429_c0_seq1.mrna1;Target=comp144429_c0_seq1 23 422 +
Chr1	stalkie_big_nohaplotig	exon	150660399	150660420	100	-	.	Parent=comp144429_c0_seq1.mrna1;Target=comp144429_c0_seq1 1 22 +
Chr1	stalkie_big_nohaplotig	CDS	150659806	150659950	.	-	1	Parent=comp144429_c0_seq1.mrna1;Target=comp144429_c0_seq1 23 167 +
Chr1	stalkie_big_nohaplotig	CDS	150660399	150660418	.	-	0	Parent=comp144429_c0_seq1.mrna1;Target=comp144429_c0_seq1 3 22 +
Chr1	gffcl	locus	150661471	150662628	.	-	.	ID=RLOC_00012460;geneIDs=comp156065_c0_seq1.path1;transcripts=comp156065_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150661471	150662628	.	-	.	ID=comp156065_c0_seq1.mrna1;geneID=comp156065_c0_seq1.path1;Name=comp156065_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=1141;mismatches=15;indels=2;unknowns=0;Target=comp156065_c0_seq1 1156 1 .;CDS_Target=comp156065_c0_seq1 529 422 .;locus=RLOC_00012460
Chr1	stalkie_big_nohaplotig	exon	150661471	150662628	98	-	.	Parent=comp156065_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150662098	150662205	.	-	0	Parent=comp156065_c0_seq1.mrna1
Chr1	gffcl	locus	150662883	150663316	.	-	.	ID=RLOC_00012461;geneIDs=comp134958_c0_seq1.path1;transcripts=comp134958_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150662883	150663316	.	-	.	ID=comp134958_c0_seq1.mrna1;geneID=comp134958_c0_seq1.path1;Name=comp134958_c0_seq1;Dir=indeterminatecoverage=96.7;identity=96.8;matches=420;mismatches=14;indels=0;unknowns=0;Target=comp134958_c0_seq1 449 16 .;CDS_Target=comp134958_c0_seq1 329 147 .;locus=RLOC_00012461
Chr1	stalkie_big_nohaplotig	exon	150662883	150663316	96	-	.	Parent=comp134958_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150663003	150663185	.	-	0	Parent=comp134958_c0_seq1.mrna1
Chr1	gffcl	locus	150663349	150663678	.	+	.	ID=RLOC_00012462;geneIDs=comp671589_c0_seq1.path1;transcripts=comp671589_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150663349	150663678	.	+	.	ID=comp671589_c0_seq1.mrna1;geneID=comp671589_c0_seq1.path1;Name=comp671589_c0_seq1;Dir=indeterminatecoverage=85.5;identity=96.7;matches=320;mismatches=9;indels=2;unknowns=0;Target=comp671589_c0_seq1 335 6 .;CDS_Target=comp671589_c0_seq1 242 210 .;locus=RLOC_00012462
Chr1	stalkie_big_nohaplotig	exon	150663349	150663678	96	+	.	Parent=comp671589_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150663553	150663585	.	+	0	Parent=comp671589_c0_seq1.mrna1
Chr1	gffcl	locus	150664276	150665002	.	-	.	ID=RLOC_00012463;geneIDs=FBgn0027066.9.path1;transcripts=FBgn0027066.9.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150664276	150665002	.	-	.	ID=FBgn0027066.9.mrna1;geneID=FBgn0027066.9.path1;Name=FBgn0027066.9;Dir=indeterminatecoverage=99.7;identity=98.9;matches=719;mismatches=8;indels=0;unknowns=0;Target=FBgn0027066.9 727 1 .;CDS_Target=FBgn0027066.9 726 55 .;locus=RLOC_00012463
Chr1	stalkie_big_nohaplotig	exon	150664276	150665002	98	-	.	Parent=FBgn0027066.9.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150664277	150664948	.	-	0	Parent=FBgn0027066.9.mrna1
Chr1	gffcl	locus	150673897	150674834	.	-	.	ID=RLOC_00012464;geneIDs=comp148837_c0_seq1.path1;transcripts=comp148837_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150673897	150674834	.	-	.	ID=comp148837_c0_seq1.mrna1;geneID=comp148837_c0_seq1.path1;Name=comp148837_c0_seq1;Dir=sensecoverage=97.4;identity=95.4;matches=746;mismatches=6;indels=30;unknowns=0;locus=RLOC_00012464
Chr1	stalkie_big_nohaplotig	exon	150673897	150674555	94	-	.	Parent=comp148837_c0_seq1.mrna1;Target=comp148837_c0_seq1 144 772 +
Chr1	stalkie_big_nohaplotig	exon	150674628	150674680	100	-	.	Parent=comp148837_c0_seq1.mrna1;Target=comp148837_c0_seq1 91 143 +
Chr1	stalkie_big_nohaplotig	exon	150674765	150674834	100	-	.	Parent=comp148837_c0_seq1.mrna1;Target=comp148837_c0_seq1 21 90 +
Chr1	stalkie_big_nohaplotig	CDS	150674255	150674555	.	-	1	Parent=comp148837_c0_seq1.mrna1;Target=comp148837_c0_seq1 144 414 +
Chr1	stalkie_big_nohaplotig	CDS	150674628	150674680	.	-	0	Parent=comp148837_c0_seq1.mrna1;Target=comp148837_c0_seq1 91 143 +
Chr1	stalkie_big_nohaplotig	CDS	150674765	150674833	.	-	0	Parent=comp148837_c0_seq1.mrna1;Target=comp148837_c0_seq1 22 90 +
Chr1	gffcl	locus	150704331	150705020	.	+	.	ID=RLOC_00012465;geneIDs=FBgn0053057.2.path1;transcripts=FBgn0053057.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150704331	150705020	.	+	.	ID=FBgn0053057.2.mrna1;geneID=FBgn0053057.2.path1;Name=FBgn0053057.2;Dir=indeterminatecoverage=100.0;identity=99.3;matches=685;mismatches=5;indels=0;unknowns=0;Target=FBgn0053057.2 690 1 .;locus=RLOC_00012465
Chr1	stalkie_big_nohaplotig	exon	150704331	150705020	99	+	.	Parent=FBgn0053057.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150704331	150705020	.	+	0	Parent=FBgn0053057.2.mrna1
Chr1	gffcl	locus	150717715	150719961	.	-	.	ID=RLOC_00012466;geneIDs=FBgn0027066.8.path1,comp162559_c0_seq1.path1;transcripts=comp162559_c0_seq1.mrna1,FBgn0027066.8.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150717715	150719961	.	-	.	ID=comp162559_c0_seq1.mrna1;geneID=comp162559_c0_seq1.path1;Name=comp162559_c0_seq1;Dir=sensecoverage=97.8;identity=98.1;matches=1460;mismatches=28;indels=0;unknowns=0;locus=RLOC_00012466
Chr1	stalkie_big_nohaplotig	exon	150717715	150717862	97	-	.	Parent=comp162559_c0_seq1.mrna1;Target=comp162559_c0_seq1 1375 1522 +
Chr1	stalkie_big_nohaplotig	exon	150717944	150718052	98	-	.	Parent=comp162559_c0_seq1.mrna1;Target=comp162559_c0_seq1 1266 1374 +
Chr1	stalkie_big_nohaplotig	exon	150718335	150718892	97	-	.	Parent=comp162559_c0_seq1.mrna1;Target=comp162559_c0_seq1 708 1265 +
Chr1	stalkie_big_nohaplotig	exon	150719289	150719961	98	-	.	Parent=comp162559_c0_seq1.mrna1;Target=comp162559_c0_seq1 35 707 +
Chr1	stalkie_big_nohaplotig	CDS	150718419	150718892	.	-	0	Parent=comp162559_c0_seq1.mrna1;Target=comp162559_c0_seq1 708 1181 +
Chr1	stalkie_big_nohaplotig	CDS	150719289	150719867	.	-	0	Parent=comp162559_c0_seq1.mrna1;Target=comp162559_c0_seq1 129 707 +
Chr1	stalkie_big_nohaplotig	mRNA	150719103	150719888	.	-	.	ID=FBgn0027066.8.mrna1;geneID=FBgn0027066.8.path1;Name=FBgn0027066.8;Dir=indeterminatecoverage=100.0;identity=98.3;matches=773;mismatches=13;indels=0;unknowns=0;Target=FBgn0027066.8 786 1 .;locus=RLOC_00012466
Chr1	stalkie_big_nohaplotig	exon	150719103	150719888	98	-	.	Parent=FBgn0027066.8.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150719103	150719888	.	-	0	Parent=FBgn0027066.8.mrna1
Chr1	gffcl	locus	150721017	150723844	.	-	.	ID=RLOC_00012467;geneIDs=comp156709_c2_seq1.path1;transcripts=comp156709_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150721017	150723844	.	-	.	ID=comp156709_c2_seq1.mrna1;geneID=comp156709_c2_seq1.path1;Name=comp156709_c2_seq1;Dir=indeterminatecoverage=99.9;identity=95.1;matches=1620;mismatches=47;indels=36;unknowns=0;Target=comp156709_c2_seq1 350 174 .;locus=RLOC_00012467
Chr1	stalkie_big_nohaplotig	exon	150721017	150721605	93	-	.	Parent=comp156709_c2_seq1.mrna1;Target=comp156709_c2_seq1 1670 1108 .
Chr1	stalkie_big_nohaplotig	exon	150721671	150721920	98	-	.	Parent=comp156709_c2_seq1.mrna1;Target=comp156709_c2_seq1 1107 858 .
Chr1	stalkie_big_nohaplotig	exon	150722212	150722471	95	-	.	Parent=comp156709_c2_seq1.mrna1;Target=comp156709_c2_seq1 857 598 .
Chr1	stalkie_big_nohaplotig	exon	150723183	150723680	95	-	.	Parent=comp156709_c2_seq1.mrna1;Target=comp156709_c2_seq1 597 106 .
Chr1	stalkie_big_nohaplotig	exon	150723741	150723844	91	-	.	Parent=comp156709_c2_seq1.mrna1;Target=comp156709_c2_seq1 105 2 .
Chr1	stalkie_big_nohaplotig	CDS	150723436	150723612	.	-	0	Parent=comp156709_c2_seq1.mrna1
Chr1	gffcl	locus	150727233	150763855	.	+	.	ID=RLOC_00012468;geneIDs=FBgn0038076.4.path1,comp163218_c0_seq1.path1;transcripts=comp163218_c0_seq1.mrna1,FBgn0038076.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150727233	150763855	.	+	.	ID=comp163218_c0_seq1.mrna1;geneID=comp163218_c0_seq1.path1;Name=comp163218_c0_seq1;Dir=antisensecoverage=99.8;identity=99.2;matches=2372;mismatches=18;indels=1;unknowns=0;locus=RLOC_00012468
Chr1	stalkie_big_nohaplotig	exon	150727233	150727772	97	+	.	Parent=comp163218_c0_seq1.mrna1;Target=comp163218_c0_seq1 1852 2390 -
Chr1	stalkie_big_nohaplotig	exon	150736134	150736166	100	+	.	Parent=comp163218_c0_seq1.mrna1;Target=comp163218_c0_seq1 1819 1851 -
Chr1	stalkie_big_nohaplotig	exon	150755295	150755452	100	+	.	Parent=comp163218_c0_seq1.mrna1;Target=comp163218_c0_seq1 1661 1818 -
Chr1	stalkie_big_nohaplotig	exon	150755508	150755711	99	+	.	Parent=comp163218_c0_seq1.mrna1;Target=comp163218_c0_seq1 1457 1660 -
Chr1	stalkie_big_nohaplotig	exon	150755777	150756275	99	+	.	Parent=comp163218_c0_seq1.mrna1;Target=comp163218_c0_seq1 958 1456 -
Chr1	stalkie_big_nohaplotig	exon	150756331	150757017	100	+	.	Parent=comp163218_c0_seq1.mrna1;Target=comp163218_c0_seq1 271 957 -
Chr1	stalkie_big_nohaplotig	exon	150757076	150757097	100	+	.	Parent=comp163218_c0_seq1.mrna1;Target=comp163218_c0_seq1 249 270 -
Chr1	stalkie_big_nohaplotig	exon	150763608	150763855	98	+	.	Parent=comp163218_c0_seq1.mrna1;Target=comp163218_c0_seq1 1 248 -
Chr1	stalkie_big_nohaplotig	CDS	150736150	150736166	.	+	0	Parent=comp163218_c0_seq1.mrna1;Target=comp163218_c0_seq1 1819 1835 .
Chr1	stalkie_big_nohaplotig	CDS	150755295	150755452	.	+	1	Parent=comp163218_c0_seq1.mrna1;Target=comp163218_c0_seq1 1661 1818 .
Chr1	stalkie_big_nohaplotig	CDS	150755508	150755711	.	+	2	Parent=comp163218_c0_seq1.mrna1;Target=comp163218_c0_seq1 1457 1660 .
Chr1	stalkie_big_nohaplotig	CDS	150755777	150755997	.	+	2	Parent=comp163218_c0_seq1.mrna1;Target=comp163218_c0_seq1 1236 1456 .
Chr1	stalkie_big_nohaplotig	mRNA	150727723	150757248	.	+	.	ID=FBgn0038076.4.mrna1;geneID=FBgn0038076.4.path1;Name=FBgn0038076.4;Dir=sensecoverage=100.0;identity=98.0;matches=1594;mismatches=32;indels=0;unknowns=0;locus=RLOC_00012468
Chr1	stalkie_big_nohaplotig	exon	150727723	150727772	96	+	.	Parent=FBgn0038076.4.mrna1;Target=FBgn0038076.4 1 50 +
Chr1	stalkie_big_nohaplotig	exon	150736134	150736166	100	+	.	Parent=FBgn0038076.4.mrna1;Target=FBgn0038076.4 51 83 +
Chr1	stalkie_big_nohaplotig	exon	150755295	150755452	100	+	.	Parent=FBgn0038076.4.mrna1;Target=FBgn0038076.4 84 241 +
Chr1	stalkie_big_nohaplotig	exon	150755508	150755711	99	+	.	Parent=FBgn0038076.4.mrna1;Target=FBgn0038076.4 242 445 +
Chr1	stalkie_big_nohaplotig	exon	150755777	150755962	98	+	.	Parent=FBgn0038076.4.mrna1;Target=FBgn0038076.4 446 631 +
Chr1	stalkie_big_nohaplotig	exon	150756031	150756086	98	+	.	Parent=FBgn0038076.4.mrna1;Target=FBgn0038076.4 632 687 +
Chr1	stalkie_big_nohaplotig	exon	150756144	150756275	100	+	.	Parent=FBgn0038076.4.mrna1;Target=FBgn0038076.4 688 819 +
Chr1	stalkie_big_nohaplotig	exon	150756331	150756543	100	+	.	Parent=FBgn0038076.4.mrna1;Target=FBgn0038076.4 820 1032 +
Chr1	stalkie_big_nohaplotig	exon	150756597	150757017	100	+	.	Parent=FBgn0038076.4.mrna1;Target=FBgn0038076.4 1033 1453 +
Chr1	stalkie_big_nohaplotig	exon	150757076	150757248	84	+	.	Parent=FBgn0038076.4.mrna1;Target=FBgn0038076.4 1454 1626 +
Chr1	stalkie_big_nohaplotig	CDS	150736150	150736166	.	+	0	Parent=FBgn0038076.4.mrna1;Target=FBgn0038076.4 67 83 +
Chr1	stalkie_big_nohaplotig	CDS	150755295	150755452	.	+	1	Parent=FBgn0038076.4.mrna1;Target=FBgn0038076.4 84 241 +
Chr1	stalkie_big_nohaplotig	CDS	150755508	150755711	.	+	2	Parent=FBgn0038076.4.mrna1;Target=FBgn0038076.4 242 445 +
Chr1	stalkie_big_nohaplotig	CDS	150755777	150755962	.	+	2	Parent=FBgn0038076.4.mrna1;Target=FBgn0038076.4 446 631 +
Chr1	stalkie_big_nohaplotig	CDS	150756031	150756086	.	+	2	Parent=FBgn0038076.4.mrna1;Target=FBgn0038076.4 632 687 +
Chr1	stalkie_big_nohaplotig	CDS	150756144	150756275	.	+	0	Parent=FBgn0038076.4.mrna1;Target=FBgn0038076.4 688 819 +
Chr1	stalkie_big_nohaplotig	CDS	150756331	150756543	.	+	0	Parent=FBgn0038076.4.mrna1;Target=FBgn0038076.4 820 1032 +
Chr1	stalkie_big_nohaplotig	CDS	150756597	150757017	.	+	0	Parent=FBgn0038076.4.mrna1;Target=FBgn0038076.4 1033 1453 +
Chr1	stalkie_big_nohaplotig	CDS	150757076	150757248	.	+	2	Parent=FBgn0038076.4.mrna1;Target=FBgn0038076.4 1454 1626 +
Chr1	gffcl	locus	150736236	150736540	.	+	.	ID=RLOC_00012469;geneIDs=comp145505_c0_seq1.path1;transcripts=comp145505_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150736236	150736540	.	+	.	ID=comp145505_c0_seq1.mrna1;geneID=comp145505_c0_seq1.path1;Name=comp145505_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=245;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012469
Chr1	stalkie_big_nohaplotig	exon	150736236	150736324	100	+	.	Parent=comp145505_c0_seq1.mrna1;Target=comp145505_c0_seq1 1 89 +
Chr1	stalkie_big_nohaplotig	exon	150736385	150736540	100	+	.	Parent=comp145505_c0_seq1.mrna1;Target=comp145505_c0_seq1 90 245 +
Chr1	stalkie_big_nohaplotig	CDS	150736237	150736324	.	+	0	Parent=comp145505_c0_seq1.mrna1;Target=comp145505_c0_seq1 2 89 +
Chr1	stalkie_big_nohaplotig	CDS	150736385	150736539	.	+	2	Parent=comp145505_c0_seq1.mrna1;Target=comp145505_c0_seq1 90 244 +
Chr1	gffcl	locus	150752776	150753682	.	+	.	ID=RLOC_00012470;geneIDs=comp131001_c1_seq1.path1;transcripts=comp131001_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150752776	150753682	.	+	.	ID=comp131001_c1_seq1.mrna1;geneID=comp131001_c1_seq1.path1;Name=comp131001_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=902;mismatches=1;indels=4;unknowns=0;Target=comp131001_c1_seq1 903 1 .;CDS_Target=comp131001_c1_seq1 406 275 .;locus=RLOC_00012470
Chr1	stalkie_big_nohaplotig	exon	150752776	150753682	99	+	.	Parent=comp131001_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150753050	150753181	.	+	0	Parent=comp131001_c1_seq1.mrna1
Chr1	gffcl	locus	150761801	150762306	.	+	.	ID=RLOC_00012471;geneIDs=comp150693_c0_seq1.path1;transcripts=comp150693_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150761801	150762306	.	+	.	ID=comp150693_c0_seq1.mrna1;geneID=comp150693_c0_seq1.path1;Name=comp150693_c0_seq1;Dir=sensecoverage=100.0;identity=99.1;matches=446;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012471
Chr1	stalkie_big_nohaplotig	exon	150761801	150761967	97	+	.	Parent=comp150693_c0_seq1.mrna1;Target=comp150693_c0_seq1 1 167 +
Chr1	stalkie_big_nohaplotig	exon	150762024	150762306	100	+	.	Parent=comp150693_c0_seq1.mrna1;Target=comp150693_c0_seq1 168 450 +
Chr1	stalkie_big_nohaplotig	CDS	150761802	150761967	.	+	0	Parent=comp150693_c0_seq1.mrna1;Target=comp150693_c0_seq1 2 167 +
Chr1	stalkie_big_nohaplotig	CDS	150762024	150762244	.	+	2	Parent=comp150693_c0_seq1.mrna1;Target=comp150693_c0_seq1 168 388 +
Chr1	gffcl	locus	150779768	150780399	.	+	.	ID=RLOC_00012473;geneIDs=comp150596_c0_seq1.path1;transcripts=comp150596_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150779768	150780399	.	+	.	ID=comp150596_c0_seq1.mrna1;geneID=comp150596_c0_seq1.path1;Name=comp150596_c0_seq1;Dir=antisensecoverage=100.0;identity=98.2;matches=554;mismatches=10;indels=0;unknowns=0;locus=RLOC_00012473
Chr1	stalkie_big_nohaplotig	exon	150779768	150779805	100	+	.	Parent=comp150596_c0_seq1.mrna1;Target=comp150596_c0_seq1 527 564 -
Chr1	stalkie_big_nohaplotig	exon	150779874	150780399	98	+	.	Parent=comp150596_c0_seq1.mrna1;Target=comp150596_c0_seq1 1 526 -
Chr1	stalkie_big_nohaplotig	CDS	150779770	150779805	.	+	0	Parent=comp150596_c0_seq1.mrna1;Target=comp150596_c0_seq1 527 562 .
Chr1	stalkie_big_nohaplotig	CDS	150779874	150780398	.	+	0	Parent=comp150596_c0_seq1.mrna1;Target=comp150596_c0_seq1 2 526 .
Chr1	gffcl	locus	150787012	150788756	.	+	.	ID=RLOC_00012474;geneIDs=comp159451_c0_seq1.path1;transcripts=comp159451_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150787012	150788756	.	+	.	ID=comp159451_c0_seq1.mrna1;geneID=comp159451_c0_seq1.path1;Name=comp159451_c0_seq1;Dir=sensecoverage=99.7;identity=98.4;matches=569;mismatches=8;indels=1;unknowns=0;locus=RLOC_00012474
Chr1	stalkie_big_nohaplotig	exon	150787012	150787102	97	+	.	Parent=comp159451_c0_seq1.mrna1;Target=comp159451_c0_seq1 1 90 +
Chr1	stalkie_big_nohaplotig	exon	150788207	150788324	99	+	.	Parent=comp159451_c0_seq1.mrna1;Target=comp159451_c0_seq1 91 208 +
Chr1	stalkie_big_nohaplotig	exon	150788388	150788756	98	+	.	Parent=comp159451_c0_seq1.mrna1;Target=comp159451_c0_seq1 209 577 +
Chr1	stalkie_big_nohaplotig	CDS	150788214	150788324	.	+	0	Parent=comp159451_c0_seq1.mrna1;Target=comp159451_c0_seq1 98 208 +
Chr1	stalkie_big_nohaplotig	CDS	150788388	150788390	.	+	0	Parent=comp159451_c0_seq1.mrna1;Target=comp159451_c0_seq1 209 211 +
Chr1	gffcl	locus	150794416	150796372	.	-	.	ID=RLOC_00012475;geneIDs=comp125062_c0_seq1.path1;transcripts=comp125062_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150794416	150796372	.	-	.	ID=comp125062_c0_seq1.mrna1;geneID=comp125062_c0_seq1.path1;Name=comp125062_c0_seq1;Dir=antisensecoverage=99.3;identity=99.0;matches=1874;mismatches=17;indels=2;unknowns=0;locus=RLOC_00012475
Chr1	stalkie_big_nohaplotig	exon	150794416	150796159	99	-	.	Parent=comp125062_c0_seq1.mrna1;Target=comp125062_c0_seq1 14 1757 -
Chr1	stalkie_big_nohaplotig	exon	150796225	150796372	98	-	.	Parent=comp125062_c0_seq1.mrna1;Target=comp125062_c0_seq1 1758 1905 -
Chr1	stalkie_big_nohaplotig	CDS	150795626	150796159	.	-	0	Parent=comp125062_c0_seq1.mrna1;Target=comp125062_c0_seq1 1224 1757 .
Chr1	stalkie_big_nohaplotig	CDS	150796225	150796230	.	-	0	Parent=comp125062_c0_seq1.mrna1;Target=comp125062_c0_seq1 1758 1763 .
Chr1	gffcl	locus	150805841	150806099	.	+	.	ID=RLOC_00012476;geneIDs=comp86785_c0_seq1.path1;transcripts=comp86785_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150805841	150806099	.	+	.	ID=comp86785_c0_seq1.mrna1;geneID=comp86785_c0_seq1.path1;Name=comp86785_c0_seq1;Dir=indeterminatecoverage=37.6;identity=95.1;matches=251;mismatches=8;indels=5;unknowns=0;Target=comp86785_c0_seq1 297 34 .;CDS_Target=comp86785_c0_seq1 170 126 .;locus=RLOC_00012476
Chr1	stalkie_big_nohaplotig	exon	150805841	150806099	95	+	.	Parent=comp86785_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150805933	150805977	.	+	0	Parent=comp86785_c0_seq1.mrna1
Chr1	gffcl	locus	150833965	150834912	.	-	.	ID=RLOC_00012477;geneIDs=FBgn0027066.4.path1;transcripts=FBgn0027066.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150833965	150834912	.	-	.	ID=FBgn0027066.4.mrna1;geneID=FBgn0027066.4.path1;Name=FBgn0027066.4;Dir=indeterminatecoverage=100.0;identity=99.8;matches=946;mismatches=2;indels=0;unknowns=0;Target=FBgn0027066.4 948 1 .;locus=RLOC_00012477
Chr1	stalkie_big_nohaplotig	exon	150833965	150834912	99	-	.	Parent=FBgn0027066.4.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150833965	150834912	.	-	0	Parent=FBgn0027066.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150946936	150975078	.	+	.	ID=FBgn0261260.1.mrna1;geneID=FBgn0261260.1.path1;Name=FBgn0261260.1;Dir=sensecoverage=97.3;identity=99.7;matches=13793;mismatches=39;indels=0;unknowns=0;locus=RLOC_00012478
Chr1	stalkie_big_nohaplotig	exon	150946936	150947103	99	+	.	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 389 556 +
Chr1	stalkie_big_nohaplotig	exon	150947174	150947305	99	+	.	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 557 688 +
Chr1	stalkie_big_nohaplotig	exon	150959708	150959983	99	+	.	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 689 964 +
Chr1	stalkie_big_nohaplotig	exon	150960677	150960931	100	+	.	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 965 1219 +
Chr1	stalkie_big_nohaplotig	exon	150961032	150963314	99	+	.	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 1220 3502 +
Chr1	stalkie_big_nohaplotig	exon	150963373	150969027	99	+	.	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 3503 9157 +
Chr1	stalkie_big_nohaplotig	exon	150969090	150969301	100	+	.	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 9158 9369 +
Chr1	stalkie_big_nohaplotig	exon	150969365	150969771	99	+	.	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 9370 9776 +
Chr1	stalkie_big_nohaplotig	exon	150969833	150971331	99	+	.	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 9777 11275 +
Chr1	stalkie_big_nohaplotig	exon	150971413	150971725	100	+	.	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 11276 11588 +
Chr1	stalkie_big_nohaplotig	exon	150971783	150973883	99	+	.	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 11589 13689 +
Chr1	stalkie_big_nohaplotig	exon	150974034	150974119	100	+	.	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 13690 13775 +
Chr1	stalkie_big_nohaplotig	exon	150974577	150974821	99	+	.	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 13776 14020 +
Chr1	stalkie_big_nohaplotig	exon	150974879	150975078	100	+	.	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 14021 14220 +
Chr1	stalkie_big_nohaplotig	CDS	150946938	150947103	.	+	0	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 391 556 +
Chr1	stalkie_big_nohaplotig	CDS	150947174	150947305	.	+	2	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 557 688 +
Chr1	stalkie_big_nohaplotig	CDS	150959708	150959983	.	+	2	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 689 964 +
Chr1	stalkie_big_nohaplotig	CDS	150960677	150960931	.	+	2	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 965 1219 +
Chr1	stalkie_big_nohaplotig	CDS	150961032	150963314	.	+	2	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 1220 3502 +
Chr1	stalkie_big_nohaplotig	CDS	150963373	150969027	.	+	2	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 3503 9157 +
Chr1	stalkie_big_nohaplotig	CDS	150969090	150969301	.	+	2	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 9158 9369 +
Chr1	stalkie_big_nohaplotig	CDS	150969365	150969771	.	+	0	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 9370 9776 +
Chr1	stalkie_big_nohaplotig	CDS	150969833	150971331	.	+	1	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 9777 11275 +
Chr1	stalkie_big_nohaplotig	CDS	150971413	150971725	.	+	2	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 11276 11588 +
Chr1	stalkie_big_nohaplotig	CDS	150971783	150973883	.	+	1	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 11589 13689 +
Chr1	stalkie_big_nohaplotig	CDS	150974034	150974119	.	+	0	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 13690 13775 +
Chr1	stalkie_big_nohaplotig	CDS	150974577	150974821	.	+	1	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 13776 14020 +
Chr1	stalkie_big_nohaplotig	CDS	150974879	150975078	.	+	2	Parent=FBgn0261260.1.mrna1;Target=FBgn0261260.1 14021 14220 +
Chr1	gffcl	locus	150975954	150976487	.	-	.	ID=RLOC_00012479;geneIDs=comp135450_c0_seq1.path1;transcripts=comp135450_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150975954	150976487	.	-	.	ID=comp135450_c0_seq1.mrna1;geneID=comp135450_c0_seq1.path1;Name=comp135450_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.6;matches=532;mismatches=1;indels=1;unknowns=0;Target=comp135450_c0_seq1 537 5 .;CDS_Target=comp135450_c0_seq1 93 7 .;locus=RLOC_00012479
Chr1	stalkie_big_nohaplotig	exon	150975954	150976487	99	-	.	Parent=comp135450_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150976399	150976485	.	-	0	Parent=comp135450_c0_seq1.mrna1
Chr1	gffcl	locus	150977272	150977660	.	+	.	ID=RLOC_00012480;geneIDs=comp151457_c0_seq1.path1;transcripts=comp151457_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150977272	150977660	.	+	.	ID=comp151457_c0_seq1.mrna1;geneID=comp151457_c0_seq1.path1;Name=comp151457_c0_seq1;Dir=indeterminatecoverage=99.7;identity=96.9;matches=377;mismatches=10;indels=2;unknowns=0;Target=comp151457_c0_seq1 388 2 .;CDS_Target=comp151457_c0_seq1 162 52 .;locus=RLOC_00012480
Chr1	stalkie_big_nohaplotig	exon	150977272	150977660	96	+	.	Parent=comp151457_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150977322	150977432	.	+	0	Parent=comp151457_c0_seq1.mrna1
Chr1	gffcl	locus	150983350	150984747	.	-	.	ID=RLOC_00012481;geneIDs=FBgn0042125.2.path1;transcripts=FBgn0042125.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150983350	150984747	.	-	.	ID=FBgn0042125.2.mrna1;geneID=FBgn0042125.2.path1;Name=FBgn0042125.2;Dir=indeterminatecoverage=100.0;identity=97.5;matches=1377;mismatches=15;indels=21;unknowns=0;Target=FBgn0042125.2 1407 1 .;locus=RLOC_00012481
Chr1	stalkie_big_nohaplotig	exon	150983350	150984747	97	-	.	Parent=FBgn0042125.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	150983350	150984747	.	-	0	Parent=FBgn0042125.2.mrna1
Chr1	gffcl	locus	150986761	151000928	.	-	.	ID=RLOC_00012482;geneIDs=FBgn0030478.1.path1;transcripts=FBgn0030478.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	150986761	151000928	.	-	.	ID=FBgn0030478.1.mrna1;geneID=FBgn0030478.1.path1;Name=FBgn0030478.1;Dir=sensecoverage=100.0;identity=99.3;matches=1701;mismatches=12;indels=0;unknowns=0;locus=RLOC_00012482
Chr1	stalkie_big_nohaplotig	exon	150986761	150986906	100	-	.	Parent=FBgn0030478.1.mrna1;Target=FBgn0030478.1 1568 1713 +
Chr1	stalkie_big_nohaplotig	exon	150986977	150987235	99	-	.	Parent=FBgn0030478.1.mrna1;Target=FBgn0030478.1 1309 1567 +
Chr1	stalkie_big_nohaplotig	exon	150988623	150989187	98	-	.	Parent=FBgn0030478.1.mrna1;Target=FBgn0030478.1 744 1308 +
Chr1	stalkie_big_nohaplotig	exon	150989248	150989510	99	-	.	Parent=FBgn0030478.1.mrna1;Target=FBgn0030478.1 481 743 +
Chr1	stalkie_big_nohaplotig	exon	150989749	150989838	100	-	.	Parent=FBgn0030478.1.mrna1;Target=FBgn0030478.1 391 480 +
Chr1	stalkie_big_nohaplotig	exon	151000539	151000928	99	-	.	Parent=FBgn0030478.1.mrna1;Target=FBgn0030478.1 1 390 +
Chr1	stalkie_big_nohaplotig	CDS	150986761	150986906	.	-	2	Parent=FBgn0030478.1.mrna1;Target=FBgn0030478.1 1568 1713 +
Chr1	stalkie_big_nohaplotig	CDS	150986977	150987235	.	-	0	Parent=FBgn0030478.1.mrna1;Target=FBgn0030478.1 1309 1567 +
Chr1	stalkie_big_nohaplotig	CDS	150988623	150989187	.	-	1	Parent=FBgn0030478.1.mrna1;Target=FBgn0030478.1 744 1308 +
Chr1	stalkie_big_nohaplotig	CDS	150989248	150989510	.	-	0	Parent=FBgn0030478.1.mrna1;Target=FBgn0030478.1 481 743 +
Chr1	stalkie_big_nohaplotig	CDS	150989749	150989838	.	-	0	Parent=FBgn0030478.1.mrna1;Target=FBgn0030478.1 391 480 +
Chr1	stalkie_big_nohaplotig	CDS	151000539	151000928	.	-	0	Parent=FBgn0030478.1.mrna1;Target=FBgn0030478.1 1 390 +
Chr1	gffcl	locus	151015725	153058587	.	+	.	ID=RLOC_00012483;geneIDs=FBgn0085478.1.path1,comp154056_c3_seq1.path1;transcripts=comp154056_c3_seq1.mrna1,FBgn0085478.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151015725	153058587	.	+	.	ID=comp154056_c3_seq1.mrna1;geneID=comp154056_c3_seq1.path1;Name=comp154056_c3_seq1;Dir=sensecoverage=96.1;identity=97.6;matches=2847;mismatches=12;indels=57;unknowns=0;locus=RLOC_00012483
Chr1	stalkie_big_nohaplotig	exon	151015725	151015845	88	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 49 169 +
Chr1	stalkie_big_nohaplotig	exon	151015935	151016770	99	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 170 1003 +
Chr1	stalkie_big_nohaplotig	exon	151065917	151066035	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 1004 1122 +
Chr1	stalkie_big_nohaplotig	exon	151066088	151066245	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 1123 1280 +
Chr1	stalkie_big_nohaplotig	exon	151066308	151066480	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 1281 1453 +
Chr1	stalkie_big_nohaplotig	exon	151066573	151066767	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 1454 1648 +
Chr1	stalkie_big_nohaplotig	exon	151066850	151067120	99	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 1649 1919 +
Chr1	stalkie_big_nohaplotig	exon	151070943	151071175	99	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 1920 2152 +
Chr1	stalkie_big_nohaplotig	exon	151071240	151071422	99	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2153 2335 +
Chr1	stalkie_big_nohaplotig	exon	151073490	151073690	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2336 2536 +
Chr1	stalkie_big_nohaplotig	exon	151078154	151078346	99	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2537 2729 +
Chr1	stalkie_big_nohaplotig	exon	152856329	152856336	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2730 2737 +
Chr1	stalkie_big_nohaplotig	exon	152856350	152856356	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2748 2754 +
Chr1	stalkie_big_nohaplotig	exon	152856887	152856895	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2755 2763 +
Chr1	stalkie_big_nohaplotig	exon	152856910	152856911	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2789 2790 +
Chr1	stalkie_big_nohaplotig	exon	152873209	152873210	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2791 2792 +
Chr1	stalkie_big_nohaplotig	exon	152876426	152876430	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2793 2797 +
Chr1	stalkie_big_nohaplotig	exon	152880913	152880917	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2798 2802 +
Chr1	stalkie_big_nohaplotig	exon	152886893	152886896	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2803 2806 +
Chr1	stalkie_big_nohaplotig	exon	152888182	152888188	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2807 2813 +
Chr1	stalkie_big_nohaplotig	exon	152895842	152895843	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2814 2815 +
Chr1	stalkie_big_nohaplotig	exon	152903577	152903579	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2816 2818 +
Chr1	stalkie_big_nohaplotig	exon	152926580	152926588	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2819 2827 +
Chr1	stalkie_big_nohaplotig	exon	152926756	152926757	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2828 2829 +
Chr1	stalkie_big_nohaplotig	exon	152934907	152934911	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2830 2834 +
Chr1	stalkie_big_nohaplotig	exon	152948697	152948699	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2835 2837 +
Chr1	stalkie_big_nohaplotig	exon	152952068	152952121	16	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2838 2846 +
Chr1	stalkie_big_nohaplotig	exon	152953536	152953546	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2847 2857 +
Chr1	stalkie_big_nohaplotig	exon	152954787	152954796	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2873 2882 +
Chr1	stalkie_big_nohaplotig	exon	152960734	152960739	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2883 2888 +
Chr1	stalkie_big_nohaplotig	exon	152962529	152962532	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2889 2892 +
Chr1	stalkie_big_nohaplotig	exon	152969263	152969266	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2893 2896 +
Chr1	stalkie_big_nohaplotig	exon	152976168	152976173	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2897 2902 +
Chr1	stalkie_big_nohaplotig	exon	152983857	152983859	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2903 2905 +
Chr1	stalkie_big_nohaplotig	exon	152986662	152986664	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2906 2908 +
Chr1	stalkie_big_nohaplotig	exon	152993598	152993605	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2909 2916 +
Chr1	stalkie_big_nohaplotig	exon	152996974	152996976	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2917 2919 +
Chr1	stalkie_big_nohaplotig	exon	153003032	153003039	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2920 2927 +
Chr1	stalkie_big_nohaplotig	exon	153007122	153007130	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2928 2936 +
Chr1	stalkie_big_nohaplotig	exon	153019739	153019742	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2939 2942 +
Chr1	stalkie_big_nohaplotig	exon	153024980	153024984	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2943 2947 +
Chr1	stalkie_big_nohaplotig	exon	153032986	153032992	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2948 2954 +
Chr1	stalkie_big_nohaplotig	exon	153037149	153037153	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2955 2959 +
Chr1	stalkie_big_nohaplotig	exon	153058583	153058587	100	+	.	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2960 2964 +
Chr1	stalkie_big_nohaplotig	CDS	151016679	151016770	.	+	0	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 912 1003 +
Chr1	stalkie_big_nohaplotig	CDS	151065917	151066035	.	+	1	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 1004 1122 +
Chr1	stalkie_big_nohaplotig	CDS	151066088	151066245	.	+	2	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 1123 1280 +
Chr1	stalkie_big_nohaplotig	CDS	151066308	151066480	.	+	0	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 1281 1453 +
Chr1	stalkie_big_nohaplotig	CDS	151066573	151066767	.	+	1	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 1454 1648 +
Chr1	stalkie_big_nohaplotig	CDS	151066850	151067120	.	+	1	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 1649 1919 +
Chr1	stalkie_big_nohaplotig	CDS	151070943	151071175	.	+	0	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 1920 2152 +
Chr1	stalkie_big_nohaplotig	CDS	151071240	151071422	.	+	1	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2153 2335 +
Chr1	stalkie_big_nohaplotig	CDS	151073490	151073526	.	+	1	Parent=comp154056_c3_seq1.mrna1;Target=comp154056_c3_seq1 2336 2372 +
Chr1	stalkie_big_nohaplotig	mRNA	151065917	151078373	.	+	.	ID=FBgn0085478.1.mrna1;geneID=FBgn0085478.1.path1;Name=FBgn0085478.1;Dir=sensecoverage=92.2;identity=99.5;matches=1545;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012483
Chr1	stalkie_big_nohaplotig	exon	151065917	151066035	100	+	.	Parent=FBgn0085478.1.mrna1;Target=FBgn0085478.1 108 226 +
Chr1	stalkie_big_nohaplotig	exon	151066088	151066245	100	+	.	Parent=FBgn0085478.1.mrna1;Target=FBgn0085478.1 227 384 +
Chr1	stalkie_big_nohaplotig	exon	151066308	151066480	100	+	.	Parent=FBgn0085478.1.mrna1;Target=FBgn0085478.1 385 557 +
Chr1	stalkie_big_nohaplotig	exon	151066573	151066767	100	+	.	Parent=FBgn0085478.1.mrna1;Target=FBgn0085478.1 558 752 +
Chr1	stalkie_big_nohaplotig	exon	151066850	151067120	99	+	.	Parent=FBgn0085478.1.mrna1;Target=FBgn0085478.1 753 1023 +
Chr1	stalkie_big_nohaplotig	exon	151070943	151071175	99	+	.	Parent=FBgn0085478.1.mrna1;Target=FBgn0085478.1 1024 1256 +
Chr1	stalkie_big_nohaplotig	exon	151071240	151071422	99	+	.	Parent=FBgn0085478.1.mrna1;Target=FBgn0085478.1 1257 1439 +
Chr1	stalkie_big_nohaplotig	exon	151078154	151078373	98	+	.	Parent=FBgn0085478.1.mrna1;Target=FBgn0085478.1 1440 1659 +
Chr1	stalkie_big_nohaplotig	CDS	151065918	151066035	.	+	0	Parent=FBgn0085478.1.mrna1;Target=FBgn0085478.1 109 226 +
Chr1	stalkie_big_nohaplotig	CDS	151066088	151066245	.	+	2	Parent=FBgn0085478.1.mrna1;Target=FBgn0085478.1 227 384 +
Chr1	stalkie_big_nohaplotig	CDS	151066308	151066480	.	+	0	Parent=FBgn0085478.1.mrna1;Target=FBgn0085478.1 385 557 +
Chr1	stalkie_big_nohaplotig	CDS	151066573	151066767	.	+	1	Parent=FBgn0085478.1.mrna1;Target=FBgn0085478.1 558 752 +
Chr1	stalkie_big_nohaplotig	CDS	151066850	151067120	.	+	1	Parent=FBgn0085478.1.mrna1;Target=FBgn0085478.1 753 1023 +
Chr1	stalkie_big_nohaplotig	CDS	151070943	151071175	.	+	0	Parent=FBgn0085478.1.mrna1;Target=FBgn0085478.1 1024 1256 +
Chr1	stalkie_big_nohaplotig	CDS	151071240	151071422	.	+	1	Parent=FBgn0085478.1.mrna1;Target=FBgn0085478.1 1257 1439 +
Chr1	stalkie_big_nohaplotig	CDS	151078154	151078373	.	+	1	Parent=FBgn0085478.1.mrna1;Target=FBgn0085478.1 1440 1659 +
Chr1	gffcl	locus	151054347	151055132	.	-	.	ID=RLOC_00012484;geneIDs=comp147892_c1_seq1.path1;transcripts=comp147892_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151054347	151055132	.	-	.	ID=comp147892_c1_seq1.mrna1;geneID=comp147892_c1_seq1.path1;Name=comp147892_c1_seq1;Dir=sensecoverage=100.0;identity=92.9;matches=628;mismatches=34;indels=14;unknowns=0;Target=comp147892_c1_seq1 31 36 +;locus=RLOC_00012484
Chr1	stalkie_big_nohaplotig	exon	151054347	151054783	94	-	.	Parent=comp147892_c1_seq1.mrna1;Target=comp147892_c1_seq1 243 678 +
Chr1	stalkie_big_nohaplotig	exon	151054869	151054889	90	-	.	Parent=comp147892_c1_seq1.mrna1;Target=comp147892_c1_seq1 222 242 +
Chr1	stalkie_big_nohaplotig	exon	151054927	151055132	88	-	.	Parent=comp147892_c1_seq1.mrna1;Target=comp147892_c1_seq1 1 217 +
Chr1	stalkie_big_nohaplotig	CDS	151055097	151055102	.	-	0	Parent=comp147892_c1_seq1.mrna1
Chr1	gffcl	locus	151075326	151076162	.	+	.	ID=RLOC_00012485;geneIDs=ORF2588.path1;transcripts=ORF2588.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151075326	151076162	.	+	.	ID=ORF2588.mrna1;geneID=ORF2588.path1;Name=ORF2588;Dir=indeterminatecoverage=100.0;identity=99.6;matches=834;mismatches=3;indels=0;unknowns=0;Target=ORF2588 837 1 .;locus=RLOC_00012485
Chr1	stalkie_big_nohaplotig	exon	151075326	151076162	99	+	.	Parent=ORF2588.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151075326	151076162	.	+	0	Parent=ORF2588.mrna1
Chr1	gffcl	locus	151082931	151083347	.	-	.	ID=RLOC_00012486;geneIDs=comp135962_c0_seq1.path1;transcripts=comp135962_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151082931	151083347	.	-	.	ID=comp135962_c0_seq1.mrna1;geneID=comp135962_c0_seq1.path1;Name=comp135962_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=416;mismatches=1;indels=0;unknowns=0;Target=comp135962_c0_seq1 417 1 .;CDS_Target=comp135962_c0_seq1 231 67 .;locus=RLOC_00012486
Chr1	stalkie_big_nohaplotig	exon	151082931	151083347	99	-	.	Parent=comp135962_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151083117	151083281	.	-	0	Parent=comp135962_c0_seq1.mrna1
Chr1	gffcl	locus	151084060	151085120	.	-	.	ID=RLOC_00012487;geneIDs=FBgn0030653.3.path1;transcripts=FBgn0030653.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151084060	151085120	.	-	.	ID=FBgn0030653.3.mrna1;geneID=FBgn0030653.3.path1;Name=FBgn0030653.3;Dir=sensecoverage=100.0;identity=98.7;matches=983;mismatches=13;indels=0;unknowns=0;locus=RLOC_00012487
Chr1	stalkie_big_nohaplotig	exon	151084060	151085001	98	-	.	Parent=FBgn0030653.3.mrna1;Target=FBgn0030653.3 55 996 +
Chr1	stalkie_big_nohaplotig	exon	151085067	151085120	100	-	.	Parent=FBgn0030653.3.mrna1;Target=FBgn0030653.3 1 54 +
Chr1	stalkie_big_nohaplotig	CDS	151084060	151085001	.	-	0	Parent=FBgn0030653.3.mrna1;Target=FBgn0030653.3 55 996 +
Chr1	stalkie_big_nohaplotig	CDS	151085067	151085120	.	-	0	Parent=FBgn0030653.3.mrna1;Target=FBgn0030653.3 1 54 +
Chr1	gffcl	locus	151086086	151087430	.	-	.	ID=RLOC_00012488;geneIDs=FBgn0030653.1.path1;transcripts=FBgn0030653.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151086086	151087430	.	-	.	ID=FBgn0030653.1.mrna1;geneID=FBgn0030653.1.path1;Name=FBgn0030653.1;Dir=sensecoverage=100.0;identity=98.5;matches=1052;mismatches=16;indels=0;unknowns=0;locus=RLOC_00012488
Chr1	stalkie_big_nohaplotig	exon	151086086	151087060	98	-	.	Parent=FBgn0030653.1.mrna1;Target=FBgn0030653.1 94 1068 +
Chr1	stalkie_big_nohaplotig	exon	151087126	151087170	100	-	.	Parent=FBgn0030653.1.mrna1;Target=FBgn0030653.1 49 93 +
Chr1	stalkie_big_nohaplotig	exon	151087383	151087430	100	-	.	Parent=FBgn0030653.1.mrna1;Target=FBgn0030653.1 1 48 +
Chr1	stalkie_big_nohaplotig	CDS	151086086	151087060	.	-	0	Parent=FBgn0030653.1.mrna1;Target=FBgn0030653.1 94 1068 +
Chr1	stalkie_big_nohaplotig	CDS	151087126	151087170	.	-	0	Parent=FBgn0030653.1.mrna1;Target=FBgn0030653.1 49 93 +
Chr1	stalkie_big_nohaplotig	CDS	151087383	151087430	.	-	0	Parent=FBgn0030653.1.mrna1;Target=FBgn0030653.1 1 48 +
Chr1	gffcl	locus	151090602	151091485	.	+	.	ID=RLOC_00012489;geneIDs=FBgn0038332.1.path1;transcripts=FBgn0038332.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151090602	151091485	.	+	.	ID=FBgn0038332.1.mrna1;geneID=FBgn0038332.1.path1;Name=FBgn0038332.1;Dir=indeterminatecoverage=99.2;identity=98.9;matches=874;mismatches=10;indels=0;unknowns=0;Target=FBgn0038332.1 891 8 .;CDS_Target=FBgn0038332.1 891 10 .;locus=RLOC_00012489
Chr1	stalkie_big_nohaplotig	exon	151090602	151091485	98	+	.	Parent=FBgn0038332.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151090604	151091485	.	+	0	Parent=FBgn0038332.1.mrna1
Chr1	gffcl	locus	151092588	151094100	.	+	.	ID=RLOC_00012490;geneIDs=FBgn0026749.1.path1;transcripts=FBgn0026749.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151092588	151094100	.	+	.	ID=FBgn0026749.1.mrna1;geneID=FBgn0026749.1.path1;Name=FBgn0026749.1;Dir=sensecoverage=100.0;identity=100.0;matches=369;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012490
Chr1	stalkie_big_nohaplotig	exon	151092588	151092711	100	+	.	Parent=FBgn0026749.1.mrna1;Target=FBgn0026749.1 1 124 +
Chr1	stalkie_big_nohaplotig	exon	151092783	151092942	100	+	.	Parent=FBgn0026749.1.mrna1;Target=FBgn0026749.1 125 284 +
Chr1	stalkie_big_nohaplotig	exon	151094016	151094100	100	+	.	Parent=FBgn0026749.1.mrna1;Target=FBgn0026749.1 285 369 +
Chr1	stalkie_big_nohaplotig	CDS	151092588	151092711	.	+	0	Parent=FBgn0026749.1.mrna1;Target=FBgn0026749.1 1 124 +
Chr1	stalkie_big_nohaplotig	CDS	151092783	151092942	.	+	2	Parent=FBgn0026749.1.mrna1;Target=FBgn0026749.1 125 284 +
Chr1	stalkie_big_nohaplotig	CDS	151094016	151094100	.	+	1	Parent=FBgn0026749.1.mrna1;Target=FBgn0026749.1 285 369 +
Chr1	gffcl	locus	151095018	151095476	.	-	.	ID=RLOC_00012491;geneIDs=FBgn0030480.1.path1;transcripts=FBgn0030480.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151095018	151095476	.	-	.	ID=FBgn0030480.1.mrna1;geneID=FBgn0030480.1.path1;Name=FBgn0030480.1;Dir=sensecoverage=100.0;identity=100.0;matches=303;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012491
Chr1	stalkie_big_nohaplotig	exon	151095018	151095146	100	-	.	Parent=FBgn0030480.1.mrna1;Target=FBgn0030480.1 175 303 +
Chr1	stalkie_big_nohaplotig	exon	151095225	151095320	100	-	.	Parent=FBgn0030480.1.mrna1;Target=FBgn0030480.1 79 174 +
Chr1	stalkie_big_nohaplotig	exon	151095399	151095476	100	-	.	Parent=FBgn0030480.1.mrna1;Target=FBgn0030480.1 1 78 +
Chr1	stalkie_big_nohaplotig	CDS	151095018	151095146	.	-	0	Parent=FBgn0030480.1.mrna1;Target=FBgn0030480.1 175 303 +
Chr1	stalkie_big_nohaplotig	CDS	151095225	151095320	.	-	0	Parent=FBgn0030480.1.mrna1;Target=FBgn0030480.1 79 174 +
Chr1	stalkie_big_nohaplotig	CDS	151095399	151095476	.	-	0	Parent=FBgn0030480.1.mrna1;Target=FBgn0030480.1 1 78 +
Chr1	gffcl	locus	151098096	151104170	.	-	.	ID=RLOC_00012492;geneIDs=FBgn0004655.1.path1,comp365077_c0_seq1.path1;transcripts=FBgn0004655.1.mrna1,comp365077_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151098096	151104170	.	-	.	ID=FBgn0004655.1.mrna1;geneID=FBgn0004655.1.path1;Name=FBgn0004655.1;Dir=sensecoverage=100.0;identity=99.8;matches=4865;mismatches=10;indels=0;unknowns=0;locus=RLOC_00012492
Chr1	stalkie_big_nohaplotig	exon	151098096	151098323	100	-	.	Parent=FBgn0004655.1.mrna1;Target=FBgn0004655.1 4648 4875 +
Chr1	stalkie_big_nohaplotig	exon	151098390	151098580	100	-	.	Parent=FBgn0004655.1.mrna1;Target=FBgn0004655.1 4457 4647 +
Chr1	stalkie_big_nohaplotig	exon	151098653	151098741	100	-	.	Parent=FBgn0004655.1.mrna1;Target=FBgn0004655.1 4368 4456 +
Chr1	stalkie_big_nohaplotig	exon	151098812	151098981	100	-	.	Parent=FBgn0004655.1.mrna1;Target=FBgn0004655.1 4198 4367 +
Chr1	stalkie_big_nohaplotig	exon	151099057	151099887	99	-	.	Parent=FBgn0004655.1.mrna1;Target=FBgn0004655.1 3367 4197 +
Chr1	stalkie_big_nohaplotig	exon	151099939	151102392	99	-	.	Parent=FBgn0004655.1.mrna1;Target=FBgn0004655.1 913 3366 +
Chr1	stalkie_big_nohaplotig	exon	151103259	151104170	99	-	.	Parent=FBgn0004655.1.mrna1;Target=FBgn0004655.1 1 912 +
Chr1	stalkie_big_nohaplotig	CDS	151098096	151098323	.	-	0	Parent=FBgn0004655.1.mrna1;Target=FBgn0004655.1 4648 4875 +
Chr1	stalkie_big_nohaplotig	CDS	151098390	151098580	.	-	2	Parent=FBgn0004655.1.mrna1;Target=FBgn0004655.1 4457 4647 +
Chr1	stalkie_big_nohaplotig	CDS	151098653	151098741	.	-	1	Parent=FBgn0004655.1.mrna1;Target=FBgn0004655.1 4368 4456 +
Chr1	stalkie_big_nohaplotig	CDS	151098812	151098981	.	-	0	Parent=FBgn0004655.1.mrna1;Target=FBgn0004655.1 4198 4367 +
Chr1	stalkie_big_nohaplotig	CDS	151099057	151099887	.	-	0	Parent=FBgn0004655.1.mrna1;Target=FBgn0004655.1 3367 4197 +
Chr1	stalkie_big_nohaplotig	CDS	151099939	151102392	.	-	0	Parent=FBgn0004655.1.mrna1;Target=FBgn0004655.1 913 3366 +
Chr1	stalkie_big_nohaplotig	CDS	151103259	151104170	.	-	0	Parent=FBgn0004655.1.mrna1;Target=FBgn0004655.1 1 912 +
Chr1	stalkie_big_nohaplotig	mRNA	151102347	151102695	.	-	.	ID=comp365077_c0_seq1.mrna1;geneID=comp365077_c0_seq1.path1;Name=comp365077_c0_seq1;Dir=sensecoverage=100.0;identity=99.2;matches=263;mismatches=2;indels=0;unknowns=0;Target=comp365077_c0_seq1 2 61 +;locus=RLOC_00012492
Chr1	stalkie_big_nohaplotig	exon	151102347	151102392	97	-	.	Parent=comp365077_c0_seq1.mrna1;Target=comp365077_c0_seq1 220 265 +
Chr1	stalkie_big_nohaplotig	exon	151102477	151102695	99	-	.	Parent=comp365077_c0_seq1.mrna1;Target=comp365077_c0_seq1 1 219 +
Chr1	stalkie_big_nohaplotig	CDS	151102635	151102694	.	-	0	Parent=comp365077_c0_seq1.mrna1
Chr1	gffcl	locus	151106465	151113825	.	-	.	ID=RLOC_00012493;geneIDs=FBgn0030334.1.path1;transcripts=FBgn0030334.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151106465	151113825	.	-	.	ID=FBgn0030334.1.mrna1;geneID=FBgn0030334.1.path1;Name=FBgn0030334.1;Dir=sensecoverage=99.7;identity=99.8;matches=615;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012493
Chr1	stalkie_big_nohaplotig	exon	151106465	151106624	99	-	.	Parent=FBgn0030334.1.mrna1;Target=FBgn0030334.1 459 618 +
Chr1	stalkie_big_nohaplotig	exon	151106679	151106835	100	-	.	Parent=FBgn0030334.1.mrna1;Target=FBgn0030334.1 302 458 +
Chr1	stalkie_big_nohaplotig	exon	151106926	151107049	100	-	.	Parent=FBgn0030334.1.mrna1;Target=FBgn0030334.1 178 301 +
Chr1	stalkie_big_nohaplotig	exon	151109348	151109485	100	-	.	Parent=FBgn0030334.1.mrna1;Target=FBgn0030334.1 40 177 +
Chr1	stalkie_big_nohaplotig	exon	151113789	151113825	100	-	.	Parent=FBgn0030334.1.mrna1;Target=FBgn0030334.1 3 39 +
Chr1	stalkie_big_nohaplotig	CDS	151106465	151106624	.	-	1	Parent=FBgn0030334.1.mrna1;Target=FBgn0030334.1 459 618 +
Chr1	stalkie_big_nohaplotig	CDS	151106679	151106835	.	-	2	Parent=FBgn0030334.1.mrna1;Target=FBgn0030334.1 302 458 +
Chr1	stalkie_big_nohaplotig	CDS	151106926	151107049	.	-	0	Parent=FBgn0030334.1.mrna1;Target=FBgn0030334.1 178 301 +
Chr1	stalkie_big_nohaplotig	CDS	151109348	151109485	.	-	0	Parent=FBgn0030334.1.mrna1;Target=FBgn0030334.1 40 177 +
Chr1	stalkie_big_nohaplotig	CDS	151113789	151113824	.	-	0	Parent=FBgn0030334.1.mrna1;Target=FBgn0030334.1 4 39 +
Chr1	gffcl	locus	151142941	151143425	.	-	.	ID=RLOC_00012494;geneIDs=comp77445_c0_seq1.path1;transcripts=comp77445_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151142941	151143425	.	-	.	ID=comp77445_c0_seq1.mrna1;geneID=comp77445_c0_seq1.path1;Name=comp77445_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=308;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012494
Chr1	stalkie_big_nohaplotig	exon	151142941	151142965	100	-	.	Parent=comp77445_c0_seq1.mrna1;Target=comp77445_c0_seq1 285 309 +
Chr1	stalkie_big_nohaplotig	exon	151143020	151143137	99	-	.	Parent=comp77445_c0_seq1.mrna1;Target=comp77445_c0_seq1 167 284 +
Chr1	stalkie_big_nohaplotig	exon	151143196	151143265	100	-	.	Parent=comp77445_c0_seq1.mrna1;Target=comp77445_c0_seq1 97 166 +
Chr1	stalkie_big_nohaplotig	exon	151143330	151143425	100	-	.	Parent=comp77445_c0_seq1.mrna1;Target=comp77445_c0_seq1 1 96 +
Chr1	stalkie_big_nohaplotig	CDS	151142942	151142965	.	-	0	Parent=comp77445_c0_seq1.mrna1;Target=comp77445_c0_seq1 285 308 +
Chr1	stalkie_big_nohaplotig	CDS	151143020	151143137	.	-	1	Parent=comp77445_c0_seq1.mrna1;Target=comp77445_c0_seq1 167 284 +
Chr1	stalkie_big_nohaplotig	CDS	151143196	151143265	.	-	2	Parent=comp77445_c0_seq1.mrna1;Target=comp77445_c0_seq1 97 166 +
Chr1	stalkie_big_nohaplotig	CDS	151143330	151143423	.	-	0	Parent=comp77445_c0_seq1.mrna1;Target=comp77445_c0_seq1 3 96 +
Chr1	gffcl	locus	151150571	151151721	.	.	.	ID=RLOC_00012495;geneIDs=comp95744_c0_seq1.path1,comp162843_c0_seq1.path1;transcripts=comp162843_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151150571	151151534	.	-	.	ID=comp162843_c0_seq1.mrna1;geneID=comp162843_c0_seq1.path1;Name=comp162843_c0_seq1;Dir=antisensecoverage=95.8;identity=90.1;matches=627;mismatches=58;indels=11;unknowns=0;Target=comp162843_c0_seq1 429 456 .;locus=RLOC_00012495
Chr1	stalkie_big_nohaplotig	exon	151150571	151150753	91	-	.	Parent=comp162843_c0_seq1.mrna1;Target=comp162843_c0_seq1 5 187 -
Chr1	stalkie_big_nohaplotig	exon	151150863	151150934	91	-	.	Parent=comp162843_c0_seq1.mrna1;Target=comp162843_c0_seq1 243 314 -
Chr1	stalkie_big_nohaplotig	exon	151150993	151151065	89	-	.	Parent=comp162843_c0_seq1.mrna1;Target=comp162843_c0_seq1 315 387 -
Chr1	stalkie_big_nohaplotig	exon	151151167	151151534	89	-	.	Parent=comp162843_c0_seq1.mrna1;Target=comp162843_c0_seq1 429 785 -
Chr1	stalkie_big_nohaplotig	CDS	151151167	151151194	.	-	0	Parent=comp162843_c0_seq1.mrna1
Chr1	gffcl	locus	151176699	151178534	.	+	.	ID=RLOC_00012496;geneIDs=FBgn0004511.1.path1;transcripts=FBgn0004511.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151176699	151178534	.	+	.	ID=FBgn0004511.1.mrna1;geneID=FBgn0004511.1.path1;Name=FBgn0004511.1;Dir=sensecoverage=96.2;identity=99.6;matches=1685;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012496
Chr1	stalkie_big_nohaplotig	exon	151176699	151176867	98	+	.	Parent=FBgn0004511.1.mrna1;Target=FBgn0004511.1 67 235 +
Chr1	stalkie_big_nohaplotig	exon	151177012	151178534	99	+	.	Parent=FBgn0004511.1.mrna1;Target=FBgn0004511.1 236 1758 +
Chr1	stalkie_big_nohaplotig	CDS	151176699	151176867	.	+	0	Parent=FBgn0004511.1.mrna1;Target=FBgn0004511.1 67 235 +
Chr1	stalkie_big_nohaplotig	CDS	151177012	151178534	.	+	2	Parent=FBgn0004511.1.mrna1;Target=FBgn0004511.1 236 1758 +
Chr1	gffcl	locus	151182851	151189039	.	+	.	ID=RLOC_00012497;geneIDs=FBgn0053180.1.path1;transcripts=FBgn0053180.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151182851	151189039	.	+	.	ID=FBgn0053180.1.mrna1;geneID=FBgn0053180.1.path1;Name=FBgn0053180.1;Dir=sensecoverage=100.0;identity=99.9;matches=3290;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012497
Chr1	stalkie_big_nohaplotig	exon	151182851	151182865	100	+	.	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 1 15 +
Chr1	stalkie_big_nohaplotig	exon	151183142	151183371	100	+	.	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 16 245 +
Chr1	stalkie_big_nohaplotig	exon	151183436	151183601	100	+	.	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 246 411 +
Chr1	stalkie_big_nohaplotig	exon	151183660	151183889	100	+	.	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 412 641 +
Chr1	stalkie_big_nohaplotig	exon	151183950	151184049	100	+	.	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 642 741 +
Chr1	stalkie_big_nohaplotig	exon	151184173	151184289	100	+	.	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 742 858 +
Chr1	stalkie_big_nohaplotig	exon	151184346	151184444	100	+	.	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 859 957 +
Chr1	stalkie_big_nohaplotig	exon	151185204	151185350	99	+	.	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 958 1104 +
Chr1	stalkie_big_nohaplotig	exon	151185414	151185887	99	+	.	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 1105 1578 +
Chr1	stalkie_big_nohaplotig	exon	151185961	151186166	100	+	.	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 1579 1784 +
Chr1	stalkie_big_nohaplotig	exon	151186237	151186381	100	+	.	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 1785 1929 +
Chr1	stalkie_big_nohaplotig	exon	151186446	151186593	100	+	.	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 1930 2077 +
Chr1	stalkie_big_nohaplotig	exon	151186654	151186807	100	+	.	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 2078 2231 +
Chr1	stalkie_big_nohaplotig	exon	151186868	151187273	99	+	.	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 2232 2637 +
Chr1	stalkie_big_nohaplotig	exon	151187329	151187467	100	+	.	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 2638 2776 +
Chr1	stalkie_big_nohaplotig	exon	151187594	151187671	100	+	.	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 2777 2854 +
Chr1	stalkie_big_nohaplotig	exon	151187739	151187800	100	+	.	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 2855 2916 +
Chr1	stalkie_big_nohaplotig	exon	151188055	151188194	100	+	.	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 2917 3056 +
Chr1	stalkie_big_nohaplotig	exon	151188258	151188377	100	+	.	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 3057 3176 +
Chr1	stalkie_big_nohaplotig	exon	151188450	151188520	100	+	.	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 3177 3247 +
Chr1	stalkie_big_nohaplotig	exon	151188993	151189039	100	+	.	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 3248 3294 +
Chr1	stalkie_big_nohaplotig	CDS	151182851	151182865	.	+	0	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 1 15 +
Chr1	stalkie_big_nohaplotig	CDS	151183142	151183371	.	+	0	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 16 245 +
Chr1	stalkie_big_nohaplotig	CDS	151183436	151183601	.	+	1	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 246 411 +
Chr1	stalkie_big_nohaplotig	CDS	151183660	151183889	.	+	0	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 412 641 +
Chr1	stalkie_big_nohaplotig	CDS	151183950	151184049	.	+	1	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 642 741 +
Chr1	stalkie_big_nohaplotig	CDS	151184173	151184289	.	+	0	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 742 858 +
Chr1	stalkie_big_nohaplotig	CDS	151184346	151184444	.	+	0	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 859 957 +
Chr1	stalkie_big_nohaplotig	CDS	151185204	151185350	.	+	0	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 958 1104 +
Chr1	stalkie_big_nohaplotig	CDS	151185414	151185887	.	+	0	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 1105 1578 +
Chr1	stalkie_big_nohaplotig	CDS	151185961	151186166	.	+	0	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 1579 1784 +
Chr1	stalkie_big_nohaplotig	CDS	151186237	151186381	.	+	1	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 1785 1929 +
Chr1	stalkie_big_nohaplotig	CDS	151186446	151186593	.	+	0	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 1930 2077 +
Chr1	stalkie_big_nohaplotig	CDS	151186654	151186807	.	+	2	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 2078 2231 +
Chr1	stalkie_big_nohaplotig	CDS	151186868	151187273	.	+	1	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 2232 2637 +
Chr1	stalkie_big_nohaplotig	CDS	151187329	151187467	.	+	0	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 2638 2776 +
Chr1	stalkie_big_nohaplotig	CDS	151187594	151187671	.	+	2	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 2777 2854 +
Chr1	stalkie_big_nohaplotig	CDS	151187739	151187800	.	+	2	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 2855 2916 +
Chr1	stalkie_big_nohaplotig	CDS	151188055	151188194	.	+	0	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 2917 3056 +
Chr1	stalkie_big_nohaplotig	CDS	151188258	151188377	.	+	1	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 3057 3176 +
Chr1	stalkie_big_nohaplotig	CDS	151188450	151188520	.	+	1	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 3177 3247 +
Chr1	stalkie_big_nohaplotig	CDS	151188993	151189039	.	+	2	Parent=FBgn0053180.1.mrna1;Target=FBgn0053180.1 3248 3294 +
Chr1	gffcl	locus	151191683	151192762	.	+	.	ID=RLOC_00012498;geneIDs=FBgn0001105.1.path1;transcripts=FBgn0001105.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151191683	151192762	.	+	.	ID=FBgn0001105.1.mrna1;geneID=FBgn0001105.1.path1;Name=FBgn0001105.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1079;mismatches=1;indels=0;unknowns=0;Target=FBgn0001105.1 1080 1 .;locus=RLOC_00012498
Chr1	stalkie_big_nohaplotig	exon	151191683	151192762	99	+	.	Parent=FBgn0001105.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151191683	151192762	.	+	0	Parent=FBgn0001105.1.mrna1
Chr1	gffcl	locus	151194116	152895463	.	+	.	ID=RLOC_00012499;geneIDs=comp159938_c0_seq1.path1;transcripts=comp159938_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151194116	152895463	.	+	.	ID=comp159938_c0_seq1.mrna1;geneID=comp159938_c0_seq1.path1;Name=comp159938_c0_seq1;Dir=indeterminatecoverage=83.0;identity=98.8;matches=2037;mismatches=14;indels=10;unknowns=0;Target=comp159938_c0_seq1 128 3 .;locus=RLOC_00012499
Chr1	stalkie_big_nohaplotig	exon	151194116	151196113	99	+	.	Parent=comp159938_c0_seq1.mrna1;Target=comp159938_c0_seq1 2009 2 .
Chr1	stalkie_big_nohaplotig	exon	152852733	152852735	100	+	.	Parent=comp159938_c0_seq1.mrna1;Target=comp159938_c0_seq1 2012 2010 .
Chr1	stalkie_big_nohaplotig	exon	152855152	152855162	100	+	.	Parent=comp159938_c0_seq1.mrna1;Target=comp159938_c0_seq1 2023 2013 .
Chr1	stalkie_big_nohaplotig	exon	152860885	152860889	100	+	.	Parent=comp159938_c0_seq1.mrna1;Target=comp159938_c0_seq1 2028 2024 .
Chr1	stalkie_big_nohaplotig	exon	152873798	152873808	81	+	.	Parent=comp159938_c0_seq1.mrna1;Target=comp159938_c0_seq1 2039 2029 .
Chr1	stalkie_big_nohaplotig	exon	152881184	152881185	100	+	.	Parent=comp159938_c0_seq1.mrna1;Target=comp159938_c0_seq1 2041 2040 .
Chr1	stalkie_big_nohaplotig	exon	152888406	152888408	66	+	.	Parent=comp159938_c0_seq1.mrna1;Target=comp159938_c0_seq1 2044 2042 .
Chr1	stalkie_big_nohaplotig	exon	152895446	152895463	94	+	.	Parent=comp159938_c0_seq1.mrna1;Target=comp159938_c0_seq1 2062 2045 .
Chr1	stalkie_big_nohaplotig	CDS	151194117	151194242	.	+	0	Parent=comp159938_c0_seq1.mrna1
Chr1	gffcl	locus	151196110	151247896	.	.	.	ID=RLOC_00012500;geneIDs=comp128960_c0_seq1.path1,comp158432_c2_seq1.path1;transcripts=comp128960_c0_seq1.mrna1,comp158432_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151196110	151247896	.	-	.	ID=comp128960_c0_seq1.mrna1;geneID=comp128960_c0_seq1.path1;Name=comp128960_c0_seq1;Dir=indeterminatecoverage=81.6;identity=94.6;matches=629;mismatches=27;indels=9;unknowns=0;locus=RLOC_00012500
Chr1	stalkie_big_nohaplotig	exon	151196110	151196584	99	-	.	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 814 339 .
Chr1	stalkie_big_nohaplotig	exon	151198098	151198107	90	-	.	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 338 329 .
Chr1	stalkie_big_nohaplotig	exon	151198228	151198231	100	-	.	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 328 325 .
Chr1	stalkie_big_nohaplotig	exon	151205405	151205409	100	-	.	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 324 320 .
Chr1	stalkie_big_nohaplotig	exon	151214371	151214374	100	-	.	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 319 316 .
Chr1	stalkie_big_nohaplotig	exon	151214432	151214440	100	-	.	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 315 307 .
Chr1	stalkie_big_nohaplotig	exon	151217376	151217380	100	-	.	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 306 302 .
Chr1	stalkie_big_nohaplotig	exon	151222415	151222420	100	-	.	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 301 296 .
Chr1	stalkie_big_nohaplotig	exon	151223606	151223609	100	-	.	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 295 292 .
Chr1	stalkie_big_nohaplotig	exon	151225138	151225145	100	-	.	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 291 284 .
Chr1	stalkie_big_nohaplotig	exon	151227162	151227165	100	-	.	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 283 280 .
Chr1	stalkie_big_nohaplotig	exon	151227250	151227263	61	-	.	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 279 259 .
Chr1	stalkie_big_nohaplotig	exon	151227390	151227422	51	-	.	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 258 227 .
Chr1	stalkie_big_nohaplotig	exon	151229968	151229974	100	-	.	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 226 220 .
Chr1	stalkie_big_nohaplotig	exon	151237449	151237461	84	-	.	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 219 207 .
Chr1	stalkie_big_nohaplotig	exon	151239986	151239997	83	-	.	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 206 195 .
Chr1	stalkie_big_nohaplotig	exon	151242322	151242330	77	-	.	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 194 186 .
Chr1	stalkie_big_nohaplotig	exon	151242817	151242827	81	-	.	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 185 175 .
Chr1	stalkie_big_nohaplotig	exon	151245146	151245155	100	-	.	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 174 165 .
Chr1	stalkie_big_nohaplotig	exon	151247202	151247203	100	-	.	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 164 163 .
Chr1	stalkie_big_nohaplotig	exon	151247885	151247896	91	-	.	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 162 151 .
Chr1	stalkie_big_nohaplotig	CDS	151227398	151227422	.	-	0	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 250 227 .
Chr1	stalkie_big_nohaplotig	CDS	151229968	151229973	.	-	0	Parent=comp128960_c0_seq1.mrna1;Target=comp128960_c0_seq1 226 221 .
Chr1	stalkie_big_nohaplotig	mRNA	151197488	151198141	.	+	.	ID=comp158432_c2_seq1.mrna1;geneID=comp158432_c2_seq1.path1;Name=comp158432_c2_seq1;Dir=indeterminatecoverage=89.4;identity=95.3;matches=624;mismatches=16;indels=15;unknowns=0;Target=comp158432_c2_seq1 717 77 .;CDS_Target=comp158432_c2_seq1 536 387 .;locus=RLOC_00012500
Chr1	stalkie_big_nohaplotig	exon	151197488	151198141	95	+	.	Parent=comp158432_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151197811	151197960	.	+	0	Parent=comp158432_c2_seq1.mrna1
Chr1	gffcl	locus	151198935	151200542	.	+	.	ID=RLOC_00012501;geneIDs=comp162158_c0_seq1.path1;transcripts=comp162158_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151198935	151200542	.	+	.	ID=comp162158_c0_seq1.mrna1;geneID=comp162158_c0_seq1.path1;Name=comp162158_c0_seq1;Dir=indeterminatecoverage=65.3;identity=99.3;matches=1566;mismatches=9;indels=2;unknowns=0;Target=comp162158_c0_seq1 1316 1218 .;locus=RLOC_00012501
Chr1	stalkie_big_nohaplotig	exon	151198935	151199820	99	+	.	Parent=comp162158_c0_seq1.mrna1;Target=comp162158_c0_seq1 1729 843 .
Chr1	stalkie_big_nohaplotig	exon	151199854	151200542	99	+	.	Parent=comp162158_c0_seq1.mrna1;Target=comp162158_c0_seq1 2424 1735 .
Chr1	stalkie_big_nohaplotig	CDS	151199309	151199407	.	+	0	Parent=comp162158_c0_seq1.mrna1
Chr1	gffcl	locus	151201757	151202602	.	-	.	ID=RLOC_00012502;geneIDs=ORF2522.path1;transcripts=ORF2522.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151201757	151202602	.	-	.	ID=ORF2522.mrna1;geneID=ORF2522.path1;Name=ORF2522;Dir=indeterminatecoverage=100.0;identity=99.3;matches=840;mismatches=6;indels=0;unknowns=0;Target=ORF2522 846 1 .;locus=RLOC_00012502
Chr1	stalkie_big_nohaplotig	exon	151201757	151202602	99	-	.	Parent=ORF2522.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151201757	151202602	.	-	0	Parent=ORF2522.mrna1
Chr1	gffcl	locus	151263056	151263586	.	+	.	ID=RLOC_00012503;geneIDs=comp74104_c0_seq1.path1;transcripts=comp74104_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151263056	151263586	.	+	.	ID=comp74104_c0_seq1.mrna1;geneID=comp74104_c0_seq1.path1;Name=comp74104_c0_seq1;Dir=indeterminatecoverage=70.9;identity=96.0;matches=510;mismatches=16;indels=5;unknowns=0;Target=comp74104_c0_seq1 734 209 .;CDS_Target=comp74104_c0_seq1 362 210 .;locus=RLOC_00012503
Chr1	stalkie_big_nohaplotig	exon	151263056	151263586	96	+	.	Parent=comp74104_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151263057	151263209	.	+	0	Parent=comp74104_c0_seq1.mrna1
Chr1	gffcl	locus	151310627	151311710	.	+	.	ID=RLOC_00012504;geneIDs=comp161131_c0_seq1.path1;transcripts=comp161131_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151310627	151311710	.	+	.	ID=comp161131_c0_seq1.mrna1;geneID=comp161131_c0_seq1.path1;Name=comp161131_c0_seq1;Dir=indeterminatecoverage=99.8;identity=86.7;matches=1019;mismatches=59;indels=97;unknowns=0;Target=comp161131_c0_seq1 1171 3 .;CDS_Target=comp161131_c0_seq1 511 425 .;locus=RLOC_00012504
Chr1	stalkie_big_nohaplotig	exon	151310627	151311710	86	+	.	Parent=comp161131_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151311033	151311119	.	+	0	Parent=comp161131_c0_seq1.mrna1
Chr1	gffcl	locus	151325621	151335285	.	+	.	ID=RLOC_00012505;geneIDs=FBgn0004456.1.path1;transcripts=FBgn0004456.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151325621	151335285	.	+	.	ID=FBgn0004456.1.mrna1;geneID=FBgn0004456.1.path1;Name=FBgn0004456.1;Dir=sensecoverage=87.4;identity=98.7;matches=2977;mismatches=40;indels=0;unknowns=0;locus=RLOC_00012505
Chr1	stalkie_big_nohaplotig	exon	151325621	151325727	98	+	.	Parent=FBgn0004456.1.mrna1;Target=FBgn0004456.1 437 543 +
Chr1	stalkie_big_nohaplotig	exon	151327090	151327223	99	+	.	Parent=FBgn0004456.1.mrna1;Target=FBgn0004456.1 544 677 +
Chr1	stalkie_big_nohaplotig	exon	151332051	151332262	99	+	.	Parent=FBgn0004456.1.mrna1;Target=FBgn0004456.1 678 889 +
Chr1	stalkie_big_nohaplotig	exon	151332396	151333574	98	+	.	Parent=FBgn0004456.1.mrna1;Target=FBgn0004456.1 890 2068 +
Chr1	stalkie_big_nohaplotig	exon	151333634	151333776	99	+	.	Parent=FBgn0004456.1.mrna1;Target=FBgn0004456.1 2069 2211 +
Chr1	stalkie_big_nohaplotig	exon	151333842	151334186	98	+	.	Parent=FBgn0004456.1.mrna1;Target=FBgn0004456.1 2212 2556 +
Chr1	stalkie_big_nohaplotig	exon	151334320	151334979	98	+	.	Parent=FBgn0004456.1.mrna1;Target=FBgn0004456.1 2557 3216 +
Chr1	stalkie_big_nohaplotig	exon	151335049	151335285	98	+	.	Parent=FBgn0004456.1.mrna1;Target=FBgn0004456.1 3217 3453 +
Chr1	stalkie_big_nohaplotig	CDS	151325623	151325727	.	+	0	Parent=FBgn0004456.1.mrna1;Target=FBgn0004456.1 439 543 +
Chr1	stalkie_big_nohaplotig	CDS	151327090	151327223	.	+	0	Parent=FBgn0004456.1.mrna1;Target=FBgn0004456.1 544 677 +
Chr1	stalkie_big_nohaplotig	CDS	151332051	151332262	.	+	1	Parent=FBgn0004456.1.mrna1;Target=FBgn0004456.1 678 889 +
Chr1	stalkie_big_nohaplotig	CDS	151332396	151333574	.	+	2	Parent=FBgn0004456.1.mrna1;Target=FBgn0004456.1 890 2068 +
Chr1	stalkie_big_nohaplotig	CDS	151333634	151333776	.	+	2	Parent=FBgn0004456.1.mrna1;Target=FBgn0004456.1 2069 2211 +
Chr1	stalkie_big_nohaplotig	CDS	151333842	151334186	.	+	0	Parent=FBgn0004456.1.mrna1;Target=FBgn0004456.1 2212 2556 +
Chr1	stalkie_big_nohaplotig	CDS	151334320	151334979	.	+	0	Parent=FBgn0004456.1.mrna1;Target=FBgn0004456.1 2557 3216 +
Chr1	stalkie_big_nohaplotig	CDS	151335049	151335285	.	+	0	Parent=FBgn0004456.1.mrna1;Target=FBgn0004456.1 3217 3453 +
Chr1	gffcl	locus	151336977	151337340	.	+	.	ID=RLOC_00012506;geneIDs=comp112904_c0_seq1.path1;transcripts=comp112904_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151336977	151337340	.	+	.	ID=comp112904_c0_seq1.mrna1;geneID=comp112904_c0_seq1.path1;Name=comp112904_c0_seq1;Dir=antisensecoverage=88.6;identity=96.5;matches=301;mismatches=11;indels=0;unknowns=0;Target=comp112904_c0_seq1 150 227 .;locus=RLOC_00012506
Chr1	stalkie_big_nohaplotig	exon	151336977	151337056	91	+	.	Parent=comp112904_c0_seq1.mrna1;Target=comp112904_c0_seq1 233 312 -
Chr1	stalkie_big_nohaplotig	exon	151337109	151337340	98	+	.	Parent=comp112904_c0_seq1.mrna1;Target=comp112904_c0_seq1 1 232 -
Chr1	stalkie_big_nohaplotig	CDS	151337114	151337191	.	+	0	Parent=comp112904_c0_seq1.mrna1
Chr1	gffcl	locus	151339083	151340084	.	+	.	ID=RLOC_00012507;geneIDs=ORF1758.path1;transcripts=ORF1758.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151339083	151340084	.	+	.	ID=ORF1758.mrna1;geneID=ORF1758.path1;Name=ORF1758;Dir=indeterminatecoverage=100.0;identity=98.8;matches=990;mismatches=12;indels=0;unknowns=0;Target=ORF1758 1002 1 .;locus=RLOC_00012507
Chr1	stalkie_big_nohaplotig	exon	151339083	151340084	98	+	.	Parent=ORF1758.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151339083	151340084	.	+	0	Parent=ORF1758.mrna1
Chr1	gffcl	locus	151341591	151342515	.	-	.	ID=RLOC_00012508;geneIDs=FBgn0029133.1.path1;transcripts=FBgn0029133.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151341591	151342515	.	-	.	ID=FBgn0029133.1.mrna1;geneID=FBgn0029133.1.path1;Name=FBgn0029133.1;Dir=sensecoverage=100.0;identity=99.2;matches=789;mismatches=6;indels=0;unknowns=0;locus=RLOC_00012508
Chr1	stalkie_big_nohaplotig	exon	151341591	151341955	98	-	.	Parent=FBgn0029133.1.mrna1;Target=FBgn0029133.1 431 795 +
Chr1	stalkie_big_nohaplotig	exon	151342020	151342380	99	-	.	Parent=FBgn0029133.1.mrna1;Target=FBgn0029133.1 70 430 +
Chr1	stalkie_big_nohaplotig	exon	151342447	151342515	100	-	.	Parent=FBgn0029133.1.mrna1;Target=FBgn0029133.1 1 69 +
Chr1	stalkie_big_nohaplotig	CDS	151341591	151341955	.	-	2	Parent=FBgn0029133.1.mrna1;Target=FBgn0029133.1 431 795 +
Chr1	stalkie_big_nohaplotig	CDS	151342020	151342380	.	-	0	Parent=FBgn0029133.1.mrna1;Target=FBgn0029133.1 70 430 +
Chr1	stalkie_big_nohaplotig	CDS	151342447	151342515	.	-	0	Parent=FBgn0029133.1.mrna1;Target=FBgn0029133.1 1 69 +
Chr1	gffcl	locus	151372727	151386447	.	-	.	ID=RLOC_00012509;geneIDs=FBgn0029930.1.path1;transcripts=FBgn0029930.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151372727	151386447	.	-	.	ID=FBgn0029930.1.mrna1;geneID=FBgn0029930.1.path1;Name=FBgn0029930.1;Dir=sensecoverage=97.0;identity=99.5;matches=646;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012509
Chr1	stalkie_big_nohaplotig	exon	151372727	151372884	98	-	.	Parent=FBgn0029930.1.mrna1;Target=FBgn0029930.1 512 669 +
Chr1	stalkie_big_nohaplotig	exon	151380648	151380738	100	-	.	Parent=FBgn0029930.1.mrna1;Target=FBgn0029930.1 421 511 +
Chr1	stalkie_big_nohaplotig	exon	151380867	151381060	100	-	.	Parent=FBgn0029930.1.mrna1;Target=FBgn0029930.1 227 420 +
Chr1	stalkie_big_nohaplotig	exon	151386169	151386312	100	-	.	Parent=FBgn0029930.1.mrna1;Target=FBgn0029930.1 83 226 +
Chr1	stalkie_big_nohaplotig	exon	151386386	151386447	100	-	.	Parent=FBgn0029930.1.mrna1;Target=FBgn0029930.1 21 82 +
Chr1	stalkie_big_nohaplotig	CDS	151372727	151372884	.	-	2	Parent=FBgn0029930.1.mrna1;Target=FBgn0029930.1 512 669 +
Chr1	stalkie_big_nohaplotig	CDS	151380648	151380738	.	-	0	Parent=FBgn0029930.1.mrna1;Target=FBgn0029930.1 421 511 +
Chr1	stalkie_big_nohaplotig	CDS	151380867	151381060	.	-	2	Parent=FBgn0029930.1.mrna1;Target=FBgn0029930.1 227 420 +
Chr1	stalkie_big_nohaplotig	CDS	151386169	151386312	.	-	2	Parent=FBgn0029930.1.mrna1;Target=FBgn0029930.1 83 226 +
Chr1	stalkie_big_nohaplotig	CDS	151386386	151386446	.	-	0	Parent=FBgn0029930.1.mrna1;Target=FBgn0029930.1 22 82 +
Chr1	gffcl	locus	151465411	151465929	.	-	.	ID=RLOC_00012510;geneIDs=comp151641_c0_seq1.path1;transcripts=comp151641_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151465411	151465929	.	-	.	ID=comp151641_c0_seq1.mrna1;geneID=comp151641_c0_seq1.path1;Name=comp151641_c0_seq1;Dir=indeterminatecoverage=93.5;identity=96.0;matches=505;mismatches=10;indels=11;unknowns=0;Target=comp151641_c0_seq1 558 37 .;CDS_Target=comp151641_c0_seq1 413 330 .;locus=RLOC_00012510
Chr1	stalkie_big_nohaplotig	exon	151465411	151465929	96	-	.	Parent=comp151641_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151465555	151465638	.	-	0	Parent=comp151641_c0_seq1.mrna1
Chr1	gffcl	locus	151470029	151473697	.	-	.	ID=RLOC_00012512;geneIDs=FBgn0032295.5.path1;transcripts=FBgn0032295.5.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151470029	151473697	.	-	.	ID=FBgn0032295.5.mrna1;geneID=FBgn0032295.5.path1;Name=FBgn0032295.5;Dir=sensecoverage=100.0;identity=99.3;matches=1967;mismatches=13;indels=0;unknowns=0;locus=RLOC_00012512
Chr1	stalkie_big_nohaplotig	exon	151470029	151470260	99	-	.	Parent=FBgn0032295.5.mrna1;Target=FBgn0032295.5 1749 1980 +
Chr1	stalkie_big_nohaplotig	exon	151470335	151470690	99	-	.	Parent=FBgn0032295.5.mrna1;Target=FBgn0032295.5 1393 1748 +
Chr1	stalkie_big_nohaplotig	exon	151470746	151471767	99	-	.	Parent=FBgn0032295.5.mrna1;Target=FBgn0032295.5 371 1392 +
Chr1	stalkie_big_nohaplotig	exon	151472372	151472633	99	-	.	Parent=FBgn0032295.5.mrna1;Target=FBgn0032295.5 109 370 +
Chr1	stalkie_big_nohaplotig	exon	151473590	151473697	100	-	.	Parent=FBgn0032295.5.mrna1;Target=FBgn0032295.5 1 108 +
Chr1	stalkie_big_nohaplotig	CDS	151470029	151470260	.	-	1	Parent=FBgn0032295.5.mrna1;Target=FBgn0032295.5 1749 1980 +
Chr1	stalkie_big_nohaplotig	CDS	151470335	151470690	.	-	0	Parent=FBgn0032295.5.mrna1;Target=FBgn0032295.5 1393 1748 +
Chr1	stalkie_big_nohaplotig	CDS	151470746	151471767	.	-	2	Parent=FBgn0032295.5.mrna1;Target=FBgn0032295.5 371 1392 +
Chr1	stalkie_big_nohaplotig	CDS	151472372	151472633	.	-	0	Parent=FBgn0032295.5.mrna1;Target=FBgn0032295.5 109 370 +
Chr1	stalkie_big_nohaplotig	CDS	151473590	151473697	.	-	0	Parent=FBgn0032295.5.mrna1;Target=FBgn0032295.5 1 108 +
Chr1	gffcl	locus	151474261	151474803	.	-	.	ID=RLOC_00012513;geneIDs=FBgn0030545.1.path1;transcripts=FBgn0030545.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151474261	151474803	.	-	.	ID=FBgn0030545.1.mrna1;geneID=FBgn0030545.1.path1;Name=FBgn0030545.1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=541;mismatches=2;indels=6;unknowns=0;Target=FBgn0030545.1 549 1 .;locus=RLOC_00012513
Chr1	stalkie_big_nohaplotig	exon	151474261	151474803	98	-	.	Parent=FBgn0030545.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151474261	151474803	.	-	0	Parent=FBgn0030545.1.mrna1
Chr1	gffcl	locus	151477151	151479959	.	+	.	ID=RLOC_00012514;geneIDs=FBgn0031005.1.path1;transcripts=FBgn0031005.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151477151	151479959	.	+	.	ID=FBgn0031005.1.mrna1;geneID=FBgn0031005.1.path1;Name=FBgn0031005.1;Dir=sensecoverage=100.0;identity=99.3;matches=1108;mismatches=8;indels=0;unknowns=0;locus=RLOC_00012514
Chr1	stalkie_big_nohaplotig	exon	151477151	151477288	99	+	.	Parent=FBgn0031005.1.mrna1;Target=FBgn0031005.1 1 138 +
Chr1	stalkie_big_nohaplotig	exon	151477375	151477847	99	+	.	Parent=FBgn0031005.1.mrna1;Target=FBgn0031005.1 139 611 +
Chr1	stalkie_big_nohaplotig	exon	151479455	151479959	99	+	.	Parent=FBgn0031005.1.mrna1;Target=FBgn0031005.1 612 1116 +
Chr1	stalkie_big_nohaplotig	CDS	151477151	151477288	.	+	0	Parent=FBgn0031005.1.mrna1;Target=FBgn0031005.1 1 138 +
Chr1	stalkie_big_nohaplotig	CDS	151477375	151477847	.	+	0	Parent=FBgn0031005.1.mrna1;Target=FBgn0031005.1 139 611 +
Chr1	stalkie_big_nohaplotig	CDS	151479455	151479959	.	+	1	Parent=FBgn0031005.1.mrna1;Target=FBgn0031005.1 612 1116 +
Chr1	gffcl	locus	151480805	151481133	.	+	.	ID=RLOC_00012515;geneIDs=comp104293_c0_seq1.path1;transcripts=comp104293_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151480805	151481133	.	+	.	ID=comp104293_c0_seq1.mrna1;geneID=comp104293_c0_seq1.path1;Name=comp104293_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=328;mismatches=1;indels=0;unknowns=0;Target=comp104293_c0_seq1 329 1 .;CDS_Target=comp104293_c0_seq1 89 3 .;locus=RLOC_00012515
Chr1	stalkie_big_nohaplotig	exon	151480805	151481133	99	+	.	Parent=comp104293_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151480807	151480893	.	+	0	Parent=comp104293_c0_seq1.mrna1
Chr1	gffcl	locus	151484436	151485081	.	-	.	ID=RLOC_00012516;geneIDs=comp155903_c0_seq1.path1;transcripts=comp155903_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151484436	151485081	.	-	.	ID=comp155903_c0_seq1.mrna1;geneID=comp155903_c0_seq1.path1;Name=comp155903_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.5;matches=630;mismatches=14;indels=16;unknowns=0;Target=comp155903_c0_seq1 658 1 .;CDS_Target=comp155903_c0_seq1 120 70 .;locus=RLOC_00012516
Chr1	stalkie_big_nohaplotig	exon	151484436	151485081	95	-	.	Parent=comp155903_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151484962	151485012	.	-	0	Parent=comp155903_c0_seq1.mrna1
Chr1	gffcl	locus	151490806	151516796	.	-	.	ID=RLOC_00012517;geneIDs=FBgn0031006.1.path1;transcripts=FBgn0031006.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151490806	151516796	.	-	.	ID=FBgn0031006.1.mrna1;geneID=FBgn0031006.1.path1;Name=FBgn0031006.1;Dir=sensecoverage=100.0;identity=99.6;matches=4074;mismatches=17;indels=1;unknowns=0;locus=RLOC_00012517
Chr1	stalkie_big_nohaplotig	exon	151490806	151490875	98	-	.	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 4022 4092 +
Chr1	stalkie_big_nohaplotig	exon	151490928	151491022	100	-	.	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 3927 4021 +
Chr1	stalkie_big_nohaplotig	exon	151491105	151491383	99	-	.	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 3648 3926 +
Chr1	stalkie_big_nohaplotig	exon	151491447	151491688	100	-	.	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 3406 3647 +
Chr1	stalkie_big_nohaplotig	exon	151492150	151492430	100	-	.	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 3125 3405 +
Chr1	stalkie_big_nohaplotig	exon	151492495	151492619	100	-	.	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 3000 3124 +
Chr1	stalkie_big_nohaplotig	exon	151492684	151493016	100	-	.	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 2667 2999 +
Chr1	stalkie_big_nohaplotig	exon	151493181	151493344	98	-	.	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 2503 2666 +
Chr1	stalkie_big_nohaplotig	exon	151493409	151493703	98	-	.	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 2208 2502 +
Chr1	stalkie_big_nohaplotig	exon	151493771	151493979	100	-	.	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 1999 2207 +
Chr1	stalkie_big_nohaplotig	exon	151494034	151494530	99	-	.	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 1502 1998 +
Chr1	stalkie_big_nohaplotig	exon	151494607	151494810	100	-	.	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 1298 1501 +
Chr1	stalkie_big_nohaplotig	exon	151495327	151495531	99	-	.	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 1093 1297 +
Chr1	stalkie_big_nohaplotig	exon	151495593	151495697	100	-	.	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 988 1092 +
Chr1	stalkie_big_nohaplotig	exon	151495765	151495918	97	-	.	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 834 987 +
Chr1	stalkie_big_nohaplotig	exon	151496675	151497033	99	-	.	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 475 833 +
Chr1	stalkie_big_nohaplotig	exon	151497099	151497285	100	-	.	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 288 474 +
Chr1	stalkie_big_nohaplotig	exon	151497380	151497605	99	-	.	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 62 287 +
Chr1	stalkie_big_nohaplotig	exon	151516736	151516796	100	-	.	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 1 61 +
Chr1	stalkie_big_nohaplotig	CDS	151490806	151490875	.	-	2	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 4022 4092 +
Chr1	stalkie_big_nohaplotig	CDS	151490928	151491022	.	-	1	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 3927 4021 +
Chr1	stalkie_big_nohaplotig	CDS	151491105	151491383	.	-	1	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 3648 3926 +
Chr1	stalkie_big_nohaplotig	CDS	151491447	151491688	.	-	0	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 3406 3647 +
Chr1	stalkie_big_nohaplotig	CDS	151492150	151492430	.	-	2	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 3125 3405 +
Chr1	stalkie_big_nohaplotig	CDS	151492495	151492619	.	-	1	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 3000 3124 +
Chr1	stalkie_big_nohaplotig	CDS	151492684	151493016	.	-	1	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 2667 2999 +
Chr1	stalkie_big_nohaplotig	CDS	151493181	151493344	.	-	0	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 2503 2666 +
Chr1	stalkie_big_nohaplotig	CDS	151493409	151493703	.	-	1	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 2208 2502 +
Chr1	stalkie_big_nohaplotig	CDS	151493771	151493979	.	-	0	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 1999 2207 +
Chr1	stalkie_big_nohaplotig	CDS	151494034	151494530	.	-	2	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 1502 1998 +
Chr1	stalkie_big_nohaplotig	CDS	151494607	151494810	.	-	2	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 1298 1501 +
Chr1	stalkie_big_nohaplotig	CDS	151495327	151495531	.	-	0	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 1093 1297 +
Chr1	stalkie_big_nohaplotig	CDS	151495593	151495697	.	-	0	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 988 1092 +
Chr1	stalkie_big_nohaplotig	CDS	151495765	151495918	.	-	1	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 834 987 +
Chr1	stalkie_big_nohaplotig	CDS	151496675	151497033	.	-	0	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 475 833 +
Chr1	stalkie_big_nohaplotig	CDS	151497099	151497285	.	-	1	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 288 474 +
Chr1	stalkie_big_nohaplotig	CDS	151497380	151497605	.	-	2	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 62 287 +
Chr1	stalkie_big_nohaplotig	CDS	151516736	151516796	.	-	0	Parent=FBgn0031006.1.mrna1;Target=FBgn0031006.1 1 61 +
Chr1	gffcl	locus	151503011	151503359	.	+	.	ID=RLOC_00012518;geneIDs=comp1104398_c0_seq1.path1;transcripts=comp1104398_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151503011	151503359	.	+	.	ID=comp1104398_c0_seq1.mrna1;geneID=comp1104398_c0_seq1.path1;Name=comp1104398_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.4;matches=347;mismatches=2;indels=0;unknowns=0;Target=comp1104398_c0_seq1 350 2 .;CDS_Target=comp1104398_c0_seq1 137 42 .;locus=RLOC_00012518
Chr1	stalkie_big_nohaplotig	exon	151503011	151503359	99	+	.	Parent=comp1104398_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151503051	151503146	.	+	0	Parent=comp1104398_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151571333	151573802	.	+	.	ID=FBgn0261793.1.mrna1;geneID=FBgn0261793.1.path1;Name=FBgn0261793.1;Dir=sensecoverage=100.0;identity=99.3;matches=1865;mismatches=7;indels=6;unknowns=0;locus=RLOC_00012519
Chr1	stalkie_big_nohaplotig	exon	151571333	151572529	98	+	.	Parent=FBgn0261793.1.mrna1;Target=FBgn0261793.1 1 1191 +
Chr1	stalkie_big_nohaplotig	exon	151572594	151572846	100	+	.	Parent=FBgn0261793.1.mrna1;Target=FBgn0261793.1 1192 1444 +
Chr1	stalkie_big_nohaplotig	exon	151573375	151573802	100	+	.	Parent=FBgn0261793.1.mrna1;Target=FBgn0261793.1 1445 1872 +
Chr1	stalkie_big_nohaplotig	CDS	151571333	151572529	.	+	0	Parent=FBgn0261793.1.mrna1;Target=FBgn0261793.1 1 1191 +
Chr1	stalkie_big_nohaplotig	CDS	151572594	151572846	.	+	0	Parent=FBgn0261793.1.mrna1;Target=FBgn0261793.1 1192 1444 +
Chr1	stalkie_big_nohaplotig	CDS	151573375	151573802	.	+	2	Parent=FBgn0261793.1.mrna1;Target=FBgn0261793.1 1445 1872 +
Chr1	gffcl	locus	151520818	151521347	.	+	.	ID=RLOC_00012520;geneIDs=comp154130_c1_seq1.path1;transcripts=comp154130_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151520818	151521347	.	+	.	ID=comp154130_c1_seq1.mrna1;geneID=comp154130_c1_seq1.path1;Name=comp154130_c1_seq1;Dir=indeterminatecoverage=98.3;identity=97.9;matches=519;mismatches=9;indels=2;unknowns=0;Target=comp154130_c1_seq1 529 2 .;CDS_Target=comp154130_c1_seq1 433 362 .;locus=RLOC_00012520
Chr1	stalkie_big_nohaplotig	exon	151520818	151521347	97	+	.	Parent=comp154130_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151521180	151521251	.	+	0	Parent=comp154130_c1_seq1.mrna1
Chr1	gffcl	locus	151576404	151577192	.	+	.	ID=RLOC_00012521;geneIDs=comp70467_c0_seq1.path1;transcripts=comp70467_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151576404	151577192	.	+	.	ID=comp70467_c0_seq1.mrna1;geneID=comp70467_c0_seq1.path1;Name=comp70467_c0_seq1;Dir=indeterminatecoverage=97.3;identity=97.0;matches=775;mismatches=6;indels=18;unknowns=0;Target=comp70467_c0_seq1 798 8 .;CDS_Target=comp70467_c0_seq1 574 512 .;locus=RLOC_00012521
Chr1	stalkie_big_nohaplotig	exon	151576404	151577192	96	+	.	Parent=comp70467_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151576899	151576960	.	+	0	Parent=comp70467_c0_seq1.mrna1
Chr1	gffcl	locus	151577537	151579123	.	-	.	ID=RLOC_00012522;geneIDs=comp242608_c0_seq1.path1,comp924941_c0_seq1.path1;transcripts=comp242608_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151577784	151579123	.	-	.	ID=comp242608_c0_seq1.mrna1;geneID=comp242608_c0_seq1.path1;Name=comp242608_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=876;mismatches=1;indels=12;unknowns=0;locus=RLOC_00012522
Chr1	stalkie_big_nohaplotig	exon	151577784	151578029	100	-	.	Parent=comp242608_c0_seq1.mrna1;Target=comp242608_c0_seq1 877 632 .
Chr1	stalkie_big_nohaplotig	exon	151578481	151579123	97	-	.	Parent=comp242608_c0_seq1.mrna1;Target=comp242608_c0_seq1 631 1 .
Chr1	stalkie_big_nohaplotig	CDS	151577955	151578029	.	-	0	Parent=comp242608_c0_seq1.mrna1;Target=comp242608_c0_seq1 706 632 .
Chr1	stalkie_big_nohaplotig	CDS	151578481	151578585	.	-	0	Parent=comp242608_c0_seq1.mrna1;Target=comp242608_c0_seq1 631 527 .
Chr1	gffcl	locus	151580344	151580791	.	-	.	ID=RLOC_00012523;geneIDs=FBgn0086447.1.path1;transcripts=FBgn0086447.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151580344	151580791	.	-	.	ID=FBgn0086447.1.mrna1;geneID=FBgn0086447.1.path1;Name=FBgn0086447.1;Dir=sensecoverage=98.7;identity=99.2;matches=391;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012523
Chr1	stalkie_big_nohaplotig	exon	151580344	151580653	99	-	.	Parent=FBgn0086447.1.mrna1;Target=FBgn0086447.1 85 394 +
Chr1	stalkie_big_nohaplotig	exon	151580708	151580791	98	-	.	Parent=FBgn0086447.1.mrna1;Target=FBgn0086447.1 1 84 +
Chr1	stalkie_big_nohaplotig	CDS	151580345	151580653	.	-	0	Parent=FBgn0086447.1.mrna1;Target=FBgn0086447.1 85 393 +
Chr1	stalkie_big_nohaplotig	CDS	151580708	151580791	.	-	0	Parent=FBgn0086447.1.mrna1;Target=FBgn0086447.1 1 84 +
Chr1	gffcl	locus	151585276	151586049	.	-	.	ID=RLOC_00012525;geneIDs=FBgn0064116.1.path1;transcripts=FBgn0064116.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151585276	151586049	.	-	.	ID=FBgn0064116.1.mrna1;geneID=FBgn0064116.1.path1;Name=FBgn0064116.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=772;mismatches=2;indels=0;unknowns=0;Target=FBgn0064116.1 774 1 .;locus=RLOC_00012525
Chr1	stalkie_big_nohaplotig	exon	151585276	151586049	99	-	.	Parent=FBgn0064116.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151585276	151586049	.	-	0	Parent=FBgn0064116.1.mrna1
Chr1	gffcl	locus	151586124	151586372	.	-	.	ID=RLOC_00012526;geneIDs=FBgn0064117.1.path1;transcripts=FBgn0064117.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151586124	151586372	.	-	.	ID=FBgn0064117.1.mrna1;geneID=FBgn0064117.1.path1;Name=FBgn0064117.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=248;mismatches=1;indels=0;unknowns=0;Target=FBgn0064117.1 249 1 .;locus=RLOC_00012526
Chr1	stalkie_big_nohaplotig	exon	151586124	151586372	99	-	.	Parent=FBgn0064117.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151586124	151586372	.	-	0	Parent=FBgn0064117.1.mrna1
Chr1	gffcl	locus	151595336	151604242	.	+	.	ID=RLOC_00012527;geneIDs=FBgn0031171.2.path1;transcripts=FBgn0031171.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151595336	151604242	.	+	.	ID=FBgn0031171.2.mrna1;geneID=FBgn0031171.2.path1;Name=FBgn0031171.2;Dir=sensecoverage=100.0;identity=99.7;matches=3511;mismatches=10;indels=1;unknowns=0;Target=FBgn0031171.2 3 128 +;locus=RLOC_00012527
Chr1	stalkie_big_nohaplotig	exon	151595336	151596156	99	+	.	Parent=FBgn0031171.2.mrna1;Target=FBgn0031171.2 1 822 +
Chr1	stalkie_big_nohaplotig	exon	151596243	151596516	99	+	.	Parent=FBgn0031171.2.mrna1;Target=FBgn0031171.2 823 1096 +
Chr1	stalkie_big_nohaplotig	exon	151598471	151598984	99	+	.	Parent=FBgn0031171.2.mrna1;Target=FBgn0031171.2 1097 1610 +
Chr1	stalkie_big_nohaplotig	exon	151599060	151599400	99	+	.	Parent=FBgn0031171.2.mrna1;Target=FBgn0031171.2 1611 1951 +
Chr1	stalkie_big_nohaplotig	exon	151599471	151599596	100	+	.	Parent=FBgn0031171.2.mrna1;Target=FBgn0031171.2 1952 2077 +
Chr1	stalkie_big_nohaplotig	exon	151600803	151601012	99	+	.	Parent=FBgn0031171.2.mrna1;Target=FBgn0031171.2 2078 2287 +
Chr1	stalkie_big_nohaplotig	exon	151601100	151601238	100	+	.	Parent=FBgn0031171.2.mrna1;Target=FBgn0031171.2 2288 2426 +
Chr1	stalkie_big_nohaplotig	exon	151602188	151602370	99	+	.	Parent=FBgn0031171.2.mrna1;Target=FBgn0031171.2 2427 2609 +
Chr1	stalkie_big_nohaplotig	exon	151602436	151603095	99	+	.	Parent=FBgn0031171.2.mrna1;Target=FBgn0031171.2 2610 3269 +
Chr1	stalkie_big_nohaplotig	exon	151603922	151603987	100	+	.	Parent=FBgn0031171.2.mrna1;Target=FBgn0031171.2 3270 3335 +
Chr1	stalkie_big_nohaplotig	exon	151604056	151604242	98	+	.	Parent=FBgn0031171.2.mrna1;Target=FBgn0031171.2 3336 3522 +
Chr1	stalkie_big_nohaplotig	CDS	151595338	151595462	.	+	0	Parent=FBgn0031171.2.mrna1
Chr1	gffcl	locus	151607151	151616734	.	+	.	ID=RLOC_00012528;geneIDs=FBgn0031171.1.path1;transcripts=FBgn0031171.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151607151	151616734	.	+	.	ID=FBgn0031171.1.mrna1;geneID=FBgn0031171.1.path1;Name=FBgn0031171.1;Dir=sensecoverage=99.9;identity=99.7;matches=4896;mismatches=16;indels=0;unknowns=0;locus=RLOC_00012528
Chr1	stalkie_big_nohaplotig	exon	151607151	151607392	99	+	.	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 4 245 +
Chr1	stalkie_big_nohaplotig	exon	151607454	151608039	99	+	.	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 246 831 +
Chr1	stalkie_big_nohaplotig	exon	151608896	151609045	100	+	.	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 832 981 +
Chr1	stalkie_big_nohaplotig	exon	151609110	151610339	99	+	.	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 982 2211 +
Chr1	stalkie_big_nohaplotig	exon	151610735	151611008	99	+	.	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 2212 2485 +
Chr1	stalkie_big_nohaplotig	exon	151611266	151611782	100	+	.	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 2486 3002 +
Chr1	stalkie_big_nohaplotig	exon	151611868	151612208	99	+	.	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 3003 3343 +
Chr1	stalkie_big_nohaplotig	exon	151612272	151612397	100	+	.	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 3344 3469 +
Chr1	stalkie_big_nohaplotig	exon	151613504	151613716	99	+	.	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 3470 3682 +
Chr1	stalkie_big_nohaplotig	exon	151613773	151613911	99	+	.	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 3683 3821 +
Chr1	stalkie_big_nohaplotig	exon	151614249	151614431	99	+	.	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 3822 4004 +
Chr1	stalkie_big_nohaplotig	exon	151614502	151615161	99	+	.	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 4005 4664 +
Chr1	stalkie_big_nohaplotig	exon	151616425	151616490	100	+	.	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 4665 4730 +
Chr1	stalkie_big_nohaplotig	exon	151616550	151616734	98	+	.	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 4731 4915 +
Chr1	stalkie_big_nohaplotig	CDS	151607151	151607392	.	+	0	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 4 245 +
Chr1	stalkie_big_nohaplotig	CDS	151607454	151608039	.	+	1	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 246 831 +
Chr1	stalkie_big_nohaplotig	CDS	151608896	151609045	.	+	0	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 832 981 +
Chr1	stalkie_big_nohaplotig	CDS	151609110	151610339	.	+	0	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 982 2211 +
Chr1	stalkie_big_nohaplotig	CDS	151610735	151611008	.	+	0	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 2212 2485 +
Chr1	stalkie_big_nohaplotig	CDS	151611266	151611782	.	+	2	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 2486 3002 +
Chr1	stalkie_big_nohaplotig	CDS	151611868	151612208	.	+	1	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 3003 3343 +
Chr1	stalkie_big_nohaplotig	CDS	151612272	151612397	.	+	2	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 3344 3469 +
Chr1	stalkie_big_nohaplotig	CDS	151613504	151613716	.	+	2	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 3470 3682 +
Chr1	stalkie_big_nohaplotig	CDS	151613773	151613911	.	+	2	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 3683 3821 +
Chr1	stalkie_big_nohaplotig	CDS	151614249	151614431	.	+	1	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 3822 4004 +
Chr1	stalkie_big_nohaplotig	CDS	151614502	151615161	.	+	1	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 4005 4664 +
Chr1	stalkie_big_nohaplotig	CDS	151616425	151616490	.	+	1	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 4665 4730 +
Chr1	stalkie_big_nohaplotig	CDS	151616550	151616733	.	+	1	Parent=FBgn0031171.1.mrna1;Target=FBgn0031171.1 4731 4914 +
Chr1	gffcl	locus	151639844	151645830	.	+	.	ID=RLOC_00012529;geneIDs=FBgn0031170.5.path1,comp161267_c2_seq1.path1;transcripts=FBgn0031170.5.mrna1,comp161267_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151639844	151645562	.	+	.	ID=FBgn0031170.5.mrna1;geneID=FBgn0031170.5.path1;Name=FBgn0031170.5;Dir=sensecoverage=100.0;identity=99.7;matches=4222;mismatches=13;indels=0;unknowns=1;locus=RLOC_00012529
Chr1	stalkie_big_nohaplotig	exon	151639844	151639909	100	+	.	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 1 66 +
Chr1	stalkie_big_nohaplotig	exon	151639976	151641256	99	+	.	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 67 1347 +
Chr1	stalkie_big_nohaplotig	exon	151641345	151641678	99	+	.	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 1348 1681 +
Chr1	stalkie_big_nohaplotig	exon	151641745	151642279	99	+	.	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 1682 2216 +
Chr1	stalkie_big_nohaplotig	exon	151642340	151642686	100	+	.	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 2217 2563 +
Chr1	stalkie_big_nohaplotig	exon	151642745	151642870	100	+	.	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 2564 2689 +
Chr1	stalkie_big_nohaplotig	exon	151643057	151643281	100	+	.	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 2690 2914 +
Chr1	stalkie_big_nohaplotig	exon	151643602	151643752	100	+	.	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 2915 3065 +
Chr1	stalkie_big_nohaplotig	exon	151643820	151643996	100	+	.	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 3066 3242 +
Chr1	stalkie_big_nohaplotig	exon	151644049	151644708	99	+	.	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 3243 3902 +
Chr1	stalkie_big_nohaplotig	exon	151644780	151644887	98	+	.	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 3903 4010 +
Chr1	stalkie_big_nohaplotig	exon	151644956	151645144	99	+	.	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 4011 4199 +
Chr1	stalkie_big_nohaplotig	exon	151645526	151645562	100	+	.	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 4200 4236 +
Chr1	stalkie_big_nohaplotig	CDS	151639844	151639909	.	+	0	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 1 66 +
Chr1	stalkie_big_nohaplotig	CDS	151639976	151641256	.	+	0	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 67 1347 +
Chr1	stalkie_big_nohaplotig	CDS	151641345	151641678	.	+	0	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 1348 1681 +
Chr1	stalkie_big_nohaplotig	CDS	151641745	151642279	.	+	2	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 1682 2216 +
Chr1	stalkie_big_nohaplotig	CDS	151642340	151642686	.	+	1	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 2217 2563 +
Chr1	stalkie_big_nohaplotig	CDS	151642745	151642870	.	+	2	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 2564 2689 +
Chr1	stalkie_big_nohaplotig	CDS	151643057	151643281	.	+	2	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 2690 2914 +
Chr1	stalkie_big_nohaplotig	CDS	151643602	151643752	.	+	2	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 2915 3065 +
Chr1	stalkie_big_nohaplotig	CDS	151643820	151643996	.	+	1	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 3066 3242 +
Chr1	stalkie_big_nohaplotig	CDS	151644049	151644708	.	+	1	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 3243 3902 +
Chr1	stalkie_big_nohaplotig	CDS	151644780	151644887	.	+	1	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 3903 4010 +
Chr1	stalkie_big_nohaplotig	CDS	151644956	151645144	.	+	1	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 4011 4199 +
Chr1	stalkie_big_nohaplotig	CDS	151645526	151645562	.	+	1	Parent=FBgn0031170.5.mrna1;Target=FBgn0031170.5 4200 4236 +
Chr1	stalkie_big_nohaplotig	mRNA	151639844	151645830	.	+	.	ID=comp161267_c2_seq1.mrna1;geneID=comp161267_c2_seq1.path1;Name=comp161267_c2_seq1;Dir=antisensecoverage=99.8;identity=99.5;matches=4860;mismatches=21;indels=4;unknowns=0;locus=RLOC_00012529
Chr1	stalkie_big_nohaplotig	exon	151639844	151639909	100	+	.	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 4827 4892 -
Chr1	stalkie_big_nohaplotig	exon	151639976	151641256	99	+	.	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 3546 4826 -
Chr1	stalkie_big_nohaplotig	exon	151641345	151641678	99	+	.	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 3212 3545 -
Chr1	stalkie_big_nohaplotig	exon	151641745	151642279	99	+	.	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 2677 3211 -
Chr1	stalkie_big_nohaplotig	exon	151642340	151642686	100	+	.	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 2330 2676 -
Chr1	stalkie_big_nohaplotig	exon	151642745	151642870	100	+	.	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 2204 2329 -
Chr1	stalkie_big_nohaplotig	exon	151643057	151643281	100	+	.	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 1979 2203 -
Chr1	stalkie_big_nohaplotig	exon	151643602	151643752	100	+	.	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 1828 1978 -
Chr1	stalkie_big_nohaplotig	exon	151643820	151643996	100	+	.	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 1651 1827 -
Chr1	stalkie_big_nohaplotig	exon	151644049	151644708	99	+	.	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 991 1650 -
Chr1	stalkie_big_nohaplotig	exon	151644780	151644887	98	+	.	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 883 990 -
Chr1	stalkie_big_nohaplotig	exon	151644956	151645830	98	+	.	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 12 882 -
Chr1	stalkie_big_nohaplotig	CDS	151639844	151639909	.	+	0	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 4827 4892 .
Chr1	stalkie_big_nohaplotig	CDS	151639976	151641256	.	+	0	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 3546 4826 .
Chr1	stalkie_big_nohaplotig	CDS	151641345	151641678	.	+	0	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 3212 3545 .
Chr1	stalkie_big_nohaplotig	CDS	151641745	151642279	.	+	2	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 2677 3211 .
Chr1	stalkie_big_nohaplotig	CDS	151642340	151642686	.	+	1	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 2330 2676 .
Chr1	stalkie_big_nohaplotig	CDS	151642745	151642870	.	+	2	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 2204 2329 .
Chr1	stalkie_big_nohaplotig	CDS	151643057	151643281	.	+	2	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 1979 2203 .
Chr1	stalkie_big_nohaplotig	CDS	151643602	151643752	.	+	2	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 1828 1978 .
Chr1	stalkie_big_nohaplotig	CDS	151643820	151643996	.	+	1	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 1651 1827 .
Chr1	stalkie_big_nohaplotig	CDS	151644049	151644708	.	+	1	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 991 1650 .
Chr1	stalkie_big_nohaplotig	CDS	151644780	151644887	.	+	1	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 883 990 .
Chr1	stalkie_big_nohaplotig	CDS	151644956	151645148	.	+	1	Parent=comp161267_c2_seq1.mrna1;Target=comp161267_c2_seq1 690 882 .
Chr1	gffcl	locus	151649331	151663504	.	+	.	ID=RLOC_00012530;geneIDs=FBgn0031170.8.path1;transcripts=FBgn0031170.8.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151649331	151663504	.	+	.	ID=FBgn0031170.8.mrna1;geneID=FBgn0031170.8.path1;Name=FBgn0031170.8;Dir=sensecoverage=100.0;identity=99.1;matches=4967;mismatches=46;indels=0;unknowns=0;locus=RLOC_00012530
Chr1	stalkie_big_nohaplotig	exon	151649331	151649527	98	+	.	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 1 197 +
Chr1	stalkie_big_nohaplotig	exon	151649829	151649836	75	+	.	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 198 205 +
Chr1	stalkie_big_nohaplotig	exon	151657127	151657701	98	+	.	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 206 780 +
Chr1	stalkie_big_nohaplotig	exon	151657765	151657908	100	+	.	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 781 924 +
Chr1	stalkie_big_nohaplotig	exon	151657967	151659244	99	+	.	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 925 2202 +
Chr1	stalkie_big_nohaplotig	exon	151659309	151659600	96	+	.	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 2203 2494 +
Chr1	stalkie_big_nohaplotig	exon	151659658	151660192	98	+	.	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 2495 3029 +
Chr1	stalkie_big_nohaplotig	exon	151660264	151660610	99	+	.	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 3030 3376 +
Chr1	stalkie_big_nohaplotig	exon	151661342	151661467	96	+	.	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 3377 3502 +
Chr1	stalkie_big_nohaplotig	exon	151661624	151661845	98	+	.	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 3503 3724 +
Chr1	stalkie_big_nohaplotig	exon	151661907	151662057	97	+	.	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 3725 3875 +
Chr1	stalkie_big_nohaplotig	exon	151662122	151662301	99	+	.	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 3876 4055 +
Chr1	stalkie_big_nohaplotig	exon	151662364	151663023	99	+	.	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 4056 4715 +
Chr1	stalkie_big_nohaplotig	exon	151663093	151663200	100	+	.	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 4716 4823 +
Chr1	stalkie_big_nohaplotig	exon	151663315	151663504	100	+	.	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 4824 5013 +
Chr1	stalkie_big_nohaplotig	CDS	151649331	151649527	.	+	0	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 1 197 +
Chr1	stalkie_big_nohaplotig	CDS	151649829	151649836	.	+	1	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 198 205 +
Chr1	stalkie_big_nohaplotig	CDS	151657127	151657701	.	+	2	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 206 780 +
Chr1	stalkie_big_nohaplotig	CDS	151657765	151657908	.	+	0	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 781 924 +
Chr1	stalkie_big_nohaplotig	CDS	151657967	151659244	.	+	0	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 925 2202 +
Chr1	stalkie_big_nohaplotig	CDS	151659309	151659600	.	+	0	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 2203 2494 +
Chr1	stalkie_big_nohaplotig	CDS	151659658	151660192	.	+	2	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 2495 3029 +
Chr1	stalkie_big_nohaplotig	CDS	151660264	151660610	.	+	1	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 3030 3376 +
Chr1	stalkie_big_nohaplotig	CDS	151661342	151661467	.	+	2	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 3377 3502 +
Chr1	stalkie_big_nohaplotig	CDS	151661624	151661845	.	+	2	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 3503 3724 +
Chr1	stalkie_big_nohaplotig	CDS	151661907	151662057	.	+	2	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 3725 3875 +
Chr1	stalkie_big_nohaplotig	CDS	151662122	151662301	.	+	1	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 3876 4055 +
Chr1	stalkie_big_nohaplotig	CDS	151662364	151663023	.	+	1	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 4056 4715 +
Chr1	stalkie_big_nohaplotig	CDS	151663093	151663200	.	+	1	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 4716 4823 +
Chr1	stalkie_big_nohaplotig	CDS	151663315	151663504	.	+	1	Parent=FBgn0031170.8.mrna1;Target=FBgn0031170.8 4824 5013 +
Chr1	gffcl	locus	151680503	151691226	.	-	.	ID=RLOC_00012531;geneIDs=FBgn0031170.3.path1;transcripts=FBgn0031170.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151680503	151691226	.	-	.	ID=FBgn0031170.3.mrna1;geneID=FBgn0031170.3.path1;Name=FBgn0031170.3;Dir=sensecoverage=100.0;identity=99.6;matches=5094;mismatches=21;indels=0;unknowns=0;locus=RLOC_00012531
Chr1	stalkie_big_nohaplotig	exon	151680503	151680695	99	-	.	Parent=FBgn0031170.3.mrna1;Target=FBgn0031170.3 4923 5115 +
Chr1	stalkie_big_nohaplotig	exon	151680797	151681516	99	-	.	Parent=FBgn0031170.3.mrna1;Target=FBgn0031170.3 4203 4922 +
Chr1	stalkie_big_nohaplotig	exon	151681723	151681923	100	-	.	Parent=FBgn0031170.3.mrna1;Target=FBgn0031170.3 4002 4202 +
Chr1	stalkie_big_nohaplotig	exon	151683521	151683671	100	-	.	Parent=FBgn0031170.3.mrna1;Target=FBgn0031170.3 3851 4001 +
Chr1	stalkie_big_nohaplotig	exon	151683740	151684093	100	-	.	Parent=FBgn0031170.3.mrna1;Target=FBgn0031170.3 3497 3850 +
Chr1	stalkie_big_nohaplotig	exon	151684164	151684510	100	-	.	Parent=FBgn0031170.3.mrna1;Target=FBgn0031170.3 3150 3496 +
Chr1	stalkie_big_nohaplotig	exon	151685227	151686068	99	-	.	Parent=FBgn0031170.3.mrna1;Target=FBgn0031170.3 2308 3149 +
Chr1	stalkie_big_nohaplotig	exon	151687648	151688913	99	-	.	Parent=FBgn0031170.3.mrna1;Target=FBgn0031170.3 1042 2307 +
Chr1	stalkie_big_nohaplotig	exon	151688992	151689135	99	-	.	Parent=FBgn0031170.3.mrna1;Target=FBgn0031170.3 898 1041 +
Chr1	stalkie_big_nohaplotig	exon	151690255	151690873	99	-	.	Parent=FBgn0031170.3.mrna1;Target=FBgn0031170.3 279 897 +
Chr1	stalkie_big_nohaplotig	exon	151690949	151691226	97	-	.	Parent=FBgn0031170.3.mrna1;Target=FBgn0031170.3 1 278 +
Chr1	stalkie_big_nohaplotig	CDS	151680503	151680695	.	-	1	Parent=FBgn0031170.3.mrna1;Target=FBgn0031170.3 4923 5115 +
Chr1	stalkie_big_nohaplotig	CDS	151680797	151681516	.	-	1	Parent=FBgn0031170.3.mrna1;Target=FBgn0031170.3 4203 4922 +
Chr1	stalkie_big_nohaplotig	CDS	151681723	151681923	.	-	1	Parent=FBgn0031170.3.mrna1;Target=FBgn0031170.3 4002 4202 +
Chr1	stalkie_big_nohaplotig	CDS	151683521	151683671	.	-	2	Parent=FBgn0031170.3.mrna1;Target=FBgn0031170.3 3851 4001 +
Chr1	stalkie_big_nohaplotig	CDS	151683740	151684093	.	-	2	Parent=FBgn0031170.3.mrna1;Target=FBgn0031170.3 3497 3850 +
Chr1	stalkie_big_nohaplotig	CDS	151684164	151684510	.	-	1	Parent=FBgn0031170.3.mrna1;Target=FBgn0031170.3 3150 3496 +
Chr1	stalkie_big_nohaplotig	CDS	151685227	151686068	.	-	0	Parent=FBgn0031170.3.mrna1;Target=FBgn0031170.3 2308 3149 +
Chr1	stalkie_big_nohaplotig	CDS	151687648	151688913	.	-	0	Parent=FBgn0031170.3.mrna1;Target=FBgn0031170.3 1042 2307 +
Chr1	stalkie_big_nohaplotig	CDS	151688992	151689135	.	-	0	Parent=FBgn0031170.3.mrna1;Target=FBgn0031170.3 898 1041 +
Chr1	stalkie_big_nohaplotig	CDS	151690255	151690873	.	-	1	Parent=FBgn0031170.3.mrna1;Target=FBgn0031170.3 279 897 +
Chr1	stalkie_big_nohaplotig	CDS	151690949	151691226	.	-	0	Parent=FBgn0031170.3.mrna1;Target=FBgn0031170.3 1 278 +
Chr1	gffcl	locus	151692464	151699293	.	-	.	ID=RLOC_00012532;geneIDs=FBgn0031170.4.path1;transcripts=FBgn0031170.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151692464	151699293	.	-	.	ID=FBgn0031170.4.mrna1;geneID=FBgn0031170.4.path1;Name=FBgn0031170.4;Dir=sensecoverage=100.0;identity=99.9;matches=5099;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012532
Chr1	stalkie_big_nohaplotig	exon	151692464	151692653	100	-	.	Parent=FBgn0031170.4.mrna1;Target=FBgn0031170.4 4917 5106 +
Chr1	stalkie_big_nohaplotig	exon	151692750	151693469	99	-	.	Parent=FBgn0031170.4.mrna1;Target=FBgn0031170.4 4197 4916 +
Chr1	stalkie_big_nohaplotig	exon	151693525	151693725	99	-	.	Parent=FBgn0031170.4.mrna1;Target=FBgn0031170.4 3996 4196 +
Chr1	stalkie_big_nohaplotig	exon	151693873	151694032	100	-	.	Parent=FBgn0031170.4.mrna1;Target=FBgn0031170.4 3836 3995 +
Chr1	stalkie_big_nohaplotig	exon	151694090	151694443	99	-	.	Parent=FBgn0031170.4.mrna1;Target=FBgn0031170.4 3482 3835 +
Chr1	stalkie_big_nohaplotig	exon	151694515	151694861	100	-	.	Parent=FBgn0031170.4.mrna1;Target=FBgn0031170.4 3135 3481 +
Chr1	stalkie_big_nohaplotig	exon	151695729	151696561	100	-	.	Parent=FBgn0031170.4.mrna1;Target=FBgn0031170.4 2302 3134 +
Chr1	stalkie_big_nohaplotig	exon	151696621	151697865	99	-	.	Parent=FBgn0031170.4.mrna1;Target=FBgn0031170.4 1057 2301 +
Chr1	stalkie_big_nohaplotig	exon	151697945	151698088	100	-	.	Parent=FBgn0031170.4.mrna1;Target=FBgn0031170.4 913 1056 +
Chr1	stalkie_big_nohaplotig	exon	151698313	151698946	100	-	.	Parent=FBgn0031170.4.mrna1;Target=FBgn0031170.4 279 912 +
Chr1	stalkie_big_nohaplotig	exon	151699016	151699293	100	-	.	Parent=FBgn0031170.4.mrna1;Target=FBgn0031170.4 1 278 +
Chr1	stalkie_big_nohaplotig	CDS	151692464	151692653	.	-	1	Parent=FBgn0031170.4.mrna1;Target=FBgn0031170.4 4917 5106 +
Chr1	stalkie_big_nohaplotig	CDS	151692750	151693469	.	-	1	Parent=FBgn0031170.4.mrna1;Target=FBgn0031170.4 4197 4916 +
Chr1	stalkie_big_nohaplotig	CDS	151693525	151693725	.	-	1	Parent=FBgn0031170.4.mrna1;Target=FBgn0031170.4 3996 4196 +
Chr1	stalkie_big_nohaplotig	CDS	151693873	151694032	.	-	2	Parent=FBgn0031170.4.mrna1;Target=FBgn0031170.4 3836 3995 +
Chr1	stalkie_big_nohaplotig	CDS	151694090	151694443	.	-	2	Parent=FBgn0031170.4.mrna1;Target=FBgn0031170.4 3482 3835 +
Chr1	stalkie_big_nohaplotig	CDS	151694515	151694861	.	-	1	Parent=FBgn0031170.4.mrna1;Target=FBgn0031170.4 3135 3481 +
Chr1	stalkie_big_nohaplotig	CDS	151695729	151696561	.	-	0	Parent=FBgn0031170.4.mrna1;Target=FBgn0031170.4 2302 3134 +
Chr1	stalkie_big_nohaplotig	CDS	151696621	151697865	.	-	0	Parent=FBgn0031170.4.mrna1;Target=FBgn0031170.4 1057 2301 +
Chr1	stalkie_big_nohaplotig	CDS	151697945	151698088	.	-	0	Parent=FBgn0031170.4.mrna1;Target=FBgn0031170.4 913 1056 +
Chr1	stalkie_big_nohaplotig	CDS	151698313	151698946	.	-	1	Parent=FBgn0031170.4.mrna1;Target=FBgn0031170.4 279 912 +
Chr1	stalkie_big_nohaplotig	CDS	151699016	151699293	.	-	0	Parent=FBgn0031170.4.mrna1;Target=FBgn0031170.4 1 278 +
Chr1	gffcl	locus	151700933	151707535	.	-	.	ID=RLOC_00012533;geneIDs=FBgn0031170.1.path1,comp160137_c0_seq1.path1;transcripts=comp160137_c0_seq1.mrna1,FBgn0031170.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151700933	151707379	.	-	.	ID=comp160137_c0_seq1.mrna1;geneID=comp160137_c0_seq1.path1;Name=comp160137_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=5190;mismatches=10;indels=0;unknowns=0;locus=RLOC_00012533
Chr1	stalkie_big_nohaplotig	exon	151700933	151701219	99	-	.	Parent=comp160137_c0_seq1.mrna1;Target=comp160137_c0_seq1 4914 5200 +
Chr1	stalkie_big_nohaplotig	exon	151701295	151702020	100	-	.	Parent=comp160137_c0_seq1.mrna1;Target=comp160137_c0_seq1 4188 4913 +
Chr1	stalkie_big_nohaplotig	exon	151702083	151702280	100	-	.	Parent=comp160137_c0_seq1.mrna1;Target=comp160137_c0_seq1 3990 4187 +
Chr1	stalkie_big_nohaplotig	exon	151702337	151702493	100	-	.	Parent=comp160137_c0_seq1.mrna1;Target=comp160137_c0_seq1 3833 3989 +
Chr1	stalkie_big_nohaplotig	exon	151702602	151702964	99	-	.	Parent=comp160137_c0_seq1.mrna1;Target=comp160137_c0_seq1 3470 3832 +
Chr1	stalkie_big_nohaplotig	exon	151703052	151703401	99	-	.	Parent=comp160137_c0_seq1.mrna1;Target=comp160137_c0_seq1 3120 3469 +
Chr1	stalkie_big_nohaplotig	exon	151703495	151704342	99	-	.	Parent=comp160137_c0_seq1.mrna1;Target=comp160137_c0_seq1 2272 3119 +
Chr1	stalkie_big_nohaplotig	exon	151704401	151705648	99	-	.	Parent=comp160137_c0_seq1.mrna1;Target=comp160137_c0_seq1 1024 2271 +
Chr1	stalkie_big_nohaplotig	exon	151705711	151705854	100	-	.	Parent=comp160137_c0_seq1.mrna1;Target=comp160137_c0_seq1 880 1023 +
Chr1	stalkie_big_nohaplotig	exon	151706501	151707379	99	-	.	Parent=comp160137_c0_seq1.mrna1;Target=comp160137_c0_seq1 1 879 +
Chr1	stalkie_big_nohaplotig	CDS	151701057	151701219	.	-	1	Parent=comp160137_c0_seq1.mrna1;Target=comp160137_c0_seq1 4914 5076 +
Chr1	stalkie_big_nohaplotig	CDS	151701295	151702020	.	-	1	Parent=comp160137_c0_seq1.mrna1;Target=comp160137_c0_seq1 4188 4913 +
Chr1	stalkie_big_nohaplotig	CDS	151702083	151702280	.	-	1	Parent=comp160137_c0_seq1.mrna1;Target=comp160137_c0_seq1 3990 4187 +
Chr1	stalkie_big_nohaplotig	CDS	151702337	151702493	.	-	2	Parent=comp160137_c0_seq1.mrna1;Target=comp160137_c0_seq1 3833 3989 +
Chr1	stalkie_big_nohaplotig	CDS	151702602	151702964	.	-	2	Parent=comp160137_c0_seq1.mrna1;Target=comp160137_c0_seq1 3470 3832 +
Chr1	stalkie_big_nohaplotig	CDS	151703052	151703401	.	-	1	Parent=comp160137_c0_seq1.mrna1;Target=comp160137_c0_seq1 3120 3469 +
Chr1	stalkie_big_nohaplotig	CDS	151703495	151704342	.	-	0	Parent=comp160137_c0_seq1.mrna1;Target=comp160137_c0_seq1 2272 3119 +
Chr1	stalkie_big_nohaplotig	CDS	151704401	151705648	.	-	0	Parent=comp160137_c0_seq1.mrna1;Target=comp160137_c0_seq1 1024 2271 +
Chr1	stalkie_big_nohaplotig	CDS	151705711	151705854	.	-	0	Parent=comp160137_c0_seq1.mrna1;Target=comp160137_c0_seq1 880 1023 +
Chr1	stalkie_big_nohaplotig	CDS	151706501	151707379	.	-	0	Parent=comp160137_c0_seq1.mrna1;Target=comp160137_c0_seq1 1 879 +
Chr1	stalkie_big_nohaplotig	mRNA	151701060	151707535	.	-	.	ID=FBgn0031170.1.mrna1;geneID=FBgn0031170.1.path1;Name=FBgn0031170.1;Dir=sensecoverage=100.0;identity=99.8;matches=5167;mismatches=11;indels=0;unknowns=0;locus=RLOC_00012533
Chr1	stalkie_big_nohaplotig	exon	151701060	151701219	99	-	.	Parent=FBgn0031170.1.mrna1;Target=FBgn0031170.1 5019 5178 +
Chr1	stalkie_big_nohaplotig	exon	151701295	151702020	100	-	.	Parent=FBgn0031170.1.mrna1;Target=FBgn0031170.1 4293 5018 +
Chr1	stalkie_big_nohaplotig	exon	151702083	151702280	100	-	.	Parent=FBgn0031170.1.mrna1;Target=FBgn0031170.1 4095 4292 +
Chr1	stalkie_big_nohaplotig	exon	151702337	151702493	100	-	.	Parent=FBgn0031170.1.mrna1;Target=FBgn0031170.1 3938 4094 +
Chr1	stalkie_big_nohaplotig	exon	151702602	151702964	99	-	.	Parent=FBgn0031170.1.mrna1;Target=FBgn0031170.1 3575 3937 +
Chr1	stalkie_big_nohaplotig	exon	151703052	151703401	99	-	.	Parent=FBgn0031170.1.mrna1;Target=FBgn0031170.1 3225 3574 +
Chr1	stalkie_big_nohaplotig	exon	151703495	151704342	99	-	.	Parent=FBgn0031170.1.mrna1;Target=FBgn0031170.1 2377 3224 +
Chr1	stalkie_big_nohaplotig	exon	151704401	151705648	99	-	.	Parent=FBgn0031170.1.mrna1;Target=FBgn0031170.1 1129 2376 +
Chr1	stalkie_big_nohaplotig	exon	151705711	151705854	100	-	.	Parent=FBgn0031170.1.mrna1;Target=FBgn0031170.1 985 1128 +
Chr1	stalkie_big_nohaplotig	exon	151706501	151707110	99	-	.	Parent=FBgn0031170.1.mrna1;Target=FBgn0031170.1 375 984 +
Chr1	stalkie_big_nohaplotig	exon	151707162	151707535	99	-	.	Parent=FBgn0031170.1.mrna1;Target=FBgn0031170.1 1 374 +
Chr1	stalkie_big_nohaplotig	CDS	151701060	151701219	.	-	1	Parent=FBgn0031170.1.mrna1;Target=FBgn0031170.1 5019 5178 +
Chr1	stalkie_big_nohaplotig	CDS	151701295	151702020	.	-	1	Parent=FBgn0031170.1.mrna1;Target=FBgn0031170.1 4293 5018 +
Chr1	stalkie_big_nohaplotig	CDS	151702083	151702280	.	-	1	Parent=FBgn0031170.1.mrna1;Target=FBgn0031170.1 4095 4292 +
Chr1	stalkie_big_nohaplotig	CDS	151702337	151702493	.	-	2	Parent=FBgn0031170.1.mrna1;Target=FBgn0031170.1 3938 4094 +
Chr1	stalkie_big_nohaplotig	CDS	151702602	151702964	.	-	2	Parent=FBgn0031170.1.mrna1;Target=FBgn0031170.1 3575 3937 +
Chr1	stalkie_big_nohaplotig	CDS	151703052	151703401	.	-	1	Parent=FBgn0031170.1.mrna1;Target=FBgn0031170.1 3225 3574 +
Chr1	stalkie_big_nohaplotig	CDS	151703495	151704342	.	-	0	Parent=FBgn0031170.1.mrna1;Target=FBgn0031170.1 2377 3224 +
Chr1	stalkie_big_nohaplotig	CDS	151704401	151705648	.	-	0	Parent=FBgn0031170.1.mrna1;Target=FBgn0031170.1 1129 2376 +
Chr1	stalkie_big_nohaplotig	CDS	151705711	151705854	.	-	0	Parent=FBgn0031170.1.mrna1;Target=FBgn0031170.1 985 1128 +
Chr1	stalkie_big_nohaplotig	CDS	151706501	151707110	.	-	1	Parent=FBgn0031170.1.mrna1;Target=FBgn0031170.1 375 984 +
Chr1	stalkie_big_nohaplotig	CDS	151707162	151707535	.	-	0	Parent=FBgn0031170.1.mrna1;Target=FBgn0031170.1 1 374 +
Chr1	gffcl	locus	151708790	151718493	.	-	.	ID=RLOC_00012534;geneIDs=FBgn0031170.7.path1;transcripts=FBgn0031170.7.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151708790	151718493	.	-	.	ID=FBgn0031170.7.mrna1;geneID=FBgn0031170.7.path1;Name=FBgn0031170.7;Dir=sensecoverage=100.0;identity=99.5;matches=5011;mismatches=26;indels=0;unknowns=0;locus=RLOC_00012534
Chr1	stalkie_big_nohaplotig	exon	151708790	151708937	98	-	.	Parent=FBgn0031170.7.mrna1;Target=FBgn0031170.7 4890 5037 +
Chr1	stalkie_big_nohaplotig	exon	151709000	151709734	99	-	.	Parent=FBgn0031170.7.mrna1;Target=FBgn0031170.7 4155 4889 +
Chr1	stalkie_big_nohaplotig	exon	151711508	151711711	99	-	.	Parent=FBgn0031170.7.mrna1;Target=FBgn0031170.7 3951 4154 +
Chr1	stalkie_big_nohaplotig	exon	151711782	151711926	99	-	.	Parent=FBgn0031170.7.mrna1;Target=FBgn0031170.7 3806 3950 +
Chr1	stalkie_big_nohaplotig	exon	151711995	151712348	99	-	.	Parent=FBgn0031170.7.mrna1;Target=FBgn0031170.7 3452 3805 +
Chr1	stalkie_big_nohaplotig	exon	151712435	151712784	99	-	.	Parent=FBgn0031170.7.mrna1;Target=FBgn0031170.7 3102 3451 +
Chr1	stalkie_big_nohaplotig	exon	151713828	151714651	99	-	.	Parent=FBgn0031170.7.mrna1;Target=FBgn0031170.7 2278 3101 +
Chr1	stalkie_big_nohaplotig	exon	151716037	151717293	99	-	.	Parent=FBgn0031170.7.mrna1;Target=FBgn0031170.7 1021 2277 +
Chr1	stalkie_big_nohaplotig	exon	151717352	151717492	100	-	.	Parent=FBgn0031170.7.mrna1;Target=FBgn0031170.7 880 1020 +
Chr1	stalkie_big_nohaplotig	exon	151717563	151718151	99	-	.	Parent=FBgn0031170.7.mrna1;Target=FBgn0031170.7 291 879 +
Chr1	stalkie_big_nohaplotig	exon	151718204	151718493	98	-	.	Parent=FBgn0031170.7.mrna1;Target=FBgn0031170.7 1 290 +
Chr1	stalkie_big_nohaplotig	CDS	151708790	151708937	.	-	1	Parent=FBgn0031170.7.mrna1;Target=FBgn0031170.7 4890 5037 +
Chr1	stalkie_big_nohaplotig	CDS	151709000	151709734	.	-	1	Parent=FBgn0031170.7.mrna1;Target=FBgn0031170.7 4155 4889 +
Chr1	stalkie_big_nohaplotig	CDS	151711508	151711711	.	-	1	Parent=FBgn0031170.7.mrna1;Target=FBgn0031170.7 3951 4154 +
Chr1	stalkie_big_nohaplotig	CDS	151711782	151711926	.	-	2	Parent=FBgn0031170.7.mrna1;Target=FBgn0031170.7 3806 3950 +
Chr1	stalkie_big_nohaplotig	CDS	151711995	151712348	.	-	2	Parent=FBgn0031170.7.mrna1;Target=FBgn0031170.7 3452 3805 +
Chr1	stalkie_big_nohaplotig	CDS	151712435	151712784	.	-	1	Parent=FBgn0031170.7.mrna1;Target=FBgn0031170.7 3102 3451 +
Chr1	stalkie_big_nohaplotig	CDS	151713828	151714651	.	-	0	Parent=FBgn0031170.7.mrna1;Target=FBgn0031170.7 2278 3101 +
Chr1	stalkie_big_nohaplotig	CDS	151716037	151717293	.	-	0	Parent=FBgn0031170.7.mrna1;Target=FBgn0031170.7 1021 2277 +
Chr1	stalkie_big_nohaplotig	CDS	151717352	151717492	.	-	0	Parent=FBgn0031170.7.mrna1;Target=FBgn0031170.7 880 1020 +
Chr1	stalkie_big_nohaplotig	CDS	151717563	151718151	.	-	1	Parent=FBgn0031170.7.mrna1;Target=FBgn0031170.7 291 879 +
Chr1	stalkie_big_nohaplotig	CDS	151718204	151718493	.	-	0	Parent=FBgn0031170.7.mrna1;Target=FBgn0031170.7 1 290 +
Chr1	gffcl	locus	151766772	151767551	.	+	.	ID=RLOC_00012535;geneIDs=comp141646_c0_seq1.path1;transcripts=comp141646_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151766772	151767551	.	+	.	ID=comp141646_c0_seq1.mrna1;geneID=comp141646_c0_seq1.path1;Name=comp141646_c0_seq1;Dir=sensecoverage=95.9;identity=92.1;matches=668;mismatches=18;indels=39;unknowns=0;Target=comp141646_c0_seq1 482 511 +;locus=RLOC_00012535
Chr1	stalkie_big_nohaplotig	exon	151766772	151767185	97	+	.	Parent=comp141646_c0_seq1.mrna1;Target=comp141646_c0_seq1 1 411 +
Chr1	stalkie_big_nohaplotig	exon	151767255	151767551	85	+	.	Parent=comp141646_c0_seq1.mrna1;Target=comp141646_c0_seq1 412 700 +
Chr1	stalkie_big_nohaplotig	CDS	151767325	151767354	.	+	0	Parent=comp141646_c0_seq1.mrna1
Chr1	gffcl	locus	151788670	152016987	.	-	.	ID=RLOC_00012536;geneIDs=Dv_FBgn0206456.2.path1,comp159949_c0_seq1.path1;transcripts=comp159949_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151788670	152016987	.	-	.	ID=comp159949_c0_seq1.mrna1;geneID=comp159949_c0_seq1.path1;Name=comp159949_c0_seq1;Dir=antisensecoverage=99.9;identity=96.7;matches=1647;mismatches=41;indels=15;unknowns=0;locus=RLOC_00012536
Chr1	stalkie_big_nohaplotig	exon	151788670	151788969	95	-	.	Parent=comp159949_c0_seq1.mrna1;Target=comp159949_c0_seq1 1 296 -
Chr1	stalkie_big_nohaplotig	exon	151789034	151789588	98	-	.	Parent=comp159949_c0_seq1.mrna1;Target=comp159949_c0_seq1 297 851 -
Chr1	stalkie_big_nohaplotig	exon	151789655	151789840	98	-	.	Parent=comp159949_c0_seq1.mrna1;Target=comp159949_c0_seq1 852 1037 -
Chr1	stalkie_big_nohaplotig	exon	151790014	151790041	96	-	.	Parent=comp159949_c0_seq1.mrna1;Target=comp159949_c0_seq1 1038 1065 -
Chr1	stalkie_big_nohaplotig	exon	151790187	151790215	100	-	.	Parent=comp159949_c0_seq1.mrna1;Target=comp159949_c0_seq1 1066 1094 -
Chr1	stalkie_big_nohaplotig	exon	151790627	151790700	98	-	.	Parent=comp159949_c0_seq1.mrna1;Target=comp159949_c0_seq1 1095 1168 -
Chr1	stalkie_big_nohaplotig	exon	151790970	151791119	98	-	.	Parent=comp159949_c0_seq1.mrna1;Target=comp159949_c0_seq1 1169 1318 -
Chr1	stalkie_big_nohaplotig	exon	151792091	151792151	90	-	.	Parent=comp159949_c0_seq1.mrna1;Target=comp159949_c0_seq1 1319 1378 -
Chr1	stalkie_big_nohaplotig	exon	151794078	151794130	98	-	.	Parent=comp159949_c0_seq1.mrna1;Target=comp159949_c0_seq1 1379 1431 -
Chr1	stalkie_big_nohaplotig	exon	151940047	151940091	100	-	.	Parent=comp159949_c0_seq1.mrna1;Target=comp159949_c0_seq1 1432 1476 -
Chr1	stalkie_big_nohaplotig	exon	152016766	152016987	92	-	.	Parent=comp159949_c0_seq1.mrna1;Target=comp159949_c0_seq1 1477 1688 -
Chr1	stalkie_big_nohaplotig	CDS	151789271	151789588	.	-	0	Parent=comp159949_c0_seq1.mrna1;Target=comp159949_c0_seq1 534 851 .
Chr1	stalkie_big_nohaplotig	CDS	151789655	151789840	.	-	0	Parent=comp159949_c0_seq1.mrna1;Target=comp159949_c0_seq1 852 1037 .
Chr1	stalkie_big_nohaplotig	CDS	151790014	151790041	.	-	1	Parent=comp159949_c0_seq1.mrna1;Target=comp159949_c0_seq1 1038 1065 .
Chr1	stalkie_big_nohaplotig	CDS	151790187	151790200	.	-	0	Parent=comp159949_c0_seq1.mrna1;Target=comp159949_c0_seq1 1066 1079 .
Chr1	gffcl	locus	151813034	151813752	.	-	.	ID=RLOC_00012537;geneIDs=comp151793_c0_seq1.path1;transcripts=comp151793_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151813034	151813752	.	-	.	ID=comp151793_c0_seq1.mrna1;geneID=comp151793_c0_seq1.path1;Name=comp151793_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=447;mismatches=2;indels=0;unknowns=0;Target=comp151793_c0_seq1 324 43 .;locus=RLOC_00012537
Chr1	stalkie_big_nohaplotig	exon	151813034	151813072	94	-	.	Parent=comp151793_c0_seq1.mrna1;Target=comp151793_c0_seq1 449 411 .
Chr1	stalkie_big_nohaplotig	exon	151813343	151813752	100	-	.	Parent=comp151793_c0_seq1.mrna1;Target=comp151793_c0_seq1 410 1 .
Chr1	stalkie_big_nohaplotig	CDS	151813429	151813710	.	-	0	Parent=comp151793_c0_seq1.mrna1
Chr1	gffcl	locus	151897621	151897917	.	+	.	ID=RLOC_00012538;geneIDs=comp150566_c0_seq1.path1;transcripts=comp150566_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151897621	151897917	.	+	.	ID=comp150566_c0_seq1.mrna1;geneID=comp150566_c0_seq1.path1;Name=comp150566_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=289;mismatches=7;indels=1;unknowns=0;Target=comp150566_c0_seq1 296 1 .;CDS_Target=comp150566_c0_seq1 53 3 .;locus=RLOC_00012538
Chr1	stalkie_big_nohaplotig	exon	151897621	151897917	97	+	.	Parent=comp150566_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151897623	151897673	.	+	0	Parent=comp150566_c0_seq1.mrna1
Chr1	gffcl	locus	151908766	151923055	.	+	.	ID=RLOC_00012539;geneIDs=FBgn0032109.1.path1,comp159690_c1_seq1.path1;transcripts=FBgn0032109.1.mrna1,comp159690_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151908766	151910636	.	+	.	ID=FBgn0032109.1.mrna1;geneID=FBgn0032109.1.path1;Name=FBgn0032109.1;Dir=sensecoverage=100.0;identity=99.2;matches=1582;mismatches=12;indels=0;unknowns=2;locus=RLOC_00012539
Chr1	stalkie_big_nohaplotig	exon	151908766	151908887	100	+	.	Parent=FBgn0032109.1.mrna1;Target=FBgn0032109.1 1 122 +
Chr1	stalkie_big_nohaplotig	exon	151908959	151909300	97	+	.	Parent=FBgn0032109.1.mrna1;Target=FBgn0032109.1 123 464 +
Chr1	stalkie_big_nohaplotig	exon	151909368	151909650	98	+	.	Parent=FBgn0032109.1.mrna1;Target=FBgn0032109.1 465 747 +
Chr1	stalkie_big_nohaplotig	exon	151909717	151910468	99	+	.	Parent=FBgn0032109.1.mrna1;Target=FBgn0032109.1 748 1499 +
Chr1	stalkie_big_nohaplotig	exon	151910540	151910636	100	+	.	Parent=FBgn0032109.1.mrna1;Target=FBgn0032109.1 1500 1596 +
Chr1	stalkie_big_nohaplotig	CDS	151908766	151908887	.	+	0	Parent=FBgn0032109.1.mrna1;Target=FBgn0032109.1 1 122 +
Chr1	stalkie_big_nohaplotig	CDS	151908959	151909300	.	+	1	Parent=FBgn0032109.1.mrna1;Target=FBgn0032109.1 123 464 +
Chr1	stalkie_big_nohaplotig	CDS	151909368	151909650	.	+	1	Parent=FBgn0032109.1.mrna1;Target=FBgn0032109.1 465 747 +
Chr1	stalkie_big_nohaplotig	CDS	151909717	151910468	.	+	0	Parent=FBgn0032109.1.mrna1;Target=FBgn0032109.1 748 1499 +
Chr1	stalkie_big_nohaplotig	CDS	151910540	151910636	.	+	1	Parent=FBgn0032109.1.mrna1;Target=FBgn0032109.1 1500 1596 +
Chr1	stalkie_big_nohaplotig	mRNA	151909745	151923055	.	+	.	ID=comp159690_c1_seq1.mrna1;geneID=comp159690_c1_seq1.path1;Name=comp159690_c1_seq1;Dir=sensecoverage=99.4;identity=95.2;matches=982;mismatches=2;indels=48;unknowns=0;locus=RLOC_00012539
Chr1	stalkie_big_nohaplotig	exon	151909745	151910468	100	+	.	Parent=comp159690_c1_seq1.mrna1;Target=comp159690_c1_seq1 1 724 +
Chr1	stalkie_big_nohaplotig	exon	151922796	151923055	83	+	.	Parent=comp159690_c1_seq1.mrna1;Target=comp159690_c1_seq1 725 1032 +
Chr1	stalkie_big_nohaplotig	CDS	151909747	151910468	.	+	0	Parent=comp159690_c1_seq1.mrna1;Target=comp159690_c1_seq1 3 724 +
Chr1	stalkie_big_nohaplotig	CDS	151922796	151922895	.	+	1	Parent=comp159690_c1_seq1.mrna1;Target=comp159690_c1_seq1 725 824 +
Chr1	gffcl	locus	151952987	151965678	.	+	.	ID=RLOC_00012540;geneIDs=FBgn0052521.1.path1,comp51550_c0_seq1.path1,comp139816_c1_seq1.path1;transcripts=FBgn0052521.1.mrna1,comp139816_c1_seq1.mrna1,comp51550_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151952987	151965678	.	+	.	ID=FBgn0052521.1.mrna1;geneID=FBgn0052521.1.path1;Name=FBgn0052521.1;Dir=sensecoverage=100.0;identity=98.3;matches=1221;mismatches=12;indels=9;unknowns=0;locus=RLOC_00012540
Chr1	stalkie_big_nohaplotig	exon	151952987	151953077	100	+	.	Parent=FBgn0052521.1.mrna1;Target=FBgn0052521.1 1 91 +
Chr1	stalkie_big_nohaplotig	exon	151953680	151953844	98	+	.	Parent=FBgn0052521.1.mrna1;Target=FBgn0052521.1 92 256 +
Chr1	stalkie_big_nohaplotig	exon	151964699	151965678	98	+	.	Parent=FBgn0052521.1.mrna1;Target=FBgn0052521.1 257 1239 +
Chr1	stalkie_big_nohaplotig	CDS	151952987	151953077	.	+	0	Parent=FBgn0052521.1.mrna1;Target=FBgn0052521.1 1 91 +
Chr1	stalkie_big_nohaplotig	CDS	151953680	151953844	.	+	2	Parent=FBgn0052521.1.mrna1;Target=FBgn0052521.1 92 256 +
Chr1	stalkie_big_nohaplotig	CDS	151964699	151965678	.	+	2	Parent=FBgn0052521.1.mrna1;Target=FBgn0052521.1 257 1239 +
Chr1	stalkie_big_nohaplotig	mRNA	151953823	151954198	.	+	.	ID=comp139816_c1_seq1.mrna1;geneID=comp139816_c1_seq1.path1;Name=comp139816_c1_seq1;Dir=indeterminatecoverage=100.0;identity=91.3;matches=357;mismatches=19;indels=15;unknowns=0;Target=comp139816_c1_seq1 391 1 .;CDS_Target=comp139816_c1_seq1 296 252 .;locus=RLOC_00012540
Chr1	stalkie_big_nohaplotig	exon	151953823	151954198	91	+	.	Parent=comp139816_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151954059	151954103	.	+	0	Parent=comp139816_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151964404	151964719	.	+	.	ID=comp51550_c0_seq1.mrna1;geneID=comp51550_c0_seq1.path1;Name=comp51550_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=316;mismatches=0;indels=0;unknowns=0;Target=comp51550_c0_seq1 316 1 .;CDS_Target=comp51550_c0_seq1 222 100 .;locus=RLOC_00012540
Chr1	stalkie_big_nohaplotig	exon	151964404	151964719	100	+	.	Parent=comp51550_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151964503	151964625	.	+	0	Parent=comp51550_c0_seq1.mrna1
Chr1	gffcl	locus	151959184	151960626	.	+	.	ID=RLOC_00012542;geneIDs=ORF774.path1;transcripts=ORF774.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151959184	151960626	.	+	.	ID=ORF774.mrna1;geneID=ORF774.path1;Name=ORF774;Dir=indeterminatecoverage=96.9;identity=98.4;matches=1384;mismatches=11;indels=12;unknowns=0;locus=RLOC_00012542
Chr1	stalkie_big_nohaplotig	exon	151959184	151959760	97	+	.	Parent=ORF774.mrna1;Target=ORF774 571 1 .
Chr1	stalkie_big_nohaplotig	exon	151959800	151960626	99	+	.	Parent=ORF774.mrna1;Target=ORF774 1398 572 .
Chr1	stalkie_big_nohaplotig	CDS	151959184	151959760	.	+	0	Parent=ORF774.mrna1;Target=ORF774 571 1 .
Chr1	stalkie_big_nohaplotig	CDS	151959800	151960626	.	+	2	Parent=ORF774.mrna1;Target=ORF774 1398 572 .
Chr1	gffcl	locus	151961929	151963296	.	-	.	ID=RLOC_00012543;geneIDs=comp162813_c0_seq1.path1;transcripts=comp162813_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151961929	151963296	.	-	.	ID=comp162813_c0_seq1.mrna1;geneID=comp162813_c0_seq1.path1;Name=comp162813_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.6;matches=1309;mismatches=55;indels=49;unknowns=0;Target=comp162813_c0_seq1 1409 1 .;CDS_Target=comp162813_c0_seq1 101 3 .;locus=RLOC_00012543
Chr1	stalkie_big_nohaplotig	exon	151961929	151963296	92	-	.	Parent=comp162813_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151963196	151963294	.	-	0	Parent=comp162813_c0_seq1.mrna1
Chr1	gffcl	locus	151963420	151963876	.	+	.	ID=RLOC_00012544;geneIDs=comp117898_c0_seq1.path1;transcripts=comp117898_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	151963420	151963876	.	+	.	ID=comp117898_c0_seq1.mrna1;geneID=comp117898_c0_seq1.path1;Name=comp117898_c0_seq1;Dir=indeterminatecoverage=96.6;identity=95.2;matches=441;mismatches=10;indels=12;unknowns=0;Target=comp117898_c0_seq1 473 17 .;CDS_Target=comp117898_c0_seq1 80 18 .;locus=RLOC_00012544
Chr1	stalkie_big_nohaplotig	exon	151963420	151963876	95	+	.	Parent=comp117898_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	151963421	151963483	.	+	0	Parent=comp117898_c0_seq1.mrna1
Chr1	gffcl	locus	152039354	152045813	.	-	.	ID=RLOC_00012545;geneIDs=FBgn0003950.1.path1;transcripts=FBgn0003950.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152039354	152045813	.	-	.	ID=FBgn0003950.1.mrna1;geneID=FBgn0003950.1.path1;Name=FBgn0003950.1;Dir=sensecoverage=100.0;identity=99.1;matches=4189;mismatches=32;indels=6;unknowns=0;locus=RLOC_00012545
Chr1	stalkie_big_nohaplotig	exon	152039354	152041505	99	-	.	Parent=FBgn0003950.1.mrna1;Target=FBgn0003950.1 2076 4221 +
Chr1	stalkie_big_nohaplotig	exon	152042038	152042315	97	-	.	Parent=FBgn0003950.1.mrna1;Target=FBgn0003950.1 1798 2075 +
Chr1	stalkie_big_nohaplotig	exon	152042987	152043187	99	-	.	Parent=FBgn0003950.1.mrna1;Target=FBgn0003950.1 1597 1797 +
Chr1	stalkie_big_nohaplotig	exon	152043247	152043369	100	-	.	Parent=FBgn0003950.1.mrna1;Target=FBgn0003950.1 1474 1596 +
Chr1	stalkie_big_nohaplotig	exon	152043421	152043717	100	-	.	Parent=FBgn0003950.1.mrna1;Target=FBgn0003950.1 1177 1473 +
Chr1	stalkie_big_nohaplotig	exon	152043790	152044748	98	-	.	Parent=FBgn0003950.1.mrna1;Target=FBgn0003950.1 218 1176 +
Chr1	stalkie_big_nohaplotig	exon	152045597	152045813	99	-	.	Parent=FBgn0003950.1.mrna1;Target=FBgn0003950.1 1 217 +
Chr1	stalkie_big_nohaplotig	CDS	152039354	152041505	.	-	1	Parent=FBgn0003950.1.mrna1;Target=FBgn0003950.1 2076 4221 +
Chr1	stalkie_big_nohaplotig	CDS	152042038	152042315	.	-	0	Parent=FBgn0003950.1.mrna1;Target=FBgn0003950.1 1798 2075 +
Chr1	stalkie_big_nohaplotig	CDS	152042987	152043187	.	-	0	Parent=FBgn0003950.1.mrna1;Target=FBgn0003950.1 1597 1797 +
Chr1	stalkie_big_nohaplotig	CDS	152043247	152043369	.	-	0	Parent=FBgn0003950.1.mrna1;Target=FBgn0003950.1 1474 1596 +
Chr1	stalkie_big_nohaplotig	CDS	152043421	152043717	.	-	0	Parent=FBgn0003950.1.mrna1;Target=FBgn0003950.1 1177 1473 +
Chr1	stalkie_big_nohaplotig	CDS	152043790	152044748	.	-	2	Parent=FBgn0003950.1.mrna1;Target=FBgn0003950.1 218 1176 +
Chr1	stalkie_big_nohaplotig	CDS	152045597	152045813	.	-	0	Parent=FBgn0003950.1.mrna1;Target=FBgn0003950.1 1 217 +
Chr1	gffcl	locus	152046209	152048529	.	+	.	ID=RLOC_00012546;geneIDs=FBgn0039343.1.path1;transcripts=FBgn0039343.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152046209	152048529	.	+	.	ID=FBgn0039343.1.mrna1;geneID=FBgn0039343.1.path1;Name=FBgn0039343.1;Dir=sensecoverage=100.0;identity=99.8;matches=1889;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012546
Chr1	stalkie_big_nohaplotig	exon	152046209	152046409	99	+	.	Parent=FBgn0039343.1.mrna1;Target=FBgn0039343.1 1 201 +
Chr1	stalkie_big_nohaplotig	exon	152046475	152046598	100	+	.	Parent=FBgn0039343.1.mrna1;Target=FBgn0039343.1 202 325 +
Chr1	stalkie_big_nohaplotig	exon	152046655	152046855	99	+	.	Parent=FBgn0039343.1.mrna1;Target=FBgn0039343.1 326 526 +
Chr1	stalkie_big_nohaplotig	exon	152046921	152047066	100	+	.	Parent=FBgn0039343.1.mrna1;Target=FBgn0039343.1 527 672 +
Chr1	stalkie_big_nohaplotig	exon	152047133	152047375	100	+	.	Parent=FBgn0039343.1.mrna1;Target=FBgn0039343.1 673 915 +
Chr1	stalkie_big_nohaplotig	exon	152047435	152047977	100	+	.	Parent=FBgn0039343.1.mrna1;Target=FBgn0039343.1 916 1458 +
Chr1	stalkie_big_nohaplotig	exon	152048038	152048121	97	+	.	Parent=FBgn0039343.1.mrna1;Target=FBgn0039343.1 1459 1542 +
Chr1	stalkie_big_nohaplotig	exon	152048179	152048529	100	+	.	Parent=FBgn0039343.1.mrna1;Target=FBgn0039343.1 1543 1893 +
Chr1	stalkie_big_nohaplotig	CDS	152046209	152046409	.	+	0	Parent=FBgn0039343.1.mrna1;Target=FBgn0039343.1 1 201 +
Chr1	stalkie_big_nohaplotig	CDS	152046475	152046598	.	+	0	Parent=FBgn0039343.1.mrna1;Target=FBgn0039343.1 202 325 +
Chr1	stalkie_big_nohaplotig	CDS	152046655	152046855	.	+	2	Parent=FBgn0039343.1.mrna1;Target=FBgn0039343.1 326 526 +
Chr1	stalkie_big_nohaplotig	CDS	152046921	152047066	.	+	2	Parent=FBgn0039343.1.mrna1;Target=FBgn0039343.1 527 672 +
Chr1	stalkie_big_nohaplotig	CDS	152047133	152047375	.	+	0	Parent=FBgn0039343.1.mrna1;Target=FBgn0039343.1 673 915 +
Chr1	stalkie_big_nohaplotig	CDS	152047435	152047977	.	+	0	Parent=FBgn0039343.1.mrna1;Target=FBgn0039343.1 916 1458 +
Chr1	stalkie_big_nohaplotig	CDS	152048038	152048121	.	+	0	Parent=FBgn0039343.1.mrna1;Target=FBgn0039343.1 1459 1542 +
Chr1	stalkie_big_nohaplotig	CDS	152048179	152048529	.	+	0	Parent=FBgn0039343.1.mrna1;Target=FBgn0039343.1 1543 1893 +
Chr1	gffcl	locus	152050797	152051250	.	+	.	ID=RLOC_00012547;geneIDs=comp120519_c0_seq1.path1;transcripts=comp120519_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152050797	152051250	.	+	.	ID=comp120519_c0_seq1.mrna1;geneID=comp120519_c0_seq1.path1;Name=comp120519_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=454;mismatches=0;indels=0;unknowns=0;Target=comp120519_c0_seq1 454 1 .;CDS_Target=comp120519_c0_seq1 454 224 .;locus=RLOC_00012547
Chr1	stalkie_big_nohaplotig	exon	152050797	152051250	100	+	.	Parent=comp120519_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152051020	152051250	.	+	0	Parent=comp120519_c0_seq1.mrna1
Chr1	gffcl	locus	152063288	152063326	.	+	.	ID=RLOC_00012548;geneIDs=comp162267_c0_seq1.path2;transcripts=comp162267_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	152063288	152063326	.	+	.	ID=comp162267_c0_seq1.mrna2;geneID=comp162267_c0_seq1.path2;Name=comp162267_c0_seq1;Dir=indeterminatecoverage=4.9;identity=100.0;matches=39;mismatches=0;indels=0;unknowns=0;Target=comp162267_c0_seq1 795 757 .;CDS_Target=comp162267_c0_seq1 780 757 .;locus=RLOC_00012548
Chr1	stalkie_big_nohaplotig	exon	152063288	152063326	100	+	.	Parent=comp162267_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	152063288	152063311	.	+	0	Parent=comp162267_c0_seq1.mrna2
Chr1	gffcl	locus	152109139	152120461	.	-	.	ID=RLOC_00012549;geneIDs=FBgn0028491.1.path1;transcripts=FBgn0028491.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152109139	152120461	.	-	.	ID=FBgn0028491.1.mrna1;geneID=FBgn0028491.1.path1;Name=FBgn0028491.1;Dir=sensecoverage=100.0;identity=99.9;matches=2370;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012549
Chr1	stalkie_big_nohaplotig	exon	152109139	152109920	99	-	.	Parent=FBgn0028491.1.mrna1;Target=FBgn0028491.1 1592 2373 +
Chr1	stalkie_big_nohaplotig	exon	152109983	152110181	100	-	.	Parent=FBgn0028491.1.mrna1;Target=FBgn0028491.1 1393 1591 +
Chr1	stalkie_big_nohaplotig	exon	152111021	152111437	100	-	.	Parent=FBgn0028491.1.mrna1;Target=FBgn0028491.1 976 1392 +
Chr1	stalkie_big_nohaplotig	exon	152111510	152111592	100	-	.	Parent=FBgn0028491.1.mrna1;Target=FBgn0028491.1 893 975 +
Chr1	stalkie_big_nohaplotig	exon	152111655	152112158	99	-	.	Parent=FBgn0028491.1.mrna1;Target=FBgn0028491.1 389 892 +
Chr1	stalkie_big_nohaplotig	exon	152112230	152112308	100	-	.	Parent=FBgn0028491.1.mrna1;Target=FBgn0028491.1 310 388 +
Chr1	stalkie_big_nohaplotig	exon	152112868	152113130	100	-	.	Parent=FBgn0028491.1.mrna1;Target=FBgn0028491.1 47 309 +
Chr1	stalkie_big_nohaplotig	exon	152120416	152120461	100	-	.	Parent=FBgn0028491.1.mrna1;Target=FBgn0028491.1 1 46 +
Chr1	stalkie_big_nohaplotig	CDS	152109139	152109920	.	-	2	Parent=FBgn0028491.1.mrna1;Target=FBgn0028491.1 1592 2373 +
Chr1	stalkie_big_nohaplotig	CDS	152109983	152110181	.	-	0	Parent=FBgn0028491.1.mrna1;Target=FBgn0028491.1 1393 1591 +
Chr1	stalkie_big_nohaplotig	CDS	152111021	152111437	.	-	0	Parent=FBgn0028491.1.mrna1;Target=FBgn0028491.1 976 1392 +
Chr1	stalkie_big_nohaplotig	CDS	152111510	152111592	.	-	2	Parent=FBgn0028491.1.mrna1;Target=FBgn0028491.1 893 975 +
Chr1	stalkie_big_nohaplotig	CDS	152111655	152112158	.	-	2	Parent=FBgn0028491.1.mrna1;Target=FBgn0028491.1 389 892 +
Chr1	stalkie_big_nohaplotig	CDS	152112230	152112308	.	-	0	Parent=FBgn0028491.1.mrna1;Target=FBgn0028491.1 310 388 +
Chr1	stalkie_big_nohaplotig	CDS	152112868	152113130	.	-	2	Parent=FBgn0028491.1.mrna1;Target=FBgn0028491.1 47 309 +
Chr1	stalkie_big_nohaplotig	CDS	152120416	152120461	.	-	0	Parent=FBgn0028491.1.mrna1;Target=FBgn0028491.1 1 46 +
Chr1	gffcl	locus	152136479	152150749	.	+	.	ID=RLOC_00012550;geneIDs=FBgn0015565.1.path1;transcripts=FBgn0015565.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152136479	152150749	.	+	.	ID=FBgn0015565.1.mrna1;geneID=FBgn0015565.1.path1;Name=FBgn0015565.1;Dir=sensecoverage=100.0;identity=99.2;matches=2098;mismatches=17;indels=0;unknowns=0;locus=RLOC_00012550
Chr1	stalkie_big_nohaplotig	exon	152136479	152136520	100	+	.	Parent=FBgn0015565.1.mrna1;Target=FBgn0015565.1 1 42 +
Chr1	stalkie_big_nohaplotig	exon	152148393	152148471	100	+	.	Parent=FBgn0015565.1.mrna1;Target=FBgn0015565.1 43 121 +
Chr1	stalkie_big_nohaplotig	exon	152148549	152148777	100	+	.	Parent=FBgn0015565.1.mrna1;Target=FBgn0015565.1 122 350 +
Chr1	stalkie_big_nohaplotig	exon	152148864	152150184	98	+	.	Parent=FBgn0015565.1.mrna1;Target=FBgn0015565.1 351 1671 +
Chr1	stalkie_big_nohaplotig	exon	152150247	152150483	99	+	.	Parent=FBgn0015565.1.mrna1;Target=FBgn0015565.1 1672 1908 +
Chr1	stalkie_big_nohaplotig	exon	152150543	152150749	99	+	.	Parent=FBgn0015565.1.mrna1;Target=FBgn0015565.1 1909 2115 +
Chr1	stalkie_big_nohaplotig	CDS	152136479	152136520	.	+	0	Parent=FBgn0015565.1.mrna1;Target=FBgn0015565.1 1 42 +
Chr1	stalkie_big_nohaplotig	CDS	152148393	152148471	.	+	0	Parent=FBgn0015565.1.mrna1;Target=FBgn0015565.1 43 121 +
Chr1	stalkie_big_nohaplotig	CDS	152148549	152148777	.	+	2	Parent=FBgn0015565.1.mrna1;Target=FBgn0015565.1 122 350 +
Chr1	stalkie_big_nohaplotig	CDS	152148864	152150184	.	+	1	Parent=FBgn0015565.1.mrna1;Target=FBgn0015565.1 351 1671 +
Chr1	stalkie_big_nohaplotig	CDS	152150247	152150483	.	+	0	Parent=FBgn0015565.1.mrna1;Target=FBgn0015565.1 1672 1908 +
Chr1	stalkie_big_nohaplotig	CDS	152150543	152150749	.	+	0	Parent=FBgn0015565.1.mrna1;Target=FBgn0015565.1 1909 2115 +
Chr1	gffcl	locus	152153968	152154185	.	+	.	ID=RLOC_00012551;geneIDs=comp61395_c0_seq1.path1;transcripts=comp61395_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152153968	152154185	.	+	.	ID=comp61395_c0_seq1.mrna1;geneID=comp61395_c0_seq1.path1;Name=comp61395_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=216;mismatches=2;indels=0;unknowns=0;Target=comp61395_c0_seq1 218 1 .;CDS_Target=comp61395_c0_seq1 128 3 .;locus=RLOC_00012551
Chr1	stalkie_big_nohaplotig	exon	152153968	152154185	99	+	.	Parent=comp61395_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152153970	152154095	.	+	0	Parent=comp61395_c0_seq1.mrna1
Chr1	gffcl	locus	152154188	152273525	.	-	.	ID=RLOC_00012552;geneIDs=FBgn0000542.1.path1,comp163702_c0_seq1.path1;transcripts=FBgn0000542.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152154188	152273525	.	-	.	ID=FBgn0000542.1.mrna1;geneID=FBgn0000542.1.path1;Name=FBgn0000542.1;Dir=sensecoverage=100.0;identity=99.2;matches=4385;mismatches=34;indels=0;unknowns=0;locus=RLOC_00012552
Chr1	stalkie_big_nohaplotig	exon	152154188	152157538	99	-	.	Parent=FBgn0000542.1.mrna1;Target=FBgn0000542.1 1069 4419 +
Chr1	stalkie_big_nohaplotig	exon	152157602	152157907	98	-	.	Parent=FBgn0000542.1.mrna1;Target=FBgn0000542.1 763 1068 +
Chr1	stalkie_big_nohaplotig	exon	152157986	152158114	99	-	.	Parent=FBgn0000542.1.mrna1;Target=FBgn0000542.1 634 762 +
Chr1	stalkie_big_nohaplotig	exon	152161139	152161432	100	-	.	Parent=FBgn0000542.1.mrna1;Target=FBgn0000542.1 340 633 +
Chr1	stalkie_big_nohaplotig	exon	152203935	152204027	96	-	.	Parent=FBgn0000542.1.mrna1;Target=FBgn0000542.1 247 339 +
Chr1	stalkie_big_nohaplotig	exon	152273280	152273525	100	-	.	Parent=FBgn0000542.1.mrna1;Target=FBgn0000542.1 1 246 +
Chr1	stalkie_big_nohaplotig	CDS	152154188	152157538	.	-	0	Parent=FBgn0000542.1.mrna1;Target=FBgn0000542.1 1069 4419 +
Chr1	stalkie_big_nohaplotig	CDS	152157602	152157907	.	-	0	Parent=FBgn0000542.1.mrna1;Target=FBgn0000542.1 763 1068 +
Chr1	stalkie_big_nohaplotig	CDS	152157986	152158114	.	-	0	Parent=FBgn0000542.1.mrna1;Target=FBgn0000542.1 634 762 +
Chr1	stalkie_big_nohaplotig	CDS	152161139	152161432	.	-	0	Parent=FBgn0000542.1.mrna1;Target=FBgn0000542.1 340 633 +
Chr1	stalkie_big_nohaplotig	CDS	152203935	152204027	.	-	0	Parent=FBgn0000542.1.mrna1;Target=FBgn0000542.1 247 339 +
Chr1	stalkie_big_nohaplotig	CDS	152273280	152273525	.	-	0	Parent=FBgn0000542.1.mrna1;Target=FBgn0000542.1 1 246 +
Chr1	gffcl	locus	152229880	152230439	.	+	.	ID=RLOC_00012553;geneIDs=comp152797_c0_seq1.path1;transcripts=comp152797_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152229880	152230439	.	+	.	ID=comp152797_c0_seq1.mrna1;geneID=comp152797_c0_seq1.path1;Name=comp152797_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.5;matches=554;mismatches=6;indels=14;unknowns=0;Target=comp152797_c0_seq1 574 1 .;CDS_Target=comp152797_c0_seq1 159 1 .;locus=RLOC_00012553
Chr1	stalkie_big_nohaplotig	exon	152229880	152230439	96	+	.	Parent=comp152797_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152229880	152230038	.	+	0	Parent=comp152797_c0_seq1.mrna1
Chr1	gffcl	locus	152313918	152314353	.	-	.	ID=RLOC_00012554;geneIDs=comp119209_c0_seq1.path1;transcripts=comp119209_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152313918	152314353	.	-	.	ID=comp119209_c0_seq1.mrna1;geneID=comp119209_c0_seq1.path1;Name=comp119209_c0_seq1;Dir=indeterminatecoverage=92.6;identity=99.5;matches=435;mismatches=1;indels=1;unknowns=0;Target=comp119209_c0_seq1 437 1 .;CDS_Target=comp119209_c0_seq1 278 132 .;locus=RLOC_00012554
Chr1	stalkie_big_nohaplotig	exon	152313918	152314353	99	-	.	Parent=comp119209_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152314077	152314222	.	-	0	Parent=comp119209_c0_seq1.mrna1
Chr1	gffcl	locus	152327071	152328737	.	-	.	ID=RLOC_00012555;geneIDs=FBgn0030310.2.path1;transcripts=FBgn0030310.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152327071	152328737	.	-	.	ID=FBgn0030310.2.mrna1;geneID=FBgn0030310.2.path1;Name=FBgn0030310.2;Dir=sensecoverage=100.0;identity=98.8;matches=569;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012555
Chr1	stalkie_big_nohaplotig	exon	152327071	152327252	97	-	.	Parent=FBgn0030310.2.mrna1;Target=FBgn0030310.2 395 576 +
Chr1	stalkie_big_nohaplotig	exon	152327338	152327456	100	-	.	Parent=FBgn0030310.2.mrna1;Target=FBgn0030310.2 276 394 +
Chr1	stalkie_big_nohaplotig	exon	152328463	152328737	98	-	.	Parent=FBgn0030310.2.mrna1;Target=FBgn0030310.2 1 275 +
Chr1	stalkie_big_nohaplotig	CDS	152327071	152327252	.	-	2	Parent=FBgn0030310.2.mrna1;Target=FBgn0030310.2 395 576 +
Chr1	stalkie_big_nohaplotig	CDS	152327338	152327456	.	-	1	Parent=FBgn0030310.2.mrna1;Target=FBgn0030310.2 276 394 +
Chr1	stalkie_big_nohaplotig	CDS	152328463	152328737	.	-	0	Parent=FBgn0030310.2.mrna1;Target=FBgn0030310.2 1 275 +
Chr1	gffcl	locus	152330305	152332260	.	-	.	ID=RLOC_00012556;geneIDs=FBgn0030310.1.path1;transcripts=FBgn0030310.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152330305	152332260	.	-	.	ID=FBgn0030310.1.mrna1;geneID=FBgn0030310.1.path1;Name=FBgn0030310.1;Dir=sensecoverage=100.0;identity=99.5;matches=573;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012556
Chr1	stalkie_big_nohaplotig	exon	152330305	152330486	98	-	.	Parent=FBgn0030310.1.mrna1;Target=FBgn0030310.1 395 576 +
Chr1	stalkie_big_nohaplotig	exon	152330557	152330675	100	-	.	Parent=FBgn0030310.1.mrna1;Target=FBgn0030310.1 276 394 +
Chr1	stalkie_big_nohaplotig	exon	152331986	152332260	99	-	.	Parent=FBgn0030310.1.mrna1;Target=FBgn0030310.1 1 275 +
Chr1	stalkie_big_nohaplotig	CDS	152330305	152330486	.	-	2	Parent=FBgn0030310.1.mrna1;Target=FBgn0030310.1 395 576 +
Chr1	stalkie_big_nohaplotig	CDS	152330557	152330675	.	-	1	Parent=FBgn0030310.1.mrna1;Target=FBgn0030310.1 276 394 +
Chr1	stalkie_big_nohaplotig	CDS	152331986	152332260	.	-	0	Parent=FBgn0030310.1.mrna1;Target=FBgn0030310.1 1 275 +
Chr1	gffcl	locus	152344648	152345131	.	-	.	ID=RLOC_00012557;geneIDs=FBgn0053998.1.path1;transcripts=FBgn0053998.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152344648	152345131	.	-	.	ID=FBgn0053998.1.mrna1;geneID=FBgn0053998.1.path1;Name=FBgn0053998.1;Dir=sensecoverage=99.8;identity=98.1;matches=417;mismatches=8;indels=0;unknowns=0;locus=RLOC_00012557
Chr1	stalkie_big_nohaplotig	exon	152344648	152344826	99	-	.	Parent=FBgn0053998.1.mrna1;Target=FBgn0053998.1 247 425 +
Chr1	stalkie_big_nohaplotig	exon	152344886	152345131	97	-	.	Parent=FBgn0053998.1.mrna1;Target=FBgn0053998.1 1 246 +
Chr1	stalkie_big_nohaplotig	CDS	152344650	152344826	.	-	0	Parent=FBgn0053998.1.mrna1;Target=FBgn0053998.1 247 423 +
Chr1	stalkie_big_nohaplotig	CDS	152344886	152345131	.	-	0	Parent=FBgn0053998.1.mrna1;Target=FBgn0053998.1 1 246 +
Chr1	gffcl	locus	152359399	152365416	.	-	.	ID=RLOC_00012558;geneIDs=FBgn0003277.2.path1,comp163105_c2_seq1.path1;transcripts=FBgn0003277.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152359442	152365416	.	-	.	ID=FBgn0003277.2.mrna1;geneID=FBgn0003277.2.path1;Name=FBgn0003277.2;Dir=sensecoverage=100.0;identity=99.5;matches=5512;mismatches=27;indels=0;unknowns=2;locus=RLOC_00012558
Chr1	stalkie_big_nohaplotig	exon	152359442	152360517	99	-	.	Parent=FBgn0003277.2.mrna1;Target=FBgn0003277.2 4466 5541 +
Chr1	stalkie_big_nohaplotig	exon	152360588	152360776	99	-	.	Parent=FBgn0003277.2.mrna1;Target=FBgn0003277.2 4277 4465 +
Chr1	stalkie_big_nohaplotig	exon	152360841	152361942	99	-	.	Parent=FBgn0003277.2.mrna1;Target=FBgn0003277.2 3175 4276 +
Chr1	stalkie_big_nohaplotig	exon	152362001	152362375	100	-	.	Parent=FBgn0003277.2.mrna1;Target=FBgn0003277.2 2800 3174 +
Chr1	stalkie_big_nohaplotig	exon	152362435	152363174	98	-	.	Parent=FBgn0003277.2.mrna1;Target=FBgn0003277.2 2060 2799 +
Chr1	stalkie_big_nohaplotig	exon	152363240	152363840	99	-	.	Parent=FBgn0003277.2.mrna1;Target=FBgn0003277.2 1459 2059 +
Chr1	stalkie_big_nohaplotig	exon	152363898	152364854	99	-	.	Parent=FBgn0003277.2.mrna1;Target=FBgn0003277.2 502 1458 +
Chr1	stalkie_big_nohaplotig	exon	152364916	152365416	99	-	.	Parent=FBgn0003277.2.mrna1;Target=FBgn0003277.2 1 501 +
Chr1	stalkie_big_nohaplotig	CDS	152359442	152360517	.	-	2	Parent=FBgn0003277.2.mrna1;Target=FBgn0003277.2 4466 5541 +
Chr1	stalkie_big_nohaplotig	CDS	152360588	152360776	.	-	2	Parent=FBgn0003277.2.mrna1;Target=FBgn0003277.2 4277 4465 +
Chr1	stalkie_big_nohaplotig	CDS	152360841	152361942	.	-	0	Parent=FBgn0003277.2.mrna1;Target=FBgn0003277.2 3175 4276 +
Chr1	stalkie_big_nohaplotig	CDS	152362001	152362375	.	-	0	Parent=FBgn0003277.2.mrna1;Target=FBgn0003277.2 2800 3174 +
Chr1	stalkie_big_nohaplotig	CDS	152362435	152363174	.	-	2	Parent=FBgn0003277.2.mrna1;Target=FBgn0003277.2 2060 2799 +
Chr1	stalkie_big_nohaplotig	CDS	152363240	152363840	.	-	0	Parent=FBgn0003277.2.mrna1;Target=FBgn0003277.2 1459 2059 +
Chr1	stalkie_big_nohaplotig	CDS	152363898	152364854	.	-	0	Parent=FBgn0003277.2.mrna1;Target=FBgn0003277.2 502 1458 +
Chr1	stalkie_big_nohaplotig	CDS	152364916	152365416	.	-	0	Parent=FBgn0003277.2.mrna1;Target=FBgn0003277.2 1 501 +
Chr1	gffcl	locus	152367704	152368263	.	+	.	ID=RLOC_00012559;geneIDs=FBgn0030311.1.path1;transcripts=FBgn0030311.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152367704	152368263	.	+	.	ID=FBgn0030311.1.mrna1;geneID=FBgn0030311.1.path1;Name=FBgn0030311.1;Dir=sensecoverage=100.0;identity=98.9;matches=433;mismatches=5;indels=0;unknowns=0;locus=RLOC_00012559
Chr1	stalkie_big_nohaplotig	exon	152367704	152367773	100	+	.	Parent=FBgn0030311.1.mrna1;Target=FBgn0030311.1 1 70 +
Chr1	stalkie_big_nohaplotig	exon	152367831	152368069	99	+	.	Parent=FBgn0030311.1.mrna1;Target=FBgn0030311.1 71 309 +
Chr1	stalkie_big_nohaplotig	exon	152368135	152368263	96	+	.	Parent=FBgn0030311.1.mrna1;Target=FBgn0030311.1 310 438 +
Chr1	stalkie_big_nohaplotig	CDS	152367704	152367773	.	+	0	Parent=FBgn0030311.1.mrna1;Target=FBgn0030311.1 1 70 +
Chr1	stalkie_big_nohaplotig	CDS	152367831	152368069	.	+	2	Parent=FBgn0030311.1.mrna1;Target=FBgn0030311.1 71 309 +
Chr1	stalkie_big_nohaplotig	CDS	152368135	152368263	.	+	0	Parent=FBgn0030311.1.mrna1;Target=FBgn0030311.1 310 438 +
Chr1	gffcl	locus	152368419	152369275	.	-	.	ID=RLOC_00012560;geneIDs=comp154133_c0_seq1.path1;transcripts=comp154133_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152368419	152369275	.	-	.	ID=comp154133_c0_seq1.mrna1;geneID=comp154133_c0_seq1.path1;Name=comp154133_c0_seq1;Dir=antisensecoverage=98.2;identity=98.5;matches=718;mismatches=11;indels=0;unknowns=0;locus=RLOC_00012560
Chr1	stalkie_big_nohaplotig	exon	152368419	152368756	99	-	.	Parent=comp154133_c0_seq1.mrna1;Target=comp154133_c0_seq1 14 351 -
Chr1	stalkie_big_nohaplotig	exon	152368816	152368846	100	-	.	Parent=comp154133_c0_seq1.mrna1;Target=comp154133_c0_seq1 352 382 -
Chr1	stalkie_big_nohaplotig	exon	152368916	152369275	97	-	.	Parent=comp154133_c0_seq1.mrna1;Target=comp154133_c0_seq1 383 742 -
Chr1	stalkie_big_nohaplotig	CDS	152368426	152368756	.	-	1	Parent=comp154133_c0_seq1.mrna1;Target=comp154133_c0_seq1 21 351 .
Chr1	stalkie_big_nohaplotig	CDS	152368816	152368846	.	-	2	Parent=comp154133_c0_seq1.mrna1;Target=comp154133_c0_seq1 352 382 .
Chr1	stalkie_big_nohaplotig	CDS	152368916	152369054	.	-	0	Parent=comp154133_c0_seq1.mrna1;Target=comp154133_c0_seq1 383 521 .
Chr1	gffcl	locus	152369450	152370392	.	-	.	ID=RLOC_00012561;geneIDs=FBgn0025634.1.path1;transcripts=FBgn0025634.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152369450	152370392	.	-	.	ID=FBgn0025634.1.mrna1;geneID=FBgn0025634.1.path1;Name=FBgn0025634.1;Dir=sensecoverage=100.0;identity=99.3;matches=813;mismatches=4;indels=2;unknowns=0;Target=FBgn0025634.1 2 10 +;locus=RLOC_00012561
Chr1	stalkie_big_nohaplotig	exon	152369450	152369625	100	-	.	Parent=FBgn0025634.1.mrna1;Target=FBgn0025634.1 644 819 +
Chr1	stalkie_big_nohaplotig	exon	152369692	152369878	98	-	.	Parent=FBgn0025634.1.mrna1;Target=FBgn0025634.1 457 643 +
Chr1	stalkie_big_nohaplotig	exon	152369939	152370392	99	-	.	Parent=FBgn0025634.1.mrna1;Target=FBgn0025634.1 1 456 +
Chr1	stalkie_big_nohaplotig	CDS	152370385	152370391	.	-	0	Parent=FBgn0025634.1.mrna1
Chr1	gffcl	locus	152372956	152373264	.	+	.	ID=RLOC_00012562;geneIDs=comp145183_c0_seq1.path1;transcripts=comp145183_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152372956	152373264	.	+	.	ID=comp145183_c0_seq1.mrna1;geneID=comp145183_c0_seq1.path1;Name=comp145183_c0_seq1;Dir=indeterminatecoverage=85.2;identity=99.0;matches=307;mismatches=2;indels=1;unknowns=0;Target=comp145183_c0_seq1 310 1 .;CDS_Target=comp145183_c0_seq1 52 2 .;locus=RLOC_00012562
Chr1	stalkie_big_nohaplotig	exon	152372956	152373264	99	+	.	Parent=comp145183_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152372957	152373007	.	+	0	Parent=comp145183_c0_seq1.mrna1
Chr1	gffcl	locus	152429035	152429797	.	-	.	ID=RLOC_00012563;geneIDs=comp151292_c0_seq1.path1;transcripts=comp151292_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152429035	152429797	.	-	.	ID=comp151292_c0_seq1.mrna1;geneID=comp151292_c0_seq1.path1;Name=comp151292_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.5;matches=744;mismatches=7;indels=12;unknowns=0;Target=comp151292_c0_seq1 751 1 .;CDS_Target=comp151292_c0_seq1 205 41 .;locus=RLOC_00012563
Chr1	stalkie_big_nohaplotig	exon	152429035	152429797	97	-	.	Parent=comp151292_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152429593	152429757	.	-	0	Parent=comp151292_c0_seq1.mrna1
Chr1	gffcl	locus	152442845	152443188	.	-	.	ID=RLOC_00012564;geneIDs=comp135288_c0_seq1.path1;transcripts=comp135288_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152442845	152443188	.	-	.	ID=comp135288_c0_seq1.mrna1;geneID=comp135288_c0_seq1.path1;Name=comp135288_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=341;mismatches=3;indels=1;unknowns=0;Target=comp135288_c0_seq1 345 1 .;CDS_Target=comp135288_c0_seq1 261 190 .;locus=RLOC_00012564
Chr1	stalkie_big_nohaplotig	exon	152442845	152443188	98	-	.	Parent=comp135288_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152442929	152443000	.	-	0	Parent=comp135288_c0_seq1.mrna1
Chr1	gffcl	locus	152475103	152501704	.	+	.	ID=RLOC_00012565;geneIDs=FBgn0023215.1.path1;transcripts=FBgn0023215.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152475103	152501704	.	+	.	ID=FBgn0023215.1.mrna1;geneID=FBgn0023215.1.path1;Name=FBgn0023215.1;Dir=sensecoverage=100.0;identity=99.9;matches=2176;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012565
Chr1	stalkie_big_nohaplotig	exon	152475103	152475616	99	+	.	Parent=FBgn0023215.1.mrna1;Target=FBgn0023215.1 1 514 +
Chr1	stalkie_big_nohaplotig	exon	152496487	152497210	100	+	.	Parent=FBgn0023215.1.mrna1;Target=FBgn0023215.1 515 1238 +
Chr1	stalkie_big_nohaplotig	exon	152497673	152497832	100	+	.	Parent=FBgn0023215.1.mrna1;Target=FBgn0023215.1 1239 1398 +
Chr1	stalkie_big_nohaplotig	exon	152497901	152498072	99	+	.	Parent=FBgn0023215.1.mrna1;Target=FBgn0023215.1 1399 1570 +
Chr1	stalkie_big_nohaplotig	exon	152500656	152500774	100	+	.	Parent=FBgn0023215.1.mrna1;Target=FBgn0023215.1 1571 1689 +
Chr1	stalkie_big_nohaplotig	exon	152500873	152501323	100	+	.	Parent=FBgn0023215.1.mrna1;Target=FBgn0023215.1 1690 2140 +
Chr1	stalkie_big_nohaplotig	exon	152501667	152501704	100	+	.	Parent=FBgn0023215.1.mrna1;Target=FBgn0023215.1 2141 2178 +
Chr1	stalkie_big_nohaplotig	CDS	152475103	152475616	.	+	0	Parent=FBgn0023215.1.mrna1;Target=FBgn0023215.1 1 514 +
Chr1	stalkie_big_nohaplotig	CDS	152496487	152497210	.	+	2	Parent=FBgn0023215.1.mrna1;Target=FBgn0023215.1 515 1238 +
Chr1	stalkie_big_nohaplotig	CDS	152497673	152497832	.	+	1	Parent=FBgn0023215.1.mrna1;Target=FBgn0023215.1 1239 1398 +
Chr1	stalkie_big_nohaplotig	CDS	152497901	152498072	.	+	0	Parent=FBgn0023215.1.mrna1;Target=FBgn0023215.1 1399 1570 +
Chr1	stalkie_big_nohaplotig	CDS	152500656	152500774	.	+	2	Parent=FBgn0023215.1.mrna1;Target=FBgn0023215.1 1571 1689 +
Chr1	stalkie_big_nohaplotig	CDS	152500873	152501323	.	+	0	Parent=FBgn0023215.1.mrna1;Target=FBgn0023215.1 1690 2140 +
Chr1	stalkie_big_nohaplotig	CDS	152501667	152501704	.	+	2	Parent=FBgn0023215.1.mrna1;Target=FBgn0023215.1 2141 2178 +
Chr1	gffcl	locus	152506169	152508011	.	.	.	ID=RLOC_00012566;geneIDs=comp160220_c0_seq1.path1,comp391734_c0_seq1.path1;transcripts=comp160220_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152506484	152508011	.	+	.	ID=comp160220_c0_seq1.mrna1;geneID=comp160220_c0_seq1.path1;Name=comp160220_c0_seq1;Dir=indeterminatecoverage=98.7;identity=94.4;matches=1460;mismatches=23;indels=63;unknowns=0;Target=comp160220_c0_seq1 1514 14 .;CDS_Target=comp160220_c0_seq1 526 377 .;locus=RLOC_00012566
Chr1	stalkie_big_nohaplotig	exon	152506484	152508011	94	+	.	Parent=comp160220_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152506837	152506986	.	+	0	Parent=comp160220_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152508220	152508865	.	+	.	ID=comp105362_c0_seq1.mrna1;geneID=comp105362_c0_seq1.path1;Name=comp105362_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=642;mismatches=2;indels=2;unknowns=0;Target=comp105362_c0_seq1 644 1 .;CDS_Target=comp105362_c0_seq1 79 2 .;locus=RLOC_00012567
Chr1	stalkie_big_nohaplotig	exon	152508220	152508865	99	+	.	Parent=comp105362_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152508221	152508300	.	+	0	Parent=comp105362_c0_seq1.mrna1
Chr1	gffcl	locus	152513526	152514926	.	+	.	ID=RLOC_00012568;geneIDs=ORF2362.path1;transcripts=ORF2362.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152513526	152514926	.	+	.	ID=ORF2362.mrna1;geneID=ORF2362.path1;Name=ORF2362;Dir=sensecoverage=99.5;identity=99.4;matches=861;mismatches=5;indels=0;unknowns=0;locus=RLOC_00012568
Chr1	stalkie_big_nohaplotig	exon	152513526	152513936	99	+	.	Parent=ORF2362.mrna1;Target=ORF2362 1 411 +
Chr1	stalkie_big_nohaplotig	exon	152514001	152514117	100	+	.	Parent=ORF2362.mrna1;Target=ORF2362 412 528 +
Chr1	stalkie_big_nohaplotig	exon	152514589	152514926	99	+	.	Parent=ORF2362.mrna1;Target=ORF2362 529 866 +
Chr1	stalkie_big_nohaplotig	CDS	152513526	152513936	.	+	0	Parent=ORF2362.mrna1;Target=ORF2362 1 411 +
Chr1	stalkie_big_nohaplotig	CDS	152514001	152514117	.	+	0	Parent=ORF2362.mrna1;Target=ORF2362 412 528 +
Chr1	stalkie_big_nohaplotig	CDS	152514589	152514924	.	+	0	Parent=ORF2362.mrna1;Target=ORF2362 529 864 +
Chr1	gffcl	locus	152516812	152517620	.	+	.	ID=RLOC_00012569;geneIDs=AGAP013250.1.path1;transcripts=AGAP013250.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152516812	152517620	.	+	.	ID=AGAP013250.1.mrna1;geneID=AGAP013250.1.path1;Name=AGAP013250.1;Dir=sensecoverage=99.7;identity=100.0;matches=721;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012569
Chr1	stalkie_big_nohaplotig	exon	152516812	152517300	100	+	.	Parent=AGAP013250.1.mrna1;Target=AGAP013250.1 1 489 +
Chr1	stalkie_big_nohaplotig	exon	152517389	152517620	100	+	.	Parent=AGAP013250.1.mrna1;Target=AGAP013250.1 490 721 +
Chr1	stalkie_big_nohaplotig	CDS	152516812	152517300	.	+	0	Parent=AGAP013250.1.mrna1;Target=AGAP013250.1 1 489 +
Chr1	stalkie_big_nohaplotig	CDS	152517389	152517619	.	+	0	Parent=AGAP013250.1.mrna1;Target=AGAP013250.1 490 720 +
Chr1	gffcl	locus	152518869	152519824	.	-	.	ID=RLOC_00012570;geneIDs=ORF2860.path1;transcripts=ORF2860.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152518869	152519824	.	-	.	ID=ORF2860.mrna1;geneID=ORF2860.path1;Name=ORF2860;Dir=sensecoverage=100.0;identity=99.1;matches=788;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012570
Chr1	stalkie_big_nohaplotig	exon	152518869	152519169	99	-	.	Parent=ORF2860.mrna1;Target=ORF2860 495 795 +
Chr1	stalkie_big_nohaplotig	exon	152519225	152519365	97	-	.	Parent=ORF2860.mrna1;Target=ORF2860 354 494 +
Chr1	stalkie_big_nohaplotig	exon	152519415	152519528	99	-	.	Parent=ORF2860.mrna1;Target=ORF2860 240 353 +
Chr1	stalkie_big_nohaplotig	exon	152519586	152519824	99	-	.	Parent=ORF2860.mrna1;Target=ORF2860 1 239 +
Chr1	stalkie_big_nohaplotig	CDS	152518869	152519169	.	-	1	Parent=ORF2860.mrna1;Target=ORF2860 495 795 +
Chr1	stalkie_big_nohaplotig	CDS	152519225	152519365	.	-	1	Parent=ORF2860.mrna1;Target=ORF2860 354 494 +
Chr1	stalkie_big_nohaplotig	CDS	152519415	152519528	.	-	1	Parent=ORF2860.mrna1;Target=ORF2860 240 353 +
Chr1	stalkie_big_nohaplotig	CDS	152519586	152519824	.	-	0	Parent=ORF2860.mrna1;Target=ORF2860 1 239 +
Chr1	gffcl	locus	152521632	152523706	.	+	.	ID=RLOC_00012571;geneIDs=ORF1189.path1;transcripts=ORF1189.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152521632	152523706	.	+	.	ID=ORF1189.mrna1;geneID=ORF1189.path1;Name=ORF1189;Dir=sensecoverage=100.0;identity=98.5;matches=1176;mismatches=18;indels=0;unknowns=0;locus=RLOC_00012571
Chr1	stalkie_big_nohaplotig	exon	152521632	152522054	98	+	.	Parent=ORF1189.mrna1;Target=ORF1189 1 423 +
Chr1	stalkie_big_nohaplotig	exon	152522121	152522525	98	+	.	Parent=ORF1189.mrna1;Target=ORF1189 424 828 +
Chr1	stalkie_big_nohaplotig	exon	152522579	152522665	100	+	.	Parent=ORF1189.mrna1;Target=ORF1189 829 915 +
Chr1	stalkie_big_nohaplotig	exon	152523428	152523706	97	+	.	Parent=ORF1189.mrna1;Target=ORF1189 916 1194 +
Chr1	stalkie_big_nohaplotig	CDS	152521632	152522054	.	+	0	Parent=ORF1189.mrna1;Target=ORF1189 1 423 +
Chr1	stalkie_big_nohaplotig	CDS	152522121	152522525	.	+	0	Parent=ORF1189.mrna1;Target=ORF1189 424 828 +
Chr1	stalkie_big_nohaplotig	CDS	152522579	152522665	.	+	0	Parent=ORF1189.mrna1;Target=ORF1189 829 915 +
Chr1	stalkie_big_nohaplotig	CDS	152523428	152523706	.	+	0	Parent=ORF1189.mrna1;Target=ORF1189 916 1194 +
Chr1	gffcl	locus	152524789	152533463	.	-	.	ID=RLOC_00012572;geneIDs=FBgn0020653.2.path1;transcripts=FBgn0020653.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152524789	152533463	.	-	.	ID=FBgn0020653.2.mrna1;geneID=FBgn0020653.2.path1;Name=FBgn0020653.2;Dir=sensecoverage=100.0;identity=99.5;matches=1535;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012572
Chr1	stalkie_big_nohaplotig	exon	152524789	152524915	99	-	.	Parent=FBgn0020653.2.mrna1;Target=FBgn0020653.2 1416 1542 +
Chr1	stalkie_big_nohaplotig	exon	152524983	152525739	99	-	.	Parent=FBgn0020653.2.mrna1;Target=FBgn0020653.2 659 1415 +
Chr1	stalkie_big_nohaplotig	exon	152525804	152526030	99	-	.	Parent=FBgn0020653.2.mrna1;Target=FBgn0020653.2 432 658 +
Chr1	stalkie_big_nohaplotig	exon	152526102	152526232	99	-	.	Parent=FBgn0020653.2.mrna1;Target=FBgn0020653.2 301 431 +
Chr1	stalkie_big_nohaplotig	exon	152526296	152526513	100	-	.	Parent=FBgn0020653.2.mrna1;Target=FBgn0020653.2 83 300 +
Chr1	stalkie_big_nohaplotig	exon	152533382	152533463	100	-	.	Parent=FBgn0020653.2.mrna1;Target=FBgn0020653.2 1 82 +
Chr1	stalkie_big_nohaplotig	CDS	152524789	152524915	.	-	1	Parent=FBgn0020653.2.mrna1;Target=FBgn0020653.2 1416 1542 +
Chr1	stalkie_big_nohaplotig	CDS	152524983	152525739	.	-	2	Parent=FBgn0020653.2.mrna1;Target=FBgn0020653.2 659 1415 +
Chr1	stalkie_big_nohaplotig	CDS	152525804	152526030	.	-	1	Parent=FBgn0020653.2.mrna1;Target=FBgn0020653.2 432 658 +
Chr1	stalkie_big_nohaplotig	CDS	152526102	152526232	.	-	0	Parent=FBgn0020653.2.mrna1;Target=FBgn0020653.2 301 431 +
Chr1	stalkie_big_nohaplotig	CDS	152526296	152526513	.	-	2	Parent=FBgn0020653.2.mrna1;Target=FBgn0020653.2 83 300 +
Chr1	stalkie_big_nohaplotig	CDS	152533382	152533463	.	-	0	Parent=FBgn0020653.2.mrna1;Target=FBgn0020653.2 1 82 +
Chr1	gffcl	locus	152533182	152536585	.	+	.	ID=RLOC_00012573;geneIDs=FBgn0030026.3.path1;transcripts=FBgn0030026.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152533182	152536585	.	+	.	ID=FBgn0030026.3.mrna1;geneID=FBgn0030026.3.path1;Name=FBgn0030026.3;Dir=sensecoverage=100.0;identity=99.9;matches=767;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012573
Chr1	stalkie_big_nohaplotig	exon	152533182	152533334	99	+	.	Parent=FBgn0030026.3.mrna1;Target=FBgn0030026.3 1 153 +
Chr1	stalkie_big_nohaplotig	exon	152535781	152535832	100	+	.	Parent=FBgn0030026.3.mrna1;Target=FBgn0030026.3 154 205 +
Chr1	stalkie_big_nohaplotig	exon	152535902	152536092	100	+	.	Parent=FBgn0030026.3.mrna1;Target=FBgn0030026.3 206 396 +
Chr1	stalkie_big_nohaplotig	exon	152536156	152536305	100	+	.	Parent=FBgn0030026.3.mrna1;Target=FBgn0030026.3 397 546 +
Chr1	stalkie_big_nohaplotig	exon	152536364	152536585	100	+	.	Parent=FBgn0030026.3.mrna1;Target=FBgn0030026.3 547 768 +
Chr1	stalkie_big_nohaplotig	CDS	152533182	152533334	.	+	0	Parent=FBgn0030026.3.mrna1;Target=FBgn0030026.3 1 153 +
Chr1	stalkie_big_nohaplotig	CDS	152535781	152535832	.	+	0	Parent=FBgn0030026.3.mrna1;Target=FBgn0030026.3 154 205 +
Chr1	stalkie_big_nohaplotig	CDS	152535902	152536092	.	+	2	Parent=FBgn0030026.3.mrna1;Target=FBgn0030026.3 206 396 +
Chr1	stalkie_big_nohaplotig	CDS	152536156	152536305	.	+	0	Parent=FBgn0030026.3.mrna1;Target=FBgn0030026.3 397 546 +
Chr1	stalkie_big_nohaplotig	CDS	152536364	152536585	.	+	0	Parent=FBgn0030026.3.mrna1;Target=FBgn0030026.3 547 768 +
Chr1	gffcl	locus	152543811	152545066	.	-	.	ID=RLOC_00012575;geneIDs=FBgn0030026.2.path1;transcripts=FBgn0030026.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152543811	152545066	.	-	.	ID=FBgn0030026.2.mrna1;geneID=FBgn0030026.2.path1;Name=FBgn0030026.2;Dir=sensecoverage=100.0;identity=100.0;matches=873;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012575
Chr1	stalkie_big_nohaplotig	exon	152543811	152544032	100	-	.	Parent=FBgn0030026.2.mrna1;Target=FBgn0030026.2 652 873 +
Chr1	stalkie_big_nohaplotig	exon	152544089	152544238	100	-	.	Parent=FBgn0030026.2.mrna1;Target=FBgn0030026.2 502 651 +
Chr1	stalkie_big_nohaplotig	exon	152544292	152544482	100	-	.	Parent=FBgn0030026.2.mrna1;Target=FBgn0030026.2 311 501 +
Chr1	stalkie_big_nohaplotig	exon	152544550	152544601	100	-	.	Parent=FBgn0030026.2.mrna1;Target=FBgn0030026.2 259 310 +
Chr1	stalkie_big_nohaplotig	exon	152544809	152545066	100	-	.	Parent=FBgn0030026.2.mrna1;Target=FBgn0030026.2 1 258 +
Chr1	stalkie_big_nohaplotig	CDS	152543811	152544032	.	-	0	Parent=FBgn0030026.2.mrna1;Target=FBgn0030026.2 652 873 +
Chr1	stalkie_big_nohaplotig	CDS	152544089	152544238	.	-	0	Parent=FBgn0030026.2.mrna1;Target=FBgn0030026.2 502 651 +
Chr1	stalkie_big_nohaplotig	CDS	152544292	152544482	.	-	2	Parent=FBgn0030026.2.mrna1;Target=FBgn0030026.2 311 501 +
Chr1	stalkie_big_nohaplotig	CDS	152544550	152544601	.	-	0	Parent=FBgn0030026.2.mrna1;Target=FBgn0030026.2 259 310 +
Chr1	stalkie_big_nohaplotig	CDS	152544809	152545066	.	-	0	Parent=FBgn0030026.2.mrna1;Target=FBgn0030026.2 1 258 +
Chr1	gffcl	locus	152545658	152546917	.	+	.	ID=RLOC_00012576;geneIDs=comp156561_c0_seq1.path1;transcripts=comp156561_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152545658	152546917	.	+	.	ID=comp156561_c0_seq1.mrna1;geneID=comp156561_c0_seq1.path1;Name=comp156561_c0_seq1;Dir=sensecoverage=99.0;identity=96.6;matches=879;mismatches=22;indels=9;unknowns=0;locus=RLOC_00012576
Chr1	stalkie_big_nohaplotig	exon	152545658	152545945	96	+	.	Parent=comp156561_c0_seq1.mrna1;Target=comp156561_c0_seq1 1 287 +
Chr1	stalkie_big_nohaplotig	exon	152546214	152546534	96	+	.	Parent=comp156561_c0_seq1.mrna1;Target=comp156561_c0_seq1 288 603 +
Chr1	stalkie_big_nohaplotig	exon	152546617	152546917	96	+	.	Parent=comp156561_c0_seq1.mrna1;Target=comp156561_c0_seq1 604 901 +
Chr1	stalkie_big_nohaplotig	CDS	152546495	152546534	.	+	0	Parent=comp156561_c0_seq1.mrna1;Target=comp156561_c0_seq1 564 603 +
Chr1	stalkie_big_nohaplotig	CDS	152546617	152546741	.	+	2	Parent=comp156561_c0_seq1.mrna1;Target=comp156561_c0_seq1 604 728 +
Chr1	gffcl	locus	152548386	152549368	.	+	.	ID=RLOC_00012577;geneIDs=FBgn0030026.1.path1;transcripts=FBgn0030026.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152548386	152549368	.	+	.	ID=FBgn0030026.1.mrna1;geneID=FBgn0030026.1.path1;Name=FBgn0030026.1;Dir=sensecoverage=100.0;identity=99.9;matches=746;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012577
Chr1	stalkie_big_nohaplotig	exon	152548386	152548517	100	+	.	Parent=FBgn0030026.1.mrna1;Target=FBgn0030026.1 1 132 +
Chr1	stalkie_big_nohaplotig	exon	152548572	152548623	98	+	.	Parent=FBgn0030026.1.mrna1;Target=FBgn0030026.1 133 184 +
Chr1	stalkie_big_nohaplotig	exon	152548680	152548870	100	+	.	Parent=FBgn0030026.1.mrna1;Target=FBgn0030026.1 185 375 +
Chr1	stalkie_big_nohaplotig	exon	152548933	152549082	100	+	.	Parent=FBgn0030026.1.mrna1;Target=FBgn0030026.1 376 525 +
Chr1	stalkie_big_nohaplotig	exon	152549147	152549368	100	+	.	Parent=FBgn0030026.1.mrna1;Target=FBgn0030026.1 526 747 +
Chr1	stalkie_big_nohaplotig	CDS	152548386	152548517	.	+	0	Parent=FBgn0030026.1.mrna1;Target=FBgn0030026.1 1 132 +
Chr1	stalkie_big_nohaplotig	CDS	152548572	152548623	.	+	0	Parent=FBgn0030026.1.mrna1;Target=FBgn0030026.1 133 184 +
Chr1	stalkie_big_nohaplotig	CDS	152548680	152548870	.	+	2	Parent=FBgn0030026.1.mrna1;Target=FBgn0030026.1 185 375 +
Chr1	stalkie_big_nohaplotig	CDS	152548933	152549082	.	+	0	Parent=FBgn0030026.1.mrna1;Target=FBgn0030026.1 376 525 +
Chr1	stalkie_big_nohaplotig	CDS	152549147	152549368	.	+	0	Parent=FBgn0030026.1.mrna1;Target=FBgn0030026.1 526 747 +
Chr1	gffcl	locus	152550242	152551183	.	-	.	ID=RLOC_00012578;geneIDs=ORF2792.path1;transcripts=ORF2792.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152550242	152551183	.	-	.	ID=ORF2792.mrna1;geneID=ORF2792.path1;Name=ORF2792;Dir=sensecoverage=100.0;identity=99.9;matches=803;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012578
Chr1	stalkie_big_nohaplotig	exon	152550242	152550519	100	-	.	Parent=ORF2792.mrna1;Target=ORF2792 527 804 +
Chr1	stalkie_big_nohaplotig	exon	152550595	152551038	99	-	.	Parent=ORF2792.mrna1;Target=ORF2792 83 526 +
Chr1	stalkie_big_nohaplotig	exon	152551102	152551183	100	-	.	Parent=ORF2792.mrna1;Target=ORF2792 1 82 +
Chr1	stalkie_big_nohaplotig	CDS	152550242	152550519	.	-	2	Parent=ORF2792.mrna1;Target=ORF2792 527 804 +
Chr1	stalkie_big_nohaplotig	CDS	152550595	152551038	.	-	2	Parent=ORF2792.mrna1;Target=ORF2792 83 526 +
Chr1	stalkie_big_nohaplotig	CDS	152551102	152551183	.	-	0	Parent=ORF2792.mrna1;Target=ORF2792 1 82 +
Chr1	gffcl	locus	152552385	152553649	.	-	.	ID=RLOC_00012579;geneIDs=FBgn0030474.1.path1;transcripts=FBgn0030474.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152552385	152553649	.	-	.	ID=FBgn0030474.1.mrna1;geneID=FBgn0030474.1.path1;Name=FBgn0030474.1;Dir=sensecoverage=100.0;identity=99.5;matches=1200;mismatches=6;indels=0;unknowns=0;locus=RLOC_00012579
Chr1	stalkie_big_nohaplotig	exon	152552385	152553546	99	-	.	Parent=FBgn0030474.1.mrna1;Target=FBgn0030474.1 45 1206 +
Chr1	stalkie_big_nohaplotig	exon	152553606	152553649	100	-	.	Parent=FBgn0030474.1.mrna1;Target=FBgn0030474.1 1 44 +
Chr1	stalkie_big_nohaplotig	CDS	152552385	152553546	.	-	1	Parent=FBgn0030474.1.mrna1;Target=FBgn0030474.1 45 1206 +
Chr1	stalkie_big_nohaplotig	CDS	152553606	152553649	.	-	0	Parent=FBgn0030474.1.mrna1;Target=FBgn0030474.1 1 44 +
Chr1	gffcl	locus	152556488	152557165	.	-	.	ID=RLOC_00012581;geneIDs=comp138417_c0_seq1.path1;transcripts=comp138417_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152556488	152557165	.	-	.	ID=comp138417_c0_seq1.mrna1;geneID=comp138417_c0_seq1.path1;Name=comp138417_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=662;mismatches=12;indels=4;unknowns=0;Target=comp138417_c0_seq1 674 1 .;CDS_Target=comp138417_c0_seq1 264 220 .;locus=RLOC_00012581
Chr1	stalkie_big_nohaplotig	exon	152556488	152557165	97	-	.	Parent=comp138417_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152556898	152556942	.	-	0	Parent=comp138417_c0_seq1.mrna1
Chr1	gffcl	locus	152583463	152583943	.	-	.	ID=RLOC_00012582;geneIDs=comp147617_c0_seq1.path1;transcripts=comp147617_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152583463	152583943	.	-	.	ID=comp147617_c0_seq1.mrna1;geneID=comp147617_c0_seq1.path1;Name=comp147617_c0_seq1;Dir=indeterminatecoverage=95.6;identity=99.8;matches=481;mismatches=0;indels=1;unknowns=0;Target=comp147617_c0_seq1 504 23 .;CDS_Target=comp147617_c0_seq1 66 25 .;locus=RLOC_00012582
Chr1	stalkie_big_nohaplotig	exon	152583463	152583943	99	-	.	Parent=comp147617_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152583901	152583941	.	-	0	Parent=comp147617_c0_seq1.mrna1
Chr1	gffcl	locus	152595848	152597131	.	+	.	ID=RLOC_00012583;geneIDs=FBgn0035157.2.path1;transcripts=FBgn0035157.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152595848	152597131	.	+	.	ID=FBgn0035157.2.mrna1;geneID=FBgn0035157.2.path1;Name=FBgn0035157.2;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1283;mismatches=1;indels=0;unknowns=0;Target=FBgn0035157.2 1284 1 .;locus=RLOC_00012583
Chr1	stalkie_big_nohaplotig	exon	152595848	152597131	99	+	.	Parent=FBgn0035157.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152595848	152597131	.	+	0	Parent=FBgn0035157.2.mrna1
Chr1	gffcl	locus	152603390	152604132	.	+	.	ID=RLOC_00012584;geneIDs=comp148286_c0_seq1.path1;transcripts=comp148286_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152603390	152604132	.	+	.	ID=comp148286_c0_seq1.mrna1;geneID=comp148286_c0_seq1.path1;Name=comp148286_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.7;matches=742;mismatches=1;indels=1;unknowns=0;Target=comp148286_c0_seq1 744 1 .;CDS_Target=comp148286_c0_seq1 635 90 .;locus=RLOC_00012584
Chr1	stalkie_big_nohaplotig	exon	152603390	152604132	99	+	.	Parent=comp148286_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152603478	152604023	.	+	0	Parent=comp148286_c0_seq1.mrna1
Chr1	gffcl	locus	152609635	152611075	.	-	.	ID=RLOC_00012585;geneIDs=comp157866_c0_seq1.path1;transcripts=comp157866_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152609635	152611075	.	-	.	ID=comp157866_c0_seq1.mrna1;geneID=comp157866_c0_seq1.path1;Name=comp157866_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=1337;mismatches=21;indels=8;unknowns=0;Target=comp157866_c0_seq1 1300 1133 .;locus=RLOC_00012585
Chr1	stalkie_big_nohaplotig	exon	152609635	152610291	98	-	.	Parent=comp157866_c0_seq1.mrna1;Target=comp157866_c0_seq1 1364 708 .
Chr1	stalkie_big_nohaplotig	exon	152610373	152611075	97	-	.	Parent=comp157866_c0_seq1.mrna1;Target=comp157866_c0_seq1 707 1 .
Chr1	stalkie_big_nohaplotig	CDS	152609699	152609866	.	-	0	Parent=comp157866_c0_seq1.mrna1
Chr1	gffcl	locus	152609686	152610855	.	+	.	ID=RLOC_00012586;geneIDs=ORF1466.path1;transcripts=ORF1466.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152609686	152610855	.	+	.	ID=ORF1466.mrna1;geneID=ORF1466.path1;Name=ORF1466;Dir=indeterminatecoverage=100.0;identity=97.7;matches=1070;mismatches=19;indels=6;unknowns=0;locus=RLOC_00012586
Chr1	stalkie_big_nohaplotig	exon	152609686	152610291	98	+	.	Parent=ORF1466.mrna1;Target=ORF1466 606 1 .
Chr1	stalkie_big_nohaplotig	exon	152610373	152610855	96	+	.	Parent=ORF1466.mrna1;Target=ORF1466 1095 607 .
Chr1	stalkie_big_nohaplotig	CDS	152609686	152610291	.	+	0	Parent=ORF1466.mrna1;Target=ORF1466 606 1 .
Chr1	stalkie_big_nohaplotig	CDS	152610373	152610855	.	+	0	Parent=ORF1466.mrna1;Target=ORF1466 1095 607 .
Chr1	gffcl	locus	152638300	152640222	.	+	.	ID=RLOC_00012587;geneIDs=FBgn0030828.1.path1;transcripts=FBgn0030828.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152638300	152640222	.	+	.	ID=FBgn0030828.1.mrna1;geneID=FBgn0030828.1.path1;Name=FBgn0030828.1;Dir=sensecoverage=100.0;identity=98.9;matches=1214;mismatches=13;indels=0;unknowns=0;locus=RLOC_00012587
Chr1	stalkie_big_nohaplotig	exon	152638300	152638564	99	+	.	Parent=FBgn0030828.1.mrna1;Target=FBgn0030828.1 1 265 +
Chr1	stalkie_big_nohaplotig	exon	152638631	152638890	99	+	.	Parent=FBgn0030828.1.mrna1;Target=FBgn0030828.1 266 525 +
Chr1	stalkie_big_nohaplotig	exon	152639521	152640222	98	+	.	Parent=FBgn0030828.1.mrna1;Target=FBgn0030828.1 526 1227 +
Chr1	stalkie_big_nohaplotig	CDS	152638300	152638564	.	+	0	Parent=FBgn0030828.1.mrna1;Target=FBgn0030828.1 1 265 +
Chr1	stalkie_big_nohaplotig	CDS	152638631	152638890	.	+	2	Parent=FBgn0030828.1.mrna1;Target=FBgn0030828.1 266 525 +
Chr1	stalkie_big_nohaplotig	CDS	152639521	152640222	.	+	0	Parent=FBgn0030828.1.mrna1;Target=FBgn0030828.1 526 1227 +
Chr1	gffcl	locus	152645424	152663878	.	+	.	ID=RLOC_00012588;geneIDs=FBgn0030349.1.path1;transcripts=FBgn0030349.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152645424	152663878	.	+	.	ID=FBgn0030349.1.mrna1;geneID=FBgn0030349.1.path1;Name=FBgn0030349.1;Dir=sensecoverage=100.0;identity=99.1;matches=3157;mismatches=18;indels=10;unknowns=0;Target=FBgn0030349.1 1001 1021 +;locus=RLOC_00012588
Chr1	stalkie_big_nohaplotig	exon	152645424	152645490	100	+	.	Parent=FBgn0030349.1.mrna1;Target=FBgn0030349.1 1 67 +
Chr1	stalkie_big_nohaplotig	exon	152649543	152650045	100	+	.	Parent=FBgn0030349.1.mrna1;Target=FBgn0030349.1 68 570 +
Chr1	stalkie_big_nohaplotig	exon	152658997	152659238	97	+	.	Parent=FBgn0030349.1.mrna1;Target=FBgn0030349.1 571 810 +
Chr1	stalkie_big_nohaplotig	exon	152659310	152659471	96	+	.	Parent=FBgn0030349.1.mrna1;Target=FBgn0030349.1 811 971 +
Chr1	stalkie_big_nohaplotig	exon	152659546	152659717	95	+	.	Parent=FBgn0030349.1.mrna1;Target=FBgn0030349.1 972 1140 +
Chr1	stalkie_big_nohaplotig	exon	152660413	152660468	100	+	.	Parent=FBgn0030349.1.mrna1;Target=FBgn0030349.1 1141 1196 +
Chr1	stalkie_big_nohaplotig	exon	152660527	152660685	100	+	.	Parent=FBgn0030349.1.mrna1;Target=FBgn0030349.1 1197 1355 +
Chr1	stalkie_big_nohaplotig	exon	152660766	152660926	100	+	.	Parent=FBgn0030349.1.mrna1;Target=FBgn0030349.1 1356 1516 +
Chr1	stalkie_big_nohaplotig	exon	152661004	152661242	100	+	.	Parent=FBgn0030349.1.mrna1;Target=FBgn0030349.1 1517 1755 +
Chr1	stalkie_big_nohaplotig	exon	152661310	152661931	99	+	.	Parent=FBgn0030349.1.mrna1;Target=FBgn0030349.1 1756 2377 +
Chr1	stalkie_big_nohaplotig	exon	152661994	152662199	99	+	.	Parent=FBgn0030349.1.mrna1;Target=FBgn0030349.1 2378 2583 +
Chr1	stalkie_big_nohaplotig	exon	152662273	152662398	100	+	.	Parent=FBgn0030349.1.mrna1;Target=FBgn0030349.1 2584 2709 +
Chr1	stalkie_big_nohaplotig	exon	152662462	152662617	99	+	.	Parent=FBgn0030349.1.mrna1;Target=FBgn0030349.1 2710 2865 +
Chr1	stalkie_big_nohaplotig	exon	152663567	152663878	99	+	.	Parent=FBgn0030349.1.mrna1;Target=FBgn0030349.1 2866 3177 +
Chr1	stalkie_big_nohaplotig	CDS	152659577	152659597	.	+	0	Parent=FBgn0030349.1.mrna1
Chr1	gffcl	locus	152667330	152671528	.	+	.	ID=RLOC_00012589;geneIDs=FBgn0030348.1.path1;transcripts=FBgn0030348.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152667330	152671528	.	+	.	ID=FBgn0030348.1.mrna1;geneID=FBgn0030348.1.path1;Name=FBgn0030348.1;Dir=sensecoverage=100.0;identity=99.2;matches=991;mismatches=8;indels=0;unknowns=0;locus=RLOC_00012589
Chr1	stalkie_big_nohaplotig	exon	152667330	152667419	100	+	.	Parent=FBgn0030348.1.mrna1;Target=FBgn0030348.1 1 90 +
Chr1	stalkie_big_nohaplotig	exon	152670379	152670475	97	+	.	Parent=FBgn0030348.1.mrna1;Target=FBgn0030348.1 91 187 +
Chr1	stalkie_big_nohaplotig	exon	152670530	152670693	98	+	.	Parent=FBgn0030348.1.mrna1;Target=FBgn0030348.1 188 351 +
Chr1	stalkie_big_nohaplotig	exon	152670744	152670878	99	+	.	Parent=FBgn0030348.1.mrna1;Target=FBgn0030348.1 352 486 +
Chr1	stalkie_big_nohaplotig	exon	152670949	152671156	100	+	.	Parent=FBgn0030348.1.mrna1;Target=FBgn0030348.1 487 694 +
Chr1	stalkie_big_nohaplotig	exon	152671224	152671528	99	+	.	Parent=FBgn0030348.1.mrna1;Target=FBgn0030348.1 695 999 +
Chr1	stalkie_big_nohaplotig	CDS	152667330	152667419	.	+	0	Parent=FBgn0030348.1.mrna1;Target=FBgn0030348.1 1 90 +
Chr1	stalkie_big_nohaplotig	CDS	152670379	152670475	.	+	0	Parent=FBgn0030348.1.mrna1;Target=FBgn0030348.1 91 187 +
Chr1	stalkie_big_nohaplotig	CDS	152670530	152670693	.	+	2	Parent=FBgn0030348.1.mrna1;Target=FBgn0030348.1 188 351 +
Chr1	stalkie_big_nohaplotig	CDS	152670744	152670878	.	+	0	Parent=FBgn0030348.1.mrna1;Target=FBgn0030348.1 352 486 +
Chr1	stalkie_big_nohaplotig	CDS	152670949	152671156	.	+	0	Parent=FBgn0030348.1.mrna1;Target=FBgn0030348.1 487 694 +
Chr1	stalkie_big_nohaplotig	CDS	152671224	152671528	.	+	2	Parent=FBgn0030348.1.mrna1;Target=FBgn0030348.1 695 999 +
Chr1	gffcl	locus	152668113	152668928	.	-	.	ID=RLOC_00012590;geneIDs=ORF2729.path1;transcripts=ORF2729.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152668113	152668928	.	-	.	ID=ORF2729.mrna1;geneID=ORF2729.path1;Name=ORF2729;Dir=indeterminatecoverage=100.0;identity=99.1;matches=809;mismatches=7;indels=0;unknowns=0;Target=ORF2729 816 1 .;locus=RLOC_00012590
Chr1	stalkie_big_nohaplotig	exon	152668113	152668928	99	-	.	Parent=ORF2729.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152668113	152668928	.	-	0	Parent=ORF2729.mrna1
Chr1	gffcl	locus	152671661	152676313	.	.	.	ID=RLOC_00012591;geneIDs=FBgn0030347.1.path1,comp154537_c0_seq1.path1;transcripts=FBgn0030347.1.mrna1,comp154537_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152671661	152676313	.	-	.	ID=FBgn0030347.1.mrna1;geneID=FBgn0030347.1.path1;Name=FBgn0030347.1;Dir=sensecoverage=100.0;identity=98.9;matches=952;mismatches=11;indels=0;unknowns=0;locus=RLOC_00012591
Chr1	stalkie_big_nohaplotig	exon	152671661	152672197	98	-	.	Parent=FBgn0030347.1.mrna1;Target=FBgn0030347.1 427 963 +
Chr1	stalkie_big_nohaplotig	exon	152672263	152672397	99	-	.	Parent=FBgn0030347.1.mrna1;Target=FBgn0030347.1 292 426 +
Chr1	stalkie_big_nohaplotig	exon	152672472	152672632	100	-	.	Parent=FBgn0030347.1.mrna1;Target=FBgn0030347.1 131 291 +
Chr1	stalkie_big_nohaplotig	exon	152672695	152672797	99	-	.	Parent=FBgn0030347.1.mrna1;Target=FBgn0030347.1 28 130 +
Chr1	stalkie_big_nohaplotig	exon	152676287	152676313	100	-	.	Parent=FBgn0030347.1.mrna1;Target=FBgn0030347.1 1 27 +
Chr1	stalkie_big_nohaplotig	CDS	152671661	152672197	.	-	0	Parent=FBgn0030347.1.mrna1;Target=FBgn0030347.1 427 963 +
Chr1	stalkie_big_nohaplotig	CDS	152672263	152672397	.	-	0	Parent=FBgn0030347.1.mrna1;Target=FBgn0030347.1 292 426 +
Chr1	stalkie_big_nohaplotig	CDS	152672472	152672632	.	-	2	Parent=FBgn0030347.1.mrna1;Target=FBgn0030347.1 131 291 +
Chr1	stalkie_big_nohaplotig	CDS	152672695	152672797	.	-	0	Parent=FBgn0030347.1.mrna1;Target=FBgn0030347.1 28 130 +
Chr1	stalkie_big_nohaplotig	CDS	152676287	152676313	.	-	0	Parent=FBgn0030347.1.mrna1;Target=FBgn0030347.1 1 27 +
Chr1	stalkie_big_nohaplotig	mRNA	152672774	152674241	.	+	.	ID=comp154537_c0_seq1.mrna1;geneID=comp154537_c0_seq1.path1;Name=comp154537_c0_seq1;Dir=indeterminatecoverage=99.0;identity=91.6;matches=1418;mismatches=47;indels=83;unknowns=0;Target=comp154537_c0_seq1 1545 1 .;CDS_Target=comp154537_c0_seq1 594 316 .;locus=RLOC_00012591
Chr1	stalkie_big_nohaplotig	exon	152672774	152674241	91	+	.	Parent=comp154537_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152673060	152673338	.	+	0	Parent=comp154537_c0_seq1.mrna1
Chr1	gffcl	locus	152679224	152680159	.	+	.	ID=RLOC_00012592;geneIDs=FBgn0030346.1.path1;transcripts=FBgn0030346.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152679224	152680159	.	+	.	ID=FBgn0030346.1.mrna1;geneID=FBgn0030346.1.path1;Name=FBgn0030346.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=931;mismatches=5;indels=0;unknowns=0;Target=FBgn0030346.1 936 1 .;locus=RLOC_00012592
Chr1	stalkie_big_nohaplotig	exon	152679224	152680159	99	+	.	Parent=FBgn0030346.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152679224	152680159	.	+	0	Parent=FBgn0030346.1.mrna1
Chr1	gffcl	locus	152681502	152682629	.	-	.	ID=RLOC_00012593;geneIDs=FBgn0030345.1.path1;transcripts=FBgn0030345.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152681502	152682629	.	-	.	ID=FBgn0030345.1.mrna1;geneID=FBgn0030345.1.path1;Name=FBgn0030345.1;Dir=sensecoverage=100.0;identity=99.1;matches=975;mismatches=9;indels=0;unknowns=0;locus=RLOC_00012593
Chr1	stalkie_big_nohaplotig	exon	152681502	152681841	99	-	.	Parent=FBgn0030345.1.mrna1;Target=FBgn0030345.1 645 984 +
Chr1	stalkie_big_nohaplotig	exon	152681903	152682252	98	-	.	Parent=FBgn0030345.1.mrna1;Target=FBgn0030345.1 295 644 +
Chr1	stalkie_big_nohaplotig	exon	152682336	152682629	99	-	.	Parent=FBgn0030345.1.mrna1;Target=FBgn0030345.1 1 294 +
Chr1	stalkie_big_nohaplotig	CDS	152681502	152681841	.	-	1	Parent=FBgn0030345.1.mrna1;Target=FBgn0030345.1 645 984 +
Chr1	stalkie_big_nohaplotig	CDS	152681903	152682252	.	-	0	Parent=FBgn0030345.1.mrna1;Target=FBgn0030345.1 295 644 +
Chr1	stalkie_big_nohaplotig	CDS	152682336	152682629	.	-	0	Parent=FBgn0030345.1.mrna1;Target=FBgn0030345.1 1 294 +
Chr1	gffcl	locus	152685929	152696186	.	-	.	ID=RLOC_00012594;geneIDs=FBgn0030581.1.path1;transcripts=FBgn0030581.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152685929	152696186	.	-	.	ID=FBgn0030581.1.mrna1;geneID=FBgn0030581.1.path1;Name=FBgn0030581.1;Dir=sensecoverage=100.0;identity=99.4;matches=1769;mismatches=10;indels=0;unknowns=0;locus=RLOC_00012594
Chr1	stalkie_big_nohaplotig	exon	152685929	152686043	100	-	.	Parent=FBgn0030581.1.mrna1;Target=FBgn0030581.1 1665 1779 +
Chr1	stalkie_big_nohaplotig	exon	152686750	152687781	99	-	.	Parent=FBgn0030581.1.mrna1;Target=FBgn0030581.1 633 1664 +
Chr1	stalkie_big_nohaplotig	exon	152687875	152687946	98	-	.	Parent=FBgn0030581.1.mrna1;Target=FBgn0030581.1 561 632 +
Chr1	stalkie_big_nohaplotig	exon	152690312	152690447	97	-	.	Parent=FBgn0030581.1.mrna1;Target=FBgn0030581.1 425 560 +
Chr1	stalkie_big_nohaplotig	exon	152690508	152690661	99	-	.	Parent=FBgn0030581.1.mrna1;Target=FBgn0030581.1 271 424 +
Chr1	stalkie_big_nohaplotig	exon	152690728	152690856	100	-	.	Parent=FBgn0030581.1.mrna1;Target=FBgn0030581.1 142 270 +
Chr1	stalkie_big_nohaplotig	exon	152695596	152695658	100	-	.	Parent=FBgn0030581.1.mrna1;Target=FBgn0030581.1 79 141 +
Chr1	stalkie_big_nohaplotig	exon	152696109	152696186	100	-	.	Parent=FBgn0030581.1.mrna1;Target=FBgn0030581.1 1 78 +
Chr1	stalkie_big_nohaplotig	CDS	152685929	152686043	.	-	1	Parent=FBgn0030581.1.mrna1;Target=FBgn0030581.1 1665 1779 +
Chr1	stalkie_big_nohaplotig	CDS	152686750	152687781	.	-	1	Parent=FBgn0030581.1.mrna1;Target=FBgn0030581.1 633 1664 +
Chr1	stalkie_big_nohaplotig	CDS	152687875	152687946	.	-	1	Parent=FBgn0030581.1.mrna1;Target=FBgn0030581.1 561 632 +
Chr1	stalkie_big_nohaplotig	CDS	152690312	152690447	.	-	2	Parent=FBgn0030581.1.mrna1;Target=FBgn0030581.1 425 560 +
Chr1	stalkie_big_nohaplotig	CDS	152690508	152690661	.	-	0	Parent=FBgn0030581.1.mrna1;Target=FBgn0030581.1 271 424 +
Chr1	stalkie_big_nohaplotig	CDS	152690728	152690856	.	-	0	Parent=FBgn0030581.1.mrna1;Target=FBgn0030581.1 142 270 +
Chr1	stalkie_big_nohaplotig	CDS	152695596	152695658	.	-	0	Parent=FBgn0030581.1.mrna1;Target=FBgn0030581.1 79 141 +
Chr1	stalkie_big_nohaplotig	CDS	152696109	152696186	.	-	0	Parent=FBgn0030581.1.mrna1;Target=FBgn0030581.1 1 78 +
Chr1	gffcl	locus	152741001	152741899	.	-	.	ID=RLOC_00012595;geneIDs=comp155480_c0_seq1.path1;transcripts=comp155480_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152741001	152741899	.	-	.	ID=comp155480_c0_seq1.mrna1;geneID=comp155480_c0_seq1.path1;Name=comp155480_c0_seq1;Dir=indeterminatecoverage=98.9;identity=97.1;matches=875;mismatches=20;indels=6;unknowns=0;Target=comp155480_c0_seq1 897 1 .;CDS_Target=comp155480_c0_seq1 673 305 .;locus=RLOC_00012595
Chr1	stalkie_big_nohaplotig	exon	152741001	152741899	97	-	.	Parent=comp155480_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152741227	152741595	.	-	0	Parent=comp155480_c0_seq1.mrna1
Chr1	gffcl	locus	152745431	152745790	.	-	.	ID=RLOC_00012597;geneIDs=FBgn0040650.1.path1;transcripts=FBgn0040650.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152745431	152745790	.	-	.	ID=FBgn0040650.1.mrna1;geneID=FBgn0040650.1.path1;Name=FBgn0040650.1;Dir=sensecoverage=100.0;identity=99.7;matches=299;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012597
Chr1	stalkie_big_nohaplotig	exon	152745431	152745689	100	-	.	Parent=FBgn0040650.1.mrna1;Target=FBgn0040650.1 42 300 +
Chr1	stalkie_big_nohaplotig	exon	152745750	152745790	97	-	.	Parent=FBgn0040650.1.mrna1;Target=FBgn0040650.1 1 41 +
Chr1	stalkie_big_nohaplotig	CDS	152745431	152745689	.	-	1	Parent=FBgn0040650.1.mrna1;Target=FBgn0040650.1 42 300 +
Chr1	stalkie_big_nohaplotig	CDS	152745750	152745790	.	-	0	Parent=FBgn0040650.1.mrna1;Target=FBgn0040650.1 1 41 +
Chr1	gffcl	locus	152746675	152747445	.	+	.	ID=RLOC_00012598;geneIDs=FBgn0000077.1.path1;transcripts=FBgn0000077.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152746675	152747445	.	+	.	ID=FBgn0000077.1.mrna1;geneID=FBgn0000077.1.path1;Name=FBgn0000077.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=765;mismatches=6;indels=0;unknowns=0;Target=FBgn0000077.1 771 1 .;locus=RLOC_00012598
Chr1	stalkie_big_nohaplotig	exon	152746675	152747445	99	+	.	Parent=FBgn0000077.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152746675	152747445	.	+	0	Parent=FBgn0000077.1.mrna1
Chr1	gffcl	locus	152747590	152749368	.	-	.	ID=RLOC_00012599;geneIDs=FBgn0260771.1.path1;transcripts=FBgn0260771.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152747590	152749368	.	-	.	ID=FBgn0260771.1.mrna1;geneID=FBgn0260771.1.path1;Name=FBgn0260771.1;Dir=sensecoverage=100.0;identity=98.7;matches=1640;mismatches=22;indels=0;unknowns=0;locus=RLOC_00012599
Chr1	stalkie_big_nohaplotig	exon	152747590	152748428	98	-	.	Parent=FBgn0260771.1.mrna1;Target=FBgn0260771.1 824 1662 +
Chr1	stalkie_big_nohaplotig	exon	152748484	152749035	98	-	.	Parent=FBgn0260771.1.mrna1;Target=FBgn0260771.1 272 823 +
Chr1	stalkie_big_nohaplotig	exon	152749098	152749368	98	-	.	Parent=FBgn0260771.1.mrna1;Target=FBgn0260771.1 1 271 +
Chr1	stalkie_big_nohaplotig	CDS	152747590	152748428	.	-	2	Parent=FBgn0260771.1.mrna1;Target=FBgn0260771.1 824 1662 +
Chr1	stalkie_big_nohaplotig	CDS	152748484	152749035	.	-	2	Parent=FBgn0260771.1.mrna1;Target=FBgn0260771.1 272 823 +
Chr1	stalkie_big_nohaplotig	CDS	152749098	152749368	.	-	0	Parent=FBgn0260771.1.mrna1;Target=FBgn0260771.1 1 271 +
Chr1	gffcl	locus	152761314	152767743	.	+	.	ID=RLOC_00012601;geneIDs=FBgn0030362.2.path1,comp149025_c0_seq1.path1;transcripts=comp149025_c0_seq1.mrna1,FBgn0030362.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152761314	152766619	.	+	.	ID=comp149025_c0_seq1.mrna1;geneID=comp149025_c0_seq1.path1;Name=comp149025_c0_seq1;Dir=sensecoverage=100.0;identity=97.4;matches=572;mismatches=14;indels=1;unknowns=0;locus=RLOC_00012601
Chr1	stalkie_big_nohaplotig	exon	152761314	152761876	97	+	.	Parent=comp149025_c0_seq1.mrna1;Target=comp149025_c0_seq1 1 564 +
Chr1	stalkie_big_nohaplotig	exon	152766597	152766619	100	+	.	Parent=comp149025_c0_seq1.mrna1;Target=comp149025_c0_seq1 565 587 +
Chr1	stalkie_big_nohaplotig	CDS	152761775	152761876	.	+	0	Parent=comp149025_c0_seq1.mrna1;Target=comp149025_c0_seq1 463 564 +
Chr1	stalkie_big_nohaplotig	CDS	152766597	152766617	.	+	0	Parent=comp149025_c0_seq1.mrna1;Target=comp149025_c0_seq1 565 585 +
Chr1	stalkie_big_nohaplotig	mRNA	152766597	152767743	.	+	.	ID=FBgn0030362.2.mrna1;geneID=FBgn0030362.2.path1;Name=FBgn0030362.2;Dir=sensecoverage=96.5;identity=99.6;matches=911;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012601
Chr1	stalkie_big_nohaplotig	exon	152766597	152767182	99	+	.	Parent=FBgn0030362.2.mrna1;Target=FBgn0030362.2 34 619 +
Chr1	stalkie_big_nohaplotig	exon	152767243	152767381	100	+	.	Parent=FBgn0030362.2.mrna1;Target=FBgn0030362.2 620 758 +
Chr1	stalkie_big_nohaplotig	exon	152767554	152767743	100	+	.	Parent=FBgn0030362.2.mrna1;Target=FBgn0030362.2 759 948 +
Chr1	stalkie_big_nohaplotig	CDS	152766597	152767182	.	+	0	Parent=FBgn0030362.2.mrna1;Target=FBgn0030362.2 34 619 +
Chr1	stalkie_big_nohaplotig	CDS	152767243	152767381	.	+	2	Parent=FBgn0030362.2.mrna1;Target=FBgn0030362.2 620 758 +
Chr1	stalkie_big_nohaplotig	CDS	152767554	152767743	.	+	1	Parent=FBgn0030362.2.mrna1;Target=FBgn0030362.2 759 948 +
Chr1	gffcl	locus	152765665	152766526	.	-	.	ID=RLOC_00012602;geneIDs=comp152212_c0_seq1.path1;transcripts=comp152212_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152765665	152766526	.	-	.	ID=comp152212_c0_seq1.mrna1;geneID=comp152212_c0_seq1.path1;Name=comp152212_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.0;matches=833;mismatches=25;indels=10;unknowns=0;Target=comp152212_c0_seq1 864 1 .;CDS_Target=comp152212_c0_seq1 477 277 .;locus=RLOC_00012602
Chr1	stalkie_big_nohaplotig	exon	152765665	152766526	95	-	.	Parent=comp152212_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152766050	152766250	.	-	0	Parent=comp152212_c0_seq1.mrna1
Chr1	gffcl	locus	152769838	152771894	.	+	.	ID=RLOC_00012603;geneIDs=FBgn0030362.4.path1;transcripts=FBgn0030362.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152769838	152771894	.	+	.	ID=FBgn0030362.4.mrna1;geneID=FBgn0030362.4.path1;Name=FBgn0030362.4;Dir=sensecoverage=100.0;identity=99.9;matches=992;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012603
Chr1	stalkie_big_nohaplotig	exon	152769838	152769871	100	+	.	Parent=FBgn0030362.4.mrna1;Target=FBgn0030362.4 1 34 +
Chr1	stalkie_big_nohaplotig	exon	152769968	152770005	100	+	.	Parent=FBgn0030362.4.mrna1;Target=FBgn0030362.4 35 72 +
Chr1	stalkie_big_nohaplotig	exon	152770066	152770219	100	+	.	Parent=FBgn0030362.4.mrna1;Target=FBgn0030362.4 73 226 +
Chr1	stalkie_big_nohaplotig	exon	152770867	152771277	100	+	.	Parent=FBgn0030362.4.mrna1;Target=FBgn0030362.4 227 637 +
Chr1	stalkie_big_nohaplotig	exon	152771452	152771602	99	+	.	Parent=FBgn0030362.4.mrna1;Target=FBgn0030362.4 638 788 +
Chr1	stalkie_big_nohaplotig	exon	152771690	152771894	100	+	.	Parent=FBgn0030362.4.mrna1;Target=FBgn0030362.4 789 993 +
Chr1	stalkie_big_nohaplotig	CDS	152769838	152769871	.	+	0	Parent=FBgn0030362.4.mrna1;Target=FBgn0030362.4 1 34 +
Chr1	stalkie_big_nohaplotig	CDS	152769968	152770005	.	+	2	Parent=FBgn0030362.4.mrna1;Target=FBgn0030362.4 35 72 +
Chr1	stalkie_big_nohaplotig	CDS	152770066	152770219	.	+	0	Parent=FBgn0030362.4.mrna1;Target=FBgn0030362.4 73 226 +
Chr1	stalkie_big_nohaplotig	CDS	152770867	152771277	.	+	2	Parent=FBgn0030362.4.mrna1;Target=FBgn0030362.4 227 637 +
Chr1	stalkie_big_nohaplotig	CDS	152771452	152771602	.	+	2	Parent=FBgn0030362.4.mrna1;Target=FBgn0030362.4 638 788 +
Chr1	stalkie_big_nohaplotig	CDS	152771690	152771894	.	+	1	Parent=FBgn0030362.4.mrna1;Target=FBgn0030362.4 789 993 +
Chr1	gffcl	locus	152773334	152775612	.	+	.	ID=RLOC_00012604;geneIDs=FBgn0030362.3.path1,comp153205_c1_seq1.path1;transcripts=comp153205_c1_seq1.mrna1,FBgn0030362.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152773334	152775612	.	+	.	ID=comp153205_c1_seq1.mrna1;geneID=comp153205_c1_seq1.path1;Name=comp153205_c1_seq1;Dir=sensecoverage=100.0;identity=99.2;matches=918;mismatches=4;indels=3;unknowns=0;locus=RLOC_00012604
Chr1	stalkie_big_nohaplotig	exon	152773334	152773398	98	+	.	Parent=comp153205_c1_seq1.mrna1;Target=comp153205_c1_seq1 1 65 +
Chr1	stalkie_big_nohaplotig	exon	152773464	152773711	99	+	.	Parent=comp153205_c1_seq1.mrna1;Target=comp153205_c1_seq1 66 313 +
Chr1	stalkie_big_nohaplotig	exon	152774686	152775090	98	+	.	Parent=comp153205_c1_seq1.mrna1;Target=comp153205_c1_seq1 314 721 +
Chr1	stalkie_big_nohaplotig	exon	152775332	152775482	100	+	.	Parent=comp153205_c1_seq1.mrna1;Target=comp153205_c1_seq1 722 872 +
Chr1	stalkie_big_nohaplotig	exon	152775560	152775612	100	+	.	Parent=comp153205_c1_seq1.mrna1;Target=comp153205_c1_seq1 873 925 +
Chr1	stalkie_big_nohaplotig	CDS	152773552	152773711	.	+	0	Parent=comp153205_c1_seq1.mrna1;Target=comp153205_c1_seq1 154 313 +
Chr1	stalkie_big_nohaplotig	CDS	152774686	152775090	.	+	2	Parent=comp153205_c1_seq1.mrna1;Target=comp153205_c1_seq1 314 721 +
Chr1	stalkie_big_nohaplotig	CDS	152775332	152775482	.	+	2	Parent=comp153205_c1_seq1.mrna1;Target=comp153205_c1_seq1 722 872 +
Chr1	stalkie_big_nohaplotig	CDS	152775560	152775611	.	+	1	Parent=comp153205_c1_seq1.mrna1;Target=comp153205_c1_seq1 873 924 +
Chr1	stalkie_big_nohaplotig	mRNA	152773350	152775611	.	+	.	ID=FBgn0030362.3.mrna1;geneID=FBgn0030362.3.path1;Name=FBgn0030362.3;Dir=sensecoverage=100.0;identity=99.4;matches=847;mismatches=2;indels=3;unknowns=0;locus=RLOC_00012604
Chr1	stalkie_big_nohaplotig	exon	152773350	152773398	100	+	.	Parent=FBgn0030362.3.mrna1;Target=FBgn0030362.3 1 49 +
Chr1	stalkie_big_nohaplotig	exon	152773464	152773501	100	+	.	Parent=FBgn0030362.3.mrna1;Target=FBgn0030362.3 50 87 +
Chr1	stalkie_big_nohaplotig	exon	152773558	152773711	100	+	.	Parent=FBgn0030362.3.mrna1;Target=FBgn0030362.3 88 241 +
Chr1	stalkie_big_nohaplotig	exon	152774686	152775090	98	+	.	Parent=FBgn0030362.3.mrna1;Target=FBgn0030362.3 242 649 +
Chr1	stalkie_big_nohaplotig	exon	152775332	152775482	100	+	.	Parent=FBgn0030362.3.mrna1;Target=FBgn0030362.3 650 800 +
Chr1	stalkie_big_nohaplotig	exon	152775560	152775611	100	+	.	Parent=FBgn0030362.3.mrna1;Target=FBgn0030362.3 801 852 +
Chr1	stalkie_big_nohaplotig	CDS	152773350	152773398	.	+	0	Parent=FBgn0030362.3.mrna1;Target=FBgn0030362.3 1 49 +
Chr1	stalkie_big_nohaplotig	CDS	152773464	152773501	.	+	2	Parent=FBgn0030362.3.mrna1;Target=FBgn0030362.3 50 87 +
Chr1	stalkie_big_nohaplotig	CDS	152773558	152773711	.	+	0	Parent=FBgn0030362.3.mrna1;Target=FBgn0030362.3 88 241 +
Chr1	stalkie_big_nohaplotig	CDS	152774686	152775090	.	+	2	Parent=FBgn0030362.3.mrna1;Target=FBgn0030362.3 242 649 +
Chr1	stalkie_big_nohaplotig	CDS	152775332	152775482	.	+	2	Parent=FBgn0030362.3.mrna1;Target=FBgn0030362.3 650 800 +
Chr1	stalkie_big_nohaplotig	CDS	152775560	152775611	.	+	1	Parent=FBgn0030362.3.mrna1;Target=FBgn0030362.3 801 852 +
Chr1	gffcl	locus	152778357	152779742	.	+	.	ID=RLOC_00012605;geneIDs=FBgn0038257.1.path1;transcripts=FBgn0038257.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152778357	152779742	.	+	.	ID=FBgn0038257.1.mrna1;geneID=FBgn0038257.1.path1;Name=FBgn0038257.1;Dir=sensecoverage=99.9;identity=98.0;matches=896;mismatches=18;indels=0;unknowns=0;locus=RLOC_00012605
Chr1	stalkie_big_nohaplotig	exon	152778357	152778506	98	+	.	Parent=FBgn0038257.1.mrna1;Target=FBgn0038257.1 2 151 +
Chr1	stalkie_big_nohaplotig	exon	152778756	152779163	97	+	.	Parent=FBgn0038257.1.mrna1;Target=FBgn0038257.1 152 559 +
Chr1	stalkie_big_nohaplotig	exon	152779309	152779459	99	+	.	Parent=FBgn0038257.1.mrna1;Target=FBgn0038257.1 560 710 +
Chr1	stalkie_big_nohaplotig	exon	152779538	152779742	97	+	.	Parent=FBgn0038257.1.mrna1;Target=FBgn0038257.1 711 915 +
Chr1	stalkie_big_nohaplotig	CDS	152778359	152778506	.	+	0	Parent=FBgn0038257.1.mrna1;Target=FBgn0038257.1 4 151 +
Chr1	stalkie_big_nohaplotig	CDS	152778756	152779163	.	+	2	Parent=FBgn0038257.1.mrna1;Target=FBgn0038257.1 152 559 +
Chr1	stalkie_big_nohaplotig	CDS	152779309	152779459	.	+	2	Parent=FBgn0038257.1.mrna1;Target=FBgn0038257.1 560 710 +
Chr1	stalkie_big_nohaplotig	CDS	152779538	152779742	.	+	1	Parent=FBgn0038257.1.mrna1;Target=FBgn0038257.1 711 915 +
Chr1	stalkie_big_nohaplotig	mRNA	152779125	152821599	.	-	.	ID=comp163216_c2_seq1.mrna1;geneID=comp163216_c2_seq1.path1;Name=comp163216_c2_seq1;Dir=antisensecoverage=87.7;identity=87.9;matches=2643;mismatches=199;indels=165;unknowns=0;Target=comp163216_c2_seq1 1923 2123 .;locus=RLOC_00012606
Chr1	stalkie_big_nohaplotig	exon	152779125	152779132	100	-	.	Parent=comp163216_c2_seq1.mrna1;Target=comp163216_c2_seq1 409 416 -
Chr1	stalkie_big_nohaplotig	exon	152779888	152779900	100	-	.	Parent=comp163216_c2_seq1.mrna1;Target=comp163216_c2_seq1 417 429 -
Chr1	stalkie_big_nohaplotig	exon	152784744	152784747	75	-	.	Parent=comp163216_c2_seq1.mrna1;Target=comp163216_c2_seq1 468 470 -
Chr1	stalkie_big_nohaplotig	exon	152798428	152798453	41	-	.	Parent=comp163216_c2_seq1.mrna1;Target=comp163216_c2_seq1 471 522 -
Chr1	stalkie_big_nohaplotig	exon	152800305	152800309	100	-	.	Parent=comp163216_c2_seq1.mrna1;Target=comp163216_c2_seq1 523 527 -
Chr1	stalkie_big_nohaplotig	exon	152800866	152800874	100	-	.	Parent=comp163216_c2_seq1.mrna1;Target=comp163216_c2_seq1 528 536 -
Chr1	stalkie_big_nohaplotig	exon	152802271	152802286	68	-	.	Parent=comp163216_c2_seq1.mrna1;Target=comp163216_c2_seq1 537 548 -
Chr1	stalkie_big_nohaplotig	exon	152804348	152804421	54	-	.	Parent=comp163216_c2_seq1.mrna1;Target=comp163216_c2_seq1 589 667 -
Chr1	stalkie_big_nohaplotig	exon	152805060	152805065	100	-	.	Parent=comp163216_c2_seq1.mrna1;Target=comp163216_c2_seq1 668 673 -
Chr1	stalkie_big_nohaplotig	exon	152805268	152805285	39	-	.	Parent=comp163216_c2_seq1.mrna1;Target=comp163216_c2_seq1 674 719 -
Chr1	stalkie_big_nohaplotig	exon	152808932	152808952	57	-	.	Parent=comp163216_c2_seq1.mrna1;Target=comp163216_c2_seq1 721 735 -
Chr1	stalkie_big_nohaplotig	exon	152810366	152810404	66	-	.	Parent=comp163216_c2_seq1.mrna1;Target=comp163216_c2_seq1 736 768 -
Chr1	stalkie_big_nohaplotig	exon	152812901	152812936	59	-	.	Parent=comp163216_c2_seq1.mrna1;Target=comp163216_c2_seq1 771 818 -
Chr1	stalkie_big_nohaplotig	exon	152813344	152813354	100	-	.	Parent=comp163216_c2_seq1.mrna1;Target=comp163216_c2_seq1 831 841 -
Chr1	stalkie_big_nohaplotig	exon	152813404	152813408	100	-	.	Parent=comp163216_c2_seq1.mrna1;Target=comp163216_c2_seq1 845 849 -
Chr1	stalkie_big_nohaplotig	exon	152813558	152813567	100	-	.	Parent=comp163216_c2_seq1.mrna1;Target=comp163216_c2_seq1 850 859 -
Chr1	stalkie_big_nohaplotig	exon	152817279	152817298	64	-	.	Parent=comp163216_c2_seq1.mrna1;Target=comp163216_c2_seq1 867 891 -
Chr1	stalkie_big_nohaplotig	exon	152817836	152817845	100	-	.	Parent=comp163216_c2_seq1.mrna1;Target=comp163216_c2_seq1 892 901 -
Chr1	stalkie_big_nohaplotig	exon	152819041	152819830	81	-	.	Parent=comp163216_c2_seq1.mrna1;Target=comp163216_c2_seq1 902 1698 -
Chr1	stalkie_big_nohaplotig	exon	152819841	152821599	96	-	.	Parent=comp163216_c2_seq1.mrna1;Target=comp163216_c2_seq1 1699 3478 -
Chr1	stalkie_big_nohaplotig	CDS	152820065	152820265	.	-	0	Parent=comp163216_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152798304	152799001	.	-	.	ID=FBgn0036072.1.mrna1;geneID=FBgn0036072.1.path1;Name=FBgn0036072.1;Dir=sensecoverage=100.0;identity=98.9;matches=552;mismatches=5;indels=1;unknowns=0;locus=RLOC_00012606
Chr1	stalkie_big_nohaplotig	exon	152798304	152798333	100	-	.	Parent=FBgn0036072.1.mrna1;Target=FBgn0036072.1 529 558 +
Chr1	stalkie_big_nohaplotig	exon	152798419	152798819	99	-	.	Parent=FBgn0036072.1.mrna1;Target=FBgn0036072.1 127 528 +
Chr1	stalkie_big_nohaplotig	exon	152798876	152799001	96	-	.	Parent=FBgn0036072.1.mrna1;Target=FBgn0036072.1 1 126 +
Chr1	stalkie_big_nohaplotig	CDS	152798304	152798333	.	-	1	Parent=FBgn0036072.1.mrna1;Target=FBgn0036072.1 529 558 +
Chr1	stalkie_big_nohaplotig	CDS	152798419	152798819	.	-	0	Parent=FBgn0036072.1.mrna1;Target=FBgn0036072.1 127 528 +
Chr1	stalkie_big_nohaplotig	CDS	152798876	152799001	.	-	0	Parent=FBgn0036072.1.mrna1;Target=FBgn0036072.1 1 126 +
Chr1	stalkie_big_nohaplotig	mRNA	152802136	152803102	.	-	.	ID=FBgn0020508.3.mrna1;geneID=FBgn0020508.3.path1;Name=FBgn0020508.3;Dir=sensecoverage=100.0;identity=99.5;matches=794;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012606
Chr1	stalkie_big_nohaplotig	exon	152802136	152802370	99	-	.	Parent=FBgn0020508.3.mrna1;Target=FBgn0020508.3 564 798 +
Chr1	stalkie_big_nohaplotig	exon	152802449	152802849	99	-	.	Parent=FBgn0020508.3.mrna1;Target=FBgn0020508.3 163 563 +
Chr1	stalkie_big_nohaplotig	exon	152802941	152803102	100	-	.	Parent=FBgn0020508.3.mrna1;Target=FBgn0020508.3 1 162 +
Chr1	stalkie_big_nohaplotig	CDS	152802136	152802370	.	-	1	Parent=FBgn0020508.3.mrna1;Target=FBgn0020508.3 564 798 +
Chr1	stalkie_big_nohaplotig	CDS	152802449	152802849	.	-	0	Parent=FBgn0020508.3.mrna1;Target=FBgn0020508.3 163 563 +
Chr1	stalkie_big_nohaplotig	CDS	152802941	152803102	.	-	0	Parent=FBgn0020508.3.mrna1;Target=FBgn0020508.3 1 162 +
Chr1	stalkie_big_nohaplotig	mRNA	152818752	152819079	.	-	.	ID=comp135020_c0_seq1.mrna1;geneID=comp135020_c0_seq1.path1;Name=comp135020_c0_seq1;Dir=indeterminatecoverage=99.4;identity=100.0;matches=328;mismatches=0;indels=0;unknowns=0;Target=comp135020_c0_seq1 328 1 .;CDS_Target=comp135020_c0_seq1 70 2 .;locus=RLOC_00012606
Chr1	stalkie_big_nohaplotig	exon	152818752	152819079	100	-	.	Parent=comp135020_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152819010	152819078	.	-	0	Parent=comp135020_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152821593	152925992	.	-	.	ID=comp161984_c1_seq1.mrna1;geneID=comp161984_c1_seq1.path1;Name=comp161984_c1_seq1;Dir=antisensecoverage=95.1;identity=94.6;matches=3408;mismatches=84;indels=111;unknowns=0;locus=RLOC_00012606
Chr1	stalkie_big_nohaplotig	exon	152821593	152822499	98	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 19 914 -
Chr1	stalkie_big_nohaplotig	exon	152822567	152823312	99	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 915 1660 -
Chr1	stalkie_big_nohaplotig	exon	152823484	152824922	99	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 1661 3096 -
Chr1	stalkie_big_nohaplotig	exon	152828955	152828966	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 3097 3108 -
Chr1	stalkie_big_nohaplotig	exon	152829989	152829999	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 4922 4932 -
Chr1	stalkie_big_nohaplotig	exon	152830426	152830433	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5175 5182 -
Chr1	stalkie_big_nohaplotig	exon	152831259	152831266	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5203 5210 -
Chr1	stalkie_big_nohaplotig	exon	152831529	152831536	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5225 5232 -
Chr1	stalkie_big_nohaplotig	exon	152832562	152832564	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5233 5235 -
Chr1	stalkie_big_nohaplotig	exon	152832615	152832725	49	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5315 5473 -
Chr1	stalkie_big_nohaplotig	exon	152832961	152832966	35	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5505 5518 -
Chr1	stalkie_big_nohaplotig	exon	152836229	152836236	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5519 5526 -
Chr1	stalkie_big_nohaplotig	exon	152836415	152836454	42	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5527 5543 -
Chr1	stalkie_big_nohaplotig	exon	152850818	152850824	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5544 5550 -
Chr1	stalkie_big_nohaplotig	exon	152853673	152853680	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5551 5558 -
Chr1	stalkie_big_nohaplotig	exon	152854433	152854440	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5559 5566 -
Chr1	stalkie_big_nohaplotig	exon	152854561	152854564	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5567 5570 -
Chr1	stalkie_big_nohaplotig	exon	152859185	152859200	81	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5571 5586 -
Chr1	stalkie_big_nohaplotig	exon	152861925	152861938	78	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5587 5600 -
Chr1	stalkie_big_nohaplotig	exon	152867481	152867484	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5601 5604 -
Chr1	stalkie_big_nohaplotig	exon	152868680	152868691	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5605 5616 -
Chr1	stalkie_big_nohaplotig	exon	152872883	152872895	84	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5617 5629 -
Chr1	stalkie_big_nohaplotig	exon	152874263	152874272	90	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5630 5639 -
Chr1	stalkie_big_nohaplotig	exon	152874301	152874308	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5692 5699 -
Chr1	stalkie_big_nohaplotig	exon	152882565	152882617	47	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5700 5744 -
Chr1	stalkie_big_nohaplotig	exon	152898018	152898021	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5745 5748 -
Chr1	stalkie_big_nohaplotig	exon	152903248	152903257	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5749 5758 -
Chr1	stalkie_big_nohaplotig	exon	152905674	152905676	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5759 5761 -
Chr1	stalkie_big_nohaplotig	exon	152907125	152907126	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5762 5763 -
Chr1	stalkie_big_nohaplotig	exon	152910684	152910685	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5764 5765 -
Chr1	stalkie_big_nohaplotig	exon	152916363	152916366	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5766 5769 -
Chr1	stalkie_big_nohaplotig	exon	152917003	152917010	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5770 5777 -
Chr1	stalkie_big_nohaplotig	exon	152922685	152922693	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5778 5786 -
Chr1	stalkie_big_nohaplotig	exon	152924170	152924199	53	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5787 5808 -
Chr1	stalkie_big_nohaplotig	exon	152925985	152925992	100	-	.	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 5811 5818 -
Chr1	stalkie_big_nohaplotig	CDS	152822207	152822499	.	-	2	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 622 914 .
Chr1	stalkie_big_nohaplotig	CDS	152822567	152823312	.	-	1	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 915 1660 .
Chr1	stalkie_big_nohaplotig	CDS	152823484	152824598	.	-	0	Parent=comp161984_c1_seq1.mrna1;Target=comp161984_c1_seq1 1661 2775 .
Chr1	stalkie_big_nohaplotig	mRNA	152831530	152832747	.	-	.	ID=comp159814_c0_seq1.mrna1;geneID=comp159814_c0_seq1.path1;Name=comp159814_c0_seq1;Dir=indeterminatecoverage=98.9;identity=93.5;matches=1198;mismatches=20;indels=63;unknowns=0;Target=comp159814_c0_seq1 1295 15 .;CDS_Target=comp159814_c0_seq1 531 490 .;locus=RLOC_00012606
Chr1	stalkie_big_nohaplotig	exon	152831530	152832747	93	-	.	Parent=comp159814_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152832294	152832328	.	-	0	Parent=comp159814_c0_seq1.mrna1
Chr1	gffcl	locus	152781011	152782922	.	+	.	ID=RLOC_00012607;geneIDs=FBgn0030362.1.path1;transcripts=FBgn0030362.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152781011	152782922	.	+	.	ID=FBgn0030362.1.mrna1;geneID=FBgn0030362.1.path1;Name=FBgn0030362.1;Dir=sensecoverage=100.0;identity=99.6;matches=1031;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012607
Chr1	stalkie_big_nohaplotig	exon	152781011	152781059	100	+	.	Parent=FBgn0030362.1.mrna1;Target=FBgn0030362.1 1 49 +
Chr1	stalkie_big_nohaplotig	exon	152781162	152781202	97	+	.	Parent=FBgn0030362.1.mrna1;Target=FBgn0030362.1 50 90 +
Chr1	stalkie_big_nohaplotig	exon	152781273	152781459	100	+	.	Parent=FBgn0030362.1.mrna1;Target=FBgn0030362.1 91 277 +
Chr1	stalkie_big_nohaplotig	exon	152781620	152782027	99	+	.	Parent=FBgn0030362.1.mrna1;Target=FBgn0030362.1 278 685 +
Chr1	stalkie_big_nohaplotig	exon	152782285	152782435	99	+	.	Parent=FBgn0030362.1.mrna1;Target=FBgn0030362.1 686 836 +
Chr1	stalkie_big_nohaplotig	exon	152782724	152782922	100	+	.	Parent=FBgn0030362.1.mrna1;Target=FBgn0030362.1 837 1035 +
Chr1	stalkie_big_nohaplotig	CDS	152781011	152781059	.	+	0	Parent=FBgn0030362.1.mrna1;Target=FBgn0030362.1 1 49 +
Chr1	stalkie_big_nohaplotig	CDS	152781162	152781202	.	+	2	Parent=FBgn0030362.1.mrna1;Target=FBgn0030362.1 50 90 +
Chr1	stalkie_big_nohaplotig	CDS	152781273	152781459	.	+	0	Parent=FBgn0030362.1.mrna1;Target=FBgn0030362.1 91 277 +
Chr1	stalkie_big_nohaplotig	CDS	152781620	152782027	.	+	2	Parent=FBgn0030362.1.mrna1;Target=FBgn0030362.1 278 685 +
Chr1	stalkie_big_nohaplotig	CDS	152782285	152782435	.	+	2	Parent=FBgn0030362.1.mrna1;Target=FBgn0030362.1 686 836 +
Chr1	stalkie_big_nohaplotig	CDS	152782724	152782922	.	+	1	Parent=FBgn0030362.1.mrna1;Target=FBgn0030362.1 837 1035 +
Chr1	gffcl	locus	152789846	152790798	.	-	.	ID=RLOC_00012608;geneIDs=comp134832_c0_seq1.path1,comp144737_c0_seq1.path1;transcripts=comp134832_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152790192	152790798	.	-	.	ID=comp134832_c0_seq1.mrna1;geneID=comp134832_c0_seq1.path1;Name=comp134832_c0_seq1;Dir=antisensecoverage=99.8;identity=97.8;matches=485;mismatches=10;indels=1;unknowns=0;locus=RLOC_00012608
Chr1	stalkie_big_nohaplotig	exon	152790192	152790316	100	-	.	Parent=comp134832_c0_seq1.mrna1;Target=comp134832_c0_seq1 2 126 -
Chr1	stalkie_big_nohaplotig	exon	152790374	152790458	100	-	.	Parent=comp134832_c0_seq1.mrna1;Target=comp134832_c0_seq1 127 211 -
Chr1	stalkie_big_nohaplotig	exon	152790513	152790798	96	-	.	Parent=comp134832_c0_seq1.mrna1;Target=comp134832_c0_seq1 212 496 -
Chr1	stalkie_big_nohaplotig	CDS	152790193	152790316	.	-	1	Parent=comp134832_c0_seq1.mrna1;Target=comp134832_c0_seq1 3 126 .
Chr1	stalkie_big_nohaplotig	CDS	152790374	152790458	.	-	2	Parent=comp134832_c0_seq1.mrna1;Target=comp134832_c0_seq1 127 211 .
Chr1	stalkie_big_nohaplotig	CDS	152790513	152790531	.	-	0	Parent=comp134832_c0_seq1.mrna1;Target=comp134832_c0_seq1 212 230 .
Chr1	gffcl	locus	152791395	152791881	.	-	.	ID=RLOC_00012609;geneIDs=comp152306_c1_seq1.path2;transcripts=comp152306_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	152791395	152791881	.	-	.	ID=comp152306_c1_seq1.mrna2;geneID=comp152306_c1_seq1.path2;Name=comp152306_c1_seq1;Dir=indeterminatecoverage=70.0;identity=98.4;matches=479;mismatches=8;indels=0;unknowns=0;Target=comp152306_c1_seq1 678 192 .;CDS_Target=comp152306_c1_seq1 327 192 .;locus=RLOC_00012609
Chr1	stalkie_big_nohaplotig	exon	152791395	152791881	98	-	.	Parent=comp152306_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	152791746	152791881	.	-	2	Parent=comp152306_c1_seq1.mrna2
Chr1	gffcl	locus	152794749	152795675	.	-	.	ID=RLOC_00012610;geneIDs=FBgn0015010.1.path1;transcripts=FBgn0015010.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152794749	152795675	.	-	.	ID=FBgn0015010.1.mrna1;geneID=FBgn0015010.1.path1;Name=FBgn0015010.1;Dir=sensecoverage=100.0;identity=98.8;matches=765;mismatches=9;indels=0;unknowns=0;locus=RLOC_00012610
Chr1	stalkie_big_nohaplotig	exon	152794749	152794998	98	-	.	Parent=FBgn0015010.1.mrna1;Target=FBgn0015010.1 525 774 +
Chr1	stalkie_big_nohaplotig	exon	152795068	152795465	98	-	.	Parent=FBgn0015010.1.mrna1;Target=FBgn0015010.1 127 524 +
Chr1	stalkie_big_nohaplotig	exon	152795550	152795675	100	-	.	Parent=FBgn0015010.1.mrna1;Target=FBgn0015010.1 1 126 +
Chr1	stalkie_big_nohaplotig	CDS	152794749	152794998	.	-	1	Parent=FBgn0015010.1.mrna1;Target=FBgn0015010.1 525 774 +
Chr1	stalkie_big_nohaplotig	CDS	152795068	152795465	.	-	0	Parent=FBgn0015010.1.mrna1;Target=FBgn0015010.1 127 524 +
Chr1	stalkie_big_nohaplotig	CDS	152795550	152795675	.	-	0	Parent=FBgn0015010.1.mrna1;Target=FBgn0015010.1 1 126 +
Chr1	gffcl	locus	152796714	152797142	.	+	.	ID=RLOC_00012611;geneIDs=comp115052_c0_seq1.path1;transcripts=comp115052_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152796714	152797142	.	+	.	ID=comp115052_c0_seq1.mrna1;geneID=comp115052_c0_seq1.path1;Name=comp115052_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=427;mismatches=2;indels=0;unknowns=0;Target=comp115052_c0_seq1 429 1 .;CDS_Target=comp115052_c0_seq1 196 2 .;locus=RLOC_00012611
Chr1	stalkie_big_nohaplotig	exon	152796714	152797142	99	+	.	Parent=comp115052_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152796715	152796909	.	+	0	Parent=comp115052_c0_seq1.mrna1
Chr1	gffcl	locus	152809465	152809879	.	-	.	ID=RLOC_00012612;geneIDs=comp144942_c0_seq1.path1;transcripts=comp144942_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152809465	152809879	.	-	.	ID=comp144942_c0_seq1.mrna1;geneID=comp144942_c0_seq1.path1;Name=comp144942_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=326;mismatches=1;indels=1;unknowns=0;locus=RLOC_00012612
Chr1	stalkie_big_nohaplotig	exon	152809465	152809626	98	-	.	Parent=comp144942_c0_seq1.mrna1;Target=comp144942_c0_seq1 1 163 -
Chr1	stalkie_big_nohaplotig	exon	152809715	152809879	100	-	.	Parent=comp144942_c0_seq1.mrna1;Target=comp144942_c0_seq1 164 328 -
Chr1	stalkie_big_nohaplotig	CDS	152809616	152809626	.	-	0	Parent=comp144942_c0_seq1.mrna1;Target=comp144942_c0_seq1 152 163 .
Chr1	stalkie_big_nohaplotig	CDS	152809715	152809834	.	-	0	Parent=comp144942_c0_seq1.mrna1;Target=comp144942_c0_seq1 164 283 .
Chr1	gffcl	locus	152815484	152816368	.	+	.	ID=RLOC_00012613;geneIDs=FBgn0037889.2.path1;transcripts=FBgn0037889.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152815484	152816368	.	+	.	ID=FBgn0037889.2.mrna1;geneID=FBgn0037889.2.path1;Name=FBgn0037889.2;Dir=sensecoverage=100.0;identity=99.6;matches=759;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012613
Chr1	stalkie_big_nohaplotig	exon	152815484	152815606	100	+	.	Parent=FBgn0037889.2.mrna1;Target=FBgn0037889.2 1 123 +
Chr1	stalkie_big_nohaplotig	exon	152815671	152816068	99	+	.	Parent=FBgn0037889.2.mrna1;Target=FBgn0037889.2 124 521 +
Chr1	stalkie_big_nohaplotig	exon	152816128	152816368	99	+	.	Parent=FBgn0037889.2.mrna1;Target=FBgn0037889.2 522 762 +
Chr1	stalkie_big_nohaplotig	CDS	152815484	152815606	.	+	0	Parent=FBgn0037889.2.mrna1;Target=FBgn0037889.2 1 123 +
Chr1	stalkie_big_nohaplotig	CDS	152815671	152816068	.	+	0	Parent=FBgn0037889.2.mrna1;Target=FBgn0037889.2 124 521 +
Chr1	stalkie_big_nohaplotig	CDS	152816128	152816368	.	+	1	Parent=FBgn0037889.2.mrna1;Target=FBgn0037889.2 522 762 +
Chr1	gffcl	locus	152818299	152818691	.	-	.	ID=RLOC_00012614;geneIDs=comp121807_c0_seq1.path1;transcripts=comp121807_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152818299	152818691	.	-	.	ID=comp121807_c0_seq1.mrna1;geneID=comp121807_c0_seq1.path1;Name=comp121807_c0_seq1;Dir=indeterminatecoverage=96.1;identity=99.7;matches=392;mismatches=1;indels=0;unknowns=0;Target=comp121807_c0_seq1 395 3 .;CDS_Target=comp121807_c0_seq1 298 212 .;locus=RLOC_00012614
Chr1	stalkie_big_nohaplotig	exon	152818299	152818691	99	-	.	Parent=comp121807_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152818396	152818482	.	-	0	Parent=comp121807_c0_seq1.mrna1
Chr1	gffcl	locus	152833499	152834557	.	-	.	ID=RLOC_00012615;geneIDs=comp158648_c0_seq1.path1;transcripts=comp158648_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152833499	152834557	.	-	.	ID=comp158648_c0_seq1.mrna1;geneID=comp158648_c0_seq1.path1;Name=comp158648_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=1034;mismatches=24;indels=3;unknowns=0;Target=comp158648_c0_seq1 1060 1 .;CDS_Target=comp158648_c0_seq1 93 1 .;locus=RLOC_00012615
Chr1	stalkie_big_nohaplotig	exon	152833499	152834557	97	-	.	Parent=comp158648_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152834467	152834557	.	-	0	Parent=comp158648_c0_seq1.mrna1
Chr1	gffcl	locus	152845639	152846074	.	+	.	ID=RLOC_00012616;geneIDs=comp68245_c0_seq1.path1;transcripts=comp68245_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152845639	152846074	.	+	.	ID=comp68245_c0_seq1.mrna1;geneID=comp68245_c0_seq1.path1;Name=comp68245_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=362;mismatches=1;indels=0;unknowns=0;Target=comp68245_c0_seq1 243 362 .;locus=RLOC_00012616
Chr1	stalkie_big_nohaplotig	exon	152845639	152845823	99	+	.	Parent=comp68245_c0_seq1.mrna1;Target=comp68245_c0_seq1 179 363 -
Chr1	stalkie_big_nohaplotig	exon	152845897	152846074	100	+	.	Parent=comp68245_c0_seq1.mrna1;Target=comp68245_c0_seq1 1 178 -
Chr1	stalkie_big_nohaplotig	CDS	152845640	152845759	.	+	0	Parent=comp68245_c0_seq1.mrna1
Chr1	gffcl	locus	152898154	152898870	.	-	.	ID=RLOC_00012617;geneIDs=comp159397_c0_seq1.path1;transcripts=comp159397_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152898154	152898870	.	-	.	ID=comp159397_c0_seq1.mrna1;geneID=comp159397_c0_seq1.path1;Name=comp159397_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=706;mismatches=11;indels=13;unknowns=0;Target=comp159397_c0_seq1 730 1 .;CDS_Target=comp159397_c0_seq1 545 468 .;locus=RLOC_00012617
Chr1	stalkie_big_nohaplotig	exon	152898154	152898870	96	-	.	Parent=comp159397_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152898339	152898411	.	-	0	Parent=comp159397_c0_seq1.mrna1
Chr1	gffcl	locus	152899868	152900118	.	+	.	ID=RLOC_00012618;geneIDs=comp116256_c0_seq1.path1;transcripts=comp116256_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152899868	152900118	.	+	.	ID=comp116256_c0_seq1.mrna1;geneID=comp116256_c0_seq1.path1;Name=comp116256_c0_seq1;Dir=indeterminatecoverage=95.4;identity=98.4;matches=247;mismatches=4;indels=0;unknowns=0;Target=comp116256_c0_seq1 252 2 .;CDS_Target=comp116256_c0_seq1 82 2 .;locus=RLOC_00012618
Chr1	stalkie_big_nohaplotig	exon	152899868	152900118	98	+	.	Parent=comp116256_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	152899868	152899948	.	+	0	Parent=comp116256_c0_seq1.mrna1
Chr1	gffcl	locus	152900678	152916289	.	-	.	ID=RLOC_00012619;geneIDs=FBgn0036260.1.path1;transcripts=FBgn0036260.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152900678	152916289	.	-	.	ID=FBgn0036260.1.mrna1;geneID=FBgn0036260.1.path1;Name=FBgn0036260.1;Dir=sensecoverage=100.0;identity=99.8;matches=1551;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012619
Chr1	stalkie_big_nohaplotig	exon	152900678	152901552	99	-	.	Parent=FBgn0036260.1.mrna1;Target=FBgn0036260.1 680 1554 +
Chr1	stalkie_big_nohaplotig	exon	152902977	152903107	100	-	.	Parent=FBgn0036260.1.mrna1;Target=FBgn0036260.1 549 679 +
Chr1	stalkie_big_nohaplotig	exon	152903984	152904169	100	-	.	Parent=FBgn0036260.1.mrna1;Target=FBgn0036260.1 363 548 +
Chr1	stalkie_big_nohaplotig	exon	152915928	152916289	99	-	.	Parent=FBgn0036260.1.mrna1;Target=FBgn0036260.1 1 362 +
Chr1	stalkie_big_nohaplotig	CDS	152900678	152901552	.	-	2	Parent=FBgn0036260.1.mrna1;Target=FBgn0036260.1 680 1554 +
Chr1	stalkie_big_nohaplotig	CDS	152902977	152903107	.	-	1	Parent=FBgn0036260.1.mrna1;Target=FBgn0036260.1 549 679 +
Chr1	stalkie_big_nohaplotig	CDS	152903984	152904169	.	-	1	Parent=FBgn0036260.1.mrna1;Target=FBgn0036260.1 363 548 +
Chr1	stalkie_big_nohaplotig	CDS	152915928	152916289	.	-	0	Parent=FBgn0036260.1.mrna1;Target=FBgn0036260.1 1 362 +
Chr1	gffcl	locus	152927868	152929749	.	+	.	ID=RLOC_00012620;geneIDs=FBgn0031115.1.path1;transcripts=FBgn0031115.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152927868	152929749	.	+	.	ID=FBgn0031115.1.mrna1;geneID=FBgn0031115.1.path1;Name=FBgn0031115.1;Dir=sensecoverage=100.0;identity=99.0;matches=1557;mismatches=15;indels=0;unknowns=0;locus=RLOC_00012620
Chr1	stalkie_big_nohaplotig	exon	152927868	152928066	98	+	.	Parent=FBgn0031115.1.mrna1;Target=FBgn0031115.1 1 199 +
Chr1	stalkie_big_nohaplotig	exon	152928135	152928643	98	+	.	Parent=FBgn0031115.1.mrna1;Target=FBgn0031115.1 200 708 +
Chr1	stalkie_big_nohaplotig	exon	152928706	152929178	99	+	.	Parent=FBgn0031115.1.mrna1;Target=FBgn0031115.1 709 1181 +
Chr1	stalkie_big_nohaplotig	exon	152929251	152929372	100	+	.	Parent=FBgn0031115.1.mrna1;Target=FBgn0031115.1 1182 1303 +
Chr1	stalkie_big_nohaplotig	exon	152929427	152929621	99	+	.	Parent=FBgn0031115.1.mrna1;Target=FBgn0031115.1 1304 1498 +
Chr1	stalkie_big_nohaplotig	exon	152929676	152929749	98	+	.	Parent=FBgn0031115.1.mrna1;Target=FBgn0031115.1 1499 1572 +
Chr1	stalkie_big_nohaplotig	CDS	152927868	152928066	.	+	0	Parent=FBgn0031115.1.mrna1;Target=FBgn0031115.1 1 199 +
Chr1	stalkie_big_nohaplotig	CDS	152928135	152928643	.	+	2	Parent=FBgn0031115.1.mrna1;Target=FBgn0031115.1 200 708 +
Chr1	stalkie_big_nohaplotig	CDS	152928706	152929178	.	+	0	Parent=FBgn0031115.1.mrna1;Target=FBgn0031115.1 709 1181 +
Chr1	stalkie_big_nohaplotig	CDS	152929251	152929372	.	+	1	Parent=FBgn0031115.1.mrna1;Target=FBgn0031115.1 1182 1303 +
Chr1	stalkie_big_nohaplotig	CDS	152929427	152929621	.	+	2	Parent=FBgn0031115.1.mrna1;Target=FBgn0031115.1 1304 1498 +
Chr1	stalkie_big_nohaplotig	CDS	152929676	152929749	.	+	2	Parent=FBgn0031115.1.mrna1;Target=FBgn0031115.1 1499 1572 +
Chr1	gffcl	locus	152970180	153044657	.	+	.	ID=RLOC_00012621;geneIDs=FBgn0259170.1.path1;transcripts=FBgn0259170.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	152970180	153044657	.	+	.	ID=FBgn0259170.1.mrna1;geneID=FBgn0259170.1.path1;Name=FBgn0259170.1;Dir=sensecoverage=100.0;identity=99.9;matches=2283;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012621
Chr1	stalkie_big_nohaplotig	exon	152970180	152971082	99	+	.	Parent=FBgn0259170.1.mrna1;Target=FBgn0259170.1 1 903 +
Chr1	stalkie_big_nohaplotig	exon	153042399	153043011	100	+	.	Parent=FBgn0259170.1.mrna1;Target=FBgn0259170.1 904 1516 +
Chr1	stalkie_big_nohaplotig	exon	153043086	153043310	100	+	.	Parent=FBgn0259170.1.mrna1;Target=FBgn0259170.1 1517 1741 +
Chr1	stalkie_big_nohaplotig	exon	153043972	153044110	100	+	.	Parent=FBgn0259170.1.mrna1;Target=FBgn0259170.1 1742 1880 +
Chr1	stalkie_big_nohaplotig	exon	153044188	153044449	99	+	.	Parent=FBgn0259170.1.mrna1;Target=FBgn0259170.1 1881 2142 +
Chr1	stalkie_big_nohaplotig	exon	153044514	153044657	100	+	.	Parent=FBgn0259170.1.mrna1;Target=FBgn0259170.1 2143 2286 +
Chr1	stalkie_big_nohaplotig	CDS	152970180	152971082	.	+	0	Parent=FBgn0259170.1.mrna1;Target=FBgn0259170.1 1 903 +
Chr1	stalkie_big_nohaplotig	CDS	153042399	153043011	.	+	0	Parent=FBgn0259170.1.mrna1;Target=FBgn0259170.1 904 1516 +
Chr1	stalkie_big_nohaplotig	CDS	153043086	153043310	.	+	2	Parent=FBgn0259170.1.mrna1;Target=FBgn0259170.1 1517 1741 +
Chr1	stalkie_big_nohaplotig	CDS	153043972	153044110	.	+	2	Parent=FBgn0259170.1.mrna1;Target=FBgn0259170.1 1742 1880 +
Chr1	stalkie_big_nohaplotig	CDS	153044188	153044449	.	+	1	Parent=FBgn0259170.1.mrna1;Target=FBgn0259170.1 1881 2142 +
Chr1	stalkie_big_nohaplotig	CDS	153044514	153044657	.	+	0	Parent=FBgn0259170.1.mrna1;Target=FBgn0259170.1 2143 2286 +
Chr1	gffcl	locus	153048840	153050491	.	-	.	ID=RLOC_00012622;geneIDs=comp148887_c0_seq1.path1;transcripts=comp148887_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153048840	153050491	.	-	.	ID=comp148887_c0_seq1.mrna1;geneID=comp148887_c0_seq1.path1;Name=comp148887_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.6;matches=1634;mismatches=16;indels=7;unknowns=0;Target=comp148887_c0_seq1 1656 2 .;CDS_Target=comp148887_c0_seq1 1588 1337 .;locus=RLOC_00012622
Chr1	stalkie_big_nohaplotig	exon	153048840	153050491	98	-	.	Parent=comp148887_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153048908	153049161	.	-	0	Parent=comp148887_c0_seq1.mrna1
Chr1	gffcl	locus	153054681	153056141	.	-	.	ID=RLOC_00012623;geneIDs=FBgn0023216.path1,comp160148_c0_seq1.path1;transcripts=FBgn0023216.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153054681	153056141	.	-	.	ID=FBgn0023216.mrna1;geneID=FBgn0023216.path1;Name=FBgn0023216;Dir=sensecoverage=99.9;identity=99.5;matches=1275;mismatches=6;indels=0;unknowns=2;locus=RLOC_00012623
Chr1	stalkie_big_nohaplotig	exon	153054681	153055199	99	-	.	Parent=FBgn0023216.mrna1;Target=FBgn0023216 765 1283 +
Chr1	stalkie_big_nohaplotig	exon	153055262	153055590	99	-	.	Parent=FBgn0023216.mrna1;Target=FBgn0023216 436 764 +
Chr1	stalkie_big_nohaplotig	exon	153055648	153055973	99	-	.	Parent=FBgn0023216.mrna1;Target=FBgn0023216 110 435 +
Chr1	stalkie_big_nohaplotig	exon	153056033	153056141	98	-	.	Parent=FBgn0023216.mrna1;Target=FBgn0023216 1 109 +
Chr1	stalkie_big_nohaplotig	CDS	153054683	153055199	.	-	1	Parent=FBgn0023216.mrna1;Target=FBgn0023216 765 1281 +
Chr1	stalkie_big_nohaplotig	CDS	153055262	153055590	.	-	0	Parent=FBgn0023216.mrna1;Target=FBgn0023216 436 764 +
Chr1	stalkie_big_nohaplotig	CDS	153055648	153055973	.	-	2	Parent=FBgn0023216.mrna1;Target=FBgn0023216 110 435 +
Chr1	stalkie_big_nohaplotig	CDS	153056033	153056141	.	-	0	Parent=FBgn0023216.mrna1;Target=FBgn0023216 1 109 +
Chr1	gffcl	locus	153058873	153059616	.	-	.	ID=RLOC_00012624;geneIDs=FBgn0261593.1.path1;transcripts=FBgn0261593.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153058873	153059616	.	-	.	ID=FBgn0261593.1.mrna1;geneID=FBgn0261593.1.path1;Name=FBgn0261593.1;Dir=sensecoverage=100.0;identity=100.0;matches=531;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012624
Chr1	stalkie_big_nohaplotig	exon	153058873	153059346	100	-	.	Parent=FBgn0261593.1.mrna1;Target=FBgn0261593.1 58 531 +
Chr1	stalkie_big_nohaplotig	exon	153059560	153059616	100	-	.	Parent=FBgn0261593.1.mrna1;Target=FBgn0261593.1 1 57 +
Chr1	stalkie_big_nohaplotig	CDS	153058873	153059346	.	-	0	Parent=FBgn0261593.1.mrna1;Target=FBgn0261593.1 58 531 +
Chr1	stalkie_big_nohaplotig	CDS	153059560	153059616	.	-	0	Parent=FBgn0261593.1.mrna1;Target=FBgn0261593.1 1 57 +
Chr1	gffcl	locus	153062425	153067688	.	-	.	ID=RLOC_00012625;geneIDs=FBgn0030148.1.path1;transcripts=FBgn0030148.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153062425	153067688	.	-	.	ID=FBgn0030148.1.mrna1;geneID=FBgn0030148.1.path1;Name=FBgn0030148.1;Dir=sensecoverage=100.0;identity=99.7;matches=2217;mismatches=6;indels=0;unknowns=0;locus=RLOC_00012625
Chr1	stalkie_big_nohaplotig	exon	153062425	153062652	99	-	.	Parent=FBgn0030148.1.mrna1;Target=FBgn0030148.1 1996 2223 +
Chr1	stalkie_big_nohaplotig	exon	153062771	153063427	100	-	.	Parent=FBgn0030148.1.mrna1;Target=FBgn0030148.1 1339 1995 +
Chr1	stalkie_big_nohaplotig	exon	153063489	153063702	99	-	.	Parent=FBgn0030148.1.mrna1;Target=FBgn0030148.1 1125 1338 +
Chr1	stalkie_big_nohaplotig	exon	153063765	153063880	99	-	.	Parent=FBgn0030148.1.mrna1;Target=FBgn0030148.1 1009 1124 +
Chr1	stalkie_big_nohaplotig	exon	153063953	153064152	99	-	.	Parent=FBgn0030148.1.mrna1;Target=FBgn0030148.1 809 1008 +
Chr1	stalkie_big_nohaplotig	exon	153064221	153064294	100	-	.	Parent=FBgn0030148.1.mrna1;Target=FBgn0030148.1 735 808 +
Chr1	stalkie_big_nohaplotig	exon	153064364	153064793	99	-	.	Parent=FBgn0030148.1.mrna1;Target=FBgn0030148.1 305 734 +
Chr1	stalkie_big_nohaplotig	exon	153067385	153067688	99	-	.	Parent=FBgn0030148.1.mrna1;Target=FBgn0030148.1 1 304 +
Chr1	stalkie_big_nohaplotig	CDS	153062425	153062652	.	-	0	Parent=FBgn0030148.1.mrna1;Target=FBgn0030148.1 1996 2223 +
Chr1	stalkie_big_nohaplotig	CDS	153062771	153063427	.	-	0	Parent=FBgn0030148.1.mrna1;Target=FBgn0030148.1 1339 1995 +
Chr1	stalkie_big_nohaplotig	CDS	153063489	153063702	.	-	1	Parent=FBgn0030148.1.mrna1;Target=FBgn0030148.1 1125 1338 +
Chr1	stalkie_big_nohaplotig	CDS	153063765	153063880	.	-	0	Parent=FBgn0030148.1.mrna1;Target=FBgn0030148.1 1009 1124 +
Chr1	stalkie_big_nohaplotig	CDS	153063953	153064152	.	-	2	Parent=FBgn0030148.1.mrna1;Target=FBgn0030148.1 809 1008 +
Chr1	stalkie_big_nohaplotig	CDS	153064221	153064294	.	-	1	Parent=FBgn0030148.1.mrna1;Target=FBgn0030148.1 735 808 +
Chr1	stalkie_big_nohaplotig	CDS	153064364	153064793	.	-	2	Parent=FBgn0030148.1.mrna1;Target=FBgn0030148.1 305 734 +
Chr1	stalkie_big_nohaplotig	CDS	153067385	153067688	.	-	0	Parent=FBgn0030148.1.mrna1;Target=FBgn0030148.1 1 304 +
Chr1	gffcl	locus	153075779	153076144	.	-	.	ID=RLOC_00012626;geneIDs=comp149380_c0_seq1.path1;transcripts=comp149380_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153075779	153076144	.	-	.	ID=comp149380_c0_seq1.mrna1;geneID=comp149380_c0_seq1.path1;Name=comp149380_c0_seq1;Dir=indeterminatecoverage=70.8;identity=96.7;matches=354;mismatches=4;indels=8;unknowns=0;Target=comp149380_c0_seq1 506 149 .;CDS_Target=comp149380_c0_seq1 206 150 .;locus=RLOC_00012626
Chr1	stalkie_big_nohaplotig	exon	153075779	153076144	96	-	.	Parent=comp149380_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153076079	153076143	.	-	0	Parent=comp149380_c0_seq1.mrna1
Chr1	gffcl	locus	153093560	153096161	.	-	.	ID=RLOC_00012628;geneIDs=comp140080_c0_seq1.path1;transcripts=comp140080_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153093560	153096161	.	-	.	ID=comp140080_c0_seq1.mrna1;geneID=comp140080_c0_seq1.path1;Name=comp140080_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=1179;mismatches=1;indels=0;unknowns=0;Target=comp140080_c0_seq1 847 1149 +;locus=RLOC_00012628
Chr1	stalkie_big_nohaplotig	exon	153093560	153094211	100	-	.	Parent=comp140080_c0_seq1.mrna1;Target=comp140080_c0_seq1 529 1180 +
Chr1	stalkie_big_nohaplotig	exon	153095634	153096161	99	-	.	Parent=comp140080_c0_seq1.mrna1;Target=comp140080_c0_seq1 1 528 +
Chr1	stalkie_big_nohaplotig	CDS	153093591	153093893	.	-	0	Parent=comp140080_c0_seq1.mrna1
Chr1	gffcl	locus	153132305	153132881	.	+	.	ID=RLOC_00012629;geneIDs=comp150853_c0_seq1.path1;transcripts=comp150853_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153132305	153132881	.	+	.	ID=comp150853_c0_seq1.mrna1;geneID=comp150853_c0_seq1.path1;Name=comp150853_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.5;matches=574;mismatches=3;indels=0;unknowns=0;Target=comp150853_c0_seq1 587 11 .;CDS_Target=comp150853_c0_seq1 133 11 .;locus=RLOC_00012629
Chr1	stalkie_big_nohaplotig	exon	153132305	153132881	99	+	.	Parent=comp150853_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153132305	153132427	.	+	0	Parent=comp150853_c0_seq1.mrna1
Chr1	gffcl	locus	153133076	153134855	.	+	.	ID=RLOC_00012630;geneIDs=FBgn0000233.1.path1;transcripts=FBgn0000233.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153133076	153134855	.	+	.	ID=FBgn0000233.1.mrna1;geneID=FBgn0000233.1.path1;Name=FBgn0000233.1;Dir=sensecoverage=100.0;identity=99.3;matches=1585;mismatches=11;indels=0;unknowns=0;locus=RLOC_00012630
Chr1	stalkie_big_nohaplotig	exon	153133076	153133578	99	+	.	Parent=FBgn0000233.1.mrna1;Target=FBgn0000233.1 1 503 +
Chr1	stalkie_big_nohaplotig	exon	153133763	153134855	99	+	.	Parent=FBgn0000233.1.mrna1;Target=FBgn0000233.1 504 1596 +
Chr1	stalkie_big_nohaplotig	CDS	153133076	153133578	.	+	0	Parent=FBgn0000233.1.mrna1;Target=FBgn0000233.1 1 503 +
Chr1	stalkie_big_nohaplotig	CDS	153133763	153134855	.	+	1	Parent=FBgn0000233.1.mrna1;Target=FBgn0000233.1 504 1596 +
Chr1	gffcl	locus	153141771	153142365	.	-	.	ID=RLOC_00012631;geneIDs=comp80943_c0_seq1.path1;transcripts=comp80943_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153141771	153142365	.	-	.	ID=comp80943_c0_seq1.mrna1;geneID=comp80943_c0_seq1.path1;Name=comp80943_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.6;matches=583;mismatches=10;indels=23;unknowns=0;Target=comp80943_c0_seq1 614 1 .;CDS_Target=comp80943_c0_seq1 428 336 .;locus=RLOC_00012631
Chr1	stalkie_big_nohaplotig	exon	153141771	153142365	94	-	.	Parent=comp80943_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153141936	153142028	.	-	0	Parent=comp80943_c0_seq1.mrna1
Chr1	gffcl	locus	153176218	153177041	.	+	.	ID=RLOC_00012632;geneIDs=comp151163_c1_seq1.path1;transcripts=comp151163_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153176218	153177041	.	+	.	ID=comp151163_c1_seq1.mrna1;geneID=comp151163_c1_seq1.path1;Name=comp151163_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=822;mismatches=2;indels=0;unknowns=0;Target=comp151163_c1_seq1 824 1 .;CDS_Target=comp151163_c1_seq1 535 338 .;locus=RLOC_00012632
Chr1	stalkie_big_nohaplotig	exon	153176218	153177041	99	+	.	Parent=comp151163_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153176555	153176752	.	+	0	Parent=comp151163_c1_seq1.mrna1
Chr1	gffcl	locus	153208812	153208928	.	-	.	ID=RLOC_00012634;geneIDs=FBgn0020378.1.path1;transcripts=FBgn0020378.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153208812	153208928	.	-	.	ID=FBgn0020378.1.mrna1;geneID=FBgn0020378.1.path1;Name=FBgn0020378.1;Dir=indeterminatecoverage=6.4;identity=100.0;matches=117;mismatches=0;indels=0;unknowns=0;Target=FBgn0020378.1 117 1 .;locus=RLOC_00012634
Chr1	stalkie_big_nohaplotig	exon	153208812	153208928	100	-	.	Parent=FBgn0020378.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153208812	153208928	.	-	0	Parent=FBgn0020378.1.mrna1
Chr1	gffcl	locus	153319545	153322878	.	.	.	ID=RLOC_00012635;geneIDs=FBgn0030151.1.path1,comp156775_c0_seq1.path1;transcripts=FBgn0030151.1.mrna1,comp156775_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153319545	153322878	.	+	.	ID=FBgn0030151.1.mrna1;geneID=FBgn0030151.1.path1;Name=FBgn0030151.1;Dir=sensecoverage=100.0;identity=99.3;matches=1195;mismatches=8;indels=0;unknowns=0;locus=RLOC_00012635
Chr1	stalkie_big_nohaplotig	exon	153319545	153319737	99	+	.	Parent=FBgn0030151.1.mrna1;Target=FBgn0030151.1 1 193 +
Chr1	stalkie_big_nohaplotig	exon	153321013	153321073	100	+	.	Parent=FBgn0030151.1.mrna1;Target=FBgn0030151.1 194 254 +
Chr1	stalkie_big_nohaplotig	exon	153321152	153321533	99	+	.	Parent=FBgn0030151.1.mrna1;Target=FBgn0030151.1 255 636 +
Chr1	stalkie_big_nohaplotig	exon	153321596	153321931	98	+	.	Parent=FBgn0030151.1.mrna1;Target=FBgn0030151.1 637 972 +
Chr1	stalkie_big_nohaplotig	exon	153322648	153322878	100	+	.	Parent=FBgn0030151.1.mrna1;Target=FBgn0030151.1 973 1203 +
Chr1	stalkie_big_nohaplotig	CDS	153319545	153319737	.	+	0	Parent=FBgn0030151.1.mrna1;Target=FBgn0030151.1 1 193 +
Chr1	stalkie_big_nohaplotig	CDS	153321013	153321073	.	+	2	Parent=FBgn0030151.1.mrna1;Target=FBgn0030151.1 194 254 +
Chr1	stalkie_big_nohaplotig	CDS	153321152	153321533	.	+	1	Parent=FBgn0030151.1.mrna1;Target=FBgn0030151.1 255 636 +
Chr1	stalkie_big_nohaplotig	CDS	153321596	153321931	.	+	0	Parent=FBgn0030151.1.mrna1;Target=FBgn0030151.1 637 972 +
Chr1	stalkie_big_nohaplotig	CDS	153322648	153322878	.	+	0	Parent=FBgn0030151.1.mrna1;Target=FBgn0030151.1 973 1203 +
Chr1	stalkie_big_nohaplotig	mRNA	153319811	153321035	.	-	.	ID=comp156775_c0_seq1.mrna1;geneID=comp156775_c0_seq1.path1;Name=comp156775_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=1218;mismatches=7;indels=29;unknowns=0;Target=comp156775_c0_seq1 1254 1 .;CDS_Target=comp156775_c0_seq1 558 247 .;locus=RLOC_00012635
Chr1	stalkie_big_nohaplotig	exon	153319811	153321035	97	-	.	Parent=comp156775_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153320478	153320789	.	-	0	Parent=comp156775_c0_seq1.mrna1
Chr1	gffcl	locus	153323193	153325284	.	+	.	ID=RLOC_00012636;geneIDs=ORF1943.path1,comp163185_c1_seq1.path1;transcripts=comp163185_c1_seq1.mrna1,ORF1943.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153323193	153325284	.	+	.	ID=comp163185_c1_seq1.mrna1;geneID=comp163185_c1_seq1.path1;Name=comp163185_c1_seq1;Dir=sensecoverage=99.9;identity=96.3;matches=1781;mismatches=52;indels=17;unknowns=0;Target=comp163185_c1_seq1 1089 1553 +;locus=RLOC_00012636
Chr1	stalkie_big_nohaplotig	exon	153323193	153323496	93	+	.	Parent=comp163185_c1_seq1.mrna1;Target=comp163185_c1_seq1 2 304 +
Chr1	stalkie_big_nohaplotig	exon	153323540	153323966	98	+	.	Parent=comp163185_c1_seq1.mrna1;Target=comp163185_c1_seq1 305 731 +
Chr1	stalkie_big_nohaplotig	exon	153324171	153325284	96	+	.	Parent=comp163185_c1_seq1.mrna1;Target=comp163185_c1_seq1 732 1839 +
Chr1	stalkie_big_nohaplotig	CDS	153324528	153324992	.	+	0	Parent=comp163185_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153323762	153324989	.	+	.	ID=ORF1943.mrna1;geneID=ORF1943.path1;Name=ORF1943;Dir=sensecoverage=100.0;identity=97.9;matches=937;mismatches=20;indels=0;unknowns=0;locus=RLOC_00012636
Chr1	stalkie_big_nohaplotig	exon	153323762	153323966	99	+	.	Parent=ORF1943.mrna1;Target=ORF1943 1 205 +
Chr1	stalkie_big_nohaplotig	exon	153324171	153324349	97	+	.	Parent=ORF1943.mrna1;Target=ORF1943 206 384 +
Chr1	stalkie_big_nohaplotig	exon	153324417	153324989	97	+	.	Parent=ORF1943.mrna1;Target=ORF1943 385 957 +
Chr1	stalkie_big_nohaplotig	CDS	153323762	153323966	.	+	0	Parent=ORF1943.mrna1;Target=ORF1943 1 205 +
Chr1	stalkie_big_nohaplotig	CDS	153324171	153324349	.	+	2	Parent=ORF1943.mrna1;Target=ORF1943 206 384 +
Chr1	stalkie_big_nohaplotig	CDS	153324417	153324989	.	+	0	Parent=ORF1943.mrna1;Target=ORF1943 385 957 +
Chr1	gffcl	locus	153328730	153331430	.	+	.	ID=RLOC_00012637;geneIDs=comp162766_c0_seq1.path1;transcripts=comp162766_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153328730	153331430	.	+	.	ID=comp162766_c0_seq1.mrna1;geneID=comp162766_c0_seq1.path1;Name=comp162766_c0_seq1;Dir=antisensecoverage=99.1;identity=93.6;matches=1735;mismatches=62;indels=56;unknowns=0;locus=RLOC_00012637
Chr1	stalkie_big_nohaplotig	exon	153328730	153328973	99	+	.	Parent=comp162766_c0_seq1.mrna1;Target=comp162766_c0_seq1 1621 1864 -
Chr1	stalkie_big_nohaplotig	exon	153329666	153329961	100	+	.	Parent=comp162766_c0_seq1.mrna1;Target=comp162766_c0_seq1 1325 1620 -
Chr1	stalkie_big_nohaplotig	exon	153330038	153330204	91	+	.	Parent=comp162766_c0_seq1.mrna1;Target=comp162766_c0_seq1 1158 1324 -
Chr1	stalkie_big_nohaplotig	exon	153330271	153330946	88	+	.	Parent=comp162766_c0_seq1.mrna1;Target=comp162766_c0_seq1 435 1157 -
Chr1	stalkie_big_nohaplotig	exon	153330960	153331098	90	+	.	Parent=comp162766_c0_seq1.mrna1;Target=comp162766_c0_seq1 299 434 -
Chr1	stalkie_big_nohaplotig	exon	153331150	153331430	98	+	.	Parent=comp162766_c0_seq1.mrna1;Target=comp162766_c0_seq1 18 298 -
Chr1	stalkie_big_nohaplotig	CDS	153328869	153328973	.	+	0	Parent=comp162766_c0_seq1.mrna1;Target=comp162766_c0_seq1 1621 1725 .
Chr1	stalkie_big_nohaplotig	CDS	153329666	153329938	.	+	0	Parent=comp162766_c0_seq1.mrna1;Target=comp162766_c0_seq1 1348 1620 .
Chr1	gffcl	locus	153371867	153520345	.	+	.	ID=RLOC_00012638;geneIDs=comp160373_c0_seq1.path1;transcripts=comp160373_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153371867	153520345	.	+	.	ID=comp160373_c0_seq1.mrna1;geneID=comp160373_c0_seq1.path1;Name=comp160373_c0_seq1;Dir=indeterminatecoverage=93.0;identity=87.3;matches=1103;mismatches=29;indels=131;unknowns=0;Target=comp160373_c0_seq1 866 705 .;locus=RLOC_00012638
Chr1	stalkie_big_nohaplotig	exon	153371867	153371874	100	+	.	Parent=comp160373_c0_seq1.mrna1;Target=comp160373_c0_seq1 106 99 .
Chr1	stalkie_big_nohaplotig	exon	153380304	153380313	100	+	.	Parent=comp160373_c0_seq1.mrna1;Target=comp160373_c0_seq1 116 107 .
Chr1	stalkie_big_nohaplotig	exon	153402159	153402163	100	+	.	Parent=comp160373_c0_seq1.mrna1;Target=comp160373_c0_seq1 121 117 .
Chr1	stalkie_big_nohaplotig	exon	153412035	153412037	100	+	.	Parent=comp160373_c0_seq1.mrna1;Target=comp160373_c0_seq1 124 122 .
Chr1	stalkie_big_nohaplotig	exon	153422053	153422087	68	+	.	Parent=comp160373_c0_seq1.mrna1;Target=comp160373_c0_seq1 153 125 .
Chr1	stalkie_big_nohaplotig	exon	153430276	153430278	100	+	.	Parent=comp160373_c0_seq1.mrna1;Target=comp160373_c0_seq1 156 154 .
Chr1	stalkie_big_nohaplotig	exon	153438251	153438270	38	+	.	Parent=comp160373_c0_seq1.mrna1;Target=comp160373_c0_seq1 205 157 .
Chr1	stalkie_big_nohaplotig	exon	153450962	153450965	100	+	.	Parent=comp160373_c0_seq1.mrna1;Target=comp160373_c0_seq1 209 206 .
Chr1	stalkie_big_nohaplotig	exon	153475296	153475300	100	+	.	Parent=comp160373_c0_seq1.mrna1;Target=comp160373_c0_seq1 214 210 .
Chr1	stalkie_big_nohaplotig	exon	153483078	153483088	100	+	.	Parent=comp160373_c0_seq1.mrna1;Target=comp160373_c0_seq1 225 215 .
Chr1	stalkie_big_nohaplotig	exon	153485241	153485245	100	+	.	Parent=comp160373_c0_seq1.mrna1;Target=comp160373_c0_seq1 230 226 .
Chr1	stalkie_big_nohaplotig	exon	153485248	153485254	100	+	.	Parent=comp160373_c0_seq1.mrna1;Target=comp160373_c0_seq1 273 267 .
Chr1	stalkie_big_nohaplotig	exon	153519324	153520345	89	+	.	Parent=comp160373_c0_seq1.mrna1;Target=comp160373_c0_seq1 1391 274 .
Chr1	stalkie_big_nohaplotig	CDS	153519729	153519890	.	+	0	Parent=comp160373_c0_seq1.mrna1
Chr1	gffcl	locus	153404344	153410235	.	.	.	ID=RLOC_00012639;geneIDs=FBgn0026415.1.path1,comp155493_c0_seq1.path1;transcripts=FBgn0026415.1.mrna1,comp155493_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153404344	153410235	.	-	.	ID=FBgn0026415.1.mrna1;geneID=FBgn0026415.1.path1;Name=FBgn0026415.1;Dir=sensecoverage=100.0;identity=99.8;matches=1314;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012639
Chr1	stalkie_big_nohaplotig	exon	153404344	153404987	100	-	.	Parent=FBgn0026415.1.mrna1;Target=FBgn0026415.1 674 1317 +
Chr1	stalkie_big_nohaplotig	exon	153405050	153405610	99	-	.	Parent=FBgn0026415.1.mrna1;Target=FBgn0026415.1 113 673 +
Chr1	stalkie_big_nohaplotig	exon	153410124	153410235	100	-	.	Parent=FBgn0026415.1.mrna1;Target=FBgn0026415.1 1 112 +
Chr1	stalkie_big_nohaplotig	CDS	153404344	153404987	.	-	2	Parent=FBgn0026415.1.mrna1;Target=FBgn0026415.1 674 1317 +
Chr1	stalkie_big_nohaplotig	CDS	153405050	153405610	.	-	2	Parent=FBgn0026415.1.mrna1;Target=FBgn0026415.1 113 673 +
Chr1	stalkie_big_nohaplotig	CDS	153410124	153410235	.	-	0	Parent=FBgn0026415.1.mrna1;Target=FBgn0026415.1 1 112 +
Chr1	stalkie_big_nohaplotig	mRNA	153405590	153406311	.	+	.	ID=comp155493_c0_seq1.mrna1;geneID=comp155493_c0_seq1.path1;Name=comp155493_c0_seq1;Dir=indeterminatecoverage=98.4;identity=96.8;matches=701;mismatches=19;indels=4;unknowns=0;Target=comp155493_c0_seq1 722 1 .;CDS_Target=comp155493_c0_seq1 38 3 .;locus=RLOC_00012639
Chr1	stalkie_big_nohaplotig	exon	153405590	153406311	96	+	.	Parent=comp155493_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153405592	153405628	.	+	0	Parent=comp155493_c0_seq1.mrna1
Chr1	gffcl	locus	153407012	153408317	.	-	.	ID=RLOC_00012640;geneIDs=comp156411_c0_seq1.path1;transcripts=comp156411_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153407012	153408317	.	-	.	ID=comp156411_c0_seq1.mrna1;geneID=comp156411_c0_seq1.path1;Name=comp156411_c0_seq1;Dir=indeterminatecoverage=100.0;identity=83.6;matches=1199;mismatches=64;indels=172;unknowns=0;Target=comp156411_c0_seq1 1392 1 .;CDS_Target=comp156411_c0_seq1 1272 1093 .;locus=RLOC_00012640
Chr1	stalkie_big_nohaplotig	exon	153407012	153408317	83	-	.	Parent=comp156411_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153407127	153407290	.	-	0	Parent=comp156411_c0_seq1.mrna1
Chr1	gffcl	locus	153462487	153463387	.	-	.	ID=RLOC_00012641;geneIDs=comp155480_c0_seq1.path2;transcripts=comp155480_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	153462487	153463387	.	-	.	ID=comp155480_c0_seq1.mrna2;geneID=comp155480_c0_seq1.path2;Name=comp155480_c0_seq1;Dir=indeterminatecoverage=99.1;identity=96.9;matches=875;mismatches=22;indels=6;unknowns=0;Target=comp155480_c0_seq1 899 1 .;CDS_Target=comp155480_c0_seq1 673 305 .;locus=RLOC_00012641
Chr1	stalkie_big_nohaplotig	exon	153462487	153463387	96	-	.	Parent=comp155480_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	153462715	153463083	.	-	0	Parent=comp155480_c0_seq1.mrna2
Chr1	gffcl	locus	153464140	153465318	.	-	.	ID=RLOC_00012642;geneIDs=comp154268_c0_seq1.path1;transcripts=comp154268_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153464140	153465318	.	-	.	ID=comp154268_c0_seq1.mrna1;geneID=comp154268_c0_seq1.path1;Name=comp154268_c0_seq1;Dir=indeterminatecoverage=99.8;identity=93.9;matches=1152;mismatches=27;indels=48;unknowns=0;Target=comp154268_c0_seq1 1227 1 .;CDS_Target=comp154268_c0_seq1 554 87 .;locus=RLOC_00012642
Chr1	stalkie_big_nohaplotig	exon	153464140	153465318	93	-	.	Parent=comp154268_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153464765	153465232	.	-	0	Parent=comp154268_c0_seq1.mrna1
Chr1	gffcl	locus	153521496	153521880	.	-	.	ID=RLOC_00012643;geneIDs=FBgn0030160.1.path1;transcripts=FBgn0030160.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153521496	153521880	.	-	.	ID=FBgn0030160.1.mrna1;geneID=FBgn0030160.1.path1;Name=FBgn0030160.1;Dir=indeterminatecoverage=99.5;identity=99.0;matches=381;mismatches=4;indels=0;unknowns=0;Target=FBgn0030160.1 385 1 .;CDS_Target=FBgn0030160.1 384 1 .;locus=RLOC_00012643
Chr1	stalkie_big_nohaplotig	exon	153521496	153521880	98	-	.	Parent=FBgn0030160.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153521497	153521880	.	-	0	Parent=FBgn0030160.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155509043	155513904	.	+	.	ID=FBgn0003023.1.mrna1;geneID=FBgn0003023.1.path1;Name=FBgn0003023.1;Dir=sensecoverage=100.0;identity=99.6;matches=3117;mismatches=6;indels=6;unknowns=0;locus=RLOC_00012644
Chr1	stalkie_big_nohaplotig	exon	155509043	155509261	100	+	.	Parent=FBgn0003023.1.mrna1;Target=FBgn0003023.1 1 219 +
Chr1	stalkie_big_nohaplotig	exon	155509318	155509415	100	+	.	Parent=FBgn0003023.1.mrna1;Target=FBgn0003023.1 220 317 +
Chr1	stalkie_big_nohaplotig	exon	155509477	155509631	100	+	.	Parent=FBgn0003023.1.mrna1;Target=FBgn0003023.1 318 472 +
Chr1	stalkie_big_nohaplotig	exon	155509691	155510038	100	+	.	Parent=FBgn0003023.1.mrna1;Target=FBgn0003023.1 473 820 +
Chr1	stalkie_big_nohaplotig	exon	155510321	155510457	100	+	.	Parent=FBgn0003023.1.mrna1;Target=FBgn0003023.1 821 957 +
Chr1	stalkie_big_nohaplotig	exon	155510715	155510846	97	+	.	Parent=FBgn0003023.1.mrna1;Target=FBgn0003023.1 958 1089 +
Chr1	stalkie_big_nohaplotig	exon	155510900	155511857	99	+	.	Parent=FBgn0003023.1.mrna1;Target=FBgn0003023.1 1090 2047 +
Chr1	stalkie_big_nohaplotig	exon	155511917	155511990	100	+	.	Parent=FBgn0003023.1.mrna1;Target=FBgn0003023.1 2048 2121 +
Chr1	stalkie_big_nohaplotig	exon	155512050	155512379	100	+	.	Parent=FBgn0003023.1.mrna1;Target=FBgn0003023.1 2122 2451 +
Chr1	stalkie_big_nohaplotig	exon	155512644	155513156	99	+	.	Parent=FBgn0003023.1.mrna1;Target=FBgn0003023.1 2452 2964 +
Chr1	stalkie_big_nohaplotig	exon	155513740	155513904	96	+	.	Parent=FBgn0003023.1.mrna1;Target=FBgn0003023.1 2965 3123 +
Chr1	stalkie_big_nohaplotig	CDS	155509043	155509261	.	+	0	Parent=FBgn0003023.1.mrna1;Target=FBgn0003023.1 1 219 +
Chr1	stalkie_big_nohaplotig	CDS	155509318	155509415	.	+	0	Parent=FBgn0003023.1.mrna1;Target=FBgn0003023.1 220 317 +
Chr1	stalkie_big_nohaplotig	CDS	155509477	155509631	.	+	1	Parent=FBgn0003023.1.mrna1;Target=FBgn0003023.1 318 472 +
Chr1	stalkie_big_nohaplotig	CDS	155509691	155510038	.	+	2	Parent=FBgn0003023.1.mrna1;Target=FBgn0003023.1 473 820 +
Chr1	stalkie_big_nohaplotig	CDS	155510321	155510457	.	+	2	Parent=FBgn0003023.1.mrna1;Target=FBgn0003023.1 821 957 +
Chr1	stalkie_big_nohaplotig	CDS	155510715	155510846	.	+	0	Parent=FBgn0003023.1.mrna1;Target=FBgn0003023.1 958 1089 +
Chr1	stalkie_big_nohaplotig	CDS	155510900	155511857	.	+	0	Parent=FBgn0003023.1.mrna1;Target=FBgn0003023.1 1090 2047 +
Chr1	stalkie_big_nohaplotig	CDS	155511917	155511990	.	+	2	Parent=FBgn0003023.1.mrna1;Target=FBgn0003023.1 2048 2121 +
Chr1	stalkie_big_nohaplotig	CDS	155512050	155512379	.	+	0	Parent=FBgn0003023.1.mrna1;Target=FBgn0003023.1 2122 2451 +
Chr1	stalkie_big_nohaplotig	CDS	155512644	155513156	.	+	0	Parent=FBgn0003023.1.mrna1;Target=FBgn0003023.1 2452 2964 +
Chr1	stalkie_big_nohaplotig	CDS	155513740	155513904	.	+	0	Parent=FBgn0003023.1.mrna1;Target=FBgn0003023.1 2965 3123 +
Chr1	gffcl	locus	153540105	153541035	.	+	.	ID=RLOC_00012645;geneIDs=comp155772_c0_seq1.path1;transcripts=comp155772_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153540105	153541035	.	+	.	ID=comp155772_c0_seq1.mrna1;geneID=comp155772_c0_seq1.path1;Name=comp155772_c0_seq1;Dir=indeterminatecoverage=97.4;identity=99.1;matches=923;mismatches=8;indels=0;unknowns=0;Target=comp155772_c0_seq1 931 1 .;CDS_Target=comp155772_c0_seq1 590 417 .;locus=RLOC_00012645
Chr1	stalkie_big_nohaplotig	exon	153540105	153541035	99	+	.	Parent=comp155772_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153540521	153540694	.	+	0	Parent=comp155772_c0_seq1.mrna1
Chr1	gffcl	locus	153543729	153544316	.	-	.	ID=RLOC_00012646;geneIDs=FBgn0030158.1.path1;transcripts=FBgn0030158.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153543729	153544316	.	-	.	ID=FBgn0030158.1.mrna1;geneID=FBgn0030158.1.path1;Name=FBgn0030158.1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=583;mismatches=5;indels=0;unknowns=0;Target=FBgn0030158.1 588 1 .;locus=RLOC_00012646
Chr1	stalkie_big_nohaplotig	exon	153543729	153544316	99	-	.	Parent=FBgn0030158.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153543729	153544316	.	-	0	Parent=FBgn0030158.1.mrna1
Chr1	gffcl	locus	153560432	153561190	.	+	.	ID=RLOC_00012648;geneIDs=comp142787_c0_seq1.path1;transcripts=comp142787_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153560432	153561190	.	+	.	ID=comp142787_c0_seq1.mrna1;geneID=comp142787_c0_seq1.path1;Name=comp142787_c0_seq1;Dir=antisensecoverage=97.8;identity=99.7;matches=675;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012648
Chr1	stalkie_big_nohaplotig	exon	153560432	153560790	100	+	.	Parent=comp142787_c0_seq1.mrna1;Target=comp142787_c0_seq1 334 692 -
Chr1	stalkie_big_nohaplotig	exon	153560873	153561190	99	+	.	Parent=comp142787_c0_seq1.mrna1;Target=comp142787_c0_seq1 16 333 -
Chr1	stalkie_big_nohaplotig	CDS	153560599	153560790	.	+	0	Parent=comp142787_c0_seq1.mrna1;Target=comp142787_c0_seq1 334 525 .
Chr1	stalkie_big_nohaplotig	CDS	153560873	153560881	.	+	0	Parent=comp142787_c0_seq1.mrna1;Target=comp142787_c0_seq1 325 333 .
Chr1	gffcl	locus	153563292	153564815	.	+	.	ID=RLOC_00012649;geneIDs=comp151340_c0_seq1.path1;transcripts=comp151340_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153563292	153564815	.	+	.	ID=comp151340_c0_seq1.mrna1;geneID=comp151340_c0_seq1.path1;Name=comp151340_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=907;mismatches=1;indels=2;unknowns=0;locus=RLOC_00012649
Chr1	stalkie_big_nohaplotig	exon	153563292	153563910	99	+	.	Parent=comp151340_c0_seq1.mrna1;Target=comp151340_c0_seq1 290 908 -
Chr1	stalkie_big_nohaplotig	exon	153564525	153564815	99	+	.	Parent=comp151340_c0_seq1.mrna1;Target=comp151340_c0_seq1 1 289 -
Chr1	stalkie_big_nohaplotig	CDS	153563679	153563910	.	+	0	Parent=comp151340_c0_seq1.mrna1;Target=comp151340_c0_seq1 290 521 .
Chr1	stalkie_big_nohaplotig	CDS	153564525	153564541	.	+	2	Parent=comp151340_c0_seq1.mrna1;Target=comp151340_c0_seq1 273 289 .
Chr1	gffcl	locus	153572221	153574565	.	+	.	ID=RLOC_00012650;geneIDs=comp152745_c0_seq1.path1;transcripts=comp152745_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153572221	153574565	.	+	.	ID=comp152745_c0_seq1.mrna1;geneID=comp152745_c0_seq1.path1;Name=comp152745_c0_seq1;Dir=sensecoverage=100.0;identity=96.9;matches=562;mismatches=4;indels=14;unknowns=0;Target=comp152745_c0_seq1 144 362 +;locus=RLOC_00012650
Chr1	stalkie_big_nohaplotig	exon	153572221	153572638	95	+	.	Parent=comp152745_c0_seq1.mrna1;Target=comp152745_c0_seq1 1 416 +
Chr1	stalkie_big_nohaplotig	exon	153574410	153574565	100	+	.	Parent=comp152745_c0_seq1.mrna1;Target=comp152745_c0_seq1 417 572 +
Chr1	stalkie_big_nohaplotig	CDS	153572366	153572584	.	+	0	Parent=comp152745_c0_seq1.mrna1
Chr1	gffcl	locus	153603864	153605246	.	+	.	ID=RLOC_00012652;geneIDs=comp157316_c0_seq1.path1;transcripts=comp157316_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153603864	153605246	.	+	.	ID=comp157316_c0_seq1.mrna1;geneID=comp157316_c0_seq1.path1;Name=comp157316_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.8;matches=1346;mismatches=37;indels=8;unknowns=0;Target=comp157316_c0_seq1 1393 3 .;CDS_Target=comp157316_c0_seq1 973 866 .;locus=RLOC_00012652
Chr1	stalkie_big_nohaplotig	exon	153603864	153605246	96	+	.	Parent=comp157316_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153604719	153604826	.	+	0	Parent=comp157316_c0_seq1.mrna1
Chr1	gffcl	locus	153610591	153611351	.	+	.	ID=RLOC_00012653;geneIDs=comp143185_c0_seq1.path1;transcripts=comp143185_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153610591	153611351	.	+	.	ID=comp143185_c0_seq1.mrna1;geneID=comp143185_c0_seq1.path1;Name=comp143185_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=754;mismatches=7;indels=4;unknowns=0;Target=comp143185_c0_seq1 765 1 .;CDS_Target=comp143185_c0_seq1 593 486 .;locus=RLOC_00012653
Chr1	stalkie_big_nohaplotig	exon	153610591	153611351	98	+	.	Parent=comp143185_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153611072	153611179	.	+	0	Parent=comp143185_c0_seq1.mrna1
Chr1	gffcl	locus	153665381	153666146	.	+	.	ID=RLOC_00012655;geneIDs=comp156344_c0_seq1.path1;transcripts=comp156344_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153665381	153666146	.	+	.	ID=comp156344_c0_seq1.mrna1;geneID=comp156344_c0_seq1.path1;Name=comp156344_c0_seq1;Dir=antisensecoverage=98.9;identity=98.6;matches=702;mismatches=10;indels=0;unknowns=0;Target=comp156344_c0_seq1 57 557 .;locus=RLOC_00012655
Chr1	stalkie_big_nohaplotig	exon	153665381	153665534	99	+	.	Parent=comp156344_c0_seq1.mrna1;Target=comp156344_c0_seq1 560 713 -
Chr1	stalkie_big_nohaplotig	exon	153665589	153666146	98	+	.	Parent=comp156344_c0_seq1.mrna1;Target=comp156344_c0_seq1 2 559 -
Chr1	stalkie_big_nohaplotig	CDS	153665591	153666091	.	+	0	Parent=comp156344_c0_seq1.mrna1
Chr1	gffcl	locus	153698120	153698603	.	-	.	ID=RLOC_00012656;geneIDs=comp133434_c3_seq1.path1;transcripts=comp133434_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153698120	153698603	.	-	.	ID=comp133434_c3_seq1.mrna1;geneID=comp133434_c3_seq1.path1;Name=comp133434_c3_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=483;mismatches=1;indels=0;unknowns=0;Target=comp133434_c3_seq1 484 1 .;CDS_Target=comp133434_c3_seq1 413 354 .;locus=RLOC_00012656
Chr1	stalkie_big_nohaplotig	exon	153698120	153698603	99	-	.	Parent=comp133434_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153698191	153698250	.	-	0	Parent=comp133434_c3_seq1.mrna1
Chr1	gffcl	locus	153713534	153713912	.	-	.	ID=RLOC_00012657;geneIDs=comp117619_c0_seq1.path1;transcripts=comp117619_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153713534	153713912	.	-	.	ID=comp117619_c0_seq1.mrna1;geneID=comp117619_c0_seq1.path1;Name=comp117619_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=376;mismatches=3;indels=0;unknowns=0;Target=comp117619_c0_seq1 379 1 .;CDS_Target=comp117619_c0_seq1 276 196 .;locus=RLOC_00012657
Chr1	stalkie_big_nohaplotig	exon	153713534	153713912	99	-	.	Parent=comp117619_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153713637	153713717	.	-	0	Parent=comp117619_c0_seq1.mrna1
Chr1	gffcl	locus	153715757	153716377	.	-	.	ID=RLOC_00012658;geneIDs=comp146146_c0_seq1.path1;transcripts=comp146146_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153715757	153716377	.	-	.	ID=comp146146_c0_seq1.mrna1;geneID=comp146146_c0_seq1.path1;Name=comp146146_c0_seq1;Dir=indeterminatecoverage=99.4;identity=98.4;matches=611;mismatches=9;indels=1;unknowns=0;Target=comp146146_c0_seq1 624 5 .;CDS_Target=comp146146_c0_seq1 295 194 .;locus=RLOC_00012658
Chr1	stalkie_big_nohaplotig	exon	153715757	153716377	98	-	.	Parent=comp146146_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153716087	153716188	.	-	0	Parent=comp146146_c0_seq1.mrna1
Chr1	gffcl	locus	153718254	153719083	.	+	.	ID=RLOC_00012659;geneIDs=comp155588_c0_seq1.path1;transcripts=comp155588_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153718254	153719083	.	+	.	ID=comp155588_c0_seq1.mrna1;geneID=comp155588_c0_seq1.path1;Name=comp155588_c0_seq1;Dir=indeterminatecoverage=99.5;identity=98.2;matches=823;mismatches=7;indels=8;unknowns=0;Target=comp155588_c0_seq1 839 2 .;CDS_Target=comp155588_c0_seq1 594 229 .;locus=RLOC_00012659
Chr1	stalkie_big_nohaplotig	exon	153718254	153719083	98	+	.	Parent=comp155588_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153718473	153718838	.	+	0	Parent=comp155588_c0_seq1.mrna1
Chr1	gffcl	locus	153727813	153737491	.	-	.	ID=RLOC_00012660;geneIDs=FBgn0263216.1.path1;transcripts=FBgn0263216.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153727813	153737491	.	-	.	ID=FBgn0263216.1.mrna1;geneID=FBgn0263216.1.path1;Name=FBgn0263216.1;Dir=sensecoverage=100.0;identity=99.5;matches=612;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012660
Chr1	stalkie_big_nohaplotig	exon	153727813	153728178	99	-	.	Parent=FBgn0263216.1.mrna1;Target=FBgn0263216.1 250 615 +
Chr1	stalkie_big_nohaplotig	exon	153728270	153728362	100	-	.	Parent=FBgn0263216.1.mrna1;Target=FBgn0263216.1 157 249 +
Chr1	stalkie_big_nohaplotig	exon	153737336	153737491	100	-	.	Parent=FBgn0263216.1.mrna1;Target=FBgn0263216.1 1 156 +
Chr1	stalkie_big_nohaplotig	CDS	153727813	153728178	.	-	0	Parent=FBgn0263216.1.mrna1;Target=FBgn0263216.1 250 615 +
Chr1	stalkie_big_nohaplotig	CDS	153728270	153728362	.	-	0	Parent=FBgn0263216.1.mrna1;Target=FBgn0263216.1 157 249 +
Chr1	stalkie_big_nohaplotig	CDS	153737336	153737491	.	-	0	Parent=FBgn0263216.1.mrna1;Target=FBgn0263216.1 1 156 +
Chr1	gffcl	locus	153784598	153813211	.	+	.	ID=RLOC_00012661;geneIDs=FBgn0052694.1.path1;transcripts=FBgn0052694.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153784598	153813211	.	+	.	ID=FBgn0052694.1.mrna1;geneID=FBgn0052694.1.path1;Name=FBgn0052694.1;Dir=sensecoverage=100.0;identity=99.7;matches=963;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012661
Chr1	stalkie_big_nohaplotig	exon	153784598	153784759	100	+	.	Parent=FBgn0052694.1.mrna1;Target=FBgn0052694.1 1 162 +
Chr1	stalkie_big_nohaplotig	exon	153802115	153802222	100	+	.	Parent=FBgn0052694.1.mrna1;Target=FBgn0052694.1 163 270 +
Chr1	stalkie_big_nohaplotig	exon	153811038	153811330	99	+	.	Parent=FBgn0052694.1.mrna1;Target=FBgn0052694.1 271 563 +
Chr1	stalkie_big_nohaplotig	exon	153812189	153812327	99	+	.	Parent=FBgn0052694.1.mrna1;Target=FBgn0052694.1 564 702 +
Chr1	stalkie_big_nohaplotig	exon	153812883	153813083	100	+	.	Parent=FBgn0052694.1.mrna1;Target=FBgn0052694.1 703 903 +
Chr1	stalkie_big_nohaplotig	exon	153813149	153813211	100	+	.	Parent=FBgn0052694.1.mrna1;Target=FBgn0052694.1 904 966 +
Chr1	stalkie_big_nohaplotig	CDS	153784598	153784759	.	+	0	Parent=FBgn0052694.1.mrna1;Target=FBgn0052694.1 1 162 +
Chr1	stalkie_big_nohaplotig	CDS	153802115	153802222	.	+	0	Parent=FBgn0052694.1.mrna1;Target=FBgn0052694.1 163 270 +
Chr1	stalkie_big_nohaplotig	CDS	153811038	153811330	.	+	0	Parent=FBgn0052694.1.mrna1;Target=FBgn0052694.1 271 563 +
Chr1	stalkie_big_nohaplotig	CDS	153812189	153812327	.	+	1	Parent=FBgn0052694.1.mrna1;Target=FBgn0052694.1 564 702 +
Chr1	stalkie_big_nohaplotig	CDS	153812883	153813083	.	+	0	Parent=FBgn0052694.1.mrna1;Target=FBgn0052694.1 703 903 +
Chr1	stalkie_big_nohaplotig	CDS	153813149	153813211	.	+	0	Parent=FBgn0052694.1.mrna1;Target=FBgn0052694.1 904 966 +
Chr1	gffcl	locus	153802457	153803621	.	+	.	ID=RLOC_00012662;geneIDs=comp156736_c0_seq1.path1;transcripts=comp156736_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153802457	153803621	.	+	.	ID=comp156736_c0_seq1.mrna1;geneID=comp156736_c0_seq1.path1;Name=comp156736_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=1149;mismatches=13;indels=4;unknowns=0;Target=comp156736_c0_seq1 1163 1 .;CDS_Target=comp156736_c0_seq1 221 102 .;locus=RLOC_00012662
Chr1	stalkie_big_nohaplotig	exon	153802457	153803621	98	+	.	Parent=comp156736_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153802558	153802677	.	+	0	Parent=comp156736_c0_seq1.mrna1
Chr1	gffcl	locus	153805463	153806430	.	-	.	ID=RLOC_00012664;geneIDs=comp157173_c1_seq1.path1;transcripts=comp157173_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153805463	153806430	.	-	.	ID=comp157173_c1_seq1.mrna1;geneID=comp157173_c1_seq1.path1;Name=comp157173_c1_seq1;Dir=indeterminatecoverage=98.3;identity=91.8;matches=891;mismatches=26;indels=54;unknowns=0;Target=comp157173_c1_seq1 920 1 .;CDS_Target=comp157173_c1_seq1 190 110 .;locus=RLOC_00012664
Chr1	stalkie_big_nohaplotig	exon	153805463	153806430	91	-	.	Parent=comp157173_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153806244	153806324	.	-	0	Parent=comp157173_c1_seq1.mrna1
Chr1	gffcl	locus	153807242	153810894	.	-	.	ID=RLOC_00012665;geneIDs=comp163401_c0_seq1.path1;transcripts=comp163401_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153807242	153810894	.	-	.	ID=comp163401_c0_seq1.mrna1;geneID=comp163401_c0_seq1.path1;Name=comp163401_c0_seq1;Dir=indeterminatecoverage=99.6;identity=96.2;matches=3565;mismatches=83;indels=58;unknowns=0;Target=comp163401_c0_seq1 3701 1 .;CDS_Target=comp163401_c0_seq1 3507 3334 .;locus=RLOC_00012665
Chr1	stalkie_big_nohaplotig	exon	153807242	153810894	96	-	.	Parent=comp163401_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153807436	153807608	.	-	0	Parent=comp163401_c0_seq1.mrna1
Chr1	gffcl	locus	153811444	153811785	.	-	.	ID=RLOC_00012666;geneIDs=comp137587_c0_seq1.path1;transcripts=comp137587_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153811444	153811785	.	-	.	ID=comp137587_c0_seq1.mrna1;geneID=comp137587_c0_seq1.path1;Name=comp137587_c0_seq1;Dir=indeterminatecoverage=74.2;identity=89.1;matches=326;mismatches=10;indels=30;unknowns=0;Target=comp137587_c0_seq1 360 1 .;CDS_Target=comp137587_c0_seq1 168 1 .;locus=RLOC_00012666
Chr1	stalkie_big_nohaplotig	exon	153811444	153811785	89	-	.	Parent=comp137587_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153811620	153811785	.	-	0	Parent=comp137587_c0_seq1.mrna1
Chr1	gffcl	locus	153816186	153852426	.	+	.	ID=RLOC_00012667;geneIDs=FBgn0032979.3.path1,comp148881_c0_seq1.path1,comp158150_c0_seq1.path1;transcripts=comp158150_c0_seq1.mrna1,comp148881_c0_seq1.mrna1,FBgn0032979.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153816186	153819721	.	+	.	ID=comp158150_c0_seq1.mrna1;geneID=comp158150_c0_seq1.path1;Name=comp158150_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=1721;mismatches=44;indels=3;unknowns=0;locus=RLOC_00012667
Chr1	stalkie_big_nohaplotig	exon	153816186	153816682	93	+	.	Parent=comp158150_c0_seq1.mrna1;Target=comp158150_c0_seq1 494 1 .
Chr1	stalkie_big_nohaplotig	exon	153818261	153818860	99	+	.	Parent=comp158150_c0_seq1.mrna1;Target=comp158150_c0_seq1 1094 495 .
Chr1	stalkie_big_nohaplotig	exon	153818928	153819058	100	+	.	Parent=comp158150_c0_seq1.mrna1;Target=comp158150_c0_seq1 1225 1095 .
Chr1	stalkie_big_nohaplotig	exon	153819126	153819320	96	+	.	Parent=comp158150_c0_seq1.mrna1;Target=comp158150_c0_seq1 1420 1226 .
Chr1	stalkie_big_nohaplotig	exon	153819377	153819721	99	+	.	Parent=comp158150_c0_seq1.mrna1;Target=comp158150_c0_seq1 1765 1421 .
Chr1	stalkie_big_nohaplotig	CDS	153818706	153818860	.	+	0	Parent=comp158150_c0_seq1.mrna1;Target=comp158150_c0_seq1 1094 940 .
Chr1	stalkie_big_nohaplotig	CDS	153818928	153819058	.	+	1	Parent=comp158150_c0_seq1.mrna1;Target=comp158150_c0_seq1 1225 1095 .
Chr1	stalkie_big_nohaplotig	CDS	153819126	153819247	.	+	2	Parent=comp158150_c0_seq1.mrna1;Target=comp158150_c0_seq1 1347 1226 .
Chr1	stalkie_big_nohaplotig	mRNA	153817808	153852426	.	+	.	ID=comp148881_c0_seq1.mrna1;geneID=comp148881_c0_seq1.path1;Name=comp148881_c0_seq1;Dir=indeterminatecoverage=96.8;identity=97.8;matches=872;mismatches=4;indels=16;unknowns=0;Target=comp148881_c0_seq1 724 662 .;locus=RLOC_00012667
Chr1	stalkie_big_nohaplotig	exon	153817808	153817817	100	+	.	Parent=comp148881_c0_seq1.mrna1;Target=comp148881_c0_seq1 33 24 .
Chr1	stalkie_big_nohaplotig	exon	153818668	153818673	100	+	.	Parent=comp148881_c0_seq1.mrna1;Target=comp148881_c0_seq1 39 34 .
Chr1	stalkie_big_nohaplotig	exon	153818901	153818902	100	+	.	Parent=comp148881_c0_seq1.mrna1;Target=comp148881_c0_seq1 41 40 .
Chr1	stalkie_big_nohaplotig	exon	153825138	153825149	100	+	.	Parent=comp148881_c0_seq1.mrna1;Target=comp148881_c0_seq1 53 42 .
Chr1	stalkie_big_nohaplotig	exon	153842342	153842349	87	+	.	Parent=comp148881_c0_seq1.mrna1;Target=comp148881_c0_seq1 61 54 .
Chr1	stalkie_big_nohaplotig	exon	153843487	153843492	83	+	.	Parent=comp148881_c0_seq1.mrna1;Target=comp148881_c0_seq1 67 62 .
Chr1	stalkie_big_nohaplotig	exon	153844654	153844656	100	+	.	Parent=comp148881_c0_seq1.mrna1;Target=comp148881_c0_seq1 70 68 .
Chr1	stalkie_big_nohaplotig	exon	153849605	153849612	100	+	.	Parent=comp148881_c0_seq1.mrna1;Target=comp148881_c0_seq1 78 71 .
Chr1	stalkie_big_nohaplotig	exon	153851590	153852426	97	+	.	Parent=comp148881_c0_seq1.mrna1;Target=comp148881_c0_seq1 899 79 .
Chr1	stalkie_big_nohaplotig	CDS	153852185	153852247	.	+	0	Parent=comp148881_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153848548	153850572	.	+	.	ID=FBgn0032979.3.mrna1;geneID=FBgn0032979.3.path1;Name=FBgn0032979.3;Dir=sensecoverage=100.0;identity=98.6;matches=1772;mismatches=25;indels=0;unknowns=0;locus=RLOC_00012667
Chr1	stalkie_big_nohaplotig	exon	153848548	153848937	97	+	.	Parent=FBgn0032979.3.mrna1;Target=FBgn0032979.3 1 390 +
Chr1	stalkie_big_nohaplotig	exon	153848993	153849128	97	+	.	Parent=FBgn0032979.3.mrna1;Target=FBgn0032979.3 391 526 +
Chr1	stalkie_big_nohaplotig	exon	153849183	153849362	98	+	.	Parent=FBgn0032979.3.mrna1;Target=FBgn0032979.3 527 706 +
Chr1	stalkie_big_nohaplotig	exon	153849425	153849799	99	+	.	Parent=FBgn0032979.3.mrna1;Target=FBgn0032979.3 707 1081 +
Chr1	stalkie_big_nohaplotig	exon	153849857	153850572	98	+	.	Parent=FBgn0032979.3.mrna1;Target=FBgn0032979.3 1082 1797 +
Chr1	stalkie_big_nohaplotig	CDS	153848548	153848937	.	+	0	Parent=FBgn0032979.3.mrna1;Target=FBgn0032979.3 1 390 +
Chr1	stalkie_big_nohaplotig	CDS	153848993	153849128	.	+	0	Parent=FBgn0032979.3.mrna1;Target=FBgn0032979.3 391 526 +
Chr1	stalkie_big_nohaplotig	CDS	153849183	153849362	.	+	2	Parent=FBgn0032979.3.mrna1;Target=FBgn0032979.3 527 706 +
Chr1	stalkie_big_nohaplotig	CDS	153849425	153849799	.	+	2	Parent=FBgn0032979.3.mrna1;Target=FBgn0032979.3 707 1081 +
Chr1	stalkie_big_nohaplotig	CDS	153849857	153850572	.	+	2	Parent=FBgn0032979.3.mrna1;Target=FBgn0032979.3 1082 1797 +
Chr1	gffcl	locus	153821171	153823780	.	+	.	ID=RLOC_00012668;geneIDs=FBgn0030086.1.path1;transcripts=FBgn0030086.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153821171	153823780	.	+	.	ID=FBgn0030086.1.mrna1;geneID=FBgn0030086.1.path1;Name=FBgn0030086.1;Dir=sensecoverage=100.0;identity=99.6;matches=1698;mismatches=6;indels=0;unknowns=0;locus=RLOC_00012668
Chr1	stalkie_big_nohaplotig	exon	153821171	153821272	99	+	.	Parent=FBgn0030086.1.mrna1;Target=FBgn0030086.1 1 102 +
Chr1	stalkie_big_nohaplotig	exon	153821887	153822576	99	+	.	Parent=FBgn0030086.1.mrna1;Target=FBgn0030086.1 103 792 +
Chr1	stalkie_big_nohaplotig	exon	153822789	153823416	99	+	.	Parent=FBgn0030086.1.mrna1;Target=FBgn0030086.1 793 1420 +
Chr1	stalkie_big_nohaplotig	exon	153823497	153823780	100	+	.	Parent=FBgn0030086.1.mrna1;Target=FBgn0030086.1 1421 1704 +
Chr1	stalkie_big_nohaplotig	CDS	153821171	153821272	.	+	0	Parent=FBgn0030086.1.mrna1;Target=FBgn0030086.1 1 102 +
Chr1	stalkie_big_nohaplotig	CDS	153821887	153822576	.	+	0	Parent=FBgn0030086.1.mrna1;Target=FBgn0030086.1 103 792 +
Chr1	stalkie_big_nohaplotig	CDS	153822789	153823416	.	+	0	Parent=FBgn0030086.1.mrna1;Target=FBgn0030086.1 793 1420 +
Chr1	stalkie_big_nohaplotig	CDS	153823497	153823780	.	+	2	Parent=FBgn0030086.1.mrna1;Target=FBgn0030086.1 1421 1704 +
Chr1	gffcl	locus	153825769	153845215	.	-	.	ID=RLOC_00012669;geneIDs=FBgn0030087.1.path1,comp147815_c0_seq1.path1,comp157889_c0_seq1.path1,comp160432_c0_seq1.path1;transcripts=FBgn0030087.1.mrna1,comp147815_c0_seq1.mrna1,comp160432_c0_seq1.mrna1,comp157889_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153825769	153845215	.	-	.	ID=FBgn0030087.1.mrna1;geneID=FBgn0030087.1.path1;Name=FBgn0030087.1;Dir=sensecoverage=100.0;identity=99.6;matches=2661;mismatches=10;indels=1;unknowns=16;locus=RLOC_00012669
Chr1	stalkie_big_nohaplotig	exon	153825769	153825871	100	-	.	Parent=FBgn0030087.1.mrna1;Target=FBgn0030087.1 2586 2688 +
Chr1	stalkie_big_nohaplotig	exon	153825945	153826536	99	-	.	Parent=FBgn0030087.1.mrna1;Target=FBgn0030087.1 1994 2585 +
Chr1	stalkie_big_nohaplotig	exon	153826601	153826868	99	-	.	Parent=FBgn0030087.1.mrna1;Target=FBgn0030087.1 1726 1993 +
Chr1	stalkie_big_nohaplotig	exon	153827317	153827400	98	-	.	Parent=FBgn0030087.1.mrna1;Target=FBgn0030087.1 1642 1725 +
Chr1	stalkie_big_nohaplotig	exon	153827465	153827766	99	-	.	Parent=FBgn0030087.1.mrna1;Target=FBgn0030087.1 1340 1641 +
Chr1	stalkie_big_nohaplotig	exon	153838890	153838919	100	-	.	Parent=FBgn0030087.1.mrna1;Target=FBgn0030087.1 1310 1339 +
Chr1	stalkie_big_nohaplotig	exon	153840417	153840584	100	-	.	Parent=FBgn0030087.1.mrna1;Target=FBgn0030087.1 1142 1309 +
Chr1	stalkie_big_nohaplotig	exon	153840803	153841039	100	-	.	Parent=FBgn0030087.1.mrna1;Target=FBgn0030087.1 905 1141 +
Chr1	stalkie_big_nohaplotig	exon	153841610	153841939	99	-	.	Parent=FBgn0030087.1.mrna1;Target=FBgn0030087.1 575 904 +
Chr1	stalkie_big_nohaplotig	exon	153844454	153844598	100	-	.	Parent=FBgn0030087.1.mrna1;Target=FBgn0030087.1 430 574 +
Chr1	stalkie_big_nohaplotig	exon	153844729	153845052	99	-	.	Parent=FBgn0030087.1.mrna1;Target=FBgn0030087.1 105 429 +
Chr1	stalkie_big_nohaplotig	exon	153845112	153845215	100	-	.	Parent=FBgn0030087.1.mrna1;Target=FBgn0030087.1 1 104 +
Chr1	stalkie_big_nohaplotig	CDS	153845033	153845052	.	-	0	Parent=FBgn0030087.1.mrna1;Target=FBgn0030087.1 105 125 +
Chr1	stalkie_big_nohaplotig	CDS	153845112	153845213	.	-	0	Parent=FBgn0030087.1.mrna1;Target=FBgn0030087.1 3 104 +
Chr1	stalkie_big_nohaplotig	mRNA	153827745	153831255	.	-	.	ID=comp147815_c0_seq1.mrna1;geneID=comp147815_c0_seq1.path1;Name=comp147815_c0_seq1;Dir=indeterminatecoverage=46.5;identity=99.7;matches=371;mismatches=0;indels=1;unknowns=0;locus=RLOC_00012669
Chr1	stalkie_big_nohaplotig	exon	153827745	153828109	99	-	.	Parent=comp147815_c0_seq1.mrna1;Target=comp147815_c0_seq1 797 434 .
Chr1	stalkie_big_nohaplotig	exon	153831249	153831255	100	-	.	Parent=comp147815_c0_seq1.mrna1;Target=comp147815_c0_seq1 433 427 .
Chr1	stalkie_big_nohaplotig	CDS	153828004	153828109	.	-	1	Parent=comp147815_c0_seq1.mrna1;Target=comp147815_c0_seq1 539 434 .
Chr1	stalkie_big_nohaplotig	CDS	153831249	153831253	.	-	0	Parent=comp147815_c0_seq1.mrna1;Target=comp147815_c0_seq1 433 429 .
Chr1	stalkie_big_nohaplotig	mRNA	153828727	153838912	.	-	.	ID=comp160432_c0_seq1.mrna1;geneID=comp160432_c0_seq1.path1;Name=comp160432_c0_seq1;Dir=indeterminatecoverage=100.0;identity=89.5;matches=1727;mismatches=72;indels=131;unknowns=0;Target=comp160432_c0_seq1 211 2 .;locus=RLOC_00012669
Chr1	stalkie_big_nohaplotig	exon	153828727	153828777	96	-	.	Parent=comp160432_c0_seq1.mrna1;Target=comp160432_c0_seq1 1974 1924 .
Chr1	stalkie_big_nohaplotig	exon	153828946	153829066	95	-	.	Parent=comp160432_c0_seq1.mrna1;Target=comp160432_c0_seq1 1923 1802 .
Chr1	stalkie_big_nohaplotig	exon	153829149	153829922	80	-	.	Parent=comp160432_c0_seq1.mrna1;Target=comp160432_c0_seq1 1734 887 .
Chr1	stalkie_big_nohaplotig	exon	153838037	153838912	97	-	.	Parent=comp160432_c0_seq1.mrna1;Target=comp160432_c0_seq1 886 1 .
Chr1	stalkie_big_nohaplotig	CDS	153838703	153838911	.	-	0	Parent=comp160432_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153839517	153840440	.	-	.	ID=comp157889_c0_seq1.mrna1;geneID=comp157889_c0_seq1.path1;Name=comp157889_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.1;matches=892;mismatches=31;indels=5;unknowns=0;Target=comp157889_c0_seq1 927 1 .;CDS_Target=comp157889_c0_seq1 715 536 .;locus=RLOC_00012669
Chr1	stalkie_big_nohaplotig	exon	153839517	153840440	96	-	.	Parent=comp157889_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153839725	153839904	.	-	0	Parent=comp157889_c0_seq1.mrna1
Chr1	gffcl	locus	153853617	153863909	.	-	.	ID=RLOC_00012670;geneIDs=FBgn0061200.1.path1;transcripts=FBgn0061200.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153853617	153863909	.	-	.	ID=FBgn0061200.1.mrna1;geneID=FBgn0061200.1.path1;Name=FBgn0061200.1;Dir=sensecoverage=100.0;identity=99.6;matches=5577;mismatches=15;indels=9;unknowns=0;locus=RLOC_00012670
Chr1	stalkie_big_nohaplotig	exon	153853617	153853698	98	-	.	Parent=FBgn0061200.1.mrna1;Target=FBgn0061200.1 5511 5592 +
Chr1	stalkie_big_nohaplotig	exon	153854969	153855048	100	-	.	Parent=FBgn0061200.1.mrna1;Target=FBgn0061200.1 5431 5510 +
Chr1	stalkie_big_nohaplotig	exon	153857406	153857504	100	-	.	Parent=FBgn0061200.1.mrna1;Target=FBgn0061200.1 5332 5430 +
Chr1	stalkie_big_nohaplotig	exon	153857578	153862204	99	-	.	Parent=FBgn0061200.1.mrna1;Target=FBgn0061200.1 714 5331 +
Chr1	stalkie_big_nohaplotig	exon	153863142	153863434	100	-	.	Parent=FBgn0061200.1.mrna1;Target=FBgn0061200.1 421 713 +
Chr1	stalkie_big_nohaplotig	exon	153863490	153863909	99	-	.	Parent=FBgn0061200.1.mrna1;Target=FBgn0061200.1 1 420 +
Chr1	stalkie_big_nohaplotig	CDS	153853617	153853698	.	-	1	Parent=FBgn0061200.1.mrna1;Target=FBgn0061200.1 5511 5592 +
Chr1	stalkie_big_nohaplotig	CDS	153854969	153855048	.	-	0	Parent=FBgn0061200.1.mrna1;Target=FBgn0061200.1 5431 5510 +
Chr1	stalkie_big_nohaplotig	CDS	153857406	153857504	.	-	0	Parent=FBgn0061200.1.mrna1;Target=FBgn0061200.1 5332 5430 +
Chr1	stalkie_big_nohaplotig	CDS	153857578	153862204	.	-	1	Parent=FBgn0061200.1.mrna1;Target=FBgn0061200.1 714 5331 +
Chr1	stalkie_big_nohaplotig	CDS	153863142	153863434	.	-	0	Parent=FBgn0061200.1.mrna1;Target=FBgn0061200.1 421 713 +
Chr1	stalkie_big_nohaplotig	CDS	153863490	153863909	.	-	0	Parent=FBgn0061200.1.mrna1;Target=FBgn0061200.1 1 420 +
Chr1	gffcl	locus	153866488	153867790	.	-	.	ID=RLOC_00012671;geneIDs=comp58016_c0_seq1.path1,comp153169_c0_seq1.path1;transcripts=comp58016_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153867052	153867790	.	-	.	ID=comp58016_c0_seq1.mrna1;geneID=comp58016_c0_seq1.path1;Name=comp58016_c0_seq1;Dir=antisensecoverage=51.1;identity=99.5;matches=586;mismatches=3;indels=0;unknowns=0;Target=comp58016_c0_seq1 658 882 .;locus=RLOC_00012671
Chr1	stalkie_big_nohaplotig	exon	153867052	153867378	99	-	.	Parent=comp58016_c0_seq1.mrna1;Target=comp58016_c0_seq1 564 890 -
Chr1	stalkie_big_nohaplotig	exon	153867433	153867591	99	-	.	Parent=comp58016_c0_seq1.mrna1;Target=comp58016_c0_seq1 891 1049 -
Chr1	stalkie_big_nohaplotig	exon	153867688	153867790	99	-	.	Parent=comp58016_c0_seq1.mrna1;Target=comp58016_c0_seq1 1050 1152 -
Chr1	stalkie_big_nohaplotig	CDS	153867146	153867370	.	-	0	Parent=comp58016_c0_seq1.mrna1
Chr1	gffcl	locus	153868750	153870284	.	-	.	ID=RLOC_00012672;geneIDs=FBgn0030096.1.path1;transcripts=FBgn0030096.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153868750	153870284	.	-	.	ID=FBgn0030096.1.mrna1;geneID=FBgn0030096.1.path1;Name=FBgn0030096.1;Dir=sensecoverage=100.0;identity=98.5;matches=1383;mismatches=21;indels=0;unknowns=0;locus=RLOC_00012672
Chr1	stalkie_big_nohaplotig	exon	153868750	153869477	98	-	.	Parent=FBgn0030096.1.mrna1;Target=FBgn0030096.1 677 1404 +
Chr1	stalkie_big_nohaplotig	exon	153869535	153869940	97	-	.	Parent=FBgn0030096.1.mrna1;Target=FBgn0030096.1 271 676 +
Chr1	stalkie_big_nohaplotig	exon	153870015	153870284	99	-	.	Parent=FBgn0030096.1.mrna1;Target=FBgn0030096.1 1 270 +
Chr1	stalkie_big_nohaplotig	CDS	153868750	153869477	.	-	2	Parent=FBgn0030096.1.mrna1;Target=FBgn0030096.1 677 1404 +
Chr1	stalkie_big_nohaplotig	CDS	153869535	153869940	.	-	0	Parent=FBgn0030096.1.mrna1;Target=FBgn0030096.1 271 676 +
Chr1	stalkie_big_nohaplotig	CDS	153870015	153870284	.	-	0	Parent=FBgn0030096.1.mrna1;Target=FBgn0030096.1 1 270 +
Chr1	gffcl	locus	153876379	153883141	.	+	.	ID=RLOC_00012674;geneIDs=FBgn0051755.2.path1;transcripts=FBgn0051755.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153876379	153883141	.	+	.	ID=FBgn0051755.2.mrna1;geneID=FBgn0051755.2.path1;Name=FBgn0051755.2;Dir=sensecoverage=100.0;identity=99.7;matches=4387;mismatches=14;indels=0;unknowns=0;locus=RLOC_00012674
Chr1	stalkie_big_nohaplotig	exon	153876379	153876455	98	+	.	Parent=FBgn0051755.2.mrna1;Target=FBgn0051755.2 1 77 +
Chr1	stalkie_big_nohaplotig	exon	153876512	153876703	98	+	.	Parent=FBgn0051755.2.mrna1;Target=FBgn0051755.2 78 269 +
Chr1	stalkie_big_nohaplotig	exon	153876760	153876822	98	+	.	Parent=FBgn0051755.2.mrna1;Target=FBgn0051755.2 270 332 +
Chr1	stalkie_big_nohaplotig	exon	153878128	153879487	99	+	.	Parent=FBgn0051755.2.mrna1;Target=FBgn0051755.2 333 1692 +
Chr1	stalkie_big_nohaplotig	exon	153879542	153880027	100	+	.	Parent=FBgn0051755.2.mrna1;Target=FBgn0051755.2 1693 2178 +
Chr1	stalkie_big_nohaplotig	exon	153880844	153881707	100	+	.	Parent=FBgn0051755.2.mrna1;Target=FBgn0051755.2 2179 3042 +
Chr1	stalkie_big_nohaplotig	exon	153881783	153883141	99	+	.	Parent=FBgn0051755.2.mrna1;Target=FBgn0051755.2 3043 4401 +
Chr1	stalkie_big_nohaplotig	CDS	153876379	153876455	.	+	0	Parent=FBgn0051755.2.mrna1;Target=FBgn0051755.2 1 77 +
Chr1	stalkie_big_nohaplotig	CDS	153876512	153876703	.	+	1	Parent=FBgn0051755.2.mrna1;Target=FBgn0051755.2 78 269 +
Chr1	stalkie_big_nohaplotig	CDS	153876760	153876822	.	+	1	Parent=FBgn0051755.2.mrna1;Target=FBgn0051755.2 270 332 +
Chr1	stalkie_big_nohaplotig	CDS	153878128	153879487	.	+	1	Parent=FBgn0051755.2.mrna1;Target=FBgn0051755.2 333 1692 +
Chr1	stalkie_big_nohaplotig	CDS	153879542	153880027	.	+	0	Parent=FBgn0051755.2.mrna1;Target=FBgn0051755.2 1693 2178 +
Chr1	stalkie_big_nohaplotig	CDS	153880844	153881707	.	+	0	Parent=FBgn0051755.2.mrna1;Target=FBgn0051755.2 2179 3042 +
Chr1	stalkie_big_nohaplotig	CDS	153881783	153883141	.	+	0	Parent=FBgn0051755.2.mrna1;Target=FBgn0051755.2 3043 4401 +
Chr1	gffcl	locus	153886462	153889079	.	-	.	ID=RLOC_00012675;geneIDs=FBgn0000927.1.path1;transcripts=FBgn0000927.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153886462	153889079	.	-	.	ID=FBgn0000927.1.mrna1;geneID=FBgn0000927.1.path1;Name=FBgn0000927.1;Dir=sensecoverage=100.0;identity=99.2;matches=2170;mismatches=17;indels=0;unknowns=0;locus=RLOC_00012675
Chr1	stalkie_big_nohaplotig	exon	153886462	153886667	98	-	.	Parent=FBgn0000927.1.mrna1;Target=FBgn0000927.1 1982 2187 +
Chr1	stalkie_big_nohaplotig	exon	153886726	153887703	99	-	.	Parent=FBgn0000927.1.mrna1;Target=FBgn0000927.1 1004 1981 +
Chr1	stalkie_big_nohaplotig	exon	153887879	153888027	100	-	.	Parent=FBgn0000927.1.mrna1;Target=FBgn0000927.1 855 1003 +
Chr1	stalkie_big_nohaplotig	exon	153888094	153888605	99	-	.	Parent=FBgn0000927.1.mrna1;Target=FBgn0000927.1 343 854 +
Chr1	stalkie_big_nohaplotig	exon	153888662	153888913	99	-	.	Parent=FBgn0000927.1.mrna1;Target=FBgn0000927.1 91 342 +
Chr1	stalkie_big_nohaplotig	exon	153888990	153889079	96	-	.	Parent=FBgn0000927.1.mrna1;Target=FBgn0000927.1 1 90 +
Chr1	stalkie_big_nohaplotig	CDS	153886462	153886667	.	-	2	Parent=FBgn0000927.1.mrna1;Target=FBgn0000927.1 1982 2187 +
Chr1	stalkie_big_nohaplotig	CDS	153886726	153887703	.	-	2	Parent=FBgn0000927.1.mrna1;Target=FBgn0000927.1 1004 1981 +
Chr1	stalkie_big_nohaplotig	CDS	153887879	153888027	.	-	1	Parent=FBgn0000927.1.mrna1;Target=FBgn0000927.1 855 1003 +
Chr1	stalkie_big_nohaplotig	CDS	153888094	153888605	.	-	0	Parent=FBgn0000927.1.mrna1;Target=FBgn0000927.1 343 854 +
Chr1	stalkie_big_nohaplotig	CDS	153888662	153888913	.	-	0	Parent=FBgn0000927.1.mrna1;Target=FBgn0000927.1 91 342 +
Chr1	stalkie_big_nohaplotig	CDS	153888990	153889007	.	-	0	Parent=FBgn0000927.1.mrna1;Target=FBgn0000927.1 73 90 +
Chr1	gffcl	locus	153889533	153891363	.	+	.	ID=RLOC_00012676;geneIDs=FBgn0004856.1.path1;transcripts=FBgn0004856.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153889533	153891363	.	+	.	ID=FBgn0004856.1.mrna1;geneID=FBgn0004856.1.path1;Name=FBgn0004856.1;Dir=sensecoverage=100.0;identity=99.3;matches=1618;mismatches=11;indels=0;unknowns=0;locus=RLOC_00012676
Chr1	stalkie_big_nohaplotig	exon	153889533	153889547	100	+	.	Parent=FBgn0004856.1.mrna1;Target=FBgn0004856.1 1 15 +
Chr1	stalkie_big_nohaplotig	exon	153889621	153889840	98	+	.	Parent=FBgn0004856.1.mrna1;Target=FBgn0004856.1 16 235 +
Chr1	stalkie_big_nohaplotig	exon	153889907	153890467	99	+	.	Parent=FBgn0004856.1.mrna1;Target=FBgn0004856.1 236 796 +
Chr1	stalkie_big_nohaplotig	exon	153890531	153891363	99	+	.	Parent=FBgn0004856.1.mrna1;Target=FBgn0004856.1 797 1629 +
Chr1	stalkie_big_nohaplotig	CDS	153889533	153889547	.	+	0	Parent=FBgn0004856.1.mrna1;Target=FBgn0004856.1 1 15 +
Chr1	stalkie_big_nohaplotig	CDS	153889621	153889840	.	+	0	Parent=FBgn0004856.1.mrna1;Target=FBgn0004856.1 16 235 +
Chr1	stalkie_big_nohaplotig	CDS	153889907	153890467	.	+	2	Parent=FBgn0004856.1.mrna1;Target=FBgn0004856.1 236 796 +
Chr1	stalkie_big_nohaplotig	CDS	153890531	153891363	.	+	2	Parent=FBgn0004856.1.mrna1;Target=FBgn0004856.1 797 1629 +
Chr1	gffcl	locus	153892983	153895986	.	+	.	ID=RLOC_00012677;geneIDs=FBgn0026679.1.path1;transcripts=FBgn0026679.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153892983	153895986	.	+	.	ID=FBgn0026679.1.mrna1;geneID=FBgn0026679.1.path1;Name=FBgn0026679.1;Dir=sensecoverage=100.0;identity=99.3;matches=2807;mismatches=19;indels=0;unknowns=0;locus=RLOC_00012677
Chr1	stalkie_big_nohaplotig	exon	153892983	153893723	99	+	.	Parent=FBgn0026679.1.mrna1;Target=FBgn0026679.1 1 741 +
Chr1	stalkie_big_nohaplotig	exon	153893788	153893964	98	+	.	Parent=FBgn0026679.1.mrna1;Target=FBgn0026679.1 742 918 +
Chr1	stalkie_big_nohaplotig	exon	153894016	153895029	99	+	.	Parent=FBgn0026679.1.mrna1;Target=FBgn0026679.1 919 1932 +
Chr1	stalkie_big_nohaplotig	exon	153895093	153895986	99	+	.	Parent=FBgn0026679.1.mrna1;Target=FBgn0026679.1 1933 2826 +
Chr1	stalkie_big_nohaplotig	CDS	153892983	153893723	.	+	0	Parent=FBgn0026679.1.mrna1;Target=FBgn0026679.1 1 741 +
Chr1	stalkie_big_nohaplotig	CDS	153893788	153893964	.	+	0	Parent=FBgn0026679.1.mrna1;Target=FBgn0026679.1 742 918 +
Chr1	stalkie_big_nohaplotig	CDS	153894016	153895029	.	+	0	Parent=FBgn0026679.1.mrna1;Target=FBgn0026679.1 919 1932 +
Chr1	stalkie_big_nohaplotig	CDS	153895093	153895986	.	+	0	Parent=FBgn0026679.1.mrna1;Target=FBgn0026679.1 1933 2826 +
Chr1	gffcl	locus	153896618	153911752	.	.	.	ID=RLOC_00012678;geneIDs=FBgn0030790.1.path1,comp154141_c0_seq1.path1,comp161978_c0_seq1.path1;transcripts=comp161978_c0_seq1.mrna1,comp154141_c0_seq1.mrna1,FBgn0030790.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153896618	153897533	.	-	.	ID=comp161978_c0_seq1.mrna1;geneID=comp161978_c0_seq1.path1;Name=comp161978_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=900;mismatches=16;indels=13;unknowns=0;Target=comp161978_c0_seq1 929 1 .;CDS_Target=comp161978_c0_seq1 779 702 .;locus=RLOC_00012678
Chr1	stalkie_big_nohaplotig	exon	153896618	153897533	96	-	.	Parent=comp161978_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153896768	153896841	.	-	0	Parent=comp161978_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153896796	153911752	.	+	.	ID=comp154141_c0_seq1.mrna1;geneID=comp154141_c0_seq1.path1;Name=comp154141_c0_seq1;Dir=indeterminatecoverage=78.9;identity=93.2;matches=659;mismatches=22;indels=26;unknowns=0;Target=comp154141_c0_seq1 870 745 .;locus=RLOC_00012678
Chr1	stalkie_big_nohaplotig	exon	153896796	153896799	100	+	.	Parent=comp154141_c0_seq1.mrna1;Target=comp154141_c0_seq1 179 176 .
Chr1	stalkie_big_nohaplotig	exon	153901011	153901023	84	+	.	Parent=comp154141_c0_seq1.mrna1;Target=comp154141_c0_seq1 192 180 .
Chr1	stalkie_big_nohaplotig	exon	153903282	153903313	65	+	.	Parent=comp154141_c0_seq1.mrna1;Target=comp154141_c0_seq1 214 193 .
Chr1	stalkie_big_nohaplotig	exon	153911109	153911752	94	+	.	Parent=comp154141_c0_seq1.mrna1;Target=comp154141_c0_seq1 870 215 .
Chr1	stalkie_big_nohaplotig	CDS	153911627	153911752	.	+	0	Parent=comp154141_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153900996	153906184	.	+	.	ID=FBgn0030790.1.mrna1;geneID=FBgn0030790.1.path1;Name=FBgn0030790.1;Dir=sensecoverage=100.0;identity=99.9;matches=797;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012678
Chr1	stalkie_big_nohaplotig	exon	153900996	153901230	100	+	.	Parent=FBgn0030790.1.mrna1;Target=FBgn0030790.1 1 235 +
Chr1	stalkie_big_nohaplotig	exon	153905001	153905087	100	+	.	Parent=FBgn0030790.1.mrna1;Target=FBgn0030790.1 236 322 +
Chr1	stalkie_big_nohaplotig	exon	153905155	153905338	100	+	.	Parent=FBgn0030790.1.mrna1;Target=FBgn0030790.1 323 506 +
Chr1	stalkie_big_nohaplotig	exon	153905408	153905578	100	+	.	Parent=FBgn0030790.1.mrna1;Target=FBgn0030790.1 507 677 +
Chr1	stalkie_big_nohaplotig	exon	153906064	153906184	99	+	.	Parent=FBgn0030790.1.mrna1;Target=FBgn0030790.1 678 798 +
Chr1	stalkie_big_nohaplotig	CDS	153900996	153901230	.	+	0	Parent=FBgn0030790.1.mrna1;Target=FBgn0030790.1 1 235 +
Chr1	stalkie_big_nohaplotig	CDS	153905001	153905087	.	+	2	Parent=FBgn0030790.1.mrna1;Target=FBgn0030790.1 236 322 +
Chr1	stalkie_big_nohaplotig	CDS	153905155	153905338	.	+	2	Parent=FBgn0030790.1.mrna1;Target=FBgn0030790.1 323 506 +
Chr1	stalkie_big_nohaplotig	CDS	153905408	153905578	.	+	1	Parent=FBgn0030790.1.mrna1;Target=FBgn0030790.1 507 677 +
Chr1	stalkie_big_nohaplotig	CDS	153906064	153906184	.	+	1	Parent=FBgn0030790.1.mrna1;Target=FBgn0030790.1 678 798 +
Chr1	gffcl	locus	153897597	153898743	.	-	.	ID=RLOC_00012679;geneIDs=comp156332_c0_seq1.path1;transcripts=comp156332_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153897597	153898743	.	-	.	ID=comp156332_c0_seq1.mrna1;geneID=comp156332_c0_seq1.path1;Name=comp156332_c0_seq1;Dir=sensecoverage=100.0;identity=98.6;matches=1034;mismatches=10;indels=5;unknowns=0;Target=comp156332_c0_seq1 920 1021 +;locus=RLOC_00012679
Chr1	stalkie_big_nohaplotig	exon	153897597	153898434	98	-	.	Parent=comp156332_c0_seq1.mrna1;Target=comp156332_c0_seq1 212 1044 +
Chr1	stalkie_big_nohaplotig	exon	153898533	153898743	99	-	.	Parent=comp156332_c0_seq1.mrna1;Target=comp156332_c0_seq1 1 211 +
Chr1	stalkie_big_nohaplotig	CDS	153897620	153897721	.	-	0	Parent=comp156332_c0_seq1.mrna1
Chr1	gffcl	locus	153911966	153929182	.	-	.	ID=RLOC_00012680;geneIDs=FBgn0086367.1.path1,comp159786_c0_seq1.path1;transcripts=FBgn0086367.1.mrna1,comp159786_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153911966	153929182	.	-	.	ID=FBgn0086367.1.mrna1;geneID=FBgn0086367.1.path1;Name=FBgn0086367.1;Dir=sensecoverage=100.0;identity=99.4;matches=1235;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012680
Chr1	stalkie_big_nohaplotig	exon	153911966	153912260	100	-	.	Parent=FBgn0086367.1.mrna1;Target=FBgn0086367.1 948 1242 +
Chr1	stalkie_big_nohaplotig	exon	153912316	153912432	99	-	.	Parent=FBgn0086367.1.mrna1;Target=FBgn0086367.1 831 947 +
Chr1	stalkie_big_nohaplotig	exon	153912489	153912609	99	-	.	Parent=FBgn0086367.1.mrna1;Target=FBgn0086367.1 710 830 +
Chr1	stalkie_big_nohaplotig	exon	153912689	153912795	98	-	.	Parent=FBgn0086367.1.mrna1;Target=FBgn0086367.1 603 709 +
Chr1	stalkie_big_nohaplotig	exon	153913942	153914069	99	-	.	Parent=FBgn0086367.1.mrna1;Target=FBgn0086367.1 475 602 +
Chr1	stalkie_big_nohaplotig	exon	153914137	153914244	100	-	.	Parent=FBgn0086367.1.mrna1;Target=FBgn0086367.1 367 474 +
Chr1	stalkie_big_nohaplotig	exon	153918727	153918830	100	-	.	Parent=FBgn0086367.1.mrna1;Target=FBgn0086367.1 263 366 +
Chr1	stalkie_big_nohaplotig	exon	153918919	153919012	100	-	.	Parent=FBgn0086367.1.mrna1;Target=FBgn0086367.1 169 262 +
Chr1	stalkie_big_nohaplotig	exon	153929015	153929182	98	-	.	Parent=FBgn0086367.1.mrna1;Target=FBgn0086367.1 1 168 +
Chr1	stalkie_big_nohaplotig	CDS	153911966	153912260	.	-	1	Parent=FBgn0086367.1.mrna1;Target=FBgn0086367.1 948 1242 +
Chr1	stalkie_big_nohaplotig	CDS	153912316	153912432	.	-	1	Parent=FBgn0086367.1.mrna1;Target=FBgn0086367.1 831 947 +
Chr1	stalkie_big_nohaplotig	CDS	153912489	153912609	.	-	2	Parent=FBgn0086367.1.mrna1;Target=FBgn0086367.1 710 830 +
Chr1	stalkie_big_nohaplotig	CDS	153912689	153912795	.	-	1	Parent=FBgn0086367.1.mrna1;Target=FBgn0086367.1 603 709 +
Chr1	stalkie_big_nohaplotig	CDS	153913942	153914069	.	-	0	Parent=FBgn0086367.1.mrna1;Target=FBgn0086367.1 475 602 +
Chr1	stalkie_big_nohaplotig	CDS	153914137	153914244	.	-	0	Parent=FBgn0086367.1.mrna1;Target=FBgn0086367.1 367 474 +
Chr1	stalkie_big_nohaplotig	CDS	153918727	153918830	.	-	2	Parent=FBgn0086367.1.mrna1;Target=FBgn0086367.1 263 366 +
Chr1	stalkie_big_nohaplotig	CDS	153918919	153919012	.	-	0	Parent=FBgn0086367.1.mrna1;Target=FBgn0086367.1 169 262 +
Chr1	stalkie_big_nohaplotig	CDS	153929015	153929182	.	-	0	Parent=FBgn0086367.1.mrna1;Target=FBgn0086367.1 1 168 +
Chr1	stalkie_big_nohaplotig	mRNA	153912773	153913584	.	-	.	ID=comp159786_c0_seq1.mrna1;geneID=comp159786_c0_seq1.path1;Name=comp159786_c0_seq1;Dir=indeterminatecoverage=66.4;identity=95.1;matches=783;mismatches=29;indels=11;unknowns=0;Target=comp159786_c0_seq1 1240 418 .;CDS_Target=comp159786_c0_seq1 503 420 .;locus=RLOC_00012680
Chr1	stalkie_big_nohaplotig	exon	153912773	153913584	95	-	.	Parent=comp159786_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	153913500	153913582	.	-	0	Parent=comp159786_c0_seq1.mrna1
Chr1	gffcl	locus	153936950	153941928	.	-	.	ID=RLOC_00012681;geneIDs=comp156719_c0_seq1.path1;transcripts=comp156719_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153936950	153941928	.	-	.	ID=comp156719_c0_seq1.mrna1;geneID=comp156719_c0_seq1.path1;Name=comp156719_c0_seq1;Dir=sensecoverage=100.0;identity=98.7;matches=780;mismatches=9;indels=1;unknowns=0;Target=comp156719_c0_seq1 2 40 +;locus=RLOC_00012681
Chr1	stalkie_big_nohaplotig	exon	153936950	153937350	99	-	.	Parent=comp156719_c0_seq1.mrna1;Target=comp156719_c0_seq1 389 790 +
Chr1	stalkie_big_nohaplotig	exon	153938317	153938406	100	-	.	Parent=comp156719_c0_seq1.mrna1;Target=comp156719_c0_seq1 299 388 +
Chr1	stalkie_big_nohaplotig	exon	153938466	153938534	98	-	.	Parent=comp156719_c0_seq1.mrna1;Target=comp156719_c0_seq1 230 298 +
Chr1	stalkie_big_nohaplotig	exon	153941645	153941718	100	-	.	Parent=comp156719_c0_seq1.mrna1;Target=comp156719_c0_seq1 156 229 +
Chr1	stalkie_big_nohaplotig	exon	153941774	153941928	96	-	.	Parent=comp156719_c0_seq1.mrna1;Target=comp156719_c0_seq1 1 155 +
Chr1	stalkie_big_nohaplotig	CDS	153941889	153941927	.	-	0	Parent=comp156719_c0_seq1.mrna1
Chr1	gffcl	locus	153950489	153953251	.	-	.	ID=RLOC_00012682;geneIDs=FBgn0030109.1.path1;transcripts=FBgn0030109.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153950489	153953251	.	-	.	ID=FBgn0030109.1.mrna1;geneID=FBgn0030109.1.path1;Name=FBgn0030109.1;Dir=sensecoverage=100.0;identity=99.2;matches=1928;mismatches=16;indels=0;unknowns=0;locus=RLOC_00012682
Chr1	stalkie_big_nohaplotig	exon	153950489	153951064	99	-	.	Parent=FBgn0030109.1.mrna1;Target=FBgn0030109.1 1369 1944 +
Chr1	stalkie_big_nohaplotig	exon	153951133	153951250	99	-	.	Parent=FBgn0030109.1.mrna1;Target=FBgn0030109.1 1251 1368 +
Chr1	stalkie_big_nohaplotig	exon	153951310	153951459	99	-	.	Parent=FBgn0030109.1.mrna1;Target=FBgn0030109.1 1101 1250 +
Chr1	stalkie_big_nohaplotig	exon	153951581	153951714	99	-	.	Parent=FBgn0030109.1.mrna1;Target=FBgn0030109.1 967 1100 +
Chr1	stalkie_big_nohaplotig	exon	153951829	153951927	98	-	.	Parent=FBgn0030109.1.mrna1;Target=FBgn0030109.1 868 966 +
Chr1	stalkie_big_nohaplotig	exon	153952214	153952691	99	-	.	Parent=FBgn0030109.1.mrna1;Target=FBgn0030109.1 390 867 +
Chr1	stalkie_big_nohaplotig	exon	153952743	153952888	97	-	.	Parent=FBgn0030109.1.mrna1;Target=FBgn0030109.1 244 389 +
Chr1	stalkie_big_nohaplotig	exon	153952944	153953054	98	-	.	Parent=FBgn0030109.1.mrna1;Target=FBgn0030109.1 133 243 +
Chr1	stalkie_big_nohaplotig	exon	153953120	153953251	100	-	.	Parent=FBgn0030109.1.mrna1;Target=FBgn0030109.1 1 132 +
Chr1	stalkie_big_nohaplotig	CDS	153950489	153951064	.	-	0	Parent=FBgn0030109.1.mrna1;Target=FBgn0030109.1 1369 1944 +
Chr1	stalkie_big_nohaplotig	CDS	153951133	153951250	.	-	1	Parent=FBgn0030109.1.mrna1;Target=FBgn0030109.1 1251 1368 +
Chr1	stalkie_big_nohaplotig	CDS	153951310	153951459	.	-	1	Parent=FBgn0030109.1.mrna1;Target=FBgn0030109.1 1101 1250 +
Chr1	stalkie_big_nohaplotig	CDS	153951581	153951714	.	-	0	Parent=FBgn0030109.1.mrna1;Target=FBgn0030109.1 967 1100 +
Chr1	stalkie_big_nohaplotig	CDS	153951829	153951927	.	-	0	Parent=FBgn0030109.1.mrna1;Target=FBgn0030109.1 868 966 +
Chr1	stalkie_big_nohaplotig	CDS	153952214	153952691	.	-	1	Parent=FBgn0030109.1.mrna1;Target=FBgn0030109.1 390 867 +
Chr1	stalkie_big_nohaplotig	CDS	153952743	153952888	.	-	0	Parent=FBgn0030109.1.mrna1;Target=FBgn0030109.1 244 389 +
Chr1	stalkie_big_nohaplotig	CDS	153952944	153953054	.	-	0	Parent=FBgn0030109.1.mrna1;Target=FBgn0030109.1 133 243 +
Chr1	stalkie_big_nohaplotig	CDS	153953120	153953251	.	-	0	Parent=FBgn0030109.1.mrna1;Target=FBgn0030109.1 1 132 +
Chr1	gffcl	locus	153956781	153957796	.	-	.	ID=RLOC_00012683;geneIDs=comp152658_c0_seq1.path1;transcripts=comp152658_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153956781	153957796	.	-	.	ID=comp152658_c0_seq1.mrna1;geneID=comp152658_c0_seq1.path1;Name=comp152658_c0_seq1;Dir=sensecoverage=100.0;identity=94.2;matches=861;mismatches=16;indels=37;unknowns=0;locus=RLOC_00012683
Chr1	stalkie_big_nohaplotig	exon	153956781	153956961	97	-	.	Parent=comp152658_c0_seq1.mrna1;Target=comp152658_c0_seq1 732 912 +
Chr1	stalkie_big_nohaplotig	exon	153957028	153957494	91	-	.	Parent=comp152658_c0_seq1.mrna1;Target=comp152658_c0_seq1 230 731 +
Chr1	stalkie_big_nohaplotig	exon	153957566	153957796	98	-	.	Parent=comp152658_c0_seq1.mrna1;Target=comp152658_c0_seq1 1 229 +
Chr1	stalkie_big_nohaplotig	CDS	153957289	153957494	.	-	2	Parent=comp152658_c0_seq1.mrna1;Target=comp152658_c0_seq1 230 435 +
Chr1	stalkie_big_nohaplotig	CDS	153957566	153957629	.	-	0	Parent=comp152658_c0_seq1.mrna1;Target=comp152658_c0_seq1 166 229 +
Chr1	gffcl	locus	153959629	153960328	.	+	.	ID=RLOC_00012684;geneIDs=comp150666_c0_seq1.path1;transcripts=comp150666_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153959629	153960328	.	+	.	ID=comp150666_c0_seq1.mrna1;geneID=comp150666_c0_seq1.path1;Name=comp150666_c0_seq1;Dir=antisensecoverage=94.7;identity=97.9;matches=592;mismatches=12;indels=1;unknowns=0;locus=RLOC_00012684
Chr1	stalkie_big_nohaplotig	exon	153959629	153959777	96	+	.	Parent=comp150666_c0_seq1.mrna1;Target=comp150666_c0_seq1 462 611 -
Chr1	stalkie_big_nohaplotig	exon	153959874	153960328	98	+	.	Parent=comp150666_c0_seq1.mrna1;Target=comp150666_c0_seq1 7 461 -
Chr1	stalkie_big_nohaplotig	CDS	153959717	153959777	.	+	0	Parent=comp150666_c0_seq1.mrna1;Target=comp150666_c0_seq1 462 522 .
Chr1	stalkie_big_nohaplotig	CDS	153959874	153960064	.	+	2	Parent=comp150666_c0_seq1.mrna1;Target=comp150666_c0_seq1 271 461 .
Chr1	gffcl	locus	153960350	153961643	.	.	.	ID=RLOC_00012685;geneIDs=comp113782_c0_seq1.path1,comp151441_c0_seq1.path1;transcripts=comp151441_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153960350	153960889	.	-	.	ID=comp151441_c0_seq1.mrna1;geneID=comp151441_c0_seq1.path1;Name=comp151441_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=408;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012685
Chr1	stalkie_big_nohaplotig	exon	153960350	153960521	98	-	.	Parent=comp151441_c0_seq1.mrna1;Target=comp151441_c0_seq1 240 411 +
Chr1	stalkie_big_nohaplotig	exon	153960588	153960767	99	-	.	Parent=comp151441_c0_seq1.mrna1;Target=comp151441_c0_seq1 60 239 +
Chr1	stalkie_big_nohaplotig	exon	153960831	153960889	100	-	.	Parent=comp151441_c0_seq1.mrna1;Target=comp151441_c0_seq1 1 59 +
Chr1	stalkie_big_nohaplotig	CDS	153960355	153960521	.	-	2	Parent=comp151441_c0_seq1.mrna1;Target=comp151441_c0_seq1 240 406 +
Chr1	stalkie_big_nohaplotig	CDS	153960588	153960767	.	-	2	Parent=comp151441_c0_seq1.mrna1;Target=comp151441_c0_seq1 60 239 +
Chr1	stalkie_big_nohaplotig	CDS	153960831	153960888	.	-	0	Parent=comp151441_c0_seq1.mrna1;Target=comp151441_c0_seq1 2 59 +
Chr1	gffcl	locus	153963748	153964360	.	+	.	ID=RLOC_00012686;geneIDs=comp143627_c0_seq1.path1;transcripts=comp143627_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153963748	153964360	.	+	.	ID=comp143627_c0_seq1.mrna1;geneID=comp143627_c0_seq1.path1;Name=comp143627_c0_seq1;Dir=antisensecoverage=89.9;identity=97.7;matches=381;mismatches=8;indels=1;unknowns=0;locus=RLOC_00012686
Chr1	stalkie_big_nohaplotig	exon	153963748	153963846	98	+	.	Parent=comp143627_c0_seq1.mrna1;Target=comp143627_c0_seq1 291 390 -
Chr1	stalkie_big_nohaplotig	exon	153964071	153964360	97	+	.	Parent=comp143627_c0_seq1.mrna1;Target=comp143627_c0_seq1 1 290 -
Chr1	stalkie_big_nohaplotig	CDS	153963786	153963846	.	+	0	Parent=comp143627_c0_seq1.mrna1;Target=comp143627_c0_seq1 291 351 .
Chr1	stalkie_big_nohaplotig	CDS	153964071	153964255	.	+	2	Parent=comp143627_c0_seq1.mrna1;Target=comp143627_c0_seq1 106 290 .
Chr1	gffcl	locus	153964041	154053598	.	+	.	ID=RLOC_00012687;geneIDs=comp148010_c0_seq1.path1;transcripts=comp148010_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153964041	154053598	.	+	.	ID=comp148010_c0_seq1.mrna1;geneID=comp148010_c0_seq1.path1;Name=comp148010_c0_seq1;Dir=indeterminatecoverage=90.1;identity=100.0;matches=228;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012687
Chr1	stalkie_big_nohaplotig	exon	153964041	153964048	100	+	.	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 33 26 .
Chr1	stalkie_big_nohaplotig	exon	153973751	153973756	100	+	.	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 39 34 .
Chr1	stalkie_big_nohaplotig	exon	153978830	153978838	100	+	.	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 48 40 .
Chr1	stalkie_big_nohaplotig	exon	153984496	153984499	100	+	.	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 52 49 .
Chr1	stalkie_big_nohaplotig	exon	153991623	153991628	100	+	.	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 58 53 .
Chr1	stalkie_big_nohaplotig	exon	153994412	153994419	100	+	.	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 66 59 .
Chr1	stalkie_big_nohaplotig	exon	153995214	153995215	100	+	.	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 68 67 .
Chr1	stalkie_big_nohaplotig	exon	153995435	153995443	100	+	.	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 77 69 .
Chr1	stalkie_big_nohaplotig	exon	153996043	153996045	100	+	.	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 80 78 .
Chr1	stalkie_big_nohaplotig	exon	153998714	153998720	100	+	.	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 87 81 .
Chr1	stalkie_big_nohaplotig	exon	154006486	154006487	100	+	.	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 89 88 .
Chr1	stalkie_big_nohaplotig	exon	154020375	154020377	100	+	.	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 92 90 .
Chr1	stalkie_big_nohaplotig	exon	154024072	154024073	100	+	.	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 94 93 .
Chr1	stalkie_big_nohaplotig	exon	154031389	154031390	100	+	.	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 96 95 .
Chr1	stalkie_big_nohaplotig	exon	154053442	154053598	100	+	.	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 253 97 .
Chr1	stalkie_big_nohaplotig	CDS	153964041	153964048	.	+	0	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 33 26 .
Chr1	stalkie_big_nohaplotig	CDS	153973751	153973756	.	+	1	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 39 34 .
Chr1	stalkie_big_nohaplotig	CDS	153978830	153978838	.	+	1	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 48 40 .
Chr1	stalkie_big_nohaplotig	CDS	153984496	153984499	.	+	1	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 52 49 .
Chr1	stalkie_big_nohaplotig	CDS	153991623	153991628	.	+	0	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 58 53 .
Chr1	stalkie_big_nohaplotig	CDS	153994412	153994419	.	+	0	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 66 59 .
Chr1	stalkie_big_nohaplotig	CDS	153995214	153995215	.	+	1	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 68 67 .
Chr1	stalkie_big_nohaplotig	CDS	153995435	153995443	.	+	2	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 77 69 .
Chr1	stalkie_big_nohaplotig	CDS	153996043	153996045	.	+	2	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 80 78 .
Chr1	stalkie_big_nohaplotig	CDS	153998714	153998720	.	+	2	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 87 81 .
Chr1	stalkie_big_nohaplotig	CDS	154006486	154006487	.	+	1	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 89 88 .
Chr1	stalkie_big_nohaplotig	CDS	154020375	154020377	.	+	2	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 92 90 .
Chr1	stalkie_big_nohaplotig	CDS	154024072	154024073	.	+	2	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 94 93 .
Chr1	stalkie_big_nohaplotig	CDS	154031389	154031390	.	+	0	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 96 95 .
Chr1	stalkie_big_nohaplotig	CDS	154053442	154053445	.	+	1	Parent=comp148010_c0_seq1.mrna1;Target=comp148010_c0_seq1 100 97 .
Chr1	gffcl	locus	153994214	155938764	.	-	.	ID=RLOC_00012688;geneIDs=comp166262_c0_seq1.path1;transcripts=comp166262_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	153994214	155938764	.	-	.	ID=comp166262_c0_seq1.mrna1;geneID=comp166262_c0_seq1.path1;Name=comp166262_c0_seq1;Dir=indeterminatecoverage=66.4;identity=95.1;matches=711;mismatches=12;indels=25;unknowns=0;Target=comp166262_c0_seq1 152 6 .;locus=RLOC_00012688
Chr1	stalkie_big_nohaplotig	exon	153994214	153994218	100	-	.	Parent=comp166262_c0_seq1.mrna1;Target=comp166262_c0_seq1 736 732 .
Chr1	stalkie_big_nohaplotig	exon	153995378	153995384	100	-	.	Parent=comp166262_c0_seq1.mrna1;Target=comp166262_c0_seq1 731 725 .
Chr1	stalkie_big_nohaplotig	exon	153995954	153995959	100	-	.	Parent=comp166262_c0_seq1.mrna1;Target=comp166262_c0_seq1 724 719 .
Chr1	stalkie_big_nohaplotig	exon	153997282	153997288	100	-	.	Parent=comp166262_c0_seq1.mrna1;Target=comp166262_c0_seq1 718 712 .
Chr1	stalkie_big_nohaplotig	exon	154010561	154010569	100	-	.	Parent=comp166262_c0_seq1.mrna1;Target=comp166262_c0_seq1 711 703 .
Chr1	stalkie_big_nohaplotig	exon	154011036	154011058	50	-	.	Parent=comp166262_c0_seq1.mrna1;Target=comp166262_c0_seq1 702 675 .
Chr1	stalkie_big_nohaplotig	exon	154017559	154017565	100	-	.	Parent=comp166262_c0_seq1.mrna1;Target=comp166262_c0_seq1 674 668 .
Chr1	stalkie_big_nohaplotig	exon	154021846	154021856	100	-	.	Parent=comp166262_c0_seq1.mrna1;Target=comp166262_c0_seq1 667 657 .
Chr1	stalkie_big_nohaplotig	exon	154026885	154026908	33	-	.	Parent=comp166262_c0_seq1.mrna1;Target=comp166262_c0_seq1 656 649 .
Chr1	stalkie_big_nohaplotig	exon	154026979	154026983	100	-	.	Parent=comp166262_c0_seq1.mrna1;Target=comp166262_c0_seq1 648 644 .
Chr1	stalkie_big_nohaplotig	exon	154034409	154034413	100	-	.	Parent=comp166262_c0_seq1.mrna1;Target=comp166262_c0_seq1 643 639 .
Chr1	stalkie_big_nohaplotig	exon	154034812	154034818	100	-	.	Parent=comp166262_c0_seq1.mrna1;Target=comp166262_c0_seq1 638 632 .
Chr1	stalkie_big_nohaplotig	exon	154038600	154038602	100	-	.	Parent=comp166262_c0_seq1.mrna1;Target=comp166262_c0_seq1 631 629 .
Chr1	stalkie_big_nohaplotig	exon	154043164	154043166	100	-	.	Parent=comp166262_c0_seq1.mrna1;Target=comp166262_c0_seq1 628 626 .
Chr1	stalkie_big_nohaplotig	exon	154050847	154050850	100	-	.	Parent=comp166262_c0_seq1.mrna1;Target=comp166262_c0_seq1 625 622 .
Chr1	stalkie_big_nohaplotig	exon	155938152	155938764	98	-	.	Parent=comp166262_c0_seq1.mrna1;Target=comp166262_c0_seq1 621 5 .
Chr1	stalkie_big_nohaplotig	CDS	155938621	155938763	.	-	0	Parent=comp166262_c0_seq1.mrna1
Chr1	gffcl	locus	154016085	154016537	.	+	.	ID=RLOC_00012690;geneIDs=comp142177_c0_seq1.path1;transcripts=comp142177_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154016085	154016537	.	+	.	ID=comp142177_c0_seq1.mrna1;geneID=comp142177_c0_seq1.path1;Name=comp142177_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.6;matches=451;mismatches=2;indels=0;unknowns=0;Target=comp142177_c0_seq1 453 1 .;CDS_Target=comp142177_c0_seq1 35 3 .;locus=RLOC_00012690
Chr1	stalkie_big_nohaplotig	exon	154016085	154016537	99	+	.	Parent=comp142177_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	154016087	154016119	.	+	0	Parent=comp142177_c0_seq1.mrna1
Chr1	gffcl	locus	154024914	154051798	.	+	.	ID=RLOC_00012691;geneIDs=FBgn0030897.1.path1;transcripts=FBgn0030897.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154024914	154051798	.	+	.	ID=FBgn0030897.1.mrna1;geneID=FBgn0030897.1.path1;Name=FBgn0030897.1;Dir=sensecoverage=100.0;identity=99.3;matches=593;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012691
Chr1	stalkie_big_nohaplotig	exon	154024914	154025013	98	+	.	Parent=FBgn0030897.1.mrna1;Target=FBgn0030897.1 1 100 +
Chr1	stalkie_big_nohaplotig	exon	154045070	154045094	100	+	.	Parent=FBgn0030897.1.mrna1;Target=FBgn0030897.1 101 125 +
Chr1	stalkie_big_nohaplotig	exon	154045244	154045292	100	+	.	Parent=FBgn0030897.1.mrna1;Target=FBgn0030897.1 126 174 +
Chr1	stalkie_big_nohaplotig	exon	154046138	154046227	100	+	.	Parent=FBgn0030897.1.mrna1;Target=FBgn0030897.1 175 264 +
Chr1	stalkie_big_nohaplotig	exon	154048496	154048574	100	+	.	Parent=FBgn0030897.1.mrna1;Target=FBgn0030897.1 265 343 +
Chr1	stalkie_big_nohaplotig	exon	154049469	154049557	98	+	.	Parent=FBgn0030897.1.mrna1;Target=FBgn0030897.1 344 432 +
Chr1	stalkie_big_nohaplotig	exon	154051634	154051798	99	+	.	Parent=FBgn0030897.1.mrna1;Target=FBgn0030897.1 433 597 +
Chr1	stalkie_big_nohaplotig	CDS	154024914	154025013	.	+	0	Parent=FBgn0030897.1.mrna1;Target=FBgn0030897.1 1 100 +
Chr1	stalkie_big_nohaplotig	CDS	154045070	154045094	.	+	2	Parent=FBgn0030897.1.mrna1;Target=FBgn0030897.1 101 125 +
Chr1	stalkie_big_nohaplotig	CDS	154045244	154045292	.	+	1	Parent=FBgn0030897.1.mrna1;Target=FBgn0030897.1 126 174 +
Chr1	stalkie_big_nohaplotig	CDS	154046138	154046227	.	+	0	Parent=FBgn0030897.1.mrna1;Target=FBgn0030897.1 175 264 +
Chr1	stalkie_big_nohaplotig	CDS	154048496	154048574	.	+	0	Parent=FBgn0030897.1.mrna1;Target=FBgn0030897.1 265 343 +
Chr1	stalkie_big_nohaplotig	CDS	154049469	154049557	.	+	2	Parent=FBgn0030897.1.mrna1;Target=FBgn0030897.1 344 432 +
Chr1	stalkie_big_nohaplotig	CDS	154051634	154051798	.	+	0	Parent=FBgn0030897.1.mrna1;Target=FBgn0030897.1 433 597 +
Chr1	gffcl	locus	154061621	154062220	.	+	.	ID=RLOC_00012692;geneIDs=comp101554_c0_seq1.path1;transcripts=comp101554_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154061621	154062220	.	+	.	ID=comp101554_c0_seq1.mrna1;geneID=comp101554_c0_seq1.path1;Name=comp101554_c0_seq1;Dir=indeterminatecoverage=96.8;identity=99.5;matches=598;mismatches=2;indels=1;unknowns=0;Target=comp101554_c0_seq1 601 1 .;CDS_Target=comp101554_c0_seq1 121 2 .;locus=RLOC_00012692
Chr1	stalkie_big_nohaplotig	exon	154061621	154062220	99	+	.	Parent=comp101554_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	154061622	154061741	.	+	0	Parent=comp101554_c0_seq1.mrna1
Chr1	gffcl	locus	154086216	154086854	.	-	.	ID=RLOC_00012693;geneIDs=comp148419_c0_seq1.path1;transcripts=comp148419_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154086216	154086854	.	-	.	ID=comp148419_c0_seq1.mrna1;geneID=comp148419_c0_seq1.path1;Name=comp148419_c0_seq1;Dir=indeterminatecoverage=93.8;identity=99.7;matches=637;mismatches=2;indels=0;unknowns=0;Target=comp148419_c0_seq1 663 25 .;CDS_Target=comp148419_c0_seq1 404 270 .;locus=RLOC_00012693
Chr1	stalkie_big_nohaplotig	exon	154086216	154086854	99	-	.	Parent=comp148419_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	154086475	154086609	.	-	0	Parent=comp148419_c0_seq1.mrna1
Chr1	gffcl	locus	154107199	154108319	.	-	.	ID=RLOC_00012694;geneIDs=comp157279_c0_seq1.path1;transcripts=comp157279_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154107199	154108319	.	-	.	ID=comp157279_c0_seq1.mrna1;geneID=comp157279_c0_seq1.path1;Name=comp157279_c0_seq1;Dir=antisensecoverage=97.6;identity=87.9;matches=855;mismatches=61;indels=57;unknowns=0;locus=RLOC_00012694
Chr1	stalkie_big_nohaplotig	exon	154107199	154107406	83	-	.	Parent=comp157279_c0_seq1.mrna1;Target=comp157279_c0_seq1 15 222 -
Chr1	stalkie_big_nohaplotig	exon	154107439	154107810	81	-	.	Parent=comp157279_c0_seq1.mrna1;Target=comp157279_c0_seq1 240 667 -
Chr1	stalkie_big_nohaplotig	exon	154107870	154107978	98	-	.	Parent=comp157279_c0_seq1.mrna1;Target=comp157279_c0_seq1 668 777 -
Chr1	stalkie_big_nohaplotig	exon	154108032	154108117	98	-	.	Parent=comp157279_c0_seq1.mrna1;Target=comp157279_c0_seq1 778 863 -
Chr1	stalkie_big_nohaplotig	exon	154108179	154108319	98	-	.	Parent=comp157279_c0_seq1.mrna1;Target=comp157279_c0_seq1 864 1004 -
Chr1	stalkie_big_nohaplotig	CDS	154107908	154107978	.	-	2	Parent=comp157279_c0_seq1.mrna1;Target=comp157279_c0_seq1 707 777 .
Chr1	stalkie_big_nohaplotig	CDS	154108032	154108056	.	-	0	Parent=comp157279_c0_seq1.mrna1;Target=comp157279_c0_seq1 778 802 .
Chr1	gffcl	locus	154110617	154161181	.	+	.	ID=RLOC_00012695;geneIDs=comp155452_c0_seq1.path1;transcripts=comp155452_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154110617	154161181	.	+	.	ID=comp155452_c0_seq1.mrna1;geneID=comp155452_c0_seq1.path1;Name=comp155452_c0_seq1;Dir=sensecoverage=97.8;identity=99.5;matches=1548;mismatches=6;indels=2;unknowns=0;locus=RLOC_00012695
Chr1	stalkie_big_nohaplotig	exon	154110617	154110816	100	+	.	Parent=comp155452_c0_seq1.mrna1;Target=comp155452_c0_seq1 36 235 +
Chr1	stalkie_big_nohaplotig	exon	154151172	154151196	100	+	.	Parent=comp155452_c0_seq1.mrna1;Target=comp155452_c0_seq1 236 260 +
Chr1	stalkie_big_nohaplotig	exon	154157425	154157473	100	+	.	Parent=comp155452_c0_seq1.mrna1;Target=comp155452_c0_seq1 261 309 +
Chr1	stalkie_big_nohaplotig	exon	154158268	154158357	100	+	.	Parent=comp155452_c0_seq1.mrna1;Target=comp155452_c0_seq1 310 399 +
Chr1	stalkie_big_nohaplotig	exon	154158594	154158672	100	+	.	Parent=comp155452_c0_seq1.mrna1;Target=comp155452_c0_seq1 400 478 +
Chr1	stalkie_big_nohaplotig	exon	154159827	154159915	98	+	.	Parent=comp155452_c0_seq1.mrna1;Target=comp155452_c0_seq1 479 567 +
Chr1	stalkie_big_nohaplotig	exon	154160160	154161181	99	+	.	Parent=comp155452_c0_seq1.mrna1;Target=comp155452_c0_seq1 568 1591 +
Chr1	stalkie_big_nohaplotig	CDS	154110753	154110816	.	+	0	Parent=comp155452_c0_seq1.mrna1;Target=comp155452_c0_seq1 172 235 +
Chr1	stalkie_big_nohaplotig	CDS	154151172	154151196	.	+	2	Parent=comp155452_c0_seq1.mrna1;Target=comp155452_c0_seq1 236 260 +
Chr1	stalkie_big_nohaplotig	CDS	154157425	154157473	.	+	1	Parent=comp155452_c0_seq1.mrna1;Target=comp155452_c0_seq1 261 309 +
Chr1	stalkie_big_nohaplotig	CDS	154158268	154158357	.	+	0	Parent=comp155452_c0_seq1.mrna1;Target=comp155452_c0_seq1 310 399 +
Chr1	stalkie_big_nohaplotig	CDS	154158594	154158672	.	+	0	Parent=comp155452_c0_seq1.mrna1;Target=comp155452_c0_seq1 400 478 +
Chr1	stalkie_big_nohaplotig	CDS	154159827	154159915	.	+	2	Parent=comp155452_c0_seq1.mrna1;Target=comp155452_c0_seq1 479 567 +
Chr1	stalkie_big_nohaplotig	CDS	154160160	154160327	.	+	0	Parent=comp155452_c0_seq1.mrna1;Target=comp155452_c0_seq1 568 735 +
Chr1	gffcl	locus	154138830	154139957	.	+	.	ID=RLOC_00012696;geneIDs=comp153998_c0_seq1.path1;transcripts=comp153998_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154138830	154139957	.	+	.	ID=comp153998_c0_seq1.mrna1;geneID=comp153998_c0_seq1.path1;Name=comp153998_c0_seq1;Dir=sensecoverage=99.8;identity=87.6;matches=813;mismatches=70;indels=45;unknowns=0;Target=comp153998_c0_seq1 463 489 +;locus=RLOC_00012696
Chr1	stalkie_big_nohaplotig	exon	154138830	154138845	93	+	.	Parent=comp153998_c0_seq1.mrna1;Target=comp153998_c0_seq1 2 17 +
Chr1	stalkie_big_nohaplotig	exon	154139070	154139957	87	+	.	Parent=comp153998_c0_seq1.mrna1;Target=comp153998_c0_seq1 18 908 +
Chr1	stalkie_big_nohaplotig	CDS	154139535	154139561	.	+	0	Parent=comp153998_c0_seq1.mrna1
Chr1	gffcl	locus	154149871	154151042	.	+	.	ID=RLOC_00012697;geneIDs=comp146127_c0_seq1.path1;transcripts=comp146127_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154149871	154151042	.	+	.	ID=comp146127_c0_seq1.mrna1;geneID=comp146127_c0_seq1.path1;Name=comp146127_c0_seq1;Dir=indeterminatecoverage=98.0;identity=99.1;matches=1161;mismatches=9;indels=2;unknowns=0;Target=comp146127_c0_seq1 1170 1 .;CDS_Target=comp146127_c0_seq1 366 178 .;locus=RLOC_00012697
Chr1	stalkie_big_nohaplotig	exon	154149871	154151042	99	+	.	Parent=comp146127_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	154150048	154150236	.	+	0	Parent=comp146127_c0_seq1.mrna1
Chr1	gffcl	locus	154152451	154153383	.	-	.	ID=RLOC_00012698;geneIDs=comp156058_c0_seq1.path1;transcripts=comp156058_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154152451	154153383	.	-	.	ID=comp156058_c0_seq1.mrna1;geneID=comp156058_c0_seq1.path1;Name=comp156058_c0_seq1;Dir=antisensecoverage=99.2;identity=95.6;matches=679;mismatches=19;indels=12;unknowns=0;Target=comp156058_c0_seq1 40 207 .;locus=RLOC_00012698
Chr1	stalkie_big_nohaplotig	exon	154152451	154152882	97	-	.	Parent=comp156058_c0_seq1.mrna1;Target=comp156058_c0_seq1 7 438 -
Chr1	stalkie_big_nohaplotig	exon	154152923	154153002	95	-	.	Parent=comp156058_c0_seq1.mrna1;Target=comp156058_c0_seq1 448 527 -
Chr1	stalkie_big_nohaplotig	exon	154153077	154153121	95	-	.	Parent=comp156058_c0_seq1.mrna1;Target=comp156058_c0_seq1 544 588 -
Chr1	stalkie_big_nohaplotig	exon	154153178	154153255	98	-	.	Parent=comp156058_c0_seq1.mrna1;Target=comp156058_c0_seq1 589 666 -
Chr1	stalkie_big_nohaplotig	exon	154153321	154153383	84	-	.	Parent=comp156058_c0_seq1.mrna1;Target=comp156058_c0_seq1 667 741 -
Chr1	stalkie_big_nohaplotig	CDS	154152484	154152651	.	-	0	Parent=comp156058_c0_seq1.mrna1
Chr1	gffcl	locus	154161443	154162622	.	-	.	ID=RLOC_00012699;geneIDs=comp159027_c0_seq1.path1;transcripts=comp159027_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154161443	154162622	.	-	.	ID=comp159027_c0_seq1.mrna1;geneID=comp159027_c0_seq1.path1;Name=comp159027_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.5;matches=1132;mismatches=48;indels=5;unknowns=0;Target=comp159027_c0_seq1 1185 1 .;CDS_Target=comp159027_c0_seq1 891 823 .;locus=RLOC_00012699
Chr1	stalkie_big_nohaplotig	exon	154161443	154162622	95	-	.	Parent=comp159027_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	154161737	154161805	.	-	0	Parent=comp159027_c0_seq1.mrna1
Chr1	gffcl	locus	154162691	154162899	.	+	.	ID=RLOC_00012700;geneIDs=comp190881_c0_seq1.path1;transcripts=comp190881_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154162691	154162899	.	+	.	ID=comp190881_c0_seq1.mrna1;geneID=comp190881_c0_seq1.path1;Name=comp190881_c0_seq1;Dir=indeterminatecoverage=96.4;identity=94.3;matches=200;mismatches=9;indels=3;unknowns=0;Target=comp190881_c0_seq1 212 1 .;CDS_Target=comp190881_c0_seq1 63 1 .;locus=RLOC_00012700
Chr1	stalkie_big_nohaplotig	exon	154162691	154162899	94	+	.	Parent=comp190881_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	154162691	154162753	.	+	0	Parent=comp190881_c0_seq1.mrna1
Chr1	gffcl	locus	154163483	154164223	.	-	.	ID=RLOC_00012701;geneIDs=comp151455_c0_seq1.path1;transcripts=comp151455_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154163483	154164223	.	-	.	ID=comp151455_c0_seq1.mrna1;geneID=comp151455_c0_seq1.path1;Name=comp151455_c0_seq1;Dir=indeterminatecoverage=97.2;identity=97.5;matches=727;mismatches=7;indels=12;unknowns=0;Target=comp151455_c0_seq1 739 1 .;CDS_Target=comp151455_c0_seq1 306 250 .;locus=RLOC_00012701
Chr1	stalkie_big_nohaplotig	exon	154163483	154164223	97	-	.	Parent=comp151455_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	154163914	154163971	.	-	0	Parent=comp151455_c0_seq1.mrna1
Chr1	gffcl	locus	154167861	154168071	.	+	.	ID=RLOC_00012702;geneIDs=comp147960_c0_seq1.path1;transcripts=comp147960_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154167861	154168071	.	+	.	ID=comp147960_c0_seq1.mrna1;geneID=comp147960_c0_seq1.path1;Name=comp147960_c0_seq1;Dir=indeterminatecoverage=35.8;identity=95.8;matches=206;mismatches=5;indels=4;unknowns=0;Target=comp147960_c0_seq1 600 386 .;CDS_Target=comp147960_c0_seq1 417 388 .;locus=RLOC_00012702
Chr1	stalkie_big_nohaplotig	exon	154167861	154168071	95	+	.	Parent=comp147960_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	154167863	154167888	.	+	0	Parent=comp147960_c0_seq1.mrna1
Chr1	gffcl	locus	154168346	154172121	.	-	.	ID=RLOC_00012703;geneIDs=comp150786_c2_seq1.path1;transcripts=comp150786_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154168346	154172121	.	-	.	ID=comp150786_c2_seq1.mrna1;geneID=comp150786_c2_seq1.path1;Name=comp150786_c2_seq1;Dir=sensecoverage=98.9;identity=98.9;matches=1024;mismatches=10;indels=1;unknowns=0;locus=RLOC_00012703
Chr1	stalkie_big_nohaplotig	exon	154168346	154168989	99	-	.	Parent=comp150786_c2_seq1.mrna1;Target=comp150786_c2_seq1 402 1045 +
Chr1	stalkie_big_nohaplotig	exon	154171731	154172121	98	-	.	Parent=comp150786_c2_seq1.mrna1;Target=comp150786_c2_seq1 12 401 +
Chr1	stalkie_big_nohaplotig	CDS	154168441	154168989	.	-	0	Parent=comp150786_c2_seq1.mrna1;Target=comp150786_c2_seq1 402 950 +
Chr1	stalkie_big_nohaplotig	CDS	154171731	154171916	.	-	0	Parent=comp150786_c2_seq1.mrna1;Target=comp150786_c2_seq1 216 401 +
Chr1	gffcl	locus	154201727	154202873	.	-	.	ID=RLOC_00012704;geneIDs=comp156705_c0_seq1.path1;transcripts=comp156705_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154201727	154202873	.	-	.	ID=comp156705_c0_seq1.mrna1;geneID=comp156705_c0_seq1.path1;Name=comp156705_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=1019;mismatches=4;indels=1;unknowns=0;locus=RLOC_00012704
Chr1	stalkie_big_nohaplotig	exon	154201727	154202402	99	-	.	Parent=comp156705_c0_seq1.mrna1;Target=comp156705_c0_seq1 1 676 -
Chr1	stalkie_big_nohaplotig	exon	154202527	154202873	99	-	.	Parent=comp156705_c0_seq1.mrna1;Target=comp156705_c0_seq1 677 1024 -
Chr1	stalkie_big_nohaplotig	CDS	154201956	154202402	.	-	0	Parent=comp156705_c0_seq1.mrna1;Target=comp156705_c0_seq1 230 676 .
Chr1	stalkie_big_nohaplotig	CDS	154202527	154202697	.	-	0	Parent=comp156705_c0_seq1.mrna1;Target=comp156705_c0_seq1 677 847 .
Chr1	gffcl	locus	154205099	154205817	.	-	.	ID=RLOC_00012705;geneIDs=comp152929_c0_seq1.path1;transcripts=comp152929_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154205099	154205817	.	-	.	ID=comp152929_c0_seq1.mrna1;geneID=comp152929_c0_seq1.path1;Name=comp152929_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.6;matches=717;mismatches=2;indels=1;unknowns=0;Target=comp152929_c0_seq1 724 5 .;CDS_Target=comp152929_c0_seq1 93 7 .;locus=RLOC_00012705
Chr1	stalkie_big_nohaplotig	exon	154205099	154205817	99	-	.	Parent=comp152929_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	154205729	154205815	.	-	0	Parent=comp152929_c0_seq1.mrna1
Chr1	gffcl	locus	154206185	154207770	.	+	.	ID=RLOC_00012706;geneIDs=comp86779_c0_seq1.path1,comp162679_c0_seq1.path1;transcripts=comp162679_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154206423	154207770	.	+	.	ID=comp162679_c0_seq1.mrna1;geneID=comp162679_c0_seq1.path1;Name=comp162679_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.6;matches=1290;mismatches=52;indels=7;unknowns=0;Target=comp162679_c0_seq1 1343 1 .;CDS_Target=comp162679_c0_seq1 886 713 .;locus=RLOC_00012706
Chr1	stalkie_big_nohaplotig	exon	154206423	154207770	95	+	.	Parent=comp162679_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	154207141	154207314	.	+	0	Parent=comp162679_c0_seq1.mrna1
Chr1	gffcl	locus	154208904	154232372	.	-	.	ID=RLOC_00012707;geneIDs=FBgn0053639.1.path1;transcripts=FBgn0053639.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154208904	154232372	.	-	.	ID=FBgn0053639.1.mrna1;geneID=FBgn0053639.1.path1;Name=FBgn0053639.1;Dir=sensecoverage=100.0;identity=99.9;matches=1325;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012707
Chr1	stalkie_big_nohaplotig	exon	154208904	154209014	100	-	.	Parent=FBgn0053639.1.mrna1;Target=FBgn0053639.1 1216 1326 +
Chr1	stalkie_big_nohaplotig	exon	154209113	154209265	100	-	.	Parent=FBgn0053639.1.mrna1;Target=FBgn0053639.1 1063 1215 +
Chr1	stalkie_big_nohaplotig	exon	154210939	154211033	100	-	.	Parent=FBgn0053639.1.mrna1;Target=FBgn0053639.1 968 1062 +
Chr1	stalkie_big_nohaplotig	exon	154211150	154211345	100	-	.	Parent=FBgn0053639.1.mrna1;Target=FBgn0053639.1 772 967 +
Chr1	stalkie_big_nohaplotig	exon	154211523	154211676	100	-	.	Parent=FBgn0053639.1.mrna1;Target=FBgn0053639.1 618 771 +
Chr1	stalkie_big_nohaplotig	exon	154211741	154211834	100	-	.	Parent=FBgn0053639.1.mrna1;Target=FBgn0053639.1 524 617 +
Chr1	stalkie_big_nohaplotig	exon	154211904	154212053	99	-	.	Parent=FBgn0053639.1.mrna1;Target=FBgn0053639.1 374 523 +
Chr1	stalkie_big_nohaplotig	exon	154229791	154229944	100	-	.	Parent=FBgn0053639.1.mrna1;Target=FBgn0053639.1 220 373 +
Chr1	stalkie_big_nohaplotig	exon	154232154	154232372	100	-	.	Parent=FBgn0053639.1.mrna1;Target=FBgn0053639.1 1 219 +
Chr1	stalkie_big_nohaplotig	CDS	154208904	154209014	.	-	0	Parent=FBgn0053639.1.mrna1;Target=FBgn0053639.1 1216 1326 +
Chr1	stalkie_big_nohaplotig	CDS	154209113	154209265	.	-	0	Parent=FBgn0053639.1.mrna1;Target=FBgn0053639.1 1063 1215 +
Chr1	stalkie_big_nohaplotig	CDS	154210939	154211033	.	-	2	Parent=FBgn0053639.1.mrna1;Target=FBgn0053639.1 968 1062 +
Chr1	stalkie_big_nohaplotig	CDS	154211150	154211345	.	-	0	Parent=FBgn0053639.1.mrna1;Target=FBgn0053639.1 772 967 +
Chr1	stalkie_big_nohaplotig	CDS	154211523	154211676	.	-	1	Parent=FBgn0053639.1.mrna1;Target=FBgn0053639.1 618 771 +
Chr1	stalkie_big_nohaplotig	CDS	154211741	154211834	.	-	2	Parent=FBgn0053639.1.mrna1;Target=FBgn0053639.1 524 617 +
Chr1	stalkie_big_nohaplotig	CDS	154211904	154212053	.	-	2	Parent=FBgn0053639.1.mrna1;Target=FBgn0053639.1 374 523 +
Chr1	stalkie_big_nohaplotig	CDS	154229791	154229944	.	-	0	Parent=FBgn0053639.1.mrna1;Target=FBgn0053639.1 220 373 +
Chr1	stalkie_big_nohaplotig	CDS	154232154	154232372	.	-	0	Parent=FBgn0053639.1.mrna1;Target=FBgn0053639.1 1 219 +
Chr1	gffcl	locus	154270517	154271424	.	-	.	ID=RLOC_00012708;geneIDs=comp158570_c0_seq1.path1;transcripts=comp158570_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154270517	154271424	.	-	.	ID=comp158570_c0_seq1.mrna1;geneID=comp158570_c0_seq1.path1;Name=comp158570_c0_seq1;Dir=sensecoverage=95.7;identity=98.0;matches=719;mismatches=15;indels=0;unknowns=0;Target=comp158570_c0_seq1 480 527 +;locus=RLOC_00012708
Chr1	stalkie_big_nohaplotig	exon	154270517	154270783	95	-	.	Parent=comp158570_c0_seq1.mrna1;Target=comp158570_c0_seq1 479 745 +
Chr1	stalkie_big_nohaplotig	exon	154270837	154271091	99	-	.	Parent=comp158570_c0_seq1.mrna1;Target=comp158570_c0_seq1 224 478 +
Chr1	stalkie_big_nohaplotig	exon	154271149	154271239	97	-	.	Parent=comp158570_c0_seq1.mrna1;Target=comp158570_c0_seq1 133 223 +
Chr1	stalkie_big_nohaplotig	exon	154271304	154271424	100	-	.	Parent=comp158570_c0_seq1.mrna1;Target=comp158570_c0_seq1 12 132 +
Chr1	stalkie_big_nohaplotig	CDS	154270735	154270782	.	-	0	Parent=comp158570_c0_seq1.mrna1
Chr1	gffcl	locus	154286712	154287505	.	-	.	ID=RLOC_00012710;geneIDs=comp150852_c0_seq1.path1;transcripts=comp150852_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154286712	154287505	.	-	.	ID=comp150852_c0_seq1.mrna1;geneID=comp150852_c0_seq1.path1;Name=comp150852_c0_seq1;Dir=sensecoverage=99.5;identity=99.4;matches=616;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012710
Chr1	stalkie_big_nohaplotig	exon	154286712	154286967	98	-	.	Parent=comp150852_c0_seq1.mrna1;Target=comp150852_c0_seq1 366 621 +
Chr1	stalkie_big_nohaplotig	exon	154287020	154287108	100	-	.	Parent=comp150852_c0_seq1.mrna1;Target=comp150852_c0_seq1 277 365 +
Chr1	stalkie_big_nohaplotig	exon	154287172	154287327	99	-	.	Parent=comp150852_c0_seq1.mrna1;Target=comp150852_c0_seq1 121 276 +
Chr1	stalkie_big_nohaplotig	exon	154287387	154287505	100	-	.	Parent=comp150852_c0_seq1.mrna1;Target=comp150852_c0_seq1 2 120 +
Chr1	stalkie_big_nohaplotig	CDS	154286782	154286967	.	-	0	Parent=comp150852_c0_seq1.mrna1;Target=comp150852_c0_seq1 366 551 +
Chr1	stalkie_big_nohaplotig	CDS	154287020	154287052	.	-	0	Parent=comp150852_c0_seq1.mrna1;Target=comp150852_c0_seq1 333 365 +
Chr1	gffcl	locus	154294652	154296257	.	-	.	ID=RLOC_00012711;geneIDs=comp162258_c0_seq1.path1;transcripts=comp162258_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154294652	154296257	.	-	.	ID=comp162258_c0_seq1.mrna1;geneID=comp162258_c0_seq1.path1;Name=comp162258_c0_seq1;Dir=sensecoverage=99.0;identity=94.9;matches=1184;mismatches=31;indels=33;unknowns=0;Target=comp162258_c0_seq1 313 345 +;locus=RLOC_00012711
Chr1	stalkie_big_nohaplotig	exon	154294652	154295582	93	-	.	Parent=comp162258_c0_seq1.mrna1;Target=comp162258_c0_seq1 295 1258 +
Chr1	stalkie_big_nohaplotig	exon	154295974	154296257	98	-	.	Parent=comp162258_c0_seq1.mrna1;Target=comp162258_c0_seq1 11 294 +
Chr1	stalkie_big_nohaplotig	CDS	154295533	154295564	.	-	0	Parent=comp162258_c0_seq1.mrna1
Chr1	gffcl	locus	154296808	154298076	.	+	.	ID=RLOC_00012712;geneIDs=comp160558_c0_seq1.path1;transcripts=comp160558_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154296808	154298076	.	+	.	ID=comp160558_c0_seq1.mrna1;geneID=comp160558_c0_seq1.path1;Name=comp160558_c0_seq1;Dir=sensecoverage=99.1;identity=97.5;matches=841;mismatches=19;indels=3;unknowns=0;locus=RLOC_00012712
Chr1	stalkie_big_nohaplotig	exon	154296808	154296967	100	+	.	Parent=comp160558_c0_seq1.mrna1;Target=comp160558_c0_seq1 8 167 +
Chr1	stalkie_big_nohaplotig	exon	154297050	154297126	97	+	.	Parent=comp160558_c0_seq1.mrna1;Target=comp160558_c0_seq1 168 244 +
Chr1	stalkie_big_nohaplotig	exon	154297181	154297238	98	+	.	Parent=comp160558_c0_seq1.mrna1;Target=comp160558_c0_seq1 245 302 +
Chr1	stalkie_big_nohaplotig	exon	154297512	154298076	96	+	.	Parent=comp160558_c0_seq1.mrna1;Target=comp160558_c0_seq1 303 870 +
Chr1	stalkie_big_nohaplotig	CDS	154297232	154297238	.	+	0	Parent=comp160558_c0_seq1.mrna1;Target=comp160558_c0_seq1 296 302 +
Chr1	stalkie_big_nohaplotig	CDS	154297512	154297624	.	+	2	Parent=comp160558_c0_seq1.mrna1;Target=comp160558_c0_seq1 303 415 +
Chr1	gffcl	locus	154306861	154309655	.	-	.	ID=RLOC_00012713;geneIDs=comp161045_c0_seq1.path1;transcripts=comp161045_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154306861	154309655	.	-	.	ID=comp161045_c0_seq1.mrna1;geneID=comp161045_c0_seq1.path1;Name=comp161045_c0_seq1;Dir=sensecoverage=99.2;identity=93.4;matches=1009;mismatches=38;indels=33;unknowns=0;Target=comp161045_c0_seq1 94 152 +;locus=RLOC_00012713
Chr1	stalkie_big_nohaplotig	exon	154306861	154307537	92	-	.	Parent=comp161045_c0_seq1.mrna1;Target=comp161045_c0_seq1 390 1082 +
Chr1	stalkie_big_nohaplotig	exon	154308049	154308141	100	-	.	Parent=comp161045_c0_seq1.mrna1;Target=comp161045_c0_seq1 297 389 +
Chr1	stalkie_big_nohaplotig	exon	154309175	154309216	100	-	.	Parent=comp161045_c0_seq1.mrna1;Target=comp161045_c0_seq1 255 296 +
Chr1	stalkie_big_nohaplotig	exon	154309281	154309376	85	-	.	Parent=comp161045_c0_seq1.mrna1;Target=comp161045_c0_seq1 153 254 +
Chr1	stalkie_big_nohaplotig	exon	154309511	154309655	97	-	.	Parent=comp161045_c0_seq1.mrna1;Target=comp161045_c0_seq1 9 152 +
Chr1	stalkie_big_nohaplotig	CDS	154309511	154309569	.	-	0	Parent=comp161045_c0_seq1.mrna1
Chr1	gffcl	locus	154309784	154310600	.	-	.	ID=RLOC_00012714;geneIDs=comp151669_c0_seq1.path1;transcripts=comp151669_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154309784	154310600	.	-	.	ID=comp151669_c0_seq1.mrna1;geneID=comp151669_c0_seq1.path1;Name=comp151669_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.2;matches=680;mismatches=62;indels=4;unknowns=0;Target=comp151669_c0_seq1 133 62 .;locus=RLOC_00012714
Chr1	stalkie_big_nohaplotig	exon	154309784	154310355	92	-	.	Parent=comp151669_c0_seq1.mrna1;Target=comp151669_c0_seq1 742 172 .
Chr1	stalkie_big_nohaplotig	exon	154310427	154310600	87	-	.	Parent=comp151669_c0_seq1.mrna1;Target=comp151669_c0_seq1 171 1 .
Chr1	stalkie_big_nohaplotig	CDS	154310465	154310539	.	-	0	Parent=comp151669_c0_seq1.mrna1
Chr1	gffcl	locus	154405984	154412709	.	+	.	ID=RLOC_00012716;geneIDs=FBgn0004956.3.path1;transcripts=FBgn0004956.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154405984	154412709	.	+	.	ID=FBgn0004956.3.mrna1;geneID=FBgn0004956.3.path1;Name=FBgn0004956.3;Dir=sensecoverage=100.0;identity=99.2;matches=1021;mismatches=7;indels=1;unknowns=0;Target=FBgn0004956.3 3 32 +;locus=RLOC_00012716
Chr1	stalkie_big_nohaplotig	exon	154405984	154406162	98	+	.	Parent=FBgn0004956.3.mrna1;Target=FBgn0004956.3 1 180 +
Chr1	stalkie_big_nohaplotig	exon	154406735	154406878	100	+	.	Parent=FBgn0004956.3.mrna1;Target=FBgn0004956.3 181 324 +
Chr1	stalkie_big_nohaplotig	exon	154412005	154412709	99	+	.	Parent=FBgn0004956.3.mrna1;Target=FBgn0004956.3 325 1029 +
Chr1	stalkie_big_nohaplotig	CDS	154405986	154406014	.	+	0	Parent=FBgn0004956.3.mrna1
Chr1	gffcl	locus	154539821	154540765	.	+	.	ID=RLOC_00012717;geneIDs=comp155962_c0_seq1.path1;transcripts=comp155962_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154539821	154540765	.	+	.	ID=comp155962_c0_seq1.mrna1;geneID=comp155962_c0_seq1.path1;Name=comp155962_c0_seq1;Dir=antisensecoverage=96.4;identity=98.2;matches=756;mismatches=13;indels=1;unknowns=0;locus=RLOC_00012717
Chr1	stalkie_big_nohaplotig	exon	154539821	154539960	99	+	.	Parent=comp155962_c0_seq1.mrna1;Target=comp155962_c0_seq1 632 771 -
Chr1	stalkie_big_nohaplotig	exon	154540023	154540231	99	+	.	Parent=comp155962_c0_seq1.mrna1;Target=comp155962_c0_seq1 423 631 -
Chr1	stalkie_big_nohaplotig	exon	154540284	154540396	97	+	.	Parent=comp155962_c0_seq1.mrna1;Target=comp155962_c0_seq1 310 422 -
Chr1	stalkie_big_nohaplotig	exon	154540459	154540765	97	+	.	Parent=comp155962_c0_seq1.mrna1;Target=comp155962_c0_seq1 2 309 -
Chr1	stalkie_big_nohaplotig	CDS	154540186	154540231	.	+	0	Parent=comp155962_c0_seq1.mrna1;Target=comp155962_c0_seq1 423 468 .
Chr1	stalkie_big_nohaplotig	CDS	154540284	154540363	.	+	2	Parent=comp155962_c0_seq1.mrna1;Target=comp155962_c0_seq1 343 422 .
Chr1	gffcl	locus	154542736	154544045	.	+	.	ID=RLOC_00012718;geneIDs=comp159185_c0_seq1.path1;transcripts=comp159185_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154542736	154544045	.	+	.	ID=comp159185_c0_seq1.mrna1;geneID=comp159185_c0_seq1.path1;Name=comp159185_c0_seq1;Dir=antisensecoverage=95.1;identity=99.3;matches=1001;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012718
Chr1	stalkie_big_nohaplotig	exon	154542736	154542908	98	+	.	Parent=comp159185_c0_seq1.mrna1;Target=comp159185_c0_seq1 858 1030 -
Chr1	stalkie_big_nohaplotig	exon	154542993	154543091	98	+	.	Parent=comp159185_c0_seq1.mrna1;Target=comp159185_c0_seq1 759 857 -
Chr1	stalkie_big_nohaplotig	exon	154543144	154543207	100	+	.	Parent=comp159185_c0_seq1.mrna1;Target=comp159185_c0_seq1 695 758 -
Chr1	stalkie_big_nohaplotig	exon	154543267	154543468	99	+	.	Parent=comp159185_c0_seq1.mrna1;Target=comp159185_c0_seq1 493 694 -
Chr1	stalkie_big_nohaplotig	exon	154543519	154543632	99	+	.	Parent=comp159185_c0_seq1.mrna1;Target=comp159185_c0_seq1 379 492 -
Chr1	stalkie_big_nohaplotig	exon	154543690	154544045	99	+	.	Parent=comp159185_c0_seq1.mrna1;Target=comp159185_c0_seq1 23 378 -
Chr1	stalkie_big_nohaplotig	CDS	154543080	154543091	.	+	0	Parent=comp159185_c0_seq1.mrna1;Target=comp159185_c0_seq1 759 770 .
Chr1	stalkie_big_nohaplotig	CDS	154543144	154543207	.	+	0	Parent=comp159185_c0_seq1.mrna1;Target=comp159185_c0_seq1 695 758 .
Chr1	stalkie_big_nohaplotig	CDS	154543267	154543382	.	+	2	Parent=comp159185_c0_seq1.mrna1;Target=comp159185_c0_seq1 579 694 .
Chr1	gffcl	locus	154544629	154546073	.	+	.	ID=RLOC_00012719;geneIDs=comp158198_c0_seq1.path2;transcripts=comp158198_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	154544629	154546073	.	+	.	ID=comp158198_c0_seq1.mrna2;geneID=comp158198_c0_seq1.path2;Name=comp158198_c0_seq1;Dir=sensecoverage=96.5;identity=98.0;matches=1249;mismatches=11;indels=14;unknowns=0;Target=comp158198_c0_seq1 855 998 +;locus=RLOC_00012719
Chr1	stalkie_big_nohaplotig	exon	154544629	154545218	98	+	.	Parent=comp158198_c0_seq1.mrna2;Target=comp158198_c0_seq1 29 618 +
Chr1	stalkie_big_nohaplotig	exon	154545274	154545366	100	+	.	Parent=comp158198_c0_seq1.mrna2;Target=comp158198_c0_seq1 619 711 +
Chr1	stalkie_big_nohaplotig	exon	154545432	154545720	94	+	.	Parent=comp158198_c0_seq1.mrna2;Target=comp158198_c0_seq1 712 1002 +
Chr1	stalkie_big_nohaplotig	exon	154545780	154546073	99	+	.	Parent=comp158198_c0_seq1.mrna2;Target=comp158198_c0_seq1 1003 1296 +
Chr1	stalkie_big_nohaplotig	CDS	154545573	154545716	.	+	0	Parent=comp158198_c0_seq1.mrna2
Chr1	gffcl	locus	154548841	154549717	.	-	.	ID=RLOC_00012720;geneIDs=comp157381_c0_seq1.path1;transcripts=comp157381_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154548841	154549717	.	-	.	ID=comp157381_c0_seq1.mrna1;geneID=comp157381_c0_seq1.path1;Name=comp157381_c0_seq1;Dir=antisensecoverage=96.5;identity=98.4;matches=756;mismatches=8;indels=4;unknowns=0;Target=comp157381_c0_seq1 530 610 .;locus=RLOC_00012720
Chr1	stalkie_big_nohaplotig	exon	154548841	154549101	98	-	.	Parent=comp157381_c0_seq1.mrna1;Target=comp157381_c0_seq1 28 288 -
Chr1	stalkie_big_nohaplotig	exon	154549157	154549475	97	-	.	Parent=comp157381_c0_seq1.mrna1;Target=comp157381_c0_seq1 289 611 -
Chr1	stalkie_big_nohaplotig	exon	154549534	154549717	98	-	.	Parent=comp157381_c0_seq1.mrna1;Target=comp157381_c0_seq1 612 795 -
Chr1	stalkie_big_nohaplotig	CDS	154549394	154549474	.	-	0	Parent=comp157381_c0_seq1.mrna1
Chr1	gffcl	locus	154550404	154551848	.	-	.	ID=RLOC_00012721;geneIDs=comp158198_c0_seq1.path1;transcripts=comp158198_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154550404	154551848	.	-	.	ID=comp158198_c0_seq1.mrna1;geneID=comp158198_c0_seq1.path1;Name=comp158198_c0_seq1;Dir=sensecoverage=96.5;identity=98.1;matches=1250;mismatches=10;indels=14;unknowns=0;Target=comp158198_c0_seq1 855 998 +;locus=RLOC_00012721
Chr1	stalkie_big_nohaplotig	exon	154550404	154550697	100	-	.	Parent=comp158198_c0_seq1.mrna1;Target=comp158198_c0_seq1 1003 1296 +
Chr1	stalkie_big_nohaplotig	exon	154550757	154551045	94	-	.	Parent=comp158198_c0_seq1.mrna1;Target=comp158198_c0_seq1 712 1002 +
Chr1	stalkie_big_nohaplotig	exon	154551111	154551203	100	-	.	Parent=comp158198_c0_seq1.mrna1;Target=comp158198_c0_seq1 619 711 +
Chr1	stalkie_big_nohaplotig	exon	154551259	154551848	98	-	.	Parent=comp158198_c0_seq1.mrna1;Target=comp158198_c0_seq1 29 618 +
Chr1	stalkie_big_nohaplotig	CDS	154550761	154550904	.	-	0	Parent=comp158198_c0_seq1.mrna1
Chr1	gffcl	locus	154552432	154553747	.	-	.	ID=RLOC_00012722;geneIDs=comp159185_c0_seq1.path2;transcripts=comp159185_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	154552432	154553747	.	-	.	ID=comp159185_c0_seq1.mrna2;geneID=comp159185_c0_seq1.path2;Name=comp159185_c0_seq1;Dir=antisensecoverage=95.1;identity=98.9;matches=998;mismatches=10;indels=1;unknowns=0;Target=comp159185_c0_seq1 924 1028 .;locus=RLOC_00012722
Chr1	stalkie_big_nohaplotig	exon	154552432	154552787	99	-	.	Parent=comp159185_c0_seq1.mrna2;Target=comp159185_c0_seq1 23 378 -
Chr1	stalkie_big_nohaplotig	exon	154552850	154552963	100	-	.	Parent=comp159185_c0_seq1.mrna2;Target=comp159185_c0_seq1 379 492 -
Chr1	stalkie_big_nohaplotig	exon	154553014	154553215	98	-	.	Parent=comp159185_c0_seq1.mrna2;Target=comp159185_c0_seq1 493 694 -
Chr1	stalkie_big_nohaplotig	exon	154553275	154553338	98	-	.	Parent=comp159185_c0_seq1.mrna2;Target=comp159185_c0_seq1 695 758 -
Chr1	stalkie_big_nohaplotig	exon	154553391	154553489	98	-	.	Parent=comp159185_c0_seq1.mrna2;Target=comp159185_c0_seq1 759 857 -
Chr1	stalkie_big_nohaplotig	exon	154553574	154553747	97	-	.	Parent=comp159185_c0_seq1.mrna2;Target=comp159185_c0_seq1 858 1030 -
Chr1	stalkie_big_nohaplotig	CDS	154553640	154553745	.	-	0	Parent=comp159185_c0_seq1.mrna2
Chr1	gffcl	locus	154554789	154555726	.	-	.	ID=RLOC_00012723;geneIDs=comp153567_c0_seq1.path1;transcripts=comp153567_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154554789	154555726	.	-	.	ID=comp153567_c0_seq1.mrna1;geneID=comp153567_c0_seq1.path1;Name=comp153567_c0_seq1;Dir=antisensecoverage=95.2;identity=99.9;matches=730;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012723
Chr1	stalkie_big_nohaplotig	exon	154554789	154555132	99	-	.	Parent=comp153567_c0_seq1.mrna1;Target=comp153567_c0_seq1 37 380 -
Chr1	stalkie_big_nohaplotig	exon	154555186	154555287	100	-	.	Parent=comp153567_c0_seq1.mrna1;Target=comp153567_c0_seq1 381 482 -
Chr1	stalkie_big_nohaplotig	exon	154555378	154555486	100	-	.	Parent=comp153567_c0_seq1.mrna1;Target=comp153567_c0_seq1 483 591 -
Chr1	stalkie_big_nohaplotig	exon	154555551	154555726	100	-	.	Parent=comp153567_c0_seq1.mrna1;Target=comp153567_c0_seq1 592 767 -
Chr1	stalkie_big_nohaplotig	CDS	154554968	154555132	.	-	0	Parent=comp153567_c0_seq1.mrna1;Target=comp153567_c0_seq1 216 380 .
Chr1	stalkie_big_nohaplotig	CDS	154555186	154555188	.	-	0	Parent=comp153567_c0_seq1.mrna1;Target=comp153567_c0_seq1 381 383 .
Chr1	gffcl	locus	154570355	154571436	.	-	.	ID=RLOC_00012724;geneIDs=comp157936_c0_seq1.path1;transcripts=comp157936_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154570355	154571436	.	-	.	ID=comp157936_c0_seq1.mrna1;geneID=comp157936_c0_seq1.path1;Name=comp157936_c0_seq1;Dir=sensecoverage=98.4;identity=97.5;matches=855;mismatches=15;indels=7;unknowns=0;locus=RLOC_00012724
Chr1	stalkie_big_nohaplotig	exon	154570355	154570719	98	-	.	Parent=comp157936_c0_seq1.mrna1;Target=comp157936_c0_seq1 525 887 +
Chr1	stalkie_big_nohaplotig	exon	154570796	154570861	93	-	.	Parent=comp157936_c0_seq1.mrna1;Target=comp157936_c0_seq1 459 524 +
Chr1	stalkie_big_nohaplotig	exon	154570923	154571196	96	-	.	Parent=comp157936_c0_seq1.mrna1;Target=comp157936_c0_seq1 180 458 +
Chr1	stalkie_big_nohaplotig	exon	154571270	154571436	100	-	.	Parent=comp157936_c0_seq1.mrna1;Target=comp157936_c0_seq1 13 179 +
Chr1	stalkie_big_nohaplotig	CDS	154571032	154571196	.	-	0	Parent=comp157936_c0_seq1.mrna1;Target=comp157936_c0_seq1 180 344 +
Chr1	stalkie_big_nohaplotig	CDS	154571270	154571326	.	-	0	Parent=comp157936_c0_seq1.mrna1;Target=comp157936_c0_seq1 123 179 +
Chr1	gffcl	locus	154573450	154573779	.	+	.	ID=RLOC_00012725;geneIDs=FBgn0000409.2.path1;transcripts=FBgn0000409.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154573450	154573779	.	+	.	ID=FBgn0000409.2.mrna1;geneID=FBgn0000409.2.path1;Name=FBgn0000409.2;Dir=indeterminatecoverage=100.0;identity=98.5;matches=325;mismatches=5;indels=0;unknowns=0;Target=FBgn0000409.2 330 1 .;locus=RLOC_00012725
Chr1	stalkie_big_nohaplotig	exon	154573450	154573779	98	+	.	Parent=FBgn0000409.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	154573450	154573779	.	+	0	Parent=FBgn0000409.2.mrna1
Chr1	gffcl	locus	154660057	154661773	.	-	.	ID=RLOC_00012727;geneIDs=comp162846_c0_seq1.path1;transcripts=comp162846_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154660057	154661773	.	-	.	ID=comp162846_c0_seq1.mrna1;geneID=comp162846_c0_seq1.path1;Name=comp162846_c0_seq1;Dir=sensecoverage=98.3;identity=96.7;matches=1349;mismatches=30;indels=16;unknowns=0;Target=comp162846_c0_seq1 722 844 +;locus=RLOC_00012727
Chr1	stalkie_big_nohaplotig	exon	154660057	154661019	95	-	.	Parent=comp162846_c0_seq1.mrna1;Target=comp162846_c0_seq1 428 1404 +
Chr1	stalkie_big_nohaplotig	exon	154661073	154661164	98	-	.	Parent=comp162846_c0_seq1.mrna1;Target=comp162846_c0_seq1 336 427 +
Chr1	stalkie_big_nohaplotig	exon	154661314	154661363	98	-	.	Parent=comp162846_c0_seq1.mrna1;Target=comp162846_c0_seq1 286 335 +
Chr1	stalkie_big_nohaplotig	exon	154661427	154661546	99	-	.	Parent=comp162846_c0_seq1.mrna1;Target=comp162846_c0_seq1 166 285 +
Chr1	stalkie_big_nohaplotig	exon	154661618	154661773	98	-	.	Parent=comp162846_c0_seq1.mrna1;Target=comp162846_c0_seq1 12 165 +
Chr1	stalkie_big_nohaplotig	CDS	154660610	154660725	.	-	0	Parent=comp162846_c0_seq1.mrna1
Chr1	gffcl	locus	154668370	154684971	.	-	.	ID=RLOC_00012728;geneIDs=FBgn0030913.1.path1;transcripts=FBgn0030913.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154668370	154684971	.	-	.	ID=FBgn0030913.1.mrna1;geneID=FBgn0030913.1.path1;Name=FBgn0030913.1;Dir=sensecoverage=100.0;identity=99.3;matches=1597;mismatches=11;indels=0;unknowns=0;locus=RLOC_00012728
Chr1	stalkie_big_nohaplotig	exon	154668370	154669031	99	-	.	Parent=FBgn0030913.1.mrna1;Target=FBgn0030913.1 947 1608 +
Chr1	stalkie_big_nohaplotig	exon	154683058	154683515	99	-	.	Parent=FBgn0030913.1.mrna1;Target=FBgn0030913.1 489 946 +
Chr1	stalkie_big_nohaplotig	exon	154683592	154684033	99	-	.	Parent=FBgn0030913.1.mrna1;Target=FBgn0030913.1 47 488 +
Chr1	stalkie_big_nohaplotig	exon	154684926	154684971	97	-	.	Parent=FBgn0030913.1.mrna1;Target=FBgn0030913.1 1 46 +
Chr1	stalkie_big_nohaplotig	CDS	154668370	154669031	.	-	2	Parent=FBgn0030913.1.mrna1;Target=FBgn0030913.1 947 1608 +
Chr1	stalkie_big_nohaplotig	CDS	154683058	154683515	.	-	1	Parent=FBgn0030913.1.mrna1;Target=FBgn0030913.1 489 946 +
Chr1	stalkie_big_nohaplotig	CDS	154683592	154684033	.	-	2	Parent=FBgn0030913.1.mrna1;Target=FBgn0030913.1 47 488 +
Chr1	stalkie_big_nohaplotig	CDS	154684926	154684971	.	-	0	Parent=FBgn0030913.1.mrna1;Target=FBgn0030913.1 1 46 +
Chr1	gffcl	locus	154710052	154710081	.	-	.	ID=RLOC_00012729;geneIDs=comp159356_c0_seq1.path2;transcripts=comp159356_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	154710052	154710081	.	-	.	ID=comp159356_c0_seq1.mrna2;geneID=comp159356_c0_seq1.path2;Name=comp159356_c0_seq1;Dir=indeterminatecoverage=3.6;identity=100.0;matches=30;mismatches=0;indels=0;unknowns=0;Target=comp159356_c0_seq1 840 811 .;locus=RLOC_00012729
Chr1	stalkie_big_nohaplotig	exon	154710052	154710081	100	-	.	Parent=comp159356_c0_seq1.mrna2
Chr1	gffcl	locus	154714476	154714805	.	+	.	ID=RLOC_00012730;geneIDs=FBgn0000409.2.path2;transcripts=FBgn0000409.2.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	154714476	154714805	.	+	.	ID=FBgn0000409.2.mrna2;geneID=FBgn0000409.2.path2;Name=FBgn0000409.2;Dir=indeterminatecoverage=100.0;identity=98.5;matches=325;mismatches=5;indels=0;unknowns=0;Target=FBgn0000409.2 330 1 .;locus=RLOC_00012730
Chr1	stalkie_big_nohaplotig	exon	154714476	154714805	98	+	.	Parent=FBgn0000409.2.mrna2
Chr1	stalkie_big_nohaplotig	CDS	154714476	154714805	.	+	0	Parent=FBgn0000409.2.mrna2
Chr1	gffcl	locus	154744996	154745991	.	-	.	ID=RLOC_00012731;geneIDs=FBgn0015024.5.path1;transcripts=FBgn0015024.5.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154744996	154745991	.	-	.	ID=FBgn0015024.5.mrna1;geneID=FBgn0015024.5.path1;Name=FBgn0015024.5;Dir=indeterminatecoverage=100.0;identity=99.0;matches=986;mismatches=10;indels=0;unknowns=0;Target=FBgn0015024.5 996 1 .;CDS_Target=FBgn0015024.5 996 31 .;locus=RLOC_00012731
Chr1	stalkie_big_nohaplotig	exon	154744996	154745991	98	-	.	Parent=FBgn0015024.5.mrna1
Chr1	stalkie_big_nohaplotig	CDS	154744996	154745961	.	-	0	Parent=FBgn0015024.5.mrna1
Chr1	gffcl	locus	154748195	154754072	.	.	.	ID=RLOC_00012732;geneIDs=FBgn0030052.1.path1,comp146813_c2_seq1.path1;transcripts=FBgn0030052.1.mrna1,comp146813_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154748195	154754072	.	+	.	ID=FBgn0030052.1.mrna1;geneID=FBgn0030052.1.path1;Name=FBgn0030052.1;Dir=sensecoverage=100.0;identity=99.8;matches=1635;mismatches=2;indels=1;unknowns=0;locus=RLOC_00012732
Chr1	stalkie_big_nohaplotig	exon	154748195	154748768	100	+	.	Parent=FBgn0030052.1.mrna1;Target=FBgn0030052.1 1 574 +
Chr1	stalkie_big_nohaplotig	exon	154748846	154748965	100	+	.	Parent=FBgn0030052.1.mrna1;Target=FBgn0030052.1 575 694 +
Chr1	stalkie_big_nohaplotig	exon	154749238	154749318	100	+	.	Parent=FBgn0030052.1.mrna1;Target=FBgn0030052.1 695 775 +
Chr1	stalkie_big_nohaplotig	exon	154752146	154752254	99	+	.	Parent=FBgn0030052.1.mrna1;Target=FBgn0030052.1 776 884 +
Chr1	stalkie_big_nohaplotig	exon	154752589	154752712	100	+	.	Parent=FBgn0030052.1.mrna1;Target=FBgn0030052.1 885 1008 +
Chr1	stalkie_big_nohaplotig	exon	154752776	154752911	100	+	.	Parent=FBgn0030052.1.mrna1;Target=FBgn0030052.1 1009 1144 +
Chr1	stalkie_big_nohaplotig	exon	154753142	154753192	100	+	.	Parent=FBgn0030052.1.mrna1;Target=FBgn0030052.1 1145 1195 +
Chr1	stalkie_big_nohaplotig	exon	154753574	154753838	99	+	.	Parent=FBgn0030052.1.mrna1;Target=FBgn0030052.1 1196 1460 +
Chr1	stalkie_big_nohaplotig	exon	154753896	154754072	99	+	.	Parent=FBgn0030052.1.mrna1;Target=FBgn0030052.1 1461 1638 +
Chr1	stalkie_big_nohaplotig	CDS	154748195	154748768	.	+	0	Parent=FBgn0030052.1.mrna1;Target=FBgn0030052.1 1 574 +
Chr1	stalkie_big_nohaplotig	CDS	154748846	154748965	.	+	2	Parent=FBgn0030052.1.mrna1;Target=FBgn0030052.1 575 694 +
Chr1	stalkie_big_nohaplotig	CDS	154749238	154749318	.	+	2	Parent=FBgn0030052.1.mrna1;Target=FBgn0030052.1 695 775 +
Chr1	stalkie_big_nohaplotig	CDS	154752146	154752254	.	+	2	Parent=FBgn0030052.1.mrna1;Target=FBgn0030052.1 776 884 +
Chr1	stalkie_big_nohaplotig	CDS	154752589	154752712	.	+	1	Parent=FBgn0030052.1.mrna1;Target=FBgn0030052.1 885 1008 +
Chr1	stalkie_big_nohaplotig	CDS	154752776	154752911	.	+	0	Parent=FBgn0030052.1.mrna1;Target=FBgn0030052.1 1009 1144 +
Chr1	stalkie_big_nohaplotig	CDS	154753142	154753192	.	+	2	Parent=FBgn0030052.1.mrna1;Target=FBgn0030052.1 1145 1195 +
Chr1	stalkie_big_nohaplotig	CDS	154753574	154753838	.	+	2	Parent=FBgn0030052.1.mrna1;Target=FBgn0030052.1 1196 1460 +
Chr1	stalkie_big_nohaplotig	CDS	154753896	154754072	.	+	1	Parent=FBgn0030052.1.mrna1;Target=FBgn0030052.1 1461 1638 +
Chr1	stalkie_big_nohaplotig	mRNA	154753171	154753595	.	-	.	ID=comp146813_c2_seq1.mrna1;geneID=comp146813_c2_seq1.path1;Name=comp146813_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=424;mismatches=1;indels=3;unknowns=0;Target=comp146813_c2_seq1 428 1 .;CDS_Target=comp146813_c2_seq1 325 215 .;locus=RLOC_00012732
Chr1	stalkie_big_nohaplotig	exon	154753171	154753595	99	-	.	Parent=comp146813_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	154753274	154753384	.	-	0	Parent=comp146813_c2_seq1.mrna1
Chr1	gffcl	locus	154750268	154750960	.	-	.	ID=RLOC_00012733;geneIDs=comp153798_c0_seq1.path1;transcripts=comp153798_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154750268	154750960	.	-	.	ID=comp153798_c0_seq1.mrna1;geneID=comp153798_c0_seq1.path1;Name=comp153798_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=683;mismatches=10;indels=7;unknowns=0;Target=comp153798_c0_seq1 700 1 .;CDS_Target=comp153798_c0_seq1 63 1 .;locus=RLOC_00012733
Chr1	stalkie_big_nohaplotig	exon	154750268	154750960	97	-	.	Parent=comp153798_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	154750898	154750960	.	-	0	Parent=comp153798_c0_seq1.mrna1
Chr1	gffcl	locus	154765256	154781934	.	+	.	ID=RLOC_00012735;geneIDs=comp139783_c1_seq1.path1;transcripts=comp139783_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154765256	154781934	.	+	.	ID=comp139783_c1_seq1.mrna1;geneID=comp139783_c1_seq1.path1;Name=comp139783_c1_seq1;Dir=indeterminatecoverage=74.0;identity=93.1;matches=603;mismatches=21;indels=24;unknowns=0;Target=comp139783_c1_seq1 523 449 .;locus=RLOC_00012735
Chr1	stalkie_big_nohaplotig	exon	154765256	154765262	100	+	.	Parent=comp139783_c1_seq1.mrna1;Target=comp139783_c1_seq1 249 243 .
Chr1	stalkie_big_nohaplotig	exon	154765443	154765452	100	+	.	Parent=comp139783_c1_seq1.mrna1;Target=comp139783_c1_seq1 259 250 .
Chr1	stalkie_big_nohaplotig	exon	154770923	154770955	42	+	.	Parent=comp139783_c1_seq1.mrna1;Target=comp139783_c1_seq1 278 260 .
Chr1	stalkie_big_nohaplotig	exon	154771143	154771152	90	+	.	Parent=comp139783_c1_seq1.mrna1;Target=comp139783_c1_seq1 288 279 .
Chr1	stalkie_big_nohaplotig	exon	154771522	154771534	73	+	.	Parent=comp139783_c1_seq1.mrna1;Target=comp139783_c1_seq1 303 289 .
Chr1	stalkie_big_nohaplotig	exon	154776692	154776721	67	+	.	Parent=comp139783_c1_seq1.mrna1;Target=comp139783_c1_seq1 337 304 .
Chr1	stalkie_big_nohaplotig	exon	154781401	154781934	98	+	.	Parent=comp139783_c1_seq1.mrna1;Target=comp139783_c1_seq1 931 394 .
Chr1	stalkie_big_nohaplotig	CDS	154781456	154781526	.	+	0	Parent=comp139783_c1_seq1.mrna1
Chr1	gffcl	locus	154765745	154768825	.	-	.	ID=RLOC_00012736;geneIDs=FBgn0015336.path1;transcripts=FBgn0015336.mrna1,FBgn0015336.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154765745	154767128	.	-	.	ID=FBgn0015336.mrna1;geneID=FBgn0015336.path1;Name=FBgn0015336;Dir=sensecoverage=100.0;identity=99.9;matches=1322;mismatches=0;indels=1;unknowns=0;locus=RLOC_00012736
Chr1	stalkie_big_nohaplotig	exon	154765745	154767128	.	-	.	Parent=FBgn0015336.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154765745	154768825	.	-	.	ID=FBgn0015336.mrna1;geneID=FBgn0015336.path1;Name=FBgn0015336;Dir=sensecoverage=99.9;identity=99.8;matches=1609;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012736
Chr1	stalkie_big_nohaplotig	exon	154765745	154766733	99	-	.	Parent=FBgn0015336.mrna1;Target=FBgn0015336 334 1323 +
Chr1	stalkie_big_nohaplotig	exon	154766796	154768572	99	-	.	Parent=FBgn0015336.mrna1;Target=FBgn0015336 1 333 +
Chr1	stalkie_big_nohaplotig	exon	154768662	154768825	99	-	.	Parent=FBgn0015336.mrna1;Target=FBgn0015336 1 164 +
Chr1	stalkie_big_nohaplotig	CDS	154765745	154766733	99	-	0	Parent=FBgn0015336.mrna1;Target=FBgn0015336 334 1323 +
Chr1	stalkie_big_nohaplotig	CDS	154766796	154767128	100	-	0	Parent=FBgn0015336.mrna1;Target=FBgn0015336 1 333 +
Chr1	stalkie_big_nohaplotig	CDS	154767126	154768572	99	-	2	Parent=FBgn0015336.mrna1;Target=FBgn0015336 165 1611 +
Chr1	stalkie_big_nohaplotig	CDS	154768662	154768825	99	-	0	Parent=FBgn0015336.mrna1;Target=FBgn0015336 1 164 +
Chr1	gffcl	locus	154776942	154777533	.	-	.	ID=RLOC_00012737;geneIDs=comp149328_c0_seq1.path1;transcripts=comp149328_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154776942	154777533	.	-	.	ID=comp149328_c0_seq1.mrna1;geneID=comp149328_c0_seq1.path1;Name=comp149328_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.6;matches=566;mismatches=10;indels=16;unknowns=0;Target=comp149328_c0_seq1 576 1 .;CDS_Target=comp149328_c0_seq1 237 139 .;locus=RLOC_00012737
Chr1	stalkie_big_nohaplotig	exon	154776942	154777533	95	-	.	Parent=comp149328_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	154777297	154777395	.	-	0	Parent=comp149328_c0_seq1.mrna1
Chr1	gffcl	locus	154787919	154788330	.	+	.	ID=RLOC_00012738;geneIDs=comp145268_c0_seq1.path1;transcripts=comp145268_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154787919	154788330	.	+	.	ID=comp145268_c0_seq1.mrna1;geneID=comp145268_c0_seq1.path1;Name=comp145268_c0_seq1;Dir=indeterminatecoverage=97.4;identity=97.8;matches=404;mismatches=6;indels=3;unknowns=0;Target=comp145268_c0_seq1 412 2 .;CDS_Target=comp145268_c0_seq1 244 197 .;locus=RLOC_00012738
Chr1	stalkie_big_nohaplotig	exon	154787919	154788330	97	+	.	Parent=comp145268_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	154788116	154788163	.	+	0	Parent=comp145268_c0_seq1.mrna1
Chr1	gffcl	locus	154808500	154809196	.	-	.	ID=RLOC_00012739;geneIDs=comp150428_c0_seq1.path1;transcripts=comp150428_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154808500	154809196	.	-	.	ID=comp150428_c0_seq1.mrna1;geneID=comp150428_c0_seq1.path1;Name=comp150428_c0_seq1;Dir=antisensecoverage=97.3;identity=99.5;matches=583;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012739
Chr1	stalkie_big_nohaplotig	exon	154808500	154808745	99	-	.	Parent=comp150428_c0_seq1.mrna1;Target=comp150428_c0_seq1 17 262 -
Chr1	stalkie_big_nohaplotig	exon	154808799	154808990	99	-	.	Parent=comp150428_c0_seq1.mrna1;Target=comp150428_c0_seq1 263 454 -
Chr1	stalkie_big_nohaplotig	exon	154809049	154809196	100	-	.	Parent=comp150428_c0_seq1.mrna1;Target=comp150428_c0_seq1 455 602 -
Chr1	stalkie_big_nohaplotig	CDS	154808799	154808990	.	-	0	Parent=comp150428_c0_seq1.mrna1;Target=comp150428_c0_seq1 263 454 .
Chr1	stalkie_big_nohaplotig	CDS	154809049	154809093	.	-	0	Parent=comp150428_c0_seq1.mrna1;Target=comp150428_c0_seq1 455 499 .
Chr1	gffcl	locus	154810674	154811603	.	-	.	ID=RLOC_00012740;geneIDs=comp153443_c0_seq1.path1;transcripts=comp153443_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154810674	154811603	.	-	.	ID=comp153443_c0_seq1.mrna1;geneID=comp153443_c0_seq1.path1;Name=comp153443_c0_seq1;Dir=antisensecoverage=99.9;identity=99.6;matches=777;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012740
Chr1	stalkie_big_nohaplotig	exon	154810674	154811062	99	-	.	Parent=comp153443_c0_seq1.mrna1;Target=comp153443_c0_seq1 2 390 -
Chr1	stalkie_big_nohaplotig	exon	154811143	154811322	100	-	.	Parent=comp153443_c0_seq1.mrna1;Target=comp153443_c0_seq1 391 570 -
Chr1	stalkie_big_nohaplotig	exon	154811393	154811603	100	-	.	Parent=comp153443_c0_seq1.mrna1;Target=comp153443_c0_seq1 571 781 -
Chr1	stalkie_big_nohaplotig	CDS	154810853	154811062	.	-	0	Parent=comp153443_c0_seq1.mrna1;Target=comp153443_c0_seq1 181 390 .
Chr1	stalkie_big_nohaplotig	CDS	154811143	154811322	.	-	0	Parent=comp153443_c0_seq1.mrna1;Target=comp153443_c0_seq1 391 570 .
Chr1	stalkie_big_nohaplotig	CDS	154811393	154811443	.	-	0	Parent=comp153443_c0_seq1.mrna1;Target=comp153443_c0_seq1 571 621 .
Chr1	gffcl	locus	154816539	154819014	.	-	.	ID=RLOC_00012741;geneIDs=FBgn0000152.1.path1;transcripts=FBgn0000152.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154816539	154819014	.	-	.	ID=FBgn0000152.1.mrna1;geneID=FBgn0000152.1.path1;Name=FBgn0000152.1;Dir=sensecoverage=100.0;identity=99.5;matches=1893;mismatches=9;indels=0;unknowns=0;locus=RLOC_00012741
Chr1	stalkie_big_nohaplotig	exon	154816539	154816566	100	-	.	Parent=FBgn0000152.1.mrna1;Target=FBgn0000152.1 1875 1902 +
Chr1	stalkie_big_nohaplotig	exon	154816633	154816809	99	-	.	Parent=FBgn0000152.1.mrna1;Target=FBgn0000152.1 1698 1874 +
Chr1	stalkie_big_nohaplotig	exon	154816876	154817009	98	-	.	Parent=FBgn0000152.1.mrna1;Target=FBgn0000152.1 1564 1697 +
Chr1	stalkie_big_nohaplotig	exon	154817090	154817386	100	-	.	Parent=FBgn0000152.1.mrna1;Target=FBgn0000152.1 1267 1563 +
Chr1	stalkie_big_nohaplotig	exon	154817443	154817708	99	-	.	Parent=FBgn0000152.1.mrna1;Target=FBgn0000152.1 1001 1266 +
Chr1	stalkie_big_nohaplotig	exon	154817765	154818038	99	-	.	Parent=FBgn0000152.1.mrna1;Target=FBgn0000152.1 727 1000 +
Chr1	stalkie_big_nohaplotig	exon	154818109	154818321	99	-	.	Parent=FBgn0000152.1.mrna1;Target=FBgn0000152.1 514 726 +
Chr1	stalkie_big_nohaplotig	exon	154818377	154818647	100	-	.	Parent=FBgn0000152.1.mrna1;Target=FBgn0000152.1 243 513 +
Chr1	stalkie_big_nohaplotig	exon	154818721	154818827	100	-	.	Parent=FBgn0000152.1.mrna1;Target=FBgn0000152.1 136 242 +
Chr1	stalkie_big_nohaplotig	exon	154818880	154819014	98	-	.	Parent=FBgn0000152.1.mrna1;Target=FBgn0000152.1 1 135 +
Chr1	stalkie_big_nohaplotig	CDS	154816539	154816566	.	-	1	Parent=FBgn0000152.1.mrna1;Target=FBgn0000152.1 1875 1902 +
Chr1	stalkie_big_nohaplotig	CDS	154816633	154816809	.	-	1	Parent=FBgn0000152.1.mrna1;Target=FBgn0000152.1 1698 1874 +
Chr1	stalkie_big_nohaplotig	CDS	154816876	154817009	.	-	0	Parent=FBgn0000152.1.mrna1;Target=FBgn0000152.1 1564 1697 +
Chr1	stalkie_big_nohaplotig	CDS	154817090	154817386	.	-	0	Parent=FBgn0000152.1.mrna1;Target=FBgn0000152.1 1267 1563 +
Chr1	stalkie_big_nohaplotig	CDS	154817443	154817708	.	-	2	Parent=FBgn0000152.1.mrna1;Target=FBgn0000152.1 1001 1266 +
Chr1	stalkie_big_nohaplotig	CDS	154817765	154818038	.	-	0	Parent=FBgn0000152.1.mrna1;Target=FBgn0000152.1 727 1000 +
Chr1	stalkie_big_nohaplotig	CDS	154818109	154818321	.	-	0	Parent=FBgn0000152.1.mrna1;Target=FBgn0000152.1 514 726 +
Chr1	stalkie_big_nohaplotig	CDS	154818377	154818647	.	-	1	Parent=FBgn0000152.1.mrna1;Target=FBgn0000152.1 243 513 +
Chr1	stalkie_big_nohaplotig	CDS	154818721	154818827	.	-	0	Parent=FBgn0000152.1.mrna1;Target=FBgn0000152.1 136 242 +
Chr1	stalkie_big_nohaplotig	CDS	154818880	154819014	.	-	0	Parent=FBgn0000152.1.mrna1;Target=FBgn0000152.1 1 135 +
Chr1	gffcl	locus	154820052	154823077	.	+	.	ID=RLOC_00012742;geneIDs=FBgn0030037.1.path1;transcripts=FBgn0030037.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154820052	154823077	.	+	.	ID=FBgn0030037.1.mrna1;geneID=FBgn0030037.1.path1;Name=FBgn0030037.1;Dir=sensecoverage=100.0;identity=99.6;matches=1589;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012742
Chr1	stalkie_big_nohaplotig	exon	154820052	154820138	100	+	.	Parent=FBgn0030037.1.mrna1;Target=FBgn0030037.1 1 87 +
Chr1	stalkie_big_nohaplotig	exon	154820203	154821096	99	+	.	Parent=FBgn0030037.1.mrna1;Target=FBgn0030037.1 88 981 +
Chr1	stalkie_big_nohaplotig	exon	154821166	154821474	99	+	.	Parent=FBgn0030037.1.mrna1;Target=FBgn0030037.1 982 1290 +
Chr1	stalkie_big_nohaplotig	exon	154822772	154823077	99	+	.	Parent=FBgn0030037.1.mrna1;Target=FBgn0030037.1 1291 1596 +
Chr1	stalkie_big_nohaplotig	CDS	154820052	154820138	.	+	0	Parent=FBgn0030037.1.mrna1;Target=FBgn0030037.1 1 87 +
Chr1	stalkie_big_nohaplotig	CDS	154820203	154821096	.	+	0	Parent=FBgn0030037.1.mrna1;Target=FBgn0030037.1 88 981 +
Chr1	stalkie_big_nohaplotig	CDS	154821166	154821474	.	+	0	Parent=FBgn0030037.1.mrna1;Target=FBgn0030037.1 982 1290 +
Chr1	stalkie_big_nohaplotig	CDS	154822772	154823077	.	+	0	Parent=FBgn0030037.1.mrna1;Target=FBgn0030037.1 1291 1596 +
Chr1	gffcl	locus	154823755	154824890	.	+	.	ID=RLOC_00012743;geneIDs=comp148639_c0_seq1.path1;transcripts=comp148639_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154823755	154824890	.	+	.	ID=comp148639_c0_seq1.mrna1;geneID=comp148639_c0_seq1.path1;Name=comp148639_c0_seq1;Dir=sensecoverage=99.8;identity=100.0;matches=994;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012743
Chr1	stalkie_big_nohaplotig	exon	154823755	154823981	100	+	.	Parent=comp148639_c0_seq1.mrna1;Target=comp148639_c0_seq1 1 227 +
Chr1	stalkie_big_nohaplotig	exon	154824061	154824240	100	+	.	Parent=comp148639_c0_seq1.mrna1;Target=comp148639_c0_seq1 228 407 +
Chr1	stalkie_big_nohaplotig	exon	154824304	154824890	100	+	.	Parent=comp148639_c0_seq1.mrna1;Target=comp148639_c0_seq1 408 994 +
Chr1	stalkie_big_nohaplotig	CDS	154823925	154823981	.	+	0	Parent=comp148639_c0_seq1.mrna1;Target=comp148639_c0_seq1 171 227 +
Chr1	stalkie_big_nohaplotig	CDS	154824061	154824240	.	+	0	Parent=comp148639_c0_seq1.mrna1;Target=comp148639_c0_seq1 228 407 +
Chr1	stalkie_big_nohaplotig	CDS	154824304	154824567	.	+	0	Parent=comp148639_c0_seq1.mrna1;Target=comp148639_c0_seq1 408 671 +
Chr1	gffcl	locus	154827570	154829547	.	-	.	ID=RLOC_00012744;geneIDs=FBgn0030309.1.path1;transcripts=FBgn0030309.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154827570	154829547	.	-	.	ID=FBgn0030309.1.mrna1;geneID=FBgn0030309.1.path1;Name=FBgn0030309.1;Dir=sensecoverage=100.0;identity=98.8;matches=501;mismatches=6;indels=0;unknowns=0;locus=RLOC_00012744
Chr1	stalkie_big_nohaplotig	exon	154827570	154827764	99	-	.	Parent=FBgn0030309.1.mrna1;Target=FBgn0030309.1 313 507 +
Chr1	stalkie_big_nohaplotig	exon	154827833	154828018	97	-	.	Parent=FBgn0030309.1.mrna1;Target=FBgn0030309.1 127 312 +
Chr1	stalkie_big_nohaplotig	exon	154829422	154829547	99	-	.	Parent=FBgn0030309.1.mrna1;Target=FBgn0030309.1 1 126 +
Chr1	stalkie_big_nohaplotig	CDS	154827570	154827764	.	-	0	Parent=FBgn0030309.1.mrna1;Target=FBgn0030309.1 313 507 +
Chr1	stalkie_big_nohaplotig	CDS	154827833	154828018	.	-	0	Parent=FBgn0030309.1.mrna1;Target=FBgn0030309.1 127 312 +
Chr1	stalkie_big_nohaplotig	CDS	154829422	154829547	.	-	0	Parent=FBgn0030309.1.mrna1;Target=FBgn0030309.1 1 126 +
Chr1	gffcl	locus	154828237	154828642	.	+	.	ID=RLOC_00012745;geneIDs=comp163731_c1_seq1.path1;transcripts=comp163731_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154828237	154828642	.	+	.	ID=comp163731_c1_seq1.mrna1;geneID=comp163731_c1_seq1.path1;Name=comp163731_c1_seq1;Dir=indeterminatecoverage=7.4;identity=97.1;matches=399;mismatches=7;indels=5;unknowns=0;Target=comp163731_c1_seq1 850 440 .;locus=RLOC_00012745
Chr1	stalkie_big_nohaplotig	exon	154828237	154828642	97	+	.	Parent=comp163731_c1_seq1.mrna1
Chr1	gffcl	locus	154842161	154843798	.	-	.	ID=RLOC_00012746;geneIDs=FBgn0029676.1.path1;transcripts=FBgn0029676.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154842161	154843798	.	-	.	ID=FBgn0029676.1.mrna1;geneID=FBgn0029676.1.path1;Name=FBgn0029676.1;Dir=sensecoverage=100.0;identity=100.0;matches=1218;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012746
Chr1	stalkie_big_nohaplotig	exon	154842161	154843083	100	-	.	Parent=FBgn0029676.1.mrna1;Target=FBgn0029676.1 296 1218 +
Chr1	stalkie_big_nohaplotig	exon	154843444	154843559	100	-	.	Parent=FBgn0029676.1.mrna1;Target=FBgn0029676.1 180 295 +
Chr1	stalkie_big_nohaplotig	exon	154843620	154843798	100	-	.	Parent=FBgn0029676.1.mrna1;Target=FBgn0029676.1 1 179 +
Chr1	stalkie_big_nohaplotig	CDS	154842161	154843083	.	-	2	Parent=FBgn0029676.1.mrna1;Target=FBgn0029676.1 296 1218 +
Chr1	stalkie_big_nohaplotig	CDS	154843444	154843559	.	-	1	Parent=FBgn0029676.1.mrna1;Target=FBgn0029676.1 180 295 +
Chr1	stalkie_big_nohaplotig	CDS	154843620	154843798	.	-	0	Parent=FBgn0029676.1.mrna1;Target=FBgn0029676.1 1 179 +
Chr1	gffcl	locus	154845865	154846855	.	+	.	ID=RLOC_00012747;geneIDs=FBgn0261882.1.path1;transcripts=FBgn0261882.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154845865	154846855	.	+	.	ID=FBgn0261882.1.mrna1;geneID=FBgn0261882.1.path1;Name=FBgn0261882.1;Dir=sensecoverage=100.0;identity=99.1;matches=928;mismatches=8;indels=0;unknowns=0;locus=RLOC_00012747
Chr1	stalkie_big_nohaplotig	exon	154845865	154846081	99	+	.	Parent=FBgn0261882.1.mrna1;Target=FBgn0261882.1 1 217 +
Chr1	stalkie_big_nohaplotig	exon	154846137	154846855	99	+	.	Parent=FBgn0261882.1.mrna1;Target=FBgn0261882.1 218 936 +
Chr1	stalkie_big_nohaplotig	CDS	154845865	154846081	.	+	0	Parent=FBgn0261882.1.mrna1;Target=FBgn0261882.1 1 217 +
Chr1	stalkie_big_nohaplotig	CDS	154846137	154846855	.	+	2	Parent=FBgn0261882.1.mrna1;Target=FBgn0261882.1 218 936 +
Chr1	gffcl	locus	154847027	154847690	.	-	.	ID=RLOC_00012748;geneIDs=FBgn0028926.1.path1;transcripts=FBgn0028926.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154847027	154847690	.	-	.	ID=FBgn0028926.1.mrna1;geneID=FBgn0028926.1.path1;Name=FBgn0028926.1;Dir=sensecoverage=100.0;identity=99.0;matches=597;mismatches=6;indels=0;unknowns=0;locus=RLOC_00012748
Chr1	stalkie_big_nohaplotig	exon	154847027	154847455	98	-	.	Parent=FBgn0028926.1.mrna1;Target=FBgn0028926.1 175 603 +
Chr1	stalkie_big_nohaplotig	exon	154847517	154847690	99	-	.	Parent=FBgn0028926.1.mrna1;Target=FBgn0028926.1 1 174 +
Chr1	stalkie_big_nohaplotig	CDS	154847027	154847455	.	-	0	Parent=FBgn0028926.1.mrna1;Target=FBgn0028926.1 175 603 +
Chr1	stalkie_big_nohaplotig	CDS	154847517	154847690	.	-	0	Parent=FBgn0028926.1.mrna1;Target=FBgn0028926.1 1 174 +
Chr1	gffcl	locus	154847978	154849018	.	+	.	ID=RLOC_00012749;geneIDs=FBgn0020235.1.path1;transcripts=FBgn0020235.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154847978	154849018	.	+	.	ID=FBgn0020235.1.mrna1;geneID=FBgn0020235.1.path1;Name=FBgn0020235.1;Dir=sensecoverage=100.0;identity=99.8;matches=964;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012749
Chr1	stalkie_big_nohaplotig	exon	154847978	154848019	100	+	.	Parent=FBgn0020235.1.mrna1;Target=FBgn0020235.1 1 42 +
Chr1	stalkie_big_nohaplotig	exon	154848095	154849018	99	+	.	Parent=FBgn0020235.1.mrna1;Target=FBgn0020235.1 43 966 +
Chr1	stalkie_big_nohaplotig	CDS	154847978	154848019	.	+	0	Parent=FBgn0020235.1.mrna1;Target=FBgn0020235.1 1 42 +
Chr1	stalkie_big_nohaplotig	CDS	154848095	154849018	.	+	0	Parent=FBgn0020235.1.mrna1;Target=FBgn0020235.1 43 966 +
Chr1	gffcl	locus	154852658	154856263	.	-	.	ID=RLOC_00012750;geneIDs=FBgn0019925.1.path1;transcripts=FBgn0019925.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154852658	154856263	.	-	.	ID=FBgn0019925.1.mrna1;geneID=FBgn0019925.1.path1;Name=FBgn0019925.1;Dir=sensecoverage=100.0;identity=100.0;matches=822;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012750
Chr1	stalkie_big_nohaplotig	exon	154852658	154852741	100	-	.	Parent=FBgn0019925.1.mrna1;Target=FBgn0019925.1 739 822 +
Chr1	stalkie_big_nohaplotig	exon	154852811	154852990	100	-	.	Parent=FBgn0019925.1.mrna1;Target=FBgn0019925.1 559 738 +
Chr1	stalkie_big_nohaplotig	exon	154853059	154853289	100	-	.	Parent=FBgn0019925.1.mrna1;Target=FBgn0019925.1 328 558 +
Chr1	stalkie_big_nohaplotig	exon	154853368	154853631	100	-	.	Parent=FBgn0019925.1.mrna1;Target=FBgn0019925.1 64 327 +
Chr1	stalkie_big_nohaplotig	exon	154856201	154856263	100	-	.	Parent=FBgn0019925.1.mrna1;Target=FBgn0019925.1 1 63 +
Chr1	stalkie_big_nohaplotig	CDS	154852658	154852741	.	-	0	Parent=FBgn0019925.1.mrna1;Target=FBgn0019925.1 739 822 +
Chr1	stalkie_big_nohaplotig	CDS	154852811	154852990	.	-	0	Parent=FBgn0019925.1.mrna1;Target=FBgn0019925.1 559 738 +
Chr1	stalkie_big_nohaplotig	CDS	154853059	154853289	.	-	0	Parent=FBgn0019925.1.mrna1;Target=FBgn0019925.1 328 558 +
Chr1	stalkie_big_nohaplotig	CDS	154853368	154853631	.	-	0	Parent=FBgn0019925.1.mrna1;Target=FBgn0019925.1 64 327 +
Chr1	stalkie_big_nohaplotig	CDS	154856201	154856263	.	-	0	Parent=FBgn0019925.1.mrna1;Target=FBgn0019925.1 1 63 +
Chr1	gffcl	locus	154857499	154859492	.	+	.	ID=RLOC_00012751;geneIDs=comp146152_c0_seq1.path1;transcripts=comp146152_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154857499	154859492	.	+	.	ID=comp146152_c0_seq1.mrna1;geneID=comp146152_c0_seq1.path1;Name=comp146152_c0_seq1;Dir=indeterminatecoverage=93.8;identity=99.9;matches=1706;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012751
Chr1	stalkie_big_nohaplotig	exon	154857499	154857950	99	+	.	Parent=comp146152_c0_seq1.mrna1;Target=comp146152_c0_seq1 463 12 .
Chr1	stalkie_big_nohaplotig	exon	154858021	154858146	100	+	.	Parent=comp146152_c0_seq1.mrna1;Target=comp146152_c0_seq1 589 464 .
Chr1	stalkie_big_nohaplotig	exon	154858258	154859350	100	+	.	Parent=comp146152_c0_seq1.mrna1;Target=comp146152_c0_seq1 1682 590 .
Chr1	stalkie_big_nohaplotig	exon	154859456	154859492	100	+	.	Parent=comp146152_c0_seq1.mrna1;Target=comp146152_c0_seq1 1719 1683 .
Chr1	stalkie_big_nohaplotig	CDS	154857742	154857950	.	+	0	Parent=comp146152_c0_seq1.mrna1;Target=comp146152_c0_seq1 463 255 .
Chr1	stalkie_big_nohaplotig	CDS	154858021	154858146	.	+	1	Parent=comp146152_c0_seq1.mrna1;Target=comp146152_c0_seq1 589 464 .
Chr1	stalkie_big_nohaplotig	CDS	154858258	154858321	.	+	1	Parent=comp146152_c0_seq1.mrna1;Target=comp146152_c0_seq1 653 590 .
Chr1	gffcl	locus	154860828	154861830	.	+	.	ID=RLOC_00012752;geneIDs=FBgn0030479.1.path1;transcripts=FBgn0030479.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154860828	154861830	.	+	.	ID=FBgn0030479.1.mrna1;geneID=FBgn0030479.1.path1;Name=FBgn0030479.1;Dir=sensecoverage=100.0;identity=99.9;matches=680;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012752
Chr1	stalkie_big_nohaplotig	exon	154860828	154861069	99	+	.	Parent=FBgn0030479.1.mrna1;Target=FBgn0030479.1 1 242 +
Chr1	stalkie_big_nohaplotig	exon	154861133	154861285	100	+	.	Parent=FBgn0030479.1.mrna1;Target=FBgn0030479.1 243 395 +
Chr1	stalkie_big_nohaplotig	exon	154861545	154861830	100	+	.	Parent=FBgn0030479.1.mrna1;Target=FBgn0030479.1 396 681 +
Chr1	stalkie_big_nohaplotig	CDS	154860828	154861069	.	+	0	Parent=FBgn0030479.1.mrna1;Target=FBgn0030479.1 1 242 +
Chr1	stalkie_big_nohaplotig	CDS	154861133	154861285	.	+	1	Parent=FBgn0030479.1.mrna1;Target=FBgn0030479.1 243 395 +
Chr1	stalkie_big_nohaplotig	CDS	154861545	154861830	.	+	1	Parent=FBgn0030479.1.mrna1;Target=FBgn0030479.1 396 681 +
Chr1	gffcl	locus	154866166	154867041	.	-	.	ID=RLOC_00012753;geneIDs=comp145355_c0_seq1.path1;transcripts=comp145355_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154866166	154867041	.	-	.	ID=comp145355_c0_seq1.mrna1;geneID=comp145355_c0_seq1.path1;Name=comp145355_c0_seq1;Dir=antisensecoverage=99.0;identity=98.2;matches=672;mismatches=7;indels=5;unknowns=0;locus=RLOC_00012753
Chr1	stalkie_big_nohaplotig	exon	154866166	154866521	96	-	.	Parent=comp145355_c0_seq1.mrna1;Target=comp145355_c0_seq1 1 357 -
Chr1	stalkie_big_nohaplotig	exon	154866583	154866670	100	-	.	Parent=comp145355_c0_seq1.mrna1;Target=comp145355_c0_seq1 358 445 -
Chr1	stalkie_big_nohaplotig	exon	154866805	154867041	100	-	.	Parent=comp145355_c0_seq1.mrna1;Target=comp145355_c0_seq1 446 682 -
Chr1	stalkie_big_nohaplotig	CDS	154866361	154866521	.	-	2	Parent=comp145355_c0_seq1.mrna1;Target=comp145355_c0_seq1 197 357 .
Chr1	stalkie_big_nohaplotig	CDS	154866583	154866670	.	-	0	Parent=comp145355_c0_seq1.mrna1;Target=comp145355_c0_seq1 358 445 .
Chr1	stalkie_big_nohaplotig	CDS	154866805	154867041	.	-	0	Parent=comp145355_c0_seq1.mrna1;Target=comp145355_c0_seq1 446 682 .
Chr1	gffcl	locus	154868026	154868292	.	+	.	ID=RLOC_00012754;geneIDs=FBgn0022224.1.path1;transcripts=FBgn0022224.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154868026	154868292	.	+	.	ID=FBgn0022224.1.mrna1;geneID=FBgn0022224.1.path1;Name=FBgn0022224.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=267;mismatches=0;indels=0;unknowns=0;Target=FBgn0022224.1 267 1 .;locus=RLOC_00012754
Chr1	stalkie_big_nohaplotig	exon	154868026	154868292	100	+	.	Parent=FBgn0022224.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	154868026	154868292	.	+	0	Parent=FBgn0022224.1.mrna1
Chr1	gffcl	locus	154874597	154875902	.	.	.	ID=RLOC_00012755;geneIDs=Beta.path1,comp161706_c0_seq1.path1;transcripts=comp161706_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154874597	154875902	.	+	.	ID=comp161706_c0_seq1.mrna1;geneID=comp161706_c0_seq1.path1;Name=comp161706_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.0;matches=1293;mismatches=13;indels=0;unknowns=0;Target=comp161706_c0_seq1 1306 1 .;CDS_Target=comp161706_c0_seq1 472 332 .;locus=RLOC_00012755
Chr1	stalkie_big_nohaplotig	exon	154874597	154875902	99	+	.	Parent=comp161706_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	154874928	154875068	.	+	0	Parent=comp161706_c0_seq1.mrna1
Chr1	gffcl	locus	154944799	154952273	.	-	.	ID=RLOC_00012756;geneIDs=comp159969_c1_seq1.path1;transcripts=comp159969_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154944799	154952273	.	-	.	ID=comp159969_c1_seq1.mrna1;geneID=comp159969_c1_seq1.path1;Name=comp159969_c1_seq1;Dir=indeterminatecoverage=99.3;identity=94.7;matches=1156;mismatches=50;indels=15;unknowns=0;Target=comp159969_c1_seq1 733 533 .;locus=RLOC_00012756
Chr1	stalkie_big_nohaplotig	exon	154944799	154944934	92	-	.	Parent=comp159969_c1_seq1.mrna1;Target=comp159969_c1_seq1 1218 1080 .
Chr1	stalkie_big_nohaplotig	exon	154945012	154945124	89	-	.	Parent=comp159969_c1_seq1.mrna1;Target=comp159969_c1_seq1 1079 967 .
Chr1	stalkie_big_nohaplotig	exon	154945183	154945298	84	-	.	Parent=comp159969_c1_seq1.mrna1;Target=comp159969_c1_seq1 966 845 .
Chr1	stalkie_big_nohaplotig	exon	154945425	154945812	94	-	.	Parent=comp159969_c1_seq1.mrna1;Target=comp159969_c1_seq1 844 457 .
Chr1	stalkie_big_nohaplotig	exon	154951751	154951975	99	-	.	Parent=comp159969_c1_seq1.mrna1;Target=comp159969_c1_seq1 456 232 .
Chr1	stalkie_big_nohaplotig	exon	154952043	154952273	99	-	.	Parent=comp159969_c1_seq1.mrna1;Target=comp159969_c1_seq1 231 1 .
Chr1	stalkie_big_nohaplotig	CDS	154945536	154945736	.	-	0	Parent=comp159969_c1_seq1.mrna1
Chr1	gffcl	locus	154950917	154955715	.	+	.	ID=RLOC_00012757;geneIDs=FBgn0033312.3.path1;transcripts=FBgn0033312.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	154950917	154955715	.	+	.	ID=FBgn0033312.3.mrna1;geneID=FBgn0033312.3.path1;Name=FBgn0033312.3;Dir=sensecoverage=100.0;identity=95.7;matches=934;mismatches=39;indels=3;unknowns=0;locus=RLOC_00012757
Chr1	stalkie_big_nohaplotig	exon	154950917	154951015	96	+	.	Parent=FBgn0033312.3.mrna1;Target=FBgn0033312.3 1 99 +
Chr1	stalkie_big_nohaplotig	exon	154951093	154951205	98	+	.	Parent=FBgn0033312.3.mrna1;Target=FBgn0033312.3 100 212 +
Chr1	stalkie_big_nohaplotig	exon	154951266	154951533	99	+	.	Parent=FBgn0033312.3.mrna1;Target=FBgn0033312.3 213 480 +
Chr1	stalkie_big_nohaplotig	exon	154955048	154955495	93	+	.	Parent=FBgn0033312.3.mrna1;Target=FBgn0033312.3 481 928 +
Chr1	stalkie_big_nohaplotig	exon	154955668	154955715	85	+	.	Parent=FBgn0033312.3.mrna1;Target=FBgn0033312.3 1012 1056 +
Chr1	stalkie_big_nohaplotig	CDS	154950917	154951015	.	+	0	Parent=FBgn0033312.3.mrna1;Target=FBgn0033312.3 1 99 +
Chr1	stalkie_big_nohaplotig	CDS	154951093	154951205	.	+	0	Parent=FBgn0033312.3.mrna1;Target=FBgn0033312.3 100 212 +
Chr1	stalkie_big_nohaplotig	CDS	154951266	154951533	.	+	1	Parent=FBgn0033312.3.mrna1;Target=FBgn0033312.3 213 480 +
Chr1	stalkie_big_nohaplotig	CDS	154955048	154955495	.	+	0	Parent=FBgn0033312.3.mrna1;Target=FBgn0033312.3 481 928 +
Chr1	stalkie_big_nohaplotig	CDS	154955668	154955715	.	+	2	Parent=FBgn0033312.3.mrna1;Target=FBgn0033312.3 1012 1056 +
Chr1	gffcl	locus	155044973	155046239	.	-	.	ID=RLOC_00012759;geneIDs=FBgn0033312.3.path2,comp117841_c0_seq1.path1;transcripts=FBgn0033312.3.mrna2,comp117841_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155044973	155046239	.	-	.	ID=FBgn0033312.3.mrna2;geneID=FBgn0033312.3.path2;Name=FBgn0033312.3;Dir=sensecoverage=100.0;identity=94.6;matches=902;mismatches=48;indels=3;unknowns=0;locus=RLOC_00012759
Chr1	stalkie_big_nohaplotig	exon	155044973	155045014	88	-	.	Parent=FBgn0033312.3.mrna2;Target=FBgn0033312.3 1018 1056 +
Chr1	stalkie_big_nohaplotig	exon	155045187	155045885	95	-	.	Parent=FBgn0033312.3.mrna2;Target=FBgn0033312.3 230 928 +
Chr1	stalkie_big_nohaplotig	exon	155045955	155046067	92	-	.	Parent=FBgn0033312.3.mrna2;Target=FBgn0033312.3 100 212 +
Chr1	stalkie_big_nohaplotig	exon	155046141	155046239	94	-	.	Parent=FBgn0033312.3.mrna2;Target=FBgn0033312.3 1 99 +
Chr1	stalkie_big_nohaplotig	CDS	155044973	155045014	.	-	2	Parent=FBgn0033312.3.mrna2;Target=FBgn0033312.3 1018 1056 +
Chr1	stalkie_big_nohaplotig	CDS	155045187	155045880	.	-	0	Parent=FBgn0033312.3.mrna2;Target=FBgn0033312.3 235 928 +
Chr1	stalkie_big_nohaplotig	mRNA	155044984	155045300	.	-	.	ID=comp117841_c0_seq1.mrna1;geneID=comp117841_c0_seq1.path1;Name=comp117841_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=252;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012759
Chr1	stalkie_big_nohaplotig	exon	155044984	155045102	100	-	.	Parent=comp117841_c0_seq1.mrna1;Target=comp117841_c0_seq1 134 252 +
Chr1	stalkie_big_nohaplotig	exon	155045168	155045300	100	-	.	Parent=comp117841_c0_seq1.mrna1;Target=comp117841_c0_seq1 1 133 +
Chr1	stalkie_big_nohaplotig	CDS	155044985	155045102	.	-	1	Parent=comp117841_c0_seq1.mrna1;Target=comp117841_c0_seq1 134 251 +
Chr1	stalkie_big_nohaplotig	CDS	155045168	155045298	.	-	0	Parent=comp117841_c0_seq1.mrna1;Target=comp117841_c0_seq1 3 133 +
Chr1	gffcl	locus	155073496	155077301	.	-	.	ID=RLOC_00012760;geneIDs=FBgn0030810.1.path1;transcripts=FBgn0030810.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155073496	155077301	.	-	.	ID=FBgn0030810.1.mrna1;geneID=FBgn0030810.1.path1;Name=FBgn0030810.1;Dir=sensecoverage=99.3;identity=99.7;matches=2293;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012760
Chr1	stalkie_big_nohaplotig	exon	155073496	155073839	100	-	.	Parent=FBgn0030810.1.mrna1;Target=FBgn0030810.1 1973 2316 +
Chr1	stalkie_big_nohaplotig	exon	155073907	155074067	99	-	.	Parent=FBgn0030810.1.mrna1;Target=FBgn0030810.1 1812 1972 +
Chr1	stalkie_big_nohaplotig	exon	155074169	155074363	98	-	.	Parent=FBgn0030810.1.mrna1;Target=FBgn0030810.1 1617 1811 +
Chr1	stalkie_big_nohaplotig	exon	155074425	155075564	99	-	.	Parent=FBgn0030810.1.mrna1;Target=FBgn0030810.1 477 1616 +
Chr1	stalkie_big_nohaplotig	exon	155076647	155076797	100	-	.	Parent=FBgn0030810.1.mrna1;Target=FBgn0030810.1 326 476 +
Chr1	stalkie_big_nohaplotig	exon	155076993	155077301	99	-	.	Parent=FBgn0030810.1.mrna1;Target=FBgn0030810.1 17 325 +
Chr1	stalkie_big_nohaplotig	CDS	155073496	155073839	.	-	2	Parent=FBgn0030810.1.mrna1;Target=FBgn0030810.1 1973 2316 +
Chr1	stalkie_big_nohaplotig	CDS	155073907	155074067	.	-	1	Parent=FBgn0030810.1.mrna1;Target=FBgn0030810.1 1812 1972 +
Chr1	stalkie_big_nohaplotig	CDS	155074169	155074363	.	-	1	Parent=FBgn0030810.1.mrna1;Target=FBgn0030810.1 1617 1811 +
Chr1	stalkie_big_nohaplotig	CDS	155074425	155075564	.	-	1	Parent=FBgn0030810.1.mrna1;Target=FBgn0030810.1 477 1616 +
Chr1	stalkie_big_nohaplotig	CDS	155076647	155076797	.	-	2	Parent=FBgn0030810.1.mrna1;Target=FBgn0030810.1 326 476 +
Chr1	stalkie_big_nohaplotig	CDS	155076993	155077299	.	-	0	Parent=FBgn0030810.1.mrna1;Target=FBgn0030810.1 19 325 +
Chr1	gffcl	locus	155112247	155113134	.	+	.	ID=RLOC_00012761;geneIDs=FBgn0015024.7.path1;transcripts=FBgn0015024.7.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155112247	155113134	.	+	.	ID=FBgn0015024.7.mrna1;geneID=FBgn0015024.7.path1;Name=FBgn0015024.7;Dir=indeterminatecoverage=100.0;identity=96.4;matches=856;mismatches=32;indels=0;unknowns=0;Target=FBgn0015024.7 888 1 .;locus=RLOC_00012761
Chr1	stalkie_big_nohaplotig	exon	155112247	155113134	96	+	.	Parent=FBgn0015024.7.mrna1
Chr1	stalkie_big_nohaplotig	CDS	155112247	155113134	.	+	0	Parent=FBgn0015024.7.mrna1
Chr1	gffcl	locus	155270330	155270641	.	+	.	ID=RLOC_00012762;geneIDs=comp67760_c0_seq1.path1;transcripts=comp67760_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155270330	155270641	.	+	.	ID=comp67760_c0_seq1.mrna1;geneID=comp67760_c0_seq1.path1;Name=comp67760_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=310;mismatches=2;indels=0;unknowns=0;Target=comp67760_c0_seq1 312 1 .;CDS_Target=comp67760_c0_seq1 255 193 .;locus=RLOC_00012762
Chr1	stalkie_big_nohaplotig	exon	155270330	155270641	99	+	.	Parent=comp67760_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	155270522	155270584	.	+	0	Parent=comp67760_c0_seq1.mrna1
Chr1	gffcl	locus	155271678	155272277	.	-	.	ID=RLOC_00012763;geneIDs=FBgn0052708.1.path1;transcripts=FBgn0052708.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155271678	155272277	.	-	.	ID=FBgn0052708.1.mrna1;geneID=FBgn0052708.1.path1;Name=FBgn0052708.1;Dir=sensecoverage=100.0;identity=100.0;matches=546;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012763
Chr1	stalkie_big_nohaplotig	exon	155271678	155272039	100	-	.	Parent=FBgn0052708.1.mrna1;Target=FBgn0052708.1 185 546 +
Chr1	stalkie_big_nohaplotig	exon	155272094	155272277	100	-	.	Parent=FBgn0052708.1.mrna1;Target=FBgn0052708.1 1 184 +
Chr1	stalkie_big_nohaplotig	CDS	155271678	155272039	.	-	2	Parent=FBgn0052708.1.mrna1;Target=FBgn0052708.1 185 546 +
Chr1	stalkie_big_nohaplotig	CDS	155272094	155272277	.	-	0	Parent=FBgn0052708.1.mrna1;Target=FBgn0052708.1 1 184 +
Chr1	gffcl	locus	155274050	155276259	.	.	.	ID=RLOC_00012764;geneIDs=FBgn0030817.1.path1,comp149912_c0_seq1.path1;transcripts=FBgn0030817.1.mrna1,comp149912_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155274050	155276259	.	-	.	ID=FBgn0030817.1.mrna1;geneID=FBgn0030817.1.path1;Name=FBgn0030817.1;Dir=sensecoverage=100.0;identity=99.8;matches=1341;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012764
Chr1	stalkie_big_nohaplotig	exon	155274050	155274291	100	-	.	Parent=FBgn0030817.1.mrna1;Target=FBgn0030817.1 1103 1344 +
Chr1	stalkie_big_nohaplotig	exon	155274603	155274778	100	-	.	Parent=FBgn0030817.1.mrna1;Target=FBgn0030817.1 927 1102 +
Chr1	stalkie_big_nohaplotig	exon	155275214	155275671	99	-	.	Parent=FBgn0030817.1.mrna1;Target=FBgn0030817.1 469 926 +
Chr1	stalkie_big_nohaplotig	exon	155275730	155276090	100	-	.	Parent=FBgn0030817.1.mrna1;Target=FBgn0030817.1 108 468 +
Chr1	stalkie_big_nohaplotig	exon	155276153	155276259	100	-	.	Parent=FBgn0030817.1.mrna1;Target=FBgn0030817.1 1 107 +
Chr1	stalkie_big_nohaplotig	CDS	155274050	155274291	.	-	2	Parent=FBgn0030817.1.mrna1;Target=FBgn0030817.1 1103 1344 +
Chr1	stalkie_big_nohaplotig	CDS	155274603	155274778	.	-	1	Parent=FBgn0030817.1.mrna1;Target=FBgn0030817.1 927 1102 +
Chr1	stalkie_big_nohaplotig	CDS	155275214	155275671	.	-	0	Parent=FBgn0030817.1.mrna1;Target=FBgn0030817.1 469 926 +
Chr1	stalkie_big_nohaplotig	CDS	155275730	155276090	.	-	1	Parent=FBgn0030817.1.mrna1;Target=FBgn0030817.1 108 468 +
Chr1	stalkie_big_nohaplotig	CDS	155276153	155276259	.	-	0	Parent=FBgn0030817.1.mrna1;Target=FBgn0030817.1 1 107 +
Chr1	stalkie_big_nohaplotig	mRNA	155274755	155275236	.	+	.	ID=comp149912_c0_seq1.mrna1;geneID=comp149912_c0_seq1.path1;Name=comp149912_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.6;matches=458;mismatches=24;indels=2;unknowns=0;Target=comp149912_c0_seq1 484 1 .;CDS_Target=comp149912_c0_seq1 123 31 .;locus=RLOC_00012764
Chr1	stalkie_big_nohaplotig	exon	155274755	155275236	94	+	.	Parent=comp149912_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	155274785	155274876	.	+	0	Parent=comp149912_c0_seq1.mrna1
Chr1	gffcl	locus	155279008	155279914	.	+	.	ID=RLOC_00012765;geneIDs=comp136040_c0_seq1.path1;transcripts=comp136040_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155279008	155279914	.	+	.	ID=comp136040_c0_seq1.mrna1;geneID=comp136040_c0_seq1.path1;Name=comp136040_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.6;matches=868;mismatches=26;indels=14;unknowns=0;Target=comp136040_c0_seq1 895 1 .;CDS_Target=comp136040_c0_seq1 763 647 .;locus=RLOC_00012765
Chr1	stalkie_big_nohaplotig	exon	155279008	155279914	95	+	.	Parent=comp136040_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	155279666	155279782	.	+	0	Parent=comp136040_c0_seq1.mrna1
Chr1	gffcl	locus	155280154	155280976	.	+	.	ID=RLOC_00012766;geneIDs=comp143122_c0_seq1.path1;transcripts=comp143122_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155280154	155280976	.	+	.	ID=comp143122_c0_seq1.mrna1;geneID=comp143122_c0_seq1.path1;Name=comp143122_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.7;matches=768;mismatches=25;indels=1;unknowns=0;locus=RLOC_00012766
Chr1	stalkie_big_nohaplotig	exon	155280154	155280711	96	+	.	Parent=comp143122_c0_seq1.mrna1;Target=comp143122_c0_seq1 558 2 .
Chr1	stalkie_big_nohaplotig	exon	155280741	155280976	98	+	.	Parent=comp143122_c0_seq1.mrna1;Target=comp143122_c0_seq1 796 561 .
Chr1	stalkie_big_nohaplotig	CDS	155280695	155280711	.	+	0	Parent=comp143122_c0_seq1.mrna1;Target=comp143122_c0_seq1 558 542 .
Chr1	stalkie_big_nohaplotig	CDS	155280741	155280760	.	+	1	Parent=comp143122_c0_seq1.mrna1;Target=comp143122_c0_seq1 580 561 .
Chr1	gffcl	locus	155283143	155283717	.	-	.	ID=RLOC_00012767;geneIDs=comp100970_c0_seq1.path1;transcripts=comp100970_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155283143	155283717	.	-	.	ID=comp100970_c0_seq1.mrna1;geneID=comp100970_c0_seq1.path1;Name=comp100970_c0_seq1;Dir=sensecoverage=96.1;identity=98.4;matches=433;mismatches=2;indels=5;unknowns=0;Target=comp100970_c0_seq1 160 219 +;locus=RLOC_00012767
Chr1	stalkie_big_nohaplotig	exon	155283143	155283556	98	-	.	Parent=comp100970_c0_seq1.mrna1;Target=comp100970_c0_seq1 22 440 +
Chr1	stalkie_big_nohaplotig	exon	155283697	155283717	100	-	.	Parent=comp100970_c0_seq1.mrna1;Target=comp100970_c0_seq1 1 21 +
Chr1	stalkie_big_nohaplotig	CDS	155283364	155283423	.	-	0	Parent=comp100970_c0_seq1.mrna1
Chr1	gffcl	locus	155287374	155289011	.	-	.	ID=RLOC_00012768;geneIDs=FBgn0030816.1.path1;transcripts=FBgn0030816.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155287374	155289011	.	-	.	ID=FBgn0030816.1.mrna1;geneID=FBgn0030816.1.path1;Name=FBgn0030816.1;Dir=sensecoverage=93.7;identity=99.4;matches=1339;mismatches=8;indels=0;unknowns=0;locus=RLOC_00012768
Chr1	stalkie_big_nohaplotig	exon	155287374	155287630	98	-	.	Parent=FBgn0030816.1.mrna1;Target=FBgn0030816.1 1181 1437 +
Chr1	stalkie_big_nohaplotig	exon	155287702	155287874	100	-	.	Parent=FBgn0030816.1.mrna1;Target=FBgn0030816.1 1008 1180 +
Chr1	stalkie_big_nohaplotig	exon	155287974	155288425	100	-	.	Parent=FBgn0030816.1.mrna1;Target=FBgn0030816.1 556 1007 +
Chr1	stalkie_big_nohaplotig	exon	155288482	155288842	99	-	.	Parent=FBgn0030816.1.mrna1;Target=FBgn0030816.1 195 555 +
Chr1	stalkie_big_nohaplotig	exon	155288908	155289011	99	-	.	Parent=FBgn0030816.1.mrna1;Target=FBgn0030816.1 91 194 +
Chr1	stalkie_big_nohaplotig	CDS	155287374	155287630	.	-	2	Parent=FBgn0030816.1.mrna1;Target=FBgn0030816.1 1181 1437 +
Chr1	stalkie_big_nohaplotig	CDS	155287702	155287874	.	-	1	Parent=FBgn0030816.1.mrna1;Target=FBgn0030816.1 1008 1180 +
Chr1	stalkie_big_nohaplotig	CDS	155287974	155288425	.	-	0	Parent=FBgn0030816.1.mrna1;Target=FBgn0030816.1 556 1007 +
Chr1	stalkie_big_nohaplotig	CDS	155288482	155288842	.	-	1	Parent=FBgn0030816.1.mrna1;Target=FBgn0030816.1 195 555 +
Chr1	stalkie_big_nohaplotig	CDS	155288908	155289011	.	-	0	Parent=FBgn0030816.1.mrna1;Target=FBgn0030816.1 91 194 +
Chr1	gffcl	locus	155309319	155310256	.	-	.	ID=RLOC_00012769;geneIDs=comp712419_c0_seq1.path1;transcripts=comp712419_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155309319	155310256	.	-	.	ID=comp712419_c0_seq1.mrna1;geneID=comp712419_c0_seq1.path1;Name=comp712419_c0_seq1;Dir=sensecoverage=98.2;identity=90.3;matches=778;mismatches=21;indels=63;unknowns=0;Target=comp712419_c0_seq1 379 444 +;locus=RLOC_00012769
Chr1	stalkie_big_nohaplotig	exon	155309319	155309912	93	-	.	Parent=comp712419_c0_seq1.mrna1;Target=comp712419_c0_seq1 254 832 +
Chr1	stalkie_big_nohaplotig	exon	155309992	155310094	99	-	.	Parent=comp712419_c0_seq1.mrna1;Target=comp712419_c0_seq1 151 253 +
Chr1	stalkie_big_nohaplotig	exon	155310097	155310256	73	-	.	Parent=comp712419_c0_seq1.mrna1;Target=comp712419_c0_seq1 14 135 +
Chr1	stalkie_big_nohaplotig	CDS	155309702	155309787	.	-	0	Parent=comp712419_c0_seq1.mrna1
Chr1	gffcl	locus	155321929	155323800	.	+	.	ID=RLOC_00012771;geneIDs=comp149973_c0_seq1.path1;transcripts=comp149973_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155321929	155323800	.	+	.	ID=comp149973_c0_seq1.mrna1;geneID=comp149973_c0_seq1.path1;Name=comp149973_c0_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=667;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012771
Chr1	stalkie_big_nohaplotig	exon	155321929	155321979	100	+	.	Parent=comp149973_c0_seq1.mrna1;Target=comp149973_c0_seq1 1 51 +
Chr1	stalkie_big_nohaplotig	exon	155322047	155322236	98	+	.	Parent=comp149973_c0_seq1.mrna1;Target=comp149973_c0_seq1 52 241 +
Chr1	stalkie_big_nohaplotig	exon	155323371	155323800	99	+	.	Parent=comp149973_c0_seq1.mrna1;Target=comp149973_c0_seq1 242 671 +
Chr1	stalkie_big_nohaplotig	CDS	155321929	155321979	.	+	0	Parent=comp149973_c0_seq1.mrna1;Target=comp149973_c0_seq1 1 51 +
Chr1	stalkie_big_nohaplotig	CDS	155322047	155322236	.	+	0	Parent=comp149973_c0_seq1.mrna1;Target=comp149973_c0_seq1 52 241 +
Chr1	stalkie_big_nohaplotig	CDS	155323371	155323534	.	+	2	Parent=comp149973_c0_seq1.mrna1;Target=comp149973_c0_seq1 242 405 +
Chr1	gffcl	locus	155324239	155325170	.	-	.	ID=RLOC_00012772;geneIDs=comp135025_c0_seq1.path1;transcripts=comp135025_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155324239	155325170	.	-	.	ID=comp135025_c0_seq1.mrna1;geneID=comp135025_c0_seq1.path1;Name=comp135025_c0_seq1;Dir=indeterminatecoverage=96.9;identity=97.7;matches=911;mismatches=17;indels=4;unknowns=0;Target=comp135025_c0_seq1 928 1 .;CDS_Target=comp135025_c0_seq1 279 1 .;locus=RLOC_00012772
Chr1	stalkie_big_nohaplotig	exon	155324239	155325170	97	-	.	Parent=comp135025_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	155324892	155325170	.	-	0	Parent=comp135025_c0_seq1.mrna1
Chr1	gffcl	locus	155326183	155326502	.	+	.	ID=RLOC_00012773;geneIDs=comp156830_c0_seq1.path1;transcripts=comp156830_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155326183	155326502	.	+	.	ID=comp156830_c0_seq1.mrna1;geneID=comp156830_c0_seq1.path1;Name=comp156830_c0_seq1;Dir=indeterminatecoverage=96.1;identity=74.4;matches=238;mismatches=82;indels=0;unknowns=0;Target=comp156830_c0_seq1 321 2 .;CDS_Target=comp156830_c0_seq1 253 167 .;locus=RLOC_00012773
Chr1	stalkie_big_nohaplotig	exon	155326183	155326502	74	+	.	Parent=comp156830_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	155326348	155326434	.	+	0	Parent=comp156830_c0_seq1.mrna1
Chr1	gffcl	locus	155331715	155332061	.	+	.	ID=RLOC_00012774;geneIDs=comp72105_c0_seq1.path1;transcripts=comp72105_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155331715	155332061	.	+	.	ID=comp72105_c0_seq1.mrna1;geneID=comp72105_c0_seq1.path1;Name=comp72105_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=347;mismatches=0;indels=0;unknowns=0;Target=comp72105_c0_seq1 347 1 .;CDS_Target=comp72105_c0_seq1 314 123 .;locus=RLOC_00012774
Chr1	stalkie_big_nohaplotig	exon	155331715	155332061	100	+	.	Parent=comp72105_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	155331837	155332028	.	+	0	Parent=comp72105_c0_seq1.mrna1
Chr1	gffcl	locus	155333504	155348100	.	-	.	ID=RLOC_00012775;geneIDs=FBgn0030812.1.path1;transcripts=FBgn0030812.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155333504	155348100	.	-	.	ID=FBgn0030812.1.mrna1;geneID=FBgn0030812.1.path1;Name=FBgn0030812.1;Dir=sensecoverage=100.0;identity=100.0;matches=2520;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012775
Chr1	stalkie_big_nohaplotig	exon	155333504	155333579	100	-	.	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 2445 2520 +
Chr1	stalkie_big_nohaplotig	exon	155334086	155334213	100	-	.	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 2317 2444 +
Chr1	stalkie_big_nohaplotig	exon	155334292	155334461	100	-	.	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 2147 2316 +
Chr1	stalkie_big_nohaplotig	exon	155334517	155334899	100	-	.	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 1764 2146 +
Chr1	stalkie_big_nohaplotig	exon	155334972	155335237	100	-	.	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 1498 1763 +
Chr1	stalkie_big_nohaplotig	exon	155335312	155335757	100	-	.	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 1052 1497 +
Chr1	stalkie_big_nohaplotig	exon	155336026	155336121	100	-	.	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 956 1051 +
Chr1	stalkie_big_nohaplotig	exon	155336189	155336274	100	-	.	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 870 955 +
Chr1	stalkie_big_nohaplotig	exon	155336349	155336424	100	-	.	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 794 869 +
Chr1	stalkie_big_nohaplotig	exon	155337449	155337814	100	-	.	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 428 793 +
Chr1	stalkie_big_nohaplotig	exon	155337882	155338167	100	-	.	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 142 427 +
Chr1	stalkie_big_nohaplotig	exon	155343062	155343095	100	-	.	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 108 141 +
Chr1	stalkie_big_nohaplotig	exon	155347994	155348100	100	-	.	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 1 107 +
Chr1	stalkie_big_nohaplotig	CDS	155333504	155333579	.	-	1	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 2445 2520 +
Chr1	stalkie_big_nohaplotig	CDS	155334086	155334213	.	-	0	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 2317 2444 +
Chr1	stalkie_big_nohaplotig	CDS	155334292	155334461	.	-	2	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 2147 2316 +
Chr1	stalkie_big_nohaplotig	CDS	155334517	155334899	.	-	1	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 1764 2146 +
Chr1	stalkie_big_nohaplotig	CDS	155334972	155335237	.	-	0	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 1498 1763 +
Chr1	stalkie_big_nohaplotig	CDS	155335312	155335757	.	-	2	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 1052 1497 +
Chr1	stalkie_big_nohaplotig	CDS	155336026	155336121	.	-	2	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 956 1051 +
Chr1	stalkie_big_nohaplotig	CDS	155336189	155336274	.	-	1	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 870 955 +
Chr1	stalkie_big_nohaplotig	CDS	155336349	155336424	.	-	2	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 794 869 +
Chr1	stalkie_big_nohaplotig	CDS	155337449	155337814	.	-	2	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 428 793 +
Chr1	stalkie_big_nohaplotig	CDS	155337882	155338167	.	-	0	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 142 427 +
Chr1	stalkie_big_nohaplotig	CDS	155343062	155343095	.	-	1	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 108 141 +
Chr1	stalkie_big_nohaplotig	CDS	155347994	155348100	.	-	0	Parent=FBgn0030812.1.mrna1;Target=FBgn0030812.1 1 107 +
Chr1	gffcl	locus	155349642	155351325	.	+	.	ID=RLOC_00012776;geneIDs=comp158061_c0_seq1.path1;transcripts=comp158061_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155349642	155351325	.	+	.	ID=comp158061_c0_seq1.mrna1;geneID=comp158061_c0_seq1.path1;Name=comp158061_c0_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=1149;mismatches=11;indels=0;unknowns=0;locus=RLOC_00012776
Chr1	stalkie_big_nohaplotig	exon	155349642	155349780	97	+	.	Parent=comp158061_c0_seq1.mrna1;Target=comp158061_c0_seq1 1022 1160 -
Chr1	stalkie_big_nohaplotig	exon	155350245	155350369	100	+	.	Parent=comp158061_c0_seq1.mrna1;Target=comp158061_c0_seq1 897 1021 -
Chr1	stalkie_big_nohaplotig	exon	155350430	155351325	99	+	.	Parent=comp158061_c0_seq1.mrna1;Target=comp158061_c0_seq1 1 896 -
Chr1	stalkie_big_nohaplotig	CDS	155349661	155349780	.	+	0	Parent=comp158061_c0_seq1.mrna1;Target=comp158061_c0_seq1 1022 1141 .
Chr1	stalkie_big_nohaplotig	CDS	155350245	155350369	.	+	0	Parent=comp158061_c0_seq1.mrna1;Target=comp158061_c0_seq1 897 1021 .
Chr1	stalkie_big_nohaplotig	CDS	155350430	155350859	.	+	1	Parent=comp158061_c0_seq1.mrna1;Target=comp158061_c0_seq1 467 896 .
Chr1	gffcl	locus	155351670	155352359	.	+	.	ID=RLOC_00012777;geneIDs=FBgn0015024.3.path1;transcripts=FBgn0015024.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155351670	155352359	.	+	.	ID=FBgn0015024.3.mrna1;geneID=FBgn0015024.3.path1;Name=FBgn0015024.3;Dir=indeterminatecoverage=100.0;identity=99.3;matches=685;mismatches=5;indels=0;unknowns=0;Target=FBgn0015024.3 690 1 .;locus=RLOC_00012777
Chr1	stalkie_big_nohaplotig	exon	155351670	155352359	99	+	.	Parent=FBgn0015024.3.mrna1
Chr1	stalkie_big_nohaplotig	CDS	155351670	155352359	.	+	0	Parent=FBgn0015024.3.mrna1
Chr1	gffcl	locus	155413682	155423869	.	+	.	ID=RLOC_00012780;geneIDs=comp105179_c0_seq1.path1;transcripts=comp105179_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155413682	155423869	.	+	.	ID=comp105179_c0_seq1.mrna1;geneID=comp105179_c0_seq1.path1;Name=comp105179_c0_seq1;Dir=indeterminatecoverage=89.4;identity=99.7;matches=1030;mismatches=1;indels=2;unknowns=0;locus=RLOC_00012780
Chr1	stalkie_big_nohaplotig	exon	155413682	155413683	100	+	.	Parent=comp105179_c0_seq1.mrna1;Target=comp105179_c0_seq1 125 124 .
Chr1	stalkie_big_nohaplotig	exon	155413878	155413886	100	+	.	Parent=comp105179_c0_seq1.mrna1;Target=comp105179_c0_seq1 134 126 .
Chr1	stalkie_big_nohaplotig	exon	155418105	155418112	100	+	.	Parent=comp105179_c0_seq1.mrna1;Target=comp105179_c0_seq1 142 135 .
Chr1	stalkie_big_nohaplotig	exon	155422858	155423869	99	+	.	Parent=comp105179_c0_seq1.mrna1;Target=comp105179_c0_seq1 1156 143 .
Chr1	stalkie_big_nohaplotig	CDS	155418111	155418112	.	+	0	Parent=comp105179_c0_seq1.mrna1;Target=comp105179_c0_seq1 142 141 .
Chr1	stalkie_big_nohaplotig	CDS	155422858	155422906	.	+	1	Parent=comp105179_c0_seq1.mrna1;Target=comp105179_c0_seq1 191 143 .
Chr1	gffcl	locus	155414620	155421904	.	+	.	ID=RLOC_00012781;geneIDs=FBgn0014467.1.path1;transcripts=FBgn0014467.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155414620	155421904	.	+	.	ID=FBgn0014467.1.mrna1;geneID=FBgn0014467.1.path1;Name=FBgn0014467.1;Dir=sensecoverage=100.0;identity=99.8;matches=922;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012781
Chr1	stalkie_big_nohaplotig	exon	155414620	155414883	100	+	.	Parent=FBgn0014467.1.mrna1;Target=FBgn0014467.1 1 264 +
Chr1	stalkie_big_nohaplotig	exon	155414975	155415109	100	+	.	Parent=FBgn0014467.1.mrna1;Target=FBgn0014467.1 265 399 +
Chr1	stalkie_big_nohaplotig	exon	155417840	155418011	99	+	.	Parent=FBgn0014467.1.mrna1;Target=FBgn0014467.1 400 571 +
Chr1	stalkie_big_nohaplotig	exon	155421454	155421600	99	+	.	Parent=FBgn0014467.1.mrna1;Target=FBgn0014467.1 572 718 +
Chr1	stalkie_big_nohaplotig	exon	155421699	155421904	100	+	.	Parent=FBgn0014467.1.mrna1;Target=FBgn0014467.1 719 924 +
Chr1	stalkie_big_nohaplotig	CDS	155414620	155414883	.	+	0	Parent=FBgn0014467.1.mrna1;Target=FBgn0014467.1 1 264 +
Chr1	stalkie_big_nohaplotig	CDS	155414975	155415109	.	+	0	Parent=FBgn0014467.1.mrna1;Target=FBgn0014467.1 265 399 +
Chr1	stalkie_big_nohaplotig	CDS	155417840	155418011	.	+	0	Parent=FBgn0014467.1.mrna1;Target=FBgn0014467.1 400 571 +
Chr1	stalkie_big_nohaplotig	CDS	155421454	155421600	.	+	2	Parent=FBgn0014467.1.mrna1;Target=FBgn0014467.1 572 718 +
Chr1	stalkie_big_nohaplotig	CDS	155421699	155421904	.	+	2	Parent=FBgn0014467.1.mrna1;Target=FBgn0014467.1 719 924 +
Chr1	gffcl	locus	155419380	155420464	.	+	.	ID=RLOC_00012782;geneIDs=comp155810_c1_seq1.path1;transcripts=comp155810_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155419380	155420464	.	+	.	ID=comp155810_c1_seq1.mrna1;geneID=comp155810_c1_seq1.path1;Name=comp155810_c1_seq1;Dir=indeterminatecoverage=99.9;identity=96.3;matches=1060;mismatches=23;indels=18;unknowns=0;Target=comp155810_c1_seq1 1099 1 .;CDS_Target=comp155810_c1_seq1 1047 898 .;locus=RLOC_00012782
Chr1	stalkie_big_nohaplotig	exon	155419380	155420464	96	+	.	Parent=comp155810_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	155420263	155420412	.	+	0	Parent=comp155810_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155423887	157361662	.	+	.	ID=comp134970_c0_seq1.mrna1;geneID=comp134970_c0_seq1.path1;Name=comp134970_c0_seq1;Dir=indeterminatecoverage=93.9;identity=95.3;matches=532;mismatches=20;indels=6;unknowns=0;Target=comp134970_c0_seq1 221 63 .;locus=RLOC_00012783
Chr1	stalkie_big_nohaplotig	exon	155423887	155424228	99	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 343 1 .
Chr1	stalkie_big_nohaplotig	exon	157208047	157208048	100	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 345 344 .
Chr1	stalkie_big_nohaplotig	exon	157208200	157208204	100	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 350 346 .
Chr1	stalkie_big_nohaplotig	exon	157215825	157215840	100	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 366 351 .
Chr1	stalkie_big_nohaplotig	exon	157221512	157221516	100	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 371 367 .
Chr1	stalkie_big_nohaplotig	exon	157228805	157228809	100	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 376 372 .
Chr1	stalkie_big_nohaplotig	exon	157243951	157243956	100	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 382 377 .
Chr1	stalkie_big_nohaplotig	exon	157251897	157251903	85	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 389 383 .
Chr1	stalkie_big_nohaplotig	exon	157259480	157259515	60	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 430 390 .
Chr1	stalkie_big_nohaplotig	exon	157261237	157261248	83	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 442 431 .
Chr1	stalkie_big_nohaplotig	exon	157265713	157265720	100	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 450 443 .
Chr1	stalkie_big_nohaplotig	exon	157271788	157271790	100	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 453 451 .
Chr1	stalkie_big_nohaplotig	exon	157279335	157279342	100	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 461 454 .
Chr1	stalkie_big_nohaplotig	exon	157286608	157286615	100	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 469 462 .
Chr1	stalkie_big_nohaplotig	exon	157301255	157301259	100	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 474 470 .
Chr1	stalkie_big_nohaplotig	exon	157301261	157301263	100	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 501 499 .
Chr1	stalkie_big_nohaplotig	exon	157307471	157307476	100	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 507 502 .
Chr1	stalkie_big_nohaplotig	exon	157314101	157314108	100	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 515 508 .
Chr1	stalkie_big_nohaplotig	exon	157319740	157319743	100	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 519 516 .
Chr1	stalkie_big_nohaplotig	exon	157322796	157322800	100	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 524 520 .
Chr1	stalkie_big_nohaplotig	exon	157328341	157328343	100	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 527 525 .
Chr1	stalkie_big_nohaplotig	exon	157348224	157348230	100	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 534 528 .
Chr1	stalkie_big_nohaplotig	exon	157350108	157350117	100	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 544 535 .
Chr1	stalkie_big_nohaplotig	exon	157354712	157354714	100	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 547 545 .
Chr1	stalkie_big_nohaplotig	exon	157359859	157359874	81	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 563 548 .
Chr1	stalkie_big_nohaplotig	exon	157360763	157360772	90	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 573 564 .
Chr1	stalkie_big_nohaplotig	exon	157361654	157361662	100	+	.	Parent=comp134970_c0_seq1.mrna1;Target=comp134970_c0_seq1 582 574 .
Chr1	stalkie_big_nohaplotig	CDS	155423949	155424107	.	+	0	Parent=comp134970_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157279097	157279409	.	-	.	ID=comp118418_c0_seq1.mrna1;geneID=comp118418_c0_seq1.path1;Name=comp118418_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=311;mismatches=2;indels=0;unknowns=0;Target=comp118418_c0_seq1 313 1 .;CDS_Target=comp118418_c0_seq1 177 124 .;locus=RLOC_00012783
Chr1	stalkie_big_nohaplotig	exon	157279097	157279409	99	-	.	Parent=comp118418_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	157279233	157279286	.	-	0	Parent=comp118418_c0_seq1.mrna1
Chr1	gffcl	locus	155427292	155430334	.	+	.	ID=RLOC_00012784;geneIDs=FBgn0030499.1.path1;transcripts=FBgn0030499.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155427292	155430334	.	+	.	ID=FBgn0030499.1.mrna1;geneID=FBgn0030499.1.path1;Name=FBgn0030499.1;Dir=sensecoverage=100.0;identity=99.6;matches=2261;mismatches=9;indels=1;unknowns=0;locus=RLOC_00012784
Chr1	stalkie_big_nohaplotig	exon	155427292	155427398	99	+	.	Parent=FBgn0030499.1.mrna1;Target=FBgn0030499.1 1 108 +
Chr1	stalkie_big_nohaplotig	exon	155427453	155427656	100	+	.	Parent=FBgn0030499.1.mrna1;Target=FBgn0030499.1 109 312 +
Chr1	stalkie_big_nohaplotig	exon	155427712	155428501	99	+	.	Parent=FBgn0030499.1.mrna1;Target=FBgn0030499.1 313 1102 +
Chr1	stalkie_big_nohaplotig	exon	155428566	155428967	99	+	.	Parent=FBgn0030499.1.mrna1;Target=FBgn0030499.1 1103 1504 +
Chr1	stalkie_big_nohaplotig	exon	155429035	155429215	100	+	.	Parent=FBgn0030499.1.mrna1;Target=FBgn0030499.1 1505 1685 +
Chr1	stalkie_big_nohaplotig	exon	155429271	155429338	100	+	.	Parent=FBgn0030499.1.mrna1;Target=FBgn0030499.1 1686 1753 +
Chr1	stalkie_big_nohaplotig	exon	155429817	155430334	99	+	.	Parent=FBgn0030499.1.mrna1;Target=FBgn0030499.1 1754 2271 +
Chr1	stalkie_big_nohaplotig	CDS	155427327	155427398	.	+	0	Parent=FBgn0030499.1.mrna1;Target=FBgn0030499.1 37 108 +
Chr1	stalkie_big_nohaplotig	CDS	155427453	155427656	.	+	0	Parent=FBgn0030499.1.mrna1;Target=FBgn0030499.1 109 312 +
Chr1	stalkie_big_nohaplotig	CDS	155427712	155428501	.	+	0	Parent=FBgn0030499.1.mrna1;Target=FBgn0030499.1 313 1102 +
Chr1	stalkie_big_nohaplotig	CDS	155428566	155428967	.	+	2	Parent=FBgn0030499.1.mrna1;Target=FBgn0030499.1 1103 1504 +
Chr1	stalkie_big_nohaplotig	CDS	155429035	155429215	.	+	2	Parent=FBgn0030499.1.mrna1;Target=FBgn0030499.1 1505 1685 +
Chr1	stalkie_big_nohaplotig	CDS	155429271	155429338	.	+	1	Parent=FBgn0030499.1.mrna1;Target=FBgn0030499.1 1686 1753 +
Chr1	stalkie_big_nohaplotig	CDS	155429817	155430334	.	+	2	Parent=FBgn0030499.1.mrna1;Target=FBgn0030499.1 1754 2271 +
Chr1	gffcl	locus	155435749	155494775	.	-	.	ID=RLOC_00012785;geneIDs=FBgn0053181.1.path1,comp159704_c0_seq1.path1;transcripts=comp159704_c0_seq1.mrna1,FBgn0053181.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155435749	155494775	.	-	.	ID=comp159704_c0_seq1.mrna1;geneID=comp159704_c0_seq1.path1;Name=comp159704_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=3355;mismatches=9;indels=8;unknowns=0;locus=RLOC_00012785
Chr1	stalkie_big_nohaplotig	exon	155435749	155437206	99	-	.	Parent=comp159704_c0_seq1.mrna1;Target=comp159704_c0_seq1 1913 3371 +
Chr1	stalkie_big_nohaplotig	exon	155438499	155438647	97	-	.	Parent=comp159704_c0_seq1.mrna1;Target=comp159704_c0_seq1 1764 1912 +
Chr1	stalkie_big_nohaplotig	exon	155438709	155438914	100	-	.	Parent=comp159704_c0_seq1.mrna1;Target=comp159704_c0_seq1 1558 1763 +
Chr1	stalkie_big_nohaplotig	exon	155439828	155439975	100	-	.	Parent=comp159704_c0_seq1.mrna1;Target=comp159704_c0_seq1 1410 1557 +
Chr1	stalkie_big_nohaplotig	exon	155441191	155441337	98	-	.	Parent=comp159704_c0_seq1.mrna1;Target=comp159704_c0_seq1 1263 1409 +
Chr1	stalkie_big_nohaplotig	exon	155441405	155441729	100	-	.	Parent=comp159704_c0_seq1.mrna1;Target=comp159704_c0_seq1 938 1262 +
Chr1	stalkie_big_nohaplotig	exon	155444605	155444918	100	-	.	Parent=comp159704_c0_seq1.mrna1;Target=comp159704_c0_seq1 624 937 +
Chr1	stalkie_big_nohaplotig	exon	155494157	155494775	99	-	.	Parent=comp159704_c0_seq1.mrna1;Target=comp159704_c0_seq1 2 623 +
Chr1	stalkie_big_nohaplotig	CDS	155437006	155437206	.	-	0	Parent=comp159704_c0_seq1.mrna1;Target=comp159704_c0_seq1 1913 2113 +
Chr1	stalkie_big_nohaplotig	CDS	155438499	155438647	.	-	2	Parent=comp159704_c0_seq1.mrna1;Target=comp159704_c0_seq1 1764 1912 +
Chr1	stalkie_big_nohaplotig	CDS	155438709	155438914	.	-	1	Parent=comp159704_c0_seq1.mrna1;Target=comp159704_c0_seq1 1558 1763 +
Chr1	stalkie_big_nohaplotig	CDS	155439828	155439975	.	-	2	Parent=comp159704_c0_seq1.mrna1;Target=comp159704_c0_seq1 1410 1557 +
Chr1	stalkie_big_nohaplotig	CDS	155441191	155441337	.	-	2	Parent=comp159704_c0_seq1.mrna1;Target=comp159704_c0_seq1 1263 1409 +
Chr1	stalkie_big_nohaplotig	CDS	155441405	155441729	.	-	0	Parent=comp159704_c0_seq1.mrna1;Target=comp159704_c0_seq1 938 1262 +
Chr1	stalkie_big_nohaplotig	CDS	155444605	155444918	.	-	2	Parent=comp159704_c0_seq1.mrna1;Target=comp159704_c0_seq1 624 937 +
Chr1	stalkie_big_nohaplotig	CDS	155494157	155494175	.	-	0	Parent=comp159704_c0_seq1.mrna1;Target=comp159704_c0_seq1 605 623 +
Chr1	stalkie_big_nohaplotig	mRNA	155437009	155447855	.	-	.	ID=FBgn0053181.1.mrna1;geneID=FBgn0053181.1.path1;Name=FBgn0053181.1;Dir=sensecoverage=100.0;identity=99.7;matches=1965;mismatches=6;indels=0;unknowns=0;locus=RLOC_00012785
Chr1	stalkie_big_nohaplotig	exon	155437009	155437206	99	-	.	Parent=FBgn0053181.1.mrna1;Target=FBgn0053181.1 1774 1971 +
Chr1	stalkie_big_nohaplotig	exon	155438499	155438647	97	-	.	Parent=FBgn0053181.1.mrna1;Target=FBgn0053181.1 1625 1773 +
Chr1	stalkie_big_nohaplotig	exon	155438709	155438914	100	-	.	Parent=FBgn0053181.1.mrna1;Target=FBgn0053181.1 1419 1624 +
Chr1	stalkie_big_nohaplotig	exon	155439828	155439975	100	-	.	Parent=FBgn0053181.1.mrna1;Target=FBgn0053181.1 1271 1418 +
Chr1	stalkie_big_nohaplotig	exon	155441191	155441337	98	-	.	Parent=FBgn0053181.1.mrna1;Target=FBgn0053181.1 1124 1270 +
Chr1	stalkie_big_nohaplotig	exon	155441405	155441729	100	-	.	Parent=FBgn0053181.1.mrna1;Target=FBgn0053181.1 799 1123 +
Chr1	stalkie_big_nohaplotig	exon	155444605	155444918	100	-	.	Parent=FBgn0053181.1.mrna1;Target=FBgn0053181.1 485 798 +
Chr1	stalkie_big_nohaplotig	exon	155447372	155447855	100	-	.	Parent=FBgn0053181.1.mrna1;Target=FBgn0053181.1 1 484 +
Chr1	stalkie_big_nohaplotig	CDS	155437009	155437206	.	-	0	Parent=FBgn0053181.1.mrna1;Target=FBgn0053181.1 1774 1971 +
Chr1	stalkie_big_nohaplotig	CDS	155438499	155438647	.	-	2	Parent=FBgn0053181.1.mrna1;Target=FBgn0053181.1 1625 1773 +
Chr1	stalkie_big_nohaplotig	CDS	155438709	155438914	.	-	1	Parent=FBgn0053181.1.mrna1;Target=FBgn0053181.1 1419 1624 +
Chr1	stalkie_big_nohaplotig	CDS	155439828	155439975	.	-	2	Parent=FBgn0053181.1.mrna1;Target=FBgn0053181.1 1271 1418 +
Chr1	stalkie_big_nohaplotig	CDS	155441191	155441337	.	-	2	Parent=FBgn0053181.1.mrna1;Target=FBgn0053181.1 1124 1270 +
Chr1	stalkie_big_nohaplotig	CDS	155441405	155441729	.	-	0	Parent=FBgn0053181.1.mrna1;Target=FBgn0053181.1 799 1123 +
Chr1	stalkie_big_nohaplotig	CDS	155444605	155444918	.	-	2	Parent=FBgn0053181.1.mrna1;Target=FBgn0053181.1 485 798 +
Chr1	stalkie_big_nohaplotig	CDS	155447372	155447855	.	-	0	Parent=FBgn0053181.1.mrna1;Target=FBgn0053181.1 1 484 +
Chr1	gffcl	locus	155518387	155519200	.	-	.	ID=RLOC_00012786;geneIDs=FBgn0000360.1.path1;transcripts=FBgn0000360.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155518387	155519200	.	-	.	ID=FBgn0000360.1.mrna1;geneID=FBgn0000360.1.path1;Name=FBgn0000360.1;Dir=sensecoverage=100.0;identity=99.9;matches=737;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012786
Chr1	stalkie_big_nohaplotig	exon	155518387	155519073	100	-	.	Parent=FBgn0000360.1.mrna1;Target=FBgn0000360.1 52 738 +
Chr1	stalkie_big_nohaplotig	exon	155519150	155519200	98	-	.	Parent=FBgn0000360.1.mrna1;Target=FBgn0000360.1 1 51 +
Chr1	stalkie_big_nohaplotig	CDS	155518387	155519073	.	-	0	Parent=FBgn0000360.1.mrna1;Target=FBgn0000360.1 52 738 +
Chr1	stalkie_big_nohaplotig	CDS	155519150	155519200	.	-	0	Parent=FBgn0000360.1.mrna1;Target=FBgn0000360.1 1 51 +
Chr1	gffcl	locus	155521984	155522915	.	-	.	ID=RLOC_00012787;geneIDs=FBgn0000359.1.path1;transcripts=FBgn0000359.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155521984	155522915	.	-	.	ID=FBgn0000359.1.mrna1;geneID=FBgn0000359.1.path1;Name=FBgn0000359.1;Dir=sensecoverage=100.0;identity=99.9;matches=845;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012787
Chr1	stalkie_big_nohaplotig	exon	155521984	155522739	99	-	.	Parent=FBgn0000359.1.mrna1;Target=FBgn0000359.1 91 846 +
Chr1	stalkie_big_nohaplotig	exon	155522826	155522915	100	-	.	Parent=FBgn0000359.1.mrna1;Target=FBgn0000359.1 1 90 +
Chr1	stalkie_big_nohaplotig	CDS	155521984	155522739	.	-	0	Parent=FBgn0000359.1.mrna1;Target=FBgn0000359.1 91 846 +
Chr1	stalkie_big_nohaplotig	CDS	155522826	155522915	.	-	0	Parent=FBgn0000359.1.mrna1;Target=FBgn0000359.1 1 90 +
Chr1	gffcl	locus	155524423	155525979	.	-	.	ID=RLOC_00012788;geneIDs=FBgn0023506.1.path1;transcripts=FBgn0023506.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155524423	155525979	.	-	.	ID=FBgn0023506.1.mrna1;geneID=FBgn0023506.1.path1;Name=FBgn0023506.1;Dir=sensecoverage=99.8;identity=99.5;matches=1373;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012788
Chr1	stalkie_big_nohaplotig	exon	155524423	155525256	99	-	.	Parent=FBgn0023506.1.mrna1;Target=FBgn0023506.1 550 1383 +
Chr1	stalkie_big_nohaplotig	exon	155525310	155525659	99	-	.	Parent=FBgn0023506.1.mrna1;Target=FBgn0023506.1 200 549 +
Chr1	stalkie_big_nohaplotig	exon	155525728	155525884	98	-	.	Parent=FBgn0023506.1.mrna1;Target=FBgn0023506.1 43 199 +
Chr1	stalkie_big_nohaplotig	exon	155525941	155525979	97	-	.	Parent=FBgn0023506.1.mrna1;Target=FBgn0023506.1 4 42 +
Chr1	stalkie_big_nohaplotig	CDS	155524423	155525256	.	-	0	Parent=FBgn0023506.1.mrna1;Target=FBgn0023506.1 550 1383 +
Chr1	stalkie_big_nohaplotig	CDS	155525310	155525659	.	-	2	Parent=FBgn0023506.1.mrna1;Target=FBgn0023506.1 200 549 +
Chr1	stalkie_big_nohaplotig	CDS	155525728	155525884	.	-	0	Parent=FBgn0023506.1.mrna1;Target=FBgn0023506.1 43 199 +
Chr1	stalkie_big_nohaplotig	CDS	155525941	155525979	.	-	0	Parent=FBgn0023506.1.mrna1;Target=FBgn0023506.1 4 42 +
Chr1	gffcl	locus	155536305	155544273	.	-	.	ID=RLOC_00012789;geneIDs=FBgn0021767.1.path1;transcripts=FBgn0021767.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155536305	155544273	.	-	.	ID=FBgn0021767.1.mrna1;geneID=FBgn0021767.1.path1;Name=FBgn0021767.1;Dir=sensecoverage=100.0;identity=99.9;matches=1567;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012789
Chr1	stalkie_big_nohaplotig	exon	155536305	155536957	99	-	.	Parent=FBgn0021767.1.mrna1;Target=FBgn0021767.1 917 1569 +
Chr1	stalkie_big_nohaplotig	exon	155537027	155537172	100	-	.	Parent=FBgn0021767.1.mrna1;Target=FBgn0021767.1 771 916 +
Chr1	stalkie_big_nohaplotig	exon	155539780	155539847	100	-	.	Parent=FBgn0021767.1.mrna1;Target=FBgn0021767.1 703 770 +
Chr1	stalkie_big_nohaplotig	exon	155540606	155540767	100	-	.	Parent=FBgn0021767.1.mrna1;Target=FBgn0021767.1 541 702 +
Chr1	stalkie_big_nohaplotig	exon	155543456	155543612	100	-	.	Parent=FBgn0021767.1.mrna1;Target=FBgn0021767.1 384 540 +
Chr1	stalkie_big_nohaplotig	exon	155543675	155543904	100	-	.	Parent=FBgn0021767.1.mrna1;Target=FBgn0021767.1 154 383 +
Chr1	stalkie_big_nohaplotig	exon	155544121	155544273	100	-	.	Parent=FBgn0021767.1.mrna1;Target=FBgn0021767.1 1 153 +
Chr1	stalkie_big_nohaplotig	CDS	155536305	155536957	.	-	2	Parent=FBgn0021767.1.mrna1;Target=FBgn0021767.1 917 1569 +
Chr1	stalkie_big_nohaplotig	CDS	155537027	155537172	.	-	1	Parent=FBgn0021767.1.mrna1;Target=FBgn0021767.1 771 916 +
Chr1	stalkie_big_nohaplotig	CDS	155539780	155539847	.	-	0	Parent=FBgn0021767.1.mrna1;Target=FBgn0021767.1 703 770 +
Chr1	stalkie_big_nohaplotig	CDS	155540606	155540767	.	-	0	Parent=FBgn0021767.1.mrna1;Target=FBgn0021767.1 541 702 +
Chr1	stalkie_big_nohaplotig	CDS	155543456	155543612	.	-	1	Parent=FBgn0021767.1.mrna1;Target=FBgn0021767.1 384 540 +
Chr1	stalkie_big_nohaplotig	CDS	155543675	155543904	.	-	0	Parent=FBgn0021767.1.mrna1;Target=FBgn0021767.1 154 383 +
Chr1	stalkie_big_nohaplotig	CDS	155544121	155544273	.	-	0	Parent=FBgn0021767.1.mrna1;Target=FBgn0021767.1 1 153 +
Chr1	gffcl	locus	155557682	155561537	.	-	.	ID=RLOC_00012790;geneIDs=FBgn0030040.1.path1;transcripts=FBgn0030040.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155557682	155561537	.	-	.	ID=FBgn0030040.1.mrna1;geneID=FBgn0030040.1.path1;Name=FBgn0030040.1;Dir=sensecoverage=100.0;identity=99.8;matches=656;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012790
Chr1	stalkie_big_nohaplotig	exon	155557682	155557899	100	-	.	Parent=FBgn0030040.1.mrna1;Target=FBgn0030040.1 440 657 +
Chr1	stalkie_big_nohaplotig	exon	155557963	155558211	99	-	.	Parent=FBgn0030040.1.mrna1;Target=FBgn0030040.1 191 439 +
Chr1	stalkie_big_nohaplotig	exon	155558279	155558392	100	-	.	Parent=FBgn0030040.1.mrna1;Target=FBgn0030040.1 77 190 +
Chr1	stalkie_big_nohaplotig	exon	155561462	155561537	100	-	.	Parent=FBgn0030040.1.mrna1;Target=FBgn0030040.1 1 76 +
Chr1	stalkie_big_nohaplotig	CDS	155557682	155557899	.	-	2	Parent=FBgn0030040.1.mrna1;Target=FBgn0030040.1 440 657 +
Chr1	stalkie_big_nohaplotig	CDS	155557963	155558211	.	-	2	Parent=FBgn0030040.1.mrna1;Target=FBgn0030040.1 191 439 +
Chr1	stalkie_big_nohaplotig	CDS	155558279	155558392	.	-	2	Parent=FBgn0030040.1.mrna1;Target=FBgn0030040.1 77 190 +
Chr1	stalkie_big_nohaplotig	CDS	155561462	155561537	.	-	0	Parent=FBgn0030040.1.mrna1;Target=FBgn0030040.1 1 76 +
Chr1	gffcl	locus	155564558	155565440	.	+	.	ID=RLOC_00012791;geneIDs=FBgn0030039.1.path1;transcripts=FBgn0030039.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155564558	155565440	.	+	.	ID=FBgn0030039.1.mrna1;geneID=FBgn0030039.1.path1;Name=FBgn0030039.1;Dir=sensecoverage=100.0;identity=99.5;matches=758;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012791
Chr1	stalkie_big_nohaplotig	exon	155564558	155564886	100	+	.	Parent=FBgn0030039.1.mrna1;Target=FBgn0030039.1 1 329 +
Chr1	stalkie_big_nohaplotig	exon	155564949	155565063	100	+	.	Parent=FBgn0030039.1.mrna1;Target=FBgn0030039.1 330 444 +
Chr1	stalkie_big_nohaplotig	exon	155565123	155565440	98	+	.	Parent=FBgn0030039.1.mrna1;Target=FBgn0030039.1 445 762 +
Chr1	stalkie_big_nohaplotig	CDS	155564558	155564886	.	+	0	Parent=FBgn0030039.1.mrna1;Target=FBgn0030039.1 1 329 +
Chr1	stalkie_big_nohaplotig	CDS	155564949	155565063	.	+	1	Parent=FBgn0030039.1.mrna1;Target=FBgn0030039.1 330 444 +
Chr1	stalkie_big_nohaplotig	CDS	155565123	155565440	.	+	0	Parent=FBgn0030039.1.mrna1;Target=FBgn0030039.1 445 762 +
Chr1	gffcl	locus	155566708	155578256	.	-	.	ID=RLOC_00012792;geneIDs=FBgn0030038.1.path1;transcripts=FBgn0030038.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155566708	155578256	.	-	.	ID=FBgn0030038.1.mrna1;geneID=FBgn0030038.1.path1;Name=FBgn0030038.1;Dir=sensecoverage=100.0;identity=99.7;matches=1531;mismatches=5;indels=0;unknowns=0;locus=RLOC_00012792
Chr1	stalkie_big_nohaplotig	exon	155566708	155566917	100	-	.	Parent=FBgn0030038.1.mrna1;Target=FBgn0030038.1 1327 1536 +
Chr1	stalkie_big_nohaplotig	exon	155567196	155567316	99	-	.	Parent=FBgn0030038.1.mrna1;Target=FBgn0030038.1 1206 1326 +
Chr1	stalkie_big_nohaplotig	exon	155567384	155567610	100	-	.	Parent=FBgn0030038.1.mrna1;Target=FBgn0030038.1 979 1205 +
Chr1	stalkie_big_nohaplotig	exon	155567674	155567922	99	-	.	Parent=FBgn0030038.1.mrna1;Target=FBgn0030038.1 730 978 +
Chr1	stalkie_big_nohaplotig	exon	155568214	155568351	100	-	.	Parent=FBgn0030038.1.mrna1;Target=FBgn0030038.1 592 729 +
Chr1	stalkie_big_nohaplotig	exon	155569570	155569815	100	-	.	Parent=FBgn0030038.1.mrna1;Target=FBgn0030038.1 346 591 +
Chr1	stalkie_big_nohaplotig	exon	155569886	155570052	98	-	.	Parent=FBgn0030038.1.mrna1;Target=FBgn0030038.1 179 345 +
Chr1	stalkie_big_nohaplotig	exon	155578079	155578256	99	-	.	Parent=FBgn0030038.1.mrna1;Target=FBgn0030038.1 1 178 +
Chr1	stalkie_big_nohaplotig	CDS	155566708	155566917	.	-	0	Parent=FBgn0030038.1.mrna1;Target=FBgn0030038.1 1327 1536 +
Chr1	stalkie_big_nohaplotig	CDS	155567196	155567316	.	-	1	Parent=FBgn0030038.1.mrna1;Target=FBgn0030038.1 1206 1326 +
Chr1	stalkie_big_nohaplotig	CDS	155567384	155567610	.	-	0	Parent=FBgn0030038.1.mrna1;Target=FBgn0030038.1 979 1205 +
Chr1	stalkie_big_nohaplotig	CDS	155567674	155567922	.	-	0	Parent=FBgn0030038.1.mrna1;Target=FBgn0030038.1 730 978 +
Chr1	stalkie_big_nohaplotig	CDS	155568214	155568351	.	-	0	Parent=FBgn0030038.1.mrna1;Target=FBgn0030038.1 592 729 +
Chr1	stalkie_big_nohaplotig	CDS	155569570	155569815	.	-	0	Parent=FBgn0030038.1.mrna1;Target=FBgn0030038.1 346 591 +
Chr1	stalkie_big_nohaplotig	CDS	155569886	155570052	.	-	2	Parent=FBgn0030038.1.mrna1;Target=FBgn0030038.1 179 345 +
Chr1	stalkie_big_nohaplotig	CDS	155578079	155578256	.	-	0	Parent=FBgn0030038.1.mrna1;Target=FBgn0030038.1 1 178 +
Chr1	gffcl	locus	155568469	155569422	.	+	.	ID=RLOC_00012793;geneIDs=comp161022_c0_seq1.path1;transcripts=comp161022_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155568469	155569422	.	+	.	ID=comp161022_c0_seq1.mrna1;geneID=comp161022_c0_seq1.path1;Name=comp161022_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.1;matches=920;mismatches=34;indels=13;unknowns=0;Target=comp161022_c0_seq1 967 1 .;CDS_Target=comp161022_c0_seq1 892 698 .;locus=RLOC_00012793
Chr1	stalkie_big_nohaplotig	exon	155568469	155569422	95	+	.	Parent=comp161022_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	155569153	155569347	.	+	0	Parent=comp161022_c0_seq1.mrna1
Chr1	gffcl	locus	155579242	155579921	.	-	.	ID=RLOC_00012794;geneIDs=FBgn0052544.1.path1;transcripts=FBgn0052544.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155579242	155579921	.	-	.	ID=FBgn0052544.1.mrna1;geneID=FBgn0052544.1.path1;Name=FBgn0052544.1;Dir=sensecoverage=100.0;identity=100.0;matches=618;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012794
Chr1	stalkie_big_nohaplotig	exon	155579242	155579706	100	-	.	Parent=FBgn0052544.1.mrna1;Target=FBgn0052544.1 154 618 +
Chr1	stalkie_big_nohaplotig	exon	155579769	155579921	100	-	.	Parent=FBgn0052544.1.mrna1;Target=FBgn0052544.1 1 153 +
Chr1	stalkie_big_nohaplotig	CDS	155579242	155579706	.	-	0	Parent=FBgn0052544.1.mrna1;Target=FBgn0052544.1 154 618 +
Chr1	stalkie_big_nohaplotig	CDS	155579769	155579921	.	-	0	Parent=FBgn0052544.1.mrna1;Target=FBgn0052544.1 1 153 +
Chr1	gffcl	locus	155580298	155582052	.	-	.	ID=RLOC_00012795;geneIDs=FBgn0030969.1.path1;transcripts=FBgn0030969.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155580298	155582052	.	-	.	ID=FBgn0030969.1.mrna1;geneID=FBgn0030969.1.path1;Name=FBgn0030969.1;Dir=sensecoverage=100.0;identity=99.8;matches=1563;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012795
Chr1	stalkie_big_nohaplotig	exon	155580298	155580544	100	-	.	Parent=FBgn0030969.1.mrna1;Target=FBgn0030969.1 1320 1566 +
Chr1	stalkie_big_nohaplotig	exon	155580605	155581763	99	-	.	Parent=FBgn0030969.1.mrna1;Target=FBgn0030969.1 161 1319 +
Chr1	stalkie_big_nohaplotig	exon	155581829	155581894	100	-	.	Parent=FBgn0030969.1.mrna1;Target=FBgn0030969.1 95 160 +
Chr1	stalkie_big_nohaplotig	exon	155581959	155582052	100	-	.	Parent=FBgn0030969.1.mrna1;Target=FBgn0030969.1 1 94 +
Chr1	stalkie_big_nohaplotig	CDS	155580298	155580544	.	-	1	Parent=FBgn0030969.1.mrna1;Target=FBgn0030969.1 1320 1566 +
Chr1	stalkie_big_nohaplotig	CDS	155580605	155581763	.	-	2	Parent=FBgn0030969.1.mrna1;Target=FBgn0030969.1 161 1319 +
Chr1	stalkie_big_nohaplotig	CDS	155581829	155581894	.	-	2	Parent=FBgn0030969.1.mrna1;Target=FBgn0030969.1 95 160 +
Chr1	stalkie_big_nohaplotig	CDS	155581959	155582052	.	-	0	Parent=FBgn0030969.1.mrna1;Target=FBgn0030969.1 1 94 +
Chr1	gffcl	locus	155724255	155724919	.	-	.	ID=RLOC_00012797;geneIDs=comp134145_c1_seq1.path1;transcripts=comp134145_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155724255	155724919	.	-	.	ID=comp134145_c1_seq1.mrna1;geneID=comp134145_c1_seq1.path1;Name=comp134145_c1_seq1;Dir=indeterminatecoverage=99.8;identity=99.0;matches=660;mismatches=1;indels=6;unknowns=0;Target=comp134145_c1_seq1 664 2 .;CDS_Target=comp134145_c1_seq1 100 2 .;locus=RLOC_00012797
Chr1	stalkie_big_nohaplotig	exon	155724255	155724919	98	-	.	Parent=comp134145_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	155724822	155724919	.	-	0	Parent=comp134145_c1_seq1.mrna1
Chr1	gffcl	locus	155732810	155733071	.	-	.	ID=RLOC_00012798;geneIDs=FBgn0026411.1.path1;transcripts=FBgn0026411.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155732810	155733071	.	-	.	ID=FBgn0026411.1.mrna1;geneID=FBgn0026411.1.path1;Name=FBgn0026411.1;Dir=indeterminatecoverage=16.1;identity=100.0;matches=262;mismatches=0;indels=0;unknowns=0;Target=FBgn0026411.1 262 1 .;locus=RLOC_00012798
Chr1	stalkie_big_nohaplotig	exon	155732810	155733071	100	-	.	Parent=FBgn0026411.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	155732810	155733071	.	-	0	Parent=FBgn0026411.1.mrna1
Chr1	gffcl	locus	155741533	155742203	.	+	.	ID=RLOC_00012799;geneIDs=comp134145_c1_seq1.path2;transcripts=comp134145_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	155741533	155742203	.	+	.	ID=comp134145_c1_seq1.mrna2;geneID=comp134145_c1_seq1.path2;Name=comp134145_c1_seq1;Dir=indeterminatecoverage=99.8;identity=98.1;matches=659;mismatches=3;indels=10;unknowns=0;Target=comp134145_c1_seq1 664 2 .;CDS_Target=comp134145_c1_seq1 100 2 .;locus=RLOC_00012799
Chr1	stalkie_big_nohaplotig	exon	155741533	155742203	98	+	.	Parent=comp134145_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	155741533	155741630	.	+	0	Parent=comp134145_c1_seq1.mrna2
Chr1	gffcl	locus	155779115	155858156	.	+	.	ID=RLOC_00012800;geneIDs=FBgn0026411.1.path2;transcripts=FBgn0026411.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	155779115	155858156	.	+	.	ID=FBgn0026411.1.mrna2;geneID=FBgn0026411.1.path2;Name=FBgn0026411.1;Dir=sensecoverage=83.9;identity=99.9;matches=1360;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012800
Chr1	stalkie_big_nohaplotig	exon	155779115	155779310	100	+	.	Parent=FBgn0026411.1.mrna2;Target=FBgn0026411.1 263 458 +
Chr1	stalkie_big_nohaplotig	exon	155783223	155783449	100	+	.	Parent=FBgn0026411.1.mrna2;Target=FBgn0026411.1 459 685 +
Chr1	stalkie_big_nohaplotig	exon	155829374	155829564	100	+	.	Parent=FBgn0026411.1.mrna2;Target=FBgn0026411.1 686 876 +
Chr1	stalkie_big_nohaplotig	exon	155829912	155830130	100	+	.	Parent=FBgn0026411.1.mrna2;Target=FBgn0026411.1 877 1095 +
Chr1	stalkie_big_nohaplotig	exon	155855227	155855488	99	+	.	Parent=FBgn0026411.1.mrna2;Target=FBgn0026411.1 1096 1357 +
Chr1	stalkie_big_nohaplotig	exon	155857891	155858156	100	+	.	Parent=FBgn0026411.1.mrna2;Target=FBgn0026411.1 1358 1623 +
Chr1	stalkie_big_nohaplotig	CDS	155779115	155779310	.	+	1	Parent=FBgn0026411.1.mrna2;Target=FBgn0026411.1 263 458 +
Chr1	stalkie_big_nohaplotig	CDS	155783223	155783449	.	+	0	Parent=FBgn0026411.1.mrna2;Target=FBgn0026411.1 459 685 +
Chr1	stalkie_big_nohaplotig	CDS	155829374	155829564	.	+	1	Parent=FBgn0026411.1.mrna2;Target=FBgn0026411.1 686 876 +
Chr1	stalkie_big_nohaplotig	CDS	155829912	155830130	.	+	2	Parent=FBgn0026411.1.mrna2;Target=FBgn0026411.1 877 1095 +
Chr1	stalkie_big_nohaplotig	CDS	155855227	155855488	.	+	2	Parent=FBgn0026411.1.mrna2;Target=FBgn0026411.1 1096 1357 +
Chr1	stalkie_big_nohaplotig	CDS	155857891	155858156	.	+	1	Parent=FBgn0026411.1.mrna2;Target=FBgn0026411.1 1358 1623 +
Chr1	gffcl	locus	155887651	155890039	.	-	.	ID=RLOC_00012801;geneIDs=ORF820.path1;transcripts=ORF820.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155887651	155890039	.	-	.	ID=ORF820.mrna1;geneID=ORF820.path1;Name=ORF820;Dir=sensecoverage=100.0;identity=99.2;matches=1399;mismatches=8;indels=3;unknowns=0;locus=RLOC_00012801
Chr1	stalkie_big_nohaplotig	exon	155887651	155888174	99	-	.	Parent=ORF820.mrna1;Target=ORF820 887 1410 +
Chr1	stalkie_big_nohaplotig	exon	155889033	155889279	99	-	.	Parent=ORF820.mrna1;Target=ORF820 640 886 +
Chr1	stalkie_big_nohaplotig	exon	155889342	155889840	98	-	.	Parent=ORF820.mrna1;Target=ORF820 138 639 +
Chr1	stalkie_big_nohaplotig	exon	155889903	155890039	100	-	.	Parent=ORF820.mrna1;Target=ORF820 1 137 +
Chr1	stalkie_big_nohaplotig	CDS	155887651	155888174	.	-	2	Parent=ORF820.mrna1;Target=ORF820 887 1410 +
Chr1	stalkie_big_nohaplotig	CDS	155889033	155889279	.	-	0	Parent=ORF820.mrna1;Target=ORF820 640 886 +
Chr1	stalkie_big_nohaplotig	CDS	155889342	155889840	.	-	1	Parent=ORF820.mrna1;Target=ORF820 138 639 +
Chr1	stalkie_big_nohaplotig	CDS	155889903	155890039	.	-	0	Parent=ORF820.mrna1;Target=ORF820 1 137 +
Chr1	gffcl	locus	155915870	155916751	.	+	.	ID=RLOC_00012802;geneIDs=FBgn0030063.1.path1;transcripts=FBgn0030063.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155915870	155916751	.	+	.	ID=FBgn0030063.1.mrna1;geneID=FBgn0030063.1.path1;Name=FBgn0030063.1;Dir=sensecoverage=100.0;identity=98.5;matches=810;mismatches=12;indels=0;unknowns=0;locus=RLOC_00012802
Chr1	stalkie_big_nohaplotig	exon	155915870	155916484	98	+	.	Parent=FBgn0030063.1.mrna1;Target=FBgn0030063.1 1 615 +
Chr1	stalkie_big_nohaplotig	exon	155916545	155916751	98	+	.	Parent=FBgn0030063.1.mrna1;Target=FBgn0030063.1 616 822 +
Chr1	stalkie_big_nohaplotig	CDS	155915870	155916484	.	+	0	Parent=FBgn0030063.1.mrna1;Target=FBgn0030063.1 1 615 +
Chr1	stalkie_big_nohaplotig	CDS	155916545	155916751	.	+	0	Parent=FBgn0030063.1.mrna1;Target=FBgn0030063.1 616 822 +
Chr1	gffcl	locus	155918097	155922191	.	+	.	ID=RLOC_00012803;geneIDs=FBgn0027330.1.path1;transcripts=FBgn0027330.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155918097	155922191	.	+	.	ID=FBgn0027330.1.mrna1;geneID=FBgn0027330.1.path1;Name=FBgn0027330.1;Dir=sensecoverage=99.9;identity=99.8;matches=3070;mismatches=6;indels=0;unknowns=0;locus=RLOC_00012803
Chr1	stalkie_big_nohaplotig	exon	155918097	155918265	100	+	.	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 3 171 +
Chr1	stalkie_big_nohaplotig	exon	155918357	155918451	100	+	.	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 172 266 +
Chr1	stalkie_big_nohaplotig	exon	155918527	155918686	99	+	.	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 267 426 +
Chr1	stalkie_big_nohaplotig	exon	155918751	155919038	99	+	.	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 427 714 +
Chr1	stalkie_big_nohaplotig	exon	155919095	155919258	100	+	.	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 715 878 +
Chr1	stalkie_big_nohaplotig	exon	155919316	155919805	99	+	.	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 879 1368 +
Chr1	stalkie_big_nohaplotig	exon	155919866	155920387	100	+	.	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 1369 1890 +
Chr1	stalkie_big_nohaplotig	exon	155920677	155920770	100	+	.	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 1891 1984 +
Chr1	stalkie_big_nohaplotig	exon	155920825	155921020	100	+	.	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 1985 2180 +
Chr1	stalkie_big_nohaplotig	exon	155921083	155921303	100	+	.	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 2181 2401 +
Chr1	stalkie_big_nohaplotig	exon	155921362	155921534	100	+	.	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 2402 2574 +
Chr1	stalkie_big_nohaplotig	exon	155921630	155922018	100	+	.	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 2575 2963 +
Chr1	stalkie_big_nohaplotig	exon	155922077	155922191	98	+	.	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 2964 3078 +
Chr1	stalkie_big_nohaplotig	CDS	155918098	155918265	.	+	0	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 4 171 +
Chr1	stalkie_big_nohaplotig	CDS	155918357	155918451	.	+	0	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 172 266 +
Chr1	stalkie_big_nohaplotig	CDS	155918527	155918686	.	+	1	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 267 426 +
Chr1	stalkie_big_nohaplotig	CDS	155918751	155919038	.	+	0	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 427 714 +
Chr1	stalkie_big_nohaplotig	CDS	155919095	155919258	.	+	0	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 715 878 +
Chr1	stalkie_big_nohaplotig	CDS	155919316	155919805	.	+	1	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 879 1368 +
Chr1	stalkie_big_nohaplotig	CDS	155919866	155920387	.	+	0	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 1369 1890 +
Chr1	stalkie_big_nohaplotig	CDS	155920677	155920770	.	+	0	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 1891 1984 +
Chr1	stalkie_big_nohaplotig	CDS	155920825	155921020	.	+	2	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 1985 2180 +
Chr1	stalkie_big_nohaplotig	CDS	155921083	155921303	.	+	1	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 2181 2401 +
Chr1	stalkie_big_nohaplotig	CDS	155921362	155921534	.	+	2	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 2402 2574 +
Chr1	stalkie_big_nohaplotig	CDS	155921630	155922018	.	+	0	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 2575 2963 +
Chr1	stalkie_big_nohaplotig	CDS	155922077	155922191	.	+	1	Parent=FBgn0027330.1.mrna1;Target=FBgn0027330.1 2964 3078 +
Chr1	gffcl	locus	155922478	155922837	.	-	.	ID=RLOC_00012804;geneIDs=FBgn0030605.1.path1;transcripts=FBgn0030605.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155922478	155922837	.	-	.	ID=FBgn0030605.1.mrna1;geneID=FBgn0030605.1.path1;Name=FBgn0030605.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=359;mismatches=1;indels=0;unknowns=0;Target=FBgn0030605.1 360 1 .;locus=RLOC_00012804
Chr1	stalkie_big_nohaplotig	exon	155922478	155922837	99	-	.	Parent=FBgn0030605.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	155922478	155922837	.	-	0	Parent=FBgn0030605.1.mrna1
Chr1	gffcl	locus	155924217	155925390	.	+	.	ID=RLOC_00012805;geneIDs=FBgn0030864.1.path1;transcripts=FBgn0030864.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155924217	155925390	.	+	.	ID=FBgn0030864.1.mrna1;geneID=FBgn0030864.1.path1;Name=FBgn0030864.1;Dir=sensecoverage=100.0;identity=99.7;matches=1056;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012805
Chr1	stalkie_big_nohaplotig	exon	155924217	155924530	100	+	.	Parent=FBgn0030864.1.mrna1;Target=FBgn0030864.1 1 314 +
Chr1	stalkie_big_nohaplotig	exon	155924592	155924950	99	+	.	Parent=FBgn0030864.1.mrna1;Target=FBgn0030864.1 315 673 +
Chr1	stalkie_big_nohaplotig	exon	155925005	155925390	99	+	.	Parent=FBgn0030864.1.mrna1;Target=FBgn0030864.1 674 1059 +
Chr1	stalkie_big_nohaplotig	CDS	155924217	155924530	.	+	0	Parent=FBgn0030864.1.mrna1;Target=FBgn0030864.1 1 314 +
Chr1	stalkie_big_nohaplotig	CDS	155924592	155924950	.	+	1	Parent=FBgn0030864.1.mrna1;Target=FBgn0030864.1 315 673 +
Chr1	stalkie_big_nohaplotig	CDS	155925005	155925390	.	+	2	Parent=FBgn0030864.1.mrna1;Target=FBgn0030864.1 674 1059 +
Chr1	gffcl	locus	155930893	155933423	.	-	.	ID=RLOC_00012806;geneIDs=FBgn0026192.1.path1;transcripts=FBgn0026192.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155930893	155933423	.	-	.	ID=FBgn0026192.1.mrna1;geneID=FBgn0026192.1.path1;Name=FBgn0026192.1;Dir=sensecoverage=100.0;identity=99.6;matches=992;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012806
Chr1	stalkie_big_nohaplotig	exon	155930893	155931195	100	-	.	Parent=FBgn0026192.1.mrna1;Target=FBgn0026192.1 694 996 +
Chr1	stalkie_big_nohaplotig	exon	155931334	155931502	98	-	.	Parent=FBgn0026192.1.mrna1;Target=FBgn0026192.1 525 693 +
Chr1	stalkie_big_nohaplotig	exon	155931620	155931845	99	-	.	Parent=FBgn0026192.1.mrna1;Target=FBgn0026192.1 299 524 +
Chr1	stalkie_big_nohaplotig	exon	155932070	155932298	100	-	.	Parent=FBgn0026192.1.mrna1;Target=FBgn0026192.1 70 298 +
Chr1	stalkie_big_nohaplotig	exon	155933355	155933423	100	-	.	Parent=FBgn0026192.1.mrna1;Target=FBgn0026192.1 1 69 +
Chr1	stalkie_big_nohaplotig	CDS	155930893	155931195	.	-	0	Parent=FBgn0026192.1.mrna1;Target=FBgn0026192.1 694 996 +
Chr1	stalkie_big_nohaplotig	CDS	155931334	155931502	.	-	1	Parent=FBgn0026192.1.mrna1;Target=FBgn0026192.1 525 693 +
Chr1	stalkie_big_nohaplotig	CDS	155931620	155931845	.	-	2	Parent=FBgn0026192.1.mrna1;Target=FBgn0026192.1 299 524 +
Chr1	stalkie_big_nohaplotig	CDS	155932070	155932298	.	-	0	Parent=FBgn0026192.1.mrna1;Target=FBgn0026192.1 70 298 +
Chr1	stalkie_big_nohaplotig	CDS	155933355	155933423	.	-	0	Parent=FBgn0026192.1.mrna1;Target=FBgn0026192.1 1 69 +
Chr1	gffcl	locus	155934866	155935615	.	+	.	ID=RLOC_00012807;geneIDs=FBgn0003449.1.path1;transcripts=FBgn0003449.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155934866	155935615	.	+	.	ID=FBgn0003449.1.mrna1;geneID=FBgn0003449.1.path1;Name=FBgn0003449.1;Dir=sensecoverage=100.0;identity=99.6;matches=691;mismatches=1;indels=2;unknowns=0;locus=RLOC_00012807
Chr1	stalkie_big_nohaplotig	exon	155934866	155935263	99	+	.	Parent=FBgn0003449.1.mrna1;Target=FBgn0003449.1 1 397 +
Chr1	stalkie_big_nohaplotig	exon	155935321	155935615	99	+	.	Parent=FBgn0003449.1.mrna1;Target=FBgn0003449.1 398 693 +
Chr1	stalkie_big_nohaplotig	CDS	155934866	155935263	.	+	0	Parent=FBgn0003449.1.mrna1;Target=FBgn0003449.1 1 397 +
Chr1	stalkie_big_nohaplotig	CDS	155935321	155935615	.	+	1	Parent=FBgn0003449.1.mrna1;Target=FBgn0003449.1 398 693 +
Chr1	gffcl	locus	155936601	155936951	.	-	.	ID=RLOC_00012808;geneIDs=FBgn0029752.2.path1;transcripts=FBgn0029752.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155936601	155936951	.	-	.	ID=FBgn0029752.2.mrna1;geneID=FBgn0029752.2.path1;Name=FBgn0029752.2;Dir=indeterminatecoverage=100.0;identity=99.7;matches=350;mismatches=1;indels=0;unknowns=0;Target=FBgn0029752.2 351 1 .;locus=RLOC_00012808
Chr1	stalkie_big_nohaplotig	exon	155936601	155936951	99	-	.	Parent=FBgn0029752.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	155936601	155936951	.	-	0	Parent=FBgn0029752.2.mrna1
Chr1	gffcl	locus	155937087	155937808	.	-	.	ID=RLOC_00012809;geneIDs=FBgn0040070.2.path1;transcripts=FBgn0040070.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155937087	155937808	.	-	.	ID=FBgn0040070.2.mrna1;geneID=FBgn0040070.2.path1;Name=FBgn0040070.2;Dir=sensecoverage=100.0;identity=99.7;matches=625;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012809
Chr1	stalkie_big_nohaplotig	exon	155937087	155937644	99	-	.	Parent=FBgn0040070.2.mrna1;Target=FBgn0040070.2 70 627 +
Chr1	stalkie_big_nohaplotig	exon	155937740	155937808	100	-	.	Parent=FBgn0040070.2.mrna1;Target=FBgn0040070.2 1 69 +
Chr1	stalkie_big_nohaplotig	CDS	155937087	155937644	.	-	0	Parent=FBgn0040070.2.mrna1;Target=FBgn0040070.2 70 627 +
Chr1	stalkie_big_nohaplotig	CDS	155937740	155937808	.	-	0	Parent=FBgn0040070.2.mrna1;Target=FBgn0040070.2 1 69 +
Chr1	gffcl	locus	155939068	155939867	.	+	.	ID=RLOC_00012810;geneIDs=comp135201_c0_seq1.path1;transcripts=comp135201_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155939068	155939867	.	+	.	ID=comp135201_c0_seq1.mrna1;geneID=comp135201_c0_seq1.path1;Name=comp135201_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.1;matches=793;mismatches=6;indels=1;unknowns=0;Target=comp135201_c0_seq1 799 1 .;CDS_Target=comp135201_c0_seq1 623 279 .;locus=RLOC_00012810
Chr1	stalkie_big_nohaplotig	exon	155939068	155939867	99	+	.	Parent=comp135201_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	155939347	155939691	.	+	0	Parent=comp135201_c0_seq1.mrna1
Chr1	gffcl	locus	155940010	155940857	.	-	.	ID=RLOC_00012811;geneIDs=comp151557_c0_seq1.path1;transcripts=comp151557_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155940010	155940857	.	-	.	ID=comp151557_c0_seq1.mrna1;geneID=comp151557_c0_seq1.path1;Name=comp151557_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=839;mismatches=9;indels=0;unknowns=0;Target=comp151557_c0_seq1 848 1 .;CDS_Target=comp151557_c0_seq1 185 3 .;locus=RLOC_00012811
Chr1	stalkie_big_nohaplotig	exon	155940010	155940857	98	-	.	Parent=comp151557_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	155940673	155940855	.	-	0	Parent=comp151557_c0_seq1.mrna1
Chr1	gffcl	locus	155941193	155941868	.	-	.	ID=RLOC_00012812;geneIDs=comp146431_c0_seq1.path1;transcripts=comp146431_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155941193	155941868	.	-	.	ID=comp146431_c0_seq1.mrna1;geneID=comp146431_c0_seq1.path1;Name=comp146431_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=675;mismatches=1;indels=1;unknowns=0;Target=comp146431_c0_seq1 679 3 .;CDS_Target=comp146431_c0_seq1 101 3 .;locus=RLOC_00012812
Chr1	stalkie_big_nohaplotig	exon	155941193	155941868	99	-	.	Parent=comp146431_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	155941770	155941868	.	-	0	Parent=comp146431_c0_seq1.mrna1
Chr1	gffcl	locus	155942345	155943190	.	-	.	ID=RLOC_00012813;geneIDs=comp143117_c0_seq1.path1;transcripts=comp143117_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155942345	155943190	.	-	.	ID=comp143117_c0_seq1.mrna1;geneID=comp143117_c0_seq1.path1;Name=comp143117_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=789;mismatches=3;indels=0;unknowns=0;Target=comp143117_c0_seq1 289 675 .;locus=RLOC_00012813
Chr1	stalkie_big_nohaplotig	exon	155942345	155942563	100	-	.	Parent=comp143117_c0_seq1.mrna1;Target=comp143117_c0_seq1 1 219 -
Chr1	stalkie_big_nohaplotig	exon	155942618	155943190	99	-	.	Parent=comp143117_c0_seq1.mrna1;Target=comp143117_c0_seq1 220 792 -
Chr1	stalkie_big_nohaplotig	CDS	155942687	155943073	.	-	0	Parent=comp143117_c0_seq1.mrna1
Chr1	gffcl	locus	155943806	155946216	.	+	.	ID=RLOC_00012814;geneIDs=FBgn0014024.1.path1;transcripts=FBgn0014024.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155943806	155946216	.	+	.	ID=FBgn0014024.1.mrna1;geneID=FBgn0014024.1.path1;Name=FBgn0014024.1;Dir=sensecoverage=100.0;identity=99.7;matches=1930;mismatches=4;indels=1;unknowns=0;locus=RLOC_00012814
Chr1	stalkie_big_nohaplotig	exon	155943806	155943886	100	+	.	Parent=FBgn0014024.1.mrna1;Target=FBgn0014024.1 1 81 +
Chr1	stalkie_big_nohaplotig	exon	155943949	155944250	99	+	.	Parent=FBgn0014024.1.mrna1;Target=FBgn0014024.1 82 383 +
Chr1	stalkie_big_nohaplotig	exon	155944308	155944483	100	+	.	Parent=FBgn0014024.1.mrna1;Target=FBgn0014024.1 384 559 +
Chr1	stalkie_big_nohaplotig	exon	155944547	155944706	100	+	.	Parent=FBgn0014024.1.mrna1;Target=FBgn0014024.1 560 719 +
Chr1	stalkie_big_nohaplotig	exon	155944792	155945464	99	+	.	Parent=FBgn0014024.1.mrna1;Target=FBgn0014024.1 720 1392 +
Chr1	stalkie_big_nohaplotig	exon	155945556	155945721	100	+	.	Parent=FBgn0014024.1.mrna1;Target=FBgn0014024.1 1393 1558 +
Chr1	stalkie_big_nohaplotig	exon	155945783	155945867	100	+	.	Parent=FBgn0014024.1.mrna1;Target=FBgn0014024.1 1559 1643 +
Chr1	stalkie_big_nohaplotig	exon	155945926	155946216	99	+	.	Parent=FBgn0014024.1.mrna1;Target=FBgn0014024.1 1644 1935 +
Chr1	stalkie_big_nohaplotig	CDS	155943806	155943886	.	+	0	Parent=FBgn0014024.1.mrna1;Target=FBgn0014024.1 1 81 +
Chr1	stalkie_big_nohaplotig	CDS	155943949	155944250	.	+	0	Parent=FBgn0014024.1.mrna1;Target=FBgn0014024.1 82 383 +
Chr1	stalkie_big_nohaplotig	CDS	155944308	155944483	.	+	1	Parent=FBgn0014024.1.mrna1;Target=FBgn0014024.1 384 559 +
Chr1	stalkie_big_nohaplotig	CDS	155944547	155944706	.	+	2	Parent=FBgn0014024.1.mrna1;Target=FBgn0014024.1 560 719 +
Chr1	stalkie_big_nohaplotig	CDS	155944792	155945464	.	+	1	Parent=FBgn0014024.1.mrna1;Target=FBgn0014024.1 720 1392 +
Chr1	stalkie_big_nohaplotig	CDS	155945556	155945721	.	+	0	Parent=FBgn0014024.1.mrna1;Target=FBgn0014024.1 1393 1558 +
Chr1	stalkie_big_nohaplotig	CDS	155945783	155945867	.	+	2	Parent=FBgn0014024.1.mrna1;Target=FBgn0014024.1 1559 1643 +
Chr1	stalkie_big_nohaplotig	CDS	155945926	155946216	.	+	1	Parent=FBgn0014024.1.mrna1;Target=FBgn0014024.1 1644 1935 +
Chr1	gffcl	locus	155947626	157789712	.	+	.	ID=RLOC_00012815;geneIDs=FBgn0263237.1.path1,comp151416_c0_seq1.path1,comp156499_c0_seq1.path1;transcripts=FBgn0263237.1.mrna1,comp156499_c0_seq1.mrna1,comp151416_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155947626	156025362	.	+	.	ID=FBgn0263237.1.mrna1;geneID=FBgn0263237.1.path1;Name=FBgn0263237.1;Dir=indeterminatecoverage=89.1;identity=100.0;matches=891;mismatches=0;indels=0;unknowns=3;locus=RLOC_00012815
Chr1	stalkie_big_nohaplotig	exon	155947626	155947628	100	+	.	Parent=FBgn0263237.1.mrna1;Target=FBgn0263237.1 114 112 .
Chr1	stalkie_big_nohaplotig	exon	155962387	155962397	100	+	.	Parent=FBgn0263237.1.mrna1;Target=FBgn0263237.1 125 115 .
Chr1	stalkie_big_nohaplotig	exon	155968046	155968053	100	+	.	Parent=FBgn0263237.1.mrna1;Target=FBgn0263237.1 133 126 .
Chr1	stalkie_big_nohaplotig	exon	155990882	155990889	100	+	.	Parent=FBgn0263237.1.mrna1;Target=FBgn0263237.1 141 134 .
Chr1	stalkie_big_nohaplotig	exon	155994928	155994934	100	+	.	Parent=FBgn0263237.1.mrna1;Target=FBgn0263237.1 157 151 .
Chr1	stalkie_big_nohaplotig	exon	156024506	156025362	100	+	.	Parent=FBgn0263237.1.mrna1;Target=FBgn0263237.1 1014 158 .
Chr1	stalkie_big_nohaplotig	CDS	155947626	155947628	.	+	0	Parent=FBgn0263237.1.mrna1;Target=FBgn0263237.1 114 112 .
Chr1	stalkie_big_nohaplotig	CDS	155962387	155962397	.	+	0	Parent=FBgn0263237.1.mrna1;Target=FBgn0263237.1 125 115 .
Chr1	stalkie_big_nohaplotig	CDS	155968046	155968053	.	+	1	Parent=FBgn0263237.1.mrna1;Target=FBgn0263237.1 133 126 .
Chr1	stalkie_big_nohaplotig	CDS	155990882	155990889	.	+	2	Parent=FBgn0263237.1.mrna1;Target=FBgn0263237.1 141 134 .
Chr1	stalkie_big_nohaplotig	CDS	155994928	155994934	.	+	0	Parent=FBgn0263237.1.mrna1;Target=FBgn0263237.1 157 151 .
Chr1	stalkie_big_nohaplotig	CDS	156024506	156025362	.	+	2	Parent=FBgn0263237.1.mrna1;Target=FBgn0263237.1 1014 158 .
Chr1	stalkie_big_nohaplotig	mRNA	156024509	156096588	.	+	.	ID=comp156499_c0_seq1.mrna1;geneID=comp156499_c0_seq1.path1;Name=comp156499_c0_seq1;Dir=antisensecoverage=71.6;identity=87.9;matches=1123;mismatches=47;indels=108;unknowns=0;Target=comp156499_c0_seq1 651 1505 .;locus=RLOC_00012815
Chr1	stalkie_big_nohaplotig	exon	156024509	156025442	98	+	.	Parent=comp156499_c0_seq1.mrna1;Target=comp156499_c0_seq1 557 1507 -
Chr1	stalkie_big_nohaplotig	exon	156026162	156026166	100	+	.	Parent=comp156499_c0_seq1.mrna1;Target=comp156499_c0_seq1 552 556 -
Chr1	stalkie_big_nohaplotig	exon	156027330	156027331	100	+	.	Parent=comp156499_c0_seq1.mrna1;Target=comp156499_c0_seq1 550 551 -
Chr1	stalkie_big_nohaplotig	exon	156031060	156031088	58	+	.	Parent=comp156499_c0_seq1.mrna1;Target=comp156499_c0_seq1 472 512 -
Chr1	stalkie_big_nohaplotig	exon	156035347	156035422	46	+	.	Parent=comp156499_c0_seq1.mrna1;Target=comp156499_c0_seq1 379 471 -
Chr1	stalkie_big_nohaplotig	exon	156039651	156039660	14	+	.	Parent=comp156499_c0_seq1.mrna1;Target=comp156499_c0_seq1 309 378 -
Chr1	stalkie_big_nohaplotig	exon	156040025	156040026	100	+	.	Parent=comp156499_c0_seq1.mrna1;Target=comp156499_c0_seq1 307 308 -
Chr1	stalkie_big_nohaplotig	exon	156042766	156042769	100	+	.	Parent=comp156499_c0_seq1.mrna1;Target=comp156499_c0_seq1 303 306 -
Chr1	stalkie_big_nohaplotig	exon	156046365	156046375	90	+	.	Parent=comp156499_c0_seq1.mrna1;Target=comp156499_c0_seq1 231 241 -
Chr1	stalkie_big_nohaplotig	exon	156051378	156051380	100	+	.	Parent=comp156499_c0_seq1.mrna1;Target=comp156499_c0_seq1 228 230 -
Chr1	stalkie_big_nohaplotig	exon	156052421	156052430	90	+	.	Parent=comp156499_c0_seq1.mrna1;Target=comp156499_c0_seq1 218 227 -
Chr1	stalkie_big_nohaplotig	exon	156058060	156058067	100	+	.	Parent=comp156499_c0_seq1.mrna1;Target=comp156499_c0_seq1 209 216 -
Chr1	stalkie_big_nohaplotig	exon	156061221	156061230	90	+	.	Parent=comp156499_c0_seq1.mrna1;Target=comp156499_c0_seq1 190 199 -
Chr1	stalkie_big_nohaplotig	exon	156062317	156062326	100	+	.	Parent=comp156499_c0_seq1.mrna1;Target=comp156499_c0_seq1 180 189 -
Chr1	stalkie_big_nohaplotig	exon	156063113	156063128	75	+	.	Parent=comp156499_c0_seq1.mrna1;Target=comp156499_c0_seq1 164 179 -
Chr1	stalkie_big_nohaplotig	exon	156078019	156078020	100	+	.	Parent=comp156499_c0_seq1.mrna1;Target=comp156499_c0_seq1 162 163 -
Chr1	stalkie_big_nohaplotig	exon	156082381	156082385	100	+	.	Parent=comp156499_c0_seq1.mrna1;Target=comp156499_c0_seq1 157 161 -
Chr1	stalkie_big_nohaplotig	exon	156087629	156087640	100	+	.	Parent=comp156499_c0_seq1.mrna1;Target=comp156499_c0_seq1 145 156 -
Chr1	stalkie_big_nohaplotig	exon	156092740	156092746	100	+	.	Parent=comp156499_c0_seq1.mrna1;Target=comp156499_c0_seq1 138 144 -
Chr1	stalkie_big_nohaplotig	exon	156096578	156096588	81	+	.	Parent=comp156499_c0_seq1.mrna1;Target=comp156499_c0_seq1 127 137 -
Chr1	stalkie_big_nohaplotig	CDS	156024511	156025365	.	+	0	Parent=comp156499_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156025990	157789712	.	+	.	ID=comp151416_c0_seq1.mrna1;geneID=comp151416_c0_seq1.path1;Name=comp151416_c0_seq1;Dir=indeterminatecoverage=89.8;identity=97.9;matches=426;mismatches=3;indels=6;unknowns=0;locus=RLOC_00012815
Chr1	stalkie_big_nohaplotig	exon	156025990	156026302	99	+	.	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 315 3 .
Chr1	stalkie_big_nohaplotig	exon	157608340	157608341	100	+	.	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 324 323 .
Chr1	stalkie_big_nohaplotig	exon	157613871	157613873	100	+	.	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 327 325 .
Chr1	stalkie_big_nohaplotig	exon	157637347	157637352	100	+	.	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 333 328 .
Chr1	stalkie_big_nohaplotig	exon	157641827	157641833	100	+	.	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 340 334 .
Chr1	stalkie_big_nohaplotig	exon	157648688	157648690	100	+	.	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 343 341 .
Chr1	stalkie_big_nohaplotig	exon	157655963	157655971	100	+	.	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 352 344 .
Chr1	stalkie_big_nohaplotig	exon	157661234	157661240	100	+	.	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 359 353 .
Chr1	stalkie_big_nohaplotig	exon	157667042	157667052	100	+	.	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 370 360 .
Chr1	stalkie_big_nohaplotig	exon	157670177	157670182	100	+	.	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 383 378 .
Chr1	stalkie_big_nohaplotig	exon	157679664	157679666	100	+	.	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 386 384 .
Chr1	stalkie_big_nohaplotig	exon	157686154	157686156	100	+	.	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 389 387 .
Chr1	stalkie_big_nohaplotig	exon	157690280	157690288	100	+	.	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 398 390 .
Chr1	stalkie_big_nohaplotig	exon	157734868	157734873	100	+	.	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 405 400 .
Chr1	stalkie_big_nohaplotig	exon	157772172	157772179	100	+	.	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 413 406 .
Chr1	stalkie_big_nohaplotig	exon	157779812	157779820	100	+	.	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 422 414 .
Chr1	stalkie_big_nohaplotig	exon	157787616	157787631	62	+	.	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 432 423 .
Chr1	stalkie_big_nohaplotig	exon	157789668	157789676	100	+	.	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 441 433 .
Chr1	stalkie_big_nohaplotig	exon	157789709	157789712	100	+	.	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 487 484 .
Chr1	stalkie_big_nohaplotig	CDS	157661235	157661240	.	+	0	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 359 354 .
Chr1	stalkie_big_nohaplotig	CDS	157667042	157667052	.	+	0	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 370 360 .
Chr1	stalkie_big_nohaplotig	CDS	157670177	157670182	.	+	1	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 383 378 .
Chr1	stalkie_big_nohaplotig	CDS	157679664	157679666	.	+	1	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 386 384 .
Chr1	stalkie_big_nohaplotig	CDS	157686154	157686156	.	+	1	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 389 387 .
Chr1	stalkie_big_nohaplotig	CDS	157690280	157690288	.	+	1	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 398 390 .
Chr1	stalkie_big_nohaplotig	CDS	157734868	157734873	.	+	1	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 405 400 .
Chr1	stalkie_big_nohaplotig	CDS	157772172	157772176	.	+	1	Parent=comp151416_c0_seq1.mrna1;Target=comp151416_c0_seq1 410 406 .
Chr1	gffcl	locus	155947775	155949058	.	-	.	ID=RLOC_00012816;geneIDs=FBgn0029755.1.path1;transcripts=FBgn0029755.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155947775	155949058	.	-	.	ID=FBgn0029755.1.mrna1;geneID=FBgn0029755.1.path1;Name=FBgn0029755.1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1272;mismatches=12;indels=0;unknowns=0;Target=FBgn0029755.1 1284 1 .;locus=RLOC_00012816
Chr1	stalkie_big_nohaplotig	exon	155947775	155949058	99	-	.	Parent=FBgn0029755.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	155947775	155949058	.	-	0	Parent=FBgn0029755.1.mrna1
Chr1	gffcl	locus	155973745	155974142	.	-	.	ID=RLOC_00012817;geneIDs=comp132718_c1_seq1.path1;transcripts=comp132718_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	155973745	155974142	.	-	.	ID=comp132718_c1_seq1.mrna1;geneID=comp132718_c1_seq1.path1;Name=comp132718_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=396;mismatches=2;indels=0;unknowns=0;Target=comp132718_c1_seq1 398 1 .;CDS_Target=comp132718_c1_seq1 228 1 .;locus=RLOC_00012817
Chr1	stalkie_big_nohaplotig	exon	155973745	155974142	99	-	.	Parent=comp132718_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	155973915	155974142	.	-	0	Parent=comp132718_c1_seq1.mrna1
Chr1	gffcl	locus	156012699	156016463	.	+	.	ID=RLOC_00012819;geneIDs=FBgn0002590.1.path1;transcripts=FBgn0002590.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156012699	156016463	.	+	.	ID=FBgn0002590.1.mrna1;geneID=FBgn0002590.1.path1;Name=FBgn0002590.1;Dir=sensecoverage=100.0;identity=99.9;matches=698;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012819
Chr1	stalkie_big_nohaplotig	exon	156012699	156012715	100	+	.	Parent=FBgn0002590.1.mrna1;Target=FBgn0002590.1 1 17 +
Chr1	stalkie_big_nohaplotig	exon	156013536	156013935	99	+	.	Parent=FBgn0002590.1.mrna1;Target=FBgn0002590.1 18 417 +
Chr1	stalkie_big_nohaplotig	exon	156014188	156014304	100	+	.	Parent=FBgn0002590.1.mrna1;Target=FBgn0002590.1 418 534 +
Chr1	stalkie_big_nohaplotig	exon	156014543	156014641	100	+	.	Parent=FBgn0002590.1.mrna1;Target=FBgn0002590.1 535 633 +
Chr1	stalkie_big_nohaplotig	exon	156016398	156016463	100	+	.	Parent=FBgn0002590.1.mrna1;Target=FBgn0002590.1 634 699 +
Chr1	stalkie_big_nohaplotig	CDS	156012699	156012715	.	+	0	Parent=FBgn0002590.1.mrna1;Target=FBgn0002590.1 1 17 +
Chr1	stalkie_big_nohaplotig	CDS	156013536	156013935	.	+	1	Parent=FBgn0002590.1.mrna1;Target=FBgn0002590.1 18 417 +
Chr1	stalkie_big_nohaplotig	CDS	156014188	156014304	.	+	0	Parent=FBgn0002590.1.mrna1;Target=FBgn0002590.1 418 534 +
Chr1	stalkie_big_nohaplotig	CDS	156014543	156014641	.	+	0	Parent=FBgn0002590.1.mrna1;Target=FBgn0002590.1 535 633 +
Chr1	stalkie_big_nohaplotig	CDS	156016398	156016463	.	+	0	Parent=FBgn0002590.1.mrna1;Target=FBgn0002590.1 634 699 +
Chr1	gffcl	locus	156017992	156018774	.	+	.	ID=RLOC_00012820;geneIDs=FBgn0028581.1.path1;transcripts=FBgn0028581.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156017992	156018774	.	+	.	ID=FBgn0028581.1.mrna1;geneID=FBgn0028581.1.path1;Name=FBgn0028581.1;Dir=sensecoverage=100.0;identity=99.0;matches=606;mismatches=5;indels=1;unknowns=0;locus=RLOC_00012820
Chr1	stalkie_big_nohaplotig	exon	156017992	156018086	98	+	.	Parent=FBgn0028581.1.mrna1;Target=FBgn0028581.1 1 95 +
Chr1	stalkie_big_nohaplotig	exon	156018183	156018635	99	+	.	Parent=FBgn0028581.1.mrna1;Target=FBgn0028581.1 96 548 +
Chr1	stalkie_big_nohaplotig	exon	156018712	156018774	98	+	.	Parent=FBgn0028581.1.mrna1;Target=FBgn0028581.1 549 612 +
Chr1	stalkie_big_nohaplotig	CDS	156017992	156018086	.	+	0	Parent=FBgn0028581.1.mrna1;Target=FBgn0028581.1 1 95 +
Chr1	stalkie_big_nohaplotig	CDS	156018183	156018635	.	+	1	Parent=FBgn0028581.1.mrna1;Target=FBgn0028581.1 96 548 +
Chr1	stalkie_big_nohaplotig	CDS	156018712	156018774	.	+	1	Parent=FBgn0028581.1.mrna1;Target=FBgn0028581.1 549 612 +
Chr1	gffcl	locus	156028613	156046177	.	-	.	ID=RLOC_00012821;geneIDs=ORF1548.path1,FBgn0037989.1.path1;transcripts=FBgn0037989.1.mrna1,ORF1548.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156028613	156043113	.	-	.	ID=FBgn0037989.1.mrna1;geneID=FBgn0037989.1.path1;Name=FBgn0037989.1;Dir=sensecoverage=100.0;identity=99.8;matches=2998;mismatches=5;indels=0;unknowns=0;locus=RLOC_00012821
Chr1	stalkie_big_nohaplotig	exon	156028613	156028705	100	-	.	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 2911 3003 +
Chr1	stalkie_big_nohaplotig	exon	156028767	156028990	99	-	.	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 2687 2910 +
Chr1	stalkie_big_nohaplotig	exon	156029796	156029947	100	-	.	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 2535 2686 +
Chr1	stalkie_big_nohaplotig	exon	156030002	156030157	100	-	.	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 2379 2534 +
Chr1	stalkie_big_nohaplotig	exon	156031615	156031792	100	-	.	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 2201 2378 +
Chr1	stalkie_big_nohaplotig	exon	156031865	156032017	100	-	.	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 2048 2200 +
Chr1	stalkie_big_nohaplotig	exon	156032573	156032849	99	-	.	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 1771 2047 +
Chr1	stalkie_big_nohaplotig	exon	156032927	156033100	100	-	.	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 1597 1770 +
Chr1	stalkie_big_nohaplotig	exon	156033171	156033461	100	-	.	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 1306 1596 +
Chr1	stalkie_big_nohaplotig	exon	156038247	156038495	100	-	.	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 1057 1305 +
Chr1	stalkie_big_nohaplotig	exon	156038552	156038686	100	-	.	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 922 1056 +
Chr1	stalkie_big_nohaplotig	exon	156038744	156038827	100	-	.	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 838 921 +
Chr1	stalkie_big_nohaplotig	exon	156038897	156039340	100	-	.	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 394 837 +
Chr1	stalkie_big_nohaplotig	exon	156039535	156039627	100	-	.	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 301 393 +
Chr1	stalkie_big_nohaplotig	exon	156041553	156041765	100	-	.	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 88 300 +
Chr1	stalkie_big_nohaplotig	exon	156043027	156043113	97	-	.	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 1 87 +
Chr1	stalkie_big_nohaplotig	CDS	156028613	156028705	.	-	0	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 2911 3003 +
Chr1	stalkie_big_nohaplotig	CDS	156028767	156028990	.	-	2	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 2687 2910 +
Chr1	stalkie_big_nohaplotig	CDS	156029796	156029947	.	-	1	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 2535 2686 +
Chr1	stalkie_big_nohaplotig	CDS	156030002	156030157	.	-	1	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 2379 2534 +
Chr1	stalkie_big_nohaplotig	CDS	156031615	156031792	.	-	2	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 2201 2378 +
Chr1	stalkie_big_nohaplotig	CDS	156031865	156032017	.	-	2	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 2048 2200 +
Chr1	stalkie_big_nohaplotig	CDS	156032573	156032849	.	-	0	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 1771 2047 +
Chr1	stalkie_big_nohaplotig	CDS	156032927	156033100	.	-	0	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 1597 1770 +
Chr1	stalkie_big_nohaplotig	CDS	156033171	156033461	.	-	0	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 1306 1596 +
Chr1	stalkie_big_nohaplotig	CDS	156038247	156038495	.	-	0	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 1057 1305 +
Chr1	stalkie_big_nohaplotig	CDS	156038552	156038686	.	-	0	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 922 1056 +
Chr1	stalkie_big_nohaplotig	CDS	156038744	156038827	.	-	0	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 838 921 +
Chr1	stalkie_big_nohaplotig	CDS	156038897	156039340	.	-	0	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 394 837 +
Chr1	stalkie_big_nohaplotig	CDS	156039535	156039627	.	-	0	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 301 393 +
Chr1	stalkie_big_nohaplotig	CDS	156041553	156041765	.	-	0	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 88 300 +
Chr1	stalkie_big_nohaplotig	CDS	156043027	156043113	.	-	0	Parent=FBgn0037989.1.mrna1;Target=FBgn0037989.1 1 87 +
Chr1	stalkie_big_nohaplotig	mRNA	156043063	156046177	.	-	.	ID=ORF1548.mrna1;geneID=ORF1548.path1;Name=ORF1548;Dir=sensecoverage=100.0;identity=99.7;matches=1062;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012821
Chr1	stalkie_big_nohaplotig	exon	156043063	156043085	100	-	.	Parent=ORF1548.mrna1;Target=ORF1548 1043 1065 +
Chr1	stalkie_big_nohaplotig	exon	156045136	156046177	99	-	.	Parent=ORF1548.mrna1;Target=ORF1548 1 1042 +
Chr1	stalkie_big_nohaplotig	CDS	156043063	156043085	.	-	2	Parent=ORF1548.mrna1;Target=ORF1548 1043 1065 +
Chr1	stalkie_big_nohaplotig	CDS	156045136	156046177	.	-	0	Parent=ORF1548.mrna1;Target=ORF1548 1 1042 +
Chr1	stalkie_big_nohaplotig	mRNA	156095875	156095944	.	-	.	ID=comp145228_c1_seq1.mrna2;geneID=comp145228_c1_seq1.path2;Name=comp145228_c1_seq1;Dir=indeterminatecoverage=8.4;identity=100.0;matches=70;mismatches=0;indels=0;unknowns=0;Target=comp145228_c1_seq1 830 761 .;locus=RLOC_00012822
Chr1	stalkie_big_nohaplotig	exon	156095875	156095944	100	-	.	Parent=comp145228_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	156110366	156112937	.	-	.	ID=comp152831_c1_seq1.mrna1;geneID=comp152831_c1_seq1.path1;Name=comp152831_c1_seq1;Dir=antisensecoverage=100.0;identity=95.6;matches=431;mismatches=16;indels=4;unknowns=0;Target=comp152831_c1_seq1 233 292 .;locus=RLOC_00012822
Chr1	stalkie_big_nohaplotig	exon	156110366	156110387	100	-	.	Parent=comp152831_c1_seq1.mrna1;Target=comp152831_c1_seq1 1 22 -
Chr1	stalkie_big_nohaplotig	exon	156112509	156112937	95	-	.	Parent=comp152831_c1_seq1.mrna1;Target=comp152831_c1_seq1 23 447 -
Chr1	stalkie_big_nohaplotig	CDS	156112719	156112781	.	-	0	Parent=comp152831_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157909953	157970827	.	-	.	ID=comp158151_c1_seq1.mrna1;geneID=comp158151_c1_seq1.path1;Name=comp158151_c1_seq1;Dir=indeterminatecoverage=38.5;identity=99.6;matches=761;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012822
Chr1	stalkie_big_nohaplotig	exon	157909953	157910078	100	-	.	Parent=comp158151_c1_seq1.mrna1;Target=comp158151_c1_seq1 899 774 .
Chr1	stalkie_big_nohaplotig	exon	157911309	157911483	98	-	.	Parent=comp158151_c1_seq1.mrna1;Target=comp158151_c1_seq1 773 599 .
Chr1	stalkie_big_nohaplotig	exon	157920674	157921103	100	-	.	Parent=comp158151_c1_seq1.mrna1;Target=comp158151_c1_seq1 598 169 .
Chr1	stalkie_big_nohaplotig	exon	157932456	157932462	100	-	.	Parent=comp158151_c1_seq1.mrna1;Target=comp158151_c1_seq1 168 162 .
Chr1	stalkie_big_nohaplotig	exon	157936876	157936882	100	-	.	Parent=comp158151_c1_seq1.mrna1;Target=comp158151_c1_seq1 161 155 .
Chr1	stalkie_big_nohaplotig	exon	157942383	157942384	100	-	.	Parent=comp158151_c1_seq1.mrna1;Target=comp158151_c1_seq1 154 153 .
Chr1	stalkie_big_nohaplotig	exon	157948409	157948410	100	-	.	Parent=comp158151_c1_seq1.mrna1;Target=comp158151_c1_seq1 152 151 .
Chr1	stalkie_big_nohaplotig	exon	157951025	157951027	100	-	.	Parent=comp158151_c1_seq1.mrna1;Target=comp158151_c1_seq1 150 148 .
Chr1	stalkie_big_nohaplotig	exon	157961880	157961881	100	-	.	Parent=comp158151_c1_seq1.mrna1;Target=comp158151_c1_seq1 147 146 .
Chr1	stalkie_big_nohaplotig	exon	157964704	157964706	100	-	.	Parent=comp158151_c1_seq1.mrna1;Target=comp158151_c1_seq1 145 143 .
Chr1	stalkie_big_nohaplotig	exon	157970821	157970827	100	-	.	Parent=comp158151_c1_seq1.mrna1;Target=comp158151_c1_seq1 142 136 .
Chr1	stalkie_big_nohaplotig	CDS	157920916	157921103	.	-	2	Parent=comp158151_c1_seq1.mrna1;Target=comp158151_c1_seq1 356 169 .
Chr1	stalkie_big_nohaplotig	CDS	157932456	157932462	.	-	0	Parent=comp158151_c1_seq1.mrna1;Target=comp158151_c1_seq1 168 162 .
Chr1	stalkie_big_nohaplotig	CDS	157936876	157936882	.	-	1	Parent=comp158151_c1_seq1.mrna1;Target=comp158151_c1_seq1 161 155 .
Chr1	stalkie_big_nohaplotig	CDS	157942383	157942384	.	-	0	Parent=comp158151_c1_seq1.mrna1;Target=comp158151_c1_seq1 154 153 .
Chr1	stalkie_big_nohaplotig	CDS	157948409	157948410	.	-	2	Parent=comp158151_c1_seq1.mrna1;Target=comp158151_c1_seq1 152 151 .
Chr1	stalkie_big_nohaplotig	CDS	157951025	157951027	.	-	2	Parent=comp158151_c1_seq1.mrna1;Target=comp158151_c1_seq1 150 148 .
Chr1	stalkie_big_nohaplotig	CDS	157961880	157961881	.	-	1	Parent=comp158151_c1_seq1.mrna1;Target=comp158151_c1_seq1 147 146 .
Chr1	stalkie_big_nohaplotig	CDS	157964704	157964706	.	-	1	Parent=comp158151_c1_seq1.mrna1;Target=comp158151_c1_seq1 145 143 .
Chr1	stalkie_big_nohaplotig	CDS	157970821	157970825	.	-	0	Parent=comp158151_c1_seq1.mrna1;Target=comp158151_c1_seq1 142 138 .
Chr1	gffcl	locus	156095964	156096393	.	-	.	ID=RLOC_00012823;geneIDs=comp157659_c0_seq1.path1;transcripts=comp157659_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156095964	156096393	.	-	.	ID=comp157659_c0_seq1.mrna1;geneID=comp157659_c0_seq1.path1;Name=comp157659_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=421;mismatches=7;indels=4;unknowns=0;Target=comp157659_c0_seq1 430 1 .;CDS_Target=comp157659_c0_seq1 101 3 .;locus=RLOC_00012823
Chr1	stalkie_big_nohaplotig	exon	156095964	156096393	97	-	.	Parent=comp157659_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156096293	156096391	.	-	0	Parent=comp157659_c0_seq1.mrna1
Chr1	gffcl	locus	156114614	156116449	.	+	.	ID=RLOC_00012824;geneIDs=FBgn0030692.1.path1;transcripts=FBgn0030692.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156114614	156116449	.	+	.	ID=FBgn0030692.1.mrna1;geneID=FBgn0030692.1.path1;Name=FBgn0030692.1;Dir=sensecoverage=100.0;identity=99.5;matches=1696;mismatches=8;indels=0;unknowns=0;locus=RLOC_00012824
Chr1	stalkie_big_nohaplotig	exon	156114614	156115104	99	+	.	Parent=FBgn0030692.1.mrna1;Target=FBgn0030692.1 1 491 +
Chr1	stalkie_big_nohaplotig	exon	156115167	156115606	99	+	.	Parent=FBgn0030692.1.mrna1;Target=FBgn0030692.1 492 931 +
Chr1	stalkie_big_nohaplotig	exon	156115677	156116449	99	+	.	Parent=FBgn0030692.1.mrna1;Target=FBgn0030692.1 932 1704 +
Chr1	stalkie_big_nohaplotig	CDS	156114614	156115104	.	+	0	Parent=FBgn0030692.1.mrna1;Target=FBgn0030692.1 1 491 +
Chr1	stalkie_big_nohaplotig	CDS	156115167	156115606	.	+	1	Parent=FBgn0030692.1.mrna1;Target=FBgn0030692.1 492 931 +
Chr1	stalkie_big_nohaplotig	CDS	156115677	156116449	.	+	2	Parent=FBgn0030692.1.mrna1;Target=FBgn0030692.1 932 1704 +
Chr1	gffcl	locus	156117757	156119701	.	.	.	ID=RLOC_00012825;geneIDs=comp149590_c0_seq1.path1,comp160585_c0_seq1.path1;transcripts=comp160585_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156118611	156119701	.	+	.	ID=comp160585_c0_seq1.mrna1;geneID=comp160585_c0_seq1.path1;Name=comp160585_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=1063;mismatches=28;indels=2;unknowns=0;Target=comp160585_c0_seq1 1093 1 .;CDS_Target=comp160585_c0_seq1 675 574 .;locus=RLOC_00012825
Chr1	stalkie_big_nohaplotig	exon	156118611	156119701	97	+	.	Parent=comp160585_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156119184	156119285	.	+	0	Parent=comp160585_c0_seq1.mrna1
Chr1	gffcl	locus	156120430	156120682	.	+	.	ID=RLOC_00012826;geneIDs=comp137399_c0_seq1.path1;transcripts=comp137399_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156120430	156120682	.	+	.	ID=comp137399_c0_seq1.mrna1;geneID=comp137399_c0_seq1.path1;Name=comp137399_c0_seq1;Dir=indeterminatecoverage=95.8;identity=97.6;matches=248;mismatches=5;indels=1;unknowns=0;Target=comp137399_c0_seq1 263 10 .;CDS_Target=comp137399_c0_seq1 67 11 .;locus=RLOC_00012826
Chr1	stalkie_big_nohaplotig	exon	156120430	156120682	97	+	.	Parent=comp137399_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156120431	156120487	.	+	0	Parent=comp137399_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156121132	156834551	.	+	.	ID=comp154278_c0_seq1.mrna1;geneID=comp154278_c0_seq1.path1;Name=comp154278_c0_seq1;Dir=indeterminatecoverage=84.2;identity=92.4;matches=424;mismatches=7;indels=28;unknowns=0;Target=comp154278_c0_seq1 457 452 .;locus=RLOC_00012827
Chr1	stalkie_big_nohaplotig	exon	156121132	156121439	88	+	.	Parent=comp154278_c0_seq1.mrna1;Target=comp154278_c0_seq1 315 22 .
Chr1	stalkie_big_nohaplotig	exon	156750375	156750379	100	+	.	Parent=comp154278_c0_seq1.mrna1;Target=comp154278_c0_seq1 418 414 .
Chr1	stalkie_big_nohaplotig	exon	156755584	156755592	100	+	.	Parent=comp154278_c0_seq1.mrna1;Target=comp154278_c0_seq1 427 419 .
Chr1	stalkie_big_nohaplotig	exon	156757280	156757289	100	+	.	Parent=comp154278_c0_seq1.mrna1;Target=comp154278_c0_seq1 437 428 .
Chr1	stalkie_big_nohaplotig	exon	156763785	156763793	100	+	.	Parent=comp154278_c0_seq1.mrna1;Target=comp154278_c0_seq1 449 441 .
Chr1	stalkie_big_nohaplotig	exon	156765380	156765387	100	+	.	Parent=comp154278_c0_seq1.mrna1;Target=comp154278_c0_seq1 457 450 .
Chr1	stalkie_big_nohaplotig	exon	156765392	156765399	100	+	.	Parent=comp154278_c0_seq1.mrna1;Target=comp154278_c0_seq1 477 470 .
Chr1	stalkie_big_nohaplotig	exon	156765668	156765677	100	+	.	Parent=comp154278_c0_seq1.mrna1;Target=comp154278_c0_seq1 502 493 .
Chr1	stalkie_big_nohaplotig	exon	156770508	156770514	100	+	.	Parent=comp154278_c0_seq1.mrna1;Target=comp154278_c0_seq1 516 510 .
Chr1	stalkie_big_nohaplotig	exon	156779091	156779102	100	+	.	Parent=comp154278_c0_seq1.mrna1;Target=comp154278_c0_seq1 528 517 .
Chr1	stalkie_big_nohaplotig	exon	156781311	156781316	100	+	.	Parent=comp154278_c0_seq1.mrna1;Target=comp154278_c0_seq1 537 532 .
Chr1	stalkie_big_nohaplotig	exon	156784644	156784645	100	+	.	Parent=comp154278_c0_seq1.mrna1;Target=comp154278_c0_seq1 539 538 .
Chr1	stalkie_big_nohaplotig	exon	156785437	156785445	100	+	.	Parent=comp154278_c0_seq1.mrna1;Target=comp154278_c0_seq1 548 540 .
Chr1	stalkie_big_nohaplotig	exon	156792564	156792571	100	+	.	Parent=comp154278_c0_seq1.mrna1;Target=comp154278_c0_seq1 571 564 .
Chr1	stalkie_big_nohaplotig	exon	156799455	156799461	100	+	.	Parent=comp154278_c0_seq1.mrna1;Target=comp154278_c0_seq1 578 572 .
Chr1	stalkie_big_nohaplotig	exon	156804164	156804167	100	+	.	Parent=comp154278_c0_seq1.mrna1;Target=comp154278_c0_seq1 582 579 .
Chr1	stalkie_big_nohaplotig	exon	156816978	156816989	100	+	.	Parent=comp154278_c0_seq1.mrna1;Target=comp154278_c0_seq1 594 583 .
Chr1	stalkie_big_nohaplotig	exon	156823557	156823559	100	+	.	Parent=comp154278_c0_seq1.mrna1;Target=comp154278_c0_seq1 602 600 .
Chr1	stalkie_big_nohaplotig	exon	156824951	156824953	100	+	.	Parent=comp154278_c0_seq1.mrna1;Target=comp154278_c0_seq1 605 603 .
Chr1	stalkie_big_nohaplotig	exon	156829320	156829329	100	+	.	Parent=comp154278_c0_seq1.mrna1;Target=comp154278_c0_seq1 615 606 .
Chr1	stalkie_big_nohaplotig	exon	156834550	156834551	100	+	.	Parent=comp154278_c0_seq1.mrna1;Target=comp154278_c0_seq1 617 616 .
Chr1	stalkie_big_nohaplotig	CDS	156765382	156765387	.	+	0	Parent=comp154278_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156798834	156800113	.	+	.	ID=FBgn0030510.1.mrna1;geneID=FBgn0030510.1.path1;Name=FBgn0030510.1;Dir=sensecoverage=100.0;identity=99.2;matches=994;mismatches=8;indels=0;unknowns=0;locus=RLOC_00012827
Chr1	stalkie_big_nohaplotig	exon	156798834	156799037	99	+	.	Parent=FBgn0030510.1.mrna1;Target=FBgn0030510.1 1 204 +
Chr1	stalkie_big_nohaplotig	exon	156799106	156799285	98	+	.	Parent=FBgn0030510.1.mrna1;Target=FBgn0030510.1 205 384 +
Chr1	stalkie_big_nohaplotig	exon	156799373	156799496	99	+	.	Parent=FBgn0030510.1.mrna1;Target=FBgn0030510.1 385 508 +
Chr1	stalkie_big_nohaplotig	exon	156799563	156799705	100	+	.	Parent=FBgn0030510.1.mrna1;Target=FBgn0030510.1 509 651 +
Chr1	stalkie_big_nohaplotig	exon	156799763	156800113	99	+	.	Parent=FBgn0030510.1.mrna1;Target=FBgn0030510.1 652 1002 +
Chr1	stalkie_big_nohaplotig	CDS	156798834	156799037	.	+	0	Parent=FBgn0030510.1.mrna1;Target=FBgn0030510.1 1 204 +
Chr1	stalkie_big_nohaplotig	CDS	156799106	156799285	.	+	0	Parent=FBgn0030510.1.mrna1;Target=FBgn0030510.1 205 384 +
Chr1	stalkie_big_nohaplotig	CDS	156799373	156799496	.	+	0	Parent=FBgn0030510.1.mrna1;Target=FBgn0030510.1 385 508 +
Chr1	stalkie_big_nohaplotig	CDS	156799563	156799705	.	+	2	Parent=FBgn0030510.1.mrna1;Target=FBgn0030510.1 509 651 +
Chr1	stalkie_big_nohaplotig	CDS	156799763	156800113	.	+	0	Parent=FBgn0030510.1.mrna1;Target=FBgn0030510.1 652 1002 +
Chr1	gffcl	locus	156124792	156125605	.	-	.	ID=RLOC_00012828;geneIDs=FBgn0000360.1.path2;transcripts=FBgn0000360.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	156124792	156125605	.	-	.	ID=FBgn0000360.1.mrna2;geneID=FBgn0000360.1.path2;Name=FBgn0000360.1;Dir=sensecoverage=100.0;identity=99.9;matches=737;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012828
Chr1	stalkie_big_nohaplotig	exon	156124792	156125478	100	-	.	Parent=FBgn0000360.1.mrna2;Target=FBgn0000360.1 52 738 +
Chr1	stalkie_big_nohaplotig	exon	156125555	156125605	98	-	.	Parent=FBgn0000360.1.mrna2;Target=FBgn0000360.1 1 51 +
Chr1	stalkie_big_nohaplotig	CDS	156124792	156125478	.	-	0	Parent=FBgn0000360.1.mrna2;Target=FBgn0000360.1 52 738 +
Chr1	stalkie_big_nohaplotig	CDS	156125555	156125605	.	-	0	Parent=FBgn0000360.1.mrna2;Target=FBgn0000360.1 1 51 +
Chr1	gffcl	locus	156128389	156129320	.	-	.	ID=RLOC_00012829;geneIDs=FBgn0000359.1.path2;transcripts=FBgn0000359.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	156128389	156129320	.	-	.	ID=FBgn0000359.1.mrna2;geneID=FBgn0000359.1.path2;Name=FBgn0000359.1;Dir=sensecoverage=100.0;identity=99.9;matches=845;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012829
Chr1	stalkie_big_nohaplotig	exon	156128389	156129144	99	-	.	Parent=FBgn0000359.1.mrna2;Target=FBgn0000359.1 91 846 +
Chr1	stalkie_big_nohaplotig	exon	156129231	156129320	100	-	.	Parent=FBgn0000359.1.mrna2;Target=FBgn0000359.1 1 90 +
Chr1	stalkie_big_nohaplotig	CDS	156128389	156129144	.	-	0	Parent=FBgn0000359.1.mrna2;Target=FBgn0000359.1 91 846 +
Chr1	stalkie_big_nohaplotig	CDS	156129231	156129320	.	-	0	Parent=FBgn0000359.1.mrna2;Target=FBgn0000359.1 1 90 +
Chr1	gffcl	locus	156132434	156133868	.	-	.	ID=RLOC_00012830;geneIDs=ORF888.path1;transcripts=ORF888.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156132434	156133868	.	-	.	ID=ORF888.mrna1;geneID=ORF888.path1;Name=ORF888;Dir=sensecoverage=100.0;identity=99.3;matches=1353;mismatches=9;indels=0;unknowns=0;locus=RLOC_00012830
Chr1	stalkie_big_nohaplotig	exon	156132434	156133654	99	-	.	Parent=ORF888.mrna1;Target=ORF888 142 1362 +
Chr1	stalkie_big_nohaplotig	exon	156133728	156133868	100	-	.	Parent=ORF888.mrna1;Target=ORF888 1 141 +
Chr1	stalkie_big_nohaplotig	CDS	156132434	156133654	.	-	0	Parent=ORF888.mrna1;Target=ORF888 142 1362 +
Chr1	stalkie_big_nohaplotig	CDS	156133728	156133868	.	-	0	Parent=ORF888.mrna1;Target=ORF888 1 141 +
Chr1	gffcl	locus	156139852	156141402	.	-	.	ID=RLOC_00012831;geneIDs=comp162425_c1_seq1.path1;transcripts=comp162425_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156139852	156141402	.	-	.	ID=comp162425_c1_seq1.mrna1;geneID=comp162425_c1_seq1.path1;Name=comp162425_c1_seq1;Dir=sensecoverage=97.0;identity=99.3;matches=1096;mismatches=7;indels=1;unknowns=0;locus=RLOC_00012831
Chr1	stalkie_big_nohaplotig	exon	156139852	156140100	100	-	.	Parent=comp162425_c1_seq1.mrna1;Target=comp162425_c1_seq1 874 1122 +
Chr1	stalkie_big_nohaplotig	exon	156140158	156140324	100	-	.	Parent=comp162425_c1_seq1.mrna1;Target=comp162425_c1_seq1 707 873 +
Chr1	stalkie_big_nohaplotig	exon	156140382	156140550	100	-	.	Parent=comp162425_c1_seq1.mrna1;Target=comp162425_c1_seq1 538 706 +
Chr1	stalkie_big_nohaplotig	exon	156140611	156140769	96	-	.	Parent=comp162425_c1_seq1.mrna1;Target=comp162425_c1_seq1 378 537 +
Chr1	stalkie_big_nohaplotig	exon	156140825	156140919	100	-	.	Parent=comp162425_c1_seq1.mrna1;Target=comp162425_c1_seq1 283 377 +
Chr1	stalkie_big_nohaplotig	exon	156141066	156141203	99	-	.	Parent=comp162425_c1_seq1.mrna1;Target=comp162425_c1_seq1 145 282 +
Chr1	stalkie_big_nohaplotig	exon	156141277	156141402	98	-	.	Parent=comp162425_c1_seq1.mrna1;Target=comp162425_c1_seq1 19 144 +
Chr1	stalkie_big_nohaplotig	CDS	156140851	156140919	.	-	0	Parent=comp162425_c1_seq1.mrna1;Target=comp162425_c1_seq1 283 351 +
Chr1	stalkie_big_nohaplotig	CDS	156141066	156141122	.	-	0	Parent=comp162425_c1_seq1.mrna1;Target=comp162425_c1_seq1 226 282 +
Chr1	gffcl	locus	156142086	156143662	.	+	.	ID=RLOC_00012832;geneIDs=comp162425_c1_seq1.path2;transcripts=comp162425_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	156142086	156143662	.	+	.	ID=comp162425_c1_seq1.mrna2;geneID=comp162425_c1_seq1.path2;Name=comp162425_c1_seq1;Dir=sensecoverage=99.1;identity=98.6;matches=1114;mismatches=13;indels=3;unknowns=0;locus=RLOC_00012832
Chr1	stalkie_big_nohaplotig	exon	156142086	156142223	95	+	.	Parent=comp162425_c1_seq1.mrna2;Target=comp162425_c1_seq1 9 144 +
Chr1	stalkie_big_nohaplotig	exon	156142297	156142434	99	+	.	Parent=comp162425_c1_seq1.mrna2;Target=comp162425_c1_seq1 145 282 +
Chr1	stalkie_big_nohaplotig	exon	156142581	156142675	100	+	.	Parent=comp162425_c1_seq1.mrna2;Target=comp162425_c1_seq1 283 377 +
Chr1	stalkie_big_nohaplotig	exon	156142731	156142889	96	+	.	Parent=comp162425_c1_seq1.mrna2;Target=comp162425_c1_seq1 378 537 +
Chr1	stalkie_big_nohaplotig	exon	156142950	156143118	100	+	.	Parent=comp162425_c1_seq1.mrna2;Target=comp162425_c1_seq1 538 706 +
Chr1	stalkie_big_nohaplotig	exon	156143176	156143342	100	+	.	Parent=comp162425_c1_seq1.mrna2;Target=comp162425_c1_seq1 707 873 +
Chr1	stalkie_big_nohaplotig	exon	156143400	156143662	98	+	.	Parent=comp162425_c1_seq1.mrna2;Target=comp162425_c1_seq1 874 1136 +
Chr1	stalkie_big_nohaplotig	CDS	156142378	156142434	.	+	0	Parent=comp162425_c1_seq1.mrna2;Target=comp162425_c1_seq1 226 282 +
Chr1	stalkie_big_nohaplotig	CDS	156142581	156142649	.	+	0	Parent=comp162425_c1_seq1.mrna2;Target=comp162425_c1_seq1 283 351 +
Chr1	gffcl	locus	156144432	156145914	.	-	.	ID=RLOC_00012833;geneIDs=FBgn0014464.1.path1;transcripts=FBgn0014464.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156144432	156145914	.	-	.	ID=FBgn0014464.1.mrna1;geneID=FBgn0014464.1.path1;Name=FBgn0014464.1;Dir=sensecoverage=100.0;identity=99.9;matches=851;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012833
Chr1	stalkie_big_nohaplotig	exon	156144432	156144948	100	-	.	Parent=FBgn0014464.1.mrna1;Target=FBgn0014464.1 336 852 +
Chr1	stalkie_big_nohaplotig	exon	156145014	156145093	100	-	.	Parent=FBgn0014464.1.mrna1;Target=FBgn0014464.1 256 335 +
Chr1	stalkie_big_nohaplotig	exon	156145546	156145737	99	-	.	Parent=FBgn0014464.1.mrna1;Target=FBgn0014464.1 64 255 +
Chr1	stalkie_big_nohaplotig	exon	156145852	156145914	100	-	.	Parent=FBgn0014464.1.mrna1;Target=FBgn0014464.1 1 63 +
Chr1	stalkie_big_nohaplotig	CDS	156144432	156144948	.	-	1	Parent=FBgn0014464.1.mrna1;Target=FBgn0014464.1 336 852 +
Chr1	stalkie_big_nohaplotig	CDS	156145014	156145093	.	-	0	Parent=FBgn0014464.1.mrna1;Target=FBgn0014464.1 256 335 +
Chr1	stalkie_big_nohaplotig	CDS	156145546	156145737	.	-	0	Parent=FBgn0014464.1.mrna1;Target=FBgn0014464.1 64 255 +
Chr1	stalkie_big_nohaplotig	CDS	156145852	156145914	.	-	0	Parent=FBgn0014464.1.mrna1;Target=FBgn0014464.1 1 63 +
Chr1	gffcl	locus	156150090	156150901	.	-	.	ID=RLOC_00012834;geneIDs=FBgn0030041.1.path1;transcripts=FBgn0030041.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156150090	156150901	.	-	.	ID=FBgn0030041.1.mrna1;geneID=FBgn0030041.1.path1;Name=FBgn0030041.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=808;mismatches=4;indels=1;unknowns=0;Target=FBgn0030041.1 813 1 .;CDS_Target=FBgn0030041.1 140 3 .;locus=RLOC_00012834
Chr1	stalkie_big_nohaplotig	exon	156150090	156150901	99	-	.	Parent=FBgn0030041.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156150763	156150899	.	-	0	Parent=FBgn0030041.1.mrna1
Chr1	gffcl	locus	156154209	156154976	.	+	.	ID=RLOC_00012835;geneIDs=FBgn0028581.1.path2;transcripts=FBgn0028581.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	156154209	156154976	.	+	.	ID=FBgn0028581.1.mrna2;geneID=FBgn0028581.1.path2;Name=FBgn0028581.1;Dir=sensecoverage=98.9;identity=99.2;matches=600;mismatches=5;indels=0;unknowns=0;locus=RLOC_00012835
Chr1	stalkie_big_nohaplotig	exon	156154209	156154303	97	+	.	Parent=FBgn0028581.1.mrna2;Target=FBgn0028581.1 1 95 +
Chr1	stalkie_big_nohaplotig	exon	156154391	156154843	99	+	.	Parent=FBgn0028581.1.mrna2;Target=FBgn0028581.1 96 548 +
Chr1	stalkie_big_nohaplotig	exon	156154920	156154976	100	+	.	Parent=FBgn0028581.1.mrna2;Target=FBgn0028581.1 549 605 +
Chr1	stalkie_big_nohaplotig	CDS	156154209	156154303	.	+	0	Parent=FBgn0028581.1.mrna2;Target=FBgn0028581.1 1 95 +
Chr1	stalkie_big_nohaplotig	CDS	156154391	156154843	.	+	1	Parent=FBgn0028581.1.mrna2;Target=FBgn0028581.1 96 548 +
Chr1	stalkie_big_nohaplotig	CDS	156154920	156154974	.	+	1	Parent=FBgn0028581.1.mrna2;Target=FBgn0028581.1 549 603 +
Chr1	gffcl	locus	156158539	156160679	.	-	.	ID=RLOC_00012836;geneIDs=FBgn0260748.1.path2;transcripts=FBgn0260748.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	156158539	156160679	.	-	.	ID=FBgn0260748.1.mrna2;geneID=FBgn0260748.1.path2;Name=FBgn0260748.1;Dir=sensecoverage=16.5;identity=99.9;matches=701;mismatches=0;indels=1;unknowns=0;locus=RLOC_00012836
Chr1	stalkie_big_nohaplotig	exon	156158539	156158672	99	-	.	Parent=FBgn0260748.1.mrna2;Target=FBgn0260748.1 4120 4254 +
Chr1	stalkie_big_nohaplotig	exon	156160055	156160187	100	-	.	Parent=FBgn0260748.1.mrna2;Target=FBgn0260748.1 3987 4119 +
Chr1	stalkie_big_nohaplotig	exon	156160246	156160679	100	-	.	Parent=FBgn0260748.1.mrna2;Target=FBgn0260748.1 3553 3986 +
Chr1	stalkie_big_nohaplotig	CDS	156158539	156158672	.	-	0	Parent=FBgn0260748.1.mrna2;Target=FBgn0260748.1 4120 4254 +
Chr1	stalkie_big_nohaplotig	CDS	156160055	156160187	.	-	1	Parent=FBgn0260748.1.mrna2;Target=FBgn0260748.1 3987 4119 +
Chr1	stalkie_big_nohaplotig	CDS	156160246	156160679	.	-	0	Parent=FBgn0260748.1.mrna2;Target=FBgn0260748.1 3553 3986 +
Chr1	gffcl	locus	156159367	156159840	.	+	.	ID=RLOC_00012837;geneIDs=FBgn0040291.1.path1;transcripts=FBgn0040291.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156159367	156159840	.	+	.	ID=FBgn0040291.1.mrna1;geneID=FBgn0040291.1.path1;Name=FBgn0040291.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=473;mismatches=1;indels=0;unknowns=0;Target=FBgn0040291.1 474 1 .;locus=RLOC_00012837
Chr1	stalkie_big_nohaplotig	exon	156159367	156159840	99	+	.	Parent=FBgn0040291.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156159367	156159840	.	+	0	Parent=FBgn0040291.1.mrna1
Chr1	gffcl	locus	156195142	156195716	.	-	.	ID=RLOC_00012838;geneIDs=FBgn0020765.2.path1;transcripts=FBgn0020765.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156195142	156195716	.	-	.	ID=FBgn0020765.2.mrna1;geneID=FBgn0020765.2.path1;Name=FBgn0020765.2;Dir=sensecoverage=100.0;identity=98.2;matches=392;mismatches=6;indels=1;unknowns=0;locus=RLOC_00012838
Chr1	stalkie_big_nohaplotig	exon	156195142	156195325	98	-	.	Parent=FBgn0020765.2.mrna1;Target=FBgn0020765.2 216 399 +
Chr1	stalkie_big_nohaplotig	exon	156195437	156195552	99	-	.	Parent=FBgn0020765.2.mrna1;Target=FBgn0020765.2 100 215 +
Chr1	stalkie_big_nohaplotig	exon	156195619	156195716	95	-	.	Parent=FBgn0020765.2.mrna1;Target=FBgn0020765.2 1 99 +
Chr1	stalkie_big_nohaplotig	CDS	156195142	156195325	.	-	1	Parent=FBgn0020765.2.mrna1;Target=FBgn0020765.2 216 399 +
Chr1	stalkie_big_nohaplotig	CDS	156195437	156195552	.	-	0	Parent=FBgn0020765.2.mrna1;Target=FBgn0020765.2 100 215 +
Chr1	stalkie_big_nohaplotig	CDS	156195619	156195627	.	-	0	Parent=FBgn0020765.2.mrna1;Target=FBgn0020765.2 91 99 +
Chr1	gffcl	locus	156201716	156206133	.	+	.	ID=RLOC_00012839;geneIDs=FBgn0020642.2.path1;transcripts=FBgn0020642.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156201716	156206133	.	+	.	ID=FBgn0020642.2.mrna1;geneID=FBgn0020642.2.path1;Name=FBgn0020642.2;Dir=sensecoverage=100.0;identity=98.1;matches=371;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012839
Chr1	stalkie_big_nohaplotig	exon	156201716	156201906	98	+	.	Parent=FBgn0020642.2.mrna1;Target=FBgn0020642.2 1 191 +
Chr1	stalkie_big_nohaplotig	exon	156205947	156206133	97	+	.	Parent=FBgn0020642.2.mrna1;Target=FBgn0020642.2 192 378 +
Chr1	stalkie_big_nohaplotig	CDS	156201716	156201906	.	+	0	Parent=FBgn0020642.2.mrna1;Target=FBgn0020642.2 1 191 +
Chr1	stalkie_big_nohaplotig	CDS	156205947	156206133	.	+	1	Parent=FBgn0020642.2.mrna1;Target=FBgn0020642.2 192 378 +
Chr1	gffcl	locus	156214183	156214599	.	+	.	ID=RLOC_00012840;geneIDs=FBgn0020642.3.path1;transcripts=FBgn0020642.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156214183	156214599	.	+	.	ID=FBgn0020642.3.mrna1;geneID=FBgn0020642.3.path1;Name=FBgn0020642.3;Dir=sensecoverage=93.0;identity=99.2;matches=354;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012840
Chr1	stalkie_big_nohaplotig	exon	156214183	156214337	98	+	.	Parent=FBgn0020642.3.mrna1;Target=FBgn0020642.3 28 182 +
Chr1	stalkie_big_nohaplotig	exon	156214398	156214599	99	+	.	Parent=FBgn0020642.3.mrna1;Target=FBgn0020642.3 183 384 +
Chr1	stalkie_big_nohaplotig	CDS	156214183	156214337	.	+	0	Parent=FBgn0020642.3.mrna1;Target=FBgn0020642.3 28 182 +
Chr1	stalkie_big_nohaplotig	CDS	156214398	156214599	.	+	1	Parent=FBgn0020642.3.mrna1;Target=FBgn0020642.3 183 384 +
Chr1	gffcl	locus	156216220	156216701	.	-	.	ID=RLOC_00012841;geneIDs=FBgn0020643.1.path1;transcripts=FBgn0020643.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156216220	156216701	.	-	.	ID=FBgn0020643.1.mrna1;geneID=FBgn0020643.1.path1;Name=FBgn0020643.1;Dir=sensecoverage=100.0;identity=100.0;matches=309;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012841
Chr1	stalkie_big_nohaplotig	exon	156216220	156216406	100	-	.	Parent=FBgn0020643.1.mrna1;Target=FBgn0020643.1 123 309 +
Chr1	stalkie_big_nohaplotig	exon	156216580	156216701	100	-	.	Parent=FBgn0020643.1.mrna1;Target=FBgn0020643.1 1 122 +
Chr1	stalkie_big_nohaplotig	CDS	156216220	156216406	.	-	1	Parent=FBgn0020643.1.mrna1;Target=FBgn0020643.1 123 309 +
Chr1	stalkie_big_nohaplotig	CDS	156216580	156216701	.	-	0	Parent=FBgn0020643.1.mrna1;Target=FBgn0020643.1 1 122 +
Chr1	gffcl	locus	156236294	156236809	.	-	.	ID=RLOC_00012843;geneIDs=FBgn0020765.1.path1;transcripts=FBgn0020765.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156236294	156236809	.	-	.	ID=FBgn0020765.1.mrna1;geneID=FBgn0020765.1.path1;Name=FBgn0020765.1;Dir=sensecoverage=100.0;identity=100.0;matches=393;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012843
Chr1	stalkie_big_nohaplotig	exon	156236294	156236477	100	-	.	Parent=FBgn0020765.1.mrna1;Target=FBgn0020765.1 210 393 +
Chr1	stalkie_big_nohaplotig	exon	156236535	156236653	100	-	.	Parent=FBgn0020765.1.mrna1;Target=FBgn0020765.1 91 209 +
Chr1	stalkie_big_nohaplotig	exon	156236720	156236809	100	-	.	Parent=FBgn0020765.1.mrna1;Target=FBgn0020765.1 1 90 +
Chr1	stalkie_big_nohaplotig	CDS	156236294	156236477	.	-	1	Parent=FBgn0020765.1.mrna1;Target=FBgn0020765.1 210 393 +
Chr1	stalkie_big_nohaplotig	CDS	156236535	156236653	.	-	0	Parent=FBgn0020765.1.mrna1;Target=FBgn0020765.1 91 209 +
Chr1	stalkie_big_nohaplotig	CDS	156236720	156236809	.	-	0	Parent=FBgn0020765.1.mrna1;Target=FBgn0020765.1 1 90 +
Chr1	gffcl	locus	156252890	156253667	.	-	.	ID=RLOC_00012844;geneIDs=comp150717_c1_seq1.path2;transcripts=comp150717_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	156252890	156253667	.	-	.	ID=comp150717_c1_seq1.mrna2;geneID=comp150717_c1_seq1.path2;Name=comp150717_c1_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=571;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012844
Chr1	stalkie_big_nohaplotig	exon	156252890	156253129	100	-	.	Parent=comp150717_c1_seq1.mrna2;Target=comp150717_c1_seq1 334 573 +
Chr1	stalkie_big_nohaplotig	exon	156253230	156253375	98	-	.	Parent=comp150717_c1_seq1.mrna2;Target=comp150717_c1_seq1 188 333 +
Chr1	stalkie_big_nohaplotig	exon	156253481	156253667	100	-	.	Parent=comp150717_c1_seq1.mrna2;Target=comp150717_c1_seq1 1 187 +
Chr1	stalkie_big_nohaplotig	CDS	156252955	156253129	.	-	1	Parent=comp150717_c1_seq1.mrna2;Target=comp150717_c1_seq1 334 508 +
Chr1	stalkie_big_nohaplotig	CDS	156253230	156253375	.	-	0	Parent=comp150717_c1_seq1.mrna2;Target=comp150717_c1_seq1 188 333 +
Chr1	stalkie_big_nohaplotig	CDS	156253481	156253498	.	-	0	Parent=comp150717_c1_seq1.mrna2;Target=comp150717_c1_seq1 170 187 +
Chr1	gffcl	locus	156256296	156256491	.	+	.	ID=RLOC_00012845;geneIDs=FBgn0020642.1.path1;transcripts=FBgn0020642.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156256296	156256491	.	+	.	ID=FBgn0020642.1.mrna1;geneID=FBgn0020642.1.path1;Name=FBgn0020642.1;Dir=indeterminatecoverage=53.1;identity=100.0;matches=196;mismatches=0;indels=0;unknowns=0;Target=FBgn0020642.1 369 174 .;CDS_Target=FBgn0020642.1 369 175 .;locus=RLOC_00012845
Chr1	stalkie_big_nohaplotig	exon	156256296	156256491	100	+	.	Parent=FBgn0020642.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156256297	156256491	.	+	0	Parent=FBgn0020642.1.mrna1
Chr1	gffcl	locus	156266719	156266874	.	-	.	ID=RLOC_00012846;geneIDs=comp158584_c0_seq1.path1;transcripts=comp158584_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156266719	156266874	.	-	.	ID=comp158584_c0_seq1.mrna1;geneID=comp158584_c0_seq1.path1;Name=comp158584_c0_seq1;Dir=indeterminatecoverage=10.8;identity=99.4;matches=155;mismatches=1;indels=0;unknowns=0;Target=comp158584_c0_seq1 157 2 .;locus=RLOC_00012846
Chr1	stalkie_big_nohaplotig	exon	156266719	156266874	99	-	.	Parent=comp158584_c0_seq1.mrna1
Chr1	gffcl	locus	156276356	156660816	.	-	.	ID=RLOC_00012847;geneIDs=FBgn0030961.1.path1;transcripts=FBgn0030961.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156276356	156660816	.	-	.	ID=FBgn0030961.1.mrna1;geneID=FBgn0030961.1.path1;Name=FBgn0030961.1;Dir=sensecoverage=100.0;identity=99.3;matches=2908;mismatches=20;indels=0;unknowns=0;locus=RLOC_00012847
Chr1	stalkie_big_nohaplotig	exon	156276356	156276502	100	-	.	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 2782 2928 +
Chr1	stalkie_big_nohaplotig	exon	156276565	156276741	98	-	.	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 2605 2781 +
Chr1	stalkie_big_nohaplotig	exon	156277328	156277475	100	-	.	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 2457 2604 +
Chr1	stalkie_big_nohaplotig	exon	156277538	156277591	100	-	.	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 2403 2456 +
Chr1	stalkie_big_nohaplotig	exon	156277657	156277934	99	-	.	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 2125 2402 +
Chr1	stalkie_big_nohaplotig	exon	156278622	156278804	99	-	.	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 1942 2124 +
Chr1	stalkie_big_nohaplotig	exon	156278871	156278930	100	-	.	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 1882 1941 +
Chr1	stalkie_big_nohaplotig	exon	156279147	156279327	98	-	.	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 1701 1881 +
Chr1	stalkie_big_nohaplotig	exon	156279396	156279708	97	-	.	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 1388 1700 +
Chr1	stalkie_big_nohaplotig	exon	156657711	156657726	100	-	.	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 1372 1387 +
Chr1	stalkie_big_nohaplotig	exon	156657813	156657884	100	-	.	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 1300 1371 +
Chr1	stalkie_big_nohaplotig	exon	156657949	156658160	99	-	.	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 1088 1299 +
Chr1	stalkie_big_nohaplotig	exon	156658219	156658353	100	-	.	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 953 1087 +
Chr1	stalkie_big_nohaplotig	exon	156658416	156659292	99	-	.	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 76 952 +
Chr1	stalkie_big_nohaplotig	exon	156660669	156660723	98	-	.	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 21 75 +
Chr1	stalkie_big_nohaplotig	exon	156660797	156660816	100	-	.	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 1 20 +
Chr1	stalkie_big_nohaplotig	CDS	156276356	156276502	.	-	0	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 2782 2928 +
Chr1	stalkie_big_nohaplotig	CDS	156276565	156276741	.	-	0	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 2605 2781 +
Chr1	stalkie_big_nohaplotig	CDS	156277328	156277475	.	-	1	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 2457 2604 +
Chr1	stalkie_big_nohaplotig	CDS	156277538	156277591	.	-	1	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 2403 2456 +
Chr1	stalkie_big_nohaplotig	CDS	156277657	156277934	.	-	0	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 2125 2402 +
Chr1	stalkie_big_nohaplotig	CDS	156278622	156278804	.	-	0	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 1942 2124 +
Chr1	stalkie_big_nohaplotig	CDS	156278871	156278930	.	-	0	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 1882 1941 +
Chr1	stalkie_big_nohaplotig	CDS	156279147	156279327	.	-	1	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 1701 1881 +
Chr1	stalkie_big_nohaplotig	CDS	156279396	156279708	.	-	2	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 1388 1700 +
Chr1	stalkie_big_nohaplotig	CDS	156657711	156657726	.	-	0	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 1372 1387 +
Chr1	stalkie_big_nohaplotig	CDS	156657813	156657884	.	-	0	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 1300 1371 +
Chr1	stalkie_big_nohaplotig	CDS	156657949	156658160	.	-	2	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 1088 1299 +
Chr1	stalkie_big_nohaplotig	CDS	156658219	156658353	.	-	2	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 953 1087 +
Chr1	stalkie_big_nohaplotig	CDS	156658416	156659292	.	-	0	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 76 952 +
Chr1	stalkie_big_nohaplotig	CDS	156660669	156660723	.	-	1	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 21 75 +
Chr1	stalkie_big_nohaplotig	CDS	156660797	156660816	.	-	0	Parent=FBgn0030961.1.mrna1;Target=FBgn0030961.1 1 20 +
Chr1	gffcl	locus	156283985	156289614	.	-	.	ID=RLOC_00012848;geneIDs=comp150926_c0_seq1.path1;transcripts=comp150926_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156283985	156289614	.	-	.	ID=comp150926_c0_seq1.mrna1;geneID=comp150926_c0_seq1.path1;Name=comp150926_c0_seq1;Dir=antisensecoverage=100.0;identity=95.6;matches=408;mismatches=14;indels=5;unknowns=0;Target=comp150926_c0_seq1 309 422 .;locus=RLOC_00012848
Chr1	stalkie_big_nohaplotig	exon	156283985	156284128	92	-	.	Parent=comp150926_c0_seq1.mrna1;Target=comp150926_c0_seq1 1 140 -
Chr1	stalkie_big_nohaplotig	exon	156284250	156284405	96	-	.	Parent=comp150926_c0_seq1.mrna1;Target=comp150926_c0_seq1 141 297 -
Chr1	stalkie_big_nohaplotig	exon	156289489	156289614	98	-	.	Parent=comp150926_c0_seq1.mrna1;Target=comp150926_c0_seq1 298 423 -
Chr1	stalkie_big_nohaplotig	CDS	156289500	156289613	.	-	0	Parent=comp150926_c0_seq1.mrna1
Chr1	gffcl	locus	156284659	156285381	.	-	.	ID=RLOC_00012849;geneIDs=comp155087_c0_seq1.path1;transcripts=comp155087_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156284659	156285381	.	-	.	ID=comp155087_c0_seq1.mrna1;geneID=comp155087_c0_seq1.path1;Name=comp155087_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=703;mismatches=20;indels=0;unknowns=0;Target=comp155087_c0_seq1 723 1 .;CDS_Target=comp155087_c0_seq1 110 3 .;locus=RLOC_00012849
Chr1	stalkie_big_nohaplotig	exon	156284659	156285381	97	-	.	Parent=comp155087_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156285272	156285379	.	-	0	Parent=comp155087_c0_seq1.mrna1
Chr1	gffcl	locus	156303475	156306554	.	-	.	ID=RLOC_00012850;geneIDs=FBgn0016034.4.path1;transcripts=FBgn0016034.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156303475	156306554	.	-	.	ID=FBgn0016034.4.mrna1;geneID=FBgn0016034.4.path1;Name=FBgn0016034.4;Dir=sensecoverage=100.0;identity=99.5;matches=1633;mismatches=8;indels=0;unknowns=0;locus=RLOC_00012850
Chr1	stalkie_big_nohaplotig	exon	156303475	156304200	99	-	.	Parent=FBgn0016034.4.mrna1;Target=FBgn0016034.4 916 1641 +
Chr1	stalkie_big_nohaplotig	exon	156304439	156304818	99	-	.	Parent=FBgn0016034.4.mrna1;Target=FBgn0016034.4 536 915 +
Chr1	stalkie_big_nohaplotig	exon	156304931	156305080	98	-	.	Parent=FBgn0016034.4.mrna1;Target=FBgn0016034.4 386 535 +
Chr1	stalkie_big_nohaplotig	exon	156305138	156305339	99	-	.	Parent=FBgn0016034.4.mrna1;Target=FBgn0016034.4 184 385 +
Chr1	stalkie_big_nohaplotig	exon	156306372	156306554	100	-	.	Parent=FBgn0016034.4.mrna1;Target=FBgn0016034.4 1 183 +
Chr1	stalkie_big_nohaplotig	CDS	156303475	156304200	.	-	0	Parent=FBgn0016034.4.mrna1;Target=FBgn0016034.4 916 1641 +
Chr1	stalkie_big_nohaplotig	CDS	156304439	156304818	.	-	2	Parent=FBgn0016034.4.mrna1;Target=FBgn0016034.4 536 915 +
Chr1	stalkie_big_nohaplotig	CDS	156304931	156305080	.	-	2	Parent=FBgn0016034.4.mrna1;Target=FBgn0016034.4 386 535 +
Chr1	stalkie_big_nohaplotig	CDS	156305138	156305339	.	-	0	Parent=FBgn0016034.4.mrna1;Target=FBgn0016034.4 184 385 +
Chr1	stalkie_big_nohaplotig	CDS	156306372	156306554	.	-	0	Parent=FBgn0016034.4.mrna1;Target=FBgn0016034.4 1 183 +
Chr1	gffcl	locus	156310731	156313959	.	+	.	ID=RLOC_00012851;geneIDs=comp157635_c0_seq1.path1;transcripts=comp157635_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156310731	156313959	.	+	.	ID=comp157635_c0_seq1.mrna1;geneID=comp157635_c0_seq1.path1;Name=comp157635_c0_seq1;Dir=sensecoverage=99.9;identity=94.0;matches=1418;mismatches=59;indels=31;unknowns=0;Target=comp157635_c0_seq1 335 505 +;locus=RLOC_00012851
Chr1	stalkie_big_nohaplotig	exon	156310731	156311390	95	+	.	Parent=comp157635_c0_seq1.mrna1;Target=comp157635_c0_seq1 1 667 +
Chr1	stalkie_big_nohaplotig	exon	156311795	156311908	97	+	.	Parent=comp157635_c0_seq1.mrna1;Target=comp157635_c0_seq1 668 781 +
Chr1	stalkie_big_nohaplotig	exon	156311966	156312065	93	+	.	Parent=comp157635_c0_seq1.mrna1;Target=comp157635_c0_seq1 782 881 +
Chr1	stalkie_big_nohaplotig	exon	156312135	156312429	94	+	.	Parent=comp157635_c0_seq1.mrna1;Target=comp157635_c0_seq1 882 1171 +
Chr1	stalkie_big_nohaplotig	exon	156313647	156313959	89	+	.	Parent=comp157635_c0_seq1.mrna1;Target=comp157635_c0_seq1 1172 1503 +
Chr1	stalkie_big_nohaplotig	CDS	156311058	156311228	.	+	0	Parent=comp157635_c0_seq1.mrna1
Chr1	gffcl	locus	156327581	156328346	.	+	.	ID=RLOC_00012852;geneIDs=comp150698_c0_seq1.path1;transcripts=comp150698_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156327581	156328346	.	+	.	ID=comp150698_c0_seq1.mrna1;geneID=comp150698_c0_seq1.path1;Name=comp150698_c0_seq1;Dir=indeterminatecoverage=66.2;identity=99.2;matches=761;mismatches=5;indels=1;unknowns=0;Target=comp150698_c0_seq1 769 3 .;CDS_Target=comp150698_c0_seq1 479 294 .;locus=RLOC_00012852
Chr1	stalkie_big_nohaplotig	exon	156327581	156328346	99	+	.	Parent=comp150698_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156327871	156328056	.	+	0	Parent=comp150698_c0_seq1.mrna1
Chr1	gffcl	locus	156334544	156335564	.	-	.	ID=RLOC_00012853;geneIDs=comp158847_c0_seq1.path1;transcripts=comp158847_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156334544	156335564	.	-	.	ID=comp158847_c0_seq1.mrna1;geneID=comp158847_c0_seq1.path1;Name=comp158847_c0_seq1;Dir=indeterminatecoverage=98.4;identity=98.8;matches=1010;mismatches=11;indels=1;unknowns=0;Target=comp158847_c0_seq1 1025 4 .;CDS_Target=comp158847_c0_seq1 724 125 .;locus=RLOC_00012853
Chr1	stalkie_big_nohaplotig	exon	156334544	156335564	98	-	.	Parent=comp158847_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156334844	156335443	.	-	0	Parent=comp158847_c0_seq1.mrna1
Chr1	gffcl	locus	156341828	156343771	.	+	.	ID=RLOC_00012854;geneIDs=comp162805_c0_seq1.path1;transcripts=comp162805_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156341828	156343771	.	+	.	ID=comp162805_c0_seq1.mrna1;geneID=comp162805_c0_seq1.path1;Name=comp162805_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.2;matches=1787;mismatches=157;indels=16;unknowns=0;Target=comp162805_c0_seq1 1960 1 .;CDS_Target=comp162805_c0_seq1 121 2 .;locus=RLOC_00012854
Chr1	stalkie_big_nohaplotig	exon	156341828	156343771	91	+	.	Parent=comp162805_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156341829	156341948	.	+	0	Parent=comp162805_c0_seq1.mrna1
Chr1	gffcl	locus	156411610	156412138	.	-	.	ID=RLOC_00012856;geneIDs=comp143072_c0_seq1.path1;transcripts=comp143072_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156411610	156412138	.	-	.	ID=comp143072_c0_seq1.mrna1;geneID=comp143072_c0_seq1.path1;Name=comp143072_c0_seq1;Dir=indeterminatecoverage=94.5;identity=99.4;matches=526;mismatches=3;indels=0;unknowns=0;Target=comp143072_c0_seq1 556 28 .;CDS_Target=comp143072_c0_seq1 182 30 .;locus=RLOC_00012856
Chr1	stalkie_big_nohaplotig	exon	156411610	156412138	99	-	.	Parent=comp143072_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156411984	156412136	.	-	0	Parent=comp143072_c0_seq1.mrna1
Chr1	gffcl	locus	156414332	156419690	.	-	.	ID=RLOC_00012857;geneIDs=comp159334_c0_seq1.path1;transcripts=comp159334_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156414332	156419690	.	-	.	ID=comp159334_c0_seq1.mrna1;geneID=comp159334_c0_seq1.path1;Name=comp159334_c0_seq1;Dir=antisensecoverage=81.1;identity=91.7;matches=803;mismatches=53;indels=20;unknowns=0;locus=RLOC_00012857
Chr1	stalkie_big_nohaplotig	exon	156414332	156414338	100	-	.	Parent=comp159334_c0_seq1.mrna1;Target=comp159334_c0_seq1 190 196 -
Chr1	stalkie_big_nohaplotig	exon	156418276	156418285	100	-	.	Parent=comp159334_c0_seq1.mrna1;Target=comp159334_c0_seq1 197 206 -
Chr1	stalkie_big_nohaplotig	exon	156418784	156419334	90	-	.	Parent=comp159334_c0_seq1.mrna1;Target=comp159334_c0_seq1 214 768 -
Chr1	stalkie_big_nohaplotig	exon	156419395	156419690	94	-	.	Parent=comp159334_c0_seq1.mrna1;Target=comp159334_c0_seq1 769 1064 -
Chr1	stalkie_big_nohaplotig	CDS	156414334	156414338	.	-	0	Parent=comp159334_c0_seq1.mrna1;Target=comp159334_c0_seq1 192 196 .
Chr1	stalkie_big_nohaplotig	CDS	156418276	156418285	.	-	1	Parent=comp159334_c0_seq1.mrna1;Target=comp159334_c0_seq1 197 206 .
Chr1	stalkie_big_nohaplotig	CDS	156418784	156418908	.	-	0	Parent=comp159334_c0_seq1.mrna1;Target=comp159334_c0_seq1 214 341 .
Chr1	gffcl	locus	156423207	156424487	.	-	.	ID=RLOC_00012858;geneIDs=comp154902_c0_seq1.path1;transcripts=comp154902_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156423207	156424487	.	-	.	ID=comp154902_c0_seq1.mrna1;geneID=comp154902_c0_seq1.path1;Name=comp154902_c0_seq1;Dir=sensecoverage=97.5;identity=98.2;matches=721;mismatches=10;indels=3;unknowns=0;locus=RLOC_00012858
Chr1	stalkie_big_nohaplotig	exon	156423207	156423406	99	-	.	Parent=comp154902_c0_seq1.mrna1;Target=comp154902_c0_seq1 535 734 +
Chr1	stalkie_big_nohaplotig	exon	156423471	156423587	99	-	.	Parent=comp154902_c0_seq1.mrna1;Target=comp154902_c0_seq1 418 534 +
Chr1	stalkie_big_nohaplotig	exon	156424074	156424487	97	-	.	Parent=comp154902_c0_seq1.mrna1;Target=comp154902_c0_seq1 1 417 +
Chr1	stalkie_big_nohaplotig	CDS	156423275	156423406	.	-	0	Parent=comp154902_c0_seq1.mrna1;Target=comp154902_c0_seq1 535 666 +
Chr1	stalkie_big_nohaplotig	CDS	156423471	156423587	.	-	0	Parent=comp154902_c0_seq1.mrna1;Target=comp154902_c0_seq1 418 534 +
Chr1	stalkie_big_nohaplotig	CDS	156424074	156424121	.	-	0	Parent=comp154902_c0_seq1.mrna1;Target=comp154902_c0_seq1 370 417 +
Chr1	gffcl	locus	156451815	156452301	.	+	.	ID=RLOC_00012859;geneIDs=comp986548_c0_seq1.path1;transcripts=comp986548_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156451815	156452301	.	+	.	ID=comp986548_c0_seq1.mrna1;geneID=comp986548_c0_seq1.path1;Name=comp986548_c0_seq1;Dir=indeterminatecoverage=98.4;identity=98.8;matches=481;mismatches=6;indels=0;unknowns=0;Target=comp986548_c0_seq1 495 9 .;CDS_Target=comp986548_c0_seq1 453 343 .;locus=RLOC_00012859
Chr1	stalkie_big_nohaplotig	exon	156451815	156452301	98	+	.	Parent=comp986548_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156452149	156452259	.	+	0	Parent=comp986548_c0_seq1.mrna1
Chr1	gffcl	locus	156498052	156499775	.	-	.	ID=RLOC_00012860;geneIDs=comp146473_c0_seq1.path1;transcripts=comp146473_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156498052	156499775	.	-	.	ID=comp146473_c0_seq1.mrna1;geneID=comp146473_c0_seq1.path1;Name=comp146473_c0_seq1;Dir=sensecoverage=100.0;identity=99.0;matches=577;mismatches=4;indels=2;unknowns=0;locus=RLOC_00012860
Chr1	stalkie_big_nohaplotig	exon	156498052	156498265	98	-	.	Parent=comp146473_c0_seq1.mrna1;Target=comp146473_c0_seq1 370 583 +
Chr1	stalkie_big_nohaplotig	exon	156498323	156498433	100	-	.	Parent=comp146473_c0_seq1.mrna1;Target=comp146473_c0_seq1 259 369 +
Chr1	stalkie_big_nohaplotig	exon	156499520	156499775	98	-	.	Parent=comp146473_c0_seq1.mrna1;Target=comp146473_c0_seq1 1 258 +
Chr1	stalkie_big_nohaplotig	CDS	156498143	156498265	.	-	0	Parent=comp146473_c0_seq1.mrna1;Target=comp146473_c0_seq1 370 492 +
Chr1	stalkie_big_nohaplotig	CDS	156498323	156498433	.	-	0	Parent=comp146473_c0_seq1.mrna1;Target=comp146473_c0_seq1 259 369 +
Chr1	stalkie_big_nohaplotig	CDS	156499520	156499582	.	-	0	Parent=comp146473_c0_seq1.mrna1;Target=comp146473_c0_seq1 196 258 +
Chr1	gffcl	locus	156538225	156539037	.	-	.	ID=RLOC_00012861;geneIDs=comp118701_c0_seq1.path1;transcripts=comp118701_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156538225	156539037	.	-	.	ID=comp118701_c0_seq1.mrna1;geneID=comp118701_c0_seq1.path1;Name=comp118701_c0_seq1;Dir=indeterminatecoverage=96.2;identity=98.3;matches=596;mismatches=10;indels=0;unknowns=0;Target=comp118701_c0_seq1 465 337 .;locus=RLOC_00012861
Chr1	stalkie_big_nohaplotig	exon	156538225	156538723	98	-	.	Parent=comp118701_c0_seq1.mrna1;Target=comp118701_c0_seq1 659 161 .
Chr1	stalkie_big_nohaplotig	exon	156538931	156539037	95	-	.	Parent=comp118701_c0_seq1.mrna1;Target=comp118701_c0_seq1 131 25 .
Chr1	stalkie_big_nohaplotig	CDS	156538419	156538547	.	-	0	Parent=comp118701_c0_seq1.mrna1
Chr1	gffcl	locus	156579571	156580133	.	+	.	ID=RLOC_00012862;geneIDs=comp155257_c1_seq1.path1;transcripts=comp155257_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156579571	156580133	.	+	.	ID=comp155257_c1_seq1.mrna1;geneID=comp155257_c1_seq1.path1;Name=comp155257_c1_seq1;Dir=indeterminatecoverage=100.0;identity=84.2;matches=479;mismatches=84;indels=6;unknowns=0;Target=comp155257_c1_seq1 569 1 .;CDS_Target=comp155257_c1_seq1 450 1 .;locus=RLOC_00012862
Chr1	stalkie_big_nohaplotig	exon	156579571	156580133	84	+	.	Parent=comp155257_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156579571	156580014	.	+	0	Parent=comp155257_c1_seq1.mrna1
Chr1	gffcl	locus	156580434	156581592	.	-	.	ID=RLOC_00012863;geneIDs=FBgn0085486.2.path1;transcripts=FBgn0085486.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156580434	156581592	.	-	.	ID=FBgn0085486.2.mrna1;geneID=FBgn0085486.2.path1;Name=FBgn0085486.2;Dir=sensecoverage=100.0;identity=100.0;matches=897;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012863
Chr1	stalkie_big_nohaplotig	exon	156580434	156580532	100	-	.	Parent=FBgn0085486.2.mrna1;Target=FBgn0085486.2 799 897 +
Chr1	stalkie_big_nohaplotig	exon	156580620	156580706	100	-	.	Parent=FBgn0085486.2.mrna1;Target=FBgn0085486.2 712 798 +
Chr1	stalkie_big_nohaplotig	exon	156580762	156580863	100	-	.	Parent=FBgn0085486.2.mrna1;Target=FBgn0085486.2 610 711 +
Chr1	stalkie_big_nohaplotig	exon	156580921	156581427	100	-	.	Parent=FBgn0085486.2.mrna1;Target=FBgn0085486.2 103 609 +
Chr1	stalkie_big_nohaplotig	exon	156581491	156581592	100	-	.	Parent=FBgn0085486.2.mrna1;Target=FBgn0085486.2 1 102 +
Chr1	stalkie_big_nohaplotig	CDS	156580434	156580532	.	-	0	Parent=FBgn0085486.2.mrna1;Target=FBgn0085486.2 799 897 +
Chr1	stalkie_big_nohaplotig	CDS	156580620	156580706	.	-	0	Parent=FBgn0085486.2.mrna1;Target=FBgn0085486.2 712 798 +
Chr1	stalkie_big_nohaplotig	CDS	156580762	156580863	.	-	0	Parent=FBgn0085486.2.mrna1;Target=FBgn0085486.2 610 711 +
Chr1	stalkie_big_nohaplotig	CDS	156580921	156581427	.	-	0	Parent=FBgn0085486.2.mrna1;Target=FBgn0085486.2 103 609 +
Chr1	stalkie_big_nohaplotig	CDS	156581491	156581592	.	-	0	Parent=FBgn0085486.2.mrna1;Target=FBgn0085486.2 1 102 +
Chr1	gffcl	locus	156583639	156583941	.	-	.	ID=RLOC_00012864;geneIDs=comp146430_c0_seq1.path1;transcripts=comp146430_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156583639	156583941	.	-	.	ID=comp146430_c0_seq1.mrna1;geneID=comp146430_c0_seq1.path1;Name=comp146430_c0_seq1;Dir=indeterminatecoverage=93.8;identity=99.3;matches=301;mismatches=2;indels=0;unknowns=0;Target=comp146430_c0_seq1 303 1 .;CDS_Target=comp146430_c0_seq1 233 147 .;locus=RLOC_00012864
Chr1	stalkie_big_nohaplotig	exon	156583639	156583941	99	-	.	Parent=comp146430_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156583709	156583795	.	-	0	Parent=comp146430_c0_seq1.mrna1
Chr1	gffcl	locus	156585244	156585696	.	-	.	ID=RLOC_00012865;geneIDs=comp150691_c0_seq1.path1;transcripts=comp150691_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156585244	156585696	.	-	.	ID=comp150691_c0_seq1.mrna1;geneID=comp150691_c0_seq1.path1;Name=comp150691_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=451;mismatches=2;indels=0;unknowns=0;Target=comp150691_c0_seq1 453 1 .;CDS_Target=comp150691_c0_seq1 287 165 .;locus=RLOC_00012865
Chr1	stalkie_big_nohaplotig	exon	156585244	156585696	99	-	.	Parent=comp150691_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156585410	156585532	.	-	0	Parent=comp150691_c0_seq1.mrna1
Chr1	gffcl	locus	156586086	156586621	.	+	.	ID=RLOC_00012866;geneIDs=comp157750_c0_seq1.path1;transcripts=comp157750_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156586086	156586621	.	+	.	ID=comp157750_c0_seq1.mrna1;geneID=comp157750_c0_seq1.path1;Name=comp157750_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=531;mismatches=5;indels=0;unknowns=0;Target=comp157750_c0_seq1 536 1 .;CDS_Target=comp157750_c0_seq1 277 248 .;locus=RLOC_00012866
Chr1	stalkie_big_nohaplotig	exon	156586086	156586621	99	+	.	Parent=comp157750_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156586333	156586362	.	+	0	Parent=comp157750_c0_seq1.mrna1
Chr1	gffcl	locus	156587447	156587953	.	-	.	ID=RLOC_00012867;geneIDs=comp152705_c0_seq1.path1;transcripts=comp152705_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156587447	156587953	.	-	.	ID=comp152705_c0_seq1.mrna1;geneID=comp152705_c0_seq1.path1;Name=comp152705_c0_seq1;Dir=indeterminatecoverage=98.4;identity=98.4;matches=500;mismatches=7;indels=1;unknowns=0;Target=comp152705_c0_seq1 516 9 .;CDS_Target=comp152705_c0_seq1 64 11 .;locus=RLOC_00012867
Chr1	stalkie_big_nohaplotig	exon	156587447	156587953	98	-	.	Parent=comp152705_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156587899	156587951	.	-	0	Parent=comp152705_c0_seq1.mrna1
Chr1	gffcl	locus	156588697	156589281	.	-	.	ID=RLOC_00012868;geneIDs=comp161436_c0_seq1.path1;transcripts=comp161436_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156588697	156589281	.	-	.	ID=comp161436_c0_seq1.mrna1;geneID=comp161436_c0_seq1.path1;Name=comp161436_c0_seq1;Dir=indeterminatecoverage=90.6;identity=98.5;matches=577;mismatches=8;indels=1;unknowns=0;Target=comp161436_c0_seq1 592 7 .;CDS_Target=comp161436_c0_seq1 308 174 .;locus=RLOC_00012868
Chr1	stalkie_big_nohaplotig	exon	156588697	156589281	98	-	.	Parent=comp161436_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156588980	156589114	.	-	0	Parent=comp161436_c0_seq1.mrna1
Chr1	gffcl	locus	156598234	156600863	.	+	.	ID=RLOC_00012870;geneIDs=ORF755.path1;transcripts=ORF755.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156598234	156600863	.	+	.	ID=ORF755.mrna1;geneID=ORF755.path1;Name=ORF755;Dir=sensecoverage=100.0;identity=99.4;matches=1449;mismatches=9;indels=0;unknowns=0;locus=RLOC_00012870
Chr1	stalkie_big_nohaplotig	exon	156598234	156598348	100	+	.	Parent=ORF755.mrna1;Target=ORF755 1 115 +
Chr1	stalkie_big_nohaplotig	exon	156598415	156598615	98	+	.	Parent=ORF755.mrna1;Target=ORF755 116 316 +
Chr1	stalkie_big_nohaplotig	exon	156599662	156600339	99	+	.	Parent=ORF755.mrna1;Target=ORF755 317 994 +
Chr1	stalkie_big_nohaplotig	exon	156600400	156600863	99	+	.	Parent=ORF755.mrna1;Target=ORF755 995 1458 +
Chr1	stalkie_big_nohaplotig	CDS	156598234	156598348	.	+	0	Parent=ORF755.mrna1;Target=ORF755 1 115 +
Chr1	stalkie_big_nohaplotig	CDS	156598415	156598615	.	+	2	Parent=ORF755.mrna1;Target=ORF755 116 316 +
Chr1	stalkie_big_nohaplotig	CDS	156599662	156600339	.	+	2	Parent=ORF755.mrna1;Target=ORF755 317 994 +
Chr1	stalkie_big_nohaplotig	CDS	156600400	156600863	.	+	2	Parent=ORF755.mrna1;Target=ORF755 995 1458 +
Chr1	gffcl	locus	156603660	156604133	.	+	.	ID=RLOC_00012871;geneIDs=comp153305_c0_seq1.path1;transcripts=comp153305_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156603660	156604133	.	+	.	ID=comp153305_c0_seq1.mrna1;geneID=comp153305_c0_seq1.path1;Name=comp153305_c0_seq1;Dir=antisensecoverage=99.5;identity=99.5;matches=419;mismatches=2;indels=0;unknowns=0;Target=comp153305_c0_seq1 87 263 .;locus=RLOC_00012871
Chr1	stalkie_big_nohaplotig	exon	156603660	156603818	99	+	.	Parent=comp153305_c0_seq1.mrna1;Target=comp153305_c0_seq1 265 423 -
Chr1	stalkie_big_nohaplotig	exon	156603872	156604133	99	+	.	Parent=comp153305_c0_seq1.mrna1;Target=comp153305_c0_seq1 3 264 -
Chr1	stalkie_big_nohaplotig	CDS	156603873	156604049	.	+	0	Parent=comp153305_c0_seq1.mrna1
Chr1	gffcl	locus	156629486	156630019	.	-	.	ID=RLOC_00012872;geneIDs=comp146703_c0_seq1.path1;transcripts=comp146703_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156629486	156630019	.	-	.	ID=comp146703_c0_seq1.mrna1;geneID=comp146703_c0_seq1.path1;Name=comp146703_c0_seq1;Dir=sensecoverage=94.8;identity=99.6;matches=470;mismatches=2;indels=0;unknowns=0;Target=comp146703_c0_seq1 189 374 +;locus=RLOC_00012872
Chr1	stalkie_big_nohaplotig	exon	156629486	156629790	100	-	.	Parent=comp146703_c0_seq1.mrna1;Target=comp146703_c0_seq1 175 479 +
Chr1	stalkie_big_nohaplotig	exon	156629853	156630019	98	-	.	Parent=comp146703_c0_seq1.mrna1;Target=comp146703_c0_seq1 8 174 +
Chr1	stalkie_big_nohaplotig	CDS	156629591	156629776	.	-	0	Parent=comp146703_c0_seq1.mrna1
Chr1	gffcl	locus	156664395	156725855	.	-	.	ID=RLOC_00012873;geneIDs=FBgn0004462.1.path1;transcripts=FBgn0004462.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156664395	156725855	.	-	.	ID=FBgn0004462.1.mrna1;geneID=FBgn0004462.1.path1;Name=FBgn0004462.1;Dir=sensecoverage=100.0;identity=99.8;matches=1428;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012873
Chr1	stalkie_big_nohaplotig	exon	156664395	156664499	99	-	.	Parent=FBgn0004462.1.mrna1;Target=FBgn0004462.1 1327 1431 +
Chr1	stalkie_big_nohaplotig	exon	156664563	156664847	99	-	.	Parent=FBgn0004462.1.mrna1;Target=FBgn0004462.1 1042 1326 +
Chr1	stalkie_big_nohaplotig	exon	156709456	156709544	100	-	.	Parent=FBgn0004462.1.mrna1;Target=FBgn0004462.1 953 1041 +
Chr1	stalkie_big_nohaplotig	exon	156712977	156713135	100	-	.	Parent=FBgn0004462.1.mrna1;Target=FBgn0004462.1 794 952 +
Chr1	stalkie_big_nohaplotig	exon	156714702	156714800	100	-	.	Parent=FBgn0004462.1.mrna1;Target=FBgn0004462.1 695 793 +
Chr1	stalkie_big_nohaplotig	exon	156714877	156715000	100	-	.	Parent=FBgn0004462.1.mrna1;Target=FBgn0004462.1 571 694 +
Chr1	stalkie_big_nohaplotig	exon	156715064	156715301	100	-	.	Parent=FBgn0004462.1.mrna1;Target=FBgn0004462.1 333 570 +
Chr1	stalkie_big_nohaplotig	exon	156715376	156715479	100	-	.	Parent=FBgn0004462.1.mrna1;Target=FBgn0004462.1 229 332 +
Chr1	stalkie_big_nohaplotig	exon	156725628	156725855	99	-	.	Parent=FBgn0004462.1.mrna1;Target=FBgn0004462.1 1 228 +
Chr1	stalkie_big_nohaplotig	CDS	156664395	156664499	.	-	0	Parent=FBgn0004462.1.mrna1;Target=FBgn0004462.1 1327 1431 +
Chr1	stalkie_big_nohaplotig	CDS	156664563	156664847	.	-	0	Parent=FBgn0004462.1.mrna1;Target=FBgn0004462.1 1042 1326 +
Chr1	stalkie_big_nohaplotig	CDS	156709456	156709544	.	-	2	Parent=FBgn0004462.1.mrna1;Target=FBgn0004462.1 953 1041 +
Chr1	stalkie_big_nohaplotig	CDS	156712977	156713135	.	-	2	Parent=FBgn0004462.1.mrna1;Target=FBgn0004462.1 794 952 +
Chr1	stalkie_big_nohaplotig	CDS	156714702	156714800	.	-	2	Parent=FBgn0004462.1.mrna1;Target=FBgn0004462.1 695 793 +
Chr1	stalkie_big_nohaplotig	CDS	156714877	156715000	.	-	0	Parent=FBgn0004462.1.mrna1;Target=FBgn0004462.1 571 694 +
Chr1	stalkie_big_nohaplotig	CDS	156715064	156715301	.	-	1	Parent=FBgn0004462.1.mrna1;Target=FBgn0004462.1 333 570 +
Chr1	stalkie_big_nohaplotig	CDS	156715376	156715479	.	-	0	Parent=FBgn0004462.1.mrna1;Target=FBgn0004462.1 229 332 +
Chr1	stalkie_big_nohaplotig	CDS	156725628	156725855	.	-	0	Parent=FBgn0004462.1.mrna1;Target=FBgn0004462.1 1 228 +
Chr1	gffcl	locus	156709765	156710085	.	-	.	ID=RLOC_00012874;geneIDs=comp141187_c0_seq1.path1;transcripts=comp141187_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156709765	156710085	.	-	.	ID=comp141187_c0_seq1.mrna1;geneID=comp141187_c0_seq1.path1;Name=comp141187_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=321;mismatches=0;indels=0;unknowns=0;Target=comp141187_c0_seq1 321 1 .;CDS_Target=comp141187_c0_seq1 46 2 .;locus=RLOC_00012874
Chr1	stalkie_big_nohaplotig	exon	156709765	156710085	100	-	.	Parent=comp141187_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156710040	156710084	.	-	0	Parent=comp141187_c0_seq1.mrna1
Chr1	gffcl	locus	156711982	156712704	.	-	.	ID=RLOC_00012875;geneIDs=FBgn0030960.1.path1;transcripts=FBgn0030960.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156711982	156712704	.	-	.	ID=FBgn0030960.1.mrna1;geneID=FBgn0030960.1.path1;Name=FBgn0030960.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=723;mismatches=0;indels=0;unknowns=0;Target=FBgn0030960.1 723 1 .;locus=RLOC_00012875
Chr1	stalkie_big_nohaplotig	exon	156711982	156712704	100	-	.	Parent=FBgn0030960.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156711982	156712704	.	-	0	Parent=FBgn0030960.1.mrna1
Chr1	gffcl	locus	156728895	156730320	.	+	.	ID=RLOC_00012876;geneIDs=FBgn0030956.1.path1;transcripts=FBgn0030956.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156728895	156730320	.	+	.	ID=FBgn0030956.1.mrna1;geneID=FBgn0030956.1.path1;Name=FBgn0030956.1;Dir=sensecoverage=100.0;identity=99.8;matches=1224;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012876
Chr1	stalkie_big_nohaplotig	exon	156728895	156728968	100	+	.	Parent=FBgn0030956.1.mrna1;Target=FBgn0030956.1 1 74 +
Chr1	stalkie_big_nohaplotig	exon	156729046	156729449	99	+	.	Parent=FBgn0030956.1.mrna1;Target=FBgn0030956.1 75 478 +
Chr1	stalkie_big_nohaplotig	exon	156729509	156730178	99	+	.	Parent=FBgn0030956.1.mrna1;Target=FBgn0030956.1 479 1148 +
Chr1	stalkie_big_nohaplotig	exon	156730242	156730320	100	+	.	Parent=FBgn0030956.1.mrna1;Target=FBgn0030956.1 1149 1227 +
Chr1	stalkie_big_nohaplotig	CDS	156728895	156728968	.	+	0	Parent=FBgn0030956.1.mrna1;Target=FBgn0030956.1 1 74 +
Chr1	stalkie_big_nohaplotig	CDS	156729046	156729449	.	+	1	Parent=FBgn0030956.1.mrna1;Target=FBgn0030956.1 75 478 +
Chr1	stalkie_big_nohaplotig	CDS	156729509	156730178	.	+	2	Parent=FBgn0030956.1.mrna1;Target=FBgn0030956.1 479 1148 +
Chr1	stalkie_big_nohaplotig	CDS	156730242	156730320	.	+	1	Parent=FBgn0030956.1.mrna1;Target=FBgn0030956.1 1149 1227 +
Chr1	gffcl	locus	156731234	156733094	.	-	.	ID=RLOC_00012877;geneIDs=FBgn0030955.1.path2;transcripts=FBgn0030955.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	156731234	156733094	.	-	.	ID=FBgn0030955.1.mrna2;geneID=FBgn0030955.1.path2;Name=FBgn0030955.1;Dir=sensecoverage=86.4;identity=100.0;matches=438;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012877
Chr1	stalkie_big_nohaplotig	exon	156731234	156731347	100	-	.	Parent=FBgn0030955.1.mrna2;Target=FBgn0030955.1 394 507 +
Chr1	stalkie_big_nohaplotig	exon	156732695	156732935	100	-	.	Parent=FBgn0030955.1.mrna2;Target=FBgn0030955.1 153 393 +
Chr1	stalkie_big_nohaplotig	exon	156733012	156733094	100	-	.	Parent=FBgn0030955.1.mrna2;Target=FBgn0030955.1 70 152 +
Chr1	stalkie_big_nohaplotig	CDS	156731234	156731347	.	-	0	Parent=FBgn0030955.1.mrna2;Target=FBgn0030955.1 394 507 +
Chr1	stalkie_big_nohaplotig	CDS	156732695	156732935	.	-	1	Parent=FBgn0030955.1.mrna2;Target=FBgn0030955.1 153 393 +
Chr1	stalkie_big_nohaplotig	CDS	156733012	156733094	.	-	0	Parent=FBgn0030955.1.mrna2;Target=FBgn0030955.1 70 152 +
Chr1	gffcl	locus	156765760	156768989	.	+	.	ID=RLOC_00012878;geneIDs=FBgn0032436.1.path1;transcripts=FBgn0032436.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156765760	156768989	.	+	.	ID=FBgn0032436.1.mrna1;geneID=FBgn0032436.1.path1;Name=FBgn0032436.1;Dir=sensecoverage=100.0;identity=98.7;matches=1079;mismatches=14;indels=0;unknowns=5;locus=RLOC_00012878
Chr1	stalkie_big_nohaplotig	exon	156765760	156765837	97	+	.	Parent=FBgn0032436.1.mrna1;Target=FBgn0032436.1 1 78 +
Chr1	stalkie_big_nohaplotig	exon	156767418	156767657	99	+	.	Parent=FBgn0032436.1.mrna1;Target=FBgn0032436.1 79 318 +
Chr1	stalkie_big_nohaplotig	exon	156767719	156767889	97	+	.	Parent=FBgn0032436.1.mrna1;Target=FBgn0032436.1 319 489 +
Chr1	stalkie_big_nohaplotig	exon	156767972	156768098	98	+	.	Parent=FBgn0032436.1.mrna1;Target=FBgn0032436.1 490 616 +
Chr1	stalkie_big_nohaplotig	exon	156768449	156768594	99	+	.	Parent=FBgn0032436.1.mrna1;Target=FBgn0032436.1 617 762 +
Chr1	stalkie_big_nohaplotig	exon	156768654	156768989	99	+	.	Parent=FBgn0032436.1.mrna1;Target=FBgn0032436.1 763 1098 +
Chr1	stalkie_big_nohaplotig	CDS	156765760	156765837	.	+	0	Parent=FBgn0032436.1.mrna1;Target=FBgn0032436.1 1 78 +
Chr1	stalkie_big_nohaplotig	CDS	156767418	156767657	.	+	0	Parent=FBgn0032436.1.mrna1;Target=FBgn0032436.1 79 318 +
Chr1	stalkie_big_nohaplotig	CDS	156767719	156767889	.	+	0	Parent=FBgn0032436.1.mrna1;Target=FBgn0032436.1 319 489 +
Chr1	stalkie_big_nohaplotig	CDS	156767972	156768098	.	+	0	Parent=FBgn0032436.1.mrna1;Target=FBgn0032436.1 490 616 +
Chr1	stalkie_big_nohaplotig	CDS	156768449	156768594	.	+	2	Parent=FBgn0032436.1.mrna1;Target=FBgn0032436.1 617 762 +
Chr1	stalkie_big_nohaplotig	CDS	156768654	156768989	.	+	0	Parent=FBgn0032436.1.mrna1;Target=FBgn0032436.1 763 1098 +
Chr1	gffcl	locus	156775534	156775602	.	+	.	ID=RLOC_00012879;geneIDs=FBgn0030955.1.path1;transcripts=FBgn0030955.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156775534	156775602	.	+	.	ID=FBgn0030955.1.mrna1;geneID=FBgn0030955.1.path1;Name=FBgn0030955.1;Dir=indeterminatecoverage=13.6;identity=98.6;matches=68;mismatches=1;indels=0;unknowns=0;Target=FBgn0030955.1 69 1 .;locus=RLOC_00012879
Chr1	stalkie_big_nohaplotig	exon	156775534	156775602	98	+	.	Parent=FBgn0030955.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156775534	156775602	.	+	0	Parent=FBgn0030955.1.mrna1
Chr1	gffcl	locus	156834669	156835050	.	+	.	ID=RLOC_00012880;geneIDs=comp151476_c0_seq1.path1;transcripts=comp151476_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156834669	156835050	.	+	.	ID=comp151476_c0_seq1.mrna1;geneID=comp151476_c0_seq1.path1;Name=comp151476_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=381;mismatches=1;indels=0;unknowns=0;Target=comp151476_c0_seq1 382 1 .;CDS_Target=comp151476_c0_seq1 322 239 .;locus=RLOC_00012880
Chr1	stalkie_big_nohaplotig	exon	156834669	156835050	99	+	.	Parent=comp151476_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156834907	156834990	.	+	0	Parent=comp151476_c0_seq1.mrna1
Chr1	gffcl	locus	156835116	156835569	.	+	.	ID=RLOC_00012881;geneIDs=comp106559_c0_seq1.path1;transcripts=comp106559_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156835116	156835569	.	+	.	ID=comp106559_c0_seq1.mrna1;geneID=comp106559_c0_seq1.path1;Name=comp106559_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=454;mismatches=0;indels=0;unknowns=0;Target=comp106559_c0_seq1 454 1 .;CDS_Target=comp106559_c0_seq1 145 95 .;locus=RLOC_00012881
Chr1	stalkie_big_nohaplotig	exon	156835116	156835569	100	+	.	Parent=comp106559_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156835210	156835260	.	+	0	Parent=comp106559_c0_seq1.mrna1
Chr1	gffcl	locus	156837273	156844359	.	-	.	ID=RLOC_00012882;geneIDs=FBgn0031119.1.path1;transcripts=FBgn0031119.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156837273	156844359	.	-	.	ID=FBgn0031119.1.mrna1;geneID=FBgn0031119.1.path1;Name=FBgn0031119.1;Dir=sensecoverage=100.0;identity=99.6;matches=1996;mismatches=2;indels=6;unknowns=0;locus=RLOC_00012882
Chr1	stalkie_big_nohaplotig	exon	156837273	156837739	100	-	.	Parent=FBgn0031119.1.mrna1;Target=FBgn0031119.1 1538 2004 +
Chr1	stalkie_big_nohaplotig	exon	156837799	156838173	97	-	.	Parent=FBgn0031119.1.mrna1;Target=FBgn0031119.1 1157 1537 +
Chr1	stalkie_big_nohaplotig	exon	156838244	156839099	100	-	.	Parent=FBgn0031119.1.mrna1;Target=FBgn0031119.1 301 1156 +
Chr1	stalkie_big_nohaplotig	exon	156844060	156844359	100	-	.	Parent=FBgn0031119.1.mrna1;Target=FBgn0031119.1 1 300 +
Chr1	stalkie_big_nohaplotig	CDS	156837273	156837739	.	-	2	Parent=FBgn0031119.1.mrna1;Target=FBgn0031119.1 1538 2004 +
Chr1	stalkie_big_nohaplotig	CDS	156837799	156838173	.	-	2	Parent=FBgn0031119.1.mrna1;Target=FBgn0031119.1 1157 1537 +
Chr1	stalkie_big_nohaplotig	CDS	156838244	156839099	.	-	0	Parent=FBgn0031119.1.mrna1;Target=FBgn0031119.1 301 1156 +
Chr1	stalkie_big_nohaplotig	CDS	156844060	156844359	.	-	0	Parent=FBgn0031119.1.mrna1;Target=FBgn0031119.1 1 300 +
Chr1	gffcl	locus	156846297	156848317	.	+	.	ID=RLOC_00012883;geneIDs=FBgn0030122.1.path1;transcripts=FBgn0030122.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156846297	156848317	.	+	.	ID=FBgn0030122.1.mrna1;geneID=FBgn0030122.1.path1;Name=FBgn0030122.1;Dir=sensecoverage=100.0;identity=99.9;matches=1496;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012883
Chr1	stalkie_big_nohaplotig	exon	156846297	156846476	100	+	.	Parent=FBgn0030122.1.mrna1;Target=FBgn0030122.1 1 180 +
Chr1	stalkie_big_nohaplotig	exon	156846532	156846854	100	+	.	Parent=FBgn0030122.1.mrna1;Target=FBgn0030122.1 181 503 +
Chr1	stalkie_big_nohaplotig	exon	156846909	156847035	99	+	.	Parent=FBgn0030122.1.mrna1;Target=FBgn0030122.1 504 630 +
Chr1	stalkie_big_nohaplotig	exon	156847112	156847263	100	+	.	Parent=FBgn0030122.1.mrna1;Target=FBgn0030122.1 631 782 +
Chr1	stalkie_big_nohaplotig	exon	156847326	156847699	100	+	.	Parent=FBgn0030122.1.mrna1;Target=FBgn0030122.1 783 1156 +
Chr1	stalkie_big_nohaplotig	exon	156847977	156848317	100	+	.	Parent=FBgn0030122.1.mrna1;Target=FBgn0030122.1 1157 1497 +
Chr1	stalkie_big_nohaplotig	CDS	156846297	156846476	.	+	0	Parent=FBgn0030122.1.mrna1;Target=FBgn0030122.1 1 180 +
Chr1	stalkie_big_nohaplotig	CDS	156846532	156846854	.	+	0	Parent=FBgn0030122.1.mrna1;Target=FBgn0030122.1 181 503 +
Chr1	stalkie_big_nohaplotig	CDS	156846909	156847035	.	+	1	Parent=FBgn0030122.1.mrna1;Target=FBgn0030122.1 504 630 +
Chr1	stalkie_big_nohaplotig	CDS	156847112	156847263	.	+	0	Parent=FBgn0030122.1.mrna1;Target=FBgn0030122.1 631 782 +
Chr1	stalkie_big_nohaplotig	CDS	156847326	156847699	.	+	1	Parent=FBgn0030122.1.mrna1;Target=FBgn0030122.1 783 1156 +
Chr1	stalkie_big_nohaplotig	CDS	156847977	156848317	.	+	2	Parent=FBgn0030122.1.mrna1;Target=FBgn0030122.1 1157 1497 +
Chr1	gffcl	locus	156848821	156908807	.	-	.	ID=RLOC_00012884;geneIDs=FBgn0040236.1.path1;transcripts=FBgn0040236.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156848821	156908807	.	-	.	ID=FBgn0040236.1.mrna1;geneID=FBgn0040236.1.path1;Name=FBgn0040236.1;Dir=sensecoverage=100.0;identity=99.5;matches=5236;mismatches=24;indels=0;unknowns=2;locus=RLOC_00012884
Chr1	stalkie_big_nohaplotig	exon	156848821	156848960	98	-	.	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 5123 5262 +
Chr1	stalkie_big_nohaplotig	exon	156849700	156849802	100	-	.	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 5020 5122 +
Chr1	stalkie_big_nohaplotig	exon	156849859	156849993	100	-	.	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 4885 5019 +
Chr1	stalkie_big_nohaplotig	exon	156850052	156850364	98	-	.	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 4572 4884 +
Chr1	stalkie_big_nohaplotig	exon	156850430	156851103	99	-	.	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 3898 4571 +
Chr1	stalkie_big_nohaplotig	exon	156851170	156851374	100	-	.	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 3693 3897 +
Chr1	stalkie_big_nohaplotig	exon	156851493	156851617	100	-	.	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 3568 3692 +
Chr1	stalkie_big_nohaplotig	exon	156851804	156851942	98	-	.	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 3429 3567 +
Chr1	stalkie_big_nohaplotig	exon	156852001	156852640	99	-	.	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 2789 3428 +
Chr1	stalkie_big_nohaplotig	exon	156889345	156891444	99	-	.	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 689 2788 +
Chr1	stalkie_big_nohaplotig	exon	156891512	156891873	100	-	.	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 327 688 +
Chr1	stalkie_big_nohaplotig	exon	156891935	156892112	100	-	.	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 149 326 +
Chr1	stalkie_big_nohaplotig	exon	156908660	156908807	100	-	.	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 1 148 +
Chr1	stalkie_big_nohaplotig	CDS	156848821	156848960	.	-	2	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 5123 5262 +
Chr1	stalkie_big_nohaplotig	CDS	156849700	156849802	.	-	0	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 5020 5122 +
Chr1	stalkie_big_nohaplotig	CDS	156849859	156849993	.	-	0	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 4885 5019 +
Chr1	stalkie_big_nohaplotig	CDS	156850052	156850364	.	-	1	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 4572 4884 +
Chr1	stalkie_big_nohaplotig	CDS	156850430	156851103	.	-	0	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 3898 4571 +
Chr1	stalkie_big_nohaplotig	CDS	156851170	156851374	.	-	1	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 3693 3897 +
Chr1	stalkie_big_nohaplotig	CDS	156851493	156851617	.	-	0	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 3568 3692 +
Chr1	stalkie_big_nohaplotig	CDS	156851804	156851942	.	-	1	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 3429 3567 +
Chr1	stalkie_big_nohaplotig	CDS	156852001	156852640	.	-	2	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 2789 3428 +
Chr1	stalkie_big_nohaplotig	CDS	156889345	156891444	.	-	2	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 689 2788 +
Chr1	stalkie_big_nohaplotig	CDS	156891512	156891873	.	-	1	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 327 688 +
Chr1	stalkie_big_nohaplotig	CDS	156891935	156892112	.	-	2	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 149 326 +
Chr1	stalkie_big_nohaplotig	CDS	156908660	156908807	.	-	0	Parent=FBgn0040236.1.mrna1;Target=FBgn0040236.1 1 148 +
Chr1	gffcl	locus	156884085	156884406	.	-	.	ID=RLOC_00012885;geneIDs=comp126252_c0_seq1.path1;transcripts=comp126252_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156884085	156884406	.	-	.	ID=comp126252_c0_seq1.mrna1;geneID=comp126252_c0_seq1.path1;Name=comp126252_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=322;mismatches=0;indels=0;unknowns=0;Target=comp126252_c0_seq1 322 1 .;CDS_Target=comp126252_c0_seq1 187 146 .;locus=RLOC_00012885
Chr1	stalkie_big_nohaplotig	exon	156884085	156884406	100	-	.	Parent=comp126252_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156884220	156884261	.	-	0	Parent=comp126252_c0_seq1.mrna1
Chr1	gffcl	locus	156907854	156908592	.	+	.	ID=RLOC_00012887;geneIDs=comp152994_c0_seq1.path1;transcripts=comp152994_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156907854	156908592	.	+	.	ID=comp152994_c0_seq1.mrna1;geneID=comp152994_c0_seq1.path1;Name=comp152994_c0_seq1;Dir=sensecoverage=100.0;identity=98.5;matches=672;mismatches=8;indels=2;unknowns=0;Target=comp152994_c0_seq1 3 161 +;locus=RLOC_00012887
Chr1	stalkie_big_nohaplotig	exon	156907854	156908216	97	+	.	Parent=comp152994_c0_seq1.mrna1;Target=comp152994_c0_seq1 1 363 +
Chr1	stalkie_big_nohaplotig	exon	156908274	156908592	99	+	.	Parent=comp152994_c0_seq1.mrna1;Target=comp152994_c0_seq1 364 680 +
Chr1	stalkie_big_nohaplotig	CDS	156907856	156908014	.	+	0	Parent=comp152994_c0_seq1.mrna1
Chr1	gffcl	locus	156911140	156911929	.	-	.	ID=RLOC_00012888;geneIDs=FBgn0040235.1.path1;transcripts=FBgn0040235.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156911140	156911929	.	-	.	ID=FBgn0040235.1.mrna1;geneID=FBgn0040235.1.path1;Name=FBgn0040235.1;Dir=sensecoverage=100.0;identity=100.0;matches=720;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012888
Chr1	stalkie_big_nohaplotig	exon	156911140	156911722	100	-	.	Parent=FBgn0040235.1.mrna1;Target=FBgn0040235.1 138 720 +
Chr1	stalkie_big_nohaplotig	exon	156911793	156911929	100	-	.	Parent=FBgn0040235.1.mrna1;Target=FBgn0040235.1 1 137 +
Chr1	stalkie_big_nohaplotig	CDS	156911140	156911722	.	-	1	Parent=FBgn0040235.1.mrna1;Target=FBgn0040235.1 138 720 +
Chr1	stalkie_big_nohaplotig	CDS	156911793	156911929	.	-	0	Parent=FBgn0040235.1.mrna1;Target=FBgn0040235.1 1 137 +
Chr1	gffcl	locus	156941126	156968818	.	-	.	ID=RLOC_00012889;geneIDs=FBgn0002576.1.path1;transcripts=FBgn0002576.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156941126	156968818	.	-	.	ID=FBgn0002576.1.mrna1;geneID=FBgn0002576.1.path1;Name=FBgn0002576.1;Dir=sensecoverage=100.0;identity=99.6;matches=1984;mismatches=8;indels=0;unknowns=0;locus=RLOC_00012889
Chr1	stalkie_big_nohaplotig	exon	156941126	156942051	99	-	.	Parent=FBgn0002576.1.mrna1;Target=FBgn0002576.1 1067 1992 +
Chr1	stalkie_big_nohaplotig	exon	156951110	156951310	99	-	.	Parent=FBgn0002576.1.mrna1;Target=FBgn0002576.1 866 1066 +
Chr1	stalkie_big_nohaplotig	exon	156955003	156955116	100	-	.	Parent=FBgn0002576.1.mrna1;Target=FBgn0002576.1 752 865 +
Chr1	stalkie_big_nohaplotig	exon	156963417	156963656	100	-	.	Parent=FBgn0002576.1.mrna1;Target=FBgn0002576.1 512 751 +
Chr1	stalkie_big_nohaplotig	exon	156968308	156968818	100	-	.	Parent=FBgn0002576.1.mrna1;Target=FBgn0002576.1 1 511 +
Chr1	stalkie_big_nohaplotig	CDS	156941126	156942051	.	-	2	Parent=FBgn0002576.1.mrna1;Target=FBgn0002576.1 1067 1992 +
Chr1	stalkie_big_nohaplotig	CDS	156951110	156951310	.	-	2	Parent=FBgn0002576.1.mrna1;Target=FBgn0002576.1 866 1066 +
Chr1	stalkie_big_nohaplotig	CDS	156955003	156955116	.	-	2	Parent=FBgn0002576.1.mrna1;Target=FBgn0002576.1 752 865 +
Chr1	stalkie_big_nohaplotig	CDS	156963417	156963656	.	-	2	Parent=FBgn0002576.1.mrna1;Target=FBgn0002576.1 512 751 +
Chr1	stalkie_big_nohaplotig	CDS	156968308	156968818	.	-	0	Parent=FBgn0002576.1.mrna1;Target=FBgn0002576.1 1 511 +
Chr1	gffcl	locus	156958416	156960734	.	+	.	ID=RLOC_00012890;geneIDs=comp145949_c0_seq1.path1;transcripts=comp145949_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156958416	156960734	.	+	.	ID=comp145949_c0_seq1.mrna1;geneID=comp145949_c0_seq1.path1;Name=comp145949_c0_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=802;mismatches=5;indels=0;unknowns=0;Target=comp145949_c0_seq1 607 705 +;locus=RLOC_00012890
Chr1	stalkie_big_nohaplotig	exon	156958416	156958613	98	+	.	Parent=comp145949_c0_seq1.mrna1;Target=comp145949_c0_seq1 1 198 +
Chr1	stalkie_big_nohaplotig	exon	156958748	156959017	100	+	.	Parent=comp145949_c0_seq1.mrna1;Target=comp145949_c0_seq1 199 468 +
Chr1	stalkie_big_nohaplotig	exon	156960396	156960734	99	+	.	Parent=comp145949_c0_seq1.mrna1;Target=comp145949_c0_seq1 469 807 +
Chr1	stalkie_big_nohaplotig	CDS	156960534	156960632	.	+	0	Parent=comp145949_c0_seq1.mrna1
Chr1	gffcl	locus	156969320	156969707	.	+	.	ID=RLOC_00012891;geneIDs=comp113119_c0_seq1.path1;transcripts=comp113119_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156969320	156969707	.	+	.	ID=comp113119_c0_seq1.mrna1;geneID=comp113119_c0_seq1.path1;Name=comp113119_c0_seq1;Dir=indeterminatecoverage=96.3;identity=99.7;matches=387;mismatches=1;indels=0;unknowns=0;Target=comp113119_c0_seq1 388 1 .;CDS_Target=comp113119_c0_seq1 136 2 .;locus=RLOC_00012891
Chr1	stalkie_big_nohaplotig	exon	156969320	156969707	99	+	.	Parent=comp113119_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156969321	156969455	.	+	0	Parent=comp113119_c0_seq1.mrna1
Chr1	gffcl	locus	156970137	156970692	.	+	.	ID=RLOC_00012892;geneIDs=comp144257_c0_seq1.path1;transcripts=comp144257_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156970137	156970692	.	+	.	ID=comp144257_c0_seq1.mrna1;geneID=comp144257_c0_seq1.path1;Name=comp144257_c0_seq1;Dir=indeterminatecoverage=97.0;identity=98.9;matches=551;mismatches=5;indels=1;unknowns=0;Target=comp144257_c0_seq1 574 18 .;CDS_Target=comp144257_c0_seq1 49 20 .;locus=RLOC_00012892
Chr1	stalkie_big_nohaplotig	exon	156970137	156970692	98	+	.	Parent=comp144257_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156970139	156970167	.	+	0	Parent=comp144257_c0_seq1.mrna1
Chr1	gffcl	locus	156978211	156983405	.	+	.	ID=RLOC_00012893;geneIDs=FBgn0040234.1.path1;transcripts=FBgn0040234.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156978211	156983405	.	+	.	ID=FBgn0040234.1.mrna1;geneID=FBgn0040234.1.path1;Name=FBgn0040234.1;Dir=sensecoverage=100.0;identity=99.3;matches=4192;mismatches=30;indels=0;unknowns=0;locus=RLOC_00012893
Chr1	stalkie_big_nohaplotig	exon	156978211	156978431	98	+	.	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 3 223 +
Chr1	stalkie_big_nohaplotig	exon	156978486	156978745	100	+	.	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 224 483 +
Chr1	stalkie_big_nohaplotig	exon	156978928	156979095	100	+	.	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 484 651 +
Chr1	stalkie_big_nohaplotig	exon	156979153	156979317	98	+	.	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 652 816 +
Chr1	stalkie_big_nohaplotig	exon	156979389	156979544	97	+	.	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 817 972 +
Chr1	stalkie_big_nohaplotig	exon	156979782	156980121	99	+	.	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 973 1312 +
Chr1	stalkie_big_nohaplotig	exon	156980181	156980427	99	+	.	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 1313 1559 +
Chr1	stalkie_big_nohaplotig	exon	156980494	156981217	99	+	.	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 1560 2283 +
Chr1	stalkie_big_nohaplotig	exon	156981276	156982155	99	+	.	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 2284 3163 +
Chr1	stalkie_big_nohaplotig	exon	156982223	156982754	100	+	.	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 3164 3695 +
Chr1	stalkie_big_nohaplotig	exon	156982818	156983249	99	+	.	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 3696 4127 +
Chr1	stalkie_big_nohaplotig	exon	156983309	156983405	98	+	.	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 4128 4224 +
Chr1	stalkie_big_nohaplotig	CDS	156978212	156978431	.	+	0	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 4 223 +
Chr1	stalkie_big_nohaplotig	CDS	156978486	156978745	.	+	2	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 224 483 +
Chr1	stalkie_big_nohaplotig	CDS	156978928	156979095	.	+	0	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 484 651 +
Chr1	stalkie_big_nohaplotig	CDS	156979153	156979317	.	+	0	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 652 816 +
Chr1	stalkie_big_nohaplotig	CDS	156979389	156979544	.	+	0	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 817 972 +
Chr1	stalkie_big_nohaplotig	CDS	156979782	156980121	.	+	0	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 973 1312 +
Chr1	stalkie_big_nohaplotig	CDS	156980181	156980427	.	+	2	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 1313 1559 +
Chr1	stalkie_big_nohaplotig	CDS	156980494	156981217	.	+	1	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 1560 2283 +
Chr1	stalkie_big_nohaplotig	CDS	156981276	156982155	.	+	0	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 2284 3163 +
Chr1	stalkie_big_nohaplotig	CDS	156982223	156982754	.	+	2	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 3164 3695 +
Chr1	stalkie_big_nohaplotig	CDS	156982818	156983249	.	+	1	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 3696 4127 +
Chr1	stalkie_big_nohaplotig	CDS	156983309	156983405	.	+	1	Parent=FBgn0040234.1.mrna1;Target=FBgn0040234.1 4128 4224 +
Chr1	gffcl	locus	156984061	157013693	.	-	.	ID=RLOC_00012894;geneIDs=FBgn0026323.1.path1,comp159673_c1_seq1.path1;transcripts=comp159673_c1_seq1.mrna1,FBgn0026323.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156984061	157013693	.	-	.	ID=comp159673_c1_seq1.mrna1;geneID=comp159673_c1_seq1.path1;Name=comp159673_c1_seq1;Dir=antisensecoverage=99.4;identity=99.2;matches=2779;mismatches=21;indels=2;unknowns=0;locus=RLOC_00012894
Chr1	stalkie_big_nohaplotig	exon	156984061	156984553	99	-	.	Parent=comp159673_c1_seq1.mrna1;Target=comp159673_c1_seq1 17 509 -
Chr1	stalkie_big_nohaplotig	exon	156984674	156985041	99	-	.	Parent=comp159673_c1_seq1.mrna1;Target=comp159673_c1_seq1 510 877 -
Chr1	stalkie_big_nohaplotig	exon	157010367	157010409	100	-	.	Parent=comp159673_c1_seq1.mrna1;Target=comp159673_c1_seq1 878 920 -
Chr1	stalkie_big_nohaplotig	exon	157010475	157010882	100	-	.	Parent=comp159673_c1_seq1.mrna1;Target=comp159673_c1_seq1 921 1328 -
Chr1	stalkie_big_nohaplotig	exon	157010948	157011160	97	-	.	Parent=comp159673_c1_seq1.mrna1;Target=comp159673_c1_seq1 1329 1542 -
Chr1	stalkie_big_nohaplotig	exon	157011228	157011339	97	-	.	Parent=comp159673_c1_seq1.mrna1;Target=comp159673_c1_seq1 1543 1654 -
Chr1	stalkie_big_nohaplotig	exon	157012116	157012295	100	-	.	Parent=comp159673_c1_seq1.mrna1;Target=comp159673_c1_seq1 1655 1834 -
Chr1	stalkie_big_nohaplotig	exon	157012559	157012747	98	-	.	Parent=comp159673_c1_seq1.mrna1;Target=comp159673_c1_seq1 1835 2023 -
Chr1	stalkie_big_nohaplotig	exon	157012808	157012918	100	-	.	Parent=comp159673_c1_seq1.mrna1;Target=comp159673_c1_seq1 2024 2134 -
Chr1	stalkie_big_nohaplotig	exon	157013010	157013693	98	-	.	Parent=comp159673_c1_seq1.mrna1;Target=comp159673_c1_seq1 2135 2817 -
Chr1	stalkie_big_nohaplotig	CDS	156984380	156984553	.	-	0	Parent=comp159673_c1_seq1.mrna1;Target=comp159673_c1_seq1 336 509 .
Chr1	stalkie_big_nohaplotig	CDS	156984674	156985041	.	-	2	Parent=comp159673_c1_seq1.mrna1;Target=comp159673_c1_seq1 510 877 .
Chr1	stalkie_big_nohaplotig	CDS	157010367	157010409	.	-	0	Parent=comp159673_c1_seq1.mrna1;Target=comp159673_c1_seq1 878 920 .
Chr1	stalkie_big_nohaplotig	CDS	157010475	157010882	.	-	0	Parent=comp159673_c1_seq1.mrna1;Target=comp159673_c1_seq1 921 1328 .
Chr1	stalkie_big_nohaplotig	CDS	157010948	157011079	.	-	0	Parent=comp159673_c1_seq1.mrna1;Target=comp159673_c1_seq1 1329 1460 .
Chr1	stalkie_big_nohaplotig	mRNA	156984383	157013255	.	-	.	ID=FBgn0026323.1.mrna1;geneID=FBgn0026323.1.path1;Name=FBgn0026323.1;Dir=sensecoverage=100.0;identity=99.5;matches=2023;mismatches=11;indels=0;unknowns=0;locus=RLOC_00012894
Chr1	stalkie_big_nohaplotig	exon	156984383	156984553	100	-	.	Parent=FBgn0026323.1.mrna1;Target=FBgn0026323.1 1864 2034 +
Chr1	stalkie_big_nohaplotig	exon	156984674	156985041	99	-	.	Parent=FBgn0026323.1.mrna1;Target=FBgn0026323.1 1496 1863 +
Chr1	stalkie_big_nohaplotig	exon	157010367	157010409	100	-	.	Parent=FBgn0026323.1.mrna1;Target=FBgn0026323.1 1453 1495 +
Chr1	stalkie_big_nohaplotig	exon	157010475	157010882	100	-	.	Parent=FBgn0026323.1.mrna1;Target=FBgn0026323.1 1045 1452 +
Chr1	stalkie_big_nohaplotig	exon	157010948	157011129	98	-	.	Parent=FBgn0026323.1.mrna1;Target=FBgn0026323.1 863 1044 +
Chr1	stalkie_big_nohaplotig	exon	157011204	157011339	97	-	.	Parent=FBgn0026323.1.mrna1;Target=FBgn0026323.1 727 862 +
Chr1	stalkie_big_nohaplotig	exon	157012116	157012295	100	-	.	Parent=FBgn0026323.1.mrna1;Target=FBgn0026323.1 547 726 +
Chr1	stalkie_big_nohaplotig	exon	157012559	157012747	98	-	.	Parent=FBgn0026323.1.mrna1;Target=FBgn0026323.1 358 546 +
Chr1	stalkie_big_nohaplotig	exon	157012808	157012918	100	-	.	Parent=FBgn0026323.1.mrna1;Target=FBgn0026323.1 247 357 +
Chr1	stalkie_big_nohaplotig	exon	157013010	157013255	98	-	.	Parent=FBgn0026323.1.mrna1;Target=FBgn0026323.1 1 246 +
Chr1	stalkie_big_nohaplotig	CDS	156984383	156984553	.	-	0	Parent=FBgn0026323.1.mrna1;Target=FBgn0026323.1 1864 2034 +
Chr1	stalkie_big_nohaplotig	CDS	156984674	156985041	.	-	2	Parent=FBgn0026323.1.mrna1;Target=FBgn0026323.1 1496 1863 +
Chr1	stalkie_big_nohaplotig	CDS	157010367	157010409	.	-	0	Parent=FBgn0026323.1.mrna1;Target=FBgn0026323.1 1453 1495 +
Chr1	stalkie_big_nohaplotig	CDS	157010475	157010882	.	-	0	Parent=FBgn0026323.1.mrna1;Target=FBgn0026323.1 1045 1452 +
Chr1	stalkie_big_nohaplotig	CDS	157010948	157011129	.	-	2	Parent=FBgn0026323.1.mrna1;Target=FBgn0026323.1 863 1044 +
Chr1	stalkie_big_nohaplotig	CDS	157011204	157011339	.	-	0	Parent=FBgn0026323.1.mrna1;Target=FBgn0026323.1 727 862 +
Chr1	stalkie_big_nohaplotig	CDS	157012116	157012295	.	-	0	Parent=FBgn0026323.1.mrna1;Target=FBgn0026323.1 547 726 +
Chr1	stalkie_big_nohaplotig	CDS	157012559	157012747	.	-	0	Parent=FBgn0026323.1.mrna1;Target=FBgn0026323.1 358 546 +
Chr1	stalkie_big_nohaplotig	CDS	157012808	157012918	.	-	0	Parent=FBgn0026323.1.mrna1;Target=FBgn0026323.1 247 357 +
Chr1	stalkie_big_nohaplotig	CDS	157013010	157013255	.	-	0	Parent=FBgn0026323.1.mrna1;Target=FBgn0026323.1 1 246 +
Chr1	gffcl	locus	156987191	156987464	.	+	.	ID=RLOC_00012895;geneIDs=comp68295_c0_seq1.path1;transcripts=comp68295_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	156987191	156987464	.	+	.	ID=comp68295_c0_seq1.mrna1;geneID=comp68295_c0_seq1.path1;Name=comp68295_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=272;mismatches=1;indels=1;unknowns=0;Target=comp68295_c0_seq1 273 1 .;CDS_Target=comp68295_c0_seq1 172 56 .;locus=RLOC_00012895
Chr1	stalkie_big_nohaplotig	exon	156987191	156987464	99	+	.	Parent=comp68295_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	156987247	156987363	.	+	0	Parent=comp68295_c0_seq1.mrna1
Chr1	gffcl	locus	157004523	157004863	.	+	.	ID=RLOC_00012896;geneIDs=comp52643_c0_seq1.path1;transcripts=comp52643_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157004523	157004863	.	+	.	ID=comp52643_c0_seq1.mrna1;geneID=comp52643_c0_seq1.path1;Name=comp52643_c0_seq1;Dir=indeterminatecoverage=88.1;identity=100.0;matches=341;mismatches=0;indels=0;unknowns=0;Target=comp52643_c0_seq1 362 22 .;CDS_Target=comp52643_c0_seq1 199 23 .;locus=RLOC_00012896
Chr1	stalkie_big_nohaplotig	exon	157004523	157004863	100	+	.	Parent=comp52643_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	157004524	157004700	.	+	0	Parent=comp52643_c0_seq1.mrna1
Chr1	gffcl	locus	157008209	157008533	.	+	.	ID=RLOC_00012897;geneIDs=comp118880_c0_seq1.path1;transcripts=comp118880_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157008209	157008533	.	+	.	ID=comp118880_c0_seq1.mrna1;geneID=comp118880_c0_seq1.path1;Name=comp118880_c0_seq1;Dir=sensecoverage=79.0;identity=100.0;matches=215;mismatches=0;indels=0;unknowns=0;Target=comp118880_c0_seq1 63 116 +;locus=RLOC_00012897
Chr1	stalkie_big_nohaplotig	exon	157008209	157008328	100	+	.	Parent=comp118880_c0_seq1.mrna1;Target=comp118880_c0_seq1 1 120 +
Chr1	stalkie_big_nohaplotig	exon	157008439	157008533	100	+	.	Parent=comp118880_c0_seq1.mrna1;Target=comp118880_c0_seq1 121 215 +
Chr1	stalkie_big_nohaplotig	CDS	157008271	157008324	.	+	0	Parent=comp118880_c0_seq1.mrna1
Chr1	gffcl	locus	157024260	157025381	.	-	.	ID=RLOC_00012898;geneIDs=FBgn0002413.4.path1;transcripts=FBgn0002413.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157024260	157025381	.	-	.	ID=FBgn0002413.4.mrna1;geneID=FBgn0002413.4.path1;Name=FBgn0002413.4;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1117;mismatches=5;indels=0;unknowns=0;Target=FBgn0002413.4 1122 1 .;locus=RLOC_00012898
Chr1	stalkie_big_nohaplotig	exon	157024260	157025381	99	-	.	Parent=FBgn0002413.4.mrna1
Chr1	stalkie_big_nohaplotig	CDS	157024260	157025381	.	-	0	Parent=FBgn0002413.4.mrna1
Chr1	gffcl	locus	157082663	157083198	.	-	.	ID=RLOC_00012899;geneIDs=FBgn0028858.4.path1;transcripts=FBgn0028858.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157082663	157083198	.	-	.	ID=FBgn0028858.4.mrna1;geneID=FBgn0028858.4.path1;Name=FBgn0028858.4;Dir=sensecoverage=100.0;identity=98.4;matches=440;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012899
Chr1	stalkie_big_nohaplotig	exon	157082663	157082938	97	-	.	Parent=FBgn0028858.4.mrna1;Target=FBgn0028858.4 172 447 +
Chr1	stalkie_big_nohaplotig	exon	157083028	157083198	99	-	.	Parent=FBgn0028858.4.mrna1;Target=FBgn0028858.4 1 171 +
Chr1	stalkie_big_nohaplotig	CDS	157082663	157082938	.	-	0	Parent=FBgn0028858.4.mrna1;Target=FBgn0028858.4 172 447 +
Chr1	stalkie_big_nohaplotig	CDS	157083028	157083198	.	-	0	Parent=FBgn0028858.4.mrna1;Target=FBgn0028858.4 1 171 +
Chr1	gffcl	locus	157094314	157096544	.	+	.	ID=RLOC_00012900;geneIDs=FBgn0031126.1.path1,comp116778_c0_seq1.path1;transcripts=FBgn0031126.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157094314	157096090	.	+	.	ID=FBgn0031126.1.mrna1;geneID=FBgn0031126.1.path1;Name=FBgn0031126.1;Dir=sensecoverage=100.0;identity=99.9;matches=1655;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012900
Chr1	stalkie_big_nohaplotig	exon	157094314	157094889	100	+	.	Parent=FBgn0031126.1.mrna1;Target=FBgn0031126.1 1 576 +
Chr1	stalkie_big_nohaplotig	exon	157094955	157095758	99	+	.	Parent=FBgn0031126.1.mrna1;Target=FBgn0031126.1 577 1380 +
Chr1	stalkie_big_nohaplotig	exon	157095815	157096090	100	+	.	Parent=FBgn0031126.1.mrna1;Target=FBgn0031126.1 1381 1656 +
Chr1	stalkie_big_nohaplotig	CDS	157094314	157094889	.	+	0	Parent=FBgn0031126.1.mrna1;Target=FBgn0031126.1 1 576 +
Chr1	stalkie_big_nohaplotig	CDS	157094955	157095758	.	+	0	Parent=FBgn0031126.1.mrna1;Target=FBgn0031126.1 577 1380 +
Chr1	stalkie_big_nohaplotig	CDS	157095815	157096090	.	+	0	Parent=FBgn0031126.1.mrna1;Target=FBgn0031126.1 1381 1656 +
Chr1	gffcl	locus	157152434	157153555	.	-	.	ID=RLOC_00012901;geneIDs=FBgn0002413.4.path2;transcripts=FBgn0002413.4.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	157152434	157153555	.	-	.	ID=FBgn0002413.4.mrna2;geneID=FBgn0002413.4.path2;Name=FBgn0002413.4;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1117;mismatches=5;indels=0;unknowns=0;Target=FBgn0002413.4 1122 1 .;locus=RLOC_00012901
Chr1	stalkie_big_nohaplotig	exon	157152434	157153555	99	-	.	Parent=FBgn0002413.4.mrna2
Chr1	stalkie_big_nohaplotig	CDS	157152434	157153555	.	-	0	Parent=FBgn0002413.4.mrna2
Chr1	gffcl	locus	157193865	157194375	.	+	.	ID=RLOC_00012902;geneIDs=comp148818_c0_seq1.path1;transcripts=comp148818_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157193865	157194375	.	+	.	ID=comp148818_c0_seq1.mrna1;geneID=comp148818_c0_seq1.path1;Name=comp148818_c0_seq1;Dir=antisensecoverage=98.3;identity=96.4;matches=434;mismatches=13;indels=3;unknowns=0;Target=comp148818_c0_seq1 238 363 .;locus=RLOC_00012902
Chr1	stalkie_big_nohaplotig	exon	157193865	157194165	96	+	.	Parent=comp148818_c0_seq1.mrna1;Target=comp148818_c0_seq1 155 458 -
Chr1	stalkie_big_nohaplotig	exon	157194230	157194375	96	+	.	Parent=comp148818_c0_seq1.mrna1;Target=comp148818_c0_seq1 9 154 -
Chr1	stalkie_big_nohaplotig	CDS	157193960	157194085	.	+	0	Parent=comp148818_c0_seq1.mrna1
Chr1	gffcl	locus	157296783	157297448	.	+	.	ID=RLOC_00012903;geneIDs=FBgn0028858.1.path1;transcripts=FBgn0028858.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157296783	157297448	.	+	.	ID=FBgn0028858.1.mrna1;geneID=FBgn0028858.1.path1;Name=FBgn0028858.1;Dir=sensecoverage=100.0;identity=100.0;matches=579;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012903
Chr1	stalkie_big_nohaplotig	exon	157296783	157297064	100	+	.	Parent=FBgn0028858.1.mrna1;Target=FBgn0028858.1 1 282 +
Chr1	stalkie_big_nohaplotig	exon	157297152	157297448	100	+	.	Parent=FBgn0028858.1.mrna1;Target=FBgn0028858.1 283 579 +
Chr1	stalkie_big_nohaplotig	CDS	157296783	157297064	.	+	0	Parent=FBgn0028858.1.mrna1;Target=FBgn0028858.1 1 282 +
Chr1	stalkie_big_nohaplotig	CDS	157297152	157297448	.	+	0	Parent=FBgn0028858.1.mrna1;Target=FBgn0028858.1 283 579 +
Chr1	gffcl	locus	157300501	157301022	.	+	.	ID=RLOC_00012904;geneIDs=FBgn0028858.4.path2;transcripts=FBgn0028858.4.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	157300501	157301022	.	+	.	ID=FBgn0028858.4.mrna2;geneID=FBgn0028858.4.path2;Name=FBgn0028858.4;Dir=sensecoverage=100.0;identity=97.8;matches=437;mismatches=10;indels=0;unknowns=0;locus=RLOC_00012904
Chr1	stalkie_big_nohaplotig	exon	157300501	157300671	98	+	.	Parent=FBgn0028858.4.mrna2;Target=FBgn0028858.4 1 171 +
Chr1	stalkie_big_nohaplotig	exon	157300747	157301022	97	+	.	Parent=FBgn0028858.4.mrna2;Target=FBgn0028858.4 172 447 +
Chr1	stalkie_big_nohaplotig	CDS	157300501	157300671	.	+	0	Parent=FBgn0028858.4.mrna2;Target=FBgn0028858.4 1 171 +
Chr1	stalkie_big_nohaplotig	CDS	157300747	157301022	.	+	0	Parent=FBgn0028858.4.mrna2;Target=FBgn0028858.4 172 447 +
Chr1	gffcl	locus	157315214	157320420	.	-	.	ID=RLOC_00012905;geneIDs=comp115950_c0_seq1.path1;transcripts=comp115950_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157315214	157320420	.	-	.	ID=comp115950_c0_seq1.mrna1;geneID=comp115950_c0_seq1.path1;Name=comp115950_c0_seq1;Dir=antisensecoverage=94.5;identity=100.0;matches=415;mismatches=0;indels=0;unknowns=0;Target=comp115950_c0_seq1 133 306 .;locus=RLOC_00012905
Chr1	stalkie_big_nohaplotig	exon	157315214	157315234	100	-	.	Parent=comp115950_c0_seq1.mrna1;Target=comp115950_c0_seq1 1 21 -
Chr1	stalkie_big_nohaplotig	exon	157320027	157320420	100	-	.	Parent=comp115950_c0_seq1.mrna1;Target=comp115950_c0_seq1 22 415 -
Chr1	stalkie_big_nohaplotig	CDS	157320138	157320311	.	-	0	Parent=comp115950_c0_seq1.mrna1
Chr1	gffcl	locus	157365278	157367788	.	+	.	ID=RLOC_00012907;geneIDs=ORF201.path1;transcripts=ORF201.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157365278	157367788	.	+	.	ID=ORF201.mrna1;geneID=ORF201.path1;Name=ORF201;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2511;mismatches=0;indels=0;unknowns=0;Target=ORF201 2511 1 .;locus=RLOC_00012907
Chr1	stalkie_big_nohaplotig	exon	157365278	157367788	100	+	.	Parent=ORF201.mrna1
Chr1	stalkie_big_nohaplotig	CDS	157365278	157367788	.	+	0	Parent=ORF201.mrna1
Chr1	gffcl	locus	157372664	157375174	.	-	.	ID=RLOC_00012908;geneIDs=ORF201.path2;transcripts=ORF201.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	157372664	157375174	.	-	.	ID=ORF201.mrna2;geneID=ORF201.path2;Name=ORF201;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2511;mismatches=0;indels=0;unknowns=0;Target=ORF201 2511 1 .;locus=RLOC_00012908
Chr1	stalkie_big_nohaplotig	exon	157372664	157375174	100	-	.	Parent=ORF201.mrna2
Chr1	stalkie_big_nohaplotig	CDS	157372664	157375174	.	-	0	Parent=ORF201.mrna2
Chr1	gffcl	locus	157410713	157413039	.	+	.	ID=RLOC_00012909;geneIDs=comp161478_c2_seq1.path1;transcripts=comp161478_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157410713	157413039	.	+	.	ID=comp161478_c2_seq1.mrna1;geneID=comp161478_c2_seq1.path1;Name=comp161478_c2_seq1;Dir=sensecoverage=80.5;identity=98.8;matches=1277;mismatches=12;indels=4;unknowns=0;Target=comp161478_c2_seq1 447 596 +;locus=RLOC_00012909
Chr1	stalkie_big_nohaplotig	exon	157410713	157411064	98	+	.	Parent=comp161478_c2_seq1.mrna1;Target=comp161478_c2_seq1 302 656 +
Chr1	stalkie_big_nohaplotig	exon	157411157	157411267	99	+	.	Parent=comp161478_c2_seq1.mrna1;Target=comp161478_c2_seq1 657 767 +
Chr1	stalkie_big_nohaplotig	exon	157411394	157411663	98	+	.	Parent=comp161478_c2_seq1.mrna1;Target=comp161478_c2_seq1 768 1038 +
Chr1	stalkie_big_nohaplotig	exon	157411727	157411843	99	+	.	Parent=comp161478_c2_seq1.mrna1;Target=comp161478_c2_seq1 1039 1155 +
Chr1	stalkie_big_nohaplotig	exon	157411900	157411961	98	+	.	Parent=comp161478_c2_seq1.mrna1;Target=comp161478_c2_seq1 1156 1217 +
Chr1	stalkie_big_nohaplotig	exon	157412467	157412553	96	+	.	Parent=comp161478_c2_seq1.mrna1;Target=comp161478_c2_seq1 1218 1304 +
Chr1	stalkie_big_nohaplotig	exon	157412624	157412695	100	+	.	Parent=comp161478_c2_seq1.mrna1;Target=comp161478_c2_seq1 1305 1376 +
Chr1	stalkie_big_nohaplotig	exon	157412758	157412857	100	+	.	Parent=comp161478_c2_seq1.mrna1;Target=comp161478_c2_seq1 1377 1476 +
Chr1	stalkie_big_nohaplotig	exon	157412922	157413039	99	+	.	Parent=comp161478_c2_seq1.mrna1;Target=comp161478_c2_seq1 1477 1594 +
Chr1	stalkie_big_nohaplotig	CDS	157410855	157411004	.	+	0	Parent=comp161478_c2_seq1.mrna1
Chr1	gffcl	locus	157431049	157431699	.	-	.	ID=RLOC_00012910;geneIDs=comp150281_c0_seq1.path1;transcripts=comp150281_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157431049	157431699	.	-	.	ID=comp150281_c0_seq1.mrna1;geneID=comp150281_c0_seq1.path1;Name=comp150281_c0_seq1;Dir=indeterminatecoverage=96.4;identity=94.8;matches=617;mismatches=34;indels=0;unknowns=0;Target=comp150281_c0_seq1 651 1 .;CDS_Target=comp150281_c0_seq1 505 329 .;locus=RLOC_00012910
Chr1	stalkie_big_nohaplotig	exon	157431049	157431699	94	-	.	Parent=comp150281_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	157431195	157431371	.	-	0	Parent=comp150281_c0_seq1.mrna1
Chr1	gffcl	locus	157462939	157463868	.	-	.	ID=RLOC_00012911;geneIDs=FBgn0035754.1.path1;transcripts=FBgn0035754.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157462939	157463868	.	-	.	ID=FBgn0035754.1.mrna1;geneID=FBgn0035754.1.path1;Name=FBgn0035754.1;Dir=sensecoverage=100.0;identity=99.6;matches=813;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012911
Chr1	stalkie_big_nohaplotig	exon	157462939	157463448	99	-	.	Parent=FBgn0035754.1.mrna1;Target=FBgn0035754.1 307 816 +
Chr1	stalkie_big_nohaplotig	exon	157463503	157463683	99	-	.	Parent=FBgn0035754.1.mrna1;Target=FBgn0035754.1 126 306 +
Chr1	stalkie_big_nohaplotig	exon	157463744	157463868	99	-	.	Parent=FBgn0035754.1.mrna1;Target=FBgn0035754.1 1 125 +
Chr1	stalkie_big_nohaplotig	CDS	157462939	157463448	.	-	0	Parent=FBgn0035754.1.mrna1;Target=FBgn0035754.1 307 816 +
Chr1	stalkie_big_nohaplotig	CDS	157463503	157463683	.	-	1	Parent=FBgn0035754.1.mrna1;Target=FBgn0035754.1 126 306 +
Chr1	stalkie_big_nohaplotig	CDS	157463744	157463868	.	-	0	Parent=FBgn0035754.1.mrna1;Target=FBgn0035754.1 1 125 +
Chr1	gffcl	locus	157465013	157467773	.	+	.	ID=RLOC_00012912;geneIDs=FBgn0030289.1.path1;transcripts=FBgn0030289.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157465013	157467773	.	+	.	ID=FBgn0030289.1.mrna1;geneID=FBgn0030289.1.path1;Name=FBgn0030289.1;Dir=sensecoverage=100.0;identity=100.0;matches=2648;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012912
Chr1	stalkie_big_nohaplotig	exon	157465013	157465888	99	+	.	Parent=FBgn0030289.1.mrna1;Target=FBgn0030289.1 1 876 +
Chr1	stalkie_big_nohaplotig	exon	157465949	157466840	100	+	.	Parent=FBgn0030289.1.mrna1;Target=FBgn0030289.1 877 1768 +
Chr1	stalkie_big_nohaplotig	exon	157466893	157467773	100	+	.	Parent=FBgn0030289.1.mrna1;Target=FBgn0030289.1 1769 2649 +
Chr1	stalkie_big_nohaplotig	CDS	157465013	157465888	.	+	0	Parent=FBgn0030289.1.mrna1;Target=FBgn0030289.1 1 876 +
Chr1	stalkie_big_nohaplotig	CDS	157465949	157466840	.	+	0	Parent=FBgn0030289.1.mrna1;Target=FBgn0030289.1 877 1768 +
Chr1	stalkie_big_nohaplotig	CDS	157466893	157467773	.	+	2	Parent=FBgn0030289.1.mrna1;Target=FBgn0030289.1 1769 2649 +
Chr1	gffcl	locus	157471352	157480503	.	-	.	ID=RLOC_00012913;geneIDs=FBgn0085377.1.path1;transcripts=FBgn0085377.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157471352	157480503	.	-	.	ID=FBgn0085377.1.mrna1;geneID=FBgn0085377.1.path1;Name=FBgn0085377.1;Dir=sensecoverage=100.0;identity=99.8;matches=973;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012913
Chr1	stalkie_big_nohaplotig	exon	157471352	157471456	99	-	.	Parent=FBgn0085377.1.mrna1;Target=FBgn0085377.1 871 975 +
Chr1	stalkie_big_nohaplotig	exon	157471525	157472191	100	-	.	Parent=FBgn0085377.1.mrna1;Target=FBgn0085377.1 204 870 +
Chr1	stalkie_big_nohaplotig	exon	157480178	157480316	99	-	.	Parent=FBgn0085377.1.mrna1;Target=FBgn0085377.1 65 203 +
Chr1	stalkie_big_nohaplotig	exon	157480440	157480503	100	-	.	Parent=FBgn0085377.1.mrna1;Target=FBgn0085377.1 1 64 +
Chr1	stalkie_big_nohaplotig	CDS	157471352	157471456	.	-	0	Parent=FBgn0085377.1.mrna1;Target=FBgn0085377.1 871 975 +
Chr1	stalkie_big_nohaplotig	CDS	157471525	157472191	.	-	1	Parent=FBgn0085377.1.mrna1;Target=FBgn0085377.1 204 870 +
Chr1	stalkie_big_nohaplotig	CDS	157480178	157480316	.	-	2	Parent=FBgn0085377.1.mrna1;Target=FBgn0085377.1 65 203 +
Chr1	stalkie_big_nohaplotig	CDS	157480440	157480503	.	-	0	Parent=FBgn0085377.1.mrna1;Target=FBgn0085377.1 1 64 +
Chr1	gffcl	locus	157475836	157494856	.	.	.	ID=RLOC_00012914;geneIDs=comp51886_c0_seq1.path1,comp93568_c0_seq1.path1;transcripts=comp93568_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157475836	157493664	.	+	.	ID=comp93568_c0_seq1.mrna1;geneID=comp93568_c0_seq1.path1;Name=comp93568_c0_seq1;Dir=indeterminatecoverage=90.0;identity=99.8;matches=467;mismatches=1;indels=0;unknowns=0;Target=comp93568_c0_seq1 354 298 .;locus=RLOC_00012914
Chr1	stalkie_big_nohaplotig	exon	157475836	157475838	100	+	.	Parent=comp93568_c0_seq1.mrna1;Target=comp93568_c0_seq1 55 53 .
Chr1	stalkie_big_nohaplotig	exon	157485219	157485223	100	+	.	Parent=comp93568_c0_seq1.mrna1;Target=comp93568_c0_seq1 60 56 .
Chr1	stalkie_big_nohaplotig	exon	157493205	157493664	99	+	.	Parent=comp93568_c0_seq1.mrna1;Target=comp93568_c0_seq1 520 61 .
Chr1	stalkie_big_nohaplotig	CDS	157493442	157493498	.	+	0	Parent=comp93568_c0_seq1.mrna1
Chr1	gffcl	locus	157481690	157482523	.	-	.	ID=RLOC_00012915;geneIDs=comp155871_c0_seq1.path1;transcripts=comp155871_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157481690	157482523	.	-	.	ID=comp155871_c0_seq1.mrna1;geneID=comp155871_c0_seq1.path1;Name=comp155871_c0_seq1;Dir=indeterminatecoverage=75.7;identity=97.9;matches=821;mismatches=13;indels=5;unknowns=0;Target=comp155871_c0_seq1 839 1 .;CDS_Target=comp155871_c0_seq1 758 645 .;locus=RLOC_00012915
Chr1	stalkie_big_nohaplotig	exon	157481690	157482523	97	-	.	Parent=comp155871_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	157481766	157481879	.	-	0	Parent=comp155871_c0_seq1.mrna1
Chr1	gffcl	locus	157482777	157486966	.	.	.	ID=RLOC_00012916;geneIDs=FBgn0024807.1.path1,comp150052_c2_seq1.path1,comp163023_c0_seq1.path1;transcripts=FBgn0024807.1.mrna1,comp163023_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157482777	157486966	.	-	.	ID=FBgn0024807.1.mrna1;geneID=FBgn0024807.1.path1;Name=FBgn0024807.1;Dir=sensecoverage=100.0;identity=99.7;matches=1119;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012916
Chr1	stalkie_big_nohaplotig	exon	157482777	157482965	100	-	.	Parent=FBgn0024807.1.mrna1;Target=FBgn0024807.1 934 1122 +
Chr1	stalkie_big_nohaplotig	exon	157483029	157483279	100	-	.	Parent=FBgn0024807.1.mrna1;Target=FBgn0024807.1 683 933 +
Chr1	stalkie_big_nohaplotig	exon	157483342	157483668	100	-	.	Parent=FBgn0024807.1.mrna1;Target=FBgn0024807.1 356 682 +
Chr1	stalkie_big_nohaplotig	exon	157483738	157484023	99	-	.	Parent=FBgn0024807.1.mrna1;Target=FBgn0024807.1 70 355 +
Chr1	stalkie_big_nohaplotig	exon	157486898	157486966	97	-	.	Parent=FBgn0024807.1.mrna1;Target=FBgn0024807.1 1 69 +
Chr1	stalkie_big_nohaplotig	CDS	157482777	157482965	.	-	0	Parent=FBgn0024807.1.mrna1;Target=FBgn0024807.1 934 1122 +
Chr1	stalkie_big_nohaplotig	CDS	157483029	157483279	.	-	2	Parent=FBgn0024807.1.mrna1;Target=FBgn0024807.1 683 933 +
Chr1	stalkie_big_nohaplotig	CDS	157483342	157483668	.	-	2	Parent=FBgn0024807.1.mrna1;Target=FBgn0024807.1 356 682 +
Chr1	stalkie_big_nohaplotig	CDS	157483738	157484023	.	-	0	Parent=FBgn0024807.1.mrna1;Target=FBgn0024807.1 70 355 +
Chr1	stalkie_big_nohaplotig	CDS	157486898	157486966	.	-	0	Parent=FBgn0024807.1.mrna1;Target=FBgn0024807.1 1 69 +
Chr1	stalkie_big_nohaplotig	mRNA	157485417	157486921	.	+	.	ID=comp163023_c0_seq1.mrna1;geneID=comp163023_c0_seq1.path1;Name=comp163023_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.7;matches=1480;mismatches=23;indels=12;unknowns=0;Target=comp163023_c0_seq1 1514 2 .;CDS_Target=comp163023_c0_seq1 270 118 .;locus=RLOC_00012916
Chr1	stalkie_big_nohaplotig	exon	157485417	157486921	97	+	.	Parent=comp163023_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	157485533	157485682	.	+	0	Parent=comp163023_c0_seq1.mrna1
Chr1	gffcl	locus	157492127	157493028	.	-	.	ID=RLOC_00012917;geneIDs=comp151130_c0_seq1.path1;transcripts=comp151130_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157492127	157493028	.	-	.	ID=comp151130_c0_seq1.mrna1;geneID=comp151130_c0_seq1.path1;Name=comp151130_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=899;mismatches=3;indels=4;unknowns=0;Target=comp151130_c0_seq1 906 1 .;CDS_Target=comp151130_c0_seq1 282 67 .;locus=RLOC_00012917
Chr1	stalkie_big_nohaplotig	exon	157492127	157493028	99	-	.	Parent=comp151130_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	157492747	157492962	.	-	0	Parent=comp151130_c0_seq1.mrna1
Chr1	gffcl	locus	157497708	157520121	.	+	.	ID=RLOC_00012918;geneIDs=FBgn0011764.1.path1;transcripts=FBgn0011764.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157497708	157520121	.	+	.	ID=FBgn0011764.1.mrna1;geneID=FBgn0011764.1.path1;Name=FBgn0011764.1;Dir=sensecoverage=100.0;identity=99.5;matches=800;mismatches=1;indels=3;unknowns=0;locus=RLOC_00012918
Chr1	stalkie_big_nohaplotig	exon	157497708	157497821	96	+	.	Parent=FBgn0011764.1.mrna1;Target=FBgn0011764.1 1 111 +
Chr1	stalkie_big_nohaplotig	exon	157514424	157514591	100	+	.	Parent=FBgn0011764.1.mrna1;Target=FBgn0011764.1 112 279 +
Chr1	stalkie_big_nohaplotig	exon	157518647	157518810	100	+	.	Parent=FBgn0011764.1.mrna1;Target=FBgn0011764.1 280 443 +
Chr1	stalkie_big_nohaplotig	exon	157518901	157519075	100	+	.	Parent=FBgn0011764.1.mrna1;Target=FBgn0011764.1 444 618 +
Chr1	stalkie_big_nohaplotig	exon	157519939	157520121	100	+	.	Parent=FBgn0011764.1.mrna1;Target=FBgn0011764.1 619 801 +
Chr1	stalkie_big_nohaplotig	CDS	157497708	157497821	.	+	0	Parent=FBgn0011764.1.mrna1;Target=FBgn0011764.1 1 111 +
Chr1	stalkie_big_nohaplotig	CDS	157514424	157514591	.	+	0	Parent=FBgn0011764.1.mrna1;Target=FBgn0011764.1 112 279 +
Chr1	stalkie_big_nohaplotig	CDS	157518647	157518810	.	+	0	Parent=FBgn0011764.1.mrna1;Target=FBgn0011764.1 280 443 +
Chr1	stalkie_big_nohaplotig	CDS	157518901	157519075	.	+	1	Parent=FBgn0011764.1.mrna1;Target=FBgn0011764.1 444 618 +
Chr1	stalkie_big_nohaplotig	CDS	157519939	157520121	.	+	0	Parent=FBgn0011764.1.mrna1;Target=FBgn0011764.1 619 801 +
Chr1	gffcl	locus	157506954	157521098	.	+	.	ID=RLOC_00012919;geneIDs=comp135979_c0_seq1.path1;transcripts=comp135979_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157506954	157521098	.	+	.	ID=comp135979_c0_seq1.mrna1;geneID=comp135979_c0_seq1.path1;Name=comp135979_c0_seq1;Dir=indeterminatecoverage=68.4;identity=99.6;matches=268;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012919
Chr1	stalkie_big_nohaplotig	exon	157506954	157506961	100	+	.	Parent=comp135979_c0_seq1.mrna1;Target=comp135979_c0_seq1 135 128 .
Chr1	stalkie_big_nohaplotig	exon	157510628	157510635	100	+	.	Parent=comp135979_c0_seq1.mrna1;Target=comp135979_c0_seq1 143 136 .
Chr1	stalkie_big_nohaplotig	exon	157512696	157512705	90	+	.	Parent=comp135979_c0_seq1.mrna1;Target=comp135979_c0_seq1 153 144 .
Chr1	stalkie_big_nohaplotig	exon	157520856	157521098	100	+	.	Parent=comp135979_c0_seq1.mrna1;Target=comp135979_c0_seq1 402 160 .
Chr1	stalkie_big_nohaplotig	CDS	157506955	157506961	.	+	0	Parent=comp135979_c0_seq1.mrna1;Target=comp135979_c0_seq1 135 129 .
Chr1	stalkie_big_nohaplotig	CDS	157510628	157510635	.	+	2	Parent=comp135979_c0_seq1.mrna1;Target=comp135979_c0_seq1 143 136 .
Chr1	stalkie_big_nohaplotig	CDS	157512696	157512705	.	+	0	Parent=comp135979_c0_seq1.mrna1;Target=comp135979_c0_seq1 153 144 .
Chr1	stalkie_big_nohaplotig	CDS	157520856	157520908	.	+	2	Parent=comp135979_c0_seq1.mrna1;Target=comp135979_c0_seq1 212 160 .
Chr1	gffcl	locus	157522493	157522764	.	-	.	ID=RLOC_00012920;geneIDs=comp46422_c0_seq1.path1;transcripts=comp46422_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157522493	157522764	.	-	.	ID=comp46422_c0_seq1.mrna1;geneID=comp46422_c0_seq1.path1;Name=comp46422_c0_seq1;Dir=indeterminatecoverage=86.6;identity=100.0;matches=272;mismatches=0;indels=0;unknowns=0;Target=comp46422_c0_seq1 314 43 .;CDS_Target=comp46422_c0_seq1 179 117 .;locus=RLOC_00012920
Chr1	stalkie_big_nohaplotig	exon	157522493	157522764	100	-	.	Parent=comp46422_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	157522628	157522690	.	-	0	Parent=comp46422_c0_seq1.mrna1
Chr1	gffcl	locus	157526081	157527747	.	+	.	ID=RLOC_00012921;geneIDs=FBgn0052579.1.path1;transcripts=FBgn0052579.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157526081	157527747	.	+	.	ID=FBgn0052579.1.mrna1;geneID=FBgn0052579.1.path1;Name=FBgn0052579.1;Dir=sensecoverage=100.0;identity=99.8;matches=1246;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012921
Chr1	stalkie_big_nohaplotig	exon	157526081	157526436	100	+	.	Parent=FBgn0052579.1.mrna1;Target=FBgn0052579.1 1 356 +
Chr1	stalkie_big_nohaplotig	exon	157526495	157526581	100	+	.	Parent=FBgn0052579.1.mrna1;Target=FBgn0052579.1 357 443 +
Chr1	stalkie_big_nohaplotig	exon	157526643	157526717	100	+	.	Parent=FBgn0052579.1.mrna1;Target=FBgn0052579.1 444 518 +
Chr1	stalkie_big_nohaplotig	exon	157526836	157526969	99	+	.	Parent=FBgn0052579.1.mrna1;Target=FBgn0052579.1 519 652 +
Chr1	stalkie_big_nohaplotig	exon	157527023	157527175	100	+	.	Parent=FBgn0052579.1.mrna1;Target=FBgn0052579.1 653 805 +
Chr1	stalkie_big_nohaplotig	exon	157527305	157527747	99	+	.	Parent=FBgn0052579.1.mrna1;Target=FBgn0052579.1 806 1248 +
Chr1	stalkie_big_nohaplotig	CDS	157526081	157526436	.	+	0	Parent=FBgn0052579.1.mrna1;Target=FBgn0052579.1 1 356 +
Chr1	stalkie_big_nohaplotig	CDS	157526495	157526581	.	+	1	Parent=FBgn0052579.1.mrna1;Target=FBgn0052579.1 357 443 +
Chr1	stalkie_big_nohaplotig	CDS	157526643	157526717	.	+	1	Parent=FBgn0052579.1.mrna1;Target=FBgn0052579.1 444 518 +
Chr1	stalkie_big_nohaplotig	CDS	157526836	157526969	.	+	1	Parent=FBgn0052579.1.mrna1;Target=FBgn0052579.1 519 652 +
Chr1	stalkie_big_nohaplotig	CDS	157527023	157527175	.	+	2	Parent=FBgn0052579.1.mrna1;Target=FBgn0052579.1 653 805 +
Chr1	stalkie_big_nohaplotig	CDS	157527305	157527747	.	+	2	Parent=FBgn0052579.1.mrna1;Target=FBgn0052579.1 806 1248 +
Chr1	gffcl	locus	157529682	157530438	.	-	.	ID=RLOC_00012922;geneIDs=FBgn0032870.1.path1;transcripts=FBgn0032870.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157529682	157530438	.	-	.	ID=FBgn0032870.1.mrna1;geneID=FBgn0032870.1.path1;Name=FBgn0032870.1;Dir=indeterminatecoverage=99.3;identity=99.9;matches=756;mismatches=1;indels=0;unknowns=0;Target=FBgn0032870.1 762 6 .;CDS_Target=FBgn0032870.1 762 7 .;locus=RLOC_00012922
Chr1	stalkie_big_nohaplotig	exon	157529682	157530438	99	-	.	Parent=FBgn0032870.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	157529682	157530437	.	-	0	Parent=FBgn0032870.1.mrna1
Chr1	gffcl	locus	157537641	157541324	.	+	.	ID=RLOC_00012924;geneIDs=FBgn0034271.1.path1;transcripts=FBgn0034271.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157537641	157541324	.	+	.	ID=FBgn0034271.1.mrna1;geneID=FBgn0034271.1.path1;Name=FBgn0034271.1;Dir=sensecoverage=100.0;identity=100.0;matches=2856;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012924
Chr1	stalkie_big_nohaplotig	exon	157537641	157537712	100	+	.	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 1 72 +
Chr1	stalkie_big_nohaplotig	exon	157537773	157538000	100	+	.	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 73 300 +
Chr1	stalkie_big_nohaplotig	exon	157538067	157538384	100	+	.	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 301 618 +
Chr1	stalkie_big_nohaplotig	exon	157538451	157538639	100	+	.	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 619 807 +
Chr1	stalkie_big_nohaplotig	exon	157538701	157538787	100	+	.	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 808 894 +
Chr1	stalkie_big_nohaplotig	exon	157538845	157539426	100	+	.	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 895 1476 +
Chr1	stalkie_big_nohaplotig	exon	157539489	157539829	100	+	.	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 1477 1817 +
Chr1	stalkie_big_nohaplotig	exon	157539893	157540058	100	+	.	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 1818 1983 +
Chr1	stalkie_big_nohaplotig	exon	157540202	157540312	100	+	.	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 1984 2094 +
Chr1	stalkie_big_nohaplotig	exon	157540373	157540696	100	+	.	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 2095 2418 +
Chr1	stalkie_big_nohaplotig	exon	157540815	157540927	100	+	.	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 2419 2531 +
Chr1	stalkie_big_nohaplotig	exon	157541000	157541324	100	+	.	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 2532 2856 +
Chr1	stalkie_big_nohaplotig	CDS	157537641	157537712	.	+	0	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 1 72 +
Chr1	stalkie_big_nohaplotig	CDS	157537773	157538000	.	+	0	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 73 300 +
Chr1	stalkie_big_nohaplotig	CDS	157538067	157538384	.	+	0	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 301 618 +
Chr1	stalkie_big_nohaplotig	CDS	157538451	157538639	.	+	0	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 619 807 +
Chr1	stalkie_big_nohaplotig	CDS	157538701	157538787	.	+	0	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 808 894 +
Chr1	stalkie_big_nohaplotig	CDS	157538845	157539426	.	+	0	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 895 1476 +
Chr1	stalkie_big_nohaplotig	CDS	157539489	157539829	.	+	0	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 1477 1817 +
Chr1	stalkie_big_nohaplotig	CDS	157539893	157540058	.	+	1	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 1818 1983 +
Chr1	stalkie_big_nohaplotig	CDS	157540202	157540312	.	+	0	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 1984 2094 +
Chr1	stalkie_big_nohaplotig	CDS	157540373	157540696	.	+	0	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 2095 2418 +
Chr1	stalkie_big_nohaplotig	CDS	157540815	157540927	.	+	0	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 2419 2531 +
Chr1	stalkie_big_nohaplotig	CDS	157541000	157541324	.	+	1	Parent=FBgn0034271.1.mrna1;Target=FBgn0034271.1 2532 2856 +
Chr1	gffcl	locus	157542217	157543546	.	-	.	ID=RLOC_00012925;geneIDs=FBgn0052187.1.path1;transcripts=FBgn0052187.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157542217	157543546	.	-	.	ID=FBgn0052187.1.mrna1;geneID=FBgn0052187.1.path1;Name=FBgn0052187.1;Dir=sensecoverage=100.0;identity=100.0;matches=1275;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012925
Chr1	stalkie_big_nohaplotig	exon	157542217	157543098	100	-	.	Parent=FBgn0052187.1.mrna1;Target=FBgn0052187.1 394 1275 +
Chr1	stalkie_big_nohaplotig	exon	157543154	157543546	100	-	.	Parent=FBgn0052187.1.mrna1;Target=FBgn0052187.1 1 393 +
Chr1	stalkie_big_nohaplotig	CDS	157542217	157543098	.	-	0	Parent=FBgn0052187.1.mrna1;Target=FBgn0052187.1 394 1275 +
Chr1	stalkie_big_nohaplotig	CDS	157543154	157543546	.	-	0	Parent=FBgn0052187.1.mrna1;Target=FBgn0052187.1 1 393 +
Chr1	gffcl	locus	157543801	157545893	.	+	.	ID=RLOC_00012926;geneIDs=FBgn0036754.1.path1;transcripts=FBgn0036754.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157543801	157545893	.	+	.	ID=FBgn0036754.1.mrna1;geneID=FBgn0036754.1.path1;Name=FBgn0036754.1;Dir=sensecoverage=100.0;identity=99.9;matches=1790;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012926
Chr1	stalkie_big_nohaplotig	exon	157543801	157543881	100	+	.	Parent=FBgn0036754.1.mrna1;Target=FBgn0036754.1 1 81 +
Chr1	stalkie_big_nohaplotig	exon	157543945	157544154	99	+	.	Parent=FBgn0036754.1.mrna1;Target=FBgn0036754.1 82 291 +
Chr1	stalkie_big_nohaplotig	exon	157544221	157544735	100	+	.	Parent=FBgn0036754.1.mrna1;Target=FBgn0036754.1 292 806 +
Chr1	stalkie_big_nohaplotig	exon	157544794	157545127	100	+	.	Parent=FBgn0036754.1.mrna1;Target=FBgn0036754.1 807 1140 +
Chr1	stalkie_big_nohaplotig	exon	157545188	157545498	100	+	.	Parent=FBgn0036754.1.mrna1;Target=FBgn0036754.1 1141 1451 +
Chr1	stalkie_big_nohaplotig	exon	157545554	157545893	100	+	.	Parent=FBgn0036754.1.mrna1;Target=FBgn0036754.1 1452 1791 +
Chr1	stalkie_big_nohaplotig	CDS	157543801	157543881	.	+	0	Parent=FBgn0036754.1.mrna1;Target=FBgn0036754.1 1 81 +
Chr1	stalkie_big_nohaplotig	CDS	157543945	157544154	.	+	0	Parent=FBgn0036754.1.mrna1;Target=FBgn0036754.1 82 291 +
Chr1	stalkie_big_nohaplotig	CDS	157544221	157544735	.	+	0	Parent=FBgn0036754.1.mrna1;Target=FBgn0036754.1 292 806 +
Chr1	stalkie_big_nohaplotig	CDS	157544794	157545127	.	+	1	Parent=FBgn0036754.1.mrna1;Target=FBgn0036754.1 807 1140 +
Chr1	stalkie_big_nohaplotig	CDS	157545188	157545498	.	+	0	Parent=FBgn0036754.1.mrna1;Target=FBgn0036754.1 1141 1451 +
Chr1	stalkie_big_nohaplotig	CDS	157545554	157545893	.	+	1	Parent=FBgn0036754.1.mrna1;Target=FBgn0036754.1 1452 1791 +
Chr1	gffcl	locus	157556905	157557405	.	+	.	ID=RLOC_00012928;geneIDs=FBgn0023530.1.path1;transcripts=FBgn0023530.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157556905	157557405	.	+	.	ID=FBgn0023530.1.mrna1;geneID=FBgn0023530.1.path1;Name=FBgn0023530.1;Dir=sensecoverage=100.0;identity=99.8;matches=431;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012928
Chr1	stalkie_big_nohaplotig	exon	157556905	157557118	99	+	.	Parent=FBgn0023530.1.mrna1;Target=FBgn0023530.1 1 214 +
Chr1	stalkie_big_nohaplotig	exon	157557188	157557405	100	+	.	Parent=FBgn0023530.1.mrna1;Target=FBgn0023530.1 215 432 +
Chr1	stalkie_big_nohaplotig	CDS	157556905	157557118	.	+	0	Parent=FBgn0023530.1.mrna1;Target=FBgn0023530.1 1 214 +
Chr1	stalkie_big_nohaplotig	CDS	157557188	157557405	.	+	2	Parent=FBgn0023530.1.mrna1;Target=FBgn0023530.1 215 432 +
Chr1	gffcl	locus	157609857	157611158	.	-	.	ID=RLOC_00012929;geneIDs=comp142462_c0_seq1.path1;transcripts=comp142462_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157609857	157611158	.	-	.	ID=comp142462_c0_seq1.mrna1;geneID=comp142462_c0_seq1.path1;Name=comp142462_c0_seq1;Dir=sensecoverage=100.0;identity=98.6;matches=495;mismatches=2;indels=5;unknowns=0;Target=comp142462_c0_seq1 1 153 +;locus=RLOC_00012929
Chr1	stalkie_big_nohaplotig	exon	157609857	157610106	97	-	.	Parent=comp142462_c0_seq1.mrna1;Target=comp142462_c0_seq1 248 502 +
Chr1	stalkie_big_nohaplotig	exon	157610912	157611158	100	-	.	Parent=comp142462_c0_seq1.mrna1;Target=comp142462_c0_seq1 1 247 +
Chr1	stalkie_big_nohaplotig	CDS	157611006	157611158	.	-	0	Parent=comp142462_c0_seq1.mrna1
Chr1	gffcl	locus	157610114	157610528	.	+	.	ID=RLOC_00012930;geneIDs=comp117440_c0_seq1.path1;transcripts=comp117440_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157610114	157610528	.	+	.	ID=comp117440_c0_seq1.mrna1;geneID=comp117440_c0_seq1.path1;Name=comp117440_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.5;matches=415;mismatches=0;indels=2;unknowns=0;Target=comp117440_c0_seq1 417 1 .;CDS_Target=comp117440_c0_seq1 66 1 .;locus=RLOC_00012930
Chr1	stalkie_big_nohaplotig	exon	157610114	157610528	99	+	.	Parent=comp117440_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	157610114	157610179	.	+	0	Parent=comp117440_c0_seq1.mrna1
Chr1	gffcl	locus	157611715	157628486	.	+	.	ID=RLOC_00012931;geneIDs=FBgn0030574.1.path1;transcripts=FBgn0030574.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157611715	157628486	.	+	.	ID=FBgn0030574.1.mrna1;geneID=FBgn0030574.1.path1;Name=FBgn0030574.1;Dir=sensecoverage=100.0;identity=99.9;matches=1640;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012931
Chr1	stalkie_big_nohaplotig	exon	157611715	157611808	100	+	.	Parent=FBgn0030574.1.mrna1;Target=FBgn0030574.1 1 94 +
Chr1	stalkie_big_nohaplotig	exon	157612296	157612514	100	+	.	Parent=FBgn0030574.1.mrna1;Target=FBgn0030574.1 95 313 +
Chr1	stalkie_big_nohaplotig	exon	157622882	157622983	100	+	.	Parent=FBgn0030574.1.mrna1;Target=FBgn0030574.1 314 415 +
Chr1	stalkie_big_nohaplotig	exon	157625920	157626162	100	+	.	Parent=FBgn0030574.1.mrna1;Target=FBgn0030574.1 416 658 +
Chr1	stalkie_big_nohaplotig	exon	157626239	157626737	100	+	.	Parent=FBgn0030574.1.mrna1;Target=FBgn0030574.1 659 1157 +
Chr1	stalkie_big_nohaplotig	exon	157626917	157627013	100	+	.	Parent=FBgn0030574.1.mrna1;Target=FBgn0030574.1 1158 1254 +
Chr1	stalkie_big_nohaplotig	exon	157628034	157628352	99	+	.	Parent=FBgn0030574.1.mrna1;Target=FBgn0030574.1 1255 1573 +
Chr1	stalkie_big_nohaplotig	exon	157628419	157628486	100	+	.	Parent=FBgn0030574.1.mrna1;Target=FBgn0030574.1 1574 1641 +
Chr1	stalkie_big_nohaplotig	CDS	157611715	157611808	.	+	0	Parent=FBgn0030574.1.mrna1;Target=FBgn0030574.1 1 94 +
Chr1	stalkie_big_nohaplotig	CDS	157612296	157612514	.	+	2	Parent=FBgn0030574.1.mrna1;Target=FBgn0030574.1 95 313 +
Chr1	stalkie_big_nohaplotig	CDS	157622882	157622983	.	+	2	Parent=FBgn0030574.1.mrna1;Target=FBgn0030574.1 314 415 +
Chr1	stalkie_big_nohaplotig	CDS	157625920	157626162	.	+	2	Parent=FBgn0030574.1.mrna1;Target=FBgn0030574.1 416 658 +
Chr1	stalkie_big_nohaplotig	CDS	157626239	157626737	.	+	2	Parent=FBgn0030574.1.mrna1;Target=FBgn0030574.1 659 1157 +
Chr1	stalkie_big_nohaplotig	CDS	157626917	157627013	.	+	1	Parent=FBgn0030574.1.mrna1;Target=FBgn0030574.1 1158 1254 +
Chr1	stalkie_big_nohaplotig	CDS	157628034	157628352	.	+	0	Parent=FBgn0030574.1.mrna1;Target=FBgn0030574.1 1255 1573 +
Chr1	stalkie_big_nohaplotig	CDS	157628419	157628486	.	+	2	Parent=FBgn0030574.1.mrna1;Target=FBgn0030574.1 1574 1641 +
Chr1	gffcl	locus	157623263	157625295	.	+	.	ID=RLOC_00012932;geneIDs=comp161040_c0_seq1.path1;transcripts=comp161040_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157623263	157625295	.	+	.	ID=comp161040_c0_seq1.mrna1;geneID=comp161040_c0_seq1.path1;Name=comp161040_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.8;matches=2013;mismatches=12;indels=13;unknowns=0;Target=comp161040_c0_seq1 2034 5 .;CDS_Target=comp161040_c0_seq1 715 605 .;locus=RLOC_00012932
Chr1	stalkie_big_nohaplotig	exon	157623263	157625295	98	+	.	Parent=comp161040_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	157623866	157623976	.	+	0	Parent=comp161040_c0_seq1.mrna1
Chr1	gffcl	locus	157628871	157630614	.	+	.	ID=RLOC_00012933;geneIDs=comp154521_c0_seq1.path1,comp158699_c3_seq1.path1;transcripts=comp154521_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157629326	157630614	.	+	.	ID=comp154521_c0_seq1.mrna1;geneID=comp154521_c0_seq1.path1;Name=comp154521_c0_seq1;Dir=indeterminatecoverage=75.4;identity=98.7;matches=807;mismatches=10;indels=1;unknowns=0;Target=comp154521_c0_seq1 146 78 .;locus=RLOC_00012933
Chr1	stalkie_big_nohaplotig	exon	157629326	157630011	99	+	.	Parent=comp154521_c0_seq1.mrna1;Target=comp154521_c0_seq1 762 76 .
Chr1	stalkie_big_nohaplotig	exon	157630453	157630464	100	+	.	Parent=comp154521_c0_seq1.mrna1;Target=comp154521_c0_seq1 778 767 .
Chr1	stalkie_big_nohaplotig	exon	157630496	157630614	94	+	.	Parent=comp154521_c0_seq1.mrna1;Target=comp154521_c0_seq1 907 789 .
Chr1	stalkie_big_nohaplotig	CDS	157629328	157629396	.	+	0	Parent=comp154521_c0_seq1.mrna1
Chr1	gffcl	locus	157631866	157632400	.	-	.	ID=RLOC_00012934;geneIDs=FBgn0030573.1.path1;transcripts=FBgn0030573.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157631866	157632400	.	-	.	ID=FBgn0030573.1.mrna1;geneID=FBgn0030573.1.path1;Name=FBgn0030573.1;Dir=sensecoverage=100.0;identity=99.6;matches=469;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012934
Chr1	stalkie_big_nohaplotig	exon	157631866	157632103	99	-	.	Parent=FBgn0030573.1.mrna1;Target=FBgn0030573.1 234 471 +
Chr1	stalkie_big_nohaplotig	exon	157632168	157632400	100	-	.	Parent=FBgn0030573.1.mrna1;Target=FBgn0030573.1 1 233 +
Chr1	stalkie_big_nohaplotig	CDS	157631866	157632103	.	-	1	Parent=FBgn0030573.1.mrna1;Target=FBgn0030573.1 234 471 +
Chr1	stalkie_big_nohaplotig	CDS	157632168	157632400	.	-	0	Parent=FBgn0030573.1.mrna1;Target=FBgn0030573.1 1 233 +
Chr1	gffcl	locus	157633486	157634423	.	-	.	ID=RLOC_00012935;geneIDs=ORF3200.path1;transcripts=ORF3200.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157633486	157634423	.	-	.	ID=ORF3200.mrna1;geneID=ORF3200.path1;Name=ORF3200;Dir=sensecoverage=100.0;identity=99.9;matches=755;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012935
Chr1	stalkie_big_nohaplotig	exon	157633486	157633497	100	-	.	Parent=ORF3200.mrna1;Target=ORF3200 745 756 +
Chr1	stalkie_big_nohaplotig	exon	157633555	157633943	100	-	.	Parent=ORF3200.mrna1;Target=ORF3200 356 744 +
Chr1	stalkie_big_nohaplotig	exon	157634004	157634210	100	-	.	Parent=ORF3200.mrna1;Target=ORF3200 149 355 +
Chr1	stalkie_big_nohaplotig	exon	157634276	157634423	99	-	.	Parent=ORF3200.mrna1;Target=ORF3200 1 148 +
Chr1	stalkie_big_nohaplotig	CDS	157633486	157633497	.	-	0	Parent=ORF3200.mrna1;Target=ORF3200 745 756 +
Chr1	stalkie_big_nohaplotig	CDS	157633555	157633943	.	-	2	Parent=ORF3200.mrna1;Target=ORF3200 356 744 +
Chr1	stalkie_big_nohaplotig	CDS	157634004	157634210	.	-	2	Parent=ORF3200.mrna1;Target=ORF3200 149 355 +
Chr1	stalkie_big_nohaplotig	CDS	157634276	157634423	.	-	0	Parent=ORF3200.mrna1;Target=ORF3200 1 148 +
Chr1	gffcl	locus	157635786	157636964	.	+	.	ID=RLOC_00012936;geneIDs=FBgn0030571.1.path1;transcripts=FBgn0030571.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157635786	157636964	.	+	.	ID=FBgn0030571.1.mrna1;geneID=FBgn0030571.1.path1;Name=FBgn0030571.1;Dir=sensecoverage=100.0;identity=100.0;matches=657;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012936
Chr1	stalkie_big_nohaplotig	exon	157635786	157635833	100	+	.	Parent=FBgn0030571.1.mrna1;Target=FBgn0030571.1 1 48 +
Chr1	stalkie_big_nohaplotig	exon	157635889	157635968	100	+	.	Parent=FBgn0030571.1.mrna1;Target=FBgn0030571.1 49 128 +
Chr1	stalkie_big_nohaplotig	exon	157636069	157636189	100	+	.	Parent=FBgn0030571.1.mrna1;Target=FBgn0030571.1 129 249 +
Chr1	stalkie_big_nohaplotig	exon	157636253	157636345	100	+	.	Parent=FBgn0030571.1.mrna1;Target=FBgn0030571.1 250 342 +
Chr1	stalkie_big_nohaplotig	exon	157636650	157636964	100	+	.	Parent=FBgn0030571.1.mrna1;Target=FBgn0030571.1 343 657 +
Chr1	stalkie_big_nohaplotig	CDS	157635786	157635833	.	+	0	Parent=FBgn0030571.1.mrna1;Target=FBgn0030571.1 1 48 +
Chr1	stalkie_big_nohaplotig	CDS	157635889	157635968	.	+	0	Parent=FBgn0030571.1.mrna1;Target=FBgn0030571.1 49 128 +
Chr1	stalkie_big_nohaplotig	CDS	157636069	157636189	.	+	1	Parent=FBgn0030571.1.mrna1;Target=FBgn0030571.1 129 249 +
Chr1	stalkie_big_nohaplotig	CDS	157636253	157636345	.	+	0	Parent=FBgn0030571.1.mrna1;Target=FBgn0030571.1 250 342 +
Chr1	stalkie_big_nohaplotig	CDS	157636650	157636964	.	+	0	Parent=FBgn0030571.1.mrna1;Target=FBgn0030571.1 343 657 +
Chr1	gffcl	locus	157637175	157637851	.	-	.	ID=RLOC_00012937;geneIDs=FBgn0030572.1.path1;transcripts=FBgn0030572.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157637175	157637851	.	-	.	ID=FBgn0030572.1.mrna1;geneID=FBgn0030572.1.path1;Name=FBgn0030572.1;Dir=sensecoverage=100.0;identity=99.2;matches=506;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012937
Chr1	stalkie_big_nohaplotig	exon	157637175	157637343	98	-	.	Parent=FBgn0030572.1.mrna1;Target=FBgn0030572.1 342 510 +
Chr1	stalkie_big_nohaplotig	exon	157637412	157637606	99	-	.	Parent=FBgn0030572.1.mrna1;Target=FBgn0030572.1 147 341 +
Chr1	stalkie_big_nohaplotig	exon	157637706	157637851	99	-	.	Parent=FBgn0030572.1.mrna1;Target=FBgn0030572.1 1 146 +
Chr1	stalkie_big_nohaplotig	CDS	157637175	157637343	.	-	1	Parent=FBgn0030572.1.mrna1;Target=FBgn0030572.1 342 510 +
Chr1	stalkie_big_nohaplotig	CDS	157637412	157637606	.	-	1	Parent=FBgn0030572.1.mrna1;Target=FBgn0030572.1 147 341 +
Chr1	stalkie_big_nohaplotig	CDS	157637706	157637851	.	-	0	Parent=FBgn0030572.1.mrna1;Target=FBgn0030572.1 1 146 +
Chr1	gffcl	locus	157651740	157662627	.	-	.	ID=RLOC_00012938;geneIDs=comp152531_c2_seq1.path1;transcripts=comp152531_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157651740	157662627	.	-	.	ID=comp152531_c2_seq1.mrna1;geneID=comp152531_c2_seq1.path1;Name=comp152531_c2_seq1;Dir=antisensecoverage=97.6;identity=94.2;matches=922;mismatches=32;indels=25;unknowns=0;locus=RLOC_00012938
Chr1	stalkie_big_nohaplotig	exon	157651740	157651899	98	-	.	Parent=comp152531_c2_seq1.mrna1;Target=comp152531_c2_seq1 24 183 -
Chr1	stalkie_big_nohaplotig	exon	157651963	157652132	90	-	.	Parent=comp152531_c2_seq1.mrna1;Target=comp152531_c2_seq1 184 358 -
Chr1	stalkie_big_nohaplotig	exon	157656465	157656789	100	-	.	Parent=comp152531_c2_seq1.mrna1;Target=comp152531_c2_seq1 359 683 -
Chr1	stalkie_big_nohaplotig	exon	157662241	157662340	92	-	.	Parent=comp152531_c2_seq1.mrna1;Target=comp152531_c2_seq1 684 785 -
Chr1	stalkie_big_nohaplotig	exon	157662413	157662585	84	-	.	Parent=comp152531_c2_seq1.mrna1;Target=comp152531_c2_seq1 786 974 -
Chr1	stalkie_big_nohaplotig	exon	157662601	157662627	96	-	.	Parent=comp152531_c2_seq1.mrna1;Target=comp152531_c2_seq1 975 1001 -
Chr1	stalkie_big_nohaplotig	CDS	157662496	157662585	.	-	2	Parent=comp152531_c2_seq1.mrna1;Target=comp152531_c2_seq1 886 974 .
Chr1	stalkie_big_nohaplotig	CDS	157662601	157662625	.	-	0	Parent=comp152531_c2_seq1.mrna1;Target=comp152531_c2_seq1 975 999 .
Chr1	gffcl	locus	157655015	157655949	.	-	.	ID=RLOC_00012939;geneIDs=comp147874_c0_seq1.path1;transcripts=comp147874_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157655015	157655949	.	-	.	ID=comp147874_c0_seq1.mrna1;geneID=comp147874_c0_seq1.path1;Name=comp147874_c0_seq1;Dir=indeterminatecoverage=97.7;identity=99.9;matches=934;mismatches=1;indels=0;unknowns=0;Target=comp147874_c0_seq1 938 4 .;CDS_Target=comp147874_c0_seq1 729 178 .;locus=RLOC_00012939
Chr1	stalkie_big_nohaplotig	exon	157655015	157655949	99	-	.	Parent=comp147874_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	157655224	157655775	.	-	0	Parent=comp147874_c0_seq1.mrna1
Chr1	gffcl	locus	157688496	157689191	.	+	.	ID=RLOC_00012940;geneIDs=comp134271_c0_seq1.path1;transcripts=comp134271_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157688496	157689191	.	+	.	ID=comp134271_c0_seq1.mrna1;geneID=comp134271_c0_seq1.path1;Name=comp134271_c0_seq1;Dir=antisensecoverage=99.6;identity=99.8;matches=559;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012940
Chr1	stalkie_big_nohaplotig	exon	157688496	157688583	100	+	.	Parent=comp134271_c0_seq1.mrna1;Target=comp134271_c0_seq1 474 561 -
Chr1	stalkie_big_nohaplotig	exon	157688655	157688900	100	+	.	Parent=comp134271_c0_seq1.mrna1;Target=comp134271_c0_seq1 228 473 -
Chr1	stalkie_big_nohaplotig	exon	157688966	157689191	99	+	.	Parent=comp134271_c0_seq1.mrna1;Target=comp134271_c0_seq1 2 227 -
Chr1	stalkie_big_nohaplotig	CDS	157688659	157688900	.	+	0	Parent=comp134271_c0_seq1.mrna1;Target=comp134271_c0_seq1 228 469 .
Chr1	stalkie_big_nohaplotig	CDS	157688966	157689062	.	+	1	Parent=comp134271_c0_seq1.mrna1;Target=comp134271_c0_seq1 131 227 .
Chr1	gffcl	locus	157725901	159601019	.	-	.	ID=RLOC_00012941;geneIDs=FBgn0004047.1.path1,comp119099_c0_seq1.path1,comp154699_c2_seq1.path1;transcripts=comp154699_c2_seq1.mrna1,comp119099_c0_seq1.mrna1,FBgn0004047.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157725901	159600099	.	-	.	ID=comp154699_c2_seq1.mrna1;geneID=comp154699_c2_seq1.path1;Name=comp154699_c2_seq1;Dir=indeterminatecoverage=77.2;identity=97.0;matches=829;mismatches=18;indels=8;unknowns=0;Target=comp154699_c2_seq1 542 3 .;locus=RLOC_00012941
Chr1	stalkie_big_nohaplotig	exon	157725901	157725904	75	-	.	Parent=comp154699_c2_seq1.mrna1;Target=comp154699_c2_seq1 852 849 .
Chr1	stalkie_big_nohaplotig	exon	157728456	157728469	71	-	.	Parent=comp154699_c2_seq1.mrna1;Target=comp154699_c2_seq1 848 835 .
Chr1	stalkie_big_nohaplotig	exon	157737863	157737869	100	-	.	Parent=comp154699_c2_seq1.mrna1;Target=comp154699_c2_seq1 834 828 .
Chr1	stalkie_big_nohaplotig	exon	157741645	157741649	100	-	.	Parent=comp154699_c2_seq1.mrna1;Target=comp154699_c2_seq1 827 823 .
Chr1	stalkie_big_nohaplotig	exon	157749586	157749591	100	-	.	Parent=comp154699_c2_seq1.mrna1;Target=comp154699_c2_seq1 822 817 .
Chr1	stalkie_big_nohaplotig	exon	157755966	157755980	86	-	.	Parent=comp154699_c2_seq1.mrna1;Target=comp154699_c2_seq1 816 802 .
Chr1	stalkie_big_nohaplotig	exon	157757313	157757344	54	-	.	Parent=comp154699_c2_seq1.mrna1;Target=comp154699_c2_seq1 801 768 .
Chr1	stalkie_big_nohaplotig	exon	157763968	157763975	100	-	.	Parent=comp154699_c2_seq1.mrna1;Target=comp154699_c2_seq1 767 760 .
Chr1	stalkie_big_nohaplotig	exon	157764834	157764836	100	-	.	Parent=comp154699_c2_seq1.mrna1;Target=comp154699_c2_seq1 759 757 .
Chr1	stalkie_big_nohaplotig	exon	157772861	157772867	100	-	.	Parent=comp154699_c2_seq1.mrna1;Target=comp154699_c2_seq1 756 750 .
Chr1	stalkie_big_nohaplotig	exon	157785383	157785391	100	-	.	Parent=comp154699_c2_seq1.mrna1;Target=comp154699_c2_seq1 749 741 .
Chr1	stalkie_big_nohaplotig	exon	157800400	157800402	100	-	.	Parent=comp154699_c2_seq1.mrna1;Target=comp154699_c2_seq1 740 738 .
Chr1	stalkie_big_nohaplotig	exon	157805887	157805893	100	-	.	Parent=comp154699_c2_seq1.mrna1;Target=comp154699_c2_seq1 737 731 .
Chr1	stalkie_big_nohaplotig	exon	157811510	157811513	100	-	.	Parent=comp154699_c2_seq1.mrna1;Target=comp154699_c2_seq1 730 727 .
Chr1	stalkie_big_nohaplotig	exon	157818391	157818401	100	-	.	Parent=comp154699_c2_seq1.mrna1;Target=comp154699_c2_seq1 726 716 .
Chr1	stalkie_big_nohaplotig	exon	157830808	157830811	100	-	.	Parent=comp154699_c2_seq1.mrna1;Target=comp154699_c2_seq1 715 712 .
Chr1	stalkie_big_nohaplotig	exon	157838639	157838640	100	-	.	Parent=comp154699_c2_seq1.mrna1;Target=comp154699_c2_seq1 711 710 .
Chr1	stalkie_big_nohaplotig	exon	157842045	157842047	100	-	.	Parent=comp154699_c2_seq1.mrna1;Target=comp154699_c2_seq1 709 707 .
Chr1	stalkie_big_nohaplotig	exon	159599394	159600099	99	-	.	Parent=comp154699_c2_seq1.mrna1;Target=comp154699_c2_seq1 706 1 .
Chr1	stalkie_big_nohaplotig	CDS	159599558	159600097	.	-	0	Parent=comp154699_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159599078	159599404	.	-	.	ID=comp119099_c0_seq1.mrna1;geneID=comp119099_c0_seq1.path1;Name=comp119099_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.2;matches=322;mismatches=5;indels=1;unknowns=0;Target=comp119099_c0_seq1 328 1 .;CDS_Target=comp119099_c0_seq1 58 2 .;locus=RLOC_00012941
Chr1	stalkie_big_nohaplotig	exon	159599078	159599404	98	-	.	Parent=comp119099_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159599348	159599403	.	-	0	Parent=comp119099_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159600080	159601019	.	-	.	ID=FBgn0004047.1.mrna1;geneID=FBgn0004047.1.path1;Name=FBgn0004047.1;Dir=sensecoverage=100.0;identity=99.5;matches=794;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012941
Chr1	stalkie_big_nohaplotig	exon	159600080	159600247	99	-	.	Parent=FBgn0004047.1.mrna1;Target=FBgn0004047.1 631 798 +
Chr1	stalkie_big_nohaplotig	exon	159600328	159600692	99	-	.	Parent=FBgn0004047.1.mrna1;Target=FBgn0004047.1 266 630 +
Chr1	stalkie_big_nohaplotig	exon	159600755	159601019	100	-	.	Parent=FBgn0004047.1.mrna1;Target=FBgn0004047.1 1 265 +
Chr1	stalkie_big_nohaplotig	CDS	159600080	159600247	.	-	0	Parent=FBgn0004047.1.mrna1;Target=FBgn0004047.1 631 798 +
Chr1	stalkie_big_nohaplotig	CDS	159600328	159600692	.	-	2	Parent=FBgn0004047.1.mrna1;Target=FBgn0004047.1 266 630 +
Chr1	stalkie_big_nohaplotig	CDS	159600755	159601019	.	-	0	Parent=FBgn0004047.1.mrna1;Target=FBgn0004047.1 1 265 +
Chr1	gffcl	locus	157799273	157799589	.	-	.	ID=RLOC_00012942;geneIDs=comp117317_c0_seq1.path1;transcripts=comp117317_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157799273	157799589	.	-	.	ID=comp117317_c0_seq1.mrna1;geneID=comp117317_c0_seq1.path1;Name=comp117317_c0_seq1;Dir=indeterminatecoverage=88.5;identity=99.4;matches=315;mismatches=0;indels=2;unknowns=0;Target=comp117317_c0_seq1 315 1 .;CDS_Target=comp117317_c0_seq1 37 2 .;locus=RLOC_00012942
Chr1	stalkie_big_nohaplotig	exon	157799273	157799589	99	-	.	Parent=comp117317_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	157799551	157799588	.	-	0	Parent=comp117317_c0_seq1.mrna1
Chr1	gffcl	locus	157878267	157883364	.	+	.	ID=RLOC_00012944;geneIDs=comp149161_c0_seq1.path1;transcripts=comp149161_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157878267	157883364	.	+	.	ID=comp149161_c0_seq1.mrna1;geneID=comp149161_c0_seq1.path1;Name=comp149161_c0_seq1;Dir=antisensecoverage=99.2;identity=97.7;matches=688;mismatches=13;indels=3;unknowns=0;locus=RLOC_00012944
Chr1	stalkie_big_nohaplotig	exon	157878267	157878394	100	+	.	Parent=comp149161_c0_seq1.mrna1;Target=comp149161_c0_seq1 580 707 -
Chr1	stalkie_big_nohaplotig	exon	157882735	157882828	98	+	.	Parent=comp149161_c0_seq1.mrna1;Target=comp149161_c0_seq1 486 579 -
Chr1	stalkie_big_nohaplotig	exon	157882883	157883364	96	+	.	Parent=comp149161_c0_seq1.mrna1;Target=comp149161_c0_seq1 7 485 -
Chr1	stalkie_big_nohaplotig	CDS	157878384	157878394	.	+	0	Parent=comp149161_c0_seq1.mrna1;Target=comp149161_c0_seq1 580 590 .
Chr1	stalkie_big_nohaplotig	CDS	157882735	157882828	.	+	1	Parent=comp149161_c0_seq1.mrna1;Target=comp149161_c0_seq1 486 579 .
Chr1	stalkie_big_nohaplotig	CDS	157882883	157883179	.	+	0	Parent=comp149161_c0_seq1.mrna1;Target=comp149161_c0_seq1 189 485 .
Chr1	gffcl	locus	157909951	157920909	.	+	.	ID=RLOC_00012945;geneIDs=FBgn0052600.1.path2;transcripts=FBgn0052600.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	157909951	157920909	.	+	.	ID=FBgn0052600.1.mrna2;geneID=FBgn0052600.1.path2;Name=FBgn0052600.1;Dir=sensecoverage=55.1;identity=100.0;matches=539;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012945
Chr1	stalkie_big_nohaplotig	exon	157909951	157910078	100	+	.	Parent=FBgn0052600.1.mrna2;Target=FBgn0052600.1 440 567 +
Chr1	stalkie_big_nohaplotig	exon	157911309	157911477	100	+	.	Parent=FBgn0052600.1.mrna2;Target=FBgn0052600.1 568 736 +
Chr1	stalkie_big_nohaplotig	exon	157920668	157920909	100	+	.	Parent=FBgn0052600.1.mrna2;Target=FBgn0052600.1 737 978 +
Chr1	stalkie_big_nohaplotig	CDS	157909951	157910078	.	+	1	Parent=FBgn0052600.1.mrna2;Target=FBgn0052600.1 440 567 +
Chr1	stalkie_big_nohaplotig	CDS	157911309	157911477	.	+	2	Parent=FBgn0052600.1.mrna2;Target=FBgn0052600.1 568 736 +
Chr1	stalkie_big_nohaplotig	CDS	157920668	157920909	.	+	1	Parent=FBgn0052600.1.mrna2;Target=FBgn0052600.1 737 978 +
Chr1	gffcl	locus	157921920	157923326	.	+	.	ID=RLOC_00012946;geneIDs=comp159390_c0_seq1.path1;transcripts=comp159390_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157921920	157923326	.	+	.	ID=comp159390_c0_seq1.mrna1;geneID=comp159390_c0_seq1.path1;Name=comp159390_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.2;matches=1392;mismatches=14;indels=41;unknowns=0;Target=comp159390_c0_seq1 1446 1 .;CDS_Target=comp159390_c0_seq1 574 494 .;locus=RLOC_00012946
Chr1	stalkie_big_nohaplotig	exon	157921920	157923326	96	+	.	Parent=comp159390_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	157922413	157922493	.	+	0	Parent=comp159390_c0_seq1.mrna1
Chr1	gffcl	locus	157932846	157934261	.	-	.	ID=RLOC_00012948;geneIDs=ORF1667.path1;transcripts=ORF1667.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157932846	157934261	.	-	.	ID=ORF1667.mrna1;geneID=ORF1667.path1;Name=ORF1667;Dir=sensecoverage=100.0;identity=98.8;matches=1020;mismatches=12;indels=0;unknowns=0;locus=RLOC_00012948
Chr1	stalkie_big_nohaplotig	exon	157932846	157933261	99	-	.	Parent=ORF1667.mrna1;Target=ORF1667 617 1032 +
Chr1	stalkie_big_nohaplotig	exon	157933322	157933492	99	-	.	Parent=ORF1667.mrna1;Target=ORF1667 446 616 +
Chr1	stalkie_big_nohaplotig	exon	157933552	157933629	96	-	.	Parent=ORF1667.mrna1;Target=ORF1667 368 445 +
Chr1	stalkie_big_nohaplotig	exon	157933707	157933763	100	-	.	Parent=ORF1667.mrna1;Target=ORF1667 311 367 +
Chr1	stalkie_big_nohaplotig	exon	157933825	157933905	96	-	.	Parent=ORF1667.mrna1;Target=ORF1667 230 310 +
Chr1	stalkie_big_nohaplotig	exon	157933973	157934071	97	-	.	Parent=ORF1667.mrna1;Target=ORF1667 131 229 +
Chr1	stalkie_big_nohaplotig	exon	157934132	157934261	99	-	.	Parent=ORF1667.mrna1;Target=ORF1667 1 130 +
Chr1	stalkie_big_nohaplotig	CDS	157932846	157933261	.	-	2	Parent=ORF1667.mrna1;Target=ORF1667 617 1032 +
Chr1	stalkie_big_nohaplotig	CDS	157933322	157933492	.	-	2	Parent=ORF1667.mrna1;Target=ORF1667 446 616 +
Chr1	stalkie_big_nohaplotig	CDS	157933552	157933629	.	-	2	Parent=ORF1667.mrna1;Target=ORF1667 368 445 +
Chr1	stalkie_big_nohaplotig	CDS	157933707	157933763	.	-	2	Parent=ORF1667.mrna1;Target=ORF1667 311 367 +
Chr1	stalkie_big_nohaplotig	CDS	157933825	157933905	.	-	2	Parent=ORF1667.mrna1;Target=ORF1667 230 310 +
Chr1	stalkie_big_nohaplotig	CDS	157933973	157934071	.	-	2	Parent=ORF1667.mrna1;Target=ORF1667 131 229 +
Chr1	stalkie_big_nohaplotig	CDS	157934132	157934261	.	-	0	Parent=ORF1667.mrna1;Target=ORF1667 1 130 +
Chr1	gffcl	locus	157938596	157939398	.	-	.	ID=RLOC_00012949;geneIDs=ORF2779.path1;transcripts=ORF2779.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157938596	157939398	.	-	.	ID=ORF2779.mrna1;geneID=ORF2779.path1;Name=ORF2779;Dir=indeterminatecoverage=99.9;identity=99.1;matches=799;mismatches=4;indels=3;unknowns=0;Target=ORF2779 807 2 .;CDS_Target=ORF2779 807 4 .;locus=RLOC_00012949
Chr1	stalkie_big_nohaplotig	exon	157938596	157939398	99	-	.	Parent=ORF2779.mrna1
Chr1	stalkie_big_nohaplotig	CDS	157938596	157939396	.	-	0	Parent=ORF2779.mrna1
Chr1	gffcl	locus	157941295	157942092	.	+	.	ID=RLOC_00012950;geneIDs=FBgn0020508.2.path1;transcripts=FBgn0020508.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157941295	157942092	.	+	.	ID=FBgn0020508.2.mrna1;geneID=FBgn0020508.2.path1;Name=FBgn0020508.2;Dir=sensecoverage=100.0;identity=99.5;matches=657;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012950
Chr1	stalkie_big_nohaplotig	exon	157941295	157941426	100	+	.	Parent=FBgn0020508.2.mrna1;Target=FBgn0020508.2 1 132 +
Chr1	stalkie_big_nohaplotig	exon	157941497	157941891	99	+	.	Parent=FBgn0020508.2.mrna1;Target=FBgn0020508.2 133 527 +
Chr1	stalkie_big_nohaplotig	exon	157941960	157942092	98	+	.	Parent=FBgn0020508.2.mrna1;Target=FBgn0020508.2 528 660 +
Chr1	stalkie_big_nohaplotig	CDS	157941295	157941426	.	+	0	Parent=FBgn0020508.2.mrna1;Target=FBgn0020508.2 1 132 +
Chr1	stalkie_big_nohaplotig	CDS	157941497	157941891	.	+	0	Parent=FBgn0020508.2.mrna1;Target=FBgn0020508.2 133 527 +
Chr1	stalkie_big_nohaplotig	CDS	157941960	157942092	.	+	1	Parent=FBgn0020508.2.mrna1;Target=FBgn0020508.2 528 660 +
Chr1	gffcl	locus	157948146	157949099	.	-	.	ID=RLOC_00012952;geneIDs=FBgn0020508.4.path1;transcripts=FBgn0020508.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157948146	157949099	.	-	.	ID=FBgn0020508.4.mrna1;geneID=FBgn0020508.4.path1;Name=FBgn0020508.4;Dir=sensecoverage=100.0;identity=100.0;matches=777;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012952
Chr1	stalkie_big_nohaplotig	exon	157948146	157948386	100	-	.	Parent=FBgn0020508.4.mrna1;Target=FBgn0020508.4 537 777 +
Chr1	stalkie_big_nohaplotig	exon	157948445	157948839	100	-	.	Parent=FBgn0020508.4.mrna1;Target=FBgn0020508.4 142 536 +
Chr1	stalkie_big_nohaplotig	exon	157948959	157949099	100	-	.	Parent=FBgn0020508.4.mrna1;Target=FBgn0020508.4 1 141 +
Chr1	stalkie_big_nohaplotig	CDS	157948146	157948386	.	-	1	Parent=FBgn0020508.4.mrna1;Target=FBgn0020508.4 537 777 +
Chr1	stalkie_big_nohaplotig	CDS	157948445	157948839	.	-	0	Parent=FBgn0020508.4.mrna1;Target=FBgn0020508.4 142 536 +
Chr1	stalkie_big_nohaplotig	CDS	157948959	157949099	.	-	0	Parent=FBgn0020508.4.mrna1;Target=FBgn0020508.4 1 141 +
Chr1	gffcl	locus	157950702	157960985	.	-	.	ID=RLOC_00012953;geneIDs=FBgn0030562.1.path1;transcripts=FBgn0030562.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157950702	157960985	.	-	.	ID=FBgn0030562.1.mrna1;geneID=FBgn0030562.1.path1;Name=FBgn0030562.1;Dir=sensecoverage=100.0;identity=99.3;matches=1049;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012953
Chr1	stalkie_big_nohaplotig	exon	157950702	157951002	98	-	.	Parent=FBgn0030562.1.mrna1;Target=FBgn0030562.1 756 1056 +
Chr1	stalkie_big_nohaplotig	exon	157960231	157960985	99	-	.	Parent=FBgn0030562.1.mrna1;Target=FBgn0030562.1 1 755 +
Chr1	stalkie_big_nohaplotig	CDS	157950702	157951002	.	-	1	Parent=FBgn0030562.1.mrna1;Target=FBgn0030562.1 756 1056 +
Chr1	stalkie_big_nohaplotig	CDS	157960231	157960985	.	-	0	Parent=FBgn0030562.1.mrna1;Target=FBgn0030562.1 1 755 +
Chr1	gffcl	locus	157978636	157978863	.	-	.	ID=RLOC_00012954;geneIDs=comp152806_c1_seq1.path2;transcripts=comp152806_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	157978636	157978863	.	-	.	ID=comp152806_c1_seq1.mrna2;geneID=comp152806_c1_seq1.path2;Name=comp152806_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=226;mismatches=2;indels=0;unknowns=0;Target=comp152806_c1_seq1 228 1 .;locus=RLOC_00012954
Chr1	stalkie_big_nohaplotig	exon	157978636	157978863	99	-	.	Parent=comp152806_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	157978636	157978863	.	-	0	Parent=comp152806_c1_seq1.mrna2
Chr1	gffcl	locus	157985405	157986073	.	+	.	ID=RLOC_00012955;geneIDs=comp134682_c0_seq1.path1;transcripts=comp134682_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	157985405	157986073	.	+	.	ID=comp134682_c0_seq1.mrna1;geneID=comp134682_c0_seq1.path1;Name=comp134682_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=669;mismatches=0;indels=0;unknowns=0;Target=comp134682_c0_seq1 669 1 .;CDS_Target=comp134682_c0_seq1 100 2 .;locus=RLOC_00012955
Chr1	stalkie_big_nohaplotig	exon	157985405	157986073	100	+	.	Parent=comp134682_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	157985406	157985504	.	+	0	Parent=comp134682_c0_seq1.mrna1
Chr1	gffcl	locus	157999915	158000712	.	-	.	ID=RLOC_00012958;geneIDs=FBgn0020508.2.path2;transcripts=FBgn0020508.2.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	157999915	158000712	.	-	.	ID=FBgn0020508.2.mrna2;geneID=FBgn0020508.2.path2;Name=FBgn0020508.2;Dir=sensecoverage=100.0;identity=99.5;matches=657;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012958
Chr1	stalkie_big_nohaplotig	exon	157999915	158000047	98	-	.	Parent=FBgn0020508.2.mrna2;Target=FBgn0020508.2 528 660 +
Chr1	stalkie_big_nohaplotig	exon	158000116	158000510	99	-	.	Parent=FBgn0020508.2.mrna2;Target=FBgn0020508.2 133 527 +
Chr1	stalkie_big_nohaplotig	exon	158000581	158000712	100	-	.	Parent=FBgn0020508.2.mrna2;Target=FBgn0020508.2 1 132 +
Chr1	stalkie_big_nohaplotig	CDS	157999915	158000047	.	-	1	Parent=FBgn0020508.2.mrna2;Target=FBgn0020508.2 528 660 +
Chr1	stalkie_big_nohaplotig	CDS	158000116	158000510	.	-	0	Parent=FBgn0020508.2.mrna2;Target=FBgn0020508.2 133 527 +
Chr1	stalkie_big_nohaplotig	CDS	158000581	158000712	.	-	0	Parent=FBgn0020508.2.mrna2;Target=FBgn0020508.2 1 132 +
Chr1	gffcl	locus	158005378	158005605	.	+	.	ID=RLOC_00012959;geneIDs=comp152806_c1_seq1.path1;transcripts=comp152806_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158005378	158005605	.	+	.	ID=comp152806_c1_seq1.mrna1;geneID=comp152806_c1_seq1.path1;Name=comp152806_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=227;mismatches=1;indels=0;unknowns=0;Target=comp152806_c1_seq1 228 1 .;locus=RLOC_00012959
Chr1	stalkie_big_nohaplotig	exon	158005378	158005605	99	+	.	Parent=comp152806_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	158005378	158005605	.	+	0	Parent=comp152806_c1_seq1.mrna1
Chr1	gffcl	locus	158020752	158067381	.	+	.	ID=RLOC_00012960;geneIDs=FBgn0052600.1.path1;transcripts=FBgn0052600.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158020752	158067381	.	+	.	ID=FBgn0052600.1.mrna1;geneID=FBgn0052600.1.path1;Name=FBgn0052600.1;Dir=sensecoverage=39.1;identity=99.7;matches=381;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012960
Chr1	stalkie_big_nohaplotig	exon	158020752	158020922	100	+	.	Parent=FBgn0052600.1.mrna1;Target=FBgn0052600.1 58 228 +
Chr1	stalkie_big_nohaplotig	exon	158067171	158067381	99	+	.	Parent=FBgn0052600.1.mrna1;Target=FBgn0052600.1 229 439 +
Chr1	stalkie_big_nohaplotig	CDS	158020752	158020922	.	+	0	Parent=FBgn0052600.1.mrna1;Target=FBgn0052600.1 58 228 +
Chr1	stalkie_big_nohaplotig	CDS	158067171	158067381	.	+	0	Parent=FBgn0052600.1.mrna1;Target=FBgn0052600.1 229 439 +
Chr1	gffcl	locus	158056151	158057686	.	+	.	ID=RLOC_00012961;geneIDs=comp158809_c0_seq1.path1;transcripts=comp158809_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158056151	158057686	.	+	.	ID=comp158809_c0_seq1.mrna1;geneID=comp158809_c0_seq1.path1;Name=comp158809_c0_seq1;Dir=indeterminatecoverage=99.0;identity=95.5;matches=1525;mismatches=11;indels=61;unknowns=0;Target=comp158809_c0_seq1 1597 1 .;CDS_Target=comp158809_c0_seq1 794 399 .;locus=RLOC_00012961
Chr1	stalkie_big_nohaplotig	exon	158056151	158057686	95	+	.	Parent=comp158809_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	158056549	158056944	.	+	0	Parent=comp158809_c0_seq1.mrna1
Chr1	gffcl	locus	158100264	158101342	.	+	.	ID=RLOC_00012963;geneIDs=comp148889_c0_seq1.path1;transcripts=comp148889_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158100264	158101342	.	+	.	ID=comp148889_c0_seq1.mrna1;geneID=comp148889_c0_seq1.path1;Name=comp148889_c0_seq1;Dir=indeterminatecoverage=88.1;identity=99.7;matches=1076;mismatches=3;indels=0;unknowns=0;Target=comp148889_c0_seq1 1217 139 .;CDS_Target=comp148889_c0_seq1 1061 786 .;locus=RLOC_00012963
Chr1	stalkie_big_nohaplotig	exon	158100264	158101342	99	+	.	Parent=comp148889_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	158100911	158101186	.	+	0	Parent=comp148889_c0_seq1.mrna1
Chr1	gffcl	locus	158124248	158125807	.	+	.	ID=RLOC_00012964;geneIDs=ORF1306.path1;transcripts=ORF1306.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158124248	158125807	.	+	.	ID=ORF1306.mrna1;geneID=ORF1306.path1;Name=ORF1306;Dir=sensecoverage=100.0;identity=99.9;matches=1145;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012964
Chr1	stalkie_big_nohaplotig	exon	158124248	158124356	100	+	.	Parent=ORF1306.mrna1;Target=ORF1306 1 109 +
Chr1	stalkie_big_nohaplotig	exon	158124433	158124522	100	+	.	Parent=ORF1306.mrna1;Target=ORF1306 110 199 +
Chr1	stalkie_big_nohaplotig	exon	158124603	158124671	100	+	.	Parent=ORF1306.mrna1;Target=ORF1306 200 268 +
Chr1	stalkie_big_nohaplotig	exon	158124728	158124793	100	+	.	Parent=ORF1306.mrna1;Target=ORF1306 269 334 +
Chr1	stalkie_big_nohaplotig	exon	158124854	158124916	100	+	.	Parent=ORF1306.mrna1;Target=ORF1306 335 397 +
Chr1	stalkie_big_nohaplotig	exon	158124991	158125266	100	+	.	Parent=ORF1306.mrna1;Target=ORF1306 398 673 +
Chr1	stalkie_big_nohaplotig	exon	158125335	158125807	99	+	.	Parent=ORF1306.mrna1;Target=ORF1306 674 1146 +
Chr1	stalkie_big_nohaplotig	CDS	158124248	158124356	.	+	0	Parent=ORF1306.mrna1;Target=ORF1306 1 109 +
Chr1	stalkie_big_nohaplotig	CDS	158124433	158124522	.	+	2	Parent=ORF1306.mrna1;Target=ORF1306 110 199 +
Chr1	stalkie_big_nohaplotig	CDS	158124603	158124671	.	+	2	Parent=ORF1306.mrna1;Target=ORF1306 200 268 +
Chr1	stalkie_big_nohaplotig	CDS	158124728	158124793	.	+	2	Parent=ORF1306.mrna1;Target=ORF1306 269 334 +
Chr1	stalkie_big_nohaplotig	CDS	158124854	158124916	.	+	2	Parent=ORF1306.mrna1;Target=ORF1306 335 397 +
Chr1	stalkie_big_nohaplotig	CDS	158124991	158125266	.	+	2	Parent=ORF1306.mrna1;Target=ORF1306 398 673 +
Chr1	stalkie_big_nohaplotig	CDS	158125335	158125807	.	+	2	Parent=ORF1306.mrna1;Target=ORF1306 674 1146 +
Chr1	gffcl	locus	158331390	158333882	.	+	.	ID=RLOC_00012965;geneIDs=FBgn0036697.1.path1;transcripts=FBgn0036697.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158331390	158333882	.	+	.	ID=FBgn0036697.1.mrna1;geneID=FBgn0036697.1.path1;Name=FBgn0036697.1;Dir=sensecoverage=100.0;identity=99.9;matches=785;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012965
Chr1	stalkie_big_nohaplotig	exon	158331390	158331452	98	+	.	Parent=FBgn0036697.1.mrna1;Target=FBgn0036697.1 1 63 +
Chr1	stalkie_big_nohaplotig	exon	158331800	158331871	100	+	.	Parent=FBgn0036697.1.mrna1;Target=FBgn0036697.1 64 135 +
Chr1	stalkie_big_nohaplotig	exon	158331932	158332063	100	+	.	Parent=FBgn0036697.1.mrna1;Target=FBgn0036697.1 136 267 +
Chr1	stalkie_big_nohaplotig	exon	158332127	158332284	100	+	.	Parent=FBgn0036697.1.mrna1;Target=FBgn0036697.1 268 425 +
Chr1	stalkie_big_nohaplotig	exon	158333454	158333574	100	+	.	Parent=FBgn0036697.1.mrna1;Target=FBgn0036697.1 426 546 +
Chr1	stalkie_big_nohaplotig	exon	158333643	158333882	100	+	.	Parent=FBgn0036697.1.mrna1;Target=FBgn0036697.1 547 786 +
Chr1	stalkie_big_nohaplotig	CDS	158331390	158331452	.	+	0	Parent=FBgn0036697.1.mrna1;Target=FBgn0036697.1 1 63 +
Chr1	stalkie_big_nohaplotig	CDS	158331800	158331871	.	+	0	Parent=FBgn0036697.1.mrna1;Target=FBgn0036697.1 64 135 +
Chr1	stalkie_big_nohaplotig	CDS	158331932	158332063	.	+	0	Parent=FBgn0036697.1.mrna1;Target=FBgn0036697.1 136 267 +
Chr1	stalkie_big_nohaplotig	CDS	158332127	158332284	.	+	0	Parent=FBgn0036697.1.mrna1;Target=FBgn0036697.1 268 425 +
Chr1	stalkie_big_nohaplotig	CDS	158333454	158333574	.	+	1	Parent=FBgn0036697.1.mrna1;Target=FBgn0036697.1 426 546 +
Chr1	stalkie_big_nohaplotig	CDS	158333643	158333882	.	+	0	Parent=FBgn0036697.1.mrna1;Target=FBgn0036697.1 547 786 +
Chr1	gffcl	locus	158332261	158333298	.	.	.	ID=RLOC_00012966;geneIDs=comp137830_c0_seq1.path1,comp156340_c0_seq1.path1;transcripts=comp156340_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158332261	158332995	.	-	.	ID=comp156340_c0_seq1.mrna1;geneID=comp156340_c0_seq1.path1;Name=comp156340_c0_seq1;Dir=antisensecoverage=99.6;identity=97.5;matches=655;mismatches=13;indels=4;unknowns=0;Target=comp156340_c0_seq1 71 181 .;locus=RLOC_00012966
Chr1	stalkie_big_nohaplotig	exon	158332261	158332793	98	-	.	Parent=comp156340_c0_seq1.mrna1;Target=comp156340_c0_seq1 1 533 -
Chr1	stalkie_big_nohaplotig	exon	158332861	158332995	93	-	.	Parent=comp156340_c0_seq1.mrna1;Target=comp156340_c0_seq1 534 672 -
Chr1	stalkie_big_nohaplotig	CDS	158332331	158332441	.	-	0	Parent=comp156340_c0_seq1.mrna1
Chr1	gffcl	locus	158334669	158338731	.	.	.	ID=RLOC_00012967;geneIDs=FBgn0030737.2.path1,comp153723_c0_seq1.path1;transcripts=FBgn0030737.2.mrna1,comp153723_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158334669	158338731	.	-	.	ID=FBgn0030737.2.mrna1;geneID=FBgn0030737.2.path1;Name=FBgn0030737.2;Dir=sensecoverage=100.0;identity=99.8;matches=997;mismatches=2;indels=0;unknowns=0;locus=RLOC_00012967
Chr1	stalkie_big_nohaplotig	exon	158334669	158334802	100	-	.	Parent=FBgn0030737.2.mrna1;Target=FBgn0030737.2 866 999 +
Chr1	stalkie_big_nohaplotig	exon	158334871	158335270	100	-	.	Parent=FBgn0030737.2.mrna1;Target=FBgn0030737.2 466 865 +
Chr1	stalkie_big_nohaplotig	exon	158338166	158338544	99	-	.	Parent=FBgn0030737.2.mrna1;Target=FBgn0030737.2 87 465 +
Chr1	stalkie_big_nohaplotig	exon	158338646	158338731	100	-	.	Parent=FBgn0030737.2.mrna1;Target=FBgn0030737.2 1 86 +
Chr1	stalkie_big_nohaplotig	CDS	158334669	158334802	.	-	2	Parent=FBgn0030737.2.mrna1;Target=FBgn0030737.2 866 999 +
Chr1	stalkie_big_nohaplotig	CDS	158334871	158335270	.	-	0	Parent=FBgn0030737.2.mrna1;Target=FBgn0030737.2 466 865 +
Chr1	stalkie_big_nohaplotig	CDS	158338166	158338544	.	-	1	Parent=FBgn0030737.2.mrna1;Target=FBgn0030737.2 87 465 +
Chr1	stalkie_big_nohaplotig	CDS	158338646	158338731	.	-	0	Parent=FBgn0030737.2.mrna1;Target=FBgn0030737.2 1 86 +
Chr1	stalkie_big_nohaplotig	mRNA	158335248	158335997	.	+	.	ID=comp153723_c0_seq1.mrna1;geneID=comp153723_c0_seq1.path1;Name=comp153723_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=747;mismatches=3;indels=6;unknowns=0;Target=comp153723_c0_seq1 756 1 .;CDS_Target=comp153723_c0_seq1 694 515 .;locus=RLOC_00012967
Chr1	stalkie_big_nohaplotig	exon	158335248	158335997	98	+	.	Parent=comp153723_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	158335756	158335935	.	+	0	Parent=comp153723_c0_seq1.mrna1
Chr1	gffcl	locus	158343828	158347782	.	-	.	ID=RLOC_00012968;geneIDs=FBgn0051106.2.path1;transcripts=FBgn0051106.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158343828	158347782	.	-	.	ID=FBgn0051106.2.mrna1;geneID=FBgn0051106.2.path1;Name=FBgn0051106.2;Dir=sensecoverage=98.8;identity=99.7;matches=1670;mismatches=5;indels=0;unknowns=0;locus=RLOC_00012968
Chr1	stalkie_big_nohaplotig	exon	158343828	158344029	100	-	.	Parent=FBgn0051106.2.mrna1;Target=FBgn0051106.2 1494 1695 +
Chr1	stalkie_big_nohaplotig	exon	158344148	158344304	96	-	.	Parent=FBgn0051106.2.mrna1;Target=FBgn0051106.2 1337 1493 +
Chr1	stalkie_big_nohaplotig	exon	158344381	158344510	100	-	.	Parent=FBgn0051106.2.mrna1;Target=FBgn0051106.2 1207 1336 +
Chr1	stalkie_big_nohaplotig	exon	158344577	158344897	100	-	.	Parent=FBgn0051106.2.mrna1;Target=FBgn0051106.2 886 1206 +
Chr1	stalkie_big_nohaplotig	exon	158345006	158345262	100	-	.	Parent=FBgn0051106.2.mrna1;Target=FBgn0051106.2 629 885 +
Chr1	stalkie_big_nohaplotig	exon	158345379	158345482	100	-	.	Parent=FBgn0051106.2.mrna1;Target=FBgn0051106.2 525 628 +
Chr1	stalkie_big_nohaplotig	exon	158345712	158346036	100	-	.	Parent=FBgn0051106.2.mrna1;Target=FBgn0051106.2 200 524 +
Chr1	stalkie_big_nohaplotig	exon	158346113	158346205	100	-	.	Parent=FBgn0051106.2.mrna1;Target=FBgn0051106.2 107 199 +
Chr1	stalkie_big_nohaplotig	exon	158347697	158347782	100	-	.	Parent=FBgn0051106.2.mrna1;Target=FBgn0051106.2 21 106 +
Chr1	stalkie_big_nohaplotig	CDS	158343828	158344029	.	-	1	Parent=FBgn0051106.2.mrna1;Target=FBgn0051106.2 1494 1695 +
Chr1	stalkie_big_nohaplotig	CDS	158344148	158344304	.	-	2	Parent=FBgn0051106.2.mrna1;Target=FBgn0051106.2 1337 1493 +
Chr1	stalkie_big_nohaplotig	CDS	158344381	158344510	.	-	0	Parent=FBgn0051106.2.mrna1;Target=FBgn0051106.2 1207 1336 +
Chr1	stalkie_big_nohaplotig	CDS	158344577	158344897	.	-	0	Parent=FBgn0051106.2.mrna1;Target=FBgn0051106.2 886 1206 +
Chr1	stalkie_big_nohaplotig	CDS	158345006	158345262	.	-	2	Parent=FBgn0051106.2.mrna1;Target=FBgn0051106.2 629 885 +
Chr1	stalkie_big_nohaplotig	CDS	158345379	158345482	.	-	1	Parent=FBgn0051106.2.mrna1;Target=FBgn0051106.2 525 628 +
Chr1	stalkie_big_nohaplotig	CDS	158345712	158346036	.	-	2	Parent=FBgn0051106.2.mrna1;Target=FBgn0051106.2 200 524 +
Chr1	stalkie_big_nohaplotig	CDS	158346113	158346205	.	-	2	Parent=FBgn0051106.2.mrna1;Target=FBgn0051106.2 107 199 +
Chr1	stalkie_big_nohaplotig	CDS	158347697	158347781	.	-	0	Parent=FBgn0051106.2.mrna1;Target=FBgn0051106.2 22 106 +
Chr1	gffcl	locus	158361242	158361889	.	-	.	ID=RLOC_00012969;geneIDs=comp47904_c0_seq1.path1;transcripts=comp47904_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158361242	158361889	.	-	.	ID=comp47904_c0_seq1.mrna1;geneID=comp47904_c0_seq1.path1;Name=comp47904_c0_seq1;Dir=indeterminatecoverage=96.4;identity=99.8;matches=647;mismatches=0;indels=1;unknowns=0;Target=comp47904_c0_seq1 647 1 .;CDS_Target=comp47904_c0_seq1 95 3 .;locus=RLOC_00012969
Chr1	stalkie_big_nohaplotig	exon	158361242	158361889	99	-	.	Parent=comp47904_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	158361794	158361887	.	-	0	Parent=comp47904_c0_seq1.mrna1
Chr1	gffcl	locus	158367841	158378011	.	-	.	ID=RLOC_00012970;geneIDs=FBgn0030331.1.path1,comp155944_c1_seq1.path1;transcripts=comp155944_c1_seq1.mrna1,FBgn0030331.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158367841	158373021	.	-	.	ID=comp155944_c1_seq1.mrna1;geneID=comp155944_c1_seq1.path1;Name=comp155944_c1_seq1;Dir=sensecoverage=98.4;identity=100.0;matches=2180;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012970
Chr1	stalkie_big_nohaplotig	exon	158367841	158368241	100	-	.	Parent=comp155944_c1_seq1.mrna1;Target=comp155944_c1_seq1 1780 2180 +
Chr1	stalkie_big_nohaplotig	exon	158368315	158368471	100	-	.	Parent=comp155944_c1_seq1.mrna1;Target=comp155944_c1_seq1 1623 1779 +
Chr1	stalkie_big_nohaplotig	exon	158368537	158369020	100	-	.	Parent=comp155944_c1_seq1.mrna1;Target=comp155944_c1_seq1 1139 1622 +
Chr1	stalkie_big_nohaplotig	exon	158369094	158369460	100	-	.	Parent=comp155944_c1_seq1.mrna1;Target=comp155944_c1_seq1 772 1138 +
Chr1	stalkie_big_nohaplotig	exon	158369526	158369850	100	-	.	Parent=comp155944_c1_seq1.mrna1;Target=comp155944_c1_seq1 447 771 +
Chr1	stalkie_big_nohaplotig	exon	158369914	158370024	100	-	.	Parent=comp155944_c1_seq1.mrna1;Target=comp155944_c1_seq1 336 446 +
Chr1	stalkie_big_nohaplotig	exon	158370174	158370182	100	-	.	Parent=comp155944_c1_seq1.mrna1;Target=comp155944_c1_seq1 327 335 +
Chr1	stalkie_big_nohaplotig	exon	158372696	158373021	100	-	.	Parent=comp155944_c1_seq1.mrna1;Target=comp155944_c1_seq1 1 326 +
Chr1	stalkie_big_nohaplotig	CDS	158368016	158368241	.	-	1	Parent=comp155944_c1_seq1.mrna1;Target=comp155944_c1_seq1 1780 2005 +
Chr1	stalkie_big_nohaplotig	CDS	158368315	158368471	.	-	2	Parent=comp155944_c1_seq1.mrna1;Target=comp155944_c1_seq1 1623 1779 +
Chr1	stalkie_big_nohaplotig	CDS	158368537	158369020	.	-	0	Parent=comp155944_c1_seq1.mrna1;Target=comp155944_c1_seq1 1139 1622 +
Chr1	stalkie_big_nohaplotig	CDS	158369094	158369460	.	-	1	Parent=comp155944_c1_seq1.mrna1;Target=comp155944_c1_seq1 772 1138 +
Chr1	stalkie_big_nohaplotig	CDS	158369526	158369850	.	-	2	Parent=comp155944_c1_seq1.mrna1;Target=comp155944_c1_seq1 447 771 +
Chr1	stalkie_big_nohaplotig	CDS	158369914	158370024	.	-	2	Parent=comp155944_c1_seq1.mrna1;Target=comp155944_c1_seq1 336 446 +
Chr1	stalkie_big_nohaplotig	CDS	158370174	158370182	.	-	2	Parent=comp155944_c1_seq1.mrna1;Target=comp155944_c1_seq1 327 335 +
Chr1	stalkie_big_nohaplotig	CDS	158372696	158372765	.	-	0	Parent=comp155944_c1_seq1.mrna1;Target=comp155944_c1_seq1 257 326 +
Chr1	stalkie_big_nohaplotig	mRNA	158368019	158378011	.	-	.	ID=FBgn0030331.1.mrna1;geneID=FBgn0030331.1.path1;Name=FBgn0030331.1;Dir=sensecoverage=100.0;identity=100.0;matches=1716;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012970
Chr1	stalkie_big_nohaplotig	exon	158368019	158368241	100	-	.	Parent=FBgn0030331.1.mrna1;Target=FBgn0030331.1 1494 1716 +
Chr1	stalkie_big_nohaplotig	exon	158368315	158368471	100	-	.	Parent=FBgn0030331.1.mrna1;Target=FBgn0030331.1 1337 1493 +
Chr1	stalkie_big_nohaplotig	exon	158368537	158369020	100	-	.	Parent=FBgn0030331.1.mrna1;Target=FBgn0030331.1 853 1336 +
Chr1	stalkie_big_nohaplotig	exon	158369094	158369460	100	-	.	Parent=FBgn0030331.1.mrna1;Target=FBgn0030331.1 486 852 +
Chr1	stalkie_big_nohaplotig	exon	158369526	158369850	100	-	.	Parent=FBgn0030331.1.mrna1;Target=FBgn0030331.1 161 485 +
Chr1	stalkie_big_nohaplotig	exon	158369914	158370024	100	-	.	Parent=FBgn0030331.1.mrna1;Target=FBgn0030331.1 50 160 +
Chr1	stalkie_big_nohaplotig	exon	158370174	158370182	100	-	.	Parent=FBgn0030331.1.mrna1;Target=FBgn0030331.1 41 49 +
Chr1	stalkie_big_nohaplotig	exon	158377972	158378011	100	-	.	Parent=FBgn0030331.1.mrna1;Target=FBgn0030331.1 1 40 +
Chr1	stalkie_big_nohaplotig	CDS	158368019	158368241	.	-	1	Parent=FBgn0030331.1.mrna1;Target=FBgn0030331.1 1494 1716 +
Chr1	stalkie_big_nohaplotig	CDS	158368315	158368471	.	-	2	Parent=FBgn0030331.1.mrna1;Target=FBgn0030331.1 1337 1493 +
Chr1	stalkie_big_nohaplotig	CDS	158368537	158369020	.	-	0	Parent=FBgn0030331.1.mrna1;Target=FBgn0030331.1 853 1336 +
Chr1	stalkie_big_nohaplotig	CDS	158369094	158369460	.	-	1	Parent=FBgn0030331.1.mrna1;Target=FBgn0030331.1 486 852 +
Chr1	stalkie_big_nohaplotig	CDS	158369526	158369850	.	-	2	Parent=FBgn0030331.1.mrna1;Target=FBgn0030331.1 161 485 +
Chr1	stalkie_big_nohaplotig	CDS	158369914	158370024	.	-	2	Parent=FBgn0030331.1.mrna1;Target=FBgn0030331.1 50 160 +
Chr1	stalkie_big_nohaplotig	CDS	158370174	158370182	.	-	2	Parent=FBgn0030331.1.mrna1;Target=FBgn0030331.1 41 49 +
Chr1	stalkie_big_nohaplotig	CDS	158377972	158378011	.	-	0	Parent=FBgn0030331.1.mrna1;Target=FBgn0030331.1 1 40 +
Chr1	gffcl	locus	158387279	158388512	.	-	.	ID=RLOC_00012971;geneIDs=comp134662_c0_seq1.path1;transcripts=comp134662_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158387279	158388512	.	-	.	ID=comp134662_c0_seq1.mrna1;geneID=comp134662_c0_seq1.path1;Name=comp134662_c0_seq1;Dir=antisensecoverage=99.9;identity=99.9;matches=1121;mismatches=1;indels=0;unknowns=0;locus=RLOC_00012971
Chr1	stalkie_big_nohaplotig	exon	158387279	158387678	100	-	.	Parent=comp134662_c0_seq1.mrna1;Target=comp134662_c0_seq1 1 400 -
Chr1	stalkie_big_nohaplotig	exon	158387734	158388024	99	-	.	Parent=comp134662_c0_seq1.mrna1;Target=comp134662_c0_seq1 401 691 -
Chr1	stalkie_big_nohaplotig	exon	158388082	158388512	100	-	.	Parent=comp134662_c0_seq1.mrna1;Target=comp134662_c0_seq1 692 1122 -
Chr1	stalkie_big_nohaplotig	CDS	158387535	158387678	.	-	0	Parent=comp134662_c0_seq1.mrna1;Target=comp134662_c0_seq1 257 400 .
Chr1	stalkie_big_nohaplotig	CDS	158387734	158388024	.	-	0	Parent=comp134662_c0_seq1.mrna1;Target=comp134662_c0_seq1 401 691 .
Chr1	stalkie_big_nohaplotig	CDS	158388082	158388165	.	-	0	Parent=comp134662_c0_seq1.mrna1;Target=comp134662_c0_seq1 692 775 .
Chr1	gffcl	locus	158390460	158392894	.	-	.	ID=RLOC_00012972;geneIDs=comp154158_c0_seq1.path1;transcripts=comp154158_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158390460	158392894	.	-	.	ID=comp154158_c0_seq1.mrna1;geneID=comp154158_c0_seq1.path1;Name=comp154158_c0_seq1;Dir=antisensecoverage=95.9;identity=95.0;matches=877;mismatches=26;indels=20;unknowns=0;locus=RLOC_00012972
Chr1	stalkie_big_nohaplotig	exon	158390460	158390767	98	-	.	Parent=comp154158_c0_seq1.mrna1;Target=comp154158_c0_seq1 40 348 -
Chr1	stalkie_big_nohaplotig	exon	158390971	158391066	80	-	.	Parent=comp154158_c0_seq1.mrna1;Target=comp154158_c0_seq1 349 463 -
Chr1	stalkie_big_nohaplotig	exon	158391248	158391350	100	-	.	Parent=comp154158_c0_seq1.mrna1;Target=comp154158_c0_seq1 464 566 -
Chr1	stalkie_big_nohaplotig	exon	158391547	158391598	96	-	.	Parent=comp154158_c0_seq1.mrna1;Target=comp154158_c0_seq1 567 618 -
Chr1	stalkie_big_nohaplotig	exon	158391783	158391848	100	-	.	Parent=comp154158_c0_seq1.mrna1;Target=comp154158_c0_seq1 619 684 -
Chr1	stalkie_big_nohaplotig	exon	158392019	158392103	100	-	.	Parent=comp154158_c0_seq1.mrna1;Target=comp154158_c0_seq1 685 769 -
Chr1	stalkie_big_nohaplotig	exon	158392330	158392395	98	-	.	Parent=comp154158_c0_seq1.mrna1;Target=comp154158_c0_seq1 770 835 -
Chr1	stalkie_big_nohaplotig	exon	158392768	158392894	88	-	.	Parent=comp154158_c0_seq1.mrna1;Target=comp154158_c0_seq1 836 962 -
Chr1	stalkie_big_nohaplotig	CDS	158392394	158392395	.	-	2	Parent=comp154158_c0_seq1.mrna1;Target=comp154158_c0_seq1 834 835 .
Chr1	stalkie_big_nohaplotig	CDS	158392768	158392894	.	-	0	Parent=comp154158_c0_seq1.mrna1;Target=comp154158_c0_seq1 836 962 .
Chr1	gffcl	locus	158394440	158398003	.	+	.	ID=RLOC_00012973;geneIDs=FBgn0029736.1.path1;transcripts=FBgn0029736.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158394440	158398003	.	+	.	ID=FBgn0029736.1.mrna1;geneID=FBgn0029736.1.path1;Name=FBgn0029736.1;Dir=sensecoverage=100.0;identity=99.9;matches=2448;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012973
Chr1	stalkie_big_nohaplotig	exon	158394440	158394551	100	+	.	Parent=FBgn0029736.1.mrna1;Target=FBgn0029736.1 1 112 +
Chr1	stalkie_big_nohaplotig	exon	158394721	158394831	99	+	.	Parent=FBgn0029736.1.mrna1;Target=FBgn0029736.1 113 223 +
Chr1	stalkie_big_nohaplotig	exon	158394897	158395155	99	+	.	Parent=FBgn0029736.1.mrna1;Target=FBgn0029736.1 224 482 +
Chr1	stalkie_big_nohaplotig	exon	158395210	158395969	99	+	.	Parent=FBgn0029736.1.mrna1;Target=FBgn0029736.1 483 1242 +
Chr1	stalkie_big_nohaplotig	exon	158396077	158396232	100	+	.	Parent=FBgn0029736.1.mrna1;Target=FBgn0029736.1 1243 1398 +
Chr1	stalkie_big_nohaplotig	exon	158396309	158396486	100	+	.	Parent=FBgn0029736.1.mrna1;Target=FBgn0029736.1 1399 1576 +
Chr1	stalkie_big_nohaplotig	exon	158396543	158396749	100	+	.	Parent=FBgn0029736.1.mrna1;Target=FBgn0029736.1 1577 1783 +
Chr1	stalkie_big_nohaplotig	exon	158396810	158397081	100	+	.	Parent=FBgn0029736.1.mrna1;Target=FBgn0029736.1 1784 2055 +
Chr1	stalkie_big_nohaplotig	exon	158397546	158397839	100	+	.	Parent=FBgn0029736.1.mrna1;Target=FBgn0029736.1 2056 2349 +
Chr1	stalkie_big_nohaplotig	exon	158397902	158398003	100	+	.	Parent=FBgn0029736.1.mrna1;Target=FBgn0029736.1 2350 2451 +
Chr1	stalkie_big_nohaplotig	CDS	158394440	158394551	.	+	0	Parent=FBgn0029736.1.mrna1;Target=FBgn0029736.1 1 112 +
Chr1	stalkie_big_nohaplotig	CDS	158394721	158394831	.	+	2	Parent=FBgn0029736.1.mrna1;Target=FBgn0029736.1 113 223 +
Chr1	stalkie_big_nohaplotig	CDS	158394897	158395155	.	+	2	Parent=FBgn0029736.1.mrna1;Target=FBgn0029736.1 224 482 +
Chr1	stalkie_big_nohaplotig	CDS	158395210	158395969	.	+	1	Parent=FBgn0029736.1.mrna1;Target=FBgn0029736.1 483 1242 +
Chr1	stalkie_big_nohaplotig	CDS	158396077	158396232	.	+	0	Parent=FBgn0029736.1.mrna1;Target=FBgn0029736.1 1243 1398 +
Chr1	stalkie_big_nohaplotig	CDS	158396309	158396486	.	+	0	Parent=FBgn0029736.1.mrna1;Target=FBgn0029736.1 1399 1576 +
Chr1	stalkie_big_nohaplotig	CDS	158396543	158396749	.	+	2	Parent=FBgn0029736.1.mrna1;Target=FBgn0029736.1 1577 1783 +
Chr1	stalkie_big_nohaplotig	CDS	158396810	158397081	.	+	2	Parent=FBgn0029736.1.mrna1;Target=FBgn0029736.1 1784 2055 +
Chr1	stalkie_big_nohaplotig	CDS	158397546	158397839	.	+	0	Parent=FBgn0029736.1.mrna1;Target=FBgn0029736.1 2056 2349 +
Chr1	stalkie_big_nohaplotig	CDS	158397902	158398003	.	+	0	Parent=FBgn0029736.1.mrna1;Target=FBgn0029736.1 2350 2451 +
Chr1	gffcl	locus	158408525	159489710	.	+	.	ID=RLOC_00012974;geneIDs=comp151645_c0_seq1.path2;transcripts=comp151645_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	158408525	159489710	.	+	.	ID=comp151645_c0_seq1.mrna2;geneID=comp151645_c0_seq1.path2;Name=comp151645_c0_seq1;Dir=indeterminatecoverage=81.0;identity=95.1;matches=308;mismatches=13;indels=3;unknowns=0;Target=comp151645_c0_seq1 332 264 .;locus=RLOC_00012974
Chr1	stalkie_big_nohaplotig	exon	158408525	158408550	92	+	.	Parent=comp151645_c0_seq1.mrna2;Target=comp151645_c0_seq1 102 77 .
Chr1	stalkie_big_nohaplotig	exon	159489416	159489710	95	+	.	Parent=comp151645_c0_seq1.mrna2;Target=comp151645_c0_seq1 400 103 .
Chr1	stalkie_big_nohaplotig	CDS	159489574	159489642	.	+	0	Parent=comp151645_c0_seq1.mrna2
Chr1	gffcl	locus	158561831	158562372	.	-	.	ID=RLOC_00012975;geneIDs=comp145339_c0_seq1.path1;transcripts=comp145339_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158561831	158562372	.	-	.	ID=comp145339_c0_seq1.mrna1;geneID=comp145339_c0_seq1.path1;Name=comp145339_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=540;mismatches=2;indels=0;unknowns=0;Target=comp145339_c0_seq1 542 1 .;CDS_Target=comp145339_c0_seq1 190 2 .;locus=RLOC_00012975
Chr1	stalkie_big_nohaplotig	exon	158561831	158562372	99	-	.	Parent=comp145339_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	158562183	158562371	.	-	0	Parent=comp145339_c0_seq1.mrna1
Chr1	gffcl	locus	158659699	158660626	.	-	.	ID=RLOC_00012976;geneIDs=comp146622_c0_seq1.path1;transcripts=comp146622_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158659699	158660626	.	-	.	ID=comp146622_c0_seq1.mrna1;geneID=comp146622_c0_seq1.path1;Name=comp146622_c0_seq1;Dir=indeterminatecoverage=97.8;identity=99.7;matches=925;mismatches=3;indels=0;unknowns=0;Target=comp146622_c0_seq1 928 1 .;CDS_Target=comp146622_c0_seq1 927 379 .;locus=RLOC_00012976
Chr1	stalkie_big_nohaplotig	exon	158659699	158660626	99	-	.	Parent=comp146622_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	158659700	158660248	.	-	0	Parent=comp146622_c0_seq1.mrna1
Chr1	gffcl	locus	158681067	158686932	.	+	.	ID=RLOC_00012977;geneIDs=comp156941_c0_seq1.path1;transcripts=comp156941_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158681067	158686932	.	+	.	ID=comp156941_c0_seq1.mrna1;geneID=comp156941_c0_seq1.path1;Name=comp156941_c0_seq1;Dir=sensecoverage=96.7;identity=98.5;matches=516;mismatches=8;indels=0;unknowns=0;locus=RLOC_00012977
Chr1	stalkie_big_nohaplotig	exon	158681067	158681260	98	+	.	Parent=comp156941_c0_seq1.mrna1;Target=comp156941_c0_seq1 1 194 +
Chr1	stalkie_big_nohaplotig	exon	158681326	158681446	100	+	.	Parent=comp156941_c0_seq1.mrna1;Target=comp156941_c0_seq1 195 315 +
Chr1	stalkie_big_nohaplotig	exon	158686724	158686932	97	+	.	Parent=comp156941_c0_seq1.mrna1;Target=comp156941_c0_seq1 316 524 +
Chr1	stalkie_big_nohaplotig	CDS	158681147	158681260	.	+	0	Parent=comp156941_c0_seq1.mrna1;Target=comp156941_c0_seq1 81 194 +
Chr1	stalkie_big_nohaplotig	CDS	158681326	158681446	.	+	0	Parent=comp156941_c0_seq1.mrna1;Target=comp156941_c0_seq1 195 315 +
Chr1	stalkie_big_nohaplotig	CDS	158686724	158686806	.	+	2	Parent=comp156941_c0_seq1.mrna1;Target=comp156941_c0_seq1 316 398 +
Chr1	gffcl	locus	158742543	158744252	.	-	.	ID=RLOC_00012978;geneIDs=FBgn0051798.2.path1;transcripts=FBgn0051798.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158742543	158744252	.	-	.	ID=FBgn0051798.2.mrna1;geneID=FBgn0051798.2.path1;Name=FBgn0051798.2;Dir=sensecoverage=98.7;identity=98.4;matches=1515;mismatches=19;indels=5;unknowns=0;Target=FBgn0051798.2 23 145 +;locus=RLOC_00012978
Chr1	stalkie_big_nohaplotig	exon	158742543	158742939	99	-	.	Parent=FBgn0051798.2.mrna1;Target=FBgn0051798.2 1164 1560 +
Chr1	stalkie_big_nohaplotig	exon	158742999	158743206	98	-	.	Parent=FBgn0051798.2.mrna1;Target=FBgn0051798.2 956 1163 +
Chr1	stalkie_big_nohaplotig	exon	158743274	158743504	97	-	.	Parent=FBgn0051798.2.mrna1;Target=FBgn0051798.2 725 955 +
Chr1	stalkie_big_nohaplotig	exon	158743555	158744252	98	-	.	Parent=FBgn0051798.2.mrna1;Target=FBgn0051798.2 22 724 +
Chr1	stalkie_big_nohaplotig	CDS	158744134	158744251	.	-	0	Parent=FBgn0051798.2.mrna1
Chr1	gffcl	locus	158744660	158745234	.	+	.	ID=RLOC_00012979;geneIDs=comp1075708_c0_seq1.path1;transcripts=comp1075708_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158744660	158745234	.	+	.	ID=comp1075708_c0_seq1.mrna1;geneID=comp1075708_c0_seq1.path1;Name=comp1075708_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.9;matches=564;mismatches=11;indels=1;unknowns=0;Target=comp1075708_c0_seq1 577 2 .;CDS_Target=comp1075708_c0_seq1 187 44 .;locus=RLOC_00012979
Chr1	stalkie_big_nohaplotig	exon	158744660	158745234	97	+	.	Parent=comp1075708_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	158744702	158744845	.	+	0	Parent=comp1075708_c0_seq1.mrna1
Chr1	gffcl	locus	158745725	158784172	.	+	.	ID=RLOC_00012980;geneIDs=FBgn0262685.1.path1;transcripts=FBgn0262685.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158745725	158784172	.	+	.	ID=FBgn0262685.1.mrna1;geneID=FBgn0262685.1.path1;Name=FBgn0262685.1;Dir=sensecoverage=100.0;identity=99.5;matches=1091;mismatches=3;indels=2;unknowns=0;locus=RLOC_00012980
Chr1	stalkie_big_nohaplotig	exon	158745725	158745943	99	+	.	Parent=FBgn0262685.1.mrna1;Target=FBgn0262685.1 1 219 +
Chr1	stalkie_big_nohaplotig	exon	158778315	158778476	100	+	.	Parent=FBgn0262685.1.mrna1;Target=FBgn0262685.1 220 381 +
Chr1	stalkie_big_nohaplotig	exon	158780658	158780781	100	+	.	Parent=FBgn0262685.1.mrna1;Target=FBgn0262685.1 382 505 +
Chr1	stalkie_big_nohaplotig	exon	158781101	158781254	98	+	.	Parent=FBgn0262685.1.mrna1;Target=FBgn0262685.1 506 658 +
Chr1	stalkie_big_nohaplotig	exon	158781899	158782090	100	+	.	Parent=FBgn0262685.1.mrna1;Target=FBgn0262685.1 659 850 +
Chr1	stalkie_big_nohaplotig	exon	158782181	158782296	100	+	.	Parent=FBgn0262685.1.mrna1;Target=FBgn0262685.1 851 966 +
Chr1	stalkie_big_nohaplotig	exon	158782491	158782583	98	+	.	Parent=FBgn0262685.1.mrna1;Target=FBgn0262685.1 967 1060 +
Chr1	stalkie_big_nohaplotig	exon	158784138	158784172	100	+	.	Parent=FBgn0262685.1.mrna1;Target=FBgn0262685.1 1061 1095 +
Chr1	stalkie_big_nohaplotig	CDS	158745725	158745943	.	+	0	Parent=FBgn0262685.1.mrna1;Target=FBgn0262685.1 1 219 +
Chr1	stalkie_big_nohaplotig	CDS	158778315	158778476	.	+	0	Parent=FBgn0262685.1.mrna1;Target=FBgn0262685.1 220 381 +
Chr1	stalkie_big_nohaplotig	CDS	158780658	158780781	.	+	0	Parent=FBgn0262685.1.mrna1;Target=FBgn0262685.1 382 505 +
Chr1	stalkie_big_nohaplotig	CDS	158781101	158781254	.	+	2	Parent=FBgn0262685.1.mrna1;Target=FBgn0262685.1 506 658 +
Chr1	stalkie_big_nohaplotig	CDS	158781899	158782090	.	+	1	Parent=FBgn0262685.1.mrna1;Target=FBgn0262685.1 659 850 +
Chr1	stalkie_big_nohaplotig	CDS	158782181	158782296	.	+	1	Parent=FBgn0262685.1.mrna1;Target=FBgn0262685.1 851 966 +
Chr1	stalkie_big_nohaplotig	CDS	158782491	158782583	.	+	2	Parent=FBgn0262685.1.mrna1;Target=FBgn0262685.1 967 1060 +
Chr1	stalkie_big_nohaplotig	CDS	158784138	158784172	.	+	2	Parent=FBgn0262685.1.mrna1;Target=FBgn0262685.1 1061 1095 +
Chr1	gffcl	locus	158814633	158815885	.	-	.	ID=RLOC_00012981;geneIDs=FBgn0016041.1.path1;transcripts=FBgn0016041.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158814633	158815885	.	-	.	ID=FBgn0016041.1.mrna1;geneID=FBgn0016041.1.path1;Name=FBgn0016041.1;Dir=sensecoverage=100.0;identity=99.7;matches=996;mismatches=3;indels=0;unknowns=0;locus=RLOC_00012981
Chr1	stalkie_big_nohaplotig	exon	158814633	158814769	100	-	.	Parent=FBgn0016041.1.mrna1;Target=FBgn0016041.1 863 999 +
Chr1	stalkie_big_nohaplotig	exon	158814839	158815256	99	-	.	Parent=FBgn0016041.1.mrna1;Target=FBgn0016041.1 445 862 +
Chr1	stalkie_big_nohaplotig	exon	158815324	158815586	100	-	.	Parent=FBgn0016041.1.mrna1;Target=FBgn0016041.1 182 444 +
Chr1	stalkie_big_nohaplotig	exon	158815705	158815885	99	-	.	Parent=FBgn0016041.1.mrna1;Target=FBgn0016041.1 1 181 +
Chr1	stalkie_big_nohaplotig	CDS	158814633	158814769	.	-	2	Parent=FBgn0016041.1.mrna1;Target=FBgn0016041.1 863 999 +
Chr1	stalkie_big_nohaplotig	CDS	158814839	158815256	.	-	0	Parent=FBgn0016041.1.mrna1;Target=FBgn0016041.1 445 862 +
Chr1	stalkie_big_nohaplotig	CDS	158815324	158815586	.	-	2	Parent=FBgn0016041.1.mrna1;Target=FBgn0016041.1 182 444 +
Chr1	stalkie_big_nohaplotig	CDS	158815705	158815885	.	-	0	Parent=FBgn0016041.1.mrna1;Target=FBgn0016041.1 1 181 +
Chr1	gffcl	locus	158817140	158818291	.	+	.	ID=RLOC_00012982;geneIDs=comp156243_c0_seq1.path1;transcripts=comp156243_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158817140	158818291	.	+	.	ID=comp156243_c0_seq1.mrna1;geneID=comp156243_c0_seq1.path1;Name=comp156243_c0_seq1;Dir=antisensecoverage=98.8;identity=96.6;matches=1061;mismatches=20;indels=17;unknowns=0;Target=comp156243_c0_seq1 531 695 .;locus=RLOC_00012982
Chr1	stalkie_big_nohaplotig	exon	158817140	158817404	96	+	.	Parent=comp156243_c0_seq1.mrna1;Target=comp156243_c0_seq1 817 1081 -
Chr1	stalkie_big_nohaplotig	exon	158817459	158818291	96	+	.	Parent=comp156243_c0_seq1.mrna1;Target=comp156243_c0_seq1 1 816 -
Chr1	stalkie_big_nohaplotig	CDS	158817580	158817744	.	+	0	Parent=comp156243_c0_seq1.mrna1
Chr1	gffcl	locus	158821690	158822931	.	-	.	ID=RLOC_00012984;geneIDs=FBgn0030305.1.path1;transcripts=FBgn0030305.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158821690	158822931	.	-	.	ID=FBgn0030305.1.mrna1;geneID=FBgn0030305.1.path1;Name=FBgn0030305.1;Dir=sensecoverage=100.0;identity=98.6;matches=1169;mismatches=16;indels=0;unknowns=0;locus=RLOC_00012984
Chr1	stalkie_big_nohaplotig	exon	158821690	158822611	98	-	.	Parent=FBgn0030305.1.mrna1;Target=FBgn0030305.1 264 1185 +
Chr1	stalkie_big_nohaplotig	exon	158822669	158822931	98	-	.	Parent=FBgn0030305.1.mrna1;Target=FBgn0030305.1 1 263 +
Chr1	stalkie_big_nohaplotig	CDS	158821690	158822611	.	-	1	Parent=FBgn0030305.1.mrna1;Target=FBgn0030305.1 264 1185 +
Chr1	stalkie_big_nohaplotig	CDS	158822669	158822931	.	-	0	Parent=FBgn0030305.1.mrna1;Target=FBgn0030305.1 1 263 +
Chr1	gffcl	locus	158824112	158831437	.	-	.	ID=RLOC_00012985;geneIDs=FBgn0030304.1.path1;transcripts=FBgn0030304.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158824112	158831437	.	-	.	ID=FBgn0030304.1.mrna1;geneID=FBgn0030304.1.path1;Name=FBgn0030304.1;Dir=sensecoverage=76.3;identity=99.5;matches=1296;mismatches=7;indels=0;unknowns=0;locus=RLOC_00012985
Chr1	stalkie_big_nohaplotig	exon	158824112	158824287	98	-	.	Parent=FBgn0030304.1.mrna1;Target=FBgn0030304.1 1532 1707 +
Chr1	stalkie_big_nohaplotig	exon	158824351	158825292	99	-	.	Parent=FBgn0030304.1.mrna1;Target=FBgn0030304.1 590 1531 +
Chr1	stalkie_big_nohaplotig	exon	158831253	158831437	100	-	.	Parent=FBgn0030304.1.mrna1;Target=FBgn0030304.1 405 589 +
Chr1	stalkie_big_nohaplotig	CDS	158824112	158824287	.	-	2	Parent=FBgn0030304.1.mrna1;Target=FBgn0030304.1 1532 1707 +
Chr1	stalkie_big_nohaplotig	CDS	158824351	158825292	.	-	2	Parent=FBgn0030304.1.mrna1;Target=FBgn0030304.1 590 1531 +
Chr1	stalkie_big_nohaplotig	CDS	158831253	158831436	.	-	0	Parent=FBgn0030304.1.mrna1;Target=FBgn0030304.1 406 589 +
Chr1	gffcl	locus	158831520	158834180	.	+	.	ID=RLOC_00012986;geneIDs=comp772441_c0_seq1.path1;transcripts=comp772441_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158831520	158834180	.	+	.	ID=comp772441_c0_seq1.mrna1;geneID=comp772441_c0_seq1.path1;Name=comp772441_c0_seq1;Dir=indeterminatecoverage=74.0;identity=99.8;matches=567;mismatches=1;indels=0;unknowns=0;Target=comp772441_c0_seq1 597 469 .;locus=RLOC_00012986
Chr1	stalkie_big_nohaplotig	exon	158831520	158831534	100	+	.	Parent=comp772441_c0_seq1.mrna1;Target=comp772441_c0_seq1 229 215 .
Chr1	stalkie_big_nohaplotig	exon	158833629	158834180	99	+	.	Parent=comp772441_c0_seq1.mrna1;Target=comp772441_c0_seq1 822 271 .
Chr1	stalkie_big_nohaplotig	CDS	158833827	158833955	.	+	0	Parent=comp772441_c0_seq1.mrna1
Chr1	gffcl	locus	158839122	158840092	.	-	.	ID=RLOC_00012987;geneIDs=comp715009_c0_seq1.path1;transcripts=comp715009_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158839122	158840092	.	-	.	ID=comp715009_c0_seq1.mrna1;geneID=comp715009_c0_seq1.path1;Name=comp715009_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.7;matches=921;mismatches=45;indels=7;unknowns=0;Target=comp715009_c0_seq1 968 1 .;CDS_Target=comp715009_c0_seq1 749 540 .;locus=RLOC_00012987
Chr1	stalkie_big_nohaplotig	exon	158839122	158840092	94	-	.	Parent=comp715009_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	158839340	158839549	.	-	0	Parent=comp715009_c0_seq1.mrna1
Chr1	gffcl	locus	158873649	158875359	.	+	.	ID=RLOC_00012988;geneIDs=comp161396_c0_seq1.path1;transcripts=comp161396_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158873649	158875359	.	+	.	ID=comp161396_c0_seq1.mrna1;geneID=comp161396_c0_seq1.path1;Name=comp161396_c0_seq1;Dir=sensecoverage=85.2;identity=97.7;matches=1619;mismatches=34;indels=4;unknowns=0;Target=comp161396_c0_seq1 1409 1576 +;locus=RLOC_00012988
Chr1	stalkie_big_nohaplotig	exon	158873649	158873845	95	+	.	Parent=comp161396_c0_seq1.mrna1;Target=comp161396_c0_seq1 2 197 +
Chr1	stalkie_big_nohaplotig	exon	158873900	158875359	97	+	.	Parent=comp161396_c0_seq1.mrna1;Target=comp161396_c0_seq1 198 1654 +
Chr1	stalkie_big_nohaplotig	CDS	158875114	158875281	.	+	0	Parent=comp161396_c0_seq1.mrna1
Chr1	gffcl	locus	158881317	158881991	.	-	.	ID=RLOC_00012989;geneIDs=FBgn0015321.2.path1;transcripts=FBgn0015321.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158881317	158881991	.	-	.	ID=FBgn0015321.2.mrna1;geneID=FBgn0015321.2.path1;Name=FBgn0015321.2;Dir=indeterminatecoverage=100.0;identity=99.3;matches=670;mismatches=5;indels=0;unknowns=0;Target=FBgn0015321.2 675 1 .;locus=RLOC_00012989
Chr1	stalkie_big_nohaplotig	exon	158881317	158881991	99	-	.	Parent=FBgn0015321.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	158881317	158881991	.	-	0	Parent=FBgn0015321.2.mrna1
Chr1	gffcl	locus	158888968	158889782	.	-	.	ID=RLOC_00012990;geneIDs=comp157961_c0_seq1.path1;transcripts=comp157961_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158888968	158889782	.	-	.	ID=comp157961_c0_seq1.mrna1;geneID=comp157961_c0_seq1.path1;Name=comp157961_c0_seq1;Dir=indeterminatecoverage=96.8;identity=93.9;matches=767;mismatches=35;indels=15;unknowns=0;Target=comp157961_c0_seq1 804 1 .;CDS_Target=comp157961_c0_seq1 347 243 .;locus=RLOC_00012990
Chr1	stalkie_big_nohaplotig	exon	158888968	158889782	93	-	.	Parent=comp157961_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	158889438	158889542	.	-	0	Parent=comp157961_c0_seq1.mrna1
Chr1	gffcl	locus	158890647	158893806	.	-	.	ID=RLOC_00012991;geneIDs=FBgn0030512.1.path1;transcripts=FBgn0030512.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158890647	158893806	.	-	.	ID=FBgn0030512.1.mrna1;geneID=FBgn0030512.1.path1;Name=FBgn0030512.1;Dir=sensecoverage=100.0;identity=99.8;matches=2393;mismatches=4;indels=0;unknowns=0;locus=RLOC_00012991
Chr1	stalkie_big_nohaplotig	exon	158890647	158891105	99	-	.	Parent=FBgn0030512.1.mrna1;Target=FBgn0030512.1 1939 2397 +
Chr1	stalkie_big_nohaplotig	exon	158891168	158891390	99	-	.	Parent=FBgn0030512.1.mrna1;Target=FBgn0030512.1 1716 1938 +
Chr1	stalkie_big_nohaplotig	exon	158891454	158892325	100	-	.	Parent=FBgn0030512.1.mrna1;Target=FBgn0030512.1 844 1715 +
Chr1	stalkie_big_nohaplotig	exon	158892594	158892843	100	-	.	Parent=FBgn0030512.1.mrna1;Target=FBgn0030512.1 594 843 +
Chr1	stalkie_big_nohaplotig	exon	158892932	158893077	100	-	.	Parent=FBgn0030512.1.mrna1;Target=FBgn0030512.1 448 593 +
Chr1	stalkie_big_nohaplotig	exon	158893158	158893323	99	-	.	Parent=FBgn0030512.1.mrna1;Target=FBgn0030512.1 282 447 +
Chr1	stalkie_big_nohaplotig	exon	158893444	158893533	100	-	.	Parent=FBgn0030512.1.mrna1;Target=FBgn0030512.1 192 281 +
Chr1	stalkie_big_nohaplotig	exon	158893616	158893806	100	-	.	Parent=FBgn0030512.1.mrna1;Target=FBgn0030512.1 1 191 +
Chr1	stalkie_big_nohaplotig	CDS	158890647	158891105	.	-	0	Parent=FBgn0030512.1.mrna1;Target=FBgn0030512.1 1939 2397 +
Chr1	stalkie_big_nohaplotig	CDS	158891168	158891390	.	-	1	Parent=FBgn0030512.1.mrna1;Target=FBgn0030512.1 1716 1938 +
Chr1	stalkie_big_nohaplotig	CDS	158891454	158892325	.	-	0	Parent=FBgn0030512.1.mrna1;Target=FBgn0030512.1 844 1715 +
Chr1	stalkie_big_nohaplotig	CDS	158892594	158892843	.	-	1	Parent=FBgn0030512.1.mrna1;Target=FBgn0030512.1 594 843 +
Chr1	stalkie_big_nohaplotig	CDS	158892932	158893077	.	-	0	Parent=FBgn0030512.1.mrna1;Target=FBgn0030512.1 448 593 +
Chr1	stalkie_big_nohaplotig	CDS	158893158	158893323	.	-	1	Parent=FBgn0030512.1.mrna1;Target=FBgn0030512.1 282 447 +
Chr1	stalkie_big_nohaplotig	CDS	158893444	158893533	.	-	1	Parent=FBgn0030512.1.mrna1;Target=FBgn0030512.1 192 281 +
Chr1	stalkie_big_nohaplotig	CDS	158893616	158893806	.	-	0	Parent=FBgn0030512.1.mrna1;Target=FBgn0030512.1 1 191 +
Chr1	gffcl	locus	158899409	158919069	.	+	.	ID=RLOC_00012992;geneIDs=FBgn0052627.1.path1,comp150484_c1_seq1.path1;transcripts=FBgn0052627.1.mrna1,comp150484_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158899409	158919069	.	+	.	ID=FBgn0052627.1.mrna1;geneID=FBgn0052627.1.path1;Name=FBgn0052627.1;Dir=sensecoverage=4.9;identity=100.0;matches=210;mismatches=0;indels=0;unknowns=0;locus=RLOC_00012992
Chr1	stalkie_big_nohaplotig	exon	158899409	158899439	100	+	.	Parent=FBgn0052627.1.mrna1;Target=FBgn0052627.1 1 31 +
Chr1	stalkie_big_nohaplotig	exon	158918891	158919069	100	+	.	Parent=FBgn0052627.1.mrna1;Target=FBgn0052627.1 32 210 +
Chr1	stalkie_big_nohaplotig	CDS	158899409	158899439	.	+	0	Parent=FBgn0052627.1.mrna1;Target=FBgn0052627.1 1 31 +
Chr1	stalkie_big_nohaplotig	CDS	158918891	158919069	.	+	2	Parent=FBgn0052627.1.mrna1;Target=FBgn0052627.1 32 210 +
Chr1	stalkie_big_nohaplotig	mRNA	158915959	158918913	.	+	.	ID=comp150484_c1_seq1.mrna1;geneID=comp150484_c1_seq1.path1;Name=comp150484_c1_seq1;Dir=antisensecoverage=100.0;identity=94.8;matches=344;mismatches=5;indels=14;unknowns=0;Target=comp150484_c1_seq1 304 351 .;locus=RLOC_00012992
Chr1	stalkie_big_nohaplotig	exon	158915959	158916296	94	+	.	Parent=comp150484_c1_seq1.mrna1;Target=comp150484_c1_seq1 24 351 -
Chr1	stalkie_big_nohaplotig	exon	158918891	158918913	100	+	.	Parent=comp150484_c1_seq1.mrna1;Target=comp150484_c1_seq1 1 23 -
Chr1	stalkie_big_nohaplotig	CDS	158915959	158916006	.	+	0	Parent=comp150484_c1_seq1.mrna1
Chr1	gffcl	locus	158949457	158970163	.	-	.	ID=RLOC_00012993;geneIDs=FBgn0052627.1.path2,comp85724_c0_seq1.path1;transcripts=FBgn0052627.1.mrna2,comp85724_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158949457	158970163	.	-	.	ID=FBgn0052627.1.mrna2;geneID=FBgn0052627.1.path2;Name=FBgn0052627.1;Dir=sensecoverage=95.1;identity=99.8;matches=4086;mismatches=9;indels=0;unknowns=0;locus=RLOC_00012993
Chr1	stalkie_big_nohaplotig	exon	158949457	158949829	100	-	.	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 3933 4305 +
Chr1	stalkie_big_nohaplotig	exon	158949891	158950088	100	-	.	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 3735 3932 +
Chr1	stalkie_big_nohaplotig	exon	158950170	158950385	100	-	.	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 3519 3734 +
Chr1	stalkie_big_nohaplotig	exon	158950473	158950900	100	-	.	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 3091 3518 +
Chr1	stalkie_big_nohaplotig	exon	158953519	158953866	100	-	.	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 2743 3090 +
Chr1	stalkie_big_nohaplotig	exon	158954058	158954190	100	-	.	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 2610 2742 +
Chr1	stalkie_big_nohaplotig	exon	158954258	158954349	100	-	.	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 2518 2609 +
Chr1	stalkie_big_nohaplotig	exon	158957325	158957492	100	-	.	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 2350 2517 +
Chr1	stalkie_big_nohaplotig	exon	158961470	158961628	100	-	.	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 2191 2349 +
Chr1	stalkie_big_nohaplotig	exon	158961803	158961962	100	-	.	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 2031 2190 +
Chr1	stalkie_big_nohaplotig	exon	158962161	158962441	99	-	.	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 1750 2030 +
Chr1	stalkie_big_nohaplotig	exon	158965254	158965391	100	-	.	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 1612 1749 +
Chr1	stalkie_big_nohaplotig	exon	158966442	158966562	100	-	.	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 1491 1611 +
Chr1	stalkie_big_nohaplotig	exon	158966648	158966791	100	-	.	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 1347 1490 +
Chr1	stalkie_big_nohaplotig	exon	158966899	158967881	99	-	.	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 364 1346 +
Chr1	stalkie_big_nohaplotig	exon	158970011	158970163	99	-	.	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 211 363 +
Chr1	stalkie_big_nohaplotig	CDS	158949457	158949829	.	-	1	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 3933 4305 +
Chr1	stalkie_big_nohaplotig	CDS	158949891	158950088	.	-	1	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 3735 3932 +
Chr1	stalkie_big_nohaplotig	CDS	158950170	158950385	.	-	1	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 3519 3734 +
Chr1	stalkie_big_nohaplotig	CDS	158950473	158950900	.	-	0	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 3091 3518 +
Chr1	stalkie_big_nohaplotig	CDS	158953519	158953866	.	-	0	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 2743 3090 +
Chr1	stalkie_big_nohaplotig	CDS	158954058	158954190	.	-	1	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 2610 2742 +
Chr1	stalkie_big_nohaplotig	CDS	158954258	158954349	.	-	0	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 2518 2609 +
Chr1	stalkie_big_nohaplotig	CDS	158957325	158957492	.	-	0	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 2350 2517 +
Chr1	stalkie_big_nohaplotig	CDS	158961470	158961628	.	-	0	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 2191 2349 +
Chr1	stalkie_big_nohaplotig	CDS	158961803	158961962	.	-	1	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 2031 2190 +
Chr1	stalkie_big_nohaplotig	CDS	158962161	158962441	.	-	0	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 1750 2030 +
Chr1	stalkie_big_nohaplotig	CDS	158965254	158965391	.	-	0	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 1612 1749 +
Chr1	stalkie_big_nohaplotig	CDS	158966442	158966562	.	-	1	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 1491 1611 +
Chr1	stalkie_big_nohaplotig	CDS	158966648	158966791	.	-	1	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 1347 1490 +
Chr1	stalkie_big_nohaplotig	CDS	158966899	158967881	.	-	0	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 364 1346 +
Chr1	stalkie_big_nohaplotig	CDS	158970011	158970163	.	-	0	Parent=FBgn0052627.1.mrna2;Target=FBgn0052627.1 211 363 +
Chr1	stalkie_big_nohaplotig	mRNA	158954331	158954531	.	-	.	ID=comp85724_c0_seq1.mrna1;geneID=comp85724_c0_seq1.path1;Name=comp85724_c0_seq1;Dir=indeterminatecoverage=91.7;identity=97.0;matches=195;mismatches=5;indels=1;unknowns=0;Target=comp85724_c0_seq1 218 19 .;CDS_Target=comp85724_c0_seq1 100 20 .;locus=RLOC_00012993
Chr1	stalkie_big_nohaplotig	exon	158954331	158954531	97	-	.	Parent=comp85724_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	158954449	158954530	.	-	0	Parent=comp85724_c0_seq1.mrna1
Chr1	gffcl	locus	158951431	158951727	.	-	.	ID=RLOC_00012994;geneIDs=comp142213_c0_seq1.path1;transcripts=comp142213_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158951431	158951727	.	-	.	ID=comp142213_c0_seq1.mrna1;geneID=comp142213_c0_seq1.path1;Name=comp142213_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=297;mismatches=0;indels=0;unknowns=0;Target=comp142213_c0_seq1 297 1 .;CDS_Target=comp142213_c0_seq1 81 1 .;locus=RLOC_00012994
Chr1	stalkie_big_nohaplotig	exon	158951431	158951727	100	-	.	Parent=comp142213_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	158951647	158951727	.	-	0	Parent=comp142213_c0_seq1.mrna1
Chr1	gffcl	locus	158952281	158952488	.	+	.	ID=RLOC_00012995;geneIDs=comp150212_c0_seq1.path1;transcripts=comp150212_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158952281	158952488	.	+	.	ID=comp150212_c0_seq1.mrna1;geneID=comp150212_c0_seq1.path1;Name=comp150212_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=208;mismatches=0;indels=0;unknowns=0;Target=comp150212_c0_seq1 208 1 .;CDS_Target=comp150212_c0_seq1 77 3 .;locus=RLOC_00012995
Chr1	stalkie_big_nohaplotig	exon	158952281	158952488	100	+	.	Parent=comp150212_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	158952283	158952357	.	+	0	Parent=comp150212_c0_seq1.mrna1
Chr1	gffcl	locus	158954534	158955045	.	-	.	ID=RLOC_00012996;geneIDs=comp135480_c0_seq1.path1;transcripts=comp135480_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	158954534	158955045	.	-	.	ID=comp135480_c0_seq1.mrna1;geneID=comp135480_c0_seq1.path1;Name=comp135480_c0_seq1;Dir=indeterminatecoverage=83.0;identity=99.8;matches=511;mismatches=1;indels=0;unknowns=0;Target=comp135480_c0_seq1 617 106 .;CDS_Target=comp135480_c0_seq1 465 376 .;locus=RLOC_00012996
Chr1	stalkie_big_nohaplotig	exon	158954534	158955045	99	-	.	Parent=comp135480_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	158954686	158954775	.	-	0	Parent=comp135480_c0_seq1.mrna1
Chr1	gffcl	locus	158956882	158956983	.	-	.	ID=RLOC_00012997;geneIDs=comp116853_c0_seq1.path2;transcripts=comp116853_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	158956882	158956983	.	-	.	ID=comp116853_c0_seq1.mrna2;geneID=comp116853_c0_seq1.path2;Name=comp116853_c0_seq1;Dir=indeterminatecoverage=41.8;identity=91.2;matches=93;mismatches=9;indels=0;unknowns=0;Target=comp116853_c0_seq1 244 143 .;locus=RLOC_00012997
Chr1	stalkie_big_nohaplotig	exon	158956882	158956983	91	-	.	Parent=comp116853_c0_seq1.mrna2
Chr1	gffcl	locus	159041055	159042867	.	-	.	ID=RLOC_00012998;geneIDs=comp161629_c0_seq1.path1;transcripts=comp161629_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159041055	159042867	.	-	.	ID=comp161629_c0_seq1.mrna1;geneID=comp161629_c0_seq1.path1;Name=comp161629_c0_seq1;Dir=antisensecoverage=100.0;identity=90.1;matches=1584;mismatches=84;indels=90;unknowns=0;locus=RLOC_00012998
Chr1	stalkie_big_nohaplotig	exon	159041055	159041213	94	-	.	Parent=comp161629_c0_seq1.mrna1;Target=comp161629_c0_seq1 1 157 -
Chr1	stalkie_big_nohaplotig	exon	159041296	159042607	88	-	.	Parent=comp161629_c0_seq1.mrna1;Target=comp161629_c0_seq1 158 1545 -
Chr1	stalkie_big_nohaplotig	exon	159042663	159042867	97	-	.	Parent=comp161629_c0_seq1.mrna1;Target=comp161629_c0_seq1 1546 1750 -
Chr1	stalkie_big_nohaplotig	CDS	159042154	159042607	.	-	1	Parent=comp161629_c0_seq1.mrna1;Target=comp161629_c0_seq1 1092 1545 .
Chr1	stalkie_big_nohaplotig	CDS	159042663	159042676	.	-	0	Parent=comp161629_c0_seq1.mrna1;Target=comp161629_c0_seq1 1546 1559 .
Chr1	gffcl	locus	159055590	159056494	.	+	.	ID=RLOC_00012999;geneIDs=comp157443_c0_seq1.path1;transcripts=comp157443_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159055590	159056494	.	+	.	ID=comp157443_c0_seq1.mrna1;geneID=comp157443_c0_seq1.path1;Name=comp157443_c0_seq1;Dir=sensecoverage=97.6;identity=97.1;matches=832;mismatches=12;indels=13;unknowns=0;locus=RLOC_00012999
Chr1	stalkie_big_nohaplotig	exon	159055590	159055799	98	+	.	Parent=comp157443_c0_seq1.mrna1;Target=comp157443_c0_seq1 22 231 +
Chr1	stalkie_big_nohaplotig	exon	159055861	159056494	96	+	.	Parent=comp157443_c0_seq1.mrna1;Target=comp157443_c0_seq1 232 878 +
Chr1	stalkie_big_nohaplotig	CDS	159055680	159055799	.	+	0	Parent=comp157443_c0_seq1.mrna1;Target=comp157443_c0_seq1 112 231 +
Chr1	stalkie_big_nohaplotig	CDS	159055861	159056073	.	+	0	Parent=comp157443_c0_seq1.mrna1;Target=comp157443_c0_seq1 232 444 +
Chr1	gffcl	locus	159188691	159190135	.	+	.	ID=RLOC_00013002;geneIDs=FBgn0028685.1.path1;transcripts=FBgn0028685.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159188691	159190135	.	+	.	ID=FBgn0028685.1.mrna1;geneID=FBgn0028685.1.path1;Name=FBgn0028685.1;Dir=sensecoverage=100.0;identity=98.3;matches=1183;mismatches=20;indels=0;unknowns=0;locus=RLOC_00013002
Chr1	stalkie_big_nohaplotig	exon	159188691	159188811	100	+	.	Parent=FBgn0028685.1.mrna1;Target=FBgn0028685.1 1 121 +
Chr1	stalkie_big_nohaplotig	exon	159188870	159188989	100	+	.	Parent=FBgn0028685.1.mrna1;Target=FBgn0028685.1 122 241 +
Chr1	stalkie_big_nohaplotig	exon	159189043	159189763	98	+	.	Parent=FBgn0028685.1.mrna1;Target=FBgn0028685.1 242 962 +
Chr1	stalkie_big_nohaplotig	exon	159189837	159189977	96	+	.	Parent=FBgn0028685.1.mrna1;Target=FBgn0028685.1 963 1103 +
Chr1	stalkie_big_nohaplotig	exon	159190036	159190135	99	+	.	Parent=FBgn0028685.1.mrna1;Target=FBgn0028685.1 1104 1203 +
Chr1	stalkie_big_nohaplotig	CDS	159188691	159188811	.	+	0	Parent=FBgn0028685.1.mrna1;Target=FBgn0028685.1 1 121 +
Chr1	stalkie_big_nohaplotig	CDS	159188870	159188989	.	+	2	Parent=FBgn0028685.1.mrna1;Target=FBgn0028685.1 122 241 +
Chr1	stalkie_big_nohaplotig	CDS	159189043	159189763	.	+	2	Parent=FBgn0028685.1.mrna1;Target=FBgn0028685.1 242 962 +
Chr1	stalkie_big_nohaplotig	CDS	159189837	159189977	.	+	1	Parent=FBgn0028685.1.mrna1;Target=FBgn0028685.1 963 1103 +
Chr1	stalkie_big_nohaplotig	CDS	159190036	159190135	.	+	1	Parent=FBgn0028685.1.mrna1;Target=FBgn0028685.1 1104 1203 +
Chr1	gffcl	locus	159190231	159191394	.	-	.	ID=RLOC_00013003;geneIDs=FBgn0029857.1.path1;transcripts=FBgn0029857.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159190231	159191394	.	-	.	ID=FBgn0029857.1.mrna1;geneID=FBgn0029857.1.path1;Name=FBgn0029857.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1156;mismatches=8;indels=0;unknowns=0;Target=FBgn0029857.1 1164 1 .;locus=RLOC_00013003
Chr1	stalkie_big_nohaplotig	exon	159190231	159191394	99	-	.	Parent=FBgn0029857.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159190231	159191394	.	-	0	Parent=FBgn0029857.1.mrna1
Chr1	gffcl	locus	159192355	159192954	.	+	.	ID=RLOC_00013004;geneIDs=FBgn0030645.1.path1;transcripts=FBgn0030645.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159192355	159192954	.	+	.	ID=FBgn0030645.1.mrna1;geneID=FBgn0030645.1.path1;Name=FBgn0030645.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=600;mismatches=0;indels=0;unknowns=0;Target=FBgn0030645.1 600 1 .;locus=RLOC_00013004
Chr1	stalkie_big_nohaplotig	exon	159192355	159192954	100	+	.	Parent=FBgn0030645.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159192355	159192954	.	+	0	Parent=FBgn0030645.1.mrna1
Chr1	gffcl	locus	159193018	159195712	.	-	.	ID=RLOC_00013005;geneIDs=FBgn0030646.1.path1;transcripts=FBgn0030646.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159193018	159195712	.	-	.	ID=FBgn0030646.1.mrna1;geneID=FBgn0030646.1.path1;Name=FBgn0030646.1;Dir=sensecoverage=100.0;identity=99.7;matches=1645;mismatches=5;indels=0;unknowns=0;locus=RLOC_00013005
Chr1	stalkie_big_nohaplotig	exon	159193018	159193895	99	-	.	Parent=FBgn0030646.1.mrna1;Target=FBgn0030646.1 773 1650 +
Chr1	stalkie_big_nohaplotig	exon	159194767	159194977	100	-	.	Parent=FBgn0030646.1.mrna1;Target=FBgn0030646.1 562 772 +
Chr1	stalkie_big_nohaplotig	exon	159195040	159195159	99	-	.	Parent=FBgn0030646.1.mrna1;Target=FBgn0030646.1 442 561 +
Chr1	stalkie_big_nohaplotig	exon	159195218	159195586	99	-	.	Parent=FBgn0030646.1.mrna1;Target=FBgn0030646.1 73 441 +
Chr1	stalkie_big_nohaplotig	exon	159195641	159195712	98	-	.	Parent=FBgn0030646.1.mrna1;Target=FBgn0030646.1 1 72 +
Chr1	stalkie_big_nohaplotig	CDS	159193018	159193895	.	-	2	Parent=FBgn0030646.1.mrna1;Target=FBgn0030646.1 773 1650 +
Chr1	stalkie_big_nohaplotig	CDS	159194767	159194977	.	-	0	Parent=FBgn0030646.1.mrna1;Target=FBgn0030646.1 562 772 +
Chr1	stalkie_big_nohaplotig	CDS	159195040	159195159	.	-	0	Parent=FBgn0030646.1.mrna1;Target=FBgn0030646.1 442 561 +
Chr1	stalkie_big_nohaplotig	CDS	159195218	159195586	.	-	0	Parent=FBgn0030646.1.mrna1;Target=FBgn0030646.1 73 441 +
Chr1	stalkie_big_nohaplotig	CDS	159195641	159195712	.	-	0	Parent=FBgn0030646.1.mrna1;Target=FBgn0030646.1 1 72 +
Chr1	gffcl	locus	159198368	159198756	.	+	.	ID=RLOC_00013006;geneIDs=comp135817_c0_seq1.path1;transcripts=comp135817_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159198368	159198756	.	+	.	ID=comp135817_c0_seq1.mrna1;geneID=comp135817_c0_seq1.path1;Name=comp135817_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=389;mismatches=0;indels=0;unknowns=0;Target=comp135817_c0_seq1 389 1 .;CDS_Target=comp135817_c0_seq1 69 1 .;locus=RLOC_00013006
Chr1	stalkie_big_nohaplotig	exon	159198368	159198756	100	+	.	Parent=comp135817_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159198368	159198436	.	+	0	Parent=comp135817_c0_seq1.mrna1
Chr1	gffcl	locus	159198781	159202943	.	+	.	ID=RLOC_00013007;geneIDs=FBgn0030648.1.path1,comp162190_c0_seq1.path1;transcripts=comp162190_c0_seq1.mrna1,FBgn0030648.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159198781	159202943	.	+	.	ID=comp162190_c0_seq1.mrna1;geneID=comp162190_c0_seq1.path1;Name=comp162190_c0_seq1;Dir=antisensecoverage=99.8;identity=97.8;matches=3844;mismatches=31;indels=55;unknowns=0;locus=RLOC_00013007
Chr1	stalkie_big_nohaplotig	exon	159198781	159201365	96	+	.	Parent=comp162190_c0_seq1.mrna1;Target=comp162190_c0_seq1 1349 3884 -
Chr1	stalkie_big_nohaplotig	exon	159201546	159201768	99	+	.	Parent=comp162190_c0_seq1.mrna1;Target=comp162190_c0_seq1 1126 1348 -
Chr1	stalkie_big_nohaplotig	exon	159201825	159202943	99	+	.	Parent=comp162190_c0_seq1.mrna1;Target=comp162190_c0_seq1 7 1125 -
Chr1	stalkie_big_nohaplotig	CDS	159201148	159201365	.	+	0	Parent=comp162190_c0_seq1.mrna1;Target=comp162190_c0_seq1 1349 1566 .
Chr1	stalkie_big_nohaplotig	CDS	159201546	159201768	.	+	1	Parent=comp162190_c0_seq1.mrna1;Target=comp162190_c0_seq1 1126 1348 .
Chr1	stalkie_big_nohaplotig	CDS	159201825	159202811	.	+	0	Parent=comp162190_c0_seq1.mrna1;Target=comp162190_c0_seq1 139 1125 .
Chr1	stalkie_big_nohaplotig	mRNA	159200493	159202808	.	+	.	ID=FBgn0030648.1.mrna1;geneID=FBgn0030648.1.path1;Name=FBgn0030648.1;Dir=sensecoverage=100.0;identity=99.6;matches=1599;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013007
Chr1	stalkie_big_nohaplotig	exon	159200493	159200552	100	+	.	Parent=FBgn0030648.1.mrna1;Target=FBgn0030648.1 1 60 +
Chr1	stalkie_big_nohaplotig	exon	159201028	159201365	99	+	.	Parent=FBgn0030648.1.mrna1;Target=FBgn0030648.1 61 398 +
Chr1	stalkie_big_nohaplotig	exon	159201546	159201768	99	+	.	Parent=FBgn0030648.1.mrna1;Target=FBgn0030648.1 399 621 +
Chr1	stalkie_big_nohaplotig	exon	159201825	159202808	99	+	.	Parent=FBgn0030648.1.mrna1;Target=FBgn0030648.1 622 1605 +
Chr1	stalkie_big_nohaplotig	CDS	159200493	159200552	.	+	0	Parent=FBgn0030648.1.mrna1;Target=FBgn0030648.1 1 60 +
Chr1	stalkie_big_nohaplotig	CDS	159201028	159201365	.	+	0	Parent=FBgn0030648.1.mrna1;Target=FBgn0030648.1 61 398 +
Chr1	stalkie_big_nohaplotig	CDS	159201546	159201768	.	+	1	Parent=FBgn0030648.1.mrna1;Target=FBgn0030648.1 399 621 +
Chr1	stalkie_big_nohaplotig	CDS	159201825	159202808	.	+	0	Parent=FBgn0030648.1.mrna1;Target=FBgn0030648.1 622 1605 +
Chr1	gffcl	locus	159243302	159253231	.	+	.	ID=RLOC_00013008;geneIDs=FBgn0027287.1.path1;transcripts=FBgn0027287.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159243302	159253231	.	+	.	ID=FBgn0027287.1.mrna1;geneID=FBgn0027287.1.path1;Name=FBgn0027287.1;Dir=sensecoverage=99.6;identity=99.3;matches=4218;mismatches=30;indels=0;unknowns=0;locus=RLOC_00013008
Chr1	stalkie_big_nohaplotig	exon	159243302	159246609	99	+	.	Parent=FBgn0027287.1.mrna1;Target=FBgn0027287.1 19 3326 +
Chr1	stalkie_big_nohaplotig	exon	159248739	159248902	98	+	.	Parent=FBgn0027287.1.mrna1;Target=FBgn0027287.1 3327 3490 +
Chr1	stalkie_big_nohaplotig	exon	159248990	159249193	99	+	.	Parent=FBgn0027287.1.mrna1;Target=FBgn0027287.1 3491 3694 +
Chr1	stalkie_big_nohaplotig	exon	159252593	159252859	100	+	.	Parent=FBgn0027287.1.mrna1;Target=FBgn0027287.1 3695 3961 +
Chr1	stalkie_big_nohaplotig	exon	159252927	159253231	99	+	.	Parent=FBgn0027287.1.mrna1;Target=FBgn0027287.1 3962 4266 +
Chr1	stalkie_big_nohaplotig	CDS	159243302	159246609	.	+	0	Parent=FBgn0027287.1.mrna1;Target=FBgn0027287.1 19 3326 +
Chr1	stalkie_big_nohaplotig	CDS	159248739	159248902	.	+	1	Parent=FBgn0027287.1.mrna1;Target=FBgn0027287.1 3327 3490 +
Chr1	stalkie_big_nohaplotig	CDS	159248990	159249193	.	+	2	Parent=FBgn0027287.1.mrna1;Target=FBgn0027287.1 3491 3694 +
Chr1	stalkie_big_nohaplotig	CDS	159252593	159252859	.	+	2	Parent=FBgn0027287.1.mrna1;Target=FBgn0027287.1 3695 3961 +
Chr1	stalkie_big_nohaplotig	CDS	159252927	159253231	.	+	2	Parent=FBgn0027287.1.mrna1;Target=FBgn0027287.1 3962 4266 +
Chr1	gffcl	locus	159247051	159259183	.	+	.	ID=RLOC_00013009;geneIDs=comp162668_c0_seq1.path1;transcripts=comp162668_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159247051	159259183	.	+	.	ID=comp162668_c0_seq1.mrna1;geneID=comp162668_c0_seq1.path1;Name=comp162668_c0_seq1;Dir=indeterminatecoverage=93.6;identity=93.8;matches=923;mismatches=21;indels=40;unknowns=0;locus=RLOC_00013009
Chr1	stalkie_big_nohaplotig	exon	159247051	159247059	100	+	.	Parent=comp162668_c0_seq1.mrna1;Target=comp162668_c0_seq1 77 69 .
Chr1	stalkie_big_nohaplotig	exon	159255752	159255762	100	+	.	Parent=comp162668_c0_seq1.mrna1;Target=comp162668_c0_seq1 88 78 .
Chr1	stalkie_big_nohaplotig	exon	159258260	159259183	93	+	.	Parent=comp162668_c0_seq1.mrna1;Target=comp162668_c0_seq1 1056 93 .
Chr1	stalkie_big_nohaplotig	CDS	159247052	159247059	.	+	0	Parent=comp162668_c0_seq1.mrna1;Target=comp162668_c0_seq1 77 70 .
Chr1	stalkie_big_nohaplotig	CDS	159255752	159255762	.	+	1	Parent=comp162668_c0_seq1.mrna1;Target=comp162668_c0_seq1 88 78 .
Chr1	stalkie_big_nohaplotig	CDS	159258260	159258293	.	+	2	Parent=comp162668_c0_seq1.mrna1;Target=comp162668_c0_seq1 126 93 .
Chr1	gffcl	locus	159256124	159256859	.	+	.	ID=RLOC_00013010;geneIDs=comp155742_c1_seq1.path1;transcripts=comp155742_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159256124	159256859	.	+	.	ID=comp155742_c1_seq1.mrna1;geneID=comp155742_c1_seq1.path1;Name=comp155742_c1_seq1;Dir=indeterminatecoverage=99.9;identity=97.7;matches=725;mismatches=10;indels=7;unknowns=0;Target=comp155742_c1_seq1 742 2 .;CDS_Target=comp155742_c1_seq1 50 3 .;locus=RLOC_00013010
Chr1	stalkie_big_nohaplotig	exon	159256124	159256859	97	+	.	Parent=comp155742_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159256125	159256173	.	+	0	Parent=comp155742_c1_seq1.mrna1
Chr1	gffcl	locus	159257062	159257530	.	-	.	ID=RLOC_00013011;geneIDs=comp144988_c0_seq1.path1;transcripts=comp144988_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159257062	159257530	.	-	.	ID=comp144988_c0_seq1.mrna1;geneID=comp144988_c0_seq1.path1;Name=comp144988_c0_seq1;Dir=indeterminatecoverage=96.9;identity=98.9;matches=464;mismatches=3;indels=2;unknowns=0;Target=comp144988_c0_seq1 482 16 .;CDS_Target=comp144988_c0_seq1 84 16 .;locus=RLOC_00013011
Chr1	stalkie_big_nohaplotig	exon	159257062	159257530	98	-	.	Parent=comp144988_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159257462	159257530	.	-	0	Parent=comp144988_c0_seq1.mrna1
Chr1	gffcl	locus	159259859	159297932	.	-	.	ID=RLOC_00013012;geneIDs=FBgn0022710.1.path1;transcripts=FBgn0022710.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159259859	159297932	.	-	.	ID=FBgn0022710.1.mrna1;geneID=FBgn0022710.1.path1;Name=FBgn0022710.1;Dir=sensecoverage=100.0;identity=99.5;matches=4617;mismatches=21;indels=0;unknowns=0;locus=RLOC_00013012
Chr1	stalkie_big_nohaplotig	exon	159259859	159262944	99	-	.	Parent=FBgn0022710.1.mrna1;Target=FBgn0022710.1 1553 4638 +
Chr1	stalkie_big_nohaplotig	exon	159263009	159263109	99	-	.	Parent=FBgn0022710.1.mrna1;Target=FBgn0022710.1 1452 1552 +
Chr1	stalkie_big_nohaplotig	exon	159263168	159264304	99	-	.	Parent=FBgn0022710.1.mrna1;Target=FBgn0022710.1 315 1451 +
Chr1	stalkie_big_nohaplotig	exon	159271160	159271437	99	-	.	Parent=FBgn0022710.1.mrna1;Target=FBgn0022710.1 37 314 +
Chr1	stalkie_big_nohaplotig	exon	159297897	159297932	100	-	.	Parent=FBgn0022710.1.mrna1;Target=FBgn0022710.1 1 36 +
Chr1	stalkie_big_nohaplotig	CDS	159259859	159262944	.	-	2	Parent=FBgn0022710.1.mrna1;Target=FBgn0022710.1 1553 4638 +
Chr1	stalkie_big_nohaplotig	CDS	159263009	159263109	.	-	1	Parent=FBgn0022710.1.mrna1;Target=FBgn0022710.1 1452 1552 +
Chr1	stalkie_big_nohaplotig	CDS	159263168	159264304	.	-	1	Parent=FBgn0022710.1.mrna1;Target=FBgn0022710.1 315 1451 +
Chr1	stalkie_big_nohaplotig	CDS	159271160	159271437	.	-	0	Parent=FBgn0022710.1.mrna1;Target=FBgn0022710.1 37 314 +
Chr1	stalkie_big_nohaplotig	CDS	159297897	159297932	.	-	0	Parent=FBgn0022710.1.mrna1;Target=FBgn0022710.1 1 36 +
Chr1	gffcl	locus	159361465	159361767	.	+	.	ID=RLOC_00013013;geneIDs=comp66881_c0_seq1.path1;transcripts=comp66881_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159361465	159361767	.	+	.	ID=comp66881_c0_seq1.mrna1;geneID=comp66881_c0_seq1.path1;Name=comp66881_c0_seq1;Dir=indeterminatecoverage=87.8;identity=97.1;matches=300;mismatches=3;indels=6;unknowns=0;Target=comp66881_c0_seq1 352 44 .;CDS_Target=comp66881_c0_seq1 309 46 .;locus=RLOC_00013013
Chr1	stalkie_big_nohaplotig	exon	159361465	159361767	97	+	.	Parent=comp66881_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159361467	159361724	.	+	0	Parent=comp66881_c0_seq1.mrna1
Chr1	gffcl	locus	159393055	159393989	.	+	.	ID=RLOC_00013014;geneIDs=FBgn0031196.1.path1;transcripts=FBgn0031196.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159393055	159393989	.	+	.	ID=FBgn0031196.1.mrna1;geneID=FBgn0031196.1.path1;Name=FBgn0031196.1;Dir=indeterminatecoverage=96.5;identity=99.3;matches=928;mismatches=7;indels=0;unknowns=0;Target=FBgn0031196.1 935 1 .;CDS_Target=FBgn0031196.1 933 1 .;locus=RLOC_00013014
Chr1	stalkie_big_nohaplotig	exon	159393055	159393989	99	+	.	Parent=FBgn0031196.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159393055	159393987	.	+	0	Parent=FBgn0031196.1.mrna1
Chr1	gffcl	locus	159395900	159421762	.	-	.	ID=RLOC_00013015;geneIDs=FBgn0031195.1.path1,comp161216_c2_seq1.path1;transcripts=FBgn0031195.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159395900	159421762	.	-	.	ID=FBgn0031195.1.mrna1;geneID=FBgn0031195.1.path1;Name=FBgn0031195.1;Dir=sensecoverage=93.8;identity=99.8;matches=1160;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013015
Chr1	stalkie_big_nohaplotig	exon	159395900	159396017	100	-	.	Parent=FBgn0031195.1.mrna1;Target=FBgn0031195.1 1122 1239 +
Chr1	stalkie_big_nohaplotig	exon	159420661	159420782	100	-	.	Parent=FBgn0031195.1.mrna1;Target=FBgn0031195.1 1000 1121 +
Chr1	stalkie_big_nohaplotig	exon	159420841	159421762	99	-	.	Parent=FBgn0031195.1.mrna1;Target=FBgn0031195.1 78 999 +
Chr1	stalkie_big_nohaplotig	CDS	159395900	159396017	.	-	1	Parent=FBgn0031195.1.mrna1;Target=FBgn0031195.1 1122 1239 +
Chr1	stalkie_big_nohaplotig	CDS	159420661	159420782	.	-	0	Parent=FBgn0031195.1.mrna1;Target=FBgn0031195.1 1000 1121 +
Chr1	stalkie_big_nohaplotig	CDS	159420841	159421761	.	-	0	Parent=FBgn0031195.1.mrna1;Target=FBgn0031195.1 79 999 +
Chr1	gffcl	locus	159397550	159399698	.	+	.	ID=RLOC_00013016;geneIDs=FBgn0031194.1.path1;transcripts=FBgn0031194.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159397550	159399698	.	+	.	ID=FBgn0031194.1.mrna1;geneID=FBgn0031194.1.path1;Name=FBgn0031194.1;Dir=sensecoverage=99.9;identity=99.2;matches=1850;mismatches=14;indels=0;unknowns=0;locus=RLOC_00013016
Chr1	stalkie_big_nohaplotig	exon	159397550	159397772	99	+	.	Parent=FBgn0031194.1.mrna1;Target=FBgn0031194.1 3 225 +
Chr1	stalkie_big_nohaplotig	exon	159397846	159397946	100	+	.	Parent=FBgn0031194.1.mrna1;Target=FBgn0031194.1 226 326 +
Chr1	stalkie_big_nohaplotig	exon	159398002	159398882	98	+	.	Parent=FBgn0031194.1.mrna1;Target=FBgn0031194.1 327 1207 +
Chr1	stalkie_big_nohaplotig	exon	159398956	159399597	99	+	.	Parent=FBgn0031194.1.mrna1;Target=FBgn0031194.1 1208 1849 +
Chr1	stalkie_big_nohaplotig	exon	159399682	159399698	100	+	.	Parent=FBgn0031194.1.mrna1;Target=FBgn0031194.1 1850 1866 +
Chr1	stalkie_big_nohaplotig	CDS	159397551	159397772	.	+	0	Parent=FBgn0031194.1.mrna1;Target=FBgn0031194.1 4 225 +
Chr1	stalkie_big_nohaplotig	CDS	159397846	159397946	.	+	0	Parent=FBgn0031194.1.mrna1;Target=FBgn0031194.1 226 326 +
Chr1	stalkie_big_nohaplotig	CDS	159398002	159398882	.	+	1	Parent=FBgn0031194.1.mrna1;Target=FBgn0031194.1 327 1207 +
Chr1	stalkie_big_nohaplotig	CDS	159398956	159399597	.	+	2	Parent=FBgn0031194.1.mrna1;Target=FBgn0031194.1 1208 1849 +
Chr1	stalkie_big_nohaplotig	CDS	159399682	159399698	.	+	2	Parent=FBgn0031194.1.mrna1;Target=FBgn0031194.1 1850 1866 +
Chr1	gffcl	locus	159409693	159411516	.	+	.	ID=RLOC_00013017;geneIDs=comp163155_c0_seq1.path1;transcripts=comp163155_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159409693	159411516	.	+	.	ID=comp163155_c0_seq1.mrna1;geneID=comp163155_c0_seq1.path1;Name=comp163155_c0_seq1;Dir=indeterminatecoverage=88.8;identity=87.1;matches=1705;mismatches=119;indels=133;unknowns=0;Target=comp163155_c0_seq1 2205 249 .;CDS_Target=comp163155_c0_seq1 398 249 .;locus=RLOC_00013017
Chr1	stalkie_big_nohaplotig	exon	159409693	159411516	87	+	.	Parent=comp163155_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159409693	159409842	.	+	0	Parent=comp163155_c0_seq1.mrna1
Chr1	gffcl	locus	159411942	159413384	.	-	.	ID=RLOC_00013018;geneIDs=comp162794_c0_seq1.path1;transcripts=comp162794_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159411942	159413384	.	-	.	ID=comp162794_c0_seq1.mrna1;geneID=comp162794_c0_seq1.path1;Name=comp162794_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.1;matches=1410;mismatches=31;indels=11;unknowns=0;Target=comp162794_c0_seq1 1450 1 .;CDS_Target=comp162794_c0_seq1 601 509 .;locus=RLOC_00013018
Chr1	stalkie_big_nohaplotig	exon	159411942	159413384	97	-	.	Parent=comp162794_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159412785	159412877	.	-	0	Parent=comp162794_c0_seq1.mrna1
Chr1	gffcl	locus	159414332	159418484	.	-	.	ID=RLOC_00013019;geneIDs=FBgn0262866.1.path1;transcripts=FBgn0262866.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159414332	159418484	.	-	.	ID=FBgn0262866.1.mrna1;geneID=FBgn0262866.1.path1;Name=FBgn0262866.1;Dir=sensecoverage=100.0;identity=99.7;matches=2605;mismatches=8;indels=0;unknowns=0;locus=RLOC_00013019
Chr1	stalkie_big_nohaplotig	exon	159414332	159414912	99	-	.	Parent=FBgn0262866.1.mrna1;Target=FBgn0262866.1 2033 2613 +
Chr1	stalkie_big_nohaplotig	exon	159416453	159418484	99	-	.	Parent=FBgn0262866.1.mrna1;Target=FBgn0262866.1 1 2032 +
Chr1	stalkie_big_nohaplotig	CDS	159414332	159414912	.	-	2	Parent=FBgn0262866.1.mrna1;Target=FBgn0262866.1 2033 2613 +
Chr1	stalkie_big_nohaplotig	CDS	159416453	159418484	.	-	0	Parent=FBgn0262866.1.mrna1;Target=FBgn0262866.1 1 2032 +
Chr1	gffcl	locus	159470622	159471104	.	+	.	ID=RLOC_00013020;geneIDs=comp154440_c0_seq1.path1;transcripts=comp154440_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159470622	159471104	.	+	.	ID=comp154440_c0_seq1.mrna1;geneID=comp154440_c0_seq1.path1;Name=comp154440_c0_seq1;Dir=indeterminatecoverage=100.0;identity=82.7;matches=431;mismatches=19;indels=71;unknowns=0;Target=comp154440_c0_seq1 488 1 .;CDS_Target=comp154440_c0_seq1 156 67 .;locus=RLOC_00013020
Chr1	stalkie_big_nohaplotig	exon	159470622	159471104	82	+	.	Parent=comp154440_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159470688	159470775	.	+	0	Parent=comp154440_c0_seq1.mrna1
Chr1	gffcl	locus	159471168	159471605	.	-	.	ID=RLOC_00013021;geneIDs=comp152041_c0_seq1.path2;transcripts=comp152041_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	159471168	159471605	.	-	.	ID=comp152041_c0_seq1.mrna2;geneID=comp152041_c0_seq1.path2;Name=comp152041_c0_seq1;Dir=indeterminatecoverage=62.5;identity=90.7;matches=400;mismatches=34;indels=7;unknowns=0;Target=comp152041_c0_seq1 632 196 .;CDS_Target=comp152041_c0_seq1 279 196 .;locus=RLOC_00013021
Chr1	stalkie_big_nohaplotig	exon	159471168	159471605	90	-	.	Parent=comp152041_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	159471522	159471605	.	-	0	Parent=comp152041_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	159472312	159484350	.	-	.	ID=FBgn0027279.1.mrna1;geneID=FBgn0027279.1.path1;Name=FBgn0027279.1;Dir=sensecoverage=99.6;identity=99.5;matches=3727;mismatches=17;indels=1;unknowns=0;Target=FBgn0027279.1 15 197 +;locus=RLOC_00013022
Chr1	stalkie_big_nohaplotig	exon	159472312	159472721	99	-	.	Parent=FBgn0027279.1.mrna1;Target=FBgn0027279.1 3350 3759 +
Chr1	stalkie_big_nohaplotig	exon	159473771	159474004	99	-	.	Parent=FBgn0027279.1.mrna1;Target=FBgn0027279.1 3116 3349 +
Chr1	stalkie_big_nohaplotig	exon	159476764	159477022	100	-	.	Parent=FBgn0027279.1.mrna1;Target=FBgn0027279.1 2857 3115 +
Chr1	stalkie_big_nohaplotig	exon	159477086	159477169	98	-	.	Parent=FBgn0027279.1.mrna1;Target=FBgn0027279.1 2773 2856 +
Chr1	stalkie_big_nohaplotig	exon	159478260	159479193	99	-	.	Parent=FBgn0027279.1.mrna1;Target=FBgn0027279.1 1839 2772 +
Chr1	stalkie_big_nohaplotig	exon	159479248	159479445	98	-	.	Parent=FBgn0027279.1.mrna1;Target=FBgn0027279.1 1641 1838 +
Chr1	stalkie_big_nohaplotig	exon	159479507	159479675	100	-	.	Parent=FBgn0027279.1.mrna1;Target=FBgn0027279.1 1472 1640 +
Chr1	stalkie_big_nohaplotig	exon	159479833	159479936	100	-	.	Parent=FBgn0027279.1.mrna1;Target=FBgn0027279.1 1368 1471 +
Chr1	stalkie_big_nohaplotig	exon	159480012	159480200	99	-	.	Parent=FBgn0027279.1.mrna1;Target=FBgn0027279.1 1179 1367 +
Chr1	stalkie_big_nohaplotig	exon	159480264	159480545	99	-	.	Parent=FBgn0027279.1.mrna1;Target=FBgn0027279.1 897 1178 +
Chr1	stalkie_big_nohaplotig	exon	159480612	159480816	99	-	.	Parent=FBgn0027279.1.mrna1;Target=FBgn0027279.1 692 896 +
Chr1	stalkie_big_nohaplotig	exon	159481918	159482005	100	-	.	Parent=FBgn0027279.1.mrna1;Target=FBgn0027279.1 604 691 +
Chr1	stalkie_big_nohaplotig	exon	159482073	159482227	100	-	.	Parent=FBgn0027279.1.mrna1;Target=FBgn0027279.1 449 603 +
Chr1	stalkie_big_nohaplotig	exon	159482304	159482535	98	-	.	Parent=FBgn0027279.1.mrna1;Target=FBgn0027279.1 217 448 +
Chr1	stalkie_big_nohaplotig	exon	159484150	159484350	99	-	.	Parent=FBgn0027279.1.mrna1;Target=FBgn0027279.1 15 216 +
Chr1	stalkie_big_nohaplotig	CDS	159484169	159484350	.	-	0	Parent=FBgn0027279.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159472701	159473794	.	+	.	ID=comp159139_c0_seq1.mrna1;geneID=comp159139_c0_seq1.path1;Name=comp159139_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.0;matches=1051;mismatches=30;indels=14;unknowns=0;Target=comp159139_c0_seq1 1082 1 .;CDS_Target=comp159139_c0_seq1 987 826 .;locus=RLOC_00013022
Chr1	stalkie_big_nohaplotig	exon	159472701	159473794	95	+	.	Parent=comp159139_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159473539	159473699	.	+	0	Parent=comp159139_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159479652	159479856	.	+	.	ID=comp51491_c0_seq1.mrna1;geneID=comp51491_c0_seq1.path1;Name=comp51491_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=205;mismatches=0;indels=0;unknowns=0;Target=comp51491_c0_seq1 205 1 .;CDS_Target=comp51491_c0_seq1 205 131 .;locus=RLOC_00013022
Chr1	stalkie_big_nohaplotig	exon	159479652	159479856	100	+	.	Parent=comp51491_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159479782	159479856	.	+	0	Parent=comp51491_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159484331	159488660	.	-	.	ID=comp156342_c0_seq1.mrna1;geneID=comp156342_c0_seq1.path1;Name=comp156342_c0_seq1;Dir=antisensecoverage=99.9;identity=98.8;matches=1059;mismatches=13;indels=0;unknowns=0;locus=RLOC_00013022
Chr1	stalkie_big_nohaplotig	exon	159484331	159484350	100	-	.	Parent=comp156342_c0_seq1.mrna1;Target=comp156342_c0_seq1 1 20 -
Chr1	stalkie_big_nohaplotig	exon	159487609	159488660	98	-	.	Parent=comp156342_c0_seq1.mrna1;Target=comp156342_c0_seq1 21 1072 -
Chr1	stalkie_big_nohaplotig	CDS	159484333	159484350	.	-	0	Parent=comp156342_c0_seq1.mrna1;Target=comp156342_c0_seq1 3 20 .
Chr1	stalkie_big_nohaplotig	CDS	159487609	159487971	.	-	0	Parent=comp156342_c0_seq1.mrna1;Target=comp156342_c0_seq1 21 383 .
Chr1	stalkie_big_nohaplotig	mRNA	159502129	159502676	.	-	.	ID=comp154569_c0_seq1.mrna1;geneID=comp154569_c0_seq1.path1;Name=comp154569_c0_seq1;Dir=antisensecoverage=100.0;identity=98.4;matches=419;mismatches=5;indels=2;unknowns=0;Target=comp154569_c0_seq1 127 186 .;locus=RLOC_00013022
Chr1	stalkie_big_nohaplotig	exon	159502129	159502517	98	-	.	Parent=comp154569_c0_seq1.mrna1;Target=comp154569_c0_seq1 1 391 -
Chr1	stalkie_big_nohaplotig	exon	159502642	159502676	97	-	.	Parent=comp154569_c0_seq1.mrna1;Target=comp154569_c0_seq1 392 426 -
Chr1	stalkie_big_nohaplotig	CDS	159502255	159502314	.	-	0	Parent=comp154569_c0_seq1.mrna1
Chr1	gffcl	locus	159485999	159486545	.	-	.	ID=RLOC_00013023;geneIDs=comp152302_c4_seq1.path1;transcripts=comp152302_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159485999	159486545	.	-	.	ID=comp152302_c4_seq1.mrna1;geneID=comp152302_c4_seq1.path1;Name=comp152302_c4_seq1;Dir=indeterminatecoverage=99.8;identity=97.4;matches=533;mismatches=11;indels=3;unknowns=0;Target=comp152302_c4_seq1 544 1 .;CDS_Target=comp152302_c4_seq1 518 450 .;locus=RLOC_00013023
Chr1	stalkie_big_nohaplotig	exon	159485999	159486545	97	-	.	Parent=comp152302_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159486025	159486093	.	-	0	Parent=comp152302_c4_seq1.mrna1
Chr1	gffcl	locus	159492941	159493660	.	-	.	ID=RLOC_00013024;geneIDs=comp154286_c0_seq1.path1;transcripts=comp154286_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159492941	159493660	.	-	.	ID=comp154286_c0_seq1.mrna1;geneID=comp154286_c0_seq1.path1;Name=comp154286_c0_seq1;Dir=indeterminatecoverage=98.1;identity=99.2;matches=715;mismatches=5;indels=1;unknowns=0;Target=comp154286_c0_seq1 721 1 .;CDS_Target=comp154286_c0_seq1 435 202 .;locus=RLOC_00013024
Chr1	stalkie_big_nohaplotig	exon	159492941	159493660	99	-	.	Parent=comp154286_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159493227	159493460	.	-	0	Parent=comp154286_c0_seq1.mrna1
Chr1	gffcl	locus	159498195	159500170	.	+	.	ID=RLOC_00013025;geneIDs=FBgn0036242.1.path1;transcripts=FBgn0036242.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159498195	159500170	.	+	.	ID=FBgn0036242.1.mrna1;geneID=FBgn0036242.1.path1;Name=FBgn0036242.1;Dir=sensecoverage=99.4;identity=99.0;matches=1839;mismatches=19;indels=0;unknowns=0;locus=RLOC_00013025
Chr1	stalkie_big_nohaplotig	exon	159498195	159498526	98	+	.	Parent=FBgn0036242.1.mrna1;Target=FBgn0036242.1 12 343 +
Chr1	stalkie_big_nohaplotig	exon	159498586	159499098	99	+	.	Parent=FBgn0036242.1.mrna1;Target=FBgn0036242.1 344 856 +
Chr1	stalkie_big_nohaplotig	exon	159499158	159500170	99	+	.	Parent=FBgn0036242.1.mrna1;Target=FBgn0036242.1 857 1869 +
Chr1	stalkie_big_nohaplotig	CDS	159498196	159498526	.	+	0	Parent=FBgn0036242.1.mrna1;Target=FBgn0036242.1 13 343 +
Chr1	stalkie_big_nohaplotig	CDS	159498586	159499098	.	+	2	Parent=FBgn0036242.1.mrna1;Target=FBgn0036242.1 344 856 +
Chr1	stalkie_big_nohaplotig	CDS	159499158	159500170	.	+	2	Parent=FBgn0036242.1.mrna1;Target=FBgn0036242.1 857 1869 +
Chr1	gffcl	locus	159506972	159510528	.	+	.	ID=RLOC_00013026;geneIDs=FBgn0030170.1.path1;transcripts=FBgn0030170.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159506972	159510528	.	+	.	ID=FBgn0030170.1.mrna1;geneID=FBgn0030170.1.path1;Name=FBgn0030170.1;Dir=sensecoverage=100.0;identity=99.1;matches=3292;mismatches=28;indels=1;unknowns=0;Target=FBgn0030170.1 3 44 +;locus=RLOC_00013026
Chr1	stalkie_big_nohaplotig	exon	159506972	159507450	99	+	.	Parent=FBgn0030170.1.mrna1;Target=FBgn0030170.1 1 480 +
Chr1	stalkie_big_nohaplotig	exon	159507505	159507738	99	+	.	Parent=FBgn0030170.1.mrna1;Target=FBgn0030170.1 481 714 +
Chr1	stalkie_big_nohaplotig	exon	159507799	159508638	99	+	.	Parent=FBgn0030170.1.mrna1;Target=FBgn0030170.1 715 1554 +
Chr1	stalkie_big_nohaplotig	exon	159508707	159509112	98	+	.	Parent=FBgn0030170.1.mrna1;Target=FBgn0030170.1 1555 1960 +
Chr1	stalkie_big_nohaplotig	exon	159509168	159510528	98	+	.	Parent=FBgn0030170.1.mrna1;Target=FBgn0030170.1 1961 3321 +
Chr1	stalkie_big_nohaplotig	CDS	159506974	159507014	.	+	0	Parent=FBgn0030170.1.mrna1
Chr1	gffcl	locus	159515057	159597740	.	+	.	ID=RLOC_00013027;geneIDs=comp157394_c0_seq1.path1,comp160589_c0_seq1.path1,comp163632_c0_seq1.path1;transcripts=comp163632_c0_seq1.mrna1,comp157394_c0_seq1.mrna1,comp160589_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159515057	159597740	.	+	.	ID=comp163632_c0_seq1.mrna1;geneID=comp163632_c0_seq1.path1;Name=comp163632_c0_seq1;Dir=antisensecoverage=100.0;identity=83.9;matches=2744;mismatches=164;indels=361;unknowns=0;locus=RLOC_00013027
Chr1	stalkie_big_nohaplotig	exon	159515057	159515221	100	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 6033 6197 -
Chr1	stalkie_big_nohaplotig	exon	159518321	159518576	100	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 5777 6032 -
Chr1	stalkie_big_nohaplotig	exon	159520766	159520846	50	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 5675 5750 -
Chr1	stalkie_big_nohaplotig	exon	159524865	159524898	44	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 5630 5674 -
Chr1	stalkie_big_nohaplotig	exon	159534002	159534010	88	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 5621 5629 -
Chr1	stalkie_big_nohaplotig	exon	159535270	159535290	80	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 5600 5620 -
Chr1	stalkie_big_nohaplotig	exon	159537559	159537588	58	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 5565 5599 -
Chr1	stalkie_big_nohaplotig	exon	159537828	159537835	100	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 4919 4926 -
Chr1	stalkie_big_nohaplotig	exon	159537870	159537877	100	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 4791 4798 -
Chr1	stalkie_big_nohaplotig	exon	159537888	159537895	100	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 4657 4664 -
Chr1	stalkie_big_nohaplotig	exon	159538061	159538103	50	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 4211 4253 -
Chr1	stalkie_big_nohaplotig	exon	159539077	159539085	100	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 4201 4209 -
Chr1	stalkie_big_nohaplotig	exon	159539097	159539105	100	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 4089 4097 -
Chr1	stalkie_big_nohaplotig	exon	159539147	159539154	100	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 3592 3599 -
Chr1	stalkie_big_nohaplotig	exon	159539200	159539209	100	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 3281 3290 -
Chr1	stalkie_big_nohaplotig	exon	159539334	159539342	100	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 2993 3001 -
Chr1	stalkie_big_nohaplotig	exon	159539350	159539357	100	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 2791 2798 -
Chr1	stalkie_big_nohaplotig	exon	159539478	159539521	39	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 2437 2480 -
Chr1	stalkie_big_nohaplotig	exon	159545775	159545805	80	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 2373 2403 -
Chr1	stalkie_big_nohaplotig	exon	159545871	159545874	100	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 2369 2372 -
Chr1	stalkie_big_nohaplotig	exon	159545891	159545894	100	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 2308 2311 -
Chr1	stalkie_big_nohaplotig	exon	159547889	159547898	100	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 2297 2306 -
Chr1	stalkie_big_nohaplotig	exon	159547913	159547920	100	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 2244 2251 -
Chr1	stalkie_big_nohaplotig	exon	159547941	159547948	100	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 2202 2209 -
Chr1	stalkie_big_nohaplotig	exon	159555120	159555129	100	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 2097 2106 -
Chr1	stalkie_big_nohaplotig	exon	159574109	159574113	100	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 2092 2096 -
Chr1	stalkie_big_nohaplotig	exon	159578827	159578841	66	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 2082 2091 -
Chr1	stalkie_big_nohaplotig	exon	159586377	159586389	84	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 2069 2081 -
Chr1	stalkie_big_nohaplotig	exon	159591750	159591761	83	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 2057 2068 -
Chr1	stalkie_big_nohaplotig	exon	159591893	159591898	83	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 2051 2056 -
Chr1	stalkie_big_nohaplotig	exon	159592092	159592152	27	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 2029 2050 -
Chr1	stalkie_big_nohaplotig	exon	159592219	159592393	24	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 1969 2028 -
Chr1	stalkie_big_nohaplotig	exon	159592514	159592578	26	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 1946 1968 -
Chr1	stalkie_big_nohaplotig	exon	159592647	159592654	87	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 1938 1945 -
Chr1	stalkie_big_nohaplotig	exon	159592829	159592899	26	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 1916 1937 -
Chr1	stalkie_big_nohaplotig	exon	159593143	159593277	40	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 1838 1915 -
Chr1	stalkie_big_nohaplotig	exon	159594532	159595072	100	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 1297 1837 -
Chr1	stalkie_big_nohaplotig	exon	159596303	159596737	99	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 862 1296 -
Chr1	stalkie_big_nohaplotig	exon	159596825	159597099	96	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 578 861 -
Chr1	stalkie_big_nohaplotig	exon	159597166	159597740	99	+	.	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 1 577 -
Chr1	stalkie_big_nohaplotig	CDS	159596677	159596737	.	+	0	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 862 922 .
Chr1	stalkie_big_nohaplotig	CDS	159596825	159597099	.	+	2	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 578 861 .
Chr1	stalkie_big_nohaplotig	CDS	159597166	159597375	.	+	0	Parent=comp163632_c0_seq1.mrna1;Target=comp163632_c0_seq1 368 577 .
Chr1	stalkie_big_nohaplotig	mRNA	159575595	159580053	.	+	.	ID=comp157394_c0_seq1.mrna1;geneID=comp157394_c0_seq1.path1;Name=comp157394_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=4373;mismatches=86;indels=6;unknowns=0;Target=comp157394_c0_seq1 4465 1 .;CDS_Target=comp157394_c0_seq1 1678 1652 .;locus=RLOC_00013027
Chr1	stalkie_big_nohaplotig	exon	159575595	159580053	97	+	.	Parent=comp157394_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159577246	159577272	.	+	0	Parent=comp157394_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159591142	159592440	.	+	.	ID=comp160589_c0_seq1.mrna1;geneID=comp160589_c0_seq1.path1;Name=comp160589_c0_seq1;Dir=indeterminatecoverage=97.7;identity=97.3;matches=1283;mismatches=16;indels=19;unknowns=0;Target=comp160589_c0_seq1 1349 32 .;CDS_Target=comp160589_c0_seq1 488 381 .;locus=RLOC_00013027
Chr1	stalkie_big_nohaplotig	exon	159591142	159592440	97	+	.	Parent=comp160589_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159591491	159591596	.	+	0	Parent=comp160589_c0_seq1.mrna1
Chr1	gffcl	locus	159568936	159587175	.	-	.	ID=RLOC_00013028;geneIDs=FBgn0263132.path1,comp163396_c1_seq1.path1;transcripts=FBgn0263132.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159571835	159587175	.	-	.	ID=FBgn0263132.mrna1;geneID=FBgn0263132.path1;Name=FBgn0263132;Dir=sensecoverage=97.9;identity=99.7;matches=4769;mismatches=10;indels=6;unknowns=0;locus=RLOC_00013028
Chr1	stalkie_big_nohaplotig	exon	159571835	159572669	99	-	.	Parent=FBgn0263132.mrna1;Target=FBgn0263132 4036 4870 +
Chr1	stalkie_big_nohaplotig	exon	159582404	159583607	99	-	.	Parent=FBgn0263132.mrna1;Target=FBgn0263132 2838 4035 +
Chr1	stalkie_big_nohaplotig	exon	159583725	159584759	100	-	.	Parent=FBgn0263132.mrna1;Target=FBgn0263132 1803 2837 +
Chr1	stalkie_big_nohaplotig	exon	159584821	159585010	100	-	.	Parent=FBgn0263132.mrna1;Target=FBgn0263132 1613 1802 +
Chr1	stalkie_big_nohaplotig	exon	159585071	159585372	100	-	.	Parent=FBgn0263132.mrna1;Target=FBgn0263132 1311 1612 +
Chr1	stalkie_big_nohaplotig	exon	159585434	159585699	99	-	.	Parent=FBgn0263132.mrna1;Target=FBgn0263132 1045 1310 +
Chr1	stalkie_big_nohaplotig	exon	159585813	159585998	100	-	.	Parent=FBgn0263132.mrna1;Target=FBgn0263132 859 1044 +
Chr1	stalkie_big_nohaplotig	exon	159586054	159586568	100	-	.	Parent=FBgn0263132.mrna1;Target=FBgn0263132 344 858 +
Chr1	stalkie_big_nohaplotig	exon	159586739	159586924	99	-	.	Parent=FBgn0263132.mrna1;Target=FBgn0263132 158 343 +
Chr1	stalkie_big_nohaplotig	exon	159587110	159587175	98	-	.	Parent=FBgn0263132.mrna1;Target=FBgn0263132 92 157 +
Chr1	stalkie_big_nohaplotig	CDS	159571836	159572669	.	-	0	Parent=FBgn0263132.mrna1;Target=FBgn0263132 4036 4869 +
Chr1	stalkie_big_nohaplotig	CDS	159582404	159583607	.	-	1	Parent=FBgn0263132.mrna1;Target=FBgn0263132 2838 4035 +
Chr1	stalkie_big_nohaplotig	CDS	159583725	159584759	.	-	1	Parent=FBgn0263132.mrna1;Target=FBgn0263132 1803 2837 +
Chr1	stalkie_big_nohaplotig	CDS	159584821	159585010	.	-	2	Parent=FBgn0263132.mrna1;Target=FBgn0263132 1613 1802 +
Chr1	stalkie_big_nohaplotig	CDS	159585071	159585372	.	-	1	Parent=FBgn0263132.mrna1;Target=FBgn0263132 1311 1612 +
Chr1	stalkie_big_nohaplotig	CDS	159585434	159585699	.	-	0	Parent=FBgn0263132.mrna1;Target=FBgn0263132 1045 1310 +
Chr1	stalkie_big_nohaplotig	CDS	159585813	159585998	.	-	0	Parent=FBgn0263132.mrna1;Target=FBgn0263132 859 1044 +
Chr1	stalkie_big_nohaplotig	CDS	159586054	159586568	.	-	2	Parent=FBgn0263132.mrna1;Target=FBgn0263132 344 858 +
Chr1	stalkie_big_nohaplotig	CDS	159586739	159586924	.	-	2	Parent=FBgn0263132.mrna1;Target=FBgn0263132 158 343 +
Chr1	stalkie_big_nohaplotig	CDS	159587110	159587173	.	-	0	Parent=FBgn0263132.mrna1;Target=FBgn0263132 94 157 +
Chr1	gffcl	locus	159590179	159590943	.	+	.	ID=RLOC_00013029;geneIDs=comp155181_c0_seq1.path1;transcripts=comp155181_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159590179	159590943	.	+	.	ID=comp155181_c0_seq1.mrna1;geneID=comp155181_c0_seq1.path1;Name=comp155181_c0_seq1;Dir=indeterminatecoverage=88.4;identity=89.4;matches=684;mismatches=53;indels=28;unknowns=0;Target=comp155181_c0_seq1 745 9 .;CDS_Target=comp155181_c0_seq1 103 11 .;locus=RLOC_00013029
Chr1	stalkie_big_nohaplotig	exon	159590179	159590943	89	+	.	Parent=comp155181_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159590181	159590273	.	+	0	Parent=comp155181_c0_seq1.mrna1
Chr1	gffcl	locus	159604422	159605788	.	+	.	ID=RLOC_00013030;geneIDs=FBgn0004045.1.path1;transcripts=FBgn0004045.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159604422	159605788	.	+	.	ID=FBgn0004045.1.mrna1;geneID=FBgn0004045.1.path1;Name=FBgn0004045.1;Dir=sensecoverage=100.0;identity=99.4;matches=1291;mismatches=8;indels=0;unknowns=0;locus=RLOC_00013030
Chr1	stalkie_big_nohaplotig	exon	159604422	159604650	99	+	.	Parent=FBgn0004045.1.mrna1;Target=FBgn0004045.1 1 229 +
Chr1	stalkie_big_nohaplotig	exon	159604719	159605788	99	+	.	Parent=FBgn0004045.1.mrna1;Target=FBgn0004045.1 230 1299 +
Chr1	stalkie_big_nohaplotig	CDS	159604422	159604650	.	+	0	Parent=FBgn0004045.1.mrna1;Target=FBgn0004045.1 1 229 +
Chr1	stalkie_big_nohaplotig	CDS	159604719	159605788	.	+	2	Parent=FBgn0004045.1.mrna1;Target=FBgn0004045.1 230 1299 +
Chr1	gffcl	locus	159607187	159612035	.	+	.	ID=RLOC_00013031;geneIDs=FBgn0031070.1.path1;transcripts=FBgn0031070.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159607187	159612035	.	+	.	ID=FBgn0031070.1.mrna1;geneID=FBgn0031070.1.path1;Name=FBgn0031070.1;Dir=sensecoverage=99.9;identity=99.4;matches=2496;mismatches=16;indels=0;unknowns=0;locus=RLOC_00013031
Chr1	stalkie_big_nohaplotig	exon	159607187	159608075	99	+	.	Parent=FBgn0031070.1.mrna1;Target=FBgn0031070.1 3 891 +
Chr1	stalkie_big_nohaplotig	exon	159608138	159608393	99	+	.	Parent=FBgn0031070.1.mrna1;Target=FBgn0031070.1 892 1147 +
Chr1	stalkie_big_nohaplotig	exon	159608452	159608918	99	+	.	Parent=FBgn0031070.1.mrna1;Target=FBgn0031070.1 1148 1614 +
Chr1	stalkie_big_nohaplotig	exon	159608988	159609272	99	+	.	Parent=FBgn0031070.1.mrna1;Target=FBgn0031070.1 1615 1899 +
Chr1	stalkie_big_nohaplotig	exon	159609327	159609418	100	+	.	Parent=FBgn0031070.1.mrna1;Target=FBgn0031070.1 1900 1991 +
Chr1	stalkie_big_nohaplotig	exon	159610455	159610600	95	+	.	Parent=FBgn0031070.1.mrna1;Target=FBgn0031070.1 1992 2137 +
Chr1	stalkie_big_nohaplotig	exon	159610666	159610754	98	+	.	Parent=FBgn0031070.1.mrna1;Target=FBgn0031070.1 2138 2226 +
Chr1	stalkie_big_nohaplotig	exon	159611748	159612035	100	+	.	Parent=FBgn0031070.1.mrna1;Target=FBgn0031070.1 2227 2514 +
Chr1	stalkie_big_nohaplotig	CDS	159607188	159608075	.	+	0	Parent=FBgn0031070.1.mrna1;Target=FBgn0031070.1 4 891 +
Chr1	stalkie_big_nohaplotig	CDS	159608138	159608393	.	+	0	Parent=FBgn0031070.1.mrna1;Target=FBgn0031070.1 892 1147 +
Chr1	stalkie_big_nohaplotig	CDS	159608452	159608918	.	+	2	Parent=FBgn0031070.1.mrna1;Target=FBgn0031070.1 1148 1614 +
Chr1	stalkie_big_nohaplotig	CDS	159608988	159609272	.	+	0	Parent=FBgn0031070.1.mrna1;Target=FBgn0031070.1 1615 1899 +
Chr1	stalkie_big_nohaplotig	CDS	159609327	159609418	.	+	0	Parent=FBgn0031070.1.mrna1;Target=FBgn0031070.1 1900 1991 +
Chr1	stalkie_big_nohaplotig	CDS	159610455	159610600	.	+	1	Parent=FBgn0031070.1.mrna1;Target=FBgn0031070.1 1992 2137 +
Chr1	stalkie_big_nohaplotig	CDS	159610666	159610754	.	+	2	Parent=FBgn0031070.1.mrna1;Target=FBgn0031070.1 2138 2226 +
Chr1	stalkie_big_nohaplotig	CDS	159611748	159612035	.	+	0	Parent=FBgn0031070.1.mrna1;Target=FBgn0031070.1 2227 2514 +
Chr1	gffcl	locus	159612741	159614024	.	-	.	ID=RLOC_00013032;geneIDs=FBgn0020909.1.path1;transcripts=FBgn0020909.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159612741	159614024	.	-	.	ID=FBgn0020909.1.mrna1;geneID=FBgn0020909.1.path1;Name=FBgn0020909.1;Dir=sensecoverage=100.0;identity=99.3;matches=1144;mismatches=8;indels=0;unknowns=0;locus=RLOC_00013032
Chr1	stalkie_big_nohaplotig	exon	159612741	159612916	99	-	.	Parent=FBgn0020909.1.mrna1;Target=FBgn0020909.1 977 1152 +
Chr1	stalkie_big_nohaplotig	exon	159612981	159613134	99	-	.	Parent=FBgn0020909.1.mrna1;Target=FBgn0020909.1 823 976 +
Chr1	stalkie_big_nohaplotig	exon	159613203	159614024	99	-	.	Parent=FBgn0020909.1.mrna1;Target=FBgn0020909.1 1 822 +
Chr1	stalkie_big_nohaplotig	CDS	159612741	159612916	.	-	2	Parent=FBgn0020909.1.mrna1;Target=FBgn0020909.1 977 1152 +
Chr1	stalkie_big_nohaplotig	CDS	159612981	159613134	.	-	0	Parent=FBgn0020909.1.mrna1;Target=FBgn0020909.1 823 976 +
Chr1	stalkie_big_nohaplotig	CDS	159613203	159614024	.	-	0	Parent=FBgn0020909.1.mrna1;Target=FBgn0020909.1 1 822 +
Chr1	gffcl	locus	159615601	159618461	.	+	.	ID=RLOC_00013033;geneIDs=AAEL007663.2.path1;transcripts=AAEL007663.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159615601	159618461	.	+	.	ID=AAEL007663.2.mrna1;geneID=AAEL007663.2.path1;Name=AAEL007663.2;Dir=sensecoverage=100.0;identity=99.2;matches=2652;mismatches=21;indels=0;unknowns=0;locus=RLOC_00013033
Chr1	stalkie_big_nohaplotig	exon	159615601	159615754	99	+	.	Parent=AAEL007663.2.mrna1;Target=AAEL007663.2 1 154 +
Chr1	stalkie_big_nohaplotig	exon	159615812	159617746	99	+	.	Parent=AAEL007663.2.mrna1;Target=AAEL007663.2 155 2089 +
Chr1	stalkie_big_nohaplotig	exon	159617817	159617980	98	+	.	Parent=AAEL007663.2.mrna1;Target=AAEL007663.2 2090 2253 +
Chr1	stalkie_big_nohaplotig	exon	159618042	159618461	99	+	.	Parent=AAEL007663.2.mrna1;Target=AAEL007663.2 2254 2673 +
Chr1	stalkie_big_nohaplotig	CDS	159615601	159615754	.	+	0	Parent=AAEL007663.2.mrna1;Target=AAEL007663.2 1 154 +
Chr1	stalkie_big_nohaplotig	CDS	159615812	159617746	.	+	2	Parent=AAEL007663.2.mrna1;Target=AAEL007663.2 155 2089 +
Chr1	stalkie_big_nohaplotig	CDS	159617817	159617980	.	+	2	Parent=AAEL007663.2.mrna1;Target=AAEL007663.2 2090 2253 +
Chr1	stalkie_big_nohaplotig	CDS	159618042	159618461	.	+	0	Parent=AAEL007663.2.mrna1;Target=AAEL007663.2 2254 2673 +
Chr1	gffcl	locus	159619110	159619911	.	+	.	ID=RLOC_00013034;geneIDs=ORF2651.path1;transcripts=ORF2651.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159619110	159619911	.	+	.	ID=ORF2651.mrna1;geneID=ORF2651.path1;Name=ORF2651;Dir=sensecoverage=100.0;identity=90.3;matches=748;mismatches=1;indels=79;unknowns=0;Target=ORF2651 42 128 +;locus=RLOC_00013034
Chr1	stalkie_big_nohaplotig	exon	159619110	159619318	99	+	.	Parent=ORF2651.mrna1;Target=ORF2651 1 210 +
Chr1	stalkie_big_nohaplotig	exon	159619372	159619911	87	+	.	Parent=ORF2651.mrna1;Target=ORF2651 211 828 +
Chr1	stalkie_big_nohaplotig	CDS	159619151	159619236	.	+	0	Parent=ORF2651.mrna1
Chr1	gffcl	locus	159621018	159621967	.	+	.	ID=RLOC_00013035;geneIDs=FBgn0030616.1.path1;transcripts=FBgn0030616.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159621018	159621967	.	+	.	ID=FBgn0030616.1.mrna1;geneID=FBgn0030616.1.path1;Name=FBgn0030616.1;Dir=sensecoverage=100.0;identity=99.7;matches=326;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013035
Chr1	stalkie_big_nohaplotig	exon	159621018	159621068	100	+	.	Parent=FBgn0030616.1.mrna1;Target=FBgn0030616.1 1 51 +
Chr1	stalkie_big_nohaplotig	exon	159621362	159621497	100	+	.	Parent=FBgn0030616.1.mrna1;Target=FBgn0030616.1 52 187 +
Chr1	stalkie_big_nohaplotig	exon	159621828	159621967	99	+	.	Parent=FBgn0030616.1.mrna1;Target=FBgn0030616.1 188 327 +
Chr1	stalkie_big_nohaplotig	CDS	159621018	159621068	.	+	0	Parent=FBgn0030616.1.mrna1;Target=FBgn0030616.1 1 51 +
Chr1	stalkie_big_nohaplotig	CDS	159621362	159621497	.	+	0	Parent=FBgn0030616.1.mrna1;Target=FBgn0030616.1 52 187 +
Chr1	stalkie_big_nohaplotig	CDS	159621828	159621967	.	+	2	Parent=FBgn0030616.1.mrna1;Target=FBgn0030616.1 188 327 +
Chr1	gffcl	locus	159625204	159653640	.	-	.	ID=RLOC_00013036;geneIDs=FBgn0260006.1.path1;transcripts=FBgn0260006.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159625204	159653640	.	-	.	ID=FBgn0260006.1.mrna1;geneID=FBgn0260006.1.path1;Name=FBgn0260006.1;Dir=sensecoverage=100.0;identity=99.6;matches=2521;mismatches=11;indels=0;unknowns=0;locus=RLOC_00013036
Chr1	stalkie_big_nohaplotig	exon	159625204	159625482	99	-	.	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 2254 2532 +
Chr1	stalkie_big_nohaplotig	exon	159625554	159625702	100	-	.	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 2105 2253 +
Chr1	stalkie_big_nohaplotig	exon	159625768	159626084	100	-	.	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 1788 2104 +
Chr1	stalkie_big_nohaplotig	exon	159626149	159626342	97	-	.	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 1594 1787 +
Chr1	stalkie_big_nohaplotig	exon	159626402	159626570	100	-	.	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 1425 1593 +
Chr1	stalkie_big_nohaplotig	exon	159627175	159627335	99	-	.	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 1264 1424 +
Chr1	stalkie_big_nohaplotig	exon	159627402	159627586	100	-	.	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 1079 1263 +
Chr1	stalkie_big_nohaplotig	exon	159627648	159627724	100	-	.	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 1002 1078 +
Chr1	stalkie_big_nohaplotig	exon	159628286	159628494	98	-	.	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 793 1001 +
Chr1	stalkie_big_nohaplotig	exon	159632912	159633162	100	-	.	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 542 792 +
Chr1	stalkie_big_nohaplotig	exon	159639657	159639803	100	-	.	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 395 541 +
Chr1	stalkie_big_nohaplotig	exon	159653247	159653640	99	-	.	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 1 394 +
Chr1	stalkie_big_nohaplotig	CDS	159625204	159625482	.	-	0	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 2254 2532 +
Chr1	stalkie_big_nohaplotig	CDS	159625554	159625702	.	-	2	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 2105 2253 +
Chr1	stalkie_big_nohaplotig	CDS	159625768	159626084	.	-	1	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 1788 2104 +
Chr1	stalkie_big_nohaplotig	CDS	159626149	159626342	.	-	0	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 1594 1787 +
Chr1	stalkie_big_nohaplotig	CDS	159626402	159626570	.	-	1	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 1425 1593 +
Chr1	stalkie_big_nohaplotig	CDS	159627175	159627335	.	-	0	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 1264 1424 +
Chr1	stalkie_big_nohaplotig	CDS	159627402	159627586	.	-	2	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 1079 1263 +
Chr1	stalkie_big_nohaplotig	CDS	159627648	159627724	.	-	1	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 1002 1078 +
Chr1	stalkie_big_nohaplotig	CDS	159628286	159628494	.	-	0	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 793 1001 +
Chr1	stalkie_big_nohaplotig	CDS	159632912	159633162	.	-	2	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 542 792 +
Chr1	stalkie_big_nohaplotig	CDS	159639657	159639803	.	-	2	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 395 541 +
Chr1	stalkie_big_nohaplotig	CDS	159653247	159653640	.	-	0	Parent=FBgn0260006.1.mrna1;Target=FBgn0260006.1 1 394 +
Chr1	gffcl	locus	159673938	159700141	.	+	.	ID=RLOC_00013037;geneIDs=comp153419_c1_seq1.path1;transcripts=comp153419_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159673938	159700141	.	+	.	ID=comp153419_c1_seq1.mrna1;geneID=comp153419_c1_seq1.path1;Name=comp153419_c1_seq1;Dir=indeterminatecoverage=39.3;identity=100.0;matches=216;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013037
Chr1	stalkie_big_nohaplotig	exon	159673938	159673943	100	+	.	Parent=comp153419_c1_seq1.mrna1;Target=comp153419_c1_seq1 341 336 .
Chr1	stalkie_big_nohaplotig	exon	159680679	159680684	100	+	.	Parent=comp153419_c1_seq1.mrna1;Target=comp153419_c1_seq1 347 342 .
Chr1	stalkie_big_nohaplotig	exon	159687006	159687008	100	+	.	Parent=comp153419_c1_seq1.mrna1;Target=comp153419_c1_seq1 350 348 .
Chr1	stalkie_big_nohaplotig	exon	159699942	159700141	100	+	.	Parent=comp153419_c1_seq1.mrna1;Target=comp153419_c1_seq1 550 351 .
Chr1	stalkie_big_nohaplotig	CDS	159673939	159673943	.	+	0	Parent=comp153419_c1_seq1.mrna1;Target=comp153419_c1_seq1 341 337 .
Chr1	stalkie_big_nohaplotig	CDS	159680679	159680684	.	+	1	Parent=comp153419_c1_seq1.mrna1;Target=comp153419_c1_seq1 347 342 .
Chr1	stalkie_big_nohaplotig	CDS	159687006	159687008	.	+	1	Parent=comp153419_c1_seq1.mrna1;Target=comp153419_c1_seq1 350 348 .
Chr1	stalkie_big_nohaplotig	CDS	159699942	159699969	.	+	1	Parent=comp153419_c1_seq1.mrna1;Target=comp153419_c1_seq1 378 351 .
Chr1	gffcl	locus	159681317	159688323	.	-	.	ID=RLOC_00013038;geneIDs=FBgn0030615.1.path1;transcripts=FBgn0030615.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159681317	159688323	.	-	.	ID=FBgn0030615.1.mrna1;geneID=FBgn0030615.1.path1;Name=FBgn0030615.1;Dir=sensecoverage=100.0;identity=99.8;matches=1443;mismatches=2;indels=1;unknowns=0;locus=RLOC_00013038
Chr1	stalkie_big_nohaplotig	exon	159681317	159681468	100	-	.	Parent=FBgn0030615.1.mrna1;Target=FBgn0030615.1 1295 1446 +
Chr1	stalkie_big_nohaplotig	exon	159681531	159682237	100	-	.	Parent=FBgn0030615.1.mrna1;Target=FBgn0030615.1 588 1294 +
Chr1	stalkie_big_nohaplotig	exon	159682310	159682763	100	-	.	Parent=FBgn0030615.1.mrna1;Target=FBgn0030615.1 134 587 +
Chr1	stalkie_big_nohaplotig	exon	159688192	159688323	97	-	.	Parent=FBgn0030615.1.mrna1;Target=FBgn0030615.1 1 133 +
Chr1	stalkie_big_nohaplotig	CDS	159682733	159682763	.	-	2	Parent=FBgn0030615.1.mrna1;Target=FBgn0030615.1 134 164 +
Chr1	stalkie_big_nohaplotig	CDS	159688192	159688321	.	-	0	Parent=FBgn0030615.1.mrna1;Target=FBgn0030615.1 3 133 +
Chr1	gffcl	locus	159685667	159686125	.	-	.	ID=RLOC_00013039;geneIDs=comp136631_c0_seq1.path1;transcripts=comp136631_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159685667	159686125	.	-	.	ID=comp136631_c0_seq1.mrna1;geneID=comp136631_c0_seq1.path1;Name=comp136631_c0_seq1;Dir=indeterminatecoverage=60.8;identity=94.6;matches=434;mismatches=20;indels=5;unknowns=0;Target=comp136631_c0_seq1 454 1 .;CDS_Target=comp136631_c0_seq1 257 3 .;locus=RLOC_00013039
Chr1	stalkie_big_nohaplotig	exon	159685667	159686125	94	-	.	Parent=comp136631_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159685867	159686123	.	-	0	Parent=comp136631_c0_seq1.mrna1
Chr1	gffcl	locus	159690036	159690899	.	+	.	ID=RLOC_00013040;geneIDs=comp161308_c0_seq1.path1;transcripts=comp161308_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159690036	159690899	.	+	.	ID=comp161308_c0_seq1.mrna1;geneID=comp161308_c0_seq1.path1;Name=comp161308_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=844;mismatches=19;indels=5;unknowns=0;Target=comp161308_c0_seq1 867 1 .;CDS_Target=comp161308_c0_seq1 805 695 .;locus=RLOC_00013040
Chr1	stalkie_big_nohaplotig	exon	159690036	159690899	97	+	.	Parent=comp161308_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159690731	159690837	.	+	0	Parent=comp161308_c0_seq1.mrna1
Chr1	gffcl	locus	159698133	159699914	.	-	.	ID=RLOC_00013041;geneIDs=FBgn0031549.2.path1;transcripts=FBgn0031549.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159698133	159699914	.	-	.	ID=FBgn0031549.2.mrna1;geneID=FBgn0031549.2.path1;Name=FBgn0031549.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1782;mismatches=0;indels=0;unknowns=0;Target=FBgn0031549.2 1782 1 .;locus=RLOC_00013041
Chr1	stalkie_big_nohaplotig	exon	159698133	159699914	100	-	.	Parent=FBgn0031549.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159698133	159699914	.	-	0	Parent=FBgn0031549.2.mrna1
Chr1	gffcl	locus	159708498	159721906	.	-	.	ID=RLOC_00013042;geneIDs=FBgn0030613.path1,comp163828_c0_seq1.path1;transcripts=FBgn0030613.mrna1,comp163828_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159708498	159721841	.	-	.	ID=FBgn0030613.mrna1;geneID=FBgn0030613.path1;Name=FBgn0030613;Dir=sensecoverage=100.0;identity=99.3;matches=2876;mismatches=19;indels=0;unknowns=0;locus=RLOC_00013042
Chr1	stalkie_big_nohaplotig	exon	159708498	159708518	100	-	.	Parent=FBgn0030613.mrna1;Target=FBgn0030613 2875 2895 +
Chr1	stalkie_big_nohaplotig	exon	159714993	159715196	99	-	.	Parent=FBgn0030613.mrna1;Target=FBgn0030613 2671 2874 +
Chr1	stalkie_big_nohaplotig	exon	159715262	159716152	99	-	.	Parent=FBgn0030613.mrna1;Target=FBgn0030613 1780 2670 +
Chr1	stalkie_big_nohaplotig	exon	159716239	159716422	99	-	.	Parent=FBgn0030613.mrna1;Target=FBgn0030613 1596 1779 +
Chr1	stalkie_big_nohaplotig	exon	159716527	159716621	100	-	.	Parent=FBgn0030613.mrna1;Target=FBgn0030613 1501 1595 +
Chr1	stalkie_big_nohaplotig	exon	159719290	159719416	99	-	.	Parent=FBgn0030613.mrna1;Target=FBgn0030613 1374 1500 +
Chr1	stalkie_big_nohaplotig	exon	159720045	159720406	98	-	.	Parent=FBgn0030613.mrna1;Target=FBgn0030613 1012 1373 +
Chr1	stalkie_big_nohaplotig	exon	159720482	159720626	100	-	.	Parent=FBgn0030613.mrna1;Target=FBgn0030613 867 1011 +
Chr1	stalkie_big_nohaplotig	exon	159720690	159721058	100	-	.	Parent=FBgn0030613.mrna1;Target=FBgn0030613 498 866 +
Chr1	stalkie_big_nohaplotig	exon	159721178	159721542	98	-	.	Parent=FBgn0030613.mrna1;Target=FBgn0030613 133 497 +
Chr1	stalkie_big_nohaplotig	exon	159721710	159721841	99	-	.	Parent=FBgn0030613.mrna1;Target=FBgn0030613 1 132 +
Chr1	stalkie_big_nohaplotig	CDS	159708498	159708518	.	-	0	Parent=FBgn0030613.mrna1;Target=FBgn0030613 2875 2895 +
Chr1	stalkie_big_nohaplotig	CDS	159714993	159715196	.	-	0	Parent=FBgn0030613.mrna1;Target=FBgn0030613 2671 2874 +
Chr1	stalkie_big_nohaplotig	CDS	159715262	159716152	.	-	0	Parent=FBgn0030613.mrna1;Target=FBgn0030613 1780 2670 +
Chr1	stalkie_big_nohaplotig	CDS	159716239	159716422	.	-	1	Parent=FBgn0030613.mrna1;Target=FBgn0030613 1596 1779 +
Chr1	stalkie_big_nohaplotig	CDS	159716527	159716621	.	-	0	Parent=FBgn0030613.mrna1;Target=FBgn0030613 1501 1595 +
Chr1	stalkie_big_nohaplotig	CDS	159719290	159719416	.	-	1	Parent=FBgn0030613.mrna1;Target=FBgn0030613 1374 1500 +
Chr1	stalkie_big_nohaplotig	CDS	159720045	159720406	.	-	0	Parent=FBgn0030613.mrna1;Target=FBgn0030613 1012 1373 +
Chr1	stalkie_big_nohaplotig	CDS	159720482	159720626	.	-	1	Parent=FBgn0030613.mrna1;Target=FBgn0030613 867 1011 +
Chr1	stalkie_big_nohaplotig	CDS	159720690	159721058	.	-	1	Parent=FBgn0030613.mrna1;Target=FBgn0030613 498 866 +
Chr1	stalkie_big_nohaplotig	CDS	159721178	159721542	.	-	0	Parent=FBgn0030613.mrna1;Target=FBgn0030613 133 497 +
Chr1	stalkie_big_nohaplotig	CDS	159721710	159721841	.	-	0	Parent=FBgn0030613.mrna1;Target=FBgn0030613 1 132 +
Chr1	stalkie_big_nohaplotig	mRNA	159708498	159721906	.	-	.	ID=comp163828_c0_seq1.mrna1;geneID=comp163828_c0_seq1.path1;Name=comp163828_c0_seq1;Dir=sensecoverage=98.2;identity=99.3;matches=3035;mismatches=21;indels=0;unknowns=0;locus=RLOC_00013042
Chr1	stalkie_big_nohaplotig	exon	159708498	159708518	100	-	.	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 3091 3111 +
Chr1	stalkie_big_nohaplotig	exon	159714758	159714820	98	-	.	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 3028 3090 +
Chr1	stalkie_big_nohaplotig	exon	159714993	159715196	99	-	.	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 2824 3027 +
Chr1	stalkie_big_nohaplotig	exon	159715262	159716152	99	-	.	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 1933 2823 +
Chr1	stalkie_big_nohaplotig	exon	159716239	159716422	99	-	.	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 1749 1932 +
Chr1	stalkie_big_nohaplotig	exon	159716527	159716621	100	-	.	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 1654 1748 +
Chr1	stalkie_big_nohaplotig	exon	159718541	159718573	100	-	.	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 1621 1653 +
Chr1	stalkie_big_nohaplotig	exon	159719290	159719416	99	-	.	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 1494 1620 +
Chr1	stalkie_big_nohaplotig	exon	159720045	159720406	98	-	.	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 1132 1493 +
Chr1	stalkie_big_nohaplotig	exon	159720482	159720626	100	-	.	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 987 1131 +
Chr1	stalkie_big_nohaplotig	exon	159720690	159721058	100	-	.	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 618 986 +
Chr1	stalkie_big_nohaplotig	exon	159721178	159721542	98	-	.	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 253 617 +
Chr1	stalkie_big_nohaplotig	exon	159721710	159721906	98	-	.	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 56 252 +
Chr1	stalkie_big_nohaplotig	CDS	159708498	159708518	.	-	0	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 3091 3111 +
Chr1	stalkie_big_nohaplotig	CDS	159714758	159714820	.	-	0	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 3028 3090 +
Chr1	stalkie_big_nohaplotig	CDS	159714993	159715196	.	-	0	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 2824 3027 +
Chr1	stalkie_big_nohaplotig	CDS	159715262	159716152	.	-	0	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 1933 2823 +
Chr1	stalkie_big_nohaplotig	CDS	159716239	159716422	.	-	1	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 1749 1932 +
Chr1	stalkie_big_nohaplotig	CDS	159716527	159716621	.	-	0	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 1654 1748 +
Chr1	stalkie_big_nohaplotig	CDS	159718541	159718573	.	-	0	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 1621 1653 +
Chr1	stalkie_big_nohaplotig	CDS	159719290	159719416	.	-	1	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 1494 1620 +
Chr1	stalkie_big_nohaplotig	CDS	159720045	159720406	.	-	0	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 1132 1493 +
Chr1	stalkie_big_nohaplotig	CDS	159720482	159720626	.	-	1	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 987 1131 +
Chr1	stalkie_big_nohaplotig	CDS	159720690	159721058	.	-	1	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 618 986 +
Chr1	stalkie_big_nohaplotig	CDS	159721178	159721542	.	-	0	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 253 617 +
Chr1	stalkie_big_nohaplotig	CDS	159721710	159721832	.	-	0	Parent=comp163828_c0_seq1.mrna1;Target=comp163828_c0_seq1 130 252 +
Chr1	gffcl	locus	159758759	159761778	.	-	.	ID=RLOC_00013044;geneIDs=FBgn0030612.1.path1;transcripts=FBgn0030612.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159758759	159761778	.	-	.	ID=FBgn0030612.1.mrna1;geneID=FBgn0030612.1.path1;Name=FBgn0030612.1;Dir=sensecoverage=100.0;identity=99.6;matches=1414;mismatches=5;indels=0;unknowns=0;locus=RLOC_00013044
Chr1	stalkie_big_nohaplotig	exon	159758759	159758917	99	-	.	Parent=FBgn0030612.1.mrna1;Target=FBgn0030612.1 1261 1419 +
Chr1	stalkie_big_nohaplotig	exon	159758982	159759053	100	-	.	Parent=FBgn0030612.1.mrna1;Target=FBgn0030612.1 1189 1260 +
Chr1	stalkie_big_nohaplotig	exon	159759111	159759509	100	-	.	Parent=FBgn0030612.1.mrna1;Target=FBgn0030612.1 790 1188 +
Chr1	stalkie_big_nohaplotig	exon	159759572	159760166	99	-	.	Parent=FBgn0030612.1.mrna1;Target=FBgn0030612.1 195 789 +
Chr1	stalkie_big_nohaplotig	exon	159760233	159760345	99	-	.	Parent=FBgn0030612.1.mrna1;Target=FBgn0030612.1 82 194 +
Chr1	stalkie_big_nohaplotig	exon	159761698	159761778	100	-	.	Parent=FBgn0030612.1.mrna1;Target=FBgn0030612.1 1 81 +
Chr1	stalkie_big_nohaplotig	CDS	159758759	159758917	.	-	0	Parent=FBgn0030612.1.mrna1;Target=FBgn0030612.1 1261 1419 +
Chr1	stalkie_big_nohaplotig	CDS	159758982	159759053	.	-	0	Parent=FBgn0030612.1.mrna1;Target=FBgn0030612.1 1189 1260 +
Chr1	stalkie_big_nohaplotig	CDS	159759111	159759509	.	-	0	Parent=FBgn0030612.1.mrna1;Target=FBgn0030612.1 790 1188 +
Chr1	stalkie_big_nohaplotig	CDS	159759572	159760166	.	-	1	Parent=FBgn0030612.1.mrna1;Target=FBgn0030612.1 195 789 +
Chr1	stalkie_big_nohaplotig	CDS	159760233	159760345	.	-	0	Parent=FBgn0030612.1.mrna1;Target=FBgn0030612.1 82 194 +
Chr1	stalkie_big_nohaplotig	CDS	159761698	159761778	.	-	0	Parent=FBgn0030612.1.mrna1;Target=FBgn0030612.1 1 81 +
Chr1	gffcl	locus	159763766	159763909	.	+	.	ID=RLOC_00013045;geneIDs=comp349085_c0_seq1.path1;transcripts=comp349085_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159763766	159763909	.	+	.	ID=comp349085_c0_seq1.mrna1;geneID=comp349085_c0_seq1.path1;Name=comp349085_c0_seq1;Dir=indeterminatecoverage=71.2;identity=92.6;matches=137;mismatches=7;indels=4;unknowns=0;Target=comp349085_c0_seq1 148 1 .;CDS_Target=comp349085_c0_seq1 102 1 .;locus=RLOC_00013045
Chr1	stalkie_big_nohaplotig	exon	159763766	159763909	92	+	.	Parent=comp349085_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159763766	159763865	.	+	0	Parent=comp349085_c0_seq1.mrna1
Chr1	gffcl	locus	159764093	159764734	.	+	.	ID=RLOC_00013046;geneIDs=FBgn0030611.1.path1;transcripts=FBgn0030611.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159764093	159764734	.	+	.	ID=FBgn0030611.1.mrna1;geneID=FBgn0030611.1.path1;Name=FBgn0030611.1;Dir=sensecoverage=100.0;identity=99.3;matches=572;mismatches=3;indels=1;unknowns=0;Target=FBgn0030611.1 3 92 +;locus=RLOC_00013046
Chr1	stalkie_big_nohaplotig	exon	159764093	159764464	99	+	.	Parent=FBgn0030611.1.mrna1;Target=FBgn0030611.1 1 373 +
Chr1	stalkie_big_nohaplotig	exon	159764532	159764734	99	+	.	Parent=FBgn0030611.1.mrna1;Target=FBgn0030611.1 374 576 +
Chr1	stalkie_big_nohaplotig	CDS	159764095	159764183	.	+	0	Parent=FBgn0030611.1.mrna1
Chr1	gffcl	locus	159766197	159766966	.	+	.	ID=RLOC_00013047;geneIDs=comp157207_c0_seq1.path1;transcripts=comp157207_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159766197	159766966	.	+	.	ID=comp157207_c0_seq1.mrna1;geneID=comp157207_c0_seq1.path1;Name=comp157207_c0_seq1;Dir=sensecoverage=97.1;identity=98.7;matches=700;mismatches=6;indels=3;unknowns=0;locus=RLOC_00013047
Chr1	stalkie_big_nohaplotig	exon	159766197	159766558	99	+	.	Parent=comp157207_c0_seq1.mrna1;Target=comp157207_c0_seq1 1 362 +
Chr1	stalkie_big_nohaplotig	exon	159766623	159766966	98	+	.	Parent=comp157207_c0_seq1.mrna1;Target=comp157207_c0_seq1 363 709 +
Chr1	stalkie_big_nohaplotig	CDS	159766434	159766558	.	+	0	Parent=comp157207_c0_seq1.mrna1;Target=comp157207_c0_seq1 238 362 +
Chr1	stalkie_big_nohaplotig	CDS	159766623	159766707	.	+	1	Parent=comp157207_c0_seq1.mrna1;Target=comp157207_c0_seq1 363 447 +
Chr1	gffcl	locus	159767287	159767371	.	-	.	ID=RLOC_00013048;geneIDs=comp156022_c0_seq1.path2;transcripts=comp156022_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	159767287	159767371	.	-	.	ID=comp156022_c0_seq1.mrna2;geneID=comp156022_c0_seq1.path2;Name=comp156022_c0_seq1;Dir=indeterminatecoverage=17.6;identity=94.1;matches=80;mismatches=5;indels=0;unknowns=0;Target=comp156022_c0_seq1 392 308 .;locus=RLOC_00013048
Chr1	stalkie_big_nohaplotig	exon	159767287	159767371	94	-	.	Parent=comp156022_c0_seq1.mrna2
Chr1	gffcl	locus	159770638	159773418	.	-	.	ID=RLOC_00013050;geneIDs=FBgn0053178.1.path1;transcripts=FBgn0053178.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159770638	159773418	.	-	.	ID=FBgn0053178.1.mrna1;geneID=FBgn0053178.1.path1;Name=FBgn0053178.1;Dir=sensecoverage=99.8;identity=99.8;matches=499;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013050
Chr1	stalkie_big_nohaplotig	exon	159770638	159770887	99	-	.	Parent=FBgn0053178.1.mrna1;Target=FBgn0053178.1 252 501 +
Chr1	stalkie_big_nohaplotig	exon	159772418	159772500	100	-	.	Parent=FBgn0053178.1.mrna1;Target=FBgn0053178.1 169 251 +
Chr1	stalkie_big_nohaplotig	exon	159773252	159773418	100	-	.	Parent=FBgn0053178.1.mrna1;Target=FBgn0053178.1 2 168 +
Chr1	stalkie_big_nohaplotig	CDS	159770638	159770887	.	-	1	Parent=FBgn0053178.1.mrna1;Target=FBgn0053178.1 252 501 +
Chr1	stalkie_big_nohaplotig	CDS	159772418	159772500	.	-	0	Parent=FBgn0053178.1.mrna1;Target=FBgn0053178.1 169 251 +
Chr1	stalkie_big_nohaplotig	CDS	159773252	159773416	.	-	0	Parent=FBgn0053178.1.mrna1;Target=FBgn0053178.1 4 168 +
Chr1	gffcl	locus	159786953	159798948	.	+	.	ID=RLOC_00013051;geneIDs=FBgn0030608.1.path1,comp162988_c0_seq1.path1;transcripts=FBgn0030608.1.mrna1,comp162988_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159786953	159798948	.	+	.	ID=FBgn0030608.1.mrna1;geneID=FBgn0030608.1.path1;Name=FBgn0030608.1;Dir=sensecoverage=100.0;identity=99.7;matches=1008;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013051
Chr1	stalkie_big_nohaplotig	exon	159786953	159787187	100	+	.	Parent=FBgn0030608.1.mrna1;Target=FBgn0030608.1 1 235 +
Chr1	stalkie_big_nohaplotig	exon	159795975	159796412	99	+	.	Parent=FBgn0030608.1.mrna1;Target=FBgn0030608.1 236 673 +
Chr1	stalkie_big_nohaplotig	exon	159797158	159797205	100	+	.	Parent=FBgn0030608.1.mrna1;Target=FBgn0030608.1 674 721 +
Chr1	stalkie_big_nohaplotig	exon	159798659	159798948	99	+	.	Parent=FBgn0030608.1.mrna1;Target=FBgn0030608.1 722 1011 +
Chr1	stalkie_big_nohaplotig	CDS	159786953	159787187	.	+	0	Parent=FBgn0030608.1.mrna1;Target=FBgn0030608.1 1 235 +
Chr1	stalkie_big_nohaplotig	CDS	159795975	159796412	.	+	2	Parent=FBgn0030608.1.mrna1;Target=FBgn0030608.1 236 673 +
Chr1	stalkie_big_nohaplotig	CDS	159797158	159797205	.	+	2	Parent=FBgn0030608.1.mrna1;Target=FBgn0030608.1 674 721 +
Chr1	stalkie_big_nohaplotig	CDS	159798659	159798948	.	+	2	Parent=FBgn0030608.1.mrna1;Target=FBgn0030608.1 722 1011 +
Chr1	stalkie_big_nohaplotig	mRNA	159797182	159798260	.	+	.	ID=comp162988_c0_seq1.mrna1;geneID=comp162988_c0_seq1.path1;Name=comp162988_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=1063;mismatches=16;indels=4;unknowns=0;Target=comp162988_c0_seq1 1083 1 .;CDS_Target=comp162988_c0_seq1 632 516 .;locus=RLOC_00013051
Chr1	stalkie_big_nohaplotig	exon	159797182	159798260	98	+	.	Parent=comp162988_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159797693	159797809	.	+	0	Parent=comp162988_c0_seq1.mrna1
Chr1	gffcl	locus	159793367	159795284	.	-	.	ID=RLOC_00013052;geneIDs=comp156354_c0_seq1.path1;transcripts=comp156354_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159793367	159795284	.	-	.	ID=comp156354_c0_seq1.mrna1;geneID=comp156354_c0_seq1.path1;Name=comp156354_c0_seq1;Dir=indeterminatecoverage=99.1;identity=95.3;matches=1869;mismatches=40;indels=53;unknowns=0;Target=comp156354_c0_seq1 1969 17 .;CDS_Target=comp156354_c0_seq1 705 640 .;locus=RLOC_00013052
Chr1	stalkie_big_nohaplotig	exon	159793367	159795284	95	-	.	Parent=comp156354_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159794632	159794696	.	-	0	Parent=comp156354_c0_seq1.mrna1
Chr1	gffcl	locus	159798269	159798523	.	+	.	ID=RLOC_00013053;geneIDs=comp134721_c0_seq1.path1;transcripts=comp134721_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159798269	159798523	.	+	.	ID=comp134721_c0_seq1.mrna1;geneID=comp134721_c0_seq1.path1;Name=comp134721_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=254;mismatches=0;indels=1;unknowns=0;Target=comp134721_c0_seq1 254 1 .;CDS_Target=comp134721_c0_seq1 47 3 .;locus=RLOC_00013053
Chr1	stalkie_big_nohaplotig	exon	159798269	159798523	99	+	.	Parent=comp134721_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159798271	159798316	.	+	0	Parent=comp134721_c0_seq1.mrna1
Chr1	gffcl	locus	159799255	159799588	.	-	.	ID=RLOC_00013054;geneIDs=comp131714_c0_seq1.path1;transcripts=comp131714_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159799255	159799588	.	-	.	ID=comp131714_c0_seq1.mrna1;geneID=comp131714_c0_seq1.path1;Name=comp131714_c0_seq1;Dir=indeterminatecoverage=96.3;identity=99.4;matches=332;mismatches=2;indels=0;unknowns=0;Target=comp131714_c0_seq1 346 13 .;CDS_Target=comp131714_c0_seq1 146 15 .;locus=RLOC_00013054
Chr1	stalkie_big_nohaplotig	exon	159799255	159799588	99	-	.	Parent=comp131714_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159799455	159799586	.	-	0	Parent=comp131714_c0_seq1.mrna1
Chr1	gffcl	locus	159820060	159862509	.	-	.	ID=RLOC_00013055;geneIDs=FBgn0027343.1.path1;transcripts=FBgn0027343.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159820060	159862509	.	-	.	ID=FBgn0027343.1.mrna1;geneID=FBgn0027343.1.path1;Name=FBgn0027343.1;Dir=sensecoverage=100.0;identity=99.4;matches=1742;mismatches=10;indels=0;unknowns=0;locus=RLOC_00013055
Chr1	stalkie_big_nohaplotig	exon	159820060	159821589	99	-	.	Parent=FBgn0027343.1.mrna1;Target=FBgn0027343.1 223 1752 +
Chr1	stalkie_big_nohaplotig	exon	159862288	159862509	100	-	.	Parent=FBgn0027343.1.mrna1;Target=FBgn0027343.1 1 222 +
Chr1	stalkie_big_nohaplotig	CDS	159820060	159821589	.	-	0	Parent=FBgn0027343.1.mrna1;Target=FBgn0027343.1 223 1752 +
Chr1	stalkie_big_nohaplotig	CDS	159862288	159862509	.	-	0	Parent=FBgn0027343.1.mrna1;Target=FBgn0027343.1 1 222 +
Chr1	gffcl	locus	159896765	159900486	.	+	.	ID=RLOC_00013056;geneIDs=FBgn0029763.1.path1;transcripts=FBgn0029763.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159896765	159900486	.	+	.	ID=FBgn0029763.1.mrna1;geneID=FBgn0029763.1.path1;Name=FBgn0029763.1;Dir=sensecoverage=100.0;identity=99.7;matches=2587;mismatches=7;indels=1;unknowns=0;locus=RLOC_00013056
Chr1	stalkie_big_nohaplotig	exon	159896765	159897121	99	+	.	Parent=FBgn0029763.1.mrna1;Target=FBgn0029763.1 1 357 +
Chr1	stalkie_big_nohaplotig	exon	159897186	159897694	99	+	.	Parent=FBgn0029763.1.mrna1;Target=FBgn0029763.1 358 866 +
Chr1	stalkie_big_nohaplotig	exon	159897762	159897898	100	+	.	Parent=FBgn0029763.1.mrna1;Target=FBgn0029763.1 867 1003 +
Chr1	stalkie_big_nohaplotig	exon	159897955	159898072	99	+	.	Parent=FBgn0029763.1.mrna1;Target=FBgn0029763.1 1004 1121 +
Chr1	stalkie_big_nohaplotig	exon	159898956	159899620	99	+	.	Parent=FBgn0029763.1.mrna1;Target=FBgn0029763.1 1122 1786 +
Chr1	stalkie_big_nohaplotig	exon	159899679	159900486	99	+	.	Parent=FBgn0029763.1.mrna1;Target=FBgn0029763.1 1787 2595 +
Chr1	stalkie_big_nohaplotig	CDS	159896765	159897121	.	+	0	Parent=FBgn0029763.1.mrna1;Target=FBgn0029763.1 1 357 +
Chr1	stalkie_big_nohaplotig	CDS	159897186	159897694	.	+	0	Parent=FBgn0029763.1.mrna1;Target=FBgn0029763.1 358 866 +
Chr1	stalkie_big_nohaplotig	CDS	159897762	159897898	.	+	1	Parent=FBgn0029763.1.mrna1;Target=FBgn0029763.1 867 1003 +
Chr1	stalkie_big_nohaplotig	CDS	159897955	159898072	.	+	2	Parent=FBgn0029763.1.mrna1;Target=FBgn0029763.1 1004 1121 +
Chr1	stalkie_big_nohaplotig	CDS	159898956	159899620	.	+	1	Parent=FBgn0029763.1.mrna1;Target=FBgn0029763.1 1122 1786 +
Chr1	stalkie_big_nohaplotig	CDS	159899679	159900486	.	+	2	Parent=FBgn0029763.1.mrna1;Target=FBgn0029763.1 1787 2595 +
Chr1	gffcl	locus	159908537	159910410	.	+	.	ID=RLOC_00013058;geneIDs=comp162840_c0_seq1.path1;transcripts=comp162840_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159908537	159910410	.	+	.	ID=comp162840_c0_seq1.mrna1;geneID=comp162840_c0_seq1.path1;Name=comp162840_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=1830;mismatches=41;indels=11;unknowns=0;Target=comp162840_c0_seq1 1879 1 .;CDS_Target=comp162840_c0_seq1 1781 1056 .;locus=RLOC_00013058
Chr1	stalkie_big_nohaplotig	exon	159908537	159910410	97	+	.	Parent=comp162840_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159909591	159910312	.	+	0	Parent=comp162840_c0_seq1.mrna1
Chr1	gffcl	locus	159913636	159916969	.	-	.	ID=RLOC_00013059;geneIDs=comp161674_c0_seq1.path1;transcripts=comp161674_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159913636	159916969	.	-	.	ID=comp161674_c0_seq1.mrna1;geneID=comp161674_c0_seq1.path1;Name=comp161674_c0_seq1;Dir=sensecoverage=96.6;identity=97.9;matches=1227;mismatches=22;indels=4;unknowns=0;Target=comp161674_c0_seq1 397 1101 +;locus=RLOC_00013059
Chr1	stalkie_big_nohaplotig	exon	159913636	159914862	97	-	.	Parent=comp161674_c0_seq1.mrna1;Target=comp161674_c0_seq1 27 1249 +
Chr1	stalkie_big_nohaplotig	exon	159916944	159916969	100	-	.	Parent=comp161674_c0_seq1.mrna1;Target=comp161674_c0_seq1 1 26 +
Chr1	stalkie_big_nohaplotig	CDS	159913787	159914491	.	-	0	Parent=comp161674_c0_seq1.mrna1
Chr1	gffcl	locus	159921461	159922308	.	+	.	ID=RLOC_00013060;geneIDs=comp161948_c0_seq1.path1;transcripts=comp161948_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159921461	159922308	.	+	.	ID=comp161948_c0_seq1.mrna1;geneID=comp161948_c0_seq1.path1;Name=comp161948_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.0;matches=831;mismatches=17;indels=0;unknowns=0;Target=comp161948_c0_seq1 848 1 .;CDS_Target=comp161948_c0_seq1 628 2 .;locus=RLOC_00013060
Chr1	stalkie_big_nohaplotig	exon	159921461	159922308	97	+	.	Parent=comp161948_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159921462	159922088	.	+	0	Parent=comp161948_c0_seq1.mrna1
Chr1	gffcl	locus	159925656	159926042	.	+	.	ID=RLOC_00013061;geneIDs=comp54342_c0_seq1.path1;transcripts=comp54342_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159925656	159926042	.	+	.	ID=comp54342_c0_seq1.mrna1;geneID=comp54342_c0_seq1.path1;Name=comp54342_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.9;matches=369;mismatches=18;indels=2;unknowns=0;Target=comp54342_c0_seq1 389 1 .;CDS_Target=comp54342_c0_seq1 93 1 .;locus=RLOC_00013061
Chr1	stalkie_big_nohaplotig	exon	159925656	159926042	94	+	.	Parent=comp54342_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159925656	159925746	.	+	0	Parent=comp54342_c0_seq1.mrna1
Chr1	gffcl	locus	159926059	159926999	.	-	.	ID=RLOC_00013062;geneIDs=comp155693_c0_seq1.path1;transcripts=comp155693_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159926059	159926999	.	-	.	ID=comp155693_c0_seq1.mrna1;geneID=comp155693_c0_seq1.path1;Name=comp155693_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.8;matches=911;mismatches=16;indels=14;unknowns=0;Target=comp155693_c0_seq1 927 1 .;CDS_Target=comp155693_c0_seq1 829 635 .;locus=RLOC_00013062
Chr1	stalkie_big_nohaplotig	exon	159926059	159926999	96	-	.	Parent=comp155693_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	159926157	159926351	.	-	0	Parent=comp155693_c0_seq1.mrna1
Chr1	gffcl	locus	159937270	159940276	.	+	.	ID=RLOC_00013063;geneIDs=FBgn0045770.2.path1;transcripts=FBgn0045770.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	159937270	159940276	.	+	.	ID=FBgn0045770.2.mrna1;geneID=FBgn0045770.2.path1;Name=FBgn0045770.2;Dir=sensecoverage=100.0;identity=99.2;matches=1604;mismatches=13;indels=0;unknowns=0;locus=RLOC_00013063
Chr1	stalkie_big_nohaplotig	exon	159937270	159937407	100	+	.	Parent=FBgn0045770.2.mrna1;Target=FBgn0045770.2 1 138 +
Chr1	stalkie_big_nohaplotig	exon	159937478	159937599	99	+	.	Parent=FBgn0045770.2.mrna1;Target=FBgn0045770.2 139 260 +
Chr1	stalkie_big_nohaplotig	exon	159937693	159937828	100	+	.	Parent=FBgn0045770.2.mrna1;Target=FBgn0045770.2 261 396 +
Chr1	stalkie_big_nohaplotig	exon	159938638	159939143	98	+	.	Parent=FBgn0045770.2.mrna1;Target=FBgn0045770.2 397 902 +
Chr1	stalkie_big_nohaplotig	exon	159939212	159939431	99	+	.	Parent=FBgn0045770.2.mrna1;Target=FBgn0045770.2 903 1122 +
Chr1	stalkie_big_nohaplotig	exon	159939487	159939736	99	+	.	Parent=FBgn0045770.2.mrna1;Target=FBgn0045770.2 1123 1372 +
Chr1	stalkie_big_nohaplotig	exon	159939960	159940033	100	+	.	Parent=FBgn0045770.2.mrna1;Target=FBgn0045770.2 1373 1446 +
Chr1	stalkie_big_nohaplotig	exon	159940106	159940276	99	+	.	Parent=FBgn0045770.2.mrna1;Target=FBgn0045770.2 1447 1617 +
Chr1	stalkie_big_nohaplotig	CDS	159937270	159937407	.	+	0	Parent=FBgn0045770.2.mrna1;Target=FBgn0045770.2 1 138 +
Chr1	stalkie_big_nohaplotig	CDS	159937478	159937599	.	+	0	Parent=FBgn0045770.2.mrna1;Target=FBgn0045770.2 139 260 +
Chr1	stalkie_big_nohaplotig	CDS	159937693	159937828	.	+	1	Parent=FBgn0045770.2.mrna1;Target=FBgn0045770.2 261 396 +
Chr1	stalkie_big_nohaplotig	CDS	159938638	159939143	.	+	0	Parent=FBgn0045770.2.mrna1;Target=FBgn0045770.2 397 902 +
Chr1	stalkie_big_nohaplotig	CDS	159939212	159939431	.	+	1	Parent=FBgn0045770.2.mrna1;Target=FBgn0045770.2 903 1122 +
Chr1	stalkie_big_nohaplotig	CDS	159939487	159939736	.	+	0	Parent=FBgn0045770.2.mrna1;Target=FBgn0045770.2 1123 1372 +
Chr1	stalkie_big_nohaplotig	CDS	159939960	159940033	.	+	2	Parent=FBgn0045770.2.mrna1;Target=FBgn0045770.2 1373 1446 +
Chr1	stalkie_big_nohaplotig	CDS	159940106	159940276	.	+	0	Parent=FBgn0045770.2.mrna1;Target=FBgn0045770.2 1447 1617 +
Chr1	gffcl	locus	160030328	160051649	.	+	.	ID=RLOC_00013064;geneIDs=FBgn0029768.1.path1;transcripts=FBgn0029768.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160030328	160051649	.	+	.	ID=FBgn0029768.1.mrna1;geneID=FBgn0029768.1.path1;Name=FBgn0029768.1;Dir=sensecoverage=100.0;identity=99.8;matches=1240;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013064
Chr1	stalkie_big_nohaplotig	exon	160030328	160030649	99	+	.	Parent=FBgn0029768.1.mrna1;Target=FBgn0029768.1 1 322 +
Chr1	stalkie_big_nohaplotig	exon	160032299	160032429	100	+	.	Parent=FBgn0029768.1.mrna1;Target=FBgn0029768.1 323 453 +
Chr1	stalkie_big_nohaplotig	exon	160039514	160039575	98	+	.	Parent=FBgn0029768.1.mrna1;Target=FBgn0029768.1 454 515 +
Chr1	stalkie_big_nohaplotig	exon	160050923	160051649	100	+	.	Parent=FBgn0029768.1.mrna1;Target=FBgn0029768.1 516 1242 +
Chr1	stalkie_big_nohaplotig	CDS	160030328	160030649	.	+	0	Parent=FBgn0029768.1.mrna1;Target=FBgn0029768.1 1 322 +
Chr1	stalkie_big_nohaplotig	CDS	160032299	160032429	.	+	2	Parent=FBgn0029768.1.mrna1;Target=FBgn0029768.1 323 453 +
Chr1	stalkie_big_nohaplotig	CDS	160039514	160039575	.	+	0	Parent=FBgn0029768.1.mrna1;Target=FBgn0029768.1 454 515 +
Chr1	stalkie_big_nohaplotig	CDS	160050923	160051649	.	+	1	Parent=FBgn0029768.1.mrna1;Target=FBgn0029768.1 516 1242 +
Chr1	gffcl	locus	160036016	160185956	.	-	.	ID=RLOC_00013065;geneIDs=comp163061_c0_seq1.path1;transcripts=comp163061_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160036016	160185956	.	-	.	ID=comp163061_c0_seq1.mrna1;geneID=comp163061_c0_seq1.path1;Name=comp163061_c0_seq1;Dir=indeterminatecoverage=84.1;identity=98.8;matches=1607;mismatches=9;indels=10;unknowns=0;Target=comp163061_c0_seq1 1140 1048 .;locus=RLOC_00013065
Chr1	stalkie_big_nohaplotig	exon	160036016	160036026	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1728 1718 .
Chr1	stalkie_big_nohaplotig	exon	160042769	160042772	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1717 1714 .
Chr1	stalkie_big_nohaplotig	exon	160050265	160050271	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1713 1707 .
Chr1	stalkie_big_nohaplotig	exon	160052660	160052669	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1694 1685 .
Chr1	stalkie_big_nohaplotig	exon	160059123	160059131	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1684 1676 .
Chr1	stalkie_big_nohaplotig	exon	160071676	160071677	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1675 1674 .
Chr1	stalkie_big_nohaplotig	exon	160087405	160087411	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1673 1667 .
Chr1	stalkie_big_nohaplotig	exon	160088604	160088607	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1666 1663 .
Chr1	stalkie_big_nohaplotig	exon	160089291	160089292	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1662 1661 .
Chr1	stalkie_big_nohaplotig	exon	160090366	160090370	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1660 1656 .
Chr1	stalkie_big_nohaplotig	exon	160092225	160092226	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1655 1654 .
Chr1	stalkie_big_nohaplotig	exon	160093307	160093311	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1653 1649 .
Chr1	stalkie_big_nohaplotig	exon	160094027	160094029	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1648 1646 .
Chr1	stalkie_big_nohaplotig	exon	160096255	160096260	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1645 1640 .
Chr1	stalkie_big_nohaplotig	exon	160098520	160098524	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1639 1635 .
Chr1	stalkie_big_nohaplotig	exon	160098945	160098951	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1634 1628 .
Chr1	stalkie_big_nohaplotig	exon	160101404	160101406	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1627 1625 .
Chr1	stalkie_big_nohaplotig	exon	160109495	160109497	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1624 1622 .
Chr1	stalkie_big_nohaplotig	exon	160118895	160118897	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1621 1619 .
Chr1	stalkie_big_nohaplotig	exon	160123145	160123152	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1618 1611 .
Chr1	stalkie_big_nohaplotig	exon	160129266	160129271	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1610 1605 .
Chr1	stalkie_big_nohaplotig	exon	160134079	160134083	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1604 1600 .
Chr1	stalkie_big_nohaplotig	exon	160137479	160137483	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1599 1595 .
Chr1	stalkie_big_nohaplotig	exon	160137516	160137523	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1544 1537 .
Chr1	stalkie_big_nohaplotig	exon	160153482	160153483	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1536 1535 .
Chr1	stalkie_big_nohaplotig	exon	160161691	160161697	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1533 1527 .
Chr1	stalkie_big_nohaplotig	exon	160167798	160167801	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1526 1523 .
Chr1	stalkie_big_nohaplotig	exon	160167865	160167867	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1522 1520 .
Chr1	stalkie_big_nohaplotig	exon	160170850	160170853	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1519 1516 .
Chr1	stalkie_big_nohaplotig	exon	160172743	160172744	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1515 1514 .
Chr1	stalkie_big_nohaplotig	exon	160175066	160175067	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1513 1512 .
Chr1	stalkie_big_nohaplotig	exon	160175095	160175102	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1488 1481 .
Chr1	stalkie_big_nohaplotig	exon	160176764	160176769	100	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1480 1475 .
Chr1	stalkie_big_nohaplotig	exon	160184510	160185956	98	-	.	Parent=comp163061_c0_seq1.mrna1;Target=comp163061_c0_seq1 1474 18 .
Chr1	stalkie_big_nohaplotig	CDS	160184844	160184936	.	-	0	Parent=comp163061_c0_seq1.mrna1
Chr1	gffcl	locus	160104267	160104931	.	-	.	ID=RLOC_00013066;geneIDs=FBgn0029771.1.path1;transcripts=FBgn0029771.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160104267	160104931	.	-	.	ID=FBgn0029771.1.mrna1;geneID=FBgn0029771.1.path1;Name=FBgn0029771.1;Dir=sensecoverage=100.0;identity=98.7;matches=453;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013066
Chr1	stalkie_big_nohaplotig	exon	160104267	160104377	98	-	.	Parent=FBgn0029771.1.mrna1;Target=FBgn0029771.1 349 459 +
Chr1	stalkie_big_nohaplotig	exon	160104475	160104747	98	-	.	Parent=FBgn0029771.1.mrna1;Target=FBgn0029771.1 76 348 +
Chr1	stalkie_big_nohaplotig	exon	160104857	160104931	100	-	.	Parent=FBgn0029771.1.mrna1;Target=FBgn0029771.1 1 75 +
Chr1	stalkie_big_nohaplotig	CDS	160104267	160104377	.	-	0	Parent=FBgn0029771.1.mrna1;Target=FBgn0029771.1 349 459 +
Chr1	stalkie_big_nohaplotig	CDS	160104475	160104747	.	-	0	Parent=FBgn0029771.1.mrna1;Target=FBgn0029771.1 76 348 +
Chr1	stalkie_big_nohaplotig	CDS	160104857	160104931	.	-	0	Parent=FBgn0029771.1.mrna1;Target=FBgn0029771.1 1 75 +
Chr1	gffcl	locus	160127166	160131077	.	-	.	ID=RLOC_00013067;geneIDs=comp151577_c1_seq1.path1;transcripts=comp151577_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160127166	160131077	.	-	.	ID=comp151577_c1_seq1.mrna1;geneID=comp151577_c1_seq1.path1;Name=comp151577_c1_seq1;Dir=sensecoverage=98.0;identity=92.1;matches=1698;mismatches=66;indels=79;unknowns=0;Target=comp151577_c1_seq1 23 193 +;locus=RLOC_00013067
Chr1	stalkie_big_nohaplotig	exon	160127166	160127969	97	-	.	Parent=comp151577_c1_seq1.mrna1;Target=comp151577_c1_seq1 1011 1804 +
Chr1	stalkie_big_nohaplotig	exon	160130057	160131077	88	-	.	Parent=comp151577_c1_seq1.mrna1;Target=comp151577_c1_seq1 23 1010 +
Chr1	stalkie_big_nohaplotig	CDS	160130896	160131077	.	-	0	Parent=comp151577_c1_seq1.mrna1
Chr1	gffcl	locus	160128929	160182958	.	+	.	ID=RLOC_00013068;geneIDs=FBgn0052816.1.path1;transcripts=FBgn0052816.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160128929	160182958	.	+	.	ID=FBgn0052816.1.mrna1;geneID=FBgn0052816.1.path1;Name=FBgn0052816.1;Dir=sensecoverage=100.0;identity=99.4;matches=999;mismatches=0;indels=6;unknowns=0;locus=RLOC_00013068
Chr1	stalkie_big_nohaplotig	exon	160128929	160129121	96	+	.	Parent=FBgn0052816.1.mrna1;Target=FBgn0052816.1 1 199 +
Chr1	stalkie_big_nohaplotig	exon	160182153	160182958	100	+	.	Parent=FBgn0052816.1.mrna1;Target=FBgn0052816.1 200 1005 +
Chr1	stalkie_big_nohaplotig	CDS	160128929	160129121	.	+	0	Parent=FBgn0052816.1.mrna1;Target=FBgn0052816.1 1 199 +
Chr1	stalkie_big_nohaplotig	CDS	160182153	160182958	.	+	2	Parent=FBgn0052816.1.mrna1;Target=FBgn0052816.1 200 1005 +
Chr1	gffcl	locus	160170203	160175808	.	-	.	ID=RLOC_00013069;geneIDs=comp151263_c0_seq1.path1;transcripts=comp151263_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160170203	160175808	.	-	.	ID=comp151263_c0_seq1.mrna1;geneID=comp151263_c0_seq1.path1;Name=comp151263_c0_seq1;Dir=sensecoverage=99.6;identity=99.4;matches=687;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013069
Chr1	stalkie_big_nohaplotig	exon	160170203	160170756	99	-	.	Parent=comp151263_c0_seq1.mrna1;Target=comp151263_c0_seq1 139 692 +
Chr1	stalkie_big_nohaplotig	exon	160175672	160175808	99	-	.	Parent=comp151263_c0_seq1.mrna1;Target=comp151263_c0_seq1 2 138 +
Chr1	stalkie_big_nohaplotig	CDS	160170426	160170756	.	-	1	Parent=comp151263_c0_seq1.mrna1;Target=comp151263_c0_seq1 139 469 +
Chr1	stalkie_big_nohaplotig	CDS	160175672	160175691	.	-	0	Parent=comp151263_c0_seq1.mrna1;Target=comp151263_c0_seq1 119 138 +
Chr1	gffcl	locus	160183832	160184097	.	+	.	ID=RLOC_00013070;geneIDs=comp159850_c0_seq1.path1;transcripts=comp159850_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160183832	160184097	.	+	.	ID=comp159850_c0_seq1.mrna1;geneID=comp159850_c0_seq1.path1;Name=comp159850_c0_seq1;Dir=indeterminatecoverage=89.8;identity=91.0;matches=242;mismatches=21;indels=3;unknowns=0;Target=comp159850_c0_seq1 291 29 .;CDS_Target=comp159850_c0_seq1 102 31 .;locus=RLOC_00013070
Chr1	stalkie_big_nohaplotig	exon	160183832	160184097	90	+	.	Parent=comp159850_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160183834	160183907	.	+	0	Parent=comp159850_c0_seq1.mrna1
Chr1	gffcl	locus	160225854	160226253	.	+	.	ID=RLOC_00013071;geneIDs=comp155419_c0_seq1.path1;transcripts=comp155419_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160225854	160226253	.	+	.	ID=comp155419_c0_seq1.mrna1;geneID=comp155419_c0_seq1.path1;Name=comp155419_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=398;mismatches=2;indels=0;unknowns=0;Target=comp155419_c0_seq1 400 1 .;CDS_Target=comp155419_c0_seq1 161 3 .;locus=RLOC_00013071
Chr1	stalkie_big_nohaplotig	exon	160225854	160226253	99	+	.	Parent=comp155419_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160225856	160226014	.	+	0	Parent=comp155419_c0_seq1.mrna1
Chr1	gffcl	locus	160233750	160234445	.	-	.	ID=RLOC_00013072;geneIDs=FBgn0040371.2.path1;transcripts=FBgn0040371.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160233750	160234445	.	-	.	ID=FBgn0040371.2.mrna1;geneID=FBgn0040371.2.path1;Name=FBgn0040371.2;Dir=indeterminatecoverage=100.0;identity=99.7;matches=694;mismatches=2;indels=0;unknowns=0;Target=FBgn0040371.2 696 1 .;locus=RLOC_00013072
Chr1	stalkie_big_nohaplotig	exon	160233750	160234445	99	-	.	Parent=FBgn0040371.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160233750	160234445	.	-	0	Parent=FBgn0040371.2.mrna1
Chr1	gffcl	locus	160257392	160259910	.	-	.	ID=RLOC_00013073;geneIDs=Dv_FBgn0206456.1.path1;transcripts=Dv_FBgn0206456.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160257392	160259910	.	-	.	ID=Dv_FBgn0206456.1.mrna1;geneID=Dv_FBgn0206456.1.path1;Name=Dv_FBgn0206456.1;Dir=sensecoverage=100.0;identity=98.2;matches=698;mismatches=12;indels=1;unknowns=0;locus=RLOC_00013073
Chr1	stalkie_big_nohaplotig	exon	160257392	160257670	99	-	.	Parent=Dv_FBgn0206456.1.mrna1;Target=Dv_FBgn0206456.1 433 711 +
Chr1	stalkie_big_nohaplotig	exon	160257725	160257910	97	-	.	Parent=Dv_FBgn0206456.1.mrna1;Target=Dv_FBgn0206456.1 247 432 +
Chr1	stalkie_big_nohaplotig	exon	160258086	160258128	95	-	.	Parent=Dv_FBgn0206456.1.mrna1;Target=Dv_FBgn0206456.1 204 246 +
Chr1	stalkie_big_nohaplotig	exon	160258252	160258280	96	-	.	Parent=Dv_FBgn0206456.1.mrna1;Target=Dv_FBgn0206456.1 175 203 +
Chr1	stalkie_big_nohaplotig	exon	160258899	160259005	97	-	.	Parent=Dv_FBgn0206456.1.mrna1;Target=Dv_FBgn0206456.1 67 174 +
Chr1	stalkie_big_nohaplotig	exon	160259845	160259910	98	-	.	Parent=Dv_FBgn0206456.1.mrna1;Target=Dv_FBgn0206456.1 1 66 +
Chr1	stalkie_big_nohaplotig	CDS	160257392	160257670	.	-	0	Parent=Dv_FBgn0206456.1.mrna1;Target=Dv_FBgn0206456.1 433 711 +
Chr1	stalkie_big_nohaplotig	CDS	160257725	160257910	.	-	0	Parent=Dv_FBgn0206456.1.mrna1;Target=Dv_FBgn0206456.1 247 432 +
Chr1	stalkie_big_nohaplotig	CDS	160258086	160258128	.	-	1	Parent=Dv_FBgn0206456.1.mrna1;Target=Dv_FBgn0206456.1 204 246 +
Chr1	stalkie_big_nohaplotig	CDS	160258252	160258268	.	-	0	Parent=Dv_FBgn0206456.1.mrna1;Target=Dv_FBgn0206456.1 187 203 +
Chr1	gffcl	locus	160303611	160404500	.	+	.	ID=RLOC_00013074;geneIDs=FBgn0040370.2.path1;transcripts=FBgn0040370.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160303611	160404500	.	+	.	ID=FBgn0040370.2.mrna1;geneID=FBgn0040370.2.path1;Name=FBgn0040370.2;Dir=sensecoverage=100.0;identity=99.9;matches=866;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013074
Chr1	stalkie_big_nohaplotig	exon	160303611	160303717	100	+	.	Parent=FBgn0040370.2.mrna1;Target=FBgn0040370.2 1 107 +
Chr1	stalkie_big_nohaplotig	exon	160307600	160307831	100	+	.	Parent=FBgn0040370.2.mrna1;Target=FBgn0040370.2 108 339 +
Chr1	stalkie_big_nohaplotig	exon	160400681	160400878	100	+	.	Parent=FBgn0040370.2.mrna1;Target=FBgn0040370.2 340 537 +
Chr1	stalkie_big_nohaplotig	exon	160404110	160404202	98	+	.	Parent=FBgn0040370.2.mrna1;Target=FBgn0040370.2 538 630 +
Chr1	stalkie_big_nohaplotig	exon	160404264	160404500	100	+	.	Parent=FBgn0040370.2.mrna1;Target=FBgn0040370.2 631 867 +
Chr1	stalkie_big_nohaplotig	CDS	160303611	160303717	.	+	0	Parent=FBgn0040370.2.mrna1;Target=FBgn0040370.2 1 107 +
Chr1	stalkie_big_nohaplotig	CDS	160307600	160307831	.	+	1	Parent=FBgn0040370.2.mrna1;Target=FBgn0040370.2 108 339 +
Chr1	stalkie_big_nohaplotig	CDS	160400681	160400878	.	+	0	Parent=FBgn0040370.2.mrna1;Target=FBgn0040370.2 340 537 +
Chr1	stalkie_big_nohaplotig	CDS	160404110	160404202	.	+	0	Parent=FBgn0040370.2.mrna1;Target=FBgn0040370.2 538 630 +
Chr1	stalkie_big_nohaplotig	CDS	160404264	160404500	.	+	0	Parent=FBgn0040370.2.mrna1;Target=FBgn0040370.2 631 867 +
Chr1	gffcl	locus	160356980	160357571	.	+	.	ID=RLOC_00013075;geneIDs=comp149402_c0_seq1.path1;transcripts=comp149402_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160356980	160357571	.	+	.	ID=comp149402_c0_seq1.mrna1;geneID=comp149402_c0_seq1.path1;Name=comp149402_c0_seq1;Dir=indeterminatecoverage=76.7;identity=99.0;matches=587;mismatches=5;indels=1;unknowns=0;Target=comp149402_c0_seq1 773 181 .;CDS_Target=comp149402_c0_seq1 520 272 .;locus=RLOC_00013075
Chr1	stalkie_big_nohaplotig	exon	160356980	160357571	98	+	.	Parent=comp149402_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160357070	160357318	.	+	0	Parent=comp149402_c0_seq1.mrna1
Chr1	gffcl	locus	160408776	160425557	.	-	.	ID=RLOC_00013076;geneIDs=FBgn0026575.1.path1;transcripts=FBgn0026575.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160408776	160425557	.	-	.	ID=FBgn0026575.1.mrna1;geneID=FBgn0026575.1.path1;Name=FBgn0026575.1;Dir=sensecoverage=100.0;identity=99.5;matches=4728;mismatches=18;indels=6;unknowns=0;locus=RLOC_00013076
Chr1	stalkie_big_nohaplotig	exon	160408776	160410044	99	-	.	Parent=FBgn0026575.1.mrna1;Target=FBgn0026575.1 3478 4752 +
Chr1	stalkie_big_nohaplotig	exon	160410333	160410872	99	-	.	Parent=FBgn0026575.1.mrna1;Target=FBgn0026575.1 2938 3477 +
Chr1	stalkie_big_nohaplotig	exon	160410941	160411878	99	-	.	Parent=FBgn0026575.1.mrna1;Target=FBgn0026575.1 2000 2937 +
Chr1	stalkie_big_nohaplotig	exon	160412388	160412771	100	-	.	Parent=FBgn0026575.1.mrna1;Target=FBgn0026575.1 1616 1999 +
Chr1	stalkie_big_nohaplotig	exon	160412828	160413884	99	-	.	Parent=FBgn0026575.1.mrna1;Target=FBgn0026575.1 559 1615 +
Chr1	stalkie_big_nohaplotig	exon	160413943	160414086	99	-	.	Parent=FBgn0026575.1.mrna1;Target=FBgn0026575.1 415 558 +
Chr1	stalkie_big_nohaplotig	exon	160414959	160415210	100	-	.	Parent=FBgn0026575.1.mrna1;Target=FBgn0026575.1 163 414 +
Chr1	stalkie_big_nohaplotig	exon	160425396	160425557	100	-	.	Parent=FBgn0026575.1.mrna1;Target=FBgn0026575.1 1 162 +
Chr1	stalkie_big_nohaplotig	CDS	160408776	160410044	.	-	0	Parent=FBgn0026575.1.mrna1;Target=FBgn0026575.1 3478 4752 +
Chr1	stalkie_big_nohaplotig	CDS	160410333	160410872	.	-	0	Parent=FBgn0026575.1.mrna1;Target=FBgn0026575.1 2938 3477 +
Chr1	stalkie_big_nohaplotig	CDS	160410941	160411878	.	-	2	Parent=FBgn0026575.1.mrna1;Target=FBgn0026575.1 2000 2937 +
Chr1	stalkie_big_nohaplotig	CDS	160412388	160412771	.	-	2	Parent=FBgn0026575.1.mrna1;Target=FBgn0026575.1 1616 1999 +
Chr1	stalkie_big_nohaplotig	CDS	160412828	160413884	.	-	0	Parent=FBgn0026575.1.mrna1;Target=FBgn0026575.1 559 1615 +
Chr1	stalkie_big_nohaplotig	CDS	160413943	160414086	.	-	0	Parent=FBgn0026575.1.mrna1;Target=FBgn0026575.1 415 558 +
Chr1	stalkie_big_nohaplotig	CDS	160414959	160415210	.	-	0	Parent=FBgn0026575.1.mrna1;Target=FBgn0026575.1 163 414 +
Chr1	stalkie_big_nohaplotig	CDS	160425396	160425557	.	-	0	Parent=FBgn0026575.1.mrna1;Target=FBgn0026575.1 1 162 +
Chr1	gffcl	locus	160421781	160422414	.	+	.	ID=RLOC_00013077;geneIDs=comp152066_c1_seq1.path1;transcripts=comp152066_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160421781	160422414	.	+	.	ID=comp152066_c1_seq1.mrna1;geneID=comp152066_c1_seq1.path1;Name=comp152066_c1_seq1;Dir=indeterminatecoverage=99.5;identity=98.7;matches=630;mismatches=4;indels=4;unknowns=0;Target=comp152066_c1_seq1 641 4 .;CDS_Target=comp152066_c1_seq1 424 296 .;locus=RLOC_00013077
Chr1	stalkie_big_nohaplotig	exon	160421781	160422414	98	+	.	Parent=comp152066_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160422071	160422199	.	+	0	Parent=comp152066_c1_seq1.mrna1
Chr1	gffcl	locus	160423177	160424092	.	-	.	ID=RLOC_00013078;geneIDs=comp113624_c1_seq1.path1;transcripts=comp113624_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160423177	160424092	.	-	.	ID=comp113624_c1_seq1.mrna1;geneID=comp113624_c1_seq1.path1;Name=comp113624_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=910;mismatches=3;indels=3;unknowns=0;Target=comp113624_c1_seq1 913 1 .;CDS_Target=comp113624_c1_seq1 426 145 .;locus=RLOC_00013078
Chr1	stalkie_big_nohaplotig	exon	160423177	160424092	99	-	.	Parent=comp113624_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160423664	160423948	.	-	0	Parent=comp113624_c1_seq1.mrna1
Chr1	gffcl	locus	160431439	160432291	.	+	.	ID=RLOC_00013079;geneIDs=FBgn0052704.path1,comp163659_c0_seq1.path1;transcripts=FBgn0052704.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160431439	160432291	.	+	.	ID=FBgn0052704.mrna1;geneID=FBgn0052704.path1;Name=FBgn0052704;Dir=sensecoverage=100.0;identity=99.0;matches=726;mismatches=7;indels=0;unknowns=2;locus=RLOC_00013079
Chr1	stalkie_big_nohaplotig	exon	160431439	160431710	98	+	.	Parent=FBgn0052704.mrna1;Target=FBgn0052704 1 272 +
Chr1	stalkie_big_nohaplotig	exon	160431769	160432018	100	+	.	Parent=FBgn0052704.mrna1;Target=FBgn0052704 273 522 +
Chr1	stalkie_big_nohaplotig	exon	160432079	160432291	99	+	.	Parent=FBgn0052704.mrna1;Target=FBgn0052704 523 735 +
Chr1	stalkie_big_nohaplotig	CDS	160431439	160431710	.	+	0	Parent=FBgn0052704.mrna1;Target=FBgn0052704 1 272 +
Chr1	stalkie_big_nohaplotig	CDS	160431769	160432018	.	+	1	Parent=FBgn0052704.mrna1;Target=FBgn0052704 273 522 +
Chr1	stalkie_big_nohaplotig	CDS	160432079	160432291	.	+	0	Parent=FBgn0052704.mrna1;Target=FBgn0052704 523 735 +
Chr1	gffcl	locus	160432889	160433795	.	-	.	ID=RLOC_00013080;geneIDs=comp160301_c0_seq1.path1;transcripts=comp160301_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160432889	160433795	.	-	.	ID=comp160301_c0_seq1.mrna1;geneID=comp160301_c0_seq1.path1;Name=comp160301_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.4;matches=868;mismatches=30;indels=12;unknowns=0;Target=comp160301_c0_seq1 901 1 .;CDS_Target=comp160301_c0_seq1 774 595 .;locus=RLOC_00013080
Chr1	stalkie_big_nohaplotig	exon	160432889	160433795	95	-	.	Parent=comp160301_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160433016	160433202	.	-	0	Parent=comp160301_c0_seq1.mrna1
Chr1	gffcl	locus	160465277	160467061	.	-	.	ID=RLOC_00013082;geneIDs=comp154166_c0_seq1.path1;transcripts=comp154166_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160465277	160467061	.	-	.	ID=comp154166_c0_seq1.mrna1;geneID=comp154166_c0_seq1.path1;Name=comp154166_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=1567;mismatches=6;indels=4;unknowns=0;locus=RLOC_00013082
Chr1	stalkie_big_nohaplotig	exon	160465277	160466339	99	-	.	Parent=comp154166_c0_seq1.mrna1;Target=comp154166_c0_seq1 1 1067 -
Chr1	stalkie_big_nohaplotig	exon	160466390	160466483	100	-	.	Parent=comp154166_c0_seq1.mrna1;Target=comp154166_c0_seq1 1068 1161 -
Chr1	stalkie_big_nohaplotig	exon	160466580	160466673	100	-	.	Parent=comp154166_c0_seq1.mrna1;Target=comp154166_c0_seq1 1162 1255 -
Chr1	stalkie_big_nohaplotig	exon	160466740	160467061	99	-	.	Parent=comp154166_c0_seq1.mrna1;Target=comp154166_c0_seq1 1256 1577 -
Chr1	stalkie_big_nohaplotig	CDS	160466221	160466339	.	-	0	Parent=comp154166_c0_seq1.mrna1;Target=comp154166_c0_seq1 948 1067 .
Chr1	stalkie_big_nohaplotig	CDS	160466390	160466483	.	-	1	Parent=comp154166_c0_seq1.mrna1;Target=comp154166_c0_seq1 1068 1161 .
Chr1	stalkie_big_nohaplotig	CDS	160466580	160466673	.	-	2	Parent=comp154166_c0_seq1.mrna1;Target=comp154166_c0_seq1 1162 1255 .
Chr1	stalkie_big_nohaplotig	CDS	160466740	160466785	.	-	0	Parent=comp154166_c0_seq1.mrna1;Target=comp154166_c0_seq1 1256 1301 .
Chr1	gffcl	locus	160472599	160473146	.	+	.	ID=RLOC_00013083;geneIDs=comp162772_c0_seq1.path1;transcripts=comp162772_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160472599	160473146	.	+	.	ID=comp162772_c0_seq1.mrna1;geneID=comp162772_c0_seq1.path1;Name=comp162772_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.3;matches=515;mismatches=30;indels=7;unknowns=0;Target=comp162772_c0_seq1 549 1 .;CDS_Target=comp162772_c0_seq1 519 454 .;locus=RLOC_00013083
Chr1	stalkie_big_nohaplotig	exon	160472599	160473146	93	+	.	Parent=comp162772_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160473050	160473116	.	+	0	Parent=comp162772_c0_seq1.mrna1
Chr1	gffcl	locus	160476262	160534663	.	+	.	ID=RLOC_00013084;geneIDs=comp157089_c0_seq1.path1;transcripts=comp157089_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160476262	160534663	.	+	.	ID=comp157089_c0_seq1.mrna1;geneID=comp157089_c0_seq1.path1;Name=comp157089_c0_seq1;Dir=antisensecoverage=97.4;identity=97.7;matches=765;mismatches=6;indels=12;unknowns=0;locus=RLOC_00013084
Chr1	stalkie_big_nohaplotig	exon	160476262	160476590	98	+	.	Parent=comp157089_c0_seq1.mrna1;Target=comp157089_c0_seq1 476 799 -
Chr1	stalkie_big_nohaplotig	exon	160477971	160478204	95	+	.	Parent=comp157089_c0_seq1.mrna1;Target=comp157089_c0_seq1 235 475 -
Chr1	stalkie_big_nohaplotig	exon	160513454	160513522	100	+	.	Parent=comp157089_c0_seq1.mrna1;Target=comp157089_c0_seq1 166 234 -
Chr1	stalkie_big_nohaplotig	exon	160534520	160534663	100	+	.	Parent=comp157089_c0_seq1.mrna1;Target=comp157089_c0_seq1 22 165 -
Chr1	stalkie_big_nohaplotig	CDS	160478178	160478204	.	+	0	Parent=comp157089_c0_seq1.mrna1;Target=comp157089_c0_seq1 235 261 .
Chr1	stalkie_big_nohaplotig	CDS	160513454	160513522	.	+	0	Parent=comp157089_c0_seq1.mrna1;Target=comp157089_c0_seq1 166 234 .
Chr1	stalkie_big_nohaplotig	CDS	160534520	160534663	.	+	0	Parent=comp157089_c0_seq1.mrna1;Target=comp157089_c0_seq1 22 165 .
Chr1	gffcl	locus	160498262	160499707	.	-	.	ID=RLOC_00013085;geneIDs=FBgn0039711.3.path3;transcripts=FBgn0039711.3.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	160498262	160499707	.	-	.	ID=FBgn0039711.3.mrna3;geneID=FBgn0039711.3.path3;Name=FBgn0039711.3;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1445;mismatches=1;indels=0;unknowns=0;Target=FBgn0039711.3 1446 1 .;locus=RLOC_00013085
Chr1	stalkie_big_nohaplotig	exon	160498262	160499707	99	-	.	Parent=FBgn0039711.3.mrna3
Chr1	stalkie_big_nohaplotig	CDS	160498262	160499707	.	-	0	Parent=FBgn0039711.3.mrna3
Chr1	gffcl	locus	160499850	160500253	.	+	.	ID=RLOC_00013086;geneIDs=comp149553_c0_seq1.path4;transcripts=comp149553_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	160499850	160500253	.	+	.	ID=comp149553_c0_seq1.mrna4;geneID=comp149553_c0_seq1.path4;Name=comp149553_c0_seq1;Dir=indeterminatecoverage=89.8;identity=100.0;matches=404;mismatches=0;indels=0;unknowns=0;Target=comp149553_c0_seq1 404 1 .;CDS_Target=comp149553_c0_seq1 384 298 .;locus=RLOC_00013086
Chr1	stalkie_big_nohaplotig	exon	160499850	160500253	100	+	.	Parent=comp149553_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	160500147	160500233	.	+	0	Parent=comp149553_c0_seq1.mrna4
Chr1	gffcl	locus	160525239	160525978	.	+	.	ID=RLOC_00013087;geneIDs=comp148913_c0_seq1.path1;transcripts=comp148913_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160525239	160525978	.	+	.	ID=comp148913_c0_seq1.mrna1;geneID=comp148913_c0_seq1.path1;Name=comp148913_c0_seq1;Dir=indeterminatecoverage=99.2;identity=98.7;matches=732;mismatches=8;indels=2;unknowns=0;Target=comp148913_c0_seq1 748 7 .;CDS_Target=comp148913_c0_seq1 632 564 .;locus=RLOC_00013087
Chr1	stalkie_big_nohaplotig	exon	160525239	160525978	98	+	.	Parent=comp148913_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160525795	160525862	.	+	0	Parent=comp148913_c0_seq1.mrna1
Chr1	gffcl	locus	160530134	160530815	.	-	.	ID=RLOC_00013088;geneIDs=comp155021_c0_seq1.path1;transcripts=comp155021_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160530134	160530815	.	-	.	ID=comp155021_c0_seq1.mrna1;geneID=comp155021_c0_seq1.path1;Name=comp155021_c0_seq1;Dir=indeterminatecoverage=99.6;identity=97.8;matches=667;mismatches=14;indels=1;unknowns=0;Target=comp155021_c0_seq1 681 1 .;CDS_Target=comp155021_c0_seq1 466 182 .;locus=RLOC_00013088
Chr1	stalkie_big_nohaplotig	exon	160530134	160530815	97	-	.	Parent=comp155021_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160530349	160530633	.	-	0	Parent=comp155021_c0_seq1.mrna1
Chr1	gffcl	locus	160531009	160531830	.	-	.	ID=RLOC_00013089;geneIDs=comp146815_c0_seq1.path1;transcripts=comp146815_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160531009	160531830	.	-	.	ID=comp146815_c0_seq1.mrna1;geneID=comp146815_c0_seq1.path1;Name=comp146815_c0_seq1;Dir=sensecoverage=77.3;identity=88.8;matches=651;mismatches=13;indels=69;unknowns=0;Target=comp146815_c0_seq1 447 560 +;locus=RLOC_00013089
Chr1	stalkie_big_nohaplotig	exon	160531009	160531531	86	-	.	Parent=comp146815_c0_seq1.mrna1;Target=comp146815_c0_seq1 357 948 +
Chr1	stalkie_big_nohaplotig	exon	160531690	160531830	98	-	.	Parent=comp146815_c0_seq1.mrna1;Target=comp146815_c0_seq1 216 356 +
Chr1	stalkie_big_nohaplotig	CDS	160531330	160531443	.	-	0	Parent=comp146815_c0_seq1.mrna1
Chr1	gffcl	locus	160531950	160532292	.	-	.	ID=RLOC_00013090;geneIDs=comp143877_c0_seq1.path1;transcripts=comp143877_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160531950	160532292	.	-	.	ID=comp143877_c0_seq1.mrna1;geneID=comp143877_c0_seq1.path1;Name=comp143877_c0_seq1;Dir=indeterminatecoverage=89.8;identity=100.0;matches=343;mismatches=0;indels=0;unknowns=0;Target=comp143877_c0_seq1 364 22 .;CDS_Target=comp143877_c0_seq1 291 22 .;locus=RLOC_00013090
Chr1	stalkie_big_nohaplotig	exon	160531950	160532292	100	-	.	Parent=comp143877_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160532023	160532292	.	-	0	Parent=comp143877_c0_seq1.mrna1
Chr1	gffcl	locus	160546165	160546712	.	+	.	ID=RLOC_00013091;geneIDs=comp116018_c0_seq1.path1;transcripts=comp116018_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160546165	160546712	.	+	.	ID=comp116018_c0_seq1.mrna1;geneID=comp116018_c0_seq1.path1;Name=comp116018_c0_seq1;Dir=indeterminatecoverage=95.8;identity=99.3;matches=547;mismatches=1;indels=3;unknowns=0;Target=comp116018_c0_seq1 551 1 .;CDS_Target=comp116018_c0_seq1 181 2 .;locus=RLOC_00013091
Chr1	stalkie_big_nohaplotig	exon	160546165	160546712	99	+	.	Parent=comp116018_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160546166	160546345	.	+	0	Parent=comp116018_c0_seq1.mrna1
Chr1	gffcl	locus	160560959	160563052	.	-	.	ID=RLOC_00013092;geneIDs=FBgn0033860.2.path1;transcripts=FBgn0033860.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160560959	160563052	.	-	.	ID=FBgn0033860.2.mrna1;geneID=FBgn0033860.2.path1;Name=FBgn0033860.2;Dir=sensecoverage=100.0;identity=99.3;matches=1596;mismatches=12;indels=0;unknowns=0;locus=RLOC_00013092
Chr1	stalkie_big_nohaplotig	exon	160560959	160561117	98	-	.	Parent=FBgn0033860.2.mrna1;Target=FBgn0033860.2 1450 1608 +
Chr1	stalkie_big_nohaplotig	exon	160561177	160561250	100	-	.	Parent=FBgn0033860.2.mrna1;Target=FBgn0033860.2 1376 1449 +
Chr1	stalkie_big_nohaplotig	exon	160561307	160561556	99	-	.	Parent=FBgn0033860.2.mrna1;Target=FBgn0033860.2 1126 1375 +
Chr1	stalkie_big_nohaplotig	exon	160561635	160561854	99	-	.	Parent=FBgn0033860.2.mrna1;Target=FBgn0033860.2 906 1125 +
Chr1	stalkie_big_nohaplotig	exon	160561913	160562418	99	-	.	Parent=FBgn0033860.2.mrna1;Target=FBgn0033860.2 400 905 +
Chr1	stalkie_big_nohaplotig	exon	160562522	160562657	98	-	.	Parent=FBgn0033860.2.mrna1;Target=FBgn0033860.2 264 399 +
Chr1	stalkie_big_nohaplotig	exon	160562721	160562836	99	-	.	Parent=FBgn0033860.2.mrna1;Target=FBgn0033860.2 148 263 +
Chr1	stalkie_big_nohaplotig	exon	160562906	160563052	100	-	.	Parent=FBgn0033860.2.mrna1;Target=FBgn0033860.2 1 147 +
Chr1	stalkie_big_nohaplotig	CDS	160560959	160561117	.	-	0	Parent=FBgn0033860.2.mrna1;Target=FBgn0033860.2 1450 1608 +
Chr1	stalkie_big_nohaplotig	CDS	160561177	160561250	.	-	2	Parent=FBgn0033860.2.mrna1;Target=FBgn0033860.2 1376 1449 +
Chr1	stalkie_big_nohaplotig	CDS	160561307	160561556	.	-	0	Parent=FBgn0033860.2.mrna1;Target=FBgn0033860.2 1126 1375 +
Chr1	stalkie_big_nohaplotig	CDS	160561635	160561854	.	-	1	Parent=FBgn0033860.2.mrna1;Target=FBgn0033860.2 906 1125 +
Chr1	stalkie_big_nohaplotig	CDS	160561913	160562418	.	-	0	Parent=FBgn0033860.2.mrna1;Target=FBgn0033860.2 400 905 +
Chr1	stalkie_big_nohaplotig	CDS	160562522	160562657	.	-	1	Parent=FBgn0033860.2.mrna1;Target=FBgn0033860.2 264 399 +
Chr1	stalkie_big_nohaplotig	CDS	160562721	160562836	.	-	0	Parent=FBgn0033860.2.mrna1;Target=FBgn0033860.2 148 263 +
Chr1	stalkie_big_nohaplotig	CDS	160562906	160563052	.	-	0	Parent=FBgn0033860.2.mrna1;Target=FBgn0033860.2 1 147 +
Chr1	gffcl	locus	160565344	160565798	.	-	.	ID=RLOC_00013093;geneIDs=comp155947_c0_seq1.path1;transcripts=comp155947_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160565344	160565798	.	-	.	ID=comp155947_c0_seq1.mrna1;geneID=comp155947_c0_seq1.path1;Name=comp155947_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=453;mismatches=2;indels=1;unknowns=0;Target=comp155947_c0_seq1 456 1 .;CDS_Target=comp155947_c0_seq1 139 98 .;locus=RLOC_00013093
Chr1	stalkie_big_nohaplotig	exon	160565344	160565798	99	-	.	Parent=comp155947_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160565661	160565701	.	-	0	Parent=comp155947_c0_seq1.mrna1
Chr1	gffcl	locus	160567077	160573092	.	+	.	ID=RLOC_00013094;geneIDs=FBgn0259734.1.path1;transcripts=FBgn0259734.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160567077	160573092	.	+	.	ID=FBgn0259734.1.mrna1;geneID=FBgn0259734.1.path1;Name=FBgn0259734.1;Dir=sensecoverage=100.0;identity=99.5;matches=3682;mismatches=20;indels=0;unknowns=0;locus=RLOC_00013094
Chr1	stalkie_big_nohaplotig	exon	160567077	160568840	99	+	.	Parent=FBgn0259734.1.mrna1;Target=FBgn0259734.1 1 1764 +
Chr1	stalkie_big_nohaplotig	exon	160569007	160569092	100	+	.	Parent=FBgn0259734.1.mrna1;Target=FBgn0259734.1 1765 1850 +
Chr1	stalkie_big_nohaplotig	exon	160569165	160569390	99	+	.	Parent=FBgn0259734.1.mrna1;Target=FBgn0259734.1 1851 2076 +
Chr1	stalkie_big_nohaplotig	exon	160569457	160570206	99	+	.	Parent=FBgn0259734.1.mrna1;Target=FBgn0259734.1 2077 2826 +
Chr1	stalkie_big_nohaplotig	exon	160570272	160570382	99	+	.	Parent=FBgn0259734.1.mrna1;Target=FBgn0259734.1 2827 2937 +
Chr1	stalkie_big_nohaplotig	exon	160572328	160573092	99	+	.	Parent=FBgn0259734.1.mrna1;Target=FBgn0259734.1 2938 3702 +
Chr1	stalkie_big_nohaplotig	CDS	160567077	160568840	.	+	0	Parent=FBgn0259734.1.mrna1;Target=FBgn0259734.1 1 1764 +
Chr1	stalkie_big_nohaplotig	CDS	160569007	160569092	.	+	0	Parent=FBgn0259734.1.mrna1;Target=FBgn0259734.1 1765 1850 +
Chr1	stalkie_big_nohaplotig	CDS	160569165	160569390	.	+	1	Parent=FBgn0259734.1.mrna1;Target=FBgn0259734.1 1851 2076 +
Chr1	stalkie_big_nohaplotig	CDS	160569457	160570206	.	+	0	Parent=FBgn0259734.1.mrna1;Target=FBgn0259734.1 2077 2826 +
Chr1	stalkie_big_nohaplotig	CDS	160570272	160570382	.	+	0	Parent=FBgn0259734.1.mrna1;Target=FBgn0259734.1 2827 2937 +
Chr1	stalkie_big_nohaplotig	CDS	160572328	160573092	.	+	0	Parent=FBgn0259734.1.mrna1;Target=FBgn0259734.1 2938 3702 +
Chr1	stalkie_big_nohaplotig	mRNA	161741235	161741588	.	+	.	ID=comp52820_c0_seq1.mrna1;geneID=comp52820_c0_seq1.path1;Name=comp52820_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=354;mismatches=0;indels=0;unknowns=0;Target=comp52820_c0_seq1 354 1 .;CDS_Target=comp52820_c0_seq1 163 2 .;locus=RLOC_00013096
Chr1	stalkie_big_nohaplotig	exon	161741235	161741588	100	+	.	Parent=comp52820_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161741236	161741397	.	+	0	Parent=comp52820_c0_seq1.mrna1
Chr1	gffcl	locus	160667361	160667778	.	-	.	ID=RLOC_00013097;geneIDs=FBgn0031146.1.path2;transcripts=FBgn0031146.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	160667361	160667778	.	-	.	ID=FBgn0031146.1.mrna2;geneID=FBgn0031146.1.path2;Name=FBgn0031146.1;Dir=sensecoverage=100.0;identity=98.6;matches=284;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013097
Chr1	stalkie_big_nohaplotig	exon	160667361	160667411	100	-	.	Parent=FBgn0031146.1.mrna2;Target=FBgn0031146.1 238 288 +
Chr1	stalkie_big_nohaplotig	exon	160667481	160667644	98	-	.	Parent=FBgn0031146.1.mrna2;Target=FBgn0031146.1 74 237 +
Chr1	stalkie_big_nohaplotig	exon	160667706	160667778	98	-	.	Parent=FBgn0031146.1.mrna2;Target=FBgn0031146.1 1 73 +
Chr1	stalkie_big_nohaplotig	CDS	160667361	160667411	.	-	0	Parent=FBgn0031146.1.mrna2;Target=FBgn0031146.1 238 288 +
Chr1	stalkie_big_nohaplotig	CDS	160667481	160667644	.	-	2	Parent=FBgn0031146.1.mrna2;Target=FBgn0031146.1 74 237 +
Chr1	stalkie_big_nohaplotig	CDS	160667706	160667778	.	-	0	Parent=FBgn0031146.1.mrna2;Target=FBgn0031146.1 1 73 +
Chr1	gffcl	locus	160674868	160678537	.	+	.	ID=RLOC_00013098;geneIDs=FBgn0025814.1.path1;transcripts=FBgn0025814.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160674868	160678537	.	+	.	ID=FBgn0025814.1.mrna1;geneID=FBgn0025814.1.path1;Name=FBgn0025814.1;Dir=sensecoverage=100.0;identity=99.4;matches=468;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013098
Chr1	stalkie_big_nohaplotig	exon	160674868	160675017	99	+	.	Parent=FBgn0025814.1.mrna1;Target=FBgn0025814.1 1 150 +
Chr1	stalkie_big_nohaplotig	exon	160678147	160678226	100	+	.	Parent=FBgn0025814.1.mrna1;Target=FBgn0025814.1 151 230 +
Chr1	stalkie_big_nohaplotig	exon	160678297	160678537	99	+	.	Parent=FBgn0025814.1.mrna1;Target=FBgn0025814.1 231 471 +
Chr1	stalkie_big_nohaplotig	CDS	160674868	160675017	.	+	0	Parent=FBgn0025814.1.mrna1;Target=FBgn0025814.1 1 150 +
Chr1	stalkie_big_nohaplotig	CDS	160678147	160678226	.	+	0	Parent=FBgn0025814.1.mrna1;Target=FBgn0025814.1 151 230 +
Chr1	stalkie_big_nohaplotig	CDS	160678297	160678537	.	+	1	Parent=FBgn0025814.1.mrna1;Target=FBgn0025814.1 231 471 +
Chr1	gffcl	locus	160680413	160682405	.	+	.	ID=RLOC_00013099;geneIDs=FBgn0025814.2.path1;transcripts=FBgn0025814.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160680413	160682405	.	+	.	ID=FBgn0025814.2.mrna1;geneID=FBgn0025814.2.path1;Name=FBgn0025814.2;Dir=sensecoverage=100.0;identity=99.4;matches=480;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013099
Chr1	stalkie_big_nohaplotig	exon	160680413	160680571	99	+	.	Parent=FBgn0025814.2.mrna1;Target=FBgn0025814.2 1 159 +
Chr1	stalkie_big_nohaplotig	exon	160682013	160682092	97	+	.	Parent=FBgn0025814.2.mrna1;Target=FBgn0025814.2 160 239 +
Chr1	stalkie_big_nohaplotig	exon	160682162	160682405	100	+	.	Parent=FBgn0025814.2.mrna1;Target=FBgn0025814.2 240 483 +
Chr1	stalkie_big_nohaplotig	CDS	160680413	160680571	.	+	0	Parent=FBgn0025814.2.mrna1;Target=FBgn0025814.2 1 159 +
Chr1	stalkie_big_nohaplotig	CDS	160682013	160682092	.	+	0	Parent=FBgn0025814.2.mrna1;Target=FBgn0025814.2 160 239 +
Chr1	stalkie_big_nohaplotig	CDS	160682162	160682405	.	+	1	Parent=FBgn0025814.2.mrna1;Target=FBgn0025814.2 240 483 +
Chr1	gffcl	locus	160685164	160689207	.	+	.	ID=RLOC_00013100;geneIDs=FBgn0031148.2.path1,comp162099_c1_seq1.path1;transcripts=comp162099_c1_seq1.mrna1,FBgn0031148.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160685164	160689207	.	+	.	ID=comp162099_c1_seq1.mrna1;geneID=comp162099_c1_seq1.path1;Name=comp162099_c1_seq1;Dir=sensecoverage=99.1;identity=99.4;matches=1790;mismatches=11;indels=0;unknowns=0;locus=RLOC_00013100
Chr1	stalkie_big_nohaplotig	exon	160685164	160685213	98	+	.	Parent=comp162099_c1_seq1.mrna1;Target=comp162099_c1_seq1 1 50 +
Chr1	stalkie_big_nohaplotig	exon	160687222	160687345	99	+	.	Parent=comp162099_c1_seq1.mrna1;Target=comp162099_c1_seq1 51 174 +
Chr1	stalkie_big_nohaplotig	exon	160687404	160688619	99	+	.	Parent=comp162099_c1_seq1.mrna1;Target=comp162099_c1_seq1 175 1390 +
Chr1	stalkie_big_nohaplotig	exon	160688684	160688874	99	+	.	Parent=comp162099_c1_seq1.mrna1;Target=comp162099_c1_seq1 1391 1581 +
Chr1	stalkie_big_nohaplotig	exon	160688988	160689207	99	+	.	Parent=comp162099_c1_seq1.mrna1;Target=comp162099_c1_seq1 1582 1801 +
Chr1	stalkie_big_nohaplotig	CDS	160687571	160688619	.	+	0	Parent=comp162099_c1_seq1.mrna1;Target=comp162099_c1_seq1 342 1390 +
Chr1	stalkie_big_nohaplotig	CDS	160688684	160688874	.	+	1	Parent=comp162099_c1_seq1.mrna1;Target=comp162099_c1_seq1 1391 1581 +
Chr1	stalkie_big_nohaplotig	CDS	160688988	160689100	.	+	2	Parent=comp162099_c1_seq1.mrna1;Target=comp162099_c1_seq1 1582 1694 +
Chr1	stalkie_big_nohaplotig	mRNA	160685165	160689097	.	+	.	ID=FBgn0031148.2.mrna1;geneID=FBgn0031148.2.path1;Name=FBgn0031148.2;Dir=sensecoverage=100.0;identity=99.3;matches=1609;mismatches=11;indels=0;unknowns=0;locus=RLOC_00013100
Chr1	stalkie_big_nohaplotig	exon	160685165	160685213	97	+	.	Parent=FBgn0031148.2.mrna1;Target=FBgn0031148.2 1 49 +
Chr1	stalkie_big_nohaplotig	exon	160687222	160687345	99	+	.	Parent=FBgn0031148.2.mrna1;Target=FBgn0031148.2 50 173 +
Chr1	stalkie_big_nohaplotig	exon	160687404	160687510	100	+	.	Parent=FBgn0031148.2.mrna1;Target=FBgn0031148.2 174 280 +
Chr1	stalkie_big_nohaplotig	exon	160687581	160688619	99	+	.	Parent=FBgn0031148.2.mrna1;Target=FBgn0031148.2 281 1319 +
Chr1	stalkie_big_nohaplotig	exon	160688684	160688874	99	+	.	Parent=FBgn0031148.2.mrna1;Target=FBgn0031148.2 1320 1510 +
Chr1	stalkie_big_nohaplotig	exon	160688988	160689097	99	+	.	Parent=FBgn0031148.2.mrna1;Target=FBgn0031148.2 1511 1620 +
Chr1	stalkie_big_nohaplotig	CDS	160685165	160685213	.	+	0	Parent=FBgn0031148.2.mrna1;Target=FBgn0031148.2 1 49 +
Chr1	stalkie_big_nohaplotig	CDS	160687222	160687345	.	+	2	Parent=FBgn0031148.2.mrna1;Target=FBgn0031148.2 50 173 +
Chr1	stalkie_big_nohaplotig	CDS	160687404	160687510	.	+	1	Parent=FBgn0031148.2.mrna1;Target=FBgn0031148.2 174 280 +
Chr1	stalkie_big_nohaplotig	CDS	160687581	160688619	.	+	2	Parent=FBgn0031148.2.mrna1;Target=FBgn0031148.2 281 1319 +
Chr1	stalkie_big_nohaplotig	CDS	160688684	160688874	.	+	1	Parent=FBgn0031148.2.mrna1;Target=FBgn0031148.2 1320 1510 +
Chr1	stalkie_big_nohaplotig	CDS	160688988	160689097	.	+	2	Parent=FBgn0031148.2.mrna1;Target=FBgn0031148.2 1511 1620 +
Chr1	gffcl	locus	160692972	160694931	.	+	.	ID=RLOC_00013101;geneIDs=FBgn0031148.1.path1;transcripts=FBgn0031148.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160692972	160694931	.	+	.	ID=FBgn0031148.1.mrna1;geneID=FBgn0031148.1.path1;Name=FBgn0031148.1;Dir=sensecoverage=99.9;identity=99.6;matches=1626;mismatches=6;indels=1;unknowns=0;locus=RLOC_00013101
Chr1	stalkie_big_nohaplotig	exon	160692972	160693093	99	+	.	Parent=FBgn0031148.1.mrna1;Target=FBgn0031148.1 1 122 +
Chr1	stalkie_big_nohaplotig	exon	160693156	160693262	99	+	.	Parent=FBgn0031148.1.mrna1;Target=FBgn0031148.1 123 229 +
Chr1	stalkie_big_nohaplotig	exon	160693329	160694367	99	+	.	Parent=FBgn0031148.1.mrna1;Target=FBgn0031148.1 230 1268 +
Chr1	stalkie_big_nohaplotig	exon	160694444	160694631	100	+	.	Parent=FBgn0031148.1.mrna1;Target=FBgn0031148.1 1269 1456 +
Chr1	stalkie_big_nohaplotig	exon	160694691	160694771	98	+	.	Parent=FBgn0031148.1.mrna1;Target=FBgn0031148.1 1457 1537 +
Chr1	stalkie_big_nohaplotig	exon	160694837	160694931	98	+	.	Parent=FBgn0031148.1.mrna1;Target=FBgn0031148.1 1538 1633 +
Chr1	stalkie_big_nohaplotig	CDS	160692972	160693093	.	+	0	Parent=FBgn0031148.1.mrna1;Target=FBgn0031148.1 1 122 +
Chr1	stalkie_big_nohaplotig	CDS	160693156	160693262	.	+	1	Parent=FBgn0031148.1.mrna1;Target=FBgn0031148.1 123 229 +
Chr1	stalkie_big_nohaplotig	CDS	160693329	160694367	.	+	2	Parent=FBgn0031148.1.mrna1;Target=FBgn0031148.1 230 1268 +
Chr1	stalkie_big_nohaplotig	CDS	160694444	160694631	.	+	1	Parent=FBgn0031148.1.mrna1;Target=FBgn0031148.1 1269 1456 +
Chr1	stalkie_big_nohaplotig	CDS	160694691	160694771	.	+	2	Parent=FBgn0031148.1.mrna1;Target=FBgn0031148.1 1457 1537 +
Chr1	stalkie_big_nohaplotig	CDS	160694837	160694930	.	+	2	Parent=FBgn0031148.1.mrna1;Target=FBgn0031148.1 1538 1632 +
Chr1	gffcl	locus	160695675	160699751	.	-	.	ID=RLOC_00013102;geneIDs=FBgn0031149.1.path1;transcripts=FBgn0031149.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160695675	160699751	.	-	.	ID=FBgn0031149.1.mrna1;geneID=FBgn0031149.1.path1;Name=FBgn0031149.1;Dir=sensecoverage=100.0;identity=99.0;matches=2143;mismatches=12;indels=10;unknowns=0;locus=RLOC_00013102
Chr1	stalkie_big_nohaplotig	exon	160695675	160696226	99	-	.	Parent=FBgn0031149.1.mrna1;Target=FBgn0031149.1 1609 2160 +
Chr1	stalkie_big_nohaplotig	exon	160696414	160696779	99	-	.	Parent=FBgn0031149.1.mrna1;Target=FBgn0031149.1 1243 1608 +
Chr1	stalkie_big_nohaplotig	exon	160696845	160696949	90	-	.	Parent=FBgn0031149.1.mrna1;Target=FBgn0031149.1 1138 1242 +
Chr1	stalkie_big_nohaplotig	exon	160697210	160697497	98	-	.	Parent=FBgn0031149.1.mrna1;Target=FBgn0031149.1 850 1137 +
Chr1	stalkie_big_nohaplotig	exon	160697563	160697952	98	-	.	Parent=FBgn0031149.1.mrna1;Target=FBgn0031149.1 460 849 +
Chr1	stalkie_big_nohaplotig	exon	160698166	160698494	100	-	.	Parent=FBgn0031149.1.mrna1;Target=FBgn0031149.1 131 459 +
Chr1	stalkie_big_nohaplotig	exon	160699622	160699751	100	-	.	Parent=FBgn0031149.1.mrna1;Target=FBgn0031149.1 1 130 +
Chr1	stalkie_big_nohaplotig	CDS	160695675	160696226	.	-	0	Parent=FBgn0031149.1.mrna1;Target=FBgn0031149.1 1609 2160 +
Chr1	stalkie_big_nohaplotig	CDS	160696414	160696779	.	-	0	Parent=FBgn0031149.1.mrna1;Target=FBgn0031149.1 1243 1608 +
Chr1	stalkie_big_nohaplotig	CDS	160696845	160696949	.	-	0	Parent=FBgn0031149.1.mrna1;Target=FBgn0031149.1 1138 1242 +
Chr1	stalkie_big_nohaplotig	CDS	160697210	160697497	.	-	0	Parent=FBgn0031149.1.mrna1;Target=FBgn0031149.1 850 1137 +
Chr1	stalkie_big_nohaplotig	CDS	160697563	160697952	.	-	0	Parent=FBgn0031149.1.mrna1;Target=FBgn0031149.1 460 849 +
Chr1	stalkie_big_nohaplotig	CDS	160698166	160698494	.	-	2	Parent=FBgn0031149.1.mrna1;Target=FBgn0031149.1 131 459 +
Chr1	stalkie_big_nohaplotig	CDS	160699622	160699751	.	-	0	Parent=FBgn0031149.1.mrna1;Target=FBgn0031149.1 1 130 +
Chr1	gffcl	locus	160700625	160708208	.	+	.	ID=RLOC_00013103;geneIDs=FBgn0001612.1.path1;transcripts=FBgn0001612.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160700625	160708208	.	+	.	ID=FBgn0001612.1.mrna1;geneID=FBgn0001612.1.path1;Name=FBgn0001612.1;Dir=sensecoverage=100.0;identity=99.8;matches=2821;mismatches=5;indels=0;unknowns=0;locus=RLOC_00013103
Chr1	stalkie_big_nohaplotig	exon	160700625	160700751	100	+	.	Parent=FBgn0001612.1.mrna1;Target=FBgn0001612.1 1 127 +
Chr1	stalkie_big_nohaplotig	exon	160700810	160701081	100	+	.	Parent=FBgn0001612.1.mrna1;Target=FBgn0001612.1 128 399 +
Chr1	stalkie_big_nohaplotig	exon	160701158	160701346	100	+	.	Parent=FBgn0001612.1.mrna1;Target=FBgn0001612.1 400 588 +
Chr1	stalkie_big_nohaplotig	exon	160701408	160701745	99	+	.	Parent=FBgn0001612.1.mrna1;Target=FBgn0001612.1 589 926 +
Chr1	stalkie_big_nohaplotig	exon	160701812	160701953	100	+	.	Parent=FBgn0001612.1.mrna1;Target=FBgn0001612.1 927 1068 +
Chr1	stalkie_big_nohaplotig	exon	160702014	160702536	99	+	.	Parent=FBgn0001612.1.mrna1;Target=FBgn0001612.1 1069 1591 +
Chr1	stalkie_big_nohaplotig	exon	160702600	160702792	100	+	.	Parent=FBgn0001612.1.mrna1;Target=FBgn0001612.1 1592 1784 +
Chr1	stalkie_big_nohaplotig	exon	160702849	160703170	99	+	.	Parent=FBgn0001612.1.mrna1;Target=FBgn0001612.1 1785 2106 +
Chr1	stalkie_big_nohaplotig	exon	160707489	160708208	99	+	.	Parent=FBgn0001612.1.mrna1;Target=FBgn0001612.1 2107 2826 +
Chr1	stalkie_big_nohaplotig	CDS	160700625	160700751	.	+	0	Parent=FBgn0001612.1.mrna1;Target=FBgn0001612.1 1 127 +
Chr1	stalkie_big_nohaplotig	CDS	160700810	160701081	.	+	2	Parent=FBgn0001612.1.mrna1;Target=FBgn0001612.1 128 399 +
Chr1	stalkie_big_nohaplotig	CDS	160701158	160701346	.	+	0	Parent=FBgn0001612.1.mrna1;Target=FBgn0001612.1 400 588 +
Chr1	stalkie_big_nohaplotig	CDS	160701408	160701745	.	+	0	Parent=FBgn0001612.1.mrna1;Target=FBgn0001612.1 589 926 +
Chr1	stalkie_big_nohaplotig	CDS	160701812	160701953	.	+	1	Parent=FBgn0001612.1.mrna1;Target=FBgn0001612.1 927 1068 +
Chr1	stalkie_big_nohaplotig	CDS	160702014	160702536	.	+	0	Parent=FBgn0001612.1.mrna1;Target=FBgn0001612.1 1069 1591 +
Chr1	stalkie_big_nohaplotig	CDS	160702600	160702792	.	+	2	Parent=FBgn0001612.1.mrna1;Target=FBgn0001612.1 1592 1784 +
Chr1	stalkie_big_nohaplotig	CDS	160702849	160703170	.	+	1	Parent=FBgn0001612.1.mrna1;Target=FBgn0001612.1 1785 2106 +
Chr1	stalkie_big_nohaplotig	CDS	160707489	160708208	.	+	0	Parent=FBgn0001612.1.mrna1;Target=FBgn0001612.1 2107 2826 +
Chr1	gffcl	locus	160704615	160705408	.	.	.	ID=RLOC_00013104;geneIDs=FBgn0030519.1.path1,comp155895_c0_seq1.path1;transcripts=FBgn0030519.1.mrna1,comp155895_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160704615	160705408	.	-	.	ID=FBgn0030519.1.mrna1;geneID=FBgn0030519.1.path1;Name=FBgn0030519.1;Dir=sensecoverage=100.0;identity=99.6;matches=487;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013104
Chr1	stalkie_big_nohaplotig	exon	160704615	160704826	99	-	.	Parent=FBgn0030519.1.mrna1;Target=FBgn0030519.1 278 489 +
Chr1	stalkie_big_nohaplotig	exon	160705052	160705213	100	-	.	Parent=FBgn0030519.1.mrna1;Target=FBgn0030519.1 116 277 +
Chr1	stalkie_big_nohaplotig	exon	160705294	160705408	99	-	.	Parent=FBgn0030519.1.mrna1;Target=FBgn0030519.1 1 115 +
Chr1	stalkie_big_nohaplotig	CDS	160704615	160704826	.	-	2	Parent=FBgn0030519.1.mrna1;Target=FBgn0030519.1 278 489 +
Chr1	stalkie_big_nohaplotig	CDS	160705052	160705213	.	-	2	Parent=FBgn0030519.1.mrna1;Target=FBgn0030519.1 116 277 +
Chr1	stalkie_big_nohaplotig	CDS	160705294	160705408	.	-	0	Parent=FBgn0030519.1.mrna1;Target=FBgn0030519.1 1 115 +
Chr1	stalkie_big_nohaplotig	mRNA	160704804	160705099	.	+	.	ID=comp155895_c0_seq1.mrna1;geneID=comp155895_c0_seq1.path1;Name=comp155895_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=291;mismatches=5;indels=2;unknowns=0;Target=comp155895_c0_seq1 298 1 .;CDS_Target=comp155895_c0_seq1 79 2 .;locus=RLOC_00013104
Chr1	stalkie_big_nohaplotig	exon	160704804	160705099	97	+	.	Parent=comp155895_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160704805	160704881	.	+	0	Parent=comp155895_c0_seq1.mrna1
Chr1	gffcl	locus	160711452	160722144	.	-	.	ID=RLOC_00013105;geneIDs=FBgn0001087.1.path1;transcripts=FBgn0001087.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160711452	160722144	.	-	.	ID=FBgn0001087.1.mrna1;geneID=FBgn0001087.1.path1;Name=FBgn0001087.1;Dir=sensecoverage=100.0;identity=99.7;matches=3076;mismatches=8;indels=0;unknowns=0;locus=RLOC_00013105
Chr1	stalkie_big_nohaplotig	exon	160711452	160711938	99	-	.	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 2598 3084 +
Chr1	stalkie_big_nohaplotig	exon	160711991	160712123	100	-	.	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 2465 2597 +
Chr1	stalkie_big_nohaplotig	exon	160712557	160712688	100	-	.	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 2333 2464 +
Chr1	stalkie_big_nohaplotig	exon	160712760	160713444	99	-	.	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 1648 2332 +
Chr1	stalkie_big_nohaplotig	exon	160713506	160713662	100	-	.	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 1491 1647 +
Chr1	stalkie_big_nohaplotig	exon	160713724	160713895	99	-	.	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 1319 1490 +
Chr1	stalkie_big_nohaplotig	exon	160713958	160714305	99	-	.	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 971 1318 +
Chr1	stalkie_big_nohaplotig	exon	160714375	160714523	100	-	.	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 822 970 +
Chr1	stalkie_big_nohaplotig	exon	160714859	160714932	100	-	.	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 748 821 +
Chr1	stalkie_big_nohaplotig	exon	160718638	160718777	100	-	.	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 608 747 +
Chr1	stalkie_big_nohaplotig	exon	160718847	160718976	100	-	.	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 478 607 +
Chr1	stalkie_big_nohaplotig	exon	160719071	160719211	100	-	.	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 337 477 +
Chr1	stalkie_big_nohaplotig	exon	160719356	160719484	100	-	.	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 208 336 +
Chr1	stalkie_big_nohaplotig	exon	160719722	160719817	98	-	.	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 112 207 +
Chr1	stalkie_big_nohaplotig	exon	160722034	160722144	99	-	.	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 1 111 +
Chr1	stalkie_big_nohaplotig	CDS	160711452	160711938	.	-	1	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 2598 3084 +
Chr1	stalkie_big_nohaplotig	CDS	160711991	160712123	.	-	2	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 2465 2597 +
Chr1	stalkie_big_nohaplotig	CDS	160712557	160712688	.	-	2	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 2333 2464 +
Chr1	stalkie_big_nohaplotig	CDS	160712760	160713444	.	-	0	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 1648 2332 +
Chr1	stalkie_big_nohaplotig	CDS	160713506	160713662	.	-	1	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 1491 1647 +
Chr1	stalkie_big_nohaplotig	CDS	160713724	160713895	.	-	2	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 1319 1490 +
Chr1	stalkie_big_nohaplotig	CDS	160713958	160714305	.	-	2	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 971 1318 +
Chr1	stalkie_big_nohaplotig	CDS	160714375	160714523	.	-	1	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 822 970 +
Chr1	stalkie_big_nohaplotig	CDS	160714859	160714932	.	-	0	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 748 821 +
Chr1	stalkie_big_nohaplotig	CDS	160718638	160718777	.	-	2	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 608 747 +
Chr1	stalkie_big_nohaplotig	CDS	160718847	160718976	.	-	0	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 478 607 +
Chr1	stalkie_big_nohaplotig	CDS	160719071	160719211	.	-	0	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 337 477 +
Chr1	stalkie_big_nohaplotig	CDS	160719356	160719484	.	-	0	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 208 336 +
Chr1	stalkie_big_nohaplotig	CDS	160719722	160719817	.	-	0	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 112 207 +
Chr1	stalkie_big_nohaplotig	CDS	160722034	160722144	.	-	0	Parent=FBgn0001087.1.mrna1;Target=FBgn0001087.1 1 111 +
Chr1	gffcl	locus	160725101	160725627	.	-	.	ID=RLOC_00013106;geneIDs=FBgn0029959.1.path1;transcripts=FBgn0029959.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160725101	160725627	.	-	.	ID=FBgn0029959.1.mrna1;geneID=FBgn0029959.1.path1;Name=FBgn0029959.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=526;mismatches=1;indels=1;unknowns=0;Target=FBgn0029959.1 528 1 .;CDS_Target=FBgn0029959.1 53 3 .;locus=RLOC_00013106
Chr1	stalkie_big_nohaplotig	exon	160725101	160725627	99	-	.	Parent=FBgn0029959.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160725576	160725625	.	-	0	Parent=FBgn0029959.1.mrna1
Chr1	gffcl	locus	160727960	160728952	.	+	.	ID=RLOC_00013107;geneIDs=FBgn0030851.1.path1;transcripts=FBgn0030851.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160727960	160728952	.	+	.	ID=FBgn0030851.1.mrna1;geneID=FBgn0030851.1.path1;Name=FBgn0030851.1;Dir=sensecoverage=100.0;identity=99.4;matches=787;mismatches=4;indels=1;unknowns=0;locus=RLOC_00013107
Chr1	stalkie_big_nohaplotig	exon	160727960	160728069	99	+	.	Parent=FBgn0030851.1.mrna1;Target=FBgn0030851.1 1 110 +
Chr1	stalkie_big_nohaplotig	exon	160728137	160728653	99	+	.	Parent=FBgn0030851.1.mrna1;Target=FBgn0030851.1 111 627 +
Chr1	stalkie_big_nohaplotig	exon	160728708	160728836	98	+	.	Parent=FBgn0030851.1.mrna1;Target=FBgn0030851.1 628 756 +
Chr1	stalkie_big_nohaplotig	exon	160728918	160728952	97	+	.	Parent=FBgn0030851.1.mrna1;Target=FBgn0030851.1 757 792 +
Chr1	stalkie_big_nohaplotig	CDS	160727960	160728069	.	+	0	Parent=FBgn0030851.1.mrna1;Target=FBgn0030851.1 1 110 +
Chr1	stalkie_big_nohaplotig	CDS	160728137	160728653	.	+	1	Parent=FBgn0030851.1.mrna1;Target=FBgn0030851.1 111 627 +
Chr1	stalkie_big_nohaplotig	CDS	160728708	160728836	.	+	0	Parent=FBgn0030851.1.mrna1;Target=FBgn0030851.1 628 756 +
Chr1	stalkie_big_nohaplotig	CDS	160728918	160728952	.	+	0	Parent=FBgn0030851.1.mrna1;Target=FBgn0030851.1 757 792 +
Chr1	gffcl	locus	160729373	160729777	.	-	.	ID=RLOC_00013108;geneIDs=FBgn0027359.1.path1;transcripts=FBgn0027359.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160729373	160729777	.	-	.	ID=FBgn0027359.1.mrna1;geneID=FBgn0027359.1.path1;Name=FBgn0027359.1;Dir=sensecoverage=100.0;identity=100.0;matches=351;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013108
Chr1	stalkie_big_nohaplotig	exon	160729373	160729540	100	-	.	Parent=FBgn0027359.1.mrna1;Target=FBgn0027359.1 184 351 +
Chr1	stalkie_big_nohaplotig	exon	160729595	160729777	100	-	.	Parent=FBgn0027359.1.mrna1;Target=FBgn0027359.1 1 183 +
Chr1	stalkie_big_nohaplotig	CDS	160729373	160729540	.	-	0	Parent=FBgn0027359.1.mrna1;Target=FBgn0027359.1 184 351 +
Chr1	stalkie_big_nohaplotig	CDS	160729595	160729777	.	-	0	Parent=FBgn0027359.1.mrna1;Target=FBgn0027359.1 1 183 +
Chr1	gffcl	locus	160730253	160730672	.	+	.	ID=RLOC_00013109;geneIDs=FBgn0030294.1.path1;transcripts=FBgn0030294.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160730253	160730672	.	+	.	ID=FBgn0030294.1.mrna1;geneID=FBgn0030294.1.path1;Name=FBgn0030294.1;Dir=sensecoverage=100.0;identity=99.4;matches=358;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013109
Chr1	stalkie_big_nohaplotig	exon	160730253	160730455	99	+	.	Parent=FBgn0030294.1.mrna1;Target=FBgn0030294.1 1 203 +
Chr1	stalkie_big_nohaplotig	exon	160730516	160730672	99	+	.	Parent=FBgn0030294.1.mrna1;Target=FBgn0030294.1 204 360 +
Chr1	stalkie_big_nohaplotig	CDS	160730253	160730455	.	+	0	Parent=FBgn0030294.1.mrna1;Target=FBgn0030294.1 1 203 +
Chr1	stalkie_big_nohaplotig	CDS	160730516	160730672	.	+	1	Parent=FBgn0030294.1.mrna1;Target=FBgn0030294.1 204 360 +
Chr1	gffcl	locus	160733976	160739960	.	-	.	ID=RLOC_00013110;geneIDs=FBgn0004864.1.path1;transcripts=FBgn0004864.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160733976	160739960	.	-	.	ID=FBgn0004864.1.mrna1;geneID=FBgn0004864.1.path1;Name=FBgn0004864.1;Dir=sensecoverage=100.0;identity=99.8;matches=3542;mismatches=7;indels=0;unknowns=0;locus=RLOC_00013110
Chr1	stalkie_big_nohaplotig	exon	160733976	160734120	100	-	.	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 3405 3549 +
Chr1	stalkie_big_nohaplotig	exon	160734187	160734354	100	-	.	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 3237 3404 +
Chr1	stalkie_big_nohaplotig	exon	160734704	160734870	100	-	.	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 3070 3236 +
Chr1	stalkie_big_nohaplotig	exon	160734956	160735120	100	-	.	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 2905 3069 +
Chr1	stalkie_big_nohaplotig	exon	160735246	160735610	98	-	.	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 2540 2904 +
Chr1	stalkie_big_nohaplotig	exon	160735670	160736052	100	-	.	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 2157 2539 +
Chr1	stalkie_big_nohaplotig	exon	160736110	160736240	98	-	.	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 2026 2156 +
Chr1	stalkie_big_nohaplotig	exon	160736319	160736653	100	-	.	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 1691 2025 +
Chr1	stalkie_big_nohaplotig	exon	160736719	160736856	100	-	.	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 1553 1690 +
Chr1	stalkie_big_nohaplotig	exon	160736928	160737106	100	-	.	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 1374 1552 +
Chr1	stalkie_big_nohaplotig	exon	160737177	160737290	100	-	.	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 1260 1373 +
Chr1	stalkie_big_nohaplotig	exon	160737713	160737805	98	-	.	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 1167 1259 +
Chr1	stalkie_big_nohaplotig	exon	160737877	160738037	100	-	.	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 1006 1166 +
Chr1	stalkie_big_nohaplotig	exon	160738956	160739960	100	-	.	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 1 1005 +
Chr1	stalkie_big_nohaplotig	CDS	160733976	160734120	.	-	1	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 3405 3549 +
Chr1	stalkie_big_nohaplotig	CDS	160734187	160734354	.	-	1	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 3237 3404 +
Chr1	stalkie_big_nohaplotig	CDS	160734704	160734870	.	-	0	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 3070 3236 +
Chr1	stalkie_big_nohaplotig	CDS	160734956	160735120	.	-	0	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 2905 3069 +
Chr1	stalkie_big_nohaplotig	CDS	160735246	160735610	.	-	2	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 2540 2904 +
Chr1	stalkie_big_nohaplotig	CDS	160735670	160736052	.	-	1	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 2157 2539 +
Chr1	stalkie_big_nohaplotig	CDS	160736110	160736240	.	-	0	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 2026 2156 +
Chr1	stalkie_big_nohaplotig	CDS	160736319	160736653	.	-	2	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 1691 2025 +
Chr1	stalkie_big_nohaplotig	CDS	160736719	160736856	.	-	2	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 1553 1690 +
Chr1	stalkie_big_nohaplotig	CDS	160736928	160737106	.	-	1	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 1374 1552 +
Chr1	stalkie_big_nohaplotig	CDS	160737177	160737290	.	-	1	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 1260 1373 +
Chr1	stalkie_big_nohaplotig	CDS	160737713	160737805	.	-	1	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 1167 1259 +
Chr1	stalkie_big_nohaplotig	CDS	160737877	160738037	.	-	0	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 1006 1166 +
Chr1	stalkie_big_nohaplotig	CDS	160738956	160739960	.	-	0	Parent=FBgn0004864.1.mrna1;Target=FBgn0004864.1 1 1005 +
Chr1	gffcl	locus	160740762	160742088	.	-	.	ID=RLOC_00013111;geneIDs=comp158076_c0_seq1.path1;transcripts=comp158076_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160740762	160742088	.	-	.	ID=comp158076_c0_seq1.mrna1;geneID=comp158076_c0_seq1.path1;Name=comp158076_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=1305;mismatches=22;indels=12;unknowns=0;Target=comp158076_c0_seq1 1339 1 .;CDS_Target=comp158076_c0_seq1 481 143 .;locus=RLOC_00013111
Chr1	stalkie_big_nohaplotig	exon	160740762	160742088	97	-	.	Parent=comp158076_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160741608	160741946	.	-	0	Parent=comp158076_c0_seq1.mrna1
Chr1	gffcl	locus	160742478	160743647	.	-	.	ID=RLOC_00013112;geneIDs=ORF1636.path1;transcripts=ORF1636.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160742478	160743647	.	-	.	ID=ORF1636.mrna1;geneID=ORF1636.path1;Name=ORF1636;Dir=sensecoverage=100.0;identity=98.5;matches=1025;mismatches=15;indels=1;unknowns=0;Target=ORF1636 3 134 +;locus=RLOC_00013112
Chr1	stalkie_big_nohaplotig	exon	160742478	160742924	98	-	.	Parent=ORF1636.mrna1;Target=ORF1636 595 1041 +
Chr1	stalkie_big_nohaplotig	exon	160742983	160743152	100	-	.	Parent=ORF1636.mrna1;Target=ORF1636 425 594 +
Chr1	stalkie_big_nohaplotig	exon	160743225	160743647	98	-	.	Parent=ORF1636.mrna1;Target=ORF1636 1 424 +
Chr1	stalkie_big_nohaplotig	CDS	160743515	160743645	.	-	0	Parent=ORF1636.mrna1
Chr1	gffcl	locus	160756585	160769014	.	+	.	ID=RLOC_00013114;geneIDs=FBgn0001145.1.path1;transcripts=FBgn0001145.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160756585	160769014	.	+	.	ID=FBgn0001145.1.mrna1;geneID=FBgn0001145.1.path1;Name=FBgn0001145.1;Dir=sensecoverage=100.0;identity=99.7;matches=1119;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013114
Chr1	stalkie_big_nohaplotig	exon	160756585	160756598	100	+	.	Parent=FBgn0001145.1.mrna1;Target=FBgn0001145.1 1 14 +
Chr1	stalkie_big_nohaplotig	exon	160756705	160756889	100	+	.	Parent=FBgn0001145.1.mrna1;Target=FBgn0001145.1 15 199 +
Chr1	stalkie_big_nohaplotig	exon	160767905	160768245	99	+	.	Parent=FBgn0001145.1.mrna1;Target=FBgn0001145.1 200 540 +
Chr1	stalkie_big_nohaplotig	exon	160768306	160768497	99	+	.	Parent=FBgn0001145.1.mrna1;Target=FBgn0001145.1 541 732 +
Chr1	stalkie_big_nohaplotig	exon	160768562	160768665	100	+	.	Parent=FBgn0001145.1.mrna1;Target=FBgn0001145.1 733 836 +
Chr1	stalkie_big_nohaplotig	exon	160768729	160769014	99	+	.	Parent=FBgn0001145.1.mrna1;Target=FBgn0001145.1 837 1122 +
Chr1	stalkie_big_nohaplotig	CDS	160756585	160756598	.	+	0	Parent=FBgn0001145.1.mrna1;Target=FBgn0001145.1 1 14 +
Chr1	stalkie_big_nohaplotig	CDS	160756705	160756889	.	+	1	Parent=FBgn0001145.1.mrna1;Target=FBgn0001145.1 15 199 +
Chr1	stalkie_big_nohaplotig	CDS	160767905	160768245	.	+	2	Parent=FBgn0001145.1.mrna1;Target=FBgn0001145.1 200 540 +
Chr1	stalkie_big_nohaplotig	CDS	160768306	160768497	.	+	0	Parent=FBgn0001145.1.mrna1;Target=FBgn0001145.1 541 732 +
Chr1	stalkie_big_nohaplotig	CDS	160768562	160768665	.	+	0	Parent=FBgn0001145.1.mrna1;Target=FBgn0001145.1 733 836 +
Chr1	stalkie_big_nohaplotig	CDS	160768729	160769014	.	+	1	Parent=FBgn0001145.1.mrna1;Target=FBgn0001145.1 837 1122 +
Chr1	gffcl	locus	160764011	160765409	.	-	.	ID=RLOC_00013115;geneIDs=comp160918_c0_seq1.path1;transcripts=comp160918_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160764011	160765409	.	-	.	ID=comp160918_c0_seq1.mrna1;geneID=comp160918_c0_seq1.path1;Name=comp160918_c0_seq1;Dir=indeterminatecoverage=99.4;identity=92.6;matches=1355;mismatches=44;indels=65;unknowns=0;Target=comp160918_c0_seq1 1473 10 .;CDS_Target=comp160918_c0_seq1 362 279 .;locus=RLOC_00013115
Chr1	stalkie_big_nohaplotig	exon	160764011	160765409	92	-	.	Parent=comp160918_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160765073	160765154	.	-	0	Parent=comp160918_c0_seq1.mrna1
Chr1	gffcl	locus	160766173	160766794	.	+	.	ID=RLOC_00013116;geneIDs=comp147109_c0_seq1.path1;transcripts=comp147109_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160766173	160766794	.	+	.	ID=comp147109_c0_seq1.mrna1;geneID=comp147109_c0_seq1.path1;Name=comp147109_c0_seq1;Dir=indeterminatecoverage=98.1;identity=98.2;matches=612;mismatches=9;indels=2;unknowns=0;Target=comp147109_c0_seq1 634 13 .;CDS_Target=comp147109_c0_seq1 41 15 .;locus=RLOC_00013116
Chr1	stalkie_big_nohaplotig	exon	160766173	160766794	98	+	.	Parent=comp147109_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160766175	160766201	.	+	0	Parent=comp147109_c0_seq1.mrna1
Chr1	gffcl	locus	160771535	160779779	.	-	.	ID=RLOC_00013117;geneIDs=FBgn0262740.1.path1;transcripts=FBgn0262740.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160771535	160779779	.	-	.	ID=FBgn0262740.1.mrna1;geneID=FBgn0262740.1.path1;Name=FBgn0262740.1;Dir=sensecoverage=100.0;identity=99.7;matches=2411;mismatches=7;indels=0;unknowns=0;locus=RLOC_00013117
Chr1	stalkie_big_nohaplotig	exon	160771535	160771633	100	-	.	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 2320 2418 +
Chr1	stalkie_big_nohaplotig	exon	160775537	160775641	100	-	.	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 2215 2319 +
Chr1	stalkie_big_nohaplotig	exon	160775698	160775815	100	-	.	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 2097 2214 +
Chr1	stalkie_big_nohaplotig	exon	160776068	160776213	100	-	.	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 1951 2096 +
Chr1	stalkie_big_nohaplotig	exon	160776265	160776777	99	-	.	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 1438 1950 +
Chr1	stalkie_big_nohaplotig	exon	160777246	160777263	100	-	.	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 1420 1437 +
Chr1	stalkie_big_nohaplotig	exon	160777471	160777585	100	-	.	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 1305 1419 +
Chr1	stalkie_big_nohaplotig	exon	160777645	160777925	99	-	.	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 1024 1304 +
Chr1	stalkie_big_nohaplotig	exon	160777992	160778186	100	-	.	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 829 1023 +
Chr1	stalkie_big_nohaplotig	exon	160778264	160778428	100	-	.	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 664 828 +
Chr1	stalkie_big_nohaplotig	exon	160778974	160779235	99	-	.	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 402 663 +
Chr1	stalkie_big_nohaplotig	exon	160779306	160779441	100	-	.	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 266 401 +
Chr1	stalkie_big_nohaplotig	exon	160779515	160779779	99	-	.	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 1 265 +
Chr1	stalkie_big_nohaplotig	CDS	160771535	160771633	.	-	0	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 2320 2418 +
Chr1	stalkie_big_nohaplotig	CDS	160775537	160775641	.	-	0	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 2215 2319 +
Chr1	stalkie_big_nohaplotig	CDS	160775698	160775815	.	-	1	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 2097 2214 +
Chr1	stalkie_big_nohaplotig	CDS	160776068	160776213	.	-	0	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 1951 2096 +
Chr1	stalkie_big_nohaplotig	CDS	160776265	160776777	.	-	0	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 1438 1950 +
Chr1	stalkie_big_nohaplotig	CDS	160777246	160777263	.	-	0	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 1420 1437 +
Chr1	stalkie_big_nohaplotig	CDS	160777471	160777585	.	-	1	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 1305 1419 +
Chr1	stalkie_big_nohaplotig	CDS	160777645	160777925	.	-	0	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 1024 1304 +
Chr1	stalkie_big_nohaplotig	CDS	160777992	160778186	.	-	0	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 829 1023 +
Chr1	stalkie_big_nohaplotig	CDS	160778264	160778428	.	-	0	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 664 828 +
Chr1	stalkie_big_nohaplotig	CDS	160778974	160779235	.	-	1	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 402 663 +
Chr1	stalkie_big_nohaplotig	CDS	160779306	160779441	.	-	2	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 266 401 +
Chr1	stalkie_big_nohaplotig	CDS	160779515	160779779	.	-	0	Parent=FBgn0262740.1.mrna1;Target=FBgn0262740.1 1 265 +
Chr1	gffcl	locus	160771798	160772365	.	-	.	ID=RLOC_00013118;geneIDs=comp150370_c0_seq1.path1;transcripts=comp150370_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160771798	160772365	.	-	.	ID=comp150370_c0_seq1.mrna1;geneID=comp150370_c0_seq1.path1;Name=comp150370_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.7;matches=559;mismatches=9;indels=4;unknowns=0;Target=comp150370_c0_seq1 572 1 .;CDS_Target=comp150370_c0_seq1 159 1 .;locus=RLOC_00013118
Chr1	stalkie_big_nohaplotig	exon	160771798	160772365	97	-	.	Parent=comp150370_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160772207	160772365	.	-	0	Parent=comp150370_c0_seq1.mrna1
Chr1	gffcl	locus	160773275	160773625	.	+	.	ID=RLOC_00013119;geneIDs=comp149477_c0_seq1.path1;transcripts=comp149477_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160773275	160773625	.	+	.	ID=comp149477_c0_seq1.mrna1;geneID=comp149477_c0_seq1.path1;Name=comp149477_c0_seq1;Dir=indeterminatecoverage=58.6;identity=100.0;matches=351;mismatches=0;indels=0;unknowns=0;Target=comp149477_c0_seq1 351 1 .;CDS_Target=comp149477_c0_seq1 69 1 .;locus=RLOC_00013119
Chr1	stalkie_big_nohaplotig	exon	160773275	160773625	100	+	.	Parent=comp149477_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160773275	160773343	.	+	0	Parent=comp149477_c0_seq1.mrna1
Chr1	gffcl	locus	160806026	160806642	.	+	.	ID=RLOC_00013121;geneIDs=FBgn0015379.1.path1;transcripts=FBgn0015379.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160806026	160806642	.	+	.	ID=FBgn0015379.1.mrna1;geneID=FBgn0015379.1.path1;Name=FBgn0015379.1;Dir=sensecoverage=100.0;identity=99.8;matches=488;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013121
Chr1	stalkie_big_nohaplotig	exon	160806026	160806089	100	+	.	Parent=FBgn0015379.1.mrna1;Target=FBgn0015379.1 1 64 +
Chr1	stalkie_big_nohaplotig	exon	160806159	160806476	100	+	.	Parent=FBgn0015379.1.mrna1;Target=FBgn0015379.1 65 382 +
Chr1	stalkie_big_nohaplotig	exon	160806536	160806642	99	+	.	Parent=FBgn0015379.1.mrna1;Target=FBgn0015379.1 383 489 +
Chr1	stalkie_big_nohaplotig	CDS	160806026	160806089	.	+	0	Parent=FBgn0015379.1.mrna1;Target=FBgn0015379.1 1 64 +
Chr1	stalkie_big_nohaplotig	CDS	160806159	160806476	.	+	2	Parent=FBgn0015379.1.mrna1;Target=FBgn0015379.1 65 382 +
Chr1	stalkie_big_nohaplotig	CDS	160806536	160806642	.	+	2	Parent=FBgn0015379.1.mrna1;Target=FBgn0015379.1 383 489 +
Chr1	gffcl	locus	160807308	160809199	.	-	.	ID=RLOC_00013122;geneIDs=FBgn0015527.1.path1;transcripts=FBgn0015527.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160807308	160809199	.	-	.	ID=FBgn0015527.1.mrna1;geneID=FBgn0015527.1.path1;Name=FBgn0015527.1;Dir=sensecoverage=100.0;identity=98.9;matches=1640;mismatches=17;indels=2;unknowns=0;Target=FBgn0015527.1 3 89 +;locus=RLOC_00013122
Chr1	stalkie_big_nohaplotig	exon	160807308	160807488	98	-	.	Parent=FBgn0015527.1.mrna1;Target=FBgn0015527.1 1478 1659 +
Chr1	stalkie_big_nohaplotig	exon	160807555	160807957	99	-	.	Parent=FBgn0015527.1.mrna1;Target=FBgn0015527.1 1075 1477 +
Chr1	stalkie_big_nohaplotig	exon	160808009	160808548	99	-	.	Parent=FBgn0015527.1.mrna1;Target=FBgn0015527.1 535 1074 +
Chr1	stalkie_big_nohaplotig	exon	160808602	160808761	97	-	.	Parent=FBgn0015527.1.mrna1;Target=FBgn0015527.1 375 534 +
Chr1	stalkie_big_nohaplotig	exon	160808827	160809199	98	-	.	Parent=FBgn0015527.1.mrna1;Target=FBgn0015527.1 1 374 +
Chr1	stalkie_big_nohaplotig	CDS	160809112	160809197	.	-	0	Parent=FBgn0015527.1.mrna1
Chr1	gffcl	locus	160809998	160812368	.	+	.	ID=RLOC_00013123;geneIDs=FBgn0030854.1.path1;transcripts=FBgn0030854.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160809998	160812368	.	+	.	ID=FBgn0030854.1.mrna1;geneID=FBgn0030854.1.path1;Name=FBgn0030854.1;Dir=sensecoverage=100.0;identity=99.6;matches=1091;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013123
Chr1	stalkie_big_nohaplotig	exon	160809998	160810480	99	+	.	Parent=FBgn0030854.1.mrna1;Target=FBgn0030854.1 1 483 +
Chr1	stalkie_big_nohaplotig	exon	160810544	160810687	99	+	.	Parent=FBgn0030854.1.mrna1;Target=FBgn0030854.1 484 627 +
Chr1	stalkie_big_nohaplotig	exon	160811845	160812287	99	+	.	Parent=FBgn0030854.1.mrna1;Target=FBgn0030854.1 628 1070 +
Chr1	stalkie_big_nohaplotig	exon	160812344	160812368	100	+	.	Parent=FBgn0030854.1.mrna1;Target=FBgn0030854.1 1071 1095 +
Chr1	stalkie_big_nohaplotig	CDS	160809998	160810480	.	+	0	Parent=FBgn0030854.1.mrna1;Target=FBgn0030854.1 1 483 +
Chr1	stalkie_big_nohaplotig	CDS	160810544	160810687	.	+	0	Parent=FBgn0030854.1.mrna1;Target=FBgn0030854.1 484 627 +
Chr1	stalkie_big_nohaplotig	CDS	160811845	160812287	.	+	0	Parent=FBgn0030854.1.mrna1;Target=FBgn0030854.1 628 1070 +
Chr1	stalkie_big_nohaplotig	CDS	160812344	160812368	.	+	1	Parent=FBgn0030854.1.mrna1;Target=FBgn0030854.1 1071 1095 +
Chr1	gffcl	locus	160812627	160914281	.	-	.	ID=RLOC_00013124;geneIDs=FBgn0030853.1.path1,comp135006_c1_seq1.path1;transcripts=FBgn0030853.1.mrna1,comp135006_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160812627	160814915	.	-	.	ID=FBgn0030853.1.mrna1;geneID=FBgn0030853.1.path1;Name=FBgn0030853.1;Dir=sensecoverage=100.0;identity=99.7;matches=754;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013124
Chr1	stalkie_big_nohaplotig	exon	160812627	160812794	99	-	.	Parent=FBgn0030853.1.mrna1;Target=FBgn0030853.1 589 756 +
Chr1	stalkie_big_nohaplotig	exon	160812851	160812970	100	-	.	Parent=FBgn0030853.1.mrna1;Target=FBgn0030853.1 469 588 +
Chr1	stalkie_big_nohaplotig	exon	160814279	160814554	100	-	.	Parent=FBgn0030853.1.mrna1;Target=FBgn0030853.1 193 468 +
Chr1	stalkie_big_nohaplotig	exon	160814606	160814728	100	-	.	Parent=FBgn0030853.1.mrna1;Target=FBgn0030853.1 70 192 +
Chr1	stalkie_big_nohaplotig	exon	160814847	160814915	98	-	.	Parent=FBgn0030853.1.mrna1;Target=FBgn0030853.1 1 69 +
Chr1	stalkie_big_nohaplotig	CDS	160812627	160812794	.	-	0	Parent=FBgn0030853.1.mrna1;Target=FBgn0030853.1 589 756 +
Chr1	stalkie_big_nohaplotig	CDS	160812851	160812970	.	-	0	Parent=FBgn0030853.1.mrna1;Target=FBgn0030853.1 469 588 +
Chr1	stalkie_big_nohaplotig	CDS	160814279	160814554	.	-	0	Parent=FBgn0030853.1.mrna1;Target=FBgn0030853.1 193 468 +
Chr1	stalkie_big_nohaplotig	CDS	160814606	160814728	.	-	0	Parent=FBgn0030853.1.mrna1;Target=FBgn0030853.1 70 192 +
Chr1	stalkie_big_nohaplotig	CDS	160814847	160814915	.	-	0	Parent=FBgn0030853.1.mrna1;Target=FBgn0030853.1 1 69 +
Chr1	stalkie_big_nohaplotig	mRNA	160814527	160914281	.	-	.	ID=comp135006_c1_seq1.mrna1;geneID=comp135006_c1_seq1.path1;Name=comp135006_c1_seq1;Dir=antisensecoverage=71.3;identity=88.0;matches=954;mismatches=59;indels=71;unknowns=0;locus=RLOC_00013124
Chr1	stalkie_big_nohaplotig	exon	160814527	160814554	85	-	.	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 493 518 -
Chr1	stalkie_big_nohaplotig	exon	160815025	160815028	75	-	.	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 519 522 -
Chr1	stalkie_big_nohaplotig	exon	160816313	160816320	100	-	.	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 523 530 -
Chr1	stalkie_big_nohaplotig	exon	160816323	160816330	100	-	.	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 585 592 -
Chr1	stalkie_big_nohaplotig	exon	160821313	160821365	56	-	.	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 593 656 -
Chr1	stalkie_big_nohaplotig	exon	160823480	160823517	51	-	.	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 688 726 -
Chr1	stalkie_big_nohaplotig	exon	160829411	160829420	100	-	.	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 727 736 -
Chr1	stalkie_big_nohaplotig	exon	160834251	160834260	100	-	.	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 752 761 -
Chr1	stalkie_big_nohaplotig	exon	160836045	160836047	100	-	.	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 762 764 -
Chr1	stalkie_big_nohaplotig	exon	160841704	160841706	66	-	.	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 765 767 -
Chr1	stalkie_big_nohaplotig	exon	160844520	160844527	100	-	.	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 768 775 -
Chr1	stalkie_big_nohaplotig	exon	160856470	160856476	100	-	.	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 776 782 -
Chr1	stalkie_big_nohaplotig	exon	160858867	160858878	83	-	.	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 783 794 -
Chr1	stalkie_big_nohaplotig	exon	160861191	160861202	41	-	.	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 795 801 -
Chr1	stalkie_big_nohaplotig	exon	160865676	160865683	100	-	.	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 802 809 -
Chr1	stalkie_big_nohaplotig	exon	160869303	160869307	100	-	.	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 844 848 -
Chr1	stalkie_big_nohaplotig	exon	160872925	160872931	100	-	.	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 849 855 -
Chr1	stalkie_big_nohaplotig	exon	160877480	160877481	100	-	.	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 856 857 -
Chr1	stalkie_big_nohaplotig	exon	160900461	160900466	100	-	.	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 858 863 -
Chr1	stalkie_big_nohaplotig	exon	160906344	160906348	100	-	.	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 864 868 -
Chr1	stalkie_big_nohaplotig	exon	160913238	160913833	92	-	.	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 869 1487 -
Chr1	stalkie_big_nohaplotig	exon	160914078	160914281	92	-	.	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 1520 1714 -
Chr1	stalkie_big_nohaplotig	CDS	160861194	160861202	.	-	2	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 798 801 .
Chr1	stalkie_big_nohaplotig	CDS	160865676	160865683	.	-	1	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 802 809 .
Chr1	stalkie_big_nohaplotig	CDS	160869303	160869307	.	-	0	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 844 848 .
Chr1	stalkie_big_nohaplotig	CDS	160872925	160872931	.	-	1	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 849 855 .
Chr1	stalkie_big_nohaplotig	CDS	160877480	160877481	.	-	0	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 856 857 .
Chr1	stalkie_big_nohaplotig	CDS	160900461	160900466	.	-	0	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 858 863 .
Chr1	stalkie_big_nohaplotig	CDS	160906344	160906348	.	-	2	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 864 868 .
Chr1	stalkie_big_nohaplotig	CDS	160913238	160913259	.	-	0	Parent=comp135006_c1_seq1.mrna1;Target=comp135006_c1_seq1 869 890 .
Chr1	gffcl	locus	160821823	160822204	.	-	.	ID=RLOC_00013125;geneIDs=comp1497687_c0_seq1.path1;transcripts=comp1497687_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160821823	160822204	.	-	.	ID=comp1497687_c0_seq1.mrna1;geneID=comp1497687_c0_seq1.path1;Name=comp1497687_c0_seq1;Dir=indeterminatecoverage=97.9;identity=99.5;matches=380;mismatches=2;indels=0;unknowns=0;Target=comp1497687_c0_seq1 383 2 .;CDS_Target=comp1497687_c0_seq1 159 4 .;locus=RLOC_00013125
Chr1	stalkie_big_nohaplotig	exon	160821823	160822204	99	-	.	Parent=comp1497687_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160822047	160822202	.	-	0	Parent=comp1497687_c0_seq1.mrna1
Chr1	gffcl	locus	160824419	160826261	.	+	.	ID=RLOC_00013126;geneIDs=FBgn0029681.1.path1;transcripts=FBgn0029681.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160824419	160826261	.	+	.	ID=FBgn0029681.1.mrna1;geneID=FBgn0029681.1.path1;Name=FBgn0029681.1;Dir=sensecoverage=98.9;identity=99.8;matches=1385;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013126
Chr1	stalkie_big_nohaplotig	exon	160824419	160825027	100	+	.	Parent=FBgn0029681.1.mrna1;Target=FBgn0029681.1 17 625 +
Chr1	stalkie_big_nohaplotig	exon	160825101	160825367	99	+	.	Parent=FBgn0029681.1.mrna1;Target=FBgn0029681.1 626 892 +
Chr1	stalkie_big_nohaplotig	exon	160825688	160825841	100	+	.	Parent=FBgn0029681.1.mrna1;Target=FBgn0029681.1 893 1046 +
Chr1	stalkie_big_nohaplotig	exon	160825904	160826261	99	+	.	Parent=FBgn0029681.1.mrna1;Target=FBgn0029681.1 1047 1404 +
Chr1	stalkie_big_nohaplotig	CDS	160824421	160825027	.	+	0	Parent=FBgn0029681.1.mrna1;Target=FBgn0029681.1 19 625 +
Chr1	stalkie_big_nohaplotig	CDS	160825101	160825367	.	+	2	Parent=FBgn0029681.1.mrna1;Target=FBgn0029681.1 626 892 +
Chr1	stalkie_big_nohaplotig	CDS	160825688	160825841	.	+	2	Parent=FBgn0029681.1.mrna1;Target=FBgn0029681.1 893 1046 +
Chr1	stalkie_big_nohaplotig	CDS	160825904	160826261	.	+	1	Parent=FBgn0029681.1.mrna1;Target=FBgn0029681.1 1047 1404 +
Chr1	gffcl	locus	160830300	160874842	.	+	.	ID=RLOC_00013127;geneIDs=comp147469_c2_seq1.path1;transcripts=comp147469_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160830300	160874842	.	+	.	ID=comp147469_c2_seq1.mrna1;geneID=comp147469_c2_seq1.path1;Name=comp147469_c2_seq1;Dir=antisensecoverage=99.9;identity=99.4;matches=844;mismatches=5;indels=0;unknowns=0;locus=RLOC_00013127
Chr1	stalkie_big_nohaplotig	exon	160830300	160830728	99	+	.	Parent=comp147469_c2_seq1.mrna1;Target=comp147469_c2_seq1 421 849 -
Chr1	stalkie_big_nohaplotig	exon	160863011	160863144	100	+	.	Parent=comp147469_c2_seq1.mrna1;Target=comp147469_c2_seq1 287 420 -
Chr1	stalkie_big_nohaplotig	exon	160874557	160874842	99	+	.	Parent=comp147469_c2_seq1.mrna1;Target=comp147469_c2_seq1 1 286 -
Chr1	stalkie_big_nohaplotig	CDS	160863013	160863144	.	+	0	Parent=comp147469_c2_seq1.mrna1;Target=comp147469_c2_seq1 287 418 .
Chr1	stalkie_big_nohaplotig	CDS	160874557	160874649	.	+	0	Parent=comp147469_c2_seq1.mrna1;Target=comp147469_c2_seq1 194 286 .
Chr1	gffcl	locus	160859719	160860289	.	-	.	ID=RLOC_00013128;geneIDs=comp134384_c0_seq1.path1;transcripts=comp134384_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160859719	160860289	.	-	.	ID=comp134384_c0_seq1.mrna1;geneID=comp134384_c0_seq1.path1;Name=comp134384_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.1;matches=566;mismatches=5;indels=0;unknowns=0;Target=comp134384_c0_seq1 572 2 .;CDS_Target=comp134384_c0_seq1 98 3 .;locus=RLOC_00013128
Chr1	stalkie_big_nohaplotig	exon	160859719	160860289	99	-	.	Parent=comp134384_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160860193	160860288	.	-	0	Parent=comp134384_c0_seq1.mrna1
Chr1	gffcl	locus	160897065	160897322	.	+	.	ID=RLOC_00013129;geneIDs=comp118989_c0_seq1.path1;transcripts=comp118989_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160897065	160897322	.	+	.	ID=comp118989_c0_seq1.mrna1;geneID=comp118989_c0_seq1.path1;Name=comp118989_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=255;mismatches=3;indels=0;unknowns=0;Target=comp118989_c0_seq1 258 1 .;CDS_Target=comp118989_c0_seq1 202 86 .;locus=RLOC_00013129
Chr1	stalkie_big_nohaplotig	exon	160897065	160897322	98	+	.	Parent=comp118989_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160897150	160897266	.	+	0	Parent=comp118989_c0_seq1.mrna1
Chr1	gffcl	locus	160897418	160898783	.	-	.	ID=RLOC_00013130;geneIDs=comp141545_c0_seq1.path1,comp161590_c0_seq1.path1;transcripts=comp161590_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160897418	160898381	.	-	.	ID=comp161590_c0_seq1.mrna1;geneID=comp161590_c0_seq1.path1;Name=comp161590_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=943;mismatches=21;indels=0;unknowns=0;Target=comp161590_c0_seq1 964 1 .;CDS_Target=comp161590_c0_seq1 323 228 .;locus=RLOC_00013130
Chr1	stalkie_big_nohaplotig	exon	160897418	160898381	97	-	.	Parent=comp161590_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160898059	160898154	.	-	0	Parent=comp161590_c0_seq1.mrna1
Chr1	gffcl	locus	160929255	160932383	.	+	.	ID=RLOC_00013131;geneIDs=FBgn0033860.1.path1,comp141254_c0_seq1.path1;transcripts=FBgn0033860.1.mrna1,comp141254_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160929255	160932383	.	+	.	ID=FBgn0033860.1.mrna1;geneID=FBgn0033860.1.path1;Name=FBgn0033860.1;Dir=sensecoverage=100.0;identity=99.6;matches=1598;mismatches=7;indels=0;unknowns=0;locus=RLOC_00013131
Chr1	stalkie_big_nohaplotig	exon	160929255	160929395	100	+	.	Parent=FBgn0033860.1.mrna1;Target=FBgn0033860.1 1 141 +
Chr1	stalkie_big_nohaplotig	exon	160929459	160929574	100	+	.	Parent=FBgn0033860.1.mrna1;Target=FBgn0033860.1 142 257 +
Chr1	stalkie_big_nohaplotig	exon	160929630	160929765	99	+	.	Parent=FBgn0033860.1.mrna1;Target=FBgn0033860.1 258 393 +
Chr1	stalkie_big_nohaplotig	exon	160930934	160931439	99	+	.	Parent=FBgn0033860.1.mrna1;Target=FBgn0033860.1 394 899 +
Chr1	stalkie_big_nohaplotig	exon	160931499	160931718	99	+	.	Parent=FBgn0033860.1.mrna1;Target=FBgn0033860.1 900 1119 +
Chr1	stalkie_big_nohaplotig	exon	160931785	160932034	99	+	.	Parent=FBgn0033860.1.mrna1;Target=FBgn0033860.1 1120 1369 +
Chr1	stalkie_big_nohaplotig	exon	160932095	160932168	100	+	.	Parent=FBgn0033860.1.mrna1;Target=FBgn0033860.1 1370 1443 +
Chr1	stalkie_big_nohaplotig	exon	160932222	160932383	99	+	.	Parent=FBgn0033860.1.mrna1;Target=FBgn0033860.1 1444 1605 +
Chr1	stalkie_big_nohaplotig	CDS	160929255	160929395	.	+	0	Parent=FBgn0033860.1.mrna1;Target=FBgn0033860.1 1 141 +
Chr1	stalkie_big_nohaplotig	CDS	160929459	160929574	.	+	0	Parent=FBgn0033860.1.mrna1;Target=FBgn0033860.1 142 257 +
Chr1	stalkie_big_nohaplotig	CDS	160929630	160929765	.	+	1	Parent=FBgn0033860.1.mrna1;Target=FBgn0033860.1 258 393 +
Chr1	stalkie_big_nohaplotig	CDS	160930934	160931439	.	+	0	Parent=FBgn0033860.1.mrna1;Target=FBgn0033860.1 394 899 +
Chr1	stalkie_big_nohaplotig	CDS	160931499	160931718	.	+	1	Parent=FBgn0033860.1.mrna1;Target=FBgn0033860.1 900 1119 +
Chr1	stalkie_big_nohaplotig	CDS	160931785	160932034	.	+	0	Parent=FBgn0033860.1.mrna1;Target=FBgn0033860.1 1120 1369 +
Chr1	stalkie_big_nohaplotig	CDS	160932095	160932168	.	+	2	Parent=FBgn0033860.1.mrna1;Target=FBgn0033860.1 1370 1443 +
Chr1	stalkie_big_nohaplotig	CDS	160932222	160932383	.	+	0	Parent=FBgn0033860.1.mrna1;Target=FBgn0033860.1 1444 1605 +
Chr1	stalkie_big_nohaplotig	mRNA	160929743	160930127	.	+	.	ID=comp141254_c0_seq1.mrna1;geneID=comp141254_c0_seq1.path1;Name=comp141254_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=381;mismatches=4;indels=0;unknowns=0;Target=comp141254_c0_seq1 385 1 .;CDS_Target=comp141254_c0_seq1 91 2 .;locus=RLOC_00013131
Chr1	stalkie_big_nohaplotig	exon	160929743	160930127	98	+	.	Parent=comp141254_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	160929744	160929833	.	+	0	Parent=comp141254_c0_seq1.mrna1
Chr1	gffcl	locus	160964051	160967099	.	-	.	ID=RLOC_00013132;geneIDs=FBgn0029685.1.path1;transcripts=FBgn0029685.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160964051	160967099	.	-	.	ID=FBgn0029685.1.mrna1;geneID=FBgn0029685.1.path1;Name=FBgn0029685.1;Dir=sensecoverage=100.0;identity=99.4;matches=2243;mismatches=13;indels=0;unknowns=0;locus=RLOC_00013132
Chr1	stalkie_big_nohaplotig	exon	160964051	160965491	99	-	.	Parent=FBgn0029685.1.mrna1;Target=FBgn0029685.1 816 2256 +
Chr1	stalkie_big_nohaplotig	exon	160965552	160966310	99	-	.	Parent=FBgn0029685.1.mrna1;Target=FBgn0029685.1 57 815 +
Chr1	stalkie_big_nohaplotig	exon	160967044	160967099	98	-	.	Parent=FBgn0029685.1.mrna1;Target=FBgn0029685.1 1 56 +
Chr1	stalkie_big_nohaplotig	CDS	160964051	160965491	.	-	1	Parent=FBgn0029685.1.mrna1;Target=FBgn0029685.1 816 2256 +
Chr1	stalkie_big_nohaplotig	CDS	160965552	160966310	.	-	1	Parent=FBgn0029685.1.mrna1;Target=FBgn0029685.1 57 815 +
Chr1	stalkie_big_nohaplotig	CDS	160967044	160967099	.	-	0	Parent=FBgn0029685.1.mrna1;Target=FBgn0029685.1 1 56 +
Chr1	gffcl	locus	160969442	160976685	.	+	.	ID=RLOC_00013133;geneIDs=FBgn0029687.1.path1;transcripts=FBgn0029687.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160969442	160976685	.	+	.	ID=FBgn0029687.1.mrna1;geneID=FBgn0029687.1.path1;Name=FBgn0029687.1;Dir=sensecoverage=100.0;identity=100.0;matches=744;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013133
Chr1	stalkie_big_nohaplotig	exon	160969442	160969505	100	+	.	Parent=FBgn0029687.1.mrna1;Target=FBgn0029687.1 1 64 +
Chr1	stalkie_big_nohaplotig	exon	160974952	160975104	100	+	.	Parent=FBgn0029687.1.mrna1;Target=FBgn0029687.1 65 217 +
Chr1	stalkie_big_nohaplotig	exon	160975173	160975276	100	+	.	Parent=FBgn0029687.1.mrna1;Target=FBgn0029687.1 218 321 +
Chr1	stalkie_big_nohaplotig	exon	160975342	160975438	100	+	.	Parent=FBgn0029687.1.mrna1;Target=FBgn0029687.1 322 418 +
Chr1	stalkie_big_nohaplotig	exon	160975509	160975567	100	+	.	Parent=FBgn0029687.1.mrna1;Target=FBgn0029687.1 419 477 +
Chr1	stalkie_big_nohaplotig	exon	160975643	160975750	100	+	.	Parent=FBgn0029687.1.mrna1;Target=FBgn0029687.1 478 585 +
Chr1	stalkie_big_nohaplotig	exon	160976527	160976685	100	+	.	Parent=FBgn0029687.1.mrna1;Target=FBgn0029687.1 586 744 +
Chr1	stalkie_big_nohaplotig	CDS	160969442	160969505	.	+	0	Parent=FBgn0029687.1.mrna1;Target=FBgn0029687.1 1 64 +
Chr1	stalkie_big_nohaplotig	CDS	160974952	160975104	.	+	2	Parent=FBgn0029687.1.mrna1;Target=FBgn0029687.1 65 217 +
Chr1	stalkie_big_nohaplotig	CDS	160975173	160975276	.	+	2	Parent=FBgn0029687.1.mrna1;Target=FBgn0029687.1 218 321 +
Chr1	stalkie_big_nohaplotig	CDS	160975342	160975438	.	+	0	Parent=FBgn0029687.1.mrna1;Target=FBgn0029687.1 322 418 +
Chr1	stalkie_big_nohaplotig	CDS	160975509	160975567	.	+	2	Parent=FBgn0029687.1.mrna1;Target=FBgn0029687.1 419 477 +
Chr1	stalkie_big_nohaplotig	CDS	160975643	160975750	.	+	0	Parent=FBgn0029687.1.mrna1;Target=FBgn0029687.1 478 585 +
Chr1	stalkie_big_nohaplotig	CDS	160976527	160976685	.	+	0	Parent=FBgn0029687.1.mrna1;Target=FBgn0029687.1 586 744 +
Chr1	gffcl	locus	160974152	160977957	.	+	.	ID=RLOC_00013134;geneIDs=comp148239_c0_seq1.path1;transcripts=comp148239_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160974152	160977957	.	+	.	ID=comp148239_c0_seq1.mrna1;geneID=comp148239_c0_seq1.path1;Name=comp148239_c0_seq1;Dir=indeterminatecoverage=96.2;identity=99.1;matches=977;mismatches=4;indels=5;unknowns=0;Target=comp148239_c0_seq1 217 83 .;locus=RLOC_00013134
Chr1	stalkie_big_nohaplotig	exon	160974152	160974158	100	+	.	Parent=comp148239_c0_seq1.mrna1;Target=comp148239_c0_seq1 46 40 .
Chr1	stalkie_big_nohaplotig	exon	160976984	160977957	99	+	.	Parent=comp148239_c0_seq1.mrna1;Target=comp148239_c0_seq1 1025 47 .
Chr1	stalkie_big_nohaplotig	CDS	160977020	160977152	.	+	0	Parent=comp148239_c0_seq1.mrna1
Chr1	gffcl	locus	160980442	160987516	.	+	.	ID=RLOC_00013135;geneIDs=FBgn0052495.1.path1;transcripts=FBgn0052495.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160980442	160987516	.	+	.	ID=FBgn0052495.1.mrna1;geneID=FBgn0052495.1.path1;Name=FBgn0052495.1;Dir=sensecoverage=100.0;identity=99.7;matches=1552;mismatches=5;indels=0;unknowns=0;locus=RLOC_00013135
Chr1	stalkie_big_nohaplotig	exon	160980442	160980708	99	+	.	Parent=FBgn0052495.1.mrna1;Target=FBgn0052495.1 1 267 +
Chr1	stalkie_big_nohaplotig	exon	160980778	160980990	100	+	.	Parent=FBgn0052495.1.mrna1;Target=FBgn0052495.1 268 480 +
Chr1	stalkie_big_nohaplotig	exon	160983328	160983461	100	+	.	Parent=FBgn0052495.1.mrna1;Target=FBgn0052495.1 481 614 +
Chr1	stalkie_big_nohaplotig	exon	160983798	160983840	100	+	.	Parent=FBgn0052495.1.mrna1;Target=FBgn0052495.1 615 657 +
Chr1	stalkie_big_nohaplotig	exon	160983902	160984027	99	+	.	Parent=FBgn0052495.1.mrna1;Target=FBgn0052495.1 658 783 +
Chr1	stalkie_big_nohaplotig	exon	160986557	160986669	98	+	.	Parent=FBgn0052495.1.mrna1;Target=FBgn0052495.1 784 896 +
Chr1	stalkie_big_nohaplotig	exon	160986732	160986945	100	+	.	Parent=FBgn0052495.1.mrna1;Target=FBgn0052495.1 897 1110 +
Chr1	stalkie_big_nohaplotig	exon	160987010	160987180	99	+	.	Parent=FBgn0052495.1.mrna1;Target=FBgn0052495.1 1111 1281 +
Chr1	stalkie_big_nohaplotig	exon	160987241	160987516	100	+	.	Parent=FBgn0052495.1.mrna1;Target=FBgn0052495.1 1282 1557 +
Chr1	stalkie_big_nohaplotig	CDS	160980442	160980708	.	+	0	Parent=FBgn0052495.1.mrna1;Target=FBgn0052495.1 1 267 +
Chr1	stalkie_big_nohaplotig	CDS	160980778	160980990	.	+	0	Parent=FBgn0052495.1.mrna1;Target=FBgn0052495.1 268 480 +
Chr1	stalkie_big_nohaplotig	CDS	160983328	160983461	.	+	0	Parent=FBgn0052495.1.mrna1;Target=FBgn0052495.1 481 614 +
Chr1	stalkie_big_nohaplotig	CDS	160983798	160983840	.	+	1	Parent=FBgn0052495.1.mrna1;Target=FBgn0052495.1 615 657 +
Chr1	stalkie_big_nohaplotig	CDS	160983902	160984027	.	+	0	Parent=FBgn0052495.1.mrna1;Target=FBgn0052495.1 658 783 +
Chr1	stalkie_big_nohaplotig	CDS	160986557	160986669	.	+	0	Parent=FBgn0052495.1.mrna1;Target=FBgn0052495.1 784 896 +
Chr1	stalkie_big_nohaplotig	CDS	160986732	160986945	.	+	1	Parent=FBgn0052495.1.mrna1;Target=FBgn0052495.1 897 1110 +
Chr1	stalkie_big_nohaplotig	CDS	160987010	160987180	.	+	0	Parent=FBgn0052495.1.mrna1;Target=FBgn0052495.1 1111 1281 +
Chr1	stalkie_big_nohaplotig	CDS	160987241	160987516	.	+	0	Parent=FBgn0052495.1.mrna1;Target=FBgn0052495.1 1282 1557 +
Chr1	gffcl	locus	160988250	160991457	.	-	.	ID=RLOC_00013136;geneIDs=FBgn0033868.2.path1,comp739516_c0_seq1.path1;transcripts=FBgn0033868.2.mrna1,comp739516_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160988250	160991457	.	-	.	ID=FBgn0033868.2.mrna1;geneID=FBgn0033868.2.path1;Name=FBgn0033868.2;Dir=sensecoverage=100.0;identity=99.9;matches=1619;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013136
Chr1	stalkie_big_nohaplotig	exon	160988250	160988411	99	-	.	Parent=FBgn0033868.2.mrna1;Target=FBgn0033868.2 1459 1620 +
Chr1	stalkie_big_nohaplotig	exon	160988467	160988540	100	-	.	Parent=FBgn0033868.2.mrna1;Target=FBgn0033868.2 1385 1458 +
Chr1	stalkie_big_nohaplotig	exon	160988603	160988852	100	-	.	Parent=FBgn0033868.2.mrna1;Target=FBgn0033868.2 1135 1384 +
Chr1	stalkie_big_nohaplotig	exon	160988933	160989152	100	-	.	Parent=FBgn0033868.2.mrna1;Target=FBgn0033868.2 915 1134 +
Chr1	stalkie_big_nohaplotig	exon	160989218	160989723	100	-	.	Parent=FBgn0033868.2.mrna1;Target=FBgn0033868.2 409 914 +
Chr1	stalkie_big_nohaplotig	exon	160990703	160990838	100	-	.	Parent=FBgn0033868.2.mrna1;Target=FBgn0033868.2 273 408 +
Chr1	stalkie_big_nohaplotig	exon	160990894	160991009	100	-	.	Parent=FBgn0033868.2.mrna1;Target=FBgn0033868.2 157 272 +
Chr1	stalkie_big_nohaplotig	exon	160991302	160991457	100	-	.	Parent=FBgn0033868.2.mrna1;Target=FBgn0033868.2 1 156 +
Chr1	stalkie_big_nohaplotig	CDS	160988250	160988411	.	-	0	Parent=FBgn0033868.2.mrna1;Target=FBgn0033868.2 1459 1620 +
Chr1	stalkie_big_nohaplotig	CDS	160988467	160988540	.	-	2	Parent=FBgn0033868.2.mrna1;Target=FBgn0033868.2 1385 1458 +
Chr1	stalkie_big_nohaplotig	CDS	160988603	160988852	.	-	0	Parent=FBgn0033868.2.mrna1;Target=FBgn0033868.2 1135 1384 +
Chr1	stalkie_big_nohaplotig	CDS	160988933	160989152	.	-	1	Parent=FBgn0033868.2.mrna1;Target=FBgn0033868.2 915 1134 +
Chr1	stalkie_big_nohaplotig	CDS	160989218	160989723	.	-	0	Parent=FBgn0033868.2.mrna1;Target=FBgn0033868.2 409 914 +
Chr1	stalkie_big_nohaplotig	CDS	160990703	160990838	.	-	1	Parent=FBgn0033868.2.mrna1;Target=FBgn0033868.2 273 408 +
Chr1	stalkie_big_nohaplotig	CDS	160990894	160991009	.	-	0	Parent=FBgn0033868.2.mrna1;Target=FBgn0033868.2 157 272 +
Chr1	stalkie_big_nohaplotig	CDS	160991302	160991457	.	-	0	Parent=FBgn0033868.2.mrna1;Target=FBgn0033868.2 1 156 +
Chr1	stalkie_big_nohaplotig	mRNA	160989701	160990725	.	-	.	ID=comp739516_c0_seq1.mrna1;geneID=comp739516_c0_seq1.path1;Name=comp739516_c0_seq1;Dir=sensecoverage=100.0;identity=98.1;matches=259;mismatches=4;indels=1;unknowns=0;locus=RLOC_00013136
Chr1	stalkie_big_nohaplotig	exon	160989701	160989723	100	-	.	Parent=comp739516_c0_seq1.mrna1;Target=comp739516_c0_seq1 242 264 +
Chr1	stalkie_big_nohaplotig	exon	160989818	160990034	97	-	.	Parent=comp739516_c0_seq1.mrna1;Target=comp739516_c0_seq1 24 241 +
Chr1	stalkie_big_nohaplotig	exon	160990703	160990725	100	-	.	Parent=comp739516_c0_seq1.mrna1;Target=comp739516_c0_seq1 1 23 +
Chr1	stalkie_big_nohaplotig	CDS	160990011	160990034	.	-	1	Parent=comp739516_c0_seq1.mrna1;Target=comp739516_c0_seq1 24 48 +
Chr1	stalkie_big_nohaplotig	CDS	160990703	160990725	.	-	0	Parent=comp739516_c0_seq1.mrna1;Target=comp739516_c0_seq1 1 23 +
Chr1	gffcl	locus	160992129	160992717	.	-	.	ID=RLOC_00013137;geneIDs=FBgn0030883.1.path1;transcripts=FBgn0030883.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160992129	160992717	.	-	.	ID=FBgn0030883.1.mrna1;geneID=FBgn0030883.1.path1;Name=FBgn0030883.1;Dir=sensecoverage=100.0;identity=98.9;matches=463;mismatches=5;indels=0;unknowns=0;locus=RLOC_00013137
Chr1	stalkie_big_nohaplotig	exon	160992129	160992294	98	-	.	Parent=FBgn0030883.1.mrna1;Target=FBgn0030883.1 303 468 +
Chr1	stalkie_big_nohaplotig	exon	160992357	160992582	98	-	.	Parent=FBgn0030883.1.mrna1;Target=FBgn0030883.1 77 302 +
Chr1	stalkie_big_nohaplotig	exon	160992642	160992717	100	-	.	Parent=FBgn0030883.1.mrna1;Target=FBgn0030883.1 1 76 +
Chr1	stalkie_big_nohaplotig	CDS	160992129	160992294	.	-	1	Parent=FBgn0030883.1.mrna1;Target=FBgn0030883.1 303 468 +
Chr1	stalkie_big_nohaplotig	CDS	160992357	160992582	.	-	2	Parent=FBgn0030883.1.mrna1;Target=FBgn0030883.1 77 302 +
Chr1	stalkie_big_nohaplotig	CDS	160992642	160992717	.	-	0	Parent=FBgn0030883.1.mrna1;Target=FBgn0030883.1 1 76 +
Chr1	gffcl	locus	160993945	160995603	.	+	.	ID=RLOC_00013138;geneIDs=FBgn0027605.1.path1;transcripts=FBgn0027605.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160993945	160995603	.	+	.	ID=FBgn0027605.1.mrna1;geneID=FBgn0027605.1.path1;Name=FBgn0027605.1;Dir=sensecoverage=100.0;identity=99.7;matches=1092;mismatches=2;indels=1;unknowns=0;Target=FBgn0027605.1 3 35 +;locus=RLOC_00013138
Chr1	stalkie_big_nohaplotig	exon	160993945	160993990	97	+	.	Parent=FBgn0027605.1.mrna1;Target=FBgn0027605.1 1 47 +
Chr1	stalkie_big_nohaplotig	exon	160994218	160994937	99	+	.	Parent=FBgn0027605.1.mrna1;Target=FBgn0027605.1 48 767 +
Chr1	stalkie_big_nohaplotig	exon	160995001	160995085	100	+	.	Parent=FBgn0027605.1.mrna1;Target=FBgn0027605.1 768 852 +
Chr1	stalkie_big_nohaplotig	exon	160995291	160995434	100	+	.	Parent=FBgn0027605.1.mrna1;Target=FBgn0027605.1 853 996 +
Chr1	stalkie_big_nohaplotig	exon	160995505	160995603	100	+	.	Parent=FBgn0027605.1.mrna1;Target=FBgn0027605.1 997 1095 +
Chr1	stalkie_big_nohaplotig	CDS	160993947	160993978	.	+	0	Parent=FBgn0027605.1.mrna1
Chr1	gffcl	locus	160996413	160997451	.	-	.	ID=RLOC_00013139;geneIDs=FBgn0032251.1.path1;transcripts=FBgn0032251.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	160996413	160997451	.	-	.	ID=FBgn0032251.1.mrna1;geneID=FBgn0032251.1.path1;Name=FBgn0032251.1;Dir=sensecoverage=100.0;identity=99.5;matches=869;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013139
Chr1	stalkie_big_nohaplotig	exon	160996413	160996466	100	-	.	Parent=FBgn0032251.1.mrna1;Target=FBgn0032251.1 820 873 +
Chr1	stalkie_big_nohaplotig	exon	160996522	160997001	99	-	.	Parent=FBgn0032251.1.mrna1;Target=FBgn0032251.1 340 819 +
Chr1	stalkie_big_nohaplotig	exon	160997061	160997284	99	-	.	Parent=FBgn0032251.1.mrna1;Target=FBgn0032251.1 116 339 +
Chr1	stalkie_big_nohaplotig	exon	160997337	160997451	98	-	.	Parent=FBgn0032251.1.mrna1;Target=FBgn0032251.1 1 115 +
Chr1	stalkie_big_nohaplotig	CDS	160996413	160996466	.	-	0	Parent=FBgn0032251.1.mrna1;Target=FBgn0032251.1 820 873 +
Chr1	stalkie_big_nohaplotig	CDS	160996522	160997001	.	-	0	Parent=FBgn0032251.1.mrna1;Target=FBgn0032251.1 340 819 +
Chr1	stalkie_big_nohaplotig	CDS	160997061	160997284	.	-	2	Parent=FBgn0032251.1.mrna1;Target=FBgn0032251.1 116 339 +
Chr1	stalkie_big_nohaplotig	CDS	160997337	160997451	.	-	0	Parent=FBgn0032251.1.mrna1;Target=FBgn0032251.1 1 115 +
Chr1	gffcl	locus	161018503	161027380	.	+	.	ID=RLOC_00013140;geneIDs=FBgn0030884.1.path1;transcripts=FBgn0030884.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161018503	161027380	.	+	.	ID=FBgn0030884.1.mrna1;geneID=FBgn0030884.1.path1;Name=FBgn0030884.1;Dir=sensecoverage=100.0;identity=99.0;matches=2782;mismatches=29;indels=0;unknowns=0;locus=RLOC_00013140
Chr1	stalkie_big_nohaplotig	exon	161018503	161018587	100	+	.	Parent=FBgn0030884.1.mrna1;Target=FBgn0030884.1 1 85 +
Chr1	stalkie_big_nohaplotig	exon	161024430	161024583	96	+	.	Parent=FBgn0030884.1.mrna1;Target=FBgn0030884.1 86 239 +
Chr1	stalkie_big_nohaplotig	exon	161024638	161025043	99	+	.	Parent=FBgn0030884.1.mrna1;Target=FBgn0030884.1 240 645 +
Chr1	stalkie_big_nohaplotig	exon	161025104	161025563	99	+	.	Parent=FBgn0030884.1.mrna1;Target=FBgn0030884.1 646 1105 +
Chr1	stalkie_big_nohaplotig	exon	161025616	161026015	100	+	.	Parent=FBgn0030884.1.mrna1;Target=FBgn0030884.1 1106 1505 +
Chr1	stalkie_big_nohaplotig	exon	161026075	161027380	98	+	.	Parent=FBgn0030884.1.mrna1;Target=FBgn0030884.1 1506 2811 +
Chr1	stalkie_big_nohaplotig	CDS	161018503	161018587	.	+	0	Parent=FBgn0030884.1.mrna1;Target=FBgn0030884.1 1 85 +
Chr1	stalkie_big_nohaplotig	CDS	161024430	161024583	.	+	2	Parent=FBgn0030884.1.mrna1;Target=FBgn0030884.1 86 239 +
Chr1	stalkie_big_nohaplotig	CDS	161024638	161025043	.	+	1	Parent=FBgn0030884.1.mrna1;Target=FBgn0030884.1 240 645 +
Chr1	stalkie_big_nohaplotig	CDS	161025104	161025563	.	+	0	Parent=FBgn0030884.1.mrna1;Target=FBgn0030884.1 646 1105 +
Chr1	stalkie_big_nohaplotig	CDS	161025616	161026015	.	+	2	Parent=FBgn0030884.1.mrna1;Target=FBgn0030884.1 1106 1505 +
Chr1	stalkie_big_nohaplotig	CDS	161026075	161027380	.	+	1	Parent=FBgn0030884.1.mrna1;Target=FBgn0030884.1 1506 2811 +
Chr1	gffcl	locus	161029927	161032790	.	+	.	ID=RLOC_00013141;geneIDs=comp159984_c0_seq1.path1,comp162076_c0_seq1.path1;transcripts=comp162076_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161029927	161031610	.	+	.	ID=comp162076_c0_seq1.mrna1;geneID=comp162076_c0_seq1.path1;Name=comp162076_c0_seq1;Dir=indeterminatecoverage=93.8;identity=98.1;matches=1656;mismatches=26;indels=6;unknowns=0;Target=comp162076_c0_seq1 1795 110 .;CDS_Target=comp162076_c0_seq1 1189 1058 .;locus=RLOC_00013141
Chr1	stalkie_big_nohaplotig	exon	161029927	161031610	98	+	.	Parent=comp162076_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161030871	161031002	.	+	0	Parent=comp162076_c0_seq1.mrna1
Chr1	gffcl	locus	161034273	161034793	.	+	.	ID=RLOC_00013142;geneIDs=comp130808_c0_seq1.path1;transcripts=comp130808_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161034273	161034793	.	+	.	ID=comp130808_c0_seq1.mrna1;geneID=comp130808_c0_seq1.path1;Name=comp130808_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=518;mismatches=3;indels=0;unknowns=0;Target=comp130808_c0_seq1 521 1 .;CDS_Target=comp130808_c0_seq1 100 2 .;locus=RLOC_00013142
Chr1	stalkie_big_nohaplotig	exon	161034273	161034793	99	+	.	Parent=comp130808_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161034274	161034372	.	+	0	Parent=comp130808_c0_seq1.mrna1
Chr1	gffcl	locus	161035480	161182556	.	.	.	ID=RLOC_00013143;geneIDs=FBgn0000479.1.path1,comp49639_c0_seq1.path1;transcripts=FBgn0000479.1.mrna1,comp49639_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161035480	161182556	.	-	.	ID=FBgn0000479.1.mrna1;geneID=FBgn0000479.1.path1;Name=FBgn0000479.1;Dir=sensecoverage=100.0;identity=99.7;matches=2678;mismatches=6;indels=1;unknowns=0;Target=FBgn0000479.1 3 71 +;locus=RLOC_00013143
Chr1	stalkie_big_nohaplotig	exon	161035480	161035614	100	-	.	Parent=FBgn0000479.1.mrna1;Target=FBgn0000479.1 2551 2685 +
Chr1	stalkie_big_nohaplotig	exon	161035765	161036133	99	-	.	Parent=FBgn0000479.1.mrna1;Target=FBgn0000479.1 2182 2550 +
Chr1	stalkie_big_nohaplotig	exon	161036751	161036913	100	-	.	Parent=FBgn0000479.1.mrna1;Target=FBgn0000479.1 2019 2181 +
Chr1	stalkie_big_nohaplotig	exon	161037227	161037341	100	-	.	Parent=FBgn0000479.1.mrna1;Target=FBgn0000479.1 1904 2018 +
Chr1	stalkie_big_nohaplotig	exon	161038031	161038295	100	-	.	Parent=FBgn0000479.1.mrna1;Target=FBgn0000479.1 1639 1903 +
Chr1	stalkie_big_nohaplotig	exon	161038365	161038675	99	-	.	Parent=FBgn0000479.1.mrna1;Target=FBgn0000479.1 1328 1638 +
Chr1	stalkie_big_nohaplotig	exon	161043092	161043185	98	-	.	Parent=FBgn0000479.1.mrna1;Target=FBgn0000479.1 1234 1327 +
Chr1	stalkie_big_nohaplotig	exon	161043313	161043496	100	-	.	Parent=FBgn0000479.1.mrna1;Target=FBgn0000479.1 1050 1233 +
Chr1	stalkie_big_nohaplotig	exon	161045871	161045975	100	-	.	Parent=FBgn0000479.1.mrna1;Target=FBgn0000479.1 945 1049 +
Chr1	stalkie_big_nohaplotig	exon	161059302	161059340	100	-	.	Parent=FBgn0000479.1.mrna1;Target=FBgn0000479.1 906 944 +
Chr1	stalkie_big_nohaplotig	exon	161065748	161065924	100	-	.	Parent=FBgn0000479.1.mrna1;Target=FBgn0000479.1 729 905 +
Chr1	stalkie_big_nohaplotig	exon	161181830	161182556	99	-	.	Parent=FBgn0000479.1.mrna1;Target=FBgn0000479.1 1 728 +
Chr1	stalkie_big_nohaplotig	CDS	161182487	161182554	.	-	0	Parent=FBgn0000479.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161043473	161043539	.	+	.	ID=comp49639_c0_seq1.mrna1;geneID=comp49639_c0_seq1.path1;Name=comp49639_c0_seq1;Dir=indeterminatecoverage=16.4;identity=100.0;matches=67;mismatches=0;indels=0;unknowns=0;Target=comp49639_c0_seq1 67 1 .;locus=RLOC_00013143
Chr1	stalkie_big_nohaplotig	exon	161043473	161043539	100	+	.	Parent=comp49639_c0_seq1.mrna1
Chr1	gffcl	locus	161050820	161051070	.	+	.	ID=RLOC_00013144;geneIDs=comp117036_c0_seq1.path1;transcripts=comp117036_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161050820	161051070	.	+	.	ID=comp117036_c0_seq1.mrna1;geneID=comp117036_c0_seq1.path1;Name=comp117036_c0_seq1;Dir=indeterminatecoverage=95.1;identity=99.2;matches=249;mismatches=2;indels=0;unknowns=0;Target=comp117036_c0_seq1 264 14 .;CDS_Target=comp117036_c0_seq1 105 40 .;locus=RLOC_00013144
Chr1	stalkie_big_nohaplotig	exon	161050820	161051070	99	+	.	Parent=comp117036_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161050846	161050911	.	+	0	Parent=comp117036_c0_seq1.mrna1
Chr1	gffcl	locus	161077840	161079195	.	+	.	ID=RLOC_00013145;geneIDs=FBgn0029656.1.path1;transcripts=FBgn0029656.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161077840	161079195	.	+	.	ID=FBgn0029656.1.mrna1;geneID=FBgn0029656.1.path1;Name=FBgn0029656.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1345;mismatches=11;indels=0;unknowns=0;Target=FBgn0029656.1 1356 1 .;locus=RLOC_00013145
Chr1	stalkie_big_nohaplotig	exon	161077840	161079195	99	+	.	Parent=FBgn0029656.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161077840	161079195	.	+	0	Parent=FBgn0029656.1.mrna1
Chr1	gffcl	locus	161202518	161204182	.	-	.	ID=RLOC_00013146;geneIDs=FBgn0038845.2.path1;transcripts=FBgn0038845.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161202518	161204182	.	-	.	ID=FBgn0038845.2.mrna1;geneID=FBgn0038845.2.path1;Name=FBgn0038845.2;Dir=sensecoverage=99.0;identity=98.6;matches=1576;mismatches=22;indels=0;unknowns=0;locus=RLOC_00013146
Chr1	stalkie_big_nohaplotig	exon	161202518	161202853	97	-	.	Parent=FBgn0038845.2.mrna1;Target=FBgn0038845.2 1279 1614 +
Chr1	stalkie_big_nohaplotig	exon	161202921	161204182	98	-	.	Parent=FBgn0038845.2.mrna1;Target=FBgn0038845.2 17 1278 +
Chr1	stalkie_big_nohaplotig	CDS	161202518	161202853	.	-	0	Parent=FBgn0038845.2.mrna1;Target=FBgn0038845.2 1279 1614 +
Chr1	stalkie_big_nohaplotig	CDS	161202921	161204180	.	-	0	Parent=FBgn0038845.2.mrna1;Target=FBgn0038845.2 19 1278 +
Chr1	gffcl	locus	161206795	161208560	.	+	.	ID=RLOC_00013147;geneIDs=FBgn0035619.2.path1;transcripts=FBgn0035619.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161206795	161208560	.	+	.	ID=FBgn0035619.2.mrna1;geneID=FBgn0035619.2.path1;Name=FBgn0035619.2;Dir=sensecoverage=100.0;identity=99.6;matches=1598;mismatches=7;indels=0;unknowns=0;locus=RLOC_00013147
Chr1	stalkie_big_nohaplotig	exon	161206795	161206897	99	+	.	Parent=FBgn0035619.2.mrna1;Target=FBgn0035619.2 1 103 +
Chr1	stalkie_big_nohaplotig	exon	161206996	161208149	99	+	.	Parent=FBgn0035619.2.mrna1;Target=FBgn0035619.2 104 1257 +
Chr1	stalkie_big_nohaplotig	exon	161208213	161208560	98	+	.	Parent=FBgn0035619.2.mrna1;Target=FBgn0035619.2 1258 1605 +
Chr1	stalkie_big_nohaplotig	CDS	161206795	161206897	.	+	0	Parent=FBgn0035619.2.mrna1;Target=FBgn0035619.2 1 103 +
Chr1	stalkie_big_nohaplotig	CDS	161206996	161208149	.	+	2	Parent=FBgn0035619.2.mrna1;Target=FBgn0035619.2 104 1257 +
Chr1	stalkie_big_nohaplotig	CDS	161208213	161208560	.	+	0	Parent=FBgn0035619.2.mrna1;Target=FBgn0035619.2 1258 1605 +
Chr1	gffcl	locus	161250446	161253345	.	+	.	ID=RLOC_00013148;geneIDs=comp148854_c1_seq1.path1;transcripts=comp148854_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161250446	161253345	.	+	.	ID=comp148854_c1_seq1.mrna1;geneID=comp148854_c1_seq1.path1;Name=comp148854_c1_seq1;Dir=antisensecoverage=100.0;identity=98.2;matches=443;mismatches=8;indels=0;unknowns=0;Target=comp148854_c1_seq1 296 451 .;locus=RLOC_00013148
Chr1	stalkie_big_nohaplotig	exon	161250446	161250836	97	+	.	Parent=comp148854_c1_seq1.mrna1;Target=comp148854_c1_seq1 61 451 -
Chr1	stalkie_big_nohaplotig	exon	161253286	161253345	100	+	.	Parent=comp148854_c1_seq1.mrna1;Target=comp148854_c1_seq1 1 60 -
Chr1	stalkie_big_nohaplotig	CDS	161250446	161250601	.	+	0	Parent=comp148854_c1_seq1.mrna1
Chr1	gffcl	locus	161271170	161378924	.	-	.	ID=RLOC_00013149;geneIDs=comp157182_c0_seq1.path1;transcripts=comp157182_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161271170	161378924	.	-	.	ID=comp157182_c0_seq1.mrna1;geneID=comp157182_c0_seq1.path1;Name=comp157182_c0_seq1;Dir=sensecoverage=98.8;identity=99.7;matches=1908;mismatches=5;indels=1;unknowns=0;Target=comp157182_c0_seq1 1826 1912 +;locus=RLOC_00013149
Chr1	stalkie_big_nohaplotig	exon	161271170	161272563	99	-	.	Parent=comp157182_c0_seq1.mrna1;Target=comp157182_c0_seq1 521 1914 +
Chr1	stalkie_big_nohaplotig	exon	161378406	161378924	99	-	.	Parent=comp157182_c0_seq1.mrna1;Target=comp157182_c0_seq1 1 520 +
Chr1	stalkie_big_nohaplotig	CDS	161271172	161271258	.	-	0	Parent=comp157182_c0_seq1.mrna1
Chr1	gffcl	locus	161273745	161274421	.	-	.	ID=RLOC_00013150;geneIDs=comp152662_c0_seq1.path1;transcripts=comp152662_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161273745	161274421	.	-	.	ID=comp152662_c0_seq1.mrna1;geneID=comp152662_c0_seq1.path1;Name=comp152662_c0_seq1;Dir=indeterminatecoverage=87.8;identity=97.1;matches=674;mismatches=3;indels=17;unknowns=0;Target=comp152662_c0_seq1 769 76 .;CDS_Target=comp152662_c0_seq1 437 240 .;locus=RLOC_00013150
Chr1	stalkie_big_nohaplotig	exon	161273745	161274421	97	-	.	Parent=comp152662_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161274077	161274274	.	-	0	Parent=comp152662_c0_seq1.mrna1
Chr1	gffcl	locus	161277985	161278576	.	-	.	ID=RLOC_00013151;geneIDs=comp66083_c0_seq1.path1;transcripts=comp66083_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161277985	161278576	.	-	.	ID=comp66083_c0_seq1.mrna1;geneID=comp66083_c0_seq1.path1;Name=comp66083_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.3;matches=588;mismatches=4;indels=0;unknowns=0;Target=comp66083_c0_seq1 593 2 .;CDS_Target=comp66083_c0_seq1 587 513 .;locus=RLOC_00013151
Chr1	stalkie_big_nohaplotig	exon	161277985	161278576	99	-	.	Parent=comp66083_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161277991	161278065	.	-	0	Parent=comp66083_c0_seq1.mrna1
Chr1	gffcl	locus	161279848	161280381	.	+	.	ID=RLOC_00013152;geneIDs=comp146513_c0_seq1.path1;transcripts=comp146513_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161279848	161280381	.	+	.	ID=comp146513_c0_seq1.mrna1;geneID=comp146513_c0_seq1.path1;Name=comp146513_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=524;mismatches=10;indels=0;unknowns=0;Target=comp146513_c0_seq1 534 1 .;CDS_Target=comp146513_c0_seq1 532 38 .;locus=RLOC_00013152
Chr1	stalkie_big_nohaplotig	exon	161279848	161280381	98	+	.	Parent=comp146513_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161279885	161280379	.	+	0	Parent=comp146513_c0_seq1.mrna1
Chr1	gffcl	locus	161310269	161310921	.	-	.	ID=RLOC_00013153;geneIDs=comp145277_c0_seq1.path1;transcripts=comp145277_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161310269	161310921	.	-	.	ID=comp145277_c0_seq1.mrna1;geneID=comp145277_c0_seq1.path1;Name=comp145277_c0_seq1;Dir=indeterminatecoverage=94.6;identity=99.8;matches=652;mismatches=1;indels=0;unknowns=0;Target=comp145277_c0_seq1 677 25 .;CDS_Target=comp145277_c0_seq1 467 84 .;locus=RLOC_00013153
Chr1	stalkie_big_nohaplotig	exon	161310269	161310921	99	-	.	Parent=comp145277_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161310479	161310862	.	-	0	Parent=comp145277_c0_seq1.mrna1
Chr1	gffcl	locus	161312998	161313298	.	-	.	ID=RLOC_00013154;geneIDs=comp143631_c0_seq1.path1;transcripts=comp143631_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161312998	161313298	.	-	.	ID=comp143631_c0_seq1.mrna1;geneID=comp143631_c0_seq1.path1;Name=comp143631_c0_seq1;Dir=indeterminatecoverage=90.4;identity=98.7;matches=297;mismatches=4;indels=0;unknowns=0;Target=comp143631_c0_seq1 320 20 .;CDS_Target=comp143631_c0_seq1 243 82 .;locus=RLOC_00013154
Chr1	stalkie_big_nohaplotig	exon	161312998	161313298	98	-	.	Parent=comp143631_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161313075	161313236	.	-	0	Parent=comp143631_c0_seq1.mrna1
Chr1	gffcl	locus	161331437	161331777	.	+	.	ID=RLOC_00013155;geneIDs=comp149885_c0_seq1.path1;transcripts=comp149885_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161331437	161331777	.	+	.	ID=comp149885_c0_seq1.mrna1;geneID=comp149885_c0_seq1.path1;Name=comp149885_c0_seq1;Dir=indeterminatecoverage=98.3;identity=96.2;matches=328;mismatches=13;indels=0;unknowns=0;Target=comp149885_c0_seq1 341 1 .;CDS_Target=comp149885_c0_seq1 218 42 .;locus=RLOC_00013155
Chr1	stalkie_big_nohaplotig	exon	161331437	161331777	96	+	.	Parent=comp149885_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161331478	161331654	.	+	0	Parent=comp149885_c0_seq1.mrna1
Chr1	gffcl	locus	161349784	161350307	.	+	.	ID=RLOC_00013156;geneIDs=comp150701_c0_seq1.path1;transcripts=comp150701_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161349784	161350307	.	+	.	ID=comp150701_c0_seq1.mrna1;geneID=comp150701_c0_seq1.path1;Name=comp150701_c0_seq1;Dir=indeterminatecoverage=57.2;identity=99.1;matches=522;mismatches=2;indels=3;unknowns=0;Target=comp150701_c0_seq1 552 26 .;CDS_Target=comp150701_c0_seq1 384 28 .;locus=RLOC_00013156
Chr1	stalkie_big_nohaplotig	exon	161349784	161350307	99	+	.	Parent=comp150701_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161349786	161350139	.	+	0	Parent=comp150701_c0_seq1.mrna1
Chr1	gffcl	locus	161374944	163389717	.	.	.	ID=RLOC_00013157;geneIDs=comp119059_c0_seq1.path1,comp154652_c0_seq1.path1;transcripts=comp154652_c0_seq1.mrna1,comp119059_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161374944	163389717	.	-	.	ID=comp154652_c0_seq1.mrna1;geneID=comp154652_c0_seq1.path1;Name=comp154652_c0_seq1;Dir=indeterminatecoverage=41.3;identity=99.0;matches=568;mismatches=3;indels=3;unknowns=0;locus=RLOC_00013157
Chr1	stalkie_big_nohaplotig	exon	161374944	161374973	87	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 1222 1192 .
Chr1	stalkie_big_nohaplotig	exon	161379319	161379323	100	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 1191 1187 .
Chr1	stalkie_big_nohaplotig	exon	161382019	161382025	100	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 1186 1180 .
Chr1	stalkie_big_nohaplotig	exon	161385582	161385589	100	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 1179 1172 .
Chr1	stalkie_big_nohaplotig	exon	161387046	161387054	100	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 1169 1161 .
Chr1	stalkie_big_nohaplotig	exon	161391717	161391718	100	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 1160 1159 .
Chr1	stalkie_big_nohaplotig	exon	161395704	161395708	100	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 1158 1154 .
Chr1	stalkie_big_nohaplotig	exon	161403413	161403415	100	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 1153 1151 .
Chr1	stalkie_big_nohaplotig	exon	161419667	161419670	100	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 1150 1147 .
Chr1	stalkie_big_nohaplotig	exon	161419996	161420005	100	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 1146 1137 .
Chr1	stalkie_big_nohaplotig	exon	161438543	161438547	100	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 1136 1132 .
Chr1	stalkie_big_nohaplotig	exon	161442800	161442804	100	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 1131 1127 .
Chr1	stalkie_big_nohaplotig	exon	161445784	161445787	100	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 1126 1123 .
Chr1	stalkie_big_nohaplotig	exon	161445980	161445989	100	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 1122 1113 .
Chr1	stalkie_big_nohaplotig	exon	161447860	161447864	100	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 1112 1108 .
Chr1	stalkie_big_nohaplotig	exon	161458933	161458938	100	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 1107 1102 .
Chr1	stalkie_big_nohaplotig	exon	161462940	161462952	100	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 1101 1089 .
Chr1	stalkie_big_nohaplotig	exon	161465303	161465313	100	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 1083 1073 .
Chr1	stalkie_big_nohaplotig	exon	161467344	161467346	100	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 1072 1070 .
Chr1	stalkie_big_nohaplotig	exon	161482502	161482504	100	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 1069 1067 .
Chr1	stalkie_big_nohaplotig	exon	161495146	161495148	100	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 1066 1064 .
Chr1	stalkie_big_nohaplotig	exon	163372391	163372677	99	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 1063 775 .
Chr1	stalkie_big_nohaplotig	exon	163381128	163381148	100	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 774 754 .
Chr1	stalkie_big_nohaplotig	exon	163389606	163389717	100	-	.	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 753 642 .
Chr1	stalkie_big_nohaplotig	CDS	163381145	163381148	.	-	1	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 757 754 .
Chr1	stalkie_big_nohaplotig	CDS	163389606	163389715	.	-	0	Parent=comp154652_c0_seq1.mrna1;Target=comp154652_c0_seq1 753 644 .
Chr1	stalkie_big_nohaplotig	mRNA	161395031	161395832	.	+	.	ID=comp119059_c0_seq1.mrna1;geneID=comp119059_c0_seq1.path1;Name=comp119059_c0_seq1;Dir=indeterminatecoverage=98.2;identity=99.6;matches=800;mismatches=2;indels=1;unknowns=0;Target=comp119059_c0_seq1 818 16 .;CDS_Target=comp119059_c0_seq1 54 16 .;locus=RLOC_00013157
Chr1	stalkie_big_nohaplotig	exon	161395031	161395832	99	+	.	Parent=comp119059_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161395031	161395068	.	+	0	Parent=comp119059_c0_seq1.mrna1
Chr1	gffcl	locus	161385996	161386681	.	-	.	ID=RLOC_00013158;geneIDs=FBgn0000318.1.path1;transcripts=FBgn0000318.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161385996	161386681	.	-	.	ID=FBgn0000318.1.mrna1;geneID=FBgn0000318.1.path1;Name=FBgn0000318.1;Dir=sensecoverage=100.0;identity=99.3;matches=557;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013158
Chr1	stalkie_big_nohaplotig	exon	161385996	161386149	99	-	.	Parent=FBgn0000318.1.mrna1;Target=FBgn0000318.1 408 561 +
Chr1	stalkie_big_nohaplotig	exon	161386212	161386293	100	-	.	Parent=FBgn0000318.1.mrna1;Target=FBgn0000318.1 326 407 +
Chr1	stalkie_big_nohaplotig	exon	161386357	161386681	99	-	.	Parent=FBgn0000318.1.mrna1;Target=FBgn0000318.1 1 325 +
Chr1	stalkie_big_nohaplotig	CDS	161385996	161386149	.	-	1	Parent=FBgn0000318.1.mrna1;Target=FBgn0000318.1 408 561 +
Chr1	stalkie_big_nohaplotig	CDS	161386212	161386293	.	-	2	Parent=FBgn0000318.1.mrna1;Target=FBgn0000318.1 326 407 +
Chr1	stalkie_big_nohaplotig	CDS	161386357	161386681	.	-	0	Parent=FBgn0000318.1.mrna1;Target=FBgn0000318.1 1 325 +
Chr1	gffcl	locus	161387675	161387818	.	+	.	ID=RLOC_00013159;geneIDs=comp163912_c0_seq1.path1;transcripts=comp163912_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161387675	161387818	.	+	.	ID=comp163912_c0_seq1.mrna1;geneID=comp163912_c0_seq1.path1;Name=comp163912_c0_seq1;Dir=indeterminatecoverage=44.4;identity=99.3;matches=143;mismatches=1;indels=0;unknowns=0;Target=comp163912_c0_seq1 144 1 .;CDS_Target=comp163912_c0_seq1 45 1 .;locus=RLOC_00013159
Chr1	stalkie_big_nohaplotig	exon	161387675	161387818	99	+	.	Parent=comp163912_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161387675	161387719	.	+	0	Parent=comp163912_c0_seq1.mrna1
Chr1	gffcl	locus	161391733	161392485	.	+	.	ID=RLOC_00013160;geneIDs=FBgn0000644.1.path1;transcripts=FBgn0000644.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161391733	161392485	.	+	.	ID=FBgn0000644.1.mrna1;geneID=FBgn0000644.1.path1;Name=FBgn0000644.1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=747;mismatches=3;indels=6;unknowns=0;Target=FBgn0000644.1 753 1 .;locus=RLOC_00013160
Chr1	stalkie_big_nohaplotig	exon	161391733	161392485	98	+	.	Parent=FBgn0000644.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161391733	161392485	.	+	0	Parent=FBgn0000644.1.mrna1
Chr1	gffcl	locus	161393043	161393786	.	+	.	ID=RLOC_00013161;geneIDs=comp145477_c0_seq1.path1;transcripts=comp145477_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161393043	161393786	.	+	.	ID=comp145477_c0_seq1.mrna1;geneID=comp145477_c0_seq1.path1;Name=comp145477_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.4;matches=744;mismatches=0;indels=28;unknowns=0;Target=comp145477_c0_seq1 772 1 .;CDS_Target=comp145477_c0_seq1 295 149 .;locus=RLOC_00013161
Chr1	stalkie_big_nohaplotig	exon	161393043	161393786	96	+	.	Parent=comp145477_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161393191	161393309	.	+	0	Parent=comp145477_c0_seq1.mrna1
Chr1	gffcl	locus	161398356	161412890	.	-	.	ID=RLOC_00013162;geneIDs=FBgn0011606.path1;transcripts=FBgn0011606.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161398356	161412890	.	-	.	ID=FBgn0011606.mrna1;geneID=FBgn0011606.path1;Name=FBgn0011606;Dir=sensecoverage=96.4;identity=99.6;matches=1486;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013162
Chr1	stalkie_big_nohaplotig	exon	161398356	161398939	99	-	.	Parent=FBgn0011606.mrna1;Target=FBgn0011606 965 1548 +
Chr1	stalkie_big_nohaplotig	exon	161411927	161412078	98	-	.	Parent=FBgn0011606.mrna1;Target=FBgn0011606 813 964 +
Chr1	stalkie_big_nohaplotig	exon	161412135	161412890	100	-	.	Parent=FBgn0011606.mrna1;Target=FBgn0011606 57 812 +
Chr1	stalkie_big_nohaplotig	CDS	161398356	161398939	.	-	2	Parent=FBgn0011606.mrna1;Target=FBgn0011606 965 1548 +
Chr1	stalkie_big_nohaplotig	CDS	161411927	161412078	.	-	1	Parent=FBgn0011606.mrna1;Target=FBgn0011606 813 964 +
Chr1	stalkie_big_nohaplotig	CDS	161412135	161412889	.	-	0	Parent=FBgn0011606.mrna1;Target=FBgn0011606 58 812 +
Chr1	gffcl	locus	161402712	161408678	.	+	.	ID=RLOC_00013163;geneIDs=comp148891_c0_seq1.path1;transcripts=comp148891_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161402712	161408678	.	+	.	ID=comp148891_c0_seq1.mrna1;geneID=comp148891_c0_seq1.path1;Name=comp148891_c0_seq1;Dir=antisensecoverage=99.4;identity=96.0;matches=623;mismatches=20;indels=6;unknowns=0;locus=RLOC_00013163
Chr1	stalkie_big_nohaplotig	exon	161402712	161402976	93	+	.	Parent=comp148891_c0_seq1.mrna1;Target=comp148891_c0_seq1 382 646 -
Chr1	stalkie_big_nohaplotig	exon	161408295	161408678	97	+	.	Parent=comp148891_c0_seq1.mrna1;Target=comp148891_c0_seq1 4 381 -
Chr1	stalkie_big_nohaplotig	CDS	161402712	161402976	.	+	0	Parent=comp148891_c0_seq1.mrna1;Target=comp148891_c0_seq1 382 646 .
Chr1	stalkie_big_nohaplotig	CDS	161408295	161408584	.	+	2	Parent=comp148891_c0_seq1.mrna1;Target=comp148891_c0_seq1 98 381 .
Chr1	gffcl	locus	161403545	161404068	.	+	.	ID=RLOC_00013164;geneIDs=comp151305_c0_seq1.path1;transcripts=comp151305_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161403545	161404068	.	+	.	ID=comp151305_c0_seq1.mrna1;geneID=comp151305_c0_seq1.path1;Name=comp151305_c0_seq1;Dir=indeterminatecoverage=92.4;identity=97.2;matches=515;mismatches=3;indels=12;unknowns=0;Target=comp151305_c0_seq1 540 17 .;CDS_Target=comp151305_c0_seq1 436 56 .;locus=RLOC_00013164
Chr1	stalkie_big_nohaplotig	exon	161403545	161404068	97	+	.	Parent=comp151305_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161403584	161403964	.	+	0	Parent=comp151305_c0_seq1.mrna1
Chr1	gffcl	locus	161408878	161409401	.	+	.	ID=RLOC_00013165;geneIDs=comp151305_c0_seq1.path2;transcripts=comp151305_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	161408878	161409401	.	+	.	ID=comp151305_c0_seq1.mrna2;geneID=comp151305_c0_seq1.path2;Name=comp151305_c0_seq1;Dir=indeterminatecoverage=92.4;identity=97.2;matches=515;mismatches=3;indels=12;unknowns=0;Target=comp151305_c0_seq1 540 17 .;CDS_Target=comp151305_c0_seq1 436 56 .;locus=RLOC_00013165
Chr1	stalkie_big_nohaplotig	exon	161408878	161409401	97	+	.	Parent=comp151305_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	161408917	161409297	.	+	0	Parent=comp151305_c0_seq1.mrna2
Chr1	gffcl	locus	161418075	161428764	.	-	.	ID=RLOC_00013166;geneIDs=FBgn0030964.1.path1,comp160531_c0_seq1.path1;transcripts=comp160531_c0_seq1.mrna1,FBgn0030964.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161418075	161428764	.	-	.	ID=comp160531_c0_seq1.mrna1;geneID=comp160531_c0_seq1.path1;Name=comp160531_c0_seq1;Dir=sensecoverage=93.7;identity=99.6;matches=1679;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013166
Chr1	stalkie_big_nohaplotig	exon	161418075	161418435	99	-	.	Parent=comp160531_c0_seq1.mrna1;Target=comp160531_c0_seq1 1436 1796 +
Chr1	stalkie_big_nohaplotig	exon	161418706	161418986	100	-	.	Parent=comp160531_c0_seq1.mrna1;Target=comp160531_c0_seq1 1155 1435 +
Chr1	stalkie_big_nohaplotig	exon	161421558	161421665	100	-	.	Parent=comp160531_c0_seq1.mrna1;Target=comp160531_c0_seq1 1047 1154 +
Chr1	stalkie_big_nohaplotig	exon	161421744	161421836	100	-	.	Parent=comp160531_c0_seq1.mrna1;Target=comp160531_c0_seq1 954 1046 +
Chr1	stalkie_big_nohaplotig	exon	161421938	161422048	100	-	.	Parent=comp160531_c0_seq1.mrna1;Target=comp160531_c0_seq1 843 953 +
Chr1	stalkie_big_nohaplotig	exon	161422114	161422307	100	-	.	Parent=comp160531_c0_seq1.mrna1;Target=comp160531_c0_seq1 649 842 +
Chr1	stalkie_big_nohaplotig	exon	161422563	161422589	96	-	.	Parent=comp160531_c0_seq1.mrna1;Target=comp160531_c0_seq1 622 648 +
Chr1	stalkie_big_nohaplotig	exon	161424141	161424246	100	-	.	Parent=comp160531_c0_seq1.mrna1;Target=comp160531_c0_seq1 516 621 +
Chr1	stalkie_big_nohaplotig	exon	161428361	161428764	99	-	.	Parent=comp160531_c0_seq1.mrna1;Target=comp160531_c0_seq1 112 515 +
Chr1	stalkie_big_nohaplotig	CDS	161418963	161418986	.	-	0	Parent=comp160531_c0_seq1.mrna1;Target=comp160531_c0_seq1 1155 1178 +
Chr1	stalkie_big_nohaplotig	CDS	161421558	161421665	.	-	0	Parent=comp160531_c0_seq1.mrna1;Target=comp160531_c0_seq1 1047 1154 +
Chr1	stalkie_big_nohaplotig	CDS	161421744	161421836	.	-	0	Parent=comp160531_c0_seq1.mrna1;Target=comp160531_c0_seq1 954 1046 +
Chr1	stalkie_big_nohaplotig	CDS	161421938	161422048	.	-	0	Parent=comp160531_c0_seq1.mrna1;Target=comp160531_c0_seq1 843 953 +
Chr1	stalkie_big_nohaplotig	CDS	161422114	161422307	.	-	2	Parent=comp160531_c0_seq1.mrna1;Target=comp160531_c0_seq1 649 842 +
Chr1	stalkie_big_nohaplotig	CDS	161422563	161422589	.	-	2	Parent=comp160531_c0_seq1.mrna1;Target=comp160531_c0_seq1 622 648 +
Chr1	stalkie_big_nohaplotig	CDS	161424141	161424246	.	-	0	Parent=comp160531_c0_seq1.mrna1;Target=comp160531_c0_seq1 516 621 +
Chr1	stalkie_big_nohaplotig	CDS	161428361	161428561	.	-	0	Parent=comp160531_c0_seq1.mrna1;Target=comp160531_c0_seq1 315 515 +
Chr1	stalkie_big_nohaplotig	mRNA	161418340	161428567	.	-	.	ID=FBgn0030964.1.mrna1;geneID=FBgn0030964.1.path1;Name=FBgn0030964.1;Dir=sensecoverage=100.0;identity=99.9;matches=941;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013166
Chr1	stalkie_big_nohaplotig	exon	161418340	161418435	100	-	.	Parent=FBgn0030964.1.mrna1;Target=FBgn0030964.1 847 942 +
Chr1	stalkie_big_nohaplotig	exon	161421558	161421665	100	-	.	Parent=FBgn0030964.1.mrna1;Target=FBgn0030964.1 739 846 +
Chr1	stalkie_big_nohaplotig	exon	161421744	161421836	100	-	.	Parent=FBgn0030964.1.mrna1;Target=FBgn0030964.1 646 738 +
Chr1	stalkie_big_nohaplotig	exon	161421938	161422048	100	-	.	Parent=FBgn0030964.1.mrna1;Target=FBgn0030964.1 535 645 +
Chr1	stalkie_big_nohaplotig	exon	161422114	161422307	100	-	.	Parent=FBgn0030964.1.mrna1;Target=FBgn0030964.1 341 534 +
Chr1	stalkie_big_nohaplotig	exon	161422563	161422589	96	-	.	Parent=FBgn0030964.1.mrna1;Target=FBgn0030964.1 314 340 +
Chr1	stalkie_big_nohaplotig	exon	161424141	161424246	100	-	.	Parent=FBgn0030964.1.mrna1;Target=FBgn0030964.1 208 313 +
Chr1	stalkie_big_nohaplotig	exon	161428361	161428567	100	-	.	Parent=FBgn0030964.1.mrna1;Target=FBgn0030964.1 1 207 +
Chr1	stalkie_big_nohaplotig	CDS	161418340	161418435	.	-	0	Parent=FBgn0030964.1.mrna1;Target=FBgn0030964.1 847 942 +
Chr1	stalkie_big_nohaplotig	CDS	161421558	161421665	.	-	0	Parent=FBgn0030964.1.mrna1;Target=FBgn0030964.1 739 846 +
Chr1	stalkie_big_nohaplotig	CDS	161421744	161421836	.	-	0	Parent=FBgn0030964.1.mrna1;Target=FBgn0030964.1 646 738 +
Chr1	stalkie_big_nohaplotig	CDS	161421938	161422048	.	-	0	Parent=FBgn0030964.1.mrna1;Target=FBgn0030964.1 535 645 +
Chr1	stalkie_big_nohaplotig	CDS	161422114	161422307	.	-	2	Parent=FBgn0030964.1.mrna1;Target=FBgn0030964.1 341 534 +
Chr1	stalkie_big_nohaplotig	CDS	161422563	161422589	.	-	2	Parent=FBgn0030964.1.mrna1;Target=FBgn0030964.1 314 340 +
Chr1	stalkie_big_nohaplotig	CDS	161424141	161424246	.	-	0	Parent=FBgn0030964.1.mrna1;Target=FBgn0030964.1 208 313 +
Chr1	stalkie_big_nohaplotig	CDS	161428361	161428567	.	-	0	Parent=FBgn0030964.1.mrna1;Target=FBgn0030964.1 1 207 +
Chr1	gffcl	locus	161442871	161445553	.	+	.	ID=RLOC_00013167;geneIDs=FBgn0030973.1.path1;transcripts=FBgn0030973.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161442871	161445553	.	+	.	ID=FBgn0030973.1.mrna1;geneID=FBgn0030973.1.path1;Name=FBgn0030973.1;Dir=sensecoverage=100.0;identity=99.9;matches=1409;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013167
Chr1	stalkie_big_nohaplotig	exon	161442871	161443027	100	+	.	Parent=FBgn0030973.1.mrna1;Target=FBgn0030973.1 1 157 +
Chr1	stalkie_big_nohaplotig	exon	161443200	161443333	100	+	.	Parent=FBgn0030973.1.mrna1;Target=FBgn0030973.1 158 291 +
Chr1	stalkie_big_nohaplotig	exon	161443407	161443769	99	+	.	Parent=FBgn0030973.1.mrna1;Target=FBgn0030973.1 292 654 +
Chr1	stalkie_big_nohaplotig	exon	161443969	161444260	100	+	.	Parent=FBgn0030973.1.mrna1;Target=FBgn0030973.1 655 946 +
Chr1	stalkie_big_nohaplotig	exon	161444332	161444491	100	+	.	Parent=FBgn0030973.1.mrna1;Target=FBgn0030973.1 947 1106 +
Chr1	stalkie_big_nohaplotig	exon	161444563	161444722	100	+	.	Parent=FBgn0030973.1.mrna1;Target=FBgn0030973.1 1107 1266 +
Chr1	stalkie_big_nohaplotig	exon	161445410	161445553	100	+	.	Parent=FBgn0030973.1.mrna1;Target=FBgn0030973.1 1267 1410 +
Chr1	stalkie_big_nohaplotig	CDS	161442871	161443027	.	+	0	Parent=FBgn0030973.1.mrna1;Target=FBgn0030973.1 1 157 +
Chr1	stalkie_big_nohaplotig	CDS	161443200	161443333	.	+	2	Parent=FBgn0030973.1.mrna1;Target=FBgn0030973.1 158 291 +
Chr1	stalkie_big_nohaplotig	CDS	161443407	161443769	.	+	0	Parent=FBgn0030973.1.mrna1;Target=FBgn0030973.1 292 654 +
Chr1	stalkie_big_nohaplotig	CDS	161443969	161444260	.	+	0	Parent=FBgn0030973.1.mrna1;Target=FBgn0030973.1 655 946 +
Chr1	stalkie_big_nohaplotig	CDS	161444332	161444491	.	+	2	Parent=FBgn0030973.1.mrna1;Target=FBgn0030973.1 947 1106 +
Chr1	stalkie_big_nohaplotig	CDS	161444563	161444722	.	+	1	Parent=FBgn0030973.1.mrna1;Target=FBgn0030973.1 1107 1266 +
Chr1	stalkie_big_nohaplotig	CDS	161445410	161445553	.	+	0	Parent=FBgn0030973.1.mrna1;Target=FBgn0030973.1 1267 1410 +
Chr1	gffcl	locus	161447968	161448630	.	+	.	ID=RLOC_00013168;geneIDs=comp148540_c0_seq1.path1;transcripts=comp148540_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161447968	161448630	.	+	.	ID=comp148540_c0_seq1.mrna1;geneID=comp148540_c0_seq1.path1;Name=comp148540_c0_seq1;Dir=indeterminatecoverage=97.1;identity=98.8;matches=655;mismatches=8;indels=0;unknowns=0;Target=comp148540_c0_seq1 683 21 .;CDS_Target=comp148540_c0_seq1 544 23 .;locus=RLOC_00013168
Chr1	stalkie_big_nohaplotig	exon	161447968	161448630	98	+	.	Parent=comp148540_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161447970	161448491	.	+	0	Parent=comp148540_c0_seq1.mrna1
Chr1	gffcl	locus	161449029	161450268	.	+	.	ID=RLOC_00013169;geneIDs=comp144462_c0_seq1.path1;transcripts=comp144462_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161449029	161450268	.	+	.	ID=comp144462_c0_seq1.mrna1;geneID=comp144462_c0_seq1.path1;Name=comp144462_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=564;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013169
Chr1	stalkie_big_nohaplotig	exon	161449029	161449528	99	+	.	Parent=comp144462_c0_seq1.mrna1;Target=comp144462_c0_seq1 500 1 .
Chr1	stalkie_big_nohaplotig	exon	161450201	161450268	100	+	.	Parent=comp144462_c0_seq1.mrna1;Target=comp144462_c0_seq1 568 501 .
Chr1	stalkie_big_nohaplotig	CDS	161449158	161449528	.	+	0	Parent=comp144462_c0_seq1.mrna1;Target=comp144462_c0_seq1 500 130 .
Chr1	stalkie_big_nohaplotig	CDS	161450201	161450267	.	+	1	Parent=comp144462_c0_seq1.mrna1;Target=comp144462_c0_seq1 567 501 .
Chr1	gffcl	locus	161450955	161451262	.	-	.	ID=RLOC_00013170;geneIDs=comp135903_c0_seq1.path1;transcripts=comp135903_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161450955	161451262	.	-	.	ID=comp135903_c0_seq1.mrna1;geneID=comp135903_c0_seq1.path1;Name=comp135903_c0_seq1;Dir=indeterminatecoverage=99.4;identity=95.5;matches=295;mismatches=13;indels=1;unknowns=0;Target=comp135903_c0_seq1 309 1 .;CDS_Target=comp135903_c0_seq1 41 3 .;locus=RLOC_00013170
Chr1	stalkie_big_nohaplotig	exon	161450955	161451262	95	-	.	Parent=comp135903_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161451223	161451260	.	-	0	Parent=comp135903_c0_seq1.mrna1
Chr1	gffcl	locus	161454055	161454286	.	+	.	ID=RLOC_00013171;geneIDs=comp151353_c0_seq1.path1;transcripts=comp151353_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161454055	161454286	.	+	.	ID=comp151353_c0_seq1.mrna1;geneID=comp151353_c0_seq1.path1;Name=comp151353_c0_seq1;Dir=indeterminatecoverage=97.1;identity=98.3;matches=228;mismatches=4;indels=0;unknowns=0;Target=comp151353_c0_seq1 233 2 .;CDS_Target=comp151353_c0_seq1 182 3 .;locus=RLOC_00013171
Chr1	stalkie_big_nohaplotig	exon	161454055	161454286	98	+	.	Parent=comp151353_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161454056	161454235	.	+	0	Parent=comp151353_c0_seq1.mrna1
Chr1	gffcl	locus	161461368	161461843	.	-	.	ID=RLOC_00013172;geneIDs=comp148641_c0_seq1.path1;transcripts=comp148641_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161461368	161461843	.	-	.	ID=comp148641_c0_seq1.mrna1;geneID=comp148641_c0_seq1.path1;Name=comp148641_c0_seq1;Dir=indeterminatecoverage=98.5;identity=97.3;matches=464;mismatches=9;indels=4;unknowns=0;Target=comp148641_c0_seq1 474 1 .;CDS_Target=comp148641_c0_seq1 375 64 .;locus=RLOC_00013172
Chr1	stalkie_big_nohaplotig	exon	161461368	161461843	97	-	.	Parent=comp148641_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161461466	161461780	.	-	0	Parent=comp148641_c0_seq1.mrna1
Chr1	gffcl	locus	161478294	161479152	.	+	.	ID=RLOC_00013173;geneIDs=FBgn0030102.1.path1;transcripts=FBgn0030102.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161478294	161479152	.	+	.	ID=FBgn0030102.1.mrna1;geneID=FBgn0030102.1.path1;Name=FBgn0030102.1;Dir=indeterminatecoverage=66.4;identity=99.8;matches=857;mismatches=2;indels=0;unknowns=0;Target=FBgn0030102.1 859 1 .;CDS_Target=FBgn0030102.1 858 1 .;locus=RLOC_00013173
Chr1	stalkie_big_nohaplotig	exon	161478294	161479152	99	+	.	Parent=FBgn0030102.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161478294	161479151	.	+	0	Parent=FBgn0030102.1.mrna1
Chr1	gffcl	locus	161483095	161483405	.	+	.	ID=RLOC_00013174;geneIDs=comp83175_c0_seq1.path1;transcripts=comp83175_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161483095	161483405	.	+	.	ID=comp83175_c0_seq1.mrna1;geneID=comp83175_c0_seq1.path1;Name=comp83175_c0_seq1;Dir=indeterminatecoverage=99.7;identity=97.1;matches=302;mismatches=9;indels=0;unknowns=0;Target=comp83175_c0_seq1 312 2 .;CDS_Target=comp83175_c0_seq1 96 88 .;locus=RLOC_00013174
Chr1	stalkie_big_nohaplotig	exon	161483095	161483405	97	+	.	Parent=comp83175_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161483181	161483189	.	+	0	Parent=comp83175_c0_seq1.mrna1
Chr1	gffcl	locus	161484059	161495897	.	+	.	ID=RLOC_00013175;geneIDs=FBgn0053548.1.path1,FBgn0053548.2.path1;transcripts=FBgn0053548.1.mrna1,FBgn0053548.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161484059	161495897	.	+	.	ID=FBgn0053548.1.mrna1;geneID=FBgn0053548.1.path1;Name=FBgn0053548.1;Dir=sensecoverage=100.0;identity=99.2;matches=1333;mismatches=11;indels=0;unknowns=0;locus=RLOC_00013175
Chr1	stalkie_big_nohaplotig	exon	161484059	161484967	98	+	.	Parent=FBgn0053548.1.mrna1;Target=FBgn0053548.1 1 909 +
Chr1	stalkie_big_nohaplotig	exon	161495463	161495897	100	+	.	Parent=FBgn0053548.1.mrna1;Target=FBgn0053548.1 910 1344 +
Chr1	stalkie_big_nohaplotig	CDS	161484059	161484967	.	+	0	Parent=FBgn0053548.1.mrna1;Target=FBgn0053548.1 1 909 +
Chr1	stalkie_big_nohaplotig	CDS	161495463	161495897	.	+	0	Parent=FBgn0053548.1.mrna1;Target=FBgn0053548.1 910 1344 +
Chr1	stalkie_big_nohaplotig	mRNA	161489887	161495897	.	+	.	ID=FBgn0053548.2.mrna1;geneID=FBgn0053548.2.path1;Name=FBgn0053548.2;Dir=sensecoverage=100.0;identity=99.8;matches=1401;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013175
Chr1	stalkie_big_nohaplotig	exon	161489887	161490855	99	+	.	Parent=FBgn0053548.2.mrna1;Target=FBgn0053548.2 1 969 +
Chr1	stalkie_big_nohaplotig	exon	161495463	161495897	100	+	.	Parent=FBgn0053548.2.mrna1;Target=FBgn0053548.2 970 1404 +
Chr1	stalkie_big_nohaplotig	CDS	161489887	161490855	.	+	0	Parent=FBgn0053548.2.mrna1;Target=FBgn0053548.2 1 969 +
Chr1	stalkie_big_nohaplotig	CDS	161495463	161495897	.	+	0	Parent=FBgn0053548.2.mrna1;Target=FBgn0053548.2 970 1404 +
Chr1	gffcl	locus	161498787	161502162	.	.	.	ID=RLOC_00013176;geneIDs=FBgn0023550.1.path1,comp113228_c0_seq1.path1;transcripts=FBgn0023550.1.mrna1,comp113228_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161498787	161502162	.	+	.	ID=FBgn0023550.1.mrna1;geneID=FBgn0023550.1.path1;Name=FBgn0023550.1;Dir=sensecoverage=100.0;identity=99.7;matches=1522;mismatches=5;indels=0;unknowns=0;locus=RLOC_00013176
Chr1	stalkie_big_nohaplotig	exon	161498787	161498850	100	+	.	Parent=FBgn0023550.1.mrna1;Target=FBgn0023550.1 1 64 +
Chr1	stalkie_big_nohaplotig	exon	161499150	161499277	99	+	.	Parent=FBgn0023550.1.mrna1;Target=FBgn0023550.1 65 192 +
Chr1	stalkie_big_nohaplotig	exon	161499366	161499671	100	+	.	Parent=FBgn0023550.1.mrna1;Target=FBgn0023550.1 193 498 +
Chr1	stalkie_big_nohaplotig	exon	161499724	161499812	100	+	.	Parent=FBgn0023550.1.mrna1;Target=FBgn0023550.1 499 587 +
Chr1	stalkie_big_nohaplotig	exon	161500881	161500990	100	+	.	Parent=FBgn0023550.1.mrna1;Target=FBgn0023550.1 588 697 +
Chr1	stalkie_big_nohaplotig	exon	161501076	161501277	100	+	.	Parent=FBgn0023550.1.mrna1;Target=FBgn0023550.1 698 899 +
Chr1	stalkie_big_nohaplotig	exon	161501345	161501522	100	+	.	Parent=FBgn0023550.1.mrna1;Target=FBgn0023550.1 900 1077 +
Chr1	stalkie_big_nohaplotig	exon	161501583	161501773	97	+	.	Parent=FBgn0023550.1.mrna1;Target=FBgn0023550.1 1078 1268 +
Chr1	stalkie_big_nohaplotig	exon	161501830	161501979	100	+	.	Parent=FBgn0023550.1.mrna1;Target=FBgn0023550.1 1269 1418 +
Chr1	stalkie_big_nohaplotig	exon	161502054	161502162	100	+	.	Parent=FBgn0023550.1.mrna1;Target=FBgn0023550.1 1419 1527 +
Chr1	stalkie_big_nohaplotig	CDS	161498787	161498850	.	+	0	Parent=FBgn0023550.1.mrna1;Target=FBgn0023550.1 1 64 +
Chr1	stalkie_big_nohaplotig	CDS	161499150	161499277	.	+	2	Parent=FBgn0023550.1.mrna1;Target=FBgn0023550.1 65 192 +
Chr1	stalkie_big_nohaplotig	CDS	161499366	161499671	.	+	0	Parent=FBgn0023550.1.mrna1;Target=FBgn0023550.1 193 498 +
Chr1	stalkie_big_nohaplotig	CDS	161499724	161499812	.	+	0	Parent=FBgn0023550.1.mrna1;Target=FBgn0023550.1 499 587 +
Chr1	stalkie_big_nohaplotig	CDS	161500881	161500990	.	+	1	Parent=FBgn0023550.1.mrna1;Target=FBgn0023550.1 588 697 +
Chr1	stalkie_big_nohaplotig	CDS	161501076	161501277	.	+	2	Parent=FBgn0023550.1.mrna1;Target=FBgn0023550.1 698 899 +
Chr1	stalkie_big_nohaplotig	CDS	161501345	161501522	.	+	1	Parent=FBgn0023550.1.mrna1;Target=FBgn0023550.1 900 1077 +
Chr1	stalkie_big_nohaplotig	CDS	161501583	161501773	.	+	0	Parent=FBgn0023550.1.mrna1;Target=FBgn0023550.1 1078 1268 +
Chr1	stalkie_big_nohaplotig	CDS	161501830	161501979	.	+	1	Parent=FBgn0023550.1.mrna1;Target=FBgn0023550.1 1269 1418 +
Chr1	stalkie_big_nohaplotig	CDS	161502054	161502162	.	+	1	Parent=FBgn0023550.1.mrna1;Target=FBgn0023550.1 1419 1527 +
Chr1	stalkie_big_nohaplotig	mRNA	161500038	161500903	.	-	.	ID=comp113228_c0_seq1.mrna1;geneID=comp113228_c0_seq1.path1;Name=comp113228_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=855;mismatches=11;indels=0;unknowns=0;Target=comp113228_c0_seq1 866 1 .;CDS_Target=comp113228_c0_seq1 603 487 .;locus=RLOC_00013176
Chr1	stalkie_big_nohaplotig	exon	161500038	161500903	98	-	.	Parent=comp113228_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161500301	161500417	.	-	0	Parent=comp113228_c0_seq1.mrna1
Chr1	gffcl	locus	161504849	161520131	.	-	.	ID=RLOC_00013177;geneIDs=FBgn0023549.1.path1;transcripts=FBgn0023549.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161504849	161520131	.	-	.	ID=FBgn0023549.1.mrna1;geneID=FBgn0023549.1.path1;Name=FBgn0023549.1;Dir=sensecoverage=100.0;identity=99.7;matches=1866;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013177
Chr1	stalkie_big_nohaplotig	exon	161504849	161505006	100	-	.	Parent=FBgn0023549.1.mrna1;Target=FBgn0023549.1 1715 1872 +
Chr1	stalkie_big_nohaplotig	exon	161505082	161505282	100	-	.	Parent=FBgn0023549.1.mrna1;Target=FBgn0023549.1 1514 1714 +
Chr1	stalkie_big_nohaplotig	exon	161505578	161505908	100	-	.	Parent=FBgn0023549.1.mrna1;Target=FBgn0023549.1 1183 1513 +
Chr1	stalkie_big_nohaplotig	exon	161511958	161512071	100	-	.	Parent=FBgn0023549.1.mrna1;Target=FBgn0023549.1 1069 1182 +
Chr1	stalkie_big_nohaplotig	exon	161513518	161513709	100	-	.	Parent=FBgn0023549.1.mrna1;Target=FBgn0023549.1 877 1068 +
Chr1	stalkie_big_nohaplotig	exon	161513864	161514242	98	-	.	Parent=FBgn0023549.1.mrna1;Target=FBgn0023549.1 498 876 +
Chr1	stalkie_big_nohaplotig	exon	161514387	161514570	98	-	.	Parent=FBgn0023549.1.mrna1;Target=FBgn0023549.1 314 497 +
Chr1	stalkie_big_nohaplotig	exon	161515199	161515318	100	-	.	Parent=FBgn0023549.1.mrna1;Target=FBgn0023549.1 194 313 +
Chr1	stalkie_big_nohaplotig	exon	161519939	161520131	100	-	.	Parent=FBgn0023549.1.mrna1;Target=FBgn0023549.1 1 193 +
Chr1	stalkie_big_nohaplotig	CDS	161504849	161505006	.	-	2	Parent=FBgn0023549.1.mrna1;Target=FBgn0023549.1 1715 1872 +
Chr1	stalkie_big_nohaplotig	CDS	161505082	161505282	.	-	2	Parent=FBgn0023549.1.mrna1;Target=FBgn0023549.1 1514 1714 +
Chr1	stalkie_big_nohaplotig	CDS	161505578	161505908	.	-	0	Parent=FBgn0023549.1.mrna1;Target=FBgn0023549.1 1183 1513 +
Chr1	stalkie_big_nohaplotig	CDS	161511958	161512071	.	-	0	Parent=FBgn0023549.1.mrna1;Target=FBgn0023549.1 1069 1182 +
Chr1	stalkie_big_nohaplotig	CDS	161513518	161513709	.	-	0	Parent=FBgn0023549.1.mrna1;Target=FBgn0023549.1 877 1068 +
Chr1	stalkie_big_nohaplotig	CDS	161513864	161514242	.	-	1	Parent=FBgn0023549.1.mrna1;Target=FBgn0023549.1 498 876 +
Chr1	stalkie_big_nohaplotig	CDS	161514387	161514570	.	-	2	Parent=FBgn0023549.1.mrna1;Target=FBgn0023549.1 314 497 +
Chr1	stalkie_big_nohaplotig	CDS	161515199	161515318	.	-	2	Parent=FBgn0023549.1.mrna1;Target=FBgn0023549.1 194 313 +
Chr1	stalkie_big_nohaplotig	CDS	161519939	161520131	.	-	0	Parent=FBgn0023549.1.mrna1;Target=FBgn0023549.1 1 193 +
Chr1	gffcl	locus	161506312	161506922	.	+	.	ID=RLOC_00013178;geneIDs=comp114428_c0_seq1.path1;transcripts=comp114428_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161506312	161506922	.	+	.	ID=comp114428_c0_seq1.mrna1;geneID=comp114428_c0_seq1.path1;Name=comp114428_c0_seq1;Dir=indeterminatecoverage=95.3;identity=99.3;matches=607;mismatches=4;indels=0;unknowns=0;Target=comp114428_c0_seq1 611 1 .;CDS_Target=comp114428_c0_seq1 514 176 .;locus=RLOC_00013178
Chr1	stalkie_big_nohaplotig	exon	161506312	161506922	99	+	.	Parent=comp114428_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161506487	161506825	.	+	0	Parent=comp114428_c0_seq1.mrna1
Chr1	gffcl	locus	161508101	161511267	.	.	.	ID=RLOC_00013179;geneIDs=FBgn0023550.2.path1,comp76925_c1_seq1.path1;transcripts=FBgn0023550.2.mrna1,comp76925_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161508101	161511267	.	+	.	ID=FBgn0023550.2.mrna1;geneID=FBgn0023550.2.path1;Name=FBgn0023550.2;Dir=sensecoverage=100.0;identity=99.9;matches=1565;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013179
Chr1	stalkie_big_nohaplotig	exon	161508101	161508230	100	+	.	Parent=FBgn0023550.2.mrna1;Target=FBgn0023550.2 1 130 +
Chr1	stalkie_big_nohaplotig	exon	161508311	161508438	99	+	.	Parent=FBgn0023550.2.mrna1;Target=FBgn0023550.2 131 258 +
Chr1	stalkie_big_nohaplotig	exon	161508506	161508811	100	+	.	Parent=FBgn0023550.2.mrna1;Target=FBgn0023550.2 259 564 +
Chr1	stalkie_big_nohaplotig	exon	161508940	161509028	100	+	.	Parent=FBgn0023550.2.mrna1;Target=FBgn0023550.2 565 653 +
Chr1	stalkie_big_nohaplotig	exon	161509090	161509199	100	+	.	Parent=FBgn0023550.2.mrna1;Target=FBgn0023550.2 654 763 +
Chr1	stalkie_big_nohaplotig	exon	161509758	161509959	100	+	.	Parent=FBgn0023550.2.mrna1;Target=FBgn0023550.2 764 965 +
Chr1	stalkie_big_nohaplotig	exon	161510053	161510227	100	+	.	Parent=FBgn0023550.2.mrna1;Target=FBgn0023550.2 966 1140 +
Chr1	stalkie_big_nohaplotig	exon	161510285	161510475	100	+	.	Parent=FBgn0023550.2.mrna1;Target=FBgn0023550.2 1141 1331 +
Chr1	stalkie_big_nohaplotig	exon	161510781	161510930	100	+	.	Parent=FBgn0023550.2.mrna1;Target=FBgn0023550.2 1332 1481 +
Chr1	stalkie_big_nohaplotig	exon	161511183	161511267	100	+	.	Parent=FBgn0023550.2.mrna1;Target=FBgn0023550.2 1482 1566 +
Chr1	stalkie_big_nohaplotig	CDS	161508101	161508230	.	+	0	Parent=FBgn0023550.2.mrna1;Target=FBgn0023550.2 1 130 +
Chr1	stalkie_big_nohaplotig	CDS	161508311	161508438	.	+	2	Parent=FBgn0023550.2.mrna1;Target=FBgn0023550.2 131 258 +
Chr1	stalkie_big_nohaplotig	CDS	161508506	161508811	.	+	0	Parent=FBgn0023550.2.mrna1;Target=FBgn0023550.2 259 564 +
Chr1	stalkie_big_nohaplotig	CDS	161508940	161509028	.	+	0	Parent=FBgn0023550.2.mrna1;Target=FBgn0023550.2 565 653 +
Chr1	stalkie_big_nohaplotig	CDS	161509090	161509199	.	+	1	Parent=FBgn0023550.2.mrna1;Target=FBgn0023550.2 654 763 +
Chr1	stalkie_big_nohaplotig	CDS	161509758	161509959	.	+	2	Parent=FBgn0023550.2.mrna1;Target=FBgn0023550.2 764 965 +
Chr1	stalkie_big_nohaplotig	CDS	161510053	161510227	.	+	1	Parent=FBgn0023550.2.mrna1;Target=FBgn0023550.2 966 1140 +
Chr1	stalkie_big_nohaplotig	CDS	161510285	161510475	.	+	0	Parent=FBgn0023550.2.mrna1;Target=FBgn0023550.2 1141 1331 +
Chr1	stalkie_big_nohaplotig	CDS	161510781	161510930	.	+	1	Parent=FBgn0023550.2.mrna1;Target=FBgn0023550.2 1332 1481 +
Chr1	stalkie_big_nohaplotig	CDS	161511183	161511267	.	+	1	Parent=FBgn0023550.2.mrna1;Target=FBgn0023550.2 1482 1566 +
Chr1	stalkie_big_nohaplotig	mRNA	161509176	161509504	.	-	.	ID=comp76925_c1_seq1.mrna1;geneID=comp76925_c1_seq1.path1;Name=comp76925_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=329;mismatches=0;indels=0;unknowns=0;Target=comp76925_c1_seq1 329 1 .;CDS_Target=comp76925_c1_seq1 180 46 .;locus=RLOC_00013179
Chr1	stalkie_big_nohaplotig	exon	161509176	161509504	100	-	.	Parent=comp76925_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161509325	161509459	.	-	0	Parent=comp76925_c1_seq1.mrna1
Chr1	gffcl	locus	161588270	161861336	.	-	.	ID=RLOC_00013180;geneIDs=FBgn0032295.1.path1,FBgn0053172.1.path1,comp156794_c1_seq1.path1;transcripts=comp156794_c1_seq1.mrna1,FBgn0053172.1.mrna1,FBgn0032295.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161588270	161861336	.	-	.	ID=comp156794_c1_seq1.mrna1;geneID=comp156794_c1_seq1.path1;Name=comp156794_c1_seq1;Dir=sensecoverage=70.8;identity=96.5;matches=2348;mismatches=24;indels=61;unknowns=0;locus=RLOC_00013180
Chr1	stalkie_big_nohaplotig	exon	161588270	161588278	100	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 2971 2979 +
Chr1	stalkie_big_nohaplotig	exon	161588297	161588306	100	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 2916 2925 +
Chr1	stalkie_big_nohaplotig	exon	161593306	161593310	100	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 2911 2915 +
Chr1	stalkie_big_nohaplotig	exon	161599129	161599137	100	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 2893 2901 +
Chr1	stalkie_big_nohaplotig	exon	161615644	161615654	81	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 2882 2892 +
Chr1	stalkie_big_nohaplotig	exon	161653506	161653515	100	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 2872 2881 +
Chr1	stalkie_big_nohaplotig	exon	161656962	161656975	85	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 2858 2871 +
Chr1	stalkie_big_nohaplotig	exon	161664450	161664452	100	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 2855 2857 +
Chr1	stalkie_big_nohaplotig	exon	161672409	161672412	100	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 2851 2854 +
Chr1	stalkie_big_nohaplotig	exon	161683340	161683352	92	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 2838 2850 +
Chr1	stalkie_big_nohaplotig	exon	161685523	161685530	100	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 2819 2826 +
Chr1	stalkie_big_nohaplotig	exon	161700115	161700127	84	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 2792 2804 +
Chr1	stalkie_big_nohaplotig	exon	161713173	161713186	78	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 2778 2791 +
Chr1	stalkie_big_nohaplotig	exon	161738511	161738542	48	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 2729 2777 +
Chr1	stalkie_big_nohaplotig	exon	161766059	161766068	100	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 2690 2699 +
Chr1	stalkie_big_nohaplotig	exon	161770690	161770705	70	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 2670 2689 +
Chr1	stalkie_big_nohaplotig	exon	161776701	161776750	20	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 2638 2647 +
Chr1	stalkie_big_nohaplotig	exon	161780414	161780424	90	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 2604 2614 +
Chr1	stalkie_big_nohaplotig	exon	161783314	161783323	100	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 2594 2603 +
Chr1	stalkie_big_nohaplotig	exon	161787386	161787398	100	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 2562 2574 +
Chr1	stalkie_big_nohaplotig	exon	161792586	161792594	100	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 2500 2508 +
Chr1	stalkie_big_nohaplotig	exon	161799660	161799662	100	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 2497 2499 +
Chr1	stalkie_big_nohaplotig	exon	161854943	161855098	100	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 1974 2129 +
Chr1	stalkie_big_nohaplotig	exon	161855157	161855685	99	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 1445 1973 +
Chr1	stalkie_big_nohaplotig	exon	161859769	161860296	100	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 917 1444 +
Chr1	stalkie_big_nohaplotig	exon	161860350	161860692	99	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 574 916 +
Chr1	stalkie_big_nohaplotig	exon	161860764	161861336	100	-	.	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 1 573 +
Chr1	stalkie_big_nohaplotig	CDS	161854963	161855098	.	-	1	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 1974 2109 +
Chr1	stalkie_big_nohaplotig	CDS	161855157	161855685	.	-	2	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 1445 1973 +
Chr1	stalkie_big_nohaplotig	CDS	161859769	161860296	.	-	2	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 917 1444 +
Chr1	stalkie_big_nohaplotig	CDS	161860350	161860692	.	-	0	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 574 916 +
Chr1	stalkie_big_nohaplotig	CDS	161860764	161861213	.	-	0	Parent=comp156794_c1_seq1.mrna1;Target=comp156794_c1_seq1 124 573 +
Chr1	stalkie_big_nohaplotig	mRNA	161778780	161782011	.	-	.	ID=FBgn0053172.1.mrna1;geneID=FBgn0053172.1.path1;Name=FBgn0053172.1;Dir=sensecoverage=99.0;identity=99.2;matches=2953;mismatches=23;indels=0;unknowns=0;locus=RLOC_00013180
Chr1	stalkie_big_nohaplotig	exon	161778780	161780967	99	-	.	Parent=FBgn0053172.1.mrna1;Target=FBgn0053172.1 803 2990 +
Chr1	stalkie_big_nohaplotig	exon	161781038	161781328	99	-	.	Parent=FBgn0053172.1.mrna1;Target=FBgn0053172.1 512 802 +
Chr1	stalkie_big_nohaplotig	exon	161781394	161781640	98	-	.	Parent=FBgn0053172.1.mrna1;Target=FBgn0053172.1 265 511 +
Chr1	stalkie_big_nohaplotig	exon	161781700	161781857	100	-	.	Parent=FBgn0053172.1.mrna1;Target=FBgn0053172.1 107 264 +
Chr1	stalkie_big_nohaplotig	exon	161781920	161782011	100	-	.	Parent=FBgn0053172.1.mrna1;Target=FBgn0053172.1 15 106 +
Chr1	stalkie_big_nohaplotig	CDS	161778782	161780967	.	-	2	Parent=FBgn0053172.1.mrna1;Target=FBgn0053172.1 803 2988 +
Chr1	stalkie_big_nohaplotig	CDS	161781038	161781328	.	-	2	Parent=FBgn0053172.1.mrna1;Target=FBgn0053172.1 512 802 +
Chr1	stalkie_big_nohaplotig	CDS	161781394	161781640	.	-	0	Parent=FBgn0053172.1.mrna1;Target=FBgn0053172.1 265 511 +
Chr1	stalkie_big_nohaplotig	CDS	161781700	161781857	.	-	2	Parent=FBgn0053172.1.mrna1;Target=FBgn0053172.1 107 264 +
Chr1	stalkie_big_nohaplotig	CDS	161781920	161782010	.	-	0	Parent=FBgn0053172.1.mrna1;Target=FBgn0053172.1 16 106 +
Chr1	stalkie_big_nohaplotig	mRNA	161857889	161861216	.	-	.	ID=FBgn0032295.1.mrna1;geneID=FBgn0032295.1.path1;Name=FBgn0032295.1;Dir=sensecoverage=100.0;identity=99.7;matches=1974;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013180
Chr1	stalkie_big_nohaplotig	exon	161857889	161858012	98	-	.	Parent=FBgn0032295.1.mrna1;Target=FBgn0032295.1 1857 1980 +
Chr1	stalkie_big_nohaplotig	exon	161858095	161858626	99	-	.	Parent=FBgn0032295.1.mrna1;Target=FBgn0032295.1 1325 1856 +
Chr1	stalkie_big_nohaplotig	exon	161859769	161860296	100	-	.	Parent=FBgn0032295.1.mrna1;Target=FBgn0032295.1 797 1324 +
Chr1	stalkie_big_nohaplotig	exon	161860350	161860692	99	-	.	Parent=FBgn0032295.1.mrna1;Target=FBgn0032295.1 454 796 +
Chr1	stalkie_big_nohaplotig	exon	161860764	161861216	100	-	.	Parent=FBgn0032295.1.mrna1;Target=FBgn0032295.1 1 453 +
Chr1	stalkie_big_nohaplotig	CDS	161857889	161858012	.	-	1	Parent=FBgn0032295.1.mrna1;Target=FBgn0032295.1 1857 1980 +
Chr1	stalkie_big_nohaplotig	CDS	161858095	161858626	.	-	2	Parent=FBgn0032295.1.mrna1;Target=FBgn0032295.1 1325 1856 +
Chr1	stalkie_big_nohaplotig	CDS	161859769	161860296	.	-	2	Parent=FBgn0032295.1.mrna1;Target=FBgn0032295.1 797 1324 +
Chr1	stalkie_big_nohaplotig	CDS	161860350	161860692	.	-	0	Parent=FBgn0032295.1.mrna1;Target=FBgn0032295.1 454 796 +
Chr1	stalkie_big_nohaplotig	CDS	161860764	161861216	.	-	0	Parent=FBgn0032295.1.mrna1;Target=FBgn0032295.1 1 453 +
Chr1	gffcl	locus	161609824	161611145	.	+	.	ID=RLOC_00013181;geneIDs=FBgn0052371.3.path1;transcripts=FBgn0052371.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161609824	161611145	.	+	.	ID=FBgn0052371.3.mrna1;geneID=FBgn0052371.3.path1;Name=FBgn0052371.3;Dir=indeterminatecoverage=99.2;identity=99.7;matches=1318;mismatches=4;indels=0;unknowns=0;Target=FBgn0052371.3 1322 1 .;CDS_Target=FBgn0052371.3 1320 1 .;locus=RLOC_00013181
Chr1	stalkie_big_nohaplotig	exon	161609824	161611145	99	+	.	Parent=FBgn0052371.3.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161609824	161611143	.	+	0	Parent=FBgn0052371.3.mrna1
Chr1	gffcl	locus	161640365	161647368	.	+	.	ID=RLOC_00013183;geneIDs=FBgn0029814.1.path1;transcripts=FBgn0029814.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161640365	161647368	.	+	.	ID=FBgn0029814.1.mrna1;geneID=FBgn0029814.1.path1;Name=FBgn0029814.1;Dir=sensecoverage=95.9;identity=99.4;matches=2176;mismatches=14;indels=0;unknowns=0;locus=RLOC_00013183
Chr1	stalkie_big_nohaplotig	exon	161640365	161640494	100	+	.	Parent=FBgn0029814.1.mrna1;Target=FBgn0029814.1 94 223 +
Chr1	stalkie_big_nohaplotig	exon	161644071	161644185	100	+	.	Parent=FBgn0029814.1.mrna1;Target=FBgn0029814.1 224 338 +
Chr1	stalkie_big_nohaplotig	exon	161645120	161645280	100	+	.	Parent=FBgn0029814.1.mrna1;Target=FBgn0029814.1 339 499 +
Chr1	stalkie_big_nohaplotig	exon	161645399	161645538	100	+	.	Parent=FBgn0029814.1.mrna1;Target=FBgn0029814.1 500 639 +
Chr1	stalkie_big_nohaplotig	exon	161645725	161647368	99	+	.	Parent=FBgn0029814.1.mrna1;Target=FBgn0029814.1 640 2283 +
Chr1	stalkie_big_nohaplotig	CDS	161640365	161640494	.	+	0	Parent=FBgn0029814.1.mrna1;Target=FBgn0029814.1 94 223 +
Chr1	stalkie_big_nohaplotig	CDS	161644071	161644185	.	+	2	Parent=FBgn0029814.1.mrna1;Target=FBgn0029814.1 224 338 +
Chr1	stalkie_big_nohaplotig	CDS	161645120	161645280	.	+	1	Parent=FBgn0029814.1.mrna1;Target=FBgn0029814.1 339 499 +
Chr1	stalkie_big_nohaplotig	CDS	161645399	161645538	.	+	2	Parent=FBgn0029814.1.mrna1;Target=FBgn0029814.1 500 639 +
Chr1	stalkie_big_nohaplotig	CDS	161645725	161647368	.	+	0	Parent=FBgn0029814.1.mrna1;Target=FBgn0029814.1 640 2283 +
Chr1	gffcl	locus	161647482	161647896	.	+	.	ID=RLOC_00013184;geneIDs=Dv_FBgn0209596.path2;transcripts=Dv_FBgn0209596.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	161647482	161647896	.	+	.	ID=Dv_FBgn0209596.mrna2;geneID=Dv_FBgn0209596.path2;Name=Dv_FBgn0209596;Dir=indeterminatecoverage=31.2;identity=99.3;matches=412;mismatches=3;indels=0;unknowns=0;Target=Dv_FBgn0209596 1329 915 .;locus=RLOC_00013184
Chr1	stalkie_big_nohaplotig	exon	161647482	161647896	99	+	.	Parent=Dv_FBgn0209596.mrna2
Chr1	gffcl	locus	161692511	161693749	.	-	.	ID=RLOC_00013185;geneIDs=FBgn0052371.2.path1;transcripts=FBgn0052371.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161692511	161693749	.	-	.	ID=FBgn0052371.2.mrna1;geneID=FBgn0052371.2.path1;Name=FBgn0052371.2;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1227;mismatches=12;indels=0;unknowns=0;Target=FBgn0052371.2 1239 1 .;CDS_Target=FBgn0052371.2 1239 34 .;locus=RLOC_00013185
Chr1	stalkie_big_nohaplotig	exon	161692511	161693749	99	-	.	Parent=FBgn0052371.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161692511	161693716	.	-	0	Parent=FBgn0052371.2.mrna1
Chr1	gffcl	locus	161714190	161715981	.	-	.	ID=RLOC_00013186;geneIDs=comp161382_c3_seq1.path2;transcripts=comp161382_c3_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	161714190	161715981	.	-	.	ID=comp161382_c3_seq1.mrna2;geneID=comp161382_c3_seq1.path2;Name=comp161382_c3_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=1776;mismatches=16;indels=11;unknowns=0;Target=comp161382_c3_seq1 1803 1 .;CDS_Target=comp161382_c3_seq1 355 101 .;locus=RLOC_00013186
Chr1	stalkie_big_nohaplotig	exon	161714190	161715981	98	-	.	Parent=comp161382_c3_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	161715638	161715881	.	-	0	Parent=comp161382_c3_seq1.mrna2
Chr1	gffcl	locus	161731703	161735717	.	-	.	ID=RLOC_00013187;geneIDs=FBgn0023508.1.path1,comp154715_c0_seq1.path1;transcripts=FBgn0023508.1.mrna1,comp154715_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161731703	161735717	.	-	.	ID=FBgn0023508.1.mrna1;geneID=FBgn0023508.1.path1;Name=FBgn0023508.1;Dir=sensecoverage=100.0;identity=99.7;matches=2718;mismatches=9;indels=0;unknowns=0;locus=RLOC_00013187
Chr1	stalkie_big_nohaplotig	exon	161731703	161731884	99	-	.	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 2546 2727 +
Chr1	stalkie_big_nohaplotig	exon	161732416	161732640	100	-	.	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 2321 2545 +
Chr1	stalkie_big_nohaplotig	exon	161732705	161732891	100	-	.	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 2134 2320 +
Chr1	stalkie_big_nohaplotig	exon	161733074	161733324	99	-	.	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 1883 2133 +
Chr1	stalkie_big_nohaplotig	exon	161733403	161733682	99	-	.	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 1603 1882 +
Chr1	stalkie_big_nohaplotig	exon	161733749	161733884	100	-	.	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 1467 1602 +
Chr1	stalkie_big_nohaplotig	exon	161733960	161734184	99	-	.	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 1242 1466 +
Chr1	stalkie_big_nohaplotig	exon	161734241	161734579	99	-	.	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 903 1241 +
Chr1	stalkie_big_nohaplotig	exon	161734634	161734807	100	-	.	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 729 902 +
Chr1	stalkie_big_nohaplotig	exon	161734864	161735149	99	-	.	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 443 728 +
Chr1	stalkie_big_nohaplotig	exon	161735214	161735400	100	-	.	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 256 442 +
Chr1	stalkie_big_nohaplotig	exon	161735463	161735717	100	-	.	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 1 255 +
Chr1	stalkie_big_nohaplotig	CDS	161731703	161731884	.	-	2	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 2546 2727 +
Chr1	stalkie_big_nohaplotig	CDS	161732416	161732640	.	-	2	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 2321 2545 +
Chr1	stalkie_big_nohaplotig	CDS	161732705	161732891	.	-	0	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 2134 2320 +
Chr1	stalkie_big_nohaplotig	CDS	161733074	161733324	.	-	2	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 1883 2133 +
Chr1	stalkie_big_nohaplotig	CDS	161733403	161733682	.	-	0	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 1603 1882 +
Chr1	stalkie_big_nohaplotig	CDS	161733749	161733884	.	-	1	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 1467 1602 +
Chr1	stalkie_big_nohaplotig	CDS	161733960	161734184	.	-	1	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 1242 1466 +
Chr1	stalkie_big_nohaplotig	CDS	161734241	161734579	.	-	1	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 903 1241 +
Chr1	stalkie_big_nohaplotig	CDS	161734634	161734807	.	-	1	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 729 902 +
Chr1	stalkie_big_nohaplotig	CDS	161734864	161735149	.	-	2	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 443 728 +
Chr1	stalkie_big_nohaplotig	CDS	161735214	161735400	.	-	0	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 256 442 +
Chr1	stalkie_big_nohaplotig	CDS	161735463	161735717	.	-	0	Parent=FBgn0023508.1.mrna1;Target=FBgn0023508.1 1 255 +
Chr1	stalkie_big_nohaplotig	mRNA	161731863	161732439	.	-	.	ID=comp154715_c0_seq1.mrna1;geneID=comp154715_c0_seq1.path1;Name=comp154715_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=569;mismatches=8;indels=3;unknowns=0;Target=comp154715_c0_seq1 580 1 .;CDS_Target=comp154715_c0_seq1 342 205 .;locus=RLOC_00013187
Chr1	stalkie_big_nohaplotig	exon	161731863	161732439	98	-	.	Parent=comp154715_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161732101	161732235	.	-	0	Parent=comp154715_c0_seq1.mrna1
Chr1	gffcl	locus	161750889	161754418	.	+	.	ID=RLOC_00013188;geneIDs=FBgn0030055.1.path1;transcripts=FBgn0030055.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161750889	161754418	.	+	.	ID=FBgn0030055.1.mrna1;geneID=FBgn0030055.1.path1;Name=FBgn0030055.1;Dir=sensecoverage=100.0;identity=99.3;matches=2683;mismatches=20;indels=0;unknowns=0;locus=RLOC_00013188
Chr1	stalkie_big_nohaplotig	exon	161750889	161750960	95	+	.	Parent=FBgn0030055.1.mrna1;Target=FBgn0030055.1 1 72 +
Chr1	stalkie_big_nohaplotig	exon	161751159	161751722	98	+	.	Parent=FBgn0030055.1.mrna1;Target=FBgn0030055.1 73 636 +
Chr1	stalkie_big_nohaplotig	exon	161751795	161752289	99	+	.	Parent=FBgn0030055.1.mrna1;Target=FBgn0030055.1 637 1131 +
Chr1	stalkie_big_nohaplotig	exon	161752352	161752850	99	+	.	Parent=FBgn0030055.1.mrna1;Target=FBgn0030055.1 1132 1630 +
Chr1	stalkie_big_nohaplotig	exon	161752908	161752969	98	+	.	Parent=FBgn0030055.1.mrna1;Target=FBgn0030055.1 1631 1692 +
Chr1	stalkie_big_nohaplotig	exon	161753158	161753465	98	+	.	Parent=FBgn0030055.1.mrna1;Target=FBgn0030055.1 1693 2000 +
Chr1	stalkie_big_nohaplotig	exon	161753531	161753698	100	+	.	Parent=FBgn0030055.1.mrna1;Target=FBgn0030055.1 2001 2168 +
Chr1	stalkie_big_nohaplotig	exon	161753770	161753967	100	+	.	Parent=FBgn0030055.1.mrna1;Target=FBgn0030055.1 2169 2366 +
Chr1	stalkie_big_nohaplotig	exon	161754023	161754176	100	+	.	Parent=FBgn0030055.1.mrna1;Target=FBgn0030055.1 2367 2520 +
Chr1	stalkie_big_nohaplotig	exon	161754236	161754418	98	+	.	Parent=FBgn0030055.1.mrna1;Target=FBgn0030055.1 2521 2703 +
Chr1	stalkie_big_nohaplotig	CDS	161752224	161752289	.	+	0	Parent=FBgn0030055.1.mrna1;Target=FBgn0030055.1 1066 1131 +
Chr1	stalkie_big_nohaplotig	CDS	161752352	161752850	.	+	0	Parent=FBgn0030055.1.mrna1;Target=FBgn0030055.1 1132 1630 +
Chr1	stalkie_big_nohaplotig	CDS	161752908	161752969	.	+	2	Parent=FBgn0030055.1.mrna1;Target=FBgn0030055.1 1631 1692 +
Chr1	stalkie_big_nohaplotig	CDS	161753158	161753465	.	+	0	Parent=FBgn0030055.1.mrna1;Target=FBgn0030055.1 1693 2000 +
Chr1	stalkie_big_nohaplotig	CDS	161753531	161753698	.	+	1	Parent=FBgn0030055.1.mrna1;Target=FBgn0030055.1 2001 2168 +
Chr1	stalkie_big_nohaplotig	CDS	161753770	161753967	.	+	1	Parent=FBgn0030055.1.mrna1;Target=FBgn0030055.1 2169 2366 +
Chr1	stalkie_big_nohaplotig	CDS	161754023	161754176	.	+	1	Parent=FBgn0030055.1.mrna1;Target=FBgn0030055.1 2367 2520 +
Chr1	stalkie_big_nohaplotig	CDS	161754236	161754418	.	+	0	Parent=FBgn0030055.1.mrna1;Target=FBgn0030055.1 2521 2703 +
Chr1	gffcl	locus	161755639	161758445	.	+	.	ID=RLOC_00013189;geneIDs=FBgn0030554.1.path1;transcripts=FBgn0030554.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161755639	161758445	.	+	.	ID=FBgn0030554.1.mrna1;geneID=FBgn0030554.1.path1;Name=FBgn0030554.1;Dir=sensecoverage=100.0;identity=98.8;matches=1387;mismatches=17;indels=0;unknowns=0;locus=RLOC_00013189
Chr1	stalkie_big_nohaplotig	exon	161755639	161755828	100	+	.	Parent=FBgn0030554.1.mrna1;Target=FBgn0030554.1 1 190 +
Chr1	stalkie_big_nohaplotig	exon	161755890	161756026	97	+	.	Parent=FBgn0030554.1.mrna1;Target=FBgn0030554.1 191 327 +
Chr1	stalkie_big_nohaplotig	exon	161757072	161757235	97	+	.	Parent=FBgn0030554.1.mrna1;Target=FBgn0030554.1 328 491 +
Chr1	stalkie_big_nohaplotig	exon	161757296	161757417	97	+	.	Parent=FBgn0030554.1.mrna1;Target=FBgn0030554.1 492 613 +
Chr1	stalkie_big_nohaplotig	exon	161757478	161757648	99	+	.	Parent=FBgn0030554.1.mrna1;Target=FBgn0030554.1 614 784 +
Chr1	stalkie_big_nohaplotig	exon	161757712	161757877	100	+	.	Parent=FBgn0030554.1.mrna1;Target=FBgn0030554.1 785 950 +
Chr1	stalkie_big_nohaplotig	exon	161757938	161758143	100	+	.	Parent=FBgn0030554.1.mrna1;Target=FBgn0030554.1 951 1156 +
Chr1	stalkie_big_nohaplotig	exon	161758198	161758445	97	+	.	Parent=FBgn0030554.1.mrna1;Target=FBgn0030554.1 1157 1404 +
Chr1	stalkie_big_nohaplotig	CDS	161755639	161755828	.	+	0	Parent=FBgn0030554.1.mrna1;Target=FBgn0030554.1 1 190 +
Chr1	stalkie_big_nohaplotig	CDS	161755890	161756026	.	+	2	Parent=FBgn0030554.1.mrna1;Target=FBgn0030554.1 191 327 +
Chr1	stalkie_big_nohaplotig	CDS	161757072	161757235	.	+	0	Parent=FBgn0030554.1.mrna1;Target=FBgn0030554.1 328 491 +
Chr1	stalkie_big_nohaplotig	CDS	161757296	161757417	.	+	1	Parent=FBgn0030554.1.mrna1;Target=FBgn0030554.1 492 613 +
Chr1	stalkie_big_nohaplotig	CDS	161757478	161757648	.	+	2	Parent=FBgn0030554.1.mrna1;Target=FBgn0030554.1 614 784 +
Chr1	stalkie_big_nohaplotig	CDS	161757712	161757877	.	+	2	Parent=FBgn0030554.1.mrna1;Target=FBgn0030554.1 785 950 +
Chr1	stalkie_big_nohaplotig	CDS	161757938	161758143	.	+	1	Parent=FBgn0030554.1.mrna1;Target=FBgn0030554.1 951 1156 +
Chr1	stalkie_big_nohaplotig	CDS	161758198	161758445	.	+	2	Parent=FBgn0030554.1.mrna1;Target=FBgn0030554.1 1157 1404 +
Chr1	gffcl	locus	161758910	161761365	.	-	.	ID=RLOC_00013190;geneIDs=FBgn0030556.1.path1;transcripts=FBgn0030556.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161758910	161761365	.	-	.	ID=FBgn0030556.1.mrna1;geneID=FBgn0030556.1.path1;Name=FBgn0030556.1;Dir=sensecoverage=100.0;identity=99.7;matches=1896;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013190
Chr1	stalkie_big_nohaplotig	exon	161758910	161759058	100	-	.	Parent=FBgn0030556.1.mrna1;Target=FBgn0030556.1 1754 1902 +
Chr1	stalkie_big_nohaplotig	exon	161759234	161759427	99	-	.	Parent=FBgn0030556.1.mrna1;Target=FBgn0030556.1 1560 1753 +
Chr1	stalkie_big_nohaplotig	exon	161759503	161759603	100	-	.	Parent=FBgn0030556.1.mrna1;Target=FBgn0030556.1 1459 1559 +
Chr1	stalkie_big_nohaplotig	exon	161759660	161759832	98	-	.	Parent=FBgn0030556.1.mrna1;Target=FBgn0030556.1 1286 1458 +
Chr1	stalkie_big_nohaplotig	exon	161759884	161760022	99	-	.	Parent=FBgn0030556.1.mrna1;Target=FBgn0030556.1 1147 1285 +
Chr1	stalkie_big_nohaplotig	exon	161760091	161760226	100	-	.	Parent=FBgn0030556.1.mrna1;Target=FBgn0030556.1 1011 1146 +
Chr1	stalkie_big_nohaplotig	exon	161760295	161761115	99	-	.	Parent=FBgn0030556.1.mrna1;Target=FBgn0030556.1 190 1010 +
Chr1	stalkie_big_nohaplotig	exon	161761177	161761365	100	-	.	Parent=FBgn0030556.1.mrna1;Target=FBgn0030556.1 1 189 +
Chr1	stalkie_big_nohaplotig	CDS	161758910	161759058	.	-	2	Parent=FBgn0030556.1.mrna1;Target=FBgn0030556.1 1754 1902 +
Chr1	stalkie_big_nohaplotig	CDS	161759234	161759427	.	-	1	Parent=FBgn0030556.1.mrna1;Target=FBgn0030556.1 1560 1753 +
Chr1	stalkie_big_nohaplotig	CDS	161759503	161759603	.	-	0	Parent=FBgn0030556.1.mrna1;Target=FBgn0030556.1 1459 1559 +
Chr1	stalkie_big_nohaplotig	CDS	161759660	161759832	.	-	2	Parent=FBgn0030556.1.mrna1;Target=FBgn0030556.1 1286 1458 +
Chr1	stalkie_big_nohaplotig	CDS	161759884	161760022	.	-	0	Parent=FBgn0030556.1.mrna1;Target=FBgn0030556.1 1147 1285 +
Chr1	stalkie_big_nohaplotig	CDS	161760091	161760226	.	-	1	Parent=FBgn0030556.1.mrna1;Target=FBgn0030556.1 1011 1146 +
Chr1	stalkie_big_nohaplotig	CDS	161760295	161761115	.	-	0	Parent=FBgn0030556.1.mrna1;Target=FBgn0030556.1 190 1010 +
Chr1	stalkie_big_nohaplotig	CDS	161761177	161761365	.	-	0	Parent=FBgn0030556.1.mrna1;Target=FBgn0030556.1 1 189 +
Chr1	gffcl	locus	161762185	161772355	.	+	.	ID=RLOC_00013191;geneIDs=FBgn0260482.1.path1,comp155820_c2_seq1.path1;transcripts=comp155820_c2_seq1.mrna1,FBgn0260482.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161762185	161772355	.	+	.	ID=comp155820_c2_seq1.mrna1;geneID=comp155820_c2_seq1.path1;Name=comp155820_c2_seq1;Dir=sensecoverage=88.7;identity=96.8;matches=1195;mismatches=17;indels=23;unknowns=0;locus=RLOC_00013191
Chr1	stalkie_big_nohaplotig	exon	161762185	161762439	86	+	.	Parent=comp155820_c2_seq1.mrna1;Target=comp155820_c2_seq1 159 436 +
Chr1	stalkie_big_nohaplotig	exon	161769746	161769852	100	+	.	Parent=comp155820_c2_seq1.mrna1;Target=comp155820_c2_seq1 437 543 +
Chr1	stalkie_big_nohaplotig	exon	161771436	161771523	100	+	.	Parent=comp155820_c2_seq1.mrna1;Target=comp155820_c2_seq1 544 631 +
Chr1	stalkie_big_nohaplotig	exon	161771594	161772355	99	+	.	Parent=comp155820_c2_seq1.mrna1;Target=comp155820_c2_seq1 632 1393 +
Chr1	stalkie_big_nohaplotig	CDS	161771458	161771523	.	+	0	Parent=comp155820_c2_seq1.mrna1;Target=comp155820_c2_seq1 566 631 +
Chr1	stalkie_big_nohaplotig	CDS	161771594	161772118	.	+	0	Parent=comp155820_c2_seq1.mrna1;Target=comp155820_c2_seq1 632 1156 +
Chr1	stalkie_big_nohaplotig	mRNA	161764164	161772115	.	+	.	ID=FBgn0260482.1.mrna1;geneID=FBgn0260482.1.path1;Name=FBgn0260482.1;Dir=sensecoverage=100.0;identity=99.7;matches=873;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013191
Chr1	stalkie_big_nohaplotig	exon	161764164	161764322	99	+	.	Parent=FBgn0260482.1.mrna1;Target=FBgn0260482.1 1 159 +
Chr1	stalkie_big_nohaplotig	exon	161769746	161769852	100	+	.	Parent=FBgn0260482.1.mrna1;Target=FBgn0260482.1 160 266 +
Chr1	stalkie_big_nohaplotig	exon	161771436	161771523	100	+	.	Parent=FBgn0260482.1.mrna1;Target=FBgn0260482.1 267 354 +
Chr1	stalkie_big_nohaplotig	exon	161771594	161772115	99	+	.	Parent=FBgn0260482.1.mrna1;Target=FBgn0260482.1 355 876 +
Chr1	stalkie_big_nohaplotig	CDS	161764164	161764322	.	+	0	Parent=FBgn0260482.1.mrna1;Target=FBgn0260482.1 1 159 +
Chr1	stalkie_big_nohaplotig	CDS	161769746	161769852	.	+	0	Parent=FBgn0260482.1.mrna1;Target=FBgn0260482.1 160 266 +
Chr1	stalkie_big_nohaplotig	CDS	161771436	161771523	.	+	1	Parent=FBgn0260482.1.mrna1;Target=FBgn0260482.1 267 354 +
Chr1	stalkie_big_nohaplotig	CDS	161771594	161772115	.	+	0	Parent=FBgn0260482.1.mrna1;Target=FBgn0260482.1 355 876 +
Chr1	gffcl	locus	161843871	161844557	.	+	.	ID=RLOC_00013193;geneIDs=comp158073_c0_seq1.path1;transcripts=comp158073_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161843871	161844557	.	+	.	ID=comp158073_c0_seq1.mrna1;geneID=comp158073_c0_seq1.path1;Name=comp158073_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=676;mismatches=11;indels=2;unknowns=0;Target=comp158073_c0_seq1 689 1 .;CDS_Target=comp158073_c0_seq1 518 192 .;locus=RLOC_00013193
Chr1	stalkie_big_nohaplotig	exon	161843871	161844557	98	+	.	Parent=comp158073_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161844060	161844386	.	+	0	Parent=comp158073_c0_seq1.mrna1
Chr1	gffcl	locus	161849483	161850189	.	-	.	ID=RLOC_00013194;geneIDs=comp152616_c0_seq1.path1;transcripts=comp152616_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161849483	161850189	.	-	.	ID=comp152616_c0_seq1.mrna1;geneID=comp152616_c0_seq1.path1;Name=comp152616_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.6;matches=697;mismatches=10;indels=0;unknowns=0;Target=comp152616_c0_seq1 707 1 .;CDS_Target=comp152616_c0_seq1 173 138 .;locus=RLOC_00013194
Chr1	stalkie_big_nohaplotig	exon	161849483	161850189	98	-	.	Parent=comp152616_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161850017	161850052	.	-	0	Parent=comp152616_c0_seq1.mrna1
Chr1	gffcl	locus	161850523	161851042	.	+	.	ID=RLOC_00013195;geneIDs=FBgn0034534.1.path1;transcripts=FBgn0034534.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161850523	161851042	.	+	.	ID=FBgn0034534.1.mrna1;geneID=FBgn0034534.1.path1;Name=FBgn0034534.1;Dir=sensecoverage=94.4;identity=98.7;matches=383;mismatches=5;indels=0;unknowns=0;locus=RLOC_00013195
Chr1	stalkie_big_nohaplotig	exon	161850523	161850547	100	+	.	Parent=FBgn0034534.1.mrna1;Target=FBgn0034534.1 24 48 +
Chr1	stalkie_big_nohaplotig	exon	161850680	161851042	98	+	.	Parent=FBgn0034534.1.mrna1;Target=FBgn0034534.1 49 411 +
Chr1	stalkie_big_nohaplotig	CDS	161850524	161850547	.	+	0	Parent=FBgn0034534.1.mrna1;Target=FBgn0034534.1 25 48 +
Chr1	stalkie_big_nohaplotig	CDS	161850680	161851042	.	+	0	Parent=FBgn0034534.1.mrna1;Target=FBgn0034534.1 49 411 +
Chr1	gffcl	locus	161852401	161853376	.	+	.	ID=RLOC_00013196;geneIDs=FBgn0030806.1.path1;transcripts=FBgn0030806.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161852401	161853376	.	+	.	ID=FBgn0030806.1.mrna1;geneID=FBgn0030806.1.path1;Name=FBgn0030806.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=976;mismatches=0;indels=2;unknowns=0;Target=FBgn0030806.1 978 1 .;CDS_Target=FBgn0030806.1 978 58 .;locus=RLOC_00013196
Chr1	stalkie_big_nohaplotig	exon	161852401	161853376	99	+	.	Parent=FBgn0030806.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161852457	161853376	.	+	0	Parent=FBgn0030806.1.mrna1
Chr1	gffcl	locus	161857367	161857671	.	-	.	ID=RLOC_00013197;geneIDs=comp149710_c1_seq1.path1;transcripts=comp149710_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161857367	161857671	.	-	.	ID=comp149710_c1_seq1.mrna1;geneID=comp149710_c1_seq1.path1;Name=comp149710_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=299;mismatches=6;indels=0;unknowns=0;Target=comp149710_c1_seq1 305 1 .;CDS_Target=comp149710_c1_seq1 45 1 .;locus=RLOC_00013197
Chr1	stalkie_big_nohaplotig	exon	161857367	161857671	98	-	.	Parent=comp149710_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161857627	161857671	.	-	0	Parent=comp149710_c1_seq1.mrna1
Chr1	gffcl	locus	161863195	161864659	.	+	.	ID=RLOC_00013198;geneIDs=FBgn0030805.1.path1;transcripts=FBgn0030805.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161863195	161864659	.	+	.	ID=FBgn0030805.1.mrna1;geneID=FBgn0030805.1.path1;Name=FBgn0030805.1;Dir=sensecoverage=100.0;identity=98.9;matches=1231;mismatches=14;indels=0;unknowns=0;locus=RLOC_00013198
Chr1	stalkie_big_nohaplotig	exon	161863195	161863258	100	+	.	Parent=FBgn0030805.1.mrna1;Target=FBgn0030805.1 1 64 +
Chr1	stalkie_big_nohaplotig	exon	161863479	161864659	98	+	.	Parent=FBgn0030805.1.mrna1;Target=FBgn0030805.1 65 1245 +
Chr1	stalkie_big_nohaplotig	CDS	161863195	161863258	.	+	0	Parent=FBgn0030805.1.mrna1;Target=FBgn0030805.1 1 64 +
Chr1	stalkie_big_nohaplotig	CDS	161863479	161864659	.	+	2	Parent=FBgn0030805.1.mrna1;Target=FBgn0030805.1 65 1245 +
Chr1	gffcl	locus	161865246	161866071	.	-	.	ID=RLOC_00013199;geneIDs=comp148330_c0_seq1.path1;transcripts=comp148330_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161865246	161866071	.	-	.	ID=comp148330_c0_seq1.mrna1;geneID=comp148330_c0_seq1.path1;Name=comp148330_c0_seq1;Dir=indeterminatecoverage=96.0;identity=98.1;matches=814;mismatches=12;indels=4;unknowns=0;Target=comp148330_c0_seq1 830 1 .;CDS_Target=comp148330_c0_seq1 133 38 .;locus=RLOC_00013199
Chr1	stalkie_big_nohaplotig	exon	161865246	161866071	98	-	.	Parent=comp148330_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161865939	161866034	.	-	0	Parent=comp148330_c0_seq1.mrna1
Chr1	gffcl	locus	161866219	161866864	.	-	.	ID=RLOC_00013200;geneIDs=comp147076_c0_seq1.path1;transcripts=comp147076_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161866219	161866864	.	-	.	ID=comp147076_c0_seq1.mrna1;geneID=comp147076_c0_seq1.path1;Name=comp147076_c0_seq1;Dir=indeterminatecoverage=97.0;identity=99.7;matches=644;mismatches=2;indels=0;unknowns=0;Target=comp147076_c0_seq1 666 21 .;CDS_Target=comp147076_c0_seq1 490 365 .;locus=RLOC_00013200
Chr1	stalkie_big_nohaplotig	exon	161866219	161866864	99	-	.	Parent=comp147076_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161866395	161866520	.	-	0	Parent=comp147076_c0_seq1.mrna1
Chr1	gffcl	locus	161869713	161870662	.	+	.	ID=RLOC_00013201;geneIDs=comp154437_c0_seq1.path1;transcripts=comp154437_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161869713	161870662	.	+	.	ID=comp154437_c0_seq1.mrna1;geneID=comp154437_c0_seq1.path1;Name=comp154437_c0_seq1;Dir=indeterminatecoverage=98.1;identity=98.4;matches=939;mismatches=3;indels=12;unknowns=0;Target=comp154437_c0_seq1 964 19 .;CDS_Target=comp154437_c0_seq1 961 758 .;locus=RLOC_00013201
Chr1	stalkie_big_nohaplotig	exon	161869713	161870662	98	+	.	Parent=comp154437_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161870448	161870659	.	+	0	Parent=comp154437_c0_seq1.mrna1
Chr1	gffcl	locus	161870930	161879614	.	-	.	ID=RLOC_00013202;geneIDs=FBgn0027556.1.path1;transcripts=FBgn0027556.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161870930	161879614	.	-	.	ID=FBgn0027556.1.mrna1;geneID=FBgn0027556.1.path1;Name=FBgn0027556.1;Dir=sensecoverage=100.0;identity=99.5;matches=1594;mismatches=8;indels=0;unknowns=0;locus=RLOC_00013202
Chr1	stalkie_big_nohaplotig	exon	161870930	161871079	100	-	.	Parent=FBgn0027556.1.mrna1;Target=FBgn0027556.1 1453 1602 +
Chr1	stalkie_big_nohaplotig	exon	161871140	161871990	99	-	.	Parent=FBgn0027556.1.mrna1;Target=FBgn0027556.1 602 1452 +
Chr1	stalkie_big_nohaplotig	exon	161872053	161872261	99	-	.	Parent=FBgn0027556.1.mrna1;Target=FBgn0027556.1 393 601 +
Chr1	stalkie_big_nohaplotig	exon	161872326	161872522	100	-	.	Parent=FBgn0027556.1.mrna1;Target=FBgn0027556.1 196 392 +
Chr1	stalkie_big_nohaplotig	exon	161872640	161872771	100	-	.	Parent=FBgn0027556.1.mrna1;Target=FBgn0027556.1 64 195 +
Chr1	stalkie_big_nohaplotig	exon	161879552	161879614	100	-	.	Parent=FBgn0027556.1.mrna1;Target=FBgn0027556.1 1 63 +
Chr1	stalkie_big_nohaplotig	CDS	161870930	161871079	.	-	0	Parent=FBgn0027556.1.mrna1;Target=FBgn0027556.1 1453 1602 +
Chr1	stalkie_big_nohaplotig	CDS	161871140	161871990	.	-	2	Parent=FBgn0027556.1.mrna1;Target=FBgn0027556.1 602 1452 +
Chr1	stalkie_big_nohaplotig	CDS	161872053	161872261	.	-	1	Parent=FBgn0027556.1.mrna1;Target=FBgn0027556.1 393 601 +
Chr1	stalkie_big_nohaplotig	CDS	161872326	161872522	.	-	0	Parent=FBgn0027556.1.mrna1;Target=FBgn0027556.1 196 392 +
Chr1	stalkie_big_nohaplotig	CDS	161872640	161872771	.	-	0	Parent=FBgn0027556.1.mrna1;Target=FBgn0027556.1 64 195 +
Chr1	stalkie_big_nohaplotig	CDS	161879552	161879614	.	-	0	Parent=FBgn0027556.1.mrna1;Target=FBgn0027556.1 1 63 +
Chr1	gffcl	locus	161879645	161886069	.	-	.	ID=RLOC_00013203;geneIDs=comp48946_c0_seq1.path1;transcripts=comp48946_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161879645	161886069	.	-	.	ID=comp48946_c0_seq1.mrna1;geneID=comp48946_c0_seq1.path1;Name=comp48946_c0_seq1;Dir=antisensecoverage=98.6;identity=99.4;matches=480;mismatches=0;indels=3;unknowns=0;Target=comp48946_c0_seq1 192 281 .;locus=RLOC_00013203
Chr1	stalkie_big_nohaplotig	exon	161879645	161879670	92	-	.	Parent=comp48946_c0_seq1.mrna1;Target=comp48946_c0_seq1 1 24 -
Chr1	stalkie_big_nohaplotig	exon	161885613	161886069	99	-	.	Parent=comp48946_c0_seq1.mrna1;Target=comp48946_c0_seq1 25 480 -
Chr1	stalkie_big_nohaplotig	CDS	161885780	161885869	.	-	0	Parent=comp48946_c0_seq1.mrna1
Chr1	gffcl	locus	161930960	161931261	.	-	.	ID=RLOC_00013204;geneIDs=comp1426593_c0_seq1.path1;transcripts=comp1426593_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161930960	161931261	.	-	.	ID=comp1426593_c0_seq1.mrna1;geneID=comp1426593_c0_seq1.path1;Name=comp1426593_c0_seq1;Dir=indeterminatecoverage=97.1;identity=99.7;matches=301;mismatches=1;indels=0;unknowns=0;Target=comp1426593_c0_seq1 311 10 .;CDS_Target=comp1426593_c0_seq1 309 247 .;locus=RLOC_00013204
Chr1	stalkie_big_nohaplotig	exon	161930960	161931261	99	-	.	Parent=comp1426593_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161930962	161931024	.	-	0	Parent=comp1426593_c0_seq1.mrna1
Chr1	gffcl	locus	161942248	161942864	.	-	.	ID=RLOC_00013205;geneIDs=FBgn0030804.1.path1;transcripts=FBgn0030804.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161942248	161942864	.	-	.	ID=FBgn0030804.1.mrna1;geneID=FBgn0030804.1.path1;Name=FBgn0030804.1;Dir=sensecoverage=97.7;identity=99.4;matches=469;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013205
Chr1	stalkie_big_nohaplotig	exon	161942248	161942280	100	-	.	Parent=FBgn0030804.1.mrna1;Target=FBgn0030804.1 451 483 +
Chr1	stalkie_big_nohaplotig	exon	161942365	161942730	99	-	.	Parent=FBgn0030804.1.mrna1;Target=FBgn0030804.1 85 450 +
Chr1	stalkie_big_nohaplotig	exon	161942792	161942864	98	-	.	Parent=FBgn0030804.1.mrna1;Target=FBgn0030804.1 12 84 +
Chr1	stalkie_big_nohaplotig	CDS	161942248	161942280	.	-	0	Parent=FBgn0030804.1.mrna1;Target=FBgn0030804.1 451 483 +
Chr1	stalkie_big_nohaplotig	CDS	161942365	161942730	.	-	0	Parent=FBgn0030804.1.mrna1;Target=FBgn0030804.1 85 450 +
Chr1	stalkie_big_nohaplotig	CDS	161942792	161942845	.	-	0	Parent=FBgn0030804.1.mrna1;Target=FBgn0030804.1 31 84 +
Chr1	gffcl	locus	161945976	161946265	.	+	.	ID=RLOC_00013206;geneIDs=FBgn0014391.1.path1;transcripts=FBgn0014391.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161945976	161946265	.	+	.	ID=FBgn0014391.1.mrna1;geneID=FBgn0014391.1.path1;Name=FBgn0014391.1;Dir=sensecoverage=95.6;identity=100.0;matches=175;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013206
Chr1	stalkie_big_nohaplotig	exon	161945976	161946019	100	+	.	Parent=FBgn0014391.1.mrna1;Target=FBgn0014391.1 1 44 +
Chr1	stalkie_big_nohaplotig	exon	161946135	161946265	100	+	.	Parent=FBgn0014391.1.mrna1;Target=FBgn0014391.1 45 175 +
Chr1	stalkie_big_nohaplotig	CDS	161945976	161946019	.	+	0	Parent=FBgn0014391.1.mrna1;Target=FBgn0014391.1 1 44 +
Chr1	stalkie_big_nohaplotig	CDS	161946135	161946264	.	+	1	Parent=FBgn0014391.1.mrna1;Target=FBgn0014391.1 45 174 +
Chr1	gffcl	locus	161946479	161946778	.	+	.	ID=RLOC_00013207;geneIDs=comp118253_c1_seq1.path1;transcripts=comp118253_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161946479	161946778	.	+	.	ID=comp118253_c1_seq1.mrna1;geneID=comp118253_c1_seq1.path1;Name=comp118253_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=298;mismatches=2;indels=0;unknowns=0;Target=comp118253_c1_seq1 300 1 .;CDS_Target=comp118253_c1_seq1 125 3 .;locus=RLOC_00013207
Chr1	stalkie_big_nohaplotig	exon	161946479	161946778	99	+	.	Parent=comp118253_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161946481	161946603	.	+	0	Parent=comp118253_c1_seq1.mrna1
Chr1	gffcl	locus	161947461	161948782	.	-	.	ID=RLOC_00013208;geneIDs=FBgn0030695.1.path1;transcripts=FBgn0030695.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161947461	161948782	.	-	.	ID=FBgn0030695.1.mrna1;geneID=FBgn0030695.1.path1;Name=FBgn0030695.1;Dir=sensecoverage=100.0;identity=99.9;matches=1013;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013208
Chr1	stalkie_big_nohaplotig	exon	161947461	161947599	100	-	.	Parent=FBgn0030695.1.mrna1;Target=FBgn0030695.1 876 1014 +
Chr1	stalkie_big_nohaplotig	exon	161947661	161947875	100	-	.	Parent=FBgn0030695.1.mrna1;Target=FBgn0030695.1 661 875 +
Chr1	stalkie_big_nohaplotig	exon	161947938	161948002	100	-	.	Parent=FBgn0030695.1.mrna1;Target=FBgn0030695.1 596 660 +
Chr1	stalkie_big_nohaplotig	exon	161948069	161948182	100	-	.	Parent=FBgn0030695.1.mrna1;Target=FBgn0030695.1 482 595 +
Chr1	stalkie_big_nohaplotig	exon	161948240	161948476	100	-	.	Parent=FBgn0030695.1.mrna1;Target=FBgn0030695.1 245 481 +
Chr1	stalkie_big_nohaplotig	exon	161948539	161948782	99	-	.	Parent=FBgn0030695.1.mrna1;Target=FBgn0030695.1 1 244 +
Chr1	stalkie_big_nohaplotig	CDS	161947461	161947599	.	-	1	Parent=FBgn0030695.1.mrna1;Target=FBgn0030695.1 876 1014 +
Chr1	stalkie_big_nohaplotig	CDS	161947661	161947875	.	-	0	Parent=FBgn0030695.1.mrna1;Target=FBgn0030695.1 661 875 +
Chr1	stalkie_big_nohaplotig	CDS	161947938	161948002	.	-	2	Parent=FBgn0030695.1.mrna1;Target=FBgn0030695.1 596 660 +
Chr1	stalkie_big_nohaplotig	CDS	161948069	161948182	.	-	2	Parent=FBgn0030695.1.mrna1;Target=FBgn0030695.1 482 595 +
Chr1	stalkie_big_nohaplotig	CDS	161948240	161948476	.	-	2	Parent=FBgn0030695.1.mrna1;Target=FBgn0030695.1 245 481 +
Chr1	stalkie_big_nohaplotig	CDS	161948539	161948782	.	-	0	Parent=FBgn0030695.1.mrna1;Target=FBgn0030695.1 1 244 +
Chr1	gffcl	locus	161949557	161950932	.	+	.	ID=RLOC_00013209;geneIDs=FBgn0001974.1.path1;transcripts=FBgn0001974.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161949557	161950932	.	+	.	ID=FBgn0001974.1.mrna1;geneID=FBgn0001974.1.path1;Name=FBgn0001974.1;Dir=sensecoverage=100.0;identity=99.9;matches=1217;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013209
Chr1	stalkie_big_nohaplotig	exon	161949557	161949927	100	+	.	Parent=FBgn0001974.1.mrna1;Target=FBgn0001974.1 1 371 +
Chr1	stalkie_big_nohaplotig	exon	161949980	161950599	99	+	.	Parent=FBgn0001974.1.mrna1;Target=FBgn0001974.1 372 991 +
Chr1	stalkie_big_nohaplotig	exon	161950651	161950800	100	+	.	Parent=FBgn0001974.1.mrna1;Target=FBgn0001974.1 992 1141 +
Chr1	stalkie_big_nohaplotig	exon	161950856	161950932	100	+	.	Parent=FBgn0001974.1.mrna1;Target=FBgn0001974.1 1142 1218 +
Chr1	stalkie_big_nohaplotig	CDS	161949557	161949927	.	+	0	Parent=FBgn0001974.1.mrna1;Target=FBgn0001974.1 1 371 +
Chr1	stalkie_big_nohaplotig	CDS	161949980	161950599	.	+	1	Parent=FBgn0001974.1.mrna1;Target=FBgn0001974.1 372 991 +
Chr1	stalkie_big_nohaplotig	CDS	161950651	161950800	.	+	2	Parent=FBgn0001974.1.mrna1;Target=FBgn0001974.1 992 1141 +
Chr1	stalkie_big_nohaplotig	CDS	161950856	161950932	.	+	2	Parent=FBgn0001974.1.mrna1;Target=FBgn0001974.1 1142 1218 +
Chr1	gffcl	locus	161951543	161953708	.	-	.	ID=RLOC_00013210;geneIDs=FBgn0022069.1.path1;transcripts=FBgn0022069.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161951543	161953708	.	-	.	ID=FBgn0022069.1.mrna1;geneID=FBgn0022069.1.path1;Name=FBgn0022069.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=2156;mismatches=10;indels=0;unknowns=0;Target=FBgn0022069.1 2166 1 .;locus=RLOC_00013210
Chr1	stalkie_big_nohaplotig	exon	161951543	161953708	99	-	.	Parent=FBgn0022069.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161951543	161953708	.	-	0	Parent=FBgn0022069.1.mrna1
Chr1	gffcl	locus	161955557	161956678	.	+	.	ID=RLOC_00013211;geneIDs=FBgn0051852.1.path1;transcripts=FBgn0051852.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161955557	161956678	.	+	.	ID=FBgn0051852.1.mrna1;geneID=FBgn0051852.1.path1;Name=FBgn0051852.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1122;mismatches=0;indels=0;unknowns=0;Target=FBgn0051852.1 1122 1 .;locus=RLOC_00013211
Chr1	stalkie_big_nohaplotig	exon	161955557	161956678	100	+	.	Parent=FBgn0051852.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161955557	161956678	.	+	0	Parent=FBgn0051852.1.mrna1
Chr1	gffcl	locus	161957693	161960174	.	-	.	ID=RLOC_00013212;geneIDs=FBgn0030034.1.path1;transcripts=FBgn0030034.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161957693	161960174	.	-	.	ID=FBgn0030034.1.mrna1;geneID=FBgn0030034.1.path1;Name=FBgn0030034.1;Dir=sensecoverage=100.0;identity=100.0;matches=2276;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013212
Chr1	stalkie_big_nohaplotig	exon	161957693	161959023	99	-	.	Parent=FBgn0030034.1.mrna1;Target=FBgn0030034.1 947 2277 +
Chr1	stalkie_big_nohaplotig	exon	161959126	161959474	100	-	.	Parent=FBgn0030034.1.mrna1;Target=FBgn0030034.1 598 946 +
Chr1	stalkie_big_nohaplotig	exon	161959578	161960174	100	-	.	Parent=FBgn0030034.1.mrna1;Target=FBgn0030034.1 1 597 +
Chr1	stalkie_big_nohaplotig	CDS	161957693	161959023	.	-	2	Parent=FBgn0030034.1.mrna1;Target=FBgn0030034.1 947 2277 +
Chr1	stalkie_big_nohaplotig	CDS	161959126	161959474	.	-	0	Parent=FBgn0030034.1.mrna1;Target=FBgn0030034.1 598 946 +
Chr1	stalkie_big_nohaplotig	CDS	161959578	161960174	.	-	0	Parent=FBgn0030034.1.mrna1;Target=FBgn0030034.1 1 597 +
Chr1	gffcl	locus	161960564	161961573	.	+	.	ID=RLOC_00013213;geneIDs=comp143212_c0_seq1.path1;transcripts=comp143212_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161960564	161961573	.	+	.	ID=comp143212_c0_seq1.mrna1;geneID=comp143212_c0_seq1.path1;Name=comp143212_c0_seq1;Dir=antisensecoverage=97.9;identity=99.4;matches=950;mismatches=6;indels=0;unknowns=0;Target=comp143212_c0_seq1 319 639 .;locus=RLOC_00013213
Chr1	stalkie_big_nohaplotig	exon	161960564	161960876	98	+	.	Parent=comp143212_c0_seq1.mrna1;Target=comp143212_c0_seq1 644 956 -
Chr1	stalkie_big_nohaplotig	exon	161960931	161961573	99	+	.	Parent=comp143212_c0_seq1.mrna1;Target=comp143212_c0_seq1 1 643 -
Chr1	stalkie_big_nohaplotig	CDS	161960935	161961255	.	+	0	Parent=comp143212_c0_seq1.mrna1
Chr1	gffcl	locus	161981087	161981655	.	-	.	ID=RLOC_00013214;geneIDs=comp135623_c0_seq1.path1;transcripts=comp135623_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161981087	161981655	.	-	.	ID=comp135623_c0_seq1.mrna1;geneID=comp135623_c0_seq1.path1;Name=comp135623_c0_seq1;Dir=indeterminatecoverage=95.8;identity=99.6;matches=568;mismatches=1;indels=1;unknowns=0;Target=comp135623_c0_seq1 595 26 .;CDS_Target=comp135623_c0_seq1 357 241 .;locus=RLOC_00013214
Chr1	stalkie_big_nohaplotig	exon	161981087	161981655	99	-	.	Parent=comp135623_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	161981325	161981440	.	-	0	Parent=comp135623_c0_seq1.mrna1
Chr1	gffcl	locus	161985312	161990871	.	+	.	ID=RLOC_00013216;geneIDs=comp152653_c0_seq1.path1;transcripts=comp152653_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	161985312	161990871	.	+	.	ID=comp152653_c0_seq1.mrna1;geneID=comp152653_c0_seq1.path1;Name=comp152653_c0_seq1;Dir=sensecoverage=98.7;identity=97.8;matches=670;mismatches=14;indels=1;unknowns=0;Target=comp152653_c0_seq1 356 472 +;locus=RLOC_00013216
Chr1	stalkie_big_nohaplotig	exon	161985312	161985419	100	+	.	Parent=comp152653_c0_seq1.mrna1;Target=comp152653_c0_seq1 10 117 +
Chr1	stalkie_big_nohaplotig	exon	161990296	161990871	97	+	.	Parent=comp152653_c0_seq1.mrna1;Target=comp152653_c0_seq1 118 694 +
Chr1	stalkie_big_nohaplotig	CDS	161990533	161990649	.	+	0	Parent=comp152653_c0_seq1.mrna1
Chr1	gffcl	locus	162035035	162035706	.	+	.	ID=RLOC_00013217;geneIDs=comp112380_c0_seq1.path1,comp149475_c0_seq1.path1;transcripts=comp149475_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162035035	162035454	.	+	.	ID=comp149475_c0_seq1.mrna1;geneID=comp149475_c0_seq1.path1;Name=comp149475_c0_seq1;Dir=antisensecoverage=100.0;identity=98.1;matches=357;mismatches=7;indels=0;unknowns=0;Target=comp149475_c0_seq1 274 363 .;locus=RLOC_00013217
Chr1	stalkie_big_nohaplotig	exon	162035035	162035201	98	+	.	Parent=comp149475_c0_seq1.mrna1;Target=comp149475_c0_seq1 198 364 -
Chr1	stalkie_big_nohaplotig	exon	162035258	162035454	97	+	.	Parent=comp149475_c0_seq1.mrna1;Target=comp149475_c0_seq1 1 197 -
Chr1	stalkie_big_nohaplotig	CDS	162035036	162035125	.	+	0	Parent=comp149475_c0_seq1.mrna1
Chr1	gffcl	locus	162061619	162062526	.	-	.	ID=RLOC_00013218;geneIDs=ORF2145.path1;transcripts=ORF2145.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162061619	162062526	.	-	.	ID=ORF2145.mrna1;geneID=ORF2145.path1;Name=ORF2145;Dir=indeterminatecoverage=100.0;identity=98.3;matches=894;mismatches=14;indels=1;unknowns=0;Target=ORF2145 909 1 .;CDS_Target=ORF2145 23 3 .;locus=RLOC_00013218
Chr1	stalkie_big_nohaplotig	exon	162061619	162062526	98	-	.	Parent=ORF2145.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162062505	162062524	.	-	0	Parent=ORF2145.mrna1
Chr1	gffcl	locus	162092540	162094090	.	-	.	ID=RLOC_00013219;geneIDs=FBgn0036078.1.path1;transcripts=FBgn0036078.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162092540	162094090	.	-	.	ID=FBgn0036078.1.mrna1;geneID=FBgn0036078.1.path1;Name=FBgn0036078.1;Dir=sensecoverage=100.0;identity=99.3;matches=1019;mismatches=7;indels=0;unknowns=0;locus=RLOC_00013219
Chr1	stalkie_big_nohaplotig	exon	162092540	162092680	99	-	.	Parent=FBgn0036078.1.mrna1;Target=FBgn0036078.1 886 1026 +
Chr1	stalkie_big_nohaplotig	exon	162093134	162093332	98	-	.	Parent=FBgn0036078.1.mrna1;Target=FBgn0036078.1 687 885 +
Chr1	stalkie_big_nohaplotig	exon	162093405	162094090	99	-	.	Parent=FBgn0036078.1.mrna1;Target=FBgn0036078.1 1 686 +
Chr1	stalkie_big_nohaplotig	CDS	162092540	162092680	.	-	0	Parent=FBgn0036078.1.mrna1;Target=FBgn0036078.1 886 1026 +
Chr1	stalkie_big_nohaplotig	CDS	162093134	162093332	.	-	1	Parent=FBgn0036078.1.mrna1;Target=FBgn0036078.1 687 885 +
Chr1	stalkie_big_nohaplotig	CDS	162093405	162094090	.	-	0	Parent=FBgn0036078.1.mrna1;Target=FBgn0036078.1 1 686 +
Chr1	gffcl	locus	162117094	162118225	.	+	.	ID=RLOC_00013220;geneIDs=ORF1816.path1;transcripts=ORF1816.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162117094	162118225	.	+	.	ID=ORF1816.mrna1;geneID=ORF1816.path1;Name=ORF1816;Dir=sensecoverage=98.2;identity=98.8;matches=960;mismatches=12;indels=0;unknowns=0;locus=RLOC_00013220
Chr1	stalkie_big_nohaplotig	exon	162117094	162117273	99	+	.	Parent=ORF1816.mrna1;Target=ORF1816 19 198 +
Chr1	stalkie_big_nohaplotig	exon	162117353	162117897	99	+	.	Parent=ORF1816.mrna1;Target=ORF1816 199 743 +
Chr1	stalkie_big_nohaplotig	exon	162117979	162118225	97	+	.	Parent=ORF1816.mrna1;Target=ORF1816 744 990 +
Chr1	stalkie_big_nohaplotig	CDS	162117094	162117273	.	+	0	Parent=ORF1816.mrna1;Target=ORF1816 19 198 +
Chr1	stalkie_big_nohaplotig	CDS	162117353	162117897	.	+	0	Parent=ORF1816.mrna1;Target=ORF1816 199 743 +
Chr1	stalkie_big_nohaplotig	CDS	162117979	162118225	.	+	1	Parent=ORF1816.mrna1;Target=ORF1816 744 990 +
Chr1	gffcl	locus	162146398	162149412	.	+	.	ID=RLOC_00013221;geneIDs=ORF112.path1;transcripts=ORF112.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162146398	162149412	.	+	.	ID=ORF112.mrna1;geneID=ORF112.path1;Name=ORF112;Dir=indeterminatecoverage=100.0;identity=99.3;matches=2993;mismatches=22;indels=0;unknowns=0;Target=ORF112 3015 1 .;locus=RLOC_00013221
Chr1	stalkie_big_nohaplotig	exon	162146398	162149412	99	+	.	Parent=ORF112.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162146398	162149412	.	+	0	Parent=ORF112.mrna1
Chr1	gffcl	locus	162177178	162177985	.	-	.	ID=RLOC_00013223;geneIDs=comp156996_c0_seq1.path1;transcripts=comp156996_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162177178	162177985	.	-	.	ID=comp156996_c0_seq1.mrna1;geneID=comp156996_c0_seq1.path1;Name=comp156996_c0_seq1;Dir=indeterminatecoverage=98.2;identity=93.5;matches=797;mismatches=10;indels=45;unknowns=0;Target=comp156996_c0_seq1 851 1 .;CDS_Target=comp156996_c0_seq1 375 235 .;locus=RLOC_00013223
Chr1	stalkie_big_nohaplotig	exon	162177178	162177985	93	-	.	Parent=comp156996_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162177652	162177792	.	-	0	Parent=comp156996_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163807085	163859143	.	+	.	ID=comp160389_c0_seq1.mrna2;geneID=comp160389_c0_seq1.path2;Name=comp160389_c0_seq1;Dir=indeterminatecoverage=96.3;identity=86.5;matches=1465;mismatches=60;indels=169;unknowns=0;Target=comp160389_c0_seq1 1620 1351 .;locus=RLOC_00013224
Chr1	stalkie_big_nohaplotig	exon	163807085	163807092	100	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 93 86 .
Chr1	stalkie_big_nohaplotig	exon	163810544	163810546	100	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 97 95 .
Chr1	stalkie_big_nohaplotig	exon	163811747	163811753	100	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 104 98 .
Chr1	stalkie_big_nohaplotig	exon	163816827	163816829	66	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 107 105 .
Chr1	stalkie_big_nohaplotig	exon	163824588	163824593	100	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 113 108 .
Chr1	stalkie_big_nohaplotig	exon	163834264	163834294	75	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 148 114 .
Chr1	stalkie_big_nohaplotig	exon	163839324	163839332	100	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 157 149 .
Chr1	stalkie_big_nohaplotig	exon	163840141	163840150	100	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 232 223 .
Chr1	stalkie_big_nohaplotig	exon	163840269	163840290	51	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 265 233 .
Chr1	stalkie_big_nohaplotig	exon	163841591	163841616	56	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 312 267 .
Chr1	stalkie_big_nohaplotig	exon	163842256	163842309	48	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 387 313 .
Chr1	stalkie_big_nohaplotig	exon	163844090	163844096	100	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 394 388 .
Chr1	stalkie_big_nohaplotig	exon	163844646	163844653	100	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 402 395 .
Chr1	stalkie_big_nohaplotig	exon	163846151	163846158	100	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 410 403 .
Chr1	stalkie_big_nohaplotig	exon	163846301	163846388	37	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 591 411 .
Chr1	stalkie_big_nohaplotig	exon	163846753	163846787	57	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 648 616 .
Chr1	stalkie_big_nohaplotig	exon	163846835	163846843	100	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 733 725 .
Chr1	stalkie_big_nohaplotig	exon	163846963	163846965	100	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 916 914 .
Chr1	stalkie_big_nohaplotig	exon	163847211	163847221	100	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 927 917 .
Chr1	stalkie_big_nohaplotig	exon	163850976	163850977	100	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 1053 1052 .
Chr1	stalkie_big_nohaplotig	exon	163857459	163857464	100	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 1059 1054 .
Chr1	stalkie_big_nohaplotig	exon	163857482	163857487	100	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 1121 1116 .
Chr1	stalkie_big_nohaplotig	exon	163857981	163859143	98	+	.	Parent=comp160389_c0_seq1.mrna2;Target=comp160389_c0_seq1 2296 1122 .
Chr1	stalkie_big_nohaplotig	CDS	163858209	163858470	.	+	0	Parent=comp160389_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	163837966	163839757	.	+	.	ID=FBgn0003009.1.mrna1;geneID=FBgn0003009.1.path1;Name=FBgn0003009.1;Dir=sensecoverage=100.0;identity=99.2;matches=1360;mismatches=11;indels=0;unknowns=0;locus=RLOC_00013224
Chr1	stalkie_big_nohaplotig	exon	163837966	163838046	100	+	.	Parent=FBgn0003009.1.mrna1;Target=FBgn0003009.1 1 81 +
Chr1	stalkie_big_nohaplotig	exon	163838101	163838702	98	+	.	Parent=FBgn0003009.1.mrna1;Target=FBgn0003009.1 82 683 +
Chr1	stalkie_big_nohaplotig	exon	163838881	163839139	99	+	.	Parent=FBgn0003009.1.mrna1;Target=FBgn0003009.1 684 942 +
Chr1	stalkie_big_nohaplotig	exon	163839215	163839400	100	+	.	Parent=FBgn0003009.1.mrna1;Target=FBgn0003009.1 943 1128 +
Chr1	stalkie_big_nohaplotig	exon	163839462	163839533	98	+	.	Parent=FBgn0003009.1.mrna1;Target=FBgn0003009.1 1129 1200 +
Chr1	stalkie_big_nohaplotig	exon	163839587	163839757	100	+	.	Parent=FBgn0003009.1.mrna1;Target=FBgn0003009.1 1201 1371 +
Chr1	stalkie_big_nohaplotig	CDS	163837966	163838046	.	+	0	Parent=FBgn0003009.1.mrna1;Target=FBgn0003009.1 1 81 +
Chr1	stalkie_big_nohaplotig	CDS	163838101	163838702	.	+	0	Parent=FBgn0003009.1.mrna1;Target=FBgn0003009.1 82 683 +
Chr1	stalkie_big_nohaplotig	CDS	163838881	163839139	.	+	1	Parent=FBgn0003009.1.mrna1;Target=FBgn0003009.1 684 942 +
Chr1	stalkie_big_nohaplotig	CDS	163839215	163839400	.	+	0	Parent=FBgn0003009.1.mrna1;Target=FBgn0003009.1 943 1128 +
Chr1	stalkie_big_nohaplotig	CDS	163839462	163839533	.	+	0	Parent=FBgn0003009.1.mrna1;Target=FBgn0003009.1 1129 1200 +
Chr1	stalkie_big_nohaplotig	CDS	163839587	163839757	.	+	0	Parent=FBgn0003009.1.mrna1;Target=FBgn0003009.1 1201 1371 +
Chr1	stalkie_big_nohaplotig	mRNA	163845984	163846491	.	-	.	ID=comp144875_c0_seq1.mrna1;geneID=comp144875_c0_seq1.path1;Name=comp144875_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.4;matches=505;mismatches=2;indels=1;unknowns=0;Target=comp144875_c0_seq1 515 9 .;CDS_Target=comp144875_c0_seq1 103 11 .;locus=RLOC_00013224
Chr1	stalkie_big_nohaplotig	exon	163845984	163846491	99	-	.	Parent=comp144875_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	163846397	163846489	.	-	0	Parent=comp144875_c0_seq1.mrna1
Chr1	gffcl	locus	162238846	162240429	.	+	.	ID=RLOC_00013225;geneIDs=comp147369_c0_seq1.path1,comp161095_c0_seq1.path1;transcripts=comp161095_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162239272	162240429	.	+	.	ID=comp161095_c0_seq1.mrna1;geneID=comp161095_c0_seq1.path1;Name=comp161095_c0_seq1;Dir=indeterminatecoverage=99.7;identity=92.7;matches=1097;mismatches=56;indels=30;unknowns=0;Target=comp161095_c0_seq1 1181 4 .;CDS_Target=comp161095_c0_seq1 203 147 .;locus=RLOC_00013225
Chr1	stalkie_big_nohaplotig	exon	162239272	162240429	92	+	.	Parent=comp161095_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162239420	162239476	.	+	0	Parent=comp161095_c0_seq1.mrna1
Chr1	gffcl	locus	162266141	162267269	.	-	.	ID=RLOC_00013226;geneIDs=ORF1544.path1;transcripts=ORF1544.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162266141	162267269	.	-	.	ID=ORF1544.mrna1;geneID=ORF1544.path1;Name=ORF1544;Dir=sensecoverage=100.0;identity=98.7;matches=1051;mismatches=14;indels=0;unknowns=0;locus=RLOC_00013226
Chr1	stalkie_big_nohaplotig	exon	162266141	162267108	98	-	.	Parent=ORF1544.mrna1;Target=ORF1544 98 1065 +
Chr1	stalkie_big_nohaplotig	exon	162267173	162267269	97	-	.	Parent=ORF1544.mrna1;Target=ORF1544 1 97 +
Chr1	stalkie_big_nohaplotig	CDS	162266141	162267108	.	-	2	Parent=ORF1544.mrna1;Target=ORF1544 98 1065 +
Chr1	stalkie_big_nohaplotig	CDS	162267173	162267269	.	-	0	Parent=ORF1544.mrna1;Target=ORF1544 1 97 +
Chr1	gffcl	locus	162292312	162297168	.	-	.	ID=RLOC_00013227;geneIDs=comp151052_c0_seq1.path1;transcripts=comp151052_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162292312	162297168	.	-	.	ID=comp151052_c0_seq1.mrna1;geneID=comp151052_c0_seq1.path1;Name=comp151052_c0_seq1;Dir=sensecoverage=95.2;identity=99.8;matches=892;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013227
Chr1	stalkie_big_nohaplotig	exon	162292312	162292774	99	-	.	Parent=comp151052_c0_seq1.mrna1;Target=comp151052_c0_seq1 439 901 +
Chr1	stalkie_big_nohaplotig	exon	162293576	162293749	100	-	.	Parent=comp151052_c0_seq1.mrna1;Target=comp151052_c0_seq1 265 438 +
Chr1	stalkie_big_nohaplotig	exon	162293946	162294078	100	-	.	Parent=comp151052_c0_seq1.mrna1;Target=comp151052_c0_seq1 132 264 +
Chr1	stalkie_big_nohaplotig	exon	162297045	162297168	99	-	.	Parent=comp151052_c0_seq1.mrna1;Target=comp151052_c0_seq1 8 131 +
Chr1	stalkie_big_nohaplotig	CDS	162292487	162292774	.	-	0	Parent=comp151052_c0_seq1.mrna1;Target=comp151052_c0_seq1 439 726 +
Chr1	stalkie_big_nohaplotig	CDS	162293576	162293749	.	-	0	Parent=comp151052_c0_seq1.mrna1;Target=comp151052_c0_seq1 265 438 +
Chr1	stalkie_big_nohaplotig	CDS	162293946	162294038	.	-	0	Parent=comp151052_c0_seq1.mrna1;Target=comp151052_c0_seq1 172 264 +
Chr1	gffcl	locus	162292874	162293398	.	-	.	ID=RLOC_00013228;geneIDs=comp154595_c0_seq1.path1;transcripts=comp154595_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162292874	162293398	.	-	.	ID=comp154595_c0_seq1.mrna1;geneID=comp154595_c0_seq1.path1;Name=comp154595_c0_seq1;Dir=indeterminatecoverage=93.0;identity=94.0;matches=499;mismatches=24;indels=8;unknowns=0;Target=comp154595_c0_seq1 529 1 .;CDS_Target=comp154595_c0_seq1 123 1 .;locus=RLOC_00013228
Chr1	stalkie_big_nohaplotig	exon	162292874	162293398	93	-	.	Parent=comp154595_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162293276	162293398	.	-	0	Parent=comp154595_c0_seq1.mrna1
Chr1	gffcl	locus	162298733	162300387	.	-	.	ID=RLOC_00013229;geneIDs=FBgn0039030.1.path1;transcripts=FBgn0039030.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162298733	162300387	.	-	.	ID=FBgn0039030.1.mrna1;geneID=FBgn0039030.1.path1;Name=FBgn0039030.1;Dir=sensecoverage=100.0;identity=99.7;matches=882;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013229
Chr1	stalkie_big_nohaplotig	exon	162298733	162299106	100	-	.	Parent=FBgn0039030.1.mrna1;Target=FBgn0039030.1 512 885 +
Chr1	stalkie_big_nohaplotig	exon	162299178	162299283	100	-	.	Parent=FBgn0039030.1.mrna1;Target=FBgn0039030.1 406 511 +
Chr1	stalkie_big_nohaplotig	exon	162299838	162299981	100	-	.	Parent=FBgn0039030.1.mrna1;Target=FBgn0039030.1 262 405 +
Chr1	stalkie_big_nohaplotig	exon	162300061	162300251	99	-	.	Parent=FBgn0039030.1.mrna1;Target=FBgn0039030.1 71 261 +
Chr1	stalkie_big_nohaplotig	exon	162300318	162300387	97	-	.	Parent=FBgn0039030.1.mrna1;Target=FBgn0039030.1 1 70 +
Chr1	stalkie_big_nohaplotig	CDS	162298733	162299106	.	-	2	Parent=FBgn0039030.1.mrna1;Target=FBgn0039030.1 512 885 +
Chr1	stalkie_big_nohaplotig	CDS	162299178	162299283	.	-	0	Parent=FBgn0039030.1.mrna1;Target=FBgn0039030.1 406 511 +
Chr1	stalkie_big_nohaplotig	CDS	162299838	162299981	.	-	0	Parent=FBgn0039030.1.mrna1;Target=FBgn0039030.1 262 405 +
Chr1	stalkie_big_nohaplotig	CDS	162300061	162300251	.	-	2	Parent=FBgn0039030.1.mrna1;Target=FBgn0039030.1 71 261 +
Chr1	stalkie_big_nohaplotig	CDS	162300318	162300387	.	-	0	Parent=FBgn0039030.1.mrna1;Target=FBgn0039030.1 1 70 +
Chr1	gffcl	locus	162331699	162332802	.	-	.	ID=RLOC_00013231;geneIDs=FBgn0051961.2.path1;transcripts=FBgn0051961.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162331699	162332802	.	-	.	ID=FBgn0051961.2.mrna1;geneID=FBgn0051961.2.path1;Name=FBgn0051961.2;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1097;mismatches=7;indels=0;unknowns=0;Target=FBgn0051961.2 1104 1 .;locus=RLOC_00013231
Chr1	stalkie_big_nohaplotig	exon	162331699	162332802	99	-	.	Parent=FBgn0051961.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162331699	162332802	.	-	0	Parent=FBgn0051961.2.mrna1
Chr1	gffcl	locus	162333670	162335400	.	-	.	ID=RLOC_00013232;geneIDs=FBgn0051961.3.path1;transcripts=FBgn0051961.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162333670	162335400	.	-	.	ID=FBgn0051961.3.mrna1;geneID=FBgn0051961.3.path1;Name=FBgn0051961.3;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1716;mismatches=15;indels=0;unknowns=0;Target=FBgn0051961.3 1731 1 .;locus=RLOC_00013232
Chr1	stalkie_big_nohaplotig	exon	162333670	162335400	99	-	.	Parent=FBgn0051961.3.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162333670	162335400	.	-	0	Parent=FBgn0051961.3.mrna1
Chr1	gffcl	locus	162337414	162338667	.	-	.	ID=RLOC_00013233;geneIDs=comp152220_c0_seq1.path1;transcripts=comp152220_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162337414	162338667	.	-	.	ID=comp152220_c0_seq1.mrna1;geneID=comp152220_c0_seq1.path1;Name=comp152220_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.8;matches=1241;mismatches=13;indels=2;unknowns=0;Target=comp152220_c0_seq1 1257 2 .;CDS_Target=comp152220_c0_seq1 957 724 .;locus=RLOC_00013233
Chr1	stalkie_big_nohaplotig	exon	162337414	162338667	98	-	.	Parent=comp152220_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162337714	162337947	.	-	0	Parent=comp152220_c0_seq1.mrna1
Chr1	gffcl	locus	162345622	162347626	.	-	.	ID=RLOC_00013234;geneIDs=comp155904_c0_seq1.path1;transcripts=comp155904_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162345622	162347626	.	-	.	ID=comp155904_c0_seq1.mrna1;geneID=comp155904_c0_seq1.path1;Name=comp155904_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.4;matches=1993;mismatches=12;indels=0;unknowns=0;Target=comp155904_c0_seq1 2007 3 .;CDS_Target=comp155904_c0_seq1 390 247 .;locus=RLOC_00013234
Chr1	stalkie_big_nohaplotig	exon	162345622	162347626	99	-	.	Parent=comp155904_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162347239	162347382	.	-	0	Parent=comp155904_c0_seq1.mrna1
Chr1	gffcl	locus	162352342	162353286	.	+	.	ID=RLOC_00013235;geneIDs=ORF1983.path1;transcripts=ORF1983.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162352342	162353286	.	+	.	ID=ORF1983.mrna1;geneID=ORF1983.path1;Name=ORF1983;Dir=indeterminatecoverage=100.0;identity=98.3;matches=929;mismatches=16;indels=0;unknowns=0;Target=ORF1983 945 1 .;locus=RLOC_00013235
Chr1	stalkie_big_nohaplotig	exon	162352342	162353286	98	+	.	Parent=ORF1983.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162352342	162353286	.	+	0	Parent=ORF1983.mrna1
Chr1	gffcl	locus	162355898	162357877	.	+	.	ID=RLOC_00013236;geneIDs=comp151045_c0_seq1.path1;transcripts=comp151045_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162355898	162357877	.	+	.	ID=comp151045_c0_seq1.mrna1;geneID=comp151045_c0_seq1.path1;Name=comp151045_c0_seq1;Dir=sensecoverage=99.2;identity=97.5;matches=702;mismatches=14;indels=4;unknowns=0;locus=RLOC_00013236
Chr1	stalkie_big_nohaplotig	exon	162355898	162356115	98	+	.	Parent=comp151045_c0_seq1.mrna1;Target=comp151045_c0_seq1 1 219 +
Chr1	stalkie_big_nohaplotig	exon	162357063	162357236	99	+	.	Parent=comp151045_c0_seq1.mrna1;Target=comp151045_c0_seq1 220 393 +
Chr1	stalkie_big_nohaplotig	exon	162357554	162357877	96	+	.	Parent=comp151045_c0_seq1.mrna1;Target=comp151045_c0_seq1 394 720 +
Chr1	stalkie_big_nohaplotig	CDS	162356005	162356115	.	+	0	Parent=comp151045_c0_seq1.mrna1;Target=comp151045_c0_seq1 109 219 +
Chr1	stalkie_big_nohaplotig	CDS	162357063	162357236	.	+	0	Parent=comp151045_c0_seq1.mrna1;Target=comp151045_c0_seq1 220 393 +
Chr1	stalkie_big_nohaplotig	CDS	162357554	162357736	.	+	0	Parent=comp151045_c0_seq1.mrna1;Target=comp151045_c0_seq1 394 576 +
Chr1	gffcl	locus	162383259	162392462	.	+	.	ID=RLOC_00013237;geneIDs=FBgn0035679.1.path1,comp135707_c1_seq1.path1,comp137722_c0_seq1.path1,comp159279_c0_seq1.path1;transcripts=FBgn0035679.1.mrna1,comp137722_c0_seq1.mrna1,comp159279_c0_seq1.mrna1,comp135707_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162383259	162392462	.	+	.	ID=FBgn0035679.1.mrna1;geneID=FBgn0035679.1.path1;Name=FBgn0035679.1;Dir=sensecoverage=100.0;identity=99.7;matches=1139;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013237
Chr1	stalkie_big_nohaplotig	exon	162383259	162383411	99	+	.	Parent=FBgn0035679.1.mrna1;Target=FBgn0035679.1 1 153 +
Chr1	stalkie_big_nohaplotig	exon	162386142	162386235	100	+	.	Parent=FBgn0035679.1.mrna1;Target=FBgn0035679.1 154 247 +
Chr1	stalkie_big_nohaplotig	exon	162388430	162388803	100	+	.	Parent=FBgn0035679.1.mrna1;Target=FBgn0035679.1 248 621 +
Chr1	stalkie_big_nohaplotig	exon	162390252	162390487	98	+	.	Parent=FBgn0035679.1.mrna1;Target=FBgn0035679.1 622 857 +
Chr1	stalkie_big_nohaplotig	exon	162390607	162390703	100	+	.	Parent=FBgn0035679.1.mrna1;Target=FBgn0035679.1 858 954 +
Chr1	stalkie_big_nohaplotig	exon	162392035	162392124	100	+	.	Parent=FBgn0035679.1.mrna1;Target=FBgn0035679.1 955 1044 +
Chr1	stalkie_big_nohaplotig	exon	162392364	162392462	100	+	.	Parent=FBgn0035679.1.mrna1;Target=FBgn0035679.1 1045 1143 +
Chr1	stalkie_big_nohaplotig	CDS	162383259	162383411	.	+	0	Parent=FBgn0035679.1.mrna1;Target=FBgn0035679.1 1 153 +
Chr1	stalkie_big_nohaplotig	CDS	162386142	162386235	.	+	0	Parent=FBgn0035679.1.mrna1;Target=FBgn0035679.1 154 247 +
Chr1	stalkie_big_nohaplotig	CDS	162388430	162388803	.	+	2	Parent=FBgn0035679.1.mrna1;Target=FBgn0035679.1 248 621 +
Chr1	stalkie_big_nohaplotig	CDS	162390252	162390487	.	+	0	Parent=FBgn0035679.1.mrna1;Target=FBgn0035679.1 622 857 +
Chr1	stalkie_big_nohaplotig	CDS	162390607	162390703	.	+	1	Parent=FBgn0035679.1.mrna1;Target=FBgn0035679.1 858 954 +
Chr1	stalkie_big_nohaplotig	CDS	162392035	162392124	.	+	0	Parent=FBgn0035679.1.mrna1;Target=FBgn0035679.1 955 1044 +
Chr1	stalkie_big_nohaplotig	CDS	162392364	162392462	.	+	0	Parent=FBgn0035679.1.mrna1;Target=FBgn0035679.1 1045 1143 +
Chr1	stalkie_big_nohaplotig	mRNA	162383390	162384697	.	+	.	ID=comp137722_c0_seq1.mrna1;geneID=comp137722_c0_seq1.path1;Name=comp137722_c0_seq1;Dir=indeterminatecoverage=97.8;identity=93.5;matches=1210;mismatches=67;indels=17;unknowns=0;Target=comp137722_c0_seq1 372 223 .;locus=RLOC_00013237
Chr1	stalkie_big_nohaplotig	exon	162383390	162384317	92	+	.	Parent=comp137722_c0_seq1.mrna1;Target=comp137722_c0_seq1 933 1 .
Chr1	stalkie_big_nohaplotig	exon	162384345	162384697	96	+	.	Parent=comp137722_c0_seq1.mrna1;Target=comp137722_c0_seq1 1303 947 .
Chr1	stalkie_big_nohaplotig	CDS	162383608	162383757	.	+	0	Parent=comp137722_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162385035	162386163	.	+	.	ID=comp159279_c0_seq1.mrna1;geneID=comp159279_c0_seq1.path1;Name=comp159279_c0_seq1;Dir=indeterminatecoverage=97.2;identity=96.5;matches=1114;mismatches=15;indels=25;unknowns=0;Target=comp159279_c0_seq1 1187 34 .;CDS_Target=comp159279_c0_seq1 585 487 .;locus=RLOC_00013237
Chr1	stalkie_big_nohaplotig	exon	162385035	162386163	96	+	.	Parent=comp159279_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162385488	162385567	.	+	0	Parent=comp159279_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162392101	162392387	.	+	.	ID=comp135707_c1_seq1.mrna1;geneID=comp135707_c1_seq1.path1;Name=comp135707_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=286;mismatches=1;indels=0;unknowns=0;Target=comp135707_c1_seq1 287 1 .;CDS_Target=comp135707_c1_seq1 137 3 .;locus=RLOC_00013237
Chr1	stalkie_big_nohaplotig	exon	162392101	162392387	99	+	.	Parent=comp135707_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162392103	162392237	.	+	0	Parent=comp135707_c1_seq1.mrna1
Chr1	gffcl	locus	162390727	162391882	.	-	.	ID=RLOC_00013238;geneIDs=comp153470_c0_seq1.path1;transcripts=comp153470_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162390727	162391882	.	-	.	ID=comp153470_c0_seq1.mrna1;geneID=comp153470_c0_seq1.path1;Name=comp153470_c0_seq1;Dir=indeterminatecoverage=99.4;identity=98.6;matches=1143;mismatches=12;indels=4;unknowns=0;Target=comp153470_c0_seq1 1160 3 .;CDS_Target=comp153470_c0_seq1 618 436 .;locus=RLOC_00013238
Chr1	stalkie_big_nohaplotig	exon	162390727	162391882	98	-	.	Parent=comp153470_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162391267	162391449	.	-	0	Parent=comp153470_c0_seq1.mrna1
Chr1	gffcl	locus	162395366	162399413	.	.	.	ID=RLOC_00013239;geneIDs=FBgn0035679.2.path1,comp144630_c0_seq1.path1;transcripts=FBgn0035679.2.mrna1,comp144630_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162395366	162399413	.	+	.	ID=FBgn0035679.2.mrna1;geneID=FBgn0035679.2.path1;Name=FBgn0035679.2;Dir=sensecoverage=100.0;identity=99.6;matches=1246;mismatches=5;indels=0;unknowns=0;locus=RLOC_00013239
Chr1	stalkie_big_nohaplotig	exon	162395366	162395599	100	+	.	Parent=FBgn0035679.2.mrna1;Target=FBgn0035679.2 1 234 +
Chr1	stalkie_big_nohaplotig	exon	162396963	162397056	100	+	.	Parent=FBgn0035679.2.mrna1;Target=FBgn0035679.2 235 328 +
Chr1	stalkie_big_nohaplotig	exon	162397164	162397546	99	+	.	Parent=FBgn0035679.2.mrna1;Target=FBgn0035679.2 329 711 +
Chr1	stalkie_big_nohaplotig	exon	162397614	162397846	99	+	.	Parent=FBgn0035679.2.mrna1;Target=FBgn0035679.2 712 944 +
Chr1	stalkie_big_nohaplotig	exon	162397909	162398011	100	+	.	Parent=FBgn0035679.2.mrna1;Target=FBgn0035679.2 945 1047 +
Chr1	stalkie_big_nohaplotig	exon	162399046	162399138	100	+	.	Parent=FBgn0035679.2.mrna1;Target=FBgn0035679.2 1048 1140 +
Chr1	stalkie_big_nohaplotig	exon	162399303	162399413	99	+	.	Parent=FBgn0035679.2.mrna1;Target=FBgn0035679.2 1141 1251 +
Chr1	stalkie_big_nohaplotig	CDS	162395366	162395599	.	+	0	Parent=FBgn0035679.2.mrna1;Target=FBgn0035679.2 1 234 +
Chr1	stalkie_big_nohaplotig	CDS	162396963	162397056	.	+	0	Parent=FBgn0035679.2.mrna1;Target=FBgn0035679.2 235 328 +
Chr1	stalkie_big_nohaplotig	CDS	162397164	162397546	.	+	2	Parent=FBgn0035679.2.mrna1;Target=FBgn0035679.2 329 711 +
Chr1	stalkie_big_nohaplotig	CDS	162397614	162397846	.	+	0	Parent=FBgn0035679.2.mrna1;Target=FBgn0035679.2 712 944 +
Chr1	stalkie_big_nohaplotig	CDS	162397909	162398011	.	+	1	Parent=FBgn0035679.2.mrna1;Target=FBgn0035679.2 945 1047 +
Chr1	stalkie_big_nohaplotig	CDS	162399046	162399138	.	+	0	Parent=FBgn0035679.2.mrna1;Target=FBgn0035679.2 1048 1140 +
Chr1	stalkie_big_nohaplotig	CDS	162399303	162399413	.	+	0	Parent=FBgn0035679.2.mrna1;Target=FBgn0035679.2 1141 1251 +
Chr1	stalkie_big_nohaplotig	mRNA	162396506	162396983	.	-	.	ID=comp144630_c0_seq1.mrna1;geneID=comp144630_c0_seq1.path1;Name=comp144630_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.2;matches=451;mismatches=24;indels=4;unknowns=0;Target=comp144630_c0_seq1 476 1 .;CDS_Target=comp144630_c0_seq1 295 233 .;locus=RLOC_00013239
Chr1	stalkie_big_nohaplotig	exon	162396506	162396983	94	-	.	Parent=comp144630_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162396690	162396752	.	-	0	Parent=comp144630_c0_seq1.mrna1
Chr1	gffcl	locus	162395576	162403885	.	-	.	ID=RLOC_00013240;geneIDs=comp140765_c0_seq1.path1;transcripts=comp140765_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162395576	162403885	.	-	.	ID=comp140765_c0_seq1.mrna1;geneID=comp140765_c0_seq1.path1;Name=comp140765_c0_seq1;Dir=indeterminatecoverage=64.3;identity=90.8;matches=501;mismatches=23;indels=28;unknowns=0;Target=comp140765_c0_seq1 540 463 .;locus=RLOC_00013240
Chr1	stalkie_big_nohaplotig	exon	162395576	162396115	90	-	.	Parent=comp140765_c0_seq1.mrna1;Target=comp140765_c0_seq1 819 304 .
Chr1	stalkie_big_nohaplotig	exon	162399176	162399178	100	-	.	Parent=comp140765_c0_seq1.mrna1;Target=comp140765_c0_seq1 303 301 .
Chr1	stalkie_big_nohaplotig	exon	162403879	162403885	100	-	.	Parent=comp140765_c0_seq1.mrna1;Target=comp140765_c0_seq1 299 293 .
Chr1	stalkie_big_nohaplotig	CDS	162395855	162395948	.	-	0	Parent=comp140765_c0_seq1.mrna1
Chr1	gffcl	locus	162399574	162399767	.	+	.	ID=RLOC_00013241;geneIDs=comp92314_c0_seq1.path2;transcripts=comp92314_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	162399574	162399767	.	+	.	ID=comp92314_c0_seq1.mrna2;geneID=comp92314_c0_seq1.path2;Name=comp92314_c0_seq1;Dir=indeterminatecoverage=100.0;identity=86.6;matches=187;mismatches=3;indels=26;unknowns=0;Target=comp92314_c0_seq1 212 1 .;CDS_Target=comp92314_c0_seq1 74 3 .;locus=RLOC_00013241
Chr1	stalkie_big_nohaplotig	exon	162399574	162399767	86	+	.	Parent=comp92314_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	162399576	162399625	.	+	0	Parent=comp92314_c0_seq1.mrna2
Chr1	gffcl	locus	162453819	162454008	.	-	.	ID=RLOC_00013242;geneIDs=comp92314_c0_seq1.path1;transcripts=comp92314_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162453819	162454008	.	-	.	ID=comp92314_c0_seq1.mrna1;geneID=comp92314_c0_seq1.path1;Name=comp92314_c0_seq1;Dir=indeterminatecoverage=100.0;identity=88.2;matches=187;mismatches=3;indels=22;unknowns=0;Target=comp92314_c0_seq1 212 1 .;CDS_Target=comp92314_c0_seq1 74 3 .;locus=RLOC_00013242
Chr1	stalkie_big_nohaplotig	exon	162453819	162454008	88	-	.	Parent=comp92314_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162453949	162454006	.	-	0	Parent=comp92314_c0_seq1.mrna1
Chr1	gffcl	locus	162456743	162460056	.	+	.	ID=RLOC_00013243;geneIDs=comp143023_c1_seq1.path1;transcripts=comp143023_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162456743	162460056	.	+	.	ID=comp143023_c1_seq1.mrna1;geneID=comp143023_c1_seq1.path1;Name=comp143023_c1_seq1;Dir=sensecoverage=100.0;identity=97.9;matches=704;mismatches=3;indels=12;unknowns=0;Target=comp143023_c1_seq1 206 457 +;locus=RLOC_00013243
Chr1	stalkie_big_nohaplotig	exon	162456743	162456891	100	+	.	Parent=comp143023_c1_seq1.mrna1;Target=comp143023_c1_seq1 1 149 +
Chr1	stalkie_big_nohaplotig	exon	162459492	162460056	97	+	.	Parent=comp143023_c1_seq1.mrna1;Target=comp143023_c1_seq1 150 712 +
Chr1	stalkie_big_nohaplotig	CDS	162459548	162459799	.	+	0	Parent=comp143023_c1_seq1.mrna1
Chr1	gffcl	locus	162479809	162485692	.	+	.	ID=RLOC_00013244;geneIDs=FBgn0039747.1.path1;transcripts=FBgn0039747.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162479809	162485692	.	+	.	ID=FBgn0039747.1.mrna1;geneID=FBgn0039747.1.path1;Name=FBgn0039747.1;Dir=sensecoverage=100.0;identity=99.9;matches=2493;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013244
Chr1	stalkie_big_nohaplotig	exon	162479809	162480310	99	+	.	Parent=FBgn0039747.1.mrna1;Target=FBgn0039747.1 1 502 +
Chr1	stalkie_big_nohaplotig	exon	162483423	162483634	100	+	.	Parent=FBgn0039747.1.mrna1;Target=FBgn0039747.1 503 714 +
Chr1	stalkie_big_nohaplotig	exon	162483689	162484187	99	+	.	Parent=FBgn0039747.1.mrna1;Target=FBgn0039747.1 715 1213 +
Chr1	stalkie_big_nohaplotig	exon	162484410	162485692	100	+	.	Parent=FBgn0039747.1.mrna1;Target=FBgn0039747.1 1214 2496 +
Chr1	stalkie_big_nohaplotig	CDS	162479809	162480310	.	+	0	Parent=FBgn0039747.1.mrna1;Target=FBgn0039747.1 1 502 +
Chr1	stalkie_big_nohaplotig	CDS	162483423	162483634	.	+	2	Parent=FBgn0039747.1.mrna1;Target=FBgn0039747.1 503 714 +
Chr1	stalkie_big_nohaplotig	CDS	162483689	162484187	.	+	0	Parent=FBgn0039747.1.mrna1;Target=FBgn0039747.1 715 1213 +
Chr1	stalkie_big_nohaplotig	CDS	162484410	162485692	.	+	2	Parent=FBgn0039747.1.mrna1;Target=FBgn0039747.1 1214 2496 +
Chr1	gffcl	locus	162487832	162489493	.	+	.	ID=RLOC_00013245;geneIDs=FBgn0053505.1.path1;transcripts=FBgn0053505.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162487832	162489493	.	+	.	ID=FBgn0053505.1.mrna1;geneID=FBgn0053505.1.path1;Name=FBgn0053505.1;Dir=sensecoverage=100.0;identity=99.6;matches=1434;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013245
Chr1	stalkie_big_nohaplotig	exon	162487832	162487891	98	+	.	Parent=FBgn0053505.1.mrna1;Target=FBgn0053505.1 1 60 +
Chr1	stalkie_big_nohaplotig	exon	162487947	162488752	99	+	.	Parent=FBgn0053505.1.mrna1;Target=FBgn0053505.1 61 866 +
Chr1	stalkie_big_nohaplotig	exon	162488809	162489006	100	+	.	Parent=FBgn0053505.1.mrna1;Target=FBgn0053505.1 867 1064 +
Chr1	stalkie_big_nohaplotig	exon	162489060	162489196	100	+	.	Parent=FBgn0053505.1.mrna1;Target=FBgn0053505.1 1065 1201 +
Chr1	stalkie_big_nohaplotig	exon	162489255	162489493	99	+	.	Parent=FBgn0053505.1.mrna1;Target=FBgn0053505.1 1202 1440 +
Chr1	stalkie_big_nohaplotig	CDS	162487832	162487891	.	+	0	Parent=FBgn0053505.1.mrna1;Target=FBgn0053505.1 1 60 +
Chr1	stalkie_big_nohaplotig	CDS	162487947	162488752	.	+	0	Parent=FBgn0053505.1.mrna1;Target=FBgn0053505.1 61 866 +
Chr1	stalkie_big_nohaplotig	CDS	162488809	162489006	.	+	1	Parent=FBgn0053505.1.mrna1;Target=FBgn0053505.1 867 1064 +
Chr1	stalkie_big_nohaplotig	CDS	162489060	162489196	.	+	1	Parent=FBgn0053505.1.mrna1;Target=FBgn0053505.1 1065 1201 +
Chr1	stalkie_big_nohaplotig	CDS	162489255	162489493	.	+	2	Parent=FBgn0053505.1.mrna1;Target=FBgn0053505.1 1202 1440 +
Chr1	gffcl	locus	162489827	162491734	.	-	.	ID=RLOC_00013246;geneIDs=FBgn0033973.1.path1;transcripts=FBgn0033973.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162489827	162491734	.	-	.	ID=FBgn0033973.1.mrna1;geneID=FBgn0033973.1.path1;Name=FBgn0033973.1;Dir=sensecoverage=100.0;identity=98.9;matches=1765;mismatches=20;indels=0;unknowns=0;locus=RLOC_00013246
Chr1	stalkie_big_nohaplotig	exon	162489827	162490302	98	-	.	Parent=FBgn0033973.1.mrna1;Target=FBgn0033973.1 1310 1785 +
Chr1	stalkie_big_nohaplotig	exon	162490363	162491538	98	-	.	Parent=FBgn0033973.1.mrna1;Target=FBgn0033973.1 134 1309 +
Chr1	stalkie_big_nohaplotig	exon	162491602	162491734	100	-	.	Parent=FBgn0033973.1.mrna1;Target=FBgn0033973.1 1 133 +
Chr1	stalkie_big_nohaplotig	CDS	162489827	162490302	.	-	2	Parent=FBgn0033973.1.mrna1;Target=FBgn0033973.1 1310 1785 +
Chr1	stalkie_big_nohaplotig	CDS	162490363	162491538	.	-	2	Parent=FBgn0033973.1.mrna1;Target=FBgn0033973.1 134 1309 +
Chr1	stalkie_big_nohaplotig	CDS	162491602	162491734	.	-	0	Parent=FBgn0033973.1.mrna1;Target=FBgn0033973.1 1 133 +
Chr1	gffcl	locus	162492039	162493043	.	+	.	ID=RLOC_00013247;geneIDs=FBgn0033972.1.path1;transcripts=FBgn0033972.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162492039	162493043	.	+	.	ID=FBgn0033972.1.mrna1;geneID=FBgn0033972.1.path1;Name=FBgn0033972.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=998;mismatches=7;indels=0;unknowns=0;Target=FBgn0033972.1 1005 1 .;locus=RLOC_00013247
Chr1	stalkie_big_nohaplotig	exon	162492039	162493043	99	+	.	Parent=FBgn0033972.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162492039	162493043	.	+	0	Parent=FBgn0033972.1.mrna1
Chr1	gffcl	locus	162493171	162494062	.	-	.	ID=RLOC_00013248;geneIDs=FBgn0028434.1.path1;transcripts=FBgn0028434.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162493171	162494062	.	-	.	ID=FBgn0028434.1.mrna1;geneID=FBgn0028434.1.path1;Name=FBgn0028434.1;Dir=sensecoverage=100.0;identity=99.9;matches=782;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013248
Chr1	stalkie_big_nohaplotig	exon	162493171	162493356	99	-	.	Parent=FBgn0028434.1.mrna1;Target=FBgn0028434.1 598 783 +
Chr1	stalkie_big_nohaplotig	exon	162493410	162493583	100	-	.	Parent=FBgn0028434.1.mrna1;Target=FBgn0028434.1 424 597 +
Chr1	stalkie_big_nohaplotig	exon	162493640	162494062	100	-	.	Parent=FBgn0028434.1.mrna1;Target=FBgn0028434.1 1 423 +
Chr1	stalkie_big_nohaplotig	CDS	162493171	162493356	.	-	0	Parent=FBgn0028434.1.mrna1;Target=FBgn0028434.1 598 783 +
Chr1	stalkie_big_nohaplotig	CDS	162493410	162493583	.	-	0	Parent=FBgn0028434.1.mrna1;Target=FBgn0028434.1 424 597 +
Chr1	stalkie_big_nohaplotig	CDS	162493640	162494062	.	-	0	Parent=FBgn0028434.1.mrna1;Target=FBgn0028434.1 1 423 +
Chr1	gffcl	locus	162498759	162501405	.	+	.	ID=RLOC_00013249;geneIDs=FBgn0025393.1.path1;transcripts=FBgn0025393.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162498759	162501405	.	+	.	ID=FBgn0025393.1.mrna1;geneID=FBgn0025393.1.path1;Name=FBgn0025393.1;Dir=sensecoverage=97.9;identity=96.9;matches=407;mismatches=7;indels=6;unknowns=0;locus=RLOC_00013249
Chr1	stalkie_big_nohaplotig	exon	162498759	162498951	95	+	.	Parent=FBgn0025393.1.mrna1;Target=FBgn0025393.1 10 196 +
Chr1	stalkie_big_nohaplotig	exon	162499052	162499222	97	+	.	Parent=FBgn0025393.1.mrna1;Target=FBgn0025393.1 197 367 +
Chr1	stalkie_big_nohaplotig	exon	162501350	162501405	100	+	.	Parent=FBgn0025393.1.mrna1;Target=FBgn0025393.1 368 423 +
Chr1	stalkie_big_nohaplotig	CDS	162498759	162498951	.	+	0	Parent=FBgn0025393.1.mrna1;Target=FBgn0025393.1 10 196 +
Chr1	stalkie_big_nohaplotig	CDS	162499052	162499222	.	+	2	Parent=FBgn0025393.1.mrna1;Target=FBgn0025393.1 197 367 +
Chr1	stalkie_big_nohaplotig	CDS	162501350	162501405	.	+	2	Parent=FBgn0025393.1.mrna1;Target=FBgn0025393.1 368 423 +
Chr1	gffcl	locus	162499303	162499523	.	+	.	ID=RLOC_00013250;geneIDs=comp138479_c0_seq1.path1;transcripts=comp138479_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162499303	162499523	.	+	.	ID=comp138479_c0_seq1.mrna1;geneID=comp138479_c0_seq1.path1;Name=comp138479_c0_seq1;Dir=indeterminatecoverage=77.5;identity=98.6;matches=218;mismatches=3;indels=0;unknowns=0;Target=comp138479_c0_seq1 222 2 .;CDS_Target=comp138479_c0_seq1 121 2 .;locus=RLOC_00013250
Chr1	stalkie_big_nohaplotig	exon	162499303	162499523	98	+	.	Parent=comp138479_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162499303	162499422	.	+	0	Parent=comp138479_c0_seq1.mrna1
Chr1	gffcl	locus	162527261	162528169	.	-	.	ID=RLOC_00013251;geneIDs=FBgn0032906.1.path1;transcripts=FBgn0032906.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162527261	162528169	.	-	.	ID=FBgn0032906.1.mrna1;geneID=FBgn0032906.1.path1;Name=FBgn0032906.1;Dir=sensecoverage=100.0;identity=98.5;matches=730;mismatches=8;indels=3;unknowns=0;locus=RLOC_00013251
Chr1	stalkie_big_nohaplotig	exon	162527261	162527336	100	-	.	Parent=FBgn0032906.1.mrna1;Target=FBgn0032906.1 666 741 +
Chr1	stalkie_big_nohaplotig	exon	162527399	162527961	99	-	.	Parent=FBgn0032906.1.mrna1;Target=FBgn0032906.1 103 665 +
Chr1	stalkie_big_nohaplotig	exon	162528018	162528082	91	-	.	Parent=FBgn0032906.1.mrna1;Target=FBgn0032906.1 35 102 +
Chr1	stalkie_big_nohaplotig	exon	162528136	162528169	100	-	.	Parent=FBgn0032906.1.mrna1;Target=FBgn0032906.1 1 34 +
Chr1	stalkie_big_nohaplotig	CDS	162527261	162527336	.	-	1	Parent=FBgn0032906.1.mrna1;Target=FBgn0032906.1 666 741 +
Chr1	stalkie_big_nohaplotig	CDS	162527399	162527961	.	-	0	Parent=FBgn0032906.1.mrna1;Target=FBgn0032906.1 103 665 +
Chr1	stalkie_big_nohaplotig	CDS	162528018	162528082	.	-	2	Parent=FBgn0032906.1.mrna1;Target=FBgn0032906.1 35 102 +
Chr1	stalkie_big_nohaplotig	CDS	162528136	162528169	.	-	0	Parent=FBgn0032906.1.mrna1;Target=FBgn0032906.1 1 34 +
Chr1	gffcl	locus	162529189	162530022	.	+	.	ID=RLOC_00013252;geneIDs=FBgn0260747.1.path1;transcripts=FBgn0260747.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162529189	162530022	.	+	.	ID=FBgn0260747.1.mrna1;geneID=FBgn0260747.1.path1;Name=FBgn0260747.1;Dir=sensecoverage=100.0;identity=100.0;matches=486;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013252
Chr1	stalkie_big_nohaplotig	exon	162529189	162529241	100	+	.	Parent=FBgn0260747.1.mrna1;Target=FBgn0260747.1 1 53 +
Chr1	stalkie_big_nohaplotig	exon	162529528	162529702	100	+	.	Parent=FBgn0260747.1.mrna1;Target=FBgn0260747.1 54 228 +
Chr1	stalkie_big_nohaplotig	exon	162529765	162530022	100	+	.	Parent=FBgn0260747.1.mrna1;Target=FBgn0260747.1 229 486 +
Chr1	stalkie_big_nohaplotig	CDS	162529189	162529241	.	+	0	Parent=FBgn0260747.1.mrna1;Target=FBgn0260747.1 1 53 +
Chr1	stalkie_big_nohaplotig	CDS	162529528	162529702	.	+	1	Parent=FBgn0260747.1.mrna1;Target=FBgn0260747.1 54 228 +
Chr1	stalkie_big_nohaplotig	CDS	162529765	162530022	.	+	0	Parent=FBgn0260747.1.mrna1;Target=FBgn0260747.1 229 486 +
Chr1	gffcl	locus	162531695	162536623	.	-	.	ID=RLOC_00013253;geneIDs=FBgn0028974.1.path1;transcripts=FBgn0028974.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162531695	162536623	.	-	.	ID=FBgn0028974.1.mrna1;geneID=FBgn0028974.1.path1;Name=FBgn0028974.1;Dir=sensecoverage=100.0;identity=99.5;matches=4732;mismatches=26;indels=0;unknowns=0;locus=RLOC_00013253
Chr1	stalkie_big_nohaplotig	exon	162531695	162534910	99	-	.	Parent=FBgn0028974.1.mrna1;Target=FBgn0028974.1 1543 4758 +
Chr1	stalkie_big_nohaplotig	exon	162534964	162535937	99	-	.	Parent=FBgn0028974.1.mrna1;Target=FBgn0028974.1 569 1542 +
Chr1	stalkie_big_nohaplotig	exon	162536001	162536512	100	-	.	Parent=FBgn0028974.1.mrna1;Target=FBgn0028974.1 57 568 +
Chr1	stalkie_big_nohaplotig	exon	162536568	162536623	100	-	.	Parent=FBgn0028974.1.mrna1;Target=FBgn0028974.1 1 56 +
Chr1	stalkie_big_nohaplotig	CDS	162531695	162534910	.	-	0	Parent=FBgn0028974.1.mrna1;Target=FBgn0028974.1 1543 4758 +
Chr1	stalkie_big_nohaplotig	CDS	162534964	162535937	.	-	2	Parent=FBgn0028974.1.mrna1;Target=FBgn0028974.1 569 1542 +
Chr1	stalkie_big_nohaplotig	CDS	162536001	162536512	.	-	1	Parent=FBgn0028974.1.mrna1;Target=FBgn0028974.1 57 568 +
Chr1	stalkie_big_nohaplotig	CDS	162536568	162536623	.	-	0	Parent=FBgn0028974.1.mrna1;Target=FBgn0028974.1 1 56 +
Chr1	gffcl	locus	162538112	162538407	.	-	.	ID=RLOC_00013254;geneIDs=comp137582_c0_seq1.path1;transcripts=comp137582_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162538112	162538407	.	-	.	ID=comp137582_c0_seq1.mrna1;geneID=comp137582_c0_seq1.path1;Name=comp137582_c0_seq1;Dir=indeterminatecoverage=99.1;identity=90.8;matches=287;mismatches=9;indels=20;unknowns=0;Target=comp137582_c0_seq1 318 3 .;CDS_Target=comp137582_c0_seq1 62 3 .;locus=RLOC_00013254
Chr1	stalkie_big_nohaplotig	exon	162538112	162538407	90	-	.	Parent=comp137582_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162538348	162538407	.	-	0	Parent=comp137582_c0_seq1.mrna1
Chr1	gffcl	locus	162538751	162578600	.	-	.	ID=RLOC_00013255;geneIDs=FBgn0030780.1.path1;transcripts=FBgn0030780.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162538751	162578600	.	-	.	ID=FBgn0030780.1.mrna1;geneID=FBgn0030780.1.path1;Name=FBgn0030780.1;Dir=sensecoverage=100.0;identity=99.4;matches=4310;mismatches=28;indels=0;unknowns=0;locus=RLOC_00013255
Chr1	stalkie_big_nohaplotig	exon	162538751	162538856	100	-	.	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 4233 4338 +
Chr1	stalkie_big_nohaplotig	exon	162538920	162539330	99	-	.	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 3822 4232 +
Chr1	stalkie_big_nohaplotig	exon	162549731	162551003	99	-	.	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 2549 3821 +
Chr1	stalkie_big_nohaplotig	exon	162552946	162553072	99	-	.	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 2422 2548 +
Chr1	stalkie_big_nohaplotig	exon	162575364	162575537	100	-	.	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 2248 2421 +
Chr1	stalkie_big_nohaplotig	exon	162575603	162575767	99	-	.	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 2083 2247 +
Chr1	stalkie_big_nohaplotig	exon	162576113	162576235	98	-	.	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 1960 2082 +
Chr1	stalkie_big_nohaplotig	exon	162576298	162576630	99	-	.	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 1627 1959 +
Chr1	stalkie_big_nohaplotig	exon	162576693	162576810	99	-	.	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 1509 1626 +
Chr1	stalkie_big_nohaplotig	exon	162576868	162577316	99	-	.	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 1060 1508 +
Chr1	stalkie_big_nohaplotig	exon	162577395	162577502	98	-	.	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 952 1059 +
Chr1	stalkie_big_nohaplotig	exon	162577577	162578407	99	-	.	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 121 951 +
Chr1	stalkie_big_nohaplotig	exon	162578481	162578600	100	-	.	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 1 120 +
Chr1	stalkie_big_nohaplotig	CDS	162538751	162538856	.	-	1	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 4233 4338 +
Chr1	stalkie_big_nohaplotig	CDS	162538920	162539330	.	-	1	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 3822 4232 +
Chr1	stalkie_big_nohaplotig	CDS	162549731	162551003	.	-	2	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 2549 3821 +
Chr1	stalkie_big_nohaplotig	CDS	162552946	162553072	.	-	0	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 2422 2548 +
Chr1	stalkie_big_nohaplotig	CDS	162575364	162575537	.	-	0	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 2248 2421 +
Chr1	stalkie_big_nohaplotig	CDS	162575603	162575767	.	-	0	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 2083 2247 +
Chr1	stalkie_big_nohaplotig	CDS	162576113	162576235	.	-	0	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 1960 2082 +
Chr1	stalkie_big_nohaplotig	CDS	162576298	162576630	.	-	0	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 1627 1959 +
Chr1	stalkie_big_nohaplotig	CDS	162576693	162576810	.	-	1	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 1509 1626 +
Chr1	stalkie_big_nohaplotig	CDS	162576868	162577316	.	-	0	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 1060 1508 +
Chr1	stalkie_big_nohaplotig	CDS	162577395	162577502	.	-	0	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 952 1059 +
Chr1	stalkie_big_nohaplotig	CDS	162577577	162578407	.	-	0	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 121 951 +
Chr1	stalkie_big_nohaplotig	CDS	162578481	162578600	.	-	0	Parent=FBgn0030780.1.mrna1;Target=FBgn0030780.1 1 120 +
Chr1	gffcl	locus	162552033	162552075	.	-	.	ID=RLOC_00013256;geneIDs=comp344234_c0_seq1.path1;transcripts=comp344234_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162552033	162552075	.	-	.	ID=comp344234_c0_seq1.mrna1;geneID=comp344234_c0_seq1.path1;Name=comp344234_c0_seq1;Dir=indeterminatecoverage=9.5;identity=100.0;matches=43;mismatches=0;indels=0;unknowns=0;Target=comp344234_c0_seq1 43 1 .;CDS_Target=comp344234_c0_seq1 43 2 .;locus=RLOC_00013256
Chr1	stalkie_big_nohaplotig	exon	162552033	162552075	100	-	.	Parent=comp344234_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162552033	162552074	.	-	0	Parent=comp344234_c0_seq1.mrna1
Chr1	gffcl	locus	162553379	162571117	.	+	.	ID=RLOC_00013257;geneIDs=FBgn0085354.1.path1;transcripts=FBgn0085354.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162553379	162571117	.	+	.	ID=FBgn0085354.1.mrna1;geneID=FBgn0085354.1.path1;Name=FBgn0085354.1;Dir=sensecoverage=100.0;identity=99.6;matches=553;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013257
Chr1	stalkie_big_nohaplotig	exon	162553379	162553405	100	+	.	Parent=FBgn0085354.1.mrna1;Target=FBgn0085354.1 1 27 +
Chr1	stalkie_big_nohaplotig	exon	162562707	162562925	99	+	.	Parent=FBgn0085354.1.mrna1;Target=FBgn0085354.1 28 246 +
Chr1	stalkie_big_nohaplotig	exon	162570738	162570971	100	+	.	Parent=FBgn0085354.1.mrna1;Target=FBgn0085354.1 247 480 +
Chr1	stalkie_big_nohaplotig	exon	162571043	162571117	100	+	.	Parent=FBgn0085354.1.mrna1;Target=FBgn0085354.1 481 555 +
Chr1	stalkie_big_nohaplotig	CDS	162553379	162553405	.	+	0	Parent=FBgn0085354.1.mrna1;Target=FBgn0085354.1 1 27 +
Chr1	stalkie_big_nohaplotig	CDS	162562707	162562925	.	+	0	Parent=FBgn0085354.1.mrna1;Target=FBgn0085354.1 28 246 +
Chr1	stalkie_big_nohaplotig	CDS	162570738	162570971	.	+	0	Parent=FBgn0085354.1.mrna1;Target=FBgn0085354.1 247 480 +
Chr1	stalkie_big_nohaplotig	CDS	162571043	162571117	.	+	0	Parent=FBgn0085354.1.mrna1;Target=FBgn0085354.1 481 555 +
Chr1	gffcl	locus	162581477	162581861	.	+	.	ID=RLOC_00013258;geneIDs=comp147851_c0_seq1.path1;transcripts=comp147851_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162581477	162581861	.	+	.	ID=comp147851_c0_seq1.mrna1;geneID=comp147851_c0_seq1.path1;Name=comp147851_c0_seq1;Dir=indeterminatecoverage=79.5;identity=97.7;matches=376;mismatches=9;indels=0;unknowns=0;Target=comp147851_c0_seq1 476 92 .;CDS_Target=comp147851_c0_seq1 241 194 .;locus=RLOC_00013258
Chr1	stalkie_big_nohaplotig	exon	162581477	162581861	97	+	.	Parent=comp147851_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162581579	162581626	.	+	0	Parent=comp147851_c0_seq1.mrna1
Chr1	gffcl	locus	162581951	162617319	.	-	.	ID=RLOC_00013259;geneIDs=FBgn0030778.1.path1,comp163084_c0_seq1.path1;transcripts=comp163084_c0_seq1.mrna1,FBgn0030778.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162581951	162617319	.	-	.	ID=comp163084_c0_seq1.mrna1;geneID=comp163084_c0_seq1.path1;Name=comp163084_c0_seq1;Dir=antisensecoverage=98.8;identity=97.8;matches=3149;mismatches=31;indels=41;unknowns=0;locus=RLOC_00013259
Chr1	stalkie_big_nohaplotig	exon	162581951	162582439	98	-	.	Parent=comp163084_c0_seq1.mrna1;Target=comp163084_c0_seq1 41 529 -
Chr1	stalkie_big_nohaplotig	exon	162582449	162583162	93	-	.	Parent=comp163084_c0_seq1.mrna1;Target=comp163084_c0_seq1 640 1312 -
Chr1	stalkie_big_nohaplotig	exon	162584644	162584968	100	-	.	Parent=comp163084_c0_seq1.mrna1;Target=comp163084_c0_seq1 1313 1637 -
Chr1	stalkie_big_nohaplotig	exon	162585137	162585229	100	-	.	Parent=comp163084_c0_seq1.mrna1;Target=comp163084_c0_seq1 1638 1730 -
Chr1	stalkie_big_nohaplotig	exon	162585293	162585469	98	-	.	Parent=comp163084_c0_seq1.mrna1;Target=comp163084_c0_seq1 1731 1907 -
Chr1	stalkie_big_nohaplotig	exon	162585527	162585822	98	-	.	Parent=comp163084_c0_seq1.mrna1;Target=comp163084_c0_seq1 1908 2203 -
Chr1	stalkie_big_nohaplotig	exon	162585979	162586020	100	-	.	Parent=comp163084_c0_seq1.mrna1;Target=comp163084_c0_seq1 2204 2245 -
Chr1	stalkie_big_nohaplotig	exon	162586367	162586554	97	-	.	Parent=comp163084_c0_seq1.mrna1;Target=comp163084_c0_seq1 2246 2433 -
Chr1	stalkie_big_nohaplotig	exon	162586676	162586892	98	-	.	Parent=comp163084_c0_seq1.mrna1;Target=comp163084_c0_seq1 2434 2650 -
Chr1	stalkie_big_nohaplotig	exon	162586969	162587084	99	-	.	Parent=comp163084_c0_seq1.mrna1;Target=comp163084_c0_seq1 2651 2766 -
Chr1	stalkie_big_nohaplotig	exon	162587162	162587358	98	-	.	Parent=comp163084_c0_seq1.mrna1;Target=comp163084_c0_seq1 2767 2963 -
Chr1	stalkie_big_nohaplotig	exon	162616953	162617319	99	-	.	Parent=comp163084_c0_seq1.mrna1;Target=comp163084_c0_seq1 2964 3330 -
Chr1	stalkie_big_nohaplotig	CDS	162584888	162584968	.	-	0	Parent=comp163084_c0_seq1.mrna1;Target=comp163084_c0_seq1 1557 1637 .
Chr1	stalkie_big_nohaplotig	CDS	162585137	162585229	.	-	0	Parent=comp163084_c0_seq1.mrna1;Target=comp163084_c0_seq1 1638 1730 .
Chr1	stalkie_big_nohaplotig	CDS	162585293	162585469	.	-	0	Parent=comp163084_c0_seq1.mrna1;Target=comp163084_c0_seq1 1731 1907 .
Chr1	stalkie_big_nohaplotig	CDS	162585527	162585822	.	-	2	Parent=comp163084_c0_seq1.mrna1;Target=comp163084_c0_seq1 1908 2203 .
Chr1	stalkie_big_nohaplotig	CDS	162585979	162586020	.	-	2	Parent=comp163084_c0_seq1.mrna1;Target=comp163084_c0_seq1 2204 2245 .
Chr1	stalkie_big_nohaplotig	CDS	162586367	162586554	.	-	1	Parent=comp163084_c0_seq1.mrna1;Target=comp163084_c0_seq1 2246 2433 .
Chr1	stalkie_big_nohaplotig	CDS	162586676	162586892	.	-	2	Parent=comp163084_c0_seq1.mrna1;Target=comp163084_c0_seq1 2434 2650 .
Chr1	stalkie_big_nohaplotig	CDS	162586969	162587084	.	-	1	Parent=comp163084_c0_seq1.mrna1;Target=comp163084_c0_seq1 2651 2766 .
Chr1	stalkie_big_nohaplotig	CDS	162587162	162587340	.	-	0	Parent=comp163084_c0_seq1.mrna1;Target=comp163084_c0_seq1 2767 2945 .
Chr1	stalkie_big_nohaplotig	mRNA	162583022	162587343	.	-	.	ID=FBgn0030778.1.mrna1;geneID=FBgn0030778.1.path1;Name=FBgn0030778.1;Dir=sensecoverage=100.0;identity=98.9;matches=1436;mismatches=16;indels=0;unknowns=0;locus=RLOC_00013259
Chr1	stalkie_big_nohaplotig	exon	162583022	162583162	99	-	.	Parent=FBgn0030778.1.mrna1;Target=FBgn0030778.1 1312 1452 +
Chr1	stalkie_big_nohaplotig	exon	162585137	162585229	100	-	.	Parent=FBgn0030778.1.mrna1;Target=FBgn0030778.1 1219 1311 +
Chr1	stalkie_big_nohaplotig	exon	162585293	162585469	98	-	.	Parent=FBgn0030778.1.mrna1;Target=FBgn0030778.1 1042 1218 +
Chr1	stalkie_big_nohaplotig	exon	162585527	162585822	98	-	.	Parent=FBgn0030778.1.mrna1;Target=FBgn0030778.1 746 1041 +
Chr1	stalkie_big_nohaplotig	exon	162585979	162586020	100	-	.	Parent=FBgn0030778.1.mrna1;Target=FBgn0030778.1 704 745 +
Chr1	stalkie_big_nohaplotig	exon	162586367	162586554	97	-	.	Parent=FBgn0030778.1.mrna1;Target=FBgn0030778.1 516 703 +
Chr1	stalkie_big_nohaplotig	exon	162586676	162586892	98	-	.	Parent=FBgn0030778.1.mrna1;Target=FBgn0030778.1 299 515 +
Chr1	stalkie_big_nohaplotig	exon	162586969	162587084	99	-	.	Parent=FBgn0030778.1.mrna1;Target=FBgn0030778.1 183 298 +
Chr1	stalkie_big_nohaplotig	exon	162587162	162587343	99	-	.	Parent=FBgn0030778.1.mrna1;Target=FBgn0030778.1 1 182 +
Chr1	stalkie_big_nohaplotig	CDS	162583022	162583162	.	-	0	Parent=FBgn0030778.1.mrna1;Target=FBgn0030778.1 1312 1452 +
Chr1	stalkie_big_nohaplotig	CDS	162585137	162585229	.	-	0	Parent=FBgn0030778.1.mrna1;Target=FBgn0030778.1 1219 1311 +
Chr1	stalkie_big_nohaplotig	CDS	162585293	162585469	.	-	0	Parent=FBgn0030778.1.mrna1;Target=FBgn0030778.1 1042 1218 +
Chr1	stalkie_big_nohaplotig	CDS	162585527	162585822	.	-	2	Parent=FBgn0030778.1.mrna1;Target=FBgn0030778.1 746 1041 +
Chr1	stalkie_big_nohaplotig	CDS	162585979	162586020	.	-	2	Parent=FBgn0030778.1.mrna1;Target=FBgn0030778.1 704 745 +
Chr1	stalkie_big_nohaplotig	CDS	162586367	162586554	.	-	1	Parent=FBgn0030778.1.mrna1;Target=FBgn0030778.1 516 703 +
Chr1	stalkie_big_nohaplotig	CDS	162586676	162586892	.	-	2	Parent=FBgn0030778.1.mrna1;Target=FBgn0030778.1 299 515 +
Chr1	stalkie_big_nohaplotig	CDS	162586969	162587084	.	-	1	Parent=FBgn0030778.1.mrna1;Target=FBgn0030778.1 183 298 +
Chr1	stalkie_big_nohaplotig	CDS	162587162	162587343	.	-	0	Parent=FBgn0030778.1.mrna1;Target=FBgn0030778.1 1 182 +
Chr1	gffcl	locus	162589386	162590205	.	+	.	ID=RLOC_00013260;geneIDs=FBgn0030777.2.path1;transcripts=FBgn0030777.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162589386	162590205	.	+	.	ID=FBgn0030777.2.mrna1;geneID=FBgn0030777.2.path1;Name=FBgn0030777.2;Dir=sensecoverage=100.0;identity=99.6;matches=762;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013260
Chr1	stalkie_big_nohaplotig	exon	162589386	162589624	100	+	.	Parent=FBgn0030777.2.mrna1;Target=FBgn0030777.2 1 239 +
Chr1	stalkie_big_nohaplotig	exon	162589680	162590205	99	+	.	Parent=FBgn0030777.2.mrna1;Target=FBgn0030777.2 240 765 +
Chr1	stalkie_big_nohaplotig	CDS	162589386	162589624	.	+	0	Parent=FBgn0030777.2.mrna1;Target=FBgn0030777.2 1 239 +
Chr1	stalkie_big_nohaplotig	CDS	162589680	162590205	.	+	1	Parent=FBgn0030777.2.mrna1;Target=FBgn0030777.2 240 765 +
Chr1	gffcl	locus	162594917	162595698	.	+	.	ID=RLOC_00013261;geneIDs=FBgn0030777.1.path1;transcripts=FBgn0030777.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162594917	162595698	.	+	.	ID=FBgn0030777.1.mrna1;geneID=FBgn0030777.1.path1;Name=FBgn0030777.1;Dir=sensecoverage=100.0;identity=100.0;matches=711;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013261
Chr1	stalkie_big_nohaplotig	exon	162594917	162595155	100	+	.	Parent=FBgn0030777.1.mrna1;Target=FBgn0030777.1 1 239 +
Chr1	stalkie_big_nohaplotig	exon	162595227	162595698	100	+	.	Parent=FBgn0030777.1.mrna1;Target=FBgn0030777.1 240 711 +
Chr1	stalkie_big_nohaplotig	CDS	162594917	162595155	.	+	0	Parent=FBgn0030777.1.mrna1;Target=FBgn0030777.1 1 239 +
Chr1	stalkie_big_nohaplotig	CDS	162595227	162595698	.	+	1	Parent=FBgn0030777.1.mrna1;Target=FBgn0030777.1 240 711 +
Chr1	gffcl	locus	162595901	162596740	.	-	.	ID=RLOC_00013262;geneIDs=FBgn0011834.1.path1;transcripts=FBgn0011834.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162595901	162596740	.	-	.	ID=FBgn0011834.1.mrna1;geneID=FBgn0011834.1.path1;Name=FBgn0011834.1;Dir=sensecoverage=99.9;identity=99.6;matches=770;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013262
Chr1	stalkie_big_nohaplotig	exon	162595901	162596420	99	-	.	Parent=FBgn0011834.1.mrna1;Target=FBgn0011834.1 255 774 +
Chr1	stalkie_big_nohaplotig	exon	162596488	162596740	99	-	.	Parent=FBgn0011834.1.mrna1;Target=FBgn0011834.1 2 254 +
Chr1	stalkie_big_nohaplotig	CDS	162595901	162596420	.	-	1	Parent=FBgn0011834.1.mrna1;Target=FBgn0011834.1 255 774 +
Chr1	stalkie_big_nohaplotig	CDS	162596488	162596738	.	-	0	Parent=FBgn0011834.1.mrna1;Target=FBgn0011834.1 4 254 +
Chr1	gffcl	locus	162598547	162599326	.	+	.	ID=RLOC_00013263;geneIDs=FBgn0030775.1.path1;transcripts=FBgn0030775.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162598547	162599326	.	+	.	ID=FBgn0030775.1.mrna1;geneID=FBgn0030775.1.path1;Name=FBgn0030775.1;Dir=sensecoverage=100.0;identity=99.1;matches=657;mismatches=5;indels=1;unknowns=0;locus=RLOC_00013263
Chr1	stalkie_big_nohaplotig	exon	162598547	162598688	99	+	.	Parent=FBgn0030775.1.mrna1;Target=FBgn0030775.1 1 143 +
Chr1	stalkie_big_nohaplotig	exon	162598807	162599326	99	+	.	Parent=FBgn0030775.1.mrna1;Target=FBgn0030775.1 144 663 +
Chr1	stalkie_big_nohaplotig	CDS	162598549	162598688	.	+	0	Parent=FBgn0030775.1.mrna1;Target=FBgn0030775.1 3 143 +
Chr1	stalkie_big_nohaplotig	CDS	162598807	162598812	.	+	1	Parent=FBgn0030775.1.mrna1;Target=FBgn0030775.1 144 149 +
Chr1	gffcl	locus	162601045	162601856	.	+	.	ID=RLOC_00013264;geneIDs=FBgn0030774.1.path1;transcripts=FBgn0030774.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162601045	162601856	.	+	.	ID=FBgn0030774.1.mrna1;geneID=FBgn0030774.1.path1;Name=FBgn0030774.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=746;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013264
Chr1	stalkie_big_nohaplotig	exon	162601045	162601271	100	+	.	Parent=FBgn0030774.1.mrna1;Target=FBgn0030774.1 227 1 .
Chr1	stalkie_big_nohaplotig	exon	162601337	162601856	99	+	.	Parent=FBgn0030774.1.mrna1;Target=FBgn0030774.1 747 228 .
Chr1	stalkie_big_nohaplotig	CDS	162601045	162601271	.	+	0	Parent=FBgn0030774.1.mrna1;Target=FBgn0030774.1 227 1 .
Chr1	stalkie_big_nohaplotig	CDS	162601337	162601856	.	+	1	Parent=FBgn0030774.1.mrna1;Target=FBgn0030774.1 747 228 .
Chr1	gffcl	locus	162602927	162603790	.	+	.	ID=RLOC_00013265;geneIDs=FBgn0011834.2.path1;transcripts=FBgn0011834.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162602927	162603790	.	+	.	ID=FBgn0011834.2.mrna1;geneID=FBgn0011834.2.path1;Name=FBgn0011834.2;Dir=sensecoverage=100.0;identity=99.6;matches=798;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013265
Chr1	stalkie_big_nohaplotig	exon	162602927	162603204	99	+	.	Parent=FBgn0011834.2.mrna1;Target=FBgn0011834.2 1 278 +
Chr1	stalkie_big_nohaplotig	exon	162603268	162603790	99	+	.	Parent=FBgn0011834.2.mrna1;Target=FBgn0011834.2 279 801 +
Chr1	stalkie_big_nohaplotig	CDS	162602927	162603204	.	+	0	Parent=FBgn0011834.2.mrna1;Target=FBgn0011834.2 1 278 +
Chr1	stalkie_big_nohaplotig	CDS	162603268	162603790	.	+	1	Parent=FBgn0011834.2.mrna1;Target=FBgn0011834.2 279 801 +
Chr1	gffcl	locus	162605223	162606060	.	+	.	ID=RLOC_00013266;geneIDs=FBgn0031141.1.path1;transcripts=FBgn0031141.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162605223	162606060	.	+	.	ID=FBgn0031141.1.mrna1;geneID=FBgn0031141.1.path1;Name=FBgn0031141.1;Dir=sensecoverage=97.5;identity=99.6;matches=778;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013266
Chr1	stalkie_big_nohaplotig	exon	162605223	162605480	99	+	.	Parent=FBgn0031141.1.mrna1;Target=FBgn0031141.1 21 278 +
Chr1	stalkie_big_nohaplotig	exon	162605538	162606060	99	+	.	Parent=FBgn0031141.1.mrna1;Target=FBgn0031141.1 279 801 +
Chr1	stalkie_big_nohaplotig	CDS	162605224	162605480	.	+	0	Parent=FBgn0031141.1.mrna1;Target=FBgn0031141.1 22 278 +
Chr1	stalkie_big_nohaplotig	CDS	162605538	162606060	.	+	1	Parent=FBgn0031141.1.mrna1;Target=FBgn0031141.1 279 801 +
Chr1	gffcl	locus	162606885	162607733	.	+	.	ID=RLOC_00013267;geneIDs=FBgn0011834.3.path1;transcripts=FBgn0011834.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162606885	162607733	.	+	.	ID=FBgn0011834.3.mrna1;geneID=FBgn0011834.3.path1;Name=FBgn0011834.3;Dir=sensecoverage=100.0;identity=99.0;matches=772;mismatches=8;indels=0;unknowns=0;locus=RLOC_00013267
Chr1	stalkie_big_nohaplotig	exon	162606885	162607141	99	+	.	Parent=FBgn0011834.3.mrna1;Target=FBgn0011834.3 1 257 +
Chr1	stalkie_big_nohaplotig	exon	162607211	162607733	98	+	.	Parent=FBgn0011834.3.mrna1;Target=FBgn0011834.3 258 780 +
Chr1	stalkie_big_nohaplotig	CDS	162606885	162607141	.	+	0	Parent=FBgn0011834.3.mrna1;Target=FBgn0011834.3 1 257 +
Chr1	stalkie_big_nohaplotig	CDS	162607211	162607733	.	+	1	Parent=FBgn0011834.3.mrna1;Target=FBgn0011834.3 258 780 +
Chr1	gffcl	locus	162624143	162625878	.	-	.	ID=RLOC_00013268;geneIDs=comp156946_c4_seq1.path1;transcripts=comp156946_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162624143	162625878	.	-	.	ID=comp156946_c4_seq1.mrna1;geneID=comp156946_c4_seq1.path1;Name=comp156946_c4_seq1;Dir=indeterminatecoverage=99.9;identity=95.6;matches=1666;mismatches=23;indels=53;unknowns=0;Target=comp156946_c4_seq1 1696 2 .;CDS_Target=comp156946_c4_seq1 1108 974 .;locus=RLOC_00013268
Chr1	stalkie_big_nohaplotig	exon	162624143	162625878	95	-	.	Parent=comp156946_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162624778	162624908	.	-	0	Parent=comp156946_c4_seq1.mrna1
Chr1	gffcl	locus	162645355	162645574	.	+	.	ID=RLOC_00013270;geneIDs=comp151967_c3_seq1.path1;transcripts=comp151967_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162645355	162645574	.	+	.	ID=comp151967_c3_seq1.mrna1;geneID=comp151967_c3_seq1.path1;Name=comp151967_c3_seq1;Dir=indeterminatecoverage=95.7;identity=99.5;matches=219;mismatches=1;indels=0;unknowns=0;Target=comp151967_c3_seq1 220 1 .;CDS_Target=comp151967_c3_seq1 34 2 .;locus=RLOC_00013270
Chr1	stalkie_big_nohaplotig	exon	162645355	162645574	99	+	.	Parent=comp151967_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162645356	162645388	.	+	0	Parent=comp151967_c3_seq1.mrna1
Chr1	gffcl	locus	162649547	162655201	.	+	.	ID=RLOC_00013271;geneIDs=FBgn0029580.1.path1;transcripts=FBgn0029580.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162649547	162655201	.	+	.	ID=FBgn0029580.1.mrna1;geneID=FBgn0029580.1.path1;Name=FBgn0029580.1;Dir=sensecoverage=100.0;identity=99.3;matches=694;mismatches=5;indels=0;unknowns=0;locus=RLOC_00013271
Chr1	stalkie_big_nohaplotig	exon	162649547	162649656	100	+	.	Parent=FBgn0029580.1.mrna1;Target=FBgn0029580.1 1 110 +
Chr1	stalkie_big_nohaplotig	exon	162653686	162653849	100	+	.	Parent=FBgn0029580.1.mrna1;Target=FBgn0029580.1 111 274 +
Chr1	stalkie_big_nohaplotig	exon	162653911	162653994	98	+	.	Parent=FBgn0029580.1.mrna1;Target=FBgn0029580.1 275 358 +
Chr1	stalkie_big_nohaplotig	exon	162654058	162654239	98	+	.	Parent=FBgn0029580.1.mrna1;Target=FBgn0029580.1 359 540 +
Chr1	stalkie_big_nohaplotig	exon	162655043	162655201	98	+	.	Parent=FBgn0029580.1.mrna1;Target=FBgn0029580.1 541 699 +
Chr1	stalkie_big_nohaplotig	CDS	162649547	162649656	.	+	0	Parent=FBgn0029580.1.mrna1;Target=FBgn0029580.1 1 110 +
Chr1	stalkie_big_nohaplotig	CDS	162653686	162653849	.	+	1	Parent=FBgn0029580.1.mrna1;Target=FBgn0029580.1 111 274 +
Chr1	stalkie_big_nohaplotig	CDS	162653911	162653994	.	+	2	Parent=FBgn0029580.1.mrna1;Target=FBgn0029580.1 275 358 +
Chr1	stalkie_big_nohaplotig	CDS	162654058	162654239	.	+	2	Parent=FBgn0029580.1.mrna1;Target=FBgn0029580.1 359 540 +
Chr1	stalkie_big_nohaplotig	CDS	162655043	162655201	.	+	0	Parent=FBgn0029580.1.mrna1;Target=FBgn0029580.1 541 699 +
Chr1	gffcl	locus	162650052	162650827	.	+	.	ID=RLOC_00013272;geneIDs=FBgn0026872.1.path1;transcripts=FBgn0026872.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162650052	162650827	.	+	.	ID=FBgn0026872.1.mrna1;geneID=FBgn0026872.1.path1;Name=FBgn0026872.1;Dir=sensecoverage=100.0;identity=99.8;matches=572;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013272
Chr1	stalkie_big_nohaplotig	exon	162650052	162650202	100	+	.	Parent=FBgn0026872.1.mrna1;Target=FBgn0026872.1 1 151 +
Chr1	stalkie_big_nohaplotig	exon	162650284	162650417	100	+	.	Parent=FBgn0026872.1.mrna1;Target=FBgn0026872.1 152 285 +
Chr1	stalkie_big_nohaplotig	exon	162650479	162650610	100	+	.	Parent=FBgn0026872.1.mrna1;Target=FBgn0026872.1 286 417 +
Chr1	stalkie_big_nohaplotig	exon	162650672	162650827	99	+	.	Parent=FBgn0026872.1.mrna1;Target=FBgn0026872.1 418 573 +
Chr1	stalkie_big_nohaplotig	CDS	162650052	162650202	.	+	0	Parent=FBgn0026872.1.mrna1;Target=FBgn0026872.1 1 151 +
Chr1	stalkie_big_nohaplotig	CDS	162650284	162650417	.	+	2	Parent=FBgn0026872.1.mrna1;Target=FBgn0026872.1 152 285 +
Chr1	stalkie_big_nohaplotig	CDS	162650479	162650610	.	+	0	Parent=FBgn0026872.1.mrna1;Target=FBgn0026872.1 286 417 +
Chr1	stalkie_big_nohaplotig	CDS	162650672	162650827	.	+	0	Parent=FBgn0026872.1.mrna1;Target=FBgn0026872.1 418 573 +
Chr1	gffcl	locus	162650968	162651880	.	+	.	ID=RLOC_00013273;geneIDs=comp160831_c2_seq1.path1;transcripts=comp160831_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162650968	162651880	.	+	.	ID=comp160831_c2_seq1.mrna1;geneID=comp160831_c2_seq1.path1;Name=comp160831_c2_seq1;Dir=indeterminatecoverage=97.7;identity=93.8;matches=900;mismatches=13;indels=47;unknowns=0;Target=comp160831_c2_seq1 961 2 .;CDS_Target=comp160831_c2_seq1 407 174 .;locus=RLOC_00013273
Chr1	stalkie_big_nohaplotig	exon	162650968	162651880	93	+	.	Parent=comp160831_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162651138	162651353	.	+	0	Parent=comp160831_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162653473	162694822	.	+	.	ID=comp117844_c0_seq1.mrna2;geneID=comp117844_c0_seq1.path2;Name=comp117844_c0_seq1;Dir=indeterminatecoverage=58.9;identity=99.7;matches=356;mismatches=1;indels=0;unknowns=0;Target=comp117844_c0_seq1 476 426 .;locus=RLOC_00013274
Chr1	stalkie_big_nohaplotig	exon	162653473	162653482	100	+	.	Parent=comp117844_c0_seq1.mrna2;Target=comp117844_c0_seq1 259 250 .
Chr1	stalkie_big_nohaplotig	exon	162655986	162655992	100	+	.	Parent=comp117844_c0_seq1.mrna2;Target=comp117844_c0_seq1 266 260 .
Chr1	stalkie_big_nohaplotig	exon	162662008	162662015	100	+	.	Parent=comp117844_c0_seq1.mrna2;Target=comp117844_c0_seq1 274 267 .
Chr1	stalkie_big_nohaplotig	exon	162668935	162668937	100	+	.	Parent=comp117844_c0_seq1.mrna2;Target=comp117844_c0_seq1 277 275 .
Chr1	stalkie_big_nohaplotig	exon	162681253	162681258	100	+	.	Parent=comp117844_c0_seq1.mrna2;Target=comp117844_c0_seq1 283 278 .
Chr1	stalkie_big_nohaplotig	exon	162685331	162685333	100	+	.	Parent=comp117844_c0_seq1.mrna2;Target=comp117844_c0_seq1 286 284 .
Chr1	stalkie_big_nohaplotig	exon	162694503	162694822	99	+	.	Parent=comp117844_c0_seq1.mrna2;Target=comp117844_c0_seq1 606 287 .
Chr1	stalkie_big_nohaplotig	CDS	162694642	162694692	.	+	0	Parent=comp117844_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	162682741	162694162	.	+	.	ID=FBgn0031440.1.mrna1;geneID=FBgn0031440.1.path1;Name=FBgn0031440.1;Dir=sensecoverage=100.0;identity=98.9;matches=1154;mismatches=13;indels=0;unknowns=0;locus=RLOC_00013274
Chr1	stalkie_big_nohaplotig	exon	162682741	162682765	100	+	.	Parent=FBgn0031440.1.mrna1;Target=FBgn0031440.1 1 25 +
Chr1	stalkie_big_nohaplotig	exon	162682825	162683663	98	+	.	Parent=FBgn0031440.1.mrna1;Target=FBgn0031440.1 26 864 +
Chr1	stalkie_big_nohaplotig	exon	162683714	162683926	98	+	.	Parent=FBgn0031440.1.mrna1;Target=FBgn0031440.1 865 1077 +
Chr1	stalkie_big_nohaplotig	exon	162694073	162694162	98	+	.	Parent=FBgn0031440.1.mrna1;Target=FBgn0031440.1 1078 1167 +
Chr1	stalkie_big_nohaplotig	CDS	162682741	162682765	.	+	0	Parent=FBgn0031440.1.mrna1;Target=FBgn0031440.1 1 25 +
Chr1	stalkie_big_nohaplotig	CDS	162682825	162683663	.	+	2	Parent=FBgn0031440.1.mrna1;Target=FBgn0031440.1 26 864 +
Chr1	stalkie_big_nohaplotig	CDS	162683714	162683926	.	+	0	Parent=FBgn0031440.1.mrna1;Target=FBgn0031440.1 865 1077 +
Chr1	stalkie_big_nohaplotig	CDS	162694073	162694162	.	+	0	Parent=FBgn0031440.1.mrna1;Target=FBgn0031440.1 1078 1167 +
Chr1	gffcl	locus	162656238	162657357	.	+	.	ID=RLOC_00013275;geneIDs=FBgn0013720.1.path1;transcripts=FBgn0013720.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162656238	162657357	.	+	.	ID=FBgn0013720.1.mrna1;geneID=FBgn0013720.1.path1;Name=FBgn0013720.1;Dir=sensecoverage=100.0;identity=99.1;matches=779;mismatches=7;indels=0;unknowns=0;locus=RLOC_00013275
Chr1	stalkie_big_nohaplotig	exon	162656238	162656334	98	+	.	Parent=FBgn0013720.1.mrna1;Target=FBgn0013720.1 1 97 +
Chr1	stalkie_big_nohaplotig	exon	162656424	162656632	99	+	.	Parent=FBgn0013720.1.mrna1;Target=FBgn0013720.1 98 306 +
Chr1	stalkie_big_nohaplotig	exon	162656687	162656882	100	+	.	Parent=FBgn0013720.1.mrna1;Target=FBgn0013720.1 307 502 +
Chr1	stalkie_big_nohaplotig	exon	162657074	162657357	98	+	.	Parent=FBgn0013720.1.mrna1;Target=FBgn0013720.1 503 786 +
Chr1	stalkie_big_nohaplotig	CDS	162656238	162656334	.	+	0	Parent=FBgn0013720.1.mrna1;Target=FBgn0013720.1 1 97 +
Chr1	stalkie_big_nohaplotig	CDS	162656424	162656632	.	+	2	Parent=FBgn0013720.1.mrna1;Target=FBgn0013720.1 98 306 +
Chr1	stalkie_big_nohaplotig	CDS	162656687	162656882	.	+	0	Parent=FBgn0013720.1.mrna1;Target=FBgn0013720.1 307 502 +
Chr1	stalkie_big_nohaplotig	CDS	162657074	162657357	.	+	2	Parent=FBgn0013720.1.mrna1;Target=FBgn0013720.1 503 786 +
Chr1	gffcl	locus	162659901	162664803	.	+	.	ID=RLOC_00013276;geneIDs=FBgn0025383.1.path1;transcripts=FBgn0025383.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162659901	162664803	.	+	.	ID=FBgn0025383.1.mrna1;geneID=FBgn0025383.1.path1;Name=FBgn0025383.1;Dir=sensecoverage=100.0;identity=99.7;matches=948;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013276
Chr1	stalkie_big_nohaplotig	exon	162659901	162660018	99	+	.	Parent=FBgn0025383.1.mrna1;Target=FBgn0025383.1 1 118 +
Chr1	stalkie_big_nohaplotig	exon	162663836	162664028	100	+	.	Parent=FBgn0025383.1.mrna1;Target=FBgn0025383.1 119 311 +
Chr1	stalkie_big_nohaplotig	exon	162664097	162664382	100	+	.	Parent=FBgn0025383.1.mrna1;Target=FBgn0025383.1 312 597 +
Chr1	stalkie_big_nohaplotig	exon	162664450	162664803	99	+	.	Parent=FBgn0025383.1.mrna1;Target=FBgn0025383.1 598 951 +
Chr1	stalkie_big_nohaplotig	CDS	162659901	162660018	.	+	0	Parent=FBgn0025383.1.mrna1;Target=FBgn0025383.1 1 118 +
Chr1	stalkie_big_nohaplotig	CDS	162663836	162664028	.	+	2	Parent=FBgn0025383.1.mrna1;Target=FBgn0025383.1 119 311 +
Chr1	stalkie_big_nohaplotig	CDS	162664097	162664382	.	+	1	Parent=FBgn0025383.1.mrna1;Target=FBgn0025383.1 312 597 +
Chr1	stalkie_big_nohaplotig	CDS	162664450	162664803	.	+	0	Parent=FBgn0025383.1.mrna1;Target=FBgn0025383.1 598 951 +
Chr1	gffcl	locus	162665017	162667163	.	-	.	ID=RLOC_00013277;geneIDs=FBgn0025382.1.path1;transcripts=FBgn0025382.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162665017	162667163	.	-	.	ID=FBgn0025382.1.mrna1;geneID=FBgn0025382.1.path1;Name=FBgn0025382.1;Dir=sensecoverage=100.0;identity=99.5;matches=728;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013277
Chr1	stalkie_big_nohaplotig	exon	162665017	162665553	99	-	.	Parent=FBgn0025382.1.mrna1;Target=FBgn0025382.1 196 732 +
Chr1	stalkie_big_nohaplotig	exon	162666969	162667163	100	-	.	Parent=FBgn0025382.1.mrna1;Target=FBgn0025382.1 1 195 +
Chr1	stalkie_big_nohaplotig	CDS	162665017	162665553	.	-	0	Parent=FBgn0025382.1.mrna1;Target=FBgn0025382.1 196 732 +
Chr1	stalkie_big_nohaplotig	CDS	162666969	162667163	.	-	0	Parent=FBgn0025382.1.mrna1;Target=FBgn0025382.1 1 195 +
Chr1	gffcl	locus	162697337	162698636	.	-	.	ID=RLOC_00013278;geneIDs=FBgn0003517.1.path1;transcripts=FBgn0003517.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162697337	162698636	.	-	.	ID=FBgn0003517.1.mrna1;geneID=FBgn0003517.1.path1;Name=FBgn0003517.1;Dir=sensecoverage=100.0;identity=99.1;matches=901;mismatches=8;indels=0;unknowns=0;locus=RLOC_00013278
Chr1	stalkie_big_nohaplotig	exon	162697337	162697927	99	-	.	Parent=FBgn0003517.1.mrna1;Target=FBgn0003517.1 319 909 +
Chr1	stalkie_big_nohaplotig	exon	162698103	162698346	98	-	.	Parent=FBgn0003517.1.mrna1;Target=FBgn0003517.1 75 318 +
Chr1	stalkie_big_nohaplotig	exon	162698563	162698636	97	-	.	Parent=FBgn0003517.1.mrna1;Target=FBgn0003517.1 1 74 +
Chr1	stalkie_big_nohaplotig	CDS	162697337	162697927	.	-	0	Parent=FBgn0003517.1.mrna1;Target=FBgn0003517.1 319 909 +
Chr1	stalkie_big_nohaplotig	CDS	162698103	162698346	.	-	1	Parent=FBgn0003517.1.mrna1;Target=FBgn0003517.1 75 318 +
Chr1	stalkie_big_nohaplotig	CDS	162698563	162698636	.	-	0	Parent=FBgn0003517.1.mrna1;Target=FBgn0003517.1 1 74 +
Chr1	gffcl	locus	162699397	162700132	.	-	.	ID=RLOC_00013279;geneIDs=comp152455_c0_seq1.path1;transcripts=comp152455_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162699397	162700132	.	-	.	ID=comp152455_c0_seq1.mrna1;geneID=comp152455_c0_seq1.path1;Name=comp152455_c0_seq1;Dir=antisensecoverage=94.5;identity=99.7;matches=656;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013279
Chr1	stalkie_big_nohaplotig	exon	162699397	162699932	99	-	.	Parent=comp152455_c0_seq1.mrna1;Target=comp152455_c0_seq1 39 574 -
Chr1	stalkie_big_nohaplotig	exon	162700011	162700132	99	-	.	Parent=comp152455_c0_seq1.mrna1;Target=comp152455_c0_seq1 575 696 -
Chr1	stalkie_big_nohaplotig	CDS	162699488	162699932	.	-	1	Parent=comp152455_c0_seq1.mrna1;Target=comp152455_c0_seq1 130 574 .
Chr1	stalkie_big_nohaplotig	CDS	162700011	162700024	.	-	0	Parent=comp152455_c0_seq1.mrna1;Target=comp152455_c0_seq1 575 588 .
Chr1	gffcl	locus	162701002	162701461	.	-	.	ID=RLOC_00013280;geneIDs=comp143554_c0_seq1.path1;transcripts=comp143554_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162701002	162701461	.	-	.	ID=comp143554_c0_seq1.mrna1;geneID=comp143554_c0_seq1.path1;Name=comp143554_c0_seq1;Dir=indeterminatecoverage=90.0;identity=98.0;matches=451;mismatches=6;indels=3;unknowns=0;Target=comp143554_c0_seq1 473 17 .;CDS_Target=comp143554_c0_seq1 410 147 .;locus=RLOC_00013280
Chr1	stalkie_big_nohaplotig	exon	162701002	162701461	98	-	.	Parent=comp143554_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162701068	162701331	.	-	0	Parent=comp143554_c0_seq1.mrna1
Chr1	gffcl	locus	162707956	162714569	.	-	.	ID=RLOC_00013281;geneIDs=FBgn0053513.1.path1;transcripts=FBgn0053513.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162707956	162714569	.	-	.	ID=FBgn0053513.1.mrna1;geneID=FBgn0053513.1.path1;Name=FBgn0053513.1;Dir=sensecoverage=100.0;identity=99.9;matches=2655;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013281
Chr1	stalkie_big_nohaplotig	exon	162707956	162707995	100	-	.	Parent=FBgn0053513.1.mrna1;Target=FBgn0053513.1 2619 2658 +
Chr1	stalkie_big_nohaplotig	exon	162710824	162710928	100	-	.	Parent=FBgn0053513.1.mrna1;Target=FBgn0053513.1 2514 2618 +
Chr1	stalkie_big_nohaplotig	exon	162710992	162711499	99	-	.	Parent=FBgn0053513.1.mrna1;Target=FBgn0053513.1 2006 2513 +
Chr1	stalkie_big_nohaplotig	exon	162712236	162712387	100	-	.	Parent=FBgn0053513.1.mrna1;Target=FBgn0053513.1 1854 2005 +
Chr1	stalkie_big_nohaplotig	exon	162712452	162712604	100	-	.	Parent=FBgn0053513.1.mrna1;Target=FBgn0053513.1 1701 1853 +
Chr1	stalkie_big_nohaplotig	exon	162712664	162712953	100	-	.	Parent=FBgn0053513.1.mrna1;Target=FBgn0053513.1 1411 1700 +
Chr1	stalkie_big_nohaplotig	exon	162713024	162713617	99	-	.	Parent=FBgn0053513.1.mrna1;Target=FBgn0053513.1 817 1410 +
Chr1	stalkie_big_nohaplotig	exon	162713677	162713827	100	-	.	Parent=FBgn0053513.1.mrna1;Target=FBgn0053513.1 666 816 +
Chr1	stalkie_big_nohaplotig	exon	162713905	162714569	99	-	.	Parent=FBgn0053513.1.mrna1;Target=FBgn0053513.1 1 665 +
Chr1	stalkie_big_nohaplotig	CDS	162707956	162707995	.	-	1	Parent=FBgn0053513.1.mrna1;Target=FBgn0053513.1 2619 2658 +
Chr1	stalkie_big_nohaplotig	CDS	162710824	162710928	.	-	1	Parent=FBgn0053513.1.mrna1;Target=FBgn0053513.1 2514 2618 +
Chr1	stalkie_big_nohaplotig	CDS	162710992	162711499	.	-	2	Parent=FBgn0053513.1.mrna1;Target=FBgn0053513.1 2006 2513 +
Chr1	stalkie_big_nohaplotig	CDS	162712236	162712387	.	-	1	Parent=FBgn0053513.1.mrna1;Target=FBgn0053513.1 1854 2005 +
Chr1	stalkie_big_nohaplotig	CDS	162712452	162712604	.	-	1	Parent=FBgn0053513.1.mrna1;Target=FBgn0053513.1 1701 1853 +
Chr1	stalkie_big_nohaplotig	CDS	162712664	162712953	.	-	0	Parent=FBgn0053513.1.mrna1;Target=FBgn0053513.1 1411 1700 +
Chr1	stalkie_big_nohaplotig	CDS	162713024	162713617	.	-	0	Parent=FBgn0053513.1.mrna1;Target=FBgn0053513.1 817 1410 +
Chr1	stalkie_big_nohaplotig	CDS	162713677	162713827	.	-	1	Parent=FBgn0053513.1.mrna1;Target=FBgn0053513.1 666 816 +
Chr1	stalkie_big_nohaplotig	CDS	162713905	162714569	.	-	0	Parent=FBgn0053513.1.mrna1;Target=FBgn0053513.1 1 665 +
Chr1	gffcl	locus	162733628	162733945	.	-	.	ID=RLOC_00013282;geneIDs=comp145802_c0_seq1.path1;transcripts=comp145802_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162733628	162733945	.	-	.	ID=comp145802_c0_seq1.mrna1;geneID=comp145802_c0_seq1.path1;Name=comp145802_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=310;mismatches=8;indels=0;unknowns=0;Target=comp145802_c0_seq1 318 1 .;CDS_Target=comp145802_c0_seq1 238 164 .;locus=RLOC_00013282
Chr1	stalkie_big_nohaplotig	exon	162733628	162733945	97	-	.	Parent=comp145802_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162733708	162733782	.	-	0	Parent=comp145802_c0_seq1.mrna1
Chr1	gffcl	locus	162767809	162770176	.	.	.	ID=RLOC_00013284;geneIDs=FBgn0025620.1.path1,comp144331_c0_seq1.path1;transcripts=FBgn0025620.1.mrna1,comp144331_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162767809	162770176	.	+	.	ID=FBgn0025620.1.mrna1;geneID=FBgn0025620.1.path1;Name=FBgn0025620.1;Dir=sensecoverage=100.0;identity=99.5;matches=1314;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013284
Chr1	stalkie_big_nohaplotig	exon	162767809	162768239	99	+	.	Parent=FBgn0025620.1.mrna1;Target=FBgn0025620.1 1 431 +
Chr1	stalkie_big_nohaplotig	exon	162768809	162768977	100	+	.	Parent=FBgn0025620.1.mrna1;Target=FBgn0025620.1 432 600 +
Chr1	stalkie_big_nohaplotig	exon	162769390	162769701	99	+	.	Parent=FBgn0025620.1.mrna1;Target=FBgn0025620.1 601 912 +
Chr1	stalkie_big_nohaplotig	exon	162769769	162770176	99	+	.	Parent=FBgn0025620.1.mrna1;Target=FBgn0025620.1 913 1320 +
Chr1	stalkie_big_nohaplotig	CDS	162767884	162768239	.	+	0	Parent=FBgn0025620.1.mrna1;Target=FBgn0025620.1 76 431 +
Chr1	stalkie_big_nohaplotig	CDS	162768809	162768977	.	+	1	Parent=FBgn0025620.1.mrna1;Target=FBgn0025620.1 432 600 +
Chr1	stalkie_big_nohaplotig	CDS	162769390	162769701	.	+	0	Parent=FBgn0025620.1.mrna1;Target=FBgn0025620.1 601 912 +
Chr1	stalkie_big_nohaplotig	CDS	162769769	162770176	.	+	0	Parent=FBgn0025620.1.mrna1;Target=FBgn0025620.1 913 1320 +
Chr1	stalkie_big_nohaplotig	mRNA	162768955	162769412	.	-	.	ID=comp144331_c0_seq1.mrna1;geneID=comp144331_c0_seq1.path1;Name=comp144331_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=449;mismatches=6;indels=3;unknowns=0;Target=comp144331_c0_seq1 455 1 .;CDS_Target=comp144331_c0_seq1 59 3 .;locus=RLOC_00013284
Chr1	stalkie_big_nohaplotig	exon	162768955	162769412	98	-	.	Parent=comp144331_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162769354	162769410	.	-	0	Parent=comp144331_c0_seq1.mrna1
Chr1	gffcl	locus	162777766	162778291	.	-	.	ID=RLOC_00013285;geneIDs=comp135148_c0_seq1.path1;transcripts=comp135148_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162777766	162778291	.	-	.	ID=comp135148_c0_seq1.mrna1;geneID=comp135148_c0_seq1.path1;Name=comp135148_c0_seq1;Dir=indeterminatecoverage=96.0;identity=97.9;matches=515;mismatches=11;indels=0;unknowns=0;Target=comp135148_c0_seq1 548 23 .;CDS_Target=comp135148_c0_seq1 196 74 .;locus=RLOC_00013285
Chr1	stalkie_big_nohaplotig	exon	162777766	162778291	97	-	.	Parent=comp135148_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162778118	162778240	.	-	0	Parent=comp135148_c0_seq1.mrna1
Chr1	gffcl	locus	162784567	162786107	.	+	.	ID=RLOC_00013286;geneIDs=comp146215_c0_seq1.path1;transcripts=comp146215_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162784567	162786107	.	+	.	ID=comp146215_c0_seq1.mrna1;geneID=comp146215_c0_seq1.path1;Name=comp146215_c0_seq1;Dir=sensecoverage=99.6;identity=100.0;matches=703;mismatches=0;indels=0;unknowns=0;Target=comp146215_c0_seq1 5 106 +;locus=RLOC_00013286
Chr1	stalkie_big_nohaplotig	exon	162784567	162785246	100	+	.	Parent=comp146215_c0_seq1.mrna1;Target=comp146215_c0_seq1 4 683 +
Chr1	stalkie_big_nohaplotig	exon	162786085	162786107	100	+	.	Parent=comp146215_c0_seq1.mrna1;Target=comp146215_c0_seq1 684 706 +
Chr1	stalkie_big_nohaplotig	CDS	162784568	162784669	.	+	0	Parent=comp146215_c0_seq1.mrna1
Chr1	gffcl	locus	162793627	162794228	.	-	.	ID=RLOC_00013288;geneIDs=comp116358_c0_seq1.path1;transcripts=comp116358_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162793627	162794228	.	-	.	ID=comp116358_c0_seq1.mrna1;geneID=comp116358_c0_seq1.path1;Name=comp116358_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.0;matches=596;mismatches=4;indels=2;unknowns=0;Target=comp116358_c0_seq1 600 1 .;CDS_Target=comp116358_c0_seq1 387 271 .;locus=RLOC_00013288
Chr1	stalkie_big_nohaplotig	exon	162793627	162794228	99	-	.	Parent=comp116358_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162793840	162793956	.	-	0	Parent=comp116358_c0_seq1.mrna1
Chr1	gffcl	locus	162799844	162801372	.	+	.	ID=RLOC_00013289;geneIDs=comp151487_c0_seq1.path1,comp152038_c0_seq1.path1;transcripts=comp152038_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162799844	162800663	.	+	.	ID=comp152038_c0_seq1.mrna1;geneID=comp152038_c0_seq1.path1;Name=comp152038_c0_seq1;Dir=indeterminatecoverage=97.7;identity=98.9;matches=811;mismatches=9;indels=0;unknowns=0;Target=comp152038_c0_seq1 820 1 .;CDS_Target=comp152038_c0_seq1 820 752 .;locus=RLOC_00013289
Chr1	stalkie_big_nohaplotig	exon	162799844	162800663	98	+	.	Parent=comp152038_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162800595	162800663	.	+	0	Parent=comp152038_c0_seq1.mrna1
Chr1	gffcl	locus	162863707	162864804	.	-	.	ID=RLOC_00013290;geneIDs=FBgn0030653.2.path1;transcripts=FBgn0030653.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162863707	162864804	.	-	.	ID=FBgn0030653.2.mrna1;geneID=FBgn0030653.2.path1;Name=FBgn0030653.2;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1091;mismatches=7;indels=0;unknowns=0;Target=FBgn0030653.2 1098 1 .;locus=RLOC_00013290
Chr1	stalkie_big_nohaplotig	exon	162863707	162864804	99	-	.	Parent=FBgn0030653.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162863707	162864804	.	-	0	Parent=FBgn0030653.2.mrna1
Chr1	gffcl	locus	162866425	162869655	.	-	.	ID=RLOC_00013291;geneIDs=FBgn0030932.1.path1;transcripts=FBgn0030932.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162866425	162869655	.	-	.	ID=FBgn0030932.1.mrna1;geneID=FBgn0030932.1.path1;Name=FBgn0030932.1;Dir=sensecoverage=98.7;identity=99.4;matches=1728;mismatches=10;indels=0;unknowns=0;locus=RLOC_00013291
Chr1	stalkie_big_nohaplotig	exon	162866425	162866712	98	-	.	Parent=FBgn0030932.1.mrna1;Target=FBgn0030932.1 1474 1761 +
Chr1	stalkie_big_nohaplotig	exon	162866776	162867016	99	-	.	Parent=FBgn0030932.1.mrna1;Target=FBgn0030932.1 1233 1473 +
Chr1	stalkie_big_nohaplotig	exon	162867072	162867509	99	-	.	Parent=FBgn0030932.1.mrna1;Target=FBgn0030932.1 795 1232 +
Chr1	stalkie_big_nohaplotig	exon	162868287	162868680	100	-	.	Parent=FBgn0030932.1.mrna1;Target=FBgn0030932.1 401 794 +
Chr1	stalkie_big_nohaplotig	exon	162869212	162869426	100	-	.	Parent=FBgn0030932.1.mrna1;Target=FBgn0030932.1 186 400 +
Chr1	stalkie_big_nohaplotig	exon	162869494	162869655	99	-	.	Parent=FBgn0030932.1.mrna1;Target=FBgn0030932.1 24 185 +
Chr1	stalkie_big_nohaplotig	CDS	162866425	162866712	.	-	0	Parent=FBgn0030932.1.mrna1;Target=FBgn0030932.1 1474 1761 +
Chr1	stalkie_big_nohaplotig	CDS	162866776	162867016	.	-	1	Parent=FBgn0030932.1.mrna1;Target=FBgn0030932.1 1233 1473 +
Chr1	stalkie_big_nohaplotig	CDS	162867072	162867509	.	-	1	Parent=FBgn0030932.1.mrna1;Target=FBgn0030932.1 795 1232 +
Chr1	stalkie_big_nohaplotig	CDS	162868287	162868680	.	-	2	Parent=FBgn0030932.1.mrna1;Target=FBgn0030932.1 401 794 +
Chr1	stalkie_big_nohaplotig	CDS	162869212	162869426	.	-	1	Parent=FBgn0030932.1.mrna1;Target=FBgn0030932.1 186 400 +
Chr1	stalkie_big_nohaplotig	CDS	162869494	162869654	.	-	0	Parent=FBgn0030932.1.mrna1;Target=FBgn0030932.1 25 185 +
Chr1	gffcl	locus	162872876	162873397	.	-	.	ID=RLOC_00013292;geneIDs=comp88994_c0_seq1.path1;transcripts=comp88994_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162872876	162873397	.	-	.	ID=comp88994_c0_seq1.mrna1;geneID=comp88994_c0_seq1.path1;Name=comp88994_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.3;matches=487;mismatches=9;indels=26;unknowns=0;Target=comp88994_c0_seq1 496 1 .;CDS_Target=comp88994_c0_seq1 338 123 .;locus=RLOC_00013292
Chr1	stalkie_big_nohaplotig	exon	162872876	162873397	93	-	.	Parent=comp88994_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162873037	162873252	.	-	0	Parent=comp88994_c0_seq1.mrna1
Chr1	gffcl	locus	162873459	162873683	.	-	.	ID=RLOC_00013293;geneIDs=comp110242_c0_seq1.path1;transcripts=comp110242_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162873459	162873683	.	-	.	ID=comp110242_c0_seq1.mrna1;geneID=comp110242_c0_seq1.path1;Name=comp110242_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.0;matches=216;mismatches=9;indels=0;unknowns=0;Target=comp110242_c0_seq1 225 1 .;CDS_Target=comp110242_c0_seq1 225 76 .;locus=RLOC_00013293
Chr1	stalkie_big_nohaplotig	exon	162873459	162873683	96	-	.	Parent=comp110242_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162873459	162873608	.	-	0	Parent=comp110242_c0_seq1.mrna1
Chr1	gffcl	locus	162886978	162900839	.	+	.	ID=RLOC_00013294;geneIDs=FBgn0262684.1.path1;transcripts=FBgn0262684.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162886978	162900839	.	+	.	ID=FBgn0262684.1.mrna1;geneID=FBgn0262684.1.path1;Name=FBgn0262684.1;Dir=sensecoverage=100.0;identity=99.8;matches=3035;mismatches=7;indels=0;unknowns=0;locus=RLOC_00013294
Chr1	stalkie_big_nohaplotig	exon	162886978	162887708	99	+	.	Parent=FBgn0262684.1.mrna1;Target=FBgn0262684.1 1 731 +
Chr1	stalkie_big_nohaplotig	exon	162887898	162888195	100	+	.	Parent=FBgn0262684.1.mrna1;Target=FBgn0262684.1 732 1029 +
Chr1	stalkie_big_nohaplotig	exon	162888265	162889135	99	+	.	Parent=FBgn0262684.1.mrna1;Target=FBgn0262684.1 1030 1900 +
Chr1	stalkie_big_nohaplotig	exon	162889206	162889512	99	+	.	Parent=FBgn0262684.1.mrna1;Target=FBgn0262684.1 1901 2207 +
Chr1	stalkie_big_nohaplotig	exon	162889584	162889756	100	+	.	Parent=FBgn0262684.1.mrna1;Target=FBgn0262684.1 2208 2380 +
Chr1	stalkie_big_nohaplotig	exon	162889833	162889982	100	+	.	Parent=FBgn0262684.1.mrna1;Target=FBgn0262684.1 2381 2530 +
Chr1	stalkie_big_nohaplotig	exon	162900328	162900839	99	+	.	Parent=FBgn0262684.1.mrna1;Target=FBgn0262684.1 2531 3042 +
Chr1	stalkie_big_nohaplotig	CDS	162886978	162887708	.	+	0	Parent=FBgn0262684.1.mrna1;Target=FBgn0262684.1 1 731 +
Chr1	stalkie_big_nohaplotig	CDS	162887898	162888195	.	+	1	Parent=FBgn0262684.1.mrna1;Target=FBgn0262684.1 732 1029 +
Chr1	stalkie_big_nohaplotig	CDS	162888265	162889135	.	+	0	Parent=FBgn0262684.1.mrna1;Target=FBgn0262684.1 1030 1900 +
Chr1	stalkie_big_nohaplotig	CDS	162889206	162889512	.	+	2	Parent=FBgn0262684.1.mrna1;Target=FBgn0262684.1 1901 2207 +
Chr1	stalkie_big_nohaplotig	CDS	162889584	162889756	.	+	1	Parent=FBgn0262684.1.mrna1;Target=FBgn0262684.1 2208 2380 +
Chr1	stalkie_big_nohaplotig	CDS	162889833	162889982	.	+	2	Parent=FBgn0262684.1.mrna1;Target=FBgn0262684.1 2381 2530 +
Chr1	stalkie_big_nohaplotig	CDS	162900328	162900839	.	+	2	Parent=FBgn0262684.1.mrna1;Target=FBgn0262684.1 2531 3042 +
Chr1	gffcl	locus	162897652	162898724	.	-	.	ID=RLOC_00013295;geneIDs=comp160069_c0_seq1.path1;transcripts=comp160069_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162897652	162898724	.	-	.	ID=comp160069_c0_seq1.mrna1;geneID=comp160069_c0_seq1.path1;Name=comp160069_c0_seq1;Dir=indeterminatecoverage=99.3;identity=97.1;matches=1045;mismatches=11;indels=20;unknowns=0;Target=comp160069_c0_seq1 1059 1 .;CDS_Target=comp160069_c0_seq1 365 234 .;locus=RLOC_00013295
Chr1	stalkie_big_nohaplotig	exon	162897652	162898724	97	-	.	Parent=comp160069_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162898360	162898491	.	-	0	Parent=comp160069_c0_seq1.mrna1
Chr1	gffcl	locus	162903118	162903638	.	-	.	ID=RLOC_00013296;geneIDs=comp144955_c0_seq1.path1;transcripts=comp144955_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162903118	162903638	.	-	.	ID=comp144955_c0_seq1.mrna1;geneID=comp144955_c0_seq1.path1;Name=comp144955_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.4;matches=519;mismatches=2;indels=1;unknowns=0;Target=comp144955_c0_seq1 526 5 .;CDS_Target=comp144955_c0_seq1 69 7 .;locus=RLOC_00013296
Chr1	stalkie_big_nohaplotig	exon	162903118	162903638	99	-	.	Parent=comp144955_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162903574	162903636	.	-	0	Parent=comp144955_c0_seq1.mrna1
Chr1	gffcl	locus	162904214	162904636	.	+	.	ID=RLOC_00013297;geneIDs=comp156548_c0_seq1.path1;transcripts=comp156548_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162904214	162904636	.	+	.	ID=comp156548_c0_seq1.mrna1;geneID=comp156548_c0_seq1.path1;Name=comp156548_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=412;mismatches=5;indels=6;unknowns=0;Target=comp156548_c0_seq1 417 1 .;CDS_Target=comp156548_c0_seq1 212 180 .;locus=RLOC_00013297
Chr1	stalkie_big_nohaplotig	exon	162904214	162904636	97	+	.	Parent=comp156548_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162904393	162904427	.	+	0	Parent=comp156548_c0_seq1.mrna1
Chr1	gffcl	locus	162906225	162906827	.	+	.	ID=RLOC_00013298;geneIDs=comp102439_c0_seq1.path1;transcripts=comp102439_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162906225	162906827	.	+	.	ID=comp102439_c0_seq1.mrna1;geneID=comp102439_c0_seq1.path1;Name=comp102439_c0_seq1;Dir=indeterminatecoverage=94.5;identity=93.1;matches=591;mismatches=12;indels=32;unknowns=0;Target=comp102439_c0_seq1 642 8 .;CDS_Target=comp102439_c0_seq1 63 10 .;locus=RLOC_00013298
Chr1	stalkie_big_nohaplotig	exon	162906225	162906827	93	+	.	Parent=comp102439_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162906227	162906266	.	+	0	Parent=comp102439_c0_seq1.mrna1
Chr1	gffcl	locus	162908399	162911817	.	+	.	ID=RLOC_00013299;geneIDs=FBgn0025837.1.path1;transcripts=FBgn0025837.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162908399	162911817	.	+	.	ID=FBgn0025837.1.mrna1;geneID=FBgn0025837.1.path1;Name=FBgn0025837.1;Dir=sensecoverage=100.0;identity=99.0;matches=1723;mismatches=17;indels=0;unknowns=0;locus=RLOC_00013299
Chr1	stalkie_big_nohaplotig	exon	162908399	162908421	91	+	.	Parent=FBgn0025837.1.mrna1;Target=FBgn0025837.1 1 23 +
Chr1	stalkie_big_nohaplotig	exon	162909788	162909961	98	+	.	Parent=FBgn0025837.1.mrna1;Target=FBgn0025837.1 24 197 +
Chr1	stalkie_big_nohaplotig	exon	162910031	162910242	99	+	.	Parent=FBgn0025837.1.mrna1;Target=FBgn0025837.1 198 409 +
Chr1	stalkie_big_nohaplotig	exon	162910306	162910702	99	+	.	Parent=FBgn0025837.1.mrna1;Target=FBgn0025837.1 410 806 +
Chr1	stalkie_big_nohaplotig	exon	162910768	162911193	99	+	.	Parent=FBgn0025837.1.mrna1;Target=FBgn0025837.1 807 1232 +
Chr1	stalkie_big_nohaplotig	exon	162911255	162911495	97	+	.	Parent=FBgn0025837.1.mrna1;Target=FBgn0025837.1 1233 1473 +
Chr1	stalkie_big_nohaplotig	exon	162911551	162911817	98	+	.	Parent=FBgn0025837.1.mrna1;Target=FBgn0025837.1 1474 1740 +
Chr1	stalkie_big_nohaplotig	CDS	162908399	162908421	.	+	0	Parent=FBgn0025837.1.mrna1;Target=FBgn0025837.1 1 23 +
Chr1	stalkie_big_nohaplotig	CDS	162909788	162909961	.	+	1	Parent=FBgn0025837.1.mrna1;Target=FBgn0025837.1 24 197 +
Chr1	stalkie_big_nohaplotig	CDS	162910031	162910242	.	+	1	Parent=FBgn0025837.1.mrna1;Target=FBgn0025837.1 198 409 +
Chr1	stalkie_big_nohaplotig	CDS	162910306	162910702	.	+	2	Parent=FBgn0025837.1.mrna1;Target=FBgn0025837.1 410 806 +
Chr1	stalkie_big_nohaplotig	CDS	162910768	162911193	.	+	1	Parent=FBgn0025837.1.mrna1;Target=FBgn0025837.1 807 1232 +
Chr1	stalkie_big_nohaplotig	CDS	162911255	162911495	.	+	1	Parent=FBgn0025837.1.mrna1;Target=FBgn0025837.1 1233 1473 +
Chr1	stalkie_big_nohaplotig	CDS	162911551	162911817	.	+	0	Parent=FBgn0025837.1.mrna1;Target=FBgn0025837.1 1474 1740 +
Chr1	gffcl	locus	162915337	162917306	.	+	.	ID=RLOC_00013300;geneIDs=comp136943_c1_seq1.path1;transcripts=comp136943_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162915337	162917306	.	+	.	ID=comp136943_c1_seq1.mrna1;geneID=comp136943_c1_seq1.path1;Name=comp136943_c1_seq1;Dir=indeterminatecoverage=99.4;identity=97.1;matches=1927;mismatches=43;indels=14;unknowns=0;Target=comp136943_c1_seq1 1995 12 .;CDS_Target=comp136943_c1_seq1 657 478 .;locus=RLOC_00013300
Chr1	stalkie_big_nohaplotig	exon	162915337	162917306	97	+	.	Parent=comp136943_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162915800	162915979	.	+	0	Parent=comp136943_c1_seq1.mrna1
Chr1	gffcl	locus	162918030	162918964	.	-	.	ID=RLOC_00013301;geneIDs=comp74624_c0_seq1.path1;transcripts=comp74624_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162918030	162918964	.	-	.	ID=comp74624_c0_seq1.mrna1;geneID=comp74624_c0_seq1.path1;Name=comp74624_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.3;matches=883;mismatches=41;indels=22;unknowns=0;Target=comp74624_c0_seq1 935 1 .;CDS_Target=comp74624_c0_seq1 823 659 .;locus=RLOC_00013301
Chr1	stalkie_big_nohaplotig	exon	162918030	162918964	93	-	.	Parent=comp74624_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162918142	162918297	.	-	0	Parent=comp74624_c0_seq1.mrna1
Chr1	gffcl	locus	162920161	162920681	.	+	.	ID=RLOC_00013302;geneIDs=comp88994_c0_seq1.path2;transcripts=comp88994_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	162920161	162920681	.	+	.	ID=comp88994_c0_seq1.mrna2;geneID=comp88994_c0_seq1.path2;Name=comp88994_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.3;matches=486;mismatches=10;indels=25;unknowns=0;Target=comp88994_c0_seq1 496 1 .;CDS_Target=comp88994_c0_seq1 338 33 .;locus=RLOC_00013302
Chr1	stalkie_big_nohaplotig	exon	162920161	162920681	93	+	.	Parent=comp88994_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	162920193	162920520	.	+	0	Parent=comp88994_c0_seq1.mrna2
Chr1	gffcl	locus	162921735	162924832	.	+	.	ID=RLOC_00013303;geneIDs=comp151928_c0_seq1.path1;transcripts=comp151928_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162921735	162924832	.	+	.	ID=comp151928_c0_seq1.mrna1;geneID=comp151928_c0_seq1.path1;Name=comp151928_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.3;matches=2072;mismatches=65;indels=84;unknowns=0;Target=comp151928_c0_seq1 111 1 .;locus=RLOC_00013303
Chr1	stalkie_big_nohaplotig	exon	162921735	162923333	95	+	.	Parent=comp151928_c0_seq1.mrna1;Target=comp151928_c0_seq1 1563 1 .
Chr1	stalkie_big_nohaplotig	exon	162924259	162924832	88	+	.	Parent=comp151928_c0_seq1.mrna1;Target=comp151928_c0_seq1 2185 1564 .
Chr1	stalkie_big_nohaplotig	CDS	162921735	162921845	.	+	0	Parent=comp151928_c0_seq1.mrna1
Chr1	gffcl	locus	162934129	162934890	.	+	.	ID=RLOC_00013304;geneIDs=comp153275_c1_seq1.path1;transcripts=comp153275_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162934129	162934890	.	+	.	ID=comp153275_c1_seq1.mrna1;geneID=comp153275_c1_seq1.path1;Name=comp153275_c1_seq1;Dir=indeterminatecoverage=98.3;identity=99.2;matches=757;mismatches=4;indels=2;unknowns=0;Target=comp153275_c1_seq1 775 14 .;CDS_Target=comp153275_c1_seq1 775 536 .;locus=RLOC_00013304
Chr1	stalkie_big_nohaplotig	exon	162934129	162934890	99	+	.	Parent=comp153275_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	162934651	162934890	.	+	0	Parent=comp153275_c1_seq1.mrna1
Chr1	gffcl	locus	162937668	162942038	.	+	.	ID=RLOC_00013305;geneIDs=comp138151_c1_seq1.path1;transcripts=comp138151_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162937668	162942038	.	+	.	ID=comp138151_c1_seq1.mrna1;geneID=comp138151_c1_seq1.path1;Name=comp138151_c1_seq1;Dir=antisensecoverage=91.5;identity=99.6;matches=668;mismatches=2;indels=1;unknowns=0;Target=comp138151_c1_seq1 485 619 .;locus=RLOC_00013305
Chr1	stalkie_big_nohaplotig	exon	162937668	162937951	99	+	.	Parent=comp138151_c1_seq1.mrna1;Target=comp138151_c1_seq1 387 670 -
Chr1	stalkie_big_nohaplotig	exon	162941652	162942038	99	+	.	Parent=comp138151_c1_seq1.mrna1;Target=comp138151_c1_seq1 1 386 -
Chr1	stalkie_big_nohaplotig	CDS	162937719	162937853	.	+	0	Parent=comp138151_c1_seq1.mrna1
Chr1	gffcl	locus	162980669	162983085	.	-	.	ID=RLOC_00013306;geneIDs=comp161587_c1_seq1.path1;transcripts=comp161587_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	162980669	162983085	.	-	.	ID=comp161587_c1_seq1.mrna1;geneID=comp161587_c1_seq1.path1;Name=comp161587_c1_seq1;Dir=sensecoverage=98.4;identity=94.8;matches=1559;mismatches=41;indels=45;unknowns=0;locus=RLOC_00013306
Chr1	stalkie_big_nohaplotig	exon	162980669	162981483	91	-	.	Parent=comp161587_c1_seq1.mrna1;Target=comp161587_c1_seq1 815 1661 +
Chr1	stalkie_big_nohaplotig	exon	162981637	162981704	94	-	.	Parent=comp161587_c1_seq1.mrna1;Target=comp161587_c1_seq1 747 814 +
Chr1	stalkie_big_nohaplotig	exon	162981789	162981915	96	-	.	Parent=comp161587_c1_seq1.mrna1;Target=comp161587_c1_seq1 621 746 +
Chr1	stalkie_big_nohaplotig	exon	162982026	162982365	99	-	.	Parent=comp161587_c1_seq1.mrna1;Target=comp161587_c1_seq1 281 620 +
Chr1	stalkie_big_nohaplotig	exon	162982829	162983085	98	-	.	Parent=comp161587_c1_seq1.mrna1;Target=comp161587_c1_seq1 24 280 +
Chr1	stalkie_big_nohaplotig	CDS	162982174	162982365	.	-	0	Parent=comp161587_c1_seq1.mrna1;Target=comp161587_c1_seq1 281 472 +
Chr1	stalkie_big_nohaplotig	CDS	162982829	162982969	.	-	0	Parent=comp161587_c1_seq1.mrna1;Target=comp161587_c1_seq1 140 280 +
Chr1	gffcl	locus	163042308	163043135	.	-	.	ID=RLOC_00013307;geneIDs=comp154024_c0_seq1.path1;transcripts=comp154024_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163042308	163043135	.	-	.	ID=comp154024_c0_seq1.mrna1;geneID=comp154024_c0_seq1.path1;Name=comp154024_c0_seq1;Dir=antisensecoverage=97.4;identity=94.0;matches=710;mismatches=22;indels=23;unknowns=0;Target=comp154024_c0_seq1 617 661 .;locus=RLOC_00013307
Chr1	stalkie_big_nohaplotig	exon	163042308	163042809	93	-	.	Parent=comp154024_c0_seq1.mrna1;Target=comp154024_c0_seq1 3 495 -
Chr1	stalkie_big_nohaplotig	exon	163042895	163043135	95	-	.	Parent=comp154024_c0_seq1.mrna1;Target=comp154024_c0_seq1 496 746 -
Chr1	stalkie_big_nohaplotig	CDS	163043016	163043050	.	-	0	Parent=comp154024_c0_seq1.mrna1
Chr1	gffcl	locus	163065365	163066744	.	+	.	ID=RLOC_00013308;geneIDs=ORF864.path2;transcripts=ORF864.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	163065365	163066744	.	+	.	ID=ORF864.mrna2;geneID=ORF864.path2;Name=ORF864;Dir=indeterminatecoverage=100.0;identity=97.5;matches=1351;mismatches=24;indels=10;unknowns=0;Target=ORF864 1380 1 .;locus=RLOC_00013308
Chr1	stalkie_big_nohaplotig	exon	163065365	163066744	97	+	.	Parent=ORF864.mrna2
Chr1	stalkie_big_nohaplotig	CDS	163065365	163066744	.	+	0	Parent=ORF864.mrna2
Chr1	gffcl	locus	163116779	163117410	.	-	.	ID=RLOC_00013309;geneIDs=comp154304_c0_seq1.path1;transcripts=comp154304_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163116779	163117410	.	-	.	ID=comp154304_c0_seq1.mrna1;geneID=comp154304_c0_seq1.path1;Name=comp154304_c0_seq1;Dir=sensecoverage=99.0;identity=99.3;matches=569;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013309
Chr1	stalkie_big_nohaplotig	exon	163116779	163117070	99	-	.	Parent=comp154304_c0_seq1.mrna1;Target=comp154304_c0_seq1 282 573 +
Chr1	stalkie_big_nohaplotig	exon	163117130	163117410	99	-	.	Parent=comp154304_c0_seq1.mrna1;Target=comp154304_c0_seq1 1 281 +
Chr1	stalkie_big_nohaplotig	CDS	163116972	163117070	.	-	0	Parent=comp154304_c0_seq1.mrna1;Target=comp154304_c0_seq1 282 380 +
Chr1	stalkie_big_nohaplotig	CDS	163117130	163117408	.	-	0	Parent=comp154304_c0_seq1.mrna1;Target=comp154304_c0_seq1 3 281 +
Chr1	gffcl	locus	163124920	163125511	.	-	.	ID=RLOC_00013310;geneIDs=comp152513_c0_seq1.path1;transcripts=comp152513_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163124920	163125511	.	-	.	ID=comp152513_c0_seq1.mrna1;geneID=comp152513_c0_seq1.path1;Name=comp152513_c0_seq1;Dir=indeterminatecoverage=99.8;identity=94.2;matches=564;mismatches=28;indels=7;unknowns=0;Target=comp152513_c0_seq1 600 2 .;CDS_Target=comp152513_c0_seq1 116 3 .;locus=RLOC_00013310
Chr1	stalkie_big_nohaplotig	exon	163124920	163125511	94	-	.	Parent=comp152513_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	163125397	163125510	.	-	0	Parent=comp152513_c0_seq1.mrna1
Chr1	gffcl	locus	163178657	163181729	.	-	.	ID=RLOC_00013311;geneIDs=comp161440_c1_seq1.path1;transcripts=comp161440_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163178657	163181729	.	-	.	ID=comp161440_c1_seq1.mrna1;geneID=comp161440_c1_seq1.path1;Name=comp161440_c1_seq1;Dir=antisensecoverage=100.0;identity=86.1;matches=2249;mismatches=254;indels=110;unknowns=0;locus=RLOC_00013311
Chr1	stalkie_big_nohaplotig	exon	163178657	163179947	83	-	.	Parent=comp161440_c1_seq1.mrna1;Target=comp161440_c1_seq1 2 1297 -
Chr1	stalkie_big_nohaplotig	exon	163179978	163180247	80	-	.	Parent=comp161440_c1_seq1.mrna1;Target=comp161440_c1_seq1 1298 1604 -
Chr1	stalkie_big_nohaplotig	exon	163180300	163180739	85	-	.	Parent=comp161440_c1_seq1.mrna1;Target=comp161440_c1_seq1 1605 1997 -
Chr1	stalkie_big_nohaplotig	exon	163180803	163180959	87	-	.	Parent=comp161440_c1_seq1.mrna1;Target=comp161440_c1_seq1 1998 2162 -
Chr1	stalkie_big_nohaplotig	exon	163181030	163181246	99	-	.	Parent=comp161440_c1_seq1.mrna1;Target=comp161440_c1_seq1 2163 2379 -
Chr1	stalkie_big_nohaplotig	exon	163181549	163181729	98	-	.	Parent=comp161440_c1_seq1.mrna1;Target=comp161440_c1_seq1 2380 2561 -
Chr1	stalkie_big_nohaplotig	CDS	163181055	163181246	.	-	0	Parent=comp161440_c1_seq1.mrna1;Target=comp161440_c1_seq1 2188 2379 .
Chr1	stalkie_big_nohaplotig	CDS	163181549	163181659	.	-	0	Parent=comp161440_c1_seq1.mrna1;Target=comp161440_c1_seq1 2380 2490 .
Chr1	gffcl	locus	163202829	163214634	.	+	.	ID=RLOC_00013312;geneIDs=FBgn0036333.1.path1;transcripts=FBgn0036333.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163202829	163214634	.	+	.	ID=FBgn0036333.1.mrna1;geneID=FBgn0036333.1.path1;Name=FBgn0036333.1;Dir=sensecoverage=100.0;identity=99.2;matches=2870;mismatches=16;indels=6;unknowns=0;locus=RLOC_00013312
Chr1	stalkie_big_nohaplotig	exon	163202829	163204015	98	+	.	Parent=FBgn0036333.1.mrna1;Target=FBgn0036333.1 1 1181 +
Chr1	stalkie_big_nohaplotig	exon	163212483	163213748	99	+	.	Parent=FBgn0036333.1.mrna1;Target=FBgn0036333.1 1182 2447 +
Chr1	stalkie_big_nohaplotig	exon	163213810	163214017	100	+	.	Parent=FBgn0036333.1.mrna1;Target=FBgn0036333.1 2448 2655 +
Chr1	stalkie_big_nohaplotig	exon	163214343	163214492	100	+	.	Parent=FBgn0036333.1.mrna1;Target=FBgn0036333.1 2656 2805 +
Chr1	stalkie_big_nohaplotig	exon	163214554	163214634	100	+	.	Parent=FBgn0036333.1.mrna1;Target=FBgn0036333.1 2806 2886 +
Chr1	stalkie_big_nohaplotig	CDS	163202829	163204015	.	+	0	Parent=FBgn0036333.1.mrna1;Target=FBgn0036333.1 1 1181 +
Chr1	stalkie_big_nohaplotig	CDS	163212483	163213748	.	+	1	Parent=FBgn0036333.1.mrna1;Target=FBgn0036333.1 1182 2447 +
Chr1	stalkie_big_nohaplotig	CDS	163213810	163214017	.	+	1	Parent=FBgn0036333.1.mrna1;Target=FBgn0036333.1 2448 2655 +
Chr1	stalkie_big_nohaplotig	CDS	163214343	163214492	.	+	0	Parent=FBgn0036333.1.mrna1;Target=FBgn0036333.1 2656 2805 +
Chr1	stalkie_big_nohaplotig	CDS	163214554	163214634	.	+	0	Parent=FBgn0036333.1.mrna1;Target=FBgn0036333.1 2806 2886 +
Chr1	gffcl	locus	163211142	163212350	.	+	.	ID=RLOC_00013313;geneIDs=comp146204_c2_seq1.path1;transcripts=comp146204_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163211142	163212350	.	+	.	ID=comp146204_c2_seq1.mrna1;geneID=comp146204_c2_seq1.path1;Name=comp146204_c2_seq1;Dir=indeterminatecoverage=97.9;identity=95.5;matches=1193;mismatches=13;indels=43;unknowns=0;Target=comp146204_c2_seq1 1250 5 .;CDS_Target=comp146204_c2_seq1 738 586 .;locus=RLOC_00013313
Chr1	stalkie_big_nohaplotig	exon	163211142	163212350	95	+	.	Parent=comp146204_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	163211705	163211857	.	+	0	Parent=comp146204_c2_seq1.mrna1
Chr1	gffcl	locus	163216338	163217489	.	+	.	ID=RLOC_00013314;geneIDs=ORF1291.path1;transcripts=ORF1291.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163216338	163217489	.	+	.	ID=ORF1291.mrna1;geneID=ORF1291.path1;Name=ORF1291;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1147;mismatches=5;indels=0;unknowns=0;Target=ORF1291 1152 1 .;locus=RLOC_00013314
Chr1	stalkie_big_nohaplotig	exon	163216338	163217489	99	+	.	Parent=ORF1291.mrna1
Chr1	stalkie_big_nohaplotig	CDS	163216338	163217489	.	+	0	Parent=ORF1291.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163226126	163226507	.	-	.	ID=comp68002_c0_seq1.mrna1;geneID=comp68002_c0_seq1.path1;Name=comp68002_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=233;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013315
Chr1	stalkie_big_nohaplotig	exon	163226126	163226335	99	-	.	Parent=comp68002_c0_seq1.mrna1;Target=comp68002_c0_seq1 1 210 -
Chr1	stalkie_big_nohaplotig	exon	163226484	163226507	100	-	.	Parent=comp68002_c0_seq1.mrna1;Target=comp68002_c0_seq1 211 234 -
Chr1	stalkie_big_nohaplotig	CDS	163226300	163226335	.	-	0	Parent=comp68002_c0_seq1.mrna1;Target=comp68002_c0_seq1 175 210 .
Chr1	stalkie_big_nohaplotig	CDS	163226484	163226507	.	-	0	Parent=comp68002_c0_seq1.mrna1;Target=comp68002_c0_seq1 211 234 .
Chr1	gffcl	locus	163221315	163223949	.	.	.	ID=RLOC_00013316;geneIDs=Dv_FBgn0203763.1.path1,comp145385_c0_seq1.path1;transcripts=Dv_FBgn0203763.1.mrna1,comp145385_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163221315	163223949	.	+	.	ID=Dv_FBgn0203763.1.mrna1;geneID=Dv_FBgn0203763.1.path1;Name=Dv_FBgn0203763.1;Dir=sensecoverage=100.0;identity=99.0;matches=1880;mismatches=19;indels=0;unknowns=0;locus=RLOC_00013316
Chr1	stalkie_big_nohaplotig	exon	163221315	163221426	99	+	.	Parent=Dv_FBgn0203763.1.mrna1;Target=Dv_FBgn0203763.1 1 112 +
Chr1	stalkie_big_nohaplotig	exon	163222163	163223949	98	+	.	Parent=Dv_FBgn0203763.1.mrna1;Target=Dv_FBgn0203763.1 113 1899 +
Chr1	stalkie_big_nohaplotig	CDS	163221315	163221426	.	+	0	Parent=Dv_FBgn0203763.1.mrna1;Target=Dv_FBgn0203763.1 1 112 +
Chr1	stalkie_big_nohaplotig	CDS	163222163	163223949	.	+	2	Parent=Dv_FBgn0203763.1.mrna1;Target=Dv_FBgn0203763.1 113 1899 +
Chr1	stalkie_big_nohaplotig	mRNA	163221779	163222184	.	-	.	ID=comp145385_c0_seq1.mrna1;geneID=comp145385_c0_seq1.path1;Name=comp145385_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.3;matches=391;mismatches=6;indels=9;unknowns=0;Target=comp145385_c0_seq1 397 1 .;CDS_Target=comp145385_c0_seq1 190 98 .;locus=RLOC_00013316
Chr1	stalkie_big_nohaplotig	exon	163221779	163222184	96	-	.	Parent=comp145385_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	163221995	163222087	.	-	0	Parent=comp145385_c0_seq1.mrna1
Chr1	gffcl	locus	163235678	163238592	.	+	.	ID=RLOC_00013317;geneIDs=comp147168_c1_seq1.path1;transcripts=comp147168_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163235678	163238592	.	+	.	ID=comp147168_c1_seq1.mrna1;geneID=comp147168_c1_seq1.path1;Name=comp147168_c1_seq1;Dir=sensecoverage=100.0;identity=99.0;matches=772;mismatches=8;indels=0;unknowns=0;Target=comp147168_c1_seq1 1 132 +;locus=RLOC_00013317
Chr1	stalkie_big_nohaplotig	exon	163235678	163235883	100	+	.	Parent=comp147168_c1_seq1.mrna1;Target=comp147168_c1_seq1 1 206 +
Chr1	stalkie_big_nohaplotig	exon	163237935	163238016	97	+	.	Parent=comp147168_c1_seq1.mrna1;Target=comp147168_c1_seq1 207 288 +
Chr1	stalkie_big_nohaplotig	exon	163238101	163238592	98	+	.	Parent=comp147168_c1_seq1.mrna1;Target=comp147168_c1_seq1 289 780 +
Chr1	stalkie_big_nohaplotig	CDS	163235678	163235809	.	+	0	Parent=comp147168_c1_seq1.mrna1
Chr1	gffcl	locus	163244002	163245399	.	-	.	ID=RLOC_00013318;geneIDs=ORF839.path1;transcripts=ORF839.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163244002	163245399	.	-	.	ID=ORF839.mrna1;geneID=ORF839.path1;Name=ORF839;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1397;mismatches=1;indels=0;unknowns=0;Target=ORF839 1398 1 .;locus=RLOC_00013318
Chr1	stalkie_big_nohaplotig	exon	163244002	163245399	99	-	.	Parent=ORF839.mrna1
Chr1	stalkie_big_nohaplotig	CDS	163244002	163245399	.	-	0	Parent=ORF839.mrna1
Chr1	gffcl	locus	163280708	163281625	.	-	.	ID=RLOC_00013320;geneIDs=ORF2755.path1;transcripts=ORF2755.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163280708	163281625	.	-	.	ID=ORF2755.mrna1;geneID=ORF2755.path1;Name=ORF2755;Dir=sensecoverage=100.0;identity=99.9;matches=809;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013320
Chr1	stalkie_big_nohaplotig	exon	163280708	163281173	99	-	.	Parent=ORF2755.mrna1;Target=ORF2755 345 810 +
Chr1	stalkie_big_nohaplotig	exon	163281230	163281427	100	-	.	Parent=ORF2755.mrna1;Target=ORF2755 147 344 +
Chr1	stalkie_big_nohaplotig	exon	163281480	163281625	100	-	.	Parent=ORF2755.mrna1;Target=ORF2755 1 146 +
Chr1	stalkie_big_nohaplotig	CDS	163280708	163281173	.	-	1	Parent=ORF2755.mrna1;Target=ORF2755 345 810 +
Chr1	stalkie_big_nohaplotig	CDS	163281230	163281427	.	-	1	Parent=ORF2755.mrna1;Target=ORF2755 147 344 +
Chr1	stalkie_big_nohaplotig	CDS	163281480	163281625	.	-	0	Parent=ORF2755.mrna1;Target=ORF2755 1 146 +
Chr1	gffcl	locus	163317034	163581807	.	-	.	ID=RLOC_00013321;geneIDs=ORF1576.path1,FBgn0086911.1.path1,comp152876_c2_seq1.path1,comp163829_c0_seq1.path1;transcripts=comp163829_c0_seq1.mrna1,FBgn0086911.1.mrna1,comp152876_c2_seq1.mrna1,ORF1576.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163317034	163581807	.	-	.	ID=comp163829_c0_seq1.mrna1;geneID=comp163829_c0_seq1.path1;Name=comp163829_c0_seq1;Dir=indeterminatecoverage=95.8;identity=98.8;matches=12025;mismatches=109;indels=33;unknowns=0;locus=RLOC_00013321
Chr1	stalkie_big_nohaplotig	exon	163317034	163317043	80	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 12712 12703 .
Chr1	stalkie_big_nohaplotig	exon	163318293	163318296	75	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 12702 12699 .
Chr1	stalkie_big_nohaplotig	exon	163325188	163325193	66	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 12698 12693 .
Chr1	stalkie_big_nohaplotig	exon	163326298	163326310	92	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 12692 12680 .
Chr1	stalkie_big_nohaplotig	exon	163327590	163327592	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 12679 12677 .
Chr1	stalkie_big_nohaplotig	exon	163336234	163336252	68	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 12676 12661 .
Chr1	stalkie_big_nohaplotig	exon	163338263	163338270	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 12660 12653 .
Chr1	stalkie_big_nohaplotig	exon	163346607	163346635	44	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 12652 12619 .
Chr1	stalkie_big_nohaplotig	exon	163357311	163357319	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 12618 12610 .
Chr1	stalkie_big_nohaplotig	exon	163357389	163357396	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 12609 12602 .
Chr1	stalkie_big_nohaplotig	exon	163360568	163360575	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 12601 12594 .
Chr1	stalkie_big_nohaplotig	exon	163373265	163375024	97	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 12572 10820 .
Chr1	stalkie_big_nohaplotig	exon	163383472	163383702	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 10819 10589 .
Chr1	stalkie_big_nohaplotig	exon	163392374	163392484	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 10588 10478 .
Chr1	stalkie_big_nohaplotig	exon	163393185	163393336	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 10477 10326 .
Chr1	stalkie_big_nohaplotig	exon	163393493	163393689	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 10325 10129 .
Chr1	stalkie_big_nohaplotig	exon	163393791	163394054	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 10128 9865 .
Chr1	stalkie_big_nohaplotig	exon	163394117	163394287	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 9864 9694 .
Chr1	stalkie_big_nohaplotig	exon	163394382	163397190	99	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 9693 6885 .
Chr1	stalkie_big_nohaplotig	exon	163404389	163404589	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 6884 6684 .
Chr1	stalkie_big_nohaplotig	exon	163406305	163406414	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 6683 6574 .
Chr1	stalkie_big_nohaplotig	exon	163414605	163414752	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 6573 6426 .
Chr1	stalkie_big_nohaplotig	exon	163415671	163415778	97	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 6425 6318 .
Chr1	stalkie_big_nohaplotig	exon	163416198	163416512	99	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 6317 6003 .
Chr1	stalkie_big_nohaplotig	exon	163416611	163416930	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 6002 5683 .
Chr1	stalkie_big_nohaplotig	exon	163418016	163420274	99	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 5682 3424 .
Chr1	stalkie_big_nohaplotig	exon	163420481	163420671	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 3423 3233 .
Chr1	stalkie_big_nohaplotig	exon	163420826	163421016	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 3232 3042 .
Chr1	stalkie_big_nohaplotig	exon	163421696	163421838	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 3041 2899 .
Chr1	stalkie_big_nohaplotig	exon	163421912	163422164	99	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 2898 2646 .
Chr1	stalkie_big_nohaplotig	exon	163428148	163428361	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 2645 2432 .
Chr1	stalkie_big_nohaplotig	exon	163429377	163429516	99	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 2431 2292 .
Chr1	stalkie_big_nohaplotig	exon	163431125	163431265	99	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 2291 2151 .
Chr1	stalkie_big_nohaplotig	exon	163433884	163433978	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 2150 2056 .
Chr1	stalkie_big_nohaplotig	exon	163434115	163434502	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 2055 1668 .
Chr1	stalkie_big_nohaplotig	exon	163435448	163435594	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 1667 1521 .
Chr1	stalkie_big_nohaplotig	exon	163436321	163436440	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 1520 1401 .
Chr1	stalkie_big_nohaplotig	exon	163436812	163436938	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 1400 1274 .
Chr1	stalkie_big_nohaplotig	exon	163437081	163437202	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 1273 1152 .
Chr1	stalkie_big_nohaplotig	exon	163441329	163441525	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 1151 955 .
Chr1	stalkie_big_nohaplotig	exon	163449040	163449166	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 954 828 .
Chr1	stalkie_big_nohaplotig	exon	163471585	163471718	86	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 827 700 .
Chr1	stalkie_big_nohaplotig	exon	163489275	163489282	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 652 645 .
Chr1	stalkie_big_nohaplotig	exon	163489298	163489325	47	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 602 567 .
Chr1	stalkie_big_nohaplotig	exon	163494414	163494426	84	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 566 554 .
Chr1	stalkie_big_nohaplotig	exon	163502232	163502234	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 553 551 .
Chr1	stalkie_big_nohaplotig	exon	163508444	163508452	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 550 542 .
Chr1	stalkie_big_nohaplotig	exon	163511539	163511540	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 541 540 .
Chr1	stalkie_big_nohaplotig	exon	163514377	163514382	83	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 539 534 .
Chr1	stalkie_big_nohaplotig	exon	163516079	163516085	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 533 527 .
Chr1	stalkie_big_nohaplotig	exon	163516818	163516821	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 526 523 .
Chr1	stalkie_big_nohaplotig	exon	163517994	163517997	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 522 519 .
Chr1	stalkie_big_nohaplotig	exon	163525364	163525370	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 518 512 .
Chr1	stalkie_big_nohaplotig	exon	163528349	163528355	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 511 505 .
Chr1	stalkie_big_nohaplotig	exon	163549560	163549562	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 504 502 .
Chr1	stalkie_big_nohaplotig	exon	163556165	163556166	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 501 500 .
Chr1	stalkie_big_nohaplotig	exon	163558612	163558613	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 499 498 .
Chr1	stalkie_big_nohaplotig	exon	163562652	163562654	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 497 495 .
Chr1	stalkie_big_nohaplotig	exon	163570918	163570924	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 494 488 .
Chr1	stalkie_big_nohaplotig	exon	163573388	163573393	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 487 482 .
Chr1	stalkie_big_nohaplotig	exon	163574947	163574951	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 481 477 .
Chr1	stalkie_big_nohaplotig	exon	163575554	163575561	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 476 469 .
Chr1	stalkie_big_nohaplotig	exon	163576452	163576456	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 468 464 .
Chr1	stalkie_big_nohaplotig	exon	163581799	163581807	100	-	.	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 463 455 .
Chr1	stalkie_big_nohaplotig	CDS	163392394	163392484	.	-	1	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 10568 10478 .
Chr1	stalkie_big_nohaplotig	CDS	163393185	163393336	.	-	0	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 10477 10326 .
Chr1	stalkie_big_nohaplotig	CDS	163393493	163393689	.	-	2	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 10325 10129 .
Chr1	stalkie_big_nohaplotig	CDS	163393791	163394054	.	-	2	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 10128 9865 .
Chr1	stalkie_big_nohaplotig	CDS	163394117	163394287	.	-	2	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 9864 9694 .
Chr1	stalkie_big_nohaplotig	CDS	163394382	163397190	.	-	0	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 9693 6885 .
Chr1	stalkie_big_nohaplotig	CDS	163404389	163404589	.	-	0	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 6884 6684 .
Chr1	stalkie_big_nohaplotig	CDS	163406305	163406414	.	-	2	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 6683 6574 .
Chr1	stalkie_big_nohaplotig	CDS	163414605	163414752	.	-	0	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 6573 6426 .
Chr1	stalkie_big_nohaplotig	CDS	163415671	163415778	.	-	0	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 6425 6318 .
Chr1	stalkie_big_nohaplotig	CDS	163416198	163416512	.	-	0	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 6317 6003 .
Chr1	stalkie_big_nohaplotig	CDS	163416611	163416930	.	-	2	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 6002 5683 .
Chr1	stalkie_big_nohaplotig	CDS	163418016	163420274	.	-	2	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 5682 3424 .
Chr1	stalkie_big_nohaplotig	CDS	163420481	163420671	.	-	1	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 3423 3233 .
Chr1	stalkie_big_nohaplotig	CDS	163420826	163421016	.	-	0	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 3232 3042 .
Chr1	stalkie_big_nohaplotig	CDS	163421696	163421838	.	-	2	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 3041 2899 .
Chr1	stalkie_big_nohaplotig	CDS	163421912	163422164	.	-	0	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 2898 2646 .
Chr1	stalkie_big_nohaplotig	CDS	163428148	163428361	.	-	1	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 2645 2432 .
Chr1	stalkie_big_nohaplotig	CDS	163429377	163429516	.	-	0	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 2431 2292 .
Chr1	stalkie_big_nohaplotig	CDS	163431125	163431265	.	-	0	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 2291 2151 .
Chr1	stalkie_big_nohaplotig	CDS	163433884	163433978	.	-	2	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 2150 2056 .
Chr1	stalkie_big_nohaplotig	CDS	163434115	163434502	.	-	0	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 2055 1668 .
Chr1	stalkie_big_nohaplotig	CDS	163435448	163435594	.	-	0	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 1667 1521 .
Chr1	stalkie_big_nohaplotig	CDS	163436321	163436440	.	-	0	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 1520 1401 .
Chr1	stalkie_big_nohaplotig	CDS	163436812	163436938	.	-	1	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 1400 1274 .
Chr1	stalkie_big_nohaplotig	CDS	163437081	163437202	.	-	0	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 1273 1152 .
Chr1	stalkie_big_nohaplotig	CDS	163441329	163441525	.	-	2	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 1151 955 .
Chr1	stalkie_big_nohaplotig	CDS	163449040	163449166	.	-	0	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 954 828 .
Chr1	stalkie_big_nohaplotig	CDS	163471585	163471668	.	-	0	Parent=comp163829_c0_seq1.mrna1;Target=comp163829_c0_seq1 827 744 .
Chr1	stalkie_big_nohaplotig	mRNA	163392397	163471690	.	-	.	ID=FBgn0086911.1.mrna1;geneID=FBgn0086911.1.path1;Name=FBgn0086911.1;Dir=sensecoverage=98.3;identity=99.7;matches=9585;mismatches=28;indels=0;unknowns=0;locus=RLOC_00013321
Chr1	stalkie_big_nohaplotig	exon	163392397	163392484	100	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 9690 9777 +
Chr1	stalkie_big_nohaplotig	exon	163393185	163393336	100	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 9538 9689 +
Chr1	stalkie_big_nohaplotig	exon	163393493	163393689	100	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 9341 9537 +
Chr1	stalkie_big_nohaplotig	exon	163393791	163394054	100	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 9077 9340 +
Chr1	stalkie_big_nohaplotig	exon	163394117	163394287	100	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 8906 9076 +
Chr1	stalkie_big_nohaplotig	exon	163394382	163397190	99	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 6097 8905 +
Chr1	stalkie_big_nohaplotig	exon	163406305	163406414	100	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 5987 6096 +
Chr1	stalkie_big_nohaplotig	exon	163414605	163414752	100	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 5839 5986 +
Chr1	stalkie_big_nohaplotig	exon	163415671	163415778	97	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 5731 5838 +
Chr1	stalkie_big_nohaplotig	exon	163416198	163416512	99	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 5416 5730 +
Chr1	stalkie_big_nohaplotig	exon	163416611	163416930	100	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 5096 5415 +
Chr1	stalkie_big_nohaplotig	exon	163418016	163420274	99	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 2837 5095 +
Chr1	stalkie_big_nohaplotig	exon	163420481	163420671	100	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 2646 2836 +
Chr1	stalkie_big_nohaplotig	exon	163420826	163421016	100	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 2455 2645 +
Chr1	stalkie_big_nohaplotig	exon	163421696	163421838	100	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 2312 2454 +
Chr1	stalkie_big_nohaplotig	exon	163421912	163422134	99	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 2089 2311 +
Chr1	stalkie_big_nohaplotig	exon	163428148	163428361	100	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 1875 2088 +
Chr1	stalkie_big_nohaplotig	exon	163429377	163429516	99	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 1735 1874 +
Chr1	stalkie_big_nohaplotig	exon	163431125	163431265	99	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 1594 1734 +
Chr1	stalkie_big_nohaplotig	exon	163433884	163433978	100	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 1499 1593 +
Chr1	stalkie_big_nohaplotig	exon	163434115	163434502	100	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 1111 1498 +
Chr1	stalkie_big_nohaplotig	exon	163435448	163435594	100	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 964 1110 +
Chr1	stalkie_big_nohaplotig	exon	163436321	163436440	100	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 844 963 +
Chr1	stalkie_big_nohaplotig	exon	163436812	163436938	100	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 717 843 +
Chr1	stalkie_big_nohaplotig	exon	163437081	163437202	100	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 595 716 +
Chr1	stalkie_big_nohaplotig	exon	163441329	163441525	100	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 398 594 +
Chr1	stalkie_big_nohaplotig	exon	163449040	163449166	100	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 271 397 +
Chr1	stalkie_big_nohaplotig	exon	163471585	163471690	98	-	.	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 165 270 +
Chr1	stalkie_big_nohaplotig	CDS	163392397	163392484	.	-	1	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 9690 9777 +
Chr1	stalkie_big_nohaplotig	CDS	163393185	163393336	.	-	0	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 9538 9689 +
Chr1	stalkie_big_nohaplotig	CDS	163393493	163393689	.	-	2	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 9341 9537 +
Chr1	stalkie_big_nohaplotig	CDS	163393791	163394054	.	-	2	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 9077 9340 +
Chr1	stalkie_big_nohaplotig	CDS	163394117	163394287	.	-	2	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 8906 9076 +
Chr1	stalkie_big_nohaplotig	CDS	163394382	163397190	.	-	0	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 6097 8905 +
Chr1	stalkie_big_nohaplotig	CDS	163406305	163406414	.	-	2	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 5987 6096 +
Chr1	stalkie_big_nohaplotig	CDS	163414605	163414752	.	-	0	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 5839 5986 +
Chr1	stalkie_big_nohaplotig	CDS	163415671	163415778	.	-	0	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 5731 5838 +
Chr1	stalkie_big_nohaplotig	CDS	163416198	163416512	.	-	0	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 5416 5730 +
Chr1	stalkie_big_nohaplotig	CDS	163416611	163416930	.	-	2	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 5096 5415 +
Chr1	stalkie_big_nohaplotig	CDS	163418016	163420274	.	-	2	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 2837 5095 +
Chr1	stalkie_big_nohaplotig	CDS	163420481	163420671	.	-	1	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 2646 2836 +
Chr1	stalkie_big_nohaplotig	CDS	163420826	163421016	.	-	0	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 2455 2645 +
Chr1	stalkie_big_nohaplotig	CDS	163421696	163421838	.	-	2	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 2312 2454 +
Chr1	stalkie_big_nohaplotig	CDS	163421912	163422134	.	-	0	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 2089 2311 +
Chr1	stalkie_big_nohaplotig	CDS	163428148	163428361	.	-	1	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 1875 2088 +
Chr1	stalkie_big_nohaplotig	CDS	163429377	163429516	.	-	0	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 1735 1874 +
Chr1	stalkie_big_nohaplotig	CDS	163431125	163431265	.	-	0	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 1594 1734 +
Chr1	stalkie_big_nohaplotig	CDS	163433884	163433978	.	-	2	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 1499 1593 +
Chr1	stalkie_big_nohaplotig	CDS	163434115	163434502	.	-	0	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 1111 1498 +
Chr1	stalkie_big_nohaplotig	CDS	163435448	163435594	.	-	0	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 964 1110 +
Chr1	stalkie_big_nohaplotig	CDS	163436321	163436440	.	-	0	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 844 963 +
Chr1	stalkie_big_nohaplotig	CDS	163436812	163436938	.	-	1	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 717 843 +
Chr1	stalkie_big_nohaplotig	CDS	163437081	163437202	.	-	0	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 595 716 +
Chr1	stalkie_big_nohaplotig	CDS	163441329	163441525	.	-	2	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 398 594 +
Chr1	stalkie_big_nohaplotig	CDS	163449040	163449166	.	-	0	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 271 397 +
Chr1	stalkie_big_nohaplotig	CDS	163471585	163471689	.	-	0	Parent=FBgn0086911.1.mrna1;Target=FBgn0086911.1 166 270 +
Chr1	stalkie_big_nohaplotig	mRNA	163406392	163412631	.	-	.	ID=comp152876_c2_seq1.mrna1;geneID=comp152876_c2_seq1.path1;Name=comp152876_c2_seq1;Dir=sensecoverage=99.8;identity=99.5;matches=624;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013321
Chr1	stalkie_big_nohaplotig	exon	163406392	163406414	100	-	.	Parent=comp152876_c2_seq1.mrna1;Target=comp152876_c2_seq1 606 628 +
Chr1	stalkie_big_nohaplotig	exon	163412028	163412631	99	-	.	Parent=comp152876_c2_seq1.mrna1;Target=comp152876_c2_seq1 2 605 +
Chr1	stalkie_big_nohaplotig	CDS	163406392	163406414	.	-	2	Parent=comp152876_c2_seq1.mrna1;Target=comp152876_c2_seq1 606 628 +
Chr1	stalkie_big_nohaplotig	CDS	163412028	163412631	.	-	0	Parent=comp152876_c2_seq1.mrna1;Target=comp152876_c2_seq1 2 605 +
Chr1	stalkie_big_nohaplotig	mRNA	163493416	163494548	.	-	.	ID=ORF1576.mrna1;geneID=ORF1576.path1;Name=ORF1576;Dir=sensecoverage=99.8;identity=98.0;matches=1033;mismatches=15;indels=6;unknowns=0;locus=RLOC_00013321
Chr1	stalkie_big_nohaplotig	exon	163493416	163494288	99	-	.	Parent=ORF1576.mrna1;Target=ORF1576 184 1056 +
Chr1	stalkie_big_nohaplotig	exon	163494374	163494548	90	-	.	Parent=ORF1576.mrna1;Target=ORF1576 3 183 +
Chr1	stalkie_big_nohaplotig	CDS	163493416	163494288	.	-	0	Parent=ORF1576.mrna1;Target=ORF1576 184 1056 +
Chr1	stalkie_big_nohaplotig	CDS	163494374	163494547	.	-	0	Parent=ORF1576.mrna1;Target=ORF1576 4 183 +
Chr1	gffcl	locus	163379926	163393733	.	-	.	ID=RLOC_00013322;geneIDs=comp175091_c0_seq1.path1;transcripts=comp175091_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163379926	163393733	.	-	.	ID=comp175091_c0_seq1.mrna1;geneID=comp175091_c0_seq1.path1;Name=comp175091_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.5;matches=859;mismatches=3;indels=1;unknowns=0;locus=RLOC_00013322
Chr1	stalkie_big_nohaplotig	exon	163379926	163380618	99	-	.	Parent=comp175091_c0_seq1.mrna1;Target=comp175091_c0_seq1 884 192 .
Chr1	stalkie_big_nohaplotig	exon	163389077	163389216	100	-	.	Parent=comp175091_c0_seq1.mrna1;Target=comp175091_c0_seq1 191 52 .
Chr1	stalkie_big_nohaplotig	exon	163393706	163393733	89	-	.	Parent=comp175091_c0_seq1.mrna1;Target=comp175091_c0_seq1 33 7 .
Chr1	stalkie_big_nohaplotig	CDS	163389176	163389216	.	-	1	Parent=comp175091_c0_seq1.mrna1;Target=comp175091_c0_seq1 92 52 .
Chr1	stalkie_big_nohaplotig	CDS	163393706	163393731	.	-	0	Parent=comp175091_c0_seq1.mrna1;Target=comp175091_c0_seq1 33 9 .
Chr1	gffcl	locus	163459982	163460536	.	+	.	ID=RLOC_00013323;geneIDs=comp155044_c0_seq1.path1;transcripts=comp155044_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163459982	163460536	.	+	.	ID=comp155044_c0_seq1.mrna1;geneID=comp155044_c0_seq1.path1;Name=comp155044_c0_seq1;Dir=sensecoverage=95.7;identity=95.1;matches=490;mismatches=6;indels=19;unknowns=0;locus=RLOC_00013323
Chr1	stalkie_big_nohaplotig	exon	163459982	163460184	99	+	.	Parent=comp155044_c0_seq1.mrna1;Target=comp155044_c0_seq1 2 204 +
Chr1	stalkie_big_nohaplotig	exon	163460244	163460536	92	+	.	Parent=comp155044_c0_seq1.mrna1;Target=comp155044_c0_seq1 205 516 +
Chr1	stalkie_big_nohaplotig	CDS	163460041	163460184	.	+	0	Parent=comp155044_c0_seq1.mrna1;Target=comp155044_c0_seq1 61 204 +
Chr1	stalkie_big_nohaplotig	CDS	163460244	163460378	.	+	0	Parent=comp155044_c0_seq1.mrna1;Target=comp155044_c0_seq1 205 339 +
Chr1	gffcl	locus	163491924	163492695	.	-	.	ID=RLOC_00013324;geneIDs=FBgn0034133.path1;transcripts=FBgn0034133.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163491924	163492695	.	-	.	ID=FBgn0034133.mrna1;geneID=FBgn0034133.path1;Name=FBgn0034133;Dir=sensecoverage=100.0;identity=99.8;matches=632;mismatches=0;indels=1;unknowns=0;locus=RLOC_00013324
Chr1	stalkie_big_nohaplotig	exon	163491924	163492234	99	-	.	Parent=FBgn0034133.mrna1;Target=FBgn0034133 322 633 +
Chr1	stalkie_big_nohaplotig	exon	163492320	163492518	100	-	.	Parent=FBgn0034133.mrna1;Target=FBgn0034133 123 321 +
Chr1	stalkie_big_nohaplotig	exon	163492574	163492695	100	-	.	Parent=FBgn0034133.mrna1;Target=FBgn0034133 1 122 +
Chr1	stalkie_big_nohaplotig	CDS	163491924	163492234	.	-	0	Parent=FBgn0034133.mrna1;Target=FBgn0034133 322 633 +
Chr1	stalkie_big_nohaplotig	CDS	163492320	163492518	.	-	1	Parent=FBgn0034133.mrna1;Target=FBgn0034133 123 321 +
Chr1	stalkie_big_nohaplotig	CDS	163492574	163492695	.	-	0	Parent=FBgn0034133.mrna1;Target=FBgn0034133 1 122 +
Chr1	gffcl	locus	163508930	163509998	.	-	.	ID=RLOC_00013325;geneIDs=Dp_FBgn0244739.path5;transcripts=Dp_FBgn0244739.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	163508930	163509998	.	-	.	ID=Dp_FBgn0244739.mrna5;geneID=Dp_FBgn0244739.path5;Name=Dp_FBgn0244739;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1058;mismatches=10;indels=1;unknowns=0;Target=Dp_FBgn0244739 1068 1 .;CDS_Target=Dp_FBgn0244739 148 2 .;locus=RLOC_00013325
Chr1	stalkie_big_nohaplotig	exon	163508930	163509998	98	-	.	Parent=Dp_FBgn0244739.mrna5
Chr1	stalkie_big_nohaplotig	CDS	163509850	163509997	.	-	0	Parent=Dp_FBgn0244739.mrna5
Chr1	gffcl	locus	163595827	163597961	.	+	.	ID=RLOC_00013327;geneIDs=FBgn0038416.1.path1;transcripts=FBgn0038416.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163595827	163597961	.	+	.	ID=FBgn0038416.1.mrna1;geneID=FBgn0038416.1.path1;Name=FBgn0038416.1;Dir=sensecoverage=100.0;identity=98.7;matches=1350;mismatches=18;indels=0;unknowns=0;locus=RLOC_00013327
Chr1	stalkie_big_nohaplotig	exon	163595827	163595902	96	+	.	Parent=FBgn0038416.1.mrna1;Target=FBgn0038416.1 1 76 +
Chr1	stalkie_big_nohaplotig	exon	163596614	163596786	96	+	.	Parent=FBgn0038416.1.mrna1;Target=FBgn0038416.1 77 249 +
Chr1	stalkie_big_nohaplotig	exon	163596843	163597961	99	+	.	Parent=FBgn0038416.1.mrna1;Target=FBgn0038416.1 250 1368 +
Chr1	stalkie_big_nohaplotig	CDS	163595827	163595902	.	+	0	Parent=FBgn0038416.1.mrna1;Target=FBgn0038416.1 1 76 +
Chr1	stalkie_big_nohaplotig	CDS	163596614	163596786	.	+	2	Parent=FBgn0038416.1.mrna1;Target=FBgn0038416.1 77 249 +
Chr1	stalkie_big_nohaplotig	CDS	163596843	163597961	.	+	0	Parent=FBgn0038416.1.mrna1;Target=FBgn0038416.1 250 1368 +
Chr1	gffcl	locus	163609389	164077726	.	-	.	ID=RLOC_00013328;geneIDs=comp162650_c0_seq1.path1;transcripts=comp162650_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163609389	164077726	.	-	.	ID=comp162650_c0_seq1.mrna1;geneID=comp162650_c0_seq1.path1;Name=comp162650_c0_seq1;Dir=indeterminatecoverage=93.3;identity=80.3;matches=688;mismatches=52;indels=117;unknowns=0;Target=comp162650_c0_seq1 486 448 .;locus=RLOC_00013328
Chr1	stalkie_big_nohaplotig	exon	163609389	163609395	100	-	.	Parent=comp162650_c0_seq1.mrna1;Target=comp162650_c0_seq1 867 861 .
Chr1	stalkie_big_nohaplotig	exon	163611990	163611991	100	-	.	Parent=comp162650_c0_seq1.mrna1;Target=comp162650_c0_seq1 860 859 .
Chr1	stalkie_big_nohaplotig	exon	163612597	163612605	100	-	.	Parent=comp162650_c0_seq1.mrna1;Target=comp162650_c0_seq1 858 850 .
Chr1	stalkie_big_nohaplotig	exon	163619325	163619326	100	-	.	Parent=comp162650_c0_seq1.mrna1;Target=comp162650_c0_seq1 849 848 .
Chr1	stalkie_big_nohaplotig	exon	163619762	163619772	90	-	.	Parent=comp162650_c0_seq1.mrna1;Target=comp162650_c0_seq1 847 837 .
Chr1	stalkie_big_nohaplotig	exon	163995113	163995170	44	-	.	Parent=comp162650_c0_seq1.mrna1;Target=comp162650_c0_seq1 836 785 .
Chr1	stalkie_big_nohaplotig	exon	163999672	163999684	100	-	.	Parent=comp162650_c0_seq1.mrna1;Target=comp162650_c0_seq1 765 753 .
Chr1	stalkie_big_nohaplotig	exon	164077080	164077726	82	-	.	Parent=comp162650_c0_seq1.mrna1;Target=comp162650_c0_seq1 752 1 .
Chr1	stalkie_big_nohaplotig	CDS	164077276	164077280	.	-	0	Parent=comp162650_c0_seq1.mrna1
Chr1	gffcl	locus	163627985	163629100	.	+	.	ID=RLOC_00013329;geneIDs=FBgn0031003.1.path1;transcripts=FBgn0031003.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163627985	163629100	.	+	.	ID=FBgn0031003.1.mrna1;geneID=FBgn0031003.1.path1;Name=FBgn0031003.1;Dir=sensecoverage=100.0;identity=100.0;matches=1005;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013329
Chr1	stalkie_big_nohaplotig	exon	163627985	163628073	100	+	.	Parent=FBgn0031003.1.mrna1;Target=FBgn0031003.1 1 89 +
Chr1	stalkie_big_nohaplotig	exon	163628127	163628932	100	+	.	Parent=FBgn0031003.1.mrna1;Target=FBgn0031003.1 90 895 +
Chr1	stalkie_big_nohaplotig	exon	163628991	163629100	100	+	.	Parent=FBgn0031003.1.mrna1;Target=FBgn0031003.1 896 1005 +
Chr1	stalkie_big_nohaplotig	CDS	163627985	163628073	.	+	0	Parent=FBgn0031003.1.mrna1;Target=FBgn0031003.1 1 89 +
Chr1	stalkie_big_nohaplotig	CDS	163628127	163628932	.	+	1	Parent=FBgn0031003.1.mrna1;Target=FBgn0031003.1 90 895 +
Chr1	stalkie_big_nohaplotig	CDS	163628991	163629100	.	+	2	Parent=FBgn0031003.1.mrna1;Target=FBgn0031003.1 896 1005 +
Chr1	gffcl	locus	163629347	163633008	.	-	.	ID=RLOC_00013330;geneIDs=FBgn0031004.1.path1;transcripts=FBgn0031004.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163629347	163633008	.	-	.	ID=FBgn0031004.1.mrna1;geneID=FBgn0031004.1.path1;Name=FBgn0031004.1;Dir=sensecoverage=100.0;identity=99.7;matches=1454;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013330
Chr1	stalkie_big_nohaplotig	exon	163629347	163630473	99	-	.	Parent=FBgn0031004.1.mrna1;Target=FBgn0031004.1 332 1458 +
Chr1	stalkie_big_nohaplotig	exon	163632608	163632865	99	-	.	Parent=FBgn0031004.1.mrna1;Target=FBgn0031004.1 74 331 +
Chr1	stalkie_big_nohaplotig	exon	163632936	163633008	100	-	.	Parent=FBgn0031004.1.mrna1;Target=FBgn0031004.1 1 73 +
Chr1	stalkie_big_nohaplotig	CDS	163629347	163630473	.	-	2	Parent=FBgn0031004.1.mrna1;Target=FBgn0031004.1 332 1458 +
Chr1	stalkie_big_nohaplotig	CDS	163632608	163632865	.	-	2	Parent=FBgn0031004.1.mrna1;Target=FBgn0031004.1 74 331 +
Chr1	stalkie_big_nohaplotig	CDS	163632936	163633008	.	-	0	Parent=FBgn0031004.1.mrna1;Target=FBgn0031004.1 1 73 +
Chr1	gffcl	locus	163634129	163635665	.	-	.	ID=RLOC_00013331;geneIDs=FBgn0035313.1.path1;transcripts=FBgn0035313.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163634129	163635665	.	-	.	ID=FBgn0035313.1.mrna1;geneID=FBgn0035313.1.path1;Name=FBgn0035313.1;Dir=sensecoverage=100.0;identity=99.5;matches=1406;mismatches=7;indels=0;unknowns=0;locus=RLOC_00013331
Chr1	stalkie_big_nohaplotig	exon	163634129	163635243	99	-	.	Parent=FBgn0035313.1.mrna1;Target=FBgn0035313.1 299 1413 +
Chr1	stalkie_big_nohaplotig	exon	163635306	163635551	100	-	.	Parent=FBgn0035313.1.mrna1;Target=FBgn0035313.1 53 298 +
Chr1	stalkie_big_nohaplotig	exon	163635614	163635665	100	-	.	Parent=FBgn0035313.1.mrna1;Target=FBgn0035313.1 1 52 +
Chr1	stalkie_big_nohaplotig	CDS	163634129	163635243	.	-	2	Parent=FBgn0035313.1.mrna1;Target=FBgn0035313.1 299 1413 +
Chr1	stalkie_big_nohaplotig	CDS	163635306	163635551	.	-	2	Parent=FBgn0035313.1.mrna1;Target=FBgn0035313.1 53 298 +
Chr1	stalkie_big_nohaplotig	CDS	163635614	163635665	.	-	0	Parent=FBgn0035313.1.mrna1;Target=FBgn0035313.1 1 52 +
Chr1	gffcl	locus	163637663	163639517	.	+	.	ID=RLOC_00013332;geneIDs=FBgn0029928.1.path1;transcripts=FBgn0029928.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163637663	163639517	.	+	.	ID=FBgn0029928.1.mrna1;geneID=FBgn0029928.1.path1;Name=FBgn0029928.1;Dir=sensecoverage=100.0;identity=99.4;matches=1786;mismatches=11;indels=0;unknowns=0;locus=RLOC_00013332
Chr1	stalkie_big_nohaplotig	exon	163637663	163638100	99	+	.	Parent=FBgn0029928.1.mrna1;Target=FBgn0029928.1 1 438 +
Chr1	stalkie_big_nohaplotig	exon	163638159	163639517	99	+	.	Parent=FBgn0029928.1.mrna1;Target=FBgn0029928.1 439 1797 +
Chr1	stalkie_big_nohaplotig	CDS	163637663	163638100	.	+	0	Parent=FBgn0029928.1.mrna1;Target=FBgn0029928.1 1 438 +
Chr1	stalkie_big_nohaplotig	CDS	163638159	163639517	.	+	0	Parent=FBgn0029928.1.mrna1;Target=FBgn0029928.1 439 1797 +
Chr1	gffcl	locus	163642099	163642749	.	+	.	ID=RLOC_00013333;geneIDs=FBgn0029915.1.path1;transcripts=FBgn0029915.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163642099	163642749	.	+	.	ID=FBgn0029915.1.mrna1;geneID=FBgn0029915.1.path1;Name=FBgn0029915.1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=645;mismatches=6;indels=0;unknowns=0;Target=FBgn0029915.1 651 1 .;locus=RLOC_00013333
Chr1	stalkie_big_nohaplotig	exon	163642099	163642749	99	+	.	Parent=FBgn0029915.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	163642099	163642749	.	+	0	Parent=FBgn0029915.1.mrna1
Chr1	gffcl	locus	163645016	163647408	.	-	.	ID=RLOC_00013334;geneIDs=FBgn0029914.1.path1;transcripts=FBgn0029914.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163645016	163647408	.	-	.	ID=FBgn0029914.1.mrna1;geneID=FBgn0029914.1.path1;Name=FBgn0029914.1;Dir=sensecoverage=100.0;identity=99.8;matches=1230;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013334
Chr1	stalkie_big_nohaplotig	exon	163645016	163645104	100	-	.	Parent=FBgn0029914.1.mrna1;Target=FBgn0029914.1 1145 1233 +
Chr1	stalkie_big_nohaplotig	exon	163646204	163646672	100	-	.	Parent=FBgn0029914.1.mrna1;Target=FBgn0029914.1 676 1144 +
Chr1	stalkie_big_nohaplotig	exon	163646734	163647408	99	-	.	Parent=FBgn0029914.1.mrna1;Target=FBgn0029914.1 1 675 +
Chr1	stalkie_big_nohaplotig	CDS	163645016	163645104	.	-	2	Parent=FBgn0029914.1.mrna1;Target=FBgn0029914.1 1145 1233 +
Chr1	stalkie_big_nohaplotig	CDS	163646204	163646672	.	-	0	Parent=FBgn0029914.1.mrna1;Target=FBgn0029914.1 676 1144 +
Chr1	stalkie_big_nohaplotig	CDS	163646734	163647408	.	-	0	Parent=FBgn0029914.1.mrna1;Target=FBgn0029914.1 1 675 +
Chr1	gffcl	locus	163652815	163654777	.	+	.	ID=RLOC_00013336;geneIDs=FBgn0029067.1.path1;transcripts=FBgn0029067.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163652815	163654777	.	+	.	ID=FBgn0029067.1.mrna1;geneID=FBgn0029067.1.path1;Name=FBgn0029067.1;Dir=sensecoverage=100.0;identity=99.6;matches=741;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013336
Chr1	stalkie_big_nohaplotig	exon	163652815	163652928	100	+	.	Parent=FBgn0029067.1.mrna1;Target=FBgn0029067.1 1 114 +
Chr1	stalkie_big_nohaplotig	exon	163654000	163654257	100	+	.	Parent=FBgn0029067.1.mrna1;Target=FBgn0029067.1 115 372 +
Chr1	stalkie_big_nohaplotig	exon	163654329	163654511	100	+	.	Parent=FBgn0029067.1.mrna1;Target=FBgn0029067.1 373 555 +
Chr1	stalkie_big_nohaplotig	exon	163654589	163654777	98	+	.	Parent=FBgn0029067.1.mrna1;Target=FBgn0029067.1 556 744 +
Chr1	stalkie_big_nohaplotig	CDS	163652815	163652928	.	+	0	Parent=FBgn0029067.1.mrna1;Target=FBgn0029067.1 1 114 +
Chr1	stalkie_big_nohaplotig	CDS	163654000	163654257	.	+	0	Parent=FBgn0029067.1.mrna1;Target=FBgn0029067.1 115 372 +
Chr1	stalkie_big_nohaplotig	CDS	163654329	163654511	.	+	0	Parent=FBgn0029067.1.mrna1;Target=FBgn0029067.1 373 555 +
Chr1	stalkie_big_nohaplotig	CDS	163654589	163654777	.	+	0	Parent=FBgn0029067.1.mrna1;Target=FBgn0029067.1 556 744 +
Chr1	gffcl	locus	163655967	163658036	.	+	.	ID=RLOC_00013337;geneIDs=comp161905_c0_seq1.path1;transcripts=comp161905_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163655967	163658036	.	+	.	ID=comp161905_c0_seq1.mrna1;geneID=comp161905_c0_seq1.path1;Name=comp161905_c0_seq1;Dir=indeterminatecoverage=98.2;identity=98.3;matches=2040;mismatches=24;indels=12;unknowns=0;Target=comp161905_c0_seq1 2106 37 .;CDS_Target=comp161905_c0_seq1 1231 1109 .;locus=RLOC_00013337
Chr1	stalkie_big_nohaplotig	exon	163655967	163658036	98	+	.	Parent=comp161905_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	163657044	163657166	.	+	0	Parent=comp161905_c0_seq1.mrna1
Chr1	gffcl	locus	163664751	163669827	.	+	.	ID=RLOC_00013338;geneIDs=FBgn0030486.1.path1;transcripts=FBgn0030486.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163664751	163669827	.	+	.	ID=FBgn0030486.1.mrna1;geneID=FBgn0030486.1.path1;Name=FBgn0030486.1;Dir=sensecoverage=100.0;identity=99.4;matches=4530;mismatches=26;indels=1;unknowns=0;Target=FBgn0030486.1 3 113 +;locus=RLOC_00013338
Chr1	stalkie_big_nohaplotig	exon	163664751	163667995	99	+	.	Parent=FBgn0030486.1.mrna1;Target=FBgn0030486.1 1 3246 +
Chr1	stalkie_big_nohaplotig	exon	163668064	163668487	99	+	.	Parent=FBgn0030486.1.mrna1;Target=FBgn0030486.1 3247 3670 +
Chr1	stalkie_big_nohaplotig	exon	163668569	163668666	100	+	.	Parent=FBgn0030486.1.mrna1;Target=FBgn0030486.1 3671 3768 +
Chr1	stalkie_big_nohaplotig	exon	163668909	163669339	98	+	.	Parent=FBgn0030486.1.mrna1;Target=FBgn0030486.1 3769 4199 +
Chr1	stalkie_big_nohaplotig	exon	163669409	163669577	100	+	.	Parent=FBgn0030486.1.mrna1;Target=FBgn0030486.1 4200 4368 +
Chr1	stalkie_big_nohaplotig	exon	163669639	163669827	99	+	.	Parent=FBgn0030486.1.mrna1;Target=FBgn0030486.1 4369 4557 +
Chr1	stalkie_big_nohaplotig	CDS	163664753	163664862	.	+	0	Parent=FBgn0030486.1.mrna1
Chr1	gffcl	locus	163672183	163673529	.	+	.	ID=RLOC_00013339;geneIDs=FBgn0032793.1.path1;transcripts=FBgn0032793.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163672183	163673529	.	+	.	ID=FBgn0032793.1.mrna1;geneID=FBgn0032793.1.path1;Name=FBgn0032793.1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=1326;mismatches=21;indels=0;unknowns=0;Target=FBgn0032793.1 1347 1 .;locus=RLOC_00013339
Chr1	stalkie_big_nohaplotig	exon	163672183	163673529	98	+	.	Parent=FBgn0032793.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	163672183	163673529	.	+	0	Parent=FBgn0032793.1.mrna1
Chr1	gffcl	locus	163674388	163675042	.	-	.	ID=RLOC_00013340;geneIDs=comp148140_c0_seq1.path1;transcripts=comp148140_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163674388	163675042	.	-	.	ID=comp148140_c0_seq1.mrna1;geneID=comp148140_c0_seq1.path1;Name=comp148140_c0_seq1;Dir=indeterminatecoverage=96.0;identity=92.5;matches=553;mismatches=24;indels=21;unknowns=0;Target=comp148140_c0_seq1 498 361 .;locus=RLOC_00013340
Chr1	stalkie_big_nohaplotig	exon	163674388	163674850	93	-	.	Parent=comp148140_c0_seq1.mrna1;Target=comp148140_c0_seq1 603 153 .
Chr1	stalkie_big_nohaplotig	exon	163674910	163675042	89	-	.	Parent=comp148140_c0_seq1.mrna1;Target=comp148140_c0_seq1 152 25 .
Chr1	stalkie_big_nohaplotig	CDS	163674503	163674641	.	-	0	Parent=comp148140_c0_seq1.mrna1
Chr1	gffcl	locus	163675203	163677877	.	-	.	ID=RLOC_00013341;geneIDs=FBgn0027084.1.path1,comp134788_c0_seq1.path1;transcripts=FBgn0027084.1.mrna1,comp134788_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163675203	163677877	.	-	.	ID=FBgn0027084.1.mrna1;geneID=FBgn0027084.1.path1;Name=FBgn0027084.1;Dir=sensecoverage=100.0;identity=99.7;matches=1755;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013341
Chr1	stalkie_big_nohaplotig	exon	163675203	163675283	97	-	.	Parent=FBgn0027084.1.mrna1;Target=FBgn0027084.1 1681 1761 +
Chr1	stalkie_big_nohaplotig	exon	163675337	163676284	99	-	.	Parent=FBgn0027084.1.mrna1;Target=FBgn0027084.1 733 1680 +
Chr1	stalkie_big_nohaplotig	exon	163676341	163676481	100	-	.	Parent=FBgn0027084.1.mrna1;Target=FBgn0027084.1 592 732 +
Chr1	stalkie_big_nohaplotig	exon	163676606	163676831	100	-	.	Parent=FBgn0027084.1.mrna1;Target=FBgn0027084.1 366 591 +
Chr1	stalkie_big_nohaplotig	exon	163676909	163677220	99	-	.	Parent=FBgn0027084.1.mrna1;Target=FBgn0027084.1 54 365 +
Chr1	stalkie_big_nohaplotig	exon	163677825	163677877	100	-	.	Parent=FBgn0027084.1.mrna1;Target=FBgn0027084.1 1 53 +
Chr1	stalkie_big_nohaplotig	CDS	163675203	163675283	.	-	0	Parent=FBgn0027084.1.mrna1;Target=FBgn0027084.1 1681 1761 +
Chr1	stalkie_big_nohaplotig	CDS	163675337	163676284	.	-	0	Parent=FBgn0027084.1.mrna1;Target=FBgn0027084.1 733 1680 +
Chr1	stalkie_big_nohaplotig	CDS	163676341	163676481	.	-	0	Parent=FBgn0027084.1.mrna1;Target=FBgn0027084.1 592 732 +
Chr1	stalkie_big_nohaplotig	CDS	163676606	163676831	.	-	1	Parent=FBgn0027084.1.mrna1;Target=FBgn0027084.1 366 591 +
Chr1	stalkie_big_nohaplotig	CDS	163676909	163677220	.	-	1	Parent=FBgn0027084.1.mrna1;Target=FBgn0027084.1 54 365 +
Chr1	stalkie_big_nohaplotig	CDS	163677825	163677877	.	-	0	Parent=FBgn0027084.1.mrna1;Target=FBgn0027084.1 1 53 +
Chr1	stalkie_big_nohaplotig	mRNA	163677197	163677847	.	-	.	ID=comp134788_c0_seq1.mrna1;geneID=comp134788_c0_seq1.path1;Name=comp134788_c0_seq1;Dir=sensecoverage=100.0;identity=98.9;matches=555;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013341
Chr1	stalkie_big_nohaplotig	exon	163677197	163677220	100	-	.	Parent=comp134788_c0_seq1.mrna1;Target=comp134788_c0_seq1 538 561 +
Chr1	stalkie_big_nohaplotig	exon	163677311	163677847	98	-	.	Parent=comp134788_c0_seq1.mrna1;Target=comp134788_c0_seq1 1 537 +
Chr1	stalkie_big_nohaplotig	CDS	163677199	163677220	.	-	1	Parent=comp134788_c0_seq1.mrna1;Target=comp134788_c0_seq1 538 559 +
Chr1	stalkie_big_nohaplotig	CDS	163677311	163677456	.	-	0	Parent=comp134788_c0_seq1.mrna1;Target=comp134788_c0_seq1 392 537 +
Chr1	gffcl	locus	163700724	163701516	.	-	.	ID=RLOC_00013342;geneIDs=comp156250_c1_seq1.path1;transcripts=comp156250_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163700724	163701516	.	-	.	ID=comp156250_c1_seq1.mrna1;geneID=comp156250_c1_seq1.path1;Name=comp156250_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=769;mismatches=6;indels=7;unknowns=0;Target=comp156250_c1_seq1 387 130 .;locus=RLOC_00013342
Chr1	stalkie_big_nohaplotig	exon	163700724	163700792	100	-	.	Parent=comp156250_c1_seq1.mrna1;Target=comp156250_c1_seq1 854 786 .
Chr1	stalkie_big_nohaplotig	exon	163700804	163701516	98	-	.	Parent=comp156250_c1_seq1.mrna1;Target=comp156250_c1_seq1 706 1 .
Chr1	stalkie_big_nohaplotig	CDS	163701130	163701387	.	-	0	Parent=comp156250_c1_seq1.mrna1
Chr1	gffcl	locus	163703604	163707163	.	-	.	ID=RLOC_00013343;geneIDs=FBgn0052666.1.path1;transcripts=FBgn0052666.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163703604	163707163	.	-	.	ID=FBgn0052666.1.mrna1;geneID=FBgn0052666.1.path1;Name=FBgn0052666.1;Dir=sensecoverage=77.4;identity=99.2;matches=1863;mismatches=15;indels=0;unknowns=0;locus=RLOC_00013343
Chr1	stalkie_big_nohaplotig	exon	163703604	163704773	99	-	.	Parent=FBgn0052666.1.mrna1;Target=FBgn0052666.1 843 2012 +
Chr1	stalkie_big_nohaplotig	exon	163705150	163705468	97	-	.	Parent=FBgn0052666.1.mrna1;Target=FBgn0052666.1 524 842 +
Chr1	stalkie_big_nohaplotig	exon	163705529	163705704	99	-	.	Parent=FBgn0052666.1.mrna1;Target=FBgn0052666.1 348 523 +
Chr1	stalkie_big_nohaplotig	exon	163706951	163707163	99	-	.	Parent=FBgn0052666.1.mrna1;Target=FBgn0052666.1 135 347 +
Chr1	stalkie_big_nohaplotig	CDS	163703606	163704773	.	-	1	Parent=FBgn0052666.1.mrna1;Target=FBgn0052666.1 843 2010 +
Chr1	stalkie_big_nohaplotig	CDS	163705150	163705468	.	-	2	Parent=FBgn0052666.1.mrna1;Target=FBgn0052666.1 524 842 +
Chr1	stalkie_big_nohaplotig	CDS	163705529	163705704	.	-	1	Parent=FBgn0052666.1.mrna1;Target=FBgn0052666.1 348 523 +
Chr1	stalkie_big_nohaplotig	CDS	163706951	163707162	.	-	0	Parent=FBgn0052666.1.mrna1;Target=FBgn0052666.1 136 347 +
Chr1	gffcl	locus	163729222	164071401	.	-	.	ID=RLOC_00013344;geneIDs=FBgn0030089.1.path1,comp162103_c0_seq1.path1;transcripts=comp162103_c0_seq1.mrna1,FBgn0030089.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163729222	164071401	.	-	.	ID=comp162103_c0_seq1.mrna1;geneID=comp162103_c0_seq1.path1;Name=comp162103_c0_seq1;Dir=indeterminatecoverage=69.6;identity=93.6;matches=1399;mismatches=60;indels=35;unknowns=0;Target=comp162103_c0_seq1 947 846 .;locus=RLOC_00013344
Chr1	stalkie_big_nohaplotig	exon	163729222	163729229	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1614 1607 .
Chr1	stalkie_big_nohaplotig	exon	163736287	163736288	9	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1601 1580 .
Chr1	stalkie_big_nohaplotig	exon	163741552	163741562	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1488 1478 .
Chr1	stalkie_big_nohaplotig	exon	163743777	163743787	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1470 1460 .
Chr1	stalkie_big_nohaplotig	exon	163745038	163745039	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1459 1458 .
Chr1	stalkie_big_nohaplotig	exon	163749585	163749591	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1457 1451 .
Chr1	stalkie_big_nohaplotig	exon	163787127	163787132	83	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1450 1445 .
Chr1	stalkie_big_nohaplotig	exon	163790512	163790526	86	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1444 1432 .
Chr1	stalkie_big_nohaplotig	exon	163792406	163792418	84	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1431 1419 .
Chr1	stalkie_big_nohaplotig	exon	163795123	163795128	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1418 1413 .
Chr1	stalkie_big_nohaplotig	exon	163800331	163800334	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1412 1409 .
Chr1	stalkie_big_nohaplotig	exon	163816406	163816411	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1408 1403 .
Chr1	stalkie_big_nohaplotig	exon	163827905	163827906	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1402 1401 .
Chr1	stalkie_big_nohaplotig	exon	163829532	163829542	81	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1400 1390 .
Chr1	stalkie_big_nohaplotig	exon	163839646	163839649	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1389 1386 .
Chr1	stalkie_big_nohaplotig	exon	163842832	163842890	64	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1385 1322 .
Chr1	stalkie_big_nohaplotig	exon	163844188	163844196	66	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1321 1313 .
Chr1	stalkie_big_nohaplotig	exon	163848488	163848502	86	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1312 1298 .
Chr1	stalkie_big_nohaplotig	exon	163876128	163876134	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1297 1291 .
Chr1	stalkie_big_nohaplotig	exon	163877143	163877145	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1290 1288 .
Chr1	stalkie_big_nohaplotig	exon	163879598	163879599	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1287 1286 .
Chr1	stalkie_big_nohaplotig	exon	163903869	163903879	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1284 1274 .
Chr1	stalkie_big_nohaplotig	exon	163903896	163903903	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1252 1245 .
Chr1	stalkie_big_nohaplotig	exon	163912188	163912194	85	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1244 1238 .
Chr1	stalkie_big_nohaplotig	exon	163918692	163918699	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1237 1230 .
Chr1	stalkie_big_nohaplotig	exon	163926346	163926347	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1229 1228 .
Chr1	stalkie_big_nohaplotig	exon	163930126	163930134	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1227 1219 .
Chr1	stalkie_big_nohaplotig	exon	163937466	163937470	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1218 1214 .
Chr1	stalkie_big_nohaplotig	exon	163944890	163944901	91	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1213 1202 .
Chr1	stalkie_big_nohaplotig	exon	163947642	163947648	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1201 1195 .
Chr1	stalkie_big_nohaplotig	exon	163948546	163948553	75	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1194 1187 .
Chr1	stalkie_big_nohaplotig	exon	163952159	163952161	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1186 1184 .
Chr1	stalkie_big_nohaplotig	exon	163961304	163961314	81	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1183 1173 .
Chr1	stalkie_big_nohaplotig	exon	163978169	163978172	75	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1172 1169 .
Chr1	stalkie_big_nohaplotig	exon	163985047	163985056	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1168 1159 .
Chr1	stalkie_big_nohaplotig	exon	163986022	163986029	100	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1158 1151 .
Chr1	stalkie_big_nohaplotig	exon	164070258	164071401	97	-	.	Parent=comp162103_c0_seq1.mrna1;Target=comp162103_c0_seq1 1150 1 .
Chr1	stalkie_big_nohaplotig	CDS	164070460	164070561	.	-	0	Parent=comp162103_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163847055	163857737	.	-	.	ID=FBgn0030089.1.mrna1;geneID=FBgn0030089.1.path1;Name=FBgn0030089.1;Dir=sensecoverage=100.0;identity=99.6;matches=2764;mismatches=11;indels=0;unknowns=0;locus=RLOC_00013344
Chr1	stalkie_big_nohaplotig	exon	163847055	163847153	98	-	.	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 2677 2775 +
Chr1	stalkie_big_nohaplotig	exon	163847226	163847333	100	-	.	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 2569 2676 +
Chr1	stalkie_big_nohaplotig	exon	163848142	163848282	99	-	.	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 2428 2568 +
Chr1	stalkie_big_nohaplotig	exon	163848347	163848742	99	-	.	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 2032 2427 +
Chr1	stalkie_big_nohaplotig	exon	163848814	163849087	100	-	.	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 1758 2031 +
Chr1	stalkie_big_nohaplotig	exon	163849153	163849291	99	-	.	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 1619 1757 +
Chr1	stalkie_big_nohaplotig	exon	163849358	163849568	98	-	.	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 1408 1618 +
Chr1	stalkie_big_nohaplotig	exon	163849631	163850015	99	-	.	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 1023 1407 +
Chr1	stalkie_big_nohaplotig	exon	163850099	163850355	99	-	.	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 766 1022 +
Chr1	stalkie_big_nohaplotig	exon	163850860	163850877	100	-	.	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 748 765 +
Chr1	stalkie_big_nohaplotig	exon	163853139	163853215	100	-	.	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 671 747 +
Chr1	stalkie_big_nohaplotig	exon	163853333	163853571	99	-	.	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 432 670 +
Chr1	stalkie_big_nohaplotig	exon	163853690	163853878	100	-	.	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 243 431 +
Chr1	stalkie_big_nohaplotig	exon	163853953	163854094	100	-	.	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 101 242 +
Chr1	stalkie_big_nohaplotig	exon	163854423	163854484	100	-	.	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 39 100 +
Chr1	stalkie_big_nohaplotig	exon	163857700	163857737	100	-	.	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 1 38 +
Chr1	stalkie_big_nohaplotig	CDS	163847055	163847153	.	-	0	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 2677 2775 +
Chr1	stalkie_big_nohaplotig	CDS	163847226	163847333	.	-	0	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 2569 2676 +
Chr1	stalkie_big_nohaplotig	CDS	163848142	163848282	.	-	0	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 2428 2568 +
Chr1	stalkie_big_nohaplotig	CDS	163848347	163848742	.	-	0	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 2032 2427 +
Chr1	stalkie_big_nohaplotig	CDS	163848814	163849087	.	-	1	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 1758 2031 +
Chr1	stalkie_big_nohaplotig	CDS	163849153	163849291	.	-	2	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 1619 1757 +
Chr1	stalkie_big_nohaplotig	CDS	163849358	163849568	.	-	0	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 1408 1618 +
Chr1	stalkie_big_nohaplotig	CDS	163849631	163850015	.	-	1	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 1023 1407 +
Chr1	stalkie_big_nohaplotig	CDS	163850099	163850355	.	-	0	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 766 1022 +
Chr1	stalkie_big_nohaplotig	CDS	163850860	163850877	.	-	0	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 748 765 +
Chr1	stalkie_big_nohaplotig	CDS	163853139	163853215	.	-	2	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 671 747 +
Chr1	stalkie_big_nohaplotig	CDS	163853333	163853571	.	-	1	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 432 670 +
Chr1	stalkie_big_nohaplotig	CDS	163853690	163853878	.	-	1	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 243 431 +
Chr1	stalkie_big_nohaplotig	CDS	163853953	163854094	.	-	2	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 101 242 +
Chr1	stalkie_big_nohaplotig	CDS	163854423	163854484	.	-	1	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 39 100 +
Chr1	stalkie_big_nohaplotig	CDS	163857700	163857737	.	-	0	Parent=FBgn0030089.1.mrna1;Target=FBgn0030089.1 1 38 +
Chr1	gffcl	locus	163771722	163772106	.	+	.	ID=RLOC_00013345;geneIDs=comp144406_c0_seq1.path1;transcripts=comp144406_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163771722	163772106	.	+	.	ID=comp144406_c0_seq1.mrna1;geneID=comp144406_c0_seq1.path1;Name=comp144406_c0_seq1;Dir=indeterminatecoverage=96.7;identity=99.0;matches=382;mismatches=2;indels=2;unknowns=0;Target=comp144406_c0_seq1 398 14 .;CDS_Target=comp144406_c0_seq1 398 150 .;locus=RLOC_00013345
Chr1	stalkie_big_nohaplotig	exon	163771722	163772106	98	+	.	Parent=comp144406_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	163771859	163772106	.	+	0	Parent=comp144406_c0_seq1.mrna1
Chr1	gffcl	locus	163776408	163776844	.	+	.	ID=RLOC_00013346;geneIDs=comp137644_c0_seq1.path1;transcripts=comp137644_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163776408	163776844	.	+	.	ID=comp137644_c0_seq1.mrna1;geneID=comp137644_c0_seq1.path1;Name=comp137644_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.3;matches=434;mismatches=3;indels=0;unknowns=0;Target=comp137644_c0_seq1 438 2 .;CDS_Target=comp137644_c0_seq1 398 360 .;locus=RLOC_00013346
Chr1	stalkie_big_nohaplotig	exon	163776408	163776844	99	+	.	Parent=comp137644_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	163776766	163776804	.	+	0	Parent=comp137644_c0_seq1.mrna1
Chr1	gffcl	locus	163834955	163836045	.	-	.	ID=RLOC_00013347;geneIDs=FBgn0030502.1.path1;transcripts=FBgn0030502.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163834955	163836045	.	-	.	ID=FBgn0030502.1.mrna1;geneID=FBgn0030502.1.path1;Name=FBgn0030502.1;Dir=sensecoverage=100.0;identity=99.7;matches=1023;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013347
Chr1	stalkie_big_nohaplotig	exon	163834955	163835681	99	-	.	Parent=FBgn0030502.1.mrna1;Target=FBgn0030502.1 300 1026 +
Chr1	stalkie_big_nohaplotig	exon	163835747	163836045	100	-	.	Parent=FBgn0030502.1.mrna1;Target=FBgn0030502.1 1 299 +
Chr1	stalkie_big_nohaplotig	CDS	163834955	163835681	.	-	1	Parent=FBgn0030502.1.mrna1;Target=FBgn0030502.1 300 1026 +
Chr1	stalkie_big_nohaplotig	CDS	163835747	163836045	.	-	0	Parent=FBgn0030502.1.mrna1;Target=FBgn0030502.1 1 299 +
Chr1	gffcl	locus	163855389	163856894	.	-	.	ID=RLOC_00013348;geneIDs=comp163412_c1_seq1.path1;transcripts=comp163412_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163855389	163856894	.	-	.	ID=comp163412_c1_seq1.mrna1;geneID=comp163412_c1_seq1.path1;Name=comp163412_c1_seq1;Dir=indeterminatecoverage=100.0;identity=95.4;matches=1442;mismatches=49;indels=21;unknowns=0;Target=comp163412_c1_seq1 1497 1 .;CDS_Target=comp163412_c1_seq1 793 638 .;locus=RLOC_00013348
Chr1	stalkie_big_nohaplotig	exon	163855389	163856894	95	-	.	Parent=comp163412_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	163856088	163856243	.	-	0	Parent=comp163412_c1_seq1.mrna1
Chr1	gffcl	locus	163863711	163865791	.	-	.	ID=RLOC_00013349;geneIDs=FBgn0030088.1.path1;transcripts=FBgn0030088.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163863711	163865791	.	-	.	ID=FBgn0030088.1.mrna1;geneID=FBgn0030088.1.path1;Name=FBgn0030088.1;Dir=sensecoverage=100.0;identity=99.1;matches=559;mismatches=4;indels=1;unknowns=0;locus=RLOC_00013349
Chr1	stalkie_big_nohaplotig	exon	163863711	163863792	98	-	.	Parent=FBgn0030088.1.mrna1;Target=FBgn0030088.1 483 564 +
Chr1	stalkie_big_nohaplotig	exon	163863865	163864036	99	-	.	Parent=FBgn0030088.1.mrna1;Target=FBgn0030088.1 311 482 +
Chr1	stalkie_big_nohaplotig	exon	163865423	163865675	98	-	.	Parent=FBgn0030088.1.mrna1;Target=FBgn0030088.1 57 310 +
Chr1	stalkie_big_nohaplotig	exon	163865736	163865791	100	-	.	Parent=FBgn0030088.1.mrna1;Target=FBgn0030088.1 1 56 +
Chr1	stalkie_big_nohaplotig	CDS	163865590	163865675	.	-	0	Parent=FBgn0030088.1.mrna1;Target=FBgn0030088.1 57 143 +
Chr1	stalkie_big_nohaplotig	CDS	163865736	163865789	.	-	0	Parent=FBgn0030088.1.mrna1;Target=FBgn0030088.1 3 56 +
Chr1	gffcl	locus	163867878	163868333	.	+	.	ID=RLOC_00013350;geneIDs=comp154060_c0_seq1.path1;transcripts=comp154060_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163867878	163868333	.	+	.	ID=comp154060_c0_seq1.mrna1;geneID=comp154060_c0_seq1.path1;Name=comp154060_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=442;mismatches=2;indels=12;unknowns=0;Target=comp154060_c0_seq1 444 1 .;CDS_Target=comp154060_c0_seq1 371 339 .;locus=RLOC_00013350
Chr1	stalkie_big_nohaplotig	exon	163867878	163868333	96	+	.	Parent=comp154060_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	163868223	163868255	.	+	0	Parent=comp154060_c0_seq1.mrna1
Chr1	gffcl	locus	163868858	163870912	.	-	.	ID=RLOC_00013351;geneIDs=FBgn0030791.1.path1;transcripts=FBgn0030791.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163868858	163870912	.	-	.	ID=FBgn0030791.1.mrna1;geneID=FBgn0030791.1.path1;Name=FBgn0030791.1;Dir=sensecoverage=100.0;identity=99.7;matches=766;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013351
Chr1	stalkie_big_nohaplotig	exon	163868858	163868924	100	-	.	Parent=FBgn0030791.1.mrna1;Target=FBgn0030791.1 702 768 +
Chr1	stalkie_big_nohaplotig	exon	163869565	163869761	100	-	.	Parent=FBgn0030791.1.mrna1;Target=FBgn0030791.1 505 701 +
Chr1	stalkie_big_nohaplotig	exon	163869815	163870005	100	-	.	Parent=FBgn0030791.1.mrna1;Target=FBgn0030791.1 314 504 +
Chr1	stalkie_big_nohaplotig	exon	163870065	163870270	99	-	.	Parent=FBgn0030791.1.mrna1;Target=FBgn0030791.1 108 313 +
Chr1	stalkie_big_nohaplotig	exon	163870806	163870912	99	-	.	Parent=FBgn0030791.1.mrna1;Target=FBgn0030791.1 1 107 +
Chr1	stalkie_big_nohaplotig	CDS	163868858	163868924	.	-	1	Parent=FBgn0030791.1.mrna1;Target=FBgn0030791.1 702 768 +
Chr1	stalkie_big_nohaplotig	CDS	163869565	163869761	.	-	0	Parent=FBgn0030791.1.mrna1;Target=FBgn0030791.1 505 701 +
Chr1	stalkie_big_nohaplotig	CDS	163869815	163870005	.	-	2	Parent=FBgn0030791.1.mrna1;Target=FBgn0030791.1 314 504 +
Chr1	stalkie_big_nohaplotig	CDS	163870065	163870270	.	-	1	Parent=FBgn0030791.1.mrna1;Target=FBgn0030791.1 108 313 +
Chr1	stalkie_big_nohaplotig	CDS	163870806	163870912	.	-	0	Parent=FBgn0030791.1.mrna1;Target=FBgn0030791.1 1 107 +
Chr1	gffcl	locus	163871369	163872641	.	+	.	ID=RLOC_00013352;geneIDs=FBgn0030787.1.path1;transcripts=FBgn0030787.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163871369	163872641	.	+	.	ID=FBgn0030787.1.mrna1;geneID=FBgn0030787.1.path1;Name=FBgn0030787.1;Dir=sensecoverage=100.0;identity=98.0;matches=1133;mismatches=9;indels=14;unknowns=0;locus=RLOC_00013352
Chr1	stalkie_big_nohaplotig	exon	163871369	163871566	100	+	.	Parent=FBgn0030787.1.mrna1;Target=FBgn0030787.1 1 198 +
Chr1	stalkie_big_nohaplotig	exon	163871631	163871926	98	+	.	Parent=FBgn0030787.1.mrna1;Target=FBgn0030787.1 199 494 +
Chr1	stalkie_big_nohaplotig	exon	163871987	163872641	96	+	.	Parent=FBgn0030787.1.mrna1;Target=FBgn0030787.1 495 1149 +
Chr1	stalkie_big_nohaplotig	CDS	163871369	163871566	.	+	0	Parent=FBgn0030787.1.mrna1;Target=FBgn0030787.1 1 198 +
Chr1	stalkie_big_nohaplotig	CDS	163871631	163871926	.	+	0	Parent=FBgn0030787.1.mrna1;Target=FBgn0030787.1 199 494 +
Chr1	stalkie_big_nohaplotig	CDS	163871987	163872641	.	+	1	Parent=FBgn0030787.1.mrna1;Target=FBgn0030787.1 495 1149 +
Chr1	gffcl	locus	163873013	163873800	.	-	.	ID=RLOC_00013353;geneIDs=FBgn0030786.1.path1;transcripts=FBgn0030786.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163873013	163873800	.	-	.	ID=FBgn0030786.1.mrna1;geneID=FBgn0030786.1.path1;Name=FBgn0030786.1;Dir=sensecoverage=100.0;identity=98.8;matches=658;mismatches=8;indels=0;unknowns=0;locus=RLOC_00013353
Chr1	stalkie_big_nohaplotig	exon	163873013	163873227	99	-	.	Parent=FBgn0030786.1.mrna1;Target=FBgn0030786.1 452 666 +
Chr1	stalkie_big_nohaplotig	exon	163873294	163873507	99	-	.	Parent=FBgn0030786.1.mrna1;Target=FBgn0030786.1 238 451 +
Chr1	stalkie_big_nohaplotig	exon	163873564	163873800	97	-	.	Parent=FBgn0030786.1.mrna1;Target=FBgn0030786.1 1 237 +
Chr1	stalkie_big_nohaplotig	CDS	163873013	163873227	.	-	2	Parent=FBgn0030786.1.mrna1;Target=FBgn0030786.1 452 666 +
Chr1	stalkie_big_nohaplotig	CDS	163873294	163873507	.	-	0	Parent=FBgn0030786.1.mrna1;Target=FBgn0030786.1 238 451 +
Chr1	stalkie_big_nohaplotig	CDS	163873564	163873800	.	-	0	Parent=FBgn0030786.1.mrna1;Target=FBgn0030786.1 1 237 +
Chr1	gffcl	locus	163875782	163879394	.	+	.	ID=RLOC_00013354;geneIDs=FBgn0030997.1.path1;transcripts=FBgn0030997.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163875782	163879394	.	+	.	ID=FBgn0030997.1.mrna1;geneID=FBgn0030997.1.path1;Name=FBgn0030997.1;Dir=sensecoverage=100.0;identity=99.5;matches=1152;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013354
Chr1	stalkie_big_nohaplotig	exon	163875782	163876042	100	+	.	Parent=FBgn0030997.1.mrna1;Target=FBgn0030997.1 1 261 +
Chr1	stalkie_big_nohaplotig	exon	163878265	163878507	98	+	.	Parent=FBgn0030997.1.mrna1;Target=FBgn0030997.1 262 504 +
Chr1	stalkie_big_nohaplotig	exon	163878583	163878856	99	+	.	Parent=FBgn0030997.1.mrna1;Target=FBgn0030997.1 505 778 +
Chr1	stalkie_big_nohaplotig	exon	163878940	163879161	99	+	.	Parent=FBgn0030997.1.mrna1;Target=FBgn0030997.1 779 1000 +
Chr1	stalkie_big_nohaplotig	exon	163879237	163879394	99	+	.	Parent=FBgn0030997.1.mrna1;Target=FBgn0030997.1 1001 1158 +
Chr1	stalkie_big_nohaplotig	CDS	163875782	163876042	.	+	0	Parent=FBgn0030997.1.mrna1;Target=FBgn0030997.1 1 261 +
Chr1	stalkie_big_nohaplotig	CDS	163878265	163878507	.	+	0	Parent=FBgn0030997.1.mrna1;Target=FBgn0030997.1 262 504 +
Chr1	stalkie_big_nohaplotig	CDS	163878583	163878856	.	+	0	Parent=FBgn0030997.1.mrna1;Target=FBgn0030997.1 505 778 +
Chr1	stalkie_big_nohaplotig	CDS	163878940	163879161	.	+	2	Parent=FBgn0030997.1.mrna1;Target=FBgn0030997.1 779 1000 +
Chr1	stalkie_big_nohaplotig	CDS	163879237	163879394	.	+	2	Parent=FBgn0030997.1.mrna1;Target=FBgn0030997.1 1001 1158 +
Chr1	gffcl	locus	163880244	163882170	.	-	.	ID=RLOC_00013355;geneIDs=comp163444_c2_seq1.path1;transcripts=comp163444_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163880244	163882170	.	-	.	ID=comp163444_c2_seq1.mrna1;geneID=comp163444_c2_seq1.path1;Name=comp163444_c2_seq1;Dir=indeterminatecoverage=99.9;identity=94.4;matches=1315;mismatches=38;indels=40;unknowns=0;Target=comp163444_c2_seq1 645 529 .;locus=RLOC_00013355
Chr1	stalkie_big_nohaplotig	exon	163880244	163881498	94	-	.	Parent=comp163444_c2_seq1.mrna1;Target=comp163444_c2_seq1 1379 117 .
Chr1	stalkie_big_nohaplotig	exon	163882059	163882170	87	-	.	Parent=comp163444_c2_seq1.mrna1;Target=comp163444_c2_seq1 116 1 .
Chr1	stalkie_big_nohaplotig	CDS	163880958	163881076	.	-	0	Parent=comp163444_c2_seq1.mrna1
Chr1	gffcl	locus	163882657	163883073	.	-	.	ID=RLOC_00013356;geneIDs=comp156521_c0_seq1.path1;transcripts=comp156521_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163882657	163883073	.	-	.	ID=comp156521_c0_seq1.mrna1;geneID=comp156521_c0_seq1.path1;Name=comp156521_c0_seq1;Dir=indeterminatecoverage=99.0;identity=98.3;matches=410;mismatches=7;indels=0;unknowns=0;Target=comp156521_c0_seq1 417 1 .;CDS_Target=comp156521_c0_seq1 330 193 .;locus=RLOC_00013356
Chr1	stalkie_big_nohaplotig	exon	163882657	163883073	98	-	.	Parent=comp156521_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	163882744	163882881	.	-	0	Parent=comp156521_c0_seq1.mrna1
Chr1	gffcl	locus	163887422	163888513	.	+	.	ID=RLOC_00013357;geneIDs=comp81378_c0_seq1.path1;transcripts=comp81378_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163887422	163888513	.	+	.	ID=comp81378_c0_seq1.mrna1;geneID=comp81378_c0_seq1.path1;Name=comp81378_c0_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=647;mismatches=3;indels=1;unknowns=0;Target=comp81378_c0_seq1 61 177 +;locus=RLOC_00013357
Chr1	stalkie_big_nohaplotig	exon	163887422	163887785	99	+	.	Parent=comp81378_c0_seq1.mrna1;Target=comp81378_c0_seq1 1 364 +
Chr1	stalkie_big_nohaplotig	exon	163888228	163888513	99	+	.	Parent=comp81378_c0_seq1.mrna1;Target=comp81378_c0_seq1 365 651 +
Chr1	stalkie_big_nohaplotig	CDS	163887482	163887598	.	+	0	Parent=comp81378_c0_seq1.mrna1
Chr1	gffcl	locus	163888776	163889104	.	-	.	ID=RLOC_00013358;geneIDs=comp135988_c0_seq1.path1;transcripts=comp135988_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163888776	163889104	.	-	.	ID=comp135988_c0_seq1.mrna1;geneID=comp135988_c0_seq1.path1;Name=comp135988_c0_seq1;Dir=indeterminatecoverage=93.7;identity=99.4;matches=327;mismatches=2;indels=0;unknowns=0;Target=comp135988_c0_seq1 351 23 .;CDS_Target=comp135988_c0_seq1 215 24 .;locus=RLOC_00013358
Chr1	stalkie_big_nohaplotig	exon	163888776	163889104	99	-	.	Parent=comp135988_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	163888912	163889103	.	-	0	Parent=comp135988_c0_seq1.mrna1
Chr1	gffcl	locus	163908678	163910763	.	-	.	ID=RLOC_00013359;geneIDs=comp159396_c0_seq1.path1;transcripts=comp159396_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163908678	163910763	.	-	.	ID=comp159396_c0_seq1.mrna1;geneID=comp159396_c0_seq1.path1;Name=comp159396_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=2075;mismatches=11;indels=3;unknowns=0;Target=comp159396_c0_seq1 2089 1 .;CDS_Target=comp159396_c0_seq1 1478 1383 .;locus=RLOC_00013359
Chr1	stalkie_big_nohaplotig	exon	163908678	163910763	99	-	.	Parent=comp159396_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	163909289	163909384	.	-	0	Parent=comp159396_c0_seq1.mrna1
Chr1	gffcl	locus	163993960	164066676	.	+	.	ID=RLOC_00013360;geneIDs=FBgn0003345.1.path1,comp134779_c0_seq1.path1;transcripts=FBgn0003345.1.mrna1,comp134779_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	163993960	164066676	.	+	.	ID=FBgn0003345.1.mrna1;geneID=FBgn0003345.1.path1;Name=FBgn0003345.1;Dir=sensecoverage=100.0;identity=100.0;matches=1335;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013360
Chr1	stalkie_big_nohaplotig	exon	163993960	163994071	100	+	.	Parent=FBgn0003345.1.mrna1;Target=FBgn0003345.1 1 112 +
Chr1	stalkie_big_nohaplotig	exon	164036057	164036196	100	+	.	Parent=FBgn0003345.1.mrna1;Target=FBgn0003345.1 113 252 +
Chr1	stalkie_big_nohaplotig	exon	164037323	164037461	100	+	.	Parent=FBgn0003345.1.mrna1;Target=FBgn0003345.1 253 391 +
Chr1	stalkie_big_nohaplotig	exon	164059097	164059227	100	+	.	Parent=FBgn0003345.1.mrna1;Target=FBgn0003345.1 392 522 +
Chr1	stalkie_big_nohaplotig	exon	164065551	164065591	100	+	.	Parent=FBgn0003345.1.mrna1;Target=FBgn0003345.1 523 563 +
Chr1	stalkie_big_nohaplotig	exon	164065645	164065837	100	+	.	Parent=FBgn0003345.1.mrna1;Target=FBgn0003345.1 564 756 +
Chr1	stalkie_big_nohaplotig	exon	164065896	164065958	100	+	.	Parent=FBgn0003345.1.mrna1;Target=FBgn0003345.1 757 819 +
Chr1	stalkie_big_nohaplotig	exon	164066031	164066200	100	+	.	Parent=FBgn0003345.1.mrna1;Target=FBgn0003345.1 820 989 +
Chr1	stalkie_big_nohaplotig	exon	164066260	164066494	100	+	.	Parent=FBgn0003345.1.mrna1;Target=FBgn0003345.1 990 1224 +
Chr1	stalkie_big_nohaplotig	exon	164066566	164066676	100	+	.	Parent=FBgn0003345.1.mrna1;Target=FBgn0003345.1 1225 1335 +
Chr1	stalkie_big_nohaplotig	CDS	163993960	163994071	.	+	0	Parent=FBgn0003345.1.mrna1;Target=FBgn0003345.1 1 112 +
Chr1	stalkie_big_nohaplotig	CDS	164036057	164036196	.	+	2	Parent=FBgn0003345.1.mrna1;Target=FBgn0003345.1 113 252 +
Chr1	stalkie_big_nohaplotig	CDS	164037323	164037461	.	+	0	Parent=FBgn0003345.1.mrna1;Target=FBgn0003345.1 253 391 +
Chr1	stalkie_big_nohaplotig	CDS	164059097	164059227	.	+	2	Parent=FBgn0003345.1.mrna1;Target=FBgn0003345.1 392 522 +
Chr1	stalkie_big_nohaplotig	CDS	164065551	164065591	.	+	0	Parent=FBgn0003345.1.mrna1;Target=FBgn0003345.1 523 563 +
Chr1	stalkie_big_nohaplotig	CDS	164065645	164065837	.	+	1	Parent=FBgn0003345.1.mrna1;Target=FBgn0003345.1 564 756 +
Chr1	stalkie_big_nohaplotig	CDS	164065896	164065958	.	+	0	Parent=FBgn0003345.1.mrna1;Target=FBgn0003345.1 757 819 +
Chr1	stalkie_big_nohaplotig	CDS	164066031	164066200	.	+	0	Parent=FBgn0003345.1.mrna1;Target=FBgn0003345.1 820 989 +
Chr1	stalkie_big_nohaplotig	CDS	164066260	164066494	.	+	1	Parent=FBgn0003345.1.mrna1;Target=FBgn0003345.1 990 1224 +
Chr1	stalkie_big_nohaplotig	CDS	164066566	164066676	.	+	0	Parent=FBgn0003345.1.mrna1;Target=FBgn0003345.1 1225 1335 +
Chr1	stalkie_big_nohaplotig	mRNA	164059204	164064456	.	+	.	ID=comp134779_c0_seq1.mrna1;geneID=comp134779_c0_seq1.path1;Name=comp134779_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=483;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013360
Chr1	stalkie_big_nohaplotig	exon	164059204	164059227	100	+	.	Parent=comp134779_c0_seq1.mrna1;Target=comp134779_c0_seq1 1 24 +
Chr1	stalkie_big_nohaplotig	exon	164063998	164064456	100	+	.	Parent=comp134779_c0_seq1.mrna1;Target=comp134779_c0_seq1 25 483 +
Chr1	stalkie_big_nohaplotig	CDS	164059204	164059227	.	+	0	Parent=comp134779_c0_seq1.mrna1;Target=comp134779_c0_seq1 1 24 +
Chr1	stalkie_big_nohaplotig	CDS	164063998	164064423	.	+	0	Parent=comp134779_c0_seq1.mrna1;Target=comp134779_c0_seq1 25 450 +
Chr1	gffcl	locus	164052708	164053533	.	-	.	ID=RLOC_00013361;geneIDs=comp153873_c0_seq1.path1;transcripts=comp153873_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164052708	164053533	.	-	.	ID=comp153873_c0_seq1.mrna1;geneID=comp153873_c0_seq1.path1;Name=comp153873_c0_seq1;Dir=antisensecoverage=100.0;identity=98.3;matches=698;mismatches=11;indels=1;unknowns=0;locus=RLOC_00013361
Chr1	stalkie_big_nohaplotig	exon	164052708	164052971	98	-	.	Parent=comp153873_c0_seq1.mrna1;Target=comp153873_c0_seq1 1 264 -
Chr1	stalkie_big_nohaplotig	exon	164053028	164053137	100	-	.	Parent=comp153873_c0_seq1.mrna1;Target=comp153873_c0_seq1 265 374 -
Chr1	stalkie_big_nohaplotig	exon	164053198	164053533	97	-	.	Parent=comp153873_c0_seq1.mrna1;Target=comp153873_c0_seq1 375 709 -
Chr1	stalkie_big_nohaplotig	CDS	164052899	164052971	.	-	1	Parent=comp153873_c0_seq1.mrna1;Target=comp153873_c0_seq1 192 264 .
Chr1	stalkie_big_nohaplotig	CDS	164053028	164053137	.	-	0	Parent=comp153873_c0_seq1.mrna1;Target=comp153873_c0_seq1 265 374 .
Chr1	stalkie_big_nohaplotig	CDS	164053198	164053323	.	-	0	Parent=comp153873_c0_seq1.mrna1;Target=comp153873_c0_seq1 375 500 .
Chr1	gffcl	locus	164067433	164068998	.	+	.	ID=RLOC_00013362;geneIDs=comp158007_c0_seq1.path1;transcripts=comp158007_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164067433	164068998	.	+	.	ID=comp158007_c0_seq1.mrna1;geneID=comp158007_c0_seq1.path1;Name=comp158007_c0_seq1;Dir=indeterminatecoverage=100.0;identity=89.5;matches=1433;mismatches=42;indels=127;unknowns=0;Target=comp158007_c0_seq1 1511 1 .;CDS_Target=comp158007_c0_seq1 324 1 .;locus=RLOC_00013362
Chr1	stalkie_big_nohaplotig	exon	164067433	164068998	89	+	.	Parent=comp158007_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164067433	164067756	.	+	0	Parent=comp158007_c0_seq1.mrna1
Chr1	gffcl	locus	164073145	164074298	.	+	.	ID=RLOC_00013363;geneIDs=comp155336_c0_seq1.path1;transcripts=comp155336_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164073145	164074298	.	+	.	ID=comp155336_c0_seq1.mrna1;geneID=comp155336_c0_seq1.path1;Name=comp155336_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1150;mismatches=4;indels=4;unknowns=0;Target=comp155336_c0_seq1 1158 1 .;CDS_Target=comp155336_c0_seq1 280 113 .;locus=RLOC_00013363
Chr1	stalkie_big_nohaplotig	exon	164073145	164074298	99	+	.	Parent=comp155336_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164073257	164073424	.	+	0	Parent=comp155336_c0_seq1.mrna1
Chr1	gffcl	locus	164075074	164075874	.	-	.	ID=RLOC_00013364;geneIDs=comp156104_c0_seq1.path1;transcripts=comp156104_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164075074	164075874	.	-	.	ID=comp156104_c0_seq1.mrna1;geneID=comp156104_c0_seq1.path1;Name=comp156104_c0_seq1;Dir=indeterminatecoverage=90.0;identity=98.6;matches=790;mismatches=10;indels=1;unknowns=0;Target=comp156104_c0_seq1 800 1 .;CDS_Target=comp156104_c0_seq1 81 1 .;locus=RLOC_00013364
Chr1	stalkie_big_nohaplotig	exon	164075074	164075874	98	-	.	Parent=comp156104_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164075794	164075874	.	-	0	Parent=comp156104_c0_seq1.mrna1
Chr1	gffcl	locus	164076093	164083062	.	-	.	ID=RLOC_00013365;geneIDs=FBgn0015286.1.path1;transcripts=FBgn0015286.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164076093	164083062	.	-	.	ID=FBgn0015286.1.mrna1;geneID=FBgn0015286.1.path1;Name=FBgn0015286.1;Dir=sensecoverage=100.0;identity=99.7;matches=613;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013365
Chr1	stalkie_big_nohaplotig	exon	164076093	164076206	99	-	.	Parent=FBgn0015286.1.mrna1;Target=FBgn0015286.1 502 615 +
Chr1	stalkie_big_nohaplotig	exon	164078954	164079128	100	-	.	Parent=FBgn0015286.1.mrna1;Target=FBgn0015286.1 327 501 +
Chr1	stalkie_big_nohaplotig	exon	164082679	164082839	100	-	.	Parent=FBgn0015286.1.mrna1;Target=FBgn0015286.1 166 326 +
Chr1	stalkie_big_nohaplotig	exon	164082898	164083062	99	-	.	Parent=FBgn0015286.1.mrna1;Target=FBgn0015286.1 1 165 +
Chr1	stalkie_big_nohaplotig	CDS	164076093	164076206	.	-	0	Parent=FBgn0015286.1.mrna1;Target=FBgn0015286.1 502 615 +
Chr1	stalkie_big_nohaplotig	CDS	164078954	164079128	.	-	1	Parent=FBgn0015286.1.mrna1;Target=FBgn0015286.1 327 501 +
Chr1	stalkie_big_nohaplotig	CDS	164082679	164082839	.	-	0	Parent=FBgn0015286.1.mrna1;Target=FBgn0015286.1 166 326 +
Chr1	stalkie_big_nohaplotig	CDS	164082898	164083062	.	-	0	Parent=FBgn0015286.1.mrna1;Target=FBgn0015286.1 1 165 +
Chr1	gffcl	locus	164101892	164102796	.	-	.	ID=RLOC_00013366;geneIDs=comp151488_c0_seq1.path1;transcripts=comp151488_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164101892	164102796	.	-	.	ID=comp151488_c0_seq1.mrna1;geneID=comp151488_c0_seq1.path1;Name=comp151488_c0_seq1;Dir=indeterminatecoverage=97.3;identity=99.6;matches=902;mismatches=3;indels=1;unknowns=0;Target=comp151488_c0_seq1 907 2 .;CDS_Target=comp151488_c0_seq1 760 722 .;locus=RLOC_00013366
Chr1	stalkie_big_nohaplotig	exon	164101892	164102796	99	-	.	Parent=comp151488_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164102039	164102076	.	-	0	Parent=comp151488_c0_seq1.mrna1
Chr1	gffcl	locus	164104147	164105022	.	-	.	ID=RLOC_00013367;geneIDs=FBgn0030352.1.path1;transcripts=FBgn0030352.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164104147	164105022	.	-	.	ID=FBgn0030352.1.mrna1;geneID=FBgn0030352.1.path1;Name=FBgn0030352.1;Dir=sensecoverage=100.0;identity=99.3;matches=694;mismatches=5;indels=0;unknowns=0;locus=RLOC_00013367
Chr1	stalkie_big_nohaplotig	exon	164104147	164104225	100	-	.	Parent=FBgn0030352.1.mrna1;Target=FBgn0030352.1 621 699 +
Chr1	stalkie_big_nohaplotig	exon	164104290	164104393	100	-	.	Parent=FBgn0030352.1.mrna1;Target=FBgn0030352.1 517 620 +
Chr1	stalkie_big_nohaplotig	exon	164104452	164104847	98	-	.	Parent=FBgn0030352.1.mrna1;Target=FBgn0030352.1 121 516 +
Chr1	stalkie_big_nohaplotig	exon	164104903	164105022	99	-	.	Parent=FBgn0030352.1.mrna1;Target=FBgn0030352.1 1 120 +
Chr1	stalkie_big_nohaplotig	CDS	164104147	164104225	.	-	1	Parent=FBgn0030352.1.mrna1;Target=FBgn0030352.1 621 699 +
Chr1	stalkie_big_nohaplotig	CDS	164104290	164104393	.	-	0	Parent=FBgn0030352.1.mrna1;Target=FBgn0030352.1 517 620 +
Chr1	stalkie_big_nohaplotig	CDS	164104452	164104847	.	-	0	Parent=FBgn0030352.1.mrna1;Target=FBgn0030352.1 121 516 +
Chr1	stalkie_big_nohaplotig	CDS	164104903	164105022	.	-	0	Parent=FBgn0030352.1.mrna1;Target=FBgn0030352.1 1 120 +
Chr1	gffcl	locus	164107036	164112557	.	-	.	ID=RLOC_00013368;geneIDs=FBgn0030558.1.path1;transcripts=FBgn0030558.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164107036	164112557	.	-	.	ID=FBgn0030558.1.mrna1;geneID=FBgn0030558.1.path1;Name=FBgn0030558.1;Dir=sensecoverage=100.0;identity=99.5;matches=1391;mismatches=7;indels=0;unknowns=0;locus=RLOC_00013368
Chr1	stalkie_big_nohaplotig	exon	164107036	164107371	99	-	.	Parent=FBgn0030558.1.mrna1;Target=FBgn0030558.1 1063 1398 +
Chr1	stalkie_big_nohaplotig	exon	164107427	164107720	99	-	.	Parent=FBgn0030558.1.mrna1;Target=FBgn0030558.1 769 1062 +
Chr1	stalkie_big_nohaplotig	exon	164107786	164108297	99	-	.	Parent=FBgn0030558.1.mrna1;Target=FBgn0030558.1 257 768 +
Chr1	stalkie_big_nohaplotig	exon	164112302	164112557	100	-	.	Parent=FBgn0030558.1.mrna1;Target=FBgn0030558.1 1 256 +
Chr1	stalkie_big_nohaplotig	CDS	164107036	164107371	.	-	0	Parent=FBgn0030558.1.mrna1;Target=FBgn0030558.1 1063 1398 +
Chr1	stalkie_big_nohaplotig	CDS	164107427	164107720	.	-	0	Parent=FBgn0030558.1.mrna1;Target=FBgn0030558.1 769 1062 +
Chr1	stalkie_big_nohaplotig	CDS	164107786	164108297	.	-	2	Parent=FBgn0030558.1.mrna1;Target=FBgn0030558.1 257 768 +
Chr1	stalkie_big_nohaplotig	CDS	164112302	164112557	.	-	0	Parent=FBgn0030558.1.mrna1;Target=FBgn0030558.1 1 256 +
Chr1	gffcl	locus	164117462	164133036	.	-	.	ID=RLOC_00013369;geneIDs=FBgn0002873.1.path1,comp148266_c0_seq1.path1,comp163467_c2_seq1.path1;transcripts=FBgn0002873.1.mrna1,comp148266_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164117462	164132595	.	-	.	ID=FBgn0002873.1.mrna1;geneID=FBgn0002873.1.path1;Name=FBgn0002873.1;Dir=sensecoverage=100.0;identity=99.4;matches=7156;mismatches=43;indels=0;unknowns=1;locus=RLOC_00013369
Chr1	stalkie_big_nohaplotig	exon	164117462	164117506	100	-	.	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 7156 7200 +
Chr1	stalkie_big_nohaplotig	exon	164121144	164121422	99	-	.	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 6877 7155 +
Chr1	stalkie_big_nohaplotig	exon	164122031	164122130	100	-	.	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 6777 6876 +
Chr1	stalkie_big_nohaplotig	exon	164122479	164122786	100	-	.	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 6469 6776 +
Chr1	stalkie_big_nohaplotig	exon	164122847	164122942	100	-	.	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 6373 6468 +
Chr1	stalkie_big_nohaplotig	exon	164124916	164130168	99	-	.	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 1120 6372 +
Chr1	stalkie_big_nohaplotig	exon	164130634	164130723	100	-	.	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 1030 1119 +
Chr1	stalkie_big_nohaplotig	exon	164130794	164130910	98	-	.	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 913 1029 +
Chr1	stalkie_big_nohaplotig	exon	164131390	164131490	100	-	.	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 812 912 +
Chr1	stalkie_big_nohaplotig	exon	164131558	164131639	100	-	.	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 730 811 +
Chr1	stalkie_big_nohaplotig	exon	164131695	164132131	100	-	.	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 293 729 +
Chr1	stalkie_big_nohaplotig	exon	164132210	164132348	100	-	.	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 154 292 +
Chr1	stalkie_big_nohaplotig	exon	164132443	164132595	99	-	.	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 1 153 +
Chr1	stalkie_big_nohaplotig	CDS	164117462	164117506	.	-	0	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 7156 7200 +
Chr1	stalkie_big_nohaplotig	CDS	164121144	164121422	.	-	0	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 6877 7155 +
Chr1	stalkie_big_nohaplotig	CDS	164122031	164122130	.	-	1	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 6777 6876 +
Chr1	stalkie_big_nohaplotig	CDS	164122479	164122786	.	-	0	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 6469 6776 +
Chr1	stalkie_big_nohaplotig	CDS	164122847	164122942	.	-	0	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 6373 6468 +
Chr1	stalkie_big_nohaplotig	CDS	164124916	164130168	.	-	0	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 1120 6372 +
Chr1	stalkie_big_nohaplotig	CDS	164130634	164130723	.	-	0	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 1030 1119 +
Chr1	stalkie_big_nohaplotig	CDS	164130794	164130910	.	-	0	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 913 1029 +
Chr1	stalkie_big_nohaplotig	CDS	164131390	164131490	.	-	2	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 812 912 +
Chr1	stalkie_big_nohaplotig	CDS	164131558	164131639	.	-	0	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 730 811 +
Chr1	stalkie_big_nohaplotig	CDS	164131695	164132131	.	-	2	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 293 729 +
Chr1	stalkie_big_nohaplotig	CDS	164132210	164132348	.	-	0	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 154 292 +
Chr1	stalkie_big_nohaplotig	CDS	164132443	164132595	.	-	0	Parent=FBgn0002873.1.mrna1;Target=FBgn0002873.1 1 153 +
Chr1	stalkie_big_nohaplotig	mRNA	164121802	164122053	.	-	.	ID=comp148266_c0_seq1.mrna1;geneID=comp148266_c0_seq1.path1;Name=comp148266_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.2;matches=240;mismatches=8;indels=4;unknowns=0;Target=comp148266_c0_seq1 248 1 .;CDS_Target=comp148266_c0_seq1 171 166 .;locus=RLOC_00013369
Chr1	stalkie_big_nohaplotig	exon	164121802	164122053	95	-	.	Parent=comp148266_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164121879	164121884	.	-	0	Parent=comp148266_c0_seq1.mrna1
Chr1	gffcl	locus	164133853	164136607	.	+	.	ID=RLOC_00013370;geneIDs=FBgn0031189.1.path1,comp157711_c1_seq1.path1;transcripts=comp157711_c1_seq1.mrna1,FBgn0031189.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164133853	164136607	.	+	.	ID=comp157711_c1_seq1.mrna1;geneID=comp157711_c1_seq1.path1;Name=comp157711_c1_seq1;Dir=antisensecoverage=97.5;identity=97.6;matches=2521;mismatches=27;indels=35;unknowns=0;locus=RLOC_00013370
Chr1	stalkie_big_nohaplotig	exon	164133853	164134455	98	+	.	Parent=comp157711_c1_seq1.mrna1;Target=comp157711_c1_seq1 1993 2595 -
Chr1	stalkie_big_nohaplotig	exon	164134526	164136130	97	+	.	Parent=comp157711_c1_seq1.mrna1;Target=comp157711_c1_seq1 353 1992 -
Chr1	stalkie_big_nohaplotig	exon	164136220	164136277	93	+	.	Parent=comp157711_c1_seq1.mrna1;Target=comp157711_c1_seq1 295 352 -
Chr1	stalkie_big_nohaplotig	exon	164136326	164136607	99	+	.	Parent=comp157711_c1_seq1.mrna1;Target=comp157711_c1_seq1 1 282 -
Chr1	stalkie_big_nohaplotig	CDS	164134164	164134455	.	+	0	Parent=comp157711_c1_seq1.mrna1;Target=comp157711_c1_seq1 1993 2284 .
Chr1	stalkie_big_nohaplotig	CDS	164134526	164135076	.	+	2	Parent=comp157711_c1_seq1.mrna1;Target=comp157711_c1_seq1 1442 1992 .
Chr1	stalkie_big_nohaplotig	mRNA	164134140	164135852	.	+	.	ID=FBgn0031189.1.mrna1;geneID=FBgn0031189.1.path1;Name=FBgn0031189.1;Dir=sensecoverage=100.0;identity=99.7;matches=942;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013370
Chr1	stalkie_big_nohaplotig	exon	164134140	164134455	99	+	.	Parent=FBgn0031189.1.mrna1;Target=FBgn0031189.1 1 316 +
Chr1	stalkie_big_nohaplotig	exon	164134526	164134999	100	+	.	Parent=FBgn0031189.1.mrna1;Target=FBgn0031189.1 317 790 +
Chr1	stalkie_big_nohaplotig	exon	164135698	164135852	100	+	.	Parent=FBgn0031189.1.mrna1;Target=FBgn0031189.1 791 945 +
Chr1	stalkie_big_nohaplotig	CDS	164134140	164134455	.	+	0	Parent=FBgn0031189.1.mrna1;Target=FBgn0031189.1 1 316 +
Chr1	stalkie_big_nohaplotig	CDS	164134526	164134999	.	+	2	Parent=FBgn0031189.1.mrna1;Target=FBgn0031189.1 317 790 +
Chr1	stalkie_big_nohaplotig	CDS	164135698	164135852	.	+	2	Parent=FBgn0031189.1.mrna1;Target=FBgn0031189.1 791 945 +
Chr1	gffcl	locus	164161513	164163772	.	.	.	ID=RLOC_00013372;geneIDs=comp100351_c0_seq1.path1,comp135825_c0_seq1.path1,comp161808_c0_seq1.path1;transcripts=comp161808_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164162081	164163772	.	-	.	ID=comp161808_c0_seq1.mrna1;geneID=comp161808_c0_seq1.path1;Name=comp161808_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.1;matches=1661;mismatches=20;indels=12;unknowns=0;Target=comp161808_c0_seq1 1682 1 .;CDS_Target=comp161808_c0_seq1 1196 1080 .;locus=RLOC_00013372
Chr1	stalkie_big_nohaplotig	exon	164162081	164163772	98	-	.	Parent=comp161808_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164162567	164162683	.	-	0	Parent=comp161808_c0_seq1.mrna1
Chr1	gffcl	locus	164164038	164164897	.	+	.	ID=RLOC_00013373;geneIDs=comp153083_c1_seq1.path1;transcripts=comp153083_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164164038	164164897	.	+	.	ID=comp153083_c1_seq1.mrna1;geneID=comp153083_c1_seq1.path1;Name=comp153083_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=853;mismatches=7;indels=0;unknowns=0;Target=comp153083_c1_seq1 860 1 .;CDS_Target=comp153083_c1_seq1 621 469 .;locus=RLOC_00013373
Chr1	stalkie_big_nohaplotig	exon	164164038	164164897	99	+	.	Parent=comp153083_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164164506	164164658	.	+	0	Parent=comp153083_c1_seq1.mrna1
Chr1	gffcl	locus	164169123	164170600	.	+	.	ID=RLOC_00013374;geneIDs=FBgn0036500.1.path1;transcripts=FBgn0036500.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164169123	164170600	.	+	.	ID=FBgn0036500.1.mrna1;geneID=FBgn0036500.1.path1;Name=FBgn0036500.1;Dir=sensecoverage=100.0;identity=100.0;matches=1368;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013374
Chr1	stalkie_big_nohaplotig	exon	164169123	164169225	100	+	.	Parent=FBgn0036500.1.mrna1;Target=FBgn0036500.1 1 103 +
Chr1	stalkie_big_nohaplotig	exon	164169280	164169994	100	+	.	Parent=FBgn0036500.1.mrna1;Target=FBgn0036500.1 104 818 +
Chr1	stalkie_big_nohaplotig	exon	164170051	164170600	100	+	.	Parent=FBgn0036500.1.mrna1;Target=FBgn0036500.1 819 1368 +
Chr1	stalkie_big_nohaplotig	CDS	164169123	164169225	.	+	0	Parent=FBgn0036500.1.mrna1;Target=FBgn0036500.1 1 103 +
Chr1	stalkie_big_nohaplotig	CDS	164169280	164169994	.	+	2	Parent=FBgn0036500.1.mrna1;Target=FBgn0036500.1 104 818 +
Chr1	stalkie_big_nohaplotig	CDS	164170051	164170600	.	+	1	Parent=FBgn0036500.1.mrna1;Target=FBgn0036500.1 819 1368 +
Chr1	gffcl	locus	164182059	164190891	.	-	.	ID=RLOC_00013376;geneIDs=comp130754_c1_seq1.path1;transcripts=comp130754_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164182059	164190891	.	-	.	ID=comp130754_c1_seq1.mrna1;geneID=comp130754_c1_seq1.path1;Name=comp130754_c1_seq1;Dir=indeterminatecoverage=100.0;identity=94.1;matches=224;mismatches=8;indels=6;unknowns=0;locus=RLOC_00013376
Chr1	stalkie_big_nohaplotig	exon	164182059	164182108	96	-	.	Parent=comp130754_c1_seq1.mrna1;Target=comp130754_c1_seq1 279 230 .
Chr1	stalkie_big_nohaplotig	exon	164182206	164182246	85	-	.	Parent=comp130754_c1_seq1.mrna1;Target=comp130754_c1_seq1 212 166 .
Chr1	stalkie_big_nohaplotig	exon	164190752	164190891	97	-	.	Parent=comp130754_c1_seq1.mrna1;Target=comp130754_c1_seq1 140 1 .
Chr1	stalkie_big_nohaplotig	CDS	164182106	164182108	.	-	2	Parent=comp130754_c1_seq1.mrna1;Target=comp130754_c1_seq1 232 230 .
Chr1	stalkie_big_nohaplotig	CDS	164182206	164182242	.	-	0	Parent=comp130754_c1_seq1.mrna1;Target=comp130754_c1_seq1 212 170 .
Chr1	gffcl	locus	164186366	164187267	.	-	.	ID=RLOC_00013377;geneIDs=ORF2172.path1;transcripts=ORF2172.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164186366	164187267	.	-	.	ID=ORF2172.mrna1;geneID=ORF2172.path1;Name=ORF2172;Dir=indeterminatecoverage=99.9;identity=99.1;matches=894;mismatches=8;indels=0;unknowns=0;Target=ORF2172 902 1 .;CDS_Target=ORF2172 900 1 .;locus=RLOC_00013377
Chr1	stalkie_big_nohaplotig	exon	164186366	164187267	99	-	.	Parent=ORF2172.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164186368	164187267	.	-	0	Parent=ORF2172.mrna1
Chr1	gffcl	locus	164227046	164229098	.	+	.	ID=RLOC_00013378;geneIDs=FBgn0030576.2.path1;transcripts=FBgn0030576.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164227046	164229098	.	+	.	ID=FBgn0030576.2.mrna1;geneID=FBgn0030576.2.path1;Name=FBgn0030576.2;Dir=sensecoverage=95.8;identity=99.9;matches=1742;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013378
Chr1	stalkie_big_nohaplotig	exon	164227046	164227345	100	+	.	Parent=FBgn0030576.2.mrna1;Target=FBgn0030576.2 78 377 +
Chr1	stalkie_big_nohaplotig	exon	164227412	164227813	100	+	.	Parent=FBgn0030576.2.mrna1;Target=FBgn0030576.2 378 779 +
Chr1	stalkie_big_nohaplotig	exon	164227879	164228147	99	+	.	Parent=FBgn0030576.2.mrna1;Target=FBgn0030576.2 780 1048 +
Chr1	stalkie_big_nohaplotig	exon	164228205	164228306	100	+	.	Parent=FBgn0030576.2.mrna1;Target=FBgn0030576.2 1049 1150 +
Chr1	stalkie_big_nohaplotig	exon	164228368	164228746	100	+	.	Parent=FBgn0030576.2.mrna1;Target=FBgn0030576.2 1151 1529 +
Chr1	stalkie_big_nohaplotig	exon	164228807	164229098	99	+	.	Parent=FBgn0030576.2.mrna1;Target=FBgn0030576.2 1530 1821 +
Chr1	stalkie_big_nohaplotig	CDS	164227047	164227345	.	+	0	Parent=FBgn0030576.2.mrna1;Target=FBgn0030576.2 79 377 +
Chr1	stalkie_big_nohaplotig	CDS	164227412	164227813	.	+	1	Parent=FBgn0030576.2.mrna1;Target=FBgn0030576.2 378 779 +
Chr1	stalkie_big_nohaplotig	CDS	164227879	164228147	.	+	1	Parent=FBgn0030576.2.mrna1;Target=FBgn0030576.2 780 1048 +
Chr1	stalkie_big_nohaplotig	CDS	164228205	164228306	.	+	2	Parent=FBgn0030576.2.mrna1;Target=FBgn0030576.2 1049 1150 +
Chr1	stalkie_big_nohaplotig	CDS	164228368	164228746	.	+	2	Parent=FBgn0030576.2.mrna1;Target=FBgn0030576.2 1151 1529 +
Chr1	stalkie_big_nohaplotig	CDS	164228807	164229098	.	+	1	Parent=FBgn0030576.2.mrna1;Target=FBgn0030576.2 1530 1821 +
Chr1	gffcl	locus	164241297	164241647	.	+	.	ID=RLOC_00013379;geneIDs=comp151897_c0_seq1.path1;transcripts=comp151897_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164241297	164241647	.	+	.	ID=comp151897_c0_seq1.mrna1;geneID=comp151897_c0_seq1.path1;Name=comp151897_c0_seq1;Dir=indeterminatecoverage=55.8;identity=90.1;matches=263;mismatches=7;indels=22;unknowns=0;Target=comp151897_c0_seq1 47 3 .;locus=RLOC_00013379
Chr1	stalkie_big_nohaplotig	exon	164241297	164241460	84	+	.	Parent=comp151897_c0_seq1.mrna1;Target=comp151897_c0_seq1 142 1 .
Chr1	stalkie_big_nohaplotig	exon	164241520	164241647	97	+	.	Parent=comp151897_c0_seq1.mrna1;Target=comp151897_c0_seq1 288 161 .
Chr1	stalkie_big_nohaplotig	CDS	164241299	164241344	.	+	0	Parent=comp151897_c0_seq1.mrna1
Chr1	gffcl	locus	164301365	164303885	.	-	.	ID=RLOC_00013381;geneIDs=FBgn0013987.1.path1;transcripts=FBgn0013987.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164301365	164303885	.	-	.	ID=FBgn0013987.1.mrna1;geneID=FBgn0013987.1.path1;Name=FBgn0013987.1;Dir=sensecoverage=100.0;identity=99.8;matches=1093;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013381
Chr1	stalkie_big_nohaplotig	exon	164301365	164301451	100	-	.	Parent=FBgn0013987.1.mrna1;Target=FBgn0013987.1 1009 1095 +
Chr1	stalkie_big_nohaplotig	exon	164301522	164301937	99	-	.	Parent=FBgn0013987.1.mrna1;Target=FBgn0013987.1 593 1008 +
Chr1	stalkie_big_nohaplotig	exon	164302005	164302211	100	-	.	Parent=FBgn0013987.1.mrna1;Target=FBgn0013987.1 386 592 +
Chr1	stalkie_big_nohaplotig	exon	164303223	164303287	98	-	.	Parent=FBgn0013987.1.mrna1;Target=FBgn0013987.1 321 385 +
Chr1	stalkie_big_nohaplotig	exon	164303424	164303563	100	-	.	Parent=FBgn0013987.1.mrna1;Target=FBgn0013987.1 181 320 +
Chr1	stalkie_big_nohaplotig	exon	164303706	164303885	100	-	.	Parent=FBgn0013987.1.mrna1;Target=FBgn0013987.1 1 180 +
Chr1	stalkie_big_nohaplotig	CDS	164301365	164301451	.	-	0	Parent=FBgn0013987.1.mrna1;Target=FBgn0013987.1 1009 1095 +
Chr1	stalkie_big_nohaplotig	CDS	164301522	164301937	.	-	2	Parent=FBgn0013987.1.mrna1;Target=FBgn0013987.1 593 1008 +
Chr1	stalkie_big_nohaplotig	CDS	164302005	164302211	.	-	2	Parent=FBgn0013987.1.mrna1;Target=FBgn0013987.1 386 592 +
Chr1	stalkie_big_nohaplotig	CDS	164303223	164303287	.	-	1	Parent=FBgn0013987.1.mrna1;Target=FBgn0013987.1 321 385 +
Chr1	stalkie_big_nohaplotig	CDS	164303424	164303563	.	-	0	Parent=FBgn0013987.1.mrna1;Target=FBgn0013987.1 181 320 +
Chr1	stalkie_big_nohaplotig	CDS	164303706	164303885	.	-	0	Parent=FBgn0013987.1.mrna1;Target=FBgn0013987.1 1 180 +
Chr1	gffcl	locus	164306792	164307368	.	+	.	ID=RLOC_00013382;geneIDs=comp146605_c0_seq1.path1;transcripts=comp146605_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164306792	164307368	.	+	.	ID=comp146605_c0_seq1.mrna1;geneID=comp146605_c0_seq1.path1;Name=comp146605_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=576;mismatches=1;indels=0;unknowns=0;Target=comp146605_c0_seq1 578 2 .;CDS_Target=comp146605_c0_seq1 190 2 .;locus=RLOC_00013382
Chr1	stalkie_big_nohaplotig	exon	164306792	164307368	99	+	.	Parent=comp146605_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164306792	164306980	.	+	0	Parent=comp146605_c0_seq1.mrna1
Chr1	gffcl	locus	164309844	164310772	.	-	.	ID=RLOC_00013383;geneIDs=FBgn0015374.1.path1;transcripts=FBgn0015374.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164309844	164310772	.	-	.	ID=FBgn0015374.1.mrna1;geneID=FBgn0015374.1.path1;Name=FBgn0015374.1;Dir=sensecoverage=100.0;identity=99.8;matches=515;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013383
Chr1	stalkie_big_nohaplotig	exon	164309844	164309959	99	-	.	Parent=FBgn0015374.1.mrna1;Target=FBgn0015374.1 401 516 +
Chr1	stalkie_big_nohaplotig	exon	164310029	164310169	100	-	.	Parent=FBgn0015374.1.mrna1;Target=FBgn0015374.1 260 400 +
Chr1	stalkie_big_nohaplotig	exon	164310228	164310346	100	-	.	Parent=FBgn0015374.1.mrna1;Target=FBgn0015374.1 141 259 +
Chr1	stalkie_big_nohaplotig	exon	164310398	164310479	100	-	.	Parent=FBgn0015374.1.mrna1;Target=FBgn0015374.1 59 140 +
Chr1	stalkie_big_nohaplotig	exon	164310715	164310772	100	-	.	Parent=FBgn0015374.1.mrna1;Target=FBgn0015374.1 1 58 +
Chr1	stalkie_big_nohaplotig	CDS	164309844	164309959	.	-	2	Parent=FBgn0015374.1.mrna1;Target=FBgn0015374.1 401 516 +
Chr1	stalkie_big_nohaplotig	CDS	164310029	164310169	.	-	2	Parent=FBgn0015374.1.mrna1;Target=FBgn0015374.1 260 400 +
Chr1	stalkie_big_nohaplotig	CDS	164310228	164310346	.	-	1	Parent=FBgn0015374.1.mrna1;Target=FBgn0015374.1 141 259 +
Chr1	stalkie_big_nohaplotig	CDS	164310398	164310479	.	-	2	Parent=FBgn0015374.1.mrna1;Target=FBgn0015374.1 59 140 +
Chr1	stalkie_big_nohaplotig	CDS	164310715	164310772	.	-	0	Parent=FBgn0015374.1.mrna1;Target=FBgn0015374.1 1 58 +
Chr1	gffcl	locus	164316644	164317361	.	-	.	ID=RLOC_00013384;geneIDs=comp149765_c0_seq1.path1;transcripts=comp149765_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164316644	164317361	.	-	.	ID=comp149765_c0_seq1.mrna1;geneID=comp149765_c0_seq1.path1;Name=comp149765_c0_seq1;Dir=indeterminatecoverage=98.4;identity=96.0;matches=701;mismatches=5;indels=24;unknowns=0;Target=comp149765_c0_seq1 723 6 .;CDS_Target=comp149765_c0_seq1 214 125 .;locus=RLOC_00013384
Chr1	stalkie_big_nohaplotig	exon	164316644	164317361	96	-	.	Parent=comp149765_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164317164	164317253	.	-	0	Parent=comp149765_c0_seq1.mrna1
Chr1	gffcl	locus	164320137	164409763	.	-	.	ID=RLOC_00013385;geneIDs=FBgn0015773.1.path1;transcripts=FBgn0015773.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164320137	164409763	.	-	.	ID=FBgn0015773.1.mrna1;geneID=FBgn0015773.1.path1;Name=FBgn0015773.1;Dir=sensecoverage=100.0;identity=99.7;matches=1924;mismatches=5;indels=0;unknowns=0;locus=RLOC_00013385
Chr1	stalkie_big_nohaplotig	exon	164320137	164320350	100	-	.	Parent=FBgn0015773.1.mrna1;Target=FBgn0015773.1 1716 1929 +
Chr1	stalkie_big_nohaplotig	exon	164320502	164320567	100	-	.	Parent=FBgn0015773.1.mrna1;Target=FBgn0015773.1 1650 1715 +
Chr1	stalkie_big_nohaplotig	exon	164325525	164325630	100	-	.	Parent=FBgn0015773.1.mrna1;Target=FBgn0015773.1 1544 1649 +
Chr1	stalkie_big_nohaplotig	exon	164325714	164325863	100	-	.	Parent=FBgn0015773.1.mrna1;Target=FBgn0015773.1 1394 1543 +
Chr1	stalkie_big_nohaplotig	exon	164346958	164347146	100	-	.	Parent=FBgn0015773.1.mrna1;Target=FBgn0015773.1 1205 1393 +
Chr1	stalkie_big_nohaplotig	exon	164408560	164409763	99	-	.	Parent=FBgn0015773.1.mrna1;Target=FBgn0015773.1 1 1204 +
Chr1	stalkie_big_nohaplotig	CDS	164320137	164320350	.	-	1	Parent=FBgn0015773.1.mrna1;Target=FBgn0015773.1 1716 1929 +
Chr1	stalkie_big_nohaplotig	CDS	164320502	164320567	.	-	1	Parent=FBgn0015773.1.mrna1;Target=FBgn0015773.1 1650 1715 +
Chr1	stalkie_big_nohaplotig	CDS	164325525	164325630	.	-	2	Parent=FBgn0015773.1.mrna1;Target=FBgn0015773.1 1544 1649 +
Chr1	stalkie_big_nohaplotig	CDS	164325714	164325863	.	-	2	Parent=FBgn0015773.1.mrna1;Target=FBgn0015773.1 1394 1543 +
Chr1	stalkie_big_nohaplotig	CDS	164346958	164347146	.	-	2	Parent=FBgn0015773.1.mrna1;Target=FBgn0015773.1 1205 1393 +
Chr1	stalkie_big_nohaplotig	CDS	164408560	164409763	.	-	0	Parent=FBgn0015773.1.mrna1;Target=FBgn0015773.1 1 1204 +
Chr1	gffcl	locus	164341856	164342519	.	-	.	ID=RLOC_00013386;geneIDs=comp147454_c0_seq1.path1;transcripts=comp147454_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164341856	164342519	.	-	.	ID=comp147454_c0_seq1.mrna1;geneID=comp147454_c0_seq1.path1;Name=comp147454_c0_seq1;Dir=antisensecoverage=98.4;identity=99.8;matches=607;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013386
Chr1	stalkie_big_nohaplotig	exon	164341856	164342210	99	-	.	Parent=comp147454_c0_seq1.mrna1;Target=comp147454_c0_seq1 2 356 -
Chr1	stalkie_big_nohaplotig	exon	164342267	164342519	100	-	.	Parent=comp147454_c0_seq1.mrna1;Target=comp147454_c0_seq1 357 609 -
Chr1	stalkie_big_nohaplotig	CDS	164342082	164342210	.	-	0	Parent=comp147454_c0_seq1.mrna1;Target=comp147454_c0_seq1 228 356 .
Chr1	stalkie_big_nohaplotig	CDS	164342267	164342377	.	-	0	Parent=comp147454_c0_seq1.mrna1;Target=comp147454_c0_seq1 357 467 .
Chr1	gffcl	locus	164451494	164453870	.	+	.	ID=RLOC_00013387;geneIDs=FBgn0030575.1.path1,comp149593_c0_seq1.path1;transcripts=FBgn0030575.1.mrna1,comp149593_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164451494	164453870	.	+	.	ID=FBgn0030575.1.mrna1;geneID=FBgn0030575.1.path1;Name=FBgn0030575.1;Dir=sensecoverage=100.0;identity=99.5;matches=1323;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013387
Chr1	stalkie_big_nohaplotig	exon	164451494	164451841	99	+	.	Parent=FBgn0030575.1.mrna1;Target=FBgn0030575.1 1 348 +
Chr1	stalkie_big_nohaplotig	exon	164451908	164452124	99	+	.	Parent=FBgn0030575.1.mrna1;Target=FBgn0030575.1 349 565 +
Chr1	stalkie_big_nohaplotig	exon	164452621	164452747	99	+	.	Parent=FBgn0030575.1.mrna1;Target=FBgn0030575.1 566 692 +
Chr1	stalkie_big_nohaplotig	exon	164452883	164453191	99	+	.	Parent=FBgn0030575.1.mrna1;Target=FBgn0030575.1 693 1001 +
Chr1	stalkie_big_nohaplotig	exon	164453543	164453870	100	+	.	Parent=FBgn0030575.1.mrna1;Target=FBgn0030575.1 1002 1329 +
Chr1	stalkie_big_nohaplotig	CDS	164451494	164451841	.	+	0	Parent=FBgn0030575.1.mrna1;Target=FBgn0030575.1 1 348 +
Chr1	stalkie_big_nohaplotig	CDS	164451908	164452124	.	+	0	Parent=FBgn0030575.1.mrna1;Target=FBgn0030575.1 349 565 +
Chr1	stalkie_big_nohaplotig	CDS	164452621	164452747	.	+	2	Parent=FBgn0030575.1.mrna1;Target=FBgn0030575.1 566 692 +
Chr1	stalkie_big_nohaplotig	CDS	164452883	164453191	.	+	1	Parent=FBgn0030575.1.mrna1;Target=FBgn0030575.1 693 1001 +
Chr1	stalkie_big_nohaplotig	CDS	164453543	164453870	.	+	1	Parent=FBgn0030575.1.mrna1;Target=FBgn0030575.1 1002 1329 +
Chr1	stalkie_big_nohaplotig	mRNA	164453168	164453602	.	+	.	ID=comp149593_c0_seq1.mrna1;geneID=comp149593_c0_seq1.path1;Name=comp149593_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=430;mismatches=5;indels=0;unknowns=0;Target=comp149593_c0_seq1 435 1 .;CDS_Target=comp149593_c0_seq1 384 1 .;locus=RLOC_00013387
Chr1	stalkie_big_nohaplotig	exon	164453168	164453602	98	+	.	Parent=comp149593_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164453168	164453551	.	+	0	Parent=comp149593_c0_seq1.mrna1
Chr1	gffcl	locus	164461835	164462058	.	-	.	ID=RLOC_00013388;geneIDs=comp116775_c0_seq1.path1;transcripts=comp116775_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164461835	164462058	.	-	.	ID=comp116775_c0_seq1.mrna1;geneID=comp116775_c0_seq1.path1;Name=comp116775_c0_seq1;Dir=indeterminatecoverage=68.1;identity=100.0;matches=224;mismatches=0;indels=0;unknowns=0;Target=comp116775_c0_seq1 302 79 .;CDS_Target=comp116775_c0_seq1 101 81 .;locus=RLOC_00013388
Chr1	stalkie_big_nohaplotig	exon	164461835	164462058	100	-	.	Parent=comp116775_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164462036	164462056	.	-	0	Parent=comp116775_c0_seq1.mrna1
Chr1	gffcl	locus	164462714	164464177	.	+	.	ID=RLOC_00013389;geneIDs=comp160364_c0_seq1.path1;transcripts=comp160364_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164462714	164464177	.	+	.	ID=comp160364_c0_seq1.mrna1;geneID=comp160364_c0_seq1.path1;Name=comp160364_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1445;mismatches=18;indels=1;unknowns=0;Target=comp160364_c0_seq1 1463 1 .;CDS_Target=comp160364_c0_seq1 977 786 .;locus=RLOC_00013389
Chr1	stalkie_big_nohaplotig	exon	164462714	164464177	98	+	.	Parent=comp160364_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164463499	164463691	.	+	0	Parent=comp160364_c0_seq1.mrna1
Chr1	gffcl	locus	164464278	164465231	.	-	.	ID=RLOC_00013390;geneIDs=comp162470_c0_seq1.path1;transcripts=comp162470_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164464278	164465231	.	-	.	ID=comp162470_c0_seq1.mrna1;geneID=comp162470_c0_seq1.path1;Name=comp162470_c0_seq1;Dir=indeterminatecoverage=81.4;identity=93.3;matches=891;mismatches=50;indels=14;unknowns=0;Target=comp162470_c0_seq1 1157 216 .;CDS_Target=comp162470_c0_seq1 865 716 .;locus=RLOC_00013390
Chr1	stalkie_big_nohaplotig	exon	164464278	164465231	93	-	.	Parent=comp162470_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164464575	164464728	.	-	0	Parent=comp162470_c0_seq1.mrna1
Chr1	gffcl	locus	164465279	164466720	.	+	.	ID=RLOC_00013391;geneIDs=comp161263_c0_seq1.path1;transcripts=comp161263_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164465279	164466720	.	+	.	ID=comp161263_c0_seq1.mrna1;geneID=comp161263_c0_seq1.path1;Name=comp161263_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.0;matches=1407;mismatches=15;indels=43;unknowns=0;Target=comp161263_c0_seq1 1445 1 .;CDS_Target=comp161263_c0_seq1 318 127 .;locus=RLOC_00013391
Chr1	stalkie_big_nohaplotig	exon	164465279	164466720	96	+	.	Parent=comp161263_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164465382	164465573	.	+	0	Parent=comp161263_c0_seq1.mrna1
Chr1	gffcl	locus	164468389	164474127	.	-	.	ID=RLOC_00013392;geneIDs=FBgn0015774.1.path2;transcripts=FBgn0015774.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	164468389	164474127	.	-	.	ID=FBgn0015774.1.mrna2;geneID=FBgn0015774.1.path2;Name=FBgn0015774.1;Dir=sensecoverage=46.6;identity=99.4;matches=858;mismatches=5;indels=0;unknowns=0;locus=RLOC_00013392
Chr1	stalkie_big_nohaplotig	exon	164468389	164468527	100	-	.	Parent=FBgn0015774.1.mrna2;Target=FBgn0015774.1 1713 1851 +
Chr1	stalkie_big_nohaplotig	exon	164468640	164468871	98	-	.	Parent=FBgn0015774.1.mrna2;Target=FBgn0015774.1 1481 1712 +
Chr1	stalkie_big_nohaplotig	exon	164469021	164469086	98	-	.	Parent=FBgn0015774.1.mrna2;Target=FBgn0015774.1 1415 1480 +
Chr1	stalkie_big_nohaplotig	exon	164469203	164469289	100	-	.	Parent=FBgn0015774.1.mrna2;Target=FBgn0015774.1 1328 1414 +
Chr1	stalkie_big_nohaplotig	exon	164469374	164469523	100	-	.	Parent=FBgn0015774.1.mrna2;Target=FBgn0015774.1 1178 1327 +
Chr1	stalkie_big_nohaplotig	exon	164473939	164474127	100	-	.	Parent=FBgn0015774.1.mrna2;Target=FBgn0015774.1 989 1177 +
Chr1	stalkie_big_nohaplotig	CDS	164468389	164468527	.	-	0	Parent=FBgn0015774.1.mrna2;Target=FBgn0015774.1 1713 1851 +
Chr1	stalkie_big_nohaplotig	CDS	164468640	164468871	.	-	1	Parent=FBgn0015774.1.mrna2;Target=FBgn0015774.1 1481 1712 +
Chr1	stalkie_big_nohaplotig	CDS	164469021	164469086	.	-	1	Parent=FBgn0015774.1.mrna2;Target=FBgn0015774.1 1415 1480 +
Chr1	stalkie_big_nohaplotig	CDS	164469203	164469289	.	-	1	Parent=FBgn0015774.1.mrna2;Target=FBgn0015774.1 1328 1414 +
Chr1	stalkie_big_nohaplotig	CDS	164469374	164469523	.	-	1	Parent=FBgn0015774.1.mrna2;Target=FBgn0015774.1 1178 1327 +
Chr1	stalkie_big_nohaplotig	CDS	164473939	164474127	.	-	1	Parent=FBgn0015774.1.mrna2;Target=FBgn0015774.1 989 1177 +
Chr1	gffcl	locus	164544365	164546885	.	+	.	ID=RLOC_00013393;geneIDs=FBgn0013987.1.path2;transcripts=FBgn0013987.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	164544365	164546885	.	+	.	ID=FBgn0013987.1.mrna2;geneID=FBgn0013987.1.path2;Name=FBgn0013987.1;Dir=sensecoverage=100.0;identity=99.8;matches=1093;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013393
Chr1	stalkie_big_nohaplotig	exon	164544365	164544544	100	+	.	Parent=FBgn0013987.1.mrna2;Target=FBgn0013987.1 1 180 +
Chr1	stalkie_big_nohaplotig	exon	164544687	164544826	100	+	.	Parent=FBgn0013987.1.mrna2;Target=FBgn0013987.1 181 320 +
Chr1	stalkie_big_nohaplotig	exon	164544963	164545027	98	+	.	Parent=FBgn0013987.1.mrna2;Target=FBgn0013987.1 321 385 +
Chr1	stalkie_big_nohaplotig	exon	164546039	164546245	100	+	.	Parent=FBgn0013987.1.mrna2;Target=FBgn0013987.1 386 592 +
Chr1	stalkie_big_nohaplotig	exon	164546313	164546728	99	+	.	Parent=FBgn0013987.1.mrna2;Target=FBgn0013987.1 593 1008 +
Chr1	stalkie_big_nohaplotig	exon	164546799	164546885	100	+	.	Parent=FBgn0013987.1.mrna2;Target=FBgn0013987.1 1009 1095 +
Chr1	stalkie_big_nohaplotig	CDS	164544365	164544544	.	+	0	Parent=FBgn0013987.1.mrna2;Target=FBgn0013987.1 1 180 +
Chr1	stalkie_big_nohaplotig	CDS	164544687	164544826	.	+	0	Parent=FBgn0013987.1.mrna2;Target=FBgn0013987.1 181 320 +
Chr1	stalkie_big_nohaplotig	CDS	164544963	164545027	.	+	1	Parent=FBgn0013987.1.mrna2;Target=FBgn0013987.1 321 385 +
Chr1	stalkie_big_nohaplotig	CDS	164546039	164546245	.	+	2	Parent=FBgn0013987.1.mrna2;Target=FBgn0013987.1 386 592 +
Chr1	stalkie_big_nohaplotig	CDS	164546313	164546728	.	+	2	Parent=FBgn0013987.1.mrna2;Target=FBgn0013987.1 593 1008 +
Chr1	stalkie_big_nohaplotig	CDS	164546799	164546885	.	+	0	Parent=FBgn0013987.1.mrna2;Target=FBgn0013987.1 1009 1095 +
Chr1	gffcl	locus	164548520	164551128	.	-	.	ID=RLOC_00013394;geneIDs=FBgn0029801.1.path1;transcripts=FBgn0029801.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164548520	164551128	.	-	.	ID=FBgn0029801.1.mrna1;geneID=FBgn0029801.1.path1;Name=FBgn0029801.1;Dir=sensecoverage=100.0;identity=99.8;matches=1036;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013394
Chr1	stalkie_big_nohaplotig	exon	164548520	164548903	100	-	.	Parent=FBgn0029801.1.mrna1;Target=FBgn0029801.1 655 1038 +
Chr1	stalkie_big_nohaplotig	exon	164548975	164549460	99	-	.	Parent=FBgn0029801.1.mrna1;Target=FBgn0029801.1 169 654 +
Chr1	stalkie_big_nohaplotig	exon	164550961	164551128	100	-	.	Parent=FBgn0029801.1.mrna1;Target=FBgn0029801.1 1 168 +
Chr1	stalkie_big_nohaplotig	CDS	164548520	164548903	.	-	0	Parent=FBgn0029801.1.mrna1;Target=FBgn0029801.1 655 1038 +
Chr1	stalkie_big_nohaplotig	CDS	164548975	164549460	.	-	0	Parent=FBgn0029801.1.mrna1;Target=FBgn0029801.1 169 654 +
Chr1	stalkie_big_nohaplotig	CDS	164550961	164551128	.	-	0	Parent=FBgn0029801.1.mrna1;Target=FBgn0029801.1 1 168 +
Chr1	gffcl	locus	164551605	164552437	.	+	.	ID=RLOC_00013395;geneIDs=AAEL004552.1.path1;transcripts=AAEL004552.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164551605	164552437	.	+	.	ID=AAEL004552.1.mrna1;geneID=AAEL004552.1.path1;Name=AAEL004552.1;Dir=sensecoverage=100.0;identity=99.5;matches=406;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013395
Chr1	stalkie_big_nohaplotig	exon	164551605	164551677	100	+	.	Parent=AAEL004552.1.mrna1;Target=AAEL004552.1 1 73 +
Chr1	stalkie_big_nohaplotig	exon	164551729	164551818	100	+	.	Parent=AAEL004552.1.mrna1;Target=AAEL004552.1 74 163 +
Chr1	stalkie_big_nohaplotig	exon	164552136	164552240	98	+	.	Parent=AAEL004552.1.mrna1;Target=AAEL004552.1 164 268 +
Chr1	stalkie_big_nohaplotig	exon	164552298	164552437	100	+	.	Parent=AAEL004552.1.mrna1;Target=AAEL004552.1 269 408 +
Chr1	stalkie_big_nohaplotig	CDS	164551605	164551677	.	+	0	Parent=AAEL004552.1.mrna1;Target=AAEL004552.1 1 73 +
Chr1	stalkie_big_nohaplotig	CDS	164551729	164551818	.	+	2	Parent=AAEL004552.1.mrna1;Target=AAEL004552.1 74 163 +
Chr1	stalkie_big_nohaplotig	CDS	164552136	164552240	.	+	2	Parent=AAEL004552.1.mrna1;Target=AAEL004552.1 164 268 +
Chr1	stalkie_big_nohaplotig	CDS	164552298	164552437	.	+	2	Parent=AAEL004552.1.mrna1;Target=AAEL004552.1 269 408 +
Chr1	gffcl	locus	164554386	164554919	.	+	.	ID=RLOC_00013396;geneIDs=FBgn0029799.1.path1;transcripts=FBgn0029799.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164554386	164554919	.	+	.	ID=FBgn0029799.1.mrna1;geneID=FBgn0029799.1.path1;Name=FBgn0029799.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=534;mismatches=0;indels=0;unknowns=0;Target=FBgn0029799.1 534 1 .;locus=RLOC_00013396
Chr1	stalkie_big_nohaplotig	exon	164554386	164554919	100	+	.	Parent=FBgn0029799.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164554386	164554919	.	+	0	Parent=FBgn0029799.1.mrna1
Chr1	gffcl	locus	164555421	164555882	.	+	.	ID=RLOC_00013397;geneIDs=comp152464_c0_seq1.path1;transcripts=comp152464_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164555421	164555882	.	+	.	ID=comp152464_c0_seq1.mrna1;geneID=comp152464_c0_seq1.path1;Name=comp152464_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=454;mismatches=8;indels=1;unknowns=0;Target=comp152464_c0_seq1 463 1 .;CDS_Target=comp152464_c0_seq1 25 2 .;locus=RLOC_00013397
Chr1	stalkie_big_nohaplotig	exon	164555421	164555882	98	+	.	Parent=comp152464_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164555422	164555444	.	+	0	Parent=comp152464_c0_seq1.mrna1
Chr1	gffcl	locus	164558640	164559198	.	+	.	ID=RLOC_00013398;geneIDs=CPIJ017423.path4;transcripts=CPIJ017423.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	164558640	164559198	.	+	.	ID=CPIJ017423.mrna4;geneID=CPIJ017423.path4;Name=CPIJ017423;Dir=indeterminatecoverage=93.6;identity=99.1;matches=554;mismatches=5;indels=0;unknowns=0;Target=CPIJ017423 597 39 .;CDS_Target=CPIJ017423 597 40 .;locus=RLOC_00013398
Chr1	stalkie_big_nohaplotig	exon	164558640	164559198	99	+	.	Parent=CPIJ017423.mrna4
Chr1	stalkie_big_nohaplotig	CDS	164558641	164559198	.	+	0	Parent=CPIJ017423.mrna4
Chr1	gffcl	locus	164559502	164563312	.	-	.	ID=RLOC_00013399;geneIDs=FBgn0029798.1.path1;transcripts=FBgn0029798.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164559502	164563312	.	-	.	ID=FBgn0029798.1.mrna1;geneID=FBgn0029798.1.path1;Name=FBgn0029798.1;Dir=sensecoverage=100.0;identity=99.6;matches=2983;mismatches=8;indels=3;unknowns=0;locus=RLOC_00013399
Chr1	stalkie_big_nohaplotig	exon	164559502	164559708	99	-	.	Parent=FBgn0029798.1.mrna1;Target=FBgn0029798.1 2788 2994 +
Chr1	stalkie_big_nohaplotig	exon	164559923	164560183	97	-	.	Parent=FBgn0029798.1.mrna1;Target=FBgn0029798.1 2524 2787 +
Chr1	stalkie_big_nohaplotig	exon	164560426	164560555	100	-	.	Parent=FBgn0029798.1.mrna1;Target=FBgn0029798.1 2394 2523 +
Chr1	stalkie_big_nohaplotig	exon	164560643	164560788	100	-	.	Parent=FBgn0029798.1.mrna1;Target=FBgn0029798.1 2248 2393 +
Chr1	stalkie_big_nohaplotig	exon	164560846	164561094	100	-	.	Parent=FBgn0029798.1.mrna1;Target=FBgn0029798.1 1999 2247 +
Chr1	stalkie_big_nohaplotig	exon	164561149	164561563	99	-	.	Parent=FBgn0029798.1.mrna1;Target=FBgn0029798.1 1584 1998 +
Chr1	stalkie_big_nohaplotig	exon	164561620	164561826	100	-	.	Parent=FBgn0029798.1.mrna1;Target=FBgn0029798.1 1377 1583 +
Chr1	stalkie_big_nohaplotig	exon	164561882	164562207	99	-	.	Parent=FBgn0029798.1.mrna1;Target=FBgn0029798.1 1051 1376 +
Chr1	stalkie_big_nohaplotig	exon	164562263	164563312	100	-	.	Parent=FBgn0029798.1.mrna1;Target=FBgn0029798.1 1 1050 +
Chr1	stalkie_big_nohaplotig	CDS	164559502	164559708	.	-	0	Parent=FBgn0029798.1.mrna1;Target=FBgn0029798.1 2788 2994 +
Chr1	stalkie_big_nohaplotig	CDS	164559923	164560183	.	-	0	Parent=FBgn0029798.1.mrna1;Target=FBgn0029798.1 2524 2787 +
Chr1	stalkie_big_nohaplotig	CDS	164560426	164560555	.	-	1	Parent=FBgn0029798.1.mrna1;Target=FBgn0029798.1 2394 2523 +
Chr1	stalkie_big_nohaplotig	CDS	164560643	164560788	.	-	0	Parent=FBgn0029798.1.mrna1;Target=FBgn0029798.1 2248 2393 +
Chr1	stalkie_big_nohaplotig	CDS	164560846	164561094	.	-	0	Parent=FBgn0029798.1.mrna1;Target=FBgn0029798.1 1999 2247 +
Chr1	stalkie_big_nohaplotig	CDS	164561149	164561563	.	-	1	Parent=FBgn0029798.1.mrna1;Target=FBgn0029798.1 1584 1998 +
Chr1	stalkie_big_nohaplotig	CDS	164561620	164561826	.	-	1	Parent=FBgn0029798.1.mrna1;Target=FBgn0029798.1 1377 1583 +
Chr1	stalkie_big_nohaplotig	CDS	164561882	164562207	.	-	0	Parent=FBgn0029798.1.mrna1;Target=FBgn0029798.1 1051 1376 +
Chr1	stalkie_big_nohaplotig	CDS	164562263	164563312	.	-	0	Parent=FBgn0029798.1.mrna1;Target=FBgn0029798.1 1 1050 +
Chr1	gffcl	locus	164567242	164568220	.	-	.	ID=RLOC_00013401;geneIDs=comp150077_c0_seq1.path1;transcripts=comp150077_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164567242	164568220	.	-	.	ID=comp150077_c0_seq1.mrna1;geneID=comp150077_c0_seq1.path1;Name=comp150077_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.5;matches=807;mismatches=2;indels=2;unknowns=0;locus=RLOC_00013401
Chr1	stalkie_big_nohaplotig	exon	164567242	164568004	99	-	.	Parent=comp150077_c0_seq1.mrna1;Target=comp150077_c0_seq1 811 47 .
Chr1	stalkie_big_nohaplotig	exon	164568175	164568220	97	-	.	Parent=comp150077_c0_seq1.mrna1;Target=comp150077_c0_seq1 46 1 .
Chr1	stalkie_big_nohaplotig	CDS	164567966	164568004	.	-	0	Parent=comp150077_c0_seq1.mrna1;Target=comp150077_c0_seq1 85 47 .
Chr1	stalkie_big_nohaplotig	CDS	164568175	164568219	.	-	0	Parent=comp150077_c0_seq1.mrna1;Target=comp150077_c0_seq1 46 2 .
Chr1	gffcl	locus	164577047	164594772	.	.	.	ID=RLOC_00013402;geneIDs=FBgn0031037.1.path1,comp150130_c0_seq1.path1,comp152444_c0_seq1.path1,comp159547_c0_seq1.path1;transcripts=FBgn0031037.1.mrna1,comp152444_c0_seq1.mrna1,comp159547_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164577047	164594772	.	+	.	ID=FBgn0031037.1.mrna1;geneID=FBgn0031037.1.path1;Name=FBgn0031037.1;Dir=sensecoverage=100.0;identity=100.0;matches=561;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013402
Chr1	stalkie_big_nohaplotig	exon	164577047	164577237	100	+	.	Parent=FBgn0031037.1.mrna1;Target=FBgn0031037.1 1 191 +
Chr1	stalkie_big_nohaplotig	exon	164592159	164592240	100	+	.	Parent=FBgn0031037.1.mrna1;Target=FBgn0031037.1 192 273 +
Chr1	stalkie_big_nohaplotig	exon	164593118	164593213	100	+	.	Parent=FBgn0031037.1.mrna1;Target=FBgn0031037.1 274 369 +
Chr1	stalkie_big_nohaplotig	exon	164594581	164594772	100	+	.	Parent=FBgn0031037.1.mrna1;Target=FBgn0031037.1 370 561 +
Chr1	stalkie_big_nohaplotig	CDS	164577047	164577237	.	+	0	Parent=FBgn0031037.1.mrna1;Target=FBgn0031037.1 1 191 +
Chr1	stalkie_big_nohaplotig	CDS	164592159	164592240	.	+	1	Parent=FBgn0031037.1.mrna1;Target=FBgn0031037.1 192 273 +
Chr1	stalkie_big_nohaplotig	CDS	164593118	164593213	.	+	0	Parent=FBgn0031037.1.mrna1;Target=FBgn0031037.1 274 369 +
Chr1	stalkie_big_nohaplotig	CDS	164594581	164594772	.	+	0	Parent=FBgn0031037.1.mrna1;Target=FBgn0031037.1 370 561 +
Chr1	stalkie_big_nohaplotig	mRNA	164591312	164592179	.	-	.	ID=comp152444_c0_seq1.mrna1;geneID=comp152444_c0_seq1.path1;Name=comp152444_c0_seq1;Dir=indeterminatecoverage=99.5;identity=98.4;matches=855;mismatches=11;indels=3;unknowns=0;Target=comp152444_c0_seq1 867 1 .;CDS_Target=comp152444_c0_seq1 684 661 .;locus=RLOC_00013402
Chr1	stalkie_big_nohaplotig	exon	164591312	164592179	98	-	.	Parent=comp152444_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164591495	164591517	.	-	0	Parent=comp152444_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164593857	164594626	.	+	.	ID=comp159547_c0_seq1.mrna1;geneID=comp159547_c0_seq1.path1;Name=comp159547_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.2;matches=753;mismatches=17;indels=13;unknowns=0;Target=comp159547_c0_seq1 783 1 .;CDS_Target=comp159547_c0_seq1 622 608 .;locus=RLOC_00013402
Chr1	stalkie_big_nohaplotig	exon	164593857	164594626	96	+	.	Parent=comp159547_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164594462	164594474	.	+	0	Parent=comp159547_c0_seq1.mrna1
Chr1	gffcl	locus	164580175	164580637	.	+	.	ID=RLOC_00013403;geneIDs=comp153032_c0_seq1.path1;transcripts=comp153032_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164580175	164580637	.	+	.	ID=comp153032_c0_seq1.mrna1;geneID=comp153032_c0_seq1.path1;Name=comp153032_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.7;matches=459;mismatches=4;indels=27;unknowns=0;Target=comp153032_c0_seq1 490 1 .;CDS_Target=comp153032_c0_seq1 321 256 .;locus=RLOC_00013403
Chr1	stalkie_big_nohaplotig	exon	164580175	164580637	93	+	.	Parent=comp153032_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164580408	164580473	.	+	0	Parent=comp153032_c0_seq1.mrna1
Chr1	gffcl	locus	164583068	164583680	.	+	.	ID=RLOC_00013404;geneIDs=comp146186_c0_seq1.path1;transcripts=comp146186_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164583068	164583680	.	+	.	ID=comp146186_c0_seq1.mrna1;geneID=comp146186_c0_seq1.path1;Name=comp146186_c0_seq1;Dir=indeterminatecoverage=88.7;identity=98.1;matches=572;mismatches=10;indels=1;unknowns=0;Target=comp146186_c0_seq1 197 75 .;locus=RLOC_00013404
Chr1	stalkie_big_nohaplotig	exon	164583068	164583435	98	+	.	Parent=comp146186_c0_seq1.mrna1;Target=comp146186_c0_seq1 443 75 .
Chr1	stalkie_big_nohaplotig	exon	164583467	164583680	96	+	.	Parent=comp146186_c0_seq1.mrna1;Target=comp146186_c0_seq1 657 444 .
Chr1	stalkie_big_nohaplotig	CDS	164583068	164583190	.	+	0	Parent=comp146186_c0_seq1.mrna1
Chr1	gffcl	locus	164598608	164599264	.	-	.	ID=RLOC_00013405;geneIDs=comp153861_c0_seq1.path1;transcripts=comp153861_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164598608	164599264	.	-	.	ID=comp153861_c0_seq1.mrna1;geneID=comp153861_c0_seq1.path1;Name=comp153861_c0_seq1;Dir=antisensecoverage=99.8;identity=99.5;matches=597;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013405
Chr1	stalkie_big_nohaplotig	exon	164598608	164598771	100	-	.	Parent=comp153861_c0_seq1.mrna1;Target=comp153861_c0_seq1 2 165 -
Chr1	stalkie_big_nohaplotig	exon	164598829	164599264	99	-	.	Parent=comp153861_c0_seq1.mrna1;Target=comp153861_c0_seq1 166 601 -
Chr1	stalkie_big_nohaplotig	CDS	164598755	164598771	.	-	2	Parent=comp153861_c0_seq1.mrna1;Target=comp153861_c0_seq1 149 165 .
Chr1	stalkie_big_nohaplotig	CDS	164598829	164599102	.	-	0	Parent=comp153861_c0_seq1.mrna1;Target=comp153861_c0_seq1 166 439 .
Chr1	gffcl	locus	164599480	164599942	.	-	.	ID=RLOC_00013406;geneIDs=FBgn0031040.1.path1;transcripts=FBgn0031040.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164599480	164599942	.	-	.	ID=FBgn0031040.1.mrna1;geneID=FBgn0031040.1.path1;Name=FBgn0031040.1;Dir=sensecoverage=99.5;identity=99.8;matches=411;mismatches=0;indels=1;unknowns=0;Target=FBgn0031040.1 3 71 +;locus=RLOC_00013406
Chr1	stalkie_big_nohaplotig	exon	164599480	164599766	100	-	.	Parent=FBgn0031040.1.mrna1;Target=FBgn0031040.1 126 412 +
Chr1	stalkie_big_nohaplotig	exon	164599819	164599942	99	-	.	Parent=FBgn0031040.1.mrna1;Target=FBgn0031040.1 1 125 +
Chr1	stalkie_big_nohaplotig	CDS	164599873	164599940	.	-	0	Parent=FBgn0031040.1.mrna1
Chr1	gffcl	locus	164605288	164606620	.	-	.	ID=RLOC_00013408;geneIDs=FBgn0031039.1.path1;transcripts=FBgn0031039.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164605288	164606620	.	-	.	ID=FBgn0031039.1.mrna1;geneID=FBgn0031039.1.path1;Name=FBgn0031039.1;Dir=sensecoverage=100.0;identity=99.7;matches=1098;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013408
Chr1	stalkie_big_nohaplotig	exon	164605288	164605514	100	-	.	Parent=FBgn0031039.1.mrna1;Target=FBgn0031039.1 875 1101 +
Chr1	stalkie_big_nohaplotig	exon	164605573	164605654	98	-	.	Parent=FBgn0031039.1.mrna1;Target=FBgn0031039.1 793 874 +
Chr1	stalkie_big_nohaplotig	exon	164605711	164606214	99	-	.	Parent=FBgn0031039.1.mrna1;Target=FBgn0031039.1 289 792 +
Chr1	stalkie_big_nohaplotig	exon	164606278	164606441	99	-	.	Parent=FBgn0031039.1.mrna1;Target=FBgn0031039.1 125 288 +
Chr1	stalkie_big_nohaplotig	exon	164606497	164606620	100	-	.	Parent=FBgn0031039.1.mrna1;Target=FBgn0031039.1 1 124 +
Chr1	stalkie_big_nohaplotig	CDS	164605288	164605514	.	-	2	Parent=FBgn0031039.1.mrna1;Target=FBgn0031039.1 875 1101 +
Chr1	stalkie_big_nohaplotig	CDS	164605573	164605654	.	-	0	Parent=FBgn0031039.1.mrna1;Target=FBgn0031039.1 793 874 +
Chr1	stalkie_big_nohaplotig	CDS	164605711	164606214	.	-	0	Parent=FBgn0031039.1.mrna1;Target=FBgn0031039.1 289 792 +
Chr1	stalkie_big_nohaplotig	CDS	164606278	164606441	.	-	2	Parent=FBgn0031039.1.mrna1;Target=FBgn0031039.1 125 288 +
Chr1	stalkie_big_nohaplotig	CDS	164606497	164606620	.	-	0	Parent=FBgn0031039.1.mrna1;Target=FBgn0031039.1 1 124 +
Chr1	gffcl	locus	164618117	164619875	.	+	.	ID=RLOC_00013409;geneIDs=FBgn0030329.1.path1;transcripts=FBgn0030329.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164618117	164619875	.	+	.	ID=FBgn0030329.1.mrna1;geneID=FBgn0030329.1.path1;Name=FBgn0030329.1;Dir=sensecoverage=100.0;identity=99.2;matches=1208;mismatches=10;indels=0;unknowns=0;locus=RLOC_00013409
Chr1	stalkie_big_nohaplotig	exon	164618117	164618310	97	+	.	Parent=FBgn0030329.1.mrna1;Target=FBgn0030329.1 1 194 +
Chr1	stalkie_big_nohaplotig	exon	164618652	164618907	99	+	.	Parent=FBgn0030329.1.mrna1;Target=FBgn0030329.1 195 450 +
Chr1	stalkie_big_nohaplotig	exon	164618972	164619124	98	+	.	Parent=FBgn0030329.1.mrna1;Target=FBgn0030329.1 451 603 +
Chr1	stalkie_big_nohaplotig	exon	164619201	164619556	99	+	.	Parent=FBgn0030329.1.mrna1;Target=FBgn0030329.1 604 959 +
Chr1	stalkie_big_nohaplotig	exon	164619617	164619875	99	+	.	Parent=FBgn0030329.1.mrna1;Target=FBgn0030329.1 960 1218 +
Chr1	stalkie_big_nohaplotig	CDS	164618144	164618310	.	+	0	Parent=FBgn0030329.1.mrna1;Target=FBgn0030329.1 28 194 +
Chr1	stalkie_big_nohaplotig	CDS	164618652	164618907	.	+	1	Parent=FBgn0030329.1.mrna1;Target=FBgn0030329.1 195 450 +
Chr1	stalkie_big_nohaplotig	CDS	164618972	164619124	.	+	0	Parent=FBgn0030329.1.mrna1;Target=FBgn0030329.1 451 603 +
Chr1	stalkie_big_nohaplotig	CDS	164619201	164619556	.	+	0	Parent=FBgn0030329.1.mrna1;Target=FBgn0030329.1 604 959 +
Chr1	stalkie_big_nohaplotig	CDS	164619617	164619875	.	+	1	Parent=FBgn0030329.1.mrna1;Target=FBgn0030329.1 960 1218 +
Chr1	gffcl	locus	164625260	164644045	.	+	.	ID=RLOC_00013411;geneIDs=FBgn0030331.2.path1;transcripts=FBgn0030331.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164625260	164644045	.	+	.	ID=FBgn0030331.2.mrna1;geneID=FBgn0030331.2.path1;Name=FBgn0030331.2;Dir=sensecoverage=100.0;identity=99.4;matches=1282;mismatches=7;indels=1;unknowns=0;locus=RLOC_00013411
Chr1	stalkie_big_nohaplotig	exon	164625260	164625308	100	+	.	Parent=FBgn0030331.2.mrna1;Target=FBgn0030331.2 1 49 +
Chr1	stalkie_big_nohaplotig	exon	164642624	164643148	98	+	.	Parent=FBgn0030331.2.mrna1;Target=FBgn0030331.2 50 574 +
Chr1	stalkie_big_nohaplotig	exon	164643206	164643629	100	+	.	Parent=FBgn0030331.2.mrna1;Target=FBgn0030331.2 575 998 +
Chr1	stalkie_big_nohaplotig	exon	164643694	164643920	99	+	.	Parent=FBgn0030331.2.mrna1;Target=FBgn0030331.2 999 1226 +
Chr1	stalkie_big_nohaplotig	exon	164643982	164644045	98	+	.	Parent=FBgn0030331.2.mrna1;Target=FBgn0030331.2 1227 1290 +
Chr1	stalkie_big_nohaplotig	CDS	164625260	164625308	.	+	0	Parent=FBgn0030331.2.mrna1;Target=FBgn0030331.2 1 49 +
Chr1	stalkie_big_nohaplotig	CDS	164642624	164643148	.	+	2	Parent=FBgn0030331.2.mrna1;Target=FBgn0030331.2 50 574 +
Chr1	stalkie_big_nohaplotig	CDS	164643206	164643629	.	+	2	Parent=FBgn0030331.2.mrna1;Target=FBgn0030331.2 575 998 +
Chr1	stalkie_big_nohaplotig	CDS	164643694	164643920	.	+	1	Parent=FBgn0030331.2.mrna1;Target=FBgn0030331.2 999 1226 +
Chr1	stalkie_big_nohaplotig	CDS	164643982	164644045	.	+	2	Parent=FBgn0030331.2.mrna1;Target=FBgn0030331.2 1227 1290 +
Chr1	gffcl	locus	164629274	164629977	.	-	.	ID=RLOC_00013412;geneIDs=FBgn0260812.1.path1;transcripts=FBgn0260812.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164629274	164629977	.	-	.	ID=FBgn0260812.1.mrna1;geneID=FBgn0260812.1.path1;Name=FBgn0260812.1;Dir=indeterminatecoverage=98.2;identity=99.9;matches=703;mismatches=1;indels=0;unknowns=0;Target=FBgn0260812.1 717 14 .;CDS_Target=FBgn0260812.1 717 16 .;locus=RLOC_00013412
Chr1	stalkie_big_nohaplotig	exon	164629274	164629977	99	-	.	Parent=FBgn0260812.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164629274	164629975	.	-	0	Parent=FBgn0260812.1.mrna1
Chr1	gffcl	locus	164637612	164637977	.	-	.	ID=RLOC_00013413;geneIDs=FBgn0085350.1.path1;transcripts=FBgn0085350.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164637612	164637977	.	-	.	ID=FBgn0085350.1.mrna1;geneID=FBgn0085350.1.path1;Name=FBgn0085350.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=365;mismatches=1;indels=0;unknowns=0;Target=FBgn0085350.1 366 1 .;locus=RLOC_00013413
Chr1	stalkie_big_nohaplotig	exon	164637612	164637977	99	-	.	Parent=FBgn0085350.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164637612	164637977	.	-	0	Parent=FBgn0085350.1.mrna1
Chr1	gffcl	locus	164640709	164640942	.	-	.	ID=RLOC_00013414;geneIDs=FBgn0259918.1.path1;transcripts=FBgn0259918.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164640709	164640942	.	-	.	ID=FBgn0259918.1.mrna1;geneID=FBgn0259918.1.path1;Name=FBgn0259918.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=233;mismatches=1;indels=0;unknowns=0;Target=FBgn0259918.1 234 1 .;locus=RLOC_00013414
Chr1	stalkie_big_nohaplotig	exon	164640709	164640942	99	-	.	Parent=FBgn0259918.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164640709	164640942	.	-	0	Parent=FBgn0259918.1.mrna1
Chr1	gffcl	locus	164642019	164642297	.	-	.	ID=RLOC_00013415;geneIDs=comp141978_c0_seq1.path1;transcripts=comp141978_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164642019	164642297	.	-	.	ID=comp141978_c0_seq1.mrna1;geneID=comp141978_c0_seq1.path1;Name=comp141978_c0_seq1;Dir=indeterminatecoverage=93.3;identity=98.2;matches=274;mismatches=5;indels=0;unknowns=0;Target=comp141978_c0_seq1 279 1 .;CDS_Target=comp141978_c0_seq1 277 2 .;locus=RLOC_00013415
Chr1	stalkie_big_nohaplotig	exon	164642019	164642297	98	-	.	Parent=comp141978_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164642021	164642296	.	-	0	Parent=comp141978_c0_seq1.mrna1
Chr1	gffcl	locus	164654001	164671927	.	+	.	ID=RLOC_00013416;geneIDs=comp151720_c0_seq1.path1;transcripts=comp151720_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164654001	164671927	.	+	.	ID=comp151720_c0_seq1.mrna1;geneID=comp151720_c0_seq1.path1;Name=comp151720_c0_seq1;Dir=antisensecoverage=96.1;identity=99.5;matches=558;mismatches=3;indels=0;unknowns=0;Target=comp151720_c0_seq1 436 582 .;locus=RLOC_00013416
Chr1	stalkie_big_nohaplotig	exon	164654001	164654459	99	+	.	Parent=comp151720_c0_seq1.mrna1;Target=comp151720_c0_seq1 126 584 -
Chr1	stalkie_big_nohaplotig	exon	164671826	164671927	99	+	.	Parent=comp151720_c0_seq1.mrna1;Target=comp151720_c0_seq1 24 125 -
Chr1	stalkie_big_nohaplotig	CDS	164654003	164654149	.	+	0	Parent=comp151720_c0_seq1.mrna1
Chr1	gffcl	locus	164688827	164689694	.	-	.	ID=RLOC_00013417;geneIDs=FBgn0030332.1.path1;transcripts=FBgn0030332.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164688827	164689694	.	-	.	ID=FBgn0030332.1.mrna1;geneID=FBgn0030332.1.path1;Name=FBgn0030332.1;Dir=sensecoverage=100.0;identity=99.5;matches=746;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013417
Chr1	stalkie_big_nohaplotig	exon	164688827	164688865	100	-	.	Parent=FBgn0030332.1.mrna1;Target=FBgn0030332.1 712 750 +
Chr1	stalkie_big_nohaplotig	exon	164688932	164689069	97	-	.	Parent=FBgn0030332.1.mrna1;Target=FBgn0030332.1 574 711 +
Chr1	stalkie_big_nohaplotig	exon	164689122	164689694	99	-	.	Parent=FBgn0030332.1.mrna1;Target=FBgn0030332.1 1 573 +
Chr1	stalkie_big_nohaplotig	CDS	164688827	164688865	.	-	0	Parent=FBgn0030332.1.mrna1;Target=FBgn0030332.1 712 750 +
Chr1	stalkie_big_nohaplotig	CDS	164688932	164689069	.	-	0	Parent=FBgn0030332.1.mrna1;Target=FBgn0030332.1 574 711 +
Chr1	stalkie_big_nohaplotig	CDS	164689122	164689694	.	-	0	Parent=FBgn0030332.1.mrna1;Target=FBgn0030332.1 1 573 +
Chr1	gffcl	locus	164694590	164695409	.	-	.	ID=RLOC_00013419;geneIDs=FBgn0030332.3.path1;transcripts=FBgn0030332.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164694590	164695409	.	-	.	ID=FBgn0030332.3.mrna1;geneID=FBgn0030332.3.path1;Name=FBgn0030332.3;Dir=sensecoverage=100.0;identity=99.9;matches=764;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013419
Chr1	stalkie_big_nohaplotig	exon	164694590	164694763	100	-	.	Parent=FBgn0030332.3.mrna1;Target=FBgn0030332.3 592 765 +
Chr1	stalkie_big_nohaplotig	exon	164694819	164695409	99	-	.	Parent=FBgn0030332.3.mrna1;Target=FBgn0030332.3 1 591 +
Chr1	stalkie_big_nohaplotig	CDS	164694590	164694763	.	-	0	Parent=FBgn0030332.3.mrna1;Target=FBgn0030332.3 592 765 +
Chr1	stalkie_big_nohaplotig	CDS	164694819	164695409	.	-	0	Parent=FBgn0030332.3.mrna1;Target=FBgn0030332.3 1 591 +
Chr1	gffcl	locus	164701767	164707419	.	+	.	ID=RLOC_00013421;geneIDs=FBgn0002577.1.path1,comp161763_c1_seq1.path1;transcripts=FBgn0002577.1.mrna1,comp161763_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164701767	164707010	.	+	.	ID=FBgn0002577.1.mrna1;geneID=FBgn0002577.1.path1;Name=FBgn0002577.1;Dir=sensecoverage=100.0;identity=99.6;matches=1933;mismatches=8;indels=0;unknowns=0;locus=RLOC_00013421
Chr1	stalkie_big_nohaplotig	exon	164701767	164701883	100	+	.	Parent=FBgn0002577.1.mrna1;Target=FBgn0002577.1 1 117 +
Chr1	stalkie_big_nohaplotig	exon	164703144	164703303	99	+	.	Parent=FBgn0002577.1.mrna1;Target=FBgn0002577.1 118 277 +
Chr1	stalkie_big_nohaplotig	exon	164703448	164703575	100	+	.	Parent=FBgn0002577.1.mrna1;Target=FBgn0002577.1 278 405 +
Chr1	stalkie_big_nohaplotig	exon	164704382	164704529	100	+	.	Parent=FBgn0002577.1.mrna1;Target=FBgn0002577.1 406 553 +
Chr1	stalkie_big_nohaplotig	exon	164704747	164704869	100	+	.	Parent=FBgn0002577.1.mrna1;Target=FBgn0002577.1 554 676 +
Chr1	stalkie_big_nohaplotig	exon	164705746	164707010	99	+	.	Parent=FBgn0002577.1.mrna1;Target=FBgn0002577.1 677 1941 +
Chr1	stalkie_big_nohaplotig	CDS	164701767	164701883	.	+	0	Parent=FBgn0002577.1.mrna1;Target=FBgn0002577.1 1 117 +
Chr1	stalkie_big_nohaplotig	CDS	164703144	164703303	.	+	0	Parent=FBgn0002577.1.mrna1;Target=FBgn0002577.1 118 277 +
Chr1	stalkie_big_nohaplotig	CDS	164703448	164703575	.	+	2	Parent=FBgn0002577.1.mrna1;Target=FBgn0002577.1 278 405 +
Chr1	stalkie_big_nohaplotig	CDS	164704382	164704529	.	+	0	Parent=FBgn0002577.1.mrna1;Target=FBgn0002577.1 406 553 +
Chr1	stalkie_big_nohaplotig	CDS	164704747	164704869	.	+	2	Parent=FBgn0002577.1.mrna1;Target=FBgn0002577.1 554 676 +
Chr1	stalkie_big_nohaplotig	CDS	164705746	164707010	.	+	2	Parent=FBgn0002577.1.mrna1;Target=FBgn0002577.1 677 1941 +
Chr1	stalkie_big_nohaplotig	mRNA	164701882	164707419	.	+	.	ID=comp161763_c1_seq1.mrna1;geneID=comp161763_c1_seq1.path1;Name=comp161763_c1_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=2908;mismatches=10;indels=0;unknowns=0;locus=RLOC_00013421
Chr1	stalkie_big_nohaplotig	exon	164701882	164702566	99	+	.	Parent=comp161763_c1_seq1.mrna1;Target=comp161763_c1_seq1 1 685 +
Chr1	stalkie_big_nohaplotig	exon	164703144	164703303	99	+	.	Parent=comp161763_c1_seq1.mrna1;Target=comp161763_c1_seq1 686 845 +
Chr1	stalkie_big_nohaplotig	exon	164703448	164703575	100	+	.	Parent=comp161763_c1_seq1.mrna1;Target=comp161763_c1_seq1 846 973 +
Chr1	stalkie_big_nohaplotig	exon	164704382	164704529	100	+	.	Parent=comp161763_c1_seq1.mrna1;Target=comp161763_c1_seq1 974 1121 +
Chr1	stalkie_big_nohaplotig	exon	164704747	164704869	100	+	.	Parent=comp161763_c1_seq1.mrna1;Target=comp161763_c1_seq1 1122 1244 +
Chr1	stalkie_big_nohaplotig	exon	164705746	164707419	99	+	.	Parent=comp161763_c1_seq1.mrna1;Target=comp161763_c1_seq1 1245 2918 +
Chr1	stalkie_big_nohaplotig	CDS	164703204	164703303	.	+	0	Parent=comp161763_c1_seq1.mrna1;Target=comp161763_c1_seq1 746 845 +
Chr1	stalkie_big_nohaplotig	CDS	164703448	164703575	.	+	2	Parent=comp161763_c1_seq1.mrna1;Target=comp161763_c1_seq1 846 973 +
Chr1	stalkie_big_nohaplotig	CDS	164704382	164704529	.	+	0	Parent=comp161763_c1_seq1.mrna1;Target=comp161763_c1_seq1 974 1121 +
Chr1	stalkie_big_nohaplotig	CDS	164704747	164704869	.	+	2	Parent=comp161763_c1_seq1.mrna1;Target=comp161763_c1_seq1 1122 1244 +
Chr1	stalkie_big_nohaplotig	CDS	164705746	164707013	.	+	2	Parent=comp161763_c1_seq1.mrna1;Target=comp161763_c1_seq1 1245 2512 +
Chr1	gffcl	locus	164705045	164705566	.	+	.	ID=RLOC_00013422;geneIDs=comp147266_c0_seq1.path1;transcripts=comp147266_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164705045	164705566	.	+	.	ID=comp147266_c0_seq1.mrna1;geneID=comp147266_c0_seq1.path1;Name=comp147266_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.0;matches=517;mismatches=5;indels=0;unknowns=0;Target=comp147266_c0_seq1 522 1 .;CDS_Target=comp147266_c0_seq1 514 350 .;locus=RLOC_00013422
Chr1	stalkie_big_nohaplotig	exon	164705045	164705566	99	+	.	Parent=comp147266_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164705394	164705558	.	+	0	Parent=comp147266_c0_seq1.mrna1
Chr1	gffcl	locus	164709069	164710547	.	+	.	ID=RLOC_00013423;geneIDs=FBgn0004957.1.path1;transcripts=FBgn0004957.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164709069	164710547	.	+	.	ID=FBgn0004957.1.mrna1;geneID=FBgn0004957.1.path1;Name=FBgn0004957.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1473;mismatches=6;indels=0;unknowns=0;Target=FBgn0004957.1 1479 1 .;locus=RLOC_00013423
Chr1	stalkie_big_nohaplotig	exon	164709069	164710547	99	+	.	Parent=FBgn0004957.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164709069	164710547	.	+	0	Parent=FBgn0004957.1.mrna1
Chr1	gffcl	locus	164712010	164712702	.	+	.	ID=RLOC_00013424;geneIDs=FBgn0030522.1.path1;transcripts=FBgn0030522.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164712010	164712702	.	+	.	ID=FBgn0030522.1.mrna1;geneID=FBgn0030522.1.path1;Name=FBgn0030522.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=690;mismatches=3;indels=0;unknowns=0;Target=FBgn0030522.1 693 1 .;locus=RLOC_00013424
Chr1	stalkie_big_nohaplotig	exon	164712010	164712702	99	+	.	Parent=FBgn0030522.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164712010	164712702	.	+	0	Parent=FBgn0030522.1.mrna1
Chr1	gffcl	locus	164712883	164714348	.	-	.	ID=RLOC_00013425;geneIDs=FBgn0030521.1.path1;transcripts=FBgn0030521.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164712883	164714348	.	-	.	ID=FBgn0030521.1.mrna1;geneID=FBgn0030521.1.path1;Name=FBgn0030521.1;Dir=sensecoverage=100.0;identity=99.6;matches=1049;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013425
Chr1	stalkie_big_nohaplotig	exon	164712883	164713347	100	-	.	Parent=FBgn0030521.1.mrna1;Target=FBgn0030521.1 589 1053 +
Chr1	stalkie_big_nohaplotig	exon	164713406	164713441	100	-	.	Parent=FBgn0030521.1.mrna1;Target=FBgn0030521.1 553 588 +
Chr1	stalkie_big_nohaplotig	exon	164713496	164713627	100	-	.	Parent=FBgn0030521.1.mrna1;Target=FBgn0030521.1 421 552 +
Chr1	stalkie_big_nohaplotig	exon	164713874	164714137	99	-	.	Parent=FBgn0030521.1.mrna1;Target=FBgn0030521.1 157 420 +
Chr1	stalkie_big_nohaplotig	exon	164714193	164714348	98	-	.	Parent=FBgn0030521.1.mrna1;Target=FBgn0030521.1 1 156 +
Chr1	stalkie_big_nohaplotig	CDS	164712883	164713347	.	-	0	Parent=FBgn0030521.1.mrna1;Target=FBgn0030521.1 589 1053 +
Chr1	stalkie_big_nohaplotig	CDS	164713406	164713441	.	-	0	Parent=FBgn0030521.1.mrna1;Target=FBgn0030521.1 553 588 +
Chr1	stalkie_big_nohaplotig	CDS	164713496	164713627	.	-	0	Parent=FBgn0030521.1.mrna1;Target=FBgn0030521.1 421 552 +
Chr1	stalkie_big_nohaplotig	CDS	164713874	164714137	.	-	0	Parent=FBgn0030521.1.mrna1;Target=FBgn0030521.1 157 420 +
Chr1	stalkie_big_nohaplotig	CDS	164714193	164714318	.	-	0	Parent=FBgn0030521.1.mrna1;Target=FBgn0030521.1 31 156 +
Chr1	gffcl	locus	164715579	164716873	.	+	.	ID=RLOC_00013426;geneIDs=FBgn0031106.1.path1;transcripts=FBgn0031106.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164715579	164716873	.	+	.	ID=FBgn0031106.1.mrna1;geneID=FBgn0031106.1.path1;Name=FBgn0031106.1;Dir=sensecoverage=100.0;identity=99.2;matches=1045;mismatches=8;indels=0;unknowns=0;locus=RLOC_00013426
Chr1	stalkie_big_nohaplotig	exon	164715579	164715668	100	+	.	Parent=FBgn0031106.1.mrna1;Target=FBgn0031106.1 1 90 +
Chr1	stalkie_big_nohaplotig	exon	164715841	164715974	100	+	.	Parent=FBgn0031106.1.mrna1;Target=FBgn0031106.1 91 224 +
Chr1	stalkie_big_nohaplotig	exon	164716045	164716873	99	+	.	Parent=FBgn0031106.1.mrna1;Target=FBgn0031106.1 225 1053 +
Chr1	stalkie_big_nohaplotig	CDS	164715579	164715668	.	+	0	Parent=FBgn0031106.1.mrna1;Target=FBgn0031106.1 1 90 +
Chr1	stalkie_big_nohaplotig	CDS	164715841	164715974	.	+	0	Parent=FBgn0031106.1.mrna1;Target=FBgn0031106.1 91 224 +
Chr1	stalkie_big_nohaplotig	CDS	164716045	164716873	.	+	1	Parent=FBgn0031106.1.mrna1;Target=FBgn0031106.1 225 1053 +
Chr1	gffcl	locus	164716977	164717793	.	-	.	ID=RLOC_00013427;geneIDs=FBgn0027334.1.path1;transcripts=FBgn0027334.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164716977	164717793	.	-	.	ID=FBgn0027334.1.mrna1;geneID=FBgn0027334.1.path1;Name=FBgn0027334.1;Dir=sensecoverage=100.0;identity=99.0;matches=692;mismatches=7;indels=0;unknowns=0;locus=RLOC_00013427
Chr1	stalkie_big_nohaplotig	exon	164716977	164717387	98	-	.	Parent=FBgn0027334.1.mrna1;Target=FBgn0027334.1 289 699 +
Chr1	stalkie_big_nohaplotig	exon	164717448	164717541	100	-	.	Parent=FBgn0027334.1.mrna1;Target=FBgn0027334.1 195 288 +
Chr1	stalkie_big_nohaplotig	exon	164717600	164717793	98	-	.	Parent=FBgn0027334.1.mrna1;Target=FBgn0027334.1 1 194 +
Chr1	stalkie_big_nohaplotig	CDS	164716977	164717387	.	-	0	Parent=FBgn0027334.1.mrna1;Target=FBgn0027334.1 289 699 +
Chr1	stalkie_big_nohaplotig	CDS	164717448	164717541	.	-	1	Parent=FBgn0027334.1.mrna1;Target=FBgn0027334.1 195 288 +
Chr1	stalkie_big_nohaplotig	CDS	164717600	164717793	.	-	0	Parent=FBgn0027334.1.mrna1;Target=FBgn0027334.1 1 194 +
Chr1	gffcl	locus	164718521	164719987	.	+	.	ID=RLOC_00013428;geneIDs=FBgn0028292.1.path1;transcripts=FBgn0028292.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164718521	164719987	.	+	.	ID=FBgn0028292.1.mrna1;geneID=FBgn0028292.1.path1;Name=FBgn0028292.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1460;mismatches=6;indels=0;unknowns=1;Target=FBgn0028292.1 1467 1 .;locus=RLOC_00013428
Chr1	stalkie_big_nohaplotig	exon	164718521	164719987	99	+	.	Parent=FBgn0028292.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164718521	164719987	.	+	0	Parent=FBgn0028292.1.mrna1
Chr1	gffcl	locus	164721317	164726260	.	-	.	ID=RLOC_00013429;geneIDs=FBgn0052703.1.path1;transcripts=FBgn0052703.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164721317	164726260	.	-	.	ID=FBgn0052703.1.mrna1;geneID=FBgn0052703.1.path1;Name=FBgn0052703.1;Dir=sensecoverage=99.9;identity=99.2;matches=2524;mismatches=21;indels=0;unknowns=0;locus=RLOC_00013429
Chr1	stalkie_big_nohaplotig	exon	164721317	164722674	98	-	.	Parent=FBgn0052703.1.mrna1;Target=FBgn0052703.1 1188 2545 +
Chr1	stalkie_big_nohaplotig	exon	164722726	164722911	99	-	.	Parent=FBgn0052703.1.mrna1;Target=FBgn0052703.1 1002 1187 +
Chr1	stalkie_big_nohaplotig	exon	164723754	164723885	100	-	.	Parent=FBgn0052703.1.mrna1;Target=FBgn0052703.1 870 1001 +
Chr1	stalkie_big_nohaplotig	exon	164723943	164724046	99	-	.	Parent=FBgn0052703.1.mrna1;Target=FBgn0052703.1 766 869 +
Chr1	stalkie_big_nohaplotig	exon	164724119	164724215	100	-	.	Parent=FBgn0052703.1.mrna1;Target=FBgn0052703.1 669 765 +
Chr1	stalkie_big_nohaplotig	exon	164724278	164724439	100	-	.	Parent=FBgn0052703.1.mrna1;Target=FBgn0052703.1 507 668 +
Chr1	stalkie_big_nohaplotig	exon	164724507	164724713	99	-	.	Parent=FBgn0052703.1.mrna1;Target=FBgn0052703.1 300 506 +
Chr1	stalkie_big_nohaplotig	exon	164724791	164724981	98	-	.	Parent=FBgn0052703.1.mrna1;Target=FBgn0052703.1 109 299 +
Chr1	stalkie_big_nohaplotig	exon	164726153	164726260	99	-	.	Parent=FBgn0052703.1.mrna1;Target=FBgn0052703.1 1 108 +
Chr1	stalkie_big_nohaplotig	CDS	164721318	164722674	.	-	1	Parent=FBgn0052703.1.mrna1;Target=FBgn0052703.1 1188 2544 +
Chr1	stalkie_big_nohaplotig	CDS	164722726	164722911	.	-	1	Parent=FBgn0052703.1.mrna1;Target=FBgn0052703.1 1002 1187 +
Chr1	stalkie_big_nohaplotig	CDS	164723754	164723885	.	-	1	Parent=FBgn0052703.1.mrna1;Target=FBgn0052703.1 870 1001 +
Chr1	stalkie_big_nohaplotig	CDS	164723943	164724046	.	-	0	Parent=FBgn0052703.1.mrna1;Target=FBgn0052703.1 766 869 +
Chr1	stalkie_big_nohaplotig	CDS	164724119	164724215	.	-	1	Parent=FBgn0052703.1.mrna1;Target=FBgn0052703.1 669 765 +
Chr1	stalkie_big_nohaplotig	CDS	164724278	164724439	.	-	1	Parent=FBgn0052703.1.mrna1;Target=FBgn0052703.1 507 668 +
Chr1	stalkie_big_nohaplotig	CDS	164724507	164724713	.	-	1	Parent=FBgn0052703.1.mrna1;Target=FBgn0052703.1 300 506 +
Chr1	stalkie_big_nohaplotig	CDS	164724791	164724981	.	-	0	Parent=FBgn0052703.1.mrna1;Target=FBgn0052703.1 109 299 +
Chr1	stalkie_big_nohaplotig	CDS	164726153	164726260	.	-	0	Parent=FBgn0052703.1.mrna1;Target=FBgn0052703.1 1 108 +
Chr1	gffcl	locus	164729706	164764750	.	+	.	ID=RLOC_00013430;geneIDs=FBgn0031150.1.path1,comp160779_c1_seq1.path1;transcripts=comp160779_c1_seq1.mrna1,FBgn0031150.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164729706	164764750	.	+	.	ID=comp160779_c1_seq1.mrna1;geneID=comp160779_c1_seq1.path1;Name=comp160779_c1_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=2140;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013430
Chr1	stalkie_big_nohaplotig	exon	164729706	164730052	99	+	.	Parent=comp160779_c1_seq1.mrna1;Target=comp160779_c1_seq1 1 347 +
Chr1	stalkie_big_nohaplotig	exon	164734133	164734678	100	+	.	Parent=comp160779_c1_seq1.mrna1;Target=comp160779_c1_seq1 348 893 +
Chr1	stalkie_big_nohaplotig	exon	164734744	164735039	100	+	.	Parent=comp160779_c1_seq1.mrna1;Target=comp160779_c1_seq1 894 1189 +
Chr1	stalkie_big_nohaplotig	exon	164757182	164757339	100	+	.	Parent=comp160779_c1_seq1.mrna1;Target=comp160779_c1_seq1 1190 1347 +
Chr1	stalkie_big_nohaplotig	exon	164757421	164757523	100	+	.	Parent=comp160779_c1_seq1.mrna1;Target=comp160779_c1_seq1 1348 1450 +
Chr1	stalkie_big_nohaplotig	exon	164757588	164757737	99	+	.	Parent=comp160779_c1_seq1.mrna1;Target=comp160779_c1_seq1 1451 1600 +
Chr1	stalkie_big_nohaplotig	exon	164759079	164759214	100	+	.	Parent=comp160779_c1_seq1.mrna1;Target=comp160779_c1_seq1 1601 1736 +
Chr1	stalkie_big_nohaplotig	exon	164763853	164763885	100	+	.	Parent=comp160779_c1_seq1.mrna1;Target=comp160779_c1_seq1 1737 1769 +
Chr1	stalkie_big_nohaplotig	exon	164764378	164764750	100	+	.	Parent=comp160779_c1_seq1.mrna1;Target=comp160779_c1_seq1 1770 2142 +
Chr1	stalkie_big_nohaplotig	CDS	164734336	164734678	.	+	0	Parent=comp160779_c1_seq1.mrna1;Target=comp160779_c1_seq1 551 893 +
Chr1	stalkie_big_nohaplotig	CDS	164734744	164735039	.	+	2	Parent=comp160779_c1_seq1.mrna1;Target=comp160779_c1_seq1 894 1189 +
Chr1	stalkie_big_nohaplotig	CDS	164757182	164757339	.	+	0	Parent=comp160779_c1_seq1.mrna1;Target=comp160779_c1_seq1 1190 1347 +
Chr1	stalkie_big_nohaplotig	CDS	164757421	164757523	.	+	1	Parent=comp160779_c1_seq1.mrna1;Target=comp160779_c1_seq1 1348 1450 +
Chr1	stalkie_big_nohaplotig	CDS	164757588	164757737	.	+	0	Parent=comp160779_c1_seq1.mrna1;Target=comp160779_c1_seq1 1451 1600 +
Chr1	stalkie_big_nohaplotig	CDS	164759079	164759214	.	+	0	Parent=comp160779_c1_seq1.mrna1;Target=comp160779_c1_seq1 1601 1736 +
Chr1	stalkie_big_nohaplotig	CDS	164763853	164763885	.	+	2	Parent=comp160779_c1_seq1.mrna1;Target=comp160779_c1_seq1 1737 1769 +
Chr1	stalkie_big_nohaplotig	CDS	164764378	164764394	.	+	2	Parent=comp160779_c1_seq1.mrna1;Target=comp160779_c1_seq1 1770 1786 +
Chr1	stalkie_big_nohaplotig	mRNA	164734195	164759837	.	+	.	ID=FBgn0031150.1.mrna1;geneID=FBgn0031150.1.path1;Name=FBgn0031150.1;Dir=sensecoverage=100.0;identity=99.9;matches=1478;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013430
Chr1	stalkie_big_nohaplotig	exon	164734195	164734678	100	+	.	Parent=FBgn0031150.1.mrna1;Target=FBgn0031150.1 1 484 +
Chr1	stalkie_big_nohaplotig	exon	164734744	164735039	100	+	.	Parent=FBgn0031150.1.mrna1;Target=FBgn0031150.1 485 780 +
Chr1	stalkie_big_nohaplotig	exon	164757182	164757339	100	+	.	Parent=FBgn0031150.1.mrna1;Target=FBgn0031150.1 781 938 +
Chr1	stalkie_big_nohaplotig	exon	164757421	164757523	100	+	.	Parent=FBgn0031150.1.mrna1;Target=FBgn0031150.1 939 1041 +
Chr1	stalkie_big_nohaplotig	exon	164757588	164757737	99	+	.	Parent=FBgn0031150.1.mrna1;Target=FBgn0031150.1 1042 1191 +
Chr1	stalkie_big_nohaplotig	exon	164759079	164759214	100	+	.	Parent=FBgn0031150.1.mrna1;Target=FBgn0031150.1 1192 1327 +
Chr1	stalkie_big_nohaplotig	exon	164759686	164759837	100	+	.	Parent=FBgn0031150.1.mrna1;Target=FBgn0031150.1 1328 1479 +
Chr1	stalkie_big_nohaplotig	CDS	164734195	164734678	.	+	0	Parent=FBgn0031150.1.mrna1;Target=FBgn0031150.1 1 484 +
Chr1	stalkie_big_nohaplotig	CDS	164734744	164735039	.	+	2	Parent=FBgn0031150.1.mrna1;Target=FBgn0031150.1 485 780 +
Chr1	stalkie_big_nohaplotig	CDS	164757182	164757339	.	+	0	Parent=FBgn0031150.1.mrna1;Target=FBgn0031150.1 781 938 +
Chr1	stalkie_big_nohaplotig	CDS	164757421	164757523	.	+	1	Parent=FBgn0031150.1.mrna1;Target=FBgn0031150.1 939 1041 +
Chr1	stalkie_big_nohaplotig	CDS	164757588	164757737	.	+	0	Parent=FBgn0031150.1.mrna1;Target=FBgn0031150.1 1042 1191 +
Chr1	stalkie_big_nohaplotig	CDS	164759079	164759214	.	+	0	Parent=FBgn0031150.1.mrna1;Target=FBgn0031150.1 1192 1327 +
Chr1	stalkie_big_nohaplotig	CDS	164759686	164759837	.	+	2	Parent=FBgn0031150.1.mrna1;Target=FBgn0031150.1 1328 1479 +
Chr1	gffcl	locus	164737650	164741916	.	-	.	ID=RLOC_00013431;geneIDs=FBgn0052512.1.path1;transcripts=FBgn0052512.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164737650	164741916	.	-	.	ID=FBgn0052512.1.mrna1;geneID=FBgn0052512.1.path1;Name=FBgn0052512.1;Dir=sensecoverage=100.0;identity=99.9;matches=1247;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013431
Chr1	stalkie_big_nohaplotig	exon	164737650	164738092	99	-	.	Parent=FBgn0052512.1.mrna1;Target=FBgn0052512.1 806 1248 +
Chr1	stalkie_big_nohaplotig	exon	164738316	164738560	100	-	.	Parent=FBgn0052512.1.mrna1;Target=FBgn0052512.1 561 805 +
Chr1	stalkie_big_nohaplotig	exon	164741357	164741916	100	-	.	Parent=FBgn0052512.1.mrna1;Target=FBgn0052512.1 1 560 +
Chr1	stalkie_big_nohaplotig	CDS	164737650	164738092	.	-	2	Parent=FBgn0052512.1.mrna1;Target=FBgn0052512.1 806 1248 +
Chr1	stalkie_big_nohaplotig	CDS	164738316	164738560	.	-	1	Parent=FBgn0052512.1.mrna1;Target=FBgn0052512.1 561 805 +
Chr1	stalkie_big_nohaplotig	CDS	164741357	164741916	.	-	0	Parent=FBgn0052512.1.mrna1;Target=FBgn0052512.1 1 560 +
Chr1	gffcl	locus	164764984	164766753	.	+	.	ID=RLOC_00013432;geneIDs=comp161018_c0_seq1.path1;transcripts=comp161018_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164764984	164766753	.	+	.	ID=comp161018_c0_seq1.mrna1;geneID=comp161018_c0_seq1.path1;Name=comp161018_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.5;matches=1762;mismatches=6;indels=3;unknowns=0;Target=comp161018_c0_seq1 1778 10 .;CDS_Target=comp161018_c0_seq1 1274 1080 .;locus=RLOC_00013432
Chr1	stalkie_big_nohaplotig	exon	164764984	164766753	99	+	.	Parent=comp161018_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164766055	164766248	.	+	0	Parent=comp161018_c0_seq1.mrna1
Chr1	gffcl	locus	164767006	164767947	.	-	.	ID=RLOC_00013433;geneIDs=comp149019_c0_seq1.path1;transcripts=comp149019_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164767006	164767947	.	-	.	ID=comp149019_c0_seq1.mrna1;geneID=comp149019_c0_seq1.path1;Name=comp149019_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=941;mismatches=1;indels=3;unknowns=0;Target=comp149019_c0_seq1 945 1 .;CDS_Target=comp149019_c0_seq1 700 545 .;locus=RLOC_00013433
Chr1	stalkie_big_nohaplotig	exon	164767006	164767947	99	-	.	Parent=comp149019_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164767251	164767403	.	-	0	Parent=comp149019_c0_seq1.mrna1
Chr1	gffcl	locus	164768132	164769423	.	-	.	ID=RLOC_00013434;geneIDs=comp154760_c0_seq1.path1;transcripts=comp154760_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164768132	164769423	.	-	.	ID=comp154760_c0_seq1.mrna1;geneID=comp154760_c0_seq1.path1;Name=comp154760_c0_seq1;Dir=sensecoverage=98.6;identity=99.8;matches=1195;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013434
Chr1	stalkie_big_nohaplotig	exon	164768132	164769074	99	-	.	Parent=comp154760_c0_seq1.mrna1;Target=comp154760_c0_seq1 272 1214 +
Chr1	stalkie_big_nohaplotig	exon	164769170	164769423	100	-	.	Parent=comp154760_c0_seq1.mrna1;Target=comp154760_c0_seq1 18 271 +
Chr1	stalkie_big_nohaplotig	CDS	164768575	164769074	.	-	2	Parent=comp154760_c0_seq1.mrna1;Target=comp154760_c0_seq1 272 771 +
Chr1	stalkie_big_nohaplotig	CDS	164769170	164769314	.	-	0	Parent=comp154760_c0_seq1.mrna1;Target=comp154760_c0_seq1 127 271 +
Chr1	gffcl	locus	164770135	164771169	.	-	.	ID=RLOC_00013435;geneIDs=comp134892_c0_seq1.path1;transcripts=comp134892_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164770135	164771169	.	-	.	ID=comp134892_c0_seq1.mrna1;geneID=comp134892_c0_seq1.path1;Name=comp134892_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=976;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013435
Chr1	stalkie_big_nohaplotig	exon	164770135	164770912	99	-	.	Parent=comp134892_c0_seq1.mrna1;Target=comp134892_c0_seq1 1 778 -
Chr1	stalkie_big_nohaplotig	exon	164770970	164771169	100	-	.	Parent=comp134892_c0_seq1.mrna1;Target=comp134892_c0_seq1 779 978 -
Chr1	stalkie_big_nohaplotig	CDS	164770388	164770912	.	-	0	Parent=comp134892_c0_seq1.mrna1;Target=comp134892_c0_seq1 254 778 .
Chr1	stalkie_big_nohaplotig	CDS	164770970	164771026	.	-	0	Parent=comp134892_c0_seq1.mrna1;Target=comp134892_c0_seq1 779 835 .
Chr1	gffcl	locus	164771433	164772175	.	+	.	ID=RLOC_00013436;geneIDs=FBgn0029833.1.path1;transcripts=FBgn0029833.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164771433	164772175	.	+	.	ID=FBgn0029833.1.mrna1;geneID=FBgn0029833.1.path1;Name=FBgn0029833.1;Dir=sensecoverage=100.0;identity=100.0;matches=564;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013436
Chr1	stalkie_big_nohaplotig	exon	164771433	164771461	100	+	.	Parent=FBgn0029833.1.mrna1;Target=FBgn0029833.1 1 29 +
Chr1	stalkie_big_nohaplotig	exon	164771527	164771679	100	+	.	Parent=FBgn0029833.1.mrna1;Target=FBgn0029833.1 30 182 +
Chr1	stalkie_big_nohaplotig	exon	164771730	164772032	100	+	.	Parent=FBgn0029833.1.mrna1;Target=FBgn0029833.1 183 485 +
Chr1	stalkie_big_nohaplotig	exon	164772097	164772175	100	+	.	Parent=FBgn0029833.1.mrna1;Target=FBgn0029833.1 486 564 +
Chr1	stalkie_big_nohaplotig	CDS	164771433	164771461	.	+	0	Parent=FBgn0029833.1.mrna1;Target=FBgn0029833.1 1 29 +
Chr1	stalkie_big_nohaplotig	CDS	164771527	164771679	.	+	1	Parent=FBgn0029833.1.mrna1;Target=FBgn0029833.1 30 182 +
Chr1	stalkie_big_nohaplotig	CDS	164771730	164772032	.	+	1	Parent=FBgn0029833.1.mrna1;Target=FBgn0029833.1 183 485 +
Chr1	stalkie_big_nohaplotig	CDS	164772097	164772175	.	+	1	Parent=FBgn0029833.1.mrna1;Target=FBgn0029833.1 486 564 +
Chr1	gffcl	locus	164782216	164784938	.	.	.	ID=RLOC_00013437;geneIDs=comp154762_c0_seq1.path1,comp161969_c1_seq1.path1;transcripts=comp161969_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164782882	164784938	.	+	.	ID=comp161969_c1_seq1.mrna1;geneID=comp161969_c1_seq1.path1;Name=comp161969_c1_seq1;Dir=indeterminatecoverage=98.0;identity=97.2;matches=2001;mismatches=28;indels=29;unknowns=0;Target=comp161969_c1_seq1 2071 42 .;CDS_Target=comp161969_c1_seq1 195 43 .;locus=RLOC_00013437
Chr1	stalkie_big_nohaplotig	exon	164782882	164784938	97	+	.	Parent=comp161969_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164782883	164783034	.	+	0	Parent=comp161969_c1_seq1.mrna1
Chr1	gffcl	locus	164797162	164810953	.	+	.	ID=RLOC_00013438;geneIDs=FBgn0261244.1.path1;transcripts=FBgn0261244.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164797162	164810953	.	+	.	ID=FBgn0261244.1.mrna1;geneID=FBgn0261244.1.path1;Name=FBgn0261244.1;Dir=sensecoverage=100.0;identity=99.7;matches=2749;mismatches=7;indels=1;unknowns=0;locus=RLOC_00013438
Chr1	stalkie_big_nohaplotig	exon	164797162	164797263	99	+	.	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 1 102 +
Chr1	stalkie_big_nohaplotig	exon	164801589	164801683	100	+	.	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 103 197 +
Chr1	stalkie_big_nohaplotig	exon	164801778	164801884	100	+	.	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 198 304 +
Chr1	stalkie_big_nohaplotig	exon	164801952	164802056	100	+	.	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 305 409 +
Chr1	stalkie_big_nohaplotig	exon	164802171	164802272	100	+	.	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 410 511 +
Chr1	stalkie_big_nohaplotig	exon	164802702	164802879	100	+	.	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 512 689 +
Chr1	stalkie_big_nohaplotig	exon	164802969	164803188	100	+	.	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 690 909 +
Chr1	stalkie_big_nohaplotig	exon	164803263	164803462	99	+	.	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 910 1109 +
Chr1	stalkie_big_nohaplotig	exon	164803542	164804039	99	+	.	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 1110 1607 +
Chr1	stalkie_big_nohaplotig	exon	164804098	164804124	100	+	.	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 1608 1634 +
Chr1	stalkie_big_nohaplotig	exon	164804747	164804990	99	+	.	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 1635 1878 +
Chr1	stalkie_big_nohaplotig	exon	164805054	164805181	98	+	.	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 1879 2006 +
Chr1	stalkie_big_nohaplotig	exon	164806515	164806538	100	+	.	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 2007 2030 +
Chr1	stalkie_big_nohaplotig	exon	164807000	164807132	100	+	.	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 2031 2163 +
Chr1	stalkie_big_nohaplotig	exon	164810361	164810953	99	+	.	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 2164 2757 +
Chr1	stalkie_big_nohaplotig	CDS	164797162	164797263	.	+	0	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 1 102 +
Chr1	stalkie_big_nohaplotig	CDS	164801589	164801683	.	+	0	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 103 197 +
Chr1	stalkie_big_nohaplotig	CDS	164801778	164801884	.	+	1	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 198 304 +
Chr1	stalkie_big_nohaplotig	CDS	164801952	164802056	.	+	2	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 305 409 +
Chr1	stalkie_big_nohaplotig	CDS	164802171	164802272	.	+	2	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 410 511 +
Chr1	stalkie_big_nohaplotig	CDS	164802702	164802879	.	+	2	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 512 689 +
Chr1	stalkie_big_nohaplotig	CDS	164802969	164803188	.	+	1	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 690 909 +
Chr1	stalkie_big_nohaplotig	CDS	164803263	164803462	.	+	0	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 910 1109 +
Chr1	stalkie_big_nohaplotig	CDS	164803542	164804039	.	+	1	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 1110 1607 +
Chr1	stalkie_big_nohaplotig	CDS	164804098	164804124	.	+	1	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 1608 1634 +
Chr1	stalkie_big_nohaplotig	CDS	164804747	164804990	.	+	1	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 1635 1878 +
Chr1	stalkie_big_nohaplotig	CDS	164805054	164805181	.	+	0	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 1879 2006 +
Chr1	stalkie_big_nohaplotig	CDS	164806515	164806538	.	+	1	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 2007 2030 +
Chr1	stalkie_big_nohaplotig	CDS	164807000	164807132	.	+	1	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 2031 2163 +
Chr1	stalkie_big_nohaplotig	CDS	164810361	164810953	.	+	0	Parent=FBgn0261244.1.mrna1;Target=FBgn0261244.1 2164 2757 +
Chr1	gffcl	locus	164813774	164814370	.	+	.	ID=RLOC_00013439;geneIDs=FBgn0030528.1.path1;transcripts=FBgn0030528.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164813774	164814370	.	+	.	ID=FBgn0030528.1.mrna1;geneID=FBgn0030528.1.path1;Name=FBgn0030528.1;Dir=sensecoverage=100.0;identity=99.1;matches=541;mismatches=4;indels=1;unknowns=0;Target=FBgn0030528.1 3 65 +;locus=RLOC_00013439
Chr1	stalkie_big_nohaplotig	exon	164813774	164813884	99	+	.	Parent=FBgn0030528.1.mrna1;Target=FBgn0030528.1 1 112 +
Chr1	stalkie_big_nohaplotig	exon	164813937	164814370	99	+	.	Parent=FBgn0030528.1.mrna1;Target=FBgn0030528.1 113 546 +
Chr1	stalkie_big_nohaplotig	CDS	164813776	164813837	.	+	0	Parent=FBgn0030528.1.mrna1
Chr1	gffcl	locus	164816644	164828074	.	-	.	ID=RLOC_00013440;geneIDs=ORF1123.path1,FBgn0030529.1.path1,comp152031_c0_seq1.path1;transcripts=FBgn0030529.1.mrna1,comp152031_c0_seq1.mrna1,ORF1123.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164816644	164828074	.	-	.	ID=FBgn0030529.1.mrna1;geneID=FBgn0030529.1.path1;Name=FBgn0030529.1;Dir=sensecoverage=100.0;identity=99.9;matches=791;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013440
Chr1	stalkie_big_nohaplotig	exon	164816644	164816718	100	-	.	Parent=FBgn0030529.1.mrna1;Target=FBgn0030529.1 718 792 +
Chr1	stalkie_big_nohaplotig	exon	164816789	164816899	100	-	.	Parent=FBgn0030529.1.mrna1;Target=FBgn0030529.1 607 717 +
Chr1	stalkie_big_nohaplotig	exon	164816960	164817202	99	-	.	Parent=FBgn0030529.1.mrna1;Target=FBgn0030529.1 364 606 +
Chr1	stalkie_big_nohaplotig	exon	164818003	164818167	100	-	.	Parent=FBgn0030529.1.mrna1;Target=FBgn0030529.1 199 363 +
Chr1	stalkie_big_nohaplotig	exon	164818234	164818335	100	-	.	Parent=FBgn0030529.1.mrna1;Target=FBgn0030529.1 97 198 +
Chr1	stalkie_big_nohaplotig	exon	164827979	164828074	100	-	.	Parent=FBgn0030529.1.mrna1;Target=FBgn0030529.1 1 96 +
Chr1	stalkie_big_nohaplotig	CDS	164816644	164816718	.	-	0	Parent=FBgn0030529.1.mrna1;Target=FBgn0030529.1 718 792 +
Chr1	stalkie_big_nohaplotig	CDS	164816789	164816899	.	-	0	Parent=FBgn0030529.1.mrna1;Target=FBgn0030529.1 607 717 +
Chr1	stalkie_big_nohaplotig	CDS	164816960	164817202	.	-	0	Parent=FBgn0030529.1.mrna1;Target=FBgn0030529.1 364 606 +
Chr1	stalkie_big_nohaplotig	CDS	164818003	164818167	.	-	0	Parent=FBgn0030529.1.mrna1;Target=FBgn0030529.1 199 363 +
Chr1	stalkie_big_nohaplotig	CDS	164818234	164818335	.	-	0	Parent=FBgn0030529.1.mrna1;Target=FBgn0030529.1 97 198 +
Chr1	stalkie_big_nohaplotig	CDS	164827979	164828074	.	-	0	Parent=FBgn0030529.1.mrna1;Target=FBgn0030529.1 1 96 +
Chr1	stalkie_big_nohaplotig	mRNA	164817182	164818025	.	-	.	ID=comp152031_c0_seq1.mrna1;geneID=comp152031_c0_seq1.path1;Name=comp152031_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=830;mismatches=14;indels=5;unknowns=0;Target=comp152031_c0_seq1 849 1 .;CDS_Target=comp152031_c0_seq1 535 386 .;locus=RLOC_00013440
Chr1	stalkie_big_nohaplotig	exon	164817182	164818025	97	-	.	Parent=comp152031_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164817491	164817640	.	-	0	Parent=comp152031_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164818599	164827999	.	-	.	ID=ORF1123.mrna1;geneID=ORF1123.path1;Name=ORF1123;Dir=sensecoverage=100.0;identity=99.3;matches=1216;mismatches=8;indels=0;unknowns=0;locus=RLOC_00013440
Chr1	stalkie_big_nohaplotig	exon	164818599	164819801	99	-	.	Parent=ORF1123.mrna1;Target=ORF1123 22 1224 +
Chr1	stalkie_big_nohaplotig	exon	164827979	164827999	100	-	.	Parent=ORF1123.mrna1;Target=ORF1123 1 21 +
Chr1	stalkie_big_nohaplotig	CDS	164818599	164819801	.	-	0	Parent=ORF1123.mrna1;Target=ORF1123 22 1224 +
Chr1	stalkie_big_nohaplotig	CDS	164827979	164827999	.	-	0	Parent=ORF1123.mrna1;Target=ORF1123 1 21 +
Chr1	gffcl	locus	164829189	164832092	.	+	.	ID=RLOC_00013441;geneIDs=FBgn0030625.1.path1;transcripts=FBgn0030625.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164829189	164832092	.	+	.	ID=FBgn0030625.1.mrna1;geneID=FBgn0030625.1.path1;Name=FBgn0030625.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=2892;mismatches=12;indels=0;unknowns=0;Target=FBgn0030625.1 2904 1 .;locus=RLOC_00013441
Chr1	stalkie_big_nohaplotig	exon	164829189	164832092	99	+	.	Parent=FBgn0030625.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164829189	164832092	.	+	0	Parent=FBgn0030625.1.mrna1
Chr1	gffcl	locus	164835965	164845310	.	+	.	ID=RLOC_00013442;geneIDs=comp149891_c2_seq1.path1;transcripts=comp149891_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164835965	164845310	.	+	.	ID=comp149891_c2_seq1.mrna1;geneID=comp149891_c2_seq1.path1;Name=comp149891_c2_seq1;Dir=antisensecoverage=100.0;identity=95.4;matches=330;mismatches=0;indels=16;unknowns=0;Target=comp149891_c2_seq1 155 337 .;locus=RLOC_00013442
Chr1	stalkie_big_nohaplotig	exon	164835965	164836203	93	+	.	Parent=comp149891_c2_seq1.mrna1;Target=comp149891_c2_seq1 100 338 -
Chr1	stalkie_big_nohaplotig	exon	164845212	164845310	100	+	.	Parent=comp149891_c2_seq1.mrna1;Target=comp149891_c2_seq1 1 99 -
Chr1	stalkie_big_nohaplotig	CDS	164835966	164836148	.	+	0	Parent=comp149891_c2_seq1.mrna1
Chr1	gffcl	locus	164846048	164864975	.	+	.	ID=RLOC_00013443;geneIDs=FBgn0261703.1.path1;transcripts=FBgn0261703.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164846048	164864975	.	+	.	ID=FBgn0261703.1.mrna1;geneID=FBgn0261703.1.path1;Name=FBgn0261703.1;Dir=sensecoverage=100.0;identity=99.6;matches=2656;mismatches=11;indels=0;unknowns=0;locus=RLOC_00013443
Chr1	stalkie_big_nohaplotig	exon	164846048	164846293	100	+	.	Parent=FBgn0261703.1.mrna1;Target=FBgn0261703.1 1 246 +
Chr1	stalkie_big_nohaplotig	exon	164852446	164853182	99	+	.	Parent=FBgn0261703.1.mrna1;Target=FBgn0261703.1 247 983 +
Chr1	stalkie_big_nohaplotig	exon	164860842	164861005	100	+	.	Parent=FBgn0261703.1.mrna1;Target=FBgn0261703.1 984 1147 +
Chr1	stalkie_big_nohaplotig	exon	164861082	164861227	100	+	.	Parent=FBgn0261703.1.mrna1;Target=FBgn0261703.1 1148 1293 +
Chr1	stalkie_big_nohaplotig	exon	164863398	164863600	99	+	.	Parent=FBgn0261703.1.mrna1;Target=FBgn0261703.1 1294 1496 +
Chr1	stalkie_big_nohaplotig	exon	164863675	164863867	100	+	.	Parent=FBgn0261703.1.mrna1;Target=FBgn0261703.1 1497 1689 +
Chr1	stalkie_big_nohaplotig	exon	164863939	164864170	100	+	.	Parent=FBgn0261703.1.mrna1;Target=FBgn0261703.1 1690 1921 +
Chr1	stalkie_big_nohaplotig	exon	164864230	164864975	98	+	.	Parent=FBgn0261703.1.mrna1;Target=FBgn0261703.1 1922 2667 +
Chr1	stalkie_big_nohaplotig	CDS	164846048	164846293	.	+	0	Parent=FBgn0261703.1.mrna1;Target=FBgn0261703.1 1 246 +
Chr1	stalkie_big_nohaplotig	CDS	164852446	164853182	.	+	0	Parent=FBgn0261703.1.mrna1;Target=FBgn0261703.1 247 983 +
Chr1	stalkie_big_nohaplotig	CDS	164860842	164861005	.	+	1	Parent=FBgn0261703.1.mrna1;Target=FBgn0261703.1 984 1147 +
Chr1	stalkie_big_nohaplotig	CDS	164861082	164861227	.	+	2	Parent=FBgn0261703.1.mrna1;Target=FBgn0261703.1 1148 1293 +
Chr1	stalkie_big_nohaplotig	CDS	164863398	164863600	.	+	0	Parent=FBgn0261703.1.mrna1;Target=FBgn0261703.1 1294 1496 +
Chr1	stalkie_big_nohaplotig	CDS	164863675	164863867	.	+	1	Parent=FBgn0261703.1.mrna1;Target=FBgn0261703.1 1497 1689 +
Chr1	stalkie_big_nohaplotig	CDS	164863939	164864170	.	+	0	Parent=FBgn0261703.1.mrna1;Target=FBgn0261703.1 1690 1921 +
Chr1	stalkie_big_nohaplotig	CDS	164864230	164864975	.	+	2	Parent=FBgn0261703.1.mrna1;Target=FBgn0261703.1 1922 2667 +
Chr1	gffcl	locus	164865555	164867062	.	+	.	ID=RLOC_00013444;geneIDs=comp153895_c0_seq1.path1;transcripts=comp153895_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164865555	164867062	.	+	.	ID=comp153895_c0_seq1.mrna1;geneID=comp153895_c0_seq1.path1;Name=comp153895_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1504;mismatches=3;indels=1;unknowns=0;Target=comp153895_c0_seq1 1507 1 .;CDS_Target=comp153895_c0_seq1 286 116 .;locus=RLOC_00013444
Chr1	stalkie_big_nohaplotig	exon	164865555	164867062	99	+	.	Parent=comp153895_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164865670	164865840	.	+	0	Parent=comp153895_c0_seq1.mrna1
Chr1	gffcl	locus	164868374	164870326	.	+	.	ID=RLOC_00013445;geneIDs=FBgn0039355.2.path1;transcripts=FBgn0039355.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164868374	164870326	.	+	.	ID=FBgn0039355.2.mrna1;geneID=FBgn0039355.2.path1;Name=FBgn0039355.2;Dir=sensecoverage=100.0;identity=99.3;matches=1645;mismatches=11;indels=0;unknowns=0;locus=RLOC_00013445
Chr1	stalkie_big_nohaplotig	exon	164868374	164868775	99	+	.	Parent=FBgn0039355.2.mrna1;Target=FBgn0039355.2 1 402 +
Chr1	stalkie_big_nohaplotig	exon	164868828	164868891	100	+	.	Parent=FBgn0039355.2.mrna1;Target=FBgn0039355.2 403 466 +
Chr1	stalkie_big_nohaplotig	exon	164868961	164869110	98	+	.	Parent=FBgn0039355.2.mrna1;Target=FBgn0039355.2 467 616 +
Chr1	stalkie_big_nohaplotig	exon	164869163	164869429	100	+	.	Parent=FBgn0039355.2.mrna1;Target=FBgn0039355.2 617 883 +
Chr1	stalkie_big_nohaplotig	exon	164869490	164870030	98	+	.	Parent=FBgn0039355.2.mrna1;Target=FBgn0039355.2 884 1424 +
Chr1	stalkie_big_nohaplotig	exon	164870095	164870326	99	+	.	Parent=FBgn0039355.2.mrna1;Target=FBgn0039355.2 1425 1656 +
Chr1	stalkie_big_nohaplotig	CDS	164868374	164868775	.	+	0	Parent=FBgn0039355.2.mrna1;Target=FBgn0039355.2 1 402 +
Chr1	stalkie_big_nohaplotig	CDS	164868828	164868891	.	+	0	Parent=FBgn0039355.2.mrna1;Target=FBgn0039355.2 403 466 +
Chr1	stalkie_big_nohaplotig	CDS	164868961	164869110	.	+	2	Parent=FBgn0039355.2.mrna1;Target=FBgn0039355.2 467 616 +
Chr1	stalkie_big_nohaplotig	CDS	164869163	164869429	.	+	2	Parent=FBgn0039355.2.mrna1;Target=FBgn0039355.2 617 883 +
Chr1	stalkie_big_nohaplotig	CDS	164869490	164870030	.	+	2	Parent=FBgn0039355.2.mrna1;Target=FBgn0039355.2 884 1424 +
Chr1	stalkie_big_nohaplotig	CDS	164870095	164870326	.	+	1	Parent=FBgn0039355.2.mrna1;Target=FBgn0039355.2 1425 1656 +
Chr1	gffcl	locus	164885417	164888954	.	-	.	ID=RLOC_00013446;geneIDs=FBgn0003996.1.path1;transcripts=FBgn0003996.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164885417	164888954	.	-	.	ID=FBgn0003996.1.mrna1;geneID=FBgn0003996.1.path1;Name=FBgn0003996.1;Dir=sensecoverage=100.0;identity=99.9;matches=2056;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013446
Chr1	stalkie_big_nohaplotig	exon	164885417	164886028	99	-	.	Parent=FBgn0003996.1.mrna1;Target=FBgn0003996.1 1447 2058 +
Chr1	stalkie_big_nohaplotig	exon	164886086	164886217	100	-	.	Parent=FBgn0003996.1.mrna1;Target=FBgn0003996.1 1315 1446 +
Chr1	stalkie_big_nohaplotig	exon	164886280	164886469	100	-	.	Parent=FBgn0003996.1.mrna1;Target=FBgn0003996.1 1125 1314 +
Chr1	stalkie_big_nohaplotig	exon	164886633	164886764	100	-	.	Parent=FBgn0003996.1.mrna1;Target=FBgn0003996.1 993 1124 +
Chr1	stalkie_big_nohaplotig	exon	164886819	164887473	99	-	.	Parent=FBgn0003996.1.mrna1;Target=FBgn0003996.1 338 992 +
Chr1	stalkie_big_nohaplotig	exon	164887528	164887762	100	-	.	Parent=FBgn0003996.1.mrna1;Target=FBgn0003996.1 103 337 +
Chr1	stalkie_big_nohaplotig	exon	164888853	164888954	100	-	.	Parent=FBgn0003996.1.mrna1;Target=FBgn0003996.1 1 102 +
Chr1	stalkie_big_nohaplotig	CDS	164885417	164886028	.	-	0	Parent=FBgn0003996.1.mrna1;Target=FBgn0003996.1 1447 2058 +
Chr1	stalkie_big_nohaplotig	CDS	164886086	164886217	.	-	0	Parent=FBgn0003996.1.mrna1;Target=FBgn0003996.1 1315 1446 +
Chr1	stalkie_big_nohaplotig	CDS	164886280	164886469	.	-	1	Parent=FBgn0003996.1.mrna1;Target=FBgn0003996.1 1125 1314 +
Chr1	stalkie_big_nohaplotig	CDS	164886633	164886764	.	-	1	Parent=FBgn0003996.1.mrna1;Target=FBgn0003996.1 993 1124 +
Chr1	stalkie_big_nohaplotig	CDS	164886819	164887473	.	-	2	Parent=FBgn0003996.1.mrna1;Target=FBgn0003996.1 338 992 +
Chr1	stalkie_big_nohaplotig	CDS	164887528	164887762	.	-	0	Parent=FBgn0003996.1.mrna1;Target=FBgn0003996.1 103 337 +
Chr1	stalkie_big_nohaplotig	CDS	164888853	164888954	.	-	0	Parent=FBgn0003996.1.mrna1;Target=FBgn0003996.1 1 102 +
Chr1	gffcl	locus	164925592	164927568	.	+	.	ID=RLOC_00013447;geneIDs=FBgn0025643.1.path1;transcripts=FBgn0025643.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164925592	164927568	.	+	.	ID=FBgn0025643.1.mrna1;geneID=FBgn0025643.1.path1;Name=FBgn0025643.1;Dir=sensecoverage=100.0;identity=99.7;matches=1825;mismatches=4;indels=2;unknowns=0;locus=RLOC_00013447
Chr1	stalkie_big_nohaplotig	exon	164925592	164925766	100	+	.	Parent=FBgn0025643.1.mrna1;Target=FBgn0025643.1 1 175 +
Chr1	stalkie_big_nohaplotig	exon	164925914	164927568	99	+	.	Parent=FBgn0025643.1.mrna1;Target=FBgn0025643.1 176 1830 +
Chr1	stalkie_big_nohaplotig	CDS	164925592	164925766	.	+	0	Parent=FBgn0025643.1.mrna1;Target=FBgn0025643.1 1 175 +
Chr1	stalkie_big_nohaplotig	CDS	164925914	164927568	.	+	2	Parent=FBgn0025643.1.mrna1;Target=FBgn0025643.1 176 1830 +
Chr1	gffcl	locus	164947189	164948364	.	+	.	ID=RLOC_00013448;geneIDs=ORF1438.path1;transcripts=ORF1438.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164947189	164948364	.	+	.	ID=ORF1438.mrna1;geneID=ORF1438.path1;Name=ORF1438;Dir=sensecoverage=100.0;identity=97.7;matches=1085;mismatches=7;indels=18;unknowns=0;locus=RLOC_00013448
Chr1	stalkie_big_nohaplotig	exon	164947189	164947258	100	+	.	Parent=ORF1438.mrna1;Target=ORF1438 1 70 +
Chr1	stalkie_big_nohaplotig	exon	164947337	164948364	97	+	.	Parent=ORF1438.mrna1;Target=ORF1438 71 1104 +
Chr1	stalkie_big_nohaplotig	CDS	164947189	164947258	.	+	0	Parent=ORF1438.mrna1;Target=ORF1438 1 70 +
Chr1	stalkie_big_nohaplotig	CDS	164947337	164948364	.	+	2	Parent=ORF1438.mrna1;Target=ORF1438 71 1104 +
Chr1	gffcl	locus	164957187	164962944	.	-	.	ID=RLOC_00013449;geneIDs=FBgn0003285.1.path1;transcripts=FBgn0003285.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164957187	164962944	.	-	.	ID=FBgn0003285.1.mrna1;geneID=FBgn0003285.1.path1;Name=FBgn0003285.1;Dir=sensecoverage=100.0;identity=100.0;matches=2304;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013449
Chr1	stalkie_big_nohaplotig	exon	164957187	164957860	100	-	.	Parent=FBgn0003285.1.mrna1;Target=FBgn0003285.1 1631 2304 +
Chr1	stalkie_big_nohaplotig	exon	164958020	164958440	100	-	.	Parent=FBgn0003285.1.mrna1;Target=FBgn0003285.1 1210 1630 +
Chr1	stalkie_big_nohaplotig	exon	164958692	164958819	100	-	.	Parent=FBgn0003285.1.mrna1;Target=FBgn0003285.1 1082 1209 +
Chr1	stalkie_big_nohaplotig	exon	164958883	164958985	100	-	.	Parent=FBgn0003285.1.mrna1;Target=FBgn0003285.1 979 1081 +
Chr1	stalkie_big_nohaplotig	exon	164960440	164960616	100	-	.	Parent=FBgn0003285.1.mrna1;Target=FBgn0003285.1 802 978 +
Chr1	stalkie_big_nohaplotig	exon	164961484	164961684	100	-	.	Parent=FBgn0003285.1.mrna1;Target=FBgn0003285.1 601 801 +
Chr1	stalkie_big_nohaplotig	exon	164962345	164962944	100	-	.	Parent=FBgn0003285.1.mrna1;Target=FBgn0003285.1 1 600 +
Chr1	stalkie_big_nohaplotig	CDS	164957187	164957860	.	-	2	Parent=FBgn0003285.1.mrna1;Target=FBgn0003285.1 1631 2304 +
Chr1	stalkie_big_nohaplotig	CDS	164958020	164958440	.	-	0	Parent=FBgn0003285.1.mrna1;Target=FBgn0003285.1 1210 1630 +
Chr1	stalkie_big_nohaplotig	CDS	164958692	164958819	.	-	2	Parent=FBgn0003285.1.mrna1;Target=FBgn0003285.1 1082 1209 +
Chr1	stalkie_big_nohaplotig	CDS	164958883	164958985	.	-	0	Parent=FBgn0003285.1.mrna1;Target=FBgn0003285.1 979 1081 +
Chr1	stalkie_big_nohaplotig	CDS	164960440	164960616	.	-	0	Parent=FBgn0003285.1.mrna1;Target=FBgn0003285.1 802 978 +
Chr1	stalkie_big_nohaplotig	CDS	164961484	164961684	.	-	0	Parent=FBgn0003285.1.mrna1;Target=FBgn0003285.1 601 801 +
Chr1	stalkie_big_nohaplotig	CDS	164962345	164962944	.	-	0	Parent=FBgn0003285.1.mrna1;Target=FBgn0003285.1 1 600 +
Chr1	gffcl	locus	164988702	164993708	.	+	.	ID=RLOC_00013450;geneIDs=FBgn0028369.1.path1;transcripts=FBgn0028369.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164988702	164993708	.	+	.	ID=FBgn0028369.1.mrna1;geneID=FBgn0028369.1.path1;Name=FBgn0028369.1;Dir=sensecoverage=100.0;identity=100.0;matches=2624;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013450
Chr1	stalkie_big_nohaplotig	exon	164988702	164989107	100	+	.	Parent=FBgn0028369.1.mrna1;Target=FBgn0028369.1 1 406 +
Chr1	stalkie_big_nohaplotig	exon	164989170	164989321	100	+	.	Parent=FBgn0028369.1.mrna1;Target=FBgn0028369.1 407 558 +
Chr1	stalkie_big_nohaplotig	exon	164991112	164991312	100	+	.	Parent=FBgn0028369.1.mrna1;Target=FBgn0028369.1 559 759 +
Chr1	stalkie_big_nohaplotig	exon	164991388	164991564	100	+	.	Parent=FBgn0028369.1.mrna1;Target=FBgn0028369.1 760 936 +
Chr1	stalkie_big_nohaplotig	exon	164991621	164991723	100	+	.	Parent=FBgn0028369.1.mrna1;Target=FBgn0028369.1 937 1039 +
Chr1	stalkie_big_nohaplotig	exon	164991879	164992006	100	+	.	Parent=FBgn0028369.1.mrna1;Target=FBgn0028369.1 1040 1167 +
Chr1	stalkie_big_nohaplotig	exon	164992066	164992492	100	+	.	Parent=FBgn0028369.1.mrna1;Target=FBgn0028369.1 1168 1594 +
Chr1	stalkie_big_nohaplotig	exon	164992548	164992869	100	+	.	Parent=FBgn0028369.1.mrna1;Target=FBgn0028369.1 1595 1916 +
Chr1	stalkie_big_nohaplotig	exon	164992929	164993221	100	+	.	Parent=FBgn0028369.1.mrna1;Target=FBgn0028369.1 1917 2209 +
Chr1	stalkie_big_nohaplotig	exon	164993293	164993708	99	+	.	Parent=FBgn0028369.1.mrna1;Target=FBgn0028369.1 2210 2625 +
Chr1	stalkie_big_nohaplotig	CDS	164988702	164989107	.	+	0	Parent=FBgn0028369.1.mrna1;Target=FBgn0028369.1 1 406 +
Chr1	stalkie_big_nohaplotig	CDS	164989170	164989321	.	+	2	Parent=FBgn0028369.1.mrna1;Target=FBgn0028369.1 407 558 +
Chr1	stalkie_big_nohaplotig	CDS	164991112	164991312	.	+	0	Parent=FBgn0028369.1.mrna1;Target=FBgn0028369.1 559 759 +
Chr1	stalkie_big_nohaplotig	CDS	164991388	164991564	.	+	0	Parent=FBgn0028369.1.mrna1;Target=FBgn0028369.1 760 936 +
Chr1	stalkie_big_nohaplotig	CDS	164991621	164991723	.	+	0	Parent=FBgn0028369.1.mrna1;Target=FBgn0028369.1 937 1039 +
Chr1	stalkie_big_nohaplotig	CDS	164991879	164992006	.	+	2	Parent=FBgn0028369.1.mrna1;Target=FBgn0028369.1 1040 1167 +
Chr1	stalkie_big_nohaplotig	CDS	164992066	164992492	.	+	0	Parent=FBgn0028369.1.mrna1;Target=FBgn0028369.1 1168 1594 +
Chr1	stalkie_big_nohaplotig	CDS	164992548	164992869	.	+	2	Parent=FBgn0028369.1.mrna1;Target=FBgn0028369.1 1595 1916 +
Chr1	stalkie_big_nohaplotig	CDS	164992929	164993221	.	+	1	Parent=FBgn0028369.1.mrna1;Target=FBgn0028369.1 1917 2209 +
Chr1	stalkie_big_nohaplotig	CDS	164993293	164993708	.	+	2	Parent=FBgn0028369.1.mrna1;Target=FBgn0028369.1 2210 2625 +
Chr1	gffcl	locus	164994079	164994775	.	-	.	ID=RLOC_00013451;geneIDs=comp133033_c0_seq1.path1;transcripts=comp133033_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164994079	164994775	.	-	.	ID=comp133033_c0_seq1.mrna1;geneID=comp133033_c0_seq1.path1;Name=comp133033_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=696;mismatches=1;indels=1;unknowns=0;Target=comp133033_c0_seq1 698 1 .;CDS_Target=comp133033_c0_seq1 618 526 .;locus=RLOC_00013451
Chr1	stalkie_big_nohaplotig	exon	164994079	164994775	99	-	.	Parent=comp133033_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	164994159	164994251	.	-	0	Parent=comp133033_c0_seq1.mrna1
Chr1	gffcl	locus	164995915	164996709	.	-	.	ID=RLOC_00013452;geneIDs=FBgn0035194.1.path1;transcripts=FBgn0035194.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164995915	164996709	.	-	.	ID=FBgn0035194.1.mrna1;geneID=FBgn0035194.1.path1;Name=FBgn0035194.1;Dir=sensecoverage=100.0;identity=99.4;matches=632;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013452
Chr1	stalkie_big_nohaplotig	exon	164995915	164996359	99	-	.	Parent=FBgn0035194.1.mrna1;Target=FBgn0035194.1 192 636 +
Chr1	stalkie_big_nohaplotig	exon	164996454	164996518	100	-	.	Parent=FBgn0035194.1.mrna1;Target=FBgn0035194.1 127 191 +
Chr1	stalkie_big_nohaplotig	exon	164996584	164996709	99	-	.	Parent=FBgn0035194.1.mrna1;Target=FBgn0035194.1 1 126 +
Chr1	stalkie_big_nohaplotig	CDS	164995915	164996359	.	-	1	Parent=FBgn0035194.1.mrna1;Target=FBgn0035194.1 192 636 +
Chr1	stalkie_big_nohaplotig	CDS	164996454	164996518	.	-	0	Parent=FBgn0035194.1.mrna1;Target=FBgn0035194.1 127 191 +
Chr1	stalkie_big_nohaplotig	CDS	164996584	164996709	.	-	0	Parent=FBgn0035194.1.mrna1;Target=FBgn0035194.1 1 126 +
Chr1	gffcl	locus	164998365	165017785	.	+	.	ID=RLOC_00013453;geneIDs=FBgn0004647.1.path1;transcripts=FBgn0004647.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	164998365	165017785	.	+	.	ID=FBgn0004647.1.mrna1;geneID=FBgn0004647.1.path1;Name=FBgn0004647.1;Dir=sensecoverage=100.0;identity=99.7;matches=7858;mismatches=26;indels=0;unknowns=0;locus=RLOC_00013453
Chr1	stalkie_big_nohaplotig	exon	164998365	164998479	100	+	.	Parent=FBgn0004647.1.mrna1;Target=FBgn0004647.1 1 115 +
Chr1	stalkie_big_nohaplotig	exon	165001566	165001641	100	+	.	Parent=FBgn0004647.1.mrna1;Target=FBgn0004647.1 116 191 +
Chr1	stalkie_big_nohaplotig	exon	165004718	165004986	100	+	.	Parent=FBgn0004647.1.mrna1;Target=FBgn0004647.1 192 460 +
Chr1	stalkie_big_nohaplotig	exon	165007346	165007550	99	+	.	Parent=FBgn0004647.1.mrna1;Target=FBgn0004647.1 461 665 +
Chr1	stalkie_big_nohaplotig	exon	165007702	165007835	99	+	.	Parent=FBgn0004647.1.mrna1;Target=FBgn0004647.1 666 799 +
Chr1	stalkie_big_nohaplotig	exon	165010514	165010676	100	+	.	Parent=FBgn0004647.1.mrna1;Target=FBgn0004647.1 800 962 +
Chr1	stalkie_big_nohaplotig	exon	165010734	165016653	99	+	.	Parent=FBgn0004647.1.mrna1;Target=FBgn0004647.1 963 6882 +
Chr1	stalkie_big_nohaplotig	exon	165016726	165017386	98	+	.	Parent=FBgn0004647.1.mrna1;Target=FBgn0004647.1 6883 7543 +
Chr1	stalkie_big_nohaplotig	exon	165017445	165017785	100	+	.	Parent=FBgn0004647.1.mrna1;Target=FBgn0004647.1 7544 7884 +
Chr1	stalkie_big_nohaplotig	CDS	164998365	164998479	.	+	0	Parent=FBgn0004647.1.mrna1;Target=FBgn0004647.1 1 115 +
Chr1	stalkie_big_nohaplotig	CDS	165001566	165001641	.	+	2	Parent=FBgn0004647.1.mrna1;Target=FBgn0004647.1 116 191 +
Chr1	stalkie_big_nohaplotig	CDS	165004718	165004986	.	+	1	Parent=FBgn0004647.1.mrna1;Target=FBgn0004647.1 192 460 +
Chr1	stalkie_big_nohaplotig	CDS	165007346	165007550	.	+	2	Parent=FBgn0004647.1.mrna1;Target=FBgn0004647.1 461 665 +
Chr1	stalkie_big_nohaplotig	CDS	165007702	165007835	.	+	1	Parent=FBgn0004647.1.mrna1;Target=FBgn0004647.1 666 799 +
Chr1	stalkie_big_nohaplotig	CDS	165010514	165010676	.	+	2	Parent=FBgn0004647.1.mrna1;Target=FBgn0004647.1 800 962 +
Chr1	stalkie_big_nohaplotig	CDS	165010734	165016653	.	+	1	Parent=FBgn0004647.1.mrna1;Target=FBgn0004647.1 963 6882 +
Chr1	stalkie_big_nohaplotig	CDS	165016726	165017386	.	+	0	Parent=FBgn0004647.1.mrna1;Target=FBgn0004647.1 6883 7543 +
Chr1	stalkie_big_nohaplotig	CDS	165017445	165017785	.	+	2	Parent=FBgn0004647.1.mrna1;Target=FBgn0004647.1 7544 7884 +
Chr1	gffcl	locus	165024237	165028522	.	.	.	ID=RLOC_00013454;geneIDs=FBgn0040384.1.path1,comp146826_c0_seq1.path1;transcripts=FBgn0040384.1.mrna1,comp146826_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165024237	165028522	.	+	.	ID=FBgn0040384.1.mrna1;geneID=FBgn0040384.1.path1;Name=FBgn0040384.1;Dir=sensecoverage=99.5;identity=99.8;matches=1004;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013454
Chr1	stalkie_big_nohaplotig	exon	165024237	165024338	100	+	.	Parent=FBgn0040384.1.mrna1;Target=FBgn0040384.1 1 102 +
Chr1	stalkie_big_nohaplotig	exon	165024511	165024629	100	+	.	Parent=FBgn0040384.1.mrna1;Target=FBgn0040384.1 103 221 +
Chr1	stalkie_big_nohaplotig	exon	165026150	165026270	99	+	.	Parent=FBgn0040384.1.mrna1;Target=FBgn0040384.1 222 342 +
Chr1	stalkie_big_nohaplotig	exon	165026983	165027122	100	+	.	Parent=FBgn0040384.1.mrna1;Target=FBgn0040384.1 343 482 +
Chr1	stalkie_big_nohaplotig	exon	165027863	165028080	99	+	.	Parent=FBgn0040384.1.mrna1;Target=FBgn0040384.1 483 700 +
Chr1	stalkie_big_nohaplotig	exon	165028160	165028386	100	+	.	Parent=FBgn0040384.1.mrna1;Target=FBgn0040384.1 701 927 +
Chr1	stalkie_big_nohaplotig	exon	165028444	165028522	100	+	.	Parent=FBgn0040384.1.mrna1;Target=FBgn0040384.1 928 1006 +
Chr1	stalkie_big_nohaplotig	CDS	165024237	165024338	.	+	0	Parent=FBgn0040384.1.mrna1;Target=FBgn0040384.1 1 102 +
Chr1	stalkie_big_nohaplotig	CDS	165024511	165024629	.	+	0	Parent=FBgn0040384.1.mrna1;Target=FBgn0040384.1 103 221 +
Chr1	stalkie_big_nohaplotig	CDS	165026150	165026270	.	+	1	Parent=FBgn0040384.1.mrna1;Target=FBgn0040384.1 222 342 +
Chr1	stalkie_big_nohaplotig	CDS	165026983	165027122	.	+	0	Parent=FBgn0040384.1.mrna1;Target=FBgn0040384.1 343 482 +
Chr1	stalkie_big_nohaplotig	CDS	165027863	165028080	.	+	1	Parent=FBgn0040384.1.mrna1;Target=FBgn0040384.1 483 700 +
Chr1	stalkie_big_nohaplotig	CDS	165028160	165028386	.	+	2	Parent=FBgn0040384.1.mrna1;Target=FBgn0040384.1 701 927 +
Chr1	stalkie_big_nohaplotig	CDS	165028444	165028521	.	+	0	Parent=FBgn0040384.1.mrna1;Target=FBgn0040384.1 928 1005 +
Chr1	stalkie_big_nohaplotig	mRNA	165027394	165027883	.	-	.	ID=comp146826_c0_seq1.mrna1;geneID=comp146826_c0_seq1.path1;Name=comp146826_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.6;matches=480;mismatches=9;indels=3;unknowns=0;Target=comp146826_c0_seq1 491 1 .;CDS_Target=comp146826_c0_seq1 65 3 .;locus=RLOC_00013454
Chr1	stalkie_big_nohaplotig	exon	165027394	165027883	97	-	.	Parent=comp146826_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165027819	165027881	.	-	0	Parent=comp146826_c0_seq1.mrna1
Chr1	gffcl	locus	165041078	165042819	.	+	.	ID=RLOC_00013455;geneIDs=FBgn0024980.1.path1;transcripts=FBgn0024980.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165041078	165042819	.	+	.	ID=FBgn0024980.1.mrna1;geneID=FBgn0024980.1.path1;Name=FBgn0024980.1;Dir=sensecoverage=100.0;identity=99.9;matches=932;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013455
Chr1	stalkie_big_nohaplotig	exon	165041078	165041179	100	+	.	Parent=FBgn0024980.1.mrna1;Target=FBgn0024980.1 1 102 +
Chr1	stalkie_big_nohaplotig	exon	165041436	165041537	100	+	.	Parent=FBgn0024980.1.mrna1;Target=FBgn0024980.1 103 204 +
Chr1	stalkie_big_nohaplotig	exon	165041718	165041811	100	+	.	Parent=FBgn0024980.1.mrna1;Target=FBgn0024980.1 205 298 +
Chr1	stalkie_big_nohaplotig	exon	165041893	165042135	100	+	.	Parent=FBgn0024980.1.mrna1;Target=FBgn0024980.1 299 541 +
Chr1	stalkie_big_nohaplotig	exon	165042219	165042292	100	+	.	Parent=FBgn0024980.1.mrna1;Target=FBgn0024980.1 542 615 +
Chr1	stalkie_big_nohaplotig	exon	165042372	165042509	100	+	.	Parent=FBgn0024980.1.mrna1;Target=FBgn0024980.1 616 753 +
Chr1	stalkie_big_nohaplotig	exon	165042567	165042677	99	+	.	Parent=FBgn0024980.1.mrna1;Target=FBgn0024980.1 754 864 +
Chr1	stalkie_big_nohaplotig	exon	165042751	165042819	100	+	.	Parent=FBgn0024980.1.mrna1;Target=FBgn0024980.1 865 933 +
Chr1	stalkie_big_nohaplotig	CDS	165041078	165041179	.	+	0	Parent=FBgn0024980.1.mrna1;Target=FBgn0024980.1 1 102 +
Chr1	stalkie_big_nohaplotig	CDS	165041436	165041537	.	+	0	Parent=FBgn0024980.1.mrna1;Target=FBgn0024980.1 103 204 +
Chr1	stalkie_big_nohaplotig	CDS	165041718	165041811	.	+	0	Parent=FBgn0024980.1.mrna1;Target=FBgn0024980.1 205 298 +
Chr1	stalkie_big_nohaplotig	CDS	165041893	165042135	.	+	2	Parent=FBgn0024980.1.mrna1;Target=FBgn0024980.1 299 541 +
Chr1	stalkie_big_nohaplotig	CDS	165042219	165042292	.	+	2	Parent=FBgn0024980.1.mrna1;Target=FBgn0024980.1 542 615 +
Chr1	stalkie_big_nohaplotig	CDS	165042372	165042509	.	+	0	Parent=FBgn0024980.1.mrna1;Target=FBgn0024980.1 616 753 +
Chr1	stalkie_big_nohaplotig	CDS	165042567	165042677	.	+	0	Parent=FBgn0024980.1.mrna1;Target=FBgn0024980.1 754 864 +
Chr1	stalkie_big_nohaplotig	CDS	165042751	165042819	.	+	0	Parent=FBgn0024980.1.mrna1;Target=FBgn0024980.1 865 933 +
Chr1	gffcl	locus	165047921	165051882	.	+	.	ID=RLOC_00013456;geneIDs=FBgn0000376.1.path1;transcripts=FBgn0000376.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165047921	165051882	.	+	.	ID=FBgn0000376.1.mrna1;geneID=FBgn0000376.1.path1;Name=FBgn0000376.1;Dir=sensecoverage=100.0;identity=99.7;matches=2698;mismatches=8;indels=0;unknowns=0;locus=RLOC_00013456
Chr1	stalkie_big_nohaplotig	exon	165047921	165048112	98	+	.	Parent=FBgn0000376.1.mrna1;Target=FBgn0000376.1 1 192 +
Chr1	stalkie_big_nohaplotig	exon	165048171	165048561	100	+	.	Parent=FBgn0000376.1.mrna1;Target=FBgn0000376.1 193 583 +
Chr1	stalkie_big_nohaplotig	exon	165048639	165048842	100	+	.	Parent=FBgn0000376.1.mrna1;Target=FBgn0000376.1 584 787 +
Chr1	stalkie_big_nohaplotig	exon	165048896	165050037	99	+	.	Parent=FBgn0000376.1.mrna1;Target=FBgn0000376.1 788 1929 +
Chr1	stalkie_big_nohaplotig	exon	165050100	165050246	99	+	.	Parent=FBgn0000376.1.mrna1;Target=FBgn0000376.1 1930 2076 +
Chr1	stalkie_big_nohaplotig	exon	165050306	165050687	99	+	.	Parent=FBgn0000376.1.mrna1;Target=FBgn0000376.1 2077 2458 +
Chr1	stalkie_big_nohaplotig	exon	165051576	165051724	100	+	.	Parent=FBgn0000376.1.mrna1;Target=FBgn0000376.1 2459 2607 +
Chr1	stalkie_big_nohaplotig	exon	165051784	165051882	100	+	.	Parent=FBgn0000376.1.mrna1;Target=FBgn0000376.1 2608 2706 +
Chr1	stalkie_big_nohaplotig	CDS	165047921	165048112	.	+	0	Parent=FBgn0000376.1.mrna1;Target=FBgn0000376.1 1 192 +
Chr1	stalkie_big_nohaplotig	CDS	165048171	165048561	.	+	0	Parent=FBgn0000376.1.mrna1;Target=FBgn0000376.1 193 583 +
Chr1	stalkie_big_nohaplotig	CDS	165048639	165048842	.	+	2	Parent=FBgn0000376.1.mrna1;Target=FBgn0000376.1 584 787 +
Chr1	stalkie_big_nohaplotig	CDS	165048896	165050037	.	+	2	Parent=FBgn0000376.1.mrna1;Target=FBgn0000376.1 788 1929 +
Chr1	stalkie_big_nohaplotig	CDS	165050100	165050246	.	+	0	Parent=FBgn0000376.1.mrna1;Target=FBgn0000376.1 1930 2076 +
Chr1	stalkie_big_nohaplotig	CDS	165050306	165050687	.	+	0	Parent=FBgn0000376.1.mrna1;Target=FBgn0000376.1 2077 2458 +
Chr1	stalkie_big_nohaplotig	CDS	165051576	165051724	.	+	2	Parent=FBgn0000376.1.mrna1;Target=FBgn0000376.1 2459 2607 +
Chr1	stalkie_big_nohaplotig	CDS	165051784	165051882	.	+	0	Parent=FBgn0000376.1.mrna1;Target=FBgn0000376.1 2608 2706 +
Chr1	gffcl	locus	165052690	165053189	.	+	.	ID=RLOC_00013457;geneIDs=comp147725_c0_seq1.path1;transcripts=comp147725_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165052690	165053189	.	+	.	ID=comp147725_c0_seq1.mrna1;geneID=comp147725_c0_seq1.path1;Name=comp147725_c0_seq1;Dir=indeterminatecoverage=40.2;identity=94.8;matches=489;mismatches=11;indels=16;unknowns=0;Target=comp147725_c0_seq1 516 1 .;CDS_Target=comp147725_c0_seq1 516 488 .;locus=RLOC_00013457
Chr1	stalkie_big_nohaplotig	exon	165052690	165053189	94	+	.	Parent=comp147725_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165053161	165053189	.	+	0	Parent=comp147725_c0_seq1.mrna1
Chr1	gffcl	locus	165061067	165071590	.	-	.	ID=RLOC_00013458;geneIDs=FBgn0259228.1.path1;transcripts=FBgn0259228.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165061067	165071590	.	-	.	ID=FBgn0259228.1.mrna1;geneID=FBgn0259228.1.path1;Name=FBgn0259228.1;Dir=sensecoverage=100.0;identity=99.9;matches=3683;mismatches=3;indels=1;unknowns=0;locus=RLOC_00013458
Chr1	stalkie_big_nohaplotig	exon	165061067	165061090	96	-	.	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 3663 3687 +
Chr1	stalkie_big_nohaplotig	exon	165061152	165061549	100	-	.	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 3265 3662 +
Chr1	stalkie_big_nohaplotig	exon	165061607	165061721	100	-	.	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 3150 3264 +
Chr1	stalkie_big_nohaplotig	exon	165061782	165061950	100	-	.	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 2981 3149 +
Chr1	stalkie_big_nohaplotig	exon	165062005	165062182	100	-	.	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 2803 2980 +
Chr1	stalkie_big_nohaplotig	exon	165062257	165062695	99	-	.	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 2364 2802 +
Chr1	stalkie_big_nohaplotig	exon	165062752	165062863	100	-	.	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 2252 2363 +
Chr1	stalkie_big_nohaplotig	exon	165063734	165063927	100	-	.	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 2058 2251 +
Chr1	stalkie_big_nohaplotig	exon	165064885	165065380	99	-	.	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 1562 2057 +
Chr1	stalkie_big_nohaplotig	exon	165065585	165065803	99	-	.	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 1343 1561 +
Chr1	stalkie_big_nohaplotig	exon	165066128	165066294	100	-	.	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 1176 1342 +
Chr1	stalkie_big_nohaplotig	exon	165066355	165066492	100	-	.	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 1038 1175 +
Chr1	stalkie_big_nohaplotig	exon	165066548	165066658	100	-	.	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 927 1037 +
Chr1	stalkie_big_nohaplotig	exon	165066726	165066898	100	-	.	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 754 926 +
Chr1	stalkie_big_nohaplotig	exon	165066964	165067154	100	-	.	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 563 753 +
Chr1	stalkie_big_nohaplotig	exon	165067225	165067439	100	-	.	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 348 562 +
Chr1	stalkie_big_nohaplotig	exon	165067497	165067764	100	-	.	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 80 347 +
Chr1	stalkie_big_nohaplotig	exon	165071512	165071590	100	-	.	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 1 79 +
Chr1	stalkie_big_nohaplotig	CDS	165061067	165061090	.	-	1	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 3663 3687 +
Chr1	stalkie_big_nohaplotig	CDS	165061152	165061549	.	-	0	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 3265 3662 +
Chr1	stalkie_big_nohaplotig	CDS	165061607	165061721	.	-	1	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 3150 3264 +
Chr1	stalkie_big_nohaplotig	CDS	165061782	165061950	.	-	2	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 2981 3149 +
Chr1	stalkie_big_nohaplotig	CDS	165062005	165062182	.	-	0	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 2803 2980 +
Chr1	stalkie_big_nohaplotig	CDS	165062257	165062695	.	-	1	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 2364 2802 +
Chr1	stalkie_big_nohaplotig	CDS	165062752	165062863	.	-	2	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 2252 2363 +
Chr1	stalkie_big_nohaplotig	CDS	165063734	165063927	.	-	1	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 2058 2251 +
Chr1	stalkie_big_nohaplotig	CDS	165064885	165065380	.	-	2	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 1562 2057 +
Chr1	stalkie_big_nohaplotig	CDS	165065585	165065803	.	-	2	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 1343 1561 +
Chr1	stalkie_big_nohaplotig	CDS	165066128	165066294	.	-	1	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 1176 1342 +
Chr1	stalkie_big_nohaplotig	CDS	165066355	165066492	.	-	1	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 1038 1175 +
Chr1	stalkie_big_nohaplotig	CDS	165066548	165066658	.	-	1	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 927 1037 +
Chr1	stalkie_big_nohaplotig	CDS	165066726	165066898	.	-	0	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 754 926 +
Chr1	stalkie_big_nohaplotig	CDS	165066964	165067154	.	-	2	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 563 753 +
Chr1	stalkie_big_nohaplotig	CDS	165067225	165067439	.	-	1	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 348 562 +
Chr1	stalkie_big_nohaplotig	CDS	165067497	165067764	.	-	2	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 80 347 +
Chr1	stalkie_big_nohaplotig	CDS	165071512	165071590	.	-	0	Parent=FBgn0259228.1.mrna1;Target=FBgn0259228.1 1 79 +
Chr1	gffcl	locus	165074204	165078375	.	+	.	ID=RLOC_00013459;geneIDs=FBgn0003390.1.path1;transcripts=FBgn0003390.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165074204	165078375	.	+	.	ID=FBgn0003390.1.mrna1;geneID=FBgn0003390.1.path1;Name=FBgn0003390.1;Dir=sensecoverage=100.0;identity=100.0;matches=1305;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013459
Chr1	stalkie_big_nohaplotig	exon	165074204	165074250	100	+	.	Parent=FBgn0003390.1.mrna1;Target=FBgn0003390.1 1 47 +
Chr1	stalkie_big_nohaplotig	exon	165075782	165076038	100	+	.	Parent=FBgn0003390.1.mrna1;Target=FBgn0003390.1 48 304 +
Chr1	stalkie_big_nohaplotig	exon	165076103	165076363	100	+	.	Parent=FBgn0003390.1.mrna1;Target=FBgn0003390.1 305 565 +
Chr1	stalkie_big_nohaplotig	exon	165076426	165076620	100	+	.	Parent=FBgn0003390.1.mrna1;Target=FBgn0003390.1 566 760 +
Chr1	stalkie_big_nohaplotig	exon	165076802	165077002	100	+	.	Parent=FBgn0003390.1.mrna1;Target=FBgn0003390.1 761 961 +
Chr1	stalkie_big_nohaplotig	exon	165077912	165078007	100	+	.	Parent=FBgn0003390.1.mrna1;Target=FBgn0003390.1 962 1057 +
Chr1	stalkie_big_nohaplotig	exon	165078063	165078266	100	+	.	Parent=FBgn0003390.1.mrna1;Target=FBgn0003390.1 1058 1261 +
Chr1	stalkie_big_nohaplotig	exon	165078332	165078375	100	+	.	Parent=FBgn0003390.1.mrna1;Target=FBgn0003390.1 1262 1305 +
Chr1	stalkie_big_nohaplotig	CDS	165074204	165074250	.	+	0	Parent=FBgn0003390.1.mrna1;Target=FBgn0003390.1 1 47 +
Chr1	stalkie_big_nohaplotig	CDS	165075782	165076038	.	+	1	Parent=FBgn0003390.1.mrna1;Target=FBgn0003390.1 48 304 +
Chr1	stalkie_big_nohaplotig	CDS	165076103	165076363	.	+	2	Parent=FBgn0003390.1.mrna1;Target=FBgn0003390.1 305 565 +
Chr1	stalkie_big_nohaplotig	CDS	165076426	165076620	.	+	2	Parent=FBgn0003390.1.mrna1;Target=FBgn0003390.1 566 760 +
Chr1	stalkie_big_nohaplotig	CDS	165076802	165077002	.	+	2	Parent=FBgn0003390.1.mrna1;Target=FBgn0003390.1 761 961 +
Chr1	stalkie_big_nohaplotig	CDS	165077912	165078007	.	+	2	Parent=FBgn0003390.1.mrna1;Target=FBgn0003390.1 962 1057 +
Chr1	stalkie_big_nohaplotig	CDS	165078063	165078266	.	+	2	Parent=FBgn0003390.1.mrna1;Target=FBgn0003390.1 1058 1261 +
Chr1	stalkie_big_nohaplotig	CDS	165078332	165078375	.	+	2	Parent=FBgn0003390.1.mrna1;Target=FBgn0003390.1 1262 1305 +
Chr1	gffcl	locus	165077105	165080032	.	-	.	ID=RLOC_00013460;geneIDs=FBgn0029502.1.path1;transcripts=FBgn0029502.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165077105	165080032	.	-	.	ID=FBgn0029502.1.mrna1;geneID=FBgn0029502.1.path1;Name=FBgn0029502.1;Dir=sensecoverage=100.0;identity=100.0;matches=690;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013460
Chr1	stalkie_big_nohaplotig	exon	165077105	165077260	100	-	.	Parent=FBgn0029502.1.mrna1;Target=FBgn0029502.1 535 690 +
Chr1	stalkie_big_nohaplotig	exon	165077314	165077432	100	-	.	Parent=FBgn0029502.1.mrna1;Target=FBgn0029502.1 416 534 +
Chr1	stalkie_big_nohaplotig	exon	165077480	165077859	100	-	.	Parent=FBgn0029502.1.mrna1;Target=FBgn0029502.1 36 415 +
Chr1	stalkie_big_nohaplotig	exon	165079998	165080032	100	-	.	Parent=FBgn0029502.1.mrna1;Target=FBgn0029502.1 1 35 +
Chr1	stalkie_big_nohaplotig	CDS	165077105	165077260	.	-	0	Parent=FBgn0029502.1.mrna1;Target=FBgn0029502.1 535 690 +
Chr1	stalkie_big_nohaplotig	CDS	165077314	165077432	.	-	2	Parent=FBgn0029502.1.mrna1;Target=FBgn0029502.1 416 534 +
Chr1	stalkie_big_nohaplotig	CDS	165077480	165077859	.	-	1	Parent=FBgn0029502.1.mrna1;Target=FBgn0029502.1 36 415 +
Chr1	stalkie_big_nohaplotig	CDS	165079998	165080032	.	-	0	Parent=FBgn0029502.1.mrna1;Target=FBgn0029502.1 1 35 +
Chr1	gffcl	locus	165083661	165084562	.	+	.	ID=RLOC_00013462;geneIDs=FBgn0025629.1.path1;transcripts=FBgn0025629.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165083661	165084562	.	+	.	ID=FBgn0025629.1.mrna1;geneID=FBgn0025629.1.path1;Name=FBgn0025629.1;Dir=sensecoverage=100.0;identity=100.0;matches=726;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013462
Chr1	stalkie_big_nohaplotig	exon	165083661	165083776	100	+	.	Parent=FBgn0025629.1.mrna1;Target=FBgn0025629.1 1 116 +
Chr1	stalkie_big_nohaplotig	exon	165083838	165084243	100	+	.	Parent=FBgn0025629.1.mrna1;Target=FBgn0025629.1 117 522 +
Chr1	stalkie_big_nohaplotig	exon	165084295	165084396	100	+	.	Parent=FBgn0025629.1.mrna1;Target=FBgn0025629.1 523 624 +
Chr1	stalkie_big_nohaplotig	exon	165084461	165084562	100	+	.	Parent=FBgn0025629.1.mrna1;Target=FBgn0025629.1 625 726 +
Chr1	stalkie_big_nohaplotig	CDS	165083661	165083776	.	+	0	Parent=FBgn0025629.1.mrna1;Target=FBgn0025629.1 1 116 +
Chr1	stalkie_big_nohaplotig	CDS	165083838	165084243	.	+	1	Parent=FBgn0025629.1.mrna1;Target=FBgn0025629.1 117 522 +
Chr1	stalkie_big_nohaplotig	CDS	165084295	165084396	.	+	0	Parent=FBgn0025629.1.mrna1;Target=FBgn0025629.1 523 624 +
Chr1	stalkie_big_nohaplotig	CDS	165084461	165084562	.	+	0	Parent=FBgn0025629.1.mrna1;Target=FBgn0025629.1 625 726 +
Chr1	gffcl	locus	165086505	165087416	.	+	.	ID=RLOC_00013463;geneIDs=FBgn0025624.1.path1;transcripts=FBgn0025624.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165086505	165087416	.	+	.	ID=FBgn0025624.1.mrna1;geneID=FBgn0025624.1.path1;Name=FBgn0025624.1;Dir=sensecoverage=100.0;identity=100.0;matches=744;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013463
Chr1	stalkie_big_nohaplotig	exon	165086505	165086575	100	+	.	Parent=FBgn0025624.1.mrna1;Target=FBgn0025624.1 1 71 +
Chr1	stalkie_big_nohaplotig	exon	165086627	165086748	100	+	.	Parent=FBgn0025624.1.mrna1;Target=FBgn0025624.1 72 193 +
Chr1	stalkie_big_nohaplotig	exon	165086813	165087200	100	+	.	Parent=FBgn0025624.1.mrna1;Target=FBgn0025624.1 194 581 +
Chr1	stalkie_big_nohaplotig	exon	165087254	165087416	100	+	.	Parent=FBgn0025624.1.mrna1;Target=FBgn0025624.1 582 744 +
Chr1	stalkie_big_nohaplotig	CDS	165086505	165086575	.	+	0	Parent=FBgn0025624.1.mrna1;Target=FBgn0025624.1 1 71 +
Chr1	stalkie_big_nohaplotig	CDS	165086627	165086748	.	+	1	Parent=FBgn0025624.1.mrna1;Target=FBgn0025624.1 72 193 +
Chr1	stalkie_big_nohaplotig	CDS	165086813	165087200	.	+	2	Parent=FBgn0025624.1.mrna1;Target=FBgn0025624.1 194 581 +
Chr1	stalkie_big_nohaplotig	CDS	165087254	165087416	.	+	1	Parent=FBgn0025624.1.mrna1;Target=FBgn0025624.1 582 744 +
Chr1	gffcl	locus	165087544	165089203	.	-	.	ID=RLOC_00013464;geneIDs=FBgn0040394.1.path1;transcripts=FBgn0040394.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165087544	165089203	.	-	.	ID=FBgn0040394.1.mrna1;geneID=FBgn0040394.1.path1;Name=FBgn0040394.1;Dir=sensecoverage=100.0;identity=99.9;matches=1463;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013464
Chr1	stalkie_big_nohaplotig	exon	165087544	165087754	100	-	.	Parent=FBgn0040394.1.mrna1;Target=FBgn0040394.1 1254 1464 +
Chr1	stalkie_big_nohaplotig	exon	165087827	165088206	100	-	.	Parent=FBgn0040394.1.mrna1;Target=FBgn0040394.1 874 1253 +
Chr1	stalkie_big_nohaplotig	exon	165088261	165088651	100	-	.	Parent=FBgn0040394.1.mrna1;Target=FBgn0040394.1 483 873 +
Chr1	stalkie_big_nohaplotig	exon	165088722	165089203	99	-	.	Parent=FBgn0040394.1.mrna1;Target=FBgn0040394.1 1 482 +
Chr1	stalkie_big_nohaplotig	CDS	165087544	165087754	.	-	1	Parent=FBgn0040394.1.mrna1;Target=FBgn0040394.1 1254 1464 +
Chr1	stalkie_big_nohaplotig	CDS	165087827	165088206	.	-	0	Parent=FBgn0040394.1.mrna1;Target=FBgn0040394.1 874 1253 +
Chr1	stalkie_big_nohaplotig	CDS	165088261	165088651	.	-	1	Parent=FBgn0040394.1.mrna1;Target=FBgn0040394.1 483 873 +
Chr1	stalkie_big_nohaplotig	CDS	165088722	165089203	.	-	0	Parent=FBgn0040394.1.mrna1;Target=FBgn0040394.1 1 482 +
Chr1	gffcl	locus	165091630	165128043	.	+	.	ID=RLOC_00013465;geneIDs=FBgn0001624.1.path1;transcripts=FBgn0001624.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165091630	165128043	.	+	.	ID=FBgn0001624.1.mrna1;geneID=FBgn0001624.1.path1;Name=FBgn0001624.1;Dir=sensecoverage=100.0;identity=99.9;matches=2904;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013465
Chr1	stalkie_big_nohaplotig	exon	165091630	165091669	100	+	.	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 1 40 +
Chr1	stalkie_big_nohaplotig	exon	165096784	165096915	100	+	.	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 41 172 +
Chr1	stalkie_big_nohaplotig	exon	165100918	165101042	100	+	.	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 173 297 +
Chr1	stalkie_big_nohaplotig	exon	165101753	165101857	100	+	.	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 298 402 +
Chr1	stalkie_big_nohaplotig	exon	165103624	165103758	99	+	.	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 403 537 +
Chr1	stalkie_big_nohaplotig	exon	165106559	165107107	100	+	.	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 538 1086 +
Chr1	stalkie_big_nohaplotig	exon	165107163	165107490	100	+	.	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 1087 1414 +
Chr1	stalkie_big_nohaplotig	exon	165107855	165107942	100	+	.	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 1415 1502 +
Chr1	stalkie_big_nohaplotig	exon	165112526	165112739	100	+	.	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 1503 1716 +
Chr1	stalkie_big_nohaplotig	exon	165112812	165113225	99	+	.	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 1717 2130 +
Chr1	stalkie_big_nohaplotig	exon	165113302	165113404	100	+	.	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 2131 2233 +
Chr1	stalkie_big_nohaplotig	exon	165119312	165119356	100	+	.	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 2234 2278 +
Chr1	stalkie_big_nohaplotig	exon	165127187	165127336	99	+	.	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 2279 2428 +
Chr1	stalkie_big_nohaplotig	exon	165127419	165127701	100	+	.	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 2429 2711 +
Chr1	stalkie_big_nohaplotig	exon	165127760	165127851	100	+	.	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 2712 2803 +
Chr1	stalkie_big_nohaplotig	exon	165127940	165128043	100	+	.	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 2804 2907 +
Chr1	stalkie_big_nohaplotig	CDS	165091630	165091669	.	+	0	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 1 40 +
Chr1	stalkie_big_nohaplotig	CDS	165096784	165096915	.	+	2	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 41 172 +
Chr1	stalkie_big_nohaplotig	CDS	165100918	165101042	.	+	2	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 173 297 +
Chr1	stalkie_big_nohaplotig	CDS	165101753	165101857	.	+	0	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 298 402 +
Chr1	stalkie_big_nohaplotig	CDS	165103624	165103758	.	+	0	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 403 537 +
Chr1	stalkie_big_nohaplotig	CDS	165106559	165107107	.	+	0	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 538 1086 +
Chr1	stalkie_big_nohaplotig	CDS	165107163	165107490	.	+	0	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 1087 1414 +
Chr1	stalkie_big_nohaplotig	CDS	165107855	165107942	.	+	2	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 1415 1502 +
Chr1	stalkie_big_nohaplotig	CDS	165112526	165112739	.	+	1	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 1503 1716 +
Chr1	stalkie_big_nohaplotig	CDS	165112812	165113225	.	+	0	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 1717 2130 +
Chr1	stalkie_big_nohaplotig	CDS	165113302	165113404	.	+	0	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 2131 2233 +
Chr1	stalkie_big_nohaplotig	CDS	165119312	165119356	.	+	2	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 2234 2278 +
Chr1	stalkie_big_nohaplotig	CDS	165127187	165127336	.	+	2	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 2279 2428 +
Chr1	stalkie_big_nohaplotig	CDS	165127419	165127701	.	+	2	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 2429 2711 +
Chr1	stalkie_big_nohaplotig	CDS	165127760	165127851	.	+	1	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 2712 2803 +
Chr1	stalkie_big_nohaplotig	CDS	165127940	165128043	.	+	2	Parent=FBgn0001624.1.mrna1;Target=FBgn0001624.1 2804 2907 +
Chr1	gffcl	locus	165099427	165100750	.	+	.	ID=RLOC_00013466;geneIDs=FBgn0036184.1.path1;transcripts=FBgn0036184.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165099427	165100750	.	+	.	ID=FBgn0036184.1.mrna1;geneID=FBgn0036184.1.path1;Name=FBgn0036184.1;Dir=sensecoverage=100.0;identity=99.9;matches=1205;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013466
Chr1	stalkie_big_nohaplotig	exon	165099427	165099664	100	+	.	Parent=FBgn0036184.1.mrna1;Target=FBgn0036184.1 1 238 +
Chr1	stalkie_big_nohaplotig	exon	165099722	165099962	100	+	.	Parent=FBgn0036184.1.mrna1;Target=FBgn0036184.1 239 479 +
Chr1	stalkie_big_nohaplotig	exon	165100024	165100750	99	+	.	Parent=FBgn0036184.1.mrna1;Target=FBgn0036184.1 480 1206 +
Chr1	stalkie_big_nohaplotig	CDS	165099427	165099664	.	+	0	Parent=FBgn0036184.1.mrna1;Target=FBgn0036184.1 1 238 +
Chr1	stalkie_big_nohaplotig	CDS	165099722	165099962	.	+	2	Parent=FBgn0036184.1.mrna1;Target=FBgn0036184.1 239 479 +
Chr1	stalkie_big_nohaplotig	CDS	165100024	165100750	.	+	1	Parent=FBgn0036184.1.mrna1;Target=FBgn0036184.1 480 1206 +
Chr1	gffcl	locus	165108673	165109057	.	+	.	ID=RLOC_00013467;geneIDs=comp151387_c0_seq1.path1;transcripts=comp151387_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165108673	165109057	.	+	.	ID=comp151387_c0_seq1.mrna1;geneID=comp151387_c0_seq1.path1;Name=comp151387_c0_seq1;Dir=indeterminatecoverage=99.5;identity=98.7;matches=383;mismatches=2;indels=3;unknowns=0;Target=comp151387_c0_seq1 390 3 .;CDS_Target=comp151387_c0_seq1 367 293 .;locus=RLOC_00013467
Chr1	stalkie_big_nohaplotig	exon	165108673	165109057	98	+	.	Parent=comp151387_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165108960	165109034	.	+	0	Parent=comp151387_c0_seq1.mrna1
Chr1	gffcl	locus	165115219	165116060	.	-	.	ID=RLOC_00013468;geneIDs=comp163114_c0_seq1.path1;transcripts=comp163114_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165115219	165116060	.	-	.	ID=comp163114_c0_seq1.mrna1;geneID=comp163114_c0_seq1.path1;Name=comp163114_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=822;mismatches=20;indels=0;unknowns=0;Target=comp163114_c0_seq1 842 1 .;CDS_Target=comp163114_c0_seq1 455 192 .;locus=RLOC_00013468
Chr1	stalkie_big_nohaplotig	exon	165115219	165116060	97	-	.	Parent=comp163114_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165115606	165115869	.	-	0	Parent=comp163114_c0_seq1.mrna1
Chr1	gffcl	locus	165118547	165119117	.	+	.	ID=RLOC_00013469;geneIDs=comp156404_c0_seq1.path2;transcripts=comp156404_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	165118547	165119117	.	+	.	ID=comp156404_c0_seq1.mrna2;geneID=comp156404_c0_seq1.path2;Name=comp156404_c0_seq1;Dir=indeterminatecoverage=63.6;identity=95.4;matches=561;mismatches=10;indels=17;unknowns=0;Target=comp156404_c0_seq1 925 338 .;locus=RLOC_00013469
Chr1	stalkie_big_nohaplotig	exon	165118547	165119117	95	+	.	Parent=comp156404_c0_seq1.mrna2
Chr1	gffcl	locus	165119659	165120255	.	+	.	ID=RLOC_00013470;geneIDs=comp145294_c0_seq1.path1;transcripts=comp145294_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165119659	165120255	.	+	.	ID=comp145294_c0_seq1.mrna1;geneID=comp145294_c0_seq1.path1;Name=comp145294_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=595;mismatches=2;indels=0;unknowns=0;Target=comp145294_c0_seq1 597 1 .;CDS_Target=comp145294_c0_seq1 93 1 .;locus=RLOC_00013470
Chr1	stalkie_big_nohaplotig	exon	165119659	165120255	99	+	.	Parent=comp145294_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165119659	165119751	.	+	0	Parent=comp145294_c0_seq1.mrna1
Chr1	gffcl	locus	165125865	165126791	.	-	.	ID=RLOC_00013471;geneIDs=comp149591_c0_seq1.path1;transcripts=comp149591_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165125865	165126791	.	-	.	ID=comp149591_c0_seq1.mrna1;geneID=comp149591_c0_seq1.path1;Name=comp149591_c0_seq1;Dir=indeterminatecoverage=97.8;identity=98.8;matches=921;mismatches=5;indels=6;unknowns=0;Target=comp149591_c0_seq1 932 2 .;CDS_Target=comp149591_c0_seq1 91 2 .;locus=RLOC_00013471
Chr1	stalkie_big_nohaplotig	exon	165125865	165126791	98	-	.	Parent=comp149591_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165126705	165126791	.	-	0	Parent=comp149591_c0_seq1.mrna1
Chr1	gffcl	locus	165128528	165129294	.	+	.	ID=RLOC_00013472;geneIDs=comp146323_c0_seq1.path1;transcripts=comp146323_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165128528	165129294	.	+	.	ID=comp146323_c0_seq1.mrna1;geneID=comp146323_c0_seq1.path1;Name=comp146323_c0_seq1;Dir=indeterminatecoverage=98.7;identity=99.9;matches=766;mismatches=1;indels=0;unknowns=0;Target=comp146323_c0_seq1 767 1 .;CDS_Target=comp146323_c0_seq1 537 448 .;locus=RLOC_00013472
Chr1	stalkie_big_nohaplotig	exon	165128528	165129294	99	+	.	Parent=comp146323_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165128975	165129064	.	+	0	Parent=comp146323_c0_seq1.mrna1
Chr1	gffcl	locus	165133600	165140278	.	+	.	ID=RLOC_00013473;geneIDs=FBgn0029903.1.path1;transcripts=FBgn0029903.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165133600	165140278	.	+	.	ID=FBgn0029903.1.mrna1;geneID=FBgn0029903.1.path1;Name=FBgn0029903.1;Dir=sensecoverage=99.9;identity=99.8;matches=3084;mismatches=7;indels=0;unknowns=0;locus=RLOC_00013473
Chr1	stalkie_big_nohaplotig	exon	165133600	165133932	99	+	.	Parent=FBgn0029903.1.mrna1;Target=FBgn0029903.1 1 333 +
Chr1	stalkie_big_nohaplotig	exon	165133988	165134174	98	+	.	Parent=FBgn0029903.1.mrna1;Target=FBgn0029903.1 334 520 +
Chr1	stalkie_big_nohaplotig	exon	165134253	165134809	99	+	.	Parent=FBgn0029903.1.mrna1;Target=FBgn0029903.1 521 1077 +
Chr1	stalkie_big_nohaplotig	exon	165134878	165135030	100	+	.	Parent=FBgn0029903.1.mrna1;Target=FBgn0029903.1 1078 1230 +
Chr1	stalkie_big_nohaplotig	exon	165137108	165137288	100	+	.	Parent=FBgn0029903.1.mrna1;Target=FBgn0029903.1 1231 1411 +
Chr1	stalkie_big_nohaplotig	exon	165137988	165138052	100	+	.	Parent=FBgn0029903.1.mrna1;Target=FBgn0029903.1 1412 1476 +
Chr1	stalkie_big_nohaplotig	exon	165138283	165138461	100	+	.	Parent=FBgn0029903.1.mrna1;Target=FBgn0029903.1 1477 1655 +
Chr1	stalkie_big_nohaplotig	exon	165138595	165139515	99	+	.	Parent=FBgn0029903.1.mrna1;Target=FBgn0029903.1 1656 2576 +
Chr1	stalkie_big_nohaplotig	exon	165139572	165139917	100	+	.	Parent=FBgn0029903.1.mrna1;Target=FBgn0029903.1 2577 2922 +
Chr1	stalkie_big_nohaplotig	exon	165139973	165140108	100	+	.	Parent=FBgn0029903.1.mrna1;Target=FBgn0029903.1 2923 3058 +
Chr1	stalkie_big_nohaplotig	exon	165140246	165140278	100	+	.	Parent=FBgn0029903.1.mrna1;Target=FBgn0029903.1 3059 3091 +
Chr1	stalkie_big_nohaplotig	CDS	165133600	165133932	.	+	0	Parent=FBgn0029903.1.mrna1;Target=FBgn0029903.1 1 333 +
Chr1	stalkie_big_nohaplotig	CDS	165133988	165134174	.	+	0	Parent=FBgn0029903.1.mrna1;Target=FBgn0029903.1 334 520 +
Chr1	stalkie_big_nohaplotig	CDS	165134253	165134809	.	+	2	Parent=FBgn0029903.1.mrna1;Target=FBgn0029903.1 521 1077 +
Chr1	stalkie_big_nohaplotig	CDS	165134878	165135030	.	+	0	Parent=FBgn0029903.1.mrna1;Target=FBgn0029903.1 1078 1230 +
Chr1	stalkie_big_nohaplotig	CDS	165137108	165137288	.	+	0	Parent=FBgn0029903.1.mrna1;Target=FBgn0029903.1 1231 1411 +
Chr1	stalkie_big_nohaplotig	CDS	165137988	165138052	.	+	2	Parent=FBgn0029903.1.mrna1;Target=FBgn0029903.1 1412 1476 +
Chr1	stalkie_big_nohaplotig	CDS	165138283	165138461	.	+	0	Parent=FBgn0029903.1.mrna1;Target=FBgn0029903.1 1477 1655 +
Chr1	stalkie_big_nohaplotig	CDS	165138595	165139515	.	+	1	Parent=FBgn0029903.1.mrna1;Target=FBgn0029903.1 1656 2576 +
Chr1	stalkie_big_nohaplotig	CDS	165139572	165139917	.	+	1	Parent=FBgn0029903.1.mrna1;Target=FBgn0029903.1 2577 2922 +
Chr1	stalkie_big_nohaplotig	CDS	165139973	165140108	.	+	0	Parent=FBgn0029903.1.mrna1;Target=FBgn0029903.1 2923 3058 +
Chr1	stalkie_big_nohaplotig	CDS	165140246	165140277	.	+	2	Parent=FBgn0029903.1.mrna1;Target=FBgn0029903.1 3059 3090 +
Chr1	gffcl	locus	165142491	165143931	.	-	.	ID=RLOC_00013474;geneIDs=FBgn0029905.1.path1;transcripts=FBgn0029905.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165142491	165143931	.	-	.	ID=FBgn0029905.1.mrna1;geneID=FBgn0029905.1.path1;Name=FBgn0029905.1;Dir=sensecoverage=100.0;identity=99.8;matches=1383;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013474
Chr1	stalkie_big_nohaplotig	exon	165142491	165142814	100	-	.	Parent=FBgn0029905.1.mrna1;Target=FBgn0029905.1 1063 1386 +
Chr1	stalkie_big_nohaplotig	exon	165142870	165143931	99	-	.	Parent=FBgn0029905.1.mrna1;Target=FBgn0029905.1 1 1062 +
Chr1	stalkie_big_nohaplotig	CDS	165142491	165142814	.	-	0	Parent=FBgn0029905.1.mrna1;Target=FBgn0029905.1 1063 1386 +
Chr1	stalkie_big_nohaplotig	CDS	165142870	165143931	.	-	0	Parent=FBgn0029905.1.mrna1;Target=FBgn0029905.1 1 1062 +
Chr1	gffcl	locus	165178798	165185492	.	+	.	ID=RLOC_00013476;geneIDs=FBgn0025864.1.path1;transcripts=FBgn0025864.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165178798	165185492	.	+	.	ID=FBgn0025864.1.mrna1;geneID=FBgn0025864.1.path1;Name=FBgn0025864.1;Dir=sensecoverage=100.0;identity=99.8;matches=4938;mismatches=12;indels=0;unknowns=0;locus=RLOC_00013476
Chr1	stalkie_big_nohaplotig	exon	165178798	165179098	100	+	.	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 1 301 +
Chr1	stalkie_big_nohaplotig	exon	165179171	165179717	99	+	.	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 302 848 +
Chr1	stalkie_big_nohaplotig	exon	165179772	165179922	100	+	.	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 849 999 +
Chr1	stalkie_big_nohaplotig	exon	165179986	165180087	100	+	.	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 1000 1101 +
Chr1	stalkie_big_nohaplotig	exon	165180157	165180326	100	+	.	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 1102 1271 +
Chr1	stalkie_big_nohaplotig	exon	165180392	165180605	100	+	.	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 1272 1485 +
Chr1	stalkie_big_nohaplotig	exon	165180673	165180828	99	+	.	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 1486 1641 +
Chr1	stalkie_big_nohaplotig	exon	165180882	165181046	100	+	.	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 1642 1806 +
Chr1	stalkie_big_nohaplotig	exon	165181110	165181347	99	+	.	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 1807 2044 +
Chr1	stalkie_big_nohaplotig	exon	165181403	165182636	99	+	.	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 2045 3278 +
Chr1	stalkie_big_nohaplotig	exon	165182689	165182991	100	+	.	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 3279 3581 +
Chr1	stalkie_big_nohaplotig	exon	165183186	165183266	100	+	.	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 3582 3662 +
Chr1	stalkie_big_nohaplotig	exon	165184014	165184389	100	+	.	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 3663 4038 +
Chr1	stalkie_big_nohaplotig	exon	165184453	165184869	99	+	.	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 4039 4455 +
Chr1	stalkie_big_nohaplotig	exon	165184937	165185115	98	+	.	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 4456 4634 +
Chr1	stalkie_big_nohaplotig	exon	165185177	165185492	99	+	.	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 4635 4950 +
Chr1	stalkie_big_nohaplotig	CDS	165178798	165179098	.	+	0	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 1 301 +
Chr1	stalkie_big_nohaplotig	CDS	165179171	165179717	.	+	2	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 302 848 +
Chr1	stalkie_big_nohaplotig	CDS	165179772	165179922	.	+	1	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 849 999 +
Chr1	stalkie_big_nohaplotig	CDS	165179986	165180087	.	+	0	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 1000 1101 +
Chr1	stalkie_big_nohaplotig	CDS	165180157	165180326	.	+	0	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 1102 1271 +
Chr1	stalkie_big_nohaplotig	CDS	165180392	165180605	.	+	1	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 1272 1485 +
Chr1	stalkie_big_nohaplotig	CDS	165180673	165180828	.	+	0	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 1486 1641 +
Chr1	stalkie_big_nohaplotig	CDS	165180882	165181046	.	+	0	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 1642 1806 +
Chr1	stalkie_big_nohaplotig	CDS	165181110	165181347	.	+	0	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 1807 2044 +
Chr1	stalkie_big_nohaplotig	CDS	165181403	165182636	.	+	2	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 2045 3278 +
Chr1	stalkie_big_nohaplotig	CDS	165182689	165182991	.	+	1	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 3279 3581 +
Chr1	stalkie_big_nohaplotig	CDS	165183186	165183266	.	+	1	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 3582 3662 +
Chr1	stalkie_big_nohaplotig	CDS	165184014	165184389	.	+	1	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 3663 4038 +
Chr1	stalkie_big_nohaplotig	CDS	165184453	165184869	.	+	0	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 4039 4455 +
Chr1	stalkie_big_nohaplotig	CDS	165184937	165185115	.	+	0	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 4456 4634 +
Chr1	stalkie_big_nohaplotig	CDS	165185177	165185492	.	+	1	Parent=FBgn0025864.1.mrna1;Target=FBgn0025864.1 4635 4950 +
Chr1	gffcl	locus	165255783	165256571	.	-	.	ID=RLOC_00013479;geneIDs=comp129329_c2_seq1.path1;transcripts=comp129329_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165255783	165256571	.	-	.	ID=comp129329_c2_seq1.mrna1;geneID=comp129329_c2_seq1.path1;Name=comp129329_c2_seq1;Dir=indeterminatecoverage=95.2;identity=98.2;matches=775;mismatches=6;indels=8;unknowns=0;Target=comp129329_c2_seq1 818 38 .;CDS_Target=comp129329_c2_seq1 443 261 .;locus=RLOC_00013479
Chr1	stalkie_big_nohaplotig	exon	165255783	165256571	98	-	.	Parent=comp129329_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165256158	165256340	.	-	0	Parent=comp129329_c2_seq1.mrna1
Chr1	gffcl	locus	165264880	165266407	.	+	.	ID=RLOC_00013480;geneIDs=FBgn0010269.1.path1;transcripts=FBgn0010269.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165264880	165266407	.	+	.	ID=FBgn0010269.1.mrna1;geneID=FBgn0010269.1.path1;Name=FBgn0010269.1;Dir=sensecoverage=99.2;identity=99.8;matches=1229;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013480
Chr1	stalkie_big_nohaplotig	exon	165264880	165265033	100	+	.	Parent=FBgn0010269.1.mrna1;Target=FBgn0010269.1 11 164 +
Chr1	stalkie_big_nohaplotig	exon	165265202	165265841	99	+	.	Parent=FBgn0010269.1.mrna1;Target=FBgn0010269.1 165 804 +
Chr1	stalkie_big_nohaplotig	exon	165265914	165266240	99	+	.	Parent=FBgn0010269.1.mrna1;Target=FBgn0010269.1 805 1131 +
Chr1	stalkie_big_nohaplotig	exon	165266297	165266407	100	+	.	Parent=FBgn0010269.1.mrna1;Target=FBgn0010269.1 1132 1242 +
Chr1	stalkie_big_nohaplotig	CDS	165264882	165265033	.	+	0	Parent=FBgn0010269.1.mrna1;Target=FBgn0010269.1 13 164 +
Chr1	stalkie_big_nohaplotig	CDS	165265202	165265841	.	+	1	Parent=FBgn0010269.1.mrna1;Target=FBgn0010269.1 165 804 +
Chr1	stalkie_big_nohaplotig	CDS	165265914	165266240	.	+	0	Parent=FBgn0010269.1.mrna1;Target=FBgn0010269.1 805 1131 +
Chr1	stalkie_big_nohaplotig	CDS	165266297	165266407	.	+	0	Parent=FBgn0010269.1.mrna1;Target=FBgn0010269.1 1132 1242 +
Chr1	gffcl	locus	165267313	165270507	.	+	.	ID=RLOC_00013481;geneIDs=FBgn0030114.2.path1,comp149332_c0_seq1.path1;transcripts=FBgn0030114.2.mrna1,comp149332_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165267313	165270507	.	+	.	ID=FBgn0030114.2.mrna1;geneID=FBgn0030114.2.path1;Name=FBgn0030114.2;Dir=sensecoverage=100.0;identity=99.4;matches=1989;mismatches=12;indels=1;unknowns=0;locus=RLOC_00013481
Chr1	stalkie_big_nohaplotig	exon	165267313	165267633	98	+	.	Parent=FBgn0030114.2.mrna1;Target=FBgn0030114.2 1 320 +
Chr1	stalkie_big_nohaplotig	exon	165268246	165268609	99	+	.	Parent=FBgn0030114.2.mrna1;Target=FBgn0030114.2 321 684 +
Chr1	stalkie_big_nohaplotig	exon	165268676	165269053	99	+	.	Parent=FBgn0030114.2.mrna1;Target=FBgn0030114.2 685 1062 +
Chr1	stalkie_big_nohaplotig	exon	165269107	165269408	99	+	.	Parent=FBgn0030114.2.mrna1;Target=FBgn0030114.2 1063 1364 +
Chr1	stalkie_big_nohaplotig	exon	165269463	165269670	99	+	.	Parent=FBgn0030114.2.mrna1;Target=FBgn0030114.2 1365 1572 +
Chr1	stalkie_big_nohaplotig	exon	165269721	165269843	99	+	.	Parent=FBgn0030114.2.mrna1;Target=FBgn0030114.2 1573 1695 +
Chr1	stalkie_big_nohaplotig	exon	165269919	165270149	99	+	.	Parent=FBgn0030114.2.mrna1;Target=FBgn0030114.2 1696 1926 +
Chr1	stalkie_big_nohaplotig	exon	165270433	165270507	100	+	.	Parent=FBgn0030114.2.mrna1;Target=FBgn0030114.2 1927 2001 +
Chr1	stalkie_big_nohaplotig	CDS	165267386	165267633	.	+	0	Parent=FBgn0030114.2.mrna1;Target=FBgn0030114.2 73 320 +
Chr1	stalkie_big_nohaplotig	CDS	165268246	165268609	.	+	1	Parent=FBgn0030114.2.mrna1;Target=FBgn0030114.2 321 684 +
Chr1	stalkie_big_nohaplotig	CDS	165268676	165269053	.	+	0	Parent=FBgn0030114.2.mrna1;Target=FBgn0030114.2 685 1062 +
Chr1	stalkie_big_nohaplotig	CDS	165269107	165269408	.	+	0	Parent=FBgn0030114.2.mrna1;Target=FBgn0030114.2 1063 1364 +
Chr1	stalkie_big_nohaplotig	CDS	165269463	165269670	.	+	1	Parent=FBgn0030114.2.mrna1;Target=FBgn0030114.2 1365 1572 +
Chr1	stalkie_big_nohaplotig	CDS	165269721	165269843	.	+	0	Parent=FBgn0030114.2.mrna1;Target=FBgn0030114.2 1573 1695 +
Chr1	stalkie_big_nohaplotig	CDS	165269919	165270149	.	+	0	Parent=FBgn0030114.2.mrna1;Target=FBgn0030114.2 1696 1926 +
Chr1	stalkie_big_nohaplotig	CDS	165270433	165270507	.	+	0	Parent=FBgn0030114.2.mrna1;Target=FBgn0030114.2 1927 2001 +
Chr1	stalkie_big_nohaplotig	mRNA	165267610	165268268	.	+	.	ID=comp149332_c0_seq1.mrna1;geneID=comp149332_c0_seq1.path1;Name=comp149332_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=655;mismatches=4;indels=0;unknowns=0;Target=comp149332_c0_seq1 659 1 .;CDS_Target=comp149332_c0_seq1 659 525 .;locus=RLOC_00013481
Chr1	stalkie_big_nohaplotig	exon	165267610	165268268	99	+	.	Parent=comp149332_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165268134	165268268	.	+	0	Parent=comp149332_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165274462	165275135	.	-	.	ID=comp116469_c0_seq1.mrna1;geneID=comp116469_c0_seq1.path1;Name=comp116469_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=674;mismatches=0;indels=0;unknowns=0;Target=comp116469_c0_seq1 674 1 .;CDS_Target=comp116469_c0_seq1 179 90 .;locus=RLOC_00013482
Chr1	stalkie_big_nohaplotig	exon	165274462	165275135	100	-	.	Parent=comp116469_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165274957	165275046	.	-	0	Parent=comp116469_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165276204	165276651	.	+	.	ID=comp143489_c0_seq1.mrna1;geneID=comp143489_c0_seq1.path1;Name=comp143489_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=446;mismatches=2;indels=1;unknowns=0;Target=comp143489_c0_seq1 449 1 .;CDS_Target=comp143489_c0_seq1 235 137 .;locus=RLOC_00013482
Chr1	stalkie_big_nohaplotig	exon	165276204	165276651	99	+	.	Parent=comp143489_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165276340	165276438	.	+	0	Parent=comp143489_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165277299	165281539	.	+	.	ID=FBgn0031187.1.mrna1;geneID=FBgn0031187.1.path1;Name=FBgn0031187.1;Dir=sensecoverage=100.0;identity=99.8;matches=2984;mismatches=7;indels=0;unknowns=0;locus=RLOC_00013482
Chr1	stalkie_big_nohaplotig	exon	165277299	165279146	99	+	.	Parent=FBgn0031187.1.mrna1;Target=FBgn0031187.1 1 1848 +
Chr1	stalkie_big_nohaplotig	exon	165279495	165279654	98	+	.	Parent=FBgn0031187.1.mrna1;Target=FBgn0031187.1 1849 2008 +
Chr1	stalkie_big_nohaplotig	exon	165280160	165280306	100	+	.	Parent=FBgn0031187.1.mrna1;Target=FBgn0031187.1 2009 2155 +
Chr1	stalkie_big_nohaplotig	exon	165280372	165280585	100	+	.	Parent=FBgn0031187.1.mrna1;Target=FBgn0031187.1 2156 2369 +
Chr1	stalkie_big_nohaplotig	exon	165280645	165280967	100	+	.	Parent=FBgn0031187.1.mrna1;Target=FBgn0031187.1 2370 2692 +
Chr1	stalkie_big_nohaplotig	exon	165281038	165281187	100	+	.	Parent=FBgn0031187.1.mrna1;Target=FBgn0031187.1 2693 2842 +
Chr1	stalkie_big_nohaplotig	exon	165281337	165281415	100	+	.	Parent=FBgn0031187.1.mrna1;Target=FBgn0031187.1 2843 2921 +
Chr1	stalkie_big_nohaplotig	exon	165281470	165281539	100	+	.	Parent=FBgn0031187.1.mrna1;Target=FBgn0031187.1 2922 2991 +
Chr1	stalkie_big_nohaplotig	CDS	165277299	165279146	.	+	0	Parent=FBgn0031187.1.mrna1;Target=FBgn0031187.1 1 1848 +
Chr1	stalkie_big_nohaplotig	CDS	165279495	165279654	.	+	0	Parent=FBgn0031187.1.mrna1;Target=FBgn0031187.1 1849 2008 +
Chr1	stalkie_big_nohaplotig	CDS	165280160	165280306	.	+	2	Parent=FBgn0031187.1.mrna1;Target=FBgn0031187.1 2009 2155 +
Chr1	stalkie_big_nohaplotig	CDS	165280372	165280585	.	+	2	Parent=FBgn0031187.1.mrna1;Target=FBgn0031187.1 2156 2369 +
Chr1	stalkie_big_nohaplotig	CDS	165280645	165280967	.	+	1	Parent=FBgn0031187.1.mrna1;Target=FBgn0031187.1 2370 2692 +
Chr1	stalkie_big_nohaplotig	CDS	165281038	165281187	.	+	2	Parent=FBgn0031187.1.mrna1;Target=FBgn0031187.1 2693 2842 +
Chr1	stalkie_big_nohaplotig	CDS	165281337	165281415	.	+	2	Parent=FBgn0031187.1.mrna1;Target=FBgn0031187.1 2843 2921 +
Chr1	stalkie_big_nohaplotig	CDS	165281470	165281539	.	+	1	Parent=FBgn0031187.1.mrna1;Target=FBgn0031187.1 2922 2991 +
Chr1	gffcl	locus	165282650	165287403	.	.	.	ID=RLOC_00013483;geneIDs=FBgn0029690.1.path1,comp143916_c0_seq1.path1;transcripts=FBgn0029690.1.mrna1,comp143916_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165282650	165287403	.	-	.	ID=FBgn0029690.1.mrna1;geneID=FBgn0029690.1.path1;Name=FBgn0029690.1;Dir=sensecoverage=100.0;identity=99.0;matches=1793;mismatches=19;indels=0;unknowns=0;locus=RLOC_00013483
Chr1	stalkie_big_nohaplotig	exon	165282650	165282851	99	-	.	Parent=FBgn0029690.1.mrna1;Target=FBgn0029690.1 1611 1812 +
Chr1	stalkie_big_nohaplotig	exon	165284997	165285132	98	-	.	Parent=FBgn0029690.1.mrna1;Target=FBgn0029690.1 1475 1610 +
Chr1	stalkie_big_nohaplotig	exon	165285245	165285416	98	-	.	Parent=FBgn0029690.1.mrna1;Target=FBgn0029690.1 1303 1474 +
Chr1	stalkie_big_nohaplotig	exon	165285471	165285818	98	-	.	Parent=FBgn0029690.1.mrna1;Target=FBgn0029690.1 955 1302 +
Chr1	stalkie_big_nohaplotig	exon	165285878	165286080	99	-	.	Parent=FBgn0029690.1.mrna1;Target=FBgn0029690.1 752 954 +
Chr1	stalkie_big_nohaplotig	exon	165286137	165286476	99	-	.	Parent=FBgn0029690.1.mrna1;Target=FBgn0029690.1 412 751 +
Chr1	stalkie_big_nohaplotig	exon	165286542	165286685	100	-	.	Parent=FBgn0029690.1.mrna1;Target=FBgn0029690.1 268 411 +
Chr1	stalkie_big_nohaplotig	exon	165287137	165287403	98	-	.	Parent=FBgn0029690.1.mrna1;Target=FBgn0029690.1 1 267 +
Chr1	stalkie_big_nohaplotig	CDS	165282650	165282851	.	-	1	Parent=FBgn0029690.1.mrna1;Target=FBgn0029690.1 1611 1812 +
Chr1	stalkie_big_nohaplotig	CDS	165284997	165285132	.	-	2	Parent=FBgn0029690.1.mrna1;Target=FBgn0029690.1 1475 1610 +
Chr1	stalkie_big_nohaplotig	CDS	165285245	165285416	.	-	0	Parent=FBgn0029690.1.mrna1;Target=FBgn0029690.1 1303 1474 +
Chr1	stalkie_big_nohaplotig	CDS	165285471	165285818	.	-	0	Parent=FBgn0029690.1.mrna1;Target=FBgn0029690.1 955 1302 +
Chr1	stalkie_big_nohaplotig	CDS	165285878	165286080	.	-	2	Parent=FBgn0029690.1.mrna1;Target=FBgn0029690.1 752 954 +
Chr1	stalkie_big_nohaplotig	CDS	165286137	165286476	.	-	0	Parent=FBgn0029690.1.mrna1;Target=FBgn0029690.1 412 751 +
Chr1	stalkie_big_nohaplotig	CDS	165286542	165286685	.	-	0	Parent=FBgn0029690.1.mrna1;Target=FBgn0029690.1 268 411 +
Chr1	stalkie_big_nohaplotig	CDS	165287137	165287403	.	-	0	Parent=FBgn0029690.1.mrna1;Target=FBgn0029690.1 1 267 +
Chr1	stalkie_big_nohaplotig	mRNA	165286664	165287159	.	+	.	ID=comp143916_c0_seq1.mrna1;geneID=comp143916_c0_seq1.path1;Name=comp143916_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=492;mismatches=4;indels=0;unknowns=0;Target=comp143916_c0_seq1 496 1 .;CDS_Target=comp143916_c0_seq1 290 201 .;locus=RLOC_00013483
Chr1	stalkie_big_nohaplotig	exon	165286664	165287159	99	+	.	Parent=comp143916_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165286864	165286953	.	+	0	Parent=comp143916_c0_seq1.mrna1
Chr1	gffcl	locus	165288500	165289233	.	-	.	ID=RLOC_00013484;geneIDs=comp143008_c0_seq1.path1;transcripts=comp143008_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165288500	165289233	.	-	.	ID=comp143008_c0_seq1.mrna1;geneID=comp143008_c0_seq1.path1;Name=comp143008_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=717;mismatches=17;indels=0;unknowns=0;Target=comp143008_c0_seq1 734 1 .;CDS_Target=comp143008_c0_seq1 664 527 .;locus=RLOC_00013484
Chr1	stalkie_big_nohaplotig	exon	165288500	165289233	97	-	.	Parent=comp143008_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165288570	165288707	.	-	0	Parent=comp143008_c0_seq1.mrna1
Chr1	gffcl	locus	165291324	165292042	.	+	.	ID=RLOC_00013485;geneIDs=comp152483_c0_seq1.path1;transcripts=comp152483_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165291324	165292042	.	+	.	ID=comp152483_c0_seq1.mrna1;geneID=comp152483_c0_seq1.path1;Name=comp152483_c0_seq1;Dir=antisensecoverage=99.1;identity=98.3;matches=654;mismatches=1;indels=10;unknowns=0;locus=RLOC_00013485
Chr1	stalkie_big_nohaplotig	exon	165291324	165291409	100	+	.	Parent=comp152483_c0_seq1.mrna1;Target=comp152483_c0_seq1 586 671 -
Chr1	stalkie_big_nohaplotig	exon	165291474	165292042	98	+	.	Parent=comp152483_c0_seq1.mrna1;Target=comp152483_c0_seq1 7 585 -
Chr1	stalkie_big_nohaplotig	CDS	165291326	165291409	.	+	0	Parent=comp152483_c0_seq1.mrna1;Target=comp152483_c0_seq1 586 669 .
Chr1	stalkie_big_nohaplotig	CDS	165291474	165291503	.	+	0	Parent=comp152483_c0_seq1.mrna1;Target=comp152483_c0_seq1 556 585 .
Chr1	gffcl	locus	165322978	165323106	.	+	.	ID=RLOC_00013486;geneIDs=FBgn0037031.1.path2;transcripts=FBgn0037031.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	165322978	165323106	.	+	.	ID=FBgn0037031.1.mrna2;geneID=FBgn0037031.1.path2;Name=FBgn0037031.1;Dir=indeterminatecoverage=8.3;identity=98.4;matches=127;mismatches=2;indels=0;unknowns=0;Target=FBgn0037031.1 1554 1426 .;locus=RLOC_00013486
Chr1	stalkie_big_nohaplotig	exon	165322978	165323106	98	+	.	Parent=FBgn0037031.1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	165322978	165323106	.	+	0	Parent=FBgn0037031.1.mrna2
Chr1	gffcl	locus	165323472	165324037	.	-	.	ID=RLOC_00013487;geneIDs=comp149336_c0_seq1.path1;transcripts=comp149336_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165323472	165324037	.	-	.	ID=comp149336_c0_seq1.mrna1;geneID=comp149336_c0_seq1.path1;Name=comp149336_c0_seq1;Dir=indeterminatecoverage=98.6;identity=98.6;matches=559;mismatches=6;indels=2;unknowns=0;Target=comp149336_c0_seq1 574 9 .;CDS_Target=comp149336_c0_seq1 421 359 .;locus=RLOC_00013487
Chr1	stalkie_big_nohaplotig	exon	165323472	165324037	98	-	.	Parent=comp149336_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165323625	165323687	.	-	0	Parent=comp149336_c0_seq1.mrna1
Chr1	gffcl	locus	165325815	165328775	.	+	.	ID=RLOC_00013488;geneIDs=comp162692_c0_seq1.path1;transcripts=comp162692_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165325815	165328775	.	+	.	ID=comp162692_c0_seq1.mrna1;geneID=comp162692_c0_seq1.path1;Name=comp162692_c0_seq1;Dir=indeterminatecoverage=100.0;identity=86.6;matches=2705;mismatches=210;indels=209;unknowns=0;Target=comp162692_c0_seq1 3079 2 .;CDS_Target=comp162692_c0_seq1 545 447 .;locus=RLOC_00013488
Chr1	stalkie_big_nohaplotig	exon	165325815	165328775	86	+	.	Parent=comp162692_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165326206	165326299	.	+	0	Parent=comp162692_c0_seq1.mrna1
Chr1	gffcl	locus	165329281	165356196	.	-	.	ID=RLOC_00013489;geneIDs=FBgn0052432.1.path1;transcripts=FBgn0052432.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165329281	165356196	.	-	.	ID=FBgn0052432.1.mrna1;geneID=FBgn0052432.1.path1;Name=FBgn0052432.1;Dir=sensecoverage=67.2;identity=99.4;matches=2609;mismatches=16;indels=0;unknowns=1;locus=RLOC_00013489
Chr1	stalkie_big_nohaplotig	exon	165329281	165329383	100	-	.	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 3804 3906 +
Chr1	stalkie_big_nohaplotig	exon	165329449	165329650	99	-	.	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 3602 3803 +
Chr1	stalkie_big_nohaplotig	exon	165329716	165329922	99	-	.	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 3395 3601 +
Chr1	stalkie_big_nohaplotig	exon	165329976	165330159	98	-	.	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 3211 3394 +
Chr1	stalkie_big_nohaplotig	exon	165330218	165330484	99	-	.	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 2944 3210 +
Chr1	stalkie_big_nohaplotig	exon	165330555	165330888	99	-	.	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 2610 2943 +
Chr1	stalkie_big_nohaplotig	exon	165331001	165331216	99	-	.	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 2394 2609 +
Chr1	stalkie_big_nohaplotig	exon	165331283	165331689	99	-	.	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 1987 2393 +
Chr1	stalkie_big_nohaplotig	exon	165332373	165332564	100	-	.	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 1795 1986 +
Chr1	stalkie_big_nohaplotig	exon	165349393	165349566	100	-	.	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 1621 1794 +
Chr1	stalkie_big_nohaplotig	exon	165355681	165355811	100	-	.	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 1490 1620 +
Chr1	stalkie_big_nohaplotig	exon	165355988	165356196	100	-	.	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 1281 1489 +
Chr1	stalkie_big_nohaplotig	CDS	165329281	165329383	.	-	1	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 3804 3906 +
Chr1	stalkie_big_nohaplotig	CDS	165329449	165329650	.	-	2	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 3602 3803 +
Chr1	stalkie_big_nohaplotig	CDS	165329716	165329922	.	-	2	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 3395 3601 +
Chr1	stalkie_big_nohaplotig	CDS	165329976	165330159	.	-	0	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 3211 3394 +
Chr1	stalkie_big_nohaplotig	CDS	165330218	165330484	.	-	0	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 2944 3210 +
Chr1	stalkie_big_nohaplotig	CDS	165330555	165330888	.	-	1	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 2610 2943 +
Chr1	stalkie_big_nohaplotig	CDS	165331001	165331216	.	-	1	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 2394 2609 +
Chr1	stalkie_big_nohaplotig	CDS	165331283	165331689	.	-	0	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 1987 2393 +
Chr1	stalkie_big_nohaplotig	CDS	165332373	165332564	.	-	0	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 1795 1986 +
Chr1	stalkie_big_nohaplotig	CDS	165349393	165349566	.	-	0	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 1621 1794 +
Chr1	stalkie_big_nohaplotig	CDS	165355681	165355811	.	-	2	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 1490 1620 +
Chr1	stalkie_big_nohaplotig	CDS	165355988	165356195	.	-	0	Parent=FBgn0052432.1.mrna1;Target=FBgn0052432.1 1282 1489 +
Chr1	gffcl	locus	165337444	165337932	.	+	.	ID=RLOC_00013490;geneIDs=comp156164_c0_seq1.path1;transcripts=comp156164_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165337444	165337932	.	+	.	ID=comp156164_c0_seq1.mrna1;geneID=comp156164_c0_seq1.path1;Name=comp156164_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.0;matches=479;mismatches=10;indels=5;unknowns=0;Target=comp156164_c0_seq1 494 1 .;CDS_Target=comp156164_c0_seq1 47 3 .;locus=RLOC_00013490
Chr1	stalkie_big_nohaplotig	exon	165337444	165337932	96	+	.	Parent=comp156164_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165337446	165337490	.	+	0	Parent=comp156164_c0_seq1.mrna1
Chr1	gffcl	locus	165419322	165419611	.	-	.	ID=RLOC_00013491;geneIDs=comp147371_c0_seq1.path1;transcripts=comp147371_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165419322	165419611	.	-	.	ID=comp147371_c0_seq1.mrna1;geneID=comp147371_c0_seq1.path1;Name=comp147371_c0_seq1;Dir=indeterminatecoverage=79.5;identity=98.6;matches=287;mismatches=3;indels=1;unknowns=0;Target=comp147371_c0_seq1 366 76 .;CDS_Target=comp147371_c0_seq1 289 77 .;locus=RLOC_00013491
Chr1	stalkie_big_nohaplotig	exon	165419322	165419611	98	-	.	Parent=comp147371_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165419399	165419610	.	-	0	Parent=comp147371_c0_seq1.mrna1
Chr1	gffcl	locus	165428621	165436477	.	+	.	ID=RLOC_00013492;geneIDs=FBgn0263772.path1;transcripts=FBgn0263772.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165428621	165436477	.	+	.	ID=FBgn0263772.mrna1;geneID=FBgn0263772.path1;Name=FBgn0263772;Dir=sensecoverage=100.0;identity=99.3;matches=2265;mismatches=9;indels=6;unknowns=0;locus=RLOC_00013492
Chr1	stalkie_big_nohaplotig	exon	165428621	165428886	100	+	.	Parent=FBgn0263772.mrna1;Target=FBgn0263772 1 266 +
Chr1	stalkie_big_nohaplotig	exon	165428955	165429217	100	+	.	Parent=FBgn0263772.mrna1;Target=FBgn0263772 267 529 +
Chr1	stalkie_big_nohaplotig	exon	165429349	165429589	99	+	.	Parent=FBgn0263772.mrna1;Target=FBgn0263772 530 770 +
Chr1	stalkie_big_nohaplotig	exon	165430442	165430636	100	+	.	Parent=FBgn0263772.mrna1;Target=FBgn0263772 771 965 +
Chr1	stalkie_big_nohaplotig	exon	165430698	165430760	100	+	.	Parent=FBgn0263772.mrna1;Target=FBgn0263772 966 1028 +
Chr1	stalkie_big_nohaplotig	exon	165430820	165430932	99	+	.	Parent=FBgn0263772.mrna1;Target=FBgn0263772 1029 1141 +
Chr1	stalkie_big_nohaplotig	exon	165431008	165431088	100	+	.	Parent=FBgn0263772.mrna1;Target=FBgn0263772 1142 1222 +
Chr1	stalkie_big_nohaplotig	exon	165431665	165431963	99	+	.	Parent=FBgn0263772.mrna1;Target=FBgn0263772 1223 1521 +
Chr1	stalkie_big_nohaplotig	exon	165435722	165436477	98	+	.	Parent=FBgn0263772.mrna1;Target=FBgn0263772 1522 2277 +
Chr1	stalkie_big_nohaplotig	CDS	165428621	165428886	.	+	0	Parent=FBgn0263772.mrna1;Target=FBgn0263772 1 266 +
Chr1	stalkie_big_nohaplotig	CDS	165428955	165429217	.	+	1	Parent=FBgn0263772.mrna1;Target=FBgn0263772 267 529 +
Chr1	stalkie_big_nohaplotig	CDS	165429349	165429589	.	+	2	Parent=FBgn0263772.mrna1;Target=FBgn0263772 530 770 +
Chr1	stalkie_big_nohaplotig	CDS	165430442	165430636	.	+	1	Parent=FBgn0263772.mrna1;Target=FBgn0263772 771 965 +
Chr1	stalkie_big_nohaplotig	CDS	165430698	165430760	.	+	1	Parent=FBgn0263772.mrna1;Target=FBgn0263772 966 1028 +
Chr1	stalkie_big_nohaplotig	CDS	165430820	165430932	.	+	1	Parent=FBgn0263772.mrna1;Target=FBgn0263772 1029 1141 +
Chr1	stalkie_big_nohaplotig	CDS	165431008	165431088	.	+	2	Parent=FBgn0263772.mrna1;Target=FBgn0263772 1142 1222 +
Chr1	stalkie_big_nohaplotig	CDS	165431665	165431963	.	+	2	Parent=FBgn0263772.mrna1;Target=FBgn0263772 1223 1521 +
Chr1	stalkie_big_nohaplotig	CDS	165435722	165436477	.	+	0	Parent=FBgn0263772.mrna1;Target=FBgn0263772 1522 2277 +
Chr1	gffcl	locus	165482719	165484114	.	+	.	ID=RLOC_00013493;geneIDs=comp138705_c1_seq1.path1;transcripts=comp138705_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165482719	165484114	.	+	.	ID=comp138705_c1_seq1.mrna1;geneID=comp138705_c1_seq1.path1;Name=comp138705_c1_seq1;Dir=indeterminatecoverage=99.9;identity=99.1;matches=1384;mismatches=9;indels=3;unknowns=0;Target=comp138705_c1_seq1 1393 1 .;CDS_Target=comp138705_c1_seq1 57 1 .;locus=RLOC_00013493
Chr1	stalkie_big_nohaplotig	exon	165482719	165484114	99	+	.	Parent=comp138705_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165482719	165482775	.	+	0	Parent=comp138705_c1_seq1.mrna1
Chr1	gffcl	locus	165491743	165576508	.	+	.	ID=RLOC_00013494;geneIDs=FBgn0259110.1.path1;transcripts=FBgn0259110.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165491743	165576508	.	+	.	ID=FBgn0259110.1.mrna1;geneID=FBgn0259110.1.path1;Name=FBgn0259110.1;Dir=sensecoverage=14.2;identity=100.0;matches=630;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013494
Chr1	stalkie_big_nohaplotig	exon	165491743	165491968	100	+	.	Parent=FBgn0259110.1.mrna1;Target=FBgn0259110.1 1 226 +
Chr1	stalkie_big_nohaplotig	exon	165515001	165515051	100	+	.	Parent=FBgn0259110.1.mrna1;Target=FBgn0259110.1 227 277 +
Chr1	stalkie_big_nohaplotig	exon	165548593	165548741	100	+	.	Parent=FBgn0259110.1.mrna1;Target=FBgn0259110.1 278 426 +
Chr1	stalkie_big_nohaplotig	exon	165551738	165551794	100	+	.	Parent=FBgn0259110.1.mrna1;Target=FBgn0259110.1 427 483 +
Chr1	stalkie_big_nohaplotig	exon	165569873	165569946	100	+	.	Parent=FBgn0259110.1.mrna1;Target=FBgn0259110.1 484 557 +
Chr1	stalkie_big_nohaplotig	exon	165576436	165576508	100	+	.	Parent=FBgn0259110.1.mrna1;Target=FBgn0259110.1 558 630 +
Chr1	stalkie_big_nohaplotig	CDS	165491743	165491968	.	+	0	Parent=FBgn0259110.1.mrna1;Target=FBgn0259110.1 1 226 +
Chr1	stalkie_big_nohaplotig	CDS	165515001	165515051	.	+	2	Parent=FBgn0259110.1.mrna1;Target=FBgn0259110.1 227 277 +
Chr1	stalkie_big_nohaplotig	CDS	165548593	165548741	.	+	2	Parent=FBgn0259110.1.mrna1;Target=FBgn0259110.1 278 426 +
Chr1	stalkie_big_nohaplotig	CDS	165551738	165551794	.	+	0	Parent=FBgn0259110.1.mrna1;Target=FBgn0259110.1 427 483 +
Chr1	stalkie_big_nohaplotig	CDS	165569873	165569946	.	+	0	Parent=FBgn0259110.1.mrna1;Target=FBgn0259110.1 484 557 +
Chr1	stalkie_big_nohaplotig	CDS	165576436	165576508	.	+	1	Parent=FBgn0259110.1.mrna1;Target=FBgn0259110.1 558 630 +
Chr1	gffcl	locus	165530828	165531708	.	+	.	ID=RLOC_00013495;geneIDs=comp149893_c1_seq1.path1;transcripts=comp149893_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165530828	165531708	.	+	.	ID=comp149893_c1_seq1.mrna1;geneID=comp149893_c1_seq1.path1;Name=comp149893_c1_seq1;Dir=indeterminatecoverage=99.8;identity=95.8;matches=844;mismatches=8;indels=29;unknowns=0;Target=comp149893_c1_seq1 853 2 .;CDS_Target=comp149893_c1_seq1 567 421 .;locus=RLOC_00013495
Chr1	stalkie_big_nohaplotig	exon	165530828	165531708	95	+	.	Parent=comp149893_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165531276	165531422	.	+	0	Parent=comp149893_c1_seq1.mrna1
Chr1	gffcl	locus	165601448	165621125	.	+	.	ID=RLOC_00013496;geneIDs=FBgn0031002.1.path1,FBgn0259834.1.path1,comp147391_c0_seq1.path1,comp160629_c0_seq1.path1;transcripts=FBgn0259834.1.mrna1,comp160629_c0_seq1.mrna1,comp147391_c0_seq1.mrna1,FBgn0031002.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165601448	165613530	.	+	.	ID=FBgn0259834.1.mrna1;geneID=FBgn0259834.1.path1;Name=FBgn0259834.1;Dir=sensecoverage=100.0;identity=99.7;matches=1954;mismatches=5;indels=0;unknowns=0;locus=RLOC_00013496
Chr1	stalkie_big_nohaplotig	exon	165601448	165601463	100	+	.	Parent=FBgn0259834.1.mrna1;Target=FBgn0259834.1 1 16 +
Chr1	stalkie_big_nohaplotig	exon	165611393	165611866	100	+	.	Parent=FBgn0259834.1.mrna1;Target=FBgn0259834.1 17 490 +
Chr1	stalkie_big_nohaplotig	exon	165611927	165613166	99	+	.	Parent=FBgn0259834.1.mrna1;Target=FBgn0259834.1 491 1730 +
Chr1	stalkie_big_nohaplotig	exon	165613238	165613326	100	+	.	Parent=FBgn0259834.1.mrna1;Target=FBgn0259834.1 1731 1819 +
Chr1	stalkie_big_nohaplotig	exon	165613391	165613530	100	+	.	Parent=FBgn0259834.1.mrna1;Target=FBgn0259834.1 1820 1959 +
Chr1	stalkie_big_nohaplotig	CDS	165601448	165601463	.	+	0	Parent=FBgn0259834.1.mrna1;Target=FBgn0259834.1 1 16 +
Chr1	stalkie_big_nohaplotig	CDS	165611393	165611866	.	+	2	Parent=FBgn0259834.1.mrna1;Target=FBgn0259834.1 17 490 +
Chr1	stalkie_big_nohaplotig	CDS	165611927	165613166	.	+	2	Parent=FBgn0259834.1.mrna1;Target=FBgn0259834.1 491 1730 +
Chr1	stalkie_big_nohaplotig	CDS	165613238	165613326	.	+	1	Parent=FBgn0259834.1.mrna1;Target=FBgn0259834.1 1731 1819 +
Chr1	stalkie_big_nohaplotig	CDS	165613391	165613530	.	+	2	Parent=FBgn0259834.1.mrna1;Target=FBgn0259834.1 1820 1959 +
Chr1	stalkie_big_nohaplotig	mRNA	165602752	165618910	.	+	.	ID=comp160629_c0_seq1.mrna1;geneID=comp160629_c0_seq1.path1;Name=comp160629_c0_seq1;Dir=indeterminatecoverage=41.8;identity=98.8;matches=560;mismatches=7;indels=0;unknowns=0;Target=comp160629_c0_seq1 1274 1212 .;locus=RLOC_00013496
Chr1	stalkie_big_nohaplotig	exon	165602752	165602757	100	+	.	Parent=comp160629_c0_seq1.mrna1;Target=comp160629_c0_seq1 804 799 .
Chr1	stalkie_big_nohaplotig	exon	165603465	165603472	100	+	.	Parent=comp160629_c0_seq1.mrna1;Target=comp160629_c0_seq1 819 812 .
Chr1	stalkie_big_nohaplotig	exon	165603644	165603654	81	+	.	Parent=comp160629_c0_seq1.mrna1;Target=comp160629_c0_seq1 830 820 .
Chr1	stalkie_big_nohaplotig	exon	165605379	165605380	100	+	.	Parent=comp160629_c0_seq1.mrna1;Target=comp160629_c0_seq1 832 831 .
Chr1	stalkie_big_nohaplotig	exon	165610314	165610322	88	+	.	Parent=comp160629_c0_seq1.mrna1;Target=comp160629_c0_seq1 841 833 .
Chr1	stalkie_big_nohaplotig	exon	165611459	165611463	100	+	.	Parent=comp160629_c0_seq1.mrna1;Target=comp160629_c0_seq1 846 842 .
Chr1	stalkie_big_nohaplotig	exon	165618385	165618910	99	+	.	Parent=comp160629_c0_seq1.mrna1;Target=comp160629_c0_seq1 1372 847 .
Chr1	stalkie_big_nohaplotig	CDS	165618750	165618812	.	+	0	Parent=comp160629_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165618022	165618405	.	+	.	ID=comp147391_c0_seq1.mrna1;geneID=comp147391_c0_seq1.path1;Name=comp147391_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=381;mismatches=3;indels=0;unknowns=0;Target=comp147391_c0_seq1 384 1 .;CDS_Target=comp147391_c0_seq1 195 106 .;locus=RLOC_00013496
Chr1	stalkie_big_nohaplotig	exon	165618022	165618405	99	+	.	Parent=comp147391_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165618127	165618216	.	+	0	Parent=comp147391_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165618887	165621125	.	+	.	ID=FBgn0031002.1.mrna1;geneID=FBgn0031002.1.path1;Name=FBgn0031002.1;Dir=sensecoverage=99.8;identity=99.8;matches=1980;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013496
Chr1	stalkie_big_nohaplotig	exon	165618887	165619129	99	+	.	Parent=FBgn0031002.1.mrna1;Target=FBgn0031002.1 4 246 +
Chr1	stalkie_big_nohaplotig	exon	165619198	165619324	100	+	.	Parent=FBgn0031002.1.mrna1;Target=FBgn0031002.1 247 373 +
Chr1	stalkie_big_nohaplotig	exon	165619387	165619530	100	+	.	Parent=FBgn0031002.1.mrna1;Target=FBgn0031002.1 374 517 +
Chr1	stalkie_big_nohaplotig	exon	165619596	165620912	99	+	.	Parent=FBgn0031002.1.mrna1;Target=FBgn0031002.1 518 1834 +
Chr1	stalkie_big_nohaplotig	exon	165620974	165621125	100	+	.	Parent=FBgn0031002.1.mrna1;Target=FBgn0031002.1 1835 1986 +
Chr1	stalkie_big_nohaplotig	CDS	165618887	165619129	.	+	0	Parent=FBgn0031002.1.mrna1;Target=FBgn0031002.1 4 246 +
Chr1	stalkie_big_nohaplotig	CDS	165619198	165619324	.	+	0	Parent=FBgn0031002.1.mrna1;Target=FBgn0031002.1 247 373 +
Chr1	stalkie_big_nohaplotig	CDS	165619387	165619530	.	+	2	Parent=FBgn0031002.1.mrna1;Target=FBgn0031002.1 374 517 +
Chr1	stalkie_big_nohaplotig	CDS	165619596	165620912	.	+	2	Parent=FBgn0031002.1.mrna1;Target=FBgn0031002.1 518 1834 +
Chr1	stalkie_big_nohaplotig	CDS	165620974	165621125	.	+	2	Parent=FBgn0031002.1.mrna1;Target=FBgn0031002.1 1835 1986 +
Chr1	gffcl	locus	165616183	165617256	.	+	.	ID=RLOC_00013497;geneIDs=comp149303_c0_seq1.path1;transcripts=comp149303_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165616183	165617256	.	+	.	ID=comp149303_c0_seq1.mrna1;geneID=comp149303_c0_seq1.path1;Name=comp149303_c0_seq1;Dir=indeterminatecoverage=98.4;identity=98.5;matches=1063;mismatches=11;indels=5;unknowns=0;Target=comp149303_c0_seq1 1094 16 .;CDS_Target=comp149303_c0_seq1 159 91 .;locus=RLOC_00013497
Chr1	stalkie_big_nohaplotig	exon	165616183	165617256	98	+	.	Parent=comp149303_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165616258	165616326	.	+	0	Parent=comp149303_c0_seq1.mrna1
Chr1	gffcl	locus	165649413	165652355	.	+	.	ID=RLOC_00013498;geneIDs=FBgn0030998.1.path1;transcripts=FBgn0030998.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165649413	165652355	.	+	.	ID=FBgn0030998.1.mrna1;geneID=FBgn0030998.1.path1;Name=FBgn0030998.1;Dir=sensecoverage=100.0;identity=99.6;matches=1799;mismatches=7;indels=0;unknowns=0;locus=RLOC_00013498
Chr1	stalkie_big_nohaplotig	exon	165649413	165649616	99	+	.	Parent=FBgn0030998.1.mrna1;Target=FBgn0030998.1 1 204 +
Chr1	stalkie_big_nohaplotig	exon	165649783	165650092	99	+	.	Parent=FBgn0030998.1.mrna1;Target=FBgn0030998.1 205 514 +
Chr1	stalkie_big_nohaplotig	exon	165650876	165650915	100	+	.	Parent=FBgn0030998.1.mrna1;Target=FBgn0030998.1 515 554 +
Chr1	stalkie_big_nohaplotig	exon	165650977	165651595	99	+	.	Parent=FBgn0030998.1.mrna1;Target=FBgn0030998.1 555 1173 +
Chr1	stalkie_big_nohaplotig	exon	165651652	165652000	99	+	.	Parent=FBgn0030998.1.mrna1;Target=FBgn0030998.1 1174 1522 +
Chr1	stalkie_big_nohaplotig	exon	165652072	165652355	99	+	.	Parent=FBgn0030998.1.mrna1;Target=FBgn0030998.1 1523 1806 +
Chr1	stalkie_big_nohaplotig	CDS	165649413	165649616	.	+	0	Parent=FBgn0030998.1.mrna1;Target=FBgn0030998.1 1 204 +
Chr1	stalkie_big_nohaplotig	CDS	165649783	165650092	.	+	0	Parent=FBgn0030998.1.mrna1;Target=FBgn0030998.1 205 514 +
Chr1	stalkie_big_nohaplotig	CDS	165650876	165650915	.	+	2	Parent=FBgn0030998.1.mrna1;Target=FBgn0030998.1 515 554 +
Chr1	stalkie_big_nohaplotig	CDS	165650977	165651595	.	+	1	Parent=FBgn0030998.1.mrna1;Target=FBgn0030998.1 555 1173 +
Chr1	stalkie_big_nohaplotig	CDS	165651652	165652000	.	+	0	Parent=FBgn0030998.1.mrna1;Target=FBgn0030998.1 1174 1522 +
Chr1	stalkie_big_nohaplotig	CDS	165652072	165652355	.	+	2	Parent=FBgn0030998.1.mrna1;Target=FBgn0030998.1 1523 1806 +
Chr1	stalkie_big_nohaplotig	mRNA	165655231	165655510	.	-	.	ID=comp135908_c0_seq1.mrna1;geneID=comp135908_c0_seq1.path1;Name=comp135908_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=278;mismatches=2;indels=0;unknowns=0;Target=comp135908_c0_seq1 280 1 .;CDS_Target=comp135908_c0_seq1 74 3 .;locus=RLOC_00013499
Chr1	stalkie_big_nohaplotig	exon	165655231	165655510	99	-	.	Parent=comp135908_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165655437	165655508	.	-	0	Parent=comp135908_c0_seq1.mrna1
Chr1	gffcl	locus	165661066	165661596	.	-	.	ID=RLOC_00013500;geneIDs=comp147357_c0_seq1.path1;transcripts=comp147357_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165661066	165661596	.	-	.	ID=comp147357_c0_seq1.mrna1;geneID=comp147357_c0_seq1.path1;Name=comp147357_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=521;mismatches=10;indels=0;unknowns=0;Target=comp147357_c0_seq1 531 1 .;CDS_Target=comp147357_c0_seq1 495 379 .;locus=RLOC_00013500
Chr1	stalkie_big_nohaplotig	exon	165661066	165661596	98	-	.	Parent=comp147357_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165661102	165661218	.	-	0	Parent=comp147357_c0_seq1.mrna1
Chr1	gffcl	locus	165669108	165706916	.	+	.	ID=RLOC_00013501;geneIDs=FBgn0001250.1.path1,comp160503_c0_seq1.path1;transcripts=FBgn0001250.1.mrna1,comp160503_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165669108	165706916	.	+	.	ID=FBgn0001250.1.mrna1;geneID=FBgn0001250.1.path1;Name=FBgn0001250.1;Dir=sensecoverage=100.0;identity=99.7;matches=3108;mismatches=8;indels=1;unknowns=0;locus=RLOC_00013501
Chr1	stalkie_big_nohaplotig	exon	165669108	165669337	100	+	.	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 1 230 +
Chr1	stalkie_big_nohaplotig	exon	165681529	165681653	100	+	.	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 231 355 +
Chr1	stalkie_big_nohaplotig	exon	165687187	165687284	100	+	.	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 356 453 +
Chr1	stalkie_big_nohaplotig	exon	165696350	165696476	100	+	.	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 454 580 +
Chr1	stalkie_big_nohaplotig	exon	165699879	165699940	98	+	.	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 581 642 +
Chr1	stalkie_big_nohaplotig	exon	165700444	165700492	100	+	.	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 643 691 +
Chr1	stalkie_big_nohaplotig	exon	165701736	165701810	100	+	.	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 692 766 +
Chr1	stalkie_big_nohaplotig	exon	165704325	165704719	100	+	.	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 767 1161 +
Chr1	stalkie_big_nohaplotig	exon	165704780	165705663	99	+	.	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 1162 2045 +
Chr1	stalkie_big_nohaplotig	exon	165705724	165705967	99	+	.	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 2046 2289 +
Chr1	stalkie_big_nohaplotig	exon	165706031	165706200	100	+	.	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 2290 2459 +
Chr1	stalkie_big_nohaplotig	exon	165706260	165706916	99	+	.	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 2460 3117 +
Chr1	stalkie_big_nohaplotig	CDS	165669108	165669337	.	+	0	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 1 230 +
Chr1	stalkie_big_nohaplotig	CDS	165681529	165681653	.	+	1	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 231 355 +
Chr1	stalkie_big_nohaplotig	CDS	165687187	165687284	.	+	2	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 356 453 +
Chr1	stalkie_big_nohaplotig	CDS	165696350	165696476	.	+	0	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 454 580 +
Chr1	stalkie_big_nohaplotig	CDS	165699879	165699940	.	+	2	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 581 642 +
Chr1	stalkie_big_nohaplotig	CDS	165700444	165700492	.	+	0	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 643 691 +
Chr1	stalkie_big_nohaplotig	CDS	165701736	165701810	.	+	2	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 692 766 +
Chr1	stalkie_big_nohaplotig	CDS	165704325	165704719	.	+	2	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 767 1161 +
Chr1	stalkie_big_nohaplotig	CDS	165704780	165705663	.	+	0	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 1162 2045 +
Chr1	stalkie_big_nohaplotig	CDS	165705724	165705967	.	+	1	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 2046 2289 +
Chr1	stalkie_big_nohaplotig	CDS	165706031	165706200	.	+	0	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 2290 2459 +
Chr1	stalkie_big_nohaplotig	CDS	165706260	165706916	.	+	1	Parent=FBgn0001250.1.mrna1;Target=FBgn0001250.1 2460 3117 +
Chr1	stalkie_big_nohaplotig	mRNA	165701789	165704346	.	+	.	ID=comp160503_c0_seq1.mrna1;geneID=comp160503_c0_seq1.path1;Name=comp160503_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=2535;mismatches=10;indels=71;unknowns=0;Target=comp160503_c0_seq1 2603 1 .;CDS_Target=comp160503_c0_seq1 313 122 .;locus=RLOC_00013501
Chr1	stalkie_big_nohaplotig	exon	165701789	165704346	96	+	.	Parent=comp160503_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165701910	165702101	.	+	0	Parent=comp160503_c0_seq1.mrna1
Chr1	gffcl	locus	165685041	165685749	.	-	.	ID=RLOC_00013502;geneIDs=comp1814385_c0_seq1.path1;transcripts=comp1814385_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165685041	165685749	.	-	.	ID=comp1814385_c0_seq1.mrna1;geneID=comp1814385_c0_seq1.path1;Name=comp1814385_c0_seq1;Dir=indeterminatecoverage=98.6;identity=99.9;matches=708;mismatches=1;indels=0;unknowns=0;Target=comp1814385_c0_seq1 709 1 .;CDS_Target=comp1814385_c0_seq1 594 502 .;locus=RLOC_00013502
Chr1	stalkie_big_nohaplotig	exon	165685041	165685749	99	-	.	Parent=comp1814385_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165685156	165685248	.	-	0	Parent=comp1814385_c0_seq1.mrna1
Chr1	gffcl	locus	165719804	165725651	.	+	.	ID=RLOC_00013503;geneIDs=FBgn0003218.1.path1;transcripts=FBgn0003218.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165719804	165725651	.	+	.	ID=FBgn0003218.1.mrna1;geneID=FBgn0003218.1.path1;Name=FBgn0003218.1;Dir=sensecoverage=100.0;identity=99.6;matches=3639;mismatches=15;indels=0;unknowns=0;locus=RLOC_00013503
Chr1	stalkie_big_nohaplotig	exon	165719804	165719893	100	+	.	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 1 90 +
Chr1	stalkie_big_nohaplotig	exon	165719965	165720109	100	+	.	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 91 235 +
Chr1	stalkie_big_nohaplotig	exon	165720180	165720371	98	+	.	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 236 427 +
Chr1	stalkie_big_nohaplotig	exon	165720442	165720858	99	+	.	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 428 844 +
Chr1	stalkie_big_nohaplotig	exon	165720924	165721165	99	+	.	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 845 1086 +
Chr1	stalkie_big_nohaplotig	exon	165721348	165721377	100	+	.	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 1087 1116 +
Chr1	stalkie_big_nohaplotig	exon	165721483	165721558	98	+	.	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 1117 1192 +
Chr1	stalkie_big_nohaplotig	exon	165721625	165721912	100	+	.	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 1193 1480 +
Chr1	stalkie_big_nohaplotig	exon	165721988	165722650	99	+	.	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 1481 2143 +
Chr1	stalkie_big_nohaplotig	exon	165722706	165722873	100	+	.	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 2144 2311 +
Chr1	stalkie_big_nohaplotig	exon	165722944	165723081	100	+	.	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 2312 2449 +
Chr1	stalkie_big_nohaplotig	exon	165723203	165723351	100	+	.	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 2450 2598 +
Chr1	stalkie_big_nohaplotig	exon	165723412	165724227	99	+	.	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 2599 3414 +
Chr1	stalkie_big_nohaplotig	exon	165724295	165724467	100	+	.	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 3415 3587 +
Chr1	stalkie_big_nohaplotig	exon	165725585	165725651	100	+	.	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 3588 3654 +
Chr1	stalkie_big_nohaplotig	CDS	165719804	165719893	.	+	0	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 1 90 +
Chr1	stalkie_big_nohaplotig	CDS	165719965	165720109	.	+	0	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 91 235 +
Chr1	stalkie_big_nohaplotig	CDS	165720180	165720371	.	+	2	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 236 427 +
Chr1	stalkie_big_nohaplotig	CDS	165720442	165720858	.	+	2	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 428 844 +
Chr1	stalkie_big_nohaplotig	CDS	165720924	165721165	.	+	2	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 845 1086 +
Chr1	stalkie_big_nohaplotig	CDS	165721348	165721377	.	+	0	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 1087 1116 +
Chr1	stalkie_big_nohaplotig	CDS	165721483	165721558	.	+	0	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 1117 1192 +
Chr1	stalkie_big_nohaplotig	CDS	165721625	165721912	.	+	2	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 1193 1480 +
Chr1	stalkie_big_nohaplotig	CDS	165721988	165722650	.	+	2	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 1481 2143 +
Chr1	stalkie_big_nohaplotig	CDS	165722706	165722873	.	+	2	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 2144 2311 +
Chr1	stalkie_big_nohaplotig	CDS	165722944	165723081	.	+	2	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 2312 2449 +
Chr1	stalkie_big_nohaplotig	CDS	165723203	165723351	.	+	2	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 2450 2598 +
Chr1	stalkie_big_nohaplotig	CDS	165723412	165724227	.	+	0	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 2599 3414 +
Chr1	stalkie_big_nohaplotig	CDS	165724295	165724467	.	+	0	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 3415 3587 +
Chr1	stalkie_big_nohaplotig	CDS	165725585	165725651	.	+	1	Parent=FBgn0003218.1.mrna1;Target=FBgn0003218.1 3588 3654 +
Chr1	gffcl	locus	165726476	165727067	.	+	.	ID=RLOC_00013504;geneIDs=comp159187_c0_seq1.path1;transcripts=comp159187_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165726476	165727067	.	+	.	ID=comp159187_c0_seq1.mrna1;geneID=comp159187_c0_seq1.path1;Name=comp159187_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=581;mismatches=10;indels=1;unknowns=0;Target=comp159187_c0_seq1 591 1 .;CDS_Target=comp159187_c0_seq1 372 316 .;locus=RLOC_00013504
Chr1	stalkie_big_nohaplotig	exon	165726476	165727067	98	+	.	Parent=comp159187_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165726792	165726848	.	+	0	Parent=comp159187_c0_seq1.mrna1
Chr1	gffcl	locus	165727520	165730081	.	-	.	ID=RLOC_00013505;geneIDs=comp147579_c0_seq1.path1;transcripts=comp147579_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165727520	165730081	.	-	.	ID=comp147579_c0_seq1.mrna1;geneID=comp147579_c0_seq1.path1;Name=comp147579_c0_seq1;Dir=sensecoverage=100.0;identity=92.8;matches=506;mismatches=5;indels=34;unknowns=0;Target=comp147579_c0_seq1 153 269 +;locus=RLOC_00013505
Chr1	stalkie_big_nohaplotig	exon	165727520	165727682	99	-	.	Parent=comp147579_c0_seq1.mrna1;Target=comp147579_c0_seq1 382 544 +
Chr1	stalkie_big_nohaplotig	exon	165729733	165730081	90	-	.	Parent=comp147579_c0_seq1.mrna1;Target=comp147579_c0_seq1 1 381 +
Chr1	stalkie_big_nohaplotig	CDS	165729812	165729928	.	-	0	Parent=comp147579_c0_seq1.mrna1
Chr1	gffcl	locus	165730230	165732765	.	-	.	ID=RLOC_00013506;geneIDs=comp159125_c0_seq1.path1;transcripts=comp159125_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165730230	165732765	.	-	.	ID=comp159125_c0_seq1.mrna1;geneID=comp159125_c0_seq1.path1;Name=comp159125_c0_seq1;Dir=indeterminatecoverage=99.2;identity=98.9;matches=2512;mismatches=23;indels=5;unknowns=0;Target=comp159125_c0_seq1 2558 20 .;CDS_Target=comp159125_c0_seq1 1948 1793 .;locus=RLOC_00013506
Chr1	stalkie_big_nohaplotig	exon	165730230	165732765	98	-	.	Parent=comp159125_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165730837	165730992	.	-	0	Parent=comp159125_c0_seq1.mrna1
Chr1	gffcl	locus	165738036	165740252	.	+	.	ID=RLOC_00013507;geneIDs=FBgn0029689.1.path1;transcripts=FBgn0029689.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165738036	165740252	.	+	.	ID=FBgn0029689.1.mrna1;geneID=FBgn0029689.1.path1;Name=FBgn0029689.1;Dir=sensecoverage=100.0;identity=99.8;matches=1961;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013507
Chr1	stalkie_big_nohaplotig	exon	165738036	165738303	100	+	.	Parent=FBgn0029689.1.mrna1;Target=FBgn0029689.1 1 268 +
Chr1	stalkie_big_nohaplotig	exon	165738383	165738618	100	+	.	Parent=FBgn0029689.1.mrna1;Target=FBgn0029689.1 269 504 +
Chr1	stalkie_big_nohaplotig	exon	165738679	165739428	99	+	.	Parent=FBgn0029689.1.mrna1;Target=FBgn0029689.1 505 1254 +
Chr1	stalkie_big_nohaplotig	exon	165739486	165739671	100	+	.	Parent=FBgn0029689.1.mrna1;Target=FBgn0029689.1 1255 1440 +
Chr1	stalkie_big_nohaplotig	exon	165739728	165740252	99	+	.	Parent=FBgn0029689.1.mrna1;Target=FBgn0029689.1 1441 1965 +
Chr1	stalkie_big_nohaplotig	CDS	165738036	165738303	.	+	0	Parent=FBgn0029689.1.mrna1;Target=FBgn0029689.1 1 268 +
Chr1	stalkie_big_nohaplotig	CDS	165738383	165738618	.	+	2	Parent=FBgn0029689.1.mrna1;Target=FBgn0029689.1 269 504 +
Chr1	stalkie_big_nohaplotig	CDS	165738679	165739428	.	+	0	Parent=FBgn0029689.1.mrna1;Target=FBgn0029689.1 505 1254 +
Chr1	stalkie_big_nohaplotig	CDS	165739486	165739671	.	+	0	Parent=FBgn0029689.1.mrna1;Target=FBgn0029689.1 1255 1440 +
Chr1	stalkie_big_nohaplotig	CDS	165739728	165740252	.	+	0	Parent=FBgn0029689.1.mrna1;Target=FBgn0029689.1 1441 1965 +
Chr1	gffcl	locus	165746427	165748253	.	-	.	ID=RLOC_00013508;geneIDs=FBgn0029906.1.path1;transcripts=FBgn0029906.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165746427	165748253	.	-	.	ID=FBgn0029906.1.mrna1;geneID=FBgn0029906.1.path1;Name=FBgn0029906.1;Dir=sensecoverage=100.0;identity=99.4;matches=1596;mismatches=9;indels=0;unknowns=0;locus=RLOC_00013508
Chr1	stalkie_big_nohaplotig	exon	165746427	165746895	98	-	.	Parent=FBgn0029906.1.mrna1;Target=FBgn0029906.1 1137 1605 +
Chr1	stalkie_big_nohaplotig	exon	165746954	165747064	100	-	.	Parent=FBgn0029906.1.mrna1;Target=FBgn0029906.1 1026 1136 +
Chr1	stalkie_big_nohaplotig	exon	165747119	165747381	100	-	.	Parent=FBgn0029906.1.mrna1;Target=FBgn0029906.1 763 1025 +
Chr1	stalkie_big_nohaplotig	exon	165747438	165748086	99	-	.	Parent=FBgn0029906.1.mrna1;Target=FBgn0029906.1 114 762 +
Chr1	stalkie_big_nohaplotig	exon	165748141	165748253	100	-	.	Parent=FBgn0029906.1.mrna1;Target=FBgn0029906.1 1 113 +
Chr1	stalkie_big_nohaplotig	CDS	165746427	165746895	.	-	1	Parent=FBgn0029906.1.mrna1;Target=FBgn0029906.1 1137 1605 +
Chr1	stalkie_big_nohaplotig	CDS	165746954	165747064	.	-	1	Parent=FBgn0029906.1.mrna1;Target=FBgn0029906.1 1026 1136 +
Chr1	stalkie_big_nohaplotig	CDS	165747119	165747381	.	-	0	Parent=FBgn0029906.1.mrna1;Target=FBgn0029906.1 763 1025 +
Chr1	stalkie_big_nohaplotig	CDS	165747438	165748086	.	-	1	Parent=FBgn0029906.1.mrna1;Target=FBgn0029906.1 114 762 +
Chr1	stalkie_big_nohaplotig	CDS	165748141	165748253	.	-	0	Parent=FBgn0029906.1.mrna1;Target=FBgn0029906.1 1 113 +
Chr1	gffcl	locus	165749530	165760288	.	+	.	ID=RLOC_00013509;geneIDs=FBgn0029688.1.path1;transcripts=FBgn0029688.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165749530	165760288	.	+	.	ID=FBgn0029688.1.mrna1;geneID=FBgn0029688.1.path1;Name=FBgn0029688.1;Dir=sensecoverage=100.0;identity=99.6;matches=10396;mismatches=44;indels=0;unknowns=0;locus=RLOC_00013509
Chr1	stalkie_big_nohaplotig	exon	165749530	165749637	100	+	.	Parent=FBgn0029688.1.mrna1;Target=FBgn0029688.1 1 108 +
Chr1	stalkie_big_nohaplotig	exon	165749697	165753153	99	+	.	Parent=FBgn0029688.1.mrna1;Target=FBgn0029688.1 109 3565 +
Chr1	stalkie_big_nohaplotig	exon	165753213	165759743	99	+	.	Parent=FBgn0029688.1.mrna1;Target=FBgn0029688.1 3566 10096 +
Chr1	stalkie_big_nohaplotig	exon	165759811	165759919	100	+	.	Parent=FBgn0029688.1.mrna1;Target=FBgn0029688.1 10097 10205 +
Chr1	stalkie_big_nohaplotig	exon	165759985	165760133	100	+	.	Parent=FBgn0029688.1.mrna1;Target=FBgn0029688.1 10206 10354 +
Chr1	stalkie_big_nohaplotig	exon	165760203	165760288	100	+	.	Parent=FBgn0029688.1.mrna1;Target=FBgn0029688.1 10355 10440 +
Chr1	stalkie_big_nohaplotig	CDS	165749530	165749637	.	+	0	Parent=FBgn0029688.1.mrna1;Target=FBgn0029688.1 1 108 +
Chr1	stalkie_big_nohaplotig	CDS	165749697	165753153	.	+	0	Parent=FBgn0029688.1.mrna1;Target=FBgn0029688.1 109 3565 +
Chr1	stalkie_big_nohaplotig	CDS	165753213	165759743	.	+	2	Parent=FBgn0029688.1.mrna1;Target=FBgn0029688.1 3566 10096 +
Chr1	stalkie_big_nohaplotig	CDS	165759811	165759919	.	+	2	Parent=FBgn0029688.1.mrna1;Target=FBgn0029688.1 10097 10205 +
Chr1	stalkie_big_nohaplotig	CDS	165759985	165760133	.	+	1	Parent=FBgn0029688.1.mrna1;Target=FBgn0029688.1 10206 10354 +
Chr1	stalkie_big_nohaplotig	CDS	165760203	165760288	.	+	2	Parent=FBgn0029688.1.mrna1;Target=FBgn0029688.1 10355 10440 +
Chr1	gffcl	locus	165763987	165765925	.	.	.	ID=RLOC_00013510;geneIDs=Dv_FBgn0201266.3.path3,comp158499_c0_seq1.path1;transcripts=Dv_FBgn0201266.3.mrna3,comp158499_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165763987	165765925	.	-	.	ID=Dv_FBgn0201266.3.mrna3;geneID=Dv_FBgn0201266.3.path3;Name=Dv_FBgn0201266.3;Dir=sensecoverage=99.9;identity=99.2;matches=1343;mismatches=11;indels=0;unknowns=0;locus=RLOC_00013510
Chr1	stalkie_big_nohaplotig	exon	165763987	165764085	96	-	.	Parent=Dv_FBgn0201266.3.mrna3;Target=Dv_FBgn0201266.3 1256 1354 +
Chr1	stalkie_big_nohaplotig	exon	165764487	165765031	99	-	.	Parent=Dv_FBgn0201266.3.mrna3;Target=Dv_FBgn0201266.3 711 1255 +
Chr1	stalkie_big_nohaplotig	exon	165765105	165765207	99	-	.	Parent=Dv_FBgn0201266.3.mrna3;Target=Dv_FBgn0201266.3 608 710 +
Chr1	stalkie_big_nohaplotig	exon	165765262	165765661	99	-	.	Parent=Dv_FBgn0201266.3.mrna3;Target=Dv_FBgn0201266.3 208 607 +
Chr1	stalkie_big_nohaplotig	exon	165765719	165765925	99	-	.	Parent=Dv_FBgn0201266.3.mrna3;Target=Dv_FBgn0201266.3 1 207 +
Chr1	stalkie_big_nohaplotig	CDS	165763988	165764085	.	-	2	Parent=Dv_FBgn0201266.3.mrna3;Target=Dv_FBgn0201266.3 1256 1353 +
Chr1	stalkie_big_nohaplotig	CDS	165764487	165765031	.	-	1	Parent=Dv_FBgn0201266.3.mrna3;Target=Dv_FBgn0201266.3 711 1255 +
Chr1	stalkie_big_nohaplotig	CDS	165765105	165765207	.	-	2	Parent=Dv_FBgn0201266.3.mrna3;Target=Dv_FBgn0201266.3 608 710 +
Chr1	stalkie_big_nohaplotig	CDS	165765262	165765661	.	-	0	Parent=Dv_FBgn0201266.3.mrna3;Target=Dv_FBgn0201266.3 208 607 +
Chr1	stalkie_big_nohaplotig	CDS	165765719	165765925	.	-	0	Parent=Dv_FBgn0201266.3.mrna3;Target=Dv_FBgn0201266.3 1 207 +
Chr1	stalkie_big_nohaplotig	mRNA	165764062	165764508	.	+	.	ID=comp158499_c0_seq1.mrna1;geneID=comp158499_c0_seq1.path1;Name=comp158499_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=436;mismatches=9;indels=5;unknowns=0;Target=comp158499_c0_seq1 448 1 .;CDS_Target=comp158499_c0_seq1 287 162 .;locus=RLOC_00013510
Chr1	stalkie_big_nohaplotig	exon	165764062	165764508	96	+	.	Parent=comp158499_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165764223	165764348	.	+	0	Parent=comp158499_c0_seq1.mrna1
Chr1	gffcl	locus	165767009	165809184	.	+	.	ID=RLOC_00013511;geneIDs=FBgn0010315.1.path1;transcripts=FBgn0010315.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165767009	165809184	.	+	.	ID=FBgn0010315.1.mrna1;geneID=FBgn0010315.1.path1;Name=FBgn0010315.1;Dir=sensecoverage=100.0;identity=99.8;matches=1392;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013511
Chr1	stalkie_big_nohaplotig	exon	165767009	165767653	99	+	.	Parent=FBgn0010315.1.mrna1;Target=FBgn0010315.1 1 645 +
Chr1	stalkie_big_nohaplotig	exon	165790915	165791136	100	+	.	Parent=FBgn0010315.1.mrna1;Target=FBgn0010315.1 646 867 +
Chr1	stalkie_big_nohaplotig	exon	165804662	165804836	100	+	.	Parent=FBgn0010315.1.mrna1;Target=FBgn0010315.1 868 1042 +
Chr1	stalkie_big_nohaplotig	exon	165807986	165808131	100	+	.	Parent=FBgn0010315.1.mrna1;Target=FBgn0010315.1 1043 1188 +
Chr1	stalkie_big_nohaplotig	exon	165808978	165809184	99	+	.	Parent=FBgn0010315.1.mrna1;Target=FBgn0010315.1 1189 1395 +
Chr1	stalkie_big_nohaplotig	CDS	165767009	165767653	.	+	0	Parent=FBgn0010315.1.mrna1;Target=FBgn0010315.1 1 645 +
Chr1	stalkie_big_nohaplotig	CDS	165790915	165791136	.	+	0	Parent=FBgn0010315.1.mrna1;Target=FBgn0010315.1 646 867 +
Chr1	stalkie_big_nohaplotig	CDS	165804662	165804836	.	+	0	Parent=FBgn0010315.1.mrna1;Target=FBgn0010315.1 868 1042 +
Chr1	stalkie_big_nohaplotig	CDS	165807986	165808131	.	+	2	Parent=FBgn0010315.1.mrna1;Target=FBgn0010315.1 1043 1188 +
Chr1	stalkie_big_nohaplotig	CDS	165808978	165809184	.	+	0	Parent=FBgn0010315.1.mrna1;Target=FBgn0010315.1 1189 1395 +
Chr1	gffcl	locus	165815800	165816646	.	-	.	ID=RLOC_00013512;geneIDs=Dp_FBgn0243606.path6,comp163367_c4_seq1.path6;transcripts=comp163367_c4_seq1.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	165815800	165816646	.	-	.	ID=comp163367_c4_seq1.mrna6;geneID=comp163367_c4_seq1.path6;Name=comp163367_c4_seq1;Dir=indeterminatecoverage=99.9;identity=97.9;matches=829;mismatches=18;indels=0;unknowns=0;Target=comp163367_c4_seq1 847 1 .;CDS_Target=comp163367_c4_seq1 847 2 .;locus=RLOC_00013512
Chr1	stalkie_big_nohaplotig	exon	165815800	165816646	97	-	.	Parent=comp163367_c4_seq1.mrna6
Chr1	stalkie_big_nohaplotig	CDS	165815800	165816645	.	-	0	Parent=comp163367_c4_seq1.mrna6
Chr1	gffcl	locus	165821859	165822455	.	+	.	ID=RLOC_00013513;geneIDs=comp134684_c0_seq1.path1;transcripts=comp134684_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165821859	165822455	.	+	.	ID=comp134684_c0_seq1.mrna1;geneID=comp134684_c0_seq1.path1;Name=comp134684_c0_seq1;Dir=indeterminatecoverage=97.4;identity=99.5;matches=595;mismatches=2;indels=1;unknowns=0;Target=comp134684_c0_seq1 613 16 .;CDS_Target=comp134684_c0_seq1 329 258 .;locus=RLOC_00013513
Chr1	stalkie_big_nohaplotig	exon	165821859	165822455	99	+	.	Parent=comp134684_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165822100	165822171	.	+	0	Parent=comp134684_c0_seq1.mrna1
Chr1	gffcl	locus	165825172	165826046	.	+	.	ID=RLOC_00013514;geneIDs=comp118248_c0_seq1.path1,comp149797_c0_seq1.path1;transcripts=comp149797_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165825532	165826046	.	+	.	ID=comp149797_c0_seq1.mrna1;geneID=comp149797_c0_seq1.path1;Name=comp149797_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.0;matches=510;mismatches=5;indels=0;unknowns=0;Target=comp149797_c0_seq1 515 1 .;CDS_Target=comp149797_c0_seq1 34 2 .;locus=RLOC_00013514
Chr1	stalkie_big_nohaplotig	exon	165825532	165826046	99	+	.	Parent=comp149797_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165825533	165825565	.	+	0	Parent=comp149797_c0_seq1.mrna1
Chr1	gffcl	locus	165826369	165826903	.	-	.	ID=RLOC_00013515;geneIDs=comp119233_c0_seq1.path1;transcripts=comp119233_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165826369	165826903	.	-	.	ID=comp119233_c0_seq1.mrna1;geneID=comp119233_c0_seq1.path1;Name=comp119233_c0_seq1;Dir=indeterminatecoverage=97.8;identity=99.8;matches=535;mismatches=0;indels=1;unknowns=0;Target=comp119233_c0_seq1 548 13 .;CDS_Target=comp119233_c0_seq1 213 142 .;locus=RLOC_00013515
Chr1	stalkie_big_nohaplotig	exon	165826369	165826903	99	-	.	Parent=comp119233_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165826703	165826774	.	-	0	Parent=comp119233_c0_seq1.mrna1
Chr1	gffcl	locus	165827540	165838185	.	-	.	ID=RLOC_00013516;geneIDs=FBgn0030706.1.path1;transcripts=FBgn0030706.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165827540	165838185	.	-	.	ID=FBgn0030706.1.mrna1;geneID=FBgn0030706.1.path1;Name=FBgn0030706.1;Dir=sensecoverage=100.0;identity=99.9;matches=6357;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013516
Chr1	stalkie_big_nohaplotig	exon	165827540	165827668	100	-	.	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 6235 6363 +
Chr1	stalkie_big_nohaplotig	exon	165827761	165827918	100	-	.	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 6077 6234 +
Chr1	stalkie_big_nohaplotig	exon	165827988	165828453	99	-	.	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 5611 6076 +
Chr1	stalkie_big_nohaplotig	exon	165828517	165828634	100	-	.	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 5493 5610 +
Chr1	stalkie_big_nohaplotig	exon	165828697	165828822	100	-	.	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 5367 5492 +
Chr1	stalkie_big_nohaplotig	exon	165828888	165829279	100	-	.	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 4975 5366 +
Chr1	stalkie_big_nohaplotig	exon	165829349	165829501	100	-	.	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 4822 4974 +
Chr1	stalkie_big_nohaplotig	exon	165829561	165830058	99	-	.	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 4324 4821 +
Chr1	stalkie_big_nohaplotig	exon	165830113	165830409	100	-	.	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 4027 4323 +
Chr1	stalkie_big_nohaplotig	exon	165830468	165830745	100	-	.	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 3749 4026 +
Chr1	stalkie_big_nohaplotig	exon	165830807	165831022	100	-	.	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 3533 3748 +
Chr1	stalkie_big_nohaplotig	exon	165831082	165831500	100	-	.	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 3114 3532 +
Chr1	stalkie_big_nohaplotig	exon	165831576	165832068	99	-	.	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 2621 3113 +
Chr1	stalkie_big_nohaplotig	exon	165832135	165832685	100	-	.	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 2070 2620 +
Chr1	stalkie_big_nohaplotig	exon	165832739	165832930	100	-	.	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 1878 2069 +
Chr1	stalkie_big_nohaplotig	exon	165833057	165833178	99	-	.	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 1756 1877 +
Chr1	stalkie_big_nohaplotig	exon	165833249	165833702	100	-	.	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 1302 1755 +
Chr1	stalkie_big_nohaplotig	exon	165833776	165834829	99	-	.	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 248 1301 +
Chr1	stalkie_big_nohaplotig	exon	165837939	165838185	100	-	.	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 1 247 +
Chr1	stalkie_big_nohaplotig	CDS	165827540	165827668	.	-	0	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 6235 6363 +
Chr1	stalkie_big_nohaplotig	CDS	165827761	165827918	.	-	2	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 6077 6234 +
Chr1	stalkie_big_nohaplotig	CDS	165827988	165828453	.	-	0	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 5611 6076 +
Chr1	stalkie_big_nohaplotig	CDS	165828517	165828634	.	-	1	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 5493 5610 +
Chr1	stalkie_big_nohaplotig	CDS	165828697	165828822	.	-	1	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 5367 5492 +
Chr1	stalkie_big_nohaplotig	CDS	165828888	165829279	.	-	0	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 4975 5366 +
Chr1	stalkie_big_nohaplotig	CDS	165829349	165829501	.	-	0	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 4822 4974 +
Chr1	stalkie_big_nohaplotig	CDS	165829561	165830058	.	-	0	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 4324 4821 +
Chr1	stalkie_big_nohaplotig	CDS	165830113	165830409	.	-	0	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 4027 4323 +
Chr1	stalkie_big_nohaplotig	CDS	165830468	165830745	.	-	2	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 3749 4026 +
Chr1	stalkie_big_nohaplotig	CDS	165830807	165831022	.	-	2	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 3533 3748 +
Chr1	stalkie_big_nohaplotig	CDS	165831082	165831500	.	-	1	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 3114 3532 +
Chr1	stalkie_big_nohaplotig	CDS	165831576	165832068	.	-	2	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 2621 3113 +
Chr1	stalkie_big_nohaplotig	CDS	165832135	165832685	.	-	1	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 2070 2620 +
Chr1	stalkie_big_nohaplotig	CDS	165832739	165832930	.	-	1	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 1878 2069 +
Chr1	stalkie_big_nohaplotig	CDS	165833057	165833178	.	-	0	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 1756 1877 +
Chr1	stalkie_big_nohaplotig	CDS	165833249	165833702	.	-	1	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 1302 1755 +
Chr1	stalkie_big_nohaplotig	CDS	165833776	165834829	.	-	2	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 248 1301 +
Chr1	stalkie_big_nohaplotig	CDS	165837939	165838185	.	-	0	Parent=FBgn0030706.1.mrna1;Target=FBgn0030706.1 1 247 +
Chr1	gffcl	locus	165849537	165851629	.	-	.	ID=RLOC_00013518;geneIDs=FBgn0030707.1.path1;transcripts=FBgn0030707.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165849537	165851629	.	-	.	ID=FBgn0030707.1.mrna1;geneID=FBgn0030707.1.path1;Name=FBgn0030707.1;Dir=sensecoverage=100.0;identity=99.6;matches=1423;mismatches=5;indels=0;unknowns=0;locus=RLOC_00013518
Chr1	stalkie_big_nohaplotig	exon	165849537	165849679	98	-	.	Parent=FBgn0030707.1.mrna1;Target=FBgn0030707.1 1286 1428 +
Chr1	stalkie_big_nohaplotig	exon	165849739	165849904	100	-	.	Parent=FBgn0030707.1.mrna1;Target=FBgn0030707.1 1120 1285 +
Chr1	stalkie_big_nohaplotig	exon	165849965	165850156	99	-	.	Parent=FBgn0030707.1.mrna1;Target=FBgn0030707.1 928 1119 +
Chr1	stalkie_big_nohaplotig	exon	165850214	165850462	99	-	.	Parent=FBgn0030707.1.mrna1;Target=FBgn0030707.1 679 927 +
Chr1	stalkie_big_nohaplotig	exon	165850518	165850720	99	-	.	Parent=FBgn0030707.1.mrna1;Target=FBgn0030707.1 476 678 +
Chr1	stalkie_big_nohaplotig	exon	165850788	165850870	100	-	.	Parent=FBgn0030707.1.mrna1;Target=FBgn0030707.1 393 475 +
Chr1	stalkie_big_nohaplotig	exon	165850931	165851058	100	-	.	Parent=FBgn0030707.1.mrna1;Target=FBgn0030707.1 265 392 +
Chr1	stalkie_big_nohaplotig	exon	165851128	165851288	100	-	.	Parent=FBgn0030707.1.mrna1;Target=FBgn0030707.1 104 264 +
Chr1	stalkie_big_nohaplotig	exon	165851527	165851629	100	-	.	Parent=FBgn0030707.1.mrna1;Target=FBgn0030707.1 1 103 +
Chr1	stalkie_big_nohaplotig	CDS	165849537	165849679	.	-	2	Parent=FBgn0030707.1.mrna1;Target=FBgn0030707.1 1286 1428 +
Chr1	stalkie_big_nohaplotig	CDS	165849739	165849904	.	-	0	Parent=FBgn0030707.1.mrna1;Target=FBgn0030707.1 1120 1285 +
Chr1	stalkie_big_nohaplotig	CDS	165849965	165850156	.	-	0	Parent=FBgn0030707.1.mrna1;Target=FBgn0030707.1 928 1119 +
Chr1	stalkie_big_nohaplotig	CDS	165850214	165850462	.	-	0	Parent=FBgn0030707.1.mrna1;Target=FBgn0030707.1 679 927 +
Chr1	stalkie_big_nohaplotig	CDS	165850518	165850720	.	-	2	Parent=FBgn0030707.1.mrna1;Target=FBgn0030707.1 476 678 +
Chr1	stalkie_big_nohaplotig	CDS	165850788	165850870	.	-	1	Parent=FBgn0030707.1.mrna1;Target=FBgn0030707.1 393 475 +
Chr1	stalkie_big_nohaplotig	CDS	165850931	165851058	.	-	0	Parent=FBgn0030707.1.mrna1;Target=FBgn0030707.1 265 392 +
Chr1	stalkie_big_nohaplotig	CDS	165851128	165851288	.	-	2	Parent=FBgn0030707.1.mrna1;Target=FBgn0030707.1 104 264 +
Chr1	stalkie_big_nohaplotig	CDS	165851527	165851629	.	-	0	Parent=FBgn0030707.1.mrna1;Target=FBgn0030707.1 1 103 +
Chr1	gffcl	locus	165863522	165864937	.	-	.	ID=RLOC_00013519;geneIDs=comp150586_c0_seq1.path1;transcripts=comp150586_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165863522	165864937	.	-	.	ID=comp150586_c0_seq1.mrna1;geneID=comp150586_c0_seq1.path1;Name=comp150586_c0_seq1;Dir=antisensecoverage=97.2;identity=99.9;matches=1355;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013519
Chr1	stalkie_big_nohaplotig	exon	165863522	165864662	99	-	.	Parent=comp150586_c0_seq1.mrna1;Target=comp150586_c0_seq1 40 1180 -
Chr1	stalkie_big_nohaplotig	exon	165864723	165864937	100	-	.	Parent=comp150586_c0_seq1.mrna1;Target=comp150586_c0_seq1 1181 1395 -
Chr1	stalkie_big_nohaplotig	CDS	165864393	165864662	.	-	0	Parent=comp150586_c0_seq1.mrna1;Target=comp150586_c0_seq1 911 1180 .
Chr1	stalkie_big_nohaplotig	CDS	165864723	165864728	.	-	0	Parent=comp150586_c0_seq1.mrna1;Target=comp150586_c0_seq1 1181 1186 .
Chr1	gffcl	locus	165867809	165868173	.	-	.	ID=RLOC_00013520;geneIDs=comp134819_c0_seq1.path1;transcripts=comp134819_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165867809	165868173	.	-	.	ID=comp134819_c0_seq1.mrna1;geneID=comp134819_c0_seq1.path1;Name=comp134819_c0_seq1;Dir=antisensecoverage=76.7;identity=99.4;matches=308;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013520
Chr1	stalkie_big_nohaplotig	exon	165867809	165868078	99	-	.	Parent=comp134819_c0_seq1.mrna1;Target=comp134819_c0_seq1 11 280 -
Chr1	stalkie_big_nohaplotig	exon	165868134	165868173	97	-	.	Parent=comp134819_c0_seq1.mrna1;Target=comp134819_c0_seq1 281 320 -
Chr1	stalkie_big_nohaplotig	CDS	165867884	165868078	.	-	1	Parent=comp134819_c0_seq1.mrna1;Target=comp134819_c0_seq1 86 280 .
Chr1	stalkie_big_nohaplotig	CDS	165868134	165868173	.	-	2	Parent=comp134819_c0_seq1.mrna1;Target=comp134819_c0_seq1 281 320 .
Chr1	gffcl	locus	165869055	165869222	.	-	.	ID=RLOC_00013521;geneIDs=comp154217_c0_seq1.path2;transcripts=comp154217_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	165869055	165869222	.	-	.	ID=comp154217_c0_seq1.mrna2;geneID=comp154217_c0_seq1.path2;Name=comp154217_c0_seq1;Dir=antisensecoverage=22.7;identity=100.0;matches=105;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013521
Chr1	stalkie_big_nohaplotig	exon	165869055	165869096	100	-	.	Parent=comp154217_c0_seq1.mrna2;Target=comp154217_c0_seq1 357 398 -
Chr1	stalkie_big_nohaplotig	exon	165869160	165869222	100	-	.	Parent=comp154217_c0_seq1.mrna2;Target=comp154217_c0_seq1 399 461 -
Chr1	stalkie_big_nohaplotig	CDS	165869055	165869096	.	-	2	Parent=comp154217_c0_seq1.mrna2;Target=comp154217_c0_seq1 357 398 .
Chr1	stalkie_big_nohaplotig	CDS	165869160	165869222	.	-	2	Parent=comp154217_c0_seq1.mrna2;Target=comp154217_c0_seq1 399 461 .
Chr1	gffcl	locus	165871006	165871361	.	-	.	ID=RLOC_00013522;geneIDs=comp154217_c0_seq1.path1;transcripts=comp154217_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165871006	165871361	.	-	.	ID=comp154217_c0_seq1.mrna1;geneID=comp154217_c0_seq1.path1;Name=comp154217_c0_seq1;Dir=indeterminatecoverage=77.1;identity=100.0;matches=356;mismatches=0;indels=0;unknowns=0;Target=comp154217_c0_seq1 356 1 .;CDS_Target=comp154217_c0_seq1 356 351 .;locus=RLOC_00013522
Chr1	stalkie_big_nohaplotig	exon	165871006	165871361	100	-	.	Parent=comp154217_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165871006	165871011	.	-	0	Parent=comp154217_c0_seq1.mrna1
Chr1	gffcl	locus	165872889	165873833	.	-	.	ID=RLOC_00013523;geneIDs=comp152523_c1_seq1.path1;transcripts=comp152523_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165872889	165873833	.	-	.	ID=comp152523_c1_seq1.mrna1;geneID=comp152523_c1_seq1.path1;Name=comp152523_c1_seq1;Dir=indeterminatecoverage=99.1;identity=98.8;matches=940;mismatches=0;indels=11;unknowns=0;Target=comp152523_c1_seq1 946 1 .;CDS_Target=comp152523_c1_seq1 836 723 .;locus=RLOC_00013523
Chr1	stalkie_big_nohaplotig	exon	165872889	165873833	98	-	.	Parent=comp152523_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165872999	165873112	.	-	0	Parent=comp152523_c1_seq1.mrna1
Chr1	gffcl	locus	165875050	165991094	.	-	.	ID=RLOC_00013524;geneIDs=comp163736_c0_seq1.path1,comp205339_c0_seq1.path1;transcripts=comp163736_c0_seq1.mrna1,comp205339_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165875050	165908303	.	-	.	ID=comp163736_c0_seq1.mrna1;geneID=comp163736_c0_seq1.path1;Name=comp163736_c0_seq1;Dir=sensecoverage=89.6;identity=97.3;matches=3861;mismatches=39;indels=68;unknowns=0;Target=comp163736_c0_seq1 1869 2042 +;locus=RLOC_00013524
Chr1	stalkie_big_nohaplotig	exon	165875050	165877700	97	-	.	Parent=comp163736_c0_seq1.mrna1;Target=comp163736_c0_seq1 1755 4397 +
Chr1	stalkie_big_nohaplotig	exon	165877997	165879269	97	-	.	Parent=comp163736_c0_seq1.mrna1;Target=comp163736_c0_seq1 496 1754 +
Chr1	stalkie_big_nohaplotig	exon	165892413	165892416	100	-	.	Parent=comp163736_c0_seq1.mrna1;Target=comp163736_c0_seq1 492 495 +
Chr1	stalkie_big_nohaplotig	exon	165899145	165899150	100	-	.	Parent=comp163736_c0_seq1.mrna1;Target=comp163736_c0_seq1 486 491 +
Chr1	stalkie_big_nohaplotig	exon	165908294	165908303	100	-	.	Parent=comp163736_c0_seq1.mrna1;Target=comp163736_c0_seq1 460 469 +
Chr1	stalkie_big_nohaplotig	CDS	165877413	165877586	.	-	0	Parent=comp163736_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165879235	165991094	.	-	.	ID=comp205339_c0_seq1.mrna1;geneID=comp205339_c0_seq1.path1;Name=comp205339_c0_seq1;Dir=indeterminatecoverage=82.4;identity=100.0;matches=225;mismatches=0;indels=0;unknowns=0;Target=comp205339_c0_seq1 121 74 .;locus=RLOC_00013524
Chr1	stalkie_big_nohaplotig	exon	165879235	165879447	100	-	.	Parent=comp205339_c0_seq1.mrna1;Target=comp205339_c0_seq1 273 61 .
Chr1	stalkie_big_nohaplotig	exon	165991083	165991094	100	-	.	Parent=comp205339_c0_seq1.mrna1;Target=comp205339_c0_seq1 60 49 .
Chr1	stalkie_big_nohaplotig	CDS	165879387	165879434	.	-	0	Parent=comp205339_c0_seq1.mrna1
Chr1	gffcl	locus	165879468	165880736	.	-	.	ID=RLOC_00013525;geneIDs=comp161938_c0_seq1.path2;transcripts=comp161938_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	165879468	165880736	.	-	.	ID=comp161938_c0_seq1.mrna2;geneID=comp161938_c0_seq1.path2;Name=comp161938_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.0;matches=1246;mismatches=17;indels=21;unknowns=0;Target=comp161938_c0_seq1 1278 1 .;CDS_Target=comp161938_c0_seq1 362 123 .;locus=RLOC_00013525
Chr1	stalkie_big_nohaplotig	exon	165879468	165880736	97	-	.	Parent=comp161938_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	165880372	165880611	.	-	0	Parent=comp161938_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	165990239	166027130	.	+	.	ID=comp162432_c4_seq1.mrna1;geneID=comp162432_c4_seq1.path1;Name=comp162432_c4_seq1;Dir=sensecoverage=99.9;identity=99.5;matches=3279;mismatches=11;indels=4;unknowns=0;locus=RLOC_00013526
Chr1	stalkie_big_nohaplotig	exon	165990239	165990748	98	+	.	Parent=comp162432_c4_seq1.mrna1;Target=comp162432_c4_seq1 1 509 +
Chr1	stalkie_big_nohaplotig	exon	165999514	165999660	99	+	.	Parent=comp162432_c4_seq1.mrna1;Target=comp162432_c4_seq1 510 656 +
Chr1	stalkie_big_nohaplotig	exon	166009217	166009966	99	+	.	Parent=comp162432_c4_seq1.mrna1;Target=comp162432_c4_seq1 657 1406 +
Chr1	stalkie_big_nohaplotig	exon	166011383	166011513	100	+	.	Parent=comp162432_c4_seq1.mrna1;Target=comp162432_c4_seq1 1407 1537 +
Chr1	stalkie_big_nohaplotig	exon	166020457	166020697	100	+	.	Parent=comp162432_c4_seq1.mrna1;Target=comp162432_c4_seq1 1538 1778 +
Chr1	stalkie_big_nohaplotig	exon	166020761	166020940	100	+	.	Parent=comp162432_c4_seq1.mrna1;Target=comp162432_c4_seq1 1779 1958 +
Chr1	stalkie_big_nohaplotig	exon	166022427	166022563	100	+	.	Parent=comp162432_c4_seq1.mrna1;Target=comp162432_c4_seq1 1959 2095 +
Chr1	stalkie_big_nohaplotig	exon	166024680	166024878	99	+	.	Parent=comp162432_c4_seq1.mrna1;Target=comp162432_c4_seq1 2096 2294 +
Chr1	stalkie_big_nohaplotig	exon	166026135	166027130	99	+	.	Parent=comp162432_c4_seq1.mrna1;Target=comp162432_c4_seq1 2295 3293 +
Chr1	stalkie_big_nohaplotig	CDS	166009814	166009966	.	+	0	Parent=comp162432_c4_seq1.mrna1;Target=comp162432_c4_seq1 1254 1406 +
Chr1	stalkie_big_nohaplotig	CDS	166011383	166011513	.	+	0	Parent=comp162432_c4_seq1.mrna1;Target=comp162432_c4_seq1 1407 1537 +
Chr1	stalkie_big_nohaplotig	CDS	166020457	166020697	.	+	1	Parent=comp162432_c4_seq1.mrna1;Target=comp162432_c4_seq1 1538 1778 +
Chr1	stalkie_big_nohaplotig	CDS	166020761	166020940	.	+	0	Parent=comp162432_c4_seq1.mrna1;Target=comp162432_c4_seq1 1779 1958 +
Chr1	stalkie_big_nohaplotig	CDS	166022427	166022563	.	+	0	Parent=comp162432_c4_seq1.mrna1;Target=comp162432_c4_seq1 1959 2095 +
Chr1	stalkie_big_nohaplotig	CDS	166024680	166024878	.	+	1	Parent=comp162432_c4_seq1.mrna1;Target=comp162432_c4_seq1 2096 2294 +
Chr1	stalkie_big_nohaplotig	CDS	166026135	166026479	.	+	0	Parent=comp162432_c4_seq1.mrna1;Target=comp162432_c4_seq1 2295 2639 +
Chr1	stalkie_big_nohaplotig	mRNA	165990725	165990989	.	+	.	ID=comp71697_c0_seq1.mrna1;geneID=comp71697_c0_seq1.path1;Name=comp71697_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=264;mismatches=1;indels=0;unknowns=0;Target=comp71697_c0_seq1 265 1 .;CDS_Target=comp71697_c0_seq1 263 165 .;locus=RLOC_00013526
Chr1	stalkie_big_nohaplotig	exon	165990725	165990989	99	+	.	Parent=comp71697_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165990889	165990987	.	+	0	Parent=comp71697_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166112792	166114787	.	-	.	ID=FBgn0030493.1.mrna1;geneID=FBgn0030493.1.path1;Name=FBgn0030493.1;Dir=sensecoverage=100.0;identity=99.9;matches=980;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013526
Chr1	stalkie_big_nohaplotig	exon	166112792	166113294	100	-	.	Parent=FBgn0030493.1.mrna1;Target=FBgn0030493.1 479 981 +
Chr1	stalkie_big_nohaplotig	exon	166113394	166113560	99	-	.	Parent=FBgn0030493.1.mrna1;Target=FBgn0030493.1 312 478 +
Chr1	stalkie_big_nohaplotig	exon	166114477	166114787	100	-	.	Parent=FBgn0030493.1.mrna1;Target=FBgn0030493.1 1 311 +
Chr1	stalkie_big_nohaplotig	CDS	166112792	166113294	.	-	2	Parent=FBgn0030493.1.mrna1;Target=FBgn0030493.1 479 981 +
Chr1	stalkie_big_nohaplotig	CDS	166113394	166113560	.	-	1	Parent=FBgn0030493.1.mrna1;Target=FBgn0030493.1 312 478 +
Chr1	stalkie_big_nohaplotig	CDS	166114477	166114787	.	-	0	Parent=FBgn0030493.1.mrna1;Target=FBgn0030493.1 1 311 +
Chr1	stalkie_big_nohaplotig	mRNA	166113842	166114500	.	+	.	ID=comp135496_c0_seq1.mrna3;geneID=comp135496_c0_seq1.path3;Name=comp135496_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=657;mismatches=2;indels=2;unknowns=0;Target=comp135496_c0_seq1 661 1 .;CDS_Target=comp135496_c0_seq1 75 1 .;locus=RLOC_00013526
Chr1	stalkie_big_nohaplotig	exon	166113842	166114500	99	+	.	Parent=comp135496_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	166113842	166113916	.	+	0	Parent=comp135496_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	166332478	166333501	.	-	.	ID=comp144034_c0_seq1.mrna1;geneID=comp144034_c0_seq1.path1;Name=comp144034_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1020;mismatches=4;indels=0;unknowns=0;Target=comp144034_c0_seq1 1024 1 .;CDS_Target=comp144034_c0_seq1 193 89 .;locus=RLOC_00013526
Chr1	stalkie_big_nohaplotig	exon	166332478	166333501	99	-	.	Parent=comp144034_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166333309	166333413	.	-	0	Parent=comp144034_c0_seq1.mrna1
Chr1	gffcl	locus	165934053	165936050	.	.	.	ID=RLOC_00013527;geneIDs=FBgn0030493.1.path2,comp116115_c0_seq1.path2,comp135496_c0_seq1.path2;transcripts=FBgn0030493.1.mrna2,comp135496_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	165934053	165936050	.	+	.	ID=FBgn0030493.1.mrna2;geneID=FBgn0030493.1.path2;Name=FBgn0030493.1;Dir=sensecoverage=100.0;identity=99.9;matches=980;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013527
Chr1	stalkie_big_nohaplotig	exon	165934053	165934363	100	+	.	Parent=FBgn0030493.1.mrna2;Target=FBgn0030493.1 1 311 +
Chr1	stalkie_big_nohaplotig	exon	165935282	165935448	99	+	.	Parent=FBgn0030493.1.mrna2;Target=FBgn0030493.1 312 478 +
Chr1	stalkie_big_nohaplotig	exon	165935548	165936050	100	+	.	Parent=FBgn0030493.1.mrna2;Target=FBgn0030493.1 479 981 +
Chr1	stalkie_big_nohaplotig	CDS	165934053	165934363	.	+	0	Parent=FBgn0030493.1.mrna2;Target=FBgn0030493.1 1 311 +
Chr1	stalkie_big_nohaplotig	CDS	165935282	165935448	.	+	1	Parent=FBgn0030493.1.mrna2;Target=FBgn0030493.1 312 478 +
Chr1	stalkie_big_nohaplotig	CDS	165935548	165936050	.	+	2	Parent=FBgn0030493.1.mrna2;Target=FBgn0030493.1 479 981 +
Chr1	stalkie_big_nohaplotig	mRNA	165934340	165935000	.	-	.	ID=comp135496_c0_seq1.mrna2;geneID=comp135496_c0_seq1.path2;Name=comp135496_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=659;mismatches=2;indels=0;unknowns=0;Target=comp135496_c0_seq1 661 1 .;CDS_Target=comp135496_c0_seq1 527 453 .;locus=RLOC_00013527
Chr1	stalkie_big_nohaplotig	exon	165934340	165935000	99	-	.	Parent=comp135496_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	165934474	165934548	.	-	0	Parent=comp135496_c0_seq1.mrna2
Chr1	gffcl	locus	165943121	165944673	.	+	.	ID=RLOC_00013528;geneIDs=FBgn0030494.1.path1;transcripts=FBgn0030494.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165943121	165944673	.	+	.	ID=FBgn0030494.1.mrna1;geneID=FBgn0030494.1.path1;Name=FBgn0030494.1;Dir=sensecoverage=100.0;identity=100.0;matches=609;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013528
Chr1	stalkie_big_nohaplotig	exon	165943121	165943607	100	+	.	Parent=FBgn0030494.1.mrna1;Target=FBgn0030494.1 1 487 +
Chr1	stalkie_big_nohaplotig	exon	165944552	165944673	100	+	.	Parent=FBgn0030494.1.mrna1;Target=FBgn0030494.1 488 609 +
Chr1	stalkie_big_nohaplotig	CDS	165943121	165943607	.	+	0	Parent=FBgn0030494.1.mrna1;Target=FBgn0030494.1 1 487 +
Chr1	stalkie_big_nohaplotig	CDS	165944552	165944673	.	+	2	Parent=FBgn0030494.1.mrna1;Target=FBgn0030494.1 488 609 +
Chr1	gffcl	locus	165967852	165968852	.	+	.	ID=RLOC_00013529;geneIDs=ORF2880.path1;transcripts=ORF2880.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165967852	165968852	.	+	.	ID=ORF2880.mrna1;geneID=ORF2880.path1;Name=ORF2880;Dir=sensecoverage=100.0;identity=99.9;matches=791;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013529
Chr1	stalkie_big_nohaplotig	exon	165967852	165968016	99	+	.	Parent=ORF2880.mrna1;Target=ORF2880 1 165 +
Chr1	stalkie_big_nohaplotig	exon	165968079	165968527	100	+	.	Parent=ORF2880.mrna1;Target=ORF2880 166 614 +
Chr1	stalkie_big_nohaplotig	exon	165968593	165968738	100	+	.	Parent=ORF2880.mrna1;Target=ORF2880 615 760 +
Chr1	stalkie_big_nohaplotig	exon	165968821	165968852	100	+	.	Parent=ORF2880.mrna1;Target=ORF2880 761 792 +
Chr1	stalkie_big_nohaplotig	CDS	165967852	165968016	.	+	0	Parent=ORF2880.mrna1;Target=ORF2880 1 165 +
Chr1	stalkie_big_nohaplotig	CDS	165968079	165968527	.	+	0	Parent=ORF2880.mrna1;Target=ORF2880 166 614 +
Chr1	stalkie_big_nohaplotig	CDS	165968593	165968738	.	+	1	Parent=ORF2880.mrna1;Target=ORF2880 615 760 +
Chr1	stalkie_big_nohaplotig	CDS	165968821	165968852	.	+	2	Parent=ORF2880.mrna1;Target=ORF2880 761 792 +
Chr1	gffcl	locus	165975287	165976227	.	+	.	ID=RLOC_00013530;geneIDs=FBgn0052633.1.path1;transcripts=FBgn0052633.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165975287	165976227	.	+	.	ID=FBgn0052633.1.mrna1;geneID=FBgn0052633.1.path1;Name=FBgn0052633.1;Dir=sensecoverage=100.0;identity=100.0;matches=864;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013530
Chr1	stalkie_big_nohaplotig	exon	165975287	165975302	100	+	.	Parent=FBgn0052633.1.mrna1;Target=FBgn0052633.1 1 16 +
Chr1	stalkie_big_nohaplotig	exon	165975380	165976227	100	+	.	Parent=FBgn0052633.1.mrna1;Target=FBgn0052633.1 17 864 +
Chr1	stalkie_big_nohaplotig	CDS	165975287	165975302	.	+	0	Parent=FBgn0052633.1.mrna1;Target=FBgn0052633.1 1 16 +
Chr1	stalkie_big_nohaplotig	CDS	165975380	165976227	.	+	2	Parent=FBgn0052633.1.mrna1;Target=FBgn0052633.1 17 864 +
Chr1	gffcl	locus	165978583	165979139	.	+	.	ID=RLOC_00013531;geneIDs=FBgn0052633.2.path1;transcripts=FBgn0052633.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	165978583	165979139	.	+	.	ID=FBgn0052633.2.mrna1;geneID=FBgn0052633.2.path1;Name=FBgn0052633.2;Dir=indeterminatecoverage=100.0;identity=97.5;matches=543;mismatches=12;indels=2;unknowns=0;Target=FBgn0052633.2 555 1 .;CDS_Target=FBgn0052633.2 128 3 .;locus=RLOC_00013531
Chr1	stalkie_big_nohaplotig	exon	165978583	165979139	97	+	.	Parent=FBgn0052633.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	165978585	165978712	.	+	0	Parent=FBgn0052633.2.mrna1
Chr1	gffcl	locus	166009775	166026476	.	+	.	ID=RLOC_00013532;geneIDs=FBgn0086674.1.path1;transcripts=FBgn0086674.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166009775	166026476	.	+	.	ID=FBgn0086674.1.mrna1;geneID=FBgn0086674.1.path1;Name=FBgn0086674.1;Dir=sensecoverage=100.0;identity=99.9;matches=1421;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013532
Chr1	stalkie_big_nohaplotig	exon	166009775	166009966	100	+	.	Parent=FBgn0086674.1.mrna1;Target=FBgn0086674.1 1 192 +
Chr1	stalkie_big_nohaplotig	exon	166011383	166011513	100	+	.	Parent=FBgn0086674.1.mrna1;Target=FBgn0086674.1 193 323 +
Chr1	stalkie_big_nohaplotig	exon	166020457	166020697	100	+	.	Parent=FBgn0086674.1.mrna1;Target=FBgn0086674.1 324 564 +
Chr1	stalkie_big_nohaplotig	exon	166020761	166020940	100	+	.	Parent=FBgn0086674.1.mrna1;Target=FBgn0086674.1 565 744 +
Chr1	stalkie_big_nohaplotig	exon	166022427	166022563	100	+	.	Parent=FBgn0086674.1.mrna1;Target=FBgn0086674.1 745 881 +
Chr1	stalkie_big_nohaplotig	exon	166024680	166024878	99	+	.	Parent=FBgn0086674.1.mrna1;Target=FBgn0086674.1 882 1080 +
Chr1	stalkie_big_nohaplotig	exon	166026135	166026476	100	+	.	Parent=FBgn0086674.1.mrna1;Target=FBgn0086674.1 1081 1422 +
Chr1	stalkie_big_nohaplotig	CDS	166009775	166009966	.	+	0	Parent=FBgn0086674.1.mrna1;Target=FBgn0086674.1 1 192 +
Chr1	stalkie_big_nohaplotig	CDS	166011383	166011513	.	+	0	Parent=FBgn0086674.1.mrna1;Target=FBgn0086674.1 193 323 +
Chr1	stalkie_big_nohaplotig	CDS	166020457	166020697	.	+	1	Parent=FBgn0086674.1.mrna1;Target=FBgn0086674.1 324 564 +
Chr1	stalkie_big_nohaplotig	CDS	166020761	166020940	.	+	0	Parent=FBgn0086674.1.mrna1;Target=FBgn0086674.1 565 744 +
Chr1	stalkie_big_nohaplotig	CDS	166022427	166022563	.	+	0	Parent=FBgn0086674.1.mrna1;Target=FBgn0086674.1 745 881 +
Chr1	stalkie_big_nohaplotig	CDS	166024680	166024878	.	+	1	Parent=FBgn0086674.1.mrna1;Target=FBgn0086674.1 882 1080 +
Chr1	stalkie_big_nohaplotig	CDS	166026135	166026476	.	+	0	Parent=FBgn0086674.1.mrna1;Target=FBgn0086674.1 1081 1422 +
Chr1	gffcl	locus	166024992	166025802	.	-	.	ID=RLOC_00013533;geneIDs=comp145707_c0_seq1.path1;transcripts=comp145707_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166024992	166025802	.	-	.	ID=comp145707_c0_seq1.mrna1;geneID=comp145707_c0_seq1.path1;Name=comp145707_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=809;mismatches=2;indels=2;unknowns=0;Target=comp145707_c0_seq1 813 1 .;CDS_Target=comp145707_c0_seq1 715 557 .;locus=RLOC_00013533
Chr1	stalkie_big_nohaplotig	exon	166024992	166025802	99	-	.	Parent=comp145707_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166025090	166025248	.	-	0	Parent=comp145707_c0_seq1.mrna1
Chr1	gffcl	locus	166027475	166029280	.	+	.	ID=RLOC_00013534;geneIDs=comp156093_c1_seq1.path1;transcripts=comp156093_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166027475	166029280	.	+	.	ID=comp156093_c1_seq1.mrna1;geneID=comp156093_c1_seq1.path1;Name=comp156093_c1_seq1;Dir=indeterminatecoverage=99.9;identity=99.0;matches=1795;mismatches=8;indels=10;unknowns=0;Target=comp156093_c1_seq1 1810 1 .;CDS_Target=comp156093_c1_seq1 598 464 .;locus=RLOC_00013534
Chr1	stalkie_big_nohaplotig	exon	166027475	166029280	99	+	.	Parent=comp156093_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166027935	166028069	.	+	0	Parent=comp156093_c1_seq1.mrna1
Chr1	gffcl	locus	166062738	166069150	.	.	.	ID=RLOC_00013535;geneIDs=FBgn0004169.1.path1,comp149079_c0_seq1.path1,comp160914_c3_seq1.path1,comp173625_c0_seq1.path1;transcripts=FBgn0004169.1.mrna1,comp173625_c0_seq1.mrna1,comp149079_c0_seq1.mrna1,comp160914_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166062738	166069150	.	-	.	ID=FBgn0004169.1.mrna1;geneID=FBgn0004169.1.path1;Name=FBgn0004169.1;Dir=sensecoverage=100.0;identity=99.9;matches=1196;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013535
Chr1	stalkie_big_nohaplotig	exon	166062738	166062976	99	-	.	Parent=FBgn0004169.1.mrna1;Target=FBgn0004169.1 959 1197 +
Chr1	stalkie_big_nohaplotig	exon	166063146	166063224	100	-	.	Parent=FBgn0004169.1.mrna1;Target=FBgn0004169.1 880 958 +
Chr1	stalkie_big_nohaplotig	exon	166064063	166064143	100	-	.	Parent=FBgn0004169.1.mrna1;Target=FBgn0004169.1 799 879 +
Chr1	stalkie_big_nohaplotig	exon	166064224	166064316	100	-	.	Parent=FBgn0004169.1.mrna1;Target=FBgn0004169.1 706 798 +
Chr1	stalkie_big_nohaplotig	exon	166064381	166064599	100	-	.	Parent=FBgn0004169.1.mrna1;Target=FBgn0004169.1 487 705 +
Chr1	stalkie_big_nohaplotig	exon	166064976	166065348	100	-	.	Parent=FBgn0004169.1.mrna1;Target=FBgn0004169.1 114 486 +
Chr1	stalkie_big_nohaplotig	exon	166066826	166066849	100	-	.	Parent=FBgn0004169.1.mrna1;Target=FBgn0004169.1 90 113 +
Chr1	stalkie_big_nohaplotig	exon	166068237	166068239	100	-	.	Parent=FBgn0004169.1.mrna1;Target=FBgn0004169.1 87 89 +
Chr1	stalkie_big_nohaplotig	exon	166068538	166068585	100	-	.	Parent=FBgn0004169.1.mrna1;Target=FBgn0004169.1 39 86 +
Chr1	stalkie_big_nohaplotig	exon	166069113	166069150	100	-	.	Parent=FBgn0004169.1.mrna1;Target=FBgn0004169.1 1 38 +
Chr1	stalkie_big_nohaplotig	CDS	166062738	166062976	.	-	2	Parent=FBgn0004169.1.mrna1;Target=FBgn0004169.1 959 1197 +
Chr1	stalkie_big_nohaplotig	CDS	166063146	166063224	.	-	0	Parent=FBgn0004169.1.mrna1;Target=FBgn0004169.1 880 958 +
Chr1	stalkie_big_nohaplotig	CDS	166064063	166064143	.	-	0	Parent=FBgn0004169.1.mrna1;Target=FBgn0004169.1 799 879 +
Chr1	stalkie_big_nohaplotig	CDS	166064224	166064316	.	-	0	Parent=FBgn0004169.1.mrna1;Target=FBgn0004169.1 706 798 +
Chr1	stalkie_big_nohaplotig	CDS	166064381	166064599	.	-	0	Parent=FBgn0004169.1.mrna1;Target=FBgn0004169.1 487 705 +
Chr1	stalkie_big_nohaplotig	CDS	166064976	166065348	.	-	1	Parent=FBgn0004169.1.mrna1;Target=FBgn0004169.1 114 486 +
Chr1	stalkie_big_nohaplotig	CDS	166066826	166066849	.	-	1	Parent=FBgn0004169.1.mrna1;Target=FBgn0004169.1 90 113 +
Chr1	stalkie_big_nohaplotig	CDS	166068237	166068239	.	-	1	Parent=FBgn0004169.1.mrna1;Target=FBgn0004169.1 87 89 +
Chr1	stalkie_big_nohaplotig	CDS	166068538	166068585	.	-	1	Parent=FBgn0004169.1.mrna1;Target=FBgn0004169.1 39 86 +
Chr1	stalkie_big_nohaplotig	CDS	166069113	166069150	.	-	0	Parent=FBgn0004169.1.mrna1;Target=FBgn0004169.1 1 38 +
Chr1	stalkie_big_nohaplotig	mRNA	166064578	166064999	.	+	.	ID=comp173625_c0_seq1.mrna1;geneID=comp173625_c0_seq1.path1;Name=comp173625_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=422;mismatches=0;indels=0;unknowns=0;Target=comp173625_c0_seq1 422 1 .;CDS_Target=comp173625_c0_seq1 373 206 .;locus=RLOC_00013535
Chr1	stalkie_big_nohaplotig	exon	166064578	166064999	100	+	.	Parent=comp173625_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166064783	166064950	.	+	0	Parent=comp173625_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166065326	166066848	.	-	.	ID=comp149079_c0_seq1.mrna1;geneID=comp149079_c0_seq1.path1;Name=comp149079_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1523;mismatches=0;indels=0;unknowns=0;Target=comp149079_c0_seq1 1523 1 .;CDS_Target=comp149079_c0_seq1 861 691 .;locus=RLOC_00013535
Chr1	stalkie_big_nohaplotig	exon	166065326	166066848	100	-	.	Parent=comp149079_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166065988	166066158	.	-	0	Parent=comp149079_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166065326	166068560	.	-	.	ID=comp160914_c3_seq1.mrna1;geneID=comp160914_c3_seq1.path1;Name=comp160914_c3_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=1755;mismatches=3;indels=0;unknowns=0;Target=comp160914_c3_seq1 1303 1440 +;locus=RLOC_00013535
Chr1	stalkie_big_nohaplotig	exon	166065326	166065348	100	-	.	Parent=comp160914_c3_seq1.mrna1;Target=comp160914_c3_seq1 1736 1758 +
Chr1	stalkie_big_nohaplotig	exon	166066826	166068560	99	-	.	Parent=comp160914_c3_seq1.mrna1;Target=comp160914_c3_seq1 1 1735 +
Chr1	stalkie_big_nohaplotig	CDS	166067121	166067258	.	-	0	Parent=comp160914_c3_seq1.mrna1
Chr1	gffcl	locus	166063346	166063900	.	-	.	ID=RLOC_00013536;geneIDs=comp115402_c0_seq1.path1;transcripts=comp115402_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166063346	166063900	.	-	.	ID=comp115402_c0_seq1.mrna1;geneID=comp115402_c0_seq1.path1;Name=comp115402_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=555;mismatches=0;indels=0;unknowns=0;Target=comp115402_c0_seq1 555 1 .;CDS_Target=comp115402_c0_seq1 227 3 .;locus=RLOC_00013536
Chr1	stalkie_big_nohaplotig	exon	166063346	166063900	100	-	.	Parent=comp115402_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166063674	166063898	.	-	0	Parent=comp115402_c0_seq1.mrna1
Chr1	gffcl	locus	166070525	166071912	.	+	.	ID=RLOC_00013537;geneIDs=comp89941_c0_seq1.path1,comp134652_c0_seq1.path1;transcripts=comp134652_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166070977	166071912	.	+	.	ID=comp134652_c0_seq1.mrna1;geneID=comp134652_c0_seq1.path1;Name=comp134652_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.3;matches=930;mismatches=2;indels=5;unknowns=0;Target=comp134652_c0_seq1 935 3 .;CDS_Target=comp134652_c0_seq1 683 408 .;locus=RLOC_00013537
Chr1	stalkie_big_nohaplotig	exon	166070977	166071912	99	+	.	Parent=comp134652_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166071382	166071657	.	+	0	Parent=comp134652_c0_seq1.mrna1
Chr1	gffcl	locus	166077768	166079265	.	+	.	ID=RLOC_00013538;geneIDs=FBgn0030789.1.path1;transcripts=FBgn0030789.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166077768	166079265	.	+	.	ID=FBgn0030789.1.mrna1;geneID=FBgn0030789.1.path1;Name=FBgn0030789.1;Dir=sensecoverage=100.0;identity=99.7;matches=1253;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013538
Chr1	stalkie_big_nohaplotig	exon	166077768	166077839	100	+	.	Parent=FBgn0030789.1.mrna1;Target=FBgn0030789.1 1 72 +
Chr1	stalkie_big_nohaplotig	exon	166077913	166078285	100	+	.	Parent=FBgn0030789.1.mrna1;Target=FBgn0030789.1 73 445 +
Chr1	stalkie_big_nohaplotig	exon	166078341	166078931	99	+	.	Parent=FBgn0030789.1.mrna1;Target=FBgn0030789.1 446 1036 +
Chr1	stalkie_big_nohaplotig	exon	166078984	166079157	99	+	.	Parent=FBgn0030789.1.mrna1;Target=FBgn0030789.1 1037 1210 +
Chr1	stalkie_big_nohaplotig	exon	166079219	166079265	97	+	.	Parent=FBgn0030789.1.mrna1;Target=FBgn0030789.1 1211 1257 +
Chr1	stalkie_big_nohaplotig	CDS	166077768	166077839	.	+	0	Parent=FBgn0030789.1.mrna1;Target=FBgn0030789.1 1 72 +
Chr1	stalkie_big_nohaplotig	CDS	166077913	166078285	.	+	0	Parent=FBgn0030789.1.mrna1;Target=FBgn0030789.1 73 445 +
Chr1	stalkie_big_nohaplotig	CDS	166078341	166078931	.	+	2	Parent=FBgn0030789.1.mrna1;Target=FBgn0030789.1 446 1036 +
Chr1	stalkie_big_nohaplotig	CDS	166078984	166079157	.	+	2	Parent=FBgn0030789.1.mrna1;Target=FBgn0030789.1 1037 1210 +
Chr1	stalkie_big_nohaplotig	CDS	166079219	166079265	.	+	2	Parent=FBgn0030789.1.mrna1;Target=FBgn0030789.1 1211 1257 +
Chr1	gffcl	locus	166079815	166080464	.	-	.	ID=RLOC_00013539;geneIDs=FBgn0030788.1.path1;transcripts=FBgn0030788.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166079815	166080464	.	-	.	ID=FBgn0030788.1.mrna1;geneID=FBgn0030788.1.path1;Name=FBgn0030788.1;Dir=sensecoverage=100.0;identity=100.0;matches=540;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013539
Chr1	stalkie_big_nohaplotig	exon	166079815	166079940	100	-	.	Parent=FBgn0030788.1.mrna1;Target=FBgn0030788.1 415 540 +
Chr1	stalkie_big_nohaplotig	exon	166079996	166080214	100	-	.	Parent=FBgn0030788.1.mrna1;Target=FBgn0030788.1 196 414 +
Chr1	stalkie_big_nohaplotig	exon	166080270	166080464	100	-	.	Parent=FBgn0030788.1.mrna1;Target=FBgn0030788.1 1 195 +
Chr1	stalkie_big_nohaplotig	CDS	166079815	166079940	.	-	0	Parent=FBgn0030788.1.mrna1;Target=FBgn0030788.1 415 540 +
Chr1	stalkie_big_nohaplotig	CDS	166079996	166080214	.	-	0	Parent=FBgn0030788.1.mrna1;Target=FBgn0030788.1 196 414 +
Chr1	stalkie_big_nohaplotig	CDS	166080270	166080464	.	-	0	Parent=FBgn0030788.1.mrna1;Target=FBgn0030788.1 1 195 +
Chr1	gffcl	locus	166096321	166098353	.	+	.	ID=RLOC_00013540;geneIDs=FBgn0024238.1.path1;transcripts=FBgn0024238.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166096321	166098353	.	+	.	ID=FBgn0024238.1.mrna1;geneID=FBgn0024238.1.path1;Name=FBgn0024238.1;Dir=sensecoverage=94.9;identity=99.8;matches=1830;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013540
Chr1	stalkie_big_nohaplotig	exon	166096321	166097431	99	+	.	Parent=FBgn0024238.1.mrna1;Target=FBgn0024238.1 100 1210 +
Chr1	stalkie_big_nohaplotig	exon	166097490	166097768	99	+	.	Parent=FBgn0024238.1.mrna1;Target=FBgn0024238.1 1211 1489 +
Chr1	stalkie_big_nohaplotig	exon	166097827	166098080	99	+	.	Parent=FBgn0024238.1.mrna1;Target=FBgn0024238.1 1490 1743 +
Chr1	stalkie_big_nohaplotig	exon	166098165	166098353	100	+	.	Parent=FBgn0024238.1.mrna1;Target=FBgn0024238.1 1744 1932 +
Chr1	stalkie_big_nohaplotig	CDS	166096321	166097431	.	+	0	Parent=FBgn0024238.1.mrna1;Target=FBgn0024238.1 100 1210 +
Chr1	stalkie_big_nohaplotig	CDS	166097490	166097768	.	+	2	Parent=FBgn0024238.1.mrna1;Target=FBgn0024238.1 1211 1489 +
Chr1	stalkie_big_nohaplotig	CDS	166097827	166098080	.	+	2	Parent=FBgn0024238.1.mrna1;Target=FBgn0024238.1 1490 1743 +
Chr1	stalkie_big_nohaplotig	CDS	166098165	166098353	.	+	0	Parent=FBgn0024238.1.mrna1;Target=FBgn0024238.1 1744 1932 +
Chr1	gffcl	locus	166104527	166106418	.	-	.	ID=RLOC_00013541;geneIDs=FBgn0031011.1.path2;transcripts=FBgn0031011.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	166104527	166106418	.	-	.	ID=FBgn0031011.1.mrna2;geneID=FBgn0031011.1.path2;Name=FBgn0031011.1;Dir=sensecoverage=95.0;identity=99.7;matches=1722;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013541
Chr1	stalkie_big_nohaplotig	exon	166104527	166104696	100	-	.	Parent=FBgn0031011.1.mrna2;Target=FBgn0031011.1 1649 1818 +
Chr1	stalkie_big_nohaplotig	exon	166104809	166105000	97	-	.	Parent=FBgn0031011.1.mrna2;Target=FBgn0031011.1 1457 1648 +
Chr1	stalkie_big_nohaplotig	exon	166105053	166106418	99	-	.	Parent=FBgn0031011.1.mrna2;Target=FBgn0031011.1 91 1456 +
Chr1	stalkie_big_nohaplotig	CDS	166104527	166104696	.	-	2	Parent=FBgn0031011.1.mrna2;Target=FBgn0031011.1 1649 1818 +
Chr1	stalkie_big_nohaplotig	CDS	166104809	166105000	.	-	2	Parent=FBgn0031011.1.mrna2;Target=FBgn0031011.1 1457 1648 +
Chr1	stalkie_big_nohaplotig	CDS	166105053	166106418	.	-	0	Parent=FBgn0031011.1.mrna2;Target=FBgn0031011.1 91 1456 +
Chr1	gffcl	locus	166119453	166120405	.	-	.	ID=RLOC_00013542;geneIDs=FBgn0030492.1.path1;transcripts=FBgn0030492.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166119453	166120405	.	-	.	ID=FBgn0030492.1.mrna1;geneID=FBgn0030492.1.path1;Name=FBgn0030492.1;Dir=sensecoverage=100.0;identity=99.4;matches=722;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013542
Chr1	stalkie_big_nohaplotig	exon	166119453	166119520	98	-	.	Parent=FBgn0030492.1.mrna1;Target=FBgn0030492.1 659 726 +
Chr1	stalkie_big_nohaplotig	exon	166119617	166119786	99	-	.	Parent=FBgn0030492.1.mrna1;Target=FBgn0030492.1 489 658 +
Chr1	stalkie_big_nohaplotig	exon	166119918	166120405	99	-	.	Parent=FBgn0030492.1.mrna1;Target=FBgn0030492.1 1 488 +
Chr1	stalkie_big_nohaplotig	CDS	166119453	166119520	.	-	2	Parent=FBgn0030492.1.mrna1;Target=FBgn0030492.1 659 726 +
Chr1	stalkie_big_nohaplotig	CDS	166119617	166119786	.	-	1	Parent=FBgn0030492.1.mrna1;Target=FBgn0030492.1 489 658 +
Chr1	stalkie_big_nohaplotig	CDS	166119918	166120405	.	-	0	Parent=FBgn0030492.1.mrna1;Target=FBgn0030492.1 1 488 +
Chr1	gffcl	locus	166123726	166125181	.	-	.	ID=RLOC_00013543;geneIDs=comp146463_c0_seq1.path1;transcripts=comp146463_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166123726	166125181	.	-	.	ID=comp146463_c0_seq1.mrna1;geneID=comp146463_c0_seq1.path1;Name=comp146463_c0_seq1;Dir=indeterminatecoverage=98.9;identity=98.9;matches=1382;mismatches=3;indels=12;unknowns=0;Target=comp146463_c0_seq1 1102 995 .;locus=RLOC_00013543
Chr1	stalkie_big_nohaplotig	exon	166123726	166124628	99	-	.	Parent=comp146463_c0_seq1.mrna1;Target=comp146463_c0_seq1 1401 499 .
Chr1	stalkie_big_nohaplotig	exon	166124688	166125181	97	-	.	Parent=comp146463_c0_seq1.mrna1;Target=comp146463_c0_seq1 498 17 .
Chr1	stalkie_big_nohaplotig	CDS	166124025	166124132	.	-	0	Parent=comp146463_c0_seq1.mrna1
Chr1	gffcl	locus	166133859	166134475	.	-	.	ID=RLOC_00013545;geneIDs=comp140934_c1_seq1.path1;transcripts=comp140934_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166133859	166134475	.	-	.	ID=comp140934_c1_seq1.mrna1;geneID=comp140934_c1_seq1.path1;Name=comp140934_c1_seq1;Dir=indeterminatecoverage=99.7;identity=98.5;matches=608;mismatches=6;indels=3;unknowns=0;Target=comp140934_c1_seq1 616 3 .;CDS_Target=comp140934_c1_seq1 431 339 .;locus=RLOC_00013545
Chr1	stalkie_big_nohaplotig	exon	166133859	166134475	98	-	.	Parent=comp140934_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166134047	166134139	.	-	0	Parent=comp140934_c1_seq1.mrna1
Chr1	gffcl	locus	166208561	166217732	.	-	.	ID=RLOC_00013546;geneIDs=FBgn0024989.1.path1;transcripts=FBgn0024989.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166208561	166217732	.	-	.	ID=FBgn0024989.1.mrna1;geneID=FBgn0024989.1.path1;Name=FBgn0024989.1;Dir=sensecoverage=100.0;identity=100.0;matches=2682;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013546
Chr1	stalkie_big_nohaplotig	exon	166208561	166208763	100	-	.	Parent=FBgn0024989.1.mrna1;Target=FBgn0024989.1 2480 2682 +
Chr1	stalkie_big_nohaplotig	exon	166208821	166209414	100	-	.	Parent=FBgn0024989.1.mrna1;Target=FBgn0024989.1 1886 2479 +
Chr1	stalkie_big_nohaplotig	exon	166209477	166209620	100	-	.	Parent=FBgn0024989.1.mrna1;Target=FBgn0024989.1 1742 1885 +
Chr1	stalkie_big_nohaplotig	exon	166209891	166211452	100	-	.	Parent=FBgn0024989.1.mrna1;Target=FBgn0024989.1 180 1741 +
Chr1	stalkie_big_nohaplotig	exon	166217108	166217161	100	-	.	Parent=FBgn0024989.1.mrna1;Target=FBgn0024989.1 126 179 +
Chr1	stalkie_big_nohaplotig	exon	166217608	166217732	100	-	.	Parent=FBgn0024989.1.mrna1;Target=FBgn0024989.1 1 125 +
Chr1	stalkie_big_nohaplotig	CDS	166208561	166208763	.	-	2	Parent=FBgn0024989.1.mrna1;Target=FBgn0024989.1 2480 2682 +
Chr1	stalkie_big_nohaplotig	CDS	166208821	166209414	.	-	2	Parent=FBgn0024989.1.mrna1;Target=FBgn0024989.1 1886 2479 +
Chr1	stalkie_big_nohaplotig	CDS	166209477	166209620	.	-	2	Parent=FBgn0024989.1.mrna1;Target=FBgn0024989.1 1742 1885 +
Chr1	stalkie_big_nohaplotig	CDS	166209891	166211452	.	-	1	Parent=FBgn0024989.1.mrna1;Target=FBgn0024989.1 180 1741 +
Chr1	stalkie_big_nohaplotig	CDS	166217108	166217161	.	-	1	Parent=FBgn0024989.1.mrna1;Target=FBgn0024989.1 126 179 +
Chr1	stalkie_big_nohaplotig	CDS	166217608	166217732	.	-	0	Parent=FBgn0024989.1.mrna1;Target=FBgn0024989.1 1 125 +
Chr1	gffcl	locus	166258314	166266365	.	+	.	ID=RLOC_00013547;geneIDs=comp160860_c0_seq1.path1;transcripts=comp160860_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166258314	166266365	.	+	.	ID=comp160860_c0_seq1.mrna1;geneID=comp160860_c0_seq1.path1;Name=comp160860_c0_seq1;Dir=sensecoverage=100.0;identity=99.2;matches=4077;mismatches=5;indels=27;unknowns=0;Target=comp160860_c0_seq1 1493 1927 +;locus=RLOC_00013547
Chr1	stalkie_big_nohaplotig	exon	166258314	166258548	100	+	.	Parent=comp160860_c0_seq1.mrna1;Target=comp160860_c0_seq1 2 236 +
Chr1	stalkie_big_nohaplotig	exon	166261410	166264004	99	+	.	Parent=comp160860_c0_seq1.mrna1;Target=comp160860_c0_seq1 237 2827 +
Chr1	stalkie_big_nohaplotig	exon	166264076	166264292	100	+	.	Parent=comp160860_c0_seq1.mrna1;Target=comp160860_c0_seq1 2828 3044 +
Chr1	stalkie_big_nohaplotig	exon	166265313	166266365	99	+	.	Parent=comp160860_c0_seq1.mrna1;Target=comp160860_c0_seq1 3045 4092 +
Chr1	stalkie_big_nohaplotig	CDS	166262671	166263104	.	+	0	Parent=comp160860_c0_seq1.mrna1
Chr1	gffcl	locus	166267108	166281595	.	+	.	ID=RLOC_00013548;geneIDs=FBgn0263968.1.path1;transcripts=FBgn0263968.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166267108	166281595	.	+	.	ID=FBgn0263968.1.mrna1;geneID=FBgn0263968.1.path1;Name=FBgn0263968.1;Dir=sensecoverage=100.0;identity=99.7;matches=9708;mismatches=23;indels=2;unknowns=0;locus=RLOC_00013548
Chr1	stalkie_big_nohaplotig	exon	166267108	166267261	100	+	.	Parent=FBgn0263968.1.mrna1;Target=FBgn0263968.1 1 154 +
Chr1	stalkie_big_nohaplotig	exon	166267326	166267734	100	+	.	Parent=FBgn0263968.1.mrna1;Target=FBgn0263968.1 155 563 +
Chr1	stalkie_big_nohaplotig	exon	166267797	166270095	99	+	.	Parent=FBgn0263968.1.mrna1;Target=FBgn0263968.1 564 2862 +
Chr1	stalkie_big_nohaplotig	exon	166270152	166273718	99	+	.	Parent=FBgn0263968.1.mrna1;Target=FBgn0263968.1 2863 6429 +
Chr1	stalkie_big_nohaplotig	exon	166277624	166277952	99	+	.	Parent=FBgn0263968.1.mrna1;Target=FBgn0263968.1 6430 6758 +
Chr1	stalkie_big_nohaplotig	exon	166278020	166278815	99	+	.	Parent=FBgn0263968.1.mrna1;Target=FBgn0263968.1 6759 7554 +
Chr1	stalkie_big_nohaplotig	exon	166278878	166279453	100	+	.	Parent=FBgn0263968.1.mrna1;Target=FBgn0263968.1 7555 8130 +
Chr1	stalkie_big_nohaplotig	exon	166279856	166280863	99	+	.	Parent=FBgn0263968.1.mrna1;Target=FBgn0263968.1 8131 9138 +
Chr1	stalkie_big_nohaplotig	exon	166280931	166281330	99	+	.	Parent=FBgn0263968.1.mrna1;Target=FBgn0263968.1 9139 9538 +
Chr1	stalkie_big_nohaplotig	exon	166281402	166281595	100	+	.	Parent=FBgn0263968.1.mrna1;Target=FBgn0263968.1 9539 9732 +
Chr1	stalkie_big_nohaplotig	CDS	166267108	166267261	.	+	0	Parent=FBgn0263968.1.mrna1;Target=FBgn0263968.1 1 154 +
Chr1	stalkie_big_nohaplotig	CDS	166267326	166267734	.	+	2	Parent=FBgn0263968.1.mrna1;Target=FBgn0263968.1 155 563 +
Chr1	stalkie_big_nohaplotig	CDS	166267797	166270095	.	+	1	Parent=FBgn0263968.1.mrna1;Target=FBgn0263968.1 564 2862 +
Chr1	stalkie_big_nohaplotig	CDS	166270152	166273718	.	+	0	Parent=FBgn0263968.1.mrna1;Target=FBgn0263968.1 2863 6429 +
Chr1	stalkie_big_nohaplotig	CDS	166277624	166277952	.	+	0	Parent=FBgn0263968.1.mrna1;Target=FBgn0263968.1 6430 6758 +
Chr1	stalkie_big_nohaplotig	CDS	166278020	166278815	.	+	1	Parent=FBgn0263968.1.mrna1;Target=FBgn0263968.1 6759 7554 +
Chr1	stalkie_big_nohaplotig	CDS	166278878	166279453	.	+	0	Parent=FBgn0263968.1.mrna1;Target=FBgn0263968.1 7555 8130 +
Chr1	stalkie_big_nohaplotig	CDS	166279856	166280863	.	+	0	Parent=FBgn0263968.1.mrna1;Target=FBgn0263968.1 8131 9138 +
Chr1	stalkie_big_nohaplotig	CDS	166280931	166281330	.	+	0	Parent=FBgn0263968.1.mrna1;Target=FBgn0263968.1 9139 9538 +
Chr1	stalkie_big_nohaplotig	CDS	166281402	166281595	.	+	2	Parent=FBgn0263968.1.mrna1;Target=FBgn0263968.1 9539 9732 +
Chr1	gffcl	locus	166274063	166276054	.	-	.	ID=RLOC_00013549;geneIDs=FBgn0029909.1.path1;transcripts=FBgn0029909.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166274063	166276054	.	-	.	ID=FBgn0029909.1.mrna1;geneID=FBgn0029909.1.path1;Name=FBgn0029909.1;Dir=sensecoverage=100.0;identity=99.9;matches=1019;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013549
Chr1	stalkie_big_nohaplotig	exon	166274063	166274311	100	-	.	Parent=FBgn0029909.1.mrna1;Target=FBgn0029909.1 772 1020 +
Chr1	stalkie_big_nohaplotig	exon	166274367	166274676	99	-	.	Parent=FBgn0029909.1.mrna1;Target=FBgn0029909.1 462 771 +
Chr1	stalkie_big_nohaplotig	exon	166275594	166276054	100	-	.	Parent=FBgn0029909.1.mrna1;Target=FBgn0029909.1 1 461 +
Chr1	stalkie_big_nohaplotig	CDS	166274063	166274311	.	-	0	Parent=FBgn0029909.1.mrna1;Target=FBgn0029909.1 772 1020 +
Chr1	stalkie_big_nohaplotig	CDS	166274367	166274676	.	-	1	Parent=FBgn0029909.1.mrna1;Target=FBgn0029909.1 462 771 +
Chr1	stalkie_big_nohaplotig	CDS	166275594	166276054	.	-	0	Parent=FBgn0029909.1.mrna1;Target=FBgn0029909.1 1 461 +
Chr1	gffcl	locus	166283644	166287038	.	+	.	ID=RLOC_00013550;geneIDs=FBgn0029912.1.path1;transcripts=FBgn0029912.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166283644	166287038	.	+	.	ID=FBgn0029912.1.mrna1;geneID=FBgn0029912.1.path1;Name=FBgn0029912.1;Dir=sensecoverage=100.0;identity=99.8;matches=2992;mismatches=5;indels=0;unknowns=0;locus=RLOC_00013550
Chr1	stalkie_big_nohaplotig	exon	166283644	166284280	99	+	.	Parent=FBgn0029912.1.mrna1;Target=FBgn0029912.1 1 637 +
Chr1	stalkie_big_nohaplotig	exon	166284334	166285137	100	+	.	Parent=FBgn0029912.1.mrna1;Target=FBgn0029912.1 638 1441 +
Chr1	stalkie_big_nohaplotig	exon	166285221	166285877	99	+	.	Parent=FBgn0029912.1.mrna1;Target=FBgn0029912.1 1442 2098 +
Chr1	stalkie_big_nohaplotig	exon	166285947	166286139	100	+	.	Parent=FBgn0029912.1.mrna1;Target=FBgn0029912.1 2099 2291 +
Chr1	stalkie_big_nohaplotig	exon	166286193	166286472	99	+	.	Parent=FBgn0029912.1.mrna1;Target=FBgn0029912.1 2292 2571 +
Chr1	stalkie_big_nohaplotig	exon	166286557	166286787	100	+	.	Parent=FBgn0029912.1.mrna1;Target=FBgn0029912.1 2572 2802 +
Chr1	stalkie_big_nohaplotig	exon	166286844	166287038	100	+	.	Parent=FBgn0029912.1.mrna1;Target=FBgn0029912.1 2803 2997 +
Chr1	stalkie_big_nohaplotig	CDS	166283644	166284280	.	+	0	Parent=FBgn0029912.1.mrna1;Target=FBgn0029912.1 1 637 +
Chr1	stalkie_big_nohaplotig	CDS	166284334	166285137	.	+	2	Parent=FBgn0029912.1.mrna1;Target=FBgn0029912.1 638 1441 +
Chr1	stalkie_big_nohaplotig	CDS	166285221	166285877	.	+	2	Parent=FBgn0029912.1.mrna1;Target=FBgn0029912.1 1442 2098 +
Chr1	stalkie_big_nohaplotig	CDS	166285947	166286139	.	+	2	Parent=FBgn0029912.1.mrna1;Target=FBgn0029912.1 2099 2291 +
Chr1	stalkie_big_nohaplotig	CDS	166286193	166286472	.	+	1	Parent=FBgn0029912.1.mrna1;Target=FBgn0029912.1 2292 2571 +
Chr1	stalkie_big_nohaplotig	CDS	166286557	166286787	.	+	0	Parent=FBgn0029912.1.mrna1;Target=FBgn0029912.1 2572 2802 +
Chr1	stalkie_big_nohaplotig	CDS	166286844	166287038	.	+	0	Parent=FBgn0029912.1.mrna1;Target=FBgn0029912.1 2803 2997 +
Chr1	gffcl	locus	166287468	166288375	.	-	.	ID=RLOC_00013551;geneIDs=FBgn0035944.1.path1;transcripts=FBgn0035944.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166287468	166288375	.	-	.	ID=FBgn0035944.1.mrna1;geneID=FBgn0035944.1.path1;Name=FBgn0035944.1;Dir=sensecoverage=100.0;identity=99.4;matches=650;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013551
Chr1	stalkie_big_nohaplotig	exon	166287468	166287773	98	-	.	Parent=FBgn0035944.1.mrna1;Target=FBgn0035944.1 349 654 +
Chr1	stalkie_big_nohaplotig	exon	166287827	166288061	100	-	.	Parent=FBgn0035944.1.mrna1;Target=FBgn0035944.1 114 348 +
Chr1	stalkie_big_nohaplotig	exon	166288123	166288205	100	-	.	Parent=FBgn0035944.1.mrna1;Target=FBgn0035944.1 31 113 +
Chr1	stalkie_big_nohaplotig	exon	166288346	166288375	100	-	.	Parent=FBgn0035944.1.mrna1;Target=FBgn0035944.1 1 30 +
Chr1	stalkie_big_nohaplotig	CDS	166287468	166287773	.	-	0	Parent=FBgn0035944.1.mrna1;Target=FBgn0035944.1 349 654 +
Chr1	stalkie_big_nohaplotig	CDS	166287827	166288061	.	-	1	Parent=FBgn0035944.1.mrna1;Target=FBgn0035944.1 114 348 +
Chr1	stalkie_big_nohaplotig	CDS	166288123	166288205	.	-	0	Parent=FBgn0035944.1.mrna1;Target=FBgn0035944.1 31 113 +
Chr1	stalkie_big_nohaplotig	CDS	166288346	166288375	.	-	0	Parent=FBgn0035944.1.mrna1;Target=FBgn0035944.1 1 30 +
Chr1	gffcl	locus	166290486	166291965	.	-	.	ID=RLOC_00013552;geneIDs=FBgn0029913.1.path1;transcripts=FBgn0029913.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166290486	166291965	.	-	.	ID=FBgn0029913.1.mrna1;geneID=FBgn0029913.1.path1;Name=FBgn0029913.1;Dir=sensecoverage=100.0;identity=99.9;matches=1298;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013552
Chr1	stalkie_big_nohaplotig	exon	166290486	166290849	99	-	.	Parent=FBgn0029913.1.mrna1;Target=FBgn0029913.1 936 1299 +
Chr1	stalkie_big_nohaplotig	exon	166290905	166291052	100	-	.	Parent=FBgn0029913.1.mrna1;Target=FBgn0029913.1 788 935 +
Chr1	stalkie_big_nohaplotig	exon	166291113	166291846	100	-	.	Parent=FBgn0029913.1.mrna1;Target=FBgn0029913.1 54 787 +
Chr1	stalkie_big_nohaplotig	exon	166291913	166291965	100	-	.	Parent=FBgn0029913.1.mrna1;Target=FBgn0029913.1 1 53 +
Chr1	stalkie_big_nohaplotig	CDS	166290486	166290849	.	-	1	Parent=FBgn0029913.1.mrna1;Target=FBgn0029913.1 936 1299 +
Chr1	stalkie_big_nohaplotig	CDS	166290905	166291052	.	-	2	Parent=FBgn0029913.1.mrna1;Target=FBgn0029913.1 788 935 +
Chr1	stalkie_big_nohaplotig	CDS	166291113	166291846	.	-	1	Parent=FBgn0029913.1.mrna1;Target=FBgn0029913.1 54 787 +
Chr1	stalkie_big_nohaplotig	CDS	166291913	166291965	.	-	0	Parent=FBgn0029913.1.mrna1;Target=FBgn0029913.1 1 53 +
Chr1	gffcl	locus	166296001	166297573	.	-	.	ID=RLOC_00013553;geneIDs=FBgn0001404.1.path1;transcripts=FBgn0001404.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166296001	166297573	.	-	.	ID=FBgn0001404.1.mrna1;geneID=FBgn0001404.1.path1;Name=FBgn0001404.1;Dir=sensecoverage=100.0;identity=99.9;matches=1388;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013553
Chr1	stalkie_big_nohaplotig	exon	166296001	166296570	100	-	.	Parent=FBgn0001404.1.mrna1;Target=FBgn0001404.1 820 1389 +
Chr1	stalkie_big_nohaplotig	exon	166296755	166297573	99	-	.	Parent=FBgn0001404.1.mrna1;Target=FBgn0001404.1 1 819 +
Chr1	stalkie_big_nohaplotig	CDS	166296001	166296570	.	-	0	Parent=FBgn0001404.1.mrna1;Target=FBgn0001404.1 820 1389 +
Chr1	stalkie_big_nohaplotig	CDS	166296755	166297573	.	-	0	Parent=FBgn0001404.1.mrna1;Target=FBgn0001404.1 1 819 +
Chr1	gffcl	locus	166303933	166304854	.	+	.	ID=RLOC_00013554;geneIDs=FBgn0039136.1.path1;transcripts=FBgn0039136.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166303933	166304854	.	+	.	ID=FBgn0039136.1.mrna1;geneID=FBgn0039136.1.path1;Name=FBgn0039136.1;Dir=sensecoverage=100.0;identity=99.7;matches=787;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013554
Chr1	stalkie_big_nohaplotig	exon	166303933	166304222	100	+	.	Parent=FBgn0039136.1.mrna1;Target=FBgn0039136.1 1 290 +
Chr1	stalkie_big_nohaplotig	exon	166304297	166304613	99	+	.	Parent=FBgn0039136.1.mrna1;Target=FBgn0039136.1 291 607 +
Chr1	stalkie_big_nohaplotig	exon	166304673	166304854	99	+	.	Parent=FBgn0039136.1.mrna1;Target=FBgn0039136.1 608 789 +
Chr1	stalkie_big_nohaplotig	CDS	166303933	166304222	.	+	0	Parent=FBgn0039136.1.mrna1;Target=FBgn0039136.1 1 290 +
Chr1	stalkie_big_nohaplotig	CDS	166304297	166304613	.	+	1	Parent=FBgn0039136.1.mrna1;Target=FBgn0039136.1 291 607 +
Chr1	stalkie_big_nohaplotig	CDS	166304673	166304854	.	+	2	Parent=FBgn0039136.1.mrna1;Target=FBgn0039136.1 608 789 +
Chr1	gffcl	locus	166306218	166308117	.	+	.	ID=RLOC_00013555;geneIDs=FBgn0029911.1.path1;transcripts=FBgn0029911.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166306218	166308117	.	+	.	ID=FBgn0029911.1.mrna1;geneID=FBgn0029911.1.path1;Name=FBgn0029911.1;Dir=sensecoverage=100.0;identity=99.9;matches=845;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013555
Chr1	stalkie_big_nohaplotig	exon	166306218	166306806	99	+	.	Parent=FBgn0029911.1.mrna1;Target=FBgn0029911.1 1 589 +
Chr1	stalkie_big_nohaplotig	exon	166307737	166307832	100	+	.	Parent=FBgn0029911.1.mrna1;Target=FBgn0029911.1 590 685 +
Chr1	stalkie_big_nohaplotig	exon	166307893	166307998	100	+	.	Parent=FBgn0029911.1.mrna1;Target=FBgn0029911.1 686 791 +
Chr1	stalkie_big_nohaplotig	exon	166308063	166308117	100	+	.	Parent=FBgn0029911.1.mrna1;Target=FBgn0029911.1 792 846 +
Chr1	stalkie_big_nohaplotig	CDS	166306218	166306806	.	+	0	Parent=FBgn0029911.1.mrna1;Target=FBgn0029911.1 1 589 +
Chr1	stalkie_big_nohaplotig	CDS	166307737	166307832	.	+	2	Parent=FBgn0029911.1.mrna1;Target=FBgn0029911.1 590 685 +
Chr1	stalkie_big_nohaplotig	CDS	166307893	166307998	.	+	2	Parent=FBgn0029911.1.mrna1;Target=FBgn0029911.1 686 791 +
Chr1	stalkie_big_nohaplotig	CDS	166308063	166308117	.	+	1	Parent=FBgn0029911.1.mrna1;Target=FBgn0029911.1 792 846 +
Chr1	gffcl	locus	166308373	166308898	.	-	.	ID=RLOC_00013556;geneIDs=comp105752_c0_seq1.path1;transcripts=comp105752_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166308373	166308898	.	-	.	ID=comp105752_c0_seq1.mrna1;geneID=comp105752_c0_seq1.path1;Name=comp105752_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=526;mismatches=0;indels=0;unknowns=0;Target=comp105752_c0_seq1 526 1 .;CDS_Target=comp105752_c0_seq1 453 358 .;locus=RLOC_00013556
Chr1	stalkie_big_nohaplotig	exon	166308373	166308898	100	-	.	Parent=comp105752_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166308446	166308541	.	-	0	Parent=comp105752_c0_seq1.mrna1
Chr1	gffcl	locus	166312017	166312951	.	-	.	ID=RLOC_00013557;geneIDs=comp142387_c0_seq1.path1;transcripts=comp142387_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166312017	166312951	.	-	.	ID=comp142387_c0_seq1.mrna1;geneID=comp142387_c0_seq1.path1;Name=comp142387_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=935;mismatches=0;indels=0;unknowns=0;Target=comp142387_c0_seq1 935 1 .;CDS_Target=comp142387_c0_seq1 569 501 .;locus=RLOC_00013557
Chr1	stalkie_big_nohaplotig	exon	166312017	166312951	100	-	.	Parent=comp142387_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166312383	166312451	.	-	0	Parent=comp142387_c0_seq1.mrna1
Chr1	gffcl	locus	166322790	166335637	.	+	.	ID=RLOC_00013558;geneIDs=FBgn0030941.1.path1;transcripts=FBgn0030941.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166322790	166335637	.	+	.	ID=FBgn0030941.1.mrna1;geneID=FBgn0030941.1.path1;Name=FBgn0030941.1;Dir=sensecoverage=90.5;identity=99.6;matches=1022;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013558
Chr1	stalkie_big_nohaplotig	exon	166322790	166323266	99	+	.	Parent=FBgn0030941.1.mrna1;Target=FBgn0030941.1 109 585 +
Chr1	stalkie_big_nohaplotig	exon	166323325	166323441	98	+	.	Parent=FBgn0030941.1.mrna1;Target=FBgn0030941.1 586 702 +
Chr1	stalkie_big_nohaplotig	exon	166323500	166323707	99	+	.	Parent=FBgn0030941.1.mrna1;Target=FBgn0030941.1 703 910 +
Chr1	stalkie_big_nohaplotig	exon	166332118	166332255	100	+	.	Parent=FBgn0030941.1.mrna1;Target=FBgn0030941.1 911 1048 +
Chr1	stalkie_big_nohaplotig	exon	166335552	166335637	100	+	.	Parent=FBgn0030941.1.mrna1;Target=FBgn0030941.1 1049 1134 +
Chr1	stalkie_big_nohaplotig	CDS	166322790	166323266	.	+	0	Parent=FBgn0030941.1.mrna1;Target=FBgn0030941.1 109 585 +
Chr1	stalkie_big_nohaplotig	CDS	166323325	166323441	.	+	0	Parent=FBgn0030941.1.mrna1;Target=FBgn0030941.1 586 702 +
Chr1	stalkie_big_nohaplotig	CDS	166323500	166323707	.	+	0	Parent=FBgn0030941.1.mrna1;Target=FBgn0030941.1 703 910 +
Chr1	stalkie_big_nohaplotig	CDS	166332118	166332255	.	+	2	Parent=FBgn0030941.1.mrna1;Target=FBgn0030941.1 911 1048 +
Chr1	stalkie_big_nohaplotig	CDS	166335552	166335637	.	+	2	Parent=FBgn0030941.1.mrna1;Target=FBgn0030941.1 1049 1134 +
Chr1	gffcl	locus	166334246	166334630	.	-	.	ID=RLOC_00013559;geneIDs=comp145432_c1_seq1.path1;transcripts=comp145432_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166334246	166334630	.	-	.	ID=comp145432_c1_seq1.mrna1;geneID=comp145432_c1_seq1.path1;Name=comp145432_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=379;mismatches=6;indels=0;unknowns=0;Target=comp145432_c1_seq1 385 1 .;CDS_Target=comp145432_c1_seq1 92 3 .;locus=RLOC_00013559
Chr1	stalkie_big_nohaplotig	exon	166334246	166334630	98	-	.	Parent=comp145432_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166334539	166334628	.	-	0	Parent=comp145432_c1_seq1.mrna1
Chr1	gffcl	locus	166344968	166345692	.	-	.	ID=RLOC_00013560;geneIDs=comp151952_c0_seq1.path1;transcripts=comp151952_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166344968	166345692	.	-	.	ID=comp151952_c0_seq1.mrna1;geneID=comp151952_c0_seq1.path1;Name=comp151952_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=720;mismatches=5;indels=0;unknowns=0;Target=comp151952_c0_seq1 725 1 .;CDS_Target=comp151952_c0_seq1 433 359 .;locus=RLOC_00013560
Chr1	stalkie_big_nohaplotig	exon	166344968	166345692	99	-	.	Parent=comp151952_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166345260	166345334	.	-	0	Parent=comp151952_c0_seq1.mrna1
Chr1	gffcl	locus	166397544	166398015	.	-	.	ID=RLOC_00013561;geneIDs=comp114431_c0_seq1.path2;transcripts=comp114431_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	166397544	166398015	.	-	.	ID=comp114431_c0_seq1.mrna2;geneID=comp114431_c0_seq1.path2;Name=comp114431_c0_seq1;Dir=sensecoverage=88.5;identity=98.5;matches=386;mismatches=2;indels=4;unknowns=0;Target=comp114431_c0_seq1 75 278 +;locus=RLOC_00013561
Chr1	stalkie_big_nohaplotig	exon	166397544	166397689	99	-	.	Parent=comp114431_c0_seq1.mrna2;Target=comp114431_c0_seq1 298 443 +
Chr1	stalkie_big_nohaplotig	exon	166397774	166398015	97	-	.	Parent=comp114431_c0_seq1.mrna2;Target=comp114431_c0_seq1 52 297 +
Chr1	stalkie_big_nohaplotig	CDS	166397793	166397992	.	-	0	Parent=comp114431_c0_seq1.mrna2
Chr1	gffcl	locus	166422269	166423812	.	-	.	ID=RLOC_00013562;geneIDs=FBgn0003889.6.path1;transcripts=FBgn0003889.6.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166422269	166423812	.	-	.	ID=FBgn0003889.6.mrna1;geneID=FBgn0003889.6.path1;Name=FBgn0003889.6;Dir=sensecoverage=98.7;identity=99.6;matches=1333;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013562
Chr1	stalkie_big_nohaplotig	exon	166422269	166423172	99	-	.	Parent=FBgn0003889.6.mrna1;Target=FBgn0003889.6 436 1339 +
Chr1	stalkie_big_nohaplotig	exon	166423378	166423812	99	-	.	Parent=FBgn0003889.6.mrna1;Target=FBgn0003889.6 1 435 +
Chr1	stalkie_big_nohaplotig	CDS	166422270	166423172	.	-	0	Parent=FBgn0003889.6.mrna1;Target=FBgn0003889.6 436 1338 +
Chr1	stalkie_big_nohaplotig	CDS	166423378	166423812	.	-	0	Parent=FBgn0003889.6.mrna1;Target=FBgn0003889.6 1 435 +
Chr1	gffcl	locus	166424076	166425857	.	+	.	ID=RLOC_00013563;geneIDs=FBgn0032291.1.path1;transcripts=FBgn0032291.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166424076	166425857	.	+	.	ID=FBgn0032291.1.mrna1;geneID=FBgn0032291.1.path1;Name=FBgn0032291.1;Dir=sensecoverage=100.0;identity=100.0;matches=747;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013563
Chr1	stalkie_big_nohaplotig	exon	166424076	166424252	100	+	.	Parent=FBgn0032291.1.mrna1;Target=FBgn0032291.1 1 177 +
Chr1	stalkie_big_nohaplotig	exon	166425221	166425412	100	+	.	Parent=FBgn0032291.1.mrna1;Target=FBgn0032291.1 178 369 +
Chr1	stalkie_big_nohaplotig	exon	166425480	166425857	100	+	.	Parent=FBgn0032291.1.mrna1;Target=FBgn0032291.1 370 747 +
Chr1	stalkie_big_nohaplotig	CDS	166424076	166424252	.	+	0	Parent=FBgn0032291.1.mrna1;Target=FBgn0032291.1 1 177 +
Chr1	stalkie_big_nohaplotig	CDS	166425221	166425412	.	+	0	Parent=FBgn0032291.1.mrna1;Target=FBgn0032291.1 178 369 +
Chr1	stalkie_big_nohaplotig	CDS	166425480	166425857	.	+	0	Parent=FBgn0032291.1.mrna1;Target=FBgn0032291.1 370 747 +
Chr1	gffcl	locus	166431340	166633417	.	.	.	ID=RLOC_00013564;geneIDs=FBgn0027574.path1,FBgn0000242.1.path1,FBgn0004028.1.path1,FBgn0038274.1.path1,FBgn0052594.1.path1,comp59888_c0_seq1.path1,comp112767_c0_seq1.path1,comp154930_c0_seq1.path1,comp156666_c0_seq1.path1,comp159004_c0_seq1.path1,comp184378_c0_seq1.path1,comp211227_c0_seq1.path1,comp450224_c0_seq1.path1,comp529703_c0_seq1.path1;transcripts=comp156666_c0_seq1.mrna1,FBgn0000242.1.mrna1,comp112767_c0_seq1.mrna1,comp159004_c0_seq1.mrna1,FBgn0027574.mrna1,FBgn0038274.1.mrna1,comp154930_c0_seq1.mrna1,FBgn0052594.1.mrna1,FBgn0004028.1.mrna1,comp450224_c0_seq1.mrna1,comp184378_c0_seq1.mrna1,comp59888_c0_seq1.mrna1,comp211227_c0_seq1.mrna1,comp529703_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166431340	166499209	.	-	.	ID=comp156666_c0_seq1.mrna1;geneID=comp156666_c0_seq1.path1;Name=comp156666_c0_seq1;Dir=antisensecoverage=99.5;identity=99.4;matches=2503;mismatches=8;indels=8;unknowns=0;locus=RLOC_00013564
Chr1	stalkie_big_nohaplotig	exon	166431340	166432536	99	-	.	Parent=comp156666_c0_seq1.mrna1;Target=comp156666_c0_seq1 1 1199 -
Chr1	stalkie_big_nohaplotig	exon	166437456	166437581	98	-	.	Parent=comp156666_c0_seq1.mrna1;Target=comp156666_c0_seq1 1200 1325 -
Chr1	stalkie_big_nohaplotig	exon	166437693	166438003	100	-	.	Parent=comp156666_c0_seq1.mrna1;Target=comp156666_c0_seq1 1326 1636 -
Chr1	stalkie_big_nohaplotig	exon	166498333	166499209	99	-	.	Parent=comp156666_c0_seq1.mrna1;Target=comp156666_c0_seq1 1637 2519 -
Chr1	stalkie_big_nohaplotig	CDS	166432215	166432536	.	-	1	Parent=comp156666_c0_seq1.mrna1;Target=comp156666_c0_seq1 878 1199 .
Chr1	stalkie_big_nohaplotig	CDS	166437456	166437581	.	-	1	Parent=comp156666_c0_seq1.mrna1;Target=comp156666_c0_seq1 1200 1325 .
Chr1	stalkie_big_nohaplotig	CDS	166437693	166438003	.	-	0	Parent=comp156666_c0_seq1.mrna1;Target=comp156666_c0_seq1 1326 1636 .
Chr1	stalkie_big_nohaplotig	mRNA	166432218	166520805	.	-	.	ID=FBgn0000242.1.mrna1;geneID=FBgn0000242.1.path1;Name=FBgn0000242.1;Dir=sensecoverage=100.0;identity=99.8;matches=1060;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013564
Chr1	stalkie_big_nohaplotig	exon	166432218	166432536	100	-	.	Parent=FBgn0000242.1.mrna1;Target=FBgn0000242.1 744 1062 +
Chr1	stalkie_big_nohaplotig	exon	166437456	166437581	98	-	.	Parent=FBgn0000242.1.mrna1;Target=FBgn0000242.1 618 743 +
Chr1	stalkie_big_nohaplotig	exon	166437693	166438003	100	-	.	Parent=FBgn0000242.1.mrna1;Target=FBgn0000242.1 307 617 +
Chr1	stalkie_big_nohaplotig	exon	166520500	166520805	100	-	.	Parent=FBgn0000242.1.mrna1;Target=FBgn0000242.1 1 306 +
Chr1	stalkie_big_nohaplotig	CDS	166432218	166432536	.	-	1	Parent=FBgn0000242.1.mrna1;Target=FBgn0000242.1 744 1062 +
Chr1	stalkie_big_nohaplotig	CDS	166437456	166437581	.	-	1	Parent=FBgn0000242.1.mrna1;Target=FBgn0000242.1 618 743 +
Chr1	stalkie_big_nohaplotig	CDS	166437693	166438003	.	-	0	Parent=FBgn0000242.1.mrna1;Target=FBgn0000242.1 307 617 +
Chr1	stalkie_big_nohaplotig	CDS	166520500	166520805	.	-	0	Parent=FBgn0000242.1.mrna1;Target=FBgn0000242.1 1 306 +
Chr1	stalkie_big_nohaplotig	mRNA	166434322	166572282	.	-	.	ID=comp112767_c0_seq1.mrna1;geneID=comp112767_c0_seq1.path1;Name=comp112767_c0_seq1;Dir=indeterminatecoverage=83.2;identity=99.9;matches=913;mismatches=1;indels=0;unknowns=0;Target=comp112767_c0_seq1 728 603 .;locus=RLOC_00013564
Chr1	stalkie_big_nohaplotig	exon	166434322	166434330	100	-	.	Parent=comp112767_c0_seq1.mrna1;Target=comp112767_c0_seq1 1008 1000 .
Chr1	stalkie_big_nohaplotig	exon	166435415	166435417	100	-	.	Parent=comp112767_c0_seq1.mrna1;Target=comp112767_c0_seq1 999 997 .
Chr1	stalkie_big_nohaplotig	exon	166435796	166435798	100	-	.	Parent=comp112767_c0_seq1.mrna1;Target=comp112767_c0_seq1 996 994 .
Chr1	stalkie_big_nohaplotig	exon	166435896	166435903	100	-	.	Parent=comp112767_c0_seq1.mrna1;Target=comp112767_c0_seq1 993 986 .
Chr1	stalkie_big_nohaplotig	exon	166440890	166440895	100	-	.	Parent=comp112767_c0_seq1.mrna1;Target=comp112767_c0_seq1 985 980 .
Chr1	stalkie_big_nohaplotig	exon	166449076	166449080	100	-	.	Parent=comp112767_c0_seq1.mrna1;Target=comp112767_c0_seq1 979 975 .
Chr1	stalkie_big_nohaplotig	exon	166449465	166449466	100	-	.	Parent=comp112767_c0_seq1.mrna1;Target=comp112767_c0_seq1 974 973 .
Chr1	stalkie_big_nohaplotig	exon	166452229	166452230	100	-	.	Parent=comp112767_c0_seq1.mrna1;Target=comp112767_c0_seq1 972 971 .
Chr1	stalkie_big_nohaplotig	exon	166459016	166459023	100	-	.	Parent=comp112767_c0_seq1.mrna1;Target=comp112767_c0_seq1 970 963 .
Chr1	stalkie_big_nohaplotig	exon	166473477	166473480	100	-	.	Parent=comp112767_c0_seq1.mrna1;Target=comp112767_c0_seq1 962 959 .
Chr1	stalkie_big_nohaplotig	exon	166486628	166486629	100	-	.	Parent=comp112767_c0_seq1.mrna1;Target=comp112767_c0_seq1 958 957 .
Chr1	stalkie_big_nohaplotig	exon	166491280	166491285	100	-	.	Parent=comp112767_c0_seq1.mrna1;Target=comp112767_c0_seq1 956 951 .
Chr1	stalkie_big_nohaplotig	exon	166513732	166513736	100	-	.	Parent=comp112767_c0_seq1.mrna1;Target=comp112767_c0_seq1 950 946 .
Chr1	stalkie_big_nohaplotig	exon	166526587	166526589	100	-	.	Parent=comp112767_c0_seq1.mrna1;Target=comp112767_c0_seq1 945 943 .
Chr1	stalkie_big_nohaplotig	exon	166529896	166529902	100	-	.	Parent=comp112767_c0_seq1.mrna1;Target=comp112767_c0_seq1 942 936 .
Chr1	stalkie_big_nohaplotig	exon	166548845	166548847	100	-	.	Parent=comp112767_c0_seq1.mrna1;Target=comp112767_c0_seq1 935 933 .
Chr1	stalkie_big_nohaplotig	exon	166555657	166555660	100	-	.	Parent=comp112767_c0_seq1.mrna1;Target=comp112767_c0_seq1 932 929 .
Chr1	stalkie_big_nohaplotig	exon	166571449	166572282	99	-	.	Parent=comp112767_c0_seq1.mrna1;Target=comp112767_c0_seq1 928 95 .
Chr1	stalkie_big_nohaplotig	CDS	166571649	166571774	.	-	0	Parent=comp112767_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166445842	166633417	.	-	.	ID=comp159004_c0_seq1.mrna1;geneID=comp159004_c0_seq1.path1;Name=comp159004_c0_seq1;Dir=sensecoverage=66.3;identity=97.0;matches=2242;mismatches=53;indels=16;unknowns=0;locus=RLOC_00013564
Chr1	stalkie_big_nohaplotig	exon	166445842	166445848	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2390 2396 +
Chr1	stalkie_big_nohaplotig	exon	166459837	166459838	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2388 2389 +
Chr1	stalkie_big_nohaplotig	exon	166463465	166463467	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2385 2387 +
Chr1	stalkie_big_nohaplotig	exon	166470524	166470528	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2380 2384 +
Chr1	stalkie_big_nohaplotig	exon	166494403	166494406	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2376 2379 +
Chr1	stalkie_big_nohaplotig	exon	166496107	166496111	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2371 2375 +
Chr1	stalkie_big_nohaplotig	exon	166498947	166498954	75	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2363 2370 +
Chr1	stalkie_big_nohaplotig	exon	166501360	166501368	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2343 2351 +
Chr1	stalkie_big_nohaplotig	exon	166504192	166504198	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2336 2342 +
Chr1	stalkie_big_nohaplotig	exon	166513735	166513745	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2302 2312 +
Chr1	stalkie_big_nohaplotig	exon	166537378	166537408	48	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2265 2301 +
Chr1	stalkie_big_nohaplotig	exon	166539687	166539692	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2259 2264 +
Chr1	stalkie_big_nohaplotig	exon	166540019	166540090	45	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2193 2258 +
Chr1	stalkie_big_nohaplotig	exon	166546792	166546799	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2185 2192 +
Chr1	stalkie_big_nohaplotig	exon	166549789	166549795	71	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2178 2184 +
Chr1	stalkie_big_nohaplotig	exon	166555727	166555728	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2176 2177 +
Chr1	stalkie_big_nohaplotig	exon	166563637	166563645	77	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2167 2175 +
Chr1	stalkie_big_nohaplotig	exon	166575676	166575689	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2093 2106 +
Chr1	stalkie_big_nohaplotig	exon	166576369	166576373	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2088 2092 +
Chr1	stalkie_big_nohaplotig	exon	166591889	166591891	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2085 2087 +
Chr1	stalkie_big_nohaplotig	exon	166595871	166595874	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2081 2084 +
Chr1	stalkie_big_nohaplotig	exon	166598495	166598501	85	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2074 2080 +
Chr1	stalkie_big_nohaplotig	exon	166602691	166602693	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2071 2073 +
Chr1	stalkie_big_nohaplotig	exon	166618206	166618360	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 1916 2070 +
Chr1	stalkie_big_nohaplotig	exon	166619505	166619544	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 1876 1915 +
Chr1	stalkie_big_nohaplotig	exon	166619897	166620038	99	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 1734 1875 +
Chr1	stalkie_big_nohaplotig	exon	166620108	166620151	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 1690 1733 +
Chr1	stalkie_big_nohaplotig	exon	166623814	166623914	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 1589 1689 +
Chr1	stalkie_big_nohaplotig	exon	166628175	166628298	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 1465 1588 +
Chr1	stalkie_big_nohaplotig	exon	166628362	166628490	99	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 1335 1464 +
Chr1	stalkie_big_nohaplotig	exon	166628744	166628923	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 1155 1334 +
Chr1	stalkie_big_nohaplotig	exon	166629305	166629343	97	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 1115 1154 +
Chr1	stalkie_big_nohaplotig	exon	166632305	166633417	100	-	.	Parent=comp159004_c0_seq1.mrna1;Target=comp159004_c0_seq1 2 1114 +
Chr1	stalkie_big_nohaplotig	mRNA	166529367	166530380	.	-	.	ID=FBgn0027574.mrna1;geneID=FBgn0027574.path1;Name=FBgn0027574;Dir=sensecoverage=100.0;identity=99.5;matches=821;mismatches=3;indels=1;unknowns=0;locus=RLOC_00013564
Chr1	stalkie_big_nohaplotig	exon	166529367	166530079	99	-	.	Parent=FBgn0027574.mrna1;Target=FBgn0027574 112 825 +
Chr1	stalkie_big_nohaplotig	exon	166530270	166530380	100	-	.	Parent=FBgn0027574.mrna1;Target=FBgn0027574 1 111 +
Chr1	stalkie_big_nohaplotig	CDS	166529367	166530079	.	-	0	Parent=FBgn0027574.mrna1;Target=FBgn0027574 112 825 +
Chr1	stalkie_big_nohaplotig	CDS	166530270	166530380	.	-	0	Parent=FBgn0027574.mrna1;Target=FBgn0027574 1 111 +
Chr1	stalkie_big_nohaplotig	mRNA	166535878	166539390	.	-	.	ID=FBgn0038274.1.mrna1;geneID=FBgn0038274.1.path1;Name=FBgn0038274.1;Dir=sensecoverage=100.0;identity=99.8;matches=2445;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013564
Chr1	stalkie_big_nohaplotig	exon	166535878	166535994	100	-	.	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 2335 2451 +
Chr1	stalkie_big_nohaplotig	exon	166536068	166536372	100	-	.	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 2030 2334 +
Chr1	stalkie_big_nohaplotig	exon	166536426	166536552	100	-	.	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 1903 2029 +
Chr1	stalkie_big_nohaplotig	exon	166536972	166537095	100	-	.	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 1779 1902 +
Chr1	stalkie_big_nohaplotig	exon	166537157	166537403	99	-	.	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 1532 1778 +
Chr1	stalkie_big_nohaplotig	exon	166537492	166537855	99	-	.	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 1168 1531 +
Chr1	stalkie_big_nohaplotig	exon	166537913	166538054	99	-	.	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 1026 1167 +
Chr1	stalkie_big_nohaplotig	exon	166538119	166538352	99	-	.	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 792 1025 +
Chr1	stalkie_big_nohaplotig	exon	166538410	166538657	100	-	.	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 544 791 +
Chr1	stalkie_big_nohaplotig	exon	166538724	166538903	98	-	.	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 364 543 +
Chr1	stalkie_big_nohaplotig	exon	166538968	166539148	100	-	.	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 183 363 +
Chr1	stalkie_big_nohaplotig	exon	166539209	166539390	100	-	.	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 1 182 +
Chr1	stalkie_big_nohaplotig	CDS	166535878	166535994	.	-	0	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 2335 2451 +
Chr1	stalkie_big_nohaplotig	CDS	166536068	166536372	.	-	2	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 2030 2334 +
Chr1	stalkie_big_nohaplotig	CDS	166536426	166536552	.	-	0	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 1903 2029 +
Chr1	stalkie_big_nohaplotig	CDS	166536972	166537095	.	-	1	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 1779 1902 +
Chr1	stalkie_big_nohaplotig	CDS	166537157	166537403	.	-	2	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 1532 1778 +
Chr1	stalkie_big_nohaplotig	CDS	166537492	166537855	.	-	0	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 1168 1531 +
Chr1	stalkie_big_nohaplotig	CDS	166537913	166538054	.	-	1	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 1026 1167 +
Chr1	stalkie_big_nohaplotig	CDS	166538119	166538352	.	-	1	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 792 1025 +
Chr1	stalkie_big_nohaplotig	CDS	166538410	166538657	.	-	0	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 544 791 +
Chr1	stalkie_big_nohaplotig	CDS	166538724	166538903	.	-	0	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 364 543 +
Chr1	stalkie_big_nohaplotig	CDS	166538968	166539148	.	-	1	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 183 363 +
Chr1	stalkie_big_nohaplotig	CDS	166539209	166539390	.	-	0	Parent=FBgn0038274.1.mrna1;Target=FBgn0038274.1 1 182 +
Chr1	stalkie_big_nohaplotig	mRNA	166562215	166564058	.	+	.	ID=comp154930_c0_seq1.mrna1;geneID=comp154930_c0_seq1.path1;Name=comp154930_c0_seq1;Dir=indeterminatecoverage=97.7;identity=99.7;matches=1839;mismatches=5;indels=0;unknowns=0;Target=comp154930_c0_seq1 1844 1 .;CDS_Target=comp154930_c0_seq1 1830 1687 .;locus=RLOC_00013564
Chr1	stalkie_big_nohaplotig	exon	166562215	166564058	99	+	.	Parent=comp154930_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166563901	166564044	.	+	0	Parent=comp154930_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166575626	166595704	.	-	.	ID=FBgn0052594.1.mrna1;geneID=FBgn0052594.1.path1;Name=FBgn0052594.1;Dir=sensecoverage=100.0;identity=99.9;matches=1427;mismatches=0;indels=1;unknowns=0;locus=RLOC_00013564
Chr1	stalkie_big_nohaplotig	exon	166575626	166576081	99	-	.	Parent=FBgn0052594.1.mrna1;Target=FBgn0052594.1 972 1428 +
Chr1	stalkie_big_nohaplotig	exon	166576162	166576265	100	-	.	Parent=FBgn0052594.1.mrna1;Target=FBgn0052594.1 868 971 +
Chr1	stalkie_big_nohaplotig	exon	166576348	166576533	100	-	.	Parent=FBgn0052594.1.mrna1;Target=FBgn0052594.1 682 867 +
Chr1	stalkie_big_nohaplotig	exon	166576686	166576831	100	-	.	Parent=FBgn0052594.1.mrna1;Target=FBgn0052594.1 536 681 +
Chr1	stalkie_big_nohaplotig	exon	166576896	166577157	100	-	.	Parent=FBgn0052594.1.mrna1;Target=FBgn0052594.1 274 535 +
Chr1	stalkie_big_nohaplotig	exon	166595432	166595704	100	-	.	Parent=FBgn0052594.1.mrna1;Target=FBgn0052594.1 1 273 +
Chr1	stalkie_big_nohaplotig	CDS	166575626	166576081	.	-	1	Parent=FBgn0052594.1.mrna1;Target=FBgn0052594.1 972 1428 +
Chr1	stalkie_big_nohaplotig	CDS	166576162	166576265	.	-	0	Parent=FBgn0052594.1.mrna1;Target=FBgn0052594.1 868 971 +
Chr1	stalkie_big_nohaplotig	CDS	166576348	166576533	.	-	0	Parent=FBgn0052594.1.mrna1;Target=FBgn0052594.1 682 867 +
Chr1	stalkie_big_nohaplotig	CDS	166576686	166576831	.	-	2	Parent=FBgn0052594.1.mrna1;Target=FBgn0052594.1 536 681 +
Chr1	stalkie_big_nohaplotig	CDS	166576896	166577157	.	-	0	Parent=FBgn0052594.1.mrna1;Target=FBgn0052594.1 274 535 +
Chr1	stalkie_big_nohaplotig	CDS	166595432	166595704	.	-	0	Parent=FBgn0052594.1.mrna1;Target=FBgn0052594.1 1 273 +
Chr1	stalkie_big_nohaplotig	mRNA	166618292	166628874	.	-	.	ID=FBgn0004028.1.mrna1;geneID=FBgn0004028.1.path1;Name=FBgn0004028.1;Dir=sensecoverage=100.0;identity=99.7;matches=739;mismatches=1;indels=1;unknowns=0;locus=RLOC_00013564
Chr1	stalkie_big_nohaplotig	exon	166618292	166618360	100	-	.	Parent=FBgn0004028.1.mrna1;Target=FBgn0004028.1 673 741 +
Chr1	stalkie_big_nohaplotig	exon	166619897	166620038	99	-	.	Parent=FBgn0004028.1.mrna1;Target=FBgn0004028.1 531 672 +
Chr1	stalkie_big_nohaplotig	exon	166620108	166620151	100	-	.	Parent=FBgn0004028.1.mrna1;Target=FBgn0004028.1 487 530 +
Chr1	stalkie_big_nohaplotig	exon	166623814	166623914	100	-	.	Parent=FBgn0004028.1.mrna1;Target=FBgn0004028.1 386 486 +
Chr1	stalkie_big_nohaplotig	exon	166628175	166628298	100	-	.	Parent=FBgn0004028.1.mrna1;Target=FBgn0004028.1 262 385 +
Chr1	stalkie_big_nohaplotig	exon	166628362	166628490	99	-	.	Parent=FBgn0004028.1.mrna1;Target=FBgn0004028.1 132 261 +
Chr1	stalkie_big_nohaplotig	exon	166628744	166628874	100	-	.	Parent=FBgn0004028.1.mrna1;Target=FBgn0004028.1 1 131 +
Chr1	stalkie_big_nohaplotig	CDS	166628363	166628490	.	-	0	Parent=FBgn0004028.1.mrna1;Target=FBgn0004028.1 132 260 +
Chr1	stalkie_big_nohaplotig	CDS	166628744	166628872	.	-	0	Parent=FBgn0004028.1.mrna1;Target=FBgn0004028.1 3 131 +
Chr1	stalkie_big_nohaplotig	mRNA	166618340	166619546	.	-	.	ID=comp450224_c0_seq1.mrna1;geneID=comp450224_c0_seq1.path1;Name=comp450224_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.9;matches=1206;mismatches=1;indels=0;unknowns=0;Target=comp450224_c0_seq1 1213 7 .;CDS_Target=comp450224_c0_seq1 218 84 .;locus=RLOC_00013564
Chr1	stalkie_big_nohaplotig	exon	166618340	166619546	99	-	.	Parent=comp450224_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166619335	166619469	.	-	0	Parent=comp450224_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166620131	166620595	.	-	.	ID=comp184378_c0_seq1.mrna1;geneID=comp184378_c0_seq1.path1;Name=comp184378_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=464;mismatches=1;indels=0;unknowns=0;Target=comp184378_c0_seq1 465 1 .;CDS_Target=comp184378_c0_seq1 36 1 .;locus=RLOC_00013564
Chr1	stalkie_big_nohaplotig	exon	166620131	166620595	99	-	.	Parent=comp184378_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166620560	166620595	.	-	0	Parent=comp184378_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166620648	166623837	.	-	.	ID=comp59888_c0_seq1.mrna1;geneID=comp59888_c0_seq1.path1;Name=comp59888_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=3190;mismatches=0;indels=1;unknowns=0;Target=comp59888_c0_seq1 3191 1 .;CDS_Target=comp59888_c0_seq1 2086 1955 .;locus=RLOC_00013564
Chr1	stalkie_big_nohaplotig	exon	166620648	166623837	99	-	.	Parent=comp59888_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166621752	166621883	.	-	0	Parent=comp59888_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166627985	166628197	.	-	.	ID=comp211227_c0_seq1.mrna1;geneID=comp211227_c0_seq1.path1;Name=comp211227_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=213;mismatches=0;indels=0;unknowns=0;Target=comp211227_c0_seq1 213 1 .;CDS_Target=comp211227_c0_seq1 193 2 .;locus=RLOC_00013564
Chr1	stalkie_big_nohaplotig	exon	166627985	166628197	100	-	.	Parent=comp211227_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166628005	166628196	.	-	0	Parent=comp211227_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166628470	166628766	.	-	.	ID=comp529703_c0_seq1.mrna1;geneID=comp529703_c0_seq1.path1;Name=comp529703_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=297;mismatches=0;indels=0;unknowns=0;Target=comp529703_c0_seq1 297 1 .;CDS_Target=comp529703_c0_seq1 245 147 .;locus=RLOC_00013564
Chr1	stalkie_big_nohaplotig	exon	166628470	166628766	100	-	.	Parent=comp529703_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166628522	166628620	.	-	0	Parent=comp529703_c0_seq1.mrna1
Chr1	gffcl	locus	166432552	166433575	.	-	.	ID=RLOC_00013565;geneIDs=comp142448_c0_seq1.path1;transcripts=comp142448_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166432552	166433575	.	-	.	ID=comp142448_c0_seq1.mrna1;geneID=comp142448_c0_seq1.path1;Name=comp142448_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.9;matches=1023;mismatches=1;indels=0;unknowns=0;Target=comp142448_c0_seq1 1024 1 .;CDS_Target=comp142448_c0_seq1 357 229 .;locus=RLOC_00013565
Chr1	stalkie_big_nohaplotig	exon	166432552	166433575	99	-	.	Parent=comp142448_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166433219	166433347	.	-	0	Parent=comp142448_c0_seq1.mrna1
Chr1	gffcl	locus	166452997	166454162	.	+	.	ID=RLOC_00013566;geneIDs=comp153929_c0_seq1.path1;transcripts=comp153929_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166452997	166454162	.	+	.	ID=comp153929_c0_seq1.mrna1;geneID=comp153929_c0_seq1.path1;Name=comp153929_c0_seq1;Dir=indeterminatecoverage=95.1;identity=99.7;matches=1162;mismatches=4;indels=0;unknowns=0;Target=comp153929_c0_seq1 1166 1 .;CDS_Target=comp153929_c0_seq1 516 400 .;locus=RLOC_00013566
Chr1	stalkie_big_nohaplotig	exon	166452997	166454162	99	+	.	Parent=comp153929_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166453396	166453512	.	+	0	Parent=comp153929_c0_seq1.mrna1
Chr1	gffcl	locus	166466940	166467911	.	-	.	ID=RLOC_00013567;geneIDs=comp140898_c0_seq1.path1;transcripts=comp140898_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166466940	166467911	.	-	.	ID=comp140898_c0_seq1.mrna1;geneID=comp140898_c0_seq1.path1;Name=comp140898_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=967;mismatches=5;indels=0;unknowns=0;Target=comp140898_c0_seq1 972 1 .;CDS_Target=comp140898_c0_seq1 256 77 .;locus=RLOC_00013567
Chr1	stalkie_big_nohaplotig	exon	166466940	166467911	99	-	.	Parent=comp140898_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166467656	166467835	.	-	0	Parent=comp140898_c0_seq1.mrna1
Chr1	gffcl	locus	166510564	166511352	.	-	.	ID=RLOC_00013568;geneIDs=FBgn0026777.1.path1;transcripts=FBgn0026777.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166510564	166511352	.	-	.	ID=FBgn0026777.1.mrna1;geneID=FBgn0026777.1.path1;Name=FBgn0026777.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=788;mismatches=1;indels=0;unknowns=0;Target=FBgn0026777.1 789 1 .;locus=RLOC_00013568
Chr1	stalkie_big_nohaplotig	exon	166510564	166511352	99	-	.	Parent=FBgn0026777.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166510564	166511352	.	-	0	Parent=FBgn0026777.1.mrna1
Chr1	gffcl	locus	166521142	166526109	.	-	.	ID=RLOC_00013569;geneIDs=FBgn0027087.1.path1;transcripts=FBgn0027087.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166521142	166526109	.	-	.	ID=FBgn0027087.1.mrna1;geneID=FBgn0027087.1.path1;Name=FBgn0027087.1;Dir=sensecoverage=100.0;identity=99.7;matches=1553;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013569
Chr1	stalkie_big_nohaplotig	exon	166521142	166521936	99	-	.	Parent=FBgn0027087.1.mrna1;Target=FBgn0027087.1 763 1557 +
Chr1	stalkie_big_nohaplotig	exon	166521988	166522194	100	-	.	Parent=FBgn0027087.1.mrna1;Target=FBgn0027087.1 556 762 +
Chr1	stalkie_big_nohaplotig	exon	166522253	166522474	100	-	.	Parent=FBgn0027087.1.mrna1;Target=FBgn0027087.1 334 555 +
Chr1	stalkie_big_nohaplotig	exon	166522535	166522747	99	-	.	Parent=FBgn0027087.1.mrna1;Target=FBgn0027087.1 121 333 +
Chr1	stalkie_big_nohaplotig	exon	166525990	166526109	100	-	.	Parent=FBgn0027087.1.mrna1;Target=FBgn0027087.1 1 120 +
Chr1	stalkie_big_nohaplotig	CDS	166521142	166521936	.	-	0	Parent=FBgn0027087.1.mrna1;Target=FBgn0027087.1 763 1557 +
Chr1	stalkie_big_nohaplotig	CDS	166521988	166522194	.	-	0	Parent=FBgn0027087.1.mrna1;Target=FBgn0027087.1 556 762 +
Chr1	stalkie_big_nohaplotig	CDS	166522253	166522474	.	-	0	Parent=FBgn0027087.1.mrna1;Target=FBgn0027087.1 334 555 +
Chr1	stalkie_big_nohaplotig	CDS	166522535	166522747	.	-	0	Parent=FBgn0027087.1.mrna1;Target=FBgn0027087.1 121 333 +
Chr1	stalkie_big_nohaplotig	CDS	166525990	166526109	.	-	0	Parent=FBgn0027087.1.mrna1;Target=FBgn0027087.1 1 120 +
Chr1	gffcl	locus	166532400	166535075	.	+	.	ID=RLOC_00013570;geneIDs=FBgn0030530.1.path1;transcripts=FBgn0030530.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166532400	166535075	.	+	.	ID=FBgn0030530.1.mrna1;geneID=FBgn0030530.1.path1;Name=FBgn0030530.1;Dir=sensecoverage=100.0;identity=99.6;matches=2080;mismatches=8;indels=0;unknowns=0;locus=RLOC_00013570
Chr1	stalkie_big_nohaplotig	exon	166532400	166532961	100	+	.	Parent=FBgn0030530.1.mrna1;Target=FBgn0030530.1 1 562 +
Chr1	stalkie_big_nohaplotig	exon	166533024	166533385	100	+	.	Parent=FBgn0030530.1.mrna1;Target=FBgn0030530.1 563 924 +
Chr1	stalkie_big_nohaplotig	exon	166533443	166533824	99	+	.	Parent=FBgn0030530.1.mrna1;Target=FBgn0030530.1 925 1306 +
Chr1	stalkie_big_nohaplotig	exon	166534060	166534197	99	+	.	Parent=FBgn0030530.1.mrna1;Target=FBgn0030530.1 1307 1444 +
Chr1	stalkie_big_nohaplotig	exon	166534251	166534420	100	+	.	Parent=FBgn0030530.1.mrna1;Target=FBgn0030530.1 1445 1614 +
Chr1	stalkie_big_nohaplotig	exon	166534481	166534543	100	+	.	Parent=FBgn0030530.1.mrna1;Target=FBgn0030530.1 1615 1677 +
Chr1	stalkie_big_nohaplotig	exon	166534595	166534760	100	+	.	Parent=FBgn0030530.1.mrna1;Target=FBgn0030530.1 1678 1843 +
Chr1	stalkie_big_nohaplotig	exon	166534831	166535075	98	+	.	Parent=FBgn0030530.1.mrna1;Target=FBgn0030530.1 1844 2088 +
Chr1	stalkie_big_nohaplotig	CDS	166532400	166532961	.	+	0	Parent=FBgn0030530.1.mrna1;Target=FBgn0030530.1 1 562 +
Chr1	stalkie_big_nohaplotig	CDS	166533024	166533385	.	+	2	Parent=FBgn0030530.1.mrna1;Target=FBgn0030530.1 563 924 +
Chr1	stalkie_big_nohaplotig	CDS	166533443	166533824	.	+	0	Parent=FBgn0030530.1.mrna1;Target=FBgn0030530.1 925 1306 +
Chr1	stalkie_big_nohaplotig	CDS	166534060	166534197	.	+	2	Parent=FBgn0030530.1.mrna1;Target=FBgn0030530.1 1307 1444 +
Chr1	stalkie_big_nohaplotig	CDS	166534251	166534420	.	+	2	Parent=FBgn0030530.1.mrna1;Target=FBgn0030530.1 1445 1614 +
Chr1	stalkie_big_nohaplotig	CDS	166534481	166534543	.	+	0	Parent=FBgn0030530.1.mrna1;Target=FBgn0030530.1 1615 1677 +
Chr1	stalkie_big_nohaplotig	CDS	166534595	166534760	.	+	0	Parent=FBgn0030530.1.mrna1;Target=FBgn0030530.1 1678 1843 +
Chr1	stalkie_big_nohaplotig	CDS	166534831	166535075	.	+	2	Parent=FBgn0030530.1.mrna1;Target=FBgn0030530.1 1844 2088 +
Chr1	gffcl	locus	166540374	166544817	.	+	.	ID=RLOC_00013571;geneIDs=FBgn0002774.1.path1;transcripts=FBgn0002774.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166540374	166544817	.	+	.	ID=FBgn0002774.1.mrna1;geneID=FBgn0002774.1.path1;Name=FBgn0002774.1;Dir=sensecoverage=100.0;identity=99.9;matches=3724;mismatches=5;indels=0;unknowns=0;locus=RLOC_00013571
Chr1	stalkie_big_nohaplotig	exon	166540374	166540500	100	+	.	Parent=FBgn0002774.1.mrna1;Target=FBgn0002774.1 1 127 +
Chr1	stalkie_big_nohaplotig	exon	166540561	166541050	100	+	.	Parent=FBgn0002774.1.mrna1;Target=FBgn0002774.1 128 617 +
Chr1	stalkie_big_nohaplotig	exon	166541589	166541910	100	+	.	Parent=FBgn0002774.1.mrna1;Target=FBgn0002774.1 618 939 +
Chr1	stalkie_big_nohaplotig	exon	166541975	166543189	99	+	.	Parent=FBgn0002774.1.mrna1;Target=FBgn0002774.1 940 2154 +
Chr1	stalkie_big_nohaplotig	exon	166543243	166544817	99	+	.	Parent=FBgn0002774.1.mrna1;Target=FBgn0002774.1 2155 3729 +
Chr1	stalkie_big_nohaplotig	CDS	166540374	166540500	.	+	0	Parent=FBgn0002774.1.mrna1;Target=FBgn0002774.1 1 127 +
Chr1	stalkie_big_nohaplotig	CDS	166540561	166541050	.	+	2	Parent=FBgn0002774.1.mrna1;Target=FBgn0002774.1 128 617 +
Chr1	stalkie_big_nohaplotig	CDS	166541589	166541910	.	+	1	Parent=FBgn0002774.1.mrna1;Target=FBgn0002774.1 618 939 +
Chr1	stalkie_big_nohaplotig	CDS	166541975	166543189	.	+	0	Parent=FBgn0002774.1.mrna1;Target=FBgn0002774.1 940 2154 +
Chr1	stalkie_big_nohaplotig	CDS	166543243	166544817	.	+	0	Parent=FBgn0002774.1.mrna1;Target=FBgn0002774.1 2155 3729 +
Chr1	gffcl	locus	166545726	166616391	.	+	.	ID=RLOC_00013572;geneIDs=FBgn0030600.1.path1;transcripts=FBgn0030600.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166545726	166616391	.	+	.	ID=FBgn0030600.1.mrna1;geneID=FBgn0030600.1.path1;Name=FBgn0030600.1;Dir=sensecoverage=100.0;identity=99.9;matches=15608;mismatches=10;indels=0;unknowns=12;locus=RLOC_00013572
Chr1	stalkie_big_nohaplotig	exon	166545726	166545799	100	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 1 74 +
Chr1	stalkie_big_nohaplotig	exon	166547347	166548310	99	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 75 1038 +
Chr1	stalkie_big_nohaplotig	exon	166548371	166548754	99	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 1039 1422 +
Chr1	stalkie_big_nohaplotig	exon	166548852	166549293	99	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 1423 1864 +
Chr1	stalkie_big_nohaplotig	exon	166549357	166549927	99	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 1865 2435 +
Chr1	stalkie_big_nohaplotig	exon	166549981	166550066	100	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 2436 2521 +
Chr1	stalkie_big_nohaplotig	exon	166550128	166550719	100	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 2522 3113 +
Chr1	stalkie_big_nohaplotig	exon	166550783	166550922	100	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 3114 3253 +
Chr1	stalkie_big_nohaplotig	exon	166550989	166551476	100	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 3254 3741 +
Chr1	stalkie_big_nohaplotig	exon	166551527	166551663	100	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 3742 3878 +
Chr1	stalkie_big_nohaplotig	exon	166551725	166552623	99	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 3879 4777 +
Chr1	stalkie_big_nohaplotig	exon	166552695	166552919	100	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 4778 5002 +
Chr1	stalkie_big_nohaplotig	exon	166552988	166553115	100	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 5003 5130 +
Chr1	stalkie_big_nohaplotig	exon	166553174	166553626	100	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 5131 5583 +
Chr1	stalkie_big_nohaplotig	exon	166553689	166554021	99	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 5584 5916 +
Chr1	stalkie_big_nohaplotig	exon	166554073	166554963	99	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 5917 6807 +
Chr1	stalkie_big_nohaplotig	exon	166555022	166555623	100	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 6808 7409 +
Chr1	stalkie_big_nohaplotig	exon	166555738	166555885	100	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 7410 7557 +
Chr1	stalkie_big_nohaplotig	exon	166555950	166556052	100	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 7558 7660 +
Chr1	stalkie_big_nohaplotig	exon	166556112	166556247	100	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 7661 7796 +
Chr1	stalkie_big_nohaplotig	exon	166607448	166607561	100	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 7797 7910 +
Chr1	stalkie_big_nohaplotig	exon	166607623	166607731	100	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 7911 8019 +
Chr1	stalkie_big_nohaplotig	exon	166607792	166610588	99	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 8020 10816 +
Chr1	stalkie_big_nohaplotig	exon	166610646	166610963	100	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 10817 11134 +
Chr1	stalkie_big_nohaplotig	exon	166611428	166611594	100	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 11135 11301 +
Chr1	stalkie_big_nohaplotig	exon	166611649	166613058	99	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 11302 12711 +
Chr1	stalkie_big_nohaplotig	exon	166613123	166613498	100	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 12712 13087 +
Chr1	stalkie_big_nohaplotig	exon	166613571	166614631	100	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 13088 14148 +
Chr1	stalkie_big_nohaplotig	exon	166614715	166615056	100	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 14149 14490 +
Chr1	stalkie_big_nohaplotig	exon	166615119	166615583	100	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 14491 14955 +
Chr1	stalkie_big_nohaplotig	exon	166615656	166615849	99	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 14956 15149 +
Chr1	stalkie_big_nohaplotig	exon	166615911	166616391	100	+	.	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 15150 15630 +
Chr1	stalkie_big_nohaplotig	CDS	166545726	166545799	.	+	0	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 1 74 +
Chr1	stalkie_big_nohaplotig	CDS	166547347	166548310	.	+	1	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 75 1038 +
Chr1	stalkie_big_nohaplotig	CDS	166548371	166548754	.	+	0	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 1039 1422 +
Chr1	stalkie_big_nohaplotig	CDS	166548852	166549293	.	+	0	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 1423 1864 +
Chr1	stalkie_big_nohaplotig	CDS	166549357	166549927	.	+	2	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 1865 2435 +
Chr1	stalkie_big_nohaplotig	CDS	166549981	166550066	.	+	1	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 2436 2521 +
Chr1	stalkie_big_nohaplotig	CDS	166550128	166550719	.	+	2	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 2522 3113 +
Chr1	stalkie_big_nohaplotig	CDS	166550783	166550922	.	+	1	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 3114 3253 +
Chr1	stalkie_big_nohaplotig	CDS	166550989	166551476	.	+	2	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 3254 3741 +
Chr1	stalkie_big_nohaplotig	CDS	166551527	166551663	.	+	0	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 3742 3878 +
Chr1	stalkie_big_nohaplotig	CDS	166551725	166552623	.	+	1	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 3879 4777 +
Chr1	stalkie_big_nohaplotig	CDS	166552695	166552919	.	+	2	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 4778 5002 +
Chr1	stalkie_big_nohaplotig	CDS	166552988	166553115	.	+	2	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 5003 5130 +
Chr1	stalkie_big_nohaplotig	CDS	166553174	166553626	.	+	0	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 5131 5583 +
Chr1	stalkie_big_nohaplotig	CDS	166553689	166554021	.	+	0	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 5584 5916 +
Chr1	stalkie_big_nohaplotig	CDS	166554073	166554963	.	+	0	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 5917 6807 +
Chr1	stalkie_big_nohaplotig	CDS	166555022	166555623	.	+	0	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 6808 7409 +
Chr1	stalkie_big_nohaplotig	CDS	166555738	166555885	.	+	1	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 7410 7557 +
Chr1	stalkie_big_nohaplotig	CDS	166555950	166556052	.	+	0	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 7558 7660 +
Chr1	stalkie_big_nohaplotig	CDS	166556112	166556247	.	+	2	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 7661 7796 +
Chr1	stalkie_big_nohaplotig	CDS	166607448	166607561	.	+	1	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 7797 7910 +
Chr1	stalkie_big_nohaplotig	CDS	166607623	166607731	.	+	1	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 7911 8019 +
Chr1	stalkie_big_nohaplotig	CDS	166607792	166610588	.	+	0	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 8020 10816 +
Chr1	stalkie_big_nohaplotig	CDS	166610646	166610963	.	+	2	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 10817 11134 +
Chr1	stalkie_big_nohaplotig	CDS	166611428	166611594	.	+	2	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 11135 11301 +
Chr1	stalkie_big_nohaplotig	CDS	166611649	166613058	.	+	0	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 11302 12711 +
Chr1	stalkie_big_nohaplotig	CDS	166613123	166613498	.	+	0	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 12712 13087 +
Chr1	stalkie_big_nohaplotig	CDS	166613571	166614631	.	+	2	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 13088 14148 +
Chr1	stalkie_big_nohaplotig	CDS	166614715	166615056	.	+	0	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 14149 14490 +
Chr1	stalkie_big_nohaplotig	CDS	166615119	166615583	.	+	0	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 14491 14955 +
Chr1	stalkie_big_nohaplotig	CDS	166615656	166615849	.	+	0	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 14956 15149 +
Chr1	stalkie_big_nohaplotig	CDS	166615911	166616391	.	+	1	Parent=FBgn0030600.1.mrna1;Target=FBgn0030600.1 15150 15630 +
Chr1	gffcl	locus	166587537	166588374	.	+	.	ID=RLOC_00013574;geneIDs=comp149978_c1_seq1.path1;transcripts=comp149978_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166587537	166588374	.	+	.	ID=comp149978_c1_seq1.mrna1;geneID=comp149978_c1_seq1.path1;Name=comp149978_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=831;mismatches=7;indels=0;unknowns=0;Target=comp149978_c1_seq1 838 1 .;CDS_Target=comp149978_c1_seq1 37 2 .;locus=RLOC_00013574
Chr1	stalkie_big_nohaplotig	exon	166587537	166588374	99	+	.	Parent=comp149978_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166587538	166587573	.	+	0	Parent=comp149978_c1_seq1.mrna1
Chr1	gffcl	locus	166623894	168579117	.	+	.	ID=RLOC_00013575;geneIDs=comp48099_c0_seq1.path1;transcripts=comp48099_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166623894	168579117	.	+	.	ID=comp48099_c0_seq1.mrna1;geneID=comp48099_c0_seq1.path1;Name=comp48099_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=390;mismatches=1;indels=0;unknowns=8;locus=RLOC_00013575
Chr1	stalkie_big_nohaplotig	exon	166623894	166624214	100	+	.	Parent=comp48099_c0_seq1.mrna1;Target=comp48099_c0_seq1 321 1 .
Chr1	stalkie_big_nohaplotig	exon	168527197	168527200	100	+	.	Parent=comp48099_c0_seq1.mrna1;Target=comp48099_c0_seq1 325 322 .
Chr1	stalkie_big_nohaplotig	exon	168531677	168531679	100	+	.	Parent=comp48099_c0_seq1.mrna1;Target=comp48099_c0_seq1 328 326 .
Chr1	stalkie_big_nohaplotig	exon	168534795	168534802	100	+	.	Parent=comp48099_c0_seq1.mrna1;Target=comp48099_c0_seq1 336 329 .
Chr1	stalkie_big_nohaplotig	exon	168539075	168539076	100	+	.	Parent=comp48099_c0_seq1.mrna1;Target=comp48099_c0_seq1 338 337 .
Chr1	stalkie_big_nohaplotig	exon	168551329	168551330	100	+	.	Parent=comp48099_c0_seq1.mrna1;Target=comp48099_c0_seq1 340 339 .
Chr1	stalkie_big_nohaplotig	exon	168554885	168554893	100	+	.	Parent=comp48099_c0_seq1.mrna1;Target=comp48099_c0_seq1 349 341 .
Chr1	stalkie_big_nohaplotig	exon	168557429	168557439	100	+	.	Parent=comp48099_c0_seq1.mrna1;Target=comp48099_c0_seq1 360 350 .
Chr1	stalkie_big_nohaplotig	exon	168563409	168563423	100	+	.	Parent=comp48099_c0_seq1.mrna1;Target=comp48099_c0_seq1 375 361 .
Chr1	stalkie_big_nohaplotig	exon	168574031	168574033	66	+	.	Parent=comp48099_c0_seq1.mrna1;Target=comp48099_c0_seq1 378 376 .
Chr1	stalkie_big_nohaplotig	exon	168578940	168578943	100	+	.	Parent=comp48099_c0_seq1.mrna1;Target=comp48099_c0_seq1 382 379 .
Chr1	stalkie_big_nohaplotig	exon	168579101	168579117	100	+	.	Parent=comp48099_c0_seq1.mrna1;Target=comp48099_c0_seq1 399 383 .
Chr1	stalkie_big_nohaplotig	CDS	166624084	166624214	.	+	0	Parent=comp48099_c0_seq1.mrna1;Target=comp48099_c0_seq1 321 191 .
Chr1	stalkie_big_nohaplotig	CDS	168527197	168527200	.	+	1	Parent=comp48099_c0_seq1.mrna1;Target=comp48099_c0_seq1 325 322 .
Chr1	gffcl	locus	166624549	166625419	.	+	.	ID=RLOC_00013576;geneIDs=comp64309_c0_seq1.path1;transcripts=comp64309_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166624549	166625419	.	+	.	ID=comp64309_c0_seq1.mrna1;geneID=comp64309_c0_seq1.path1;Name=comp64309_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=870;mismatches=1;indels=0;unknowns=0;Target=comp64309_c0_seq1 871 1 .;CDS_Target=comp64309_c0_seq1 73 2 .;locus=RLOC_00013576
Chr1	stalkie_big_nohaplotig	exon	166624549	166625419	99	+	.	Parent=comp64309_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166624550	166624621	.	+	0	Parent=comp64309_c0_seq1.mrna1
Chr1	gffcl	locus	166625483	166626102	.	-	.	ID=RLOC_00013577;geneIDs=comp213705_c0_seq1.path1;transcripts=comp213705_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166625483	166626102	.	-	.	ID=comp213705_c0_seq1.mrna1;geneID=comp213705_c0_seq1.path1;Name=comp213705_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=620;mismatches=0;indels=0;unknowns=0;Target=comp213705_c0_seq1 620 1 .;CDS_Target=comp213705_c0_seq1 120 1 .;locus=RLOC_00013577
Chr1	stalkie_big_nohaplotig	exon	166625483	166626102	100	-	.	Parent=comp213705_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166625983	166626102	.	-	0	Parent=comp213705_c0_seq1.mrna1
Chr1	gffcl	locus	166654587	166654995	.	+	.	ID=RLOC_00013578;geneIDs=comp112835_c0_seq1.path1;transcripts=comp112835_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166654587	166654995	.	+	.	ID=comp112835_c0_seq1.mrna1;geneID=comp112835_c0_seq1.path1;Name=comp112835_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=409;mismatches=0;indels=0;unknowns=0;Target=comp112835_c0_seq1 409 1 .;CDS_Target=comp112835_c0_seq1 356 246 .;locus=RLOC_00013578
Chr1	stalkie_big_nohaplotig	exon	166654587	166654995	100	+	.	Parent=comp112835_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166654832	166654942	.	+	0	Parent=comp112835_c0_seq1.mrna1
Chr1	gffcl	locus	166663939	166667161	.	+	.	ID=RLOC_00013579;geneIDs=FBgn0261085.1.path1;transcripts=FBgn0261085.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166663939	166667161	.	+	.	ID=FBgn0261085.1.mrna1;geneID=FBgn0261085.1.path1;Name=FBgn0261085.1;Dir=sensecoverage=100.0;identity=100.0;matches=2543;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013579
Chr1	stalkie_big_nohaplotig	exon	166663939	166664175	100	+	.	Parent=FBgn0261085.1.mrna1;Target=FBgn0261085.1 1 237 +
Chr1	stalkie_big_nohaplotig	exon	166664239	166665662	100	+	.	Parent=FBgn0261085.1.mrna1;Target=FBgn0261085.1 238 1661 +
Chr1	stalkie_big_nohaplotig	exon	166665957	166666101	100	+	.	Parent=FBgn0261085.1.mrna1;Target=FBgn0261085.1 1662 1806 +
Chr1	stalkie_big_nohaplotig	exon	166666198	166666321	100	+	.	Parent=FBgn0261085.1.mrna1;Target=FBgn0261085.1 1807 1930 +
Chr1	stalkie_big_nohaplotig	exon	166666393	166666628	100	+	.	Parent=FBgn0261085.1.mrna1;Target=FBgn0261085.1 1931 2166 +
Chr1	stalkie_big_nohaplotig	exon	166666730	166666943	100	+	.	Parent=FBgn0261085.1.mrna1;Target=FBgn0261085.1 2167 2380 +
Chr1	stalkie_big_nohaplotig	exon	166666998	166667161	99	+	.	Parent=FBgn0261085.1.mrna1;Target=FBgn0261085.1 2381 2544 +
Chr1	stalkie_big_nohaplotig	CDS	166663939	166664175	.	+	0	Parent=FBgn0261085.1.mrna1;Target=FBgn0261085.1 1 237 +
Chr1	stalkie_big_nohaplotig	CDS	166664239	166665662	.	+	0	Parent=FBgn0261085.1.mrna1;Target=FBgn0261085.1 238 1661 +
Chr1	stalkie_big_nohaplotig	CDS	166665957	166666101	.	+	1	Parent=FBgn0261085.1.mrna1;Target=FBgn0261085.1 1662 1806 +
Chr1	stalkie_big_nohaplotig	CDS	166666198	166666321	.	+	0	Parent=FBgn0261085.1.mrna1;Target=FBgn0261085.1 1807 1930 +
Chr1	stalkie_big_nohaplotig	CDS	166666393	166666628	.	+	2	Parent=FBgn0261085.1.mrna1;Target=FBgn0261085.1 1931 2166 +
Chr1	stalkie_big_nohaplotig	CDS	166666730	166666943	.	+	0	Parent=FBgn0261085.1.mrna1;Target=FBgn0261085.1 2167 2380 +
Chr1	stalkie_big_nohaplotig	CDS	166666998	166667161	.	+	2	Parent=FBgn0261085.1.mrna1;Target=FBgn0261085.1 2381 2544 +
Chr1	gffcl	locus	166667864	166668912	.	-	.	ID=RLOC_00013580;geneIDs=comp134971_c1_seq1.path1;transcripts=comp134971_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166667864	166668912	.	-	.	ID=comp134971_c1_seq1.mrna1;geneID=comp134971_c1_seq1.path1;Name=comp134971_c1_seq1;Dir=indeterminatecoverage=91.1;identity=100.0;matches=1049;mismatches=0;indels=0;unknowns=0;Target=comp134971_c1_seq1 1152 104 .;CDS_Target=comp134971_c1_seq1 1045 749 .;locus=RLOC_00013580
Chr1	stalkie_big_nohaplotig	exon	166667864	166668912	100	-	.	Parent=comp134971_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166667971	166668267	.	-	0	Parent=comp134971_c1_seq1.mrna1
Chr1	gffcl	locus	166669194	166670624	.	+	.	ID=RLOC_00013581;geneIDs=comp115591_c0_seq1.path1,comp135076_c0_seq1.path1;transcripts=comp115591_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166669856	166670624	.	+	.	ID=comp115591_c0_seq1.mrna1;geneID=comp115591_c0_seq1.path1;Name=comp115591_c0_seq1;Dir=indeterminatecoverage=98.1;identity=100.0;matches=769;mismatches=0;indels=0;unknowns=0;Target=comp115591_c0_seq1 784 16 .;CDS_Target=comp115591_c0_seq1 229 74 .;locus=RLOC_00013581
Chr1	stalkie_big_nohaplotig	exon	166669856	166670624	100	+	.	Parent=comp115591_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166669914	166670069	.	+	0	Parent=comp115591_c0_seq1.mrna1
Chr1	gffcl	locus	166670828	166671083	.	+	.	ID=RLOC_00013582;geneIDs=comp149387_c0_seq1.path1;transcripts=comp149387_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166670828	166671083	.	+	.	ID=comp149387_c0_seq1.mrna1;geneID=comp149387_c0_seq1.path1;Name=comp149387_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=253;mismatches=3;indels=0;unknowns=0;Target=comp149387_c0_seq1 256 1 .;CDS_Target=comp149387_c0_seq1 254 186 .;locus=RLOC_00013582
Chr1	stalkie_big_nohaplotig	exon	166670828	166671083	98	+	.	Parent=comp149387_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166671013	166671081	.	+	0	Parent=comp149387_c0_seq1.mrna1
Chr1	gffcl	locus	166681450	166681822	.	+	.	ID=RLOC_00013583;geneIDs=comp156174_c1_seq1.path1;transcripts=comp156174_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166681450	166681822	.	+	.	ID=comp156174_c1_seq1.mrna1;geneID=comp156174_c1_seq1.path1;Name=comp156174_c1_seq1;Dir=indeterminatecoverage=100.0;identity=95.2;matches=355;mismatches=11;indels=7;unknowns=0;Target=comp156174_c1_seq1 366 1 .;CDS_Target=comp156174_c1_seq1 249 94 .;locus=RLOC_00013583
Chr1	stalkie_big_nohaplotig	exon	166681450	166681822	95	+	.	Parent=comp156174_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166681550	166681705	.	+	0	Parent=comp156174_c1_seq1.mrna1
Chr1	gffcl	locus	166688171	166690668	.	-	.	ID=RLOC_00013585;geneIDs=FBgn0030641.1.path1;transcripts=FBgn0030641.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166688171	166690668	.	-	.	ID=FBgn0030641.1.mrna1;geneID=FBgn0030641.1.path1;Name=FBgn0030641.1;Dir=sensecoverage=100.0;identity=99.8;matches=542;mismatches=0;indels=1;unknowns=0;locus=RLOC_00013585
Chr1	stalkie_big_nohaplotig	exon	166688171	166688335	100	-	.	Parent=FBgn0030641.1.mrna1;Target=FBgn0030641.1 379 543 +
Chr1	stalkie_big_nohaplotig	exon	166688392	166688649	100	-	.	Parent=FBgn0030641.1.mrna1;Target=FBgn0030641.1 121 378 +
Chr1	stalkie_big_nohaplotig	exon	166688706	166688761	98	-	.	Parent=FBgn0030641.1.mrna1;Target=FBgn0030641.1 64 120 +
Chr1	stalkie_big_nohaplotig	exon	166690606	166690668	100	-	.	Parent=FBgn0030641.1.mrna1;Target=FBgn0030641.1 1 63 +
Chr1	stalkie_big_nohaplotig	CDS	166688728	166688761	.	-	2	Parent=FBgn0030641.1.mrna1;Target=FBgn0030641.1 64 98 +
Chr1	stalkie_big_nohaplotig	CDS	166690606	166690666	.	-	0	Parent=FBgn0030641.1.mrna1;Target=FBgn0030641.1 3 63 +
Chr1	gffcl	locus	166691393	166692897	.	-	.	ID=RLOC_00013586;geneIDs=FBgn0030640.1.path1;transcripts=FBgn0030640.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166691393	166692897	.	-	.	ID=FBgn0030640.1.mrna1;geneID=FBgn0030640.1.path1;Name=FBgn0030640.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1503;mismatches=2;indels=4;unknowns=0;Target=FBgn0030640.1 1509 1 .;CDS_Target=FBgn0030640.1 92 3 .;locus=RLOC_00013586
Chr1	stalkie_big_nohaplotig	exon	166691393	166692897	99	-	.	Parent=FBgn0030640.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166692810	166692895	.	-	0	Parent=FBgn0030640.1.mrna1
Chr1	gffcl	locus	166697078	166698278	.	-	.	ID=RLOC_00013587;geneIDs=FBgn0030465.1.path1;transcripts=FBgn0030465.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166697078	166698278	.	-	.	ID=FBgn0030465.1.mrna1;geneID=FBgn0030465.1.path1;Name=FBgn0030465.1;Dir=sensecoverage=100.0;identity=100.0;matches=1071;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013587
Chr1	stalkie_big_nohaplotig	exon	166697078	166697610	100	-	.	Parent=FBgn0030465.1.mrna1;Target=FBgn0030465.1 539 1071 +
Chr1	stalkie_big_nohaplotig	exon	166697672	166697915	100	-	.	Parent=FBgn0030465.1.mrna1;Target=FBgn0030465.1 295 538 +
Chr1	stalkie_big_nohaplotig	exon	166697985	166698278	100	-	.	Parent=FBgn0030465.1.mrna1;Target=FBgn0030465.1 1 294 +
Chr1	stalkie_big_nohaplotig	CDS	166697078	166697610	.	-	2	Parent=FBgn0030465.1.mrna1;Target=FBgn0030465.1 539 1071 +
Chr1	stalkie_big_nohaplotig	CDS	166697672	166697915	.	-	0	Parent=FBgn0030465.1.mrna1;Target=FBgn0030465.1 295 538 +
Chr1	stalkie_big_nohaplotig	CDS	166697985	166698278	.	-	0	Parent=FBgn0030465.1.mrna1;Target=FBgn0030465.1 1 294 +
Chr1	gffcl	locus	166700897	166704378	.	+	.	ID=RLOC_00013588;geneIDs=FBgn0008635.1.path1;transcripts=FBgn0008635.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166700897	166704378	.	+	.	ID=FBgn0008635.1.mrna1;geneID=FBgn0008635.1.path1;Name=FBgn0008635.1;Dir=sensecoverage=100.0;identity=100.0;matches=2952;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013588
Chr1	stalkie_big_nohaplotig	exon	166700897	166701301	100	+	.	Parent=FBgn0008635.1.mrna1;Target=FBgn0008635.1 1 405 +
Chr1	stalkie_big_nohaplotig	exon	166701361	166702643	100	+	.	Parent=FBgn0008635.1.mrna1;Target=FBgn0008635.1 406 1688 +
Chr1	stalkie_big_nohaplotig	exon	166702700	166702829	100	+	.	Parent=FBgn0008635.1.mrna1;Target=FBgn0008635.1 1689 1818 +
Chr1	stalkie_big_nohaplotig	exon	166702900	166703425	100	+	.	Parent=FBgn0008635.1.mrna1;Target=FBgn0008635.1 1819 2344 +
Chr1	stalkie_big_nohaplotig	exon	166703485	166703646	100	+	.	Parent=FBgn0008635.1.mrna1;Target=FBgn0008635.1 2345 2506 +
Chr1	stalkie_big_nohaplotig	exon	166703761	166703897	100	+	.	Parent=FBgn0008635.1.mrna1;Target=FBgn0008635.1 2507 2643 +
Chr1	stalkie_big_nohaplotig	exon	166703966	166704102	100	+	.	Parent=FBgn0008635.1.mrna1;Target=FBgn0008635.1 2644 2780 +
Chr1	stalkie_big_nohaplotig	exon	166704154	166704259	100	+	.	Parent=FBgn0008635.1.mrna1;Target=FBgn0008635.1 2781 2886 +
Chr1	stalkie_big_nohaplotig	exon	166704313	166704378	100	+	.	Parent=FBgn0008635.1.mrna1;Target=FBgn0008635.1 2887 2952 +
Chr1	stalkie_big_nohaplotig	CDS	166700897	166701301	.	+	0	Parent=FBgn0008635.1.mrna1;Target=FBgn0008635.1 1 405 +
Chr1	stalkie_big_nohaplotig	CDS	166701361	166702643	.	+	0	Parent=FBgn0008635.1.mrna1;Target=FBgn0008635.1 406 1688 +
Chr1	stalkie_big_nohaplotig	CDS	166702700	166702829	.	+	1	Parent=FBgn0008635.1.mrna1;Target=FBgn0008635.1 1689 1818 +
Chr1	stalkie_big_nohaplotig	CDS	166702900	166703425	.	+	0	Parent=FBgn0008635.1.mrna1;Target=FBgn0008635.1 1819 2344 +
Chr1	stalkie_big_nohaplotig	CDS	166703485	166703646	.	+	2	Parent=FBgn0008635.1.mrna1;Target=FBgn0008635.1 2345 2506 +
Chr1	stalkie_big_nohaplotig	CDS	166703761	166703897	.	+	2	Parent=FBgn0008635.1.mrna1;Target=FBgn0008635.1 2507 2643 +
Chr1	stalkie_big_nohaplotig	CDS	166703966	166704102	.	+	0	Parent=FBgn0008635.1.mrna1;Target=FBgn0008635.1 2644 2780 +
Chr1	stalkie_big_nohaplotig	CDS	166704154	166704259	.	+	1	Parent=FBgn0008635.1.mrna1;Target=FBgn0008635.1 2781 2886 +
Chr1	stalkie_big_nohaplotig	CDS	166704313	166704378	.	+	0	Parent=FBgn0008635.1.mrna1;Target=FBgn0008635.1 2887 2952 +
Chr1	gffcl	locus	166704955	166706494	.	+	.	ID=RLOC_00013589;geneIDs=FBgn0030683.1.path1;transcripts=FBgn0030683.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166704955	166706494	.	+	.	ID=FBgn0030683.1.mrna1;geneID=FBgn0030683.1.path1;Name=FBgn0030683.1;Dir=sensecoverage=100.0;identity=100.0;matches=1218;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013589
Chr1	stalkie_big_nohaplotig	exon	166704955	166705048	100	+	.	Parent=FBgn0030683.1.mrna1;Target=FBgn0030683.1 1 94 +
Chr1	stalkie_big_nohaplotig	exon	166705115	166705185	100	+	.	Parent=FBgn0030683.1.mrna1;Target=FBgn0030683.1 95 165 +
Chr1	stalkie_big_nohaplotig	exon	166705264	166705381	100	+	.	Parent=FBgn0030683.1.mrna1;Target=FBgn0030683.1 166 283 +
Chr1	stalkie_big_nohaplotig	exon	166705435	166705656	100	+	.	Parent=FBgn0030683.1.mrna1;Target=FBgn0030683.1 284 505 +
Chr1	stalkie_big_nohaplotig	exon	166705721	166706283	100	+	.	Parent=FBgn0030683.1.mrna1;Target=FBgn0030683.1 506 1068 +
Chr1	stalkie_big_nohaplotig	exon	166706345	166706494	100	+	.	Parent=FBgn0030683.1.mrna1;Target=FBgn0030683.1 1069 1218 +
Chr1	stalkie_big_nohaplotig	CDS	166704955	166705048	.	+	0	Parent=FBgn0030683.1.mrna1;Target=FBgn0030683.1 1 94 +
Chr1	stalkie_big_nohaplotig	CDS	166705115	166705185	.	+	2	Parent=FBgn0030683.1.mrna1;Target=FBgn0030683.1 95 165 +
Chr1	stalkie_big_nohaplotig	CDS	166705264	166705381	.	+	0	Parent=FBgn0030683.1.mrna1;Target=FBgn0030683.1 166 283 +
Chr1	stalkie_big_nohaplotig	CDS	166705435	166705656	.	+	2	Parent=FBgn0030683.1.mrna1;Target=FBgn0030683.1 284 505 +
Chr1	stalkie_big_nohaplotig	CDS	166705721	166706283	.	+	2	Parent=FBgn0030683.1.mrna1;Target=FBgn0030683.1 506 1068 +
Chr1	stalkie_big_nohaplotig	CDS	166706345	166706494	.	+	0	Parent=FBgn0030683.1.mrna1;Target=FBgn0030683.1 1069 1218 +
Chr1	gffcl	locus	166707307	166710004	.	-	.	ID=RLOC_00013590;geneIDs=FBgn0020309.6.path1;transcripts=FBgn0020309.6.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166707307	166710004	.	-	.	ID=FBgn0020309.6.mrna1;geneID=FBgn0020309.6.path1;Name=FBgn0020309.6;Dir=sensecoverage=100.0;identity=100.0;matches=2292;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013590
Chr1	stalkie_big_nohaplotig	exon	166707307	166707619	100	-	.	Parent=FBgn0020309.6.mrna1;Target=FBgn0020309.6 1980 2292 +
Chr1	stalkie_big_nohaplotig	exon	166707685	166708028	100	-	.	Parent=FBgn0020309.6.mrna1;Target=FBgn0020309.6 1636 1979 +
Chr1	stalkie_big_nohaplotig	exon	166708090	166708872	100	-	.	Parent=FBgn0020309.6.mrna1;Target=FBgn0020309.6 853 1635 +
Chr1	stalkie_big_nohaplotig	exon	166708965	166709496	100	-	.	Parent=FBgn0020309.6.mrna1;Target=FBgn0020309.6 321 852 +
Chr1	stalkie_big_nohaplotig	exon	166709685	166710004	100	-	.	Parent=FBgn0020309.6.mrna1;Target=FBgn0020309.6 1 320 +
Chr1	stalkie_big_nohaplotig	CDS	166707307	166707619	.	-	1	Parent=FBgn0020309.6.mrna1;Target=FBgn0020309.6 1980 2292 +
Chr1	stalkie_big_nohaplotig	CDS	166707685	166708028	.	-	0	Parent=FBgn0020309.6.mrna1;Target=FBgn0020309.6 1636 1979 +
Chr1	stalkie_big_nohaplotig	CDS	166708090	166708872	.	-	0	Parent=FBgn0020309.6.mrna1;Target=FBgn0020309.6 853 1635 +
Chr1	stalkie_big_nohaplotig	CDS	166708965	166709496	.	-	1	Parent=FBgn0020309.6.mrna1;Target=FBgn0020309.6 321 852 +
Chr1	stalkie_big_nohaplotig	CDS	166709685	166710004	.	-	0	Parent=FBgn0020309.6.mrna1;Target=FBgn0020309.6 1 320 +
Chr1	gffcl	locus	166715181	166720760	.	+	.	ID=RLOC_00013591;geneIDs=FBgn0045073.1.path1;transcripts=FBgn0045073.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166715181	166720760	.	+	.	ID=FBgn0045073.1.mrna1;geneID=FBgn0045073.1.path1;Name=FBgn0045073.1;Dir=sensecoverage=100.0;identity=100.0;matches=1779;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013591
Chr1	stalkie_big_nohaplotig	exon	166715181	166715613	100	+	.	Parent=FBgn0045073.1.mrna1;Target=FBgn0045073.1 1 433 +
Chr1	stalkie_big_nohaplotig	exon	166716823	166716986	100	+	.	Parent=FBgn0045073.1.mrna1;Target=FBgn0045073.1 434 597 +
Chr1	stalkie_big_nohaplotig	exon	166717194	166717313	100	+	.	Parent=FBgn0045073.1.mrna1;Target=FBgn0045073.1 598 717 +
Chr1	stalkie_big_nohaplotig	exon	166717381	166717493	100	+	.	Parent=FBgn0045073.1.mrna1;Target=FBgn0045073.1 718 830 +
Chr1	stalkie_big_nohaplotig	exon	166719610	166719725	100	+	.	Parent=FBgn0045073.1.mrna1;Target=FBgn0045073.1 831 946 +
Chr1	stalkie_big_nohaplotig	exon	166719801	166719973	100	+	.	Parent=FBgn0045073.1.mrna1;Target=FBgn0045073.1 947 1119 +
Chr1	stalkie_big_nohaplotig	exon	166720036	166720603	100	+	.	Parent=FBgn0045073.1.mrna1;Target=FBgn0045073.1 1120 1687 +
Chr1	stalkie_big_nohaplotig	exon	166720669	166720760	100	+	.	Parent=FBgn0045073.1.mrna1;Target=FBgn0045073.1 1688 1779 +
Chr1	stalkie_big_nohaplotig	CDS	166715181	166715613	.	+	0	Parent=FBgn0045073.1.mrna1;Target=FBgn0045073.1 1 433 +
Chr1	stalkie_big_nohaplotig	CDS	166716823	166716986	.	+	2	Parent=FBgn0045073.1.mrna1;Target=FBgn0045073.1 434 597 +
Chr1	stalkie_big_nohaplotig	CDS	166717194	166717313	.	+	0	Parent=FBgn0045073.1.mrna1;Target=FBgn0045073.1 598 717 +
Chr1	stalkie_big_nohaplotig	CDS	166717381	166717493	.	+	0	Parent=FBgn0045073.1.mrna1;Target=FBgn0045073.1 718 830 +
Chr1	stalkie_big_nohaplotig	CDS	166719610	166719725	.	+	1	Parent=FBgn0045073.1.mrna1;Target=FBgn0045073.1 831 946 +
Chr1	stalkie_big_nohaplotig	CDS	166719801	166719973	.	+	2	Parent=FBgn0045073.1.mrna1;Target=FBgn0045073.1 947 1119 +
Chr1	stalkie_big_nohaplotig	CDS	166720036	166720603	.	+	0	Parent=FBgn0045073.1.mrna1;Target=FBgn0045073.1 1120 1687 +
Chr1	stalkie_big_nohaplotig	CDS	166720669	166720760	.	+	2	Parent=FBgn0045073.1.mrna1;Target=FBgn0045073.1 1688 1779 +
Chr1	gffcl	locus	166723390	166725748	.	+	.	ID=RLOC_00013592;geneIDs=comp108622_c0_seq1.path1;transcripts=comp108622_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166723390	166725748	.	+	.	ID=comp108622_c0_seq1.mrna1;geneID=comp108622_c0_seq1.path1;Name=comp108622_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=422;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013592
Chr1	stalkie_big_nohaplotig	exon	166723390	166723413	100	+	.	Parent=comp108622_c0_seq1.mrna1;Target=comp108622_c0_seq1 399 422 -
Chr1	stalkie_big_nohaplotig	exon	166725351	166725748	100	+	.	Parent=comp108622_c0_seq1.mrna1;Target=comp108622_c0_seq1 1 398 -
Chr1	stalkie_big_nohaplotig	CDS	166723390	166723413	.	+	0	Parent=comp108622_c0_seq1.mrna1;Target=comp108622_c0_seq1 399 422 .
Chr1	stalkie_big_nohaplotig	CDS	166725351	166725401	.	+	0	Parent=comp108622_c0_seq1.mrna1;Target=comp108622_c0_seq1 348 398 .
Chr1	gffcl	locus	166724679	167186657	.	-	.	ID=RLOC_00013593;geneIDs=FBgn0033081.1.path1,comp108476_c0_seq1.path1,comp163482_c0_seq1.path1;transcripts=comp163482_c0_seq1.mrna1,FBgn0033081.1.mrna1,comp108476_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166724679	167186657	.	-	.	ID=comp163482_c0_seq1.mrna1;geneID=comp163482_c0_seq1.path1;Name=comp163482_c0_seq1;Dir=indeterminatecoverage=73.9;identity=83.0;matches=2366;mismatches=191;indels=294;unknowns=0;locus=RLOC_00013593
Chr1	stalkie_big_nohaplotig	exon	166724679	166724694	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2983 2968 .
Chr1	stalkie_big_nohaplotig	exon	166745564	166745566	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2967 2965 .
Chr1	stalkie_big_nohaplotig	exon	166748989	166749026	39	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2964 2892 .
Chr1	stalkie_big_nohaplotig	exon	166761582	166761590	88	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2891 2883 .
Chr1	stalkie_big_nohaplotig	exon	166761795	166761801	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2882 2876 .
Chr1	stalkie_big_nohaplotig	exon	166762003	166762004	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2875 2874 .
Chr1	stalkie_big_nohaplotig	exon	166769871	166769875	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2873 2869 .
Chr1	stalkie_big_nohaplotig	exon	166774851	166774856	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2868 2863 .
Chr1	stalkie_big_nohaplotig	exon	166776032	166776098	52	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2862 2798 .
Chr1	stalkie_big_nohaplotig	exon	166776773	166776787	73	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2787 2773 .
Chr1	stalkie_big_nohaplotig	exon	166782853	166782860	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2772 2765 .
Chr1	stalkie_big_nohaplotig	exon	166786890	166786894	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2763 2759 .
Chr1	stalkie_big_nohaplotig	exon	166788037	166788046	33	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2758 2735 .
Chr1	stalkie_big_nohaplotig	exon	166792618	166792687	43	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2734 2631 .
Chr1	stalkie_big_nohaplotig	exon	166812167	166812177	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2586 2576 .
Chr1	stalkie_big_nohaplotig	exon	166821048	166821051	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2575 2572 .
Chr1	stalkie_big_nohaplotig	exon	166856238	166856249	91	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2503 2492 .
Chr1	stalkie_big_nohaplotig	exon	166862737	166862765	65	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2491 2470 .
Chr1	stalkie_big_nohaplotig	exon	166877621	166877644	27	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2469 2387 .
Chr1	stalkie_big_nohaplotig	exon	166882361	166882366	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2386 2381 .
Chr1	stalkie_big_nohaplotig	exon	166889294	166889338	52	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2380 2318 .
Chr1	stalkie_big_nohaplotig	exon	166916081	166916089	88	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2317 2309 .
Chr1	stalkie_big_nohaplotig	exon	166922775	166922781	85	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2308 2302 .
Chr1	stalkie_big_nohaplotig	exon	166927950	166927953	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2301 2298 .
Chr1	stalkie_big_nohaplotig	exon	166927958	166927961	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2240 2237 .
Chr1	stalkie_big_nohaplotig	exon	166938293	166938301	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2236 2228 .
Chr1	stalkie_big_nohaplotig	exon	166942458	166942489	40	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2227 2201 .
Chr1	stalkie_big_nohaplotig	exon	166944292	166944329	36	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2183 2110 .
Chr1	stalkie_big_nohaplotig	exon	166961090	166961098	77	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2109 2101 .
Chr1	stalkie_big_nohaplotig	exon	166966885	166966894	90	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2100 2091 .
Chr1	stalkie_big_nohaplotig	exon	166972472	166972475	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2090 2087 .
Chr1	stalkie_big_nohaplotig	exon	166979348	166979352	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2086 2082 .
Chr1	stalkie_big_nohaplotig	exon	166984227	166984233	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2081 2075 .
Chr1	stalkie_big_nohaplotig	exon	167000025	167000031	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2074 2068 .
Chr1	stalkie_big_nohaplotig	exon	167017644	167017653	90	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2067 2058 .
Chr1	stalkie_big_nohaplotig	exon	167029195	167029234	22	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2057 2048 .
Chr1	stalkie_big_nohaplotig	exon	167036493	167036497	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2047 2043 .
Chr1	stalkie_big_nohaplotig	exon	167047075	167047084	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2042 2033 .
Chr1	stalkie_big_nohaplotig	exon	167047361	167047436	51	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 2032 1965 .
Chr1	stalkie_big_nohaplotig	exon	167138525	167138533	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 1964 1956 .
Chr1	stalkie_big_nohaplotig	exon	167159207	167159447	97	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 1955 1715 .
Chr1	stalkie_big_nohaplotig	exon	167178021	167178662	98	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 1714 1075 .
Chr1	stalkie_big_nohaplotig	exon	167179994	167180072	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 1074 996 .
Chr1	stalkie_big_nohaplotig	exon	167181457	167181503	82	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 995 946 .
Chr1	stalkie_big_nohaplotig	exon	167181807	167181936	97	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 945 816 .
Chr1	stalkie_big_nohaplotig	exon	167182138	167182216	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 815 737 .
Chr1	stalkie_big_nohaplotig	exon	167183333	167183411	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 736 658 .
Chr1	stalkie_big_nohaplotig	exon	167184068	167184275	100	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 657 450 .
Chr1	stalkie_big_nohaplotig	exon	167184475	167184543	81	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 449 368 .
Chr1	stalkie_big_nohaplotig	exon	167184753	167184872	93	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 367 247 .
Chr1	stalkie_big_nohaplotig	exon	167185489	167185522	94	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 246 213 .
Chr1	stalkie_big_nohaplotig	exon	167186282	167186349	88	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 212 151 .
Chr1	stalkie_big_nohaplotig	exon	167186523	167186657	81	-	.	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 150 1 .
Chr1	stalkie_big_nohaplotig	CDS	167184150	167184275	.	-	0	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 575 450 .
Chr1	stalkie_big_nohaplotig	CDS	167184475	167184483	.	-	0	Parent=comp163482_c0_seq1.mrna1;Target=comp163482_c0_seq1 449 441 .
Chr1	stalkie_big_nohaplotig	mRNA	166761865	166762767	.	-	.	ID=FBgn0033081.1.mrna1;geneID=FBgn0033081.1.path1;Name=FBgn0033081.1;Dir=sensecoverage=100.0;identity=100.0;matches=621;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013593
Chr1	stalkie_big_nohaplotig	exon	166761865	166762303	100	-	.	Parent=FBgn0033081.1.mrna1;Target=FBgn0033081.1 183 621 +
Chr1	stalkie_big_nohaplotig	exon	166762396	166762505	100	-	.	Parent=FBgn0033081.1.mrna1;Target=FBgn0033081.1 73 182 +
Chr1	stalkie_big_nohaplotig	exon	166762696	166762767	100	-	.	Parent=FBgn0033081.1.mrna1;Target=FBgn0033081.1 1 72 +
Chr1	stalkie_big_nohaplotig	CDS	166761865	166762303	.	-	1	Parent=FBgn0033081.1.mrna1;Target=FBgn0033081.1 183 621 +
Chr1	stalkie_big_nohaplotig	CDS	166762396	166762505	.	-	0	Parent=FBgn0033081.1.mrna1;Target=FBgn0033081.1 73 182 +
Chr1	stalkie_big_nohaplotig	CDS	166762696	166762767	.	-	0	Parent=FBgn0033081.1.mrna1;Target=FBgn0033081.1 1 72 +
Chr1	stalkie_big_nohaplotig	mRNA	166792549	166793746	.	-	.	ID=comp108476_c0_seq1.mrna1;geneID=comp108476_c0_seq1.path1;Name=comp108476_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1191;mismatches=7;indels=0;unknowns=0;Target=comp108476_c0_seq1 1198 1 .;CDS_Target=comp108476_c0_seq1 235 101 .;locus=RLOC_00013593
Chr1	stalkie_big_nohaplotig	exon	166792549	166793746	99	-	.	Parent=comp108476_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166793512	166793646	.	-	0	Parent=comp108476_c0_seq1.mrna1
Chr1	gffcl	locus	166729466	166729899	.	+	.	ID=RLOC_00013594;geneIDs=comp649975_c0_seq1.path1;transcripts=comp649975_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166729466	166729899	.	+	.	ID=comp649975_c0_seq1.mrna1;geneID=comp649975_c0_seq1.path1;Name=comp649975_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=434;mismatches=0;indels=0;unknowns=0;Target=comp649975_c0_seq1 434 1 .;CDS_Target=comp649975_c0_seq1 94 2 .;locus=RLOC_00013594
Chr1	stalkie_big_nohaplotig	exon	166729466	166729899	100	+	.	Parent=comp649975_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166729467	166729559	.	+	0	Parent=comp649975_c0_seq1.mrna1
Chr1	gffcl	locus	166729982	166730270	.	-	.	ID=RLOC_00013595;geneIDs=comp54275_c0_seq1.path1;transcripts=comp54275_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166729982	166730270	.	-	.	ID=comp54275_c0_seq1.mrna1;geneID=comp54275_c0_seq1.path1;Name=comp54275_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=287;mismatches=2;indels=1;unknowns=0;Target=comp54275_c0_seq1 290 1 .;CDS_Target=comp54275_c0_seq1 98 3 .;locus=RLOC_00013595
Chr1	stalkie_big_nohaplotig	exon	166729982	166730270	98	-	.	Parent=comp54275_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166730173	166730268	.	-	0	Parent=comp54275_c0_seq1.mrna1
Chr1	gffcl	locus	166753469	166754398	.	+	.	ID=RLOC_00013597;geneIDs=comp51640_c0_seq1.path1;transcripts=comp51640_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166753469	166754398	.	+	.	ID=comp51640_c0_seq1.mrna1;geneID=comp51640_c0_seq1.path1;Name=comp51640_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=930;mismatches=0;indels=0;unknowns=0;Target=comp51640_c0_seq1 930 1 .;CDS_Target=comp51640_c0_seq1 847 764 .;locus=RLOC_00013597
Chr1	stalkie_big_nohaplotig	exon	166753469	166754398	100	+	.	Parent=comp51640_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166754232	166754315	.	+	0	Parent=comp51640_c0_seq1.mrna1
Chr1	gffcl	locus	166756311	166759079	.	+	.	ID=RLOC_00013598;geneIDs=AGAP000177.1.path1;transcripts=AGAP000177.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166756311	166759079	.	+	.	ID=AGAP000177.1.mrna1;geneID=AGAP000177.1.path1;Name=AGAP000177.1;Dir=sensecoverage=100.0;identity=100.0;matches=363;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013598
Chr1	stalkie_big_nohaplotig	exon	166756311	166756472	100	+	.	Parent=AGAP000177.1.mrna1;Target=AGAP000177.1 1 162 +
Chr1	stalkie_big_nohaplotig	exon	166758820	166758900	100	+	.	Parent=AGAP000177.1.mrna1;Target=AGAP000177.1 163 243 +
Chr1	stalkie_big_nohaplotig	exon	166758960	166759079	100	+	.	Parent=AGAP000177.1.mrna1;Target=AGAP000177.1 244 363 +
Chr1	stalkie_big_nohaplotig	CDS	166756311	166756472	.	+	0	Parent=AGAP000177.1.mrna1;Target=AGAP000177.1 1 162 +
Chr1	stalkie_big_nohaplotig	CDS	166758820	166758900	.	+	0	Parent=AGAP000177.1.mrna1;Target=AGAP000177.1 163 243 +
Chr1	stalkie_big_nohaplotig	CDS	166758960	166759079	.	+	0	Parent=AGAP000177.1.mrna1;Target=AGAP000177.1 244 363 +
Chr1	gffcl	locus	166767385	166769277	.	+	.	ID=RLOC_00013599;geneIDs=FBgn0002914.1.path1;transcripts=FBgn0002914.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166767385	166769277	.	+	.	ID=FBgn0002914.1.mrna1;geneID=FBgn0002914.1.path1;Name=FBgn0002914.1;Dir=sensecoverage=100.0;identity=100.0;matches=1821;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013599
Chr1	stalkie_big_nohaplotig	exon	166767385	166768549	100	+	.	Parent=FBgn0002914.1.mrna1;Target=FBgn0002914.1 1 1165 +
Chr1	stalkie_big_nohaplotig	exon	166768622	166769277	100	+	.	Parent=FBgn0002914.1.mrna1;Target=FBgn0002914.1 1166 1821 +
Chr1	stalkie_big_nohaplotig	CDS	166767385	166768549	.	+	0	Parent=FBgn0002914.1.mrna1;Target=FBgn0002914.1 1 1165 +
Chr1	stalkie_big_nohaplotig	CDS	166768622	166769277	.	+	2	Parent=FBgn0002914.1.mrna1;Target=FBgn0002914.1 1166 1821 +
Chr1	gffcl	locus	166770012	166772170	.	-	.	ID=RLOC_00013600;geneIDs=FBgn0029818.1.path1;transcripts=FBgn0029818.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166770012	166772170	.	-	.	ID=FBgn0029818.1.mrna1;geneID=FBgn0029818.1.path1;Name=FBgn0029818.1;Dir=sensecoverage=100.0;identity=100.0;matches=1941;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013600
Chr1	stalkie_big_nohaplotig	exon	166770012	166770128	100	-	.	Parent=FBgn0029818.1.mrna1;Target=FBgn0029818.1 1825 1941 +
Chr1	stalkie_big_nohaplotig	exon	166770185	166771275	100	-	.	Parent=FBgn0029818.1.mrna1;Target=FBgn0029818.1 734 1824 +
Chr1	stalkie_big_nohaplotig	exon	166771334	166771525	100	-	.	Parent=FBgn0029818.1.mrna1;Target=FBgn0029818.1 542 733 +
Chr1	stalkie_big_nohaplotig	exon	166771576	166771926	100	-	.	Parent=FBgn0029818.1.mrna1;Target=FBgn0029818.1 191 541 +
Chr1	stalkie_big_nohaplotig	exon	166771981	166772170	100	-	.	Parent=FBgn0029818.1.mrna1;Target=FBgn0029818.1 1 190 +
Chr1	stalkie_big_nohaplotig	CDS	166770012	166770128	.	-	0	Parent=FBgn0029818.1.mrna1;Target=FBgn0029818.1 1825 1941 +
Chr1	stalkie_big_nohaplotig	CDS	166770185	166771275	.	-	2	Parent=FBgn0029818.1.mrna1;Target=FBgn0029818.1 734 1824 +
Chr1	stalkie_big_nohaplotig	CDS	166771334	166771525	.	-	2	Parent=FBgn0029818.1.mrna1;Target=FBgn0029818.1 542 733 +
Chr1	stalkie_big_nohaplotig	CDS	166771576	166771926	.	-	2	Parent=FBgn0029818.1.mrna1;Target=FBgn0029818.1 191 541 +
Chr1	stalkie_big_nohaplotig	CDS	166771981	166772170	.	-	0	Parent=FBgn0029818.1.mrna1;Target=FBgn0029818.1 1 190 +
Chr1	gffcl	locus	166772477	166774048	.	-	.	ID=RLOC_00013601;geneIDs=FBgn0014340.1.path1;transcripts=FBgn0014340.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166772477	166774048	.	-	.	ID=FBgn0014340.1.mrna1;geneID=FBgn0014340.1.path1;Name=FBgn0014340.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1572;mismatches=0;indels=0;unknowns=0;Target=FBgn0014340.1 1572 1 .;locus=RLOC_00013601
Chr1	stalkie_big_nohaplotig	exon	166772477	166774048	100	-	.	Parent=FBgn0014340.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166772477	166774048	.	-	0	Parent=FBgn0014340.1.mrna1
Chr1	gffcl	locus	166775356	166776371	.	+	.	ID=RLOC_00013602;geneIDs=FBgn0030863.1.path1;transcripts=FBgn0030863.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166775356	166776371	.	+	.	ID=FBgn0030863.1.mrna1;geneID=FBgn0030863.1.path1;Name=FBgn0030863.1;Dir=sensecoverage=100.0;identity=100.0;matches=636;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013602
Chr1	stalkie_big_nohaplotig	exon	166775356	166775391	100	+	.	Parent=FBgn0030863.1.mrna1;Target=FBgn0030863.1 1 36 +
Chr1	stalkie_big_nohaplotig	exon	166775459	166775606	100	+	.	Parent=FBgn0030863.1.mrna1;Target=FBgn0030863.1 37 184 +
Chr1	stalkie_big_nohaplotig	exon	166775857	166776176	100	+	.	Parent=FBgn0030863.1.mrna1;Target=FBgn0030863.1 185 504 +
Chr1	stalkie_big_nohaplotig	exon	166776240	166776371	100	+	.	Parent=FBgn0030863.1.mrna1;Target=FBgn0030863.1 505 636 +
Chr1	stalkie_big_nohaplotig	CDS	166775356	166775391	.	+	0	Parent=FBgn0030863.1.mrna1;Target=FBgn0030863.1 1 36 +
Chr1	stalkie_big_nohaplotig	CDS	166775459	166775606	.	+	0	Parent=FBgn0030863.1.mrna1;Target=FBgn0030863.1 37 184 +
Chr1	stalkie_big_nohaplotig	CDS	166775857	166776176	.	+	2	Parent=FBgn0030863.1.mrna1;Target=FBgn0030863.1 185 504 +
Chr1	stalkie_big_nohaplotig	CDS	166776240	166776371	.	+	0	Parent=FBgn0030863.1.mrna1;Target=FBgn0030863.1 505 636 +
Chr1	gffcl	locus	166777158	166777551	.	-	.	ID=RLOC_00013603;geneIDs=comp948376_c0_seq1.path1;transcripts=comp948376_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166777158	166777551	.	-	.	ID=comp948376_c0_seq1.mrna1;geneID=comp948376_c0_seq1.path1;Name=comp948376_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=394;mismatches=0;indels=0;unknowns=0;Target=comp948376_c0_seq1 394 1 .;CDS_Target=comp948376_c0_seq1 128 39 .;locus=RLOC_00013603
Chr1	stalkie_big_nohaplotig	exon	166777158	166777551	100	-	.	Parent=comp948376_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166777424	166777513	.	-	0	Parent=comp948376_c0_seq1.mrna1
Chr1	gffcl	locus	166786850	166817441	.	+	.	ID=RLOC_00013604;geneIDs=FBgn0263258.1.path1,comp87773_c0_seq1.path1;transcripts=FBgn0263258.1.mrna1,comp87773_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166786850	166817441	.	+	.	ID=FBgn0263258.1.mrna1;geneID=FBgn0263258.1.path1;Name=FBgn0263258.1;Dir=sensecoverage=100.0;identity=100.0;matches=3918;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013604
Chr1	stalkie_big_nohaplotig	exon	166786850	166786969	100	+	.	Parent=FBgn0263258.1.mrna1;Target=FBgn0263258.1 1 120 +
Chr1	stalkie_big_nohaplotig	exon	166796534	166796591	100	+	.	Parent=FBgn0263258.1.mrna1;Target=FBgn0263258.1 121 178 +
Chr1	stalkie_big_nohaplotig	exon	166805520	166805689	100	+	.	Parent=FBgn0263258.1.mrna1;Target=FBgn0263258.1 179 348 +
Chr1	stalkie_big_nohaplotig	exon	166805759	166806007	100	+	.	Parent=FBgn0263258.1.mrna1;Target=FBgn0263258.1 349 597 +
Chr1	stalkie_big_nohaplotig	exon	166813925	166814212	100	+	.	Parent=FBgn0263258.1.mrna1;Target=FBgn0263258.1 598 885 +
Chr1	stalkie_big_nohaplotig	exon	166814278	166814494	100	+	.	Parent=FBgn0263258.1.mrna1;Target=FBgn0263258.1 886 1102 +
Chr1	stalkie_big_nohaplotig	exon	166814552	166816418	100	+	.	Parent=FBgn0263258.1.mrna1;Target=FBgn0263258.1 1103 2969 +
Chr1	stalkie_big_nohaplotig	exon	166816493	166817441	100	+	.	Parent=FBgn0263258.1.mrna1;Target=FBgn0263258.1 2970 3918 +
Chr1	stalkie_big_nohaplotig	CDS	166786850	166786969	.	+	0	Parent=FBgn0263258.1.mrna1;Target=FBgn0263258.1 1 120 +
Chr1	stalkie_big_nohaplotig	CDS	166796534	166796591	.	+	0	Parent=FBgn0263258.1.mrna1;Target=FBgn0263258.1 121 178 +
Chr1	stalkie_big_nohaplotig	CDS	166805520	166805689	.	+	2	Parent=FBgn0263258.1.mrna1;Target=FBgn0263258.1 179 348 +
Chr1	stalkie_big_nohaplotig	CDS	166805759	166806007	.	+	0	Parent=FBgn0263258.1.mrna1;Target=FBgn0263258.1 349 597 +
Chr1	stalkie_big_nohaplotig	CDS	166813925	166814212	.	+	0	Parent=FBgn0263258.1.mrna1;Target=FBgn0263258.1 598 885 +
Chr1	stalkie_big_nohaplotig	CDS	166814278	166814494	.	+	0	Parent=FBgn0263258.1.mrna1;Target=FBgn0263258.1 886 1102 +
Chr1	stalkie_big_nohaplotig	CDS	166814552	166816418	.	+	2	Parent=FBgn0263258.1.mrna1;Target=FBgn0263258.1 1103 2969 +
Chr1	stalkie_big_nohaplotig	CDS	166816493	166817441	.	+	1	Parent=FBgn0263258.1.mrna1;Target=FBgn0263258.1 2970 3918 +
Chr1	stalkie_big_nohaplotig	mRNA	166805986	166813948	.	+	.	ID=comp87773_c0_seq1.mrna1;geneID=comp87773_c0_seq1.path1;Name=comp87773_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=1415;mismatches=0;indels=0;unknowns=0;Target=comp87773_c0_seq1 218 307 .;locus=RLOC_00013604
Chr1	stalkie_big_nohaplotig	exon	166805986	166807376	100	+	.	Parent=comp87773_c0_seq1.mrna1;Target=comp87773_c0_seq1 25 1415 -
Chr1	stalkie_big_nohaplotig	exon	166813925	166813948	100	+	.	Parent=comp87773_c0_seq1.mrna1;Target=comp87773_c0_seq1 1 24 -
Chr1	stalkie_big_nohaplotig	CDS	166807094	166807183	.	+	0	Parent=comp87773_c0_seq1.mrna1
Chr1	gffcl	locus	166790800	166792505	.	+	.	ID=RLOC_00013605;geneIDs=comp118500_c0_seq1.path1;transcripts=comp118500_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166790800	166792505	.	+	.	ID=comp118500_c0_seq1.mrna1;geneID=comp118500_c0_seq1.path1;Name=comp118500_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.9;matches=1706;mismatches=0;indels=1;unknowns=0;Target=comp118500_c0_seq1 1707 1 .;CDS_Target=comp118500_c0_seq1 1705 1556 .;locus=RLOC_00013605
Chr1	stalkie_big_nohaplotig	exon	166790800	166792505	99	+	.	Parent=comp118500_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166792354	166792503	.	+	0	Parent=comp118500_c0_seq1.mrna1
Chr1	gffcl	locus	166820201	166820573	.	+	.	ID=RLOC_00013606;geneIDs=comp156174_c1_seq1.path3;transcripts=comp156174_c1_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	166820201	166820573	.	+	.	ID=comp156174_c1_seq1.mrna3;geneID=comp156174_c1_seq1.path3;Name=comp156174_c1_seq1;Dir=indeterminatecoverage=100.0;identity=94.1;matches=351;mismatches=15;indels=7;unknowns=0;Target=comp156174_c1_seq1 366 1 .;CDS_Target=comp156174_c1_seq1 249 94 .;locus=RLOC_00013606
Chr1	stalkie_big_nohaplotig	exon	166820201	166820573	94	+	.	Parent=comp156174_c1_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	166820301	166820456	.	+	0	Parent=comp156174_c1_seq1.mrna3
Chr1	gffcl	locus	166844968	166845506	.	+	.	ID=RLOC_00013607;geneIDs=Dp_FBgn0243941.path1;transcripts=Dp_FBgn0243941.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166844968	166845506	.	+	.	ID=Dp_FBgn0243941.mrna1;geneID=Dp_FBgn0243941.path1;Name=Dp_FBgn0243941;Dir=indeterminatecoverage=98.4;identity=96.1;matches=519;mismatches=20;indels=1;unknowns=0;Target=Dp_FBgn0243941 545 6 .;CDS_Target=Dp_FBgn0243941 543 7 .;locus=RLOC_00013607
Chr1	stalkie_big_nohaplotig	exon	166844968	166845506	96	+	.	Parent=Dp_FBgn0243941.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166844969	166845504	.	+	0	Parent=Dp_FBgn0243941.mrna1
Chr1	gffcl	locus	166868992	166869687	.	+	.	ID=RLOC_00013609;geneIDs=comp163159_c1_seq1.path1;transcripts=comp163159_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	166868992	166869687	.	+	.	ID=comp163159_c1_seq1.mrna1;geneID=comp163159_c1_seq1.path1;Name=comp163159_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=680;mismatches=16;indels=0;unknowns=0;Target=comp163159_c1_seq1 696 1 .;locus=RLOC_00013609
Chr1	stalkie_big_nohaplotig	exon	166868992	166869687	97	+	.	Parent=comp163159_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	166868992	166869687	.	+	0	Parent=comp163159_c1_seq1.mrna1
Chr1	gffcl	locus	166880844	166881539	.	+	.	ID=RLOC_00013610;geneIDs=comp163159_c1_seq1.path2;transcripts=comp163159_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	166880844	166881539	.	+	.	ID=comp163159_c1_seq1.mrna2;geneID=comp163159_c1_seq1.path2;Name=comp163159_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=680;mismatches=16;indels=0;unknowns=0;Target=comp163159_c1_seq1 696 1 .;locus=RLOC_00013610
Chr1	stalkie_big_nohaplotig	exon	166880844	166881539	97	+	.	Parent=comp163159_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	166880844	166881539	.	+	0	Parent=comp163159_c1_seq1.mrna2
Chr1	gffcl	locus	167033842	167039026	.	-	.	ID=RLOC_00013611;geneIDs=FBgn0021750.1.path1,comp150839_c1_seq1.path1,comp162468_c1_seq1.path1;transcripts=comp150839_c1_seq1.mrna1,FBgn0021750.1.mrna1,comp162468_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	167033842	167039026	.	-	.	ID=comp150839_c1_seq1.mrna1;geneID=comp150839_c1_seq1.path1;Name=comp150839_c1_seq1;Dir=sensecoverage=99.7;identity=99.9;matches=1586;mismatches=2;indels=0;unknowns=0;Target=comp150839_c1_seq1 163 828 +;locus=RLOC_00013611
Chr1	stalkie_big_nohaplotig	exon	167033842	167034046	100	-	.	Parent=comp150839_c1_seq1.mrna1;Target=comp150839_c1_seq1 1384 1588 +
Chr1	stalkie_big_nohaplotig	exon	167036868	167037234	99	-	.	Parent=comp150839_c1_seq1.mrna1;Target=comp150839_c1_seq1 1017 1383 +
Chr1	stalkie_big_nohaplotig	exon	167038011	167039026	99	-	.	Parent=comp150839_c1_seq1.mrna1;Target=comp150839_c1_seq1 1 1016 +
Chr1	stalkie_big_nohaplotig	CDS	167038199	167038864	.	-	0	Parent=comp150839_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	167033933	167038882	.	-	.	ID=FBgn0021750.1.mrna1;geneID=FBgn0021750.1.path1;Name=FBgn0021750.1;Dir=sensecoverage=100.0;identity=99.8;matches=1303;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013611
Chr1	stalkie_big_nohaplotig	exon	167033933	167034046	100	-	.	Parent=FBgn0021750.1.mrna1;Target=FBgn0021750.1 1192 1305 +
Chr1	stalkie_big_nohaplotig	exon	167036868	167037234	99	-	.	Parent=FBgn0021750.1.mrna1;Target=FBgn0021750.1 825 1191 +
Chr1	stalkie_big_nohaplotig	exon	167038011	167038183	100	-	.	Parent=FBgn0021750.1.mrna1;Target=FBgn0021750.1 652 824 +
Chr1	stalkie_big_nohaplotig	exon	167038232	167038882	99	-	.	Parent=FBgn0021750.1.mrna1;Target=FBgn0021750.1 1 651 +
Chr1	stalkie_big_nohaplotig	CDS	167033933	167034046	.	-	0	Parent=FBgn0021750.1.mrna1;Target=FBgn0021750.1 1192 1305 +
Chr1	stalkie_big_nohaplotig	CDS	167036868	167037234	.	-	1	Parent=FBgn0021750.1.mrna1;Target=FBgn0021750.1 825 1191 +
Chr1	stalkie_big_nohaplotig	CDS	167038011	167038183	.	-	0	Parent=FBgn0021750.1.mrna1;Target=FBgn0021750.1 652 824 +
Chr1	stalkie_big_nohaplotig	CDS	167038232	167038882	.	-	0	Parent=FBgn0021750.1.mrna1;Target=FBgn0021750.1 1 651 +
Chr1	stalkie_big_nohaplotig	mRNA	167034027	167036032	.	-	.	ID=comp162468_c1_seq1.mrna1;geneID=comp162468_c1_seq1.path1;Name=comp162468_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2005;mismatches=1;indels=0;unknowns=0;Target=comp162468_c1_seq1 2006 1 .;CDS_Target=comp162468_c1_seq1 283 191 .;locus=RLOC_00013611
Chr1	stalkie_big_nohaplotig	exon	167034027	167036032	99	-	.	Parent=comp162468_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	167035750	167035842	.	-	0	Parent=comp162468_c1_seq1.mrna1
Chr1	gffcl	locus	167049498	167049859	.	-	.	ID=RLOC_00013612;geneIDs=comp151573_c1_seq1.path2;transcripts=comp151573_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	167049498	167049859	.	-	.	ID=comp151573_c1_seq1.mrna2;geneID=comp151573_c1_seq1.path2;Name=comp151573_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=360;mismatches=2;indels=0;unknowns=0;Target=comp151573_c1_seq1 362 1 .;CDS_Target=comp151573_c1_seq1 120 1 .;locus=RLOC_00013612
Chr1	stalkie_big_nohaplotig	exon	167049498	167049859	99	-	.	Parent=comp151573_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	167049740	167049859	.	-	0	Parent=comp151573_c1_seq1.mrna2
Chr1	gffcl	locus	167052478	167052688	.	+	.	ID=RLOC_00013613;geneIDs=comp150287_c0_seq1.path8;transcripts=comp150287_c0_seq1.mrna8
Chr1	stalkie_big_nohaplotig	mRNA	167052478	167052688	.	+	.	ID=comp150287_c0_seq1.mrna8;geneID=comp150287_c0_seq1.path8;Name=comp150287_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=204;mismatches=7;indels=0;unknowns=0;Target=comp150287_c0_seq1 211 1 .;CDS_Target=comp150287_c0_seq1 211 2 .;locus=RLOC_00013613
Chr1	stalkie_big_nohaplotig	exon	167052478	167052688	96	+	.	Parent=comp150287_c0_seq1.mrna8
Chr1	stalkie_big_nohaplotig	CDS	167052479	167052688	.	+	0	Parent=comp150287_c0_seq1.mrna8
Chr1	gffcl	locus	167053524	167053871	.	-	.	ID=RLOC_00013614;geneIDs=comp152429_c1_seq1.path2;transcripts=comp152429_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	167053524	167053871	.	-	.	ID=comp152429_c1_seq1.mrna2;geneID=comp152429_c1_seq1.path2;Name=comp152429_c1_seq1;Dir=indeterminatecoverage=100.0;identity=92.8;matches=323;mismatches=25;indels=0;unknowns=0;Target=comp152429_c1_seq1 348 1 .;CDS_Target=comp152429_c1_seq1 348 307 .;locus=RLOC_00013614
Chr1	stalkie_big_nohaplotig	exon	167053524	167053871	92	-	.	Parent=comp152429_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	167053524	167053565	.	-	0	Parent=comp152429_c1_seq1.mrna2
Chr1	gffcl	locus	167060554	167060613	.	+	.	ID=RLOC_00013615;geneIDs=FBgn0032057.path1;transcripts=FBgn0032057.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	167060554	167060613	.	+	.	ID=FBgn0032057.mrna1;geneID=FBgn0032057.path1;Name=FBgn0032057;Dir=indeterminatecoverage=6.1;identity=100.0;matches=60;mismatches=0;indels=0;unknowns=0;Target=FBgn0032057 60 1 .;locus=RLOC_00013615
Chr1	stalkie_big_nohaplotig	exon	167060554	167060613	100	+	.	Parent=FBgn0032057.mrna1
Chr1	stalkie_big_nohaplotig	CDS	167060554	167060613	.	+	0	Parent=FBgn0032057.mrna1
Chr1	gffcl	locus	167159204	167178395	.	+	.	ID=RLOC_00013616;geneIDs=FBgn0031875.1.path1;transcripts=FBgn0031875.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	167159204	167178395	.	+	.	ID=FBgn0031875.1.mrna1;geneID=FBgn0031875.1.path1;Name=FBgn0031875.1;Dir=sensecoverage=33.6;identity=98.2;matches=608;mismatches=11;indels=0;unknowns=0;locus=RLOC_00013616
Chr1	stalkie_big_nohaplotig	exon	167159204	167159447	97	+	.	Parent=FBgn0031875.1.mrna1;Target=FBgn0031875.1 1227 1470 +
Chr1	stalkie_big_nohaplotig	exon	167178021	167178395	98	+	.	Parent=FBgn0031875.1.mrna1;Target=FBgn0031875.1 1471 1845 +
Chr1	stalkie_big_nohaplotig	CDS	167159205	167159447	.	+	0	Parent=FBgn0031875.1.mrna1;Target=FBgn0031875.1 1228 1470 +
Chr1	stalkie_big_nohaplotig	CDS	167178021	167178395	.	+	0	Parent=FBgn0031875.1.mrna1;Target=FBgn0031875.1 1471 1845 +
Chr1	gffcl	locus	167163057	167164154	.	-	.	ID=RLOC_00013617;geneIDs=ORF2175.path2;transcripts=ORF2175.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	167163057	167164154	.	-	.	ID=ORF2175.mrna2;geneID=ORF2175.path2;Name=ORF2175;Dir=sensecoverage=100.0;identity=99.1;matches=895;mismatches=8;indels=0;unknowns=0;locus=RLOC_00013617
Chr1	stalkie_big_nohaplotig	exon	167163057	167163633	98	-	.	Parent=ORF2175.mrna2;Target=ORF2175 327 903 +
Chr1	stalkie_big_nohaplotig	exon	167163709	167163865	99	-	.	Parent=ORF2175.mrna2;Target=ORF2175 170 326 +
Chr1	stalkie_big_nohaplotig	exon	167163915	167164065	100	-	.	Parent=ORF2175.mrna2;Target=ORF2175 19 169 +
Chr1	stalkie_big_nohaplotig	exon	167164137	167164154	100	-	.	Parent=ORF2175.mrna2;Target=ORF2175 1 18 +
Chr1	stalkie_big_nohaplotig	CDS	167163057	167163633	.	-	1	Parent=ORF2175.mrna2;Target=ORF2175 327 903 +
Chr1	stalkie_big_nohaplotig	CDS	167163709	167163865	.	-	2	Parent=ORF2175.mrna2;Target=ORF2175 170 326 +
Chr1	stalkie_big_nohaplotig	CDS	167163915	167164065	.	-	0	Parent=ORF2175.mrna2;Target=ORF2175 19 169 +
Chr1	stalkie_big_nohaplotig	CDS	167164137	167164154	.	-	0	Parent=ORF2175.mrna2;Target=ORF2175 1 18 +
Chr1	gffcl	locus	167164919	167169396	.	+	.	ID=RLOC_00013618;geneIDs=FBgn0020616.1.path1;transcripts=FBgn0020616.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	167164919	167169396	.	+	.	ID=FBgn0020616.1.mrna1;geneID=FBgn0020616.1.path1;Name=FBgn0020616.1;Dir=sensecoverage=100.0;identity=99.3;matches=3377;mismatches=25;indels=0;unknowns=0;locus=RLOC_00013618
Chr1	stalkie_big_nohaplotig	exon	167164919	167165013	100	+	.	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 1 95 +
Chr1	stalkie_big_nohaplotig	exon	167165079	167165391	99	+	.	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 96 408 +
Chr1	stalkie_big_nohaplotig	exon	167165447	167165620	99	+	.	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 409 582 +
Chr1	stalkie_big_nohaplotig	exon	167165682	167165886	99	+	.	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 583 787 +
Chr1	stalkie_big_nohaplotig	exon	167165950	167166044	98	+	.	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 788 882 +
Chr1	stalkie_big_nohaplotig	exon	167166099	167166229	100	+	.	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 883 1013 +
Chr1	stalkie_big_nohaplotig	exon	167166289	167166591	99	+	.	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 1014 1316 +
Chr1	stalkie_big_nohaplotig	exon	167166647	167167482	99	+	.	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 1317 2152 +
Chr1	stalkie_big_nohaplotig	exon	167167546	167167904	98	+	.	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 2153 2511 +
Chr1	stalkie_big_nohaplotig	exon	167167972	167168131	99	+	.	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 2512 2671 +
Chr1	stalkie_big_nohaplotig	exon	167168195	167168325	97	+	.	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 2672 2802 +
Chr1	stalkie_big_nohaplotig	exon	167168731	167169271	99	+	.	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 2803 3343 +
Chr1	stalkie_big_nohaplotig	exon	167169338	167169396	100	+	.	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 3344 3402 +
Chr1	stalkie_big_nohaplotig	CDS	167164919	167165013	.	+	0	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 1 95 +
Chr1	stalkie_big_nohaplotig	CDS	167165079	167165391	.	+	1	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 96 408 +
Chr1	stalkie_big_nohaplotig	CDS	167165447	167165620	.	+	0	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 409 582 +
Chr1	stalkie_big_nohaplotig	CDS	167165682	167165886	.	+	0	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 583 787 +
Chr1	stalkie_big_nohaplotig	CDS	167165950	167166044	.	+	2	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 788 882 +
Chr1	stalkie_big_nohaplotig	CDS	167166099	167166229	.	+	0	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 883 1013 +
Chr1	stalkie_big_nohaplotig	CDS	167166289	167166591	.	+	1	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 1014 1316 +
Chr1	stalkie_big_nohaplotig	CDS	167166647	167167482	.	+	1	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 1317 2152 +
Chr1	stalkie_big_nohaplotig	CDS	167167546	167167904	.	+	2	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 2153 2511 +
Chr1	stalkie_big_nohaplotig	CDS	167167972	167168131	.	+	0	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 2512 2671 +
Chr1	stalkie_big_nohaplotig	CDS	167168195	167168325	.	+	2	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 2672 2802 +
Chr1	stalkie_big_nohaplotig	CDS	167168731	167169271	.	+	0	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 2803 3343 +
Chr1	stalkie_big_nohaplotig	CDS	167169338	167169396	.	+	2	Parent=FBgn0020616.1.mrna1;Target=FBgn0020616.1 3344 3402 +
Chr1	gffcl	locus	167187121	167188575	.	-	.	ID=RLOC_00013620;geneIDs=FBgn0017545.1.path1;transcripts=FBgn0017545.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	167187121	167188575	.	-	.	ID=FBgn0017545.1.mrna1;geneID=FBgn0017545.1.path1;Name=FBgn0017545.1;Dir=sensecoverage=100.0;identity=99.6;matches=804;mismatches=2;indels=1;unknowns=0;Target=FBgn0017545.1 3 71 +;locus=RLOC_00013620
Chr1	stalkie_big_nohaplotig	exon	167187121	167187583	100	-	.	Parent=FBgn0017545.1.mrna1;Target=FBgn0017545.1 345 807 +
Chr1	stalkie_big_nohaplotig	exon	167188233	167188575	99	-	.	Parent=FBgn0017545.1.mrna1;Target=FBgn0017545.1 1 344 +
Chr1	stalkie_big_nohaplotig	CDS	167188506	167188573	.	-	0	Parent=FBgn0017545.1.mrna1
Chr1	gffcl	locus	167194819	167196196	.	-	.	ID=RLOC_00013622;geneIDs=FBgn0031824.1.path1;transcripts=FBgn0031824.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	167194819	167196196	.	-	.	ID=FBgn0031824.1.mrna1;geneID=FBgn0031824.1.path1;Name=FBgn0031824.1;Dir=sensecoverage=100.0;identity=99.3;matches=1251;mismatches=9;indels=0;unknowns=0;locus=RLOC_00013622
Chr1	stalkie_big_nohaplotig	exon	167194819	167195609	98	-	.	Parent=FBgn0031824.1.mrna1;Target=FBgn0031824.1 470 1260 +
Chr1	stalkie_big_nohaplotig	exon	167195728	167196196	100	-	.	Parent=FBgn0031824.1.mrna1;Target=FBgn0031824.1 1 469 +
Chr1	stalkie_big_nohaplotig	CDS	167194819	167195609	.	-	2	Parent=FBgn0031824.1.mrna1;Target=FBgn0031824.1 470 1260 +
Chr1	stalkie_big_nohaplotig	CDS	167195728	167196196	.	-	0	Parent=FBgn0031824.1.mrna1;Target=FBgn0031824.1 1 469 +
Chr1	gffcl	locus	167209653	167210213	.	+	.	ID=RLOC_00013623;geneIDs=comp144799_c0_seq1.path1;transcripts=comp144799_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	167209653	167210213	.	+	.	ID=comp144799_c0_seq1.mrna1;geneID=comp144799_c0_seq1.path1;Name=comp144799_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=560;mismatches=0;indels=5;unknowns=0;Target=comp144799_c0_seq1 564 1 .;CDS_Target=comp144799_c0_seq1 168 1 .;locus=RLOC_00013623
Chr1	stalkie_big_nohaplotig	exon	167209653	167210213	99	+	.	Parent=comp144799_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	167209653	167209820	.	+	0	Parent=comp144799_c0_seq1.mrna1
Chr1	gffcl	locus	167226614	167252423	.	.	.	ID=RLOC_00013624;geneIDs=FBgn0083978.1.path1,comp653241_c0_seq1.path1;transcripts=FBgn0083978.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	167226614	167252060	.	-	.	ID=FBgn0083978.1.mrna1;geneID=FBgn0083978.1.path1;Name=FBgn0083978.1;Dir=sensecoverage=100.0;identity=99.2;matches=839;mismatches=7;indels=0;unknowns=0;locus=RLOC_00013624
Chr1	stalkie_big_nohaplotig	exon	167226614	167226794	97	-	.	Parent=FBgn0083978.1.mrna1;Target=FBgn0083978.1 666 846 +
Chr1	stalkie_big_nohaplotig	exon	167226916	167227093	99	-	.	Parent=FBgn0083978.1.mrna1;Target=FBgn0083978.1 488 665 +
Chr1	stalkie_big_nohaplotig	exon	167227186	167227343	98	-	.	Parent=FBgn0083978.1.mrna1;Target=FBgn0083978.1 330 487 +
Chr1	stalkie_big_nohaplotig	exon	167229638	167229819	100	-	.	Parent=FBgn0083978.1.mrna1;Target=FBgn0083978.1 148 329 +
Chr1	stalkie_big_nohaplotig	exon	167251914	167252060	100	-	.	Parent=FBgn0083978.1.mrna1;Target=FBgn0083978.1 1 147 +
Chr1	stalkie_big_nohaplotig	CDS	167226614	167226794	.	-	1	Parent=FBgn0083978.1.mrna1;Target=FBgn0083978.1 666 846 +
Chr1	stalkie_big_nohaplotig	CDS	167226916	167227093	.	-	2	Parent=FBgn0083978.1.mrna1;Target=FBgn0083978.1 488 665 +
Chr1	stalkie_big_nohaplotig	CDS	167227186	167227343	.	-	1	Parent=FBgn0083978.1.mrna1;Target=FBgn0083978.1 330 487 +
Chr1	stalkie_big_nohaplotig	CDS	167229638	167229819	.	-	0	Parent=FBgn0083978.1.mrna1;Target=FBgn0083978.1 148 329 +
Chr1	stalkie_big_nohaplotig	CDS	167251914	167252060	.	-	0	Parent=FBgn0083978.1.mrna1;Target=FBgn0083978.1 1 147 +
Chr1	gffcl	locus	167265003	167266289	.	-	.	ID=RLOC_00013625;geneIDs=comp162871_c1_seq1.path2;transcripts=comp162871_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	167265003	167266289	.	-	.	ID=comp162871_c1_seq1.mrna2;geneID=comp162871_c1_seq1.path2;Name=comp162871_c1_seq1;Dir=indeterminatecoverage=96.1;identity=93.7;matches=1254;mismatches=26;indels=59;unknowns=0;Target=comp162871_c1_seq1 1332 1 .;CDS_Target=comp162871_c1_seq1 825 724 .;locus=RLOC_00013625
Chr1	stalkie_big_nohaplotig	exon	167265003	167266289	93	-	.	Parent=comp162871_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	167265465	167265566	.	-	0	Parent=comp162871_c1_seq1.mrna2
Chr1	gffcl	locus	167274805	167275073	.	+	.	ID=RLOC_00013626;geneIDs=comp146671_c1_seq1.path2;transcripts=comp146671_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	167274805	167275073	.	+	.	ID=comp146671_c1_seq1.mrna2;geneID=comp146671_c1_seq1.path2;Name=comp146671_c1_seq1;Dir=indeterminatecoverage=99.3;identity=86.2;matches=232;mismatches=37;indels=0;unknowns=0;Target=comp146671_c1_seq1 269 1 .;CDS_Target=comp146671_c1_seq1 94 2 .;locus=RLOC_00013626
Chr1	stalkie_big_nohaplotig	exon	167274805	167275073	86	+	.	Parent=comp146671_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	167274806	167274898	.	+	0	Parent=comp146671_c1_seq1.mrna2
Chr1	gffcl	locus	167280160	167280514	.	-	.	ID=RLOC_00013627;geneIDs=comp153266_c0_seq1.path1;transcripts=comp153266_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	167280160	167280514	.	-	.	ID=comp153266_c0_seq1.mrna1;geneID=comp153266_c0_seq1.path1;Name=comp153266_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.0;matches=323;mismatches=32;indels=0;unknowns=0;Target=comp153266_c0_seq1 355 1 .;CDS_Target=comp153266_c0_seq1 355 2 .;locus=RLOC_00013627
Chr1	stalkie_big_nohaplotig	exon	167280160	167280514	90	-	.	Parent=comp153266_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	167280160	167280513	.	-	0	Parent=comp153266_c0_seq1.mrna1
Chr1	gffcl	locus	167284433	167284704	.	+	.	ID=RLOC_00013628;geneIDs=comp146671_c1_seq1.path1;transcripts=comp146671_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	167284433	167284704	.	+	.	ID=comp146671_c1_seq1.mrna1;geneID=comp146671_c1_seq1.path1;Name=comp146671_c1_seq1;Dir=indeterminatecoverage=100.0;identity=86.4;matches=235;mismatches=36;indels=1;unknowns=0;Target=comp146671_c1_seq1 271 1 .;CDS_Target=comp146671_c1_seq1 94 2 .;locus=RLOC_00013628
Chr1	stalkie_big_nohaplotig	exon	167284433	167284704	86	+	.	Parent=comp146671_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	167284434	167284527	.	+	0	Parent=comp146671_c1_seq1.mrna1
Chr1	gffcl	locus	167287530	167292137	.	+	.	ID=RLOC_00013629;geneIDs=comp161390_c0_seq1.path1;transcripts=comp161390_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	167287530	167292137	.	+	.	ID=comp161390_c0_seq1.mrna1;geneID=comp161390_c0_seq1.path1;Name=comp161390_c0_seq1;Dir=indeterminatecoverage=99.5;identity=95.9;matches=1914;mismatches=13;indels=69;unknowns=0;Target=comp161390_c0_seq1 1794 1645 .;locus=RLOC_00013629
Chr1	stalkie_big_nohaplotig	exon	167287530	167288247	99	+	.	Parent=comp161390_c0_seq1.mrna1;Target=comp161390_c0_seq1 730 11 .
Chr1	stalkie_big_nohaplotig	exon	167288318	167288397	98	+	.	Parent=comp161390_c0_seq1.mrna1;Target=comp161390_c0_seq1 810 731 .
Chr1	stalkie_big_nohaplotig	exon	167290462	167291172	95	+	.	Parent=comp161390_c0_seq1.mrna1;Target=comp161390_c0_seq1 1496 811 .
Chr1	stalkie_big_nohaplotig	exon	167291695	167292137	91	+	.	Parent=comp161390_c0_seq1.mrna1;Target=comp161390_c0_seq1 1981 1497 .
Chr1	stalkie_big_nohaplotig	CDS	167291843	167291950	.	+	0	Parent=comp161390_c0_seq1.mrna1
Chr1	gffcl	locus	167460031	167469806	.	-	.	ID=RLOC_00013633;geneIDs=comp161211_c5_seq1.path1;transcripts=comp161211_c5_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	167460031	167469806	.	-	.	ID=comp161211_c5_seq1.mrna1;geneID=comp161211_c5_seq1.path1;Name=comp161211_c5_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=4647;mismatches=51;indels=10;unknowns=0;Target=comp161211_c5_seq1 3164 2847 .;locus=RLOC_00013633
Chr1	stalkie_big_nohaplotig	exon	167460031	167460760	99	-	.	Parent=comp161211_c5_seq1.mrna1;Target=comp161211_c5_seq1 4709 3979 .
Chr1	stalkie_big_nohaplotig	exon	167460942	167463418	98	-	.	Parent=comp161211_c5_seq1.mrna1;Target=comp161211_c5_seq1 3978 1499 .
Chr1	stalkie_big_nohaplotig	exon	167468316	167469806	98	-	.	Parent=comp161211_c5_seq1.mrna1;Target=comp161211_c5_seq1 1498 2 .
Chr1	stalkie_big_nohaplotig	CDS	167461753	167462070	.	-	0	Parent=comp161211_c5_seq1.mrna1
Chr1	gffcl	locus	167635167	167637292	.	+	.	ID=RLOC_00013634;geneIDs=Dp_FBgn0243606.path2,comp163868_c0_seq1.path1;transcripts=comp163868_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	167635167	167637292	.	+	.	ID=comp163868_c0_seq1.mrna1;geneID=comp163868_c0_seq1.path1;Name=comp163868_c0_seq1;Dir=indeterminatecoverage=96.1;identity=97.9;matches=1987;mismatches=32;indels=10;unknowns=0;Target=comp163868_c0_seq1 2028 229 .;locus=RLOC_00013634
Chr1	stalkie_big_nohaplotig	exon	167635167	167635188	100	+	.	Parent=comp163868_c0_seq1.mrna1;Target=comp163868_c0_seq1 22 1 .
Chr1	stalkie_big_nohaplotig	exon	167635296	167637292	97	+	.	Parent=comp163868_c0_seq1.mrna1;Target=comp163868_c0_seq1 2029 23 .
Chr1	stalkie_big_nohaplotig	CDS	167635501	167637291	.	+	0	Parent=comp163868_c0_seq1.mrna1
Chr1	gffcl	locus	167657628	167658276	.	+	.	ID=RLOC_00013635;geneIDs=comp160064_c0_seq1.path3;transcripts=comp160064_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	167657628	167658276	.	+	.	ID=comp160064_c0_seq1.mrna3;geneID=comp160064_c0_seq1.path3;Name=comp160064_c0_seq1;Dir=indeterminatecoverage=93.3;identity=95.4;matches=629;mismatches=20;indels=10;unknowns=0;Target=comp160064_c0_seq1 706 48 .;CDS_Target=comp160064_c0_seq1 608 510 .;locus=RLOC_00013635
Chr1	stalkie_big_nohaplotig	exon	167657628	167658276	95	+	.	Parent=comp160064_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	167658090	167658178	.	+	0	Parent=comp160064_c0_seq1.mrna3
Chr1	gffcl	locus	167744831	167747676	.	-	.	ID=RLOC_00013636;geneIDs=FBgn0028479.1.path1;transcripts=FBgn0028479.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	167744831	167747676	.	-	.	ID=FBgn0028479.1.mrna1;geneID=FBgn0028479.1.path1;Name=FBgn0028479.1;Dir=sensecoverage=100.0;identity=99.9;matches=2335;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013636
Chr1	stalkie_big_nohaplotig	exon	167744831	167745316	99	-	.	Parent=FBgn0028479.1.mrna1;Target=FBgn0028479.1 1852 2337 +
Chr1	stalkie_big_nohaplotig	exon	167745379	167745514	100	-	.	Parent=FBgn0028479.1.mrna1;Target=FBgn0028479.1 1716 1851 +
Chr1	stalkie_big_nohaplotig	exon	167745562	167745643	100	-	.	Parent=FBgn0028479.1.mrna1;Target=FBgn0028479.1 1634 1715 +
Chr1	stalkie_big_nohaplotig	exon	167745697	167746384	100	-	.	Parent=FBgn0028479.1.mrna1;Target=FBgn0028479.1 946 1633 +
Chr1	stalkie_big_nohaplotig	exon	167746440	167746580	100	-	.	Parent=FBgn0028479.1.mrna1;Target=FBgn0028479.1 805 945 +
Chr1	stalkie_big_nohaplotig	exon	167746636	167747333	99	-	.	Parent=FBgn0028479.1.mrna1;Target=FBgn0028479.1 107 804 +
Chr1	stalkie_big_nohaplotig	exon	167747571	167747676	100	-	.	Parent=FBgn0028479.1.mrna1;Target=FBgn0028479.1 1 106 +
Chr1	stalkie_big_nohaplotig	CDS	167744831	167745316	.	-	0	Parent=FBgn0028479.1.mrna1;Target=FBgn0028479.1 1852 2337 +
Chr1	stalkie_big_nohaplotig	CDS	167745379	167745514	.	-	1	Parent=FBgn0028479.1.mrna1;Target=FBgn0028479.1 1716 1851 +
Chr1	stalkie_big_nohaplotig	CDS	167745562	167745643	.	-	2	Parent=FBgn0028479.1.mrna1;Target=FBgn0028479.1 1634 1715 +
Chr1	stalkie_big_nohaplotig	CDS	167745697	167746384	.	-	0	Parent=FBgn0028479.1.mrna1;Target=FBgn0028479.1 946 1633 +
Chr1	stalkie_big_nohaplotig	CDS	167746440	167746580	.	-	0	Parent=FBgn0028479.1.mrna1;Target=FBgn0028479.1 805 945 +
Chr1	stalkie_big_nohaplotig	CDS	167746636	167747333	.	-	2	Parent=FBgn0028479.1.mrna1;Target=FBgn0028479.1 107 804 +
Chr1	stalkie_big_nohaplotig	CDS	167747571	167747676	.	-	0	Parent=FBgn0028479.1.mrna1;Target=FBgn0028479.1 1 106 +
Chr1	gffcl	locus	167795176	167795523	.	+	.	ID=RLOC_00013637;geneIDs=comp152429_c1_seq1.path3;transcripts=comp152429_c1_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	167795176	167795523	.	+	.	ID=comp152429_c1_seq1.mrna3;geneID=comp152429_c1_seq1.path3;Name=comp152429_c1_seq1;Dir=indeterminatecoverage=100.0;identity=92.8;matches=323;mismatches=25;indels=0;unknowns=0;Target=comp152429_c1_seq1 348 1 .;CDS_Target=comp152429_c1_seq1 348 307 .;locus=RLOC_00013637
Chr1	stalkie_big_nohaplotig	exon	167795176	167795523	92	+	.	Parent=comp152429_c1_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	167795482	167795523	.	+	0	Parent=comp152429_c1_seq1.mrna3
Chr1	gffcl	locus	167799182	167799543	.	+	.	ID=RLOC_00013638;geneIDs=comp151573_c1_seq1.path3;transcripts=comp151573_c1_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	167799182	167799543	.	+	.	ID=comp151573_c1_seq1.mrna3;geneID=comp151573_c1_seq1.path3;Name=comp151573_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=360;mismatches=2;indels=0;unknowns=0;Target=comp151573_c1_seq1 362 1 .;CDS_Target=comp151573_c1_seq1 120 1 .;locus=RLOC_00013638
Chr1	stalkie_big_nohaplotig	exon	167799182	167799543	99	+	.	Parent=comp151573_c1_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	167799182	167799301	.	+	0	Parent=comp151573_c1_seq1.mrna3
Chr1	gffcl	locus	167807253	167812417	.	-	.	ID=RLOC_00013639;geneIDs=comp150620_c0_seq1.path1;transcripts=comp150620_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	167807253	167812417	.	-	.	ID=comp150620_c0_seq1.mrna1;geneID=comp150620_c0_seq1.path1;Name=comp150620_c0_seq1;Dir=sensecoverage=99.6;identity=88.5;matches=216;mismatches=26;indels=2;unknowns=0;Target=comp150620_c0_seq1 3 62 +;locus=RLOC_00013639
Chr1	stalkie_big_nohaplotig	exon	167807253	167807284	93	-	.	Parent=comp150620_c0_seq1.mrna1;Target=comp150620_c0_seq1 212 243 +
Chr1	stalkie_big_nohaplotig	exon	167812206	167812417	87	-	.	Parent=comp150620_c0_seq1.mrna1;Target=comp150620_c0_seq1 2 211 +
Chr1	stalkie_big_nohaplotig	CDS	167812357	167812416	.	-	0	Parent=comp150620_c0_seq1.mrna1
Chr1	gffcl	locus	167875130	167878909	.	+	.	ID=RLOC_00013642;geneIDs=comp163689_c3_seq1.path1;transcripts=comp163689_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	167875130	167878909	.	+	.	ID=comp163689_c3_seq1.mrna1;geneID=comp163689_c3_seq1.path1;Name=comp163689_c3_seq1;Dir=indeterminatecoverage=88.5;identity=98.2;matches=3721;mismatches=58;indels=12;unknowns=0;Target=comp163689_c3_seq1 3790 1 .;CDS_Target=comp163689_c3_seq1 2855 2646 .;locus=RLOC_00013642
Chr1	stalkie_big_nohaplotig	exon	167875130	167878909	98	+	.	Parent=comp163689_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	167877766	167877974	.	+	0	Parent=comp163689_c3_seq1.mrna1
Chr1	gffcl	locus	167902339	167902989	.	-	.	ID=RLOC_00013643;geneIDs=FBgn0025378.8.path1;transcripts=FBgn0025378.8.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	167902339	167902989	.	-	.	ID=FBgn0025378.8.mrna1;geneID=FBgn0025378.8.path1;Name=FBgn0025378.8;Dir=sensecoverage=100.0;identity=99.5;matches=582;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013643
Chr1	stalkie_big_nohaplotig	exon	167902339	167902689	99	-	.	Parent=FBgn0025378.8.mrna1;Target=FBgn0025378.8 235 585 +
Chr1	stalkie_big_nohaplotig	exon	167902756	167902989	100	-	.	Parent=FBgn0025378.8.mrna1;Target=FBgn0025378.8 1 234 +
Chr1	stalkie_big_nohaplotig	CDS	167902339	167902689	.	-	0	Parent=FBgn0025378.8.mrna1;Target=FBgn0025378.8 235 585 +
Chr1	stalkie_big_nohaplotig	CDS	167902756	167902989	.	-	0	Parent=FBgn0025378.8.mrna1;Target=FBgn0025378.8 1 234 +
Chr1	gffcl	locus	167967234	167969738	.	-	.	ID=RLOC_00013644;geneIDs=comp154191_c4_seq1.path1;transcripts=comp154191_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	167967234	167969738	.	-	.	ID=comp154191_c4_seq1.mrna1;geneID=comp154191_c4_seq1.path1;Name=comp154191_c4_seq1;Dir=indeterminatecoverage=81.7;identity=97.8;matches=2456;mismatches=43;indels=11;unknowns=0;Target=comp154191_c4_seq1 800 726 .;locus=RLOC_00013644
Chr1	stalkie_big_nohaplotig	exon	167967234	167968935	97	-	.	Parent=comp154191_c4_seq1.mrna1;Target=comp154191_c4_seq1 2716 1007 .
Chr1	stalkie_big_nohaplotig	exon	167968942	167969738	97	-	.	Parent=comp154191_c4_seq1.mrna1;Target=comp154191_c4_seq1 800 1 .
Chr1	stalkie_big_nohaplotig	CDS	167968942	167969016	.	-	0	Parent=comp154191_c4_seq1.mrna1
Chr1	gffcl	locus	167970918	168033947	.	.	.	ID=RLOC_00013645;geneIDs=FBgn0030286.1.path1,comp150070_c0_seq1.path1;transcripts=FBgn0030286.1.mrna1,comp150070_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	167970918	168033947	.	+	.	ID=FBgn0030286.1.mrna1;geneID=FBgn0030286.1.path1;Name=FBgn0030286.1;Dir=sensecoverage=70.4;identity=98.6;matches=3722;mismatches=48;indels=6;unknowns=0;locus=RLOC_00013645
Chr1	stalkie_big_nohaplotig	exon	167970918	167970919	100	+	.	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 1589 1590 +
Chr1	stalkie_big_nohaplotig	exon	167977266	167977272	100	+	.	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 1591 1597 +
Chr1	stalkie_big_nohaplotig	exon	167982095	167982102	100	+	.	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 1598 1605 +
Chr1	stalkie_big_nohaplotig	exon	167989155	167989156	100	+	.	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 1606 1607 +
Chr1	stalkie_big_nohaplotig	exon	167990743	167990749	100	+	.	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 1608 1614 +
Chr1	stalkie_big_nohaplotig	exon	167993078	167993085	100	+	.	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 1615 1622 +
Chr1	stalkie_big_nohaplotig	exon	168000570	168000578	88	+	.	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 1623 1631 +
Chr1	stalkie_big_nohaplotig	exon	168008175	168008182	87	+	.	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 1632 1639 +
Chr1	stalkie_big_nohaplotig	exon	168020442	168020450	77	+	.	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 1640 1648 +
Chr1	stalkie_big_nohaplotig	exon	168029556	168032169	98	+	.	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 1649 4262 +
Chr1	stalkie_big_nohaplotig	exon	168032237	168032354	100	+	.	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 4263 4380 +
Chr1	stalkie_big_nohaplotig	exon	168032421	168032995	99	+	.	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 4381 4955 +
Chr1	stalkie_big_nohaplotig	exon	168033417	168033587	99	+	.	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 4956 5126 +
Chr1	stalkie_big_nohaplotig	exon	168033653	168033749	100	+	.	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 5127 5223 +
Chr1	stalkie_big_nohaplotig	exon	168033810	168033947	100	+	.	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 5224 5361 +
Chr1	stalkie_big_nohaplotig	CDS	167977266	167977272	.	+	0	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 1591 1597 +
Chr1	stalkie_big_nohaplotig	CDS	167982095	167982102	.	+	2	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 1598 1605 +
Chr1	stalkie_big_nohaplotig	CDS	167989155	167989156	.	+	0	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 1606 1607 +
Chr1	stalkie_big_nohaplotig	CDS	167990743	167990749	.	+	1	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 1608 1614 +
Chr1	stalkie_big_nohaplotig	CDS	167993078	167993085	.	+	0	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 1615 1622 +
Chr1	stalkie_big_nohaplotig	CDS	168000570	168000578	.	+	1	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 1623 1631 +
Chr1	stalkie_big_nohaplotig	CDS	168008175	168008182	.	+	1	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 1632 1639 +
Chr1	stalkie_big_nohaplotig	CDS	168020442	168020450	.	+	2	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 1640 1648 +
Chr1	stalkie_big_nohaplotig	CDS	168029556	168032169	.	+	2	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 1649 4262 +
Chr1	stalkie_big_nohaplotig	CDS	168032237	168032354	.	+	1	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 4263 4380 +
Chr1	stalkie_big_nohaplotig	CDS	168032421	168032995	.	+	0	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 4381 4955 +
Chr1	stalkie_big_nohaplotig	CDS	168033417	168033587	.	+	1	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 4956 5126 +
Chr1	stalkie_big_nohaplotig	CDS	168033653	168033749	.	+	1	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 5127 5223 +
Chr1	stalkie_big_nohaplotig	CDS	168033810	168033947	.	+	0	Parent=FBgn0030286.1.mrna1;Target=FBgn0030286.1 5224 5361 +
Chr1	stalkie_big_nohaplotig	mRNA	167990331	167991101	.	-	.	ID=comp150070_c0_seq1.mrna1;geneID=comp150070_c0_seq1.path1;Name=comp150070_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.5;matches=767;mismatches=4;indels=0;unknowns=0;Target=comp150070_c0_seq1 771 1 .;CDS_Target=comp150070_c0_seq1 374 231 .;locus=RLOC_00013645
Chr1	stalkie_big_nohaplotig	exon	167990331	167991101	99	-	.	Parent=comp150070_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	167990728	167990871	.	-	0	Parent=comp150070_c0_seq1.mrna1
Chr1	gffcl	locus	167979293	167981879	.	+	.	ID=RLOC_00013646;geneIDs=comp163111_c1_seq1.path1;transcripts=comp163111_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	167979293	167981879	.	+	.	ID=comp163111_c1_seq1.mrna1;geneID=comp163111_c1_seq1.path1;Name=comp163111_c1_seq1;Dir=indeterminatecoverage=99.2;identity=98.4;matches=2546;mismatches=41;indels=1;unknowns=0;Target=comp163111_c1_seq1 2590 3 .;CDS_Target=comp163111_c1_seq1 2588 963 .;locus=RLOC_00013646
Chr1	stalkie_big_nohaplotig	exon	167979293	167981879	98	+	.	Parent=comp163111_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	167980252	167981877	.	+	0	Parent=comp163111_c1_seq1.mrna1
Chr1	gffcl	locus	167995247	167996018	.	-	.	ID=RLOC_00013647;geneIDs=comp150070_c0_seq1.path2;transcripts=comp150070_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	167995247	167996018	.	-	.	ID=comp150070_c0_seq1.mrna2;geneID=comp150070_c0_seq1.path2;Name=comp150070_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.4;matches=767;mismatches=5;indels=0;unknowns=0;Target=comp150070_c0_seq1 772 1 .;CDS_Target=comp150070_c0_seq1 374 231 .;locus=RLOC_00013647
Chr1	stalkie_big_nohaplotig	exon	167995247	167996018	99	-	.	Parent=comp150070_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	167995645	167995788	.	-	0	Parent=comp150070_c0_seq1.mrna2
Chr1	gffcl	locus	168012367	168012825	.	-	.	ID=RLOC_00013648;geneIDs=FBgn0001491.1.path1;transcripts=FBgn0001491.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	168012367	168012825	.	-	.	ID=FBgn0001491.1.mrna1;geneID=FBgn0001491.1.path1;Name=FBgn0001491.1;Dir=indeterminatecoverage=100.0;identity=94.1;matches=432;mismatches=27;indels=0;unknowns=0;Target=FBgn0001491.1 459 1 .;locus=RLOC_00013648
Chr1	stalkie_big_nohaplotig	exon	168012367	168012825	94	-	.	Parent=FBgn0001491.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	168012367	168012825	.	-	0	Parent=FBgn0001491.1.mrna1
Chr1	gffcl	locus	168060653	168062008	.	+	.	ID=RLOC_00013649;geneIDs=comp160936_c1_seq1.path2;transcripts=comp160936_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	168060653	168062008	.	+	.	ID=comp160936_c1_seq1.mrna2;geneID=comp160936_c1_seq1.path2;Name=comp160936_c1_seq1;Dir=indeterminatecoverage=91.5;identity=99.2;matches=1345;mismatches=9;indels=2;unknowns=0;Target=comp160936_c1_seq1 1478 125 .;CDS_Target=comp160936_c1_seq1 1031 834 .;locus=RLOC_00013649
Chr1	stalkie_big_nohaplotig	exon	168060653	168062008	99	+	.	Parent=comp160936_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	168061364	168061561	.	+	0	Parent=comp160936_c1_seq1.mrna2
Chr1	gffcl	locus	168095188	168100203	.	-	.	ID=RLOC_00013650;geneIDs=comp160031_c0_seq1.path4;transcripts=comp160031_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	168095188	168100203	.	-	.	ID=comp160031_c0_seq1.mrna4;geneID=comp160031_c0_seq1.path4;Name=comp160031_c0_seq1;Dir=antisensecoverage=100.0;identity=90.8;matches=1578;mismatches=134;indels=26;unknowns=0;Target=comp160031_c0_seq1 729 737 .;locus=RLOC_00013650
Chr1	stalkie_big_nohaplotig	exon	168095188	168095589	91	-	.	Parent=comp160031_c0_seq1.mrna4;Target=comp160031_c0_seq1 1 394 -
Chr1	stalkie_big_nohaplotig	exon	168095772	168096311	88	-	.	Parent=comp160031_c0_seq1.mrna4;Target=comp160031_c0_seq1 417 940 -
Chr1	stalkie_big_nohaplotig	exon	168099341	168099996	93	-	.	Parent=comp160031_c0_seq1.mrna4;Target=comp160031_c0_seq1 941 1594 -
Chr1	stalkie_big_nohaplotig	exon	168100064	168100203	87	-	.	Parent=comp160031_c0_seq1.mrna4;Target=comp160031_c0_seq1 1642 1781 -
Chr1	stalkie_big_nohaplotig	CDS	168096098	168096106	.	-	0	Parent=comp160031_c0_seq1.mrna4
Chr1	gffcl	locus	168106573	168108203	.	+	.	ID=RLOC_00013651;geneIDs=ORF585.path6;transcripts=ORF585.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	168106573	168108203	.	+	.	ID=ORF585.mrna6;geneID=ORF585.path6;Name=ORF585;Dir=indeterminatecoverage=99.6;identity=99.3;matches=1620;mismatches=11;indels=0;unknowns=0;Target=ORF585 1631 1 .;CDS_Target=ORF585 1629 1 .;locus=RLOC_00013651
Chr1	stalkie_big_nohaplotig	exon	168106573	168108203	99	+	.	Parent=ORF585.mrna6
Chr1	stalkie_big_nohaplotig	CDS	168106573	168108201	.	+	0	Parent=ORF585.mrna6
Chr1	gffcl	locus	168183747	168183930	.	-	.	ID=RLOC_00013654;geneIDs=comp150030_c1_seq1.path2;transcripts=comp150030_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	168183747	168183930	.	-	.	ID=comp150030_c1_seq1.mrna2;geneID=comp150030_c1_seq1.path2;Name=comp150030_c1_seq1;Dir=indeterminatecoverage=60.5;identity=93.0;matches=174;mismatches=10;indels=3;unknowns=0;Target=comp150030_c1_seq1 187 1 .;CDS_Target=comp150030_c1_seq1 187 35 .;locus=RLOC_00013654
Chr1	stalkie_big_nohaplotig	exon	168183747	168183930	93	-	.	Parent=comp150030_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	168183747	168183896	.	-	0	Parent=comp150030_c1_seq1.mrna2
Chr1	gffcl	locus	168188331	168201728	.	+	.	ID=RLOC_00013655;geneIDs=ORF2586.path1;transcripts=ORF2586.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	168188331	168201728	.	+	.	ID=ORF2586.mrna1;geneID=ORF2586.path1;Name=ORF2586;Dir=sensecoverage=100.0;identity=100.0;matches=837;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013655
Chr1	stalkie_big_nohaplotig	exon	168188331	168188794	100	+	.	Parent=ORF2586.mrna1;Target=ORF2586 1 464 +
Chr1	stalkie_big_nohaplotig	exon	168201305	168201500	100	+	.	Parent=ORF2586.mrna1;Target=ORF2586 465 660 +
Chr1	stalkie_big_nohaplotig	exon	168201552	168201728	100	+	.	Parent=ORF2586.mrna1;Target=ORF2586 661 837 +
Chr1	stalkie_big_nohaplotig	CDS	168188331	168188794	.	+	0	Parent=ORF2586.mrna1;Target=ORF2586 1 464 +
Chr1	stalkie_big_nohaplotig	CDS	168201305	168201500	.	+	1	Parent=ORF2586.mrna1;Target=ORF2586 465 660 +
Chr1	stalkie_big_nohaplotig	CDS	168201552	168201728	.	+	0	Parent=ORF2586.mrna1;Target=ORF2586 661 837 +
Chr1	gffcl	locus	168315467	168315944	.	+	.	ID=RLOC_00013656;geneIDs=comp157122_c0_seq1.path8;transcripts=comp157122_c0_seq1.mrna8
Chr1	stalkie_big_nohaplotig	mRNA	168315467	168315944	.	+	.	ID=comp157122_c0_seq1.mrna8;geneID=comp157122_c0_seq1.path8;Name=comp157122_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=469;mismatches=9;indels=2;unknowns=0;Target=comp157122_c0_seq1 480 1 .;CDS_Target=comp157122_c0_seq1 480 244 .;locus=RLOC_00013656
Chr1	stalkie_big_nohaplotig	exon	168315467	168315944	97	+	.	Parent=comp157122_c0_seq1.mrna8
Chr1	stalkie_big_nohaplotig	CDS	168315708	168315944	.	+	0	Parent=comp157122_c0_seq1.mrna8
Chr1	gffcl	locus	168364630	170075637	.	+	.	ID=RLOC_00013658;geneIDs=comp162411_c2_seq1.path2;transcripts=comp162411_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	168364630	170075637	.	+	.	ID=comp162411_c2_seq1.mrna2;geneID=comp162411_c2_seq1.path2;Name=comp162411_c2_seq1;Dir=indeterminatecoverage=90.5;identity=98.6;matches=1777;mismatches=25;indels=0;unknowns=0;Target=comp162411_c2_seq1 465 319 .;locus=RLOC_00013658
Chr1	stalkie_big_nohaplotig	exon	168364630	168366391	98	+	.	Parent=comp162411_c2_seq1.mrna2;Target=comp162411_c2_seq1 1762 1 .
Chr1	stalkie_big_nohaplotig	exon	170014569	170014575	100	+	.	Parent=comp162411_c2_seq1.mrna2;Target=comp162411_c2_seq1 1769 1763 .
Chr1	stalkie_big_nohaplotig	exon	170022698	170022699	100	+	.	Parent=comp162411_c2_seq1.mrna2;Target=comp162411_c2_seq1 1771 1770 .
Chr1	stalkie_big_nohaplotig	exon	170046764	170046765	100	+	.	Parent=comp162411_c2_seq1.mrna2;Target=comp162411_c2_seq1 1773 1772 .
Chr1	stalkie_big_nohaplotig	exon	170056409	170056421	84	+	.	Parent=comp162411_c2_seq1.mrna2;Target=comp162411_c2_seq1 1786 1774 .
Chr1	stalkie_big_nohaplotig	exon	170059374	170059383	80	+	.	Parent=comp162411_c2_seq1.mrna2;Target=comp162411_c2_seq1 1796 1787 .
Chr1	stalkie_big_nohaplotig	exon	170075632	170075637	100	+	.	Parent=comp162411_c2_seq1.mrna2;Target=comp162411_c2_seq1 1802 1797 .
Chr1	stalkie_big_nohaplotig	CDS	168364948	168365094	.	+	0	Parent=comp162411_c2_seq1.mrna2
Chr1	gffcl	locus	168427653	168428363	.	+	.	ID=RLOC_00013659;geneIDs=Dp_FBgn0250603.path5;transcripts=Dp_FBgn0250603.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	168427653	168428363	.	+	.	ID=Dp_FBgn0250603.mrna5;geneID=Dp_FBgn0250603.path5;Name=Dp_FBgn0250603;Dir=indeterminatecoverage=100.0;identity=98.6;matches=701;mismatches=10;indels=0;unknowns=0;Target=Dp_FBgn0250603 711 1 .;locus=RLOC_00013659
Chr1	stalkie_big_nohaplotig	exon	168427653	168428363	98	+	.	Parent=Dp_FBgn0250603.mrna5
Chr1	stalkie_big_nohaplotig	CDS	168427653	168428363	.	+	0	Parent=Dp_FBgn0250603.mrna5
Chr1	gffcl	locus	168437455	168438123	.	+	.	ID=RLOC_00013660;geneIDs=FBgn0031781.1.path1;transcripts=FBgn0031781.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	168437455	168438123	.	+	.	ID=FBgn0031781.1.mrna1;geneID=FBgn0031781.1.path1;Name=FBgn0031781.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=664;mismatches=5;indels=0;unknowns=0;Target=FBgn0031781.1 669 1 .;locus=RLOC_00013660
Chr1	stalkie_big_nohaplotig	exon	168437455	168438123	99	+	.	Parent=FBgn0031781.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	168437455	168438123	.	+	0	Parent=FBgn0031781.1.mrna1
Chr1	gffcl	locus	168450886	168452145	.	-	.	ID=RLOC_00013661;geneIDs=ORF971.path2,comp160705_c3_seq1.path2;transcripts=ORF971.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	168450886	168452145	.	-	.	ID=ORF971.mrna2;geneID=ORF971.path2;Name=ORF971;Dir=indeterminatecoverage=96.3;identity=98.7;matches=1243;mismatches=17;indels=0;unknowns=0;Target=ORF971 1308 49 .;locus=RLOC_00013661
Chr1	stalkie_big_nohaplotig	exon	168450886	168452145	98	-	.	Parent=ORF971.mrna2
Chr1	stalkie_big_nohaplotig	CDS	168450886	168452145	.	-	0	Parent=ORF971.mrna2
Chr1	gffcl	locus	168507973	168508244	.	-	.	ID=RLOC_00013663;geneIDs=comp143316_c0_seq1.path1;transcripts=comp143316_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	168507973	168508244	.	-	.	ID=comp143316_c0_seq1.mrna1;geneID=comp143316_c0_seq1.path1;Name=comp143316_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=270;mismatches=2;indels=0;unknowns=0;Target=comp143316_c0_seq1 272 1 .;CDS_Target=comp143316_c0_seq1 95 3 .;locus=RLOC_00013663
Chr1	stalkie_big_nohaplotig	exon	168507973	168508244	99	-	.	Parent=comp143316_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	168508150	168508242	.	-	0	Parent=comp143316_c0_seq1.mrna1
Chr1	gffcl	locus	168508369	168508738	.	+	.	ID=RLOC_00013664;geneIDs=comp135497_c0_seq1.path1;transcripts=comp135497_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	168508369	168508738	.	+	.	ID=comp135497_c0_seq1.mrna1;geneID=comp135497_c0_seq1.path1;Name=comp135497_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=310;mismatches=1;indels=0;unknowns=0;Target=comp135497_c0_seq1 16 69 +;locus=RLOC_00013664
Chr1	stalkie_big_nohaplotig	exon	168508369	168508455	100	+	.	Parent=comp135497_c0_seq1.mrna1;Target=comp135497_c0_seq1 1 87 +
Chr1	stalkie_big_nohaplotig	exon	168508515	168508738	99	+	.	Parent=comp135497_c0_seq1.mrna1;Target=comp135497_c0_seq1 88 311 +
Chr1	stalkie_big_nohaplotig	CDS	168508384	168508437	.	+	0	Parent=comp135497_c0_seq1.mrna1
Chr1	gffcl	locus	168531909	168533756	.	-	.	ID=RLOC_00013665;geneIDs=FBgn0030456.1.path1;transcripts=FBgn0030456.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	168531909	168533756	.	-	.	ID=FBgn0030456.1.mrna1;geneID=FBgn0030456.1.path1;Name=FBgn0030456.1;Dir=sensecoverage=100.0;identity=99.8;matches=1661;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013665
Chr1	stalkie_big_nohaplotig	exon	168531909	168532670	99	-	.	Parent=FBgn0030456.1.mrna1;Target=FBgn0030456.1 904 1665 +
Chr1	stalkie_big_nohaplotig	exon	168532730	168533173	99	-	.	Parent=FBgn0030456.1.mrna1;Target=FBgn0030456.1 460 903 +
Chr1	stalkie_big_nohaplotig	exon	168533241	168533375	100	-	.	Parent=FBgn0030456.1.mrna1;Target=FBgn0030456.1 325 459 +
Chr1	stalkie_big_nohaplotig	exon	168533433	168533756	99	-	.	Parent=FBgn0030456.1.mrna1;Target=FBgn0030456.1 1 324 +
Chr1	stalkie_big_nohaplotig	CDS	168531909	168532670	.	-	0	Parent=FBgn0030456.1.mrna1;Target=FBgn0030456.1 904 1665 +
Chr1	stalkie_big_nohaplotig	CDS	168532730	168533173	.	-	0	Parent=FBgn0030456.1.mrna1;Target=FBgn0030456.1 460 903 +
Chr1	stalkie_big_nohaplotig	CDS	168533241	168533375	.	-	0	Parent=FBgn0030456.1.mrna1;Target=FBgn0030456.1 325 459 +
Chr1	stalkie_big_nohaplotig	CDS	168533433	168533756	.	-	0	Parent=FBgn0030456.1.mrna1;Target=FBgn0030456.1 1 324 +
Chr1	gffcl	locus	168737872	168837955	.	+	.	ID=RLOC_00013667;geneIDs=FBgn0010235.1.path1,comp146484_c0_seq1.path1;transcripts=comp146484_c0_seq1.mrna1,FBgn0010235.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	168737872	168738675	.	+	.	ID=comp146484_c0_seq1.mrna1;geneID=comp146484_c0_seq1.path1;Name=comp146484_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=369;mismatches=2;indels=0;unknowns=0;Target=comp146484_c0_seq1 191 301 .;locus=RLOC_00013667
Chr1	stalkie_big_nohaplotig	exon	168737872	168738175	100	+	.	Parent=comp146484_c0_seq1.mrna1;Target=comp146484_c0_seq1 68 371 -
Chr1	stalkie_big_nohaplotig	exon	168738609	168738675	97	+	.	Parent=comp146484_c0_seq1.mrna1;Target=comp146484_c0_seq1 1 67 -
Chr1	stalkie_big_nohaplotig	CDS	168737942	168738052	.	+	0	Parent=comp146484_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	168738453	168837955	.	+	.	ID=FBgn0010235.1.mrna1;geneID=FBgn0010235.1.path1;Name=FBgn0010235.1;Dir=indeterminatecoverage=62.4;identity=95.0;matches=837;mismatches=27;indels=17;unknowns=0;locus=RLOC_00013667
Chr1	stalkie_big_nohaplotig	exon	168738453	168738520	100	+	.	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 68 1 .
Chr1	stalkie_big_nohaplotig	exon	168738609	168739235	100	+	.	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 695 69 .
Chr1	stalkie_big_nohaplotig	exon	168740157	168740183	43	+	.	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 780 737 .
Chr1	stalkie_big_nohaplotig	exon	168741017	168741020	100	+	.	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 784 781 .
Chr1	stalkie_big_nohaplotig	exon	168743954	168743955	100	+	.	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 786 785 .
Chr1	stalkie_big_nohaplotig	exon	168744751	168744780	50	+	.	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 816 787 .
Chr1	stalkie_big_nohaplotig	exon	168752577	168752585	100	+	.	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 825 817 .
Chr1	stalkie_big_nohaplotig	exon	168759547	168759564	77	+	.	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 850 833 .
Chr1	stalkie_big_nohaplotig	exon	168759997	168760006	100	+	.	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 860 851 .
Chr1	stalkie_big_nohaplotig	exon	168765302	168765303	100	+	.	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 862 861 .
Chr1	stalkie_big_nohaplotig	exon	168773493	168773495	100	+	.	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 865 863 .
Chr1	stalkie_big_nohaplotig	exon	168780746	168780752	100	+	.	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 872 866 .
Chr1	stalkie_big_nohaplotig	exon	168790801	168790805	100	+	.	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 877 873 .
Chr1	stalkie_big_nohaplotig	exon	168797038	168797046	100	+	.	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 891 883 .
Chr1	stalkie_big_nohaplotig	exon	168804464	168804472	100	+	.	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 900 892 .
Chr1	stalkie_big_nohaplotig	exon	168807048	168807051	100	+	.	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 926 923 .
Chr1	stalkie_big_nohaplotig	exon	168825813	168825820	100	+	.	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 934 927 .
Chr1	stalkie_big_nohaplotig	exon	168829778	168829785	100	+	.	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 942 935 .
Chr1	stalkie_big_nohaplotig	exon	168837918	168837925	100	+	.	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 950 943 .
Chr1	stalkie_big_nohaplotig	exon	168837951	168837955	100	+	.	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 1007 1003 .
Chr1	stalkie_big_nohaplotig	CDS	168738453	168738520	.	+	0	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 68 1 .
Chr1	stalkie_big_nohaplotig	CDS	168738609	168739235	.	+	1	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 695 69 .
Chr1	stalkie_big_nohaplotig	CDS	168740157	168740183	.	+	1	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 780 737 .
Chr1	stalkie_big_nohaplotig	CDS	168741017	168741020	.	+	1	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 784 781 .
Chr1	stalkie_big_nohaplotig	CDS	168743954	168743955	.	+	0	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 786 785 .
Chr1	stalkie_big_nohaplotig	CDS	168744751	168744780	.	+	1	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 816 787 .
Chr1	stalkie_big_nohaplotig	CDS	168752577	168752585	.	+	1	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 825 817 .
Chr1	stalkie_big_nohaplotig	CDS	168759547	168759564	.	+	1	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 850 833 .
Chr1	stalkie_big_nohaplotig	CDS	168759997	168760006	.	+	1	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 860 851 .
Chr1	stalkie_big_nohaplotig	CDS	168765302	168765303	.	+	0	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 862 861 .
Chr1	stalkie_big_nohaplotig	CDS	168773493	168773495	.	+	1	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 865 863 .
Chr1	stalkie_big_nohaplotig	CDS	168780746	168780752	.	+	1	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 872 866 .
Chr1	stalkie_big_nohaplotig	CDS	168790801	168790805	.	+	0	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 877 873 .
Chr1	stalkie_big_nohaplotig	CDS	168797038	168797046	.	+	1	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 891 883 .
Chr1	stalkie_big_nohaplotig	CDS	168804464	168804472	.	+	1	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 900 892 .
Chr1	stalkie_big_nohaplotig	CDS	168807048	168807051	.	+	1	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 926 923 .
Chr1	stalkie_big_nohaplotig	CDS	168825813	168825820	.	+	0	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 934 927 .
Chr1	stalkie_big_nohaplotig	CDS	168829778	168829785	.	+	1	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 942 935 .
Chr1	stalkie_big_nohaplotig	CDS	168837918	168837925	.	+	2	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 950 943 .
Chr1	stalkie_big_nohaplotig	CDS	168837951	168837955	.	+	0	Parent=FBgn0010235.1.mrna1;Target=FBgn0010235.1 1007 1003 .
Chr1	gffcl	locus	168840840	168841928	.	+	.	ID=RLOC_00013669;geneIDs=comp163499_c0_seq1.path4;transcripts=comp163499_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	168840840	168841928	.	+	.	ID=comp163499_c0_seq1.mrna4;geneID=comp163499_c0_seq1.path4;Name=comp163499_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.2;matches=1059;mismatches=30;indels=0;unknowns=0;Target=comp163499_c0_seq1 1090 2 .;locus=RLOC_00013669
Chr1	stalkie_big_nohaplotig	exon	168840840	168841928	97	+	.	Parent=comp163499_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	168840840	168841928	.	+	0	Parent=comp163499_c0_seq1.mrna4
Chr1	gffcl	locus	168905394	168905792	.	-	.	ID=RLOC_00013670;geneIDs=comp145618_c0_seq1.path1;transcripts=comp145618_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	168905394	168905792	.	-	.	ID=comp145618_c0_seq1.mrna1;geneID=comp145618_c0_seq1.path1;Name=comp145618_c0_seq1;Dir=indeterminatecoverage=90.7;identity=87.5;matches=258;mismatches=25;indels=12;unknowns=0;Target=comp145618_c0_seq1 109 32 .;locus=RLOC_00013670
Chr1	stalkie_big_nohaplotig	exon	168905394	168905542	85	-	.	Parent=comp145618_c0_seq1.mrna1;Target=comp145618_c0_seq1 312 176 .
Chr1	stalkie_big_nohaplotig	exon	168905556	168905593	86	-	.	Parent=comp145618_c0_seq1.mrna1;Target=comp145618_c0_seq1 175 138 .
Chr1	stalkie_big_nohaplotig	exon	168905685	168905792	90	-	.	Parent=comp145618_c0_seq1.mrna1;Target=comp145618_c0_seq1 137 30 .
Chr1	stalkie_big_nohaplotig	CDS	168905713	168905790	.	-	0	Parent=comp145618_c0_seq1.mrna1
Chr1	gffcl	locus	168922511	168924358	.	+	.	ID=RLOC_00013671;geneIDs=FBgn0030456.1.path2;transcripts=FBgn0030456.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	168922511	168924358	.	+	.	ID=FBgn0030456.1.mrna2;geneID=FBgn0030456.1.path2;Name=FBgn0030456.1;Dir=sensecoverage=100.0;identity=99.8;matches=1661;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013671
Chr1	stalkie_big_nohaplotig	exon	168922511	168922834	99	+	.	Parent=FBgn0030456.1.mrna2;Target=FBgn0030456.1 1 324 +
Chr1	stalkie_big_nohaplotig	exon	168922892	168923026	100	+	.	Parent=FBgn0030456.1.mrna2;Target=FBgn0030456.1 325 459 +
Chr1	stalkie_big_nohaplotig	exon	168923094	168923537	99	+	.	Parent=FBgn0030456.1.mrna2;Target=FBgn0030456.1 460 903 +
Chr1	stalkie_big_nohaplotig	exon	168923597	168924358	99	+	.	Parent=FBgn0030456.1.mrna2;Target=FBgn0030456.1 904 1665 +
Chr1	stalkie_big_nohaplotig	CDS	168922511	168922834	.	+	0	Parent=FBgn0030456.1.mrna2;Target=FBgn0030456.1 1 324 +
Chr1	stalkie_big_nohaplotig	CDS	168922892	168923026	.	+	0	Parent=FBgn0030456.1.mrna2;Target=FBgn0030456.1 325 459 +
Chr1	stalkie_big_nohaplotig	CDS	168923094	168923537	.	+	0	Parent=FBgn0030456.1.mrna2;Target=FBgn0030456.1 460 903 +
Chr1	stalkie_big_nohaplotig	CDS	168923597	168924358	.	+	0	Parent=FBgn0030456.1.mrna2;Target=FBgn0030456.1 904 1665 +
Chr1	gffcl	locus	168926027	168927628	.	-	.	ID=RLOC_00013672;geneIDs=FBgn0052645.path1,comp163620_c3_seq1.path1;transcripts=FBgn0052645.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	168926066	168927628	.	-	.	ID=FBgn0052645.mrna1;geneID=FBgn0052645.path1;Name=FBgn0052645;Dir=sensecoverage=100.0;identity=99.9;matches=1387;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013672
Chr1	stalkie_big_nohaplotig	exon	168926066	168926191	100	-	.	Parent=FBgn0052645.mrna1;Target=FBgn0052645 1264 1389 +
Chr1	stalkie_big_nohaplotig	exon	168926257	168926880	100	-	.	Parent=FBgn0052645.mrna1;Target=FBgn0052645 640 1263 +
Chr1	stalkie_big_nohaplotig	exon	168926934	168927099	99	-	.	Parent=FBgn0052645.mrna1;Target=FBgn0052645 474 639 +
Chr1	stalkie_big_nohaplotig	exon	168927156	168927628	99	-	.	Parent=FBgn0052645.mrna1;Target=FBgn0052645 1 473 +
Chr1	stalkie_big_nohaplotig	CDS	168926066	168926191	.	-	0	Parent=FBgn0052645.mrna1;Target=FBgn0052645 1264 1389 +
Chr1	stalkie_big_nohaplotig	CDS	168926257	168926880	.	-	0	Parent=FBgn0052645.mrna1;Target=FBgn0052645 640 1263 +
Chr1	stalkie_big_nohaplotig	CDS	168926934	168927099	.	-	1	Parent=FBgn0052645.mrna1;Target=FBgn0052645 474 639 +
Chr1	stalkie_big_nohaplotig	CDS	168927156	168927628	.	-	0	Parent=FBgn0052645.mrna1;Target=FBgn0052645 1 473 +
Chr1	gffcl	locus	168946201	168946899	.	+	.	ID=RLOC_00013673;geneIDs=Dv_FBgn0209813.1.path6;transcripts=Dv_FBgn0209813.1.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	168946201	168946899	.	+	.	ID=Dv_FBgn0209813.1.mrna6;geneID=Dv_FBgn0209813.1.path6;Name=Dv_FBgn0209813.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=696;mismatches=3;indels=0;unknowns=0;Target=Dv_FBgn0209813.1 699 1 .;CDS_Target=Dv_FBgn0209813.1 699 283 .;locus=RLOC_00013673
Chr1	stalkie_big_nohaplotig	exon	168946201	168946899	99	+	.	Parent=Dv_FBgn0209813.1.mrna6
Chr1	stalkie_big_nohaplotig	CDS	168946483	168946899	.	+	0	Parent=Dv_FBgn0209813.1.mrna6
Chr1	gffcl	locus	168992611	168993420	.	+	.	ID=RLOC_00013674;geneIDs=FBgn0029629.1.path1;transcripts=FBgn0029629.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	168992611	168993420	.	+	.	ID=FBgn0029629.1.mrna1;geneID=FBgn0029629.1.path1;Name=FBgn0029629.1;Dir=indeterminatecoverage=99.6;identity=99.5;matches=806;mismatches=4;indels=0;unknowns=0;Target=FBgn0029629.1 813 4 .;locus=RLOC_00013674
Chr1	stalkie_big_nohaplotig	exon	168992611	168993420	99	+	.	Parent=FBgn0029629.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	168992611	168993420	.	+	0	Parent=FBgn0029629.1.mrna1
Chr1	gffcl	locus	169010647	169810432	.	+	.	ID=RLOC_00013676;geneIDs=FBgn0029943.1.path2;transcripts=FBgn0029943.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	169010647	169810432	.	+	.	ID=FBgn0029943.1.mrna2;geneID=FBgn0029943.1.path2;Name=FBgn0029943.1;Dir=sensecoverage=65.7;identity=99.8;matches=444;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013676
Chr1	stalkie_big_nohaplotig	exon	169010647	169010752	100	+	.	Parent=FBgn0029943.1.mrna2;Target=FBgn0029943.1 284 389 +
Chr1	stalkie_big_nohaplotig	exon	169010807	169011030	99	+	.	Parent=FBgn0029943.1.mrna2;Target=FBgn0029943.1 390 613 +
Chr1	stalkie_big_nohaplotig	exon	169797542	169797544	100	+	.	Parent=FBgn0029943.1.mrna2;Target=FBgn0029943.1 712 714 +
Chr1	stalkie_big_nohaplotig	exon	169804926	169804929	100	+	.	Parent=FBgn0029943.1.mrna2;Target=FBgn0029943.1 715 718 +
Chr1	stalkie_big_nohaplotig	exon	169810326	169810432	100	+	.	Parent=FBgn0029943.1.mrna2;Target=FBgn0029943.1 719 825 +
Chr1	stalkie_big_nohaplotig	CDS	169010647	169010752	.	+	1	Parent=FBgn0029943.1.mrna2;Target=FBgn0029943.1 284 389 +
Chr1	stalkie_big_nohaplotig	CDS	169010807	169011030	.	+	0	Parent=FBgn0029943.1.mrna2;Target=FBgn0029943.1 390 613 +
Chr1	stalkie_big_nohaplotig	CDS	169797542	169797544	.	+	1	Parent=FBgn0029943.1.mrna2;Target=FBgn0029943.1 712 714 +
Chr1	stalkie_big_nohaplotig	CDS	169804926	169804929	.	+	1	Parent=FBgn0029943.1.mrna2;Target=FBgn0029943.1 715 718 +
Chr1	stalkie_big_nohaplotig	CDS	169810326	169810432	.	+	0	Parent=FBgn0029943.1.mrna2;Target=FBgn0029943.1 719 825 +
Chr1	gffcl	locus	169010804	169810509	.	-	.	ID=RLOC_00013677;geneIDs=comp135844_c0_seq1.path1;transcripts=comp135844_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	169010804	169810509	.	-	.	ID=comp135844_c0_seq1.mrna1;geneID=comp135844_c0_seq1.path1;Name=comp135844_c0_seq1;Dir=indeterminatecoverage=47.9;identity=99.5;matches=424;mismatches=2;indels=0;unknowns=0;Target=comp135844_c0_seq1 185 69 .;locus=RLOC_00013677
Chr1	stalkie_big_nohaplotig	exon	169010804	169011033	99	-	.	Parent=comp135844_c0_seq1.mrna1;Target=comp135844_c0_seq1 517 288 .
Chr1	stalkie_big_nohaplotig	exon	169019692	169019699	100	-	.	Parent=comp135844_c0_seq1.mrna1;Target=comp135844_c0_seq1 279 272 .
Chr1	stalkie_big_nohaplotig	exon	169025074	169025075	100	-	.	Parent=comp135844_c0_seq1.mrna1;Target=comp135844_c0_seq1 264 263 .
Chr1	stalkie_big_nohaplotig	exon	169810326	169810509	100	-	.	Parent=comp135844_c0_seq1.mrna1;Target=comp135844_c0_seq1 185 2 .
Chr1	stalkie_big_nohaplotig	CDS	169810326	169810442	.	-	0	Parent=comp135844_c0_seq1.mrna1
Chr1	gffcl	locus	169194918	169195579	.	-	.	ID=RLOC_00013678;geneIDs=comp138192_c0_seq1.path1;transcripts=comp138192_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	169194918	169195579	.	-	.	ID=comp138192_c0_seq1.mrna1;geneID=comp138192_c0_seq1.path1;Name=comp138192_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=661;mismatches=1;indels=3;unknowns=0;Target=comp138192_c0_seq1 665 1 .;CDS_Target=comp138192_c0_seq1 393 190 .;locus=RLOC_00013678
Chr1	stalkie_big_nohaplotig	exon	169194918	169195579	99	-	.	Parent=comp138192_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	169195187	169195390	.	-	0	Parent=comp138192_c0_seq1.mrna1
Chr1	gffcl	locus	169221160	169221639	.	+	.	ID=RLOC_00013679;geneIDs=comp154833_c0_seq1.path2;transcripts=comp154833_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	169221160	169221639	.	+	.	ID=comp154833_c0_seq1.mrna2;geneID=comp154833_c0_seq1.path2;Name=comp154833_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.0;matches=456;mismatches=24;indels=0;unknowns=0;Target=comp154833_c0_seq1 480 1 .;CDS_Target=comp154833_c0_seq1 345 1 .;locus=RLOC_00013679
Chr1	stalkie_big_nohaplotig	exon	169221160	169221639	95	+	.	Parent=comp154833_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	169221160	169221504	.	+	0	Parent=comp154833_c0_seq1.mrna2
Chr1	gffcl	locus	169235446	169236463	.	-	.	ID=RLOC_00013680;geneIDs=comp162356_c1_seq1.path7;transcripts=comp162356_c1_seq1.mrna7
Chr1	stalkie_big_nohaplotig	mRNA	169235446	169236463	.	-	.	ID=comp162356_c1_seq1.mrna7;geneID=comp162356_c1_seq1.path7;Name=comp162356_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1014;mismatches=4;indels=0;unknowns=0;Target=comp162356_c1_seq1 1018 1 .;CDS_Target=comp162356_c1_seq1 1017 1 .;locus=RLOC_00013680
Chr1	stalkie_big_nohaplotig	exon	169235446	169236463	99	-	.	Parent=comp162356_c1_seq1.mrna7
Chr1	stalkie_big_nohaplotig	CDS	169235447	169236463	.	-	0	Parent=comp162356_c1_seq1.mrna7
Chr1	gffcl	locus	169443319	169444285	.	-	.	ID=RLOC_00013682;geneIDs=comp162746_c0_seq1.path5;transcripts=comp162746_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	169443319	169444285	.	-	.	ID=comp162746_c0_seq1.mrna5;geneID=comp162746_c0_seq1.path5;Name=comp162746_c0_seq1;Dir=indeterminatecoverage=89.0;identity=99.5;matches=962;mismatches=5;indels=0;unknowns=0;Target=comp162746_c0_seq1 1066 100 .;CDS_Target=comp162746_c0_seq1 961 521 .;locus=RLOC_00013682
Chr1	stalkie_big_nohaplotig	exon	169443319	169444285	99	-	.	Parent=comp162746_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	169443424	169443864	.	-	0	Parent=comp162746_c0_seq1.mrna5
Chr1	gffcl	locus	169552542	169554178	.	-	.	ID=RLOC_00013684;geneIDs=ORF585.path1;transcripts=ORF585.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	169552542	169554178	.	-	.	ID=ORF585.mrna1;geneID=ORF585.path1;Name=ORF585;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1628;mismatches=9;indels=1;unknowns=0;Target=ORF585 1638 1 .;locus=RLOC_00013684
Chr1	stalkie_big_nohaplotig	exon	169552542	169554178	99	-	.	Parent=ORF585.mrna1
Chr1	stalkie_big_nohaplotig	CDS	169552542	169554178	.	-	0	Parent=ORF585.mrna1
Chr1	gffcl	locus	169560846	169561975	.	-	.	ID=RLOC_00013685;geneIDs=comp163325_c0_seq1.path10;transcripts=comp163325_c0_seq1.mrna10
Chr1	stalkie_big_nohaplotig	mRNA	169560846	169561975	.	-	.	ID=comp163325_c0_seq1.mrna10;geneID=comp163325_c0_seq1.path10;Name=comp163325_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=1127;mismatches=3;indels=0;unknowns=0;Target=comp163325_c0_seq1 1133 4 .;CDS_Target=comp163325_c0_seq1 255 4 .;locus=RLOC_00013685
Chr1	stalkie_big_nohaplotig	exon	169560846	169561975	99	-	.	Parent=comp163325_c0_seq1.mrna10
Chr1	stalkie_big_nohaplotig	CDS	169561724	169561975	.	-	0	Parent=comp163325_c0_seq1.mrna10
Chr1	gffcl	locus	169605241	169723627	.	+	.	ID=RLOC_00013686;geneIDs=comp162952_c1_seq1.path1;transcripts=comp162952_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	169605241	169723627	.	+	.	ID=comp162952_c1_seq1.mrna1;geneID=comp162952_c1_seq1.path1;Name=comp162952_c1_seq1;Dir=indeterminatecoverage=83.9;identity=87.2;matches=826;mismatches=63;indels=58;unknowns=0;locus=RLOC_00013686
Chr1	stalkie_big_nohaplotig	exon	169605241	169605250	100	+	.	Parent=comp162952_c1_seq1.mrna1;Target=comp162952_c1_seq1 241 232 .
Chr1	stalkie_big_nohaplotig	exon	169616412	169616415	100	+	.	Parent=comp162952_c1_seq1.mrna1;Target=comp162952_c1_seq1 268 265 .
Chr1	stalkie_big_nohaplotig	exon	169617718	169617721	100	+	.	Parent=comp162952_c1_seq1.mrna1;Target=comp162952_c1_seq1 272 269 .
Chr1	stalkie_big_nohaplotig	exon	169618153	169618154	50	+	.	Parent=comp162952_c1_seq1.mrna1;Target=comp162952_c1_seq1 274 273 .
Chr1	stalkie_big_nohaplotig	exon	169618504	169618517	85	+	.	Parent=comp162952_c1_seq1.mrna1;Target=comp162952_c1_seq1 288 275 .
Chr1	stalkie_big_nohaplotig	exon	169633305	169633307	100	+	.	Parent=comp162952_c1_seq1.mrna1;Target=comp162952_c1_seq1 291 289 .
Chr1	stalkie_big_nohaplotig	exon	169646296	169646301	100	+	.	Parent=comp162952_c1_seq1.mrna1;Target=comp162952_c1_seq1 297 292 .
Chr1	stalkie_big_nohaplotig	exon	169646317	169646327	90	+	.	Parent=comp162952_c1_seq1.mrna1;Target=comp162952_c1_seq1 343 333 .
Chr1	stalkie_big_nohaplotig	exon	169654676	169654685	100	+	.	Parent=comp162952_c1_seq1.mrna1;Target=comp162952_c1_seq1 353 344 .
Chr1	stalkie_big_nohaplotig	exon	169664914	169664933	70	+	.	Parent=comp162952_c1_seq1.mrna1;Target=comp162952_c1_seq1 372 355 .
Chr1	stalkie_big_nohaplotig	exon	169672636	169672642	100	+	.	Parent=comp162952_c1_seq1.mrna1;Target=comp162952_c1_seq1 379 373 .
Chr1	stalkie_big_nohaplotig	exon	169675661	169675668	100	+	.	Parent=comp162952_c1_seq1.mrna1;Target=comp162952_c1_seq1 590 583 .
Chr1	stalkie_big_nohaplotig	exon	169691345	169691354	100	+	.	Parent=comp162952_c1_seq1.mrna1;Target=comp162952_c1_seq1 600 591 .
Chr1	stalkie_big_nohaplotig	exon	169691369	169691376	100	+	.	Parent=comp162952_c1_seq1.mrna1;Target=comp162952_c1_seq1 668 661 .
Chr1	stalkie_big_nohaplotig	exon	169704175	169704190	56	+	.	Parent=comp162952_c1_seq1.mrna1;Target=comp162952_c1_seq1 683 674 .
Chr1	stalkie_big_nohaplotig	exon	169709134	169709170	37	+	.	Parent=comp162952_c1_seq1.mrna1;Target=comp162952_c1_seq1 759 685 .
Chr1	stalkie_big_nohaplotig	exon	169710286	169710291	100	+	.	Parent=comp162952_c1_seq1.mrna1;Target=comp162952_c1_seq1 765 760 .
Chr1	stalkie_big_nohaplotig	exon	169717864	169717871	87	+	.	Parent=comp162952_c1_seq1.mrna1;Target=comp162952_c1_seq1 773 766 .
Chr1	stalkie_big_nohaplotig	exon	169722911	169723627	92	+	.	Parent=comp162952_c1_seq1.mrna1;Target=comp162952_c1_seq1 1490 774 .
Chr1	stalkie_big_nohaplotig	CDS	169717870	169717871	.	+	0	Parent=comp162952_c1_seq1.mrna1;Target=comp162952_c1_seq1 773 772 .
Chr1	stalkie_big_nohaplotig	CDS	169722911	169723394	.	+	1	Parent=comp162952_c1_seq1.mrna1;Target=comp162952_c1_seq1 1257 774 .
Chr1	gffcl	locus	169619005	169620769	.	+	.	ID=RLOC_00013687;geneIDs=comp159257_c1_seq1.path2;transcripts=comp159257_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	169619005	169620769	.	+	.	ID=comp159257_c1_seq1.mrna2;geneID=comp159257_c1_seq1.path2;Name=comp159257_c1_seq1;Dir=sensecoverage=100.0;identity=98.2;matches=1284;mismatches=14;indels=10;unknowns=0;locus=RLOC_00013687
Chr1	stalkie_big_nohaplotig	exon	169619005	169619628	99	+	.	Parent=comp159257_c1_seq1.mrna2;Target=comp159257_c1_seq1 1 625 +
Chr1	stalkie_big_nohaplotig	exon	169619765	169619818	100	+	.	Parent=comp159257_c1_seq1.mrna2;Target=comp159257_c1_seq1 626 679 +
Chr1	stalkie_big_nohaplotig	exon	169619908	169620156	99	+	.	Parent=comp159257_c1_seq1.mrna2;Target=comp159257_c1_seq1 680 928 +
Chr1	stalkie_big_nohaplotig	exon	169620220	169620247	100	+	.	Parent=comp159257_c1_seq1.mrna2;Target=comp159257_c1_seq1 929 956 +
Chr1	stalkie_big_nohaplotig	exon	169620318	169620391	88	+	.	Parent=comp159257_c1_seq1.mrna2;Target=comp159257_c1_seq1 957 1035 +
Chr1	stalkie_big_nohaplotig	exon	169620501	169620769	95	+	.	Parent=comp159257_c1_seq1.mrna2;Target=comp159257_c1_seq1 1036 1308 +
Chr1	stalkie_big_nohaplotig	CDS	169619626	169619628	.	+	0	Parent=comp159257_c1_seq1.mrna2;Target=comp159257_c1_seq1 623 625 +
Chr1	stalkie_big_nohaplotig	CDS	169619765	169619818	.	+	0	Parent=comp159257_c1_seq1.mrna2;Target=comp159257_c1_seq1 626 679 +
Chr1	stalkie_big_nohaplotig	CDS	169619908	169620156	.	+	0	Parent=comp159257_c1_seq1.mrna2;Target=comp159257_c1_seq1 680 928 +
Chr1	stalkie_big_nohaplotig	CDS	169620220	169620247	.	+	0	Parent=comp159257_c1_seq1.mrna2;Target=comp159257_c1_seq1 929 956 +
Chr1	stalkie_big_nohaplotig	CDS	169620318	169620377	.	+	2	Parent=comp159257_c1_seq1.mrna2;Target=comp159257_c1_seq1 957 1021 +
Chr1	gffcl	locus	169639379	169640081	.	+	.	ID=RLOC_00013688;geneIDs=Dv_FBgn0209813.1.path8;transcripts=Dv_FBgn0209813.1.mrna8
Chr1	stalkie_big_nohaplotig	mRNA	169639379	169640081	.	+	.	ID=Dv_FBgn0209813.1.mrna8;geneID=Dv_FBgn0209813.1.path8;Name=Dv_FBgn0209813.1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=697;mismatches=2;indels=4;unknowns=0;Target=Dv_FBgn0209813.1 699 1 .;locus=RLOC_00013688
Chr1	stalkie_big_nohaplotig	exon	169639379	169640081	99	+	.	Parent=Dv_FBgn0209813.1.mrna8
Chr1	stalkie_big_nohaplotig	CDS	169639379	169640081	.	+	0	Parent=Dv_FBgn0209813.1.mrna8
Chr1	gffcl	locus	169740648	169743090	.	+	.	ID=RLOC_00013689;geneIDs=comp163075_c0_seq1.path2;transcripts=comp163075_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	169740648	169743090	.	+	.	ID=comp163075_c0_seq1.mrna2;geneID=comp163075_c0_seq1.path2;Name=comp163075_c0_seq1;Dir=sensecoverage=100.0;identity=99.2;matches=2319;mismatches=16;indels=3;unknowns=0;locus=RLOC_00013689
Chr1	stalkie_big_nohaplotig	exon	169740648	169740929	99	+	.	Parent=comp163075_c0_seq1.mrna2;Target=comp163075_c0_seq1 1 282 +
Chr1	stalkie_big_nohaplotig	exon	169741038	169743090	99	+	.	Parent=comp163075_c0_seq1.mrna2;Target=comp163075_c0_seq1 283 2338 +
Chr1	stalkie_big_nohaplotig	CDS	169740648	169740929	.	+	0	Parent=comp163075_c0_seq1.mrna2;Target=comp163075_c0_seq1 1 282 +
Chr1	stalkie_big_nohaplotig	CDS	169741038	169743089	.	+	0	Parent=comp163075_c0_seq1.mrna2;Target=comp163075_c0_seq1 283 2337 +
Chr1	gffcl	locus	169773818	169774513	.	+	.	ID=RLOC_00013690;geneIDs=comp163159_c1_seq1.path3;transcripts=comp163159_c1_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	169773818	169774513	.	+	.	ID=comp163159_c1_seq1.mrna3;geneID=comp163159_c1_seq1.path3;Name=comp163159_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=680;mismatches=16;indels=0;unknowns=0;Target=comp163159_c1_seq1 696 1 .;locus=RLOC_00013690
Chr1	stalkie_big_nohaplotig	exon	169773818	169774513	97	+	.	Parent=comp163159_c1_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	169773818	169774513	.	+	0	Parent=comp163159_c1_seq1.mrna3
Chr1	gffcl	locus	169775617	169800538	.	+	.	ID=RLOC_00013691;geneIDs=comp58340_c0_seq1.path1;transcripts=comp58340_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	169775617	169800538	.	+	.	ID=comp58340_c0_seq1.mrna1;geneID=comp58340_c0_seq1.path1;Name=comp58340_c0_seq1;Dir=indeterminatecoverage=95.0;identity=92.5;matches=370;mismatches=23;indels=7;unknowns=0;Target=comp58340_c0_seq1 173 97 .;locus=RLOC_00013691
Chr1	stalkie_big_nohaplotig	exon	169775617	169775786	93	+	.	Parent=comp58340_c0_seq1.mrna1;Target=comp58340_c0_seq1 173 1 .
Chr1	stalkie_big_nohaplotig	exon	169800316	169800538	92	+	.	Parent=comp58340_c0_seq1.mrna1;Target=comp58340_c0_seq1 400 174 .
Chr1	stalkie_big_nohaplotig	CDS	169775713	169775786	.	+	0	Parent=comp58340_c0_seq1.mrna1
Chr1	gffcl	locus	169822786	169823346	.	-	.	ID=RLOC_00013693;geneIDs=FBgn0001229.1.path2;transcripts=FBgn0001229.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	169822786	169823346	.	-	.	ID=FBgn0001229.1.mrna2;geneID=FBgn0001229.1.path2;Name=FBgn0001229.1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=554;mismatches=7;indels=0;unknowns=0;Target=FBgn0001229.1 561 1 .;locus=RLOC_00013693
Chr1	stalkie_big_nohaplotig	exon	169822786	169823346	98	-	.	Parent=FBgn0001229.1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	169822786	169823346	.	-	0	Parent=FBgn0001229.1.mrna2
Chr1	gffcl	locus	170053288	170055983	.	+	.	ID=RLOC_00013695;geneIDs=FBgn0015575.3.path1;transcripts=FBgn0015575.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	170053288	170055983	.	+	.	ID=FBgn0015575.3.mrna1;geneID=FBgn0015575.3.path1;Name=FBgn0015575.3;Dir=sensecoverage=94.9;identity=99.1;matches=1699;mismatches=15;indels=0;unknowns=0;locus=RLOC_00013695
Chr1	stalkie_big_nohaplotig	exon	170053288	170053600	99	+	.	Parent=FBgn0015575.3.mrna1;Target=FBgn0015575.3 93 405 +
Chr1	stalkie_big_nohaplotig	exon	170053782	170053932	98	+	.	Parent=FBgn0015575.3.mrna1;Target=FBgn0015575.3 406 556 +
Chr1	stalkie_big_nohaplotig	exon	170054592	170055152	99	+	.	Parent=FBgn0015575.3.mrna1;Target=FBgn0015575.3 557 1117 +
Chr1	stalkie_big_nohaplotig	exon	170055218	170055387	100	+	.	Parent=FBgn0015575.3.mrna1;Target=FBgn0015575.3 1118 1287 +
Chr1	stalkie_big_nohaplotig	exon	170055465	170055983	98	+	.	Parent=FBgn0015575.3.mrna1;Target=FBgn0015575.3 1288 1806 +
Chr1	stalkie_big_nohaplotig	CDS	170053289	170053600	.	+	0	Parent=FBgn0015575.3.mrna1;Target=FBgn0015575.3 94 405 +
Chr1	stalkie_big_nohaplotig	CDS	170053782	170053932	.	+	0	Parent=FBgn0015575.3.mrna1;Target=FBgn0015575.3 406 556 +
Chr1	stalkie_big_nohaplotig	CDS	170054592	170055152	.	+	2	Parent=FBgn0015575.3.mrna1;Target=FBgn0015575.3 557 1117 +
Chr1	stalkie_big_nohaplotig	CDS	170055218	170055387	.	+	2	Parent=FBgn0015575.3.mrna1;Target=FBgn0015575.3 1118 1287 +
Chr1	stalkie_big_nohaplotig	CDS	170055465	170055983	.	+	0	Parent=FBgn0015575.3.mrna1;Target=FBgn0015575.3 1288 1806 +
Chr1	gffcl	locus	170134537	170134879	.	+	.	ID=RLOC_00013696;geneIDs=FBgn0261791.1.path2;transcripts=FBgn0261791.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	170134537	170134879	.	+	.	ID=FBgn0261791.1.mrna2;geneID=FBgn0261791.1.path2;Name=FBgn0261791.1;Dir=sensecoverage=100.0;identity=100.0;matches=234;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013696
Chr1	stalkie_big_nohaplotig	exon	170134537	170134574	100	+	.	Parent=FBgn0261791.1.mrna2;Target=FBgn0261791.1 1 38 +
Chr1	stalkie_big_nohaplotig	exon	170134628	170134775	100	+	.	Parent=FBgn0261791.1.mrna2;Target=FBgn0261791.1 39 186 +
Chr1	stalkie_big_nohaplotig	exon	170134832	170134879	100	+	.	Parent=FBgn0261791.1.mrna2;Target=FBgn0261791.1 187 234 +
Chr1	stalkie_big_nohaplotig	CDS	170134537	170134574	.	+	0	Parent=FBgn0261791.1.mrna2;Target=FBgn0261791.1 1 38 +
Chr1	stalkie_big_nohaplotig	CDS	170134628	170134775	.	+	1	Parent=FBgn0261791.1.mrna2;Target=FBgn0261791.1 39 186 +
Chr1	stalkie_big_nohaplotig	CDS	170134832	170134879	.	+	0	Parent=FBgn0261791.1.mrna2;Target=FBgn0261791.1 187 234 +
Chr1	gffcl	locus	170136045	170136575	.	-	.	ID=RLOC_00013697;geneIDs=comp149394_c2_seq1.path2;transcripts=comp149394_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	170136045	170136575	.	-	.	ID=comp149394_c2_seq1.mrna2;geneID=comp149394_c2_seq1.path2;Name=comp149394_c2_seq1;Dir=indeterminatecoverage=99.5;identity=96.1;matches=524;mismatches=7;indels=14;unknowns=0;Target=comp149394_c2_seq1 548 4 .;CDS_Target=comp149394_c2_seq1 360 253 .;locus=RLOC_00013697
Chr1	stalkie_big_nohaplotig	exon	170136045	170136575	96	-	.	Parent=comp149394_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	170136219	170136326	.	-	0	Parent=comp149394_c2_seq1.mrna2
Chr1	gffcl	locus	170152379	170153147	.	+	.	ID=RLOC_00013698;geneIDs=comp156591_c0_seq1.path1;transcripts=comp156591_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	170152379	170153147	.	+	.	ID=comp156591_c0_seq1.mrna1;geneID=comp156591_c0_seq1.path1;Name=comp156591_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=765;mismatches=4;indels=11;unknowns=0;Target=comp156591_c0_seq1 780 1 .;CDS_Target=comp156591_c0_seq1 105 1 .;locus=RLOC_00013698
Chr1	stalkie_big_nohaplotig	exon	170152379	170153147	98	+	.	Parent=comp156591_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	170152379	170152476	.	+	0	Parent=comp156591_c0_seq1.mrna1
Chr1	gffcl	locus	170154646	170155421	.	-	.	ID=RLOC_00013699;geneIDs=AAEL017220.2.path1;transcripts=AAEL017220.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	170154646	170155421	.	-	.	ID=AAEL017220.2.mrna1;geneID=AAEL017220.2.path1;Name=AAEL017220.2;Dir=sensecoverage=100.0;identity=100.0;matches=714;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013699
Chr1	stalkie_big_nohaplotig	exon	170154646	170154967	100	-	.	Parent=AAEL017220.2.mrna1;Target=AAEL017220.2 393 714 +
Chr1	stalkie_big_nohaplotig	exon	170155030	170155421	100	-	.	Parent=AAEL017220.2.mrna1;Target=AAEL017220.2 1 392 +
Chr1	stalkie_big_nohaplotig	CDS	170154646	170154967	.	-	1	Parent=AAEL017220.2.mrna1;Target=AAEL017220.2 393 714 +
Chr1	stalkie_big_nohaplotig	CDS	170155030	170155421	.	-	0	Parent=AAEL017220.2.mrna1;Target=AAEL017220.2 1 392 +
Chr1	gffcl	locus	170276411	170276621	.	-	.	ID=RLOC_00013702;geneIDs=comp150287_c0_seq1.path9;transcripts=comp150287_c0_seq1.mrna9
Chr1	stalkie_big_nohaplotig	mRNA	170276411	170276621	.	-	.	ID=comp150287_c0_seq1.mrna9;geneID=comp150287_c0_seq1.path9;Name=comp150287_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=204;mismatches=7;indels=0;unknowns=0;Target=comp150287_c0_seq1 211 1 .;CDS_Target=comp150287_c0_seq1 211 2 .;locus=RLOC_00013702
Chr1	stalkie_big_nohaplotig	exon	170276411	170276621	96	-	.	Parent=comp150287_c0_seq1.mrna9
Chr1	stalkie_big_nohaplotig	CDS	170276411	170276620	.	-	0	Parent=comp150287_c0_seq1.mrna9
Chr1	gffcl	locus	170399771	170415475	.	-	.	ID=RLOC_00013704;geneIDs=comp157739_c3_seq1.path7;transcripts=comp157739_c3_seq1.mrna7
Chr1	stalkie_big_nohaplotig	mRNA	170399771	170415475	.	-	.	ID=comp157739_c3_seq1.mrna7;geneID=comp157739_c3_seq1.path7;Name=comp157739_c3_seq1;Dir=sensecoverage=100.0;identity=97.2;matches=1440;mismatches=11;indels=31;unknowns=0;locus=RLOC_00013704
Chr1	stalkie_big_nohaplotig	exon	170399771	170400362	94	-	.	Parent=comp157739_c3_seq1.mrna7;Target=comp157739_c3_seq1 887 1456 +
Chr1	stalkie_big_nohaplotig	exon	170414591	170415475	99	-	.	Parent=comp157739_c3_seq1.mrna7;Target=comp157739_c3_seq1 1 886 +
Chr1	stalkie_big_nohaplotig	CDS	170400218	170400362	.	-	1	Parent=comp157739_c3_seq1.mrna7;Target=comp157739_c3_seq1 887 1025 +
Chr1	stalkie_big_nohaplotig	CDS	170414591	170414625	.	-	0	Parent=comp157739_c3_seq1.mrna7;Target=comp157739_c3_seq1 852 886 +
Chr1	gffcl	locus	170416272	170417492	.	-	.	ID=RLOC_00013705;geneIDs=comp161809_c0_seq1.path5;transcripts=comp161809_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	170416272	170417492	.	-	.	ID=comp161809_c0_seq1.mrna5;geneID=comp161809_c0_seq1.path5;Name=comp161809_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1217;mismatches=4;indels=0;unknowns=0;Target=comp161809_c0_seq1 1221 1 .;CDS_Target=comp161809_c0_seq1 941 759 .;locus=RLOC_00013705
Chr1	stalkie_big_nohaplotig	exon	170416272	170417492	99	-	.	Parent=comp161809_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	170416552	170416734	.	-	0	Parent=comp161809_c0_seq1.mrna5
Chr1	gffcl	locus	170420367	170420813	.	+	.	ID=RLOC_00013707;geneIDs=Dp_FBgn0245412.2.path1;transcripts=Dp_FBgn0245412.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	170420367	170420813	.	+	.	ID=Dp_FBgn0245412.2.mrna1;geneID=Dp_FBgn0245412.2.path1;Name=Dp_FBgn0245412.2;Dir=indeterminatecoverage=100.0;identity=99.3;matches=444;mismatches=3;indels=0;unknowns=0;Target=Dp_FBgn0245412.2 447 1 .;locus=RLOC_00013707
Chr1	stalkie_big_nohaplotig	exon	170420367	170420813	99	+	.	Parent=Dp_FBgn0245412.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	170420367	170420813	.	+	0	Parent=Dp_FBgn0245412.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	170427932	170526900	.	+	.	ID=comp158780_c0_seq1.mrna1;geneID=comp158780_c0_seq1.path1;Name=comp158780_c0_seq1;Dir=indeterminatecoverage=95.2;identity=84.6;matches=683;mismatches=81;indels=43;unknowns=0;locus=RLOC_00013708
Chr1	stalkie_big_nohaplotig	exon	170427932	170428009	94	+	.	Parent=comp158780_c0_seq1.mrna1;Target=comp158780_c0_seq1 125 48 .
Chr1	stalkie_big_nohaplotig	exon	170428215	170428354	71	+	.	Parent=comp158780_c0_seq1.mrna1;Target=comp158780_c0_seq1 274 156 .
Chr1	stalkie_big_nohaplotig	exon	170428356	170428597	79	+	.	Parent=comp158780_c0_seq1.mrna1;Target=comp158780_c0_seq1 509 285 .
Chr1	stalkie_big_nohaplotig	exon	170470690	170470697	100	+	.	Parent=comp158780_c0_seq1.mrna1;Target=comp158780_c0_seq1 583 576 .
Chr1	stalkie_big_nohaplotig	exon	170476374	170476383	100	+	.	Parent=comp158780_c0_seq1.mrna1;Target=comp158780_c0_seq1 599 590 .
Chr1	stalkie_big_nohaplotig	exon	170485358	170485363	100	+	.	Parent=comp158780_c0_seq1.mrna1;Target=comp158780_c0_seq1 609 604 .
Chr1	stalkie_big_nohaplotig	exon	170489242	170489250	100	+	.	Parent=comp158780_c0_seq1.mrna1;Target=comp158780_c0_seq1 618 610 .
Chr1	stalkie_big_nohaplotig	exon	170516866	170516874	100	+	.	Parent=comp158780_c0_seq1.mrna1;Target=comp158780_c0_seq1 635 627 .
Chr1	stalkie_big_nohaplotig	exon	170520711	170520719	100	+	.	Parent=comp158780_c0_seq1.mrna1;Target=comp158780_c0_seq1 644 636 .
Chr1	stalkie_big_nohaplotig	exon	170520845	170520851	100	+	.	Parent=comp158780_c0_seq1.mrna1;Target=comp158780_c0_seq1 651 645 .
Chr1	stalkie_big_nohaplotig	exon	170524579	170524582	100	+	.	Parent=comp158780_c0_seq1.mrna1;Target=comp158780_c0_seq1 655 652 .
Chr1	stalkie_big_nohaplotig	exon	170524731	170524734	100	+	.	Parent=comp158780_c0_seq1.mrna1;Target=comp158780_c0_seq1 659 656 .
Chr1	stalkie_big_nohaplotig	exon	170525915	170526035	85	+	.	Parent=comp158780_c0_seq1.mrna1;Target=comp158780_c0_seq1 779 660 .
Chr1	stalkie_big_nohaplotig	exon	170526252	170526321	90	+	.	Parent=comp158780_c0_seq1.mrna1;Target=comp158780_c0_seq1 886 817 .
Chr1	stalkie_big_nohaplotig	exon	170526815	170526900	94	+	.	Parent=comp158780_c0_seq1.mrna1;Target=comp158780_c0_seq1 972 887 .
Chr1	stalkie_big_nohaplotig	CDS	170525948	170526035	.	+	0	Parent=comp158780_c0_seq1.mrna1;Target=comp158780_c0_seq1 779 692 .
Chr1	stalkie_big_nohaplotig	CDS	170526252	170526255	.	+	2	Parent=comp158780_c0_seq1.mrna1;Target=comp158780_c0_seq1 820 817 .
Chr1	gffcl	locus	170483704	170499987	.	-	.	ID=RLOC_00013709;geneIDs=FBgn0004366.1.path1;transcripts=FBgn0004366.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	170483704	170499987	.	-	.	ID=FBgn0004366.1.mrna1;geneID=FBgn0004366.1.path1;Name=FBgn0004366.1;Dir=sensecoverage=54.4;identity=100.0;matches=1109;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013709
Chr1	stalkie_big_nohaplotig	exon	170483704	170483798	100	-	.	Parent=FBgn0004366.1.mrna1;Target=FBgn0004366.1 1943 2037 +
Chr1	stalkie_big_nohaplotig	exon	170483866	170484081	100	-	.	Parent=FBgn0004366.1.mrna1;Target=FBgn0004366.1 1727 1942 +
Chr1	stalkie_big_nohaplotig	exon	170484149	170484248	100	-	.	Parent=FBgn0004366.1.mrna1;Target=FBgn0004366.1 1627 1726 +
Chr1	stalkie_big_nohaplotig	exon	170484313	170484476	100	-	.	Parent=FBgn0004366.1.mrna1;Target=FBgn0004366.1 1463 1626 +
Chr1	stalkie_big_nohaplotig	exon	170484570	170484822	100	-	.	Parent=FBgn0004366.1.mrna1;Target=FBgn0004366.1 1210 1462 +
Chr1	stalkie_big_nohaplotig	exon	170484900	170485085	100	-	.	Parent=FBgn0004366.1.mrna1;Target=FBgn0004366.1 1024 1209 +
Chr1	stalkie_big_nohaplotig	exon	170494420	170494505	100	-	.	Parent=FBgn0004366.1.mrna1;Target=FBgn0004366.1 938 1023 +
Chr1	stalkie_big_nohaplotig	exon	170495813	170495815	100	-	.	Parent=FBgn0004366.1.mrna1;Target=FBgn0004366.1 935 937 +
Chr1	stalkie_big_nohaplotig	exon	170499982	170499987	100	-	.	Parent=FBgn0004366.1.mrna1;Target=FBgn0004366.1 929 934 +
Chr1	stalkie_big_nohaplotig	CDS	170483704	170483798	.	-	2	Parent=FBgn0004366.1.mrna1;Target=FBgn0004366.1 1943 2037 +
Chr1	stalkie_big_nohaplotig	CDS	170483866	170484081	.	-	2	Parent=FBgn0004366.1.mrna1;Target=FBgn0004366.1 1727 1942 +
Chr1	stalkie_big_nohaplotig	CDS	170484149	170484248	.	-	0	Parent=FBgn0004366.1.mrna1;Target=FBgn0004366.1 1627 1726 +
Chr1	stalkie_big_nohaplotig	CDS	170484313	170484476	.	-	2	Parent=FBgn0004366.1.mrna1;Target=FBgn0004366.1 1463 1626 +
Chr1	stalkie_big_nohaplotig	CDS	170484570	170484822	.	-	0	Parent=FBgn0004366.1.mrna1;Target=FBgn0004366.1 1210 1462 +
Chr1	stalkie_big_nohaplotig	CDS	170484900	170485085	.	-	0	Parent=FBgn0004366.1.mrna1;Target=FBgn0004366.1 1024 1209 +
Chr1	stalkie_big_nohaplotig	CDS	170494420	170494505	.	-	2	Parent=FBgn0004366.1.mrna1;Target=FBgn0004366.1 938 1023 +
Chr1	stalkie_big_nohaplotig	CDS	170495813	170495815	.	-	2	Parent=FBgn0004366.1.mrna1;Target=FBgn0004366.1 935 937 +
Chr1	stalkie_big_nohaplotig	CDS	170499982	170499985	.	-	0	Parent=FBgn0004366.1.mrna1;Target=FBgn0004366.1 931 934 +
Chr1	gffcl	locus	170494580	170495680	.	-	.	ID=RLOC_00013710;geneIDs=comp147533_c0_seq1.path1;transcripts=comp147533_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	170494580	170495680	.	-	.	ID=comp147533_c0_seq1.mrna1;geneID=comp147533_c0_seq1.path1;Name=comp147533_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.9;matches=1101;mismatches=0;indels=1;unknowns=0;Target=comp147533_c0_seq1 1102 1 .;CDS_Target=comp147533_c0_seq1 236 78 .;locus=RLOC_00013710
Chr1	stalkie_big_nohaplotig	exon	170494580	170495680	99	-	.	Parent=comp147533_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	170495445	170495603	.	-	0	Parent=comp147533_c0_seq1.mrna1
Chr1	gffcl	locus	170552254	170552683	.	+	.	ID=RLOC_00013712;geneIDs=FBgn0030272.1.path2;transcripts=FBgn0030272.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	170552254	170552683	.	+	.	ID=FBgn0030272.1.mrna2;geneID=FBgn0030272.1.path2;Name=FBgn0030272.1;Dir=sensecoverage=100.0;identity=100.0;matches=309;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013712
Chr1	stalkie_big_nohaplotig	exon	170552254	170552323	100	+	.	Parent=FBgn0030272.1.mrna2;Target=FBgn0030272.1 1 70 +
Chr1	stalkie_big_nohaplotig	exon	170552383	170552545	100	+	.	Parent=FBgn0030272.1.mrna2;Target=FBgn0030272.1 71 233 +
Chr1	stalkie_big_nohaplotig	exon	170552608	170552683	100	+	.	Parent=FBgn0030272.1.mrna2;Target=FBgn0030272.1 234 309 +
Chr1	stalkie_big_nohaplotig	CDS	170552254	170552323	.	+	0	Parent=FBgn0030272.1.mrna2;Target=FBgn0030272.1 1 70 +
Chr1	stalkie_big_nohaplotig	CDS	170552383	170552545	.	+	2	Parent=FBgn0030272.1.mrna2;Target=FBgn0030272.1 71 233 +
Chr1	stalkie_big_nohaplotig	CDS	170552608	170552683	.	+	1	Parent=FBgn0030272.1.mrna2;Target=FBgn0030272.1 234 309 +
Chr1	gffcl	locus	170607033	170608259	.	+	.	ID=RLOC_00013713;geneIDs=Dp_FBgn0249247.4.path1;transcripts=Dp_FBgn0249247.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	170607033	170608259	.	+	.	ID=Dp_FBgn0249247.4.mrna1;geneID=Dp_FBgn0249247.4.path1;Name=Dp_FBgn0249247.4;Dir=indeterminatecoverage=100.0;identity=97.3;matches=1203;mismatches=24;indels=9;unknowns=0;Target=Dp_FBgn0249247.4 1236 1 .;locus=RLOC_00013713
Chr1	stalkie_big_nohaplotig	exon	170607033	170608259	97	+	.	Parent=Dp_FBgn0249247.4.mrna1
Chr1	stalkie_big_nohaplotig	CDS	170607033	170608259	.	+	0	Parent=Dp_FBgn0249247.4.mrna1
Chr1	gffcl	locus	170703434	170705417	.	+	.	ID=RLOC_00013714;geneIDs=comp160031_c0_seq1.path1;transcripts=comp160031_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	170703434	170705417	.	+	.	ID=comp160031_c0_seq1.mrna1;geneID=comp160031_c0_seq1.path1;Name=comp160031_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.8;matches=1577;mismatches=134;indels=25;unknowns=0;Target=comp160031_c0_seq1 1388 1032 .;locus=RLOC_00013714
Chr1	stalkie_big_nohaplotig	exon	170703434	170703835	90	+	.	Parent=comp160031_c0_seq1.mrna1;Target=comp160031_c0_seq1 394 1 .
Chr1	stalkie_big_nohaplotig	exon	170704018	170705210	91	+	.	Parent=comp160031_c0_seq1.mrna1;Target=comp160031_c0_seq1 1594 417 .
Chr1	stalkie_big_nohaplotig	exon	170705278	170705417	87	+	.	Parent=comp160031_c0_seq1.mrna1;Target=comp160031_c0_seq1 1781 1642 .
Chr1	stalkie_big_nohaplotig	CDS	170704646	170705003	.	+	0	Parent=comp160031_c0_seq1.mrna1
Chr1	gffcl	locus	170707368	170709352	.	-	.	ID=RLOC_00013715;geneIDs=comp160031_c0_seq1.path2;transcripts=comp160031_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	170707368	170709352	.	-	.	ID=comp160031_c0_seq1.mrna2;geneID=comp160031_c0_seq1.path2;Name=comp160031_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.8;matches=1576;mismatches=136;indels=24;unknowns=0;Target=comp160031_c0_seq1 670 494 .;locus=RLOC_00013715
Chr1	stalkie_big_nohaplotig	exon	170707368	170707507	87	-	.	Parent=comp160031_c0_seq1.mrna2;Target=comp160031_c0_seq1 1781 1642 .
Chr1	stalkie_big_nohaplotig	exon	170707575	170708768	91	-	.	Parent=comp160031_c0_seq1.mrna2;Target=comp160031_c0_seq1 1594 417 .
Chr1	stalkie_big_nohaplotig	exon	170708951	170709352	90	-	.	Parent=comp160031_c0_seq1.mrna2;Target=comp160031_c0_seq1 394 1 .
Chr1	stalkie_big_nohaplotig	CDS	170708501	170708691	.	-	0	Parent=comp160031_c0_seq1.mrna2
Chr1	gffcl	locus	170740222	170740367	.	-	.	ID=RLOC_00013716;geneIDs=comp135128_c0_seq1.path9;transcripts=comp135128_c0_seq1.mrna9
Chr1	stalkie_big_nohaplotig	mRNA	170740222	170740367	.	-	.	ID=comp135128_c0_seq1.mrna9;geneID=comp135128_c0_seq1.path9;Name=comp135128_c0_seq1;Dir=indeterminatecoverage=46.9;identity=84.2;matches=123;mismatches=23;indels=0;unknowns=0;Target=comp135128_c0_seq1 309 164 .;CDS_Target=comp135128_c0_seq1 215 165 .;locus=RLOC_00013716
Chr1	stalkie_big_nohaplotig	exon	170740222	170740367	84	-	.	Parent=comp135128_c0_seq1.mrna9
Chr1	stalkie_big_nohaplotig	CDS	170740316	170740366	.	-	0	Parent=comp135128_c0_seq1.mrna9
Chr1	gffcl	locus	170790862	170791248	.	-	.	ID=RLOC_00013717;geneIDs=FBgn0053817.2.path1;transcripts=FBgn0053817.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	170790862	170791248	.	-	.	ID=FBgn0053817.2.mrna1;geneID=FBgn0053817.2.path1;Name=FBgn0053817.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=387;mismatches=0;indels=0;unknowns=0;Target=FBgn0053817.2 387 1 .;locus=RLOC_00013717
Chr1	stalkie_big_nohaplotig	exon	170790862	170791248	100	-	.	Parent=FBgn0053817.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	170790862	170791248	.	-	0	Parent=FBgn0053817.2.mrna1
Chr1	gffcl	locus	170796136	170796521	.	+	.	ID=RLOC_00013719;geneIDs=FBgn0053870.2.path1;transcripts=FBgn0053870.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	170796136	170796521	.	+	.	ID=FBgn0053870.2.mrna1;geneID=FBgn0053870.2.path1;Name=FBgn0053870.2;Dir=indeterminatecoverage=99.7;identity=100.0;matches=386;mismatches=0;indels=0;unknowns=0;Target=FBgn0053870.2 387 2 .;CDS_Target=FBgn0053870.2 387 4 .;locus=RLOC_00013719
Chr1	stalkie_big_nohaplotig	exon	170796136	170796521	100	+	.	Parent=FBgn0053870.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	170796138	170796521	.	+	0	Parent=FBgn0053870.2.mrna1
Chr1	gffcl	locus	170809779	170811588	.	+	.	ID=RLOC_00013722;geneIDs=Dp_FBgn0243606.path4;transcripts=Dp_FBgn0243606.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	170809779	170811588	.	+	.	ID=Dp_FBgn0243606.mrna4;geneID=Dp_FBgn0243606.path4;Name=Dp_FBgn0243606;Dir=indeterminatecoverage=98.8;identity=97.7;matches=1777;mismatches=33;indels=9;unknowns=0;Target=Dp_FBgn0243606 1819 1 .;CDS_Target=Dp_FBgn0243606 1818 1 .;locus=RLOC_00013722
Chr1	stalkie_big_nohaplotig	exon	170809779	170811588	97	+	.	Parent=Dp_FBgn0243606.mrna4
Chr1	stalkie_big_nohaplotig	CDS	170809779	170811587	.	+	0	Parent=Dp_FBgn0243606.mrna4
Chr1	gffcl	locus	170831667	170832925	.	-	.	ID=RLOC_00013723;geneIDs=ORF971.path3,comp160705_c3_seq1.path3;transcripts=ORF971.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	170831667	170832925	.	-	.	ID=ORF971.mrna3;geneID=ORF971.path3;Name=ORF971;Dir=indeterminatecoverage=96.6;identity=98.2;matches=1240;mismatches=19;indels=4;unknowns=0;Target=ORF971 1308 46 .;CDS_Target=ORF971 1308 466 .;locus=RLOC_00013723
Chr1	stalkie_big_nohaplotig	exon	170831667	170832925	98	-	.	Parent=ORF971.mrna3
Chr1	stalkie_big_nohaplotig	CDS	170831667	170832509	.	-	0	Parent=ORF971.mrna3
Chr1	gffcl	locus	170837727	170838815	.	+	.	ID=RLOC_00013724;geneIDs=comp163499_c0_seq1.path5;transcripts=comp163499_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	170837727	170838815	.	+	.	ID=comp163499_c0_seq1.mrna5;geneID=comp163499_c0_seq1.path5;Name=comp163499_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.2;matches=1059;mismatches=30;indels=0;unknowns=0;Target=comp163499_c0_seq1 1090 2 .;locus=RLOC_00013724
Chr1	stalkie_big_nohaplotig	exon	170837727	170838815	97	+	.	Parent=comp163499_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	170837727	170838815	.	+	0	Parent=comp163499_c0_seq1.mrna5
Chr1	gffcl	locus	170959293	170963399	.	-	.	ID=RLOC_00013725;geneIDs=comp157671_c1_seq1.path1;transcripts=comp157671_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	170959293	170963399	.	-	.	ID=comp157671_c1_seq1.mrna1;geneID=comp157671_c1_seq1.path1;Name=comp157671_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=1553;mismatches=27;indels=5;unknowns=0;locus=RLOC_00013725
Chr1	stalkie_big_nohaplotig	exon	170959293	170959563	93	-	.	Parent=comp157671_c1_seq1.mrna1;Target=comp157671_c1_seq1 1581 1314 .
Chr1	stalkie_big_nohaplotig	exon	170962087	170963399	98	-	.	Parent=comp157671_c1_seq1.mrna1;Target=comp157671_c1_seq1 1313 1 .
Chr1	stalkie_big_nohaplotig	CDS	170959421	170959563	.	-	2	Parent=comp157671_c1_seq1.mrna1;Target=comp157671_c1_seq1 1456 1314 .
Chr1	stalkie_big_nohaplotig	CDS	170962087	170962723	.	-	0	Parent=comp157671_c1_seq1.mrna1;Target=comp157671_c1_seq1 1313 677 .
Chr1	gffcl	locus	170976412	170982858	.	+	.	ID=RLOC_00013726;geneIDs=FBgn0052755.3.path1;transcripts=FBgn0052755.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	170976412	170982858	.	+	.	ID=FBgn0052755.3.mrna1;geneID=FBgn0052755.3.path1;Name=FBgn0052755.3;Dir=sensecoverage=100.0;identity=98.9;matches=1050;mismatches=10;indels=2;unknowns=0;locus=RLOC_00013726
Chr1	stalkie_big_nohaplotig	exon	170976412	170976563	96	+	.	Parent=FBgn0052755.3.mrna1;Target=FBgn0052755.3 1 154 +
Chr1	stalkie_big_nohaplotig	exon	170981826	170982015	99	+	.	Parent=FBgn0052755.3.mrna1;Target=FBgn0052755.3 155 344 +
Chr1	stalkie_big_nohaplotig	exon	170982081	170982369	99	+	.	Parent=FBgn0052755.3.mrna1;Target=FBgn0052755.3 345 633 +
Chr1	stalkie_big_nohaplotig	exon	170982430	170982858	99	+	.	Parent=FBgn0052755.3.mrna1;Target=FBgn0052755.3 634 1062 +
Chr1	stalkie_big_nohaplotig	CDS	170976482	170976563	.	+	0	Parent=FBgn0052755.3.mrna1;Target=FBgn0052755.3 73 154 +
Chr1	stalkie_big_nohaplotig	CDS	170981826	170982015	.	+	2	Parent=FBgn0052755.3.mrna1;Target=FBgn0052755.3 155 344 +
Chr1	stalkie_big_nohaplotig	CDS	170982081	170982369	.	+	1	Parent=FBgn0052755.3.mrna1;Target=FBgn0052755.3 345 633 +
Chr1	stalkie_big_nohaplotig	CDS	170982430	170982858	.	+	0	Parent=FBgn0052755.3.mrna1;Target=FBgn0052755.3 634 1062 +
Chr1	gffcl	locus	170989059	171005409	.	+	.	ID=RLOC_00013727;geneIDs=FBgn0052755.2.path1,comp154524_c0_seq1.path1;transcripts=comp154524_c0_seq1.mrna1,FBgn0052755.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	170989059	171005409	.	+	.	ID=comp154524_c0_seq1.mrna1;geneID=comp154524_c0_seq1.path1;Name=comp154524_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=1557;mismatches=8;indels=0;unknowns=0;locus=RLOC_00013727
Chr1	stalkie_big_nohaplotig	exon	170989059	170989245	98	+	.	Parent=comp154524_c0_seq1.mrna1;Target=comp154524_c0_seq1 1379 1565 -
Chr1	stalkie_big_nohaplotig	exon	170996822	170996990	100	+	.	Parent=comp154524_c0_seq1.mrna1;Target=comp154524_c0_seq1 1210 1378 -
Chr1	stalkie_big_nohaplotig	exon	171003993	171004269	99	+	.	Parent=comp154524_c0_seq1.mrna1;Target=comp154524_c0_seq1 933 1209 -
Chr1	stalkie_big_nohaplotig	exon	171004346	171004692	100	+	.	Parent=comp154524_c0_seq1.mrna1;Target=comp154524_c0_seq1 586 932 -
Chr1	stalkie_big_nohaplotig	exon	171004825	171005409	99	+	.	Parent=comp154524_c0_seq1.mrna1;Target=comp154524_c0_seq1 1 585 -
Chr1	stalkie_big_nohaplotig	CDS	170989179	170989245	.	+	0	Parent=comp154524_c0_seq1.mrna1;Target=comp154524_c0_seq1 1379 1445 .
Chr1	stalkie_big_nohaplotig	CDS	170996822	170996990	.	+	2	Parent=comp154524_c0_seq1.mrna1;Target=comp154524_c0_seq1 1210 1378 .
Chr1	stalkie_big_nohaplotig	CDS	171003993	171004269	.	+	1	Parent=comp154524_c0_seq1.mrna1;Target=comp154524_c0_seq1 933 1209 .
Chr1	stalkie_big_nohaplotig	CDS	171004346	171004692	.	+	0	Parent=comp154524_c0_seq1.mrna1;Target=comp154524_c0_seq1 586 932 .
Chr1	stalkie_big_nohaplotig	CDS	171004825	171005269	.	+	1	Parent=comp154524_c0_seq1.mrna1;Target=comp154524_c0_seq1 141 585 .
Chr1	stalkie_big_nohaplotig	mRNA	170989152	170998312	.	+	.	ID=FBgn0052755.2.mrna1;geneID=FBgn0052755.2.path1;Name=FBgn0052755.2;Dir=sensecoverage=100.0;identity=99.3;matches=1320;mismatches=9;indels=0;unknowns=0;locus=RLOC_00013727
Chr1	stalkie_big_nohaplotig	exon	170989152	170989245	97	+	.	Parent=FBgn0052755.2.mrna1;Target=FBgn0052755.2 1 94 +
Chr1	stalkie_big_nohaplotig	exon	170996822	170996990	100	+	.	Parent=FBgn0052755.2.mrna1;Target=FBgn0052755.2 95 263 +
Chr1	stalkie_big_nohaplotig	exon	170997061	170997337	99	+	.	Parent=FBgn0052755.2.mrna1;Target=FBgn0052755.2 264 540 +
Chr1	stalkie_big_nohaplotig	exon	170997414	170997760	100	+	.	Parent=FBgn0052755.2.mrna1;Target=FBgn0052755.2 541 887 +
Chr1	stalkie_big_nohaplotig	exon	170997871	170998312	98	+	.	Parent=FBgn0052755.2.mrna1;Target=FBgn0052755.2 888 1329 +
Chr1	stalkie_big_nohaplotig	CDS	170989152	170989245	.	+	0	Parent=FBgn0052755.2.mrna1;Target=FBgn0052755.2 1 94 +
Chr1	stalkie_big_nohaplotig	CDS	170996822	170996990	.	+	2	Parent=FBgn0052755.2.mrna1;Target=FBgn0052755.2 95 263 +
Chr1	stalkie_big_nohaplotig	CDS	170997061	170997337	.	+	1	Parent=FBgn0052755.2.mrna1;Target=FBgn0052755.2 264 540 +
Chr1	stalkie_big_nohaplotig	CDS	170997414	170997760	.	+	0	Parent=FBgn0052755.2.mrna1;Target=FBgn0052755.2 541 887 +
Chr1	stalkie_big_nohaplotig	CDS	170997871	170998312	.	+	1	Parent=FBgn0052755.2.mrna1;Target=FBgn0052755.2 888 1329 +
Chr1	gffcl	locus	170994014	170994557	.	-	.	ID=RLOC_00013728;geneIDs=comp150474_c0_seq1.path1;transcripts=comp150474_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	170994014	170994557	.	-	.	ID=comp150474_c0_seq1.mrna1;geneID=comp150474_c0_seq1.path1;Name=comp150474_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=531;mismatches=13;indels=0;unknowns=0;Target=comp150474_c0_seq1 544 1 .;CDS_Target=comp150474_c0_seq1 362 222 .;locus=RLOC_00013728
Chr1	stalkie_big_nohaplotig	exon	170994014	170994557	97	-	.	Parent=comp150474_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	170994196	170994336	.	-	0	Parent=comp150474_c0_seq1.mrna1
Chr1	gffcl	locus	171000825	171001971	.	+	.	ID=RLOC_00013729;geneIDs=FBgn0052755.4.path1;transcripts=FBgn0052755.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171000825	171001971	.	+	.	ID=FBgn0052755.4.mrna1;geneID=FBgn0052755.4.path1;Name=FBgn0052755.4;Dir=sensecoverage=98.0;identity=98.8;matches=939;mismatches=11;indels=0;unknowns=0;locus=RLOC_00013729
Chr1	stalkie_big_nohaplotig	exon	171000825	171000932	100	+	.	Parent=FBgn0052755.4.mrna1;Target=FBgn0052755.4 20 127 +
Chr1	stalkie_big_nohaplotig	exon	171000997	171001189	99	+	.	Parent=FBgn0052755.4.mrna1;Target=FBgn0052755.4 128 320 +
Chr1	stalkie_big_nohaplotig	exon	171001260	171001524	98	+	.	Parent=FBgn0052755.4.mrna1;Target=FBgn0052755.4 321 585 +
Chr1	stalkie_big_nohaplotig	exon	171001588	171001971	98	+	.	Parent=FBgn0052755.4.mrna1;Target=FBgn0052755.4 586 969 +
Chr1	stalkie_big_nohaplotig	CDS	171000827	171000932	.	+	0	Parent=FBgn0052755.4.mrna1;Target=FBgn0052755.4 22 127 +
Chr1	stalkie_big_nohaplotig	CDS	171000997	171001189	.	+	2	Parent=FBgn0052755.4.mrna1;Target=FBgn0052755.4 128 320 +
Chr1	stalkie_big_nohaplotig	CDS	171001260	171001524	.	+	1	Parent=FBgn0052755.4.mrna1;Target=FBgn0052755.4 321 585 +
Chr1	stalkie_big_nohaplotig	CDS	171001588	171001971	.	+	0	Parent=FBgn0052755.4.mrna1;Target=FBgn0052755.4 586 969 +
Chr1	gffcl	locus	171011793	171016943	.	+	.	ID=RLOC_00013730;geneIDs=FBgn0029826.1.path1;transcripts=FBgn0029826.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171011793	171016943	.	+	.	ID=FBgn0029826.1.mrna1;geneID=FBgn0029826.1.path1;Name=FBgn0029826.1;Dir=sensecoverage=100.0;identity=99.1;matches=962;mismatches=7;indels=2;unknowns=0;locus=RLOC_00013730
Chr1	stalkie_big_nohaplotig	exon	171011793	171011900	92	+	.	Parent=FBgn0029826.1.mrna1;Target=FBgn0029826.1 1 106 +
Chr1	stalkie_big_nohaplotig	exon	171015957	171016164	100	+	.	Parent=FBgn0029826.1.mrna1;Target=FBgn0029826.1 107 314 +
Chr1	stalkie_big_nohaplotig	exon	171016220	171016505	99	+	.	Parent=FBgn0029826.1.mrna1;Target=FBgn0029826.1 315 600 +
Chr1	stalkie_big_nohaplotig	exon	171016575	171016943	100	+	.	Parent=FBgn0029826.1.mrna1;Target=FBgn0029826.1 601 969 +
Chr1	stalkie_big_nohaplotig	CDS	171011813	171011900	.	+	0	Parent=FBgn0029826.1.mrna1;Target=FBgn0029826.1 19 106 +
Chr1	stalkie_big_nohaplotig	CDS	171015957	171016164	.	+	2	Parent=FBgn0029826.1.mrna1;Target=FBgn0029826.1 107 314 +
Chr1	stalkie_big_nohaplotig	CDS	171016220	171016505	.	+	1	Parent=FBgn0029826.1.mrna1;Target=FBgn0029826.1 315 600 +
Chr1	stalkie_big_nohaplotig	CDS	171016575	171016943	.	+	0	Parent=FBgn0029826.1.mrna1;Target=FBgn0029826.1 601 969 +
Chr1	gffcl	locus	171022451	171023642	.	+	.	ID=RLOC_00013732;geneIDs=FBgn0029827.2.path1;transcripts=FBgn0029827.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171022451	171023642	.	+	.	ID=FBgn0029827.2.mrna1;geneID=FBgn0029827.2.path1;Name=FBgn0029827.2;Dir=sensecoverage=100.0;identity=97.3;matches=908;mismatches=25;indels=0;unknowns=0;locus=RLOC_00013732
Chr1	stalkie_big_nohaplotig	exon	171022451	171022523	95	+	.	Parent=FBgn0029827.2.mrna1;Target=FBgn0029827.2 1 73 +
Chr1	stalkie_big_nohaplotig	exon	171022661	171022835	97	+	.	Parent=FBgn0029827.2.mrna1;Target=FBgn0029827.2 74 248 +
Chr1	stalkie_big_nohaplotig	exon	171022902	171023181	99	+	.	Parent=FBgn0029827.2.mrna1;Target=FBgn0029827.2 249 528 +
Chr1	stalkie_big_nohaplotig	exon	171023238	171023642	96	+	.	Parent=FBgn0029827.2.mrna1;Target=FBgn0029827.2 529 933 +
Chr1	stalkie_big_nohaplotig	CDS	171022451	171022523	.	+	0	Parent=FBgn0029827.2.mrna1;Target=FBgn0029827.2 1 73 +
Chr1	stalkie_big_nohaplotig	CDS	171022661	171022835	.	+	2	Parent=FBgn0029827.2.mrna1;Target=FBgn0029827.2 74 248 +
Chr1	stalkie_big_nohaplotig	CDS	171022902	171023181	.	+	1	Parent=FBgn0029827.2.mrna1;Target=FBgn0029827.2 249 528 +
Chr1	stalkie_big_nohaplotig	CDS	171023238	171023642	.	+	0	Parent=FBgn0029827.2.mrna1;Target=FBgn0029827.2 529 933 +
Chr1	gffcl	locus	171026384	171028284	.	+	.	ID=RLOC_00013733;geneIDs=FBgn0029827.1.path1;transcripts=FBgn0029827.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171026384	171028284	.	+	.	ID=FBgn0029827.1.mrna1;geneID=FBgn0029827.1.path1;Name=FBgn0029827.1;Dir=sensecoverage=100.0;identity=99.0;matches=1010;mismatches=10;indels=0;unknowns=0;locus=RLOC_00013733
Chr1	stalkie_big_nohaplotig	exon	171026384	171026477	98	+	.	Parent=FBgn0029827.1.mrna1;Target=FBgn0029827.1 1 94 +
Chr1	stalkie_big_nohaplotig	exon	171026539	171026752	99	+	.	Parent=FBgn0029827.1.mrna1;Target=FBgn0029827.1 95 308 +
Chr1	stalkie_big_nohaplotig	exon	171027497	171027782	98	+	.	Parent=FBgn0029827.1.mrna1;Target=FBgn0029827.1 309 594 +
Chr1	stalkie_big_nohaplotig	exon	171027859	171028284	99	+	.	Parent=FBgn0029827.1.mrna1;Target=FBgn0029827.1 595 1020 +
Chr1	stalkie_big_nohaplotig	CDS	171026384	171026477	.	+	0	Parent=FBgn0029827.1.mrna1;Target=FBgn0029827.1 1 94 +
Chr1	stalkie_big_nohaplotig	CDS	171026539	171026752	.	+	2	Parent=FBgn0029827.1.mrna1;Target=FBgn0029827.1 95 308 +
Chr1	stalkie_big_nohaplotig	CDS	171027497	171027782	.	+	1	Parent=FBgn0029827.1.mrna1;Target=FBgn0029827.1 309 594 +
Chr1	stalkie_big_nohaplotig	CDS	171027859	171028284	.	+	0	Parent=FBgn0029827.1.mrna1;Target=FBgn0029827.1 595 1020 +
Chr1	gffcl	locus	171150248	171193503	.	-	.	ID=RLOC_00013734;geneIDs=FBgn0259162.1.path2;transcripts=FBgn0259162.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	171150248	171193503	.	-	.	ID=FBgn0259162.1.mrna2;geneID=FBgn0259162.1.path2;Name=FBgn0259162.1;Dir=sensecoverage=90.0;identity=99.8;matches=1555;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013734
Chr1	stalkie_big_nohaplotig	exon	171150248	171151053	99	-	.	Parent=FBgn0259162.1.mrna2;Target=FBgn0259162.1 926 1731 +
Chr1	stalkie_big_nohaplotig	exon	171151117	171151308	100	-	.	Parent=FBgn0259162.1.mrna2;Target=FBgn0259162.1 734 925 +
Chr1	stalkie_big_nohaplotig	exon	171171204	171171404	100	-	.	Parent=FBgn0259162.1.mrna2;Target=FBgn0259162.1 533 733 +
Chr1	stalkie_big_nohaplotig	exon	171190904	171191120	100	-	.	Parent=FBgn0259162.1.mrna2;Target=FBgn0259162.1 316 532 +
Chr1	stalkie_big_nohaplotig	exon	171193362	171193503	98	-	.	Parent=FBgn0259162.1.mrna2;Target=FBgn0259162.1 174 315 +
Chr1	stalkie_big_nohaplotig	CDS	171150248	171151053	.	-	0	Parent=FBgn0259162.1.mrna2;Target=FBgn0259162.1 926 1731 +
Chr1	stalkie_big_nohaplotig	CDS	171151117	171151308	.	-	0	Parent=FBgn0259162.1.mrna2;Target=FBgn0259162.1 734 925 +
Chr1	stalkie_big_nohaplotig	CDS	171171204	171171404	.	-	0	Parent=FBgn0259162.1.mrna2;Target=FBgn0259162.1 533 733 +
Chr1	stalkie_big_nohaplotig	CDS	171190904	171191120	.	-	1	Parent=FBgn0259162.1.mrna2;Target=FBgn0259162.1 316 532 +
Chr1	stalkie_big_nohaplotig	CDS	171193362	171193503	.	-	2	Parent=FBgn0259162.1.mrna2;Target=FBgn0259162.1 174 315 +
Chr1	gffcl	locus	171312038	171314336	.	+	.	ID=RLOC_00013735;geneIDs=ORF635.path1;transcripts=ORF635.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171312038	171314336	.	+	.	ID=ORF635.mrna1;geneID=ORF635.path1;Name=ORF635;Dir=sensecoverage=100.0;identity=99.7;matches=1576;mismatches=5;indels=0;unknowns=0;locus=RLOC_00013735
Chr1	stalkie_big_nohaplotig	exon	171312038	171312207	100	+	.	Parent=ORF635.mrna1;Target=ORF635 1 170 +
Chr1	stalkie_big_nohaplotig	exon	171312860	171313569	100	+	.	Parent=ORF635.mrna1;Target=ORF635 171 880 +
Chr1	stalkie_big_nohaplotig	exon	171313636	171314336	99	+	.	Parent=ORF635.mrna1;Target=ORF635 881 1581 +
Chr1	stalkie_big_nohaplotig	CDS	171312038	171312207	.	+	0	Parent=ORF635.mrna1;Target=ORF635 1 170 +
Chr1	stalkie_big_nohaplotig	CDS	171312860	171313569	.	+	1	Parent=ORF635.mrna1;Target=ORF635 171 880 +
Chr1	stalkie_big_nohaplotig	CDS	171313636	171314336	.	+	2	Parent=ORF635.mrna1;Target=ORF635 881 1581 +
Chr1	gffcl	locus	171364891	171365261	.	-	.	ID=RLOC_00013737;geneIDs=comp144982_c0_seq1.path1;transcripts=comp144982_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171364891	171365261	.	-	.	ID=comp144982_c0_seq1.mrna1;geneID=comp144982_c0_seq1.path1;Name=comp144982_c0_seq1;Dir=indeterminatecoverage=99.7;identity=97.0;matches=360;mismatches=11;indels=0;unknowns=0;Target=comp144982_c0_seq1 371 1 .;CDS_Target=comp144982_c0_seq1 331 191 .;locus=RLOC_00013737
Chr1	stalkie_big_nohaplotig	exon	171364891	171365261	97	-	.	Parent=comp144982_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	171364931	171365071	.	-	0	Parent=comp144982_c0_seq1.mrna1
Chr1	gffcl	locus	171365946	171368423	.	-	.	ID=RLOC_00013738;geneIDs=comp154611_c0_seq1.path1;transcripts=comp154611_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171365946	171368423	.	-	.	ID=comp154611_c0_seq1.mrna1;geneID=comp154611_c0_seq1.path1;Name=comp154611_c0_seq1;Dir=sensecoverage=100.0;identity=97.0;matches=1532;mismatches=33;indels=15;unknowns=0;Target=comp154611_c0_seq1 309 464 +;locus=RLOC_00013738
Chr1	stalkie_big_nohaplotig	exon	171365946	171366670	99	-	.	Parent=comp154611_c0_seq1.mrna1;Target=comp154611_c0_seq1 885 1609 +
Chr1	stalkie_big_nohaplotig	exon	171367044	171367059	81	-	.	Parent=comp154611_c0_seq1.mrna1;Target=comp154611_c0_seq1 840 855 +
Chr1	stalkie_big_nohaplotig	exon	171367219	171367805	94	-	.	Parent=comp154611_c0_seq1.mrna1;Target=comp154611_c0_seq1 238 839 +
Chr1	stalkie_big_nohaplotig	exon	171368187	171368423	97	-	.	Parent=comp154611_c0_seq1.mrna1;Target=comp154611_c0_seq1 1 237 +
Chr1	stalkie_big_nohaplotig	CDS	171367579	171367734	.	-	0	Parent=comp154611_c0_seq1.mrna1
Chr1	gffcl	locus	171369970	171371258	.	+	.	ID=RLOC_00013739;geneIDs=comp149938_c1_seq1.path1;transcripts=comp149938_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171369970	171371258	.	+	.	ID=comp149938_c1_seq1.mrna1;geneID=comp149938_c1_seq1.path1;Name=comp149938_c1_seq1;Dir=antisensecoverage=99.8;identity=99.8;matches=888;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013739
Chr1	stalkie_big_nohaplotig	exon	171369970	171370472	100	+	.	Parent=comp149938_c1_seq1.mrna1;Target=comp149938_c1_seq1 388 890 -
Chr1	stalkie_big_nohaplotig	exon	171370872	171371258	99	+	.	Parent=comp149938_c1_seq1.mrna1;Target=comp149938_c1_seq1 1 387 -
Chr1	stalkie_big_nohaplotig	CDS	171370006	171370472	.	+	0	Parent=comp149938_c1_seq1.mrna1;Target=comp149938_c1_seq1 388 854 .
Chr1	stalkie_big_nohaplotig	CDS	171370872	171371055	.	+	1	Parent=comp149938_c1_seq1.mrna1;Target=comp149938_c1_seq1 204 387 .
Chr1	gffcl	locus	171375533	171378622	.	+	.	ID=RLOC_00013740;geneIDs=FBgn0030051.7.path1;transcripts=FBgn0030051.7.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171375533	171378622	.	+	.	ID=FBgn0030051.7.mrna1;geneID=FBgn0030051.7.path1;Name=FBgn0030051.7;Dir=sensecoverage=100.0;identity=99.1;matches=1110;mismatches=6;indels=4;unknowns=0;locus=RLOC_00013740
Chr1	stalkie_big_nohaplotig	exon	171375533	171375632	100	+	.	Parent=FBgn0030051.7.mrna1;Target=FBgn0030051.7 1 100 +
Chr1	stalkie_big_nohaplotig	exon	171375699	171375953	98	+	.	Parent=FBgn0030051.7.mrna1;Target=FBgn0030051.7 101 355 +
Chr1	stalkie_big_nohaplotig	exon	171377174	171377262	100	+	.	Parent=FBgn0030051.7.mrna1;Target=FBgn0030051.7 356 444 +
Chr1	stalkie_big_nohaplotig	exon	171377333	171377445	99	+	.	Parent=FBgn0030051.7.mrna1;Target=FBgn0030051.7 445 557 +
Chr1	stalkie_big_nohaplotig	exon	171377709	171377861	99	+	.	Parent=FBgn0030051.7.mrna1;Target=FBgn0030051.7 558 710 +
Chr1	stalkie_big_nohaplotig	exon	171378094	171378176	100	+	.	Parent=FBgn0030051.7.mrna1;Target=FBgn0030051.7 711 793 +
Chr1	stalkie_big_nohaplotig	exon	171378226	171378390	97	+	.	Parent=FBgn0030051.7.mrna1;Target=FBgn0030051.7 794 954 +
Chr1	stalkie_big_nohaplotig	exon	171378461	171378622	100	+	.	Parent=FBgn0030051.7.mrna1;Target=FBgn0030051.7 955 1116 +
Chr1	stalkie_big_nohaplotig	CDS	171375533	171375632	.	+	0	Parent=FBgn0030051.7.mrna1;Target=FBgn0030051.7 1 100 +
Chr1	stalkie_big_nohaplotig	CDS	171375699	171375953	.	+	2	Parent=FBgn0030051.7.mrna1;Target=FBgn0030051.7 101 355 +
Chr1	stalkie_big_nohaplotig	CDS	171377174	171377262	.	+	2	Parent=FBgn0030051.7.mrna1;Target=FBgn0030051.7 356 444 +
Chr1	stalkie_big_nohaplotig	CDS	171377333	171377445	.	+	0	Parent=FBgn0030051.7.mrna1;Target=FBgn0030051.7 445 557 +
Chr1	stalkie_big_nohaplotig	CDS	171377709	171377861	.	+	1	Parent=FBgn0030051.7.mrna1;Target=FBgn0030051.7 558 710 +
Chr1	stalkie_big_nohaplotig	CDS	171378094	171378176	.	+	1	Parent=FBgn0030051.7.mrna1;Target=FBgn0030051.7 711 793 +
Chr1	stalkie_big_nohaplotig	CDS	171378226	171378390	.	+	2	Parent=FBgn0030051.7.mrna1;Target=FBgn0030051.7 794 954 +
Chr1	stalkie_big_nohaplotig	CDS	171378461	171378622	.	+	2	Parent=FBgn0030051.7.mrna1;Target=FBgn0030051.7 955 1116 +
Chr1	gffcl	locus	171384348	171394501	.	+	.	ID=RLOC_00013741;geneIDs=FBgn0030051.6.path1;transcripts=FBgn0030051.6.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171384348	171394501	.	+	.	ID=FBgn0030051.6.mrna1;geneID=FBgn0030051.6.path1;Name=FBgn0030051.6;Dir=sensecoverage=100.0;identity=99.7;matches=706;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013741
Chr1	stalkie_big_nohaplotig	exon	171384348	171384364	100	+	.	Parent=FBgn0030051.6.mrna1;Target=FBgn0030051.6 1 17 +
Chr1	stalkie_big_nohaplotig	exon	171384431	171384553	100	+	.	Parent=FBgn0030051.6.mrna1;Target=FBgn0030051.6 18 140 +
Chr1	stalkie_big_nohaplotig	exon	171385202	171385262	100	+	.	Parent=FBgn0030051.6.mrna1;Target=FBgn0030051.6 141 201 +
Chr1	stalkie_big_nohaplotig	exon	171393786	171393877	100	+	.	Parent=FBgn0030051.6.mrna1;Target=FBgn0030051.6 202 293 +
Chr1	stalkie_big_nohaplotig	exon	171393947	171394029	100	+	.	Parent=FBgn0030051.6.mrna1;Target=FBgn0030051.6 294 376 +
Chr1	stalkie_big_nohaplotig	exon	171394103	171394263	100	+	.	Parent=FBgn0030051.6.mrna1;Target=FBgn0030051.6 377 537 +
Chr1	stalkie_big_nohaplotig	exon	171394331	171394501	98	+	.	Parent=FBgn0030051.6.mrna1;Target=FBgn0030051.6 538 708 +
Chr1	stalkie_big_nohaplotig	CDS	171384348	171384364	.	+	0	Parent=FBgn0030051.6.mrna1;Target=FBgn0030051.6 1 17 +
Chr1	stalkie_big_nohaplotig	CDS	171384431	171384553	.	+	1	Parent=FBgn0030051.6.mrna1;Target=FBgn0030051.6 18 140 +
Chr1	stalkie_big_nohaplotig	CDS	171385202	171385262	.	+	1	Parent=FBgn0030051.6.mrna1;Target=FBgn0030051.6 141 201 +
Chr1	stalkie_big_nohaplotig	CDS	171393786	171393877	.	+	0	Parent=FBgn0030051.6.mrna1;Target=FBgn0030051.6 202 293 +
Chr1	stalkie_big_nohaplotig	CDS	171393947	171394029	.	+	1	Parent=FBgn0030051.6.mrna1;Target=FBgn0030051.6 294 376 +
Chr1	stalkie_big_nohaplotig	CDS	171394103	171394263	.	+	2	Parent=FBgn0030051.6.mrna1;Target=FBgn0030051.6 377 537 +
Chr1	stalkie_big_nohaplotig	CDS	171394331	171394501	.	+	0	Parent=FBgn0030051.6.mrna1;Target=FBgn0030051.6 538 708 +
Chr1	gffcl	locus	171388150	171399214	.	+	.	ID=RLOC_00013742;geneIDs=FBgn0030051.5.path1;transcripts=FBgn0030051.5.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171388150	171399214	.	+	.	ID=FBgn0030051.5.mrna1;geneID=FBgn0030051.5.path1;Name=FBgn0030051.5;Dir=sensecoverage=100.0;identity=99.3;matches=980;mismatches=7;indels=0;unknowns=0;locus=RLOC_00013742
Chr1	stalkie_big_nohaplotig	exon	171388150	171388189	100	+	.	Parent=FBgn0030051.5.mrna1;Target=FBgn0030051.5 1 40 +
Chr1	stalkie_big_nohaplotig	exon	171388275	171388400	98	+	.	Parent=FBgn0030051.5.mrna1;Target=FBgn0030051.5 41 166 +
Chr1	stalkie_big_nohaplotig	exon	171397231	171397263	100	+	.	Parent=FBgn0030051.5.mrna1;Target=FBgn0030051.5 167 199 +
Chr1	stalkie_big_nohaplotig	exon	171397324	171397430	99	+	.	Parent=FBgn0030051.5.mrna1;Target=FBgn0030051.5 200 306 +
Chr1	stalkie_big_nohaplotig	exon	171397506	171397621	98	+	.	Parent=FBgn0030051.5.mrna1;Target=FBgn0030051.5 307 422 +
Chr1	stalkie_big_nohaplotig	exon	171398405	171398554	100	+	.	Parent=FBgn0030051.5.mrna1;Target=FBgn0030051.5 423 572 +
Chr1	stalkie_big_nohaplotig	exon	171398612	171398694	100	+	.	Parent=FBgn0030051.5.mrna1;Target=FBgn0030051.5 573 655 +
Chr1	stalkie_big_nohaplotig	exon	171398823	171398983	98	+	.	Parent=FBgn0030051.5.mrna1;Target=FBgn0030051.5 656 816 +
Chr1	stalkie_big_nohaplotig	exon	171399044	171399214	100	+	.	Parent=FBgn0030051.5.mrna1;Target=FBgn0030051.5 817 987 +
Chr1	stalkie_big_nohaplotig	CDS	171388346	171388400	.	+	0	Parent=FBgn0030051.5.mrna1;Target=FBgn0030051.5 112 166 +
Chr1	stalkie_big_nohaplotig	CDS	171397231	171397263	.	+	2	Parent=FBgn0030051.5.mrna1;Target=FBgn0030051.5 167 199 +
Chr1	stalkie_big_nohaplotig	CDS	171397324	171397430	.	+	2	Parent=FBgn0030051.5.mrna1;Target=FBgn0030051.5 200 306 +
Chr1	stalkie_big_nohaplotig	CDS	171397506	171397621	.	+	0	Parent=FBgn0030051.5.mrna1;Target=FBgn0030051.5 307 422 +
Chr1	stalkie_big_nohaplotig	CDS	171398405	171398554	.	+	1	Parent=FBgn0030051.5.mrna1;Target=FBgn0030051.5 423 572 +
Chr1	stalkie_big_nohaplotig	CDS	171398612	171398694	.	+	1	Parent=FBgn0030051.5.mrna1;Target=FBgn0030051.5 573 655 +
Chr1	stalkie_big_nohaplotig	CDS	171398823	171398983	.	+	2	Parent=FBgn0030051.5.mrna1;Target=FBgn0030051.5 656 816 +
Chr1	stalkie_big_nohaplotig	CDS	171399044	171399214	.	+	0	Parent=FBgn0030051.5.mrna1;Target=FBgn0030051.5 817 987 +
Chr1	gffcl	locus	171401585	171402922	.	.	.	ID=RLOC_00013743;geneIDs=comp95213_c0_seq1.path1,comp135737_c0_seq1.path1;transcripts=comp135737_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171401585	171402333	.	-	.	ID=comp135737_c0_seq1.mrna1;geneID=comp135737_c0_seq1.path1;Name=comp135737_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.9;matches=682;mismatches=67;indels=1;unknowns=0;Target=comp135737_c0_seq1 750 1 .;CDS_Target=comp135737_c0_seq1 289 179 .;locus=RLOC_00013743
Chr1	stalkie_big_nohaplotig	exon	171401585	171402333	90	-	.	Parent=comp135737_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	171402046	171402156	.	-	0	Parent=comp135737_c0_seq1.mrna1
Chr1	gffcl	locus	171403060	171404289	.	+	.	ID=RLOC_00013744;geneIDs=comp158770_c1_seq1.path1;transcripts=comp158770_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171403060	171404289	.	+	.	ID=comp158770_c1_seq1.mrna1;geneID=comp158770_c1_seq1.path1;Name=comp158770_c1_seq1;Dir=indeterminatecoverage=99.9;identity=99.3;matches=1222;mismatches=6;indels=3;unknowns=0;Target=comp158770_c1_seq1 1229 1 .;CDS_Target=comp158770_c1_seq1 483 385 .;locus=RLOC_00013744
Chr1	stalkie_big_nohaplotig	exon	171403060	171404289	99	+	.	Parent=comp158770_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	171403444	171403544	.	+	0	Parent=comp158770_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171415528	171416551	.	+	.	ID=ORF1926.mrna1;geneID=ORF1926.path1;Name=ORF1926;Dir=sensecoverage=100.0;identity=98.9;matches=949;mismatches=11;indels=0;unknowns=0;locus=RLOC_00013746
Chr1	stalkie_big_nohaplotig	exon	171415528	171415610	100	+	.	Parent=ORF1926.mrna1;Target=ORF1926 1 83 +
Chr1	stalkie_big_nohaplotig	exon	171415675	171416551	98	+	.	Parent=ORF1926.mrna1;Target=ORF1926 84 960 +
Chr1	stalkie_big_nohaplotig	CDS	171415528	171415610	.	+	0	Parent=ORF1926.mrna1;Target=ORF1926 1 83 +
Chr1	stalkie_big_nohaplotig	CDS	171415675	171416551	.	+	1	Parent=ORF1926.mrna1;Target=ORF1926 84 960 +
Chr1	gffcl	locus	171548645	171555714	.	+	.	ID=RLOC_00013747;geneIDs=FBgn0086778.1.path1;transcripts=FBgn0086778.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171548645	171555714	.	+	.	ID=FBgn0086778.1.mrna1;geneID=FBgn0086778.1.path1;Name=FBgn0086778.1;Dir=sensecoverage=22.2;identity=99.7;matches=364;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013747
Chr1	stalkie_big_nohaplotig	exon	171548645	171548727	98	+	.	Parent=FBgn0086778.1.mrna1;Target=FBgn0086778.1 603 685 +
Chr1	stalkie_big_nohaplotig	exon	171548892	171549086	100	+	.	Parent=FBgn0086778.1.mrna1;Target=FBgn0086778.1 686 880 +
Chr1	stalkie_big_nohaplotig	exon	171555628	171555714	100	+	.	Parent=FBgn0086778.1.mrna1;Target=FBgn0086778.1 881 967 +
Chr1	stalkie_big_nohaplotig	CDS	171548646	171548727	.	+	0	Parent=FBgn0086778.1.mrna1;Target=FBgn0086778.1 604 685 +
Chr1	stalkie_big_nohaplotig	CDS	171548892	171549086	.	+	2	Parent=FBgn0086778.1.mrna1;Target=FBgn0086778.1 686 880 +
Chr1	stalkie_big_nohaplotig	CDS	171555628	171555714	.	+	2	Parent=FBgn0086778.1.mrna1;Target=FBgn0086778.1 881 967 +
Chr1	gffcl	locus	171601497	171603301	.	-	.	ID=RLOC_00013748;geneIDs=comp155863_c0_seq1.path1;transcripts=comp155863_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171601497	171603301	.	-	.	ID=comp155863_c0_seq1.mrna1;geneID=comp155863_c0_seq1.path1;Name=comp155863_c0_seq1;Dir=antisensecoverage=99.8;identity=96.8;matches=794;mismatches=26;indels=0;unknowns=0;locus=RLOC_00013748
Chr1	stalkie_big_nohaplotig	exon	171601497	171601787	97	-	.	Parent=comp155863_c0_seq1.mrna1;Target=comp155863_c0_seq1 1 291 -
Chr1	stalkie_big_nohaplotig	exon	171601846	171601956	96	-	.	Parent=comp155863_c0_seq1.mrna1;Target=comp155863_c0_seq1 292 402 -
Chr1	stalkie_big_nohaplotig	exon	171602884	171603301	96	-	.	Parent=comp155863_c0_seq1.mrna1;Target=comp155863_c0_seq1 403 820 -
Chr1	stalkie_big_nohaplotig	CDS	171601644	171601787	.	-	0	Parent=comp155863_c0_seq1.mrna1;Target=comp155863_c0_seq1 148 291 .
Chr1	stalkie_big_nohaplotig	CDS	171601846	171601956	.	-	0	Parent=comp155863_c0_seq1.mrna1;Target=comp155863_c0_seq1 292 402 .
Chr1	stalkie_big_nohaplotig	CDS	171602884	171602967	.	-	0	Parent=comp155863_c0_seq1.mrna1;Target=comp155863_c0_seq1 403 486 .
Chr1	gffcl	locus	171664646	171666370	.	+	.	ID=RLOC_00013749;geneIDs=FBgn0035558.1.path1;transcripts=FBgn0035558.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171664646	171666370	.	+	.	ID=FBgn0035558.1.mrna1;geneID=FBgn0035558.1.path1;Name=FBgn0035558.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1723;mismatches=2;indels=0;unknowns=0;Target=FBgn0035558.1 1725 1 .;locus=RLOC_00013749
Chr1	stalkie_big_nohaplotig	exon	171664646	171666370	99	+	.	Parent=FBgn0035558.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	171664646	171666370	.	+	0	Parent=FBgn0035558.1.mrna1
Chr1	gffcl	locus	171666930	171667805	.	+	.	ID=RLOC_00013750;geneIDs=comp157296_c0_seq1.path1;transcripts=comp157296_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171666930	171667805	.	+	.	ID=comp157296_c0_seq1.mrna1;geneID=comp157296_c0_seq1.path1;Name=comp157296_c0_seq1;Dir=antisensecoverage=99.5;identity=97.3;matches=647;mismatches=14;indels=4;unknowns=0;Target=comp157296_c0_seq1 414 491 .;locus=RLOC_00013750
Chr1	stalkie_big_nohaplotig	exon	171666930	171667026	94	+	.	Parent=comp157296_c0_seq1.mrna1;Target=comp157296_c0_seq1 569 661 -
Chr1	stalkie_big_nohaplotig	exon	171667238	171667805	97	+	.	Parent=comp157296_c0_seq1.mrna1;Target=comp157296_c0_seq1 1 568 -
Chr1	stalkie_big_nohaplotig	CDS	171667315	171667392	.	+	0	Parent=comp157296_c0_seq1.mrna1
Chr1	gffcl	locus	171669179	171671060	.	-	.	ID=RLOC_00013751;geneIDs=comp162462_c0_seq1.path1;transcripts=comp162462_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171669179	171671060	.	-	.	ID=comp162462_c0_seq1.mrna1;geneID=comp162462_c0_seq1.path1;Name=comp162462_c0_seq1;Dir=indeterminatecoverage=99.4;identity=98.2;matches=1851;mismatches=29;indels=5;unknowns=0;Target=comp162462_c0_seq1 1883 1 .;CDS_Target=comp162462_c0_seq1 1164 1120 .;locus=RLOC_00013751
Chr1	stalkie_big_nohaplotig	exon	171669179	171671060	98	-	.	Parent=comp162462_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	171669897	171669941	.	-	0	Parent=comp162462_c0_seq1.mrna1
Chr1	gffcl	locus	171693802	171695681	.	-	.	ID=RLOC_00013753;geneIDs=FBgn0033206.1.path1;transcripts=FBgn0033206.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171693802	171695681	.	-	.	ID=FBgn0033206.1.mrna1;geneID=FBgn0033206.1.path1;Name=FBgn0033206.1;Dir=sensecoverage=100.0;identity=99.8;matches=1521;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013753
Chr1	stalkie_big_nohaplotig	exon	171693802	171694012	100	-	.	Parent=FBgn0033206.1.mrna1;Target=FBgn0033206.1 1314 1524 +
Chr1	stalkie_big_nohaplotig	exon	171694075	171694648	100	-	.	Parent=FBgn0033206.1.mrna1;Target=FBgn0033206.1 740 1313 +
Chr1	stalkie_big_nohaplotig	exon	171694710	171694872	100	-	.	Parent=FBgn0033206.1.mrna1;Target=FBgn0033206.1 577 739 +
Chr1	stalkie_big_nohaplotig	exon	171694934	171695088	100	-	.	Parent=FBgn0033206.1.mrna1;Target=FBgn0033206.1 422 576 +
Chr1	stalkie_big_nohaplotig	exon	171695144	171695274	98	-	.	Parent=FBgn0033206.1.mrna1;Target=FBgn0033206.1 291 421 +
Chr1	stalkie_big_nohaplotig	exon	171695335	171695474	99	-	.	Parent=FBgn0033206.1.mrna1;Target=FBgn0033206.1 151 290 +
Chr1	stalkie_big_nohaplotig	exon	171695532	171695681	100	-	.	Parent=FBgn0033206.1.mrna1;Target=FBgn0033206.1 1 150 +
Chr1	stalkie_big_nohaplotig	CDS	171693802	171694012	.	-	1	Parent=FBgn0033206.1.mrna1;Target=FBgn0033206.1 1314 1524 +
Chr1	stalkie_big_nohaplotig	CDS	171694075	171694648	.	-	2	Parent=FBgn0033206.1.mrna1;Target=FBgn0033206.1 740 1313 +
Chr1	stalkie_big_nohaplotig	CDS	171694710	171694872	.	-	0	Parent=FBgn0033206.1.mrna1;Target=FBgn0033206.1 577 739 +
Chr1	stalkie_big_nohaplotig	CDS	171694934	171695088	.	-	2	Parent=FBgn0033206.1.mrna1;Target=FBgn0033206.1 422 576 +
Chr1	stalkie_big_nohaplotig	CDS	171695144	171695274	.	-	1	Parent=FBgn0033206.1.mrna1;Target=FBgn0033206.1 291 421 +
Chr1	stalkie_big_nohaplotig	CDS	171695335	171695474	.	-	0	Parent=FBgn0033206.1.mrna1;Target=FBgn0033206.1 151 290 +
Chr1	stalkie_big_nohaplotig	CDS	171695532	171695681	.	-	0	Parent=FBgn0033206.1.mrna1;Target=FBgn0033206.1 1 150 +
Chr1	gffcl	locus	171699256	171701392	.	-	.	ID=RLOC_00013754;geneIDs=FBgn0030738.2.path1;transcripts=FBgn0030738.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171699256	171701392	.	-	.	ID=FBgn0030738.2.mrna1;geneID=FBgn0030738.2.path1;Name=FBgn0030738.2;Dir=sensecoverage=100.0;identity=99.9;matches=1895;mismatches=0;indels=1;unknowns=0;Target=FBgn0030738.2 3 833 +;locus=RLOC_00013754
Chr1	stalkie_big_nohaplotig	exon	171699256	171699375	100	-	.	Parent=FBgn0030738.2.mrna1;Target=FBgn0030738.2 1777 1896 +
Chr1	stalkie_big_nohaplotig	exon	171699447	171699851	100	-	.	Parent=FBgn0030738.2.mrna1;Target=FBgn0030738.2 1372 1776 +
Chr1	stalkie_big_nohaplotig	exon	171699908	171700271	100	-	.	Parent=FBgn0030738.2.mrna1;Target=FBgn0030738.2 1008 1371 +
Chr1	stalkie_big_nohaplotig	exon	171700330	171700495	100	-	.	Parent=FBgn0030738.2.mrna1;Target=FBgn0030738.2 842 1007 +
Chr1	stalkie_big_nohaplotig	exon	171700553	171701392	99	-	.	Parent=FBgn0030738.2.mrna1;Target=FBgn0030738.2 1 841 +
Chr1	stalkie_big_nohaplotig	CDS	171700561	171701390	.	-	0	Parent=FBgn0030738.2.mrna1
Chr1	gffcl	locus	171704113	171707582	.	+	.	ID=RLOC_00013755;geneIDs=FBgn0032924.1.path1;transcripts=FBgn0032924.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171704113	171707582	.	+	.	ID=FBgn0032924.1.mrna1;geneID=FBgn0032924.1.path1;Name=FBgn0032924.1;Dir=sensecoverage=98.4;identity=100.0;matches=1925;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013755
Chr1	stalkie_big_nohaplotig	exon	171704113	171704308	100	+	.	Parent=FBgn0032924.1.mrna1;Target=FBgn0032924.1 1 196 +
Chr1	stalkie_big_nohaplotig	exon	171704370	171704432	100	+	.	Parent=FBgn0032924.1.mrna1;Target=FBgn0032924.1 197 259 +
Chr1	stalkie_big_nohaplotig	exon	171704571	171704708	100	+	.	Parent=FBgn0032924.1.mrna1;Target=FBgn0032924.1 260 397 +
Chr1	stalkie_big_nohaplotig	exon	171705831	171706039	100	+	.	Parent=FBgn0032924.1.mrna1;Target=FBgn0032924.1 398 606 +
Chr1	stalkie_big_nohaplotig	exon	171706106	171706311	100	+	.	Parent=FBgn0032924.1.mrna1;Target=FBgn0032924.1 607 812 +
Chr1	stalkie_big_nohaplotig	exon	171706408	171707375	100	+	.	Parent=FBgn0032924.1.mrna1;Target=FBgn0032924.1 813 1780 +
Chr1	stalkie_big_nohaplotig	exon	171707438	171707582	100	+	.	Parent=FBgn0032924.1.mrna1;Target=FBgn0032924.1 1781 1925 +
Chr1	stalkie_big_nohaplotig	CDS	171704113	171704308	.	+	0	Parent=FBgn0032924.1.mrna1;Target=FBgn0032924.1 1 196 +
Chr1	stalkie_big_nohaplotig	CDS	171704370	171704432	.	+	2	Parent=FBgn0032924.1.mrna1;Target=FBgn0032924.1 197 259 +
Chr1	stalkie_big_nohaplotig	CDS	171704571	171704708	.	+	2	Parent=FBgn0032924.1.mrna1;Target=FBgn0032924.1 260 397 +
Chr1	stalkie_big_nohaplotig	CDS	171705831	171706039	.	+	2	Parent=FBgn0032924.1.mrna1;Target=FBgn0032924.1 398 606 +
Chr1	stalkie_big_nohaplotig	CDS	171706106	171706311	.	+	0	Parent=FBgn0032924.1.mrna1;Target=FBgn0032924.1 607 812 +
Chr1	stalkie_big_nohaplotig	CDS	171706408	171707375	.	+	1	Parent=FBgn0032924.1.mrna1;Target=FBgn0032924.1 813 1780 +
Chr1	stalkie_big_nohaplotig	CDS	171707438	171707580	.	+	2	Parent=FBgn0032924.1.mrna1;Target=FBgn0032924.1 1781 1923 +
Chr1	gffcl	locus	171710992	171711942	.	+	.	ID=RLOC_00013756;geneIDs=ORF1961.path1;transcripts=ORF1961.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171710992	171711942	.	+	.	ID=ORF1961.mrna1;geneID=ORF1961.path1;Name=ORF1961;Dir=indeterminatecoverage=100.0;identity=100.0;matches=951;mismatches=0;indels=0;unknowns=0;Target=ORF1961 951 1 .;locus=RLOC_00013756
Chr1	stalkie_big_nohaplotig	exon	171710992	171711942	100	+	.	Parent=ORF1961.mrna1
Chr1	stalkie_big_nohaplotig	CDS	171710992	171711942	.	+	0	Parent=ORF1961.mrna1
Chr1	gffcl	locus	171719350	171719577	.	-	.	ID=RLOC_00013757;geneIDs=comp152806_c1_seq1.path3;transcripts=comp152806_c1_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	171719350	171719577	.	-	.	ID=comp152806_c1_seq1.mrna3;geneID=comp152806_c1_seq1.path3;Name=comp152806_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=226;mismatches=2;indels=0;unknowns=0;Target=comp152806_c1_seq1 228 1 .;locus=RLOC_00013757
Chr1	stalkie_big_nohaplotig	exon	171719350	171719577	99	-	.	Parent=comp152806_c1_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	171719350	171719577	.	-	0	Parent=comp152806_c1_seq1.mrna3
Chr1	gffcl	locus	171724744	171724966	.	-	.	ID=RLOC_00013758;geneIDs=comp152806_c1_seq1.path4;transcripts=comp152806_c1_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	171724744	171724966	.	-	.	ID=comp152806_c1_seq1.mrna4;geneID=comp152806_c1_seq1.path4;Name=comp152806_c1_seq1;Dir=indeterminatecoverage=100.0;identity=96.1;matches=219;mismatches=4;indels=5;unknowns=0;Target=comp152806_c1_seq1 228 1 .;CDS_Target=comp152806_c1_seq1 71 3 .;locus=RLOC_00013758
Chr1	stalkie_big_nohaplotig	exon	171724744	171724966	96	-	.	Parent=comp152806_c1_seq1.mrna4
Chr1	stalkie_big_nohaplotig	CDS	171724900	171724964	.	-	0	Parent=comp152806_c1_seq1.mrna4
Chr1	gffcl	locus	171755226	171755712	.	+	.	ID=RLOC_00013759;geneIDs=comp119242_c0_seq1.path1;transcripts=comp119242_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171755226	171755712	.	+	.	ID=comp119242_c0_seq1.mrna1;geneID=comp119242_c0_seq1.path1;Name=comp119242_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.8;matches=486;mismatches=1;indels=0;unknowns=0;Target=comp119242_c0_seq1 491 5 .;CDS_Target=comp119242_c0_seq1 254 174 .;locus=RLOC_00013759
Chr1	stalkie_big_nohaplotig	exon	171755226	171755712	99	+	.	Parent=comp119242_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	171755395	171755475	.	+	0	Parent=comp119242_c0_seq1.mrna1
Chr1	gffcl	locus	171765149	171778010	.	+	.	ID=RLOC_00013760;geneIDs=comp113583_c0_seq1.path1;transcripts=comp113583_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171765149	171778010	.	+	.	ID=comp113583_c0_seq1.mrna1;geneID=comp113583_c0_seq1.path1;Name=comp113583_c0_seq1;Dir=indeterminatecoverage=82.9;identity=100.0;matches=252;mismatches=0;indels=0;unknowns=0;Target=comp113583_c0_seq1 292 233 .;locus=RLOC_00013760
Chr1	stalkie_big_nohaplotig	exon	171765149	171765150	100	+	.	Parent=comp113583_c0_seq1.mrna1;Target=comp113583_c0_seq1 44 43 .
Chr1	stalkie_big_nohaplotig	exon	171770596	171770598	100	+	.	Parent=comp113583_c0_seq1.mrna1;Target=comp113583_c0_seq1 47 45 .
Chr1	stalkie_big_nohaplotig	exon	171777764	171778010	100	+	.	Parent=comp113583_c0_seq1.mrna1;Target=comp113583_c0_seq1 294 48 .
Chr1	stalkie_big_nohaplotig	CDS	171777949	171778008	.	+	0	Parent=comp113583_c0_seq1.mrna1
Chr1	gffcl	locus	171775700	171776639	.	-	.	ID=RLOC_00013761;geneIDs=comp161810_c0_seq1.path1;transcripts=comp161810_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171775700	171776639	.	-	.	ID=comp161810_c0_seq1.mrna1;geneID=comp161810_c0_seq1.path1;Name=comp161810_c0_seq1;Dir=indeterminatecoverage=89.6;identity=95.6;matches=907;mismatches=32;indels=10;unknowns=0;Target=comp161810_c0_seq1 948 1 .;CDS_Target=comp161810_c0_seq1 574 431 .;locus=RLOC_00013761
Chr1	stalkie_big_nohaplotig	exon	171775700	171776639	95	-	.	Parent=comp161810_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	171776070	171776213	.	-	0	Parent=comp161810_c0_seq1.mrna1
Chr1	gffcl	locus	171780150	171781397	.	-	.	ID=RLOC_00013762;geneIDs=ORF1251.path1;transcripts=ORF1251.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171780150	171781397	.	-	.	ID=ORF1251.mrna1;geneID=ORF1251.path1;Name=ORF1251;Dir=sensecoverage=100.0;identity=99.9;matches=1163;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013762
Chr1	stalkie_big_nohaplotig	exon	171780150	171781245	99	-	.	Parent=ORF1251.mrna1;Target=ORF1251 69 1164 +
Chr1	stalkie_big_nohaplotig	exon	171781330	171781397	100	-	.	Parent=ORF1251.mrna1;Target=ORF1251 1 68 +
Chr1	stalkie_big_nohaplotig	CDS	171780150	171781245	.	-	1	Parent=ORF1251.mrna1;Target=ORF1251 69 1164 +
Chr1	stalkie_big_nohaplotig	CDS	171781330	171781397	.	-	0	Parent=ORF1251.mrna1;Target=ORF1251 1 68 +
Chr1	gffcl	locus	171782016	171782982	.	+	.	ID=RLOC_00013763;geneIDs=comp157669_c0_seq1.path1;transcripts=comp157669_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171782016	171782982	.	+	.	ID=comp157669_c0_seq1.mrna1;geneID=comp157669_c0_seq1.path1;Name=comp157669_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=966;mismatches=1;indels=0;unknowns=0;Target=comp157669_c0_seq1 967 1 .;CDS_Target=comp157669_c0_seq1 815 669 .;locus=RLOC_00013763
Chr1	stalkie_big_nohaplotig	exon	171782016	171782982	99	+	.	Parent=comp157669_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	171782684	171782830	.	+	0	Parent=comp157669_c0_seq1.mrna1
Chr1	gffcl	locus	171804271	171807269	.	-	.	ID=RLOC_00013765;geneIDs=ORF108.path3;transcripts=ORF108.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	171804271	171807269	.	-	.	ID=ORF108.mrna3;geneID=ORF108.path3;Name=ORF108;Dir=indeterminatecoverage=99.3;identity=99.8;matches=2994;mismatches=5;indels=0;unknowns=0;Target=ORF108 2999 1 .;CDS_Target=ORF108 2997 1 .;locus=RLOC_00013765
Chr1	stalkie_big_nohaplotig	exon	171804271	171807269	99	-	.	Parent=ORF108.mrna3
Chr1	stalkie_big_nohaplotig	CDS	171804273	171807269	.	-	0	Parent=ORF108.mrna3
Chr1	gffcl	locus	171879265	171879542	.	+	.	ID=RLOC_00013766;geneIDs=comp158064_c2_seq1.path1;transcripts=comp158064_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171879265	171879542	.	+	.	ID=comp158064_c2_seq1.mrna1;geneID=comp158064_c2_seq1.path1;Name=comp158064_c2_seq1;Dir=indeterminatecoverage=77.7;identity=96.8;matches=269;mismatches=9;indels=0;unknowns=0;Target=comp158064_c2_seq1 278 1 .;CDS_Target=comp158064_c2_seq1 80 3 .;locus=RLOC_00013766
Chr1	stalkie_big_nohaplotig	exon	171879265	171879542	96	+	.	Parent=comp158064_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	171879267	171879344	.	+	0	Parent=comp158064_c2_seq1.mrna1
Chr1	gffcl	locus	171882732	171883616	.	+	.	ID=RLOC_00013767;geneIDs=comp146291_c1_seq1.path1;transcripts=comp146291_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171882732	171883616	.	+	.	ID=comp146291_c1_seq1.mrna1;geneID=comp146291_c1_seq1.path1;Name=comp146291_c1_seq1;Dir=indeterminatecoverage=99.8;identity=99.2;matches=878;mismatches=4;indels=3;unknowns=0;Target=comp146291_c1_seq1 882 1 .;CDS_Target=comp146291_c1_seq1 512 435 .;locus=RLOC_00013767
Chr1	stalkie_big_nohaplotig	exon	171882732	171883616	99	+	.	Parent=comp146291_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	171883166	171883243	.	+	0	Parent=comp146291_c1_seq1.mrna1
Chr1	gffcl	locus	171884887	171890395	.	-	.	ID=RLOC_00013768;geneIDs=FBgn0003028.1.path1;transcripts=FBgn0003028.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171884887	171890395	.	-	.	ID=FBgn0003028.1.mrna1;geneID=FBgn0003028.1.path1;Name=FBgn0003028.1;Dir=sensecoverage=99.9;identity=99.6;matches=3152;mismatches=12;indels=0;unknowns=0;locus=RLOC_00013768
Chr1	stalkie_big_nohaplotig	exon	171884887	171885069	100	-	.	Parent=FBgn0003028.1.mrna1;Target=FBgn0003028.1 2986 3168 +
Chr1	stalkie_big_nohaplotig	exon	171886430	171886900	99	-	.	Parent=FBgn0003028.1.mrna1;Target=FBgn0003028.1 2515 2985 +
Chr1	stalkie_big_nohaplotig	exon	171887787	171888985	99	-	.	Parent=FBgn0003028.1.mrna1;Target=FBgn0003028.1 1316 2514 +
Chr1	stalkie_big_nohaplotig	exon	171889085	171890395	99	-	.	Parent=FBgn0003028.1.mrna1;Target=FBgn0003028.1 5 1315 +
Chr1	stalkie_big_nohaplotig	CDS	171884887	171885069	.	-	0	Parent=FBgn0003028.1.mrna1;Target=FBgn0003028.1 2986 3168 +
Chr1	stalkie_big_nohaplotig	CDS	171886430	171886900	.	-	0	Parent=FBgn0003028.1.mrna1;Target=FBgn0003028.1 2515 2985 +
Chr1	stalkie_big_nohaplotig	CDS	171887787	171888985	.	-	2	Parent=FBgn0003028.1.mrna1;Target=FBgn0003028.1 1316 2514 +
Chr1	stalkie_big_nohaplotig	CDS	171889085	171890393	.	-	0	Parent=FBgn0003028.1.mrna1;Target=FBgn0003028.1 7 1315 +
Chr1	gffcl	locus	171894634	171894978	.	+	.	ID=RLOC_00013769;geneIDs=comp158221_c0_seq1.path1;transcripts=comp158221_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171894634	171894978	.	+	.	ID=comp158221_c0_seq1.mrna1;geneID=comp158221_c0_seq1.path1;Name=comp158221_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=343;mismatches=2;indels=0;unknowns=0;Target=comp158221_c0_seq1 345 1 .;CDS_Target=comp158221_c0_seq1 151 2 .;locus=RLOC_00013769
Chr1	stalkie_big_nohaplotig	exon	171894634	171894978	99	+	.	Parent=comp158221_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	171894635	171894784	.	+	0	Parent=comp158221_c0_seq1.mrna1
Chr1	gffcl	locus	171908344	171909199	.	+	.	ID=RLOC_00013770;geneIDs=FBgn0030073.1.path1;transcripts=FBgn0030073.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171908344	171909199	.	+	.	ID=FBgn0030073.1.mrna1;geneID=FBgn0030073.1.path1;Name=FBgn0030073.1;Dir=sensecoverage=100.0;identity=99.9;matches=758;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013770
Chr1	stalkie_big_nohaplotig	exon	171908344	171908928	99	+	.	Parent=FBgn0030073.1.mrna1;Target=FBgn0030073.1 1 585 +
Chr1	stalkie_big_nohaplotig	exon	171909026	171909199	100	+	.	Parent=FBgn0030073.1.mrna1;Target=FBgn0030073.1 586 759 +
Chr1	stalkie_big_nohaplotig	CDS	171908344	171908928	.	+	0	Parent=FBgn0030073.1.mrna1;Target=FBgn0030073.1 1 585 +
Chr1	stalkie_big_nohaplotig	CDS	171909026	171909199	.	+	0	Parent=FBgn0030073.1.mrna1;Target=FBgn0030073.1 586 759 +
Chr1	gffcl	locus	171923813	171923903	.	+	.	ID=RLOC_00013771;geneIDs=comp162537_c0_seq1.path2;transcripts=comp162537_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	171923813	171923903	.	+	.	ID=comp162537_c0_seq1.mrna2;geneID=comp162537_c0_seq1.path2;Name=comp162537_c0_seq1;Dir=indeterminatecoverage=4.2;identity=100.0;matches=91;mismatches=0;indels=0;unknowns=0;Target=comp162537_c0_seq1 2149 2059 .;locus=RLOC_00013771
Chr1	stalkie_big_nohaplotig	exon	171923813	171923903	100	+	.	Parent=comp162537_c0_seq1.mrna2
Chr1	gffcl	locus	171926344	171928613	.	-	.	ID=RLOC_00013772;geneIDs=comp159646_c6_seq1.path1;transcripts=comp159646_c6_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171926344	171928613	.	-	.	ID=comp159646_c6_seq1.mrna1;geneID=comp159646_c6_seq1.path1;Name=comp159646_c6_seq1;Dir=indeterminatecoverage=99.6;identity=99.3;matches=2254;mismatches=16;indels=0;unknowns=0;Target=comp159646_c6_seq1 2278 9 .;CDS_Target=comp159646_c6_seq1 226 71 .;locus=RLOC_00013772
Chr1	stalkie_big_nohaplotig	exon	171926344	171928613	99	-	.	Parent=comp159646_c6_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	171928396	171928551	.	-	0	Parent=comp159646_c6_seq1.mrna1
Chr1	gffcl	locus	171944544	171944799	.	-	.	ID=RLOC_00013773;geneIDs=comp162183_c4_seq1.path1;transcripts=comp162183_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171944544	171944799	.	-	.	ID=comp162183_c4_seq1.mrna1;geneID=comp162183_c4_seq1.path1;Name=comp162183_c4_seq1;Dir=indeterminatecoverage=22.8;identity=100.0;matches=256;mismatches=0;indels=0;unknowns=0;Target=comp162183_c4_seq1 256 1 .;locus=RLOC_00013773
Chr1	stalkie_big_nohaplotig	exon	171944544	171944799	100	-	.	Parent=comp162183_c4_seq1.mrna1
Chr1	gffcl	locus	171950115	171951416	.	-	.	ID=RLOC_00013774;geneIDs=comp162871_c1_seq1.path1;transcripts=comp162871_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171950115	171951416	.	-	.	ID=comp162871_c1_seq1.mrna1;geneID=comp162871_c1_seq1.path1;Name=comp162871_c1_seq1;Dir=indeterminatecoverage=97.2;identity=93.5;matches=1266;mismatches=29;indels=59;unknowns=0;Target=comp162871_c1_seq1 1347 1 .;CDS_Target=comp162871_c1_seq1 825 724 .;locus=RLOC_00013774
Chr1	stalkie_big_nohaplotig	exon	171950115	171951416	93	-	.	Parent=comp162871_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	171950592	171950693	.	-	0	Parent=comp162871_c1_seq1.mrna1
Chr1	gffcl	locus	171960112	171961077	.	-	.	ID=RLOC_00013775;geneIDs=comp157221_c2_seq1.path1;transcripts=comp157221_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	171960112	171961077	.	-	.	ID=comp157221_c2_seq1.mrna1;geneID=comp157221_c2_seq1.path1;Name=comp157221_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=964;mismatches=2;indels=1;unknowns=0;Target=comp157221_c2_seq1 967 1 .;CDS_Target=comp157221_c2_seq1 304 107 .;locus=RLOC_00013775
Chr1	stalkie_big_nohaplotig	exon	171960112	171961077	99	-	.	Parent=comp157221_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	171960775	171960972	.	-	0	Parent=comp157221_c2_seq1.mrna1
Chr1	gffcl	locus	172007543	172009880	.	-	.	ID=RLOC_00013776;geneIDs=comp155518_c3_seq1.path1;transcripts=comp155518_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172007543	172009880	.	-	.	ID=comp155518_c3_seq1.mrna1;geneID=comp155518_c3_seq1.path1;Name=comp155518_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=2325;mismatches=13;indels=3;unknowns=0;Target=comp155518_c3_seq1 2342 2 .;CDS_Target=comp155518_c3_seq1 2124 1651 .;locus=RLOC_00013776
Chr1	stalkie_big_nohaplotig	exon	172007543	172009880	99	-	.	Parent=comp155518_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	172007761	172008232	.	-	0	Parent=comp155518_c3_seq1.mrna1
Chr1	gffcl	locus	172026532	172027139	.	-	.	ID=RLOC_00013777;geneIDs=comp160431_c0_seq1.path1;transcripts=comp160431_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172026532	172027139	.	-	.	ID=comp160431_c0_seq1.mrna1;geneID=comp160431_c0_seq1.path1;Name=comp160431_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=601;mismatches=7;indels=0;unknowns=0;Target=comp160431_c0_seq1 608 1 .;CDS_Target=comp160431_c0_seq1 528 1 .;locus=RLOC_00013777
Chr1	stalkie_big_nohaplotig	exon	172026532	172027139	98	-	.	Parent=comp160431_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	172026612	172027139	.	-	0	Parent=comp160431_c0_seq1.mrna1
Chr1	gffcl	locus	172036965	172038185	.	+	.	ID=RLOC_00013778;geneIDs=comp155877_c3_seq1.path1;transcripts=comp155877_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172036965	172038185	.	+	.	ID=comp155877_c3_seq1.mrna1;geneID=comp155877_c3_seq1.path1;Name=comp155877_c3_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=1193;mismatches=26;indels=2;unknowns=0;Target=comp155877_c3_seq1 1219 1 .;CDS_Target=comp155877_c3_seq1 898 731 .;locus=RLOC_00013778
Chr1	stalkie_big_nohaplotig	exon	172036965	172038185	97	+	.	Parent=comp155877_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	172037695	172037862	.	+	0	Parent=comp155877_c3_seq1.mrna1
Chr1	gffcl	locus	172055891	172057563	.	-	.	ID=RLOC_00013779;geneIDs=comp157227_c4_seq1.path1;transcripts=comp157227_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172055891	172057563	.	-	.	ID=comp157227_c4_seq1.mrna1;geneID=comp157227_c4_seq1.path1;Name=comp157227_c4_seq1;Dir=indeterminatecoverage=91.2;identity=98.6;matches=1649;mismatches=16;indels=8;unknowns=0;Target=comp157227_c4_seq1 1665 1 .;CDS_Target=comp157227_c4_seq1 1302 1132 .;locus=RLOC_00013779
Chr1	stalkie_big_nohaplotig	exon	172055891	172057563	98	-	.	Parent=comp157227_c4_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	172056254	172056424	.	-	0	Parent=comp157227_c4_seq1.mrna1
Chr1	gffcl	locus	172062955	172064230	.	-	.	ID=RLOC_00013780;geneIDs=comp155953_c0_seq1.path1;transcripts=comp155953_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172062955	172064230	.	-	.	ID=comp155953_c0_seq1.mrna1;geneID=comp155953_c0_seq1.path1;Name=comp155953_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1266;mismatches=10;indels=0;unknowns=0;Target=comp155953_c0_seq1 1276 1 .;CDS_Target=comp155953_c0_seq1 1053 892 .;locus=RLOC_00013780
Chr1	stalkie_big_nohaplotig	exon	172062955	172064230	99	-	.	Parent=comp155953_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	172063178	172063339	.	-	0	Parent=comp155953_c0_seq1.mrna1
Chr1	gffcl	locus	172105185	172106248	.	+	.	ID=RLOC_00013781;geneIDs=comp148696_c2_seq1.path1;transcripts=comp148696_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172105185	172106248	.	+	.	ID=comp148696_c2_seq1.mrna1;geneID=comp148696_c2_seq1.path1;Name=comp148696_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1057;mismatches=7;indels=0;unknowns=0;Target=comp148696_c2_seq1 1064 1 .;CDS_Target=comp148696_c2_seq1 355 2 .;locus=RLOC_00013781
Chr1	stalkie_big_nohaplotig	exon	172105185	172106248	99	+	.	Parent=comp148696_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	172105186	172105539	.	+	0	Parent=comp148696_c2_seq1.mrna1
Chr1	gffcl	locus	172131869	172134791	.	+	.	ID=RLOC_00013782;geneIDs=comp155599_c0_seq1.path1;transcripts=comp155599_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172131869	172134791	.	+	.	ID=comp155599_c0_seq1.mrna1;geneID=comp155599_c0_seq1.path1;Name=comp155599_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.3;matches=1282;mismatches=22;indels=0;unknowns=0;Target=comp155599_c0_seq1 769 686 .;locus=RLOC_00013782
Chr1	stalkie_big_nohaplotig	exon	172131869	172132008	98	+	.	Parent=comp155599_c0_seq1.mrna1;Target=comp155599_c0_seq1 141 2 .
Chr1	stalkie_big_nohaplotig	exon	172133628	172134791	98	+	.	Parent=comp155599_c0_seq1.mrna1;Target=comp155599_c0_seq1 1305 142 .
Chr1	stalkie_big_nohaplotig	CDS	172134172	172134255	.	+	0	Parent=comp155599_c0_seq1.mrna1
Chr1	gffcl	locus	172134993	172143925	.	+	.	ID=RLOC_00013783;geneIDs=comp148276_c3_seq1.path1;transcripts=comp148276_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172134993	172143925	.	+	.	ID=comp148276_c3_seq1.mrna1;geneID=comp148276_c3_seq1.path1;Name=comp148276_c3_seq1;Dir=indeterminatecoverage=99.9;identity=98.8;matches=1188;mismatches=8;indels=7;unknowns=0;Target=comp148276_c3_seq1 974 825 .;locus=RLOC_00013783
Chr1	stalkie_big_nohaplotig	exon	172134993	172136014	98	+	.	Parent=comp148276_c3_seq1.mrna1;Target=comp148276_c3_seq1 1015 1 .
Chr1	stalkie_big_nohaplotig	exon	172143745	172143925	99	+	.	Parent=comp148276_c3_seq1.mrna1;Target=comp148276_c3_seq1 1196 1016 .
Chr1	stalkie_big_nohaplotig	CDS	172135824	172135973	.	+	0	Parent=comp148276_c3_seq1.mrna1
Chr1	gffcl	locus	172143943	172146407	.	+	.	ID=RLOC_00013784;geneIDs=comp161605_c0_seq1.path1;transcripts=comp161605_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172143943	172146407	.	+	.	ID=comp161605_c0_seq1.mrna1;geneID=comp161605_c0_seq1.path1;Name=comp161605_c0_seq1;Dir=indeterminatecoverage=97.7;identity=99.5;matches=2452;mismatches=13;indels=0;unknowns=0;Target=comp161605_c0_seq1 2465 1 .;CDS_Target=comp161605_c0_seq1 1240 992 .;locus=RLOC_00013784
Chr1	stalkie_big_nohaplotig	exon	172143943	172146407	99	+	.	Parent=comp161605_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	172144934	172145182	.	+	0	Parent=comp161605_c0_seq1.mrna1
Chr1	gffcl	locus	172188014	172190580	.	-	.	ID=RLOC_00013785;geneIDs=comp157092_c0_seq1.path1;transcripts=comp157092_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172188014	172190580	.	-	.	ID=comp157092_c0_seq1.mrna1;geneID=comp157092_c0_seq1.path1;Name=comp157092_c0_seq1;Dir=indeterminatecoverage=91.6;identity=96.7;matches=1345;mismatches=28;indels=18;unknowns=0;Target=comp157092_c0_seq1 1377 1234 .;locus=RLOC_00013785
Chr1	stalkie_big_nohaplotig	exon	172188014	172188429	95	-	.	Parent=comp157092_c0_seq1.mrna1;Target=comp157092_c0_seq1 1481 1066 .
Chr1	stalkie_big_nohaplotig	exon	172188434	172188731	98	-	.	Parent=comp157092_c0_seq1.mrna1;Target=comp157092_c0_seq1 974 678 .
Chr1	stalkie_big_nohaplotig	exon	172189921	172190580	96	-	.	Parent=comp157092_c0_seq1.mrna1;Target=comp157092_c0_seq1 677 1 .
Chr1	stalkie_big_nohaplotig	CDS	172188118	172188261	.	-	0	Parent=comp157092_c0_seq1.mrna1
Chr1	gffcl	locus	172226027	172226112	.	+	.	ID=RLOC_00013786;geneIDs=comp160482_c2_seq1.path2;transcripts=comp160482_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	172226027	172226112	.	+	.	ID=comp160482_c2_seq1.mrna2;geneID=comp160482_c2_seq1.path2;Name=comp160482_c2_seq1;Dir=indeterminatecoverage=22.8;identity=83.3;matches=75;mismatches=11;indels=4;unknowns=0;Target=comp160482_c2_seq1 395 306 .;locus=RLOC_00013786
Chr1	stalkie_big_nohaplotig	exon	172226027	172226112	83	+	.	Parent=comp160482_c2_seq1.mrna2
Chr1	gffcl	locus	172350266	173020184	.	-	.	ID=RLOC_00013788;geneIDs=FBgn0029002.1.path1;transcripts=FBgn0029002.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172350266	173020184	.	-	.	ID=FBgn0029002.1.mrna1;geneID=FBgn0029002.1.path1;Name=FBgn0029002.1;Dir=sensecoverage=79.7;identity=98.4;matches=677;mismatches=5;indels=6;unknowns=0;Target=FBgn0029002.1 3 152 +;locus=RLOC_00013788
Chr1	stalkie_big_nohaplotig	exon	172350266	172350270	100	-	.	Parent=FBgn0029002.1.mrna1;Target=FBgn0029002.1 725 729 +
Chr1	stalkie_big_nohaplotig	exon	172350287	172350294	100	-	.	Parent=FBgn0029002.1.mrna1;Target=FBgn0029002.1 676 683 +
Chr1	stalkie_big_nohaplotig	exon	173007285	173007404	92	-	.	Parent=FBgn0029002.1.mrna1;Target=FBgn0029002.1 551 675 +
Chr1	stalkie_big_nohaplotig	exon	173019636	173020184	99	-	.	Parent=FBgn0029002.1.mrna1;Target=FBgn0029002.1 1 550 +
Chr1	stalkie_big_nohaplotig	CDS	173020034	173020182	.	-	0	Parent=FBgn0029002.1.mrna1
Chr1	gffcl	locus	172374191	172374753	.	+	.	ID=RLOC_00013789;geneIDs=comp153852_c0_seq1.path2;transcripts=comp153852_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	172374191	172374753	.	+	.	ID=comp153852_c0_seq1.mrna2;geneID=comp153852_c0_seq1.path2;Name=comp153852_c0_seq1;Dir=antisensecoverage=99.4;identity=98.8;matches=500;mismatches=4;indels=2;unknowns=0;locus=RLOC_00013789
Chr1	stalkie_big_nohaplotig	exon	172374191	172374445	97	+	.	Parent=comp153852_c0_seq1.mrna2;Target=comp153852_c0_seq1 253 509 -
Chr1	stalkie_big_nohaplotig	exon	172374505	172374753	100	+	.	Parent=comp153852_c0_seq1.mrna2;Target=comp153852_c0_seq1 4 252 -
Chr1	stalkie_big_nohaplotig	CDS	172374305	172374445	.	+	0	Parent=comp153852_c0_seq1.mrna2;Target=comp153852_c0_seq1 253 393 .
Chr1	stalkie_big_nohaplotig	CDS	172374505	172374573	.	+	0	Parent=comp153852_c0_seq1.mrna2;Target=comp153852_c0_seq1 184 252 .
Chr1	gffcl	locus	172379443	172380424	.	-	.	ID=RLOC_00013790;geneIDs=comp159241_c0_seq1.path2;transcripts=comp159241_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	172379443	172380424	.	-	.	ID=comp159241_c0_seq1.mrna2;geneID=comp159241_c0_seq1.path2;Name=comp159241_c0_seq1;Dir=antisensecoverage=98.3;identity=98.7;matches=860;mismatches=11;indels=0;unknowns=0;locus=RLOC_00013790
Chr1	stalkie_big_nohaplotig	exon	172379443	172379942	99	-	.	Parent=comp159241_c0_seq1.mrna2;Target=comp159241_c0_seq1 3 502 -
Chr1	stalkie_big_nohaplotig	exon	172379999	172380112	99	-	.	Parent=comp159241_c0_seq1.mrna2;Target=comp159241_c0_seq1 503 616 -
Chr1	stalkie_big_nohaplotig	exon	172380168	172380424	97	-	.	Parent=comp159241_c0_seq1.mrna2;Target=comp159241_c0_seq1 617 873 -
Chr1	stalkie_big_nohaplotig	CDS	172379493	172379942	.	-	0	Parent=comp159241_c0_seq1.mrna2;Target=comp159241_c0_seq1 53 502 .
Chr1	stalkie_big_nohaplotig	CDS	172379999	172380010	.	-	0	Parent=comp159241_c0_seq1.mrna2;Target=comp159241_c0_seq1 503 514 .
Chr1	gffcl	locus	172398728	172398822	.	-	.	ID=RLOC_00013791;geneIDs=FBgn0036659.1.path1;transcripts=FBgn0036659.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172398728	172398822	.	-	.	ID=FBgn0036659.1.mrna1;geneID=FBgn0036659.1.path1;Name=FBgn0036659.1;Dir=indeterminatecoverage=5.6;identity=100.0;matches=95;mismatches=0;indels=0;unknowns=0;Target=FBgn0036659.1 95 1 .;locus=RLOC_00013791
Chr1	stalkie_big_nohaplotig	exon	172398728	172398822	100	-	.	Parent=FBgn0036659.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	172398728	172398822	.	-	0	Parent=FBgn0036659.1.mrna1
Chr1	gffcl	locus	172402441	172404880	.	+	.	ID=RLOC_00013792;geneIDs=FBgn0004556.1.path1;transcripts=FBgn0004556.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172402441	172404880	.	+	.	ID=FBgn0004556.1.mrna1;geneID=FBgn0004556.1.path1;Name=FBgn0004556.1;Dir=sensecoverage=100.0;identity=99.6;matches=2061;mismatches=6;indels=3;unknowns=0;locus=RLOC_00013792
Chr1	stalkie_big_nohaplotig	exon	172402441	172402496	98	+	.	Parent=FBgn0004556.1.mrna1;Target=FBgn0004556.1 1 56 +
Chr1	stalkie_big_nohaplotig	exon	172402551	172403413	99	+	.	Parent=FBgn0004556.1.mrna1;Target=FBgn0004556.1 57 922 +
Chr1	stalkie_big_nohaplotig	exon	172403475	172404012	100	+	.	Parent=FBgn0004556.1.mrna1;Target=FBgn0004556.1 923 1460 +
Chr1	stalkie_big_nohaplotig	exon	172404136	172404258	100	+	.	Parent=FBgn0004556.1.mrna1;Target=FBgn0004556.1 1461 1583 +
Chr1	stalkie_big_nohaplotig	exon	172404333	172404513	100	+	.	Parent=FBgn0004556.1.mrna1;Target=FBgn0004556.1 1584 1764 +
Chr1	stalkie_big_nohaplotig	exon	172404575	172404880	99	+	.	Parent=FBgn0004556.1.mrna1;Target=FBgn0004556.1 1765 2070 +
Chr1	stalkie_big_nohaplotig	CDS	172402441	172402496	.	+	0	Parent=FBgn0004556.1.mrna1;Target=FBgn0004556.1 1 56 +
Chr1	stalkie_big_nohaplotig	CDS	172402551	172403413	.	+	1	Parent=FBgn0004556.1.mrna1;Target=FBgn0004556.1 57 922 +
Chr1	stalkie_big_nohaplotig	CDS	172403475	172404012	.	+	2	Parent=FBgn0004556.1.mrna1;Target=FBgn0004556.1 923 1460 +
Chr1	stalkie_big_nohaplotig	CDS	172404136	172404258	.	+	1	Parent=FBgn0004556.1.mrna1;Target=FBgn0004556.1 1461 1583 +
Chr1	stalkie_big_nohaplotig	CDS	172404333	172404513	.	+	1	Parent=FBgn0004556.1.mrna1;Target=FBgn0004556.1 1584 1764 +
Chr1	stalkie_big_nohaplotig	CDS	172404575	172404880	.	+	0	Parent=FBgn0004556.1.mrna1;Target=FBgn0004556.1 1765 2070 +
Chr1	gffcl	locus	172407195	172415679	.	-	.	ID=RLOC_00013793;geneIDs=FBgn0042177.1.path1;transcripts=FBgn0042177.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172407195	172415679	.	-	.	ID=FBgn0042177.1.mrna1;geneID=FBgn0042177.1.path1;Name=FBgn0042177.1;Dir=sensecoverage=100.0;identity=99.7;matches=3257;mismatches=10;indels=0;unknowns=0;locus=RLOC_00013793
Chr1	stalkie_big_nohaplotig	exon	172407195	172407618	100	-	.	Parent=FBgn0042177.1.mrna1;Target=FBgn0042177.1 2844 3267 +
Chr1	stalkie_big_nohaplotig	exon	172407691	172407911	100	-	.	Parent=FBgn0042177.1.mrna1;Target=FBgn0042177.1 2623 2843 +
Chr1	stalkie_big_nohaplotig	exon	172407976	172409107	99	-	.	Parent=FBgn0042177.1.mrna1;Target=FBgn0042177.1 1491 2622 +
Chr1	stalkie_big_nohaplotig	exon	172410687	172410796	100	-	.	Parent=FBgn0042177.1.mrna1;Target=FBgn0042177.1 1381 1490 +
Chr1	stalkie_big_nohaplotig	exon	172410866	172411275	99	-	.	Parent=FBgn0042177.1.mrna1;Target=FBgn0042177.1 971 1380 +
Chr1	stalkie_big_nohaplotig	exon	172411350	172412074	99	-	.	Parent=FBgn0042177.1.mrna1;Target=FBgn0042177.1 246 970 +
Chr1	stalkie_big_nohaplotig	exon	172412154	172412326	98	-	.	Parent=FBgn0042177.1.mrna1;Target=FBgn0042177.1 73 245 +
Chr1	stalkie_big_nohaplotig	exon	172415608	172415679	100	-	.	Parent=FBgn0042177.1.mrna1;Target=FBgn0042177.1 1 72 +
Chr1	stalkie_big_nohaplotig	CDS	172407195	172407618	.	-	1	Parent=FBgn0042177.1.mrna1;Target=FBgn0042177.1 2844 3267 +
Chr1	stalkie_big_nohaplotig	CDS	172407691	172407911	.	-	0	Parent=FBgn0042177.1.mrna1;Target=FBgn0042177.1 2623 2843 +
Chr1	stalkie_big_nohaplotig	CDS	172407976	172409107	.	-	1	Parent=FBgn0042177.1.mrna1;Target=FBgn0042177.1 1491 2622 +
Chr1	stalkie_big_nohaplotig	CDS	172410687	172410796	.	-	0	Parent=FBgn0042177.1.mrna1;Target=FBgn0042177.1 1381 1490 +
Chr1	stalkie_big_nohaplotig	CDS	172410866	172411275	.	-	2	Parent=FBgn0042177.1.mrna1;Target=FBgn0042177.1 971 1380 +
Chr1	stalkie_big_nohaplotig	CDS	172411350	172412074	.	-	1	Parent=FBgn0042177.1.mrna1;Target=FBgn0042177.1 246 970 +
Chr1	stalkie_big_nohaplotig	CDS	172412154	172412326	.	-	0	Parent=FBgn0042177.1.mrna1;Target=FBgn0042177.1 73 245 +
Chr1	stalkie_big_nohaplotig	CDS	172415608	172415679	.	-	0	Parent=FBgn0042177.1.mrna1;Target=FBgn0042177.1 1 72 +
Chr1	gffcl	locus	172417564	172423526	.	+	.	ID=RLOC_00013794;geneIDs=FBgn0027500.1.path1;transcripts=FBgn0027500.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172417564	172423526	.	+	.	ID=FBgn0027500.1.mrna1;geneID=FBgn0027500.1.path1;Name=FBgn0027500.1;Dir=sensecoverage=100.0;identity=99.5;matches=3468;mismatches=18;indels=0;unknowns=0;locus=RLOC_00013794
Chr1	stalkie_big_nohaplotig	exon	172417564	172417636	100	+	.	Parent=FBgn0027500.1.mrna1;Target=FBgn0027500.1 1 73 +
Chr1	stalkie_big_nohaplotig	exon	172417702	172417760	100	+	.	Parent=FBgn0027500.1.mrna1;Target=FBgn0027500.1 74 132 +
Chr1	stalkie_big_nohaplotig	exon	172417870	172418011	100	+	.	Parent=FBgn0027500.1.mrna1;Target=FBgn0027500.1 133 274 +
Chr1	stalkie_big_nohaplotig	exon	172418089	172418668	99	+	.	Parent=FBgn0027500.1.mrna1;Target=FBgn0027500.1 275 854 +
Chr1	stalkie_big_nohaplotig	exon	172418960	172419261	100	+	.	Parent=FBgn0027500.1.mrna1;Target=FBgn0027500.1 855 1156 +
Chr1	stalkie_big_nohaplotig	exon	172419327	172419647	99	+	.	Parent=FBgn0027500.1.mrna1;Target=FBgn0027500.1 1157 1477 +
Chr1	stalkie_big_nohaplotig	exon	172419709	172420340	99	+	.	Parent=FBgn0027500.1.mrna1;Target=FBgn0027500.1 1478 2109 +
Chr1	stalkie_big_nohaplotig	exon	172422084	172423406	99	+	.	Parent=FBgn0027500.1.mrna1;Target=FBgn0027500.1 2110 3432 +
Chr1	stalkie_big_nohaplotig	exon	172423473	172423526	100	+	.	Parent=FBgn0027500.1.mrna1;Target=FBgn0027500.1 3433 3486 +
Chr1	stalkie_big_nohaplotig	CDS	172417564	172417636	.	+	0	Parent=FBgn0027500.1.mrna1;Target=FBgn0027500.1 1 73 +
Chr1	stalkie_big_nohaplotig	CDS	172417702	172417760	.	+	2	Parent=FBgn0027500.1.mrna1;Target=FBgn0027500.1 74 132 +
Chr1	stalkie_big_nohaplotig	CDS	172417870	172418011	.	+	0	Parent=FBgn0027500.1.mrna1;Target=FBgn0027500.1 133 274 +
Chr1	stalkie_big_nohaplotig	CDS	172418089	172418668	.	+	2	Parent=FBgn0027500.1.mrna1;Target=FBgn0027500.1 275 854 +
Chr1	stalkie_big_nohaplotig	CDS	172418960	172419261	.	+	1	Parent=FBgn0027500.1.mrna1;Target=FBgn0027500.1 855 1156 +
Chr1	stalkie_big_nohaplotig	CDS	172419327	172419647	.	+	2	Parent=FBgn0027500.1.mrna1;Target=FBgn0027500.1 1157 1477 +
Chr1	stalkie_big_nohaplotig	CDS	172419709	172420340	.	+	2	Parent=FBgn0027500.1.mrna1;Target=FBgn0027500.1 1478 2109 +
Chr1	stalkie_big_nohaplotig	CDS	172422084	172423406	.	+	0	Parent=FBgn0027500.1.mrna1;Target=FBgn0027500.1 2110 3432 +
Chr1	stalkie_big_nohaplotig	CDS	172423473	172423526	.	+	0	Parent=FBgn0027500.1.mrna1;Target=FBgn0027500.1 3433 3486 +
Chr1	gffcl	locus	172429450	172435549	.	-	.	ID=RLOC_00013795;geneIDs=FBgn0041164.1.path1;transcripts=FBgn0041164.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172429450	172435549	.	-	.	ID=FBgn0041164.1.mrna1;geneID=FBgn0041164.1.path1;Name=FBgn0041164.1;Dir=sensecoverage=100.0;identity=99.8;matches=3928;mismatches=8;indels=0;unknowns=0;locus=RLOC_00013795
Chr1	stalkie_big_nohaplotig	exon	172429450	172430184	99	-	.	Parent=FBgn0041164.1.mrna1;Target=FBgn0041164.1 3202 3936 +
Chr1	stalkie_big_nohaplotig	exon	172430247	172430408	100	-	.	Parent=FBgn0041164.1.mrna1;Target=FBgn0041164.1 3040 3201 +
Chr1	stalkie_big_nohaplotig	exon	172430817	172431458	99	-	.	Parent=FBgn0041164.1.mrna1;Target=FBgn0041164.1 2398 3039 +
Chr1	stalkie_big_nohaplotig	exon	172431525	172433081	99	-	.	Parent=FBgn0041164.1.mrna1;Target=FBgn0041164.1 841 2397 +
Chr1	stalkie_big_nohaplotig	exon	172433905	172434333	100	-	.	Parent=FBgn0041164.1.mrna1;Target=FBgn0041164.1 412 840 +
Chr1	stalkie_big_nohaplotig	exon	172434395	172434609	100	-	.	Parent=FBgn0041164.1.mrna1;Target=FBgn0041164.1 197 411 +
Chr1	stalkie_big_nohaplotig	exon	172435354	172435549	99	-	.	Parent=FBgn0041164.1.mrna1;Target=FBgn0041164.1 1 196 +
Chr1	stalkie_big_nohaplotig	CDS	172429450	172430184	.	-	0	Parent=FBgn0041164.1.mrna1;Target=FBgn0041164.1 3202 3936 +
Chr1	stalkie_big_nohaplotig	CDS	172430247	172430408	.	-	0	Parent=FBgn0041164.1.mrna1;Target=FBgn0041164.1 3040 3201 +
Chr1	stalkie_big_nohaplotig	CDS	172430817	172431458	.	-	0	Parent=FBgn0041164.1.mrna1;Target=FBgn0041164.1 2398 3039 +
Chr1	stalkie_big_nohaplotig	CDS	172431525	172433081	.	-	0	Parent=FBgn0041164.1.mrna1;Target=FBgn0041164.1 841 2397 +
Chr1	stalkie_big_nohaplotig	CDS	172433905	172434333	.	-	0	Parent=FBgn0041164.1.mrna1;Target=FBgn0041164.1 412 840 +
Chr1	stalkie_big_nohaplotig	CDS	172434395	172434609	.	-	2	Parent=FBgn0041164.1.mrna1;Target=FBgn0041164.1 197 411 +
Chr1	stalkie_big_nohaplotig	CDS	172435354	172435549	.	-	0	Parent=FBgn0041164.1.mrna1;Target=FBgn0041164.1 1 196 +
Chr1	gffcl	locus	172439626	172561277	.	+	.	ID=RLOC_00013796;geneIDs=FBgn0026259.1.path1;transcripts=FBgn0026259.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172439626	172561277	.	+	.	ID=FBgn0026259.1.mrna1;geneID=FBgn0026259.1.path1;Name=FBgn0026259.1;Dir=sensecoverage=91.9;identity=99.8;matches=2979;mismatches=4;indels=1;unknowns=0;Target=FBgn0026259.1 3 20 +;locus=RLOC_00013796
Chr1	stalkie_big_nohaplotig	exon	172439626	172440729	99	+	.	Parent=FBgn0026259.1.mrna1;Target=FBgn0026259.1 1 1105 +
Chr1	stalkie_big_nohaplotig	exon	172440787	172441733	100	+	.	Parent=FBgn0026259.1.mrna1;Target=FBgn0026259.1 1106 2052 +
Chr1	stalkie_big_nohaplotig	exon	172441805	172442280	100	+	.	Parent=FBgn0026259.1.mrna1;Target=FBgn0026259.1 2053 2528 +
Chr1	stalkie_big_nohaplotig	exon	172442347	172442479	100	+	.	Parent=FBgn0026259.1.mrna1;Target=FBgn0026259.1 2529 2661 +
Chr1	stalkie_big_nohaplotig	exon	172471658	172471662	100	+	.	Parent=FBgn0026259.1.mrna1;Target=FBgn0026259.1 2721 2725 +
Chr1	stalkie_big_nohaplotig	exon	172499169	172499171	100	+	.	Parent=FBgn0026259.1.mrna1;Target=FBgn0026259.1 2726 2728 +
Chr1	stalkie_big_nohaplotig	exon	172531624	172531625	100	+	.	Parent=FBgn0026259.1.mrna1;Target=FBgn0026259.1 2729 2730 +
Chr1	stalkie_big_nohaplotig	exon	172554311	172554318	100	+	.	Parent=FBgn0026259.1.mrna1;Target=FBgn0026259.1 2731 2738 +
Chr1	stalkie_big_nohaplotig	exon	172556694	172556889	100	+	.	Parent=FBgn0026259.1.mrna1;Target=FBgn0026259.1 2739 2934 +
Chr1	stalkie_big_nohaplotig	exon	172561170	172561277	100	+	.	Parent=FBgn0026259.1.mrna1;Target=FBgn0026259.1 2935 3042 +
Chr1	stalkie_big_nohaplotig	CDS	172439628	172439644	.	+	0	Parent=FBgn0026259.1.mrna1
Chr1	gffcl	locus	172509742	172511582	.	+	.	ID=RLOC_00013797;geneIDs=ORF503.path1;transcripts=ORF503.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172509742	172511582	.	+	.	ID=ORF503.mrna1;geneID=ORF503.path1;Name=ORF503;Dir=sensecoverage=100.0;identity=98.9;matches=1697;mismatches=19;indels=0;unknowns=0;locus=RLOC_00013797
Chr1	stalkie_big_nohaplotig	exon	172509742	172510018	97	+	.	Parent=ORF503.mrna1;Target=ORF503 1 277 +
Chr1	stalkie_big_nohaplotig	exon	172510087	172511460	99	+	.	Parent=ORF503.mrna1;Target=ORF503 278 1651 +
Chr1	stalkie_big_nohaplotig	exon	172511518	172511582	100	+	.	Parent=ORF503.mrna1;Target=ORF503 1652 1716 +
Chr1	stalkie_big_nohaplotig	CDS	172509742	172510018	.	+	0	Parent=ORF503.mrna1;Target=ORF503 1 277 +
Chr1	stalkie_big_nohaplotig	CDS	172510087	172511460	.	+	2	Parent=ORF503.mrna1;Target=ORF503 278 1651 +
Chr1	stalkie_big_nohaplotig	CDS	172511518	172511582	.	+	2	Parent=ORF503.mrna1;Target=ORF503 1652 1716 +
Chr1	gffcl	locus	172630445	172631462	.	-	.	ID=RLOC_00013798;geneIDs=comp162356_c1_seq1.path9;transcripts=comp162356_c1_seq1.mrna9
Chr1	stalkie_big_nohaplotig	mRNA	172630445	172631462	.	-	.	ID=comp162356_c1_seq1.mrna9;geneID=comp162356_c1_seq1.path9;Name=comp162356_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1013;mismatches=5;indels=0;unknowns=0;Target=comp162356_c1_seq1 1018 1 .;CDS_Target=comp162356_c1_seq1 1017 1 .;locus=RLOC_00013798
Chr1	stalkie_big_nohaplotig	exon	172630445	172631462	99	-	.	Parent=comp162356_c1_seq1.mrna9
Chr1	stalkie_big_nohaplotig	CDS	172630446	172631462	.	-	0	Parent=comp162356_c1_seq1.mrna9
Chr1	gffcl	locus	172652698	172679314	.	-	.	ID=RLOC_00013799;geneIDs=FBgn0036279.1.path1;transcripts=FBgn0036279.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172652698	172679314	.	-	.	ID=FBgn0036279.1.mrna1;geneID=FBgn0036279.1.path1;Name=FBgn0036279.1;Dir=sensecoverage=100.0;identity=99.8;matches=3486;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013799
Chr1	stalkie_big_nohaplotig	exon	172652698	172652939	99	-	.	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 3251 3492 +
Chr1	stalkie_big_nohaplotig	exon	172653021	172653247	99	-	.	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 3024 3250 +
Chr1	stalkie_big_nohaplotig	exon	172654272	172654501	100	-	.	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 2794 3023 +
Chr1	stalkie_big_nohaplotig	exon	172654616	172654713	100	-	.	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 2696 2793 +
Chr1	stalkie_big_nohaplotig	exon	172661879	172662098	100	-	.	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 2476 2695 +
Chr1	stalkie_big_nohaplotig	exon	172662186	172662296	100	-	.	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 2365 2475 +
Chr1	stalkie_big_nohaplotig	exon	172662403	172662642	99	-	.	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 2125 2364 +
Chr1	stalkie_big_nohaplotig	exon	172662712	172662954	100	-	.	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 1882 2124 +
Chr1	stalkie_big_nohaplotig	exon	172663018	172663153	100	-	.	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 1746 1881 +
Chr1	stalkie_big_nohaplotig	exon	172663215	172663324	100	-	.	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 1636 1745 +
Chr1	stalkie_big_nohaplotig	exon	172663527	172663669	100	-	.	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 1493 1635 +
Chr1	stalkie_big_nohaplotig	exon	172663746	172663911	100	-	.	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 1327 1492 +
Chr1	stalkie_big_nohaplotig	exon	172664126	172664265	100	-	.	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 1187 1326 +
Chr1	stalkie_big_nohaplotig	exon	172664331	172664445	100	-	.	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 1072 1186 +
Chr1	stalkie_big_nohaplotig	exon	172664724	172664977	100	-	.	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 818 1071 +
Chr1	stalkie_big_nohaplotig	exon	172665042	172665300	99	-	.	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 559 817 +
Chr1	stalkie_big_nohaplotig	exon	172669615	172669729	99	-	.	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 444 558 +
Chr1	stalkie_big_nohaplotig	exon	172669801	172669977	100	-	.	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 267 443 +
Chr1	stalkie_big_nohaplotig	exon	172679049	172679314	99	-	.	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 1 266 +
Chr1	stalkie_big_nohaplotig	CDS	172652698	172652939	.	-	2	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 3251 3492 +
Chr1	stalkie_big_nohaplotig	CDS	172653021	172653247	.	-	1	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 3024 3250 +
Chr1	stalkie_big_nohaplotig	CDS	172654272	172654501	.	-	0	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 2794 3023 +
Chr1	stalkie_big_nohaplotig	CDS	172654616	172654713	.	-	2	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 2696 2793 +
Chr1	stalkie_big_nohaplotig	CDS	172661879	172662098	.	-	0	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 2476 2695 +
Chr1	stalkie_big_nohaplotig	CDS	172662186	172662296	.	-	0	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 2365 2475 +
Chr1	stalkie_big_nohaplotig	CDS	172662403	172662642	.	-	0	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 2125 2364 +
Chr1	stalkie_big_nohaplotig	CDS	172662712	172662954	.	-	0	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 1882 2124 +
Chr1	stalkie_big_nohaplotig	CDS	172663018	172663153	.	-	1	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 1746 1881 +
Chr1	stalkie_big_nohaplotig	CDS	172663215	172663324	.	-	0	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 1636 1745 +
Chr1	stalkie_big_nohaplotig	CDS	172663527	172663669	.	-	2	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 1493 1635 +
Chr1	stalkie_big_nohaplotig	CDS	172663746	172663911	.	-	0	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 1327 1492 +
Chr1	stalkie_big_nohaplotig	CDS	172664126	172664265	.	-	2	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 1187 1326 +
Chr1	stalkie_big_nohaplotig	CDS	172664331	172664445	.	-	0	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 1072 1186 +
Chr1	stalkie_big_nohaplotig	CDS	172664724	172664977	.	-	2	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 818 1071 +
Chr1	stalkie_big_nohaplotig	CDS	172665042	172665300	.	-	0	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 559 817 +
Chr1	stalkie_big_nohaplotig	CDS	172669615	172669729	.	-	1	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 444 558 +
Chr1	stalkie_big_nohaplotig	CDS	172669801	172669977	.	-	1	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 267 443 +
Chr1	stalkie_big_nohaplotig	CDS	172679049	172679314	.	-	0	Parent=FBgn0036279.1.mrna1;Target=FBgn0036279.1 1 266 +
Chr1	gffcl	locus	172674740	172675284	.	-	.	ID=RLOC_00013800;geneIDs=comp152732_c1_seq1.path1;transcripts=comp152732_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172674740	172675284	.	-	.	ID=comp152732_c1_seq1.mrna1;geneID=comp152732_c1_seq1.path1;Name=comp152732_c1_seq1;Dir=indeterminatecoverage=99.6;identity=98.9;matches=539;mismatches=6;indels=0;unknowns=0;Target=comp152732_c1_seq1 547 3 .;CDS_Target=comp152732_c1_seq1 405 334 .;locus=RLOC_00013800
Chr1	stalkie_big_nohaplotig	exon	172674740	172675284	98	-	.	Parent=comp152732_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	172674882	172674953	.	-	0	Parent=comp152732_c1_seq1.mrna1
Chr1	gffcl	locus	172682631	172683556	.	-	.	ID=RLOC_00013801;geneIDs=comp149743_c0_seq1.path1;transcripts=comp149743_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172682631	172683556	.	-	.	ID=comp149743_c0_seq1.mrna1;geneID=comp149743_c0_seq1.path1;Name=comp149743_c0_seq1;Dir=indeterminatecoverage=99.2;identity=91.9;matches=856;mismatches=63;indels=12;unknowns=0;Target=comp149743_c0_seq1 931 8 .;CDS_Target=comp149743_c0_seq1 484 398 .;locus=RLOC_00013801
Chr1	stalkie_big_nohaplotig	exon	172682631	172683556	91	-	.	Parent=comp149743_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	172683076	172683162	.	-	0	Parent=comp149743_c0_seq1.mrna1
Chr1	gffcl	locus	172729252	172730300	.	-	.	ID=RLOC_00013802;geneIDs=comp149578_c0_seq1.path1;transcripts=comp149578_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172729252	172730300	.	-	.	ID=comp149578_c0_seq1.mrna1;geneID=comp149578_c0_seq1.path1;Name=comp149578_c0_seq1;Dir=indeterminatecoverage=99.8;identity=94.5;matches=918;mismatches=32;indels=21;unknowns=0;Target=comp149578_c0_seq1 372 199 .;locus=RLOC_00013802
Chr1	stalkie_big_nohaplotig	exon	172729252	172729535	94	-	.	Parent=comp149578_c0_seq1.mrna1;Target=comp149578_c0_seq1 952 678 .
Chr1	stalkie_big_nohaplotig	exon	172729614	172730300	94	-	.	Parent=comp149578_c0_seq1.mrna1;Target=comp149578_c0_seq1 677 3 .
Chr1	stalkie_big_nohaplotig	CDS	172729930	172730103	.	-	0	Parent=comp149578_c0_seq1.mrna1
Chr1	gffcl	locus	172738225	172749724	.	-	.	ID=RLOC_00013803;geneIDs=FBgn0052104.1.path1;transcripts=FBgn0052104.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172738225	172749724	.	-	.	ID=FBgn0052104.1.mrna1;geneID=FBgn0052104.1.path1;Name=FBgn0052104.1;Dir=sensecoverage=100.0;identity=99.1;matches=3676;mismatches=35;indels=0;unknowns=0;locus=RLOC_00013803
Chr1	stalkie_big_nohaplotig	exon	172738225	172738377	99	-	.	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 3559 3711 +
Chr1	stalkie_big_nohaplotig	exon	172738454	172738641	98	-	.	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 3371 3558 +
Chr1	stalkie_big_nohaplotig	exon	172740184	172740414	99	-	.	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 3140 3370 +
Chr1	stalkie_big_nohaplotig	exon	172740477	172740615	99	-	.	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 3001 3139 +
Chr1	stalkie_big_nohaplotig	exon	172741790	172742330	98	-	.	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 2460 3000 +
Chr1	stalkie_big_nohaplotig	exon	172742393	172742544	99	-	.	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 2308 2459 +
Chr1	stalkie_big_nohaplotig	exon	172743876	172744095	100	-	.	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 2088 2307 +
Chr1	stalkie_big_nohaplotig	exon	172745815	172745900	100	-	.	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 2002 2087 +
Chr1	stalkie_big_nohaplotig	exon	172747109	172747272	98	-	.	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 1838 2001 +
Chr1	stalkie_big_nohaplotig	exon	172747331	172747497	99	-	.	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 1671 1837 +
Chr1	stalkie_big_nohaplotig	exon	172747751	172748031	98	-	.	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 1390 1670 +
Chr1	stalkie_big_nohaplotig	exon	172748092	172748302	100	-	.	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 1179 1389 +
Chr1	stalkie_big_nohaplotig	exon	172748367	172748811	99	-	.	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 734 1178 +
Chr1	stalkie_big_nohaplotig	exon	172748871	172749129	98	-	.	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 475 733 +
Chr1	stalkie_big_nohaplotig	exon	172749191	172749525	98	-	.	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 140 474 +
Chr1	stalkie_big_nohaplotig	exon	172749586	172749724	100	-	.	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 1 139 +
Chr1	stalkie_big_nohaplotig	CDS	172738225	172738377	.	-	0	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 3559 3711 +
Chr1	stalkie_big_nohaplotig	CDS	172738454	172738641	.	-	2	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 3371 3558 +
Chr1	stalkie_big_nohaplotig	CDS	172740184	172740414	.	-	2	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 3140 3370 +
Chr1	stalkie_big_nohaplotig	CDS	172740477	172740615	.	-	0	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 3001 3139 +
Chr1	stalkie_big_nohaplotig	CDS	172741790	172742330	.	-	1	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 2460 3000 +
Chr1	stalkie_big_nohaplotig	CDS	172742393	172742544	.	-	0	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 2308 2459 +
Chr1	stalkie_big_nohaplotig	CDS	172743876	172744095	.	-	1	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 2088 2307 +
Chr1	stalkie_big_nohaplotig	CDS	172745815	172745900	.	-	0	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 2002 2087 +
Chr1	stalkie_big_nohaplotig	CDS	172747109	172747272	.	-	2	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 1838 2001 +
Chr1	stalkie_big_nohaplotig	CDS	172747331	172747497	.	-	1	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 1671 1837 +
Chr1	stalkie_big_nohaplotig	CDS	172747751	172748031	.	-	0	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 1390 1670 +
Chr1	stalkie_big_nohaplotig	CDS	172748092	172748302	.	-	1	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 1179 1389 +
Chr1	stalkie_big_nohaplotig	CDS	172748367	172748811	.	-	2	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 734 1178 +
Chr1	stalkie_big_nohaplotig	CDS	172748871	172749129	.	-	0	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 475 733 +
Chr1	stalkie_big_nohaplotig	CDS	172749191	172749525	.	-	2	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 140 474 +
Chr1	stalkie_big_nohaplotig	CDS	172749586	172749724	.	-	0	Parent=FBgn0052104.1.mrna1;Target=FBgn0052104.1 1 139 +
Chr1	gffcl	locus	172750311	172753521	.	+	.	ID=RLOC_00013804;geneIDs=FBgn0034186.1.path1;transcripts=FBgn0034186.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172750311	172753521	.	+	.	ID=FBgn0034186.1.mrna1;geneID=FBgn0034186.1.path1;Name=FBgn0034186.1;Dir=sensecoverage=100.0;identity=99.6;matches=2554;mismatches=11;indels=0;unknowns=0;locus=RLOC_00013804
Chr1	stalkie_big_nohaplotig	exon	172750311	172750985	99	+	.	Parent=FBgn0034186.1.mrna1;Target=FBgn0034186.1 1 675 +
Chr1	stalkie_big_nohaplotig	exon	172751048	172752097	99	+	.	Parent=FBgn0034186.1.mrna1;Target=FBgn0034186.1 676 1725 +
Chr1	stalkie_big_nohaplotig	exon	172752682	172753521	99	+	.	Parent=FBgn0034186.1.mrna1;Target=FBgn0034186.1 1726 2565 +
Chr1	stalkie_big_nohaplotig	CDS	172750311	172750985	.	+	0	Parent=FBgn0034186.1.mrna1;Target=FBgn0034186.1 1 675 +
Chr1	stalkie_big_nohaplotig	CDS	172751048	172752097	.	+	0	Parent=FBgn0034186.1.mrna1;Target=FBgn0034186.1 676 1725 +
Chr1	stalkie_big_nohaplotig	CDS	172752682	172753521	.	+	0	Parent=FBgn0034186.1.mrna1;Target=FBgn0034186.1 1726 2565 +
Chr1	gffcl	locus	172760758	172764941	.	-	.	ID=RLOC_00013806;geneIDs=FBgn0036282.1.path1;transcripts=FBgn0036282.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172760758	172764941	.	-	.	ID=FBgn0036282.1.mrna1;geneID=FBgn0036282.1.path1;Name=FBgn0036282.1;Dir=sensecoverage=100.0;identity=99.3;matches=1963;mismatches=14;indels=0;unknowns=0;locus=RLOC_00013806
Chr1	stalkie_big_nohaplotig	exon	172760758	172761064	99	-	.	Parent=FBgn0036282.1.mrna1;Target=FBgn0036282.1 1671 1977 +
Chr1	stalkie_big_nohaplotig	exon	172761131	172761767	99	-	.	Parent=FBgn0036282.1.mrna1;Target=FBgn0036282.1 1034 1670 +
Chr1	stalkie_big_nohaplotig	exon	172761832	172761953	100	-	.	Parent=FBgn0036282.1.mrna1;Target=FBgn0036282.1 912 1033 +
Chr1	stalkie_big_nohaplotig	exon	172763054	172763393	98	-	.	Parent=FBgn0036282.1.mrna1;Target=FBgn0036282.1 572 911 +
Chr1	stalkie_big_nohaplotig	exon	172763458	172763640	99	-	.	Parent=FBgn0036282.1.mrna1;Target=FBgn0036282.1 389 571 +
Chr1	stalkie_big_nohaplotig	exon	172764554	172764941	99	-	.	Parent=FBgn0036282.1.mrna1;Target=FBgn0036282.1 1 388 +
Chr1	stalkie_big_nohaplotig	CDS	172760758	172761064	.	-	1	Parent=FBgn0036282.1.mrna1;Target=FBgn0036282.1 1671 1977 +
Chr1	stalkie_big_nohaplotig	CDS	172761131	172761767	.	-	2	Parent=FBgn0036282.1.mrna1;Target=FBgn0036282.1 1034 1670 +
Chr1	stalkie_big_nohaplotig	CDS	172761832	172761953	.	-	1	Parent=FBgn0036282.1.mrna1;Target=FBgn0036282.1 912 1033 +
Chr1	stalkie_big_nohaplotig	CDS	172763054	172763393	.	-	2	Parent=FBgn0036282.1.mrna1;Target=FBgn0036282.1 572 911 +
Chr1	stalkie_big_nohaplotig	CDS	172763458	172763640	.	-	2	Parent=FBgn0036282.1.mrna1;Target=FBgn0036282.1 389 571 +
Chr1	stalkie_big_nohaplotig	CDS	172764554	172764941	.	-	0	Parent=FBgn0036282.1.mrna1;Target=FBgn0036282.1 1 388 +
Chr1	gffcl	locus	172767609	172768269	.	-	.	ID=RLOC_00013807;geneIDs=comp149977_c0_seq1.path1;transcripts=comp149977_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172767609	172768269	.	-	.	ID=comp149977_c0_seq1.mrna1;geneID=comp149977_c0_seq1.path1;Name=comp149977_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=643;mismatches=18;indels=1;unknowns=0;Target=comp149977_c0_seq1 662 1 .;CDS_Target=comp149977_c0_seq1 60 1 .;locus=RLOC_00013807
Chr1	stalkie_big_nohaplotig	exon	172767609	172768269	97	-	.	Parent=comp149977_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	172768210	172768269	.	-	0	Parent=comp149977_c0_seq1.mrna1
Chr1	gffcl	locus	172769743	173173028	.	-	.	ID=RLOC_00013808;geneIDs=FBgn0035251.1.path1,FBgn0052103.1.path1;transcripts=FBgn0052103.1.mrna1,FBgn0035251.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172769743	173173028	.	-	.	ID=FBgn0052103.1.mrna1;geneID=FBgn0052103.1.path1;Name=FBgn0052103.1;Dir=sensecoverage=85.4;identity=97.2;matches=1144;mismatches=19;indels=14;unknowns=0;locus=RLOC_00013808
Chr1	stalkie_big_nohaplotig	exon	172769743	172769966	100	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 1583 1806 +
Chr1	stalkie_big_nohaplotig	exon	172770757	172771324	100	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 1015 1582 +
Chr1	stalkie_big_nohaplotig	exon	172771402	172771560	100	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 856 1014 +
Chr1	stalkie_big_nohaplotig	exon	172778727	172778736	83	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 844 855 +
Chr1	stalkie_big_nohaplotig	exon	172819457	172819464	100	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 836 843 +
Chr1	stalkie_big_nohaplotig	exon	172830931	172830932	100	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 834 835 +
Chr1	stalkie_big_nohaplotig	exon	172837469	172837519	57	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 774 833 +
Chr1	stalkie_big_nohaplotig	exon	172847870	172847876	100	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 767 773 +
Chr1	stalkie_big_nohaplotig	exon	172851966	172851978	84	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 754 766 +
Chr1	stalkie_big_nohaplotig	exon	172860526	172860535	100	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 744 753 +
Chr1	stalkie_big_nohaplotig	exon	172860647	172860652	100	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 738 743 +
Chr1	stalkie_big_nohaplotig	exon	172866022	172866026	100	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 733 737 +
Chr1	stalkie_big_nohaplotig	exon	172866085	172866097	92	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 720 732 +
Chr1	stalkie_big_nohaplotig	exon	172891553	172891562	100	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 710 719 +
Chr1	stalkie_big_nohaplotig	exon	172908635	172908637	100	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 707 709 +
Chr1	stalkie_big_nohaplotig	exon	172913977	172913982	83	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 701 706 +
Chr1	stalkie_big_nohaplotig	exon	172918044	172918046	75	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 697 700 +
Chr1	stalkie_big_nohaplotig	exon	172928825	172928836	100	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 549 560 +
Chr1	stalkie_big_nohaplotig	exon	172951797	172951803	100	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 542 548 +
Chr1	stalkie_big_nohaplotig	exon	172954718	172954723	100	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 536 541 +
Chr1	stalkie_big_nohaplotig	exon	173160144	173160155	100	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 350 361 +
Chr1	stalkie_big_nohaplotig	exon	173167371	173167380	100	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 340 349 +
Chr1	stalkie_big_nohaplotig	exon	173172456	173172458	100	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 337 339 +
Chr1	stalkie_big_nohaplotig	exon	173172470	173172478	100	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 271 279 +
Chr1	stalkie_big_nohaplotig	exon	173173023	173173028	100	-	.	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 265 270 +
Chr1	stalkie_big_nohaplotig	CDS	172769743	172769966	.	-	2	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 1583 1806 +
Chr1	stalkie_big_nohaplotig	CDS	172770757	172771324	.	-	0	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 1015 1582 +
Chr1	stalkie_big_nohaplotig	CDS	172771402	172771506	.	-	0	Parent=FBgn0052103.1.mrna1;Target=FBgn0052103.1 910 1014 +
Chr1	stalkie_big_nohaplotig	mRNA	172851696	172852443	.	-	.	ID=FBgn0035251.1.mrna1;geneID=FBgn0035251.1.path1;Name=FBgn0035251.1;Dir=sensecoverage=100.0;identity=99.5;matches=630;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013808
Chr1	stalkie_big_nohaplotig	exon	172851696	172851918	99	-	.	Parent=FBgn0035251.1.mrna1;Target=FBgn0035251.1 411 633 +
Chr1	stalkie_big_nohaplotig	exon	172851976	172852126	99	-	.	Parent=FBgn0035251.1.mrna1;Target=FBgn0035251.1 260 410 +
Chr1	stalkie_big_nohaplotig	exon	172852185	172852443	100	-	.	Parent=FBgn0035251.1.mrna1;Target=FBgn0035251.1 1 259 +
Chr1	stalkie_big_nohaplotig	CDS	172851696	172851918	.	-	1	Parent=FBgn0035251.1.mrna1;Target=FBgn0035251.1 411 633 +
Chr1	stalkie_big_nohaplotig	CDS	172851976	172852126	.	-	2	Parent=FBgn0035251.1.mrna1;Target=FBgn0035251.1 260 410 +
Chr1	stalkie_big_nohaplotig	CDS	172852185	172852443	.	-	0	Parent=FBgn0035251.1.mrna1;Target=FBgn0035251.1 1 259 +
Chr1	gffcl	locus	172796222	172797369	.	+	.	ID=RLOC_00013809;geneIDs=comp159561_c0_seq1.path1;transcripts=comp159561_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172796222	172797369	.	+	.	ID=comp159561_c0_seq1.mrna1;geneID=comp159561_c0_seq1.path1;Name=comp159561_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1141;mismatches=7;indels=1;unknowns=0;Target=comp159561_c0_seq1 1149 1 .;CDS_Target=comp159561_c0_seq1 1024 851 .;locus=RLOC_00013809
Chr1	stalkie_big_nohaplotig	exon	172796222	172797369	99	+	.	Parent=comp159561_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	172797072	172797245	.	+	0	Parent=comp159561_c0_seq1.mrna1
Chr1	gffcl	locus	172797824	172798872	.	-	.	ID=RLOC_00013810;geneIDs=FBgn0020655.1.path1;transcripts=FBgn0020655.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172797824	172798872	.	-	.	ID=FBgn0020655.1.mrna1;geneID=FBgn0020655.1.path1;Name=FBgn0020655.1;Dir=sensecoverage=59.6;identity=99.6;matches=841;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013810
Chr1	stalkie_big_nohaplotig	exon	172797824	172797917	98	-	.	Parent=FBgn0020655.1.mrna1;Target=FBgn0020655.1 751 844 +
Chr1	stalkie_big_nohaplotig	exon	172797979	172798093	100	-	.	Parent=FBgn0020655.1.mrna1;Target=FBgn0020655.1 636 750 +
Chr1	stalkie_big_nohaplotig	exon	172798171	172798739	99	-	.	Parent=FBgn0020655.1.mrna1;Target=FBgn0020655.1 67 635 +
Chr1	stalkie_big_nohaplotig	exon	172798807	172798872	100	-	.	Parent=FBgn0020655.1.mrna1;Target=FBgn0020655.1 1 66 +
Chr1	stalkie_big_nohaplotig	CDS	172797825	172797917	.	-	0	Parent=FBgn0020655.1.mrna1;Target=FBgn0020655.1 751 843 +
Chr1	stalkie_big_nohaplotig	CDS	172797979	172798093	.	-	1	Parent=FBgn0020655.1.mrna1;Target=FBgn0020655.1 636 750 +
Chr1	stalkie_big_nohaplotig	CDS	172798171	172798739	.	-	0	Parent=FBgn0020655.1.mrna1;Target=FBgn0020655.1 67 635 +
Chr1	stalkie_big_nohaplotig	CDS	172798807	172798872	.	-	0	Parent=FBgn0020655.1.mrna1;Target=FBgn0020655.1 1 66 +
Chr1	gffcl	locus	172800935	172801895	.	+	.	ID=RLOC_00013811;geneIDs=FBgn0037046.1.path1;transcripts=FBgn0037046.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172800935	172801895	.	+	.	ID=FBgn0037046.1.mrna1;geneID=FBgn0037046.1.path1;Name=FBgn0037046.1;Dir=sensecoverage=100.0;identity=99.5;matches=639;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013811
Chr1	stalkie_big_nohaplotig	exon	172800935	172801064	98	+	.	Parent=FBgn0037046.1.mrna1;Target=FBgn0037046.1 1 130 +
Chr1	stalkie_big_nohaplotig	exon	172801314	172801476	99	+	.	Parent=FBgn0037046.1.mrna1;Target=FBgn0037046.1 131 293 +
Chr1	stalkie_big_nohaplotig	exon	172801547	172801895	100	+	.	Parent=FBgn0037046.1.mrna1;Target=FBgn0037046.1 294 642 +
Chr1	stalkie_big_nohaplotig	CDS	172800935	172801064	.	+	0	Parent=FBgn0037046.1.mrna1;Target=FBgn0037046.1 1 130 +
Chr1	stalkie_big_nohaplotig	CDS	172801314	172801476	.	+	2	Parent=FBgn0037046.1.mrna1;Target=FBgn0037046.1 131 293 +
Chr1	stalkie_big_nohaplotig	CDS	172801547	172801895	.	+	1	Parent=FBgn0037046.1.mrna1;Target=FBgn0037046.1 294 642 +
Chr1	gffcl	locus	172815234	172815944	.	-	.	ID=RLOC_00013812;geneIDs=FBgn0032101.2.path1;transcripts=FBgn0032101.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172815234	172815944	.	-	.	ID=FBgn0032101.2.mrna1;geneID=FBgn0032101.2.path1;Name=FBgn0032101.2;Dir=indeterminatecoverage=100.0;identity=99.7;matches=709;mismatches=2;indels=0;unknowns=0;Target=FBgn0032101.2 711 1 .;locus=RLOC_00013812
Chr1	stalkie_big_nohaplotig	exon	172815234	172815944	99	-	.	Parent=FBgn0032101.2.mrna1
Chr1	stalkie_big_nohaplotig	CDS	172815234	172815944	.	-	0	Parent=FBgn0032101.2.mrna1
Chr1	gffcl	locus	172820690	172835175	.	+	.	ID=RLOC_00013813;geneIDs=FBgn0035604.path1;transcripts=FBgn0035604.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172820690	172835175	.	+	.	ID=FBgn0035604.mrna1;geneID=FBgn0035604.path1;Name=FBgn0035604;Dir=sensecoverage=100.0;identity=99.6;matches=1118;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013813
Chr1	stalkie_big_nohaplotig	exon	172820690	172820720	100	+	.	Parent=FBgn0035604.mrna1;Target=FBgn0035604 1 31 +
Chr1	stalkie_big_nohaplotig	exon	172823478	172823720	100	+	.	Parent=FBgn0035604.mrna1;Target=FBgn0035604 32 274 +
Chr1	stalkie_big_nohaplotig	exon	172825360	172825571	100	+	.	Parent=FBgn0035604.mrna1;Target=FBgn0035604 275 486 +
Chr1	stalkie_big_nohaplotig	exon	172825643	172825892	100	+	.	Parent=FBgn0035604.mrna1;Target=FBgn0035604 487 736 +
Chr1	stalkie_big_nohaplotig	exon	172829742	172829904	98	+	.	Parent=FBgn0035604.mrna1;Target=FBgn0035604 737 899 +
Chr1	stalkie_big_nohaplotig	exon	172834334	172834436	98	+	.	Parent=FBgn0035604.mrna1;Target=FBgn0035604 900 1002 +
Chr1	stalkie_big_nohaplotig	exon	172835056	172835175	100	+	.	Parent=FBgn0035604.mrna1;Target=FBgn0035604 1003 1122 +
Chr1	stalkie_big_nohaplotig	CDS	172820690	172820720	.	+	0	Parent=FBgn0035604.mrna1;Target=FBgn0035604 1 31 +
Chr1	stalkie_big_nohaplotig	CDS	172823478	172823720	.	+	2	Parent=FBgn0035604.mrna1;Target=FBgn0035604 32 274 +
Chr1	stalkie_big_nohaplotig	CDS	172825360	172825571	.	+	2	Parent=FBgn0035604.mrna1;Target=FBgn0035604 275 486 +
Chr1	stalkie_big_nohaplotig	CDS	172825643	172825892	.	+	0	Parent=FBgn0035604.mrna1;Target=FBgn0035604 487 736 +
Chr1	stalkie_big_nohaplotig	CDS	172829742	172829904	.	+	2	Parent=FBgn0035604.mrna1;Target=FBgn0035604 737 899 +
Chr1	stalkie_big_nohaplotig	CDS	172834334	172834436	.	+	1	Parent=FBgn0035604.mrna1;Target=FBgn0035604 900 1002 +
Chr1	stalkie_big_nohaplotig	CDS	172835056	172835175	.	+	0	Parent=FBgn0035604.mrna1;Target=FBgn0035604 1003 1122 +
Chr1	gffcl	locus	172853707	172856111	.	+	.	ID=RLOC_00013814;geneIDs=comp119719_c0_seq1.path1;transcripts=comp119719_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172853707	172856111	.	+	.	ID=comp119719_c0_seq1.mrna1;geneID=comp119719_c0_seq1.path1;Name=comp119719_c0_seq1;Dir=sensecoverage=96.6;identity=99.0;matches=818;mismatches=8;indels=0;unknowns=0;Target=comp119719_c0_seq1 19 141 +;locus=RLOC_00013814
Chr1	stalkie_big_nohaplotig	exon	172853707	172853866	97	+	.	Parent=comp119719_c0_seq1.mrna1;Target=comp119719_c0_seq1 19 178 +
Chr1	stalkie_big_nohaplotig	exon	172853955	172854281	98	+	.	Parent=comp119719_c0_seq1.mrna1;Target=comp119719_c0_seq1 179 505 +
Chr1	stalkie_big_nohaplotig	exon	172855773	172856111	100	+	.	Parent=comp119719_c0_seq1.mrna1;Target=comp119719_c0_seq1 506 844 +
Chr1	stalkie_big_nohaplotig	CDS	172853707	172853829	.	+	0	Parent=comp119719_c0_seq1.mrna1
Chr1	gffcl	locus	172925878	172949603	.	-	.	ID=RLOC_00013815;geneIDs=comp140155_c0_seq1.path1;transcripts=comp140155_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	172925878	172949603	.	-	.	ID=comp140155_c0_seq1.mrna1;geneID=comp140155_c0_seq1.path1;Name=comp140155_c0_seq1;Dir=indeterminatecoverage=92.9;identity=98.7;matches=1065;mismatches=11;indels=3;unknowns=0;Target=comp140155_c0_seq1 999 688 .;locus=RLOC_00013815
Chr1	stalkie_big_nohaplotig	exon	172925878	172925889	75	-	.	Parent=comp140155_c0_seq1.mrna1;Target=comp140155_c0_seq1 1076 1065 .
Chr1	stalkie_big_nohaplotig	exon	172930140	172930147	100	-	.	Parent=comp140155_c0_seq1.mrna1;Target=comp140155_c0_seq1 1064 1057 .
Chr1	stalkie_big_nohaplotig	exon	172944813	172944818	100	-	.	Parent=comp140155_c0_seq1.mrna1;Target=comp140155_c0_seq1 1056 1051 .
Chr1	stalkie_big_nohaplotig	exon	172948551	172949603	98	-	.	Parent=comp140155_c0_seq1.mrna1;Target=comp140155_c0_seq1 1050 1 .
Chr1	stalkie_big_nohaplotig	CDS	172948602	172948913	.	-	0	Parent=comp140155_c0_seq1.mrna1
Chr1	gffcl	locus	173006004	173006545	.	+	.	ID=RLOC_00013816;geneIDs=comp154952_c0_seq1.path6;transcripts=comp154952_c0_seq1.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	173006004	173006545	.	+	.	ID=comp154952_c0_seq1.mrna6;geneID=comp154952_c0_seq1.path6;Name=comp154952_c0_seq1;Dir=indeterminatecoverage=91.6;identity=99.3;matches=538;mismatches=4;indels=0;unknowns=0;Target=comp154952_c0_seq1 560 19 .;CDS_Target=comp154952_c0_seq1 497 390 .;locus=RLOC_00013816
Chr1	stalkie_big_nohaplotig	exon	173006004	173006545	99	+	.	Parent=comp154952_c0_seq1.mrna6
Chr1	stalkie_big_nohaplotig	CDS	173006375	173006482	.	+	0	Parent=comp154952_c0_seq1.mrna6
Chr1	gffcl	locus	173044921	173047054	.	+	.	ID=RLOC_00013817;geneIDs=FBgn0261562.2.path2;transcripts=FBgn0261562.2.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	173044921	173047054	.	+	.	ID=FBgn0261562.2.mrna2;geneID=FBgn0261562.2.path2;Name=FBgn0261562.2;Dir=sensecoverage=99.7;identity=98.1;matches=1089;mismatches=21;indels=0;unknowns=0;locus=RLOC_00013817
Chr1	stalkie_big_nohaplotig	exon	173044921	173045062	99	+	.	Parent=FBgn0261562.2.mrna2;Target=FBgn0261562.2 4 145 +
Chr1	stalkie_big_nohaplotig	exon	173045342	173045476	99	+	.	Parent=FBgn0261562.2.mrna2;Target=FBgn0261562.2 146 280 +
Chr1	stalkie_big_nohaplotig	exon	173045565	173046080	96	+	.	Parent=FBgn0261562.2.mrna2;Target=FBgn0261562.2 281 796 +
Chr1	stalkie_big_nohaplotig	exon	173046675	173046777	98	+	.	Parent=FBgn0261562.2.mrna2;Target=FBgn0261562.2 797 899 +
Chr1	stalkie_big_nohaplotig	exon	173046841	173047054	99	+	.	Parent=FBgn0261562.2.mrna2;Target=FBgn0261562.2 900 1113 +
Chr1	stalkie_big_nohaplotig	CDS	173044921	173045062	.	+	0	Parent=FBgn0261562.2.mrna2;Target=FBgn0261562.2 4 145 +
Chr1	stalkie_big_nohaplotig	CDS	173045342	173045476	.	+	2	Parent=FBgn0261562.2.mrna2;Target=FBgn0261562.2 146 280 +
Chr1	stalkie_big_nohaplotig	CDS	173045565	173046080	.	+	2	Parent=FBgn0261562.2.mrna2;Target=FBgn0261562.2 281 796 +
Chr1	stalkie_big_nohaplotig	CDS	173046675	173046777	.	+	2	Parent=FBgn0261562.2.mrna2;Target=FBgn0261562.2 797 899 +
Chr1	stalkie_big_nohaplotig	CDS	173046841	173047054	.	+	1	Parent=FBgn0261562.2.mrna2;Target=FBgn0261562.2 900 1113 +
Chr1	gffcl	locus	173049564	173053719	.	+	.	ID=RLOC_00013818;geneIDs=FBgn0261562.1.path1;transcripts=FBgn0261562.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173049564	173053719	.	+	.	ID=FBgn0261562.1.mrna1;geneID=FBgn0261562.1.path1;Name=FBgn0261562.1;Dir=sensecoverage=99.8;identity=99.8;matches=1228;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013818
Chr1	stalkie_big_nohaplotig	exon	173049564	173049705	100	+	.	Parent=FBgn0261562.1.mrna1;Target=FBgn0261562.1 4 145 +
Chr1	stalkie_big_nohaplotig	exon	173049984	173050118	99	+	.	Parent=FBgn0261562.1.mrna1;Target=FBgn0261562.1 146 280 +
Chr1	stalkie_big_nohaplotig	exon	173050480	173051031	100	+	.	Parent=FBgn0261562.1.mrna1;Target=FBgn0261562.1 281 832 +
Chr1	stalkie_big_nohaplotig	exon	173051085	173051266	100	+	.	Parent=FBgn0261562.1.mrna1;Target=FBgn0261562.1 833 1014 +
Chr1	stalkie_big_nohaplotig	exon	173053501	173053719	99	+	.	Parent=FBgn0261562.1.mrna1;Target=FBgn0261562.1 1015 1233 +
Chr1	stalkie_big_nohaplotig	CDS	173049564	173049705	.	+	0	Parent=FBgn0261562.1.mrna1;Target=FBgn0261562.1 4 145 +
Chr1	stalkie_big_nohaplotig	CDS	173049984	173050118	.	+	2	Parent=FBgn0261562.1.mrna1;Target=FBgn0261562.1 146 280 +
Chr1	stalkie_big_nohaplotig	CDS	173050480	173051031	.	+	2	Parent=FBgn0261562.1.mrna1;Target=FBgn0261562.1 281 832 +
Chr1	stalkie_big_nohaplotig	CDS	173051085	173051266	.	+	2	Parent=FBgn0261562.1.mrna1;Target=FBgn0261562.1 833 1014 +
Chr1	stalkie_big_nohaplotig	CDS	173053501	173053719	.	+	0	Parent=FBgn0261562.1.mrna1;Target=FBgn0261562.1 1015 1233 +
Chr1	gffcl	locus	173055612	173055876	.	+	.	ID=RLOC_00013819;geneIDs=comp51254_c0_seq1.path1;transcripts=comp51254_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173055612	173055876	.	+	.	ID=comp51254_c0_seq1.mrna1;geneID=comp51254_c0_seq1.path1;Name=comp51254_c0_seq1;Dir=indeterminatecoverage=93.6;identity=99.6;matches=264;mismatches=1;indels=0;unknowns=0;Target=comp51254_c0_seq1 281 17 .;CDS_Target=comp51254_c0_seq1 279 187 .;locus=RLOC_00013819
Chr1	stalkie_big_nohaplotig	exon	173055612	173055876	99	+	.	Parent=comp51254_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	173055782	173055874	.	+	0	Parent=comp51254_c0_seq1.mrna1
Chr1	gffcl	locus	173058167	173059235	.	-	.	ID=RLOC_00013820;geneIDs=Dp_FBgn0244739.path3;transcripts=Dp_FBgn0244739.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	173058167	173059235	.	-	.	ID=Dp_FBgn0244739.mrna3;geneID=Dp_FBgn0244739.path3;Name=Dp_FBgn0244739;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1059;mismatches=9;indels=1;unknowns=0;Target=Dp_FBgn0244739 1068 1 .;CDS_Target=Dp_FBgn0244739 148 2 .;locus=RLOC_00013820
Chr1	stalkie_big_nohaplotig	exon	173058167	173059235	99	-	.	Parent=Dp_FBgn0244739.mrna3
Chr1	stalkie_big_nohaplotig	CDS	173059087	173059234	.	-	0	Parent=Dp_FBgn0244739.mrna3
Chr1	gffcl	locus	173060791	173061138	.	+	.	ID=RLOC_00013821;geneIDs=comp118122_c0_seq1.path1;transcripts=comp118122_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173060791	173061138	.	+	.	ID=comp118122_c0_seq1.mrna1;geneID=comp118122_c0_seq1.path1;Name=comp118122_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=348;mismatches=0;indels=0;unknowns=0;Target=comp118122_c0_seq1 348 1 .;CDS_Target=comp118122_c0_seq1 69 1 .;locus=RLOC_00013821
Chr1	stalkie_big_nohaplotig	exon	173060791	173061138	100	+	.	Parent=comp118122_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	173060791	173060859	.	+	0	Parent=comp118122_c0_seq1.mrna1
Chr1	gffcl	locus	173061211	173062230	.	+	.	ID=RLOC_00013822;geneIDs=comp159731_c0_seq1.path1;transcripts=comp159731_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173061211	173062230	.	+	.	ID=comp159731_c0_seq1.mrna1;geneID=comp159731_c0_seq1.path1;Name=comp159731_c0_seq1;Dir=indeterminatecoverage=98.9;identity=98.0;matches=1008;mismatches=12;indels=9;unknowns=0;Target=comp159731_c0_seq1 1029 1 .;CDS_Target=comp159731_c0_seq1 110 3 .;locus=RLOC_00013822
Chr1	stalkie_big_nohaplotig	exon	173061211	173062230	97	+	.	Parent=comp159731_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	173061213	173061320	.	+	0	Parent=comp159731_c0_seq1.mrna1
Chr1	gffcl	locus	173065528	173665102	.	-	.	ID=RLOC_00013823;geneIDs=FBgn0260941.1.path1;transcripts=FBgn0260941.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173065528	173665102	.	-	.	ID=FBgn0260941.1.mrna1;geneID=FBgn0260941.1.path1;Name=FBgn0260941.1;Dir=sensecoverage=100.0;identity=99.6;matches=2204;mismatches=9;indels=0;unknowns=0;locus=RLOC_00013823
Chr1	stalkie_big_nohaplotig	exon	173065528	173066558	99	-	.	Parent=FBgn0260941.1.mrna1;Target=FBgn0260941.1 1223 2253 +
Chr1	stalkie_big_nohaplotig	exon	173647614	173647693	100	-	.	Parent=FBgn0260941.1.mrna1;Target=FBgn0260941.1 1102 1181 +
Chr1	stalkie_big_nohaplotig	exon	173647965	173648142	100	-	.	Parent=FBgn0260941.1.mrna1;Target=FBgn0260941.1 924 1101 +
Chr1	stalkie_big_nohaplotig	exon	173648238	173648359	100	-	.	Parent=FBgn0260941.1.mrna1;Target=FBgn0260941.1 802 923 +
Chr1	stalkie_big_nohaplotig	exon	173648428	173648582	100	-	.	Parent=FBgn0260941.1.mrna1;Target=FBgn0260941.1 647 801 +
Chr1	stalkie_big_nohaplotig	exon	173650380	173650491	100	-	.	Parent=FBgn0260941.1.mrna1;Target=FBgn0260941.1 535 646 +
Chr1	stalkie_big_nohaplotig	exon	173654229	173654413	100	-	.	Parent=FBgn0260941.1.mrna1;Target=FBgn0260941.1 350 534 +
Chr1	stalkie_big_nohaplotig	exon	173654754	173654914	100	-	.	Parent=FBgn0260941.1.mrna1;Target=FBgn0260941.1 189 349 +
Chr1	stalkie_big_nohaplotig	exon	173664915	173665102	100	-	.	Parent=FBgn0260941.1.mrna1;Target=FBgn0260941.1 1 188 +
Chr1	stalkie_big_nohaplotig	CDS	173065528	173066558	.	-	1	Parent=FBgn0260941.1.mrna1;Target=FBgn0260941.1 1223 2253 +
Chr1	stalkie_big_nohaplotig	CDS	173647614	173647693	.	-	0	Parent=FBgn0260941.1.mrna1;Target=FBgn0260941.1 1102 1181 +
Chr1	stalkie_big_nohaplotig	CDS	173647965	173648142	.	-	1	Parent=FBgn0260941.1.mrna1;Target=FBgn0260941.1 924 1101 +
Chr1	stalkie_big_nohaplotig	CDS	173648238	173648359	.	-	0	Parent=FBgn0260941.1.mrna1;Target=FBgn0260941.1 802 923 +
Chr1	stalkie_big_nohaplotig	CDS	173648428	173648582	.	-	2	Parent=FBgn0260941.1.mrna1;Target=FBgn0260941.1 647 801 +
Chr1	stalkie_big_nohaplotig	CDS	173650380	173650491	.	-	0	Parent=FBgn0260941.1.mrna1;Target=FBgn0260941.1 535 646 +
Chr1	stalkie_big_nohaplotig	CDS	173654229	173654413	.	-	2	Parent=FBgn0260941.1.mrna1;Target=FBgn0260941.1 350 534 +
Chr1	stalkie_big_nohaplotig	CDS	173654754	173654914	.	-	1	Parent=FBgn0260941.1.mrna1;Target=FBgn0260941.1 189 349 +
Chr1	stalkie_big_nohaplotig	CDS	173664915	173665102	.	-	0	Parent=FBgn0260941.1.mrna1;Target=FBgn0260941.1 1 188 +
Chr1	gffcl	locus	173072647	173072835	.	+	.	ID=RLOC_00013824;geneIDs=comp146331_c0_seq1.path1;transcripts=comp146331_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173072647	173072835	.	+	.	ID=comp146331_c0_seq1.mrna1;geneID=comp146331_c0_seq1.path1;Name=comp146331_c0_seq1;Dir=indeterminatecoverage=54.5;identity=96.8;matches=183;mismatches=5;indels=1;unknowns=0;Target=comp146331_c0_seq1 345 158 .;CDS_Target=comp146331_c0_seq1 308 159 .;locus=RLOC_00013824
Chr1	stalkie_big_nohaplotig	exon	173072647	173072835	96	+	.	Parent=comp146331_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	173072648	173072798	.	+	0	Parent=comp146331_c0_seq1.mrna1
Chr1	gffcl	locus	173093236	173395431	.	+	.	ID=RLOC_00013825;geneIDs=comp152226_c0_seq1.path1,comp163394_c3_seq1.path1;transcripts=comp152226_c0_seq1.mrna1,comp163394_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173093236	173395431	.	+	.	ID=comp152226_c0_seq1.mrna1;geneID=comp152226_c0_seq1.path1;Name=comp152226_c0_seq1;Dir=indeterminatecoverage=83.4;identity=99.6;matches=968;mismatches=4;indels=0;unknowns=0;Target=comp152226_c0_seq1 1163 993 .;locus=RLOC_00013825
Chr1	stalkie_big_nohaplotig	exon	173093236	173093237	100	+	.	Parent=comp152226_c0_seq1.mrna1;Target=comp152226_c0_seq1 193 192 .
Chr1	stalkie_big_nohaplotig	exon	173093433	173093435	100	+	.	Parent=comp152226_c0_seq1.mrna1;Target=comp152226_c0_seq1 196 194 .
Chr1	stalkie_big_nohaplotig	exon	173099916	173099925	100	+	.	Parent=comp152226_c0_seq1.mrna1;Target=comp152226_c0_seq1 206 197 .
Chr1	stalkie_big_nohaplotig	exon	173106453	173106455	100	+	.	Parent=comp152226_c0_seq1.mrna1;Target=comp152226_c0_seq1 209 207 .
Chr1	stalkie_big_nohaplotig	exon	173108454	173108455	100	+	.	Parent=comp152226_c0_seq1.mrna1;Target=comp152226_c0_seq1 211 210 .
Chr1	stalkie_big_nohaplotig	exon	173121298	173121304	100	+	.	Parent=comp152226_c0_seq1.mrna1;Target=comp152226_c0_seq1 218 212 .
Chr1	stalkie_big_nohaplotig	exon	173133643	173133644	100	+	.	Parent=comp152226_c0_seq1.mrna1;Target=comp152226_c0_seq1 220 219 .
Chr1	stalkie_big_nohaplotig	exon	173140187	173140191	100	+	.	Parent=comp152226_c0_seq1.mrna1;Target=comp152226_c0_seq1 225 221 .
Chr1	stalkie_big_nohaplotig	exon	173144065	173144066	100	+	.	Parent=comp152226_c0_seq1.mrna1;Target=comp152226_c0_seq1 227 226 .
Chr1	stalkie_big_nohaplotig	exon	173155062	173155065	100	+	.	Parent=comp152226_c0_seq1.mrna1;Target=comp152226_c0_seq1 231 228 .
Chr1	stalkie_big_nohaplotig	exon	173163202	173163205	100	+	.	Parent=comp152226_c0_seq1.mrna1;Target=comp152226_c0_seq1 235 232 .
Chr1	stalkie_big_nohaplotig	exon	173168515	173168524	100	+	.	Parent=comp152226_c0_seq1.mrna1;Target=comp152226_c0_seq1 245 236 .
Chr1	stalkie_big_nohaplotig	exon	173169888	173169890	100	+	.	Parent=comp152226_c0_seq1.mrna1;Target=comp152226_c0_seq1 248 246 .
Chr1	stalkie_big_nohaplotig	exon	173192507	173192512	100	+	.	Parent=comp152226_c0_seq1.mrna1;Target=comp152226_c0_seq1 254 249 .
Chr1	stalkie_big_nohaplotig	exon	173394523	173395431	99	+	.	Parent=comp152226_c0_seq1.mrna1;Target=comp152226_c0_seq1 1163 255 .
Chr1	stalkie_big_nohaplotig	CDS	173395261	173395431	.	+	0	Parent=comp152226_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173121279	173122424	.	+	.	ID=comp163394_c3_seq1.mrna1;geneID=comp163394_c3_seq1.path1;Name=comp163394_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1140;mismatches=6;indels=0;unknowns=0;Target=comp163394_c3_seq1 1146 1 .;CDS_Target=comp163394_c3_seq1 357 181 .;locus=RLOC_00013825
Chr1	stalkie_big_nohaplotig	exon	173121279	173122424	99	+	.	Parent=comp163394_c3_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	173121459	173121635	.	+	0	Parent=comp163394_c3_seq1.mrna1
Chr1	gffcl	locus	173117774	173118831	.	+	.	ID=RLOC_00013826;geneIDs=comp159711_c0_seq1.path1;transcripts=comp159711_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173117774	173118831	.	+	.	ID=comp159711_c0_seq1.mrna1;geneID=comp159711_c0_seq1.path1;Name=comp159711_c0_seq1;Dir=sensecoverage=99.9;identity=100.0;matches=922;mismatches=0;indels=0;unknowns=0;Target=comp159711_c0_seq1 697 810 +;locus=RLOC_00013826
Chr1	stalkie_big_nohaplotig	exon	173117774	173117951	100	+	.	Parent=comp159711_c0_seq1.mrna1;Target=comp159711_c0_seq1 1 178 +
Chr1	stalkie_big_nohaplotig	exon	173118013	173118223	100	+	.	Parent=comp159711_c0_seq1.mrna1;Target=comp159711_c0_seq1 179 389 +
Chr1	stalkie_big_nohaplotig	exon	173118299	173118831	100	+	.	Parent=comp159711_c0_seq1.mrna1;Target=comp159711_c0_seq1 390 922 +
Chr1	stalkie_big_nohaplotig	CDS	173118606	173118719	.	+	0	Parent=comp159711_c0_seq1.mrna1
Chr1	gffcl	locus	173119497	173119991	.	-	.	ID=RLOC_00013827;geneIDs=comp146697_c0_seq1.path1;transcripts=comp146697_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173119497	173119991	.	-	.	ID=comp146697_c0_seq1.mrna1;geneID=comp146697_c0_seq1.path1;Name=comp146697_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=494;mismatches=1;indels=0;unknowns=0;Target=comp146697_c0_seq1 495 1 .;CDS_Target=comp146697_c0_seq1 453 328 .;locus=RLOC_00013827
Chr1	stalkie_big_nohaplotig	exon	173119497	173119991	99	-	.	Parent=comp146697_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	173119539	173119664	.	-	0	Parent=comp146697_c0_seq1.mrna1
Chr1	gffcl	locus	173120266	173121088	.	+	.	ID=RLOC_00013828;geneIDs=comp149395_c0_seq1.path1;transcripts=comp149395_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173120266	173121088	.	+	.	ID=comp149395_c0_seq1.mrna1;geneID=comp149395_c0_seq1.path1;Name=comp149395_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=816;mismatches=6;indels=2;unknowns=0;Target=comp149395_c0_seq1 823 1 .;CDS_Target=comp149395_c0_seq1 96 1 .;locus=RLOC_00013828
Chr1	stalkie_big_nohaplotig	exon	173120266	173121088	99	+	.	Parent=comp149395_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	173120266	173120362	.	+	0	Parent=comp149395_c0_seq1.mrna1
Chr1	gffcl	locus	173186058	173188776	.	+	.	ID=RLOC_00013829;geneIDs=FBgn0036752.1.path1;transcripts=FBgn0036752.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173186058	173188776	.	+	.	ID=FBgn0036752.1.mrna1;geneID=FBgn0036752.1.path1;Name=FBgn0036752.1;Dir=sensecoverage=90.2;identity=99.7;matches=1279;mismatches=4;indels=0;unknowns=100;locus=RLOC_00013829
Chr1	stalkie_big_nohaplotig	exon	173186058	173186813	100	+	.	Parent=FBgn0036752.1.mrna1;Target=FBgn0036752.1 1 756 +
Chr1	stalkie_big_nohaplotig	exon	173188087	173188269	100	+	.	Parent=FBgn0036752.1.mrna1;Target=FBgn0036752.1 757 939 +
Chr1	stalkie_big_nohaplotig	exon	173188333	173188776	98	+	.	Parent=FBgn0036752.1.mrna1;Target=FBgn0036752.1 940 1383 +
Chr1	stalkie_big_nohaplotig	CDS	173186058	173186813	.	+	0	Parent=FBgn0036752.1.mrna1;Target=FBgn0036752.1 1 756 +
Chr1	stalkie_big_nohaplotig	CDS	173188087	173188269	.	+	0	Parent=FBgn0036752.1.mrna1;Target=FBgn0036752.1 757 939 +
Chr1	stalkie_big_nohaplotig	CDS	173188333	173188776	.	+	0	Parent=FBgn0036752.1.mrna1;Target=FBgn0036752.1 940 1383 +
Chr1	gffcl	locus	173195603	173196754	.	.	.	ID=RLOC_00013830;geneIDs=comp155988_c0_seq1.path1,comp155988_c0_seq1.path2;transcripts=comp155988_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173195603	173196754	.	+	.	ID=comp155988_c0_seq1.mrna1;geneID=comp155988_c0_seq1.path1;Name=comp155988_c0_seq1;Dir=indeterminatecoverage=77.6;identity=97.6;matches=1140;mismatches=12;indels=16;unknowns=0;Target=comp155988_c0_seq1 1168 1 .;CDS_Target=comp155988_c0_seq1 353 264 .;locus=RLOC_00013830
Chr1	stalkie_big_nohaplotig	exon	173195603	173196754	97	+	.	Parent=comp155988_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	173195866	173195955	.	+	0	Parent=comp155988_c0_seq1.mrna1
Chr1	gffcl	locus	173197983	173219254	.	-	.	ID=RLOC_00013831;geneIDs=FBgn0052183.1.path1;transcripts=FBgn0052183.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173197983	173219254	.	-	.	ID=FBgn0052183.1.mrna1;geneID=FBgn0052183.1.path1;Name=FBgn0052183.1;Dir=sensecoverage=84.2;identity=99.7;matches=1187;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013831
Chr1	stalkie_big_nohaplotig	exon	173197983	173198288	99	-	.	Parent=FBgn0052183.1.mrna1;Target=FBgn0052183.1 1108 1413 +
Chr1	stalkie_big_nohaplotig	exon	173211040	173211243	99	-	.	Parent=FBgn0052183.1.mrna1;Target=FBgn0052183.1 904 1107 +
Chr1	stalkie_big_nohaplotig	exon	173213676	173213828	100	-	.	Parent=FBgn0052183.1.mrna1;Target=FBgn0052183.1 751 903 +
Chr1	stalkie_big_nohaplotig	exon	173214285	173214583	100	-	.	Parent=FBgn0052183.1.mrna1;Target=FBgn0052183.1 452 750 +
Chr1	stalkie_big_nohaplotig	exon	173216585	173216729	100	-	.	Parent=FBgn0052183.1.mrna1;Target=FBgn0052183.1 307 451 +
Chr1	stalkie_big_nohaplotig	exon	173219172	173219254	100	-	.	Parent=FBgn0052183.1.mrna1;Target=FBgn0052183.1 224 306 +
Chr1	stalkie_big_nohaplotig	CDS	173197983	173198288	.	-	0	Parent=FBgn0052183.1.mrna1;Target=FBgn0052183.1 1108 1413 +
Chr1	stalkie_big_nohaplotig	CDS	173211040	173211243	.	-	0	Parent=FBgn0052183.1.mrna1;Target=FBgn0052183.1 904 1107 +
Chr1	stalkie_big_nohaplotig	CDS	173213676	173213828	.	-	0	Parent=FBgn0052183.1.mrna1;Target=FBgn0052183.1 751 903 +
Chr1	stalkie_big_nohaplotig	CDS	173214285	173214583	.	-	2	Parent=FBgn0052183.1.mrna1;Target=FBgn0052183.1 452 750 +
Chr1	stalkie_big_nohaplotig	CDS	173216585	173216729	.	-	0	Parent=FBgn0052183.1.mrna1;Target=FBgn0052183.1 307 451 +
Chr1	stalkie_big_nohaplotig	CDS	173219172	173219252	.	-	0	Parent=FBgn0052183.1.mrna1;Target=FBgn0052183.1 226 306 +
Chr1	gffcl	locus	173203016	173204470	.	+	.	ID=RLOC_00013832;geneIDs=FBgn0036749.1.path1;transcripts=FBgn0036749.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173203016	173204470	.	+	.	ID=FBgn0036749.1.mrna1;geneID=FBgn0036749.1.path1;Name=FBgn0036749.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1449;mismatches=6;indels=0;unknowns=0;Target=FBgn0036749.1 1455 1 .;locus=RLOC_00013832
Chr1	stalkie_big_nohaplotig	exon	173203016	173204470	99	+	.	Parent=FBgn0036749.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	173203016	173204470	.	+	0	Parent=FBgn0036749.1.mrna1
Chr1	gffcl	locus	173248312	173272654	.	-	.	ID=RLOC_00013833;geneIDs=ORF189.path1,comp154841_c1_seq1.path1;transcripts=comp154841_c1_seq1.mrna1,ORF189.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173248312	173272654	.	-	.	ID=comp154841_c1_seq1.mrna1;geneID=comp154841_c1_seq1.path1;Name=comp154841_c1_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=2951;mismatches=11;indels=0;unknowns=0;locus=RLOC_00013833
Chr1	stalkie_big_nohaplotig	exon	173248312	173248735	99	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1 424 -
Chr1	stalkie_big_nohaplotig	exon	173248799	173248919	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 425 545 -
Chr1	stalkie_big_nohaplotig	exon	173248976	173249236	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 546 806 -
Chr1	stalkie_big_nohaplotig	exon	173250708	173250740	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 818 850 -
Chr1	stalkie_big_nohaplotig	exon	173251839	173251919	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 851 931 -
Chr1	stalkie_big_nohaplotig	exon	173252445	173252537	96	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 932 1024 -
Chr1	stalkie_big_nohaplotig	exon	173252761	173252856	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1025 1120 -
Chr1	stalkie_big_nohaplotig	exon	173253438	173253527	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1121 1210 -
Chr1	stalkie_big_nohaplotig	exon	173257524	173257606	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1211 1293 -
Chr1	stalkie_big_nohaplotig	exon	173260193	173260199	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1294 1300 -
Chr1	stalkie_big_nohaplotig	exon	173260824	173260907	98	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1301 1384 -
Chr1	stalkie_big_nohaplotig	exon	173261071	173261169	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1385 1483 -
Chr1	stalkie_big_nohaplotig	exon	173261474	173261503	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1484 1513 -
Chr1	stalkie_big_nohaplotig	exon	173264890	173264949	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1514 1573 -
Chr1	stalkie_big_nohaplotig	exon	173265038	173265046	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1574 1582 -
Chr1	stalkie_big_nohaplotig	exon	173265110	173265211	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1583 1684 -
Chr1	stalkie_big_nohaplotig	exon	173265506	173265580	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1685 1759 -
Chr1	stalkie_big_nohaplotig	exon	173265652	173265720	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1760 1828 -
Chr1	stalkie_big_nohaplotig	exon	173265789	173265893	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1829 1933 -
Chr1	stalkie_big_nohaplotig	exon	173265954	173265974	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1934 1954 -
Chr1	stalkie_big_nohaplotig	exon	173266035	173266100	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1955 2020 -
Chr1	stalkie_big_nohaplotig	exon	173268193	173268231	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2021 2059 -
Chr1	stalkie_big_nohaplotig	exon	173268335	173268373	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2060 2098 -
Chr1	stalkie_big_nohaplotig	exon	173268950	173268988	97	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2099 2137 -
Chr1	stalkie_big_nohaplotig	exon	173269329	173269379	98	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2138 2188 -
Chr1	stalkie_big_nohaplotig	exon	173270255	173270293	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2189 2227 -
Chr1	stalkie_big_nohaplotig	exon	173270404	173270445	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2228 2269 -
Chr1	stalkie_big_nohaplotig	exon	173270572	173270610	97	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2270 2308 -
Chr1	stalkie_big_nohaplotig	exon	173270710	173270754	97	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2309 2353 -
Chr1	stalkie_big_nohaplotig	exon	173270934	173271014	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2354 2434 -
Chr1	stalkie_big_nohaplotig	exon	173271160	173271201	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2435 2476 -
Chr1	stalkie_big_nohaplotig	exon	173271273	173271338	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2477 2542 -
Chr1	stalkie_big_nohaplotig	exon	173271526	173271570	95	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2543 2587 -
Chr1	stalkie_big_nohaplotig	exon	173271681	173271752	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2588 2659 -
Chr1	stalkie_big_nohaplotig	exon	173272179	173272253	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2660 2734 -
Chr1	stalkie_big_nohaplotig	exon	173272307	173272339	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2735 2767 -
Chr1	stalkie_big_nohaplotig	exon	173272392	173272430	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2768 2806 -
Chr1	stalkie_big_nohaplotig	exon	173272488	173272654	100	-	.	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2807 2973 -
Chr1	stalkie_big_nohaplotig	CDS	173248484	173248735	.	-	2	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 173 424 .
Chr1	stalkie_big_nohaplotig	CDS	173248799	173248919	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 425 545 .
Chr1	stalkie_big_nohaplotig	CDS	173248976	173249236	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 546 806 .
Chr1	stalkie_big_nohaplotig	CDS	173250708	173250740	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 818 850 .
Chr1	stalkie_big_nohaplotig	CDS	173251839	173251919	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 851 931 .
Chr1	stalkie_big_nohaplotig	CDS	173252445	173252537	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 932 1024 .
Chr1	stalkie_big_nohaplotig	CDS	173252761	173252856	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1025 1120 .
Chr1	stalkie_big_nohaplotig	CDS	173253438	173253527	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1121 1210 .
Chr1	stalkie_big_nohaplotig	CDS	173257524	173257606	.	-	2	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1211 1293 .
Chr1	stalkie_big_nohaplotig	CDS	173260193	173260199	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1294 1300 .
Chr1	stalkie_big_nohaplotig	CDS	173260824	173260907	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1301 1384 .
Chr1	stalkie_big_nohaplotig	CDS	173261071	173261169	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1385 1483 .
Chr1	stalkie_big_nohaplotig	CDS	173261474	173261503	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1484 1513 .
Chr1	stalkie_big_nohaplotig	CDS	173264890	173264949	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1514 1573 .
Chr1	stalkie_big_nohaplotig	CDS	173265038	173265046	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1574 1582 .
Chr1	stalkie_big_nohaplotig	CDS	173265110	173265211	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1583 1684 .
Chr1	stalkie_big_nohaplotig	CDS	173265506	173265580	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1685 1759 .
Chr1	stalkie_big_nohaplotig	CDS	173265652	173265720	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1760 1828 .
Chr1	stalkie_big_nohaplotig	CDS	173265789	173265893	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1829 1933 .
Chr1	stalkie_big_nohaplotig	CDS	173265954	173265974	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1934 1954 .
Chr1	stalkie_big_nohaplotig	CDS	173266035	173266100	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 1955 2020 .
Chr1	stalkie_big_nohaplotig	CDS	173268193	173268231	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2021 2059 .
Chr1	stalkie_big_nohaplotig	CDS	173268335	173268373	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2060 2098 .
Chr1	stalkie_big_nohaplotig	CDS	173268950	173268988	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2099 2137 .
Chr1	stalkie_big_nohaplotig	CDS	173269329	173269379	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2138 2188 .
Chr1	stalkie_big_nohaplotig	CDS	173270255	173270293	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2189 2227 .
Chr1	stalkie_big_nohaplotig	CDS	173270404	173270445	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2228 2269 .
Chr1	stalkie_big_nohaplotig	CDS	173270572	173270610	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2270 2308 .
Chr1	stalkie_big_nohaplotig	CDS	173270710	173270754	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2309 2353 .
Chr1	stalkie_big_nohaplotig	CDS	173270934	173271014	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2354 2434 .
Chr1	stalkie_big_nohaplotig	CDS	173271160	173271201	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2435 2476 .
Chr1	stalkie_big_nohaplotig	CDS	173271273	173271338	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2477 2542 .
Chr1	stalkie_big_nohaplotig	CDS	173271526	173271570	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2543 2587 .
Chr1	stalkie_big_nohaplotig	CDS	173271681	173271752	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2588 2659 .
Chr1	stalkie_big_nohaplotig	CDS	173272179	173272253	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2660 2734 .
Chr1	stalkie_big_nohaplotig	CDS	173272307	173272339	.	-	0	Parent=comp154841_c1_seq1.mrna1;Target=comp154841_c1_seq1 2735 2767 .
Chr1	stalkie_big_nohaplotig	mRNA	173248487	173272341	.	-	.	ID=ORF189.mrna1;geneID=ORF189.path1;Name=ORF189;Dir=sensecoverage=100.0;identity=99.5;matches=2568;mismatches=13;indels=0;unknowns=2;locus=RLOC_00013833
Chr1	stalkie_big_nohaplotig	exon	173248487	173248735	99	-	.	Parent=ORF189.mrna1;Target=ORF189 2347 2595 +
Chr1	stalkie_big_nohaplotig	exon	173248799	173248919	100	-	.	Parent=ORF189.mrna1;Target=ORF189 2226 2346 +
Chr1	stalkie_big_nohaplotig	exon	173248976	173249236	100	-	.	Parent=ORF189.mrna1;Target=ORF189 1965 2225 +
Chr1	stalkie_big_nohaplotig	exon	173250708	173250740	100	-	.	Parent=ORF189.mrna1;Target=ORF189 1921 1953 +
Chr1	stalkie_big_nohaplotig	exon	173251839	173251919	100	-	.	Parent=ORF189.mrna1;Target=ORF189 1840 1920 +
Chr1	stalkie_big_nohaplotig	exon	173252445	173252537	96	-	.	Parent=ORF189.mrna1;Target=ORF189 1747 1839 +
Chr1	stalkie_big_nohaplotig	exon	173252761	173252856	100	-	.	Parent=ORF189.mrna1;Target=ORF189 1651 1746 +
Chr1	stalkie_big_nohaplotig	exon	173253438	173253527	100	-	.	Parent=ORF189.mrna1;Target=ORF189 1561 1650 +
Chr1	stalkie_big_nohaplotig	exon	173257524	173257613	97	-	.	Parent=ORF189.mrna1;Target=ORF189 1471 1560 +
Chr1	stalkie_big_nohaplotig	exon	173260824	173260907	98	-	.	Parent=ORF189.mrna1;Target=ORF189 1387 1470 +
Chr1	stalkie_big_nohaplotig	exon	173261071	173261169	100	-	.	Parent=ORF189.mrna1;Target=ORF189 1288 1386 +
Chr1	stalkie_big_nohaplotig	exon	173261474	173261503	100	-	.	Parent=ORF189.mrna1;Target=ORF189 1258 1287 +
Chr1	stalkie_big_nohaplotig	exon	173264890	173264949	100	-	.	Parent=ORF189.mrna1;Target=ORF189 1198 1257 +
Chr1	stalkie_big_nohaplotig	exon	173265038	173265046	100	-	.	Parent=ORF189.mrna1;Target=ORF189 1189 1197 +
Chr1	stalkie_big_nohaplotig	exon	173265110	173265211	100	-	.	Parent=ORF189.mrna1;Target=ORF189 1087 1188 +
Chr1	stalkie_big_nohaplotig	exon	173265506	173265580	100	-	.	Parent=ORF189.mrna1;Target=ORF189 1012 1086 +
Chr1	stalkie_big_nohaplotig	exon	173265652	173265720	100	-	.	Parent=ORF189.mrna1;Target=ORF189 943 1011 +
Chr1	stalkie_big_nohaplotig	exon	173265789	173265893	100	-	.	Parent=ORF189.mrna1;Target=ORF189 838 942 +
Chr1	stalkie_big_nohaplotig	exon	173265954	173265974	100	-	.	Parent=ORF189.mrna1;Target=ORF189 817 837 +
Chr1	stalkie_big_nohaplotig	exon	173266035	173266100	100	-	.	Parent=ORF189.mrna1;Target=ORF189 751 816 +
Chr1	stalkie_big_nohaplotig	exon	173268193	173268231	100	-	.	Parent=ORF189.mrna1;Target=ORF189 712 750 +
Chr1	stalkie_big_nohaplotig	exon	173268335	173268373	100	-	.	Parent=ORF189.mrna1;Target=ORF189 673 711 +
Chr1	stalkie_big_nohaplotig	exon	173268950	173268988	97	-	.	Parent=ORF189.mrna1;Target=ORF189 634 672 +
Chr1	stalkie_big_nohaplotig	exon	173269329	173269379	98	-	.	Parent=ORF189.mrna1;Target=ORF189 583 633 +
Chr1	stalkie_big_nohaplotig	exon	173270255	173270293	100	-	.	Parent=ORF189.mrna1;Target=ORF189 544 582 +
Chr1	stalkie_big_nohaplotig	exon	173270404	173270445	100	-	.	Parent=ORF189.mrna1;Target=ORF189 502 543 +
Chr1	stalkie_big_nohaplotig	exon	173270572	173270610	97	-	.	Parent=ORF189.mrna1;Target=ORF189 463 501 +
Chr1	stalkie_big_nohaplotig	exon	173270710	173270754	97	-	.	Parent=ORF189.mrna1;Target=ORF189 418 462 +
Chr1	stalkie_big_nohaplotig	exon	173270934	173271014	100	-	.	Parent=ORF189.mrna1;Target=ORF189 337 417 +
Chr1	stalkie_big_nohaplotig	exon	173271160	173271201	100	-	.	Parent=ORF189.mrna1;Target=ORF189 295 336 +
Chr1	stalkie_big_nohaplotig	exon	173271273	173271338	100	-	.	Parent=ORF189.mrna1;Target=ORF189 229 294 +
Chr1	stalkie_big_nohaplotig	exon	173271526	173271570	95	-	.	Parent=ORF189.mrna1;Target=ORF189 184 228 +
Chr1	stalkie_big_nohaplotig	exon	173271681	173271752	100	-	.	Parent=ORF189.mrna1;Target=ORF189 112 183 +
Chr1	stalkie_big_nohaplotig	exon	173272179	173272253	100	-	.	Parent=ORF189.mrna1;Target=ORF189 37 111 +
Chr1	stalkie_big_nohaplotig	exon	173272307	173272341	100	-	.	Parent=ORF189.mrna1;Target=ORF189 2 36 +
Chr1	stalkie_big_nohaplotig	CDS	173248487	173248735	.	-	2	Parent=ORF189.mrna1;Target=ORF189 2347 2595 +
Chr1	stalkie_big_nohaplotig	CDS	173248799	173248919	.	-	0	Parent=ORF189.mrna1;Target=ORF189 2226 2346 +
Chr1	stalkie_big_nohaplotig	CDS	173248976	173249236	.	-	0	Parent=ORF189.mrna1;Target=ORF189 1965 2225 +
Chr1	stalkie_big_nohaplotig	CDS	173250708	173250740	.	-	0	Parent=ORF189.mrna1;Target=ORF189 1921 1953 +
Chr1	stalkie_big_nohaplotig	CDS	173251839	173251919	.	-	0	Parent=ORF189.mrna1;Target=ORF189 1840 1920 +
Chr1	stalkie_big_nohaplotig	CDS	173252445	173252537	.	-	0	Parent=ORF189.mrna1;Target=ORF189 1747 1839 +
Chr1	stalkie_big_nohaplotig	CDS	173252761	173252856	.	-	0	Parent=ORF189.mrna1;Target=ORF189 1651 1746 +
Chr1	stalkie_big_nohaplotig	CDS	173253438	173253527	.	-	0	Parent=ORF189.mrna1;Target=ORF189 1561 1650 +
Chr1	stalkie_big_nohaplotig	CDS	173257524	173257613	.	-	0	Parent=ORF189.mrna1;Target=ORF189 1471 1560 +
Chr1	stalkie_big_nohaplotig	CDS	173260824	173260907	.	-	0	Parent=ORF189.mrna1;Target=ORF189 1387 1470 +
Chr1	stalkie_big_nohaplotig	CDS	173261071	173261169	.	-	0	Parent=ORF189.mrna1;Target=ORF189 1288 1386 +
Chr1	stalkie_big_nohaplotig	CDS	173261474	173261503	.	-	0	Parent=ORF189.mrna1;Target=ORF189 1258 1287 +
Chr1	stalkie_big_nohaplotig	CDS	173264890	173264949	.	-	0	Parent=ORF189.mrna1;Target=ORF189 1198 1257 +
Chr1	stalkie_big_nohaplotig	CDS	173265038	173265046	.	-	0	Parent=ORF189.mrna1;Target=ORF189 1189 1197 +
Chr1	stalkie_big_nohaplotig	CDS	173265110	173265211	.	-	0	Parent=ORF189.mrna1;Target=ORF189 1087 1188 +
Chr1	stalkie_big_nohaplotig	CDS	173265506	173265580	.	-	0	Parent=ORF189.mrna1;Target=ORF189 1012 1086 +
Chr1	stalkie_big_nohaplotig	CDS	173265652	173265720	.	-	0	Parent=ORF189.mrna1;Target=ORF189 943 1011 +
Chr1	stalkie_big_nohaplotig	CDS	173265789	173265893	.	-	0	Parent=ORF189.mrna1;Target=ORF189 838 942 +
Chr1	stalkie_big_nohaplotig	CDS	173265954	173265974	.	-	0	Parent=ORF189.mrna1;Target=ORF189 817 837 +
Chr1	stalkie_big_nohaplotig	CDS	173266035	173266100	.	-	0	Parent=ORF189.mrna1;Target=ORF189 751 816 +
Chr1	stalkie_big_nohaplotig	CDS	173268193	173268231	.	-	0	Parent=ORF189.mrna1;Target=ORF189 712 750 +
Chr1	stalkie_big_nohaplotig	CDS	173268335	173268373	.	-	0	Parent=ORF189.mrna1;Target=ORF189 673 711 +
Chr1	stalkie_big_nohaplotig	CDS	173268950	173268988	.	-	0	Parent=ORF189.mrna1;Target=ORF189 634 672 +
Chr1	stalkie_big_nohaplotig	CDS	173269329	173269379	.	-	0	Parent=ORF189.mrna1;Target=ORF189 583 633 +
Chr1	stalkie_big_nohaplotig	CDS	173270255	173270293	.	-	0	Parent=ORF189.mrna1;Target=ORF189 544 582 +
Chr1	stalkie_big_nohaplotig	CDS	173270404	173270445	.	-	0	Parent=ORF189.mrna1;Target=ORF189 502 543 +
Chr1	stalkie_big_nohaplotig	CDS	173270572	173270610	.	-	0	Parent=ORF189.mrna1;Target=ORF189 463 501 +
Chr1	stalkie_big_nohaplotig	CDS	173270710	173270754	.	-	0	Parent=ORF189.mrna1;Target=ORF189 418 462 +
Chr1	stalkie_big_nohaplotig	CDS	173270934	173271014	.	-	0	Parent=ORF189.mrna1;Target=ORF189 337 417 +
Chr1	stalkie_big_nohaplotig	CDS	173271160	173271201	.	-	0	Parent=ORF189.mrna1;Target=ORF189 295 336 +
Chr1	stalkie_big_nohaplotig	CDS	173271273	173271338	.	-	0	Parent=ORF189.mrna1;Target=ORF189 229 294 +
Chr1	stalkie_big_nohaplotig	CDS	173271526	173271570	.	-	0	Parent=ORF189.mrna1;Target=ORF189 184 228 +
Chr1	stalkie_big_nohaplotig	CDS	173271681	173271752	.	-	0	Parent=ORF189.mrna1;Target=ORF189 112 183 +
Chr1	stalkie_big_nohaplotig	CDS	173272179	173272253	.	-	0	Parent=ORF189.mrna1;Target=ORF189 37 111 +
Chr1	stalkie_big_nohaplotig	CDS	173272307	173272339	.	-	0	Parent=ORF189.mrna1;Target=ORF189 4 36 +
Chr1	stalkie_big_nohaplotig	mRNA	173276106	173276639	.	-	.	ID=comp117385_c0_seq1.mrna1;geneID=comp117385_c0_seq1.path1;Name=comp117385_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=533;mismatches=1;indels=0;unknowns=0;Target=comp117385_c0_seq1 535 2 .;CDS_Target=comp117385_c0_seq1 344 279 .;locus=RLOC_00013834
Chr1	stalkie_big_nohaplotig	exon	173276106	173276639	99	-	.	Parent=comp117385_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	173276297	173276362	.	-	0	Parent=comp117385_c0_seq1.mrna1
Chr1	gffcl	locus	173288083	173303341	.	+	.	ID=RLOC_00013835;geneIDs=ORF1516.path1;transcripts=ORF1516.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173288083	173303341	.	+	.	ID=ORF1516.mrna1;geneID=ORF1516.path1;Name=ORF1516;Dir=sensecoverage=100.0;identity=99.4;matches=1068;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013835
Chr1	stalkie_big_nohaplotig	exon	173288083	173288115	96	+	.	Parent=ORF1516.mrna1;Target=ORF1516 1 33 +
Chr1	stalkie_big_nohaplotig	exon	173289184	173289216	100	+	.	Parent=ORF1516.mrna1;Target=ORF1516 34 66 +
Chr1	stalkie_big_nohaplotig	exon	173290373	173290435	100	+	.	Parent=ORF1516.mrna1;Target=ORF1516 67 129 +
Chr1	stalkie_big_nohaplotig	exon	173291196	173291252	100	+	.	Parent=ORF1516.mrna1;Target=ORF1516 130 186 +
Chr1	stalkie_big_nohaplotig	exon	173291618	173291668	100	+	.	Parent=ORF1516.mrna1;Target=ORF1516 187 237 +
Chr1	stalkie_big_nohaplotig	exon	173292592	173292645	98	+	.	Parent=ORF1516.mrna1;Target=ORF1516 238 291 +
Chr1	stalkie_big_nohaplotig	exon	173293465	173293503	100	+	.	Parent=ORF1516.mrna1;Target=ORF1516 292 330 +
Chr1	stalkie_big_nohaplotig	exon	173293682	173293738	100	+	.	Parent=ORF1516.mrna1;Target=ORF1516 331 387 +
Chr1	stalkie_big_nohaplotig	exon	173294418	173294441	100	+	.	Parent=ORF1516.mrna1;Target=ORF1516 388 411 +
Chr1	stalkie_big_nohaplotig	exon	173296320	173296379	100	+	.	Parent=ORF1516.mrna1;Target=ORF1516 412 471 +
Chr1	stalkie_big_nohaplotig	exon	173297648	173297719	100	+	.	Parent=ORF1516.mrna1;Target=ORF1516 472 543 +
Chr1	stalkie_big_nohaplotig	exon	173298599	173298703	100	+	.	Parent=ORF1516.mrna1;Target=ORF1516 544 648 +
Chr1	stalkie_big_nohaplotig	exon	173300534	173300569	97	+	.	Parent=ORF1516.mrna1;Target=ORF1516 649 684 +
Chr1	stalkie_big_nohaplotig	exon	173301087	173301113	100	+	.	Parent=ORF1516.mrna1;Target=ORF1516 685 711 +
Chr1	stalkie_big_nohaplotig	exon	173301272	173301334	96	+	.	Parent=ORF1516.mrna1;Target=ORF1516 712 774 +
Chr1	stalkie_big_nohaplotig	exon	173301465	173301566	99	+	.	Parent=ORF1516.mrna1;Target=ORF1516 775 876 +
Chr1	stalkie_big_nohaplotig	exon	173301628	173301678	100	+	.	Parent=ORF1516.mrna1;Target=ORF1516 877 927 +
Chr1	stalkie_big_nohaplotig	exon	173302868	173302936	100	+	.	Parent=ORF1516.mrna1;Target=ORF1516 928 996 +
Chr1	stalkie_big_nohaplotig	exon	173303015	173303032	100	+	.	Parent=ORF1516.mrna1;Target=ORF1516 997 1014 +
Chr1	stalkie_big_nohaplotig	exon	173303116	173303142	100	+	.	Parent=ORF1516.mrna1;Target=ORF1516 1015 1041 +
Chr1	stalkie_big_nohaplotig	exon	173303221	173303229	100	+	.	Parent=ORF1516.mrna1;Target=ORF1516 1042 1050 +
Chr1	stalkie_big_nohaplotig	exon	173303318	173303341	100	+	.	Parent=ORF1516.mrna1;Target=ORF1516 1051 1074 +
Chr1	stalkie_big_nohaplotig	CDS	173288083	173288115	.	+	0	Parent=ORF1516.mrna1;Target=ORF1516 1 33 +
Chr1	stalkie_big_nohaplotig	CDS	173289184	173289216	.	+	0	Parent=ORF1516.mrna1;Target=ORF1516 34 66 +
Chr1	stalkie_big_nohaplotig	CDS	173290373	173290435	.	+	0	Parent=ORF1516.mrna1;Target=ORF1516 67 129 +
Chr1	stalkie_big_nohaplotig	CDS	173291196	173291252	.	+	0	Parent=ORF1516.mrna1;Target=ORF1516 130 186 +
Chr1	stalkie_big_nohaplotig	CDS	173291618	173291668	.	+	0	Parent=ORF1516.mrna1;Target=ORF1516 187 237 +
Chr1	stalkie_big_nohaplotig	CDS	173292592	173292645	.	+	0	Parent=ORF1516.mrna1;Target=ORF1516 238 291 +
Chr1	stalkie_big_nohaplotig	CDS	173293465	173293503	.	+	0	Parent=ORF1516.mrna1;Target=ORF1516 292 330 +
Chr1	stalkie_big_nohaplotig	CDS	173293682	173293738	.	+	0	Parent=ORF1516.mrna1;Target=ORF1516 331 387 +
Chr1	stalkie_big_nohaplotig	CDS	173294418	173294441	.	+	0	Parent=ORF1516.mrna1;Target=ORF1516 388 411 +
Chr1	stalkie_big_nohaplotig	CDS	173296320	173296379	.	+	0	Parent=ORF1516.mrna1;Target=ORF1516 412 471 +
Chr1	stalkie_big_nohaplotig	CDS	173297648	173297719	.	+	0	Parent=ORF1516.mrna1;Target=ORF1516 472 543 +
Chr1	stalkie_big_nohaplotig	CDS	173298599	173298703	.	+	0	Parent=ORF1516.mrna1;Target=ORF1516 544 648 +
Chr1	stalkie_big_nohaplotig	CDS	173300534	173300569	.	+	0	Parent=ORF1516.mrna1;Target=ORF1516 649 684 +
Chr1	stalkie_big_nohaplotig	CDS	173301087	173301113	.	+	0	Parent=ORF1516.mrna1;Target=ORF1516 685 711 +
Chr1	stalkie_big_nohaplotig	CDS	173301272	173301334	.	+	0	Parent=ORF1516.mrna1;Target=ORF1516 712 774 +
Chr1	stalkie_big_nohaplotig	CDS	173301465	173301566	.	+	0	Parent=ORF1516.mrna1;Target=ORF1516 775 876 +
Chr1	stalkie_big_nohaplotig	CDS	173301628	173301678	.	+	0	Parent=ORF1516.mrna1;Target=ORF1516 877 927 +
Chr1	stalkie_big_nohaplotig	CDS	173302868	173302936	.	+	0	Parent=ORF1516.mrna1;Target=ORF1516 928 996 +
Chr1	stalkie_big_nohaplotig	CDS	173303015	173303032	.	+	0	Parent=ORF1516.mrna1;Target=ORF1516 997 1014 +
Chr1	stalkie_big_nohaplotig	CDS	173303116	173303142	.	+	0	Parent=ORF1516.mrna1;Target=ORF1516 1015 1041 +
Chr1	stalkie_big_nohaplotig	CDS	173303221	173303229	.	+	0	Parent=ORF1516.mrna1;Target=ORF1516 1042 1050 +
Chr1	stalkie_big_nohaplotig	CDS	173303318	173303341	.	+	0	Parent=ORF1516.mrna1;Target=ORF1516 1051 1074 +
Chr1	gffcl	locus	173295173	173295734	.	-	.	ID=RLOC_00013836;geneIDs=comp145790_c2_seq1.path1;transcripts=comp145790_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173295173	173295734	.	-	.	ID=comp145790_c2_seq1.mrna1;geneID=comp145790_c2_seq1.path1;Name=comp145790_c2_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=554;mismatches=8;indels=0;unknowns=0;Target=comp145790_c2_seq1 562 1 .;CDS_Target=comp145790_c2_seq1 560 363 .;locus=RLOC_00013836
Chr1	stalkie_big_nohaplotig	exon	173295173	173295734	98	-	.	Parent=comp145790_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	173295175	173295372	.	-	0	Parent=comp145790_c2_seq1.mrna1
Chr1	gffcl	locus	173323050	173341794	.	+	.	ID=RLOC_00013837;geneIDs=ORF1063.path1;transcripts=ORF1063.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173323050	173341794	.	+	.	ID=ORF1063.mrna1;geneID=ORF1063.path1;Name=ORF1063;Dir=sensecoverage=97.1;identity=99.3;matches=1213;mismatches=8;indels=0;unknowns=0;locus=RLOC_00013837
Chr1	stalkie_big_nohaplotig	exon	173323050	173323094	100	+	.	Parent=ORF1063.mrna1;Target=ORF1063 1 45 +
Chr1	stalkie_big_nohaplotig	exon	173323220	173323264	97	+	.	Parent=ORF1063.mrna1;Target=ORF1063 46 90 +
Chr1	stalkie_big_nohaplotig	exon	173323669	173323713	100	+	.	Parent=ORF1063.mrna1;Target=ORF1063 91 135 +
Chr1	stalkie_big_nohaplotig	exon	173324036	173324077	100	+	.	Parent=ORF1063.mrna1;Target=ORF1063 136 177 +
Chr1	stalkie_big_nohaplotig	exon	173324428	173324460	100	+	.	Parent=ORF1063.mrna1;Target=ORF1063 178 210 +
Chr1	stalkie_big_nohaplotig	exon	173325634	173325666	100	+	.	Parent=ORF1063.mrna1;Target=ORF1063 211 243 +
Chr1	stalkie_big_nohaplotig	exon	173325823	173325873	98	+	.	Parent=ORF1063.mrna1;Target=ORF1063 244 294 +
Chr1	stalkie_big_nohaplotig	exon	173327071	173327106	100	+	.	Parent=ORF1063.mrna1;Target=ORF1063 295 330 +
Chr1	stalkie_big_nohaplotig	exon	173327458	173327499	97	+	.	Parent=ORF1063.mrna1;Target=ORF1063 331 372 +
Chr1	stalkie_big_nohaplotig	exon	173327789	173327830	100	+	.	Parent=ORF1063.mrna1;Target=ORF1063 373 414 +
Chr1	stalkie_big_nohaplotig	exon	173328812	173328853	100	+	.	Parent=ORF1063.mrna1;Target=ORF1063 415 456 +
Chr1	stalkie_big_nohaplotig	exon	173329948	173329983	100	+	.	Parent=ORF1063.mrna1;Target=ORF1063 457 492 +
Chr1	stalkie_big_nohaplotig	exon	173330362	173330403	97	+	.	Parent=ORF1063.mrna1;Target=ORF1063 493 534 +
Chr1	stalkie_big_nohaplotig	exon	173330671	173330712	97	+	.	Parent=ORF1063.mrna1;Target=ORF1063 535 576 +
Chr1	stalkie_big_nohaplotig	exon	173330856	173330897	100	+	.	Parent=ORF1063.mrna1;Target=ORF1063 577 618 +
Chr1	stalkie_big_nohaplotig	exon	173332989	173333024	100	+	.	Parent=ORF1063.mrna1;Target=ORF1063 619 654 +
Chr1	stalkie_big_nohaplotig	exon	173333644	173333682	100	+	.	Parent=ORF1063.mrna1;Target=ORF1063 655 693 +
Chr1	stalkie_big_nohaplotig	exon	173334375	173334410	100	+	.	Parent=ORF1063.mrna1;Target=ORF1063 694 729 +
Chr1	stalkie_big_nohaplotig	exon	173335203	173335247	100	+	.	Parent=ORF1063.mrna1;Target=ORF1063 730 774 +
Chr1	stalkie_big_nohaplotig	exon	173336948	173336995	100	+	.	Parent=ORF1063.mrna1;Target=ORF1063 775 822 +
Chr1	stalkie_big_nohaplotig	exon	173337142	173337198	100	+	.	Parent=ORF1063.mrna1;Target=ORF1063 823 879 +
Chr1	stalkie_big_nohaplotig	exon	173337293	173337325	100	+	.	Parent=ORF1063.mrna1;Target=ORF1063 880 912 +
Chr1	stalkie_big_nohaplotig	exon	173338451	173338477	100	+	.	Parent=ORF1063.mrna1;Target=ORF1063 913 939 +
Chr1	stalkie_big_nohaplotig	exon	173338641	173338694	100	+	.	Parent=ORF1063.mrna1;Target=ORF1063 940 993 +
Chr1	stalkie_big_nohaplotig	exon	173338765	173338806	100	+	.	Parent=ORF1063.mrna1;Target=ORF1063 994 1035 +
Chr1	stalkie_big_nohaplotig	exon	173339655	173339732	100	+	.	Parent=ORF1063.mrna1;Target=ORF1063 1036 1113 +
Chr1	stalkie_big_nohaplotig	exon	173340592	173340633	97	+	.	Parent=ORF1063.mrna1;Target=ORF1063 1114 1155 +
Chr1	stalkie_big_nohaplotig	exon	173340854	173340895	95	+	.	Parent=ORF1063.mrna1;Target=ORF1063 1156 1197 +
Chr1	stalkie_big_nohaplotig	exon	173341771	173341794	100	+	.	Parent=ORF1063.mrna1;Target=ORF1063 1198 1221 +
Chr1	stalkie_big_nohaplotig	CDS	173323050	173323094	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 1 45 +
Chr1	stalkie_big_nohaplotig	CDS	173323220	173323264	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 46 90 +
Chr1	stalkie_big_nohaplotig	CDS	173323669	173323713	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 91 135 +
Chr1	stalkie_big_nohaplotig	CDS	173324036	173324077	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 136 177 +
Chr1	stalkie_big_nohaplotig	CDS	173324428	173324460	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 178 210 +
Chr1	stalkie_big_nohaplotig	CDS	173325634	173325666	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 211 243 +
Chr1	stalkie_big_nohaplotig	CDS	173325823	173325873	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 244 294 +
Chr1	stalkie_big_nohaplotig	CDS	173327071	173327106	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 295 330 +
Chr1	stalkie_big_nohaplotig	CDS	173327458	173327499	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 331 372 +
Chr1	stalkie_big_nohaplotig	CDS	173327789	173327830	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 373 414 +
Chr1	stalkie_big_nohaplotig	CDS	173328812	173328853	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 415 456 +
Chr1	stalkie_big_nohaplotig	CDS	173329948	173329983	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 457 492 +
Chr1	stalkie_big_nohaplotig	CDS	173330362	173330403	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 493 534 +
Chr1	stalkie_big_nohaplotig	CDS	173330671	173330712	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 535 576 +
Chr1	stalkie_big_nohaplotig	CDS	173330856	173330897	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 577 618 +
Chr1	stalkie_big_nohaplotig	CDS	173332989	173333024	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 619 654 +
Chr1	stalkie_big_nohaplotig	CDS	173333644	173333682	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 655 693 +
Chr1	stalkie_big_nohaplotig	CDS	173334375	173334410	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 694 729 +
Chr1	stalkie_big_nohaplotig	CDS	173335203	173335247	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 730 774 +
Chr1	stalkie_big_nohaplotig	CDS	173336948	173336995	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 775 822 +
Chr1	stalkie_big_nohaplotig	CDS	173337142	173337198	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 823 879 +
Chr1	stalkie_big_nohaplotig	CDS	173337293	173337325	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 880 912 +
Chr1	stalkie_big_nohaplotig	CDS	173338451	173338477	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 913 939 +
Chr1	stalkie_big_nohaplotig	CDS	173338641	173338694	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 940 993 +
Chr1	stalkie_big_nohaplotig	CDS	173338765	173338806	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 994 1035 +
Chr1	stalkie_big_nohaplotig	CDS	173339655	173339732	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 1036 1113 +
Chr1	stalkie_big_nohaplotig	CDS	173340592	173340633	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 1114 1155 +
Chr1	stalkie_big_nohaplotig	CDS	173340854	173340895	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 1156 1197 +
Chr1	stalkie_big_nohaplotig	CDS	173341771	173341794	.	+	0	Parent=ORF1063.mrna1;Target=ORF1063 1198 1221 +
Chr1	gffcl	locus	173346918	173355514	.	+	.	ID=RLOC_00013838;geneIDs=comp150400_c1_seq1.path1;transcripts=comp150400_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173346918	173355514	.	+	.	ID=comp150400_c1_seq1.mrna1;geneID=comp150400_c1_seq1.path1;Name=comp150400_c1_seq1;Dir=sensecoverage=99.0;identity=98.8;matches=719;mismatches=9;indels=0;unknowns=0;locus=RLOC_00013838
Chr1	stalkie_big_nohaplotig	exon	173346918	173347219	97	+	.	Parent=comp150400_c1_seq1.mrna1;Target=comp150400_c1_seq1 8 309 +
Chr1	stalkie_big_nohaplotig	exon	173350978	173351016	100	+	.	Parent=comp150400_c1_seq1.mrna1;Target=comp150400_c1_seq1 310 348 +
Chr1	stalkie_big_nohaplotig	exon	173351475	173351537	100	+	.	Parent=comp150400_c1_seq1.mrna1;Target=comp150400_c1_seq1 349 411 +
Chr1	stalkie_big_nohaplotig	exon	173351607	173351648	100	+	.	Parent=comp150400_c1_seq1.mrna1;Target=comp150400_c1_seq1 412 453 +
Chr1	stalkie_big_nohaplotig	exon	173351990	173352028	100	+	.	Parent=comp150400_c1_seq1.mrna1;Target=comp150400_c1_seq1 454 492 +
Chr1	stalkie_big_nohaplotig	exon	173352866	173352898	100	+	.	Parent=comp150400_c1_seq1.mrna1;Target=comp150400_c1_seq1 493 525 +
Chr1	stalkie_big_nohaplotig	exon	173353329	173353358	100	+	.	Parent=comp150400_c1_seq1.mrna1;Target=comp150400_c1_seq1 526 555 +
Chr1	stalkie_big_nohaplotig	exon	173353447	173353542	100	+	.	Parent=comp150400_c1_seq1.mrna1;Target=comp150400_c1_seq1 556 651 +
Chr1	stalkie_big_nohaplotig	exon	173355095	173355124	96	+	.	Parent=comp150400_c1_seq1.mrna1;Target=comp150400_c1_seq1 652 681 +
Chr1	stalkie_big_nohaplotig	exon	173355335	173355364	100	+	.	Parent=comp150400_c1_seq1.mrna1;Target=comp150400_c1_seq1 682 711 +
Chr1	stalkie_big_nohaplotig	exon	173355491	173355514	100	+	.	Parent=comp150400_c1_seq1.mrna1;Target=comp150400_c1_seq1 712 735 +
Chr1	stalkie_big_nohaplotig	CDS	173351527	173351537	.	+	0	Parent=comp150400_c1_seq1.mrna1;Target=comp150400_c1_seq1 401 411 +
Chr1	stalkie_big_nohaplotig	CDS	173351607	173351648	.	+	1	Parent=comp150400_c1_seq1.mrna1;Target=comp150400_c1_seq1 412 453 +
Chr1	stalkie_big_nohaplotig	CDS	173351990	173352028	.	+	1	Parent=comp150400_c1_seq1.mrna1;Target=comp150400_c1_seq1 454 492 +
Chr1	stalkie_big_nohaplotig	CDS	173352866	173352898	.	+	1	Parent=comp150400_c1_seq1.mrna1;Target=comp150400_c1_seq1 493 525 +
Chr1	stalkie_big_nohaplotig	CDS	173353329	173353358	.	+	1	Parent=comp150400_c1_seq1.mrna1;Target=comp150400_c1_seq1 526 555 +
Chr1	stalkie_big_nohaplotig	CDS	173353447	173353540	.	+	1	Parent=comp150400_c1_seq1.mrna1;Target=comp150400_c1_seq1 556 649 +
Chr1	gffcl	locus	173357356	173357592	.	-	.	ID=RLOC_00013839;geneIDs=comp150986_c0_seq1.path1;transcripts=comp150986_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173357356	173357592	.	-	.	ID=comp150986_c0_seq1.mrna1;geneID=comp150986_c0_seq1.path1;Name=comp150986_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.6;matches=236;mismatches=1;indels=0;unknowns=0;Target=comp150986_c0_seq1 240 4 .;CDS_Target=comp150986_c0_seq1 101 6 .;locus=RLOC_00013839
Chr1	stalkie_big_nohaplotig	exon	173357356	173357592	99	-	.	Parent=comp150986_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	173357495	173357590	.	-	0	Parent=comp150986_c0_seq1.mrna1
Chr1	gffcl	locus	173433347	173444388	.	-	.	ID=RLOC_00013841;geneIDs=FBgn0027111.1.path1;transcripts=FBgn0027111.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173433347	173444388	.	-	.	ID=FBgn0027111.1.mrna1;geneID=FBgn0027111.1.path1;Name=FBgn0027111.1;Dir=sensecoverage=100.0;identity=99.8;matches=566;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013841
Chr1	stalkie_big_nohaplotig	exon	173433347	173433366	100	-	.	Parent=FBgn0027111.1.mrna1;Target=FBgn0027111.1 548 567 +
Chr1	stalkie_big_nohaplotig	exon	173436356	173436535	99	-	.	Parent=FBgn0027111.1.mrna1;Target=FBgn0027111.1 368 547 +
Chr1	stalkie_big_nohaplotig	exon	173442943	173443080	100	-	.	Parent=FBgn0027111.1.mrna1;Target=FBgn0027111.1 230 367 +
Chr1	stalkie_big_nohaplotig	exon	173444160	173444388	100	-	.	Parent=FBgn0027111.1.mrna1;Target=FBgn0027111.1 1 229 +
Chr1	stalkie_big_nohaplotig	CDS	173433347	173433366	.	-	2	Parent=FBgn0027111.1.mrna1;Target=FBgn0027111.1 548 567 +
Chr1	stalkie_big_nohaplotig	CDS	173436356	173436535	.	-	2	Parent=FBgn0027111.1.mrna1;Target=FBgn0027111.1 368 547 +
Chr1	stalkie_big_nohaplotig	CDS	173442943	173443080	.	-	2	Parent=FBgn0027111.1.mrna1;Target=FBgn0027111.1 230 367 +
Chr1	stalkie_big_nohaplotig	CDS	173444160	173444388	.	-	0	Parent=FBgn0027111.1.mrna1;Target=FBgn0027111.1 1 229 +
Chr1	gffcl	locus	173532124	173532819	.	+	.	ID=RLOC_00013842;geneIDs=comp118276_c0_seq1.path1;transcripts=comp118276_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173532124	173532819	.	+	.	ID=comp118276_c0_seq1.mrna1;geneID=comp118276_c0_seq1.path1;Name=comp118276_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=691;mismatches=5;indels=0;unknowns=0;Target=comp118276_c0_seq1 696 1 .;CDS_Target=comp118276_c0_seq1 227 162 .;locus=RLOC_00013842
Chr1	stalkie_big_nohaplotig	exon	173532124	173532819	99	+	.	Parent=comp118276_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	173532285	173532350	.	+	0	Parent=comp118276_c0_seq1.mrna1
Chr1	gffcl	locus	173533090	173538202	.	+	.	ID=RLOC_00013843;geneIDs=FBgn0036877.1.path1;transcripts=FBgn0036877.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173533090	173538202	.	+	.	ID=FBgn0036877.1.mrna1;geneID=FBgn0036877.1.path1;Name=FBgn0036877.1;Dir=sensecoverage=100.0;identity=99.8;matches=1242;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013843
Chr1	stalkie_big_nohaplotig	exon	173533090	173533278	100	+	.	Parent=FBgn0036877.1.mrna1;Target=FBgn0036877.1 1 189 +
Chr1	stalkie_big_nohaplotig	exon	173536701	173536799	100	+	.	Parent=FBgn0036877.1.mrna1;Target=FBgn0036877.1 190 288 +
Chr1	stalkie_big_nohaplotig	exon	173536883	173536966	100	+	.	Parent=FBgn0036877.1.mrna1;Target=FBgn0036877.1 289 372 +
Chr1	stalkie_big_nohaplotig	exon	173537146	173537304	100	+	.	Parent=FBgn0036877.1.mrna1;Target=FBgn0036877.1 373 531 +
Chr1	stalkie_big_nohaplotig	exon	173537365	173537550	100	+	.	Parent=FBgn0036877.1.mrna1;Target=FBgn0036877.1 532 717 +
Chr1	stalkie_big_nohaplotig	exon	173537612	173537953	99	+	.	Parent=FBgn0036877.1.mrna1;Target=FBgn0036877.1 718 1059 +
Chr1	stalkie_big_nohaplotig	exon	173538017	173538202	98	+	.	Parent=FBgn0036877.1.mrna1;Target=FBgn0036877.1 1060 1245 +
Chr1	stalkie_big_nohaplotig	CDS	173533090	173533278	.	+	0	Parent=FBgn0036877.1.mrna1;Target=FBgn0036877.1 1 189 +
Chr1	stalkie_big_nohaplotig	CDS	173536701	173536799	.	+	0	Parent=FBgn0036877.1.mrna1;Target=FBgn0036877.1 190 288 +
Chr1	stalkie_big_nohaplotig	CDS	173536883	173536966	.	+	0	Parent=FBgn0036877.1.mrna1;Target=FBgn0036877.1 289 372 +
Chr1	stalkie_big_nohaplotig	CDS	173537146	173537304	.	+	0	Parent=FBgn0036877.1.mrna1;Target=FBgn0036877.1 373 531 +
Chr1	stalkie_big_nohaplotig	CDS	173537365	173537550	.	+	0	Parent=FBgn0036877.1.mrna1;Target=FBgn0036877.1 532 717 +
Chr1	stalkie_big_nohaplotig	CDS	173537612	173537953	.	+	0	Parent=FBgn0036877.1.mrna1;Target=FBgn0036877.1 718 1059 +
Chr1	stalkie_big_nohaplotig	CDS	173538017	173538202	.	+	0	Parent=FBgn0036877.1.mrna1;Target=FBgn0036877.1 1060 1245 +
Chr1	gffcl	locus	173534678	173535604	.	-	.	ID=RLOC_00013844;geneIDs=comp150040_c0_seq1.path1;transcripts=comp150040_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173534678	173535604	.	-	.	ID=comp150040_c0_seq1.mrna1;geneID=comp150040_c0_seq1.path1;Name=comp150040_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.5;matches=914;mismatches=13;indels=1;unknowns=0;Target=comp150040_c0_seq1 928 1 .;CDS_Target=comp150040_c0_seq1 397 272 .;locus=RLOC_00013844
Chr1	stalkie_big_nohaplotig	exon	173534678	173535604	98	-	.	Parent=comp150040_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	173535208	173535333	.	-	0	Parent=comp150040_c0_seq1.mrna1
Chr1	gffcl	locus	173538864	173539441	.	-	.	ID=RLOC_00013845;geneIDs=comp782752_c0_seq1.path1;transcripts=comp782752_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173538864	173539441	.	-	.	ID=comp782752_c0_seq1.mrna1;geneID=comp782752_c0_seq1.path1;Name=comp782752_c0_seq1;Dir=indeterminatecoverage=92.5;identity=91.3;matches=494;mismatches=21;indels=26;unknowns=0;locus=RLOC_00013845
Chr1	stalkie_big_nohaplotig	exon	173538864	173539277	90	-	.	Parent=comp782752_c0_seq1.mrna1;Target=comp782752_c0_seq1 585 146 .
Chr1	stalkie_big_nohaplotig	exon	173539341	173539441	96	-	.	Parent=comp782752_c0_seq1.mrna1;Target=comp782752_c0_seq1 145 45 .
Chr1	stalkie_big_nohaplotig	CDS	173539215	173539277	.	-	1	Parent=comp782752_c0_seq1.mrna1;Target=comp782752_c0_seq1 227 146 .
Chr1	stalkie_big_nohaplotig	CDS	173539341	173539441	.	-	0	Parent=comp782752_c0_seq1.mrna1;Target=comp782752_c0_seq1 145 45 .
Chr1	stalkie_big_nohaplotig	mRNA	173604922	173608798	.	+	.	ID=FBgn0035505.1.mrna1;geneID=FBgn0035505.1.path1;Name=FBgn0035505.1;Dir=sensecoverage=100.0;identity=100.0;matches=954;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013846
Chr1	stalkie_big_nohaplotig	exon	173604922	173605213	100	+	.	Parent=FBgn0035505.1.mrna1;Target=FBgn0035505.1 1 292 +
Chr1	stalkie_big_nohaplotig	exon	173605295	173605490	100	+	.	Parent=FBgn0035505.1.mrna1;Target=FBgn0035505.1 293 488 +
Chr1	stalkie_big_nohaplotig	exon	173606532	173606705	100	+	.	Parent=FBgn0035505.1.mrna1;Target=FBgn0035505.1 489 662 +
Chr1	stalkie_big_nohaplotig	exon	173606795	173607031	100	+	.	Parent=FBgn0035505.1.mrna1;Target=FBgn0035505.1 663 899 +
Chr1	stalkie_big_nohaplotig	exon	173608744	173608798	100	+	.	Parent=FBgn0035505.1.mrna1;Target=FBgn0035505.1 900 954 +
Chr1	stalkie_big_nohaplotig	CDS	173604922	173605213	.	+	0	Parent=FBgn0035505.1.mrna1;Target=FBgn0035505.1 1 292 +
Chr1	stalkie_big_nohaplotig	CDS	173605295	173605490	.	+	2	Parent=FBgn0035505.1.mrna1;Target=FBgn0035505.1 293 488 +
Chr1	stalkie_big_nohaplotig	CDS	173606532	173606705	.	+	1	Parent=FBgn0035505.1.mrna1;Target=FBgn0035505.1 489 662 +
Chr1	stalkie_big_nohaplotig	CDS	173606795	173607031	.	+	1	Parent=FBgn0035505.1.mrna1;Target=FBgn0035505.1 663 899 +
Chr1	stalkie_big_nohaplotig	CDS	173608744	173608798	.	+	1	Parent=FBgn0035505.1.mrna1;Target=FBgn0035505.1 900 954 +
Chr1	gffcl	locus	173607550	173608243	.	+	.	ID=RLOC_00013847;geneIDs=comp154047_c0_seq1.path1;transcripts=comp154047_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173607550	173608243	.	+	.	ID=comp154047_c0_seq1.mrna1;geneID=comp154047_c0_seq1.path1;Name=comp154047_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.3;matches=669;mismatches=24;indels=2;unknowns=0;Target=comp154047_c0_seq1 694 1 .;CDS_Target=comp154047_c0_seq1 100 2 .;locus=RLOC_00013847
Chr1	stalkie_big_nohaplotig	exon	173607550	173608243	96	+	.	Parent=comp154047_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	173607551	173607649	.	+	0	Parent=comp154047_c0_seq1.mrna1
Chr1	gffcl	locus	173610286	173611069	.	-	.	ID=RLOC_00013848;geneIDs=comp158604_c0_seq1.path1;transcripts=comp158604_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173610286	173611069	.	-	.	ID=comp158604_c0_seq1.mrna1;geneID=comp158604_c0_seq1.path1;Name=comp158604_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.5;matches=766;mismatches=18;indels=18;unknowns=0;Target=comp158604_c0_seq1 802 1 .;CDS_Target=comp158604_c0_seq1 582 502 .;locus=RLOC_00013848
Chr1	stalkie_big_nohaplotig	exon	173610286	173611069	95	-	.	Parent=comp158604_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	173610500	173610577	.	-	0	Parent=comp158604_c0_seq1.mrna1
Chr1	gffcl	locus	173611657	173612772	.	-	.	ID=RLOC_00013849;geneIDs=comp160291_c0_seq1.path1;transcripts=comp160291_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173611657	173612772	.	-	.	ID=comp160291_c0_seq1.mrna1;geneID=comp160291_c0_seq1.path1;Name=comp160291_c0_seq1;Dir=indeterminatecoverage=93.6;identity=96.3;matches=1075;mismatches=41;indels=0;unknowns=0;Target=comp160291_c0_seq1 1160 45 .;CDS_Target=comp160291_c0_seq1 422 267 .;locus=RLOC_00013849
Chr1	stalkie_big_nohaplotig	exon	173611657	173612772	96	-	.	Parent=comp160291_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	173612395	173612550	.	-	0	Parent=comp160291_c0_seq1.mrna1
Chr1	gffcl	locus	173626317	173634722	.	+	.	ID=RLOC_00013850;geneIDs=FBgn0035501.2.path1;transcripts=FBgn0035501.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173626317	173634722	.	+	.	ID=FBgn0035501.2.mrna1;geneID=FBgn0035501.2.path1;Name=FBgn0035501.2;Dir=sensecoverage=100.0;identity=100.0;matches=1260;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013850
Chr1	stalkie_big_nohaplotig	exon	173626317	173626416	100	+	.	Parent=FBgn0035501.2.mrna1;Target=FBgn0035501.2 1 100 +
Chr1	stalkie_big_nohaplotig	exon	173633219	173633377	100	+	.	Parent=FBgn0035501.2.mrna1;Target=FBgn0035501.2 101 259 +
Chr1	stalkie_big_nohaplotig	exon	173633443	173633842	100	+	.	Parent=FBgn0035501.2.mrna1;Target=FBgn0035501.2 260 659 +
Chr1	stalkie_big_nohaplotig	exon	173633923	173633998	100	+	.	Parent=FBgn0035501.2.mrna1;Target=FBgn0035501.2 660 735 +
Chr1	stalkie_big_nohaplotig	exon	173634075	173634159	100	+	.	Parent=FBgn0035501.2.mrna1;Target=FBgn0035501.2 736 820 +
Chr1	stalkie_big_nohaplotig	exon	173634223	173634521	100	+	.	Parent=FBgn0035501.2.mrna1;Target=FBgn0035501.2 821 1119 +
Chr1	stalkie_big_nohaplotig	exon	173634582	173634722	100	+	.	Parent=FBgn0035501.2.mrna1;Target=FBgn0035501.2 1120 1260 +
Chr1	stalkie_big_nohaplotig	CDS	173626317	173626416	.	+	0	Parent=FBgn0035501.2.mrna1;Target=FBgn0035501.2 1 100 +
Chr1	stalkie_big_nohaplotig	CDS	173633219	173633377	.	+	2	Parent=FBgn0035501.2.mrna1;Target=FBgn0035501.2 101 259 +
Chr1	stalkie_big_nohaplotig	CDS	173633443	173633842	.	+	2	Parent=FBgn0035501.2.mrna1;Target=FBgn0035501.2 260 659 +
Chr1	stalkie_big_nohaplotig	CDS	173633923	173633998	.	+	1	Parent=FBgn0035501.2.mrna1;Target=FBgn0035501.2 660 735 +
Chr1	stalkie_big_nohaplotig	CDS	173634075	173634159	.	+	0	Parent=FBgn0035501.2.mrna1;Target=FBgn0035501.2 736 820 +
Chr1	stalkie_big_nohaplotig	CDS	173634223	173634521	.	+	2	Parent=FBgn0035501.2.mrna1;Target=FBgn0035501.2 821 1119 +
Chr1	stalkie_big_nohaplotig	CDS	173634582	173634722	.	+	0	Parent=FBgn0035501.2.mrna1;Target=FBgn0035501.2 1120 1260 +
Chr1	gffcl	locus	173693154	173694196	.	-	.	ID=RLOC_00013851;geneIDs=comp149706_c0_seq1.path1;transcripts=comp149706_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173693154	173694196	.	-	.	ID=comp149706_c0_seq1.mrna1;geneID=comp149706_c0_seq1.path1;Name=comp149706_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1029;mismatches=5;indels=9;unknowns=0;Target=comp149706_c0_seq1 1034 1 .;CDS_Target=comp149706_c0_seq1 963 853 .;locus=RLOC_00013851
Chr1	stalkie_big_nohaplotig	exon	173693154	173694196	98	-	.	Parent=comp149706_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	173693225	173693335	.	-	0	Parent=comp149706_c0_seq1.mrna1
Chr1	gffcl	locus	173698296	173699183	.	+	.	ID=RLOC_00013852;geneIDs=comp138825_c1_seq1.path1;transcripts=comp138825_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173698296	173699183	.	+	.	ID=comp138825_c1_seq1.mrna1;geneID=comp138825_c1_seq1.path1;Name=comp138825_c1_seq1;Dir=indeterminatecoverage=99.9;identity=99.3;matches=885;mismatches=3;indels=3;unknowns=0;Target=comp138825_c1_seq1 892 2 .;CDS_Target=comp138825_c1_seq1 351 181 .;locus=RLOC_00013852
Chr1	stalkie_big_nohaplotig	exon	173698296	173699183	99	+	.	Parent=comp138825_c1_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	173698475	173698645	.	+	0	Parent=comp138825_c1_seq1.mrna1
Chr1	gffcl	locus	173756364	173758038	.	+	.	ID=RLOC_00013853;geneIDs=FBgn0052100.1.path1;transcripts=FBgn0052100.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173756364	173758038	.	+	.	ID=FBgn0052100.1.mrna1;geneID=FBgn0052100.1.path1;Name=FBgn0052100.1;Dir=sensecoverage=100.0;identity=99.3;matches=1600;mismatches=11;indels=0;unknowns=0;locus=RLOC_00013853
Chr1	stalkie_big_nohaplotig	exon	173756364	173756393	100	+	.	Parent=FBgn0052100.1.mrna1;Target=FBgn0052100.1 1 30 +
Chr1	stalkie_big_nohaplotig	exon	173756458	173758038	99	+	.	Parent=FBgn0052100.1.mrna1;Target=FBgn0052100.1 31 1611 +
Chr1	stalkie_big_nohaplotig	CDS	173756364	173756393	.	+	0	Parent=FBgn0052100.1.mrna1;Target=FBgn0052100.1 1 30 +
Chr1	stalkie_big_nohaplotig	CDS	173756458	173758038	.	+	0	Parent=FBgn0052100.1.mrna1;Target=FBgn0052100.1 31 1611 +
Chr1	gffcl	locus	173759736	173761995	.	-	.	ID=RLOC_00013854;geneIDs=comp163510_c2_seq1.path2;transcripts=comp163510_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	173759736	173761995	.	-	.	ID=comp163510_c2_seq1.mrna2;geneID=comp163510_c2_seq1.path2;Name=comp163510_c2_seq1;Dir=indeterminatecoverage=83.7;identity=97.5;matches=2232;mismatches=28;indels=30;unknowns=0;Target=comp163510_c2_seq1 2735 446 .;CDS_Target=comp163510_c2_seq1 1506 967 .;locus=RLOC_00013854
Chr1	stalkie_big_nohaplotig	exon	173759736	173761995	97	-	.	Parent=comp163510_c2_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	173760960	173761499	.	-	0	Parent=comp163510_c2_seq1.mrna2
Chr1	gffcl	locus	173763625	173764131	.	-	.	ID=RLOC_00013855;geneIDs=comp162970_c5_seq1.path1;transcripts=comp162970_c5_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173763625	173764131	.	-	.	ID=comp162970_c5_seq1.mrna1;geneID=comp162970_c5_seq1.path1;Name=comp162970_c5_seq1;Dir=indeterminatecoverage=93.0;identity=98.8;matches=501;mismatches=6;indels=0;unknowns=0;Target=comp162970_c5_seq1 507 1 .;CDS_Target=comp162970_c5_seq1 261 94 .;locus=RLOC_00013855
Chr1	stalkie_big_nohaplotig	exon	173763625	173764131	98	-	.	Parent=comp162970_c5_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	173763871	173764038	.	-	0	Parent=comp162970_c5_seq1.mrna1
Chr1	gffcl	locus	173782010	173782883	.	-	.	ID=RLOC_00013856;geneIDs=FBgn0035665.1.path1;transcripts=FBgn0035665.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173782010	173782883	.	-	.	ID=FBgn0035665.1.mrna1;geneID=FBgn0035665.1.path1;Name=FBgn0035665.1;Dir=sensecoverage=100.0;identity=100.0;matches=810;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013856
Chr1	stalkie_big_nohaplotig	exon	173782010	173782559	100	-	.	Parent=FBgn0035665.1.mrna1;Target=FBgn0035665.1 261 810 +
Chr1	stalkie_big_nohaplotig	exon	173782624	173782883	100	-	.	Parent=FBgn0035665.1.mrna1;Target=FBgn0035665.1 1 260 +
Chr1	stalkie_big_nohaplotig	CDS	173782010	173782559	.	-	1	Parent=FBgn0035665.1.mrna1;Target=FBgn0035665.1 261 810 +
Chr1	stalkie_big_nohaplotig	CDS	173782624	173782883	.	-	0	Parent=FBgn0035665.1.mrna1;Target=FBgn0035665.1 1 260 +
Chr1	gffcl	locus	173783099	173783995	.	-	.	ID=RLOC_00013857;geneIDs=FBgn0035665.2.path1;transcripts=FBgn0035665.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173783099	173783995	.	-	.	ID=FBgn0035665.2.mrna1;geneID=FBgn0035665.2.path1;Name=FBgn0035665.2;Dir=sensecoverage=100.0;identity=99.3;matches=834;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013857
Chr1	stalkie_big_nohaplotig	exon	173783099	173783660	99	-	.	Parent=FBgn0035665.2.mrna1;Target=FBgn0035665.2 279 840 +
Chr1	stalkie_big_nohaplotig	exon	173783718	173783995	98	-	.	Parent=FBgn0035665.2.mrna1;Target=FBgn0035665.2 1 278 +
Chr1	stalkie_big_nohaplotig	CDS	173783099	173783660	.	-	1	Parent=FBgn0035665.2.mrna1;Target=FBgn0035665.2 279 840 +
Chr1	stalkie_big_nohaplotig	CDS	173783718	173783995	.	-	0	Parent=FBgn0035665.2.mrna1;Target=FBgn0035665.2 1 278 +
Chr1	gffcl	locus	173788141	173788824	.	+	.	ID=RLOC_00013858;geneIDs=comp153230_c0_seq1.path1;transcripts=comp153230_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173788141	173788824	.	+	.	ID=comp153230_c0_seq1.mrna1;geneID=comp153230_c0_seq1.path1;Name=comp153230_c0_seq1;Dir=sensecoverage=98.6;identity=100.0;matches=626;mismatches=0;indels=0;unknowns=0;Target=comp153230_c0_seq1 145 387 +;locus=RLOC_00013858
Chr1	stalkie_big_nohaplotig	exon	173788141	173788546	100	+	.	Parent=comp153230_c0_seq1.mrna1;Target=comp153230_c0_seq1 10 415 +
Chr1	stalkie_big_nohaplotig	exon	173788605	173788824	100	+	.	Parent=comp153230_c0_seq1.mrna1;Target=comp153230_c0_seq1 416 635 +
Chr1	stalkie_big_nohaplotig	CDS	173788276	173788518	.	+	0	Parent=comp153230_c0_seq1.mrna1
Chr1	gffcl	locus	173789858	173790838	.	-	.	ID=RLOC_00013859;geneIDs=FBgn0250815.2.path1;transcripts=FBgn0250815.2.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173789858	173790838	.	-	.	ID=FBgn0250815.2.mrna1;geneID=FBgn0250815.2.path1;Name=FBgn0250815.2;Dir=sensecoverage=100.0;identity=100.0;matches=855;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013859
Chr1	stalkie_big_nohaplotig	exon	173789858	173790183	100	-	.	Parent=FBgn0250815.2.mrna1;Target=FBgn0250815.2 530 855 +
Chr1	stalkie_big_nohaplotig	exon	173790249	173790505	100	-	.	Parent=FBgn0250815.2.mrna1;Target=FBgn0250815.2 273 529 +
Chr1	stalkie_big_nohaplotig	exon	173790567	173790838	100	-	.	Parent=FBgn0250815.2.mrna1;Target=FBgn0250815.2 1 272 +
Chr1	stalkie_big_nohaplotig	CDS	173789858	173790183	.	-	2	Parent=FBgn0250815.2.mrna1;Target=FBgn0250815.2 530 855 +
Chr1	stalkie_big_nohaplotig	CDS	173790249	173790505	.	-	1	Parent=FBgn0250815.2.mrna1;Target=FBgn0250815.2 273 529 +
Chr1	stalkie_big_nohaplotig	CDS	173790567	173790838	.	-	0	Parent=FBgn0250815.2.mrna1;Target=FBgn0250815.2 1 272 +
Chr1	gffcl	locus	173798371	173799244	.	+	.	ID=RLOC_00013860;geneIDs=FBgn0035665.1.path2;transcripts=FBgn0035665.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	173798371	173799244	.	+	.	ID=FBgn0035665.1.mrna2;geneID=FBgn0035665.1.path2;Name=FBgn0035665.1;Dir=sensecoverage=100.0;identity=100.0;matches=810;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013860
Chr1	stalkie_big_nohaplotig	exon	173798371	173798630	100	+	.	Parent=FBgn0035665.1.mrna2;Target=FBgn0035665.1 1 260 +
Chr1	stalkie_big_nohaplotig	exon	173798695	173799244	100	+	.	Parent=FBgn0035665.1.mrna2;Target=FBgn0035665.1 261 810 +
Chr1	stalkie_big_nohaplotig	CDS	173798371	173798630	.	+	0	Parent=FBgn0035665.1.mrna2;Target=FBgn0035665.1 1 260 +
Chr1	stalkie_big_nohaplotig	CDS	173798695	173799244	.	+	1	Parent=FBgn0035665.1.mrna2;Target=FBgn0035665.1 261 810 +
Chr1	gffcl	locus	173803542	173804417	.	+	.	ID=RLOC_00013861;geneIDs=FBgn0035665.4.path1;transcripts=FBgn0035665.4.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173803542	173804417	.	+	.	ID=FBgn0035665.4.mrna1;geneID=FBgn0035665.4.path1;Name=FBgn0035665.4;Dir=sensecoverage=100.0;identity=100.0;matches=798;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013861
Chr1	stalkie_big_nohaplotig	exon	173803542	173803786	100	+	.	Parent=FBgn0035665.4.mrna1;Target=FBgn0035665.4 1 245 +
Chr1	stalkie_big_nohaplotig	exon	173803865	173804417	100	+	.	Parent=FBgn0035665.4.mrna1;Target=FBgn0035665.4 246 798 +
Chr1	stalkie_big_nohaplotig	CDS	173803542	173803786	.	+	0	Parent=FBgn0035665.4.mrna1;Target=FBgn0035665.4 1 245 +
Chr1	stalkie_big_nohaplotig	CDS	173803865	173804417	.	+	1	Parent=FBgn0035665.4.mrna1;Target=FBgn0035665.4 246 798 +
Chr1	gffcl	locus	173805518	173806497	.	-	.	ID=RLOC_00013862;geneIDs=comp59933_c0_seq1.path1;transcripts=comp59933_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173805518	173806497	.	-	.	ID=comp59933_c0_seq1.mrna1;geneID=comp59933_c0_seq1.path1;Name=comp59933_c0_seq1;Dir=sensecoverage=99.8;identity=100.0;matches=908;mismatches=0;indels=0;unknowns=0;Target=comp59933_c0_seq1 117 449 +;locus=RLOC_00013862
Chr1	stalkie_big_nohaplotig	exon	173805518	173805920	100	-	.	Parent=comp59933_c0_seq1.mrna1;Target=comp59933_c0_seq1 506 908 +
Chr1	stalkie_big_nohaplotig	exon	173805993	173806497	100	-	.	Parent=comp59933_c0_seq1.mrna1;Target=comp59933_c0_seq1 1 505 +
Chr1	stalkie_big_nohaplotig	CDS	173806049	173806381	.	-	0	Parent=comp59933_c0_seq1.mrna1
Chr1	gffcl	locus	173807848	173815550	.	-	.	ID=RLOC_00013863;geneIDs=FBgn0040060.1.path1;transcripts=FBgn0040060.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173807848	173815550	.	-	.	ID=FBgn0040060.1.mrna1;geneID=FBgn0040060.1.path1;Name=FBgn0040060.1;Dir=antisensecoverage=100.0;identity=99.5;matches=794;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013863
Chr1	stalkie_big_nohaplotig	exon	173807848	173808077	99	-	.	Parent=FBgn0040060.1.mrna1;Target=FBgn0040060.1 1 230 -
Chr1	stalkie_big_nohaplotig	exon	173808143	173808490	99	-	.	Parent=FBgn0040060.1.mrna1;Target=FBgn0040060.1 231 578 -
Chr1	stalkie_big_nohaplotig	exon	173815331	173815550	100	-	.	Parent=FBgn0040060.1.mrna1;Target=FBgn0040060.1 579 798 -
Chr1	stalkie_big_nohaplotig	CDS	173808482	173808490	.	-	0	Parent=FBgn0040060.1.mrna1;Target=FBgn0040060.1 570 578 .
Chr1	stalkie_big_nohaplotig	CDS	173815331	173815549	.	-	0	Parent=FBgn0040060.1.mrna1;Target=FBgn0040060.1 579 797 .
Chr1	gffcl	locus	173810186	173811154	.	-	.	ID=RLOC_00013864;geneIDs=FBgn0035665.5.path1;transcripts=FBgn0035665.5.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173810186	173811154	.	-	.	ID=FBgn0035665.5.mrna1;geneID=FBgn0035665.5.path1;Name=FBgn0035665.5;Dir=sensecoverage=100.0;identity=100.0;matches=840;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013864
Chr1	stalkie_big_nohaplotig	exon	173810186	173810484	100	-	.	Parent=FBgn0035665.5.mrna1;Target=FBgn0035665.5 542 840 +
Chr1	stalkie_big_nohaplotig	exon	173810551	173810810	100	-	.	Parent=FBgn0035665.5.mrna1;Target=FBgn0035665.5 282 541 +
Chr1	stalkie_big_nohaplotig	exon	173810874	173811154	100	-	.	Parent=FBgn0035665.5.mrna1;Target=FBgn0035665.5 1 281 +
Chr1	stalkie_big_nohaplotig	CDS	173810186	173810484	.	-	2	Parent=FBgn0035665.5.mrna1;Target=FBgn0035665.5 542 840 +
Chr1	stalkie_big_nohaplotig	CDS	173810551	173810810	.	-	1	Parent=FBgn0035665.5.mrna1;Target=FBgn0035665.5 282 541 +
Chr1	stalkie_big_nohaplotig	CDS	173810874	173811154	.	-	0	Parent=FBgn0035665.5.mrna1;Target=FBgn0035665.5 1 281 +
Chr1	gffcl	locus	173818148	173819031	.	+	.	ID=RLOC_00013865;geneIDs=FBgn0035665.3.path1;transcripts=FBgn0035665.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173818148	173819031	.	+	.	ID=FBgn0035665.3.mrna1;geneID=FBgn0035665.3.path1;Name=FBgn0035665.3;Dir=sensecoverage=100.0;identity=99.7;matches=790;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013865
Chr1	stalkie_big_nohaplotig	exon	173818148	173818371	100	+	.	Parent=FBgn0035665.3.mrna1;Target=FBgn0035665.3 1 224 +
Chr1	stalkie_big_nohaplotig	exon	173818464	173819031	99	+	.	Parent=FBgn0035665.3.mrna1;Target=FBgn0035665.3 225 792 +
Chr1	stalkie_big_nohaplotig	CDS	173818148	173818371	.	+	0	Parent=FBgn0035665.3.mrna1;Target=FBgn0035665.3 1 224 +
Chr1	stalkie_big_nohaplotig	CDS	173818464	173819031	.	+	1	Parent=FBgn0035665.3.mrna1;Target=FBgn0035665.3 225 792 +
Chr1	gffcl	locus	173894648	173895330	.	-	.	ID=RLOC_00013866;geneIDs=comp154264_c0_seq1.path1;transcripts=comp154264_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173894648	173895330	.	-	.	ID=comp154264_c0_seq1.mrna1;geneID=comp154264_c0_seq1.path1;Name=comp154264_c0_seq1;Dir=indeterminatecoverage=97.7;identity=98.8;matches=675;mismatches=8;indels=0;unknowns=0;Target=comp154264_c0_seq1 686 4 .;CDS_Target=comp154264_c0_seq1 588 460 .;locus=RLOC_00013866
Chr1	stalkie_big_nohaplotig	exon	173894648	173895330	98	-	.	Parent=comp154264_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	173894746	173894874	.	-	0	Parent=comp154264_c0_seq1.mrna1
Chr1	gffcl	locus	173902544	173903162	.	-	.	ID=RLOC_00013867;geneIDs=comp162876_c0_seq1.path1;transcripts=comp162876_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173902544	173903162	.	-	.	ID=comp162876_c0_seq1.mrna1;geneID=comp162876_c0_seq1.path1;Name=comp162876_c0_seq1;Dir=sensecoverage=100.0;identity=98.9;matches=532;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013867
Chr1	stalkie_big_nohaplotig	exon	173902544	173902916	98	-	.	Parent=comp162876_c0_seq1.mrna1;Target=comp162876_c0_seq1 166 538 +
Chr1	stalkie_big_nohaplotig	exon	173902998	173903162	99	-	.	Parent=comp162876_c0_seq1.mrna1;Target=comp162876_c0_seq1 1 165 +
Chr1	stalkie_big_nohaplotig	CDS	173902697	173902916	.	-	1	Parent=comp162876_c0_seq1.mrna1;Target=comp162876_c0_seq1 166 385 +
Chr1	stalkie_big_nohaplotig	CDS	173902998	173903161	.	-	0	Parent=comp162876_c0_seq1.mrna1;Target=comp162876_c0_seq1 2 165 +
Chr1	gffcl	locus	173967286	173969042	.	-	.	ID=RLOC_00013869;geneIDs=ORF1209.path1;transcripts=ORF1209.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	173967286	173969042	.	-	.	ID=ORF1209.mrna1;geneID=ORF1209.path1;Name=ORF1209;Dir=sensecoverage=100.0;identity=99.1;matches=1174;mismatches=11;indels=0;unknowns=0;locus=RLOC_00013869
Chr1	stalkie_big_nohaplotig	exon	173967286	173967411	100	-	.	Parent=ORF1209.mrna1;Target=ORF1209 1060 1185 +
Chr1	stalkie_big_nohaplotig	exon	173967472	173967600	100	-	.	Parent=ORF1209.mrna1;Target=ORF1209 931 1059 +
Chr1	stalkie_big_nohaplotig	exon	173967671	173968191	98	-	.	Parent=ORF1209.mrna1;Target=ORF1209 410 930 +
Chr1	stalkie_big_nohaplotig	exon	173968255	173968320	96	-	.	Parent=ORF1209.mrna1;Target=ORF1209 344 409 +
Chr1	stalkie_big_nohaplotig	exon	173968398	173968627	99	-	.	Parent=ORF1209.mrna1;Target=ORF1209 114 343 +
Chr1	stalkie_big_nohaplotig	exon	173968930	173969042	99	-	.	Parent=ORF1209.mrna1;Target=ORF1209 1 113 +
Chr1	stalkie_big_nohaplotig	CDS	173967286	173967411	.	-	0	Parent=ORF1209.mrna1;Target=ORF1209 1060 1185 +
Chr1	stalkie_big_nohaplotig	CDS	173967472	173967600	.	-	0	Parent=ORF1209.mrna1;Target=ORF1209 931 1059 +
Chr1	stalkie_big_nohaplotig	CDS	173967671	173968191	.	-	2	Parent=ORF1209.mrna1;Target=ORF1209 410 930 +
Chr1	stalkie_big_nohaplotig	CDS	173968255	173968320	.	-	2	Parent=ORF1209.mrna1;Target=ORF1209 344 409 +
Chr1	stalkie_big_nohaplotig	CDS	173968398	173968627	.	-	1	Parent=ORF1209.mrna1;Target=ORF1209 114 343 +
Chr1	stalkie_big_nohaplotig	CDS	173968930	173969042	.	-	0	Parent=ORF1209.mrna1;Target=ORF1209 1 113 +
Chr1	gffcl	locus	174038274	174046416	.	+	.	ID=RLOC_00013870;geneIDs=comp154457_c0_seq1.path1;transcripts=comp154457_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174038274	174046416	.	+	.	ID=comp154457_c0_seq1.mrna1;geneID=comp154457_c0_seq1.path1;Name=comp154457_c0_seq1;Dir=sensecoverage=82.9;identity=99.5;matches=1939;mismatches=10;indels=0;unknowns=0;Target=comp154457_c0_seq1 565 792 +;locus=RLOC_00013870
Chr1	stalkie_big_nohaplotig	exon	174038274	174039413	99	+	.	Parent=comp154457_c0_seq1.mrna1;Target=comp154457_c0_seq1 404 1543 +
Chr1	stalkie_big_nohaplotig	exon	174045501	174045645	100	+	.	Parent=comp154457_c0_seq1.mrna1;Target=comp154457_c0_seq1 1544 1688 +
Chr1	stalkie_big_nohaplotig	exon	174045753	174046416	99	+	.	Parent=comp154457_c0_seq1.mrna1;Target=comp154457_c0_seq1 1689 2352 +
Chr1	stalkie_big_nohaplotig	CDS	174038435	174038662	.	+	0	Parent=comp154457_c0_seq1.mrna1
Chr1	gffcl	locus	174094273	174097611	.	-	.	ID=RLOC_00013871;geneIDs=FBgn0037031.1.path1;transcripts=FBgn0037031.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174094273	174097611	.	-	.	ID=FBgn0037031.1.mrna1;geneID=FBgn0037031.1.path1;Name=FBgn0037031.1;Dir=sensecoverage=91.7;identity=99.5;matches=1418;mismatches=7;indels=0;unknowns=0;locus=RLOC_00013871
Chr1	stalkie_big_nohaplotig	exon	174094273	174094340	100	-	.	Parent=FBgn0037031.1.mrna1;Target=FBgn0037031.1 1358 1425 +
Chr1	stalkie_big_nohaplotig	exon	174094408	174094603	100	-	.	Parent=FBgn0037031.1.mrna1;Target=FBgn0037031.1 1162 1357 +
Chr1	stalkie_big_nohaplotig	exon	174096207	174096314	100	-	.	Parent=FBgn0037031.1.mrna1;Target=FBgn0037031.1 1054 1161 +
Chr1	stalkie_big_nohaplotig	exon	174096387	174096679	98	-	.	Parent=FBgn0037031.1.mrna1;Target=FBgn0037031.1 761 1053 +
Chr1	stalkie_big_nohaplotig	exon	174096746	174096969	100	-	.	Parent=FBgn0037031.1.mrna1;Target=FBgn0037031.1 537 760 +
Chr1	stalkie_big_nohaplotig	exon	174097076	174097611	99	-	.	Parent=FBgn0037031.1.mrna1;Target=FBgn0037031.1 1 536 +
Chr1	stalkie_big_nohaplotig	CDS	174094273	174094340	.	-	2	Parent=FBgn0037031.1.mrna1;Target=FBgn0037031.1 1358 1425 +
Chr1	stalkie_big_nohaplotig	CDS	174094408	174094603	.	-	0	Parent=FBgn0037031.1.mrna1;Target=FBgn0037031.1 1162 1357 +
Chr1	stalkie_big_nohaplotig	CDS	174096207	174096314	.	-	0	Parent=FBgn0037031.1.mrna1;Target=FBgn0037031.1 1054 1161 +
Chr1	stalkie_big_nohaplotig	CDS	174096387	174096679	.	-	2	Parent=FBgn0037031.1.mrna1;Target=FBgn0037031.1 761 1053 +
Chr1	stalkie_big_nohaplotig	CDS	174096746	174096969	.	-	1	Parent=FBgn0037031.1.mrna1;Target=FBgn0037031.1 537 760 +
Chr1	stalkie_big_nohaplotig	CDS	174097076	174097611	.	-	0	Parent=FBgn0037031.1.mrna1;Target=FBgn0037031.1 1 536 +
Chr1	gffcl	locus	174098860	174101377	.	+	.	ID=RLOC_00013872;geneIDs=FBgn0027055.1.path1;transcripts=FBgn0027055.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174098860	174101377	.	+	.	ID=FBgn0027055.1.mrna1;geneID=FBgn0027055.1.path1;Name=FBgn0027055.1;Dir=sensecoverage=100.0;identity=99.9;matches=1372;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013872
Chr1	stalkie_big_nohaplotig	exon	174098860	174098971	100	+	.	Parent=FBgn0027055.1.mrna1;Target=FBgn0027055.1 1 112 +
Chr1	stalkie_big_nohaplotig	exon	174099063	174099217	100	+	.	Parent=FBgn0027055.1.mrna1;Target=FBgn0027055.1 113 267 +
Chr1	stalkie_big_nohaplotig	exon	174099269	174099365	100	+	.	Parent=FBgn0027055.1.mrna1;Target=FBgn0027055.1 268 364 +
Chr1	stalkie_big_nohaplotig	exon	174099447	174099691	100	+	.	Parent=FBgn0027055.1.mrna1;Target=FBgn0027055.1 365 609 +
Chr1	stalkie_big_nohaplotig	exon	174099779	174099973	100	+	.	Parent=FBgn0027055.1.mrna1;Target=FBgn0027055.1 610 804 +
Chr1	stalkie_big_nohaplotig	exon	174100042	174100221	99	+	.	Parent=FBgn0027055.1.mrna1;Target=FBgn0027055.1 805 984 +
Chr1	stalkie_big_nohaplotig	exon	174100787	174100918	100	+	.	Parent=FBgn0027055.1.mrna1;Target=FBgn0027055.1 985 1116 +
Chr1	stalkie_big_nohaplotig	exon	174100988	174101170	99	+	.	Parent=FBgn0027055.1.mrna1;Target=FBgn0027055.1 1117 1299 +
Chr1	stalkie_big_nohaplotig	exon	174101237	174101298	100	+	.	Parent=FBgn0027055.1.mrna1;Target=FBgn0027055.1 1300 1361 +
Chr1	stalkie_big_nohaplotig	exon	174101365	174101377	100	+	.	Parent=FBgn0027055.1.mrna1;Target=FBgn0027055.1 1362 1374 +
Chr1	stalkie_big_nohaplotig	CDS	174098860	174098971	.	+	0	Parent=FBgn0027055.1.mrna1;Target=FBgn0027055.1 1 112 +
Chr1	stalkie_big_nohaplotig	CDS	174099063	174099217	.	+	2	Parent=FBgn0027055.1.mrna1;Target=FBgn0027055.1 113 267 +
Chr1	stalkie_big_nohaplotig	CDS	174099269	174099365	.	+	0	Parent=FBgn0027055.1.mrna1;Target=FBgn0027055.1 268 364 +
Chr1	stalkie_big_nohaplotig	CDS	174099447	174099691	.	+	2	Parent=FBgn0027055.1.mrna1;Target=FBgn0027055.1 365 609 +
Chr1	stalkie_big_nohaplotig	CDS	174099779	174099973	.	+	0	Parent=FBgn0027055.1.mrna1;Target=FBgn0027055.1 610 804 +
Chr1	stalkie_big_nohaplotig	CDS	174100042	174100221	.	+	0	Parent=FBgn0027055.1.mrna1;Target=FBgn0027055.1 805 984 +
Chr1	stalkie_big_nohaplotig	CDS	174100787	174100918	.	+	0	Parent=FBgn0027055.1.mrna1;Target=FBgn0027055.1 985 1116 +
Chr1	stalkie_big_nohaplotig	CDS	174100988	174101170	.	+	0	Parent=FBgn0027055.1.mrna1;Target=FBgn0027055.1 1117 1299 +
Chr1	stalkie_big_nohaplotig	CDS	174101237	174101298	.	+	0	Parent=FBgn0027055.1.mrna1;Target=FBgn0027055.1 1300 1361 +
Chr1	stalkie_big_nohaplotig	CDS	174101365	174101377	.	+	1	Parent=FBgn0027055.1.mrna1;Target=FBgn0027055.1 1362 1374 +
Chr1	gffcl	locus	174115337	174116166	.	-	.	ID=RLOC_00013873;geneIDs=comp138810_c0_seq1.path1;transcripts=comp138810_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174115337	174116166	.	-	.	ID=comp138810_c0_seq1.mrna1;geneID=comp138810_c0_seq1.path1;Name=comp138810_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.4;matches=788;mismatches=41;indels=6;unknowns=0;Target=comp138810_c0_seq1 834 1 .;CDS_Target=comp138810_c0_seq1 347 279 .;locus=RLOC_00013873
Chr1	stalkie_big_nohaplotig	exon	174115337	174116166	94	-	.	Parent=comp138810_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	174115824	174115888	.	-	0	Parent=comp138810_c0_seq1.mrna1
Chr1	gffcl	locus	174166771	174456126	.	+	.	ID=RLOC_00013874;geneIDs=comp161724_c0_seq1.path1;transcripts=comp161724_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174166771	174456126	.	+	.	ID=comp161724_c0_seq1.mrna1;geneID=comp161724_c0_seq1.path1;Name=comp161724_c0_seq1;Dir=indeterminatecoverage=74.7;identity=82.1;matches=449;mismatches=33;indels=65;unknowns=0;locus=RLOC_00013874
Chr1	stalkie_big_nohaplotig	exon	174166771	174166778	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 310 303 .
Chr1	stalkie_big_nohaplotig	exon	174166797	174166803	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 334 328 .
Chr1	stalkie_big_nohaplotig	exon	174167661	174167707	58	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 386 335 .
Chr1	stalkie_big_nohaplotig	exon	174220664	174220672	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 395 387 .
Chr1	stalkie_big_nohaplotig	exon	174221511	174221515	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 400 396 .
Chr1	stalkie_big_nohaplotig	exon	174231137	174231148	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 412 401 .
Chr1	stalkie_big_nohaplotig	exon	174246771	174246776	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 446 441 .
Chr1	stalkie_big_nohaplotig	exon	174254013	174254014	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 448 447 .
Chr1	stalkie_big_nohaplotig	exon	174269703	174269711	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 457 449 .
Chr1	stalkie_big_nohaplotig	exon	174272916	174272924	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 466 458 .
Chr1	stalkie_big_nohaplotig	exon	174272936	174272944	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 507 499 .
Chr1	stalkie_big_nohaplotig	exon	174281133	174281140	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 520 513 .
Chr1	stalkie_big_nohaplotig	exon	174287322	174287456	87	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 655 521 .
Chr1	stalkie_big_nohaplotig	exon	174294958	174294962	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 661 657 .
Chr1	stalkie_big_nohaplotig	exon	174296021	174296025	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 666 662 .
Chr1	stalkie_big_nohaplotig	exon	174320005	174320010	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 672 667 .
Chr1	stalkie_big_nohaplotig	exon	174324607	174324609	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 675 673 .
Chr1	stalkie_big_nohaplotig	exon	174326316	174326318	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 678 676 .
Chr1	stalkie_big_nohaplotig	exon	174329144	174329155	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 690 679 .
Chr1	stalkie_big_nohaplotig	exon	174360511	174360566	33	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 734 716 .
Chr1	stalkie_big_nohaplotig	exon	174360568	174360578	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 765 755 .
Chr1	stalkie_big_nohaplotig	exon	174386288	174386295	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 838 831 .
Chr1	stalkie_big_nohaplotig	exon	174386351	174386353	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 898 896 .
Chr1	stalkie_big_nohaplotig	exon	174388033	174388037	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 903 899 .
Chr1	stalkie_big_nohaplotig	exon	174389775	174389781	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 910 904 .
Chr1	stalkie_big_nohaplotig	exon	174390134	174390170	45	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 927 911 .
Chr1	stalkie_big_nohaplotig	exon	174413545	174413553	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 944 936 .
Chr1	stalkie_big_nohaplotig	exon	174416405	174416406	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 950 949 .
Chr1	stalkie_big_nohaplotig	exon	174429240	174429249	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 961 952 .
Chr1	stalkie_big_nohaplotig	exon	174434740	174434747	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 975 968 .
Chr1	stalkie_big_nohaplotig	exon	174435533	174435537	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 980 976 .
Chr1	stalkie_big_nohaplotig	exon	174440572	174440581	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 990 981 .
Chr1	stalkie_big_nohaplotig	exon	174456028	174456038	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 1001 991 .
Chr1	stalkie_big_nohaplotig	exon	174456058	174456065	100	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 1036 1029 .
Chr1	stalkie_big_nohaplotig	exon	174456082	174456126	95	+	.	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 1195 1150 .
Chr1	stalkie_big_nohaplotig	CDS	174287360	174287456	.	+	0	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 655 559 .
Chr1	stalkie_big_nohaplotig	CDS	174294958	174294962	.	+	2	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 661 657 .
Chr1	stalkie_big_nohaplotig	CDS	174296021	174296025	.	+	0	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 666 662 .
Chr1	stalkie_big_nohaplotig	CDS	174320005	174320010	.	+	1	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 672 667 .
Chr1	stalkie_big_nohaplotig	CDS	174324607	174324609	.	+	1	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 675 673 .
Chr1	stalkie_big_nohaplotig	CDS	174326316	174326318	.	+	1	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 678 676 .
Chr1	stalkie_big_nohaplotig	CDS	174329144	174329155	.	+	1	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 690 679 .
Chr1	stalkie_big_nohaplotig	CDS	174360511	174360566	.	+	1	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 734 716 .
Chr1	stalkie_big_nohaplotig	CDS	174360568	174360578	.	+	2	Parent=comp161724_c0_seq1.mrna1;Target=comp161724_c0_seq1 765 755 .
Chr1	gffcl	locus	174174236	174175828	.	-	.	ID=RLOC_00013875;geneIDs=FBgn0263392.path1,comp152163_c0_seq1.path1;transcripts=FBgn0263392.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174174236	174175828	.	-	.	ID=FBgn0263392.mrna1;geneID=FBgn0263392.path1;Name=FBgn0263392;Dir=sensecoverage=81.9;identity=99.9;matches=1517;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013875
Chr1	stalkie_big_nohaplotig	exon	174174236	174174377	99	-	.	Parent=FBgn0263392.mrna1;Target=FBgn0263392 1378 1519 +
Chr1	stalkie_big_nohaplotig	exon	174174452	174175828	99	-	.	Parent=FBgn0263392.mrna1;Target=FBgn0263392 1 1377 +
Chr1	stalkie_big_nohaplotig	CDS	174174237	174174377	.	-	0	Parent=FBgn0263392.mrna1;Target=FBgn0263392 1378 1518 +
Chr1	stalkie_big_nohaplotig	CDS	174174452	174175828	.	-	0	Parent=FBgn0263392.mrna1;Target=FBgn0263392 1 1377 +
Chr1	gffcl	locus	174221101	174247985	.	-	.	ID=RLOC_00013876;geneIDs=FBgn0035379.1.path1;transcripts=FBgn0035379.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174221101	174247985	.	-	.	ID=FBgn0035379.1.mrna1;geneID=FBgn0035379.1.path1;Name=FBgn0035379.1;Dir=sensecoverage=98.7;identity=99.4;matches=1163;mismatches=6;indels=1;unknowns=0;Target=FBgn0035379.1 18 53 +;locus=RLOC_00013876
Chr1	stalkie_big_nohaplotig	exon	174221101	174221266	100	-	.	Parent=FBgn0035379.1.mrna1;Target=FBgn0035379.1 1020 1185 +
Chr1	stalkie_big_nohaplotig	exon	174234301	174234762	99	-	.	Parent=FBgn0035379.1.mrna1;Target=FBgn0035379.1 558 1019 +
Chr1	stalkie_big_nohaplotig	exon	174234849	174235124	99	-	.	Parent=FBgn0035379.1.mrna1;Target=FBgn0035379.1 282 557 +
Chr1	stalkie_big_nohaplotig	exon	174239790	174239941	100	-	.	Parent=FBgn0035379.1.mrna1;Target=FBgn0035379.1 130 281 +
Chr1	stalkie_big_nohaplotig	exon	174247873	174247985	98	-	.	Parent=FBgn0035379.1.mrna1;Target=FBgn0035379.1 16 129 +
Chr1	stalkie_big_nohaplotig	CDS	174247949	174247983	.	-	0	Parent=FBgn0035379.1.mrna1
Chr1	gffcl	locus	174420054	174422123	.	-	.	ID=RLOC_00013877;geneIDs=ORF3277.path1,comp160077_c0_seq1.path1;transcripts=comp160077_c0_seq1.mrna1,ORF3277.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174420054	174422123	.	-	.	ID=comp160077_c0_seq1.mrna1;geneID=comp160077_c0_seq1.path1;Name=comp160077_c0_seq1;Dir=antisensecoverage=98.3;identity=96.4;matches=927;mismatches=31;indels=4;unknowns=0;locus=RLOC_00013877
Chr1	stalkie_big_nohaplotig	exon	174420054	174420313	96	-	.	Parent=comp160077_c0_seq1.mrna1;Target=comp160077_c0_seq1 10 270 -
Chr1	stalkie_big_nohaplotig	exon	174420382	174420742	95	-	.	Parent=comp160077_c0_seq1.mrna1;Target=comp160077_c0_seq1 271 628 -
Chr1	stalkie_big_nohaplotig	exon	174420803	174420949	99	-	.	Parent=comp160077_c0_seq1.mrna1;Target=comp160077_c0_seq1 629 775 -
Chr1	stalkie_big_nohaplotig	exon	174421931	174422123	96	-	.	Parent=comp160077_c0_seq1.mrna1;Target=comp160077_c0_seq1 776 968 -
Chr1	stalkie_big_nohaplotig	CDS	174420494	174420742	.	-	0	Parent=comp160077_c0_seq1.mrna1;Target=comp160077_c0_seq1 383 628 .
Chr1	stalkie_big_nohaplotig	CDS	174420803	174420949	.	-	0	Parent=comp160077_c0_seq1.mrna1;Target=comp160077_c0_seq1 629 775 .
Chr1	stalkie_big_nohaplotig	CDS	174421931	174422023	.	-	0	Parent=comp160077_c0_seq1.mrna1;Target=comp160077_c0_seq1 776 868 .
Chr1	stalkie_big_nohaplotig	mRNA	174420107	174422023	.	-	.	ID=ORF3277.mrna1;geneID=ORF3277.path1;Name=ORF3277;Dir=sensecoverage=100.0;identity=96.9;matches=730;mismatches=20;indels=3;unknowns=0;locus=RLOC_00013877
Chr1	stalkie_big_nohaplotig	exon	174420107	174420313	97	-	.	Parent=ORF3277.mrna1;Target=ORF3277 544 750 +
Chr1	stalkie_big_nohaplotig	exon	174420382	174420516	96	-	.	Parent=ORF3277.mrna1;Target=ORF3277 409 543 +
Chr1	stalkie_big_nohaplotig	exon	174420572	174420742	94	-	.	Parent=ORF3277.mrna1;Target=ORF3277 241 408 +
Chr1	stalkie_big_nohaplotig	exon	174420803	174420949	99	-	.	Parent=ORF3277.mrna1;Target=ORF3277 94 240 +
Chr1	stalkie_big_nohaplotig	exon	174421931	174422023	98	-	.	Parent=ORF3277.mrna1;Target=ORF3277 1 93 +
Chr1	stalkie_big_nohaplotig	CDS	174420107	174420313	.	-	0	Parent=ORF3277.mrna1;Target=ORF3277 544 750 +
Chr1	stalkie_big_nohaplotig	CDS	174420382	174420516	.	-	0	Parent=ORF3277.mrna1;Target=ORF3277 409 543 +
Chr1	stalkie_big_nohaplotig	CDS	174420572	174420742	.	-	0	Parent=ORF3277.mrna1;Target=ORF3277 241 408 +
Chr1	stalkie_big_nohaplotig	CDS	174420803	174420949	.	-	0	Parent=ORF3277.mrna1;Target=ORF3277 94 240 +
Chr1	stalkie_big_nohaplotig	CDS	174421931	174422023	.	-	0	Parent=ORF3277.mrna1;Target=ORF3277 1 93 +
Chr1	gffcl	locus	174446527	174446954	.	-	.	ID=RLOC_00013878;geneIDs=comp114641_c0_seq1.path1;transcripts=comp114641_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174446527	174446954	.	-	.	ID=comp114641_c0_seq1.mrna1;geneID=comp114641_c0_seq1.path1;Name=comp114641_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=428;mismatches=0;indels=0;unknowns=0;Target=comp114641_c0_seq1 428 1 .;CDS_Target=comp114641_c0_seq1 240 118 .;locus=RLOC_00013878
Chr1	stalkie_big_nohaplotig	exon	174446527	174446954	100	-	.	Parent=comp114641_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	174446715	174446837	.	-	0	Parent=comp114641_c0_seq1.mrna1
Chr1	gffcl	locus	174447258	174454350	.	+	.	ID=RLOC_00013879;geneIDs=FBgn0260657.1.path2;transcripts=FBgn0260657.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	174447258	174454350	.	+	.	ID=FBgn0260657.1.mrna2;geneID=FBgn0260657.1.path2;Name=FBgn0260657.1;Dir=sensecoverage=57.2;identity=100.0;matches=609;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013879
Chr1	stalkie_big_nohaplotig	exon	174447258	174447461	100	+	.	Parent=FBgn0260657.1.mrna2;Target=FBgn0260657.1 457 660 +
Chr1	stalkie_big_nohaplotig	exon	174450072	174450127	100	+	.	Parent=FBgn0260657.1.mrna2;Target=FBgn0260657.1 661 716 +
Chr1	stalkie_big_nohaplotig	exon	174453942	174454122	100	+	.	Parent=FBgn0260657.1.mrna2;Target=FBgn0260657.1 717 897 +
Chr1	stalkie_big_nohaplotig	exon	174454183	174454350	100	+	.	Parent=FBgn0260657.1.mrna2;Target=FBgn0260657.1 898 1065 +
Chr1	stalkie_big_nohaplotig	CDS	174447258	174447461	.	+	0	Parent=FBgn0260657.1.mrna2;Target=FBgn0260657.1 457 660 +
Chr1	stalkie_big_nohaplotig	CDS	174450072	174450127	.	+	0	Parent=FBgn0260657.1.mrna2;Target=FBgn0260657.1 661 716 +
Chr1	stalkie_big_nohaplotig	CDS	174453942	174454122	.	+	1	Parent=FBgn0260657.1.mrna2;Target=FBgn0260657.1 717 897 +
Chr1	stalkie_big_nohaplotig	CDS	174454183	174454350	.	+	0	Parent=FBgn0260657.1.mrna2;Target=FBgn0260657.1 898 1065 +
Chr1	gffcl	locus	174452819	174461220	.	.	.	ID=RLOC_00013880;geneIDs=comp114844_c0_seq1.path1,comp145218_c0_seq1.path1,comp150322_c0_seq1.path1;transcripts=comp114844_c0_seq1.mrna1,comp145218_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174452819	174461220	.	+	.	ID=comp114844_c0_seq1.mrna1;geneID=comp114844_c0_seq1.path1;Name=comp114844_c0_seq1;Dir=indeterminatecoverage=94.5;identity=86.2;matches=668;mismatches=33;indels=74;unknowns=0;Target=comp114844_c0_seq1 493 392 .;locus=RLOC_00013880
Chr1	stalkie_big_nohaplotig	exon	174452819	174452834	87	+	.	Parent=comp114844_c0_seq1.mrna1;Target=comp114844_c0_seq1 62 47 .
Chr1	stalkie_big_nohaplotig	exon	174455420	174455425	100	+	.	Parent=comp114844_c0_seq1.mrna1;Target=comp114844_c0_seq1 68 63 .
Chr1	stalkie_big_nohaplotig	exon	174455482	174455525	56	+	.	Parent=comp114844_c0_seq1.mrna1;Target=comp114844_c0_seq1 133 69 .
Chr1	stalkie_big_nohaplotig	exon	174458543	174458554	75	+	.	Parent=comp114844_c0_seq1.mrna1;Target=comp114844_c0_seq1 144 134 .
Chr1	stalkie_big_nohaplotig	exon	174459089	174459132	50	+	.	Parent=comp114844_c0_seq1.mrna1;Target=comp114844_c0_seq1 214 145 .
Chr1	stalkie_big_nohaplotig	exon	174459932	174459945	78	+	.	Parent=comp114844_c0_seq1.mrna1;Target=comp114844_c0_seq1 248 237 .
Chr1	stalkie_big_nohaplotig	exon	174460288	174460329	50	+	.	Parent=comp114844_c0_seq1.mrna1;Target=comp114844_c0_seq1 311 249 .
Chr1	stalkie_big_nohaplotig	exon	174460388	174460397	100	+	.	Parent=comp114844_c0_seq1.mrna1;Target=comp114844_c0_seq1 321 312 .
Chr1	stalkie_big_nohaplotig	exon	174460703	174461220	99	+	.	Parent=comp114844_c0_seq1.mrna1;Target=comp114844_c0_seq1 838 322 .
Chr1	stalkie_big_nohaplotig	CDS	174460773	174460874	.	+	0	Parent=comp114844_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174459736	174459953	.	-	.	ID=comp145218_c0_seq1.mrna1;geneID=comp145218_c0_seq1.path1;Name=comp145218_c0_seq1;Dir=indeterminatecoverage=94.0;identity=98.2;matches=214;mismatches=4;indels=0;unknowns=0;Target=comp145218_c0_seq1 218 1 .;CDS_Target=comp145218_c0_seq1 174 106 .;locus=RLOC_00013880
Chr1	stalkie_big_nohaplotig	exon	174459736	174459953	98	-	.	Parent=comp145218_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	174459780	174459848	.	-	0	Parent=comp145218_c0_seq1.mrna1
Chr1	gffcl	locus	174457680	174457926	.	-	.	ID=RLOC_00013881;geneIDs=comp90889_c0_seq1.path1;transcripts=comp90889_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174457680	174457926	.	-	.	ID=comp90889_c0_seq1.mrna1;geneID=comp90889_c0_seq1.path1;Name=comp90889_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.9;matches=234;mismatches=6;indels=12;unknowns=0;Target=comp90889_c0_seq1 245 1 .;CDS_Target=comp90889_c0_seq1 71 3 .;locus=RLOC_00013881
Chr1	stalkie_big_nohaplotig	exon	174457680	174457926	92	-	.	Parent=comp90889_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	174457856	174457924	.	-	0	Parent=comp90889_c0_seq1.mrna1
Chr1	gffcl	locus	174508002	174508273	.	+	.	ID=RLOC_00013882;geneIDs=comp134718_c1_seq1.path2;transcripts=comp134718_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	174508002	174508273	.	+	.	ID=comp134718_c1_seq1.mrna2;geneID=comp134718_c1_seq1.path2;Name=comp134718_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=272;mismatches=0;indels=0;unknowns=0;Target=comp134718_c1_seq1 272 1 .;CDS_Target=comp134718_c1_seq1 99 1 .;locus=RLOC_00013882
Chr1	stalkie_big_nohaplotig	exon	174508002	174508273	100	+	.	Parent=comp134718_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	174508002	174508100	.	+	0	Parent=comp134718_c1_seq1.mrna2
Chr1	gffcl	locus	174513031	174592565	.	-	.	ID=RLOC_00013883;geneIDs=FBgn0260657.1.path1;transcripts=FBgn0260657.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174513031	174592565	.	-	.	ID=FBgn0260657.1.mrna1;geneID=FBgn0260657.1.path1;Name=FBgn0260657.1;Dir=sensecoverage=42.8;identity=100.0;matches=456;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013883
Chr1	stalkie_big_nohaplotig	exon	174513031	174513113	100	-	.	Parent=FBgn0260657.1.mrna1;Target=FBgn0260657.1 374 456 +
Chr1	stalkie_big_nohaplotig	exon	174514928	174515000	100	-	.	Parent=FBgn0260657.1.mrna1;Target=FBgn0260657.1 301 373 +
Chr1	stalkie_big_nohaplotig	exon	174515344	174515453	100	-	.	Parent=FBgn0260657.1.mrna1;Target=FBgn0260657.1 191 300 +
Chr1	stalkie_big_nohaplotig	exon	174579330	174579344	100	-	.	Parent=FBgn0260657.1.mrna1;Target=FBgn0260657.1 176 190 +
Chr1	stalkie_big_nohaplotig	exon	174580177	174580276	100	-	.	Parent=FBgn0260657.1.mrna1;Target=FBgn0260657.1 76 175 +
Chr1	stalkie_big_nohaplotig	exon	174592491	174592565	100	-	.	Parent=FBgn0260657.1.mrna1;Target=FBgn0260657.1 1 75 +
Chr1	stalkie_big_nohaplotig	CDS	174513031	174513113	.	-	2	Parent=FBgn0260657.1.mrna1;Target=FBgn0260657.1 374 456 +
Chr1	stalkie_big_nohaplotig	CDS	174514928	174515000	.	-	0	Parent=FBgn0260657.1.mrna1;Target=FBgn0260657.1 301 373 +
Chr1	stalkie_big_nohaplotig	CDS	174515344	174515453	.	-	2	Parent=FBgn0260657.1.mrna1;Target=FBgn0260657.1 191 300 +
Chr1	stalkie_big_nohaplotig	CDS	174579330	174579344	.	-	2	Parent=FBgn0260657.1.mrna1;Target=FBgn0260657.1 176 190 +
Chr1	stalkie_big_nohaplotig	CDS	174580177	174580276	.	-	0	Parent=FBgn0260657.1.mrna1;Target=FBgn0260657.1 76 175 +
Chr1	stalkie_big_nohaplotig	CDS	174592491	174592565	.	-	0	Parent=FBgn0260657.1.mrna1;Target=FBgn0260657.1 1 75 +
Chr1	gffcl	locus	174517961	174519591	.	+	.	ID=RLOC_00013884;geneIDs=comp160182_c0_seq1.path1;transcripts=comp160182_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174517961	174519591	.	+	.	ID=comp160182_c0_seq1.mrna1;geneID=comp160182_c0_seq1.path1;Name=comp160182_c0_seq1;Dir=antisensecoverage=99.7;identity=97.3;matches=733;mismatches=17;indels=3;unknowns=0;Target=comp160182_c0_seq1 13 195 .;locus=RLOC_00013884
Chr1	stalkie_big_nohaplotig	exon	174517961	174518052	100	+	.	Parent=comp160182_c0_seq1.mrna1;Target=comp160182_c0_seq1 661 752 -
Chr1	stalkie_big_nohaplotig	exon	174518103	174518177	100	+	.	Parent=comp160182_c0_seq1.mrna1;Target=comp160182_c0_seq1 586 660 -
Chr1	stalkie_big_nohaplotig	exon	174518229	174518335	96	+	.	Parent=comp160182_c0_seq1.mrna1;Target=comp160182_c0_seq1 479 585 -
Chr1	stalkie_big_nohaplotig	exon	174518392	174518491	94	+	.	Parent=comp160182_c0_seq1.mrna1;Target=comp160182_c0_seq1 382 478 -
Chr1	stalkie_big_nohaplotig	exon	174518796	174518871	100	+	.	Parent=comp160182_c0_seq1.mrna1;Target=comp160182_c0_seq1 306 381 -
Chr1	stalkie_big_nohaplotig	exon	174518927	174518983	85	+	.	Parent=comp160182_c0_seq1.mrna1;Target=comp160182_c0_seq1 249 305 -
Chr1	stalkie_big_nohaplotig	exon	174519206	174519246	100	+	.	Parent=comp160182_c0_seq1.mrna1;Target=comp160182_c0_seq1 208 248 -
Chr1	stalkie_big_nohaplotig	exon	174519387	174519591	99	+	.	Parent=comp160182_c0_seq1.mrna1;Target=comp160182_c0_seq1 3 207 -
Chr1	stalkie_big_nohaplotig	CDS	174519399	174519581	.	+	0	Parent=comp160182_c0_seq1.mrna1
Chr1	gffcl	locus	174526427	174527182	.	-	.	ID=RLOC_00013885;geneIDs=FBgn0015218.1.path1;transcripts=FBgn0015218.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174526427	174527182	.	-	.	ID=FBgn0015218.1.mrna1;geneID=FBgn0015218.1.path1;Name=FBgn0015218.1;Dir=indeterminatecoverage=99.2;identity=99.7;matches=754;mismatches=2;indels=0;unknowns=0;Target=FBgn0015218.1 762 7 .;locus=RLOC_00013885
Chr1	stalkie_big_nohaplotig	exon	174526427	174527182	99	-	.	Parent=FBgn0015218.1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	174526427	174527182	.	-	0	Parent=FBgn0015218.1.mrna1
Chr1	gffcl	locus	174533174	174533821	.	+	.	ID=RLOC_00013886;geneIDs=FBgn0030050.6.path1;transcripts=FBgn0030050.6.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174533174	174533821	.	+	.	ID=FBgn0030050.6.mrna1;geneID=FBgn0030050.6.path1;Name=FBgn0030050.6;Dir=sensecoverage=100.0;identity=98.9;matches=549;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013886
Chr1	stalkie_big_nohaplotig	exon	174533174	174533362	99	+	.	Parent=FBgn0030050.6.mrna1;Target=FBgn0030050.6 1 189 +
Chr1	stalkie_big_nohaplotig	exon	174533456	174533821	98	+	.	Parent=FBgn0030050.6.mrna1;Target=FBgn0030050.6 190 555 +
Chr1	stalkie_big_nohaplotig	CDS	174533174	174533362	.	+	0	Parent=FBgn0030050.6.mrna1;Target=FBgn0030050.6 1 189 +
Chr1	stalkie_big_nohaplotig	CDS	174533456	174533821	.	+	0	Parent=FBgn0030050.6.mrna1;Target=FBgn0030050.6 190 555 +
Chr1	gffcl	locus	174635353	174641111	.	-	.	ID=RLOC_00013887;geneIDs=FBgn0032769.3.path1;transcripts=FBgn0032769.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174635353	174641111	.	-	.	ID=FBgn0032769.3.mrna1;geneID=FBgn0032769.3.path1;Name=FBgn0032769.3;Dir=sensecoverage=100.0;identity=99.5;matches=1087;mismatches=5;indels=0;unknowns=0;locus=RLOC_00013887
Chr1	stalkie_big_nohaplotig	exon	174635353	174635465	100	-	.	Parent=FBgn0032769.3.mrna1;Target=FBgn0032769.3 980 1092 +
Chr1	stalkie_big_nohaplotig	exon	174635522	174635809	100	-	.	Parent=FBgn0032769.3.mrna1;Target=FBgn0032769.3 692 979 +
Chr1	stalkie_big_nohaplotig	exon	174635880	174636334	99	-	.	Parent=FBgn0032769.3.mrna1;Target=FBgn0032769.3 237 691 +
Chr1	stalkie_big_nohaplotig	exon	174636392	174636555	99	-	.	Parent=FBgn0032769.3.mrna1;Target=FBgn0032769.3 73 236 +
Chr1	stalkie_big_nohaplotig	exon	174641040	174641111	98	-	.	Parent=FBgn0032769.3.mrna1;Target=FBgn0032769.3 1 72 +
Chr1	stalkie_big_nohaplotig	CDS	174635353	174635465	.	-	2	Parent=FBgn0032769.3.mrna1;Target=FBgn0032769.3 980 1092 +
Chr1	stalkie_big_nohaplotig	CDS	174635522	174635809	.	-	2	Parent=FBgn0032769.3.mrna1;Target=FBgn0032769.3 692 979 +
Chr1	stalkie_big_nohaplotig	CDS	174635880	174636334	.	-	1	Parent=FBgn0032769.3.mrna1;Target=FBgn0032769.3 237 691 +
Chr1	stalkie_big_nohaplotig	CDS	174636392	174636555	.	-	0	Parent=FBgn0032769.3.mrna1;Target=FBgn0032769.3 73 236 +
Chr1	stalkie_big_nohaplotig	CDS	174641040	174641111	.	-	0	Parent=FBgn0032769.3.mrna1;Target=FBgn0032769.3 1 72 +
Chr1	gffcl	locus	174641333	174643323	.	-	.	ID=RLOC_00013888;geneIDs=comp148291_c0_seq1.path1;transcripts=comp148291_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174641333	174643323	.	-	.	ID=comp148291_c0_seq1.mrna1;geneID=comp148291_c0_seq1.path1;Name=comp148291_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=286;mismatches=0;indels=0;unknowns=0;Target=comp148291_c0_seq1 106 153 .;locus=RLOC_00013888
Chr1	stalkie_big_nohaplotig	exon	174641333	174641527	100	-	.	Parent=comp148291_c0_seq1.mrna1;Target=comp148291_c0_seq1 1 195 -
Chr1	stalkie_big_nohaplotig	exon	174643233	174643323	100	-	.	Parent=comp148291_c0_seq1.mrna1;Target=comp148291_c0_seq1 196 286 -
Chr1	stalkie_big_nohaplotig	CDS	174641438	174641485	.	-	0	Parent=comp148291_c0_seq1.mrna1
Chr1	gffcl	locus	174646067	174647683	.	-	.	ID=RLOC_00013889;geneIDs=comp153946_c0_seq1.path1;transcripts=comp153946_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174646067	174647683	.	-	.	ID=comp153946_c0_seq1.mrna1;geneID=comp153946_c0_seq1.path1;Name=comp153946_c0_seq1;Dir=sensecoverage=100.0;identity=98.2;matches=928;mismatches=16;indels=1;unknowns=0;locus=RLOC_00013889
Chr1	stalkie_big_nohaplotig	exon	174646067	174646224	98	-	.	Parent=comp153946_c0_seq1.mrna1;Target=comp153946_c0_seq1 788 944 +
Chr1	stalkie_big_nohaplotig	exon	174646303	174646843	97	-	.	Parent=comp153946_c0_seq1.mrna1;Target=comp153946_c0_seq1 247 787 +
Chr1	stalkie_big_nohaplotig	exon	174646996	174647140	100	-	.	Parent=comp153946_c0_seq1.mrna1;Target=comp153946_c0_seq1 102 246 +
Chr1	stalkie_big_nohaplotig	exon	174647583	174647683	99	-	.	Parent=comp153946_c0_seq1.mrna1;Target=comp153946_c0_seq1 1 101 +
Chr1	stalkie_big_nohaplotig	CDS	174646414	174646843	.	-	1	Parent=comp153946_c0_seq1.mrna1;Target=comp153946_c0_seq1 247 676 +
Chr1	stalkie_big_nohaplotig	CDS	174646996	174647012	.	-	0	Parent=comp153946_c0_seq1.mrna1;Target=comp153946_c0_seq1 230 246 +
Chr1	gffcl	locus	174669041	174670082	.	+	.	ID=RLOC_00013890;geneIDs=comp111290_c0_seq1.path1;transcripts=comp111290_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174669041	174670082	.	+	.	ID=comp111290_c0_seq1.mrna1;geneID=comp111290_c0_seq1.path1;Name=comp111290_c0_seq1;Dir=indeterminatecoverage=98.9;identity=100.0;matches=1042;mismatches=0;indels=0;unknowns=0;Target=comp111290_c0_seq1 1042 1 .;CDS_Target=comp111290_c0_seq1 187 2 .;locus=RLOC_00013890
Chr1	stalkie_big_nohaplotig	exon	174669041	174670082	100	+	.	Parent=comp111290_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	174669042	174669227	.	+	0	Parent=comp111290_c0_seq1.mrna1
Chr1	gffcl	locus	174715827	174716206	.	-	.	ID=RLOC_00013891;geneIDs=comp1141022_c0_seq1.path1;transcripts=comp1141022_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174715827	174716206	.	-	.	ID=comp1141022_c0_seq1.mrna1;geneID=comp1141022_c0_seq1.path1;Name=comp1141022_c0_seq1;Dir=indeterminatecoverage=94.3;identity=99.5;matches=378;mismatches=2;indels=0;unknowns=0;Target=comp1141022_c0_seq1 403 24 .;CDS_Target=comp1141022_c0_seq1 294 25 .;locus=RLOC_00013891
Chr1	stalkie_big_nohaplotig	exon	174715827	174716206	99	-	.	Parent=comp1141022_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	174715936	174716205	.	-	0	Parent=comp1141022_c0_seq1.mrna1
Chr1	gffcl	locus	174797834	174799871	.	-	.	ID=RLOC_00013892;geneIDs=ORF496.path1;transcripts=ORF496.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174797834	174799871	.	-	.	ID=ORF496.mrna1;geneID=ORF496.path1;Name=ORF496;Dir=sensecoverage=100.0;identity=99.0;matches=1710;mismatches=18;indels=0;unknowns=0;locus=RLOC_00013892
Chr1	stalkie_big_nohaplotig	exon	174797834	174797902	100	-	.	Parent=ORF496.mrna1;Target=ORF496 1660 1728 +
Chr1	stalkie_big_nohaplotig	exon	174797978	174798297	98	-	.	Parent=ORF496.mrna1;Target=ORF496 1340 1659 +
Chr1	stalkie_big_nohaplotig	exon	174798399	174799179	99	-	.	Parent=ORF496.mrna1;Target=ORF496 559 1339 +
Chr1	stalkie_big_nohaplotig	exon	174799238	174799680	98	-	.	Parent=ORF496.mrna1;Target=ORF496 116 558 +
Chr1	stalkie_big_nohaplotig	exon	174799757	174799871	98	-	.	Parent=ORF496.mrna1;Target=ORF496 1 115 +
Chr1	stalkie_big_nohaplotig	CDS	174797834	174797902	.	-	0	Parent=ORF496.mrna1;Target=ORF496 1660 1728 +
Chr1	stalkie_big_nohaplotig	CDS	174797978	174798297	.	-	2	Parent=ORF496.mrna1;Target=ORF496 1340 1659 +
Chr1	stalkie_big_nohaplotig	CDS	174798399	174799179	.	-	0	Parent=ORF496.mrna1;Target=ORF496 559 1339 +
Chr1	stalkie_big_nohaplotig	CDS	174799238	174799680	.	-	2	Parent=ORF496.mrna1;Target=ORF496 116 558 +
Chr1	stalkie_big_nohaplotig	CDS	174799757	174799871	.	-	0	Parent=ORF496.mrna1;Target=ORF496 1 115 +
Chr1	gffcl	locus	174814172	174817170	.	+	.	ID=RLOC_00013893;geneIDs=ORF108.path1;transcripts=ORF108.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174814172	174817170	.	+	.	ID=ORF108.mrna1;geneID=ORF108.path1;Name=ORF108;Dir=indeterminatecoverage=99.3;identity=99.9;matches=2996;mismatches=3;indels=0;unknowns=0;Target=ORF108 2999 1 .;CDS_Target=ORF108 2997 1 .;locus=RLOC_00013893
Chr1	stalkie_big_nohaplotig	exon	174814172	174817170	99	+	.	Parent=ORF108.mrna1
Chr1	stalkie_big_nohaplotig	CDS	174814172	174817168	.	+	0	Parent=ORF108.mrna1
Chr1	gffcl	locus	174827819	174837536	.	-	.	ID=RLOC_00013894;geneIDs=FBgn0052296.1.path1,comp161465_c1_seq1.path1;transcripts=FBgn0052296.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174827819	174837536	.	-	.	ID=FBgn0052296.1.mrna1;geneID=FBgn0052296.1.path1;Name=FBgn0052296.1;Dir=sensecoverage=92.0;identity=99.8;matches=4125;mismatches=8;indels=0;unknowns=0;locus=RLOC_00013894
Chr1	stalkie_big_nohaplotig	exon	174827819	174831885	99	-	.	Parent=FBgn0052296.1.mrna1;Target=FBgn0052296.1 428 4494 +
Chr1	stalkie_big_nohaplotig	exon	174837471	174837536	100	-	.	Parent=FBgn0052296.1.mrna1;Target=FBgn0052296.1 362 427 +
Chr1	stalkie_big_nohaplotig	CDS	174827819	174831885	.	-	2	Parent=FBgn0052296.1.mrna1;Target=FBgn0052296.1 428 4494 +
Chr1	stalkie_big_nohaplotig	CDS	174837471	174837534	.	-	0	Parent=FBgn0052296.1.mrna1;Target=FBgn0052296.1 364 427 +
Chr1	gffcl	locus	174840831	174841523	.	-	.	ID=RLOC_00013895;geneIDs=comp117604_c0_seq1.path1;transcripts=comp117604_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174840831	174841523	.	-	.	ID=comp117604_c0_seq1.mrna1;geneID=comp117604_c0_seq1.path1;Name=comp117604_c0_seq1;Dir=indeterminatecoverage=98.7;identity=99.0;matches=690;mismatches=3;indels=4;unknowns=0;Target=comp117604_c0_seq1 706 10 .;CDS_Target=comp117604_c0_seq1 316 80 .;locus=RLOC_00013895
Chr1	stalkie_big_nohaplotig	exon	174840831	174841523	98	-	.	Parent=comp117604_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	174841217	174841453	.	-	0	Parent=comp117604_c0_seq1.mrna1
Chr1	gffcl	locus	174842131	174842644	.	+	.	ID=RLOC_00013896;geneIDs=comp105670_c0_seq1.path1;transcripts=comp105670_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174842131	174842644	.	+	.	ID=comp105670_c0_seq1.mrna1;geneID=comp105670_c0_seq1.path1;Name=comp105670_c0_seq1;Dir=indeterminatecoverage=95.5;identity=99.8;matches=513;mismatches=1;indels=0;unknowns=0;Target=comp105670_c0_seq1 537 24 .;CDS_Target=comp105670_c0_seq1 221 69 .;locus=RLOC_00013896
Chr1	stalkie_big_nohaplotig	exon	174842131	174842644	99	+	.	Parent=comp105670_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	174842176	174842328	.	+	0	Parent=comp105670_c0_seq1.mrna1
Chr1	gffcl	locus	174844295	174844913	.	+	.	ID=RLOC_00013897;geneIDs=comp130567_c0_seq1.path1;transcripts=comp130567_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174844295	174844913	.	+	.	ID=comp130567_c0_seq1.mrna1;geneID=comp130567_c0_seq1.path1;Name=comp130567_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.8;matches=618;mismatches=1;indels=0;unknowns=0;Target=comp130567_c0_seq1 622 4 .;CDS_Target=comp130567_c0_seq1 248 6 .;locus=RLOC_00013897
Chr1	stalkie_big_nohaplotig	exon	174844295	174844913	99	+	.	Parent=comp130567_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	174844297	174844539	.	+	0	Parent=comp130567_c0_seq1.mrna1
Chr1	gffcl	locus	174853994	174855685	.	-	.	ID=RLOC_00013898;geneIDs=comp161212_c12_seq1.path1;transcripts=comp161212_c12_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174853994	174855685	.	-	.	ID=comp161212_c12_seq1.mrna1;geneID=comp161212_c12_seq1.path1;Name=comp161212_c12_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1685;mismatches=7;indels=13;unknowns=0;Target=comp161212_c12_seq1 1705 1 .;CDS_Target=comp161212_c12_seq1 1126 1073 .;locus=RLOC_00013898
Chr1	stalkie_big_nohaplotig	exon	174853994	174855685	98	-	.	Parent=comp161212_c12_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	174854567	174854613	.	-	0	Parent=comp161212_c12_seq1.mrna1
Chr1	gffcl	locus	174909213	174910123	.	-	.	ID=RLOC_00013899;geneIDs=comp144951_c0_seq1.path1;transcripts=comp144951_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174909213	174910123	.	-	.	ID=comp144951_c0_seq1.mrna1;geneID=comp144951_c0_seq1.path1;Name=comp144951_c0_seq1;Dir=indeterminatecoverage=79.1;identity=93.4;matches=453;mismatches=29;indels=3;unknowns=0;Target=comp144951_c0_seq1 161 129 .;locus=RLOC_00013899
Chr1	stalkie_big_nohaplotig	exon	174909213	174909241	96	-	.	Parent=comp144951_c0_seq1.mrna1;Target=comp144951_c0_seq1 613 585 .
Chr1	stalkie_big_nohaplotig	exon	174909608	174909911	93	-	.	Parent=comp144951_c0_seq1.mrna1;Target=comp144951_c0_seq1 584 278 .
Chr1	stalkie_big_nohaplotig	exon	174909975	174910123	92	-	.	Parent=comp144951_c0_seq1.mrna1;Target=comp144951_c0_seq1 277 129 .
Chr1	stalkie_big_nohaplotig	CDS	174910091	174910123	.	-	0	Parent=comp144951_c0_seq1.mrna1
Chr1	gffcl	locus	174952858	174959564	.	+	.	ID=RLOC_00013900;geneIDs=comp157671_c1_seq1.path2;transcripts=comp157671_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	174952858	174959564	.	+	.	ID=comp157671_c1_seq1.mrna2;geneID=comp157671_c1_seq1.path2;Name=comp157671_c1_seq1;Dir=indeterminatecoverage=96.9;identity=97.7;matches=1508;mismatches=24;indels=12;unknowns=0;locus=RLOC_00013900
Chr1	stalkie_big_nohaplotig	exon	174952858	174954182	98	+	.	Parent=comp157671_c1_seq1.mrna2;Target=comp157671_c1_seq1 1313 1 .
Chr1	stalkie_big_nohaplotig	exon	174959346	174959564	95	+	.	Parent=comp157671_c1_seq1.mrna2;Target=comp157671_c1_seq1 1532 1314 .
Chr1	stalkie_big_nohaplotig	CDS	174953537	174954182	.	+	0	Parent=comp157671_c1_seq1.mrna2;Target=comp157671_c1_seq1 1313 677 .
Chr1	stalkie_big_nohaplotig	CDS	174959346	174959488	.	+	2	Parent=comp157671_c1_seq1.mrna2;Target=comp157671_c1_seq1 1456 1314 .
Chr1	gffcl	locus	174978143	174978363	.	+	.	ID=RLOC_00013901;geneIDs=AGAP002778.path1;transcripts=AGAP002778.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	174978143	174978363	.	+	.	ID=AGAP002778.mrna1;geneID=AGAP002778.path1;Name=AGAP002778;Dir=indeterminatecoverage=90.5;identity=95.6;matches=218;mismatches=3;indels=7;unknowns=0;Target=AGAP002778 228 1 .;locus=RLOC_00013901
Chr1	stalkie_big_nohaplotig	exon	174978143	174978363	95	+	.	Parent=AGAP002778.mrna1
Chr1	stalkie_big_nohaplotig	CDS	174978143	174978363	.	+	0	Parent=AGAP002778.mrna1
Chr1	gffcl	locus	174982762	174982998	.	+	.	ID=RLOC_00013902;geneIDs=comp123581_c0_seq1.path5;transcripts=comp123581_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	174982762	174982998	.	+	.	ID=comp123581_c0_seq1.mrna5;geneID=comp123581_c0_seq1.path5;Name=comp123581_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.4;matches=219;mismatches=18;indels=0;unknowns=0;Target=comp123581_c0_seq1 237 1 .;CDS_Target=comp123581_c0_seq1 142 59 .;locus=RLOC_00013902
Chr1	stalkie_big_nohaplotig	exon	174982762	174982998	92	+	.	Parent=comp123581_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	174982820	174982903	.	+	0	Parent=comp123581_c0_seq1.mrna5
Chr1	gffcl	locus	175155971	175159379	.	-	.	ID=RLOC_00013904;geneIDs=comp148961_c0_seq1.path2;transcripts=comp148961_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	175155971	175159379	.	-	.	ID=comp148961_c0_seq1.mrna2;geneID=comp148961_c0_seq1.path2;Name=comp148961_c0_seq1;Dir=indeterminatecoverage=100.0;identity=80.1;matches=262;mismatches=29;indels=36;unknowns=0;locus=RLOC_00013904
Chr1	stalkie_big_nohaplotig	exon	175155971	175156019	89	-	.	Parent=comp148961_c0_seq1.mrna2;Target=comp148961_c0_seq1 323 275 .
Chr1	stalkie_big_nohaplotig	exon	175156101	175156108	100	-	.	Parent=comp148961_c0_seq1.mrna2;Target=comp148961_c0_seq1 274 267 .
Chr1	stalkie_big_nohaplotig	exon	175156316	175156357	53	-	.	Parent=comp148961_c0_seq1.mrna2;Target=comp148961_c0_seq1 266 198 .
Chr1	stalkie_big_nohaplotig	exon	175156763	175156789	92	-	.	Parent=comp148961_c0_seq1.mrna2;Target=comp148961_c0_seq1 197 171 .
Chr1	stalkie_big_nohaplotig	exon	175157440	175157488	75	-	.	Parent=comp148961_c0_seq1.mrna2;Target=comp148961_c0_seq1 165 126 .
Chr1	stalkie_big_nohaplotig	exon	175158506	175158521	93	-	.	Parent=comp148961_c0_seq1.mrna2;Target=comp148961_c0_seq1 125 110 .
Chr1	stalkie_big_nohaplotig	exon	175158690	175158770	85	-	.	Parent=comp148961_c0_seq1.mrna2;Target=comp148961_c0_seq1 109 29 .
Chr1	stalkie_big_nohaplotig	exon	175159352	175159379	96	-	.	Parent=comp148961_c0_seq1.mrna2;Target=comp148961_c0_seq1 28 1 .
Chr1	stalkie_big_nohaplotig	CDS	175155973	175156019	.	-	1	Parent=comp148961_c0_seq1.mrna2;Target=comp148961_c0_seq1 321 275 .
Chr1	stalkie_big_nohaplotig	CDS	175156101	175156108	.	-	0	Parent=comp148961_c0_seq1.mrna2;Target=comp148961_c0_seq1 274 267 .
Chr1	stalkie_big_nohaplotig	CDS	175156316	175156357	.	-	0	Parent=comp148961_c0_seq1.mrna2;Target=comp148961_c0_seq1 266 198 .
Chr1	stalkie_big_nohaplotig	CDS	175156763	175156789	.	-	0	Parent=comp148961_c0_seq1.mrna2;Target=comp148961_c0_seq1 197 171 .
Chr1	stalkie_big_nohaplotig	CDS	175157440	175157488	.	-	1	Parent=comp148961_c0_seq1.mrna2;Target=comp148961_c0_seq1 165 126 .
Chr1	stalkie_big_nohaplotig	CDS	175158506	175158521	.	-	2	Parent=comp148961_c0_seq1.mrna2;Target=comp148961_c0_seq1 125 110 .
Chr1	stalkie_big_nohaplotig	CDS	175158690	175158770	.	-	2	Parent=comp148961_c0_seq1.mrna2;Target=comp148961_c0_seq1 109 29 .
Chr1	stalkie_big_nohaplotig	CDS	175159352	175159379	.	-	0	Parent=comp148961_c0_seq1.mrna2;Target=comp148961_c0_seq1 28 1 .
Chr1	gffcl	locus	175186073	175186737	.	+	.	ID=RLOC_00013906;geneIDs=comp117462_c0_seq1.path1;transcripts=comp117462_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	175186073	175186737	.	+	.	ID=comp117462_c0_seq1.mrna1;geneID=comp117462_c0_seq1.path1;Name=comp117462_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=664;mismatches=1;indels=0;unknowns=0;Target=comp117462_c0_seq1 665 1 .;CDS_Target=comp117462_c0_seq1 281 117 .;locus=RLOC_00013906
Chr1	stalkie_big_nohaplotig	exon	175186073	175186737	99	+	.	Parent=comp117462_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	175186189	175186353	.	+	0	Parent=comp117462_c0_seq1.mrna1
Chr1	gffcl	locus	175188807	175189830	.	+	.	ID=RLOC_00013907;geneIDs=comp155776_c1_seq1.path2;transcripts=comp155776_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	175188807	175189830	.	+	.	ID=comp155776_c1_seq1.mrna2;geneID=comp155776_c1_seq1.path2;Name=comp155776_c1_seq1;Dir=indeterminatecoverage=95.4;identity=99.9;matches=1023;mismatches=1;indels=0;unknowns=0;Target=comp155776_c1_seq1 1073 50 .;CDS_Target=comp155776_c1_seq1 1039 752 .;locus=RLOC_00013907
Chr1	stalkie_big_nohaplotig	exon	175188807	175189830	99	+	.	Parent=comp155776_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	175189509	175189796	.	+	0	Parent=comp155776_c1_seq1.mrna2
Chr1	gffcl	locus	175249823	175250483	.	+	.	ID=RLOC_00013908;geneIDs=comp63271_c0_seq1.path2;transcripts=comp63271_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	175249823	175250483	.	+	.	ID=comp63271_c0_seq1.mrna2;geneID=comp63271_c0_seq1.path2;Name=comp63271_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.5;matches=658;mismatches=2;indels=1;unknowns=0;Target=comp63271_c0_seq1 670 11 .;CDS_Target=comp63271_c0_seq1 104 42 .;locus=RLOC_00013908
Chr1	stalkie_big_nohaplotig	exon	175249823	175250483	99	+	.	Parent=comp63271_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	175249854	175249916	.	+	0	Parent=comp63271_c0_seq1.mrna2
Chr1	gffcl	locus	175357964	175358638	.	+	.	ID=RLOC_00013912;geneIDs=comp134674_c0_seq1.path1;transcripts=comp134674_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	175357964	175358638	.	+	.	ID=comp134674_c0_seq1.mrna1;geneID=comp134674_c0_seq1.path1;Name=comp134674_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=675;mismatches=0;indels=0;unknowns=0;Target=comp134674_c0_seq1 675 1 .;CDS_Target=comp134674_c0_seq1 450 313 .;locus=RLOC_00013912
Chr1	stalkie_big_nohaplotig	exon	175357964	175358638	100	+	.	Parent=comp134674_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	175358276	175358413	.	+	0	Parent=comp134674_c0_seq1.mrna1
Chr1	gffcl	locus	175369455	175369704	.	+	.	ID=RLOC_00013914;geneIDs=comp140565_c0_seq1.path6;transcripts=comp140565_c0_seq1.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	175369455	175369704	.	+	.	ID=comp140565_c0_seq1.mrna6;geneID=comp140565_c0_seq1.path6;Name=comp140565_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=246;mismatches=4;indels=0;unknowns=0;Target=comp140565_c0_seq1 250 1 .;CDS_Target=comp140565_c0_seq1 249 1 .;locus=RLOC_00013914
Chr1	stalkie_big_nohaplotig	exon	175369455	175369704	98	+	.	Parent=comp140565_c0_seq1.mrna6
Chr1	stalkie_big_nohaplotig	CDS	175369455	175369703	.	+	0	Parent=comp140565_c0_seq1.mrna6
Chr1	gffcl	locus	175387551	175387936	.	-	.	ID=RLOC_00013915;geneIDs=FBgn0053870.2.path2;transcripts=FBgn0053870.2.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	175387551	175387936	.	-	.	ID=FBgn0053870.2.mrna2;geneID=FBgn0053870.2.path2;Name=FBgn0053870.2;Dir=indeterminatecoverage=99.7;identity=100.0;matches=386;mismatches=0;indels=0;unknowns=0;Target=FBgn0053870.2 387 2 .;CDS_Target=FBgn0053870.2 387 4 .;locus=RLOC_00013915
Chr1	stalkie_big_nohaplotig	exon	175387551	175387936	100	-	.	Parent=FBgn0053870.2.mrna2
Chr1	stalkie_big_nohaplotig	CDS	175387551	175387934	.	-	0	Parent=FBgn0053870.2.mrna2
Chr1	gffcl	locus	175393496	175393882	.	+	.	ID=RLOC_00013916;geneIDs=FBgn0053817.2.path2;transcripts=FBgn0053817.2.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	175393496	175393882	.	+	.	ID=FBgn0053817.2.mrna2;geneID=FBgn0053817.2.path2;Name=FBgn0053817.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=387;mismatches=0;indels=0;unknowns=0;Target=FBgn0053817.2 387 1 .;locus=RLOC_00013916
Chr1	stalkie_big_nohaplotig	exon	175393496	175393882	100	+	.	Parent=FBgn0053817.2.mrna2
Chr1	stalkie_big_nohaplotig	CDS	175393496	175393882	.	+	0	Parent=FBgn0053817.2.mrna2
Chr1	gffcl	locus	175445573	175446122	.	+	.	ID=RLOC_00013918;geneIDs=comp154952_c0_seq1.path3;transcripts=comp154952_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	175445573	175446122	.	+	.	ID=comp154952_c0_seq1.mrna3;geneID=comp154952_c0_seq1.path3;Name=comp154952_c0_seq1;Dir=indeterminatecoverage=92.9;identity=99.3;matches=546;mismatches=4;indels=0;unknowns=0;Target=comp154952_c0_seq1 568 19 .;CDS_Target=comp154952_c0_seq1 497 390 .;locus=RLOC_00013918
Chr1	stalkie_big_nohaplotig	exon	175445573	175446122	99	+	.	Parent=comp154952_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	175445944	175446051	.	+	0	Parent=comp154952_c0_seq1.mrna3
Chr1	gffcl	locus	175453057	175453651	.	-	.	ID=RLOC_00013919;geneIDs=comp133913_c1_seq1.path2;transcripts=comp133913_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	175453057	175453651	.	-	.	ID=comp133913_c1_seq1.mrna2;geneID=comp133913_c1_seq1.path2;Name=comp133913_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=594;mismatches=1;indels=0;unknowns=0;Target=comp133913_c1_seq1 595 1 .;CDS_Target=comp133913_c1_seq1 126 1 .;locus=RLOC_00013919
Chr1	stalkie_big_nohaplotig	exon	175453057	175453651	99	-	.	Parent=comp133913_c1_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	175453526	175453651	.	-	0	Parent=comp133913_c1_seq1.mrna2
Chr1	gffcl	locus	175453691	175454102	.	+	.	ID=RLOC_00013920;geneIDs=comp137806_c0_seq1.path1;transcripts=comp137806_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	175453691	175454102	.	+	.	ID=comp137806_c0_seq1.mrna1;geneID=comp137806_c0_seq1.path1;Name=comp137806_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=412;mismatches=0;indels=0;unknowns=0;Target=comp137806_c0_seq1 412 1 .;CDS_Target=comp137806_c0_seq1 117 1 .;locus=RLOC_00013920
Chr1	stalkie_big_nohaplotig	exon	175453691	175454102	100	+	.	Parent=comp137806_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	175453691	175453807	.	+	0	Parent=comp137806_c0_seq1.mrna1
Chr1	gffcl	locus	175454245	175454558	.	-	.	ID=RLOC_00013921;geneIDs=comp87840_c0_seq1.path1;transcripts=comp87840_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	175454245	175454558	.	-	.	ID=comp87840_c0_seq1.mrna1;geneID=comp87840_c0_seq1.path1;Name=comp87840_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=314;mismatches=0;indels=0;unknowns=0;Target=comp87840_c0_seq1 314 1 .;CDS_Target=comp87840_c0_seq1 36 1 .;locus=RLOC_00013921
Chr1	stalkie_big_nohaplotig	exon	175454245	175454558	100	-	.	Parent=comp87840_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	175454523	175454558	.	-	0	Parent=comp87840_c0_seq1.mrna1
Chr1	gffcl	locus	175578245	175578906	.	-	.	ID=RLOC_00013924;geneIDs=comp117462_c0_seq1.path3;transcripts=comp117462_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	175578245	175578906	.	-	.	ID=comp117462_c0_seq1.mrna3;geneID=comp117462_c0_seq1.path3;Name=comp117462_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=661;mismatches=1;indels=3;unknowns=0;Target=comp117462_c0_seq1 665 1 .;CDS_Target=comp117462_c0_seq1 281 117 .;locus=RLOC_00013924
Chr1	stalkie_big_nohaplotig	exon	175578245	175578906	99	-	.	Parent=comp117462_c0_seq1.mrna3
Chr1	stalkie_big_nohaplotig	CDS	175578626	175578790	.	-	0	Parent=comp117462_c0_seq1.mrna3
Chr1	gffcl	locus	175578986	175581655	.	-	.	ID=RLOC_00013925;geneIDs=comp158593_c2_seq1.path1;transcripts=comp158593_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	175578986	175581655	.	-	.	ID=comp158593_c2_seq1.mrna1;geneID=comp158593_c2_seq1.path1;Name=comp158593_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2668;mismatches=2;indels=0;unknowns=0;Target=comp158593_c2_seq1 2670 1 .;CDS_Target=comp158593_c2_seq1 1945 1616 .;locus=RLOC_00013925
Chr1	stalkie_big_nohaplotig	exon	175578986	175581655	99	-	.	Parent=comp158593_c2_seq1.mrna1
Chr1	stalkie_big_nohaplotig	CDS	175579711	175580040	.	-	0	Parent=comp158593_c2_seq1.mrna1
Chr1	gffcl	locus	175600021	175600407	.	-	.	ID=RLOC_00013926;geneIDs=FBgn0053817.2.path3;transcripts=FBgn0053817.2.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	175600021	175600407	.	-	.	ID=FBgn0053817.2.mrna3;geneID=FBgn0053817.2.path3;Name=FBgn0053817.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=387;mismatches=0;indels=0;unknowns=0;Target=FBgn0053817.2 387 1 .;locus=RLOC_00013926
Chr1	stalkie_big_nohaplotig	exon	175600021	175600407	100	-	.	Parent=FBgn0053817.2.mrna3
Chr1	stalkie_big_nohaplotig	CDS	175600021	175600407	.	-	0	Parent=FBgn0053817.2.mrna3
Chr1	gffcl	locus	175602046	175602431	.	+	.	ID=RLOC_00013927;geneIDs=FBgn0053870.2.path3;transcripts=FBgn0053870.2.mrna3
Chr1	stalkie_big_nohaplotig	mRNA	175602046	175602431	.	+	.	ID=FBgn0053870.2.mrna3;geneID=FBgn0053870.2.path3;Name=FBgn0053870.2;Dir=indeterminatecoverage=99.7;identity=100.0;matches=386;mismatches=0;indels=0;unknowns=0;Target=FBgn0053870.2 387 2 .;CDS_Target=FBgn0053870.2 387 4 .;locus=RLOC_00013927
Chr1	stalkie_big_nohaplotig	exon	175602046	175602431	100	+	.	Parent=FBgn0053870.2.mrna3
Chr1	stalkie_big_nohaplotig	CDS	175602048	175602431	.	+	0	Parent=FBgn0053870.2.mrna3
Chr1	gffcl	locus	175652371	175653922	.	-	.	ID=RLOC_00013928;geneIDs=ORF659.path6;transcripts=ORF659.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	175652371	175653922	.	-	.	ID=ORF659.mrna6;geneID=ORF659.path6;Name=ORF659;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1551;mismatches=1;indels=2;unknowns=0;Target=ORF659 1554 1 .;CDS_Target=ORF659 107 3 .;locus=RLOC_00013928
Chr1	stalkie_big_nohaplotig	exon	175652371	175653922	99	-	.	Parent=ORF659.mrna6
Chr1	stalkie_big_nohaplotig	CDS	175653817	175653920	.	-	0	Parent=ORF659.mrna6
Chr1	gffcl	locus	175655262	175656228	.	+	.	ID=RLOC_00013929;geneIDs=comp162746_c0_seq1.path6;transcripts=comp162746_c0_seq1.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	175655262	175656228	.	+	.	ID=comp162746_c0_seq1.mrna6;geneID=comp162746_c0_seq1.path6;Name=comp162746_c0_seq1;Dir=indeterminatecoverage=89.0;identity=99.5;matches=962;mismatches=5;indels=0;unknowns=0;Target=comp162746_c0_seq1 1066 100 .;CDS_Target=comp162746_c0_seq1 961 521 .;locus=RLOC_00013929
Chr1	stalkie_big_nohaplotig	exon	175655262	175656228	99	+	.	Parent=comp162746_c0_seq1.mrna6
Chr1	stalkie_big_nohaplotig	CDS	175655683	175656123	.	+	0	Parent=comp162746_c0_seq1.mrna6
Chr1	gffcl	locus	175724828	175736628	.	+	.	ID=RLOC_00013930;geneIDs=comp160425_c6_seq1.path1;transcripts=comp160425_c6_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	175724828	175736628	.	+	.	ID=comp160425_c6_seq1.mrna1;geneID=comp160425_c6_seq1.path1;Name=comp160425_c6_seq1;Dir=antisensecoverage=81.1;identity=94.5;matches=2020;mismatches=69;indels=48;unknowns=0;locus=RLOC_00013930
Chr1	stalkie_big_nohaplotig	exon	175724828	175726387	96	+	.	Parent=comp160425_c6_seq1.mrna1;Target=comp160425_c6_seq1 613 2149 -
Chr1	stalkie_big_nohaplotig	exon	175736052	175736628	89	+	.	Parent=comp160425_c6_seq1.mrna1;Target=comp160425_c6_seq1 61 612 -
Chr1	gffcl	locus	175753340	175754191	.	+	.	ID=RLOC_00013931;geneIDs=comp151661_c0_seq1.path1;transcripts=comp151661_c0_seq1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	175753340	175754191	.	+	.	ID=comp151661_c0_seq1.mrna1;geneID=comp151661_c0_seq1.path1;Name=comp151661_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=733;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013931
Chr1	stalkie_big_nohaplotig	exon	175753340	175753385	100	+	.	Parent=comp151661_c0_seq1.mrna1;Target=comp151661_c0_seq1 690 735 -
Chr1	stalkie_big_nohaplotig	exon	175753448	175753501	100	+	.	Parent=comp151661_c0_seq1.mrna1;Target=comp151661_c0_seq1 636 689 -
Chr1	stalkie_big_nohaplotig	exon	175753557	175754191	99	+	.	Parent=comp151661_c0_seq1.mrna1;Target=comp151661_c0_seq1 1 635 -
Chr1	stalkie_big_nohaplotig	CDS	175753492	175753501	.	+	0	Parent=comp151661_c0_seq1.mrna1;Target=comp151661_c0_seq1 636 645 .
Chr1	stalkie_big_nohaplotig	CDS	175753557	175753633	.	+	2	Parent=comp151661_c0_seq1.mrna1;Target=comp151661_c0_seq1 559 635 .
Chr1	gffcl	locus	175778427	175779081	.	+	.	ID=RLOC_00013932;geneIDs=comp63271_c0_seq1.path5;transcripts=comp63271_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	mRNA	175778427	175779081	.	+	.	ID=comp63271_c0_seq1.mrna5;geneID=comp63271_c0_seq1.path5;Name=comp63271_c0_seq1;Dir=indeterminatecoverage=98.4;identity=94.5;matches=624;mismatches=31;indels=5;unknowns=0;Target=comp63271_c0_seq1 670 11 .;CDS_Target=comp63271_c0_seq1 104 42 .;locus=RLOC_00013932
Chr1	stalkie_big_nohaplotig	exon	175778427	175779081	94	+	.	Parent=comp63271_c0_seq1.mrna5
Chr1	stalkie_big_nohaplotig	CDS	175778458	175778520	.	+	0	Parent=comp63271_c0_seq1.mrna5
Chr1	gffcl	locus	175780952	175783884	.	-	.	ID=RLOC_00013933;geneIDs=comp63271_c0_seq1.path4;transcripts=comp63271_c0_seq1.mrna4
Chr1	stalkie_big_nohaplotig	mRNA	175780952	175783884	.	-	.	ID=comp63271_c0_seq1.mrna4;geneID=comp63271_c0_seq1.path4;Name=comp63271_c0_seq1;Dir=antisensecoverage=98.4;identity=98.6;matches=657;mismatches=3;indels=6;unknowns=0;Target=comp63271_c0_seq1 324 419 .;locus=RLOC_00013933
Chr1	stalkie_big_nohaplotig	exon	175780952	175781501	98	-	.	Parent=comp63271_c0_seq1.mrna4;Target=comp63271_c0_seq1 11 554 -
Chr1	stalkie_big_nohaplotig	exon	175783769	175783884	100	-	.	Parent=comp63271_c0_seq1.mrna4;Target=comp63271_c0_seq1 555 670 -
Chr1	stalkie_big_nohaplotig	CDS	175781271	175781366	.	-	0	Parent=comp63271_c0_seq1.mrna4
Chr1	gffcl	locus	175799181	175799391	.	+	.	ID=RLOC_00013934;geneIDs=comp150287_c0_seq1.path10;transcripts=comp150287_c0_seq1.mrna10
Chr1	stalkie_big_nohaplotig	mRNA	175799181	175799391	.	+	.	ID=comp150287_c0_seq1.mrna10;geneID=comp150287_c0_seq1.path10;Name=comp150287_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=204;mismatches=7;indels=0;unknowns=0;Target=comp150287_c0_seq1 211 1 .;CDS_Target=comp150287_c0_seq1 211 2 .;locus=RLOC_00013934
Chr1	stalkie_big_nohaplotig	exon	175799181	175799391	96	+	.	Parent=comp150287_c0_seq1.mrna10
Chr1	stalkie_big_nohaplotig	CDS	175799182	175799391	.	+	0	Parent=comp150287_c0_seq1.mrna10
Chr1	gffcl	locus	175824229	175825029	.	+	.	ID=RLOC_00013935;geneIDs=FBgn0261394.3.path1;transcripts=FBgn0261394.3.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	175824229	175825029	.	+	.	ID=FBgn0261394.3.mrna1;geneID=FBgn0261394.3.path1;Name=FBgn0261394.3;Dir=sensecoverage=99.9;identity=98.4;matches=734;mismatches=11;indels=1;unknowns=0;Target=FBgn0261394.3 3 59 +;locus=RLOC_00013935
Chr1	stalkie_big_nohaplotig	exon	175824229	175824432	97	+	.	Parent=FBgn0261394.3.mrna1;Target=FBgn0261394.3 2 206 +
Chr1	stalkie_big_nohaplotig	exon	175824489	175825029	98	+	.	Parent=FBgn0261394.3.mrna1;Target=FBgn0261394.3 207 747 +
Chr1	stalkie_big_nohaplotig	CDS	175824230	175824285	.	+	0	Parent=FBgn0261394.3.mrna1
Chr1	gffcl	locus	175868802	175870718	.	-	.	ID=RLOC_00013936;geneIDs=FBgn0025628.1.path2;transcripts=FBgn0025628.1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	175868802	175870718	.	-	.	ID=FBgn0025628.1.mrna2;geneID=FBgn0025628.1.path2;Name=FBgn0025628.1;Dir=sensecoverage=86.7;identity=100.0;matches=1686;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013936
Chr1	stalkie_big_nohaplotig	exon	175868802	175869569	100	-	.	Parent=FBgn0025628.1.mrna2;Target=FBgn0025628.1 1177 1944 +
Chr1	stalkie_big_nohaplotig	exon	175869801	175870718	100	-	.	Parent=FBgn0025628.1.mrna2;Target=FBgn0025628.1 259 1176 +
Chr1	stalkie_big_nohaplotig	CDS	175868802	175869569	.	-	0	Parent=FBgn0025628.1.mrna2;Target=FBgn0025628.1 1177 1944 +
Chr1	stalkie_big_nohaplotig	CDS	175869801	175870718	.	-	0	Parent=FBgn0025628.1.mrna2;Target=FBgn0025628.1 259 1176 +
Chr1	gffcl	locus	175882205	175886532	.	-	.	ID=RLOC_00013937;geneIDs=FBgn0028429.1.path1;transcripts=FBgn0028429.1.mrna1
Chr1	stalkie_big_nohaplotig	mRNA	175882205	175886532	.	-	.	ID=FBgn0028429.1.mrna1;geneID=FBgn0028429.1.path1;Name=FBgn0028429.1;Dir=sensecoverage=100.0;identity=100.0;matches=669;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013937
Chr1	stalkie_big_nohaplotig	exon	175882205	175882521	100	-	.	Parent=FBgn0028429.1.mrna1;Target=FBgn0028429.1 353 669 +
Chr1	stalkie_big_nohaplotig	exon	175882582	175882670	100	-	.	Parent=FBgn0028429.1.mrna1;Target=FBgn0028429.1 264 352 +
Chr1	stalkie_big_nohaplotig	exon	175882739	175882906	100	-	.	Parent=FBgn0028429.1.mrna1;Target=FBgn0028429.1 96 263 +
Chr1	stalkie_big_nohaplotig	exon	175886438	175886532	100	-	.	Parent=FBgn0028429.1.mrna1;Target=FBgn0028429.1 1 95 +
Chr1	stalkie_big_nohaplotig	CDS	175882205	175882521	.	-	2	Parent=FBgn0028429.1.mrna1;Target=FBgn0028429.1 353 669 +
Chr1	stalkie_big_nohaplotig	CDS	175882582	175882670	.	-	1	Parent=FBgn0028429.1.mrna1;Target=FBgn0028429.1 264 352 +
Chr1	stalkie_big_nohaplotig	CDS	175882739	175882906	.	-	1	Parent=FBgn0028429.1.mrna1;Target=FBgn0028429.1 96 263 +
Chr1	stalkie_big_nohaplotig	CDS	175886438	175886532	.	-	0	Parent=FBgn0028429.1.mrna1;Target=FBgn0028429.1 1 95 +
Chr1	gffcl	locus	175887398	175887605	.	+	.	ID=RLOC_00013938;geneIDs=comp149345_c0_seq1.path2;transcripts=comp149345_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	mRNA	175887398	175887605	.	+	.	ID=comp149345_c0_seq1.mrna2;geneID=comp149345_c0_seq1.path2;Name=comp149345_c0_seq1;Dir=indeterminatecoverage=64.2;identity=82.2;matches=171;mismatches=10;indels=27;unknowns=0;Target=comp149345_c0_seq1 282 102 .;CDS_Target=comp149345_c0_seq1 198 172 .;locus=RLOC_00013938
Chr1	stalkie_big_nohaplotig	exon	175887398	175887605	82	+	.	Parent=comp149345_c0_seq1.mrna2
Chr1	stalkie_big_nohaplotig	CDS	175887468	175887494	.	+	0	Parent=comp149345_c0_seq1.mrna2
Chr1	gffcl	locus	175947615	175947862	.	-	.	ID=RLOC_00013940;geneIDs=comp140565_c0_seq1.path10;transcripts=comp140565_c0_seq1.mrna10
Chr1	stalkie_big_nohaplotig	mRNA	175947615	175947862	.	-	.	ID=comp140565_c0_seq1.mrna10;geneID=comp140565_c0_seq1.path10;Name=comp140565_c0_seq1;Dir=indeterminatecoverage=99.2;identity=97.6;matches=242;mismatches=6;indels=0;unknowns=0;Target=comp140565_c0_seq1 250 3 .;CDS_Target=comp140565_c0_seq1 249 4 .;locus=RLOC_00013940
Chr1	stalkie_big_nohaplotig	exon	175947615	175947862	97	-	.	Parent=comp140565_c0_seq1.mrna10
Chr1	stalkie_big_nohaplotig	CDS	175947616	175947861	.	-	0	Parent=comp140565_c0_seq1.mrna10
Chr1	gffcl	locus	176005696	176006142	.	+	.	ID=RLOC_00013942;geneIDs=Dp_FBgn0245412.2.path6;transcripts=Dp_FBgn0245412.2.mrna6
Chr1	stalkie_big_nohaplotig	mRNA	176005696	176006142	.	+	.	ID=Dp_FBgn0245412.2.mrna6;geneID=Dp_FBgn0245412.2.path6;Name=Dp_FBgn0245412.2;Dir=indeterminatecoverage=100.0;identity=98.7;matches=441;mismatches=6;indels=0;unknowns=0;Target=Dp_FBgn0245412.2 447 1 .;locus=RLOC_00013942
Chr1	stalkie_big_nohaplotig	exon	176005696	176006142	98	+	.	Parent=Dp_FBgn0245412.2.mrna6
Chr1	stalkie_big_nohaplotig	CDS	176005696	176006142	.	+	0	Parent=Dp_FBgn0245412.2.mrna6
Chr2	gffcl	locus	14215	16881	.	+	.	ID=RLOC_00013944;geneIDs=FBgn0050069.path1;transcripts=FBgn0050069.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14215	16881	.	+	.	ID=FBgn0050069.mrna1;geneID=FBgn0050069.path1;Name=FBgn0050069;Dir=indeterminatecoverage=100.0;identity=99.0;matches=2639;mismatches=28;indels=0;unknowns=0;Target=FBgn0050069 2667 1 .;locus=RLOC_00013944
Chr2	stalkie_big_nohaplotig	exon	14215	16881	98	+	.	Parent=FBgn0050069.mrna1
Chr2	stalkie_big_nohaplotig	CDS	14215	16881	.	+	0	Parent=FBgn0050069.mrna1
Chr2	gffcl	locus	34675	35397	.	-	.	ID=RLOC_00013945;geneIDs=FBgn0029853.1.path1;transcripts=FBgn0029853.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34675	35397	.	-	.	ID=FBgn0029853.1.mrna1;geneID=FBgn0029853.1.path1;Name=FBgn0029853.1;Dir=sensecoverage=100.0;identity=99.5;matches=579;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013945
Chr2	stalkie_big_nohaplotig	exon	34675	34978	99	-	.	Parent=FBgn0029853.1.mrna1;Target=FBgn0029853.1 279 582 +
Chr2	stalkie_big_nohaplotig	exon	35054	35225	100	-	.	Parent=FBgn0029853.1.mrna1;Target=FBgn0029853.1 107 278 +
Chr2	stalkie_big_nohaplotig	exon	35292	35397	100	-	.	Parent=FBgn0029853.1.mrna1;Target=FBgn0029853.1 1 106 +
Chr2	stalkie_big_nohaplotig	CDS	34675	34978	.	-	1	Parent=FBgn0029853.1.mrna1;Target=FBgn0029853.1 279 582 +
Chr2	stalkie_big_nohaplotig	CDS	35054	35225	.	-	2	Parent=FBgn0029853.1.mrna1;Target=FBgn0029853.1 107 278 +
Chr2	stalkie_big_nohaplotig	CDS	35292	35397	.	-	0	Parent=FBgn0029853.1.mrna1;Target=FBgn0029853.1 1 106 +
Chr2	gffcl	locus	35959	39393	.	+	.	ID=RLOC_00013946;geneIDs=FBgn0262116.1.path1;transcripts=FBgn0262116.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35959	39393	.	+	.	ID=FBgn0262116.1.mrna1;geneID=FBgn0262116.1.path1;Name=FBgn0262116.1;Dir=sensecoverage=100.0;identity=100.0;matches=297;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013946
Chr2	stalkie_big_nohaplotig	exon	35959	36039	100	+	.	Parent=FBgn0262116.1.mrna1;Target=FBgn0262116.1 1 81 +
Chr2	stalkie_big_nohaplotig	exon	36114	36233	100	+	.	Parent=FBgn0262116.1.mrna1;Target=FBgn0262116.1 82 201 +
Chr2	stalkie_big_nohaplotig	exon	39298	39393	100	+	.	Parent=FBgn0262116.1.mrna1;Target=FBgn0262116.1 202 297 +
Chr2	stalkie_big_nohaplotig	CDS	35959	36039	.	+	0	Parent=FBgn0262116.1.mrna1;Target=FBgn0262116.1 1 81 +
Chr2	stalkie_big_nohaplotig	CDS	36114	36233	.	+	0	Parent=FBgn0262116.1.mrna1;Target=FBgn0262116.1 82 201 +
Chr2	stalkie_big_nohaplotig	CDS	39298	39393	.	+	0	Parent=FBgn0262116.1.mrna1;Target=FBgn0262116.1 202 297 +
Chr2	gffcl	locus	40346	41024	.	+	.	ID=RLOC_00013947;geneIDs=comp149050_c0_seq1.path1;transcripts=comp149050_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40346	41024	.	+	.	ID=comp149050_c0_seq1.mrna1;geneID=comp149050_c0_seq1.path1;Name=comp149050_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.3;matches=648;mismatches=18;indels=14;unknowns=0;Target=comp149050_c0_seq1 667 1 .;CDS_Target=comp149050_c0_seq1 60 1 .;locus=RLOC_00013947
Chr2	stalkie_big_nohaplotig	exon	40346	41024	95	+	.	Parent=comp149050_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	40346	40405	.	+	0	Parent=comp149050_c0_seq1.mrna1
Chr2	gffcl	locus	52652	53039	.	+	.	ID=RLOC_00013948;geneIDs=comp157469_c0_seq1.path1;transcripts=comp157469_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52652	53039	.	+	.	ID=comp157469_c0_seq1.mrna1;geneID=comp157469_c0_seq1.path1;Name=comp157469_c0_seq1;Dir=indeterminatecoverage=99.7;identity=91.2;matches=354;mismatches=17;indels=17;unknowns=0;Target=comp157469_c0_seq1 371 1 .;CDS_Target=comp157469_c0_seq1 188 135 .;locus=RLOC_00013948
Chr2	stalkie_big_nohaplotig	exon	52652	53039	91	+	.	Parent=comp157469_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	52786	52840	.	+	0	Parent=comp157469_c0_seq1.mrna1
Chr2	gffcl	locus	58106	67982	.	-	.	ID=RLOC_00013949;geneIDs=FBgn0050440.path1;transcripts=FBgn0050440.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58106	67982	.	-	.	ID=FBgn0050440.mrna1;geneID=FBgn0050440.path1;Name=FBgn0050440;Dir=sensecoverage=76.3;identity=99.5;matches=1098;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013949
Chr2	stalkie_big_nohaplotig	exon	58106	58286	100	-	.	Parent=FBgn0050440.mrna1;Target=FBgn0050440 1264 1444 +
Chr2	stalkie_big_nohaplotig	exon	58848	59045	99	-	.	Parent=FBgn0050440.mrna1;Target=FBgn0050440 1066 1263 +
Chr2	stalkie_big_nohaplotig	exon	59124	59441	99	-	.	Parent=FBgn0050440.mrna1;Target=FBgn0050440 748 1065 +
Chr2	stalkie_big_nohaplotig	exon	59511	59696	98	-	.	Parent=FBgn0050440.mrna1;Target=FBgn0050440 562 747 +
Chr2	stalkie_big_nohaplotig	exon	64688	64783	98	-	.	Parent=FBgn0050440.mrna1;Target=FBgn0050440 466 561 +
Chr2	stalkie_big_nohaplotig	exon	67858	67982	100	-	.	Parent=FBgn0050440.mrna1;Target=FBgn0050440 341 465 +
Chr2	stalkie_big_nohaplotig	CDS	58107	58286	.	-	0	Parent=FBgn0050440.mrna1;Target=FBgn0050440 1264 1443 +
Chr2	stalkie_big_nohaplotig	CDS	58848	59045	.	-	0	Parent=FBgn0050440.mrna1;Target=FBgn0050440 1066 1263 +
Chr2	stalkie_big_nohaplotig	CDS	59124	59441	.	-	0	Parent=FBgn0050440.mrna1;Target=FBgn0050440 748 1065 +
Chr2	stalkie_big_nohaplotig	CDS	59511	59696	.	-	0	Parent=FBgn0050440.mrna1;Target=FBgn0050440 562 747 +
Chr2	stalkie_big_nohaplotig	CDS	64688	64783	.	-	0	Parent=FBgn0050440.mrna1;Target=FBgn0050440 466 561 +
Chr2	stalkie_big_nohaplotig	CDS	67858	67980	.	-	0	Parent=FBgn0050440.mrna1;Target=FBgn0050440 343 465 +
Chr2	gffcl	locus	78675	406444	.	.	.	ID=RLOC_00013950;geneIDs=comp134171_c2_seq1.path1,comp135214_c0_seq1.path1;transcripts=comp135214_c0_seq1.mrna1,comp134171_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78675	406444	.	+	.	ID=comp135214_c0_seq1.mrna1;geneID=comp135214_c0_seq1.path1;Name=comp135214_c0_seq1;Dir=indeterminatecoverage=86.8;identity=97.8;matches=591;mismatches=9;indels=4;unknowns=0;Target=comp135214_c0_seq1 554 438 .;locus=RLOC_00013950
Chr2	stalkie_big_nohaplotig	exon	78675	78685	90	+	.	Parent=comp135214_c0_seq1.mrna1;Target=comp135214_c0_seq1 102 92 .
Chr2	stalkie_big_nohaplotig	exon	83583	83587	100	+	.	Parent=comp135214_c0_seq1.mrna1;Target=comp135214_c0_seq1 107 103 .
Chr2	stalkie_big_nohaplotig	exon	88239	88240	100	+	.	Parent=comp135214_c0_seq1.mrna1;Target=comp135214_c0_seq1 109 108 .
Chr2	stalkie_big_nohaplotig	exon	92230	92236	100	+	.	Parent=comp135214_c0_seq1.mrna1;Target=comp135214_c0_seq1 116 110 .
Chr2	stalkie_big_nohaplotig	exon	99127	99128	100	+	.	Parent=comp135214_c0_seq1.mrna1;Target=comp135214_c0_seq1 118 117 .
Chr2	stalkie_big_nohaplotig	exon	105863	105868	100	+	.	Parent=comp135214_c0_seq1.mrna1;Target=comp135214_c0_seq1 124 119 .
Chr2	stalkie_big_nohaplotig	exon	138441	138445	100	+	.	Parent=comp135214_c0_seq1.mrna1;Target=comp135214_c0_seq1 129 125 .
Chr2	stalkie_big_nohaplotig	exon	142148	142156	100	+	.	Parent=comp135214_c0_seq1.mrna1;Target=comp135214_c0_seq1 138 130 .
Chr2	stalkie_big_nohaplotig	exon	149905	149909	100	+	.	Parent=comp135214_c0_seq1.mrna1;Target=comp135214_c0_seq1 143 139 .
Chr2	stalkie_big_nohaplotig	exon	154132	154138	100	+	.	Parent=comp135214_c0_seq1.mrna1;Target=comp135214_c0_seq1 150 144 .
Chr2	stalkie_big_nohaplotig	exon	160685	160686	100	+	.	Parent=comp135214_c0_seq1.mrna1;Target=comp135214_c0_seq1 152 151 .
Chr2	stalkie_big_nohaplotig	exon	168576	168588	100	+	.	Parent=comp135214_c0_seq1.mrna1;Target=comp135214_c0_seq1 165 153 .
Chr2	stalkie_big_nohaplotig	exon	180550	180572	56	+	.	Parent=comp135214_c0_seq1.mrna1;Target=comp135214_c0_seq1 184 166 .
Chr2	stalkie_big_nohaplotig	exon	186285	186295	100	+	.	Parent=comp135214_c0_seq1.mrna1;Target=comp135214_c0_seq1 195 185 .
Chr2	stalkie_big_nohaplotig	exon	188663	188665	100	+	.	Parent=comp135214_c0_seq1.mrna1;Target=comp135214_c0_seq1 198 196 .
Chr2	stalkie_big_nohaplotig	exon	192820	192821	100	+	.	Parent=comp135214_c0_seq1.mrna1;Target=comp135214_c0_seq1 200 199 .
Chr2	stalkie_big_nohaplotig	exon	199794	199795	100	+	.	Parent=comp135214_c0_seq1.mrna1;Target=comp135214_c0_seq1 202 201 .
Chr2	stalkie_big_nohaplotig	exon	202812	202813	100	+	.	Parent=comp135214_c0_seq1.mrna1;Target=comp135214_c0_seq1 204 203 .
Chr2	stalkie_big_nohaplotig	exon	204252	204253	100	+	.	Parent=comp135214_c0_seq1.mrna1;Target=comp135214_c0_seq1 206 205 .
Chr2	stalkie_big_nohaplotig	exon	405960	406444	99	+	.	Parent=comp135214_c0_seq1.mrna1;Target=comp135214_c0_seq1 691 207 .
Chr2	stalkie_big_nohaplotig	CDS	406191	406307	.	+	0	Parent=comp135214_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	197760	200385	.	-	.	ID=comp134171_c2_seq1.mrna1;geneID=comp134171_c2_seq1.path1;Name=comp134171_c2_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2626;mismatches=0;indels=0;unknowns=0;Target=comp134171_c2_seq1 2626 1 .;CDS_Target=comp134171_c2_seq1 399 34 .;locus=RLOC_00013950
Chr2	stalkie_big_nohaplotig	exon	197760	200385	100	-	.	Parent=comp134171_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	199987	200352	.	-	0	Parent=comp134171_c2_seq1.mrna1
Chr2	gffcl	locus	107780	146642	.	-	.	ID=RLOC_00013952;geneIDs=FBgn0013733.1.path1,comp118901_c0_seq1.path1,comp160415_c3_seq1.path1;transcripts=FBgn0013733.1.mrna1,comp118901_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107780	146642	.	-	.	ID=FBgn0013733.1.mrna1;geneID=FBgn0013733.1.path1;Name=FBgn0013733.1;Dir=sensecoverage=100.0;identity=99.8;matches=20691;mismatches=8;indels=37;unknowns=0;locus=RLOC_00013952
Chr2	stalkie_big_nohaplotig	exon	107780	107825	91	-	.	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 20655 20700 +
Chr2	stalkie_big_nohaplotig	exon	107908	107927	95	-	.	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 20635 20654 +
Chr2	stalkie_big_nohaplotig	exon	121627	121835	80	-	.	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 20462 20633 +
Chr2	stalkie_big_nohaplotig	exon	121895	122012	100	-	.	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 20344 20461 +
Chr2	stalkie_big_nohaplotig	exon	122069	122243	100	-	.	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 20169 20343 +
Chr2	stalkie_big_nohaplotig	exon	122411	122482	100	-	.	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 20097 20168 +
Chr2	stalkie_big_nohaplotig	exon	122680	122724	100	-	.	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 20052 20096 +
Chr2	stalkie_big_nohaplotig	exon	123354	123528	100	-	.	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 19877 20051 +
Chr2	stalkie_big_nohaplotig	exon	123602	125561	100	-	.	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 17917 19876 +
Chr2	stalkie_big_nohaplotig	exon	126689	126914	100	-	.	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 17691 17916 +
Chr2	stalkie_big_nohaplotig	exon	127258	134735	100	-	.	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 10213 17690 +
Chr2	stalkie_big_nohaplotig	exon	134810	134956	100	-	.	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 10066 10212 +
Chr2	stalkie_big_nohaplotig	exon	136473	146406	100	-	.	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 132 10065 +
Chr2	stalkie_big_nohaplotig	exon	146512	146642	100	-	.	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 1 131 +
Chr2	stalkie_big_nohaplotig	CDS	107780	107825	.	-	1	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 20655 20700 +
Chr2	stalkie_big_nohaplotig	CDS	107908	107927	.	-	0	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 20635 20654 +
Chr2	stalkie_big_nohaplotig	CDS	121627	121835	.	-	2	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 20462 20633 +
Chr2	stalkie_big_nohaplotig	CDS	121895	122012	.	-	0	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 20344 20461 +
Chr2	stalkie_big_nohaplotig	CDS	122069	122243	.	-	1	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 20169 20343 +
Chr2	stalkie_big_nohaplotig	CDS	122411	122482	.	-	1	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 20097 20168 +
Chr2	stalkie_big_nohaplotig	CDS	122680	122724	.	-	1	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 20052 20096 +
Chr2	stalkie_big_nohaplotig	CDS	123354	123528	.	-	2	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 19877 20051 +
Chr2	stalkie_big_nohaplotig	CDS	123602	125561	.	-	0	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 17917 19876 +
Chr2	stalkie_big_nohaplotig	CDS	126689	126914	.	-	1	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 17691 17916 +
Chr2	stalkie_big_nohaplotig	CDS	127258	134735	.	-	0	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 10213 17690 +
Chr2	stalkie_big_nohaplotig	CDS	134810	134956	.	-	0	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 10066 10212 +
Chr2	stalkie_big_nohaplotig	CDS	136473	146406	.	-	1	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 132 10065 +
Chr2	stalkie_big_nohaplotig	CDS	146512	146642	.	-	0	Parent=FBgn0013733.1.mrna1;Target=FBgn0013733.1 1 131 +
Chr2	stalkie_big_nohaplotig	mRNA	135736	136495	.	-	.	ID=comp118901_c0_seq1.mrna1;geneID=comp118901_c0_seq1.path1;Name=comp118901_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=401;mismatches=0;indels=0;unknowns=0;Target=comp118901_c0_seq1 66 254 +;locus=RLOC_00013952
Chr2	stalkie_big_nohaplotig	exon	135736	136113	100	-	.	Parent=comp118901_c0_seq1.mrna1;Target=comp118901_c0_seq1 24 401 +
Chr2	stalkie_big_nohaplotig	exon	136473	136495	100	-	.	Parent=comp118901_c0_seq1.mrna1;Target=comp118901_c0_seq1 1 23 +
Chr2	stalkie_big_nohaplotig	CDS	135883	136071	.	-	0	Parent=comp118901_c0_seq1.mrna1
Chr2	gffcl	locus	117893	118443	.	+	.	ID=RLOC_00013953;geneIDs=comp47809_c0_seq1.path1;transcripts=comp47809_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	117893	118443	.	+	.	ID=comp47809_c0_seq1.mrna1;geneID=comp47809_c0_seq1.path1;Name=comp47809_c0_seq1;Dir=indeterminatecoverage=97.2;identity=100.0;matches=551;mismatches=0;indels=0;unknowns=0;Target=comp47809_c0_seq1 567 17 .;CDS_Target=comp47809_c0_seq1 244 197 .;locus=RLOC_00013953
Chr2	stalkie_big_nohaplotig	exon	117893	118443	100	+	.	Parent=comp47809_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118073	118120	.	+	0	Parent=comp47809_c0_seq1.mrna1
Chr2	gffcl	locus	119328	119764	.	-	.	ID=RLOC_00013954;geneIDs=comp52158_c0_seq1.path1;transcripts=comp52158_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	119328	119764	.	-	.	ID=comp52158_c0_seq1.mrna1;geneID=comp52158_c0_seq1.path1;Name=comp52158_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=437;mismatches=0;indels=0;unknowns=0;Target=comp52158_c0_seq1 437 1 .;CDS_Target=comp52158_c0_seq1 437 312 .;locus=RLOC_00013954
Chr2	stalkie_big_nohaplotig	exon	119328	119764	100	-	.	Parent=comp52158_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	119328	119453	.	-	0	Parent=comp52158_c0_seq1.mrna1
Chr2	gffcl	locus	209752	214383	.	+	.	ID=RLOC_00013955;geneIDs=FBgn0029082.1.path1;transcripts=FBgn0029082.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	209752	214383	.	+	.	ID=FBgn0029082.1.mrna1;geneID=FBgn0029082.1.path1;Name=FBgn0029082.1;Dir=sensecoverage=99.9;identity=100.0;matches=3760;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013955
Chr2	stalkie_big_nohaplotig	exon	209752	209899	100	+	.	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 1 148 +
Chr2	stalkie_big_nohaplotig	exon	210088	210579	100	+	.	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 149 640 +
Chr2	stalkie_big_nohaplotig	exon	210647	210820	100	+	.	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 641 814 +
Chr2	stalkie_big_nohaplotig	exon	210882	211035	100	+	.	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 815 968 +
Chr2	stalkie_big_nohaplotig	exon	211097	211233	100	+	.	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 969 1105 +
Chr2	stalkie_big_nohaplotig	exon	211303	211602	100	+	.	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 1106 1405 +
Chr2	stalkie_big_nohaplotig	exon	211664	211954	100	+	.	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 1406 1696 +
Chr2	stalkie_big_nohaplotig	exon	212021	212323	100	+	.	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 1697 1999 +
Chr2	stalkie_big_nohaplotig	exon	212383	212667	100	+	.	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 2000 2284 +
Chr2	stalkie_big_nohaplotig	exon	212740	213021	100	+	.	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 2285 2566 +
Chr2	stalkie_big_nohaplotig	exon	213080	213670	100	+	.	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 2567 3157 +
Chr2	stalkie_big_nohaplotig	exon	213727	213938	100	+	.	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 3158 3369 +
Chr2	stalkie_big_nohaplotig	exon	213993	214383	100	+	.	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 3370 3760 +
Chr2	stalkie_big_nohaplotig	CDS	209752	209899	.	+	0	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 1 148 +
Chr2	stalkie_big_nohaplotig	CDS	210088	210579	.	+	2	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 149 640 +
Chr2	stalkie_big_nohaplotig	CDS	210647	210820	.	+	2	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 641 814 +
Chr2	stalkie_big_nohaplotig	CDS	210882	211035	.	+	2	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 815 968 +
Chr2	stalkie_big_nohaplotig	CDS	211097	211233	.	+	1	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 969 1105 +
Chr2	stalkie_big_nohaplotig	CDS	211303	211602	.	+	2	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 1106 1405 +
Chr2	stalkie_big_nohaplotig	CDS	211664	211954	.	+	2	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 1406 1696 +
Chr2	stalkie_big_nohaplotig	CDS	212021	212323	.	+	2	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 1697 1999 +
Chr2	stalkie_big_nohaplotig	CDS	212383	212667	.	+	2	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 2000 2284 +
Chr2	stalkie_big_nohaplotig	CDS	212740	213021	.	+	2	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 2285 2566 +
Chr2	stalkie_big_nohaplotig	CDS	213080	213670	.	+	2	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 2567 3157 +
Chr2	stalkie_big_nohaplotig	CDS	213727	213938	.	+	2	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 3158 3369 +
Chr2	stalkie_big_nohaplotig	CDS	213993	214382	.	+	0	Parent=FBgn0029082.1.mrna1;Target=FBgn0029082.1 3370 3759 +
Chr2	gffcl	locus	269332	320193	.	+	.	ID=RLOC_00013956;geneIDs=FBgn0024189.1.path1,comp161089_c2_seq1.path1;transcripts=FBgn0024189.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	269332	320193	.	+	.	ID=FBgn0024189.1.mrna1;geneID=FBgn0024189.1.path1;Name=FBgn0024189.1;Dir=sensecoverage=100.0;identity=100.0;matches=2988;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013956
Chr2	stalkie_big_nohaplotig	exon	269332	269656	100	+	.	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 1 325 +
Chr2	stalkie_big_nohaplotig	exon	284654	284806	100	+	.	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 326 478 +
Chr2	stalkie_big_nohaplotig	exon	297113	297286	100	+	.	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 479 652 +
Chr2	stalkie_big_nohaplotig	exon	300534	300687	100	+	.	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 653 806 +
Chr2	stalkie_big_nohaplotig	exon	300754	300890	100	+	.	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 807 943 +
Chr2	stalkie_big_nohaplotig	exon	307570	307737	100	+	.	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 944 1111 +
Chr2	stalkie_big_nohaplotig	exon	307877	308008	100	+	.	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 1112 1243 +
Chr2	stalkie_big_nohaplotig	exon	316313	316449	100	+	.	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 1244 1380 +
Chr2	stalkie_big_nohaplotig	exon	317533	317686	100	+	.	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 1381 1534 +
Chr2	stalkie_big_nohaplotig	exon	317786	317923	100	+	.	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 1535 1672 +
Chr2	stalkie_big_nohaplotig	exon	318539	318703	100	+	.	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 1673 1837 +
Chr2	stalkie_big_nohaplotig	exon	318778	319062	100	+	.	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 1838 2122 +
Chr2	stalkie_big_nohaplotig	exon	319172	319453	100	+	.	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 2123 2404 +
Chr2	stalkie_big_nohaplotig	exon	319556	319973	100	+	.	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 2405 2822 +
Chr2	stalkie_big_nohaplotig	exon	320028	320193	100	+	.	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 2823 2988 +
Chr2	stalkie_big_nohaplotig	CDS	269332	269656	.	+	0	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 1 325 +
Chr2	stalkie_big_nohaplotig	CDS	284654	284806	.	+	2	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 326 478 +
Chr2	stalkie_big_nohaplotig	CDS	297113	297286	.	+	2	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 479 652 +
Chr2	stalkie_big_nohaplotig	CDS	300534	300687	.	+	2	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 653 806 +
Chr2	stalkie_big_nohaplotig	CDS	300754	300890	.	+	1	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 807 943 +
Chr2	stalkie_big_nohaplotig	CDS	307570	307737	.	+	2	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 944 1111 +
Chr2	stalkie_big_nohaplotig	CDS	307877	308008	.	+	2	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 1112 1243 +
Chr2	stalkie_big_nohaplotig	CDS	316313	316449	.	+	2	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 1244 1380 +
Chr2	stalkie_big_nohaplotig	CDS	317533	317686	.	+	0	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 1381 1534 +
Chr2	stalkie_big_nohaplotig	CDS	317786	317923	.	+	2	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 1535 1672 +
Chr2	stalkie_big_nohaplotig	CDS	318539	318703	.	+	2	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 1673 1837 +
Chr2	stalkie_big_nohaplotig	CDS	318778	319062	.	+	2	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 1838 2122 +
Chr2	stalkie_big_nohaplotig	CDS	319172	319453	.	+	2	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 2123 2404 +
Chr2	stalkie_big_nohaplotig	CDS	319556	319973	.	+	2	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 2405 2822 +
Chr2	stalkie_big_nohaplotig	CDS	320028	320193	.	+	1	Parent=FBgn0024189.1.mrna1;Target=FBgn0024189.1 2823 2988 +
Chr2	gffcl	locus	379831	2372582	.	+	.	ID=RLOC_00013957;geneIDs=comp162343_c5_seq1.path1;transcripts=comp162343_c5_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	379831	2372582	.	+	.	ID=comp162343_c5_seq1.mrna1;geneID=comp162343_c5_seq1.path1;Name=comp162343_c5_seq1;Dir=indeterminatecoverage=71.2;identity=99.9;matches=1649;mismatches=2;indels=0;unknowns=0;Target=comp162343_c5_seq1 840 616 .;locus=RLOC_00013957
Chr2	stalkie_big_nohaplotig	exon	379831	381453	99	+	.	Parent=comp162343_c5_seq1.mrna1;Target=comp162343_c5_seq1 2238 616 .
Chr2	stalkie_big_nohaplotig	exon	2349036	2349037	100	+	.	Parent=comp162343_c5_seq1.mrna1;Target=comp162343_c5_seq1 2240 2239 .
Chr2	stalkie_big_nohaplotig	exon	2363778	2363785	100	+	.	Parent=comp162343_c5_seq1.mrna1;Target=comp162343_c5_seq1 2248 2241 .
Chr2	stalkie_big_nohaplotig	exon	2370283	2370294	100	+	.	Parent=comp162343_c5_seq1.mrna1;Target=comp162343_c5_seq1 2260 2249 .
Chr2	stalkie_big_nohaplotig	exon	2372577	2372582	100	+	.	Parent=comp162343_c5_seq1.mrna1;Target=comp162343_c5_seq1 2268 2263 .
Chr2	stalkie_big_nohaplotig	CDS	379831	380055	.	+	0	Parent=comp162343_c5_seq1.mrna1
Chr2	gffcl	locus	381470	384340	.	-	.	ID=RLOC_00013958;geneIDs=comp161919_c0_seq1.path1;transcripts=comp161919_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	381470	384340	.	-	.	ID=comp161919_c0_seq1.mrna1;geneID=comp161919_c0_seq1.path1;Name=comp161919_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2870;mismatches=1;indels=1;unknowns=0;Target=comp161919_c0_seq1 2872 1 .;CDS_Target=comp161919_c0_seq1 1918 1730 .;locus=RLOC_00013958
Chr2	stalkie_big_nohaplotig	exon	381470	384340	99	-	.	Parent=comp161919_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	382424	382612	.	-	0	Parent=comp161919_c0_seq1.mrna1
Chr2	gffcl	locus	385996	386652	.	-	.	ID=RLOC_00013959;geneIDs=comp154036_c0_seq1.path1;transcripts=comp154036_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	385996	386652	.	-	.	ID=comp154036_c0_seq1.mrna1;geneID=comp154036_c0_seq1.path1;Name=comp154036_c0_seq1;Dir=indeterminatecoverage=97.3;identity=99.8;matches=656;mismatches=1;indels=0;unknowns=0;Target=comp154036_c0_seq1 657 1 .;CDS_Target=comp154036_c0_seq1 478 392 .;locus=RLOC_00013959
Chr2	stalkie_big_nohaplotig	exon	385996	386652	99	-	.	Parent=comp154036_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	386175	386261	.	-	0	Parent=comp154036_c0_seq1.mrna1
Chr2	gffcl	locus	402751	404693	.	-	.	ID=RLOC_00013960;geneIDs=comp159355_c3_seq1.path1;transcripts=comp159355_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	402751	404693	.	-	.	ID=comp159355_c3_seq1.mrna1;geneID=comp159355_c3_seq1.path1;Name=comp159355_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1934;mismatches=8;indels=5;unknowns=0;Target=comp159355_c3_seq1 1946 1 .;CDS_Target=comp159355_c3_seq1 1185 1057 .;locus=RLOC_00013960
Chr2	stalkie_big_nohaplotig	exon	402751	404693	99	-	.	Parent=comp159355_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	403512	403637	.	-	0	Parent=comp159355_c3_seq1.mrna1
Chr2	gffcl	locus	414500	451227	.	.	.	ID=RLOC_00013961;geneIDs=FBgn0011286.1.path1,comp51231_c0_seq1.path1,comp54510_c0_seq1.path1,comp87930_c0_seq1.path1,comp97507_c0_seq1.path1,comp1401888_c0_seq1.path1;transcripts=FBgn0011286.1.mrna1,comp87930_c0_seq1.mrna1,comp1401888_c0_seq1.mrna1,comp51231_c0_seq1.mrna1,comp97507_c0_seq1.mrna1,comp54510_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	414500	451227	.	+	.	ID=FBgn0011286.1.mrna1;geneID=FBgn0011286.1.path1;Name=FBgn0011286.1;Dir=sensecoverage=100.0;identity=99.9;matches=15369;mismatches=18;indels=0;unknowns=0;locus=RLOC_00013961
Chr2	stalkie_big_nohaplotig	exon	414500	414571	100	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 1 72 +
Chr2	stalkie_big_nohaplotig	exon	429467	429670	100	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 73 276 +
Chr2	stalkie_big_nohaplotig	exon	430955	431032	98	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 277 354 +
Chr2	stalkie_big_nohaplotig	exon	431094	431282	99	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 355 543 +
Chr2	stalkie_big_nohaplotig	exon	431370	431569	100	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 544 743 +
Chr2	stalkie_big_nohaplotig	exon	431633	431807	100	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 744 918 +
Chr2	stalkie_big_nohaplotig	exon	432101	432450	100	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 919 1268 +
Chr2	stalkie_big_nohaplotig	exon	432525	432649	100	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 1269 1393 +
Chr2	stalkie_big_nohaplotig	exon	432714	433278	99	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 1394 1958 +
Chr2	stalkie_big_nohaplotig	exon	433332	433472	100	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 1959 2099 +
Chr2	stalkie_big_nohaplotig	exon	433535	433831	100	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 2100 2396 +
Chr2	stalkie_big_nohaplotig	exon	433897	434316	99	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 2397 2816 +
Chr2	stalkie_big_nohaplotig	exon	434372	434975	100	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 2817 3420 +
Chr2	stalkie_big_nohaplotig	exon	435573	435672	100	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 3421 3520 +
Chr2	stalkie_big_nohaplotig	exon	436384	436588	100	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 3521 3725 +
Chr2	stalkie_big_nohaplotig	exon	436658	437405	99	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 3726 4473 +
Chr2	stalkie_big_nohaplotig	exon	437477	438633	100	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 4474 5630 +
Chr2	stalkie_big_nohaplotig	exon	438966	439163	100	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 5631 5828 +
Chr2	stalkie_big_nohaplotig	exon	439225	439340	100	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 5829 5944 +
Chr2	stalkie_big_nohaplotig	exon	439395	441667	99	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 5945 8217 +
Chr2	stalkie_big_nohaplotig	exon	441732	442211	99	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 8218 8697 +
Chr2	stalkie_big_nohaplotig	exon	442422	442559	100	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 8698 8835 +
Chr2	stalkie_big_nohaplotig	exon	442707	442993	100	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 8836 9122 +
Chr2	stalkie_big_nohaplotig	exon	443053	445144	99	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 9123 11214 +
Chr2	stalkie_big_nohaplotig	exon	445415	445527	100	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 11215 11327 +
Chr2	stalkie_big_nohaplotig	exon	446426	446774	100	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 11328 11676 +
Chr2	stalkie_big_nohaplotig	exon	446974	447274	100	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 11677 11977 +
Chr2	stalkie_big_nohaplotig	exon	447616	447726	100	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 11978 12088 +
Chr2	stalkie_big_nohaplotig	exon	447793	448212	99	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 12089 12508 +
Chr2	stalkie_big_nohaplotig	exon	448275	448476	100	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 12509 12710 +
Chr2	stalkie_big_nohaplotig	exon	448551	451227	99	+	.	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 12711 15387 +
Chr2	stalkie_big_nohaplotig	CDS	414500	414571	.	+	0	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 1 72 +
Chr2	stalkie_big_nohaplotig	CDS	429467	429670	.	+	0	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 73 276 +
Chr2	stalkie_big_nohaplotig	CDS	430955	431032	.	+	0	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 277 354 +
Chr2	stalkie_big_nohaplotig	CDS	431094	431282	.	+	0	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 355 543 +
Chr2	stalkie_big_nohaplotig	CDS	431370	431569	.	+	0	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 544 743 +
Chr2	stalkie_big_nohaplotig	CDS	431633	431807	.	+	1	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 744 918 +
Chr2	stalkie_big_nohaplotig	CDS	432101	432450	.	+	0	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 919 1268 +
Chr2	stalkie_big_nohaplotig	CDS	432525	432649	.	+	1	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 1269 1393 +
Chr2	stalkie_big_nohaplotig	CDS	432714	433278	.	+	2	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 1394 1958 +
Chr2	stalkie_big_nohaplotig	CDS	433332	433472	.	+	1	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 1959 2099 +
Chr2	stalkie_big_nohaplotig	CDS	433535	433831	.	+	1	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 2100 2396 +
Chr2	stalkie_big_nohaplotig	CDS	433897	434316	.	+	1	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 2397 2816 +
Chr2	stalkie_big_nohaplotig	CDS	434372	434975	.	+	1	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 2817 3420 +
Chr2	stalkie_big_nohaplotig	CDS	435573	435672	.	+	0	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 3421 3520 +
Chr2	stalkie_big_nohaplotig	CDS	436384	436588	.	+	2	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 3521 3725 +
Chr2	stalkie_big_nohaplotig	CDS	436658	437405	.	+	1	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 3726 4473 +
Chr2	stalkie_big_nohaplotig	CDS	437477	438633	.	+	0	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 4474 5630 +
Chr2	stalkie_big_nohaplotig	CDS	438966	439163	.	+	1	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 5631 5828 +
Chr2	stalkie_big_nohaplotig	CDS	439225	439340	.	+	1	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 5829 5944 +
Chr2	stalkie_big_nohaplotig	CDS	439395	441667	.	+	2	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 5945 8217 +
Chr2	stalkie_big_nohaplotig	CDS	441732	442211	.	+	0	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 8218 8697 +
Chr2	stalkie_big_nohaplotig	CDS	442422	442559	.	+	0	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 8698 8835 +
Chr2	stalkie_big_nohaplotig	CDS	442707	442993	.	+	0	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 8836 9122 +
Chr2	stalkie_big_nohaplotig	CDS	443053	445144	.	+	1	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 9123 11214 +
Chr2	stalkie_big_nohaplotig	CDS	445415	445527	.	+	0	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 11215 11327 +
Chr2	stalkie_big_nohaplotig	CDS	446426	446774	.	+	1	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 11328 11676 +
Chr2	stalkie_big_nohaplotig	CDS	446974	447274	.	+	0	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 11677 11977 +
Chr2	stalkie_big_nohaplotig	CDS	447616	447726	.	+	2	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 11978 12088 +
Chr2	stalkie_big_nohaplotig	CDS	447793	448212	.	+	2	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 12089 12508 +
Chr2	stalkie_big_nohaplotig	CDS	448275	448476	.	+	2	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 12509 12710 +
Chr2	stalkie_big_nohaplotig	CDS	448551	451227	.	+	1	Parent=FBgn0011286.1.mrna1;Target=FBgn0011286.1 12711 15387 +
Chr2	stalkie_big_nohaplotig	mRNA	435308	435622	.	+	.	ID=comp87930_c0_seq1.mrna1;geneID=comp87930_c0_seq1.path1;Name=comp87930_c0_seq1;Dir=indeterminatecoverage=99.4;identity=96.9;matches=312;mismatches=3;indels=7;unknowns=0;Target=comp87930_c0_seq1 324 3 .;CDS_Target=comp87930_c0_seq1 57 4 .;locus=RLOC_00013961
Chr2	stalkie_big_nohaplotig	exon	435308	435622	96	+	.	Parent=comp87930_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	435309	435362	.	+	0	Parent=comp87930_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	435652	436406	.	+	.	ID=comp1401888_c0_seq1.mrna1;geneID=comp1401888_c0_seq1.path1;Name=comp1401888_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=755;mismatches=0;indels=0;unknowns=0;Target=comp1401888_c0_seq1 755 1 .;CDS_Target=comp1401888_c0_seq1 610 479 .;locus=RLOC_00013961
Chr2	stalkie_big_nohaplotig	exon	435652	436406	100	+	.	Parent=comp1401888_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	436130	436261	.	+	0	Parent=comp1401888_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	438610	438989	.	-	.	ID=comp51231_c0_seq1.mrna1;geneID=comp51231_c0_seq1.path1;Name=comp51231_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=378;mismatches=2;indels=0;unknowns=0;Target=comp51231_c0_seq1 380 1 .;CDS_Target=comp51231_c0_seq1 322 251 .;locus=RLOC_00013961
Chr2	stalkie_big_nohaplotig	exon	438610	438989	99	-	.	Parent=comp51231_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	438668	438739	.	-	0	Parent=comp51231_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	442116	442442	.	-	.	ID=comp97507_c0_seq1.mrna1;geneID=comp97507_c0_seq1.path1;Name=comp97507_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.6;matches=313;mismatches=10;indels=8;unknowns=0;Target=comp97507_c0_seq1 327 1 .;CDS_Target=comp97507_c0_seq1 71 3 .;locus=RLOC_00013961
Chr2	stalkie_big_nohaplotig	exon	442116	442442	94	-	.	Parent=comp97507_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	442376	442440	.	-	0	Parent=comp97507_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	446752	446994	.	+	.	ID=comp54510_c0_seq1.mrna1;geneID=comp54510_c0_seq1.path1;Name=comp54510_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=243;mismatches=0;indels=0;unknowns=0;Target=comp54510_c0_seq1 243 1 .;CDS_Target=comp54510_c0_seq1 118 2 .;locus=RLOC_00013961
Chr2	stalkie_big_nohaplotig	exon	446752	446994	100	+	.	Parent=comp54510_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	446753	446869	.	+	0	Parent=comp54510_c0_seq1.mrna1
Chr2	gffcl	locus	451649	454016	.	-	.	ID=RLOC_00013962;geneIDs=FBgn0020309.4.path1;transcripts=FBgn0020309.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	451649	454016	.	-	.	ID=FBgn0020309.4.mrna1;geneID=FBgn0020309.4.path1;Name=FBgn0020309.4;Dir=sensecoverage=100.0;identity=100.0;matches=2181;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013962
Chr2	stalkie_big_nohaplotig	exon	451649	453036	100	-	.	Parent=FBgn0020309.4.mrna1;Target=FBgn0020309.4 794 2181 +
Chr2	stalkie_big_nohaplotig	exon	453101	453220	100	-	.	Parent=FBgn0020309.4.mrna1;Target=FBgn0020309.4 674 793 +
Chr2	stalkie_big_nohaplotig	exon	453281	453731	100	-	.	Parent=FBgn0020309.4.mrna1;Target=FBgn0020309.4 223 673 +
Chr2	stalkie_big_nohaplotig	exon	453795	454016	100	-	.	Parent=FBgn0020309.4.mrna1;Target=FBgn0020309.4 1 222 +
Chr2	stalkie_big_nohaplotig	CDS	451649	453036	.	-	2	Parent=FBgn0020309.4.mrna1;Target=FBgn0020309.4 794 2181 +
Chr2	stalkie_big_nohaplotig	CDS	453101	453220	.	-	2	Parent=FBgn0020309.4.mrna1;Target=FBgn0020309.4 674 793 +
Chr2	stalkie_big_nohaplotig	CDS	453281	453731	.	-	0	Parent=FBgn0020309.4.mrna1;Target=FBgn0020309.4 223 673 +
Chr2	stalkie_big_nohaplotig	CDS	453795	454016	.	-	0	Parent=FBgn0020309.4.mrna1;Target=FBgn0020309.4 1 222 +
Chr2	gffcl	locus	454993	459319	.	+	.	ID=RLOC_00013963;geneIDs=FBgn0000709.1.path1;transcripts=FBgn0000709.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	454993	459319	.	+	.	ID=FBgn0000709.1.mrna1;geneID=FBgn0000709.1.path1;Name=FBgn0000709.1;Dir=sensecoverage=100.0;identity=99.9;matches=3757;mismatches=5;indels=0;unknowns=0;locus=RLOC_00013963
Chr2	stalkie_big_nohaplotig	exon	454993	455055	100	+	.	Parent=FBgn0000709.1.mrna1;Target=FBgn0000709.1 1 63 +
Chr2	stalkie_big_nohaplotig	exon	455311	457018	99	+	.	Parent=FBgn0000709.1.mrna1;Target=FBgn0000709.1 64 1771 +
Chr2	stalkie_big_nohaplotig	exon	457077	457418	100	+	.	Parent=FBgn0000709.1.mrna1;Target=FBgn0000709.1 1772 2113 +
Chr2	stalkie_big_nohaplotig	exon	457475	458561	100	+	.	Parent=FBgn0000709.1.mrna1;Target=FBgn0000709.1 2114 3200 +
Chr2	stalkie_big_nohaplotig	exon	458623	458773	100	+	.	Parent=FBgn0000709.1.mrna1;Target=FBgn0000709.1 3201 3351 +
Chr2	stalkie_big_nohaplotig	exon	458839	459117	100	+	.	Parent=FBgn0000709.1.mrna1;Target=FBgn0000709.1 3352 3630 +
Chr2	stalkie_big_nohaplotig	exon	459188	459319	100	+	.	Parent=FBgn0000709.1.mrna1;Target=FBgn0000709.1 3631 3762 +
Chr2	stalkie_big_nohaplotig	CDS	454993	455055	.	+	0	Parent=FBgn0000709.1.mrna1;Target=FBgn0000709.1 1 63 +
Chr2	stalkie_big_nohaplotig	CDS	455311	457018	.	+	0	Parent=FBgn0000709.1.mrna1;Target=FBgn0000709.1 64 1771 +
Chr2	stalkie_big_nohaplotig	CDS	457077	457418	.	+	2	Parent=FBgn0000709.1.mrna1;Target=FBgn0000709.1 1772 2113 +
Chr2	stalkie_big_nohaplotig	CDS	457475	458561	.	+	2	Parent=FBgn0000709.1.mrna1;Target=FBgn0000709.1 2114 3200 +
Chr2	stalkie_big_nohaplotig	CDS	458623	458773	.	+	1	Parent=FBgn0000709.1.mrna1;Target=FBgn0000709.1 3201 3351 +
Chr2	stalkie_big_nohaplotig	CDS	458839	459117	.	+	0	Parent=FBgn0000709.1.mrna1;Target=FBgn0000709.1 3352 3630 +
Chr2	stalkie_big_nohaplotig	CDS	459188	459319	.	+	0	Parent=FBgn0000709.1.mrna1;Target=FBgn0000709.1 3631 3762 +
Chr2	gffcl	locus	460246	463916	.	-	.	ID=RLOC_00013964;geneIDs=FBgn0033337.1.path1;transcripts=FBgn0033337.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	460246	463916	.	-	.	ID=FBgn0033337.1.mrna1;geneID=FBgn0033337.1.path1;Name=FBgn0033337.1;Dir=sensecoverage=100.0;identity=99.7;matches=2037;mismatches=6;indels=0;unknowns=0;locus=RLOC_00013964
Chr2	stalkie_big_nohaplotig	exon	460246	460392	100	-	.	Parent=FBgn0033337.1.mrna1;Target=FBgn0033337.1 1897 2043 +
Chr2	stalkie_big_nohaplotig	exon	461775	462371	99	-	.	Parent=FBgn0033337.1.mrna1;Target=FBgn0033337.1 1300 1896 +
Chr2	stalkie_big_nohaplotig	exon	462433	463677	99	-	.	Parent=FBgn0033337.1.mrna1;Target=FBgn0033337.1 55 1299 +
Chr2	stalkie_big_nohaplotig	exon	463863	463916	100	-	.	Parent=FBgn0033337.1.mrna1;Target=FBgn0033337.1 1 54 +
Chr2	stalkie_big_nohaplotig	CDS	460246	460392	.	-	0	Parent=FBgn0033337.1.mrna1;Target=FBgn0033337.1 1897 2043 +
Chr2	stalkie_big_nohaplotig	CDS	461775	462371	.	-	0	Parent=FBgn0033337.1.mrna1;Target=FBgn0033337.1 1300 1896 +
Chr2	stalkie_big_nohaplotig	CDS	462433	463677	.	-	0	Parent=FBgn0033337.1.mrna1;Target=FBgn0033337.1 55 1299 +
Chr2	stalkie_big_nohaplotig	CDS	463863	463916	.	-	0	Parent=FBgn0033337.1.mrna1;Target=FBgn0033337.1 1 54 +
Chr2	gffcl	locus	479462	488330	.	-	.	ID=RLOC_00013965;geneIDs=FBgn0261613.1.path1;transcripts=FBgn0261613.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	479462	488330	.	-	.	ID=FBgn0261613.1.mrna1;geneID=FBgn0261613.1.path1;Name=FBgn0261613.1;Dir=sensecoverage=100.0;identity=100.0;matches=3800;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013965
Chr2	stalkie_big_nohaplotig	exon	479462	480185	100	-	.	Parent=FBgn0261613.1.mrna1;Target=FBgn0261613.1 3078 3801 +
Chr2	stalkie_big_nohaplotig	exon	480270	482582	99	-	.	Parent=FBgn0261613.1.mrna1;Target=FBgn0261613.1 765 3077 +
Chr2	stalkie_big_nohaplotig	exon	482736	482878	100	-	.	Parent=FBgn0261613.1.mrna1;Target=FBgn0261613.1 622 764 +
Chr2	stalkie_big_nohaplotig	exon	485332	485840	100	-	.	Parent=FBgn0261613.1.mrna1;Target=FBgn0261613.1 113 621 +
Chr2	stalkie_big_nohaplotig	exon	488219	488330	100	-	.	Parent=FBgn0261613.1.mrna1;Target=FBgn0261613.1 1 112 +
Chr2	stalkie_big_nohaplotig	CDS	479462	480185	.	-	1	Parent=FBgn0261613.1.mrna1;Target=FBgn0261613.1 3078 3801 +
Chr2	stalkie_big_nohaplotig	CDS	480270	482582	.	-	1	Parent=FBgn0261613.1.mrna1;Target=FBgn0261613.1 765 3077 +
Chr2	stalkie_big_nohaplotig	CDS	482736	482878	.	-	0	Parent=FBgn0261613.1.mrna1;Target=FBgn0261613.1 622 764 +
Chr2	stalkie_big_nohaplotig	CDS	485332	485840	.	-	2	Parent=FBgn0261613.1.mrna1;Target=FBgn0261613.1 113 621 +
Chr2	stalkie_big_nohaplotig	CDS	488219	488330	.	-	0	Parent=FBgn0261613.1.mrna1;Target=FBgn0261613.1 1 112 +
Chr2	gffcl	locus	535465	540668	.	+	.	ID=RLOC_00013967;geneIDs=FBgn0013725.1.path1;transcripts=FBgn0013725.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	535465	540668	.	+	.	ID=FBgn0013725.1.mrna1;geneID=FBgn0013725.1.path1;Name=FBgn0013725.1;Dir=sensecoverage=100.0;identity=100.0;matches=1299;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013967
Chr2	stalkie_big_nohaplotig	exon	535465	535608	100	+	.	Parent=FBgn0013725.1.mrna1;Target=FBgn0013725.1 1 144 +
Chr2	stalkie_big_nohaplotig	exon	539514	540668	100	+	.	Parent=FBgn0013725.1.mrna1;Target=FBgn0013725.1 145 1299 +
Chr2	stalkie_big_nohaplotig	CDS	535465	535608	.	+	0	Parent=FBgn0013725.1.mrna1;Target=FBgn0013725.1 1 144 +
Chr2	stalkie_big_nohaplotig	CDS	539514	540668	.	+	0	Parent=FBgn0013725.1.mrna1;Target=FBgn0013725.1 145 1299 +
Chr2	gffcl	locus	567724	568034	.	+	.	ID=RLOC_00013968;geneIDs=comp116157_c0_seq1.path1;transcripts=comp116157_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	567724	568034	.	+	.	ID=comp116157_c0_seq1.mrna1;geneID=comp116157_c0_seq1.path1;Name=comp116157_c0_seq1;Dir=indeterminatecoverage=93.4;identity=99.7;matches=310;mismatches=1;indels=0;unknowns=0;Target=comp116157_c0_seq1 312 2 .;CDS_Target=comp116157_c0_seq1 133 2 .;locus=RLOC_00013968
Chr2	stalkie_big_nohaplotig	exon	567724	568034	99	+	.	Parent=comp116157_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	567724	567855	.	+	0	Parent=comp116157_c0_seq1.mrna1
Chr2	gffcl	locus	574458	576905	.	+	.	ID=RLOC_00013969;geneIDs=FBgn0034091.1.path1,comp140261_c0_seq1.path1;transcripts=FBgn0034091.1.mrna1,comp140261_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	574458	576905	.	+	.	ID=FBgn0034091.1.mrna1;geneID=FBgn0034091.1.path1;Name=FBgn0034091.1;Dir=sensecoverage=100.0;identity=100.0;matches=822;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013969
Chr2	stalkie_big_nohaplotig	exon	574458	574603	100	+	.	Parent=FBgn0034091.1.mrna1;Target=FBgn0034091.1 1 146 +
Chr2	stalkie_big_nohaplotig	exon	574662	574771	100	+	.	Parent=FBgn0034091.1.mrna1;Target=FBgn0034091.1 147 256 +
Chr2	stalkie_big_nohaplotig	exon	576194	576397	100	+	.	Parent=FBgn0034091.1.mrna1;Target=FBgn0034091.1 257 460 +
Chr2	stalkie_big_nohaplotig	exon	576475	576733	100	+	.	Parent=FBgn0034091.1.mrna1;Target=FBgn0034091.1 461 719 +
Chr2	stalkie_big_nohaplotig	exon	576803	576905	100	+	.	Parent=FBgn0034091.1.mrna1;Target=FBgn0034091.1 720 822 +
Chr2	stalkie_big_nohaplotig	CDS	574458	574603	.	+	0	Parent=FBgn0034091.1.mrna1;Target=FBgn0034091.1 1 146 +
Chr2	stalkie_big_nohaplotig	CDS	574662	574771	.	+	1	Parent=FBgn0034091.1.mrna1;Target=FBgn0034091.1 147 256 +
Chr2	stalkie_big_nohaplotig	CDS	576194	576397	.	+	2	Parent=FBgn0034091.1.mrna1;Target=FBgn0034091.1 257 460 +
Chr2	stalkie_big_nohaplotig	CDS	576475	576733	.	+	2	Parent=FBgn0034091.1.mrna1;Target=FBgn0034091.1 461 719 +
Chr2	stalkie_big_nohaplotig	CDS	576803	576905	.	+	1	Parent=FBgn0034091.1.mrna1;Target=FBgn0034091.1 720 822 +
Chr2	stalkie_big_nohaplotig	mRNA	574748	575544	.	+	.	ID=comp140261_c0_seq1.mrna1;geneID=comp140261_c0_seq1.path1;Name=comp140261_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=681;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013969
Chr2	stalkie_big_nohaplotig	exon	574748	574771	100	+	.	Parent=comp140261_c0_seq1.mrna1;Target=comp140261_c0_seq1 661 684 -
Chr2	stalkie_big_nohaplotig	exon	574885	575544	99	+	.	Parent=comp140261_c0_seq1.mrna1;Target=comp140261_c0_seq1 1 660 -
Chr2	stalkie_big_nohaplotig	CDS	574750	574771	.	+	0	Parent=comp140261_c0_seq1.mrna1;Target=comp140261_c0_seq1 661 682 .
Chr2	stalkie_big_nohaplotig	CDS	574885	575366	.	+	2	Parent=comp140261_c0_seq1.mrna1;Target=comp140261_c0_seq1 179 660 .
Chr2	gffcl	locus	580003	580601	.	+	.	ID=RLOC_00013970;geneIDs=comp147709_c0_seq1.path1;transcripts=comp147709_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	580003	580601	.	+	.	ID=comp147709_c0_seq1.mrna1;geneID=comp147709_c0_seq1.path1;Name=comp147709_c0_seq1;Dir=indeterminatecoverage=98.8;identity=100.0;matches=599;mismatches=0;indels=0;unknowns=0;Target=comp147709_c0_seq1 600 2 .;CDS_Target=comp147709_c0_seq1 104 3 .;locus=RLOC_00013970
Chr2	stalkie_big_nohaplotig	exon	580003	580601	100	+	.	Parent=comp147709_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	580004	580105	.	+	0	Parent=comp147709_c0_seq1.mrna1
Chr2	gffcl	locus	581382	581836	.	+	.	ID=RLOC_00013971;geneIDs=comp152748_c0_seq1.path1;transcripts=comp152748_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	581382	581836	.	+	.	ID=comp152748_c0_seq1.mrna1;geneID=comp152748_c0_seq1.path1;Name=comp152748_c0_seq1;Dir=indeterminatecoverage=89.2;identity=99.8;matches=454;mismatches=1;indels=0;unknowns=0;Target=comp152748_c0_seq1 455 1 .;CDS_Target=comp152748_c0_seq1 151 2 .;locus=RLOC_00013971
Chr2	stalkie_big_nohaplotig	exon	581382	581836	99	+	.	Parent=comp152748_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	581383	581532	.	+	0	Parent=comp152748_c0_seq1.mrna1
Chr2	gffcl	locus	582798	584221	.	-	.	ID=RLOC_00013972;geneIDs=FBgn0033884.1.path1;transcripts=FBgn0033884.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	582798	584221	.	-	.	ID=FBgn0033884.1.mrna1;geneID=FBgn0033884.1.path1;Name=FBgn0033884.1;Dir=sensecoverage=100.0;identity=99.8;matches=1224;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013972
Chr2	stalkie_big_nohaplotig	exon	582798	583067	99	-	.	Parent=FBgn0033884.1.mrna1;Target=FBgn0033884.1 958 1227 +
Chr2	stalkie_big_nohaplotig	exon	583120	583951	99	-	.	Parent=FBgn0033884.1.mrna1;Target=FBgn0033884.1 126 957 +
Chr2	stalkie_big_nohaplotig	exon	584017	584088	100	-	.	Parent=FBgn0033884.1.mrna1;Target=FBgn0033884.1 54 125 +
Chr2	stalkie_big_nohaplotig	exon	584169	584221	100	-	.	Parent=FBgn0033884.1.mrna1;Target=FBgn0033884.1 1 53 +
Chr2	stalkie_big_nohaplotig	CDS	582798	583067	.	-	0	Parent=FBgn0033884.1.mrna1;Target=FBgn0033884.1 958 1227 +
Chr2	stalkie_big_nohaplotig	CDS	583120	583951	.	-	1	Parent=FBgn0033884.1.mrna1;Target=FBgn0033884.1 126 957 +
Chr2	stalkie_big_nohaplotig	CDS	584017	584088	.	-	1	Parent=FBgn0033884.1.mrna1;Target=FBgn0033884.1 54 125 +
Chr2	stalkie_big_nohaplotig	CDS	584169	584221	.	-	0	Parent=FBgn0033884.1.mrna1;Target=FBgn0033884.1 1 53 +
Chr2	gffcl	locus	591762	612330	.	+	.	ID=RLOC_00013973;geneIDs=FBgn0262476.1.path1,comp117068_c0_seq1.path1,comp117821_c0_seq1.path1,comp156450_c0_seq1.path1;transcripts=comp156450_c0_seq1.mrna1,FBgn0262476.1.mrna1,comp117068_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	591762	612330	.	+	.	ID=comp156450_c0_seq1.mrna1;geneID=comp156450_c0_seq1.path1;Name=comp156450_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=5252;mismatches=2;indels=1;unknowns=0;locus=RLOC_00013973
Chr2	stalkie_big_nohaplotig	exon	591762	592072	100	+	.	Parent=comp156450_c0_seq1.mrna1;Target=comp156450_c0_seq1 1 311 +
Chr2	stalkie_big_nohaplotig	exon	600573	601083	99	+	.	Parent=comp156450_c0_seq1.mrna1;Target=comp156450_c0_seq1 312 822 +
Chr2	stalkie_big_nohaplotig	exon	605159	605391	100	+	.	Parent=comp156450_c0_seq1.mrna1;Target=comp156450_c0_seq1 823 1055 +
Chr2	stalkie_big_nohaplotig	exon	605466	606040	100	+	.	Parent=comp156450_c0_seq1.mrna1;Target=comp156450_c0_seq1 1056 1630 +
Chr2	stalkie_big_nohaplotig	exon	606978	607125	100	+	.	Parent=comp156450_c0_seq1.mrna1;Target=comp156450_c0_seq1 1631 1778 +
Chr2	stalkie_big_nohaplotig	exon	607187	607548	100	+	.	Parent=comp156450_c0_seq1.mrna1;Target=comp156450_c0_seq1 1779 2140 +
Chr2	stalkie_big_nohaplotig	exon	607609	607771	100	+	.	Parent=comp156450_c0_seq1.mrna1;Target=comp156450_c0_seq1 2141 2303 +
Chr2	stalkie_big_nohaplotig	exon	607833	609457	99	+	.	Parent=comp156450_c0_seq1.mrna1;Target=comp156450_c0_seq1 2304 3927 +
Chr2	stalkie_big_nohaplotig	exon	611004	612330	99	+	.	Parent=comp156450_c0_seq1.mrna1;Target=comp156450_c0_seq1 3928 5254 +
Chr2	stalkie_big_nohaplotig	CDS	600816	601083	.	+	0	Parent=comp156450_c0_seq1.mrna1;Target=comp156450_c0_seq1 555 822 +
Chr2	stalkie_big_nohaplotig	CDS	605159	605391	.	+	2	Parent=comp156450_c0_seq1.mrna1;Target=comp156450_c0_seq1 823 1055 +
Chr2	stalkie_big_nohaplotig	CDS	605466	606040	.	+	0	Parent=comp156450_c0_seq1.mrna1;Target=comp156450_c0_seq1 1056 1630 +
Chr2	stalkie_big_nohaplotig	CDS	606978	607125	.	+	1	Parent=comp156450_c0_seq1.mrna1;Target=comp156450_c0_seq1 1631 1778 +
Chr2	stalkie_big_nohaplotig	CDS	607187	607548	.	+	0	Parent=comp156450_c0_seq1.mrna1;Target=comp156450_c0_seq1 1779 2140 +
Chr2	stalkie_big_nohaplotig	CDS	607609	607771	.	+	1	Parent=comp156450_c0_seq1.mrna1;Target=comp156450_c0_seq1 2141 2303 +
Chr2	stalkie_big_nohaplotig	CDS	607833	608181	.	+	0	Parent=comp156450_c0_seq1.mrna1;Target=comp156450_c0_seq1 2304 2651 +
Chr2	stalkie_big_nohaplotig	mRNA	600801	608468	.	+	.	ID=FBgn0262476.1.mrna1;geneID=FBgn0262476.1.path1;Name=FBgn0262476.1;Dir=sensecoverage=99.9;identity=100.0;matches=2040;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013973
Chr2	stalkie_big_nohaplotig	exon	600801	601083	100	+	.	Parent=FBgn0262476.1.mrna1;Target=FBgn0262476.1 1 283 +
Chr2	stalkie_big_nohaplotig	exon	605159	605391	100	+	.	Parent=FBgn0262476.1.mrna1;Target=FBgn0262476.1 284 516 +
Chr2	stalkie_big_nohaplotig	exon	605466	606040	100	+	.	Parent=FBgn0262476.1.mrna1;Target=FBgn0262476.1 517 1091 +
Chr2	stalkie_big_nohaplotig	exon	606978	607125	100	+	.	Parent=FBgn0262476.1.mrna1;Target=FBgn0262476.1 1092 1239 +
Chr2	stalkie_big_nohaplotig	exon	607187	607548	100	+	.	Parent=FBgn0262476.1.mrna1;Target=FBgn0262476.1 1240 1601 +
Chr2	stalkie_big_nohaplotig	exon	607609	607771	100	+	.	Parent=FBgn0262476.1.mrna1;Target=FBgn0262476.1 1602 1764 +
Chr2	stalkie_big_nohaplotig	exon	607833	608039	100	+	.	Parent=FBgn0262476.1.mrna1;Target=FBgn0262476.1 1765 1971 +
Chr2	stalkie_big_nohaplotig	exon	608400	608468	100	+	.	Parent=FBgn0262476.1.mrna1;Target=FBgn0262476.1 1972 2040 +
Chr2	stalkie_big_nohaplotig	CDS	600801	601083	.	+	0	Parent=FBgn0262476.1.mrna1;Target=FBgn0262476.1 1 283 +
Chr2	stalkie_big_nohaplotig	CDS	605159	605391	.	+	2	Parent=FBgn0262476.1.mrna1;Target=FBgn0262476.1 284 516 +
Chr2	stalkie_big_nohaplotig	CDS	605466	606040	.	+	0	Parent=FBgn0262476.1.mrna1;Target=FBgn0262476.1 517 1091 +
Chr2	stalkie_big_nohaplotig	CDS	606978	607125	.	+	1	Parent=FBgn0262476.1.mrna1;Target=FBgn0262476.1 1092 1239 +
Chr2	stalkie_big_nohaplotig	CDS	607187	607548	.	+	0	Parent=FBgn0262476.1.mrna1;Target=FBgn0262476.1 1240 1601 +
Chr2	stalkie_big_nohaplotig	CDS	607609	607771	.	+	1	Parent=FBgn0262476.1.mrna1;Target=FBgn0262476.1 1602 1764 +
Chr2	stalkie_big_nohaplotig	CDS	607833	608039	.	+	0	Parent=FBgn0262476.1.mrna1;Target=FBgn0262476.1 1765 1971 +
Chr2	stalkie_big_nohaplotig	CDS	608400	608468	.	+	0	Parent=FBgn0262476.1.mrna1;Target=FBgn0262476.1 1972 2040 +
Chr2	stalkie_big_nohaplotig	mRNA	610026	610753	.	+	.	ID=comp117068_c0_seq1.mrna1;geneID=comp117068_c0_seq1.path1;Name=comp117068_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=728;mismatches=0;indels=0;unknowns=0;Target=comp117068_c0_seq1 728 1 .;CDS_Target=comp117068_c0_seq1 387 301 .;locus=RLOC_00013973
Chr2	stalkie_big_nohaplotig	exon	610026	610753	100	+	.	Parent=comp117068_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	610326	610412	.	+	0	Parent=comp117068_c0_seq1.mrna1
Chr2	gffcl	locus	612338	614639	.	.	.	ID=RLOC_00013974;geneIDs=comp79588_c0_seq1.path1,comp152083_c1_seq1.path1;transcripts=comp152083_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	613338	614639	.	-	.	ID=comp152083_c1_seq1.mrna1;geneID=comp152083_c1_seq1.path1;Name=comp152083_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1302;mismatches=0;indels=0;unknowns=0;Target=comp152083_c1_seq1 1302 1 .;CDS_Target=comp152083_c1_seq1 541 476 .;locus=RLOC_00013974
Chr2	stalkie_big_nohaplotig	exon	613338	614639	100	-	.	Parent=comp152083_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	614099	614164	.	-	0	Parent=comp152083_c1_seq1.mrna1
Chr2	gffcl	locus	628397	728235	.	.	.	ID=RLOC_00013975;geneIDs=FBgn0023441.1.path1,FBgn0034035.1.path1,comp147351_c0_seq1.path1,comp150158_c0_seq1.path1,comp159001_c2_seq1.path1;transcripts=comp159001_c2_seq1.mrna1,comp150158_c0_seq1.mrna1,FBgn0034035.1.mrna1,FBgn0023441.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	628397	725147	.	+	.	ID=comp159001_c2_seq1.mrna1;geneID=comp159001_c2_seq1.path1;Name=comp159001_c2_seq1;Dir=antisensecoverage=94.5;identity=99.8;matches=8145;mismatches=10;indels=5;unknowns=0;locus=RLOC_00013975
Chr2	stalkie_big_nohaplotig	exon	628397	628402	100	+	.	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 8164 8169 -
Chr2	stalkie_big_nohaplotig	exon	635192	635197	100	+	.	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 8158 8163 -
Chr2	stalkie_big_nohaplotig	exon	640027	640029	100	+	.	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 8155 8157 -
Chr2	stalkie_big_nohaplotig	exon	661442	661445	100	+	.	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 8151 8154 -
Chr2	stalkie_big_nohaplotig	exon	665008	665014	100	+	.	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 8144 8150 -
Chr2	stalkie_big_nohaplotig	exon	671831	671840	90	+	.	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 8134 8143 -
Chr2	stalkie_big_nohaplotig	exon	675974	675992	56	+	.	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 8111 8133 -
Chr2	stalkie_big_nohaplotig	exon	677931	679241	99	+	.	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 6799 8110 -
Chr2	stalkie_big_nohaplotig	exon	693247	693572	100	+	.	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 6473 6798 -
Chr2	stalkie_big_nohaplotig	exon	707879	708244	100	+	.	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 6107 6472 -
Chr2	stalkie_big_nohaplotig	exon	714594	714873	100	+	.	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 5827 6106 -
Chr2	stalkie_big_nohaplotig	exon	714941	715030	100	+	.	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 5737 5826 -
Chr2	stalkie_big_nohaplotig	exon	715087	715141	100	+	.	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 5682 5736 -
Chr2	stalkie_big_nohaplotig	exon	718220	718330	100	+	.	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 5571 5681 -
Chr2	stalkie_big_nohaplotig	exon	719120	719390	100	+	.	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 5300 5570 -
Chr2	stalkie_big_nohaplotig	exon	719450	719764	100	+	.	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 4985 5299 -
Chr2	stalkie_big_nohaplotig	exon	720112	720258	100	+	.	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 4838 4984 -
Chr2	stalkie_big_nohaplotig	exon	720320	725147	99	+	.	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 10 4837 -
Chr2	stalkie_big_nohaplotig	CDS	693444	693572	.	+	0	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 6473 6601 .
Chr2	stalkie_big_nohaplotig	CDS	707879	708244	.	+	0	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 6107 6472 .
Chr2	stalkie_big_nohaplotig	CDS	714594	714873	.	+	0	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 5827 6106 .
Chr2	stalkie_big_nohaplotig	CDS	714941	715030	.	+	2	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 5737 5826 .
Chr2	stalkie_big_nohaplotig	CDS	715087	715141	.	+	2	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 5682 5736 .
Chr2	stalkie_big_nohaplotig	CDS	718220	718330	.	+	1	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 5571 5681 .
Chr2	stalkie_big_nohaplotig	CDS	719120	719390	.	+	1	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 5300 5570 .
Chr2	stalkie_big_nohaplotig	CDS	719450	719764	.	+	0	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 4985 5299 .
Chr2	stalkie_big_nohaplotig	CDS	720112	720258	.	+	0	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 4838 4984 .
Chr2	stalkie_big_nohaplotig	CDS	720320	721450	.	+	0	Parent=comp159001_c2_seq1.mrna1;Target=comp159001_c2_seq1 3707 4837 .
Chr2	stalkie_big_nohaplotig	mRNA	641755	677964	.	+	.	ID=comp150158_c0_seq1.mrna1;geneID=comp150158_c0_seq1.path1;Name=comp150158_c0_seq1;Dir=indeterminatecoverage=55.3;identity=100.0;matches=440;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013975
Chr2	stalkie_big_nohaplotig	exon	641755	641756	100	+	.	Parent=comp150158_c0_seq1.mrna1;Target=comp150158_c0_seq1 358 357 .
Chr2	stalkie_big_nohaplotig	exon	644820	644828	100	+	.	Parent=comp150158_c0_seq1.mrna1;Target=comp150158_c0_seq1 367 359 .
Chr2	stalkie_big_nohaplotig	exon	677536	677964	100	+	.	Parent=comp150158_c0_seq1.mrna1;Target=comp150158_c0_seq1 796 368 .
Chr2	stalkie_big_nohaplotig	CDS	641755	641756	.	+	0	Parent=comp150158_c0_seq1.mrna1;Target=comp150158_c0_seq1 358 357 .
Chr2	stalkie_big_nohaplotig	CDS	644820	644828	.	+	1	Parent=comp150158_c0_seq1.mrna1;Target=comp150158_c0_seq1 367 359 .
Chr2	stalkie_big_nohaplotig	CDS	677536	677674	.	+	1	Parent=comp150158_c0_seq1.mrna1;Target=comp150158_c0_seq1 506 368 .
Chr2	stalkie_big_nohaplotig	mRNA	670904	673079	.	+	.	ID=FBgn0034035.1.mrna1;geneID=FBgn0034035.1.path1;Name=FBgn0034035.1;Dir=sensecoverage=100.0;identity=100.0;matches=1317;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013975
Chr2	stalkie_big_nohaplotig	exon	670904	670955	100	+	.	Parent=FBgn0034035.1.mrna1;Target=FBgn0034035.1 1 52 +
Chr2	stalkie_big_nohaplotig	exon	671167	671365	100	+	.	Parent=FBgn0034035.1.mrna1;Target=FBgn0034035.1 53 251 +
Chr2	stalkie_big_nohaplotig	exon	671415	671980	100	+	.	Parent=FBgn0034035.1.mrna1;Target=FBgn0034035.1 252 817 +
Chr2	stalkie_big_nohaplotig	exon	672056	672192	100	+	.	Parent=FBgn0034035.1.mrna1;Target=FBgn0034035.1 818 954 +
Chr2	stalkie_big_nohaplotig	exon	672396	672516	100	+	.	Parent=FBgn0034035.1.mrna1;Target=FBgn0034035.1 955 1075 +
Chr2	stalkie_big_nohaplotig	exon	672579	672722	100	+	.	Parent=FBgn0034035.1.mrna1;Target=FBgn0034035.1 1076 1219 +
Chr2	stalkie_big_nohaplotig	exon	672982	673079	100	+	.	Parent=FBgn0034035.1.mrna1;Target=FBgn0034035.1 1220 1317 +
Chr2	stalkie_big_nohaplotig	CDS	670904	670955	.	+	0	Parent=FBgn0034035.1.mrna1;Target=FBgn0034035.1 1 52 +
Chr2	stalkie_big_nohaplotig	CDS	671167	671365	.	+	2	Parent=FBgn0034035.1.mrna1;Target=FBgn0034035.1 53 251 +
Chr2	stalkie_big_nohaplotig	CDS	671415	671980	.	+	1	Parent=FBgn0034035.1.mrna1;Target=FBgn0034035.1 252 817 +
Chr2	stalkie_big_nohaplotig	CDS	672056	672192	.	+	2	Parent=FBgn0034035.1.mrna1;Target=FBgn0034035.1 818 954 +
Chr2	stalkie_big_nohaplotig	CDS	672396	672516	.	+	0	Parent=FBgn0034035.1.mrna1;Target=FBgn0034035.1 955 1075 +
Chr2	stalkie_big_nohaplotig	CDS	672579	672722	.	+	2	Parent=FBgn0034035.1.mrna1;Target=FBgn0034035.1 1076 1219 +
Chr2	stalkie_big_nohaplotig	CDS	672982	673079	.	+	2	Parent=FBgn0034035.1.mrna1;Target=FBgn0034035.1 1220 1317 +
Chr2	stalkie_big_nohaplotig	mRNA	707879	728235	.	+	.	ID=FBgn0023441.1.mrna1;geneID=FBgn0023441.1.path1;Name=FBgn0023441.1;Dir=sensecoverage=92.3;identity=100.0;matches=2852;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013975
Chr2	stalkie_big_nohaplotig	exon	707879	708244	100	+	.	Parent=FBgn0023441.1.mrna1;Target=FBgn0023441.1 238 603 +
Chr2	stalkie_big_nohaplotig	exon	714594	714873	100	+	.	Parent=FBgn0023441.1.mrna1;Target=FBgn0023441.1 604 883 +
Chr2	stalkie_big_nohaplotig	exon	714941	715030	100	+	.	Parent=FBgn0023441.1.mrna1;Target=FBgn0023441.1 884 973 +
Chr2	stalkie_big_nohaplotig	exon	715087	715141	100	+	.	Parent=FBgn0023441.1.mrna1;Target=FBgn0023441.1 974 1028 +
Chr2	stalkie_big_nohaplotig	exon	718220	718330	100	+	.	Parent=FBgn0023441.1.mrna1;Target=FBgn0023441.1 1029 1139 +
Chr2	stalkie_big_nohaplotig	exon	719120	719390	100	+	.	Parent=FBgn0023441.1.mrna1;Target=FBgn0023441.1 1140 1410 +
Chr2	stalkie_big_nohaplotig	exon	719450	719764	100	+	.	Parent=FBgn0023441.1.mrna1;Target=FBgn0023441.1 1411 1725 +
Chr2	stalkie_big_nohaplotig	exon	720112	720258	100	+	.	Parent=FBgn0023441.1.mrna1;Target=FBgn0023441.1 1726 1872 +
Chr2	stalkie_big_nohaplotig	exon	720320	720557	100	+	.	Parent=FBgn0023441.1.mrna1;Target=FBgn0023441.1 1873 2110 +
Chr2	stalkie_big_nohaplotig	exon	726639	726865	100	+	.	Parent=FBgn0023441.1.mrna1;Target=FBgn0023441.1 2111 2337 +
Chr2	stalkie_big_nohaplotig	exon	727483	728235	99	+	.	Parent=FBgn0023441.1.mrna1;Target=FBgn0023441.1 2338 3090 +
Chr2	stalkie_big_nohaplotig	CDS	707879	708244	.	+	0	Parent=FBgn0023441.1.mrna1;Target=FBgn0023441.1 238 603 +
Chr2	stalkie_big_nohaplotig	CDS	714594	714873	.	+	0	Parent=FBgn0023441.1.mrna1;Target=FBgn0023441.1 604 883 +
Chr2	stalkie_big_nohaplotig	CDS	714941	715030	.	+	2	Parent=FBgn0023441.1.mrna1;Target=FBgn0023441.1 884 973 +
Chr2	stalkie_big_nohaplotig	CDS	715087	715141	.	+	2	Parent=FBgn0023441.1.mrna1;Target=FBgn0023441.1 974 1028 +
Chr2	stalkie_big_nohaplotig	CDS	718220	718330	.	+	1	Parent=FBgn0023441.1.mrna1;Target=FBgn0023441.1 1029 1139 +
Chr2	stalkie_big_nohaplotig	CDS	719120	719390	.	+	1	Parent=FBgn0023441.1.mrna1;Target=FBgn0023441.1 1140 1410 +
Chr2	stalkie_big_nohaplotig	CDS	719450	719764	.	+	0	Parent=FBgn0023441.1.mrna1;Target=FBgn0023441.1 1411 1725 +
Chr2	stalkie_big_nohaplotig	CDS	720112	720258	.	+	0	Parent=FBgn0023441.1.mrna1;Target=FBgn0023441.1 1726 1872 +
Chr2	stalkie_big_nohaplotig	CDS	720320	720557	.	+	0	Parent=FBgn0023441.1.mrna1;Target=FBgn0023441.1 1873 2110 +
Chr2	stalkie_big_nohaplotig	CDS	726639	726865	.	+	2	Parent=FBgn0023441.1.mrna1;Target=FBgn0023441.1 2111 2337 +
Chr2	stalkie_big_nohaplotig	CDS	727483	728235	.	+	0	Parent=FBgn0023441.1.mrna1;Target=FBgn0023441.1 2338 3090 +
Chr2	gffcl	locus	635449	637095	.	+	.	ID=RLOC_00013976;geneIDs=FBgn0034356.path1;transcripts=FBgn0034356.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	635449	637095	.	+	.	ID=FBgn0034356.mrna1;geneID=FBgn0034356.path1;Name=FBgn0034356;Dir=indeterminatecoverage=100.0;identity=99.1;matches=321;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013976
Chr2	stalkie_big_nohaplotig	exon	635449	636444	99	+	.	Parent=FBgn0034356.mrna1;Target=FBgn0034356 996 1 .
Chr2	stalkie_big_nohaplotig	exon	636772	637095	99	+	.	Parent=FBgn0034356.mrna1;Target=FBgn0034356 324 1 .
Chr2	stalkie_big_nohaplotig	CDS	635449	636444	.	+	0	Parent=FBgn0034356.mrna1;Target=FBgn0034356 996 1 .
Chr2	stalkie_big_nohaplotig	CDS	636772	637095	.	+	0	Parent=FBgn0034356.mrna1;Target=FBgn0034356 324 1 .
Chr2	gffcl	locus	642292	644445	.	.	.	ID=RLOC_00013977;geneIDs=FBgn0003067.1.path1,comp420086_c0_seq1.path1;transcripts=FBgn0003067.1.mrna1,comp420086_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	642292	644445	.	+	.	ID=FBgn0003067.1.mrna1;geneID=FBgn0003067.1.path1;Name=FBgn0003067.1;Dir=sensecoverage=100.0;identity=100.0;matches=1965;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013977
Chr2	stalkie_big_nohaplotig	exon	642292	642347	100	+	.	Parent=FBgn0003067.1.mrna1;Target=FBgn0003067.1 1 56 +
Chr2	stalkie_big_nohaplotig	exon	642537	644445	100	+	.	Parent=FBgn0003067.1.mrna1;Target=FBgn0003067.1 57 1965 +
Chr2	stalkie_big_nohaplotig	CDS	642292	642347	.	+	0	Parent=FBgn0003067.1.mrna1;Target=FBgn0003067.1 1 56 +
Chr2	stalkie_big_nohaplotig	CDS	642537	644445	.	+	1	Parent=FBgn0003067.1.mrna1;Target=FBgn0003067.1 57 1965 +
Chr2	stalkie_big_nohaplotig	mRNA	642325	642559	.	-	.	ID=comp420086_c0_seq1.mrna1;geneID=comp420086_c0_seq1.path1;Name=comp420086_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=235;mismatches=0;indels=0;unknowns=0;Target=comp420086_c0_seq1 235 1 .;CDS_Target=comp420086_c0_seq1 78 1 .;locus=RLOC_00013977
Chr2	stalkie_big_nohaplotig	exon	642325	642559	100	-	.	Parent=comp420086_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	642482	642559	.	-	0	Parent=comp420086_c0_seq1.mrna1
Chr2	gffcl	locus	650746	653974	.	+	.	ID=RLOC_00013978;geneIDs=FBgn0085419.1.path1;transcripts=FBgn0085419.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	650746	653974	.	+	.	ID=FBgn0085419.1.mrna1;geneID=FBgn0085419.1.path1;Name=FBgn0085419.1;Dir=sensecoverage=100.0;identity=100.0;matches=1362;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013978
Chr2	stalkie_big_nohaplotig	exon	650746	650802	100	+	.	Parent=FBgn0085419.1.mrna1;Target=FBgn0085419.1 1 57 +
Chr2	stalkie_big_nohaplotig	exon	651210	651564	100	+	.	Parent=FBgn0085419.1.mrna1;Target=FBgn0085419.1 58 412 +
Chr2	stalkie_big_nohaplotig	exon	651630	651813	100	+	.	Parent=FBgn0085419.1.mrna1;Target=FBgn0085419.1 413 596 +
Chr2	stalkie_big_nohaplotig	exon	651923	652039	100	+	.	Parent=FBgn0085419.1.mrna1;Target=FBgn0085419.1 597 713 +
Chr2	stalkie_big_nohaplotig	exon	652126	652226	100	+	.	Parent=FBgn0085419.1.mrna1;Target=FBgn0085419.1 714 814 +
Chr2	stalkie_big_nohaplotig	exon	652381	652478	100	+	.	Parent=FBgn0085419.1.mrna1;Target=FBgn0085419.1 815 912 +
Chr2	stalkie_big_nohaplotig	exon	652549	652741	100	+	.	Parent=FBgn0085419.1.mrna1;Target=FBgn0085419.1 913 1105 +
Chr2	stalkie_big_nohaplotig	exon	652968	653068	100	+	.	Parent=FBgn0085419.1.mrna1;Target=FBgn0085419.1 1106 1206 +
Chr2	stalkie_big_nohaplotig	exon	653819	653974	100	+	.	Parent=FBgn0085419.1.mrna1;Target=FBgn0085419.1 1207 1362 +
Chr2	stalkie_big_nohaplotig	CDS	650746	650802	.	+	0	Parent=FBgn0085419.1.mrna1;Target=FBgn0085419.1 1 57 +
Chr2	stalkie_big_nohaplotig	CDS	651210	651564	.	+	0	Parent=FBgn0085419.1.mrna1;Target=FBgn0085419.1 58 412 +
Chr2	stalkie_big_nohaplotig	CDS	651630	651813	.	+	2	Parent=FBgn0085419.1.mrna1;Target=FBgn0085419.1 413 596 +
Chr2	stalkie_big_nohaplotig	CDS	651923	652039	.	+	1	Parent=FBgn0085419.1.mrna1;Target=FBgn0085419.1 597 713 +
Chr2	stalkie_big_nohaplotig	CDS	652126	652226	.	+	1	Parent=FBgn0085419.1.mrna1;Target=FBgn0085419.1 714 814 +
Chr2	stalkie_big_nohaplotig	CDS	652381	652478	.	+	2	Parent=FBgn0085419.1.mrna1;Target=FBgn0085419.1 815 912 +
Chr2	stalkie_big_nohaplotig	CDS	652549	652741	.	+	0	Parent=FBgn0085419.1.mrna1;Target=FBgn0085419.1 913 1105 +
Chr2	stalkie_big_nohaplotig	CDS	652968	653068	.	+	2	Parent=FBgn0085419.1.mrna1;Target=FBgn0085419.1 1106 1206 +
Chr2	stalkie_big_nohaplotig	CDS	653819	653974	.	+	0	Parent=FBgn0085419.1.mrna1;Target=FBgn0085419.1 1207 1362 +
Chr2	gffcl	locus	654820	655088	.	-	.	ID=RLOC_00013979;geneIDs=comp118383_c0_seq1.path1;transcripts=comp118383_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	654820	655088	.	-	.	ID=comp118383_c0_seq1.mrna1;geneID=comp118383_c0_seq1.path1;Name=comp118383_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=268;mismatches=0;indels=1;unknowns=0;Target=comp118383_c0_seq1 268 1 .;CDS_Target=comp118383_c0_seq1 217 143 .;locus=RLOC_00013979
Chr2	stalkie_big_nohaplotig	exon	654820	655088	99	-	.	Parent=comp118383_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	654871	654946	.	-	0	Parent=comp118383_c0_seq1.mrna1
Chr2	gffcl	locus	655185	655719	.	-	.	ID=RLOC_00013980;geneIDs=comp57312_c0_seq1.path1;transcripts=comp57312_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	655185	655719	.	-	.	ID=comp57312_c0_seq1.mrna1;geneID=comp57312_c0_seq1.path1;Name=comp57312_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=534;mismatches=1;indels=0;unknowns=0;Target=comp57312_c0_seq1 535 1 .;CDS_Target=comp57312_c0_seq1 76 2 .;locus=RLOC_00013980
Chr2	stalkie_big_nohaplotig	exon	655185	655719	99	-	.	Parent=comp57312_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	655644	655718	.	-	0	Parent=comp57312_c0_seq1.mrna1
Chr2	gffcl	locus	656308	657030	.	+	.	ID=RLOC_00013981;geneIDs=comp113862_c0_seq1.path1;transcripts=comp113862_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	656308	657030	.	+	.	ID=comp113862_c0_seq1.mrna1;geneID=comp113862_c0_seq1.path1;Name=comp113862_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=722;mismatches=1;indels=0;unknowns=0;Target=comp113862_c0_seq1 723 1 .;CDS_Target=comp113862_c0_seq1 482 369 .;locus=RLOC_00013981
Chr2	stalkie_big_nohaplotig	exon	656308	657030	99	+	.	Parent=comp113862_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	656676	656789	.	+	0	Parent=comp113862_c0_seq1.mrna1
Chr2	gffcl	locus	662237	664132	.	-	.	ID=RLOC_00013982;geneIDs=FBgn0034037.1.path1;transcripts=FBgn0034037.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	662237	664132	.	-	.	ID=FBgn0034037.1.mrna1;geneID=FBgn0034037.1.path1;Name=FBgn0034037.1;Dir=sensecoverage=100.0;identity=100.0;matches=1644;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013982
Chr2	stalkie_big_nohaplotig	exon	662237	663601	100	-	.	Parent=FBgn0034037.1.mrna1;Target=FBgn0034037.1 280 1644 +
Chr2	stalkie_big_nohaplotig	exon	663854	664132	100	-	.	Parent=FBgn0034037.1.mrna1;Target=FBgn0034037.1 1 279 +
Chr2	stalkie_big_nohaplotig	CDS	662237	663601	.	-	0	Parent=FBgn0034037.1.mrna1;Target=FBgn0034037.1 280 1644 +
Chr2	stalkie_big_nohaplotig	CDS	663854	664132	.	-	0	Parent=FBgn0034037.1.mrna1;Target=FBgn0034037.1 1 279 +
Chr2	gffcl	locus	665007	668083	.	-	.	ID=RLOC_00013983;geneIDs=FBgn0053139.1.path1;transcripts=FBgn0053139.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	665007	668083	.	-	.	ID=FBgn0053139.1.mrna1;geneID=FBgn0053139.1.path1;Name=FBgn0053139.1;Dir=sensecoverage=100.0;identity=100.0;matches=3015;mismatches=0;indels=0;unknowns=0;locus=RLOC_00013983
Chr2	stalkie_big_nohaplotig	exon	665007	665999	100	-	.	Parent=FBgn0053139.1.mrna1;Target=FBgn0053139.1 2023 3015 +
Chr2	stalkie_big_nohaplotig	exon	666062	668083	100	-	.	Parent=FBgn0053139.1.mrna1;Target=FBgn0053139.1 1 2022 +
Chr2	stalkie_big_nohaplotig	CDS	665007	665999	.	-	0	Parent=FBgn0053139.1.mrna1;Target=FBgn0053139.1 2023 3015 +
Chr2	stalkie_big_nohaplotig	CDS	666062	668083	.	-	0	Parent=FBgn0053139.1.mrna1;Target=FBgn0053139.1 1 2022 +
Chr2	gffcl	locus	729715	730163	.	-	.	ID=RLOC_00013985;geneIDs=comp135669_c0_seq1.path1;transcripts=comp135669_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	729715	730163	.	-	.	ID=comp135669_c0_seq1.mrna1;geneID=comp135669_c0_seq1.path1;Name=comp135669_c0_seq1;Dir=indeterminatecoverage=72.5;identity=95.2;matches=441;mismatches=7;indels=15;unknowns=0;Target=comp135669_c0_seq1 635 174 .;CDS_Target=comp135669_c0_seq1 633 493 .;locus=RLOC_00013985
Chr2	stalkie_big_nohaplotig	exon	729715	730163	95	-	.	Parent=comp135669_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	729717	729857	.	-	0	Parent=comp135669_c0_seq1.mrna1
Chr2	gffcl	locus	738405	838233	.	-	.	ID=RLOC_00013986;geneIDs=comp156453_c0_seq1.path1;transcripts=comp156453_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	738405	838233	.	-	.	ID=comp156453_c0_seq1.mrna1;geneID=comp156453_c0_seq1.path1;Name=comp156453_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=2107;mismatches=5;indels=0;unknowns=0;Target=comp156453_c0_seq1 1799 2071 .;locus=RLOC_00013986
Chr2	stalkie_big_nohaplotig	exon	738405	738646	100	-	.	Parent=comp156453_c0_seq1.mrna1;Target=comp156453_c0_seq1 1 242 -
Chr2	stalkie_big_nohaplotig	exon	754588	754874	100	-	.	Parent=comp156453_c0_seq1.mrna1;Target=comp156453_c0_seq1 243 529 -
Chr2	stalkie_big_nohaplotig	exon	768847	768895	100	-	.	Parent=comp156453_c0_seq1.mrna1;Target=comp156453_c0_seq1 530 578 -
Chr2	stalkie_big_nohaplotig	exon	781846	782002	99	-	.	Parent=comp156453_c0_seq1.mrna1;Target=comp156453_c0_seq1 579 735 -
Chr2	stalkie_big_nohaplotig	exon	795679	795721	100	-	.	Parent=comp156453_c0_seq1.mrna1;Target=comp156453_c0_seq1 736 778 -
Chr2	stalkie_big_nohaplotig	exon	819176	819213	100	-	.	Parent=comp156453_c0_seq1.mrna1;Target=comp156453_c0_seq1 779 816 -
Chr2	stalkie_big_nohaplotig	exon	836938	838233	99	-	.	Parent=comp156453_c0_seq1.mrna1;Target=comp156453_c0_seq1 817 2112 -
Chr2	stalkie_big_nohaplotig	CDS	837920	838192	.	-	0	Parent=comp156453_c0_seq1.mrna1
Chr2	gffcl	locus	852158	852448	.	+	.	ID=RLOC_00013987;geneIDs=comp137524_c0_seq1.path1;transcripts=comp137524_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	852158	852448	.	+	.	ID=comp137524_c0_seq1.mrna1;geneID=comp137524_c0_seq1.path1;Name=comp137524_c0_seq1;Dir=indeterminatecoverage=99.7;identity=96.6;matches=281;mismatches=10;indels=0;unknowns=0;Target=comp137524_c0_seq1 291 1 .;CDS_Target=comp137524_c0_seq1 188 69 .;locus=RLOC_00013987
Chr2	stalkie_big_nohaplotig	exon	852158	852448	96	+	.	Parent=comp137524_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	852226	852345	.	+	0	Parent=comp137524_c0_seq1.mrna1
Chr2	gffcl	locus	944783	945386	.	+	.	ID=RLOC_00013988;geneIDs=FBgn0034033.1.path1;transcripts=FBgn0034033.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	944783	945386	.	+	.	ID=FBgn0034033.1.mrna1;geneID=FBgn0034033.1.path1;Name=FBgn0034033.1;Dir=sensecoverage=100.0;identity=99.3;matches=432;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013988
Chr2	stalkie_big_nohaplotig	exon	944783	944856	100	+	.	Parent=FBgn0034033.1.mrna1;Target=FBgn0034033.1 1 74 +
Chr2	stalkie_big_nohaplotig	exon	944923	945080	99	+	.	Parent=FBgn0034033.1.mrna1;Target=FBgn0034033.1 75 232 +
Chr2	stalkie_big_nohaplotig	exon	945184	945386	99	+	.	Parent=FBgn0034033.1.mrna1;Target=FBgn0034033.1 233 435 +
Chr2	stalkie_big_nohaplotig	CDS	944783	944856	.	+	0	Parent=FBgn0034033.1.mrna1;Target=FBgn0034033.1 1 74 +
Chr2	stalkie_big_nohaplotig	CDS	944923	945080	.	+	1	Parent=FBgn0034033.1.mrna1;Target=FBgn0034033.1 75 232 +
Chr2	stalkie_big_nohaplotig	CDS	945184	945386	.	+	2	Parent=FBgn0034033.1.mrna1;Target=FBgn0034033.1 233 435 +
Chr2	gffcl	locus	945523	948295	.	-	.	ID=RLOC_00013989;geneIDs=FBgn0034417.1.path1;transcripts=FBgn0034417.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	945523	948295	.	-	.	ID=FBgn0034417.1.mrna1;geneID=FBgn0034417.1.path1;Name=FBgn0034417.1;Dir=sensecoverage=100.0;identity=99.9;matches=2002;mismatches=2;indels=0;unknowns=0;locus=RLOC_00013989
Chr2	stalkie_big_nohaplotig	exon	945523	945719	100	-	.	Parent=FBgn0034417.1.mrna1;Target=FBgn0034417.1 1808 2004 +
Chr2	stalkie_big_nohaplotig	exon	945778	945916	100	-	.	Parent=FBgn0034417.1.mrna1;Target=FBgn0034417.1 1669 1807 +
Chr2	stalkie_big_nohaplotig	exon	945975	946151	99	-	.	Parent=FBgn0034417.1.mrna1;Target=FBgn0034417.1 1492 1668 +
Chr2	stalkie_big_nohaplotig	exon	946208	946292	100	-	.	Parent=FBgn0034417.1.mrna1;Target=FBgn0034417.1 1407 1491 +
Chr2	stalkie_big_nohaplotig	exon	946345	946488	100	-	.	Parent=FBgn0034417.1.mrna1;Target=FBgn0034417.1 1263 1406 +
Chr2	stalkie_big_nohaplotig	exon	946542	946714	100	-	.	Parent=FBgn0034417.1.mrna1;Target=FBgn0034417.1 1090 1262 +
Chr2	stalkie_big_nohaplotig	exon	946772	947145	100	-	.	Parent=FBgn0034417.1.mrna1;Target=FBgn0034417.1 716 1089 +
Chr2	stalkie_big_nohaplotig	exon	947388	947533	100	-	.	Parent=FBgn0034417.1.mrna1;Target=FBgn0034417.1 570 715 +
Chr2	stalkie_big_nohaplotig	exon	947598	947764	100	-	.	Parent=FBgn0034417.1.mrna1;Target=FBgn0034417.1 403 569 +
Chr2	stalkie_big_nohaplotig	exon	947836	948015	100	-	.	Parent=FBgn0034417.1.mrna1;Target=FBgn0034417.1 223 402 +
Chr2	stalkie_big_nohaplotig	exon	948074	948295	99	-	.	Parent=FBgn0034417.1.mrna1;Target=FBgn0034417.1 1 222 +
Chr2	stalkie_big_nohaplotig	CDS	945523	945719	.	-	2	Parent=FBgn0034417.1.mrna1;Target=FBgn0034417.1 1808 2004 +
Chr2	stalkie_big_nohaplotig	CDS	945778	945916	.	-	0	Parent=FBgn0034417.1.mrna1;Target=FBgn0034417.1 1669 1807 +
Chr2	stalkie_big_nohaplotig	CDS	945975	946151	.	-	0	Parent=FBgn0034417.1.mrna1;Target=FBgn0034417.1 1492 1668 +
Chr2	stalkie_big_nohaplotig	CDS	946208	946292	.	-	1	Parent=FBgn0034417.1.mrna1;Target=FBgn0034417.1 1407 1491 +
Chr2	stalkie_big_nohaplotig	CDS	946345	946488	.	-	1	Parent=FBgn0034417.1.mrna1;Target=FBgn0034417.1 1263 1406 +
Chr2	stalkie_big_nohaplotig	CDS	946542	946714	.	-	0	Parent=FBgn0034417.1.mrna1;Target=FBgn0034417.1 1090 1262 +
Chr2	stalkie_big_nohaplotig	CDS	946772	947145	.	-	2	Parent=FBgn0034417.1.mrna1;Target=FBgn0034417.1 716 1089 +
Chr2	stalkie_big_nohaplotig	CDS	947388	947533	.	-	1	Parent=FBgn0034417.1.mrna1;Target=FBgn0034417.1 570 715 +
Chr2	stalkie_big_nohaplotig	CDS	947598	947764	.	-	0	Parent=FBgn0034417.1.mrna1;Target=FBgn0034417.1 403 569 +
Chr2	stalkie_big_nohaplotig	CDS	947836	948015	.	-	0	Parent=FBgn0034417.1.mrna1;Target=FBgn0034417.1 223 402 +
Chr2	stalkie_big_nohaplotig	CDS	948074	948295	.	-	0	Parent=FBgn0034417.1.mrna1;Target=FBgn0034417.1 1 222 +
Chr2	gffcl	locus	950715	953603	.	-	.	ID=RLOC_00013990;geneIDs=FBgn0034417.2.path1;transcripts=FBgn0034417.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	950715	953603	.	-	.	ID=FBgn0034417.2.mrna1;geneID=FBgn0034417.2.path1;Name=FBgn0034417.2;Dir=sensecoverage=99.7;identity=99.6;matches=1992;mismatches=8;indels=0;unknowns=0;locus=RLOC_00013990
Chr2	stalkie_big_nohaplotig	exon	950715	950911	100	-	.	Parent=FBgn0034417.2.mrna1;Target=FBgn0034417.2 1811 2007 +
Chr2	stalkie_big_nohaplotig	exon	950972	951110	100	-	.	Parent=FBgn0034417.2.mrna1;Target=FBgn0034417.2 1672 1810 +
Chr2	stalkie_big_nohaplotig	exon	951174	951350	98	-	.	Parent=FBgn0034417.2.mrna1;Target=FBgn0034417.2 1495 1671 +
Chr2	stalkie_big_nohaplotig	exon	951421	951505	100	-	.	Parent=FBgn0034417.2.mrna1;Target=FBgn0034417.2 1410 1494 +
Chr2	stalkie_big_nohaplotig	exon	951559	951702	99	-	.	Parent=FBgn0034417.2.mrna1;Target=FBgn0034417.2 1266 1409 +
Chr2	stalkie_big_nohaplotig	exon	952074	952246	100	-	.	Parent=FBgn0034417.2.mrna1;Target=FBgn0034417.2 1093 1265 +
Chr2	stalkie_big_nohaplotig	exon	952308	952672	100	-	.	Parent=FBgn0034417.2.mrna1;Target=FBgn0034417.2 728 1092 +
Chr2	stalkie_big_nohaplotig	exon	952740	952885	100	-	.	Parent=FBgn0034417.2.mrna1;Target=FBgn0034417.2 582 727 +
Chr2	stalkie_big_nohaplotig	exon	952966	953132	98	-	.	Parent=FBgn0034417.2.mrna1;Target=FBgn0034417.2 415 581 +
Chr2	stalkie_big_nohaplotig	exon	953197	953603	99	-	.	Parent=FBgn0034417.2.mrna1;Target=FBgn0034417.2 8 414 +
Chr2	stalkie_big_nohaplotig	CDS	950715	950911	.	-	2	Parent=FBgn0034417.2.mrna1;Target=FBgn0034417.2 1811 2007 +
Chr2	stalkie_big_nohaplotig	CDS	950972	951110	.	-	0	Parent=FBgn0034417.2.mrna1;Target=FBgn0034417.2 1672 1810 +
Chr2	stalkie_big_nohaplotig	CDS	951174	951350	.	-	0	Parent=FBgn0034417.2.mrna1;Target=FBgn0034417.2 1495 1671 +
Chr2	stalkie_big_nohaplotig	CDS	951421	951505	.	-	1	Parent=FBgn0034417.2.mrna1;Target=FBgn0034417.2 1410 1494 +
Chr2	stalkie_big_nohaplotig	CDS	951559	951702	.	-	1	Parent=FBgn0034417.2.mrna1;Target=FBgn0034417.2 1266 1409 +
Chr2	stalkie_big_nohaplotig	CDS	952074	952246	.	-	0	Parent=FBgn0034417.2.mrna1;Target=FBgn0034417.2 1093 1265 +
Chr2	stalkie_big_nohaplotig	CDS	952308	952672	.	-	2	Parent=FBgn0034417.2.mrna1;Target=FBgn0034417.2 728 1092 +
Chr2	stalkie_big_nohaplotig	CDS	952740	952885	.	-	1	Parent=FBgn0034417.2.mrna1;Target=FBgn0034417.2 582 727 +
Chr2	stalkie_big_nohaplotig	CDS	952966	953132	.	-	0	Parent=FBgn0034417.2.mrna1;Target=FBgn0034417.2 415 581 +
Chr2	stalkie_big_nohaplotig	CDS	953197	953601	.	-	0	Parent=FBgn0034417.2.mrna1;Target=FBgn0034417.2 10 414 +
Chr2	gffcl	locus	997567	999454	.	-	.	ID=RLOC_00013991;geneIDs=comp150508_c1_seq1.path1;transcripts=comp150508_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	997567	999454	.	-	.	ID=comp150508_c1_seq1.mrna1;geneID=comp150508_c1_seq1.path1;Name=comp150508_c1_seq1;Dir=indeterminatecoverage=99.9;identity=94.3;matches=1810;mismatches=28;indels=81;unknowns=0;Target=comp150508_c1_seq1 1651 1493 .;locus=RLOC_00013991
Chr2	stalkie_big_nohaplotig	exon	997567	999205	93	-	.	Parent=comp150508_c1_seq1.mrna1;Target=comp150508_c1_seq1 1919 200 .
Chr2	stalkie_big_nohaplotig	exon	999256	999454	98	-	.	Parent=comp150508_c1_seq1.mrna1;Target=comp150508_c1_seq1 199 1 .
Chr2	stalkie_big_nohaplotig	CDS	997762	997920	.	-	0	Parent=comp150508_c1_seq1.mrna1
Chr2	gffcl	locus	1024475	1039306	.	-	.	ID=RLOC_00013992;geneIDs=comp154322_c0_seq1.path1;transcripts=comp154322_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1024475	1039306	.	-	.	ID=comp154322_c0_seq1.mrna1;geneID=comp154322_c0_seq1.path1;Name=comp154322_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=1038;mismatches=3;indels=2;unknowns=0;Target=comp154322_c0_seq1 176 331 +;locus=RLOC_00013992
Chr2	stalkie_big_nohaplotig	exon	1024475	1024881	99	-	.	Parent=comp154322_c0_seq1.mrna1;Target=comp154322_c0_seq1 637 1043 +
Chr2	stalkie_big_nohaplotig	exon	1038621	1039178	99	-	.	Parent=comp154322_c0_seq1.mrna1;Target=comp154322_c0_seq1 77 636 +
Chr2	stalkie_big_nohaplotig	exon	1039231	1039306	100	-	.	Parent=comp154322_c0_seq1.mrna1;Target=comp154322_c0_seq1 1 76 +
Chr2	stalkie_big_nohaplotig	CDS	1038924	1039079	.	-	0	Parent=comp154322_c0_seq1.mrna1
Chr2	gffcl	locus	1044320	1044771	.	-	.	ID=RLOC_00013993;geneIDs=comp140105_c1_seq1.path1;transcripts=comp140105_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1044320	1044771	.	-	.	ID=comp140105_c1_seq1.mrna1;geneID=comp140105_c1_seq1.path1;Name=comp140105_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=447;mismatches=5;indels=0;unknowns=0;Target=comp140105_c1_seq1 452 1 .;CDS_Target=comp140105_c1_seq1 410 294 .;locus=RLOC_00013993
Chr2	stalkie_big_nohaplotig	exon	1044320	1044771	98	-	.	Parent=comp140105_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	1044362	1044478	.	-	0	Parent=comp140105_c1_seq1.mrna1
Chr2	gffcl	locus	1073145	1269991	.	+	.	ID=RLOC_00013994;geneIDs=FBgn0033438.1.path1;transcripts=FBgn0033438.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1073145	1269991	.	+	.	ID=FBgn0033438.1.mrna1;geneID=FBgn0033438.1.path1;Name=FBgn0033438.1;Dir=sensecoverage=91.4;identity=99.9;matches=1853;mismatches=1;indels=0;unknowns=0;locus=RLOC_00013994
Chr2	stalkie_big_nohaplotig	exon	1073145	1073246	100	+	.	Parent=FBgn0033438.1.mrna1;Target=FBgn0033438.1 175 276 +
Chr2	stalkie_big_nohaplotig	exon	1073465	1073655	100	+	.	Parent=FBgn0033438.1.mrna1;Target=FBgn0033438.1 277 467 +
Chr2	stalkie_big_nohaplotig	exon	1260118	1260258	100	+	.	Parent=FBgn0033438.1.mrna1;Target=FBgn0033438.1 468 608 +
Chr2	stalkie_big_nohaplotig	exon	1262011	1262153	100	+	.	Parent=FBgn0033438.1.mrna1;Target=FBgn0033438.1 609 751 +
Chr2	stalkie_big_nohaplotig	exon	1268515	1269077	99	+	.	Parent=FBgn0033438.1.mrna1;Target=FBgn0033438.1 752 1314 +
Chr2	stalkie_big_nohaplotig	exon	1269221	1269362	100	+	.	Parent=FBgn0033438.1.mrna1;Target=FBgn0033438.1 1315 1456 +
Chr2	stalkie_big_nohaplotig	exon	1269420	1269991	100	+	.	Parent=FBgn0033438.1.mrna1;Target=FBgn0033438.1 1457 2028 +
Chr2	stalkie_big_nohaplotig	CDS	1073145	1073246	.	+	0	Parent=FBgn0033438.1.mrna1;Target=FBgn0033438.1 175 276 +
Chr2	stalkie_big_nohaplotig	CDS	1073465	1073655	.	+	0	Parent=FBgn0033438.1.mrna1;Target=FBgn0033438.1 277 467 +
Chr2	stalkie_big_nohaplotig	CDS	1260118	1260258	.	+	1	Parent=FBgn0033438.1.mrna1;Target=FBgn0033438.1 468 608 +
Chr2	stalkie_big_nohaplotig	CDS	1262011	1262153	.	+	1	Parent=FBgn0033438.1.mrna1;Target=FBgn0033438.1 609 751 +
Chr2	stalkie_big_nohaplotig	CDS	1268515	1269077	.	+	2	Parent=FBgn0033438.1.mrna1;Target=FBgn0033438.1 752 1314 +
Chr2	stalkie_big_nohaplotig	CDS	1269221	1269362	.	+	0	Parent=FBgn0033438.1.mrna1;Target=FBgn0033438.1 1315 1456 +
Chr2	stalkie_big_nohaplotig	CDS	1269420	1269991	.	+	2	Parent=FBgn0033438.1.mrna1;Target=FBgn0033438.1 1457 2028 +
Chr2	gffcl	locus	1089724	1326555	.	+	.	ID=RLOC_00013995;geneIDs=comp143469_c0_seq1.path1;transcripts=comp143469_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1089724	1326555	.	+	.	ID=comp143469_c0_seq1.mrna1;geneID=comp143469_c0_seq1.path1;Name=comp143469_c0_seq1;Dir=indeterminatecoverage=94.0;identity=98.2;matches=777;mismatches=12;indels=2;unknowns=0;Target=comp143469_c0_seq1 180 1 .;locus=RLOC_00013995
Chr2	stalkie_big_nohaplotig	exon	1089724	1090310	99	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 589 1 .
Chr2	stalkie_big_nohaplotig	exon	1092026	1092032	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 596 590 .
Chr2	stalkie_big_nohaplotig	exon	1095814	1095821	75	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 604 597 .
Chr2	stalkie_big_nohaplotig	exon	1105079	1105082	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 608 605 .
Chr2	stalkie_big_nohaplotig	exon	1123421	1123424	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 618 615 .
Chr2	stalkie_big_nohaplotig	exon	1123627	1123638	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 630 619 .
Chr2	stalkie_big_nohaplotig	exon	1129809	1129818	90	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 724 715 .
Chr2	stalkie_big_nohaplotig	exon	1132822	1132833	75	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 736 725 .
Chr2	stalkie_big_nohaplotig	exon	1149140	1149147	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 744 737 .
Chr2	stalkie_big_nohaplotig	exon	1155770	1155777	87	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 752 745 .
Chr2	stalkie_big_nohaplotig	exon	1156860	1156864	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 757 753 .
Chr2	stalkie_big_nohaplotig	exon	1157445	1157447	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 760 758 .
Chr2	stalkie_big_nohaplotig	exon	1161914	1161919	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 766 761 .
Chr2	stalkie_big_nohaplotig	exon	1165953	1165963	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 777 767 .
Chr2	stalkie_big_nohaplotig	exon	1174695	1174697	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 780 778 .
Chr2	stalkie_big_nohaplotig	exon	1181572	1181576	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 785 781 .
Chr2	stalkie_big_nohaplotig	exon	1183313	1183316	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 789 786 .
Chr2	stalkie_big_nohaplotig	exon	1193988	1193992	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 794 790 .
Chr2	stalkie_big_nohaplotig	exon	1200587	1200588	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 796 795 .
Chr2	stalkie_big_nohaplotig	exon	1204480	1204484	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 801 797 .
Chr2	stalkie_big_nohaplotig	exon	1220290	1220297	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 809 802 .
Chr2	stalkie_big_nohaplotig	exon	1234273	1234280	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 817 810 .
Chr2	stalkie_big_nohaplotig	exon	1262961	1262969	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 826 818 .
Chr2	stalkie_big_nohaplotig	exon	1264987	1264989	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 829 827 .
Chr2	stalkie_big_nohaplotig	exon	1278952	1278955	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 833 830 .
Chr2	stalkie_big_nohaplotig	exon	1280740	1280746	57	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 840 834 .
Chr2	stalkie_big_nohaplotig	exon	1282037	1282038	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 842 841 .
Chr2	stalkie_big_nohaplotig	exon	1288355	1288358	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 846 843 .
Chr2	stalkie_big_nohaplotig	exon	1294165	1294166	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 848 847 .
Chr2	stalkie_big_nohaplotig	exon	1300068	1300075	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 856 849 .
Chr2	stalkie_big_nohaplotig	exon	1316063	1316071	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 865 857 .
Chr2	stalkie_big_nohaplotig	exon	1322807	1322814	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 873 866 .
Chr2	stalkie_big_nohaplotig	exon	1326550	1326555	100	+	.	Parent=comp143469_c0_seq1.mrna1;Target=comp143469_c0_seq1 893 888 .
Chr2	stalkie_big_nohaplotig	CDS	1089724	1089903	.	+	0	Parent=comp143469_c0_seq1.mrna1
Chr2	gffcl	locus	1092364	1272847	.	+	.	ID=RLOC_00013996;geneIDs=comp149055_c0_seq1.path1;transcripts=comp149055_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1092364	1272847	.	+	.	ID=comp149055_c0_seq1.mrna1;geneID=comp149055_c0_seq1.path1;Name=comp149055_c0_seq1;Dir=indeterminatecoverage=96.5;identity=97.3;matches=2215;mismatches=17;indels=44;unknowns=0;locus=RLOC_00013996
Chr2	stalkie_big_nohaplotig	exon	1092364	1092369	83	+	.	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 88 83 .
Chr2	stalkie_big_nohaplotig	exon	1099426	1099428	100	+	.	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 91 89 .
Chr2	stalkie_big_nohaplotig	exon	1103543	1103546	100	+	.	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 95 92 .
Chr2	stalkie_big_nohaplotig	exon	1111585	1111589	100	+	.	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 100 96 .
Chr2	stalkie_big_nohaplotig	exon	1125434	1125435	100	+	.	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 102 101 .
Chr2	stalkie_big_nohaplotig	exon	1131631	1131636	100	+	.	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 108 103 .
Chr2	stalkie_big_nohaplotig	exon	1135937	1135942	83	+	.	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 114 109 .
Chr2	stalkie_big_nohaplotig	exon	1141016	1141049	67	+	.	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 142 115 .
Chr2	stalkie_big_nohaplotig	exon	1157918	1157920	100	+	.	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 145 143 .
Chr2	stalkie_big_nohaplotig	exon	1158125	1158132	75	+	.	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 153 146 .
Chr2	stalkie_big_nohaplotig	exon	1170393	1170396	100	+	.	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 157 154 .
Chr2	stalkie_big_nohaplotig	exon	1182916	1182930	86	+	.	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 171 158 .
Chr2	stalkie_big_nohaplotig	exon	1185167	1185182	81	+	.	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 187 172 .
Chr2	stalkie_big_nohaplotig	exon	1188555	1188564	100	+	.	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 197 188 .
Chr2	stalkie_big_nohaplotig	exon	1197216	1197220	100	+	.	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 202 198 .
Chr2	stalkie_big_nohaplotig	exon	1198337	1198339	100	+	.	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 205 203 .
Chr2	stalkie_big_nohaplotig	exon	1203948	1203949	100	+	.	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 207 206 .
Chr2	stalkie_big_nohaplotig	exon	1217116	1217120	100	+	.	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 212 208 .
Chr2	stalkie_big_nohaplotig	exon	1237916	1237927	100	+	.	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 224 213 .
Chr2	stalkie_big_nohaplotig	exon	1243916	1243929	100	+	.	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 238 225 .
Chr2	stalkie_big_nohaplotig	exon	1270772	1272847	98	+	.	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 2351 239 .
Chr2	stalkie_big_nohaplotig	CDS	1092365	1092369	.	+	0	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 88 84 .
Chr2	stalkie_big_nohaplotig	CDS	1099426	1099428	.	+	1	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 91 89 .
Chr2	stalkie_big_nohaplotig	CDS	1103543	1103546	.	+	1	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 95 92 .
Chr2	stalkie_big_nohaplotig	CDS	1111585	1111589	.	+	0	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 100 96 .
Chr2	stalkie_big_nohaplotig	CDS	1125434	1125435	.	+	1	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 102 101 .
Chr2	stalkie_big_nohaplotig	CDS	1131631	1131636	.	+	2	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 108 103 .
Chr2	stalkie_big_nohaplotig	CDS	1135937	1135942	.	+	2	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 114 109 .
Chr2	stalkie_big_nohaplotig	CDS	1141016	1141049	.	+	2	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 142 115 .
Chr2	stalkie_big_nohaplotig	CDS	1157918	1157920	.	+	1	Parent=comp149055_c0_seq1.mrna1;Target=comp149055_c0_seq1 145 143 .
Chr2	gffcl	locus	1119303	1144873	.	-	.	ID=RLOC_00013997;geneIDs=comp160958_c3_seq1.path1;transcripts=comp160958_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1119303	1144873	.	-	.	ID=comp160958_c3_seq1.mrna1;geneID=comp160958_c3_seq1.path1;Name=comp160958_c3_seq1;Dir=sensecoverage=51.7;identity=98.7;matches=2067;mismatches=5;indels=22;unknowns=0;Target=comp160958_c3_seq1 2031 2195 +;locus=RLOC_00013997
Chr2	stalkie_big_nohaplotig	exon	1119303	1121314	98	-	.	Parent=comp160958_c3_seq1.mrna1;Target=comp160958_c3_seq1 327 2318 +
Chr2	stalkie_big_nohaplotig	exon	1122721	1122728	100	-	.	Parent=comp160958_c3_seq1.mrna1;Target=comp160958_c3_seq1 317 324 +
Chr2	stalkie_big_nohaplotig	exon	1123205	1123213	100	-	.	Parent=comp160958_c3_seq1.mrna1;Target=comp160958_c3_seq1 294 302 +
Chr2	stalkie_big_nohaplotig	exon	1127069	1127071	100	-	.	Parent=comp160958_c3_seq1.mrna1;Target=comp160958_c3_seq1 291 293 +
Chr2	stalkie_big_nohaplotig	exon	1127228	1127235	87	-	.	Parent=comp160958_c3_seq1.mrna1;Target=comp160958_c3_seq1 283 290 +
Chr2	stalkie_big_nohaplotig	exon	1127683	1127694	83	-	.	Parent=comp160958_c3_seq1.mrna1;Target=comp160958_c3_seq1 271 282 +
Chr2	stalkie_big_nohaplotig	exon	1128085	1128092	100	-	.	Parent=comp160958_c3_seq1.mrna1;Target=comp160958_c3_seq1 199 206 +
Chr2	stalkie_big_nohaplotig	exon	1134107	1134111	100	-	.	Parent=comp160958_c3_seq1.mrna1;Target=comp160958_c3_seq1 194 198 +
Chr2	stalkie_big_nohaplotig	exon	1136452	1136460	77	-	.	Parent=comp160958_c3_seq1.mrna1;Target=comp160958_c3_seq1 185 193 +
Chr2	stalkie_big_nohaplotig	exon	1137003	1137007	100	-	.	Parent=comp160958_c3_seq1.mrna1;Target=comp160958_c3_seq1 180 184 +
Chr2	stalkie_big_nohaplotig	exon	1138865	1138868	100	-	.	Parent=comp160958_c3_seq1.mrna1;Target=comp160958_c3_seq1 176 179 +
Chr2	stalkie_big_nohaplotig	exon	1140340	1140341	100	-	.	Parent=comp160958_c3_seq1.mrna1;Target=comp160958_c3_seq1 174 175 +
Chr2	stalkie_big_nohaplotig	exon	1144868	1144873	100	-	.	Parent=comp160958_c3_seq1.mrna1;Target=comp160958_c3_seq1 168 173 +
Chr2	stalkie_big_nohaplotig	CDS	1119426	1119590	.	-	0	Parent=comp160958_c3_seq1.mrna1
Chr2	gffcl	locus	1273435	1282558	.	-	.	ID=RLOC_00013998;geneIDs=FBgn0023143.1.path1;transcripts=FBgn0023143.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1273435	1282558	.	-	.	ID=FBgn0023143.1.mrna1;geneID=FBgn0023143.1.path1;Name=FBgn0023143.1;Dir=sensecoverage=100.0;identity=99.9;matches=3474;mismatches=3;indels=0;unknowns=0;locus=RLOC_00013998
Chr2	stalkie_big_nohaplotig	exon	1273435	1273849	100	-	.	Parent=FBgn0023143.1.mrna1;Target=FBgn0023143.1 3063 3477 +
Chr2	stalkie_big_nohaplotig	exon	1274639	1275009	99	-	.	Parent=FBgn0023143.1.mrna1;Target=FBgn0023143.1 2692 3062 +
Chr2	stalkie_big_nohaplotig	exon	1275076	1275384	100	-	.	Parent=FBgn0023143.1.mrna1;Target=FBgn0023143.1 2383 2691 +
Chr2	stalkie_big_nohaplotig	exon	1275454	1276117	99	-	.	Parent=FBgn0023143.1.mrna1;Target=FBgn0023143.1 1719 2382 +
Chr2	stalkie_big_nohaplotig	exon	1276180	1277231	99	-	.	Parent=FBgn0023143.1.mrna1;Target=FBgn0023143.1 667 1718 +
Chr2	stalkie_big_nohaplotig	exon	1281893	1282558	100	-	.	Parent=FBgn0023143.1.mrna1;Target=FBgn0023143.1 1 666 +
Chr2	stalkie_big_nohaplotig	CDS	1273435	1273849	.	-	1	Parent=FBgn0023143.1.mrna1;Target=FBgn0023143.1 3063 3477 +
Chr2	stalkie_big_nohaplotig	CDS	1274639	1275009	.	-	0	Parent=FBgn0023143.1.mrna1;Target=FBgn0023143.1 2692 3062 +
Chr2	stalkie_big_nohaplotig	CDS	1275076	1275384	.	-	0	Parent=FBgn0023143.1.mrna1;Target=FBgn0023143.1 2383 2691 +
Chr2	stalkie_big_nohaplotig	CDS	1275454	1276117	.	-	1	Parent=FBgn0023143.1.mrna1;Target=FBgn0023143.1 1719 2382 +
Chr2	stalkie_big_nohaplotig	CDS	1276180	1277231	.	-	0	Parent=FBgn0023143.1.mrna1;Target=FBgn0023143.1 667 1718 +
Chr2	stalkie_big_nohaplotig	CDS	1281893	1282558	.	-	0	Parent=FBgn0023143.1.mrna1;Target=FBgn0023143.1 1 666 +
Chr2	gffcl	locus	1284163	1291745	.	-	.	ID=RLOC_00013999;geneIDs=FBgn0263076.1.path1;transcripts=FBgn0263076.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1284163	1291745	.	-	.	ID=FBgn0263076.1.mrna1;geneID=FBgn0263076.1.path1;Name=FBgn0263076.1;Dir=sensecoverage=100.0;identity=99.8;matches=1847;mismatches=4;indels=0;unknowns=0;locus=RLOC_00013999
Chr2	stalkie_big_nohaplotig	exon	1284163	1284360	99	-	.	Parent=FBgn0263076.1.mrna1;Target=FBgn0263076.1 1654 1851 +
Chr2	stalkie_big_nohaplotig	exon	1284426	1284540	100	-	.	Parent=FBgn0263076.1.mrna1;Target=FBgn0263076.1 1539 1653 +
Chr2	stalkie_big_nohaplotig	exon	1285608	1286214	99	-	.	Parent=FBgn0263076.1.mrna1;Target=FBgn0263076.1 932 1538 +
Chr2	stalkie_big_nohaplotig	exon	1286315	1286551	100	-	.	Parent=FBgn0263076.1.mrna1;Target=FBgn0263076.1 695 931 +
Chr2	stalkie_big_nohaplotig	exon	1289136	1289277	99	-	.	Parent=FBgn0263076.1.mrna1;Target=FBgn0263076.1 553 694 +
Chr2	stalkie_big_nohaplotig	exon	1291072	1291212	99	-	.	Parent=FBgn0263076.1.mrna1;Target=FBgn0263076.1 412 552 +
Chr2	stalkie_big_nohaplotig	exon	1291274	1291501	100	-	.	Parent=FBgn0263076.1.mrna1;Target=FBgn0263076.1 184 411 +
Chr2	stalkie_big_nohaplotig	exon	1291563	1291745	100	-	.	Parent=FBgn0263076.1.mrna1;Target=FBgn0263076.1 1 183 +
Chr2	stalkie_big_nohaplotig	CDS	1284163	1284360	.	-	0	Parent=FBgn0263076.1.mrna1;Target=FBgn0263076.1 1654 1851 +
Chr2	stalkie_big_nohaplotig	CDS	1284426	1284540	.	-	1	Parent=FBgn0263076.1.mrna1;Target=FBgn0263076.1 1539 1653 +
Chr2	stalkie_big_nohaplotig	CDS	1285608	1286214	.	-	2	Parent=FBgn0263076.1.mrna1;Target=FBgn0263076.1 932 1538 +
Chr2	stalkie_big_nohaplotig	CDS	1286315	1286551	.	-	2	Parent=FBgn0263076.1.mrna1;Target=FBgn0263076.1 695 931 +
Chr2	stalkie_big_nohaplotig	CDS	1289136	1289277	.	-	0	Parent=FBgn0263076.1.mrna1;Target=FBgn0263076.1 553 694 +
Chr2	stalkie_big_nohaplotig	CDS	1291072	1291212	.	-	0	Parent=FBgn0263076.1.mrna1;Target=FBgn0263076.1 412 552 +
Chr2	stalkie_big_nohaplotig	CDS	1291274	1291501	.	-	0	Parent=FBgn0263076.1.mrna1;Target=FBgn0263076.1 184 411 +
Chr2	stalkie_big_nohaplotig	CDS	1291563	1291745	.	-	0	Parent=FBgn0263076.1.mrna1;Target=FBgn0263076.1 1 183 +
Chr2	gffcl	locus	1320328	2079388	.	.	.	ID=RLOC_00014001;geneIDs=FBgn0010434.1.path1,comp45938_c0_seq1.path1,comp105679_c0_seq1.path1,comp152456_c0_seq1.path1;transcripts=comp152456_c0_seq1.mrna1,FBgn0010434.1.mrna1,comp105679_c0_seq1.mrna1,comp45938_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1320328	2075114	.	+	.	ID=comp152456_c0_seq1.mrna1;geneID=comp152456_c0_seq1.path1;Name=comp152456_c0_seq1;Dir=indeterminatecoverage=77.6;identity=96.9;matches=679;mismatches=8;indels=14;unknowns=0;Target=comp152456_c0_seq1 86 3 .;locus=RLOC_00014001
Chr2	stalkie_big_nohaplotig	exon	1320328	1320497	99	+	.	Parent=comp152456_c0_seq1.mrna1;Target=comp152456_c0_seq1 170 1 .
Chr2	stalkie_big_nohaplotig	exon	1320570	1321038	97	+	.	Parent=comp152456_c0_seq1.mrna1;Target=comp152456_c0_seq1 644 171 .
Chr2	stalkie_big_nohaplotig	exon	2026377	2026396	55	+	.	Parent=comp152456_c0_seq1.mrna1;Target=comp152456_c0_seq1 655 645 .
Chr2	stalkie_big_nohaplotig	exon	2027821	2027823	100	+	.	Parent=comp152456_c0_seq1.mrna1;Target=comp152456_c0_seq1 658 656 .
Chr2	stalkie_big_nohaplotig	exon	2051439	2051446	100	+	.	Parent=comp152456_c0_seq1.mrna1;Target=comp152456_c0_seq1 666 659 .
Chr2	stalkie_big_nohaplotig	exon	2058444	2058447	100	+	.	Parent=comp152456_c0_seq1.mrna1;Target=comp152456_c0_seq1 670 667 .
Chr2	stalkie_big_nohaplotig	exon	2065887	2065892	100	+	.	Parent=comp152456_c0_seq1.mrna1;Target=comp152456_c0_seq1 676 671 .
Chr2	stalkie_big_nohaplotig	exon	2071153	2071155	100	+	.	Parent=comp152456_c0_seq1.mrna1;Target=comp152456_c0_seq1 679 677 .
Chr2	stalkie_big_nohaplotig	exon	2072024	2072030	100	+	.	Parent=comp152456_c0_seq1.mrna1;Target=comp152456_c0_seq1 686 680 .
Chr2	stalkie_big_nohaplotig	exon	2072827	2072830	100	+	.	Parent=comp152456_c0_seq1.mrna1;Target=comp152456_c0_seq1 690 687 .
Chr2	stalkie_big_nohaplotig	exon	2075113	2075114	100	+	.	Parent=comp152456_c0_seq1.mrna1;Target=comp152456_c0_seq1 692 691 .
Chr2	stalkie_big_nohaplotig	CDS	1320330	1320413	.	+	0	Parent=comp152456_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2068074	2079388	.	+	.	ID=FBgn0010434.1.mrna1;geneID=FBgn0010434.1.path1;Name=FBgn0010434.1;Dir=sensecoverage=100.0;identity=99.8;matches=5155;mismatches=4;indels=4;unknowns=0;Target=FBgn0010434.1 39 158 +;locus=RLOC_00014001
Chr2	stalkie_big_nohaplotig	exon	2068074	2068258	98	+	.	Parent=FBgn0010434.1.mrna1;Target=FBgn0010434.1 1 186 +
Chr2	stalkie_big_nohaplotig	exon	2068325	2068770	100	+	.	Parent=FBgn0010434.1.mrna1;Target=FBgn0010434.1 187 632 +
Chr2	stalkie_big_nohaplotig	exon	2068837	2068989	99	+	.	Parent=FBgn0010434.1.mrna1;Target=FBgn0010434.1 633 785 +
Chr2	stalkie_big_nohaplotig	exon	2069756	2070114	100	+	.	Parent=FBgn0010434.1.mrna1;Target=FBgn0010434.1 786 1144 +
Chr2	stalkie_big_nohaplotig	exon	2070179	2070306	100	+	.	Parent=FBgn0010434.1.mrna1;Target=FBgn0010434.1 1145 1272 +
Chr2	stalkie_big_nohaplotig	exon	2072566	2072749	97	+	.	Parent=FBgn0010434.1.mrna1;Target=FBgn0010434.1 1273 1453 +
Chr2	stalkie_big_nohaplotig	exon	2072926	2072978	100	+	.	Parent=FBgn0010434.1.mrna1;Target=FBgn0010434.1 1454 1506 +
Chr2	stalkie_big_nohaplotig	exon	2073400	2076381	100	+	.	Parent=FBgn0010434.1.mrna1;Target=FBgn0010434.1 1507 4488 +
Chr2	stalkie_big_nohaplotig	exon	2076889	2077110	100	+	.	Parent=FBgn0010434.1.mrna1;Target=FBgn0010434.1 4489 4710 +
Chr2	stalkie_big_nohaplotig	exon	2077788	2077895	100	+	.	Parent=FBgn0010434.1.mrna1;Target=FBgn0010434.1 4711 4818 +
Chr2	stalkie_big_nohaplotig	exon	2078057	2078224	100	+	.	Parent=FBgn0010434.1.mrna1;Target=FBgn0010434.1 4819 4986 +
Chr2	stalkie_big_nohaplotig	exon	2079148	2079258	100	+	.	Parent=FBgn0010434.1.mrna1;Target=FBgn0010434.1 4987 5097 +
Chr2	stalkie_big_nohaplotig	exon	2079326	2079388	100	+	.	Parent=FBgn0010434.1.mrna1;Target=FBgn0010434.1 5098 5160 +
Chr2	stalkie_big_nohaplotig	CDS	2068112	2068230	.	+	0	Parent=FBgn0010434.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2076365	2076637	.	-	.	ID=comp105679_c0_seq1.mrna1;geneID=comp105679_c0_seq1.path1;Name=comp105679_c0_seq1;Dir=indeterminatecoverage=94.5;identity=99.6;matches=272;mismatches=1;indels=0;unknowns=0;Target=comp105679_c0_seq1 289 17 .;CDS_Target=comp105679_c0_seq1 34 17 .;locus=RLOC_00014001
Chr2	stalkie_big_nohaplotig	exon	2076365	2076637	99	-	.	Parent=comp105679_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2076620	2076637	.	-	0	Parent=comp105679_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2077087	2077805	.	+	.	ID=comp45938_c0_seq1.mrna1;geneID=comp45938_c0_seq1.path1;Name=comp45938_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=719;mismatches=0;indels=0;unknowns=0;Target=comp45938_c0_seq1 719 1 .;CDS_Target=comp45938_c0_seq1 83 3 .;locus=RLOC_00014001
Chr2	stalkie_big_nohaplotig	exon	2077087	2077805	100	+	.	Parent=comp45938_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2077089	2077169	.	+	0	Parent=comp45938_c0_seq1.mrna1
Chr2	gffcl	locus	1323060	1324190	.	-	.	ID=RLOC_00014002;geneIDs=FBgn0033702.1.path1;transcripts=FBgn0033702.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1323060	1324190	.	-	.	ID=FBgn0033702.1.mrna1;geneID=FBgn0033702.1.path1;Name=FBgn0033702.1;Dir=sensecoverage=100.0;identity=100.0;matches=1017;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014002
Chr2	stalkie_big_nohaplotig	exon	1323060	1323508	100	-	.	Parent=FBgn0033702.1.mrna1;Target=FBgn0033702.1 569 1017 +
Chr2	stalkie_big_nohaplotig	exon	1323567	1323916	100	-	.	Parent=FBgn0033702.1.mrna1;Target=FBgn0033702.1 219 568 +
Chr2	stalkie_big_nohaplotig	exon	1323973	1324190	100	-	.	Parent=FBgn0033702.1.mrna1;Target=FBgn0033702.1 1 218 +
Chr2	stalkie_big_nohaplotig	CDS	1323060	1323508	.	-	2	Parent=FBgn0033702.1.mrna1;Target=FBgn0033702.1 569 1017 +
Chr2	stalkie_big_nohaplotig	CDS	1323567	1323916	.	-	1	Parent=FBgn0033702.1.mrna1;Target=FBgn0033702.1 219 568 +
Chr2	stalkie_big_nohaplotig	CDS	1323973	1324190	.	-	0	Parent=FBgn0033702.1.mrna1;Target=FBgn0033702.1 1 218 +
Chr2	gffcl	locus	1348104	1349239	.	+	.	ID=RLOC_00014003;geneIDs=comp147845_c0_seq1.path1;transcripts=comp147845_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1348104	1349239	.	+	.	ID=comp147845_c0_seq1.mrna1;geneID=comp147845_c0_seq1.path1;Name=comp147845_c0_seq1;Dir=antisensecoverage=99.9;identity=99.0;matches=1068;mismatches=11;indels=0;unknowns=0;locus=RLOC_00014003
Chr2	stalkie_big_nohaplotig	exon	1348104	1348555	99	+	.	Parent=comp147845_c0_seq1.mrna1;Target=comp147845_c0_seq1 629 1080 -
Chr2	stalkie_big_nohaplotig	exon	1348613	1349239	98	+	.	Parent=comp147845_c0_seq1.mrna1;Target=comp147845_c0_seq1 2 628 -
Chr2	stalkie_big_nohaplotig	CDS	1348243	1348555	.	+	0	Parent=comp147845_c0_seq1.mrna1;Target=comp147845_c0_seq1 629 941 .
Chr2	stalkie_big_nohaplotig	CDS	1348613	1348914	.	+	2	Parent=comp147845_c0_seq1.mrna1;Target=comp147845_c0_seq1 327 628 .
Chr2	gffcl	locus	1358498	1362489	.	-	.	ID=RLOC_00014004;geneIDs=FBgn0028484.1.path1;transcripts=FBgn0028484.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1358498	1362489	.	-	.	ID=FBgn0028484.1.mrna1;geneID=FBgn0028484.1.path1;Name=FBgn0028484.1;Dir=sensecoverage=100.0;identity=99.5;matches=3433;mismatches=17;indels=0;unknowns=0;locus=RLOC_00014004
Chr2	stalkie_big_nohaplotig	exon	1358498	1358594	100	-	.	Parent=FBgn0028484.1.mrna1;Target=FBgn0028484.1 3354 3450 +
Chr2	stalkie_big_nohaplotig	exon	1358873	1360099	99	-	.	Parent=FBgn0028484.1.mrna1;Target=FBgn0028484.1 2127 3353 +
Chr2	stalkie_big_nohaplotig	exon	1360162	1360822	98	-	.	Parent=FBgn0028484.1.mrna1;Target=FBgn0028484.1 1466 2126 +
Chr2	stalkie_big_nohaplotig	exon	1360884	1361206	100	-	.	Parent=FBgn0028484.1.mrna1;Target=FBgn0028484.1 1143 1465 +
Chr2	stalkie_big_nohaplotig	exon	1361270	1361940	99	-	.	Parent=FBgn0028484.1.mrna1;Target=FBgn0028484.1 472 1142 +
Chr2	stalkie_big_nohaplotig	exon	1362019	1362489	99	-	.	Parent=FBgn0028484.1.mrna1;Target=FBgn0028484.1 1 471 +
Chr2	stalkie_big_nohaplotig	CDS	1358498	1358594	.	-	1	Parent=FBgn0028484.1.mrna1;Target=FBgn0028484.1 3354 3450 +
Chr2	stalkie_big_nohaplotig	CDS	1358873	1360099	.	-	1	Parent=FBgn0028484.1.mrna1;Target=FBgn0028484.1 2127 3353 +
Chr2	stalkie_big_nohaplotig	CDS	1360162	1360822	.	-	2	Parent=FBgn0028484.1.mrna1;Target=FBgn0028484.1 1466 2126 +
Chr2	stalkie_big_nohaplotig	CDS	1360884	1361206	.	-	1	Parent=FBgn0028484.1.mrna1;Target=FBgn0028484.1 1143 1465 +
Chr2	stalkie_big_nohaplotig	CDS	1361270	1361940	.	-	0	Parent=FBgn0028484.1.mrna1;Target=FBgn0028484.1 472 1142 +
Chr2	stalkie_big_nohaplotig	CDS	1362019	1362489	.	-	0	Parent=FBgn0028484.1.mrna1;Target=FBgn0028484.1 1 471 +
Chr2	gffcl	locus	1374784	1377235	.	-	.	ID=RLOC_00014005;geneIDs=FBgn0033443.1.path1;transcripts=FBgn0033443.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1374784	1377235	.	-	.	ID=FBgn0033443.1.mrna1;geneID=FBgn0033443.1.path1;Name=FBgn0033443.1;Dir=sensecoverage=100.0;identity=99.9;matches=1927;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014005
Chr2	stalkie_big_nohaplotig	exon	1374784	1375031	100	-	.	Parent=FBgn0033443.1.mrna1;Target=FBgn0033443.1 1682 1929 +
Chr2	stalkie_big_nohaplotig	exon	1375093	1375269	100	-	.	Parent=FBgn0033443.1.mrna1;Target=FBgn0033443.1 1505 1681 +
Chr2	stalkie_big_nohaplotig	exon	1375340	1375616	100	-	.	Parent=FBgn0033443.1.mrna1;Target=FBgn0033443.1 1228 1504 +
Chr2	stalkie_big_nohaplotig	exon	1375685	1375874	99	-	.	Parent=FBgn0033443.1.mrna1;Target=FBgn0033443.1 1038 1227 +
Chr2	stalkie_big_nohaplotig	exon	1375935	1376038	100	-	.	Parent=FBgn0033443.1.mrna1;Target=FBgn0033443.1 934 1037 +
Chr2	stalkie_big_nohaplotig	exon	1376099	1376369	100	-	.	Parent=FBgn0033443.1.mrna1;Target=FBgn0033443.1 663 933 +
Chr2	stalkie_big_nohaplotig	exon	1376435	1376660	100	-	.	Parent=FBgn0033443.1.mrna1;Target=FBgn0033443.1 437 662 +
Chr2	stalkie_big_nohaplotig	exon	1376734	1377025	99	-	.	Parent=FBgn0033443.1.mrna1;Target=FBgn0033443.1 145 436 +
Chr2	stalkie_big_nohaplotig	exon	1377092	1377235	100	-	.	Parent=FBgn0033443.1.mrna1;Target=FBgn0033443.1 1 144 +
Chr2	stalkie_big_nohaplotig	CDS	1374784	1375031	.	-	2	Parent=FBgn0033443.1.mrna1;Target=FBgn0033443.1 1682 1929 +
Chr2	stalkie_big_nohaplotig	CDS	1375093	1375269	.	-	2	Parent=FBgn0033443.1.mrna1;Target=FBgn0033443.1 1505 1681 +
Chr2	stalkie_big_nohaplotig	CDS	1375340	1375616	.	-	0	Parent=FBgn0033443.1.mrna1;Target=FBgn0033443.1 1228 1504 +
Chr2	stalkie_big_nohaplotig	CDS	1375685	1375874	.	-	1	Parent=FBgn0033443.1.mrna1;Target=FBgn0033443.1 1038 1227 +
Chr2	stalkie_big_nohaplotig	CDS	1375935	1376038	.	-	0	Parent=FBgn0033443.1.mrna1;Target=FBgn0033443.1 934 1037 +
Chr2	stalkie_big_nohaplotig	CDS	1376099	1376369	.	-	1	Parent=FBgn0033443.1.mrna1;Target=FBgn0033443.1 663 933 +
Chr2	stalkie_big_nohaplotig	CDS	1376435	1376660	.	-	2	Parent=FBgn0033443.1.mrna1;Target=FBgn0033443.1 437 662 +
Chr2	stalkie_big_nohaplotig	CDS	1376734	1377025	.	-	0	Parent=FBgn0033443.1.mrna1;Target=FBgn0033443.1 145 436 +
Chr2	stalkie_big_nohaplotig	CDS	1377092	1377235	.	-	0	Parent=FBgn0033443.1.mrna1;Target=FBgn0033443.1 1 144 +
Chr2	gffcl	locus	1377674	1378075	.	+	.	ID=RLOC_00014006;geneIDs=comp142477_c0_seq1.path1;transcripts=comp142477_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1377674	1378075	.	+	.	ID=comp142477_c0_seq1.mrna1;geneID=comp142477_c0_seq1.path1;Name=comp142477_c0_seq1;Dir=indeterminatecoverage=99.5;identity=93.3;matches=376;mismatches=20;indels=7;unknowns=0;Target=comp142477_c0_seq1 397 1 .;CDS_Target=comp142477_c0_seq1 85 2 .;locus=RLOC_00014006
Chr2	stalkie_big_nohaplotig	exon	1377674	1378075	93	+	.	Parent=comp142477_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	1377675	1377764	.	+	0	Parent=comp142477_c0_seq1.mrna1
Chr2	gffcl	locus	1403740	1406639	.	+	.	ID=RLOC_00014007;geneIDs=FBgn0035968.1.path1;transcripts=FBgn0035968.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1403740	1406639	.	+	.	ID=FBgn0035968.1.mrna1;geneID=FBgn0035968.1.path1;Name=FBgn0035968.1;Dir=sensecoverage=100.0;identity=100.0;matches=1839;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014007
Chr2	stalkie_big_nohaplotig	exon	1403740	1404547	100	+	.	Parent=FBgn0035968.1.mrna1;Target=FBgn0035968.1 1 808 +
Chr2	stalkie_big_nohaplotig	exon	1404616	1404818	100	+	.	Parent=FBgn0035968.1.mrna1;Target=FBgn0035968.1 809 1011 +
Chr2	stalkie_big_nohaplotig	exon	1405638	1405940	100	+	.	Parent=FBgn0035968.1.mrna1;Target=FBgn0035968.1 1012 1314 +
Chr2	stalkie_big_nohaplotig	exon	1405999	1406129	100	+	.	Parent=FBgn0035968.1.mrna1;Target=FBgn0035968.1 1315 1445 +
Chr2	stalkie_big_nohaplotig	exon	1406185	1406359	100	+	.	Parent=FBgn0035968.1.mrna1;Target=FBgn0035968.1 1446 1620 +
Chr2	stalkie_big_nohaplotig	exon	1406421	1406639	100	+	.	Parent=FBgn0035968.1.mrna1;Target=FBgn0035968.1 1621 1839 +
Chr2	stalkie_big_nohaplotig	CDS	1403740	1404547	.	+	0	Parent=FBgn0035968.1.mrna1;Target=FBgn0035968.1 1 808 +
Chr2	stalkie_big_nohaplotig	CDS	1404616	1404818	.	+	2	Parent=FBgn0035968.1.mrna1;Target=FBgn0035968.1 809 1011 +
Chr2	stalkie_big_nohaplotig	CDS	1405638	1405940	.	+	0	Parent=FBgn0035968.1.mrna1;Target=FBgn0035968.1 1012 1314 +
Chr2	stalkie_big_nohaplotig	CDS	1405999	1406129	.	+	0	Parent=FBgn0035968.1.mrna1;Target=FBgn0035968.1 1315 1445 +
Chr2	stalkie_big_nohaplotig	CDS	1406185	1406359	.	+	1	Parent=FBgn0035968.1.mrna1;Target=FBgn0035968.1 1446 1620 +
Chr2	stalkie_big_nohaplotig	CDS	1406421	1406639	.	+	0	Parent=FBgn0035968.1.mrna1;Target=FBgn0035968.1 1621 1839 +
Chr2	stalkie_big_nohaplotig	mRNA	1414015	3283916	.	-	.	ID=comp135391_c1_seq1.mrna1;geneID=comp135391_c1_seq1.path1;Name=comp135391_c1_seq1;Dir=indeterminatecoverage=95.7;identity=99.6;matches=977;mismatches=1;indels=3;unknowns=0;Target=comp135391_c1_seq1 676 497 .;locus=RLOC_00014008
Chr2	stalkie_big_nohaplotig	exon	1414015	1414018	100	-	.	Parent=comp135391_c1_seq1.mrna1;Target=comp135391_c1_seq1 985 982 .
Chr2	stalkie_big_nohaplotig	exon	1420762	1420764	100	-	.	Parent=comp135391_c1_seq1.mrna1;Target=comp135391_c1_seq1 981 979 .
Chr2	stalkie_big_nohaplotig	exon	3282946	3283916	99	-	.	Parent=comp135391_c1_seq1.mrna1;Target=comp135391_c1_seq1 978 5 .
Chr2	stalkie_big_nohaplotig	CDS	3283245	3283424	.	-	0	Parent=comp135391_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3283081	3286110	.	-	.	ID=comp144239_c0_seq1.mrna1;geneID=comp144239_c0_seq1.path1;Name=comp144239_c0_seq1;Dir=sensecoverage=100.0;identity=98.4;matches=960;mismatches=8;indels=8;unknowns=0;Target=comp144239_c0_seq1 315 500 +;locus=RLOC_00014008
Chr2	stalkie_big_nohaplotig	exon	3283081	3283102	100	-	.	Parent=comp144239_c0_seq1.mrna1;Target=comp144239_c0_seq1 951 972 +
Chr2	stalkie_big_nohaplotig	exon	3285161	3286110	98	-	.	Parent=comp144239_c0_seq1.mrna1;Target=comp144239_c0_seq1 1 950 +
Chr2	stalkie_big_nohaplotig	CDS	3285614	3285799	.	-	0	Parent=comp144239_c0_seq1.mrna1
Chr2	gffcl	locus	1422196	1426596	.	+	.	ID=RLOC_00014009;geneIDs=FBgn0028886.1.path1;transcripts=FBgn0028886.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1422196	1426596	.	+	.	ID=FBgn0028886.1.mrna1;geneID=FBgn0028886.1.path1;Name=FBgn0028886.1;Dir=sensecoverage=100.0;identity=99.8;matches=1893;mismatches=4;indels=0;unknowns=11;locus=RLOC_00014009
Chr2	stalkie_big_nohaplotig	exon	1422196	1422300	99	+	.	Parent=FBgn0028886.1.mrna1;Target=FBgn0028886.1 1 105 +
Chr2	stalkie_big_nohaplotig	exon	1422365	1422635	100	+	.	Parent=FBgn0028886.1.mrna1;Target=FBgn0028886.1 106 376 +
Chr2	stalkie_big_nohaplotig	exon	1424786	1425056	99	+	.	Parent=FBgn0028886.1.mrna1;Target=FBgn0028886.1 377 647 +
Chr2	stalkie_big_nohaplotig	exon	1425151	1425421	99	+	.	Parent=FBgn0028886.1.mrna1;Target=FBgn0028886.1 648 918 +
Chr2	stalkie_big_nohaplotig	exon	1425484	1425954	99	+	.	Parent=FBgn0028886.1.mrna1;Target=FBgn0028886.1 919 1389 +
Chr2	stalkie_big_nohaplotig	exon	1426020	1426296	100	+	.	Parent=FBgn0028886.1.mrna1;Target=FBgn0028886.1 1390 1666 +
Chr2	stalkie_big_nohaplotig	exon	1426355	1426596	100	+	.	Parent=FBgn0028886.1.mrna1;Target=FBgn0028886.1 1667 1908 +
Chr2	stalkie_big_nohaplotig	CDS	1422196	1422300	.	+	0	Parent=FBgn0028886.1.mrna1;Target=FBgn0028886.1 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	1422365	1422635	.	+	0	Parent=FBgn0028886.1.mrna1;Target=FBgn0028886.1 106 376 +
Chr2	stalkie_big_nohaplotig	CDS	1424786	1425056	.	+	2	Parent=FBgn0028886.1.mrna1;Target=FBgn0028886.1 377 647 +
Chr2	stalkie_big_nohaplotig	CDS	1425151	1425421	.	+	1	Parent=FBgn0028886.1.mrna1;Target=FBgn0028886.1 648 918 +
Chr2	stalkie_big_nohaplotig	CDS	1425484	1425954	.	+	0	Parent=FBgn0028886.1.mrna1;Target=FBgn0028886.1 919 1389 +
Chr2	stalkie_big_nohaplotig	CDS	1426020	1426296	.	+	0	Parent=FBgn0028886.1.mrna1;Target=FBgn0028886.1 1390 1666 +
Chr2	stalkie_big_nohaplotig	CDS	1426355	1426596	.	+	2	Parent=FBgn0028886.1.mrna1;Target=FBgn0028886.1 1667 1908 +
Chr2	gffcl	locus	1423873	1424601	.	+	.	ID=RLOC_00014010;geneIDs=comp150362_c0_seq1.path1;transcripts=comp150362_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1423873	1424601	.	+	.	ID=comp150362_c0_seq1.mrna1;geneID=comp150362_c0_seq1.path1;Name=comp150362_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=725;mismatches=4;indels=6;unknowns=0;Target=comp150362_c0_seq1 735 1 .;CDS_Target=comp150362_c0_seq1 518 363 .;locus=RLOC_00014010
Chr2	stalkie_big_nohaplotig	exon	1423873	1424601	98	+	.	Parent=comp150362_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	1424229	1424384	.	+	0	Parent=comp150362_c0_seq1.mrna1
Chr2	gffcl	locus	1426937	1427817	.	-	.	ID=RLOC_00014011;geneIDs=FBgn0030239.1.path1;transcripts=FBgn0030239.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1426937	1427817	.	-	.	ID=FBgn0030239.1.mrna1;geneID=FBgn0030239.1.path1;Name=FBgn0030239.1;Dir=sensecoverage=100.0;identity=99.3;matches=754;mismatches=4;indels=1;unknowns=0;Target=FBgn0030239.1 3 23 +;locus=RLOC_00014011
Chr2	stalkie_big_nohaplotig	exon	1426937	1427047	99	-	.	Parent=FBgn0030239.1.mrna1;Target=FBgn0030239.1 649 759 +
Chr2	stalkie_big_nohaplotig	exon	1427105	1427595	99	-	.	Parent=FBgn0030239.1.mrna1;Target=FBgn0030239.1 158 648 +
Chr2	stalkie_big_nohaplotig	exon	1427662	1427817	99	-	.	Parent=FBgn0030239.1.mrna1;Target=FBgn0030239.1 1 157 +
Chr2	stalkie_big_nohaplotig	CDS	1427796	1427815	.	-	0	Parent=FBgn0030239.1.mrna1
Chr2	gffcl	locus	1510431	1520123	.	.	.	ID=RLOC_00014014;geneIDs=FBgn0034999.1.path1,comp117194_c0_seq1.path1;transcripts=FBgn0034999.1.mrna1,comp117194_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1510431	1520123	.	+	.	ID=FBgn0034999.1.mrna1;geneID=FBgn0034999.1.path1;Name=FBgn0034999.1;Dir=sensecoverage=100.0;identity=100.0;matches=2057;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014014
Chr2	stalkie_big_nohaplotig	exon	1510431	1510450	100	+	.	Parent=FBgn0034999.1.mrna1;Target=FBgn0034999.1 1 20 +
Chr2	stalkie_big_nohaplotig	exon	1517168	1517422	99	+	.	Parent=FBgn0034999.1.mrna1;Target=FBgn0034999.1 21 275 +
Chr2	stalkie_big_nohaplotig	exon	1517508	1517998	100	+	.	Parent=FBgn0034999.1.mrna1;Target=FBgn0034999.1 276 766 +
Chr2	stalkie_big_nohaplotig	exon	1518062	1518212	100	+	.	Parent=FBgn0034999.1.mrna1;Target=FBgn0034999.1 767 917 +
Chr2	stalkie_big_nohaplotig	exon	1518852	1519246	100	+	.	Parent=FBgn0034999.1.mrna1;Target=FBgn0034999.1 918 1312 +
Chr2	stalkie_big_nohaplotig	exon	1519316	1519755	100	+	.	Parent=FBgn0034999.1.mrna1;Target=FBgn0034999.1 1313 1752 +
Chr2	stalkie_big_nohaplotig	exon	1519818	1520123	100	+	.	Parent=FBgn0034999.1.mrna1;Target=FBgn0034999.1 1753 2058 +
Chr2	stalkie_big_nohaplotig	CDS	1510431	1510450	.	+	0	Parent=FBgn0034999.1.mrna1;Target=FBgn0034999.1 1 20 +
Chr2	stalkie_big_nohaplotig	CDS	1517168	1517422	.	+	1	Parent=FBgn0034999.1.mrna1;Target=FBgn0034999.1 21 275 +
Chr2	stalkie_big_nohaplotig	CDS	1517508	1517998	.	+	1	Parent=FBgn0034999.1.mrna1;Target=FBgn0034999.1 276 766 +
Chr2	stalkie_big_nohaplotig	CDS	1518062	1518212	.	+	2	Parent=FBgn0034999.1.mrna1;Target=FBgn0034999.1 767 917 +
Chr2	stalkie_big_nohaplotig	CDS	1518852	1519246	.	+	1	Parent=FBgn0034999.1.mrna1;Target=FBgn0034999.1 918 1312 +
Chr2	stalkie_big_nohaplotig	CDS	1519316	1519755	.	+	2	Parent=FBgn0034999.1.mrna1;Target=FBgn0034999.1 1313 1752 +
Chr2	stalkie_big_nohaplotig	CDS	1519818	1520123	.	+	0	Parent=FBgn0034999.1.mrna1;Target=FBgn0034999.1 1753 2058 +
Chr2	stalkie_big_nohaplotig	mRNA	1518189	1518873	.	-	.	ID=comp117194_c0_seq1.mrna1;geneID=comp117194_c0_seq1.path1;Name=comp117194_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=685;mismatches=0;indels=0;unknowns=0;Target=comp117194_c0_seq1 685 1 .;CDS_Target=comp117194_c0_seq1 246 109 .;locus=RLOC_00014014
Chr2	stalkie_big_nohaplotig	exon	1518189	1518873	100	-	.	Parent=comp117194_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	1518628	1518765	.	-	0	Parent=comp117194_c0_seq1.mrna1
Chr2	gffcl	locus	1511813	1512802	.	+	.	ID=RLOC_00014015;geneIDs=comp150224_c1_seq1.path1;transcripts=comp150224_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1511813	1512802	.	+	.	ID=comp150224_c1_seq1.mrna1;geneID=comp150224_c1_seq1.path1;Name=comp150224_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=982;mismatches=8;indels=1;unknowns=0;Target=comp150224_c1_seq1 991 1 .;CDS_Target=comp150224_c1_seq1 375 208 .;locus=RLOC_00014015
Chr2	stalkie_big_nohaplotig	exon	1511813	1512802	99	+	.	Parent=comp150224_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	1512020	1512186	.	+	0	Parent=comp150224_c1_seq1.mrna1
Chr2	gffcl	locus	1550180	1575869	.	+	.	ID=RLOC_00014016;geneIDs=FBgn0003888.1.path1,comp154675_c0_seq1.path1;transcripts=FBgn0003888.1.mrna1,comp154675_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1550180	1575869	.	+	.	ID=FBgn0003888.1.mrna1;geneID=FBgn0003888.1.path1;Name=FBgn0003888.1;Dir=sensecoverage=100.0;identity=99.6;matches=1375;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014016
Chr2	stalkie_big_nohaplotig	exon	1550180	1550254	98	+	.	Parent=FBgn0003888.1.mrna1;Target=FBgn0003888.1 1 75 +
Chr2	stalkie_big_nohaplotig	exon	1572758	1572866	100	+	.	Parent=FBgn0003888.1.mrna1;Target=FBgn0003888.1 76 184 +
Chr2	stalkie_big_nohaplotig	exon	1574608	1574852	100	+	.	Parent=FBgn0003888.1.mrna1;Target=FBgn0003888.1 185 429 +
Chr2	stalkie_big_nohaplotig	exon	1574919	1575869	99	+	.	Parent=FBgn0003888.1.mrna1;Target=FBgn0003888.1 430 1380 +
Chr2	stalkie_big_nohaplotig	CDS	1550180	1550254	.	+	0	Parent=FBgn0003888.1.mrna1;Target=FBgn0003888.1 1 75 +
Chr2	stalkie_big_nohaplotig	CDS	1572758	1572866	.	+	0	Parent=FBgn0003888.1.mrna1;Target=FBgn0003888.1 76 184 +
Chr2	stalkie_big_nohaplotig	CDS	1574608	1574852	.	+	2	Parent=FBgn0003888.1.mrna1;Target=FBgn0003888.1 185 429 +
Chr2	stalkie_big_nohaplotig	CDS	1574919	1575869	.	+	0	Parent=FBgn0003888.1.mrna1;Target=FBgn0003888.1 430 1380 +
Chr2	stalkie_big_nohaplotig	mRNA	1572848	1574430	.	+	.	ID=comp154675_c0_seq1.mrna1;geneID=comp154675_c0_seq1.path1;Name=comp154675_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.6;matches=1578;mismatches=5;indels=1;unknowns=0;Target=comp154675_c0_seq1 1586 3 .;CDS_Target=comp154675_c0_seq1 1281 1045 .;locus=RLOC_00014016
Chr2	stalkie_big_nohaplotig	exon	1572848	1574430	99	+	.	Parent=comp154675_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	1573889	1574125	.	+	0	Parent=comp154675_c0_seq1.mrna1
Chr2	gffcl	locus	1610054	1615517	.	-	.	ID=RLOC_00014017;geneIDs=comp162833_c1_seq1.path1;transcripts=comp162833_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1610054	1615517	.	-	.	ID=comp162833_c1_seq1.mrna1;geneID=comp162833_c1_seq1.path1;Name=comp162833_c1_seq1;Dir=antisensecoverage=99.4;identity=99.3;matches=3481;mismatches=20;indels=4;unknowns=0;locus=RLOC_00014017
Chr2	stalkie_big_nohaplotig	exon	1610054	1610888	97	-	.	Parent=comp162833_c1_seq1.mrna1;Target=comp162833_c1_seq1 21 855 -
Chr2	stalkie_big_nohaplotig	exon	1610950	1611461	100	-	.	Parent=comp162833_c1_seq1.mrna1;Target=comp162833_c1_seq1 856 1367 -
Chr2	stalkie_big_nohaplotig	exon	1611523	1611555	100	-	.	Parent=comp162833_c1_seq1.mrna1;Target=comp162833_c1_seq1 1368 1400 -
Chr2	stalkie_big_nohaplotig	exon	1611623	1611661	100	-	.	Parent=comp162833_c1_seq1.mrna1;Target=comp162833_c1_seq1 1401 1439 -
Chr2	stalkie_big_nohaplotig	exon	1611720	1611791	100	-	.	Parent=comp162833_c1_seq1.mrna1;Target=comp162833_c1_seq1 1440 1511 -
Chr2	stalkie_big_nohaplotig	exon	1611860	1613239	99	-	.	Parent=comp162833_c1_seq1.mrna1;Target=comp162833_c1_seq1 1512 2892 -
Chr2	stalkie_big_nohaplotig	exon	1613956	1614360	100	-	.	Parent=comp162833_c1_seq1.mrna1;Target=comp162833_c1_seq1 2893 3297 -
Chr2	stalkie_big_nohaplotig	exon	1614416	1614502	96	-	.	Parent=comp162833_c1_seq1.mrna1;Target=comp162833_c1_seq1 3298 3387 -
Chr2	stalkie_big_nohaplotig	exon	1615380	1615517	100	-	.	Parent=comp162833_c1_seq1.mrna1;Target=comp162833_c1_seq1 3388 3525 -
Chr2	stalkie_big_nohaplotig	CDS	1613031	1613239	.	-	0	Parent=comp162833_c1_seq1.mrna1;Target=comp162833_c1_seq1 2683 2892 .
Chr2	stalkie_big_nohaplotig	CDS	1613956	1614360	.	-	0	Parent=comp162833_c1_seq1.mrna1;Target=comp162833_c1_seq1 2893 3297 .
Chr2	stalkie_big_nohaplotig	CDS	1614416	1614445	.	-	0	Parent=comp162833_c1_seq1.mrna1;Target=comp162833_c1_seq1 3298 3327 .
Chr2	gffcl	locus	1669007	1671294	.	-	.	ID=RLOC_00014019;geneIDs=comp161480_c2_seq1.path2;transcripts=comp161480_c2_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	1669007	1671294	.	-	.	ID=comp161480_c2_seq1.mrna2;geneID=comp161480_c2_seq1.path2;Name=comp161480_c2_seq1;Dir=indeterminatecoverage=59.2;identity=99.8;matches=2284;mismatches=4;indels=0;unknowns=0;Target=comp161480_c2_seq1 2288 1 .;CDS_Target=comp161480_c2_seq1 2286 1411 .;locus=RLOC_00014019
Chr2	stalkie_big_nohaplotig	exon	1669007	1671294	99	-	.	Parent=comp161480_c2_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	1669009	1669884	.	-	0	Parent=comp161480_c2_seq1.mrna2
Chr2	gffcl	locus	1684868	1715740	.	-	.	ID=RLOC_00014020;geneIDs=FBgn0034997.1.path1,comp158771_c1_seq1.path1;transcripts=comp158771_c1_seq1.mrna1,FBgn0034997.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1684868	1715740	.	-	.	ID=comp158771_c1_seq1.mrna1;geneID=comp158771_c1_seq1.path1;Name=comp158771_c1_seq1;Dir=sensecoverage=99.9;identity=99.0;matches=4227;mismatches=24;indels=19;unknowns=0;locus=RLOC_00014020
Chr2	stalkie_big_nohaplotig	exon	1684868	1686508	97	-	.	Parent=comp158771_c1_seq1.mrna1;Target=comp158771_c1_seq1 2615 4274 +
Chr2	stalkie_big_nohaplotig	exon	1687448	1687633	100	-	.	Parent=comp158771_c1_seq1.mrna1;Target=comp158771_c1_seq1 2429 2614 +
Chr2	stalkie_big_nohaplotig	exon	1687696	1687990	100	-	.	Parent=comp158771_c1_seq1.mrna1;Target=comp158771_c1_seq1 2134 2428 +
Chr2	stalkie_big_nohaplotig	exon	1688058	1688311	100	-	.	Parent=comp158771_c1_seq1.mrna1;Target=comp158771_c1_seq1 1880 2133 +
Chr2	stalkie_big_nohaplotig	exon	1689829	1691080	99	-	.	Parent=comp158771_c1_seq1.mrna1;Target=comp158771_c1_seq1 628 1879 +
Chr2	stalkie_big_nohaplotig	exon	1691141	1691328	100	-	.	Parent=comp158771_c1_seq1.mrna1;Target=comp158771_c1_seq1 440 627 +
Chr2	stalkie_big_nohaplotig	exon	1715306	1715740	99	-	.	Parent=comp158771_c1_seq1.mrna1;Target=comp158771_c1_seq1 5 439 +
Chr2	stalkie_big_nohaplotig	CDS	1686451	1686508	.	-	1	Parent=comp158771_c1_seq1.mrna1;Target=comp158771_c1_seq1 2615 2672 +
Chr2	stalkie_big_nohaplotig	CDS	1687448	1687633	.	-	1	Parent=comp158771_c1_seq1.mrna1;Target=comp158771_c1_seq1 2429 2614 +
Chr2	stalkie_big_nohaplotig	CDS	1687696	1687990	.	-	2	Parent=comp158771_c1_seq1.mrna1;Target=comp158771_c1_seq1 2134 2428 +
Chr2	stalkie_big_nohaplotig	CDS	1688058	1688311	.	-	1	Parent=comp158771_c1_seq1.mrna1;Target=comp158771_c1_seq1 1880 2133 +
Chr2	stalkie_big_nohaplotig	CDS	1689829	1691080	.	-	2	Parent=comp158771_c1_seq1.mrna1;Target=comp158771_c1_seq1 628 1879 +
Chr2	stalkie_big_nohaplotig	CDS	1691141	1691207	.	-	0	Parent=comp158771_c1_seq1.mrna1;Target=comp158771_c1_seq1 561 627 +
Chr2	stalkie_big_nohaplotig	mRNA	1686752	1691264	.	-	.	ID=FBgn0034997.1.mrna1;geneID=FBgn0034997.1.path1;Name=FBgn0034997.1;Dir=sensecoverage=100.0;identity=99.8;matches=2194;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014020
Chr2	stalkie_big_nohaplotig	exon	1686752	1686839	100	-	.	Parent=FBgn0034997.1.mrna1;Target=FBgn0034997.1 2112 2199 +
Chr2	stalkie_big_nohaplotig	exon	1687448	1687633	100	-	.	Parent=FBgn0034997.1.mrna1;Target=FBgn0034997.1 1926 2111 +
Chr2	stalkie_big_nohaplotig	exon	1687696	1687990	100	-	.	Parent=FBgn0034997.1.mrna1;Target=FBgn0034997.1 1631 1925 +
Chr2	stalkie_big_nohaplotig	exon	1688058	1688311	100	-	.	Parent=FBgn0034997.1.mrna1;Target=FBgn0034997.1 1377 1630 +
Chr2	stalkie_big_nohaplotig	exon	1689829	1691080	99	-	.	Parent=FBgn0034997.1.mrna1;Target=FBgn0034997.1 125 1376 +
Chr2	stalkie_big_nohaplotig	exon	1691141	1691264	100	-	.	Parent=FBgn0034997.1.mrna1;Target=FBgn0034997.1 1 124 +
Chr2	stalkie_big_nohaplotig	CDS	1686752	1686839	.	-	1	Parent=FBgn0034997.1.mrna1;Target=FBgn0034997.1 2112 2199 +
Chr2	stalkie_big_nohaplotig	CDS	1687448	1687633	.	-	1	Parent=FBgn0034997.1.mrna1;Target=FBgn0034997.1 1926 2111 +
Chr2	stalkie_big_nohaplotig	CDS	1687696	1687990	.	-	2	Parent=FBgn0034997.1.mrna1;Target=FBgn0034997.1 1631 1925 +
Chr2	stalkie_big_nohaplotig	CDS	1688058	1688311	.	-	1	Parent=FBgn0034997.1.mrna1;Target=FBgn0034997.1 1377 1630 +
Chr2	stalkie_big_nohaplotig	CDS	1689829	1691080	.	-	2	Parent=FBgn0034997.1.mrna1;Target=FBgn0034997.1 125 1376 +
Chr2	stalkie_big_nohaplotig	CDS	1691141	1691264	.	-	0	Parent=FBgn0034997.1.mrna1;Target=FBgn0034997.1 1 124 +
Chr2	gffcl	locus	1714706	1715146	.	-	.	ID=RLOC_00014021;geneIDs=comp66970_c0_seq1.path1;transcripts=comp66970_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1714706	1715146	.	-	.	ID=comp66970_c0_seq1.mrna1;geneID=comp66970_c0_seq1.path1;Name=comp66970_c0_seq1;Dir=indeterminatecoverage=99.6;identity=97.1;matches=437;mismatches=4;indels=9;unknowns=0;Target=comp66970_c0_seq1 452 3 .;CDS_Target=comp66970_c0_seq1 331 5 .;locus=RLOC_00014021
Chr2	stalkie_big_nohaplotig	exon	1714706	1715146	97	-	.	Parent=comp66970_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	1714827	1715144	.	-	0	Parent=comp66970_c0_seq1.mrna1
Chr2	gffcl	locus	1728045	1758616	.	-	.	ID=RLOC_00014022;geneIDs=FBgn0050418.1.path1;transcripts=FBgn0050418.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1728045	1758616	.	-	.	ID=FBgn0050418.1.mrna1;geneID=FBgn0050418.1.path1;Name=FBgn0050418.1;Dir=sensecoverage=100.0;identity=100.0;matches=1836;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014022
Chr2	stalkie_big_nohaplotig	exon	1728045	1728288	100	-	.	Parent=FBgn0050418.1.mrna1;Target=FBgn0050418.1 1593 1836 +
Chr2	stalkie_big_nohaplotig	exon	1728348	1728485	100	-	.	Parent=FBgn0050418.1.mrna1;Target=FBgn0050418.1 1455 1592 +
Chr2	stalkie_big_nohaplotig	exon	1729113	1729246	100	-	.	Parent=FBgn0050418.1.mrna1;Target=FBgn0050418.1 1321 1454 +
Chr2	stalkie_big_nohaplotig	exon	1729828	1730073	100	-	.	Parent=FBgn0050418.1.mrna1;Target=FBgn0050418.1 1075 1320 +
Chr2	stalkie_big_nohaplotig	exon	1730148	1730401	100	-	.	Parent=FBgn0050418.1.mrna1;Target=FBgn0050418.1 821 1074 +
Chr2	stalkie_big_nohaplotig	exon	1730464	1730645	100	-	.	Parent=FBgn0050418.1.mrna1;Target=FBgn0050418.1 639 820 +
Chr2	stalkie_big_nohaplotig	exon	1730727	1730958	100	-	.	Parent=FBgn0050418.1.mrna1;Target=FBgn0050418.1 407 638 +
Chr2	stalkie_big_nohaplotig	exon	1731071	1731156	100	-	.	Parent=FBgn0050418.1.mrna1;Target=FBgn0050418.1 321 406 +
Chr2	stalkie_big_nohaplotig	exon	1758297	1758616	100	-	.	Parent=FBgn0050418.1.mrna1;Target=FBgn0050418.1 1 320 +
Chr2	stalkie_big_nohaplotig	CDS	1728045	1728288	.	-	1	Parent=FBgn0050418.1.mrna1;Target=FBgn0050418.1 1593 1836 +
Chr2	stalkie_big_nohaplotig	CDS	1728348	1728485	.	-	1	Parent=FBgn0050418.1.mrna1;Target=FBgn0050418.1 1455 1592 +
Chr2	stalkie_big_nohaplotig	CDS	1729113	1729246	.	-	0	Parent=FBgn0050418.1.mrna1;Target=FBgn0050418.1 1321 1454 +
Chr2	stalkie_big_nohaplotig	CDS	1729828	1730073	.	-	0	Parent=FBgn0050418.1.mrna1;Target=FBgn0050418.1 1075 1320 +
Chr2	stalkie_big_nohaplotig	CDS	1730148	1730401	.	-	2	Parent=FBgn0050418.1.mrna1;Target=FBgn0050418.1 821 1074 +
Chr2	stalkie_big_nohaplotig	CDS	1730464	1730645	.	-	1	Parent=FBgn0050418.1.mrna1;Target=FBgn0050418.1 639 820 +
Chr2	stalkie_big_nohaplotig	CDS	1730727	1730958	.	-	2	Parent=FBgn0050418.1.mrna1;Target=FBgn0050418.1 407 638 +
Chr2	stalkie_big_nohaplotig	CDS	1731071	1731156	.	-	1	Parent=FBgn0050418.1.mrna1;Target=FBgn0050418.1 321 406 +
Chr2	stalkie_big_nohaplotig	CDS	1758297	1758616	.	-	0	Parent=FBgn0050418.1.mrna1;Target=FBgn0050418.1 1 320 +
Chr2	gffcl	locus	1734698	1735487	.	-	.	ID=RLOC_00014023;geneIDs=FBgn0034654.2.path1;transcripts=FBgn0034654.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1734698	1735487	.	-	.	ID=FBgn0034654.2.mrna1;geneID=FBgn0034654.2.path1;Name=FBgn0034654.2;Dir=sensecoverage=100.0;identity=99.4;matches=659;mismatches=4;indels=0;unknowns=0;locus=RLOC_00014023
Chr2	stalkie_big_nohaplotig	exon	1734698	1734849	99	-	.	Parent=FBgn0034654.2.mrna1;Target=FBgn0034654.2 512 663 +
Chr2	stalkie_big_nohaplotig	exon	1734911	1735350	99	-	.	Parent=FBgn0034654.2.mrna1;Target=FBgn0034654.2 72 511 +
Chr2	stalkie_big_nohaplotig	exon	1735417	1735487	98	-	.	Parent=FBgn0034654.2.mrna1;Target=FBgn0034654.2 1 71 +
Chr2	stalkie_big_nohaplotig	CDS	1734698	1734849	.	-	2	Parent=FBgn0034654.2.mrna1;Target=FBgn0034654.2 512 663 +
Chr2	stalkie_big_nohaplotig	CDS	1734911	1735350	.	-	1	Parent=FBgn0034654.2.mrna1;Target=FBgn0034654.2 72 511 +
Chr2	stalkie_big_nohaplotig	CDS	1735417	1735487	.	-	0	Parent=FBgn0034654.2.mrna1;Target=FBgn0034654.2 1 71 +
Chr2	gffcl	locus	1736493	1737386	.	-	.	ID=RLOC_00014024;geneIDs=FBgn0034654.1.path1;transcripts=FBgn0034654.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1736493	1737386	.	-	.	ID=FBgn0034654.1.mrna1;geneID=FBgn0034654.1.path1;Name=FBgn0034654.1;Dir=sensecoverage=100.0;identity=99.0;matches=754;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014024
Chr2	stalkie_big_nohaplotig	exon	1736493	1736641	100	-	.	Parent=FBgn0034654.1.mrna1;Target=FBgn0034654.1 614 762 +
Chr2	stalkie_big_nohaplotig	exon	1736701	1737140	98	-	.	Parent=FBgn0034654.1.mrna1;Target=FBgn0034654.1 174 613 +
Chr2	stalkie_big_nohaplotig	exon	1737214	1737386	98	-	.	Parent=FBgn0034654.1.mrna1;Target=FBgn0034654.1 1 173 +
Chr2	stalkie_big_nohaplotig	CDS	1736493	1736641	.	-	2	Parent=FBgn0034654.1.mrna1;Target=FBgn0034654.1 614 762 +
Chr2	stalkie_big_nohaplotig	CDS	1736701	1737140	.	-	1	Parent=FBgn0034654.1.mrna1;Target=FBgn0034654.1 174 613 +
Chr2	stalkie_big_nohaplotig	CDS	1737214	1737386	.	-	0	Parent=FBgn0034654.1.mrna1;Target=FBgn0034654.1 1 173 +
Chr2	gffcl	locus	1839173	1882548	.	+	.	ID=RLOC_00014025;geneIDs=FBgn0050419.1.path1;transcripts=FBgn0050419.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1839173	1882548	.	+	.	ID=FBgn0050419.1.mrna1;geneID=FBgn0050419.1.path1;Name=FBgn0050419.1;Dir=sensecoverage=100.0;identity=99.8;matches=647;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014025
Chr2	stalkie_big_nohaplotig	exon	1839173	1839559	100	+	.	Parent=FBgn0050419.1.mrna1;Target=FBgn0050419.1 1 387 +
Chr2	stalkie_big_nohaplotig	exon	1882288	1882548	99	+	.	Parent=FBgn0050419.1.mrna1;Target=FBgn0050419.1 388 648 +
Chr2	stalkie_big_nohaplotig	CDS	1839173	1839559	.	+	0	Parent=FBgn0050419.1.mrna1;Target=FBgn0050419.1 1 387 +
Chr2	stalkie_big_nohaplotig	CDS	1882288	1882548	.	+	0	Parent=FBgn0050419.1.mrna1;Target=FBgn0050419.1 388 648 +
Chr2	gffcl	locus	1888514	1890041	.	+	.	ID=RLOC_00014026;geneIDs=comp160845_c0_seq1.path1;transcripts=comp160845_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1888514	1890041	.	+	.	ID=comp160845_c0_seq1.mrna1;geneID=comp160845_c0_seq1.path1;Name=comp160845_c0_seq1;Dir=indeterminatecoverage=98.6;identity=96.4;matches=1510;mismatches=18;indels=38;unknowns=0;Target=comp160845_c0_seq1 1567 2 .;CDS_Target=comp160845_c0_seq1 147 4 .;locus=RLOC_00014026
Chr2	stalkie_big_nohaplotig	exon	1888514	1890041	96	+	.	Parent=comp160845_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	1888516	1888659	.	+	0	Parent=comp160845_c0_seq1.mrna1
Chr2	gffcl	locus	1906294	1924693	.	+	.	ID=RLOC_00014027;geneIDs=comp150225_c0_seq1.path1;transcripts=comp150225_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1906294	1924693	.	+	.	ID=comp150225_c0_seq1.mrna1;geneID=comp150225_c0_seq1.path1;Name=comp150225_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=1501;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014027
Chr2	stalkie_big_nohaplotig	exon	1906294	1906928	100	+	.	Parent=comp150225_c0_seq1.mrna1;Target=comp150225_c0_seq1 1 635 +
Chr2	stalkie_big_nohaplotig	exon	1909705	1909863	100	+	.	Parent=comp150225_c0_seq1.mrna1;Target=comp150225_c0_seq1 636 794 +
Chr2	stalkie_big_nohaplotig	exon	1918712	1918796	100	+	.	Parent=comp150225_c0_seq1.mrna1;Target=comp150225_c0_seq1 795 879 +
Chr2	stalkie_big_nohaplotig	exon	1918866	1919011	100	+	.	Parent=comp150225_c0_seq1.mrna1;Target=comp150225_c0_seq1 880 1025 +
Chr2	stalkie_big_nohaplotig	exon	1924218	1924693	100	+	.	Parent=comp150225_c0_seq1.mrna1;Target=comp150225_c0_seq1 1026 1501 +
Chr2	stalkie_big_nohaplotig	CDS	1906296	1906928	.	+	0	Parent=comp150225_c0_seq1.mrna1;Target=comp150225_c0_seq1 3 635 +
Chr2	stalkie_big_nohaplotig	CDS	1909705	1909863	.	+	0	Parent=comp150225_c0_seq1.mrna1;Target=comp150225_c0_seq1 636 794 +
Chr2	stalkie_big_nohaplotig	CDS	1918712	1918796	.	+	0	Parent=comp150225_c0_seq1.mrna1;Target=comp150225_c0_seq1 795 879 +
Chr2	stalkie_big_nohaplotig	CDS	1918866	1919011	.	+	2	Parent=comp150225_c0_seq1.mrna1;Target=comp150225_c0_seq1 880 1025 +
Chr2	stalkie_big_nohaplotig	CDS	1924218	1924385	.	+	0	Parent=comp150225_c0_seq1.mrna1;Target=comp150225_c0_seq1 1026 1193 +
Chr2	gffcl	locus	1924909	1932944	.	-	.	ID=RLOC_00014028;geneIDs=FBgn0034989.1.path1;transcripts=FBgn0034989.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1924909	1932944	.	-	.	ID=FBgn0034989.1.mrna1;geneID=FBgn0034989.1.path1;Name=FBgn0034989.1;Dir=sensecoverage=100.0;identity=99.9;matches=3377;mismatches=4;indels=0;unknowns=0;locus=RLOC_00014028
Chr2	stalkie_big_nohaplotig	exon	1924909	1925073	100	-	.	Parent=FBgn0034989.1.mrna1;Target=FBgn0034989.1 3217 3381 +
Chr2	stalkie_big_nohaplotig	exon	1925130	1925829	100	-	.	Parent=FBgn0034989.1.mrna1;Target=FBgn0034989.1 2517 3216 +
Chr2	stalkie_big_nohaplotig	exon	1927235	1927379	99	-	.	Parent=FBgn0034989.1.mrna1;Target=FBgn0034989.1 2372 2516 +
Chr2	stalkie_big_nohaplotig	exon	1927654	1928427	99	-	.	Parent=FBgn0034989.1.mrna1;Target=FBgn0034989.1 1598 2371 +
Chr2	stalkie_big_nohaplotig	exon	1928489	1928610	100	-	.	Parent=FBgn0034989.1.mrna1;Target=FBgn0034989.1 1476 1597 +
Chr2	stalkie_big_nohaplotig	exon	1928667	1929051	100	-	.	Parent=FBgn0034989.1.mrna1;Target=FBgn0034989.1 1091 1475 +
Chr2	stalkie_big_nohaplotig	exon	1931794	1932520	99	-	.	Parent=FBgn0034989.1.mrna1;Target=FBgn0034989.1 364 1090 +
Chr2	stalkie_big_nohaplotig	exon	1932582	1932944	100	-	.	Parent=FBgn0034989.1.mrna1;Target=FBgn0034989.1 1 363 +
Chr2	stalkie_big_nohaplotig	CDS	1924909	1925073	.	-	0	Parent=FBgn0034989.1.mrna1;Target=FBgn0034989.1 3217 3381 +
Chr2	stalkie_big_nohaplotig	CDS	1925130	1925829	.	-	1	Parent=FBgn0034989.1.mrna1;Target=FBgn0034989.1 2517 3216 +
Chr2	stalkie_big_nohaplotig	CDS	1927235	1927379	.	-	2	Parent=FBgn0034989.1.mrna1;Target=FBgn0034989.1 2372 2516 +
Chr2	stalkie_big_nohaplotig	CDS	1927654	1928427	.	-	2	Parent=FBgn0034989.1.mrna1;Target=FBgn0034989.1 1598 2371 +
Chr2	stalkie_big_nohaplotig	CDS	1928489	1928610	.	-	1	Parent=FBgn0034989.1.mrna1;Target=FBgn0034989.1 1476 1597 +
Chr2	stalkie_big_nohaplotig	CDS	1928667	1929051	.	-	2	Parent=FBgn0034989.1.mrna1;Target=FBgn0034989.1 1091 1475 +
Chr2	stalkie_big_nohaplotig	CDS	1931794	1932520	.	-	0	Parent=FBgn0034989.1.mrna1;Target=FBgn0034989.1 364 1090 +
Chr2	stalkie_big_nohaplotig	CDS	1932582	1932944	.	-	0	Parent=FBgn0034989.1.mrna1;Target=FBgn0034989.1 1 363 +
Chr2	gffcl	locus	1933635	1935177	.	-	.	ID=RLOC_00014029;geneIDs=FBgn0034988.1.path1;transcripts=FBgn0034988.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1933635	1935177	.	-	.	ID=FBgn0034988.1.mrna1;geneID=FBgn0034988.1.path1;Name=FBgn0034988.1;Dir=sensecoverage=100.0;identity=99.7;matches=1086;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014029
Chr2	stalkie_big_nohaplotig	exon	1933635	1933769	100	-	.	Parent=FBgn0034988.1.mrna1;Target=FBgn0034988.1 955 1089 +
Chr2	stalkie_big_nohaplotig	exon	1933826	1934252	100	-	.	Parent=FBgn0034988.1.mrna1;Target=FBgn0034988.1 528 954 +
Chr2	stalkie_big_nohaplotig	exon	1934651	1935177	99	-	.	Parent=FBgn0034988.1.mrna1;Target=FBgn0034988.1 1 527 +
Chr2	stalkie_big_nohaplotig	CDS	1933635	1933769	.	-	0	Parent=FBgn0034988.1.mrna1;Target=FBgn0034988.1 955 1089 +
Chr2	stalkie_big_nohaplotig	CDS	1933826	1934252	.	-	1	Parent=FBgn0034988.1.mrna1;Target=FBgn0034988.1 528 954 +
Chr2	stalkie_big_nohaplotig	CDS	1934651	1935177	.	-	0	Parent=FBgn0034988.1.mrna1;Target=FBgn0034988.1 1 527 +
Chr2	gffcl	locus	1940075	1945560	.	-	.	ID=RLOC_00014030;geneIDs=FBgn0034987.1.path1;transcripts=FBgn0034987.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1940075	1945560	.	-	.	ID=FBgn0034987.1.mrna1;geneID=FBgn0034987.1.path1;Name=FBgn0034987.1;Dir=sensecoverage=100.0;identity=99.2;matches=5051;mismatches=0;indels=43;unknowns=0;Target=FBgn0034987.1 3 23 +;locus=RLOC_00014030
Chr2	stalkie_big_nohaplotig	exon	1940075	1944559	99	-	.	Parent=FBgn0034987.1.mrna1;Target=FBgn0034987.1 610 5052 +
Chr2	stalkie_big_nohaplotig	exon	1944824	1944978	100	-	.	Parent=FBgn0034987.1.mrna1;Target=FBgn0034987.1 455 609 +
Chr2	stalkie_big_nohaplotig	exon	1945042	1945097	100	-	.	Parent=FBgn0034987.1.mrna1;Target=FBgn0034987.1 399 454 +
Chr2	stalkie_big_nohaplotig	exon	1945164	1945560	99	-	.	Parent=FBgn0034987.1.mrna1;Target=FBgn0034987.1 1 398 +
Chr2	stalkie_big_nohaplotig	CDS	1945539	1945558	.	-	0	Parent=FBgn0034987.1.mrna1
Chr2	gffcl	locus	1950662	1950948	.	+	.	ID=RLOC_00014031;geneIDs=comp119155_c0_seq1.path1;transcripts=comp119155_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1950662	1950948	.	+	.	ID=comp119155_c0_seq1.mrna1;geneID=comp119155_c0_seq1.path1;Name=comp119155_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=285;mismatches=2;indels=0;unknowns=0;Target=comp119155_c0_seq1 287 1 .;CDS_Target=comp119155_c0_seq1 279 226 .;locus=RLOC_00014031
Chr2	stalkie_big_nohaplotig	exon	1950662	1950948	99	+	.	Parent=comp119155_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	1950887	1950940	.	+	0	Parent=comp119155_c0_seq1.mrna1
Chr2	gffcl	locus	1964797	1967231	.	.	.	ID=RLOC_00014032;geneIDs=comp135063_c0_seq1.path1,comp149165_c0_seq1.path1;transcripts=comp149165_c0_seq1.mrna1,comp135063_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1964797	1967231	.	-	.	ID=comp149165_c0_seq1.mrna1;geneID=comp149165_c0_seq1.path1;Name=comp149165_c0_seq1;Dir=sensecoverage=98.7;identity=98.5;matches=384;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014032
Chr2	stalkie_big_nohaplotig	exon	1964797	1964905	98	-	.	Parent=comp149165_c0_seq1.mrna1;Target=comp149165_c0_seq1 282 390 +
Chr2	stalkie_big_nohaplotig	exon	1965102	1965167	100	-	.	Parent=comp149165_c0_seq1.mrna1;Target=comp149165_c0_seq1 216 281 +
Chr2	stalkie_big_nohaplotig	exon	1965371	1965458	100	-	.	Parent=comp149165_c0_seq1.mrna1;Target=comp149165_c0_seq1 128 215 +
Chr2	stalkie_big_nohaplotig	exon	1966255	1966298	97	-	.	Parent=comp149165_c0_seq1.mrna1;Target=comp149165_c0_seq1 84 127 +
Chr2	stalkie_big_nohaplotig	exon	1966708	1966749	100	-	.	Parent=comp149165_c0_seq1.mrna1;Target=comp149165_c0_seq1 42 83 +
Chr2	stalkie_big_nohaplotig	exon	1967191	1967231	92	-	.	Parent=comp149165_c0_seq1.mrna1;Target=comp149165_c0_seq1 1 41 +
Chr2	stalkie_big_nohaplotig	CDS	1964850	1964905	.	-	2	Parent=comp149165_c0_seq1.mrna1;Target=comp149165_c0_seq1 282 337 +
Chr2	stalkie_big_nohaplotig	CDS	1965102	1965138	.	-	0	Parent=comp149165_c0_seq1.mrna1;Target=comp149165_c0_seq1 245 281 +
Chr2	stalkie_big_nohaplotig	mRNA	1964885	1965125	.	+	.	ID=comp135063_c0_seq1.mrna1;geneID=comp135063_c0_seq1.path1;Name=comp135063_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=238;mismatches=3;indels=0;unknowns=0;Target=comp135063_c0_seq1 241 1 .;CDS_Target=comp135063_c0_seq1 239 168 .;locus=RLOC_00014032
Chr2	stalkie_big_nohaplotig	exon	1964885	1965125	98	+	.	Parent=comp135063_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	1965052	1965123	.	+	0	Parent=comp135063_c0_seq1.mrna1
Chr2	gffcl	locus	1965438	1971555	.	+	.	ID=RLOC_00014033;geneIDs=comp149812_c1_seq1.path1;transcripts=comp149812_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1965438	1971555	.	+	.	ID=comp149812_c1_seq1.mrna1;geneID=comp149812_c1_seq1.path1;Name=comp149812_c1_seq1;Dir=sensecoverage=100.0;identity=99.2;matches=732;mismatches=5;indels=1;unknowns=0;Target=comp149812_c1_seq1 544 642 +;locus=RLOC_00014033
Chr2	stalkie_big_nohaplotig	exon	1965438	1966153	99	+	.	Parent=comp149812_c1_seq1.mrna1;Target=comp149812_c1_seq1 1 717 +
Chr2	stalkie_big_nohaplotig	exon	1971535	1971555	100	+	.	Parent=comp149812_c1_seq1.mrna1;Target=comp149812_c1_seq1 718 738 +
Chr2	stalkie_big_nohaplotig	CDS	1965980	1966078	.	+	0	Parent=comp149812_c1_seq1.mrna1
Chr2	gffcl	locus	1969258	1972490	.	-	.	ID=RLOC_00014034;geneIDs=FBgn0259937.1.path1;transcripts=FBgn0259937.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1969258	1972490	.	-	.	ID=FBgn0259937.1.mrna1;geneID=FBgn0259937.1.path1;Name=FBgn0259937.1;Dir=sensecoverage=100.0;identity=99.8;matches=1524;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014034
Chr2	stalkie_big_nohaplotig	exon	1969258	1969461	99	-	.	Parent=FBgn0259937.1.mrna1;Target=FBgn0259937.1 1324 1527 +
Chr2	stalkie_big_nohaplotig	exon	1970307	1970720	99	-	.	Parent=FBgn0259937.1.mrna1;Target=FBgn0259937.1 910 1323 +
Chr2	stalkie_big_nohaplotig	exon	1971001	1971275	99	-	.	Parent=FBgn0259937.1.mrna1;Target=FBgn0259937.1 635 909 +
Chr2	stalkie_big_nohaplotig	exon	1971512	1971763	100	-	.	Parent=FBgn0259937.1.mrna1;Target=FBgn0259937.1 383 634 +
Chr2	stalkie_big_nohaplotig	exon	1972001	1972363	100	-	.	Parent=FBgn0259937.1.mrna1;Target=FBgn0259937.1 20 382 +
Chr2	stalkie_big_nohaplotig	exon	1972472	1972490	100	-	.	Parent=FBgn0259937.1.mrna1;Target=FBgn0259937.1 1 19 +
Chr2	stalkie_big_nohaplotig	CDS	1969258	1969461	.	-	0	Parent=FBgn0259937.1.mrna1;Target=FBgn0259937.1 1324 1527 +
Chr2	stalkie_big_nohaplotig	CDS	1970307	1970720	.	-	0	Parent=FBgn0259937.1.mrna1;Target=FBgn0259937.1 910 1323 +
Chr2	stalkie_big_nohaplotig	CDS	1971001	1971275	.	-	2	Parent=FBgn0259937.1.mrna1;Target=FBgn0259937.1 635 909 +
Chr2	stalkie_big_nohaplotig	CDS	1971512	1971763	.	-	2	Parent=FBgn0259937.1.mrna1;Target=FBgn0259937.1 383 634 +
Chr2	stalkie_big_nohaplotig	CDS	1972001	1972363	.	-	2	Parent=FBgn0259937.1.mrna1;Target=FBgn0259937.1 20 382 +
Chr2	stalkie_big_nohaplotig	CDS	1972472	1972490	.	-	0	Parent=FBgn0259937.1.mrna1;Target=FBgn0259937.1 1 19 +
Chr2	gffcl	locus	1975487	1976804	.	+	.	ID=RLOC_00014035;geneIDs=FBgn0032105.1.path1;transcripts=FBgn0032105.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1975487	1976804	.	+	.	ID=FBgn0032105.1.mrna1;geneID=FBgn0032105.1.path1;Name=FBgn0032105.1;Dir=sensecoverage=100.0;identity=99.4;matches=972;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014035
Chr2	stalkie_big_nohaplotig	exon	1975487	1975750	98	+	.	Parent=FBgn0032105.1.mrna1;Target=FBgn0032105.1 1 264 +
Chr2	stalkie_big_nohaplotig	exon	1975815	1975941	98	+	.	Parent=FBgn0032105.1.mrna1;Target=FBgn0032105.1 265 391 +
Chr2	stalkie_big_nohaplotig	exon	1976150	1976549	100	+	.	Parent=FBgn0032105.1.mrna1;Target=FBgn0032105.1 392 791 +
Chr2	stalkie_big_nohaplotig	exon	1976618	1976804	100	+	.	Parent=FBgn0032105.1.mrna1;Target=FBgn0032105.1 792 978 +
Chr2	stalkie_big_nohaplotig	CDS	1975487	1975750	.	+	0	Parent=FBgn0032105.1.mrna1;Target=FBgn0032105.1 1 264 +
Chr2	stalkie_big_nohaplotig	CDS	1975815	1975941	.	+	0	Parent=FBgn0032105.1.mrna1;Target=FBgn0032105.1 265 391 +
Chr2	stalkie_big_nohaplotig	CDS	1976150	1976549	.	+	2	Parent=FBgn0032105.1.mrna1;Target=FBgn0032105.1 392 791 +
Chr2	stalkie_big_nohaplotig	CDS	1976618	1976804	.	+	1	Parent=FBgn0032105.1.mrna1;Target=FBgn0032105.1 792 978 +
Chr2	gffcl	locus	1981822	1986801	.	.	.	ID=RLOC_00014036;geneIDs=comp157172_c1_seq1.path1,comp161551_c0_seq1.path1;transcripts=comp161551_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1981822	1985435	.	+	.	ID=comp161551_c0_seq1.mrna1;geneID=comp161551_c0_seq1.path1;Name=comp161551_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=3602;mismatches=12;indels=13;unknowns=0;Target=comp161551_c0_seq1 3627 1 .;CDS_Target=comp161551_c0_seq1 2851 2702 .;locus=RLOC_00014036
Chr2	stalkie_big_nohaplotig	exon	1981822	1985435	99	+	.	Parent=comp161551_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	1984510	1984659	.	+	0	Parent=comp161551_c0_seq1.mrna1
Chr2	gffcl	locus	1987648	1991309	.	-	.	ID=RLOC_00014037;geneIDs=comp161383_c0_seq1.path1;transcripts=comp161383_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1987648	1991309	.	-	.	ID=comp161383_c0_seq1.mrna1;geneID=comp161383_c0_seq1.path1;Name=comp161383_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.3;matches=3645;mismatches=11;indels=13;unknowns=0;Target=comp161383_c0_seq1 3675 13 .;CDS_Target=comp161383_c0_seq1 874 695 .;locus=RLOC_00014037
Chr2	stalkie_big_nohaplotig	exon	1987648	1991309	99	-	.	Parent=comp161383_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	1990449	1990628	.	-	0	Parent=comp161383_c0_seq1.mrna1
Chr2	gffcl	locus	1993318	2006961	.	.	.	ID=RLOC_00014038;geneIDs=FBgn0050481.1.path1,FBgn0053155.1.path1,FBgn0262739.1.path1,comp145007_c0_seq1.path1;transcripts=FBgn0262739.1.mrna1,FBgn0050481.1.mrna1,comp145007_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	1993318	2006228	.	-	.	ID=FBgn0262739.1.mrna1;geneID=FBgn0262739.1.path1;Name=FBgn0262739.1;Dir=sensecoverage=99.5;identity=99.6;matches=2530;mismatches=10;indels=0;unknowns=19;locus=RLOC_00014038
Chr2	stalkie_big_nohaplotig	exon	1993318	1993895	99	-	.	Parent=FBgn0262739.1.mrna1;Target=FBgn0262739.1 1982 2559 +
Chr2	stalkie_big_nohaplotig	exon	1993960	1994299	99	-	.	Parent=FBgn0262739.1.mrna1;Target=FBgn0262739.1 1642 1981 +
Chr2	stalkie_big_nohaplotig	exon	1994410	1994821	99	-	.	Parent=FBgn0262739.1.mrna1;Target=FBgn0262739.1 1230 1641 +
Chr2	stalkie_big_nohaplotig	exon	1994897	1995119	100	-	.	Parent=FBgn0262739.1.mrna1;Target=FBgn0262739.1 1007 1229 +
Chr2	stalkie_big_nohaplotig	exon	1995193	1995969	99	-	.	Parent=FBgn0262739.1.mrna1;Target=FBgn0262739.1 230 1006 +
Chr2	stalkie_big_nohaplotig	exon	1997252	1997326	100	-	.	Parent=FBgn0262739.1.mrna1;Target=FBgn0262739.1 155 229 +
Chr2	stalkie_big_nohaplotig	exon	2006075	2006228	99	-	.	Parent=FBgn0262739.1.mrna1;Target=FBgn0262739.1 1 154 +
Chr2	stalkie_big_nohaplotig	CDS	1993318	1993895	.	-	2	Parent=FBgn0262739.1.mrna1;Target=FBgn0262739.1 1982 2559 +
Chr2	stalkie_big_nohaplotig	CDS	1993960	1994299	.	-	0	Parent=FBgn0262739.1.mrna1;Target=FBgn0262739.1 1642 1981 +
Chr2	stalkie_big_nohaplotig	CDS	1994410	1994821	.	-	1	Parent=FBgn0262739.1.mrna1;Target=FBgn0262739.1 1230 1641 +
Chr2	stalkie_big_nohaplotig	CDS	1994897	1995119	.	-	2	Parent=FBgn0262739.1.mrna1;Target=FBgn0262739.1 1007 1229 +
Chr2	stalkie_big_nohaplotig	CDS	1995193	1995969	.	-	2	Parent=FBgn0262739.1.mrna1;Target=FBgn0262739.1 230 1006 +
Chr2	stalkie_big_nohaplotig	CDS	1997252	1997326	.	-	2	Parent=FBgn0262739.1.mrna1;Target=FBgn0262739.1 155 229 +
Chr2	stalkie_big_nohaplotig	CDS	2006075	2006228	.	-	0	Parent=FBgn0262739.1.mrna1;Target=FBgn0262739.1 1 154 +
Chr2	stalkie_big_nohaplotig	mRNA	2005633	2006741	.	+	.	ID=FBgn0050481.1.mrna1;geneID=FBgn0050481.1.path1;Name=FBgn0050481.1;Dir=sensecoverage=100.0;identity=99.6;matches=478;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014038
Chr2	stalkie_big_nohaplotig	exon	2005633	2005802	100	+	.	Parent=FBgn0050481.1.mrna1;Target=FBgn0050481.1 1 170 +
Chr2	stalkie_big_nohaplotig	exon	2006366	2006493	99	+	.	Parent=FBgn0050481.1.mrna1;Target=FBgn0050481.1 171 298 +
Chr2	stalkie_big_nohaplotig	exon	2006560	2006741	99	+	.	Parent=FBgn0050481.1.mrna1;Target=FBgn0050481.1 299 480 +
Chr2	stalkie_big_nohaplotig	CDS	2005633	2005802	.	+	0	Parent=FBgn0050481.1.mrna1;Target=FBgn0050481.1 1 170 +
Chr2	stalkie_big_nohaplotig	CDS	2006366	2006493	.	+	1	Parent=FBgn0050481.1.mrna1;Target=FBgn0050481.1 171 298 +
Chr2	stalkie_big_nohaplotig	CDS	2006560	2006741	.	+	2	Parent=FBgn0050481.1.mrna1;Target=FBgn0050481.1 299 480 +
Chr2	stalkie_big_nohaplotig	mRNA	2005780	2006097	.	-	.	ID=comp145007_c0_seq1.mrna1;geneID=comp145007_c0_seq1.path1;Name=comp145007_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=317;mismatches=1;indels=0;unknowns=0;Target=comp145007_c0_seq1 318 1 .;CDS_Target=comp145007_c0_seq1 303 169 .;locus=RLOC_00014038
Chr2	stalkie_big_nohaplotig	exon	2005780	2006097	99	-	.	Parent=comp145007_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2005795	2005929	.	-	0	Parent=comp145007_c0_seq1.mrna1
Chr2	gffcl	locus	2022743	2023759	.	-	.	ID=RLOC_00014039;geneIDs=comp151890_c0_seq1.path1;transcripts=comp151890_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2022743	2023759	.	-	.	ID=comp151890_c0_seq1.mrna1;geneID=comp151890_c0_seq1.path1;Name=comp151890_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1009;mismatches=8;indels=0;unknowns=0;Target=comp151890_c0_seq1 1017 1 .;CDS_Target=comp151890_c0_seq1 195 1 .;locus=RLOC_00014039
Chr2	stalkie_big_nohaplotig	exon	2022743	2023759	99	-	.	Parent=comp151890_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2023565	2023759	.	-	0	Parent=comp151890_c0_seq1.mrna1
Chr2	gffcl	locus	2028973	2029675	.	+	.	ID=RLOC_00014040;geneIDs=comp154865_c0_seq1.path1;transcripts=comp154865_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2028973	2029675	.	+	.	ID=comp154865_c0_seq1.mrna1;geneID=comp154865_c0_seq1.path1;Name=comp154865_c0_seq1;Dir=indeterminatecoverage=99.9;identity=94.9;matches=690;mismatches=13;indels=24;unknowns=0;Target=comp154865_c0_seq1 727 1 .;CDS_Target=comp154865_c0_seq1 170 3 .;locus=RLOC_00014040
Chr2	stalkie_big_nohaplotig	exon	2028973	2029675	94	+	.	Parent=comp154865_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2028975	2029121	.	+	0	Parent=comp154865_c0_seq1.mrna1
Chr2	gffcl	locus	2030154	2031560	.	+	.	ID=RLOC_00014041;geneIDs=FBgn0034181.1.path1;transcripts=FBgn0034181.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2030154	2031560	.	+	.	ID=FBgn0034181.1.mrna1;geneID=FBgn0034181.1.path1;Name=FBgn0034181.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1404;mismatches=3;indels=0;unknowns=0;Target=FBgn0034181.1 1407 1 .;locus=RLOC_00014041
Chr2	stalkie_big_nohaplotig	exon	2030154	2031560	99	+	.	Parent=FBgn0034181.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2030154	2031560	.	+	0	Parent=FBgn0034181.1.mrna1
Chr2	gffcl	locus	2079985	2080752	.	+	.	ID=RLOC_00014042;geneIDs=comp151233_c0_seq1.path1;transcripts=comp151233_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2079985	2080752	.	+	.	ID=comp151233_c0_seq1.mrna1;geneID=comp151233_c0_seq1.path1;Name=comp151233_c0_seq1;Dir=indeterminatecoverage=99.3;identity=98.6;matches=759;mismatches=2;indels=9;unknowns=0;Target=comp151233_c0_seq1 767 5 .;CDS_Target=comp151233_c0_seq1 186 91 .;locus=RLOC_00014042
Chr2	stalkie_big_nohaplotig	exon	2079985	2080752	98	+	.	Parent=comp151233_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2080071	2080164	.	+	0	Parent=comp151233_c0_seq1.mrna1
Chr2	gffcl	locus	2081488	2082258	.	-	.	ID=RLOC_00014043;geneIDs=comp152946_c0_seq1.path1;transcripts=comp152946_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2081488	2082258	.	-	.	ID=comp152946_c0_seq1.mrna1;geneID=comp152946_c0_seq1.path1;Name=comp152946_c0_seq1;Dir=indeterminatecoverage=98.1;identity=99.9;matches=770;mismatches=1;indels=0;unknowns=0;Target=comp152946_c0_seq1 771 1 .;CDS_Target=comp152946_c0_seq1 520 428 .;locus=RLOC_00014043
Chr2	stalkie_big_nohaplotig	exon	2081488	2082258	99	-	.	Parent=comp152946_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2081739	2081831	.	-	0	Parent=comp152946_c0_seq1.mrna1
Chr2	gffcl	locus	2082610	2090126	.	+	.	ID=RLOC_00014044;geneIDs=comp162569_c0_seq1.path1;transcripts=comp162569_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2082610	2090126	.	+	.	ID=comp162569_c0_seq1.mrna1;geneID=comp162569_c0_seq1.path1;Name=comp162569_c0_seq1;Dir=sensecoverage=99.7;identity=97.3;matches=2238;mismatches=22;indels=40;unknowns=0;Target=comp162569_c0_seq1 109 558 +;locus=RLOC_00014044
Chr2	stalkie_big_nohaplotig	exon	2082610	2083339	99	+	.	Parent=comp162569_c0_seq1.mrna1;Target=comp162569_c0_seq1 7 736 +
Chr2	stalkie_big_nohaplotig	exon	2083536	2084061	99	+	.	Parent=comp162569_c0_seq1.mrna1;Target=comp162569_c0_seq1 737 1262 +
Chr2	stalkie_big_nohaplotig	exon	2084119	2084378	90	+	.	Parent=comp162569_c0_seq1.mrna1;Target=comp162569_c0_seq1 1263 1536 +
Chr2	stalkie_big_nohaplotig	exon	2089043	2089234	98	+	.	Parent=comp162569_c0_seq1.mrna1;Target=comp162569_c0_seq1 1537 1728 +
Chr2	stalkie_big_nohaplotig	exon	2089559	2090126	94	+	.	Parent=comp162569_c0_seq1.mrna1;Target=comp162569_c0_seq1 1729 2290 +
Chr2	stalkie_big_nohaplotig	CDS	2082712	2083161	.	+	0	Parent=comp162569_c0_seq1.mrna1
Chr2	gffcl	locus	2097616	2097945	.	+	.	ID=RLOC_00014045;geneIDs=comp144352_c0_seq1.path1;transcripts=comp144352_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2097616	2097945	.	+	.	ID=comp144352_c0_seq1.mrna1;geneID=comp144352_c0_seq1.path1;Name=comp144352_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=329;mismatches=1;indels=0;unknowns=0;Target=comp144352_c0_seq1 330 1 .;CDS_Target=comp144352_c0_seq1 329 117 .;locus=RLOC_00014045
Chr2	stalkie_big_nohaplotig	exon	2097616	2097945	99	+	.	Parent=comp144352_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2097732	2097944	.	+	0	Parent=comp144352_c0_seq1.mrna1
Chr2	gffcl	locus	2102629	2103432	.	+	.	ID=RLOC_00014046;geneIDs=FBgn0004003.1.path1;transcripts=FBgn0004003.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2102629	2103432	.	+	.	ID=FBgn0004003.1.mrna1;geneID=FBgn0004003.1.path1;Name=FBgn0004003.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=804;mismatches=0;indels=0;unknowns=0;Target=FBgn0004003.1 804 1 .;locus=RLOC_00014046
Chr2	stalkie_big_nohaplotig	exon	2102629	2103432	100	+	.	Parent=FBgn0004003.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2102629	2103432	.	+	0	Parent=FBgn0004003.1.mrna1
Chr2	gffcl	locus	2118239	2119042	.	-	.	ID=RLOC_00014047;geneIDs=comp140949_c0_seq1.path1;transcripts=comp140949_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2118239	2119042	.	-	.	ID=comp140949_c0_seq1.mrna1;geneID=comp140949_c0_seq1.path1;Name=comp140949_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=779;mismatches=3;indels=22;unknowns=0;Target=comp140949_c0_seq1 782 1 .;CDS_Target=comp140949_c0_seq1 188 3 .;locus=RLOC_00014047
Chr2	stalkie_big_nohaplotig	exon	2118239	2119042	96	-	.	Parent=comp140949_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2118855	2119040	.	-	0	Parent=comp140949_c0_seq1.mrna1
Chr2	gffcl	locus	2182194	2186238	.	+	.	ID=RLOC_00014048;geneIDs=FBgn0003254.1.path1;transcripts=FBgn0003254.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2182194	2186238	.	+	.	ID=FBgn0003254.1.mrna1;geneID=FBgn0003254.1.path1;Name=FBgn0003254.1;Dir=sensecoverage=100.0;identity=99.0;matches=2442;mismatches=12;indels=12;unknowns=0;locus=RLOC_00014048
Chr2	stalkie_big_nohaplotig	exon	2182194	2182336	99	+	.	Parent=FBgn0003254.1.mrna1;Target=FBgn0003254.1 1 143 +
Chr2	stalkie_big_nohaplotig	exon	2183839	2185111	99	+	.	Parent=FBgn0003254.1.mrna1;Target=FBgn0003254.1 144 1416 +
Chr2	stalkie_big_nohaplotig	exon	2185195	2186238	98	+	.	Parent=FBgn0003254.1.mrna1;Target=FBgn0003254.1 1417 2460 +
Chr2	stalkie_big_nohaplotig	CDS	2182194	2182336	.	+	0	Parent=FBgn0003254.1.mrna1;Target=FBgn0003254.1 1 143 +
Chr2	stalkie_big_nohaplotig	CDS	2183839	2185111	.	+	1	Parent=FBgn0003254.1.mrna1;Target=FBgn0003254.1 144 1416 +
Chr2	stalkie_big_nohaplotig	CDS	2185195	2186238	.	+	0	Parent=FBgn0003254.1.mrna1;Target=FBgn0003254.1 1417 2460 +
Chr2	gffcl	locus	2197961	2199353	.	+	.	ID=RLOC_00014049;geneIDs=comp161400_c1_seq1.path1;transcripts=comp161400_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2197961	2199353	.	+	.	ID=comp161400_c1_seq1.mrna1;geneID=comp161400_c1_seq1.path1;Name=comp161400_c1_seq1;Dir=indeterminatecoverage=56.5;identity=98.5;matches=1373;mismatches=14;indels=7;unknowns=0;Target=comp161400_c1_seq1 2441 1054 .;CDS_Target=comp161400_c1_seq1 1387 1274 .;locus=RLOC_00014049
Chr2	stalkie_big_nohaplotig	exon	2197961	2199353	98	+	.	Parent=comp161400_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2198181	2198294	.	+	0	Parent=comp161400_c1_seq1.mrna1
Chr2	gffcl	locus	2202569	2207448	.	+	.	ID=RLOC_00014050;geneIDs=FBgn0086784.1.path1,comp96989_c0_seq1.path1;transcripts=FBgn0086784.1.mrna1,comp96989_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2202569	2207448	.	+	.	ID=FBgn0086784.1.mrna1;geneID=FBgn0086784.1.path1;Name=FBgn0086784.1;Dir=sensecoverage=100.0;identity=99.8;matches=2396;mismatches=4;indels=0;unknowns=0;locus=RLOC_00014050
Chr2	stalkie_big_nohaplotig	exon	2202569	2202596	100	+	.	Parent=FBgn0086784.1.mrna1;Target=FBgn0086784.1 1 28 +
Chr2	stalkie_big_nohaplotig	exon	2203450	2203654	100	+	.	Parent=FBgn0086784.1.mrna1;Target=FBgn0086784.1 29 233 +
Chr2	stalkie_big_nohaplotig	exon	2203719	2203869	100	+	.	Parent=FBgn0086784.1.mrna1;Target=FBgn0086784.1 234 384 +
Chr2	stalkie_big_nohaplotig	exon	2204839	2205090	99	+	.	Parent=FBgn0086784.1.mrna1;Target=FBgn0086784.1 385 636 +
Chr2	stalkie_big_nohaplotig	exon	2205405	2205535	100	+	.	Parent=FBgn0086784.1.mrna1;Target=FBgn0086784.1 637 767 +
Chr2	stalkie_big_nohaplotig	exon	2205598	2206461	100	+	.	Parent=FBgn0086784.1.mrna1;Target=FBgn0086784.1 768 1631 +
Chr2	stalkie_big_nohaplotig	exon	2206605	2207226	100	+	.	Parent=FBgn0086784.1.mrna1;Target=FBgn0086784.1 1632 2253 +
Chr2	stalkie_big_nohaplotig	exon	2207302	2207448	98	+	.	Parent=FBgn0086784.1.mrna1;Target=FBgn0086784.1 2254 2400 +
Chr2	stalkie_big_nohaplotig	CDS	2202569	2202596	.	+	0	Parent=FBgn0086784.1.mrna1;Target=FBgn0086784.1 1 28 +
Chr2	stalkie_big_nohaplotig	CDS	2203450	2203654	.	+	2	Parent=FBgn0086784.1.mrna1;Target=FBgn0086784.1 29 233 +
Chr2	stalkie_big_nohaplotig	CDS	2203719	2203869	.	+	1	Parent=FBgn0086784.1.mrna1;Target=FBgn0086784.1 234 384 +
Chr2	stalkie_big_nohaplotig	CDS	2204839	2205090	.	+	0	Parent=FBgn0086784.1.mrna1;Target=FBgn0086784.1 385 636 +
Chr2	stalkie_big_nohaplotig	CDS	2205405	2205535	.	+	0	Parent=FBgn0086784.1.mrna1;Target=FBgn0086784.1 637 767 +
Chr2	stalkie_big_nohaplotig	CDS	2205598	2206461	.	+	1	Parent=FBgn0086784.1.mrna1;Target=FBgn0086784.1 768 1631 +
Chr2	stalkie_big_nohaplotig	CDS	2206605	2207226	.	+	1	Parent=FBgn0086784.1.mrna1;Target=FBgn0086784.1 1632 2253 +
Chr2	stalkie_big_nohaplotig	CDS	2207302	2207448	.	+	0	Parent=FBgn0086784.1.mrna1;Target=FBgn0086784.1 2254 2400 +
Chr2	stalkie_big_nohaplotig	mRNA	2203019	2203472	.	+	.	ID=comp96989_c0_seq1.mrna1;geneID=comp96989_c0_seq1.path1;Name=comp96989_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=454;mismatches=0;indels=0;unknowns=0;Target=comp96989_c0_seq1 454 1 .;CDS_Target=comp96989_c0_seq1 454 335 .;locus=RLOC_00014050
Chr2	stalkie_big_nohaplotig	exon	2203019	2203472	100	+	.	Parent=comp96989_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2203353	2203472	.	+	0	Parent=comp96989_c0_seq1.mrna1
Chr2	gffcl	locus	2227000	2227464	.	-	.	ID=RLOC_00014052;geneIDs=comp137742_c1_seq1.path1;transcripts=comp137742_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2227000	2227464	.	-	.	ID=comp137742_c1_seq1.mrna1;geneID=comp137742_c1_seq1.path1;Name=comp137742_c1_seq1;Dir=sensecoverage=100.0;identity=98.3;matches=354;mismatches=6;indels=0;unknowns=0;Target=comp137742_c1_seq1 3 92 +;locus=RLOC_00014052
Chr2	stalkie_big_nohaplotig	exon	2227000	2227106	96	-	.	Parent=comp137742_c1_seq1.mrna1;Target=comp137742_c1_seq1 254 360 +
Chr2	stalkie_big_nohaplotig	exon	2227212	2227464	99	-	.	Parent=comp137742_c1_seq1.mrna1;Target=comp137742_c1_seq1 1 253 +
Chr2	stalkie_big_nohaplotig	CDS	2227373	2227462	.	-	0	Parent=comp137742_c1_seq1.mrna1
Chr2	gffcl	locus	2233993	2235145	.	+	.	ID=RLOC_00014053;geneIDs=FBgn0033886.1.path1;transcripts=FBgn0033886.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2233993	2235145	.	+	.	ID=FBgn0033886.1.mrna1;geneID=FBgn0033886.1.path1;Name=FBgn0033886.1;Dir=sensecoverage=99.5;identity=99.5;matches=959;mismatches=4;indels=1;unknowns=0;locus=RLOC_00014053
Chr2	stalkie_big_nohaplotig	exon	2233993	2234203	99	+	.	Parent=FBgn0033886.1.mrna1;Target=FBgn0033886.1 6 216 +
Chr2	stalkie_big_nohaplotig	exon	2234264	2234589	99	+	.	Parent=FBgn0033886.1.mrna1;Target=FBgn0033886.1 217 542 +
Chr2	stalkie_big_nohaplotig	exon	2234651	2234826	100	+	.	Parent=FBgn0033886.1.mrna1;Target=FBgn0033886.1 543 718 +
Chr2	stalkie_big_nohaplotig	exon	2234896	2235145	99	+	.	Parent=FBgn0033886.1.mrna1;Target=FBgn0033886.1 719 969 +
Chr2	stalkie_big_nohaplotig	CDS	2233994	2234203	.	+	0	Parent=FBgn0033886.1.mrna1;Target=FBgn0033886.1 7 216 +
Chr2	stalkie_big_nohaplotig	CDS	2234264	2234589	.	+	0	Parent=FBgn0033886.1.mrna1;Target=FBgn0033886.1 217 542 +
Chr2	stalkie_big_nohaplotig	CDS	2234651	2234826	.	+	1	Parent=FBgn0033886.1.mrna1;Target=FBgn0033886.1 543 718 +
Chr2	stalkie_big_nohaplotig	CDS	2234896	2235145	.	+	2	Parent=FBgn0033886.1.mrna1;Target=FBgn0033886.1 719 969 +
Chr2	gffcl	locus	2235936	2236706	.	-	.	ID=RLOC_00014054;geneIDs=FBgn0034430.1.path1;transcripts=FBgn0034430.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2235936	2236706	.	-	.	ID=FBgn0034430.1.mrna1;geneID=FBgn0034430.1.path1;Name=FBgn0034430.1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=762;mismatches=9;indels=0;unknowns=0;Target=FBgn0034430.1 771 1 .;locus=RLOC_00014054
Chr2	stalkie_big_nohaplotig	exon	2235936	2236706	98	-	.	Parent=FBgn0034430.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2235936	2236706	.	-	0	Parent=FBgn0034430.1.mrna1
Chr2	gffcl	locus	2240075	2242309	.	-	.	ID=RLOC_00014055;geneIDs=FBgn0034704.1.path1;transcripts=FBgn0034704.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2240075	2242309	.	-	.	ID=FBgn0034704.1.mrna1;geneID=FBgn0034704.1.path1;Name=FBgn0034704.1;Dir=sensecoverage=100.0;identity=100.0;matches=2084;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014055
Chr2	stalkie_big_nohaplotig	exon	2240075	2240500	100	-	.	Parent=FBgn0034704.1.mrna1;Target=FBgn0034704.1 1660 2085 +
Chr2	stalkie_big_nohaplotig	exon	2240581	2242016	99	-	.	Parent=FBgn0034704.1.mrna1;Target=FBgn0034704.1 224 1659 +
Chr2	stalkie_big_nohaplotig	exon	2242087	2242309	100	-	.	Parent=FBgn0034704.1.mrna1;Target=FBgn0034704.1 1 223 +
Chr2	stalkie_big_nohaplotig	CDS	2240075	2240500	.	-	0	Parent=FBgn0034704.1.mrna1;Target=FBgn0034704.1 1660 2085 +
Chr2	stalkie_big_nohaplotig	CDS	2240581	2242016	.	-	2	Parent=FBgn0034704.1.mrna1;Target=FBgn0034704.1 224 1659 +
Chr2	stalkie_big_nohaplotig	CDS	2242087	2242309	.	-	0	Parent=FBgn0034704.1.mrna1;Target=FBgn0034704.1 1 223 +
Chr2	gffcl	locus	2245022	2245465	.	-	.	ID=RLOC_00014056;geneIDs=FBgn0013954.1.path1;transcripts=FBgn0013954.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2245022	2245465	.	-	.	ID=FBgn0013954.1.mrna1;geneID=FBgn0013954.1.path1;Name=FBgn0013954.1;Dir=sensecoverage=100.0;identity=100.0;matches=345;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014056
Chr2	stalkie_big_nohaplotig	exon	2245022	2245317	100	-	.	Parent=FBgn0013954.1.mrna1;Target=FBgn0013954.1 50 345 +
Chr2	stalkie_big_nohaplotig	exon	2245417	2245465	100	-	.	Parent=FBgn0013954.1.mrna1;Target=FBgn0013954.1 1 49 +
Chr2	stalkie_big_nohaplotig	CDS	2245022	2245317	.	-	2	Parent=FBgn0013954.1.mrna1;Target=FBgn0013954.1 50 345 +
Chr2	stalkie_big_nohaplotig	CDS	2245417	2245465	.	-	0	Parent=FBgn0013954.1.mrna1;Target=FBgn0013954.1 1 49 +
Chr2	gffcl	locus	2250644	2253482	.	-	.	ID=RLOC_00014057;geneIDs=FBgn0034425.1.path1;transcripts=FBgn0034425.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2250644	2253482	.	-	.	ID=FBgn0034425.1.mrna1;geneID=FBgn0034425.1.path1;Name=FBgn0034425.1;Dir=sensecoverage=100.0;identity=99.9;matches=2217;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014057
Chr2	stalkie_big_nohaplotig	exon	2250644	2251076	100	-	.	Parent=FBgn0034425.1.mrna1;Target=FBgn0034425.1 1788 2220 +
Chr2	stalkie_big_nohaplotig	exon	2251527	2251704	99	-	.	Parent=FBgn0034425.1.mrna1;Target=FBgn0034425.1 1610 1787 +
Chr2	stalkie_big_nohaplotig	exon	2251759	2252080	100	-	.	Parent=FBgn0034425.1.mrna1;Target=FBgn0034425.1 1288 1609 +
Chr2	stalkie_big_nohaplotig	exon	2252139	2253077	99	-	.	Parent=FBgn0034425.1.mrna1;Target=FBgn0034425.1 349 1287 +
Chr2	stalkie_big_nohaplotig	exon	2253135	2253482	99	-	.	Parent=FBgn0034425.1.mrna1;Target=FBgn0034425.1 1 348 +
Chr2	stalkie_big_nohaplotig	CDS	2250644	2251076	.	-	1	Parent=FBgn0034425.1.mrna1;Target=FBgn0034425.1 1788 2220 +
Chr2	stalkie_big_nohaplotig	CDS	2251527	2251704	.	-	2	Parent=FBgn0034425.1.mrna1;Target=FBgn0034425.1 1610 1787 +
Chr2	stalkie_big_nohaplotig	CDS	2251759	2252080	.	-	0	Parent=FBgn0034425.1.mrna1;Target=FBgn0034425.1 1288 1609 +
Chr2	stalkie_big_nohaplotig	CDS	2252139	2253077	.	-	0	Parent=FBgn0034425.1.mrna1;Target=FBgn0034425.1 349 1287 +
Chr2	stalkie_big_nohaplotig	CDS	2253135	2253482	.	-	0	Parent=FBgn0034425.1.mrna1;Target=FBgn0034425.1 1 348 +
Chr2	gffcl	locus	2255918	2256826	.	-	.	ID=RLOC_00014058;geneIDs=FBgn0262534.1.path1;transcripts=FBgn0262534.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2255918	2256826	.	-	.	ID=FBgn0262534.1.mrna1;geneID=FBgn0262534.1.path1;Name=FBgn0262534.1;Dir=sensecoverage=98.6;identity=99.1;matches=792;mismatches=7;indels=0;unknowns=0;locus=RLOC_00014058
Chr2	stalkie_big_nohaplotig	exon	2255918	2256092	99	-	.	Parent=FBgn0262534.1.mrna1;Target=FBgn0262534.1 626 800 +
Chr2	stalkie_big_nohaplotig	exon	2256146	2256361	99	-	.	Parent=FBgn0262534.1.mrna1;Target=FBgn0262534.1 410 625 +
Chr2	stalkie_big_nohaplotig	exon	2256419	2256826	99	-	.	Parent=FBgn0262534.1.mrna1;Target=FBgn0262534.1 2 409 +
Chr2	stalkie_big_nohaplotig	CDS	2255920	2256092	.	-	2	Parent=FBgn0262534.1.mrna1;Target=FBgn0262534.1 626 798 +
Chr2	stalkie_big_nohaplotig	CDS	2256146	2256361	.	-	2	Parent=FBgn0262534.1.mrna1;Target=FBgn0262534.1 410 625 +
Chr2	stalkie_big_nohaplotig	CDS	2256419	2256824	.	-	0	Parent=FBgn0262534.1.mrna1;Target=FBgn0262534.1 4 409 +
Chr2	gffcl	locus	2267421	2309237	.	+	.	ID=RLOC_00014059;geneIDs=comp155456_c1_seq1.path1;transcripts=comp155456_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2267421	2309237	.	+	.	ID=comp155456_c1_seq1.mrna1;geneID=comp155456_c1_seq1.path1;Name=comp155456_c1_seq1;Dir=sensecoverage=98.0;identity=99.7;matches=1152;mismatches=2;indels=2;unknowns=0;Target=comp155456_c1_seq1 958 1155 +;locus=RLOC_00014059
Chr2	stalkie_big_nohaplotig	exon	2267421	2268015	99	+	.	Parent=comp155456_c1_seq1.mrna1;Target=comp155456_c1_seq1 1 596 +
Chr2	stalkie_big_nohaplotig	exon	2308679	2309237	99	+	.	Parent=comp155456_c1_seq1.mrna1;Target=comp155456_c1_seq1 597 1156 +
Chr2	stalkie_big_nohaplotig	CDS	2309039	2309236	.	+	0	Parent=comp155456_c1_seq1.mrna1
Chr2	gffcl	locus	2289921	2290703	.	-	.	ID=RLOC_00014060;geneIDs=comp148463_c0_seq1.path1;transcripts=comp148463_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2289921	2290703	.	-	.	ID=comp148463_c0_seq1.mrna1;geneID=comp148463_c0_seq1.path1;Name=comp148463_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=780;mismatches=3;indels=0;unknowns=0;Target=comp148463_c0_seq1 783 1 .;CDS_Target=comp148463_c0_seq1 445 263 .;locus=RLOC_00014060
Chr2	stalkie_big_nohaplotig	exon	2289921	2290703	99	-	.	Parent=comp148463_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2290259	2290441	.	-	0	Parent=comp148463_c0_seq1.mrna1
Chr2	gffcl	locus	2295916	2296748	.	+	.	ID=RLOC_00014061;geneIDs=comp146740_c0_seq1.path1;transcripts=comp146740_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2295916	2296748	.	+	.	ID=comp146740_c0_seq1.mrna1;geneID=comp146740_c0_seq1.path1;Name=comp146740_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.4;matches=828;mismatches=5;indels=0;unknowns=0;Target=comp146740_c0_seq1 833 1 .;CDS_Target=comp146740_c0_seq1 699 565 .;locus=RLOC_00014061
Chr2	stalkie_big_nohaplotig	exon	2295916	2296748	99	+	.	Parent=comp146740_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2296480	2296614	.	+	0	Parent=comp146740_c0_seq1.mrna1
Chr2	gffcl	locus	2321569	2321898	.	-	.	ID=RLOC_00014062;geneIDs=FBgn0000028.1.path1;transcripts=FBgn0000028.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2321569	2321898	.	-	.	ID=FBgn0000028.1.mrna1;geneID=FBgn0000028.1.path1;Name=FBgn0000028.1;Dir=sensecoverage=26.4;identity=100.0;matches=205;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014062
Chr2	stalkie_big_nohaplotig	exon	2321569	2321610	100	-	.	Parent=FBgn0000028.1.mrna1;Target=FBgn0000028.1 188 229 +
Chr2	stalkie_big_nohaplotig	exon	2321736	2321898	100	-	.	Parent=FBgn0000028.1.mrna1;Target=FBgn0000028.1 25 187 +
Chr2	stalkie_big_nohaplotig	CDS	2321569	2321610	.	-	2	Parent=FBgn0000028.1.mrna1;Target=FBgn0000028.1 188 229 +
Chr2	stalkie_big_nohaplotig	CDS	2321736	2321898	.	-	0	Parent=FBgn0000028.1.mrna1;Target=FBgn0000028.1 25 187 +
Chr2	gffcl	locus	2375266	2375600	.	+	.	ID=RLOC_00014063;geneIDs=comp86393_c0_seq1.path1;transcripts=comp86393_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2375266	2375600	.	+	.	ID=comp86393_c0_seq1.mrna1;geneID=comp86393_c0_seq1.path1;Name=comp86393_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=335;mismatches=0;indels=0;unknowns=0;Target=comp86393_c0_seq1 335 1 .;CDS_Target=comp86393_c0_seq1 47 3 .;locus=RLOC_00014063
Chr2	stalkie_big_nohaplotig	exon	2375266	2375600	100	+	.	Parent=comp86393_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2375268	2375312	.	+	0	Parent=comp86393_c0_seq1.mrna1
Chr2	gffcl	locus	2396544	2410832	.	+	.	ID=RLOC_00014064;geneIDs=FBgn0027585.1.path1;transcripts=FBgn0027585.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2396544	2410832	.	+	.	ID=FBgn0027585.1.mrna1;geneID=FBgn0027585.1.path1;Name=FBgn0027585.1;Dir=sensecoverage=99.7;identity=99.8;matches=2931;mismatches=4;indels=1;unknowns=0;locus=RLOC_00014064
Chr2	stalkie_big_nohaplotig	exon	2396544	2398824	99	+	.	Parent=FBgn0027585.1.mrna1;Target=FBgn0027585.1 11 2291 +
Chr2	stalkie_big_nohaplotig	exon	2399449	2399974	100	+	.	Parent=FBgn0027585.1.mrna1;Target=FBgn0027585.1 2292 2817 +
Chr2	stalkie_big_nohaplotig	exon	2410705	2410832	99	+	.	Parent=FBgn0027585.1.mrna1;Target=FBgn0027585.1 2818 2946 +
Chr2	stalkie_big_nohaplotig	CDS	2396546	2398824	.	+	0	Parent=FBgn0027585.1.mrna1;Target=FBgn0027585.1 13 2291 +
Chr2	stalkie_big_nohaplotig	CDS	2399449	2399974	.	+	1	Parent=FBgn0027585.1.mrna1;Target=FBgn0027585.1 2292 2817 +
Chr2	stalkie_big_nohaplotig	CDS	2410705	2410832	.	+	0	Parent=FBgn0027585.1.mrna1;Target=FBgn0027585.1 2818 2946 +
Chr2	gffcl	locus	2416656	2417046	.	-	.	ID=RLOC_00014065;geneIDs=comp144891_c0_seq1.path1;transcripts=comp144891_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2416656	2417046	.	-	.	ID=comp144891_c0_seq1.mrna1;geneID=comp144891_c0_seq1.path1;Name=comp144891_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.1;matches=372;mismatches=19;indels=0;unknowns=0;Target=comp144891_c0_seq1 391 1 .;CDS_Target=comp144891_c0_seq1 390 319 .;locus=RLOC_00014065
Chr2	stalkie_big_nohaplotig	exon	2416656	2417046	95	-	.	Parent=comp144891_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2416657	2416728	.	-	0	Parent=comp144891_c0_seq1.mrna1
Chr2	gffcl	locus	2417533	2435192	.	+	.	ID=RLOC_00014066;geneIDs=FBgn0034484.1.path1,comp156542_c0_seq1.path1;transcripts=comp156542_c0_seq1.mrna1,FBgn0034484.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2417533	2435192	.	+	.	ID=comp156542_c0_seq1.mrna1;geneID=comp156542_c0_seq1.path1;Name=comp156542_c0_seq1;Dir=antisensecoverage=100.0;identity=99.2;matches=2343;mismatches=13;indels=7;unknowns=0;locus=RLOC_00014066
Chr2	stalkie_big_nohaplotig	exon	2417533	2417918	100	+	.	Parent=comp156542_c0_seq1.mrna1;Target=comp156542_c0_seq1 1978 2363 -
Chr2	stalkie_big_nohaplotig	exon	2419116	2419261	100	+	.	Parent=comp156542_c0_seq1.mrna1;Target=comp156542_c0_seq1 1832 1977 -
Chr2	stalkie_big_nohaplotig	exon	2419316	2419564	100	+	.	Parent=comp156542_c0_seq1.mrna1;Target=comp156542_c0_seq1 1583 1831 -
Chr2	stalkie_big_nohaplotig	exon	2419626	2419970	100	+	.	Parent=comp156542_c0_seq1.mrna1;Target=comp156542_c0_seq1 1238 1582 -
Chr2	stalkie_big_nohaplotig	exon	2420029	2420298	97	+	.	Parent=comp156542_c0_seq1.mrna1;Target=comp156542_c0_seq1 968 1237 -
Chr2	stalkie_big_nohaplotig	exon	2420356	2420520	100	+	.	Parent=comp156542_c0_seq1.mrna1;Target=comp156542_c0_seq1 803 967 -
Chr2	stalkie_big_nohaplotig	exon	2420586	2420614	100	+	.	Parent=comp156542_c0_seq1.mrna1;Target=comp156542_c0_seq1 774 802 -
Chr2	stalkie_big_nohaplotig	exon	2434378	2434804	98	+	.	Parent=comp156542_c0_seq1.mrna1;Target=comp156542_c0_seq1 342 773 -
Chr2	stalkie_big_nohaplotig	exon	2434854	2435192	97	+	.	Parent=comp156542_c0_seq1.mrna1;Target=comp156542_c0_seq1 1 341 -
Chr2	stalkie_big_nohaplotig	CDS	2417843	2417918	.	+	0	Parent=comp156542_c0_seq1.mrna1;Target=comp156542_c0_seq1 1978 2053 .
Chr2	stalkie_big_nohaplotig	CDS	2419116	2419261	.	+	2	Parent=comp156542_c0_seq1.mrna1;Target=comp156542_c0_seq1 1832 1977 .
Chr2	stalkie_big_nohaplotig	CDS	2419316	2419564	.	+	0	Parent=comp156542_c0_seq1.mrna1;Target=comp156542_c0_seq1 1583 1831 .
Chr2	stalkie_big_nohaplotig	CDS	2419626	2419970	.	+	0	Parent=comp156542_c0_seq1.mrna1;Target=comp156542_c0_seq1 1238 1582 .
Chr2	stalkie_big_nohaplotig	CDS	2420029	2420298	.	+	0	Parent=comp156542_c0_seq1.mrna1;Target=comp156542_c0_seq1 968 1237 .
Chr2	stalkie_big_nohaplotig	CDS	2420356	2420520	.	+	0	Parent=comp156542_c0_seq1.mrna1;Target=comp156542_c0_seq1 803 967 .
Chr2	stalkie_big_nohaplotig	CDS	2420586	2420614	.	+	0	Parent=comp156542_c0_seq1.mrna1;Target=comp156542_c0_seq1 774 802 .
Chr2	stalkie_big_nohaplotig	CDS	2434378	2434627	.	+	1	Parent=comp156542_c0_seq1.mrna1;Target=comp156542_c0_seq1 524 773 .
Chr2	stalkie_big_nohaplotig	mRNA	2417822	2420861	.	+	.	ID=FBgn0034484.1.mrna1;geneID=FBgn0034484.1.path1;Name=FBgn0034484.1;Dir=sensecoverage=100.0;identity=99.5;matches=1541;mismatches=7;indels=0;unknowns=0;locus=RLOC_00014066
Chr2	stalkie_big_nohaplotig	exon	2417822	2417918	100	+	.	Parent=FBgn0034484.1.mrna1;Target=FBgn0034484.1 1 97 +
Chr2	stalkie_big_nohaplotig	exon	2419116	2419261	100	+	.	Parent=FBgn0034484.1.mrna1;Target=FBgn0034484.1 98 243 +
Chr2	stalkie_big_nohaplotig	exon	2419316	2419564	100	+	.	Parent=FBgn0034484.1.mrna1;Target=FBgn0034484.1 244 492 +
Chr2	stalkie_big_nohaplotig	exon	2419626	2419970	100	+	.	Parent=FBgn0034484.1.mrna1;Target=FBgn0034484.1 493 837 +
Chr2	stalkie_big_nohaplotig	exon	2420029	2420298	97	+	.	Parent=FBgn0034484.1.mrna1;Target=FBgn0034484.1 838 1107 +
Chr2	stalkie_big_nohaplotig	exon	2420356	2420520	100	+	.	Parent=FBgn0034484.1.mrna1;Target=FBgn0034484.1 1108 1272 +
Chr2	stalkie_big_nohaplotig	exon	2420586	2420861	99	+	.	Parent=FBgn0034484.1.mrna1;Target=FBgn0034484.1 1273 1548 +
Chr2	stalkie_big_nohaplotig	CDS	2417822	2417918	.	+	0	Parent=FBgn0034484.1.mrna1;Target=FBgn0034484.1 1 97 +
Chr2	stalkie_big_nohaplotig	CDS	2419116	2419261	.	+	2	Parent=FBgn0034484.1.mrna1;Target=FBgn0034484.1 98 243 +
Chr2	stalkie_big_nohaplotig	CDS	2419316	2419564	.	+	0	Parent=FBgn0034484.1.mrna1;Target=FBgn0034484.1 244 492 +
Chr2	stalkie_big_nohaplotig	CDS	2419626	2419970	.	+	0	Parent=FBgn0034484.1.mrna1;Target=FBgn0034484.1 493 837 +
Chr2	stalkie_big_nohaplotig	CDS	2420029	2420298	.	+	0	Parent=FBgn0034484.1.mrna1;Target=FBgn0034484.1 838 1107 +
Chr2	stalkie_big_nohaplotig	CDS	2420356	2420520	.	+	0	Parent=FBgn0034484.1.mrna1;Target=FBgn0034484.1 1108 1272 +
Chr2	stalkie_big_nohaplotig	CDS	2420586	2420861	.	+	0	Parent=FBgn0034484.1.mrna1;Target=FBgn0034484.1 1273 1548 +
Chr2	gffcl	locus	2422113	2423095	.	+	.	ID=RLOC_00014067;geneIDs=comp169106_c0_seq1.path1;transcripts=comp169106_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2422113	2423095	.	+	.	ID=comp169106_c0_seq1.mrna1;geneID=comp169106_c0_seq1.path1;Name=comp169106_c0_seq1;Dir=indeterminatecoverage=94.6;identity=99.6;matches=979;mismatches=4;indels=0;unknowns=0;Target=comp169106_c0_seq1 1017 35 .;CDS_Target=comp169106_c0_seq1 835 410 .;locus=RLOC_00014067
Chr2	stalkie_big_nohaplotig	exon	2422113	2423095	99	+	.	Parent=comp169106_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2422488	2422913	.	+	0	Parent=comp169106_c0_seq1.mrna1
Chr2	gffcl	locus	2435876	2436858	.	+	.	ID=RLOC_00014068;geneIDs=comp169106_c0_seq1.path2;transcripts=comp169106_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	2435876	2436858	.	+	.	ID=comp169106_c0_seq1.mrna2;geneID=comp169106_c0_seq1.path2;Name=comp169106_c0_seq1;Dir=indeterminatecoverage=94.6;identity=99.6;matches=979;mismatches=4;indels=0;unknowns=0;Target=comp169106_c0_seq1 1017 35 .;CDS_Target=comp169106_c0_seq1 835 410 .;locus=RLOC_00014068
Chr2	stalkie_big_nohaplotig	exon	2435876	2436858	99	+	.	Parent=comp169106_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	2436251	2436676	.	+	0	Parent=comp169106_c0_seq1.mrna2
Chr2	gffcl	locus	2438781	2439904	.	-	.	ID=RLOC_00014069;geneIDs=comp149523_c0_seq1.path1;transcripts=comp149523_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2438781	2439904	.	-	.	ID=comp149523_c0_seq1.mrna1;geneID=comp149523_c0_seq1.path1;Name=comp149523_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.0;matches=1101;mismatches=8;indels=15;unknowns=0;Target=comp149523_c0_seq1 1110 2 .;CDS_Target=comp149523_c0_seq1 151 74 .;locus=RLOC_00014069
Chr2	stalkie_big_nohaplotig	exon	2438781	2439904	97	-	.	Parent=comp149523_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2439740	2439832	.	-	0	Parent=comp149523_c0_seq1.mrna1
Chr2	gffcl	locus	2440498	2442346	.	+	.	ID=RLOC_00014070;geneIDs=FBgn0034485.1.path1;transcripts=FBgn0034485.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2440498	2442346	.	+	.	ID=FBgn0034485.1.mrna1;geneID=FBgn0034485.1.path1;Name=FBgn0034485.1;Dir=sensecoverage=100.0;identity=99.7;matches=1104;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014070
Chr2	stalkie_big_nohaplotig	exon	2440498	2440840	100	+	.	Parent=FBgn0034485.1.mrna1;Target=FBgn0034485.1 1 343 +
Chr2	stalkie_big_nohaplotig	exon	2440902	2441084	99	+	.	Parent=FBgn0034485.1.mrna1;Target=FBgn0034485.1 344 526 +
Chr2	stalkie_big_nohaplotig	exon	2441161	2441308	100	+	.	Parent=FBgn0034485.1.mrna1;Target=FBgn0034485.1 527 674 +
Chr2	stalkie_big_nohaplotig	exon	2441366	2441677	99	+	.	Parent=FBgn0034485.1.mrna1;Target=FBgn0034485.1 675 986 +
Chr2	stalkie_big_nohaplotig	exon	2442226	2442346	99	+	.	Parent=FBgn0034485.1.mrna1;Target=FBgn0034485.1 987 1107 +
Chr2	stalkie_big_nohaplotig	CDS	2440498	2440840	.	+	0	Parent=FBgn0034485.1.mrna1;Target=FBgn0034485.1 1 343 +
Chr2	stalkie_big_nohaplotig	CDS	2440902	2441084	.	+	2	Parent=FBgn0034485.1.mrna1;Target=FBgn0034485.1 344 526 +
Chr2	stalkie_big_nohaplotig	CDS	2441161	2441308	.	+	2	Parent=FBgn0034485.1.mrna1;Target=FBgn0034485.1 527 674 +
Chr2	stalkie_big_nohaplotig	CDS	2441366	2441677	.	+	1	Parent=FBgn0034485.1.mrna1;Target=FBgn0034485.1 675 986 +
Chr2	stalkie_big_nohaplotig	CDS	2442226	2442346	.	+	1	Parent=FBgn0034485.1.mrna1;Target=FBgn0034485.1 987 1107 +
Chr2	gffcl	locus	2447042	2447943	.	-	.	ID=RLOC_00014071;geneIDs=FBgn0034486.2.path1;transcripts=FBgn0034486.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2447042	2447943	.	-	.	ID=FBgn0034486.2.mrna1;geneID=FBgn0034486.2.path1;Name=FBgn0034486.2;Dir=sensecoverage=100.0;identity=99.7;matches=676;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014071
Chr2	stalkie_big_nohaplotig	exon	2447042	2447207	100	-	.	Parent=FBgn0034486.2.mrna1;Target=FBgn0034486.2 513 678 +
Chr2	stalkie_big_nohaplotig	exon	2447277	2447620	99	-	.	Parent=FBgn0034486.2.mrna1;Target=FBgn0034486.2 169 512 +
Chr2	stalkie_big_nohaplotig	exon	2447690	2447834	99	-	.	Parent=FBgn0034486.2.mrna1;Target=FBgn0034486.2 24 168 +
Chr2	stalkie_big_nohaplotig	exon	2447921	2447943	100	-	.	Parent=FBgn0034486.2.mrna1;Target=FBgn0034486.2 1 23 +
Chr2	stalkie_big_nohaplotig	CDS	2447042	2447207	.	-	1	Parent=FBgn0034486.2.mrna1;Target=FBgn0034486.2 513 678 +
Chr2	stalkie_big_nohaplotig	CDS	2447277	2447620	.	-	0	Parent=FBgn0034486.2.mrna1;Target=FBgn0034486.2 169 512 +
Chr2	stalkie_big_nohaplotig	CDS	2447690	2447834	.	-	1	Parent=FBgn0034486.2.mrna1;Target=FBgn0034486.2 24 168 +
Chr2	stalkie_big_nohaplotig	CDS	2447921	2447943	.	-	0	Parent=FBgn0034486.2.mrna1;Target=FBgn0034486.2 1 23 +
Chr2	gffcl	locus	2450741	2451782	.	-	.	ID=RLOC_00014072;geneIDs=comp152410_c0_seq1.path1;transcripts=comp152410_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2450741	2451782	.	-	.	ID=comp152410_c0_seq1.mrna1;geneID=comp152410_c0_seq1.path1;Name=comp152410_c0_seq1;Dir=indeterminatecoverage=99.6;identity=95.5;matches=998;mismatches=41;indels=6;unknowns=0;Target=comp152410_c0_seq1 1046 5 .;CDS_Target=comp152410_c0_seq1 364 206 .;locus=RLOC_00014072
Chr2	stalkie_big_nohaplotig	exon	2450741	2451782	95	-	.	Parent=comp152410_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2451422	2451580	.	-	0	Parent=comp152410_c0_seq1.mrna1
Chr2	gffcl	locus	2453575	2454075	.	-	.	ID=RLOC_00014073;geneIDs=comp151442_c0_seq1.path1;transcripts=comp151442_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2453575	2454075	.	-	.	ID=comp151442_c0_seq1.mrna1;geneID=comp151442_c0_seq1.path1;Name=comp151442_c0_seq1;Dir=indeterminatecoverage=98.6;identity=94.8;matches=476;mismatches=25;indels=1;unknowns=0;Target=comp151442_c0_seq1 509 8 .;CDS_Target=comp151442_c0_seq1 146 72 .;locus=RLOC_00014073
Chr2	stalkie_big_nohaplotig	exon	2453575	2454075	94	-	.	Parent=comp151442_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2453938	2454011	.	-	0	Parent=comp151442_c0_seq1.mrna1
Chr2	gffcl	locus	2454578	2454992	.	+	.	ID=RLOC_00014074;geneIDs=comp144131_c0_seq1.path1;transcripts=comp144131_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2454578	2454992	.	+	.	ID=comp144131_c0_seq1.mrna1;geneID=comp144131_c0_seq1.path1;Name=comp144131_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=415;mismatches=0;indels=0;unknowns=0;Target=comp144131_c0_seq1 415 1 .;CDS_Target=comp144131_c0_seq1 415 326 .;locus=RLOC_00014074
Chr2	stalkie_big_nohaplotig	exon	2454578	2454992	100	+	.	Parent=comp144131_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2454903	2454992	.	+	0	Parent=comp144131_c0_seq1.mrna1
Chr2	gffcl	locus	2455016	2456669	.	+	.	ID=RLOC_00014075;geneIDs=FBgn0000078.1.path1;transcripts=FBgn0000078.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2455016	2456669	.	+	.	ID=FBgn0000078.1.mrna1;geneID=FBgn0000078.1.path1;Name=FBgn0000078.1;Dir=sensecoverage=100.0;identity=98.3;matches=1516;mismatches=26;indels=0;unknowns=0;locus=RLOC_00014075
Chr2	stalkie_big_nohaplotig	exon	2455016	2455252	98	+	.	Parent=FBgn0000078.1.mrna1;Target=FBgn0000078.1 1 237 +
Chr2	stalkie_big_nohaplotig	exon	2455312	2455779	99	+	.	Parent=FBgn0000078.1.mrna1;Target=FBgn0000078.1 238 705 +
Chr2	stalkie_big_nohaplotig	exon	2455833	2456669	97	+	.	Parent=FBgn0000078.1.mrna1;Target=FBgn0000078.1 706 1542 +
Chr2	stalkie_big_nohaplotig	CDS	2455016	2455252	.	+	0	Parent=FBgn0000078.1.mrna1;Target=FBgn0000078.1 1 237 +
Chr2	stalkie_big_nohaplotig	CDS	2455312	2455779	.	+	0	Parent=FBgn0000078.1.mrna1;Target=FBgn0000078.1 238 705 +
Chr2	stalkie_big_nohaplotig	CDS	2455833	2456669	.	+	0	Parent=FBgn0000078.1.mrna1;Target=FBgn0000078.1 706 1542 +
Chr2	gffcl	locus	2459198	2459695	.	-	.	ID=RLOC_00014076;geneIDs=comp144681_c0_seq1.path1;transcripts=comp144681_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2459198	2459695	.	-	.	ID=comp144681_c0_seq1.mrna1;geneID=comp144681_c0_seq1.path1;Name=comp144681_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.8;matches=462;mismatches=2;indels=34;unknowns=0;Target=comp144681_c0_seq1 464 1 .;CDS_Target=comp144681_c0_seq1 223 122 .;locus=RLOC_00014076
Chr2	stalkie_big_nohaplotig	exon	2459198	2459695	92	-	.	Parent=comp144681_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2459473	2459574	.	-	0	Parent=comp144681_c0_seq1.mrna1
Chr2	gffcl	locus	2461908	2464546	.	+	.	ID=RLOC_00014077;geneIDs=FBgn0030691.1.path1;transcripts=FBgn0030691.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2461908	2464546	.	+	.	ID=FBgn0030691.1.mrna1;geneID=FBgn0030691.1.path1;Name=FBgn0030691.1;Dir=sensecoverage=100.0;identity=99.9;matches=2287;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014077
Chr2	stalkie_big_nohaplotig	exon	2461908	2461973	100	+	.	Parent=FBgn0030691.1.mrna1;Target=FBgn0030691.1 1 66 +
Chr2	stalkie_big_nohaplotig	exon	2462030	2462577	100	+	.	Parent=FBgn0030691.1.mrna1;Target=FBgn0030691.1 67 614 +
Chr2	stalkie_big_nohaplotig	exon	2462643	2462913	100	+	.	Parent=FBgn0030691.1.mrna1;Target=FBgn0030691.1 615 885 +
Chr2	stalkie_big_nohaplotig	exon	2463001	2463234	100	+	.	Parent=FBgn0030691.1.mrna1;Target=FBgn0030691.1 886 1119 +
Chr2	stalkie_big_nohaplotig	exon	2463316	2463828	100	+	.	Parent=FBgn0030691.1.mrna1;Target=FBgn0030691.1 1120 1632 +
Chr2	stalkie_big_nohaplotig	exon	2463890	2464546	99	+	.	Parent=FBgn0030691.1.mrna1;Target=FBgn0030691.1 1633 2289 +
Chr2	stalkie_big_nohaplotig	CDS	2461908	2461973	.	+	0	Parent=FBgn0030691.1.mrna1;Target=FBgn0030691.1 1 66 +
Chr2	stalkie_big_nohaplotig	CDS	2462030	2462577	.	+	0	Parent=FBgn0030691.1.mrna1;Target=FBgn0030691.1 67 614 +
Chr2	stalkie_big_nohaplotig	CDS	2462643	2462913	.	+	1	Parent=FBgn0030691.1.mrna1;Target=FBgn0030691.1 615 885 +
Chr2	stalkie_big_nohaplotig	CDS	2463001	2463234	.	+	0	Parent=FBgn0030691.1.mrna1;Target=FBgn0030691.1 886 1119 +
Chr2	stalkie_big_nohaplotig	CDS	2463316	2463828	.	+	0	Parent=FBgn0030691.1.mrna1;Target=FBgn0030691.1 1120 1632 +
Chr2	stalkie_big_nohaplotig	CDS	2463890	2464546	.	+	0	Parent=FBgn0030691.1.mrna1;Target=FBgn0030691.1 1633 2289 +
Chr2	gffcl	locus	2465256	2468062	.	-	.	ID=RLOC_00014078;geneIDs=FBgn0034488.1.path1;transcripts=FBgn0034488.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2465256	2468062	.	-	.	ID=FBgn0034488.1.mrna1;geneID=FBgn0034488.1.path1;Name=FBgn0034488.1;Dir=sensecoverage=100.0;identity=99.5;matches=1704;mismatches=9;indels=0;unknowns=0;locus=RLOC_00014078
Chr2	stalkie_big_nohaplotig	exon	2465256	2465472	100	-	.	Parent=FBgn0034488.1.mrna1;Target=FBgn0034488.1 1497 1713 +
Chr2	stalkie_big_nohaplotig	exon	2465533	2466140	99	-	.	Parent=FBgn0034488.1.mrna1;Target=FBgn0034488.1 889 1496 +
Chr2	stalkie_big_nohaplotig	exon	2466391	2466632	99	-	.	Parent=FBgn0034488.1.mrna1;Target=FBgn0034488.1 647 888 +
Chr2	stalkie_big_nohaplotig	exon	2466718	2467107	98	-	.	Parent=FBgn0034488.1.mrna1;Target=FBgn0034488.1 257 646 +
Chr2	stalkie_big_nohaplotig	exon	2467168	2467363	100	-	.	Parent=FBgn0034488.1.mrna1;Target=FBgn0034488.1 61 256 +
Chr2	stalkie_big_nohaplotig	exon	2468003	2468062	100	-	.	Parent=FBgn0034488.1.mrna1;Target=FBgn0034488.1 1 60 +
Chr2	stalkie_big_nohaplotig	CDS	2465256	2465472	.	-	1	Parent=FBgn0034488.1.mrna1;Target=FBgn0034488.1 1497 1713 +
Chr2	stalkie_big_nohaplotig	CDS	2465533	2466140	.	-	0	Parent=FBgn0034488.1.mrna1;Target=FBgn0034488.1 889 1496 +
Chr2	stalkie_big_nohaplotig	CDS	2466391	2466632	.	-	2	Parent=FBgn0034488.1.mrna1;Target=FBgn0034488.1 647 888 +
Chr2	stalkie_big_nohaplotig	CDS	2466718	2467107	.	-	2	Parent=FBgn0034488.1.mrna1;Target=FBgn0034488.1 257 646 +
Chr2	stalkie_big_nohaplotig	CDS	2467168	2467363	.	-	0	Parent=FBgn0034488.1.mrna1;Target=FBgn0034488.1 61 256 +
Chr2	stalkie_big_nohaplotig	CDS	2468003	2468062	.	-	0	Parent=FBgn0034488.1.mrna1;Target=FBgn0034488.1 1 60 +
Chr2	gffcl	locus	2471276	2477270	.	-	.	ID=RLOC_00014079;geneIDs=FBgn0034490.1.path1;transcripts=FBgn0034490.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2471276	2477270	.	-	.	ID=FBgn0034490.1.mrna1;geneID=FBgn0034490.1.path1;Name=FBgn0034490.1;Dir=sensecoverage=100.0;identity=99.4;matches=1393;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014079
Chr2	stalkie_big_nohaplotig	exon	2471276	2471431	100	-	.	Parent=FBgn0034490.1.mrna1;Target=FBgn0034490.1 1246 1401 +
Chr2	stalkie_big_nohaplotig	exon	2471492	2471733	100	-	.	Parent=FBgn0034490.1.mrna1;Target=FBgn0034490.1 1004 1245 +
Chr2	stalkie_big_nohaplotig	exon	2471790	2471946	98	-	.	Parent=FBgn0034490.1.mrna1;Target=FBgn0034490.1 847 1003 +
Chr2	stalkie_big_nohaplotig	exon	2472016	2472138	98	-	.	Parent=FBgn0034490.1.mrna1;Target=FBgn0034490.1 724 846 +
Chr2	stalkie_big_nohaplotig	exon	2472208	2472513	99	-	.	Parent=FBgn0034490.1.mrna1;Target=FBgn0034490.1 418 723 +
Chr2	stalkie_big_nohaplotig	exon	2472582	2472818	100	-	.	Parent=FBgn0034490.1.mrna1;Target=FBgn0034490.1 181 417 +
Chr2	stalkie_big_nohaplotig	exon	2473449	2473591	99	-	.	Parent=FBgn0034490.1.mrna1;Target=FBgn0034490.1 38 180 +
Chr2	stalkie_big_nohaplotig	exon	2477234	2477270	100	-	.	Parent=FBgn0034490.1.mrna1;Target=FBgn0034490.1 1 37 +
Chr2	stalkie_big_nohaplotig	CDS	2471276	2471431	.	-	0	Parent=FBgn0034490.1.mrna1;Target=FBgn0034490.1 1246 1401 +
Chr2	stalkie_big_nohaplotig	CDS	2471492	2471733	.	-	2	Parent=FBgn0034490.1.mrna1;Target=FBgn0034490.1 1004 1245 +
Chr2	stalkie_big_nohaplotig	CDS	2471790	2471946	.	-	0	Parent=FBgn0034490.1.mrna1;Target=FBgn0034490.1 847 1003 +
Chr2	stalkie_big_nohaplotig	CDS	2472016	2472138	.	-	0	Parent=FBgn0034490.1.mrna1;Target=FBgn0034490.1 724 846 +
Chr2	stalkie_big_nohaplotig	CDS	2472208	2472513	.	-	0	Parent=FBgn0034490.1.mrna1;Target=FBgn0034490.1 418 723 +
Chr2	stalkie_big_nohaplotig	CDS	2472582	2472818	.	-	0	Parent=FBgn0034490.1.mrna1;Target=FBgn0034490.1 181 417 +
Chr2	stalkie_big_nohaplotig	CDS	2473449	2473591	.	-	2	Parent=FBgn0034490.1.mrna1;Target=FBgn0034490.1 38 180 +
Chr2	stalkie_big_nohaplotig	CDS	2477234	2477270	.	-	0	Parent=FBgn0034490.1.mrna1;Target=FBgn0034490.1 1 37 +
Chr2	gffcl	locus	2495484	2514023	.	-	.	ID=RLOC_00014080;geneIDs=comp159464_c0_seq1.path1;transcripts=comp159464_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2495484	2514023	.	-	.	ID=comp159464_c0_seq1.mrna1;geneID=comp159464_c0_seq1.path1;Name=comp159464_c0_seq1;Dir=indeterminatecoverage=92.4;identity=97.3;matches=1103;mismatches=14;indels=17;unknowns=0;Target=comp159464_c0_seq1 99 1 .;locus=RLOC_00014080
Chr2	stalkie_big_nohaplotig	exon	2495484	2495490	100	-	.	Parent=comp159464_c0_seq1.mrna1;Target=comp159464_c0_seq1 1136 1130 .
Chr2	stalkie_big_nohaplotig	exon	2502354	2502359	100	-	.	Parent=comp159464_c0_seq1.mrna1;Target=comp159464_c0_seq1 1129 1124 .
Chr2	stalkie_big_nohaplotig	exon	2503788	2503792	100	-	.	Parent=comp159464_c0_seq1.mrna1;Target=comp159464_c0_seq1 1123 1119 .
Chr2	stalkie_big_nohaplotig	exon	2509821	2510230	96	-	.	Parent=comp159464_c0_seq1.mrna1;Target=comp159464_c0_seq1 1105 702 .
Chr2	stalkie_big_nohaplotig	exon	2513326	2514023	97	-	.	Parent=comp159464_c0_seq1.mrna1;Target=comp159464_c0_seq1 701 1 .
Chr2	stalkie_big_nohaplotig	CDS	2513925	2514023	.	-	0	Parent=comp159464_c0_seq1.mrna1
Chr2	gffcl	locus	2498858	2503630	.	-	.	ID=RLOC_00014081;geneIDs=FBgn0025720.1.path1;transcripts=FBgn0025720.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2498858	2503630	.	-	.	ID=FBgn0025720.1.mrna1;geneID=FBgn0025720.1.path1;Name=FBgn0025720.1;Dir=sensecoverage=100.0;identity=99.6;matches=1521;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014081
Chr2	stalkie_big_nohaplotig	exon	2498858	2498956	100	-	.	Parent=FBgn0025720.1.mrna1;Target=FBgn0025720.1 1429 1527 +
Chr2	stalkie_big_nohaplotig	exon	2499994	2500145	100	-	.	Parent=FBgn0025720.1.mrna1;Target=FBgn0025720.1 1277 1428 +
Chr2	stalkie_big_nohaplotig	exon	2500208	2500371	98	-	.	Parent=FBgn0025720.1.mrna1;Target=FBgn0025720.1 1113 1276 +
Chr2	stalkie_big_nohaplotig	exon	2500427	2500608	100	-	.	Parent=FBgn0025720.1.mrna1;Target=FBgn0025720.1 931 1112 +
Chr2	stalkie_big_nohaplotig	exon	2500699	2500848	100	-	.	Parent=FBgn0025720.1.mrna1;Target=FBgn0025720.1 781 930 +
Chr2	stalkie_big_nohaplotig	exon	2501746	2501930	100	-	.	Parent=FBgn0025720.1.mrna1;Target=FBgn0025720.1 596 780 +
Chr2	stalkie_big_nohaplotig	exon	2501999	2502345	99	-	.	Parent=FBgn0025720.1.mrna1;Target=FBgn0025720.1 249 595 +
Chr2	stalkie_big_nohaplotig	exon	2502419	2502545	100	-	.	Parent=FBgn0025720.1.mrna1;Target=FBgn0025720.1 122 248 +
Chr2	stalkie_big_nohaplotig	exon	2503510	2503630	99	-	.	Parent=FBgn0025720.1.mrna1;Target=FBgn0025720.1 1 121 +
Chr2	stalkie_big_nohaplotig	CDS	2498858	2498956	.	-	0	Parent=FBgn0025720.1.mrna1;Target=FBgn0025720.1 1429 1527 +
Chr2	stalkie_big_nohaplotig	CDS	2499994	2500145	.	-	2	Parent=FBgn0025720.1.mrna1;Target=FBgn0025720.1 1277 1428 +
Chr2	stalkie_big_nohaplotig	CDS	2500208	2500371	.	-	1	Parent=FBgn0025720.1.mrna1;Target=FBgn0025720.1 1113 1276 +
Chr2	stalkie_big_nohaplotig	CDS	2500427	2500608	.	-	0	Parent=FBgn0025720.1.mrna1;Target=FBgn0025720.1 931 1112 +
Chr2	stalkie_big_nohaplotig	CDS	2500699	2500848	.	-	0	Parent=FBgn0025720.1.mrna1;Target=FBgn0025720.1 781 930 +
Chr2	stalkie_big_nohaplotig	CDS	2501746	2501930	.	-	2	Parent=FBgn0025720.1.mrna1;Target=FBgn0025720.1 596 780 +
Chr2	stalkie_big_nohaplotig	CDS	2501999	2502345	.	-	1	Parent=FBgn0025720.1.mrna1;Target=FBgn0025720.1 249 595 +
Chr2	stalkie_big_nohaplotig	CDS	2502419	2502545	.	-	2	Parent=FBgn0025720.1.mrna1;Target=FBgn0025720.1 122 248 +
Chr2	stalkie_big_nohaplotig	CDS	2503510	2503630	.	-	0	Parent=FBgn0025720.1.mrna1;Target=FBgn0025720.1 1 121 +
Chr2	gffcl	locus	2520689	2520948	.	+	.	ID=RLOC_00014083;geneIDs=comp171340_c0_seq1.path1;transcripts=comp171340_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2520689	2520948	.	+	.	ID=comp171340_c0_seq1.mrna1;geneID=comp171340_c0_seq1.path1;Name=comp171340_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=254;mismatches=6;indels=0;unknowns=0;Target=comp171340_c0_seq1 260 1 .;CDS_Target=comp171340_c0_seq1 193 2 .;locus=RLOC_00014083
Chr2	stalkie_big_nohaplotig	exon	2520689	2520948	97	+	.	Parent=comp171340_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2520690	2520881	.	+	0	Parent=comp171340_c0_seq1.mrna1
Chr2	gffcl	locus	2520986	2521847	.	-	.	ID=RLOC_00014084;geneIDs=FBgn0010411.1.path1;transcripts=FBgn0010411.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2520986	2521847	.	-	.	ID=FBgn0010411.1.mrna1;geneID=FBgn0010411.1.path1;Name=FBgn0010411.1;Dir=sensecoverage=97.2;identity=99.6;matches=491;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014084
Chr2	stalkie_big_nohaplotig	exon	2520986	2521252	99	-	.	Parent=FBgn0010411.1.mrna1;Target=FBgn0010411.1 241 507 +
Chr2	stalkie_big_nohaplotig	exon	2521316	2521501	99	-	.	Parent=FBgn0010411.1.mrna1;Target=FBgn0010411.1 55 240 +
Chr2	stalkie_big_nohaplotig	exon	2521808	2521847	100	-	.	Parent=FBgn0010411.1.mrna1;Target=FBgn0010411.1 15 54 +
Chr2	stalkie_big_nohaplotig	CDS	2520986	2521252	.	-	0	Parent=FBgn0010411.1.mrna1;Target=FBgn0010411.1 241 507 +
Chr2	stalkie_big_nohaplotig	CDS	2521316	2521501	.	-	0	Parent=FBgn0010411.1.mrna1;Target=FBgn0010411.1 55 240 +
Chr2	stalkie_big_nohaplotig	CDS	2521808	2521846	.	-	0	Parent=FBgn0010411.1.mrna1;Target=FBgn0010411.1 16 54 +
Chr2	gffcl	locus	2547142	2548424	.	-	.	ID=RLOC_00014085;geneIDs=comp158682_c0_seq1.path1;transcripts=comp158682_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2547142	2548424	.	-	.	ID=comp158682_c0_seq1.mrna1;geneID=comp158682_c0_seq1.path1;Name=comp158682_c0_seq1;Dir=indeterminatecoverage=94.0;identity=98.4;matches=1263;mismatches=16;indels=4;unknowns=0;Target=comp158682_c0_seq1 1291 13 .;CDS_Target=comp158682_c0_seq1 343 62 .;locus=RLOC_00014085
Chr2	stalkie_big_nohaplotig	exon	2547142	2548424	98	-	.	Parent=comp158682_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2548090	2548371	.	-	0	Parent=comp158682_c0_seq1.mrna1
Chr2	gffcl	locus	2583018	2583652	.	-	.	ID=RLOC_00014086;geneIDs=comp155878_c0_seq1.path1;transcripts=comp155878_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2583018	2583652	.	-	.	ID=comp155878_c0_seq1.mrna1;geneID=comp155878_c0_seq1.path1;Name=comp155878_c0_seq1;Dir=indeterminatecoverage=68.1;identity=99.4;matches=631;mismatches=4;indels=0;unknowns=0;Target=comp155878_c0_seq1 635 1 .;CDS_Target=comp155878_c0_seq1 456 271 .;locus=RLOC_00014086
Chr2	stalkie_big_nohaplotig	exon	2583018	2583652	99	-	.	Parent=comp155878_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2583197	2583382	.	-	0	Parent=comp155878_c0_seq1.mrna1
Chr2	gffcl	locus	2586758	2588074	.	-	.	ID=RLOC_00014087;geneIDs=FBgn0032391.1.path1;transcripts=FBgn0032391.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2586758	2588074	.	-	.	ID=FBgn0032391.1.mrna1;geneID=FBgn0032391.1.path1;Name=FBgn0032391.1;Dir=sensecoverage=100.0;identity=99.8;matches=1258;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014087
Chr2	stalkie_big_nohaplotig	exon	2586758	2587817	99	-	.	Parent=FBgn0032391.1.mrna1;Target=FBgn0032391.1 201 1260 +
Chr2	stalkie_big_nohaplotig	exon	2587875	2588074	99	-	.	Parent=FBgn0032391.1.mrna1;Target=FBgn0032391.1 1 200 +
Chr2	stalkie_big_nohaplotig	CDS	2586758	2587817	.	-	1	Parent=FBgn0032391.1.mrna1;Target=FBgn0032391.1 201 1260 +
Chr2	stalkie_big_nohaplotig	CDS	2587875	2588074	.	-	0	Parent=FBgn0032391.1.mrna1;Target=FBgn0032391.1 1 200 +
Chr2	gffcl	locus	2600410	2602694	.	+	.	ID=RLOC_00014088;geneIDs=FBgn0011659.1.path1;transcripts=FBgn0011659.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2600410	2602694	.	+	.	ID=FBgn0011659.1.mrna1;geneID=FBgn0011659.1.path1;Name=FBgn0011659.1;Dir=sensecoverage=100.0;identity=99.9;matches=2052;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014088
Chr2	stalkie_big_nohaplotig	exon	2600410	2600570	99	+	.	Parent=FBgn0011659.1.mrna1;Target=FBgn0011659.1 1 161 +
Chr2	stalkie_big_nohaplotig	exon	2600627	2600890	100	+	.	Parent=FBgn0011659.1.mrna1;Target=FBgn0011659.1 162 425 +
Chr2	stalkie_big_nohaplotig	exon	2600947	2601374	100	+	.	Parent=FBgn0011659.1.mrna1;Target=FBgn0011659.1 426 853 +
Chr2	stalkie_big_nohaplotig	exon	2601427	2602072	100	+	.	Parent=FBgn0011659.1.mrna1;Target=FBgn0011659.1 854 1499 +
Chr2	stalkie_big_nohaplotig	exon	2602139	2602694	99	+	.	Parent=FBgn0011659.1.mrna1;Target=FBgn0011659.1 1500 2055 +
Chr2	stalkie_big_nohaplotig	CDS	2600410	2600570	.	+	0	Parent=FBgn0011659.1.mrna1;Target=FBgn0011659.1 1 161 +
Chr2	stalkie_big_nohaplotig	CDS	2600627	2600890	.	+	1	Parent=FBgn0011659.1.mrna1;Target=FBgn0011659.1 162 425 +
Chr2	stalkie_big_nohaplotig	CDS	2600947	2601374	.	+	1	Parent=FBgn0011659.1.mrna1;Target=FBgn0011659.1 426 853 +
Chr2	stalkie_big_nohaplotig	CDS	2601427	2602072	.	+	2	Parent=FBgn0011659.1.mrna1;Target=FBgn0011659.1 854 1499 +
Chr2	stalkie_big_nohaplotig	CDS	2602139	2602694	.	+	1	Parent=FBgn0011659.1.mrna1;Target=FBgn0011659.1 1500 2055 +
Chr2	gffcl	locus	2602818	2603515	.	-	.	ID=RLOC_00014089;geneIDs=FBgn0033274.2.path1;transcripts=FBgn0033274.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2602818	2603515	.	-	.	ID=FBgn0033274.2.mrna1;geneID=FBgn0033274.2.path1;Name=FBgn0033274.2;Dir=sensecoverage=100.0;identity=100.0;matches=498;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014089
Chr2	stalkie_big_nohaplotig	exon	2602818	2603085	100	-	.	Parent=FBgn0033274.2.mrna1;Target=FBgn0033274.2 231 498 +
Chr2	stalkie_big_nohaplotig	exon	2603194	2603402	100	-	.	Parent=FBgn0033274.2.mrna1;Target=FBgn0033274.2 22 230 +
Chr2	stalkie_big_nohaplotig	exon	2603495	2603515	100	-	.	Parent=FBgn0033274.2.mrna1;Target=FBgn0033274.2 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	2602818	2603085	.	-	1	Parent=FBgn0033274.2.mrna1;Target=FBgn0033274.2 231 498 +
Chr2	stalkie_big_nohaplotig	CDS	2603194	2603402	.	-	0	Parent=FBgn0033274.2.mrna1;Target=FBgn0033274.2 22 230 +
Chr2	stalkie_big_nohaplotig	CDS	2603495	2603515	.	-	0	Parent=FBgn0033274.2.mrna1;Target=FBgn0033274.2 1 21 +
Chr2	gffcl	locus	2603836	2605604	.	-	.	ID=RLOC_00014090;geneIDs=FBgn0033273.1.path1;transcripts=FBgn0033273.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2603836	2605604	.	-	.	ID=FBgn0033273.1.mrna1;geneID=FBgn0033273.1.path1;Name=FBgn0033273.1;Dir=sensecoverage=100.0;identity=99.7;matches=1385;mismatches=4;indels=0;unknowns=0;locus=RLOC_00014090
Chr2	stalkie_big_nohaplotig	exon	2603836	2603982	100	-	.	Parent=FBgn0033273.1.mrna1;Target=FBgn0033273.1 1243 1389 +
Chr2	stalkie_big_nohaplotig	exon	2604036	2604231	100	-	.	Parent=FBgn0033273.1.mrna1;Target=FBgn0033273.1 1047 1242 +
Chr2	stalkie_big_nohaplotig	exon	2604284	2604346	100	-	.	Parent=FBgn0033273.1.mrna1;Target=FBgn0033273.1 984 1046 +
Chr2	stalkie_big_nohaplotig	exon	2604513	2605260	99	-	.	Parent=FBgn0033273.1.mrna1;Target=FBgn0033273.1 236 983 +
Chr2	stalkie_big_nohaplotig	exon	2605320	2605467	99	-	.	Parent=FBgn0033273.1.mrna1;Target=FBgn0033273.1 88 235 +
Chr2	stalkie_big_nohaplotig	exon	2605518	2605604	100	-	.	Parent=FBgn0033273.1.mrna1;Target=FBgn0033273.1 1 87 +
Chr2	stalkie_big_nohaplotig	CDS	2603836	2603982	.	-	0	Parent=FBgn0033273.1.mrna1;Target=FBgn0033273.1 1243 1389 +
Chr2	stalkie_big_nohaplotig	CDS	2604036	2604231	.	-	1	Parent=FBgn0033273.1.mrna1;Target=FBgn0033273.1 1047 1242 +
Chr2	stalkie_big_nohaplotig	CDS	2604284	2604346	.	-	1	Parent=FBgn0033273.1.mrna1;Target=FBgn0033273.1 984 1046 +
Chr2	stalkie_big_nohaplotig	CDS	2604513	2605260	.	-	2	Parent=FBgn0033273.1.mrna1;Target=FBgn0033273.1 236 983 +
Chr2	stalkie_big_nohaplotig	CDS	2605320	2605467	.	-	0	Parent=FBgn0033273.1.mrna1;Target=FBgn0033273.1 88 235 +
Chr2	stalkie_big_nohaplotig	CDS	2605518	2605604	.	-	0	Parent=FBgn0033273.1.mrna1;Target=FBgn0033273.1 1 87 +
Chr2	gffcl	locus	2607016	2609495	.	+	.	ID=RLOC_00014091;geneIDs=FBgn0033984.1.path1;transcripts=FBgn0033984.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2607016	2609495	.	+	.	ID=FBgn0033984.1.mrna1;geneID=FBgn0033984.1.path1;Name=FBgn0033984.1;Dir=sensecoverage=100.0;identity=100.0;matches=2206;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014091
Chr2	stalkie_big_nohaplotig	exon	2607016	2607186	100	+	.	Parent=FBgn0033984.1.mrna1;Target=FBgn0033984.1 1 171 +
Chr2	stalkie_big_nohaplotig	exon	2607243	2607378	100	+	.	Parent=FBgn0033984.1.mrna1;Target=FBgn0033984.1 172 307 +
Chr2	stalkie_big_nohaplotig	exon	2607435	2607724	100	+	.	Parent=FBgn0033984.1.mrna1;Target=FBgn0033984.1 308 597 +
Chr2	stalkie_big_nohaplotig	exon	2607886	2609495	99	+	.	Parent=FBgn0033984.1.mrna1;Target=FBgn0033984.1 598 2207 +
Chr2	stalkie_big_nohaplotig	CDS	2607016	2607186	.	+	0	Parent=FBgn0033984.1.mrna1;Target=FBgn0033984.1 1 171 +
Chr2	stalkie_big_nohaplotig	CDS	2607243	2607378	.	+	0	Parent=FBgn0033984.1.mrna1;Target=FBgn0033984.1 172 307 +
Chr2	stalkie_big_nohaplotig	CDS	2607435	2607724	.	+	2	Parent=FBgn0033984.1.mrna1;Target=FBgn0033984.1 308 597 +
Chr2	stalkie_big_nohaplotig	CDS	2607886	2609493	.	+	0	Parent=FBgn0033984.1.mrna1;Target=FBgn0033984.1 598 2205 +
Chr2	gffcl	locus	2611232	2611905	.	-	.	ID=RLOC_00014092;geneIDs=comp118225_c0_seq1.path1;transcripts=comp118225_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2611232	2611905	.	-	.	ID=comp118225_c0_seq1.mrna1;geneID=comp118225_c0_seq1.path1;Name=comp118225_c0_seq1;Dir=indeterminatecoverage=94.5;identity=96.3;matches=674;mismatches=0;indels=26;unknowns=0;Target=comp118225_c0_seq1 700 1 .;CDS_Target=comp118225_c0_seq1 380 258 .;locus=RLOC_00014092
Chr2	stalkie_big_nohaplotig	exon	2611232	2611905	96	-	.	Parent=comp118225_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2611551	2611648	.	-	0	Parent=comp118225_c0_seq1.mrna1
Chr2	gffcl	locus	2616453	2618442	.	+	.	ID=RLOC_00014093;geneIDs=FBgn0037612.1.path1;transcripts=FBgn0037612.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2616453	2618442	.	+	.	ID=FBgn0037612.1.mrna1;geneID=FBgn0037612.1.path1;Name=FBgn0037612.1;Dir=sensecoverage=100.0;identity=99.7;matches=1719;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014093
Chr2	stalkie_big_nohaplotig	exon	2616453	2616513	100	+	.	Parent=FBgn0037612.1.mrna1;Target=FBgn0037612.1 1 61 +
Chr2	stalkie_big_nohaplotig	exon	2616658	2617147	99	+	.	Parent=FBgn0037612.1.mrna1;Target=FBgn0037612.1 62 551 +
Chr2	stalkie_big_nohaplotig	exon	2617206	2617354	100	+	.	Parent=FBgn0037612.1.mrna1;Target=FBgn0037612.1 552 700 +
Chr2	stalkie_big_nohaplotig	exon	2617418	2618442	99	+	.	Parent=FBgn0037612.1.mrna1;Target=FBgn0037612.1 701 1725 +
Chr2	stalkie_big_nohaplotig	CDS	2616453	2616513	.	+	0	Parent=FBgn0037612.1.mrna1;Target=FBgn0037612.1 1 61 +
Chr2	stalkie_big_nohaplotig	CDS	2616658	2617147	.	+	2	Parent=FBgn0037612.1.mrna1;Target=FBgn0037612.1 62 551 +
Chr2	stalkie_big_nohaplotig	CDS	2617206	2617354	.	+	1	Parent=FBgn0037612.1.mrna1;Target=FBgn0037612.1 552 700 +
Chr2	stalkie_big_nohaplotig	CDS	2617418	2618442	.	+	2	Parent=FBgn0037612.1.mrna1;Target=FBgn0037612.1 701 1725 +
Chr2	gffcl	locus	2618776	2619368	.	-	.	ID=RLOC_00014094;geneIDs=FBgn0034967.3.path1;transcripts=FBgn0034967.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2618776	2619368	.	-	.	ID=FBgn0034967.3.mrna1;geneID=FBgn0034967.3.path1;Name=FBgn0034967.3;Dir=sensecoverage=100.0;identity=99.8;matches=539;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014094
Chr2	stalkie_big_nohaplotig	exon	2618776	2619243	99	-	.	Parent=FBgn0034967.3.mrna1;Target=FBgn0034967.3 73 540 +
Chr2	stalkie_big_nohaplotig	exon	2619297	2619368	100	-	.	Parent=FBgn0034967.3.mrna1;Target=FBgn0034967.3 1 72 +
Chr2	stalkie_big_nohaplotig	CDS	2618776	2619243	.	-	0	Parent=FBgn0034967.3.mrna1;Target=FBgn0034967.3 73 540 +
Chr2	stalkie_big_nohaplotig	CDS	2619297	2619368	.	-	0	Parent=FBgn0034967.3.mrna1;Target=FBgn0034967.3 1 72 +
Chr2	gffcl	locus	2620164	2622050	.	-	.	ID=RLOC_00014095;geneIDs=FBgn0037612.2.path1;transcripts=FBgn0037612.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2620164	2622050	.	-	.	ID=FBgn0037612.2.mrna1;geneID=FBgn0037612.2.path1;Name=FBgn0037612.2;Dir=sensecoverage=100.0;identity=99.6;matches=1709;mismatches=7;indels=0;unknowns=0;locus=RLOC_00014095
Chr2	stalkie_big_nohaplotig	exon	2620164	2621194	99	-	.	Parent=FBgn0037612.2.mrna1;Target=FBgn0037612.2 686 1716 +
Chr2	stalkie_big_nohaplotig	exon	2621251	2621399	100	-	.	Parent=FBgn0037612.2.mrna1;Target=FBgn0037612.2 537 685 +
Chr2	stalkie_big_nohaplotig	exon	2621458	2621950	98	-	.	Parent=FBgn0037612.2.mrna1;Target=FBgn0037612.2 44 536 +
Chr2	stalkie_big_nohaplotig	exon	2622008	2622050	100	-	.	Parent=FBgn0037612.2.mrna1;Target=FBgn0037612.2 1 43 +
Chr2	stalkie_big_nohaplotig	CDS	2620164	2621194	.	-	2	Parent=FBgn0037612.2.mrna1;Target=FBgn0037612.2 686 1716 +
Chr2	stalkie_big_nohaplotig	CDS	2621251	2621399	.	-	1	Parent=FBgn0037612.2.mrna1;Target=FBgn0037612.2 537 685 +
Chr2	stalkie_big_nohaplotig	CDS	2621458	2621950	.	-	2	Parent=FBgn0037612.2.mrna1;Target=FBgn0037612.2 44 536 +
Chr2	stalkie_big_nohaplotig	CDS	2622008	2622050	.	-	0	Parent=FBgn0037612.2.mrna1;Target=FBgn0037612.2 1 43 +
Chr2	gffcl	locus	2623583	2625569	.	-	.	ID=RLOC_00014096;geneIDs=FBgn0037612.3.path1,comp143651_c0_seq1.path1;transcripts=FBgn0037612.3.mrna1,comp143651_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2623583	2625038	.	-	.	ID=FBgn0037612.3.mrna1;geneID=FBgn0037612.3.path1;Name=FBgn0037612.3;Dir=sensecoverage=78.0;identity=97.8;matches=1307;mismatches=29;indels=0;unknowns=0;locus=RLOC_00014096
Chr2	stalkie_big_nohaplotig	exon	2623583	2624610	99	-	.	Parent=FBgn0037612.3.mrna1;Target=FBgn0037612.3 686 1713 +
Chr2	stalkie_big_nohaplotig	exon	2624674	2624822	97	-	.	Parent=FBgn0037612.3.mrna1;Target=FBgn0037612.3 537 685 +
Chr2	stalkie_big_nohaplotig	exon	2624880	2625038	89	-	.	Parent=FBgn0037612.3.mrna1;Target=FBgn0037612.3 378 536 +
Chr2	stalkie_big_nohaplotig	CDS	2623583	2624610	.	-	2	Parent=FBgn0037612.3.mrna1;Target=FBgn0037612.3 686 1713 +
Chr2	stalkie_big_nohaplotig	CDS	2624674	2624822	.	-	1	Parent=FBgn0037612.3.mrna1;Target=FBgn0037612.3 537 685 +
Chr2	stalkie_big_nohaplotig	CDS	2624880	2625037	.	-	0	Parent=FBgn0037612.3.mrna1;Target=FBgn0037612.3 379 536 +
Chr2	stalkie_big_nohaplotig	mRNA	2624992	2625569	.	-	.	ID=comp143651_c0_seq1.mrna1;geneID=comp143651_c0_seq1.path1;Name=comp143651_c0_seq1;Dir=antisensecoverage=100.0;identity=99.2;matches=493;mismatches=3;indels=1;unknowns=0;locus=RLOC_00014096
Chr2	stalkie_big_nohaplotig	exon	2624992	2625282	99	-	.	Parent=comp143651_c0_seq1.mrna1;Target=comp143651_c0_seq1 1 291 -
Chr2	stalkie_big_nohaplotig	exon	2625365	2625569	98	-	.	Parent=comp143651_c0_seq1.mrna1;Target=comp143651_c0_seq1 292 497 -
Chr2	stalkie_big_nohaplotig	CDS	2624993	2625282	.	-	2	Parent=comp143651_c0_seq1.mrna1;Target=comp143651_c0_seq1 2 291 .
Chr2	stalkie_big_nohaplotig	CDS	2625365	2625428	.	-	0	Parent=comp143651_c0_seq1.mrna1;Target=comp143651_c0_seq1 292 355 .
Chr2	gffcl	locus	2632311	2637725	.	-	.	ID=RLOC_00014098;geneIDs=FBgn0036565.1.path1;transcripts=FBgn0036565.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2632311	2637725	.	-	.	ID=FBgn0036565.1.mrna1;geneID=FBgn0036565.1.path1;Name=FBgn0036565.1;Dir=sensecoverage=78.4;identity=99.4;matches=1773;mismatches=10;indels=0;unknowns=0;locus=RLOC_00014098
Chr2	stalkie_big_nohaplotig	exon	2632311	2632490	99	-	.	Parent=FBgn0036565.1.mrna1;Target=FBgn0036565.1 2095 2274 +
Chr2	stalkie_big_nohaplotig	exon	2632549	2632715	100	-	.	Parent=FBgn0036565.1.mrna1;Target=FBgn0036565.1 1928 2094 +
Chr2	stalkie_big_nohaplotig	exon	2632787	2632887	100	-	.	Parent=FBgn0036565.1.mrna1;Target=FBgn0036565.1 1827 1927 +
Chr2	stalkie_big_nohaplotig	exon	2632947	2633149	98	-	.	Parent=FBgn0036565.1.mrna1;Target=FBgn0036565.1 1624 1826 +
Chr2	stalkie_big_nohaplotig	exon	2633278	2633493	98	-	.	Parent=FBgn0036565.1.mrna1;Target=FBgn0036565.1 1408 1623 +
Chr2	stalkie_big_nohaplotig	exon	2633558	2633721	99	-	.	Parent=FBgn0036565.1.mrna1;Target=FBgn0036565.1 1244 1407 +
Chr2	stalkie_big_nohaplotig	exon	2633803	2633904	100	-	.	Parent=FBgn0036565.1.mrna1;Target=FBgn0036565.1 1142 1243 +
Chr2	stalkie_big_nohaplotig	exon	2633964	2634157	100	-	.	Parent=FBgn0036565.1.mrna1;Target=FBgn0036565.1 948 1141 +
Chr2	stalkie_big_nohaplotig	exon	2634670	2634782	100	-	.	Parent=FBgn0036565.1.mrna1;Target=FBgn0036565.1 835 947 +
Chr2	stalkie_big_nohaplotig	exon	2634846	2635037	100	-	.	Parent=FBgn0036565.1.mrna1;Target=FBgn0036565.1 643 834 +
Chr2	stalkie_big_nohaplotig	exon	2637575	2637725	99	-	.	Parent=FBgn0036565.1.mrna1;Target=FBgn0036565.1 492 642 +
Chr2	stalkie_big_nohaplotig	CDS	2632311	2632490	.	-	0	Parent=FBgn0036565.1.mrna1;Target=FBgn0036565.1 2095 2274 +
Chr2	stalkie_big_nohaplotig	CDS	2632549	2632715	.	-	2	Parent=FBgn0036565.1.mrna1;Target=FBgn0036565.1 1928 2094 +
Chr2	stalkie_big_nohaplotig	CDS	2632787	2632887	.	-	1	Parent=FBgn0036565.1.mrna1;Target=FBgn0036565.1 1827 1927 +
Chr2	stalkie_big_nohaplotig	CDS	2632947	2633149	.	-	0	Parent=FBgn0036565.1.mrna1;Target=FBgn0036565.1 1624 1826 +
Chr2	stalkie_big_nohaplotig	CDS	2633278	2633493	.	-	0	Parent=FBgn0036565.1.mrna1;Target=FBgn0036565.1 1408 1623 +
Chr2	stalkie_big_nohaplotig	CDS	2633558	2633721	.	-	2	Parent=FBgn0036565.1.mrna1;Target=FBgn0036565.1 1244 1407 +
Chr2	stalkie_big_nohaplotig	CDS	2633803	2633904	.	-	2	Parent=FBgn0036565.1.mrna1;Target=FBgn0036565.1 1142 1243 +
Chr2	stalkie_big_nohaplotig	CDS	2633964	2634157	.	-	1	Parent=FBgn0036565.1.mrna1;Target=FBgn0036565.1 948 1141 +
Chr2	stalkie_big_nohaplotig	CDS	2634670	2634782	.	-	0	Parent=FBgn0036565.1.mrna1;Target=FBgn0036565.1 835 947 +
Chr2	stalkie_big_nohaplotig	CDS	2634846	2635037	.	-	0	Parent=FBgn0036565.1.mrna1;Target=FBgn0036565.1 643 834 +
Chr2	stalkie_big_nohaplotig	CDS	2637575	2637724	.	-	0	Parent=FBgn0036565.1.mrna1;Target=FBgn0036565.1 493 642 +
Chr2	gffcl	locus	2635482	2636152	.	+	.	ID=RLOC_00014099;geneIDs=FBgn0003114.1.path1;transcripts=FBgn0003114.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2635482	2636152	.	+	.	ID=FBgn0003114.1.mrna1;geneID=FBgn0003114.1.path1;Name=FBgn0003114.1;Dir=sensecoverage=100.0;identity=98.7;matches=518;mismatches=6;indels=1;unknowns=0;Target=FBgn0003114.1 3 23 +;locus=RLOC_00014099
Chr2	stalkie_big_nohaplotig	exon	2635482	2635772	98	+	.	Parent=FBgn0003114.1.mrna1;Target=FBgn0003114.1 1 292 +
Chr2	stalkie_big_nohaplotig	exon	2635841	2636041	98	+	.	Parent=FBgn0003114.1.mrna1;Target=FBgn0003114.1 293 493 +
Chr2	stalkie_big_nohaplotig	exon	2636121	2636152	100	+	.	Parent=FBgn0003114.1.mrna1;Target=FBgn0003114.1 494 525 +
Chr2	stalkie_big_nohaplotig	CDS	2635484	2635503	.	+	0	Parent=FBgn0003114.1.mrna1
Chr2	gffcl	locus	2666203	2682031	.	+	.	ID=RLOC_00014100;geneIDs=FBgn0053087.1.path1;transcripts=FBgn0053087.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2666203	2682031	.	+	.	ID=FBgn0053087.1.mrna1;geneID=FBgn0053087.1.path1;Name=FBgn0053087.1;Dir=sensecoverage=100.0;identity=99.8;matches=12454;mismatches=22;indels=1;unknowns=0;locus=RLOC_00014100
Chr2	stalkie_big_nohaplotig	exon	2666203	2666292	100	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 1 90 +
Chr2	stalkie_big_nohaplotig	exon	2667143	2667467	99	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 91 416 +
Chr2	stalkie_big_nohaplotig	exon	2667651	2667848	99	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 417 614 +
Chr2	stalkie_big_nohaplotig	exon	2667905	2668096	98	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 615 806 +
Chr2	stalkie_big_nohaplotig	exon	2668158	2668352	99	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 807 1001 +
Chr2	stalkie_big_nohaplotig	exon	2668409	2668959	99	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 1002 1552 +
Chr2	stalkie_big_nohaplotig	exon	2669028	2669142	100	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 1553 1667 +
Chr2	stalkie_big_nohaplotig	exon	2669198	2670778	99	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 1668 3248 +
Chr2	stalkie_big_nohaplotig	exon	2671326	2671503	100	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 3249 3426 +
Chr2	stalkie_big_nohaplotig	exon	2671561	2671856	99	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 3427 3722 +
Chr2	stalkie_big_nohaplotig	exon	2671920	2672275	100	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 3723 4078 +
Chr2	stalkie_big_nohaplotig	exon	2672345	2672619	100	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 4079 4353 +
Chr2	stalkie_big_nohaplotig	exon	2672749	2677517	99	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 4354 9122 +
Chr2	stalkie_big_nohaplotig	exon	2677582	2677824	100	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 9123 9365 +
Chr2	stalkie_big_nohaplotig	exon	2677885	2678028	100	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 9366 9509 +
Chr2	stalkie_big_nohaplotig	exon	2678083	2678286	100	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 9510 9713 +
Chr2	stalkie_big_nohaplotig	exon	2678361	2678701	100	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 9714 10054 +
Chr2	stalkie_big_nohaplotig	exon	2678760	2679025	100	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 10055 10320 +
Chr2	stalkie_big_nohaplotig	exon	2679079	2679475	99	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 10321 10717 +
Chr2	stalkie_big_nohaplotig	exon	2679543	2679710	100	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 10718 10885 +
Chr2	stalkie_big_nohaplotig	exon	2679775	2680342	100	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 10886 11453 +
Chr2	stalkie_big_nohaplotig	exon	2680409	2680677	100	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 11454 11722 +
Chr2	stalkie_big_nohaplotig	exon	2680740	2680873	99	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 11723 11856 +
Chr2	stalkie_big_nohaplotig	exon	2680937	2681124	99	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 11857 12044 +
Chr2	stalkie_big_nohaplotig	exon	2681470	2681628	99	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 12045 12203 +
Chr2	stalkie_big_nohaplotig	exon	2681696	2681822	100	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 12204 12330 +
Chr2	stalkie_big_nohaplotig	exon	2681885	2682031	100	+	.	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 12331 12477 +
Chr2	stalkie_big_nohaplotig	CDS	2666205	2666292	.	+	0	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 3 90 +
Chr2	stalkie_big_nohaplotig	CDS	2667143	2667248	.	+	2	Parent=FBgn0053087.1.mrna1;Target=FBgn0053087.1 91 197 +
Chr2	gffcl	locus	2682513	2684039	.	+	.	ID=RLOC_00014101;geneIDs=comp160041_c0_seq1.path1;transcripts=comp160041_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2682513	2684039	.	+	.	ID=comp160041_c0_seq1.mrna1;geneID=comp160041_c0_seq1.path1;Name=comp160041_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.0;matches=1513;mismatches=14;indels=1;unknowns=0;Target=comp160041_c0_seq1 1528 1 .;CDS_Target=comp160041_c0_seq1 569 429 .;locus=RLOC_00014101
Chr2	stalkie_big_nohaplotig	exon	2682513	2684039	99	+	.	Parent=comp160041_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2682941	2683081	.	+	0	Parent=comp160041_c0_seq1.mrna1
Chr2	gffcl	locus	2685334	2690642	.	+	.	ID=RLOC_00014102;geneIDs=FBgn0085246.1.path1;transcripts=FBgn0085246.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2685334	2690642	.	+	.	ID=FBgn0085246.1.mrna1;geneID=FBgn0085246.1.path1;Name=FBgn0085246.1;Dir=sensecoverage=100.0;identity=98.9;matches=454;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014102
Chr2	stalkie_big_nohaplotig	exon	2685334	2685408	98	+	.	Parent=FBgn0085246.1.mrna1;Target=FBgn0085246.1 1 75 +
Chr2	stalkie_big_nohaplotig	exon	2690259	2690642	98	+	.	Parent=FBgn0085246.1.mrna1;Target=FBgn0085246.1 76 459 +
Chr2	stalkie_big_nohaplotig	CDS	2685334	2685408	.	+	0	Parent=FBgn0085246.1.mrna1;Target=FBgn0085246.1 1 75 +
Chr2	stalkie_big_nohaplotig	CDS	2690259	2690642	.	+	0	Parent=FBgn0085246.1.mrna1;Target=FBgn0085246.1 76 459 +
Chr2	gffcl	locus	2693928	2700998	.	-	.	ID=RLOC_00014103;geneIDs=FBgn0010109.1.path1;transcripts=FBgn0010109.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2693928	2700998	.	-	.	ID=FBgn0010109.1.mrna1;geneID=FBgn0010109.1.path1;Name=FBgn0010109.1;Dir=sensecoverage=100.0;identity=99.3;matches=1534;mismatches=11;indels=0;unknowns=0;locus=RLOC_00014103
Chr2	stalkie_big_nohaplotig	exon	2693928	2695199	99	-	.	Parent=FBgn0010109.1.mrna1;Target=FBgn0010109.1 274 1545 +
Chr2	stalkie_big_nohaplotig	exon	2698977	2699072	100	-	.	Parent=FBgn0010109.1.mrna1;Target=FBgn0010109.1 178 273 +
Chr2	stalkie_big_nohaplotig	exon	2700822	2700998	98	-	.	Parent=FBgn0010109.1.mrna1;Target=FBgn0010109.1 1 177 +
Chr2	stalkie_big_nohaplotig	CDS	2693928	2695199	.	-	0	Parent=FBgn0010109.1.mrna1;Target=FBgn0010109.1 274 1545 +
Chr2	stalkie_big_nohaplotig	CDS	2698977	2699072	.	-	0	Parent=FBgn0010109.1.mrna1;Target=FBgn0010109.1 178 273 +
Chr2	stalkie_big_nohaplotig	CDS	2700822	2700998	.	-	0	Parent=FBgn0010109.1.mrna1;Target=FBgn0010109.1 1 177 +
Chr2	gffcl	locus	2713427	2715007	.	+	.	ID=RLOC_00014104;geneIDs=FBgn0013726.1.path1;transcripts=FBgn0013726.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2713427	2715007	.	+	.	ID=FBgn0013726.1.mrna1;geneID=FBgn0013726.1.path1;Name=FBgn0013726.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1578;mismatches=3;indels=0;unknowns=0;Target=FBgn0013726.1 1581 1 .;locus=RLOC_00014104
Chr2	stalkie_big_nohaplotig	exon	2713427	2715007	99	+	.	Parent=FBgn0013726.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2713427	2715007	.	+	0	Parent=FBgn0013726.1.mrna1
Chr2	gffcl	locus	2744270	2745930	.	-	.	ID=RLOC_00014105;geneIDs=comp162266_c1_seq1.path1;transcripts=comp162266_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2744270	2745930	.	-	.	ID=comp162266_c1_seq1.mrna1;geneID=comp162266_c1_seq1.path1;Name=comp162266_c1_seq1;Dir=indeterminatecoverage=99.2;identity=99.5;matches=1654;mismatches=6;indels=2;unknowns=0;Target=comp162266_c1_seq1 1675 15 .;CDS_Target=comp162266_c1_seq1 1674 433 .;locus=RLOC_00014105
Chr2	stalkie_big_nohaplotig	exon	2744270	2745930	99	-	.	Parent=comp162266_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2744271	2745512	.	-	0	Parent=comp162266_c1_seq1.mrna1
Chr2	gffcl	locus	2745994	2747442	.	+	.	ID=RLOC_00014106;geneIDs=comp157739_c3_seq1.path3;transcripts=comp157739_c3_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	2745994	2747442	.	+	.	ID=comp157739_c3_seq1.mrna3;geneID=comp157739_c3_seq1.path3;Name=comp157739_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1443;mismatches=6;indels=7;unknowns=0;Target=comp157739_c3_seq1 1456 1 .;CDS_Target=comp157739_c3_seq1 1025 852 .;locus=RLOC_00014106
Chr2	stalkie_big_nohaplotig	exon	2745994	2747442	99	+	.	Parent=comp157739_c3_seq1.mrna3
Chr2	stalkie_big_nohaplotig	CDS	2746843	2747015	.	+	0	Parent=comp157739_c3_seq1.mrna3
Chr2	gffcl	locus	2748044	2748461	.	+	.	ID=RLOC_00014107;geneIDs=comp147232_c0_seq1.path8;transcripts=comp147232_c0_seq1.mrna8
Chr2	stalkie_big_nohaplotig	mRNA	2748044	2748461	.	+	.	ID=comp147232_c0_seq1.mrna8;geneID=comp147232_c0_seq1.path8;Name=comp147232_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=412;mismatches=1;indels=5;unknowns=0;Target=comp147232_c0_seq1 413 1 .;CDS_Target=comp147232_c0_seq1 279 136 .;locus=RLOC_00014107
Chr2	stalkie_big_nohaplotig	exon	2748044	2748461	98	+	.	Parent=comp147232_c0_seq1.mrna8
Chr2	stalkie_big_nohaplotig	CDS	2748184	2748327	.	+	0	Parent=comp147232_c0_seq1.mrna8
Chr2	gffcl	locus	2839102	2839569	.	-	.	ID=RLOC_00014108;geneIDs=comp145775_c0_seq1.path1;transcripts=comp145775_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2839102	2839569	.	-	.	ID=comp145775_c0_seq1.mrna1;geneID=comp145775_c0_seq1.path1;Name=comp145775_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=455;mismatches=13;indels=0;unknowns=0;Target=comp145775_c0_seq1 468 1 .;CDS_Target=comp145775_c0_seq1 189 85 .;locus=RLOC_00014108
Chr2	stalkie_big_nohaplotig	exon	2839102	2839569	97	-	.	Parent=comp145775_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2839381	2839485	.	-	0	Parent=comp145775_c0_seq1.mrna1
Chr2	gffcl	locus	2924931	2926329	.	-	.	ID=RLOC_00014109;geneIDs=comp150595_c0_seq1.path1;transcripts=comp150595_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2924931	2926329	.	-	.	ID=comp150595_c0_seq1.mrna1;geneID=comp150595_c0_seq1.path1;Name=comp150595_c0_seq1;Dir=antisensecoverage=100.0;identity=93.9;matches=1209;mismatches=22;indels=56;unknowns=0;Target=comp150595_c0_seq1 1096 1242 .;locus=RLOC_00014109
Chr2	stalkie_big_nohaplotig	exon	2924931	2925571	88	-	.	Parent=comp150595_c0_seq1.mrna1;Target=comp150595_c0_seq1 1 607 -
Chr2	stalkie_big_nohaplotig	exon	2925630	2925729	98	-	.	Parent=comp150595_c0_seq1.mrna1;Target=comp150595_c0_seq1 608 707 -
Chr2	stalkie_big_nohaplotig	exon	2925795	2926329	99	-	.	Parent=comp150595_c0_seq1.mrna1;Target=comp150595_c0_seq1 708 1242 -
Chr2	stalkie_big_nohaplotig	CDS	2926183	2926329	.	-	0	Parent=comp150595_c0_seq1.mrna1
Chr2	gffcl	locus	2926873	2930659	.	+	.	ID=RLOC_00014110;geneIDs=FBgn0050371.1.path1;transcripts=FBgn0050371.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2926873	2930659	.	+	.	ID=FBgn0050371.1.mrna1;geneID=FBgn0050371.1.path1;Name=FBgn0050371.1;Dir=sensecoverage=100.0;identity=99.5;matches=1236;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014110
Chr2	stalkie_big_nohaplotig	exon	2926873	2926918	95	+	.	Parent=FBgn0050371.1.mrna1;Target=FBgn0050371.1 1 46 +
Chr2	stalkie_big_nohaplotig	exon	2928711	2928937	100	+	.	Parent=FBgn0050371.1.mrna1;Target=FBgn0050371.1 47 273 +
Chr2	stalkie_big_nohaplotig	exon	2929002	2929323	100	+	.	Parent=FBgn0050371.1.mrna1;Target=FBgn0050371.1 274 595 +
Chr2	stalkie_big_nohaplotig	exon	2929441	2929539	100	+	.	Parent=FBgn0050371.1.mrna1;Target=FBgn0050371.1 596 694 +
Chr2	stalkie_big_nohaplotig	exon	2929596	2929761	99	+	.	Parent=FBgn0050371.1.mrna1;Target=FBgn0050371.1 695 860 +
Chr2	stalkie_big_nohaplotig	exon	2930278	2930659	99	+	.	Parent=FBgn0050371.1.mrna1;Target=FBgn0050371.1 861 1242 +
Chr2	stalkie_big_nohaplotig	CDS	2926873	2926918	.	+	0	Parent=FBgn0050371.1.mrna1;Target=FBgn0050371.1 1 46 +
Chr2	stalkie_big_nohaplotig	CDS	2928711	2928937	.	+	2	Parent=FBgn0050371.1.mrna1;Target=FBgn0050371.1 47 273 +
Chr2	stalkie_big_nohaplotig	CDS	2929002	2929323	.	+	0	Parent=FBgn0050371.1.mrna1;Target=FBgn0050371.1 274 595 +
Chr2	stalkie_big_nohaplotig	CDS	2929441	2929539	.	+	2	Parent=FBgn0050371.1.mrna1;Target=FBgn0050371.1 596 694 +
Chr2	stalkie_big_nohaplotig	CDS	2929596	2929761	.	+	2	Parent=FBgn0050371.1.mrna1;Target=FBgn0050371.1 695 860 +
Chr2	stalkie_big_nohaplotig	CDS	2930278	2930659	.	+	1	Parent=FBgn0050371.1.mrna1;Target=FBgn0050371.1 861 1242 +
Chr2	gffcl	locus	2928614	2928677	.	-	.	ID=RLOC_00014111;geneIDs=comp157175_c0_seq1.path1;transcripts=comp157175_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2928614	2928677	.	-	.	ID=comp157175_c0_seq1.mrna1;geneID=comp157175_c0_seq1.path1;Name=comp157175_c0_seq1;Dir=indeterminatecoverage=5.0;identity=96.9;matches=62;mismatches=2;indels=0;unknowns=0;Target=comp157175_c0_seq1 123 60 .;CDS_Target=comp157175_c0_seq1 123 61 .;locus=RLOC_00014111
Chr2	stalkie_big_nohaplotig	exon	2928614	2928677	96	-	.	Parent=comp157175_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	2928614	2928676	.	-	0	Parent=comp157175_c0_seq1.mrna1
Chr2	gffcl	locus	2930945	2933985	.	+	.	ID=RLOC_00014112;geneIDs=FBgn0050375.1.path1;transcripts=FBgn0050375.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2930945	2933985	.	+	.	ID=FBgn0050375.1.mrna1;geneID=FBgn0050375.1.path1;Name=FBgn0050375.1;Dir=sensecoverage=100.0;identity=99.1;matches=1207;mismatches=11;indels=0;unknowns=0;locus=RLOC_00014112
Chr2	stalkie_big_nohaplotig	exon	2930945	2930975	100	+	.	Parent=FBgn0050375.1.mrna1;Target=FBgn0050375.1 1 31 +
Chr2	stalkie_big_nohaplotig	exon	2931058	2931269	98	+	.	Parent=FBgn0050375.1.mrna1;Target=FBgn0050375.1 32 243 +
Chr2	stalkie_big_nohaplotig	exon	2931337	2931670	98	+	.	Parent=FBgn0050375.1.mrna1;Target=FBgn0050375.1 244 577 +
Chr2	stalkie_big_nohaplotig	exon	2933224	2933322	100	+	.	Parent=FBgn0050375.1.mrna1;Target=FBgn0050375.1 578 676 +
Chr2	stalkie_big_nohaplotig	exon	2933375	2933543	98	+	.	Parent=FBgn0050375.1.mrna1;Target=FBgn0050375.1 677 845 +
Chr2	stalkie_big_nohaplotig	exon	2933613	2933985	100	+	.	Parent=FBgn0050375.1.mrna1;Target=FBgn0050375.1 846 1218 +
Chr2	stalkie_big_nohaplotig	CDS	2930945	2930975	.	+	0	Parent=FBgn0050375.1.mrna1;Target=FBgn0050375.1 1 31 +
Chr2	stalkie_big_nohaplotig	CDS	2931058	2931269	.	+	2	Parent=FBgn0050375.1.mrna1;Target=FBgn0050375.1 32 243 +
Chr2	stalkie_big_nohaplotig	CDS	2931337	2931670	.	+	0	Parent=FBgn0050375.1.mrna1;Target=FBgn0050375.1 244 577 +
Chr2	stalkie_big_nohaplotig	CDS	2933224	2933322	.	+	2	Parent=FBgn0050375.1.mrna1;Target=FBgn0050375.1 578 676 +
Chr2	stalkie_big_nohaplotig	CDS	2933375	2933543	.	+	2	Parent=FBgn0050375.1.mrna1;Target=FBgn0050375.1 677 845 +
Chr2	stalkie_big_nohaplotig	CDS	2933613	2933985	.	+	1	Parent=FBgn0050375.1.mrna1;Target=FBgn0050375.1 846 1218 +
Chr2	gffcl	locus	2996609	2997512	.	-	.	ID=RLOC_00014113;geneIDs=comp133556_c0_seq1.path1;transcripts=comp133556_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	2996609	2997512	.	-	.	ID=comp133556_c0_seq1.mrna1;geneID=comp133556_c0_seq1.path1;Name=comp133556_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.4;matches=834;mismatches=8;indels=32;unknowns=0;locus=RLOC_00014113
Chr2	stalkie_big_nohaplotig	exon	2996609	2997365	98	-	.	Parent=comp133556_c0_seq1.mrna1;Target=comp133556_c0_seq1 885 129 .
Chr2	stalkie_big_nohaplotig	exon	2997392	2997401	100	-	.	Parent=comp133556_c0_seq1.mrna1;Target=comp133556_c0_seq1 122 113 .
Chr2	stalkie_big_nohaplotig	exon	2997438	2997512	70	-	.	Parent=comp133556_c0_seq1.mrna1;Target=comp133556_c0_seq1 107 1 .
Chr2	stalkie_big_nohaplotig	CDS	2997329	2997365	.	-	0	Parent=comp133556_c0_seq1.mrna1;Target=comp133556_c0_seq1 165 129 .
Chr2	stalkie_big_nohaplotig	CDS	2997392	2997401	.	-	1	Parent=comp133556_c0_seq1.mrna1;Target=comp133556_c0_seq1 122 113 .
Chr2	stalkie_big_nohaplotig	CDS	2997438	2997448	.	-	0	Parent=comp133556_c0_seq1.mrna1;Target=comp133556_c0_seq1 107 97 .
Chr2	gffcl	locus	3042437	3043098	.	+	.	ID=RLOC_00014114;geneIDs=comp81402_c0_seq1.path1;transcripts=comp81402_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3042437	3043098	.	+	.	ID=comp81402_c0_seq1.mrna1;geneID=comp81402_c0_seq1.path1;Name=comp81402_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=661;mismatches=1;indels=17;unknowns=0;Target=comp81402_c0_seq1 679 1 .;CDS_Target=comp81402_c0_seq1 471 283 .;locus=RLOC_00014114
Chr2	stalkie_big_nohaplotig	exon	3042437	3043098	97	+	.	Parent=comp81402_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	3042711	3042899	.	+	0	Parent=comp81402_c0_seq1.mrna1
Chr2	gffcl	locus	3065196	3066390	.	-	.	ID=RLOC_00014115;geneIDs=comp146739_c0_seq1.path1;transcripts=comp146739_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3065196	3066390	.	-	.	ID=comp146739_c0_seq1.mrna1;geneID=comp146739_c0_seq1.path1;Name=comp146739_c0_seq1;Dir=sensecoverage=99.9;identity=99.8;matches=1128;mismatches=2;indels=0;unknowns=0;Target=comp146739_c0_seq1 111 881 +;locus=RLOC_00014115
Chr2	stalkie_big_nohaplotig	exon	3065196	3065400	99	-	.	Parent=comp146739_c0_seq1.mrna1;Target=comp146739_c0_seq1 927 1131 +
Chr2	stalkie_big_nohaplotig	exon	3065466	3066390	99	-	.	Parent=comp146739_c0_seq1.mrna1;Target=comp146739_c0_seq1 2 926 +
Chr2	stalkie_big_nohaplotig	CDS	3065511	3066281	.	-	0	Parent=comp146739_c0_seq1.mrna1
Chr2	gffcl	locus	3066651	3067490	.	-	.	ID=RLOC_00014116;geneIDs=ORF2577.path1;transcripts=ORF2577.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3066651	3067490	.	-	.	ID=ORF2577.mrna1;geneID=ORF2577.path1;Name=ORF2577;Dir=indeterminatecoverage=100.0;identity=100.0;matches=840;mismatches=0;indels=0;unknowns=0;Target=ORF2577 840 1 .;locus=RLOC_00014116
Chr2	stalkie_big_nohaplotig	exon	3066651	3067490	100	-	.	Parent=ORF2577.mrna1
Chr2	stalkie_big_nohaplotig	CDS	3066651	3067490	.	-	0	Parent=ORF2577.mrna1
Chr2	gffcl	locus	3067900	3068751	.	-	.	ID=RLOC_00014117;geneIDs=ORF2482.path1;transcripts=ORF2482.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3067900	3068751	.	-	.	ID=ORF2482.mrna1;geneID=ORF2482.path1;Name=ORF2482;Dir=indeterminatecoverage=100.0;identity=99.9;matches=851;mismatches=1;indels=0;unknowns=0;Target=ORF2482 852 1 .;locus=RLOC_00014117
Chr2	stalkie_big_nohaplotig	exon	3067900	3068751	99	-	.	Parent=ORF2482.mrna1
Chr2	stalkie_big_nohaplotig	CDS	3067900	3068751	.	-	0	Parent=ORF2482.mrna1
Chr2	gffcl	locus	3070375	3071846	.	-	.	ID=RLOC_00014118;geneIDs=comp135363_c0_seq1.path1;transcripts=comp135363_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3070375	3071846	.	-	.	ID=comp135363_c0_seq1.mrna1;geneID=comp135363_c0_seq1.path1;Name=comp135363_c0_seq1;Dir=indeterminatecoverage=99.4;identity=100.0;matches=1472;mismatches=0;indels=0;unknowns=0;Target=comp135363_c0_seq1 1481 10 .;CDS_Target=comp135363_c0_seq1 1015 176 .;locus=RLOC_00014118
Chr2	stalkie_big_nohaplotig	exon	3070375	3071846	100	-	.	Parent=comp135363_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	3070841	3071680	.	-	0	Parent=comp135363_c0_seq1.mrna1
Chr2	gffcl	locus	3071902	3074836	.	-	.	ID=RLOC_00014119;geneIDs=comp161044_c0_seq1.path1;transcripts=comp161044_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3071902	3074836	.	-	.	ID=comp161044_c0_seq1.mrna1;geneID=comp161044_c0_seq1.path1;Name=comp161044_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=2903;mismatches=32;indels=0;unknowns=0;Target=comp161044_c0_seq1 2935 1 .;CDS_Target=comp161044_c0_seq1 1286 303 .;locus=RLOC_00014119
Chr2	stalkie_big_nohaplotig	exon	3071902	3074836	98	-	.	Parent=comp161044_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	3073551	3074534	.	-	0	Parent=comp161044_c0_seq1.mrna1
Chr2	gffcl	locus	3075743	3142002	.	+	.	ID=RLOC_00014120;geneIDs=comp156307_c1_seq1.path1;transcripts=comp156307_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3075743	3142002	.	+	.	ID=comp156307_c1_seq1.mrna1;geneID=comp156307_c1_seq1.path1;Name=comp156307_c1_seq1;Dir=sensecoverage=100.0;identity=91.8;matches=1087;mismatches=27;indels=70;unknowns=0;Target=comp156307_c1_seq1 369 596 +;locus=RLOC_00014120
Chr2	stalkie_big_nohaplotig	exon	3075743	3076416	91	+	.	Parent=comp156307_c1_seq1.mrna1;Target=comp156307_c1_seq1 1 715 +
Chr2	stalkie_big_nohaplotig	exon	3141486	3141551	84	+	.	Parent=comp156307_c1_seq1.mrna1;Target=comp156307_c1_seq1 716 792 +
Chr2	stalkie_big_nohaplotig	exon	3141611	3142002	93	+	.	Parent=comp156307_c1_seq1.mrna1;Target=comp156307_c1_seq1 793 1166 +
Chr2	stalkie_big_nohaplotig	CDS	3076075	3076297	.	+	0	Parent=comp156307_c1_seq1.mrna1
Chr2	gffcl	locus	3127742	3128371	.	+	.	ID=RLOC_00014121;geneIDs=comp116923_c0_seq1.path1;transcripts=comp116923_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3127742	3128371	.	+	.	ID=comp116923_c0_seq1.mrna1;geneID=comp116923_c0_seq1.path1;Name=comp116923_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=629;mismatches=1;indels=0;unknowns=0;Target=comp116923_c0_seq1 630 1 .;CDS_Target=comp116923_c0_seq1 551 471 .;locus=RLOC_00014121
Chr2	stalkie_big_nohaplotig	exon	3127742	3128371	99	+	.	Parent=comp116923_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	3128212	3128292	.	+	0	Parent=comp116923_c0_seq1.mrna1
Chr2	gffcl	locus	3199501	3204953	.	+	.	ID=RLOC_00014122;geneIDs=FBgn0033292.2.path1;transcripts=FBgn0033292.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3199501	3204953	.	+	.	ID=FBgn0033292.2.mrna1;geneID=FBgn0033292.2.path1;Name=FBgn0033292.2;Dir=sensecoverage=100.0;identity=99.3;matches=1608;mismatches=12;indels=0;unknowns=0;locus=RLOC_00014122
Chr2	stalkie_big_nohaplotig	exon	3199501	3199720	100	+	.	Parent=FBgn0033292.2.mrna1;Target=FBgn0033292.2 1 220 +
Chr2	stalkie_big_nohaplotig	exon	3202168	3202277	100	+	.	Parent=FBgn0033292.2.mrna1;Target=FBgn0033292.2 221 330 +
Chr2	stalkie_big_nohaplotig	exon	3202536	3202815	99	+	.	Parent=FBgn0033292.2.mrna1;Target=FBgn0033292.2 331 610 +
Chr2	stalkie_big_nohaplotig	exon	3202938	3203007	98	+	.	Parent=FBgn0033292.2.mrna1;Target=FBgn0033292.2 611 680 +
Chr2	stalkie_big_nohaplotig	exon	3203083	3203209	96	+	.	Parent=FBgn0033292.2.mrna1;Target=FBgn0033292.2 681 807 +
Chr2	stalkie_big_nohaplotig	exon	3203286	3203438	98	+	.	Parent=FBgn0033292.2.mrna1;Target=FBgn0033292.2 808 960 +
Chr2	stalkie_big_nohaplotig	exon	3203491	3203746	99	+	.	Parent=FBgn0033292.2.mrna1;Target=FBgn0033292.2 961 1216 +
Chr2	stalkie_big_nohaplotig	exon	3203837	3204025	99	+	.	Parent=FBgn0033292.2.mrna1;Target=FBgn0033292.2 1217 1405 +
Chr2	stalkie_big_nohaplotig	exon	3204739	3204953	100	+	.	Parent=FBgn0033292.2.mrna1;Target=FBgn0033292.2 1406 1620 +
Chr2	stalkie_big_nohaplotig	CDS	3199501	3199720	.	+	0	Parent=FBgn0033292.2.mrna1;Target=FBgn0033292.2 1 220 +
Chr2	stalkie_big_nohaplotig	CDS	3202168	3202277	.	+	2	Parent=FBgn0033292.2.mrna1;Target=FBgn0033292.2 221 330 +
Chr2	stalkie_big_nohaplotig	CDS	3202536	3202815	.	+	0	Parent=FBgn0033292.2.mrna1;Target=FBgn0033292.2 331 610 +
Chr2	stalkie_big_nohaplotig	CDS	3202938	3203007	.	+	2	Parent=FBgn0033292.2.mrna1;Target=FBgn0033292.2 611 680 +
Chr2	stalkie_big_nohaplotig	CDS	3203083	3203209	.	+	1	Parent=FBgn0033292.2.mrna1;Target=FBgn0033292.2 681 807 +
Chr2	stalkie_big_nohaplotig	CDS	3203286	3203438	.	+	0	Parent=FBgn0033292.2.mrna1;Target=FBgn0033292.2 808 960 +
Chr2	stalkie_big_nohaplotig	CDS	3203491	3203746	.	+	0	Parent=FBgn0033292.2.mrna1;Target=FBgn0033292.2 961 1216 +
Chr2	stalkie_big_nohaplotig	CDS	3203837	3204025	.	+	2	Parent=FBgn0033292.2.mrna1;Target=FBgn0033292.2 1217 1405 +
Chr2	stalkie_big_nohaplotig	CDS	3204739	3204953	.	+	2	Parent=FBgn0033292.2.mrna1;Target=FBgn0033292.2 1406 1620 +
Chr2	gffcl	locus	3205157	3220420	.	-	.	ID=RLOC_00014123;geneIDs=FBgn0015034.1.path1;transcripts=FBgn0015034.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3205157	3220420	.	-	.	ID=FBgn0015034.1.mrna1;geneID=FBgn0015034.1.path1;Name=FBgn0015034.1;Dir=sensecoverage=100.0;identity=99.5;matches=1561;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014123
Chr2	stalkie_big_nohaplotig	exon	3205157	3205359	100	-	.	Parent=FBgn0015034.1.mrna1;Target=FBgn0015034.1 1367 1569 +
Chr2	stalkie_big_nohaplotig	exon	3205436	3205615	100	-	.	Parent=FBgn0015034.1.mrna1;Target=FBgn0015034.1 1187 1366 +
Chr2	stalkie_big_nohaplotig	exon	3205685	3205925	99	-	.	Parent=FBgn0015034.1.mrna1;Target=FBgn0015034.1 946 1186 +
Chr2	stalkie_big_nohaplotig	exon	3206548	3206724	100	-	.	Parent=FBgn0015034.1.mrna1;Target=FBgn0015034.1 769 945 +
Chr2	stalkie_big_nohaplotig	exon	3206785	3206911	100	-	.	Parent=FBgn0015034.1.mrna1;Target=FBgn0015034.1 642 768 +
Chr2	stalkie_big_nohaplotig	exon	3206989	3207058	100	-	.	Parent=FBgn0015034.1.mrna1;Target=FBgn0015034.1 572 641 +
Chr2	stalkie_big_nohaplotig	exon	3207141	3207420	99	-	.	Parent=FBgn0015034.1.mrna1;Target=FBgn0015034.1 292 571 +
Chr2	stalkie_big_nohaplotig	exon	3207471	3207580	100	-	.	Parent=FBgn0015034.1.mrna1;Target=FBgn0015034.1 182 291 +
Chr2	stalkie_big_nohaplotig	exon	3220240	3220420	97	-	.	Parent=FBgn0015034.1.mrna1;Target=FBgn0015034.1 1 181 +
Chr2	stalkie_big_nohaplotig	CDS	3205157	3205359	.	-	2	Parent=FBgn0015034.1.mrna1;Target=FBgn0015034.1 1367 1569 +
Chr2	stalkie_big_nohaplotig	CDS	3205436	3205615	.	-	2	Parent=FBgn0015034.1.mrna1;Target=FBgn0015034.1 1187 1366 +
Chr2	stalkie_big_nohaplotig	CDS	3205685	3205925	.	-	0	Parent=FBgn0015034.1.mrna1;Target=FBgn0015034.1 946 1186 +
Chr2	stalkie_big_nohaplotig	CDS	3206548	3206724	.	-	0	Parent=FBgn0015034.1.mrna1;Target=FBgn0015034.1 769 945 +
Chr2	stalkie_big_nohaplotig	CDS	3206785	3206911	.	-	1	Parent=FBgn0015034.1.mrna1;Target=FBgn0015034.1 642 768 +
Chr2	stalkie_big_nohaplotig	CDS	3206989	3207058	.	-	2	Parent=FBgn0015034.1.mrna1;Target=FBgn0015034.1 572 641 +
Chr2	stalkie_big_nohaplotig	CDS	3207141	3207420	.	-	0	Parent=FBgn0015034.1.mrna1;Target=FBgn0015034.1 292 571 +
Chr2	stalkie_big_nohaplotig	CDS	3207471	3207580	.	-	2	Parent=FBgn0015034.1.mrna1;Target=FBgn0015034.1 182 291 +
Chr2	stalkie_big_nohaplotig	CDS	3220240	3220420	.	-	0	Parent=FBgn0015034.1.mrna1;Target=FBgn0015034.1 1 181 +
Chr2	gffcl	locus	3208144	3208576	.	-	.	ID=RLOC_00014124;geneIDs=FBgn0002533.4.path1;transcripts=FBgn0002533.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3208144	3208576	.	-	.	ID=FBgn0002533.4.mrna1;geneID=FBgn0002533.4.path1;Name=FBgn0002533.4;Dir=sensecoverage=100.0;identity=100.0;matches=372;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014124
Chr2	stalkie_big_nohaplotig	exon	3208144	3208485	100	-	.	Parent=FBgn0002533.4.mrna1;Target=FBgn0002533.4 31 372 +
Chr2	stalkie_big_nohaplotig	exon	3208547	3208576	100	-	.	Parent=FBgn0002533.4.mrna1;Target=FBgn0002533.4 1 30 +
Chr2	stalkie_big_nohaplotig	CDS	3208144	3208485	.	-	0	Parent=FBgn0002533.4.mrna1;Target=FBgn0002533.4 31 372 +
Chr2	stalkie_big_nohaplotig	CDS	3208547	3208576	.	-	0	Parent=FBgn0002533.4.mrna1;Target=FBgn0002533.4 1 30 +
Chr2	gffcl	locus	3210980	3211469	.	-	.	ID=RLOC_00014125;geneIDs=FBgn0002533.1.path1;transcripts=FBgn0002533.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3210980	3211469	.	-	.	ID=FBgn0002533.1.mrna1;geneID=FBgn0002533.1.path1;Name=FBgn0002533.1;Dir=sensecoverage=100.0;identity=99.4;matches=361;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014125
Chr2	stalkie_big_nohaplotig	exon	3210980	3211318	99	-	.	Parent=FBgn0002533.1.mrna1;Target=FBgn0002533.1 25 363 +
Chr2	stalkie_big_nohaplotig	exon	3211446	3211469	100	-	.	Parent=FBgn0002533.1.mrna1;Target=FBgn0002533.1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	3210980	3211318	.	-	0	Parent=FBgn0002533.1.mrna1;Target=FBgn0002533.1 25 363 +
Chr2	stalkie_big_nohaplotig	CDS	3211446	3211469	.	-	0	Parent=FBgn0002533.1.mrna1;Target=FBgn0002533.1 1 24 +
Chr2	gffcl	locus	3224817	3227614	.	+	.	ID=RLOC_00014126;geneIDs=comp159387_c0_seq1.path1;transcripts=comp159387_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3224817	3227614	.	+	.	ID=comp159387_c0_seq1.mrna1;geneID=comp159387_c0_seq1.path1;Name=comp159387_c0_seq1;Dir=antisensecoverage=100.0;identity=94.0;matches=2356;mismatches=80;indels=70;unknowns=0;locus=RLOC_00014126
Chr2	stalkie_big_nohaplotig	exon	3224817	3224930	98	+	.	Parent=comp159387_c0_seq1.mrna1;Target=comp159387_c0_seq1 2377 2490 -
Chr2	stalkie_big_nohaplotig	exon	3224993	3226917	95	+	.	Parent=comp159387_c0_seq1.mrna1;Target=comp159387_c0_seq1 421 2376 -
Chr2	stalkie_big_nohaplotig	exon	3227186	3227423	82	+	.	Parent=comp159387_c0_seq1.mrna1;Target=comp159387_c0_seq1 176 420 -
Chr2	stalkie_big_nohaplotig	exon	3227440	3227614	94	+	.	Parent=comp159387_c0_seq1.mrna1;Target=comp159387_c0_seq1 1 175 -
Chr2	stalkie_big_nohaplotig	CDS	3224913	3224930	.	+	0	Parent=comp159387_c0_seq1.mrna1;Target=comp159387_c0_seq1 2377 2394 .
Chr2	stalkie_big_nohaplotig	CDS	3224993	3225457	.	+	0	Parent=comp159387_c0_seq1.mrna1;Target=comp159387_c0_seq1 1912 2376 .
Chr2	gffcl	locus	3228351	3274814	.	-	.	ID=RLOC_00014127;geneIDs=FBgn0028836.1.path1;transcripts=FBgn0028836.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3228351	3274814	.	-	.	ID=FBgn0028836.1.mrna1;geneID=FBgn0028836.1.path1;Name=FBgn0028836.1;Dir=sensecoverage=100.0;identity=99.3;matches=915;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014127
Chr2	stalkie_big_nohaplotig	exon	3228351	3228370	100	-	.	Parent=FBgn0028836.1.mrna1;Target=FBgn0028836.1 902 921 +
Chr2	stalkie_big_nohaplotig	exon	3228436	3228574	100	-	.	Parent=FBgn0028836.1.mrna1;Target=FBgn0028836.1 763 901 +
Chr2	stalkie_big_nohaplotig	exon	3228660	3228880	99	-	.	Parent=FBgn0028836.1.mrna1;Target=FBgn0028836.1 542 762 +
Chr2	stalkie_big_nohaplotig	exon	3274222	3274474	98	-	.	Parent=FBgn0028836.1.mrna1;Target=FBgn0028836.1 289 541 +
Chr2	stalkie_big_nohaplotig	exon	3274527	3274814	100	-	.	Parent=FBgn0028836.1.mrna1;Target=FBgn0028836.1 1 288 +
Chr2	stalkie_big_nohaplotig	CDS	3228351	3228370	.	-	2	Parent=FBgn0028836.1.mrna1;Target=FBgn0028836.1 902 921 +
Chr2	stalkie_big_nohaplotig	CDS	3228436	3228574	.	-	0	Parent=FBgn0028836.1.mrna1;Target=FBgn0028836.1 763 901 +
Chr2	stalkie_big_nohaplotig	CDS	3228660	3228880	.	-	2	Parent=FBgn0028836.1.mrna1;Target=FBgn0028836.1 542 762 +
Chr2	stalkie_big_nohaplotig	CDS	3274222	3274474	.	-	0	Parent=FBgn0028836.1.mrna1;Target=FBgn0028836.1 289 541 +
Chr2	stalkie_big_nohaplotig	CDS	3274527	3274814	.	-	0	Parent=FBgn0028836.1.mrna1;Target=FBgn0028836.1 1 288 +
Chr2	gffcl	locus	3276391	3279859	.	+	.	ID=RLOC_00014128;geneIDs=FBgn0015295.1.path1;transcripts=FBgn0015295.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3276391	3279859	.	+	.	ID=FBgn0015295.1.mrna1;geneID=FBgn0015295.1.path1;Name=FBgn0015295.1;Dir=sensecoverage=100.0;identity=98.9;matches=3012;mismatches=10;indels=25;unknowns=0;locus=RLOC_00014128
Chr2	stalkie_big_nohaplotig	exon	3276391	3276511	100	+	.	Parent=FBgn0015295.1.mrna1;Target=FBgn0015295.1 1 121 +
Chr2	stalkie_big_nohaplotig	exon	3276578	3276657	98	+	.	Parent=FBgn0015295.1.mrna1;Target=FBgn0015295.1 122 201 +
Chr2	stalkie_big_nohaplotig	exon	3276731	3277141	100	+	.	Parent=FBgn0015295.1.mrna1;Target=FBgn0015295.1 202 612 +
Chr2	stalkie_big_nohaplotig	exon	3277205	3277768	99	+	.	Parent=FBgn0015295.1.mrna1;Target=FBgn0015295.1 613 1176 +
Chr2	stalkie_big_nohaplotig	exon	3277829	3278556	96	+	.	Parent=FBgn0015295.1.mrna1;Target=FBgn0015295.1 1177 1913 +
Chr2	stalkie_big_nohaplotig	exon	3278612	3279243	99	+	.	Parent=FBgn0015295.1.mrna1;Target=FBgn0015295.1 1914 2545 +
Chr2	stalkie_big_nohaplotig	exon	3279307	3279478	100	+	.	Parent=FBgn0015295.1.mrna1;Target=FBgn0015295.1 2546 2717 +
Chr2	stalkie_big_nohaplotig	exon	3279538	3279859	100	+	.	Parent=FBgn0015295.1.mrna1;Target=FBgn0015295.1 2718 3039 +
Chr2	stalkie_big_nohaplotig	CDS	3276391	3276511	.	+	0	Parent=FBgn0015295.1.mrna1;Target=FBgn0015295.1 1 121 +
Chr2	stalkie_big_nohaplotig	CDS	3276578	3276657	.	+	2	Parent=FBgn0015295.1.mrna1;Target=FBgn0015295.1 122 201 +
Chr2	stalkie_big_nohaplotig	CDS	3276731	3277141	.	+	0	Parent=FBgn0015295.1.mrna1;Target=FBgn0015295.1 202 612 +
Chr2	stalkie_big_nohaplotig	CDS	3277205	3277768	.	+	0	Parent=FBgn0015295.1.mrna1;Target=FBgn0015295.1 613 1176 +
Chr2	stalkie_big_nohaplotig	CDS	3277829	3278556	.	+	0	Parent=FBgn0015295.1.mrna1;Target=FBgn0015295.1 1177 1913 +
Chr2	stalkie_big_nohaplotig	CDS	3278612	3279243	.	+	1	Parent=FBgn0015295.1.mrna1;Target=FBgn0015295.1 1914 2545 +
Chr2	stalkie_big_nohaplotig	CDS	3279307	3279478	.	+	2	Parent=FBgn0015295.1.mrna1;Target=FBgn0015295.1 2546 2717 +
Chr2	stalkie_big_nohaplotig	CDS	3279538	3279859	.	+	1	Parent=FBgn0015295.1.mrna1;Target=FBgn0015295.1 2718 3039 +
Chr2	gffcl	locus	3284055	3284594	.	-	.	ID=RLOC_00014129;geneIDs=comp147817_c0_seq1.path1;transcripts=comp147817_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3284055	3284594	.	-	.	ID=comp147817_c0_seq1.mrna1;geneID=comp147817_c0_seq1.path1;Name=comp147817_c0_seq1;Dir=indeterminatecoverage=91.7;identity=95.4;matches=515;mismatches=15;indels=10;unknowns=0;Target=comp147817_c0_seq1 543 14 .;CDS_Target=comp147817_c0_seq1 291 157 .;locus=RLOC_00014129
Chr2	stalkie_big_nohaplotig	exon	3284055	3284594	95	-	.	Parent=comp147817_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	3284317	3284451	.	-	0	Parent=comp147817_c0_seq1.mrna1
Chr2	gffcl	locus	3287150	3288547	.	+	.	ID=RLOC_00014130;geneIDs=FBgn0262166.1.path1;transcripts=FBgn0262166.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3287150	3288547	.	+	.	ID=FBgn0262166.1.mrna1;geneID=FBgn0262166.1.path1;Name=FBgn0262166.1;Dir=sensecoverage=100.0;identity=99.9;matches=1334;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014130
Chr2	stalkie_big_nohaplotig	exon	3287150	3288235	99	+	.	Parent=FBgn0262166.1.mrna1;Target=FBgn0262166.1 1 1086 +
Chr2	stalkie_big_nohaplotig	exon	3288299	3288547	100	+	.	Parent=FBgn0262166.1.mrna1;Target=FBgn0262166.1 1087 1335 +
Chr2	stalkie_big_nohaplotig	CDS	3287150	3288235	.	+	0	Parent=FBgn0262166.1.mrna1;Target=FBgn0262166.1 1 1086 +
Chr2	stalkie_big_nohaplotig	CDS	3288299	3288547	.	+	0	Parent=FBgn0262166.1.mrna1;Target=FBgn0262166.1 1087 1335 +
Chr2	gffcl	locus	3289305	3295836	.	-	.	ID=RLOC_00014131;geneIDs=FBgn0034087.1.path1;transcripts=FBgn0034087.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3289305	3295836	.	-	.	ID=FBgn0034087.1.mrna1;geneID=FBgn0034087.1.path1;Name=FBgn0034087.1;Dir=sensecoverage=100.0;identity=99.8;matches=4226;mismatches=7;indels=0;unknowns=0;locus=RLOC_00014131
Chr2	stalkie_big_nohaplotig	exon	3289305	3289491	100	-	.	Parent=FBgn0034087.1.mrna1;Target=FBgn0034087.1 4047 4233 +
Chr2	stalkie_big_nohaplotig	exon	3289550	3289761	100	-	.	Parent=FBgn0034087.1.mrna1;Target=FBgn0034087.1 3835 4046 +
Chr2	stalkie_big_nohaplotig	exon	3289823	3290038	100	-	.	Parent=FBgn0034087.1.mrna1;Target=FBgn0034087.1 3619 3834 +
Chr2	stalkie_big_nohaplotig	exon	3290104	3290229	100	-	.	Parent=FBgn0034087.1.mrna1;Target=FBgn0034087.1 3493 3618 +
Chr2	stalkie_big_nohaplotig	exon	3290299	3291130	99	-	.	Parent=FBgn0034087.1.mrna1;Target=FBgn0034087.1 2661 3492 +
Chr2	stalkie_big_nohaplotig	exon	3291190	3292548	99	-	.	Parent=FBgn0034087.1.mrna1;Target=FBgn0034087.1 1302 2660 +
Chr2	stalkie_big_nohaplotig	exon	3292603	3293746	99	-	.	Parent=FBgn0034087.1.mrna1;Target=FBgn0034087.1 158 1301 +
Chr2	stalkie_big_nohaplotig	exon	3295680	3295836	100	-	.	Parent=FBgn0034087.1.mrna1;Target=FBgn0034087.1 1 157 +
Chr2	stalkie_big_nohaplotig	CDS	3289305	3289491	.	-	1	Parent=FBgn0034087.1.mrna1;Target=FBgn0034087.1 4047 4233 +
Chr2	stalkie_big_nohaplotig	CDS	3289550	3289761	.	-	0	Parent=FBgn0034087.1.mrna1;Target=FBgn0034087.1 3835 4046 +
Chr2	stalkie_big_nohaplotig	CDS	3289823	3290038	.	-	0	Parent=FBgn0034087.1.mrna1;Target=FBgn0034087.1 3619 3834 +
Chr2	stalkie_big_nohaplotig	CDS	3290104	3290229	.	-	0	Parent=FBgn0034087.1.mrna1;Target=FBgn0034087.1 3493 3618 +
Chr2	stalkie_big_nohaplotig	CDS	3290299	3291130	.	-	1	Parent=FBgn0034087.1.mrna1;Target=FBgn0034087.1 2661 3492 +
Chr2	stalkie_big_nohaplotig	CDS	3291190	3292548	.	-	1	Parent=FBgn0034087.1.mrna1;Target=FBgn0034087.1 1302 2660 +
Chr2	stalkie_big_nohaplotig	CDS	3292603	3293746	.	-	2	Parent=FBgn0034087.1.mrna1;Target=FBgn0034087.1 158 1301 +
Chr2	stalkie_big_nohaplotig	CDS	3295680	3295836	.	-	0	Parent=FBgn0034087.1.mrna1;Target=FBgn0034087.1 1 157 +
Chr2	gffcl	locus	3297590	3298328	.	+	.	ID=RLOC_00014132;geneIDs=FBgn0034086.1.path1;transcripts=FBgn0034086.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3297590	3298328	.	+	.	ID=FBgn0034086.1.mrna1;geneID=FBgn0034086.1.path1;Name=FBgn0034086.1;Dir=sensecoverage=100.0;identity=100.0;matches=684;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014132
Chr2	stalkie_big_nohaplotig	exon	3297590	3297778	100	+	.	Parent=FBgn0034086.1.mrna1;Target=FBgn0034086.1 1 189 +
Chr2	stalkie_big_nohaplotig	exon	3297834	3298328	100	+	.	Parent=FBgn0034086.1.mrna1;Target=FBgn0034086.1 190 684 +
Chr2	stalkie_big_nohaplotig	CDS	3297590	3297778	.	+	0	Parent=FBgn0034086.1.mrna1;Target=FBgn0034086.1 1 189 +
Chr2	stalkie_big_nohaplotig	CDS	3297834	3298328	.	+	0	Parent=FBgn0034086.1.mrna1;Target=FBgn0034086.1 190 684 +
Chr2	gffcl	locus	3307702	3309762	.	+	.	ID=RLOC_00014134;geneIDs=comp150122_c0_seq1.path1;transcripts=comp150122_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3307702	3309762	.	+	.	ID=comp150122_c0_seq1.mrna1;geneID=comp150122_c0_seq1.path1;Name=comp150122_c0_seq1;Dir=antisensecoverage=100.0;identity=98.8;matches=414;mismatches=5;indels=0;unknowns=0;Target=comp150122_c0_seq1 280 417 .;locus=RLOC_00014134
Chr2	stalkie_big_nohaplotig	exon	3307702	3307935	97	+	.	Parent=comp150122_c0_seq1.mrna1;Target=comp150122_c0_seq1 186 419 -
Chr2	stalkie_big_nohaplotig	exon	3309578	3309762	100	+	.	Parent=comp150122_c0_seq1.mrna1;Target=comp150122_c0_seq1 1 185 -
Chr2	stalkie_big_nohaplotig	CDS	3307704	3307841	.	+	0	Parent=comp150122_c0_seq1.mrna1
Chr2	gffcl	locus	3310092	3317992	.	+	.	ID=RLOC_00014135;geneIDs=FBgn0034085.1.path1;transcripts=FBgn0034085.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3310092	3317992	.	+	.	ID=FBgn0034085.1.mrna1;geneID=FBgn0034085.1.path1;Name=FBgn0034085.1;Dir=sensecoverage=100.0;identity=100.0;matches=4402;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014135
Chr2	stalkie_big_nohaplotig	exon	3310092	3310236	100	+	.	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 1 145 +
Chr2	stalkie_big_nohaplotig	exon	3312139	3312271	100	+	.	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 146 278 +
Chr2	stalkie_big_nohaplotig	exon	3312334	3312446	100	+	.	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 279 391 +
Chr2	stalkie_big_nohaplotig	exon	3312864	3313136	100	+	.	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 392 664 +
Chr2	stalkie_big_nohaplotig	exon	3313200	3313439	100	+	.	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 665 904 +
Chr2	stalkie_big_nohaplotig	exon	3313508	3313666	100	+	.	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 905 1063 +
Chr2	stalkie_big_nohaplotig	exon	3313876	3314169	99	+	.	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 1064 1357 +
Chr2	stalkie_big_nohaplotig	exon	3314228	3314661	100	+	.	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 1358 1791 +
Chr2	stalkie_big_nohaplotig	exon	3314768	3314924	100	+	.	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 1792 1948 +
Chr2	stalkie_big_nohaplotig	exon	3315009	3315326	100	+	.	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 1949 2266 +
Chr2	stalkie_big_nohaplotig	exon	3315387	3315725	100	+	.	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 2267 2605 +
Chr2	stalkie_big_nohaplotig	exon	3315785	3315942	100	+	.	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 2606 2763 +
Chr2	stalkie_big_nohaplotig	exon	3316023	3316308	100	+	.	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 2764 3049 +
Chr2	stalkie_big_nohaplotig	exon	3316379	3316562	100	+	.	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 3050 3233 +
Chr2	stalkie_big_nohaplotig	exon	3316619	3316818	100	+	.	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 3234 3433 +
Chr2	stalkie_big_nohaplotig	exon	3316885	3316955	100	+	.	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 3434 3504 +
Chr2	stalkie_big_nohaplotig	exon	3317016	3317150	100	+	.	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 3505 3639 +
Chr2	stalkie_big_nohaplotig	exon	3317228	3317992	100	+	.	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 3640 4404 +
Chr2	stalkie_big_nohaplotig	CDS	3310092	3310236	.	+	0	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 1 145 +
Chr2	stalkie_big_nohaplotig	CDS	3312139	3312271	.	+	2	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 146 278 +
Chr2	stalkie_big_nohaplotig	CDS	3312334	3312446	.	+	1	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 279 391 +
Chr2	stalkie_big_nohaplotig	CDS	3312864	3313136	.	+	2	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 392 664 +
Chr2	stalkie_big_nohaplotig	CDS	3313200	3313439	.	+	2	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 665 904 +
Chr2	stalkie_big_nohaplotig	CDS	3313508	3313666	.	+	2	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 905 1063 +
Chr2	stalkie_big_nohaplotig	CDS	3313876	3314169	.	+	2	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 1064 1357 +
Chr2	stalkie_big_nohaplotig	CDS	3314228	3314661	.	+	2	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 1358 1791 +
Chr2	stalkie_big_nohaplotig	CDS	3314768	3314924	.	+	0	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 1792 1948 +
Chr2	stalkie_big_nohaplotig	CDS	3315009	3315326	.	+	2	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 1949 2266 +
Chr2	stalkie_big_nohaplotig	CDS	3315387	3315725	.	+	2	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 2267 2605 +
Chr2	stalkie_big_nohaplotig	CDS	3315785	3315942	.	+	2	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 2606 2763 +
Chr2	stalkie_big_nohaplotig	CDS	3316023	3316308	.	+	0	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 2764 3049 +
Chr2	stalkie_big_nohaplotig	CDS	3316379	3316562	.	+	2	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 3050 3233 +
Chr2	stalkie_big_nohaplotig	CDS	3316619	3316818	.	+	1	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 3234 3433 +
Chr2	stalkie_big_nohaplotig	CDS	3316885	3316955	.	+	2	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 3434 3504 +
Chr2	stalkie_big_nohaplotig	CDS	3317016	3317150	.	+	0	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 3505 3639 +
Chr2	stalkie_big_nohaplotig	CDS	3317228	3317992	.	+	0	Parent=FBgn0034085.1.mrna1;Target=FBgn0034085.1 3640 4404 +
Chr2	gffcl	locus	3319422	3320484	.	+	.	ID=RLOC_00014136;geneIDs=FBgn0034084.1.path1;transcripts=FBgn0034084.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3319422	3320484	.	+	.	ID=FBgn0034084.1.mrna1;geneID=FBgn0034084.1.path1;Name=FBgn0034084.1;Dir=sensecoverage=100.0;identity=99.3;matches=941;mismatches=7;indels=0;unknowns=0;locus=RLOC_00014136
Chr2	stalkie_big_nohaplotig	exon	3319422	3319460	97	+	.	Parent=FBgn0034084.1.mrna1;Target=FBgn0034084.1 1 39 +
Chr2	stalkie_big_nohaplotig	exon	3319523	3320091	99	+	.	Parent=FBgn0034084.1.mrna1;Target=FBgn0034084.1 40 608 +
Chr2	stalkie_big_nohaplotig	exon	3320145	3320484	98	+	.	Parent=FBgn0034084.1.mrna1;Target=FBgn0034084.1 609 948 +
Chr2	stalkie_big_nohaplotig	CDS	3319422	3319460	.	+	0	Parent=FBgn0034084.1.mrna1;Target=FBgn0034084.1 1 39 +
Chr2	stalkie_big_nohaplotig	CDS	3319523	3320091	.	+	0	Parent=FBgn0034084.1.mrna1;Target=FBgn0034084.1 40 608 +
Chr2	stalkie_big_nohaplotig	CDS	3320145	3320484	.	+	1	Parent=FBgn0034084.1.mrna1;Target=FBgn0034084.1 609 948 +
Chr2	gffcl	locus	3320549	3326597	.	-	.	ID=RLOC_00014137;geneIDs=FBgn0019938.1.path1;transcripts=FBgn0019938.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3320549	3326597	.	-	.	ID=FBgn0019938.1.mrna1;geneID=FBgn0019938.1.path1;Name=FBgn0019938.1;Dir=sensecoverage=100.0;identity=99.7;matches=4990;mismatches=17;indels=0;unknowns=0;locus=RLOC_00014137
Chr2	stalkie_big_nohaplotig	exon	3320549	3321106	99	-	.	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 4450 5007 +
Chr2	stalkie_big_nohaplotig	exon	3321167	3321324	100	-	.	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 4292 4449 +
Chr2	stalkie_big_nohaplotig	exon	3321381	3321631	100	-	.	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 4041 4291 +
Chr2	stalkie_big_nohaplotig	exon	3321685	3321874	100	-	.	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 3851 4040 +
Chr2	stalkie_big_nohaplotig	exon	3321930	3322878	99	-	.	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 2902 3850 +
Chr2	stalkie_big_nohaplotig	exon	3322936	3323221	100	-	.	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 2616 2901 +
Chr2	stalkie_big_nohaplotig	exon	3323272	3323438	100	-	.	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 2449 2615 +
Chr2	stalkie_big_nohaplotig	exon	3323501	3323659	99	-	.	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 2290 2448 +
Chr2	stalkie_big_nohaplotig	exon	3323724	3323876	100	-	.	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 2137 2289 +
Chr2	stalkie_big_nohaplotig	exon	3323954	3324037	100	-	.	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 2053 2136 +
Chr2	stalkie_big_nohaplotig	exon	3324093	3324316	100	-	.	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 1829 2052 +
Chr2	stalkie_big_nohaplotig	exon	3324382	3324722	98	-	.	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 1488 1828 +
Chr2	stalkie_big_nohaplotig	exon	3324793	3325013	100	-	.	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 1267 1487 +
Chr2	stalkie_big_nohaplotig	exon	3325074	3325217	98	-	.	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 1123 1266 +
Chr2	stalkie_big_nohaplotig	exon	3325290	3325644	99	-	.	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 768 1122 +
Chr2	stalkie_big_nohaplotig	exon	3325714	3325894	99	-	.	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 587 767 +
Chr2	stalkie_big_nohaplotig	exon	3325950	3326135	100	-	.	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 401 586 +
Chr2	stalkie_big_nohaplotig	exon	3326198	3326597	99	-	.	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 1 400 +
Chr2	stalkie_big_nohaplotig	CDS	3320549	3321106	.	-	0	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 4450 5007 +
Chr2	stalkie_big_nohaplotig	CDS	3321167	3321324	.	-	2	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 4292 4449 +
Chr2	stalkie_big_nohaplotig	CDS	3321381	3321631	.	-	1	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 4041 4291 +
Chr2	stalkie_big_nohaplotig	CDS	3321685	3321874	.	-	2	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 3851 4040 +
Chr2	stalkie_big_nohaplotig	CDS	3321930	3322878	.	-	0	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 2902 3850 +
Chr2	stalkie_big_nohaplotig	CDS	3322936	3323221	.	-	1	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 2616 2901 +
Chr2	stalkie_big_nohaplotig	CDS	3323272	3323438	.	-	0	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 2449 2615 +
Chr2	stalkie_big_nohaplotig	CDS	3323501	3323659	.	-	0	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 2290 2448 +
Chr2	stalkie_big_nohaplotig	CDS	3323724	3323876	.	-	0	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 2137 2289 +
Chr2	stalkie_big_nohaplotig	CDS	3323954	3324037	.	-	0	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 2053 2136 +
Chr2	stalkie_big_nohaplotig	CDS	3324093	3324316	.	-	2	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 1829 2052 +
Chr2	stalkie_big_nohaplotig	CDS	3324382	3324722	.	-	1	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 1488 1828 +
Chr2	stalkie_big_nohaplotig	CDS	3324793	3325013	.	-	0	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 1267 1487 +
Chr2	stalkie_big_nohaplotig	CDS	3325074	3325217	.	-	0	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 1123 1266 +
Chr2	stalkie_big_nohaplotig	CDS	3325290	3325644	.	-	1	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 768 1122 +
Chr2	stalkie_big_nohaplotig	CDS	3325714	3325894	.	-	2	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 587 767 +
Chr2	stalkie_big_nohaplotig	CDS	3325950	3326135	.	-	2	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 401 586 +
Chr2	stalkie_big_nohaplotig	CDS	3326198	3326597	.	-	0	Parent=FBgn0019938.1.mrna1;Target=FBgn0019938.1 1 400 +
Chr2	gffcl	locus	3333397	3335138	.	-	.	ID=RLOC_00014138;geneIDs=comp162214_c0_seq1.path1;transcripts=comp162214_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3333397	3335138	.	-	.	ID=comp162214_c0_seq1.mrna1;geneID=comp162214_c0_seq1.path1;Name=comp162214_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.8;matches=1711;mismatches=27;indels=66;unknowns=0;Target=comp162214_c0_seq1 1800 1 .;CDS_Target=comp162214_c0_seq1 1756 1637 .;locus=RLOC_00014138
Chr2	stalkie_big_nohaplotig	exon	3333397	3335138	94	-	.	Parent=comp162214_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	3333441	3333560	.	-	0	Parent=comp162214_c0_seq1.mrna1
Chr2	gffcl	locus	3337915	3364229	.	-	.	ID=RLOC_00014139;geneIDs=FBgn0020245.1.path1;transcripts=FBgn0020245.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3337915	3364229	.	-	.	ID=FBgn0020245.1.mrna1;geneID=FBgn0020245.1.path1;Name=FBgn0020245.1;Dir=sensecoverage=100.0;identity=99.8;matches=2469;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014139
Chr2	stalkie_big_nohaplotig	exon	3337915	3338020	99	-	.	Parent=FBgn0020245.1.mrna1;Target=FBgn0020245.1 2370 2475 +
Chr2	stalkie_big_nohaplotig	exon	3338151	3338467	99	-	.	Parent=FBgn0020245.1.mrna1;Target=FBgn0020245.1 2053 2369 +
Chr2	stalkie_big_nohaplotig	exon	3338559	3338969	99	-	.	Parent=FBgn0020245.1.mrna1;Target=FBgn0020245.1 1642 2052 +
Chr2	stalkie_big_nohaplotig	exon	3339032	3339182	99	-	.	Parent=FBgn0020245.1.mrna1;Target=FBgn0020245.1 1491 1641 +
Chr2	stalkie_big_nohaplotig	exon	3339241	3339344	100	-	.	Parent=FBgn0020245.1.mrna1;Target=FBgn0020245.1 1387 1490 +
Chr2	stalkie_big_nohaplotig	exon	3351723	3351842	100	-	.	Parent=FBgn0020245.1.mrna1;Target=FBgn0020245.1 1267 1386 +
Chr2	stalkie_big_nohaplotig	exon	3354057	3354183	99	-	.	Parent=FBgn0020245.1.mrna1;Target=FBgn0020245.1 1140 1266 +
Chr2	stalkie_big_nohaplotig	exon	3354316	3354390	100	-	.	Parent=FBgn0020245.1.mrna1;Target=FBgn0020245.1 1065 1139 +
Chr2	stalkie_big_nohaplotig	exon	3355523	3355675	100	-	.	Parent=FBgn0020245.1.mrna1;Target=FBgn0020245.1 912 1064 +
Chr2	stalkie_big_nohaplotig	exon	3363319	3364229	100	-	.	Parent=FBgn0020245.1.mrna1;Target=FBgn0020245.1 1 911 +
Chr2	stalkie_big_nohaplotig	CDS	3337915	3338020	.	-	1	Parent=FBgn0020245.1.mrna1;Target=FBgn0020245.1 2370 2475 +
Chr2	stalkie_big_nohaplotig	CDS	3338151	3338467	.	-	0	Parent=FBgn0020245.1.mrna1;Target=FBgn0020245.1 2053 2369 +
Chr2	stalkie_big_nohaplotig	CDS	3338559	3338969	.	-	0	Parent=FBgn0020245.1.mrna1;Target=FBgn0020245.1 1642 2052 +
Chr2	stalkie_big_nohaplotig	CDS	3339032	3339182	.	-	1	Parent=FBgn0020245.1.mrna1;Target=FBgn0020245.1 1491 1641 +
Chr2	stalkie_big_nohaplotig	CDS	3339241	3339344	.	-	0	Parent=FBgn0020245.1.mrna1;Target=FBgn0020245.1 1387 1490 +
Chr2	stalkie_big_nohaplotig	CDS	3351723	3351842	.	-	0	Parent=FBgn0020245.1.mrna1;Target=FBgn0020245.1 1267 1386 +
Chr2	stalkie_big_nohaplotig	CDS	3354057	3354183	.	-	1	Parent=FBgn0020245.1.mrna1;Target=FBgn0020245.1 1140 1266 +
Chr2	stalkie_big_nohaplotig	CDS	3354316	3354390	.	-	1	Parent=FBgn0020245.1.mrna1;Target=FBgn0020245.1 1065 1139 +
Chr2	stalkie_big_nohaplotig	CDS	3355523	3355675	.	-	1	Parent=FBgn0020245.1.mrna1;Target=FBgn0020245.1 912 1064 +
Chr2	stalkie_big_nohaplotig	CDS	3363319	3364229	.	-	0	Parent=FBgn0020245.1.mrna1;Target=FBgn0020245.1 1 911 +
Chr2	gffcl	locus	3347336	3350765	.	+	.	ID=RLOC_00014140;geneIDs=FBgn0010397.1.path1;transcripts=FBgn0010397.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3347336	3350765	.	+	.	ID=FBgn0010397.1.mrna1;geneID=FBgn0010397.1.path1;Name=FBgn0010397.1;Dir=sensecoverage=99.5;identity=99.7;matches=1840;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014140
Chr2	stalkie_big_nohaplotig	exon	3347336	3347724	99	+	.	Parent=FBgn0010397.1.mrna1;Target=FBgn0010397.1 10 398 +
Chr2	stalkie_big_nohaplotig	exon	3349098	3349692	99	+	.	Parent=FBgn0010397.1.mrna1;Target=FBgn0010397.1 399 993 +
Chr2	stalkie_big_nohaplotig	exon	3349761	3350486	99	+	.	Parent=FBgn0010397.1.mrna1;Target=FBgn0010397.1 994 1719 +
Chr2	stalkie_big_nohaplotig	exon	3350631	3350765	100	+	.	Parent=FBgn0010397.1.mrna1;Target=FBgn0010397.1 1720 1854 +
Chr2	stalkie_big_nohaplotig	CDS	3347336	3347724	.	+	0	Parent=FBgn0010397.1.mrna1;Target=FBgn0010397.1 10 398 +
Chr2	stalkie_big_nohaplotig	CDS	3349098	3349692	.	+	1	Parent=FBgn0010397.1.mrna1;Target=FBgn0010397.1 399 993 +
Chr2	stalkie_big_nohaplotig	CDS	3349761	3350486	.	+	0	Parent=FBgn0010397.1.mrna1;Target=FBgn0010397.1 994 1719 +
Chr2	stalkie_big_nohaplotig	CDS	3350631	3350765	.	+	0	Parent=FBgn0010397.1.mrna1;Target=FBgn0010397.1 1720 1854 +
Chr2	stalkie_big_nohaplotig	mRNA	4961317	4963553	.	-	.	ID=comp158661_c0_seq1.mrna1;geneID=comp158661_c0_seq1.path1;Name=comp158661_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=2221;mismatches=16;indels=2;unknowns=0;Target=comp158661_c0_seq1 2239 1 .;CDS_Target=comp158661_c0_seq1 1293 1087 .;locus=RLOC_00014141
Chr2	stalkie_big_nohaplotig	exon	4961317	4963553	99	-	.	Parent=comp158661_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4962261	4962467	.	-	0	Parent=comp158661_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4963832	4964597	.	-	.	ID=comp145077_c0_seq1.mrna1;geneID=comp145077_c0_seq1.path1;Name=comp145077_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=750;mismatches=10;indels=6;unknowns=0;Target=comp145077_c0_seq1 760 1 .;CDS_Target=comp145077_c0_seq1 211 125 .;locus=RLOC_00014141
Chr2	stalkie_big_nohaplotig	exon	4963832	4964597	97	-	.	Parent=comp145077_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4964387	4964473	.	-	0	Parent=comp145077_c0_seq1.mrna1
Chr2	gffcl	locus	3376720	3523482	.	+	.	ID=RLOC_00014142;geneIDs=comp149525_c0_seq1.path1;transcripts=comp149525_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3376720	3523482	.	+	.	ID=comp149525_c0_seq1.mrna1;geneID=comp149525_c0_seq1.path1;Name=comp149525_c0_seq1;Dir=indeterminatecoverage=86.9;identity=99.3;matches=455;mismatches=3;indels=0;unknowns=0;Target=comp149525_c0_seq1 271 113 .;locus=RLOC_00014142
Chr2	stalkie_big_nohaplotig	exon	3376720	3376725	100	+	.	Parent=comp149525_c0_seq1.mrna1;Target=comp149525_c0_seq1 75 70 .
Chr2	stalkie_big_nohaplotig	exon	3377164	3377172	88	+	.	Parent=comp149525_c0_seq1.mrna1;Target=comp149525_c0_seq1 84 76 .
Chr2	stalkie_big_nohaplotig	exon	3377476	3377479	100	+	.	Parent=comp149525_c0_seq1.mrna1;Target=comp149525_c0_seq1 88 85 .
Chr2	stalkie_big_nohaplotig	exon	3382208	3382211	100	+	.	Parent=comp149525_c0_seq1.mrna1;Target=comp149525_c0_seq1 92 89 .
Chr2	stalkie_big_nohaplotig	exon	3523048	3523482	99	+	.	Parent=comp149525_c0_seq1.mrna1;Target=comp149525_c0_seq1 527 93 .
Chr2	stalkie_big_nohaplotig	CDS	3523068	3523226	.	+	0	Parent=comp149525_c0_seq1.mrna1
Chr2	gffcl	locus	3381537	3384152	.	+	.	ID=RLOC_00014143;geneIDs=FBgn0000037.1.path1;transcripts=FBgn0000037.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3381537	3384152	.	+	.	ID=FBgn0000037.1.mrna1;geneID=FBgn0000037.1.path1;Name=FBgn0000037.1;Dir=sensecoverage=100.0;identity=99.9;matches=2043;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014143
Chr2	stalkie_big_nohaplotig	exon	3381537	3382173	100	+	.	Parent=FBgn0000037.1.mrna1;Target=FBgn0000037.1 1 637 +
Chr2	stalkie_big_nohaplotig	exon	3382241	3382538	99	+	.	Parent=FBgn0000037.1.mrna1;Target=FBgn0000037.1 638 935 +
Chr2	stalkie_big_nohaplotig	exon	3382597	3382774	100	+	.	Parent=FBgn0000037.1.mrna1;Target=FBgn0000037.1 936 1113 +
Chr2	stalkie_big_nohaplotig	exon	3382851	3382987	100	+	.	Parent=FBgn0000037.1.mrna1;Target=FBgn0000037.1 1114 1250 +
Chr2	stalkie_big_nohaplotig	exon	3383357	3384152	99	+	.	Parent=FBgn0000037.1.mrna1;Target=FBgn0000037.1 1251 2046 +
Chr2	stalkie_big_nohaplotig	CDS	3381537	3382173	.	+	0	Parent=FBgn0000037.1.mrna1;Target=FBgn0000037.1 1 637 +
Chr2	stalkie_big_nohaplotig	CDS	3382241	3382538	.	+	2	Parent=FBgn0000037.1.mrna1;Target=FBgn0000037.1 638 935 +
Chr2	stalkie_big_nohaplotig	CDS	3382597	3382774	.	+	1	Parent=FBgn0000037.1.mrna1;Target=FBgn0000037.1 936 1113 +
Chr2	stalkie_big_nohaplotig	CDS	3382851	3382987	.	+	0	Parent=FBgn0000037.1.mrna1;Target=FBgn0000037.1 1114 1250 +
Chr2	stalkie_big_nohaplotig	CDS	3383357	3384152	.	+	1	Parent=FBgn0000037.1.mrna1;Target=FBgn0000037.1 1251 2046 +
Chr2	gffcl	locus	3385018	3385668	.	+	.	ID=RLOC_00014144;geneIDs=comp148107_c0_seq1.path1;transcripts=comp148107_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3385018	3385668	.	+	.	ID=comp148107_c0_seq1.mrna1;geneID=comp148107_c0_seq1.path1;Name=comp148107_c0_seq1;Dir=indeterminatecoverage=96.3;identity=99.1;matches=647;mismatches=4;indels=2;unknowns=0;Target=comp148107_c0_seq1 662 10 .;CDS_Target=comp148107_c0_seq1 97 11 .;locus=RLOC_00014144
Chr2	stalkie_big_nohaplotig	exon	3385018	3385668	99	+	.	Parent=comp148107_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	3385019	3385105	.	+	0	Parent=comp148107_c0_seq1.mrna1
Chr2	gffcl	locus	3385714	3386086	.	-	.	ID=RLOC_00014145;geneIDs=comp117829_c0_seq1.path1;transcripts=comp117829_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3385714	3386086	.	-	.	ID=comp117829_c0_seq1.mrna1;geneID=comp117829_c0_seq1.path1;Name=comp117829_c0_seq1;Dir=indeterminatecoverage=92.8;identity=99.7;matches=372;mismatches=1;indels=0;unknowns=0;Target=comp117829_c0_seq1 390 18 .;CDS_Target=comp117829_c0_seq1 106 77 .;locus=RLOC_00014145
Chr2	stalkie_big_nohaplotig	exon	3385714	3386086	99	-	.	Parent=comp117829_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	3385998	3386027	.	-	0	Parent=comp117829_c0_seq1.mrna1
Chr2	gffcl	locus	3389316	3529654	.	+	.	ID=RLOC_00014146;geneIDs=FBgn0034049.1.path1,comp160588_c3_seq1.path1;transcripts=comp160588_c3_seq1.mrna1,FBgn0034049.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3389316	3529654	.	+	.	ID=comp160588_c3_seq1.mrna1;geneID=comp160588_c3_seq1.path1;Name=comp160588_c3_seq1;Dir=indeterminatecoverage=92.1;identity=93.5;matches=1455;mismatches=53;indels=48;unknowns=0;Target=comp160588_c3_seq1 1750 1619 .;locus=RLOC_00014146
Chr2	stalkie_big_nohaplotig	exon	3389316	3389323	100	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 147 140 .
Chr2	stalkie_big_nohaplotig	exon	3392452	3392453	100	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 149 148 .
Chr2	stalkie_big_nohaplotig	exon	3399649	3399652	100	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 153 150 .
Chr2	stalkie_big_nohaplotig	exon	3412094	3412102	100	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 162 154 .
Chr2	stalkie_big_nohaplotig	exon	3417449	3417458	100	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 213 204 .
Chr2	stalkie_big_nohaplotig	exon	3423786	3423790	100	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 218 214 .
Chr2	stalkie_big_nohaplotig	exon	3424862	3424869	100	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 226 219 .
Chr2	stalkie_big_nohaplotig	exon	3425520	3425529	90	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 236 227 .
Chr2	stalkie_big_nohaplotig	exon	3427788	3427798	100	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 247 237 .
Chr2	stalkie_big_nohaplotig	exon	3442923	3442930	100	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 272 265 .
Chr2	stalkie_big_nohaplotig	exon	3446862	3446873	100	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 284 273 .
Chr2	stalkie_big_nohaplotig	exon	3450224	3450231	100	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 292 285 .
Chr2	stalkie_big_nohaplotig	exon	3452174	3452202	13	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 317 314 .
Chr2	stalkie_big_nohaplotig	exon	3455117	3455124	100	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 325 318 .
Chr2	stalkie_big_nohaplotig	exon	3459255	3459263	100	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 334 326 .
Chr2	stalkie_big_nohaplotig	exon	3461298	3461306	100	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 343 335 .
Chr2	stalkie_big_nohaplotig	exon	3468824	3468827	100	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 347 344 .
Chr2	stalkie_big_nohaplotig	exon	3469879	3469886	75	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 355 348 .
Chr2	stalkie_big_nohaplotig	exon	3476883	3476885	100	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 358 356 .
Chr2	stalkie_big_nohaplotig	exon	3502807	3502817	100	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 369 359 .
Chr2	stalkie_big_nohaplotig	exon	3509728	3509737	90	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 379 370 .
Chr2	stalkie_big_nohaplotig	exon	3514836	3514846	90	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 390 380 .
Chr2	stalkie_big_nohaplotig	exon	3522677	3522762	55	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 471 391 .
Chr2	stalkie_big_nohaplotig	exon	3528399	3529654	97	+	.	Parent=comp160588_c3_seq1.mrna1;Target=comp160588_c3_seq1 1752 487 .
Chr2	stalkie_big_nohaplotig	CDS	3529521	3529652	.	+	0	Parent=comp160588_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3445212	3449545	.	+	.	ID=FBgn0034049.1.mrna1;geneID=FBgn0034049.1.path1;Name=FBgn0034049.1;Dir=sensecoverage=100.0;identity=99.4;matches=3951;mismatches=24;indels=0;unknowns=0;locus=RLOC_00014146
Chr2	stalkie_big_nohaplotig	exon	3445212	3445959	99	+	.	Parent=FBgn0034049.1.mrna1;Target=FBgn0034049.1 1 748 +
Chr2	stalkie_big_nohaplotig	exon	3446019	3447265	99	+	.	Parent=FBgn0034049.1.mrna1;Target=FBgn0034049.1 749 1995 +
Chr2	stalkie_big_nohaplotig	exon	3447333	3447497	100	+	.	Parent=FBgn0034049.1.mrna1;Target=FBgn0034049.1 1996 2160 +
Chr2	stalkie_big_nohaplotig	exon	3447554	3447833	99	+	.	Parent=FBgn0034049.1.mrna1;Target=FBgn0034049.1 2161 2440 +
Chr2	stalkie_big_nohaplotig	exon	3447889	3448670	99	+	.	Parent=FBgn0034049.1.mrna1;Target=FBgn0034049.1 2441 3222 +
Chr2	stalkie_big_nohaplotig	exon	3448730	3448965	99	+	.	Parent=FBgn0034049.1.mrna1;Target=FBgn0034049.1 3223 3458 +
Chr2	stalkie_big_nohaplotig	exon	3449029	3449545	98	+	.	Parent=FBgn0034049.1.mrna1;Target=FBgn0034049.1 3459 3975 +
Chr2	stalkie_big_nohaplotig	CDS	3445212	3445959	.	+	0	Parent=FBgn0034049.1.mrna1;Target=FBgn0034049.1 1 748 +
Chr2	stalkie_big_nohaplotig	CDS	3446019	3447265	.	+	2	Parent=FBgn0034049.1.mrna1;Target=FBgn0034049.1 749 1995 +
Chr2	stalkie_big_nohaplotig	CDS	3447333	3447497	.	+	0	Parent=FBgn0034049.1.mrna1;Target=FBgn0034049.1 1996 2160 +
Chr2	stalkie_big_nohaplotig	CDS	3447554	3447833	.	+	0	Parent=FBgn0034049.1.mrna1;Target=FBgn0034049.1 2161 2440 +
Chr2	stalkie_big_nohaplotig	CDS	3447889	3448670	.	+	2	Parent=FBgn0034049.1.mrna1;Target=FBgn0034049.1 2441 3222 +
Chr2	stalkie_big_nohaplotig	CDS	3448730	3448965	.	+	0	Parent=FBgn0034049.1.mrna1;Target=FBgn0034049.1 3223 3458 +
Chr2	stalkie_big_nohaplotig	CDS	3449029	3449545	.	+	1	Parent=FBgn0034049.1.mrna1;Target=FBgn0034049.1 3459 3975 +
Chr2	gffcl	locus	3390209	3416735	.	-	.	ID=RLOC_00014147;geneIDs=FBgn0004101.1.path1;transcripts=FBgn0004101.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3390209	3416735	.	-	.	ID=FBgn0004101.1.mrna1;geneID=FBgn0004101.1.path1;Name=FBgn0004101.1;Dir=sensecoverage=100.0;identity=99.9;matches=1438;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014147
Chr2	stalkie_big_nohaplotig	exon	3390209	3390417	99	-	.	Parent=FBgn0004101.1.mrna1;Target=FBgn0004101.1 1232 1440 +
Chr2	stalkie_big_nohaplotig	exon	3390476	3390803	100	-	.	Parent=FBgn0004101.1.mrna1;Target=FBgn0004101.1 904 1231 +
Chr2	stalkie_big_nohaplotig	exon	3412979	3413227	100	-	.	Parent=FBgn0004101.1.mrna1;Target=FBgn0004101.1 655 903 +
Chr2	stalkie_big_nohaplotig	exon	3416082	3416735	99	-	.	Parent=FBgn0004101.1.mrna1;Target=FBgn0004101.1 1 654 +
Chr2	stalkie_big_nohaplotig	CDS	3390209	3390417	.	-	2	Parent=FBgn0004101.1.mrna1;Target=FBgn0004101.1 1232 1440 +
Chr2	stalkie_big_nohaplotig	CDS	3390476	3390803	.	-	0	Parent=FBgn0004101.1.mrna1;Target=FBgn0004101.1 904 1231 +
Chr2	stalkie_big_nohaplotig	CDS	3412979	3413227	.	-	0	Parent=FBgn0004101.1.mrna1;Target=FBgn0004101.1 655 903 +
Chr2	stalkie_big_nohaplotig	CDS	3416082	3416735	.	-	0	Parent=FBgn0004101.1.mrna1;Target=FBgn0004101.1 1 654 +
Chr2	gffcl	locus	3397020	3408327	.	+	.	ID=RLOC_00014148;geneIDs=comp150155_c0_seq1.path1;transcripts=comp150155_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3397020	3408327	.	+	.	ID=comp150155_c0_seq1.mrna1;geneID=comp150155_c0_seq1.path1;Name=comp150155_c0_seq1;Dir=sensecoverage=99.9;identity=99.7;matches=1003;mismatches=3;indels=0;unknowns=0;Target=comp150155_c0_seq1 230 349 +;locus=RLOC_00014148
Chr2	stalkie_big_nohaplotig	exon	3397020	3397217	98	+	.	Parent=comp150155_c0_seq1.mrna1;Target=comp150155_c0_seq1 1 198 +
Chr2	stalkie_big_nohaplotig	exon	3407520	3408327	99	+	.	Parent=comp150155_c0_seq1.mrna1;Target=comp150155_c0_seq1 199 1006 +
Chr2	stalkie_big_nohaplotig	CDS	3407551	3407670	.	+	0	Parent=comp150155_c0_seq1.mrna1
Chr2	gffcl	locus	3427679	3432967	.	+	.	ID=RLOC_00014149;geneIDs=FBgn0028577.1.path1;transcripts=FBgn0028577.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3427679	3432967	.	+	.	ID=FBgn0028577.1.mrna1;geneID=FBgn0028577.1.path1;Name=FBgn0028577.1;Dir=sensecoverage=100.0;identity=99.6;matches=1796;mismatches=7;indels=0;unknowns=0;locus=RLOC_00014149
Chr2	stalkie_big_nohaplotig	exon	3427679	3427700	100	+	.	Parent=FBgn0028577.1.mrna1;Target=FBgn0028577.1 1 22 +
Chr2	stalkie_big_nohaplotig	exon	3430495	3430730	99	+	.	Parent=FBgn0028577.1.mrna1;Target=FBgn0028577.1 23 258 +
Chr2	stalkie_big_nohaplotig	exon	3430790	3430848	98	+	.	Parent=FBgn0028577.1.mrna1;Target=FBgn0028577.1 259 317 +
Chr2	stalkie_big_nohaplotig	exon	3431409	3431912	99	+	.	Parent=FBgn0028577.1.mrna1;Target=FBgn0028577.1 318 821 +
Chr2	stalkie_big_nohaplotig	exon	3431986	3432967	100	+	.	Parent=FBgn0028577.1.mrna1;Target=FBgn0028577.1 822 1803 +
Chr2	stalkie_big_nohaplotig	CDS	3427679	3427700	.	+	0	Parent=FBgn0028577.1.mrna1;Target=FBgn0028577.1 1 22 +
Chr2	stalkie_big_nohaplotig	CDS	3430495	3430730	.	+	2	Parent=FBgn0028577.1.mrna1;Target=FBgn0028577.1 23 258 +
Chr2	stalkie_big_nohaplotig	CDS	3430790	3430848	.	+	0	Parent=FBgn0028577.1.mrna1;Target=FBgn0028577.1 259 317 +
Chr2	stalkie_big_nohaplotig	CDS	3431409	3431912	.	+	1	Parent=FBgn0028577.1.mrna1;Target=FBgn0028577.1 318 821 +
Chr2	stalkie_big_nohaplotig	CDS	3431986	3432967	.	+	1	Parent=FBgn0028577.1.mrna1;Target=FBgn0028577.1 822 1803 +
Chr2	gffcl	locus	3434321	3435632	.	-	.	ID=RLOC_00014150;geneIDs=FBgn0032961.1.path1;transcripts=FBgn0032961.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3434321	3435632	.	-	.	ID=FBgn0032961.1.mrna1;geneID=FBgn0032961.1.path1;Name=FBgn0032961.1;Dir=sensecoverage=100.0;identity=99.7;matches=1131;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014150
Chr2	stalkie_big_nohaplotig	exon	3434321	3434461	100	-	.	Parent=FBgn0032961.1.mrna1;Target=FBgn0032961.1 994 1134 +
Chr2	stalkie_big_nohaplotig	exon	3434521	3434656	100	-	.	Parent=FBgn0032961.1.mrna1;Target=FBgn0032961.1 858 993 +
Chr2	stalkie_big_nohaplotig	exon	3434710	3435340	99	-	.	Parent=FBgn0032961.1.mrna1;Target=FBgn0032961.1 227 857 +
Chr2	stalkie_big_nohaplotig	exon	3435407	3435632	99	-	.	Parent=FBgn0032961.1.mrna1;Target=FBgn0032961.1 1 226 +
Chr2	stalkie_big_nohaplotig	CDS	3434321	3434461	.	-	0	Parent=FBgn0032961.1.mrna1;Target=FBgn0032961.1 994 1134 +
Chr2	stalkie_big_nohaplotig	CDS	3434521	3434656	.	-	1	Parent=FBgn0032961.1.mrna1;Target=FBgn0032961.1 858 993 +
Chr2	stalkie_big_nohaplotig	CDS	3434710	3435340	.	-	2	Parent=FBgn0032961.1.mrna1;Target=FBgn0032961.1 227 857 +
Chr2	stalkie_big_nohaplotig	CDS	3435407	3435632	.	-	0	Parent=FBgn0032961.1.mrna1;Target=FBgn0032961.1 1 226 +
Chr2	gffcl	locus	3437390	3438189	.	+	.	ID=RLOC_00014151;geneIDs=FBgn0010409.1.path1;transcripts=FBgn0010409.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3437390	3438189	.	+	.	ID=FBgn0010409.1.mrna1;geneID=FBgn0010409.1.path1;Name=FBgn0010409.1;Dir=sensecoverage=100.0;identity=100.0;matches=543;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014151
Chr2	stalkie_big_nohaplotig	exon	3437390	3437419	100	+	.	Parent=FBgn0010409.1.mrna1;Target=FBgn0010409.1 1 30 +
Chr2	stalkie_big_nohaplotig	exon	3437677	3438189	100	+	.	Parent=FBgn0010409.1.mrna1;Target=FBgn0010409.1 31 543 +
Chr2	stalkie_big_nohaplotig	CDS	3437390	3437419	.	+	0	Parent=FBgn0010409.1.mrna1;Target=FBgn0010409.1 1 30 +
Chr2	stalkie_big_nohaplotig	CDS	3437677	3438189	.	+	0	Parent=FBgn0010409.1.mrna1;Target=FBgn0010409.1 31 543 +
Chr2	gffcl	locus	3439559	3441503	.	+	.	ID=RLOC_00014152;geneIDs=FBgn0015247.1.path1;transcripts=FBgn0015247.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3439559	3441503	.	+	.	ID=FBgn0015247.1.mrna1;geneID=FBgn0015247.1.path1;Name=FBgn0015247.1;Dir=sensecoverage=100.0;identity=100.0;matches=1644;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014152
Chr2	stalkie_big_nohaplotig	exon	3439559	3439786	100	+	.	Parent=FBgn0015247.1.mrna1;Target=FBgn0015247.1 1 228 +
Chr2	stalkie_big_nohaplotig	exon	3439836	3440048	100	+	.	Parent=FBgn0015247.1.mrna1;Target=FBgn0015247.1 229 441 +
Chr2	stalkie_big_nohaplotig	exon	3440118	3440557	100	+	.	Parent=FBgn0015247.1.mrna1;Target=FBgn0015247.1 442 881 +
Chr2	stalkie_big_nohaplotig	exon	3440685	3441361	100	+	.	Parent=FBgn0015247.1.mrna1;Target=FBgn0015247.1 882 1558 +
Chr2	stalkie_big_nohaplotig	exon	3441418	3441503	100	+	.	Parent=FBgn0015247.1.mrna1;Target=FBgn0015247.1 1559 1644 +
Chr2	stalkie_big_nohaplotig	CDS	3439559	3439786	.	+	0	Parent=FBgn0015247.1.mrna1;Target=FBgn0015247.1 1 228 +
Chr2	stalkie_big_nohaplotig	CDS	3439836	3440048	.	+	0	Parent=FBgn0015247.1.mrna1;Target=FBgn0015247.1 229 441 +
Chr2	stalkie_big_nohaplotig	CDS	3440118	3440557	.	+	0	Parent=FBgn0015247.1.mrna1;Target=FBgn0015247.1 442 881 +
Chr2	stalkie_big_nohaplotig	CDS	3440685	3441361	.	+	1	Parent=FBgn0015247.1.mrna1;Target=FBgn0015247.1 882 1558 +
Chr2	stalkie_big_nohaplotig	CDS	3441418	3441503	.	+	2	Parent=FBgn0015247.1.mrna1;Target=FBgn0015247.1 1559 1644 +
Chr2	gffcl	locus	3457755	3460245	.	-	.	ID=RLOC_00014153;geneIDs=FBgn0050360.1.path3,comp146420_c0_seq1.path2,comp150213_c0_seq1.path3;transcripts=FBgn0050360.1.mrna3,comp150213_c0_seq1.mrna3,comp146420_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	3457755	3460245	.	-	.	ID=FBgn0050360.1.mrna3;geneID=FBgn0050360.1.path3;Name=FBgn0050360.1;Dir=sensecoverage=99.8;identity=99.3;matches=1805;mismatches=13;indels=0;unknowns=0;locus=RLOC_00014153
Chr2	stalkie_big_nohaplotig	exon	3457755	3457818	100	-	.	Parent=FBgn0050360.1.mrna3;Target=FBgn0050360.1 1758 1821 +
Chr2	stalkie_big_nohaplotig	exon	3457906	3458046	99	-	.	Parent=FBgn0050360.1.mrna3;Target=FBgn0050360.1 1617 1757 +
Chr2	stalkie_big_nohaplotig	exon	3458218	3458561	99	-	.	Parent=FBgn0050360.1.mrna3;Target=FBgn0050360.1 1273 1616 +
Chr2	stalkie_big_nohaplotig	exon	3458614	3458721	100	-	.	Parent=FBgn0050360.1.mrna3;Target=FBgn0050360.1 1165 1272 +
Chr2	stalkie_big_nohaplotig	exon	3458801	3459394	99	-	.	Parent=FBgn0050360.1.mrna3;Target=FBgn0050360.1 571 1164 +
Chr2	stalkie_big_nohaplotig	exon	3459679	3460245	98	-	.	Parent=FBgn0050360.1.mrna3;Target=FBgn0050360.1 4 570 +
Chr2	stalkie_big_nohaplotig	CDS	3457755	3457818	.	-	1	Parent=FBgn0050360.1.mrna3;Target=FBgn0050360.1 1758 1821 +
Chr2	stalkie_big_nohaplotig	CDS	3457906	3458046	.	-	1	Parent=FBgn0050360.1.mrna3;Target=FBgn0050360.1 1617 1757 +
Chr2	stalkie_big_nohaplotig	CDS	3458218	3458561	.	-	0	Parent=FBgn0050360.1.mrna3;Target=FBgn0050360.1 1273 1616 +
Chr2	stalkie_big_nohaplotig	CDS	3458614	3458721	.	-	0	Parent=FBgn0050360.1.mrna3;Target=FBgn0050360.1 1165 1272 +
Chr2	stalkie_big_nohaplotig	CDS	3458801	3459394	.	-	0	Parent=FBgn0050360.1.mrna3;Target=FBgn0050360.1 571 1164 +
Chr2	stalkie_big_nohaplotig	CDS	3459679	3460245	.	-	0	Parent=FBgn0050360.1.mrna3;Target=FBgn0050360.1 4 570 +
Chr2	stalkie_big_nohaplotig	mRNA	3458001	3458241	.	-	.	ID=comp150213_c0_seq1.mrna3;geneID=comp150213_c0_seq1.path3;Name=comp150213_c0_seq1;Dir=indeterminatecoverage=99.6;identity=96.3;matches=232;mismatches=9;indels=0;unknowns=0;Target=comp150213_c0_seq1 241 1 .;CDS_Target=comp150213_c0_seq1 239 126 .;locus=RLOC_00014153
Chr2	stalkie_big_nohaplotig	exon	3458001	3458241	96	-	.	Parent=comp150213_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	CDS	3458003	3458116	.	-	0	Parent=comp150213_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	3459372	3459702	.	-	.	ID=comp146420_c0_seq1.mrna2;geneID=comp146420_c0_seq1.path2;Name=comp146420_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.2;matches=318;mismatches=11;indels=5;unknowns=0;Target=comp146420_c0_seq1 332 1 .;CDS_Target=comp146420_c0_seq1 189 157 .;locus=RLOC_00014153
Chr2	stalkie_big_nohaplotig	exon	3459372	3459702	95	-	.	Parent=comp146420_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	3459515	3459547	.	-	0	Parent=comp146420_c0_seq1.mrna2
Chr2	gffcl	locus	3461873	3464154	.	-	.	ID=RLOC_00014154;geneIDs=FBgn0050359.1.path1;transcripts=FBgn0050359.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3461873	3464154	.	-	.	ID=FBgn0050359.1.mrna1;geneID=FBgn0050359.1.path1;Name=FBgn0050359.1;Dir=sensecoverage=100.0;identity=99.5;matches=1890;mismatches=9;indels=0;unknowns=0;locus=RLOC_00014154
Chr2	stalkie_big_nohaplotig	exon	3461873	3461993	97	-	.	Parent=FBgn0050359.1.mrna1;Target=FBgn0050359.1 1779 1899 +
Chr2	stalkie_big_nohaplotig	exon	3462064	3462207	100	-	.	Parent=FBgn0050359.1.mrna1;Target=FBgn0050359.1 1635 1778 +
Chr2	stalkie_big_nohaplotig	exon	3462269	3462720	99	-	.	Parent=FBgn0050359.1.mrna1;Target=FBgn0050359.1 1183 1634 +
Chr2	stalkie_big_nohaplotig	exon	3462797	3463249	99	-	.	Parent=FBgn0050359.1.mrna1;Target=FBgn0050359.1 730 1182 +
Chr2	stalkie_big_nohaplotig	exon	3463312	3463772	100	-	.	Parent=FBgn0050359.1.mrna1;Target=FBgn0050359.1 269 729 +
Chr2	stalkie_big_nohaplotig	exon	3463887	3464154	100	-	.	Parent=FBgn0050359.1.mrna1;Target=FBgn0050359.1 1 268 +
Chr2	stalkie_big_nohaplotig	CDS	3461873	3461993	.	-	1	Parent=FBgn0050359.1.mrna1;Target=FBgn0050359.1 1779 1899 +
Chr2	stalkie_big_nohaplotig	CDS	3462064	3462207	.	-	1	Parent=FBgn0050359.1.mrna1;Target=FBgn0050359.1 1635 1778 +
Chr2	stalkie_big_nohaplotig	CDS	3462269	3462720	.	-	0	Parent=FBgn0050359.1.mrna1;Target=FBgn0050359.1 1183 1634 +
Chr2	stalkie_big_nohaplotig	CDS	3462797	3463249	.	-	0	Parent=FBgn0050359.1.mrna1;Target=FBgn0050359.1 730 1182 +
Chr2	stalkie_big_nohaplotig	CDS	3463312	3463772	.	-	2	Parent=FBgn0050359.1.mrna1;Target=FBgn0050359.1 269 729 +
Chr2	stalkie_big_nohaplotig	CDS	3463887	3464154	.	-	0	Parent=FBgn0050359.1.mrna1;Target=FBgn0050359.1 1 268 +
Chr2	gffcl	locus	3464846	3466604	.	-	.	ID=RLOC_00014155;geneIDs=FBgn0033294.2.path1;transcripts=FBgn0033294.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3464846	3466604	.	-	.	ID=FBgn0033294.2.mrna1;geneID=FBgn0033294.2.path1;Name=FBgn0033294.2;Dir=sensecoverage=100.0;identity=99.4;matches=1435;mismatches=7;indels=1;unknowns=0;Target=FBgn0033294.2 3 68 +;locus=RLOC_00014155
Chr2	stalkie_big_nohaplotig	exon	3464846	3464936	100	-	.	Parent=FBgn0033294.2.mrna1;Target=FBgn0033294.2 1353 1443 +
Chr2	stalkie_big_nohaplotig	exon	3465000	3465143	99	-	.	Parent=FBgn0033294.2.mrna1;Target=FBgn0033294.2 1209 1352 +
Chr2	stalkie_big_nohaplotig	exon	3465206	3465657	100	-	.	Parent=FBgn0033294.2.mrna1;Target=FBgn0033294.2 757 1208 +
Chr2	stalkie_big_nohaplotig	exon	3465716	3465914	100	-	.	Parent=FBgn0033294.2.mrna1;Target=FBgn0033294.2 558 756 +
Chr2	stalkie_big_nohaplotig	exon	3465991	3466244	98	-	.	Parent=FBgn0033294.2.mrna1;Target=FBgn0033294.2 304 557 +
Chr2	stalkie_big_nohaplotig	exon	3466303	3466604	98	-	.	Parent=FBgn0033294.2.mrna1;Target=FBgn0033294.2 1 303 +
Chr2	stalkie_big_nohaplotig	CDS	3466538	3466602	.	-	0	Parent=FBgn0033294.2.mrna1
Chr2	gffcl	locus	3473600	3475763	.	-	.	ID=RLOC_00014156;geneIDs=FBgn0033294.1.path1;transcripts=FBgn0033294.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3473600	3475763	.	-	.	ID=FBgn0033294.1.mrna1;geneID=FBgn0033294.1.path1;Name=FBgn0033294.1;Dir=sensecoverage=100.0;identity=99.5;matches=1779;mismatches=9;indels=0;unknowns=0;locus=RLOC_00014156
Chr2	stalkie_big_nohaplotig	exon	3473600	3473672	100	-	.	Parent=FBgn0033294.1.mrna1;Target=FBgn0033294.1 1716 1788 +
Chr2	stalkie_big_nohaplotig	exon	3473740	3473883	99	-	.	Parent=FBgn0033294.1.mrna1;Target=FBgn0033294.1 1572 1715 +
Chr2	stalkie_big_nohaplotig	exon	3473942	3474393	99	-	.	Parent=FBgn0033294.1.mrna1;Target=FBgn0033294.1 1120 1571 +
Chr2	stalkie_big_nohaplotig	exon	3474455	3474653	100	-	.	Parent=FBgn0033294.1.mrna1;Target=FBgn0033294.1 921 1119 +
Chr2	stalkie_big_nohaplotig	exon	3474727	3474980	100	-	.	Parent=FBgn0033294.1.mrna1;Target=FBgn0033294.1 667 920 +
Chr2	stalkie_big_nohaplotig	exon	3475098	3475763	99	-	.	Parent=FBgn0033294.1.mrna1;Target=FBgn0033294.1 1 666 +
Chr2	stalkie_big_nohaplotig	CDS	3473600	3473672	.	-	1	Parent=FBgn0033294.1.mrna1;Target=FBgn0033294.1 1716 1788 +
Chr2	stalkie_big_nohaplotig	CDS	3473740	3473883	.	-	1	Parent=FBgn0033294.1.mrna1;Target=FBgn0033294.1 1572 1715 +
Chr2	stalkie_big_nohaplotig	CDS	3473942	3474393	.	-	0	Parent=FBgn0033294.1.mrna1;Target=FBgn0033294.1 1120 1571 +
Chr2	stalkie_big_nohaplotig	CDS	3474455	3474653	.	-	1	Parent=FBgn0033294.1.mrna1;Target=FBgn0033294.1 921 1119 +
Chr2	stalkie_big_nohaplotig	CDS	3474727	3474980	.	-	0	Parent=FBgn0033294.1.mrna1;Target=FBgn0033294.1 667 920 +
Chr2	stalkie_big_nohaplotig	CDS	3475098	3475763	.	-	0	Parent=FBgn0033294.1.mrna1;Target=FBgn0033294.1 1 666 +
Chr2	gffcl	locus	3476129	3477927	.	-	.	ID=RLOC_00014157;geneIDs=FBgn0031462.1.path1;transcripts=FBgn0031462.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3476129	3477927	.	-	.	ID=FBgn0031462.1.mrna1;geneID=FBgn0031462.1.path1;Name=FBgn0031462.1;Dir=sensecoverage=99.9;identity=99.8;matches=1622;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014157
Chr2	stalkie_big_nohaplotig	exon	3476129	3476270	99	-	.	Parent=FBgn0031462.1.mrna1;Target=FBgn0031462.1 1484 1625 +
Chr2	stalkie_big_nohaplotig	exon	3476331	3476420	100	-	.	Parent=FBgn0031462.1.mrna1;Target=FBgn0031462.1 1394 1483 +
Chr2	stalkie_big_nohaplotig	exon	3476479	3476872	100	-	.	Parent=FBgn0031462.1.mrna1;Target=FBgn0031462.1 1000 1393 +
Chr2	stalkie_big_nohaplotig	exon	3476929	3477927	99	-	.	Parent=FBgn0031462.1.mrna1;Target=FBgn0031462.1 1 999 +
Chr2	stalkie_big_nohaplotig	CDS	3476131	3476270	.	-	2	Parent=FBgn0031462.1.mrna1;Target=FBgn0031462.1 1484 1623 +
Chr2	stalkie_big_nohaplotig	CDS	3476331	3476420	.	-	2	Parent=FBgn0031462.1.mrna1;Target=FBgn0031462.1 1394 1483 +
Chr2	stalkie_big_nohaplotig	CDS	3476479	3476872	.	-	0	Parent=FBgn0031462.1.mrna1;Target=FBgn0031462.1 1000 1393 +
Chr2	stalkie_big_nohaplotig	CDS	3476929	3477927	.	-	0	Parent=FBgn0031462.1.mrna1;Target=FBgn0031462.1 1 999 +
Chr2	gffcl	locus	3478932	3480368	.	+	.	ID=RLOC_00014158;geneIDs=FBgn0002571.1.path1;transcripts=FBgn0002571.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3478932	3480368	.	+	.	ID=FBgn0002571.1.mrna1;geneID=FBgn0002571.1.path1;Name=FBgn0002571.1;Dir=sensecoverage=64.3;identity=99.6;matches=1234;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014158
Chr2	stalkie_big_nohaplotig	exon	3478932	3479139	99	+	.	Parent=FBgn0002571.1.mrna1;Target=FBgn0002571.1 1 208 +
Chr2	stalkie_big_nohaplotig	exon	3479199	3479659	99	+	.	Parent=FBgn0002571.1.mrna1;Target=FBgn0002571.1 209 669 +
Chr2	stalkie_big_nohaplotig	exon	3479728	3480180	99	+	.	Parent=FBgn0002571.1.mrna1;Target=FBgn0002571.1 670 1122 +
Chr2	stalkie_big_nohaplotig	exon	3480252	3480368	99	+	.	Parent=FBgn0002571.1.mrna1;Target=FBgn0002571.1 1123 1239 +
Chr2	stalkie_big_nohaplotig	CDS	3478932	3479139	.	+	0	Parent=FBgn0002571.1.mrna1;Target=FBgn0002571.1 1 208 +
Chr2	stalkie_big_nohaplotig	CDS	3479199	3479659	.	+	2	Parent=FBgn0002571.1.mrna1;Target=FBgn0002571.1 209 669 +
Chr2	stalkie_big_nohaplotig	CDS	3479728	3480180	.	+	0	Parent=FBgn0002571.1.mrna1;Target=FBgn0002571.1 670 1122 +
Chr2	stalkie_big_nohaplotig	CDS	3480252	3480368	.	+	0	Parent=FBgn0002571.1.mrna1;Target=FBgn0002571.1 1123 1239 +
Chr2	gffcl	locus	3481969	3485075	.	-	.	ID=RLOC_00014159;geneIDs=FBgn0002569.1.path1;transcripts=FBgn0002569.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3481969	3485075	.	-	.	ID=FBgn0002569.1.mrna1;geneID=FBgn0002569.1.path1;Name=FBgn0002569.1;Dir=sensecoverage=100.0;identity=99.5;matches=1735;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014159
Chr2	stalkie_big_nohaplotig	exon	3481969	3482038	100	-	.	Parent=FBgn0002569.1.mrna1;Target=FBgn0002569.1 1674 1743 +
Chr2	stalkie_big_nohaplotig	exon	3482657	3482785	100	-	.	Parent=FBgn0002569.1.mrna1;Target=FBgn0002569.1 1545 1673 +
Chr2	stalkie_big_nohaplotig	exon	3483115	3483431	99	-	.	Parent=FBgn0002569.1.mrna1;Target=FBgn0002569.1 1228 1544 +
Chr2	stalkie_big_nohaplotig	exon	3483552	3483858	99	-	.	Parent=FBgn0002569.1.mrna1;Target=FBgn0002569.1 921 1227 +
Chr2	stalkie_big_nohaplotig	exon	3484094	3484470	99	-	.	Parent=FBgn0002569.1.mrna1;Target=FBgn0002569.1 544 920 +
Chr2	stalkie_big_nohaplotig	exon	3484533	3485075	99	-	.	Parent=FBgn0002569.1.mrna1;Target=FBgn0002569.1 1 543 +
Chr2	stalkie_big_nohaplotig	CDS	3481969	3482038	.	-	1	Parent=FBgn0002569.1.mrna1;Target=FBgn0002569.1 1674 1743 +
Chr2	stalkie_big_nohaplotig	CDS	3482657	3482785	.	-	1	Parent=FBgn0002569.1.mrna1;Target=FBgn0002569.1 1545 1673 +
Chr2	stalkie_big_nohaplotig	CDS	3483115	3483431	.	-	0	Parent=FBgn0002569.1.mrna1;Target=FBgn0002569.1 1228 1544 +
Chr2	stalkie_big_nohaplotig	CDS	3483552	3483858	.	-	1	Parent=FBgn0002569.1.mrna1;Target=FBgn0002569.1 921 1227 +
Chr2	stalkie_big_nohaplotig	CDS	3484094	3484470	.	-	0	Parent=FBgn0002569.1.mrna1;Target=FBgn0002569.1 544 920 +
Chr2	stalkie_big_nohaplotig	CDS	3484533	3485075	.	-	0	Parent=FBgn0002569.1.mrna1;Target=FBgn0002569.1 1 543 +
Chr2	gffcl	locus	3487203	3490338	.	+	.	ID=RLOC_00014160;geneIDs=FBgn0002570.1.path1,comp159825_c0_seq1.path1;transcripts=FBgn0002570.1.mrna1,comp159825_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3487203	3490338	.	+	.	ID=FBgn0002570.1.mrna1;geneID=FBgn0002570.1.path1;Name=FBgn0002570.1;Dir=sensecoverage=100.0;identity=99.5;matches=1750;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014160
Chr2	stalkie_big_nohaplotig	exon	3487203	3487371	100	+	.	Parent=FBgn0002570.1.mrna1;Target=FBgn0002570.1 1 169 +
Chr2	stalkie_big_nohaplotig	exon	3487427	3488463	99	+	.	Parent=FBgn0002570.1.mrna1;Target=FBgn0002570.1 170 1206 +
Chr2	stalkie_big_nohaplotig	exon	3488633	3488780	99	+	.	Parent=FBgn0002570.1.mrna1;Target=FBgn0002570.1 1207 1354 +
Chr2	stalkie_big_nohaplotig	exon	3489862	3490198	100	+	.	Parent=FBgn0002570.1.mrna1;Target=FBgn0002570.1 1355 1691 +
Chr2	stalkie_big_nohaplotig	exon	3490272	3490338	98	+	.	Parent=FBgn0002570.1.mrna1;Target=FBgn0002570.1 1692 1758 +
Chr2	stalkie_big_nohaplotig	CDS	3487203	3487371	.	+	0	Parent=FBgn0002570.1.mrna1;Target=FBgn0002570.1 1 169 +
Chr2	stalkie_big_nohaplotig	CDS	3487427	3488463	.	+	2	Parent=FBgn0002570.1.mrna1;Target=FBgn0002570.1 170 1206 +
Chr2	stalkie_big_nohaplotig	CDS	3488633	3488780	.	+	0	Parent=FBgn0002570.1.mrna1;Target=FBgn0002570.1 1207 1354 +
Chr2	stalkie_big_nohaplotig	CDS	3489862	3490198	.	+	2	Parent=FBgn0002570.1.mrna1;Target=FBgn0002570.1 1355 1691 +
Chr2	stalkie_big_nohaplotig	CDS	3490272	3490338	.	+	1	Parent=FBgn0002570.1.mrna1;Target=FBgn0002570.1 1692 1758 +
Chr2	stalkie_big_nohaplotig	mRNA	3488760	3489882	.	+	.	ID=comp159825_c0_seq1.mrna1;geneID=comp159825_c0_seq1.path1;Name=comp159825_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=1114;mismatches=9;indels=12;unknowns=0;Target=comp159825_c0_seq1 1135 1 .;CDS_Target=comp159825_c0_seq1 338 204 .;locus=RLOC_00014160
Chr2	stalkie_big_nohaplotig	exon	3488760	3489882	98	+	.	Parent=comp159825_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	3488963	3489097	.	+	0	Parent=comp159825_c0_seq1.mrna1
Chr2	gffcl	locus	3490438	3498800	.	-	.	ID=RLOC_00014161;geneIDs=FBgn0015035.1.path1,comp161831_c0_seq1.path1;transcripts=FBgn0015035.1.mrna1,comp161831_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3490438	3495195	.	-	.	ID=FBgn0015035.1.mrna1;geneID=FBgn0015035.1.path1;Name=FBgn0015035.1;Dir=sensecoverage=100.0;identity=99.8;matches=1598;mismatches=4;indels=0;unknowns=0;locus=RLOC_00014161
Chr2	stalkie_big_nohaplotig	exon	3490438	3490676	100	-	.	Parent=FBgn0015035.1.mrna1;Target=FBgn0015035.1 1364 1602 +
Chr2	stalkie_big_nohaplotig	exon	3490734	3490916	100	-	.	Parent=FBgn0015035.1.mrna1;Target=FBgn0015035.1 1181 1363 +
Chr2	stalkie_big_nohaplotig	exon	3490987	3491158	100	-	.	Parent=FBgn0015035.1.mrna1;Target=FBgn0015035.1 1009 1180 +
Chr2	stalkie_big_nohaplotig	exon	3491227	3491295	100	-	.	Parent=FBgn0015035.1.mrna1;Target=FBgn0015035.1 940 1008 +
Chr2	stalkie_big_nohaplotig	exon	3491361	3491549	98	-	.	Parent=FBgn0015035.1.mrna1;Target=FBgn0015035.1 751 939 +
Chr2	stalkie_big_nohaplotig	exon	3491615	3491741	100	-	.	Parent=FBgn0015035.1.mrna1;Target=FBgn0015035.1 624 750 +
Chr2	stalkie_big_nohaplotig	exon	3491801	3491870	100	-	.	Parent=FBgn0015035.1.mrna1;Target=FBgn0015035.1 554 623 +
Chr2	stalkie_big_nohaplotig	exon	3491935	3492214	99	-	.	Parent=FBgn0015035.1.mrna1;Target=FBgn0015035.1 274 553 +
Chr2	stalkie_big_nohaplotig	exon	3492340	3492449	100	-	.	Parent=FBgn0015035.1.mrna1;Target=FBgn0015035.1 164 273 +
Chr2	stalkie_big_nohaplotig	exon	3495033	3495195	100	-	.	Parent=FBgn0015035.1.mrna1;Target=FBgn0015035.1 1 163 +
Chr2	stalkie_big_nohaplotig	CDS	3490438	3490676	.	-	2	Parent=FBgn0015035.1.mrna1;Target=FBgn0015035.1 1364 1602 +
Chr2	stalkie_big_nohaplotig	CDS	3490734	3490916	.	-	2	Parent=FBgn0015035.1.mrna1;Target=FBgn0015035.1 1181 1363 +
Chr2	stalkie_big_nohaplotig	CDS	3490987	3491158	.	-	0	Parent=FBgn0015035.1.mrna1;Target=FBgn0015035.1 1009 1180 +
Chr2	stalkie_big_nohaplotig	CDS	3491227	3491295	.	-	0	Parent=FBgn0015035.1.mrna1;Target=FBgn0015035.1 940 1008 +
Chr2	stalkie_big_nohaplotig	CDS	3491361	3491549	.	-	0	Parent=FBgn0015035.1.mrna1;Target=FBgn0015035.1 751 939 +
Chr2	stalkie_big_nohaplotig	CDS	3491615	3491741	.	-	1	Parent=FBgn0015035.1.mrna1;Target=FBgn0015035.1 624 750 +
Chr2	stalkie_big_nohaplotig	CDS	3491801	3491870	.	-	2	Parent=FBgn0015035.1.mrna1;Target=FBgn0015035.1 554 623 +
Chr2	stalkie_big_nohaplotig	CDS	3491935	3492214	.	-	0	Parent=FBgn0015035.1.mrna1;Target=FBgn0015035.1 274 553 +
Chr2	stalkie_big_nohaplotig	CDS	3492340	3492449	.	-	2	Parent=FBgn0015035.1.mrna1;Target=FBgn0015035.1 164 273 +
Chr2	stalkie_big_nohaplotig	CDS	3495033	3495195	.	-	0	Parent=FBgn0015035.1.mrna1;Target=FBgn0015035.1 1 163 +
Chr2	stalkie_big_nohaplotig	mRNA	3492387	3498800	.	-	.	ID=comp161831_c0_seq1.mrna1;geneID=comp161831_c0_seq1.path1;Name=comp161831_c0_seq1;Dir=antisensecoverage=99.9;identity=95.4;matches=1193;mismatches=13;indels=44;unknowns=0;Target=comp161831_c0_seq1 873 1022 .;locus=RLOC_00014161
Chr2	stalkie_big_nohaplotig	exon	3492387	3492447	96	-	.	Parent=comp161831_c0_seq1.mrna1;Target=comp161831_c0_seq1 1 61 -
Chr2	stalkie_big_nohaplotig	exon	3495882	3495883	100	-	.	Parent=comp161831_c0_seq1.mrna1;Target=comp161831_c0_seq1 62 63 -
Chr2	stalkie_big_nohaplotig	exon	3497520	3497924	89	-	.	Parent=comp161831_c0_seq1.mrna1;Target=comp161831_c0_seq1 64 507 -
Chr2	stalkie_big_nohaplotig	exon	3497999	3498173	99	-	.	Parent=comp161831_c0_seq1.mrna1;Target=comp161831_c0_seq1 508 682 -
Chr2	stalkie_big_nohaplotig	exon	3498238	3498800	98	-	.	Parent=comp161831_c0_seq1.mrna1;Target=comp161831_c0_seq1 683 1250 -
Chr2	stalkie_big_nohaplotig	CDS	3498423	3498572	.	-	0	Parent=comp161831_c0_seq1.mrna1
Chr2	gffcl	locus	3524442	3524901	.	+	.	ID=RLOC_00014162;geneIDs=comp156181_c0_seq1.path1;transcripts=comp156181_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3524442	3524901	.	+	.	ID=comp156181_c0_seq1.mrna1;geneID=comp156181_c0_seq1.path1;Name=comp156181_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=460;mismatches=0;indels=0;unknowns=0;Target=comp156181_c0_seq1 460 1 .;CDS_Target=comp156181_c0_seq1 110 3 .;locus=RLOC_00014162
Chr2	stalkie_big_nohaplotig	exon	3524442	3524901	100	+	.	Parent=comp156181_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	3524444	3524551	.	+	0	Parent=comp156181_c0_seq1.mrna1
Chr2	gffcl	locus	3526559	3528178	.	+	.	ID=RLOC_00014163;geneIDs=comp150821_c0_seq1.path1;transcripts=comp150821_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3526559	3528178	.	+	.	ID=comp150821_c0_seq1.mrna1;geneID=comp150821_c0_seq1.path1;Name=comp150821_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.5;matches=1584;mismatches=26;indels=48;unknowns=0;Target=comp150821_c0_seq1 1648 1 .;CDS_Target=comp150821_c0_seq1 418 380 .;locus=RLOC_00014163
Chr2	stalkie_big_nohaplotig	exon	3526559	3528178	95	+	.	Parent=comp150821_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	3526906	3526946	.	+	0	Parent=comp150821_c0_seq1.mrna1
Chr2	gffcl	locus	3529741	3542270	.	+	.	ID=RLOC_00014164;geneIDs=FBgn0034808.1.path1;transcripts=FBgn0034808.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3529741	3542270	.	+	.	ID=FBgn0034808.1.mrna1;geneID=FBgn0034808.1.path1;Name=FBgn0034808.1;Dir=sensecoverage=100.0;identity=99.9;matches=830;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014164
Chr2	stalkie_big_nohaplotig	exon	3529741	3529834	100	+	.	Parent=FBgn0034808.1.mrna1;Target=FBgn0034808.1 1 94 +
Chr2	stalkie_big_nohaplotig	exon	3538145	3538292	100	+	.	Parent=FBgn0034808.1.mrna1;Target=FBgn0034808.1 95 242 +
Chr2	stalkie_big_nohaplotig	exon	3541469	3541611	100	+	.	Parent=FBgn0034808.1.mrna1;Target=FBgn0034808.1 243 385 +
Chr2	stalkie_big_nohaplotig	exon	3541710	3541866	99	+	.	Parent=FBgn0034808.1.mrna1;Target=FBgn0034808.1 386 542 +
Chr2	stalkie_big_nohaplotig	exon	3541924	3542038	100	+	.	Parent=FBgn0034808.1.mrna1;Target=FBgn0034808.1 543 657 +
Chr2	stalkie_big_nohaplotig	exon	3542097	3542270	100	+	.	Parent=FBgn0034808.1.mrna1;Target=FBgn0034808.1 658 831 +
Chr2	stalkie_big_nohaplotig	CDS	3529741	3529834	.	+	0	Parent=FBgn0034808.1.mrna1;Target=FBgn0034808.1 1 94 +
Chr2	stalkie_big_nohaplotig	CDS	3538145	3538292	.	+	2	Parent=FBgn0034808.1.mrna1;Target=FBgn0034808.1 95 242 +
Chr2	stalkie_big_nohaplotig	CDS	3541469	3541611	.	+	1	Parent=FBgn0034808.1.mrna1;Target=FBgn0034808.1 243 385 +
Chr2	stalkie_big_nohaplotig	CDS	3541710	3541866	.	+	2	Parent=FBgn0034808.1.mrna1;Target=FBgn0034808.1 386 542 +
Chr2	stalkie_big_nohaplotig	CDS	3541924	3542038	.	+	1	Parent=FBgn0034808.1.mrna1;Target=FBgn0034808.1 543 657 +
Chr2	stalkie_big_nohaplotig	CDS	3542097	3542270	.	+	0	Parent=FBgn0034808.1.mrna1;Target=FBgn0034808.1 658 831 +
Chr2	gffcl	locus	3548889	3550686	.	-	.	ID=RLOC_00014165;geneIDs=comp150067_c0_seq1.path1;transcripts=comp150067_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3548889	3550686	.	-	.	ID=comp150067_c0_seq1.mrna1;geneID=comp150067_c0_seq1.path1;Name=comp150067_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=602;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014165
Chr2	stalkie_big_nohaplotig	exon	3548889	3549057	98	-	.	Parent=comp150067_c0_seq1.mrna1;Target=comp150067_c0_seq1 437 605 +
Chr2	stalkie_big_nohaplotig	exon	3550251	3550686	99	-	.	Parent=comp150067_c0_seq1.mrna1;Target=comp150067_c0_seq1 1 436 +
Chr2	stalkie_big_nohaplotig	CDS	3548960	3549057	.	-	2	Parent=comp150067_c0_seq1.mrna1;Target=comp150067_c0_seq1 437 534 +
Chr2	stalkie_big_nohaplotig	CDS	3550251	3550284	.	-	0	Parent=comp150067_c0_seq1.mrna1;Target=comp150067_c0_seq1 403 436 +
Chr2	gffcl	locus	3567201	3567526	.	-	.	ID=RLOC_00014166;geneIDs=comp119290_c1_seq1.path2;transcripts=comp119290_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	3567201	3567526	.	-	.	ID=comp119290_c1_seq1.mrna2;geneID=comp119290_c1_seq1.path2;Name=comp119290_c1_seq1;Dir=sensecoverage=96.4;identity=99.6;matches=264;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014166
Chr2	stalkie_big_nohaplotig	exon	3567201	3567317	99	-	.	Parent=comp119290_c1_seq1.mrna2;Target=comp119290_c1_seq1 159 275 +
Chr2	stalkie_big_nohaplotig	exon	3567379	3567526	100	-	.	Parent=comp119290_c1_seq1.mrna2;Target=comp119290_c1_seq1 11 158 +
Chr2	stalkie_big_nohaplotig	CDS	3567202	3567317	.	-	2	Parent=comp119290_c1_seq1.mrna2;Target=comp119290_c1_seq1 159 274 +
Chr2	stalkie_big_nohaplotig	CDS	3567379	3567526	.	-	0	Parent=comp119290_c1_seq1.mrna2;Target=comp119290_c1_seq1 11 158 +
Chr2	gffcl	locus	3581788	3583013	.	+	.	ID=RLOC_00014167;geneIDs=FBgn0034804.1.path1;transcripts=FBgn0034804.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3581788	3583013	.	+	.	ID=FBgn0034804.1.mrna1;geneID=FBgn0034804.1.path1;Name=FBgn0034804.1;Dir=sensecoverage=99.7;identity=99.2;matches=1042;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014167
Chr2	stalkie_big_nohaplotig	exon	3581788	3581837	94	+	.	Parent=FBgn0034804.1.mrna1;Target=FBgn0034804.1 4 53 +
Chr2	stalkie_big_nohaplotig	exon	3581897	3582272	99	+	.	Parent=FBgn0034804.1.mrna1;Target=FBgn0034804.1 54 429 +
Chr2	stalkie_big_nohaplotig	exon	3582327	3582479	99	+	.	Parent=FBgn0034804.1.mrna1;Target=FBgn0034804.1 430 582 +
Chr2	stalkie_big_nohaplotig	exon	3582543	3583013	99	+	.	Parent=FBgn0034804.1.mrna1;Target=FBgn0034804.1 583 1053 +
Chr2	stalkie_big_nohaplotig	CDS	3581788	3581837	.	+	0	Parent=FBgn0034804.1.mrna1;Target=FBgn0034804.1 4 53 +
Chr2	stalkie_big_nohaplotig	CDS	3581897	3582272	.	+	1	Parent=FBgn0034804.1.mrna1;Target=FBgn0034804.1 54 429 +
Chr2	stalkie_big_nohaplotig	CDS	3582327	3582479	.	+	0	Parent=FBgn0034804.1.mrna1;Target=FBgn0034804.1 430 582 +
Chr2	stalkie_big_nohaplotig	CDS	3582543	3583013	.	+	0	Parent=FBgn0034804.1.mrna1;Target=FBgn0034804.1 583 1053 +
Chr2	gffcl	locus	3583285	3583984	.	-	.	ID=RLOC_00014168;geneIDs=FBgn0034803.1.path1;transcripts=FBgn0034803.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3583285	3583984	.	-	.	ID=FBgn0034803.1.mrna1;geneID=FBgn0034803.1.path1;Name=FBgn0034803.1;Dir=sensecoverage=100.0;identity=100.0;matches=642;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014168
Chr2	stalkie_big_nohaplotig	exon	3583285	3583576	100	-	.	Parent=FBgn0034803.1.mrna1;Target=FBgn0034803.1 351 642 +
Chr2	stalkie_big_nohaplotig	exon	3583635	3583984	100	-	.	Parent=FBgn0034803.1.mrna1;Target=FBgn0034803.1 1 350 +
Chr2	stalkie_big_nohaplotig	CDS	3583285	3583576	.	-	1	Parent=FBgn0034803.1.mrna1;Target=FBgn0034803.1 351 642 +
Chr2	stalkie_big_nohaplotig	CDS	3583635	3583984	.	-	0	Parent=FBgn0034803.1.mrna1;Target=FBgn0034803.1 1 350 +
Chr2	gffcl	locus	3586552	3587013	.	+	.	ID=RLOC_00014170;geneIDs=FBgn0034802.1.path1;transcripts=FBgn0034802.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3586552	3587013	.	+	.	ID=FBgn0034802.1.mrna1;geneID=FBgn0034802.1.path1;Name=FBgn0034802.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=461;mismatches=1;indels=0;unknowns=0;Target=FBgn0034802.1 462 1 .;locus=RLOC_00014170
Chr2	stalkie_big_nohaplotig	exon	3586552	3587013	99	+	.	Parent=FBgn0034802.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	3586552	3587013	.	+	0	Parent=FBgn0034802.1.mrna1
Chr2	gffcl	locus	3588214	3592880	.	-	.	ID=RLOC_00014171;geneIDs=FBgn0261564.1.path1;transcripts=FBgn0261564.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3588214	3592880	.	-	.	ID=FBgn0261564.1.mrna1;geneID=FBgn0261564.1.path1;Name=FBgn0261564.1;Dir=sensecoverage=100.0;identity=99.1;matches=1252;mismatches=5;indels=6;unknowns=0;locus=RLOC_00014171
Chr2	stalkie_big_nohaplotig	exon	3588214	3588672	97	-	.	Parent=FBgn0261564.1.mrna1;Target=FBgn0261564.1 799 1263 +
Chr2	stalkie_big_nohaplotig	exon	3589973	3590102	100	-	.	Parent=FBgn0261564.1.mrna1;Target=FBgn0261564.1 669 798 +
Chr2	stalkie_big_nohaplotig	exon	3590165	3590313	100	-	.	Parent=FBgn0261564.1.mrna1;Target=FBgn0261564.1 520 668 +
Chr2	stalkie_big_nohaplotig	exon	3590364	3590450	100	-	.	Parent=FBgn0261564.1.mrna1;Target=FBgn0261564.1 433 519 +
Chr2	stalkie_big_nohaplotig	exon	3591676	3591789	99	-	.	Parent=FBgn0261564.1.mrna1;Target=FBgn0261564.1 319 432 +
Chr2	stalkie_big_nohaplotig	exon	3591860	3592057	100	-	.	Parent=FBgn0261564.1.mrna1;Target=FBgn0261564.1 121 318 +
Chr2	stalkie_big_nohaplotig	exon	3592130	3592202	100	-	.	Parent=FBgn0261564.1.mrna1;Target=FBgn0261564.1 48 120 +
Chr2	stalkie_big_nohaplotig	exon	3592834	3592880	100	-	.	Parent=FBgn0261564.1.mrna1;Target=FBgn0261564.1 1 47 +
Chr2	stalkie_big_nohaplotig	CDS	3588214	3588672	.	-	0	Parent=FBgn0261564.1.mrna1;Target=FBgn0261564.1 799 1263 +
Chr2	stalkie_big_nohaplotig	CDS	3589973	3590102	.	-	1	Parent=FBgn0261564.1.mrna1;Target=FBgn0261564.1 669 798 +
Chr2	stalkie_big_nohaplotig	CDS	3590165	3590313	.	-	0	Parent=FBgn0261564.1.mrna1;Target=FBgn0261564.1 520 668 +
Chr2	stalkie_big_nohaplotig	CDS	3590364	3590450	.	-	0	Parent=FBgn0261564.1.mrna1;Target=FBgn0261564.1 433 519 +
Chr2	stalkie_big_nohaplotig	CDS	3591676	3591789	.	-	0	Parent=FBgn0261564.1.mrna1;Target=FBgn0261564.1 319 432 +
Chr2	stalkie_big_nohaplotig	CDS	3591860	3592057	.	-	0	Parent=FBgn0261564.1.mrna1;Target=FBgn0261564.1 121 318 +
Chr2	stalkie_big_nohaplotig	CDS	3592130	3592202	.	-	1	Parent=FBgn0261564.1.mrna1;Target=FBgn0261564.1 48 120 +
Chr2	stalkie_big_nohaplotig	CDS	3592834	3592880	.	-	0	Parent=FBgn0261564.1.mrna1;Target=FBgn0261564.1 1 47 +
Chr2	gffcl	locus	3588984	3589943	.	+	.	ID=RLOC_00014172;geneIDs=comp159952_c0_seq1.path1;transcripts=comp159952_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3588984	3589943	.	+	.	ID=comp159952_c0_seq1.mrna1;geneID=comp159952_c0_seq1.path1;Name=comp159952_c0_seq1;Dir=indeterminatecoverage=97.2;identity=98.0;matches=942;mismatches=18;indels=1;unknowns=0;Target=comp159952_c0_seq1 989 29 .;CDS_Target=comp159952_c0_seq1 800 720 .;locus=RLOC_00014172
Chr2	stalkie_big_nohaplotig	exon	3588984	3589943	98	+	.	Parent=comp159952_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	3589674	3589754	.	+	0	Parent=comp159952_c0_seq1.mrna1
Chr2	gffcl	locus	3599032	3601522	.	+	.	ID=RLOC_00014173;geneIDs=FBgn0050360.1.path1,comp146420_c0_seq1.path3,comp150213_c0_seq1.path1;transcripts=FBgn0050360.1.mrna1,comp146420_c0_seq1.mrna3,comp150213_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3599032	3601522	.	+	.	ID=FBgn0050360.1.mrna1;geneID=FBgn0050360.1.path1;Name=FBgn0050360.1;Dir=sensecoverage=99.8;identity=99.4;matches=1807;mismatches=11;indels=0;unknowns=0;locus=RLOC_00014173
Chr2	stalkie_big_nohaplotig	exon	3599032	3599598	98	+	.	Parent=FBgn0050360.1.mrna1;Target=FBgn0050360.1 4 570 +
Chr2	stalkie_big_nohaplotig	exon	3599883	3600476	99	+	.	Parent=FBgn0050360.1.mrna1;Target=FBgn0050360.1 571 1164 +
Chr2	stalkie_big_nohaplotig	exon	3600556	3600663	99	+	.	Parent=FBgn0050360.1.mrna1;Target=FBgn0050360.1 1165 1272 +
Chr2	stalkie_big_nohaplotig	exon	3600716	3601059	99	+	.	Parent=FBgn0050360.1.mrna1;Target=FBgn0050360.1 1273 1616 +
Chr2	stalkie_big_nohaplotig	exon	3601231	3601371	100	+	.	Parent=FBgn0050360.1.mrna1;Target=FBgn0050360.1 1617 1757 +
Chr2	stalkie_big_nohaplotig	exon	3601459	3601522	100	+	.	Parent=FBgn0050360.1.mrna1;Target=FBgn0050360.1 1758 1821 +
Chr2	stalkie_big_nohaplotig	CDS	3599032	3599598	.	+	0	Parent=FBgn0050360.1.mrna1;Target=FBgn0050360.1 4 570 +
Chr2	stalkie_big_nohaplotig	CDS	3599883	3600476	.	+	0	Parent=FBgn0050360.1.mrna1;Target=FBgn0050360.1 571 1164 +
Chr2	stalkie_big_nohaplotig	CDS	3600556	3600663	.	+	0	Parent=FBgn0050360.1.mrna1;Target=FBgn0050360.1 1165 1272 +
Chr2	stalkie_big_nohaplotig	CDS	3600716	3601059	.	+	0	Parent=FBgn0050360.1.mrna1;Target=FBgn0050360.1 1273 1616 +
Chr2	stalkie_big_nohaplotig	CDS	3601231	3601371	.	+	1	Parent=FBgn0050360.1.mrna1;Target=FBgn0050360.1 1617 1757 +
Chr2	stalkie_big_nohaplotig	CDS	3601459	3601522	.	+	1	Parent=FBgn0050360.1.mrna1;Target=FBgn0050360.1 1758 1821 +
Chr2	stalkie_big_nohaplotig	mRNA	3599575	3599905	.	+	.	ID=comp146420_c0_seq1.mrna3;geneID=comp146420_c0_seq1.path3;Name=comp146420_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.2;matches=318;mismatches=11;indels=5;unknowns=0;Target=comp146420_c0_seq1 332 1 .;CDS_Target=comp146420_c0_seq1 189 157 .;locus=RLOC_00014173
Chr2	stalkie_big_nohaplotig	exon	3599575	3599905	95	+	.	Parent=comp146420_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	CDS	3599730	3599762	.	+	0	Parent=comp146420_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	3601036	3601276	.	+	.	ID=comp150213_c0_seq1.mrna1;geneID=comp150213_c0_seq1.path1;Name=comp150213_c0_seq1;Dir=indeterminatecoverage=99.6;identity=97.1;matches=234;mismatches=7;indels=0;unknowns=0;Target=comp150213_c0_seq1 241 1 .;CDS_Target=comp150213_c0_seq1 239 126 .;locus=RLOC_00014173
Chr2	stalkie_big_nohaplotig	exon	3601036	3601276	97	+	.	Parent=comp150213_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	3601161	3601274	.	+	0	Parent=comp150213_c0_seq1.mrna1
Chr2	gffcl	locus	3646765	3648656	.	-	.	ID=RLOC_00014174;geneIDs=comp150681_c0_seq1.path1;transcripts=comp150681_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3646765	3648656	.	-	.	ID=comp150681_c0_seq1.mrna1;geneID=comp150681_c0_seq1.path1;Name=comp150681_c0_seq1;Dir=sensecoverage=99.7;identity=99.9;matches=791;mismatches=1;indels=0;unknowns=0;Target=comp150681_c0_seq1 2 118 +;locus=RLOC_00014174
Chr2	stalkie_big_nohaplotig	exon	3646765	3647234	99	-	.	Parent=comp150681_c0_seq1.mrna1;Target=comp150681_c0_seq1 324 793 +
Chr2	stalkie_big_nohaplotig	exon	3648335	3648656	100	-	.	Parent=comp150681_c0_seq1.mrna1;Target=comp150681_c0_seq1 2 323 +
Chr2	stalkie_big_nohaplotig	CDS	3648540	3648656	.	-	0	Parent=comp150681_c0_seq1.mrna1
Chr2	gffcl	locus	3756628	3759913	.	.	.	ID=RLOC_00014176;geneIDs=FBgn0033296.1.path1,comp138174_c0_seq1.path1;transcripts=FBgn0033296.1.mrna1,comp138174_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3756628	3759913	.	-	.	ID=FBgn0033296.1.mrna1;geneID=FBgn0033296.1.path1;Name=FBgn0033296.1;Dir=sensecoverage=100.0;identity=99.0;matches=1782;mismatches=18;indels=0;unknowns=0;locus=RLOC_00014176
Chr2	stalkie_big_nohaplotig	exon	3756628	3756691	98	-	.	Parent=FBgn0033296.1.mrna1;Target=FBgn0033296.1 1737 1800 +
Chr2	stalkie_big_nohaplotig	exon	3756762	3756908	97	-	.	Parent=FBgn0033296.1.mrna1;Target=FBgn0033296.1 1590 1736 +
Chr2	stalkie_big_nohaplotig	exon	3758014	3758212	99	-	.	Parent=FBgn0033296.1.mrna1;Target=FBgn0033296.1 1391 1589 +
Chr2	stalkie_big_nohaplotig	exon	3758300	3758447	99	-	.	Parent=FBgn0033296.1.mrna1;Target=FBgn0033296.1 1243 1390 +
Chr2	stalkie_big_nohaplotig	exon	3758547	3758654	100	-	.	Parent=FBgn0033296.1.mrna1;Target=FBgn0033296.1 1135 1242 +
Chr2	stalkie_big_nohaplotig	exon	3758719	3759297	98	-	.	Parent=FBgn0033296.1.mrna1;Target=FBgn0033296.1 556 1134 +
Chr2	stalkie_big_nohaplotig	exon	3759359	3759913	98	-	.	Parent=FBgn0033296.1.mrna1;Target=FBgn0033296.1 1 555 +
Chr2	stalkie_big_nohaplotig	CDS	3756628	3756691	.	-	1	Parent=FBgn0033296.1.mrna1;Target=FBgn0033296.1 1737 1800 +
Chr2	stalkie_big_nohaplotig	CDS	3756762	3756908	.	-	1	Parent=FBgn0033296.1.mrna1;Target=FBgn0033296.1 1590 1736 +
Chr2	stalkie_big_nohaplotig	CDS	3758014	3758212	.	-	2	Parent=FBgn0033296.1.mrna1;Target=FBgn0033296.1 1391 1589 +
Chr2	stalkie_big_nohaplotig	CDS	3758300	3758447	.	-	0	Parent=FBgn0033296.1.mrna1;Target=FBgn0033296.1 1243 1390 +
Chr2	stalkie_big_nohaplotig	CDS	3758547	3758654	.	-	0	Parent=FBgn0033296.1.mrna1;Target=FBgn0033296.1 1135 1242 +
Chr2	stalkie_big_nohaplotig	CDS	3758719	3759297	.	-	0	Parent=FBgn0033296.1.mrna1;Target=FBgn0033296.1 556 1134 +
Chr2	stalkie_big_nohaplotig	CDS	3759359	3759913	.	-	0	Parent=FBgn0033296.1.mrna1;Target=FBgn0033296.1 1 555 +
Chr2	stalkie_big_nohaplotig	mRNA	3756888	3758009	.	+	.	ID=comp138174_c0_seq1.mrna1;geneID=comp138174_c0_seq1.path1;Name=comp138174_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.2;matches=1090;mismatches=31;indels=12;unknowns=0;Target=comp138174_c0_seq1 1132 1 .;CDS_Target=comp138174_c0_seq1 1105 899 .;locus=RLOC_00014176
Chr2	stalkie_big_nohaplotig	exon	3756888	3758009	96	+	.	Parent=comp138174_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	3757776	3757982	.	+	0	Parent=comp138174_c0_seq1.mrna1
Chr2	gffcl	locus	3782868	3783337	.	-	.	ID=RLOC_00014177;geneIDs=FBgn0002533.2.path1,comp142523_c0_seq1.path1;transcripts=FBgn0002533.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3783056	3783337	.	-	.	ID=FBgn0002533.2.mrna1;geneID=FBgn0002533.2.path1;Name=FBgn0002533.2;Dir=indeterminatecoverage=98.9;identity=100.0;matches=282;mismatches=0;indels=0;unknowns=0;Target=FBgn0002533.2 285 4 .;locus=RLOC_00014177
Chr2	stalkie_big_nohaplotig	exon	3783056	3783337	100	-	.	Parent=FBgn0002533.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	3783056	3783337	.	-	0	Parent=FBgn0002533.2.mrna1
Chr2	gffcl	locus	3784110	3784725	.	+	.	ID=RLOC_00014178;geneIDs=FBgn0002533.3.path1;transcripts=FBgn0002533.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3784110	3784725	.	+	.	ID=FBgn0002533.3.mrna1;geneID=FBgn0002533.3.path1;Name=FBgn0002533.3;Dir=sensecoverage=100.0;identity=100.0;matches=555;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014178
Chr2	stalkie_big_nohaplotig	exon	3784110	3784193	100	+	.	Parent=FBgn0002533.3.mrna1;Target=FBgn0002533.3 1 84 +
Chr2	stalkie_big_nohaplotig	exon	3784255	3784725	100	+	.	Parent=FBgn0002533.3.mrna1;Target=FBgn0002533.3 85 555 +
Chr2	stalkie_big_nohaplotig	CDS	3784110	3784193	.	+	0	Parent=FBgn0002533.3.mrna1;Target=FBgn0002533.3 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	3784255	3784725	.	+	0	Parent=FBgn0002533.3.mrna1;Target=FBgn0002533.3 85 555 +
Chr2	gffcl	locus	3790318	3792103	.	-	.	ID=RLOC_00014179;geneIDs=comp159156_c1_seq1.path1;transcripts=comp159156_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3790318	3792103	.	-	.	ID=comp159156_c1_seq1.mrna1;geneID=comp159156_c1_seq1.path1;Name=comp159156_c1_seq1;Dir=antisensecoverage=91.1;identity=99.2;matches=1559;mismatches=12;indels=0;unknowns=0;Target=comp159156_c1_seq1 1085 1579 .;locus=RLOC_00014179
Chr2	stalkie_big_nohaplotig	exon	3790318	3790943	99	-	.	Parent=comp159156_c1_seq1.mrna1;Target=comp159156_c1_seq1 79 704 -
Chr2	stalkie_big_nohaplotig	exon	3791002	3791188	100	-	.	Parent=comp159156_c1_seq1.mrna1;Target=comp159156_c1_seq1 705 891 -
Chr2	stalkie_big_nohaplotig	exon	3791265	3791389	98	-	.	Parent=comp159156_c1_seq1.mrna1;Target=comp159156_c1_seq1 892 1016 -
Chr2	stalkie_big_nohaplotig	exon	3791471	3792103	99	-	.	Parent=comp159156_c1_seq1.mrna1;Target=comp159156_c1_seq1 1017 1649 -
Chr2	stalkie_big_nohaplotig	CDS	3791539	3792033	.	-	0	Parent=comp159156_c1_seq1.mrna1
Chr2	gffcl	locus	3800796	3803529	.	+	.	ID=RLOC_00014180;geneIDs=FBgn0033302.1.path1;transcripts=FBgn0033302.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3800796	3803529	.	+	.	ID=FBgn0033302.1.mrna1;geneID=FBgn0033302.1.path1;Name=FBgn0033302.1;Dir=sensecoverage=100.0;identity=99.6;matches=1602;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014180
Chr2	stalkie_big_nohaplotig	exon	3800796	3801987	99	+	.	Parent=FBgn0033302.1.mrna1;Target=FBgn0033302.1 1 1192 +
Chr2	stalkie_big_nohaplotig	exon	3803114	3803529	100	+	.	Parent=FBgn0033302.1.mrna1;Target=FBgn0033302.1 1193 1608 +
Chr2	stalkie_big_nohaplotig	CDS	3800796	3801987	.	+	0	Parent=FBgn0033302.1.mrna1;Target=FBgn0033302.1 1 1192 +
Chr2	stalkie_big_nohaplotig	CDS	3803114	3803529	.	+	2	Parent=FBgn0033302.1.mrna1;Target=FBgn0033302.1 1193 1608 +
Chr2	gffcl	locus	3805000	3806297	.	+	.	ID=RLOC_00014181;geneIDs=FBgn0033304.3.path1;transcripts=FBgn0033304.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3805000	3806297	.	+	.	ID=FBgn0033304.3.mrna1;geneID=FBgn0033304.3.path1;Name=FBgn0033304.3;Dir=sensecoverage=100.0;identity=98.9;matches=1225;mismatches=13;indels=1;unknowns=0;Target=FBgn0033304.3 3 44 +;locus=RLOC_00014181
Chr2	stalkie_big_nohaplotig	exon	3805000	3805824	98	+	.	Parent=FBgn0033304.3.mrna1;Target=FBgn0033304.3 1 826 +
Chr2	stalkie_big_nohaplotig	exon	3805885	3806297	99	+	.	Parent=FBgn0033304.3.mrna1;Target=FBgn0033304.3 827 1239 +
Chr2	stalkie_big_nohaplotig	CDS	3805002	3805042	.	+	0	Parent=FBgn0033304.3.mrna1
Chr2	gffcl	locus	3806984	3808583	.	+	.	ID=RLOC_00014182;geneIDs=FBgn0033304.4.path1;transcripts=FBgn0033304.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3806984	3808583	.	+	.	ID=FBgn0033304.4.mrna1;geneID=FBgn0033304.4.path1;Name=FBgn0033304.4;Dir=sensecoverage=100.0;identity=98.9;matches=1513;mismatches=16;indels=1;unknowns=0;locus=RLOC_00014182
Chr2	stalkie_big_nohaplotig	exon	3806984	3808099	98	+	.	Parent=FBgn0033304.4.mrna1;Target=FBgn0033304.4 1 1117 +
Chr2	stalkie_big_nohaplotig	exon	3808171	3808583	99	+	.	Parent=FBgn0033304.4.mrna1;Target=FBgn0033304.4 1118 1530 +
Chr2	stalkie_big_nohaplotig	CDS	3806984	3808099	.	+	0	Parent=FBgn0033304.4.mrna1;Target=FBgn0033304.4 1 1117 +
Chr2	stalkie_big_nohaplotig	CDS	3808171	3808583	.	+	0	Parent=FBgn0033304.4.mrna1;Target=FBgn0033304.4 1118 1530 +
Chr2	gffcl	locus	3810844	3812443	.	+	.	ID=RLOC_00014183;geneIDs=FBgn0033978.1.path1;transcripts=FBgn0033978.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3810844	3812443	.	+	.	ID=FBgn0033978.1.mrna1;geneID=FBgn0033978.1.path1;Name=FBgn0033978.1;Dir=sensecoverage=100.0;identity=99.0;matches=1524;mismatches=15;indels=0;unknowns=0;locus=RLOC_00014183
Chr2	stalkie_big_nohaplotig	exon	3810844	3811969	99	+	.	Parent=FBgn0033978.1.mrna1;Target=FBgn0033978.1 1 1126 +
Chr2	stalkie_big_nohaplotig	exon	3812031	3812443	98	+	.	Parent=FBgn0033978.1.mrna1;Target=FBgn0033978.1 1127 1539 +
Chr2	stalkie_big_nohaplotig	CDS	3810844	3811969	.	+	0	Parent=FBgn0033978.1.mrna1;Target=FBgn0033978.1 1 1126 +
Chr2	stalkie_big_nohaplotig	CDS	3812031	3812443	.	+	2	Parent=FBgn0033978.1.mrna1;Target=FBgn0033978.1 1127 1539 +
Chr2	gffcl	locus	3813142	3814749	.	+	.	ID=RLOC_00014184;geneIDs=FBgn0033978.4.path1;transcripts=FBgn0033978.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3813142	3814749	.	+	.	ID=FBgn0033978.4.mrna1;geneID=FBgn0033978.4.path1;Name=FBgn0033978.4;Dir=sensecoverage=100.0;identity=99.2;matches=1532;mismatches=13;indels=0;unknowns=0;locus=RLOC_00014184
Chr2	stalkie_big_nohaplotig	exon	3813142	3814270	99	+	.	Parent=FBgn0033978.4.mrna1;Target=FBgn0033978.4 1 1129 +
Chr2	stalkie_big_nohaplotig	exon	3814334	3814749	98	+	.	Parent=FBgn0033978.4.mrna1;Target=FBgn0033978.4 1130 1545 +
Chr2	stalkie_big_nohaplotig	CDS	3813142	3814270	.	+	0	Parent=FBgn0033978.4.mrna1;Target=FBgn0033978.4 1 1129 +
Chr2	stalkie_big_nohaplotig	CDS	3814334	3814749	.	+	2	Parent=FBgn0033978.4.mrna1;Target=FBgn0033978.4 1130 1545 +
Chr2	gffcl	locus	3818431	3820001	.	+	.	ID=RLOC_00014185;geneIDs=FBgn0033978.2.path1;transcripts=FBgn0033978.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3818431	3820001	.	+	.	ID=FBgn0033978.2.mrna1;geneID=FBgn0033978.2.path1;Name=FBgn0033978.2;Dir=sensecoverage=99.9;identity=99.3;matches=1510;mismatches=10;indels=0;unknowns=0;locus=RLOC_00014185
Chr2	stalkie_big_nohaplotig	exon	3818431	3819537	99	+	.	Parent=FBgn0033978.2.mrna1;Target=FBgn0033978.2 2 1108 +
Chr2	stalkie_big_nohaplotig	exon	3819589	3820001	100	+	.	Parent=FBgn0033978.2.mrna1;Target=FBgn0033978.2 1109 1521 +
Chr2	stalkie_big_nohaplotig	CDS	3818433	3819537	.	+	0	Parent=FBgn0033978.2.mrna1;Target=FBgn0033978.2 4 1108 +
Chr2	stalkie_big_nohaplotig	CDS	3819589	3820001	.	+	2	Parent=FBgn0033978.2.mrna1;Target=FBgn0033978.2 1109 1521 +
Chr2	gffcl	locus	3822596	3823744	.	-	.	ID=RLOC_00014186;geneIDs=FBgn0013771.1.path1;transcripts=FBgn0013771.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3822596	3823744	.	-	.	ID=FBgn0013771.1.mrna1;geneID=FBgn0013771.1.path1;Name=FBgn0013771.1;Dir=sensecoverage=100.0;identity=99.4;matches=1080;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014186
Chr2	stalkie_big_nohaplotig	exon	3822596	3823011	100	-	.	Parent=FBgn0013771.1.mrna1;Target=FBgn0013771.1 671 1086 +
Chr2	stalkie_big_nohaplotig	exon	3823075	3823744	99	-	.	Parent=FBgn0013771.1.mrna1;Target=FBgn0013771.1 1 670 +
Chr2	stalkie_big_nohaplotig	CDS	3822596	3823011	.	-	2	Parent=FBgn0013771.1.mrna1;Target=FBgn0013771.1 671 1086 +
Chr2	stalkie_big_nohaplotig	CDS	3823075	3823744	.	-	0	Parent=FBgn0013771.1.mrna1;Target=FBgn0013771.1 1 670 +
Chr2	gffcl	locus	3826546	3828157	.	+	.	ID=RLOC_00014187;geneIDs=FBgn0015714.1.path1;transcripts=FBgn0015714.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3826546	3828157	.	+	.	ID=FBgn0015714.1.mrna1;geneID=FBgn0015714.1.path1;Name=FBgn0015714.1;Dir=sensecoverage=99.2;identity=99.4;matches=1541;mismatches=10;indels=0;unknowns=0;locus=RLOC_00014187
Chr2	stalkie_big_nohaplotig	exon	3826546	3827683	99	+	.	Parent=FBgn0015714.1.mrna1;Target=FBgn0015714.1 13 1150 +
Chr2	stalkie_big_nohaplotig	exon	3827745	3828157	99	+	.	Parent=FBgn0015714.1.mrna1;Target=FBgn0015714.1 1151 1563 +
Chr2	stalkie_big_nohaplotig	CDS	3826546	3827683	.	+	0	Parent=FBgn0015714.1.mrna1;Target=FBgn0015714.1 13 1150 +
Chr2	stalkie_big_nohaplotig	CDS	3827745	3828157	.	+	2	Parent=FBgn0015714.1.mrna1;Target=FBgn0015714.1 1151 1563 +
Chr2	gffcl	locus	3829980	3849192	.	+	.	ID=RLOC_00014188;geneIDs=FBgn0013771.4.path1;transcripts=FBgn0013771.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3829980	3849192	.	+	.	ID=FBgn0013771.4.mrna1;geneID=FBgn0013771.4.path1;Name=FBgn0013771.4;Dir=antisensecoverage=100.0;identity=99.1;matches=1546;mismatches=14;indels=0;unknowns=0;locus=RLOC_00014188
Chr2	stalkie_big_nohaplotig	exon	3829980	3830391	99	+	.	Parent=FBgn0013771.4.mrna1;Target=FBgn0013771.4 1149 1560 -
Chr2	stalkie_big_nohaplotig	exon	3830454	3831143	98	+	.	Parent=FBgn0013771.4.mrna1;Target=FBgn0013771.4 459 1148 -
Chr2	stalkie_big_nohaplotig	exon	3848735	3849192	98	+	.	Parent=FBgn0013771.4.mrna1;Target=FBgn0013771.4 1 458 -
Chr2	stalkie_big_nohaplotig	CDS	3831063	3831143	.	+	0	Parent=FBgn0013771.4.mrna1;Target=FBgn0013771.4 459 539 .
Chr2	stalkie_big_nohaplotig	CDS	3848735	3848827	.	+	0	Parent=FBgn0013771.4.mrna1;Target=FBgn0013771.4 366 458 .
Chr2	gffcl	locus	3836970	3837301	.	+	.	ID=RLOC_00014190;geneIDs=comp151658_c0_seq1.path1;transcripts=comp151658_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3836970	3837301	.	+	.	ID=comp151658_c0_seq1.mrna1;geneID=comp151658_c0_seq1.path1;Name=comp151658_c0_seq1;Dir=indeterminatecoverage=95.7;identity=99.1;matches=329;mismatches=2;indels=1;unknowns=0;Target=comp151658_c0_seq1 331 1 .;CDS_Target=comp151658_c0_seq1 172 71 .;locus=RLOC_00014190
Chr2	stalkie_big_nohaplotig	exon	3836970	3837301	99	+	.	Parent=comp151658_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	3837040	3837142	.	+	0	Parent=comp151658_c0_seq1.mrna1
Chr2	gffcl	locus	3837782	3839370	.	-	.	ID=RLOC_00014191;geneIDs=FBgn0013771.3.path1;transcripts=FBgn0013771.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3837782	3839370	.	-	.	ID=FBgn0013771.3.mrna1;geneID=FBgn0013771.3.path1;Name=FBgn0013771.3;Dir=sensecoverage=100.0;identity=99.3;matches=1517;mismatches=10;indels=0;unknowns=0;locus=RLOC_00014191
Chr2	stalkie_big_nohaplotig	exon	3837782	3838197	99	-	.	Parent=FBgn0013771.3.mrna1;Target=FBgn0013771.3 1112 1527 +
Chr2	stalkie_big_nohaplotig	exon	3838260	3839370	99	-	.	Parent=FBgn0013771.3.mrna1;Target=FBgn0013771.3 1 1111 +
Chr2	stalkie_big_nohaplotig	CDS	3837782	3838197	.	-	2	Parent=FBgn0013771.3.mrna1;Target=FBgn0013771.3 1112 1527 +
Chr2	stalkie_big_nohaplotig	CDS	3838260	3839370	.	-	0	Parent=FBgn0013771.3.mrna1;Target=FBgn0013771.3 1 1111 +
Chr2	gffcl	locus	3844923	3846579	.	-	.	ID=RLOC_00014192;geneIDs=FBgn0013771.2.path1;transcripts=FBgn0013771.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3844923	3846579	.	-	.	ID=FBgn0013771.2.mrna1;geneID=FBgn0013771.2.path1;Name=FBgn0013771.2;Dir=sensecoverage=100.0;identity=99.7;matches=1588;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014192
Chr2	stalkie_big_nohaplotig	exon	3844923	3845338	100	-	.	Parent=FBgn0013771.2.mrna1;Target=FBgn0013771.2 1178 1593 +
Chr2	stalkie_big_nohaplotig	exon	3845403	3846579	99	-	.	Parent=FBgn0013771.2.mrna1;Target=FBgn0013771.2 1 1177 +
Chr2	stalkie_big_nohaplotig	CDS	3844923	3845338	.	-	2	Parent=FBgn0013771.2.mrna1;Target=FBgn0013771.2 1178 1593 +
Chr2	stalkie_big_nohaplotig	CDS	3845403	3846579	.	-	0	Parent=FBgn0013771.2.mrna1;Target=FBgn0013771.2 1 1177 +
Chr2	gffcl	locus	3847568	3848721	.	-	.	ID=RLOC_00014193;geneIDs=FBgn0039519.2.path1;transcripts=FBgn0039519.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3847568	3848721	.	-	.	ID=FBgn0039519.2.mrna1;geneID=FBgn0039519.2.path1;Name=FBgn0039519.2;Dir=sensecoverage=100.0;identity=99.4;matches=1082;mismatches=7;indels=0;unknowns=0;locus=RLOC_00014193
Chr2	stalkie_big_nohaplotig	exon	3847568	3847983	99	-	.	Parent=FBgn0039519.2.mrna1;Target=FBgn0039519.2 674 1089 +
Chr2	stalkie_big_nohaplotig	exon	3848049	3848721	99	-	.	Parent=FBgn0039519.2.mrna1;Target=FBgn0039519.2 1 673 +
Chr2	stalkie_big_nohaplotig	CDS	3847568	3847983	.	-	2	Parent=FBgn0039519.2.mrna1;Target=FBgn0039519.2 674 1089 +
Chr2	stalkie_big_nohaplotig	CDS	3848049	3848721	.	-	0	Parent=FBgn0039519.2.mrna1;Target=FBgn0039519.2 1 673 +
Chr2	gffcl	locus	3855708	3857337	.	-	.	ID=RLOC_00014194;geneIDs=FBgn0000473.1.path1;transcripts=FBgn0000473.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3855708	3857337	.	-	.	ID=FBgn0000473.1.mrna1;geneID=FBgn0000473.1.path1;Name=FBgn0000473.1;Dir=sensecoverage=100.0;identity=99.2;matches=1557;mismatches=9;indels=3;unknowns=0;locus=RLOC_00014194
Chr2	stalkie_big_nohaplotig	exon	3855708	3856123	100	-	.	Parent=FBgn0000473.1.mrna1;Target=FBgn0000473.1 1154 1569 +
Chr2	stalkie_big_nohaplotig	exon	3856188	3857337	98	-	.	Parent=FBgn0000473.1.mrna1;Target=FBgn0000473.1 1 1153 +
Chr2	stalkie_big_nohaplotig	CDS	3855708	3856123	.	-	2	Parent=FBgn0000473.1.mrna1;Target=FBgn0000473.1 1154 1569 +
Chr2	stalkie_big_nohaplotig	CDS	3856188	3857337	.	-	0	Parent=FBgn0000473.1.mrna1;Target=FBgn0000473.1 1 1153 +
Chr2	gffcl	locus	3871040	3872729	.	+	.	ID=RLOC_00014195;geneIDs=FBgn0033982.1.path1;transcripts=FBgn0033982.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3871040	3872729	.	+	.	ID=FBgn0033982.1.mrna1;geneID=FBgn0033982.1.path1;Name=FBgn0033982.1;Dir=sensecoverage=100.0;identity=99.4;matches=1610;mismatches=10;indels=0;unknowns=0;locus=RLOC_00014195
Chr2	stalkie_big_nohaplotig	exon	3871040	3872234	99	+	.	Parent=FBgn0033982.1.mrna1;Target=FBgn0033982.1 1 1195 +
Chr2	stalkie_big_nohaplotig	exon	3872305	3872729	97	+	.	Parent=FBgn0033982.1.mrna1;Target=FBgn0033982.1 1196 1620 +
Chr2	stalkie_big_nohaplotig	CDS	3871040	3872234	.	+	0	Parent=FBgn0033982.1.mrna1;Target=FBgn0033982.1 1 1195 +
Chr2	stalkie_big_nohaplotig	CDS	3872305	3872729	.	+	2	Parent=FBgn0033982.1.mrna1;Target=FBgn0033982.1 1196 1620 +
Chr2	gffcl	locus	3876620	3918487	.	-	.	ID=RLOC_00014197;geneIDs=FBgn0027596.1.path1;transcripts=FBgn0027596.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3876620	3918487	.	-	.	ID=FBgn0027596.1.mrna1;geneID=FBgn0027596.1.path1;Name=FBgn0027596.1;Dir=sensecoverage=100.0;identity=99.4;matches=3925;mismatches=22;indels=0;unknowns=0;locus=RLOC_00014197
Chr2	stalkie_big_nohaplotig	exon	3876620	3876774	99	-	.	Parent=FBgn0027596.1.mrna1;Target=FBgn0027596.1 3793 3947 +
Chr2	stalkie_big_nohaplotig	exon	3876847	3877047	100	-	.	Parent=FBgn0027596.1.mrna1;Target=FBgn0027596.1 3592 3792 +
Chr2	stalkie_big_nohaplotig	exon	3877126	3877338	100	-	.	Parent=FBgn0027596.1.mrna1;Target=FBgn0027596.1 3379 3591 +
Chr2	stalkie_big_nohaplotig	exon	3877402	3877648	100	-	.	Parent=FBgn0027596.1.mrna1;Target=FBgn0027596.1 3132 3378 +
Chr2	stalkie_big_nohaplotig	exon	3877707	3878225	99	-	.	Parent=FBgn0027596.1.mrna1;Target=FBgn0027596.1 2613 3131 +
Chr2	stalkie_big_nohaplotig	exon	3879151	3880586	99	-	.	Parent=FBgn0027596.1.mrna1;Target=FBgn0027596.1 1177 2612 +
Chr2	stalkie_big_nohaplotig	exon	3880650	3881062	99	-	.	Parent=FBgn0027596.1.mrna1;Target=FBgn0027596.1 764 1176 +
Chr2	stalkie_big_nohaplotig	exon	3886541	3886979	99	-	.	Parent=FBgn0027596.1.mrna1;Target=FBgn0027596.1 325 763 +
Chr2	stalkie_big_nohaplotig	exon	3887704	3887936	100	-	.	Parent=FBgn0027596.1.mrna1;Target=FBgn0027596.1 92 324 +
Chr2	stalkie_big_nohaplotig	exon	3896221	3896264	100	-	.	Parent=FBgn0027596.1.mrna1;Target=FBgn0027596.1 48 91 +
Chr2	stalkie_big_nohaplotig	exon	3918441	3918487	93	-	.	Parent=FBgn0027596.1.mrna1;Target=FBgn0027596.1 1 47 +
Chr2	stalkie_big_nohaplotig	CDS	3876622	3876774	.	-	0	Parent=FBgn0027596.1.mrna1;Target=FBgn0027596.1 3793 3945 +
Chr2	stalkie_big_nohaplotig	CDS	3876847	3877047	.	-	0	Parent=FBgn0027596.1.mrna1;Target=FBgn0027596.1 3592 3792 +
Chr2	stalkie_big_nohaplotig	CDS	3877126	3877338	.	-	0	Parent=FBgn0027596.1.mrna1;Target=FBgn0027596.1 3379 3591 +
Chr2	stalkie_big_nohaplotig	CDS	3877402	3877648	.	-	1	Parent=FBgn0027596.1.mrna1;Target=FBgn0027596.1 3132 3378 +
Chr2	stalkie_big_nohaplotig	CDS	3877707	3878225	.	-	1	Parent=FBgn0027596.1.mrna1;Target=FBgn0027596.1 2613 3131 +
Chr2	stalkie_big_nohaplotig	CDS	3879151	3880586	.	-	0	Parent=FBgn0027596.1.mrna1;Target=FBgn0027596.1 1177 2612 +
Chr2	stalkie_big_nohaplotig	CDS	3880650	3881062	.	-	2	Parent=FBgn0027596.1.mrna1;Target=FBgn0027596.1 764 1176 +
Chr2	stalkie_big_nohaplotig	CDS	3886541	3886979	.	-	0	Parent=FBgn0027596.1.mrna1;Target=FBgn0027596.1 325 763 +
Chr2	stalkie_big_nohaplotig	CDS	3887704	3887936	.	-	2	Parent=FBgn0027596.1.mrna1;Target=FBgn0027596.1 92 324 +
Chr2	stalkie_big_nohaplotig	CDS	3896221	3896264	.	-	1	Parent=FBgn0027596.1.mrna1;Target=FBgn0027596.1 48 91 +
Chr2	stalkie_big_nohaplotig	CDS	3918441	3918487	.	-	0	Parent=FBgn0027596.1.mrna1;Target=FBgn0027596.1 1 47 +
Chr2	gffcl	locus	3882562	3882838	.	-	.	ID=RLOC_00014198;geneIDs=comp143632_c0_seq1.path1;transcripts=comp143632_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3882562	3882838	.	-	.	ID=comp143632_c0_seq1.mrna1;geneID=comp143632_c0_seq1.path1;Name=comp143632_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=271;mismatches=5;indels=1;unknowns=0;Target=comp143632_c0_seq1 276 1 .;CDS_Target=comp143632_c0_seq1 55 2 .;locus=RLOC_00014198
Chr2	stalkie_big_nohaplotig	exon	3882562	3882838	97	-	.	Parent=comp143632_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	3882784	3882837	.	-	0	Parent=comp143632_c0_seq1.mrna1
Chr2	gffcl	locus	3930236	3934230	.	-	.	ID=RLOC_00014199;geneIDs=FBgn0033983.1.path1;transcripts=FBgn0033983.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3930236	3934230	.	-	.	ID=FBgn0033983.1.mrna1;geneID=FBgn0033983.1.path1;Name=FBgn0033983.1;Dir=sensecoverage=100.0;identity=99.6;matches=2029;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014199
Chr2	stalkie_big_nohaplotig	exon	3930236	3930649	100	-	.	Parent=FBgn0033983.1.mrna1;Target=FBgn0033983.1 1624 2037 +
Chr2	stalkie_big_nohaplotig	exon	3930869	3930973	100	-	.	Parent=FBgn0033983.1.mrna1;Target=FBgn0033983.1 1519 1623 +
Chr2	stalkie_big_nohaplotig	exon	3931045	3932230	99	-	.	Parent=FBgn0033983.1.mrna1;Target=FBgn0033983.1 333 1518 +
Chr2	stalkie_big_nohaplotig	exon	3932671	3932757	100	-	.	Parent=FBgn0033983.1.mrna1;Target=FBgn0033983.1 246 332 +
Chr2	stalkie_big_nohaplotig	exon	3933986	3934230	99	-	.	Parent=FBgn0033983.1.mrna1;Target=FBgn0033983.1 1 245 +
Chr2	stalkie_big_nohaplotig	CDS	3930236	3930649	.	-	0	Parent=FBgn0033983.1.mrna1;Target=FBgn0033983.1 1624 2037 +
Chr2	stalkie_big_nohaplotig	CDS	3930869	3930973	.	-	0	Parent=FBgn0033983.1.mrna1;Target=FBgn0033983.1 1519 1623 +
Chr2	stalkie_big_nohaplotig	CDS	3931045	3932230	.	-	1	Parent=FBgn0033983.1.mrna1;Target=FBgn0033983.1 333 1518 +
Chr2	stalkie_big_nohaplotig	CDS	3932671	3932757	.	-	1	Parent=FBgn0033983.1.mrna1;Target=FBgn0033983.1 246 332 +
Chr2	stalkie_big_nohaplotig	CDS	3933986	3934230	.	-	0	Parent=FBgn0033983.1.mrna1;Target=FBgn0033983.1 1 245 +
Chr2	gffcl	locus	3944122	3952968	.	+	.	ID=RLOC_00014200;geneIDs=FBgn0033110.4.path1,comp162782_c0_seq1.path1;transcripts=comp162782_c0_seq1.mrna1,FBgn0033110.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3944122	3947032	.	+	.	ID=comp162782_c0_seq1.mrna1;geneID=comp162782_c0_seq1.path1;Name=comp162782_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=2068;mismatches=12;indels=0;unknowns=0;locus=RLOC_00014200
Chr2	stalkie_big_nohaplotig	exon	3944122	3944245	98	+	.	Parent=comp162782_c0_seq1.mrna1;Target=comp162782_c0_seq1 1957 2080 -
Chr2	stalkie_big_nohaplotig	exon	3944461	3944750	98	+	.	Parent=comp162782_c0_seq1.mrna1;Target=comp162782_c0_seq1 1667 1956 -
Chr2	stalkie_big_nohaplotig	exon	3944815	3944986	100	+	.	Parent=comp162782_c0_seq1.mrna1;Target=comp162782_c0_seq1 1495 1666 -
Chr2	stalkie_big_nohaplotig	exon	3945054	3945197	99	+	.	Parent=comp162782_c0_seq1.mrna1;Target=comp162782_c0_seq1 1351 1494 -
Chr2	stalkie_big_nohaplotig	exon	3945442	3946035	99	+	.	Parent=comp162782_c0_seq1.mrna1;Target=comp162782_c0_seq1 757 1350 -
Chr2	stalkie_big_nohaplotig	exon	3946094	3946173	100	+	.	Parent=comp162782_c0_seq1.mrna1;Target=comp162782_c0_seq1 677 756 -
Chr2	stalkie_big_nohaplotig	exon	3946236	3946349	98	+	.	Parent=comp162782_c0_seq1.mrna1;Target=comp162782_c0_seq1 563 676 -
Chr2	stalkie_big_nohaplotig	exon	3946420	3946757	99	+	.	Parent=comp162782_c0_seq1.mrna1;Target=comp162782_c0_seq1 225 562 -
Chr2	stalkie_big_nohaplotig	exon	3946809	3947032	100	+	.	Parent=comp162782_c0_seq1.mrna1;Target=comp162782_c0_seq1 1 224 -
Chr2	stalkie_big_nohaplotig	CDS	3944173	3944245	.	+	0	Parent=comp162782_c0_seq1.mrna1;Target=comp162782_c0_seq1 1957 2029 .
Chr2	stalkie_big_nohaplotig	CDS	3944461	3944750	.	+	2	Parent=comp162782_c0_seq1.mrna1;Target=comp162782_c0_seq1 1667 1956 .
Chr2	stalkie_big_nohaplotig	CDS	3944815	3944986	.	+	0	Parent=comp162782_c0_seq1.mrna1;Target=comp162782_c0_seq1 1495 1666 .
Chr2	stalkie_big_nohaplotig	CDS	3945054	3945197	.	+	2	Parent=comp162782_c0_seq1.mrna1;Target=comp162782_c0_seq1 1351 1494 .
Chr2	stalkie_big_nohaplotig	CDS	3945442	3945863	.	+	2	Parent=comp162782_c0_seq1.mrna1;Target=comp162782_c0_seq1 929 1350 .
Chr2	stalkie_big_nohaplotig	mRNA	3944813	3952968	.	+	.	ID=FBgn0033110.4.mrna1;geneID=FBgn0033110.4.path1;Name=FBgn0033110.4;Dir=sensecoverage=78.3;identity=98.9;matches=1514;mismatches=17;indels=0;unknowns=0;locus=RLOC_00014200
Chr2	stalkie_big_nohaplotig	exon	3944813	3944986	100	+	.	Parent=FBgn0033110.4.mrna1;Target=FBgn0033110.4 365 538 +
Chr2	stalkie_big_nohaplotig	exon	3945054	3945197	99	+	.	Parent=FBgn0033110.4.mrna1;Target=FBgn0033110.4 539 682 +
Chr2	stalkie_big_nohaplotig	exon	3945442	3945814	99	+	.	Parent=FBgn0033110.4.mrna1;Target=FBgn0033110.4 683 1055 +
Chr2	stalkie_big_nohaplotig	exon	3945870	3946035	100	+	.	Parent=FBgn0033110.4.mrna1;Target=FBgn0033110.4 1056 1221 +
Chr2	stalkie_big_nohaplotig	exon	3946094	3946173	100	+	.	Parent=FBgn0033110.4.mrna1;Target=FBgn0033110.4 1222 1301 +
Chr2	stalkie_big_nohaplotig	exon	3946236	3946349	98	+	.	Parent=FBgn0033110.4.mrna1;Target=FBgn0033110.4 1302 1415 +
Chr2	stalkie_big_nohaplotig	exon	3946420	3946628	100	+	.	Parent=FBgn0033110.4.mrna1;Target=FBgn0033110.4 1416 1624 +
Chr2	stalkie_big_nohaplotig	exon	3952647	3952775	98	+	.	Parent=FBgn0033110.4.mrna1;Target=FBgn0033110.4 1625 1753 +
Chr2	stalkie_big_nohaplotig	exon	3952827	3952968	92	+	.	Parent=FBgn0033110.4.mrna1;Target=FBgn0033110.4 1754 1895 +
Chr2	stalkie_big_nohaplotig	CDS	3944815	3944986	.	+	0	Parent=FBgn0033110.4.mrna1;Target=FBgn0033110.4 367 538 +
Chr2	stalkie_big_nohaplotig	CDS	3945054	3945197	.	+	2	Parent=FBgn0033110.4.mrna1;Target=FBgn0033110.4 539 682 +
Chr2	stalkie_big_nohaplotig	CDS	3945442	3945814	.	+	2	Parent=FBgn0033110.4.mrna1;Target=FBgn0033110.4 683 1055 +
Chr2	stalkie_big_nohaplotig	CDS	3945870	3946035	.	+	1	Parent=FBgn0033110.4.mrna1;Target=FBgn0033110.4 1056 1221 +
Chr2	stalkie_big_nohaplotig	CDS	3946094	3946173	.	+	0	Parent=FBgn0033110.4.mrna1;Target=FBgn0033110.4 1222 1301 +
Chr2	stalkie_big_nohaplotig	CDS	3946236	3946349	.	+	1	Parent=FBgn0033110.4.mrna1;Target=FBgn0033110.4 1302 1415 +
Chr2	stalkie_big_nohaplotig	CDS	3946420	3946628	.	+	1	Parent=FBgn0033110.4.mrna1;Target=FBgn0033110.4 1416 1624 +
Chr2	stalkie_big_nohaplotig	CDS	3952647	3952775	.	+	2	Parent=FBgn0033110.4.mrna1;Target=FBgn0033110.4 1625 1753 +
Chr2	stalkie_big_nohaplotig	CDS	3952827	3952966	.	+	2	Parent=FBgn0033110.4.mrna1;Target=FBgn0033110.4 1754 1893 +
Chr2	gffcl	locus	3954292	3958599	.	+	.	ID=RLOC_00014201;geneIDs=FBgn0033110.2.path1;transcripts=FBgn0033110.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3954292	3958599	.	+	.	ID=FBgn0033110.2.mrna1;geneID=FBgn0033110.2.path1;Name=FBgn0033110.2;Dir=sensecoverage=100.0;identity=99.8;matches=2063;mismatches=4;indels=0;unknowns=0;locus=RLOC_00014201
Chr2	stalkie_big_nohaplotig	exon	3954292	3954373	100	+	.	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 1 82 +
Chr2	stalkie_big_nohaplotig	exon	3954433	3954725	100	+	.	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 83 375 +
Chr2	stalkie_big_nohaplotig	exon	3954785	3954950	100	+	.	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 376 541 +
Chr2	stalkie_big_nohaplotig	exon	3955010	3955153	100	+	.	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 542 685 +
Chr2	stalkie_big_nohaplotig	exon	3955234	3955612	98	+	.	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 686 1064 +
Chr2	stalkie_big_nohaplotig	exon	3955730	3955895	100	+	.	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 1065 1230 +
Chr2	stalkie_big_nohaplotig	exon	3957398	3957477	100	+	.	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 1231 1310 +
Chr2	stalkie_big_nohaplotig	exon	3957565	3957678	100	+	.	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 1311 1424 +
Chr2	stalkie_big_nohaplotig	exon	3957769	3958103	100	+	.	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 1425 1759 +
Chr2	stalkie_big_nohaplotig	exon	3958164	3958306	100	+	.	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 1760 1902 +
Chr2	stalkie_big_nohaplotig	exon	3958365	3958479	100	+	.	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 1903 2017 +
Chr2	stalkie_big_nohaplotig	exon	3958550	3958599	100	+	.	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 2018 2067 +
Chr2	stalkie_big_nohaplotig	CDS	3954292	3954373	.	+	0	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 1 82 +
Chr2	stalkie_big_nohaplotig	CDS	3954433	3954725	.	+	2	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 83 375 +
Chr2	stalkie_big_nohaplotig	CDS	3954785	3954950	.	+	0	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 376 541 +
Chr2	stalkie_big_nohaplotig	CDS	3955010	3955153	.	+	2	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 542 685 +
Chr2	stalkie_big_nohaplotig	CDS	3955234	3955612	.	+	2	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 686 1064 +
Chr2	stalkie_big_nohaplotig	CDS	3955730	3955895	.	+	1	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 1065 1230 +
Chr2	stalkie_big_nohaplotig	CDS	3957398	3957477	.	+	0	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 1231 1310 +
Chr2	stalkie_big_nohaplotig	CDS	3957565	3957678	.	+	1	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 1311 1424 +
Chr2	stalkie_big_nohaplotig	CDS	3957769	3958103	.	+	1	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 1425 1759 +
Chr2	stalkie_big_nohaplotig	CDS	3958164	3958306	.	+	2	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 1760 1902 +
Chr2	stalkie_big_nohaplotig	CDS	3958365	3958479	.	+	0	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 1903 2017 +
Chr2	stalkie_big_nohaplotig	CDS	3958550	3958599	.	+	2	Parent=FBgn0033110.2.mrna1;Target=FBgn0033110.2 2018 2067 +
Chr2	gffcl	locus	3960216	3977566	.	+	.	ID=RLOC_00014202;geneIDs=comp162054_c0_seq1.path1;transcripts=comp162054_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3960216	3977566	.	+	.	ID=comp162054_c0_seq1.mrna1;geneID=comp162054_c0_seq1.path1;Name=comp162054_c0_seq1;Dir=antisensecoverage=93.2;identity=99.0;matches=797;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014202
Chr2	stalkie_big_nohaplotig	exon	3960216	3960301	90	+	.	Parent=comp162054_c0_seq1.mrna1;Target=comp162054_c0_seq1 720 805 -
Chr2	stalkie_big_nohaplotig	exon	3960401	3960693	100	+	.	Parent=comp162054_c0_seq1.mrna1;Target=comp162054_c0_seq1 427 719 -
Chr2	stalkie_big_nohaplotig	exon	3960757	3960919	100	+	.	Parent=comp162054_c0_seq1.mrna1;Target=comp162054_c0_seq1 264 426 -
Chr2	stalkie_big_nohaplotig	exon	3968467	3968610	100	+	.	Parent=comp162054_c0_seq1.mrna1;Target=comp162054_c0_seq1 120 263 -
Chr2	stalkie_big_nohaplotig	exon	3977448	3977566	100	+	.	Parent=comp162054_c0_seq1.mrna1;Target=comp162054_c0_seq1 1 119 -
Chr2	stalkie_big_nohaplotig	CDS	3960217	3960301	.	+	0	Parent=comp162054_c0_seq1.mrna1;Target=comp162054_c0_seq1 720 804 .
Chr2	stalkie_big_nohaplotig	CDS	3960401	3960693	.	+	2	Parent=comp162054_c0_seq1.mrna1;Target=comp162054_c0_seq1 427 719 .
Chr2	stalkie_big_nohaplotig	CDS	3960757	3960919	.	+	0	Parent=comp162054_c0_seq1.mrna1;Target=comp162054_c0_seq1 264 426 .
Chr2	stalkie_big_nohaplotig	CDS	3968467	3968610	.	+	2	Parent=comp162054_c0_seq1.mrna1;Target=comp162054_c0_seq1 120 263 .
Chr2	stalkie_big_nohaplotig	CDS	3977448	3977566	.	+	2	Parent=comp162054_c0_seq1.mrna1;Target=comp162054_c0_seq1 1 119 .
Chr2	gffcl	locus	3961774	3963357	.	+	.	ID=RLOC_00014203;geneIDs=comp155125_c0_seq1.path1;transcripts=comp155125_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3961774	3963357	.	+	.	ID=comp155125_c0_seq1.mrna1;geneID=comp155125_c0_seq1.path1;Name=comp155125_c0_seq1;Dir=antisensecoverage=100.0;identity=99.0;matches=1134;mismatches=11;indels=1;unknowns=0;locus=RLOC_00014203
Chr2	stalkie_big_nohaplotig	exon	3961774	3961894	100	+	.	Parent=comp155125_c0_seq1.mrna1;Target=comp155125_c0_seq1 1026 1146 -
Chr2	stalkie_big_nohaplotig	exon	3961951	3962030	100	+	.	Parent=comp155125_c0_seq1.mrna1;Target=comp155125_c0_seq1 946 1025 -
Chr2	stalkie_big_nohaplotig	exon	3962086	3962199	99	+	.	Parent=comp155125_c0_seq1.mrna1;Target=comp155125_c0_seq1 832 945 -
Chr2	stalkie_big_nohaplotig	exon	3962412	3962947	99	+	.	Parent=comp155125_c0_seq1.mrna1;Target=comp155125_c0_seq1 296 831 -
Chr2	stalkie_big_nohaplotig	exon	3963010	3963126	97	+	.	Parent=comp155125_c0_seq1.mrna1;Target=comp155125_c0_seq1 179 295 -
Chr2	stalkie_big_nohaplotig	exon	3963181	3963357	98	+	.	Parent=comp155125_c0_seq1.mrna1;Target=comp155125_c0_seq1 1 178 -
Chr2	stalkie_big_nohaplotig	CDS	3961775	3961894	.	+	0	Parent=comp155125_c0_seq1.mrna1;Target=comp155125_c0_seq1 1026 1145 .
Chr2	stalkie_big_nohaplotig	CDS	3961951	3962030	.	+	0	Parent=comp155125_c0_seq1.mrna1;Target=comp155125_c0_seq1 946 1025 .
Chr2	stalkie_big_nohaplotig	CDS	3962086	3962199	.	+	1	Parent=comp155125_c0_seq1.mrna1;Target=comp155125_c0_seq1 832 945 .
Chr2	stalkie_big_nohaplotig	CDS	3962412	3962745	.	+	1	Parent=comp155125_c0_seq1.mrna1;Target=comp155125_c0_seq1 498 831 .
Chr2	gffcl	locus	3986276	3989273	.	-	.	ID=RLOC_00014204;geneIDs=FBgn0013732.1.path1;transcripts=FBgn0013732.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3986276	3989273	.	-	.	ID=FBgn0013732.1.mrna1;geneID=FBgn0013732.1.path1;Name=FBgn0013732.1;Dir=sensecoverage=100.0;identity=99.1;matches=2845;mismatches=23;indels=3;unknowns=0;locus=RLOC_00014204
Chr2	stalkie_big_nohaplotig	exon	3986276	3987037	98	-	.	Parent=FBgn0013732.1.mrna1;Target=FBgn0013732.1 2107 2871 +
Chr2	stalkie_big_nohaplotig	exon	3987100	3988654	99	-	.	Parent=FBgn0013732.1.mrna1;Target=FBgn0013732.1 552 2106 +
Chr2	stalkie_big_nohaplotig	exon	3988723	3989273	100	-	.	Parent=FBgn0013732.1.mrna1;Target=FBgn0013732.1 1 551 +
Chr2	stalkie_big_nohaplotig	CDS	3986276	3987037	.	-	0	Parent=FBgn0013732.1.mrna1;Target=FBgn0013732.1 2107 2871 +
Chr2	stalkie_big_nohaplotig	CDS	3987100	3988654	.	-	1	Parent=FBgn0013732.1.mrna1;Target=FBgn0013732.1 552 2106 +
Chr2	stalkie_big_nohaplotig	CDS	3988723	3989273	.	-	0	Parent=FBgn0013732.1.mrna1;Target=FBgn0013732.1 1 551 +
Chr2	gffcl	locus	3990293	3991868	.	+	.	ID=RLOC_00014205;geneIDs=FBgn0034495.1.path1;transcripts=FBgn0034495.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3990293	3991868	.	+	.	ID=FBgn0034495.1.mrna1;geneID=FBgn0034495.1.path1;Name=FBgn0034495.1;Dir=sensecoverage=100.0;identity=99.2;matches=1342;mismatches=11;indels=0;unknowns=0;locus=RLOC_00014205
Chr2	stalkie_big_nohaplotig	exon	3990293	3990414	96	+	.	Parent=FBgn0034495.1.mrna1;Target=FBgn0034495.1 1 122 +
Chr2	stalkie_big_nohaplotig	exon	3990469	3990550	97	+	.	Parent=FBgn0034495.1.mrna1;Target=FBgn0034495.1 123 204 +
Chr2	stalkie_big_nohaplotig	exon	3990610	3991497	99	+	.	Parent=FBgn0034495.1.mrna1;Target=FBgn0034495.1 205 1092 +
Chr2	stalkie_big_nohaplotig	exon	3991552	3991715	99	+	.	Parent=FBgn0034495.1.mrna1;Target=FBgn0034495.1 1093 1256 +
Chr2	stalkie_big_nohaplotig	exon	3991772	3991868	100	+	.	Parent=FBgn0034495.1.mrna1;Target=FBgn0034495.1 1257 1353 +
Chr2	stalkie_big_nohaplotig	CDS	3990293	3990414	.	+	0	Parent=FBgn0034495.1.mrna1;Target=FBgn0034495.1 1 122 +
Chr2	stalkie_big_nohaplotig	CDS	3990469	3990550	.	+	1	Parent=FBgn0034495.1.mrna1;Target=FBgn0034495.1 123 204 +
Chr2	stalkie_big_nohaplotig	CDS	3990610	3991497	.	+	0	Parent=FBgn0034495.1.mrna1;Target=FBgn0034495.1 205 1092 +
Chr2	stalkie_big_nohaplotig	CDS	3991552	3991715	.	+	0	Parent=FBgn0034495.1.mrna1;Target=FBgn0034495.1 1093 1256 +
Chr2	stalkie_big_nohaplotig	CDS	3991772	3991868	.	+	1	Parent=FBgn0034495.1.mrna1;Target=FBgn0034495.1 1257 1353 +
Chr2	gffcl	locus	3992029	3996136	.	-	.	ID=RLOC_00014206;geneIDs=FBgn0032919.2.path1;transcripts=FBgn0032919.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3992029	3996136	.	-	.	ID=FBgn0032919.2.mrna1;geneID=FBgn0032919.2.path1;Name=FBgn0032919.2;Dir=sensecoverage=100.0;identity=99.1;matches=2437;mismatches=17;indels=6;unknowns=0;locus=RLOC_00014206
Chr2	stalkie_big_nohaplotig	exon	3992029	3992176	98	-	.	Parent=FBgn0032919.2.mrna1;Target=FBgn0032919.2 2307 2454 +
Chr2	stalkie_big_nohaplotig	exon	3992251	3992379	100	-	.	Parent=FBgn0032919.2.mrna1;Target=FBgn0032919.2 2178 2306 +
Chr2	stalkie_big_nohaplotig	exon	3993539	3993722	98	-	.	Parent=FBgn0032919.2.mrna1;Target=FBgn0032919.2 1994 2177 +
Chr2	stalkie_big_nohaplotig	exon	3993779	3993914	99	-	.	Parent=FBgn0032919.2.mrna1;Target=FBgn0032919.2 1858 1993 +
Chr2	stalkie_big_nohaplotig	exon	3993982	3994298	99	-	.	Parent=FBgn0032919.2.mrna1;Target=FBgn0032919.2 1541 1857 +
Chr2	stalkie_big_nohaplotig	exon	3994360	3994479	97	-	.	Parent=FBgn0032919.2.mrna1;Target=FBgn0032919.2 1421 1540 +
Chr2	stalkie_big_nohaplotig	exon	3994539	3994862	99	-	.	Parent=FBgn0032919.2.mrna1;Target=FBgn0032919.2 1097 1420 +
Chr2	stalkie_big_nohaplotig	exon	3994919	3995393	99	-	.	Parent=FBgn0032919.2.mrna1;Target=FBgn0032919.2 622 1096 +
Chr2	stalkie_big_nohaplotig	exon	3995455	3995862	97	-	.	Parent=FBgn0032919.2.mrna1;Target=FBgn0032919.2 220 621 +
Chr2	stalkie_big_nohaplotig	exon	3995918	3996136	99	-	.	Parent=FBgn0032919.2.mrna1;Target=FBgn0032919.2 1 219 +
Chr2	stalkie_big_nohaplotig	CDS	3992029	3992176	.	-	1	Parent=FBgn0032919.2.mrna1;Target=FBgn0032919.2 2307 2454 +
Chr2	stalkie_big_nohaplotig	CDS	3992251	3992379	.	-	1	Parent=FBgn0032919.2.mrna1;Target=FBgn0032919.2 2178 2306 +
Chr2	stalkie_big_nohaplotig	CDS	3993539	3993722	.	-	2	Parent=FBgn0032919.2.mrna1;Target=FBgn0032919.2 1994 2177 +
Chr2	stalkie_big_nohaplotig	CDS	3993779	3993914	.	-	0	Parent=FBgn0032919.2.mrna1;Target=FBgn0032919.2 1858 1993 +
Chr2	stalkie_big_nohaplotig	CDS	3993982	3994298	.	-	2	Parent=FBgn0032919.2.mrna1;Target=FBgn0032919.2 1541 1857 +
Chr2	stalkie_big_nohaplotig	CDS	3994360	3994479	.	-	2	Parent=FBgn0032919.2.mrna1;Target=FBgn0032919.2 1421 1540 +
Chr2	stalkie_big_nohaplotig	CDS	3994539	3994862	.	-	2	Parent=FBgn0032919.2.mrna1;Target=FBgn0032919.2 1097 1420 +
Chr2	stalkie_big_nohaplotig	CDS	3994919	3995393	.	-	0	Parent=FBgn0032919.2.mrna1;Target=FBgn0032919.2 622 1096 +
Chr2	stalkie_big_nohaplotig	CDS	3995455	3995862	.	-	0	Parent=FBgn0032919.2.mrna1;Target=FBgn0032919.2 220 621 +
Chr2	stalkie_big_nohaplotig	CDS	3995918	3996136	.	-	0	Parent=FBgn0032919.2.mrna1;Target=FBgn0032919.2 1 219 +
Chr2	gffcl	locus	3997567	4000144	.	-	.	ID=RLOC_00014207;geneIDs=FBgn0034497.1.path1;transcripts=FBgn0034497.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3997567	4000144	.	-	.	ID=FBgn0034497.1.mrna1;geneID=FBgn0034497.1.path1;Name=FBgn0034497.1;Dir=sensecoverage=100.0;identity=99.8;matches=1135;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014207
Chr2	stalkie_big_nohaplotig	exon	3997567	3997733	100	-	.	Parent=FBgn0034497.1.mrna1;Target=FBgn0034497.1 971 1137 +
Chr2	stalkie_big_nohaplotig	exon	3997819	3998006	100	-	.	Parent=FBgn0034497.1.mrna1;Target=FBgn0034497.1 783 970 +
Chr2	stalkie_big_nohaplotig	exon	3998073	3998649	99	-	.	Parent=FBgn0034497.1.mrna1;Target=FBgn0034497.1 206 782 +
Chr2	stalkie_big_nohaplotig	exon	3998712	3998902	99	-	.	Parent=FBgn0034497.1.mrna1;Target=FBgn0034497.1 15 205 +
Chr2	stalkie_big_nohaplotig	exon	4000131	4000144	100	-	.	Parent=FBgn0034497.1.mrna1;Target=FBgn0034497.1 1 14 +
Chr2	stalkie_big_nohaplotig	CDS	3997567	3997733	.	-	2	Parent=FBgn0034497.1.mrna1;Target=FBgn0034497.1 971 1137 +
Chr2	stalkie_big_nohaplotig	CDS	3997819	3998006	.	-	1	Parent=FBgn0034497.1.mrna1;Target=FBgn0034497.1 783 970 +
Chr2	stalkie_big_nohaplotig	CDS	3998073	3998649	.	-	2	Parent=FBgn0034497.1.mrna1;Target=FBgn0034497.1 206 782 +
Chr2	stalkie_big_nohaplotig	CDS	3998712	3998902	.	-	1	Parent=FBgn0034497.1.mrna1;Target=FBgn0034497.1 15 205 +
Chr2	stalkie_big_nohaplotig	CDS	4000131	4000144	.	-	0	Parent=FBgn0034497.1.mrna1;Target=FBgn0034497.1 1 14 +
Chr2	gffcl	locus	3999188	3999761	.	+	.	ID=RLOC_00014208;geneIDs=comp144712_c0_seq1.path1;transcripts=comp144712_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	3999188	3999761	.	+	.	ID=comp144712_c0_seq1.mrna1;geneID=comp144712_c0_seq1.path1;Name=comp144712_c0_seq1;Dir=indeterminatecoverage=99.5;identity=96.5;matches=554;mismatches=7;indels=13;unknowns=0;Target=comp144712_c0_seq1 564 4 .;CDS_Target=comp144712_c0_seq1 518 414 .;locus=RLOC_00014208
Chr2	stalkie_big_nohaplotig	exon	3999188	3999761	96	+	.	Parent=comp144712_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	3999611	3999715	.	+	0	Parent=comp144712_c0_seq1.mrna1
Chr2	gffcl	locus	4001908	4007613	.	-	.	ID=RLOC_00014209;geneIDs=FBgn0034498.1.path1;transcripts=FBgn0034498.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4001908	4007613	.	-	.	ID=FBgn0034498.1.mrna1;geneID=FBgn0034498.1.path1;Name=FBgn0034498.1;Dir=sensecoverage=100.0;identity=99.6;matches=4606;mismatches=20;indels=0;unknowns=0;locus=RLOC_00014209
Chr2	stalkie_big_nohaplotig	exon	4001908	4002689	99	-	.	Parent=FBgn0034498.1.mrna1;Target=FBgn0034498.1 3845 4626 +
Chr2	stalkie_big_nohaplotig	exon	4002747	4003628	99	-	.	Parent=FBgn0034498.1.mrna1;Target=FBgn0034498.1 2963 3844 +
Chr2	stalkie_big_nohaplotig	exon	4003825	4004235	99	-	.	Parent=FBgn0034498.1.mrna1;Target=FBgn0034498.1 2552 2962 +
Chr2	stalkie_big_nohaplotig	exon	4004299	4004617	97	-	.	Parent=FBgn0034498.1.mrna1;Target=FBgn0034498.1 2233 2551 +
Chr2	stalkie_big_nohaplotig	exon	4005119	4005459	99	-	.	Parent=FBgn0034498.1.mrna1;Target=FBgn0034498.1 1892 2232 +
Chr2	stalkie_big_nohaplotig	exon	4005520	4005780	98	-	.	Parent=FBgn0034498.1.mrna1;Target=FBgn0034498.1 1631 1891 +
Chr2	stalkie_big_nohaplotig	exon	4005840	4006250	100	-	.	Parent=FBgn0034498.1.mrna1;Target=FBgn0034498.1 1220 1630 +
Chr2	stalkie_big_nohaplotig	exon	4006332	4007121	99	-	.	Parent=FBgn0034498.1.mrna1;Target=FBgn0034498.1 430 1219 +
Chr2	stalkie_big_nohaplotig	exon	4007185	4007613	99	-	.	Parent=FBgn0034498.1.mrna1;Target=FBgn0034498.1 1 429 +
Chr2	stalkie_big_nohaplotig	CDS	4001908	4002689	.	-	2	Parent=FBgn0034498.1.mrna1;Target=FBgn0034498.1 3845 4626 +
Chr2	stalkie_big_nohaplotig	CDS	4002747	4003628	.	-	2	Parent=FBgn0034498.1.mrna1;Target=FBgn0034498.1 2963 3844 +
Chr2	stalkie_big_nohaplotig	CDS	4003825	4004235	.	-	2	Parent=FBgn0034498.1.mrna1;Target=FBgn0034498.1 2552 2962 +
Chr2	stalkie_big_nohaplotig	CDS	4004299	4004617	.	-	0	Parent=FBgn0034498.1.mrna1;Target=FBgn0034498.1 2233 2551 +
Chr2	stalkie_big_nohaplotig	CDS	4005119	4005459	.	-	2	Parent=FBgn0034498.1.mrna1;Target=FBgn0034498.1 1892 2232 +
Chr2	stalkie_big_nohaplotig	CDS	4005520	4005780	.	-	2	Parent=FBgn0034498.1.mrna1;Target=FBgn0034498.1 1631 1891 +
Chr2	stalkie_big_nohaplotig	CDS	4005840	4006250	.	-	2	Parent=FBgn0034498.1.mrna1;Target=FBgn0034498.1 1220 1630 +
Chr2	stalkie_big_nohaplotig	CDS	4006332	4007121	.	-	0	Parent=FBgn0034498.1.mrna1;Target=FBgn0034498.1 430 1219 +
Chr2	stalkie_big_nohaplotig	CDS	4007185	4007613	.	-	0	Parent=FBgn0034498.1.mrna1;Target=FBgn0034498.1 1 429 +
Chr2	gffcl	locus	4009812	4011058	.	-	.	ID=RLOC_00014210;geneIDs=comp159218_c0_seq1.path1;transcripts=comp159218_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4009812	4011058	.	-	.	ID=comp159218_c0_seq1.mrna1;geneID=comp159218_c0_seq1.path1;Name=comp159218_c0_seq1;Dir=sensecoverage=99.8;identity=98.1;matches=1119;mismatches=20;indels=2;unknowns=0;locus=RLOC_00014210
Chr2	stalkie_big_nohaplotig	exon	4009812	4010788	98	-	.	Parent=comp159218_c0_seq1.mrna1;Target=comp159218_c0_seq1 163 1141 +
Chr2	stalkie_big_nohaplotig	exon	4010897	4011058	97	-	.	Parent=comp159218_c0_seq1.mrna1;Target=comp159218_c0_seq1 1 162 +
Chr2	stalkie_big_nohaplotig	CDS	4009913	4010788	.	-	0	Parent=comp159218_c0_seq1.mrna1;Target=comp159218_c0_seq1 163 1038 +
Chr2	stalkie_big_nohaplotig	CDS	4010897	4010911	.	-	0	Parent=comp159218_c0_seq1.mrna1;Target=comp159218_c0_seq1 148 162 +
Chr2	gffcl	locus	4016739	4023602	.	-	.	ID=RLOC_00014211;geneIDs=FBgn0034499.1.path1;transcripts=FBgn0034499.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4016739	4023602	.	-	.	ID=FBgn0034499.1.mrna1;geneID=FBgn0034499.1.path1;Name=FBgn0034499.1;Dir=sensecoverage=100.0;identity=99.5;matches=651;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014211
Chr2	stalkie_big_nohaplotig	exon	4016739	4017377	99	-	.	Parent=FBgn0034499.1.mrna1;Target=FBgn0034499.1 16 654 +
Chr2	stalkie_big_nohaplotig	exon	4023588	4023602	100	-	.	Parent=FBgn0034499.1.mrna1;Target=FBgn0034499.1 1 15 +
Chr2	stalkie_big_nohaplotig	CDS	4016739	4017377	.	-	0	Parent=FBgn0034499.1.mrna1;Target=FBgn0034499.1 16 654 +
Chr2	stalkie_big_nohaplotig	CDS	4023588	4023602	.	-	0	Parent=FBgn0034499.1.mrna1;Target=FBgn0034499.1 1 15 +
Chr2	gffcl	locus	4032579	4033549	.	+	.	ID=RLOC_00014212;geneIDs=comp153496_c0_seq1.path1;transcripts=comp153496_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4032579	4033549	.	+	.	ID=comp153496_c0_seq1.mrna1;geneID=comp153496_c0_seq1.path1;Name=comp153496_c0_seq1;Dir=indeterminatecoverage=98.6;identity=93.0;matches=909;mismatches=62;indels=6;unknowns=0;Target=comp153496_c0_seq1 989 13 .;CDS_Target=comp153496_c0_seq1 500 15 .;locus=RLOC_00014212
Chr2	stalkie_big_nohaplotig	exon	4032579	4033549	93	+	.	Parent=comp153496_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4032581	4033066	.	+	0	Parent=comp153496_c0_seq1.mrna1
Chr2	gffcl	locus	4038038	4039090	.	+	.	ID=RLOC_00014213;geneIDs=comp148940_c1_seq1.path1;transcripts=comp148940_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4038038	4039090	.	+	.	ID=comp148940_c1_seq1.mrna1;geneID=comp148940_c1_seq1.path1;Name=comp148940_c1_seq1;Dir=antisensecoverage=75.2;identity=95.8;matches=829;mismatches=29;indels=7;unknowns=0;locus=RLOC_00014213
Chr2	stalkie_big_nohaplotig	exon	4038038	4038273	97	+	.	Parent=comp148940_c1_seq1.mrna1;Target=comp148940_c1_seq1 631 865 -
Chr2	stalkie_big_nohaplotig	exon	4038343	4038460	99	+	.	Parent=comp148940_c1_seq1.mrna1;Target=comp148940_c1_seq1 513 630 -
Chr2	stalkie_big_nohaplotig	exon	4038524	4038642	100	+	.	Parent=comp148940_c1_seq1.mrna1;Target=comp148940_c1_seq1 394 512 -
Chr2	stalkie_big_nohaplotig	exon	4038705	4039090	92	+	.	Parent=comp148940_c1_seq1.mrna1;Target=comp148940_c1_seq1 2 393 -
Chr2	stalkie_big_nohaplotig	CDS	4038246	4038273	.	+	0	Parent=comp148940_c1_seq1.mrna1;Target=comp148940_c1_seq1 631 658 .
Chr2	stalkie_big_nohaplotig	CDS	4038343	4038460	.	+	2	Parent=comp148940_c1_seq1.mrna1;Target=comp148940_c1_seq1 513 630 .
Chr2	stalkie_big_nohaplotig	CDS	4038524	4038642	.	+	1	Parent=comp148940_c1_seq1.mrna1;Target=comp148940_c1_seq1 394 512 .
Chr2	stalkie_big_nohaplotig	CDS	4038705	4039090	.	+	2	Parent=comp148940_c1_seq1.mrna1;Target=comp148940_c1_seq1 2 393 .
Chr2	gffcl	locus	4075298	4078566	.	-	.	ID=RLOC_00014214;geneIDs=FBgn0034500.1.path1;transcripts=FBgn0034500.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4075298	4078566	.	-	.	ID=FBgn0034500.1.mrna1;geneID=FBgn0034500.1.path1;Name=FBgn0034500.1;Dir=sensecoverage=100.0;identity=99.4;matches=1076;mismatches=7;indels=0;unknowns=0;locus=RLOC_00014214
Chr2	stalkie_big_nohaplotig	exon	4075298	4075679	99	-	.	Parent=FBgn0034500.1.mrna1;Target=FBgn0034500.1 702 1083 +
Chr2	stalkie_big_nohaplotig	exon	4075739	4075946	98	-	.	Parent=FBgn0034500.1.mrna1;Target=FBgn0034500.1 494 701 +
Chr2	stalkie_big_nohaplotig	exon	4076565	4076738	100	-	.	Parent=FBgn0034500.1.mrna1;Target=FBgn0034500.1 320 493 +
Chr2	stalkie_big_nohaplotig	exon	4078176	4078283	100	-	.	Parent=FBgn0034500.1.mrna1;Target=FBgn0034500.1 212 319 +
Chr2	stalkie_big_nohaplotig	exon	4078356	4078566	99	-	.	Parent=FBgn0034500.1.mrna1;Target=FBgn0034500.1 1 211 +
Chr2	stalkie_big_nohaplotig	CDS	4075298	4075679	.	-	1	Parent=FBgn0034500.1.mrna1;Target=FBgn0034500.1 702 1083 +
Chr2	stalkie_big_nohaplotig	CDS	4075739	4075946	.	-	2	Parent=FBgn0034500.1.mrna1;Target=FBgn0034500.1 494 701 +
Chr2	stalkie_big_nohaplotig	CDS	4076565	4076738	.	-	2	Parent=FBgn0034500.1.mrna1;Target=FBgn0034500.1 320 493 +
Chr2	stalkie_big_nohaplotig	CDS	4078176	4078283	.	-	2	Parent=FBgn0034500.1.mrna1;Target=FBgn0034500.1 212 319 +
Chr2	stalkie_big_nohaplotig	CDS	4078356	4078566	.	-	0	Parent=FBgn0034500.1.mrna1;Target=FBgn0034500.1 1 211 +
Chr2	gffcl	locus	4087343	4091286	.	+	.	ID=RLOC_00014215;geneIDs=FBgn0029147.1.path1;transcripts=FBgn0029147.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4087343	4091286	.	+	.	ID=FBgn0029147.1.mrna1;geneID=FBgn0029147.1.path1;Name=FBgn0029147.1;Dir=sensecoverage=100.0;identity=99.4;matches=1744;mismatches=11;indels=0;unknowns=0;locus=RLOC_00014215
Chr2	stalkie_big_nohaplotig	exon	4087343	4087649	99	+	.	Parent=FBgn0029147.1.mrna1;Target=FBgn0029147.1 1 307 +
Chr2	stalkie_big_nohaplotig	exon	4087742	4087873	99	+	.	Parent=FBgn0029147.1.mrna1;Target=FBgn0029147.1 308 439 +
Chr2	stalkie_big_nohaplotig	exon	4087937	4088089	100	+	.	Parent=FBgn0029147.1.mrna1;Target=FBgn0029147.1 440 592 +
Chr2	stalkie_big_nohaplotig	exon	4088205	4088392	99	+	.	Parent=FBgn0029147.1.mrna1;Target=FBgn0029147.1 593 780 +
Chr2	stalkie_big_nohaplotig	exon	4088456	4088562	100	+	.	Parent=FBgn0029147.1.mrna1;Target=FBgn0029147.1 781 887 +
Chr2	stalkie_big_nohaplotig	exon	4088619	4089064	99	+	.	Parent=FBgn0029147.1.mrna1;Target=FBgn0029147.1 888 1333 +
Chr2	stalkie_big_nohaplotig	exon	4089141	4089281	100	+	.	Parent=FBgn0029147.1.mrna1;Target=FBgn0029147.1 1334 1474 +
Chr2	stalkie_big_nohaplotig	exon	4089339	4089505	99	+	.	Parent=FBgn0029147.1.mrna1;Target=FBgn0029147.1 1475 1641 +
Chr2	stalkie_big_nohaplotig	exon	4091173	4091286	99	+	.	Parent=FBgn0029147.1.mrna1;Target=FBgn0029147.1 1642 1755 +
Chr2	stalkie_big_nohaplotig	CDS	4087343	4087649	.	+	0	Parent=FBgn0029147.1.mrna1;Target=FBgn0029147.1 1 307 +
Chr2	stalkie_big_nohaplotig	CDS	4087742	4087873	.	+	2	Parent=FBgn0029147.1.mrna1;Target=FBgn0029147.1 308 439 +
Chr2	stalkie_big_nohaplotig	CDS	4087937	4088089	.	+	2	Parent=FBgn0029147.1.mrna1;Target=FBgn0029147.1 440 592 +
Chr2	stalkie_big_nohaplotig	CDS	4088205	4088392	.	+	2	Parent=FBgn0029147.1.mrna1;Target=FBgn0029147.1 593 780 +
Chr2	stalkie_big_nohaplotig	CDS	4088456	4088562	.	+	0	Parent=FBgn0029147.1.mrna1;Target=FBgn0029147.1 781 887 +
Chr2	stalkie_big_nohaplotig	CDS	4088619	4089064	.	+	1	Parent=FBgn0029147.1.mrna1;Target=FBgn0029147.1 888 1333 +
Chr2	stalkie_big_nohaplotig	CDS	4089141	4089281	.	+	2	Parent=FBgn0029147.1.mrna1;Target=FBgn0029147.1 1334 1474 +
Chr2	stalkie_big_nohaplotig	CDS	4089339	4089505	.	+	2	Parent=FBgn0029147.1.mrna1;Target=FBgn0029147.1 1475 1641 +
Chr2	stalkie_big_nohaplotig	CDS	4091173	4091286	.	+	0	Parent=FBgn0029147.1.mrna1;Target=FBgn0029147.1 1642 1755 +
Chr2	gffcl	locus	4092389	4093475	.	-	.	ID=RLOC_00014216;geneIDs=comp159589_c2_seq1.path1;transcripts=comp159589_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4092389	4093475	.	-	.	ID=comp159589_c2_seq1.mrna1;geneID=comp159589_c2_seq1.path1;Name=comp159589_c2_seq1;Dir=indeterminatecoverage=92.2;identity=97.9;matches=1072;mismatches=15;indels=8;unknowns=0;Target=comp159589_c2_seq1 1156 62 .;CDS_Target=comp159589_c2_seq1 833 768 .;locus=RLOC_00014216
Chr2	stalkie_big_nohaplotig	exon	4092389	4093475	97	-	.	Parent=comp159589_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4092712	4092769	.	-	0	Parent=comp159589_c2_seq1.mrna1
Chr2	gffcl	locus	4132215	4132755	.	+	.	ID=RLOC_00014217;geneIDs=comp149909_c0_seq1.path1;transcripts=comp149909_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4132215	4132755	.	+	.	ID=comp149909_c0_seq1.mrna1;geneID=comp149909_c0_seq1.path1;Name=comp149909_c0_seq1;Dir=indeterminatecoverage=84.1;identity=97.8;matches=531;mismatches=10;indels=2;unknowns=0;Target=comp149909_c0_seq1 601 59 .;CDS_Target=comp149909_c0_seq1 179 60 .;locus=RLOC_00014217
Chr2	stalkie_big_nohaplotig	exon	4132215	4132755	97	+	.	Parent=comp149909_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4132216	4132335	.	+	0	Parent=comp149909_c0_seq1.mrna1
Chr2	gffcl	locus	4189884	4190730	.	-	.	ID=RLOC_00014218;geneIDs=comp158866_c0_seq1.path1;transcripts=comp158866_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4189884	4190730	.	-	.	ID=comp158866_c0_seq1.mrna1;geneID=comp158866_c0_seq1.path1;Name=comp158866_c0_seq1;Dir=indeterminatecoverage=99.9;identity=95.9;matches=812;mismatches=18;indels=17;unknowns=0;Target=comp158866_c0_seq1 830 1 .;CDS_Target=comp158866_c0_seq1 392 243 .;locus=RLOC_00014218
Chr2	stalkie_big_nohaplotig	exon	4189884	4190730	95	-	.	Parent=comp158866_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4190326	4190488	.	-	0	Parent=comp158866_c0_seq1.mrna1
Chr2	gffcl	locus	4190763	4191428	.	+	.	ID=RLOC_00014219;geneIDs=comp89999_c0_seq1.path1;transcripts=comp89999_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4190763	4191428	.	+	.	ID=comp89999_c0_seq1.mrna1;geneID=comp89999_c0_seq1.path1;Name=comp89999_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=664;mismatches=2;indels=0;unknowns=0;Target=comp89999_c0_seq1 666 1 .;CDS_Target=comp89999_c0_seq1 633 505 .;locus=RLOC_00014219
Chr2	stalkie_big_nohaplotig	exon	4190763	4191428	99	+	.	Parent=comp89999_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4191267	4191395	.	+	0	Parent=comp89999_c0_seq1.mrna1
Chr2	gffcl	locus	4195811	4196808	.	-	.	ID=RLOC_00014220;geneIDs=FBgn0032030.5.path1;transcripts=FBgn0032030.5.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4195811	4196808	.	-	.	ID=FBgn0032030.5.mrna1;geneID=FBgn0032030.5.path1;Name=FBgn0032030.5;Dir=indeterminatecoverage=99.9;identity=99.7;matches=995;mismatches=3;indels=0;unknowns=0;Target=FBgn0032030.5 998 1 .;CDS_Target=FBgn0032030.5 996 1 .;locus=RLOC_00014220
Chr2	stalkie_big_nohaplotig	exon	4195811	4196808	99	-	.	Parent=FBgn0032030.5.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4195813	4196808	.	-	0	Parent=FBgn0032030.5.mrna1
Chr2	gffcl	locus	4199007	4201478	.	+	.	ID=RLOC_00014221;geneIDs=FBgn0034703.1.path1;transcripts=FBgn0034703.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4199007	4201478	.	+	.	ID=FBgn0034703.1.mrna1;geneID=FBgn0034703.1.path1;Name=FBgn0034703.1;Dir=sensecoverage=100.0;identity=99.5;matches=1570;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014221
Chr2	stalkie_big_nohaplotig	exon	4199007	4199401	98	+	.	Parent=FBgn0034703.1.mrna1;Target=FBgn0034703.1 1 395 +
Chr2	stalkie_big_nohaplotig	exon	4199469	4199560	98	+	.	Parent=FBgn0034703.1.mrna1;Target=FBgn0034703.1 396 487 +
Chr2	stalkie_big_nohaplotig	exon	4199619	4199953	99	+	.	Parent=FBgn0034703.1.mrna1;Target=FBgn0034703.1 488 822 +
Chr2	stalkie_big_nohaplotig	exon	4200044	4200194	99	+	.	Parent=FBgn0034703.1.mrna1;Target=FBgn0034703.1 823 973 +
Chr2	stalkie_big_nohaplotig	exon	4200254	4200401	100	+	.	Parent=FBgn0034703.1.mrna1;Target=FBgn0034703.1 974 1121 +
Chr2	stalkie_big_nohaplotig	exon	4200467	4200676	100	+	.	Parent=FBgn0034703.1.mrna1;Target=FBgn0034703.1 1122 1331 +
Chr2	stalkie_big_nohaplotig	exon	4201024	4201169	100	+	.	Parent=FBgn0034703.1.mrna1;Target=FBgn0034703.1 1332 1477 +
Chr2	stalkie_big_nohaplotig	exon	4201378	4201478	100	+	.	Parent=FBgn0034703.1.mrna1;Target=FBgn0034703.1 1478 1578 +
Chr2	stalkie_big_nohaplotig	CDS	4199007	4199401	.	+	0	Parent=FBgn0034703.1.mrna1;Target=FBgn0034703.1 1 395 +
Chr2	stalkie_big_nohaplotig	CDS	4199469	4199560	.	+	1	Parent=FBgn0034703.1.mrna1;Target=FBgn0034703.1 396 487 +
Chr2	stalkie_big_nohaplotig	CDS	4199619	4199953	.	+	2	Parent=FBgn0034703.1.mrna1;Target=FBgn0034703.1 488 822 +
Chr2	stalkie_big_nohaplotig	CDS	4200044	4200194	.	+	0	Parent=FBgn0034703.1.mrna1;Target=FBgn0034703.1 823 973 +
Chr2	stalkie_big_nohaplotig	CDS	4200254	4200401	.	+	2	Parent=FBgn0034703.1.mrna1;Target=FBgn0034703.1 974 1121 +
Chr2	stalkie_big_nohaplotig	CDS	4200467	4200676	.	+	1	Parent=FBgn0034703.1.mrna1;Target=FBgn0034703.1 1122 1331 +
Chr2	stalkie_big_nohaplotig	CDS	4201024	4201169	.	+	1	Parent=FBgn0034703.1.mrna1;Target=FBgn0034703.1 1332 1477 +
Chr2	stalkie_big_nohaplotig	CDS	4201378	4201478	.	+	2	Parent=FBgn0034703.1.mrna1;Target=FBgn0034703.1 1478 1578 +
Chr2	gffcl	locus	4221408	4222159	.	+	.	ID=RLOC_00014223;geneIDs=ORF3240.path1;transcripts=ORF3240.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4221408	4222159	.	+	.	ID=ORF3240.mrna1;geneID=ORF3240.path1;Name=ORF3240;Dir=indeterminatecoverage=100.0;identity=98.9;matches=745;mismatches=7;indels=1;unknowns=0;Target=ORF3240 753 1 .;CDS_Target=ORF3240 98 3 .;locus=RLOC_00014223
Chr2	stalkie_big_nohaplotig	exon	4221408	4222159	98	+	.	Parent=ORF3240.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4221410	4221504	.	+	0	Parent=ORF3240.mrna1
Chr2	gffcl	locus	4271787	4278562	.	+	.	ID=RLOC_00014224;geneIDs=FBgn0000662.1.path1;transcripts=FBgn0000662.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4271787	4278562	.	+	.	ID=FBgn0000662.1.mrna1;geneID=FBgn0000662.1.path1;Name=FBgn0000662.1;Dir=sensecoverage=100.0;identity=99.7;matches=1077;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014224
Chr2	stalkie_big_nohaplotig	exon	4271787	4272099	100	+	.	Parent=FBgn0000662.1.mrna1;Target=FBgn0000662.1 1 313 +
Chr2	stalkie_big_nohaplotig	exon	4276856	4276980	100	+	.	Parent=FBgn0000662.1.mrna1;Target=FBgn0000662.1 314 438 +
Chr2	stalkie_big_nohaplotig	exon	4277783	4278007	100	+	.	Parent=FBgn0000662.1.mrna1;Target=FBgn0000662.1 439 663 +
Chr2	stalkie_big_nohaplotig	exon	4278081	4278189	100	+	.	Parent=FBgn0000662.1.mrna1;Target=FBgn0000662.1 664 772 +
Chr2	stalkie_big_nohaplotig	exon	4278255	4278562	99	+	.	Parent=FBgn0000662.1.mrna1;Target=FBgn0000662.1 773 1080 +
Chr2	stalkie_big_nohaplotig	CDS	4271787	4272099	.	+	0	Parent=FBgn0000662.1.mrna1;Target=FBgn0000662.1 1 313 +
Chr2	stalkie_big_nohaplotig	CDS	4276856	4276980	.	+	2	Parent=FBgn0000662.1.mrna1;Target=FBgn0000662.1 314 438 +
Chr2	stalkie_big_nohaplotig	CDS	4277783	4278007	.	+	0	Parent=FBgn0000662.1.mrna1;Target=FBgn0000662.1 439 663 +
Chr2	stalkie_big_nohaplotig	CDS	4278081	4278189	.	+	0	Parent=FBgn0000662.1.mrna1;Target=FBgn0000662.1 664 772 +
Chr2	stalkie_big_nohaplotig	CDS	4278255	4278562	.	+	2	Parent=FBgn0000662.1.mrna1;Target=FBgn0000662.1 773 1080 +
Chr2	gffcl	locus	4272969	4273634	.	-	.	ID=RLOC_00014225;geneIDs=comp89999_c0_seq1.path2;transcripts=comp89999_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	4272969	4273634	.	-	.	ID=comp89999_c0_seq1.mrna2;geneID=comp89999_c0_seq1.path2;Name=comp89999_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=664;mismatches=2;indels=0;unknowns=0;Target=comp89999_c0_seq1 666 1 .;CDS_Target=comp89999_c0_seq1 633 505 .;locus=RLOC_00014225
Chr2	stalkie_big_nohaplotig	exon	4272969	4273634	99	-	.	Parent=comp89999_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	4273002	4273130	.	-	0	Parent=comp89999_c0_seq1.mrna2
Chr2	gffcl	locus	4273667	4274513	.	+	.	ID=RLOC_00014226;geneIDs=comp158866_c0_seq1.path2;transcripts=comp158866_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	4273667	4274513	.	+	.	ID=comp158866_c0_seq1.mrna2;geneID=comp158866_c0_seq1.path2;Name=comp158866_c0_seq1;Dir=indeterminatecoverage=99.9;identity=95.9;matches=812;mismatches=18;indels=17;unknowns=0;Target=comp158866_c0_seq1 830 1 .;CDS_Target=comp158866_c0_seq1 392 243 .;locus=RLOC_00014226
Chr2	stalkie_big_nohaplotig	exon	4273667	4274513	95	+	.	Parent=comp158866_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	4273909	4274071	.	+	0	Parent=comp158866_c0_seq1.mrna2
Chr2	gffcl	locus	4284142	4319556	.	-	.	ID=RLOC_00014227;geneIDs=FBgn0033869.1.path1;transcripts=FBgn0033869.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4284142	4319556	.	-	.	ID=FBgn0033869.1.mrna1;geneID=FBgn0033869.1.path1;Name=FBgn0033869.1;Dir=sensecoverage=100.0;identity=99.6;matches=538;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014227
Chr2	stalkie_big_nohaplotig	exon	4284142	4284399	100	-	.	Parent=FBgn0033869.1.mrna1;Target=FBgn0033869.1 283 540 +
Chr2	stalkie_big_nohaplotig	exon	4284996	4285094	98	-	.	Parent=FBgn0033869.1.mrna1;Target=FBgn0033869.1 184 282 +
Chr2	stalkie_big_nohaplotig	exon	4287253	4287366	100	-	.	Parent=FBgn0033869.1.mrna1;Target=FBgn0033869.1 70 183 +
Chr2	stalkie_big_nohaplotig	exon	4319488	4319556	98	-	.	Parent=FBgn0033869.1.mrna1;Target=FBgn0033869.1 1 69 +
Chr2	stalkie_big_nohaplotig	CDS	4284142	4284399	.	-	0	Parent=FBgn0033869.1.mrna1;Target=FBgn0033869.1 283 540 +
Chr2	stalkie_big_nohaplotig	CDS	4284996	4285094	.	-	0	Parent=FBgn0033869.1.mrna1;Target=FBgn0033869.1 184 282 +
Chr2	stalkie_big_nohaplotig	CDS	4287253	4287366	.	-	0	Parent=FBgn0033869.1.mrna1;Target=FBgn0033869.1 70 183 +
Chr2	stalkie_big_nohaplotig	CDS	4319488	4319556	.	-	0	Parent=FBgn0033869.1.mrna1;Target=FBgn0033869.1 1 69 +
Chr2	gffcl	locus	4322568	4324044	.	-	.	ID=RLOC_00014228;geneIDs=FBgn0017457.2.path1;transcripts=FBgn0017457.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4322568	4324044	.	-	.	ID=FBgn0017457.2.mrna1;geneID=FBgn0017457.2.path1;Name=FBgn0017457.2;Dir=sensecoverage=100.0;identity=99.1;matches=1073;mismatches=10;indels=0;unknowns=0;locus=RLOC_00014228
Chr2	stalkie_big_nohaplotig	exon	4322568	4323090	98	-	.	Parent=FBgn0017457.2.mrna1;Target=FBgn0017457.2 561 1083 +
Chr2	stalkie_big_nohaplotig	exon	4323165	4323674	99	-	.	Parent=FBgn0017457.2.mrna1;Target=FBgn0017457.2 51 560 +
Chr2	stalkie_big_nohaplotig	exon	4323995	4324044	100	-	.	Parent=FBgn0017457.2.mrna1;Target=FBgn0017457.2 1 50 +
Chr2	stalkie_big_nohaplotig	CDS	4322568	4323090	.	-	1	Parent=FBgn0017457.2.mrna1;Target=FBgn0017457.2 561 1083 +
Chr2	stalkie_big_nohaplotig	CDS	4323165	4323674	.	-	1	Parent=FBgn0017457.2.mrna1;Target=FBgn0017457.2 51 560 +
Chr2	stalkie_big_nohaplotig	CDS	4323995	4324044	.	-	0	Parent=FBgn0017457.2.mrna1;Target=FBgn0017457.2 1 50 +
Chr2	gffcl	locus	4335345	4350003	.	+	.	ID=RLOC_00014229;geneIDs=comp151920_c4_seq1.path1;transcripts=comp151920_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4335345	4350003	.	+	.	ID=comp151920_c4_seq1.mrna1;geneID=comp151920_c4_seq1.path1;Name=comp151920_c4_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=967;mismatches=5;indels=0;unknowns=0;Target=comp151920_c4_seq1 2 187 .;locus=RLOC_00014229
Chr2	stalkie_big_nohaplotig	exon	4335345	4335557	98	+	.	Parent=comp151920_c4_seq1.mrna1;Target=comp151920_c4_seq1 760 972 -
Chr2	stalkie_big_nohaplotig	exon	4335627	4335963	99	+	.	Parent=comp151920_c4_seq1.mrna1;Target=comp151920_c4_seq1 423 759 -
Chr2	stalkie_big_nohaplotig	exon	4336218	4336309	100	+	.	Parent=comp151920_c4_seq1.mrna1;Target=comp151920_c4_seq1 331 422 -
Chr2	stalkie_big_nohaplotig	exon	4349674	4350003	100	+	.	Parent=comp151920_c4_seq1.mrna1;Target=comp151920_c4_seq1 1 330 -
Chr2	stalkie_big_nohaplotig	CDS	4349817	4350002	.	+	0	Parent=comp151920_c4_seq1.mrna1
Chr2	gffcl	locus	4345237	4346038	.	-	.	ID=RLOC_00014230;geneIDs=comp156215_c0_seq1.path1;transcripts=comp156215_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4345237	4346038	.	-	.	ID=comp156215_c0_seq1.mrna1;geneID=comp156215_c0_seq1.path1;Name=comp156215_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=787;mismatches=9;indels=12;unknowns=0;Target=comp156215_c0_seq1 802 1 .;CDS_Target=comp156215_c0_seq1 437 282 .;locus=RLOC_00014230
Chr2	stalkie_big_nohaplotig	exon	4345237	4346038	97	-	.	Parent=comp156215_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4345602	4345757	.	-	0	Parent=comp156215_c0_seq1.mrna1
Chr2	gffcl	locus	4346354	4346790	.	-	.	ID=RLOC_00014231;geneIDs=comp142556_c0_seq1.path1;transcripts=comp142556_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4346354	4346790	.	-	.	ID=comp142556_c0_seq1.mrna1;geneID=comp142556_c0_seq1.path1;Name=comp142556_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=426;mismatches=11;indels=0;unknowns=0;Target=comp142556_c0_seq1 437 1 .;CDS_Target=comp142556_c0_seq1 352 278 .;locus=RLOC_00014231
Chr2	stalkie_big_nohaplotig	exon	4346354	4346790	97	-	.	Parent=comp142556_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4346439	4346513	.	-	0	Parent=comp142556_c0_seq1.mrna1
Chr2	gffcl	locus	4350596	4351285	.	+	.	ID=RLOC_00014233;geneIDs=comp58665_c0_seq1.path1;transcripts=comp58665_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4350596	4351285	.	+	.	ID=comp58665_c0_seq1.mrna1;geneID=comp58665_c0_seq1.path1;Name=comp58665_c0_seq1;Dir=indeterminatecoverage=97.0;identity=100.0;matches=690;mismatches=0;indels=0;unknowns=0;Target=comp58665_c0_seq1 708 19 .;CDS_Target=comp58665_c0_seq1 708 598 .;locus=RLOC_00014233
Chr2	stalkie_big_nohaplotig	exon	4350596	4351285	100	+	.	Parent=comp58665_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4351175	4351285	.	+	0	Parent=comp58665_c0_seq1.mrna1
Chr2	gffcl	locus	4351820	4353010	.	+	.	ID=RLOC_00014234;geneIDs=ORF3230.path1;transcripts=ORF3230.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4351820	4353010	.	+	.	ID=ORF3230.mrna1;geneID=ORF3230.path1;Name=ORF3230;Dir=sensecoverage=100.0;identity=99.9;matches=752;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014234
Chr2	stalkie_big_nohaplotig	exon	4351820	4351945	100	+	.	Parent=ORF3230.mrna1;Target=ORF3230 1 126 +
Chr2	stalkie_big_nohaplotig	exon	4352266	4352381	100	+	.	Parent=ORF3230.mrna1;Target=ORF3230 127 242 +
Chr2	stalkie_big_nohaplotig	exon	4352440	4352501	100	+	.	Parent=ORF3230.mrna1;Target=ORF3230 243 304 +
Chr2	stalkie_big_nohaplotig	exon	4352562	4353010	99	+	.	Parent=ORF3230.mrna1;Target=ORF3230 305 753 +
Chr2	stalkie_big_nohaplotig	CDS	4351820	4351945	.	+	0	Parent=ORF3230.mrna1;Target=ORF3230 1 126 +
Chr2	stalkie_big_nohaplotig	CDS	4352266	4352381	.	+	0	Parent=ORF3230.mrna1;Target=ORF3230 127 242 +
Chr2	stalkie_big_nohaplotig	CDS	4352440	4352501	.	+	1	Parent=ORF3230.mrna1;Target=ORF3230 243 304 +
Chr2	stalkie_big_nohaplotig	CDS	4352562	4353010	.	+	2	Parent=ORF3230.mrna1;Target=ORF3230 305 753 +
Chr2	gffcl	locus	4355047	4355859	.	-	.	ID=RLOC_00014235;geneIDs=comp145555_c0_seq1.path1;transcripts=comp145555_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4355047	4355859	.	-	.	ID=comp145555_c0_seq1.mrna1;geneID=comp145555_c0_seq1.path1;Name=comp145555_c0_seq1;Dir=sensecoverage=98.7;identity=99.7;matches=681;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014235
Chr2	stalkie_big_nohaplotig	exon	4355047	4355553	99	-	.	Parent=comp145555_c0_seq1.mrna1;Target=comp145555_c0_seq1 178 684 +
Chr2	stalkie_big_nohaplotig	exon	4355684	4355859	100	-	.	Parent=comp145555_c0_seq1.mrna1;Target=comp145555_c0_seq1 2 177 +
Chr2	stalkie_big_nohaplotig	CDS	4355149	4355553	.	-	0	Parent=comp145555_c0_seq1.mrna1;Target=comp145555_c0_seq1 178 582 +
Chr2	stalkie_big_nohaplotig	CDS	4355684	4355746	.	-	0	Parent=comp145555_c0_seq1.mrna1;Target=comp145555_c0_seq1 115 177 +
Chr2	gffcl	locus	4366792	4367499	.	+	.	ID=RLOC_00014236;geneIDs=comp153394_c0_seq1.path1;transcripts=comp153394_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4366792	4367499	.	+	.	ID=comp153394_c0_seq1.mrna1;geneID=comp153394_c0_seq1.path1;Name=comp153394_c0_seq1;Dir=sensecoverage=99.8;identity=98.4;matches=487;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014236
Chr2	stalkie_big_nohaplotig	exon	4366792	4366944	96	+	.	Parent=comp153394_c0_seq1.mrna1;Target=comp153394_c0_seq1 1 153 +
Chr2	stalkie_big_nohaplotig	exon	4367158	4367499	99	+	.	Parent=comp153394_c0_seq1.mrna1;Target=comp153394_c0_seq1 154 495 +
Chr2	stalkie_big_nohaplotig	CDS	4366900	4366944	.	+	0	Parent=comp153394_c0_seq1.mrna1;Target=comp153394_c0_seq1 109 153 +
Chr2	stalkie_big_nohaplotig	CDS	4367158	4367352	.	+	0	Parent=comp153394_c0_seq1.mrna1;Target=comp153394_c0_seq1 154 348 +
Chr2	gffcl	locus	4371011	4372262	.	+	.	ID=RLOC_00014237;geneIDs=FBgn0027378.3.path1;transcripts=FBgn0027378.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4371011	4372262	.	+	.	ID=FBgn0027378.3.mrna1;geneID=FBgn0027378.3.path1;Name=FBgn0027378.3;Dir=sensecoverage=99.9;identity=97.7;matches=1060;mismatches=23;indels=2;unknowns=0;Target=FBgn0027378.3 413 496 +;locus=RLOC_00014237
Chr2	stalkie_big_nohaplotig	exon	4371011	4371035	96	+	.	Parent=FBgn0027378.3.mrna1;Target=FBgn0027378.3 1 25 +
Chr2	stalkie_big_nohaplotig	exon	4371094	4371211	99	+	.	Parent=FBgn0027378.3.mrna1;Target=FBgn0027378.3 26 143 +
Chr2	stalkie_big_nohaplotig	exon	4371265	4371380	100	+	.	Parent=FBgn0027378.3.mrna1;Target=FBgn0027378.3 144 259 +
Chr2	stalkie_big_nohaplotig	exon	4371439	4372262	97	+	.	Parent=FBgn0027378.3.mrna1;Target=FBgn0027378.3 260 1085 +
Chr2	stalkie_big_nohaplotig	CDS	4371592	4371673	.	+	0	Parent=FBgn0027378.3.mrna1
Chr2	gffcl	locus	4434036	4434530	.	-	.	ID=RLOC_00014238;geneIDs=comp146775_c0_seq1.path1;transcripts=comp146775_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4434036	4434530	.	-	.	ID=comp146775_c0_seq1.mrna1;geneID=comp146775_c0_seq1.path1;Name=comp146775_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.4;matches=482;mismatches=13;indels=0;unknowns=0;Target=comp146775_c0_seq1 495 1 .;CDS_Target=comp146775_c0_seq1 323 243 .;locus=RLOC_00014238
Chr2	stalkie_big_nohaplotig	exon	4434036	4434530	97	-	.	Parent=comp146775_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4434208	4434288	.	-	0	Parent=comp146775_c0_seq1.mrna1
Chr2	gffcl	locus	4468271	4586753	.	-	.	ID=RLOC_00014239;geneIDs=FBgn0000633.1.path1;transcripts=FBgn0000633.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4468271	4586753	.	-	.	ID=FBgn0000633.1.mrna1;geneID=FBgn0000633.1.path1;Name=FBgn0000633.1;Dir=sensecoverage=59.2;identity=98.5;matches=1803;mismatches=5;indels=22;unknowns=0;locus=RLOC_00014239
Chr2	stalkie_big_nohaplotig	exon	4468271	4468502	99	-	.	Parent=FBgn0000633.1.mrna1;Target=FBgn0000633.1 1577 1809 +
Chr2	stalkie_big_nohaplotig	exon	4469239	4469416	100	-	.	Parent=FBgn0000633.1.mrna1;Target=FBgn0000633.1 1399 1576 +
Chr2	stalkie_big_nohaplotig	exon	4483707	4484911	99	-	.	Parent=FBgn0000633.1.mrna1;Target=FBgn0000633.1 194 1398 +
Chr2	stalkie_big_nohaplotig	exon	4586540	4586753	90	-	.	Parent=FBgn0000633.1.mrna1;Target=FBgn0000633.1 1 193 +
Chr2	stalkie_big_nohaplotig	CDS	4468271	4468502	.	-	2	Parent=FBgn0000633.1.mrna1;Target=FBgn0000633.1 1577 1809 +
Chr2	stalkie_big_nohaplotig	CDS	4469239	4469416	.	-	0	Parent=FBgn0000633.1.mrna1;Target=FBgn0000633.1 1399 1576 +
Chr2	stalkie_big_nohaplotig	CDS	4483707	4484911	.	-	2	Parent=FBgn0000633.1.mrna1;Target=FBgn0000633.1 194 1398 +
Chr2	stalkie_big_nohaplotig	CDS	4586540	4586753	.	-	0	Parent=FBgn0000633.1.mrna1;Target=FBgn0000633.1 1 193 +
Chr2	gffcl	locus	4502707	4503504	.	+	.	ID=RLOC_00014240;geneIDs=comp157788_c0_seq1.path1;transcripts=comp157788_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4502707	4503504	.	+	.	ID=comp157788_c0_seq1.mrna1;geneID=comp157788_c0_seq1.path1;Name=comp157788_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=793;mismatches=5;indels=0;unknowns=0;Target=comp157788_c0_seq1 798 1 .;CDS_Target=comp157788_c0_seq1 188 3 .;locus=RLOC_00014240
Chr2	stalkie_big_nohaplotig	exon	4502707	4503504	99	+	.	Parent=comp157788_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4502709	4502894	.	+	0	Parent=comp157788_c0_seq1.mrna1
Chr2	gffcl	locus	4554578	4555832	.	-	.	ID=RLOC_00014241;geneIDs=comp156557_c0_seq1.path1;transcripts=comp156557_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4554578	4555832	.	-	.	ID=comp156557_c0_seq1.mrna1;geneID=comp156557_c0_seq1.path1;Name=comp156557_c0_seq1;Dir=sensecoverage=100.0;identity=99.2;matches=1180;mismatches=10;indels=0;unknowns=0;Target=comp156557_c0_seq1 973 1113 +;locus=RLOC_00014241
Chr2	stalkie_big_nohaplotig	exon	4554578	4555633	99	-	.	Parent=comp156557_c0_seq1.mrna1;Target=comp156557_c0_seq1 135 1190 +
Chr2	stalkie_big_nohaplotig	exon	4555699	4555832	97	-	.	Parent=comp156557_c0_seq1.mrna1;Target=comp156557_c0_seq1 1 134 +
Chr2	stalkie_big_nohaplotig	CDS	4554655	4554795	.	-	0	Parent=comp156557_c0_seq1.mrna1
Chr2	gffcl	locus	4660528	4662914	.	+	.	ID=RLOC_00014242;geneIDs=comp149365_c0_seq1.path1;transcripts=comp149365_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4660528	4662914	.	+	.	ID=comp149365_c0_seq1.mrna1;geneID=comp149365_c0_seq1.path1;Name=comp149365_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=1179;mismatches=8;indels=0;unknowns=0;Target=comp149365_c0_seq1 791 1081 +;locus=RLOC_00014242
Chr2	stalkie_big_nohaplotig	exon	4660528	4660762	99	+	.	Parent=comp149365_c0_seq1.mrna1;Target=comp149365_c0_seq1 1 235 +
Chr2	stalkie_big_nohaplotig	exon	4661963	4662914	99	+	.	Parent=comp149365_c0_seq1.mrna1;Target=comp149365_c0_seq1 236 1187 +
Chr2	stalkie_big_nohaplotig	CDS	4662518	4662808	.	+	0	Parent=comp149365_c0_seq1.mrna1
Chr2	gffcl	locus	4718039	5473900	.	.	.	ID=RLOC_00014244;geneIDs=FBgn0033448.1.path1,comp157197_c0_seq1.path1;transcripts=comp157197_c0_seq1.mrna1,FBgn0033448.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4718039	5472495	.	+	.	ID=comp157197_c0_seq1.mrna1;geneID=comp157197_c0_seq1.path1;Name=comp157197_c0_seq1;Dir=indeterminatecoverage=85.4;identity=94.3;matches=395;mismatches=8;indels=16;unknowns=0;Target=comp157197_c0_seq1 282 214 .;locus=RLOC_00014244
Chr2	stalkie_big_nohaplotig	exon	4718039	4718346	96	+	.	Parent=comp157197_c0_seq1.mrna1;Target=comp157197_c0_seq1 308 1 .
Chr2	stalkie_big_nohaplotig	exon	5411518	5411519	100	+	.	Parent=comp157197_c0_seq1.mrna1;Target=comp157197_c0_seq1 310 309 .
Chr2	stalkie_big_nohaplotig	exon	5413833	5413844	100	+	.	Parent=comp157197_c0_seq1.mrna1;Target=comp157197_c0_seq1 322 311 .
Chr2	stalkie_big_nohaplotig	exon	5424989	5425005	60	+	.	Parent=comp157197_c0_seq1.mrna1;Target=comp157197_c0_seq1 341 323 .
Chr2	stalkie_big_nohaplotig	exon	5428122	5428132	100	+	.	Parent=comp157197_c0_seq1.mrna1;Target=comp157197_c0_seq1 352 342 .
Chr2	stalkie_big_nohaplotig	exon	5430442	5430449	100	+	.	Parent=comp157197_c0_seq1.mrna1;Target=comp157197_c0_seq1 360 353 .
Chr2	stalkie_big_nohaplotig	exon	5444801	5444806	83	+	.	Parent=comp157197_c0_seq1.mrna1;Target=comp157197_c0_seq1 365 361 .
Chr2	stalkie_big_nohaplotig	exon	5445095	5445100	100	+	.	Parent=comp157197_c0_seq1.mrna1;Target=comp157197_c0_seq1 371 366 .
Chr2	stalkie_big_nohaplotig	exon	5452023	5452024	100	+	.	Parent=comp157197_c0_seq1.mrna1;Target=comp157197_c0_seq1 373 372 .
Chr2	stalkie_big_nohaplotig	exon	5460183	5460193	90	+	.	Parent=comp157197_c0_seq1.mrna1;Target=comp157197_c0_seq1 384 374 .
Chr2	stalkie_big_nohaplotig	exon	5463658	5463671	71	+	.	Parent=comp157197_c0_seq1.mrna1;Target=comp157197_c0_seq1 397 385 .
Chr2	stalkie_big_nohaplotig	exon	5469772	5469779	100	+	.	Parent=comp157197_c0_seq1.mrna1;Target=comp157197_c0_seq1 405 398 .
Chr2	stalkie_big_nohaplotig	exon	5472490	5472495	100	+	.	Parent=comp157197_c0_seq1.mrna1;Target=comp157197_c0_seq1 411 406 .
Chr2	stalkie_big_nohaplotig	CDS	4718252	4718320	.	+	0	Parent=comp157197_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5472311	5473900	.	-	.	ID=FBgn0033448.1.mrna1;geneID=FBgn0033448.1.path1;Name=FBgn0033448.1;Dir=indeterminatecoverage=98.7;identity=99.5;matches=1582;mismatches=8;indels=0;unknowns=0;Target=FBgn0033448.1 1611 22 .;locus=RLOC_00014244
Chr2	stalkie_big_nohaplotig	exon	5472311	5473900	99	-	.	Parent=FBgn0033448.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5472311	5473900	.	-	0	Parent=FBgn0033448.1.mrna1
Chr2	gffcl	locus	4718853	4719258	.	+	.	ID=RLOC_00014245;geneIDs=comp148095_c0_seq1.path1;transcripts=comp148095_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4718853	4719258	.	+	.	ID=comp148095_c0_seq1.mrna1;geneID=comp148095_c0_seq1.path1;Name=comp148095_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=404;mismatches=2;indels=2;unknowns=0;Target=comp148095_c0_seq1 408 1 .;CDS_Target=comp148095_c0_seq1 127 5 .;locus=RLOC_00014245
Chr2	stalkie_big_nohaplotig	exon	4718853	4719258	99	+	.	Parent=comp148095_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4718857	4718977	.	+	0	Parent=comp148095_c0_seq1.mrna1
Chr2	gffcl	locus	4748162	4749687	.	+	.	ID=RLOC_00014246;geneIDs=comp153356_c2_seq1.path1;transcripts=comp153356_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4748162	4749687	.	+	.	ID=comp153356_c2_seq1.mrna1;geneID=comp153356_c2_seq1.path1;Name=comp153356_c2_seq1;Dir=indeterminatecoverage=99.7;identity=98.0;matches=1502;mismatches=23;indels=8;unknowns=0;Target=comp153356_c2_seq1 1532 1 .;CDS_Target=comp153356_c2_seq1 1234 1010 .;locus=RLOC_00014246
Chr2	stalkie_big_nohaplotig	exon	4748162	4749687	97	+	.	Parent=comp153356_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4749165	4749389	.	+	0	Parent=comp153356_c2_seq1.mrna1
Chr2	gffcl	locus	4749881	4751066	.	+	.	ID=RLOC_00014247;geneIDs=FBgn0032478.1.path1;transcripts=FBgn0032478.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4749881	4751066	.	+	.	ID=FBgn0032478.1.mrna1;geneID=FBgn0032478.1.path1;Name=FBgn0032478.1;Dir=sensecoverage=100.0;identity=99.7;matches=1020;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014247
Chr2	stalkie_big_nohaplotig	exon	4749881	4749967	100	+	.	Parent=FBgn0032478.1.mrna1;Target=FBgn0032478.1 1 87 +
Chr2	stalkie_big_nohaplotig	exon	4750019	4750184	100	+	.	Parent=FBgn0032478.1.mrna1;Target=FBgn0032478.1 88 253 +
Chr2	stalkie_big_nohaplotig	exon	4750297	4751066	99	+	.	Parent=FBgn0032478.1.mrna1;Target=FBgn0032478.1 254 1023 +
Chr2	stalkie_big_nohaplotig	CDS	4749881	4749967	.	+	0	Parent=FBgn0032478.1.mrna1;Target=FBgn0032478.1 1 87 +
Chr2	stalkie_big_nohaplotig	CDS	4750019	4750184	.	+	0	Parent=FBgn0032478.1.mrna1;Target=FBgn0032478.1 88 253 +
Chr2	stalkie_big_nohaplotig	CDS	4750297	4751066	.	+	2	Parent=FBgn0032478.1.mrna1;Target=FBgn0032478.1 254 1023 +
Chr2	gffcl	locus	4753978	4754657	.	+	.	ID=RLOC_00014248;geneIDs=comp136845_c1_seq1.path1;transcripts=comp136845_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4753978	4754657	.	+	.	ID=comp136845_c1_seq1.mrna1;geneID=comp136845_c1_seq1.path1;Name=comp136845_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=678;mismatches=2;indels=0;unknowns=0;Target=comp136845_c1_seq1 680 1 .;CDS_Target=comp136845_c1_seq1 599 300 .;locus=RLOC_00014248
Chr2	stalkie_big_nohaplotig	exon	4753978	4754657	99	+	.	Parent=comp136845_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4754277	4754576	.	+	0	Parent=comp136845_c1_seq1.mrna1
Chr2	gffcl	locus	4768608	4769468	.	-	.	ID=RLOC_00014249;geneIDs=comp147230_c0_seq1.path1,comp156311_c0_seq1.path1;transcripts=comp156311_c0_seq1.mrna1,comp147230_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4768608	4769468	.	-	.	ID=comp156311_c0_seq1.mrna1;geneID=comp156311_c0_seq1.path1;Name=comp156311_c0_seq1;Dir=sensecoverage=86.1;identity=94.3;matches=722;mismatches=8;indels=36;unknowns=0;locus=RLOC_00014249
Chr2	stalkie_big_nohaplotig	exon	4768608	4768887	90	-	.	Parent=comp156311_c0_seq1.mrna1;Target=comp156311_c0_seq1 588 876 +
Chr2	stalkie_big_nohaplotig	exon	4768949	4769160	100	-	.	Parent=comp156311_c0_seq1.mrna1;Target=comp156311_c0_seq1 376 587 +
Chr2	stalkie_big_nohaplotig	exon	4769219	4769468	93	-	.	Parent=comp156311_c0_seq1.mrna1;Target=comp156311_c0_seq1 123 375 +
Chr2	stalkie_big_nohaplotig	CDS	4768735	4768887	.	-	0	Parent=comp156311_c0_seq1.mrna1;Target=comp156311_c0_seq1 588 749 +
Chr2	stalkie_big_nohaplotig	CDS	4768949	4769160	.	-	2	Parent=comp156311_c0_seq1.mrna1;Target=comp156311_c0_seq1 376 587 +
Chr2	stalkie_big_nohaplotig	CDS	4769219	4769267	.	-	0	Parent=comp156311_c0_seq1.mrna1;Target=comp156311_c0_seq1 327 375 +
Chr2	stalkie_big_nohaplotig	mRNA	4769186	4769241	.	-	.	ID=comp147230_c0_seq1.mrna1;geneID=comp147230_c0_seq1.path1;Name=comp147230_c0_seq1;Dir=indeterminatecoverage=16.7;identity=100.0;matches=56;mismatches=0;indels=0;unknowns=0;Target=comp147230_c0_seq1 56 1 .;locus=RLOC_00014249
Chr2	stalkie_big_nohaplotig	exon	4769186	4769241	100	-	.	Parent=comp147230_c0_seq1.mrna1
Chr2	gffcl	locus	4781282	4784154	.	-	.	ID=RLOC_00014250;geneIDs=FBgn0033859.1.path1;transcripts=FBgn0033859.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4781282	4784154	.	-	.	ID=FBgn0033859.1.mrna1;geneID=FBgn0033859.1.path1;Name=FBgn0033859.1;Dir=sensecoverage=100.0;identity=99.1;matches=2619;mismatches=24;indels=0;unknowns=0;locus=RLOC_00014250
Chr2	stalkie_big_nohaplotig	exon	4781282	4781839	99	-	.	Parent=FBgn0033859.1.mrna1;Target=FBgn0033859.1 2086 2643 +
Chr2	stalkie_big_nohaplotig	exon	4781897	4782641	99	-	.	Parent=FBgn0033859.1.mrna1;Target=FBgn0033859.1 1341 2085 +
Chr2	stalkie_big_nohaplotig	exon	4782703	4783290	98	-	.	Parent=FBgn0033859.1.mrna1;Target=FBgn0033859.1 753 1340 +
Chr2	stalkie_big_nohaplotig	exon	4783345	4784042	99	-	.	Parent=FBgn0033859.1.mrna1;Target=FBgn0033859.1 55 752 +
Chr2	stalkie_big_nohaplotig	exon	4784101	4784154	100	-	.	Parent=FBgn0033859.1.mrna1;Target=FBgn0033859.1 1 54 +
Chr2	stalkie_big_nohaplotig	CDS	4781282	4781839	.	-	0	Parent=FBgn0033859.1.mrna1;Target=FBgn0033859.1 2086 2643 +
Chr2	stalkie_big_nohaplotig	CDS	4781897	4782641	.	-	1	Parent=FBgn0033859.1.mrna1;Target=FBgn0033859.1 1341 2085 +
Chr2	stalkie_big_nohaplotig	CDS	4782703	4783290	.	-	1	Parent=FBgn0033859.1.mrna1;Target=FBgn0033859.1 753 1340 +
Chr2	stalkie_big_nohaplotig	CDS	4783345	4784042	.	-	0	Parent=FBgn0033859.1.mrna1;Target=FBgn0033859.1 55 752 +
Chr2	stalkie_big_nohaplotig	CDS	4784101	4784154	.	-	0	Parent=FBgn0033859.1.mrna1;Target=FBgn0033859.1 1 54 +
Chr2	gffcl	locus	4784732	4785953	.	+	.	ID=RLOC_00014251;geneIDs=comp155089_c0_seq1.path1;transcripts=comp155089_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4784732	4785953	.	+	.	ID=comp155089_c0_seq1.mrna1;geneID=comp155089_c0_seq1.path1;Name=comp155089_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1215;mismatches=6;indels=1;unknowns=0;Target=comp155089_c0_seq1 1221 1 .;CDS_Target=comp155089_c0_seq1 1218 1093 .;locus=RLOC_00014251
Chr2	stalkie_big_nohaplotig	exon	4784732	4785953	99	+	.	Parent=comp155089_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4785824	4785950	.	+	0	Parent=comp155089_c0_seq1.mrna1
Chr2	gffcl	locus	4789625	4789973	.	-	.	ID=RLOC_00014252;geneIDs=comp152294_c0_seq1.path1;transcripts=comp152294_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4789625	4789973	.	-	.	ID=comp152294_c0_seq1.mrna1;geneID=comp152294_c0_seq1.path1;Name=comp152294_c0_seq1;Dir=sensecoverage=100.0;identity=97.3;matches=292;mismatches=5;indels=3;unknowns=0;Target=comp152294_c0_seq1 139 297 +;locus=RLOC_00014252
Chr2	stalkie_big_nohaplotig	exon	4789625	4789794	100	-	.	Parent=comp152294_c0_seq1.mrna1;Target=comp152294_c0_seq1 129 298 +
Chr2	stalkie_big_nohaplotig	exon	4789845	4789973	93	-	.	Parent=comp152294_c0_seq1.mrna1;Target=comp152294_c0_seq1 1 128 +
Chr2	stalkie_big_nohaplotig	CDS	4789626	4789784	.	-	0	Parent=comp152294_c0_seq1.mrna1
Chr2	gffcl	locus	4796550	4838517	.	+	.	ID=RLOC_00014253;geneIDs=FBgn0027581.1.path1;transcripts=FBgn0027581.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4796550	4838517	.	+	.	ID=FBgn0027581.1.mrna1;geneID=FBgn0027581.1.path1;Name=FBgn0027581.1;Dir=sensecoverage=100.0;identity=99.5;matches=2314;mismatches=11;indels=0;unknowns=0;locus=RLOC_00014253
Chr2	stalkie_big_nohaplotig	exon	4796550	4797514	99	+	.	Parent=FBgn0027581.1.mrna1;Target=FBgn0027581.1 1 965 +
Chr2	stalkie_big_nohaplotig	exon	4833784	4834182	98	+	.	Parent=FBgn0027581.1.mrna1;Target=FBgn0027581.1 966 1364 +
Chr2	stalkie_big_nohaplotig	exon	4834250	4834373	99	+	.	Parent=FBgn0027581.1.mrna1;Target=FBgn0027581.1 1365 1488 +
Chr2	stalkie_big_nohaplotig	exon	4834527	4834675	97	+	.	Parent=FBgn0027581.1.mrna1;Target=FBgn0027581.1 1489 1637 +
Chr2	stalkie_big_nohaplotig	exon	4836266	4836298	93	+	.	Parent=FBgn0027581.1.mrna1;Target=FBgn0027581.1 1638 1670 +
Chr2	stalkie_big_nohaplotig	exon	4837001	4837118	100	+	.	Parent=FBgn0027581.1.mrna1;Target=FBgn0027581.1 1671 1788 +
Chr2	stalkie_big_nohaplotig	exon	4837179	4837372	100	+	.	Parent=FBgn0027581.1.mrna1;Target=FBgn0027581.1 1789 1982 +
Chr2	stalkie_big_nohaplotig	exon	4838112	4838316	100	+	.	Parent=FBgn0027581.1.mrna1;Target=FBgn0027581.1 1983 2187 +
Chr2	stalkie_big_nohaplotig	exon	4838380	4838517	100	+	.	Parent=FBgn0027581.1.mrna1;Target=FBgn0027581.1 2188 2325 +
Chr2	stalkie_big_nohaplotig	CDS	4796550	4797514	.	+	0	Parent=FBgn0027581.1.mrna1;Target=FBgn0027581.1 1 965 +
Chr2	stalkie_big_nohaplotig	CDS	4833784	4834182	.	+	1	Parent=FBgn0027581.1.mrna1;Target=FBgn0027581.1 966 1364 +
Chr2	stalkie_big_nohaplotig	CDS	4834250	4834373	.	+	1	Parent=FBgn0027581.1.mrna1;Target=FBgn0027581.1 1365 1488 +
Chr2	stalkie_big_nohaplotig	CDS	4834527	4834675	.	+	0	Parent=FBgn0027581.1.mrna1;Target=FBgn0027581.1 1489 1637 +
Chr2	stalkie_big_nohaplotig	CDS	4836266	4836298	.	+	1	Parent=FBgn0027581.1.mrna1;Target=FBgn0027581.1 1638 1670 +
Chr2	stalkie_big_nohaplotig	CDS	4837001	4837118	.	+	1	Parent=FBgn0027581.1.mrna1;Target=FBgn0027581.1 1671 1788 +
Chr2	stalkie_big_nohaplotig	CDS	4837179	4837372	.	+	0	Parent=FBgn0027581.1.mrna1;Target=FBgn0027581.1 1789 1982 +
Chr2	stalkie_big_nohaplotig	CDS	4838112	4838316	.	+	1	Parent=FBgn0027581.1.mrna1;Target=FBgn0027581.1 1983 2187 +
Chr2	stalkie_big_nohaplotig	CDS	4838380	4838517	.	+	0	Parent=FBgn0027581.1.mrna1;Target=FBgn0027581.1 2188 2325 +
Chr2	gffcl	locus	4841301	4841675	.	+	.	ID=RLOC_00014254;geneIDs=FBgn0024432.3.path1;transcripts=FBgn0024432.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4841301	4841675	.	+	.	ID=FBgn0024432.3.mrna1;geneID=FBgn0024432.3.path1;Name=FBgn0024432.3;Dir=indeterminatecoverage=100.0;identity=100.0;matches=375;mismatches=0;indels=0;unknowns=0;Target=FBgn0024432.3 375 1 .;locus=RLOC_00014254
Chr2	stalkie_big_nohaplotig	exon	4841301	4841675	100	+	.	Parent=FBgn0024432.3.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4841301	4841675	.	+	0	Parent=FBgn0024432.3.mrna1
Chr2	gffcl	locus	4875320	4876254	.	+	.	ID=RLOC_00014255;geneIDs=FBgn0028694.2.path1;transcripts=FBgn0028694.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4875320	4876254	.	+	.	ID=FBgn0028694.2.mrna1;geneID=FBgn0028694.2.path1;Name=FBgn0028694.2;Dir=indeterminatecoverage=98.9;identity=98.7;matches=923;mismatches=12;indels=0;unknowns=0;Target=FBgn0028694.2 945 11 .;CDS_Target=FBgn0028694.2 945 13 .;locus=RLOC_00014255
Chr2	stalkie_big_nohaplotig	exon	4875320	4876254	98	+	.	Parent=FBgn0028694.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4875322	4876254	.	+	0	Parent=FBgn0028694.2.mrna1
Chr2	gffcl	locus	4880267	4883943	.	+	.	ID=RLOC_00014256;geneIDs=comp160891_c0_seq1.path1;transcripts=comp160891_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4880267	4883943	.	+	.	ID=comp160891_c0_seq1.mrna1;geneID=comp160891_c0_seq1.path1;Name=comp160891_c0_seq1;Dir=antisensecoverage=99.9;identity=98.9;matches=1918;mismatches=22;indels=0;unknowns=0;locus=RLOC_00014256
Chr2	stalkie_big_nohaplotig	exon	4880267	4880422	100	+	.	Parent=comp160891_c0_seq1.mrna1;Target=comp160891_c0_seq1 1788 1943 -
Chr2	stalkie_big_nohaplotig	exon	4880481	4880546	100	+	.	Parent=comp160891_c0_seq1.mrna1;Target=comp160891_c0_seq1 1722 1787 -
Chr2	stalkie_big_nohaplotig	exon	4880628	4880794	100	+	.	Parent=comp160891_c0_seq1.mrna1;Target=comp160891_c0_seq1 1555 1721 -
Chr2	stalkie_big_nohaplotig	exon	4880855	4880960	100	+	.	Parent=comp160891_c0_seq1.mrna1;Target=comp160891_c0_seq1 1449 1554 -
Chr2	stalkie_big_nohaplotig	exon	4881688	4881758	100	+	.	Parent=comp160891_c0_seq1.mrna1;Target=comp160891_c0_seq1 1378 1448 -
Chr2	stalkie_big_nohaplotig	exon	4881810	4881879	98	+	.	Parent=comp160891_c0_seq1.mrna1;Target=comp160891_c0_seq1 1308 1377 -
Chr2	stalkie_big_nohaplotig	exon	4881933	4882075	97	+	.	Parent=comp160891_c0_seq1.mrna1;Target=comp160891_c0_seq1 1165 1307 -
Chr2	stalkie_big_nohaplotig	exon	4882136	4882205	100	+	.	Parent=comp160891_c0_seq1.mrna1;Target=comp160891_c0_seq1 1094 1163 -
Chr2	stalkie_big_nohaplotig	exon	4882260	4882334	100	+	.	Parent=comp160891_c0_seq1.mrna1;Target=comp160891_c0_seq1 1019 1093 -
Chr2	stalkie_big_nohaplotig	exon	4882389	4882459	100	+	.	Parent=comp160891_c0_seq1.mrna1;Target=comp160891_c0_seq1 948 1018 -
Chr2	stalkie_big_nohaplotig	exon	4882533	4882593	96	+	.	Parent=comp160891_c0_seq1.mrna1;Target=comp160891_c0_seq1 887 947 -
Chr2	stalkie_big_nohaplotig	exon	4882643	4882807	100	+	.	Parent=comp160891_c0_seq1.mrna1;Target=comp160891_c0_seq1 722 886 -
Chr2	stalkie_big_nohaplotig	exon	4882956	4883135	99	+	.	Parent=comp160891_c0_seq1.mrna1;Target=comp160891_c0_seq1 542 721 -
Chr2	stalkie_big_nohaplotig	exon	4883188	4883318	98	+	.	Parent=comp160891_c0_seq1.mrna1;Target=comp160891_c0_seq1 411 541 -
Chr2	stalkie_big_nohaplotig	exon	4883384	4883419	97	+	.	Parent=comp160891_c0_seq1.mrna1;Target=comp160891_c0_seq1 375 410 -
Chr2	stalkie_big_nohaplotig	exon	4883514	4883569	100	+	.	Parent=comp160891_c0_seq1.mrna1;Target=comp160891_c0_seq1 319 374 -
Chr2	stalkie_big_nohaplotig	exon	4883628	4883943	96	+	.	Parent=comp160891_c0_seq1.mrna1;Target=comp160891_c0_seq1 3 318 -
Chr2	stalkie_big_nohaplotig	CDS	4882773	4882807	.	+	0	Parent=comp160891_c0_seq1.mrna1;Target=comp160891_c0_seq1 722 756 .
Chr2	stalkie_big_nohaplotig	CDS	4882956	4883034	.	+	1	Parent=comp160891_c0_seq1.mrna1;Target=comp160891_c0_seq1 643 721 .
Chr2	gffcl	locus	4891113	4892589	.	+	.	ID=RLOC_00014257;geneIDs=FBgn0033855.1.path1;transcripts=FBgn0033855.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4891113	4892589	.	+	.	ID=FBgn0033855.1.mrna1;geneID=FBgn0033855.1.path1;Name=FBgn0033855.1;Dir=sensecoverage=100.0;identity=98.7;matches=1341;mismatches=18;indels=0;unknowns=0;locus=RLOC_00014257
Chr2	stalkie_big_nohaplotig	exon	4891113	4891328	98	+	.	Parent=FBgn0033855.1.mrna1;Target=FBgn0033855.1 1 216 +
Chr2	stalkie_big_nohaplotig	exon	4891386	4891811	98	+	.	Parent=FBgn0033855.1.mrna1;Target=FBgn0033855.1 217 642 +
Chr2	stalkie_big_nohaplotig	exon	4891873	4892589	98	+	.	Parent=FBgn0033855.1.mrna1;Target=FBgn0033855.1 643 1359 +
Chr2	stalkie_big_nohaplotig	CDS	4891113	4891328	.	+	0	Parent=FBgn0033855.1.mrna1;Target=FBgn0033855.1 1 216 +
Chr2	stalkie_big_nohaplotig	CDS	4891386	4891811	.	+	0	Parent=FBgn0033855.1.mrna1;Target=FBgn0033855.1 217 642 +
Chr2	stalkie_big_nohaplotig	CDS	4891873	4892589	.	+	0	Parent=FBgn0033855.1.mrna1;Target=FBgn0033855.1 643 1359 +
Chr2	gffcl	locus	4893172	4894935	.	-	.	ID=RLOC_00014258;geneIDs=FBgn0014877.1.path1;transcripts=FBgn0014877.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4893172	4894935	.	-	.	ID=FBgn0014877.1.mrna1;geneID=FBgn0014877.1.path1;Name=FBgn0014877.1;Dir=sensecoverage=100.0;identity=99.3;matches=727;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014258
Chr2	stalkie_big_nohaplotig	exon	4893172	4893279	100	-	.	Parent=FBgn0014877.1.mrna1;Target=FBgn0014877.1 625 732 +
Chr2	stalkie_big_nohaplotig	exon	4894124	4894279	100	-	.	Parent=FBgn0014877.1.mrna1;Target=FBgn0014877.1 469 624 +
Chr2	stalkie_big_nohaplotig	exon	4894330	4894702	98	-	.	Parent=FBgn0014877.1.mrna1;Target=FBgn0014877.1 96 468 +
Chr2	stalkie_big_nohaplotig	exon	4894841	4894935	98	-	.	Parent=FBgn0014877.1.mrna1;Target=FBgn0014877.1 1 95 +
Chr2	stalkie_big_nohaplotig	CDS	4893172	4893279	.	-	0	Parent=FBgn0014877.1.mrna1;Target=FBgn0014877.1 625 732 +
Chr2	stalkie_big_nohaplotig	CDS	4894124	4894279	.	-	0	Parent=FBgn0014877.1.mrna1;Target=FBgn0014877.1 469 624 +
Chr2	stalkie_big_nohaplotig	CDS	4894330	4894702	.	-	1	Parent=FBgn0014877.1.mrna1;Target=FBgn0014877.1 96 468 +
Chr2	stalkie_big_nohaplotig	CDS	4894841	4894923	.	-	0	Parent=FBgn0014877.1.mrna1;Target=FBgn0014877.1 13 95 +
Chr2	gffcl	locus	4899571	4900616	.	+	.	ID=RLOC_00014259;geneIDs=comp155398_c0_seq1.path1;transcripts=comp155398_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4899571	4900616	.	+	.	ID=comp155398_c0_seq1.mrna1;geneID=comp155398_c0_seq1.path1;Name=comp155398_c0_seq1;Dir=indeterminatecoverage=76.3;identity=98.2;matches=666;mismatches=12;indels=0;unknowns=0;Target=comp155398_c0_seq1 711 595 .;locus=RLOC_00014259
Chr2	stalkie_big_nohaplotig	exon	4899571	4899646	93	+	.	Parent=comp155398_c0_seq1.mrna1;Target=comp155398_c0_seq1 287 212 .
Chr2	stalkie_big_nohaplotig	exon	4900015	4900616	98	+	.	Parent=comp155398_c0_seq1.mrna1;Target=comp155398_c0_seq1 889 288 .
Chr2	stalkie_big_nohaplotig	CDS	4900322	4900438	.	+	0	Parent=comp155398_c0_seq1.mrna1
Chr2	gffcl	locus	4951329	4951669	.	-	.	ID=RLOC_00014260;geneIDs=comp147672_c0_seq1.path1;transcripts=comp147672_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4951329	4951669	.	-	.	ID=comp147672_c0_seq1.mrna1;geneID=comp147672_c0_seq1.path1;Name=comp147672_c0_seq1;Dir=indeterminatecoverage=93.7;identity=99.4;matches=339;mismatches=2;indels=0;unknowns=0;Target=comp147672_c0_seq1 364 24 .;CDS_Target=comp147672_c0_seq1 113 24 .;locus=RLOC_00014260
Chr2	stalkie_big_nohaplotig	exon	4951329	4951669	99	-	.	Parent=comp147672_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4951580	4951669	.	-	0	Parent=comp147672_c0_seq1.mrna1
Chr2	gffcl	locus	4954124	4954734	.	-	.	ID=RLOC_00014261;geneIDs=comp151987_c0_seq1.path1;transcripts=comp151987_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4954124	4954734	.	-	.	ID=comp151987_c0_seq1.mrna1;geneID=comp151987_c0_seq1.path1;Name=comp151987_c0_seq1;Dir=indeterminatecoverage=92.4;identity=98.7;matches=604;mismatches=2;indels=6;unknowns=0;Target=comp151987_c0_seq1 657 51 .;CDS_Target=comp151987_c0_seq1 521 453 .;locus=RLOC_00014261
Chr2	stalkie_big_nohaplotig	exon	4954124	4954734	98	-	.	Parent=comp151987_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4954260	4954328	.	-	0	Parent=comp151987_c0_seq1.mrna1
Chr2	gffcl	locus	4956362	4957758	.	+	.	ID=RLOC_00014262;geneIDs=comp147299_c0_seq1.path1,comp148035_c0_seq1.path1;transcripts=comp147299_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4956362	4957256	.	+	.	ID=comp147299_c0_seq1.mrna1;geneID=comp147299_c0_seq1.path1;Name=comp147299_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=885;mismatches=10;indels=5;unknowns=0;Target=comp147299_c0_seq1 900 1 .;CDS_Target=comp147299_c0_seq1 105 1 .;locus=RLOC_00014262
Chr2	stalkie_big_nohaplotig	exon	4956362	4957256	98	+	.	Parent=comp147299_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4956362	4956461	.	+	0	Parent=comp147299_c0_seq1.mrna1
Chr2	gffcl	locus	4964988	4976413	.	+	.	ID=RLOC_00014263;geneIDs=FBgn0053156.1.path1,comp147944_c0_seq1.path1;transcripts=FBgn0053156.1.mrna1,comp147944_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4964988	4976413	.	+	.	ID=FBgn0053156.1.mrna1;geneID=FBgn0053156.1.path1;Name=FBgn0053156.1;Dir=sensecoverage=100.0;identity=99.9;matches=1669;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014263
Chr2	stalkie_big_nohaplotig	exon	4964988	4965373	100	+	.	Parent=FBgn0053156.1.mrna1;Target=FBgn0053156.1 1 386 +
Chr2	stalkie_big_nohaplotig	exon	4974325	4974408	100	+	.	Parent=FBgn0053156.1.mrna1;Target=FBgn0053156.1 387 470 +
Chr2	stalkie_big_nohaplotig	exon	4975006	4975239	100	+	.	Parent=FBgn0053156.1.mrna1;Target=FBgn0053156.1 471 704 +
Chr2	stalkie_big_nohaplotig	exon	4975312	4975729	99	+	.	Parent=FBgn0053156.1.mrna1;Target=FBgn0053156.1 705 1122 +
Chr2	stalkie_big_nohaplotig	exon	4975799	4976056	99	+	.	Parent=FBgn0053156.1.mrna1;Target=FBgn0053156.1 1123 1380 +
Chr2	stalkie_big_nohaplotig	exon	4976123	4976413	100	+	.	Parent=FBgn0053156.1.mrna1;Target=FBgn0053156.1 1381 1671 +
Chr2	stalkie_big_nohaplotig	CDS	4964988	4965373	.	+	0	Parent=FBgn0053156.1.mrna1;Target=FBgn0053156.1 1 386 +
Chr2	stalkie_big_nohaplotig	CDS	4974325	4974408	.	+	1	Parent=FBgn0053156.1.mrna1;Target=FBgn0053156.1 387 470 +
Chr2	stalkie_big_nohaplotig	CDS	4975006	4975239	.	+	1	Parent=FBgn0053156.1.mrna1;Target=FBgn0053156.1 471 704 +
Chr2	stalkie_big_nohaplotig	CDS	4975312	4975729	.	+	1	Parent=FBgn0053156.1.mrna1;Target=FBgn0053156.1 705 1122 +
Chr2	stalkie_big_nohaplotig	CDS	4975799	4976056	.	+	0	Parent=FBgn0053156.1.mrna1;Target=FBgn0053156.1 1123 1380 +
Chr2	stalkie_big_nohaplotig	CDS	4976123	4976413	.	+	0	Parent=FBgn0053156.1.mrna1;Target=FBgn0053156.1 1381 1671 +
Chr2	stalkie_big_nohaplotig	mRNA	4969910	4974346	.	+	.	ID=comp147944_c0_seq1.mrna1;geneID=comp147944_c0_seq1.path1;Name=comp147944_c0_seq1;Dir=antisensecoverage=90.4;identity=96.8;matches=522;mismatches=8;indels=9;unknowns=0;Target=comp147944_c0_seq1 411 488 .;locus=RLOC_00014263
Chr2	stalkie_big_nohaplotig	exon	4969910	4970417	96	+	.	Parent=comp147944_c0_seq1.mrna1;Target=comp147944_c0_seq1 23 539 -
Chr2	stalkie_big_nohaplotig	exon	4974325	4974346	100	+	.	Parent=comp147944_c0_seq1.mrna1;Target=comp147944_c0_seq1 1 22 -
Chr2	stalkie_big_nohaplotig	CDS	4969961	4970038	.	+	0	Parent=comp147944_c0_seq1.mrna1
Chr2	gffcl	locus	4969170	4969568	.	-	.	ID=RLOC_00014264;geneIDs=comp118091_c0_seq1.path1;transcripts=comp118091_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4969170	4969568	.	-	.	ID=comp118091_c0_seq1.mrna1;geneID=comp118091_c0_seq1.path1;Name=comp118091_c0_seq1;Dir=indeterminatecoverage=95.9;identity=98.7;matches=394;mismatches=5;indels=0;unknowns=0;Target=comp118091_c0_seq1 416 18 .;CDS_Target=comp118091_c0_seq1 295 107 .;locus=RLOC_00014264
Chr2	stalkie_big_nohaplotig	exon	4969170	4969568	98	-	.	Parent=comp118091_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4969291	4969479	.	-	0	Parent=comp118091_c0_seq1.mrna1
Chr2	gffcl	locus	4974600	4974905	.	-	.	ID=RLOC_00014265;geneIDs=comp143745_c0_seq1.path1;transcripts=comp143745_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4974600	4974905	.	-	.	ID=comp143745_c0_seq1.mrna1;geneID=comp143745_c0_seq1.path1;Name=comp143745_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=302;mismatches=4;indels=0;unknowns=0;Target=comp143745_c0_seq1 306 1 .;CDS_Target=comp143745_c0_seq1 252 181 .;locus=RLOC_00014265
Chr2	stalkie_big_nohaplotig	exon	4974600	4974905	98	-	.	Parent=comp143745_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4974654	4974725	.	-	0	Parent=comp143745_c0_seq1.mrna1
Chr2	gffcl	locus	4976894	4977387	.	+	.	ID=RLOC_00014266;geneIDs=comp145717_c1_seq1.path1;transcripts=comp145717_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4976894	4977387	.	+	.	ID=comp145717_c1_seq1.mrna1;geneID=comp145717_c1_seq1.path1;Name=comp145717_c1_seq1;Dir=indeterminatecoverage=99.6;identity=98.2;matches=485;mismatches=3;indels=6;unknowns=0;Target=comp145717_c1_seq1 488 1 .;CDS_Target=comp145717_c1_seq1 54 1 .;locus=RLOC_00014266
Chr2	stalkie_big_nohaplotig	exon	4976894	4977387	98	+	.	Parent=comp145717_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4976894	4976953	.	+	0	Parent=comp145717_c1_seq1.mrna1
Chr2	gffcl	locus	4984200	4984790	.	+	.	ID=RLOC_00014267;geneIDs=comp786708_c0_seq1.path1;transcripts=comp786708_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4984200	4984790	.	+	.	ID=comp786708_c0_seq1.mrna1;geneID=comp786708_c0_seq1.path1;Name=comp786708_c0_seq1;Dir=indeterminatecoverage=97.7;identity=98.3;matches=583;mismatches=7;indels=3;unknowns=0;Target=comp786708_c0_seq1 606 15 .;CDS_Target=comp786708_c0_seq1 149 84 .;locus=RLOC_00014267
Chr2	stalkie_big_nohaplotig	exon	4984200	4984790	98	+	.	Parent=comp786708_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	4984267	4984332	.	+	0	Parent=comp786708_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	4995153	5045599	.	+	.	ID=comp153407_c0_seq1.mrna2;geneID=comp153407_c0_seq1.path2;Name=comp153407_c0_seq1;Dir=indeterminatecoverage=52.8;identity=98.8;matches=756;mismatches=4;indels=5;unknowns=0;locus=RLOC_00014268
Chr2	stalkie_big_nohaplotig	exon	4995153	4995159	100	+	.	Parent=comp153407_c0_seq1.mrna2;Target=comp153407_c0_seq1 687 681 .
Chr2	stalkie_big_nohaplotig	exon	5006943	5006946	100	+	.	Parent=comp153407_c0_seq1.mrna2;Target=comp153407_c0_seq1 691 688 .
Chr2	stalkie_big_nohaplotig	exon	5036611	5036617	100	+	.	Parent=comp153407_c0_seq1.mrna2;Target=comp153407_c0_seq1 698 692 .
Chr2	stalkie_big_nohaplotig	exon	5038255	5038267	76	+	.	Parent=comp153407_c0_seq1.mrna2;Target=comp153407_c0_seq1 710 699 .
Chr2	stalkie_big_nohaplotig	exon	5044870	5045599	99	+	.	Parent=comp153407_c0_seq1.mrna2;Target=comp153407_c0_seq1 1444 711 .
Chr2	stalkie_big_nohaplotig	CDS	5045419	5045598	.	+	0	Parent=comp153407_c0_seq1.mrna2
Chr2	gffcl	locus	5022823	5023494	.	+	.	ID=RLOC_00014269;geneIDs=comp154230_c0_seq1.path1;transcripts=comp154230_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5022823	5023494	.	+	.	ID=comp154230_c0_seq1.mrna1;geneID=comp154230_c0_seq1.path1;Name=comp154230_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=664;mismatches=7;indels=1;unknowns=0;Target=comp154230_c0_seq1 671 1 .;CDS_Target=comp154230_c0_seq1 435 208 .;locus=RLOC_00014269
Chr2	stalkie_big_nohaplotig	exon	5022823	5023494	98	+	.	Parent=comp154230_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5023030	5023257	.	+	0	Parent=comp154230_c0_seq1.mrna1
Chr2	gffcl	locus	5037111	5037876	.	+	.	ID=RLOC_00014270;geneIDs=comp150572_c0_seq1.path1,comp151444_c0_seq1.path1;transcripts=comp151444_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5037111	5037544	.	+	.	ID=comp151444_c0_seq1.mrna1;geneID=comp151444_c0_seq1.path1;Name=comp151444_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.2;matches=409;mismatches=7;indels=18;unknowns=0;Target=comp151444_c0_seq1 416 1 .;CDS_Target=comp151444_c0_seq1 208 2 .;locus=RLOC_00014270
Chr2	stalkie_big_nohaplotig	exon	5037111	5037544	94	+	.	Parent=comp151444_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5037112	5037318	.	+	0	Parent=comp151444_c0_seq1.mrna1
Chr2	gffcl	locus	5039360	5039596	.	+	.	ID=RLOC_00014271;geneIDs=comp136525_c0_seq1.path1;transcripts=comp136525_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5039360	5039596	.	+	.	ID=comp136525_c0_seq1.mrna1;geneID=comp136525_c0_seq1.path1;Name=comp136525_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=236;mismatches=1;indels=1;unknowns=0;Target=comp136525_c0_seq1 238 1 .;CDS_Target=comp136525_c0_seq1 34 2 .;locus=RLOC_00014271
Chr2	stalkie_big_nohaplotig	exon	5039360	5039596	99	+	.	Parent=comp136525_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5039361	5039392	.	+	0	Parent=comp136525_c0_seq1.mrna1
Chr2	gffcl	locus	5040276	5042247	.	-	.	ID=RLOC_00014272;geneIDs=ORF391.path1;transcripts=ORF391.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5040276	5042247	.	-	.	ID=ORF391.mrna1;geneID=ORF391.path1;Name=ORF391;Dir=sensecoverage=100.0;identity=99.5;matches=1899;mismatches=9;indels=0;unknowns=0;locus=RLOC_00014272
Chr2	stalkie_big_nohaplotig	exon	5040276	5042047	99	-	.	Parent=ORF391.mrna1;Target=ORF391 137 1908 +
Chr2	stalkie_big_nohaplotig	exon	5042112	5042247	100	-	.	Parent=ORF391.mrna1;Target=ORF391 1 136 +
Chr2	stalkie_big_nohaplotig	CDS	5040276	5042047	.	-	2	Parent=ORF391.mrna1;Target=ORF391 137 1908 +
Chr2	stalkie_big_nohaplotig	CDS	5042112	5042247	.	-	0	Parent=ORF391.mrna1;Target=ORF391 1 136 +
Chr2	gffcl	locus	5043192	5044737	.	+	.	ID=RLOC_00014273;geneIDs=comp151449_c0_seq1.path1;transcripts=comp151449_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5043192	5044737	.	+	.	ID=comp151449_c0_seq1.mrna1;geneID=comp151449_c0_seq1.path1;Name=comp151449_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1544;mismatches=2;indels=2;unknowns=0;Target=comp151449_c0_seq1 1548 1 .;CDS_Target=comp151449_c0_seq1 430 365 .;locus=RLOC_00014273
Chr2	stalkie_big_nohaplotig	exon	5043192	5044737	99	+	.	Parent=comp151449_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5043556	5043619	.	+	0	Parent=comp151449_c0_seq1.mrna1
Chr2	gffcl	locus	5046867	5048911	.	-	.	ID=RLOC_00014274;geneIDs=ORF2939.path1;transcripts=ORF2939.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5046867	5048911	.	-	.	ID=ORF2939.mrna1;geneID=ORF2939.path1;Name=ORF2939;Dir=sensecoverage=100.0;identity=99.9;matches=785;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014274
Chr2	stalkie_big_nohaplotig	exon	5046867	5047349	100	-	.	Parent=ORF2939.mrna1;Target=ORF2939 304 786 +
Chr2	stalkie_big_nohaplotig	exon	5047412	5047470	100	-	.	Parent=ORF2939.mrna1;Target=ORF2939 245 303 +
Chr2	stalkie_big_nohaplotig	exon	5048546	5048774	99	-	.	Parent=ORF2939.mrna1;Target=ORF2939 16 244 +
Chr2	stalkie_big_nohaplotig	exon	5048897	5048911	100	-	.	Parent=ORF2939.mrna1;Target=ORF2939 1 15 +
Chr2	stalkie_big_nohaplotig	CDS	5046867	5047349	.	-	0	Parent=ORF2939.mrna1;Target=ORF2939 304 786 +
Chr2	stalkie_big_nohaplotig	CDS	5047412	5047470	.	-	2	Parent=ORF2939.mrna1;Target=ORF2939 245 303 +
Chr2	stalkie_big_nohaplotig	CDS	5048546	5048774	.	-	0	Parent=ORF2939.mrna1;Target=ORF2939 16 244 +
Chr2	stalkie_big_nohaplotig	CDS	5048897	5048911	.	-	0	Parent=ORF2939.mrna1;Target=ORF2939 1 15 +
Chr2	gffcl	locus	5051690	5058741	.	-	.	ID=RLOC_00014275;geneIDs=FBgn0033846.1.path1;transcripts=FBgn0033846.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5051690	5058741	.	-	.	ID=FBgn0033846.1.mrna1;geneID=FBgn0033846.1.path1;Name=FBgn0033846.1;Dir=sensecoverage=100.0;identity=99.8;matches=3255;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014275
Chr2	stalkie_big_nohaplotig	exon	5051690	5052099	100	-	.	Parent=FBgn0033846.1.mrna1;Target=FBgn0033846.1 2852 3261 +
Chr2	stalkie_big_nohaplotig	exon	5052185	5052327	100	-	.	Parent=FBgn0033846.1.mrna1;Target=FBgn0033846.1 2709 2851 +
Chr2	stalkie_big_nohaplotig	exon	5052398	5053251	99	-	.	Parent=FBgn0033846.1.mrna1;Target=FBgn0033846.1 1855 2708 +
Chr2	stalkie_big_nohaplotig	exon	5053411	5055233	99	-	.	Parent=FBgn0033846.1.mrna1;Target=FBgn0033846.1 32 1854 +
Chr2	stalkie_big_nohaplotig	exon	5058711	5058741	100	-	.	Parent=FBgn0033846.1.mrna1;Target=FBgn0033846.1 1 31 +
Chr2	stalkie_big_nohaplotig	CDS	5051690	5052099	.	-	2	Parent=FBgn0033846.1.mrna1;Target=FBgn0033846.1 2852 3261 +
Chr2	stalkie_big_nohaplotig	CDS	5052185	5052327	.	-	1	Parent=FBgn0033846.1.mrna1;Target=FBgn0033846.1 2709 2851 +
Chr2	stalkie_big_nohaplotig	CDS	5052398	5053251	.	-	0	Parent=FBgn0033846.1.mrna1;Target=FBgn0033846.1 1855 2708 +
Chr2	stalkie_big_nohaplotig	CDS	5053411	5055233	.	-	2	Parent=FBgn0033846.1.mrna1;Target=FBgn0033846.1 32 1854 +
Chr2	stalkie_big_nohaplotig	CDS	5058711	5058741	.	-	0	Parent=FBgn0033846.1.mrna1;Target=FBgn0033846.1 1 31 +
Chr2	gffcl	locus	5056243	5057739	.	-	.	ID=RLOC_00014276;geneIDs=FBgn0024556.1.path1;transcripts=FBgn0024556.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5056243	5057739	.	-	.	ID=FBgn0024556.1.mrna1;geneID=FBgn0024556.1.path1;Name=FBgn0024556.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1494;mismatches=3;indels=0;unknowns=0;Target=FBgn0024556.1 1497 1 .;locus=RLOC_00014276
Chr2	stalkie_big_nohaplotig	exon	5056243	5057739	99	-	.	Parent=FBgn0024556.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5056243	5057739	.	-	0	Parent=FBgn0024556.1.mrna1
Chr2	gffcl	locus	5062011	5066351	.	-	.	ID=RLOC_00014277;geneIDs=FBgn0033845.1.path1;transcripts=FBgn0033845.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5062011	5066351	.	-	.	ID=FBgn0033845.1.mrna1;geneID=FBgn0033845.1.path1;Name=FBgn0033845.1;Dir=sensecoverage=100.0;identity=99.5;matches=3273;mismatches=15;indels=0;unknowns=0;locus=RLOC_00014277
Chr2	stalkie_big_nohaplotig	exon	5062011	5062081	100	-	.	Parent=FBgn0033845.1.mrna1;Target=FBgn0033845.1 3218 3288 +
Chr2	stalkie_big_nohaplotig	exon	5062140	5062983	99	-	.	Parent=FBgn0033845.1.mrna1;Target=FBgn0033845.1 2374 3217 +
Chr2	stalkie_big_nohaplotig	exon	5063923	5064485	99	-	.	Parent=FBgn0033845.1.mrna1;Target=FBgn0033845.1 1811 2373 +
Chr2	stalkie_big_nohaplotig	exon	5064542	5066351	99	-	.	Parent=FBgn0033845.1.mrna1;Target=FBgn0033845.1 1 1810 +
Chr2	stalkie_big_nohaplotig	CDS	5062011	5062081	.	-	2	Parent=FBgn0033845.1.mrna1;Target=FBgn0033845.1 3218 3288 +
Chr2	stalkie_big_nohaplotig	CDS	5062140	5062983	.	-	0	Parent=FBgn0033845.1.mrna1;Target=FBgn0033845.1 2374 3217 +
Chr2	stalkie_big_nohaplotig	CDS	5063923	5064485	.	-	2	Parent=FBgn0033845.1.mrna1;Target=FBgn0033845.1 1811 2373 +
Chr2	stalkie_big_nohaplotig	CDS	5064542	5066351	.	-	0	Parent=FBgn0033845.1.mrna1;Target=FBgn0033845.1 1 1810 +
Chr2	gffcl	locus	5070127	5073326	.	+	.	ID=RLOC_00014278;geneIDs=FBgn0033486.1.path1;transcripts=FBgn0033486.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5070127	5073326	.	+	.	ID=FBgn0033486.1.mrna1;geneID=FBgn0033486.1.path1;Name=FBgn0033486.1;Dir=sensecoverage=100.0;identity=99.8;matches=1950;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014278
Chr2	stalkie_big_nohaplotig	exon	5070127	5070534	100	+	.	Parent=FBgn0033486.1.mrna1;Target=FBgn0033486.1 1 408 +
Chr2	stalkie_big_nohaplotig	exon	5071476	5071920	100	+	.	Parent=FBgn0033486.1.mrna1;Target=FBgn0033486.1 409 853 +
Chr2	stalkie_big_nohaplotig	exon	5071986	5072302	99	+	.	Parent=FBgn0033486.1.mrna1;Target=FBgn0033486.1 854 1170 +
Chr2	stalkie_big_nohaplotig	exon	5072486	5072852	99	+	.	Parent=FBgn0033486.1.mrna1;Target=FBgn0033486.1 1171 1537 +
Chr2	stalkie_big_nohaplotig	exon	5072911	5073326	99	+	.	Parent=FBgn0033486.1.mrna1;Target=FBgn0033486.1 1538 1953 +
Chr2	stalkie_big_nohaplotig	CDS	5070127	5070534	.	+	0	Parent=FBgn0033486.1.mrna1;Target=FBgn0033486.1 1 408 +
Chr2	stalkie_big_nohaplotig	CDS	5071476	5071920	.	+	0	Parent=FBgn0033486.1.mrna1;Target=FBgn0033486.1 409 853 +
Chr2	stalkie_big_nohaplotig	CDS	5071986	5072302	.	+	2	Parent=FBgn0033486.1.mrna1;Target=FBgn0033486.1 854 1170 +
Chr2	stalkie_big_nohaplotig	CDS	5072486	5072852	.	+	0	Parent=FBgn0033486.1.mrna1;Target=FBgn0033486.1 1171 1537 +
Chr2	stalkie_big_nohaplotig	CDS	5072911	5073326	.	+	2	Parent=FBgn0033486.1.mrna1;Target=FBgn0033486.1 1538 1953 +
Chr2	gffcl	locus	5074363	5075295	.	-	.	ID=RLOC_00014279;geneIDs=comp148210_c0_seq1.path1;transcripts=comp148210_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5074363	5075295	.	-	.	ID=comp148210_c0_seq1.mrna1;geneID=comp148210_c0_seq1.path1;Name=comp148210_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=933;mismatches=0;indels=0;unknowns=0;Target=comp148210_c0_seq1 933 1 .;CDS_Target=comp148210_c0_seq1 789 685 .;locus=RLOC_00014279
Chr2	stalkie_big_nohaplotig	exon	5074363	5075295	100	-	.	Parent=comp148210_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5074507	5074611	.	-	0	Parent=comp148210_c0_seq1.mrna1
Chr2	gffcl	locus	5076850	5079453	.	+	.	ID=RLOC_00014280;geneIDs=FBgn0034182.1.path1;transcripts=FBgn0034182.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5076850	5079453	.	+	.	ID=FBgn0034182.1.mrna1;geneID=FBgn0034182.1.path1;Name=FBgn0034182.1;Dir=sensecoverage=100.0;identity=98.9;matches=1403;mismatches=15;indels=1;unknowns=0;locus=RLOC_00014280
Chr2	stalkie_big_nohaplotig	exon	5076850	5076902	100	+	.	Parent=FBgn0034182.1.mrna1;Target=FBgn0034182.1 1 53 +
Chr2	stalkie_big_nohaplotig	exon	5076967	5077101	100	+	.	Parent=FBgn0034182.1.mrna1;Target=FBgn0034182.1 54 188 +
Chr2	stalkie_big_nohaplotig	exon	5077209	5077758	99	+	.	Parent=FBgn0034182.1.mrna1;Target=FBgn0034182.1 189 738 +
Chr2	stalkie_big_nohaplotig	exon	5078704	5079249	98	+	.	Parent=FBgn0034182.1.mrna1;Target=FBgn0034182.1 739 1284 +
Chr2	stalkie_big_nohaplotig	exon	5079320	5079453	97	+	.	Parent=FBgn0034182.1.mrna1;Target=FBgn0034182.1 1285 1419 +
Chr2	stalkie_big_nohaplotig	CDS	5076850	5076902	.	+	0	Parent=FBgn0034182.1.mrna1;Target=FBgn0034182.1 1 53 +
Chr2	stalkie_big_nohaplotig	CDS	5076967	5077101	.	+	1	Parent=FBgn0034182.1.mrna1;Target=FBgn0034182.1 54 188 +
Chr2	stalkie_big_nohaplotig	CDS	5077209	5077758	.	+	1	Parent=FBgn0034182.1.mrna1;Target=FBgn0034182.1 189 738 +
Chr2	stalkie_big_nohaplotig	CDS	5078704	5079249	.	+	0	Parent=FBgn0034182.1.mrna1;Target=FBgn0034182.1 739 1284 +
Chr2	stalkie_big_nohaplotig	CDS	5079320	5079453	.	+	0	Parent=FBgn0034182.1.mrna1;Target=FBgn0034182.1 1285 1419 +
Chr2	gffcl	locus	5084756	5088560	.	+	.	ID=RLOC_00014281;geneIDs=FBgn0034183.1.path1;transcripts=FBgn0034183.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5084756	5088560	.	+	.	ID=FBgn0034183.1.mrna1;geneID=FBgn0034183.1.path1;Name=FBgn0034183.1;Dir=sensecoverage=100.0;identity=99.7;matches=1516;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014281
Chr2	stalkie_big_nohaplotig	exon	5084756	5084874	100	+	.	Parent=FBgn0034183.1.mrna1;Target=FBgn0034183.1 1 119 +
Chr2	stalkie_big_nohaplotig	exon	5084946	5085074	100	+	.	Parent=FBgn0034183.1.mrna1;Target=FBgn0034183.1 120 248 +
Chr2	stalkie_big_nohaplotig	exon	5086025	5086571	100	+	.	Parent=FBgn0034183.1.mrna1;Target=FBgn0034183.1 249 795 +
Chr2	stalkie_big_nohaplotig	exon	5086635	5087207	99	+	.	Parent=FBgn0034183.1.mrna1;Target=FBgn0034183.1 796 1368 +
Chr2	stalkie_big_nohaplotig	exon	5088408	5088560	99	+	.	Parent=FBgn0034183.1.mrna1;Target=FBgn0034183.1 1369 1521 +
Chr2	stalkie_big_nohaplotig	CDS	5084756	5084874	.	+	0	Parent=FBgn0034183.1.mrna1;Target=FBgn0034183.1 1 119 +
Chr2	stalkie_big_nohaplotig	CDS	5084946	5085074	.	+	1	Parent=FBgn0034183.1.mrna1;Target=FBgn0034183.1 120 248 +
Chr2	stalkie_big_nohaplotig	CDS	5086025	5086571	.	+	1	Parent=FBgn0034183.1.mrna1;Target=FBgn0034183.1 249 795 +
Chr2	stalkie_big_nohaplotig	CDS	5086635	5087207	.	+	0	Parent=FBgn0034183.1.mrna1;Target=FBgn0034183.1 796 1368 +
Chr2	stalkie_big_nohaplotig	CDS	5088408	5088560	.	+	0	Parent=FBgn0034183.1.mrna1;Target=FBgn0034183.1 1369 1521 +
Chr2	gffcl	locus	5088651	5089807	.	-	.	ID=RLOC_00014282;geneIDs=FBgn0034705.1.path1;transcripts=FBgn0034705.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5088651	5089807	.	-	.	ID=FBgn0034705.1.mrna1;geneID=FBgn0034705.1.path1;Name=FBgn0034705.1;Dir=indeterminatecoverage=98.4;identity=99.1;matches=1147;mismatches=10;indels=0;unknowns=0;Target=FBgn0034705.1 1176 20 .;CDS_Target=FBgn0034705.1 1176 22 .;locus=RLOC_00014282
Chr2	stalkie_big_nohaplotig	exon	5088651	5089807	99	-	.	Parent=FBgn0034705.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5088651	5089805	.	-	0	Parent=FBgn0034705.1.mrna1
Chr2	gffcl	locus	5095229	5100834	.	+	.	ID=RLOC_00014283;geneIDs=FBgn0034706.1.path1;transcripts=FBgn0034706.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5095229	5100834	.	+	.	ID=FBgn0034706.1.mrna1;geneID=FBgn0034706.1.path1;Name=FBgn0034706.1;Dir=sensecoverage=100.0;identity=99.9;matches=1370;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014283
Chr2	stalkie_big_nohaplotig	exon	5095229	5095249	100	+	.	Parent=FBgn0034706.1.mrna1;Target=FBgn0034706.1 1 21 +
Chr2	stalkie_big_nohaplotig	exon	5099485	5100834	99	+	.	Parent=FBgn0034706.1.mrna1;Target=FBgn0034706.1 22 1371 +
Chr2	stalkie_big_nohaplotig	CDS	5095229	5095249	.	+	0	Parent=FBgn0034706.1.mrna1;Target=FBgn0034706.1 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	5099485	5100834	.	+	0	Parent=FBgn0034706.1.mrna1;Target=FBgn0034706.1 22 1371 +
Chr2	gffcl	locus	5103816	5107964	.	+	.	ID=RLOC_00014284;geneIDs=FBgn0034433.1.path1;transcripts=FBgn0034433.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5103816	5107964	.	+	.	ID=FBgn0034433.1.mrna1;geneID=FBgn0034433.1.path1;Name=FBgn0034433.1;Dir=sensecoverage=100.0;identity=99.8;matches=1099;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014284
Chr2	stalkie_big_nohaplotig	exon	5103816	5103911	100	+	.	Parent=FBgn0034433.1.mrna1;Target=FBgn0034433.1 1 96 +
Chr2	stalkie_big_nohaplotig	exon	5104069	5104502	100	+	.	Parent=FBgn0034433.1.mrna1;Target=FBgn0034433.1 97 530 +
Chr2	stalkie_big_nohaplotig	exon	5104565	5104628	100	+	.	Parent=FBgn0034433.1.mrna1;Target=FBgn0034433.1 531 594 +
Chr2	stalkie_big_nohaplotig	exon	5105100	5105290	99	+	.	Parent=FBgn0034433.1.mrna1;Target=FBgn0034433.1 595 785 +
Chr2	stalkie_big_nohaplotig	exon	5107585	5107768	100	+	.	Parent=FBgn0034433.1.mrna1;Target=FBgn0034433.1 786 969 +
Chr2	stalkie_big_nohaplotig	exon	5107833	5107964	99	+	.	Parent=FBgn0034433.1.mrna1;Target=FBgn0034433.1 970 1101 +
Chr2	stalkie_big_nohaplotig	CDS	5103816	5103911	.	+	0	Parent=FBgn0034433.1.mrna1;Target=FBgn0034433.1 1 96 +
Chr2	stalkie_big_nohaplotig	CDS	5104069	5104502	.	+	0	Parent=FBgn0034433.1.mrna1;Target=FBgn0034433.1 97 530 +
Chr2	stalkie_big_nohaplotig	CDS	5104565	5104628	.	+	1	Parent=FBgn0034433.1.mrna1;Target=FBgn0034433.1 531 594 +
Chr2	stalkie_big_nohaplotig	CDS	5105100	5105290	.	+	0	Parent=FBgn0034433.1.mrna1;Target=FBgn0034433.1 595 785 +
Chr2	stalkie_big_nohaplotig	CDS	5107585	5107768	.	+	1	Parent=FBgn0034433.1.mrna1;Target=FBgn0034433.1 786 969 +
Chr2	stalkie_big_nohaplotig	CDS	5107833	5107964	.	+	0	Parent=FBgn0034433.1.mrna1;Target=FBgn0034433.1 970 1101 +
Chr2	gffcl	locus	5106356	5107033	.	+	.	ID=RLOC_00014285;geneIDs=comp160499_c0_seq1.path1;transcripts=comp160499_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5106356	5107033	.	+	.	ID=comp160499_c0_seq1.mrna1;geneID=comp160499_c0_seq1.path1;Name=comp160499_c0_seq1;Dir=indeterminatecoverage=99.7;identity=94.8;matches=652;mismatches=18;indels=18;unknowns=0;Target=comp160499_c0_seq1 680 1 .;CDS_Target=comp160499_c0_seq1 517 395 .;locus=RLOC_00014285
Chr2	stalkie_big_nohaplotig	exon	5106356	5107033	94	+	.	Parent=comp160499_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5106750	5106872	.	+	0	Parent=comp160499_c0_seq1.mrna1
Chr2	gffcl	locus	5110009	6675783	.	+	.	ID=RLOC_00014286;geneIDs=comp106488_c0_seq1.path1,comp156422_c0_seq1.path1;transcripts=comp156422_c0_seq1.mrna1,comp106488_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5110009	6675783	.	+	.	ID=comp156422_c0_seq1.mrna1;geneID=comp156422_c0_seq1.path1;Name=comp156422_c0_seq1;Dir=indeterminatecoverage=95.2;identity=99.4;matches=1232;mismatches=6;indels=1;unknowns=0;Target=comp156422_c0_seq1 434 267 .;locus=RLOC_00014286
Chr2	stalkie_big_nohaplotig	exon	5110009	5111236	99	+	.	Parent=comp156422_c0_seq1.mrna1;Target=comp156422_c0_seq1 1243 15 .
Chr2	stalkie_big_nohaplotig	exon	6675774	6675783	100	+	.	Parent=comp156422_c0_seq1.mrna1;Target=comp156422_c0_seq1 1253 1244 .
Chr2	stalkie_big_nohaplotig	CDS	5110261	5110428	.	+	0	Parent=comp156422_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5111236	5111500	.	+	.	ID=comp106488_c0_seq1.mrna1;geneID=comp106488_c0_seq1.path1;Name=comp106488_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=265;mismatches=0;indels=0;unknowns=0;Target=comp106488_c0_seq1 265 1 .;CDS_Target=comp106488_c0_seq1 121 2 .;locus=RLOC_00014286
Chr2	stalkie_big_nohaplotig	exon	5111236	5111500	100	+	.	Parent=comp106488_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5111237	5111356	.	+	0	Parent=comp106488_c0_seq1.mrna1
Chr2	gffcl	locus	5119995	5124850	.	+	.	ID=RLOC_00014288;geneIDs=comp163326_c0_seq1.path1;transcripts=comp163326_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5119995	5124850	.	+	.	ID=comp163326_c0_seq1.mrna1;geneID=comp163326_c0_seq1.path1;Name=comp163326_c0_seq1;Dir=sensecoverage=100.0;identity=96.8;matches=2767;mismatches=35;indels=55;unknowns=0;locus=RLOC_00014288
Chr2	stalkie_big_nohaplotig	exon	5119995	5120241	97	+	.	Parent=comp163326_c0_seq1.mrna1;Target=comp163326_c0_seq1 1 247 +
Chr2	stalkie_big_nohaplotig	exon	5121536	5122006	98	+	.	Parent=comp163326_c0_seq1.mrna1;Target=comp163326_c0_seq1 248 717 +
Chr2	stalkie_big_nohaplotig	exon	5122076	5122740	98	+	.	Parent=comp163326_c0_seq1.mrna1;Target=comp163326_c0_seq1 718 1382 +
Chr2	stalkie_big_nohaplotig	exon	5122901	5123616	99	+	.	Parent=comp163326_c0_seq1.mrna1;Target=comp163326_c0_seq1 1383 2098 +
Chr2	stalkie_big_nohaplotig	exon	5124147	5124850	91	+	.	Parent=comp163326_c0_seq1.mrna1;Target=comp163326_c0_seq1 2099 2856 +
Chr2	stalkie_big_nohaplotig	CDS	5122260	5122740	.	+	0	Parent=comp163326_c0_seq1.mrna1;Target=comp163326_c0_seq1 902 1382 +
Chr2	stalkie_big_nohaplotig	CDS	5122901	5123616	.	+	2	Parent=comp163326_c0_seq1.mrna1;Target=comp163326_c0_seq1 1383 2098 +
Chr2	stalkie_big_nohaplotig	CDS	5124147	5124200	.	+	0	Parent=comp163326_c0_seq1.mrna1;Target=comp163326_c0_seq1 2099 2152 +
Chr2	gffcl	locus	5125867	5136266	.	-	.	ID=RLOC_00014289;geneIDs=FBgn0259678.1.path1;transcripts=FBgn0259678.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5125867	5136266	.	-	.	ID=FBgn0259678.1.mrna1;geneID=FBgn0259678.1.path1;Name=FBgn0259678.1;Dir=sensecoverage=94.3;identity=99.6;matches=2392;mismatches=10;indels=0;unknowns=0;locus=RLOC_00014289
Chr2	stalkie_big_nohaplotig	exon	5125867	5127053	99	-	.	Parent=FBgn0259678.1.mrna1;Target=FBgn0259678.1 1361 2547 +
Chr2	stalkie_big_nohaplotig	exon	5129676	5129844	99	-	.	Parent=FBgn0259678.1.mrna1;Target=FBgn0259678.1 1192 1360 +
Chr2	stalkie_big_nohaplotig	exon	5132509	5132764	100	-	.	Parent=FBgn0259678.1.mrna1;Target=FBgn0259678.1 936 1191 +
Chr2	stalkie_big_nohaplotig	exon	5133269	5133421	100	-	.	Parent=FBgn0259678.1.mrna1;Target=FBgn0259678.1 783 935 +
Chr2	stalkie_big_nohaplotig	exon	5134107	5134210	100	-	.	Parent=FBgn0259678.1.mrna1;Target=FBgn0259678.1 679 782 +
Chr2	stalkie_big_nohaplotig	exon	5134658	5134895	99	-	.	Parent=FBgn0259678.1.mrna1;Target=FBgn0259678.1 441 678 +
Chr2	stalkie_big_nohaplotig	exon	5135895	5136098	100	-	.	Parent=FBgn0259678.1.mrna1;Target=FBgn0259678.1 237 440 +
Chr2	stalkie_big_nohaplotig	exon	5136176	5136266	98	-	.	Parent=FBgn0259678.1.mrna1;Target=FBgn0259678.1 146 236 +
Chr2	stalkie_big_nohaplotig	CDS	5125867	5127053	.	-	2	Parent=FBgn0259678.1.mrna1;Target=FBgn0259678.1 1361 2547 +
Chr2	stalkie_big_nohaplotig	CDS	5129676	5129844	.	-	0	Parent=FBgn0259678.1.mrna1;Target=FBgn0259678.1 1192 1360 +
Chr2	stalkie_big_nohaplotig	CDS	5132509	5132764	.	-	1	Parent=FBgn0259678.1.mrna1;Target=FBgn0259678.1 936 1191 +
Chr2	stalkie_big_nohaplotig	CDS	5133269	5133421	.	-	1	Parent=FBgn0259678.1.mrna1;Target=FBgn0259678.1 783 935 +
Chr2	stalkie_big_nohaplotig	CDS	5134107	5134210	.	-	0	Parent=FBgn0259678.1.mrna1;Target=FBgn0259678.1 679 782 +
Chr2	stalkie_big_nohaplotig	CDS	5134658	5134895	.	-	1	Parent=FBgn0259678.1.mrna1;Target=FBgn0259678.1 441 678 +
Chr2	stalkie_big_nohaplotig	CDS	5135895	5136098	.	-	1	Parent=FBgn0259678.1.mrna1;Target=FBgn0259678.1 237 440 +
Chr2	stalkie_big_nohaplotig	CDS	5136176	5136264	.	-	0	Parent=FBgn0259678.1.mrna1;Target=FBgn0259678.1 148 236 +
Chr2	gffcl	locus	5161567	5174159	.	-	.	ID=RLOC_00014290;geneIDs=comp154492_c0_seq1.path1;transcripts=comp154492_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5161567	5174159	.	-	.	ID=comp154492_c0_seq1.mrna1;geneID=comp154492_c0_seq1.path1;Name=comp154492_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=1092;mismatches=2;indels=2;unknowns=0;Target=comp154492_c0_seq1 723 773 +;locus=RLOC_00014290
Chr2	stalkie_big_nohaplotig	exon	5161567	5162188	99	-	.	Parent=comp154492_c0_seq1.mrna1;Target=comp154492_c0_seq1 475 1094 +
Chr2	stalkie_big_nohaplotig	exon	5173686	5174159	100	-	.	Parent=comp154492_c0_seq1.mrna1;Target=comp154492_c0_seq1 1 474 +
Chr2	stalkie_big_nohaplotig	CDS	5161890	5161940	.	-	0	Parent=comp154492_c0_seq1.mrna1
Chr2	gffcl	locus	5188720	5203200	.	+	.	ID=RLOC_00014291;geneIDs=FBgn0005614.1.path1,comp144927_c0_seq1.path1,comp163112_c1_seq1.path1,comp1297560_c0_seq1.path1;transcripts=comp163112_c1_seq1.mrna1,FBgn0005614.1.mrna1,comp144927_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5188720	5203200	.	+	.	ID=comp163112_c1_seq1.mrna1;geneID=comp163112_c1_seq1.path1;Name=comp163112_c1_seq1;Dir=antisensecoverage=99.1;identity=99.7;matches=4324;mismatches=11;indels=1;unknowns=0;locus=RLOC_00014291
Chr2	stalkie_big_nohaplotig	exon	5188720	5188874	99	+	.	Parent=comp163112_c1_seq1.mrna1;Target=comp163112_c1_seq1 4202 4355 -
Chr2	stalkie_big_nohaplotig	exon	5190546	5190691	100	+	.	Parent=comp163112_c1_seq1.mrna1;Target=comp163112_c1_seq1 4056 4201 -
Chr2	stalkie_big_nohaplotig	exon	5195797	5196034	100	+	.	Parent=comp163112_c1_seq1.mrna1;Target=comp163112_c1_seq1 3818 4055 -
Chr2	stalkie_big_nohaplotig	exon	5197388	5197530	99	+	.	Parent=comp163112_c1_seq1.mrna1;Target=comp163112_c1_seq1 3675 3817 -
Chr2	stalkie_big_nohaplotig	exon	5197659	5197839	99	+	.	Parent=comp163112_c1_seq1.mrna1;Target=comp163112_c1_seq1 3494 3674 -
Chr2	stalkie_big_nohaplotig	exon	5197960	5198151	100	+	.	Parent=comp163112_c1_seq1.mrna1;Target=comp163112_c1_seq1 3302 3493 -
Chr2	stalkie_big_nohaplotig	exon	5198226	5198460	99	+	.	Parent=comp163112_c1_seq1.mrna1;Target=comp163112_c1_seq1 3067 3301 -
Chr2	stalkie_big_nohaplotig	exon	5199108	5199381	100	+	.	Parent=comp163112_c1_seq1.mrna1;Target=comp163112_c1_seq1 2793 3066 -
Chr2	stalkie_big_nohaplotig	exon	5199494	5199886	100	+	.	Parent=comp163112_c1_seq1.mrna1;Target=comp163112_c1_seq1 2400 2792 -
Chr2	stalkie_big_nohaplotig	exon	5200688	5201459	99	+	.	Parent=comp163112_c1_seq1.mrna1;Target=comp163112_c1_seq1 1628 2399 -
Chr2	stalkie_big_nohaplotig	exon	5201525	5201744	99	+	.	Parent=comp163112_c1_seq1.mrna1;Target=comp163112_c1_seq1 1408 1627 -
Chr2	stalkie_big_nohaplotig	exon	5201814	5203200	99	+	.	Parent=comp163112_c1_seq1.mrna1;Target=comp163112_c1_seq1 21 1407 -
Chr2	stalkie_big_nohaplotig	CDS	5188845	5188874	.	+	0	Parent=comp163112_c1_seq1.mrna1;Target=comp163112_c1_seq1 4202 4231 .
Chr2	stalkie_big_nohaplotig	CDS	5190546	5190691	.	+	0	Parent=comp163112_c1_seq1.mrna1;Target=comp163112_c1_seq1 4056 4201 .
Chr2	stalkie_big_nohaplotig	CDS	5195797	5196034	.	+	1	Parent=comp163112_c1_seq1.mrna1;Target=comp163112_c1_seq1 3818 4055 .
Chr2	stalkie_big_nohaplotig	CDS	5197388	5197530	.	+	0	Parent=comp163112_c1_seq1.mrna1;Target=comp163112_c1_seq1 3675 3817 .
Chr2	stalkie_big_nohaplotig	CDS	5197659	5197839	.	+	1	Parent=comp163112_c1_seq1.mrna1;Target=comp163112_c1_seq1 3494 3674 .
Chr2	stalkie_big_nohaplotig	CDS	5197960	5198151	.	+	0	Parent=comp163112_c1_seq1.mrna1;Target=comp163112_c1_seq1 3302 3493 .
Chr2	stalkie_big_nohaplotig	CDS	5198226	5198460	.	+	0	Parent=comp163112_c1_seq1.mrna1;Target=comp163112_c1_seq1 3067 3301 .
Chr2	stalkie_big_nohaplotig	CDS	5199108	5199381	.	+	2	Parent=comp163112_c1_seq1.mrna1;Target=comp163112_c1_seq1 2793 3066 .
Chr2	stalkie_big_nohaplotig	CDS	5199494	5199886	.	+	1	Parent=comp163112_c1_seq1.mrna1;Target=comp163112_c1_seq1 2400 2792 .
Chr2	stalkie_big_nohaplotig	CDS	5200688	5200913	.	+	1	Parent=comp163112_c1_seq1.mrna1;Target=comp163112_c1_seq1 2174 2399 .
Chr2	stalkie_big_nohaplotig	mRNA	5188833	5203069	.	+	.	ID=FBgn0005614.1.mrna1;geneID=FBgn0005614.1.path1;Name=FBgn0005614.1;Dir=sensecoverage=100.0;identity=99.7;matches=3590;mismatches=10;indels=0;unknowns=0;locus=RLOC_00014291
Chr2	stalkie_big_nohaplotig	exon	5188833	5188874	100	+	.	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 1 42 +
Chr2	stalkie_big_nohaplotig	exon	5190546	5190691	100	+	.	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 43 188 +
Chr2	stalkie_big_nohaplotig	exon	5195797	5196034	100	+	.	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 189 426 +
Chr2	stalkie_big_nohaplotig	exon	5197388	5197530	99	+	.	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 427 569 +
Chr2	stalkie_big_nohaplotig	exon	5197659	5197839	99	+	.	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 570 750 +
Chr2	stalkie_big_nohaplotig	exon	5197960	5198151	100	+	.	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 751 942 +
Chr2	stalkie_big_nohaplotig	exon	5198226	5198460	99	+	.	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 943 1177 +
Chr2	stalkie_big_nohaplotig	exon	5199108	5199381	100	+	.	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 1178 1451 +
Chr2	stalkie_big_nohaplotig	exon	5199494	5199886	100	+	.	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 1452 1844 +
Chr2	stalkie_big_nohaplotig	exon	5200688	5200883	100	+	.	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 1845 2040 +
Chr2	stalkie_big_nohaplotig	exon	5201295	5201459	99	+	.	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 2041 2205 +
Chr2	stalkie_big_nohaplotig	exon	5201525	5201744	99	+	.	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 2206 2425 +
Chr2	stalkie_big_nohaplotig	exon	5201814	5202150	100	+	.	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 2426 2762 +
Chr2	stalkie_big_nohaplotig	exon	5202232	5203069	99	+	.	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 2763 3600 +
Chr2	stalkie_big_nohaplotig	CDS	5188833	5188874	.	+	0	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 1 42 +
Chr2	stalkie_big_nohaplotig	CDS	5190546	5190691	.	+	0	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 43 188 +
Chr2	stalkie_big_nohaplotig	CDS	5195797	5196034	.	+	1	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 189 426 +
Chr2	stalkie_big_nohaplotig	CDS	5197388	5197530	.	+	0	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 427 569 +
Chr2	stalkie_big_nohaplotig	CDS	5197659	5197839	.	+	1	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 570 750 +
Chr2	stalkie_big_nohaplotig	CDS	5197960	5198151	.	+	0	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 751 942 +
Chr2	stalkie_big_nohaplotig	CDS	5198226	5198460	.	+	0	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 943 1177 +
Chr2	stalkie_big_nohaplotig	CDS	5199108	5199381	.	+	2	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 1178 1451 +
Chr2	stalkie_big_nohaplotig	CDS	5199494	5199886	.	+	1	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 1452 1844 +
Chr2	stalkie_big_nohaplotig	CDS	5200688	5200883	.	+	1	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 1845 2040 +
Chr2	stalkie_big_nohaplotig	CDS	5201295	5201459	.	+	0	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 2041 2205 +
Chr2	stalkie_big_nohaplotig	CDS	5201525	5201744	.	+	0	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 2206 2425 +
Chr2	stalkie_big_nohaplotig	CDS	5201814	5202150	.	+	2	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 2426 2762 +
Chr2	stalkie_big_nohaplotig	CDS	5202232	5203069	.	+	1	Parent=FBgn0005614.1.mrna1;Target=FBgn0005614.1 2763 3600 +
Chr2	stalkie_big_nohaplotig	mRNA	5200393	5200711	.	+	.	ID=comp144927_c0_seq1.mrna1;geneID=comp144927_c0_seq1.path1;Name=comp144927_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=317;mismatches=2;indels=0;unknowns=0;Target=comp144927_c0_seq1 319 1 .;CDS_Target=comp144927_c0_seq1 232 155 .;locus=RLOC_00014291
Chr2	stalkie_big_nohaplotig	exon	5200393	5200711	99	+	.	Parent=comp144927_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5200547	5200624	.	+	0	Parent=comp144927_c0_seq1.mrna1
Chr2	gffcl	locus	5209689	5210338	.	-	.	ID=RLOC_00014292;geneIDs=comp156726_c1_seq1.path1;transcripts=comp156726_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5209689	5210338	.	-	.	ID=comp156726_c1_seq1.mrna1;geneID=comp156726_c1_seq1.path1;Name=comp156726_c1_seq1;Dir=indeterminatecoverage=95.3;identity=92.2;matches=599;mismatches=13;indels=38;unknowns=0;Target=comp156726_c1_seq1 642 31 .;CDS_Target=comp156726_c1_seq1 192 118 .;locus=RLOC_00014292
Chr2	stalkie_big_nohaplotig	exon	5209689	5210338	92	-	.	Parent=comp156726_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5210174	5210248	.	-	0	Parent=comp156726_c1_seq1.mrna1
Chr2	gffcl	locus	5210943	5224116	.	-	.	ID=RLOC_00014293;geneIDs=FBgn0027589.1.path1;transcripts=FBgn0027589.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5210943	5224116	.	-	.	ID=FBgn0027589.1.mrna1;geneID=FBgn0027589.1.path1;Name=FBgn0027589.1;Dir=sensecoverage=100.0;identity=99.5;matches=1708;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014293
Chr2	stalkie_big_nohaplotig	exon	5210943	5211675	99	-	.	Parent=FBgn0027589.1.mrna1;Target=FBgn0027589.1 984 1716 +
Chr2	stalkie_big_nohaplotig	exon	5217713	5217971	100	-	.	Parent=FBgn0027589.1.mrna1;Target=FBgn0027589.1 725 983 +
Chr2	stalkie_big_nohaplotig	exon	5223393	5224116	99	-	.	Parent=FBgn0027589.1.mrna1;Target=FBgn0027589.1 1 724 +
Chr2	stalkie_big_nohaplotig	CDS	5210943	5211675	.	-	1	Parent=FBgn0027589.1.mrna1;Target=FBgn0027589.1 984 1716 +
Chr2	stalkie_big_nohaplotig	CDS	5217713	5217971	.	-	2	Parent=FBgn0027589.1.mrna1;Target=FBgn0027589.1 725 983 +
Chr2	stalkie_big_nohaplotig	CDS	5223393	5224116	.	-	0	Parent=FBgn0027589.1.mrna1;Target=FBgn0027589.1 1 724 +
Chr2	gffcl	locus	5220701	5221698	.	-	.	ID=RLOC_00014294;geneIDs=comp150682_c0_seq1.path1;transcripts=comp150682_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5220701	5221698	.	-	.	ID=comp150682_c0_seq1.mrna1;geneID=comp150682_c0_seq1.path1;Name=comp150682_c0_seq1;Dir=indeterminatecoverage=99.4;identity=96.6;matches=984;mismatches=14;indels=21;unknowns=0;Target=comp150682_c0_seq1 1019 1 .;CDS_Target=comp150682_c0_seq1 889 722 .;locus=RLOC_00014294
Chr2	stalkie_big_nohaplotig	exon	5220701	5221698	96	-	.	Parent=comp150682_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5220831	5220998	.	-	0	Parent=comp150682_c0_seq1.mrna1
Chr2	gffcl	locus	5267833	5269414	.	-	.	ID=RLOC_00014295;geneIDs=FBgn0039519.1.path1;transcripts=FBgn0039519.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5267833	5269414	.	-	.	ID=FBgn0039519.1.mrna1;geneID=FBgn0039519.1.path1;Name=FBgn0039519.1;Dir=sensecoverage=100.0;identity=95.8;matches=1450;mismatches=54;indels=10;unknowns=0;locus=RLOC_00014295
Chr2	stalkie_big_nohaplotig	exon	5267833	5268245	97	-	.	Parent=FBgn0039519.1.mrna1;Target=FBgn0039519.1 1097 1509 +
Chr2	stalkie_big_nohaplotig	exon	5268319	5269414	95	-	.	Parent=FBgn0039519.1.mrna1;Target=FBgn0039519.1 1 1096 +
Chr2	stalkie_big_nohaplotig	CDS	5267833	5268245	.	-	2	Parent=FBgn0039519.1.mrna1;Target=FBgn0039519.1 1097 1509 +
Chr2	stalkie_big_nohaplotig	CDS	5268319	5269414	.	-	0	Parent=FBgn0039519.1.mrna1;Target=FBgn0039519.1 1 1096 +
Chr2	gffcl	locus	5287743	5288296	.	-	.	ID=RLOC_00014296;geneIDs=comp136767_c3_seq1.path1;transcripts=comp136767_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5287743	5288296	.	-	.	ID=comp136767_c3_seq1.mrna1;geneID=comp136767_c3_seq1.path1;Name=comp136767_c3_seq1;Dir=indeterminatecoverage=92.9;identity=98.0;matches=543;mismatches=10;indels=1;unknowns=0;Target=comp136767_c3_seq1 553 1 .;CDS_Target=comp136767_c3_seq1 18 1 .;locus=RLOC_00014296
Chr2	stalkie_big_nohaplotig	exon	5287743	5288296	98	-	.	Parent=comp136767_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5288279	5288296	.	-	0	Parent=comp136767_c3_seq1.mrna1
Chr2	gffcl	locus	5307942	5308656	.	-	.	ID=RLOC_00014297;geneIDs=comp161061_c1_seq1.path1;transcripts=comp161061_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5307942	5308656	.	-	.	ID=comp161061_c1_seq1.mrna1;geneID=comp161061_c1_seq1.path1;Name=comp161061_c1_seq1;Dir=indeterminatecoverage=24.1;identity=99.7;matches=713;mismatches=1;indels=1;unknowns=0;Target=comp161061_c1_seq1 2961 2248 .;CDS_Target=comp161061_c1_seq1 2539 2249 .;locus=RLOC_00014297
Chr2	stalkie_big_nohaplotig	exon	5307942	5308656	99	-	.	Parent=comp161061_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5308365	5308655	.	-	0	Parent=comp161061_c1_seq1.mrna1
Chr2	gffcl	locus	5317124	5319567	.	-	.	ID=RLOC_00014298;geneIDs=FBgn0010100.2.path1;transcripts=FBgn0010100.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5317124	5319567	.	-	.	ID=FBgn0010100.2.mrna1;geneID=FBgn0010100.2.path1;Name=FBgn0010100.2;Dir=indeterminatecoverage=98.7;identity=99.8;matches=2440;mismatches=4;indels=0;unknowns=0;Target=FBgn0010100.2 2475 32 .;CDS_Target=FBgn0010100.2 2475 34 .;locus=RLOC_00014298
Chr2	stalkie_big_nohaplotig	exon	5317124	5319567	99	-	.	Parent=FBgn0010100.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5317124	5319565	.	-	0	Parent=FBgn0010100.2.mrna1
Chr2	gffcl	locus	5325631	5326005	.	+	.	ID=RLOC_00014299;geneIDs=comp142571_c0_seq1.path1;transcripts=comp142571_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5325631	5326005	.	+	.	ID=comp142571_c0_seq1.mrna1;geneID=comp142571_c0_seq1.path1;Name=comp142571_c0_seq1;Dir=indeterminatecoverage=97.2;identity=96.0;matches=362;mismatches=12;indels=3;unknowns=0;Target=comp142571_c0_seq1 387 12 .;CDS_Target=comp142571_c0_seq1 81 13 .;locus=RLOC_00014299
Chr2	stalkie_big_nohaplotig	exon	5325631	5326005	96	+	.	Parent=comp142571_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5325632	5325701	.	+	0	Parent=comp142571_c0_seq1.mrna1
Chr2	gffcl	locus	5420803	5421526	.	-	.	ID=RLOC_00014301;geneIDs=comp154309_c0_seq1.path1;transcripts=comp154309_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5420803	5421526	.	-	.	ID=comp154309_c0_seq1.mrna1;geneID=comp154309_c0_seq1.path1;Name=comp154309_c0_seq1;Dir=indeterminatecoverage=97.6;identity=99.4;matches=720;mismatches=4;indels=0;unknowns=0;Target=comp154309_c0_seq1 742 19 .;CDS_Target=comp154309_c0_seq1 549 19 .;locus=RLOC_00014301
Chr2	stalkie_big_nohaplotig	exon	5420803	5421526	99	-	.	Parent=comp154309_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5420996	5421526	.	-	0	Parent=comp154309_c0_seq1.mrna1
Chr2	gffcl	locus	5421628	5422531	.	-	.	ID=RLOC_00014302;geneIDs=comp156964_c0_seq1.path1;transcripts=comp156964_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5421628	5422531	.	-	.	ID=comp156964_c0_seq1.mrna1;geneID=comp156964_c0_seq1.path1;Name=comp156964_c0_seq1;Dir=indeterminatecoverage=99.3;identity=98.9;matches=894;mismatches=10;indels=0;unknowns=0;Target=comp156964_c0_seq1 910 7 .;CDS_Target=comp156964_c0_seq1 118 8 .;locus=RLOC_00014302
Chr2	stalkie_big_nohaplotig	exon	5421628	5422531	98	-	.	Parent=comp156964_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5422420	5422530	.	-	0	Parent=comp156964_c0_seq1.mrna1
Chr2	gffcl	locus	5423838	5424934	.	+	.	ID=RLOC_00014303;geneIDs=comp159830_c0_seq1.path1;transcripts=comp159830_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5423838	5424934	.	+	.	ID=comp159830_c0_seq1.mrna1;geneID=comp159830_c0_seq1.path1;Name=comp159830_c0_seq1;Dir=indeterminatecoverage=99.8;identity=95.4;matches=884;mismatches=37;indels=6;unknowns=0;Target=comp159830_c0_seq1 337 95 .;locus=RLOC_00014303
Chr2	stalkie_big_nohaplotig	exon	5423838	5424297	97	+	.	Parent=comp159830_c0_seq1.mrna1;Target=comp159830_c0_seq1 460 1 .
Chr2	stalkie_big_nohaplotig	exon	5424450	5424544	90	+	.	Parent=comp159830_c0_seq1.mrna1;Target=comp159830_c0_seq1 549 461 .
Chr2	stalkie_big_nohaplotig	exon	5424563	5424934	94	+	.	Parent=comp159830_c0_seq1.mrna1;Target=comp159830_c0_seq1 921 550 .
Chr2	stalkie_big_nohaplotig	CDS	5423932	5424174	.	+	0	Parent=comp159830_c0_seq1.mrna1
Chr2	gffcl	locus	5453663	5454699	.	-	.	ID=RLOC_00014304;geneIDs=comp143336_c0_seq1.path1;transcripts=comp143336_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5453663	5454699	.	-	.	ID=comp143336_c0_seq1.mrna1;geneID=comp143336_c0_seq1.path1;Name=comp143336_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1025;mismatches=4;indels=8;unknowns=0;Target=comp143336_c0_seq1 1029 1 .;CDS_Target=comp143336_c0_seq1 453 181 .;locus=RLOC_00014304
Chr2	stalkie_big_nohaplotig	exon	5453663	5454699	98	-	.	Parent=comp143336_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5454246	5454518	.	-	0	Parent=comp143336_c0_seq1.mrna1
Chr2	gffcl	locus	5458585	5465256	.	-	.	ID=RLOC_00014305;geneIDs=FBgn0033447.1.path1;transcripts=FBgn0033447.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5458585	5465256	.	-	.	ID=FBgn0033447.1.mrna1;geneID=FBgn0033447.1.path1;Name=FBgn0033447.1;Dir=sensecoverage=100.0;identity=99.5;matches=3883;mismatches=20;indels=0;unknowns=0;locus=RLOC_00014305
Chr2	stalkie_big_nohaplotig	exon	5458585	5458714	100	-	.	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 3774 3903 +
Chr2	stalkie_big_nohaplotig	exon	5458769	5458890	99	-	.	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 3652 3773 +
Chr2	stalkie_big_nohaplotig	exon	5459713	5459884	100	-	.	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 3480 3651 +
Chr2	stalkie_big_nohaplotig	exon	5460011	5460222	100	-	.	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 3268 3479 +
Chr2	stalkie_big_nohaplotig	exon	5460292	5460517	100	-	.	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 3042 3267 +
Chr2	stalkie_big_nohaplotig	exon	5460600	5460817	100	-	.	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 2824 3041 +
Chr2	stalkie_big_nohaplotig	exon	5461579	5461761	98	-	.	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 2641 2823 +
Chr2	stalkie_big_nohaplotig	exon	5461819	5462056	99	-	.	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 2403 2640 +
Chr2	stalkie_big_nohaplotig	exon	5462114	5462251	99	-	.	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 2265 2402 +
Chr2	stalkie_big_nohaplotig	exon	5462303	5462426	99	-	.	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 2141 2264 +
Chr2	stalkie_big_nohaplotig	exon	5462532	5464096	99	-	.	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 576 2140 +
Chr2	stalkie_big_nohaplotig	exon	5464161	5464441	98	-	.	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 295 575 +
Chr2	stalkie_big_nohaplotig	exon	5464852	5465091	100	-	.	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 55 294 +
Chr2	stalkie_big_nohaplotig	exon	5465203	5465256	100	-	.	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 1 54 +
Chr2	stalkie_big_nohaplotig	CDS	5458585	5458714	.	-	1	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 3774 3903 +
Chr2	stalkie_big_nohaplotig	CDS	5458769	5458890	.	-	0	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 3652 3773 +
Chr2	stalkie_big_nohaplotig	CDS	5459713	5459884	.	-	1	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 3480 3651 +
Chr2	stalkie_big_nohaplotig	CDS	5460011	5460222	.	-	0	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 3268 3479 +
Chr2	stalkie_big_nohaplotig	CDS	5460292	5460517	.	-	1	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 3042 3267 +
Chr2	stalkie_big_nohaplotig	CDS	5460600	5460817	.	-	0	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 2824 3041 +
Chr2	stalkie_big_nohaplotig	CDS	5461579	5461761	.	-	0	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 2641 2823 +
Chr2	stalkie_big_nohaplotig	CDS	5461819	5462056	.	-	1	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 2403 2640 +
Chr2	stalkie_big_nohaplotig	CDS	5462114	5462251	.	-	1	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 2265 2402 +
Chr2	stalkie_big_nohaplotig	CDS	5462303	5462426	.	-	2	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 2141 2264 +
Chr2	stalkie_big_nohaplotig	CDS	5462532	5464096	.	-	1	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 576 2140 +
Chr2	stalkie_big_nohaplotig	CDS	5464161	5464441	.	-	0	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 295 575 +
Chr2	stalkie_big_nohaplotig	CDS	5464852	5465091	.	-	0	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 55 294 +
Chr2	stalkie_big_nohaplotig	CDS	5465203	5465256	.	-	0	Parent=FBgn0033447.1.mrna1;Target=FBgn0033447.1 1 54 +
Chr2	gffcl	locus	5497564	5498065	.	-	.	ID=RLOC_00014306;geneIDs=comp144791_c0_seq1.path1;transcripts=comp144791_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5497564	5498065	.	-	.	ID=comp144791_c0_seq1.mrna1;geneID=comp144791_c0_seq1.path1;Name=comp144791_c0_seq1;Dir=indeterminatecoverage=98.7;identity=89.6;matches=450;mismatches=0;indels=52;unknowns=0;Target=comp144791_c0_seq1 451 2 .;CDS_Target=comp144791_c0_seq1 71 3 .;locus=RLOC_00014306
Chr2	stalkie_big_nohaplotig	exon	5497564	5498065	89	-	.	Parent=comp144791_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5497996	5498064	.	-	0	Parent=comp144791_c0_seq1.mrna1
Chr2	gffcl	locus	5508471	5509550	.	+	.	ID=RLOC_00014307;geneIDs=FBgn0033570.1.path1;transcripts=FBgn0033570.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5508471	5509550	.	+	.	ID=FBgn0033570.1.mrna1;geneID=FBgn0033570.1.path1;Name=FBgn0033570.1;Dir=sensecoverage=100.0;identity=99.8;matches=410;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014307
Chr2	stalkie_big_nohaplotig	exon	5508471	5508639	99	+	.	Parent=FBgn0033570.1.mrna1;Target=FBgn0033570.1 1 169 +
Chr2	stalkie_big_nohaplotig	exon	5508772	5508887	100	+	.	Parent=FBgn0033570.1.mrna1;Target=FBgn0033570.1 170 285 +
Chr2	stalkie_big_nohaplotig	exon	5509425	5509550	100	+	.	Parent=FBgn0033570.1.mrna1;Target=FBgn0033570.1 286 411 +
Chr2	stalkie_big_nohaplotig	CDS	5508471	5508639	.	+	0	Parent=FBgn0033570.1.mrna1;Target=FBgn0033570.1 1 169 +
Chr2	stalkie_big_nohaplotig	CDS	5508772	5508887	.	+	2	Parent=FBgn0033570.1.mrna1;Target=FBgn0033570.1 170 285 +
Chr2	stalkie_big_nohaplotig	CDS	5509425	5509550	.	+	0	Parent=FBgn0033570.1.mrna1;Target=FBgn0033570.1 286 411 +
Chr2	gffcl	locus	5511407	5519348	.	+	.	ID=RLOC_00014308;geneIDs=comp147473_c0_seq1.path1;transcripts=comp147473_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5511407	5519348	.	+	.	ID=comp147473_c0_seq1.mrna1;geneID=comp147473_c0_seq1.path1;Name=comp147473_c0_seq1;Dir=sensecoverage=99.8;identity=98.5;matches=593;mismatches=5;indels=4;unknowns=0;locus=RLOC_00014308
Chr2	stalkie_big_nohaplotig	exon	5511407	5511839	97	+	.	Parent=comp147473_c0_seq1.mrna1;Target=comp147473_c0_seq1 1 437 +
Chr2	stalkie_big_nohaplotig	exon	5511897	5511946	100	+	.	Parent=comp147473_c0_seq1.mrna1;Target=comp147473_c0_seq1 438 487 +
Chr2	stalkie_big_nohaplotig	exon	5519234	5519348	100	+	.	Parent=comp147473_c0_seq1.mrna1;Target=comp147473_c0_seq1 488 602 +
Chr2	stalkie_big_nohaplotig	CDS	5511551	5511839	.	+	0	Parent=comp147473_c0_seq1.mrna1;Target=comp147473_c0_seq1 149 437 +
Chr2	stalkie_big_nohaplotig	CDS	5511897	5511901	.	+	2	Parent=comp147473_c0_seq1.mrna1;Target=comp147473_c0_seq1 438 442 +
Chr2	gffcl	locus	5512314	5513581	.	-	.	ID=RLOC_00014309;geneIDs=comp151475_c0_seq1.path1;transcripts=comp151475_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5512314	5513581	.	-	.	ID=comp151475_c0_seq1.mrna1;geneID=comp151475_c0_seq1.path1;Name=comp151475_c0_seq1;Dir=sensecoverage=99.7;identity=96.5;matches=1168;mismatches=23;indels=19;unknowns=0;Target=comp151475_c0_seq1 175 783 +;locus=RLOC_00014309
Chr2	stalkie_big_nohaplotig	exon	5512314	5513381	96	-	.	Parent=comp151475_c0_seq1.mrna1;Target=comp151475_c0_seq1 144 1192 +
Chr2	stalkie_big_nohaplotig	exon	5513440	5513581	99	-	.	Parent=comp151475_c0_seq1.mrna1;Target=comp151475_c0_seq1 2 143 +
Chr2	stalkie_big_nohaplotig	CDS	5512742	5513350	.	-	0	Parent=comp151475_c0_seq1.mrna1
Chr2	gffcl	locus	5516496	5523360	.	-	.	ID=RLOC_00014310;geneIDs=FBgn0050020.1.path1;transcripts=FBgn0050020.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5516496	5523360	.	-	.	ID=FBgn0050020.1.mrna1;geneID=FBgn0050020.1.path1;Name=FBgn0050020.1;Dir=sensecoverage=100.0;identity=99.8;matches=2825;mismatches=7;indels=0;unknowns=0;locus=RLOC_00014310
Chr2	stalkie_big_nohaplotig	exon	5516496	5516734	100	-	.	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 2594 2832 +
Chr2	stalkie_big_nohaplotig	exon	5517448	5517465	100	-	.	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 2576 2593 +
Chr2	stalkie_big_nohaplotig	exon	5517530	5517622	100	-	.	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 2483 2575 +
Chr2	stalkie_big_nohaplotig	exon	5517687	5517737	100	-	.	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 2432 2482 +
Chr2	stalkie_big_nohaplotig	exon	5517797	5517925	99	-	.	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 2303 2431 +
Chr2	stalkie_big_nohaplotig	exon	5518003	5518542	99	-	.	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 1763 2302 +
Chr2	stalkie_big_nohaplotig	exon	5518602	5518901	99	-	.	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 1463 1762 +
Chr2	stalkie_big_nohaplotig	exon	5518961	5519128	100	-	.	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 1295 1462 +
Chr2	stalkie_big_nohaplotig	exon	5520423	5520560	98	-	.	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 1157 1294 +
Chr2	stalkie_big_nohaplotig	exon	5520619	5520777	100	-	.	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 998 1156 +
Chr2	stalkie_big_nohaplotig	exon	5520854	5521393	100	-	.	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 458 997 +
Chr2	stalkie_big_nohaplotig	exon	5522832	5522943	100	-	.	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 346 457 +
Chr2	stalkie_big_nohaplotig	exon	5523016	5523360	99	-	.	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 1 345 +
Chr2	stalkie_big_nohaplotig	CDS	5516496	5516734	.	-	2	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 2594 2832 +
Chr2	stalkie_big_nohaplotig	CDS	5517448	5517465	.	-	2	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 2576 2593 +
Chr2	stalkie_big_nohaplotig	CDS	5517530	5517622	.	-	2	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 2483 2575 +
Chr2	stalkie_big_nohaplotig	CDS	5517687	5517737	.	-	2	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 2432 2482 +
Chr2	stalkie_big_nohaplotig	CDS	5517797	5517925	.	-	2	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 2303 2431 +
Chr2	stalkie_big_nohaplotig	CDS	5518003	5518542	.	-	2	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 1763 2302 +
Chr2	stalkie_big_nohaplotig	CDS	5518602	5518901	.	-	2	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 1463 1762 +
Chr2	stalkie_big_nohaplotig	CDS	5518961	5519128	.	-	2	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 1295 1462 +
Chr2	stalkie_big_nohaplotig	CDS	5520423	5520560	.	-	2	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 1157 1294 +
Chr2	stalkie_big_nohaplotig	CDS	5520619	5520777	.	-	2	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 998 1156 +
Chr2	stalkie_big_nohaplotig	CDS	5520854	5521393	.	-	2	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 458 997 +
Chr2	stalkie_big_nohaplotig	CDS	5522832	5522943	.	-	0	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 346 457 +
Chr2	stalkie_big_nohaplotig	CDS	5523016	5523315	.	-	0	Parent=FBgn0050020.1.mrna1;Target=FBgn0050020.1 46 345 +
Chr2	gffcl	locus	5522507	7404015	.	-	.	ID=RLOC_00014311;geneIDs=comp134646_c0_seq1.path1;transcripts=comp134646_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5522507	7404015	.	-	.	ID=comp134646_c0_seq1.mrna1;geneID=comp134646_c0_seq1.path1;Name=comp134646_c0_seq1;Dir=indeterminatecoverage=79.3;identity=99.7;matches=390;mismatches=1;indels=0;unknowns=0;Target=comp134646_c0_seq1 305 162 .;locus=RLOC_00014311
Chr2	stalkie_big_nohaplotig	exon	5522507	5522513	100	-	.	Parent=comp134646_c0_seq1.mrna1;Target=comp134646_c0_seq1 442 436 .
Chr2	stalkie_big_nohaplotig	exon	5529378	5529379	100	-	.	Parent=comp134646_c0_seq1.mrna1;Target=comp134646_c0_seq1 435 434 .
Chr2	stalkie_big_nohaplotig	exon	7403634	7404015	99	-	.	Parent=comp134646_c0_seq1.mrna1;Target=comp134646_c0_seq1 433 52 .
Chr2	stalkie_big_nohaplotig	CDS	7403762	7403905	.	-	0	Parent=comp134646_c0_seq1.mrna1
Chr2	gffcl	locus	5525536	5529678	.	+	.	ID=RLOC_00014312;geneIDs=Dv_FBgn0208491.1.path1;transcripts=Dv_FBgn0208491.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5525536	5529678	.	+	.	ID=Dv_FBgn0208491.1.mrna1;geneID=Dv_FBgn0208491.1.path1;Name=Dv_FBgn0208491.1;Dir=sensecoverage=100.0;identity=99.2;matches=1809;mismatches=15;indels=0;unknowns=0;locus=RLOC_00014312
Chr2	stalkie_big_nohaplotig	exon	5525536	5525554	100	+	.	Parent=Dv_FBgn0208491.1.mrna1;Target=Dv_FBgn0208491.1 1 19 +
Chr2	stalkie_big_nohaplotig	exon	5525606	5525700	98	+	.	Parent=Dv_FBgn0208491.1.mrna1;Target=Dv_FBgn0208491.1 20 114 +
Chr2	stalkie_big_nohaplotig	exon	5526588	5526727	98	+	.	Parent=Dv_FBgn0208491.1.mrna1;Target=Dv_FBgn0208491.1 115 254 +
Chr2	stalkie_big_nohaplotig	exon	5526803	5527398	99	+	.	Parent=Dv_FBgn0208491.1.mrna1;Target=Dv_FBgn0208491.1 255 850 +
Chr2	stalkie_big_nohaplotig	exon	5527885	5528597	98	+	.	Parent=Dv_FBgn0208491.1.mrna1;Target=Dv_FBgn0208491.1 851 1563 +
Chr2	stalkie_big_nohaplotig	exon	5529418	5529678	99	+	.	Parent=Dv_FBgn0208491.1.mrna1;Target=Dv_FBgn0208491.1 1564 1824 +
Chr2	stalkie_big_nohaplotig	CDS	5525536	5525554	.	+	0	Parent=Dv_FBgn0208491.1.mrna1;Target=Dv_FBgn0208491.1 1 19 +
Chr2	stalkie_big_nohaplotig	CDS	5525606	5525700	.	+	2	Parent=Dv_FBgn0208491.1.mrna1;Target=Dv_FBgn0208491.1 20 114 +
Chr2	stalkie_big_nohaplotig	CDS	5526588	5526727	.	+	0	Parent=Dv_FBgn0208491.1.mrna1;Target=Dv_FBgn0208491.1 115 254 +
Chr2	stalkie_big_nohaplotig	CDS	5526803	5527398	.	+	1	Parent=Dv_FBgn0208491.1.mrna1;Target=Dv_FBgn0208491.1 255 850 +
Chr2	stalkie_big_nohaplotig	CDS	5527885	5528597	.	+	2	Parent=Dv_FBgn0208491.1.mrna1;Target=Dv_FBgn0208491.1 851 1563 +
Chr2	stalkie_big_nohaplotig	CDS	5529418	5529678	.	+	0	Parent=Dv_FBgn0208491.1.mrna1;Target=Dv_FBgn0208491.1 1564 1824 +
Chr2	gffcl	locus	5530888	5534356	.	+	.	ID=RLOC_00014313;geneIDs=FBgn0036831.1.path1,FBgn0036831.3.path1;transcripts=FBgn0036831.1.mrna1,FBgn0036831.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5530888	5532915	.	+	.	ID=FBgn0036831.1.mrna1;geneID=FBgn0036831.1.path1;Name=FBgn0036831.1;Dir=sensecoverage=100.0;identity=99.9;matches=1358;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014313
Chr2	stalkie_big_nohaplotig	exon	5530888	5531032	100	+	.	Parent=FBgn0036831.1.mrna1;Target=FBgn0036831.1 1 145 +
Chr2	stalkie_big_nohaplotig	exon	5531095	5531571	100	+	.	Parent=FBgn0036831.1.mrna1;Target=FBgn0036831.1 146 622 +
Chr2	stalkie_big_nohaplotig	exon	5531636	5532322	100	+	.	Parent=FBgn0036831.1.mrna1;Target=FBgn0036831.1 623 1309 +
Chr2	stalkie_big_nohaplotig	exon	5532866	5532915	98	+	.	Parent=FBgn0036831.1.mrna1;Target=FBgn0036831.1 1310 1359 +
Chr2	stalkie_big_nohaplotig	CDS	5530888	5531032	.	+	0	Parent=FBgn0036831.1.mrna1;Target=FBgn0036831.1 1 145 +
Chr2	stalkie_big_nohaplotig	CDS	5531095	5531571	.	+	2	Parent=FBgn0036831.1.mrna1;Target=FBgn0036831.1 146 622 +
Chr2	stalkie_big_nohaplotig	CDS	5531636	5532322	.	+	2	Parent=FBgn0036831.1.mrna1;Target=FBgn0036831.1 623 1309 +
Chr2	stalkie_big_nohaplotig	CDS	5532866	5532915	.	+	2	Parent=FBgn0036831.1.mrna1;Target=FBgn0036831.1 1310 1359 +
Chr2	stalkie_big_nohaplotig	mRNA	5532895	5534356	.	+	.	ID=FBgn0036831.3.mrna1;geneID=FBgn0036831.3.path1;Name=FBgn0036831.3;Dir=sensecoverage=100.0;identity=99.7;matches=1161;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014313
Chr2	stalkie_big_nohaplotig	exon	5532895	5533384	99	+	.	Parent=FBgn0036831.3.mrna1;Target=FBgn0036831.3 1 490 +
Chr2	stalkie_big_nohaplotig	exon	5533683	5534356	99	+	.	Parent=FBgn0036831.3.mrna1;Target=FBgn0036831.3 491 1164 +
Chr2	stalkie_big_nohaplotig	CDS	5532895	5533384	.	+	0	Parent=FBgn0036831.3.mrna1;Target=FBgn0036831.3 1 490 +
Chr2	stalkie_big_nohaplotig	CDS	5533683	5534356	.	+	2	Parent=FBgn0036831.3.mrna1;Target=FBgn0036831.3 491 1164 +
Chr2	gffcl	locus	5543346	5544067	.	+	.	ID=RLOC_00014314;geneIDs=comp152722_c0_seq1.path1;transcripts=comp152722_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5543346	5544067	.	+	.	ID=comp152722_c0_seq1.mrna1;geneID=comp152722_c0_seq1.path1;Name=comp152722_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=722;mismatches=0;indels=0;unknowns=0;Target=comp152722_c0_seq1 722 1 .;CDS_Target=comp152722_c0_seq1 600 490 .;locus=RLOC_00014314
Chr2	stalkie_big_nohaplotig	exon	5543346	5544067	100	+	.	Parent=comp152722_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5543835	5543945	.	+	0	Parent=comp152722_c0_seq1.mrna1
Chr2	gffcl	locus	5544489	5545175	.	+	.	ID=RLOC_00014315;geneIDs=comp160039_c0_seq1.path1;transcripts=comp160039_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5544489	5545175	.	+	.	ID=comp160039_c0_seq1.mrna1;geneID=comp160039_c0_seq1.path1;Name=comp160039_c0_seq1;Dir=indeterminatecoverage=94.9;identity=95.3;matches=665;mismatches=17;indels=16;unknowns=0;Target=comp160039_c0_seq1 693 1 .;CDS_Target=comp160039_c0_seq1 660 517 .;locus=RLOC_00014315
Chr2	stalkie_big_nohaplotig	exon	5544489	5545175	95	+	.	Parent=comp160039_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5544999	5545142	.	+	0	Parent=comp160039_c0_seq1.mrna1
Chr2	gffcl	locus	5545442	5545903	.	+	.	ID=RLOC_00014316;geneIDs=comp135588_c0_seq1.path1;transcripts=comp135588_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5545442	5545903	.	+	.	ID=comp135588_c0_seq1.mrna1;geneID=comp135588_c0_seq1.path1;Name=comp135588_c0_seq1;Dir=indeterminatecoverage=96.0;identity=98.1;matches=453;mismatches=9;indels=0;unknowns=0;Target=comp135588_c0_seq1 462 1 .;CDS_Target=comp135588_c0_seq1 462 412 .;locus=RLOC_00014316
Chr2	stalkie_big_nohaplotig	exon	5545442	5545903	98	+	.	Parent=comp135588_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5545853	5545903	.	+	0	Parent=comp135588_c0_seq1.mrna1
Chr2	gffcl	locus	5547395	5858134	.	-	.	ID=RLOC_00014317;geneIDs=FBgn0086358.1.path1;transcripts=FBgn0086358.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5547395	5858134	.	-	.	ID=FBgn0086358.1.mrna1;geneID=FBgn0086358.1.path1;Name=FBgn0086358.1;Dir=sensecoverage=86.3;identity=97.1;matches=1580;mismatches=28;indels=20;unknowns=0;locus=RLOC_00014317
Chr2	stalkie_big_nohaplotig	exon	5547395	5547681	99	-	.	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 1601 1887 +
Chr2	stalkie_big_nohaplotig	exon	5547767	5547979	100	-	.	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 1388 1600 +
Chr2	stalkie_big_nohaplotig	exon	5556155	5557076	99	-	.	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 466 1387 +
Chr2	stalkie_big_nohaplotig	exon	5761365	5761378	100	-	.	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 452 465 +
Chr2	stalkie_big_nohaplotig	exon	5767719	5767721	100	-	.	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 449 451 +
Chr2	stalkie_big_nohaplotig	exon	5771771	5771773	100	-	.	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 446 448 +
Chr2	stalkie_big_nohaplotig	exon	5784661	5784669	88	-	.	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 437 445 +
Chr2	stalkie_big_nohaplotig	exon	5788256	5788261	66	-	.	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 431 436 +
Chr2	stalkie_big_nohaplotig	exon	5793085	5793089	100	-	.	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 426 430 +
Chr2	stalkie_big_nohaplotig	exon	5797340	5797342	100	-	.	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 423 425 +
Chr2	stalkie_big_nohaplotig	exon	5803334	5803343	100	-	.	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 413 422 +
Chr2	stalkie_big_nohaplotig	exon	5809313	5809325	84	-	.	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 400 412 +
Chr2	stalkie_big_nohaplotig	exon	5809917	5809933	72	-	.	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 382 399 +
Chr2	stalkie_big_nohaplotig	exon	5810167	5810203	55	-	.	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 328 381 +
Chr2	stalkie_big_nohaplotig	exon	5818319	5818331	92	-	.	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 315 327 +
Chr2	stalkie_big_nohaplotig	exon	5818456	5818482	65	-	.	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 286 314 +
Chr2	stalkie_big_nohaplotig	exon	5822635	5822636	100	-	.	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 284 285 +
Chr2	stalkie_big_nohaplotig	exon	5826690	5826692	100	-	.	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 281 283 +
Chr2	stalkie_big_nohaplotig	exon	5831148	5831149	100	-	.	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 279 280 +
Chr2	stalkie_big_nohaplotig	exon	5848623	5848627	100	-	.	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 274 278 +
Chr2	stalkie_big_nohaplotig	exon	5850513	5850518	100	-	.	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 268 273 +
Chr2	stalkie_big_nohaplotig	exon	5858127	5858134	100	-	.	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 260 267 +
Chr2	stalkie_big_nohaplotig	CDS	5547395	5547681	.	-	2	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 1601 1887 +
Chr2	stalkie_big_nohaplotig	CDS	5547767	5547979	.	-	2	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 1388 1600 +
Chr2	stalkie_big_nohaplotig	CDS	5556155	5556230	.	-	0	Parent=FBgn0086358.1.mrna1;Target=FBgn0086358.1 1312 1387 +
Chr2	gffcl	locus	5575066	5576734	.	+	.	ID=RLOC_00014318;geneIDs=FBgn0034814.1.path1;transcripts=FBgn0034814.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5575066	5576734	.	+	.	ID=FBgn0034814.1.mrna1;geneID=FBgn0034814.1.path1;Name=FBgn0034814.1;Dir=sensecoverage=100.0;identity=99.8;matches=1440;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014318
Chr2	stalkie_big_nohaplotig	exon	5575066	5575384	99	+	.	Parent=FBgn0034814.1.mrna1;Target=FBgn0034814.1 1 319 +
Chr2	stalkie_big_nohaplotig	exon	5575611	5576734	100	+	.	Parent=FBgn0034814.1.mrna1;Target=FBgn0034814.1 320 1443 +
Chr2	stalkie_big_nohaplotig	CDS	5575129	5575384	.	+	0	Parent=FBgn0034814.1.mrna1;Target=FBgn0034814.1 64 319 +
Chr2	stalkie_big_nohaplotig	CDS	5575611	5576734	.	+	2	Parent=FBgn0034814.1.mrna1;Target=FBgn0034814.1 320 1443 +
Chr2	gffcl	locus	5576898	5577608	.	-	.	ID=RLOC_00014319;geneIDs=FBgn0033556.1.path1;transcripts=FBgn0033556.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5576898	5577608	.	-	.	ID=FBgn0033556.1.mrna1;geneID=FBgn0033556.1.path1;Name=FBgn0033556.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=711;mismatches=0;indels=0;unknowns=0;Target=FBgn0033556.1 711 1 .;locus=RLOC_00014319
Chr2	stalkie_big_nohaplotig	exon	5576898	5577608	100	-	.	Parent=FBgn0033556.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5576898	5577608	.	-	0	Parent=FBgn0033556.1.mrna1
Chr2	gffcl	locus	5579336	5582903	.	+	.	ID=RLOC_00014320;geneIDs=FBgn0033845.2.path1;transcripts=FBgn0033845.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5579336	5582903	.	+	.	ID=FBgn0033845.2.mrna1;geneID=FBgn0033845.2.path1;Name=FBgn0033845.2;Dir=sensecoverage=100.0;identity=99.2;matches=2868;mismatches=20;indels=4;unknowns=0;locus=RLOC_00014320
Chr2	stalkie_big_nohaplotig	exon	5579336	5579903	99	+	.	Parent=FBgn0033845.2.mrna1;Target=FBgn0033845.2 1 568 +
Chr2	stalkie_big_nohaplotig	exon	5579971	5580834	98	+	.	Parent=FBgn0033845.2.mrna1;Target=FBgn0033845.2 569 1435 +
Chr2	stalkie_big_nohaplotig	exon	5581275	5581780	99	+	.	Parent=FBgn0033845.2.mrna1;Target=FBgn0033845.2 1436 1941 +
Chr2	stalkie_big_nohaplotig	exon	5581904	5582765	99	+	.	Parent=FBgn0033845.2.mrna1;Target=FBgn0033845.2 1942 2804 +
Chr2	stalkie_big_nohaplotig	exon	5582816	5582903	98	+	.	Parent=FBgn0033845.2.mrna1;Target=FBgn0033845.2 2805 2892 +
Chr2	stalkie_big_nohaplotig	CDS	5579336	5579903	.	+	0	Parent=FBgn0033845.2.mrna1;Target=FBgn0033845.2 1 568 +
Chr2	stalkie_big_nohaplotig	CDS	5579971	5580834	.	+	2	Parent=FBgn0033845.2.mrna1;Target=FBgn0033845.2 569 1435 +
Chr2	stalkie_big_nohaplotig	CDS	5581275	5581780	.	+	2	Parent=FBgn0033845.2.mrna1;Target=FBgn0033845.2 1436 1941 +
Chr2	stalkie_big_nohaplotig	CDS	5581904	5582765	.	+	0	Parent=FBgn0033845.2.mrna1;Target=FBgn0033845.2 1942 2804 +
Chr2	stalkie_big_nohaplotig	CDS	5582816	5582903	.	+	2	Parent=FBgn0033845.2.mrna1;Target=FBgn0033845.2 2805 2892 +
Chr2	gffcl	locus	5584073	5584590	.	+	.	ID=RLOC_00014321;geneIDs=FBgn0033554.1.path1;transcripts=FBgn0033554.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5584073	5584590	.	+	.	ID=FBgn0033554.1.mrna1;geneID=FBgn0033554.1.path1;Name=FBgn0033554.1;Dir=sensecoverage=100.0;identity=99.6;matches=463;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014321
Chr2	stalkie_big_nohaplotig	exon	5584073	5584236	99	+	.	Parent=FBgn0033554.1.mrna1;Target=FBgn0033554.1 1 164 +
Chr2	stalkie_big_nohaplotig	exon	5584290	5584590	99	+	.	Parent=FBgn0033554.1.mrna1;Target=FBgn0033554.1 165 465 +
Chr2	stalkie_big_nohaplotig	CDS	5584073	5584236	.	+	0	Parent=FBgn0033554.1.mrna1;Target=FBgn0033554.1 1 164 +
Chr2	stalkie_big_nohaplotig	CDS	5584290	5584590	.	+	1	Parent=FBgn0033554.1.mrna1;Target=FBgn0033554.1 165 465 +
Chr2	gffcl	locus	5584827	5589039	.	-	.	ID=RLOC_00014322;geneIDs=FBgn0034142.1.path1;transcripts=FBgn0034142.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5584827	5589039	.	-	.	ID=FBgn0034142.1.mrna1;geneID=FBgn0034142.1.path1;Name=FBgn0034142.1;Dir=sensecoverage=99.1;identity=99.8;matches=1543;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014322
Chr2	stalkie_big_nohaplotig	exon	5584827	5584962	99	-	.	Parent=FBgn0034142.1.mrna1;Target=FBgn0034142.1 1425 1560 +
Chr2	stalkie_big_nohaplotig	exon	5585025	5585282	99	-	.	Parent=FBgn0034142.1.mrna1;Target=FBgn0034142.1 1167 1424 +
Chr2	stalkie_big_nohaplotig	exon	5586371	5586490	100	-	.	Parent=FBgn0034142.1.mrna1;Target=FBgn0034142.1 1047 1166 +
Chr2	stalkie_big_nohaplotig	exon	5586554	5586688	100	-	.	Parent=FBgn0034142.1.mrna1;Target=FBgn0034142.1 912 1046 +
Chr2	stalkie_big_nohaplotig	exon	5587928	5588120	100	-	.	Parent=FBgn0034142.1.mrna1;Target=FBgn0034142.1 719 911 +
Chr2	stalkie_big_nohaplotig	exon	5588191	5588300	100	-	.	Parent=FBgn0034142.1.mrna1;Target=FBgn0034142.1 609 718 +
Chr2	stalkie_big_nohaplotig	exon	5588363	5588508	100	-	.	Parent=FBgn0034142.1.mrna1;Target=FBgn0034142.1 463 608 +
Chr2	stalkie_big_nohaplotig	exon	5588592	5589039	100	-	.	Parent=FBgn0034142.1.mrna1;Target=FBgn0034142.1 15 462 +
Chr2	stalkie_big_nohaplotig	CDS	5584827	5584962	.	-	1	Parent=FBgn0034142.1.mrna1;Target=FBgn0034142.1 1425 1560 +
Chr2	stalkie_big_nohaplotig	CDS	5585025	5585282	.	-	1	Parent=FBgn0034142.1.mrna1;Target=FBgn0034142.1 1167 1424 +
Chr2	stalkie_big_nohaplotig	CDS	5586371	5586490	.	-	1	Parent=FBgn0034142.1.mrna1;Target=FBgn0034142.1 1047 1166 +
Chr2	stalkie_big_nohaplotig	CDS	5586554	5586688	.	-	1	Parent=FBgn0034142.1.mrna1;Target=FBgn0034142.1 912 1046 +
Chr2	stalkie_big_nohaplotig	CDS	5587928	5588120	.	-	2	Parent=FBgn0034142.1.mrna1;Target=FBgn0034142.1 719 911 +
Chr2	stalkie_big_nohaplotig	CDS	5588191	5588300	.	-	1	Parent=FBgn0034142.1.mrna1;Target=FBgn0034142.1 609 718 +
Chr2	stalkie_big_nohaplotig	CDS	5588363	5588508	.	-	0	Parent=FBgn0034142.1.mrna1;Target=FBgn0034142.1 463 608 +
Chr2	stalkie_big_nohaplotig	CDS	5588592	5589038	.	-	0	Parent=FBgn0034142.1.mrna1;Target=FBgn0034142.1 16 462 +
Chr2	gffcl	locus	5585591	5586118	.	-	.	ID=RLOC_00014323;geneIDs=comp150303_c0_seq1.path1;transcripts=comp150303_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5585591	5586118	.	-	.	ID=comp150303_c0_seq1.mrna1;geneID=comp150303_c0_seq1.path1;Name=comp150303_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.2;matches=498;mismatches=19;indels=35;unknowns=0;Target=comp150303_c0_seq1 541 1 .;CDS_Target=comp150303_c0_seq1 540 277 .;locus=RLOC_00014323
Chr2	stalkie_big_nohaplotig	exon	5585591	5586118	90	-	.	Parent=comp150303_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5585592	5585840	.	-	0	Parent=comp150303_c0_seq1.mrna1
Chr2	gffcl	locus	5607551	5612866	.	-	.	ID=RLOC_00014324;geneIDs=FBgn0034143.1.path1;transcripts=FBgn0034143.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5607551	5612866	.	-	.	ID=FBgn0034143.1.mrna1;geneID=FBgn0034143.1.path1;Name=FBgn0034143.1;Dir=sensecoverage=100.0;identity=99.5;matches=1645;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014324
Chr2	stalkie_big_nohaplotig	exon	5607551	5607680	99	-	.	Parent=FBgn0034143.1.mrna1;Target=FBgn0034143.1 1524 1653 +
Chr2	stalkie_big_nohaplotig	exon	5607741	5607998	98	-	.	Parent=FBgn0034143.1.mrna1;Target=FBgn0034143.1 1266 1523 +
Chr2	stalkie_big_nohaplotig	exon	5608084	5608525	99	-	.	Parent=FBgn0034143.1.mrna1;Target=FBgn0034143.1 824 1265 +
Chr2	stalkie_big_nohaplotig	exon	5609206	5609710	100	-	.	Parent=FBgn0034143.1.mrna1;Target=FBgn0034143.1 319 823 +
Chr2	stalkie_big_nohaplotig	exon	5612549	5612866	99	-	.	Parent=FBgn0034143.1.mrna1;Target=FBgn0034143.1 1 318 +
Chr2	stalkie_big_nohaplotig	CDS	5607551	5607680	.	-	1	Parent=FBgn0034143.1.mrna1;Target=FBgn0034143.1 1524 1653 +
Chr2	stalkie_big_nohaplotig	CDS	5607741	5607998	.	-	1	Parent=FBgn0034143.1.mrna1;Target=FBgn0034143.1 1266 1523 +
Chr2	stalkie_big_nohaplotig	CDS	5608084	5608525	.	-	2	Parent=FBgn0034143.1.mrna1;Target=FBgn0034143.1 824 1265 +
Chr2	stalkie_big_nohaplotig	CDS	5609206	5609710	.	-	0	Parent=FBgn0034143.1.mrna1;Target=FBgn0034143.1 319 823 +
Chr2	stalkie_big_nohaplotig	CDS	5612549	5612866	.	-	0	Parent=FBgn0034143.1.mrna1;Target=FBgn0034143.1 1 318 +
Chr2	gffcl	locus	5638594	5646265	.	+	.	ID=RLOC_00014325;geneIDs=FBgn0034145.1.path1;transcripts=FBgn0034145.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5638594	5646265	.	+	.	ID=FBgn0034145.1.mrna1;geneID=FBgn0034145.1.path1;Name=FBgn0034145.1;Dir=sensecoverage=100.0;identity=99.9;matches=1765;mismatches=1;indels=1;unknowns=0;locus=RLOC_00014325
Chr2	stalkie_big_nohaplotig	exon	5638594	5638901	99	+	.	Parent=FBgn0034145.1.mrna1;Target=FBgn0034145.1 1 309 +
Chr2	stalkie_big_nohaplotig	exon	5642741	5642857	100	+	.	Parent=FBgn0034145.1.mrna1;Target=FBgn0034145.1 310 426 +
Chr2	stalkie_big_nohaplotig	exon	5644063	5644167	100	+	.	Parent=FBgn0034145.1.mrna1;Target=FBgn0034145.1 427 531 +
Chr2	stalkie_big_nohaplotig	exon	5644260	5644403	100	+	.	Parent=FBgn0034145.1.mrna1;Target=FBgn0034145.1 532 675 +
Chr2	stalkie_big_nohaplotig	exon	5644465	5644599	100	+	.	Parent=FBgn0034145.1.mrna1;Target=FBgn0034145.1 676 810 +
Chr2	stalkie_big_nohaplotig	exon	5644668	5644788	100	+	.	Parent=FBgn0034145.1.mrna1;Target=FBgn0034145.1 811 931 +
Chr2	stalkie_big_nohaplotig	exon	5644942	5645241	100	+	.	Parent=FBgn0034145.1.mrna1;Target=FBgn0034145.1 932 1231 +
Chr2	stalkie_big_nohaplotig	exon	5645350	5645482	100	+	.	Parent=FBgn0034145.1.mrna1;Target=FBgn0034145.1 1232 1364 +
Chr2	stalkie_big_nohaplotig	exon	5645794	5646051	100	+	.	Parent=FBgn0034145.1.mrna1;Target=FBgn0034145.1 1365 1622 +
Chr2	stalkie_big_nohaplotig	exon	5646121	5646265	99	+	.	Parent=FBgn0034145.1.mrna1;Target=FBgn0034145.1 1623 1767 +
Chr2	stalkie_big_nohaplotig	CDS	5638677	5638901	.	+	0	Parent=FBgn0034145.1.mrna1;Target=FBgn0034145.1 85 309 +
Chr2	stalkie_big_nohaplotig	CDS	5642741	5642857	.	+	0	Parent=FBgn0034145.1.mrna1;Target=FBgn0034145.1 310 426 +
Chr2	stalkie_big_nohaplotig	CDS	5644063	5644167	.	+	0	Parent=FBgn0034145.1.mrna1;Target=FBgn0034145.1 427 531 +
Chr2	stalkie_big_nohaplotig	CDS	5644260	5644403	.	+	0	Parent=FBgn0034145.1.mrna1;Target=FBgn0034145.1 532 675 +
Chr2	stalkie_big_nohaplotig	CDS	5644465	5644599	.	+	0	Parent=FBgn0034145.1.mrna1;Target=FBgn0034145.1 676 810 +
Chr2	stalkie_big_nohaplotig	CDS	5644668	5644788	.	+	0	Parent=FBgn0034145.1.mrna1;Target=FBgn0034145.1 811 931 +
Chr2	stalkie_big_nohaplotig	CDS	5644942	5645241	.	+	2	Parent=FBgn0034145.1.mrna1;Target=FBgn0034145.1 932 1231 +
Chr2	stalkie_big_nohaplotig	CDS	5645350	5645482	.	+	2	Parent=FBgn0034145.1.mrna1;Target=FBgn0034145.1 1232 1364 +
Chr2	stalkie_big_nohaplotig	CDS	5645794	5646051	.	+	1	Parent=FBgn0034145.1.mrna1;Target=FBgn0034145.1 1365 1622 +
Chr2	stalkie_big_nohaplotig	CDS	5646121	5646265	.	+	1	Parent=FBgn0034145.1.mrna1;Target=FBgn0034145.1 1623 1767 +
Chr2	gffcl	locus	5650028	5650280	.	-	.	ID=RLOC_00014326;geneIDs=comp99837_c0_seq1.path1;transcripts=comp99837_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5650028	5650280	.	-	.	ID=comp99837_c0_seq1.mrna1;geneID=comp99837_c0_seq1.path1;Name=comp99837_c0_seq1;Dir=indeterminatecoverage=93.4;identity=99.6;matches=252;mismatches=1;indels=0;unknowns=0;Target=comp99837_c0_seq1 271 19 .;CDS_Target=comp99837_c0_seq1 195 139 .;locus=RLOC_00014326
Chr2	stalkie_big_nohaplotig	exon	5650028	5650280	99	-	.	Parent=comp99837_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5650104	5650160	.	-	0	Parent=comp99837_c0_seq1.mrna1
Chr2	gffcl	locus	5650474	5712503	.	-	.	ID=RLOC_00014327;geneIDs=comp67170_c0_seq1.path1;transcripts=comp67170_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5650474	5712503	.	-	.	ID=comp67170_c0_seq1.mrna1;geneID=comp67170_c0_seq1.path1;Name=comp67170_c0_seq1;Dir=indeterminatecoverage=91.1;identity=100.0;matches=329;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014327
Chr2	stalkie_big_nohaplotig	exon	5650474	5650765	100	-	.	Parent=comp67170_c0_seq1.mrna1;Target=comp67170_c0_seq1 361 70 .
Chr2	stalkie_big_nohaplotig	exon	5692858	5692862	100	-	.	Parent=comp67170_c0_seq1.mrna1;Target=comp67170_c0_seq1 69 65 .
Chr2	stalkie_big_nohaplotig	exon	5697793	5697800	100	-	.	Parent=comp67170_c0_seq1.mrna1;Target=comp67170_c0_seq1 64 57 .
Chr2	stalkie_big_nohaplotig	exon	5705414	5705415	100	-	.	Parent=comp67170_c0_seq1.mrna1;Target=comp67170_c0_seq1 56 55 .
Chr2	stalkie_big_nohaplotig	exon	5712212	5712217	100	-	.	Parent=comp67170_c0_seq1.mrna1;Target=comp67170_c0_seq1 54 49 .
Chr2	stalkie_big_nohaplotig	exon	5712488	5712503	100	-	.	Parent=comp67170_c0_seq1.mrna1;Target=comp67170_c0_seq1 48 33 .
Chr2	stalkie_big_nohaplotig	CDS	5650729	5650765	.	-	1	Parent=comp67170_c0_seq1.mrna1;Target=comp67170_c0_seq1 106 70 .
Chr2	stalkie_big_nohaplotig	CDS	5692858	5692862	.	-	0	Parent=comp67170_c0_seq1.mrna1;Target=comp67170_c0_seq1 69 65 .
Chr2	stalkie_big_nohaplotig	CDS	5697793	5697800	.	-	2	Parent=comp67170_c0_seq1.mrna1;Target=comp67170_c0_seq1 64 57 .
Chr2	stalkie_big_nohaplotig	CDS	5705414	5705415	.	-	1	Parent=comp67170_c0_seq1.mrna1;Target=comp67170_c0_seq1 56 55 .
Chr2	stalkie_big_nohaplotig	CDS	5712212	5712217	.	-	1	Parent=comp67170_c0_seq1.mrna1;Target=comp67170_c0_seq1 54 49 .
Chr2	stalkie_big_nohaplotig	CDS	5712488	5712501	.	-	0	Parent=comp67170_c0_seq1.mrna1;Target=comp67170_c0_seq1 48 35 .
Chr2	gffcl	locus	5653067	5653591	.	+	.	ID=RLOC_00014328;geneIDs=comp159181_c0_seq1.path1;transcripts=comp159181_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5653067	5653591	.	+	.	ID=comp159181_c0_seq1.mrna1;geneID=comp159181_c0_seq1.path1;Name=comp159181_c0_seq1;Dir=indeterminatecoverage=92.6;identity=98.3;matches=516;mismatches=9;indels=0;unknowns=0;Target=comp159181_c0_seq1 567 43 .;CDS_Target=comp159181_c0_seq1 131 45 .;locus=RLOC_00014328
Chr2	stalkie_big_nohaplotig	exon	5653067	5653591	98	+	.	Parent=comp159181_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5653069	5653155	.	+	0	Parent=comp159181_c0_seq1.mrna1
Chr2	gffcl	locus	5655936	5656551	.	+	.	ID=RLOC_00014329;geneIDs=comp143771_c1_seq1.path1;transcripts=comp143771_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5655936	5656551	.	+	.	ID=comp143771_c1_seq1.mrna1;geneID=comp143771_c1_seq1.path1;Name=comp143771_c1_seq1;Dir=indeterminatecoverage=99.0;identity=99.4;matches=613;mismatches=3;indels=1;unknowns=0;Target=comp143771_c1_seq1 623 7 .;CDS_Target=comp143771_c1_seq1 324 127 .;locus=RLOC_00014329
Chr2	stalkie_big_nohaplotig	exon	5655936	5656551	99	+	.	Parent=comp143771_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5656056	5656252	.	+	0	Parent=comp143771_c1_seq1.mrna1
Chr2	gffcl	locus	5660375	5660749	.	+	.	ID=RLOC_00014330;geneIDs=comp145692_c0_seq1.path1;transcripts=comp145692_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5660375	5660749	.	+	.	ID=comp145692_c0_seq1.mrna1;geneID=comp145692_c0_seq1.path1;Name=comp145692_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=373;mismatches=2;indels=5;unknowns=0;Target=comp145692_c0_seq1 380 1 .;CDS_Target=comp145692_c0_seq1 26 3 .;locus=RLOC_00014330
Chr2	stalkie_big_nohaplotig	exon	5660375	5660749	98	+	.	Parent=comp145692_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5660377	5660400	.	+	0	Parent=comp145692_c0_seq1.mrna1
Chr2	gffcl	locus	5661879	5662855	.	-	.	ID=RLOC_00014331;geneIDs=comp155513_c0_seq1.path1;transcripts=comp155513_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5661879	5662855	.	-	.	ID=comp155513_c0_seq1.mrna1;geneID=comp155513_c0_seq1.path1;Name=comp155513_c0_seq1;Dir=indeterminatecoverage=98.5;identity=98.5;matches=962;mismatches=11;indels=4;unknowns=0;Target=comp155513_c0_seq1 988 16 .;CDS_Target=comp155513_c0_seq1 249 217 .;locus=RLOC_00014331
Chr2	stalkie_big_nohaplotig	exon	5661879	5662855	98	-	.	Parent=comp155513_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5662618	5662654	.	-	0	Parent=comp155513_c0_seq1.mrna1
Chr2	gffcl	locus	5663219	5664782	.	-	.	ID=RLOC_00014332;geneIDs=comp159505_c0_seq1.path1;transcripts=comp159505_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5663219	5664782	.	-	.	ID=comp159505_c0_seq1.mrna1;geneID=comp159505_c0_seq1.path1;Name=comp159505_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1553;mismatches=10;indels=6;unknowns=0;Target=comp159505_c0_seq1 1568 1 .;CDS_Target=comp159505_c0_seq1 1454 1347 .;locus=RLOC_00014332
Chr2	stalkie_big_nohaplotig	exon	5663219	5664782	98	-	.	Parent=comp159505_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5663333	5663440	.	-	0	Parent=comp159505_c0_seq1.mrna1
Chr2	gffcl	locus	5665940	5674360	.	-	.	ID=RLOC_00014333;geneIDs=FBgn0037207.1.path2,FBgn0040505.1.path1;transcripts=FBgn0040505.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5666069	5674360	.	-	.	ID=FBgn0040505.1.mrna1;geneID=FBgn0040505.1.path1;Name=FBgn0040505.1;Dir=sensecoverage=87.2;identity=99.6;matches=5336;mismatches=19;indels=0;unknowns=0;locus=RLOC_00014333
Chr2	stalkie_big_nohaplotig	exon	5666069	5666887	99	-	.	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 4537 5355 +
Chr2	stalkie_big_nohaplotig	exon	5666950	5667150	100	-	.	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 4336 4536 +
Chr2	stalkie_big_nohaplotig	exon	5667278	5667881	99	-	.	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 3732 4335 +
Chr2	stalkie_big_nohaplotig	exon	5667992	5668199	100	-	.	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 3524 3731 +
Chr2	stalkie_big_nohaplotig	exon	5668267	5668368	100	-	.	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 3422 3523 +
Chr2	stalkie_big_nohaplotig	exon	5668428	5669055	98	-	.	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 2794 3421 +
Chr2	stalkie_big_nohaplotig	exon	5669117	5669414	100	-	.	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 2496 2793 +
Chr2	stalkie_big_nohaplotig	exon	5669487	5669664	100	-	.	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 2318 2495 +
Chr2	stalkie_big_nohaplotig	exon	5669734	5669921	100	-	.	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 2130 2317 +
Chr2	stalkie_big_nohaplotig	exon	5669979	5670471	100	-	.	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 1637 2129 +
Chr2	stalkie_big_nohaplotig	exon	5670717	5671202	99	-	.	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 1151 1636 +
Chr2	stalkie_big_nohaplotig	exon	5671267	5671477	100	-	.	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 940 1150 +
Chr2	stalkie_big_nohaplotig	exon	5673323	5673549	99	-	.	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 713 939 +
Chr2	stalkie_big_nohaplotig	exon	5673649	5674360	99	-	.	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 1 712 +
Chr2	stalkie_big_nohaplotig	CDS	5666069	5666887	.	-	0	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 4537 5355 +
Chr2	stalkie_big_nohaplotig	CDS	5666950	5667150	.	-	0	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 4336 4536 +
Chr2	stalkie_big_nohaplotig	CDS	5667278	5667881	.	-	1	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 3732 4335 +
Chr2	stalkie_big_nohaplotig	CDS	5667992	5668199	.	-	2	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 3524 3731 +
Chr2	stalkie_big_nohaplotig	CDS	5668267	5668368	.	-	2	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 3422 3523 +
Chr2	stalkie_big_nohaplotig	CDS	5668428	5669055	.	-	0	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 2794 3421 +
Chr2	stalkie_big_nohaplotig	CDS	5669117	5669414	.	-	1	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 2496 2793 +
Chr2	stalkie_big_nohaplotig	CDS	5669487	5669664	.	-	2	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 2318 2495 +
Chr2	stalkie_big_nohaplotig	CDS	5669734	5669921	.	-	1	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 2130 2317 +
Chr2	stalkie_big_nohaplotig	CDS	5669979	5670471	.	-	2	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 1637 2129 +
Chr2	stalkie_big_nohaplotig	CDS	5670717	5671202	.	-	2	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 1151 1636 +
Chr2	stalkie_big_nohaplotig	CDS	5671267	5671477	.	-	0	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 940 1150 +
Chr2	stalkie_big_nohaplotig	CDS	5673323	5673549	.	-	2	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 713 939 +
Chr2	stalkie_big_nohaplotig	CDS	5673649	5674360	.	-	0	Parent=FBgn0040505.1.mrna1;Target=FBgn0040505.1 1 712 +
Chr2	gffcl	locus	5718761	5719778	.	+	.	ID=RLOC_00014335;geneIDs=comp152713_c0_seq1.path1;transcripts=comp152713_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5718761	5719778	.	+	.	ID=comp152713_c0_seq1.mrna1;geneID=comp152713_c0_seq1.path1;Name=comp152713_c0_seq1;Dir=indeterminatecoverage=98.7;identity=99.9;matches=1017;mismatches=1;indels=0;unknowns=0;Target=comp152713_c0_seq1 1018 1 .;CDS_Target=comp152713_c0_seq1 114 1 .;locus=RLOC_00014335
Chr2	stalkie_big_nohaplotig	exon	5718761	5719778	99	+	.	Parent=comp152713_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5718761	5718874	.	+	0	Parent=comp152713_c0_seq1.mrna1
Chr2	gffcl	locus	5719808	5720253	.	-	.	ID=RLOC_00014336;geneIDs=comp137909_c0_seq1.path1;transcripts=comp137909_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5719808	5720253	.	-	.	ID=comp137909_c0_seq1.mrna1;geneID=comp137909_c0_seq1.path1;Name=comp137909_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=444;mismatches=2;indels=1;unknowns=0;Target=comp137909_c0_seq1 447 1 .;CDS_Target=comp137909_c0_seq1 60 1 .;locus=RLOC_00014336
Chr2	stalkie_big_nohaplotig	exon	5719808	5720253	99	-	.	Parent=comp137909_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5720194	5720253	.	-	0	Parent=comp137909_c0_seq1.mrna1
Chr2	gffcl	locus	5720883	5721143	.	-	.	ID=RLOC_00014337;geneIDs=comp88825_c0_seq1.path1;transcripts=comp88825_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5720883	5721143	.	-	.	ID=comp88825_c0_seq1.mrna1;geneID=comp88825_c0_seq1.path1;Name=comp88825_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=260;mismatches=1;indels=0;unknowns=0;Target=comp88825_c0_seq1 261 1 .;CDS_Target=comp88825_c0_seq1 122 3 .;locus=RLOC_00014337
Chr2	stalkie_big_nohaplotig	exon	5720883	5721143	99	-	.	Parent=comp88825_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5721022	5721141	.	-	0	Parent=comp88825_c0_seq1.mrna1
Chr2	gffcl	locus	5723373	5723736	.	+	.	ID=RLOC_00014338;geneIDs=comp150217_c0_seq1.path1;transcripts=comp150217_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5723373	5723736	.	+	.	ID=comp150217_c0_seq1.mrna1;geneID=comp150217_c0_seq1.path1;Name=comp150217_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=362;mismatches=2;indels=0;unknowns=0;Target=comp150217_c0_seq1 364 1 .;CDS_Target=comp150217_c0_seq1 364 293 .;locus=RLOC_00014338
Chr2	stalkie_big_nohaplotig	exon	5723373	5723736	99	+	.	Parent=comp150217_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5723665	5723736	.	+	0	Parent=comp150217_c0_seq1.mrna1
Chr2	gffcl	locus	5724089	5725732	.	-	.	ID=RLOC_00014339;geneIDs=FBgn0020506.path1;transcripts=FBgn0020506.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5724089	5725732	.	-	.	ID=FBgn0020506.mrna1;geneID=FBgn0020506.path1;Name=FBgn0020506;Dir=sensecoverage=100.0;identity=99.8;matches=865;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014339
Chr2	stalkie_big_nohaplotig	exon	5724089	5724913	99	-	.	Parent=FBgn0020506.mrna1;Target=FBgn0020506 43 867 +
Chr2	stalkie_big_nohaplotig	exon	5725691	5725732	100	-	.	Parent=FBgn0020506.mrna1;Target=FBgn0020506 1 42 +
Chr2	stalkie_big_nohaplotig	CDS	5724089	5724913	.	-	0	Parent=FBgn0020506.mrna1;Target=FBgn0020506 43 867 +
Chr2	stalkie_big_nohaplotig	CDS	5725691	5725732	.	-	0	Parent=FBgn0020506.mrna1;Target=FBgn0020506 1 42 +
Chr2	gffcl	locus	5733366	5760597	.	-	.	ID=RLOC_00014340;geneIDs=FBgn0024315.1.path1,comp149698_c0_seq1.path1;transcripts=FBgn0024315.1.mrna1,comp149698_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5733366	5760597	.	-	.	ID=FBgn0024315.1.mrna1;geneID=FBgn0024315.1.path1;Name=FBgn0024315.1;Dir=sensecoverage=100.0;identity=99.7;matches=1565;mismatches=4;indels=0;unknowns=0;locus=RLOC_00014340
Chr2	stalkie_big_nohaplotig	exon	5733366	5733593	100	-	.	Parent=FBgn0024315.1.mrna1;Target=FBgn0024315.1 1342 1569 +
Chr2	stalkie_big_nohaplotig	exon	5733664	5733905	99	-	.	Parent=FBgn0024315.1.mrna1;Target=FBgn0024315.1 1100 1341 +
Chr2	stalkie_big_nohaplotig	exon	5734032	5734314	100	-	.	Parent=FBgn0024315.1.mrna1;Target=FBgn0024315.1 817 1099 +
Chr2	stalkie_big_nohaplotig	exon	5734440	5734913	99	-	.	Parent=FBgn0024315.1.mrna1;Target=FBgn0024315.1 343 816 +
Chr2	stalkie_big_nohaplotig	exon	5734989	5735078	97	-	.	Parent=FBgn0024315.1.mrna1;Target=FBgn0024315.1 253 342 +
Chr2	stalkie_big_nohaplotig	exon	5735138	5735316	100	-	.	Parent=FBgn0024315.1.mrna1;Target=FBgn0024315.1 74 252 +
Chr2	stalkie_big_nohaplotig	exon	5760525	5760597	100	-	.	Parent=FBgn0024315.1.mrna1;Target=FBgn0024315.1 1 73 +
Chr2	stalkie_big_nohaplotig	CDS	5733366	5733593	.	-	0	Parent=FBgn0024315.1.mrna1;Target=FBgn0024315.1 1342 1569 +
Chr2	stalkie_big_nohaplotig	CDS	5733664	5733905	.	-	2	Parent=FBgn0024315.1.mrna1;Target=FBgn0024315.1 1100 1341 +
Chr2	stalkie_big_nohaplotig	CDS	5734032	5734314	.	-	0	Parent=FBgn0024315.1.mrna1;Target=FBgn0024315.1 817 1099 +
Chr2	stalkie_big_nohaplotig	CDS	5734440	5734913	.	-	0	Parent=FBgn0024315.1.mrna1;Target=FBgn0024315.1 343 816 +
Chr2	stalkie_big_nohaplotig	CDS	5734989	5735078	.	-	0	Parent=FBgn0024315.1.mrna1;Target=FBgn0024315.1 253 342 +
Chr2	stalkie_big_nohaplotig	CDS	5735138	5735316	.	-	2	Parent=FBgn0024315.1.mrna1;Target=FBgn0024315.1 74 252 +
Chr2	stalkie_big_nohaplotig	CDS	5760525	5760597	.	-	0	Parent=FBgn0024315.1.mrna1;Target=FBgn0024315.1 1 73 +
Chr2	stalkie_big_nohaplotig	mRNA	5735251	5742985	.	-	.	ID=comp149698_c0_seq1.mrna1;geneID=comp149698_c0_seq1.path1;Name=comp149698_c0_seq1;Dir=sensecoverage=100.0;identity=98.9;matches=1008;mismatches=9;indels=2;unknowns=0;locus=RLOC_00014340
Chr2	stalkie_big_nohaplotig	exon	5735251	5735316	96	-	.	Parent=comp149698_c0_seq1.mrna1;Target=comp149698_c0_seq1 953 1018 +
Chr2	stalkie_big_nohaplotig	exon	5742034	5742985	99	-	.	Parent=comp149698_c0_seq1.mrna1;Target=comp149698_c0_seq1 1 952 +
Chr2	stalkie_big_nohaplotig	CDS	5735252	5735316	.	-	2	Parent=comp149698_c0_seq1.mrna1;Target=comp149698_c0_seq1 953 1017 +
Chr2	stalkie_big_nohaplotig	CDS	5742034	5742136	.	-	0	Parent=comp149698_c0_seq1.mrna1;Target=comp149698_c0_seq1 850 952 +
Chr2	gffcl	locus	5805445	5806231	.	+	.	ID=RLOC_00014341;geneIDs=comp147402_c0_seq1.path1;transcripts=comp147402_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5805445	5806231	.	+	.	ID=comp147402_c0_seq1.mrna1;geneID=comp147402_c0_seq1.path1;Name=comp147402_c0_seq1;Dir=indeterminatecoverage=97.5;identity=99.4;matches=783;mismatches=4;indels=1;unknowns=0;Target=comp147402_c0_seq1 802 15 .;CDS_Target=comp147402_c0_seq1 353 165 .;locus=RLOC_00014341
Chr2	stalkie_big_nohaplotig	exon	5805445	5806231	99	+	.	Parent=comp147402_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5805595	5805783	.	+	0	Parent=comp147402_c0_seq1.mrna1
Chr2	gffcl	locus	5806930	5807643	.	+	.	ID=RLOC_00014342;geneIDs=comp131686_c1_seq1.path1;transcripts=comp131686_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5806930	5807643	.	+	.	ID=comp131686_c1_seq1.mrna1;geneID=comp131686_c1_seq1.path1;Name=comp131686_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=695;mismatches=9;indels=10;unknowns=0;Target=comp131686_c1_seq1 704 1 .;CDS_Target=comp131686_c1_seq1 487 371 .;locus=RLOC_00014342
Chr2	stalkie_big_nohaplotig	exon	5806930	5807643	97	+	.	Parent=comp131686_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5807309	5807425	.	+	0	Parent=comp131686_c1_seq1.mrna1
Chr2	gffcl	locus	5815862	5816636	.	-	.	ID=RLOC_00014343;geneIDs=comp113669_c0_seq1.path1;transcripts=comp113669_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5815862	5816636	.	-	.	ID=comp113669_c0_seq1.mrna1;geneID=comp113669_c0_seq1.path1;Name=comp113669_c0_seq1;Dir=sensecoverage=100.0;identity=98.7;matches=706;mismatches=8;indels=1;unknowns=0;locus=RLOC_00014343
Chr2	stalkie_big_nohaplotig	exon	5815862	5816041	98	-	.	Parent=comp113669_c0_seq1.mrna1;Target=comp113669_c0_seq1 536 714 +
Chr2	stalkie_big_nohaplotig	exon	5816102	5816636	98	-	.	Parent=comp113669_c0_seq1.mrna1;Target=comp113669_c0_seq1 1 535 +
Chr2	stalkie_big_nohaplotig	CDS	5816029	5816041	.	-	1	Parent=comp113669_c0_seq1.mrna1;Target=comp113669_c0_seq1 536 548 +
Chr2	stalkie_big_nohaplotig	CDS	5816102	5816277	.	-	0	Parent=comp113669_c0_seq1.mrna1;Target=comp113669_c0_seq1 360 535 +
Chr2	gffcl	locus	5867947	5868181	.	+	.	ID=RLOC_00014344;geneIDs=comp109925_c0_seq1.path1;transcripts=comp109925_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5867947	5868181	.	+	.	ID=comp109925_c0_seq1.mrna1;geneID=comp109925_c0_seq1.path1;Name=comp109925_c0_seq1;Dir=indeterminatecoverage=95.9;identity=98.3;matches=231;mismatches=4;indels=0;unknowns=0;Target=comp109925_c0_seq1 235 1 .;CDS_Target=comp109925_c0_seq1 206 3 .;locus=RLOC_00014344
Chr2	stalkie_big_nohaplotig	exon	5867947	5868181	98	+	.	Parent=comp109925_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5867949	5868152	.	+	0	Parent=comp109925_c0_seq1.mrna1
Chr2	gffcl	locus	5871816	5872422	.	-	.	ID=RLOC_00014345;geneIDs=comp154182_c0_seq1.path1;transcripts=comp154182_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5871816	5872422	.	-	.	ID=comp154182_c0_seq1.mrna1;geneID=comp154182_c0_seq1.path1;Name=comp154182_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.3;matches=603;mismatches=4;indels=0;unknowns=0;Target=comp154182_c0_seq1 609 3 .;CDS_Target=comp154182_c0_seq1 335 210 .;locus=RLOC_00014345
Chr2	stalkie_big_nohaplotig	exon	5871816	5872422	99	-	.	Parent=comp154182_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5872090	5872215	.	-	0	Parent=comp154182_c0_seq1.mrna1
Chr2	gffcl	locus	5883037	5961389	.	+	.	ID=RLOC_00014346;geneIDs=FBgn0050463.1.path1,comp149293_c2_seq1.path1;transcripts=FBgn0050463.1.mrna1,comp149293_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5883037	5961389	.	+	.	ID=FBgn0050463.1.mrna1;geneID=FBgn0050463.1.path1;Name=FBgn0050463.1;Dir=sensecoverage=100.0;identity=99.6;matches=2098;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014346
Chr2	stalkie_big_nohaplotig	exon	5883037	5883589	99	+	.	Parent=FBgn0050463.1.mrna1;Target=FBgn0050463.1 1 553 +
Chr2	stalkie_big_nohaplotig	exon	5894248	5894440	99	+	.	Parent=FBgn0050463.1.mrna1;Target=FBgn0050463.1 554 746 +
Chr2	stalkie_big_nohaplotig	exon	5894665	5894834	100	+	.	Parent=FBgn0050463.1.mrna1;Target=FBgn0050463.1 747 916 +
Chr2	stalkie_big_nohaplotig	exon	5895227	5895391	100	+	.	Parent=FBgn0050463.1.mrna1;Target=FBgn0050463.1 917 1081 +
Chr2	stalkie_big_nohaplotig	exon	5904031	5904224	100	+	.	Parent=FBgn0050463.1.mrna1;Target=FBgn0050463.1 1082 1275 +
Chr2	stalkie_big_nohaplotig	exon	5947103	5947321	99	+	.	Parent=FBgn0050463.1.mrna1;Target=FBgn0050463.1 1276 1494 +
Chr2	stalkie_big_nohaplotig	exon	5949978	5950120	99	+	.	Parent=FBgn0050463.1.mrna1;Target=FBgn0050463.1 1495 1637 +
Chr2	stalkie_big_nohaplotig	exon	5951408	5951498	100	+	.	Parent=FBgn0050463.1.mrna1;Target=FBgn0050463.1 1638 1728 +
Chr2	stalkie_big_nohaplotig	exon	5951646	5951756	100	+	.	Parent=FBgn0050463.1.mrna1;Target=FBgn0050463.1 1729 1839 +
Chr2	stalkie_big_nohaplotig	exon	5959180	5959287	99	+	.	Parent=FBgn0050463.1.mrna1;Target=FBgn0050463.1 1840 1947 +
Chr2	stalkie_big_nohaplotig	exon	5961231	5961389	99	+	.	Parent=FBgn0050463.1.mrna1;Target=FBgn0050463.1 1948 2106 +
Chr2	stalkie_big_nohaplotig	CDS	5883037	5883589	.	+	0	Parent=FBgn0050463.1.mrna1;Target=FBgn0050463.1 1 553 +
Chr2	stalkie_big_nohaplotig	CDS	5894248	5894440	.	+	2	Parent=FBgn0050463.1.mrna1;Target=FBgn0050463.1 554 746 +
Chr2	stalkie_big_nohaplotig	CDS	5894665	5894834	.	+	1	Parent=FBgn0050463.1.mrna1;Target=FBgn0050463.1 747 916 +
Chr2	stalkie_big_nohaplotig	CDS	5895227	5895391	.	+	2	Parent=FBgn0050463.1.mrna1;Target=FBgn0050463.1 917 1081 +
Chr2	stalkie_big_nohaplotig	CDS	5904031	5904224	.	+	2	Parent=FBgn0050463.1.mrna1;Target=FBgn0050463.1 1082 1275 +
Chr2	stalkie_big_nohaplotig	CDS	5947103	5947321	.	+	0	Parent=FBgn0050463.1.mrna1;Target=FBgn0050463.1 1276 1494 +
Chr2	stalkie_big_nohaplotig	CDS	5949978	5950120	.	+	0	Parent=FBgn0050463.1.mrna1;Target=FBgn0050463.1 1495 1637 +
Chr2	stalkie_big_nohaplotig	CDS	5951408	5951498	.	+	1	Parent=FBgn0050463.1.mrna1;Target=FBgn0050463.1 1638 1728 +
Chr2	stalkie_big_nohaplotig	CDS	5951646	5951756	.	+	0	Parent=FBgn0050463.1.mrna1;Target=FBgn0050463.1 1729 1839 +
Chr2	stalkie_big_nohaplotig	CDS	5959180	5959287	.	+	0	Parent=FBgn0050463.1.mrna1;Target=FBgn0050463.1 1840 1947 +
Chr2	stalkie_big_nohaplotig	CDS	5961231	5961389	.	+	0	Parent=FBgn0050463.1.mrna1;Target=FBgn0050463.1 1948 2106 +
Chr2	stalkie_big_nohaplotig	mRNA	5958509	5959199	.	+	.	ID=comp149293_c2_seq1.mrna1;geneID=comp149293_c2_seq1.path1;Name=comp149293_c2_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=680;mismatches=5;indels=10;unknowns=0;Target=comp149293_c2_seq1 689 1 .;CDS_Target=comp149293_c2_seq1 666 460 .;locus=RLOC_00014346
Chr2	stalkie_big_nohaplotig	exon	5958509	5959199	97	+	.	Parent=comp149293_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5958964	5959176	.	+	0	Parent=comp149293_c2_seq1.mrna1
Chr2	gffcl	locus	5914223	5917096	.	-	.	ID=RLOC_00014347;geneIDs=FBgn0013763.1.path1;transcripts=FBgn0013763.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5914223	5917096	.	-	.	ID=FBgn0013763.1.mrna1;geneID=FBgn0013763.1.path1;Name=FBgn0013763.1;Dir=sensecoverage=100.0;identity=99.4;matches=1354;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014347
Chr2	stalkie_big_nohaplotig	exon	5914223	5914872	99	-	.	Parent=FBgn0013763.1.mrna1;Target=FBgn0013763.1 713 1362 +
Chr2	stalkie_big_nohaplotig	exon	5914928	5915503	99	-	.	Parent=FBgn0013763.1.mrna1;Target=FBgn0013763.1 137 712 +
Chr2	stalkie_big_nohaplotig	exon	5916961	5917096	100	-	.	Parent=FBgn0013763.1.mrna1;Target=FBgn0013763.1 1 136 +
Chr2	stalkie_big_nohaplotig	CDS	5914223	5914872	.	-	2	Parent=FBgn0013763.1.mrna1;Target=FBgn0013763.1 713 1362 +
Chr2	stalkie_big_nohaplotig	CDS	5914928	5915503	.	-	2	Parent=FBgn0013763.1.mrna1;Target=FBgn0013763.1 137 712 +
Chr2	stalkie_big_nohaplotig	CDS	5916961	5917096	.	-	0	Parent=FBgn0013763.1.mrna1;Target=FBgn0013763.1 1 136 +
Chr2	gffcl	locus	5952092	5953546	.	-	.	ID=RLOC_00014348;geneIDs=comp157164_c0_seq1.path1;transcripts=comp157164_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5952092	5953546	.	-	.	ID=comp157164_c0_seq1.mrna1;geneID=comp157164_c0_seq1.path1;Name=comp157164_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=1417;mismatches=38;indels=11;unknowns=0;Target=comp157164_c0_seq1 1466 1 .;CDS_Target=comp157164_c0_seq1 318 307 .;locus=RLOC_00014348
Chr2	stalkie_big_nohaplotig	exon	5952092	5953546	96	-	.	Parent=comp157164_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5953234	5953245	.	-	0	Parent=comp157164_c0_seq1.mrna1
Chr2	gffcl	locus	5956482	5957759	.	-	.	ID=RLOC_00014349;geneIDs=comp160841_c0_seq1.path1;transcripts=comp160841_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5956482	5957759	.	-	.	ID=comp160841_c0_seq1.mrna1;geneID=comp160841_c0_seq1.path1;Name=comp160841_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.4;matches=1230;mismatches=48;indels=11;unknowns=0;Target=comp160841_c0_seq1 1289 1 .;CDS_Target=comp160841_c0_seq1 566 462 .;locus=RLOC_00014349
Chr2	stalkie_big_nohaplotig	exon	5956482	5957759	95	-	.	Parent=comp160841_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5957204	5957308	.	-	0	Parent=comp160841_c0_seq1.mrna1
Chr2	gffcl	locus	5964409	5965021	.	+	.	ID=RLOC_00014350;geneIDs=comp157246_c0_seq1.path1;transcripts=comp157246_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5964409	5965021	.	+	.	ID=comp157246_c0_seq1.mrna1;geneID=comp157246_c0_seq1.path1;Name=comp157246_c0_seq1;Dir=indeterminatecoverage=94.5;identity=92.2;matches=595;mismatches=13;indels=37;unknowns=0;Target=comp157246_c0_seq1 677 38 .;CDS_Target=comp157246_c0_seq1 654 598 .;locus=RLOC_00014350
Chr2	stalkie_big_nohaplotig	exon	5964409	5965021	92	+	.	Parent=comp157246_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5964942	5964998	.	+	0	Parent=comp157246_c0_seq1.mrna1
Chr2	gffcl	locus	5971451	5972233	.	-	.	ID=RLOC_00014351;geneIDs=FBgn0085487.1.path1;transcripts=FBgn0085487.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5971451	5972233	.	-	.	ID=FBgn0085487.1.mrna1;geneID=FBgn0085487.1.path1;Name=FBgn0085487.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=780;mismatches=3;indels=0;unknowns=0;Target=FBgn0085487.1 783 1 .;locus=RLOC_00014351
Chr2	stalkie_big_nohaplotig	exon	5971451	5972233	99	-	.	Parent=FBgn0085487.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5971451	5972233	.	-	0	Parent=FBgn0085487.1.mrna1
Chr2	gffcl	locus	5972710	5974826	.	-	.	ID=RLOC_00014352;geneIDs=FBgn0085486.3.path1;transcripts=FBgn0085486.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5972710	5974826	.	-	.	ID=FBgn0085486.3.mrna1;geneID=FBgn0085486.3.path1;Name=FBgn0085486.3;Dir=sensecoverage=100.0;identity=99.7;matches=978;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014352
Chr2	stalkie_big_nohaplotig	exon	5972710	5972862	99	-	.	Parent=FBgn0085486.3.mrna1;Target=FBgn0085486.3 829 981 +
Chr2	stalkie_big_nohaplotig	exon	5973805	5973891	98	-	.	Parent=FBgn0085486.3.mrna1;Target=FBgn0085486.3 742 828 +
Chr2	stalkie_big_nohaplotig	exon	5973953	5974054	100	-	.	Parent=FBgn0085486.3.mrna1;Target=FBgn0085486.3 640 741 +
Chr2	stalkie_big_nohaplotig	exon	5974126	5974638	99	-	.	Parent=FBgn0085486.3.mrna1;Target=FBgn0085486.3 127 639 +
Chr2	stalkie_big_nohaplotig	exon	5974701	5974826	100	-	.	Parent=FBgn0085486.3.mrna1;Target=FBgn0085486.3 1 126 +
Chr2	stalkie_big_nohaplotig	CDS	5972710	5972862	.	-	0	Parent=FBgn0085486.3.mrna1;Target=FBgn0085486.3 829 981 +
Chr2	stalkie_big_nohaplotig	CDS	5973805	5973891	.	-	0	Parent=FBgn0085486.3.mrna1;Target=FBgn0085486.3 742 828 +
Chr2	stalkie_big_nohaplotig	CDS	5973953	5974054	.	-	0	Parent=FBgn0085486.3.mrna1;Target=FBgn0085486.3 640 741 +
Chr2	stalkie_big_nohaplotig	CDS	5974126	5974638	.	-	0	Parent=FBgn0085486.3.mrna1;Target=FBgn0085486.3 127 639 +
Chr2	stalkie_big_nohaplotig	CDS	5974701	5974826	.	-	0	Parent=FBgn0085486.3.mrna1;Target=FBgn0085486.3 1 126 +
Chr2	gffcl	locus	5976025	6116066	.	.	.	ID=RLOC_00014353;geneIDs=comp138603_c1_seq1.path1,comp162809_c0_seq1.path1;transcripts=comp138603_c1_seq1.mrna1,comp162809_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5976025	6116066	.	+	.	ID=comp138603_c1_seq1.mrna1;geneID=comp138603_c1_seq1.path1;Name=comp138603_c1_seq1;Dir=indeterminatecoverage=97.6;identity=96.4;matches=935;mismatches=25;indels=10;unknowns=0;Target=comp138603_c1_seq1 956 944 .;locus=RLOC_00014353
Chr2	stalkie_big_nohaplotig	exon	5976025	5976192	97	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 190 23 .
Chr2	stalkie_big_nohaplotig	exon	5976270	5976425	97	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 345 191 .
Chr2	stalkie_big_nohaplotig	exon	5976512	5976630	95	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 464 346 .
Chr2	stalkie_big_nohaplotig	exon	5976702	5976787	89	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 541 465 .
Chr2	stalkie_big_nohaplotig	exon	5984271	5984448	98	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 719 542 .
Chr2	stalkie_big_nohaplotig	exon	5985783	5985787	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 724 720 .
Chr2	stalkie_big_nohaplotig	exon	5987204	5987213	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 734 725 .
Chr2	stalkie_big_nohaplotig	exon	5991503	5991510	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 747 740 .
Chr2	stalkie_big_nohaplotig	exon	5992635	5992643	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 775 767 .
Chr2	stalkie_big_nohaplotig	exon	5992676	5992677	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 802 801 .
Chr2	stalkie_big_nohaplotig	exon	5999688	5999699	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 814 803 .
Chr2	stalkie_big_nohaplotig	exon	5999816	5999820	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 825 821 .
Chr2	stalkie_big_nohaplotig	exon	6013580	6013589	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 835 826 .
Chr2	stalkie_big_nohaplotig	exon	6017773	6017777	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 845 841 .
Chr2	stalkie_big_nohaplotig	exon	6019679	6019689	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 856 846 .
Chr2	stalkie_big_nohaplotig	exon	6020573	6020580	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 866 859 .
Chr2	stalkie_big_nohaplotig	exon	6020609	6020612	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 890 887 .
Chr2	stalkie_big_nohaplotig	exon	6021832	6021835	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 894 891 .
Chr2	stalkie_big_nohaplotig	exon	6027665	6027671	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 901 895 .
Chr2	stalkie_big_nohaplotig	exon	6029335	6029344	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 911 902 .
Chr2	stalkie_big_nohaplotig	exon	6030554	6030556	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 926 924 .
Chr2	stalkie_big_nohaplotig	exon	6031117	6031122	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 932 927 .
Chr2	stalkie_big_nohaplotig	exon	6044529	6044535	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 939 933 .
Chr2	stalkie_big_nohaplotig	exon	6050244	6050247	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 943 940 .
Chr2	stalkie_big_nohaplotig	exon	6052791	6052803	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 956 944 .
Chr2	stalkie_big_nohaplotig	exon	6056498	6056502	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 993 989 .
Chr2	stalkie_big_nohaplotig	exon	6061586	6061589	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 997 994 .
Chr2	stalkie_big_nohaplotig	exon	6065042	6065043	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 999 998 .
Chr2	stalkie_big_nohaplotig	exon	6077836	6077840	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 1004 1000 .
Chr2	stalkie_big_nohaplotig	exon	6079952	6079958	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 1011 1005 .
Chr2	stalkie_big_nohaplotig	exon	6080705	6080707	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 1014 1012 .
Chr2	stalkie_big_nohaplotig	exon	6083778	6083783	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 1020 1015 .
Chr2	stalkie_big_nohaplotig	exon	6095177	6095179	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 1024 1022 .
Chr2	stalkie_big_nohaplotig	exon	6099963	6099971	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 1033 1025 .
Chr2	stalkie_big_nohaplotig	exon	6103478	6103483	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 1039 1034 .
Chr2	stalkie_big_nohaplotig	exon	6106338	6106345	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 1047 1040 .
Chr2	stalkie_big_nohaplotig	exon	6110243	6110245	100	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 1056 1054 .
Chr2	stalkie_big_nohaplotig	exon	6116010	6116066	82	+	.	Parent=comp138603_c1_seq1.mrna1;Target=comp138603_c1_seq1 1113 1057 .
Chr2	stalkie_big_nohaplotig	CDS	6052791	6052803	.	+	0	Parent=comp138603_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	5991095	5993419	.	-	.	ID=comp162809_c0_seq1.mrna1;geneID=comp162809_c0_seq1.path1;Name=comp162809_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=2288;mismatches=31;indels=31;unknowns=0;Target=comp162809_c0_seq1 2344 1 .;CDS_Target=comp162809_c0_seq1 1790 1557 .;locus=RLOC_00014353
Chr2	stalkie_big_nohaplotig	exon	5991095	5993419	97	-	.	Parent=comp162809_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	5991652	5991885	.	-	0	Parent=comp162809_c0_seq1.mrna1
Chr2	gffcl	locus	6000574	6001219	.	-	.	ID=RLOC_00014354;geneIDs=comp149577_c0_seq1.path1;transcripts=comp149577_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6000574	6001219	.	-	.	ID=comp149577_c0_seq1.mrna1;geneID=comp149577_c0_seq1.path1;Name=comp149577_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=633;mismatches=12;indels=1;unknowns=0;Target=comp149577_c0_seq1 645 1 .;CDS_Target=comp149577_c0_seq1 590 279 .;locus=RLOC_00014354
Chr2	stalkie_big_nohaplotig	exon	6000574	6001219	97	-	.	Parent=comp149577_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	6000629	6000940	.	-	0	Parent=comp149577_c0_seq1.mrna1
Chr2	gffcl	locus	6007382	6009316	.	-	.	ID=RLOC_00014355;geneIDs=FBgn0034646.2.path1;transcripts=FBgn0034646.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6007382	6009316	.	-	.	ID=FBgn0034646.2.mrna1;geneID=FBgn0034646.2.path1;Name=FBgn0034646.2;Dir=sensecoverage=100.0;identity=99.5;matches=1089;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014355
Chr2	stalkie_big_nohaplotig	exon	6007382	6007462	100	-	.	Parent=FBgn0034646.2.mrna1;Target=FBgn0034646.2 1015 1095 +
Chr2	stalkie_big_nohaplotig	exon	6007531	6007853	99	-	.	Parent=FBgn0034646.2.mrna1;Target=FBgn0034646.2 692 1014 +
Chr2	stalkie_big_nohaplotig	exon	6008561	6008783	98	-	.	Parent=FBgn0034646.2.mrna1;Target=FBgn0034646.2 469 691 +
Chr2	stalkie_big_nohaplotig	exon	6008849	6009316	100	-	.	Parent=FBgn0034646.2.mrna1;Target=FBgn0034646.2 1 468 +
Chr2	stalkie_big_nohaplotig	CDS	6007382	6007462	.	-	0	Parent=FBgn0034646.2.mrna1;Target=FBgn0034646.2 1015 1095 +
Chr2	stalkie_big_nohaplotig	CDS	6007531	6007853	.	-	2	Parent=FBgn0034646.2.mrna1;Target=FBgn0034646.2 692 1014 +
Chr2	stalkie_big_nohaplotig	CDS	6008561	6008783	.	-	0	Parent=FBgn0034646.2.mrna1;Target=FBgn0034646.2 469 691 +
Chr2	stalkie_big_nohaplotig	CDS	6008849	6009316	.	-	0	Parent=FBgn0034646.2.mrna1;Target=FBgn0034646.2 1 468 +
Chr2	gffcl	locus	6023393	6024700	.	-	.	ID=RLOC_00014356;geneIDs=comp143211_c0_seq1.path1;transcripts=comp143211_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6023393	6024700	.	-	.	ID=comp143211_c0_seq1.mrna1;geneID=comp143211_c0_seq1.path1;Name=comp143211_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1297;mismatches=11;indels=2;unknowns=0;Target=comp143211_c0_seq1 1310 1 .;CDS_Target=comp143211_c0_seq1 269 87 .;locus=RLOC_00014356
Chr2	stalkie_big_nohaplotig	exon	6023393	6024700	99	-	.	Parent=comp143211_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	6024432	6024614	.	-	0	Parent=comp143211_c0_seq1.mrna1
Chr2	gffcl	locus	6053168	6054629	.	+	.	ID=RLOC_00014357;geneIDs=FBgn0021825.1.path1;transcripts=FBgn0021825.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6053168	6054629	.	+	.	ID=FBgn0021825.1.mrna1;geneID=FBgn0021825.1.path1;Name=FBgn0021825.1;Dir=sensecoverage=100.0;identity=99.2;matches=1155;mismatches=9;indels=0;unknowns=0;locus=RLOC_00014357
Chr2	stalkie_big_nohaplotig	exon	6053168	6053224	100	+	.	Parent=FBgn0021825.1.mrna1;Target=FBgn0021825.1 1 57 +
Chr2	stalkie_big_nohaplotig	exon	6053403	6053886	98	+	.	Parent=FBgn0021825.1.mrna1;Target=FBgn0021825.1 58 541 +
Chr2	stalkie_big_nohaplotig	exon	6053947	6054387	99	+	.	Parent=FBgn0021825.1.mrna1;Target=FBgn0021825.1 542 982 +
Chr2	stalkie_big_nohaplotig	exon	6054448	6054629	99	+	.	Parent=FBgn0021825.1.mrna1;Target=FBgn0021825.1 983 1164 +
Chr2	stalkie_big_nohaplotig	CDS	6053168	6053224	.	+	0	Parent=FBgn0021825.1.mrna1;Target=FBgn0021825.1 1 57 +
Chr2	stalkie_big_nohaplotig	CDS	6053403	6053886	.	+	0	Parent=FBgn0021825.1.mrna1;Target=FBgn0021825.1 58 541 +
Chr2	stalkie_big_nohaplotig	CDS	6053947	6054387	.	+	2	Parent=FBgn0021825.1.mrna1;Target=FBgn0021825.1 542 982 +
Chr2	stalkie_big_nohaplotig	CDS	6054448	6054629	.	+	2	Parent=FBgn0021825.1.mrna1;Target=FBgn0021825.1 983 1164 +
Chr2	gffcl	locus	6059905	6076726	.	-	.	ID=RLOC_00014358;geneIDs=FBgn0034155.1.path1,comp102721_c0_seq1.path1;transcripts=FBgn0034155.1.mrna1,comp102721_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6059905	6076726	.	-	.	ID=FBgn0034155.1.mrna1;geneID=FBgn0034155.1.path1;Name=FBgn0034155.1;Dir=sensecoverage=100.0;identity=99.7;matches=5056;mismatches=14;indels=0;unknowns=0;locus=RLOC_00014358
Chr2	stalkie_big_nohaplotig	exon	6059905	6059998	100	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 4977 5070 +
Chr2	stalkie_big_nohaplotig	exon	6060064	6060165	100	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 4875 4976 +
Chr2	stalkie_big_nohaplotig	exon	6061652	6061788	100	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 4738 4874 +
Chr2	stalkie_big_nohaplotig	exon	6061859	6062048	100	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 4548 4737 +
Chr2	stalkie_big_nohaplotig	exon	6062450	6062561	100	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 4436 4547 +
Chr2	stalkie_big_nohaplotig	exon	6062637	6063029	99	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 4043 4435 +
Chr2	stalkie_big_nohaplotig	exon	6063193	6063382	99	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 3853 4042 +
Chr2	stalkie_big_nohaplotig	exon	6063454	6063816	99	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 3490 3852 +
Chr2	stalkie_big_nohaplotig	exon	6063887	6064183	99	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 3193 3489 +
Chr2	stalkie_big_nohaplotig	exon	6064249	6064339	100	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 3102 3192 +
Chr2	stalkie_big_nohaplotig	exon	6064404	6064581	100	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 2924 3101 +
Chr2	stalkie_big_nohaplotig	exon	6064681	6064834	100	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 2770 2923 +
Chr2	stalkie_big_nohaplotig	exon	6064894	6065149	100	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 2514 2769 +
Chr2	stalkie_big_nohaplotig	exon	6068954	6069144	100	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 2323 2513 +
Chr2	stalkie_big_nohaplotig	exon	6069208	6069374	98	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 2156 2322 +
Chr2	stalkie_big_nohaplotig	exon	6069840	6069954	100	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 2041 2155 +
Chr2	stalkie_big_nohaplotig	exon	6070026	6070687	99	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 1379 2040 +
Chr2	stalkie_big_nohaplotig	exon	6070745	6070876	99	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 1247 1378 +
Chr2	stalkie_big_nohaplotig	exon	6073031	6073072	100	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 1205 1246 +
Chr2	stalkie_big_nohaplotig	exon	6073242	6073381	100	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 1065 1204 +
Chr2	stalkie_big_nohaplotig	exon	6073482	6073645	100	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 901 1064 +
Chr2	stalkie_big_nohaplotig	exon	6075165	6075167	100	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 898 900 +
Chr2	stalkie_big_nohaplotig	exon	6075461	6075716	99	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 642 897 +
Chr2	stalkie_big_nohaplotig	exon	6075819	6076003	100	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 457 641 +
Chr2	stalkie_big_nohaplotig	exon	6076067	6076306	98	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 217 456 +
Chr2	stalkie_big_nohaplotig	exon	6076409	6076491	100	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 134 216 +
Chr2	stalkie_big_nohaplotig	exon	6076594	6076726	99	-	.	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 1 133 +
Chr2	stalkie_big_nohaplotig	CDS	6059905	6059998	.	-	1	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 4977 5070 +
Chr2	stalkie_big_nohaplotig	CDS	6060064	6060165	.	-	1	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 4875 4976 +
Chr2	stalkie_big_nohaplotig	CDS	6061652	6061788	.	-	0	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 4738 4874 +
Chr2	stalkie_big_nohaplotig	CDS	6061859	6062048	.	-	1	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 4548 4737 +
Chr2	stalkie_big_nohaplotig	CDS	6062450	6062561	.	-	2	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 4436 4547 +
Chr2	stalkie_big_nohaplotig	CDS	6062637	6063029	.	-	2	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 4043 4435 +
Chr2	stalkie_big_nohaplotig	CDS	6063193	6063382	.	-	0	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 3853 4042 +
Chr2	stalkie_big_nohaplotig	CDS	6063454	6063816	.	-	0	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 3490 3852 +
Chr2	stalkie_big_nohaplotig	CDS	6063887	6064183	.	-	0	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 3193 3489 +
Chr2	stalkie_big_nohaplotig	CDS	6064249	6064339	.	-	1	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 3102 3192 +
Chr2	stalkie_big_nohaplotig	CDS	6064404	6064581	.	-	2	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 2924 3101 +
Chr2	stalkie_big_nohaplotig	CDS	6064681	6064834	.	-	0	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 2770 2923 +
Chr2	stalkie_big_nohaplotig	CDS	6064894	6065149	.	-	1	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 2514 2769 +
Chr2	stalkie_big_nohaplotig	CDS	6068954	6069144	.	-	0	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 2323 2513 +
Chr2	stalkie_big_nohaplotig	CDS	6069208	6069374	.	-	2	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 2156 2322 +
Chr2	stalkie_big_nohaplotig	CDS	6069840	6069954	.	-	0	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 2041 2155 +
Chr2	stalkie_big_nohaplotig	CDS	6070026	6070687	.	-	2	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 1379 2040 +
Chr2	stalkie_big_nohaplotig	CDS	6070745	6070876	.	-	2	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 1247 1378 +
Chr2	stalkie_big_nohaplotig	CDS	6073031	6073072	.	-	2	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 1205 1246 +
Chr2	stalkie_big_nohaplotig	CDS	6073242	6073381	.	-	1	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 1065 1204 +
Chr2	stalkie_big_nohaplotig	CDS	6073482	6073645	.	-	0	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 901 1064 +
Chr2	stalkie_big_nohaplotig	CDS	6075165	6075167	.	-	0	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 898 900 +
Chr2	stalkie_big_nohaplotig	CDS	6075461	6075716	.	-	1	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 642 897 +
Chr2	stalkie_big_nohaplotig	CDS	6075819	6076003	.	-	0	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 457 641 +
Chr2	stalkie_big_nohaplotig	CDS	6076067	6076306	.	-	0	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 217 456 +
Chr2	stalkie_big_nohaplotig	CDS	6076409	6076491	.	-	2	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 134 216 +
Chr2	stalkie_big_nohaplotig	CDS	6076594	6076726	.	-	0	Parent=FBgn0034155.1.mrna1;Target=FBgn0034155.1 1 133 +
Chr2	stalkie_big_nohaplotig	mRNA	6065127	6068977	.	-	.	ID=comp102721_c0_seq1.mrna1;geneID=comp102721_c0_seq1.path1;Name=comp102721_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=362;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014358
Chr2	stalkie_big_nohaplotig	exon	6065127	6065149	100	-	.	Parent=comp102721_c0_seq1.mrna1;Target=comp102721_c0_seq1 1 23 -
Chr2	stalkie_big_nohaplotig	exon	6068026	6068340	100	-	.	Parent=comp102721_c0_seq1.mrna1;Target=comp102721_c0_seq1 24 338 -
Chr2	stalkie_big_nohaplotig	exon	6068954	6068977	100	-	.	Parent=comp102721_c0_seq1.mrna1;Target=comp102721_c0_seq1 339 362 -
Chr2	stalkie_big_nohaplotig	CDS	6065128	6065149	.	-	1	Parent=comp102721_c0_seq1.mrna1;Target=comp102721_c0_seq1 2 23 .
Chr2	stalkie_big_nohaplotig	CDS	6068026	6068340	.	-	1	Parent=comp102721_c0_seq1.mrna1;Target=comp102721_c0_seq1 24 338 .
Chr2	stalkie_big_nohaplotig	CDS	6068954	6068976	.	-	0	Parent=comp102721_c0_seq1.mrna1;Target=comp102721_c0_seq1 339 361 .
Chr2	gffcl	locus	6103950	6105057	.	+	.	ID=RLOC_00014359;geneIDs=comp157700_c0_seq1.path1;transcripts=comp157700_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6103950	6105057	.	+	.	ID=comp157700_c0_seq1.mrna1;geneID=comp157700_c0_seq1.path1;Name=comp157700_c0_seq1;Dir=indeterminatecoverage=99.3;identity=98.7;matches=1095;mismatches=13;indels=1;unknowns=0;Target=comp157700_c0_seq1 1110 2 .;CDS_Target=comp157700_c0_seq1 671 3 .;locus=RLOC_00014359
Chr2	stalkie_big_nohaplotig	exon	6103950	6105057	98	+	.	Parent=comp157700_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	6103951	6104619	.	+	0	Parent=comp157700_c0_seq1.mrna1
Chr2	gffcl	locus	6107067	6107622	.	-	.	ID=RLOC_00014360;geneIDs=comp150531_c0_seq1.path1;transcripts=comp150531_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6107067	6107622	.	-	.	ID=comp150531_c0_seq1.mrna1;geneID=comp150531_c0_seq1.path1;Name=comp150531_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=550;mismatches=6;indels=0;unknowns=0;Target=comp150531_c0_seq1 556 1 .;CDS_Target=comp150531_c0_seq1 403 311 .;locus=RLOC_00014360
Chr2	stalkie_big_nohaplotig	exon	6107067	6107622	98	-	.	Parent=comp150531_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	6107220	6107312	.	-	0	Parent=comp150531_c0_seq1.mrna1
Chr2	gffcl	locus	6109304	6110161	.	-	.	ID=RLOC_00014361;geneIDs=FBgn0010213.1.path1;transcripts=FBgn0010213.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6109304	6110161	.	-	.	ID=FBgn0010213.1.mrna1;geneID=FBgn0010213.1.path1;Name=FBgn0010213.1;Dir=sensecoverage=100.0;identity=99.9;matches=713;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014361
Chr2	stalkie_big_nohaplotig	exon	6109304	6109452	100	-	.	Parent=FBgn0010213.1.mrna1;Target=FBgn0010213.1 566 714 +
Chr2	stalkie_big_nohaplotig	exon	6109508	6109971	99	-	.	Parent=FBgn0010213.1.mrna1;Target=FBgn0010213.1 102 565 +
Chr2	stalkie_big_nohaplotig	exon	6110061	6110161	100	-	.	Parent=FBgn0010213.1.mrna1;Target=FBgn0010213.1 1 101 +
Chr2	stalkie_big_nohaplotig	CDS	6109304	6109452	.	-	2	Parent=FBgn0010213.1.mrna1;Target=FBgn0010213.1 566 714 +
Chr2	stalkie_big_nohaplotig	CDS	6109508	6109971	.	-	1	Parent=FBgn0010213.1.mrna1;Target=FBgn0010213.1 102 565 +
Chr2	stalkie_big_nohaplotig	CDS	6110061	6110161	.	-	0	Parent=FBgn0010213.1.mrna1;Target=FBgn0010213.1 1 101 +
Chr2	gffcl	locus	6119372	6120197	.	-	.	ID=RLOC_00014362;geneIDs=Dp_FBgn0245479.1.path1;transcripts=Dp_FBgn0245479.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6119372	6120197	.	-	.	ID=Dp_FBgn0245479.1.mrna1;geneID=Dp_FBgn0245479.1.path1;Name=Dp_FBgn0245479.1;Dir=sensecoverage=100.0;identity=98.9;matches=656;mismatches=5;indels=2;unknowns=0;locus=RLOC_00014362
Chr2	stalkie_big_nohaplotig	exon	6119372	6119625	98	-	.	Parent=Dp_FBgn0245479.1.mrna1;Target=Dp_FBgn0245479.1 410 663 +
Chr2	stalkie_big_nohaplotig	exon	6119689	6119789	100	-	.	Parent=Dp_FBgn0245479.1.mrna1;Target=Dp_FBgn0245479.1 309 409 +
Chr2	stalkie_big_nohaplotig	exon	6119892	6120197	98	-	.	Parent=Dp_FBgn0245479.1.mrna1;Target=Dp_FBgn0245479.1 1 308 +
Chr2	stalkie_big_nohaplotig	CDS	6119372	6119625	.	-	2	Parent=Dp_FBgn0245479.1.mrna1;Target=Dp_FBgn0245479.1 410 663 +
Chr2	stalkie_big_nohaplotig	CDS	6119689	6119789	.	-	1	Parent=Dp_FBgn0245479.1.mrna1;Target=Dp_FBgn0245479.1 309 409 +
Chr2	stalkie_big_nohaplotig	CDS	6119892	6120052	.	-	0	Parent=Dp_FBgn0245479.1.mrna1;Target=Dp_FBgn0245479.1 148 308 +
Chr2	gffcl	locus	6124304	6127443	.	+	.	ID=RLOC_00014363;geneIDs=comp156220_c0_seq1.path1;transcripts=comp156220_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6124304	6127443	.	+	.	ID=comp156220_c0_seq1.mrna1;geneID=comp156220_c0_seq1.path1;Name=comp156220_c0_seq1;Dir=sensecoverage=100.0;identity=97.0;matches=2776;mismatches=21;indels=64;unknowns=0;locus=RLOC_00014363
Chr2	stalkie_big_nohaplotig	exon	6124304	6125728	99	+	.	Parent=comp156220_c0_seq1.mrna1;Target=comp156220_c0_seq1 1 1425 +
Chr2	stalkie_big_nohaplotig	exon	6125975	6126109	100	+	.	Parent=comp156220_c0_seq1.mrna1;Target=comp156220_c0_seq1 1426 1560 +
Chr2	stalkie_big_nohaplotig	exon	6126203	6127443	94	+	.	Parent=comp156220_c0_seq1.mrna1;Target=comp156220_c0_seq1 1561 2857 +
Chr2	stalkie_big_nohaplotig	CDS	6124658	6125728	.	+	0	Parent=comp156220_c0_seq1.mrna1;Target=comp156220_c0_seq1 355 1425 +
Chr2	stalkie_big_nohaplotig	CDS	6125975	6126109	.	+	0	Parent=comp156220_c0_seq1.mrna1;Target=comp156220_c0_seq1 1426 1560 +
Chr2	stalkie_big_nohaplotig	CDS	6126203	6126937	.	+	0	Parent=comp156220_c0_seq1.mrna1;Target=comp156220_c0_seq1 1561 2352 +
Chr2	gffcl	locus	6127806	6130093	.	-	.	ID=RLOC_00014364;geneIDs=FBgn0033763.1.path1;transcripts=FBgn0033763.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6127806	6130093	.	-	.	ID=FBgn0033763.1.mrna1;geneID=FBgn0033763.1.path1;Name=FBgn0033763.1;Dir=sensecoverage=100.0;identity=99.2;matches=1696;mismatches=14;indels=0;unknowns=0;locus=RLOC_00014364
Chr2	stalkie_big_nohaplotig	exon	6127806	6127983	99	-	.	Parent=FBgn0033763.1.mrna1;Target=FBgn0033763.1 1533 1710 +
Chr2	stalkie_big_nohaplotig	exon	6128069	6128503	99	-	.	Parent=FBgn0033763.1.mrna1;Target=FBgn0033763.1 1098 1532 +
Chr2	stalkie_big_nohaplotig	exon	6128624	6128936	99	-	.	Parent=FBgn0033763.1.mrna1;Target=FBgn0033763.1 785 1097 +
Chr2	stalkie_big_nohaplotig	exon	6129004	6129225	99	-	.	Parent=FBgn0033763.1.mrna1;Target=FBgn0033763.1 563 784 +
Chr2	stalkie_big_nohaplotig	exon	6129321	6129487	100	-	.	Parent=FBgn0033763.1.mrna1;Target=FBgn0033763.1 396 562 +
Chr2	stalkie_big_nohaplotig	exon	6129548	6129635	98	-	.	Parent=FBgn0033763.1.mrna1;Target=FBgn0033763.1 308 395 +
Chr2	stalkie_big_nohaplotig	exon	6129731	6129890	98	-	.	Parent=FBgn0033763.1.mrna1;Target=FBgn0033763.1 148 307 +
Chr2	stalkie_big_nohaplotig	exon	6129947	6130093	97	-	.	Parent=FBgn0033763.1.mrna1;Target=FBgn0033763.1 1 147 +
Chr2	stalkie_big_nohaplotig	CDS	6127806	6127983	.	-	1	Parent=FBgn0033763.1.mrna1;Target=FBgn0033763.1 1533 1710 +
Chr2	stalkie_big_nohaplotig	CDS	6128069	6128503	.	-	1	Parent=FBgn0033763.1.mrna1;Target=FBgn0033763.1 1098 1532 +
Chr2	stalkie_big_nohaplotig	CDS	6128624	6128936	.	-	2	Parent=FBgn0033763.1.mrna1;Target=FBgn0033763.1 785 1097 +
Chr2	stalkie_big_nohaplotig	CDS	6129004	6129225	.	-	2	Parent=FBgn0033763.1.mrna1;Target=FBgn0033763.1 563 784 +
Chr2	stalkie_big_nohaplotig	CDS	6129321	6129487	.	-	1	Parent=FBgn0033763.1.mrna1;Target=FBgn0033763.1 396 562 +
Chr2	stalkie_big_nohaplotig	CDS	6129548	6129635	.	-	2	Parent=FBgn0033763.1.mrna1;Target=FBgn0033763.1 308 395 +
Chr2	stalkie_big_nohaplotig	CDS	6129731	6129890	.	-	0	Parent=FBgn0033763.1.mrna1;Target=FBgn0033763.1 148 307 +
Chr2	stalkie_big_nohaplotig	CDS	6129947	6130093	.	-	0	Parent=FBgn0033763.1.mrna1;Target=FBgn0033763.1 1 147 +
Chr2	gffcl	locus	6137350	6139592	.	-	.	ID=RLOC_00014365;geneIDs=FBgn0033762.1.path1;transcripts=FBgn0033762.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6137350	6139592	.	-	.	ID=FBgn0033762.1.mrna1;geneID=FBgn0033762.1.path1;Name=FBgn0033762.1;Dir=sensecoverage=100.0;identity=99.5;matches=1532;mismatches=6;indels=1;unknowns=0;Target=FBgn0033762.1 3 44 +;locus=RLOC_00014365
Chr2	stalkie_big_nohaplotig	exon	6137350	6137391	100	-	.	Parent=FBgn0033762.1.mrna1;Target=FBgn0033762.1 1498 1539 +
Chr2	stalkie_big_nohaplotig	exon	6137460	6137573	100	-	.	Parent=FBgn0033762.1.mrna1;Target=FBgn0033762.1 1384 1497 +
Chr2	stalkie_big_nohaplotig	exon	6137627	6137701	100	-	.	Parent=FBgn0033762.1.mrna1;Target=FBgn0033762.1 1309 1383 +
Chr2	stalkie_big_nohaplotig	exon	6137771	6137888	100	-	.	Parent=FBgn0033762.1.mrna1;Target=FBgn0033762.1 1191 1308 +
Chr2	stalkie_big_nohaplotig	exon	6138032	6138242	100	-	.	Parent=FBgn0033762.1.mrna1;Target=FBgn0033762.1 980 1190 +
Chr2	stalkie_big_nohaplotig	exon	6138306	6138573	99	-	.	Parent=FBgn0033762.1.mrna1;Target=FBgn0033762.1 712 979 +
Chr2	stalkie_big_nohaplotig	exon	6138636	6138774	100	-	.	Parent=FBgn0033762.1.mrna1;Target=FBgn0033762.1 573 711 +
Chr2	stalkie_big_nohaplotig	exon	6138885	6139011	100	-	.	Parent=FBgn0033762.1.mrna1;Target=FBgn0033762.1 446 572 +
Chr2	stalkie_big_nohaplotig	exon	6139080	6139347	100	-	.	Parent=FBgn0033762.1.mrna1;Target=FBgn0033762.1 178 445 +
Chr2	stalkie_big_nohaplotig	exon	6139417	6139592	97	-	.	Parent=FBgn0033762.1.mrna1;Target=FBgn0033762.1 1 177 +
Chr2	stalkie_big_nohaplotig	CDS	6139550	6139590	.	-	0	Parent=FBgn0033762.1.mrna1
Chr2	gffcl	locus	6141546	6142427	.	+	.	ID=RLOC_00014366;geneIDs=FBgn0033761.1.path1;transcripts=FBgn0033761.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6141546	6142427	.	+	.	ID=FBgn0033761.1.mrna1;geneID=FBgn0033761.1.path1;Name=FBgn0033761.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=878;mismatches=4;indels=0;unknowns=0;Target=FBgn0033761.1 882 1 .;locus=RLOC_00014366
Chr2	stalkie_big_nohaplotig	exon	6141546	6142427	99	+	.	Parent=FBgn0033761.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	6141546	6142427	.	+	0	Parent=FBgn0033761.1.mrna1
Chr2	gffcl	locus	6155423	6157015	.	+	.	ID=RLOC_00014367;geneIDs=FBgn0033812.1.path2;transcripts=FBgn0033812.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	6155423	6157015	.	+	.	ID=FBgn0033812.1.mrna2;geneID=FBgn0033812.1.path2;Name=FBgn0033812.1;Dir=sensecoverage=100.0;identity=99.8;matches=1323;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014367
Chr2	stalkie_big_nohaplotig	exon	6155423	6156015	99	+	.	Parent=FBgn0033812.1.mrna2;Target=FBgn0033812.1 1 593 +
Chr2	stalkie_big_nohaplotig	exon	6156084	6156310	100	+	.	Parent=FBgn0033812.1.mrna2;Target=FBgn0033812.1 594 820 +
Chr2	stalkie_big_nohaplotig	exon	6156510	6157015	100	+	.	Parent=FBgn0033812.1.mrna2;Target=FBgn0033812.1 821 1326 +
Chr2	stalkie_big_nohaplotig	CDS	6155423	6156015	.	+	0	Parent=FBgn0033812.1.mrna2;Target=FBgn0033812.1 1 593 +
Chr2	stalkie_big_nohaplotig	CDS	6156084	6156310	.	+	1	Parent=FBgn0033812.1.mrna2;Target=FBgn0033812.1 594 820 +
Chr2	stalkie_big_nohaplotig	CDS	6156510	6157015	.	+	2	Parent=FBgn0033812.1.mrna2;Target=FBgn0033812.1 821 1326 +
Chr2	gffcl	locus	6160325	6170495	.	-	.	ID=RLOC_00014368;geneIDs=FBgn0011763.1.path1;transcripts=FBgn0011763.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6160325	6170495	.	-	.	ID=FBgn0011763.1.mrna1;geneID=FBgn0011763.1.path1;Name=FBgn0011763.1;Dir=sensecoverage=100.0;identity=99.8;matches=1309;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014368
Chr2	stalkie_big_nohaplotig	exon	6160325	6160485	99	-	.	Parent=FBgn0011763.1.mrna1;Target=FBgn0011763.1 1151 1311 +
Chr2	stalkie_big_nohaplotig	exon	6160563	6160646	100	-	.	Parent=FBgn0011763.1.mrna1;Target=FBgn0011763.1 1067 1150 +
Chr2	stalkie_big_nohaplotig	exon	6160709	6160791	100	-	.	Parent=FBgn0011763.1.mrna1;Target=FBgn0011763.1 984 1066 +
Chr2	stalkie_big_nohaplotig	exon	6160863	6161098	100	-	.	Parent=FBgn0011763.1.mrna1;Target=FBgn0011763.1 748 983 +
Chr2	stalkie_big_nohaplotig	exon	6163309	6163621	99	-	.	Parent=FBgn0011763.1.mrna1;Target=FBgn0011763.1 435 747 +
Chr2	stalkie_big_nohaplotig	exon	6163678	6163745	100	-	.	Parent=FBgn0011763.1.mrna1;Target=FBgn0011763.1 367 434 +
Chr2	stalkie_big_nohaplotig	exon	6163830	6163948	100	-	.	Parent=FBgn0011763.1.mrna1;Target=FBgn0011763.1 248 366 +
Chr2	stalkie_big_nohaplotig	exon	6164014	6164074	100	-	.	Parent=FBgn0011763.1.mrna1;Target=FBgn0011763.1 187 247 +
Chr2	stalkie_big_nohaplotig	exon	6166731	6166831	100	-	.	Parent=FBgn0011763.1.mrna1;Target=FBgn0011763.1 86 186 +
Chr2	stalkie_big_nohaplotig	exon	6170411	6170495	100	-	.	Parent=FBgn0011763.1.mrna1;Target=FBgn0011763.1 1 85 +
Chr2	stalkie_big_nohaplotig	CDS	6160325	6160485	.	-	2	Parent=FBgn0011763.1.mrna1;Target=FBgn0011763.1 1151 1311 +
Chr2	stalkie_big_nohaplotig	CDS	6160563	6160646	.	-	2	Parent=FBgn0011763.1.mrna1;Target=FBgn0011763.1 1067 1150 +
Chr2	stalkie_big_nohaplotig	CDS	6160709	6160791	.	-	1	Parent=FBgn0011763.1.mrna1;Target=FBgn0011763.1 984 1066 +
Chr2	stalkie_big_nohaplotig	CDS	6160863	6161098	.	-	0	Parent=FBgn0011763.1.mrna1;Target=FBgn0011763.1 748 983 +
Chr2	stalkie_big_nohaplotig	CDS	6163309	6163621	.	-	1	Parent=FBgn0011763.1.mrna1;Target=FBgn0011763.1 435 747 +
Chr2	stalkie_big_nohaplotig	CDS	6163678	6163745	.	-	0	Parent=FBgn0011763.1.mrna1;Target=FBgn0011763.1 367 434 +
Chr2	stalkie_big_nohaplotig	CDS	6163830	6163948	.	-	2	Parent=FBgn0011763.1.mrna1;Target=FBgn0011763.1 248 366 +
Chr2	stalkie_big_nohaplotig	CDS	6164014	6164074	.	-	0	Parent=FBgn0011763.1.mrna1;Target=FBgn0011763.1 187 247 +
Chr2	stalkie_big_nohaplotig	CDS	6166731	6166831	.	-	2	Parent=FBgn0011763.1.mrna1;Target=FBgn0011763.1 86 186 +
Chr2	stalkie_big_nohaplotig	CDS	6170411	6170495	.	-	0	Parent=FBgn0011763.1.mrna1;Target=FBgn0011763.1 1 85 +
Chr2	gffcl	locus	6173499	6177989	.	-	.	ID=RLOC_00014369;geneIDs=FBgn0051989.1.path1;transcripts=FBgn0051989.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6173499	6177989	.	-	.	ID=FBgn0051989.1.mrna1;geneID=FBgn0051989.1.path1;Name=FBgn0051989.1;Dir=sensecoverage=100.0;identity=99.5;matches=3648;mismatches=17;indels=1;unknowns=0;locus=RLOC_00014369
Chr2	stalkie_big_nohaplotig	exon	6173499	6173746	99	-	.	Parent=FBgn0051989.1.mrna1;Target=FBgn0051989.1 3418 3666 +
Chr2	stalkie_big_nohaplotig	exon	6173805	6174058	98	-	.	Parent=FBgn0051989.1.mrna1;Target=FBgn0051989.1 3164 3417 +
Chr2	stalkie_big_nohaplotig	exon	6174122	6174281	100	-	.	Parent=FBgn0051989.1.mrna1;Target=FBgn0051989.1 3004 3163 +
Chr2	stalkie_big_nohaplotig	exon	6174609	6175508	99	-	.	Parent=FBgn0051989.1.mrna1;Target=FBgn0051989.1 2104 3003 +
Chr2	stalkie_big_nohaplotig	exon	6175565	6175712	100	-	.	Parent=FBgn0051989.1.mrna1;Target=FBgn0051989.1 1956 2103 +
Chr2	stalkie_big_nohaplotig	exon	6175778	6175938	99	-	.	Parent=FBgn0051989.1.mrna1;Target=FBgn0051989.1 1795 1955 +
Chr2	stalkie_big_nohaplotig	exon	6176003	6176179	100	-	.	Parent=FBgn0051989.1.mrna1;Target=FBgn0051989.1 1618 1794 +
Chr2	stalkie_big_nohaplotig	exon	6176247	6176885	99	-	.	Parent=FBgn0051989.1.mrna1;Target=FBgn0051989.1 979 1617 +
Chr2	stalkie_big_nohaplotig	exon	6176945	6177219	99	-	.	Parent=FBgn0051989.1.mrna1;Target=FBgn0051989.1 704 978 +
Chr2	stalkie_big_nohaplotig	exon	6177287	6177989	99	-	.	Parent=FBgn0051989.1.mrna1;Target=FBgn0051989.1 1 703 +
Chr2	stalkie_big_nohaplotig	CDS	6173499	6173746	.	-	0	Parent=FBgn0051989.1.mrna1;Target=FBgn0051989.1 3418 3666 +
Chr2	stalkie_big_nohaplotig	CDS	6173805	6174058	.	-	2	Parent=FBgn0051989.1.mrna1;Target=FBgn0051989.1 3164 3417 +
Chr2	stalkie_big_nohaplotig	CDS	6174122	6174281	.	-	0	Parent=FBgn0051989.1.mrna1;Target=FBgn0051989.1 3004 3163 +
Chr2	stalkie_big_nohaplotig	CDS	6174609	6175508	.	-	0	Parent=FBgn0051989.1.mrna1;Target=FBgn0051989.1 2104 3003 +
Chr2	stalkie_big_nohaplotig	CDS	6175565	6175712	.	-	1	Parent=FBgn0051989.1.mrna1;Target=FBgn0051989.1 1956 2103 +
Chr2	stalkie_big_nohaplotig	CDS	6175778	6175938	.	-	0	Parent=FBgn0051989.1.mrna1;Target=FBgn0051989.1 1795 1955 +
Chr2	stalkie_big_nohaplotig	CDS	6176003	6176179	.	-	0	Parent=FBgn0051989.1.mrna1;Target=FBgn0051989.1 1618 1794 +
Chr2	stalkie_big_nohaplotig	CDS	6176247	6176885	.	-	0	Parent=FBgn0051989.1.mrna1;Target=FBgn0051989.1 979 1617 +
Chr2	stalkie_big_nohaplotig	CDS	6176945	6177219	.	-	2	Parent=FBgn0051989.1.mrna1;Target=FBgn0051989.1 704 978 +
Chr2	stalkie_big_nohaplotig	CDS	6177287	6177989	.	-	0	Parent=FBgn0051989.1.mrna1;Target=FBgn0051989.1 1 703 +
Chr2	gffcl	locus	6179366	6180619	.	+	.	ID=RLOC_00014370;geneIDs=FBgn0043010.1.path1;transcripts=FBgn0043010.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6179366	6180619	.	+	.	ID=FBgn0043010.1.mrna1;geneID=FBgn0043010.1.path1;Name=FBgn0043010.1;Dir=sensecoverage=100.0;identity=100.0;matches=783;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014370
Chr2	stalkie_big_nohaplotig	exon	6179366	6179691	100	+	.	Parent=FBgn0043010.1.mrna1;Target=FBgn0043010.1 1 326 +
Chr2	stalkie_big_nohaplotig	exon	6179752	6180025	100	+	.	Parent=FBgn0043010.1.mrna1;Target=FBgn0043010.1 327 600 +
Chr2	stalkie_big_nohaplotig	exon	6180081	6180171	100	+	.	Parent=FBgn0043010.1.mrna1;Target=FBgn0043010.1 601 691 +
Chr2	stalkie_big_nohaplotig	exon	6180528	6180619	100	+	.	Parent=FBgn0043010.1.mrna1;Target=FBgn0043010.1 692 783 +
Chr2	stalkie_big_nohaplotig	CDS	6179366	6179691	.	+	0	Parent=FBgn0043010.1.mrna1;Target=FBgn0043010.1 1 326 +
Chr2	stalkie_big_nohaplotig	CDS	6179752	6180025	.	+	1	Parent=FBgn0043010.1.mrna1;Target=FBgn0043010.1 327 600 +
Chr2	stalkie_big_nohaplotig	CDS	6180081	6180171	.	+	0	Parent=FBgn0043010.1.mrna1;Target=FBgn0043010.1 601 691 +
Chr2	stalkie_big_nohaplotig	CDS	6180528	6180619	.	+	2	Parent=FBgn0043010.1.mrna1;Target=FBgn0043010.1 692 783 +
Chr2	gffcl	locus	6181365	6182080	.	-	.	ID=RLOC_00014371;geneIDs=comp112340_c0_seq1.path1;transcripts=comp112340_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6181365	6182080	.	-	.	ID=comp112340_c0_seq1.mrna1;geneID=comp112340_c0_seq1.path1;Name=comp112340_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=715;mismatches=1;indels=0;unknowns=0;Target=comp112340_c0_seq1 716 1 .;CDS_Target=comp112340_c0_seq1 282 109 .;locus=RLOC_00014371
Chr2	stalkie_big_nohaplotig	exon	6181365	6182080	99	-	.	Parent=comp112340_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	6181799	6181972	.	-	0	Parent=comp112340_c0_seq1.mrna1
Chr2	gffcl	locus	6183844	6184396	.	+	.	ID=RLOC_00014372;geneIDs=FBgn0033810.1.path1;transcripts=FBgn0033810.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6183844	6184396	.	+	.	ID=FBgn0033810.1.mrna1;geneID=FBgn0033810.1.path1;Name=FBgn0033810.1;Dir=sensecoverage=100.0;identity=99.6;matches=496;mismatches=1;indels=1;unknowns=0;Target=FBgn0033810.1 3 134 +;locus=RLOC_00014372
Chr2	stalkie_big_nohaplotig	exon	6183844	6184104	99	+	.	Parent=FBgn0033810.1.mrna1;Target=FBgn0033810.1 1 262 +
Chr2	stalkie_big_nohaplotig	exon	6184161	6184396	100	+	.	Parent=FBgn0033810.1.mrna1;Target=FBgn0033810.1 263 498 +
Chr2	stalkie_big_nohaplotig	CDS	6183846	6183976	.	+	0	Parent=FBgn0033810.1.mrna1
Chr2	gffcl	locus	6187219	6204580	.	-	.	ID=RLOC_00014373;geneIDs=FBgn0033052.1.path1;transcripts=FBgn0033052.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6187219	6204580	.	-	.	ID=FBgn0033052.1.mrna1;geneID=FBgn0033052.1.path1;Name=FBgn0033052.1;Dir=sensecoverage=100.0;identity=99.6;matches=3228;mismatches=11;indels=1;unknowns=0;locus=RLOC_00014373
Chr2	stalkie_big_nohaplotig	exon	6187219	6187294	98	-	.	Parent=FBgn0033052.1.mrna1;Target=FBgn0033052.1 3164 3240 +
Chr2	stalkie_big_nohaplotig	exon	6187484	6187652	100	-	.	Parent=FBgn0033052.1.mrna1;Target=FBgn0033052.1 2995 3163 +
Chr2	stalkie_big_nohaplotig	exon	6187725	6188545	99	-	.	Parent=FBgn0033052.1.mrna1;Target=FBgn0033052.1 2174 2994 +
Chr2	stalkie_big_nohaplotig	exon	6188607	6190071	99	-	.	Parent=FBgn0033052.1.mrna1;Target=FBgn0033052.1 709 2173 +
Chr2	stalkie_big_nohaplotig	exon	6193112	6193286	99	-	.	Parent=FBgn0033052.1.mrna1;Target=FBgn0033052.1 534 708 +
Chr2	stalkie_big_nohaplotig	exon	6193458	6193778	100	-	.	Parent=FBgn0033052.1.mrna1;Target=FBgn0033052.1 213 533 +
Chr2	stalkie_big_nohaplotig	exon	6204369	6204580	99	-	.	Parent=FBgn0033052.1.mrna1;Target=FBgn0033052.1 1 212 +
Chr2	stalkie_big_nohaplotig	CDS	6187219	6187294	.	-	2	Parent=FBgn0033052.1.mrna1;Target=FBgn0033052.1 3164 3240 +
Chr2	stalkie_big_nohaplotig	CDS	6187484	6187652	.	-	0	Parent=FBgn0033052.1.mrna1;Target=FBgn0033052.1 2995 3163 +
Chr2	stalkie_big_nohaplotig	CDS	6187725	6188545	.	-	2	Parent=FBgn0033052.1.mrna1;Target=FBgn0033052.1 2174 2994 +
Chr2	stalkie_big_nohaplotig	CDS	6188607	6190071	.	-	0	Parent=FBgn0033052.1.mrna1;Target=FBgn0033052.1 709 2173 +
Chr2	stalkie_big_nohaplotig	CDS	6193112	6193286	.	-	1	Parent=FBgn0033052.1.mrna1;Target=FBgn0033052.1 534 708 +
Chr2	stalkie_big_nohaplotig	CDS	6193458	6193778	.	-	1	Parent=FBgn0033052.1.mrna1;Target=FBgn0033052.1 213 533 +
Chr2	stalkie_big_nohaplotig	CDS	6204369	6204580	.	-	0	Parent=FBgn0033052.1.mrna1;Target=FBgn0033052.1 1 212 +
Chr2	gffcl	locus	6207249	6210714	.	-	.	ID=RLOC_00014374;geneIDs=FBgn0033054.2.path1;transcripts=FBgn0033054.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6207249	6210714	.	-	.	ID=FBgn0033054.2.mrna1;geneID=FBgn0033054.2.path1;Name=FBgn0033054.2;Dir=sensecoverage=100.0;identity=99.8;matches=964;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014374
Chr2	stalkie_big_nohaplotig	exon	6207249	6207518	99	-	.	Parent=FBgn0033054.2.mrna1;Target=FBgn0033054.2 697 966 +
Chr2	stalkie_big_nohaplotig	exon	6207616	6207716	100	-	.	Parent=FBgn0033054.2.mrna1;Target=FBgn0033054.2 596 696 +
Chr2	stalkie_big_nohaplotig	exon	6207779	6207971	99	-	.	Parent=FBgn0033054.2.mrna1;Target=FBgn0033054.2 403 595 +
Chr2	stalkie_big_nohaplotig	exon	6210313	6210714	100	-	.	Parent=FBgn0033054.2.mrna1;Target=FBgn0033054.2 1 402 +
Chr2	stalkie_big_nohaplotig	CDS	6207249	6207518	.	-	0	Parent=FBgn0033054.2.mrna1;Target=FBgn0033054.2 697 966 +
Chr2	stalkie_big_nohaplotig	CDS	6207616	6207716	.	-	2	Parent=FBgn0033054.2.mrna1;Target=FBgn0033054.2 596 696 +
Chr2	stalkie_big_nohaplotig	CDS	6207779	6207971	.	-	0	Parent=FBgn0033054.2.mrna1;Target=FBgn0033054.2 403 595 +
Chr2	stalkie_big_nohaplotig	CDS	6210313	6210714	.	-	0	Parent=FBgn0033054.2.mrna1;Target=FBgn0033054.2 1 402 +
Chr2	gffcl	locus	6208153	6209785	.	-	.	ID=RLOC_00014375;geneIDs=comp153700_c0_seq1.path1;transcripts=comp153700_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6208153	6209785	.	-	.	ID=comp153700_c0_seq1.mrna1;geneID=comp153700_c0_seq1.path1;Name=comp153700_c0_seq1;Dir=antisensecoverage=100.0;identity=89.9;matches=674;mismatches=29;indels=47;unknowns=0;Target=comp153700_c0_seq1 629 745 .;locus=RLOC_00014375
Chr2	stalkie_big_nohaplotig	exon	6208153	6208718	89	-	.	Parent=comp153700_c0_seq1.mrna1;Target=comp153700_c0_seq1 1 609 -
Chr2	stalkie_big_nohaplotig	exon	6209646	6209785	92	-	.	Parent=comp153700_c0_seq1.mrna1;Target=comp153700_c0_seq1 610 747 -
Chr2	stalkie_big_nohaplotig	CDS	6209664	6209783	.	-	0	Parent=comp153700_c0_seq1.mrna1
Chr2	gffcl	locus	6213538	6214508	.	-	.	ID=RLOC_00014376;geneIDs=FBgn0033054.1.path1;transcripts=FBgn0033054.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6213538	6214508	.	-	.	ID=FBgn0033054.1.mrna1;geneID=FBgn0033054.1.path1;Name=FBgn0033054.1;Dir=sensecoverage=100.0;identity=99.7;matches=769;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014376
Chr2	stalkie_big_nohaplotig	exon	6213538	6213972	99	-	.	Parent=FBgn0033054.1.mrna1;Target=FBgn0033054.1 337 771 +
Chr2	stalkie_big_nohaplotig	exon	6214040	6214140	100	-	.	Parent=FBgn0033054.1.mrna1;Target=FBgn0033054.1 236 336 +
Chr2	stalkie_big_nohaplotig	exon	6214197	6214389	100	-	.	Parent=FBgn0033054.1.mrna1;Target=FBgn0033054.1 43 235 +
Chr2	stalkie_big_nohaplotig	exon	6214467	6214508	100	-	.	Parent=FBgn0033054.1.mrna1;Target=FBgn0033054.1 1 42 +
Chr2	stalkie_big_nohaplotig	CDS	6213538	6213972	.	-	0	Parent=FBgn0033054.1.mrna1;Target=FBgn0033054.1 337 771 +
Chr2	stalkie_big_nohaplotig	CDS	6214040	6214140	.	-	2	Parent=FBgn0033054.1.mrna1;Target=FBgn0033054.1 236 336 +
Chr2	stalkie_big_nohaplotig	CDS	6214197	6214389	.	-	0	Parent=FBgn0033054.1.mrna1;Target=FBgn0033054.1 43 235 +
Chr2	stalkie_big_nohaplotig	CDS	6214467	6214508	.	-	0	Parent=FBgn0033054.1.mrna1;Target=FBgn0033054.1 1 42 +
Chr2	gffcl	locus	6215374	6216287	.	+	.	ID=RLOC_00014377;geneIDs=comp153534_c0_seq1.path1;transcripts=comp153534_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6215374	6216287	.	+	.	ID=comp153534_c0_seq1.mrna1;geneID=comp153534_c0_seq1.path1;Name=comp153534_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=898;mismatches=16;indels=8;unknowns=0;Target=comp153534_c0_seq1 922 1 .;CDS_Target=comp153534_c0_seq1 411 268 .;locus=RLOC_00014377
Chr2	stalkie_big_nohaplotig	exon	6215374	6216287	97	+	.	Parent=comp153534_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	6215637	6215780	.	+	0	Parent=comp153534_c0_seq1.mrna1
Chr2	gffcl	locus	6230980	6232396	.	+	.	ID=RLOC_00014378;geneIDs=FBgn0033413.1.path1,comp150319_c0_seq1.path1;transcripts=FBgn0033413.1.mrna1,comp150319_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6230980	6232396	.	+	.	ID=FBgn0033413.1.mrna1;geneID=FBgn0033413.1.path1;Name=FBgn0033413.1;Dir=sensecoverage=100.0;identity=99.7;matches=739;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014378
Chr2	stalkie_big_nohaplotig	exon	6230980	6231119	99	+	.	Parent=FBgn0033413.1.mrna1;Target=FBgn0033413.1 1 140 +
Chr2	stalkie_big_nohaplotig	exon	6231182	6231395	99	+	.	Parent=FBgn0033413.1.mrna1;Target=FBgn0033413.1 141 354 +
Chr2	stalkie_big_nohaplotig	exon	6232010	6232396	100	+	.	Parent=FBgn0033413.1.mrna1;Target=FBgn0033413.1 355 741 +
Chr2	stalkie_big_nohaplotig	CDS	6230980	6231119	.	+	0	Parent=FBgn0033413.1.mrna1;Target=FBgn0033413.1 1 140 +
Chr2	stalkie_big_nohaplotig	CDS	6231182	6231395	.	+	1	Parent=FBgn0033413.1.mrna1;Target=FBgn0033413.1 141 354 +
Chr2	stalkie_big_nohaplotig	CDS	6232010	6232396	.	+	0	Parent=FBgn0033413.1.mrna1;Target=FBgn0033413.1 355 741 +
Chr2	stalkie_big_nohaplotig	mRNA	6231372	6232031	.	+	.	ID=comp150319_c0_seq1.mrna1;geneID=comp150319_c0_seq1.path1;Name=comp150319_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.1;matches=587;mismatches=22;indels=15;unknowns=0;Target=comp150319_c0_seq1 335 192 .;locus=RLOC_00014378
Chr2	stalkie_big_nohaplotig	exon	6231372	6231779	92	+	.	Parent=comp150319_c0_seq1.mrna1;Target=comp150319_c0_seq1 407 1 .
Chr2	stalkie_big_nohaplotig	exon	6231824	6232031	96	+	.	Parent=comp150319_c0_seq1.mrna1;Target=comp150319_c0_seq1 624 415 .
Chr2	stalkie_big_nohaplotig	CDS	6231564	6231707	.	+	0	Parent=comp150319_c0_seq1.mrna1
Chr2	gffcl	locus	6234498	6235475	.	+	.	ID=RLOC_00014379;geneIDs=comp134345_c0_seq1.path1;transcripts=comp134345_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6234498	6235475	.	+	.	ID=comp134345_c0_seq1.mrna1;geneID=comp134345_c0_seq1.path1;Name=comp134345_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=686;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014379
Chr2	stalkie_big_nohaplotig	exon	6234498	6235060	100	+	.	Parent=comp134345_c0_seq1.mrna1;Target=comp134345_c0_seq1 1 563 +
Chr2	stalkie_big_nohaplotig	exon	6235353	6235475	100	+	.	Parent=comp134345_c0_seq1.mrna1;Target=comp134345_c0_seq1 564 686 +
Chr2	stalkie_big_nohaplotig	CDS	6235034	6235060	.	+	0	Parent=comp134345_c0_seq1.mrna1;Target=comp134345_c0_seq1 537 563 +
Chr2	stalkie_big_nohaplotig	CDS	6235353	6235475	.	+	0	Parent=comp134345_c0_seq1.mrna1;Target=comp134345_c0_seq1 564 686 +
Chr2	gffcl	locus	6239381	6244097	.	+	.	ID=RLOC_00014380;geneIDs=FBgn0011604.1.path1;transcripts=FBgn0011604.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6239381	6244097	.	+	.	ID=FBgn0011604.1.mrna1;geneID=FBgn0011604.1.path1;Name=FBgn0011604.1;Dir=sensecoverage=100.0;identity=100.0;matches=3066;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014380
Chr2	stalkie_big_nohaplotig	exon	6239381	6239437	100	+	.	Parent=FBgn0011604.1.mrna1;Target=FBgn0011604.1 1 57 +
Chr2	stalkie_big_nohaplotig	exon	6240130	6240353	100	+	.	Parent=FBgn0011604.1.mrna1;Target=FBgn0011604.1 58 281 +
Chr2	stalkie_big_nohaplotig	exon	6240422	6240676	100	+	.	Parent=FBgn0011604.1.mrna1;Target=FBgn0011604.1 282 536 +
Chr2	stalkie_big_nohaplotig	exon	6240761	6241847	100	+	.	Parent=FBgn0011604.1.mrna1;Target=FBgn0011604.1 537 1623 +
Chr2	stalkie_big_nohaplotig	exon	6241913	6242941	100	+	.	Parent=FBgn0011604.1.mrna1;Target=FBgn0011604.1 1624 2652 +
Chr2	stalkie_big_nohaplotig	exon	6243627	6243787	100	+	.	Parent=FBgn0011604.1.mrna1;Target=FBgn0011604.1 2653 2813 +
Chr2	stalkie_big_nohaplotig	exon	6243845	6244097	100	+	.	Parent=FBgn0011604.1.mrna1;Target=FBgn0011604.1 2814 3066 +
Chr2	stalkie_big_nohaplotig	CDS	6239381	6239437	.	+	0	Parent=FBgn0011604.1.mrna1;Target=FBgn0011604.1 1 57 +
Chr2	stalkie_big_nohaplotig	CDS	6240130	6240353	.	+	0	Parent=FBgn0011604.1.mrna1;Target=FBgn0011604.1 58 281 +
Chr2	stalkie_big_nohaplotig	CDS	6240422	6240676	.	+	1	Parent=FBgn0011604.1.mrna1;Target=FBgn0011604.1 282 536 +
Chr2	stalkie_big_nohaplotig	CDS	6240761	6241847	.	+	1	Parent=FBgn0011604.1.mrna1;Target=FBgn0011604.1 537 1623 +
Chr2	stalkie_big_nohaplotig	CDS	6241913	6242941	.	+	0	Parent=FBgn0011604.1.mrna1;Target=FBgn0011604.1 1624 2652 +
Chr2	stalkie_big_nohaplotig	CDS	6243627	6243787	.	+	0	Parent=FBgn0011604.1.mrna1;Target=FBgn0011604.1 2653 2813 +
Chr2	stalkie_big_nohaplotig	CDS	6243845	6244097	.	+	1	Parent=FBgn0011604.1.mrna1;Target=FBgn0011604.1 2814 3066 +
Chr2	gffcl	locus	6246290	6248317	.	-	.	ID=RLOC_00014381;geneIDs=FBgn0052396.1.path1;transcripts=FBgn0052396.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6246290	6248317	.	-	.	ID=FBgn0052396.1.mrna1;geneID=FBgn0052396.1.path1;Name=FBgn0052396.1;Dir=sensecoverage=100.0;identity=100.0;matches=1383;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014381
Chr2	stalkie_big_nohaplotig	exon	6246290	6247561	100	-	.	Parent=FBgn0052396.1.mrna1;Target=FBgn0052396.1 112 1383 +
Chr2	stalkie_big_nohaplotig	exon	6248207	6248317	100	-	.	Parent=FBgn0052396.1.mrna1;Target=FBgn0052396.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	6246290	6247561	.	-	0	Parent=FBgn0052396.1.mrna1;Target=FBgn0052396.1 112 1383 +
Chr2	stalkie_big_nohaplotig	CDS	6248207	6248317	.	-	0	Parent=FBgn0052396.1.mrna1;Target=FBgn0052396.1 1 111 +
Chr2	gffcl	locus	6250336	6259603	.	-	.	ID=RLOC_00014382;geneIDs=FBgn0033760.1.path1;transcripts=FBgn0033760.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6250336	6259603	.	-	.	ID=FBgn0033760.1.mrna1;geneID=FBgn0033760.1.path1;Name=FBgn0033760.1;Dir=sensecoverage=100.0;identity=99.4;matches=1381;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014382
Chr2	stalkie_big_nohaplotig	exon	6250336	6250505	100	-	.	Parent=FBgn0033760.1.mrna1;Target=FBgn0033760.1 1220 1389 +
Chr2	stalkie_big_nohaplotig	exon	6250569	6250813	98	-	.	Parent=FBgn0033760.1.mrna1;Target=FBgn0033760.1 975 1219 +
Chr2	stalkie_big_nohaplotig	exon	6250877	6251413	100	-	.	Parent=FBgn0033760.1.mrna1;Target=FBgn0033760.1 438 974 +
Chr2	stalkie_big_nohaplotig	exon	6251735	6251856	100	-	.	Parent=FBgn0033760.1.mrna1;Target=FBgn0033760.1 316 437 +
Chr2	stalkie_big_nohaplotig	exon	6254588	6254816	98	-	.	Parent=FBgn0033760.1.mrna1;Target=FBgn0033760.1 87 315 +
Chr2	stalkie_big_nohaplotig	exon	6254885	6254952	100	-	.	Parent=FBgn0033760.1.mrna1;Target=FBgn0033760.1 19 86 +
Chr2	stalkie_big_nohaplotig	exon	6259586	6259603	94	-	.	Parent=FBgn0033760.1.mrna1;Target=FBgn0033760.1 1 18 +
Chr2	stalkie_big_nohaplotig	CDS	6250336	6250505	.	-	2	Parent=FBgn0033760.1.mrna1;Target=FBgn0033760.1 1220 1389 +
Chr2	stalkie_big_nohaplotig	CDS	6250569	6250813	.	-	1	Parent=FBgn0033760.1.mrna1;Target=FBgn0033760.1 975 1219 +
Chr2	stalkie_big_nohaplotig	CDS	6250877	6251413	.	-	1	Parent=FBgn0033760.1.mrna1;Target=FBgn0033760.1 438 974 +
Chr2	stalkie_big_nohaplotig	CDS	6251735	6251856	.	-	0	Parent=FBgn0033760.1.mrna1;Target=FBgn0033760.1 316 437 +
Chr2	stalkie_big_nohaplotig	CDS	6254588	6254816	.	-	1	Parent=FBgn0033760.1.mrna1;Target=FBgn0033760.1 87 315 +
Chr2	stalkie_big_nohaplotig	CDS	6254885	6254952	.	-	0	Parent=FBgn0033760.1.mrna1;Target=FBgn0033760.1 19 86 +
Chr2	stalkie_big_nohaplotig	CDS	6259586	6259603	.	-	0	Parent=FBgn0033760.1.mrna1;Target=FBgn0033760.1 1 18 +
Chr2	gffcl	locus	6310907	6400262	.	+	.	ID=RLOC_00014384;geneIDs=comp153748_c0_seq1.path1;transcripts=comp153748_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6310907	6400262	.	+	.	ID=comp153748_c0_seq1.mrna1;geneID=comp153748_c0_seq1.path1;Name=comp153748_c0_seq1;Dir=sensecoverage=74.8;identity=99.1;matches=985;mismatches=9;indels=0;unknowns=0;Target=comp153748_c0_seq1 392 976 +;locus=RLOC_00014384
Chr2	stalkie_big_nohaplotig	exon	6310907	6310915	100	+	.	Parent=comp153748_c0_seq1.mrna1;Target=comp153748_c0_seq1 280 288 +
Chr2	stalkie_big_nohaplotig	exon	6313363	6313365	100	+	.	Parent=comp153748_c0_seq1.mrna1;Target=comp153748_c0_seq1 289 291 +
Chr2	stalkie_big_nohaplotig	exon	6333464	6333477	92	+	.	Parent=comp153748_c0_seq1.mrna1;Target=comp153748_c0_seq1 292 305 +
Chr2	stalkie_big_nohaplotig	exon	6336818	6336820	100	+	.	Parent=comp153748_c0_seq1.mrna1;Target=comp153748_c0_seq1 306 308 +
Chr2	stalkie_big_nohaplotig	exon	6337748	6337749	100	+	.	Parent=comp153748_c0_seq1.mrna1;Target=comp153748_c0_seq1 309 310 +
Chr2	stalkie_big_nohaplotig	exon	6340810	6340813	100	+	.	Parent=comp153748_c0_seq1.mrna1;Target=comp153748_c0_seq1 311 314 +
Chr2	stalkie_big_nohaplotig	exon	6348251	6348252	50	+	.	Parent=comp153748_c0_seq1.mrna1;Target=comp153748_c0_seq1 315 316 +
Chr2	stalkie_big_nohaplotig	exon	6355858	6355864	85	+	.	Parent=comp153748_c0_seq1.mrna1;Target=comp153748_c0_seq1 317 323 +
Chr2	stalkie_big_nohaplotig	exon	6387719	6387724	100	+	.	Parent=comp153748_c0_seq1.mrna1;Target=comp153748_c0_seq1 324 329 +
Chr2	stalkie_big_nohaplotig	exon	6399319	6400262	99	+	.	Parent=comp153748_c0_seq1.mrna1;Target=comp153748_c0_seq1 330 1273 +
Chr2	stalkie_big_nohaplotig	CDS	6399381	6399965	.	+	0	Parent=comp153748_c0_seq1.mrna1
Chr2	gffcl	locus	6353020	6353921	.	+	.	ID=RLOC_00014385;geneIDs=comp142669_c0_seq1.path1;transcripts=comp142669_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6353020	6353921	.	+	.	ID=comp142669_c0_seq1.mrna1;geneID=comp142669_c0_seq1.path1;Name=comp142669_c0_seq1;Dir=indeterminatecoverage=98.7;identity=99.1;matches=898;mismatches=3;indels=5;unknowns=0;Target=comp142669_c0_seq1 905 1 .;CDS_Target=comp142669_c0_seq1 624 490 .;locus=RLOC_00014385
Chr2	stalkie_big_nohaplotig	exon	6353020	6353921	99	+	.	Parent=comp142669_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	6353505	6353639	.	+	0	Parent=comp142669_c0_seq1.mrna1
Chr2	gffcl	locus	6369165	6369852	.	+	.	ID=RLOC_00014387;geneIDs=FBgn0033170.1.path1;transcripts=FBgn0033170.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6369165	6369852	.	+	.	ID=FBgn0033170.1.mrna1;geneID=FBgn0033170.1.path1;Name=FBgn0033170.1;Dir=sensecoverage=100.0;identity=99.8;matches=626;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014387
Chr2	stalkie_big_nohaplotig	exon	6369165	6369514	100	+	.	Parent=FBgn0033170.1.mrna1;Target=FBgn0033170.1 1 350 +
Chr2	stalkie_big_nohaplotig	exon	6369576	6369852	99	+	.	Parent=FBgn0033170.1.mrna1;Target=FBgn0033170.1 351 627 +
Chr2	stalkie_big_nohaplotig	CDS	6369165	6369514	.	+	0	Parent=FBgn0033170.1.mrna1;Target=FBgn0033170.1 1 350 +
Chr2	stalkie_big_nohaplotig	CDS	6369576	6369852	.	+	1	Parent=FBgn0033170.1.mrna1;Target=FBgn0033170.1 351 627 +
Chr2	gffcl	locus	6369984	6372032	.	-	.	ID=RLOC_00014388;geneIDs=FBgn0033169.1.path1;transcripts=FBgn0033169.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6369984	6372032	.	-	.	ID=FBgn0033169.1.mrna1;geneID=FBgn0033169.1.path1;Name=FBgn0033169.1;Dir=sensecoverage=100.0;identity=99.9;matches=1994;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014388
Chr2	stalkie_big_nohaplotig	exon	6369984	6371716	99	-	.	Parent=FBgn0033169.1.mrna1;Target=FBgn0033169.1 263 1995 +
Chr2	stalkie_big_nohaplotig	exon	6371771	6372032	100	-	.	Parent=FBgn0033169.1.mrna1;Target=FBgn0033169.1 1 262 +
Chr2	stalkie_big_nohaplotig	CDS	6369984	6371716	.	-	2	Parent=FBgn0033169.1.mrna1;Target=FBgn0033169.1 263 1995 +
Chr2	stalkie_big_nohaplotig	CDS	6371771	6372032	.	-	0	Parent=FBgn0033169.1.mrna1;Target=FBgn0033169.1 1 262 +
Chr2	gffcl	locus	6373029	6373752	.	+	.	ID=RLOC_00014389;geneIDs=FBgn0040513.1.path1;transcripts=FBgn0040513.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6373029	6373752	.	+	.	ID=FBgn0040513.1.mrna1;geneID=FBgn0040513.1.path1;Name=FBgn0040513.1;Dir=sensecoverage=100.0;identity=99.8;matches=632;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014389
Chr2	stalkie_big_nohaplotig	exon	6373029	6373148	100	+	.	Parent=FBgn0040513.1.mrna1;Target=FBgn0040513.1 1 120 +
Chr2	stalkie_big_nohaplotig	exon	6373240	6373752	99	+	.	Parent=FBgn0040513.1.mrna1;Target=FBgn0040513.1 121 633 +
Chr2	stalkie_big_nohaplotig	CDS	6373029	6373148	.	+	0	Parent=FBgn0040513.1.mrna1;Target=FBgn0040513.1 1 120 +
Chr2	stalkie_big_nohaplotig	CDS	6373240	6373752	.	+	0	Parent=FBgn0040513.1.mrna1;Target=FBgn0040513.1 121 633 +
Chr2	gffcl	locus	6374350	6378568	.	-	.	ID=RLOC_00014390;geneIDs=FBgn0050502.1.path1;transcripts=FBgn0050502.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6374350	6378568	.	-	.	ID=FBgn0050502.1.mrna1;geneID=FBgn0050502.1.path1;Name=FBgn0050502.1;Dir=sensecoverage=100.0;identity=99.3;matches=739;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014390
Chr2	stalkie_big_nohaplotig	exon	6374350	6374835	99	-	.	Parent=FBgn0050502.1.mrna1;Target=FBgn0050502.1 259 744 +
Chr2	stalkie_big_nohaplotig	exon	6374911	6375144	99	-	.	Parent=FBgn0050502.1.mrna1;Target=FBgn0050502.1 25 258 +
Chr2	stalkie_big_nohaplotig	exon	6378545	6378568	100	-	.	Parent=FBgn0050502.1.mrna1;Target=FBgn0050502.1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	6374350	6374835	.	-	0	Parent=FBgn0050502.1.mrna1;Target=FBgn0050502.1 259 744 +
Chr2	stalkie_big_nohaplotig	CDS	6374911	6375144	.	-	0	Parent=FBgn0050502.1.mrna1;Target=FBgn0050502.1 25 258 +
Chr2	stalkie_big_nohaplotig	CDS	6378545	6378568	.	-	0	Parent=FBgn0050502.1.mrna1;Target=FBgn0050502.1 1 24 +
Chr2	gffcl	locus	6376277	6378234	.	+	.	ID=RLOC_00014391;geneIDs=FBgn0033174.1.path1;transcripts=FBgn0033174.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6376277	6378234	.	+	.	ID=FBgn0033174.1.mrna1;geneID=FBgn0033174.1.path1;Name=FBgn0033174.1;Dir=sensecoverage=100.0;identity=99.8;matches=1407;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014391
Chr2	stalkie_big_nohaplotig	exon	6376277	6376364	98	+	.	Parent=FBgn0033174.1.mrna1;Target=FBgn0033174.1 1 88 +
Chr2	stalkie_big_nohaplotig	exon	6376447	6376870	100	+	.	Parent=FBgn0033174.1.mrna1;Target=FBgn0033174.1 89 512 +
Chr2	stalkie_big_nohaplotig	exon	6376938	6377518	99	+	.	Parent=FBgn0033174.1.mrna1;Target=FBgn0033174.1 513 1093 +
Chr2	stalkie_big_nohaplotig	exon	6377850	6378008	100	+	.	Parent=FBgn0033174.1.mrna1;Target=FBgn0033174.1 1094 1252 +
Chr2	stalkie_big_nohaplotig	exon	6378077	6378234	100	+	.	Parent=FBgn0033174.1.mrna1;Target=FBgn0033174.1 1253 1410 +
Chr2	stalkie_big_nohaplotig	CDS	6376277	6376364	.	+	0	Parent=FBgn0033174.1.mrna1;Target=FBgn0033174.1 1 88 +
Chr2	stalkie_big_nohaplotig	CDS	6376447	6376870	.	+	2	Parent=FBgn0033174.1.mrna1;Target=FBgn0033174.1 89 512 +
Chr2	stalkie_big_nohaplotig	CDS	6376938	6377518	.	+	1	Parent=FBgn0033174.1.mrna1;Target=FBgn0033174.1 513 1093 +
Chr2	stalkie_big_nohaplotig	CDS	6377850	6378008	.	+	2	Parent=FBgn0033174.1.mrna1;Target=FBgn0033174.1 1094 1252 +
Chr2	stalkie_big_nohaplotig	CDS	6378077	6378234	.	+	2	Parent=FBgn0033174.1.mrna1;Target=FBgn0033174.1 1253 1410 +
Chr2	gffcl	locus	6401915	6408800	.	-	.	ID=RLOC_00014392;geneIDs=FBgn0025885.1.path1;transcripts=FBgn0025885.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6401915	6408800	.	-	.	ID=FBgn0025885.1.mrna1;geneID=FBgn0025885.1.path1;Name=FBgn0025885.1;Dir=sensecoverage=100.0;identity=99.7;matches=1735;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014392
Chr2	stalkie_big_nohaplotig	exon	6401915	6402073	100	-	.	Parent=FBgn0025885.1.mrna1;Target=FBgn0025885.1 1582 1740 +
Chr2	stalkie_big_nohaplotig	exon	6402146	6402613	99	-	.	Parent=FBgn0025885.1.mrna1;Target=FBgn0025885.1 1114 1581 +
Chr2	stalkie_big_nohaplotig	exon	6402731	6402973	100	-	.	Parent=FBgn0025885.1.mrna1;Target=FBgn0025885.1 871 1113 +
Chr2	stalkie_big_nohaplotig	exon	6403029	6403727	99	-	.	Parent=FBgn0025885.1.mrna1;Target=FBgn0025885.1 172 870 +
Chr2	stalkie_big_nohaplotig	exon	6408630	6408800	100	-	.	Parent=FBgn0025885.1.mrna1;Target=FBgn0025885.1 1 171 +
Chr2	stalkie_big_nohaplotig	CDS	6401915	6402073	.	-	0	Parent=FBgn0025885.1.mrna1;Target=FBgn0025885.1 1582 1740 +
Chr2	stalkie_big_nohaplotig	CDS	6402146	6402613	.	-	0	Parent=FBgn0025885.1.mrna1;Target=FBgn0025885.1 1114 1581 +
Chr2	stalkie_big_nohaplotig	CDS	6402731	6402973	.	-	0	Parent=FBgn0025885.1.mrna1;Target=FBgn0025885.1 871 1113 +
Chr2	stalkie_big_nohaplotig	CDS	6403029	6403727	.	-	0	Parent=FBgn0025885.1.mrna1;Target=FBgn0025885.1 172 870 +
Chr2	stalkie_big_nohaplotig	CDS	6408630	6408800	.	-	0	Parent=FBgn0025885.1.mrna1;Target=FBgn0025885.1 1 171 +
Chr2	gffcl	locus	6414717	6417353	.	-	.	ID=RLOC_00014393;geneIDs=FBgn0033177.1.path1;transcripts=FBgn0033177.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6414717	6417353	.	-	.	ID=FBgn0033177.1.mrna1;geneID=FBgn0033177.1.path1;Name=FBgn0033177.1;Dir=sensecoverage=100.0;identity=99.5;matches=2268;mismatches=12;indels=0;unknowns=0;locus=RLOC_00014393
Chr2	stalkie_big_nohaplotig	exon	6414717	6415296	99	-	.	Parent=FBgn0033177.1.mrna1;Target=FBgn0033177.1 1701 2280 +
Chr2	stalkie_big_nohaplotig	exon	6415423	6415963	99	-	.	Parent=FBgn0033177.1.mrna1;Target=FBgn0033177.1 1160 1700 +
Chr2	stalkie_big_nohaplotig	exon	6416028	6416658	99	-	.	Parent=FBgn0033177.1.mrna1;Target=FBgn0033177.1 529 1159 +
Chr2	stalkie_big_nohaplotig	exon	6416726	6417010	100	-	.	Parent=FBgn0033177.1.mrna1;Target=FBgn0033177.1 244 528 +
Chr2	stalkie_big_nohaplotig	exon	6417111	6417353	99	-	.	Parent=FBgn0033177.1.mrna1;Target=FBgn0033177.1 1 243 +
Chr2	stalkie_big_nohaplotig	CDS	6414717	6415296	.	-	1	Parent=FBgn0033177.1.mrna1;Target=FBgn0033177.1 1701 2280 +
Chr2	stalkie_big_nohaplotig	CDS	6415423	6415963	.	-	2	Parent=FBgn0033177.1.mrna1;Target=FBgn0033177.1 1160 1700 +
Chr2	stalkie_big_nohaplotig	CDS	6416028	6416658	.	-	0	Parent=FBgn0033177.1.mrna1;Target=FBgn0033177.1 529 1159 +
Chr2	stalkie_big_nohaplotig	CDS	6416726	6417010	.	-	0	Parent=FBgn0033177.1.mrna1;Target=FBgn0033177.1 244 528 +
Chr2	stalkie_big_nohaplotig	CDS	6417111	6417353	.	-	0	Parent=FBgn0033177.1.mrna1;Target=FBgn0033177.1 1 243 +
Chr2	gffcl	locus	6422948	6424540	.	+	.	ID=RLOC_00014394;geneIDs=FBgn0033812.1.path1;transcripts=FBgn0033812.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6422948	6424540	.	+	.	ID=FBgn0033812.1.mrna1;geneID=FBgn0033812.1.path1;Name=FBgn0033812.1;Dir=sensecoverage=100.0;identity=99.9;matches=1325;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014394
Chr2	stalkie_big_nohaplotig	exon	6422948	6423540	99	+	.	Parent=FBgn0033812.1.mrna1;Target=FBgn0033812.1 1 593 +
Chr2	stalkie_big_nohaplotig	exon	6423609	6423835	100	+	.	Parent=FBgn0033812.1.mrna1;Target=FBgn0033812.1 594 820 +
Chr2	stalkie_big_nohaplotig	exon	6424035	6424540	100	+	.	Parent=FBgn0033812.1.mrna1;Target=FBgn0033812.1 821 1326 +
Chr2	stalkie_big_nohaplotig	CDS	6422948	6423540	.	+	0	Parent=FBgn0033812.1.mrna1;Target=FBgn0033812.1 1 593 +
Chr2	stalkie_big_nohaplotig	CDS	6423609	6423835	.	+	1	Parent=FBgn0033812.1.mrna1;Target=FBgn0033812.1 594 820 +
Chr2	stalkie_big_nohaplotig	CDS	6424035	6424540	.	+	2	Parent=FBgn0033812.1.mrna1;Target=FBgn0033812.1 821 1326 +
Chr2	gffcl	locus	6458926	6490603	.	+	.	ID=RLOC_00014395;geneIDs=FBgn0033166.1.path1;transcripts=FBgn0033166.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6458926	6490603	.	+	.	ID=FBgn0033166.1.mrna1;geneID=FBgn0033166.1.path1;Name=FBgn0033166.1;Dir=sensecoverage=82.1;identity=98.5;matches=1843;mismatches=4;indels=24;unknowns=0;locus=RLOC_00014395
Chr2	stalkie_big_nohaplotig	exon	6458926	6459502	99	+	.	Parent=FBgn0033166.1.mrna1;Target=FBgn0033166.1 1 577 +
Chr2	stalkie_big_nohaplotig	exon	6462853	6462945	100	+	.	Parent=FBgn0033166.1.mrna1;Target=FBgn0033166.1 578 670 +
Chr2	stalkie_big_nohaplotig	exon	6485807	6485945	100	+	.	Parent=FBgn0033166.1.mrna1;Target=FBgn0033166.1 671 809 +
Chr2	stalkie_big_nohaplotig	exon	6486013	6486137	100	+	.	Parent=FBgn0033166.1.mrna1;Target=FBgn0033166.1 810 934 +
Chr2	stalkie_big_nohaplotig	exon	6486201	6486291	100	+	.	Parent=FBgn0033166.1.mrna1;Target=FBgn0033166.1 935 1025 +
Chr2	stalkie_big_nohaplotig	exon	6489677	6490286	96	+	.	Parent=FBgn0033166.1.mrna1;Target=FBgn0033166.1 1026 1617 +
Chr2	stalkie_big_nohaplotig	exon	6490374	6490603	97	+	.	Parent=FBgn0033166.1.mrna1;Target=FBgn0033166.1 1618 1853 +
Chr2	stalkie_big_nohaplotig	CDS	6458926	6459502	.	+	0	Parent=FBgn0033166.1.mrna1;Target=FBgn0033166.1 1 577 +
Chr2	stalkie_big_nohaplotig	CDS	6462853	6462945	.	+	2	Parent=FBgn0033166.1.mrna1;Target=FBgn0033166.1 578 670 +
Chr2	stalkie_big_nohaplotig	CDS	6485807	6485945	.	+	2	Parent=FBgn0033166.1.mrna1;Target=FBgn0033166.1 671 809 +
Chr2	stalkie_big_nohaplotig	CDS	6486013	6486137	.	+	1	Parent=FBgn0033166.1.mrna1;Target=FBgn0033166.1 810 934 +
Chr2	stalkie_big_nohaplotig	CDS	6486201	6486291	.	+	2	Parent=FBgn0033166.1.mrna1;Target=FBgn0033166.1 935 1025 +
Chr2	stalkie_big_nohaplotig	CDS	6489677	6490286	.	+	1	Parent=FBgn0033166.1.mrna1;Target=FBgn0033166.1 1026 1617 +
Chr2	stalkie_big_nohaplotig	CDS	6490374	6490603	.	+	0	Parent=FBgn0033166.1.mrna1;Target=FBgn0033166.1 1618 1853 +
Chr2	gffcl	locus	6473113	6473995	.	-	.	ID=RLOC_00014396;geneIDs=comp144769_c0_seq1.path1;transcripts=comp144769_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6473113	6473995	.	-	.	ID=comp144769_c0_seq1.mrna1;geneID=comp144769_c0_seq1.path1;Name=comp144769_c0_seq1;Dir=sensecoverage=83.0;identity=98.0;matches=804;mismatches=15;indels=1;unknowns=0;Target=comp144769_c0_seq1 28 114 +;locus=RLOC_00014396
Chr2	stalkie_big_nohaplotig	exon	6473113	6473569	98	-	.	Parent=comp144769_c0_seq1.mrna1;Target=comp144769_c0_seq1 390 846 +
Chr2	stalkie_big_nohaplotig	exon	6473634	6473995	97	-	.	Parent=comp144769_c0_seq1.mrna1;Target=comp144769_c0_seq1 27 389 +
Chr2	stalkie_big_nohaplotig	CDS	6473909	6473994	.	-	0	Parent=comp144769_c0_seq1.mrna1
Chr2	gffcl	locus	6477561	6478568	.	+	.	ID=RLOC_00014397;geneIDs=comp149720_c0_seq1.path1;transcripts=comp149720_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6477561	6478568	.	+	.	ID=comp149720_c0_seq1.mrna1;geneID=comp149720_c0_seq1.path1;Name=comp149720_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=1003;mismatches=5;indels=15;unknowns=0;Target=comp149720_c0_seq1 1023 1 .;CDS_Target=comp149720_c0_seq1 667 488 .;locus=RLOC_00014397
Chr2	stalkie_big_nohaplotig	exon	6477561	6478568	98	+	.	Parent=comp149720_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	6478039	6478218	.	+	0	Parent=comp149720_c0_seq1.mrna1
Chr2	gffcl	locus	6491671	6493309	.	.	.	ID=RLOC_00014398;geneIDs=comp65055_c0_seq1.path1,comp157945_c0_seq1.path1;transcripts=comp65055_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6491671	6492506	.	-	.	ID=comp65055_c0_seq1.mrna1;geneID=comp65055_c0_seq1.path1;Name=comp65055_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=828;mismatches=2;indels=7;unknowns=0;Target=comp65055_c0_seq1 831 1 .;CDS_Target=comp65055_c0_seq1 828 736 .;locus=RLOC_00014398
Chr2	stalkie_big_nohaplotig	exon	6491671	6492506	98	-	.	Parent=comp65055_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	6491674	6491766	.	-	0	Parent=comp65055_c0_seq1.mrna1
Chr2	gffcl	locus	6493583	6493797	.	+	.	ID=RLOC_00014399;geneIDs=comp151116_c0_seq1.path1;transcripts=comp151116_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6493583	6493797	.	+	.	ID=comp151116_c0_seq1.mrna1;geneID=comp151116_c0_seq1.path1;Name=comp151116_c0_seq1;Dir=indeterminatecoverage=90.3;identity=99.5;matches=214;mismatches=1;indels=0;unknowns=0;Target=comp151116_c0_seq1 238 24 .;CDS_Target=comp151116_c0_seq1 127 26 .;locus=RLOC_00014399
Chr2	stalkie_big_nohaplotig	exon	6493583	6493797	99	+	.	Parent=comp151116_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	6493585	6493686	.	+	0	Parent=comp151116_c0_seq1.mrna1
Chr2	gffcl	locus	6496656	6498256	.	+	.	ID=RLOC_00014400;geneIDs=FBgn0033162.1.path1;transcripts=FBgn0033162.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6496656	6498256	.	+	.	ID=FBgn0033162.1.mrna1;geneID=FBgn0033162.1.path1;Name=FBgn0033162.1;Dir=sensecoverage=100.0;identity=99.0;matches=719;mismatches=7;indels=0;unknowns=0;locus=RLOC_00014400
Chr2	stalkie_big_nohaplotig	exon	6496656	6496922	98	+	.	Parent=FBgn0033162.1.mrna1;Target=FBgn0033162.1 1 267 +
Chr2	stalkie_big_nohaplotig	exon	6496990	6497126	100	+	.	Parent=FBgn0033162.1.mrna1;Target=FBgn0033162.1 268 404 +
Chr2	stalkie_big_nohaplotig	exon	6497456	6497542	98	+	.	Parent=FBgn0033162.1.mrna1;Target=FBgn0033162.1 405 491 +
Chr2	stalkie_big_nohaplotig	exon	6497954	6498067	100	+	.	Parent=FBgn0033162.1.mrna1;Target=FBgn0033162.1 492 605 +
Chr2	stalkie_big_nohaplotig	exon	6498136	6498256	98	+	.	Parent=FBgn0033162.1.mrna1;Target=FBgn0033162.1 606 726 +
Chr2	stalkie_big_nohaplotig	CDS	6496656	6496922	.	+	0	Parent=FBgn0033162.1.mrna1;Target=FBgn0033162.1 1 267 +
Chr2	stalkie_big_nohaplotig	CDS	6496990	6497126	.	+	0	Parent=FBgn0033162.1.mrna1;Target=FBgn0033162.1 268 404 +
Chr2	stalkie_big_nohaplotig	CDS	6497456	6497542	.	+	1	Parent=FBgn0033162.1.mrna1;Target=FBgn0033162.1 405 491 +
Chr2	stalkie_big_nohaplotig	CDS	6497954	6498067	.	+	1	Parent=FBgn0033162.1.mrna1;Target=FBgn0033162.1 492 605 +
Chr2	stalkie_big_nohaplotig	CDS	6498136	6498256	.	+	1	Parent=FBgn0033162.1.mrna1;Target=FBgn0033162.1 606 726 +
Chr2	gffcl	locus	6503327	6505803	.	+	.	ID=RLOC_00014401;geneIDs=FBgn0041243.1.path1;transcripts=FBgn0041243.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6503327	6505803	.	+	.	ID=FBgn0041243.1.mrna1;geneID=FBgn0041243.1.path1;Name=FBgn0041243.1;Dir=sensecoverage=100.0;identity=99.5;matches=1066;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014401
Chr2	stalkie_big_nohaplotig	exon	6503327	6503473	100	+	.	Parent=FBgn0041243.1.mrna1;Target=FBgn0041243.1 1 147 +
Chr2	stalkie_big_nohaplotig	exon	6503550	6503649	100	+	.	Parent=FBgn0041243.1.mrna1;Target=FBgn0041243.1 148 247 +
Chr2	stalkie_big_nohaplotig	exon	6503710	6503772	100	+	.	Parent=FBgn0041243.1.mrna1;Target=FBgn0041243.1 248 310 +
Chr2	stalkie_big_nohaplotig	exon	6503857	6504000	100	+	.	Parent=FBgn0041243.1.mrna1;Target=FBgn0041243.1 311 454 +
Chr2	stalkie_big_nohaplotig	exon	6504070	6504195	100	+	.	Parent=FBgn0041243.1.mrna1;Target=FBgn0041243.1 455 580 +
Chr2	stalkie_big_nohaplotig	exon	6504292	6504370	96	+	.	Parent=FBgn0041243.1.mrna1;Target=FBgn0041243.1 581 659 +
Chr2	stalkie_big_nohaplotig	exon	6504450	6504642	98	+	.	Parent=FBgn0041243.1.mrna1;Target=FBgn0041243.1 660 852 +
Chr2	stalkie_big_nohaplotig	exon	6504705	6504773	100	+	.	Parent=FBgn0041243.1.mrna1;Target=FBgn0041243.1 853 921 +
Chr2	stalkie_big_nohaplotig	exon	6505601	6505690	100	+	.	Parent=FBgn0041243.1.mrna1;Target=FBgn0041243.1 922 1011 +
Chr2	stalkie_big_nohaplotig	exon	6505744	6505803	100	+	.	Parent=FBgn0041243.1.mrna1;Target=FBgn0041243.1 1012 1071 +
Chr2	stalkie_big_nohaplotig	CDS	6503327	6503473	.	+	0	Parent=FBgn0041243.1.mrna1;Target=FBgn0041243.1 1 147 +
Chr2	stalkie_big_nohaplotig	CDS	6503550	6503649	.	+	0	Parent=FBgn0041243.1.mrna1;Target=FBgn0041243.1 148 247 +
Chr2	stalkie_big_nohaplotig	CDS	6503710	6503772	.	+	2	Parent=FBgn0041243.1.mrna1;Target=FBgn0041243.1 248 310 +
Chr2	stalkie_big_nohaplotig	CDS	6503857	6504000	.	+	2	Parent=FBgn0041243.1.mrna1;Target=FBgn0041243.1 311 454 +
Chr2	stalkie_big_nohaplotig	CDS	6504070	6504195	.	+	2	Parent=FBgn0041243.1.mrna1;Target=FBgn0041243.1 455 580 +
Chr2	stalkie_big_nohaplotig	CDS	6504292	6504370	.	+	2	Parent=FBgn0041243.1.mrna1;Target=FBgn0041243.1 581 659 +
Chr2	stalkie_big_nohaplotig	CDS	6504450	6504642	.	+	1	Parent=FBgn0041243.1.mrna1;Target=FBgn0041243.1 660 852 +
Chr2	stalkie_big_nohaplotig	CDS	6504705	6504773	.	+	0	Parent=FBgn0041243.1.mrna1;Target=FBgn0041243.1 853 921 +
Chr2	stalkie_big_nohaplotig	CDS	6505601	6505690	.	+	0	Parent=FBgn0041243.1.mrna1;Target=FBgn0041243.1 922 1011 +
Chr2	stalkie_big_nohaplotig	CDS	6505744	6505803	.	+	0	Parent=FBgn0041243.1.mrna1;Target=FBgn0041243.1 1012 1071 +
Chr2	gffcl	locus	6506803	6511242	.	-	.	ID=RLOC_00014402;geneIDs=FBgn0033160.1.path1,comp160560_c0_seq1.path1;transcripts=FBgn0033160.1.mrna1,comp160560_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6506803	6510811	.	-	.	ID=FBgn0033160.1.mrna1;geneID=FBgn0033160.1.path1;Name=FBgn0033160.1;Dir=sensecoverage=99.3;identity=99.6;matches=2111;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014402
Chr2	stalkie_big_nohaplotig	exon	6506803	6506927	100	-	.	Parent=FBgn0033160.1.mrna1;Target=FBgn0033160.1 2009 2133 +
Chr2	stalkie_big_nohaplotig	exon	6507235	6507588	99	-	.	Parent=FBgn0033160.1.mrna1;Target=FBgn0033160.1 1655 2008 +
Chr2	stalkie_big_nohaplotig	exon	6507681	6507803	100	-	.	Parent=FBgn0033160.1.mrna1;Target=FBgn0033160.1 1532 1654 +
Chr2	stalkie_big_nohaplotig	exon	6509169	6509432	100	-	.	Parent=FBgn0033160.1.mrna1;Target=FBgn0033160.1 1268 1531 +
Chr2	stalkie_big_nohaplotig	exon	6509496	6509969	99	-	.	Parent=FBgn0033160.1.mrna1;Target=FBgn0033160.1 794 1267 +
Chr2	stalkie_big_nohaplotig	exon	6510033	6510811	99	-	.	Parent=FBgn0033160.1.mrna1;Target=FBgn0033160.1 15 793 +
Chr2	stalkie_big_nohaplotig	CDS	6506803	6506927	.	-	2	Parent=FBgn0033160.1.mrna1;Target=FBgn0033160.1 2009 2133 +
Chr2	stalkie_big_nohaplotig	CDS	6507235	6507588	.	-	2	Parent=FBgn0033160.1.mrna1;Target=FBgn0033160.1 1655 2008 +
Chr2	stalkie_big_nohaplotig	CDS	6507681	6507803	.	-	2	Parent=FBgn0033160.1.mrna1;Target=FBgn0033160.1 1532 1654 +
Chr2	stalkie_big_nohaplotig	CDS	6509169	6509432	.	-	2	Parent=FBgn0033160.1.mrna1;Target=FBgn0033160.1 1268 1531 +
Chr2	stalkie_big_nohaplotig	CDS	6509496	6509969	.	-	2	Parent=FBgn0033160.1.mrna1;Target=FBgn0033160.1 794 1267 +
Chr2	stalkie_big_nohaplotig	CDS	6510033	6510810	.	-	0	Parent=FBgn0033160.1.mrna1;Target=FBgn0033160.1 16 793 +
Chr2	stalkie_big_nohaplotig	mRNA	6507336	6511242	.	-	.	ID=comp160560_c0_seq1.mrna1;geneID=comp160560_c0_seq1.path1;Name=comp160560_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=2204;mismatches=10;indels=1;unknowns=0;locus=RLOC_00014402
Chr2	stalkie_big_nohaplotig	exon	6507336	6507588	100	-	.	Parent=comp160560_c0_seq1.mrna1;Target=comp160560_c0_seq1 1964 2216 +
Chr2	stalkie_big_nohaplotig	exon	6507681	6507803	100	-	.	Parent=comp160560_c0_seq1.mrna1;Target=comp160560_c0_seq1 1841 1963 +
Chr2	stalkie_big_nohaplotig	exon	6509169	6509432	100	-	.	Parent=comp160560_c0_seq1.mrna1;Target=comp160560_c0_seq1 1577 1840 +
Chr2	stalkie_big_nohaplotig	exon	6509496	6509969	99	-	.	Parent=comp160560_c0_seq1.mrna1;Target=comp160560_c0_seq1 1103 1576 +
Chr2	stalkie_big_nohaplotig	exon	6510033	6510811	99	-	.	Parent=comp160560_c0_seq1.mrna1;Target=comp160560_c0_seq1 324 1102 +
Chr2	stalkie_big_nohaplotig	exon	6510922	6511242	98	-	.	Parent=comp160560_c0_seq1.mrna1;Target=comp160560_c0_seq1 2 323 +
Chr2	stalkie_big_nohaplotig	CDS	6510806	6510811	.	-	1	Parent=comp160560_c0_seq1.mrna1;Target=comp160560_c0_seq1 324 329 +
Chr2	stalkie_big_nohaplotig	CDS	6510922	6510971	.	-	0	Parent=comp160560_c0_seq1.mrna1;Target=comp160560_c0_seq1 273 323 +
Chr2	gffcl	locus	6516100	6519825	.	+	.	ID=RLOC_00014403;geneIDs=FBgn0000352.1.path1;transcripts=FBgn0000352.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6516100	6519825	.	+	.	ID=FBgn0000352.1.mrna1;geneID=FBgn0000352.1.path1;Name=FBgn0000352.1;Dir=sensecoverage=100.0;identity=99.5;matches=3593;mismatches=19;indels=0;unknowns=0;locus=RLOC_00014403
Chr2	stalkie_big_nohaplotig	exon	6516100	6517400	99	+	.	Parent=FBgn0000352.1.mrna1;Target=FBgn0000352.1 1 1301 +
Chr2	stalkie_big_nohaplotig	exon	6517458	6517906	99	+	.	Parent=FBgn0000352.1.mrna1;Target=FBgn0000352.1 1302 1750 +
Chr2	stalkie_big_nohaplotig	exon	6517964	6519825	99	+	.	Parent=FBgn0000352.1.mrna1;Target=FBgn0000352.1 1751 3612 +
Chr2	stalkie_big_nohaplotig	CDS	6516100	6517400	.	+	0	Parent=FBgn0000352.1.mrna1;Target=FBgn0000352.1 1 1301 +
Chr2	stalkie_big_nohaplotig	CDS	6517458	6517906	.	+	1	Parent=FBgn0000352.1.mrna1;Target=FBgn0000352.1 1302 1750 +
Chr2	stalkie_big_nohaplotig	CDS	6517964	6519825	.	+	2	Parent=FBgn0000352.1.mrna1;Target=FBgn0000352.1 1751 3612 +
Chr2	gffcl	locus	6520396	6521317	.	+	.	ID=RLOC_00014404;geneIDs=comp154586_c0_seq1.path1;transcripts=comp154586_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6520396	6521317	.	+	.	ID=comp154586_c0_seq1.mrna1;geneID=comp154586_c0_seq1.path1;Name=comp154586_c0_seq1;Dir=indeterminatecoverage=92.5;identity=96.0;matches=902;mismatches=20;indels=18;unknowns=0;Target=comp154586_c0_seq1 940 1 .;CDS_Target=comp154586_c0_seq1 940 866 .;locus=RLOC_00014404
Chr2	stalkie_big_nohaplotig	exon	6520396	6521317	95	+	.	Parent=comp154586_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	6521243	6521317	.	+	0	Parent=comp154586_c0_seq1.mrna1
Chr2	gffcl	locus	6521469	6522062	.	+	.	ID=RLOC_00014405;geneIDs=comp156853_c0_seq1.path1;transcripts=comp156853_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6521469	6522062	.	+	.	ID=comp156853_c0_seq1.mrna1;geneID=comp156853_c0_seq1.path1;Name=comp156853_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.2;matches=567;mismatches=21;indels=27;unknowns=0;Target=comp156853_c0_seq1 609 1 .;CDS_Target=comp156853_c0_seq1 469 377 .;locus=RLOC_00014405
Chr2	stalkie_big_nohaplotig	exon	6521469	6522062	92	+	.	Parent=comp156853_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	6521824	6521922	.	+	0	Parent=comp156853_c0_seq1.mrna1
Chr2	gffcl	locus	6522470	6523222	.	+	.	ID=RLOC_00014406;geneIDs=comp136741_c0_seq1.path1;transcripts=comp136741_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6522470	6523222	.	+	.	ID=comp136741_c0_seq1.mrna1;geneID=comp136741_c0_seq1.path1;Name=comp136741_c0_seq1;Dir=indeterminatecoverage=97.7;identity=98.8;matches=745;mismatches=8;indels=1;unknowns=0;Target=comp136741_c0_seq1 771 18 .;CDS_Target=comp136741_c0_seq1 699 568 .;locus=RLOC_00014406
Chr2	stalkie_big_nohaplotig	exon	6522470	6523222	98	+	.	Parent=comp136741_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	6523019	6523150	.	+	0	Parent=comp136741_c0_seq1.mrna1
Chr2	gffcl	locus	6547910	6641445	.	+	.	ID=RLOC_00014407;geneIDs=FBgn0033159.1.path1;transcripts=FBgn0033159.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6547910	6641445	.	+	.	ID=FBgn0033159.1.mrna1;geneID=FBgn0033159.1.path1;Name=FBgn0033159.1;Dir=sensecoverage=97.5;identity=99.8;matches=6003;mismatches=12;indels=0;unknowns=0;locus=RLOC_00014407
Chr2	stalkie_big_nohaplotig	exon	6547910	6548249	98	+	.	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 154 493 +
Chr2	stalkie_big_nohaplotig	exon	6555021	6555182	98	+	.	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 494 655 +
Chr2	stalkie_big_nohaplotig	exon	6562305	6562454	100	+	.	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 656 805 +
Chr2	stalkie_big_nohaplotig	exon	6572376	6572499	100	+	.	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 806 929 +
Chr2	stalkie_big_nohaplotig	exon	6589684	6590528	99	+	.	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 930 1774 +
Chr2	stalkie_big_nohaplotig	exon	6590600	6590761	100	+	.	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 1775 1936 +
Chr2	stalkie_big_nohaplotig	exon	6596179	6596469	99	+	.	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 1937 2227 +
Chr2	stalkie_big_nohaplotig	exon	6612508	6612627	100	+	.	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 2228 2347 +
Chr2	stalkie_big_nohaplotig	exon	6612902	6614128	99	+	.	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 2348 3574 +
Chr2	stalkie_big_nohaplotig	exon	6614184	6614339	100	+	.	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 3575 3730 +
Chr2	stalkie_big_nohaplotig	exon	6614410	6615093	100	+	.	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 3731 4414 +
Chr2	stalkie_big_nohaplotig	exon	6615156	6615264	100	+	.	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 4415 4523 +
Chr2	stalkie_big_nohaplotig	exon	6615325	6615501	100	+	.	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 4524 4700 +
Chr2	stalkie_big_nohaplotig	exon	6615610	6615776	100	+	.	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 4701 4867 +
Chr2	stalkie_big_nohaplotig	exon	6623994	6624206	100	+	.	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 4868 5080 +
Chr2	stalkie_big_nohaplotig	exon	6628370	6628525	99	+	.	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 5081 5236 +
Chr2	stalkie_big_nohaplotig	exon	6630484	6630627	100	+	.	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 5237 5380 +
Chr2	stalkie_big_nohaplotig	exon	6632054	6632361	100	+	.	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 5381 5688 +
Chr2	stalkie_big_nohaplotig	exon	6632433	6632613	100	+	.	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 5689 5869 +
Chr2	stalkie_big_nohaplotig	exon	6633988	6634146	100	+	.	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 5870 6028 +
Chr2	stalkie_big_nohaplotig	exon	6637500	6637566	100	+	.	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 6029 6095 +
Chr2	stalkie_big_nohaplotig	exon	6641373	6641445	100	+	.	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 6096 6168 +
Chr2	stalkie_big_nohaplotig	CDS	6547910	6548249	.	+	0	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 154 493 +
Chr2	stalkie_big_nohaplotig	CDS	6555021	6555182	.	+	2	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 494 655 +
Chr2	stalkie_big_nohaplotig	CDS	6562305	6562454	.	+	2	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 656 805 +
Chr2	stalkie_big_nohaplotig	CDS	6572376	6572499	.	+	2	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 806 929 +
Chr2	stalkie_big_nohaplotig	CDS	6589684	6590528	.	+	1	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 930 1774 +
Chr2	stalkie_big_nohaplotig	CDS	6590600	6590761	.	+	2	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 1775 1936 +
Chr2	stalkie_big_nohaplotig	CDS	6596179	6596469	.	+	2	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 1937 2227 +
Chr2	stalkie_big_nohaplotig	CDS	6612508	6612627	.	+	2	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 2228 2347 +
Chr2	stalkie_big_nohaplotig	CDS	6612902	6614128	.	+	2	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 2348 3574 +
Chr2	stalkie_big_nohaplotig	CDS	6614184	6614339	.	+	2	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 3575 3730 +
Chr2	stalkie_big_nohaplotig	CDS	6614410	6615093	.	+	2	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 3731 4414 +
Chr2	stalkie_big_nohaplotig	CDS	6615156	6615264	.	+	2	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 4415 4523 +
Chr2	stalkie_big_nohaplotig	CDS	6615325	6615501	.	+	1	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 4524 4700 +
Chr2	stalkie_big_nohaplotig	CDS	6615610	6615776	.	+	1	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 4701 4867 +
Chr2	stalkie_big_nohaplotig	CDS	6623994	6624206	.	+	2	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 4868 5080 +
Chr2	stalkie_big_nohaplotig	CDS	6628370	6628525	.	+	2	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 5081 5236 +
Chr2	stalkie_big_nohaplotig	CDS	6630484	6630627	.	+	2	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 5237 5380 +
Chr2	stalkie_big_nohaplotig	CDS	6632054	6632361	.	+	2	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 5381 5688 +
Chr2	stalkie_big_nohaplotig	CDS	6632433	6632613	.	+	0	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 5689 5869 +
Chr2	stalkie_big_nohaplotig	CDS	6633988	6634146	.	+	2	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 5870 6028 +
Chr2	stalkie_big_nohaplotig	CDS	6637500	6637566	.	+	2	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 6029 6095 +
Chr2	stalkie_big_nohaplotig	CDS	6641373	6641445	.	+	1	Parent=FBgn0033159.1.mrna1;Target=FBgn0033159.1 6096 6168 +
Chr2	gffcl	locus	6642144	6644384	.	-	.	ID=RLOC_00014408;geneIDs=comp163172_c0_seq1.path1;transcripts=comp163172_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6642144	6644384	.	-	.	ID=comp163172_c0_seq1.mrna1;geneID=comp163172_c0_seq1.path1;Name=comp163172_c0_seq1;Dir=indeterminatecoverage=99.3;identity=97.9;matches=2214;mismatches=20;indels=27;unknowns=0;Target=comp163172_c0_seq1 2271 18 .;CDS_Target=comp163172_c0_seq1 1689 1492 .;locus=RLOC_00014408
Chr2	stalkie_big_nohaplotig	exon	6642144	6644384	97	-	.	Parent=comp163172_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	6642726	6642923	.	-	0	Parent=comp163172_c0_seq1.mrna1
Chr2	gffcl	locus	6676471	6679420	.	-	.	ID=RLOC_00014409;geneIDs=comp149920_c0_seq1.path1;transcripts=comp149920_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6676471	6679420	.	-	.	ID=comp149920_c0_seq1.mrna1;geneID=comp149920_c0_seq1.path1;Name=comp149920_c0_seq1;Dir=sensecoverage=98.5;identity=98.0;matches=785;mismatches=16;indels=0;unknowns=0;locus=RLOC_00014409
Chr2	stalkie_big_nohaplotig	exon	6676471	6676698	94	-	.	Parent=comp149920_c0_seq1.mrna1;Target=comp149920_c0_seq1 583 810 +
Chr2	stalkie_big_nohaplotig	exon	6676951	6677069	98	-	.	Parent=comp149920_c0_seq1.mrna1;Target=comp149920_c0_seq1 464 582 +
Chr2	stalkie_big_nohaplotig	exon	6678967	6679420	99	-	.	Parent=comp149920_c0_seq1.mrna1;Target=comp149920_c0_seq1 10 463 +
Chr2	stalkie_big_nohaplotig	CDS	6676990	6677069	.	-	2	Parent=comp149920_c0_seq1.mrna1;Target=comp149920_c0_seq1 464 543 +
Chr2	stalkie_big_nohaplotig	CDS	6678967	6679015	.	-	0	Parent=comp149920_c0_seq1.mrna1;Target=comp149920_c0_seq1 415 463 +
Chr2	gffcl	locus	6797425	6805139	.	+	.	ID=RLOC_00014410;geneIDs=FBgn0025830.1.path1;transcripts=FBgn0025830.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6797425	6805139	.	+	.	ID=FBgn0025830.1.mrna1;geneID=FBgn0025830.1.path1;Name=FBgn0025830.1;Dir=sensecoverage=100.0;identity=99.6;matches=3072;mismatches=12;indels=0;unknowns=0;locus=RLOC_00014410
Chr2	stalkie_big_nohaplotig	exon	6797425	6797593	100	+	.	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 1 169 +
Chr2	stalkie_big_nohaplotig	exon	6797655	6797894	100	+	.	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 170 409 +
Chr2	stalkie_big_nohaplotig	exon	6797949	6798068	100	+	.	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 410 529 +
Chr2	stalkie_big_nohaplotig	exon	6798255	6798375	97	+	.	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 530 650 +
Chr2	stalkie_big_nohaplotig	exon	6798442	6799150	99	+	.	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 651 1359 +
Chr2	stalkie_big_nohaplotig	exon	6799220	6799451	100	+	.	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 1360 1591 +
Chr2	stalkie_big_nohaplotig	exon	6800631	6800890	100	+	.	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 1592 1851 +
Chr2	stalkie_big_nohaplotig	exon	6800951	6801196	100	+	.	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 1852 2097 +
Chr2	stalkie_big_nohaplotig	exon	6801266	6801672	99	+	.	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 2098 2504 +
Chr2	stalkie_big_nohaplotig	exon	6801733	6801851	100	+	.	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 2505 2623 +
Chr2	stalkie_big_nohaplotig	exon	6802393	6802565	99	+	.	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 2624 2796 +
Chr2	stalkie_big_nohaplotig	exon	6802636	6802806	99	+	.	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 2797 2967 +
Chr2	stalkie_big_nohaplotig	exon	6805023	6805139	100	+	.	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 2968 3084 +
Chr2	stalkie_big_nohaplotig	CDS	6797425	6797593	.	+	0	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 1 169 +
Chr2	stalkie_big_nohaplotig	CDS	6797655	6797894	.	+	2	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 170 409 +
Chr2	stalkie_big_nohaplotig	CDS	6797949	6798068	.	+	2	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 410 529 +
Chr2	stalkie_big_nohaplotig	CDS	6798255	6798375	.	+	2	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 530 650 +
Chr2	stalkie_big_nohaplotig	CDS	6798442	6799150	.	+	1	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 651 1359 +
Chr2	stalkie_big_nohaplotig	CDS	6799220	6799451	.	+	0	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 1360 1591 +
Chr2	stalkie_big_nohaplotig	CDS	6800631	6800890	.	+	2	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 1592 1851 +
Chr2	stalkie_big_nohaplotig	CDS	6800951	6801196	.	+	0	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 1852 2097 +
Chr2	stalkie_big_nohaplotig	CDS	6801266	6801672	.	+	0	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 2098 2504 +
Chr2	stalkie_big_nohaplotig	CDS	6801733	6801851	.	+	1	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 2505 2623 +
Chr2	stalkie_big_nohaplotig	CDS	6802393	6802565	.	+	2	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 2624 2796 +
Chr2	stalkie_big_nohaplotig	CDS	6802636	6802806	.	+	0	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 2797 2967 +
Chr2	stalkie_big_nohaplotig	CDS	6805023	6805139	.	+	0	Parent=FBgn0025830.1.mrna1;Target=FBgn0025830.1 2968 3084 +
Chr2	gffcl	locus	6806252	6807690	.	-	.	ID=RLOC_00014411;geneIDs=FBgn0025832.1.path1;transcripts=FBgn0025832.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6806252	6807690	.	-	.	ID=FBgn0025832.1.mrna1;geneID=FBgn0025832.1.path1;Name=FBgn0025832.1;Dir=sensecoverage=100.0;identity=99.6;matches=1162;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014411
Chr2	stalkie_big_nohaplotig	exon	6806252	6806359	100	-	.	Parent=FBgn0025832.1.mrna1;Target=FBgn0025832.1 1060 1167 +
Chr2	stalkie_big_nohaplotig	exon	6806452	6806601	99	-	.	Parent=FBgn0025832.1.mrna1;Target=FBgn0025832.1 910 1059 +
Chr2	stalkie_big_nohaplotig	exon	6806662	6806880	99	-	.	Parent=FBgn0025832.1.mrna1;Target=FBgn0025832.1 691 909 +
Chr2	stalkie_big_nohaplotig	exon	6806938	6807521	99	-	.	Parent=FBgn0025832.1.mrna1;Target=FBgn0025832.1 107 690 +
Chr2	stalkie_big_nohaplotig	exon	6807585	6807690	100	-	.	Parent=FBgn0025832.1.mrna1;Target=FBgn0025832.1 1 106 +
Chr2	stalkie_big_nohaplotig	CDS	6806252	6806359	.	-	0	Parent=FBgn0025832.1.mrna1;Target=FBgn0025832.1 1060 1167 +
Chr2	stalkie_big_nohaplotig	CDS	6806452	6806601	.	-	0	Parent=FBgn0025832.1.mrna1;Target=FBgn0025832.1 910 1059 +
Chr2	stalkie_big_nohaplotig	CDS	6806662	6806880	.	-	0	Parent=FBgn0025832.1.mrna1;Target=FBgn0025832.1 691 909 +
Chr2	stalkie_big_nohaplotig	CDS	6806938	6807521	.	-	2	Parent=FBgn0025832.1.mrna1;Target=FBgn0025832.1 107 690 +
Chr2	stalkie_big_nohaplotig	CDS	6807585	6807690	.	-	0	Parent=FBgn0025832.1.mrna1;Target=FBgn0025832.1 1 106 +
Chr2	gffcl	locus	6814605	6815146	.	+	.	ID=RLOC_00014413;geneIDs=comp153181_c3_seq1.path1;transcripts=comp153181_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6814605	6815146	.	+	.	ID=comp153181_c3_seq1.mrna1;geneID=comp153181_c3_seq1.path1;Name=comp153181_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=538;mismatches=4;indels=0;unknowns=0;Target=comp153181_c3_seq1 542 1 .;CDS_Target=comp153181_c3_seq1 147 1 .;locus=RLOC_00014413
Chr2	stalkie_big_nohaplotig	exon	6814605	6815146	99	+	.	Parent=comp153181_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	6814605	6814751	.	+	0	Parent=comp153181_c3_seq1.mrna1
Chr2	gffcl	locus	6816601	6817792	.	+	.	ID=RLOC_00014414;geneIDs=comp154791_c0_seq1.path1;transcripts=comp154791_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6816601	6817792	.	+	.	ID=comp154791_c0_seq1.mrna1;geneID=comp154791_c0_seq1.path1;Name=comp154791_c0_seq1;Dir=indeterminatecoverage=92.8;identity=97.2;matches=1165;mismatches=7;indels=26;unknowns=0;Target=comp154791_c0_seq1 1260 83 .;CDS_Target=comp154791_c0_seq1 671 444 .;locus=RLOC_00014414
Chr2	stalkie_big_nohaplotig	exon	6816601	6817792	97	+	.	Parent=comp154791_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	6816976	6817203	.	+	0	Parent=comp154791_c0_seq1.mrna1
Chr2	gffcl	locus	6818500	6826624	.	-	.	ID=RLOC_00014415;geneIDs=comp162639_c0_seq1.path1;transcripts=comp162639_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6818500	6826624	.	-	.	ID=comp162639_c0_seq1.mrna1;geneID=comp162639_c0_seq1.path1;Name=comp162639_c0_seq1;Dir=antisensecoverage=99.6;identity=99.6;matches=2217;mismatches=4;indels=4;unknowns=0;Target=comp162639_c0_seq1 891 989 .;locus=RLOC_00014415
Chr2	stalkie_big_nohaplotig	exon	6818500	6819724	99	-	.	Parent=comp162639_c0_seq1.mrna1;Target=comp162639_c0_seq1 1 1229 -
Chr2	stalkie_big_nohaplotig	exon	6822168	6822354	99	-	.	Parent=comp162639_c0_seq1.mrna1;Target=comp162639_c0_seq1 1230 1416 -
Chr2	stalkie_big_nohaplotig	exon	6822564	6822656	98	-	.	Parent=comp162639_c0_seq1.mrna1;Target=comp162639_c0_seq1 1417 1509 -
Chr2	stalkie_big_nohaplotig	exon	6825909	6826624	100	-	.	Parent=comp162639_c0_seq1.mrna1;Target=comp162639_c0_seq1 1510 2225 -
Chr2	stalkie_big_nohaplotig	CDS	6819390	6819484	.	-	0	Parent=comp162639_c0_seq1.mrna1
Chr2	gffcl	locus	6828494	6832082	.	-	.	ID=RLOC_00014416;geneIDs=FBgn0014870.1.path1;transcripts=FBgn0014870.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6828494	6832082	.	-	.	ID=FBgn0014870.1.mrna1;geneID=FBgn0014870.1.path1;Name=FBgn0014870.1;Dir=sensecoverage=100.0;identity=100.0;matches=2274;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014416
Chr2	stalkie_big_nohaplotig	exon	6828494	6828841	100	-	.	Parent=FBgn0014870.1.mrna1;Target=FBgn0014870.1 1927 2274 +
Chr2	stalkie_big_nohaplotig	exon	6829587	6829774	100	-	.	Parent=FBgn0014870.1.mrna1;Target=FBgn0014870.1 1739 1926 +
Chr2	stalkie_big_nohaplotig	exon	6829842	6829906	100	-	.	Parent=FBgn0014870.1.mrna1;Target=FBgn0014870.1 1674 1738 +
Chr2	stalkie_big_nohaplotig	exon	6829989	6830401	100	-	.	Parent=FBgn0014870.1.mrna1;Target=FBgn0014870.1 1261 1673 +
Chr2	stalkie_big_nohaplotig	exon	6830458	6830610	100	-	.	Parent=FBgn0014870.1.mrna1;Target=FBgn0014870.1 1108 1260 +
Chr2	stalkie_big_nohaplotig	exon	6830670	6831044	100	-	.	Parent=FBgn0014870.1.mrna1;Target=FBgn0014870.1 733 1107 +
Chr2	stalkie_big_nohaplotig	exon	6831124	6831407	100	-	.	Parent=FBgn0014870.1.mrna1;Target=FBgn0014870.1 449 732 +
Chr2	stalkie_big_nohaplotig	exon	6831635	6832082	100	-	.	Parent=FBgn0014870.1.mrna1;Target=FBgn0014870.1 1 448 +
Chr2	stalkie_big_nohaplotig	CDS	6828494	6828841	.	-	0	Parent=FBgn0014870.1.mrna1;Target=FBgn0014870.1 1927 2274 +
Chr2	stalkie_big_nohaplotig	CDS	6829587	6829774	.	-	2	Parent=FBgn0014870.1.mrna1;Target=FBgn0014870.1 1739 1926 +
Chr2	stalkie_big_nohaplotig	CDS	6829842	6829906	.	-	1	Parent=FBgn0014870.1.mrna1;Target=FBgn0014870.1 1674 1738 +
Chr2	stalkie_big_nohaplotig	CDS	6829989	6830401	.	-	0	Parent=FBgn0014870.1.mrna1;Target=FBgn0014870.1 1261 1673 +
Chr2	stalkie_big_nohaplotig	CDS	6830458	6830610	.	-	0	Parent=FBgn0014870.1.mrna1;Target=FBgn0014870.1 1108 1260 +
Chr2	stalkie_big_nohaplotig	CDS	6830670	6831044	.	-	0	Parent=FBgn0014870.1.mrna1;Target=FBgn0014870.1 733 1107 +
Chr2	stalkie_big_nohaplotig	CDS	6831124	6831407	.	-	2	Parent=FBgn0014870.1.mrna1;Target=FBgn0014870.1 449 732 +
Chr2	stalkie_big_nohaplotig	CDS	6831635	6832082	.	-	0	Parent=FBgn0014870.1.mrna1;Target=FBgn0014870.1 1 448 +
Chr2	gffcl	locus	6836418	6836832	.	+	.	ID=RLOC_00014418;geneIDs=FBgn0034902.2.path1;transcripts=FBgn0034902.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6836418	6836832	.	+	.	ID=FBgn0034902.2.mrna1;geneID=FBgn0034902.2.path1;Name=FBgn0034902.2;Dir=sensecoverage=100.0;identity=99.7;matches=362;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014418
Chr2	stalkie_big_nohaplotig	exon	6836418	6836517	100	+	.	Parent=FBgn0034902.2.mrna1;Target=FBgn0034902.2 1 100 +
Chr2	stalkie_big_nohaplotig	exon	6836570	6836832	99	+	.	Parent=FBgn0034902.2.mrna1;Target=FBgn0034902.2 101 363 +
Chr2	stalkie_big_nohaplotig	CDS	6836418	6836517	.	+	0	Parent=FBgn0034902.2.mrna1;Target=FBgn0034902.2 1 100 +
Chr2	stalkie_big_nohaplotig	CDS	6836570	6836832	.	+	2	Parent=FBgn0034902.2.mrna1;Target=FBgn0034902.2 101 363 +
Chr2	gffcl	locus	6840427	6841774	.	-	.	ID=RLOC_00014419;geneIDs=comp155458_c0_seq1.path1;transcripts=comp155458_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6840427	6841774	.	-	.	ID=comp155458_c0_seq1.mrna1;geneID=comp155458_c0_seq1.path1;Name=comp155458_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1347;mismatches=1;indels=8;unknowns=0;Target=comp155458_c0_seq1 1356 1 .;CDS_Target=comp155458_c0_seq1 780 652 .;locus=RLOC_00014419
Chr2	stalkie_big_nohaplotig	exon	6840427	6841774	99	-	.	Parent=comp155458_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	6841001	6841128	.	-	0	Parent=comp155458_c0_seq1.mrna1
Chr2	gffcl	locus	6841807	6843098	.	-	.	ID=RLOC_00014420;geneIDs=comp144066_c0_seq1.path2;transcripts=comp144066_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	6841807	6843098	.	-	.	ID=comp144066_c0_seq1.mrna2;geneID=comp144066_c0_seq1.path2;Name=comp144066_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1285;mismatches=4;indels=5;unknowns=0;Target=comp144066_c0_seq1 1291 1 .;CDS_Target=comp144066_c0_seq1 341 3 .;locus=RLOC_00014420
Chr2	stalkie_big_nohaplotig	exon	6841807	6843098	99	-	.	Parent=comp144066_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	6842755	6843096	.	-	0	Parent=comp144066_c0_seq1.mrna2
Chr2	gffcl	locus	6847665	6925648	.	-	.	ID=RLOC_00014421;geneIDs=FBgn0034903.path1,FBgn0039537.1.path2;transcripts=FBgn0034903.mrna1,FBgn0039537.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	6847665	6925648	.	-	.	ID=FBgn0034903.mrna1;geneID=FBgn0034903.path1;Name=FBgn0034903;Dir=sensecoverage=55.7;identity=99.5;matches=828;mismatches=4;indels=0;unknowns=0;locus=RLOC_00014421
Chr2	stalkie_big_nohaplotig	exon	6847665	6847737	100	-	.	Parent=FBgn0034903.mrna1;Target=FBgn0034903 1422 1494 +
Chr2	stalkie_big_nohaplotig	exon	6851495	6851637	100	-	.	Parent=FBgn0034903.mrna1;Target=FBgn0034903 1279 1421 +
Chr2	stalkie_big_nohaplotig	exon	6867127	6867231	100	-	.	Parent=FBgn0034903.mrna1;Target=FBgn0034903 1174 1278 +
Chr2	stalkie_big_nohaplotig	exon	6867767	6868020	100	-	.	Parent=FBgn0034903.mrna1;Target=FBgn0034903 920 1173 +
Chr2	stalkie_big_nohaplotig	exon	6869809	6869935	99	-	.	Parent=FBgn0034903.mrna1;Target=FBgn0034903 793 919 +
Chr2	stalkie_big_nohaplotig	exon	6902246	6902349	100	-	.	Parent=FBgn0034903.mrna1;Target=FBgn0034903 689 792 +
Chr2	stalkie_big_nohaplotig	exon	6907808	6907810	100	-	.	Parent=FBgn0034903.mrna1;Target=FBgn0034903 686 688 +
Chr2	stalkie_big_nohaplotig	exon	6910521	6910535	80	-	.	Parent=FBgn0034903.mrna1;Target=FBgn0034903 671 685 +
Chr2	stalkie_big_nohaplotig	exon	6925641	6925648	100	-	.	Parent=FBgn0034903.mrna1;Target=FBgn0034903 663 670 +
Chr2	stalkie_big_nohaplotig	CDS	6847665	6847737	.	-	1	Parent=FBgn0034903.mrna1;Target=FBgn0034903 1422 1494 +
Chr2	stalkie_big_nohaplotig	CDS	6851495	6851637	.	-	0	Parent=FBgn0034903.mrna1;Target=FBgn0034903 1279 1421 +
Chr2	stalkie_big_nohaplotig	CDS	6867127	6867231	.	-	0	Parent=FBgn0034903.mrna1;Target=FBgn0034903 1174 1278 +
Chr2	stalkie_big_nohaplotig	CDS	6867767	6868020	.	-	2	Parent=FBgn0034903.mrna1;Target=FBgn0034903 920 1173 +
Chr2	stalkie_big_nohaplotig	CDS	6869809	6869935	.	-	0	Parent=FBgn0034903.mrna1;Target=FBgn0034903 793 919 +
Chr2	stalkie_big_nohaplotig	CDS	6902246	6902349	.	-	2	Parent=FBgn0034903.mrna1;Target=FBgn0034903 689 792 +
Chr2	stalkie_big_nohaplotig	CDS	6907808	6907810	.	-	2	Parent=FBgn0034903.mrna1;Target=FBgn0034903 686 688 +
Chr2	stalkie_big_nohaplotig	CDS	6910521	6910535	.	-	2	Parent=FBgn0034903.mrna1;Target=FBgn0034903 671 685 +
Chr2	stalkie_big_nohaplotig	CDS	6925641	6925647	.	-	0	Parent=FBgn0034903.mrna1;Target=FBgn0034903 664 670 +
Chr2	stalkie_big_nohaplotig	mRNA	6910210	6911505	.	-	.	ID=FBgn0039537.1.mrna2;geneID=FBgn0039537.1.path2;Name=FBgn0039537.1;Dir=sensecoverage=100.0;identity=99.3;matches=1230;mismatches=9;indels=0;unknowns=0;locus=RLOC_00014421
Chr2	stalkie_big_nohaplotig	exon	6910210	6911255	99	-	.	Parent=FBgn0039537.1.mrna2;Target=FBgn0039537.1 194 1239 +
Chr2	stalkie_big_nohaplotig	exon	6911313	6911505	98	-	.	Parent=FBgn0039537.1.mrna2;Target=FBgn0039537.1 1 193 +
Chr2	stalkie_big_nohaplotig	CDS	6910210	6911255	.	-	2	Parent=FBgn0039537.1.mrna2;Target=FBgn0039537.1 194 1239 +
Chr2	stalkie_big_nohaplotig	CDS	6911313	6911505	.	-	0	Parent=FBgn0039537.1.mrna2;Target=FBgn0039537.1 1 193 +
Chr2	gffcl	locus	6847735	6856079	.	+	.	ID=RLOC_00014422;geneIDs=comp149478_c0_seq1.path1;transcripts=comp149478_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6847735	6856079	.	+	.	ID=comp149478_c0_seq1.mrna1;geneID=comp149478_c0_seq1.path1;Name=comp149478_c0_seq1;Dir=sensecoverage=100.0;identity=99.0;matches=849;mismatches=9;indels=0;unknowns=0;locus=RLOC_00014422
Chr2	stalkie_big_nohaplotig	exon	6847735	6847758	100	+	.	Parent=comp149478_c0_seq1.mrna1;Target=comp149478_c0_seq1 1 24 +
Chr2	stalkie_big_nohaplotig	exon	6854337	6854458	100	+	.	Parent=comp149478_c0_seq1.mrna1;Target=comp149478_c0_seq1 25 146 +
Chr2	stalkie_big_nohaplotig	exon	6855227	6855323	97	+	.	Parent=comp149478_c0_seq1.mrna1;Target=comp149478_c0_seq1 147 243 +
Chr2	stalkie_big_nohaplotig	exon	6855401	6855625	99	+	.	Parent=comp149478_c0_seq1.mrna1;Target=comp149478_c0_seq1 244 468 +
Chr2	stalkie_big_nohaplotig	exon	6855690	6856079	98	+	.	Parent=comp149478_c0_seq1.mrna1;Target=comp149478_c0_seq1 469 858 +
Chr2	stalkie_big_nohaplotig	CDS	6854337	6854458	.	+	0	Parent=comp149478_c0_seq1.mrna1;Target=comp149478_c0_seq1 25 146 +
Chr2	stalkie_big_nohaplotig	CDS	6855227	6855323	.	+	1	Parent=comp149478_c0_seq1.mrna1;Target=comp149478_c0_seq1 147 243 +
Chr2	stalkie_big_nohaplotig	CDS	6855401	6855625	.	+	0	Parent=comp149478_c0_seq1.mrna1;Target=comp149478_c0_seq1 244 468 +
Chr2	stalkie_big_nohaplotig	CDS	6855690	6855887	.	+	0	Parent=comp149478_c0_seq1.mrna1;Target=comp149478_c0_seq1 469 666 +
Chr2	gffcl	locus	6908019	6908927	.	+	.	ID=RLOC_00014423;geneIDs=FBgn0034913.1.path2;transcripts=FBgn0034913.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	6908019	6908927	.	+	.	ID=FBgn0034913.1.mrna2;geneID=FBgn0034913.1.path2;Name=FBgn0034913.1;Dir=sensecoverage=100.0;identity=100.0;matches=840;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014423
Chr2	stalkie_big_nohaplotig	exon	6908019	6908265	100	+	.	Parent=FBgn0034913.1.mrna2;Target=FBgn0034913.1 1 247 +
Chr2	stalkie_big_nohaplotig	exon	6908335	6908927	100	+	.	Parent=FBgn0034913.1.mrna2;Target=FBgn0034913.1 248 840 +
Chr2	stalkie_big_nohaplotig	CDS	6908019	6908265	.	+	0	Parent=FBgn0034913.1.mrna2;Target=FBgn0034913.1 1 247 +
Chr2	stalkie_big_nohaplotig	CDS	6908335	6908927	.	+	2	Parent=FBgn0034913.1.mrna2;Target=FBgn0034913.1 248 840 +
Chr2	gffcl	locus	6913836	6915415	.	+	.	ID=RLOC_00014424;geneIDs=FBgn0003401.1.path1;transcripts=FBgn0003401.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6913836	6915415	.	+	.	ID=FBgn0003401.1.mrna1;geneID=FBgn0003401.1.path1;Name=FBgn0003401.1;Dir=sensecoverage=100.0;identity=99.9;matches=1360;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014424
Chr2	stalkie_big_nohaplotig	exon	6913836	6913933	100	+	.	Parent=FBgn0003401.1.mrna1;Target=FBgn0003401.1 1 98 +
Chr2	stalkie_big_nohaplotig	exon	6914094	6914986	99	+	.	Parent=FBgn0003401.1.mrna1;Target=FBgn0003401.1 99 991 +
Chr2	stalkie_big_nohaplotig	exon	6915045	6915415	100	+	.	Parent=FBgn0003401.1.mrna1;Target=FBgn0003401.1 992 1362 +
Chr2	stalkie_big_nohaplotig	CDS	6913836	6913933	.	+	0	Parent=FBgn0003401.1.mrna1;Target=FBgn0003401.1 1 98 +
Chr2	stalkie_big_nohaplotig	CDS	6914094	6914986	.	+	1	Parent=FBgn0003401.1.mrna1;Target=FBgn0003401.1 99 991 +
Chr2	stalkie_big_nohaplotig	CDS	6915045	6915415	.	+	2	Parent=FBgn0003401.1.mrna1;Target=FBgn0003401.1 992 1362 +
Chr2	gffcl	locus	6917125	6918041	.	+	.	ID=RLOC_00014425;geneIDs=comp50375_c0_seq1.path1;transcripts=comp50375_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6917125	6918041	.	+	.	ID=comp50375_c0_seq1.mrna1;geneID=comp50375_c0_seq1.path1;Name=comp50375_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=911;mismatches=6;indels=0;unknowns=0;Target=comp50375_c0_seq1 917 1 .;CDS_Target=comp50375_c0_seq1 123 1 .;locus=RLOC_00014425
Chr2	stalkie_big_nohaplotig	exon	6917125	6918041	99	+	.	Parent=comp50375_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	6917125	6917247	.	+	0	Parent=comp50375_c0_seq1.mrna1
Chr2	gffcl	locus	6918280	6919272	.	-	.	ID=RLOC_00014426;geneIDs=comp156361_c0_seq1.path2;transcripts=comp156361_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	6918280	6919272	.	-	.	ID=comp156361_c0_seq1.mrna2;geneID=comp156361_c0_seq1.path2;Name=comp156361_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=988;mismatches=5;indels=1;unknowns=0;Target=comp156361_c0_seq1 994 1 .;CDS_Target=comp156361_c0_seq1 351 154 .;locus=RLOC_00014426
Chr2	stalkie_big_nohaplotig	exon	6918280	6919272	99	-	.	Parent=comp156361_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	6918922	6919119	.	-	0	Parent=comp156361_c0_seq1.mrna2
Chr2	gffcl	locus	6921784	6929722	.	+	.	ID=RLOC_00014427;geneIDs=comp154183_c0_seq1.path1;transcripts=comp154183_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6921784	6929722	.	+	.	ID=comp154183_c0_seq1.mrna1;geneID=comp154183_c0_seq1.path1;Name=comp154183_c0_seq1;Dir=indeterminatecoverage=64.2;identity=93.7;matches=430;mismatches=18;indels=11;unknowns=0;Target=comp154183_c0_seq1 136 2 .;locus=RLOC_00014427
Chr2	stalkie_big_nohaplotig	exon	6921784	6922238	93	+	.	Parent=comp154183_c0_seq1.mrna1;Target=comp154183_c0_seq1 444 1 .
Chr2	stalkie_big_nohaplotig	exon	6929719	6929722	100	+	.	Parent=comp154183_c0_seq1.mrna1;Target=comp154183_c0_seq1 451 448 .
Chr2	stalkie_big_nohaplotig	CDS	6921785	6921930	.	+	0	Parent=comp154183_c0_seq1.mrna1
Chr2	gffcl	locus	6971990	6972470	.	+	.	ID=RLOC_00014428;geneIDs=comp149915_c0_seq1.path1;transcripts=comp149915_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6971990	6972470	.	+	.	ID=comp149915_c0_seq1.mrna1;geneID=comp149915_c0_seq1.path1;Name=comp149915_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=475;mismatches=6;indels=0;unknowns=0;Target=comp149915_c0_seq1 481 1 .;CDS_Target=comp149915_c0_seq1 182 33 .;locus=RLOC_00014428
Chr2	stalkie_big_nohaplotig	exon	6971990	6972470	98	+	.	Parent=comp149915_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	6972022	6972171	.	+	0	Parent=comp149915_c0_seq1.mrna1
Chr2	gffcl	locus	6987070	6994533	.	+	.	ID=RLOC_00014429;geneIDs=FBgn0034909.1.path1;transcripts=FBgn0034909.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6987070	6994533	.	+	.	ID=FBgn0034909.1.mrna1;geneID=FBgn0034909.1.path1;Name=FBgn0034909.1;Dir=sensecoverage=97.6;identity=99.6;matches=1563;mismatches=7;indels=0;unknowns=0;locus=RLOC_00014429
Chr2	stalkie_big_nohaplotig	exon	6987070	6987217	100	+	.	Parent=FBgn0034909.1.mrna1;Target=FBgn0034909.1 39 186 +
Chr2	stalkie_big_nohaplotig	exon	6990013	6990163	100	+	.	Parent=FBgn0034909.1.mrna1;Target=FBgn0034909.1 187 337 +
Chr2	stalkie_big_nohaplotig	exon	6990232	6990440	99	+	.	Parent=FBgn0034909.1.mrna1;Target=FBgn0034909.1 338 546 +
Chr2	stalkie_big_nohaplotig	exon	6993472	6994533	99	+	.	Parent=FBgn0034909.1.mrna1;Target=FBgn0034909.1 547 1608 +
Chr2	stalkie_big_nohaplotig	CDS	6987071	6987217	.	+	0	Parent=FBgn0034909.1.mrna1;Target=FBgn0034909.1 40 186 +
Chr2	stalkie_big_nohaplotig	CDS	6990013	6990163	.	+	0	Parent=FBgn0034909.1.mrna1;Target=FBgn0034909.1 187 337 +
Chr2	stalkie_big_nohaplotig	CDS	6990232	6990440	.	+	2	Parent=FBgn0034909.1.mrna1;Target=FBgn0034909.1 338 546 +
Chr2	stalkie_big_nohaplotig	CDS	6993472	6994533	.	+	0	Parent=FBgn0034909.1.mrna1;Target=FBgn0034909.1 547 1608 +
Chr2	gffcl	locus	6997529	7001712	.	+	.	ID=RLOC_00014430;geneIDs=FBgn0032176.1.path1;transcripts=FBgn0032176.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	6997529	7001712	.	+	.	ID=FBgn0032176.1.mrna1;geneID=FBgn0032176.1.path1;Name=FBgn0032176.1;Dir=sensecoverage=100.0;identity=99.8;matches=3425;mismatches=7;indels=0;unknowns=0;locus=RLOC_00014430
Chr2	stalkie_big_nohaplotig	exon	6997529	6998620	99	+	.	Parent=FBgn0032176.1.mrna1;Target=FBgn0032176.1 1 1092 +
Chr2	stalkie_big_nohaplotig	exon	6999160	7001262	99	+	.	Parent=FBgn0032176.1.mrna1;Target=FBgn0032176.1 1093 3195 +
Chr2	stalkie_big_nohaplotig	exon	7001476	7001712	99	+	.	Parent=FBgn0032176.1.mrna1;Target=FBgn0032176.1 3196 3432 +
Chr2	stalkie_big_nohaplotig	CDS	6997529	6998620	.	+	0	Parent=FBgn0032176.1.mrna1;Target=FBgn0032176.1 1 1092 +
Chr2	stalkie_big_nohaplotig	CDS	6999160	7001262	.	+	0	Parent=FBgn0032176.1.mrna1;Target=FBgn0032176.1 1093 3195 +
Chr2	stalkie_big_nohaplotig	CDS	7001476	7001712	.	+	0	Parent=FBgn0032176.1.mrna1;Target=FBgn0032176.1 3196 3432 +
Chr2	gffcl	locus	7003634	7005714	.	+	.	ID=RLOC_00014431;geneIDs=FBgn0034908.1.path1;transcripts=FBgn0034908.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7003634	7005714	.	+	.	ID=FBgn0034908.1.mrna1;geneID=FBgn0034908.1.path1;Name=FBgn0034908.1;Dir=sensecoverage=100.0;identity=99.4;matches=1951;mismatches=11;indels=0;unknowns=0;locus=RLOC_00014431
Chr2	stalkie_big_nohaplotig	exon	7003634	7003921	98	+	.	Parent=FBgn0034908.1.mrna1;Target=FBgn0034908.1 1 288 +
Chr2	stalkie_big_nohaplotig	exon	7003984	7004872	99	+	.	Parent=FBgn0034908.1.mrna1;Target=FBgn0034908.1 289 1177 +
Chr2	stalkie_big_nohaplotig	exon	7004930	7005714	99	+	.	Parent=FBgn0034908.1.mrna1;Target=FBgn0034908.1 1178 1962 +
Chr2	stalkie_big_nohaplotig	CDS	7003634	7003921	.	+	0	Parent=FBgn0034908.1.mrna1;Target=FBgn0034908.1 1 288 +
Chr2	stalkie_big_nohaplotig	CDS	7003984	7004872	.	+	0	Parent=FBgn0034908.1.mrna1;Target=FBgn0034908.1 289 1177 +
Chr2	stalkie_big_nohaplotig	CDS	7004930	7005714	.	+	2	Parent=FBgn0034908.1.mrna1;Target=FBgn0034908.1 1178 1962 +
Chr2	gffcl	locus	7007927	7008595	.	+	.	ID=RLOC_00014432;geneIDs=FBgn0028411.1.path1;transcripts=FBgn0028411.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7007927	7008595	.	+	.	ID=FBgn0028411.1.mrna1;geneID=FBgn0028411.1.path1;Name=FBgn0028411.1;Dir=sensecoverage=100.0;identity=99.8;matches=440;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014432
Chr2	stalkie_big_nohaplotig	exon	7007927	7007965	100	+	.	Parent=FBgn0028411.1.mrna1;Target=FBgn0028411.1 1 39 +
Chr2	stalkie_big_nohaplotig	exon	7008025	7008111	98	+	.	Parent=FBgn0028411.1.mrna1;Target=FBgn0028411.1 40 126 +
Chr2	stalkie_big_nohaplotig	exon	7008281	7008595	100	+	.	Parent=FBgn0028411.1.mrna1;Target=FBgn0028411.1 127 441 +
Chr2	stalkie_big_nohaplotig	CDS	7007927	7007965	.	+	0	Parent=FBgn0028411.1.mrna1;Target=FBgn0028411.1 1 39 +
Chr2	stalkie_big_nohaplotig	CDS	7008025	7008111	.	+	0	Parent=FBgn0028411.1.mrna1;Target=FBgn0028411.1 40 126 +
Chr2	stalkie_big_nohaplotig	CDS	7008281	7008595	.	+	0	Parent=FBgn0028411.1.mrna1;Target=FBgn0028411.1 127 441 +
Chr2	gffcl	locus	7009573	7009928	.	-	.	ID=RLOC_00014433;geneIDs=comp65418_c0_seq1.path1;transcripts=comp65418_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7009573	7009928	.	-	.	ID=comp65418_c0_seq1.mrna1;geneID=comp65418_c0_seq1.path1;Name=comp65418_c0_seq1;Dir=indeterminatecoverage=97.3;identity=100.0;matches=356;mismatches=0;indels=0;unknowns=0;Target=comp65418_c0_seq1 366 11 .;CDS_Target=comp65418_c0_seq1 53 12 .;locus=RLOC_00014433
Chr2	stalkie_big_nohaplotig	exon	7009573	7009928	100	-	.	Parent=comp65418_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7009886	7009927	.	-	0	Parent=comp65418_c0_seq1.mrna1
Chr2	gffcl	locus	7011617	7014179	.	+	.	ID=RLOC_00014434;geneIDs=FBgn0010278.1.path1;transcripts=FBgn0010278.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7011617	7014179	.	+	.	ID=FBgn0010278.1.mrna1;geneID=FBgn0010278.1.path1;Name=FBgn0010278.1;Dir=sensecoverage=100.0;identity=99.0;matches=2188;mismatches=11;indels=12;unknowns=0;locus=RLOC_00014434
Chr2	stalkie_big_nohaplotig	exon	7011617	7011685	100	+	.	Parent=FBgn0010278.1.mrna1;Target=FBgn0010278.1 1 69 +
Chr2	stalkie_big_nohaplotig	exon	7011749	7012695	99	+	.	Parent=FBgn0010278.1.mrna1;Target=FBgn0010278.1 70 1016 +
Chr2	stalkie_big_nohaplotig	exon	7012756	7013386	97	+	.	Parent=FBgn0010278.1.mrna1;Target=FBgn0010278.1 1017 1635 +
Chr2	stalkie_big_nohaplotig	exon	7013449	7013841	99	+	.	Parent=FBgn0010278.1.mrna1;Target=FBgn0010278.1 1636 2028 +
Chr2	stalkie_big_nohaplotig	exon	7013911	7013955	100	+	.	Parent=FBgn0010278.1.mrna1;Target=FBgn0010278.1 2029 2073 +
Chr2	stalkie_big_nohaplotig	exon	7014054	7014179	100	+	.	Parent=FBgn0010278.1.mrna1;Target=FBgn0010278.1 2074 2199 +
Chr2	stalkie_big_nohaplotig	CDS	7011617	7011685	.	+	0	Parent=FBgn0010278.1.mrna1;Target=FBgn0010278.1 1 69 +
Chr2	stalkie_big_nohaplotig	CDS	7011749	7012695	.	+	0	Parent=FBgn0010278.1.mrna1;Target=FBgn0010278.1 70 1016 +
Chr2	stalkie_big_nohaplotig	CDS	7012756	7013386	.	+	1	Parent=FBgn0010278.1.mrna1;Target=FBgn0010278.1 1017 1635 +
Chr2	stalkie_big_nohaplotig	CDS	7013449	7013841	.	+	0	Parent=FBgn0010278.1.mrna1;Target=FBgn0010278.1 1636 2028 +
Chr2	stalkie_big_nohaplotig	CDS	7013911	7013955	.	+	0	Parent=FBgn0010278.1.mrna1;Target=FBgn0010278.1 2029 2073 +
Chr2	stalkie_big_nohaplotig	CDS	7014054	7014179	.	+	0	Parent=FBgn0010278.1.mrna1;Target=FBgn0010278.1 2074 2199 +
Chr2	gffcl	locus	7020675	7023077	.	-	.	ID=RLOC_00014435;geneIDs=FBgn0033029.1.path1;transcripts=FBgn0033029.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7020675	7023077	.	-	.	ID=FBgn0033029.1.mrna1;geneID=FBgn0033029.1.path1;Name=FBgn0033029.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=2388;mismatches=15;indels=0;unknowns=0;Target=FBgn0033029.1 2403 1 .;locus=RLOC_00014435
Chr2	stalkie_big_nohaplotig	exon	7020675	7023077	99	-	.	Parent=FBgn0033029.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7020675	7023077	.	-	0	Parent=FBgn0033029.1.mrna1
Chr2	gffcl	locus	7039653	7039961	.	+	.	ID=RLOC_00014436;geneIDs=comp140377_c1_seq1.path1;transcripts=comp140377_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7039653	7039961	.	+	.	ID=comp140377_c1_seq1.mrna1;geneID=comp140377_c1_seq1.path1;Name=comp140377_c1_seq1;Dir=indeterminatecoverage=94.8;identity=99.4;matches=307;mismatches=0;indels=2;unknowns=0;Target=comp140377_c1_seq1 307 1 .;CDS_Target=comp140377_c1_seq1 53 3 .;locus=RLOC_00014436
Chr2	stalkie_big_nohaplotig	exon	7039653	7039961	99	+	.	Parent=comp140377_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7039655	7039705	.	+	0	Parent=comp140377_c1_seq1.mrna1
Chr2	gffcl	locus	7039984	7040270	.	+	.	ID=RLOC_00014437;geneIDs=comp46305_c0_seq1.path1;transcripts=comp46305_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7039984	7040270	.	+	.	ID=comp46305_c0_seq1.mrna1;geneID=comp46305_c0_seq1.path1;Name=comp46305_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=287;mismatches=0;indels=0;unknowns=0;Target=comp46305_c0_seq1 287 1 .;CDS_Target=comp46305_c0_seq1 62 3 .;locus=RLOC_00014437
Chr2	stalkie_big_nohaplotig	exon	7039984	7040270	100	+	.	Parent=comp46305_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7039986	7040045	.	+	0	Parent=comp46305_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7056467	7150638	.	+	.	ID=comp152144_c0_seq1.mrna1;geneID=comp152144_c0_seq1.path1;Name=comp152144_c0_seq1;Dir=antisensecoverage=88.4;identity=97.2;matches=2118;mismatches=25;indels=35;unknowns=0;locus=RLOC_00014438
Chr2	stalkie_big_nohaplotig	exon	7056467	7056474	100	+	.	Parent=comp152144_c0_seq1.mrna1;Target=comp152144_c0_seq1 2170 2177 -
Chr2	stalkie_big_nohaplotig	exon	7056927	7056934	100	+	.	Parent=comp152144_c0_seq1.mrna1;Target=comp152144_c0_seq1 2162 2169 -
Chr2	stalkie_big_nohaplotig	exon	7060077	7060081	100	+	.	Parent=comp152144_c0_seq1.mrna1;Target=comp152144_c0_seq1 2157 2161 -
Chr2	stalkie_big_nohaplotig	exon	7066802	7066803	100	+	.	Parent=comp152144_c0_seq1.mrna1;Target=comp152144_c0_seq1 2155 2156 -
Chr2	stalkie_big_nohaplotig	exon	7068786	7068797	100	+	.	Parent=comp152144_c0_seq1.mrna1;Target=comp152144_c0_seq1 2143 2154 -
Chr2	stalkie_big_nohaplotig	exon	7091968	7091971	75	+	.	Parent=comp152144_c0_seq1.mrna1;Target=comp152144_c0_seq1 2139 2142 -
Chr2	stalkie_big_nohaplotig	exon	7092141	7092145	100	+	.	Parent=comp152144_c0_seq1.mrna1;Target=comp152144_c0_seq1 2134 2138 -
Chr2	stalkie_big_nohaplotig	exon	7093826	7093835	100	+	.	Parent=comp152144_c0_seq1.mrna1;Target=comp152144_c0_seq1 2124 2133 -
Chr2	stalkie_big_nohaplotig	exon	7099866	7099871	100	+	.	Parent=comp152144_c0_seq1.mrna1;Target=comp152144_c0_seq1 2118 2123 -
Chr2	stalkie_big_nohaplotig	exon	7105938	7105944	100	+	.	Parent=comp152144_c0_seq1.mrna1;Target=comp152144_c0_seq1 2111 2117 -
Chr2	stalkie_big_nohaplotig	exon	7110999	7111002	100	+	.	Parent=comp152144_c0_seq1.mrna1;Target=comp152144_c0_seq1 2107 2110 -
Chr2	stalkie_big_nohaplotig	exon	7119098	7119100	100	+	.	Parent=comp152144_c0_seq1.mrna1;Target=comp152144_c0_seq1 2104 2106 -
Chr2	stalkie_big_nohaplotig	exon	7126893	7126901	88	+	.	Parent=comp152144_c0_seq1.mrna1;Target=comp152144_c0_seq1 2095 2103 -
Chr2	stalkie_big_nohaplotig	exon	7134744	7134753	80	+	.	Parent=comp152144_c0_seq1.mrna1;Target=comp152144_c0_seq1 2085 2094 -
Chr2	stalkie_big_nohaplotig	exon	7140830	7140832	100	+	.	Parent=comp152144_c0_seq1.mrna1;Target=comp152144_c0_seq1 2082 2084 -
Chr2	stalkie_big_nohaplotig	exon	7143095	7143101	100	+	.	Parent=comp152144_c0_seq1.mrna1;Target=comp152144_c0_seq1 2075 2081 -
Chr2	stalkie_big_nohaplotig	exon	7148547	7149724	95	+	.	Parent=comp152144_c0_seq1.mrna1;Target=comp152144_c0_seq1 864 2074 -
Chr2	stalkie_big_nohaplotig	exon	7149776	7150638	100	+	.	Parent=comp152144_c0_seq1.mrna1;Target=comp152144_c0_seq1 1 863 -
Chr2	stalkie_big_nohaplotig	CDS	7149229	7149724	.	+	0	Parent=comp152144_c0_seq1.mrna1;Target=comp152144_c0_seq1 864 1359 .
Chr2	stalkie_big_nohaplotig	CDS	7149776	7149789	.	+	2	Parent=comp152144_c0_seq1.mrna1;Target=comp152144_c0_seq1 850 863 .
Chr2	stalkie_big_nohaplotig	mRNA	7139546	7140371	.	-	.	ID=comp143095_c0_seq1.mrna1;geneID=comp143095_c0_seq1.path1;Name=comp143095_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=826;mismatches=0;indels=4;unknowns=0;Target=comp143095_c0_seq1 830 1 .;CDS_Target=comp143095_c0_seq1 314 180 .;locus=RLOC_00014438
Chr2	stalkie_big_nohaplotig	exon	7139546	7140371	99	-	.	Parent=comp143095_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7140058	7140192	.	-	0	Parent=comp143095_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7140787	7141131	.	-	.	ID=comp115940_c0_seq1.mrna1;geneID=comp115940_c0_seq1.path1;Name=comp115940_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=341;mismatches=4;indels=0;unknowns=0;Target=comp115940_c0_seq1 345 1 .;CDS_Target=comp115940_c0_seq1 234 1 .;locus=RLOC_00014438
Chr2	stalkie_big_nohaplotig	exon	7140787	7141131	98	-	.	Parent=comp115940_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7140898	7141131	.	-	0	Parent=comp115940_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7149226	7150513	.	+	.	ID=ORF1242.mrna1;geneID=ORF1242.path1;Name=ORF1242;Dir=sensecoverage=100.0;identity=99.7;matches=1163;mismatches=4;indels=0;unknowns=0;locus=RLOC_00014438
Chr2	stalkie_big_nohaplotig	exon	7149226	7149724	99	+	.	Parent=ORF1242.mrna1;Target=ORF1242 1 499 +
Chr2	stalkie_big_nohaplotig	exon	7149790	7150052	100	+	.	Parent=ORF1242.mrna1;Target=ORF1242 500 762 +
Chr2	stalkie_big_nohaplotig	exon	7150109	7150513	100	+	.	Parent=ORF1242.mrna1;Target=ORF1242 763 1167 +
Chr2	stalkie_big_nohaplotig	CDS	7149226	7149724	.	+	0	Parent=ORF1242.mrna1;Target=ORF1242 1 499 +
Chr2	stalkie_big_nohaplotig	CDS	7149790	7150052	.	+	2	Parent=ORF1242.mrna1;Target=ORF1242 500 762 +
Chr2	stalkie_big_nohaplotig	CDS	7150109	7150513	.	+	0	Parent=ORF1242.mrna1;Target=ORF1242 763 1167 +
Chr2	gffcl	locus	7070579	7073398	.	+	.	ID=RLOC_00014440;geneIDs=FBgn0033890.1.path1;transcripts=FBgn0033890.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7070579	7073398	.	+	.	ID=FBgn0033890.1.mrna1;geneID=FBgn0033890.1.path1;Name=FBgn0033890.1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=2794;mismatches=26;indels=6;unknowns=0;Target=FBgn0033890.1 2826 1 .;locus=RLOC_00014440
Chr2	stalkie_big_nohaplotig	exon	7070579	7073398	98	+	.	Parent=FBgn0033890.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7070579	7073398	.	+	0	Parent=FBgn0033890.1.mrna1
Chr2	gffcl	locus	7075809	7076988	.	+	.	ID=RLOC_00014441;geneIDs=FBgn0033891.1.path1;transcripts=FBgn0033891.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7075809	7076988	.	+	.	ID=FBgn0033891.1.mrna1;geneID=FBgn0033891.1.path1;Name=FBgn0033891.1;Dir=sensecoverage=100.0;identity=99.6;matches=929;mismatches=3;indels=1;unknowns=0;locus=RLOC_00014441
Chr2	stalkie_big_nohaplotig	exon	7075809	7075860	98	+	.	Parent=FBgn0033891.1.mrna1;Target=FBgn0033891.1 1 53 +
Chr2	stalkie_big_nohaplotig	exon	7075918	7076173	99	+	.	Parent=FBgn0033891.1.mrna1;Target=FBgn0033891.1 54 309 +
Chr2	stalkie_big_nohaplotig	exon	7076243	7076467	100	+	.	Parent=FBgn0033891.1.mrna1;Target=FBgn0033891.1 310 534 +
Chr2	stalkie_big_nohaplotig	exon	7076528	7076740	100	+	.	Parent=FBgn0033891.1.mrna1;Target=FBgn0033891.1 535 747 +
Chr2	stalkie_big_nohaplotig	exon	7076803	7076988	99	+	.	Parent=FBgn0033891.1.mrna1;Target=FBgn0033891.1 748 933 +
Chr2	stalkie_big_nohaplotig	CDS	7075811	7075860	.	+	0	Parent=FBgn0033891.1.mrna1;Target=FBgn0033891.1 3 53 +
Chr2	stalkie_big_nohaplotig	CDS	7075918	7075938	.	+	1	Parent=FBgn0033891.1.mrna1;Target=FBgn0033891.1 54 74 +
Chr2	gffcl	locus	7079754	7080369	.	+	.	ID=RLOC_00014442;geneIDs=comp153544_c1_seq1.path1;transcripts=comp153544_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7079754	7080369	.	+	.	ID=comp153544_c1_seq1.mrna1;geneID=comp153544_c1_seq1.path1;Name=comp153544_c1_seq1;Dir=indeterminatecoverage=93.1;identity=98.5;matches=610;mismatches=6;indels=3;unknowns=0;Target=comp153544_c1_seq1 623 5 .;CDS_Target=comp153544_c1_seq1 88 5 .;locus=RLOC_00014442
Chr2	stalkie_big_nohaplotig	exon	7079754	7080369	98	+	.	Parent=comp153544_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7079754	7079837	.	+	0	Parent=comp153544_c1_seq1.mrna1
Chr2	gffcl	locus	7081522	7098875	.	-	.	ID=RLOC_00014443;geneIDs=FBgn0020620.1.path1;transcripts=FBgn0020620.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7081522	7098875	.	-	.	ID=FBgn0020620.1.mrna1;geneID=FBgn0020620.1.path1;Name=FBgn0020620.1;Dir=sensecoverage=100.0;identity=99.9;matches=1553;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014443
Chr2	stalkie_big_nohaplotig	exon	7081522	7081585	100	-	.	Parent=FBgn0020620.1.mrna1;Target=FBgn0020620.1 1491 1554 +
Chr2	stalkie_big_nohaplotig	exon	7081652	7081760	100	-	.	Parent=FBgn0020620.1.mrna1;Target=FBgn0020620.1 1382 1490 +
Chr2	stalkie_big_nohaplotig	exon	7093032	7093096	100	-	.	Parent=FBgn0020620.1.mrna1;Target=FBgn0020620.1 1317 1381 +
Chr2	stalkie_big_nohaplotig	exon	7093180	7093565	100	-	.	Parent=FBgn0020620.1.mrna1;Target=FBgn0020620.1 931 1316 +
Chr2	stalkie_big_nohaplotig	exon	7093652	7094333	100	-	.	Parent=FBgn0020620.1.mrna1;Target=FBgn0020620.1 249 930 +
Chr2	stalkie_big_nohaplotig	exon	7098628	7098875	99	-	.	Parent=FBgn0020620.1.mrna1;Target=FBgn0020620.1 1 248 +
Chr2	stalkie_big_nohaplotig	CDS	7081522	7081585	.	-	1	Parent=FBgn0020620.1.mrna1;Target=FBgn0020620.1 1491 1554 +
Chr2	stalkie_big_nohaplotig	CDS	7081652	7081760	.	-	2	Parent=FBgn0020620.1.mrna1;Target=FBgn0020620.1 1382 1490 +
Chr2	stalkie_big_nohaplotig	CDS	7093032	7093096	.	-	1	Parent=FBgn0020620.1.mrna1;Target=FBgn0020620.1 1317 1381 +
Chr2	stalkie_big_nohaplotig	CDS	7093180	7093565	.	-	0	Parent=FBgn0020620.1.mrna1;Target=FBgn0020620.1 931 1316 +
Chr2	stalkie_big_nohaplotig	CDS	7093652	7094333	.	-	1	Parent=FBgn0020620.1.mrna1;Target=FBgn0020620.1 249 930 +
Chr2	stalkie_big_nohaplotig	CDS	7098628	7098875	.	-	0	Parent=FBgn0020620.1.mrna1;Target=FBgn0020620.1 1 248 +
Chr2	gffcl	locus	7084556	7086148	.	-	.	ID=RLOC_00014444;geneIDs=comp161468_c0_seq1.path1;transcripts=comp161468_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7084556	7086148	.	-	.	ID=comp161468_c0_seq1.mrna1;geneID=comp161468_c0_seq1.path1;Name=comp161468_c0_seq1;Dir=indeterminatecoverage=99.6;identity=95.2;matches=1542;mismatches=45;indels=32;unknowns=0;Target=comp161468_c0_seq1 1620 8 .;CDS_Target=comp161468_c0_seq1 1035 976 .;locus=RLOC_00014444
Chr2	stalkie_big_nohaplotig	exon	7084556	7086148	95	-	.	Parent=comp161468_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7085140	7085197	.	-	0	Parent=comp161468_c0_seq1.mrna1
Chr2	gffcl	locus	7100838	7104220	.	+	.	ID=RLOC_00014445;geneIDs=FBgn0261850.1.path1;transcripts=FBgn0261850.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7100838	7104220	.	+	.	ID=FBgn0261850.1.mrna1;geneID=FBgn0261850.1.path1;Name=FBgn0261850.1;Dir=sensecoverage=100.0;identity=99.4;matches=2305;mismatches=14;indels=0;unknowns=0;locus=RLOC_00014445
Chr2	stalkie_big_nohaplotig	exon	7100838	7100857	95	+	.	Parent=FBgn0261850.1.mrna1;Target=FBgn0261850.1 1 20 +
Chr2	stalkie_big_nohaplotig	exon	7100935	7101389	99	+	.	Parent=FBgn0261850.1.mrna1;Target=FBgn0261850.1 21 475 +
Chr2	stalkie_big_nohaplotig	exon	7101458	7101588	99	+	.	Parent=FBgn0261850.1.mrna1;Target=FBgn0261850.1 476 606 +
Chr2	stalkie_big_nohaplotig	exon	7101646	7101866	100	+	.	Parent=FBgn0261850.1.mrna1;Target=FBgn0261850.1 607 827 +
Chr2	stalkie_big_nohaplotig	exon	7101928	7102061	99	+	.	Parent=FBgn0261850.1.mrna1;Target=FBgn0261850.1 828 961 +
Chr2	stalkie_big_nohaplotig	exon	7102125	7102372	99	+	.	Parent=FBgn0261850.1.mrna1;Target=FBgn0261850.1 962 1209 +
Chr2	stalkie_big_nohaplotig	exon	7102982	7103263	100	+	.	Parent=FBgn0261850.1.mrna1;Target=FBgn0261850.1 1210 1491 +
Chr2	stalkie_big_nohaplotig	exon	7103330	7103608	99	+	.	Parent=FBgn0261850.1.mrna1;Target=FBgn0261850.1 1492 1770 +
Chr2	stalkie_big_nohaplotig	exon	7103672	7104220	99	+	.	Parent=FBgn0261850.1.mrna1;Target=FBgn0261850.1 1771 2319 +
Chr2	stalkie_big_nohaplotig	CDS	7100838	7100857	.	+	0	Parent=FBgn0261850.1.mrna1;Target=FBgn0261850.1 1 20 +
Chr2	stalkie_big_nohaplotig	CDS	7100935	7101389	.	+	1	Parent=FBgn0261850.1.mrna1;Target=FBgn0261850.1 21 475 +
Chr2	stalkie_big_nohaplotig	CDS	7101458	7101588	.	+	2	Parent=FBgn0261850.1.mrna1;Target=FBgn0261850.1 476 606 +
Chr2	stalkie_big_nohaplotig	CDS	7101646	7101866	.	+	0	Parent=FBgn0261850.1.mrna1;Target=FBgn0261850.1 607 827 +
Chr2	stalkie_big_nohaplotig	CDS	7101928	7102061	.	+	1	Parent=FBgn0261850.1.mrna1;Target=FBgn0261850.1 828 961 +
Chr2	stalkie_big_nohaplotig	CDS	7102125	7102372	.	+	2	Parent=FBgn0261850.1.mrna1;Target=FBgn0261850.1 962 1209 +
Chr2	stalkie_big_nohaplotig	CDS	7102982	7103263	.	+	0	Parent=FBgn0261850.1.mrna1;Target=FBgn0261850.1 1210 1491 +
Chr2	stalkie_big_nohaplotig	CDS	7103330	7103608	.	+	0	Parent=FBgn0261850.1.mrna1;Target=FBgn0261850.1 1492 1770 +
Chr2	stalkie_big_nohaplotig	CDS	7103672	7104220	.	+	0	Parent=FBgn0261850.1.mrna1;Target=FBgn0261850.1 1771 2319 +
Chr2	gffcl	locus	7107256	8594743	.	+	.	ID=RLOC_00014446;geneIDs=FBgn0003162.1.path1,comp160268_c0_seq1.path1;transcripts=comp160268_c0_seq1.mrna1,FBgn0003162.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7107256	8594743	.	+	.	ID=comp160268_c0_seq1.mrna1;geneID=comp160268_c0_seq1.path1;Name=comp160268_c0_seq1;Dir=sensecoverage=66.6;identity=96.2;matches=2721;mismatches=72;indels=35;unknowns=0;locus=RLOC_00014446
Chr2	stalkie_big_nohaplotig	exon	7107256	7108174	99	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 1 919 +
Chr2	stalkie_big_nohaplotig	exon	7122829	7123038	99	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 920 1129 +
Chr2	stalkie_big_nohaplotig	exon	7130198	7130363	100	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 1130 1295 +
Chr2	stalkie_big_nohaplotig	exon	7130440	7130556	100	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 1296 1412 +
Chr2	stalkie_big_nohaplotig	exon	7131551	7132631	99	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 1413 2492 +
Chr2	stalkie_big_nohaplotig	exon	8503292	8503298	100	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 2493 2499 +
Chr2	stalkie_big_nohaplotig	exon	8504880	8504890	100	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 2500 2510 +
Chr2	stalkie_big_nohaplotig	exon	8505737	8505750	85	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 2511 2522 +
Chr2	stalkie_big_nohaplotig	exon	8511890	8511903	92	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 2523 2536 +
Chr2	stalkie_big_nohaplotig	exon	8523367	8523368	100	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 2537 2538 +
Chr2	stalkie_big_nohaplotig	exon	8526283	8526285	100	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 2539 2541 +
Chr2	stalkie_big_nohaplotig	exon	8532525	8532542	56	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 2542 2566 +
Chr2	stalkie_big_nohaplotig	exon	8536588	8536597	100	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 2567 2576 +
Chr2	stalkie_big_nohaplotig	exon	8543018	8543028	37	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 2577 2592 +
Chr2	stalkie_big_nohaplotig	exon	8549706	8549714	100	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 2593 2601 +
Chr2	stalkie_big_nohaplotig	exon	8556438	8556498	55	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 2602 2671 +
Chr2	stalkie_big_nohaplotig	exon	8557005	8557015	100	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 2672 2682 +
Chr2	stalkie_big_nohaplotig	exon	8562471	8562476	100	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 2705 2710 +
Chr2	stalkie_big_nohaplotig	exon	8563401	8563405	100	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 2711 2715 +
Chr2	stalkie_big_nohaplotig	exon	8564565	8564567	100	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 2716 2718 +
Chr2	stalkie_big_nohaplotig	exon	8567897	8567910	85	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 2719 2732 +
Chr2	stalkie_big_nohaplotig	exon	8575018	8575093	53	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 2733 2809 +
Chr2	stalkie_big_nohaplotig	exon	8582322	8582331	100	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 2810 2819 +
Chr2	stalkie_big_nohaplotig	exon	8587057	8587071	93	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 2843 2857 +
Chr2	stalkie_big_nohaplotig	exon	8594738	8594743	100	+	.	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 2858 2863 +
Chr2	stalkie_big_nohaplotig	CDS	7107901	7108174	.	+	0	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 646 919 +
Chr2	stalkie_big_nohaplotig	CDS	7122829	7123038	.	+	2	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 920 1129 +
Chr2	stalkie_big_nohaplotig	CDS	7130198	7130363	.	+	2	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 1130 1295 +
Chr2	stalkie_big_nohaplotig	CDS	7130440	7130556	.	+	1	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 1296 1412 +
Chr2	stalkie_big_nohaplotig	CDS	7131551	7131680	.	+	1	Parent=comp160268_c0_seq1.mrna1;Target=comp160268_c0_seq1 1413 1542 +
Chr2	stalkie_big_nohaplotig	mRNA	7121704	7131677	.	+	.	ID=FBgn0003162.1.mrna1;geneID=FBgn0003162.1.path1;Name=FBgn0003162.1;Dir=sensecoverage=99.9;identity=99.7;matches=977;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014446
Chr2	stalkie_big_nohaplotig	exon	7121704	7122063	99	+	.	Parent=FBgn0003162.1.mrna1;Target=FBgn0003162.1 2 361 +
Chr2	stalkie_big_nohaplotig	exon	7122829	7123038	99	+	.	Parent=FBgn0003162.1.mrna1;Target=FBgn0003162.1 362 571 +
Chr2	stalkie_big_nohaplotig	exon	7130198	7130363	100	+	.	Parent=FBgn0003162.1.mrna1;Target=FBgn0003162.1 572 737 +
Chr2	stalkie_big_nohaplotig	exon	7130440	7130556	100	+	.	Parent=FBgn0003162.1.mrna1;Target=FBgn0003162.1 738 854 +
Chr2	stalkie_big_nohaplotig	exon	7131551	7131677	100	+	.	Parent=FBgn0003162.1.mrna1;Target=FBgn0003162.1 855 981 +
Chr2	stalkie_big_nohaplotig	CDS	7121706	7122063	.	+	0	Parent=FBgn0003162.1.mrna1;Target=FBgn0003162.1 4 361 +
Chr2	stalkie_big_nohaplotig	CDS	7122829	7123038	.	+	2	Parent=FBgn0003162.1.mrna1;Target=FBgn0003162.1 362 571 +
Chr2	stalkie_big_nohaplotig	CDS	7130198	7130363	.	+	2	Parent=FBgn0003162.1.mrna1;Target=FBgn0003162.1 572 737 +
Chr2	stalkie_big_nohaplotig	CDS	7130440	7130556	.	+	1	Parent=FBgn0003162.1.mrna1;Target=FBgn0003162.1 738 854 +
Chr2	stalkie_big_nohaplotig	CDS	7131551	7131677	.	+	1	Parent=FBgn0003162.1.mrna1;Target=FBgn0003162.1 855 981 +
Chr2	gffcl	locus	7146074	7146439	.	+	.	ID=RLOC_00014447;geneIDs=comp138164_c0_seq1.path1;transcripts=comp138164_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7146074	7146439	.	+	.	ID=comp138164_c0_seq1.mrna1;geneID=comp138164_c0_seq1.path1;Name=comp138164_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=361;mismatches=5;indels=0;unknowns=0;Target=comp138164_c0_seq1 366 1 .;CDS_Target=comp138164_c0_seq1 239 3 .;locus=RLOC_00014447
Chr2	stalkie_big_nohaplotig	exon	7146074	7146439	98	+	.	Parent=comp138164_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7146076	7146312	.	+	0	Parent=comp138164_c0_seq1.mrna1
Chr2	gffcl	locus	7151306	7151782	.	-	.	ID=RLOC_00014448;geneIDs=comp77454_c0_seq1.path1;transcripts=comp77454_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7151306	7151782	.	-	.	ID=comp77454_c0_seq1.mrna1;geneID=comp77454_c0_seq1.path1;Name=comp77454_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=474;mismatches=3;indels=1;unknowns=0;Target=comp77454_c0_seq1 478 1 .;CDS_Target=comp77454_c0_seq1 465 409 .;locus=RLOC_00014448
Chr2	stalkie_big_nohaplotig	exon	7151306	7151782	99	-	.	Parent=comp77454_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7151319	7151375	.	-	0	Parent=comp77454_c0_seq1.mrna1
Chr2	gffcl	locus	7154537	7155546	.	+	.	ID=RLOC_00014449;geneIDs=FBgn0031951.1.path1;transcripts=FBgn0031951.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7154537	7155546	.	+	.	ID=FBgn0031951.1.mrna1;geneID=FBgn0031951.1.path1;Name=FBgn0031951.1;Dir=sensecoverage=100.0;identity=99.6;matches=941;mismatches=4;indels=0;unknowns=0;locus=RLOC_00014449
Chr2	stalkie_big_nohaplotig	exon	7154537	7155067	99	+	.	Parent=FBgn0031951.1.mrna1;Target=FBgn0031951.1 1 531 +
Chr2	stalkie_big_nohaplotig	exon	7155133	7155546	99	+	.	Parent=FBgn0031951.1.mrna1;Target=FBgn0031951.1 532 945 +
Chr2	stalkie_big_nohaplotig	CDS	7154537	7155067	.	+	0	Parent=FBgn0031951.1.mrna1;Target=FBgn0031951.1 1 531 +
Chr2	stalkie_big_nohaplotig	CDS	7155133	7155546	.	+	0	Parent=FBgn0031951.1.mrna1;Target=FBgn0031951.1 532 945 +
Chr2	gffcl	locus	7158671	7162794	.	+	.	ID=RLOC_00014450;geneIDs=FBgn0086532.1.path1;transcripts=FBgn0086532.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7158671	7162794	.	+	.	ID=FBgn0086532.1.mrna1;geneID=FBgn0086532.1.path1;Name=FBgn0086532.1;Dir=sensecoverage=100.0;identity=100.0;matches=1404;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014450
Chr2	stalkie_big_nohaplotig	exon	7158671	7158724	100	+	.	Parent=FBgn0086532.1.mrna1;Target=FBgn0086532.1 1 54 +
Chr2	stalkie_big_nohaplotig	exon	7159969	7160462	100	+	.	Parent=FBgn0086532.1.mrna1;Target=FBgn0086532.1 55 548 +
Chr2	stalkie_big_nohaplotig	exon	7160531	7160660	100	+	.	Parent=FBgn0086532.1.mrna1;Target=FBgn0086532.1 549 678 +
Chr2	stalkie_big_nohaplotig	exon	7160732	7160929	100	+	.	Parent=FBgn0086532.1.mrna1;Target=FBgn0086532.1 679 876 +
Chr2	stalkie_big_nohaplotig	exon	7160994	7161359	100	+	.	Parent=FBgn0086532.1.mrna1;Target=FBgn0086532.1 877 1242 +
Chr2	stalkie_big_nohaplotig	exon	7162633	7162794	100	+	.	Parent=FBgn0086532.1.mrna1;Target=FBgn0086532.1 1243 1404 +
Chr2	stalkie_big_nohaplotig	CDS	7158671	7158724	.	+	0	Parent=FBgn0086532.1.mrna1;Target=FBgn0086532.1 1 54 +
Chr2	stalkie_big_nohaplotig	CDS	7159969	7160462	.	+	0	Parent=FBgn0086532.1.mrna1;Target=FBgn0086532.1 55 548 +
Chr2	stalkie_big_nohaplotig	CDS	7160531	7160660	.	+	1	Parent=FBgn0086532.1.mrna1;Target=FBgn0086532.1 549 678 +
Chr2	stalkie_big_nohaplotig	CDS	7160732	7160929	.	+	0	Parent=FBgn0086532.1.mrna1;Target=FBgn0086532.1 679 876 +
Chr2	stalkie_big_nohaplotig	CDS	7160994	7161359	.	+	0	Parent=FBgn0086532.1.mrna1;Target=FBgn0086532.1 877 1242 +
Chr2	stalkie_big_nohaplotig	CDS	7162633	7162794	.	+	0	Parent=FBgn0086532.1.mrna1;Target=FBgn0086532.1 1243 1404 +
Chr2	gffcl	locus	7163261	7168148	.	-	.	ID=RLOC_00014451;geneIDs=FBgn0053138.1.path1;transcripts=FBgn0053138.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7163261	7168148	.	-	.	ID=FBgn0053138.1.mrna1;geneID=FBgn0053138.1.path1;Name=FBgn0053138.1;Dir=sensecoverage=100.0;identity=100.0;matches=2082;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014451
Chr2	stalkie_big_nohaplotig	exon	7163261	7163308	100	-	.	Parent=FBgn0053138.1.mrna1;Target=FBgn0053138.1 2035 2082 +
Chr2	stalkie_big_nohaplotig	exon	7163369	7164184	100	-	.	Parent=FBgn0053138.1.mrna1;Target=FBgn0053138.1 1219 2034 +
Chr2	stalkie_big_nohaplotig	exon	7164258	7164429	100	-	.	Parent=FBgn0053138.1.mrna1;Target=FBgn0053138.1 1047 1218 +
Chr2	stalkie_big_nohaplotig	exon	7164507	7165275	100	-	.	Parent=FBgn0053138.1.mrna1;Target=FBgn0053138.1 278 1046 +
Chr2	stalkie_big_nohaplotig	exon	7165344	7165513	100	-	.	Parent=FBgn0053138.1.mrna1;Target=FBgn0053138.1 108 277 +
Chr2	stalkie_big_nohaplotig	exon	7168042	7168148	100	-	.	Parent=FBgn0053138.1.mrna1;Target=FBgn0053138.1 1 107 +
Chr2	stalkie_big_nohaplotig	CDS	7163261	7163308	.	-	0	Parent=FBgn0053138.1.mrna1;Target=FBgn0053138.1 2035 2082 +
Chr2	stalkie_big_nohaplotig	CDS	7163369	7164184	.	-	0	Parent=FBgn0053138.1.mrna1;Target=FBgn0053138.1 1219 2034 +
Chr2	stalkie_big_nohaplotig	CDS	7164258	7164429	.	-	1	Parent=FBgn0053138.1.mrna1;Target=FBgn0053138.1 1047 1218 +
Chr2	stalkie_big_nohaplotig	CDS	7164507	7165275	.	-	2	Parent=FBgn0053138.1.mrna1;Target=FBgn0053138.1 278 1046 +
Chr2	stalkie_big_nohaplotig	CDS	7165344	7165513	.	-	1	Parent=FBgn0053138.1.mrna1;Target=FBgn0053138.1 108 277 +
Chr2	stalkie_big_nohaplotig	CDS	7168042	7168148	.	-	0	Parent=FBgn0053138.1.mrna1;Target=FBgn0053138.1 1 107 +
Chr2	gffcl	locus	7173628	9156665	.	.	.	ID=RLOC_00014452;geneIDs=FBgn0034027.1.path1,FBgn0053182.1.path1,comp151278_c0_seq1.path1,comp162812_c4_seq1.path1;transcripts=FBgn0053182.1.mrna1,comp162812_c4_seq1.mrna1,comp151278_c0_seq1.mrna1,FBgn0034027.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7173628	7190345	.	-	.	ID=FBgn0053182.1.mrna1;geneID=FBgn0053182.1.path1;Name=FBgn0053182.1;Dir=sensecoverage=52.6;identity=99.4;matches=3077;mismatches=7;indels=12;unknowns=0;locus=RLOC_00014452
Chr2	stalkie_big_nohaplotig	exon	7173628	7174361	98	-	.	Parent=FBgn0053182.1.mrna1;Target=FBgn0053182.1 2357 3084 +
Chr2	stalkie_big_nohaplotig	exon	7184626	7185264	98	-	.	Parent=FBgn0053182.1.mrna1;Target=FBgn0053182.1 1724 2356 +
Chr2	stalkie_big_nohaplotig	exon	7187165	7187428	100	-	.	Parent=FBgn0053182.1.mrna1;Target=FBgn0053182.1 1460 1723 +
Chr2	stalkie_big_nohaplotig	exon	7187657	7187955	100	-	.	Parent=FBgn0053182.1.mrna1;Target=FBgn0053182.1 1161 1459 +
Chr2	stalkie_big_nohaplotig	exon	7188019	7188189	100	-	.	Parent=FBgn0053182.1.mrna1;Target=FBgn0053182.1 990 1160 +
Chr2	stalkie_big_nohaplotig	exon	7188261	7188409	100	-	.	Parent=FBgn0053182.1.mrna1;Target=FBgn0053182.1 841 989 +
Chr2	stalkie_big_nohaplotig	exon	7189440	7189778	99	-	.	Parent=FBgn0053182.1.mrna1;Target=FBgn0053182.1 502 840 +
Chr2	stalkie_big_nohaplotig	exon	7189845	7190345	100	-	.	Parent=FBgn0053182.1.mrna1;Target=FBgn0053182.1 1 501 +
Chr2	stalkie_big_nohaplotig	CDS	7173628	7174361	.	-	2	Parent=FBgn0053182.1.mrna1;Target=FBgn0053182.1 2357 3084 +
Chr2	stalkie_big_nohaplotig	CDS	7184626	7185264	.	-	2	Parent=FBgn0053182.1.mrna1;Target=FBgn0053182.1 1724 2356 +
Chr2	stalkie_big_nohaplotig	CDS	7187165	7187428	.	-	2	Parent=FBgn0053182.1.mrna1;Target=FBgn0053182.1 1460 1723 +
Chr2	stalkie_big_nohaplotig	CDS	7187657	7187955	.	-	1	Parent=FBgn0053182.1.mrna1;Target=FBgn0053182.1 1161 1459 +
Chr2	stalkie_big_nohaplotig	CDS	7188019	7188189	.	-	1	Parent=FBgn0053182.1.mrna1;Target=FBgn0053182.1 990 1160 +
Chr2	stalkie_big_nohaplotig	CDS	7188261	7188409	.	-	0	Parent=FBgn0053182.1.mrna1;Target=FBgn0053182.1 841 989 +
Chr2	stalkie_big_nohaplotig	CDS	7189440	7189778	.	-	0	Parent=FBgn0053182.1.mrna1;Target=FBgn0053182.1 502 840 +
Chr2	stalkie_big_nohaplotig	CDS	7189845	7190345	.	-	0	Parent=FBgn0053182.1.mrna1;Target=FBgn0053182.1 1 501 +
Chr2	stalkie_big_nohaplotig	mRNA	7184626	7217334	.	-	.	ID=comp162812_c4_seq1.mrna1;geneID=comp162812_c4_seq1.path1;Name=comp162812_c4_seq1;Dir=indeterminatecoverage=51.8;identity=99.5;matches=4102;mismatches=15;indels=6;unknowns=0;locus=RLOC_00014452
Chr2	stalkie_big_nohaplotig	exon	7184626	7185264	98	-	.	Parent=comp162812_c4_seq1.mrna1;Target=comp162812_c4_seq1 4119 3487 .
Chr2	stalkie_big_nohaplotig	exon	7187165	7187428	100	-	.	Parent=comp162812_c4_seq1.mrna1;Target=comp162812_c4_seq1 3486 3223 .
Chr2	stalkie_big_nohaplotig	exon	7187657	7187955	100	-	.	Parent=comp162812_c4_seq1.mrna1;Target=comp162812_c4_seq1 3222 2924 .
Chr2	stalkie_big_nohaplotig	exon	7188019	7188189	100	-	.	Parent=comp162812_c4_seq1.mrna1;Target=comp162812_c4_seq1 2923 2753 .
Chr2	stalkie_big_nohaplotig	exon	7188261	7188409	100	-	.	Parent=comp162812_c4_seq1.mrna1;Target=comp162812_c4_seq1 2752 2604 .
Chr2	stalkie_big_nohaplotig	exon	7189440	7189778	99	-	.	Parent=comp162812_c4_seq1.mrna1;Target=comp162812_c4_seq1 2603 2265 .
Chr2	stalkie_big_nohaplotig	exon	7189845	7190410	100	-	.	Parent=comp162812_c4_seq1.mrna1;Target=comp162812_c4_seq1 2264 1699 .
Chr2	stalkie_big_nohaplotig	exon	7210827	7211540	99	-	.	Parent=comp162812_c4_seq1.mrna1;Target=comp162812_c4_seq1 1698 985 .
Chr2	stalkie_big_nohaplotig	exon	7212839	7213134	98	-	.	Parent=comp162812_c4_seq1.mrna1;Target=comp162812_c4_seq1 984 689 .
Chr2	stalkie_big_nohaplotig	exon	7213218	7213387	100	-	.	Parent=comp162812_c4_seq1.mrna1;Target=comp162812_c4_seq1 688 519 .
Chr2	stalkie_big_nohaplotig	exon	7216043	7216214	100	-	.	Parent=comp162812_c4_seq1.mrna1;Target=comp162812_c4_seq1 518 347 .
Chr2	stalkie_big_nohaplotig	exon	7216442	7216591	100	-	.	Parent=comp162812_c4_seq1.mrna1;Target=comp162812_c4_seq1 346 197 .
Chr2	stalkie_big_nohaplotig	exon	7217141	7217334	100	-	.	Parent=comp162812_c4_seq1.mrna1;Target=comp162812_c4_seq1 196 3 .
Chr2	stalkie_big_nohaplotig	CDS	7184627	7185264	.	-	2	Parent=comp162812_c4_seq1.mrna1;Target=comp162812_c4_seq1 4118 3487 .
Chr2	stalkie_big_nohaplotig	CDS	7187165	7187428	.	-	2	Parent=comp162812_c4_seq1.mrna1;Target=comp162812_c4_seq1 3486 3223 .
Chr2	stalkie_big_nohaplotig	CDS	7187657	7187955	.	-	1	Parent=comp162812_c4_seq1.mrna1;Target=comp162812_c4_seq1 3222 2924 .
Chr2	stalkie_big_nohaplotig	CDS	7188019	7188189	.	-	1	Parent=comp162812_c4_seq1.mrna1;Target=comp162812_c4_seq1 2923 2753 .
Chr2	stalkie_big_nohaplotig	CDS	7188261	7188409	.	-	0	Parent=comp162812_c4_seq1.mrna1;Target=comp162812_c4_seq1 2752 2604 .
Chr2	stalkie_big_nohaplotig	CDS	7189440	7189778	.	-	0	Parent=comp162812_c4_seq1.mrna1;Target=comp162812_c4_seq1 2603 2265 .
Chr2	stalkie_big_nohaplotig	CDS	7189845	7190279	.	-	0	Parent=comp162812_c4_seq1.mrna1;Target=comp162812_c4_seq1 2264 1830 .
Chr2	stalkie_big_nohaplotig	mRNA	7193080	9156665	.	-	.	ID=comp151278_c0_seq1.mrna1;geneID=comp151278_c0_seq1.path1;Name=comp151278_c0_seq1;Dir=indeterminatecoverage=61.8;identity=85.8;matches=284;mismatches=3;indels=44;unknowns=0;Target=comp151278_c0_seq1 101 42 .;locus=RLOC_00014452
Chr2	stalkie_big_nohaplotig	exon	7193080	7193085	100	-	.	Parent=comp151278_c0_seq1.mrna1;Target=comp151278_c0_seq1 351 346 .
Chr2	stalkie_big_nohaplotig	exon	7196566	7196571	100	-	.	Parent=comp151278_c0_seq1.mrna1;Target=comp151278_c0_seq1 345 340 .
Chr2	stalkie_big_nohaplotig	exon	7198248	7198258	100	-	.	Parent=comp151278_c0_seq1.mrna1;Target=comp151278_c0_seq1 339 329 .
Chr2	stalkie_big_nohaplotig	exon	7209528	7209533	100	-	.	Parent=comp151278_c0_seq1.mrna1;Target=comp151278_c0_seq1 328 323 .
Chr2	stalkie_big_nohaplotig	exon	7214603	7214605	100	-	.	Parent=comp151278_c0_seq1.mrna1;Target=comp151278_c0_seq1 322 320 .
Chr2	stalkie_big_nohaplotig	exon	7215265	7215268	100	-	.	Parent=comp151278_c0_seq1.mrna1;Target=comp151278_c0_seq1 319 316 .
Chr2	stalkie_big_nohaplotig	exon	7216583	7216588	100	-	.	Parent=comp151278_c0_seq1.mrna1;Target=comp151278_c0_seq1 315 310 .
Chr2	stalkie_big_nohaplotig	exon	7218700	7218707	100	-	.	Parent=comp151278_c0_seq1.mrna1;Target=comp151278_c0_seq1 309 302 .
Chr2	stalkie_big_nohaplotig	exon	7226557	7226560	100	-	.	Parent=comp151278_c0_seq1.mrna1;Target=comp151278_c0_seq1 301 298 .
Chr2	stalkie_big_nohaplotig	exon	7229360	7229368	100	-	.	Parent=comp151278_c0_seq1.mrna1;Target=comp151278_c0_seq1 297 289 .
Chr2	stalkie_big_nohaplotig	exon	7235638	7235688	19	-	.	Parent=comp151278_c0_seq1.mrna1;Target=comp151278_c0_seq1 226 217 .
Chr2	stalkie_big_nohaplotig	exon	9156453	9156665	97	-	.	Parent=comp151278_c0_seq1.mrna1;Target=comp151278_c0_seq1 216 1 .
Chr2	stalkie_big_nohaplotig	CDS	9156565	9156624	.	-	0	Parent=comp151278_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7218195	7219352	.	+	.	ID=FBgn0034027.1.mrna1;geneID=FBgn0034027.1.path1;Name=FBgn0034027.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1158;mismatches=0;indels=0;unknowns=0;Target=FBgn0034027.1 1158 1 .;locus=RLOC_00014452
Chr2	stalkie_big_nohaplotig	exon	7218195	7219352	100	+	.	Parent=FBgn0034027.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7218195	7219352	.	+	0	Parent=FBgn0034027.1.mrna1
Chr2	gffcl	locus	7174654	7175003	.	+	.	ID=RLOC_00014453;geneIDs=comp138745_c0_seq1.path1;transcripts=comp138745_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7174654	7175003	.	+	.	ID=comp138745_c0_seq1.mrna1;geneID=comp138745_c0_seq1.path1;Name=comp138745_c0_seq1;Dir=indeterminatecoverage=98.9;identity=92.7;matches=343;mismatches=5;indels=22;unknowns=0;Target=comp138745_c0_seq1 368 1 .;CDS_Target=comp138745_c0_seq1 115 62 .;locus=RLOC_00014453
Chr2	stalkie_big_nohaplotig	exon	7174654	7175003	92	+	.	Parent=comp138745_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7174715	7174768	.	+	0	Parent=comp138745_c0_seq1.mrna1
Chr2	gffcl	locus	7176835	7179511	.	-	.	ID=RLOC_00014454;geneIDs=FBgn0028991.path1;transcripts=FBgn0028991.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7176835	7179511	.	-	.	ID=FBgn0028991.mrna1;geneID=FBgn0028991.path1;Name=FBgn0028991;Dir=sensecoverage=100.0;identity=99.7;matches=1208;mismatches=4;indels=0;unknowns=0;locus=RLOC_00014454
Chr2	stalkie_big_nohaplotig	exon	7176835	7176868	100	-	.	Parent=FBgn0028991.mrna1;Target=FBgn0028991 1179 1212 +
Chr2	stalkie_big_nohaplotig	exon	7178334	7179511	99	-	.	Parent=FBgn0028991.mrna1;Target=FBgn0028991 1 1178 +
Chr2	stalkie_big_nohaplotig	CDS	7176835	7176868	.	-	1	Parent=FBgn0028991.mrna1;Target=FBgn0028991 1179 1212 +
Chr2	stalkie_big_nohaplotig	CDS	7178334	7179511	.	-	0	Parent=FBgn0028991.mrna1;Target=FBgn0028991 1 1178 +
Chr2	gffcl	locus	7211826	7217298	.	+	.	ID=RLOC_00014455;geneIDs=FBgn0034454.1.path1,comp1034616_c0_seq1.path1;transcripts=comp1034616_c0_seq1.mrna1,FBgn0034454.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7211826	7212859	.	+	.	ID=comp1034616_c0_seq1.mrna1;geneID=comp1034616_c0_seq1.path1;Name=comp1034616_c0_seq1;Dir=antisensecoverage=100.0;identity=96.5;matches=381;mismatches=14;indels=0;unknowns=0;Target=comp1034616_c0_seq1 300 395 .;locus=RLOC_00014455
Chr2	stalkie_big_nohaplotig	exon	7211826	7212197	96	+	.	Parent=comp1034616_c0_seq1.mrna1;Target=comp1034616_c0_seq1 24 395 -
Chr2	stalkie_big_nohaplotig	exon	7212837	7212859	100	+	.	Parent=comp1034616_c0_seq1.mrna1;Target=comp1034616_c0_seq1 1 23 -
Chr2	stalkie_big_nohaplotig	CDS	7211826	7211921	.	+	0	Parent=comp1034616_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7212835	7217298	.	+	.	ID=FBgn0034454.1.mrna1;geneID=FBgn0034454.1.path1;Name=FBgn0034454.1;Dir=sensecoverage=99.9;identity=99.5;matches=945;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014455
Chr2	stalkie_big_nohaplotig	exon	7212835	7213134	98	+	.	Parent=FBgn0034454.1.mrna1;Target=FBgn0034454.1 2 301 +
Chr2	stalkie_big_nohaplotig	exon	7213218	7213387	100	+	.	Parent=FBgn0034454.1.mrna1;Target=FBgn0034454.1 302 471 +
Chr2	stalkie_big_nohaplotig	exon	7216043	7216214	100	+	.	Parent=FBgn0034454.1.mrna1;Target=FBgn0034454.1 472 643 +
Chr2	stalkie_big_nohaplotig	exon	7216442	7216591	100	+	.	Parent=FBgn0034454.1.mrna1;Target=FBgn0034454.1 644 793 +
Chr2	stalkie_big_nohaplotig	exon	7217141	7217298	100	+	.	Parent=FBgn0034454.1.mrna1;Target=FBgn0034454.1 794 951 +
Chr2	stalkie_big_nohaplotig	CDS	7212837	7213134	.	+	0	Parent=FBgn0034454.1.mrna1;Target=FBgn0034454.1 4 301 +
Chr2	stalkie_big_nohaplotig	CDS	7213218	7213387	.	+	2	Parent=FBgn0034454.1.mrna1;Target=FBgn0034454.1 302 471 +
Chr2	stalkie_big_nohaplotig	CDS	7216043	7216214	.	+	0	Parent=FBgn0034454.1.mrna1;Target=FBgn0034454.1 472 643 +
Chr2	stalkie_big_nohaplotig	CDS	7216442	7216591	.	+	2	Parent=FBgn0034454.1.mrna1;Target=FBgn0034454.1 644 793 +
Chr2	stalkie_big_nohaplotig	CDS	7217141	7217298	.	+	2	Parent=FBgn0034454.1.mrna1;Target=FBgn0034454.1 794 951 +
Chr2	gffcl	locus	7220458	7223941	.	-	.	ID=RLOC_00014456;geneIDs=FBgn0040732.1.path1;transcripts=FBgn0040732.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7220458	7223941	.	-	.	ID=FBgn0040732.1.mrna1;geneID=FBgn0040732.1.path1;Name=FBgn0040732.1;Dir=sensecoverage=100.0;identity=100.0;matches=531;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014456
Chr2	stalkie_big_nohaplotig	exon	7220458	7220551	100	-	.	Parent=FBgn0040732.1.mrna1;Target=FBgn0040732.1 438 531 +
Chr2	stalkie_big_nohaplotig	exon	7220621	7220756	100	-	.	Parent=FBgn0040732.1.mrna1;Target=FBgn0040732.1 302 437 +
Chr2	stalkie_big_nohaplotig	exon	7220831	7220977	100	-	.	Parent=FBgn0040732.1.mrna1;Target=FBgn0040732.1 155 301 +
Chr2	stalkie_big_nohaplotig	exon	7223788	7223941	100	-	.	Parent=FBgn0040732.1.mrna1;Target=FBgn0040732.1 1 154 +
Chr2	stalkie_big_nohaplotig	CDS	7220458	7220551	.	-	1	Parent=FBgn0040732.1.mrna1;Target=FBgn0040732.1 438 531 +
Chr2	stalkie_big_nohaplotig	CDS	7220621	7220756	.	-	2	Parent=FBgn0040732.1.mrna1;Target=FBgn0040732.1 302 437 +
Chr2	stalkie_big_nohaplotig	CDS	7220831	7220977	.	-	2	Parent=FBgn0040732.1.mrna1;Target=FBgn0040732.1 155 301 +
Chr2	stalkie_big_nohaplotig	CDS	7223788	7223941	.	-	0	Parent=FBgn0040732.1.mrna1;Target=FBgn0040732.1 1 154 +
Chr2	gffcl	locus	7230744	7230991	.	+	.	ID=RLOC_00014457;geneIDs=comp88516_c0_seq1.path1;transcripts=comp88516_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7230744	7230991	.	+	.	ID=comp88516_c0_seq1.mrna1;geneID=comp88516_c0_seq1.path1;Name=comp88516_c0_seq1;Dir=indeterminatecoverage=81.5;identity=86.4;matches=229;mismatches=19;indels=17;unknowns=0;Target=comp88516_c0_seq1 323 59 .;CDS_Target=comp88516_c0_seq1 154 59 .;locus=RLOC_00014457
Chr2	stalkie_big_nohaplotig	exon	7230744	7230991	86	+	.	Parent=comp88516_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7230744	7230839	.	+	0	Parent=comp88516_c0_seq1.mrna1
Chr2	gffcl	locus	7234880	7235618	.	+	.	ID=RLOC_00014458;geneIDs=FBgn0033716.1.path1;transcripts=FBgn0033716.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7234880	7235618	.	+	.	ID=FBgn0033716.1.mrna1;geneID=FBgn0033716.1.path1;Name=FBgn0033716.1;Dir=sensecoverage=100.0;identity=99.9;matches=680;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014458
Chr2	stalkie_big_nohaplotig	exon	7234880	7235389	99	+	.	Parent=FBgn0033716.1.mrna1;Target=FBgn0033716.1 1 510 +
Chr2	stalkie_big_nohaplotig	exon	7235448	7235618	100	+	.	Parent=FBgn0033716.1.mrna1;Target=FBgn0033716.1 511 681 +
Chr2	stalkie_big_nohaplotig	CDS	7234880	7235389	.	+	0	Parent=FBgn0033716.1.mrna1;Target=FBgn0033716.1 1 510 +
Chr2	stalkie_big_nohaplotig	CDS	7235448	7235618	.	+	0	Parent=FBgn0033716.1.mrna1;Target=FBgn0033716.1 511 681 +
Chr2	gffcl	locus	7240085	7243086	.	-	.	ID=RLOC_00014459;geneIDs=comp162729_c1_seq1.path1;transcripts=comp162729_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7240085	7243086	.	-	.	ID=comp162729_c1_seq1.mrna1;geneID=comp162729_c1_seq1.path1;Name=comp162729_c1_seq1;Dir=indeterminatecoverage=53.7;identity=99.8;matches=2995;mismatches=7;indels=0;unknowns=0;Target=comp162729_c1_seq1 3002 1 .;CDS_Target=comp162729_c1_seq1 167 3 .;locus=RLOC_00014459
Chr2	stalkie_big_nohaplotig	exon	7240085	7243086	99	-	.	Parent=comp162729_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7242920	7243084	.	-	0	Parent=comp162729_c1_seq1.mrna1
Chr2	gffcl	locus	7248597	7249958	.	+	.	ID=RLOC_00014460;geneIDs=ORF875.path1;transcripts=ORF875.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7248597	7249958	.	+	.	ID=ORF875.mrna1;geneID=ORF875.path1;Name=ORF875;Dir=indeterminatecoverage=99.9;identity=98.9;matches=1354;mismatches=8;indels=7;unknowns=0;Target=ORF875 1371 3 .;CDS_Target=ORF875 50 3 .;locus=RLOC_00014460
Chr2	stalkie_big_nohaplotig	exon	7248597	7249958	98	+	.	Parent=ORF875.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7248597	7248643	.	+	0	Parent=ORF875.mrna1
Chr2	gffcl	locus	7251663	7253313	.	+	.	ID=RLOC_00014461;geneIDs=FBgn0263391.1.path2;transcripts=FBgn0263391.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	7251663	7253313	.	+	.	ID=FBgn0263391.1.mrna2;geneID=FBgn0263391.1.path2;Name=FBgn0263391.1;Dir=indeterminatecoverage=7.8;identity=100.0;matches=179;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014461
Chr2	stalkie_big_nohaplotig	exon	7251663	7251730	100	+	.	Parent=FBgn0263391.1.mrna2;Target=FBgn0263391.1 2196 2129 .
Chr2	stalkie_big_nohaplotig	exon	7253203	7253313	100	+	.	Parent=FBgn0263391.1.mrna2;Target=FBgn0263391.1 2307 2197 .
Chr2	stalkie_big_nohaplotig	CDS	7251663	7251730	.	+	1	Parent=FBgn0263391.1.mrna2;Target=FBgn0263391.1 2196 2129 .
Chr2	stalkie_big_nohaplotig	CDS	7253203	7253313	.	+	2	Parent=FBgn0263391.1.mrna2;Target=FBgn0263391.1 2307 2197 .
Chr2	gffcl	locus	7254430	7254716	.	-	.	ID=RLOC_00014462;geneIDs=comp131081_c0_seq1.path1;transcripts=comp131081_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7254430	7254716	.	-	.	ID=comp131081_c0_seq1.mrna1;geneID=comp131081_c0_seq1.path1;Name=comp131081_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=286;mismatches=1;indels=1;unknowns=0;Target=comp131081_c0_seq1 288 1 .;CDS_Target=comp131081_c0_seq1 86 54 .;locus=RLOC_00014462
Chr2	stalkie_big_nohaplotig	exon	7254430	7254716	99	-	.	Parent=comp131081_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7254631	7254663	.	-	0	Parent=comp131081_c0_seq1.mrna1
Chr2	gffcl	locus	7254961	7256653	.	-	.	ID=RLOC_00014463;geneIDs=comp158127_c0_seq1.path1;transcripts=comp158127_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7254961	7256653	.	-	.	ID=comp158127_c0_seq1.mrna1;geneID=comp158127_c0_seq1.path1;Name=comp158127_c0_seq1;Dir=indeterminatecoverage=52.6;identity=98.2;matches=1672;mismatches=21;indels=10;unknowns=0;Target=comp158127_c0_seq1 1717 15 .;CDS_Target=comp158127_c0_seq1 836 648 .;locus=RLOC_00014463
Chr2	stalkie_big_nohaplotig	exon	7254961	7256653	98	-	.	Parent=comp158127_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7255832	7256020	.	-	0	Parent=comp158127_c0_seq1.mrna1
Chr2	gffcl	locus	7257726	7258904	.	+	.	ID=RLOC_00014464;geneIDs=comp148015_c0_seq1.path1;transcripts=comp148015_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7257726	7258904	.	+	.	ID=comp148015_c0_seq1.mrna1;geneID=comp148015_c0_seq1.path1;Name=comp148015_c0_seq1;Dir=antisensecoverage=96.0;identity=98.9;matches=1015;mismatches=7;indels=4;unknowns=0;locus=RLOC_00014464
Chr2	stalkie_big_nohaplotig	exon	7257726	7258288	98	+	.	Parent=comp148015_c0_seq1.mrna1;Target=comp148015_c0_seq1 503 1065 -
Chr2	stalkie_big_nohaplotig	exon	7258445	7258904	99	+	.	Parent=comp148015_c0_seq1.mrna1;Target=comp148015_c0_seq1 41 502 -
Chr2	stalkie_big_nohaplotig	CDS	7258250	7258288	.	+	0	Parent=comp148015_c0_seq1.mrna1;Target=comp148015_c0_seq1 503 541 .
Chr2	stalkie_big_nohaplotig	CDS	7258445	7258648	.	+	0	Parent=comp148015_c0_seq1.mrna1;Target=comp148015_c0_seq1 299 502 .
Chr2	gffcl	locus	7259075	7259493	.	-	.	ID=RLOC_00014465;geneIDs=comp151425_c0_seq1.path2;transcripts=comp151425_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	7259075	7259493	.	-	.	ID=comp151425_c0_seq1.mrna2;geneID=comp151425_c0_seq1.path2;Name=comp151425_c0_seq1;Dir=indeterminatecoverage=24.8;identity=97.6;matches=412;mismatches=6;indels=4;unknowns=0;Target=comp151425_c0_seq1 1695 1275 .;locus=RLOC_00014465
Chr2	stalkie_big_nohaplotig	exon	7259075	7259493	97	-	.	Parent=comp151425_c0_seq1.mrna2
Chr2	gffcl	locus	7262628	7268365	.	+	.	ID=RLOC_00014466;geneIDs=FBgn0261439.2.path1;transcripts=FBgn0261439.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7262628	7268365	.	+	.	ID=FBgn0261439.2.mrna1;geneID=FBgn0261439.2.path1;Name=FBgn0261439.2;Dir=sensecoverage=100.0;identity=99.7;matches=2022;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014466
Chr2	stalkie_big_nohaplotig	exon	7262628	7262732	100	+	.	Parent=FBgn0261439.2.mrna1;Target=FBgn0261439.2 1 105 +
Chr2	stalkie_big_nohaplotig	exon	7266179	7266693	99	+	.	Parent=FBgn0261439.2.mrna1;Target=FBgn0261439.2 106 620 +
Chr2	stalkie_big_nohaplotig	exon	7266757	7267633	99	+	.	Parent=FBgn0261439.2.mrna1;Target=FBgn0261439.2 621 1497 +
Chr2	stalkie_big_nohaplotig	exon	7267696	7267898	99	+	.	Parent=FBgn0261439.2.mrna1;Target=FBgn0261439.2 1498 1700 +
Chr2	stalkie_big_nohaplotig	exon	7267967	7268117	99	+	.	Parent=FBgn0261439.2.mrna1;Target=FBgn0261439.2 1701 1851 +
Chr2	stalkie_big_nohaplotig	exon	7268189	7268365	100	+	.	Parent=FBgn0261439.2.mrna1;Target=FBgn0261439.2 1852 2028 +
Chr2	stalkie_big_nohaplotig	CDS	7262628	7262732	.	+	0	Parent=FBgn0261439.2.mrna1;Target=FBgn0261439.2 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	7266179	7266693	.	+	0	Parent=FBgn0261439.2.mrna1;Target=FBgn0261439.2 106 620 +
Chr2	stalkie_big_nohaplotig	CDS	7266757	7267633	.	+	1	Parent=FBgn0261439.2.mrna1;Target=FBgn0261439.2 621 1497 +
Chr2	stalkie_big_nohaplotig	CDS	7267696	7267898	.	+	0	Parent=FBgn0261439.2.mrna1;Target=FBgn0261439.2 1498 1700 +
Chr2	stalkie_big_nohaplotig	CDS	7267967	7268117	.	+	1	Parent=FBgn0261439.2.mrna1;Target=FBgn0261439.2 1701 1851 +
Chr2	stalkie_big_nohaplotig	CDS	7268189	7268365	.	+	0	Parent=FBgn0261439.2.mrna1;Target=FBgn0261439.2 1852 2028 +
Chr2	stalkie_big_nohaplotig	mRNA	7263069	7280507	.	+	.	ID=comp154690_c0_seq1.mrna1;geneID=comp154690_c0_seq1.path1;Name=comp154690_c0_seq1;Dir=sensecoverage=90.7;identity=97.9;matches=1144;mismatches=16;indels=9;unknowns=0;Target=comp154690_c0_seq1 45 185 +;locus=RLOC_00014467
Chr2	stalkie_big_nohaplotig	exon	7263069	7263744	98	+	.	Parent=comp154690_c0_seq1.mrna1;Target=comp154690_c0_seq1 2 677 +
Chr2	stalkie_big_nohaplotig	exon	7264466	7264927	96	+	.	Parent=comp154690_c0_seq1.mrna1;Target=comp154690_c0_seq1 678 1146 +
Chr2	stalkie_big_nohaplotig	exon	7265727	7265734	100	+	.	Parent=comp154690_c0_seq1.mrna1;Target=comp154690_c0_seq1 1161 1168 +
Chr2	stalkie_big_nohaplotig	exon	7265757	7265759	100	+	.	Parent=comp154690_c0_seq1.mrna1;Target=comp154690_c0_seq1 1199 1201 +
Chr2	stalkie_big_nohaplotig	exon	7280483	7280491	100	+	.	Parent=comp154690_c0_seq1.mrna1;Target=comp154690_c0_seq1 1202 1210 +
Chr2	stalkie_big_nohaplotig	exon	7280505	7280507	100	+	.	Parent=comp154690_c0_seq1.mrna1;Target=comp154690_c0_seq1 1223 1225 +
Chr2	stalkie_big_nohaplotig	CDS	7263112	7263252	.	+	0	Parent=comp154690_c0_seq1.mrna1
Chr2	gffcl	locus	7269024	7271520	.	.	.	ID=RLOC_00014468;geneIDs=FBgn0034442.1.path1,comp149515_c0_seq1.path1;transcripts=FBgn0034442.1.mrna1,comp149515_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7269024	7271520	.	-	.	ID=FBgn0034442.1.mrna1;geneID=FBgn0034442.1.path1;Name=FBgn0034442.1;Dir=sensecoverage=100.0;identity=99.4;matches=1628;mismatches=10;indels=0;unknowns=0;locus=RLOC_00014468
Chr2	stalkie_big_nohaplotig	exon	7269024	7269240	99	-	.	Parent=FBgn0034442.1.mrna1;Target=FBgn0034442.1 1422 1638 +
Chr2	stalkie_big_nohaplotig	exon	7269308	7269397	100	-	.	Parent=FBgn0034442.1.mrna1;Target=FBgn0034442.1 1332 1421 +
Chr2	stalkie_big_nohaplotig	exon	7270070	7270382	99	-	.	Parent=FBgn0034442.1.mrna1;Target=FBgn0034442.1 1019 1331 +
Chr2	stalkie_big_nohaplotig	exon	7270437	7271108	99	-	.	Parent=FBgn0034442.1.mrna1;Target=FBgn0034442.1 347 1018 +
Chr2	stalkie_big_nohaplotig	exon	7271175	7271520	99	-	.	Parent=FBgn0034442.1.mrna1;Target=FBgn0034442.1 1 346 +
Chr2	stalkie_big_nohaplotig	CDS	7269024	7269240	.	-	1	Parent=FBgn0034442.1.mrna1;Target=FBgn0034442.1 1422 1638 +
Chr2	stalkie_big_nohaplotig	CDS	7269308	7269397	.	-	1	Parent=FBgn0034442.1.mrna1;Target=FBgn0034442.1 1332 1421 +
Chr2	stalkie_big_nohaplotig	CDS	7270070	7270382	.	-	2	Parent=FBgn0034442.1.mrna1;Target=FBgn0034442.1 1019 1331 +
Chr2	stalkie_big_nohaplotig	CDS	7270437	7271108	.	-	2	Parent=FBgn0034442.1.mrna1;Target=FBgn0034442.1 347 1018 +
Chr2	stalkie_big_nohaplotig	CDS	7271175	7271520	.	-	0	Parent=FBgn0034442.1.mrna1;Target=FBgn0034442.1 1 346 +
Chr2	stalkie_big_nohaplotig	mRNA	7269374	7269747	.	+	.	ID=comp149515_c0_seq1.mrna1;geneID=comp149515_c0_seq1.path1;Name=comp149515_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=371;mismatches=3;indels=0;unknowns=0;Target=comp149515_c0_seq1 374 1 .;CDS_Target=comp149515_c0_seq1 373 227 .;locus=RLOC_00014468
Chr2	stalkie_big_nohaplotig	exon	7269374	7269747	99	+	.	Parent=comp149515_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7269600	7269746	.	+	0	Parent=comp149515_c0_seq1.mrna1
Chr2	gffcl	locus	7274598	7275227	.	+	.	ID=RLOC_00014469;geneIDs=comp147665_c0_seq1.path1;transcripts=comp147665_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7274598	7275227	.	+	.	ID=comp147665_c0_seq1.mrna1;geneID=comp147665_c0_seq1.path1;Name=comp147665_c0_seq1;Dir=indeterminatecoverage=91.5;identity=94.5;matches=479;mismatches=23;indels=5;unknowns=0;locus=RLOC_00014469
Chr2	stalkie_big_nohaplotig	exon	7274598	7274743	93	+	.	Parent=comp147665_c0_seq1.mrna1;Target=comp147665_c0_seq1 171 24 .
Chr2	stalkie_big_nohaplotig	exon	7274872	7275227	94	+	.	Parent=comp147665_c0_seq1.mrna1;Target=comp147665_c0_seq1 530 172 .
Chr2	stalkie_big_nohaplotig	CDS	7274725	7274743	.	+	0	Parent=comp147665_c0_seq1.mrna1;Target=comp147665_c0_seq1 171 153 .
Chr2	stalkie_big_nohaplotig	CDS	7274872	7274956	.	+	2	Parent=comp147665_c0_seq1.mrna1;Target=comp147665_c0_seq1 257 172 .
Chr2	gffcl	locus	7292674	7294818	.	+	.	ID=RLOC_00014470;geneIDs=FBgn0033717.1.path1;transcripts=FBgn0033717.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7292674	7294818	.	+	.	ID=FBgn0033717.1.mrna1;geneID=FBgn0033717.1.path1;Name=FBgn0033717.1;Dir=sensecoverage=100.0;identity=99.1;matches=1612;mismatches=14;indels=0;unknowns=0;locus=RLOC_00014470
Chr2	stalkie_big_nohaplotig	exon	7292674	7292895	99	+	.	Parent=FBgn0033717.1.mrna1;Target=FBgn0033717.1 1 222 +
Chr2	stalkie_big_nohaplotig	exon	7292951	7293170	100	+	.	Parent=FBgn0033717.1.mrna1;Target=FBgn0033717.1 223 442 +
Chr2	stalkie_big_nohaplotig	exon	7293635	7294818	98	+	.	Parent=FBgn0033717.1.mrna1;Target=FBgn0033717.1 443 1626 +
Chr2	stalkie_big_nohaplotig	CDS	7292674	7292895	.	+	0	Parent=FBgn0033717.1.mrna1;Target=FBgn0033717.1 1 222 +
Chr2	stalkie_big_nohaplotig	CDS	7292951	7293170	.	+	0	Parent=FBgn0033717.1.mrna1;Target=FBgn0033717.1 223 442 +
Chr2	stalkie_big_nohaplotig	CDS	7293635	7294818	.	+	2	Parent=FBgn0033717.1.mrna1;Target=FBgn0033717.1 443 1626 +
Chr2	gffcl	locus	7315789	7320688	.	+	.	ID=RLOC_00014471;geneIDs=FBgn0036299.1.path1;transcripts=FBgn0036299.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7315789	7320688	.	+	.	ID=FBgn0036299.1.mrna1;geneID=FBgn0036299.1.path1;Name=FBgn0036299.1;Dir=sensecoverage=100.0;identity=99.4;matches=2520;mismatches=15;indels=0;unknowns=0;locus=RLOC_00014471
Chr2	stalkie_big_nohaplotig	exon	7315789	7315870	100	+	.	Parent=FBgn0036299.1.mrna1;Target=FBgn0036299.1 1 82 +
Chr2	stalkie_big_nohaplotig	exon	7316680	7317107	98	+	.	Parent=FBgn0036299.1.mrna1;Target=FBgn0036299.1 83 510 +
Chr2	stalkie_big_nohaplotig	exon	7317173	7317306	99	+	.	Parent=FBgn0036299.1.mrna1;Target=FBgn0036299.1 511 644 +
Chr2	stalkie_big_nohaplotig	exon	7318504	7318664	100	+	.	Parent=FBgn0036299.1.mrna1;Target=FBgn0036299.1 645 805 +
Chr2	stalkie_big_nohaplotig	exon	7318730	7319229	99	+	.	Parent=FBgn0036299.1.mrna1;Target=FBgn0036299.1 806 1305 +
Chr2	stalkie_big_nohaplotig	exon	7319295	7319459	98	+	.	Parent=FBgn0036299.1.mrna1;Target=FBgn0036299.1 1306 1470 +
Chr2	stalkie_big_nohaplotig	exon	7319560	7320226	99	+	.	Parent=FBgn0036299.1.mrna1;Target=FBgn0036299.1 1471 2137 +
Chr2	stalkie_big_nohaplotig	exon	7320291	7320688	99	+	.	Parent=FBgn0036299.1.mrna1;Target=FBgn0036299.1 2138 2535 +
Chr2	stalkie_big_nohaplotig	CDS	7315789	7315870	.	+	0	Parent=FBgn0036299.1.mrna1;Target=FBgn0036299.1 1 82 +
Chr2	stalkie_big_nohaplotig	CDS	7316680	7317107	.	+	2	Parent=FBgn0036299.1.mrna1;Target=FBgn0036299.1 83 510 +
Chr2	stalkie_big_nohaplotig	CDS	7317173	7317306	.	+	0	Parent=FBgn0036299.1.mrna1;Target=FBgn0036299.1 511 644 +
Chr2	stalkie_big_nohaplotig	CDS	7318504	7318664	.	+	1	Parent=FBgn0036299.1.mrna1;Target=FBgn0036299.1 645 805 +
Chr2	stalkie_big_nohaplotig	CDS	7318730	7319229	.	+	2	Parent=FBgn0036299.1.mrna1;Target=FBgn0036299.1 806 1305 +
Chr2	stalkie_big_nohaplotig	CDS	7319295	7319459	.	+	0	Parent=FBgn0036299.1.mrna1;Target=FBgn0036299.1 1306 1470 +
Chr2	stalkie_big_nohaplotig	CDS	7319560	7320226	.	+	0	Parent=FBgn0036299.1.mrna1;Target=FBgn0036299.1 1471 2137 +
Chr2	stalkie_big_nohaplotig	CDS	7320291	7320688	.	+	2	Parent=FBgn0036299.1.mrna1;Target=FBgn0036299.1 2138 2535 +
Chr2	gffcl	locus	7321125	7321628	.	-	.	ID=RLOC_00014472;geneIDs=comp150106_c0_seq1.path1;transcripts=comp150106_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7321125	7321628	.	-	.	ID=comp150106_c0_seq1.mrna1;geneID=comp150106_c0_seq1.path1;Name=comp150106_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=504;mismatches=0;indels=0;unknowns=0;Target=comp150106_c0_seq1 504 1 .;CDS_Target=comp150106_c0_seq1 126 43 .;locus=RLOC_00014472
Chr2	stalkie_big_nohaplotig	exon	7321125	7321628	100	-	.	Parent=comp150106_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7321503	7321586	.	-	0	Parent=comp150106_c0_seq1.mrna1
Chr2	gffcl	locus	7336220	7344365	.	.	.	ID=RLOC_00014473;geneIDs=FBgn0263391.1.path1,comp143879_c1_seq1.path1;transcripts=FBgn0263391.1.mrna1,comp143879_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7336220	7344365	.	-	.	ID=FBgn0263391.1.mrna1;geneID=FBgn0263391.1.path1;Name=FBgn0263391.1;Dir=sensecoverage=92.2;identity=100.0;matches=2127;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014473
Chr2	stalkie_big_nohaplotig	exon	7336220	7336288	100	-	.	Parent=FBgn0263391.1.mrna1;Target=FBgn0263391.1 2060 2128 +
Chr2	stalkie_big_nohaplotig	exon	7339125	7339196	100	-	.	Parent=FBgn0263391.1.mrna1;Target=FBgn0263391.1 1988 2059 +
Chr2	stalkie_big_nohaplotig	exon	7339389	7339517	100	-	.	Parent=FBgn0263391.1.mrna1;Target=FBgn0263391.1 1859 1987 +
Chr2	stalkie_big_nohaplotig	exon	7339588	7339882	100	-	.	Parent=FBgn0263391.1.mrna1;Target=FBgn0263391.1 1564 1858 +
Chr2	stalkie_big_nohaplotig	exon	7339950	7340060	100	-	.	Parent=FBgn0263391.1.mrna1;Target=FBgn0263391.1 1453 1563 +
Chr2	stalkie_big_nohaplotig	exon	7342112	7342238	100	-	.	Parent=FBgn0263391.1.mrna1;Target=FBgn0263391.1 1326 1452 +
Chr2	stalkie_big_nohaplotig	exon	7342879	7343578	99	-	.	Parent=FBgn0263391.1.mrna1;Target=FBgn0263391.1 626 1325 +
Chr2	stalkie_big_nohaplotig	exon	7343642	7344119	100	-	.	Parent=FBgn0263391.1.mrna1;Target=FBgn0263391.1 148 625 +
Chr2	stalkie_big_nohaplotig	exon	7344219	7344365	100	-	.	Parent=FBgn0263391.1.mrna1;Target=FBgn0263391.1 1 147 +
Chr2	stalkie_big_nohaplotig	CDS	7336220	7336288	.	-	2	Parent=FBgn0263391.1.mrna1;Target=FBgn0263391.1 2060 2128 +
Chr2	stalkie_big_nohaplotig	CDS	7339125	7339196	.	-	2	Parent=FBgn0263391.1.mrna1;Target=FBgn0263391.1 1988 2059 +
Chr2	stalkie_big_nohaplotig	CDS	7339389	7339517	.	-	2	Parent=FBgn0263391.1.mrna1;Target=FBgn0263391.1 1859 1987 +
Chr2	stalkie_big_nohaplotig	CDS	7339588	7339882	.	-	0	Parent=FBgn0263391.1.mrna1;Target=FBgn0263391.1 1564 1858 +
Chr2	stalkie_big_nohaplotig	CDS	7339950	7340060	.	-	0	Parent=FBgn0263391.1.mrna1;Target=FBgn0263391.1 1453 1563 +
Chr2	stalkie_big_nohaplotig	CDS	7342112	7342238	.	-	1	Parent=FBgn0263391.1.mrna1;Target=FBgn0263391.1 1326 1452 +
Chr2	stalkie_big_nohaplotig	CDS	7342879	7343578	.	-	2	Parent=FBgn0263391.1.mrna1;Target=FBgn0263391.1 626 1325 +
Chr2	stalkie_big_nohaplotig	CDS	7343642	7344119	.	-	0	Parent=FBgn0263391.1.mrna1;Target=FBgn0263391.1 148 625 +
Chr2	stalkie_big_nohaplotig	CDS	7344219	7344365	.	-	0	Parent=FBgn0263391.1.mrna1;Target=FBgn0263391.1 1 147 +
Chr2	stalkie_big_nohaplotig	mRNA	7341694	7342135	.	+	.	ID=comp143879_c1_seq1.mrna1;geneID=comp143879_c1_seq1.path1;Name=comp143879_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=440;mismatches=1;indels=1;unknowns=0;Target=comp143879_c1_seq1 441 1 .;CDS_Target=comp143879_c1_seq1 352 272 .;locus=RLOC_00014473
Chr2	stalkie_big_nohaplotig	exon	7341694	7342135	99	+	.	Parent=comp143879_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7341965	7342046	.	+	0	Parent=comp143879_c1_seq1.mrna1
Chr2	gffcl	locus	7337795	7338429	.	-	.	ID=RLOC_00014474;geneIDs=comp141786_c0_seq1.path1;transcripts=comp141786_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7337795	7338429	.	-	.	ID=comp141786_c0_seq1.mrna1;geneID=comp141786_c0_seq1.path1;Name=comp141786_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.8;matches=634;mismatches=1;indels=0;unknowns=0;Target=comp141786_c0_seq1 635 1 .;CDS_Target=comp141786_c0_seq1 44 3 .;locus=RLOC_00014474
Chr2	stalkie_big_nohaplotig	exon	7337795	7338429	99	-	.	Parent=comp141786_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7338386	7338427	.	-	0	Parent=comp141786_c0_seq1.mrna1
Chr2	gffcl	locus	7355044	7356084	.	+	.	ID=RLOC_00014475;geneIDs=comp120080_c0_seq1.path1;transcripts=comp120080_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7355044	7356084	.	+	.	ID=comp120080_c0_seq1.mrna1;geneID=comp120080_c0_seq1.path1;Name=comp120080_c0_seq1;Dir=antisensecoverage=99.9;identity=99.5;matches=783;mismatches=1;indels=3;unknowns=0;Target=comp120080_c0_seq1 527 673 .;locus=RLOC_00014475
Chr2	stalkie_big_nohaplotig	exon	7355044	7355422	98	+	.	Parent=comp120080_c0_seq1.mrna1;Target=comp120080_c0_seq1 407 788 -
Chr2	stalkie_big_nohaplotig	exon	7355680	7356084	100	+	.	Parent=comp120080_c0_seq1.mrna1;Target=comp120080_c0_seq1 2 406 -
Chr2	stalkie_big_nohaplotig	CDS	7355159	7355302	.	+	0	Parent=comp120080_c0_seq1.mrna1
Chr2	gffcl	locus	7362362	7363639	.	-	.	ID=RLOC_00014476;geneIDs=comp117865_c0_seq1.path1;transcripts=comp117865_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7362362	7363639	.	-	.	ID=comp117865_c0_seq1.mrna1;geneID=comp117865_c0_seq1.path1;Name=comp117865_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=352;mismatches=1;indels=0;unknowns=0;Target=comp117865_c0_seq1 44 112 .;locus=RLOC_00014476
Chr2	stalkie_big_nohaplotig	exon	7362362	7362385	100	-	.	Parent=comp117865_c0_seq1.mrna1;Target=comp117865_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	exon	7363311	7363639	99	-	.	Parent=comp117865_c0_seq1.mrna1;Target=comp117865_c0_seq1 25 353 -
Chr2	stalkie_big_nohaplotig	CDS	7363330	7363398	.	-	0	Parent=comp117865_c0_seq1.mrna1
Chr2	gffcl	locus	7371557	7375647	.	+	.	ID=RLOC_00014477;geneIDs=FBgn0021895.1.path1;transcripts=FBgn0021895.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7371557	7375647	.	+	.	ID=FBgn0021895.1.mrna1;geneID=FBgn0021895.1.path1;Name=FBgn0021895.1;Dir=sensecoverage=100.0;identity=100.0;matches=504;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014477
Chr2	stalkie_big_nohaplotig	exon	7371557	7371783	100	+	.	Parent=FBgn0021895.1.mrna1;Target=FBgn0021895.1 1 227 +
Chr2	stalkie_big_nohaplotig	exon	7375371	7375647	100	+	.	Parent=FBgn0021895.1.mrna1;Target=FBgn0021895.1 228 504 +
Chr2	stalkie_big_nohaplotig	CDS	7371557	7371783	.	+	0	Parent=FBgn0021895.1.mrna1;Target=FBgn0021895.1 1 227 +
Chr2	stalkie_big_nohaplotig	CDS	7375371	7375647	.	+	1	Parent=FBgn0021895.1.mrna1;Target=FBgn0021895.1 228 504 +
Chr2	gffcl	locus	7372867	7373610	.	+	.	ID=RLOC_00014478;geneIDs=FBgn0034915.1.path1;transcripts=FBgn0034915.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7372867	7373610	.	+	.	ID=FBgn0034915.1.mrna1;geneID=FBgn0034915.1.path1;Name=FBgn0034915.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=743;mismatches=1;indels=0;unknowns=0;Target=FBgn0034915.1 744 1 .;locus=RLOC_00014478
Chr2	stalkie_big_nohaplotig	exon	7372867	7373610	99	+	.	Parent=FBgn0034915.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7372867	7373610	.	+	0	Parent=FBgn0034915.1.mrna1
Chr2	gffcl	locus	7379728	7381678	.	-	.	ID=RLOC_00014479;geneIDs=FBgn0034914.1.path1;transcripts=FBgn0034914.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7379728	7381678	.	-	.	ID=FBgn0034914.1.mrna1;geneID=FBgn0034914.1.path1;Name=FBgn0034914.1;Dir=sensecoverage=100.0;identity=99.9;matches=698;mismatches=0;indels=1;unknowns=0;locus=RLOC_00014479
Chr2	stalkie_big_nohaplotig	exon	7379728	7379891	99	-	.	Parent=FBgn0034914.1.mrna1;Target=FBgn0034914.1 535 699 +
Chr2	stalkie_big_nohaplotig	exon	7380790	7380964	100	-	.	Parent=FBgn0034914.1.mrna1;Target=FBgn0034914.1 360 534 +
Chr2	stalkie_big_nohaplotig	exon	7381095	7381256	100	-	.	Parent=FBgn0034914.1.mrna1;Target=FBgn0034914.1 198 359 +
Chr2	stalkie_big_nohaplotig	exon	7381482	7381678	100	-	.	Parent=FBgn0034914.1.mrna1;Target=FBgn0034914.1 1 197 +
Chr2	stalkie_big_nohaplotig	CDS	7379728	7379891	.	-	0	Parent=FBgn0034914.1.mrna1;Target=FBgn0034914.1 535 699 +
Chr2	stalkie_big_nohaplotig	CDS	7380790	7380964	.	-	1	Parent=FBgn0034914.1.mrna1;Target=FBgn0034914.1 360 534 +
Chr2	stalkie_big_nohaplotig	CDS	7381095	7381256	.	-	1	Parent=FBgn0034914.1.mrna1;Target=FBgn0034914.1 198 359 +
Chr2	stalkie_big_nohaplotig	CDS	7381482	7381678	.	-	0	Parent=FBgn0034914.1.mrna1;Target=FBgn0034914.1 1 197 +
Chr2	gffcl	locus	7400522	7401860	.	-	.	ID=RLOC_00014481;geneIDs=comp159709_c0_seq1.path1;transcripts=comp159709_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7400522	7401860	.	-	.	ID=comp159709_c0_seq1.mrna1;geneID=comp159709_c0_seq1.path1;Name=comp159709_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.5;matches=1319;mismatches=20;indels=0;unknowns=0;Target=comp159709_c0_seq1 1340 2 .;CDS_Target=comp159709_c0_seq1 971 744 .;locus=RLOC_00014481
Chr2	stalkie_big_nohaplotig	exon	7400522	7401860	98	-	.	Parent=comp159709_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7400891	7401118	.	-	0	Parent=comp159709_c0_seq1.mrna1
Chr2	gffcl	locus	7465859	7475435	.	+	.	ID=RLOC_00014483;geneIDs=FBgn0050106.1.path1;transcripts=FBgn0050106.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7465859	7475435	.	+	.	ID=FBgn0050106.1.mrna1;geneID=FBgn0050106.1.path1;Name=FBgn0050106.1;Dir=sensecoverage=100.0;identity=99.7;matches=1522;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014483
Chr2	stalkie_big_nohaplotig	exon	7465859	7466337	99	+	.	Parent=FBgn0050106.1.mrna1;Target=FBgn0050106.1 1 479 +
Chr2	stalkie_big_nohaplotig	exon	7471291	7471517	100	+	.	Parent=FBgn0050106.1.mrna1;Target=FBgn0050106.1 480 706 +
Chr2	stalkie_big_nohaplotig	exon	7471670	7471773	100	+	.	Parent=FBgn0050106.1.mrna1;Target=FBgn0050106.1 707 810 +
Chr2	stalkie_big_nohaplotig	exon	7471909	7472121	99	+	.	Parent=FBgn0050106.1.mrna1;Target=FBgn0050106.1 811 1023 +
Chr2	stalkie_big_nohaplotig	exon	7473322	7473425	100	+	.	Parent=FBgn0050106.1.mrna1;Target=FBgn0050106.1 1024 1127 +
Chr2	stalkie_big_nohaplotig	exon	7473585	7473722	99	+	.	Parent=FBgn0050106.1.mrna1;Target=FBgn0050106.1 1128 1265 +
Chr2	stalkie_big_nohaplotig	exon	7475079	7475228	100	+	.	Parent=FBgn0050106.1.mrna1;Target=FBgn0050106.1 1266 1415 +
Chr2	stalkie_big_nohaplotig	exon	7475324	7475435	100	+	.	Parent=FBgn0050106.1.mrna1;Target=FBgn0050106.1 1416 1527 +
Chr2	stalkie_big_nohaplotig	CDS	7465859	7466337	.	+	0	Parent=FBgn0050106.1.mrna1;Target=FBgn0050106.1 1 479 +
Chr2	stalkie_big_nohaplotig	CDS	7471291	7471517	.	+	1	Parent=FBgn0050106.1.mrna1;Target=FBgn0050106.1 480 706 +
Chr2	stalkie_big_nohaplotig	CDS	7471670	7471773	.	+	2	Parent=FBgn0050106.1.mrna1;Target=FBgn0050106.1 707 810 +
Chr2	stalkie_big_nohaplotig	CDS	7471909	7472121	.	+	0	Parent=FBgn0050106.1.mrna1;Target=FBgn0050106.1 811 1023 +
Chr2	stalkie_big_nohaplotig	CDS	7473322	7473425	.	+	0	Parent=FBgn0050106.1.mrna1;Target=FBgn0050106.1 1024 1127 +
Chr2	stalkie_big_nohaplotig	CDS	7473585	7473722	.	+	1	Parent=FBgn0050106.1.mrna1;Target=FBgn0050106.1 1128 1265 +
Chr2	stalkie_big_nohaplotig	CDS	7475079	7475228	.	+	1	Parent=FBgn0050106.1.mrna1;Target=FBgn0050106.1 1266 1415 +
Chr2	stalkie_big_nohaplotig	CDS	7475324	7475435	.	+	1	Parent=FBgn0050106.1.mrna1;Target=FBgn0050106.1 1416 1527 +
Chr2	gffcl	locus	7477566	7556149	.	+	.	ID=RLOC_00014484;geneIDs=comp157558_c0_seq1.path1;transcripts=comp157558_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7477566	7556149	.	+	.	ID=comp157558_c0_seq1.mrna1;geneID=comp157558_c0_seq1.path1;Name=comp157558_c0_seq1;Dir=indeterminatecoverage=76.8;identity=96.0;matches=958;mismatches=3;indels=37;unknowns=0;Target=comp157558_c0_seq1 969 862 .;locus=RLOC_00014484
Chr2	stalkie_big_nohaplotig	exon	7477566	7477571	100	+	.	Parent=comp157558_c0_seq1.mrna1;Target=comp157558_c0_seq1 307 302 .
Chr2	stalkie_big_nohaplotig	exon	7491807	7491812	83	+	.	Parent=comp157558_c0_seq1.mrna1;Target=comp157558_c0_seq1 313 308 .
Chr2	stalkie_big_nohaplotig	exon	7494824	7494827	100	+	.	Parent=comp157558_c0_seq1.mrna1;Target=comp157558_c0_seq1 317 314 .
Chr2	stalkie_big_nohaplotig	exon	7502675	7502684	100	+	.	Parent=comp157558_c0_seq1.mrna1;Target=comp157558_c0_seq1 327 318 .
Chr2	stalkie_big_nohaplotig	exon	7507561	7507562	100	+	.	Parent=comp157558_c0_seq1.mrna1;Target=comp157558_c0_seq1 329 328 .
Chr2	stalkie_big_nohaplotig	exon	7514639	7514654	93	+	.	Parent=comp157558_c0_seq1.mrna1;Target=comp157558_c0_seq1 345 330 .
Chr2	stalkie_big_nohaplotig	exon	7515433	7515437	100	+	.	Parent=comp157558_c0_seq1.mrna1;Target=comp157558_c0_seq1 350 346 .
Chr2	stalkie_big_nohaplotig	exon	7518084	7518089	100	+	.	Parent=comp157558_c0_seq1.mrna1;Target=comp157558_c0_seq1 356 351 .
Chr2	stalkie_big_nohaplotig	exon	7520774	7520784	90	+	.	Parent=comp157558_c0_seq1.mrna1;Target=comp157558_c0_seq1 367 357 .
Chr2	stalkie_big_nohaplotig	exon	7542770	7542774	100	+	.	Parent=comp157558_c0_seq1.mrna1;Target=comp157558_c0_seq1 372 368 .
Chr2	stalkie_big_nohaplotig	exon	7555258	7556149	96	+	.	Parent=comp157558_c0_seq1.mrna1;Target=comp157558_c0_seq1 1297 373 .
Chr2	stalkie_big_nohaplotig	CDS	7555712	7555819	.	+	0	Parent=comp157558_c0_seq1.mrna1
Chr2	gffcl	locus	7478287	7478565	.	+	.	ID=RLOC_00014485;geneIDs=comp147230_c0_seq1.path2;transcripts=comp147230_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	7478287	7478565	.	+	.	ID=comp147230_c0_seq1.mrna2;geneID=comp147230_c0_seq1.path2;Name=comp147230_c0_seq1;Dir=indeterminatecoverage=83.3;identity=100.0;matches=279;mismatches=0;indels=0;unknowns=0;Target=comp147230_c0_seq1 335 57 .;CDS_Target=comp147230_c0_seq1 277 212 .;locus=RLOC_00014485
Chr2	stalkie_big_nohaplotig	exon	7478287	7478565	100	+	.	Parent=comp147230_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	7478442	7478507	.	+	0	Parent=comp147230_c0_seq1.mrna2
Chr2	gffcl	locus	7481204	7493023	.	-	.	ID=RLOC_00014486;geneIDs=comp84679_c0_seq1.path1;transcripts=comp84679_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7481204	7493023	.	-	.	ID=comp84679_c0_seq1.mrna1;geneID=comp84679_c0_seq1.path1;Name=comp84679_c0_seq1;Dir=sensecoverage=100.0;identity=96.6;matches=619;mismatches=21;indels=1;unknowns=0;Target=comp84679_c0_seq1 35 172 +;locus=RLOC_00014486
Chr2	stalkie_big_nohaplotig	exon	7481204	7481581	94	-	.	Parent=comp84679_c0_seq1.mrna1;Target=comp84679_c0_seq1 264 640 +
Chr2	stalkie_big_nohaplotig	exon	7485334	7485568	99	-	.	Parent=comp84679_c0_seq1.mrna1;Target=comp84679_c0_seq1 29 263 +
Chr2	stalkie_big_nohaplotig	exon	7492996	7493023	100	-	.	Parent=comp84679_c0_seq1.mrna1;Target=comp84679_c0_seq1 1 28 +
Chr2	stalkie_big_nohaplotig	CDS	7485425	7485562	.	-	0	Parent=comp84679_c0_seq1.mrna1
Chr2	gffcl	locus	7490304	7490816	.	+	.	ID=RLOC_00014487;geneIDs=comp146108_c0_seq1.path1;transcripts=comp146108_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7490304	7490816	.	+	.	ID=comp146108_c0_seq1.mrna1;geneID=comp146108_c0_seq1.path1;Name=comp146108_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=510;mismatches=3;indels=0;unknowns=0;Target=comp146108_c0_seq1 513 1 .;CDS_Target=comp146108_c0_seq1 457 386 .;locus=RLOC_00014487
Chr2	stalkie_big_nohaplotig	exon	7490304	7490816	99	+	.	Parent=comp146108_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7490689	7490760	.	+	0	Parent=comp146108_c0_seq1.mrna1
Chr2	gffcl	locus	7504027	7507972	.	+	.	ID=RLOC_00014488;geneIDs=FBgn0034602.1.path1;transcripts=FBgn0034602.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7504027	7507972	.	+	.	ID=FBgn0034602.1.mrna1;geneID=FBgn0034602.1.path1;Name=FBgn0034602.1;Dir=sensecoverage=97.0;identity=99.8;matches=1046;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014488
Chr2	stalkie_big_nohaplotig	exon	7504027	7504216	100	+	.	Parent=FBgn0034602.1.mrna1;Target=FBgn0034602.1 33 222 +
Chr2	stalkie_big_nohaplotig	exon	7505588	7505731	99	+	.	Parent=FBgn0034602.1.mrna1;Target=FBgn0034602.1 223 366 +
Chr2	stalkie_big_nohaplotig	exon	7505874	7505993	100	+	.	Parent=FBgn0034602.1.mrna1;Target=FBgn0034602.1 367 486 +
Chr2	stalkie_big_nohaplotig	exon	7506070	7506160	98	+	.	Parent=FBgn0034602.1.mrna1;Target=FBgn0034602.1 487 577 +
Chr2	stalkie_big_nohaplotig	exon	7506220	7506405	100	+	.	Parent=FBgn0034602.1.mrna1;Target=FBgn0034602.1 578 763 +
Chr2	stalkie_big_nohaplotig	exon	7507582	7507737	100	+	.	Parent=FBgn0034602.1.mrna1;Target=FBgn0034602.1 764 919 +
Chr2	stalkie_big_nohaplotig	exon	7507812	7507972	100	+	.	Parent=FBgn0034602.1.mrna1;Target=FBgn0034602.1 920 1080 +
Chr2	stalkie_big_nohaplotig	CDS	7504028	7504216	.	+	0	Parent=FBgn0034602.1.mrna1;Target=FBgn0034602.1 34 222 +
Chr2	stalkie_big_nohaplotig	CDS	7505588	7505731	.	+	0	Parent=FBgn0034602.1.mrna1;Target=FBgn0034602.1 223 366 +
Chr2	stalkie_big_nohaplotig	CDS	7505874	7505993	.	+	0	Parent=FBgn0034602.1.mrna1;Target=FBgn0034602.1 367 486 +
Chr2	stalkie_big_nohaplotig	CDS	7506070	7506160	.	+	0	Parent=FBgn0034602.1.mrna1;Target=FBgn0034602.1 487 577 +
Chr2	stalkie_big_nohaplotig	CDS	7506220	7506405	.	+	2	Parent=FBgn0034602.1.mrna1;Target=FBgn0034602.1 578 763 +
Chr2	stalkie_big_nohaplotig	CDS	7507582	7507737	.	+	2	Parent=FBgn0034602.1.mrna1;Target=FBgn0034602.1 764 919 +
Chr2	stalkie_big_nohaplotig	CDS	7507812	7507972	.	+	2	Parent=FBgn0034602.1.mrna1;Target=FBgn0034602.1 920 1080 +
Chr2	gffcl	locus	7511715	7514906	.	-	.	ID=RLOC_00014489;geneIDs=FBgn0010052.1.path1;transcripts=FBgn0010052.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7511715	7514906	.	-	.	ID=FBgn0010052.1.mrna1;geneID=FBgn0010052.1.path1;Name=FBgn0010052.1;Dir=sensecoverage=100.0;identity=99.9;matches=1813;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014489
Chr2	stalkie_big_nohaplotig	exon	7511715	7511955	100	-	.	Parent=FBgn0010052.1.mrna1;Target=FBgn0010052.1 1575 1815 +
Chr2	stalkie_big_nohaplotig	exon	7512027	7512325	100	-	.	Parent=FBgn0010052.1.mrna1;Target=FBgn0010052.1 1276 1574 +
Chr2	stalkie_big_nohaplotig	exon	7512410	7512966	100	-	.	Parent=FBgn0010052.1.mrna1;Target=FBgn0010052.1 719 1275 +
Chr2	stalkie_big_nohaplotig	exon	7513029	7513214	100	-	.	Parent=FBgn0010052.1.mrna1;Target=FBgn0010052.1 533 718 +
Chr2	stalkie_big_nohaplotig	exon	7513292	7513442	100	-	.	Parent=FBgn0010052.1.mrna1;Target=FBgn0010052.1 382 532 +
Chr2	stalkie_big_nohaplotig	exon	7514429	7514572	98	-	.	Parent=FBgn0010052.1.mrna1;Target=FBgn0010052.1 238 381 +
Chr2	stalkie_big_nohaplotig	exon	7514670	7514906	100	-	.	Parent=FBgn0010052.1.mrna1;Target=FBgn0010052.1 1 237 +
Chr2	stalkie_big_nohaplotig	CDS	7511715	7511955	.	-	1	Parent=FBgn0010052.1.mrna1;Target=FBgn0010052.1 1575 1815 +
Chr2	stalkie_big_nohaplotig	CDS	7512027	7512325	.	-	0	Parent=FBgn0010052.1.mrna1;Target=FBgn0010052.1 1276 1574 +
Chr2	stalkie_big_nohaplotig	CDS	7512410	7512966	.	-	2	Parent=FBgn0010052.1.mrna1;Target=FBgn0010052.1 719 1275 +
Chr2	stalkie_big_nohaplotig	CDS	7513029	7513214	.	-	2	Parent=FBgn0010052.1.mrna1;Target=FBgn0010052.1 533 718 +
Chr2	stalkie_big_nohaplotig	CDS	7513292	7513442	.	-	0	Parent=FBgn0010052.1.mrna1;Target=FBgn0010052.1 382 532 +
Chr2	stalkie_big_nohaplotig	CDS	7514429	7514572	.	-	0	Parent=FBgn0010052.1.mrna1;Target=FBgn0010052.1 238 381 +
Chr2	stalkie_big_nohaplotig	CDS	7514670	7514906	.	-	0	Parent=FBgn0010052.1.mrna1;Target=FBgn0010052.1 1 237 +
Chr2	gffcl	locus	7534132	7534584	.	-	.	ID=RLOC_00014490;geneIDs=comp564612_c0_seq1.path1;transcripts=comp564612_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7534132	7534584	.	-	.	ID=comp564612_c0_seq1.mrna1;geneID=comp564612_c0_seq1.path1;Name=comp564612_c0_seq1;Dir=sensecoverage=96.1;identity=99.0;matches=390;mismatches=4;indels=0;unknowns=0;locus=RLOC_00014490
Chr2	stalkie_big_nohaplotig	exon	7534132	7534329	98	-	.	Parent=comp564612_c0_seq1.mrna1;Target=comp564612_c0_seq1 197 394 +
Chr2	stalkie_big_nohaplotig	exon	7534389	7534584	98	-	.	Parent=comp564612_c0_seq1.mrna1;Target=comp564612_c0_seq1 1 196 +
Chr2	stalkie_big_nohaplotig	CDS	7534199	7534329	.	-	2	Parent=comp564612_c0_seq1.mrna1;Target=comp564612_c0_seq1 197 327 +
Chr2	stalkie_big_nohaplotig	CDS	7534389	7534584	.	-	0	Parent=comp564612_c0_seq1.mrna1;Target=comp564612_c0_seq1 1 196 +
Chr2	gffcl	locus	7536234	7536756	.	+	.	ID=RLOC_00014491;geneIDs=comp146368_c0_seq1.path1;transcripts=comp146368_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7536234	7536756	.	+	.	ID=comp146368_c0_seq1.mrna1;geneID=comp146368_c0_seq1.path1;Name=comp146368_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=523;mismatches=0;indels=0;unknowns=0;Target=comp146368_c0_seq1 523 1 .;CDS_Target=comp146368_c0_seq1 56 3 .;locus=RLOC_00014491
Chr2	stalkie_big_nohaplotig	exon	7536234	7536756	100	+	.	Parent=comp146368_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7536236	7536289	.	+	0	Parent=comp146368_c0_seq1.mrna1
Chr2	gffcl	locus	7537009	7551542	.	.	.	ID=RLOC_00014492;geneIDs=FBgn0034075.1.path1,comp961070_c0_seq1.path1;transcripts=FBgn0034075.1.mrna1,comp961070_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7537009	7551542	.	-	.	ID=FBgn0034075.1.mrna1;geneID=FBgn0034075.1.path1;Name=FBgn0034075.1;Dir=sensecoverage=100.0;identity=99.5;matches=3434;mismatches=10;indels=6;unknowns=0;locus=RLOC_00014492
Chr2	stalkie_big_nohaplotig	exon	7537009	7537156	100	-	.	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 3297 3444 +
Chr2	stalkie_big_nohaplotig	exon	7537226	7537945	99	-	.	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 2577 3296 +
Chr2	stalkie_big_nohaplotig	exon	7538014	7538119	100	-	.	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 2471 2576 +
Chr2	stalkie_big_nohaplotig	exon	7538280	7538520	100	-	.	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 2230 2470 +
Chr2	stalkie_big_nohaplotig	exon	7539916	7540052	100	-	.	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 2093 2229 +
Chr2	stalkie_big_nohaplotig	exon	7540471	7541229	99	-	.	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 1334 2092 +
Chr2	stalkie_big_nohaplotig	exon	7542691	7542795	100	-	.	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 1229 1333 +
Chr2	stalkie_big_nohaplotig	exon	7543372	7543449	100	-	.	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 1151 1228 +
Chr2	stalkie_big_nohaplotig	exon	7543799	7543973	100	-	.	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 976 1150 +
Chr2	stalkie_big_nohaplotig	exon	7544800	7545485	98	-	.	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 296 975 +
Chr2	stalkie_big_nohaplotig	exon	7545546	7545731	100	-	.	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 110 295 +
Chr2	stalkie_big_nohaplotig	exon	7545868	7545921	100	-	.	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 56 109 +
Chr2	stalkie_big_nohaplotig	exon	7551488	7551542	100	-	.	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 1 55 +
Chr2	stalkie_big_nohaplotig	CDS	7537009	7537156	.	-	1	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 3297 3444 +
Chr2	stalkie_big_nohaplotig	CDS	7537226	7537945	.	-	1	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 2577 3296 +
Chr2	stalkie_big_nohaplotig	CDS	7538014	7538119	.	-	2	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 2471 2576 +
Chr2	stalkie_big_nohaplotig	CDS	7538280	7538520	.	-	0	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 2230 2470 +
Chr2	stalkie_big_nohaplotig	CDS	7539916	7540052	.	-	2	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 2093 2229 +
Chr2	stalkie_big_nohaplotig	CDS	7540471	7541229	.	-	2	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 1334 2092 +
Chr2	stalkie_big_nohaplotig	CDS	7542691	7542795	.	-	2	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 1229 1333 +
Chr2	stalkie_big_nohaplotig	CDS	7543372	7543449	.	-	2	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 1151 1228 +
Chr2	stalkie_big_nohaplotig	CDS	7543799	7543973	.	-	0	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 976 1150 +
Chr2	stalkie_big_nohaplotig	CDS	7544800	7545485	.	-	2	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 296 975 +
Chr2	stalkie_big_nohaplotig	CDS	7545546	7545731	.	-	2	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 110 295 +
Chr2	stalkie_big_nohaplotig	CDS	7545868	7545921	.	-	2	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 56 109 +
Chr2	stalkie_big_nohaplotig	CDS	7551488	7551542	.	-	0	Parent=FBgn0034075.1.mrna1;Target=FBgn0034075.1 1 55 +
Chr2	stalkie_big_nohaplotig	mRNA	7545899	7546443	.	+	.	ID=comp961070_c0_seq1.mrna1;geneID=comp961070_c0_seq1.path1;Name=comp961070_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=545;mismatches=0;indels=0;unknowns=0;Target=comp961070_c0_seq1 545 1 .;CDS_Target=comp961070_c0_seq1 413 336 .;locus=RLOC_00014492
Chr2	stalkie_big_nohaplotig	exon	7545899	7546443	100	+	.	Parent=comp961070_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7546234	7546311	.	+	0	Parent=comp961070_c0_seq1.mrna1
Chr2	gffcl	locus	7553595	7554659	.	+	.	ID=RLOC_00014493;geneIDs=FBgn0033100.1.path1;transcripts=FBgn0033100.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7553595	7554659	.	+	.	ID=FBgn0033100.1.mrna1;geneID=FBgn0033100.1.path1;Name=FBgn0033100.1;Dir=sensecoverage=100.0;identity=100.0;matches=411;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014493
Chr2	stalkie_big_nohaplotig	exon	7553595	7553645	100	+	.	Parent=FBgn0033100.1.mrna1;Target=FBgn0033100.1 1 51 +
Chr2	stalkie_big_nohaplotig	exon	7553719	7553860	100	+	.	Parent=FBgn0033100.1.mrna1;Target=FBgn0033100.1 52 193 +
Chr2	stalkie_big_nohaplotig	exon	7554379	7554472	100	+	.	Parent=FBgn0033100.1.mrna1;Target=FBgn0033100.1 194 287 +
Chr2	stalkie_big_nohaplotig	exon	7554536	7554659	100	+	.	Parent=FBgn0033100.1.mrna1;Target=FBgn0033100.1 288 411 +
Chr2	stalkie_big_nohaplotig	CDS	7553595	7553645	.	+	0	Parent=FBgn0033100.1.mrna1;Target=FBgn0033100.1 1 51 +
Chr2	stalkie_big_nohaplotig	CDS	7553719	7553860	.	+	0	Parent=FBgn0033100.1.mrna1;Target=FBgn0033100.1 52 193 +
Chr2	stalkie_big_nohaplotig	CDS	7554379	7554472	.	+	2	Parent=FBgn0033100.1.mrna1;Target=FBgn0033100.1 194 287 +
Chr2	stalkie_big_nohaplotig	CDS	7554536	7554659	.	+	1	Parent=FBgn0033100.1.mrna1;Target=FBgn0033100.1 288 411 +
Chr2	gffcl	locus	7556600	7557018	.	+	.	ID=RLOC_00014494;geneIDs=comp151114_c0_seq1.path1;transcripts=comp151114_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7556600	7557018	.	+	.	ID=comp151114_c0_seq1.mrna1;geneID=comp151114_c0_seq1.path1;Name=comp151114_c0_seq1;Dir=indeterminatecoverage=94.6;identity=98.8;matches=414;mismatches=5;indels=0;unknowns=0;Target=comp151114_c0_seq1 443 25 .;CDS_Target=comp151114_c0_seq1 245 165 .;locus=RLOC_00014494
Chr2	stalkie_big_nohaplotig	exon	7556600	7557018	98	+	.	Parent=comp151114_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7556740	7556820	.	+	0	Parent=comp151114_c0_seq1.mrna1
Chr2	gffcl	locus	7558159	7563934	.	.	.	ID=RLOC_00014495;geneIDs=FBgn0027066.2.path1,comp118877_c0_seq1.path1;transcripts=FBgn0027066.2.mrna1,comp118877_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7558159	7563934	.	-	.	ID=FBgn0027066.2.mrna1;geneID=FBgn0027066.2.path1;Name=FBgn0027066.2;Dir=sensecoverage=100.0;identity=99.9;matches=896;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014495
Chr2	stalkie_big_nohaplotig	exon	7558159	7558206	100	-	.	Parent=FBgn0027066.2.mrna1;Target=FBgn0027066.2 850 897 +
Chr2	stalkie_big_nohaplotig	exon	7559248	7559320	100	-	.	Parent=FBgn0027066.2.mrna1;Target=FBgn0027066.2 777 849 +
Chr2	stalkie_big_nohaplotig	exon	7559445	7559527	100	-	.	Parent=FBgn0027066.2.mrna1;Target=FBgn0027066.2 694 776 +
Chr2	stalkie_big_nohaplotig	exon	7559648	7559799	100	-	.	Parent=FBgn0027066.2.mrna1;Target=FBgn0027066.2 542 693 +
Chr2	stalkie_big_nohaplotig	exon	7560225	7560489	99	-	.	Parent=FBgn0027066.2.mrna1;Target=FBgn0027066.2 277 541 +
Chr2	stalkie_big_nohaplotig	exon	7563590	7563735	100	-	.	Parent=FBgn0027066.2.mrna1;Target=FBgn0027066.2 131 276 +
Chr2	stalkie_big_nohaplotig	exon	7563805	7563934	100	-	.	Parent=FBgn0027066.2.mrna1;Target=FBgn0027066.2 1 130 +
Chr2	stalkie_big_nohaplotig	CDS	7558159	7558206	.	-	0	Parent=FBgn0027066.2.mrna1;Target=FBgn0027066.2 850 897 +
Chr2	stalkie_big_nohaplotig	CDS	7559248	7559320	.	-	1	Parent=FBgn0027066.2.mrna1;Target=FBgn0027066.2 777 849 +
Chr2	stalkie_big_nohaplotig	CDS	7559445	7559527	.	-	0	Parent=FBgn0027066.2.mrna1;Target=FBgn0027066.2 694 776 +
Chr2	stalkie_big_nohaplotig	CDS	7559648	7559799	.	-	2	Parent=FBgn0027066.2.mrna1;Target=FBgn0027066.2 542 693 +
Chr2	stalkie_big_nohaplotig	CDS	7560225	7560489	.	-	0	Parent=FBgn0027066.2.mrna1;Target=FBgn0027066.2 277 541 +
Chr2	stalkie_big_nohaplotig	CDS	7563590	7563735	.	-	2	Parent=FBgn0027066.2.mrna1;Target=FBgn0027066.2 131 276 +
Chr2	stalkie_big_nohaplotig	CDS	7563805	7563934	.	-	0	Parent=FBgn0027066.2.mrna1;Target=FBgn0027066.2 1 130 +
Chr2	stalkie_big_nohaplotig	mRNA	7558186	7558560	.	+	.	ID=comp118877_c0_seq1.mrna1;geneID=comp118877_c0_seq1.path1;Name=comp118877_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=372;mismatches=3;indels=3;unknowns=0;Target=comp118877_c0_seq1 378 1 .;CDS_Target=comp118877_c0_seq1 274 131 .;locus=RLOC_00014495
Chr2	stalkie_big_nohaplotig	exon	7558186	7558560	98	+	.	Parent=comp118877_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7558313	7558456	.	+	0	Parent=comp118877_c0_seq1.mrna1
Chr2	gffcl	locus	7573676	7588251	.	-	.	ID=RLOC_00014496;geneIDs=FBgn0042083.1.path1;transcripts=FBgn0042083.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7573676	7588251	.	-	.	ID=FBgn0042083.1.mrna1;geneID=FBgn0042083.1.path1;Name=FBgn0042083.1;Dir=sensecoverage=100.0;identity=99.8;matches=1830;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014496
Chr2	stalkie_big_nohaplotig	exon	7573676	7574013	100	-	.	Parent=FBgn0042083.1.mrna1;Target=FBgn0042083.1 1496 1833 +
Chr2	stalkie_big_nohaplotig	exon	7574089	7574223	100	-	.	Parent=FBgn0042083.1.mrna1;Target=FBgn0042083.1 1361 1495 +
Chr2	stalkie_big_nohaplotig	exon	7585992	7586878	99	-	.	Parent=FBgn0042083.1.mrna1;Target=FBgn0042083.1 474 1360 +
Chr2	stalkie_big_nohaplotig	exon	7586938	7587121	100	-	.	Parent=FBgn0042083.1.mrna1;Target=FBgn0042083.1 290 473 +
Chr2	stalkie_big_nohaplotig	exon	7587828	7587897	100	-	.	Parent=FBgn0042083.1.mrna1;Target=FBgn0042083.1 220 289 +
Chr2	stalkie_big_nohaplotig	exon	7587959	7588102	100	-	.	Parent=FBgn0042083.1.mrna1;Target=FBgn0042083.1 76 219 +
Chr2	stalkie_big_nohaplotig	exon	7588177	7588251	100	-	.	Parent=FBgn0042083.1.mrna1;Target=FBgn0042083.1 1 75 +
Chr2	stalkie_big_nohaplotig	CDS	7573676	7574013	.	-	2	Parent=FBgn0042083.1.mrna1;Target=FBgn0042083.1 1496 1833 +
Chr2	stalkie_big_nohaplotig	CDS	7574089	7574223	.	-	2	Parent=FBgn0042083.1.mrna1;Target=FBgn0042083.1 1361 1495 +
Chr2	stalkie_big_nohaplotig	CDS	7585992	7586878	.	-	1	Parent=FBgn0042083.1.mrna1;Target=FBgn0042083.1 474 1360 +
Chr2	stalkie_big_nohaplotig	CDS	7586938	7587121	.	-	2	Parent=FBgn0042083.1.mrna1;Target=FBgn0042083.1 290 473 +
Chr2	stalkie_big_nohaplotig	CDS	7587828	7587897	.	-	0	Parent=FBgn0042083.1.mrna1;Target=FBgn0042083.1 220 289 +
Chr2	stalkie_big_nohaplotig	CDS	7587959	7588102	.	-	0	Parent=FBgn0042083.1.mrna1;Target=FBgn0042083.1 76 219 +
Chr2	stalkie_big_nohaplotig	CDS	7588177	7588251	.	-	0	Parent=FBgn0042083.1.mrna1;Target=FBgn0042083.1 1 75 +
Chr2	gffcl	locus	7589410	7590036	.	+	.	ID=RLOC_00014497;geneIDs=comp164257_c0_seq1.path1;transcripts=comp164257_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7589410	7590036	.	+	.	ID=comp164257_c0_seq1.mrna1;geneID=comp164257_c0_seq1.path1;Name=comp164257_c0_seq1;Dir=antisensecoverage=97.1;identity=100.0;matches=533;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014497
Chr2	stalkie_big_nohaplotig	exon	7589410	7589690	100	+	.	Parent=comp164257_c0_seq1.mrna1;Target=comp164257_c0_seq1 269 549 -
Chr2	stalkie_big_nohaplotig	exon	7589785	7590036	100	+	.	Parent=comp164257_c0_seq1.mrna1;Target=comp164257_c0_seq1 17 268 -
Chr2	stalkie_big_nohaplotig	CDS	7589607	7589690	.	+	0	Parent=comp164257_c0_seq1.mrna1;Target=comp164257_c0_seq1 269 352 .
Chr2	stalkie_big_nohaplotig	CDS	7589785	7589901	.	+	0	Parent=comp164257_c0_seq1.mrna1;Target=comp164257_c0_seq1 152 268 .
Chr2	gffcl	locus	7591272	7592044	.	-	.	ID=RLOC_00014498;geneIDs=FBgn0263260.1.path1;transcripts=FBgn0263260.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7591272	7592044	.	-	.	ID=FBgn0263260.1.mrna1;geneID=FBgn0263260.1.path1;Name=FBgn0263260.1;Dir=sensecoverage=100.0;identity=100.0;matches=603;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014498
Chr2	stalkie_big_nohaplotig	exon	7591272	7591436	100	-	.	Parent=FBgn0263260.1.mrna1;Target=FBgn0263260.1 439 603 +
Chr2	stalkie_big_nohaplotig	exon	7591492	7591643	100	-	.	Parent=FBgn0263260.1.mrna1;Target=FBgn0263260.1 287 438 +
Chr2	stalkie_big_nohaplotig	exon	7591702	7591869	100	-	.	Parent=FBgn0263260.1.mrna1;Target=FBgn0263260.1 119 286 +
Chr2	stalkie_big_nohaplotig	exon	7591927	7592044	100	-	.	Parent=FBgn0263260.1.mrna1;Target=FBgn0263260.1 1 118 +
Chr2	stalkie_big_nohaplotig	CDS	7591272	7591436	.	-	0	Parent=FBgn0263260.1.mrna1;Target=FBgn0263260.1 439 603 +
Chr2	stalkie_big_nohaplotig	CDS	7591492	7591643	.	-	2	Parent=FBgn0263260.1.mrna1;Target=FBgn0263260.1 287 438 +
Chr2	stalkie_big_nohaplotig	CDS	7591702	7591869	.	-	2	Parent=FBgn0263260.1.mrna1;Target=FBgn0263260.1 119 286 +
Chr2	stalkie_big_nohaplotig	CDS	7591927	7592044	.	-	0	Parent=FBgn0263260.1.mrna1;Target=FBgn0263260.1 1 118 +
Chr2	gffcl	locus	7598040	7598674	.	-	.	ID=RLOC_00014499;geneIDs=comp62761_c0_seq1.path1;transcripts=comp62761_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7598040	7598674	.	-	.	ID=comp62761_c0_seq1.mrna1;geneID=comp62761_c0_seq1.path1;Name=comp62761_c0_seq1;Dir=indeterminatecoverage=95.6;identity=99.7;matches=635;mismatches=0;indels=2;unknowns=0;Target=comp62761_c0_seq1 637 1 .;CDS_Target=comp62761_c0_seq1 345 262 .;locus=RLOC_00014499
Chr2	stalkie_big_nohaplotig	exon	7598040	7598674	99	-	.	Parent=comp62761_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7598332	7598415	.	-	0	Parent=comp62761_c0_seq1.mrna1
Chr2	gffcl	locus	7599350	7599908	.	+	.	ID=RLOC_00014500;geneIDs=comp47663_c0_seq1.path1;transcripts=comp47663_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7599350	7599908	.	+	.	ID=comp47663_c0_seq1.mrna1;geneID=comp47663_c0_seq1.path1;Name=comp47663_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=559;mismatches=0;indels=0;unknowns=0;Target=comp47663_c0_seq1 559 1 .;CDS_Target=comp47663_c0_seq1 419 279 .;locus=RLOC_00014500
Chr2	stalkie_big_nohaplotig	exon	7599350	7599908	100	+	.	Parent=comp47663_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7599628	7599768	.	+	0	Parent=comp47663_c0_seq1.mrna1
Chr2	gffcl	locus	7607867	7620099	.	+	.	ID=RLOC_00014501;geneIDs=FBgn0022764.1.path1;transcripts=FBgn0022764.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7607867	7620099	.	+	.	ID=FBgn0022764.1.mrna1;geneID=FBgn0022764.1.path1;Name=FBgn0022764.1;Dir=sensecoverage=100.0;identity=99.9;matches=6080;mismatches=4;indels=0;unknowns=0;locus=RLOC_00014501
Chr2	stalkie_big_nohaplotig	exon	7607867	7608287	100	+	.	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 1 421 +
Chr2	stalkie_big_nohaplotig	exon	7608658	7609817	99	+	.	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 422 1581 +
Chr2	stalkie_big_nohaplotig	exon	7609880	7611378	100	+	.	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 1582 3080 +
Chr2	stalkie_big_nohaplotig	exon	7611489	7611801	100	+	.	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 3081 3393 +
Chr2	stalkie_big_nohaplotig	exon	7611859	7612002	99	+	.	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 3394 3537 +
Chr2	stalkie_big_nohaplotig	exon	7612058	7612292	100	+	.	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 3538 3772 +
Chr2	stalkie_big_nohaplotig	exon	7612665	7613305	99	+	.	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 3773 4413 +
Chr2	stalkie_big_nohaplotig	exon	7613380	7613709	100	+	.	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 4414 4743 +
Chr2	stalkie_big_nohaplotig	exon	7613780	7613986	100	+	.	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 4744 4950 +
Chr2	stalkie_big_nohaplotig	exon	7614482	7614718	100	+	.	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 4951 5187 +
Chr2	stalkie_big_nohaplotig	exon	7617920	7618393	100	+	.	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 5188 5661 +
Chr2	stalkie_big_nohaplotig	exon	7619677	7620099	100	+	.	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 5662 6084 +
Chr2	stalkie_big_nohaplotig	CDS	7607867	7608287	.	+	0	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 1 421 +
Chr2	stalkie_big_nohaplotig	CDS	7608658	7609817	.	+	2	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 422 1581 +
Chr2	stalkie_big_nohaplotig	CDS	7609880	7611378	.	+	0	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 1582 3080 +
Chr2	stalkie_big_nohaplotig	CDS	7611489	7611801	.	+	1	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 3081 3393 +
Chr2	stalkie_big_nohaplotig	CDS	7611859	7612002	.	+	0	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 3394 3537 +
Chr2	stalkie_big_nohaplotig	CDS	7612058	7612292	.	+	0	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 3538 3772 +
Chr2	stalkie_big_nohaplotig	CDS	7612665	7613305	.	+	2	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 3773 4413 +
Chr2	stalkie_big_nohaplotig	CDS	7613380	7613709	.	+	0	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 4414 4743 +
Chr2	stalkie_big_nohaplotig	CDS	7613780	7613986	.	+	0	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 4744 4950 +
Chr2	stalkie_big_nohaplotig	CDS	7614482	7614718	.	+	0	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 4951 5187 +
Chr2	stalkie_big_nohaplotig	CDS	7617920	7618393	.	+	0	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 5188 5661 +
Chr2	stalkie_big_nohaplotig	CDS	7619677	7620099	.	+	0	Parent=FBgn0022764.1.mrna1;Target=FBgn0022764.1 5662 6084 +
Chr2	stalkie_big_nohaplotig	mRNA	7631655	7633574	.	-	.	ID=FBgn0050291.1.mrna1;geneID=FBgn0050291.1.path1;Name=FBgn0050291.1;Dir=sensecoverage=100.0;identity=99.7;matches=1750;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014502
Chr2	stalkie_big_nohaplotig	exon	7631655	7632154	100	-	.	Parent=FBgn0050291.1.mrna1;Target=FBgn0050291.1 1256 1755 +
Chr2	stalkie_big_nohaplotig	exon	7632215	7633078	99	-	.	Parent=FBgn0050291.1.mrna1;Target=FBgn0050291.1 392 1255 +
Chr2	stalkie_big_nohaplotig	exon	7633134	7633308	100	-	.	Parent=FBgn0050291.1.mrna1;Target=FBgn0050291.1 217 391 +
Chr2	stalkie_big_nohaplotig	exon	7633359	7633574	100	-	.	Parent=FBgn0050291.1.mrna1;Target=FBgn0050291.1 1 216 +
Chr2	stalkie_big_nohaplotig	CDS	7631655	7632154	.	-	2	Parent=FBgn0050291.1.mrna1;Target=FBgn0050291.1 1256 1755 +
Chr2	stalkie_big_nohaplotig	CDS	7632215	7633078	.	-	2	Parent=FBgn0050291.1.mrna1;Target=FBgn0050291.1 392 1255 +
Chr2	stalkie_big_nohaplotig	CDS	7633134	7633308	.	-	0	Parent=FBgn0050291.1.mrna1;Target=FBgn0050291.1 217 391 +
Chr2	stalkie_big_nohaplotig	CDS	7633359	7633574	.	-	0	Parent=FBgn0050291.1.mrna1;Target=FBgn0050291.1 1 216 +
Chr2	gffcl	locus	7636652	7638431	.	+	.	ID=RLOC_00014503;geneIDs=FBgn0034269.1.path1;transcripts=FBgn0034269.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7636652	7638431	.	+	.	ID=FBgn0034269.1.mrna1;geneID=FBgn0034269.1.path1;Name=FBgn0034269.1;Dir=sensecoverage=100.0;identity=99.8;matches=1716;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014503
Chr2	stalkie_big_nohaplotig	exon	7636652	7637394	99	+	.	Parent=FBgn0034269.1.mrna1;Target=FBgn0034269.1 1 743 +
Chr2	stalkie_big_nohaplotig	exon	7637456	7638431	99	+	.	Parent=FBgn0034269.1.mrna1;Target=FBgn0034269.1 744 1719 +
Chr2	stalkie_big_nohaplotig	CDS	7636652	7637394	.	+	0	Parent=FBgn0034269.1.mrna1;Target=FBgn0034269.1 1 743 +
Chr2	stalkie_big_nohaplotig	CDS	7637456	7638431	.	+	1	Parent=FBgn0034269.1.mrna1;Target=FBgn0034269.1 744 1719 +
Chr2	gffcl	locus	7639082	7639996	.	-	.	ID=RLOC_00014504;geneIDs=FBgn0085224.1.path1;transcripts=FBgn0085224.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7639082	7639996	.	-	.	ID=FBgn0085224.1.mrna1;geneID=FBgn0085224.1.path1;Name=FBgn0085224.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=911;mismatches=4;indels=0;unknowns=0;Target=FBgn0085224.1 915 1 .;locus=RLOC_00014504
Chr2	stalkie_big_nohaplotig	exon	7639082	7639996	99	-	.	Parent=FBgn0085224.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7639082	7639996	.	-	0	Parent=FBgn0085224.1.mrna1
Chr2	gffcl	locus	7641356	7641963	.	+	.	ID=RLOC_00014505;geneIDs=FBgn0026316.2.path1;transcripts=FBgn0026316.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7641356	7641963	.	+	.	ID=FBgn0026316.2.mrna1;geneID=FBgn0026316.2.path1;Name=FBgn0026316.2;Dir=sensecoverage=100.0;identity=99.8;matches=500;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014505
Chr2	stalkie_big_nohaplotig	exon	7641356	7641379	100	+	.	Parent=FBgn0026316.2.mrna1;Target=FBgn0026316.2 1 24 +
Chr2	stalkie_big_nohaplotig	exon	7641487	7641963	99	+	.	Parent=FBgn0026316.2.mrna1;Target=FBgn0026316.2 25 501 +
Chr2	stalkie_big_nohaplotig	CDS	7641356	7641379	.	+	0	Parent=FBgn0026316.2.mrna1;Target=FBgn0026316.2 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	7641487	7641963	.	+	0	Parent=FBgn0026316.2.mrna1;Target=FBgn0026316.2 25 501 +
Chr2	gffcl	locus	7642362	7644507	.	-	.	ID=RLOC_00014506;geneIDs=FBgn0026309.1.path1;transcripts=FBgn0026309.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7642362	7644507	.	-	.	ID=FBgn0026309.1.mrna1;geneID=FBgn0026309.1.path1;Name=FBgn0026309.1;Dir=sensecoverage=100.0;identity=99.7;matches=2081;mismatches=7;indels=0;unknowns=0;locus=RLOC_00014506
Chr2	stalkie_big_nohaplotig	exon	7642362	7643918	99	-	.	Parent=FBgn0026309.1.mrna1;Target=FBgn0026309.1 532 2088 +
Chr2	stalkie_big_nohaplotig	exon	7643977	7644507	99	-	.	Parent=FBgn0026309.1.mrna1;Target=FBgn0026309.1 1 531 +
Chr2	stalkie_big_nohaplotig	CDS	7642362	7643918	.	-	0	Parent=FBgn0026309.1.mrna1;Target=FBgn0026309.1 532 2088 +
Chr2	stalkie_big_nohaplotig	CDS	7643977	7644507	.	-	0	Parent=FBgn0026309.1.mrna1;Target=FBgn0026309.1 1 531 +
Chr2	gffcl	locus	7651933	7653004	.	+	.	ID=RLOC_00014507;geneIDs=comp149975_c2_seq1.path1;transcripts=comp149975_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7651933	7653004	.	+	.	ID=comp149975_c2_seq1.mrna1;geneID=comp149975_c2_seq1.path1;Name=comp149975_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1068;mismatches=2;indels=3;unknowns=0;Target=comp149975_c2_seq1 1071 1 .;CDS_Target=comp149975_c2_seq1 618 487 .;locus=RLOC_00014507
Chr2	stalkie_big_nohaplotig	exon	7651933	7653004	99	+	.	Parent=comp149975_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7652420	7652551	.	+	0	Parent=comp149975_c2_seq1.mrna1
Chr2	gffcl	locus	7654621	7655079	.	+	.	ID=RLOC_00014508;geneIDs=comp91045_c0_seq1.path1;transcripts=comp91045_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7654621	7655079	.	+	.	ID=comp91045_c0_seq1.mrna1;geneID=comp91045_c0_seq1.path1;Name=comp91045_c0_seq1;Dir=indeterminatecoverage=98.7;identity=100.0;matches=459;mismatches=0;indels=0;unknowns=0;Target=comp91045_c0_seq1 459 1 .;CDS_Target=comp91045_c0_seq1 202 116 .;locus=RLOC_00014508
Chr2	stalkie_big_nohaplotig	exon	7654621	7655079	100	+	.	Parent=comp91045_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7654736	7654822	.	+	0	Parent=comp91045_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7718751	8655936	.	+	.	ID=FBgn0085400.mrna2;geneID=FBgn0085400.path2;Name=FBgn0085400;Dir=sensecoverage=79.1;identity=98.6;matches=1282;mismatches=9;indels=9;unknowns=0;locus=RLOC_00014509
Chr2	stalkie_big_nohaplotig	exon	7718751	7718757	100	+	.	Parent=FBgn0085400.mrna2;Target=FBgn0085400 426 432 +
Chr2	stalkie_big_nohaplotig	exon	8584702	8584732	63	+	.	Parent=FBgn0085400.mrna2;Target=FBgn0085400 699 734 +
Chr2	stalkie_big_nohaplotig	exon	8597497	8597502	100	+	.	Parent=FBgn0085400.mrna2;Target=FBgn0085400 777 782 +
Chr2	stalkie_big_nohaplotig	exon	8613208	8613210	100	+	.	Parent=FBgn0085400.mrna2;Target=FBgn0085400 783 785 +
Chr2	stalkie_big_nohaplotig	exon	8619071	8619080	100	+	.	Parent=FBgn0085400.mrna2;Target=FBgn0085400 786 795 +
Chr2	stalkie_big_nohaplotig	exon	8630745	8630751	100	+	.	Parent=FBgn0085400.mrna2;Target=FBgn0085400 800 806 +
Chr2	stalkie_big_nohaplotig	exon	8631938	8631939	100	+	.	Parent=FBgn0085400.mrna2;Target=FBgn0085400 807 808 +
Chr2	stalkie_big_nohaplotig	exon	8647821	8647972	100	+	.	Parent=FBgn0085400.mrna2;Target=FBgn0085400 809 960 +
Chr2	stalkie_big_nohaplotig	exon	8648546	8648744	99	+	.	Parent=FBgn0085400.mrna2;Target=FBgn0085400 961 1159 +
Chr2	stalkie_big_nohaplotig	exon	8648840	8648970	98	+	.	Parent=FBgn0085400.mrna2;Target=FBgn0085400 1160 1290 +
Chr2	stalkie_big_nohaplotig	exon	8653366	8653519	100	+	.	Parent=FBgn0085400.mrna2;Target=FBgn0085400 1291 1444 +
Chr2	stalkie_big_nohaplotig	exon	8655348	8655936	99	+	.	Parent=FBgn0085400.mrna2;Target=FBgn0085400 1445 2033 +
Chr2	stalkie_big_nohaplotig	CDS	8648579	8648744	.	+	0	Parent=FBgn0085400.mrna2;Target=FBgn0085400 994 1159 +
Chr2	stalkie_big_nohaplotig	CDS	8648840	8648970	.	+	2	Parent=FBgn0085400.mrna2;Target=FBgn0085400 1160 1290 +
Chr2	stalkie_big_nohaplotig	CDS	8653366	8653519	.	+	0	Parent=FBgn0085400.mrna2;Target=FBgn0085400 1291 1444 +
Chr2	stalkie_big_nohaplotig	CDS	8655348	8655934	.	+	2	Parent=FBgn0085400.mrna2;Target=FBgn0085400 1445 2031 +
Chr2	stalkie_big_nohaplotig	mRNA	7765020	7765104	.	+	.	ID=comp117208_c0_seq1.mrna2;geneID=comp117208_c0_seq1.path2;Name=comp117208_c0_seq1;Dir=indeterminatecoverage=12.6;identity=98.8;matches=84;mismatches=1;indels=0;unknowns=0;Target=comp117208_c0_seq1 665 581 .;CDS_Target=comp117208_c0_seq1 663 581 .;locus=RLOC_00014509
Chr2	stalkie_big_nohaplotig	exon	7765020	7765104	98	+	.	Parent=comp117208_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	7765020	7765102	.	+	1	Parent=comp117208_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	7771841	7772363	.	+	.	ID=comp142489_c0_seq1.mrna1;geneID=comp142489_c0_seq1.path1;Name=comp142489_c0_seq1;Dir=indeterminatecoverage=96.2;identity=97.7;matches=516;mismatches=6;indels=6;unknowns=0;Target=comp142489_c0_seq1 531 5 .;CDS_Target=comp142489_c0_seq1 46 5 .;locus=RLOC_00014509
Chr2	stalkie_big_nohaplotig	exon	7771841	7772363	97	+	.	Parent=comp142489_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7771841	7771883	.	+	0	Parent=comp142489_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7881338	9436058	.	+	.	ID=comp163150_c0_seq1.mrna1;geneID=comp163150_c0_seq1.path1;Name=comp163150_c0_seq1;Dir=sensecoverage=89.9;identity=98.9;matches=3552;mismatches=22;indels=19;unknowns=0;locus=RLOC_00014509
Chr2	stalkie_big_nohaplotig	exon	7881338	7881810	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 143 615 +
Chr2	stalkie_big_nohaplotig	exon	7881944	7882023	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 616 695 +
Chr2	stalkie_big_nohaplotig	exon	7882087	7882221	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 696 830 +
Chr2	stalkie_big_nohaplotig	exon	7882444	7882658	99	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 831 1045 +
Chr2	stalkie_big_nohaplotig	exon	7885680	7885861	99	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 1046 1227 +
Chr2	stalkie_big_nohaplotig	exon	7885946	7886090	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 1228 1372 +
Chr2	stalkie_big_nohaplotig	exon	7886201	7886366	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 1373 1538 +
Chr2	stalkie_big_nohaplotig	exon	7903539	7904463	99	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 1539 2463 +
Chr2	stalkie_big_nohaplotig	exon	7904533	7904745	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 2464 2676 +
Chr2	stalkie_big_nohaplotig	exon	7904903	7905117	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 2677 2891 +
Chr2	stalkie_big_nohaplotig	exon	7911639	7911785	99	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 2892 3038 +
Chr2	stalkie_big_nohaplotig	exon	7911854	7912154	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 3039 3339 +
Chr2	stalkie_big_nohaplotig	exon	7912433	7912483	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 3340 3390 +
Chr2	stalkie_big_nohaplotig	exon	9080190	9080194	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5504 5508 +
Chr2	stalkie_big_nohaplotig	exon	9083932	9083934	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5509 5511 +
Chr2	stalkie_big_nohaplotig	exon	9100044	9100054	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5512 5522 +
Chr2	stalkie_big_nohaplotig	exon	9105655	9105658	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5568 5571 +
Chr2	stalkie_big_nohaplotig	exon	9112217	9112222	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5572 5577 +
Chr2	stalkie_big_nohaplotig	exon	9123752	9123773	59	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5579 5591 +
Chr2	stalkie_big_nohaplotig	exon	9130681	9130688	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5603 5610 +
Chr2	stalkie_big_nohaplotig	exon	9140193	9140202	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5611 5620 +
Chr2	stalkie_big_nohaplotig	exon	9147318	9147319	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5621 5622 +
Chr2	stalkie_big_nohaplotig	exon	9151747	9151754	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5623 5630 +
Chr2	stalkie_big_nohaplotig	exon	9151964	9151970	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5631 5637 +
Chr2	stalkie_big_nohaplotig	exon	9158527	9158536	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5638 5647 +
Chr2	stalkie_big_nohaplotig	exon	9166539	9166542	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5678 5681 +
Chr2	stalkie_big_nohaplotig	exon	9196355	9196360	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5738 5743 +
Chr2	stalkie_big_nohaplotig	exon	9206708	9206714	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5782 5788 +
Chr2	stalkie_big_nohaplotig	exon	9208697	9208706	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5789 5798 +
Chr2	stalkie_big_nohaplotig	exon	9215708	9215712	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5818 5822 +
Chr2	stalkie_big_nohaplotig	exon	9219966	9219970	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5823 5827 +
Chr2	stalkie_big_nohaplotig	exon	9224284	9224293	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5828 5837 +
Chr2	stalkie_big_nohaplotig	exon	9224349	9224350	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5838 5839 +
Chr2	stalkie_big_nohaplotig	exon	9229110	9229119	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5840 5849 +
Chr2	stalkie_big_nohaplotig	exon	9244165	9244169	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5854 5858 +
Chr2	stalkie_big_nohaplotig	exon	9248697	9248707	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5859 5869 +
Chr2	stalkie_big_nohaplotig	exon	9258639	9258641	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5878 5880 +
Chr2	stalkie_big_nohaplotig	exon	9263482	9263486	60	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5881 5885 +
Chr2	stalkie_big_nohaplotig	exon	9271240	9271285	63	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5886 5928 +
Chr2	stalkie_big_nohaplotig	exon	9275271	9275277	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5929 5935 +
Chr2	stalkie_big_nohaplotig	exon	9286975	9286982	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5996 6003 +
Chr2	stalkie_big_nohaplotig	exon	9291568	9291579	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 6048 6059 +
Chr2	stalkie_big_nohaplotig	exon	9318063	9318064	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 6073 6074 +
Chr2	stalkie_big_nohaplotig	exon	9374256	9374261	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 6075 6080 +
Chr2	stalkie_big_nohaplotig	exon	9384768	9384786	57	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 6150 6161 +
Chr2	stalkie_big_nohaplotig	exon	9384798	9384803	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 6182 6187 +
Chr2	stalkie_big_nohaplotig	exon	9397448	9397450	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 6188 6190 +
Chr2	stalkie_big_nohaplotig	exon	9409329	9409336	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 6191 6198 +
Chr2	stalkie_big_nohaplotig	exon	9409368	9409377	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 6254 6263 +
Chr2	stalkie_big_nohaplotig	exon	9409939	9409946	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 6310 6317 +
Chr2	stalkie_big_nohaplotig	exon	9436040	9436048	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 6335 6343 +
Chr2	stalkie_big_nohaplotig	exon	9436051	9436058	100	+	.	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 6384 6391 +
Chr2	stalkie_big_nohaplotig	CDS	7881696	7881810	.	+	0	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 501 615 +
Chr2	stalkie_big_nohaplotig	CDS	7881944	7882023	.	+	2	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 616 695 +
Chr2	stalkie_big_nohaplotig	CDS	7882087	7882221	.	+	0	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 696 830 +
Chr2	stalkie_big_nohaplotig	CDS	7882444	7882658	.	+	0	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 831 1045 +
Chr2	stalkie_big_nohaplotig	CDS	7885680	7885861	.	+	1	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 1046 1227 +
Chr2	stalkie_big_nohaplotig	CDS	7885946	7886090	.	+	2	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 1228 1372 +
Chr2	stalkie_big_nohaplotig	CDS	7886201	7886366	.	+	1	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 1373 1538 +
Chr2	stalkie_big_nohaplotig	CDS	7903539	7904463	.	+	0	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 1539 2463 +
Chr2	stalkie_big_nohaplotig	CDS	7904533	7904745	.	+	2	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 2464 2676 +
Chr2	stalkie_big_nohaplotig	CDS	7904903	7905117	.	+	2	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 2677 2891 +
Chr2	stalkie_big_nohaplotig	CDS	7911639	7911785	.	+	0	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 2892 3038 +
Chr2	stalkie_big_nohaplotig	CDS	7911854	7912154	.	+	0	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 3039 3339 +
Chr2	stalkie_big_nohaplotig	CDS	7912433	7912483	.	+	2	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 3340 3390 +
Chr2	stalkie_big_nohaplotig	CDS	9080190	9080194	.	+	2	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5504 5508 +
Chr2	stalkie_big_nohaplotig	CDS	9083932	9083934	.	+	0	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5509 5511 +
Chr2	stalkie_big_nohaplotig	CDS	9100044	9100048	.	+	0	Parent=comp163150_c0_seq1.mrna1;Target=comp163150_c0_seq1 5512 5516 +
Chr2	stalkie_big_nohaplotig	mRNA	7881654	9499742	.	+	.	ID=FBgn0028496.1.mrna1;geneID=FBgn0028496.1.path1;Name=FBgn0028496.1;Dir=sensecoverage=100.0;identity=98.0;matches=3298;mismatches=40;indels=26;unknowns=0;locus=RLOC_00014509
Chr2	stalkie_big_nohaplotig	exon	7881654	7881810	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 1 157 +
Chr2	stalkie_big_nohaplotig	exon	7881944	7882023	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 158 237 +
Chr2	stalkie_big_nohaplotig	exon	7882087	7882221	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 238 372 +
Chr2	stalkie_big_nohaplotig	exon	7882444	7882658	99	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 373 587 +
Chr2	stalkie_big_nohaplotig	exon	7885680	7885861	99	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 588 769 +
Chr2	stalkie_big_nohaplotig	exon	7885946	7886090	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 770 914 +
Chr2	stalkie_big_nohaplotig	exon	7886201	7886366	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 915 1080 +
Chr2	stalkie_big_nohaplotig	exon	7903539	7904463	99	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 1081 2005 +
Chr2	stalkie_big_nohaplotig	exon	7904533	7904745	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 2006 2218 +
Chr2	stalkie_big_nohaplotig	exon	7904903	7905117	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 2219 2433 +
Chr2	stalkie_big_nohaplotig	exon	7911639	7911785	99	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 2434 2580 +
Chr2	stalkie_big_nohaplotig	exon	7911854	7912154	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 2581 2881 +
Chr2	stalkie_big_nohaplotig	exon	7912433	7912463	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 2882 2912 +
Chr2	stalkie_big_nohaplotig	exon	8572602	8572604	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4013 4015 +
Chr2	stalkie_big_nohaplotig	exon	8580258	8580266	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4016 4024 +
Chr2	stalkie_big_nohaplotig	exon	8589275	8589276	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4025 4026 +
Chr2	stalkie_big_nohaplotig	exon	8597030	8597036	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4027 4033 +
Chr2	stalkie_big_nohaplotig	exon	8603322	8603327	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4063 4068 +
Chr2	stalkie_big_nohaplotig	exon	8606775	8606777	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4069 4071 +
Chr2	stalkie_big_nohaplotig	exon	8610314	8610321	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4072 4079 +
Chr2	stalkie_big_nohaplotig	exon	8615148	8615151	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4080 4083 +
Chr2	stalkie_big_nohaplotig	exon	8621830	8621844	80	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4084 4098 +
Chr2	stalkie_big_nohaplotig	exon	8628081	8628091	90	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4099 4109 +
Chr2	stalkie_big_nohaplotig	exon	8628095	8628102	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4128 4135 +
Chr2	stalkie_big_nohaplotig	exon	8630744	8630751	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4136 4143 +
Chr2	stalkie_big_nohaplotig	exon	8630981	8630991	90	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4144 4154 +
Chr2	stalkie_big_nohaplotig	exon	8633663	8633673	81	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4155 4165 +
Chr2	stalkie_big_nohaplotig	exon	8641103	8641108	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4166 4171 +
Chr2	stalkie_big_nohaplotig	exon	8648553	8648555	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4220 4222 +
Chr2	stalkie_big_nohaplotig	exon	8667967	8667969	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4223 4225 +
Chr2	stalkie_big_nohaplotig	exon	8689286	8689294	66	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4226 4234 +
Chr2	stalkie_big_nohaplotig	exon	8692644	8692645	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4235 4236 +
Chr2	stalkie_big_nohaplotig	exon	8700638	8700651	85	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4237 4250 +
Chr2	stalkie_big_nohaplotig	exon	8707294	8707304	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4251 4261 +
Chr2	stalkie_big_nohaplotig	exon	8710277	8710279	33	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4262 4264 +
Chr2	stalkie_big_nohaplotig	exon	8724010	8724014	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5511 5515 +
Chr2	stalkie_big_nohaplotig	exon	8730423	8730430	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5516 5523 +
Chr2	stalkie_big_nohaplotig	exon	8737889	8737894	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5524 5529 +
Chr2	stalkie_big_nohaplotig	exon	8740335	8740337	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5530 5532 +
Chr2	stalkie_big_nohaplotig	exon	8747942	8747949	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5533 5540 +
Chr2	stalkie_big_nohaplotig	exon	8755747	8755765	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5541 5559 +
Chr2	stalkie_big_nohaplotig	exon	9290002	9290010	63	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5748 5758 +
Chr2	stalkie_big_nohaplotig	exon	9326773	9326784	91	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5759 5770 +
Chr2	stalkie_big_nohaplotig	exon	9333690	9333694	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5812 5816 +
Chr2	stalkie_big_nohaplotig	exon	9347819	9347826	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5817 5824 +
Chr2	stalkie_big_nohaplotig	exon	9354447	9354450	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5825 5828 +
Chr2	stalkie_big_nohaplotig	exon	9355648	9355657	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5829 5838 +
Chr2	stalkie_big_nohaplotig	exon	9360181	9360182	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5848 5849 +
Chr2	stalkie_big_nohaplotig	exon	9385449	9385459	90	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5850 5860 +
Chr2	stalkie_big_nohaplotig	exon	9396041	9396049	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5861 5869 +
Chr2	stalkie_big_nohaplotig	exon	9404258	9404266	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5870 5878 +
Chr2	stalkie_big_nohaplotig	exon	9436895	9436916	47	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5913 5952 +
Chr2	stalkie_big_nohaplotig	exon	9444270	9444272	66	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5953 5955 +
Chr2	stalkie_big_nohaplotig	exon	9454229	9454237	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5956 5964 +
Chr2	stalkie_big_nohaplotig	exon	9455404	9455410	57	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5965 5971 +
Chr2	stalkie_big_nohaplotig	exon	9472577	9472578	50	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5972 5973 +
Chr2	stalkie_big_nohaplotig	exon	9473178	9473197	85	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5974 5993 +
Chr2	stalkie_big_nohaplotig	exon	9474981	9474985	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5994 5998 +
Chr2	stalkie_big_nohaplotig	exon	9487660	9487667	100	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5999 6006 +
Chr2	stalkie_big_nohaplotig	exon	9489961	9489985	56	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 6016 6034 +
Chr2	stalkie_big_nohaplotig	exon	9499702	9499742	97	+	.	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 6035 6075 +
Chr2	stalkie_big_nohaplotig	CDS	7881654	7881810	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 1 157 +
Chr2	stalkie_big_nohaplotig	CDS	7881944	7882023	.	+	2	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 158 237 +
Chr2	stalkie_big_nohaplotig	CDS	7882087	7882221	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 238 372 +
Chr2	stalkie_big_nohaplotig	CDS	7882444	7882658	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 373 587 +
Chr2	stalkie_big_nohaplotig	CDS	7885680	7885861	.	+	1	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 588 769 +
Chr2	stalkie_big_nohaplotig	CDS	7885946	7886090	.	+	2	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 770 914 +
Chr2	stalkie_big_nohaplotig	CDS	7886201	7886366	.	+	1	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 915 1080 +
Chr2	stalkie_big_nohaplotig	CDS	7903539	7904463	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 1081 2005 +
Chr2	stalkie_big_nohaplotig	CDS	7904533	7904745	.	+	2	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 2006 2218 +
Chr2	stalkie_big_nohaplotig	CDS	7904903	7905117	.	+	2	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 2219 2433 +
Chr2	stalkie_big_nohaplotig	CDS	7911639	7911785	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 2434 2580 +
Chr2	stalkie_big_nohaplotig	CDS	7911854	7912154	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 2581 2881 +
Chr2	stalkie_big_nohaplotig	CDS	7912433	7912463	.	+	2	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 2882 2912 +
Chr2	stalkie_big_nohaplotig	CDS	8572602	8572604	.	+	1	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4013 4015 +
Chr2	stalkie_big_nohaplotig	CDS	8580258	8580266	.	+	1	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4016 4024 +
Chr2	stalkie_big_nohaplotig	CDS	8589275	8589276	.	+	1	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4025 4026 +
Chr2	stalkie_big_nohaplotig	CDS	8597030	8597036	.	+	2	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4027 4033 +
Chr2	stalkie_big_nohaplotig	CDS	8603322	8603327	.	+	1	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4063 4068 +
Chr2	stalkie_big_nohaplotig	CDS	8606775	8606777	.	+	1	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4069 4071 +
Chr2	stalkie_big_nohaplotig	CDS	8610314	8610321	.	+	1	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4072 4079 +
Chr2	stalkie_big_nohaplotig	CDS	8615148	8615151	.	+	2	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4080 4083 +
Chr2	stalkie_big_nohaplotig	CDS	8621830	8621844	.	+	1	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4084 4098 +
Chr2	stalkie_big_nohaplotig	CDS	8628081	8628091	.	+	1	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4099 4109 +
Chr2	stalkie_big_nohaplotig	CDS	8628095	8628102	.	+	2	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4128 4135 +
Chr2	stalkie_big_nohaplotig	CDS	8630744	8630751	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4136 4143 +
Chr2	stalkie_big_nohaplotig	CDS	8630981	8630991	.	+	1	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4144 4154 +
Chr2	stalkie_big_nohaplotig	CDS	8633663	8633673	.	+	2	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4155 4165 +
Chr2	stalkie_big_nohaplotig	CDS	8641103	8641108	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4166 4171 +
Chr2	stalkie_big_nohaplotig	CDS	8648553	8648555	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4220 4222 +
Chr2	stalkie_big_nohaplotig	CDS	8667967	8667969	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4223 4225 +
Chr2	stalkie_big_nohaplotig	CDS	8689286	8689294	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4226 4234 +
Chr2	stalkie_big_nohaplotig	CDS	8692644	8692645	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4235 4236 +
Chr2	stalkie_big_nohaplotig	CDS	8700638	8700651	.	+	1	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4237 4250 +
Chr2	stalkie_big_nohaplotig	CDS	8707294	8707304	.	+	2	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4251 4261 +
Chr2	stalkie_big_nohaplotig	CDS	8710277	8710279	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 4262 4264 +
Chr2	stalkie_big_nohaplotig	CDS	8724010	8724014	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5511 5515 +
Chr2	stalkie_big_nohaplotig	CDS	8730423	8730430	.	+	1	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5516 5523 +
Chr2	stalkie_big_nohaplotig	CDS	8737889	8737894	.	+	2	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5524 5529 +
Chr2	stalkie_big_nohaplotig	CDS	8740335	8740337	.	+	2	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5530 5532 +
Chr2	stalkie_big_nohaplotig	CDS	8747942	8747949	.	+	2	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5533 5540 +
Chr2	stalkie_big_nohaplotig	CDS	8755747	8755765	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5541 5559 +
Chr2	stalkie_big_nohaplotig	CDS	9290002	9290010	.	+	2	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5748 5758 +
Chr2	stalkie_big_nohaplotig	CDS	9326773	9326784	.	+	2	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5759 5770 +
Chr2	stalkie_big_nohaplotig	CDS	9333690	9333694	.	+	2	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5812 5816 +
Chr2	stalkie_big_nohaplotig	CDS	9347819	9347826	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5817 5824 +
Chr2	stalkie_big_nohaplotig	CDS	9354447	9354450	.	+	1	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5825 5828 +
Chr2	stalkie_big_nohaplotig	CDS	9355648	9355657	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5829 5838 +
Chr2	stalkie_big_nohaplotig	CDS	9360181	9360182	.	+	2	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5848 5849 +
Chr2	stalkie_big_nohaplotig	CDS	9385449	9385459	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5850 5860 +
Chr2	stalkie_big_nohaplotig	CDS	9396041	9396049	.	+	1	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5861 5869 +
Chr2	stalkie_big_nohaplotig	CDS	9404258	9404266	.	+	1	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5870 5878 +
Chr2	stalkie_big_nohaplotig	CDS	9436895	9436916	.	+	1	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5913 5952 +
Chr2	stalkie_big_nohaplotig	CDS	9444270	9444272	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5953 5955 +
Chr2	stalkie_big_nohaplotig	CDS	9454229	9454237	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5956 5964 +
Chr2	stalkie_big_nohaplotig	CDS	9455404	9455410	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5965 5971 +
Chr2	stalkie_big_nohaplotig	CDS	9472577	9472578	.	+	2	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5972 5973 +
Chr2	stalkie_big_nohaplotig	CDS	9473178	9473197	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5974 5993 +
Chr2	stalkie_big_nohaplotig	CDS	9474981	9474985	.	+	1	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5994 5998 +
Chr2	stalkie_big_nohaplotig	CDS	9487660	9487667	.	+	2	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 5999 6006 +
Chr2	stalkie_big_nohaplotig	CDS	9489961	9489985	.	+	0	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 6016 6034 +
Chr2	stalkie_big_nohaplotig	CDS	9499702	9499742	.	+	2	Parent=FBgn0028496.1.mrna1;Target=FBgn0028496.1 6035 6075 +
Chr2	stalkie_big_nohaplotig	mRNA	7968275	7972911	.	+	.	ID=FBgn0033292.1.mrna1;geneID=FBgn0033292.1.path1;Name=FBgn0033292.1;Dir=sensecoverage=100.0;identity=99.3;matches=1590;mismatches=12;indels=0;unknowns=0;locus=RLOC_00014509
Chr2	stalkie_big_nohaplotig	exon	7968275	7968461	98	+	.	Parent=FBgn0033292.1.mrna1;Target=FBgn0033292.1 1 187 +
Chr2	stalkie_big_nohaplotig	exon	7970231	7970340	99	+	.	Parent=FBgn0033292.1.mrna1;Target=FBgn0033292.1 188 297 +
Chr2	stalkie_big_nohaplotig	exon	7970409	7970688	99	+	.	Parent=FBgn0033292.1.mrna1;Target=FBgn0033292.1 298 577 +
Chr2	stalkie_big_nohaplotig	exon	7970754	7970823	97	+	.	Parent=FBgn0033292.1.mrna1;Target=FBgn0033292.1 578 647 +
Chr2	stalkie_big_nohaplotig	exon	7970885	7971011	98	+	.	Parent=FBgn0033292.1.mrna1;Target=FBgn0033292.1 648 774 +
Chr2	stalkie_big_nohaplotig	exon	7971894	7972085	98	+	.	Parent=FBgn0033292.1.mrna1;Target=FBgn0033292.1 775 966 +
Chr2	stalkie_big_nohaplotig	exon	7972149	7972389	99	+	.	Parent=FBgn0033292.1.mrna1;Target=FBgn0033292.1 967 1207 +
Chr2	stalkie_big_nohaplotig	exon	7972455	7972634	100	+	.	Parent=FBgn0033292.1.mrna1;Target=FBgn0033292.1 1208 1387 +
Chr2	stalkie_big_nohaplotig	exon	7972697	7972911	100	+	.	Parent=FBgn0033292.1.mrna1;Target=FBgn0033292.1 1388 1602 +
Chr2	stalkie_big_nohaplotig	CDS	7968275	7968461	.	+	0	Parent=FBgn0033292.1.mrna1;Target=FBgn0033292.1 1 187 +
Chr2	stalkie_big_nohaplotig	CDS	7970231	7970340	.	+	2	Parent=FBgn0033292.1.mrna1;Target=FBgn0033292.1 188 297 +
Chr2	stalkie_big_nohaplotig	CDS	7970409	7970688	.	+	0	Parent=FBgn0033292.1.mrna1;Target=FBgn0033292.1 298 577 +
Chr2	stalkie_big_nohaplotig	CDS	7970754	7970823	.	+	2	Parent=FBgn0033292.1.mrna1;Target=FBgn0033292.1 578 647 +
Chr2	stalkie_big_nohaplotig	CDS	7970885	7971011	.	+	1	Parent=FBgn0033292.1.mrna1;Target=FBgn0033292.1 648 774 +
Chr2	stalkie_big_nohaplotig	CDS	7971894	7972085	.	+	0	Parent=FBgn0033292.1.mrna1;Target=FBgn0033292.1 775 966 +
Chr2	stalkie_big_nohaplotig	CDS	7972149	7972389	.	+	0	Parent=FBgn0033292.1.mrna1;Target=FBgn0033292.1 967 1207 +
Chr2	stalkie_big_nohaplotig	CDS	7972455	7972634	.	+	2	Parent=FBgn0033292.1.mrna1;Target=FBgn0033292.1 1208 1387 +
Chr2	stalkie_big_nohaplotig	CDS	7972697	7972911	.	+	2	Parent=FBgn0033292.1.mrna1;Target=FBgn0033292.1 1388 1602 +
Chr2	stalkie_big_nohaplotig	mRNA	7970988	7974186	.	+	.	ID=comp152668_c0_seq1.mrna1;geneID=comp152668_c0_seq1.path1;Name=comp152668_c0_seq1;Dir=sensecoverage=99.9;identity=98.6;matches=850;mismatches=6;indels=6;unknowns=0;Target=comp152668_c0_seq1 178 249 +;locus=RLOC_00014509
Chr2	stalkie_big_nohaplotig	exon	7970988	7971273	98	+	.	Parent=comp152668_c0_seq1.mrna1;Target=comp152668_c0_seq1 1 286 +
Chr2	stalkie_big_nohaplotig	exon	7973299	7973355	98	+	.	Parent=comp152668_c0_seq1.mrna1;Target=comp152668_c0_seq1 303 360 +
Chr2	stalkie_big_nohaplotig	exon	7973669	7974186	98	+	.	Parent=comp152668_c0_seq1.mrna1;Target=comp152668_c0_seq1 361 873 +
Chr2	stalkie_big_nohaplotig	CDS	7971165	7971236	.	+	0	Parent=comp152668_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7974965	7976152	.	-	.	ID=comp148483_c1_seq1.mrna1;geneID=comp148483_c1_seq1.path1;Name=comp148483_c1_seq1;Dir=indeterminatecoverage=99.2;identity=93.8;matches=1129;mismatches=29;indels=45;unknowns=0;Target=comp148483_c1_seq1 1183 11 .;CDS_Target=comp148483_c1_seq1 869 510 .;locus=RLOC_00014509
Chr2	stalkie_big_nohaplotig	exon	7974965	7976152	93	-	.	Parent=comp148483_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7975309	7975668	.	-	0	Parent=comp148483_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9083494	9084268	.	-	.	ID=comp144454_c0_seq1.mrna1;geneID=comp144454_c0_seq1.path1;Name=comp144454_c0_seq1;Dir=indeterminatecoverage=93.4;identity=99.9;matches=774;mismatches=1;indels=0;unknowns=0;Target=comp144454_c0_seq1 775 1 .;CDS_Target=comp144454_c0_seq1 490 173 .;locus=RLOC_00014509
Chr2	stalkie_big_nohaplotig	exon	9083494	9084268	99	-	.	Parent=comp144454_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9083779	9084096	.	-	0	Parent=comp144454_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9158043	9159503	.	+	.	ID=FBgn0033692.1.mrna1;geneID=FBgn0033692.1.path1;Name=FBgn0033692.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1461;mismatches=0;indels=0;unknowns=0;Target=FBgn0033692.1 1461 1 .;locus=RLOC_00014509
Chr2	stalkie_big_nohaplotig	exon	9158043	9159503	100	+	.	Parent=FBgn0033692.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9158043	9159503	.	+	0	Parent=FBgn0033692.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9195447	9202689	.	+	.	ID=FBgn0033339.1.mrna1;geneID=FBgn0033339.1.path1;Name=FBgn0033339.1;Dir=sensecoverage=100.0;identity=99.5;matches=3935;mismatches=18;indels=0;unknowns=4;locus=RLOC_00014509
Chr2	stalkie_big_nohaplotig	exon	9195447	9195667	100	+	.	Parent=FBgn0033339.1.mrna1;Target=FBgn0033339.1 1 221 +
Chr2	stalkie_big_nohaplotig	exon	9195724	9196693	99	+	.	Parent=FBgn0033339.1.mrna1;Target=FBgn0033339.1 222 1191 +
Chr2	stalkie_big_nohaplotig	exon	9196764	9197007	99	+	.	Parent=FBgn0033339.1.mrna1;Target=FBgn0033339.1 1192 1435 +
Chr2	stalkie_big_nohaplotig	exon	9197082	9197191	99	+	.	Parent=FBgn0033339.1.mrna1;Target=FBgn0033339.1 1436 1545 +
Chr2	stalkie_big_nohaplotig	exon	9198055	9198160	97	+	.	Parent=FBgn0033339.1.mrna1;Target=FBgn0033339.1 1546 1651 +
Chr2	stalkie_big_nohaplotig	exon	9198280	9199697	99	+	.	Parent=FBgn0033339.1.mrna1;Target=FBgn0033339.1 1652 3069 +
Chr2	stalkie_big_nohaplotig	exon	9200007	9200189	100	+	.	Parent=FBgn0033339.1.mrna1;Target=FBgn0033339.1 3070 3252 +
Chr2	stalkie_big_nohaplotig	exon	9200402	9200512	100	+	.	Parent=FBgn0033339.1.mrna1;Target=FBgn0033339.1 3253 3363 +
Chr2	stalkie_big_nohaplotig	exon	9200590	9200925	99	+	.	Parent=FBgn0033339.1.mrna1;Target=FBgn0033339.1 3364 3699 +
Chr2	stalkie_big_nohaplotig	exon	9202371	9202442	100	+	.	Parent=FBgn0033339.1.mrna1;Target=FBgn0033339.1 3700 3771 +
Chr2	stalkie_big_nohaplotig	exon	9202504	9202689	100	+	.	Parent=FBgn0033339.1.mrna1;Target=FBgn0033339.1 3772 3957 +
Chr2	stalkie_big_nohaplotig	CDS	9195447	9195667	.	+	0	Parent=FBgn0033339.1.mrna1;Target=FBgn0033339.1 1 221 +
Chr2	stalkie_big_nohaplotig	CDS	9195724	9196693	.	+	1	Parent=FBgn0033339.1.mrna1;Target=FBgn0033339.1 222 1191 +
Chr2	stalkie_big_nohaplotig	CDS	9196764	9197007	.	+	0	Parent=FBgn0033339.1.mrna1;Target=FBgn0033339.1 1192 1435 +
Chr2	stalkie_big_nohaplotig	CDS	9197082	9197191	.	+	2	Parent=FBgn0033339.1.mrna1;Target=FBgn0033339.1 1436 1545 +
Chr2	stalkie_big_nohaplotig	CDS	9198055	9198160	.	+	0	Parent=FBgn0033339.1.mrna1;Target=FBgn0033339.1 1546 1651 +
Chr2	stalkie_big_nohaplotig	CDS	9198280	9199697	.	+	2	Parent=FBgn0033339.1.mrna1;Target=FBgn0033339.1 1652 3069 +
Chr2	stalkie_big_nohaplotig	CDS	9200007	9200189	.	+	0	Parent=FBgn0033339.1.mrna1;Target=FBgn0033339.1 3070 3252 +
Chr2	stalkie_big_nohaplotig	CDS	9200402	9200512	.	+	0	Parent=FBgn0033339.1.mrna1;Target=FBgn0033339.1 3253 3363 +
Chr2	stalkie_big_nohaplotig	CDS	9200590	9200925	.	+	0	Parent=FBgn0033339.1.mrna1;Target=FBgn0033339.1 3364 3699 +
Chr2	stalkie_big_nohaplotig	CDS	9202371	9202442	.	+	0	Parent=FBgn0033339.1.mrna1;Target=FBgn0033339.1 3700 3771 +
Chr2	stalkie_big_nohaplotig	CDS	9202504	9202689	.	+	0	Parent=FBgn0033339.1.mrna1;Target=FBgn0033339.1 3772 3957 +
Chr2	stalkie_big_nohaplotig	mRNA	9399428	9404602	.	+	.	ID=comp160461_c3_seq1.mrna1;geneID=comp160461_c3_seq1.path1;Name=comp160461_c3_seq1;Dir=indeterminatecoverage=88.8;identity=99.1;matches=3294;mismatches=6;indels=25;unknowns=0;Target=comp160461_c3_seq1 2189 624 .;locus=RLOC_00014509
Chr2	stalkie_big_nohaplotig	exon	9399428	9399439	100	+	.	Parent=comp160461_c3_seq1.mrna1;Target=comp160461_c3_seq1 433 422 .
Chr2	stalkie_big_nohaplotig	exon	9401302	9404602	99	+	.	Parent=comp160461_c3_seq1.mrna1;Target=comp160461_c3_seq1 3769 470 .
Chr2	stalkie_big_nohaplotig	CDS	9401456	9403021	.	+	0	Parent=comp160461_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9499473	9500474	.	+	.	ID=comp154845_c0_seq1.mrna1;geneID=comp154845_c0_seq1.path1;Name=comp154845_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=975;mismatches=10;indels=17;unknowns=0;Target=comp154845_c0_seq1 985 1 .;CDS_Target=comp154845_c0_seq1 431 363 .;locus=RLOC_00014509
Chr2	stalkie_big_nohaplotig	exon	9499473	9500474	97	+	.	Parent=comp154845_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9499844	9499912	.	+	0	Parent=comp154845_c0_seq1.mrna1
Chr2	gffcl	locus	7719300	7719972	.	+	.	ID=RLOC_00014510;geneIDs=comp96773_c0_seq1.path1;transcripts=comp96773_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7719300	7719972	.	+	.	ID=comp96773_c0_seq1.mrna1;geneID=comp96773_c0_seq1.path1;Name=comp96773_c0_seq1;Dir=indeterminatecoverage=97.2;identity=98.7;matches=664;mismatches=6;indels=3;unknowns=0;Target=comp96773_c0_seq1 670 1 .;CDS_Target=comp96773_c0_seq1 113 3 .;locus=RLOC_00014510
Chr2	stalkie_big_nohaplotig	exon	7719300	7719972	98	+	.	Parent=comp96773_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7719302	7719413	.	+	0	Parent=comp96773_c0_seq1.mrna1
Chr2	gffcl	locus	7720653	7726513	.	-	.	ID=RLOC_00014511;geneIDs=FBgn0033289.1.path1,comp3742_c0_seq1.path1;transcripts=FBgn0033289.1.mrna1,comp3742_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7720653	7726513	.	-	.	ID=FBgn0033289.1.mrna1;geneID=FBgn0033289.1.path1;Name=FBgn0033289.1;Dir=sensecoverage=99.6;identity=99.0;matches=1552;mismatches=16;indels=0;unknowns=0;locus=RLOC_00014511
Chr2	stalkie_big_nohaplotig	exon	7720653	7720716	98	-	.	Parent=FBgn0033289.1.mrna1;Target=FBgn0033289.1 1512 1575 +
Chr2	stalkie_big_nohaplotig	exon	7720781	7720943	98	-	.	Parent=FBgn0033289.1.mrna1;Target=FBgn0033289.1 1349 1511 +
Chr2	stalkie_big_nohaplotig	exon	7721792	7722059	98	-	.	Parent=FBgn0033289.1.mrna1;Target=FBgn0033289.1 1081 1348 +
Chr2	stalkie_big_nohaplotig	exon	7722136	7722295	100	-	.	Parent=FBgn0033289.1.mrna1;Target=FBgn0033289.1 921 1080 +
Chr2	stalkie_big_nohaplotig	exon	7722348	7722615	100	-	.	Parent=FBgn0033289.1.mrna1;Target=FBgn0033289.1 653 920 +
Chr2	stalkie_big_nohaplotig	exon	7722672	7722964	99	-	.	Parent=FBgn0033289.1.mrna1;Target=FBgn0033289.1 360 652 +
Chr2	stalkie_big_nohaplotig	exon	7726162	7726513	98	-	.	Parent=FBgn0033289.1.mrna1;Target=FBgn0033289.1 8 359 +
Chr2	stalkie_big_nohaplotig	CDS	7720653	7720716	.	-	1	Parent=FBgn0033289.1.mrna1;Target=FBgn0033289.1 1512 1575 +
Chr2	stalkie_big_nohaplotig	CDS	7720781	7720943	.	-	2	Parent=FBgn0033289.1.mrna1;Target=FBgn0033289.1 1349 1511 +
Chr2	stalkie_big_nohaplotig	CDS	7721792	7722059	.	-	0	Parent=FBgn0033289.1.mrna1;Target=FBgn0033289.1 1081 1348 +
Chr2	stalkie_big_nohaplotig	CDS	7722136	7722295	.	-	1	Parent=FBgn0033289.1.mrna1;Target=FBgn0033289.1 921 1080 +
Chr2	stalkie_big_nohaplotig	CDS	7722348	7722615	.	-	2	Parent=FBgn0033289.1.mrna1;Target=FBgn0033289.1 653 920 +
Chr2	stalkie_big_nohaplotig	CDS	7722672	7722964	.	-	1	Parent=FBgn0033289.1.mrna1;Target=FBgn0033289.1 360 652 +
Chr2	stalkie_big_nohaplotig	CDS	7726162	7726511	.	-	0	Parent=FBgn0033289.1.mrna1;Target=FBgn0033289.1 10 359 +
Chr2	stalkie_big_nohaplotig	mRNA	7725640	7726185	.	-	.	ID=comp3742_c0_seq1.mrna1;geneID=comp3742_c0_seq1.path1;Name=comp3742_c0_seq1;Dir=indeterminatecoverage=99.5;identity=96.4;matches=528;mismatches=16;indels=4;unknowns=0;Target=comp3742_c0_seq1 546 1 .;CDS_Target=comp3742_c0_seq1 190 38 .;locus=RLOC_00014511
Chr2	stalkie_big_nohaplotig	exon	7725640	7726185	96	-	.	Parent=comp3742_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7725996	7726148	.	-	0	Parent=comp3742_c0_seq1.mrna1
Chr2	gffcl	locus	7759570	7807541	.	.	.	ID=RLOC_00014512;geneIDs=FBgn0028494.1.path1,Dv_FBgn0209596.path1,comp150701_c0_seq1.path2;transcripts=Dv_FBgn0209596.mrna1,FBgn0028494.1.mrna1,comp150701_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	7759570	7807541	.	+	.	ID=Dv_FBgn0209596.mrna1;geneID=Dv_FBgn0209596.path1;Name=Dv_FBgn0209596;Dir=sensecoverage=68.8;identity=99.7;matches=867;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014512
Chr2	stalkie_big_nohaplotig	exon	7759570	7759674	99	+	.	Parent=Dv_FBgn0209596.mrna1;Target=Dv_FBgn0209596 1 105 +
Chr2	stalkie_big_nohaplotig	exon	7762836	7763558	99	+	.	Parent=Dv_FBgn0209596.mrna1;Target=Dv_FBgn0209596 106 828 +
Chr2	stalkie_big_nohaplotig	exon	7766212	7766216	80	+	.	Parent=Dv_FBgn0209596.mrna1;Target=Dv_FBgn0209596 874 878 +
Chr2	stalkie_big_nohaplotig	exon	7767995	7768000	100	+	.	Parent=Dv_FBgn0209596.mrna1;Target=Dv_FBgn0209596 879 884 +
Chr2	stalkie_big_nohaplotig	exon	7773568	7773572	100	+	.	Parent=Dv_FBgn0209596.mrna1;Target=Dv_FBgn0209596 885 889 +
Chr2	stalkie_big_nohaplotig	exon	7777658	7777662	100	+	.	Parent=Dv_FBgn0209596.mrna1;Target=Dv_FBgn0209596 890 894 +
Chr2	stalkie_big_nohaplotig	exon	7792521	7792523	100	+	.	Parent=Dv_FBgn0209596.mrna1;Target=Dv_FBgn0209596 895 897 +
Chr2	stalkie_big_nohaplotig	exon	7799998	7800001	100	+	.	Parent=Dv_FBgn0209596.mrna1;Target=Dv_FBgn0209596 898 901 +
Chr2	stalkie_big_nohaplotig	exon	7802117	7802124	100	+	.	Parent=Dv_FBgn0209596.mrna1;Target=Dv_FBgn0209596 902 909 +
Chr2	stalkie_big_nohaplotig	exon	7807538	7807541	100	+	.	Parent=Dv_FBgn0209596.mrna1;Target=Dv_FBgn0209596 910 913 +
Chr2	stalkie_big_nohaplotig	CDS	7759570	7759674	.	+	0	Parent=Dv_FBgn0209596.mrna1;Target=Dv_FBgn0209596 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	7762836	7763558	.	+	0	Parent=Dv_FBgn0209596.mrna1;Target=Dv_FBgn0209596 106 828 +
Chr2	stalkie_big_nohaplotig	CDS	7766212	7766216	.	+	0	Parent=Dv_FBgn0209596.mrna1;Target=Dv_FBgn0209596 874 878 +
Chr2	stalkie_big_nohaplotig	CDS	7767995	7768000	.	+	1	Parent=Dv_FBgn0209596.mrna1;Target=Dv_FBgn0209596 879 884 +
Chr2	stalkie_big_nohaplotig	CDS	7773568	7773572	.	+	1	Parent=Dv_FBgn0209596.mrna1;Target=Dv_FBgn0209596 885 889 +
Chr2	stalkie_big_nohaplotig	CDS	7777658	7777662	.	+	2	Parent=Dv_FBgn0209596.mrna1;Target=Dv_FBgn0209596 890 894 +
Chr2	stalkie_big_nohaplotig	CDS	7792521	7792523	.	+	0	Parent=Dv_FBgn0209596.mrna1;Target=Dv_FBgn0209596 895 897 +
Chr2	stalkie_big_nohaplotig	CDS	7799998	7800001	.	+	0	Parent=Dv_FBgn0209596.mrna1;Target=Dv_FBgn0209596 898 901 +
Chr2	stalkie_big_nohaplotig	CDS	7802117	7802124	.	+	2	Parent=Dv_FBgn0209596.mrna1;Target=Dv_FBgn0209596 902 909 +
Chr2	stalkie_big_nohaplotig	CDS	7807538	7807541	.	+	0	Parent=Dv_FBgn0209596.mrna1;Target=Dv_FBgn0209596 910 913 +
Chr2	stalkie_big_nohaplotig	mRNA	7763541	7767983	.	+	.	ID=FBgn0028494.1.mrna1;geneID=FBgn0028494.1.path1;Name=FBgn0028494.1;Dir=sensecoverage=100.0;identity=99.8;matches=1910;mismatches=4;indels=0;unknowns=0;locus=RLOC_00014512
Chr2	stalkie_big_nohaplotig	exon	7763541	7764779	99	+	.	Parent=FBgn0028494.1.mrna1;Target=FBgn0028494.1 1 1239 +
Chr2	stalkie_big_nohaplotig	exon	7767309	7767983	99	+	.	Parent=FBgn0028494.1.mrna1;Target=FBgn0028494.1 1240 1914 +
Chr2	stalkie_big_nohaplotig	CDS	7763541	7764779	.	+	0	Parent=FBgn0028494.1.mrna1;Target=FBgn0028494.1 1 1239 +
Chr2	stalkie_big_nohaplotig	CDS	7767309	7767983	.	+	0	Parent=FBgn0028494.1.mrna1;Target=FBgn0028494.1 1240 1914 +
Chr2	stalkie_big_nohaplotig	mRNA	7766121	7766480	.	-	.	ID=comp150701_c0_seq1.mrna2;geneID=comp150701_c0_seq1.path2;Name=comp150701_c0_seq1;Dir=indeterminatecoverage=40.1;identity=96.7;matches=357;mismatches=3;indels=9;unknowns=0;Target=comp150701_c0_seq1 921 553 .;locus=RLOC_00014512
Chr2	stalkie_big_nohaplotig	exon	7766121	7766480	96	-	.	Parent=comp150701_c0_seq1.mrna2
Chr2	gffcl	locus	7768476	7770199	.	+	.	ID=RLOC_00014513;geneIDs=comp154071_c1_seq1.path1;transcripts=comp154071_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7768476	7770199	.	+	.	ID=comp154071_c1_seq1.mrna1;geneID=comp154071_c1_seq1.path1;Name=comp154071_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1715;mismatches=6;indels=5;unknowns=0;Target=comp154071_c1_seq1 1723 1 .;CDS_Target=comp154071_c1_seq1 114 1 .;locus=RLOC_00014513
Chr2	stalkie_big_nohaplotig	exon	7768476	7770199	99	+	.	Parent=comp154071_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7768476	7768589	.	+	0	Parent=comp154071_c1_seq1.mrna1
Chr2	gffcl	locus	7770395	7770839	.	+	.	ID=RLOC_00014514;geneIDs=comp142063_c0_seq1.path1;transcripts=comp142063_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7770395	7770839	.	+	.	ID=comp142063_c0_seq1.mrna1;geneID=comp142063_c0_seq1.path1;Name=comp142063_c0_seq1;Dir=indeterminatecoverage=98.7;identity=98.9;matches=440;mismatches=5;indels=0;unknowns=0;Target=comp142063_c0_seq1 445 1 .;CDS_Target=comp142063_c0_seq1 59 3 .;locus=RLOC_00014514
Chr2	stalkie_big_nohaplotig	exon	7770395	7770839	98	+	.	Parent=comp142063_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7770397	7770453	.	+	0	Parent=comp142063_c0_seq1.mrna1
Chr2	gffcl	locus	7770883	7771160	.	+	.	ID=RLOC_00014515;geneIDs=comp142365_c0_seq1.path1;transcripts=comp142365_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7770883	7771160	.	+	.	ID=comp142365_c0_seq1.mrna1;geneID=comp142365_c0_seq1.path1;Name=comp142365_c0_seq1;Dir=indeterminatecoverage=85.0;identity=100.0;matches=278;mismatches=0;indels=0;unknowns=0;Target=comp142365_c0_seq1 278 1 .;CDS_Target=comp142365_c0_seq1 265 212 .;locus=RLOC_00014515
Chr2	stalkie_big_nohaplotig	exon	7770883	7771160	100	+	.	Parent=comp142365_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7771094	7771147	.	+	0	Parent=comp142365_c0_seq1.mrna1
Chr2	gffcl	locus	7771170	7771656	.	+	.	ID=RLOC_00014516;geneIDs=comp149800_c1_seq1.path1;transcripts=comp149800_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7771170	7771656	.	+	.	ID=comp149800_c1_seq1.mrna1;geneID=comp149800_c1_seq1.path1;Name=comp149800_c1_seq1;Dir=indeterminatecoverage=94.2;identity=97.9;matches=477;mismatches=10;indels=0;unknowns=0;Target=comp149800_c1_seq1 500 14 .;CDS_Target=comp149800_c1_seq1 404 339 .;locus=RLOC_00014516
Chr2	stalkie_big_nohaplotig	exon	7771170	7771656	97	+	.	Parent=comp149800_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7771495	7771560	.	+	0	Parent=comp149800_c1_seq1.mrna1
Chr2	gffcl	locus	7775488	7776417	.	+	.	ID=RLOC_00014517;geneIDs=comp156956_c0_seq1.path1;transcripts=comp156956_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7775488	7776417	.	+	.	ID=comp156956_c0_seq1.mrna1;geneID=comp156956_c0_seq1.path1;Name=comp156956_c0_seq1;Dir=indeterminatecoverage=75.5;identity=97.7;matches=909;mismatches=10;indels=11;unknowns=0;Target=comp156956_c0_seq1 1218 300 .;CDS_Target=comp156956_c0_seq1 1000 836 .;locus=RLOC_00014517
Chr2	stalkie_big_nohaplotig	exon	7775488	7776417	97	+	.	Parent=comp156956_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7776035	7776199	.	+	0	Parent=comp156956_c0_seq1.mrna1
Chr2	gffcl	locus	7804413	7805384	.	-	.	ID=RLOC_00014518;geneIDs=FBgn0034354.1.path1;transcripts=FBgn0034354.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7804413	7805384	.	-	.	ID=FBgn0034354.1.mrna1;geneID=FBgn0034354.1.path1;Name=FBgn0034354.1;Dir=sensecoverage=100.0;identity=99.7;matches=724;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014518
Chr2	stalkie_big_nohaplotig	exon	7804413	7804992	99	-	.	Parent=FBgn0034354.1.mrna1;Target=FBgn0034354.1 147 726 +
Chr2	stalkie_big_nohaplotig	exon	7805052	7805174	100	-	.	Parent=FBgn0034354.1.mrna1;Target=FBgn0034354.1 24 146 +
Chr2	stalkie_big_nohaplotig	exon	7805362	7805384	100	-	.	Parent=FBgn0034354.1.mrna1;Target=FBgn0034354.1 1 23 +
Chr2	stalkie_big_nohaplotig	CDS	7804413	7804992	.	-	1	Parent=FBgn0034354.1.mrna1;Target=FBgn0034354.1 147 726 +
Chr2	stalkie_big_nohaplotig	CDS	7805052	7805174	.	-	1	Parent=FBgn0034354.1.mrna1;Target=FBgn0034354.1 24 146 +
Chr2	stalkie_big_nohaplotig	CDS	7805362	7805384	.	-	0	Parent=FBgn0034354.1.mrna1;Target=FBgn0034354.1 1 23 +
Chr2	gffcl	locus	7920892	7922318	.	+	.	ID=RLOC_00014519;geneIDs=FBgn0034264.1.path1;transcripts=FBgn0034264.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7920892	7922318	.	+	.	ID=FBgn0034264.1.mrna1;geneID=FBgn0034264.1.path1;Name=FBgn0034264.1;Dir=sensecoverage=100.0;identity=98.9;matches=1157;mismatches=13;indels=0;unknowns=0;locus=RLOC_00014519
Chr2	stalkie_big_nohaplotig	exon	7920892	7920952	100	+	.	Parent=FBgn0034264.1.mrna1;Target=FBgn0034264.1 1 61 +
Chr2	stalkie_big_nohaplotig	exon	7921150	7922096	98	+	.	Parent=FBgn0034264.1.mrna1;Target=FBgn0034264.1 62 1008 +
Chr2	stalkie_big_nohaplotig	exon	7922157	7922318	99	+	.	Parent=FBgn0034264.1.mrna1;Target=FBgn0034264.1 1009 1170 +
Chr2	stalkie_big_nohaplotig	CDS	7920892	7920952	.	+	0	Parent=FBgn0034264.1.mrna1;Target=FBgn0034264.1 1 61 +
Chr2	stalkie_big_nohaplotig	CDS	7921150	7922096	.	+	2	Parent=FBgn0034264.1.mrna1;Target=FBgn0034264.1 62 1008 +
Chr2	stalkie_big_nohaplotig	CDS	7922157	7922318	.	+	0	Parent=FBgn0034264.1.mrna1;Target=FBgn0034264.1 1009 1170 +
Chr2	gffcl	locus	7923033	7925676	.	-	.	ID=RLOC_00014520;geneIDs=FBgn0034265.1.path1;transcripts=FBgn0034265.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7923033	7925676	.	-	.	ID=FBgn0034265.1.mrna1;geneID=FBgn0034265.1.path1;Name=FBgn0034265.1;Dir=sensecoverage=100.0;identity=99.7;matches=1250;mismatches=4;indels=0;unknowns=0;locus=RLOC_00014520
Chr2	stalkie_big_nohaplotig	exon	7923033	7923084	100	-	.	Parent=FBgn0034265.1.mrna1;Target=FBgn0034265.1 1203 1254 +
Chr2	stalkie_big_nohaplotig	exon	7924407	7924543	100	-	.	Parent=FBgn0034265.1.mrna1;Target=FBgn0034265.1 1066 1202 +
Chr2	stalkie_big_nohaplotig	exon	7924612	7925676	99	-	.	Parent=FBgn0034265.1.mrna1;Target=FBgn0034265.1 1 1065 +
Chr2	stalkie_big_nohaplotig	CDS	7923033	7923084	.	-	1	Parent=FBgn0034265.1.mrna1;Target=FBgn0034265.1 1203 1254 +
Chr2	stalkie_big_nohaplotig	CDS	7924407	7924543	.	-	0	Parent=FBgn0034265.1.mrna1;Target=FBgn0034265.1 1066 1202 +
Chr2	stalkie_big_nohaplotig	CDS	7924612	7925676	.	-	0	Parent=FBgn0034265.1.mrna1;Target=FBgn0034265.1 1 1065 +
Chr2	gffcl	locus	7926959	7927742	.	+	.	ID=RLOC_00014521;geneIDs=FBgn0026261.1.path1;transcripts=FBgn0026261.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7926959	7927742	.	+	.	ID=FBgn0026261.1.mrna1;geneID=FBgn0026261.1.path1;Name=FBgn0026261.1;Dir=sensecoverage=100.0;identity=99.7;matches=661;mismatches=1;indels=1;unknowns=0;locus=RLOC_00014521
Chr2	stalkie_big_nohaplotig	exon	7926959	7927182	99	+	.	Parent=FBgn0026261.1.mrna1;Target=FBgn0026261.1 1 224 +
Chr2	stalkie_big_nohaplotig	exon	7927246	7927379	100	+	.	Parent=FBgn0026261.1.mrna1;Target=FBgn0026261.1 225 358 +
Chr2	stalkie_big_nohaplotig	exon	7927439	7927742	99	+	.	Parent=FBgn0026261.1.mrna1;Target=FBgn0026261.1 359 663 +
Chr2	stalkie_big_nohaplotig	CDS	7926959	7927182	.	+	0	Parent=FBgn0026261.1.mrna1;Target=FBgn0026261.1 1 224 +
Chr2	stalkie_big_nohaplotig	CDS	7927246	7927379	.	+	1	Parent=FBgn0026261.1.mrna1;Target=FBgn0026261.1 225 358 +
Chr2	stalkie_big_nohaplotig	CDS	7927439	7927742	.	+	2	Parent=FBgn0026261.1.mrna1;Target=FBgn0026261.1 359 663 +
Chr2	gffcl	locus	7928086	7929618	.	-	.	ID=RLOC_00014522;geneIDs=FBgn0019949.1.path1;transcripts=FBgn0019949.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7928086	7929618	.	-	.	ID=FBgn0019949.1.mrna1;geneID=FBgn0019949.1.path1;Name=FBgn0019949.1;Dir=sensecoverage=100.0;identity=100.0;matches=1338;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014522
Chr2	stalkie_big_nohaplotig	exon	7928086	7928757	100	-	.	Parent=FBgn0019949.1.mrna1;Target=FBgn0019949.1 667 1338 +
Chr2	stalkie_big_nohaplotig	exon	7928825	7929082	100	-	.	Parent=FBgn0019949.1.mrna1;Target=FBgn0019949.1 409 666 +
Chr2	stalkie_big_nohaplotig	exon	7929150	7929234	100	-	.	Parent=FBgn0019949.1.mrna1;Target=FBgn0019949.1 324 408 +
Chr2	stalkie_big_nohaplotig	exon	7929296	7929618	100	-	.	Parent=FBgn0019949.1.mrna1;Target=FBgn0019949.1 1 323 +
Chr2	stalkie_big_nohaplotig	CDS	7928086	7928757	.	-	0	Parent=FBgn0019949.1.mrna1;Target=FBgn0019949.1 667 1338 +
Chr2	stalkie_big_nohaplotig	CDS	7928825	7929082	.	-	0	Parent=FBgn0019949.1.mrna1;Target=FBgn0019949.1 409 666 +
Chr2	stalkie_big_nohaplotig	CDS	7929150	7929234	.	-	1	Parent=FBgn0019949.1.mrna1;Target=FBgn0019949.1 324 408 +
Chr2	stalkie_big_nohaplotig	CDS	7929296	7929618	.	-	0	Parent=FBgn0019949.1.mrna1;Target=FBgn0019949.1 1 323 +
Chr2	gffcl	locus	7932809	7934047	.	-	.	ID=RLOC_00014523;geneIDs=FBgn0034750.1.path1;transcripts=FBgn0034750.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7932809	7934047	.	-	.	ID=FBgn0034750.1.mrna1;geneID=FBgn0034750.1.path1;Name=FBgn0034750.1;Dir=sensecoverage=100.0;identity=99.9;matches=1040;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014523
Chr2	stalkie_big_nohaplotig	exon	7932809	7933509	99	-	.	Parent=FBgn0034750.1.mrna1;Target=FBgn0034750.1 341 1041 +
Chr2	stalkie_big_nohaplotig	exon	7933590	7933840	100	-	.	Parent=FBgn0034750.1.mrna1;Target=FBgn0034750.1 90 340 +
Chr2	stalkie_big_nohaplotig	exon	7933959	7934047	100	-	.	Parent=FBgn0034750.1.mrna1;Target=FBgn0034750.1 1 89 +
Chr2	stalkie_big_nohaplotig	CDS	7932809	7933509	.	-	2	Parent=FBgn0034750.1.mrna1;Target=FBgn0034750.1 341 1041 +
Chr2	stalkie_big_nohaplotig	CDS	7933590	7933840	.	-	1	Parent=FBgn0034750.1.mrna1;Target=FBgn0034750.1 90 340 +
Chr2	stalkie_big_nohaplotig	CDS	7933959	7934047	.	-	0	Parent=FBgn0034750.1.mrna1;Target=FBgn0034750.1 1 89 +
Chr2	gffcl	locus	7935849	7936591	.	+	.	ID=RLOC_00014524;geneIDs=FBgn0034312.1.path1;transcripts=FBgn0034312.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7935849	7936591	.	+	.	ID=FBgn0034312.1.mrna1;geneID=FBgn0034312.1.path1;Name=FBgn0034312.1;Dir=indeterminatecoverage=96.6;identity=98.9;matches=735;mismatches=6;indels=2;unknowns=2;Target=FBgn0034312.1 745 1 .;CDS_Target=FBgn0034312.1 744 1 .;locus=RLOC_00014524
Chr2	stalkie_big_nohaplotig	exon	7935849	7936591	98	+	.	Parent=FBgn0034312.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7935849	7936590	.	+	0	Parent=FBgn0034312.1.mrna1
Chr2	gffcl	locus	7939562	7940306	.	+	.	ID=RLOC_00014525;geneIDs=comp130442_c0_seq1.path1;transcripts=comp130442_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7939562	7940306	.	+	.	ID=comp130442_c0_seq1.mrna1;geneID=comp130442_c0_seq1.path1;Name=comp130442_c0_seq1;Dir=indeterminatecoverage=97.5;identity=99.9;matches=744;mismatches=1;indels=0;unknowns=0;Target=comp130442_c0_seq1 746 2 .;CDS_Target=comp130442_c0_seq1 660 523 .;locus=RLOC_00014525
Chr2	stalkie_big_nohaplotig	exon	7939562	7940306	99	+	.	Parent=comp130442_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7940083	7940220	.	+	0	Parent=comp130442_c0_seq1.mrna1
Chr2	gffcl	locus	7940679	7940919	.	-	.	ID=RLOC_00014526;geneIDs=comp134938_c0_seq1.path1;transcripts=comp134938_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7940679	7940919	.	-	.	ID=comp134938_c0_seq1.mrna1;geneID=comp134938_c0_seq1.path1;Name=comp134938_c0_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=241;mismatches=0;indels=0;unknowns=0;Target=comp134938_c0_seq1 242 2 .;CDS_Target=comp134938_c0_seq1 237 148 .;locus=RLOC_00014526
Chr2	stalkie_big_nohaplotig	exon	7940679	7940919	100	-	.	Parent=comp134938_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7940684	7940773	.	-	0	Parent=comp134938_c0_seq1.mrna1
Chr2	gffcl	locus	7950979	7954680	.	-	.	ID=RLOC_00014528;geneIDs=FBgn0002567.1.path1,comp147254_c0_seq1.path1;transcripts=FBgn0002567.1.mrna1,comp147254_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7950979	7954680	.	-	.	ID=FBgn0002567.1.mrna1;geneID=FBgn0002567.1.path1;Name=FBgn0002567.1;Dir=sensecoverage=100.0;identity=99.1;matches=2034;mismatches=12;indels=6;unknowns=0;locus=RLOC_00014528
Chr2	stalkie_big_nohaplotig	exon	7950979	7951092	98	-	.	Parent=FBgn0002567.1.mrna1;Target=FBgn0002567.1 1933 2046 +
Chr2	stalkie_big_nohaplotig	exon	7951956	7952099	100	-	.	Parent=FBgn0002567.1.mrna1;Target=FBgn0002567.1 1789 1932 +
Chr2	stalkie_big_nohaplotig	exon	7952229	7952627	100	-	.	Parent=FBgn0002567.1.mrna1;Target=FBgn0002567.1 1390 1788 +
Chr2	stalkie_big_nohaplotig	exon	7953286	7954680	98	-	.	Parent=FBgn0002567.1.mrna1;Target=FBgn0002567.1 1 1389 +
Chr2	stalkie_big_nohaplotig	CDS	7950979	7951092	.	-	0	Parent=FBgn0002567.1.mrna1;Target=FBgn0002567.1 1933 2046 +
Chr2	stalkie_big_nohaplotig	CDS	7951956	7952099	.	-	0	Parent=FBgn0002567.1.mrna1;Target=FBgn0002567.1 1789 1932 +
Chr2	stalkie_big_nohaplotig	CDS	7952229	7952627	.	-	0	Parent=FBgn0002567.1.mrna1;Target=FBgn0002567.1 1390 1788 +
Chr2	stalkie_big_nohaplotig	CDS	7953286	7954680	.	-	0	Parent=FBgn0002567.1.mrna1;Target=FBgn0002567.1 1 1389 +
Chr2	stalkie_big_nohaplotig	mRNA	7951188	7951979	.	-	.	ID=comp147254_c0_seq1.mrna1;geneID=comp147254_c0_seq1.path1;Name=comp147254_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=778;mismatches=12;indels=2;unknowns=0;Target=comp147254_c0_seq1 790 1 .;CDS_Target=comp147254_c0_seq1 462 361 .;locus=RLOC_00014528
Chr2	stalkie_big_nohaplotig	exon	7951188	7951979	98	-	.	Parent=comp147254_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7951516	7951617	.	-	0	Parent=comp147254_c0_seq1.mrna1
Chr2	gffcl	locus	7956783	7957104	.	+	.	ID=RLOC_00014529;geneIDs=comp149962_c0_seq1.path1;transcripts=comp149962_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7956783	7957104	.	+	.	ID=comp149962_c0_seq1.mrna1;geneID=comp149962_c0_seq1.path1;Name=comp149962_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=318;mismatches=4;indels=1;unknowns=0;Target=comp149962_c0_seq1 323 1 .;CDS_Target=comp149962_c0_seq1 274 161 .;locus=RLOC_00014529
Chr2	stalkie_big_nohaplotig	exon	7956783	7957104	98	+	.	Parent=comp149962_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7956943	7957055	.	+	0	Parent=comp149962_c0_seq1.mrna1
Chr2	gffcl	locus	7976222	7977697	.	-	.	ID=RLOC_00014530;geneIDs=comp665872_c0_seq1.path1;transcripts=comp665872_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7976222	7977697	.	-	.	ID=comp665872_c0_seq1.mrna1;geneID=comp665872_c0_seq1.path1;Name=comp665872_c0_seq1;Dir=indeterminatecoverage=99.9;identity=94.7;matches=1404;mismatches=34;indels=44;unknowns=0;Target=comp665872_c0_seq1 1142 993 .;locus=RLOC_00014530
Chr2	stalkie_big_nohaplotig	exon	7976222	7976829	99	-	.	Parent=comp665872_c0_seq1.mrna1;Target=comp665872_c0_seq1 1504 897 .
Chr2	stalkie_big_nohaplotig	exon	7976868	7977697	91	-	.	Parent=comp665872_c0_seq1.mrna1;Target=comp665872_c0_seq1 875 2 .
Chr2	stalkie_big_nohaplotig	CDS	7976584	7976733	.	-	0	Parent=comp665872_c0_seq1.mrna1
Chr2	gffcl	locus	7979226	7980225	.	+	.	ID=RLOC_00014531;geneIDs=comp156777_c0_seq1.path1;transcripts=comp156777_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7979226	7980225	.	+	.	ID=comp156777_c0_seq1.mrna1;geneID=comp156777_c0_seq1.path1;Name=comp156777_c0_seq1;Dir=indeterminatecoverage=100.0;identity=87.6;matches=979;mismatches=19;indels=120;unknowns=0;Target=comp156777_c0_seq1 1116 1 .;CDS_Target=comp156777_c0_seq1 46 2 .;locus=RLOC_00014531
Chr2	stalkie_big_nohaplotig	exon	7979226	7980225	87	+	.	Parent=comp156777_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7979227	7979272	.	+	0	Parent=comp156777_c0_seq1.mrna1
Chr2	gffcl	locus	7981049	7981331	.	-	.	ID=RLOC_00014532;geneIDs=comp136287_c0_seq1.path1;transcripts=comp136287_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7981049	7981331	.	-	.	ID=comp136287_c0_seq1.mrna1;geneID=comp136287_c0_seq1.path1;Name=comp136287_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.9;matches=281;mismatches=2;indels=1;unknowns=0;Target=comp136287_c0_seq1 284 1 .;CDS_Target=comp136287_c0_seq1 95 45 .;locus=RLOC_00014532
Chr2	stalkie_big_nohaplotig	exon	7981049	7981331	98	-	.	Parent=comp136287_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	7981238	7981287	.	-	0	Parent=comp136287_c0_seq1.mrna1
Chr2	gffcl	locus	7990850	8002489	.	-	.	ID=RLOC_00014533;geneIDs=FBgn0033391.1.path1;transcripts=FBgn0033391.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7990850	8002489	.	-	.	ID=FBgn0033391.1.mrna1;geneID=FBgn0033391.1.path1;Name=FBgn0033391.1;Dir=sensecoverage=100.0;identity=99.9;matches=980;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014533
Chr2	stalkie_big_nohaplotig	exon	7990850	7991098	100	-	.	Parent=FBgn0033391.1.mrna1;Target=FBgn0033391.1 733 981 +
Chr2	stalkie_big_nohaplotig	exon	7995138	7995251	100	-	.	Parent=FBgn0033391.1.mrna1;Target=FBgn0033391.1 619 732 +
Chr2	stalkie_big_nohaplotig	exon	7995321	7995582	99	-	.	Parent=FBgn0033391.1.mrna1;Target=FBgn0033391.1 357 618 +
Chr2	stalkie_big_nohaplotig	exon	7995661	7995814	100	-	.	Parent=FBgn0033391.1.mrna1;Target=FBgn0033391.1 203 356 +
Chr2	stalkie_big_nohaplotig	exon	8002288	8002489	100	-	.	Parent=FBgn0033391.1.mrna1;Target=FBgn0033391.1 1 202 +
Chr2	stalkie_big_nohaplotig	CDS	7990850	7991098	.	-	0	Parent=FBgn0033391.1.mrna1;Target=FBgn0033391.1 733 981 +
Chr2	stalkie_big_nohaplotig	CDS	7995138	7995251	.	-	0	Parent=FBgn0033391.1.mrna1;Target=FBgn0033391.1 619 732 +
Chr2	stalkie_big_nohaplotig	CDS	7995321	7995582	.	-	1	Parent=FBgn0033391.1.mrna1;Target=FBgn0033391.1 357 618 +
Chr2	stalkie_big_nohaplotig	CDS	7995661	7995814	.	-	2	Parent=FBgn0033391.1.mrna1;Target=FBgn0033391.1 203 356 +
Chr2	stalkie_big_nohaplotig	CDS	8002288	8002489	.	-	0	Parent=FBgn0033391.1.mrna1;Target=FBgn0033391.1 1 202 +
Chr2	gffcl	locus	7997248	7999479	.	+	.	ID=RLOC_00014534;geneIDs=comp148522_c1_seq1.path1;transcripts=comp148522_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	7997248	7999479	.	+	.	ID=comp148522_c1_seq1.mrna1;geneID=comp148522_c1_seq1.path1;Name=comp148522_c1_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=798;mismatches=7;indels=2;unknowns=0;Target=comp148522_c1_seq1 101 232 .;locus=RLOC_00014534
Chr2	stalkie_big_nohaplotig	exon	7997248	7997398	96	+	.	Parent=comp148522_c1_seq1.mrna1;Target=comp148522_c1_seq1 655 806 -
Chr2	stalkie_big_nohaplotig	exon	7998825	7999479	99	+	.	Parent=comp148522_c1_seq1.mrna1;Target=comp148522_c1_seq1 1 654 -
Chr2	stalkie_big_nohaplotig	CDS	7999248	7999379	.	+	0	Parent=comp148522_c1_seq1.mrna1
Chr2	gffcl	locus	8004806	8005048	.	+	.	ID=RLOC_00014535;geneIDs=comp486390_c0_seq1.path1;transcripts=comp486390_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8004806	8005048	.	+	.	ID=comp486390_c0_seq1.mrna1;geneID=comp486390_c0_seq1.path1;Name=comp486390_c0_seq1;Dir=indeterminatecoverage=94.5;identity=95.5;matches=232;mismatches=7;indels=4;unknowns=0;Target=comp486390_c0_seq1 253 15 .;CDS_Target=comp486390_c0_seq1 115 17 .;locus=RLOC_00014535
Chr2	stalkie_big_nohaplotig	exon	8004806	8005048	95	+	.	Parent=comp486390_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	8004808	8004906	.	+	0	Parent=comp486390_c0_seq1.mrna1
Chr2	gffcl	locus	8005969	8015527	.	.	.	ID=RLOC_00014536;geneIDs=FBgn0033109.1.path1,comp85678_c0_seq1.path1;transcripts=FBgn0033109.1.mrna1,comp85678_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8005969	8015527	.	-	.	ID=FBgn0033109.1.mrna1;geneID=FBgn0033109.1.path1;Name=FBgn0033109.1;Dir=sensecoverage=100.0;identity=99.9;matches=1603;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014536
Chr2	stalkie_big_nohaplotig	exon	8005969	8006220	99	-	.	Parent=FBgn0033109.1.mrna1;Target=FBgn0033109.1 1354 1605 +
Chr2	stalkie_big_nohaplotig	exon	8006300	8006473	100	-	.	Parent=FBgn0033109.1.mrna1;Target=FBgn0033109.1 1180 1353 +
Chr2	stalkie_big_nohaplotig	exon	8009566	8009859	100	-	.	Parent=FBgn0033109.1.mrna1;Target=FBgn0033109.1 886 1179 +
Chr2	stalkie_big_nohaplotig	exon	8009931	8010344	100	-	.	Parent=FBgn0033109.1.mrna1;Target=FBgn0033109.1 472 885 +
Chr2	stalkie_big_nohaplotig	exon	8010395	8010661	99	-	.	Parent=FBgn0033109.1.mrna1;Target=FBgn0033109.1 205 471 +
Chr2	stalkie_big_nohaplotig	exon	8015324	8015527	100	-	.	Parent=FBgn0033109.1.mrna1;Target=FBgn0033109.1 1 204 +
Chr2	stalkie_big_nohaplotig	CDS	8005969	8006220	.	-	0	Parent=FBgn0033109.1.mrna1;Target=FBgn0033109.1 1354 1605 +
Chr2	stalkie_big_nohaplotig	CDS	8006300	8006473	.	-	0	Parent=FBgn0033109.1.mrna1;Target=FBgn0033109.1 1180 1353 +
Chr2	stalkie_big_nohaplotig	CDS	8009566	8009859	.	-	0	Parent=FBgn0033109.1.mrna1;Target=FBgn0033109.1 886 1179 +
Chr2	stalkie_big_nohaplotig	CDS	8009931	8010344	.	-	0	Parent=FBgn0033109.1.mrna1;Target=FBgn0033109.1 472 885 +
Chr2	stalkie_big_nohaplotig	CDS	8010395	8010661	.	-	0	Parent=FBgn0033109.1.mrna1;Target=FBgn0033109.1 205 471 +
Chr2	stalkie_big_nohaplotig	CDS	8015324	8015527	.	-	0	Parent=FBgn0033109.1.mrna1;Target=FBgn0033109.1 1 204 +
Chr2	stalkie_big_nohaplotig	mRNA	8006469	8006843	.	+	.	ID=comp85678_c0_seq1.mrna1;geneID=comp85678_c0_seq1.path1;Name=comp85678_c0_seq1;Dir=indeterminatecoverage=86.8;identity=98.7;matches=370;mismatches=5;indels=0;unknowns=0;Target=comp85678_c0_seq1 375 1 .;CDS_Target=comp85678_c0_seq1 113 3 .;locus=RLOC_00014536
Chr2	stalkie_big_nohaplotig	exon	8006469	8006843	98	+	.	Parent=comp85678_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	8006471	8006581	.	+	0	Parent=comp85678_c0_seq1.mrna1
Chr2	gffcl	locus	8010887	8011313	.	+	.	ID=RLOC_00014537;geneIDs=comp135160_c0_seq1.path1;transcripts=comp135160_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8010887	8011313	.	+	.	ID=comp135160_c0_seq1.mrna1;geneID=comp135160_c0_seq1.path1;Name=comp135160_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.8;matches=426;mismatches=1;indels=0;unknowns=0;Target=comp135160_c0_seq1 429 3 .;CDS_Target=comp135160_c0_seq1 357 142 .;locus=RLOC_00014537
Chr2	stalkie_big_nohaplotig	exon	8010887	8011313	99	+	.	Parent=comp135160_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	8011026	8011241	.	+	0	Parent=comp135160_c0_seq1.mrna1
Chr2	gffcl	locus	8026010	8027179	.	+	.	ID=RLOC_00014538;geneIDs=comp148074_c0_seq1.path1;transcripts=comp148074_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8026010	8027179	.	+	.	ID=comp148074_c0_seq1.mrna1;geneID=comp148074_c0_seq1.path1;Name=comp148074_c0_seq1;Dir=antisensecoverage=99.9;identity=99.3;matches=957;mismatches=6;indels=1;unknowns=0;locus=RLOC_00014538
Chr2	stalkie_big_nohaplotig	exon	8026010	8026601	98	+	.	Parent=comp148074_c0_seq1.mrna1;Target=comp148074_c0_seq1 373 964 -
Chr2	stalkie_big_nohaplotig	exon	8026655	8026785	99	+	.	Parent=comp148074_c0_seq1.mrna1;Target=comp148074_c0_seq1 241 372 -
Chr2	stalkie_big_nohaplotig	exon	8026940	8027179	100	+	.	Parent=comp148074_c0_seq1.mrna1;Target=comp148074_c0_seq1 1 240 -
Chr2	stalkie_big_nohaplotig	CDS	8026517	8026601	.	+	0	Parent=comp148074_c0_seq1.mrna1;Target=comp148074_c0_seq1 373 457 .
Chr2	stalkie_big_nohaplotig	CDS	8026655	8026785	.	+	2	Parent=comp148074_c0_seq1.mrna1;Target=comp148074_c0_seq1 241 372 .
Chr2	stalkie_big_nohaplotig	CDS	8026940	8026950	.	+	0	Parent=comp148074_c0_seq1.mrna1;Target=comp148074_c0_seq1 230 240 .
Chr2	gffcl	locus	8031538	8032287	.	+	.	ID=RLOC_00014539;geneIDs=comp147671_c0_seq1.path1;transcripts=comp147671_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8031538	8032287	.	+	.	ID=comp147671_c0_seq1.mrna1;geneID=comp147671_c0_seq1.path1;Name=comp147671_c0_seq1;Dir=antisensecoverage=100.0;identity=98.8;matches=513;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014539
Chr2	stalkie_big_nohaplotig	exon	8031538	8031693	98	+	.	Parent=comp147671_c0_seq1.mrna1;Target=comp147671_c0_seq1 364 519 -
Chr2	stalkie_big_nohaplotig	exon	8031783	8031904	100	+	.	Parent=comp147671_c0_seq1.mrna1;Target=comp147671_c0_seq1 242 363 -
Chr2	stalkie_big_nohaplotig	exon	8031959	8032078	96	+	.	Parent=comp147671_c0_seq1.mrna1;Target=comp147671_c0_seq1 122 241 -
Chr2	stalkie_big_nohaplotig	exon	8032167	8032287	100	+	.	Parent=comp147671_c0_seq1.mrna1;Target=comp147671_c0_seq1 1 121 -
Chr2	stalkie_big_nohaplotig	CDS	8031540	8031693	.	+	0	Parent=comp147671_c0_seq1.mrna1;Target=comp147671_c0_seq1 364 517 .
Chr2	stalkie_big_nohaplotig	CDS	8031783	8031904	.	+	2	Parent=comp147671_c0_seq1.mrna1;Target=comp147671_c0_seq1 242 363 .
Chr2	stalkie_big_nohaplotig	CDS	8031959	8032078	.	+	0	Parent=comp147671_c0_seq1.mrna1;Target=comp147671_c0_seq1 122 241 .
Chr2	stalkie_big_nohaplotig	CDS	8032167	8032286	.	+	0	Parent=comp147671_c0_seq1.mrna1;Target=comp147671_c0_seq1 2 121 .
Chr2	gffcl	locus	8080128	8093319	.	+	.	ID=RLOC_00014540;geneIDs=FBgn0010316.1.path1,comp151227_c0_seq1.path1;transcripts=comp151227_c0_seq1.mrna1,FBgn0010316.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8080128	8093319	.	+	.	ID=comp151227_c0_seq1.mrna1;geneID=comp151227_c0_seq1.path1;Name=comp151227_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=2796;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014540
Chr2	stalkie_big_nohaplotig	exon	8080128	8081210	100	+	.	Parent=comp151227_c0_seq1.mrna1;Target=comp151227_c0_seq1 1716 2798 -
Chr2	stalkie_big_nohaplotig	exon	8085143	8085164	100	+	.	Parent=comp151227_c0_seq1.mrna1;Target=comp151227_c0_seq1 1694 1715 -
Chr2	stalkie_big_nohaplotig	exon	8086268	8086671	100	+	.	Parent=comp151227_c0_seq1.mrna1;Target=comp151227_c0_seq1 1290 1693 -
Chr2	stalkie_big_nohaplotig	exon	8092031	8093319	99	+	.	Parent=comp151227_c0_seq1.mrna1;Target=comp151227_c0_seq1 1 1289 -
Chr2	stalkie_big_nohaplotig	CDS	8081078	8081210	.	+	0	Parent=comp151227_c0_seq1.mrna1;Target=comp151227_c0_seq1 1716 1848 .
Chr2	stalkie_big_nohaplotig	CDS	8085143	8085164	.	+	2	Parent=comp151227_c0_seq1.mrna1;Target=comp151227_c0_seq1 1694 1715 .
Chr2	stalkie_big_nohaplotig	CDS	8086268	8086671	.	+	1	Parent=comp151227_c0_seq1.mrna1;Target=comp151227_c0_seq1 1290 1693 .
Chr2	stalkie_big_nohaplotig	CDS	8092031	8092203	.	+	2	Parent=comp151227_c0_seq1.mrna1;Target=comp151227_c0_seq1 1117 1289 .
Chr2	stalkie_big_nohaplotig	mRNA	8081015	8092200	.	+	.	ID=FBgn0010316.1.mrna1;geneID=FBgn0010316.1.path1;Name=FBgn0010316.1;Dir=sensecoverage=100.0;identity=99.9;matches=791;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014540
Chr2	stalkie_big_nohaplotig	exon	8081015	8081232	99	+	.	Parent=FBgn0010316.1.mrna1;Target=FBgn0010316.1 1 218 +
Chr2	stalkie_big_nohaplotig	exon	8086268	8086671	100	+	.	Parent=FBgn0010316.1.mrna1;Target=FBgn0010316.1 219 622 +
Chr2	stalkie_big_nohaplotig	exon	8092031	8092200	100	+	.	Parent=FBgn0010316.1.mrna1;Target=FBgn0010316.1 623 792 +
Chr2	stalkie_big_nohaplotig	CDS	8081015	8081232	.	+	0	Parent=FBgn0010316.1.mrna1;Target=FBgn0010316.1 1 218 +
Chr2	stalkie_big_nohaplotig	CDS	8086268	8086671	.	+	1	Parent=FBgn0010316.1.mrna1;Target=FBgn0010316.1 219 622 +
Chr2	stalkie_big_nohaplotig	CDS	8092031	8092200	.	+	2	Parent=FBgn0010316.1.mrna1;Target=FBgn0010316.1 623 792 +
Chr2	gffcl	locus	8095174	8099802	.	-	.	ID=RLOC_00014541;geneIDs=comp154321_c0_seq1.path1;transcripts=comp154321_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8095174	8099802	.	-	.	ID=comp154321_c0_seq1.mrna1;geneID=comp154321_c0_seq1.path1;Name=comp154321_c0_seq1;Dir=antisensecoverage=99.1;identity=99.6;matches=3316;mismatches=9;indels=4;unknowns=0;locus=RLOC_00014541
Chr2	stalkie_big_nohaplotig	exon	8095174	8096788	99	-	.	Parent=comp154321_c0_seq1.mrna1;Target=comp154321_c0_seq1 11 1628 -
Chr2	stalkie_big_nohaplotig	exon	8097699	8097749	100	-	.	Parent=comp154321_c0_seq1.mrna1;Target=comp154321_c0_seq1 1629 1679 -
Chr2	stalkie_big_nohaplotig	exon	8097808	8098702	99	-	.	Parent=comp154321_c0_seq1.mrna1;Target=comp154321_c0_seq1 1680 2575 -
Chr2	stalkie_big_nohaplotig	exon	8098865	8098969	100	-	.	Parent=comp154321_c0_seq1.mrna1;Target=comp154321_c0_seq1 2576 2680 -
Chr2	stalkie_big_nohaplotig	exon	8099035	8099161	100	-	.	Parent=comp154321_c0_seq1.mrna1;Target=comp154321_c0_seq1 2681 2807 -
Chr2	stalkie_big_nohaplotig	exon	8099219	8099553	100	-	.	Parent=comp154321_c0_seq1.mrna1;Target=comp154321_c0_seq1 2808 3142 -
Chr2	stalkie_big_nohaplotig	exon	8099606	8099802	100	-	.	Parent=comp154321_c0_seq1.mrna1;Target=comp154321_c0_seq1 3143 3339 -
Chr2	stalkie_big_nohaplotig	CDS	8097962	8098702	.	-	1	Parent=comp154321_c0_seq1.mrna1;Target=comp154321_c0_seq1 1834 2575 .
Chr2	stalkie_big_nohaplotig	CDS	8098865	8098969	.	-	1	Parent=comp154321_c0_seq1.mrna1;Target=comp154321_c0_seq1 2576 2680 .
Chr2	stalkie_big_nohaplotig	CDS	8099035	8099161	.	-	2	Parent=comp154321_c0_seq1.mrna1;Target=comp154321_c0_seq1 2681 2807 .
Chr2	stalkie_big_nohaplotig	CDS	8099219	8099553	.	-	1	Parent=comp154321_c0_seq1.mrna1;Target=comp154321_c0_seq1 2808 3142 .
Chr2	stalkie_big_nohaplotig	CDS	8099606	8099688	.	-	0	Parent=comp154321_c0_seq1.mrna1;Target=comp154321_c0_seq1 3143 3225 .
Chr2	gffcl	locus	8100662	8101755	.	+	.	ID=RLOC_00014542;geneIDs=comp76549_c0_seq1.path1;transcripts=comp76549_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8100662	8101755	.	+	.	ID=comp76549_c0_seq1.mrna1;geneID=comp76549_c0_seq1.path1;Name=comp76549_c0_seq1;Dir=antisensecoverage=98.9;identity=99.0;matches=1025;mismatches=6;indels=4;unknowns=0;locus=RLOC_00014542
Chr2	stalkie_big_nohaplotig	exon	8100662	8100814	100	+	.	Parent=comp76549_c0_seq1.mrna1;Target=comp76549_c0_seq1 882 1034 -
Chr2	stalkie_big_nohaplotig	exon	8100877	8101755	98	+	.	Parent=comp76549_c0_seq1.mrna1;Target=comp76549_c0_seq1 1 881 -
Chr2	stalkie_big_nohaplotig	CDS	8100719	8100814	.	+	0	Parent=comp76549_c0_seq1.mrna1;Target=comp76549_c0_seq1 882 977 .
Chr2	stalkie_big_nohaplotig	CDS	8100877	8100966	.	+	0	Parent=comp76549_c0_seq1.mrna1;Target=comp76549_c0_seq1 792 881 .
Chr2	gffcl	locus	8102489	8103343	.	-	.	ID=RLOC_00014543;geneIDs=FBgn0016701.1.path1;transcripts=FBgn0016701.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8102489	8103343	.	-	.	ID=FBgn0016701.1.mrna1;geneID=FBgn0016701.1.path1;Name=FBgn0016701.1;Dir=sensecoverage=100.0;identity=99.8;matches=647;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014543
Chr2	stalkie_big_nohaplotig	exon	8102489	8102697	100	-	.	Parent=FBgn0016701.1.mrna1;Target=FBgn0016701.1 440 648 +
Chr2	stalkie_big_nohaplotig	exon	8102780	8103112	99	-	.	Parent=FBgn0016701.1.mrna1;Target=FBgn0016701.1 107 439 +
Chr2	stalkie_big_nohaplotig	exon	8103181	8103261	100	-	.	Parent=FBgn0016701.1.mrna1;Target=FBgn0016701.1 26 106 +
Chr2	stalkie_big_nohaplotig	exon	8103319	8103343	100	-	.	Parent=FBgn0016701.1.mrna1;Target=FBgn0016701.1 1 25 +
Chr2	stalkie_big_nohaplotig	CDS	8102489	8102697	.	-	2	Parent=FBgn0016701.1.mrna1;Target=FBgn0016701.1 440 648 +
Chr2	stalkie_big_nohaplotig	CDS	8102780	8103112	.	-	2	Parent=FBgn0016701.1.mrna1;Target=FBgn0016701.1 107 439 +
Chr2	stalkie_big_nohaplotig	CDS	8103181	8103261	.	-	2	Parent=FBgn0016701.1.mrna1;Target=FBgn0016701.1 26 106 +
Chr2	stalkie_big_nohaplotig	CDS	8103319	8103343	.	-	0	Parent=FBgn0016701.1.mrna1;Target=FBgn0016701.1 1 25 +
Chr2	gffcl	locus	8104125	8104585	.	+	.	ID=RLOC_00014544;geneIDs=comp148257_c0_seq1.path1;transcripts=comp148257_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8104125	8104585	.	+	.	ID=comp148257_c0_seq1.mrna1;geneID=comp148257_c0_seq1.path1;Name=comp148257_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.6;matches=459;mismatches=2;indels=0;unknowns=0;Target=comp148257_c0_seq1 461 1 .;CDS_Target=comp148257_c0_seq1 461 408 .;locus=RLOC_00014544
Chr2	stalkie_big_nohaplotig	exon	8104125	8104585	99	+	.	Parent=comp148257_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	8104532	8104585	.	+	0	Parent=comp148257_c0_seq1.mrna1
Chr2	gffcl	locus	8105408	8107671	.	+	.	ID=RLOC_00014545;geneIDs=FBgn0034527.1.path1;transcripts=FBgn0034527.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8105408	8107671	.	+	.	ID=FBgn0034527.1.mrna1;geneID=FBgn0034527.1.path1;Name=FBgn0034527.1;Dir=sensecoverage=100.0;identity=99.9;matches=1607;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014545
Chr2	stalkie_big_nohaplotig	exon	8105408	8105647	99	+	.	Parent=FBgn0034527.1.mrna1;Target=FBgn0034527.1 1 240 +
Chr2	stalkie_big_nohaplotig	exon	8105709	8105982	100	+	.	Parent=FBgn0034527.1.mrna1;Target=FBgn0034527.1 241 514 +
Chr2	stalkie_big_nohaplotig	exon	8106047	8106193	100	+	.	Parent=FBgn0034527.1.mrna1;Target=FBgn0034527.1 515 661 +
Chr2	stalkie_big_nohaplotig	exon	8106255	8106785	100	+	.	Parent=FBgn0034527.1.mrna1;Target=FBgn0034527.1 662 1192 +
Chr2	stalkie_big_nohaplotig	exon	8106838	8106990	100	+	.	Parent=FBgn0034527.1.mrna1;Target=FBgn0034527.1 1193 1345 +
Chr2	stalkie_big_nohaplotig	exon	8107051	8107157	100	+	.	Parent=FBgn0034527.1.mrna1;Target=FBgn0034527.1 1346 1452 +
Chr2	stalkie_big_nohaplotig	exon	8107225	8107365	100	+	.	Parent=FBgn0034527.1.mrna1;Target=FBgn0034527.1 1453 1593 +
Chr2	stalkie_big_nohaplotig	exon	8107657	8107671	100	+	.	Parent=FBgn0034527.1.mrna1;Target=FBgn0034527.1 1594 1608 +
Chr2	stalkie_big_nohaplotig	CDS	8105408	8105647	.	+	0	Parent=FBgn0034527.1.mrna1;Target=FBgn0034527.1 1 240 +
Chr2	stalkie_big_nohaplotig	CDS	8105709	8105982	.	+	0	Parent=FBgn0034527.1.mrna1;Target=FBgn0034527.1 241 514 +
Chr2	stalkie_big_nohaplotig	CDS	8106047	8106193	.	+	2	Parent=FBgn0034527.1.mrna1;Target=FBgn0034527.1 515 661 +
Chr2	stalkie_big_nohaplotig	CDS	8106255	8106785	.	+	2	Parent=FBgn0034527.1.mrna1;Target=FBgn0034527.1 662 1192 +
Chr2	stalkie_big_nohaplotig	CDS	8106838	8106990	.	+	2	Parent=FBgn0034527.1.mrna1;Target=FBgn0034527.1 1193 1345 +
Chr2	stalkie_big_nohaplotig	CDS	8107051	8107157	.	+	2	Parent=FBgn0034527.1.mrna1;Target=FBgn0034527.1 1346 1452 +
Chr2	stalkie_big_nohaplotig	CDS	8107225	8107365	.	+	0	Parent=FBgn0034527.1.mrna1;Target=FBgn0034527.1 1453 1593 +
Chr2	stalkie_big_nohaplotig	CDS	8107657	8107671	.	+	0	Parent=FBgn0034527.1.mrna1;Target=FBgn0034527.1 1594 1608 +
Chr2	gffcl	locus	8108372	8116153	.	-	.	ID=RLOC_00014546;geneIDs=FBgn0034246.1.path1;transcripts=FBgn0034246.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8108372	8116153	.	-	.	ID=FBgn0034246.1.mrna1;geneID=FBgn0034246.1.path1;Name=FBgn0034246.1;Dir=sensecoverage=100.0;identity=99.8;matches=5025;mismatches=9;indels=0;unknowns=0;locus=RLOC_00014546
Chr2	stalkie_big_nohaplotig	exon	8108372	8110261	99	-	.	Parent=FBgn0034246.1.mrna1;Target=FBgn0034246.1 3145 5034 +
Chr2	stalkie_big_nohaplotig	exon	8110318	8111411	99	-	.	Parent=FBgn0034246.1.mrna1;Target=FBgn0034246.1 2051 3144 +
Chr2	stalkie_big_nohaplotig	exon	8112648	8112822	100	-	.	Parent=FBgn0034246.1.mrna1;Target=FBgn0034246.1 1876 2050 +
Chr2	stalkie_big_nohaplotig	exon	8112874	8113401	100	-	.	Parent=FBgn0034246.1.mrna1;Target=FBgn0034246.1 1348 1875 +
Chr2	stalkie_big_nohaplotig	exon	8113783	8114485	100	-	.	Parent=FBgn0034246.1.mrna1;Target=FBgn0034246.1 645 1347 +
Chr2	stalkie_big_nohaplotig	exon	8114555	8114862	99	-	.	Parent=FBgn0034246.1.mrna1;Target=FBgn0034246.1 337 644 +
Chr2	stalkie_big_nohaplotig	exon	8114919	8115096	100	-	.	Parent=FBgn0034246.1.mrna1;Target=FBgn0034246.1 159 336 +
Chr2	stalkie_big_nohaplotig	exon	8115941	8116080	100	-	.	Parent=FBgn0034246.1.mrna1;Target=FBgn0034246.1 19 158 +
Chr2	stalkie_big_nohaplotig	exon	8116136	8116153	100	-	.	Parent=FBgn0034246.1.mrna1;Target=FBgn0034246.1 1 18 +
Chr2	stalkie_big_nohaplotig	CDS	8108372	8110261	.	-	0	Parent=FBgn0034246.1.mrna1;Target=FBgn0034246.1 3145 5034 +
Chr2	stalkie_big_nohaplotig	CDS	8110318	8111411	.	-	2	Parent=FBgn0034246.1.mrna1;Target=FBgn0034246.1 2051 3144 +
Chr2	stalkie_big_nohaplotig	CDS	8112648	8112822	.	-	0	Parent=FBgn0034246.1.mrna1;Target=FBgn0034246.1 1876 2050 +
Chr2	stalkie_big_nohaplotig	CDS	8112874	8113401	.	-	0	Parent=FBgn0034246.1.mrna1;Target=FBgn0034246.1 1348 1875 +
Chr2	stalkie_big_nohaplotig	CDS	8113783	8114485	.	-	1	Parent=FBgn0034246.1.mrna1;Target=FBgn0034246.1 645 1347 +
Chr2	stalkie_big_nohaplotig	CDS	8114555	8114862	.	-	0	Parent=FBgn0034246.1.mrna1;Target=FBgn0034246.1 337 644 +
Chr2	stalkie_big_nohaplotig	CDS	8114919	8115096	.	-	1	Parent=FBgn0034246.1.mrna1;Target=FBgn0034246.1 159 336 +
Chr2	stalkie_big_nohaplotig	CDS	8115941	8116080	.	-	0	Parent=FBgn0034246.1.mrna1;Target=FBgn0034246.1 19 158 +
Chr2	stalkie_big_nohaplotig	CDS	8116136	8116153	.	-	0	Parent=FBgn0034246.1.mrna1;Target=FBgn0034246.1 1 18 +
Chr2	gffcl	locus	8117706	8118953	.	-	.	ID=RLOC_00014547;geneIDs=ORF1885.path1;transcripts=ORF1885.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8117706	8118953	.	-	.	ID=ORF1885.mrna1;geneID=ORF1885.path1;Name=ORF1885;Dir=sensecoverage=100.0;identity=100.0;matches=969;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014547
Chr2	stalkie_big_nohaplotig	exon	8117706	8117930	100	-	.	Parent=ORF1885.mrna1;Target=ORF1885 745 969 +
Chr2	stalkie_big_nohaplotig	exon	8118021	8118170	100	-	.	Parent=ORF1885.mrna1;Target=ORF1885 595 744 +
Chr2	stalkie_big_nohaplotig	exon	8118231	8118296	100	-	.	Parent=ORF1885.mrna1;Target=ORF1885 529 594 +
Chr2	stalkie_big_nohaplotig	exon	8118361	8118450	100	-	.	Parent=ORF1885.mrna1;Target=ORF1885 439 528 +
Chr2	stalkie_big_nohaplotig	exon	8118516	8118953	100	-	.	Parent=ORF1885.mrna1;Target=ORF1885 1 438 +
Chr2	stalkie_big_nohaplotig	CDS	8117706	8117930	.	-	0	Parent=ORF1885.mrna1;Target=ORF1885 745 969 +
Chr2	stalkie_big_nohaplotig	CDS	8118021	8118170	.	-	0	Parent=ORF1885.mrna1;Target=ORF1885 595 744 +
Chr2	stalkie_big_nohaplotig	CDS	8118231	8118296	.	-	0	Parent=ORF1885.mrna1;Target=ORF1885 529 594 +
Chr2	stalkie_big_nohaplotig	CDS	8118361	8118450	.	-	0	Parent=ORF1885.mrna1;Target=ORF1885 439 528 +
Chr2	stalkie_big_nohaplotig	CDS	8118516	8118953	.	-	0	Parent=ORF1885.mrna1;Target=ORF1885 1 438 +
Chr2	gffcl	locus	8120624	8122603	.	+	.	ID=RLOC_00014548;geneIDs=FBgn0033055.1.path1;transcripts=FBgn0033055.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8120624	8122603	.	+	.	ID=FBgn0033055.1.mrna1;geneID=FBgn0033055.1.path1;Name=FBgn0033055.1;Dir=sensecoverage=100.0;identity=100.0;matches=1575;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014548
Chr2	stalkie_big_nohaplotig	exon	8120624	8120725	100	+	.	Parent=FBgn0033055.1.mrna1;Target=FBgn0033055.1 1 102 +
Chr2	stalkie_big_nohaplotig	exon	8120785	8121257	100	+	.	Parent=FBgn0033055.1.mrna1;Target=FBgn0033055.1 103 575 +
Chr2	stalkie_big_nohaplotig	exon	8121360	8121578	100	+	.	Parent=FBgn0033055.1.mrna1;Target=FBgn0033055.1 576 794 +
Chr2	stalkie_big_nohaplotig	exon	8121644	8121845	100	+	.	Parent=FBgn0033055.1.mrna1;Target=FBgn0033055.1 795 996 +
Chr2	stalkie_big_nohaplotig	exon	8121908	8122187	100	+	.	Parent=FBgn0033055.1.mrna1;Target=FBgn0033055.1 997 1276 +
Chr2	stalkie_big_nohaplotig	exon	8122305	8122603	100	+	.	Parent=FBgn0033055.1.mrna1;Target=FBgn0033055.1 1277 1575 +
Chr2	stalkie_big_nohaplotig	CDS	8120624	8120725	.	+	0	Parent=FBgn0033055.1.mrna1;Target=FBgn0033055.1 1 102 +
Chr2	stalkie_big_nohaplotig	CDS	8120785	8121257	.	+	0	Parent=FBgn0033055.1.mrna1;Target=FBgn0033055.1 103 575 +
Chr2	stalkie_big_nohaplotig	CDS	8121360	8121578	.	+	1	Parent=FBgn0033055.1.mrna1;Target=FBgn0033055.1 576 794 +
Chr2	stalkie_big_nohaplotig	CDS	8121644	8121845	.	+	1	Parent=FBgn0033055.1.mrna1;Target=FBgn0033055.1 795 996 +
Chr2	stalkie_big_nohaplotig	CDS	8121908	8122187	.	+	0	Parent=FBgn0033055.1.mrna1;Target=FBgn0033055.1 997 1276 +
Chr2	stalkie_big_nohaplotig	CDS	8122305	8122603	.	+	2	Parent=FBgn0033055.1.mrna1;Target=FBgn0033055.1 1277 1575 +
Chr2	gffcl	locus	8124665	8125075	.	+	.	ID=RLOC_00014549;geneIDs=FBgn0038107.1.path1;transcripts=FBgn0038107.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8124665	8125075	.	+	.	ID=FBgn0038107.1.mrna1;geneID=FBgn0038107.1.path1;Name=FBgn0038107.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=411;mismatches=0;indels=0;unknowns=0;Target=FBgn0038107.1 411 1 .;locus=RLOC_00014549
Chr2	stalkie_big_nohaplotig	exon	8124665	8125075	100	+	.	Parent=FBgn0038107.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	8124665	8125075	.	+	0	Parent=FBgn0038107.1.mrna1
Chr2	gffcl	locus	8125126	8126507	.	-	.	ID=RLOC_00014550;geneIDs=FBgn0038106.1.path1;transcripts=FBgn0038106.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8125126	8126507	.	-	.	ID=FBgn0038106.1.mrna1;geneID=FBgn0038106.1.path1;Name=FBgn0038106.1;Dir=sensecoverage=100.0;identity=99.5;matches=1137;mismatches=3;indels=3;unknowns=0;locus=RLOC_00014550
Chr2	stalkie_big_nohaplotig	exon	8125126	8125298	100	-	.	Parent=FBgn0038106.1.mrna1;Target=FBgn0038106.1 971 1143 +
Chr2	stalkie_big_nohaplotig	exon	8125370	8125547	100	-	.	Parent=FBgn0038106.1.mrna1;Target=FBgn0038106.1 793 970 +
Chr2	stalkie_big_nohaplotig	exon	8125664	8126188	100	-	.	Parent=FBgn0038106.1.mrna1;Target=FBgn0038106.1 268 792 +
Chr2	stalkie_big_nohaplotig	exon	8126244	8126507	97	-	.	Parent=FBgn0038106.1.mrna1;Target=FBgn0038106.1 1 267 +
Chr2	stalkie_big_nohaplotig	CDS	8125126	8125298	.	-	2	Parent=FBgn0038106.1.mrna1;Target=FBgn0038106.1 971 1143 +
Chr2	stalkie_big_nohaplotig	CDS	8125370	8125547	.	-	0	Parent=FBgn0038106.1.mrna1;Target=FBgn0038106.1 793 970 +
Chr2	stalkie_big_nohaplotig	CDS	8125664	8126188	.	-	0	Parent=FBgn0038106.1.mrna1;Target=FBgn0038106.1 268 792 +
Chr2	stalkie_big_nohaplotig	CDS	8126244	8126507	.	-	0	Parent=FBgn0038106.1.mrna1;Target=FBgn0038106.1 1 267 +
Chr2	gffcl	locus	8140703	8153540	.	+	.	ID=RLOC_00014551;geneIDs=FBgn0010414.1.path1;transcripts=FBgn0010414.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8140703	8153540	.	+	.	ID=FBgn0010414.1.mrna1;geneID=FBgn0010414.1.path1;Name=FBgn0010414.1;Dir=sensecoverage=100.0;identity=99.4;matches=1932;mismatches=8;indels=4;unknowns=0;Target=FBgn0010414.1 3 71 +;locus=RLOC_00014551
Chr2	stalkie_big_nohaplotig	exon	8140703	8140962	97	+	.	Parent=FBgn0010414.1.mrna1;Target=FBgn0010414.1 1 264 +
Chr2	stalkie_big_nohaplotig	exon	8141167	8141443	99	+	.	Parent=FBgn0010414.1.mrna1;Target=FBgn0010414.1 265 541 +
Chr2	stalkie_big_nohaplotig	exon	8145725	8145935	100	+	.	Parent=FBgn0010414.1.mrna1;Target=FBgn0010414.1 542 752 +
Chr2	stalkie_big_nohaplotig	exon	8146235	8146508	99	+	.	Parent=FBgn0010414.1.mrna1;Target=FBgn0010414.1 753 1026 +
Chr2	stalkie_big_nohaplotig	exon	8148774	8148952	100	+	.	Parent=FBgn0010414.1.mrna1;Target=FBgn0010414.1 1027 1205 +
Chr2	stalkie_big_nohaplotig	exon	8149016	8149310	100	+	.	Parent=FBgn0010414.1.mrna1;Target=FBgn0010414.1 1206 1500 +
Chr2	stalkie_big_nohaplotig	exon	8151554	8151754	100	+	.	Parent=FBgn0010414.1.mrna1;Target=FBgn0010414.1 1501 1701 +
Chr2	stalkie_big_nohaplotig	exon	8153298	8153540	98	+	.	Parent=FBgn0010414.1.mrna1;Target=FBgn0010414.1 1702 1944 +
Chr2	stalkie_big_nohaplotig	CDS	8140705	8140769	.	+	0	Parent=FBgn0010414.1.mrna1
Chr2	gffcl	locus	8158053	8158872	.	+	.	ID=RLOC_00014552;geneIDs=comp149317_c0_seq1.path1;transcripts=comp149317_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8158053	8158872	.	+	.	ID=comp149317_c0_seq1.mrna1;geneID=comp149317_c0_seq1.path1;Name=comp149317_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.5;matches=816;mismatches=4;indels=0;unknowns=0;Target=comp149317_c0_seq1 821 2 .;CDS_Target=comp149317_c0_seq1 633 388 .;locus=RLOC_00014552
Chr2	stalkie_big_nohaplotig	exon	8158053	8158872	99	+	.	Parent=comp149317_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	8158439	8158684	.	+	0	Parent=comp149317_c0_seq1.mrna1
Chr2	gffcl	locus	8161456	8163926	.	-	.	ID=RLOC_00014553;geneIDs=comp149844_c0_seq1.path1;transcripts=comp149844_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8161456	8163926	.	-	.	ID=comp149844_c0_seq1.mrna1;geneID=comp149844_c0_seq1.path1;Name=comp149844_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=2159;mismatches=20;indels=0;unknowns=0;Target=comp149844_c0_seq1 610 446 .;locus=RLOC_00014553
Chr2	stalkie_big_nohaplotig	exon	8161456	8161928	96	-	.	Parent=comp149844_c0_seq1.mrna1;Target=comp149844_c0_seq1 2195 1723 .
Chr2	stalkie_big_nohaplotig	exon	8162222	8163926	99	-	.	Parent=comp149844_c0_seq1.mrna1;Target=comp149844_c0_seq1 1705 1 .
Chr2	stalkie_big_nohaplotig	CDS	8163317	8163481	.	-	0	Parent=comp149844_c0_seq1.mrna1
Chr2	gffcl	locus	8168676	8169559	.	-	.	ID=RLOC_00014554;geneIDs=comp146672_c0_seq1.path1;transcripts=comp146672_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8168676	8169559	.	-	.	ID=comp146672_c0_seq1.mrna1;geneID=comp146672_c0_seq1.path1;Name=comp146672_c0_seq1;Dir=indeterminatecoverage=95.6;identity=99.8;matches=883;mismatches=1;indels=1;unknowns=0;Target=comp146672_c0_seq1 926 42 .;CDS_Target=comp146672_c0_seq1 581 423 .;locus=RLOC_00014554
Chr2	stalkie_big_nohaplotig	exon	8168676	8169559	99	-	.	Parent=comp146672_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	8169021	8169179	.	-	0	Parent=comp146672_c0_seq1.mrna1
Chr2	gffcl	locus	8172791	8173168	.	-	.	ID=RLOC_00014555;geneIDs=comp138317_c2_seq1.path1;transcripts=comp138317_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8172791	8173168	.	-	.	ID=comp138317_c2_seq1.mrna1;geneID=comp138317_c2_seq1.path1;Name=comp138317_c2_seq1;Dir=indeterminatecoverage=55.8;identity=99.2;matches=375;mismatches=3;indels=0;unknowns=0;Target=comp138317_c2_seq1 378 1 .;CDS_Target=comp138317_c2_seq1 102 22 .;locus=RLOC_00014555
Chr2	stalkie_big_nohaplotig	exon	8172791	8173168	99	-	.	Parent=comp138317_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	8173067	8173147	.	-	0	Parent=comp138317_c2_seq1.mrna1
Chr2	gffcl	locus	8175724	8176914	.	+	.	ID=RLOC_00014556;geneIDs=FBgn0010228.1.path1;transcripts=FBgn0010228.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8175724	8176914	.	+	.	ID=FBgn0010228.1.mrna1;geneID=FBgn0010228.1.path1;Name=FBgn0010228.1;Dir=sensecoverage=100.0;identity=100.0;matches=354;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014556
Chr2	stalkie_big_nohaplotig	exon	8175724	8175897	100	+	.	Parent=FBgn0010228.1.mrna1;Target=FBgn0010228.1 1 174 +
Chr2	stalkie_big_nohaplotig	exon	8176735	8176914	100	+	.	Parent=FBgn0010228.1.mrna1;Target=FBgn0010228.1 175 354 +
Chr2	stalkie_big_nohaplotig	CDS	8175724	8175897	.	+	0	Parent=FBgn0010228.1.mrna1;Target=FBgn0010228.1 1 174 +
Chr2	stalkie_big_nohaplotig	CDS	8176735	8176914	.	+	0	Parent=FBgn0010228.1.mrna1;Target=FBgn0010228.1 175 354 +
Chr2	gffcl	locus	8179782	8182697	.	-	.	ID=RLOC_00014557;geneIDs=comp58867_c0_seq1.path1;transcripts=comp58867_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8179782	8182697	.	-	.	ID=comp58867_c0_seq1.mrna1;geneID=comp58867_c0_seq1.path1;Name=comp58867_c0_seq1;Dir=antisensecoverage=100.0;identity=99.2;matches=1294;mismatches=8;indels=2;unknowns=0;locus=RLOC_00014557
Chr2	stalkie_big_nohaplotig	exon	8179782	8180754	99	-	.	Parent=comp58867_c0_seq1.mrna1;Target=comp58867_c0_seq1 1 973 -
Chr2	stalkie_big_nohaplotig	exon	8180821	8181010	99	-	.	Parent=comp58867_c0_seq1.mrna1;Target=comp58867_c0_seq1 974 1163 -
Chr2	stalkie_big_nohaplotig	exon	8182558	8182697	99	-	.	Parent=comp58867_c0_seq1.mrna1;Target=comp58867_c0_seq1 1164 1303 -
Chr2	stalkie_big_nohaplotig	CDS	8180569	8180754	.	-	0	Parent=comp58867_c0_seq1.mrna1;Target=comp58867_c0_seq1 788 973 .
Chr2	stalkie_big_nohaplotig	CDS	8180821	8180970	.	-	0	Parent=comp58867_c0_seq1.mrna1;Target=comp58867_c0_seq1 974 1123 .
Chr2	gffcl	locus	8184934	8186006	.	+	.	ID=RLOC_00014558;geneIDs=FBgn0050404.1.path1;transcripts=FBgn0050404.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8184934	8186006	.	+	.	ID=FBgn0050404.1.mrna1;geneID=FBgn0050404.1.path1;Name=FBgn0050404.1;Dir=sensecoverage=100.0;identity=100.0;matches=918;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014558
Chr2	stalkie_big_nohaplotig	exon	8184934	8185584	100	+	.	Parent=FBgn0050404.1.mrna1;Target=FBgn0050404.1 1 651 +
Chr2	stalkie_big_nohaplotig	exon	8185740	8186006	100	+	.	Parent=FBgn0050404.1.mrna1;Target=FBgn0050404.1 652 918 +
Chr2	stalkie_big_nohaplotig	CDS	8184934	8185584	.	+	0	Parent=FBgn0050404.1.mrna1;Target=FBgn0050404.1 1 651 +
Chr2	stalkie_big_nohaplotig	CDS	8185740	8186006	.	+	0	Parent=FBgn0050404.1.mrna1;Target=FBgn0050404.1 652 918 +
Chr2	gffcl	locus	8188453	8190757	.	+	.	ID=RLOC_00014559;geneIDs=FBgn0034657.1.path1;transcripts=FBgn0034657.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8188453	8190757	.	+	.	ID=FBgn0034657.1.mrna1;geneID=FBgn0034657.1.path1;Name=FBgn0034657.1;Dir=sensecoverage=100.0;identity=99.9;matches=2038;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014559
Chr2	stalkie_big_nohaplotig	exon	8188453	8188483	100	+	.	Parent=FBgn0034657.1.mrna1;Target=FBgn0034657.1 1 31 +
Chr2	stalkie_big_nohaplotig	exon	8188641	8188909	99	+	.	Parent=FBgn0034657.1.mrna1;Target=FBgn0034657.1 32 300 +
Chr2	stalkie_big_nohaplotig	exon	8189018	8190757	99	+	.	Parent=FBgn0034657.1.mrna1;Target=FBgn0034657.1 301 2040 +
Chr2	stalkie_big_nohaplotig	CDS	8188453	8188483	.	+	0	Parent=FBgn0034657.1.mrna1;Target=FBgn0034657.1 1 31 +
Chr2	stalkie_big_nohaplotig	CDS	8188641	8188909	.	+	2	Parent=FBgn0034657.1.mrna1;Target=FBgn0034657.1 32 300 +
Chr2	stalkie_big_nohaplotig	CDS	8189018	8190757	.	+	0	Parent=FBgn0034657.1.mrna1;Target=FBgn0034657.1 301 2040 +
Chr2	gffcl	locus	8191866	8192274	.	+	.	ID=RLOC_00014560;geneIDs=comp147911_c0_seq1.path1;transcripts=comp147911_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8191866	8192274	.	+	.	ID=comp147911_c0_seq1.mrna1;geneID=comp147911_c0_seq1.path1;Name=comp147911_c0_seq1;Dir=indeterminatecoverage=99.0;identity=100.0;matches=409;mismatches=0;indels=0;unknowns=0;Target=comp147911_c0_seq1 413 5 .;CDS_Target=comp147911_c0_seq1 83 6 .;locus=RLOC_00014560
Chr2	stalkie_big_nohaplotig	exon	8191866	8192274	100	+	.	Parent=comp147911_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	8191867	8191944	.	+	0	Parent=comp147911_c0_seq1.mrna1
Chr2	gffcl	locus	8193143	8194646	.	-	.	ID=RLOC_00014561;geneIDs=FBgn0021872.1.path1;transcripts=FBgn0021872.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8193143	8194646	.	-	.	ID=FBgn0021872.1.mrna1;geneID=FBgn0021872.1.path1;Name=FBgn0021872.1;Dir=sensecoverage=100.0;identity=98.3;matches=1420;mismatches=2;indels=23;unknowns=0;locus=RLOC_00014561
Chr2	stalkie_big_nohaplotig	exon	8193143	8194378	97	-	.	Parent=FBgn0021872.1.mrna1;Target=FBgn0021872.1 210 1422 +
Chr2	stalkie_big_nohaplotig	exon	8194438	8194646	100	-	.	Parent=FBgn0021872.1.mrna1;Target=FBgn0021872.1 1 209 +
Chr2	stalkie_big_nohaplotig	CDS	8193143	8194378	.	-	1	Parent=FBgn0021872.1.mrna1;Target=FBgn0021872.1 210 1422 +
Chr2	stalkie_big_nohaplotig	CDS	8194438	8194646	.	-	0	Parent=FBgn0021872.1.mrna1;Target=FBgn0021872.1 1 209 +
Chr2	gffcl	locus	8195764	8197672	.	+	.	ID=RLOC_00014562;geneIDs=FBgn0034481.1.path1;transcripts=FBgn0034481.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8195764	8197672	.	+	.	ID=FBgn0034481.1.mrna1;geneID=FBgn0034481.1.path1;Name=FBgn0034481.1;Dir=sensecoverage=100.0;identity=99.5;matches=600;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014562
Chr2	stalkie_big_nohaplotig	exon	8195764	8195827	96	+	.	Parent=FBgn0034481.1.mrna1;Target=FBgn0034481.1 1 64 +
Chr2	stalkie_big_nohaplotig	exon	8195914	8196077	99	+	.	Parent=FBgn0034481.1.mrna1;Target=FBgn0034481.1 65 228 +
Chr2	stalkie_big_nohaplotig	exon	8196176	8196249	100	+	.	Parent=FBgn0034481.1.mrna1;Target=FBgn0034481.1 229 302 +
Chr2	stalkie_big_nohaplotig	exon	8196309	8196519	100	+	.	Parent=FBgn0034481.1.mrna1;Target=FBgn0034481.1 303 513 +
Chr2	stalkie_big_nohaplotig	exon	8197583	8197672	100	+	.	Parent=FBgn0034481.1.mrna1;Target=FBgn0034481.1 514 603 +
Chr2	stalkie_big_nohaplotig	CDS	8195764	8195827	.	+	0	Parent=FBgn0034481.1.mrna1;Target=FBgn0034481.1 1 64 +
Chr2	stalkie_big_nohaplotig	CDS	8195914	8196077	.	+	2	Parent=FBgn0034481.1.mrna1;Target=FBgn0034481.1 65 228 +
Chr2	stalkie_big_nohaplotig	CDS	8196176	8196249	.	+	0	Parent=FBgn0034481.1.mrna1;Target=FBgn0034481.1 229 302 +
Chr2	stalkie_big_nohaplotig	CDS	8196309	8196519	.	+	1	Parent=FBgn0034481.1.mrna1;Target=FBgn0034481.1 303 513 +
Chr2	stalkie_big_nohaplotig	CDS	8197583	8197672	.	+	0	Parent=FBgn0034481.1.mrna1;Target=FBgn0034481.1 514 603 +
Chr2	gffcl	locus	8198597	8207721	.	+	.	ID=RLOC_00014563;geneIDs=comp86990_c0_seq1.path1;transcripts=comp86990_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8198597	8207721	.	+	.	ID=comp86990_c0_seq1.mrna1;geneID=comp86990_c0_seq1.path1;Name=comp86990_c0_seq1;Dir=antisensecoverage=98.0;identity=99.4;matches=491;mismatches=1;indels=2;unknowns=0;Target=comp86990_c0_seq1 447 503 .;locus=RLOC_00014563
Chr2	stalkie_big_nohaplotig	exon	8198597	8199070	99	+	.	Parent=comp86990_c0_seq1.mrna1;Target=comp86990_c0_seq1 29 504 -
Chr2	stalkie_big_nohaplotig	exon	8207704	8207721	100	+	.	Parent=comp86990_c0_seq1.mrna1;Target=comp86990_c0_seq1 11 28 -
Chr2	stalkie_big_nohaplotig	CDS	8198598	8198654	.	+	0	Parent=comp86990_c0_seq1.mrna1
Chr2	gffcl	locus	8234816	8235416	.	-	.	ID=RLOC_00014565;geneIDs=FBgn0002736.1.path1;transcripts=FBgn0002736.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8234816	8235416	.	-	.	ID=FBgn0002736.1.mrna1;geneID=FBgn0002736.1.path1;Name=FBgn0002736.1;Dir=sensecoverage=100.0;identity=100.0;matches=486;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014565
Chr2	stalkie_big_nohaplotig	exon	8234816	8234995	100	-	.	Parent=FBgn0002736.1.mrna1;Target=FBgn0002736.1 307 486 +
Chr2	stalkie_big_nohaplotig	exon	8235062	8235343	100	-	.	Parent=FBgn0002736.1.mrna1;Target=FBgn0002736.1 25 306 +
Chr2	stalkie_big_nohaplotig	exon	8235393	8235416	100	-	.	Parent=FBgn0002736.1.mrna1;Target=FBgn0002736.1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	8234816	8234995	.	-	0	Parent=FBgn0002736.1.mrna1;Target=FBgn0002736.1 307 486 +
Chr2	stalkie_big_nohaplotig	CDS	8235062	8235343	.	-	0	Parent=FBgn0002736.1.mrna1;Target=FBgn0002736.1 25 306 +
Chr2	stalkie_big_nohaplotig	CDS	8235393	8235416	.	-	0	Parent=FBgn0002736.1.mrna1;Target=FBgn0002736.1 1 24 +
Chr2	gffcl	locus	8240118	8243037	.	+	.	ID=RLOC_00014566;geneIDs=FBgn0020312.1.path1;transcripts=FBgn0020312.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8240118	8243037	.	+	.	ID=FBgn0020312.1.mrna1;geneID=FBgn0020312.1.path1;Name=FBgn0020312.1;Dir=sensecoverage=100.0;identity=99.4;matches=2837;mismatches=16;indels=0;unknowns=0;locus=RLOC_00014566
Chr2	stalkie_big_nohaplotig	exon	8240118	8241321	99	+	.	Parent=FBgn0020312.1.mrna1;Target=FBgn0020312.1 1 1204 +
Chr2	stalkie_big_nohaplotig	exon	8241389	8243037	99	+	.	Parent=FBgn0020312.1.mrna1;Target=FBgn0020312.1 1205 2853 +
Chr2	stalkie_big_nohaplotig	CDS	8240118	8241321	.	+	0	Parent=FBgn0020312.1.mrna1;Target=FBgn0020312.1 1 1204 +
Chr2	stalkie_big_nohaplotig	CDS	8241389	8243037	.	+	2	Parent=FBgn0020312.1.mrna1;Target=FBgn0020312.1 1205 2853 +
Chr2	gffcl	locus	8251841	8253916	.	+	.	ID=RLOC_00014568;geneIDs=FBgn0034588.1.path1;transcripts=FBgn0034588.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8251841	8253916	.	+	.	ID=FBgn0034588.1.mrna1;geneID=FBgn0034588.1.path1;Name=FBgn0034588.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=2065;mismatches=11;indels=0;unknowns=0;Target=FBgn0034588.1 2076 1 .;locus=RLOC_00014568
Chr2	stalkie_big_nohaplotig	exon	8251841	8253916	99	+	.	Parent=FBgn0034588.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	8251841	8253916	.	+	0	Parent=FBgn0034588.1.mrna1
Chr2	gffcl	locus	8254774	8358306	.	+	.	ID=RLOC_00014569;geneIDs=comp113722_c0_seq1.path1;transcripts=comp113722_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8254774	8358306	.	+	.	ID=comp113722_c0_seq1.mrna1;geneID=comp113722_c0_seq1.path1;Name=comp113722_c0_seq1;Dir=indeterminatecoverage=56.7;identity=95.1;matches=351;mismatches=15;indels=3;unknowns=0;locus=RLOC_00014569
Chr2	stalkie_big_nohaplotig	exon	8254774	8254781	100	+	.	Parent=comp113722_c0_seq1.mrna1;Target=comp113722_c0_seq1 288 281 .
Chr2	stalkie_big_nohaplotig	exon	8276164	8276167	100	+	.	Parent=comp113722_c0_seq1.mrna1;Target=comp113722_c0_seq1 292 289 .
Chr2	stalkie_big_nohaplotig	exon	8290191	8290196	100	+	.	Parent=comp113722_c0_seq1.mrna1;Target=comp113722_c0_seq1 298 293 .
Chr2	stalkie_big_nohaplotig	exon	8296048	8296049	100	+	.	Parent=comp113722_c0_seq1.mrna1;Target=comp113722_c0_seq1 301 300 .
Chr2	stalkie_big_nohaplotig	exon	8296478	8296481	100	+	.	Parent=comp113722_c0_seq1.mrna1;Target=comp113722_c0_seq1 305 302 .
Chr2	stalkie_big_nohaplotig	exon	8312288	8312299	83	+	.	Parent=comp113722_c0_seq1.mrna1;Target=comp113722_c0_seq1 315 306 .
Chr2	stalkie_big_nohaplotig	exon	8321474	8321479	66	+	.	Parent=comp113722_c0_seq1.mrna1;Target=comp113722_c0_seq1 321 316 .
Chr2	stalkie_big_nohaplotig	exon	8356619	8356623	80	+	.	Parent=comp113722_c0_seq1.mrna1;Target=comp113722_c0_seq1 326 322 .
Chr2	stalkie_big_nohaplotig	exon	8357985	8358306	95	+	.	Parent=comp113722_c0_seq1.mrna1;Target=comp113722_c0_seq1 647 327 .
Chr2	stalkie_big_nohaplotig	CDS	8254775	8254781	.	+	0	Parent=comp113722_c0_seq1.mrna1;Target=comp113722_c0_seq1 288 282 .
Chr2	stalkie_big_nohaplotig	CDS	8276164	8276167	.	+	2	Parent=comp113722_c0_seq1.mrna1;Target=comp113722_c0_seq1 292 289 .
Chr2	stalkie_big_nohaplotig	CDS	8290191	8290196	.	+	1	Parent=comp113722_c0_seq1.mrna1;Target=comp113722_c0_seq1 298 293 .
Chr2	stalkie_big_nohaplotig	CDS	8296048	8296049	.	+	1	Parent=comp113722_c0_seq1.mrna1;Target=comp113722_c0_seq1 301 300 .
Chr2	stalkie_big_nohaplotig	CDS	8296478	8296481	.	+	2	Parent=comp113722_c0_seq1.mrna1;Target=comp113722_c0_seq1 305 302 .
Chr2	gffcl	locus	8277821	8281397	.	+	.	ID=RLOC_00014570;geneIDs=ORF56.path1;transcripts=ORF56.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8277821	8281397	.	+	.	ID=ORF56.mrna1;geneID=ORF56.path1;Name=ORF56;Dir=sensecoverage=100.0;identity=98.4;matches=3287;mismatches=43;indels=9;unknowns=0;locus=RLOC_00014570
Chr2	stalkie_big_nohaplotig	exon	8277821	8277925	99	+	.	Parent=ORF56.mrna1;Target=ORF56 1 105 +
Chr2	stalkie_big_nohaplotig	exon	8278094	8278226	96	+	.	Parent=ORF56.mrna1;Target=ORF56 106 238 +
Chr2	stalkie_big_nohaplotig	exon	8278306	8281397	98	+	.	Parent=ORF56.mrna1;Target=ORF56 239 3339 +
Chr2	stalkie_big_nohaplotig	CDS	8277821	8277925	.	+	0	Parent=ORF56.mrna1;Target=ORF56 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	8278094	8278226	.	+	0	Parent=ORF56.mrna1;Target=ORF56 106 238 +
Chr2	stalkie_big_nohaplotig	CDS	8278306	8281397	.	+	2	Parent=ORF56.mrna1;Target=ORF56 239 3339 +
Chr2	gffcl	locus	8304555	8305747	.	-	.	ID=RLOC_00014571;geneIDs=comp152758_c0_seq1.path1;transcripts=comp152758_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8304555	8305747	.	-	.	ID=comp152758_c0_seq1.mrna1;geneID=comp152758_c0_seq1.path1;Name=comp152758_c0_seq1;Dir=sensecoverage=100.0;identity=98.5;matches=1032;mismatches=14;indels=2;unknowns=0;locus=RLOC_00014571
Chr2	stalkie_big_nohaplotig	exon	8304555	8305329	98	-	.	Parent=comp152758_c0_seq1.mrna1;Target=comp152758_c0_seq1 272 1048 +
Chr2	stalkie_big_nohaplotig	exon	8305405	8305520	97	-	.	Parent=comp152758_c0_seq1.mrna1;Target=comp152758_c0_seq1 156 271 +
Chr2	stalkie_big_nohaplotig	exon	8305593	8305747	99	-	.	Parent=comp152758_c0_seq1.mrna1;Target=comp152758_c0_seq1 1 155 +
Chr2	stalkie_big_nohaplotig	CDS	8304755	8305329	.	-	2	Parent=comp152758_c0_seq1.mrna1;Target=comp152758_c0_seq1 272 846 +
Chr2	stalkie_big_nohaplotig	CDS	8305405	8305516	.	-	0	Parent=comp152758_c0_seq1.mrna1;Target=comp152758_c0_seq1 160 271 +
Chr2	gffcl	locus	8307473	8310880	.	-	.	ID=RLOC_00014572;geneIDs=FBgn0085425.1.path1;transcripts=FBgn0085425.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8307473	8310880	.	-	.	ID=FBgn0085425.1.mrna1;geneID=FBgn0085425.1.path1;Name=FBgn0085425.1;Dir=sensecoverage=100.0;identity=99.2;matches=2892;mismatches=23;indels=1;unknowns=0;locus=RLOC_00014572
Chr2	stalkie_big_nohaplotig	exon	8307473	8308470	99	-	.	Parent=FBgn0085425.1.mrna1;Target=FBgn0085425.1 1919 2916 +
Chr2	stalkie_big_nohaplotig	exon	8308909	8309066	99	-	.	Parent=FBgn0085425.1.mrna1;Target=FBgn0085425.1 1761 1918 +
Chr2	stalkie_big_nohaplotig	exon	8309122	8310880	98	-	.	Parent=FBgn0085425.1.mrna1;Target=FBgn0085425.1 1 1760 +
Chr2	stalkie_big_nohaplotig	CDS	8307473	8308470	.	-	2	Parent=FBgn0085425.1.mrna1;Target=FBgn0085425.1 1919 2916 +
Chr2	stalkie_big_nohaplotig	CDS	8308909	8309066	.	-	1	Parent=FBgn0085425.1.mrna1;Target=FBgn0085425.1 1761 1918 +
Chr2	stalkie_big_nohaplotig	CDS	8309122	8310824	.	-	0	Parent=FBgn0085425.1.mrna1;Target=FBgn0085425.1 58 1760 +
Chr2	gffcl	locus	8338391	8392551	.	-	.	ID=RLOC_00014573;geneIDs=FBgn0050015.1.path1,comp119002_c0_seq1.path1,comp156635_c0_seq1.path1,comp162596_c1_seq1.path1;transcripts=FBgn0050015.1.mrna1,comp119002_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8341634	8392551	.	-	.	ID=FBgn0050015.1.mrna1;geneID=FBgn0050015.1.path1;Name=FBgn0050015.1;Dir=sensecoverage=97.1;identity=99.6;matches=4458;mismatches=18;indels=0;unknowns=0;locus=RLOC_00014573
Chr2	stalkie_big_nohaplotig	exon	8341634	8344526	99	-	.	Parent=FBgn0050015.1.mrna1;Target=FBgn0050015.1 1703 4595 +
Chr2	stalkie_big_nohaplotig	exon	8344585	8344651	100	-	.	Parent=FBgn0050015.1.mrna1;Target=FBgn0050015.1 1636 1702 +
Chr2	stalkie_big_nohaplotig	exon	8344718	8345176	100	-	.	Parent=FBgn0050015.1.mrna1;Target=FBgn0050015.1 1177 1635 +
Chr2	stalkie_big_nohaplotig	exon	8359976	8360066	100	-	.	Parent=FBgn0050015.1.mrna1;Target=FBgn0050015.1 1086 1176 +
Chr2	stalkie_big_nohaplotig	exon	8360496	8361246	99	-	.	Parent=FBgn0050015.1.mrna1;Target=FBgn0050015.1 335 1085 +
Chr2	stalkie_big_nohaplotig	exon	8386315	8386522	100	-	.	Parent=FBgn0050015.1.mrna1;Target=FBgn0050015.1 127 334 +
Chr2	stalkie_big_nohaplotig	exon	8392545	8392551	100	-	.	Parent=FBgn0050015.1.mrna1;Target=FBgn0050015.1 120 126 +
Chr2	stalkie_big_nohaplotig	CDS	8341636	8344526	.	-	2	Parent=FBgn0050015.1.mrna1;Target=FBgn0050015.1 1703 4593 +
Chr2	stalkie_big_nohaplotig	CDS	8344585	8344651	.	-	0	Parent=FBgn0050015.1.mrna1;Target=FBgn0050015.1 1636 1702 +
Chr2	stalkie_big_nohaplotig	CDS	8344718	8345176	.	-	0	Parent=FBgn0050015.1.mrna1;Target=FBgn0050015.1 1177 1635 +
Chr2	stalkie_big_nohaplotig	CDS	8359976	8360066	.	-	1	Parent=FBgn0050015.1.mrna1;Target=FBgn0050015.1 1086 1176 +
Chr2	stalkie_big_nohaplotig	CDS	8360496	8361246	.	-	2	Parent=FBgn0050015.1.mrna1;Target=FBgn0050015.1 335 1085 +
Chr2	stalkie_big_nohaplotig	CDS	8386315	8386522	.	-	0	Parent=FBgn0050015.1.mrna1;Target=FBgn0050015.1 127 334 +
Chr2	stalkie_big_nohaplotig	CDS	8392545	8392550	.	-	0	Parent=FBgn0050015.1.mrna1;Target=FBgn0050015.1 121 126 +
Chr2	stalkie_big_nohaplotig	mRNA	8356635	8359999	.	-	.	ID=comp119002_c0_seq1.mrna1;geneID=comp119002_c0_seq1.path1;Name=comp119002_c0_seq1;Dir=antisensecoverage=100.0;identity=97.9;matches=999;mismatches=20;indels=1;unknowns=0;Target=comp119002_c0_seq1 249 389 .;locus=RLOC_00014573
Chr2	stalkie_big_nohaplotig	exon	8356635	8357630	97	-	.	Parent=comp119002_c0_seq1.mrna1;Target=comp119002_c0_seq1 1 995 -
Chr2	stalkie_big_nohaplotig	exon	8359976	8359999	100	-	.	Parent=comp119002_c0_seq1.mrna1;Target=comp119002_c0_seq1 996 1019 -
Chr2	stalkie_big_nohaplotig	CDS	8356883	8357023	.	-	0	Parent=comp119002_c0_seq1.mrna1
Chr2	gffcl	locus	8376358	8376650	.	-	.	ID=RLOC_00014574;geneIDs=comp113398_c0_seq1.path1;transcripts=comp113398_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8376358	8376650	.	-	.	ID=comp113398_c0_seq1.mrna1;geneID=comp113398_c0_seq1.path1;Name=comp113398_c0_seq1;Dir=indeterminatecoverage=93.0;identity=99.0;matches=290;mismatches=1;indels=2;unknowns=0;Target=comp113398_c0_seq1 291 1 .;CDS_Target=comp113398_c0_seq1 71 3 .;locus=RLOC_00014574
Chr2	stalkie_big_nohaplotig	exon	8376358	8376650	98	-	.	Parent=comp113398_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	8376580	8376648	.	-	0	Parent=comp113398_c0_seq1.mrna1
Chr2	gffcl	locus	8376944	8377269	.	+	.	ID=RLOC_00014575;geneIDs=comp145862_c0_seq1.path1;transcripts=comp145862_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8376944	8377269	.	+	.	ID=comp145862_c0_seq1.mrna1;geneID=comp145862_c0_seq1.path1;Name=comp145862_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=326;mismatches=0;indels=0;unknowns=0;Target=comp145862_c0_seq1 326 1 .;CDS_Target=comp145862_c0_seq1 326 201 .;locus=RLOC_00014575
Chr2	stalkie_big_nohaplotig	exon	8376944	8377269	100	+	.	Parent=comp145862_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	8377144	8377269	.	+	0	Parent=comp145862_c0_seq1.mrna1
Chr2	gffcl	locus	8389904	8390398	.	+	.	ID=RLOC_00014576;geneIDs=comp146775_c0_seq1.path2;transcripts=comp146775_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	8389904	8390398	.	+	.	ID=comp146775_c0_seq1.mrna2;geneID=comp146775_c0_seq1.path2;Name=comp146775_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.4;matches=482;mismatches=13;indels=0;unknowns=0;Target=comp146775_c0_seq1 495 1 .;CDS_Target=comp146775_c0_seq1 323 243 .;locus=RLOC_00014576
Chr2	stalkie_big_nohaplotig	exon	8389904	8390398	97	+	.	Parent=comp146775_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	8390146	8390226	.	+	0	Parent=comp146775_c0_seq1.mrna2
Chr2	gffcl	locus	8427920	8430405	.	-	.	ID=RLOC_00014577;geneIDs=comp73689_c0_seq1.path1;transcripts=comp73689_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8427920	8430405	.	-	.	ID=comp73689_c0_seq1.mrna1;geneID=comp73689_c0_seq1.path1;Name=comp73689_c0_seq1;Dir=antisensecoverage=97.1;identity=96.4;matches=1071;mismatches=25;indels=15;unknowns=0;locus=RLOC_00014577
Chr2	stalkie_big_nohaplotig	exon	8427920	8428802	99	-	.	Parent=comp73689_c0_seq1.mrna1;Target=comp73689_c0_seq1 1 882 -
Chr2	stalkie_big_nohaplotig	exon	8428868	8428991	86	-	.	Parent=comp73689_c0_seq1.mrna1;Target=comp73689_c0_seq1 883 1020 -
Chr2	stalkie_big_nohaplotig	exon	8430316	8430405	85	-	.	Parent=comp73689_c0_seq1.mrna1;Target=comp73689_c0_seq1 1021 1110 -
Chr2	stalkie_big_nohaplotig	CDS	8428674	8428802	.	-	0	Parent=comp73689_c0_seq1.mrna1;Target=comp73689_c0_seq1 754 882 .
Chr2	stalkie_big_nohaplotig	CDS	8428868	8428885	.	-	0	Parent=comp73689_c0_seq1.mrna1;Target=comp73689_c0_seq1 883 900 .
Chr2	gffcl	locus	8443746	8444035	.	+	.	ID=RLOC_00014578;geneIDs=comp152013_c0_seq1.path1;transcripts=comp152013_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8443746	8444035	.	+	.	ID=comp152013_c0_seq1.mrna1;geneID=comp152013_c0_seq1.path1;Name=comp152013_c0_seq1;Dir=indeterminatecoverage=29.0;identity=98.6;matches=286;mismatches=4;indels=0;unknowns=0;Target=comp152013_c0_seq1 290 1 .;CDS_Target=comp152013_c0_seq1 92 3 .;locus=RLOC_00014578
Chr2	stalkie_big_nohaplotig	exon	8443746	8444035	98	+	.	Parent=comp152013_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	8443748	8443837	.	+	0	Parent=comp152013_c0_seq1.mrna1
Chr2	gffcl	locus	8462393	8472507	.	+	.	ID=RLOC_00014579;geneIDs=FBgn0034184.1.path1;transcripts=FBgn0034184.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8462393	8472507	.	+	.	ID=FBgn0034184.1.mrna1;geneID=FBgn0034184.1.path1;Name=FBgn0034184.1;Dir=sensecoverage=100.0;identity=99.9;matches=2776;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014579
Chr2	stalkie_big_nohaplotig	exon	8462393	8462552	100	+	.	Parent=FBgn0034184.1.mrna1;Target=FBgn0034184.1 1 160 +
Chr2	stalkie_big_nohaplotig	exon	8464713	8464879	100	+	.	Parent=FBgn0034184.1.mrna1;Target=FBgn0034184.1 161 327 +
Chr2	stalkie_big_nohaplotig	exon	8464953	8465234	99	+	.	Parent=FBgn0034184.1.mrna1;Target=FBgn0034184.1 328 609 +
Chr2	stalkie_big_nohaplotig	exon	8465289	8465429	100	+	.	Parent=FBgn0034184.1.mrna1;Target=FBgn0034184.1 610 750 +
Chr2	stalkie_big_nohaplotig	exon	8465503	8465684	99	+	.	Parent=FBgn0034184.1.mrna1;Target=FBgn0034184.1 751 932 +
Chr2	stalkie_big_nohaplotig	exon	8465745	8465986	100	+	.	Parent=FBgn0034184.1.mrna1;Target=FBgn0034184.1 933 1174 +
Chr2	stalkie_big_nohaplotig	exon	8469387	8470802	100	+	.	Parent=FBgn0034184.1.mrna1;Target=FBgn0034184.1 1175 2590 +
Chr2	stalkie_big_nohaplotig	exon	8470911	8471060	100	+	.	Parent=FBgn0034184.1.mrna1;Target=FBgn0034184.1 2591 2740 +
Chr2	stalkie_big_nohaplotig	exon	8472470	8472507	100	+	.	Parent=FBgn0034184.1.mrna1;Target=FBgn0034184.1 2741 2778 +
Chr2	stalkie_big_nohaplotig	CDS	8462393	8462552	.	+	0	Parent=FBgn0034184.1.mrna1;Target=FBgn0034184.1 1 160 +
Chr2	stalkie_big_nohaplotig	CDS	8464713	8464879	.	+	2	Parent=FBgn0034184.1.mrna1;Target=FBgn0034184.1 161 327 +
Chr2	stalkie_big_nohaplotig	CDS	8464953	8465234	.	+	0	Parent=FBgn0034184.1.mrna1;Target=FBgn0034184.1 328 609 +
Chr2	stalkie_big_nohaplotig	CDS	8465289	8465429	.	+	0	Parent=FBgn0034184.1.mrna1;Target=FBgn0034184.1 610 750 +
Chr2	stalkie_big_nohaplotig	CDS	8465503	8465684	.	+	0	Parent=FBgn0034184.1.mrna1;Target=FBgn0034184.1 751 932 +
Chr2	stalkie_big_nohaplotig	CDS	8465745	8465986	.	+	1	Parent=FBgn0034184.1.mrna1;Target=FBgn0034184.1 933 1174 +
Chr2	stalkie_big_nohaplotig	CDS	8469387	8470802	.	+	2	Parent=FBgn0034184.1.mrna1;Target=FBgn0034184.1 1175 2590 +
Chr2	stalkie_big_nohaplotig	CDS	8470911	8471060	.	+	2	Parent=FBgn0034184.1.mrna1;Target=FBgn0034184.1 2591 2740 +
Chr2	stalkie_big_nohaplotig	CDS	8472470	8472507	.	+	2	Parent=FBgn0034184.1.mrna1;Target=FBgn0034184.1 2741 2778 +
Chr2	gffcl	locus	8473095	8473247	.	.	.	ID=RLOC_00014580;geneIDs=comp107266_c0_seq1.path1,comp107266_c0_seq1.path2;transcripts=comp107266_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8473095	8473247	.	-	.	ID=comp107266_c0_seq1.mrna1;geneID=comp107266_c0_seq1.path1;Name=comp107266_c0_seq1;Dir=indeterminatecoverage=57.9;identity=94.4;matches=152;mismatches=1;indels=8;unknowns=0;Target=comp107266_c0_seq1 162 2 .;CDS_Target=comp107266_c0_seq1 56 3 .;locus=RLOC_00014580
Chr2	stalkie_big_nohaplotig	exon	8473095	8473247	94	-	.	Parent=comp107266_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	8473193	8473246	.	-	0	Parent=comp107266_c0_seq1.mrna1
Chr2	gffcl	locus	8476704	8482433	.	+	.	ID=RLOC_00014581;geneIDs=FBgn0026721.1.path1;transcripts=FBgn0026721.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8476704	8482433	.	+	.	ID=FBgn0026721.1.mrna1;geneID=FBgn0026721.1.path1;Name=FBgn0026721.1;Dir=sensecoverage=100.0;identity=99.9;matches=2328;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014581
Chr2	stalkie_big_nohaplotig	exon	8476704	8476914	99	+	.	Parent=FBgn0026721.1.mrna1;Target=FBgn0026721.1 1 211 +
Chr2	stalkie_big_nohaplotig	exon	8479845	8480239	100	+	.	Parent=FBgn0026721.1.mrna1;Target=FBgn0026721.1 212 606 +
Chr2	stalkie_big_nohaplotig	exon	8480302	8480632	100	+	.	Parent=FBgn0026721.1.mrna1;Target=FBgn0026721.1 607 937 +
Chr2	stalkie_big_nohaplotig	exon	8480694	8480824	100	+	.	Parent=FBgn0026721.1.mrna1;Target=FBgn0026721.1 938 1068 +
Chr2	stalkie_big_nohaplotig	exon	8480887	8481112	99	+	.	Parent=FBgn0026721.1.mrna1;Target=FBgn0026721.1 1069 1294 +
Chr2	stalkie_big_nohaplotig	exon	8481195	8481372	99	+	.	Parent=FBgn0026721.1.mrna1;Target=FBgn0026721.1 1295 1472 +
Chr2	stalkie_big_nohaplotig	exon	8481452	8481915	100	+	.	Parent=FBgn0026721.1.mrna1;Target=FBgn0026721.1 1473 1936 +
Chr2	stalkie_big_nohaplotig	exon	8481976	8482143	100	+	.	Parent=FBgn0026721.1.mrna1;Target=FBgn0026721.1 1937 2104 +
Chr2	stalkie_big_nohaplotig	exon	8482207	8482433	100	+	.	Parent=FBgn0026721.1.mrna1;Target=FBgn0026721.1 2105 2331 +
Chr2	stalkie_big_nohaplotig	CDS	8476704	8476914	.	+	0	Parent=FBgn0026721.1.mrna1;Target=FBgn0026721.1 1 211 +
Chr2	stalkie_big_nohaplotig	CDS	8479845	8480239	.	+	2	Parent=FBgn0026721.1.mrna1;Target=FBgn0026721.1 212 606 +
Chr2	stalkie_big_nohaplotig	CDS	8480302	8480632	.	+	0	Parent=FBgn0026721.1.mrna1;Target=FBgn0026721.1 607 937 +
Chr2	stalkie_big_nohaplotig	CDS	8480694	8480824	.	+	2	Parent=FBgn0026721.1.mrna1;Target=FBgn0026721.1 938 1068 +
Chr2	stalkie_big_nohaplotig	CDS	8480887	8481112	.	+	0	Parent=FBgn0026721.1.mrna1;Target=FBgn0026721.1 1069 1294 +
Chr2	stalkie_big_nohaplotig	CDS	8481195	8481372	.	+	2	Parent=FBgn0026721.1.mrna1;Target=FBgn0026721.1 1295 1472 +
Chr2	stalkie_big_nohaplotig	CDS	8481452	8481915	.	+	1	Parent=FBgn0026721.1.mrna1;Target=FBgn0026721.1 1473 1936 +
Chr2	stalkie_big_nohaplotig	CDS	8481976	8482143	.	+	2	Parent=FBgn0026721.1.mrna1;Target=FBgn0026721.1 1937 2104 +
Chr2	stalkie_big_nohaplotig	CDS	8482207	8482433	.	+	2	Parent=FBgn0026721.1.mrna1;Target=FBgn0026721.1 2105 2331 +
Chr2	gffcl	locus	8483600	8484457	.	+	.	ID=RLOC_00014582;geneIDs=FBgn0033450.1.path1;transcripts=FBgn0033450.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8483600	8484457	.	+	.	ID=FBgn0033450.1.mrna1;geneID=FBgn0033450.1.path1;Name=FBgn0033450.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=858;mismatches=0;indels=0;unknowns=0;Target=FBgn0033450.1 858 1 .;locus=RLOC_00014582
Chr2	stalkie_big_nohaplotig	exon	8483600	8484457	100	+	.	Parent=FBgn0033450.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	8483600	8484457	.	+	0	Parent=FBgn0033450.1.mrna1
Chr2	gffcl	locus	8606579	8611379	.	-	.	ID=RLOC_00014584;geneIDs=FBgn0034642.1.path1;transcripts=FBgn0034642.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8606579	8611379	.	-	.	ID=FBgn0034642.1.mrna1;geneID=FBgn0034642.1.path1;Name=FBgn0034642.1;Dir=sensecoverage=100.0;identity=99.6;matches=834;mismatches=2;indels=1;unknowns=0;locus=RLOC_00014584
Chr2	stalkie_big_nohaplotig	exon	8606579	8606802	98	-	.	Parent=FBgn0034642.1.mrna1;Target=FBgn0034642.1 613 837 +
Chr2	stalkie_big_nohaplotig	exon	8606864	8607001	100	-	.	Parent=FBgn0034642.1.mrna1;Target=FBgn0034642.1 475 612 +
Chr2	stalkie_big_nohaplotig	exon	8608151	8608351	100	-	.	Parent=FBgn0034642.1.mrna1;Target=FBgn0034642.1 274 474 +
Chr2	stalkie_big_nohaplotig	exon	8611107	8611379	100	-	.	Parent=FBgn0034642.1.mrna1;Target=FBgn0034642.1 1 273 +
Chr2	stalkie_big_nohaplotig	CDS	8606579	8606802	.	-	0	Parent=FBgn0034642.1.mrna1;Target=FBgn0034642.1 613 837 +
Chr2	stalkie_big_nohaplotig	CDS	8606864	8607001	.	-	0	Parent=FBgn0034642.1.mrna1;Target=FBgn0034642.1 475 612 +
Chr2	stalkie_big_nohaplotig	CDS	8608151	8608351	.	-	0	Parent=FBgn0034642.1.mrna1;Target=FBgn0034642.1 274 474 +
Chr2	stalkie_big_nohaplotig	CDS	8611107	8611379	.	-	0	Parent=FBgn0034642.1.mrna1;Target=FBgn0034642.1 1 273 +
Chr2	stalkie_big_nohaplotig	mRNA	8616155	8616410	.	-	.	ID=FBgn0033317.1.mrna2;geneID=FBgn0033317.1.path2;Name=FBgn0033317.1;Dir=sensecoverage=13.7;identity=100.0;matches=193;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014585
Chr2	stalkie_big_nohaplotig	exon	8616155	8616258	100	-	.	Parent=FBgn0033317.1.mrna2;Target=FBgn0033317.1 1304 1407 +
Chr2	stalkie_big_nohaplotig	exon	8616322	8616410	100	-	.	Parent=FBgn0033317.1.mrna2;Target=FBgn0033317.1 1215 1303 +
Chr2	stalkie_big_nohaplotig	CDS	8616155	8616258	.	-	0	Parent=FBgn0033317.1.mrna2;Target=FBgn0033317.1 1304 1407 +
Chr2	stalkie_big_nohaplotig	CDS	8616322	8616410	.	-	2	Parent=FBgn0033317.1.mrna2;Target=FBgn0033317.1 1215 1303 +
Chr2	gffcl	locus	8623868	8625276	.	+	.	ID=RLOC_00014586;geneIDs=FBgn0034849.1.path1;transcripts=FBgn0034849.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8623868	8625276	.	+	.	ID=FBgn0034849.1.mrna1;geneID=FBgn0034849.1.path1;Name=FBgn0034849.1;Dir=sensecoverage=100.0;identity=99.8;matches=620;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014586
Chr2	stalkie_big_nohaplotig	exon	8623868	8623961	100	+	.	Parent=FBgn0034849.1.mrna1;Target=FBgn0034849.1 1 94 +
Chr2	stalkie_big_nohaplotig	exon	8624013	8624314	99	+	.	Parent=FBgn0034849.1.mrna1;Target=FBgn0034849.1 95 396 +
Chr2	stalkie_big_nohaplotig	exon	8624376	8624487	100	+	.	Parent=FBgn0034849.1.mrna1;Target=FBgn0034849.1 397 508 +
Chr2	stalkie_big_nohaplotig	exon	8625164	8625276	100	+	.	Parent=FBgn0034849.1.mrna1;Target=FBgn0034849.1 509 621 +
Chr2	stalkie_big_nohaplotig	CDS	8623868	8623961	.	+	0	Parent=FBgn0034849.1.mrna1;Target=FBgn0034849.1 1 94 +
Chr2	stalkie_big_nohaplotig	CDS	8624013	8624314	.	+	2	Parent=FBgn0034849.1.mrna1;Target=FBgn0034849.1 95 396 +
Chr2	stalkie_big_nohaplotig	CDS	8624376	8624487	.	+	0	Parent=FBgn0034849.1.mrna1;Target=FBgn0034849.1 397 508 +
Chr2	stalkie_big_nohaplotig	CDS	8625164	8625276	.	+	2	Parent=FBgn0034849.1.mrna1;Target=FBgn0034849.1 509 621 +
Chr2	gffcl	locus	8686947	8687488	.	-	.	ID=RLOC_00014587;geneIDs=comp153270_c0_seq1.path1;transcripts=comp153270_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8686947	8687488	.	-	.	ID=comp153270_c0_seq1.mrna1;geneID=comp153270_c0_seq1.path1;Name=comp153270_c0_seq1;Dir=indeterminatecoverage=97.8;identity=92.6;matches=527;mismatches=12;indels=30;unknowns=0;Target=comp153270_c0_seq1 579 14 .;CDS_Target=comp153270_c0_seq1 126 16 .;locus=RLOC_00014587
Chr2	stalkie_big_nohaplotig	exon	8686947	8687488	92	-	.	Parent=comp153270_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	8687376	8687486	.	-	0	Parent=comp153270_c0_seq1.mrna1
Chr2	gffcl	locus	8688116	8688735	.	-	.	ID=RLOC_00014588;geneIDs=comp157898_c1_seq1.path1;transcripts=comp157898_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8688116	8688735	.	-	.	ID=comp157898_c1_seq1.mrna1;geneID=comp157898_c1_seq1.path1;Name=comp157898_c1_seq1;Dir=indeterminatecoverage=99.8;identity=93.7;matches=582;mismatches=31;indels=8;unknowns=0;Target=comp157898_c1_seq1 615 2 .;CDS_Target=comp157898_c1_seq1 615 475 .;locus=RLOC_00014588
Chr2	stalkie_big_nohaplotig	exon	8688116	8688735	93	-	.	Parent=comp157898_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	8688116	8688256	.	-	0	Parent=comp157898_c1_seq1.mrna1
Chr2	gffcl	locus	8689548	8689997	.	+	.	ID=RLOC_00014589;geneIDs=comp116011_c0_seq1.path1;transcripts=comp116011_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8689548	8689997	.	+	.	ID=comp116011_c0_seq1.mrna1;geneID=comp116011_c0_seq1.path1;Name=comp116011_c0_seq1;Dir=indeterminatecoverage=98.5;identity=98.2;matches=442;mismatches=8;indels=0;unknowns=0;Target=comp116011_c0_seq1 457 8 .;CDS_Target=comp116011_c0_seq1 318 247 .;locus=RLOC_00014589
Chr2	stalkie_big_nohaplotig	exon	8689548	8689997	98	+	.	Parent=comp116011_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	8689787	8689858	.	+	0	Parent=comp116011_c0_seq1.mrna1
Chr2	gffcl	locus	8725636	8726949	.	-	.	ID=RLOC_00014590;geneIDs=comp145108_c2_seq1.path1;transcripts=comp145108_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8725636	8726949	.	-	.	ID=comp145108_c2_seq1.mrna1;geneID=comp145108_c2_seq1.path1;Name=comp145108_c2_seq1;Dir=antisensecoverage=99.9;identity=94.2;matches=966;mismatches=57;indels=3;unknowns=0;locus=RLOC_00014590
Chr2	stalkie_big_nohaplotig	exon	8725636	8725677	100	-	.	Parent=comp145108_c2_seq1.mrna1;Target=comp145108_c2_seq1 1 42 -
Chr2	stalkie_big_nohaplotig	exon	8725954	8726227	92	-	.	Parent=comp145108_c2_seq1.mrna1;Target=comp145108_c2_seq1 43 313 -
Chr2	stalkie_big_nohaplotig	exon	8726240	8726949	94	-	.	Parent=comp145108_c2_seq1.mrna1;Target=comp145108_c2_seq1 314 1023 -
Chr2	stalkie_big_nohaplotig	CDS	8726115	8726227	.	-	2	Parent=comp145108_c2_seq1.mrna1;Target=comp145108_c2_seq1 204 313 .
Chr2	stalkie_big_nohaplotig	CDS	8726240	8726276	.	-	0	Parent=comp145108_c2_seq1.mrna1;Target=comp145108_c2_seq1 314 350 .
Chr2	gffcl	locus	8727157	8727558	.	-	.	ID=RLOC_00014591;geneIDs=comp112333_c0_seq1.path1;transcripts=comp112333_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8727157	8727558	.	-	.	ID=comp112333_c0_seq1.mrna1;geneID=comp112333_c0_seq1.path1;Name=comp112333_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.2;matches=382;mismatches=20;indels=17;unknowns=0;Target=comp112333_c0_seq1 419 1 .;CDS_Target=comp112333_c0_seq1 151 77 .;locus=RLOC_00014591
Chr2	stalkie_big_nohaplotig	exon	8727157	8727558	91	-	.	Parent=comp112333_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	8727408	8727482	.	-	0	Parent=comp112333_c0_seq1.mrna1
Chr2	gffcl	locus	8727754	8728215	.	+	.	ID=RLOC_00014592;geneIDs=FBgn0025638.2.path1;transcripts=FBgn0025638.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8727754	8728215	.	+	.	ID=FBgn0025638.2.mrna1;geneID=FBgn0025638.2.path1;Name=FBgn0025638.2;Dir=sensecoverage=100.0;identity=97.6;matches=328;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014592
Chr2	stalkie_big_nohaplotig	exon	8727754	8727843	98	+	.	Parent=FBgn0025638.2.mrna1;Target=FBgn0025638.2 1 90 +
Chr2	stalkie_big_nohaplotig	exon	8727911	8727938	100	+	.	Parent=FBgn0025638.2.mrna1;Target=FBgn0025638.2 91 118 +
Chr2	stalkie_big_nohaplotig	exon	8727998	8728215	96	+	.	Parent=FBgn0025638.2.mrna1;Target=FBgn0025638.2 119 336 +
Chr2	stalkie_big_nohaplotig	CDS	8727754	8727843	.	+	0	Parent=FBgn0025638.2.mrna1;Target=FBgn0025638.2 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	8727911	8727938	.	+	0	Parent=FBgn0025638.2.mrna1;Target=FBgn0025638.2 91 118 +
Chr2	stalkie_big_nohaplotig	CDS	8727998	8728215	.	+	2	Parent=FBgn0025638.2.mrna1;Target=FBgn0025638.2 119 336 +
Chr2	gffcl	locus	8813915	8816386	.	-	.	ID=RLOC_00014593;geneIDs=comp155605_c1_seq1.path1;transcripts=comp155605_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8813915	8816386	.	-	.	ID=comp155605_c1_seq1.mrna1;geneID=comp155605_c1_seq1.path1;Name=comp155605_c1_seq1;Dir=antisensecoverage=99.9;identity=96.4;matches=810;mismatches=29;indels=1;unknowns=0;locus=RLOC_00014593
Chr2	stalkie_big_nohaplotig	exon	8813915	8814202	94	-	.	Parent=comp155605_c1_seq1.mrna1;Target=comp155605_c1_seq1 1 288 -
Chr2	stalkie_big_nohaplotig	exon	8814253	8814311	100	-	.	Parent=comp155605_c1_seq1.mrna1;Target=comp155605_c1_seq1 289 347 -
Chr2	stalkie_big_nohaplotig	exon	8814418	8814523	99	-	.	Parent=comp155605_c1_seq1.mrna1;Target=comp155605_c1_seq1 348 453 -
Chr2	stalkie_big_nohaplotig	exon	8815298	8815389	98	-	.	Parent=comp155605_c1_seq1.mrna1;Target=comp155605_c1_seq1 454 545 -
Chr2	stalkie_big_nohaplotig	exon	8815450	8815672	96	-	.	Parent=comp155605_c1_seq1.mrna1;Target=comp155605_c1_seq1 546 769 -
Chr2	stalkie_big_nohaplotig	exon	8816316	8816386	94	-	.	Parent=comp155605_c1_seq1.mrna1;Target=comp155605_c1_seq1 770 840 -
Chr2	stalkie_big_nohaplotig	CDS	8815521	8815672	.	-	0	Parent=comp155605_c1_seq1.mrna1;Target=comp155605_c1_seq1 617 769 .
Chr2	stalkie_big_nohaplotig	CDS	8816316	8816345	.	-	0	Parent=comp155605_c1_seq1.mrna1;Target=comp155605_c1_seq1 770 799 .
Chr2	gffcl	locus	8854585	8867804	.	+	.	ID=RLOC_00014594;geneIDs=FBgn0085400.path1;transcripts=FBgn0085400.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8854585	8867804	.	+	.	ID=FBgn0085400.mrna1;geneID=FBgn0085400.path1;Name=FBgn0085400;Dir=sensecoverage=13.9;identity=99.6;matches=281;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014594
Chr2	stalkie_big_nohaplotig	exon	8854585	8854722	99	+	.	Parent=FBgn0085400.mrna1;Target=FBgn0085400 144 281 +
Chr2	stalkie_big_nohaplotig	exon	8867661	8867804	100	+	.	Parent=FBgn0085400.mrna1;Target=FBgn0085400 282 425 +
Chr2	gffcl	locus	8971980	8973110	.	-	.	ID=RLOC_00014595;geneIDs=comp135431_c0_seq1.path1;transcripts=comp135431_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	8971980	8973110	.	-	.	ID=comp135431_c0_seq1.mrna1;geneID=comp135431_c0_seq1.path1;Name=comp135431_c0_seq1;Dir=antisensecoverage=95.4;identity=98.0;matches=1056;mismatches=16;indels=6;unknowns=0;locus=RLOC_00014595
Chr2	stalkie_big_nohaplotig	exon	8971980	8972877	98	-	.	Parent=comp135431_c0_seq1.mrna1;Target=comp135431_c0_seq1 1 898 -
Chr2	stalkie_big_nohaplotig	exon	8972932	8973110	94	-	.	Parent=comp135431_c0_seq1.mrna1;Target=comp135431_c0_seq1 899 1073 -
Chr2	stalkie_big_nohaplotig	CDS	8972508	8972877	.	-	1	Parent=comp135431_c0_seq1.mrna1;Target=comp135431_c0_seq1 529 898 .
Chr2	stalkie_big_nohaplotig	CDS	8972932	8972951	.	-	0	Parent=comp135431_c0_seq1.mrna1;Target=comp135431_c0_seq1 899 918 .
Chr2	stalkie_big_nohaplotig	mRNA	9030933	9033641	.	-	.	ID=comp153303_c0_seq1.mrna1;geneID=comp153303_c0_seq1.path1;Name=comp153303_c0_seq1;Dir=sensecoverage=100.0;identity=98.5;matches=1965;mismatches=6;indels=24;unknowns=0;Target=comp153303_c0_seq1 409 492 +;locus=RLOC_00014596
Chr2	stalkie_big_nohaplotig	exon	9030933	9030955	100	-	.	Parent=comp153303_c0_seq1.mrna1;Target=comp153303_c0_seq1 1973 1995 +
Chr2	stalkie_big_nohaplotig	exon	9031694	9033641	98	-	.	Parent=comp153303_c0_seq1.mrna1;Target=comp153303_c0_seq1 1 1972 +
Chr2	stalkie_big_nohaplotig	CDS	9033150	9033233	.	-	0	Parent=comp153303_c0_seq1.mrna1
Chr2	gffcl	locus	9012271	9012888	.	+	.	ID=RLOC_00014597;geneIDs=FBgn0050094.1.path1;transcripts=FBgn0050094.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9012271	9012888	.	+	.	ID=FBgn0050094.1.mrna1;geneID=FBgn0050094.1.path1;Name=FBgn0050094.1;Dir=sensecoverage=100.0;identity=98.8;matches=560;mismatches=1;indels=6;unknowns=0;locus=RLOC_00014597
Chr2	stalkie_big_nohaplotig	exon	9012271	9012325	100	+	.	Parent=FBgn0050094.1.mrna1;Target=FBgn0050094.1 1 55 +
Chr2	stalkie_big_nohaplotig	exon	9012383	9012888	98	+	.	Parent=FBgn0050094.1.mrna1;Target=FBgn0050094.1 56 567 +
Chr2	stalkie_big_nohaplotig	CDS	9012271	9012325	.	+	0	Parent=FBgn0050094.1.mrna1;Target=FBgn0050094.1 1 55 +
Chr2	stalkie_big_nohaplotig	CDS	9012383	9012888	.	+	2	Parent=FBgn0050094.1.mrna1;Target=FBgn0050094.1 56 567 +
Chr2	gffcl	locus	9013298	9013764	.	-	.	ID=RLOC_00014598;geneIDs=comp150834_c1_seq1.path1;transcripts=comp150834_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9013298	9013764	.	-	.	ID=comp150834_c1_seq1.mrna1;geneID=comp150834_c1_seq1.path1;Name=comp150834_c1_seq1;Dir=indeterminatecoverage=99.8;identity=94.2;matches=453;mismatches=14;indels=14;unknowns=0;Target=comp150834_c1_seq1 482 2 .;CDS_Target=comp150834_c1_seq1 480 412 .;locus=RLOC_00014598
Chr2	stalkie_big_nohaplotig	exon	9013298	9013764	94	-	.	Parent=comp150834_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9013300	9013368	.	-	0	Parent=comp150834_c1_seq1.mrna1
Chr2	gffcl	locus	9014331	9015036	.	+	.	ID=RLOC_00014599;geneIDs=FBgn0050010.1.path1;transcripts=FBgn0050010.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9014331	9015036	.	+	.	ID=FBgn0050010.1.mrna1;geneID=FBgn0050010.1.path1;Name=FBgn0050010.1;Dir=sensecoverage=100.0;identity=98.1;matches=627;mismatches=12;indels=0;unknowns=0;locus=RLOC_00014599
Chr2	stalkie_big_nohaplotig	exon	9014331	9014471	97	+	.	Parent=FBgn0050010.1.mrna1;Target=FBgn0050010.1 1 141 +
Chr2	stalkie_big_nohaplotig	exon	9014539	9015036	98	+	.	Parent=FBgn0050010.1.mrna1;Target=FBgn0050010.1 142 639 +
Chr2	stalkie_big_nohaplotig	CDS	9014331	9014471	.	+	0	Parent=FBgn0050010.1.mrna1;Target=FBgn0050010.1 1 141 +
Chr2	stalkie_big_nohaplotig	CDS	9014539	9015036	.	+	0	Parent=FBgn0050010.1.mrna1;Target=FBgn0050010.1 142 639 +
Chr2	gffcl	locus	9015286	9016239	.	-	.	ID=RLOC_00014600;geneIDs=FBgn0011241.1.path1;transcripts=FBgn0011241.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9015286	9016239	.	-	.	ID=FBgn0011241.1.mrna1;geneID=FBgn0011241.1.path1;Name=FBgn0011241.1;Dir=sensecoverage=100.0;identity=98.7;matches=731;mismatches=10;indels=0;unknowns=0;locus=RLOC_00014600
Chr2	stalkie_big_nohaplotig	exon	9015286	9015759	98	-	.	Parent=FBgn0011241.1.mrna1;Target=FBgn0011241.1 268 741 +
Chr2	stalkie_big_nohaplotig	exon	9015816	9015919	99	-	.	Parent=FBgn0011241.1.mrna1;Target=FBgn0011241.1 164 267 +
Chr2	stalkie_big_nohaplotig	exon	9016025	9016089	96	-	.	Parent=FBgn0011241.1.mrna1;Target=FBgn0011241.1 99 163 +
Chr2	stalkie_big_nohaplotig	exon	9016142	9016239	98	-	.	Parent=FBgn0011241.1.mrna1;Target=FBgn0011241.1 1 98 +
Chr2	stalkie_big_nohaplotig	CDS	9015286	9015759	.	-	0	Parent=FBgn0011241.1.mrna1;Target=FBgn0011241.1 268 741 +
Chr2	stalkie_big_nohaplotig	CDS	9015816	9015919	.	-	2	Parent=FBgn0011241.1.mrna1;Target=FBgn0011241.1 164 267 +
Chr2	stalkie_big_nohaplotig	CDS	9016025	9016089	.	-	1	Parent=FBgn0011241.1.mrna1;Target=FBgn0011241.1 99 163 +
Chr2	stalkie_big_nohaplotig	CDS	9016142	9016239	.	-	0	Parent=FBgn0011241.1.mrna1;Target=FBgn0011241.1 1 98 +
Chr2	gffcl	locus	9017424	9018485	.	+	.	ID=RLOC_00014601;geneIDs=FBgn0034179.1.path1;transcripts=FBgn0034179.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9017424	9018485	.	+	.	ID=FBgn0034179.1.mrna1;geneID=FBgn0034179.1.path1;Name=FBgn0034179.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1061;mismatches=1;indels=0;unknowns=0;Target=FBgn0034179.1 1062 1 .;locus=RLOC_00014601
Chr2	stalkie_big_nohaplotig	exon	9017424	9018485	99	+	.	Parent=FBgn0034179.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9017424	9018485	.	+	0	Parent=FBgn0034179.1.mrna1
Chr2	gffcl	locus	9019148	9020421	.	+	.	ID=RLOC_00014602;geneIDs=FBgn0034646.1.path1;transcripts=FBgn0034646.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9019148	9020421	.	+	.	ID=FBgn0034646.1.mrna1;geneID=FBgn0034646.1.path1;Name=FBgn0034646.1;Dir=sensecoverage=100.0;identity=99.2;matches=1080;mismatches=9;indels=0;unknowns=0;locus=RLOC_00014602
Chr2	stalkie_big_nohaplotig	exon	9019148	9019609	99	+	.	Parent=FBgn0034646.1.mrna1;Target=FBgn0034646.1 1 462 +
Chr2	stalkie_big_nohaplotig	exon	9019669	9019894	99	+	.	Parent=FBgn0034646.1.mrna1;Target=FBgn0034646.1 463 688 +
Chr2	stalkie_big_nohaplotig	exon	9019965	9020287	98	+	.	Parent=FBgn0034646.1.mrna1;Target=FBgn0034646.1 689 1011 +
Chr2	stalkie_big_nohaplotig	exon	9020344	9020421	100	+	.	Parent=FBgn0034646.1.mrna1;Target=FBgn0034646.1 1012 1089 +
Chr2	stalkie_big_nohaplotig	CDS	9019148	9019609	.	+	0	Parent=FBgn0034646.1.mrna1;Target=FBgn0034646.1 1 462 +
Chr2	stalkie_big_nohaplotig	CDS	9019669	9019894	.	+	0	Parent=FBgn0034646.1.mrna1;Target=FBgn0034646.1 463 688 +
Chr2	stalkie_big_nohaplotig	CDS	9019965	9020287	.	+	2	Parent=FBgn0034646.1.mrna1;Target=FBgn0034646.1 689 1011 +
Chr2	stalkie_big_nohaplotig	CDS	9020344	9020421	.	+	0	Parent=FBgn0034646.1.mrna1;Target=FBgn0034646.1 1012 1089 +
Chr2	gffcl	locus	9020640	9021042	.	-	.	ID=RLOC_00014603;geneIDs=AAEL007054.1.path1;transcripts=AAEL007054.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9020640	9021042	.	-	.	ID=AAEL007054.1.mrna1;geneID=AAEL007054.1.path1;Name=AAEL007054.1;Dir=sensecoverage=100.0;identity=99.4;matches=340;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014603
Chr2	stalkie_big_nohaplotig	exon	9020640	9020847	99	-	.	Parent=AAEL007054.1.mrna1;Target=AAEL007054.1 135 342 +
Chr2	stalkie_big_nohaplotig	exon	9020909	9021042	100	-	.	Parent=AAEL007054.1.mrna1;Target=AAEL007054.1 1 134 +
Chr2	stalkie_big_nohaplotig	CDS	9020640	9020847	.	-	1	Parent=AAEL007054.1.mrna1;Target=AAEL007054.1 135 342 +
Chr2	stalkie_big_nohaplotig	CDS	9020909	9021042	.	-	0	Parent=AAEL007054.1.mrna1;Target=AAEL007054.1 1 134 +
Chr2	gffcl	locus	9055549	9056020	.	+	.	ID=RLOC_00014604;geneIDs=comp142195_c1_seq1.path1;transcripts=comp142195_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9055549	9056020	.	+	.	ID=comp142195_c1_seq1.mrna1;geneID=comp142195_c1_seq1.path1;Name=comp142195_c1_seq1;Dir=indeterminatecoverage=98.6;identity=86.4;matches=408;mismatches=28;indels=36;unknowns=0;Target=comp142195_c1_seq1 442 7 .;CDS_Target=comp142195_c1_seq1 442 287 .;locus=RLOC_00014604
Chr2	stalkie_big_nohaplotig	exon	9055549	9056020	86	+	.	Parent=comp142195_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9055833	9056020	.	+	0	Parent=comp142195_c1_seq1.mrna1
Chr2	gffcl	locus	9104363	9105337	.	-	.	ID=RLOC_00014605;geneIDs=FBgn0034647.1.path1;transcripts=FBgn0034647.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9104363	9105337	.	-	.	ID=FBgn0034647.1.mrna1;geneID=FBgn0034647.1.path1;Name=FBgn0034647.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=969;mismatches=6;indels=0;unknowns=0;Target=FBgn0034647.1 975 1 .;locus=RLOC_00014605
Chr2	stalkie_big_nohaplotig	exon	9104363	9105337	99	-	.	Parent=FBgn0034647.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9104363	9105337	.	-	0	Parent=FBgn0034647.1.mrna1
Chr2	gffcl	locus	9105994	9106663	.	-	.	ID=RLOC_00014606;geneIDs=comp142516_c0_seq1.path2;transcripts=comp142516_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	9105994	9106663	.	-	.	ID=comp142516_c0_seq1.mrna2;geneID=comp142516_c0_seq1.path2;Name=comp142516_c0_seq1;Dir=indeterminatecoverage=78.8;identity=98.0;matches=399;mismatches=8;indels=0;unknowns=0;Target=comp142516_c0_seq1 179 168 .;locus=RLOC_00014606
Chr2	stalkie_big_nohaplotig	exon	9105994	9106340	99	-	.	Parent=comp142516_c0_seq1.mrna2;Target=comp142516_c0_seq1 561 215 .
Chr2	stalkie_big_nohaplotig	exon	9106604	9106663	91	-	.	Parent=comp142516_c0_seq1.mrna2;Target=comp142516_c0_seq1 179 120 .
Chr2	stalkie_big_nohaplotig	CDS	9106604	9106615	.	-	0	Parent=comp142516_c0_seq1.mrna2
Chr2	gffcl	locus	9119122	9120204	.	+	.	ID=RLOC_00014607;geneIDs=FBgn0034179.2.path1;transcripts=FBgn0034179.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9119122	9120204	.	+	.	ID=FBgn0034179.2.mrna1;geneID=FBgn0034179.2.path1;Name=FBgn0034179.2;Dir=indeterminatecoverage=98.9;identity=99.8;matches=1081;mismatches=2;indels=0;unknowns=0;Target=FBgn0034179.2 1083 1 .;locus=RLOC_00014607
Chr2	stalkie_big_nohaplotig	exon	9119122	9120204	99	+	.	Parent=FBgn0034179.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9119122	9120204	.	+	0	Parent=FBgn0034179.2.mrna1
Chr2	gffcl	locus	9125581	9132540	.	+	.	ID=RLOC_00014608;geneIDs=FBgn0027580.1.path1;transcripts=FBgn0027580.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9125581	9132540	.	+	.	ID=FBgn0027580.1.mrna1;geneID=FBgn0027580.1.path1;Name=FBgn0027580.1;Dir=sensecoverage=100.0;identity=99.3;matches=3573;mismatches=24;indels=0;unknowns=0;locus=RLOC_00014608
Chr2	stalkie_big_nohaplotig	exon	9125581	9125685	100	+	.	Parent=FBgn0027580.1.mrna1;Target=FBgn0027580.1 1 105 +
Chr2	stalkie_big_nohaplotig	exon	9125758	9126647	99	+	.	Parent=FBgn0027580.1.mrna1;Target=FBgn0027580.1 106 995 +
Chr2	stalkie_big_nohaplotig	exon	9126702	9127321	99	+	.	Parent=FBgn0027580.1.mrna1;Target=FBgn0027580.1 996 1615 +
Chr2	stalkie_big_nohaplotig	exon	9128592	9128639	100	+	.	Parent=FBgn0027580.1.mrna1;Target=FBgn0027580.1 1616 1663 +
Chr2	stalkie_big_nohaplotig	exon	9129172	9129569	99	+	.	Parent=FBgn0027580.1.mrna1;Target=FBgn0027580.1 1664 2061 +
Chr2	stalkie_big_nohaplotig	exon	9130884	9131143	98	+	.	Parent=FBgn0027580.1.mrna1;Target=FBgn0027580.1 2062 2321 +
Chr2	stalkie_big_nohaplotig	exon	9131210	9132239	99	+	.	Parent=FBgn0027580.1.mrna1;Target=FBgn0027580.1 2322 3351 +
Chr2	stalkie_big_nohaplotig	exon	9132295	9132540	99	+	.	Parent=FBgn0027580.1.mrna1;Target=FBgn0027580.1 3352 3597 +
Chr2	stalkie_big_nohaplotig	CDS	9125581	9125685	.	+	0	Parent=FBgn0027580.1.mrna1;Target=FBgn0027580.1 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	9125758	9126647	.	+	0	Parent=FBgn0027580.1.mrna1;Target=FBgn0027580.1 106 995 +
Chr2	stalkie_big_nohaplotig	CDS	9126702	9127321	.	+	1	Parent=FBgn0027580.1.mrna1;Target=FBgn0027580.1 996 1615 +
Chr2	stalkie_big_nohaplotig	CDS	9128592	9128639	.	+	2	Parent=FBgn0027580.1.mrna1;Target=FBgn0027580.1 1616 1663 +
Chr2	stalkie_big_nohaplotig	CDS	9129172	9129569	.	+	2	Parent=FBgn0027580.1.mrna1;Target=FBgn0027580.1 1664 2061 +
Chr2	stalkie_big_nohaplotig	CDS	9130884	9131143	.	+	0	Parent=FBgn0027580.1.mrna1;Target=FBgn0027580.1 2062 2321 +
Chr2	stalkie_big_nohaplotig	CDS	9131210	9132239	.	+	1	Parent=FBgn0027580.1.mrna1;Target=FBgn0027580.1 2322 3351 +
Chr2	stalkie_big_nohaplotig	CDS	9132295	9132540	.	+	0	Parent=FBgn0027580.1.mrna1;Target=FBgn0027580.1 3352 3597 +
Chr2	gffcl	locus	9134423	9136873	.	-	.	ID=RLOC_00014609;geneIDs=FBgn0033454.1.path1;transcripts=FBgn0033454.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9134423	9136873	.	-	.	ID=FBgn0033454.1.mrna1;geneID=FBgn0033454.1.path1;Name=FBgn0033454.1;Dir=sensecoverage=100.0;identity=99.6;matches=2378;mismatches=10;indels=0;unknowns=0;locus=RLOC_00014609
Chr2	stalkie_big_nohaplotig	exon	9134423	9136778	99	-	.	Parent=FBgn0033454.1.mrna1;Target=FBgn0033454.1 33 2388 +
Chr2	stalkie_big_nohaplotig	exon	9136842	9136873	100	-	.	Parent=FBgn0033454.1.mrna1;Target=FBgn0033454.1 1 32 +
Chr2	stalkie_big_nohaplotig	CDS	9134423	9136778	.	-	1	Parent=FBgn0033454.1.mrna1;Target=FBgn0033454.1 33 2388 +
Chr2	stalkie_big_nohaplotig	CDS	9136842	9136873	.	-	0	Parent=FBgn0033454.1.mrna1;Target=FBgn0033454.1 1 32 +
Chr2	gffcl	locus	9138347	9139243	.	+	.	ID=RLOC_00014610;geneIDs=FBgn0023175.1.path1;transcripts=FBgn0023175.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9138347	9139243	.	+	.	ID=FBgn0023175.1.mrna1;geneID=FBgn0023175.1.path1;Name=FBgn0023175.1;Dir=sensecoverage=100.0;identity=99.6;matches=765;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014610
Chr2	stalkie_big_nohaplotig	exon	9138347	9138376	100	+	.	Parent=FBgn0023175.1.mrna1;Target=FBgn0023175.1 1 30 +
Chr2	stalkie_big_nohaplotig	exon	9138443	9139011	100	+	.	Parent=FBgn0023175.1.mrna1;Target=FBgn0023175.1 31 599 +
Chr2	stalkie_big_nohaplotig	exon	9139075	9139243	98	+	.	Parent=FBgn0023175.1.mrna1;Target=FBgn0023175.1 600 768 +
Chr2	stalkie_big_nohaplotig	CDS	9138347	9138376	.	+	0	Parent=FBgn0023175.1.mrna1;Target=FBgn0023175.1 1 30 +
Chr2	stalkie_big_nohaplotig	CDS	9138443	9139011	.	+	0	Parent=FBgn0023175.1.mrna1;Target=FBgn0023175.1 31 599 +
Chr2	stalkie_big_nohaplotig	CDS	9139075	9139243	.	+	1	Parent=FBgn0023175.1.mrna1;Target=FBgn0023175.1 600 768 +
Chr2	gffcl	locus	9141035	9142312	.	+	.	ID=RLOC_00014611;geneIDs=FBgn0061356.1.path1;transcripts=FBgn0061356.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9141035	9142312	.	+	.	ID=FBgn0061356.1.mrna1;geneID=FBgn0061356.1.path1;Name=FBgn0061356.1;Dir=sensecoverage=100.0;identity=99.6;matches=1130;mismatches=4;indels=0;unknowns=0;locus=RLOC_00014611
Chr2	stalkie_big_nohaplotig	exon	9141035	9141198	100	+	.	Parent=FBgn0061356.1.mrna1;Target=FBgn0061356.1 1 164 +
Chr2	stalkie_big_nohaplotig	exon	9141257	9141529	99	+	.	Parent=FBgn0061356.1.mrna1;Target=FBgn0061356.1 165 437 +
Chr2	stalkie_big_nohaplotig	exon	9141616	9142312	99	+	.	Parent=FBgn0061356.1.mrna1;Target=FBgn0061356.1 438 1134 +
Chr2	stalkie_big_nohaplotig	CDS	9141035	9141198	.	+	0	Parent=FBgn0061356.1.mrna1;Target=FBgn0061356.1 1 164 +
Chr2	stalkie_big_nohaplotig	CDS	9141257	9141529	.	+	1	Parent=FBgn0061356.1.mrna1;Target=FBgn0061356.1 165 437 +
Chr2	stalkie_big_nohaplotig	CDS	9141616	9142312	.	+	1	Parent=FBgn0061356.1.mrna1;Target=FBgn0061356.1 438 1134 +
Chr2	gffcl	locus	9142390	9143065	.	-	.	ID=RLOC_00014612;geneIDs=comp141266_c0_seq1.path1;transcripts=comp141266_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9142390	9143065	.	-	.	ID=comp141266_c0_seq1.mrna1;geneID=comp141266_c0_seq1.path1;Name=comp141266_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=661;mismatches=15;indels=4;unknowns=0;Target=comp141266_c0_seq1 680 1 .;CDS_Target=comp141266_c0_seq1 151 50 .;locus=RLOC_00014612
Chr2	stalkie_big_nohaplotig	exon	9142390	9143065	97	-	.	Parent=comp141266_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9142915	9143016	.	-	0	Parent=comp141266_c0_seq1.mrna1
Chr2	gffcl	locus	9143805	9145408	.	+	.	ID=RLOC_00014613;geneIDs=FBgn0034177.1.path1;transcripts=FBgn0034177.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9143805	9145408	.	+	.	ID=FBgn0034177.1.mrna1;geneID=FBgn0034177.1.path1;Name=FBgn0034177.1;Dir=sensecoverage=100.0;identity=98.5;matches=1407;mismatches=21;indels=0;unknowns=0;locus=RLOC_00014613
Chr2	stalkie_big_nohaplotig	exon	9143805	9143939	99	+	.	Parent=FBgn0034177.1.mrna1;Target=FBgn0034177.1 1 135 +
Chr2	stalkie_big_nohaplotig	exon	9143993	9144200	98	+	.	Parent=FBgn0034177.1.mrna1;Target=FBgn0034177.1 136 343 +
Chr2	stalkie_big_nohaplotig	exon	9144263	9144489	99	+	.	Parent=FBgn0034177.1.mrna1;Target=FBgn0034177.1 344 570 +
Chr2	stalkie_big_nohaplotig	exon	9144551	9145408	98	+	.	Parent=FBgn0034177.1.mrna1;Target=FBgn0034177.1 571 1428 +
Chr2	stalkie_big_nohaplotig	CDS	9143805	9143939	.	+	0	Parent=FBgn0034177.1.mrna1;Target=FBgn0034177.1 1 135 +
Chr2	stalkie_big_nohaplotig	CDS	9143993	9144200	.	+	0	Parent=FBgn0034177.1.mrna1;Target=FBgn0034177.1 136 343 +
Chr2	stalkie_big_nohaplotig	CDS	9144263	9144489	.	+	2	Parent=FBgn0034177.1.mrna1;Target=FBgn0034177.1 344 570 +
Chr2	stalkie_big_nohaplotig	CDS	9144551	9145408	.	+	0	Parent=FBgn0034177.1.mrna1;Target=FBgn0034177.1 571 1428 +
Chr2	gffcl	locus	9145631	9147170	.	-	.	ID=RLOC_00014614;geneIDs=FBgn0026402.1.path1;transcripts=FBgn0026402.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9145631	9147170	.	-	.	ID=FBgn0026402.1.mrna1;geneID=FBgn0026402.1.path1;Name=FBgn0026402.1;Dir=sensecoverage=100.0;identity=99.4;matches=1080;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014614
Chr2	stalkie_big_nohaplotig	exon	9145631	9145743	99	-	.	Parent=FBgn0026402.1.mrna1;Target=FBgn0026402.1 974 1086 +
Chr2	stalkie_big_nohaplotig	exon	9145981	9146431	99	-	.	Parent=FBgn0026402.1.mrna1;Target=FBgn0026402.1 523 973 +
Chr2	stalkie_big_nohaplotig	exon	9146487	9146561	100	-	.	Parent=FBgn0026402.1.mrna1;Target=FBgn0026402.1 448 522 +
Chr2	stalkie_big_nohaplotig	exon	9146614	9146816	100	-	.	Parent=FBgn0026402.1.mrna1;Target=FBgn0026402.1 245 447 +
Chr2	stalkie_big_nohaplotig	exon	9146875	9147089	99	-	.	Parent=FBgn0026402.1.mrna1;Target=FBgn0026402.1 30 244 +
Chr2	stalkie_big_nohaplotig	exon	9147142	9147170	100	-	.	Parent=FBgn0026402.1.mrna1;Target=FBgn0026402.1 1 29 +
Chr2	stalkie_big_nohaplotig	CDS	9145631	9145743	.	-	2	Parent=FBgn0026402.1.mrna1;Target=FBgn0026402.1 974 1086 +
Chr2	stalkie_big_nohaplotig	CDS	9145981	9146431	.	-	0	Parent=FBgn0026402.1.mrna1;Target=FBgn0026402.1 523 973 +
Chr2	stalkie_big_nohaplotig	CDS	9146487	9146561	.	-	0	Parent=FBgn0026402.1.mrna1;Target=FBgn0026402.1 448 522 +
Chr2	stalkie_big_nohaplotig	CDS	9146614	9146816	.	-	2	Parent=FBgn0026402.1.mrna1;Target=FBgn0026402.1 245 447 +
Chr2	stalkie_big_nohaplotig	CDS	9146875	9147089	.	-	1	Parent=FBgn0026402.1.mrna1;Target=FBgn0026402.1 30 244 +
Chr2	stalkie_big_nohaplotig	CDS	9147142	9147170	.	-	0	Parent=FBgn0026402.1.mrna1;Target=FBgn0026402.1 1 29 +
Chr2	gffcl	locus	9149716	9153599	.	-	.	ID=RLOC_00014615;geneIDs=FBgn0033564.1.path1;transcripts=FBgn0033564.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9149716	9153599	.	-	.	ID=FBgn0033564.1.mrna1;geneID=FBgn0033564.1.path1;Name=FBgn0033564.1;Dir=sensecoverage=100.0;identity=99.9;matches=2760;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014615
Chr2	stalkie_big_nohaplotig	exon	9149716	9149858	99	-	.	Parent=FBgn0033564.1.mrna1;Target=FBgn0033564.1 2621 2763 +
Chr2	stalkie_big_nohaplotig	exon	9149920	9151171	100	-	.	Parent=FBgn0033564.1.mrna1;Target=FBgn0033564.1 1369 2620 +
Chr2	stalkie_big_nohaplotig	exon	9151801	9152574	99	-	.	Parent=FBgn0033564.1.mrna1;Target=FBgn0033564.1 595 1368 +
Chr2	stalkie_big_nohaplotig	exon	9152637	9153173	100	-	.	Parent=FBgn0033564.1.mrna1;Target=FBgn0033564.1 58 594 +
Chr2	stalkie_big_nohaplotig	exon	9153543	9153599	98	-	.	Parent=FBgn0033564.1.mrna1;Target=FBgn0033564.1 1 57 +
Chr2	stalkie_big_nohaplotig	CDS	9149716	9149858	.	-	2	Parent=FBgn0033564.1.mrna1;Target=FBgn0033564.1 2621 2763 +
Chr2	stalkie_big_nohaplotig	CDS	9149920	9151171	.	-	0	Parent=FBgn0033564.1.mrna1;Target=FBgn0033564.1 1369 2620 +
Chr2	stalkie_big_nohaplotig	CDS	9151801	9152574	.	-	0	Parent=FBgn0033564.1.mrna1;Target=FBgn0033564.1 595 1368 +
Chr2	stalkie_big_nohaplotig	CDS	9152637	9153173	.	-	0	Parent=FBgn0033564.1.mrna1;Target=FBgn0033564.1 58 594 +
Chr2	stalkie_big_nohaplotig	CDS	9153543	9153599	.	-	0	Parent=FBgn0033564.1.mrna1;Target=FBgn0033564.1 1 57 +
Chr2	gffcl	locus	9153818	9155403	.	+	.	ID=RLOC_00014616;geneIDs=FBgn0033453.1.path1;transcripts=FBgn0033453.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9153818	9155403	.	+	.	ID=FBgn0033453.1.mrna1;geneID=FBgn0033453.1.path1;Name=FBgn0033453.1;Dir=sensecoverage=100.0;identity=99.8;matches=943;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014616
Chr2	stalkie_big_nohaplotig	exon	9153818	9153851	100	+	.	Parent=FBgn0033453.1.mrna1;Target=FBgn0033453.1 1 34 +
Chr2	stalkie_big_nohaplotig	exon	9153918	9154462	99	+	.	Parent=FBgn0033453.1.mrna1;Target=FBgn0033453.1 35 579 +
Chr2	stalkie_big_nohaplotig	exon	9154523	9154808	99	+	.	Parent=FBgn0033453.1.mrna1;Target=FBgn0033453.1 580 865 +
Chr2	stalkie_big_nohaplotig	exon	9155324	9155403	100	+	.	Parent=FBgn0033453.1.mrna1;Target=FBgn0033453.1 866 945 +
Chr2	stalkie_big_nohaplotig	CDS	9153818	9153851	.	+	0	Parent=FBgn0033453.1.mrna1;Target=FBgn0033453.1 1 34 +
Chr2	stalkie_big_nohaplotig	CDS	9153918	9154462	.	+	2	Parent=FBgn0033453.1.mrna1;Target=FBgn0033453.1 35 579 +
Chr2	stalkie_big_nohaplotig	CDS	9154523	9154808	.	+	0	Parent=FBgn0033453.1.mrna1;Target=FBgn0033453.1 580 865 +
Chr2	stalkie_big_nohaplotig	CDS	9155324	9155403	.	+	2	Parent=FBgn0033453.1.mrna1;Target=FBgn0033453.1 866 945 +
Chr2	gffcl	locus	9156802	9157718	.	-	.	ID=RLOC_00014617;geneIDs=FBgn0023180.1.path1;transcripts=FBgn0023180.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9156802	9157718	.	-	.	ID=FBgn0023180.1.mrna1;geneID=FBgn0023180.1.path1;Name=FBgn0023180.1;Dir=sensecoverage=100.0;identity=99.7;matches=748;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014617
Chr2	stalkie_big_nohaplotig	exon	9156802	9157323	100	-	.	Parent=FBgn0023180.1.mrna1;Target=FBgn0023180.1 229 750 +
Chr2	stalkie_big_nohaplotig	exon	9157419	9157542	99	-	.	Parent=FBgn0023180.1.mrna1;Target=FBgn0023180.1 105 228 +
Chr2	stalkie_big_nohaplotig	exon	9157615	9157718	99	-	.	Parent=FBgn0023180.1.mrna1;Target=FBgn0023180.1 1 104 +
Chr2	stalkie_big_nohaplotig	CDS	9156802	9157323	.	-	0	Parent=FBgn0023180.1.mrna1;Target=FBgn0023180.1 229 750 +
Chr2	stalkie_big_nohaplotig	CDS	9157419	9157542	.	-	1	Parent=FBgn0023180.1.mrna1;Target=FBgn0023180.1 105 228 +
Chr2	stalkie_big_nohaplotig	CDS	9157615	9157718	.	-	0	Parent=FBgn0023180.1.mrna1;Target=FBgn0023180.1 1 104 +
Chr2	gffcl	locus	9205237	9207833	.	+	.	ID=RLOC_00014619;geneIDs=FBgn0050443.1.path1;transcripts=FBgn0050443.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9205237	9207833	.	+	.	ID=FBgn0050443.1.mrna1;geneID=FBgn0050443.1.path1;Name=FBgn0050443.1;Dir=sensecoverage=98.7;identity=99.1;matches=1826;mismatches=7;indels=9;unknowns=0;locus=RLOC_00014619
Chr2	stalkie_big_nohaplotig	exon	9205237	9205653	97	+	.	Parent=FBgn0050443.1.mrna1;Target=FBgn0050443.1 25 432 +
Chr2	stalkie_big_nohaplotig	exon	9205728	9205919	100	+	.	Parent=FBgn0050443.1.mrna1;Target=FBgn0050443.1 433 624 +
Chr2	stalkie_big_nohaplotig	exon	9205986	9206152	99	+	.	Parent=FBgn0050443.1.mrna1;Target=FBgn0050443.1 625 791 +
Chr2	stalkie_big_nohaplotig	exon	9206562	9206681	100	+	.	Parent=FBgn0050443.1.mrna1;Target=FBgn0050443.1 792 911 +
Chr2	stalkie_big_nohaplotig	exon	9206759	9207139	99	+	.	Parent=FBgn0050443.1.mrna1;Target=FBgn0050443.1 912 1292 +
Chr2	stalkie_big_nohaplotig	exon	9207208	9207718	99	+	.	Parent=FBgn0050443.1.mrna1;Target=FBgn0050443.1 1293 1803 +
Chr2	stalkie_big_nohaplotig	exon	9207780	9207833	100	+	.	Parent=FBgn0050443.1.mrna1;Target=FBgn0050443.1 1804 1857 +
Chr2	stalkie_big_nohaplotig	CDS	9205237	9205653	.	+	0	Parent=FBgn0050443.1.mrna1;Target=FBgn0050443.1 25 432 +
Chr2	stalkie_big_nohaplotig	CDS	9205728	9205919	.	+	0	Parent=FBgn0050443.1.mrna1;Target=FBgn0050443.1 433 624 +
Chr2	stalkie_big_nohaplotig	CDS	9205986	9206152	.	+	0	Parent=FBgn0050443.1.mrna1;Target=FBgn0050443.1 625 791 +
Chr2	stalkie_big_nohaplotig	CDS	9206562	9206681	.	+	1	Parent=FBgn0050443.1.mrna1;Target=FBgn0050443.1 792 911 +
Chr2	stalkie_big_nohaplotig	CDS	9206759	9207139	.	+	1	Parent=FBgn0050443.1.mrna1;Target=FBgn0050443.1 912 1292 +
Chr2	stalkie_big_nohaplotig	CDS	9207208	9207718	.	+	1	Parent=FBgn0050443.1.mrna1;Target=FBgn0050443.1 1293 1803 +
Chr2	stalkie_big_nohaplotig	CDS	9207780	9207833	.	+	0	Parent=FBgn0050443.1.mrna1;Target=FBgn0050443.1 1804 1857 +
Chr2	gffcl	locus	9209218	9210809	.	-	.	ID=RLOC_00014620;geneIDs=FBgn0027513.1.path1;transcripts=FBgn0027513.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9209218	9210809	.	-	.	ID=FBgn0027513.1.mrna1;geneID=FBgn0027513.1.path1;Name=FBgn0027513.1;Dir=sensecoverage=100.0;identity=98.4;matches=1514;mismatches=13;indels=12;unknowns=0;locus=RLOC_00014620
Chr2	stalkie_big_nohaplotig	exon	9209218	9209894	96	-	.	Parent=FBgn0027513.1.mrna1;Target=FBgn0027513.1 857 1533 +
Chr2	stalkie_big_nohaplotig	exon	9209954	9210809	99	-	.	Parent=FBgn0027513.1.mrna1;Target=FBgn0027513.1 1 856 +
Chr2	stalkie_big_nohaplotig	CDS	9209218	9209894	.	-	2	Parent=FBgn0027513.1.mrna1;Target=FBgn0027513.1 857 1533 +
Chr2	stalkie_big_nohaplotig	CDS	9209954	9210809	.	-	0	Parent=FBgn0027513.1.mrna1;Target=FBgn0027513.1 1 856 +
Chr2	gffcl	locus	9212083	9218158	.	-	.	ID=RLOC_00014621;geneIDs=FBgn0029131.1.path1;transcripts=FBgn0029131.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9212083	9218158	.	-	.	ID=FBgn0029131.1.mrna1;geneID=FBgn0029131.1.path1;Name=FBgn0029131.1;Dir=sensecoverage=100.0;identity=99.9;matches=806;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014621
Chr2	stalkie_big_nohaplotig	exon	9212083	9212538	99	-	.	Parent=FBgn0029131.1.mrna1;Target=FBgn0029131.1 352 807 +
Chr2	stalkie_big_nohaplotig	exon	9212621	9212761	100	-	.	Parent=FBgn0029131.1.mrna1;Target=FBgn0029131.1 211 351 +
Chr2	stalkie_big_nohaplotig	exon	9217949	9218158	100	-	.	Parent=FBgn0029131.1.mrna1;Target=FBgn0029131.1 1 210 +
Chr2	stalkie_big_nohaplotig	CDS	9212083	9212538	.	-	0	Parent=FBgn0029131.1.mrna1;Target=FBgn0029131.1 352 807 +
Chr2	stalkie_big_nohaplotig	CDS	9212621	9212761	.	-	0	Parent=FBgn0029131.1.mrna1;Target=FBgn0029131.1 211 351 +
Chr2	stalkie_big_nohaplotig	CDS	9217949	9218158	.	-	0	Parent=FBgn0029131.1.mrna1;Target=FBgn0029131.1 1 210 +
Chr2	gffcl	locus	9220673	9223131	.	-	.	ID=RLOC_00014622;geneIDs=FBgn0040491.1.path1;transcripts=FBgn0040491.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9220673	9223131	.	-	.	ID=FBgn0040491.1.mrna1;geneID=FBgn0040491.1.path1;Name=FBgn0040491.1;Dir=sensecoverage=100.0;identity=100.0;matches=882;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014622
Chr2	stalkie_big_nohaplotig	exon	9220673	9220810	100	-	.	Parent=FBgn0040491.1.mrna1;Target=FBgn0040491.1 745 882 +
Chr2	stalkie_big_nohaplotig	exon	9222230	9222535	100	-	.	Parent=FBgn0040491.1.mrna1;Target=FBgn0040491.1 439 744 +
Chr2	stalkie_big_nohaplotig	exon	9222612	9222758	100	-	.	Parent=FBgn0040491.1.mrna1;Target=FBgn0040491.1 292 438 +
Chr2	stalkie_big_nohaplotig	exon	9222841	9223131	100	-	.	Parent=FBgn0040491.1.mrna1;Target=FBgn0040491.1 1 291 +
Chr2	stalkie_big_nohaplotig	CDS	9220673	9220810	.	-	0	Parent=FBgn0040491.1.mrna1;Target=FBgn0040491.1 745 882 +
Chr2	stalkie_big_nohaplotig	CDS	9222230	9222535	.	-	0	Parent=FBgn0040491.1.mrna1;Target=FBgn0040491.1 439 744 +
Chr2	stalkie_big_nohaplotig	CDS	9222612	9222758	.	-	0	Parent=FBgn0040491.1.mrna1;Target=FBgn0040491.1 292 438 +
Chr2	stalkie_big_nohaplotig	CDS	9222841	9223131	.	-	0	Parent=FBgn0040491.1.mrna1;Target=FBgn0040491.1 1 291 +
Chr2	gffcl	locus	9246045	9248284	.	+	.	ID=RLOC_00014623;geneIDs=FBgn0034210.1.path1;transcripts=FBgn0034210.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9246045	9248284	.	+	.	ID=FBgn0034210.1.mrna1;geneID=FBgn0034210.1.path1;Name=FBgn0034210.1;Dir=sensecoverage=100.0;identity=99.7;matches=1523;mismatches=4;indels=0;unknowns=0;locus=RLOC_00014623
Chr2	stalkie_big_nohaplotig	exon	9246045	9246212	100	+	.	Parent=FBgn0034210.1.mrna1;Target=FBgn0034210.1 1 168 +
Chr2	stalkie_big_nohaplotig	exon	9246809	9246899	100	+	.	Parent=FBgn0034210.1.mrna1;Target=FBgn0034210.1 169 259 +
Chr2	stalkie_big_nohaplotig	exon	9246962	9247708	99	+	.	Parent=FBgn0034210.1.mrna1;Target=FBgn0034210.1 260 1006 +
Chr2	stalkie_big_nohaplotig	exon	9247764	9248284	100	+	.	Parent=FBgn0034210.1.mrna1;Target=FBgn0034210.1 1007 1527 +
Chr2	stalkie_big_nohaplotig	CDS	9246045	9246212	.	+	0	Parent=FBgn0034210.1.mrna1;Target=FBgn0034210.1 1 168 +
Chr2	stalkie_big_nohaplotig	CDS	9246809	9246899	.	+	0	Parent=FBgn0034210.1.mrna1;Target=FBgn0034210.1 169 259 +
Chr2	stalkie_big_nohaplotig	CDS	9246962	9247708	.	+	2	Parent=FBgn0034210.1.mrna1;Target=FBgn0034210.1 260 1006 +
Chr2	stalkie_big_nohaplotig	CDS	9247764	9248284	.	+	2	Parent=FBgn0034210.1.mrna1;Target=FBgn0034210.1 1007 1527 +
Chr2	gffcl	locus	9251199	9252578	.	+	.	ID=RLOC_00014624;geneIDs=comp151939_c1_seq1.path1;transcripts=comp151939_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9251199	9252578	.	+	.	ID=comp151939_c1_seq1.mrna1;geneID=comp151939_c1_seq1.path1;Name=comp151939_c1_seq1;Dir=antisensecoverage=98.7;identity=99.9;matches=946;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014624
Chr2	stalkie_big_nohaplotig	exon	9251199	9251318	100	+	.	Parent=comp151939_c1_seq1.mrna1;Target=comp151939_c1_seq1 828 947 -
Chr2	stalkie_big_nohaplotig	exon	9251389	9251447	98	+	.	Parent=comp151939_c1_seq1.mrna1;Target=comp151939_c1_seq1 769 827 -
Chr2	stalkie_big_nohaplotig	exon	9251503	9251696	100	+	.	Parent=comp151939_c1_seq1.mrna1;Target=comp151939_c1_seq1 575 768 -
Chr2	stalkie_big_nohaplotig	exon	9251753	9251847	100	+	.	Parent=comp151939_c1_seq1.mrna1;Target=comp151939_c1_seq1 480 574 -
Chr2	stalkie_big_nohaplotig	exon	9251980	9252126	100	+	.	Parent=comp151939_c1_seq1.mrna1;Target=comp151939_c1_seq1 333 479 -
Chr2	stalkie_big_nohaplotig	exon	9252183	9252311	100	+	.	Parent=comp151939_c1_seq1.mrna1;Target=comp151939_c1_seq1 204 332 -
Chr2	stalkie_big_nohaplotig	exon	9252376	9252578	100	+	.	Parent=comp151939_c1_seq1.mrna1;Target=comp151939_c1_seq1 1 203 -
Chr2	stalkie_big_nohaplotig	CDS	9251539	9251696	.	+	0	Parent=comp151939_c1_seq1.mrna1;Target=comp151939_c1_seq1 575 732 .
Chr2	stalkie_big_nohaplotig	CDS	9251753	9251847	.	+	1	Parent=comp151939_c1_seq1.mrna1;Target=comp151939_c1_seq1 480 574 .
Chr2	stalkie_big_nohaplotig	CDS	9251980	9252126	.	+	2	Parent=comp151939_c1_seq1.mrna1;Target=comp151939_c1_seq1 333 479 .
Chr2	stalkie_big_nohaplotig	CDS	9252183	9252311	.	+	2	Parent=comp151939_c1_seq1.mrna1;Target=comp151939_c1_seq1 204 332 .
Chr2	stalkie_big_nohaplotig	CDS	9252376	9252383	.	+	2	Parent=comp151939_c1_seq1.mrna1;Target=comp151939_c1_seq1 196 203 .
Chr2	gffcl	locus	9272787	9426342	.	+	.	ID=RLOC_00014625;geneIDs=FBgn0261642.1.path1;transcripts=FBgn0261642.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9272787	9426342	.	+	.	ID=FBgn0261642.1.mrna1;geneID=FBgn0261642.1.path1;Name=FBgn0261642.1;Dir=sensecoverage=100.0;identity=100.0;matches=756;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014625
Chr2	stalkie_big_nohaplotig	exon	9272787	9272984	100	+	.	Parent=FBgn0261642.1.mrna1;Target=FBgn0261642.1 1 198 +
Chr2	stalkie_big_nohaplotig	exon	9377528	9377698	100	+	.	Parent=FBgn0261642.1.mrna1;Target=FBgn0261642.1 199 369 +
Chr2	stalkie_big_nohaplotig	exon	9381787	9381969	100	+	.	Parent=FBgn0261642.1.mrna1;Target=FBgn0261642.1 370 552 +
Chr2	stalkie_big_nohaplotig	exon	9398928	9398969	100	+	.	Parent=FBgn0261642.1.mrna1;Target=FBgn0261642.1 553 594 +
Chr2	stalkie_big_nohaplotig	exon	9400814	9400940	100	+	.	Parent=FBgn0261642.1.mrna1;Target=FBgn0261642.1 595 721 +
Chr2	stalkie_big_nohaplotig	exon	9426308	9426342	100	+	.	Parent=FBgn0261642.1.mrna1;Target=FBgn0261642.1 722 756 +
Chr2	stalkie_big_nohaplotig	CDS	9272787	9272984	.	+	0	Parent=FBgn0261642.1.mrna1;Target=FBgn0261642.1 1 198 +
Chr2	stalkie_big_nohaplotig	CDS	9377528	9377698	.	+	0	Parent=FBgn0261642.1.mrna1;Target=FBgn0261642.1 199 369 +
Chr2	stalkie_big_nohaplotig	CDS	9381787	9381969	.	+	0	Parent=FBgn0261642.1.mrna1;Target=FBgn0261642.1 370 552 +
Chr2	stalkie_big_nohaplotig	CDS	9398928	9398969	.	+	0	Parent=FBgn0261642.1.mrna1;Target=FBgn0261642.1 553 594 +
Chr2	stalkie_big_nohaplotig	CDS	9400814	9400940	.	+	0	Parent=FBgn0261642.1.mrna1;Target=FBgn0261642.1 595 721 +
Chr2	stalkie_big_nohaplotig	CDS	9426308	9426342	.	+	2	Parent=FBgn0261642.1.mrna1;Target=FBgn0261642.1 722 756 +
Chr2	gffcl	locus	9293591	9294887	.	+	.	ID=RLOC_00014626;geneIDs=comp157586_c0_seq1.path1;transcripts=comp157586_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9293591	9294887	.	+	.	ID=comp157586_c0_seq1.mrna1;geneID=comp157586_c0_seq1.path1;Name=comp157586_c0_seq1;Dir=antisensecoverage=98.6;identity=96.2;matches=1147;mismatches=44;indels=1;unknowns=0;Target=comp157586_c0_seq1 999 1145 .;locus=RLOC_00014626
Chr2	stalkie_big_nohaplotig	exon	9293591	9293952	99	+	.	Parent=comp157586_c0_seq1.mrna1;Target=comp157586_c0_seq1 853 1214 -
Chr2	stalkie_big_nohaplotig	exon	9294013	9294093	100	+	.	Parent=comp157586_c0_seq1.mrna1;Target=comp157586_c0_seq1 772 852 -
Chr2	stalkie_big_nohaplotig	exon	9294139	9294887	94	+	.	Parent=comp157586_c0_seq1.mrna1;Target=comp157586_c0_seq1 3 750 -
Chr2	stalkie_big_nohaplotig	CDS	9293660	9293806	.	+	0	Parent=comp157586_c0_seq1.mrna1
Chr2	gffcl	locus	9387290	9387885	.	-	.	ID=RLOC_00014627;geneIDs=comp58979_c0_seq1.path1;transcripts=comp58979_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9387290	9387885	.	-	.	ID=comp58979_c0_seq1.mrna1;geneID=comp58979_c0_seq1.path1;Name=comp58979_c0_seq1;Dir=sensecoverage=97.6;identity=100.0;matches=533;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014627
Chr2	stalkie_big_nohaplotig	exon	9387290	9387595	100	-	.	Parent=comp58979_c0_seq1.mrna1;Target=comp58979_c0_seq1 228 533 +
Chr2	stalkie_big_nohaplotig	exon	9387659	9387885	100	-	.	Parent=comp58979_c0_seq1.mrna1;Target=comp58979_c0_seq1 1 227 +
Chr2	stalkie_big_nohaplotig	CDS	9387428	9387595	.	-	0	Parent=comp58979_c0_seq1.mrna1;Target=comp58979_c0_seq1 228 395 +
Chr2	stalkie_big_nohaplotig	CDS	9387659	9387763	.	-	0	Parent=comp58979_c0_seq1.mrna1;Target=comp58979_c0_seq1 123 227 +
Chr2	gffcl	locus	9405130	9791323	.	-	.	ID=RLOC_00014628;geneIDs=comp157954_c0_seq1.path1;transcripts=comp157954_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9405130	9791323	.	-	.	ID=comp157954_c0_seq1.mrna1;geneID=comp157954_c0_seq1.path1;Name=comp157954_c0_seq1;Dir=indeterminatecoverage=75.1;identity=97.7;matches=608;mismatches=7;indels=7;unknowns=0;Target=comp157954_c0_seq1 350 3 .;locus=RLOC_00014628
Chr2	stalkie_big_nohaplotig	exon	9405130	9405135	100	-	.	Parent=comp157954_c0_seq1.mrna1;Target=comp157954_c0_seq1 615 610 .
Chr2	stalkie_big_nohaplotig	exon	9406667	9406670	100	-	.	Parent=comp157954_c0_seq1.mrna1;Target=comp157954_c0_seq1 609 606 .
Chr2	stalkie_big_nohaplotig	exon	9408974	9408983	100	-	.	Parent=comp157954_c0_seq1.mrna1;Target=comp157954_c0_seq1 605 596 .
Chr2	stalkie_big_nohaplotig	exon	9415669	9415673	100	-	.	Parent=comp157954_c0_seq1.mrna1;Target=comp157954_c0_seq1 595 591 .
Chr2	stalkie_big_nohaplotig	exon	9437554	9437555	100	-	.	Parent=comp157954_c0_seq1.mrna1;Target=comp157954_c0_seq1 590 589 .
Chr2	stalkie_big_nohaplotig	exon	9441231	9441237	100	-	.	Parent=comp157954_c0_seq1.mrna1;Target=comp157954_c0_seq1 588 582 .
Chr2	stalkie_big_nohaplotig	exon	9790736	9791323	97	-	.	Parent=comp157954_c0_seq1.mrna1;Target=comp157954_c0_seq1 581 1 .
Chr2	stalkie_big_nohaplotig	CDS	9790974	9791321	.	-	0	Parent=comp157954_c0_seq1.mrna1
Chr2	gffcl	locus	9429628	9430214	.	-	.	ID=RLOC_00014629;geneIDs=comp130020_c0_seq1.path1;transcripts=comp130020_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9429628	9430214	.	-	.	ID=comp130020_c0_seq1.mrna1;geneID=comp130020_c0_seq1.path1;Name=comp130020_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=570;mismatches=6;indels=12;unknowns=0;Target=comp130020_c0_seq1 577 1 .;CDS_Target=comp130020_c0_seq1 576 502 .;locus=RLOC_00014629
Chr2	stalkie_big_nohaplotig	exon	9429628	9430214	96	-	.	Parent=comp130020_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9429629	9429703	.	-	0	Parent=comp130020_c0_seq1.mrna1
Chr2	gffcl	locus	9430419	9431189	.	-	.	ID=RLOC_00014630;geneIDs=comp151523_c0_seq1.path1;transcripts=comp151523_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9430419	9431189	.	-	.	ID=comp151523_c0_seq1.mrna1;geneID=comp151523_c0_seq1.path1;Name=comp151523_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=765;mismatches=6;indels=0;unknowns=0;Target=comp151523_c0_seq1 771 1 .;CDS_Target=comp151523_c0_seq1 724 638 .;locus=RLOC_00014630
Chr2	stalkie_big_nohaplotig	exon	9430419	9431189	99	-	.	Parent=comp151523_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9430466	9430552	.	-	0	Parent=comp151523_c0_seq1.mrna1
Chr2	gffcl	locus	9433068	9433662	.	-	.	ID=RLOC_00014631;geneIDs=comp143027_c0_seq1.path1;transcripts=comp143027_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9433068	9433662	.	-	.	ID=comp143027_c0_seq1.mrna1;geneID=comp143027_c0_seq1.path1;Name=comp143027_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=594;mismatches=1;indels=0;unknowns=0;Target=comp143027_c0_seq1 595 1 .;CDS_Target=comp143027_c0_seq1 536 453 .;locus=RLOC_00014631
Chr2	stalkie_big_nohaplotig	exon	9433068	9433662	99	-	.	Parent=comp143027_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9433127	9433210	.	-	0	Parent=comp143027_c0_seq1.mrna1
Chr2	gffcl	locus	9433818	9435528	.	+	.	ID=RLOC_00014632;geneIDs=comp134804_c0_seq1.path1,comp152161_c0_seq1.path1;transcripts=comp152161_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9433818	9434919	.	+	.	ID=comp152161_c0_seq1.mrna1;geneID=comp152161_c0_seq1.path1;Name=comp152161_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=1085;mismatches=13;indels=7;unknowns=0;Target=comp152161_c0_seq1 1101 1 .;CDS_Target=comp152161_c0_seq1 353 291 .;locus=RLOC_00014632
Chr2	stalkie_big_nohaplotig	exon	9433818	9434919	98	+	.	Parent=comp152161_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9434107	9434169	.	+	0	Parent=comp152161_c0_seq1.mrna1
Chr2	gffcl	locus	9444321	9444941	.	-	.	ID=RLOC_00014633;geneIDs=comp53618_c0_seq1.path1;transcripts=comp53618_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9444321	9444941	.	-	.	ID=comp53618_c0_seq1.mrna1;geneID=comp53618_c0_seq1.path1;Name=comp53618_c0_seq1;Dir=sensecoverage=99.5;identity=100.0;matches=558;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014633
Chr2	stalkie_big_nohaplotig	exon	9444321	9444593	100	-	.	Parent=comp53618_c0_seq1.mrna1;Target=comp53618_c0_seq1 287 559 +
Chr2	stalkie_big_nohaplotig	exon	9444657	9444941	100	-	.	Parent=comp53618_c0_seq1.mrna1;Target=comp53618_c0_seq1 2 286 +
Chr2	stalkie_big_nohaplotig	CDS	9444506	9444593	.	-	1	Parent=comp53618_c0_seq1.mrna1;Target=comp53618_c0_seq1 287 374 +
Chr2	stalkie_big_nohaplotig	CDS	9444657	9444790	.	-	0	Parent=comp53618_c0_seq1.mrna1;Target=comp53618_c0_seq1 153 286 +
Chr2	gffcl	locus	9464854	9467243	.	-	.	ID=RLOC_00014634;geneIDs=FBgn0031566.2.path1;transcripts=FBgn0031566.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9464854	9467243	.	-	.	ID=FBgn0031566.2.mrna1;geneID=FBgn0031566.2.path1;Name=FBgn0031566.2;Dir=sensecoverage=100.0;identity=99.8;matches=2080;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014634
Chr2	stalkie_big_nohaplotig	exon	9464854	9464955	100	-	.	Parent=FBgn0031566.2.mrna1;Target=FBgn0031566.2 1984 2085 +
Chr2	stalkie_big_nohaplotig	exon	9465033	9465173	100	-	.	Parent=FBgn0031566.2.mrna1;Target=FBgn0031566.2 1843 1983 +
Chr2	stalkie_big_nohaplotig	exon	9465227	9465703	100	-	.	Parent=FBgn0031566.2.mrna1;Target=FBgn0031566.2 1366 1842 +
Chr2	stalkie_big_nohaplotig	exon	9465758	9466863	99	-	.	Parent=FBgn0031566.2.mrna1;Target=FBgn0031566.2 260 1365 +
Chr2	stalkie_big_nohaplotig	exon	9466985	9467243	100	-	.	Parent=FBgn0031566.2.mrna1;Target=FBgn0031566.2 1 259 +
Chr2	stalkie_big_nohaplotig	CDS	9464854	9464955	.	-	0	Parent=FBgn0031566.2.mrna1;Target=FBgn0031566.2 1984 2085 +
Chr2	stalkie_big_nohaplotig	CDS	9465033	9465173	.	-	0	Parent=FBgn0031566.2.mrna1;Target=FBgn0031566.2 1843 1983 +
Chr2	stalkie_big_nohaplotig	CDS	9465227	9465703	.	-	0	Parent=FBgn0031566.2.mrna1;Target=FBgn0031566.2 1366 1842 +
Chr2	stalkie_big_nohaplotig	CDS	9465758	9466863	.	-	2	Parent=FBgn0031566.2.mrna1;Target=FBgn0031566.2 260 1365 +
Chr2	stalkie_big_nohaplotig	CDS	9466985	9467243	.	-	0	Parent=FBgn0031566.2.mrna1;Target=FBgn0031566.2 1 259 +
Chr2	gffcl	locus	9496904	9497228	.	+	.	ID=RLOC_00014635;geneIDs=comp60478_c0_seq1.path1;transcripts=comp60478_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9496904	9497228	.	+	.	ID=comp60478_c0_seq1.mrna1;geneID=comp60478_c0_seq1.path1;Name=comp60478_c0_seq1;Dir=indeterminatecoverage=93.4;identity=99.1;matches=322;mismatches=3;indels=0;unknowns=0;Target=comp60478_c0_seq1 348 24 .;CDS_Target=comp60478_c0_seq1 172 26 .;locus=RLOC_00014635
Chr2	stalkie_big_nohaplotig	exon	9496904	9497228	99	+	.	Parent=comp60478_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9496906	9497052	.	+	0	Parent=comp60478_c0_seq1.mrna1
Chr2	gffcl	locus	9497955	9498940	.	+	.	ID=RLOC_00014636;geneIDs=comp157010_c0_seq1.path1;transcripts=comp157010_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9497955	9498940	.	+	.	ID=comp157010_c0_seq1.mrna1;geneID=comp157010_c0_seq1.path1;Name=comp157010_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=975;mismatches=11;indels=6;unknowns=0;Target=comp157010_c0_seq1 992 1 .;CDS_Target=comp157010_c0_seq1 721 407 .;locus=RLOC_00014636
Chr2	stalkie_big_nohaplotig	exon	9497955	9498940	98	+	.	Parent=comp157010_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9498355	9498669	.	+	0	Parent=comp157010_c0_seq1.mrna1
Chr2	gffcl	locus	9502321	9503319	.	+	.	ID=RLOC_00014637;geneIDs=FBgn0010226.1.path1;transcripts=FBgn0010226.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9502321	9503319	.	+	.	ID=FBgn0010226.1.mrna1;geneID=FBgn0010226.1.path1;Name=FBgn0010226.1;Dir=sensecoverage=100.0;identity=100.0;matches=729;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014637
Chr2	stalkie_big_nohaplotig	exon	9502321	9502573	100	+	.	Parent=FBgn0010226.1.mrna1;Target=FBgn0010226.1 1 253 +
Chr2	stalkie_big_nohaplotig	exon	9502673	9502840	100	+	.	Parent=FBgn0010226.1.mrna1;Target=FBgn0010226.1 254 421 +
Chr2	stalkie_big_nohaplotig	exon	9502908	9503050	100	+	.	Parent=FBgn0010226.1.mrna1;Target=FBgn0010226.1 422 564 +
Chr2	stalkie_big_nohaplotig	exon	9503155	9503319	100	+	.	Parent=FBgn0010226.1.mrna1;Target=FBgn0010226.1 565 729 +
Chr2	stalkie_big_nohaplotig	CDS	9502321	9502573	.	+	0	Parent=FBgn0010226.1.mrna1;Target=FBgn0010226.1 1 253 +
Chr2	stalkie_big_nohaplotig	CDS	9502673	9502840	.	+	2	Parent=FBgn0010226.1.mrna1;Target=FBgn0010226.1 254 421 +
Chr2	stalkie_big_nohaplotig	CDS	9502908	9503050	.	+	2	Parent=FBgn0010226.1.mrna1;Target=FBgn0010226.1 422 564 +
Chr2	stalkie_big_nohaplotig	CDS	9503155	9503319	.	+	0	Parent=FBgn0010226.1.mrna1;Target=FBgn0010226.1 565 729 +
Chr2	gffcl	locus	9505973	9507241	.	-	.	ID=RLOC_00014638;geneIDs=FBgn0034191.2.path1;transcripts=FBgn0034191.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9505973	9507241	.	-	.	ID=FBgn0034191.2.mrna1;geneID=FBgn0034191.2.path1;Name=FBgn0034191.2;Dir=sensecoverage=100.0;identity=99.3;matches=846;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014638
Chr2	stalkie_big_nohaplotig	exon	9505973	9506059	100	-	.	Parent=FBgn0034191.2.mrna1;Target=FBgn0034191.2 766 852 +
Chr2	stalkie_big_nohaplotig	exon	9506115	9506278	99	-	.	Parent=FBgn0034191.2.mrna1;Target=FBgn0034191.2 602 765 +
Chr2	stalkie_big_nohaplotig	exon	9506336	9506460	97	-	.	Parent=FBgn0034191.2.mrna1;Target=FBgn0034191.2 477 601 +
Chr2	stalkie_big_nohaplotig	exon	9506532	9506719	99	-	.	Parent=FBgn0034191.2.mrna1;Target=FBgn0034191.2 289 476 +
Chr2	stalkie_big_nohaplotig	exon	9506784	9507032	99	-	.	Parent=FBgn0034191.2.mrna1;Target=FBgn0034191.2 40 288 +
Chr2	stalkie_big_nohaplotig	exon	9507203	9507241	100	-	.	Parent=FBgn0034191.2.mrna1;Target=FBgn0034191.2 1 39 +
Chr2	stalkie_big_nohaplotig	CDS	9505973	9506059	.	-	0	Parent=FBgn0034191.2.mrna1;Target=FBgn0034191.2 766 852 +
Chr2	stalkie_big_nohaplotig	CDS	9506115	9506278	.	-	2	Parent=FBgn0034191.2.mrna1;Target=FBgn0034191.2 602 765 +
Chr2	stalkie_big_nohaplotig	CDS	9506336	9506460	.	-	1	Parent=FBgn0034191.2.mrna1;Target=FBgn0034191.2 477 601 +
Chr2	stalkie_big_nohaplotig	CDS	9506532	9506719	.	-	0	Parent=FBgn0034191.2.mrna1;Target=FBgn0034191.2 289 476 +
Chr2	stalkie_big_nohaplotig	CDS	9506784	9507032	.	-	0	Parent=FBgn0034191.2.mrna1;Target=FBgn0034191.2 40 288 +
Chr2	stalkie_big_nohaplotig	CDS	9507203	9507241	.	-	0	Parent=FBgn0034191.2.mrna1;Target=FBgn0034191.2 1 39 +
Chr2	gffcl	locus	9508137	9508802	.	+	.	ID=RLOC_00014639;geneIDs=comp144145_c0_seq1.path1;transcripts=comp144145_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9508137	9508802	.	+	.	ID=comp144145_c0_seq1.mrna1;geneID=comp144145_c0_seq1.path1;Name=comp144145_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.8;matches=394;mismatches=14;indels=12;unknowns=0;Target=comp144145_c0_seq1 441 361 .;locus=RLOC_00014639
Chr2	stalkie_big_nohaplotig	exon	9508137	9508285	86	+	.	Parent=comp144145_c0_seq1.mrna1;Target=comp144145_c0_seq1 161 1 .
Chr2	stalkie_big_nohaplotig	exon	9508544	9508802	98	+	.	Parent=comp144145_c0_seq1.mrna1;Target=comp144145_c0_seq1 501 243 .
Chr2	stalkie_big_nohaplotig	CDS	9508662	9508742	.	+	0	Parent=comp144145_c0_seq1.mrna1
Chr2	gffcl	locus	9509124	9510475	.	-	.	ID=RLOC_00014640;geneIDs=FBgn0034191.1.path1;transcripts=FBgn0034191.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9509124	9510475	.	-	.	ID=FBgn0034191.1.mrna1;geneID=FBgn0034191.1.path1;Name=FBgn0034191.1;Dir=sensecoverage=99.8;identity=99.4;matches=854;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014640
Chr2	stalkie_big_nohaplotig	exon	9509124	9509210	100	-	.	Parent=FBgn0034191.1.mrna1;Target=FBgn0034191.1 775 861 +
Chr2	stalkie_big_nohaplotig	exon	9509295	9509458	100	-	.	Parent=FBgn0034191.1.mrna1;Target=FBgn0034191.1 611 774 +
Chr2	stalkie_big_nohaplotig	exon	9509525	9509649	99	-	.	Parent=FBgn0034191.1.mrna1;Target=FBgn0034191.1 486 610 +
Chr2	stalkie_big_nohaplotig	exon	9509709	9509896	100	-	.	Parent=FBgn0034191.1.mrna1;Target=FBgn0034191.1 298 485 +
Chr2	stalkie_big_nohaplotig	exon	9509970	9510218	99	-	.	Parent=FBgn0034191.1.mrna1;Target=FBgn0034191.1 49 297 +
Chr2	stalkie_big_nohaplotig	exon	9510355	9510360	100	-	.	Parent=FBgn0034191.1.mrna1;Target=FBgn0034191.1 43 48 +
Chr2	stalkie_big_nohaplotig	exon	9510436	9510475	92	-	.	Parent=FBgn0034191.1.mrna1;Target=FBgn0034191.1 3 42 +
Chr2	stalkie_big_nohaplotig	CDS	9509124	9509210	.	-	0	Parent=FBgn0034191.1.mrna1;Target=FBgn0034191.1 775 861 +
Chr2	stalkie_big_nohaplotig	CDS	9509295	9509458	.	-	2	Parent=FBgn0034191.1.mrna1;Target=FBgn0034191.1 611 774 +
Chr2	stalkie_big_nohaplotig	CDS	9509525	9509649	.	-	1	Parent=FBgn0034191.1.mrna1;Target=FBgn0034191.1 486 610 +
Chr2	stalkie_big_nohaplotig	CDS	9509709	9509896	.	-	0	Parent=FBgn0034191.1.mrna1;Target=FBgn0034191.1 298 485 +
Chr2	stalkie_big_nohaplotig	CDS	9509970	9510218	.	-	0	Parent=FBgn0034191.1.mrna1;Target=FBgn0034191.1 49 297 +
Chr2	stalkie_big_nohaplotig	CDS	9510355	9510360	.	-	0	Parent=FBgn0034191.1.mrna1;Target=FBgn0034191.1 43 48 +
Chr2	stalkie_big_nohaplotig	CDS	9510436	9510474	.	-	0	Parent=FBgn0034191.1.mrna1;Target=FBgn0034191.1 4 42 +
Chr2	gffcl	locus	9511442	9518092	.	+	.	ID=RLOC_00014641;geneIDs=FBgn0010591.1.path1;transcripts=FBgn0010591.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9511442	9518092	.	+	.	ID=FBgn0010591.1.mrna1;geneID=FBgn0010591.1.path1;Name=FBgn0010591.1;Dir=sensecoverage=100.0;identity=99.2;matches=1637;mismatches=13;indels=0;unknowns=0;locus=RLOC_00014641
Chr2	stalkie_big_nohaplotig	exon	9511442	9511610	98	+	.	Parent=FBgn0010591.1.mrna1;Target=FBgn0010591.1 1 169 +
Chr2	stalkie_big_nohaplotig	exon	9515843	9516267	98	+	.	Parent=FBgn0010591.1.mrna1;Target=FBgn0010591.1 170 594 +
Chr2	stalkie_big_nohaplotig	exon	9516331	9516567	99	+	.	Parent=FBgn0010591.1.mrna1;Target=FBgn0010591.1 595 831 +
Chr2	stalkie_big_nohaplotig	exon	9516633	9516842	99	+	.	Parent=FBgn0010591.1.mrna1;Target=FBgn0010591.1 832 1041 +
Chr2	stalkie_big_nohaplotig	exon	9516896	9517134	100	+	.	Parent=FBgn0010591.1.mrna1;Target=FBgn0010591.1 1042 1280 +
Chr2	stalkie_big_nohaplotig	exon	9517652	9517798	97	+	.	Parent=FBgn0010591.1.mrna1;Target=FBgn0010591.1 1281 1427 +
Chr2	stalkie_big_nohaplotig	exon	9517870	9518092	100	+	.	Parent=FBgn0010591.1.mrna1;Target=FBgn0010591.1 1428 1650 +
Chr2	stalkie_big_nohaplotig	CDS	9511442	9511610	.	+	0	Parent=FBgn0010591.1.mrna1;Target=FBgn0010591.1 1 169 +
Chr2	stalkie_big_nohaplotig	CDS	9515843	9516267	.	+	2	Parent=FBgn0010591.1.mrna1;Target=FBgn0010591.1 170 594 +
Chr2	stalkie_big_nohaplotig	CDS	9516331	9516567	.	+	0	Parent=FBgn0010591.1.mrna1;Target=FBgn0010591.1 595 831 +
Chr2	stalkie_big_nohaplotig	CDS	9516633	9516842	.	+	0	Parent=FBgn0010591.1.mrna1;Target=FBgn0010591.1 832 1041 +
Chr2	stalkie_big_nohaplotig	CDS	9516896	9517134	.	+	0	Parent=FBgn0010591.1.mrna1;Target=FBgn0010591.1 1042 1280 +
Chr2	stalkie_big_nohaplotig	CDS	9517652	9517798	.	+	1	Parent=FBgn0010591.1.mrna1;Target=FBgn0010591.1 1281 1427 +
Chr2	stalkie_big_nohaplotig	CDS	9517870	9518092	.	+	1	Parent=FBgn0010591.1.mrna1;Target=FBgn0010591.1 1428 1650 +
Chr2	gffcl	locus	9526717	9775009	.	.	.	ID=RLOC_00014642;geneIDs=comp147422_c0_seq1.path1,comp148172_c1_seq1.path1,comp149873_c1_seq1.path2,comp150425_c1_seq1.path1;transcripts=comp147422_c0_seq1.mrna1,comp150425_c1_seq1.mrna1,comp149873_c1_seq1.mrna2,comp148172_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9526717	9775009	.	-	.	ID=comp147422_c0_seq1.mrna1;geneID=comp147422_c0_seq1.path1;Name=comp147422_c0_seq1;Dir=sensecoverage=75.4;identity=86.1;matches=927;mismatches=58;indels=92;unknowns=0;locus=RLOC_00014642
Chr2	stalkie_big_nohaplotig	exon	9526717	9527148	93	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 1045 1485 +
Chr2	stalkie_big_nohaplotig	exon	9527264	9527468	96	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 840 1044 +
Chr2	stalkie_big_nohaplotig	exon	9542127	9542138	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 828 839 +
Chr2	stalkie_big_nohaplotig	exon	9549917	9549920	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 824 827 +
Chr2	stalkie_big_nohaplotig	exon	9571088	9571094	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 817 823 +
Chr2	stalkie_big_nohaplotig	exon	9572050	9572059	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 807 816 +
Chr2	stalkie_big_nohaplotig	exon	9577025	9577051	62	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 782 806 +
Chr2	stalkie_big_nohaplotig	exon	9577818	9577851	67	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 727 766 +
Chr2	stalkie_big_nohaplotig	exon	9584502	9584510	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 718 726 +
Chr2	stalkie_big_nohaplotig	exon	9591168	9591170	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 715 717 +
Chr2	stalkie_big_nohaplotig	exon	9606284	9606289	66	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 709 714 +
Chr2	stalkie_big_nohaplotig	exon	9610646	9610658	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 696 708 +
Chr2	stalkie_big_nohaplotig	exon	9619352	9619358	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 689 695 +
Chr2	stalkie_big_nohaplotig	exon	9627371	9627373	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 686 688 +
Chr2	stalkie_big_nohaplotig	exon	9629439	9629447	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 677 685 +
Chr2	stalkie_big_nohaplotig	exon	9636757	9636760	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 673 676 +
Chr2	stalkie_big_nohaplotig	exon	9637611	9637614	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 669 672 +
Chr2	stalkie_big_nohaplotig	exon	9641905	9641907	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 666 668 +
Chr2	stalkie_big_nohaplotig	exon	9647580	9647588	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 657 665 +
Chr2	stalkie_big_nohaplotig	exon	9655475	9655481	85	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 650 656 +
Chr2	stalkie_big_nohaplotig	exon	9657981	9657982	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 648 649 +
Chr2	stalkie_big_nohaplotig	exon	9671909	9671910	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 646 647 +
Chr2	stalkie_big_nohaplotig	exon	9672768	9672775	87	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 638 645 +
Chr2	stalkie_big_nohaplotig	exon	9674324	9674333	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 628 637 +
Chr2	stalkie_big_nohaplotig	exon	9677152	9677156	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 623 627 +
Chr2	stalkie_big_nohaplotig	exon	9682779	9682780	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 621 622 +
Chr2	stalkie_big_nohaplotig	exon	9688405	9688407	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 618 620 +
Chr2	stalkie_big_nohaplotig	exon	9695055	9695056	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 616 617 +
Chr2	stalkie_big_nohaplotig	exon	9701196	9701199	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 612 615 +
Chr2	stalkie_big_nohaplotig	exon	9704379	9704387	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 603 611 +
Chr2	stalkie_big_nohaplotig	exon	9711231	9711239	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 594 602 +
Chr2	stalkie_big_nohaplotig	exon	9711856	9711857	66	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 577 579 +
Chr2	stalkie_big_nohaplotig	exon	9712261	9712267	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 570 576 +
Chr2	stalkie_big_nohaplotig	exon	9719197	9719198	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 568 569 +
Chr2	stalkie_big_nohaplotig	exon	9726248	9726252	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 563 567 +
Chr2	stalkie_big_nohaplotig	exon	9733476	9733495	37	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 518 562 +
Chr2	stalkie_big_nohaplotig	exon	9741083	9741091	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 501 509 +
Chr2	stalkie_big_nohaplotig	exon	9747416	9747442	29	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 415 486 +
Chr2	stalkie_big_nohaplotig	exon	9750962	9750969	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 407 414 +
Chr2	stalkie_big_nohaplotig	exon	9751260	9751265	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 401 406 +
Chr2	stalkie_big_nohaplotig	exon	9756232	9756235	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 397 400 +
Chr2	stalkie_big_nohaplotig	exon	9764937	9764944	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 389 396 +
Chr2	stalkie_big_nohaplotig	exon	9770970	9770979	70	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 379 388 +
Chr2	stalkie_big_nohaplotig	exon	9774153	9774164	91	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 367 378 +
Chr2	stalkie_big_nohaplotig	exon	9775005	9775009	100	-	.	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 362 366 +
Chr2	stalkie_big_nohaplotig	CDS	9527109	9527148	.	-	1	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 1045 1084 +
Chr2	stalkie_big_nohaplotig	CDS	9527264	9527415	.	-	0	Parent=comp147422_c0_seq1.mrna1;Target=comp147422_c0_seq1 893 1044 +
Chr2	stalkie_big_nohaplotig	mRNA	9570619	9571216	.	-	.	ID=comp150425_c1_seq1.mrna1;geneID=comp150425_c1_seq1.path1;Name=comp150425_c1_seq1;Dir=indeterminatecoverage=98.8;identity=98.3;matches=590;mismatches=8;indels=2;unknowns=0;Target=comp150425_c1_seq1 607 8 .;CDS_Target=comp150425_c1_seq1 100 8 .;locus=RLOC_00014642
Chr2	stalkie_big_nohaplotig	exon	9570619	9571216	98	-	.	Parent=comp150425_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9571124	9571216	.	-	0	Parent=comp150425_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9627009	9627665	.	-	.	ID=comp149873_c1_seq1.mrna2;geneID=comp149873_c1_seq1.path2;Name=comp149873_c1_seq1;Dir=indeterminatecoverage=97.9;identity=99.1;matches=654;mismatches=3;indels=3;unknowns=0;Target=comp149873_c1_seq1 674 15 .;CDS_Target=comp149873_c1_seq1 291 229 .;locus=RLOC_00014642
Chr2	stalkie_big_nohaplotig	exon	9627009	9627665	99	-	.	Parent=comp149873_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	9627390	9627452	.	-	0	Parent=comp149873_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	9711572	9712834	.	+	.	ID=comp148172_c1_seq1.mrna1;geneID=comp148172_c1_seq1.path1;Name=comp148172_c1_seq1;Dir=indeterminatecoverage=99.9;identity=99.7;matches=1259;mismatches=3;indels=1;unknowns=0;Target=comp148172_c1_seq1 1263 2 .;CDS_Target=comp148172_c1_seq1 170 3 .;locus=RLOC_00014642
Chr2	stalkie_big_nohaplotig	exon	9711572	9712834	99	+	.	Parent=comp148172_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9711573	9711740	.	+	0	Parent=comp148172_c1_seq1.mrna1
Chr2	gffcl	locus	9578329	9580949	.	+	.	ID=RLOC_00014643;geneIDs=comp1437978_c0_seq1.path1;transcripts=comp1437978_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9578329	9580949	.	+	.	ID=comp1437978_c0_seq1.mrna1;geneID=comp1437978_c0_seq1.path1;Name=comp1437978_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=647;mismatches=1;indels=0;unknowns=0;Target=comp1437978_c0_seq1 2 103 +;locus=RLOC_00014643
Chr2	stalkie_big_nohaplotig	exon	9578329	9578942	99	+	.	Parent=comp1437978_c0_seq1.mrna1;Target=comp1437978_c0_seq1 1 614 +
Chr2	stalkie_big_nohaplotig	exon	9580916	9580949	100	+	.	Parent=comp1437978_c0_seq1.mrna1;Target=comp1437978_c0_seq1 615 648 +
Chr2	stalkie_big_nohaplotig	CDS	9578330	9578431	.	+	0	Parent=comp1437978_c0_seq1.mrna1
Chr2	gffcl	locus	9582516	9582835	.	+	.	ID=RLOC_00014644;geneIDs=comp174029_c0_seq1.path1;transcripts=comp174029_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9582516	9582835	.	+	.	ID=comp174029_c0_seq1.mrna1;geneID=comp174029_c0_seq1.path1;Name=comp174029_c0_seq1;Dir=indeterminatecoverage=72.9;identity=97.2;matches=311;mismatches=9;indels=0;unknowns=0;Target=comp174029_c0_seq1 438 119 .;CDS_Target=comp174029_c0_seq1 312 265 .;locus=RLOC_00014644
Chr2	stalkie_big_nohaplotig	exon	9582516	9582835	97	+	.	Parent=comp174029_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9582662	9582709	.	+	0	Parent=comp174029_c0_seq1.mrna1
Chr2	gffcl	locus	9601448	9601996	.	+	.	ID=RLOC_00014645;geneIDs=comp154952_c0_seq1.path2;transcripts=comp154952_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	9601448	9601996	.	+	.	ID=comp154952_c0_seq1.mrna2;geneID=comp154952_c0_seq1.path2;Name=comp154952_c0_seq1;Dir=indeterminatecoverage=92.7;identity=99.5;matches=546;mismatches=3;indels=0;unknowns=0;Target=comp154952_c0_seq1 567 19 .;CDS_Target=comp154952_c0_seq1 497 390 .;locus=RLOC_00014645
Chr2	stalkie_big_nohaplotig	exon	9601448	9601996	99	+	.	Parent=comp154952_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	9601819	9601926	.	+	0	Parent=comp154952_c0_seq1.mrna2
Chr2	gffcl	locus	9655762	9656428	.	+	.	ID=RLOC_00014646;geneIDs=comp149873_c1_seq1.path1;transcripts=comp149873_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9655762	9656428	.	+	.	ID=comp149873_c1_seq1.mrna1;geneID=comp149873_c1_seq1.path1;Name=comp149873_c1_seq1;Dir=indeterminatecoverage=99.6;identity=98.8;matches=663;mismatches=4;indels=4;unknowns=0;Target=comp149873_c1_seq1 674 4 .;CDS_Target=comp149873_c1_seq1 291 229 .;locus=RLOC_00014646
Chr2	stalkie_big_nohaplotig	exon	9655762	9656428	98	+	.	Parent=comp149873_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9655986	9656048	.	+	0	Parent=comp149873_c1_seq1.mrna1
Chr2	gffcl	locus	9682856	9683465	.	+	.	ID=RLOC_00014647;geneIDs=comp130940_c0_seq1.path1;transcripts=comp130940_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9682856	9683465	.	+	.	ID=comp130940_c0_seq1.mrna1;geneID=comp130940_c0_seq1.path1;Name=comp130940_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=596;mismatches=10;indels=4;unknowns=0;Target=comp130940_c0_seq1 606 1 .;CDS_Target=comp130940_c0_seq1 606 523 .;locus=RLOC_00014647
Chr2	stalkie_big_nohaplotig	exon	9682856	9683465	97	+	.	Parent=comp130940_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9683382	9683465	.	+	0	Parent=comp130940_c0_seq1.mrna1
Chr2	gffcl	locus	9697286	9698348	.	-	.	ID=RLOC_00014648;geneIDs=ORF3147.path1;transcripts=ORF3147.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9697286	9698348	.	-	.	ID=ORF3147.mrna1;geneID=ORF3147.path1;Name=ORF3147;Dir=sensecoverage=100.0;identity=98.7;matches=752;mismatches=9;indels=1;unknowns=0;locus=RLOC_00014648
Chr2	stalkie_big_nohaplotig	exon	9697286	9697480	100	-	.	Parent=ORF3147.mrna1;Target=ORF3147 568 762 +
Chr2	stalkie_big_nohaplotig	exon	9697544	9697665	99	-	.	Parent=ORF3147.mrna1;Target=ORF3147 446 567 +
Chr2	stalkie_big_nohaplotig	exon	9697725	9697956	97	-	.	Parent=ORF3147.mrna1;Target=ORF3147 214 445 +
Chr2	stalkie_big_nohaplotig	exon	9698022	9698196	98	-	.	Parent=ORF3147.mrna1;Target=ORF3147 39 213 +
Chr2	stalkie_big_nohaplotig	exon	9698312	9698348	97	-	.	Parent=ORF3147.mrna1;Target=ORF3147 1 38 +
Chr2	stalkie_big_nohaplotig	CDS	9698188	9698196	.	-	1	Parent=ORF3147.mrna1;Target=ORF3147 39 47 +
Chr2	stalkie_big_nohaplotig	CDS	9698312	9698346	.	-	0	Parent=ORF3147.mrna1;Target=ORF3147 3 38 +
Chr2	gffcl	locus	9708942	9710339	.	-	.	ID=RLOC_00014649;geneIDs=ORF763.path1,ORF763.path2;transcripts=ORF763.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9709775	9710339	.	-	.	ID=ORF763.mrna1;geneID=ORF763.path1;Name=ORF763;Dir=sensecoverage=35.3;identity=98.8;matches=505;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014649
Chr2	stalkie_big_nohaplotig	exon	9709775	9710139	98	-	.	Parent=ORF763.mrna1;Target=ORF763 147 511 +
Chr2	stalkie_big_nohaplotig	exon	9710194	9710339	98	-	.	Parent=ORF763.mrna1;Target=ORF763 1 146 +
Chr2	stalkie_big_nohaplotig	CDS	9709775	9710139	.	-	1	Parent=ORF763.mrna1;Target=ORF763 147 511 +
Chr2	stalkie_big_nohaplotig	CDS	9710194	9710339	.	-	0	Parent=ORF763.mrna1;Target=ORF763 1 146 +
Chr2	gffcl	locus	9753108	9753556	.	+	.	ID=RLOC_00014651;geneIDs=comp135850_c0_seq1.path1;transcripts=comp135850_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9753108	9753556	.	+	.	ID=comp135850_c0_seq1.mrna1;geneID=comp135850_c0_seq1.path1;Name=comp135850_c0_seq1;Dir=indeterminatecoverage=91.3;identity=98.9;matches=444;mismatches=5;indels=0;unknowns=0;Target=comp135850_c0_seq1 492 44 .;CDS_Target=comp135850_c0_seq1 289 275 .;locus=RLOC_00014651
Chr2	stalkie_big_nohaplotig	exon	9753108	9753556	98	+	.	Parent=comp135850_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9753339	9753353	.	+	0	Parent=comp135850_c0_seq1.mrna1
Chr2	gffcl	locus	9768472	9769421	.	-	.	ID=RLOC_00014652;geneIDs=ORF2600.path1;transcripts=ORF2600.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9768472	9769421	.	-	.	ID=ORF2600.mrna1;geneID=ORF2600.path1;Name=ORF2600;Dir=sensecoverage=100.0;identity=100.0;matches=834;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014652
Chr2	stalkie_big_nohaplotig	exon	9768472	9768929	100	-	.	Parent=ORF2600.mrna1;Target=ORF2600 377 834 +
Chr2	stalkie_big_nohaplotig	exon	9768989	9769155	100	-	.	Parent=ORF2600.mrna1;Target=ORF2600 210 376 +
Chr2	stalkie_big_nohaplotig	exon	9769213	9769421	100	-	.	Parent=ORF2600.mrna1;Target=ORF2600 1 209 +
Chr2	stalkie_big_nohaplotig	CDS	9768472	9768929	.	-	2	Parent=ORF2600.mrna1;Target=ORF2600 377 834 +
Chr2	stalkie_big_nohaplotig	CDS	9768989	9769155	.	-	1	Parent=ORF2600.mrna1;Target=ORF2600 210 376 +
Chr2	stalkie_big_nohaplotig	CDS	9769213	9769421	.	-	0	Parent=ORF2600.mrna1;Target=ORF2600 1 209 +
Chr2	gffcl	locus	9782118	9782817	.	-	.	ID=RLOC_00014653;geneIDs=comp151696_c0_seq1.path1;transcripts=comp151696_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9782118	9782817	.	-	.	ID=comp151696_c0_seq1.mrna1;geneID=comp151696_c0_seq1.path1;Name=comp151696_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.6;matches=687;mismatches=13;indels=11;unknowns=0;Target=comp151696_c0_seq1 711 1 .;CDS_Target=comp151696_c0_seq1 663 601 .;locus=RLOC_00014653
Chr2	stalkie_big_nohaplotig	exon	9782118	9782817	96	-	.	Parent=comp151696_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9782155	9782217	.	-	0	Parent=comp151696_c0_seq1.mrna1
Chr2	gffcl	locus	9782824	9784019	.	-	.	ID=RLOC_00014654;geneIDs=comp148945_c0_seq1.path1;transcripts=comp148945_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9782824	9784019	.	-	.	ID=comp148945_c0_seq1.mrna1;geneID=comp148945_c0_seq1.path1;Name=comp148945_c0_seq1;Dir=indeterminatecoverage=99.5;identity=95.6;matches=1089;mismatches=27;indels=23;unknowns=0;Target=comp148945_c0_seq1 393 256 .;locus=RLOC_00014654
Chr2	stalkie_big_nohaplotig	exon	9782824	9783127	90	-	.	Parent=comp148945_c0_seq1.mrna1;Target=comp148945_c0_seq1 1158 876 .
Chr2	stalkie_big_nohaplotig	exon	9783187	9784019	97	-	.	Parent=comp148945_c0_seq1.mrna1;Target=comp148945_c0_seq1 835 1 .
Chr2	stalkie_big_nohaplotig	CDS	9783628	9783765	.	-	0	Parent=comp148945_c0_seq1.mrna1
Chr2	gffcl	locus	9786752	9786834	.	+	.	ID=RLOC_00014655;geneIDs=comp144458_c0_seq1.path2;transcripts=comp144458_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	9786752	9786834	.	+	.	ID=comp144458_c0_seq1.mrna2;geneID=comp144458_c0_seq1.path2;Name=comp144458_c0_seq1;Dir=indeterminatecoverage=27.6;identity=95.2;matches=79;mismatches=4;indels=0;unknowns=0;Target=comp144458_c0_seq1 301 219 .;locus=RLOC_00014655
Chr2	stalkie_big_nohaplotig	exon	9786752	9786834	95	+	.	Parent=comp144458_c0_seq1.mrna2
Chr2	gffcl	locus	9803525	9804862	.	-	.	ID=RLOC_00014656;geneIDs=FBgn0034197.1.path1;transcripts=FBgn0034197.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9803525	9804862	.	-	.	ID=FBgn0034197.1.mrna1;geneID=FBgn0034197.1.path1;Name=FBgn0034197.1;Dir=sensecoverage=100.0;identity=99.2;matches=1196;mismatches=10;indels=0;unknowns=0;locus=RLOC_00014656
Chr2	stalkie_big_nohaplotig	exon	9803525	9803768	100	-	.	Parent=FBgn0034197.1.mrna1;Target=FBgn0034197.1 963 1206 +
Chr2	stalkie_big_nohaplotig	exon	9803836	9804560	99	-	.	Parent=FBgn0034197.1.mrna1;Target=FBgn0034197.1 238 962 +
Chr2	stalkie_big_nohaplotig	exon	9804626	9804862	98	-	.	Parent=FBgn0034197.1.mrna1;Target=FBgn0034197.1 1 237 +
Chr2	stalkie_big_nohaplotig	CDS	9803525	9803768	.	-	1	Parent=FBgn0034197.1.mrna1;Target=FBgn0034197.1 963 1206 +
Chr2	stalkie_big_nohaplotig	CDS	9803836	9804560	.	-	0	Parent=FBgn0034197.1.mrna1;Target=FBgn0034197.1 238 962 +
Chr2	stalkie_big_nohaplotig	CDS	9804626	9804862	.	-	0	Parent=FBgn0034197.1.mrna1;Target=FBgn0034197.1 1 237 +
Chr2	gffcl	locus	9825525	9825841	.	+	.	ID=RLOC_00014657;geneIDs=comp67010_c0_seq1.path1;transcripts=comp67010_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9825525	9825841	.	+	.	ID=comp67010_c0_seq1.mrna1;geneID=comp67010_c0_seq1.path1;Name=comp67010_c0_seq1;Dir=indeterminatecoverage=94.1;identity=100.0;matches=317;mismatches=0;indels=0;unknowns=0;Target=comp67010_c0_seq1 336 20 .;CDS_Target=comp67010_c0_seq1 143 21 .;locus=RLOC_00014657
Chr2	stalkie_big_nohaplotig	exon	9825525	9825841	100	+	.	Parent=comp67010_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9825526	9825648	.	+	0	Parent=comp67010_c0_seq1.mrna1
Chr2	gffcl	locus	9832767	9833247	.	-	.	ID=RLOC_00014658;geneIDs=comp133880_c0_seq1.path1;transcripts=comp133880_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9832767	9833247	.	-	.	ID=comp133880_c0_seq1.mrna1;geneID=comp133880_c0_seq1.path1;Name=comp133880_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=476;mismatches=5;indels=0;unknowns=0;Target=comp133880_c0_seq1 481 1 .;CDS_Target=comp133880_c0_seq1 154 2 .;locus=RLOC_00014658
Chr2	stalkie_big_nohaplotig	exon	9832767	9833247	98	-	.	Parent=comp133880_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9833094	9833246	.	-	0	Parent=comp133880_c0_seq1.mrna1
Chr2	gffcl	locus	9948379	9949842	.	+	.	ID=RLOC_00014661;geneIDs=comp97024_c0_seq1.path1;transcripts=comp97024_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9948379	9949842	.	+	.	ID=comp97024_c0_seq1.mrna1;geneID=comp97024_c0_seq1.path1;Name=comp97024_c0_seq1;Dir=indeterminatecoverage=97.0;identity=98.8;matches=1447;mismatches=17;indels=0;unknowns=0;Target=comp97024_c0_seq1 1509 46 .;CDS_Target=comp97024_c0_seq1 1046 888 .;locus=RLOC_00014661
Chr2	stalkie_big_nohaplotig	exon	9948379	9949842	98	+	.	Parent=comp97024_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	9949221	9949379	.	+	0	Parent=comp97024_c0_seq1.mrna1
Chr2	gffcl	locus	9985714	9991542	.	+	.	ID=RLOC_00014662;geneIDs=FBgn0033614.1.path1;transcripts=FBgn0033614.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9985714	9991542	.	+	.	ID=FBgn0033614.1.mrna1;geneID=FBgn0033614.1.path1;Name=FBgn0033614.1;Dir=sensecoverage=100.0;identity=99.6;matches=798;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014662
Chr2	stalkie_big_nohaplotig	exon	9985714	9985866	98	+	.	Parent=FBgn0033614.1.mrna1;Target=FBgn0033614.1 1 153 +
Chr2	stalkie_big_nohaplotig	exon	9986861	9986989	100	+	.	Parent=FBgn0033614.1.mrna1;Target=FBgn0033614.1 154 282 +
Chr2	stalkie_big_nohaplotig	exon	9989794	9989841	100	+	.	Parent=FBgn0033614.1.mrna1;Target=FBgn0033614.1 283 330 +
Chr2	stalkie_big_nohaplotig	exon	9991005	9991121	99	+	.	Parent=FBgn0033614.1.mrna1;Target=FBgn0033614.1 331 447 +
Chr2	stalkie_big_nohaplotig	exon	9991189	9991542	100	+	.	Parent=FBgn0033614.1.mrna1;Target=FBgn0033614.1 448 801 +
Chr2	stalkie_big_nohaplotig	CDS	9985822	9985866	.	+	0	Parent=FBgn0033614.1.mrna1;Target=FBgn0033614.1 109 153 +
Chr2	stalkie_big_nohaplotig	CDS	9986861	9986989	.	+	0	Parent=FBgn0033614.1.mrna1;Target=FBgn0033614.1 154 282 +
Chr2	stalkie_big_nohaplotig	CDS	9989794	9989841	.	+	0	Parent=FBgn0033614.1.mrna1;Target=FBgn0033614.1 283 330 +
Chr2	stalkie_big_nohaplotig	CDS	9991005	9991121	.	+	0	Parent=FBgn0033614.1.mrna1;Target=FBgn0033614.1 331 447 +
Chr2	stalkie_big_nohaplotig	CDS	9991189	9991542	.	+	0	Parent=FBgn0033614.1.mrna1;Target=FBgn0033614.1 448 801 +
Chr2	gffcl	locus	9991629	10000666	.	-	.	ID=RLOC_00014663;geneIDs=FBgn0050275.1.path1,comp161962_c0_seq1.path1;transcripts=comp161962_c0_seq1.mrna1,FBgn0050275.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	9991629	10000666	.	-	.	ID=comp161962_c0_seq1.mrna1;geneID=comp161962_c0_seq1.path1;Name=comp161962_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=4029;mismatches=26;indels=0;unknowns=0;locus=RLOC_00014663
Chr2	stalkie_big_nohaplotig	exon	9991629	9991905	99	-	.	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 1 277 -
Chr2	stalkie_big_nohaplotig	exon	9992545	9992763	97	-	.	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 278 496 -
Chr2	stalkie_big_nohaplotig	exon	9992859	9993107	99	-	.	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 497 745 -
Chr2	stalkie_big_nohaplotig	exon	9993463	9993626	100	-	.	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 746 909 -
Chr2	stalkie_big_nohaplotig	exon	9993681	9994246	99	-	.	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 910 1475 -
Chr2	stalkie_big_nohaplotig	exon	9994826	9995400	99	-	.	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 1476 2050 -
Chr2	stalkie_big_nohaplotig	exon	9996660	9996849	99	-	.	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 2051 2240 -
Chr2	stalkie_big_nohaplotig	exon	9996905	9997203	98	-	.	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 2241 2539 -
Chr2	stalkie_big_nohaplotig	exon	9997274	9997566	100	-	.	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 2540 2832 -
Chr2	stalkie_big_nohaplotig	exon	9998164	9998279	100	-	.	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 2833 2948 -
Chr2	stalkie_big_nohaplotig	exon	9998343	9998456	100	-	.	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 2949 3062 -
Chr2	stalkie_big_nohaplotig	exon	9998521	9998666	100	-	.	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 3063 3208 -
Chr2	stalkie_big_nohaplotig	exon	9999620	9999755	99	-	.	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 3209 3344 -
Chr2	stalkie_big_nohaplotig	exon	9999814	9999955	100	-	.	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 3345 3486 -
Chr2	stalkie_big_nohaplotig	exon	10000019	10000194	100	-	.	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 3487 3662 -
Chr2	stalkie_big_nohaplotig	exon	10000274	10000666	98	-	.	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 3663 4055 -
Chr2	stalkie_big_nohaplotig	CDS	9995110	9995400	.	-	0	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 1760 2050 .
Chr2	stalkie_big_nohaplotig	CDS	9996660	9996849	.	-	1	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 2051 2240 .
Chr2	stalkie_big_nohaplotig	CDS	9996905	9997203	.	-	0	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 2241 2539 .
Chr2	stalkie_big_nohaplotig	CDS	9997274	9997566	.	-	2	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 2540 2832 .
Chr2	stalkie_big_nohaplotig	CDS	9998164	9998279	.	-	1	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 2833 2948 .
Chr2	stalkie_big_nohaplotig	CDS	9998343	9998456	.	-	1	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 2949 3062 .
Chr2	stalkie_big_nohaplotig	CDS	9998521	9998666	.	-	0	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 3063 3208 .
Chr2	stalkie_big_nohaplotig	CDS	9999620	9999755	.	-	1	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 3209 3344 .
Chr2	stalkie_big_nohaplotig	CDS	9999814	9999955	.	-	2	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 3345 3486 .
Chr2	stalkie_big_nohaplotig	CDS	10000019	10000194	.	-	1	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 3487 3662 .
Chr2	stalkie_big_nohaplotig	CDS	10000274	10000581	.	-	0	Parent=comp161962_c0_seq1.mrna1;Target=comp161962_c0_seq1 3663 3970 .
Chr2	stalkie_big_nohaplotig	mRNA	9991738	10000599	.	-	.	ID=FBgn0050275.1.mrna1;geneID=FBgn0050275.1.path1;Name=FBgn0050275.1;Dir=sensecoverage=100.0;identity=99.4;matches=3780;mismatches=24;indels=0;unknowns=0;locus=RLOC_00014663
Chr2	stalkie_big_nohaplotig	exon	9991738	9991905	99	-	.	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 3637 3804 +
Chr2	stalkie_big_nohaplotig	exon	9992545	9992763	97	-	.	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 3418 3636 +
Chr2	stalkie_big_nohaplotig	exon	9992859	9993107	99	-	.	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 3169 3417 +
Chr2	stalkie_big_nohaplotig	exon	9993463	9993626	100	-	.	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 3005 3168 +
Chr2	stalkie_big_nohaplotig	exon	9993681	9994246	99	-	.	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 2439 3004 +
Chr2	stalkie_big_nohaplotig	exon	9994826	9995038	99	-	.	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 2226 2438 +
Chr2	stalkie_big_nohaplotig	exon	9995114	9995400	98	-	.	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 1939 2225 +
Chr2	stalkie_big_nohaplotig	exon	9996660	9996849	99	-	.	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 1749 1938 +
Chr2	stalkie_big_nohaplotig	exon	9996905	9997203	98	-	.	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 1450 1748 +
Chr2	stalkie_big_nohaplotig	exon	9997274	9997566	100	-	.	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 1157 1449 +
Chr2	stalkie_big_nohaplotig	exon	9998164	9998279	100	-	.	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 1041 1156 +
Chr2	stalkie_big_nohaplotig	exon	9998343	9998456	100	-	.	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 927 1040 +
Chr2	stalkie_big_nohaplotig	exon	9998521	9998666	100	-	.	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 781 926 +
Chr2	stalkie_big_nohaplotig	exon	9999620	9999755	99	-	.	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 645 780 +
Chr2	stalkie_big_nohaplotig	exon	9999814	9999955	100	-	.	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 503 644 +
Chr2	stalkie_big_nohaplotig	exon	10000019	10000194	100	-	.	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 327 502 +
Chr2	stalkie_big_nohaplotig	exon	10000274	10000599	99	-	.	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 1 326 +
Chr2	stalkie_big_nohaplotig	CDS	9991738	9991905	.	-	0	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 3637 3804 +
Chr2	stalkie_big_nohaplotig	CDS	9992545	9992763	.	-	0	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 3418 3636 +
Chr2	stalkie_big_nohaplotig	CDS	9992859	9993107	.	-	0	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 3169 3417 +
Chr2	stalkie_big_nohaplotig	CDS	9993463	9993626	.	-	2	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 3005 3168 +
Chr2	stalkie_big_nohaplotig	CDS	9993681	9994246	.	-	1	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 2439 3004 +
Chr2	stalkie_big_nohaplotig	CDS	9994826	9995038	.	-	1	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 2226 2438 +
Chr2	stalkie_big_nohaplotig	CDS	9995114	9995400	.	-	0	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 1939 2225 +
Chr2	stalkie_big_nohaplotig	CDS	9996660	9996849	.	-	1	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 1749 1938 +
Chr2	stalkie_big_nohaplotig	CDS	9996905	9997203	.	-	0	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 1450 1748 +
Chr2	stalkie_big_nohaplotig	CDS	9997274	9997566	.	-	2	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 1157 1449 +
Chr2	stalkie_big_nohaplotig	CDS	9998164	9998279	.	-	1	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 1041 1156 +
Chr2	stalkie_big_nohaplotig	CDS	9998343	9998456	.	-	1	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 927 1040 +
Chr2	stalkie_big_nohaplotig	CDS	9998521	9998666	.	-	0	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 781 926 +
Chr2	stalkie_big_nohaplotig	CDS	9999620	9999755	.	-	1	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 645 780 +
Chr2	stalkie_big_nohaplotig	CDS	9999814	9999955	.	-	2	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 503 644 +
Chr2	stalkie_big_nohaplotig	CDS	10000019	10000194	.	-	1	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 327 502 +
Chr2	stalkie_big_nohaplotig	CDS	10000274	10000599	.	-	0	Parent=FBgn0050275.1.mrna1;Target=FBgn0050275.1 1 326 +
Chr2	gffcl	locus	10001910	10003018	.	-	.	ID=RLOC_00014664;geneIDs=FBgn0034770.1.path1;transcripts=FBgn0034770.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10001910	10003018	.	-	.	ID=FBgn0034770.1.mrna1;geneID=FBgn0034770.1.path1;Name=FBgn0034770.1;Dir=sensecoverage=100.0;identity=99.9;matches=764;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014664
Chr2	stalkie_big_nohaplotig	exon	10001910	10002130	100	-	.	Parent=FBgn0034770.1.mrna1;Target=FBgn0034770.1 545 765 +
Chr2	stalkie_big_nohaplotig	exon	10002197	10002353	99	-	.	Parent=FBgn0034770.1.mrna1;Target=FBgn0034770.1 388 544 +
Chr2	stalkie_big_nohaplotig	exon	10002511	10002639	100	-	.	Parent=FBgn0034770.1.mrna1;Target=FBgn0034770.1 259 387 +
Chr2	stalkie_big_nohaplotig	exon	10002706	10002852	100	-	.	Parent=FBgn0034770.1.mrna1;Target=FBgn0034770.1 112 258 +
Chr2	stalkie_big_nohaplotig	exon	10002908	10003018	100	-	.	Parent=FBgn0034770.1.mrna1;Target=FBgn0034770.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	10001910	10002130	.	-	2	Parent=FBgn0034770.1.mrna1;Target=FBgn0034770.1 545 765 +
Chr2	stalkie_big_nohaplotig	CDS	10002197	10002353	.	-	0	Parent=FBgn0034770.1.mrna1;Target=FBgn0034770.1 388 544 +
Chr2	stalkie_big_nohaplotig	CDS	10002511	10002639	.	-	0	Parent=FBgn0034770.1.mrna1;Target=FBgn0034770.1 259 387 +
Chr2	stalkie_big_nohaplotig	CDS	10002706	10002852	.	-	0	Parent=FBgn0034770.1.mrna1;Target=FBgn0034770.1 112 258 +
Chr2	stalkie_big_nohaplotig	CDS	10002908	10003018	.	-	0	Parent=FBgn0034770.1.mrna1;Target=FBgn0034770.1 1 111 +
Chr2	gffcl	locus	10005452	10006288	.	+	.	ID=RLOC_00014665;geneIDs=comp154327_c0_seq1.path1;transcripts=comp154327_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10005452	10006288	.	+	.	ID=comp154327_c0_seq1.mrna1;geneID=comp154327_c0_seq1.path1;Name=comp154327_c0_seq1;Dir=sensecoverage=99.6;identity=97.8;matches=753;mismatches=10;indels=7;unknowns=0;locus=RLOC_00014665
Chr2	stalkie_big_nohaplotig	exon	10005452	10005776	97	+	.	Parent=comp154327_c0_seq1.mrna1;Target=comp154327_c0_seq1 2 329 +
Chr2	stalkie_big_nohaplotig	exon	10005847	10006288	97	+	.	Parent=comp154327_c0_seq1.mrna1;Target=comp154327_c0_seq1 330 767 +
Chr2	stalkie_big_nohaplotig	CDS	10005713	10005776	.	+	0	Parent=comp154327_c0_seq1.mrna1;Target=comp154327_c0_seq1 266 329 +
Chr2	stalkie_big_nohaplotig	CDS	10005847	10006193	.	+	2	Parent=comp154327_c0_seq1.mrna1;Target=comp154327_c0_seq1 330 676 +
Chr2	gffcl	locus	10006808	10007596	.	-	.	ID=RLOC_00014666;geneIDs=FBgn0034769.2.path1;transcripts=FBgn0034769.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10006808	10007596	.	-	.	ID=FBgn0034769.2.mrna1;geneID=FBgn0034769.2.path1;Name=FBgn0034769.2;Dir=sensecoverage=100.0;identity=99.5;matches=645;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014666
Chr2	stalkie_big_nohaplotig	exon	10006808	10007013	99	-	.	Parent=FBgn0034769.2.mrna1;Target=FBgn0034769.2 443 648 +
Chr2	stalkie_big_nohaplotig	exon	10007087	10007438	99	-	.	Parent=FBgn0034769.2.mrna1;Target=FBgn0034769.2 91 442 +
Chr2	stalkie_big_nohaplotig	exon	10007507	10007596	98	-	.	Parent=FBgn0034769.2.mrna1;Target=FBgn0034769.2 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	10006808	10007013	.	-	2	Parent=FBgn0034769.2.mrna1;Target=FBgn0034769.2 443 648 +
Chr2	stalkie_big_nohaplotig	CDS	10007087	10007438	.	-	0	Parent=FBgn0034769.2.mrna1;Target=FBgn0034769.2 91 442 +
Chr2	stalkie_big_nohaplotig	CDS	10007507	10007596	.	-	0	Parent=FBgn0034769.2.mrna1;Target=FBgn0034769.2 1 90 +
Chr2	gffcl	locus	10008910	10012617	.	+	.	ID=RLOC_00014667;geneIDs=FBgn0016687.1.path1;transcripts=FBgn0016687.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10008910	10012617	.	+	.	ID=FBgn0016687.1.mrna1;geneID=FBgn0016687.1.path1;Name=FBgn0016687.1;Dir=sensecoverage=100.0;identity=99.8;matches=1174;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014667
Chr2	stalkie_big_nohaplotig	exon	10008910	10009279	99	+	.	Parent=FBgn0016687.1.mrna1;Target=FBgn0016687.1 1 370 +
Chr2	stalkie_big_nohaplotig	exon	10011034	10011152	100	+	.	Parent=FBgn0016687.1.mrna1;Target=FBgn0016687.1 371 489 +
Chr2	stalkie_big_nohaplotig	exon	10011239	10011634	100	+	.	Parent=FBgn0016687.1.mrna1;Target=FBgn0016687.1 490 885 +
Chr2	stalkie_big_nohaplotig	exon	10011952	10012103	100	+	.	Parent=FBgn0016687.1.mrna1;Target=FBgn0016687.1 886 1037 +
Chr2	stalkie_big_nohaplotig	exon	10012170	10012279	99	+	.	Parent=FBgn0016687.1.mrna1;Target=FBgn0016687.1 1038 1147 +
Chr2	stalkie_big_nohaplotig	exon	10012589	10012617	100	+	.	Parent=FBgn0016687.1.mrna1;Target=FBgn0016687.1 1148 1176 +
Chr2	stalkie_big_nohaplotig	CDS	10008910	10009279	.	+	0	Parent=FBgn0016687.1.mrna1;Target=FBgn0016687.1 1 370 +
Chr2	stalkie_big_nohaplotig	CDS	10011034	10011152	.	+	2	Parent=FBgn0016687.1.mrna1;Target=FBgn0016687.1 371 489 +
Chr2	stalkie_big_nohaplotig	CDS	10011239	10011634	.	+	0	Parent=FBgn0016687.1.mrna1;Target=FBgn0016687.1 490 885 +
Chr2	stalkie_big_nohaplotig	CDS	10011952	10012103	.	+	0	Parent=FBgn0016687.1.mrna1;Target=FBgn0016687.1 886 1037 +
Chr2	stalkie_big_nohaplotig	CDS	10012170	10012279	.	+	1	Parent=FBgn0016687.1.mrna1;Target=FBgn0016687.1 1038 1147 +
Chr2	stalkie_big_nohaplotig	CDS	10012589	10012617	.	+	2	Parent=FBgn0016687.1.mrna1;Target=FBgn0016687.1 1148 1176 +
Chr2	gffcl	locus	10014779	10020932	.	+	.	ID=RLOC_00014668;geneIDs=FBgn0033376.1.path1;transcripts=FBgn0033376.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10014779	10020932	.	+	.	ID=FBgn0033376.1.mrna1;geneID=FBgn0033376.1.path1;Name=FBgn0033376.1;Dir=sensecoverage=100.0;identity=99.6;matches=3740;mismatches=16;indels=0;unknowns=0;locus=RLOC_00014668
Chr2	stalkie_big_nohaplotig	exon	10014779	10014898	97	+	.	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 1 120 +
Chr2	stalkie_big_nohaplotig	exon	10014972	10015055	100	+	.	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 121 204 +
Chr2	stalkie_big_nohaplotig	exon	10015126	10015256	100	+	.	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 205 335 +
Chr2	stalkie_big_nohaplotig	exon	10015866	10016064	100	+	.	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 336 534 +
Chr2	stalkie_big_nohaplotig	exon	10016133	10016755	99	+	.	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 535 1157 +
Chr2	stalkie_big_nohaplotig	exon	10016883	10016960	97	+	.	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 1158 1235 +
Chr2	stalkie_big_nohaplotig	exon	10017053	10017359	100	+	.	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 1236 1542 +
Chr2	stalkie_big_nohaplotig	exon	10017424	10017537	99	+	.	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 1543 1656 +
Chr2	stalkie_big_nohaplotig	exon	10017600	10017782	100	+	.	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 1657 1839 +
Chr2	stalkie_big_nohaplotig	exon	10017847	10018031	99	+	.	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 1840 2024 +
Chr2	stalkie_big_nohaplotig	exon	10018101	10018283	99	+	.	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 2025 2207 +
Chr2	stalkie_big_nohaplotig	exon	10018650	10018855	100	+	.	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 2208 2413 +
Chr2	stalkie_big_nohaplotig	exon	10018916	10019098	100	+	.	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 2414 2596 +
Chr2	stalkie_big_nohaplotig	exon	10019483	10019699	100	+	.	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 2597 2813 +
Chr2	stalkie_big_nohaplotig	exon	10019765	10020193	99	+	.	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 2814 3242 +
Chr2	stalkie_big_nohaplotig	exon	10020254	10020428	100	+	.	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 3243 3417 +
Chr2	stalkie_big_nohaplotig	exon	10020501	10020688	99	+	.	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 3418 3605 +
Chr2	stalkie_big_nohaplotig	exon	10020782	10020932	100	+	.	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 3606 3756 +
Chr2	stalkie_big_nohaplotig	CDS	10014779	10014898	.	+	0	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 1 120 +
Chr2	stalkie_big_nohaplotig	CDS	10014972	10015055	.	+	0	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 121 204 +
Chr2	stalkie_big_nohaplotig	CDS	10015126	10015256	.	+	0	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 205 335 +
Chr2	stalkie_big_nohaplotig	CDS	10015866	10016064	.	+	1	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 336 534 +
Chr2	stalkie_big_nohaplotig	CDS	10016133	10016755	.	+	0	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 535 1157 +
Chr2	stalkie_big_nohaplotig	CDS	10016883	10016960	.	+	1	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 1158 1235 +
Chr2	stalkie_big_nohaplotig	CDS	10017053	10017359	.	+	1	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 1236 1542 +
Chr2	stalkie_big_nohaplotig	CDS	10017424	10017537	.	+	0	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 1543 1656 +
Chr2	stalkie_big_nohaplotig	CDS	10017600	10017782	.	+	0	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 1657 1839 +
Chr2	stalkie_big_nohaplotig	CDS	10017847	10018031	.	+	0	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 1840 2024 +
Chr2	stalkie_big_nohaplotig	CDS	10018101	10018283	.	+	1	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 2025 2207 +
Chr2	stalkie_big_nohaplotig	CDS	10018650	10018855	.	+	1	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 2208 2413 +
Chr2	stalkie_big_nohaplotig	CDS	10018916	10019098	.	+	2	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 2414 2596 +
Chr2	stalkie_big_nohaplotig	CDS	10019483	10019699	.	+	2	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 2597 2813 +
Chr2	stalkie_big_nohaplotig	CDS	10019765	10020193	.	+	1	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 2814 3242 +
Chr2	stalkie_big_nohaplotig	CDS	10020254	10020428	.	+	1	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 3243 3417 +
Chr2	stalkie_big_nohaplotig	CDS	10020501	10020688	.	+	0	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 3418 3605 +
Chr2	stalkie_big_nohaplotig	CDS	10020782	10020932	.	+	1	Parent=FBgn0033376.1.mrna1;Target=FBgn0033376.1 3606 3756 +
Chr2	gffcl	locus	10060783	10069328	.	-	.	ID=RLOC_00014669;geneIDs=FBgn0034662.1.path1;transcripts=FBgn0034662.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10060783	10069328	.	-	.	ID=FBgn0034662.1.mrna1;geneID=FBgn0034662.1.path1;Name=FBgn0034662.1;Dir=sensecoverage=100.0;identity=99.4;matches=7573;mismatches=43;indels=0;unknowns=0;locus=RLOC_00014669
Chr2	stalkie_big_nohaplotig	exon	10060783	10061112	99	-	.	Parent=FBgn0034662.1.mrna1;Target=FBgn0034662.1 7288 7617 +
Chr2	stalkie_big_nohaplotig	exon	10061173	10061282	100	-	.	Parent=FBgn0034662.1.mrna1;Target=FBgn0034662.1 7178 7287 +
Chr2	stalkie_big_nohaplotig	exon	10061349	10062474	99	-	.	Parent=FBgn0034662.1.mrna1;Target=FBgn0034662.1 6052 7177 +
Chr2	stalkie_big_nohaplotig	exon	10062600	10062715	100	-	.	Parent=FBgn0034662.1.mrna1;Target=FBgn0034662.1 5936 6051 +
Chr2	stalkie_big_nohaplotig	exon	10062870	10065395	99	-	.	Parent=FBgn0034662.1.mrna1;Target=FBgn0034662.1 3410 5935 +
Chr2	stalkie_big_nohaplotig	exon	10065560	10066828	99	-	.	Parent=FBgn0034662.1.mrna1;Target=FBgn0034662.1 2141 3409 +
Chr2	stalkie_big_nohaplotig	exon	10066915	10068067	99	-	.	Parent=FBgn0034662.1.mrna1;Target=FBgn0034662.1 988 2140 +
Chr2	stalkie_big_nohaplotig	exon	10068288	10068403	99	-	.	Parent=FBgn0034662.1.mrna1;Target=FBgn0034662.1 872 987 +
Chr2	stalkie_big_nohaplotig	exon	10068459	10069328	99	-	.	Parent=FBgn0034662.1.mrna1;Target=FBgn0034662.1 2 871 +
Chr2	stalkie_big_nohaplotig	CDS	10060783	10061112	.	-	0	Parent=FBgn0034662.1.mrna1;Target=FBgn0034662.1 7288 7617 +
Chr2	stalkie_big_nohaplotig	CDS	10061173	10061282	.	-	2	Parent=FBgn0034662.1.mrna1;Target=FBgn0034662.1 7178 7287 +
Chr2	stalkie_big_nohaplotig	CDS	10061349	10062474	.	-	0	Parent=FBgn0034662.1.mrna1;Target=FBgn0034662.1 6052 7177 +
Chr2	stalkie_big_nohaplotig	CDS	10062600	10062715	.	-	2	Parent=FBgn0034662.1.mrna1;Target=FBgn0034662.1 5936 6051 +
Chr2	stalkie_big_nohaplotig	CDS	10062870	10065395	.	-	2	Parent=FBgn0034662.1.mrna1;Target=FBgn0034662.1 3410 5935 +
Chr2	stalkie_big_nohaplotig	CDS	10065560	10066828	.	-	2	Parent=FBgn0034662.1.mrna1;Target=FBgn0034662.1 2141 3409 +
Chr2	stalkie_big_nohaplotig	CDS	10066915	10068067	.	-	0	Parent=FBgn0034662.1.mrna1;Target=FBgn0034662.1 988 2140 +
Chr2	stalkie_big_nohaplotig	CDS	10068288	10068403	.	-	2	Parent=FBgn0034662.1.mrna1;Target=FBgn0034662.1 872 987 +
Chr2	stalkie_big_nohaplotig	CDS	10068459	10069326	.	-	0	Parent=FBgn0034662.1.mrna1;Target=FBgn0034662.1 4 871 +
Chr2	gffcl	locus	10078615	10079592	.	-	.	ID=RLOC_00014670;geneIDs=comp142509_c0_seq1.path1;transcripts=comp142509_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10078615	10079592	.	-	.	ID=comp142509_c0_seq1.mrna1;geneID=comp142509_c0_seq1.path1;Name=comp142509_c0_seq1;Dir=indeterminatecoverage=97.8;identity=99.0;matches=968;mismatches=10;indels=0;unknowns=0;Target=comp142509_c0_seq1 978 1 .;CDS_Target=comp142509_c0_seq1 215 3 .;locus=RLOC_00014670
Chr2	stalkie_big_nohaplotig	exon	10078615	10079592	98	-	.	Parent=comp142509_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10079378	10079590	.	-	0	Parent=comp142509_c0_seq1.mrna1
Chr2	gffcl	locus	10079717	10081644	.	-	.	ID=RLOC_00014671;geneIDs=FBgn0054040.1.path1,comp137715_c0_seq1.path1,comp151659_c0_seq1.path1;transcripts=FBgn0054040.1.mrna1,comp151659_c0_seq1.mrna1,comp137715_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10079717	10081644	.	-	.	ID=FBgn0054040.1.mrna1;geneID=FBgn0054040.1.path1;Name=FBgn0054040.1;Dir=sensecoverage=93.6;identity=97.6;matches=767;mismatches=19;indels=0;unknowns=0;locus=RLOC_00014671
Chr2	stalkie_big_nohaplotig	exon	10079717	10080121	96	-	.	Parent=FBgn0054040.1.mrna1;Target=FBgn0054040.1 382 786 +
Chr2	stalkie_big_nohaplotig	exon	10081194	10081366	98	-	.	Parent=FBgn0054040.1.mrna1;Target=FBgn0054040.1 209 381 +
Chr2	stalkie_big_nohaplotig	exon	10081437	10081644	99	-	.	Parent=FBgn0054040.1.mrna1;Target=FBgn0054040.1 1 208 +
Chr2	stalkie_big_nohaplotig	CDS	10079717	10080121	.	-	0	Parent=FBgn0054040.1.mrna1;Target=FBgn0054040.1 382 786 +
Chr2	stalkie_big_nohaplotig	CDS	10081194	10081366	.	-	2	Parent=FBgn0054040.1.mrna1;Target=FBgn0054040.1 209 381 +
Chr2	stalkie_big_nohaplotig	CDS	10081437	10081644	.	-	0	Parent=FBgn0054040.1.mrna1;Target=FBgn0054040.1 1 208 +
Chr2	stalkie_big_nohaplotig	mRNA	10079717	10081644	.	-	.	ID=comp151659_c0_seq1.mrna1;geneID=comp151659_c0_seq1.path1;Name=comp151659_c0_seq1;Dir=sensecoverage=93.3;identity=97.6;matches=780;mismatches=19;indels=0;unknowns=0;Target=comp151659_c0_seq1 150 194 +;locus=RLOC_00014671
Chr2	stalkie_big_nohaplotig	exon	10079717	10080121	96	-	.	Parent=comp151659_c0_seq1.mrna1;Target=comp151659_c0_seq1 396 800 +
Chr2	stalkie_big_nohaplotig	exon	10081194	10081366	98	-	.	Parent=comp151659_c0_seq1.mrna1;Target=comp151659_c0_seq1 223 395 +
Chr2	stalkie_big_nohaplotig	exon	10081424	10081644	99	-	.	Parent=comp151659_c0_seq1.mrna1;Target=comp151659_c0_seq1 2 222 +
Chr2	stalkie_big_nohaplotig	CDS	10081452	10081496	.	-	0	Parent=comp151659_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10080519	10081216	.	-	.	ID=comp137715_c0_seq1.mrna1;geneID=comp137715_c0_seq1.path1;Name=comp137715_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.4;matches=673;mismatches=24;indels=1;unknowns=0;Target=comp137715_c0_seq1 697 1 .;CDS_Target=comp137715_c0_seq1 384 274 .;locus=RLOC_00014671
Chr2	stalkie_big_nohaplotig	exon	10080519	10081216	96	-	.	Parent=comp137715_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10080833	10080943	.	-	0	Parent=comp137715_c0_seq1.mrna1
Chr2	gffcl	locus	10083514	10084379	.	-	.	ID=RLOC_00014672;geneIDs=FBgn0034663.1.path1;transcripts=FBgn0034663.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10083514	10084379	.	-	.	ID=FBgn0034663.1.mrna1;geneID=FBgn0034663.1.path1;Name=FBgn0034663.1;Dir=sensecoverage=100.0;identity=98.5;matches=715;mismatches=11;indels=0;unknowns=0;locus=RLOC_00014672
Chr2	stalkie_big_nohaplotig	exon	10083514	10083798	98	-	.	Parent=FBgn0034663.1.mrna1;Target=FBgn0034663.1 442 726 +
Chr2	stalkie_big_nohaplotig	exon	10083869	10084023	97	-	.	Parent=FBgn0034663.1.mrna1;Target=FBgn0034663.1 287 441 +
Chr2	stalkie_big_nohaplotig	exon	10084094	10084379	98	-	.	Parent=FBgn0034663.1.mrna1;Target=FBgn0034663.1 1 286 +
Chr2	stalkie_big_nohaplotig	CDS	10083514	10083798	.	-	0	Parent=FBgn0034663.1.mrna1;Target=FBgn0034663.1 442 726 +
Chr2	stalkie_big_nohaplotig	CDS	10083869	10084023	.	-	2	Parent=FBgn0034663.1.mrna1;Target=FBgn0034663.1 287 441 +
Chr2	stalkie_big_nohaplotig	CDS	10084094	10084379	.	-	0	Parent=FBgn0034663.1.mrna1;Target=FBgn0034663.1 1 286 +
Chr2	gffcl	locus	10086587	10087457	.	-	.	ID=RLOC_00014673;geneIDs=FBgn0034664.1.path1;transcripts=FBgn0034664.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10086587	10087457	.	-	.	ID=FBgn0034664.1.mrna1;geneID=FBgn0034664.1.path1;Name=FBgn0034664.1;Dir=sensecoverage=100.0;identity=99.0;matches=719;mismatches=7;indels=0;unknowns=0;locus=RLOC_00014673
Chr2	stalkie_big_nohaplotig	exon	10086587	10086910	99	-	.	Parent=FBgn0034664.1.mrna1;Target=FBgn0034664.1 403 726 +
Chr2	stalkie_big_nohaplotig	exon	10086976	10087133	98	-	.	Parent=FBgn0034664.1.mrna1;Target=FBgn0034664.1 245 402 +
Chr2	stalkie_big_nohaplotig	exon	10087214	10087457	99	-	.	Parent=FBgn0034664.1.mrna1;Target=FBgn0034664.1 1 244 +
Chr2	stalkie_big_nohaplotig	CDS	10086587	10086910	.	-	0	Parent=FBgn0034664.1.mrna1;Target=FBgn0034664.1 403 726 +
Chr2	stalkie_big_nohaplotig	CDS	10086976	10087133	.	-	2	Parent=FBgn0034664.1.mrna1;Target=FBgn0034664.1 245 402 +
Chr2	stalkie_big_nohaplotig	CDS	10087214	10087457	.	-	0	Parent=FBgn0034664.1.mrna1;Target=FBgn0034664.1 1 244 +
Chr2	gffcl	locus	10091199	10092175	.	-	.	ID=RLOC_00014674;geneIDs=comp150616_c0_seq1.path1;transcripts=comp150616_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10091199	10092175	.	-	.	ID=comp150616_c0_seq1.mrna1;geneID=comp150616_c0_seq1.path1;Name=comp150616_c0_seq1;Dir=indeterminatecoverage=97.6;identity=97.4;matches=964;mismatches=12;indels=14;unknowns=0;Target=comp150616_c0_seq1 989 1 .;CDS_Target=comp150616_c0_seq1 387 241 .;locus=RLOC_00014674
Chr2	stalkie_big_nohaplotig	exon	10091199	10092175	97	-	.	Parent=comp150616_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10091788	10091934	.	-	0	Parent=comp150616_c0_seq1.mrna1
Chr2	gffcl	locus	10094159	10101011	.	+	.	ID=RLOC_00014675;geneIDs=FBgn0034797.1.path1;transcripts=FBgn0034797.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10094159	10101011	.	+	.	ID=FBgn0034797.1.mrna1;geneID=FBgn0034797.1.path1;Name=FBgn0034797.1;Dir=sensecoverage=100.0;identity=96.9;matches=2425;mismatches=23;indels=54;unknowns=0;locus=RLOC_00014675
Chr2	stalkie_big_nohaplotig	exon	10094159	10094324	75	+	.	Parent=FBgn0034797.1.mrna1;Target=FBgn0034797.1 1 220 +
Chr2	stalkie_big_nohaplotig	exon	10094466	10094909	99	+	.	Parent=FBgn0034797.1.mrna1;Target=FBgn0034797.1 221 664 +
Chr2	stalkie_big_nohaplotig	exon	10094966	10095393	99	+	.	Parent=FBgn0034797.1.mrna1;Target=FBgn0034797.1 665 1092 +
Chr2	stalkie_big_nohaplotig	exon	10095466	10095613	98	+	.	Parent=FBgn0034797.1.mrna1;Target=FBgn0034797.1 1093 1240 +
Chr2	stalkie_big_nohaplotig	exon	10095681	10095897	99	+	.	Parent=FBgn0034797.1.mrna1;Target=FBgn0034797.1 1241 1457 +
Chr2	stalkie_big_nohaplotig	exon	10095961	10096181	98	+	.	Parent=FBgn0034797.1.mrna1;Target=FBgn0034797.1 1458 1678 +
Chr2	stalkie_big_nohaplotig	exon	10096242	10096405	100	+	.	Parent=FBgn0034797.1.mrna1;Target=FBgn0034797.1 1679 1842 +
Chr2	stalkie_big_nohaplotig	exon	10100352	10101011	98	+	.	Parent=FBgn0034797.1.mrna1;Target=FBgn0034797.1 1843 2502 +
Chr2	stalkie_big_nohaplotig	CDS	10094159	10094324	.	+	0	Parent=FBgn0034797.1.mrna1;Target=FBgn0034797.1 1 220 +
Chr2	stalkie_big_nohaplotig	CDS	10094466	10094909	.	+	2	Parent=FBgn0034797.1.mrna1;Target=FBgn0034797.1 221 664 +
Chr2	stalkie_big_nohaplotig	CDS	10094966	10095393	.	+	2	Parent=FBgn0034797.1.mrna1;Target=FBgn0034797.1 665 1092 +
Chr2	stalkie_big_nohaplotig	CDS	10095466	10095613	.	+	0	Parent=FBgn0034797.1.mrna1;Target=FBgn0034797.1 1093 1240 +
Chr2	stalkie_big_nohaplotig	CDS	10095681	10095897	.	+	2	Parent=FBgn0034797.1.mrna1;Target=FBgn0034797.1 1241 1457 +
Chr2	stalkie_big_nohaplotig	CDS	10095961	10096181	.	+	1	Parent=FBgn0034797.1.mrna1;Target=FBgn0034797.1 1458 1678 +
Chr2	stalkie_big_nohaplotig	CDS	10096242	10096405	.	+	2	Parent=FBgn0034797.1.mrna1;Target=FBgn0034797.1 1679 1842 +
Chr2	stalkie_big_nohaplotig	CDS	10100352	10101011	.	+	0	Parent=FBgn0034797.1.mrna1;Target=FBgn0034797.1 1843 2502 +
Chr2	gffcl	locus	10097351	10098524	.	-	.	ID=RLOC_00014676;geneIDs=comp152941_c0_seq1.path2;transcripts=comp152941_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	10097351	10098524	.	-	.	ID=comp152941_c0_seq1.mrna2;geneID=comp152941_c0_seq1.path2;Name=comp152941_c0_seq1;Dir=indeterminatecoverage=95.8;identity=97.9;matches=1152;mismatches=22;indels=3;unknowns=0;Target=comp152941_c0_seq1 1228 52 .;CDS_Target=comp152941_c0_seq1 61 52 .;locus=RLOC_00014676
Chr2	stalkie_big_nohaplotig	exon	10097351	10098524	97	-	.	Parent=comp152941_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	10098515	10098524	.	-	2	Parent=comp152941_c0_seq1.mrna2
Chr2	gffcl	locus	10101866	10412870	.	+	.	ID=RLOC_00014677;geneIDs=FBgn0033737.1.path1,FBgn0050460.1.path1,comp150194_c1_seq1.path1,comp160836_c0_seq1.path1;transcripts=comp160836_c0_seq1.mrna1,comp150194_c1_seq1.mrna1,FBgn0050460.1.mrna1,FBgn0033737.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10101866	10231344	.	+	.	ID=comp160836_c0_seq1.mrna1;geneID=comp160836_c0_seq1.path1;Name=comp160836_c0_seq1;Dir=sensecoverage=40.4;identity=98.5;matches=2034;mismatches=26;indels=6;unknowns=0;Target=comp160836_c0_seq1 2118 2168 +;locus=RLOC_00014677
Chr2	stalkie_big_nohaplotig	exon	10101866	10102304	99	+	.	Parent=comp160836_c0_seq1.mrna1;Target=comp160836_c0_seq1 1448 1887 +
Chr2	stalkie_big_nohaplotig	exon	10102312	10103896	98	+	.	Parent=comp160836_c0_seq1.mrna1;Target=comp160836_c0_seq1 2049 3630 +
Chr2	stalkie_big_nohaplotig	exon	10111798	10111801	100	+	.	Parent=comp160836_c0_seq1.mrna1;Target=comp160836_c0_seq1 3631 3634 +
Chr2	stalkie_big_nohaplotig	exon	10126636	10126638	100	+	.	Parent=comp160836_c0_seq1.mrna1;Target=comp160836_c0_seq1 3635 3637 +
Chr2	stalkie_big_nohaplotig	exon	10149630	10149631	100	+	.	Parent=comp160836_c0_seq1.mrna1;Target=comp160836_c0_seq1 3638 3639 +
Chr2	stalkie_big_nohaplotig	exon	10155508	10155509	100	+	.	Parent=comp160836_c0_seq1.mrna1;Target=comp160836_c0_seq1 3640 3641 +
Chr2	stalkie_big_nohaplotig	exon	10175732	10175735	100	+	.	Parent=comp160836_c0_seq1.mrna1;Target=comp160836_c0_seq1 3642 3645 +
Chr2	stalkie_big_nohaplotig	exon	10176951	10176954	100	+	.	Parent=comp160836_c0_seq1.mrna1;Target=comp160836_c0_seq1 3646 3649 +
Chr2	stalkie_big_nohaplotig	exon	10214116	10214124	100	+	.	Parent=comp160836_c0_seq1.mrna1;Target=comp160836_c0_seq1 3650 3658 +
Chr2	stalkie_big_nohaplotig	exon	10228227	10228232	100	+	.	Parent=comp160836_c0_seq1.mrna1;Target=comp160836_c0_seq1 3659 3664 +
Chr2	stalkie_big_nohaplotig	exon	10231339	10231344	100	+	.	Parent=comp160836_c0_seq1.mrna1;Target=comp160836_c0_seq1 3665 3670 +
Chr2	stalkie_big_nohaplotig	CDS	10102381	10102432	.	+	0	Parent=comp160836_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10170623	10412870	.	+	.	ID=comp150194_c1_seq1.mrna1;geneID=comp150194_c1_seq1.path1;Name=comp150194_c1_seq1;Dir=sensecoverage=74.4;identity=84.0;matches=715;mismatches=77;indels=59;unknowns=32;locus=RLOC_00014677
Chr2	stalkie_big_nohaplotig	exon	10170623	10170644	100	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 1 22 +
Chr2	stalkie_big_nohaplotig	exon	10171781	10172211	98	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 23 447 +
Chr2	stalkie_big_nohaplotig	exon	10174902	10174914	92	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 448 460 +
Chr2	stalkie_big_nohaplotig	exon	10180513	10180524	83	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 461 472 +
Chr2	stalkie_big_nohaplotig	exon	10182578	10182584	100	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 473 479 +
Chr2	stalkie_big_nohaplotig	exon	10182745	10182747	100	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 480 482 +
Chr2	stalkie_big_nohaplotig	exon	10183315	10183316	100	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 483 484 +
Chr2	stalkie_big_nohaplotig	exon	10189332	10189338	100	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 485 491 +
Chr2	stalkie_big_nohaplotig	exon	10194677	10194682	100	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 492 497 +
Chr2	stalkie_big_nohaplotig	exon	10197908	10197914	100	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 498 504 +
Chr2	stalkie_big_nohaplotig	exon	10203426	10203437	100	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 505 516 +
Chr2	stalkie_big_nohaplotig	exon	10231399	10231407	100	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 517 525 +
Chr2	stalkie_big_nohaplotig	exon	10271502	10271504	100	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 620 622 +
Chr2	stalkie_big_nohaplotig	exon	10284181	10284186	100	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 623 628 +
Chr2	stalkie_big_nohaplotig	exon	10286803	10286812	90	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 629 638 +
Chr2	stalkie_big_nohaplotig	exon	10301841	10301844	100	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 639 642 +
Chr2	stalkie_big_nohaplotig	exon	10304146	10304152	100	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 643 649 +
Chr2	stalkie_big_nohaplotig	exon	10311181	10311190	100	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 650 659 +
Chr2	stalkie_big_nohaplotig	exon	10325359	10325436	47	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 664 742 +
Chr2	stalkie_big_nohaplotig	exon	10335843	10335846	100	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 743 746 +
Chr2	stalkie_big_nohaplotig	exon	10365011	10365100	40	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 747 831 +
Chr2	stalkie_big_nohaplotig	exon	10375395	10375403	100	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 832 840 +
Chr2	stalkie_big_nohaplotig	exon	10382807	10382820	78	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 841 854 +
Chr2	stalkie_big_nohaplotig	exon	10387160	10387173	85	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 855 868 +
Chr2	stalkie_big_nohaplotig	exon	10394830	10394837	87	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 869 876 +
Chr2	stalkie_big_nohaplotig	exon	10395572	10395585	85	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 877 889 +
Chr2	stalkie_big_nohaplotig	exon	10408134	10408143	90	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 890 899 +
Chr2	stalkie_big_nohaplotig	exon	10412838	10412870	44	+	.	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 900 958 +
Chr2	stalkie_big_nohaplotig	CDS	10172125	10172211	.	+	0	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 367 447 +
Chr2	stalkie_big_nohaplotig	CDS	10174902	10174914	.	+	0	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 448 460 +
Chr2	stalkie_big_nohaplotig	CDS	10180513	10180524	.	+	2	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 461 472 +
Chr2	stalkie_big_nohaplotig	CDS	10182578	10182584	.	+	2	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 473 479 +
Chr2	stalkie_big_nohaplotig	CDS	10182745	10182747	.	+	1	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 480 482 +
Chr2	stalkie_big_nohaplotig	CDS	10183315	10183316	.	+	1	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 483 484 +
Chr2	stalkie_big_nohaplotig	CDS	10189332	10189333	.	+	2	Parent=comp150194_c1_seq1.mrna1;Target=comp150194_c1_seq1 485 486 +
Chr2	stalkie_big_nohaplotig	mRNA	10188373	10233247	.	+	.	ID=FBgn0050460.1.mrna1;geneID=FBgn0050460.1.path1;Name=FBgn0050460.1;Dir=sensecoverage=100.0;identity=99.3;matches=4447;mismatches=20;indels=12;unknowns=0;locus=RLOC_00014677
Chr2	stalkie_big_nohaplotig	exon	10188373	10188577	100	+	.	Parent=FBgn0050460.1.mrna1;Target=FBgn0050460.1 1 205 +
Chr2	stalkie_big_nohaplotig	exon	10223336	10223601	99	+	.	Parent=FBgn0050460.1.mrna1;Target=FBgn0050460.1 206 471 +
Chr2	stalkie_big_nohaplotig	exon	10223667	10224007	99	+	.	Parent=FBgn0050460.1.mrna1;Target=FBgn0050460.1 472 812 +
Chr2	stalkie_big_nohaplotig	exon	10224081	10224386	100	+	.	Parent=FBgn0050460.1.mrna1;Target=FBgn0050460.1 813 1118 +
Chr2	stalkie_big_nohaplotig	exon	10229250	10231907	99	+	.	Parent=FBgn0050460.1.mrna1;Target=FBgn0050460.1 1119 3776 +
Chr2	stalkie_big_nohaplotig	exon	10232551	10233247	97	+	.	Parent=FBgn0050460.1.mrna1;Target=FBgn0050460.1 3777 4473 +
Chr2	stalkie_big_nohaplotig	CDS	10188373	10188577	.	+	0	Parent=FBgn0050460.1.mrna1;Target=FBgn0050460.1 1 205 +
Chr2	stalkie_big_nohaplotig	CDS	10223336	10223601	.	+	2	Parent=FBgn0050460.1.mrna1;Target=FBgn0050460.1 206 471 +
Chr2	stalkie_big_nohaplotig	CDS	10223667	10224007	.	+	0	Parent=FBgn0050460.1.mrna1;Target=FBgn0050460.1 472 812 +
Chr2	stalkie_big_nohaplotig	CDS	10224081	10224386	.	+	1	Parent=FBgn0050460.1.mrna1;Target=FBgn0050460.1 813 1118 +
Chr2	stalkie_big_nohaplotig	CDS	10229250	10231907	.	+	1	Parent=FBgn0050460.1.mrna1;Target=FBgn0050460.1 1119 3776 +
Chr2	stalkie_big_nohaplotig	CDS	10232551	10233247	.	+	1	Parent=FBgn0050460.1.mrna1;Target=FBgn0050460.1 3777 4473 +
Chr2	stalkie_big_nohaplotig	mRNA	10269834	10273079	.	+	.	ID=FBgn0033737.1.mrna1;geneID=FBgn0033737.1.path1;Name=FBgn0033737.1;Dir=sensecoverage=100.0;identity=99.8;matches=1839;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014677
Chr2	stalkie_big_nohaplotig	exon	10269834	10269891	98	+	.	Parent=FBgn0033737.1.mrna1;Target=FBgn0033737.1 1 58 +
Chr2	stalkie_big_nohaplotig	exon	10270861	10270980	100	+	.	Parent=FBgn0033737.1.mrna1;Target=FBgn0033737.1 59 178 +
Chr2	stalkie_big_nohaplotig	exon	10271140	10271535	100	+	.	Parent=FBgn0033737.1.mrna1;Target=FBgn0033737.1 179 574 +
Chr2	stalkie_big_nohaplotig	exon	10271598	10271967	100	+	.	Parent=FBgn0033737.1.mrna1;Target=FBgn0033737.1 575 944 +
Chr2	stalkie_big_nohaplotig	exon	10272046	10272607	100	+	.	Parent=FBgn0033737.1.mrna1;Target=FBgn0033737.1 945 1506 +
Chr2	stalkie_big_nohaplotig	exon	10272672	10272791	99	+	.	Parent=FBgn0033737.1.mrna1;Target=FBgn0033737.1 1507 1626 +
Chr2	stalkie_big_nohaplotig	exon	10272864	10273079	99	+	.	Parent=FBgn0033737.1.mrna1;Target=FBgn0033737.1 1627 1842 +
Chr2	stalkie_big_nohaplotig	CDS	10269834	10269891	.	+	0	Parent=FBgn0033737.1.mrna1;Target=FBgn0033737.1 1 58 +
Chr2	stalkie_big_nohaplotig	CDS	10270861	10270980	.	+	2	Parent=FBgn0033737.1.mrna1;Target=FBgn0033737.1 59 178 +
Chr2	stalkie_big_nohaplotig	CDS	10271140	10271535	.	+	2	Parent=FBgn0033737.1.mrna1;Target=FBgn0033737.1 179 574 +
Chr2	stalkie_big_nohaplotig	CDS	10271598	10271967	.	+	2	Parent=FBgn0033737.1.mrna1;Target=FBgn0033737.1 575 944 +
Chr2	stalkie_big_nohaplotig	CDS	10272046	10272607	.	+	1	Parent=FBgn0033737.1.mrna1;Target=FBgn0033737.1 945 1506 +
Chr2	stalkie_big_nohaplotig	CDS	10272672	10272791	.	+	0	Parent=FBgn0033737.1.mrna1;Target=FBgn0033737.1 1507 1626 +
Chr2	stalkie_big_nohaplotig	CDS	10272864	10273079	.	+	0	Parent=FBgn0033737.1.mrna1;Target=FBgn0033737.1 1627 1842 +
Chr2	gffcl	locus	10106679	10110649	.	+	.	ID=RLOC_00014678;geneIDs=FBgn0034009.1.path1;transcripts=FBgn0034009.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10106679	10110649	.	+	.	ID=FBgn0034009.1.mrna1;geneID=FBgn0034009.1.path1;Name=FBgn0034009.1;Dir=sensecoverage=100.0;identity=99.5;matches=3390;mismatches=17;indels=1;unknowns=0;locus=RLOC_00014678
Chr2	stalkie_big_nohaplotig	exon	10106679	10106741	100	+	.	Parent=FBgn0034009.1.mrna1;Target=FBgn0034009.1 1 63 +
Chr2	stalkie_big_nohaplotig	exon	10106794	10107604	99	+	.	Parent=FBgn0034009.1.mrna1;Target=FBgn0034009.1 64 874 +
Chr2	stalkie_big_nohaplotig	exon	10107659	10108182	99	+	.	Parent=FBgn0034009.1.mrna1;Target=FBgn0034009.1 875 1398 +
Chr2	stalkie_big_nohaplotig	exon	10108233	10109103	99	+	.	Parent=FBgn0034009.1.mrna1;Target=FBgn0034009.1 1399 2269 +
Chr2	stalkie_big_nohaplotig	exon	10109512	10110649	98	+	.	Parent=FBgn0034009.1.mrna1;Target=FBgn0034009.1 2270 3408 +
Chr2	stalkie_big_nohaplotig	CDS	10106679	10106741	.	+	0	Parent=FBgn0034009.1.mrna1;Target=FBgn0034009.1 1 63 +
Chr2	stalkie_big_nohaplotig	CDS	10106794	10107604	.	+	0	Parent=FBgn0034009.1.mrna1;Target=FBgn0034009.1 64 874 +
Chr2	stalkie_big_nohaplotig	CDS	10107659	10108182	.	+	2	Parent=FBgn0034009.1.mrna1;Target=FBgn0034009.1 875 1398 +
Chr2	stalkie_big_nohaplotig	CDS	10108233	10109103	.	+	0	Parent=FBgn0034009.1.mrna1;Target=FBgn0034009.1 1399 2269 +
Chr2	stalkie_big_nohaplotig	CDS	10109512	10110649	.	+	2	Parent=FBgn0034009.1.mrna1;Target=FBgn0034009.1 2270 3408 +
Chr2	gffcl	locus	10114751	10263547	.	-	.	ID=RLOC_00014679;geneIDs=FBgn0004698.1.path1,comp50621_c0_seq1.path1;transcripts=FBgn0004698.1.mrna1,comp50621_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10114751	10263547	.	-	.	ID=FBgn0004698.1.mrna1;geneID=FBgn0004698.1.path1;Name=FBgn0004698.1;Dir=sensecoverage=100.0;identity=99.4;matches=2616;mismatches=14;indels=2;unknowns=0;locus=RLOC_00014679
Chr2	stalkie_big_nohaplotig	exon	10114751	10116437	99	-	.	Parent=FBgn0004698.1.mrna1;Target=FBgn0004698.1 944 2631 +
Chr2	stalkie_big_nohaplotig	exon	10262538	10263295	99	-	.	Parent=FBgn0004698.1.mrna1;Target=FBgn0004698.1 186 943 +
Chr2	stalkie_big_nohaplotig	exon	10263362	10263547	99	-	.	Parent=FBgn0004698.1.mrna1;Target=FBgn0004698.1 1 185 +
Chr2	stalkie_big_nohaplotig	CDS	10263258	10263295	.	-	2	Parent=FBgn0004698.1.mrna1;Target=FBgn0004698.1 186 223 +
Chr2	stalkie_big_nohaplotig	CDS	10263362	10263530	.	-	0	Parent=FBgn0004698.1.mrna1;Target=FBgn0004698.1 17 185 +
Chr2	stalkie_big_nohaplotig	mRNA	10262313	10262561	.	-	.	ID=comp50621_c0_seq1.mrna1;geneID=comp50621_c0_seq1.path1;Name=comp50621_c0_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=249;mismatches=0;indels=0;unknowns=0;Target=comp50621_c0_seq1 249 1 .;CDS_Target=comp50621_c0_seq1 135 1 .;locus=RLOC_00014679
Chr2	stalkie_big_nohaplotig	exon	10262313	10262561	100	-	.	Parent=comp50621_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10262427	10262561	.	-	0	Parent=comp50621_c0_seq1.mrna1
Chr2	gffcl	locus	10118327	10118459	.	-	.	ID=RLOC_00014680;geneIDs=comp499059_c0_seq1.path1;transcripts=comp499059_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10118327	10118459	.	-	.	ID=comp499059_c0_seq1.mrna1;geneID=comp499059_c0_seq1.path1;Name=comp499059_c0_seq1;Dir=indeterminatecoverage=64.6;identity=100.0;matches=133;mismatches=0;indels=0;unknowns=0;Target=comp499059_c0_seq1 206 74 .;CDS_Target=comp499059_c0_seq1 111 76 .;locus=RLOC_00014680
Chr2	stalkie_big_nohaplotig	exon	10118327	10118459	100	-	.	Parent=comp499059_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10118422	10118457	.	-	0	Parent=comp499059_c0_seq1.mrna1
Chr2	gffcl	locus	10122326	10125630	.	-	.	ID=RLOC_00014681;geneIDs=FBgn0034371.1.path1;transcripts=FBgn0034371.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10122326	10125630	.	-	.	ID=FBgn0034371.1.mrna1;geneID=FBgn0034371.1.path1;Name=FBgn0034371.1;Dir=sensecoverage=100.0;identity=99.9;matches=959;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014681
Chr2	stalkie_big_nohaplotig	exon	10122326	10122448	100	-	.	Parent=FBgn0034371.1.mrna1;Target=FBgn0034371.1 838 960 +
Chr2	stalkie_big_nohaplotig	exon	10122519	10122680	99	-	.	Parent=FBgn0034371.1.mrna1;Target=FBgn0034371.1 676 837 +
Chr2	stalkie_big_nohaplotig	exon	10122938	10123146	100	-	.	Parent=FBgn0034371.1.mrna1;Target=FBgn0034371.1 467 675 +
Chr2	stalkie_big_nohaplotig	exon	10125012	10125194	100	-	.	Parent=FBgn0034371.1.mrna1;Target=FBgn0034371.1 284 466 +
Chr2	stalkie_big_nohaplotig	exon	10125348	10125630	100	-	.	Parent=FBgn0034371.1.mrna1;Target=FBgn0034371.1 1 283 +
Chr2	stalkie_big_nohaplotig	CDS	10122326	10122448	.	-	0	Parent=FBgn0034371.1.mrna1;Target=FBgn0034371.1 838 960 +
Chr2	stalkie_big_nohaplotig	CDS	10122519	10122680	.	-	0	Parent=FBgn0034371.1.mrna1;Target=FBgn0034371.1 676 837 +
Chr2	stalkie_big_nohaplotig	CDS	10122938	10123146	.	-	2	Parent=FBgn0034371.1.mrna1;Target=FBgn0034371.1 467 675 +
Chr2	stalkie_big_nohaplotig	CDS	10125012	10125194	.	-	2	Parent=FBgn0034371.1.mrna1;Target=FBgn0034371.1 284 466 +
Chr2	stalkie_big_nohaplotig	CDS	10125348	10125630	.	-	0	Parent=FBgn0034371.1.mrna1;Target=FBgn0034371.1 1 283 +
Chr2	gffcl	locus	10181467	10182583	.	-	.	ID=RLOC_00014682;geneIDs=comp146676_c0_seq1.path1;transcripts=comp146676_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10181467	10182583	.	-	.	ID=comp146676_c0_seq1.mrna1;geneID=comp146676_c0_seq1.path1;Name=comp146676_c0_seq1;Dir=sensecoverage=98.4;identity=99.4;matches=1002;mismatches=2;indels=4;unknowns=0;Target=comp146676_c0_seq1 815 934 +;locus=RLOC_00014682
Chr2	stalkie_big_nohaplotig	exon	10181467	10182132	100	-	.	Parent=comp146676_c0_seq1.mrna1;Target=comp146676_c0_seq1 343 1008 +
Chr2	stalkie_big_nohaplotig	exon	10182246	10182583	98	-	.	Parent=comp146676_c0_seq1.mrna1;Target=comp146676_c0_seq1 1 342 +
Chr2	stalkie_big_nohaplotig	CDS	10181541	10181660	.	-	0	Parent=comp146676_c0_seq1.mrna1
Chr2	gffcl	locus	10204403	10212399	.	+	.	ID=RLOC_00014683;geneIDs=comp115854_c0_seq1.path1,comp158183_c0_seq1.path1;transcripts=comp158183_c0_seq1.mrna1,comp115854_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10204403	10206019	.	+	.	ID=comp158183_c0_seq1.mrna1;geneID=comp158183_c0_seq1.path1;Name=comp158183_c0_seq1;Dir=antisensecoverage=98.6;identity=98.1;matches=1531;mismatches=26;indels=4;unknowns=0;locus=RLOC_00014683
Chr2	stalkie_big_nohaplotig	exon	10204403	10204718	99	+	.	Parent=comp158183_c0_seq1.mrna1;Target=comp158183_c0_seq1 1266 1582 -
Chr2	stalkie_big_nohaplotig	exon	10204778	10206019	97	+	.	Parent=comp158183_c0_seq1.mrna1;Target=comp158183_c0_seq1 23 1265 -
Chr2	stalkie_big_nohaplotig	CDS	10204584	10204718	.	+	0	Parent=comp158183_c0_seq1.mrna1;Target=comp158183_c0_seq1 1266 1400 .
Chr2	stalkie_big_nohaplotig	CDS	10204778	10205822	.	+	0	Parent=comp158183_c0_seq1.mrna1;Target=comp158183_c0_seq1 219 1265 .
Chr2	stalkie_big_nohaplotig	mRNA	10205996	10212399	.	+	.	ID=comp115854_c0_seq1.mrna1;geneID=comp115854_c0_seq1.path1;Name=comp115854_c0_seq1;Dir=sensecoverage=99.7;identity=99.7;matches=296;mismatches=1;indels=0;unknowns=0;Target=comp115854_c0_seq1 76 258 +;locus=RLOC_00014683
Chr2	stalkie_big_nohaplotig	exon	10205996	10206019	95	+	.	Parent=comp115854_c0_seq1.mrna1;Target=comp115854_c0_seq1 1 24 +
Chr2	stalkie_big_nohaplotig	exon	10212127	10212399	100	+	.	Parent=comp115854_c0_seq1.mrna1;Target=comp115854_c0_seq1 25 297 +
Chr2	stalkie_big_nohaplotig	CDS	10212178	10212360	.	+	0	Parent=comp115854_c0_seq1.mrna1
Chr2	gffcl	locus	10215083	10215997	.	+	.	ID=RLOC_00014684;geneIDs=comp151319_c0_seq1.path1;transcripts=comp151319_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10215083	10215997	.	+	.	ID=comp151319_c0_seq1.mrna1;geneID=comp151319_c0_seq1.path1;Name=comp151319_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.3;matches=910;mismatches=4;indels=2;unknowns=0;Target=comp151319_c0_seq1 916 2 .;CDS_Target=comp151319_c0_seq1 357 43 .;locus=RLOC_00014684
Chr2	stalkie_big_nohaplotig	exon	10215083	10215997	99	+	.	Parent=comp151319_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10215125	10215438	.	+	0	Parent=comp151319_c0_seq1.mrna1
Chr2	gffcl	locus	10238182	10239266	.	+	.	ID=RLOC_00014685;geneIDs=FBgn0033888.1.path1;transcripts=FBgn0033888.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10238182	10239266	.	+	.	ID=FBgn0033888.1.mrna1;geneID=FBgn0033888.1.path1;Name=FBgn0033888.1;Dir=sensecoverage=100.0;identity=99.2;matches=952;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014685
Chr2	stalkie_big_nohaplotig	exon	10238182	10238984	99	+	.	Parent=FBgn0033888.1.mrna1;Target=FBgn0033888.1 1 803 +
Chr2	stalkie_big_nohaplotig	exon	10239110	10239266	100	+	.	Parent=FBgn0033888.1.mrna1;Target=FBgn0033888.1 804 960 +
Chr2	stalkie_big_nohaplotig	CDS	10238182	10238984	.	+	0	Parent=FBgn0033888.1.mrna1;Target=FBgn0033888.1 1 803 +
Chr2	stalkie_big_nohaplotig	CDS	10239110	10239266	.	+	1	Parent=FBgn0033888.1.mrna1;Target=FBgn0033888.1 804 960 +
Chr2	gffcl	locus	10239803	10241589	.	-	.	ID=RLOC_00014686;geneIDs=FBgn0000018.1.path1;transcripts=FBgn0000018.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10239803	10241589	.	-	.	ID=FBgn0000018.1.mrna1;geneID=FBgn0000018.1.path1;Name=FBgn0000018.1;Dir=sensecoverage=100.0;identity=99.8;matches=1619;mismatches=4;indels=0;unknowns=0;locus=RLOC_00014686
Chr2	stalkie_big_nohaplotig	exon	10239803	10240175	100	-	.	Parent=FBgn0000018.1.mrna1;Target=FBgn0000018.1 1251 1623 +
Chr2	stalkie_big_nohaplotig	exon	10240250	10240533	100	-	.	Parent=FBgn0000018.1.mrna1;Target=FBgn0000018.1 967 1250 +
Chr2	stalkie_big_nohaplotig	exon	10240624	10241589	99	-	.	Parent=FBgn0000018.1.mrna1;Target=FBgn0000018.1 1 966 +
Chr2	stalkie_big_nohaplotig	CDS	10239803	10240175	.	-	1	Parent=FBgn0000018.1.mrna1;Target=FBgn0000018.1 1251 1623 +
Chr2	stalkie_big_nohaplotig	CDS	10240250	10240533	.	-	0	Parent=FBgn0000018.1.mrna1;Target=FBgn0000018.1 967 1250 +
Chr2	stalkie_big_nohaplotig	CDS	10240624	10241589	.	-	0	Parent=FBgn0000018.1.mrna1;Target=FBgn0000018.1 1 966 +
Chr2	gffcl	locus	10243302	10244543	.	+	.	ID=RLOC_00014687;geneIDs=FBgn0032376.1.path1;transcripts=FBgn0032376.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10243302	10244543	.	+	.	ID=FBgn0032376.1.mrna1;geneID=FBgn0032376.1.path1;Name=FBgn0032376.1;Dir=sensecoverage=100.0;identity=99.7;matches=1044;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014687
Chr2	stalkie_big_nohaplotig	exon	10243302	10243885	100	+	.	Parent=FBgn0032376.1.mrna1;Target=FBgn0032376.1 1 584 +
Chr2	stalkie_big_nohaplotig	exon	10243953	10244163	98	+	.	Parent=FBgn0032376.1.mrna1;Target=FBgn0032376.1 585 795 +
Chr2	stalkie_big_nohaplotig	exon	10244235	10244339	100	+	.	Parent=FBgn0032376.1.mrna1;Target=FBgn0032376.1 796 900 +
Chr2	stalkie_big_nohaplotig	exon	10244397	10244543	100	+	.	Parent=FBgn0032376.1.mrna1;Target=FBgn0032376.1 901 1047 +
Chr2	stalkie_big_nohaplotig	CDS	10243302	10243885	.	+	0	Parent=FBgn0032376.1.mrna1;Target=FBgn0032376.1 1 584 +
Chr2	stalkie_big_nohaplotig	CDS	10243953	10244163	.	+	1	Parent=FBgn0032376.1.mrna1;Target=FBgn0032376.1 585 795 +
Chr2	stalkie_big_nohaplotig	CDS	10244235	10244339	.	+	0	Parent=FBgn0032376.1.mrna1;Target=FBgn0032376.1 796 900 +
Chr2	stalkie_big_nohaplotig	CDS	10244397	10244543	.	+	0	Parent=FBgn0032376.1.mrna1;Target=FBgn0032376.1 901 1047 +
Chr2	gffcl	locus	10250505	11526539	.	-	.	ID=RLOC_00014689;geneIDs=comp115845_c0_seq1.path1;transcripts=comp115845_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10250505	11526539	.	-	.	ID=comp115845_c0_seq1.mrna1;geneID=comp115845_c0_seq1.path1;Name=comp115845_c0_seq1;Dir=indeterminatecoverage=89.6;identity=87.8;matches=252;mismatches=32;indels=3;unknowns=0;Target=comp115845_c0_seq1 38 3 .;locus=RLOC_00014689
Chr2	stalkie_big_nohaplotig	exon	10250505	10250742	88	-	.	Parent=comp115845_c0_seq1.mrna1;Target=comp115845_c0_seq1 285 49 .
Chr2	stalkie_big_nohaplotig	exon	11526492	11526539	85	-	.	Parent=comp115845_c0_seq1.mrna1;Target=comp115845_c0_seq1 48 1 .
Chr2	stalkie_big_nohaplotig	CDS	11526502	11526537	.	-	0	Parent=comp115845_c0_seq1.mrna1
Chr2	gffcl	locus	10250752	10251396	.	-	.	ID=RLOC_00014690;geneIDs=comp163005_c3_seq1.path1;transcripts=comp163005_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10250752	10251396	.	-	.	ID=comp163005_c3_seq1.mrna1;geneID=comp163005_c3_seq1.path1;Name=comp163005_c3_seq1;Dir=indeterminatecoverage=99.0;identity=88.9;matches=601;mismatches=41;indels=34;unknowns=0;Target=comp163005_c3_seq1 680 8 .;CDS_Target=comp163005_c3_seq1 670 506 .;locus=RLOC_00014690
Chr2	stalkie_big_nohaplotig	exon	10250752	10251396	88	-	.	Parent=comp163005_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10250762	10250926	.	-	0	Parent=comp163005_c3_seq1.mrna1
Chr2	gffcl	locus	10265017	10265467	.	+	.	ID=RLOC_00014691;geneIDs=FBgn0061360.1.path1;transcripts=FBgn0061360.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10265017	10265467	.	+	.	ID=FBgn0061360.1.mrna1;geneID=FBgn0061360.1.path1;Name=FBgn0061360.1;Dir=sensecoverage=100.0;identity=99.7;matches=374;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014691
Chr2	stalkie_big_nohaplotig	exon	10265017	10265089	100	+	.	Parent=FBgn0061360.1.mrna1;Target=FBgn0061360.1 1 73 +
Chr2	stalkie_big_nohaplotig	exon	10265166	10265467	99	+	.	Parent=FBgn0061360.1.mrna1;Target=FBgn0061360.1 74 375 +
Chr2	stalkie_big_nohaplotig	CDS	10265017	10265089	.	+	0	Parent=FBgn0061360.1.mrna1;Target=FBgn0061360.1 1 73 +
Chr2	stalkie_big_nohaplotig	CDS	10265166	10265467	.	+	2	Parent=FBgn0061360.1.mrna1;Target=FBgn0061360.1 74 375 +
Chr2	gffcl	locus	10265795	10267000	.	+	.	ID=RLOC_00014692;geneIDs=FBgn0061359.1.path1;transcripts=FBgn0061359.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10265795	10267000	.	+	.	ID=FBgn0061359.1.mrna1;geneID=FBgn0061359.1.path1;Name=FBgn0061359.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1202;mismatches=4;indels=0;unknowns=0;Target=FBgn0061359.1 1206 1 .;locus=RLOC_00014692
Chr2	stalkie_big_nohaplotig	exon	10265795	10267000	99	+	.	Parent=FBgn0061359.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10265795	10267000	.	+	0	Parent=FBgn0061359.1.mrna1
Chr2	gffcl	locus	10267320	10267945	.	-	.	ID=RLOC_00014693;geneIDs=FBgn0028683.2.path1;transcripts=FBgn0028683.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10267320	10267945	.	-	.	ID=FBgn0028683.2.mrna1;geneID=FBgn0028683.2.path1;Name=FBgn0028683.2;Dir=sensecoverage=100.0;identity=100.0;matches=378;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014693
Chr2	stalkie_big_nohaplotig	exon	10267320	10267598	100	-	.	Parent=FBgn0028683.2.mrna1;Target=FBgn0028683.2 100 378 +
Chr2	stalkie_big_nohaplotig	exon	10267847	10267945	100	-	.	Parent=FBgn0028683.2.mrna1;Target=FBgn0028683.2 1 99 +
Chr2	stalkie_big_nohaplotig	CDS	10267320	10267598	.	-	0	Parent=FBgn0028683.2.mrna1;Target=FBgn0028683.2 100 378 +
Chr2	stalkie_big_nohaplotig	CDS	10267847	10267945	.	-	0	Parent=FBgn0028683.2.mrna1;Target=FBgn0028683.2 1 99 +
Chr2	gffcl	locus	10279710	10280802	.	-	.	ID=RLOC_00014694;geneIDs=FBgn0033735.1.path1;transcripts=FBgn0033735.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10279710	10280802	.	-	.	ID=FBgn0033735.1.mrna1;geneID=FBgn0033735.1.path1;Name=FBgn0033735.1;Dir=sensecoverage=100.0;identity=100.0;matches=978;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014694
Chr2	stalkie_big_nohaplotig	exon	10279710	10280060	100	-	.	Parent=FBgn0033735.1.mrna1;Target=FBgn0033735.1 628 978 +
Chr2	stalkie_big_nohaplotig	exon	10280119	10280702	100	-	.	Parent=FBgn0033735.1.mrna1;Target=FBgn0033735.1 44 627 +
Chr2	stalkie_big_nohaplotig	exon	10280760	10280802	100	-	.	Parent=FBgn0033735.1.mrna1;Target=FBgn0033735.1 1 43 +
Chr2	stalkie_big_nohaplotig	CDS	10279710	10280060	.	-	0	Parent=FBgn0033735.1.mrna1;Target=FBgn0033735.1 628 978 +
Chr2	stalkie_big_nohaplotig	CDS	10280119	10280702	.	-	2	Parent=FBgn0033735.1.mrna1;Target=FBgn0033735.1 44 627 +
Chr2	stalkie_big_nohaplotig	CDS	10280760	10280802	.	-	0	Parent=FBgn0033735.1.mrna1;Target=FBgn0033735.1 1 43 +
Chr2	gffcl	locus	10281884	10283628	.	-	.	ID=RLOC_00014695;geneIDs=FBgn0033734.1.path1;transcripts=FBgn0033734.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10281884	10283628	.	-	.	ID=FBgn0033734.1.mrna1;geneID=FBgn0033734.1.path1;Name=FBgn0033734.1;Dir=sensecoverage=100.0;identity=99.7;matches=1424;mismatches=4;indels=0;unknowns=0;locus=RLOC_00014695
Chr2	stalkie_big_nohaplotig	exon	10281884	10282003	100	-	.	Parent=FBgn0033734.1.mrna1;Target=FBgn0033734.1 1309 1428 +
Chr2	stalkie_big_nohaplotig	exon	10282058	10282321	100	-	.	Parent=FBgn0033734.1.mrna1;Target=FBgn0033734.1 1045 1308 +
Chr2	stalkie_big_nohaplotig	exon	10282382	10282553	100	-	.	Parent=FBgn0033734.1.mrna1;Target=FBgn0033734.1 873 1044 +
Chr2	stalkie_big_nohaplotig	exon	10282678	10283111	99	-	.	Parent=FBgn0033734.1.mrna1;Target=FBgn0033734.1 439 872 +
Chr2	stalkie_big_nohaplotig	exon	10283191	10283628	99	-	.	Parent=FBgn0033734.1.mrna1;Target=FBgn0033734.1 1 438 +
Chr2	stalkie_big_nohaplotig	CDS	10281884	10282003	.	-	0	Parent=FBgn0033734.1.mrna1;Target=FBgn0033734.1 1309 1428 +
Chr2	stalkie_big_nohaplotig	CDS	10282058	10282321	.	-	0	Parent=FBgn0033734.1.mrna1;Target=FBgn0033734.1 1045 1308 +
Chr2	stalkie_big_nohaplotig	CDS	10282382	10282553	.	-	1	Parent=FBgn0033734.1.mrna1;Target=FBgn0033734.1 873 1044 +
Chr2	stalkie_big_nohaplotig	CDS	10282678	10283111	.	-	0	Parent=FBgn0033734.1.mrna1;Target=FBgn0033734.1 439 872 +
Chr2	stalkie_big_nohaplotig	CDS	10283191	10283628	.	-	0	Parent=FBgn0033734.1.mrna1;Target=FBgn0033734.1 1 438 +
Chr2	gffcl	locus	10294143	10294819	.	-	.	ID=RLOC_00014696;geneIDs=FBgn0033731.1.path1;transcripts=FBgn0033731.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10294143	10294819	.	-	.	ID=FBgn0033731.1.mrna1;geneID=FBgn0033731.1.path1;Name=FBgn0033731.1;Dir=sensecoverage=100.0;identity=99.7;matches=574;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014696
Chr2	stalkie_big_nohaplotig	exon	10294143	10294703	99	-	.	Parent=FBgn0033731.1.mrna1;Target=FBgn0033731.1 16 576 +
Chr2	stalkie_big_nohaplotig	exon	10294805	10294819	100	-	.	Parent=FBgn0033731.1.mrna1;Target=FBgn0033731.1 1 15 +
Chr2	stalkie_big_nohaplotig	CDS	10294143	10294703	.	-	0	Parent=FBgn0033731.1.mrna1;Target=FBgn0033731.1 16 576 +
Chr2	stalkie_big_nohaplotig	CDS	10294805	10294819	.	-	0	Parent=FBgn0033731.1.mrna1;Target=FBgn0033731.1 1 15 +
Chr2	gffcl	locus	10300779	10301528	.	-	.	ID=RLOC_00014697;geneIDs=comp113690_c0_seq1.path1;transcripts=comp113690_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10300779	10301528	.	-	.	ID=comp113690_c0_seq1.mrna1;geneID=comp113690_c0_seq1.path1;Name=comp113690_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=528;mismatches=0;indels=6;unknowns=0;Target=comp113690_c0_seq1 408 527 .;locus=RLOC_00014697
Chr2	stalkie_big_nohaplotig	exon	10300779	10301123	98	-	.	Parent=comp113690_c0_seq1.mrna1;Target=comp113690_c0_seq1 1 339 -
Chr2	stalkie_big_nohaplotig	exon	10301340	10301528	100	-	.	Parent=comp113690_c0_seq1.mrna1;Target=comp113690_c0_seq1 340 528 -
Chr2	stalkie_big_nohaplotig	CDS	10301408	10301527	.	-	0	Parent=comp113690_c0_seq1.mrna1
Chr2	gffcl	locus	10309317	10311189	.	-	.	ID=RLOC_00014698;geneIDs=FBgn0033730.1.path1;transcripts=FBgn0033730.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10309317	10311189	.	-	.	ID=FBgn0033730.1.mrna1;geneID=FBgn0033730.1.path1;Name=FBgn0033730.1;Dir=sensecoverage=100.0;identity=99.8;matches=401;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014698
Chr2	stalkie_big_nohaplotig	exon	10309317	10309551	100	-	.	Parent=FBgn0033730.1.mrna1;Target=FBgn0033730.1 168 402 +
Chr2	stalkie_big_nohaplotig	exon	10311023	10311189	99	-	.	Parent=FBgn0033730.1.mrna1;Target=FBgn0033730.1 1 167 +
Chr2	stalkie_big_nohaplotig	CDS	10309317	10309551	.	-	1	Parent=FBgn0033730.1.mrna1;Target=FBgn0033730.1 168 402 +
Chr2	stalkie_big_nohaplotig	CDS	10311023	10311189	.	-	0	Parent=FBgn0033730.1.mrna1;Target=FBgn0033730.1 1 167 +
Chr2	gffcl	locus	10310139	10310765	.	-	.	ID=RLOC_00014699;geneIDs=comp117504_c0_seq1.path1;transcripts=comp117504_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10310139	10310765	.	-	.	ID=comp117504_c0_seq1.mrna1;geneID=comp117504_c0_seq1.path1;Name=comp117504_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.1;matches=626;mismatches=1;indels=5;unknowns=0;Target=comp117504_c0_seq1 632 1 .;CDS_Target=comp117504_c0_seq1 340 155 .;locus=RLOC_00014699
Chr2	stalkie_big_nohaplotig	exon	10310139	10310765	99	-	.	Parent=comp117504_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10310431	10310616	.	-	0	Parent=comp117504_c0_seq1.mrna1
Chr2	gffcl	locus	10311801	10317198	.	-	.	ID=RLOC_00014700;geneIDs=FBgn0033729.1.path1;transcripts=FBgn0033729.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10311801	10317198	.	-	.	ID=FBgn0033729.1.mrna1;geneID=FBgn0033729.1.path1;Name=FBgn0033729.1;Dir=indeterminatecoverage=97.5;identity=99.8;matches=458;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014700
Chr2	stalkie_big_nohaplotig	exon	10311801	10311852	100	-	.	Parent=FBgn0033729.1.mrna1;Target=FBgn0033729.1 459 408 .
Chr2	stalkie_big_nohaplotig	exon	10315046	10315312	99	-	.	Parent=FBgn0033729.1.mrna1;Target=FBgn0033729.1 407 141 .
Chr2	stalkie_big_nohaplotig	exon	10317059	10317198	100	-	.	Parent=FBgn0033729.1.mrna1;Target=FBgn0033729.1 140 1 .
Chr2	stalkie_big_nohaplotig	CDS	10311801	10311852	.	-	1	Parent=FBgn0033729.1.mrna1;Target=FBgn0033729.1 459 408 .
Chr2	stalkie_big_nohaplotig	CDS	10315046	10315312	.	-	1	Parent=FBgn0033729.1.mrna1;Target=FBgn0033729.1 407 141 .
Chr2	stalkie_big_nohaplotig	CDS	10317059	10317198	.	-	0	Parent=FBgn0033729.1.mrna1;Target=FBgn0033729.1 140 1 .
Chr2	gffcl	locus	10317435	10317731	.	+	.	ID=RLOC_00014701;geneIDs=comp142891_c0_seq1.path1;transcripts=comp142891_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10317435	10317731	.	+	.	ID=comp142891_c0_seq1.mrna1;geneID=comp142891_c0_seq1.path1;Name=comp142891_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=296;mismatches=1;indels=0;unknowns=0;Target=comp142891_c0_seq1 297 1 .;CDS_Target=comp142891_c0_seq1 72 1 .;locus=RLOC_00014701
Chr2	stalkie_big_nohaplotig	exon	10317435	10317731	99	+	.	Parent=comp142891_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10317435	10317506	.	+	0	Parent=comp142891_c0_seq1.mrna1
Chr2	gffcl	locus	10320577	10329313	.	-	.	ID=RLOC_00014702;geneIDs=FBgn0033728.1.path1;transcripts=FBgn0033728.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10320577	10329313	.	-	.	ID=FBgn0033728.1.mrna1;geneID=FBgn0033728.1.path1;Name=FBgn0033728.1;Dir=sensecoverage=100.0;identity=100.0;matches=420;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014702
Chr2	stalkie_big_nohaplotig	exon	10320577	10320844	100	-	.	Parent=FBgn0033728.1.mrna1;Target=FBgn0033728.1 153 420 +
Chr2	stalkie_big_nohaplotig	exon	10323016	10323143	100	-	.	Parent=FBgn0033728.1.mrna1;Target=FBgn0033728.1 25 152 +
Chr2	stalkie_big_nohaplotig	exon	10329290	10329313	100	-	.	Parent=FBgn0033728.1.mrna1;Target=FBgn0033728.1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	10320577	10320844	.	-	1	Parent=FBgn0033728.1.mrna1;Target=FBgn0033728.1 153 420 +
Chr2	stalkie_big_nohaplotig	CDS	10323016	10323143	.	-	0	Parent=FBgn0033728.1.mrna1;Target=FBgn0033728.1 25 152 +
Chr2	stalkie_big_nohaplotig	CDS	10329290	10329313	.	-	0	Parent=FBgn0033728.1.mrna1;Target=FBgn0033728.1 1 24 +
Chr2	gffcl	locus	10337887	10346494	.	-	.	ID=RLOC_00014703;geneIDs=FBgn0033725.1.path1,comp145877_c0_seq1.path1,comp154279_c0_seq1.path1,comp160922_c0_seq1.path1,comp170185_c0_seq1.path1;transcripts=FBgn0033725.1.mrna1,comp145877_c0_seq1.mrna1,comp154279_c0_seq1.mrna1,comp160922_c0_seq1.mrna1,comp170185_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10337887	10346494	.	-	.	ID=FBgn0033725.1.mrna1;geneID=FBgn0033725.1.path1;Name=FBgn0033725.1;Dir=sensecoverage=100.0;identity=100.0;matches=1131;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014703
Chr2	stalkie_big_nohaplotig	exon	10337887	10338382	100	-	.	Parent=FBgn0033725.1.mrna1;Target=FBgn0033725.1 636 1131 +
Chr2	stalkie_big_nohaplotig	exon	10338939	10339102	100	-	.	Parent=FBgn0033725.1.mrna1;Target=FBgn0033725.1 472 635 +
Chr2	stalkie_big_nohaplotig	exon	10339168	10339169	100	-	.	Parent=FBgn0033725.1.mrna1;Target=FBgn0033725.1 470 471 +
Chr2	stalkie_big_nohaplotig	exon	10339928	10339941	100	-	.	Parent=FBgn0033725.1.mrna1;Target=FBgn0033725.1 456 469 +
Chr2	stalkie_big_nohaplotig	exon	10340931	10341081	100	-	.	Parent=FBgn0033725.1.mrna1;Target=FBgn0033725.1 305 455 +
Chr2	stalkie_big_nohaplotig	exon	10343198	10343227	100	-	.	Parent=FBgn0033725.1.mrna1;Target=FBgn0033725.1 275 304 +
Chr2	stalkie_big_nohaplotig	exon	10343703	10343877	100	-	.	Parent=FBgn0033725.1.mrna1;Target=FBgn0033725.1 100 274 +
Chr2	stalkie_big_nohaplotig	exon	10346396	10346494	100	-	.	Parent=FBgn0033725.1.mrna1;Target=FBgn0033725.1 1 99 +
Chr2	stalkie_big_nohaplotig	CDS	10337887	10338382	.	-	1	Parent=FBgn0033725.1.mrna1;Target=FBgn0033725.1 636 1131 +
Chr2	stalkie_big_nohaplotig	CDS	10338939	10339102	.	-	0	Parent=FBgn0033725.1.mrna1;Target=FBgn0033725.1 472 635 +
Chr2	stalkie_big_nohaplotig	CDS	10339168	10339169	.	-	2	Parent=FBgn0033725.1.mrna1;Target=FBgn0033725.1 470 471 +
Chr2	stalkie_big_nohaplotig	CDS	10339928	10339941	.	-	1	Parent=FBgn0033725.1.mrna1;Target=FBgn0033725.1 456 469 +
Chr2	stalkie_big_nohaplotig	CDS	10340931	10341081	.	-	2	Parent=FBgn0033725.1.mrna1;Target=FBgn0033725.1 305 455 +
Chr2	stalkie_big_nohaplotig	CDS	10343198	10343227	.	-	2	Parent=FBgn0033725.1.mrna1;Target=FBgn0033725.1 275 304 +
Chr2	stalkie_big_nohaplotig	CDS	10343703	10343877	.	-	0	Parent=FBgn0033725.1.mrna1;Target=FBgn0033725.1 100 274 +
Chr2	stalkie_big_nohaplotig	CDS	10346396	10346494	.	-	0	Parent=FBgn0033725.1.mrna1;Target=FBgn0033725.1 1 99 +
Chr2	stalkie_big_nohaplotig	mRNA	10338643	10338961	.	-	.	ID=comp145877_c0_seq1.mrna1;geneID=comp145877_c0_seq1.path1;Name=comp145877_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=318;mismatches=1;indels=0;unknowns=0;Target=comp145877_c0_seq1 319 1 .;CDS_Target=comp145877_c0_seq1 185 135 .;locus=RLOC_00014703
Chr2	stalkie_big_nohaplotig	exon	10338643	10338961	99	-	.	Parent=comp145877_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10338777	10338827	.	-	0	Parent=comp145877_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10339942	10340953	.	-	.	ID=comp154279_c0_seq1.mrna1;geneID=comp154279_c0_seq1.path1;Name=comp154279_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.0;matches=978;mismatches=34;indels=17;unknowns=0;Target=comp154279_c0_seq1 1029 1 .;CDS_Target=comp154279_c0_seq1 419 309 .;locus=RLOC_00014703
Chr2	stalkie_big_nohaplotig	exon	10339942	10340953	95	-	.	Parent=comp154279_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10340548	10340658	.	-	0	Parent=comp154279_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10341539	10343219	.	-	.	ID=comp160922_c0_seq1.mrna1;geneID=comp160922_c0_seq1.path1;Name=comp160922_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.3;matches=1657;mismatches=21;indels=8;unknowns=0;Target=comp160922_c0_seq1 1683 1 .;CDS_Target=comp160922_c0_seq1 1128 976 .;locus=RLOC_00014703
Chr2	stalkie_big_nohaplotig	exon	10341539	10343219	98	-	.	Parent=comp160922_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10342090	10342242	.	-	0	Parent=comp160922_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10343229	10343725	.	-	.	ID=comp170185_c0_seq1.mrna1;geneID=comp170185_c0_seq1.path1;Name=comp170185_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=493;mismatches=4;indels=0;unknowns=0;Target=comp170185_c0_seq1 497 1 .;CDS_Target=comp170185_c0_seq1 40 2 .;locus=RLOC_00014703
Chr2	stalkie_big_nohaplotig	exon	10343229	10343725	99	-	.	Parent=comp170185_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10343686	10343724	.	-	0	Parent=comp170185_c0_seq1.mrna1
Chr2	gffcl	locus	10363467	10364232	.	+	.	ID=RLOC_00014704;geneIDs=FBgn0033723.1.path1;transcripts=FBgn0033723.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10363467	10364232	.	+	.	ID=FBgn0033723.1.mrna1;geneID=FBgn0033723.1.path1;Name=FBgn0033723.1;Dir=sensecoverage=100.0;identity=99.3;matches=700;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014704
Chr2	stalkie_big_nohaplotig	exon	10363467	10364102	99	+	.	Parent=FBgn0033723.1.mrna1;Target=FBgn0033723.1 1 636 +
Chr2	stalkie_big_nohaplotig	exon	10364164	10364232	100	+	.	Parent=FBgn0033723.1.mrna1;Target=FBgn0033723.1 637 705 +
Chr2	stalkie_big_nohaplotig	CDS	10363467	10364102	.	+	0	Parent=FBgn0033723.1.mrna1;Target=FBgn0033723.1 1 636 +
Chr2	stalkie_big_nohaplotig	CDS	10364164	10364232	.	+	0	Parent=FBgn0033723.1.mrna1;Target=FBgn0033723.1 637 705 +
Chr2	gffcl	locus	10373062	10374671	.	-	.	ID=RLOC_00014705;geneIDs=FBgn0033726.1.path1;transcripts=FBgn0033726.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10373062	10374671	.	-	.	ID=FBgn0033726.1.mrna1;geneID=FBgn0033726.1.path1;Name=FBgn0033726.1;Dir=sensecoverage=100.0;identity=99.6;matches=556;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014705
Chr2	stalkie_big_nohaplotig	exon	10373062	10373132	97	-	.	Parent=FBgn0033726.1.mrna1;Target=FBgn0033726.1 488 558 +
Chr2	stalkie_big_nohaplotig	exon	10373198	10373630	100	-	.	Parent=FBgn0033726.1.mrna1;Target=FBgn0033726.1 55 487 +
Chr2	stalkie_big_nohaplotig	exon	10374618	10374671	100	-	.	Parent=FBgn0033726.1.mrna1;Target=FBgn0033726.1 1 54 +
Chr2	stalkie_big_nohaplotig	CDS	10373062	10373132	.	-	2	Parent=FBgn0033726.1.mrna1;Target=FBgn0033726.1 488 558 +
Chr2	stalkie_big_nohaplotig	CDS	10373198	10373630	.	-	0	Parent=FBgn0033726.1.mrna1;Target=FBgn0033726.1 55 487 +
Chr2	stalkie_big_nohaplotig	CDS	10374618	10374671	.	-	0	Parent=FBgn0033726.1.mrna1;Target=FBgn0033726.1 1 54 +
Chr2	gffcl	locus	10427027	10427361	.	-	.	ID=RLOC_00014706;geneIDs=comp142690_c0_seq1.path1;transcripts=comp142690_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10427027	10427361	.	-	.	ID=comp142690_c0_seq1.mrna1;geneID=comp142690_c0_seq1.path1;Name=comp142690_c0_seq1;Dir=indeterminatecoverage=97.1;identity=98.5;matches=330;mismatches=5;indels=0;unknowns=0;Target=comp142690_c0_seq1 345 11 .;CDS_Target=comp142690_c0_seq1 104 12 .;locus=RLOC_00014706
Chr2	stalkie_big_nohaplotig	exon	10427027	10427361	98	-	.	Parent=comp142690_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10427268	10427360	.	-	0	Parent=comp142690_c0_seq1.mrna1
Chr2	gffcl	locus	10442489	10443496	.	-	.	ID=RLOC_00014707;geneIDs=FBgn0050042.1.path1;transcripts=FBgn0050042.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10442489	10443496	.	-	.	ID=FBgn0050042.1.mrna1;geneID=FBgn0050042.1.path1;Name=FBgn0050042.1;Dir=sensecoverage=100.0;identity=99.9;matches=818;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014707
Chr2	stalkie_big_nohaplotig	exon	10442489	10442726	100	-	.	Parent=FBgn0050042.1.mrna1;Target=FBgn0050042.1 582 819 +
Chr2	stalkie_big_nohaplotig	exon	10442853	10443370	99	-	.	Parent=FBgn0050042.1.mrna1;Target=FBgn0050042.1 64 581 +
Chr2	stalkie_big_nohaplotig	exon	10443434	10443496	100	-	.	Parent=FBgn0050042.1.mrna1;Target=FBgn0050042.1 1 63 +
Chr2	stalkie_big_nohaplotig	CDS	10442489	10442726	.	-	1	Parent=FBgn0050042.1.mrna1;Target=FBgn0050042.1 582 819 +
Chr2	stalkie_big_nohaplotig	CDS	10442853	10443370	.	-	0	Parent=FBgn0050042.1.mrna1;Target=FBgn0050042.1 64 581 +
Chr2	stalkie_big_nohaplotig	CDS	10443434	10443496	.	-	0	Parent=FBgn0050042.1.mrna1;Target=FBgn0050042.1 1 63 +
Chr2	gffcl	locus	10449183	10451899	.	-	.	ID=RLOC_00014708;geneIDs=FBgn0050045.1.path1,comp143441_c0_seq1.path1;transcripts=FBgn0050045.1.mrna1,comp143441_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10449183	10451899	.	-	.	ID=FBgn0050045.1.mrna1;geneID=FBgn0050045.1.path1;Name=FBgn0050045.1;Dir=sensecoverage=100.0;identity=99.8;matches=461;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014708
Chr2	stalkie_big_nohaplotig	exon	10449183	10449389	99	-	.	Parent=FBgn0050045.1.mrna1;Target=FBgn0050045.1 256 462 +
Chr2	stalkie_big_nohaplotig	exon	10449896	10450093	100	-	.	Parent=FBgn0050045.1.mrna1;Target=FBgn0050045.1 58 255 +
Chr2	stalkie_big_nohaplotig	exon	10451843	10451899	100	-	.	Parent=FBgn0050045.1.mrna1;Target=FBgn0050045.1 1 57 +
Chr2	stalkie_big_nohaplotig	CDS	10449183	10449389	.	-	0	Parent=FBgn0050045.1.mrna1;Target=FBgn0050045.1 256 462 +
Chr2	stalkie_big_nohaplotig	CDS	10449896	10450093	.	-	0	Parent=FBgn0050045.1.mrna1;Target=FBgn0050045.1 58 255 +
Chr2	stalkie_big_nohaplotig	CDS	10451843	10451899	.	-	0	Parent=FBgn0050045.1.mrna1;Target=FBgn0050045.1 1 57 +
Chr2	stalkie_big_nohaplotig	mRNA	10449430	10449919	.	-	.	ID=comp143441_c0_seq1.mrna1;geneID=comp143441_c0_seq1.path1;Name=comp143441_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=481;mismatches=9;indels=0;unknowns=0;Target=comp143441_c0_seq1 490 1 .;CDS_Target=comp143441_c0_seq1 347 138 .;locus=RLOC_00014708
Chr2	stalkie_big_nohaplotig	exon	10449430	10449919	98	-	.	Parent=comp143441_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10449573	10449782	.	-	0	Parent=comp143441_c0_seq1.mrna1
Chr2	gffcl	locus	10456607	10457012	.	-	.	ID=RLOC_00014709;geneIDs=comp152344_c1_seq1.path1;transcripts=comp152344_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10456607	10457012	.	-	.	ID=comp152344_c1_seq1.mrna1;geneID=comp152344_c1_seq1.path1;Name=comp152344_c1_seq1;Dir=indeterminatecoverage=87.9;identity=99.0;matches=402;mismatches=4;indels=0;unknowns=0;Target=comp152344_c1_seq1 418 13 .;CDS_Target=comp152344_c1_seq1 252 13 .;locus=RLOC_00014709
Chr2	stalkie_big_nohaplotig	exon	10456607	10457012	99	-	.	Parent=comp152344_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10456773	10457012	.	-	0	Parent=comp152344_c1_seq1.mrna1
Chr2	gffcl	locus	10462215	10462604	.	+	.	ID=RLOC_00014710;geneIDs=FBgn0025578.1.path1;transcripts=FBgn0025578.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10462215	10462604	.	+	.	ID=FBgn0025578.1.mrna1;geneID=FBgn0025578.1.path1;Name=FBgn0025578.1;Dir=sensecoverage=100.0;identity=99.7;matches=320;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014710
Chr2	stalkie_big_nohaplotig	exon	10462215	10462274	100	+	.	Parent=FBgn0025578.1.mrna1;Target=FBgn0025578.1 1 60 +
Chr2	stalkie_big_nohaplotig	exon	10462344	10462604	99	+	.	Parent=FBgn0025578.1.mrna1;Target=FBgn0025578.1 61 321 +
Chr2	stalkie_big_nohaplotig	CDS	10462215	10462274	.	+	0	Parent=FBgn0025578.1.mrna1;Target=FBgn0025578.1 1 60 +
Chr2	stalkie_big_nohaplotig	CDS	10462344	10462604	.	+	0	Parent=FBgn0025578.1.mrna1;Target=FBgn0025578.1 61 321 +
Chr2	gffcl	locus	10464816	10465310	.	.	.	ID=RLOC_00014711;geneIDs=Dv_FBgn0202211.1.path1,comp152344_c1_seq1.path2;transcripts=Dv_FBgn0202211.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10464816	10465308	.	-	.	ID=Dv_FBgn0202211.1.mrna1;geneID=Dv_FBgn0202211.1.path1;Name=Dv_FBgn0202211.1;Dir=sensecoverage=100.0;identity=97.9;matches=376;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014711
Chr2	stalkie_big_nohaplotig	exon	10464816	10465157	97	-	.	Parent=Dv_FBgn0202211.1.mrna1;Target=Dv_FBgn0202211.1 43 384 +
Chr2	stalkie_big_nohaplotig	exon	10465267	10465308	100	-	.	Parent=Dv_FBgn0202211.1.mrna1;Target=Dv_FBgn0202211.1 1 42 +
Chr2	stalkie_big_nohaplotig	CDS	10464816	10465157	.	-	0	Parent=Dv_FBgn0202211.1.mrna1;Target=Dv_FBgn0202211.1 43 384 +
Chr2	stalkie_big_nohaplotig	CDS	10465267	10465308	.	-	0	Parent=Dv_FBgn0202211.1.mrna1;Target=Dv_FBgn0202211.1 1 42 +
Chr2	gffcl	locus	10477810	10478733	.	-	.	ID=RLOC_00014712;geneIDs=comp151999_c1_seq1.path1;transcripts=comp151999_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10477810	10478733	.	-	.	ID=comp151999_c1_seq1.mrna1;geneID=comp151999_c1_seq1.path1;Name=comp151999_c1_seq1;Dir=sensecoverage=99.8;identity=98.1;matches=763;mismatches=14;indels=1;unknowns=0;Target=comp151999_c1_seq1 383 496 +;locus=RLOC_00014712
Chr2	stalkie_big_nohaplotig	exon	10477810	10478031	98	-	.	Parent=comp151999_c1_seq1.mrna1;Target=comp151999_c1_seq1 602 823 +
Chr2	stalkie_big_nohaplotig	exon	10478034	10478223	97	-	.	Parent=comp151999_c1_seq1.mrna1;Target=comp151999_c1_seq1 368 556 +
Chr2	stalkie_big_nohaplotig	exon	10478368	10478733	97	-	.	Parent=comp151999_c1_seq1.mrna1;Target=comp151999_c1_seq1 2 367 +
Chr2	stalkie_big_nohaplotig	CDS	10478095	10478208	.	-	0	Parent=comp151999_c1_seq1.mrna1
Chr2	gffcl	locus	10491918	10492826	.	-	.	ID=RLOC_00014713;geneIDs=comp59882_c0_seq1.path1;transcripts=comp59882_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10491918	10492826	.	-	.	ID=comp59882_c0_seq1.mrna1;geneID=comp59882_c0_seq1.path1;Name=comp59882_c0_seq1;Dir=antisensecoverage=99.7;identity=99.7;matches=717;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014713
Chr2	stalkie_big_nohaplotig	exon	10491918	10492280	99	-	.	Parent=comp59882_c0_seq1.mrna1;Target=comp59882_c0_seq1 3 365 -
Chr2	stalkie_big_nohaplotig	exon	10492408	10492468	100	-	.	Parent=comp59882_c0_seq1.mrna1;Target=comp59882_c0_seq1 366 426 -
Chr2	stalkie_big_nohaplotig	exon	10492532	10492826	99	-	.	Parent=comp59882_c0_seq1.mrna1;Target=comp59882_c0_seq1 427 721 -
Chr2	stalkie_big_nohaplotig	CDS	10492137	10492280	.	-	0	Parent=comp59882_c0_seq1.mrna1;Target=comp59882_c0_seq1 222 365 .
Chr2	stalkie_big_nohaplotig	CDS	10492408	10492468	.	-	1	Parent=comp59882_c0_seq1.mrna1;Target=comp59882_c0_seq1 366 426 .
Chr2	stalkie_big_nohaplotig	CDS	10492532	10492608	.	-	0	Parent=comp59882_c0_seq1.mrna1;Target=comp59882_c0_seq1 427 503 .
Chr2	gffcl	locus	10590204	10602780	.	+	.	ID=RLOC_00014715;geneIDs=FBgn0082585.1.path1;transcripts=FBgn0082585.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10590204	10602780	.	+	.	ID=FBgn0082585.1.mrna1;geneID=FBgn0082585.1.path1;Name=FBgn0082585.1;Dir=sensecoverage=100.0;identity=99.8;matches=1842;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014715
Chr2	stalkie_big_nohaplotig	exon	10590204	10590290	100	+	.	Parent=FBgn0082585.1.mrna1;Target=FBgn0082585.1 1 87 +
Chr2	stalkie_big_nohaplotig	exon	10600843	10601237	99	+	.	Parent=FBgn0082585.1.mrna1;Target=FBgn0082585.1 88 482 +
Chr2	stalkie_big_nohaplotig	exon	10601301	10601444	100	+	.	Parent=FBgn0082585.1.mrna1;Target=FBgn0082585.1 483 626 +
Chr2	stalkie_big_nohaplotig	exon	10601503	10602354	100	+	.	Parent=FBgn0082585.1.mrna1;Target=FBgn0082585.1 627 1478 +
Chr2	stalkie_big_nohaplotig	exon	10602414	10602780	100	+	.	Parent=FBgn0082585.1.mrna1;Target=FBgn0082585.1 1479 1845 +
Chr2	stalkie_big_nohaplotig	CDS	10590204	10590290	.	+	0	Parent=FBgn0082585.1.mrna1;Target=FBgn0082585.1 1 87 +
Chr2	stalkie_big_nohaplotig	CDS	10600843	10601237	.	+	0	Parent=FBgn0082585.1.mrna1;Target=FBgn0082585.1 88 482 +
Chr2	stalkie_big_nohaplotig	CDS	10601301	10601444	.	+	1	Parent=FBgn0082585.1.mrna1;Target=FBgn0082585.1 483 626 +
Chr2	stalkie_big_nohaplotig	CDS	10601503	10602354	.	+	1	Parent=FBgn0082585.1.mrna1;Target=FBgn0082585.1 627 1478 +
Chr2	stalkie_big_nohaplotig	CDS	10602414	10602780	.	+	1	Parent=FBgn0082585.1.mrna1;Target=FBgn0082585.1 1479 1845 +
Chr2	gffcl	locus	10596766	10599343	.	+	.	ID=RLOC_00014716;geneIDs=FBgn0050022.1.path1;transcripts=FBgn0050022.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10596766	10599343	.	+	.	ID=FBgn0050022.1.mrna1;geneID=FBgn0050022.1.path1;Name=FBgn0050022.1;Dir=sensecoverage=100.0;identity=100.0;matches=879;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014716
Chr2	stalkie_big_nohaplotig	exon	10596766	10596960	100	+	.	Parent=FBgn0050022.1.mrna1;Target=FBgn0050022.1 1 195 +
Chr2	stalkie_big_nohaplotig	exon	10597155	10597299	100	+	.	Parent=FBgn0050022.1.mrna1;Target=FBgn0050022.1 196 340 +
Chr2	stalkie_big_nohaplotig	exon	10598516	10598882	100	+	.	Parent=FBgn0050022.1.mrna1;Target=FBgn0050022.1 341 707 +
Chr2	stalkie_big_nohaplotig	exon	10598943	10599061	100	+	.	Parent=FBgn0050022.1.mrna1;Target=FBgn0050022.1 708 826 +
Chr2	stalkie_big_nohaplotig	exon	10599291	10599343	100	+	.	Parent=FBgn0050022.1.mrna1;Target=FBgn0050022.1 827 879 +
Chr2	stalkie_big_nohaplotig	CDS	10596766	10596960	.	+	0	Parent=FBgn0050022.1.mrna1;Target=FBgn0050022.1 1 195 +
Chr2	stalkie_big_nohaplotig	CDS	10597155	10597299	.	+	0	Parent=FBgn0050022.1.mrna1;Target=FBgn0050022.1 196 340 +
Chr2	stalkie_big_nohaplotig	CDS	10598516	10598882	.	+	2	Parent=FBgn0050022.1.mrna1;Target=FBgn0050022.1 341 707 +
Chr2	stalkie_big_nohaplotig	CDS	10598943	10599061	.	+	1	Parent=FBgn0050022.1.mrna1;Target=FBgn0050022.1 708 826 +
Chr2	stalkie_big_nohaplotig	CDS	10599291	10599343	.	+	2	Parent=FBgn0050022.1.mrna1;Target=FBgn0050022.1 827 879 +
Chr2	gffcl	locus	10610954	10612006	.	+	.	ID=RLOC_00014717;geneIDs=comp152603_c0_seq1.path1;transcripts=comp152603_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10610954	10612006	.	+	.	ID=comp152603_c0_seq1.mrna1;geneID=comp152603_c0_seq1.path1;Name=comp152603_c0_seq1;Dir=antisensecoverage=100.0;identity=92.9;matches=900;mismatches=28;indels=41;unknowns=0;Target=comp152603_c0_seq1 431 583 .;locus=RLOC_00014717
Chr2	stalkie_big_nohaplotig	exon	10610954	10611734	91	+	.	Parent=comp152603_c0_seq1.mrna1;Target=comp152603_c0_seq1 184 933 -
Chr2	stalkie_big_nohaplotig	exon	10611824	10612006	97	+	.	Parent=comp152603_c0_seq1.mrna1;Target=comp152603_c0_seq1 1 183 -
Chr2	stalkie_big_nohaplotig	CDS	10611308	10611457	.	+	0	Parent=comp152603_c0_seq1.mrna1
Chr2	gffcl	locus	10614615	10621905	.	.	.	ID=RLOC_00014718;geneIDs=FBgn0033631.1.path1,comp161331_c0_seq1.path1;transcripts=FBgn0033631.1.mrna1,comp161331_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10614615	10621816	.	+	.	ID=FBgn0033631.1.mrna1;geneID=FBgn0033631.1.path1;Name=FBgn0033631.1;Dir=sensecoverage=100.0;identity=100.0;matches=654;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014718
Chr2	stalkie_big_nohaplotig	exon	10614615	10614689	100	+	.	Parent=FBgn0033631.1.mrna1;Target=FBgn0033631.1 1 75 +
Chr2	stalkie_big_nohaplotig	exon	10614765	10614986	100	+	.	Parent=FBgn0033631.1.mrna1;Target=FBgn0033631.1 76 297 +
Chr2	stalkie_big_nohaplotig	exon	10618028	10618278	100	+	.	Parent=FBgn0033631.1.mrna1;Target=FBgn0033631.1 298 548 +
Chr2	stalkie_big_nohaplotig	exon	10621711	10621816	100	+	.	Parent=FBgn0033631.1.mrna1;Target=FBgn0033631.1 549 654 +
Chr2	stalkie_big_nohaplotig	CDS	10614615	10614689	.	+	0	Parent=FBgn0033631.1.mrna1;Target=FBgn0033631.1 1 75 +
Chr2	stalkie_big_nohaplotig	CDS	10614765	10614986	.	+	0	Parent=FBgn0033631.1.mrna1;Target=FBgn0033631.1 76 297 +
Chr2	stalkie_big_nohaplotig	CDS	10618028	10618278	.	+	0	Parent=FBgn0033631.1.mrna1;Target=FBgn0033631.1 298 548 +
Chr2	stalkie_big_nohaplotig	CDS	10621711	10621816	.	+	1	Parent=FBgn0033631.1.mrna1;Target=FBgn0033631.1 549 654 +
Chr2	stalkie_big_nohaplotig	mRNA	10619746	10621905	.	-	.	ID=comp161331_c0_seq1.mrna1;geneID=comp161331_c0_seq1.path1;Name=comp161331_c0_seq1;Dir=indeterminatecoverage=99.6;identity=97.4;matches=2114;mismatches=34;indels=22;unknowns=0;Target=comp161331_c0_seq1 2167 10 .;CDS_Target=comp161331_c0_seq1 1929 1762 .;locus=RLOC_00014718
Chr2	stalkie_big_nohaplotig	exon	10619746	10621905	97	-	.	Parent=comp161331_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10619984	10620151	.	-	0	Parent=comp161331_c0_seq1.mrna1
Chr2	gffcl	locus	10618613	10619313	.	-	.	ID=RLOC_00014719;geneIDs=comp153080_c0_seq1.path1;transcripts=comp153080_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10618613	10619313	.	-	.	ID=comp153080_c0_seq1.mrna1;geneID=comp153080_c0_seq1.path1;Name=comp153080_c0_seq1;Dir=indeterminatecoverage=93.4;identity=98.8;matches=634;mismatches=4;indels=4;unknowns=0;Target=comp153080_c0_seq1 441 307 .;locus=RLOC_00014719
Chr2	stalkie_big_nohaplotig	exon	10618613	10619137	99	-	.	Parent=comp153080_c0_seq1.mrna1;Target=comp153080_c0_seq1 687 161 .
Chr2	stalkie_big_nohaplotig	exon	10619201	10619313	96	-	.	Parent=comp153080_c0_seq1.mrna1;Target=comp153080_c0_seq1 160 46 .
Chr2	stalkie_big_nohaplotig	CDS	10618857	10618991	.	-	0	Parent=comp153080_c0_seq1.mrna1
Chr2	gffcl	locus	10626396	10627475	.	+	.	ID=RLOC_00014720;geneIDs=FBgn0031491.2.path1;transcripts=FBgn0031491.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10626396	10627475	.	+	.	ID=FBgn0031491.2.mrna1;geneID=FBgn0031491.2.path1;Name=FBgn0031491.2;Dir=sensecoverage=100.0;identity=99.8;matches=808;mismatches=1;indels=1;unknowns=0;Target=FBgn0031491.2 3 140 +;locus=RLOC_00014720
Chr2	stalkie_big_nohaplotig	exon	10626396	10626624	99	+	.	Parent=FBgn0031491.2.mrna1;Target=FBgn0031491.2 1 230 +
Chr2	stalkie_big_nohaplotig	exon	10626896	10627475	99	+	.	Parent=FBgn0031491.2.mrna1;Target=FBgn0031491.2 231 810 +
Chr2	stalkie_big_nohaplotig	CDS	10626398	10626534	.	+	0	Parent=FBgn0031491.2.mrna1
Chr2	gffcl	locus	10632804	10636530	.	+	.	ID=RLOC_00014721;geneIDs=FBgn0033629.1.path1;transcripts=FBgn0033629.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10632804	10636530	.	+	.	ID=FBgn0033629.1.mrna1;geneID=FBgn0033629.1.path1;Name=FBgn0033629.1;Dir=sensecoverage=100.0;identity=99.6;matches=726;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014721
Chr2	stalkie_big_nohaplotig	exon	10632804	10632878	100	+	.	Parent=FBgn0033629.1.mrna1;Target=FBgn0033629.1 1 75 +
Chr2	stalkie_big_nohaplotig	exon	10635706	10635894	100	+	.	Parent=FBgn0033629.1.mrna1;Target=FBgn0033629.1 76 264 +
Chr2	stalkie_big_nohaplotig	exon	10635974	10636291	99	+	.	Parent=FBgn0033629.1.mrna1;Target=FBgn0033629.1 265 582 +
Chr2	stalkie_big_nohaplotig	exon	10636384	10636530	99	+	.	Parent=FBgn0033629.1.mrna1;Target=FBgn0033629.1 583 729 +
Chr2	stalkie_big_nohaplotig	CDS	10632804	10632878	.	+	0	Parent=FBgn0033629.1.mrna1;Target=FBgn0033629.1 1 75 +
Chr2	stalkie_big_nohaplotig	CDS	10635706	10635894	.	+	0	Parent=FBgn0033629.1.mrna1;Target=FBgn0033629.1 76 264 +
Chr2	stalkie_big_nohaplotig	CDS	10635974	10636291	.	+	0	Parent=FBgn0033629.1.mrna1;Target=FBgn0033629.1 265 582 +
Chr2	stalkie_big_nohaplotig	CDS	10636384	10636530	.	+	0	Parent=FBgn0033629.1.mrna1;Target=FBgn0033629.1 583 729 +
Chr2	gffcl	locus	10638702	10639154	.	+	.	ID=RLOC_00014722;geneIDs=FBgn0033480.1.path1;transcripts=FBgn0033480.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10638702	10639154	.	+	.	ID=FBgn0033480.1.mrna1;geneID=FBgn0033480.1.path1;Name=FBgn0033480.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=453;mismatches=0;indels=0;unknowns=0;Target=FBgn0033480.1 453 1 .;locus=RLOC_00014722
Chr2	stalkie_big_nohaplotig	exon	10638702	10639154	100	+	.	Parent=FBgn0033480.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10638702	10639154	.	+	0	Parent=FBgn0033480.1.mrna1
Chr2	gffcl	locus	10639247	10640767	.	-	.	ID=RLOC_00014723;geneIDs=FBgn0013435.1.path1;transcripts=FBgn0013435.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10639247	10640767	.	-	.	ID=FBgn0013435.1.mrna1;geneID=FBgn0013435.1.path1;Name=FBgn0013435.1;Dir=sensecoverage=100.0;identity=99.3;matches=1162;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014723
Chr2	stalkie_big_nohaplotig	exon	10639247	10639392	100	-	.	Parent=FBgn0013435.1.mrna1;Target=FBgn0013435.1 1025 1170 +
Chr2	stalkie_big_nohaplotig	exon	10639457	10639903	99	-	.	Parent=FBgn0013435.1.mrna1;Target=FBgn0013435.1 578 1024 +
Chr2	stalkie_big_nohaplotig	exon	10639962	10640164	97	-	.	Parent=FBgn0013435.1.mrna1;Target=FBgn0013435.1 375 577 +
Chr2	stalkie_big_nohaplotig	exon	10640218	10640392	100	-	.	Parent=FBgn0013435.1.mrna1;Target=FBgn0013435.1 200 374 +
Chr2	stalkie_big_nohaplotig	exon	10640451	10640523	98	-	.	Parent=FBgn0013435.1.mrna1;Target=FBgn0013435.1 127 199 +
Chr2	stalkie_big_nohaplotig	exon	10640586	10640686	99	-	.	Parent=FBgn0013435.1.mrna1;Target=FBgn0013435.1 26 126 +
Chr2	stalkie_big_nohaplotig	exon	10640743	10640767	100	-	.	Parent=FBgn0013435.1.mrna1;Target=FBgn0013435.1 1 25 +
Chr2	stalkie_big_nohaplotig	CDS	10639247	10639392	.	-	2	Parent=FBgn0013435.1.mrna1;Target=FBgn0013435.1 1025 1170 +
Chr2	stalkie_big_nohaplotig	CDS	10639457	10639903	.	-	2	Parent=FBgn0013435.1.mrna1;Target=FBgn0013435.1 578 1024 +
Chr2	stalkie_big_nohaplotig	CDS	10639962	10640164	.	-	1	Parent=FBgn0013435.1.mrna1;Target=FBgn0013435.1 375 577 +
Chr2	stalkie_big_nohaplotig	CDS	10640218	10640392	.	-	2	Parent=FBgn0013435.1.mrna1;Target=FBgn0013435.1 200 374 +
Chr2	stalkie_big_nohaplotig	CDS	10640451	10640523	.	-	0	Parent=FBgn0013435.1.mrna1;Target=FBgn0013435.1 127 199 +
Chr2	stalkie_big_nohaplotig	CDS	10640586	10640686	.	-	2	Parent=FBgn0013435.1.mrna1;Target=FBgn0013435.1 26 126 +
Chr2	stalkie_big_nohaplotig	CDS	10640743	10640767	.	-	0	Parent=FBgn0013435.1.mrna1;Target=FBgn0013435.1 1 25 +
Chr2	gffcl	locus	10641705	10644543	.	+	.	ID=RLOC_00014724;geneIDs=FBgn0033740.1.path1;transcripts=FBgn0033740.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10641705	10644543	.	+	.	ID=FBgn0033740.1.mrna1;geneID=FBgn0033740.1.path1;Name=FBgn0033740.1;Dir=sensecoverage=100.0;identity=99.7;matches=2051;mismatches=7;indels=0;unknowns=0;locus=RLOC_00014724
Chr2	stalkie_big_nohaplotig	exon	10641705	10641817	100	+	.	Parent=FBgn0033740.1.mrna1;Target=FBgn0033740.1 1 113 +
Chr2	stalkie_big_nohaplotig	exon	10641878	10642016	100	+	.	Parent=FBgn0033740.1.mrna1;Target=FBgn0033740.1 114 252 +
Chr2	stalkie_big_nohaplotig	exon	10642079	10642223	100	+	.	Parent=FBgn0033740.1.mrna1;Target=FBgn0033740.1 253 397 +
Chr2	stalkie_big_nohaplotig	exon	10642629	10642880	99	+	.	Parent=FBgn0033740.1.mrna1;Target=FBgn0033740.1 398 649 +
Chr2	stalkie_big_nohaplotig	exon	10642945	10643453	99	+	.	Parent=FBgn0033740.1.mrna1;Target=FBgn0033740.1 650 1158 +
Chr2	stalkie_big_nohaplotig	exon	10643518	10643972	99	+	.	Parent=FBgn0033740.1.mrna1;Target=FBgn0033740.1 1159 1613 +
Chr2	stalkie_big_nohaplotig	exon	10644033	10644220	100	+	.	Parent=FBgn0033740.1.mrna1;Target=FBgn0033740.1 1614 1801 +
Chr2	stalkie_big_nohaplotig	exon	10644287	10644543	100	+	.	Parent=FBgn0033740.1.mrna1;Target=FBgn0033740.1 1802 2058 +
Chr2	stalkie_big_nohaplotig	CDS	10641705	10641817	.	+	0	Parent=FBgn0033740.1.mrna1;Target=FBgn0033740.1 1 113 +
Chr2	stalkie_big_nohaplotig	CDS	10641878	10642016	.	+	1	Parent=FBgn0033740.1.mrna1;Target=FBgn0033740.1 114 252 +
Chr2	stalkie_big_nohaplotig	CDS	10642079	10642223	.	+	0	Parent=FBgn0033740.1.mrna1;Target=FBgn0033740.1 253 397 +
Chr2	stalkie_big_nohaplotig	CDS	10642629	10642880	.	+	2	Parent=FBgn0033740.1.mrna1;Target=FBgn0033740.1 398 649 +
Chr2	stalkie_big_nohaplotig	CDS	10642945	10643453	.	+	2	Parent=FBgn0033740.1.mrna1;Target=FBgn0033740.1 650 1158 +
Chr2	stalkie_big_nohaplotig	CDS	10643518	10643972	.	+	0	Parent=FBgn0033740.1.mrna1;Target=FBgn0033740.1 1159 1613 +
Chr2	stalkie_big_nohaplotig	CDS	10644033	10644220	.	+	1	Parent=FBgn0033740.1.mrna1;Target=FBgn0033740.1 1614 1801 +
Chr2	stalkie_big_nohaplotig	CDS	10644287	10644543	.	+	2	Parent=FBgn0033740.1.mrna1;Target=FBgn0033740.1 1802 2058 +
Chr2	gffcl	locus	10645030	10645660	.	+	.	ID=RLOC_00014725;geneIDs=comp153405_c1_seq1.path1;transcripts=comp153405_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10645030	10645660	.	+	.	ID=comp153405_c1_seq1.mrna1;geneID=comp153405_c1_seq1.path1;Name=comp153405_c1_seq1;Dir=indeterminatecoverage=99.8;identity=96.6;matches=622;mismatches=2;indels=20;unknowns=0;Target=comp153405_c1_seq1 638 2 .;CDS_Target=comp153405_c1_seq1 65 3 .;locus=RLOC_00014725
Chr2	stalkie_big_nohaplotig	exon	10645030	10645660	96	+	.	Parent=comp153405_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10645031	10645081	.	+	0	Parent=comp153405_c1_seq1.mrna1
Chr2	gffcl	locus	10646661	10690589	.	-	.	ID=RLOC_00014726;geneIDs=FBgn0010238.1.path1;transcripts=FBgn0010238.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10646661	10690589	.	-	.	ID=FBgn0010238.1.mrna1;geneID=FBgn0010238.1.path1;Name=FBgn0010238.1;Dir=sensecoverage=100.0;identity=99.7;matches=1107;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014726
Chr2	stalkie_big_nohaplotig	exon	10646661	10647199	99	-	.	Parent=FBgn0010238.1.mrna1;Target=FBgn0010238.1 572 1110 +
Chr2	stalkie_big_nohaplotig	exon	10690019	10690589	100	-	.	Parent=FBgn0010238.1.mrna1;Target=FBgn0010238.1 1 571 +
Chr2	stalkie_big_nohaplotig	CDS	10646661	10647199	.	-	2	Parent=FBgn0010238.1.mrna1;Target=FBgn0010238.1 572 1110 +
Chr2	stalkie_big_nohaplotig	CDS	10690019	10690589	.	-	0	Parent=FBgn0010238.1.mrna1;Target=FBgn0010238.1 1 571 +
Chr2	gffcl	locus	10653257	11176124	.	.	.	ID=RLOC_00014727;geneIDs=comp147683_c1_seq1.path1,comp147683_c1_seq1.path2;transcripts=comp147683_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10653257	11176124	.	-	.	ID=comp147683_c1_seq1.mrna1;geneID=comp147683_c1_seq1.path1;Name=comp147683_c1_seq1;Dir=indeterminatecoverage=67.4;identity=99.6;matches=249;mismatches=1;indels=0;unknowns=0;Target=comp147683_c1_seq1 75 16 .;locus=RLOC_00014727
Chr2	stalkie_big_nohaplotig	exon	10653257	10653266	100	-	.	Parent=comp147683_c1_seq1.mrna1;Target=comp147683_c1_seq1 298 289 .
Chr2	stalkie_big_nohaplotig	exon	10655830	10655833	100	-	.	Parent=comp147683_c1_seq1.mrna1;Target=comp147683_c1_seq1 288 285 .
Chr2	stalkie_big_nohaplotig	exon	10659522	10659527	100	-	.	Parent=comp147683_c1_seq1.mrna1;Target=comp147683_c1_seq1 284 279 .
Chr2	stalkie_big_nohaplotig	exon	10661980	10661982	100	-	.	Parent=comp147683_c1_seq1.mrna1;Target=comp147683_c1_seq1 278 276 .
Chr2	stalkie_big_nohaplotig	exon	10672535	10672536	100	-	.	Parent=comp147683_c1_seq1.mrna1;Target=comp147683_c1_seq1 275 274 .
Chr2	stalkie_big_nohaplotig	exon	10677205	10677208	100	-	.	Parent=comp147683_c1_seq1.mrna1;Target=comp147683_c1_seq1 273 270 .
Chr2	stalkie_big_nohaplotig	exon	10677238	10677247	100	-	.	Parent=comp147683_c1_seq1.mrna1;Target=comp147683_c1_seq1 234 225 .
Chr2	stalkie_big_nohaplotig	exon	10684348	10684351	100	-	.	Parent=comp147683_c1_seq1.mrna1;Target=comp147683_c1_seq1 224 221 .
Chr2	stalkie_big_nohaplotig	exon	10688845	10688852	100	-	.	Parent=comp147683_c1_seq1.mrna1;Target=comp147683_c1_seq1 220 213 .
Chr2	stalkie_big_nohaplotig	exon	10691291	10691293	100	-	.	Parent=comp147683_c1_seq1.mrna1;Target=comp147683_c1_seq1 212 210 .
Chr2	stalkie_big_nohaplotig	exon	11175929	11176124	99	-	.	Parent=comp147683_c1_seq1.mrna1;Target=comp147683_c1_seq1 209 14 .
Chr2	stalkie_big_nohaplotig	CDS	11176063	11176122	.	-	0	Parent=comp147683_c1_seq1.mrna1
Chr2	gffcl	locus	10657573	10658620	.	+	.	ID=RLOC_00014728;geneIDs=comp145638_c1_seq1.path1;transcripts=comp145638_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10657573	10658620	.	+	.	ID=comp145638_c1_seq1.mrna1;geneID=comp145638_c1_seq1.path1;Name=comp145638_c1_seq1;Dir=sensecoverage=97.6;identity=99.1;matches=900;mismatches=8;indels=0;unknowns=0;Target=comp145638_c1_seq1 199 279 +;locus=RLOC_00014728
Chr2	stalkie_big_nohaplotig	exon	10657573	10658013	99	+	.	Parent=comp145638_c1_seq1.mrna1;Target=comp145638_c1_seq1 22 462 +
Chr2	stalkie_big_nohaplotig	exon	10658154	10658620	98	+	.	Parent=comp145638_c1_seq1.mrna1;Target=comp145638_c1_seq1 463 929 +
Chr2	stalkie_big_nohaplotig	CDS	10657750	10657830	.	+	0	Parent=comp145638_c1_seq1.mrna1
Chr2	gffcl	locus	10671718	10672317	.	-	.	ID=RLOC_00014729;geneIDs=comp151147_c0_seq1.path1;transcripts=comp151147_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10671718	10672317	.	-	.	ID=comp151147_c0_seq1.mrna1;geneID=comp151147_c0_seq1.path1;Name=comp151147_c0_seq1;Dir=indeterminatecoverage=99.3;identity=97.9;matches=592;mismatches=3;indels=10;unknowns=0;Target=comp151147_c0_seq1 604 5 .;CDS_Target=comp151147_c0_seq1 186 76 .;locus=RLOC_00014729
Chr2	stalkie_big_nohaplotig	exon	10671718	10672317	97	-	.	Parent=comp151147_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10672136	10672246	.	-	0	Parent=comp151147_c0_seq1.mrna1
Chr2	gffcl	locus	10678071	10679118	.	+	.	ID=RLOC_00014730;geneIDs=comp145638_c1_seq1.path2;transcripts=comp145638_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	10678071	10679118	.	+	.	ID=comp145638_c1_seq1.mrna2;geneID=comp145638_c1_seq1.path2;Name=comp145638_c1_seq1;Dir=sensecoverage=97.6;identity=99.1;matches=900;mismatches=8;indels=0;unknowns=0;Target=comp145638_c1_seq1 199 279 +;locus=RLOC_00014730
Chr2	stalkie_big_nohaplotig	exon	10678071	10678511	99	+	.	Parent=comp145638_c1_seq1.mrna2;Target=comp145638_c1_seq1 22 462 +
Chr2	stalkie_big_nohaplotig	exon	10678652	10679118	98	+	.	Parent=comp145638_c1_seq1.mrna2;Target=comp145638_c1_seq1 463 929 +
Chr2	stalkie_big_nohaplotig	CDS	10678248	10678328	.	+	0	Parent=comp145638_c1_seq1.mrna2
Chr2	gffcl	locus	10691467	10692762	.	-	.	ID=RLOC_00014731;geneIDs=ORF1093.path1;transcripts=ORF1093.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10691467	10692762	.	-	.	ID=ORF1093.mrna1;geneID=ORF1093.path1;Name=ORF1093;Dir=sensecoverage=100.0;identity=99.2;matches=1229;mismatches=7;indels=3;unknowns=0;locus=RLOC_00014731
Chr2	stalkie_big_nohaplotig	exon	10691467	10692668	99	-	.	Parent=ORF1093.mrna1;Target=ORF1093 35 1239 +
Chr2	stalkie_big_nohaplotig	exon	10692729	10692762	100	-	.	Parent=ORF1093.mrna1;Target=ORF1093 1 34 +
Chr2	stalkie_big_nohaplotig	CDS	10691467	10692668	.	-	2	Parent=ORF1093.mrna1;Target=ORF1093 35 1239 +
Chr2	stalkie_big_nohaplotig	CDS	10692729	10692762	.	-	0	Parent=ORF1093.mrna1;Target=ORF1093 1 34 +
Chr2	gffcl	locus	10693639	10695343	.	+	.	ID=RLOC_00014732;geneIDs=FBgn0050392.1.path1;transcripts=FBgn0050392.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10693639	10695343	.	+	.	ID=FBgn0050392.1.mrna1;geneID=FBgn0050392.1.path1;Name=FBgn0050392.1;Dir=sensecoverage=100.0;identity=100.0;matches=663;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014732
Chr2	stalkie_big_nohaplotig	exon	10693639	10693793	100	+	.	Parent=FBgn0050392.1.mrna1;Target=FBgn0050392.1 1 155 +
Chr2	stalkie_big_nohaplotig	exon	10693866	10694080	100	+	.	Parent=FBgn0050392.1.mrna1;Target=FBgn0050392.1 156 370 +
Chr2	stalkie_big_nohaplotig	exon	10695051	10695343	100	+	.	Parent=FBgn0050392.1.mrna1;Target=FBgn0050392.1 371 663 +
Chr2	stalkie_big_nohaplotig	CDS	10693639	10693793	.	+	0	Parent=FBgn0050392.1.mrna1;Target=FBgn0050392.1 1 155 +
Chr2	stalkie_big_nohaplotig	CDS	10693866	10694080	.	+	1	Parent=FBgn0050392.1.mrna1;Target=FBgn0050392.1 156 370 +
Chr2	stalkie_big_nohaplotig	CDS	10695051	10695343	.	+	2	Parent=FBgn0050392.1.mrna1;Target=FBgn0050392.1 371 663 +
Chr2	gffcl	locus	10695708	10697207	.	-	.	ID=RLOC_00014733;geneIDs=FBgn0033471.1.path1;transcripts=FBgn0033471.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10695708	10697207	.	-	.	ID=FBgn0033471.1.mrna1;geneID=FBgn0033471.1.path1;Name=FBgn0033471.1;Dir=sensecoverage=100.0;identity=98.9;matches=1220;mismatches=13;indels=0;unknowns=0;locus=RLOC_00014733
Chr2	stalkie_big_nohaplotig	exon	10695708	10695842	98	-	.	Parent=FBgn0033471.1.mrna1;Target=FBgn0033471.1 1099 1233 +
Chr2	stalkie_big_nohaplotig	exon	10695898	10696000	99	-	.	Parent=FBgn0033471.1.mrna1;Target=FBgn0033471.1 996 1098 +
Chr2	stalkie_big_nohaplotig	exon	10696053	10696271	99	-	.	Parent=FBgn0033471.1.mrna1;Target=FBgn0033471.1 777 995 +
Chr2	stalkie_big_nohaplotig	exon	10696328	10696891	99	-	.	Parent=FBgn0033471.1.mrna1;Target=FBgn0033471.1 213 776 +
Chr2	stalkie_big_nohaplotig	exon	10696943	10697108	98	-	.	Parent=FBgn0033471.1.mrna1;Target=FBgn0033471.1 47 212 +
Chr2	stalkie_big_nohaplotig	exon	10697162	10697207	97	-	.	Parent=FBgn0033471.1.mrna1;Target=FBgn0033471.1 1 46 +
Chr2	stalkie_big_nohaplotig	CDS	10695708	10695842	.	-	0	Parent=FBgn0033471.1.mrna1;Target=FBgn0033471.1 1099 1233 +
Chr2	stalkie_big_nohaplotig	CDS	10695898	10696000	.	-	1	Parent=FBgn0033471.1.mrna1;Target=FBgn0033471.1 996 1098 +
Chr2	stalkie_big_nohaplotig	CDS	10696053	10696271	.	-	1	Parent=FBgn0033471.1.mrna1;Target=FBgn0033471.1 777 995 +
Chr2	stalkie_big_nohaplotig	CDS	10696328	10696891	.	-	1	Parent=FBgn0033471.1.mrna1;Target=FBgn0033471.1 213 776 +
Chr2	stalkie_big_nohaplotig	CDS	10696943	10697108	.	-	2	Parent=FBgn0033471.1.mrna1;Target=FBgn0033471.1 47 212 +
Chr2	stalkie_big_nohaplotig	CDS	10697162	10697207	.	-	0	Parent=FBgn0033471.1.mrna1;Target=FBgn0033471.1 1 46 +
Chr2	gffcl	locus	10698805	10707631	.	+	.	ID=RLOC_00014734;geneIDs=FBgn0033688.1.path1;transcripts=FBgn0033688.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10698805	10707631	.	+	.	ID=FBgn0033688.1.mrna1;geneID=FBgn0033688.1.path1;Name=FBgn0033688.1;Dir=sensecoverage=100.0;identity=99.7;matches=7180;mismatches=23;indels=0;unknowns=0;locus=RLOC_00014734
Chr2	stalkie_big_nohaplotig	exon	10698805	10699433	99	+	.	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 1 629 +
Chr2	stalkie_big_nohaplotig	exon	10699491	10699706	99	+	.	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 630 845 +
Chr2	stalkie_big_nohaplotig	exon	10699763	10699975	98	+	.	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 846 1058 +
Chr2	stalkie_big_nohaplotig	exon	10700045	10700170	100	+	.	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 1059 1184 +
Chr2	stalkie_big_nohaplotig	exon	10700597	10701016	100	+	.	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 1185 1604 +
Chr2	stalkie_big_nohaplotig	exon	10701075	10701292	100	+	.	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 1605 1822 +
Chr2	stalkie_big_nohaplotig	exon	10701348	10701574	99	+	.	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 1823 2049 +
Chr2	stalkie_big_nohaplotig	exon	10701635	10702459	99	+	.	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 2050 2874 +
Chr2	stalkie_big_nohaplotig	exon	10702532	10702724	100	+	.	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 2875 3067 +
Chr2	stalkie_big_nohaplotig	exon	10703024	10703597	99	+	.	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 3068 3641 +
Chr2	stalkie_big_nohaplotig	exon	10703663	10703813	99	+	.	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 3642 3792 +
Chr2	stalkie_big_nohaplotig	exon	10703873	10704049	99	+	.	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 3793 3969 +
Chr2	stalkie_big_nohaplotig	exon	10704112	10704403	100	+	.	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 3970 4261 +
Chr2	stalkie_big_nohaplotig	exon	10704574	10706189	99	+	.	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 4262 5877 +
Chr2	stalkie_big_nohaplotig	exon	10706245	10706976	99	+	.	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 5878 6609 +
Chr2	stalkie_big_nohaplotig	exon	10707038	10707631	99	+	.	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 6610 7203 +
Chr2	stalkie_big_nohaplotig	CDS	10698805	10699433	.	+	0	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 1 629 +
Chr2	stalkie_big_nohaplotig	CDS	10699491	10699706	.	+	1	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 630 845 +
Chr2	stalkie_big_nohaplotig	CDS	10699763	10699975	.	+	1	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 846 1058 +
Chr2	stalkie_big_nohaplotig	CDS	10700045	10700170	.	+	1	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 1059 1184 +
Chr2	stalkie_big_nohaplotig	CDS	10700597	10701016	.	+	1	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 1185 1604 +
Chr2	stalkie_big_nohaplotig	CDS	10701075	10701292	.	+	1	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 1605 1822 +
Chr2	stalkie_big_nohaplotig	CDS	10701348	10701574	.	+	2	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 1823 2049 +
Chr2	stalkie_big_nohaplotig	CDS	10701635	10702459	.	+	0	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 2050 2874 +
Chr2	stalkie_big_nohaplotig	CDS	10702532	10702724	.	+	0	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 2875 3067 +
Chr2	stalkie_big_nohaplotig	CDS	10703024	10703597	.	+	2	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 3068 3641 +
Chr2	stalkie_big_nohaplotig	CDS	10703663	10703813	.	+	1	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 3642 3792 +
Chr2	stalkie_big_nohaplotig	CDS	10703873	10704049	.	+	0	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 3793 3969 +
Chr2	stalkie_big_nohaplotig	CDS	10704112	10704403	.	+	0	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 3970 4261 +
Chr2	stalkie_big_nohaplotig	CDS	10704574	10706189	.	+	2	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 4262 5877 +
Chr2	stalkie_big_nohaplotig	CDS	10706245	10706976	.	+	0	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 5878 6609 +
Chr2	stalkie_big_nohaplotig	CDS	10707038	10707631	.	+	0	Parent=FBgn0033688.1.mrna1;Target=FBgn0033688.1 6610 7203 +
Chr2	gffcl	locus	10709093	10709579	.	-	.	ID=RLOC_00014735;geneIDs=FBgn0033687.2.path1;transcripts=FBgn0033687.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10709093	10709579	.	-	.	ID=FBgn0033687.2.mrna1;geneID=FBgn0033687.2.path1;Name=FBgn0033687.2;Dir=sensecoverage=100.0;identity=100.0;matches=345;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014735
Chr2	stalkie_big_nohaplotig	exon	10709093	10709254	100	-	.	Parent=FBgn0033687.2.mrna1;Target=FBgn0033687.2 184 345 +
Chr2	stalkie_big_nohaplotig	exon	10709327	10709410	100	-	.	Parent=FBgn0033687.2.mrna1;Target=FBgn0033687.2 100 183 +
Chr2	stalkie_big_nohaplotig	exon	10709481	10709579	100	-	.	Parent=FBgn0033687.2.mrna1;Target=FBgn0033687.2 1 99 +
Chr2	stalkie_big_nohaplotig	CDS	10709093	10709254	.	-	0	Parent=FBgn0033687.2.mrna1;Target=FBgn0033687.2 184 345 +
Chr2	stalkie_big_nohaplotig	CDS	10709327	10709410	.	-	0	Parent=FBgn0033687.2.mrna1;Target=FBgn0033687.2 100 183 +
Chr2	stalkie_big_nohaplotig	CDS	10709481	10709579	.	-	0	Parent=FBgn0033687.2.mrna1;Target=FBgn0033687.2 1 99 +
Chr2	gffcl	locus	10712544	10723542	.	-	.	ID=RLOC_00014736;geneIDs=FBgn0033686.1.path1;transcripts=FBgn0033686.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10712544	10723542	.	-	.	ID=FBgn0033686.1.mrna1;geneID=FBgn0033686.1.path1;Name=FBgn0033686.1;Dir=sensecoverage=100.0;identity=99.9;matches=1169;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014736
Chr2	stalkie_big_nohaplotig	exon	10712544	10713300	100	-	.	Parent=FBgn0033686.1.mrna1;Target=FBgn0033686.1 414 1170 +
Chr2	stalkie_big_nohaplotig	exon	10713381	10713550	100	-	.	Parent=FBgn0033686.1.mrna1;Target=FBgn0033686.1 244 413 +
Chr2	stalkie_big_nohaplotig	exon	10723228	10723305	98	-	.	Parent=FBgn0033686.1.mrna1;Target=FBgn0033686.1 166 243 +
Chr2	stalkie_big_nohaplotig	exon	10723378	10723542	100	-	.	Parent=FBgn0033686.1.mrna1;Target=FBgn0033686.1 1 165 +
Chr2	stalkie_big_nohaplotig	CDS	10712544	10713300	.	-	1	Parent=FBgn0033686.1.mrna1;Target=FBgn0033686.1 414 1170 +
Chr2	stalkie_big_nohaplotig	CDS	10713381	10713550	.	-	0	Parent=FBgn0033686.1.mrna1;Target=FBgn0033686.1 244 413 +
Chr2	stalkie_big_nohaplotig	CDS	10723228	10723305	.	-	0	Parent=FBgn0033686.1.mrna1;Target=FBgn0033686.1 166 243 +
Chr2	stalkie_big_nohaplotig	CDS	10723378	10723542	.	-	0	Parent=FBgn0033686.1.mrna1;Target=FBgn0033686.1 1 165 +
Chr2	gffcl	locus	10716976	10717837	.	+	.	ID=RLOC_00014737;geneIDs=FBgn0027504.path1;transcripts=FBgn0027504.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10716976	10717837	.	+	.	ID=FBgn0027504.mrna1;geneID=FBgn0027504.path1;Name=FBgn0027504;Dir=sensecoverage=100.0;identity=99.8;matches=614;mismatches=0;indels=1;unknowns=0;locus=RLOC_00014737
Chr2	stalkie_big_nohaplotig	exon	10716976	10717396	100	+	.	Parent=FBgn0027504.mrna1;Target=FBgn0027504 1 421 +
Chr2	stalkie_big_nohaplotig	exon	10717584	10717739	100	+	.	Parent=FBgn0027504.mrna1;Target=FBgn0027504 422 577 +
Chr2	stalkie_big_nohaplotig	exon	10717801	10717837	97	+	.	Parent=FBgn0027504.mrna1;Target=FBgn0027504 578 615 +
Chr2	stalkie_big_nohaplotig	CDS	10716976	10717396	.	+	0	Parent=FBgn0027504.mrna1;Target=FBgn0027504 1 421 +
Chr2	stalkie_big_nohaplotig	CDS	10717584	10717739	.	+	2	Parent=FBgn0027504.mrna1;Target=FBgn0027504 422 577 +
Chr2	stalkie_big_nohaplotig	CDS	10717801	10717837	.	+	2	Parent=FBgn0027504.mrna1;Target=FBgn0027504 578 615 +
Chr2	gffcl	locus	10728122	10729574	.	-	.	ID=RLOC_00014738;geneIDs=FBgn0034314.2.path1;transcripts=FBgn0034314.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10728122	10729574	.	-	.	ID=FBgn0034314.2.mrna1;geneID=FBgn0034314.2.path1;Name=FBgn0034314.2;Dir=sensecoverage=100.0;identity=99.2;matches=949;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014738
Chr2	stalkie_big_nohaplotig	exon	10728122	10728349	98	-	.	Parent=FBgn0034314.2.mrna1;Target=FBgn0034314.2 730 957 +
Chr2	stalkie_big_nohaplotig	exon	10728410	10728467	98	-	.	Parent=FBgn0034314.2.mrna1;Target=FBgn0034314.2 672 729 +
Chr2	stalkie_big_nohaplotig	exon	10728545	10728637	100	-	.	Parent=FBgn0034314.2.mrna1;Target=FBgn0034314.2 579 671 +
Chr2	stalkie_big_nohaplotig	exon	10728796	10728974	100	-	.	Parent=FBgn0034314.2.mrna1;Target=FBgn0034314.2 400 578 +
Chr2	stalkie_big_nohaplotig	exon	10729049	10729118	100	-	.	Parent=FBgn0034314.2.mrna1;Target=FBgn0034314.2 330 399 +
Chr2	stalkie_big_nohaplotig	exon	10729174	10729383	98	-	.	Parent=FBgn0034314.2.mrna1;Target=FBgn0034314.2 120 329 +
Chr2	stalkie_big_nohaplotig	exon	10729456	10729574	99	-	.	Parent=FBgn0034314.2.mrna1;Target=FBgn0034314.2 1 119 +
Chr2	stalkie_big_nohaplotig	CDS	10728122	10728349	.	-	0	Parent=FBgn0034314.2.mrna1;Target=FBgn0034314.2 730 957 +
Chr2	stalkie_big_nohaplotig	CDS	10728410	10728467	.	-	1	Parent=FBgn0034314.2.mrna1;Target=FBgn0034314.2 672 729 +
Chr2	stalkie_big_nohaplotig	CDS	10728545	10728637	.	-	1	Parent=FBgn0034314.2.mrna1;Target=FBgn0034314.2 579 671 +
Chr2	stalkie_big_nohaplotig	CDS	10728796	10728974	.	-	0	Parent=FBgn0034314.2.mrna1;Target=FBgn0034314.2 400 578 +
Chr2	stalkie_big_nohaplotig	CDS	10729049	10729118	.	-	1	Parent=FBgn0034314.2.mrna1;Target=FBgn0034314.2 330 399 +
Chr2	stalkie_big_nohaplotig	CDS	10729174	10729383	.	-	1	Parent=FBgn0034314.2.mrna1;Target=FBgn0034314.2 120 329 +
Chr2	stalkie_big_nohaplotig	CDS	10729456	10729574	.	-	0	Parent=FBgn0034314.2.mrna1;Target=FBgn0034314.2 1 119 +
Chr2	gffcl	locus	10730815	10732063	.	+	.	ID=RLOC_00014739;geneIDs=FBgn0029093.1.path1;transcripts=FBgn0029093.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10730815	10732063	.	+	.	ID=FBgn0029093.1.mrna1;geneID=FBgn0029093.1.path1;Name=FBgn0029093.1;Dir=sensecoverage=100.0;identity=99.6;matches=1180;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014739
Chr2	stalkie_big_nohaplotig	exon	10730815	10730836	100	+	.	Parent=FBgn0029093.1.mrna1;Target=FBgn0029093.1 1 22 +
Chr2	stalkie_big_nohaplotig	exon	10730901	10732063	99	+	.	Parent=FBgn0029093.1.mrna1;Target=FBgn0029093.1 23 1185 +
Chr2	stalkie_big_nohaplotig	CDS	10730815	10730836	.	+	0	Parent=FBgn0029093.1.mrna1;Target=FBgn0029093.1 1 22 +
Chr2	stalkie_big_nohaplotig	CDS	10730901	10732063	.	+	2	Parent=FBgn0029093.1.mrna1;Target=FBgn0029093.1 23 1185 +
Chr2	gffcl	locus	10734224	10735992	.	-	.	ID=RLOC_00014740;geneIDs=FBgn0033226.1.path1;transcripts=FBgn0033226.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10734224	10735992	.	-	.	ID=FBgn0033226.1.mrna1;geneID=FBgn0033226.1.path1;Name=FBgn0033226.1;Dir=sensecoverage=100.0;identity=97.7;matches=1194;mismatches=14;indels=14;unknowns=0;locus=RLOC_00014740
Chr2	stalkie_big_nohaplotig	exon	10734224	10735387	97	-	.	Parent=FBgn0033226.1.mrna1;Target=FBgn0033226.1 46 1221 +
Chr2	stalkie_big_nohaplotig	exon	10735948	10735992	100	-	.	Parent=FBgn0033226.1.mrna1;Target=FBgn0033226.1 1 45 +
Chr2	stalkie_big_nohaplotig	CDS	10734224	10735387	.	-	0	Parent=FBgn0033226.1.mrna1;Target=FBgn0033226.1 46 1221 +
Chr2	stalkie_big_nohaplotig	CDS	10735948	10735992	.	-	0	Parent=FBgn0033226.1.mrna1;Target=FBgn0033226.1 1 45 +
Chr2	gffcl	locus	10736089	10736400	.	-	.	ID=RLOC_00014741;geneIDs=comp145019_c0_seq1.path1;transcripts=comp145019_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10736089	10736400	.	-	.	ID=comp145019_c0_seq1.mrna1;geneID=comp145019_c0_seq1.path1;Name=comp145019_c0_seq1;Dir=indeterminatecoverage=99.1;identity=93.1;matches=296;mismatches=16;indels=6;unknowns=0;Target=comp145019_c0_seq1 321 4 .;CDS_Target=comp145019_c0_seq1 117 4 .;locus=RLOC_00014741
Chr2	stalkie_big_nohaplotig	exon	10736089	10736400	93	-	.	Parent=comp145019_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10736293	10736400	.	-	0	Parent=comp145019_c0_seq1.mrna1
Chr2	gffcl	locus	10744517	10746221	.	+	.	ID=RLOC_00014742;geneIDs=FBgn0033240.1.path1;transcripts=FBgn0033240.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10744517	10746221	.	+	.	ID=FBgn0033240.1.mrna1;geneID=FBgn0033240.1.path1;Name=FBgn0033240.1;Dir=sensecoverage=100.0;identity=99.6;matches=1419;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014742
Chr2	stalkie_big_nohaplotig	exon	10744517	10744636	100	+	.	Parent=FBgn0033240.1.mrna1;Target=FBgn0033240.1 1 120 +
Chr2	stalkie_big_nohaplotig	exon	10744694	10744897	99	+	.	Parent=FBgn0033240.1.mrna1;Target=FBgn0033240.1 121 324 +
Chr2	stalkie_big_nohaplotig	exon	10744953	10745212	99	+	.	Parent=FBgn0033240.1.mrna1;Target=FBgn0033240.1 325 584 +
Chr2	stalkie_big_nohaplotig	exon	10745265	10745834	99	+	.	Parent=FBgn0033240.1.mrna1;Target=FBgn0033240.1 585 1154 +
Chr2	stalkie_big_nohaplotig	exon	10745888	10746078	99	+	.	Parent=FBgn0033240.1.mrna1;Target=FBgn0033240.1 1155 1345 +
Chr2	stalkie_big_nohaplotig	exon	10746142	10746221	100	+	.	Parent=FBgn0033240.1.mrna1;Target=FBgn0033240.1 1346 1425 +
Chr2	stalkie_big_nohaplotig	CDS	10744517	10744636	.	+	0	Parent=FBgn0033240.1.mrna1;Target=FBgn0033240.1 1 120 +
Chr2	stalkie_big_nohaplotig	CDS	10744694	10744897	.	+	0	Parent=FBgn0033240.1.mrna1;Target=FBgn0033240.1 121 324 +
Chr2	stalkie_big_nohaplotig	CDS	10744953	10745212	.	+	0	Parent=FBgn0033240.1.mrna1;Target=FBgn0033240.1 325 584 +
Chr2	stalkie_big_nohaplotig	CDS	10745265	10745834	.	+	1	Parent=FBgn0033240.1.mrna1;Target=FBgn0033240.1 585 1154 +
Chr2	stalkie_big_nohaplotig	CDS	10745888	10746078	.	+	1	Parent=FBgn0033240.1.mrna1;Target=FBgn0033240.1 1155 1345 +
Chr2	stalkie_big_nohaplotig	CDS	10746142	10746221	.	+	2	Parent=FBgn0033240.1.mrna1;Target=FBgn0033240.1 1346 1425 +
Chr2	gffcl	locus	10747132	10747547	.	+	.	ID=RLOC_00014743;geneIDs=comp134665_c0_seq1.path1;transcripts=comp134665_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10747132	10747547	.	+	.	ID=comp134665_c0_seq1.mrna1;geneID=comp134665_c0_seq1.path1;Name=comp134665_c0_seq1;Dir=indeterminatecoverage=97.0;identity=95.0;matches=396;mismatches=19;indels=2;unknowns=0;Target=comp134665_c0_seq1 416 1 .;CDS_Target=comp134665_c0_seq1 89 3 .;locus=RLOC_00014743
Chr2	stalkie_big_nohaplotig	exon	10747132	10747547	94	+	.	Parent=comp134665_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10747134	10747220	.	+	0	Parent=comp134665_c0_seq1.mrna1
Chr2	gffcl	locus	10748564	10750091	.	-	.	ID=RLOC_00014744;geneIDs=FBgn0033241.1.path1;transcripts=FBgn0033241.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10748564	10750091	.	-	.	ID=FBgn0033241.1.mrna1;geneID=FBgn0033241.1.path1;Name=FBgn0033241.1;Dir=sensecoverage=100.0;identity=99.7;matches=1459;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014744
Chr2	stalkie_big_nohaplotig	exon	10748564	10749553	99	-	.	Parent=FBgn0033241.1.mrna1;Target=FBgn0033241.1 475 1464 +
Chr2	stalkie_big_nohaplotig	exon	10749618	10750091	99	-	.	Parent=FBgn0033241.1.mrna1;Target=FBgn0033241.1 1 474 +
Chr2	stalkie_big_nohaplotig	CDS	10748564	10749553	.	-	0	Parent=FBgn0033241.1.mrna1;Target=FBgn0033241.1 475 1464 +
Chr2	stalkie_big_nohaplotig	CDS	10749618	10750091	.	-	0	Parent=FBgn0033241.1.mrna1;Target=FBgn0033241.1 1 474 +
Chr2	gffcl	locus	10754650	10755492	.	+	.	ID=RLOC_00014745;geneIDs=FBgn0034628.path2;transcripts=FBgn0034628.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	10754650	10755492	.	+	.	ID=FBgn0034628.mrna2;geneID=FBgn0034628.path2;Name=FBgn0034628;Dir=sensecoverage=100.0;identity=99.2;matches=705;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014745
Chr2	stalkie_big_nohaplotig	exon	10754650	10754695	100	+	.	Parent=FBgn0034628.mrna2;Target=FBgn0034628 1 46 +
Chr2	stalkie_big_nohaplotig	exon	10754761	10755166	99	+	.	Parent=FBgn0034628.mrna2;Target=FBgn0034628 47 452 +
Chr2	stalkie_big_nohaplotig	exon	10755234	10755492	99	+	.	Parent=FBgn0034628.mrna2;Target=FBgn0034628 453 711 +
Chr2	stalkie_big_nohaplotig	CDS	10754650	10754695	.	+	0	Parent=FBgn0034628.mrna2;Target=FBgn0034628 1 46 +
Chr2	stalkie_big_nohaplotig	CDS	10754761	10755166	.	+	2	Parent=FBgn0034628.mrna2;Target=FBgn0034628 47 452 +
Chr2	stalkie_big_nohaplotig	CDS	10755234	10755492	.	+	1	Parent=FBgn0034628.mrna2;Target=FBgn0034628 453 711 +
Chr2	gffcl	locus	10763104	10768650	.	+	.	ID=RLOC_00014746;geneIDs=FBgn0034629.1.path1;transcripts=FBgn0034629.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10763104	10768650	.	+	.	ID=FBgn0034629.1.mrna1;geneID=FBgn0034629.1.path1;Name=FBgn0034629.1;Dir=sensecoverage=99.6;identity=99.3;matches=1480;mismatches=10;indels=1;unknowns=0;locus=RLOC_00014746
Chr2	stalkie_big_nohaplotig	exon	10763104	10763287	98	+	.	Parent=FBgn0034629.1.mrna1;Target=FBgn0034629.1 7 190 +
Chr2	stalkie_big_nohaplotig	exon	10767167	10767323	99	+	.	Parent=FBgn0034629.1.mrna1;Target=FBgn0034629.1 191 347 +
Chr2	stalkie_big_nohaplotig	exon	10767392	10767684	99	+	.	Parent=FBgn0034629.1.mrna1;Target=FBgn0034629.1 348 640 +
Chr2	stalkie_big_nohaplotig	exon	10767741	10768146	99	+	.	Parent=FBgn0034629.1.mrna1;Target=FBgn0034629.1 641 1046 +
Chr2	stalkie_big_nohaplotig	exon	10768201	10768650	98	+	.	Parent=FBgn0034629.1.mrna1;Target=FBgn0034629.1 1047 1497 +
Chr2	stalkie_big_nohaplotig	CDS	10763104	10763287	.	+	0	Parent=FBgn0034629.1.mrna1;Target=FBgn0034629.1 7 190 +
Chr2	stalkie_big_nohaplotig	CDS	10767167	10767323	.	+	2	Parent=FBgn0034629.1.mrna1;Target=FBgn0034629.1 191 347 +
Chr2	stalkie_big_nohaplotig	CDS	10767392	10767684	.	+	1	Parent=FBgn0034629.1.mrna1;Target=FBgn0034629.1 348 640 +
Chr2	stalkie_big_nohaplotig	CDS	10767741	10768146	.	+	2	Parent=FBgn0034629.1.mrna1;Target=FBgn0034629.1 641 1046 +
Chr2	stalkie_big_nohaplotig	CDS	10768201	10768650	.	+	1	Parent=FBgn0034629.1.mrna1;Target=FBgn0034629.1 1047 1497 +
Chr2	gffcl	locus	10769924	10792396	.	.	.	ID=RLOC_00014747;geneIDs=FBgn0034629.2.path1,comp113093_c0_seq1.path1,comp163331_c0_seq1.path1;transcripts=comp163331_c0_seq1.mrna1,FBgn0034629.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10769924	10782695	.	+	.	ID=comp163331_c0_seq1.mrna1;geneID=comp163331_c0_seq1.path1;Name=comp163331_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=2248;mismatches=23;indels=2;unknowns=0;locus=RLOC_00014747
Chr2	stalkie_big_nohaplotig	exon	10769924	10770206	97	+	.	Parent=comp163331_c0_seq1.mrna1;Target=comp163331_c0_seq1 1990 2274 -
Chr2	stalkie_big_nohaplotig	exon	10772188	10772344	100	+	.	Parent=comp163331_c0_seq1.mrna1;Target=comp163331_c0_seq1 1833 1989 -
Chr2	stalkie_big_nohaplotig	exon	10772400	10772450	98	+	.	Parent=comp163331_c0_seq1.mrna1;Target=comp163331_c0_seq1 1782 1832 -
Chr2	stalkie_big_nohaplotig	exon	10780196	10780437	97	+	.	Parent=comp163331_c0_seq1.mrna1;Target=comp163331_c0_seq1 1540 1781 -
Chr2	stalkie_big_nohaplotig	exon	10780499	10780904	98	+	.	Parent=comp163331_c0_seq1.mrna1;Target=comp163331_c0_seq1 1134 1539 -
Chr2	stalkie_big_nohaplotig	exon	10780970	10781473	99	+	.	Parent=comp163331_c0_seq1.mrna1;Target=comp163331_c0_seq1 630 1133 -
Chr2	stalkie_big_nohaplotig	exon	10781535	10781640	98	+	.	Parent=comp163331_c0_seq1.mrna1;Target=comp163331_c0_seq1 524 629 -
Chr2	stalkie_big_nohaplotig	exon	10781999	10782154	100	+	.	Parent=comp163331_c0_seq1.mrna1;Target=comp163331_c0_seq1 368 523 -
Chr2	stalkie_big_nohaplotig	exon	10782330	10782695	99	+	.	Parent=comp163331_c0_seq1.mrna1;Target=comp163331_c0_seq1 2 367 -
Chr2	stalkie_big_nohaplotig	CDS	10770080	10770206	.	+	0	Parent=comp163331_c0_seq1.mrna1;Target=comp163331_c0_seq1 1990 2116 .
Chr2	stalkie_big_nohaplotig	CDS	10772188	10772344	.	+	2	Parent=comp163331_c0_seq1.mrna1;Target=comp163331_c0_seq1 1833 1989 .
Chr2	stalkie_big_nohaplotig	CDS	10772400	10772450	.	+	1	Parent=comp163331_c0_seq1.mrna1;Target=comp163331_c0_seq1 1782 1832 .
Chr2	stalkie_big_nohaplotig	CDS	10780196	10780437	.	+	1	Parent=comp163331_c0_seq1.mrna1;Target=comp163331_c0_seq1 1540 1781 .
Chr2	stalkie_big_nohaplotig	CDS	10780499	10780904	.	+	2	Parent=comp163331_c0_seq1.mrna1;Target=comp163331_c0_seq1 1134 1539 .
Chr2	stalkie_big_nohaplotig	CDS	10780970	10781473	.	+	1	Parent=comp163331_c0_seq1.mrna1;Target=comp163331_c0_seq1 630 1133 .
Chr2	stalkie_big_nohaplotig	CDS	10781535	10781640	.	+	1	Parent=comp163331_c0_seq1.mrna1;Target=comp163331_c0_seq1 524 629 .
Chr2	stalkie_big_nohaplotig	CDS	10781999	10782154	.	+	0	Parent=comp163331_c0_seq1.mrna1;Target=comp163331_c0_seq1 368 523 .
Chr2	stalkie_big_nohaplotig	CDS	10782330	10782590	.	+	0	Parent=comp163331_c0_seq1.mrna1;Target=comp163331_c0_seq1 107 367 .
Chr2	stalkie_big_nohaplotig	mRNA	10770056	10792116	.	+	.	ID=FBgn0034629.2.mrna1;geneID=FBgn0034629.2.path1;Name=FBgn0034629.2;Dir=sensecoverage=100.0;identity=98.5;matches=2000;mismatches=31;indels=0;unknowns=0;locus=RLOC_00014747
Chr2	stalkie_big_nohaplotig	exon	10770056	10770206	98	+	.	Parent=FBgn0034629.2.mrna1;Target=FBgn0034629.2 1 151 +
Chr2	stalkie_big_nohaplotig	exon	10772188	10772344	100	+	.	Parent=FBgn0034629.2.mrna1;Target=FBgn0034629.2 152 308 +
Chr2	stalkie_big_nohaplotig	exon	10772400	10772558	97	+	.	Parent=FBgn0034629.2.mrna1;Target=FBgn0034629.2 309 467 +
Chr2	stalkie_big_nohaplotig	exon	10780304	10780437	97	+	.	Parent=FBgn0034629.2.mrna1;Target=FBgn0034629.2 468 601 +
Chr2	stalkie_big_nohaplotig	exon	10780499	10780904	98	+	.	Parent=FBgn0034629.2.mrna1;Target=FBgn0034629.2 602 1007 +
Chr2	stalkie_big_nohaplotig	exon	10780970	10781010	100	+	.	Parent=FBgn0034629.2.mrna1;Target=FBgn0034629.2 1008 1048 +
Chr2	stalkie_big_nohaplotig	exon	10790519	10790981	99	+	.	Parent=FBgn0034629.2.mrna1;Target=FBgn0034629.2 1049 1511 +
Chr2	stalkie_big_nohaplotig	exon	10791055	10791160	100	+	.	Parent=FBgn0034629.2.mrna1;Target=FBgn0034629.2 1512 1617 +
Chr2	stalkie_big_nohaplotig	exon	10791526	10791681	100	+	.	Parent=FBgn0034629.2.mrna1;Target=FBgn0034629.2 1618 1773 +
Chr2	stalkie_big_nohaplotig	exon	10791859	10792116	94	+	.	Parent=FBgn0034629.2.mrna1;Target=FBgn0034629.2 1774 2031 +
Chr2	stalkie_big_nohaplotig	CDS	10770056	10770206	.	+	0	Parent=FBgn0034629.2.mrna1;Target=FBgn0034629.2 1 151 +
Chr2	stalkie_big_nohaplotig	CDS	10772188	10772344	.	+	2	Parent=FBgn0034629.2.mrna1;Target=FBgn0034629.2 152 308 +
Chr2	stalkie_big_nohaplotig	CDS	10772400	10772558	.	+	1	Parent=FBgn0034629.2.mrna1;Target=FBgn0034629.2 309 467 +
Chr2	stalkie_big_nohaplotig	CDS	10780304	10780437	.	+	1	Parent=FBgn0034629.2.mrna1;Target=FBgn0034629.2 468 601 +
Chr2	stalkie_big_nohaplotig	CDS	10780499	10780904	.	+	2	Parent=FBgn0034629.2.mrna1;Target=FBgn0034629.2 602 1007 +
Chr2	stalkie_big_nohaplotig	CDS	10780970	10781010	.	+	1	Parent=FBgn0034629.2.mrna1;Target=FBgn0034629.2 1008 1048 +
Chr2	stalkie_big_nohaplotig	CDS	10790519	10790981	.	+	2	Parent=FBgn0034629.2.mrna1;Target=FBgn0034629.2 1049 1511 +
Chr2	stalkie_big_nohaplotig	CDS	10791055	10791160	.	+	1	Parent=FBgn0034629.2.mrna1;Target=FBgn0034629.2 1512 1617 +
Chr2	stalkie_big_nohaplotig	CDS	10791526	10791681	.	+	0	Parent=FBgn0034629.2.mrna1;Target=FBgn0034629.2 1618 1773 +
Chr2	stalkie_big_nohaplotig	CDS	10791859	10792116	.	+	0	Parent=FBgn0034629.2.mrna1;Target=FBgn0034629.2 1774 2031 +
Chr2	gffcl	locus	10777816	10778260	.	+	.	ID=RLOC_00014748;geneIDs=comp131545_c0_seq1.path1;transcripts=comp131545_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10777816	10778260	.	+	.	ID=comp131545_c0_seq1.mrna1;geneID=comp131545_c0_seq1.path1;Name=comp131545_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=438;mismatches=7;indels=0;unknowns=0;Target=comp131545_c0_seq1 445 1 .;CDS_Target=comp131545_c0_seq1 163 2 .;locus=RLOC_00014748
Chr2	stalkie_big_nohaplotig	exon	10777816	10778260	98	+	.	Parent=comp131545_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10777817	10777978	.	+	0	Parent=comp131545_c0_seq1.mrna1
Chr2	gffcl	locus	10793816	10794720	.	+	.	ID=RLOC_00014749;geneIDs=comp153052_c0_seq1.path1;transcripts=comp153052_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10793816	10794720	.	+	.	ID=comp153052_c0_seq1.mrna1;geneID=comp153052_c0_seq1.path1;Name=comp153052_c0_seq1;Dir=indeterminatecoverage=98.7;identity=99.4;matches=900;mismatches=4;indels=1;unknowns=0;Target=comp153052_c0_seq1 916 13 .;CDS_Target=comp153052_c0_seq1 666 634 .;locus=RLOC_00014749
Chr2	stalkie_big_nohaplotig	exon	10793816	10794720	99	+	.	Parent=comp153052_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10794437	10794469	.	+	0	Parent=comp153052_c0_seq1.mrna1
Chr2	gffcl	locus	10795758	11900368	.	-	.	ID=RLOC_00014750;geneIDs=FBgn0010415.1.path1,FBgn0023495.1.path1;transcripts=FBgn0010415.1.mrna1,FBgn0023495.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10795758	11900368	.	-	.	ID=FBgn0010415.1.mrna1;geneID=FBgn0010415.1.path1;Name=FBgn0010415.1;Dir=sensecoverage=76.2;identity=100.0;matches=513;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014750
Chr2	stalkie_big_nohaplotig	exon	10795758	10795927	100	-	.	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 674 843 +
Chr2	stalkie_big_nohaplotig	exon	10796009	10796176	100	-	.	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 506 673 +
Chr2	stalkie_big_nohaplotig	exon	10814864	10814980	100	-	.	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 389 505 +
Chr2	stalkie_big_nohaplotig	exon	10821509	10821517	100	-	.	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 346 354 +
Chr2	stalkie_big_nohaplotig	exon	10821558	10821567	100	-	.	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 276 285 +
Chr2	stalkie_big_nohaplotig	exon	10838121	10838125	100	-	.	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 271 275 +
Chr2	stalkie_big_nohaplotig	exon	10844837	10844845	100	-	.	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 262 270 +
Chr2	stalkie_big_nohaplotig	exon	10849267	10849270	100	-	.	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 258 261 +
Chr2	stalkie_big_nohaplotig	exon	11853798	11853799	100	-	.	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 256 257 +
Chr2	stalkie_big_nohaplotig	exon	11867682	11867690	100	-	.	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 211 219 +
Chr2	stalkie_big_nohaplotig	exon	11871773	11871774	100	-	.	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 209 210 +
Chr2	stalkie_big_nohaplotig	exon	11894094	11894098	100	-	.	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 204 208 +
Chr2	stalkie_big_nohaplotig	exon	11900367	11900368	100	-	.	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 202 203 +
Chr2	stalkie_big_nohaplotig	CDS	10795758	10795927	.	-	0	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 674 843 +
Chr2	stalkie_big_nohaplotig	CDS	10796009	10796176	.	-	0	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 506 673 +
Chr2	stalkie_big_nohaplotig	CDS	10814864	10814980	.	-	0	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 389 505 +
Chr2	stalkie_big_nohaplotig	CDS	10821509	10821517	.	-	0	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 346 354 +
Chr2	stalkie_big_nohaplotig	CDS	10821558	10821567	.	-	1	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 276 285 +
Chr2	stalkie_big_nohaplotig	CDS	10838121	10838125	.	-	0	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 271 275 +
Chr2	stalkie_big_nohaplotig	CDS	10844837	10844845	.	-	0	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 262 270 +
Chr2	stalkie_big_nohaplotig	CDS	10849267	10849270	.	-	1	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 258 261 +
Chr2	stalkie_big_nohaplotig	CDS	11853798	11853799	.	-	0	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 256 257 +
Chr2	stalkie_big_nohaplotig	CDS	11867682	11867690	.	-	0	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 211 219 +
Chr2	stalkie_big_nohaplotig	CDS	11871773	11871774	.	-	2	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 209 210 +
Chr2	stalkie_big_nohaplotig	CDS	11894094	11894098	.	-	1	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 204 208 +
Chr2	stalkie_big_nohaplotig	CDS	11900367	11900368	.	-	0	Parent=FBgn0010415.1.mrna1;Target=FBgn0010415.1 202 203 +
Chr2	stalkie_big_nohaplotig	mRNA	11853097	11854522	.	-	.	ID=FBgn0023495.1.mrna1;geneID=FBgn0023495.1.path1;Name=FBgn0023495.1;Dir=sensecoverage=100.0;identity=99.8;matches=1224;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014750
Chr2	stalkie_big_nohaplotig	exon	11853097	11853474	99	-	.	Parent=FBgn0023495.1.mrna1;Target=FBgn0023495.1 850 1227 +
Chr2	stalkie_big_nohaplotig	exon	11853543	11853934	100	-	.	Parent=FBgn0023495.1.mrna1;Target=FBgn0023495.1 458 849 +
Chr2	stalkie_big_nohaplotig	exon	11853990	11854317	100	-	.	Parent=FBgn0023495.1.mrna1;Target=FBgn0023495.1 130 457 +
Chr2	stalkie_big_nohaplotig	exon	11854394	11854522	98	-	.	Parent=FBgn0023495.1.mrna1;Target=FBgn0023495.1 1 129 +
Chr2	stalkie_big_nohaplotig	CDS	11853097	11853474	.	-	0	Parent=FBgn0023495.1.mrna1;Target=FBgn0023495.1 850 1227 +
Chr2	stalkie_big_nohaplotig	CDS	11853543	11853934	.	-	2	Parent=FBgn0023495.1.mrna1;Target=FBgn0023495.1 458 849 +
Chr2	stalkie_big_nohaplotig	CDS	11853990	11854317	.	-	0	Parent=FBgn0023495.1.mrna1;Target=FBgn0023495.1 130 457 +
Chr2	stalkie_big_nohaplotig	CDS	11854394	11854522	.	-	0	Parent=FBgn0023495.1.mrna1;Target=FBgn0023495.1 1 129 +
Chr2	gffcl	locus	10833972	10834814	.	-	.	ID=RLOC_00014751;geneIDs=FBgn0034628.path1;transcripts=FBgn0034628.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10833972	10834814	.	-	.	ID=FBgn0034628.mrna1;geneID=FBgn0034628.path1;Name=FBgn0034628;Dir=sensecoverage=100.0;identity=99.3;matches=706;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014751
Chr2	stalkie_big_nohaplotig	exon	10833972	10834230	99	-	.	Parent=FBgn0034628.mrna1;Target=FBgn0034628 453 711 +
Chr2	stalkie_big_nohaplotig	exon	10834298	10834703	99	-	.	Parent=FBgn0034628.mrna1;Target=FBgn0034628 47 452 +
Chr2	stalkie_big_nohaplotig	exon	10834769	10834814	100	-	.	Parent=FBgn0034628.mrna1;Target=FBgn0034628 1 46 +
Chr2	stalkie_big_nohaplotig	CDS	10833972	10834230	.	-	1	Parent=FBgn0034628.mrna1;Target=FBgn0034628 453 711 +
Chr2	stalkie_big_nohaplotig	CDS	10834298	10834703	.	-	2	Parent=FBgn0034628.mrna1;Target=FBgn0034628 47 452 +
Chr2	stalkie_big_nohaplotig	CDS	10834769	10834814	.	-	0	Parent=FBgn0034628.mrna1;Target=FBgn0034628 1 46 +
Chr2	gffcl	locus	10897289	10899462	.	+	.	ID=RLOC_00014752;geneIDs=FBgn0015903.1.path1;transcripts=FBgn0015903.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10897289	10899462	.	+	.	ID=FBgn0015903.1.mrna1;geneID=FBgn0015903.1.path1;Name=FBgn0015903.1;Dir=sensecoverage=97.8;identity=99.2;matches=1298;mismatches=10;indels=0;unknowns=0;locus=RLOC_00014752
Chr2	stalkie_big_nohaplotig	exon	10897289	10897394	100	+	.	Parent=FBgn0015903.1.mrna1;Target=FBgn0015903.1 31 136 +
Chr2	stalkie_big_nohaplotig	exon	10897661	10897921	98	+	.	Parent=FBgn0015903.1.mrna1;Target=FBgn0015903.1 137 397 +
Chr2	stalkie_big_nohaplotig	exon	10898454	10898700	98	+	.	Parent=FBgn0015903.1.mrna1;Target=FBgn0015903.1 398 644 +
Chr2	stalkie_big_nohaplotig	exon	10898769	10899462	99	+	.	Parent=FBgn0015903.1.mrna1;Target=FBgn0015903.1 645 1338 +
Chr2	stalkie_big_nohaplotig	CDS	10897289	10897394	.	+	0	Parent=FBgn0015903.1.mrna1;Target=FBgn0015903.1 31 136 +
Chr2	stalkie_big_nohaplotig	CDS	10897661	10897921	.	+	2	Parent=FBgn0015903.1.mrna1;Target=FBgn0015903.1 137 397 +
Chr2	stalkie_big_nohaplotig	CDS	10898454	10898700	.	+	2	Parent=FBgn0015903.1.mrna1;Target=FBgn0015903.1 398 644 +
Chr2	stalkie_big_nohaplotig	CDS	10898769	10899462	.	+	1	Parent=FBgn0015903.1.mrna1;Target=FBgn0015903.1 645 1338 +
Chr2	gffcl	locus	10902509	10905025	.	-	.	ID=RLOC_00014753;geneIDs=comp148227_c0_seq1.path1;transcripts=comp148227_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10902509	10905025	.	-	.	ID=comp148227_c0_seq1.mrna1;geneID=comp148227_c0_seq1.path1;Name=comp148227_c0_seq1;Dir=antisensecoverage=99.1;identity=99.4;matches=1134;mismatches=7;indels=0;unknowns=0;locus=RLOC_00014753
Chr2	stalkie_big_nohaplotig	exon	10902509	10903103	99	-	.	Parent=comp148227_c0_seq1.mrna1;Target=comp148227_c0_seq1 1 595 -
Chr2	stalkie_big_nohaplotig	exon	10903175	10903232	100	-	.	Parent=comp148227_c0_seq1.mrna1;Target=comp148227_c0_seq1 596 653 -
Chr2	stalkie_big_nohaplotig	exon	10903291	10903423	100	-	.	Parent=comp148227_c0_seq1.mrna1;Target=comp148227_c0_seq1 654 786 -
Chr2	stalkie_big_nohaplotig	exon	10904603	10904837	97	-	.	Parent=comp148227_c0_seq1.mrna1;Target=comp148227_c0_seq1 787 1021 -
Chr2	stalkie_big_nohaplotig	exon	10904906	10905025	100	-	.	Parent=comp148227_c0_seq1.mrna1;Target=comp148227_c0_seq1 1022 1141 -
Chr2	stalkie_big_nohaplotig	CDS	10902978	10903103	.	-	0	Parent=comp148227_c0_seq1.mrna1;Target=comp148227_c0_seq1 470 595 .
Chr2	stalkie_big_nohaplotig	CDS	10903175	10903232	.	-	1	Parent=comp148227_c0_seq1.mrna1;Target=comp148227_c0_seq1 596 653 .
Chr2	stalkie_big_nohaplotig	CDS	10903291	10903376	.	-	0	Parent=comp148227_c0_seq1.mrna1;Target=comp148227_c0_seq1 654 739 .
Chr2	gffcl	locus	10905040	10905306	.	-	.	ID=RLOC_00014754;geneIDs=comp135158_c0_seq1.path1;transcripts=comp135158_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10905040	10905306	.	-	.	ID=comp135158_c0_seq1.mrna1;geneID=comp135158_c0_seq1.path1;Name=comp135158_c0_seq1;Dir=indeterminatecoverage=89.3;identity=98.9;matches=264;mismatches=3;indels=0;unknowns=0;Target=comp135158_c0_seq1 288 22 .;CDS_Target=comp135158_c0_seq1 238 65 .;locus=RLOC_00014754
Chr2	stalkie_big_nohaplotig	exon	10905040	10905306	98	-	.	Parent=comp135158_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10905090	10905263	.	-	0	Parent=comp135158_c0_seq1.mrna1
Chr2	gffcl	locus	10906743	10907463	.	-	.	ID=RLOC_00014755;geneIDs=comp146567_c0_seq1.path1;transcripts=comp146567_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10906743	10907463	.	-	.	ID=comp146567_c0_seq1.mrna1;geneID=comp146567_c0_seq1.path1;Name=comp146567_c0_seq1;Dir=antisensecoverage=100.0;identity=97.2;matches=593;mismatches=7;indels=10;unknowns=0;locus=RLOC_00014755
Chr2	stalkie_big_nohaplotig	exon	10906743	10907121	97	-	.	Parent=comp146567_c0_seq1.mrna1;Target=comp146567_c0_seq1 1 376 -
Chr2	stalkie_big_nohaplotig	exon	10907182	10907242	100	-	.	Parent=comp146567_c0_seq1.mrna1;Target=comp146567_c0_seq1 377 437 -
Chr2	stalkie_big_nohaplotig	exon	10907301	10907463	95	-	.	Parent=comp146567_c0_seq1.mrna1;Target=comp146567_c0_seq1 438 607 -
Chr2	stalkie_big_nohaplotig	CDS	10906996	10907121	.	-	0	Parent=comp146567_c0_seq1.mrna1;Target=comp146567_c0_seq1 251 376 .
Chr2	stalkie_big_nohaplotig	CDS	10907182	10907242	.	-	1	Parent=comp146567_c0_seq1.mrna1;Target=comp146567_c0_seq1 377 437 .
Chr2	stalkie_big_nohaplotig	CDS	10907301	10907386	.	-	0	Parent=comp146567_c0_seq1.mrna1;Target=comp146567_c0_seq1 438 529 .
Chr2	gffcl	locus	10908798	10910102	.	-	.	ID=RLOC_00014756;geneIDs=comp144185_c0_seq1.path1;transcripts=comp144185_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10908798	10910102	.	-	.	ID=comp144185_c0_seq1.mrna1;geneID=comp144185_c0_seq1.path1;Name=comp144185_c0_seq1;Dir=sensecoverage=97.6;identity=99.5;matches=602;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014756
Chr2	stalkie_big_nohaplotig	exon	10908798	10909016	100	-	.	Parent=comp144185_c0_seq1.mrna1;Target=comp144185_c0_seq1 387 605 +
Chr2	stalkie_big_nohaplotig	exon	10909657	10909717	100	-	.	Parent=comp144185_c0_seq1.mrna1;Target=comp144185_c0_seq1 326 386 +
Chr2	stalkie_big_nohaplotig	exon	10909778	10910102	99	-	.	Parent=comp144185_c0_seq1.mrna1;Target=comp144185_c0_seq1 1 325 +
Chr2	stalkie_big_nohaplotig	CDS	10908870	10909016	.	-	0	Parent=comp144185_c0_seq1.mrna1;Target=comp144185_c0_seq1 387 533 +
Chr2	stalkie_big_nohaplotig	CDS	10909657	10909717	.	-	1	Parent=comp144185_c0_seq1.mrna1;Target=comp144185_c0_seq1 326 386 +
Chr2	stalkie_big_nohaplotig	CDS	10909778	10909860	.	-	0	Parent=comp144185_c0_seq1.mrna1;Target=comp144185_c0_seq1 243 325 +
Chr2	gffcl	locus	10911472	10911746	.	+	.	ID=RLOC_00014757;geneIDs=comp64494_c0_seq1.path1;transcripts=comp64494_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10911472	10911746	.	+	.	ID=comp64494_c0_seq1.mrna1;geneID=comp64494_c0_seq1.path1;Name=comp64494_c0_seq1;Dir=indeterminatecoverage=94.8;identity=98.9;matches=272;mismatches=3;indels=0;unknowns=0;Target=comp64494_c0_seq1 275 1 .;CDS_Target=comp64494_c0_seq1 266 81 .;locus=RLOC_00014757
Chr2	stalkie_big_nohaplotig	exon	10911472	10911746	98	+	.	Parent=comp64494_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10911552	10911737	.	+	0	Parent=comp64494_c0_seq1.mrna1
Chr2	gffcl	locus	10914062	10914344	.	-	.	ID=RLOC_00014758;geneIDs=comp88121_c1_seq1.path1;transcripts=comp88121_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10914062	10914344	.	-	.	ID=comp88121_c1_seq1.mrna1;geneID=comp88121_c1_seq1.path1;Name=comp88121_c1_seq1;Dir=indeterminatecoverage=100.0;identity=92.9;matches=263;mismatches=15;indels=5;unknowns=0;Target=comp88121_c1_seq1 278 1 .;CDS_Target=comp88121_c1_seq1 271 197 .;locus=RLOC_00014758
Chr2	stalkie_big_nohaplotig	exon	10914062	10914344	92	-	.	Parent=comp88121_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	10914069	10914143	.	-	0	Parent=comp88121_c1_seq1.mrna1
Chr2	gffcl	locus	10919389	10925259	.	+	.	ID=RLOC_00014759;geneIDs=FBgn0003977.1.path1;transcripts=FBgn0003977.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10919389	10925259	.	+	.	ID=FBgn0003977.1.mrna1;geneID=FBgn0003977.1.path1;Name=FBgn0003977.1;Dir=sensecoverage=100.0;identity=99.3;matches=5452;mismatches=38;indels=0;unknowns=0;locus=RLOC_00014759
Chr2	stalkie_big_nohaplotig	exon	10919389	10919469	100	+	.	Parent=FBgn0003977.1.mrna1;Target=FBgn0003977.1 1 81 +
Chr2	stalkie_big_nohaplotig	exon	10919537	10920198	99	+	.	Parent=FBgn0003977.1.mrna1;Target=FBgn0003977.1 82 743 +
Chr2	stalkie_big_nohaplotig	exon	10920258	10921846	99	+	.	Parent=FBgn0003977.1.mrna1;Target=FBgn0003977.1 744 2332 +
Chr2	stalkie_big_nohaplotig	exon	10921906	10923180	99	+	.	Parent=FBgn0003977.1.mrna1;Target=FBgn0003977.1 2333 3607 +
Chr2	stalkie_big_nohaplotig	exon	10923252	10923948	99	+	.	Parent=FBgn0003977.1.mrna1;Target=FBgn0003977.1 3608 4304 +
Chr2	stalkie_big_nohaplotig	exon	10924007	10925020	99	+	.	Parent=FBgn0003977.1.mrna1;Target=FBgn0003977.1 4305 5318 +
Chr2	stalkie_big_nohaplotig	exon	10925088	10925259	98	+	.	Parent=FBgn0003977.1.mrna1;Target=FBgn0003977.1 5319 5490 +
Chr2	stalkie_big_nohaplotig	CDS	10919389	10919469	.	+	0	Parent=FBgn0003977.1.mrna1;Target=FBgn0003977.1 1 81 +
Chr2	stalkie_big_nohaplotig	CDS	10919537	10920198	.	+	0	Parent=FBgn0003977.1.mrna1;Target=FBgn0003977.1 82 743 +
Chr2	stalkie_big_nohaplotig	CDS	10920258	10921846	.	+	1	Parent=FBgn0003977.1.mrna1;Target=FBgn0003977.1 744 2332 +
Chr2	stalkie_big_nohaplotig	CDS	10921906	10923180	.	+	2	Parent=FBgn0003977.1.mrna1;Target=FBgn0003977.1 2333 3607 +
Chr2	stalkie_big_nohaplotig	CDS	10923252	10923948	.	+	2	Parent=FBgn0003977.1.mrna1;Target=FBgn0003977.1 3608 4304 +
Chr2	stalkie_big_nohaplotig	CDS	10924007	10925020	.	+	1	Parent=FBgn0003977.1.mrna1;Target=FBgn0003977.1 4305 5318 +
Chr2	stalkie_big_nohaplotig	CDS	10925088	10925259	.	+	1	Parent=FBgn0003977.1.mrna1;Target=FBgn0003977.1 5319 5490 +
Chr2	gffcl	locus	10925987	10927707	.	-	.	ID=RLOC_00014760;geneIDs=FBgn0085453.1.path1;transcripts=FBgn0085453.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10925987	10927707	.	-	.	ID=FBgn0085453.1.mrna1;geneID=FBgn0085453.1.path1;Name=FBgn0085453.1;Dir=sensecoverage=100.0;identity=98.7;matches=604;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014760
Chr2	stalkie_big_nohaplotig	exon	10925987	10926213	99	-	.	Parent=FBgn0085453.1.mrna1;Target=FBgn0085453.1 386 612 +
Chr2	stalkie_big_nohaplotig	exon	10927259	10927514	98	-	.	Parent=FBgn0085453.1.mrna1;Target=FBgn0085453.1 130 385 +
Chr2	stalkie_big_nohaplotig	exon	10927579	10927707	98	-	.	Parent=FBgn0085453.1.mrna1;Target=FBgn0085453.1 1 129 +
Chr2	stalkie_big_nohaplotig	CDS	10925987	10926213	.	-	2	Parent=FBgn0085453.1.mrna1;Target=FBgn0085453.1 386 612 +
Chr2	stalkie_big_nohaplotig	CDS	10927259	10927514	.	-	0	Parent=FBgn0085453.1.mrna1;Target=FBgn0085453.1 130 385 +
Chr2	stalkie_big_nohaplotig	CDS	10927579	10927707	.	-	0	Parent=FBgn0085453.1.mrna1;Target=FBgn0085453.1 1 129 +
Chr2	gffcl	locus	10928162	10929099	.	-	.	ID=RLOC_00014761;geneIDs=comp126431_c0_seq1.path1;transcripts=comp126431_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10928162	10929099	.	-	.	ID=comp126431_c0_seq1.mrna1;geneID=comp126431_c0_seq1.path1;Name=comp126431_c0_seq1;Dir=antisensecoverage=93.1;identity=100.0;matches=766;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014761
Chr2	stalkie_big_nohaplotig	exon	10928162	10928419	100	-	.	Parent=comp126431_c0_seq1.mrna1;Target=comp126431_c0_seq1 58 315 -
Chr2	stalkie_big_nohaplotig	exon	10928491	10928629	100	-	.	Parent=comp126431_c0_seq1.mrna1;Target=comp126431_c0_seq1 316 454 -
Chr2	stalkie_big_nohaplotig	exon	10928731	10929099	100	-	.	Parent=comp126431_c0_seq1.mrna1;Target=comp126431_c0_seq1 455 823 -
Chr2	stalkie_big_nohaplotig	CDS	10928357	10928419	.	-	0	Parent=comp126431_c0_seq1.mrna1;Target=comp126431_c0_seq1 253 315 .
Chr2	stalkie_big_nohaplotig	CDS	10928491	10928629	.	-	1	Parent=comp126431_c0_seq1.mrna1;Target=comp126431_c0_seq1 316 454 .
Chr2	stalkie_big_nohaplotig	CDS	10928731	10928774	.	-	0	Parent=comp126431_c0_seq1.mrna1;Target=comp126431_c0_seq1 455 498 .
Chr2	gffcl	locus	10929472	10930934	.	-	.	ID=RLOC_00014762;geneIDs=comp162116_c1_seq1.path1;transcripts=comp162116_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	10929472	10930934	.	-	.	ID=comp162116_c1_seq1.mrna1;geneID=comp162116_c1_seq1.path1;Name=comp162116_c1_seq1;Dir=sensecoverage=38.6;identity=99.4;matches=770;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014762
Chr2	stalkie_big_nohaplotig	exon	10929472	10929828	99	-	.	Parent=comp162116_c1_seq1.mrna1;Target=comp162116_c1_seq1 442 798 +
Chr2	stalkie_big_nohaplotig	exon	10929890	10930157	99	-	.	Parent=comp162116_c1_seq1.mrna1;Target=comp162116_c1_seq1 174 441 +
Chr2	stalkie_big_nohaplotig	exon	10930785	10930934	99	-	.	Parent=comp162116_c1_seq1.mrna1;Target=comp162116_c1_seq1 24 173 +
Chr2	stalkie_big_nohaplotig	CDS	10929712	10929828	.	-	0	Parent=comp162116_c1_seq1.mrna1;Target=comp162116_c1_seq1 442 558 +
Chr2	stalkie_big_nohaplotig	CDS	10929890	10930157	.	-	1	Parent=comp162116_c1_seq1.mrna1;Target=comp162116_c1_seq1 174 441 +
Chr2	stalkie_big_nohaplotig	CDS	10930785	10930840	.	-	0	Parent=comp162116_c1_seq1.mrna1;Target=comp162116_c1_seq1 118 173 +
Chr2	gffcl	locus	11046051	11046665	.	-	.	ID=RLOC_00014763;geneIDs=comp131845_c2_seq1.path1;transcripts=comp131845_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11046051	11046665	.	-	.	ID=comp131845_c2_seq1.mrna1;geneID=comp131845_c2_seq1.path1;Name=comp131845_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=614;mismatches=1;indels=0;unknowns=0;Target=comp131845_c2_seq1 615 1 .;CDS_Target=comp131845_c2_seq1 355 158 .;locus=RLOC_00014763
Chr2	stalkie_big_nohaplotig	exon	11046051	11046665	99	-	.	Parent=comp131845_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11046311	11046508	.	-	0	Parent=comp131845_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11072239	11074426	.	+	.	ID=comp143455_c0_seq1.mrna1;geneID=comp143455_c0_seq1.path1;Name=comp143455_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=351;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014764
Chr2	stalkie_big_nohaplotig	exon	11072239	11072261	100	+	.	Parent=comp143455_c0_seq1.mrna1;Target=comp143455_c0_seq1 331 353 -
Chr2	stalkie_big_nohaplotig	exon	11074097	11074426	99	+	.	Parent=comp143455_c0_seq1.mrna1;Target=comp143455_c0_seq1 1 330 -
Chr2	stalkie_big_nohaplotig	CDS	11072239	11072261	.	+	0	Parent=comp143455_c0_seq1.mrna1;Target=comp143455_c0_seq1 331 353 .
Chr2	stalkie_big_nohaplotig	CDS	11074097	11074247	.	+	1	Parent=comp143455_c0_seq1.mrna1;Target=comp143455_c0_seq1 180 330 .
Chr2	gffcl	locus	11078317	11078649	.	+	.	ID=RLOC_00014765;geneIDs=comp143455_c0_seq1.path2;transcripts=comp143455_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	11078317	11078649	.	+	.	ID=comp143455_c0_seq1.mrna2;geneID=comp143455_c0_seq1.path2;Name=comp143455_c0_seq1;Dir=indeterminatecoverage=94.3;identity=99.4;matches=331;mismatches=2;indels=0;unknowns=0;Target=comp143455_c0_seq1 333 1 .;CDS_Target=comp143455_c0_seq1 332 207 .;locus=RLOC_00014765
Chr2	stalkie_big_nohaplotig	exon	11078317	11078649	99	+	.	Parent=comp143455_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	11078523	11078648	.	+	0	Parent=comp143455_c0_seq1.mrna2
Chr2	gffcl	locus	11176495	11177168	.	-	.	ID=RLOC_00014766;geneIDs=comp151097_c0_seq1.path1;transcripts=comp151097_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11176495	11177168	.	-	.	ID=comp151097_c0_seq1.mrna1;geneID=comp151097_c0_seq1.path1;Name=comp151097_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=667;mismatches=7;indels=0;unknowns=0;Target=comp151097_c0_seq1 674 1 .;CDS_Target=comp151097_c0_seq1 651 526 .;locus=RLOC_00014766
Chr2	stalkie_big_nohaplotig	exon	11176495	11177168	98	-	.	Parent=comp151097_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11176518	11176643	.	-	0	Parent=comp151097_c0_seq1.mrna1
Chr2	gffcl	locus	11198962	11205369	.	-	.	ID=RLOC_00014767;geneIDs=comp146399_c0_seq1.path1;transcripts=comp146399_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11198962	11205369	.	-	.	ID=comp146399_c0_seq1.mrna1;geneID=comp146399_c0_seq1.path1;Name=comp146399_c0_seq1;Dir=antisensecoverage=99.6;identity=98.1;matches=774;mismatches=7;indels=8;unknowns=0;Target=comp146399_c0_seq1 205 387 .;locus=RLOC_00014767
Chr2	stalkie_big_nohaplotig	exon	11198962	11199519	98	-	.	Parent=comp146399_c0_seq1.mrna1;Target=comp146399_c0_seq1 4 567 -
Chr2	stalkie_big_nohaplotig	exon	11205145	11205369	98	-	.	Parent=comp146399_c0_seq1.mrna1;Target=comp146399_c0_seq1 568 790 -
Chr2	stalkie_big_nohaplotig	CDS	11199163	11199342	.	-	0	Parent=comp146399_c0_seq1.mrna1
Chr2	gffcl	locus	11244866	11246564	.	+	.	ID=RLOC_00014768;geneIDs=comp152287_c0_seq1.path2;transcripts=comp152287_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	11244866	11246564	.	+	.	ID=comp152287_c0_seq1.mrna2;geneID=comp152287_c0_seq1.path2;Name=comp152287_c0_seq1;Dir=sensecoverage=100.0;identity=96.7;matches=437;mismatches=13;indels=2;unknowns=0;Target=comp152287_c0_seq1 3 5 +;locus=RLOC_00014768
Chr2	stalkie_big_nohaplotig	exon	11244866	11245182	95	+	.	Parent=comp152287_c0_seq1.mrna2;Target=comp152287_c0_seq1 1 319 +
Chr2	stalkie_big_nohaplotig	exon	11246432	11246564	98	+	.	Parent=comp152287_c0_seq1.mrna2;Target=comp152287_c0_seq1 320 452 +
Chr2	stalkie_big_nohaplotig	CDS	11244868	11244870	.	+	0	Parent=comp152287_c0_seq1.mrna2
Chr2	gffcl	locus	11249483	13200297	.	+	.	ID=RLOC_00014769;geneIDs=comp147930_c0_seq1.path1;transcripts=comp147930_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11249483	13200297	.	+	.	ID=comp147930_c0_seq1.mrna1;geneID=comp147930_c0_seq1.path1;Name=comp147930_c0_seq1;Dir=indeterminatecoverage=82.7;identity=100.0;matches=177;mismatches=0;indels=0;unknowns=0;Target=comp147930_c0_seq1 28 2 .;locus=RLOC_00014769
Chr2	stalkie_big_nohaplotig	exon	11249483	11249615	100	+	.	Parent=comp147930_c0_seq1.mrna1;Target=comp147930_c0_seq1 133 1 .
Chr2	stalkie_big_nohaplotig	exon	13141556	13141559	100	+	.	Parent=comp147930_c0_seq1.mrna1;Target=comp147930_c0_seq1 137 134 .
Chr2	stalkie_big_nohaplotig	exon	13170968	13170978	100	+	.	Parent=comp147930_c0_seq1.mrna1;Target=comp147930_c0_seq1 148 138 .
Chr2	stalkie_big_nohaplotig	exon	13179947	13179953	100	+	.	Parent=comp147930_c0_seq1.mrna1;Target=comp147930_c0_seq1 155 149 .
Chr2	stalkie_big_nohaplotig	exon	13183760	13183767	100	+	.	Parent=comp147930_c0_seq1.mrna1;Target=comp147930_c0_seq1 163 156 .
Chr2	stalkie_big_nohaplotig	exon	13193809	13193813	100	+	.	Parent=comp147930_c0_seq1.mrna1;Target=comp147930_c0_seq1 168 164 .
Chr2	stalkie_big_nohaplotig	exon	13200289	13200297	100	+	.	Parent=comp147930_c0_seq1.mrna1;Target=comp147930_c0_seq1 177 169 .
Chr2	stalkie_big_nohaplotig	CDS	11249484	11249510	.	+	0	Parent=comp147930_c0_seq1.mrna1
Chr2	gffcl	locus	11251399	11251998	.	-	.	ID=RLOC_00014770;geneIDs=comp151147_c0_seq1.path2;transcripts=comp151147_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	11251399	11251998	.	-	.	ID=comp151147_c0_seq1.mrna2;geneID=comp151147_c0_seq1.path2;Name=comp151147_c0_seq1;Dir=indeterminatecoverage=99.3;identity=97.9;matches=592;mismatches=3;indels=10;unknowns=0;Target=comp151147_c0_seq1 604 5 .;CDS_Target=comp151147_c0_seq1 186 76 .;locus=RLOC_00014770
Chr2	stalkie_big_nohaplotig	exon	11251399	11251998	97	-	.	Parent=comp151147_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	11251817	11251927	.	-	0	Parent=comp151147_c0_seq1.mrna2
Chr2	gffcl	locus	11252135	11257669	.	+	.	ID=RLOC_00014771;geneIDs=comp153255_c0_seq1.path1;transcripts=comp153255_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11252135	11257669	.	+	.	ID=comp153255_c0_seq1.mrna1;geneID=comp153255_c0_seq1.path1;Name=comp153255_c0_seq1;Dir=sensecoverage=100.0;identity=95.1;matches=602;mismatches=23;indels=8;unknowns=0;locus=RLOC_00014771
Chr2	stalkie_big_nohaplotig	exon	11252135	11252270	95	+	.	Parent=comp153255_c0_seq1.mrna1;Target=comp153255_c0_seq1 1 136 +
Chr2	stalkie_big_nohaplotig	exon	11257121	11257563	94	+	.	Parent=comp153255_c0_seq1.mrna1;Target=comp153255_c0_seq1 137 585 +
Chr2	stalkie_big_nohaplotig	exon	11257623	11257669	100	+	.	Parent=comp153255_c0_seq1.mrna1;Target=comp153255_c0_seq1 586 632 +
Chr2	stalkie_big_nohaplotig	CDS	11252182	11252270	.	+	0	Parent=comp153255_c0_seq1.mrna1;Target=comp153255_c0_seq1 48 136 +
Chr2	stalkie_big_nohaplotig	CDS	11257121	11257163	.	+	1	Parent=comp153255_c0_seq1.mrna1;Target=comp153255_c0_seq1 137 179 +
Chr2	gffcl	locus	11264219	11264905	.	+	.	ID=RLOC_00014772;geneIDs=comp62656_c0_seq1.path1;transcripts=comp62656_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11264219	11264905	.	+	.	ID=comp62656_c0_seq1.mrna1;geneID=comp62656_c0_seq1.path1;Name=comp62656_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=684;mismatches=0;indels=3;unknowns=0;Target=comp62656_c0_seq1 684 1 .;CDS_Target=comp62656_c0_seq1 499 335 .;locus=RLOC_00014772
Chr2	stalkie_big_nohaplotig	exon	11264219	11264905	99	+	.	Parent=comp62656_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11264556	11264720	.	+	0	Parent=comp62656_c0_seq1.mrna1
Chr2	gffcl	locus	11393328	11409492	.	-	.	ID=RLOC_00014774;geneIDs=FBgn0263116.1.path1;transcripts=FBgn0263116.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11393328	11409492	.	-	.	ID=FBgn0263116.1.mrna1;geneID=FBgn0263116.1.path1;Name=FBgn0263116.1;Dir=sensecoverage=99.9;identity=99.7;matches=1557;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014774
Chr2	stalkie_big_nohaplotig	exon	11393328	11393821	99	-	.	Parent=FBgn0263116.1.mrna1;Target=FBgn0263116.1 1069 1562 +
Chr2	stalkie_big_nohaplotig	exon	11393966	11394166	100	-	.	Parent=FBgn0263116.1.mrna1;Target=FBgn0263116.1 868 1068 +
Chr2	stalkie_big_nohaplotig	exon	11397808	11397945	99	-	.	Parent=FBgn0263116.1.mrna1;Target=FBgn0263116.1 730 867 +
Chr2	stalkie_big_nohaplotig	exon	11398289	11398478	99	-	.	Parent=FBgn0263116.1.mrna1;Target=FBgn0263116.1 540 729 +
Chr2	stalkie_big_nohaplotig	exon	11401845	11401954	100	-	.	Parent=FBgn0263116.1.mrna1;Target=FBgn0263116.1 430 539 +
Chr2	stalkie_big_nohaplotig	exon	11404407	11404540	100	-	.	Parent=FBgn0263116.1.mrna1;Target=FBgn0263116.1 296 429 +
Chr2	stalkie_big_nohaplotig	exon	11409198	11409492	99	-	.	Parent=FBgn0263116.1.mrna1;Target=FBgn0263116.1 1 295 +
Chr2	stalkie_big_nohaplotig	CDS	11393330	11393821	.	-	0	Parent=FBgn0263116.1.mrna1;Target=FBgn0263116.1 1069 1560 +
Chr2	stalkie_big_nohaplotig	CDS	11393966	11394166	.	-	0	Parent=FBgn0263116.1.mrna1;Target=FBgn0263116.1 868 1068 +
Chr2	stalkie_big_nohaplotig	CDS	11397808	11397945	.	-	0	Parent=FBgn0263116.1.mrna1;Target=FBgn0263116.1 730 867 +
Chr2	stalkie_big_nohaplotig	CDS	11398289	11398478	.	-	1	Parent=FBgn0263116.1.mrna1;Target=FBgn0263116.1 540 729 +
Chr2	stalkie_big_nohaplotig	CDS	11401845	11401954	.	-	0	Parent=FBgn0263116.1.mrna1;Target=FBgn0263116.1 430 539 +
Chr2	stalkie_big_nohaplotig	CDS	11404407	11404540	.	-	2	Parent=FBgn0263116.1.mrna1;Target=FBgn0263116.1 296 429 +
Chr2	stalkie_big_nohaplotig	CDS	11409198	11409492	.	-	0	Parent=FBgn0263116.1.mrna1;Target=FBgn0263116.1 1 295 +
Chr2	gffcl	locus	11443994	11444782	.	+	.	ID=RLOC_00014775;geneIDs=FBgn0020238.8.path1;transcripts=FBgn0020238.8.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11443994	11444782	.	+	.	ID=FBgn0020238.8.mrna1;geneID=FBgn0020238.8.path1;Name=FBgn0020238.8;Dir=indeterminatecoverage=100.0;identity=99.2;matches=783;mismatches=6;indels=0;unknowns=0;Target=FBgn0020238.8 789 1 .;locus=RLOC_00014775
Chr2	stalkie_big_nohaplotig	exon	11443994	11444782	99	+	.	Parent=FBgn0020238.8.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11443994	11444782	.	+	0	Parent=FBgn0020238.8.mrna1
Chr2	gffcl	locus	11445796	11446794	.	+	.	ID=RLOC_00014776;geneIDs=comp154532_c0_seq1.path1;transcripts=comp154532_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11445796	11446794	.	+	.	ID=comp154532_c0_seq1.mrna1;geneID=comp154532_c0_seq1.path1;Name=comp154532_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=982;mismatches=17;indels=2;unknowns=0;Target=comp154532_c0_seq1 1001 1 .;CDS_Target=comp154532_c0_seq1 836 129 .;locus=RLOC_00014776
Chr2	stalkie_big_nohaplotig	exon	11445796	11446794	98	+	.	Parent=comp154532_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11445922	11446629	.	+	0	Parent=comp154532_c0_seq1.mrna1
Chr2	gffcl	locus	11559835	11560708	.	-	.	ID=RLOC_00014777;geneIDs=comp150856_c0_seq1.path1;transcripts=comp150856_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11559835	11560708	.	-	.	ID=comp150856_c0_seq1.mrna1;geneID=comp150856_c0_seq1.path1;Name=comp150856_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=544;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014777
Chr2	stalkie_big_nohaplotig	exon	11559835	11560077	98	-	.	Parent=comp150856_c0_seq1.mrna1;Target=comp150856_c0_seq1 1 243 -
Chr2	stalkie_big_nohaplotig	exon	11560164	11560354	99	-	.	Parent=comp150856_c0_seq1.mrna1;Target=comp150856_c0_seq1 244 434 -
Chr2	stalkie_big_nohaplotig	exon	11560593	11560708	98	-	.	Parent=comp150856_c0_seq1.mrna1;Target=comp150856_c0_seq1 435 550 -
Chr2	stalkie_big_nohaplotig	CDS	11560319	11560354	.	-	0	Parent=comp150856_c0_seq1.mrna1;Target=comp150856_c0_seq1 399 434 .
Chr2	stalkie_big_nohaplotig	CDS	11560593	11560706	.	-	0	Parent=comp150856_c0_seq1.mrna1;Target=comp150856_c0_seq1 435 548 .
Chr2	gffcl	locus	11569141	11570481	.	-	.	ID=RLOC_00014778;geneIDs=comp1032636_c0_seq1.path1;transcripts=comp1032636_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11569141	11570481	.	-	.	ID=comp1032636_c0_seq1.mrna1;geneID=comp1032636_c0_seq1.path1;Name=comp1032636_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.5;matches=1328;mismatches=6;indels=14;unknowns=0;Target=comp1032636_c0_seq1 1341 1 .;CDS_Target=comp1032636_c0_seq1 147 1 .;locus=RLOC_00014778
Chr2	stalkie_big_nohaplotig	exon	11569141	11570481	98	-	.	Parent=comp1032636_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11570335	11570481	.	-	0	Parent=comp1032636_c0_seq1.mrna1
Chr2	gffcl	locus	11643147	11644840	.	+	.	ID=RLOC_00014780;geneIDs=FBgn0031528.1.path1;transcripts=FBgn0031528.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11643147	11644840	.	+	.	ID=FBgn0031528.1.mrna1;geneID=FBgn0031528.1.path1;Name=FBgn0031528.1;Dir=sensecoverage=99.9;identity=98.7;matches=1502;mismatches=14;indels=6;unknowns=0;locus=RLOC_00014780
Chr2	stalkie_big_nohaplotig	exon	11643147	11644442	98	+	.	Parent=FBgn0031528.1.mrna1;Target=FBgn0031528.1 3 1292 +
Chr2	stalkie_big_nohaplotig	exon	11644510	11644591	98	+	.	Parent=FBgn0031528.1.mrna1;Target=FBgn0031528.1 1293 1374 +
Chr2	stalkie_big_nohaplotig	exon	11644697	11644840	99	+	.	Parent=FBgn0031528.1.mrna1;Target=FBgn0031528.1 1375 1518 +
Chr2	stalkie_big_nohaplotig	CDS	11643148	11644442	.	+	0	Parent=FBgn0031528.1.mrna1;Target=FBgn0031528.1 4 1292 +
Chr2	stalkie_big_nohaplotig	CDS	11644510	11644591	.	+	1	Parent=FBgn0031528.1.mrna1;Target=FBgn0031528.1 1293 1374 +
Chr2	stalkie_big_nohaplotig	CDS	11644697	11644840	.	+	0	Parent=FBgn0031528.1.mrna1;Target=FBgn0031528.1 1375 1518 +
Chr2	gffcl	locus	11647360	11648079	.	-	.	ID=RLOC_00014781;geneIDs=comp131484_c0_seq1.path1;transcripts=comp131484_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11647360	11648079	.	-	.	ID=comp131484_c0_seq1.mrna1;geneID=comp131484_c0_seq1.path1;Name=comp131484_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.9;matches=705;mismatches=15;indels=0;unknowns=0;Target=comp131484_c0_seq1 721 2 .;CDS_Target=comp131484_c0_seq1 233 135 .;locus=RLOC_00014781
Chr2	stalkie_big_nohaplotig	exon	11647360	11648079	97	-	.	Parent=comp131484_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11647848	11647946	.	-	0	Parent=comp131484_c0_seq1.mrna1
Chr2	gffcl	locus	11698946	11700580	.	+	.	ID=RLOC_00014782;geneIDs=FBgn0003889.2.path1;transcripts=FBgn0003889.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11698946	11700580	.	+	.	ID=FBgn0003889.2.mrna1;geneID=FBgn0003889.2.path1;Name=FBgn0003889.2;Dir=sensecoverage=100.0;identity=99.6;matches=1333;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014782
Chr2	stalkie_big_nohaplotig	exon	11698946	11699350	100	+	.	Parent=FBgn0003889.2.mrna1;Target=FBgn0003889.2 1 405 +
Chr2	stalkie_big_nohaplotig	exon	11699648	11700580	99	+	.	Parent=FBgn0003889.2.mrna1;Target=FBgn0003889.2 406 1338 +
Chr2	stalkie_big_nohaplotig	CDS	11698946	11699350	.	+	0	Parent=FBgn0003889.2.mrna1;Target=FBgn0003889.2 1 405 +
Chr2	stalkie_big_nohaplotig	CDS	11699648	11700580	.	+	0	Parent=FBgn0003889.2.mrna1;Target=FBgn0003889.2 406 1338 +
Chr2	gffcl	locus	11701650	11737944	.	-	.	ID=RLOC_00014783;geneIDs=FBgn0034412.1.path1,comp110364_c0_seq1.path1;transcripts=FBgn0034412.1.mrna1,comp110364_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11701650	11729553	.	-	.	ID=FBgn0034412.1.mrna1;geneID=FBgn0034412.1.path1;Name=FBgn0034412.1;Dir=sensecoverage=100.0;identity=99.5;matches=3967;mismatches=14;indels=6;unknowns=0;locus=RLOC_00014783
Chr2	stalkie_big_nohaplotig	exon	11701650	11701860	100	-	.	Parent=FBgn0034412.1.mrna1;Target=FBgn0034412.1 3774 3984 +
Chr2	stalkie_big_nohaplotig	exon	11703077	11703153	100	-	.	Parent=FBgn0034412.1.mrna1;Target=FBgn0034412.1 3697 3773 +
Chr2	stalkie_big_nohaplotig	exon	11703323	11703463	100	-	.	Parent=FBgn0034412.1.mrna1;Target=FBgn0034412.1 3556 3696 +
Chr2	stalkie_big_nohaplotig	exon	11703977	11704136	100	-	.	Parent=FBgn0034412.1.mrna1;Target=FBgn0034412.1 3396 3555 +
Chr2	stalkie_big_nohaplotig	exon	11705718	11706437	98	-	.	Parent=FBgn0034412.1.mrna1;Target=FBgn0034412.1 2676 3395 +
Chr2	stalkie_big_nohaplotig	exon	11709123	11709401	100	-	.	Parent=FBgn0034412.1.mrna1;Target=FBgn0034412.1 2397 2675 +
Chr2	stalkie_big_nohaplotig	exon	11718198	11718832	99	-	.	Parent=FBgn0034412.1.mrna1;Target=FBgn0034412.1 1762 2396 +
Chr2	stalkie_big_nohaplotig	exon	11722216	11723559	99	-	.	Parent=FBgn0034412.1.mrna1;Target=FBgn0034412.1 418 1761 +
Chr2	stalkie_big_nohaplotig	exon	11723621	11723763	99	-	.	Parent=FBgn0034412.1.mrna1;Target=FBgn0034412.1 275 417 +
Chr2	stalkie_big_nohaplotig	exon	11725166	11725301	100	-	.	Parent=FBgn0034412.1.mrna1;Target=FBgn0034412.1 139 274 +
Chr2	stalkie_big_nohaplotig	exon	11729416	11729553	100	-	.	Parent=FBgn0034412.1.mrna1;Target=FBgn0034412.1 1 138 +
Chr2	stalkie_big_nohaplotig	CDS	11701650	11701860	.	-	1	Parent=FBgn0034412.1.mrna1;Target=FBgn0034412.1 3774 3984 +
Chr2	stalkie_big_nohaplotig	CDS	11703077	11703153	.	-	0	Parent=FBgn0034412.1.mrna1;Target=FBgn0034412.1 3697 3773 +
Chr2	stalkie_big_nohaplotig	CDS	11703323	11703463	.	-	0	Parent=FBgn0034412.1.mrna1;Target=FBgn0034412.1 3556 3696 +
Chr2	stalkie_big_nohaplotig	CDS	11703977	11704136	.	-	1	Parent=FBgn0034412.1.mrna1;Target=FBgn0034412.1 3396 3555 +
Chr2	stalkie_big_nohaplotig	CDS	11705718	11706437	.	-	1	Parent=FBgn0034412.1.mrna1;Target=FBgn0034412.1 2676 3395 +
Chr2	stalkie_big_nohaplotig	CDS	11709123	11709401	.	-	1	Parent=FBgn0034412.1.mrna1;Target=FBgn0034412.1 2397 2675 +
Chr2	stalkie_big_nohaplotig	CDS	11718198	11718832	.	-	0	Parent=FBgn0034412.1.mrna1;Target=FBgn0034412.1 1762 2396 +
Chr2	stalkie_big_nohaplotig	CDS	11722216	11723559	.	-	0	Parent=FBgn0034412.1.mrna1;Target=FBgn0034412.1 418 1761 +
Chr2	stalkie_big_nohaplotig	CDS	11723621	11723763	.	-	2	Parent=FBgn0034412.1.mrna1;Target=FBgn0034412.1 275 417 +
Chr2	stalkie_big_nohaplotig	CDS	11725166	11725301	.	-	0	Parent=FBgn0034412.1.mrna1;Target=FBgn0034412.1 139 274 +
Chr2	stalkie_big_nohaplotig	CDS	11729416	11729553	.	-	0	Parent=FBgn0034412.1.mrna1;Target=FBgn0034412.1 1 138 +
Chr2	stalkie_big_nohaplotig	mRNA	11729533	11737944	.	-	.	ID=comp110364_c0_seq1.mrna1;geneID=comp110364_c0_seq1.path1;Name=comp110364_c0_seq1;Dir=antisensecoverage=95.8;identity=99.5;matches=381;mismatches=2;indels=0;unknowns=0;Target=comp110364_c0_seq1 170 235 .;locus=RLOC_00014783
Chr2	stalkie_big_nohaplotig	exon	11729533	11729556	100	-	.	Parent=comp110364_c0_seq1.mrna1;Target=comp110364_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	exon	11737586	11737944	99	-	.	Parent=comp110364_c0_seq1.mrna1;Target=comp110364_c0_seq1 25 383 -
Chr2	stalkie_big_nohaplotig	CDS	11737731	11737796	.	-	0	Parent=comp110364_c0_seq1.mrna1
Chr2	gffcl	locus	11701887	11702960	.	-	.	ID=RLOC_00014784;geneIDs=comp160218_c0_seq1.path1;transcripts=comp160218_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11701887	11702960	.	-	.	ID=comp160218_c0_seq1.mrna1;geneID=comp160218_c0_seq1.path1;Name=comp160218_c0_seq1;Dir=indeterminatecoverage=99.8;identity=88.4;matches=957;mismatches=94;indels=31;unknowns=0;Target=comp160218_c0_seq1 1061 3 .;CDS_Target=comp160218_c0_seq1 657 637 .;locus=RLOC_00014784
Chr2	stalkie_big_nohaplotig	exon	11701887	11702960	88	-	.	Parent=comp160218_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11702312	11702332	.	-	0	Parent=comp160218_c0_seq1.mrna1
Chr2	gffcl	locus	11706882	11707253	.	+	.	ID=RLOC_00014785;geneIDs=comp105034_c0_seq1.path1;transcripts=comp105034_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11706882	11707253	.	+	.	ID=comp105034_c0_seq1.mrna1;geneID=comp105034_c0_seq1.path1;Name=comp105034_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.3;matches=347;mismatches=25;indels=0;unknowns=0;Target=comp105034_c0_seq1 372 1 .;CDS_Target=comp105034_c0_seq1 48 1 .;locus=RLOC_00014785
Chr2	stalkie_big_nohaplotig	exon	11706882	11707253	93	+	.	Parent=comp105034_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11706882	11706929	.	+	0	Parent=comp105034_c0_seq1.mrna1
Chr2	gffcl	locus	11710478	11710748	.	+	.	ID=RLOC_00014786;geneIDs=comp72294_c0_seq1.path1;transcripts=comp72294_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11710478	11710748	.	+	.	ID=comp72294_c0_seq1.mrna1;geneID=comp72294_c0_seq1.path1;Name=comp72294_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=271;mismatches=0;indels=0;unknowns=0;Target=comp72294_c0_seq1 271 1 .;CDS_Target=comp72294_c0_seq1 64 2 .;locus=RLOC_00014786
Chr2	stalkie_big_nohaplotig	exon	11710478	11710748	100	+	.	Parent=comp72294_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11710479	11710541	.	+	0	Parent=comp72294_c0_seq1.mrna1
Chr2	gffcl	locus	11711544	11712186	.	+	.	ID=RLOC_00014787;geneIDs=comp152256_c0_seq1.path1;transcripts=comp152256_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11711544	11712186	.	+	.	ID=comp152256_c0_seq1.mrna1;geneID=comp152256_c0_seq1.path1;Name=comp152256_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.6;matches=629;mismatches=14;indels=8;unknowns=0;Target=comp152256_c0_seq1 651 1 .;CDS_Target=comp152256_c0_seq1 122 3 .;locus=RLOC_00014787
Chr2	stalkie_big_nohaplotig	exon	11711544	11712186	96	+	.	Parent=comp152256_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11711546	11711665	.	+	0	Parent=comp152256_c0_seq1.mrna1
Chr2	gffcl	locus	11712280	11713462	.	+	.	ID=RLOC_00014788;geneIDs=comp160001_c1_seq1.path1;transcripts=comp160001_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11712280	11713462	.	+	.	ID=comp160001_c1_seq1.mrna1;geneID=comp160001_c1_seq1.path1;Name=comp160001_c1_seq1;Dir=indeterminatecoverage=90.0;identity=92.4;matches=1117;mismatches=42;indels=50;unknowns=0;Target=comp160001_c1_seq1 1185 1 .;CDS_Target=comp160001_c1_seq1 1178 1059 .;locus=RLOC_00014788
Chr2	stalkie_big_nohaplotig	exon	11712280	11713462	92	+	.	Parent=comp160001_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11713335	11713455	.	+	0	Parent=comp160001_c1_seq1.mrna1
Chr2	gffcl	locus	11713557	11714282	.	-	.	ID=RLOC_00014789;geneIDs=comp151289_c0_seq1.path1;transcripts=comp151289_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11713557	11714282	.	-	.	ID=comp151289_c0_seq1.mrna1;geneID=comp151289_c0_seq1.path1;Name=comp151289_c0_seq1;Dir=indeterminatecoverage=97.6;identity=92.4;matches=671;mismatches=24;indels=31;unknowns=0;Target=comp151289_c0_seq1 710 16 .;CDS_Target=comp151289_c0_seq1 156 16 .;locus=RLOC_00014789
Chr2	stalkie_big_nohaplotig	exon	11713557	11714282	92	-	.	Parent=comp151289_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11714142	11714282	.	-	0	Parent=comp151289_c0_seq1.mrna1
Chr2	gffcl	locus	11715072	11716013	.	+	.	ID=RLOC_00014790;geneIDs=comp152503_c0_seq1.path1;transcripts=comp152503_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11715072	11716013	.	+	.	ID=comp152503_c0_seq1.mrna1;geneID=comp152503_c0_seq1.path1;Name=comp152503_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.3;matches=907;mismatches=10;indels=25;unknowns=0;Target=comp152503_c0_seq1 917 1 .;CDS_Target=comp152503_c0_seq1 162 40 .;locus=RLOC_00014790
Chr2	stalkie_big_nohaplotig	exon	11715072	11716013	96	+	.	Parent=comp152503_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11715111	11715233	.	+	0	Parent=comp152503_c0_seq1.mrna1
Chr2	gffcl	locus	11718894	11719140	.	-	.	ID=RLOC_00014791;geneIDs=comp80504_c0_seq1.path1;transcripts=comp80504_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11718894	11719140	.	-	.	ID=comp80504_c0_seq1.mrna1;geneID=comp80504_c0_seq1.path1;Name=comp80504_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=246;mismatches=1;indels=0;unknowns=0;Target=comp80504_c0_seq1 247 1 .;CDS_Target=comp80504_c0_seq1 235 2 .;locus=RLOC_00014791
Chr2	stalkie_big_nohaplotig	exon	11718894	11719140	99	-	.	Parent=comp80504_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11718906	11719139	.	-	0	Parent=comp80504_c0_seq1.mrna1
Chr2	gffcl	locus	11719382	11720236	.	-	.	ID=RLOC_00014792;geneIDs=comp145564_c0_seq1.path1;transcripts=comp145564_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11719382	11720236	.	-	.	ID=comp145564_c0_seq1.mrna1;geneID=comp145564_c0_seq1.path1;Name=comp145564_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=846;mismatches=6;indels=4;unknowns=0;Target=comp145564_c0_seq1 853 1 .;CDS_Target=comp145564_c0_seq1 612 391 .;locus=RLOC_00014792
Chr2	stalkie_big_nohaplotig	exon	11719382	11720236	98	-	.	Parent=comp145564_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11719623	11719844	.	-	0	Parent=comp145564_c0_seq1.mrna1
Chr2	gffcl	locus	11739271	11741915	.	-	.	ID=RLOC_00014793;geneIDs=FBgn0028669.1.path1;transcripts=FBgn0028669.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11739271	11741915	.	-	.	ID=FBgn0028669.1.mrna1;geneID=FBgn0028669.1.path1;Name=FBgn0028669.1;Dir=sensecoverage=100.0;identity=99.7;matches=2576;mismatches=7;indels=0;unknowns=0;locus=RLOC_00014793
Chr2	stalkie_big_nohaplotig	exon	11739271	11739614	99	-	.	Parent=FBgn0028669.1.mrna1;Target=FBgn0028669.1 2240 2583 +
Chr2	stalkie_big_nohaplotig	exon	11739677	11741915	99	-	.	Parent=FBgn0028669.1.mrna1;Target=FBgn0028669.1 1 2239 +
Chr2	stalkie_big_nohaplotig	CDS	11739271	11739614	.	-	2	Parent=FBgn0028669.1.mrna1;Target=FBgn0028669.1 2240 2583 +
Chr2	stalkie_big_nohaplotig	CDS	11739677	11741915	.	-	0	Parent=FBgn0028669.1.mrna1;Target=FBgn0028669.1 1 2239 +
Chr2	gffcl	locus	11748867	11749159	.	+	.	ID=RLOC_00014794;geneIDs=comp4234_c0_seq1.path1;transcripts=comp4234_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11748867	11749159	.	+	.	ID=comp4234_c0_seq1.mrna1;geneID=comp4234_c0_seq1.path1;Name=comp4234_c0_seq1;Dir=indeterminatecoverage=91.8;identity=98.3;matches=288;mismatches=4;indels=1;unknowns=0;Target=comp4234_c0_seq1 318 27 .;CDS_Target=comp4234_c0_seq1 168 28 .;locus=RLOC_00014794
Chr2	stalkie_big_nohaplotig	exon	11748867	11749159	98	+	.	Parent=comp4234_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11748868	11749009	.	+	0	Parent=comp4234_c0_seq1.mrna1
Chr2	gffcl	locus	11755606	11756034	.	-	.	ID=RLOC_00014795;geneIDs=comp116101_c0_seq1.path1;transcripts=comp116101_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11755606	11756034	.	-	.	ID=comp116101_c0_seq1.mrna1;geneID=comp116101_c0_seq1.path1;Name=comp116101_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=308;mismatches=1;indels=0;unknowns=0;Target=comp116101_c0_seq1 259 309 .;locus=RLOC_00014795
Chr2	stalkie_big_nohaplotig	exon	11755606	11755650	97	-	.	Parent=comp116101_c0_seq1.mrna1;Target=comp116101_c0_seq1 1 45 -
Chr2	stalkie_big_nohaplotig	exon	11755771	11756034	100	-	.	Parent=comp116101_c0_seq1.mrna1;Target=comp116101_c0_seq1 46 309 -
Chr2	stalkie_big_nohaplotig	CDS	11755984	11756034	.	-	0	Parent=comp116101_c0_seq1.mrna1
Chr2	gffcl	locus	11770108	11775444	.	-	.	ID=RLOC_00014796;geneIDs=comp137890_c0_seq1.path1;transcripts=comp137890_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11770108	11775444	.	-	.	ID=comp137890_c0_seq1.mrna1;geneID=comp137890_c0_seq1.path1;Name=comp137890_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=321;mismatches=0;indels=0;unknowns=0;Target=comp137890_c0_seq1 86 202 +;locus=RLOC_00014796
Chr2	stalkie_big_nohaplotig	exon	11770108	11770404	100	-	.	Parent=comp137890_c0_seq1.mrna1;Target=comp137890_c0_seq1 25 321 +
Chr2	stalkie_big_nohaplotig	exon	11775421	11775444	100	-	.	Parent=comp137890_c0_seq1.mrna1;Target=comp137890_c0_seq1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	11770227	11770343	.	-	0	Parent=comp137890_c0_seq1.mrna1
Chr2	gffcl	locus	11772027	11773705	.	+	.	ID=RLOC_00014797;geneIDs=comp161909_c0_seq1.path1;transcripts=comp161909_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11772027	11773705	.	+	.	ID=comp161909_c0_seq1.mrna1;geneID=comp161909_c0_seq1.path1;Name=comp161909_c0_seq1;Dir=indeterminatecoverage=97.9;identity=94.3;matches=1624;mismatches=37;indels=62;unknowns=0;Target=comp161909_c0_seq1 1729 25 .;CDS_Target=comp161909_c0_seq1 1302 1126 .;locus=RLOC_00014797
Chr2	stalkie_big_nohaplotig	exon	11772027	11773705	94	+	.	Parent=comp161909_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11773125	11773301	.	+	0	Parent=comp161909_c0_seq1.mrna1
Chr2	gffcl	locus	11775491	11782195	.	-	.	ID=RLOC_00014798;geneIDs=FBgn0034410.1.path1;transcripts=FBgn0034410.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11775491	11782195	.	-	.	ID=FBgn0034410.1.mrna1;geneID=FBgn0034410.1.path1;Name=FBgn0034410.1;Dir=sensecoverage=100.0;identity=99.5;matches=2849;mismatches=13;indels=0;unknowns=0;locus=RLOC_00014798
Chr2	stalkie_big_nohaplotig	exon	11775491	11777465	99	-	.	Parent=FBgn0034410.1.mrna1;Target=FBgn0034410.1 888 2862 +
Chr2	stalkie_big_nohaplotig	exon	11777530	11777844	98	-	.	Parent=FBgn0034410.1.mrna1;Target=FBgn0034410.1 573 887 +
Chr2	stalkie_big_nohaplotig	exon	11781560	11781726	98	-	.	Parent=FBgn0034410.1.mrna1;Target=FBgn0034410.1 406 572 +
Chr2	stalkie_big_nohaplotig	exon	11781791	11782195	100	-	.	Parent=FBgn0034410.1.mrna1;Target=FBgn0034410.1 1 405 +
Chr2	stalkie_big_nohaplotig	CDS	11775491	11777465	.	-	1	Parent=FBgn0034410.1.mrna1;Target=FBgn0034410.1 888 2862 +
Chr2	stalkie_big_nohaplotig	CDS	11777530	11777844	.	-	1	Parent=FBgn0034410.1.mrna1;Target=FBgn0034410.1 573 887 +
Chr2	stalkie_big_nohaplotig	CDS	11781560	11781726	.	-	0	Parent=FBgn0034410.1.mrna1;Target=FBgn0034410.1 406 572 +
Chr2	stalkie_big_nohaplotig	CDS	11781791	11782195	.	-	0	Parent=FBgn0034410.1.mrna1;Target=FBgn0034410.1 1 405 +
Chr2	gffcl	locus	11802133	11803007	.	-	.	ID=RLOC_00014799;geneIDs=comp152546_c0_seq1.path1;transcripts=comp152546_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11802133	11803007	.	-	.	ID=comp152546_c0_seq1.mrna1;geneID=comp152546_c0_seq1.path1;Name=comp152546_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.1;matches=868;mismatches=7;indels=1;unknowns=0;Target=comp152546_c0_seq1 879 4 .;CDS_Target=comp152546_c0_seq1 545 405 .;locus=RLOC_00014799
Chr2	stalkie_big_nohaplotig	exon	11802133	11803007	99	-	.	Parent=comp152546_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11802466	11802606	.	-	0	Parent=comp152546_c0_seq1.mrna1
Chr2	gffcl	locus	11830138	11834180	.	-	.	ID=RLOC_00014800;geneIDs=FBgn0000241.1.path1;transcripts=FBgn0000241.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11830138	11834180	.	-	.	ID=FBgn0000241.1.mrna1;geneID=FBgn0000241.1.path1;Name=FBgn0000241.1;Dir=sensecoverage=100.0;identity=99.1;matches=1978;mismatches=16;indels=1;unknowns=0;locus=RLOC_00014800
Chr2	stalkie_big_nohaplotig	exon	11830138	11830322	100	-	.	Parent=FBgn0000241.1.mrna1;Target=FBgn0000241.1 1811 1995 +
Chr2	stalkie_big_nohaplotig	exon	11830388	11830946	97	-	.	Parent=FBgn0000241.1.mrna1;Target=FBgn0000241.1 1252 1810 +
Chr2	stalkie_big_nohaplotig	exon	11831013	11831118	99	-	.	Parent=FBgn0000241.1.mrna1;Target=FBgn0000241.1 1146 1251 +
Chr2	stalkie_big_nohaplotig	exon	11831431	11831607	100	-	.	Parent=FBgn0000241.1.mrna1;Target=FBgn0000241.1 969 1145 +
Chr2	stalkie_big_nohaplotig	exon	11832963	11833384	99	-	.	Parent=FBgn0000241.1.mrna1;Target=FBgn0000241.1 547 968 +
Chr2	stalkie_big_nohaplotig	exon	11833508	11833660	100	-	.	Parent=FBgn0000241.1.mrna1;Target=FBgn0000241.1 394 546 +
Chr2	stalkie_big_nohaplotig	exon	11833736	11833968	100	-	.	Parent=FBgn0000241.1.mrna1;Target=FBgn0000241.1 161 393 +
Chr2	stalkie_big_nohaplotig	exon	11834022	11834180	99	-	.	Parent=FBgn0000241.1.mrna1;Target=FBgn0000241.1 1 160 +
Chr2	stalkie_big_nohaplotig	CDS	11830138	11830322	.	-	2	Parent=FBgn0000241.1.mrna1;Target=FBgn0000241.1 1811 1995 +
Chr2	stalkie_big_nohaplotig	CDS	11830388	11830946	.	-	0	Parent=FBgn0000241.1.mrna1;Target=FBgn0000241.1 1252 1810 +
Chr2	stalkie_big_nohaplotig	CDS	11831013	11831118	.	-	1	Parent=FBgn0000241.1.mrna1;Target=FBgn0000241.1 1146 1251 +
Chr2	stalkie_big_nohaplotig	CDS	11831431	11831607	.	-	1	Parent=FBgn0000241.1.mrna1;Target=FBgn0000241.1 969 1145 +
Chr2	stalkie_big_nohaplotig	CDS	11832963	11833384	.	-	0	Parent=FBgn0000241.1.mrna1;Target=FBgn0000241.1 547 968 +
Chr2	stalkie_big_nohaplotig	CDS	11833508	11833660	.	-	0	Parent=FBgn0000241.1.mrna1;Target=FBgn0000241.1 394 546 +
Chr2	stalkie_big_nohaplotig	CDS	11833736	11833968	.	-	2	Parent=FBgn0000241.1.mrna1;Target=FBgn0000241.1 161 393 +
Chr2	stalkie_big_nohaplotig	CDS	11834022	11834154	.	-	0	Parent=FBgn0000241.1.mrna1;Target=FBgn0000241.1 28 160 +
Chr2	gffcl	locus	11849171	11850501	.	+	.	ID=RLOC_00014801;geneIDs=FBgn0050185.1.path1;transcripts=FBgn0050185.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11849171	11850501	.	+	.	ID=FBgn0050185.1.mrna1;geneID=FBgn0050185.1.path1;Name=FBgn0050185.1;Dir=sensecoverage=99.8;identity=99.5;matches=548;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014801
Chr2	stalkie_big_nohaplotig	exon	11849171	11849265	98	+	.	Parent=FBgn0050185.1.mrna1;Target=FBgn0050185.1 2 96 +
Chr2	stalkie_big_nohaplotig	exon	11849321	11849626	99	+	.	Parent=FBgn0050185.1.mrna1;Target=FBgn0050185.1 97 402 +
Chr2	stalkie_big_nohaplotig	exon	11850352	11850501	99	+	.	Parent=FBgn0050185.1.mrna1;Target=FBgn0050185.1 403 552 +
Chr2	stalkie_big_nohaplotig	CDS	11849173	11849265	.	+	0	Parent=FBgn0050185.1.mrna1;Target=FBgn0050185.1 4 96 +
Chr2	stalkie_big_nohaplotig	CDS	11849321	11849626	.	+	0	Parent=FBgn0050185.1.mrna1;Target=FBgn0050185.1 97 402 +
Chr2	stalkie_big_nohaplotig	CDS	11850352	11850501	.	+	0	Parent=FBgn0050185.1.mrna1;Target=FBgn0050185.1 403 552 +
Chr2	gffcl	locus	11850694	11907084	.	+	.	ID=RLOC_00014802;geneIDs=Dv_FBgn0207132.path1,comp155755_c0_seq1.path1;transcripts=comp155755_c0_seq1.mrna1,Dv_FBgn0207132.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11850694	11907084	.	+	.	ID=comp155755_c0_seq1.mrna1;geneID=comp155755_c0_seq1.path1;Name=comp155755_c0_seq1;Dir=antisensecoverage=59.4;identity=93.9;matches=1451;mismatches=24;indels=71;unknowns=0;locus=RLOC_00014802
Chr2	stalkie_big_nohaplotig	exon	11850694	11851041	99	+	.	Parent=comp155755_c0_seq1.mrna1;Target=comp155755_c0_seq1 2253 2600 -
Chr2	stalkie_big_nohaplotig	exon	11851107	11852078	96	+	.	Parent=comp155755_c0_seq1.mrna1;Target=comp155755_c0_seq1 1260 2252 -
Chr2	stalkie_big_nohaplotig	exon	11857291	11857296	100	+	.	Parent=comp155755_c0_seq1.mrna1;Target=comp155755_c0_seq1 1254 1259 -
Chr2	stalkie_big_nohaplotig	exon	11862043	11862049	100	+	.	Parent=comp155755_c0_seq1.mrna1;Target=comp155755_c0_seq1 1247 1253 -
Chr2	stalkie_big_nohaplotig	exon	11863613	11863614	100	+	.	Parent=comp155755_c0_seq1.mrna1;Target=comp155755_c0_seq1 1245 1246 -
Chr2	stalkie_big_nohaplotig	exon	11865523	11865529	100	+	.	Parent=comp155755_c0_seq1.mrna1;Target=comp155755_c0_seq1 1238 1244 -
Chr2	stalkie_big_nohaplotig	exon	11868022	11868029	100	+	.	Parent=comp155755_c0_seq1.mrna1;Target=comp155755_c0_seq1 1230 1237 -
Chr2	stalkie_big_nohaplotig	exon	11869378	11869385	100	+	.	Parent=comp155755_c0_seq1.mrna1;Target=comp155755_c0_seq1 1222 1229 -
Chr2	stalkie_big_nohaplotig	exon	11869624	11869628	100	+	.	Parent=comp155755_c0_seq1.mrna1;Target=comp155755_c0_seq1 1217 1221 -
Chr2	stalkie_big_nohaplotig	exon	11873791	11873794	100	+	.	Parent=comp155755_c0_seq1.mrna1;Target=comp155755_c0_seq1 1213 1216 -
Chr2	stalkie_big_nohaplotig	exon	11877153	11877160	100	+	.	Parent=comp155755_c0_seq1.mrna1;Target=comp155755_c0_seq1 1205 1212 -
Chr2	stalkie_big_nohaplotig	exon	11882779	11882780	100	+	.	Parent=comp155755_c0_seq1.mrna1;Target=comp155755_c0_seq1 1203 1204 -
Chr2	stalkie_big_nohaplotig	exon	11885038	11885042	100	+	.	Parent=comp155755_c0_seq1.mrna1;Target=comp155755_c0_seq1 1198 1202 -
Chr2	stalkie_big_nohaplotig	exon	11887029	11887058	59	+	.	Parent=comp155755_c0_seq1.mrna1;Target=comp155755_c0_seq1 1151 1197 -
Chr2	stalkie_big_nohaplotig	exon	11888245	11888256	38	+	.	Parent=comp155755_c0_seq1.mrna1;Target=comp155755_c0_seq1 1120 1150 -
Chr2	stalkie_big_nohaplotig	exon	11898184	11898188	100	+	.	Parent=comp155755_c0_seq1.mrna1;Target=comp155755_c0_seq1 1115 1119 -
Chr2	stalkie_big_nohaplotig	exon	11898722	11898732	90	+	.	Parent=comp155755_c0_seq1.mrna1;Target=comp155755_c0_seq1 1104 1114 -
Chr2	stalkie_big_nohaplotig	exon	11899315	11899343	61	+	.	Parent=comp155755_c0_seq1.mrna1;Target=comp155755_c0_seq1 1065 1103 -
Chr2	stalkie_big_nohaplotig	exon	11907077	11907084	100	+	.	Parent=comp155755_c0_seq1.mrna1;Target=comp155755_c0_seq1 1057 1064 -
Chr2	stalkie_big_nohaplotig	CDS	11850739	11851041	.	+	0	Parent=comp155755_c0_seq1.mrna1;Target=comp155755_c0_seq1 2253 2555 .
Chr2	stalkie_big_nohaplotig	CDS	11851107	11851409	.	+	0	Parent=comp155755_c0_seq1.mrna1;Target=comp155755_c0_seq1 1950 2252 .
Chr2	stalkie_big_nohaplotig	mRNA	11872262	11874281	.	+	.	ID=Dv_FBgn0207132.mrna1;geneID=Dv_FBgn0207132.path1;Name=Dv_FBgn0207132;Dir=indeterminatecoverage=99.3;identity=99.3;matches=2005;mismatches=15;indels=0;unknowns=0;Target=Dv_FBgn0207132 2034 15 .;CDS_Target=Dv_FBgn0207132 2034 16 .;locus=RLOC_00014802
Chr2	stalkie_big_nohaplotig	exon	11872262	11874281	99	+	.	Parent=Dv_FBgn0207132.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11872263	11874281	.	+	0	Parent=Dv_FBgn0207132.mrna1
Chr2	gffcl	locus	11874421	11874906	.	-	.	ID=RLOC_00014804;geneIDs=comp142542_c0_seq1.path1;transcripts=comp142542_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11874421	11874906	.	-	.	ID=comp142542_c0_seq1.mrna1;geneID=comp142542_c0_seq1.path1;Name=comp142542_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=474;mismatches=12;indels=0;unknowns=0;Target=comp142542_c0_seq1 486 1 .;CDS_Target=comp142542_c0_seq1 434 228 .;locus=RLOC_00014804
Chr2	stalkie_big_nohaplotig	exon	11874421	11874906	97	-	.	Parent=comp142542_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11874473	11874679	.	-	0	Parent=comp142542_c0_seq1.mrna1
Chr2	gffcl	locus	11874966	11875215	.	+	.	ID=RLOC_00014805;geneIDs=comp143005_c0_seq1.path1;transcripts=comp143005_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11874966	11875215	.	+	.	ID=comp143005_c0_seq1.mrna1;geneID=comp143005_c0_seq1.path1;Name=comp143005_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.8;matches=237;mismatches=12;indels=1;unknowns=0;Target=comp143005_c0_seq1 249 1 .;CDS_Target=comp143005_c0_seq1 52 2 .;locus=RLOC_00014805
Chr2	stalkie_big_nohaplotig	exon	11874966	11875215	94	+	.	Parent=comp143005_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11874967	11875018	.	+	0	Parent=comp143005_c0_seq1.mrna1
Chr2	gffcl	locus	11875508	11876202	.	+	.	ID=RLOC_00014806;geneIDs=comp154422_c2_seq1.path1;transcripts=comp154422_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11875508	11876202	.	+	.	ID=comp154422_c2_seq1.mrna1;geneID=comp154422_c2_seq1.path1;Name=comp154422_c2_seq1;Dir=indeterminatecoverage=96.5;identity=98.7;matches=687;mismatches=7;indels=2;unknowns=0;Target=comp154422_c2_seq1 695 1 .;CDS_Target=comp154422_c2_seq1 84 1 .;locus=RLOC_00014806
Chr2	stalkie_big_nohaplotig	exon	11875508	11876202	98	+	.	Parent=comp154422_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11875508	11875591	.	+	0	Parent=comp154422_c2_seq1.mrna1
Chr2	gffcl	locus	11876452	11882729	.	-	.	ID=RLOC_00014807;geneIDs=FBgn0034854.1.path1;transcripts=FBgn0034854.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11876452	11882729	.	-	.	ID=FBgn0034854.1.mrna1;geneID=FBgn0034854.1.path1;Name=FBgn0034854.1;Dir=sensecoverage=99.8;identity=99.4;matches=4665;mismatches=26;indels=0;unknowns=0;locus=RLOC_00014807
Chr2	stalkie_big_nohaplotig	exon	11876452	11876579	99	-	.	Parent=FBgn0034854.1.mrna1;Target=FBgn0034854.1 4564 4691 +
Chr2	stalkie_big_nohaplotig	exon	11877214	11877285	98	-	.	Parent=FBgn0034854.1.mrna1;Target=FBgn0034854.1 4492 4563 +
Chr2	stalkie_big_nohaplotig	exon	11877350	11881087	99	-	.	Parent=FBgn0034854.1.mrna1;Target=FBgn0034854.1 754 4491 +
Chr2	stalkie_big_nohaplotig	exon	11881156	11881353	98	-	.	Parent=FBgn0034854.1.mrna1;Target=FBgn0034854.1 556 753 +
Chr2	stalkie_big_nohaplotig	exon	11881853	11882056	99	-	.	Parent=FBgn0034854.1.mrna1;Target=FBgn0034854.1 352 555 +
Chr2	stalkie_big_nohaplotig	exon	11882117	11882298	99	-	.	Parent=FBgn0034854.1.mrna1;Target=FBgn0034854.1 170 351 +
Chr2	stalkie_big_nohaplotig	exon	11882351	11882438	97	-	.	Parent=FBgn0034854.1.mrna1;Target=FBgn0034854.1 82 169 +
Chr2	stalkie_big_nohaplotig	exon	11882649	11882729	100	-	.	Parent=FBgn0034854.1.mrna1;Target=FBgn0034854.1 1 81 +
Chr2	stalkie_big_nohaplotig	CDS	11876454	11876579	.	-	0	Parent=FBgn0034854.1.mrna1;Target=FBgn0034854.1 4564 4689 +
Chr2	stalkie_big_nohaplotig	CDS	11877214	11877285	.	-	0	Parent=FBgn0034854.1.mrna1;Target=FBgn0034854.1 4492 4563 +
Chr2	stalkie_big_nohaplotig	CDS	11877350	11881087	.	-	0	Parent=FBgn0034854.1.mrna1;Target=FBgn0034854.1 754 4491 +
Chr2	stalkie_big_nohaplotig	CDS	11881156	11881353	.	-	0	Parent=FBgn0034854.1.mrna1;Target=FBgn0034854.1 556 753 +
Chr2	stalkie_big_nohaplotig	CDS	11881853	11882056	.	-	0	Parent=FBgn0034854.1.mrna1;Target=FBgn0034854.1 352 555 +
Chr2	stalkie_big_nohaplotig	CDS	11882117	11882298	.	-	2	Parent=FBgn0034854.1.mrna1;Target=FBgn0034854.1 170 351 +
Chr2	stalkie_big_nohaplotig	CDS	11882351	11882438	.	-	0	Parent=FBgn0034854.1.mrna1;Target=FBgn0034854.1 82 169 +
Chr2	stalkie_big_nohaplotig	CDS	11882649	11882729	.	-	0	Parent=FBgn0034854.1.mrna1;Target=FBgn0034854.1 1 81 +
Chr2	gffcl	locus	11884405	11887223	.	-	.	ID=RLOC_00014808;geneIDs=FBgn0027619.1.path1,comp140957_c0_seq1.path1;transcripts=FBgn0027619.1.mrna1,comp140957_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11884405	11887223	.	-	.	ID=FBgn0027619.1.mrna1;geneID=FBgn0027619.1.path1;Name=FBgn0027619.1;Dir=sensecoverage=100.0;identity=99.6;matches=717;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014808
Chr2	stalkie_big_nohaplotig	exon	11884405	11884461	100	-	.	Parent=FBgn0027619.1.mrna1;Target=FBgn0027619.1 664 720 +
Chr2	stalkie_big_nohaplotig	exon	11884538	11884671	99	-	.	Parent=FBgn0027619.1.mrna1;Target=FBgn0027619.1 530 663 +
Chr2	stalkie_big_nohaplotig	exon	11884745	11885033	99	-	.	Parent=FBgn0027619.1.mrna1;Target=FBgn0027619.1 241 529 +
Chr2	stalkie_big_nohaplotig	exon	11885097	11885210	100	-	.	Parent=FBgn0027619.1.mrna1;Target=FBgn0027619.1 127 240 +
Chr2	stalkie_big_nohaplotig	exon	11886934	11887025	98	-	.	Parent=FBgn0027619.1.mrna1;Target=FBgn0027619.1 35 126 +
Chr2	stalkie_big_nohaplotig	exon	11887190	11887223	100	-	.	Parent=FBgn0027619.1.mrna1;Target=FBgn0027619.1 1 34 +
Chr2	stalkie_big_nohaplotig	CDS	11884405	11884461	.	-	0	Parent=FBgn0027619.1.mrna1;Target=FBgn0027619.1 664 720 +
Chr2	stalkie_big_nohaplotig	CDS	11884538	11884671	.	-	2	Parent=FBgn0027619.1.mrna1;Target=FBgn0027619.1 530 663 +
Chr2	stalkie_big_nohaplotig	CDS	11884745	11885033	.	-	0	Parent=FBgn0027619.1.mrna1;Target=FBgn0027619.1 241 529 +
Chr2	stalkie_big_nohaplotig	CDS	11885097	11885210	.	-	0	Parent=FBgn0027619.1.mrna1;Target=FBgn0027619.1 127 240 +
Chr2	stalkie_big_nohaplotig	CDS	11886934	11887025	.	-	2	Parent=FBgn0027619.1.mrna1;Target=FBgn0027619.1 35 126 +
Chr2	stalkie_big_nohaplotig	CDS	11887190	11887223	.	-	0	Parent=FBgn0027619.1.mrna1;Target=FBgn0027619.1 1 34 +
Chr2	stalkie_big_nohaplotig	mRNA	11886690	11886956	.	-	.	ID=comp140957_c0_seq1.mrna1;geneID=comp140957_c0_seq1.path1;Name=comp140957_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=264;mismatches=3;indels=0;unknowns=0;Target=comp140957_c0_seq1 267 1 .;CDS_Target=comp140957_c0_seq1 86 3 .;locus=RLOC_00014808
Chr2	stalkie_big_nohaplotig	exon	11886690	11886956	98	-	.	Parent=comp140957_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11886871	11886954	.	-	0	Parent=comp140957_c0_seq1.mrna1
Chr2	gffcl	locus	11888847	11892314	.	+	.	ID=RLOC_00014809;geneIDs=FBgn0034315.1.path1;transcripts=FBgn0034315.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11888847	11892314	.	+	.	ID=FBgn0034315.1.mrna1;geneID=FBgn0034315.1.path1;Name=FBgn0034315.1;Dir=sensecoverage=100.0;identity=99.1;matches=1418;mismatches=13;indels=0;unknowns=0;locus=RLOC_00014809
Chr2	stalkie_big_nohaplotig	exon	11888847	11888996	99	+	.	Parent=FBgn0034315.1.mrna1;Target=FBgn0034315.1 1 150 +
Chr2	stalkie_big_nohaplotig	exon	11889379	11889546	99	+	.	Parent=FBgn0034315.1.mrna1;Target=FBgn0034315.1 151 318 +
Chr2	stalkie_big_nohaplotig	exon	11889604	11890087	99	+	.	Parent=FBgn0034315.1.mrna1;Target=FBgn0034315.1 319 802 +
Chr2	stalkie_big_nohaplotig	exon	11890160	11890281	100	+	.	Parent=FBgn0034315.1.mrna1;Target=FBgn0034315.1 803 924 +
Chr2	stalkie_big_nohaplotig	exon	11890340	11890480	98	+	.	Parent=FBgn0034315.1.mrna1;Target=FBgn0034315.1 925 1065 +
Chr2	stalkie_big_nohaplotig	exon	11891880	11892029	98	+	.	Parent=FBgn0034315.1.mrna1;Target=FBgn0034315.1 1066 1215 +
Chr2	stalkie_big_nohaplotig	exon	11892099	11892314	98	+	.	Parent=FBgn0034315.1.mrna1;Target=FBgn0034315.1 1216 1431 +
Chr2	stalkie_big_nohaplotig	CDS	11888847	11888996	.	+	0	Parent=FBgn0034315.1.mrna1;Target=FBgn0034315.1 1 150 +
Chr2	stalkie_big_nohaplotig	CDS	11889379	11889546	.	+	0	Parent=FBgn0034315.1.mrna1;Target=FBgn0034315.1 151 318 +
Chr2	stalkie_big_nohaplotig	CDS	11889604	11890087	.	+	0	Parent=FBgn0034315.1.mrna1;Target=FBgn0034315.1 319 802 +
Chr2	stalkie_big_nohaplotig	CDS	11890160	11890281	.	+	2	Parent=FBgn0034315.1.mrna1;Target=FBgn0034315.1 803 924 +
Chr2	stalkie_big_nohaplotig	CDS	11890340	11890480	.	+	0	Parent=FBgn0034315.1.mrna1;Target=FBgn0034315.1 925 1065 +
Chr2	stalkie_big_nohaplotig	CDS	11891880	11892029	.	+	0	Parent=FBgn0034315.1.mrna1;Target=FBgn0034315.1 1066 1215 +
Chr2	stalkie_big_nohaplotig	CDS	11892099	11892314	.	+	0	Parent=FBgn0034315.1.mrna1;Target=FBgn0034315.1 1216 1431 +
Chr2	gffcl	locus	11894441	11896210	.	-	.	ID=RLOC_00014810;geneIDs=FBgn0034314.1.path1;transcripts=FBgn0034314.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11894441	11896210	.	-	.	ID=FBgn0034314.1.mrna1;geneID=FBgn0034314.1.path1;Name=FBgn0034314.1;Dir=sensecoverage=100.0;identity=99.6;matches=1273;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014810
Chr2	stalkie_big_nohaplotig	exon	11894441	11894629	100	-	.	Parent=FBgn0034314.1.mrna1;Target=FBgn0034314.1 1090 1278 +
Chr2	stalkie_big_nohaplotig	exon	11894696	11894884	99	-	.	Parent=FBgn0034314.1.mrna1;Target=FBgn0034314.1 901 1089 +
Chr2	stalkie_big_nohaplotig	exon	11894938	11895066	99	-	.	Parent=FBgn0034314.1.mrna1;Target=FBgn0034314.1 772 900 +
Chr2	stalkie_big_nohaplotig	exon	11895133	11895190	98	-	.	Parent=FBgn0034314.1.mrna1;Target=FBgn0034314.1 714 771 +
Chr2	stalkie_big_nohaplotig	exon	11895265	11895357	100	-	.	Parent=FBgn0034314.1.mrna1;Target=FBgn0034314.1 621 713 +
Chr2	stalkie_big_nohaplotig	exon	11895411	11895601	100	-	.	Parent=FBgn0034314.1.mrna1;Target=FBgn0034314.1 430 620 +
Chr2	stalkie_big_nohaplotig	exon	11895661	11895730	100	-	.	Parent=FBgn0034314.1.mrna1;Target=FBgn0034314.1 360 429 +
Chr2	stalkie_big_nohaplotig	exon	11895792	11896007	100	-	.	Parent=FBgn0034314.1.mrna1;Target=FBgn0034314.1 144 359 +
Chr2	stalkie_big_nohaplotig	exon	11896068	11896210	98	-	.	Parent=FBgn0034314.1.mrna1;Target=FBgn0034314.1 1 143 +
Chr2	stalkie_big_nohaplotig	CDS	11894441	11894629	.	-	0	Parent=FBgn0034314.1.mrna1;Target=FBgn0034314.1 1090 1278 +
Chr2	stalkie_big_nohaplotig	CDS	11894696	11894884	.	-	0	Parent=FBgn0034314.1.mrna1;Target=FBgn0034314.1 901 1089 +
Chr2	stalkie_big_nohaplotig	CDS	11894938	11895066	.	-	0	Parent=FBgn0034314.1.mrna1;Target=FBgn0034314.1 772 900 +
Chr2	stalkie_big_nohaplotig	CDS	11895133	11895190	.	-	1	Parent=FBgn0034314.1.mrna1;Target=FBgn0034314.1 714 771 +
Chr2	stalkie_big_nohaplotig	CDS	11895265	11895357	.	-	1	Parent=FBgn0034314.1.mrna1;Target=FBgn0034314.1 621 713 +
Chr2	stalkie_big_nohaplotig	CDS	11895411	11895601	.	-	0	Parent=FBgn0034314.1.mrna1;Target=FBgn0034314.1 430 620 +
Chr2	stalkie_big_nohaplotig	CDS	11895661	11895730	.	-	1	Parent=FBgn0034314.1.mrna1;Target=FBgn0034314.1 360 429 +
Chr2	stalkie_big_nohaplotig	CDS	11895792	11896007	.	-	1	Parent=FBgn0034314.1.mrna1;Target=FBgn0034314.1 144 359 +
Chr2	stalkie_big_nohaplotig	CDS	11896068	11896210	.	-	0	Parent=FBgn0034314.1.mrna1;Target=FBgn0034314.1 1 143 +
Chr2	gffcl	locus	11899126	11905055	.	-	.	ID=RLOC_00014811;geneIDs=comp152800_c0_seq1.path1;transcripts=comp152800_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11899126	11905055	.	-	.	ID=comp152800_c0_seq1.mrna1;geneID=comp152800_c0_seq1.path1;Name=comp152800_c0_seq1;Dir=indeterminatecoverage=97.7;identity=91.0;matches=508;mismatches=8;indels=42;unknowns=0;Target=comp152800_c0_seq1 227 174 .;locus=RLOC_00014811
Chr2	stalkie_big_nohaplotig	exon	11899126	11899630	90	-	.	Parent=comp152800_c0_seq1.mrna1;Target=comp152800_c0_seq1 568 28 .
Chr2	stalkie_big_nohaplotig	exon	11902858	11902859	100	-	.	Parent=comp152800_c0_seq1.mrna1;Target=comp152800_c0_seq1 27 26 .
Chr2	stalkie_big_nohaplotig	exon	11905044	11905055	91	-	.	Parent=comp152800_c0_seq1.mrna1;Target=comp152800_c0_seq1 25 14 .
Chr2	stalkie_big_nohaplotig	CDS	11899465	11899517	.	-	0	Parent=comp152800_c0_seq1.mrna1
Chr2	gffcl	locus	11899719	11900953	.	+	.	ID=RLOC_00014812;geneIDs=comp153191_c0_seq1.path1;transcripts=comp153191_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11899719	11900953	.	+	.	ID=comp153191_c0_seq1.mrna1;geneID=comp153191_c0_seq1.path1;Name=comp153191_c0_seq1;Dir=indeterminatecoverage=98.9;identity=94.1;matches=1044;mismatches=37;indels=29;unknowns=0;Target=comp153191_c0_seq1 887 798 .;locus=RLOC_00014812
Chr2	stalkie_big_nohaplotig	exon	11899719	11899841	91	+	.	Parent=comp153191_c0_seq1.mrna1;Target=comp153191_c0_seq1 135 14 .
Chr2	stalkie_big_nohaplotig	exon	11899928	11899939	100	+	.	Parent=comp153191_c0_seq1.mrna1;Target=comp153191_c0_seq1 147 136 .
Chr2	stalkie_big_nohaplotig	exon	11899967	11900307	90	+	.	Parent=comp153191_c0_seq1.mrna1;Target=comp153191_c0_seq1 488 164 .
Chr2	stalkie_big_nohaplotig	exon	11900332	11900953	96	+	.	Parent=comp153191_c0_seq1.mrna1;Target=comp153191_c0_seq1 1171 538 .
Chr2	stalkie_big_nohaplotig	CDS	11900580	11900669	.	+	0	Parent=comp153191_c0_seq1.mrna1
Chr2	gffcl	locus	11902172	11902533	.	+	.	ID=RLOC_00014813;geneIDs=comp145934_c0_seq1.path1;transcripts=comp145934_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11902172	11902533	.	+	.	ID=comp145934_c0_seq1.mrna1;geneID=comp145934_c0_seq1.path1;Name=comp145934_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=360;mismatches=2;indels=0;unknowns=0;Target=comp145934_c0_seq1 362 1 .;CDS_Target=comp145934_c0_seq1 244 203 .;locus=RLOC_00014813
Chr2	stalkie_big_nohaplotig	exon	11902172	11902533	99	+	.	Parent=comp145934_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11902374	11902415	.	+	0	Parent=comp145934_c0_seq1.mrna1
Chr2	gffcl	locus	11902542	11902790	.	+	.	ID=RLOC_00014814;geneIDs=comp118548_c0_seq1.path1;transcripts=comp118548_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11902542	11902790	.	+	.	ID=comp118548_c0_seq1.mrna1;geneID=comp118548_c0_seq1.path1;Name=comp118548_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=249;mismatches=0;indels=0;unknowns=0;Target=comp118548_c0_seq1 249 1 .;CDS_Target=comp118548_c0_seq1 152 3 .;locus=RLOC_00014814
Chr2	stalkie_big_nohaplotig	exon	11902542	11902790	100	+	.	Parent=comp118548_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	11902544	11902693	.	+	0	Parent=comp118548_c0_seq1.mrna1
Chr2	gffcl	locus	11982154	11983477	.	+	.	ID=RLOC_00014815;geneIDs=FBgn0260768.1.path1;transcripts=FBgn0260768.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	11982154	11983477	.	+	.	ID=FBgn0260768.1.mrna1;geneID=FBgn0260768.1.path1;Name=FBgn0260768.1;Dir=sensecoverage=95.1;identity=100.0;matches=254;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014815
Chr2	stalkie_big_nohaplotig	exon	11982154	11982307	100	+	.	Parent=FBgn0260768.1.mrna1;Target=FBgn0260768.1 14 167 +
Chr2	stalkie_big_nohaplotig	exon	11983378	11983477	100	+	.	Parent=FBgn0260768.1.mrna1;Target=FBgn0260768.1 168 267 +
Chr2	stalkie_big_nohaplotig	CDS	11982156	11982307	.	+	0	Parent=FBgn0260768.1.mrna1;Target=FBgn0260768.1 16 167 +
Chr2	stalkie_big_nohaplotig	CDS	11983378	11983477	.	+	1	Parent=FBgn0260768.1.mrna1;Target=FBgn0260768.1 168 267 +
Chr2	gffcl	locus	12000437	12001253	.	+	.	ID=RLOC_00014816;geneIDs=comp118385_c0_seq1.path1;transcripts=comp118385_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12000437	12001253	.	+	.	ID=comp118385_c0_seq1.mrna1;geneID=comp118385_c0_seq1.path1;Name=comp118385_c0_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=690;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014816
Chr2	stalkie_big_nohaplotig	exon	12000437	12000527	97	+	.	Parent=comp118385_c0_seq1.mrna1;Target=comp118385_c0_seq1 606 696 -
Chr2	stalkie_big_nohaplotig	exon	12000593	12000748	98	+	.	Parent=comp118385_c0_seq1.mrna1;Target=comp118385_c0_seq1 450 605 -
Chr2	stalkie_big_nohaplotig	exon	12000805	12001253	99	+	.	Parent=comp118385_c0_seq1.mrna1;Target=comp118385_c0_seq1 1 449 -
Chr2	stalkie_big_nohaplotig	CDS	12000438	12000527	.	+	0	Parent=comp118385_c0_seq1.mrna1;Target=comp118385_c0_seq1 606 695 .
Chr2	stalkie_big_nohaplotig	CDS	12000593	12000748	.	+	0	Parent=comp118385_c0_seq1.mrna1;Target=comp118385_c0_seq1 450 605 .
Chr2	stalkie_big_nohaplotig	CDS	12000805	12001143	.	+	0	Parent=comp118385_c0_seq1.mrna1;Target=comp118385_c0_seq1 111 449 .
Chr2	gffcl	locus	12011606	12012133	.	-	.	ID=RLOC_00014817;geneIDs=comp155037_c1_seq1.path1;transcripts=comp155037_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12011606	12012133	.	-	.	ID=comp155037_c1_seq1.mrna1;geneID=comp155037_c1_seq1.path1;Name=comp155037_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=528;mismatches=0;indels=0;unknowns=0;Target=comp155037_c1_seq1 528 1 .;CDS_Target=comp155037_c1_seq1 323 3 .;locus=RLOC_00014817
Chr2	stalkie_big_nohaplotig	exon	12011606	12012133	100	-	.	Parent=comp155037_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12011811	12012131	.	-	0	Parent=comp155037_c1_seq1.mrna1
Chr2	gffcl	locus	12049433	12050140	.	-	.	ID=RLOC_00014818;geneIDs=comp127079_c0_seq1.path1;transcripts=comp127079_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12049433	12050140	.	-	.	ID=comp127079_c0_seq1.mrna1;geneID=comp127079_c0_seq1.path1;Name=comp127079_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.3;matches=682;mismatches=13;indels=13;unknowns=0;Target=comp127079_c0_seq1 695 1 .;CDS_Target=comp127079_c0_seq1 545 396 .;locus=RLOC_00014818
Chr2	stalkie_big_nohaplotig	exon	12049433	12050140	96	-	.	Parent=comp127079_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12049583	12049732	.	-	0	Parent=comp127079_c0_seq1.mrna1
Chr2	gffcl	locus	12056673	12073478	.	+	.	ID=RLOC_00014819;geneIDs=FBgn0263934.1.path1;transcripts=FBgn0263934.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12056673	12073478	.	+	.	ID=FBgn0263934.1.mrna1;geneID=FBgn0263934.1.path1;Name=FBgn0263934.1;Dir=sensecoverage=64.0;identity=99.6;matches=2410;mismatches=9;indels=0;unknowns=0;locus=RLOC_00014819
Chr2	stalkie_big_nohaplotig	exon	12056673	12057219	100	+	.	Parent=FBgn0263934.1.mrna1;Target=FBgn0263934.1 1362 1908 +
Chr2	stalkie_big_nohaplotig	exon	12059591	12059704	99	+	.	Parent=FBgn0263934.1.mrna1;Target=FBgn0263934.1 1909 2022 +
Chr2	stalkie_big_nohaplotig	exon	12060036	12060164	97	+	.	Parent=FBgn0263934.1.mrna1;Target=FBgn0263934.1 2023 2151 +
Chr2	stalkie_big_nohaplotig	exon	12070417	12070620	100	+	.	Parent=FBgn0263934.1.mrna1;Target=FBgn0263934.1 2152 2355 +
Chr2	stalkie_big_nohaplotig	exon	12072054	12073478	99	+	.	Parent=FBgn0263934.1.mrna1;Target=FBgn0263934.1 2356 3780 +
Chr2	stalkie_big_nohaplotig	CDS	12056674	12057219	.	+	0	Parent=FBgn0263934.1.mrna1;Target=FBgn0263934.1 1363 1908 +
Chr2	stalkie_big_nohaplotig	CDS	12059591	12059704	.	+	0	Parent=FBgn0263934.1.mrna1;Target=FBgn0263934.1 1909 2022 +
Chr2	stalkie_big_nohaplotig	CDS	12060036	12060164	.	+	0	Parent=FBgn0263934.1.mrna1;Target=FBgn0263934.1 2023 2151 +
Chr2	stalkie_big_nohaplotig	CDS	12070417	12070620	.	+	0	Parent=FBgn0263934.1.mrna1;Target=FBgn0263934.1 2152 2355 +
Chr2	stalkie_big_nohaplotig	CDS	12072054	12073478	.	+	0	Parent=FBgn0263934.1.mrna1;Target=FBgn0263934.1 2356 3780 +
Chr2	gffcl	locus	12094784	12098607	.	+	.	ID=RLOC_00014820;geneIDs=FBgn0036208.1.path1;transcripts=FBgn0036208.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12094784	12098607	.	+	.	ID=FBgn0036208.1.mrna1;geneID=FBgn0036208.1.path1;Name=FBgn0036208.1;Dir=sensecoverage=100.0;identity=100.0;matches=1329;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014820
Chr2	stalkie_big_nohaplotig	exon	12094784	12094871	100	+	.	Parent=FBgn0036208.1.mrna1;Target=FBgn0036208.1 1 88 +
Chr2	stalkie_big_nohaplotig	exon	12096922	12097145	100	+	.	Parent=FBgn0036208.1.mrna1;Target=FBgn0036208.1 89 312 +
Chr2	stalkie_big_nohaplotig	exon	12097206	12097515	100	+	.	Parent=FBgn0036208.1.mrna1;Target=FBgn0036208.1 313 622 +
Chr2	stalkie_big_nohaplotig	exon	12097762	12098313	100	+	.	Parent=FBgn0036208.1.mrna1;Target=FBgn0036208.1 623 1174 +
Chr2	stalkie_big_nohaplotig	exon	12098453	12098607	100	+	.	Parent=FBgn0036208.1.mrna1;Target=FBgn0036208.1 1175 1329 +
Chr2	stalkie_big_nohaplotig	CDS	12094784	12094871	.	+	0	Parent=FBgn0036208.1.mrna1;Target=FBgn0036208.1 1 88 +
Chr2	stalkie_big_nohaplotig	CDS	12096922	12097145	.	+	2	Parent=FBgn0036208.1.mrna1;Target=FBgn0036208.1 89 312 +
Chr2	stalkie_big_nohaplotig	CDS	12097206	12097515	.	+	0	Parent=FBgn0036208.1.mrna1;Target=FBgn0036208.1 313 622 +
Chr2	stalkie_big_nohaplotig	CDS	12097762	12098313	.	+	2	Parent=FBgn0036208.1.mrna1;Target=FBgn0036208.1 623 1174 +
Chr2	stalkie_big_nohaplotig	CDS	12098453	12098607	.	+	2	Parent=FBgn0036208.1.mrna1;Target=FBgn0036208.1 1175 1329 +
Chr2	gffcl	locus	12103996	12105174	.	+	.	ID=RLOC_00014821;geneIDs=comp153388_c0_seq1.path1;transcripts=comp153388_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12103996	12105174	.	+	.	ID=comp153388_c0_seq1.mrna1;geneID=comp153388_c0_seq1.path1;Name=comp153388_c0_seq1;Dir=antisensecoverage=98.9;identity=99.9;matches=976;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014821
Chr2	stalkie_big_nohaplotig	exon	12103996	12104480	100	+	.	Parent=comp153388_c0_seq1.mrna1;Target=comp153388_c0_seq1 503 987 -
Chr2	stalkie_big_nohaplotig	exon	12104555	12104689	100	+	.	Parent=comp153388_c0_seq1.mrna1;Target=comp153388_c0_seq1 368 502 -
Chr2	stalkie_big_nohaplotig	exon	12104764	12104843	100	+	.	Parent=comp153388_c0_seq1.mrna1;Target=comp153388_c0_seq1 288 367 -
Chr2	stalkie_big_nohaplotig	exon	12104898	12105174	99	+	.	Parent=comp153388_c0_seq1.mrna1;Target=comp153388_c0_seq1 11 287 -
Chr2	stalkie_big_nohaplotig	CDS	12104463	12104480	.	+	0	Parent=comp153388_c0_seq1.mrna1;Target=comp153388_c0_seq1 503 520 .
Chr2	stalkie_big_nohaplotig	CDS	12104555	12104689	.	+	0	Parent=comp153388_c0_seq1.mrna1;Target=comp153388_c0_seq1 368 502 .
Chr2	stalkie_big_nohaplotig	CDS	12104764	12104843	.	+	0	Parent=comp153388_c0_seq1.mrna1;Target=comp153388_c0_seq1 288 367 .
Chr2	stalkie_big_nohaplotig	CDS	12104898	12105009	.	+	1	Parent=comp153388_c0_seq1.mrna1;Target=comp153388_c0_seq1 176 287 .
Chr2	gffcl	locus	12113451	12116128	.	+	.	ID=RLOC_00014822;geneIDs=FBgn0024294.1.path1;transcripts=FBgn0024294.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12113451	12116128	.	+	.	ID=FBgn0024294.1.mrna1;geneID=FBgn0024294.1.path1;Name=FBgn0024294.1;Dir=sensecoverage=100.0;identity=99.9;matches=1199;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014822
Chr2	stalkie_big_nohaplotig	exon	12113451	12113499	100	+	.	Parent=FBgn0024294.1.mrna1;Target=FBgn0024294.1 1 49 +
Chr2	stalkie_big_nohaplotig	exon	12113702	12114585	100	+	.	Parent=FBgn0024294.1.mrna1;Target=FBgn0024294.1 50 933 +
Chr2	stalkie_big_nohaplotig	exon	12115756	12115900	100	+	.	Parent=FBgn0024294.1.mrna1;Target=FBgn0024294.1 934 1078 +
Chr2	stalkie_big_nohaplotig	exon	12116007	12116128	99	+	.	Parent=FBgn0024294.1.mrna1;Target=FBgn0024294.1 1079 1200 +
Chr2	stalkie_big_nohaplotig	CDS	12113451	12113499	.	+	0	Parent=FBgn0024294.1.mrna1;Target=FBgn0024294.1 1 49 +
Chr2	stalkie_big_nohaplotig	CDS	12113702	12114585	.	+	2	Parent=FBgn0024294.1.mrna1;Target=FBgn0024294.1 50 933 +
Chr2	stalkie_big_nohaplotig	CDS	12115756	12115900	.	+	0	Parent=FBgn0024294.1.mrna1;Target=FBgn0024294.1 934 1078 +
Chr2	stalkie_big_nohaplotig	CDS	12116007	12116128	.	+	2	Parent=FBgn0024294.1.mrna1;Target=FBgn0024294.1 1079 1200 +
Chr2	gffcl	locus	12134428	12135818	.	-	.	ID=RLOC_00014823;geneIDs=FBgn0024293.1.path1;transcripts=FBgn0024293.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12134428	12135818	.	-	.	ID=FBgn0024293.1.mrna1;geneID=FBgn0024293.1.path1;Name=FBgn0024293.1;Dir=sensecoverage=100.0;identity=100.0;matches=1194;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014823
Chr2	stalkie_big_nohaplotig	exon	12134428	12134546	100	-	.	Parent=FBgn0024293.1.mrna1;Target=FBgn0024293.1 1076 1194 +
Chr2	stalkie_big_nohaplotig	exon	12134611	12134755	100	-	.	Parent=FBgn0024293.1.mrna1;Target=FBgn0024293.1 931 1075 +
Chr2	stalkie_big_nohaplotig	exon	12134808	12135718	100	-	.	Parent=FBgn0024293.1.mrna1;Target=FBgn0024293.1 20 930 +
Chr2	stalkie_big_nohaplotig	exon	12135800	12135818	100	-	.	Parent=FBgn0024293.1.mrna1;Target=FBgn0024293.1 1 19 +
Chr2	stalkie_big_nohaplotig	CDS	12134428	12134546	.	-	2	Parent=FBgn0024293.1.mrna1;Target=FBgn0024293.1 1076 1194 +
Chr2	stalkie_big_nohaplotig	CDS	12134611	12134755	.	-	0	Parent=FBgn0024293.1.mrna1;Target=FBgn0024293.1 931 1075 +
Chr2	stalkie_big_nohaplotig	CDS	12134808	12135718	.	-	2	Parent=FBgn0024293.1.mrna1;Target=FBgn0024293.1 20 930 +
Chr2	stalkie_big_nohaplotig	CDS	12135800	12135818	.	-	0	Parent=FBgn0024293.1.mrna1;Target=FBgn0024293.1 1 19 +
Chr2	gffcl	locus	12140309	12142845	.	-	.	ID=RLOC_00014824;geneIDs=FBgn0002930.1.path1;transcripts=FBgn0002930.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12140309	12142845	.	-	.	ID=FBgn0002930.1.mrna1;geneID=FBgn0002930.1.path1;Name=FBgn0002930.1;Dir=sensecoverage=100.0;identity=99.1;matches=1795;mismatches=11;indels=6;unknowns=0;locus=RLOC_00014824
Chr2	stalkie_big_nohaplotig	exon	12140309	12140430	100	-	.	Parent=FBgn0002930.1.mrna1;Target=FBgn0002930.1 1685 1806 +
Chr2	stalkie_big_nohaplotig	exon	12140500	12140641	98	-	.	Parent=FBgn0002930.1.mrna1;Target=FBgn0002930.1 1543 1684 +
Chr2	stalkie_big_nohaplotig	exon	12140792	12142323	99	-	.	Parent=FBgn0002930.1.mrna1;Target=FBgn0002930.1 17 1542 +
Chr2	stalkie_big_nohaplotig	exon	12142830	12142845	100	-	.	Parent=FBgn0002930.1.mrna1;Target=FBgn0002930.1 1 16 +
Chr2	stalkie_big_nohaplotig	CDS	12140309	12140430	.	-	2	Parent=FBgn0002930.1.mrna1;Target=FBgn0002930.1 1685 1806 +
Chr2	stalkie_big_nohaplotig	CDS	12140500	12140641	.	-	0	Parent=FBgn0002930.1.mrna1;Target=FBgn0002930.1 1543 1684 +
Chr2	stalkie_big_nohaplotig	CDS	12140792	12142323	.	-	2	Parent=FBgn0002930.1.mrna1;Target=FBgn0002930.1 17 1542 +
Chr2	stalkie_big_nohaplotig	CDS	12142830	12142845	.	-	0	Parent=FBgn0002930.1.mrna1;Target=FBgn0002930.1 1 16 +
Chr2	gffcl	locus	12144416	12149065	.	-	.	ID=RLOC_00014825;geneIDs=FBgn0024294.2.path1;transcripts=FBgn0024294.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12144416	12149065	.	-	.	ID=FBgn0024294.2.mrna1;geneID=FBgn0024294.2.path1;Name=FBgn0024294.2;Dir=sensecoverage=100.0;identity=99.8;matches=1671;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014825
Chr2	stalkie_big_nohaplotig	exon	12144416	12144537	100	-	.	Parent=FBgn0024294.2.mrna1;Target=FBgn0024294.2 1553 1674 +
Chr2	stalkie_big_nohaplotig	exon	12145163	12145301	100	-	.	Parent=FBgn0024294.2.mrna1;Target=FBgn0024294.2 1414 1552 +
Chr2	stalkie_big_nohaplotig	exon	12145364	12146691	99	-	.	Parent=FBgn0024294.2.mrna1;Target=FBgn0024294.2 86 1413 +
Chr2	stalkie_big_nohaplotig	exon	12148981	12149065	100	-	.	Parent=FBgn0024294.2.mrna1;Target=FBgn0024294.2 1 85 +
Chr2	stalkie_big_nohaplotig	CDS	12144416	12144537	.	-	2	Parent=FBgn0024294.2.mrna1;Target=FBgn0024294.2 1553 1674 +
Chr2	stalkie_big_nohaplotig	CDS	12145163	12145301	.	-	0	Parent=FBgn0024294.2.mrna1;Target=FBgn0024294.2 1414 1552 +
Chr2	stalkie_big_nohaplotig	CDS	12145364	12146691	.	-	2	Parent=FBgn0024294.2.mrna1;Target=FBgn0024294.2 86 1413 +
Chr2	stalkie_big_nohaplotig	CDS	12148981	12149065	.	-	0	Parent=FBgn0024294.2.mrna1;Target=FBgn0024294.2 1 85 +
Chr2	gffcl	locus	12172159	12173008	.	+	.	ID=RLOC_00014826;geneIDs=comp98875_c1_seq1.path1;transcripts=comp98875_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12172159	12173008	.	+	.	ID=comp98875_c1_seq1.mrna1;geneID=comp98875_c1_seq1.path1;Name=comp98875_c1_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=849;mismatches=1;indels=0;unknowns=0;Target=comp98875_c1_seq1 851 2 .;CDS_Target=comp98875_c1_seq1 149 3 .;locus=RLOC_00014826
Chr2	stalkie_big_nohaplotig	exon	12172159	12173008	99	+	.	Parent=comp98875_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12172160	12172306	.	+	0	Parent=comp98875_c1_seq1.mrna1
Chr2	gffcl	locus	12189660	12190592	.	-	.	ID=RLOC_00014827;geneIDs=comp154599_c0_seq1.path1;transcripts=comp154599_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12189660	12190592	.	-	.	ID=comp154599_c0_seq1.mrna1;geneID=comp154599_c0_seq1.path1;Name=comp154599_c0_seq1;Dir=indeterminatecoverage=85.2;identity=98.6;matches=920;mismatches=13;indels=0;unknowns=0;Target=comp154599_c0_seq1 933 1 .;CDS_Target=comp154599_c0_seq1 855 1 .;locus=RLOC_00014827
Chr2	stalkie_big_nohaplotig	exon	12189660	12190592	98	-	.	Parent=comp154599_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12189738	12190592	.	-	0	Parent=comp154599_c0_seq1.mrna1
Chr2	gffcl	locus	12197018	12198943	.	-	.	ID=RLOC_00014828;geneIDs=FBgn0030594.1.path1;transcripts=FBgn0030594.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12197018	12198943	.	-	.	ID=FBgn0030594.1.mrna1;geneID=FBgn0030594.1.path1;Name=FBgn0030594.1;Dir=sensecoverage=100.0;identity=99.6;matches=1862;mismatches=7;indels=0;unknowns=0;locus=RLOC_00014828
Chr2	stalkie_big_nohaplotig	exon	12197018	12198589	99	-	.	Parent=FBgn0030594.1.mrna1;Target=FBgn0030594.1 298 1869 +
Chr2	stalkie_big_nohaplotig	exon	12198647	12198943	100	-	.	Parent=FBgn0030594.1.mrna1;Target=FBgn0030594.1 1 297 +
Chr2	stalkie_big_nohaplotig	CDS	12197018	12198589	.	-	0	Parent=FBgn0030594.1.mrna1;Target=FBgn0030594.1 298 1869 +
Chr2	stalkie_big_nohaplotig	CDS	12198647	12198943	.	-	0	Parent=FBgn0030594.1.mrna1;Target=FBgn0030594.1 1 297 +
Chr2	gffcl	locus	12199537	12200493	.	-	.	ID=RLOC_00014829;geneIDs=comp154389_c0_seq1.path1;transcripts=comp154389_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12199537	12200493	.	-	.	ID=comp154389_c0_seq1.mrna1;geneID=comp154389_c0_seq1.path1;Name=comp154389_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=955;mismatches=2;indels=0;unknowns=0;Target=comp154389_c0_seq1 957 1 .;CDS_Target=comp154389_c0_seq1 430 242 .;locus=RLOC_00014829
Chr2	stalkie_big_nohaplotig	exon	12199537	12200493	99	-	.	Parent=comp154389_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12200064	12200252	.	-	0	Parent=comp154389_c0_seq1.mrna1
Chr2	gffcl	locus	12237639	12240404	.	+	.	ID=RLOC_00014831;geneIDs=comp57973_c0_seq1.path1;transcripts=comp57973_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12237639	12240404	.	+	.	ID=comp57973_c0_seq1.mrna1;geneID=comp57973_c0_seq1.path1;Name=comp57973_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=1015;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014831
Chr2	stalkie_big_nohaplotig	exon	12237639	12237845	100	+	.	Parent=comp57973_c0_seq1.mrna1;Target=comp57973_c0_seq1 810 1016 -
Chr2	stalkie_big_nohaplotig	exon	12239220	12239393	100	+	.	Parent=comp57973_c0_seq1.mrna1;Target=comp57973_c0_seq1 636 809 -
Chr2	stalkie_big_nohaplotig	exon	12239635	12239793	100	+	.	Parent=comp57973_c0_seq1.mrna1;Target=comp57973_c0_seq1 477 635 -
Chr2	stalkie_big_nohaplotig	exon	12239867	12240064	100	+	.	Parent=comp57973_c0_seq1.mrna1;Target=comp57973_c0_seq1 279 476 -
Chr2	stalkie_big_nohaplotig	exon	12240127	12240404	99	+	.	Parent=comp57973_c0_seq1.mrna1;Target=comp57973_c0_seq1 1 278 -
Chr2	stalkie_big_nohaplotig	CDS	12237789	12237845	.	+	0	Parent=comp57973_c0_seq1.mrna1;Target=comp57973_c0_seq1 810 866 .
Chr2	stalkie_big_nohaplotig	CDS	12239220	12239393	.	+	0	Parent=comp57973_c0_seq1.mrna1;Target=comp57973_c0_seq1 636 809 .
Chr2	stalkie_big_nohaplotig	CDS	12239635	12239793	.	+	0	Parent=comp57973_c0_seq1.mrna1;Target=comp57973_c0_seq1 477 635 .
Chr2	stalkie_big_nohaplotig	CDS	12239867	12240064	.	+	0	Parent=comp57973_c0_seq1.mrna1;Target=comp57973_c0_seq1 279 476 .
Chr2	stalkie_big_nohaplotig	CDS	12240127	12240225	.	+	0	Parent=comp57973_c0_seq1.mrna1;Target=comp57973_c0_seq1 180 278 .
Chr2	gffcl	locus	12240665	12243204	.	-	.	ID=RLOC_00014832;geneIDs=FBgn0033140.1.path1;transcripts=FBgn0033140.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12240665	12243204	.	-	.	ID=FBgn0033140.1.mrna1;geneID=FBgn0033140.1.path1;Name=FBgn0033140.1;Dir=sensecoverage=100.0;identity=98.7;matches=542;mismatches=7;indels=0;unknowns=0;locus=RLOC_00014832
Chr2	stalkie_big_nohaplotig	exon	12240665	12240827	100	-	.	Parent=FBgn0033140.1.mrna1;Target=FBgn0033140.1 387 549 +
Chr2	stalkie_big_nohaplotig	exon	12240887	12241213	98	-	.	Parent=FBgn0033140.1.mrna1;Target=FBgn0033140.1 60 386 +
Chr2	stalkie_big_nohaplotig	exon	12243146	12243204	96	-	.	Parent=FBgn0033140.1.mrna1;Target=FBgn0033140.1 1 59 +
Chr2	stalkie_big_nohaplotig	CDS	12240665	12240827	.	-	1	Parent=FBgn0033140.1.mrna1;Target=FBgn0033140.1 387 549 +
Chr2	stalkie_big_nohaplotig	CDS	12240887	12241213	.	-	1	Parent=FBgn0033140.1.mrna1;Target=FBgn0033140.1 60 386 +
Chr2	stalkie_big_nohaplotig	CDS	12243146	12243174	.	-	0	Parent=FBgn0033140.1.mrna1;Target=FBgn0033140.1 31 59 +
Chr2	gffcl	locus	12247233	12249272	.	-	.	ID=RLOC_00014833;geneIDs=comp143271_c0_seq1.path1;transcripts=comp143271_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12247233	12249272	.	-	.	ID=comp143271_c0_seq1.mrna1;geneID=comp143271_c0_seq1.path1;Name=comp143271_c0_seq1;Dir=sensecoverage=96.5;identity=98.8;matches=994;mismatches=10;indels=2;unknowns=0;locus=RLOC_00014833
Chr2	stalkie_big_nohaplotig	exon	12247233	12247507	98	-	.	Parent=comp143271_c0_seq1.mrna1;Target=comp143271_c0_seq1 752 1027 +
Chr2	stalkie_big_nohaplotig	exon	12247578	12247775	99	-	.	Parent=comp143271_c0_seq1.mrna1;Target=comp143271_c0_seq1 554 751 +
Chr2	stalkie_big_nohaplotig	exon	12247844	12248002	100	-	.	Parent=comp143271_c0_seq1.mrna1;Target=comp143271_c0_seq1 395 553 +
Chr2	stalkie_big_nohaplotig	exon	12248143	12248316	100	-	.	Parent=comp143271_c0_seq1.mrna1;Target=comp143271_c0_seq1 221 394 +
Chr2	stalkie_big_nohaplotig	exon	12249075	12249272	96	-	.	Parent=comp143271_c0_seq1.mrna1;Target=comp143271_c0_seq1 22 220 +
Chr2	stalkie_big_nohaplotig	CDS	12247427	12247507	.	-	0	Parent=comp143271_c0_seq1.mrna1;Target=comp143271_c0_seq1 752 832 +
Chr2	stalkie_big_nohaplotig	CDS	12247578	12247775	.	-	0	Parent=comp143271_c0_seq1.mrna1;Target=comp143271_c0_seq1 554 751 +
Chr2	stalkie_big_nohaplotig	CDS	12247844	12248002	.	-	0	Parent=comp143271_c0_seq1.mrna1;Target=comp143271_c0_seq1 395 553 +
Chr2	stalkie_big_nohaplotig	CDS	12248143	12248316	.	-	0	Parent=comp143271_c0_seq1.mrna1;Target=comp143271_c0_seq1 221 394 +
Chr2	stalkie_big_nohaplotig	CDS	12249075	12249131	.	-	0	Parent=comp143271_c0_seq1.mrna1;Target=comp143271_c0_seq1 164 220 +
Chr2	gffcl	locus	12251038	12253800	.	+	.	ID=RLOC_00014834;geneIDs=FBgn0033138.1.path1;transcripts=FBgn0033138.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12251038	12253800	.	+	.	ID=FBgn0033138.1.mrna1;geneID=FBgn0033138.1.path1;Name=FBgn0033138.1;Dir=sensecoverage=100.0;identity=100.0;matches=663;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014834
Chr2	stalkie_big_nohaplotig	exon	12251038	12251103	100	+	.	Parent=FBgn0033138.1.mrna1;Target=FBgn0033138.1 1 66 +
Chr2	stalkie_big_nohaplotig	exon	12252684	12252857	100	+	.	Parent=FBgn0033138.1.mrna1;Target=FBgn0033138.1 67 240 +
Chr2	stalkie_big_nohaplotig	exon	12252929	12253081	100	+	.	Parent=FBgn0033138.1.mrna1;Target=FBgn0033138.1 241 393 +
Chr2	stalkie_big_nohaplotig	exon	12253470	12253667	100	+	.	Parent=FBgn0033138.1.mrna1;Target=FBgn0033138.1 394 591 +
Chr2	stalkie_big_nohaplotig	exon	12253729	12253800	100	+	.	Parent=FBgn0033138.1.mrna1;Target=FBgn0033138.1 592 663 +
Chr2	stalkie_big_nohaplotig	CDS	12251038	12251103	.	+	0	Parent=FBgn0033138.1.mrna1;Target=FBgn0033138.1 1 66 +
Chr2	stalkie_big_nohaplotig	CDS	12252684	12252857	.	+	0	Parent=FBgn0033138.1.mrna1;Target=FBgn0033138.1 67 240 +
Chr2	stalkie_big_nohaplotig	CDS	12252929	12253081	.	+	0	Parent=FBgn0033138.1.mrna1;Target=FBgn0033138.1 241 393 +
Chr2	stalkie_big_nohaplotig	CDS	12253470	12253667	.	+	0	Parent=FBgn0033138.1.mrna1;Target=FBgn0033138.1 394 591 +
Chr2	stalkie_big_nohaplotig	CDS	12253729	12253800	.	+	0	Parent=FBgn0033138.1.mrna1;Target=FBgn0033138.1 592 663 +
Chr2	gffcl	locus	12272029	12276409	.	+	.	ID=RLOC_00014835;geneIDs=FBgn0026602.1.path1;transcripts=FBgn0026602.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12272029	12276409	.	+	.	ID=FBgn0026602.1.mrna1;geneID=FBgn0026602.1.path1;Name=FBgn0026602.1;Dir=sensecoverage=100.0;identity=99.6;matches=1153;mismatches=4;indels=1;unknowns=0;locus=RLOC_00014835
Chr2	stalkie_big_nohaplotig	exon	12272029	12272167	97	+	.	Parent=FBgn0026602.1.mrna1;Target=FBgn0026602.1 1 140 +
Chr2	stalkie_big_nohaplotig	exon	12272250	12272405	100	+	.	Parent=FBgn0026602.1.mrna1;Target=FBgn0026602.1 141 296 +
Chr2	stalkie_big_nohaplotig	exon	12272496	12272651	100	+	.	Parent=FBgn0026602.1.mrna1;Target=FBgn0026602.1 297 452 +
Chr2	stalkie_big_nohaplotig	exon	12275704	12276409	99	+	.	Parent=FBgn0026602.1.mrna1;Target=FBgn0026602.1 453 1158 +
Chr2	stalkie_big_nohaplotig	CDS	12272094	12272167	.	+	0	Parent=FBgn0026602.1.mrna1;Target=FBgn0026602.1 67 140 +
Chr2	stalkie_big_nohaplotig	CDS	12272250	12272405	.	+	1	Parent=FBgn0026602.1.mrna1;Target=FBgn0026602.1 141 296 +
Chr2	stalkie_big_nohaplotig	CDS	12272496	12272651	.	+	1	Parent=FBgn0026602.1.mrna1;Target=FBgn0026602.1 297 452 +
Chr2	stalkie_big_nohaplotig	CDS	12275704	12276409	.	+	1	Parent=FBgn0026602.1.mrna1;Target=FBgn0026602.1 453 1158 +
Chr2	gffcl	locus	12282417	12283783	.	-	.	ID=RLOC_00014836;geneIDs=comp103507_c0_seq1.path1;transcripts=comp103507_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12282417	12283783	.	-	.	ID=comp103507_c0_seq1.mrna1;geneID=comp103507_c0_seq1.path1;Name=comp103507_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.6;matches=1353;mismatches=14;indels=33;unknowns=0;Target=comp103507_c0_seq1 1400 1 .;CDS_Target=comp103507_c0_seq1 788 552 .;locus=RLOC_00014836
Chr2	stalkie_big_nohaplotig	exon	12282417	12283783	96	-	.	Parent=comp103507_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12282997	12283233	.	-	0	Parent=comp103507_c0_seq1.mrna1
Chr2	gffcl	locus	12406401	12407791	.	-	.	ID=RLOC_00014838;geneIDs=FBgn0024293.1.path2;transcripts=FBgn0024293.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	12406401	12407791	.	-	.	ID=FBgn0024293.1.mrna2;geneID=FBgn0024293.1.path2;Name=FBgn0024293.1;Dir=sensecoverage=100.0;identity=100.0;matches=1194;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014838
Chr2	stalkie_big_nohaplotig	exon	12406401	12406519	100	-	.	Parent=FBgn0024293.1.mrna2;Target=FBgn0024293.1 1076 1194 +
Chr2	stalkie_big_nohaplotig	exon	12406584	12406728	100	-	.	Parent=FBgn0024293.1.mrna2;Target=FBgn0024293.1 931 1075 +
Chr2	stalkie_big_nohaplotig	exon	12406781	12407691	100	-	.	Parent=FBgn0024293.1.mrna2;Target=FBgn0024293.1 20 930 +
Chr2	stalkie_big_nohaplotig	exon	12407773	12407791	100	-	.	Parent=FBgn0024293.1.mrna2;Target=FBgn0024293.1 1 19 +
Chr2	stalkie_big_nohaplotig	CDS	12406401	12406519	.	-	2	Parent=FBgn0024293.1.mrna2;Target=FBgn0024293.1 1076 1194 +
Chr2	stalkie_big_nohaplotig	CDS	12406584	12406728	.	-	0	Parent=FBgn0024293.1.mrna2;Target=FBgn0024293.1 931 1075 +
Chr2	stalkie_big_nohaplotig	CDS	12406781	12407691	.	-	2	Parent=FBgn0024293.1.mrna2;Target=FBgn0024293.1 20 930 +
Chr2	stalkie_big_nohaplotig	CDS	12407773	12407791	.	-	0	Parent=FBgn0024293.1.mrna2;Target=FBgn0024293.1 1 19 +
Chr2	gffcl	locus	12463619	12466315	.	+	.	ID=RLOC_00014839;geneIDs=FBgn0013995.1.path1;transcripts=FBgn0013995.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12463619	12466315	.	+	.	ID=FBgn0013995.1.mrna1;geneID=FBgn0013995.1.path1;Name=FBgn0013995.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=2684;mismatches=13;indels=0;unknowns=0;Target=FBgn0013995.1 2697 1 .;locus=RLOC_00014839
Chr2	stalkie_big_nohaplotig	exon	12463619	12466315	99	+	.	Parent=FBgn0013995.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12463619	12466315	.	+	0	Parent=FBgn0013995.1.mrna1
Chr2	gffcl	locus	12596061	12596529	.	-	.	ID=RLOC_00014840;geneIDs=comp2246608_c0_seq1.path1;transcripts=comp2246608_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12596061	12596529	.	-	.	ID=comp2246608_c0_seq1.mrna1;geneID=comp2246608_c0_seq1.path1;Name=comp2246608_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=464;mismatches=5;indels=1;unknowns=0;Target=comp2246608_c0_seq1 470 1 .;CDS_Target=comp2246608_c0_seq1 369 238 .;locus=RLOC_00014840
Chr2	stalkie_big_nohaplotig	exon	12596061	12596529	98	-	.	Parent=comp2246608_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12596161	12596292	.	-	0	Parent=comp2246608_c0_seq1.mrna1
Chr2	gffcl	locus	12612994	12618633	.	.	.	ID=RLOC_00014841;geneIDs=FBgn0027558.1.path1,comp117100_c0_seq1.path1;transcripts=FBgn0027558.1.mrna1,comp117100_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12612994	12618633	.	+	.	ID=FBgn0027558.1.mrna1;geneID=FBgn0027558.1.path1;Name=FBgn0027558.1;Dir=sensecoverage=99.9;identity=99.3;matches=1623;mismatches=11;indels=0;unknowns=0;locus=RLOC_00014841
Chr2	stalkie_big_nohaplotig	exon	12612994	12613142	100	+	.	Parent=FBgn0027558.1.mrna1;Target=FBgn0027558.1 1 149 +
Chr2	stalkie_big_nohaplotig	exon	12613523	12613623	99	+	.	Parent=FBgn0027558.1.mrna1;Target=FBgn0027558.1 150 250 +
Chr2	stalkie_big_nohaplotig	exon	12613751	12613931	100	+	.	Parent=FBgn0027558.1.mrna1;Target=FBgn0027558.1 251 431 +
Chr2	stalkie_big_nohaplotig	exon	12617312	12617478	99	+	.	Parent=FBgn0027558.1.mrna1;Target=FBgn0027558.1 432 598 +
Chr2	stalkie_big_nohaplotig	exon	12617536	12617990	99	+	.	Parent=FBgn0027558.1.mrna1;Target=FBgn0027558.1 599 1053 +
Chr2	stalkie_big_nohaplotig	exon	12618053	12618633	99	+	.	Parent=FBgn0027558.1.mrna1;Target=FBgn0027558.1 1054 1634 +
Chr2	stalkie_big_nohaplotig	CDS	12612994	12613142	.	+	0	Parent=FBgn0027558.1.mrna1;Target=FBgn0027558.1 1 149 +
Chr2	stalkie_big_nohaplotig	CDS	12613523	12613623	.	+	1	Parent=FBgn0027558.1.mrna1;Target=FBgn0027558.1 150 250 +
Chr2	stalkie_big_nohaplotig	CDS	12613751	12613931	.	+	2	Parent=FBgn0027558.1.mrna1;Target=FBgn0027558.1 251 431 +
Chr2	stalkie_big_nohaplotig	CDS	12617312	12617478	.	+	1	Parent=FBgn0027558.1.mrna1;Target=FBgn0027558.1 432 598 +
Chr2	stalkie_big_nohaplotig	CDS	12617536	12617990	.	+	2	Parent=FBgn0027558.1.mrna1;Target=FBgn0027558.1 599 1053 +
Chr2	stalkie_big_nohaplotig	CDS	12618053	12618631	.	+	0	Parent=FBgn0027558.1.mrna1;Target=FBgn0027558.1 1054 1632 +
Chr2	stalkie_big_nohaplotig	mRNA	12613908	12614163	.	-	.	ID=comp117100_c0_seq1.mrna1;geneID=comp117100_c0_seq1.path1;Name=comp117100_c0_seq1;Dir=indeterminatecoverage=87.4;identity=100.0;matches=256;mismatches=0;indels=0;unknowns=0;Target=comp117100_c0_seq1 293 38 .;CDS_Target=comp117100_c0_seq1 101 39 .;locus=RLOC_00014841
Chr2	stalkie_big_nohaplotig	exon	12613908	12614163	100	-	.	Parent=comp117100_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12614100	12614162	.	-	0	Parent=comp117100_c0_seq1.mrna1
Chr2	gffcl	locus	12619851	12622092	.	.	.	ID=RLOC_00014842;geneIDs=FBgn0033137.1.path1,comp138203_c0_seq1.path1;transcripts=FBgn0033137.1.mrna1,comp138203_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12619851	12622092	.	+	.	ID=FBgn0033137.1.mrna1;geneID=FBgn0033137.1.path1;Name=FBgn0033137.1;Dir=sensecoverage=100.0;identity=100.0;matches=786;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014842
Chr2	stalkie_big_nohaplotig	exon	12619851	12619961	100	+	.	Parent=FBgn0033137.1.mrna1;Target=FBgn0033137.1 1 111 +
Chr2	stalkie_big_nohaplotig	exon	12621190	12621363	100	+	.	Parent=FBgn0033137.1.mrna1;Target=FBgn0033137.1 112 285 +
Chr2	stalkie_big_nohaplotig	exon	12621431	12621586	100	+	.	Parent=FBgn0033137.1.mrna1;Target=FBgn0033137.1 286 441 +
Chr2	stalkie_big_nohaplotig	exon	12621642	12621839	100	+	.	Parent=FBgn0033137.1.mrna1;Target=FBgn0033137.1 442 639 +
Chr2	stalkie_big_nohaplotig	exon	12621946	12622092	100	+	.	Parent=FBgn0033137.1.mrna1;Target=FBgn0033137.1 640 786 +
Chr2	stalkie_big_nohaplotig	CDS	12619851	12619961	.	+	0	Parent=FBgn0033137.1.mrna1;Target=FBgn0033137.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	12621190	12621363	.	+	0	Parent=FBgn0033137.1.mrna1;Target=FBgn0033137.1 112 285 +
Chr2	stalkie_big_nohaplotig	CDS	12621431	12621586	.	+	0	Parent=FBgn0033137.1.mrna1;Target=FBgn0033137.1 286 441 +
Chr2	stalkie_big_nohaplotig	CDS	12621642	12621839	.	+	0	Parent=FBgn0033137.1.mrna1;Target=FBgn0033137.1 442 639 +
Chr2	stalkie_big_nohaplotig	CDS	12621946	12622092	.	+	0	Parent=FBgn0033137.1.mrna1;Target=FBgn0033137.1 640 786 +
Chr2	stalkie_big_nohaplotig	mRNA	12620712	12621212	.	-	.	ID=comp138203_c0_seq1.mrna1;geneID=comp138203_c0_seq1.path1;Name=comp138203_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.0;matches=499;mismatches=2;indels=19;unknowns=0;Target=comp138203_c0_seq1 520 1 .;CDS_Target=comp138203_c0_seq1 480 358 .;locus=RLOC_00014842
Chr2	stalkie_big_nohaplotig	exon	12620712	12621212	95	-	.	Parent=comp138203_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12620752	12620874	.	-	0	Parent=comp138203_c0_seq1.mrna1
Chr2	gffcl	locus	12622125	12625175	.	-	.	ID=RLOC_00014843;geneIDs=comp120276_c0_seq1.path1;transcripts=comp120276_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12622125	12625175	.	-	.	ID=comp120276_c0_seq1.mrna1;geneID=comp120276_c0_seq1.path1;Name=comp120276_c0_seq1;Dir=sensecoverage=99.5;identity=97.5;matches=1495;mismatches=23;indels=15;unknowns=0;locus=RLOC_00014843
Chr2	stalkie_big_nohaplotig	exon	12622125	12622458	100	-	.	Parent=comp120276_c0_seq1.mrna1;Target=comp120276_c0_seq1 1191 1524 +
Chr2	stalkie_big_nohaplotig	exon	12623680	12623877	100	-	.	Parent=comp120276_c0_seq1.mrna1;Target=comp120276_c0_seq1 993 1190 +
Chr2	stalkie_big_nohaplotig	exon	12623944	12624096	100	-	.	Parent=comp120276_c0_seq1.mrna1;Target=comp120276_c0_seq1 840 992 +
Chr2	stalkie_big_nohaplotig	exon	12624173	12624340	100	-	.	Parent=comp120276_c0_seq1.mrna1;Target=comp120276_c0_seq1 672 839 +
Chr2	stalkie_big_nohaplotig	exon	12624425	12624510	100	-	.	Parent=comp120276_c0_seq1.mrna1;Target=comp120276_c0_seq1 586 671 +
Chr2	stalkie_big_nohaplotig	exon	12624583	12625175	93	-	.	Parent=comp120276_c0_seq1.mrna1;Target=comp120276_c0_seq1 6 585 +
Chr2	stalkie_big_nohaplotig	CDS	12622387	12622458	.	-	0	Parent=comp120276_c0_seq1.mrna1;Target=comp120276_c0_seq1 1191 1262 +
Chr2	stalkie_big_nohaplotig	CDS	12623680	12623877	.	-	0	Parent=comp120276_c0_seq1.mrna1;Target=comp120276_c0_seq1 993 1190 +
Chr2	stalkie_big_nohaplotig	CDS	12623944	12624096	.	-	0	Parent=comp120276_c0_seq1.mrna1;Target=comp120276_c0_seq1 840 992 +
Chr2	stalkie_big_nohaplotig	CDS	12624173	12624340	.	-	0	Parent=comp120276_c0_seq1.mrna1;Target=comp120276_c0_seq1 672 839 +
Chr2	stalkie_big_nohaplotig	CDS	12624425	12624484	.	-	0	Parent=comp120276_c0_seq1.mrna1;Target=comp120276_c0_seq1 612 671 +
Chr2	gffcl	locus	12626576	12628780	.	-	.	ID=RLOC_00014844;geneIDs=FBgn0020270.1.path1;transcripts=FBgn0020270.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12626576	12628780	.	-	.	ID=FBgn0020270.1.mrna1;geneID=FBgn0020270.1.path1;Name=FBgn0020270.1;Dir=sensecoverage=99.6;identity=99.6;matches=1916;mismatches=7;indels=1;unknowns=0;locus=RLOC_00014844
Chr2	stalkie_big_nohaplotig	exon	12626576	12627056	98	-	.	Parent=FBgn0020270.1.mrna1;Target=FBgn0020270.1 1443 1924 +
Chr2	stalkie_big_nohaplotig	exon	12627116	12627276	100	-	.	Parent=FBgn0020270.1.mrna1;Target=FBgn0020270.1 1282 1442 +
Chr2	stalkie_big_nohaplotig	exon	12627332	12627439	100	-	.	Parent=FBgn0020270.1.mrna1;Target=FBgn0020270.1 1174 1281 +
Chr2	stalkie_big_nohaplotig	exon	12627491	12628433	99	-	.	Parent=FBgn0020270.1.mrna1;Target=FBgn0020270.1 231 1173 +
Chr2	stalkie_big_nohaplotig	exon	12628491	12628614	99	-	.	Parent=FBgn0020270.1.mrna1;Target=FBgn0020270.1 107 230 +
Chr2	stalkie_big_nohaplotig	exon	12628675	12628780	99	-	.	Parent=FBgn0020270.1.mrna1;Target=FBgn0020270.1 1 106 +
Chr2	stalkie_big_nohaplotig	CDS	12626577	12627056	.	-	1	Parent=FBgn0020270.1.mrna1;Target=FBgn0020270.1 1443 1923 +
Chr2	stalkie_big_nohaplotig	CDS	12627116	12627276	.	-	0	Parent=FBgn0020270.1.mrna1;Target=FBgn0020270.1 1282 1442 +
Chr2	stalkie_big_nohaplotig	CDS	12627332	12627439	.	-	0	Parent=FBgn0020270.1.mrna1;Target=FBgn0020270.1 1174 1281 +
Chr2	stalkie_big_nohaplotig	CDS	12627491	12628433	.	-	1	Parent=FBgn0020270.1.mrna1;Target=FBgn0020270.1 231 1173 +
Chr2	stalkie_big_nohaplotig	CDS	12628491	12628614	.	-	2	Parent=FBgn0020270.1.mrna1;Target=FBgn0020270.1 107 230 +
Chr2	stalkie_big_nohaplotig	CDS	12628675	12628780	.	-	0	Parent=FBgn0020270.1.mrna1;Target=FBgn0020270.1 1 106 +
Chr2	gffcl	locus	12630353	12632789	.	-	.	ID=RLOC_00014845;geneIDs=FBgn0033139.1.path1;transcripts=FBgn0033139.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12630353	12632789	.	-	.	ID=FBgn0033139.1.mrna1;geneID=FBgn0033139.1.path1;Name=FBgn0033139.1;Dir=sensecoverage=100.0;identity=99.8;matches=665;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014845
Chr2	stalkie_big_nohaplotig	exon	12630353	12630427	100	-	.	Parent=FBgn0033139.1.mrna1;Target=FBgn0033139.1 592 666 +
Chr2	stalkie_big_nohaplotig	exon	12631964	12632161	100	-	.	Parent=FBgn0033139.1.mrna1;Target=FBgn0033139.1 394 591 +
Chr2	stalkie_big_nohaplotig	exon	12632231	12632386	100	-	.	Parent=FBgn0033139.1.mrna1;Target=FBgn0033139.1 238 393 +
Chr2	stalkie_big_nohaplotig	exon	12632463	12632630	100	-	.	Parent=FBgn0033139.1.mrna1;Target=FBgn0033139.1 70 237 +
Chr2	stalkie_big_nohaplotig	exon	12632721	12632789	98	-	.	Parent=FBgn0033139.1.mrna1;Target=FBgn0033139.1 1 69 +
Chr2	stalkie_big_nohaplotig	CDS	12630353	12630427	.	-	0	Parent=FBgn0033139.1.mrna1;Target=FBgn0033139.1 592 666 +
Chr2	stalkie_big_nohaplotig	CDS	12631964	12632161	.	-	0	Parent=FBgn0033139.1.mrna1;Target=FBgn0033139.1 394 591 +
Chr2	stalkie_big_nohaplotig	CDS	12632231	12632386	.	-	0	Parent=FBgn0033139.1.mrna1;Target=FBgn0033139.1 238 393 +
Chr2	stalkie_big_nohaplotig	CDS	12632463	12632630	.	-	0	Parent=FBgn0033139.1.mrna1;Target=FBgn0033139.1 70 237 +
Chr2	stalkie_big_nohaplotig	CDS	12632721	12632789	.	-	0	Parent=FBgn0033139.1.mrna1;Target=FBgn0033139.1 1 69 +
Chr2	gffcl	locus	12634897	12640153	.	-	.	ID=RLOC_00014846;geneIDs=FBgn0033136.1.path1;transcripts=FBgn0033136.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12634897	12640153	.	-	.	ID=FBgn0033136.1.mrna1;geneID=FBgn0033136.1.path1;Name=FBgn0033136.1;Dir=sensecoverage=100.0;identity=99.2;matches=658;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014846
Chr2	stalkie_big_nohaplotig	exon	12634897	12634965	98	-	.	Parent=FBgn0033136.1.mrna1;Target=FBgn0033136.1 595 663 +
Chr2	stalkie_big_nohaplotig	exon	12635030	12635227	98	-	.	Parent=FBgn0033136.1.mrna1;Target=FBgn0033136.1 397 594 +
Chr2	stalkie_big_nohaplotig	exon	12636070	12636225	100	-	.	Parent=FBgn0033136.1.mrna1;Target=FBgn0033136.1 241 396 +
Chr2	stalkie_big_nohaplotig	exon	12636299	12636472	99	-	.	Parent=FBgn0033136.1.mrna1;Target=FBgn0033136.1 67 240 +
Chr2	stalkie_big_nohaplotig	exon	12640088	12640153	98	-	.	Parent=FBgn0033136.1.mrna1;Target=FBgn0033136.1 1 66 +
Chr2	stalkie_big_nohaplotig	CDS	12634897	12634965	.	-	0	Parent=FBgn0033136.1.mrna1;Target=FBgn0033136.1 595 663 +
Chr2	stalkie_big_nohaplotig	CDS	12635030	12635227	.	-	0	Parent=FBgn0033136.1.mrna1;Target=FBgn0033136.1 397 594 +
Chr2	stalkie_big_nohaplotig	CDS	12636070	12636225	.	-	0	Parent=FBgn0033136.1.mrna1;Target=FBgn0033136.1 241 396 +
Chr2	stalkie_big_nohaplotig	CDS	12636299	12636472	.	-	0	Parent=FBgn0033136.1.mrna1;Target=FBgn0033136.1 67 240 +
Chr2	stalkie_big_nohaplotig	CDS	12640088	12640153	.	-	0	Parent=FBgn0033136.1.mrna1;Target=FBgn0033136.1 1 66 +
Chr2	gffcl	locus	12643753	12646669	.	-	.	ID=RLOC_00014847;geneIDs=FBgn0016032.1.path1;transcripts=FBgn0016032.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12643753	12646669	.	-	.	ID=FBgn0016032.1.mrna1;geneID=FBgn0016032.1.path1;Name=FBgn0016032.1;Dir=sensecoverage=100.0;identity=99.0;matches=624;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014847
Chr2	stalkie_big_nohaplotig	exon	12643753	12643821	98	-	.	Parent=FBgn0016032.1.mrna1;Target=FBgn0016032.1 562 630 +
Chr2	stalkie_big_nohaplotig	exon	12643885	12644217	99	-	.	Parent=FBgn0016032.1.mrna1;Target=FBgn0016032.1 229 561 +
Chr2	stalkie_big_nohaplotig	exon	12644343	12644501	98	-	.	Parent=FBgn0016032.1.mrna1;Target=FBgn0016032.1 70 228 +
Chr2	stalkie_big_nohaplotig	exon	12646601	12646669	100	-	.	Parent=FBgn0016032.1.mrna1;Target=FBgn0016032.1 1 69 +
Chr2	stalkie_big_nohaplotig	CDS	12643753	12643821	.	-	0	Parent=FBgn0016032.1.mrna1;Target=FBgn0016032.1 562 630 +
Chr2	stalkie_big_nohaplotig	CDS	12643885	12644217	.	-	0	Parent=FBgn0016032.1.mrna1;Target=FBgn0016032.1 229 561 +
Chr2	stalkie_big_nohaplotig	CDS	12644343	12644501	.	-	0	Parent=FBgn0016032.1.mrna1;Target=FBgn0016032.1 70 228 +
Chr2	stalkie_big_nohaplotig	CDS	12646601	12646669	.	-	0	Parent=FBgn0016032.1.mrna1;Target=FBgn0016032.1 1 69 +
Chr2	gffcl	locus	12651917	12661275	.	-	.	ID=RLOC_00014848;geneIDs=FBgn0033134.1.path1;transcripts=FBgn0033134.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12651917	12661275	.	-	.	ID=FBgn0033134.1.mrna1;geneID=FBgn0033134.1.path1;Name=FBgn0033134.1;Dir=sensecoverage=100.0;identity=99.8;matches=647;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014848
Chr2	stalkie_big_nohaplotig	exon	12651917	12651985	100	-	.	Parent=FBgn0033134.1.mrna1;Target=FBgn0033134.1 580 648 +
Chr2	stalkie_big_nohaplotig	exon	12652052	12652249	100	-	.	Parent=FBgn0033134.1.mrna1;Target=FBgn0033134.1 382 579 +
Chr2	stalkie_big_nohaplotig	exon	12652397	12652552	100	-	.	Parent=FBgn0033134.1.mrna1;Target=FBgn0033134.1 226 381 +
Chr2	stalkie_big_nohaplotig	exon	12652634	12652792	100	-	.	Parent=FBgn0033134.1.mrna1;Target=FBgn0033134.1 67 225 +
Chr2	stalkie_big_nohaplotig	exon	12661210	12661275	98	-	.	Parent=FBgn0033134.1.mrna1;Target=FBgn0033134.1 1 66 +
Chr2	stalkie_big_nohaplotig	CDS	12651917	12651985	.	-	0	Parent=FBgn0033134.1.mrna1;Target=FBgn0033134.1 580 648 +
Chr2	stalkie_big_nohaplotig	CDS	12652052	12652249	.	-	0	Parent=FBgn0033134.1.mrna1;Target=FBgn0033134.1 382 579 +
Chr2	stalkie_big_nohaplotig	CDS	12652397	12652552	.	-	0	Parent=FBgn0033134.1.mrna1;Target=FBgn0033134.1 226 381 +
Chr2	stalkie_big_nohaplotig	CDS	12652634	12652792	.	-	0	Parent=FBgn0033134.1.mrna1;Target=FBgn0033134.1 67 225 +
Chr2	stalkie_big_nohaplotig	CDS	12661210	12661275	.	-	0	Parent=FBgn0033134.1.mrna1;Target=FBgn0033134.1 1 66 +
Chr2	gffcl	locus	12663289	12665598	.	-	.	ID=RLOC_00014849;geneIDs=comp153398_c0_seq1.path1;transcripts=comp153398_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12663289	12665598	.	-	.	ID=comp153398_c0_seq1.mrna1;geneID=comp153398_c0_seq1.path1;Name=comp153398_c0_seq1;Dir=sensecoverage=99.7;identity=99.9;matches=1458;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014849
Chr2	stalkie_big_nohaplotig	exon	12663289	12664172	99	-	.	Parent=comp153398_c0_seq1.mrna1;Target=comp153398_c0_seq1 576 1459 +
Chr2	stalkie_big_nohaplotig	exon	12664240	12664428	100	-	.	Parent=comp153398_c0_seq1.mrna1;Target=comp153398_c0_seq1 387 575 +
Chr2	stalkie_big_nohaplotig	exon	12665062	12665220	100	-	.	Parent=comp153398_c0_seq1.mrna1;Target=comp153398_c0_seq1 228 386 +
Chr2	stalkie_big_nohaplotig	exon	12665283	12665441	100	-	.	Parent=comp153398_c0_seq1.mrna1;Target=comp153398_c0_seq1 69 227 +
Chr2	stalkie_big_nohaplotig	exon	12665531	12665598	100	-	.	Parent=comp153398_c0_seq1.mrna1;Target=comp153398_c0_seq1 1 68 +
Chr2	stalkie_big_nohaplotig	CDS	12664089	12664172	.	-	0	Parent=comp153398_c0_seq1.mrna1;Target=comp153398_c0_seq1 576 659 +
Chr2	stalkie_big_nohaplotig	CDS	12664240	12664428	.	-	0	Parent=comp153398_c0_seq1.mrna1;Target=comp153398_c0_seq1 387 575 +
Chr2	stalkie_big_nohaplotig	CDS	12665062	12665220	.	-	0	Parent=comp153398_c0_seq1.mrna1;Target=comp153398_c0_seq1 228 386 +
Chr2	stalkie_big_nohaplotig	CDS	12665283	12665441	.	-	0	Parent=comp153398_c0_seq1.mrna1;Target=comp153398_c0_seq1 69 227 +
Chr2	stalkie_big_nohaplotig	CDS	12665531	12665596	.	-	0	Parent=comp153398_c0_seq1.mrna1;Target=comp153398_c0_seq1 3 68 +
Chr2	gffcl	locus	12670065	12672965	.	-	.	ID=RLOC_00014850;geneIDs=comp143618_c0_seq1.path1;transcripts=comp143618_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12670065	12672965	.	-	.	ID=comp143618_c0_seq1.mrna1;geneID=comp143618_c0_seq1.path1;Name=comp143618_c0_seq1;Dir=antisensecoverage=99.9;identity=100.0;matches=1251;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014850
Chr2	stalkie_big_nohaplotig	exon	12670065	12670553	100	-	.	Parent=comp143618_c0_seq1.mrna1;Target=comp143618_c0_seq1 1 489 -
Chr2	stalkie_big_nohaplotig	exon	12670633	12670830	100	-	.	Parent=comp143618_c0_seq1.mrna1;Target=comp143618_c0_seq1 490 687 -
Chr2	stalkie_big_nohaplotig	exon	12672252	12672410	100	-	.	Parent=comp143618_c0_seq1.mrna1;Target=comp143618_c0_seq1 688 846 -
Chr2	stalkie_big_nohaplotig	exon	12672463	12672621	100	-	.	Parent=comp143618_c0_seq1.mrna1;Target=comp143618_c0_seq1 847 1005 -
Chr2	stalkie_big_nohaplotig	exon	12672720	12672965	100	-	.	Parent=comp143618_c0_seq1.mrna1;Target=comp143618_c0_seq1 1006 1251 -
Chr2	stalkie_big_nohaplotig	CDS	12670476	12670553	.	-	0	Parent=comp143618_c0_seq1.mrna1;Target=comp143618_c0_seq1 412 489 .
Chr2	stalkie_big_nohaplotig	CDS	12670633	12670830	.	-	0	Parent=comp143618_c0_seq1.mrna1;Target=comp143618_c0_seq1 490 687 .
Chr2	stalkie_big_nohaplotig	CDS	12672252	12672410	.	-	0	Parent=comp143618_c0_seq1.mrna1;Target=comp143618_c0_seq1 688 846 .
Chr2	stalkie_big_nohaplotig	CDS	12672463	12672621	.	-	0	Parent=comp143618_c0_seq1.mrna1;Target=comp143618_c0_seq1 847 1005 .
Chr2	stalkie_big_nohaplotig	CDS	12672720	12672779	.	-	0	Parent=comp143618_c0_seq1.mrna1;Target=comp143618_c0_seq1 1006 1065 .
Chr2	gffcl	locus	12675140	12676797	.	+	.	ID=RLOC_00014851;geneIDs=comp146214_c0_seq1.path1;transcripts=comp146214_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12675140	12676797	.	+	.	ID=comp146214_c0_seq1.mrna1;geneID=comp146214_c0_seq1.path1;Name=comp146214_c0_seq1;Dir=sensecoverage=97.9;identity=99.8;matches=894;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014851
Chr2	stalkie_big_nohaplotig	exon	12675140	12675336	100	+	.	Parent=comp146214_c0_seq1.mrna1;Target=comp146214_c0_seq1 1 197 +
Chr2	stalkie_big_nohaplotig	exon	12675573	12675737	99	+	.	Parent=comp146214_c0_seq1.mrna1;Target=comp146214_c0_seq1 198 362 +
Chr2	stalkie_big_nohaplotig	exon	12675817	12675978	100	+	.	Parent=comp146214_c0_seq1.mrna1;Target=comp146214_c0_seq1 363 524 +
Chr2	stalkie_big_nohaplotig	exon	12676053	12676247	99	+	.	Parent=comp146214_c0_seq1.mrna1;Target=comp146214_c0_seq1 525 719 +
Chr2	stalkie_big_nohaplotig	exon	12676621	12676797	100	+	.	Parent=comp146214_c0_seq1.mrna1;Target=comp146214_c0_seq1 720 896 +
Chr2	stalkie_big_nohaplotig	CDS	12675277	12675336	.	+	0	Parent=comp146214_c0_seq1.mrna1;Target=comp146214_c0_seq1 138 197 +
Chr2	stalkie_big_nohaplotig	CDS	12675573	12675737	.	+	0	Parent=comp146214_c0_seq1.mrna1;Target=comp146214_c0_seq1 198 362 +
Chr2	stalkie_big_nohaplotig	CDS	12675817	12675978	.	+	0	Parent=comp146214_c0_seq1.mrna1;Target=comp146214_c0_seq1 363 524 +
Chr2	stalkie_big_nohaplotig	CDS	12676053	12676247	.	+	0	Parent=comp146214_c0_seq1.mrna1;Target=comp146214_c0_seq1 525 719 +
Chr2	stalkie_big_nohaplotig	CDS	12676621	12676668	.	+	0	Parent=comp146214_c0_seq1.mrna1;Target=comp146214_c0_seq1 720 767 +
Chr2	gffcl	locus	12677980	12681734	.	-	.	ID=RLOC_00014852;geneIDs=FBgn0033132.1.path1;transcripts=FBgn0033132.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12677980	12681734	.	-	.	ID=FBgn0033132.1.mrna1;geneID=FBgn0033132.1.path1;Name=FBgn0033132.1;Dir=sensecoverage=100.0;identity=99.6;matches=681;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014852
Chr2	stalkie_big_nohaplotig	exon	12677980	12678063	100	-	.	Parent=FBgn0033132.1.mrna1;Target=FBgn0033132.1 601 684 +
Chr2	stalkie_big_nohaplotig	exon	12678118	12678318	100	-	.	Parent=FBgn0033132.1.mrna1;Target=FBgn0033132.1 400 600 +
Chr2	stalkie_big_nohaplotig	exon	12678385	12678546	98	-	.	Parent=FBgn0033132.1.mrna1;Target=FBgn0033132.1 238 399 +
Chr2	stalkie_big_nohaplotig	exon	12678829	12678990	100	-	.	Parent=FBgn0033132.1.mrna1;Target=FBgn0033132.1 76 237 +
Chr2	stalkie_big_nohaplotig	exon	12681660	12681734	100	-	.	Parent=FBgn0033132.1.mrna1;Target=FBgn0033132.1 1 75 +
Chr2	stalkie_big_nohaplotig	CDS	12677980	12678063	.	-	0	Parent=FBgn0033132.1.mrna1;Target=FBgn0033132.1 601 684 +
Chr2	stalkie_big_nohaplotig	CDS	12678118	12678318	.	-	0	Parent=FBgn0033132.1.mrna1;Target=FBgn0033132.1 400 600 +
Chr2	stalkie_big_nohaplotig	CDS	12678385	12678546	.	-	0	Parent=FBgn0033132.1.mrna1;Target=FBgn0033132.1 238 399 +
Chr2	stalkie_big_nohaplotig	CDS	12678829	12678990	.	-	0	Parent=FBgn0033132.1.mrna1;Target=FBgn0033132.1 76 237 +
Chr2	stalkie_big_nohaplotig	CDS	12681660	12681734	.	-	0	Parent=FBgn0033132.1.mrna1;Target=FBgn0033132.1 1 75 +
Chr2	gffcl	locus	12684675	12687316	.	-	.	ID=RLOC_00014853;geneIDs=FBgn0033130.1.path1;transcripts=FBgn0033130.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12684675	12687316	.	-	.	ID=FBgn0033130.1.mrna1;geneID=FBgn0033130.1.path1;Name=FBgn0033130.1;Dir=sensecoverage=100.0;identity=99.2;matches=765;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014853
Chr2	stalkie_big_nohaplotig	exon	12684675	12684752	100	-	.	Parent=FBgn0033130.1.mrna1;Target=FBgn0033130.1 694 771 +
Chr2	stalkie_big_nohaplotig	exon	12684817	12685014	97	-	.	Parent=FBgn0033130.1.mrna1;Target=FBgn0033130.1 496 693 +
Chr2	stalkie_big_nohaplotig	exon	12685081	12685257	99	-	.	Parent=FBgn0033130.1.mrna1;Target=FBgn0033130.1 319 495 +
Chr2	stalkie_big_nohaplotig	exon	12685401	12685583	100	-	.	Parent=FBgn0033130.1.mrna1;Target=FBgn0033130.1 136 318 +
Chr2	stalkie_big_nohaplotig	exon	12687182	12687316	100	-	.	Parent=FBgn0033130.1.mrna1;Target=FBgn0033130.1 1 135 +
Chr2	stalkie_big_nohaplotig	CDS	12684675	12684752	.	-	0	Parent=FBgn0033130.1.mrna1;Target=FBgn0033130.1 694 771 +
Chr2	stalkie_big_nohaplotig	CDS	12684817	12685014	.	-	0	Parent=FBgn0033130.1.mrna1;Target=FBgn0033130.1 496 693 +
Chr2	stalkie_big_nohaplotig	CDS	12685081	12685257	.	-	0	Parent=FBgn0033130.1.mrna1;Target=FBgn0033130.1 319 495 +
Chr2	stalkie_big_nohaplotig	CDS	12685401	12685583	.	-	0	Parent=FBgn0033130.1.mrna1;Target=FBgn0033130.1 136 318 +
Chr2	stalkie_big_nohaplotig	CDS	12687182	12687316	.	-	0	Parent=FBgn0033130.1.mrna1;Target=FBgn0033130.1 1 135 +
Chr2	gffcl	locus	12689032	12692204	.	-	.	ID=RLOC_00014854;geneIDs=FBgn0033129.1.path1;transcripts=FBgn0033129.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12689032	12692204	.	-	.	ID=FBgn0033129.1.mrna1;geneID=FBgn0033129.1.path1;Name=FBgn0033129.1;Dir=sensecoverage=100.0;identity=99.9;matches=732;mismatches=0;indels=1;unknowns=0;locus=RLOC_00014854
Chr2	stalkie_big_nohaplotig	exon	12689032	12689106	100	-	.	Parent=FBgn0033129.1.mrna1;Target=FBgn0033129.1 658 732 +
Chr2	stalkie_big_nohaplotig	exon	12689169	12689370	99	-	.	Parent=FBgn0033129.1.mrna1;Target=FBgn0033129.1 457 657 +
Chr2	stalkie_big_nohaplotig	exon	12689439	12689603	100	-	.	Parent=FBgn0033129.1.mrna1;Target=FBgn0033129.1 292 456 +
Chr2	stalkie_big_nohaplotig	exon	12689661	12689852	100	-	.	Parent=FBgn0033129.1.mrna1;Target=FBgn0033129.1 100 291 +
Chr2	stalkie_big_nohaplotig	exon	12692106	12692204	100	-	.	Parent=FBgn0033129.1.mrna1;Target=FBgn0033129.1 1 99 +
Chr2	stalkie_big_nohaplotig	CDS	12689032	12689106	.	-	2	Parent=FBgn0033129.1.mrna1;Target=FBgn0033129.1 658 732 +
Chr2	stalkie_big_nohaplotig	CDS	12689169	12689370	.	-	0	Parent=FBgn0033129.1.mrna1;Target=FBgn0033129.1 457 657 +
Chr2	stalkie_big_nohaplotig	CDS	12689439	12689603	.	-	0	Parent=FBgn0033129.1.mrna1;Target=FBgn0033129.1 292 456 +
Chr2	stalkie_big_nohaplotig	CDS	12689661	12689852	.	-	0	Parent=FBgn0033129.1.mrna1;Target=FBgn0033129.1 100 291 +
Chr2	stalkie_big_nohaplotig	CDS	12692106	12692204	.	-	0	Parent=FBgn0033129.1.mrna1;Target=FBgn0033129.1 1 99 +
Chr2	gffcl	locus	12692393	12692710	.	+	.	ID=RLOC_00014855;geneIDs=comp552432_c0_seq1.path1;transcripts=comp552432_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12692393	12692710	.	+	.	ID=comp552432_c0_seq1.mrna1;geneID=comp552432_c0_seq1.path1;Name=comp552432_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=317;mismatches=1;indels=0;unknowns=0;Target=comp552432_c0_seq1 318 1 .;CDS_Target=comp552432_c0_seq1 24 1 .;locus=RLOC_00014855
Chr2	stalkie_big_nohaplotig	exon	12692393	12692710	99	+	.	Parent=comp552432_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12692393	12692416	.	+	0	Parent=comp552432_c0_seq1.mrna1
Chr2	gffcl	locus	12696579	12711103	.	-	.	ID=RLOC_00014856;geneIDs=FBgn0033128.1.path1;transcripts=FBgn0033128.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12696579	12711103	.	-	.	ID=FBgn0033128.1.mrna1;geneID=FBgn0033128.1.path1;Name=FBgn0033128.1;Dir=sensecoverage=100.0;identity=99.4;matches=662;mismatches=4;indels=0;unknowns=0;locus=RLOC_00014856
Chr2	stalkie_big_nohaplotig	exon	12696579	12696656	100	-	.	Parent=FBgn0033128.1.mrna1;Target=FBgn0033128.1 589 666 +
Chr2	stalkie_big_nohaplotig	exon	12696722	12696892	100	-	.	Parent=FBgn0033128.1.mrna1;Target=FBgn0033128.1 418 588 +
Chr2	stalkie_big_nohaplotig	exon	12697032	12697208	98	-	.	Parent=FBgn0033128.1.mrna1;Target=FBgn0033128.1 241 417 +
Chr2	stalkie_big_nohaplotig	exon	12697289	12697453	98	-	.	Parent=FBgn0033128.1.mrna1;Target=FBgn0033128.1 76 240 +
Chr2	stalkie_big_nohaplotig	exon	12711029	12711103	100	-	.	Parent=FBgn0033128.1.mrna1;Target=FBgn0033128.1 1 75 +
Chr2	stalkie_big_nohaplotig	CDS	12696579	12696656	.	-	0	Parent=FBgn0033128.1.mrna1;Target=FBgn0033128.1 589 666 +
Chr2	stalkie_big_nohaplotig	CDS	12696722	12696892	.	-	0	Parent=FBgn0033128.1.mrna1;Target=FBgn0033128.1 418 588 +
Chr2	stalkie_big_nohaplotig	CDS	12697032	12697208	.	-	0	Parent=FBgn0033128.1.mrna1;Target=FBgn0033128.1 241 417 +
Chr2	stalkie_big_nohaplotig	CDS	12697289	12697453	.	-	0	Parent=FBgn0033128.1.mrna1;Target=FBgn0033128.1 76 240 +
Chr2	stalkie_big_nohaplotig	CDS	12711029	12711103	.	-	0	Parent=FBgn0033128.1.mrna1;Target=FBgn0033128.1 1 75 +
Chr2	gffcl	locus	12715806	12735018	.	-	.	ID=RLOC_00014857;geneIDs=FBgn0033127.1.path1;transcripts=FBgn0033127.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12715806	12735018	.	-	.	ID=FBgn0033127.1.mrna1;geneID=FBgn0033127.1.path1;Name=FBgn0033127.1;Dir=sensecoverage=100.0;identity=99.4;matches=702;mismatches=4;indels=0;unknowns=2;locus=RLOC_00014857
Chr2	stalkie_big_nohaplotig	exon	12715806	12715874	100	-	.	Parent=FBgn0033127.1.mrna1;Target=FBgn0033127.1 640 708 +
Chr2	stalkie_big_nohaplotig	exon	12715942	12716139	97	-	.	Parent=FBgn0033127.1.mrna1;Target=FBgn0033127.1 442 639 +
Chr2	stalkie_big_nohaplotig	exon	12716200	12716361	100	-	.	Parent=FBgn0033127.1.mrna1;Target=FBgn0033127.1 280 441 +
Chr2	stalkie_big_nohaplotig	exon	12716430	12716603	100	-	.	Parent=FBgn0033127.1.mrna1;Target=FBgn0033127.1 106 279 +
Chr2	stalkie_big_nohaplotig	exon	12734914	12735018	100	-	.	Parent=FBgn0033127.1.mrna1;Target=FBgn0033127.1 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	12715806	12715874	.	-	0	Parent=FBgn0033127.1.mrna1;Target=FBgn0033127.1 640 708 +
Chr2	stalkie_big_nohaplotig	CDS	12715942	12716139	.	-	0	Parent=FBgn0033127.1.mrna1;Target=FBgn0033127.1 442 639 +
Chr2	stalkie_big_nohaplotig	CDS	12716200	12716361	.	-	0	Parent=FBgn0033127.1.mrna1;Target=FBgn0033127.1 280 441 +
Chr2	stalkie_big_nohaplotig	CDS	12716430	12716603	.	-	0	Parent=FBgn0033127.1.mrna1;Target=FBgn0033127.1 106 279 +
Chr2	stalkie_big_nohaplotig	CDS	12734914	12735018	.	-	0	Parent=FBgn0033127.1.mrna1;Target=FBgn0033127.1 1 105 +
Chr2	gffcl	locus	12720023	12720347	.	-	.	ID=RLOC_00014858;geneIDs=comp162342_c1_seq1.path1;transcripts=comp162342_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12720023	12720347	.	-	.	ID=comp162342_c1_seq1.mrna1;geneID=comp162342_c1_seq1.path1;Name=comp162342_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=317;mismatches=8;indels=0;unknowns=0;Target=comp162342_c1_seq1 325 1 .;CDS_Target=comp162342_c1_seq1 88 2 .;locus=RLOC_00014858
Chr2	stalkie_big_nohaplotig	exon	12720023	12720347	97	-	.	Parent=comp162342_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12720260	12720346	.	-	0	Parent=comp162342_c1_seq1.mrna1
Chr2	gffcl	locus	12735033	12735749	.	-	.	ID=RLOC_00014859;geneIDs=comp146235_c0_seq1.path1;transcripts=comp146235_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12735033	12735749	.	-	.	ID=comp146235_c0_seq1.mrna1;geneID=comp146235_c0_seq1.path1;Name=comp146235_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=717;mismatches=0;indels=0;unknowns=0;Target=comp146235_c0_seq1 717 1 .;CDS_Target=comp146235_c0_seq1 101 3 .;locus=RLOC_00014859
Chr2	stalkie_big_nohaplotig	exon	12735033	12735749	100	-	.	Parent=comp146235_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12735649	12735747	.	-	0	Parent=comp146235_c0_seq1.mrna1
Chr2	gffcl	locus	12740331	12762262	.	-	.	ID=RLOC_00014860;geneIDs=FBgn0029506.1.path1;transcripts=FBgn0029506.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12740331	12762262	.	-	.	ID=FBgn0029506.1.mrna1;geneID=FBgn0029506.1.path1;Name=FBgn0029506.1;Dir=sensecoverage=100.0;identity=100.0;matches=693;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014860
Chr2	stalkie_big_nohaplotig	exon	12740331	12740399	100	-	.	Parent=FBgn0029506.1.mrna1;Target=FBgn0029506.1 625 693 +
Chr2	stalkie_big_nohaplotig	exon	12740545	12740739	100	-	.	Parent=FBgn0029506.1.mrna1;Target=FBgn0029506.1 430 624 +
Chr2	stalkie_big_nohaplotig	exon	12740814	12741173	100	-	.	Parent=FBgn0029506.1.mrna1;Target=FBgn0029506.1 70 429 +
Chr2	stalkie_big_nohaplotig	exon	12762194	12762262	100	-	.	Parent=FBgn0029506.1.mrna1;Target=FBgn0029506.1 1 69 +
Chr2	stalkie_big_nohaplotig	CDS	12740331	12740399	.	-	0	Parent=FBgn0029506.1.mrna1;Target=FBgn0029506.1 625 693 +
Chr2	stalkie_big_nohaplotig	CDS	12740545	12740739	.	-	0	Parent=FBgn0029506.1.mrna1;Target=FBgn0029506.1 430 624 +
Chr2	stalkie_big_nohaplotig	CDS	12740814	12741173	.	-	0	Parent=FBgn0029506.1.mrna1;Target=FBgn0029506.1 70 429 +
Chr2	stalkie_big_nohaplotig	CDS	12762194	12762262	.	-	0	Parent=FBgn0029506.1.mrna1;Target=FBgn0029506.1 1 69 +
Chr2	gffcl	locus	12747627	12748253	.	+	.	ID=RLOC_00014861;geneIDs=FBgn0026380.1.path1;transcripts=FBgn0026380.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12747627	12748253	.	+	.	ID=FBgn0026380.1.mrna1;geneID=FBgn0026380.1.path1;Name=FBgn0026380.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=625;mismatches=2;indels=0;unknowns=0;Target=FBgn0026380.1 627 1 .;locus=RLOC_00014861
Chr2	stalkie_big_nohaplotig	exon	12747627	12748253	99	+	.	Parent=FBgn0026380.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12747627	12748253	.	+	0	Parent=FBgn0026380.1.mrna1
Chr2	gffcl	locus	12768140	12772647	.	-	.	ID=RLOC_00014862;geneIDs=FBgn0029507.1.path1;transcripts=FBgn0029507.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12768140	12772647	.	-	.	ID=FBgn0029507.1.mrna1;geneID=FBgn0029507.1.path1;Name=FBgn0029507.1;Dir=sensecoverage=100.0;identity=99.9;matches=689;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014862
Chr2	stalkie_big_nohaplotig	exon	12768140	12768208	100	-	.	Parent=FBgn0029507.1.mrna1;Target=FBgn0029507.1 622 690 +
Chr2	stalkie_big_nohaplotig	exon	12768272	12768469	100	-	.	Parent=FBgn0029507.1.mrna1;Target=FBgn0029507.1 424 621 +
Chr2	stalkie_big_nohaplotig	exon	12768522	12768683	99	-	.	Parent=FBgn0029507.1.mrna1;Target=FBgn0029507.1 262 423 +
Chr2	stalkie_big_nohaplotig	exon	12768743	12768934	100	-	.	Parent=FBgn0029507.1.mrna1;Target=FBgn0029507.1 70 261 +
Chr2	stalkie_big_nohaplotig	exon	12772579	12772647	100	-	.	Parent=FBgn0029507.1.mrna1;Target=FBgn0029507.1 1 69 +
Chr2	stalkie_big_nohaplotig	CDS	12768140	12768208	.	-	0	Parent=FBgn0029507.1.mrna1;Target=FBgn0029507.1 622 690 +
Chr2	stalkie_big_nohaplotig	CDS	12768272	12768469	.	-	0	Parent=FBgn0029507.1.mrna1;Target=FBgn0029507.1 424 621 +
Chr2	stalkie_big_nohaplotig	CDS	12768522	12768683	.	-	0	Parent=FBgn0029507.1.mrna1;Target=FBgn0029507.1 262 423 +
Chr2	stalkie_big_nohaplotig	CDS	12768743	12768934	.	-	0	Parent=FBgn0029507.1.mrna1;Target=FBgn0029507.1 70 261 +
Chr2	stalkie_big_nohaplotig	CDS	12772579	12772647	.	-	0	Parent=FBgn0029507.1.mrna1;Target=FBgn0029507.1 1 69 +
Chr2	gffcl	locus	12775938	12778830	.	-	.	ID=RLOC_00014863;geneIDs=FBgn0042086.2.path1;transcripts=FBgn0042086.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12775938	12778830	.	-	.	ID=FBgn0042086.2.mrna1;geneID=FBgn0042086.2.path1;Name=FBgn0042086.2;Dir=sensecoverage=100.0;identity=99.9;matches=692;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014863
Chr2	stalkie_big_nohaplotig	exon	12775938	12776225	100	-	.	Parent=FBgn0042086.2.mrna1;Target=FBgn0042086.2 406 693 +
Chr2	stalkie_big_nohaplotig	exon	12776295	12776459	100	-	.	Parent=FBgn0042086.2.mrna1;Target=FBgn0042086.2 241 405 +
Chr2	stalkie_big_nohaplotig	exon	12776527	12776712	100	-	.	Parent=FBgn0042086.2.mrna1;Target=FBgn0042086.2 55 240 +
Chr2	stalkie_big_nohaplotig	exon	12778777	12778830	98	-	.	Parent=FBgn0042086.2.mrna1;Target=FBgn0042086.2 1 54 +
Chr2	stalkie_big_nohaplotig	CDS	12775938	12776225	.	-	0	Parent=FBgn0042086.2.mrna1;Target=FBgn0042086.2 406 693 +
Chr2	stalkie_big_nohaplotig	CDS	12776295	12776459	.	-	0	Parent=FBgn0042086.2.mrna1;Target=FBgn0042086.2 241 405 +
Chr2	stalkie_big_nohaplotig	CDS	12776527	12776712	.	-	0	Parent=FBgn0042086.2.mrna1;Target=FBgn0042086.2 55 240 +
Chr2	stalkie_big_nohaplotig	CDS	12778777	12778830	.	-	0	Parent=FBgn0042086.2.mrna1;Target=FBgn0042086.2 1 54 +
Chr2	gffcl	locus	12779586	12787264	.	-	.	ID=RLOC_00014864;geneIDs=comp154581_c0_seq1.path1;transcripts=comp154581_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12779586	12787264	.	-	.	ID=comp154581_c0_seq1.mrna1;geneID=comp154581_c0_seq1.path1;Name=comp154581_c0_seq1;Dir=sensecoverage=100.0;identity=98.9;matches=1767;mismatches=15;indels=4;unknowns=0;locus=RLOC_00014864
Chr2	stalkie_big_nohaplotig	exon	12779586	12780781	98	-	.	Parent=comp154581_c0_seq1.mrna1;Target=comp154581_c0_seq1 587 1786 +
Chr2	stalkie_big_nohaplotig	exon	12780844	12781026	100	-	.	Parent=comp154581_c0_seq1.mrna1;Target=comp154581_c0_seq1 404 586 +
Chr2	stalkie_big_nohaplotig	exon	12783192	12783276	100	-	.	Parent=comp154581_c0_seq1.mrna1;Target=comp154581_c0_seq1 319 403 +
Chr2	stalkie_big_nohaplotig	exon	12786947	12787264	99	-	.	Parent=comp154581_c0_seq1.mrna1;Target=comp154581_c0_seq1 1 318 +
Chr2	stalkie_big_nohaplotig	CDS	12780539	12780781	.	-	0	Parent=comp154581_c0_seq1.mrna1;Target=comp154581_c0_seq1 587 829 +
Chr2	stalkie_big_nohaplotig	CDS	12780844	12781026	.	-	0	Parent=comp154581_c0_seq1.mrna1;Target=comp154581_c0_seq1 404 586 +
Chr2	stalkie_big_nohaplotig	CDS	12783192	12783251	.	-	0	Parent=comp154581_c0_seq1.mrna1;Target=comp154581_c0_seq1 344 403 +
Chr2	gffcl	locus	12789916	12793485	.	-	.	ID=RLOC_00014865;geneIDs=FBgn0042086.1.path1;transcripts=FBgn0042086.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12789916	12793485	.	-	.	ID=FBgn0042086.1.mrna1;geneID=FBgn0042086.1.path1;Name=FBgn0042086.1;Dir=sensecoverage=100.0;identity=100.0;matches=684;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014865
Chr2	stalkie_big_nohaplotig	exon	12789916	12790164	100	-	.	Parent=FBgn0042086.1.mrna1;Target=FBgn0042086.1 436 684 +
Chr2	stalkie_big_nohaplotig	exon	12790235	12790399	100	-	.	Parent=FBgn0042086.1.mrna1;Target=FBgn0042086.1 271 435 +
Chr2	stalkie_big_nohaplotig	exon	12790468	12790659	100	-	.	Parent=FBgn0042086.1.mrna1;Target=FBgn0042086.1 79 270 +
Chr2	stalkie_big_nohaplotig	exon	12793408	12793485	100	-	.	Parent=FBgn0042086.1.mrna1;Target=FBgn0042086.1 1 78 +
Chr2	stalkie_big_nohaplotig	CDS	12789916	12790164	.	-	0	Parent=FBgn0042086.1.mrna1;Target=FBgn0042086.1 436 684 +
Chr2	stalkie_big_nohaplotig	CDS	12790235	12790399	.	-	0	Parent=FBgn0042086.1.mrna1;Target=FBgn0042086.1 271 435 +
Chr2	stalkie_big_nohaplotig	CDS	12790468	12790659	.	-	0	Parent=FBgn0042086.1.mrna1;Target=FBgn0042086.1 79 270 +
Chr2	stalkie_big_nohaplotig	CDS	12793408	12793485	.	-	0	Parent=FBgn0042086.1.mrna1;Target=FBgn0042086.1 1 78 +
Chr2	gffcl	locus	12791917	12792464	.	+	.	ID=RLOC_00014866;geneIDs=comp1349932_c0_seq1.path1;transcripts=comp1349932_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12791917	12792464	.	+	.	ID=comp1349932_c0_seq1.mrna1;geneID=comp1349932_c0_seq1.path1;Name=comp1349932_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=545;mismatches=2;indels=1;unknowns=0;Target=comp1349932_c0_seq1 547 1 .;CDS_Target=comp1349932_c0_seq1 397 284 .;locus=RLOC_00014866
Chr2	stalkie_big_nohaplotig	exon	12791917	12792464	99	+	.	Parent=comp1349932_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12792200	12792314	.	+	0	Parent=comp1349932_c0_seq1.mrna1
Chr2	gffcl	locus	12800566	12809681	.	.	.	ID=RLOC_00014867;geneIDs=FBgn0029508.1.path1,comp144960_c0_seq1.path1;transcripts=FBgn0029508.1.mrna1,comp144960_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12800566	12809681	.	-	.	ID=FBgn0029508.1.mrna1;geneID=FBgn0029508.1.path1;Name=FBgn0029508.1;Dir=sensecoverage=100.0;identity=99.7;matches=688;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014867
Chr2	stalkie_big_nohaplotig	exon	12800566	12800634	100	-	.	Parent=FBgn0029508.1.mrna1;Target=FBgn0029508.1 622 690 +
Chr2	stalkie_big_nohaplotig	exon	12801181	12801375	100	-	.	Parent=FBgn0029508.1.mrna1;Target=FBgn0029508.1 427 621 +
Chr2	stalkie_big_nohaplotig	exon	12801501	12801662	100	-	.	Parent=FBgn0029508.1.mrna1;Target=FBgn0029508.1 265 426 +
Chr2	stalkie_big_nohaplotig	exon	12801754	12801945	98	-	.	Parent=FBgn0029508.1.mrna1;Target=FBgn0029508.1 73 264 +
Chr2	stalkie_big_nohaplotig	exon	12809610	12809681	100	-	.	Parent=FBgn0029508.1.mrna1;Target=FBgn0029508.1 1 72 +
Chr2	stalkie_big_nohaplotig	CDS	12800566	12800634	.	-	0	Parent=FBgn0029508.1.mrna1;Target=FBgn0029508.1 622 690 +
Chr2	stalkie_big_nohaplotig	CDS	12801181	12801375	.	-	0	Parent=FBgn0029508.1.mrna1;Target=FBgn0029508.1 427 621 +
Chr2	stalkie_big_nohaplotig	CDS	12801501	12801662	.	-	0	Parent=FBgn0029508.1.mrna1;Target=FBgn0029508.1 265 426 +
Chr2	stalkie_big_nohaplotig	CDS	12801754	12801945	.	-	0	Parent=FBgn0029508.1.mrna1;Target=FBgn0029508.1 73 264 +
Chr2	stalkie_big_nohaplotig	CDS	12809610	12809681	.	-	0	Parent=FBgn0029508.1.mrna1;Target=FBgn0029508.1 1 72 +
Chr2	stalkie_big_nohaplotig	mRNA	12800889	12801203	.	+	.	ID=comp144960_c0_seq1.mrna1;geneID=comp144960_c0_seq1.path1;Name=comp144960_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=315;mismatches=0;indels=0;unknowns=0;Target=comp144960_c0_seq1 315 1 .;CDS_Target=comp144960_c0_seq1 85 2 .;locus=RLOC_00014867
Chr2	stalkie_big_nohaplotig	exon	12800889	12801203	100	+	.	Parent=comp144960_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12800890	12800973	.	+	0	Parent=comp144960_c0_seq1.mrna1
Chr2	gffcl	locus	12810100	12810879	.	-	.	ID=RLOC_00014868;geneIDs=FBgn0050159.1.path1;transcripts=FBgn0050159.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12810100	12810879	.	-	.	ID=FBgn0050159.1.mrna1;geneID=FBgn0050159.1.path1;Name=FBgn0050159.1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=769;mismatches=11;indels=0;unknowns=0;Target=FBgn0050159.1 780 1 .;locus=RLOC_00014868
Chr2	stalkie_big_nohaplotig	exon	12810100	12810879	98	-	.	Parent=FBgn0050159.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12810100	12810879	.	-	0	Parent=FBgn0050159.1.mrna1
Chr2	gffcl	locus	12819543	12821325	.	-	.	ID=RLOC_00014869;geneIDs=FBgn0033122.1.path1;transcripts=FBgn0033122.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12819543	12821325	.	-	.	ID=FBgn0033122.1.mrna1;geneID=FBgn0033122.1.path1;Name=FBgn0033122.1;Dir=sensecoverage=100.0;identity=100.0;matches=1239;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014869
Chr2	stalkie_big_nohaplotig	exon	12819543	12819695	100	-	.	Parent=FBgn0033122.1.mrna1;Target=FBgn0033122.1 1087 1239 +
Chr2	stalkie_big_nohaplotig	exon	12819765	12820228	100	-	.	Parent=FBgn0033122.1.mrna1;Target=FBgn0033122.1 623 1086 +
Chr2	stalkie_big_nohaplotig	exon	12820301	12820351	100	-	.	Parent=FBgn0033122.1.mrna1;Target=FBgn0033122.1 572 622 +
Chr2	stalkie_big_nohaplotig	exon	12820621	12820711	100	-	.	Parent=FBgn0033122.1.mrna1;Target=FBgn0033122.1 481 571 +
Chr2	stalkie_big_nohaplotig	exon	12820780	12821093	100	-	.	Parent=FBgn0033122.1.mrna1;Target=FBgn0033122.1 167 480 +
Chr2	stalkie_big_nohaplotig	exon	12821160	12821325	100	-	.	Parent=FBgn0033122.1.mrna1;Target=FBgn0033122.1 1 166 +
Chr2	stalkie_big_nohaplotig	CDS	12819543	12819695	.	-	0	Parent=FBgn0033122.1.mrna1;Target=FBgn0033122.1 1087 1239 +
Chr2	stalkie_big_nohaplotig	CDS	12819765	12820228	.	-	2	Parent=FBgn0033122.1.mrna1;Target=FBgn0033122.1 623 1086 +
Chr2	stalkie_big_nohaplotig	CDS	12820301	12820351	.	-	2	Parent=FBgn0033122.1.mrna1;Target=FBgn0033122.1 572 622 +
Chr2	stalkie_big_nohaplotig	CDS	12820621	12820711	.	-	0	Parent=FBgn0033122.1.mrna1;Target=FBgn0033122.1 481 571 +
Chr2	stalkie_big_nohaplotig	CDS	12820780	12821093	.	-	2	Parent=FBgn0033122.1.mrna1;Target=FBgn0033122.1 167 480 +
Chr2	stalkie_big_nohaplotig	CDS	12821160	12821325	.	-	0	Parent=FBgn0033122.1.mrna1;Target=FBgn0033122.1 1 166 +
Chr2	gffcl	locus	12823353	12842243	.	+	.	ID=RLOC_00014870;geneIDs=FBgn0033661.1.path1;transcripts=FBgn0033661.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12823353	12842243	.	+	.	ID=FBgn0033661.1.mrna1;geneID=FBgn0033661.1.path1;Name=FBgn0033661.1;Dir=sensecoverage=100.0;identity=99.1;matches=16661;mismatches=139;indels=9;unknowns=0;locus=RLOC_00014870
Chr2	stalkie_big_nohaplotig	exon	12823353	12823475	100	+	.	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 1 123 +
Chr2	stalkie_big_nohaplotig	exon	12823544	12823770	100	+	.	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 124 350 +
Chr2	stalkie_big_nohaplotig	exon	12823837	12824797	99	+	.	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 351 1311 +
Chr2	stalkie_big_nohaplotig	exon	12824862	12825025	100	+	.	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 1312 1475 +
Chr2	stalkie_big_nohaplotig	exon	12825645	12830952	99	+	.	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 1476 6783 +
Chr2	stalkie_big_nohaplotig	exon	12831020	12831179	96	+	.	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 6784 6943 +
Chr2	stalkie_big_nohaplotig	exon	12831877	12833705	98	+	.	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 6944 8778 +
Chr2	stalkie_big_nohaplotig	exon	12833761	12840309	99	+	.	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 8779 15330 +
Chr2	stalkie_big_nohaplotig	exon	12840369	12840495	100	+	.	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 15331 15457 +
Chr2	stalkie_big_nohaplotig	exon	12840616	12841075	100	+	.	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 15458 15917 +
Chr2	stalkie_big_nohaplotig	exon	12841148	12841253	100	+	.	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 15918 16023 +
Chr2	stalkie_big_nohaplotig	exon	12841332	12841937	100	+	.	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 16024 16629 +
Chr2	stalkie_big_nohaplotig	exon	12842001	12842078	100	+	.	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 16630 16707 +
Chr2	stalkie_big_nohaplotig	exon	12842142	12842243	100	+	.	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 16708 16809 +
Chr2	stalkie_big_nohaplotig	CDS	12823353	12823475	.	+	0	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 1 123 +
Chr2	stalkie_big_nohaplotig	CDS	12823544	12823770	.	+	0	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 124 350 +
Chr2	stalkie_big_nohaplotig	CDS	12823837	12824797	.	+	1	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 351 1311 +
Chr2	stalkie_big_nohaplotig	CDS	12824862	12825025	.	+	0	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 1312 1475 +
Chr2	stalkie_big_nohaplotig	CDS	12825645	12830952	.	+	1	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 1476 6783 +
Chr2	stalkie_big_nohaplotig	CDS	12831020	12831179	.	+	0	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 6784 6943 +
Chr2	stalkie_big_nohaplotig	CDS	12831877	12833705	.	+	2	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 6944 8778 +
Chr2	stalkie_big_nohaplotig	CDS	12833761	12840309	.	+	0	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 8779 15330 +
Chr2	stalkie_big_nohaplotig	CDS	12840369	12840495	.	+	0	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 15331 15457 +
Chr2	stalkie_big_nohaplotig	CDS	12840616	12841075	.	+	2	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 15458 15917 +
Chr2	stalkie_big_nohaplotig	CDS	12841148	12841253	.	+	1	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 15918 16023 +
Chr2	stalkie_big_nohaplotig	CDS	12841332	12841937	.	+	0	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 16024 16629 +
Chr2	stalkie_big_nohaplotig	CDS	12842001	12842078	.	+	0	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 16630 16707 +
Chr2	stalkie_big_nohaplotig	CDS	12842142	12842243	.	+	0	Parent=FBgn0033661.1.mrna1;Target=FBgn0033661.1 16708 16809 +
Chr2	gffcl	locus	12853720	12864137	.	.	.	ID=RLOC_00014872;geneIDs=FBgn0034345.1.path1,comp145712_c0_seq1.path1;transcripts=FBgn0034345.1.mrna1,comp145712_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12853720	12864137	.	-	.	ID=FBgn0034345.1.mrna1;geneID=FBgn0034345.1.path1;Name=FBgn0034345.1;Dir=sensecoverage=100.0;identity=100.0;matches=669;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014872
Chr2	stalkie_big_nohaplotig	exon	12853720	12853824	100	-	.	Parent=FBgn0034345.1.mrna1;Target=FBgn0034345.1 565 669 +
Chr2	stalkie_big_nohaplotig	exon	12854222	12854426	100	-	.	Parent=FBgn0034345.1.mrna1;Target=FBgn0034345.1 360 564 +
Chr2	stalkie_big_nohaplotig	exon	12855877	12855936	100	-	.	Parent=FBgn0034345.1.mrna1;Target=FBgn0034345.1 300 359 +
Chr2	stalkie_big_nohaplotig	exon	12856099	12856259	100	-	.	Parent=FBgn0034345.1.mrna1;Target=FBgn0034345.1 139 299 +
Chr2	stalkie_big_nohaplotig	exon	12856322	12856446	100	-	.	Parent=FBgn0034345.1.mrna1;Target=FBgn0034345.1 14 138 +
Chr2	stalkie_big_nohaplotig	exon	12864125	12864137	100	-	.	Parent=FBgn0034345.1.mrna1;Target=FBgn0034345.1 1 13 +
Chr2	stalkie_big_nohaplotig	CDS	12853720	12853824	.	-	0	Parent=FBgn0034345.1.mrna1;Target=FBgn0034345.1 565 669 +
Chr2	stalkie_big_nohaplotig	CDS	12854222	12854426	.	-	1	Parent=FBgn0034345.1.mrna1;Target=FBgn0034345.1 360 564 +
Chr2	stalkie_big_nohaplotig	CDS	12855877	12855936	.	-	1	Parent=FBgn0034345.1.mrna1;Target=FBgn0034345.1 300 359 +
Chr2	stalkie_big_nohaplotig	CDS	12856099	12856259	.	-	0	Parent=FBgn0034345.1.mrna1;Target=FBgn0034345.1 139 299 +
Chr2	stalkie_big_nohaplotig	CDS	12856322	12856446	.	-	2	Parent=FBgn0034345.1.mrna1;Target=FBgn0034345.1 14 138 +
Chr2	stalkie_big_nohaplotig	CDS	12864125	12864137	.	-	0	Parent=FBgn0034345.1.mrna1;Target=FBgn0034345.1 1 13 +
Chr2	stalkie_big_nohaplotig	mRNA	12853802	12854244	.	+	.	ID=comp145712_c0_seq1.mrna1;geneID=comp145712_c0_seq1.path1;Name=comp145712_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=443;mismatches=0;indels=0;unknowns=0;Target=comp145712_c0_seq1 443 1 .;CDS_Target=comp145712_c0_seq1 247 77 .;locus=RLOC_00014872
Chr2	stalkie_big_nohaplotig	exon	12853802	12854244	100	+	.	Parent=comp145712_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12853878	12854048	.	+	0	Parent=comp145712_c0_seq1.mrna1
Chr2	gffcl	locus	12854654	12855736	.	+	.	ID=RLOC_00014873;geneIDs=comp156493_c0_seq1.path1;transcripts=comp156493_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12854654	12855736	.	+	.	ID=comp156493_c0_seq1.mrna1;geneID=comp156493_c0_seq1.path1;Name=comp156493_c0_seq1;Dir=antisensecoverage=95.6;identity=86.6;matches=991;mismatches=68;indels=85;unknowns=0;Target=comp156493_c0_seq1 985 1164 .;locus=RLOC_00014873
Chr2	stalkie_big_nohaplotig	exon	12854654	12855054	97	+	.	Parent=comp156493_c0_seq1.mrna1;Target=comp156493_c0_seq1 767 1166 -
Chr2	stalkie_big_nohaplotig	exon	12855065	12855656	79	+	.	Parent=comp156493_c0_seq1.mrna1;Target=comp156493_c0_seq1 99 766 -
Chr2	stalkie_big_nohaplotig	exon	12855667	12855736	90	+	.	Parent=comp156493_c0_seq1.mrna1;Target=comp156493_c0_seq1 27 98 -
Chr2	stalkie_big_nohaplotig	CDS	12854656	12854835	.	+	0	Parent=comp156493_c0_seq1.mrna1
Chr2	gffcl	locus	12865550	12868844	.	+	.	ID=RLOC_00014874;geneIDs=FBgn0260456.1.path1;transcripts=FBgn0260456.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12865550	12868844	.	+	.	ID=FBgn0260456.1.mrna1;geneID=FBgn0260456.1.path1;Name=FBgn0260456.1;Dir=sensecoverage=100.0;identity=99.9;matches=2058;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014874
Chr2	stalkie_big_nohaplotig	exon	12865550	12865973	100	+	.	Parent=FBgn0260456.1.mrna1;Target=FBgn0260456.1 1 424 +
Chr2	stalkie_big_nohaplotig	exon	12866046	12866143	100	+	.	Parent=FBgn0260456.1.mrna1;Target=FBgn0260456.1 425 522 +
Chr2	stalkie_big_nohaplotig	exon	12866201	12866892	100	+	.	Parent=FBgn0260456.1.mrna1;Target=FBgn0260456.1 523 1214 +
Chr2	stalkie_big_nohaplotig	exon	12866954	12867209	100	+	.	Parent=FBgn0260456.1.mrna1;Target=FBgn0260456.1 1215 1470 +
Chr2	stalkie_big_nohaplotig	exon	12868254	12868844	99	+	.	Parent=FBgn0260456.1.mrna1;Target=FBgn0260456.1 1471 2061 +
Chr2	stalkie_big_nohaplotig	CDS	12865550	12865973	.	+	0	Parent=FBgn0260456.1.mrna1;Target=FBgn0260456.1 1 424 +
Chr2	stalkie_big_nohaplotig	CDS	12866046	12866143	.	+	2	Parent=FBgn0260456.1.mrna1;Target=FBgn0260456.1 425 522 +
Chr2	stalkie_big_nohaplotig	CDS	12866201	12866892	.	+	0	Parent=FBgn0260456.1.mrna1;Target=FBgn0260456.1 523 1214 +
Chr2	stalkie_big_nohaplotig	CDS	12866954	12867209	.	+	1	Parent=FBgn0260456.1.mrna1;Target=FBgn0260456.1 1215 1470 +
Chr2	stalkie_big_nohaplotig	CDS	12868254	12868844	.	+	0	Parent=FBgn0260456.1.mrna1;Target=FBgn0260456.1 1471 2061 +
Chr2	gffcl	locus	12869338	12869906	.	+	.	ID=RLOC_00014875;geneIDs=FBgn0085243.1.path1;transcripts=FBgn0085243.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12869338	12869906	.	+	.	ID=FBgn0085243.1.mrna1;geneID=FBgn0085243.1.path1;Name=FBgn0085243.1;Dir=sensecoverage=100.0;identity=100.0;matches=453;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014875
Chr2	stalkie_big_nohaplotig	exon	12869338	12869399	100	+	.	Parent=FBgn0085243.1.mrna1;Target=FBgn0085243.1 1 62 +
Chr2	stalkie_big_nohaplotig	exon	12869462	12869540	100	+	.	Parent=FBgn0085243.1.mrna1;Target=FBgn0085243.1 63 141 +
Chr2	stalkie_big_nohaplotig	exon	12869595	12869906	100	+	.	Parent=FBgn0085243.1.mrna1;Target=FBgn0085243.1 142 453 +
Chr2	stalkie_big_nohaplotig	CDS	12869338	12869399	.	+	0	Parent=FBgn0085243.1.mrna1;Target=FBgn0085243.1 1 62 +
Chr2	stalkie_big_nohaplotig	CDS	12869462	12869540	.	+	1	Parent=FBgn0085243.1.mrna1;Target=FBgn0085243.1 63 141 +
Chr2	stalkie_big_nohaplotig	CDS	12869595	12869906	.	+	0	Parent=FBgn0085243.1.mrna1;Target=FBgn0085243.1 142 453 +
Chr2	gffcl	locus	12870265	12871091	.	-	.	ID=RLOC_00014876;geneIDs=FBgn0035046.1.path1;transcripts=FBgn0035046.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12870265	12871091	.	-	.	ID=FBgn0035046.1.mrna1;geneID=FBgn0035046.1.path1;Name=FBgn0035046.1;Dir=sensecoverage=100.0;identity=99.1;matches=526;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014876
Chr2	stalkie_big_nohaplotig	exon	12870265	12870393	99	-	.	Parent=FBgn0035046.1.mrna1;Target=FBgn0035046.1 403 531 +
Chr2	stalkie_big_nohaplotig	exon	12870452	12870542	97	-	.	Parent=FBgn0035046.1.mrna1;Target=FBgn0035046.1 312 402 +
Chr2	stalkie_big_nohaplotig	exon	12870600	12870775	98	-	.	Parent=FBgn0035046.1.mrna1;Target=FBgn0035046.1 136 311 +
Chr2	stalkie_big_nohaplotig	exon	12870957	12871091	100	-	.	Parent=FBgn0035046.1.mrna1;Target=FBgn0035046.1 1 135 +
Chr2	stalkie_big_nohaplotig	CDS	12870265	12870393	.	-	0	Parent=FBgn0035046.1.mrna1;Target=FBgn0035046.1 403 531 +
Chr2	stalkie_big_nohaplotig	CDS	12870452	12870542	.	-	1	Parent=FBgn0035046.1.mrna1;Target=FBgn0035046.1 312 402 +
Chr2	stalkie_big_nohaplotig	CDS	12870600	12870775	.	-	0	Parent=FBgn0035046.1.mrna1;Target=FBgn0035046.1 136 311 +
Chr2	stalkie_big_nohaplotig	CDS	12870957	12871091	.	-	0	Parent=FBgn0035046.1.mrna1;Target=FBgn0035046.1 1 135 +
Chr2	gffcl	locus	12872391	12873240	.	-	.	ID=RLOC_00014877;geneIDs=comp151338_c1_seq1.path1;transcripts=comp151338_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12872391	12873240	.	-	.	ID=comp151338_c1_seq1.mrna1;geneID=comp151338_c1_seq1.path1;Name=comp151338_c1_seq1;Dir=antisensecoverage=97.3;identity=97.8;matches=625;mismatches=14;indels=0;unknowns=0;Target=comp151338_c1_seq1 473 655 .;locus=RLOC_00014877
Chr2	stalkie_big_nohaplotig	exon	12872391	12872703	96	-	.	Parent=comp151338_c1_seq1.mrna1;Target=comp151338_c1_seq1 19 331 -
Chr2	stalkie_big_nohaplotig	exon	12872845	12872926	100	-	.	Parent=comp151338_c1_seq1.mrna1;Target=comp151338_c1_seq1 332 413 -
Chr2	stalkie_big_nohaplotig	exon	12872997	12873240	99	-	.	Parent=comp151338_c1_seq1.mrna1;Target=comp151338_c1_seq1 414 657 -
Chr2	stalkie_big_nohaplotig	CDS	12873056	12873238	.	-	0	Parent=comp151338_c1_seq1.mrna1
Chr2	gffcl	locus	12876133	12876855	.	-	.	ID=RLOC_00014878;geneIDs=FBgn0063499.1.path1;transcripts=FBgn0063499.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12876133	12876855	.	-	.	ID=FBgn0063499.1.mrna1;geneID=FBgn0063499.1.path1;Name=FBgn0063499.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=723;mismatches=0;indels=0;unknowns=0;Target=FBgn0063499.1 723 1 .;locus=RLOC_00014878
Chr2	stalkie_big_nohaplotig	exon	12876133	12876855	100	-	.	Parent=FBgn0063499.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12876133	12876855	.	-	0	Parent=FBgn0063499.1.mrna1
Chr2	gffcl	locus	12883666	12884370	.	+	.	ID=RLOC_00014879;geneIDs=FBgn0063498.1.path1;transcripts=FBgn0063498.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12883666	12884370	.	+	.	ID=FBgn0063498.1.mrna1;geneID=FBgn0063498.1.path1;Name=FBgn0063498.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=704;mismatches=1;indels=0;unknowns=0;Target=FBgn0063498.1 705 1 .;locus=RLOC_00014879
Chr2	stalkie_big_nohaplotig	exon	12883666	12884370	99	+	.	Parent=FBgn0063498.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12883666	12884370	.	+	0	Parent=FBgn0063498.1.mrna1
Chr2	gffcl	locus	12884839	12885234	.	+	.	ID=RLOC_00014880;geneIDs=FBgn0034335.path1;transcripts=FBgn0034335.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12884839	12885234	.	+	.	ID=FBgn0034335.mrna1;geneID=FBgn0034335.path1;Name=FBgn0034335;Dir=indeterminatecoverage=100.0;identity=99.2;matches=393;mismatches=3;indels=0;unknowns=0;Target=FBgn0034335 396 1 .;locus=RLOC_00014880
Chr2	stalkie_big_nohaplotig	exon	12884839	12885234	99	+	.	Parent=FBgn0034335.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12884839	12885234	.	+	0	Parent=FBgn0034335.mrna1
Chr2	gffcl	locus	12892940	12893608	.	+	.	ID=RLOC_00014881;geneIDs=FBgn0063493.2.path1;transcripts=FBgn0063493.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12892940	12893608	.	+	.	ID=FBgn0063493.2.mrna1;geneID=FBgn0063493.2.path1;Name=FBgn0063493.2;Dir=indeterminatecoverage=100.0;identity=96.6;matches=646;mismatches=23;indels=0;unknowns=0;Target=FBgn0063493.2 669 1 .;locus=RLOC_00014881
Chr2	stalkie_big_nohaplotig	exon	12892940	12893608	96	+	.	Parent=FBgn0063493.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12892940	12893608	.	+	0	Parent=FBgn0063493.2.mrna1
Chr2	gffcl	locus	12897460	12897855	.	+	.	ID=RLOC_00014882;geneIDs=FBgn0034335.path2;transcripts=FBgn0034335.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	12897460	12897855	.	+	.	ID=FBgn0034335.mrna2;geneID=FBgn0034335.path2;Name=FBgn0034335;Dir=indeterminatecoverage=100.0;identity=99.0;matches=392;mismatches=4;indels=0;unknowns=0;Target=FBgn0034335 396 1 .;locus=RLOC_00014882
Chr2	stalkie_big_nohaplotig	exon	12897460	12897855	98	+	.	Parent=FBgn0034335.mrna2
Chr2	stalkie_big_nohaplotig	CDS	12897460	12897855	.	+	0	Parent=FBgn0034335.mrna2
Chr2	gffcl	locus	12905907	12906599	.	+	.	ID=RLOC_00014883;geneIDs=FBgn0063493.1.path1;transcripts=FBgn0063493.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12905907	12906599	.	+	.	ID=FBgn0063493.1.mrna1;geneID=FBgn0063493.1.path1;Name=FBgn0063493.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=693;mismatches=0;indels=0;unknowns=0;Target=FBgn0063493.1 693 1 .;locus=RLOC_00014883
Chr2	stalkie_big_nohaplotig	exon	12905907	12906599	100	+	.	Parent=FBgn0063493.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12905907	12906599	.	+	0	Parent=FBgn0063493.1.mrna1
Chr2	gffcl	locus	12913933	12914664	.	+	.	ID=RLOC_00014884;geneIDs=FBgn0063496.1.path1;transcripts=FBgn0063496.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12913933	12914664	.	+	.	ID=FBgn0063496.1.mrna1;geneID=FBgn0063496.1.path1;Name=FBgn0063496.1;Dir=indeterminatecoverage=98.8;identity=98.1;matches=718;mismatches=14;indels=0;unknowns=0;Target=FBgn0063496.1 741 10 .;locus=RLOC_00014884
Chr2	stalkie_big_nohaplotig	exon	12913933	12914664	98	+	.	Parent=FBgn0063496.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12913933	12914664	.	+	0	Parent=FBgn0063496.1.mrna1
Chr2	gffcl	locus	12919580	12919811	.	-	.	ID=RLOC_00014885;geneIDs=comp169988_c0_seq1.path1;transcripts=comp169988_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12919580	12919811	.	-	.	ID=comp169988_c0_seq1.mrna1;geneID=comp169988_c0_seq1.path1;Name=comp169988_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=232;mismatches=0;indels=0;unknowns=0;Target=comp169988_c0_seq1 232 1 .;CDS_Target=comp169988_c0_seq1 152 3 .;locus=RLOC_00014885
Chr2	stalkie_big_nohaplotig	exon	12919580	12919811	100	-	.	Parent=comp169988_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12919660	12919809	.	-	0	Parent=comp169988_c0_seq1.mrna1
Chr2	gffcl	locus	12920183	12920857	.	+	.	ID=RLOC_00014886;geneIDs=FBgn0063491.1.path1,FBgn0063491.2.path1;transcripts=FBgn0063491.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12920183	12920857	.	+	.	ID=FBgn0063491.1.mrna1;geneID=FBgn0063491.1.path1;Name=FBgn0063491.1;Dir=indeterminatecoverage=96.3;identity=82.8;matches=559;mismatches=111;indels=5;unknowns=0;Target=FBgn0063491.1 696 27 .;CDS_Target=FBgn0063491.1 696 43 .;locus=RLOC_00014886
Chr2	stalkie_big_nohaplotig	exon	12920183	12920857	82	+	.	Parent=FBgn0063491.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12920204	12920857	.	+	0	Parent=FBgn0063491.1.mrna1
Chr2	gffcl	locus	12922030	12922979	.	-	.	ID=RLOC_00014887;geneIDs=FBgn0013983.1.path1;transcripts=FBgn0013983.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12922030	12922979	.	-	.	ID=FBgn0013983.1.mrna1;geneID=FBgn0013983.1.path1;Name=FBgn0013983.1;Dir=sensecoverage=100.0;identity=100.0;matches=882;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014887
Chr2	stalkie_big_nohaplotig	exon	12922030	12922188	100	-	.	Parent=FBgn0013983.1.mrna1;Target=FBgn0013983.1 724 882 +
Chr2	stalkie_big_nohaplotig	exon	12922257	12922979	100	-	.	Parent=FBgn0013983.1.mrna1;Target=FBgn0013983.1 1 723 +
Chr2	stalkie_big_nohaplotig	CDS	12922030	12922188	.	-	0	Parent=FBgn0013983.1.mrna1;Target=FBgn0013983.1 724 882 +
Chr2	stalkie_big_nohaplotig	CDS	12922257	12922979	.	-	0	Parent=FBgn0013983.1.mrna1;Target=FBgn0013983.1 1 723 +
Chr2	gffcl	locus	12924788	12926424	.	+	.	ID=RLOC_00014888;geneIDs=FBgn0001291.1.path1;transcripts=FBgn0001291.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12924788	12926424	.	+	.	ID=FBgn0001291.1.mrna1;geneID=FBgn0001291.1.path1;Name=FBgn0001291.1;Dir=sensecoverage=100.0;identity=100.0;matches=945;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014888
Chr2	stalkie_big_nohaplotig	exon	12924788	12925207	100	+	.	Parent=FBgn0001291.1.mrna1;Target=FBgn0001291.1 1 420 +
Chr2	stalkie_big_nohaplotig	exon	12925265	12925448	100	+	.	Parent=FBgn0001291.1.mrna1;Target=FBgn0001291.1 421 604 +
Chr2	stalkie_big_nohaplotig	exon	12926084	12926424	100	+	.	Parent=FBgn0001291.1.mrna1;Target=FBgn0001291.1 605 945 +
Chr2	stalkie_big_nohaplotig	CDS	12924788	12925207	.	+	0	Parent=FBgn0001291.1.mrna1;Target=FBgn0001291.1 1 420 +
Chr2	stalkie_big_nohaplotig	CDS	12925265	12925448	.	+	0	Parent=FBgn0001291.1.mrna1;Target=FBgn0001291.1 421 604 +
Chr2	stalkie_big_nohaplotig	CDS	12926084	12926424	.	+	2	Parent=FBgn0001291.1.mrna1;Target=FBgn0001291.1 605 945 +
Chr2	gffcl	locus	12928025	12984496	.	.	.	ID=RLOC_00014889;geneIDs=comp147702_c0_seq1.path1,comp156109_c0_seq1.path1;transcripts=comp147702_c0_seq1.mrna1,comp156109_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12928025	12984496	.	+	.	ID=comp147702_c0_seq1.mrna1;geneID=comp147702_c0_seq1.path1;Name=comp147702_c0_seq1;Dir=indeterminatecoverage=75.7;identity=90.0;matches=624;mismatches=33;indels=36;unknowns=0;locus=RLOC_00014889
Chr2	stalkie_big_nohaplotig	exon	12928025	12928032	100	+	.	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 236 229 .
Chr2	stalkie_big_nohaplotig	exon	12928668	12928671	100	+	.	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 240 237 .
Chr2	stalkie_big_nohaplotig	exon	12928919	12928921	100	+	.	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 243 241 .
Chr2	stalkie_big_nohaplotig	exon	12929223	12929230	100	+	.	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 251 244 .
Chr2	stalkie_big_nohaplotig	exon	12931724	12931732	100	+	.	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 260 252 .
Chr2	stalkie_big_nohaplotig	exon	12943793	12943794	100	+	.	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 280 279 .
Chr2	stalkie_big_nohaplotig	exon	12950528	12950537	100	+	.	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 290 281 .
Chr2	stalkie_big_nohaplotig	exon	12952026	12952035	100	+	.	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 300 291 .
Chr2	stalkie_big_nohaplotig	exon	12953088	12953090	100	+	.	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 303 301 .
Chr2	stalkie_big_nohaplotig	exon	12955992	12955993	100	+	.	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 305 304 .
Chr2	stalkie_big_nohaplotig	exon	12963928	12963929	100	+	.	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 307 306 .
Chr2	stalkie_big_nohaplotig	exon	12965126	12965195	60	+	.	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 370 308 .
Chr2	stalkie_big_nohaplotig	exon	12968443	12968451	100	+	.	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 379 371 .
Chr2	stalkie_big_nohaplotig	exon	12970616	12970633	77	+	.	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 397 380 .
Chr2	stalkie_big_nohaplotig	exon	12972824	12972831	100	+	.	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 405 398 .
Chr2	stalkie_big_nohaplotig	exon	12977559	12977576	36	+	.	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 459 422 .
Chr2	stalkie_big_nohaplotig	exon	12982413	12982418	100	+	.	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 465 460 .
Chr2	stalkie_big_nohaplotig	exon	12984017	12984496	97	+	.	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 940 466 .
Chr2	stalkie_big_nohaplotig	CDS	12968446	12968451	.	+	0	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 379 374 .
Chr2	stalkie_big_nohaplotig	CDS	12970616	12970633	.	+	0	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 397 380 .
Chr2	stalkie_big_nohaplotig	CDS	12972824	12972831	.	+	0	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 405 398 .
Chr2	stalkie_big_nohaplotig	CDS	12977559	12977576	.	+	1	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 459 422 .
Chr2	stalkie_big_nohaplotig	CDS	12982413	12982418	.	+	1	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 465 460 .
Chr2	stalkie_big_nohaplotig	CDS	12984017	12984160	.	+	1	Parent=comp147702_c0_seq1.mrna1;Target=comp147702_c0_seq1 607 466 .
Chr2	stalkie_big_nohaplotig	mRNA	12928362	12930543	.	-	.	ID=comp156109_c0_seq1.mrna1;geneID=comp156109_c0_seq1.path1;Name=comp156109_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2180;mismatches=2;indels=0;unknowns=0;Target=comp156109_c0_seq1 2182 1 .;CDS_Target=comp156109_c0_seq1 1439 1221 .;locus=RLOC_00014889
Chr2	stalkie_big_nohaplotig	exon	12928362	12930543	99	-	.	Parent=comp156109_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12929105	12929323	.	-	0	Parent=comp156109_c0_seq1.mrna1
Chr2	gffcl	locus	12930970	12941108	.	-	.	ID=RLOC_00014890;geneIDs=FBgn0003520.1.path1;transcripts=FBgn0003520.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12930970	12941108	.	-	.	ID=FBgn0003520.1.mrna1;geneID=FBgn0003520.1.path1;Name=FBgn0003520.1;Dir=sensecoverage=100.0;identity=99.0;matches=3279;mismatches=3;indels=30;unknowns=0;locus=RLOC_00014890
Chr2	stalkie_big_nohaplotig	exon	12930970	12931149	100	-	.	Parent=FBgn0003520.1.mrna1;Target=FBgn0003520.1 3103 3282 +
Chr2	stalkie_big_nohaplotig	exon	12931223	12931467	100	-	.	Parent=FBgn0003520.1.mrna1;Target=FBgn0003520.1 2858 3102 +
Chr2	stalkie_big_nohaplotig	exon	12931619	12931885	87	-	.	Parent=FBgn0003520.1.mrna1;Target=FBgn0003520.1 2621 2857 +
Chr2	stalkie_big_nohaplotig	exon	12931953	12933246	100	-	.	Parent=FBgn0003520.1.mrna1;Target=FBgn0003520.1 1327 2620 +
Chr2	stalkie_big_nohaplotig	exon	12933302	12933522	100	-	.	Parent=FBgn0003520.1.mrna1;Target=FBgn0003520.1 1106 1326 +
Chr2	stalkie_big_nohaplotig	exon	12933582	12934321	100	-	.	Parent=FBgn0003520.1.mrna1;Target=FBgn0003520.1 366 1105 +
Chr2	stalkie_big_nohaplotig	exon	12940744	12941108	100	-	.	Parent=FBgn0003520.1.mrna1;Target=FBgn0003520.1 1 365 +
Chr2	stalkie_big_nohaplotig	CDS	12930970	12931149	.	-	0	Parent=FBgn0003520.1.mrna1;Target=FBgn0003520.1 3103 3282 +
Chr2	stalkie_big_nohaplotig	CDS	12931223	12931467	.	-	2	Parent=FBgn0003520.1.mrna1;Target=FBgn0003520.1 2858 3102 +
Chr2	stalkie_big_nohaplotig	CDS	12931619	12931885	.	-	2	Parent=FBgn0003520.1.mrna1;Target=FBgn0003520.1 2621 2857 +
Chr2	stalkie_big_nohaplotig	CDS	12931953	12933246	.	-	0	Parent=FBgn0003520.1.mrna1;Target=FBgn0003520.1 1327 2620 +
Chr2	stalkie_big_nohaplotig	CDS	12933302	12933522	.	-	2	Parent=FBgn0003520.1.mrna1;Target=FBgn0003520.1 1106 1326 +
Chr2	stalkie_big_nohaplotig	CDS	12933582	12934321	.	-	1	Parent=FBgn0003520.1.mrna1;Target=FBgn0003520.1 366 1105 +
Chr2	stalkie_big_nohaplotig	CDS	12940744	12941108	.	-	0	Parent=FBgn0003520.1.mrna1;Target=FBgn0003520.1 1 365 +
Chr2	gffcl	locus	12985737	12990987	.	-	.	ID=RLOC_00014891;geneIDs=FBgn0034300.1.path1;transcripts=FBgn0034300.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12985737	12990987	.	-	.	ID=FBgn0034300.1.mrna1;geneID=FBgn0034300.1.path1;Name=FBgn0034300.1;Dir=sensecoverage=100.0;identity=99.6;matches=3986;mismatches=16;indels=0;unknowns=0;locus=RLOC_00014891
Chr2	stalkie_big_nohaplotig	exon	12985737	12986165	99	-	.	Parent=FBgn0034300.1.mrna1;Target=FBgn0034300.1 3574 4002 +
Chr2	stalkie_big_nohaplotig	exon	12986232	12987413	99	-	.	Parent=FBgn0034300.1.mrna1;Target=FBgn0034300.1 2392 3573 +
Chr2	stalkie_big_nohaplotig	exon	12987521	12988250	99	-	.	Parent=FBgn0034300.1.mrna1;Target=FBgn0034300.1 1662 2391 +
Chr2	stalkie_big_nohaplotig	exon	12988313	12989120	99	-	.	Parent=FBgn0034300.1.mrna1;Target=FBgn0034300.1 854 1661 +
Chr2	stalkie_big_nohaplotig	exon	12989173	12989287	100	-	.	Parent=FBgn0034300.1.mrna1;Target=FBgn0034300.1 739 853 +
Chr2	stalkie_big_nohaplotig	exon	12989427	12989811	100	-	.	Parent=FBgn0034300.1.mrna1;Target=FBgn0034300.1 354 738 +
Chr2	stalkie_big_nohaplotig	exon	12989872	12990128	100	-	.	Parent=FBgn0034300.1.mrna1;Target=FBgn0034300.1 97 353 +
Chr2	stalkie_big_nohaplotig	exon	12990892	12990987	98	-	.	Parent=FBgn0034300.1.mrna1;Target=FBgn0034300.1 1 96 +
Chr2	stalkie_big_nohaplotig	CDS	12985737	12986165	.	-	0	Parent=FBgn0034300.1.mrna1;Target=FBgn0034300.1 3574 4002 +
Chr2	stalkie_big_nohaplotig	CDS	12986232	12987413	.	-	0	Parent=FBgn0034300.1.mrna1;Target=FBgn0034300.1 2392 3573 +
Chr2	stalkie_big_nohaplotig	CDS	12987521	12988250	.	-	1	Parent=FBgn0034300.1.mrna1;Target=FBgn0034300.1 1662 2391 +
Chr2	stalkie_big_nohaplotig	CDS	12988313	12989120	.	-	2	Parent=FBgn0034300.1.mrna1;Target=FBgn0034300.1 854 1661 +
Chr2	stalkie_big_nohaplotig	CDS	12989173	12989287	.	-	0	Parent=FBgn0034300.1.mrna1;Target=FBgn0034300.1 739 853 +
Chr2	stalkie_big_nohaplotig	CDS	12989427	12989811	.	-	1	Parent=FBgn0034300.1.mrna1;Target=FBgn0034300.1 354 738 +
Chr2	stalkie_big_nohaplotig	CDS	12989872	12990128	.	-	0	Parent=FBgn0034300.1.mrna1;Target=FBgn0034300.1 97 353 +
Chr2	stalkie_big_nohaplotig	CDS	12990892	12990987	.	-	0	Parent=FBgn0034300.1.mrna1;Target=FBgn0034300.1 1 96 +
Chr2	gffcl	locus	12991270	12993090	.	-	.	ID=RLOC_00014892;geneIDs=comp62925_c0_seq1.path1;transcripts=comp62925_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12991270	12993090	.	-	.	ID=comp62925_c0_seq1.mrna1;geneID=comp62925_c0_seq1.path1;Name=comp62925_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=611;mismatches=0;indels=1;unknowns=0;Target=comp62925_c0_seq1 563 610 .;locus=RLOC_00014892
Chr2	stalkie_big_nohaplotig	exon	12991270	12991293	100	-	.	Parent=comp62925_c0_seq1.mrna1;Target=comp62925_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	exon	12992504	12993090	99	-	.	Parent=comp62925_c0_seq1.mrna1;Target=comp62925_c0_seq1 25 612 -
Chr2	stalkie_big_nohaplotig	CDS	12993041	12993088	.	-	0	Parent=comp62925_c0_seq1.mrna1
Chr2	gffcl	locus	12994441	12995300	.	+	.	ID=RLOC_00014893;geneIDs=FBgn0034299.1.path1;transcripts=FBgn0034299.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12994441	12995300	.	+	.	ID=FBgn0034299.1.mrna1;geneID=FBgn0034299.1.path1;Name=FBgn0034299.1;Dir=sensecoverage=100.0;identity=100.0;matches=633;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014893
Chr2	stalkie_big_nohaplotig	exon	12994441	12994522	100	+	.	Parent=FBgn0034299.1.mrna1;Target=FBgn0034299.1 1 82 +
Chr2	stalkie_big_nohaplotig	exon	12994631	12994879	100	+	.	Parent=FBgn0034299.1.mrna1;Target=FBgn0034299.1 83 331 +
Chr2	stalkie_big_nohaplotig	exon	12994943	12995060	100	+	.	Parent=FBgn0034299.1.mrna1;Target=FBgn0034299.1 332 449 +
Chr2	stalkie_big_nohaplotig	exon	12995117	12995300	100	+	.	Parent=FBgn0034299.1.mrna1;Target=FBgn0034299.1 450 633 +
Chr2	stalkie_big_nohaplotig	CDS	12994441	12994522	.	+	0	Parent=FBgn0034299.1.mrna1;Target=FBgn0034299.1 1 82 +
Chr2	stalkie_big_nohaplotig	CDS	12994631	12994879	.	+	2	Parent=FBgn0034299.1.mrna1;Target=FBgn0034299.1 83 331 +
Chr2	stalkie_big_nohaplotig	CDS	12994943	12995060	.	+	2	Parent=FBgn0034299.1.mrna1;Target=FBgn0034299.1 332 449 +
Chr2	stalkie_big_nohaplotig	CDS	12995117	12995300	.	+	1	Parent=FBgn0034299.1.mrna1;Target=FBgn0034299.1 450 633 +
Chr2	gffcl	locus	12995452	12996617	.	+	.	ID=RLOC_00014894;geneIDs=comp136677_c0_seq1.path1,comp139998_c0_seq1.path1;transcripts=comp136677_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	12995452	12996337	.	+	.	ID=comp136677_c0_seq1.mrna1;geneID=comp136677_c0_seq1.path1;Name=comp136677_c0_seq1;Dir=indeterminatecoverage=95.7;identity=99.5;matches=882;mismatches=4;indels=0;unknowns=0;Target=comp136677_c0_seq1 886 1 .;CDS_Target=comp136677_c0_seq1 99 1 .;locus=RLOC_00014894
Chr2	stalkie_big_nohaplotig	exon	12995452	12996337	99	+	.	Parent=comp136677_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	12995452	12995550	.	+	0	Parent=comp136677_c0_seq1.mrna1
Chr2	gffcl	locus	13001127	13001970	.	+	.	ID=RLOC_00014895;geneIDs=FBgn0034294.path1;transcripts=FBgn0034294.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13001127	13001970	.	+	.	ID=FBgn0034294.mrna1;geneID=FBgn0034294.path1;Name=FBgn0034294;Dir=sensecoverage=100.0;identity=98.3;matches=773;mismatches=13;indels=0;unknowns=0;locus=RLOC_00014895
Chr2	stalkie_big_nohaplotig	exon	13001127	13001594	97	+	.	Parent=FBgn0034294.mrna1;Target=FBgn0034294 1 468 +
Chr2	stalkie_big_nohaplotig	exon	13001653	13001970	100	+	.	Parent=FBgn0034294.mrna1;Target=FBgn0034294 469 786 +
Chr2	stalkie_big_nohaplotig	CDS	13001127	13001594	.	+	0	Parent=FBgn0034294.mrna1;Target=FBgn0034294 1 468 +
Chr2	stalkie_big_nohaplotig	CDS	13001653	13001970	.	+	0	Parent=FBgn0034294.mrna1;Target=FBgn0034294 469 786 +
Chr2	gffcl	locus	13004827	13006182	.	+	.	ID=RLOC_00014896;geneIDs=ORF1043.path1;transcripts=ORF1043.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13004827	13006182	.	+	.	ID=ORF1043.mrna1;geneID=ORF1043.path1;Name=ORF1043;Dir=sensecoverage=100.0;identity=97.9;matches=1266;mismatches=0;indels=27;unknowns=0;locus=RLOC_00014896
Chr2	stalkie_big_nohaplotig	exon	13004827	13005370	100	+	.	Parent=ORF1043.mrna1;Target=ORF1043 1 544 +
Chr2	stalkie_big_nohaplotig	exon	13005434	13006182	96	+	.	Parent=ORF1043.mrna1;Target=ORF1043 545 1266 +
Chr2	stalkie_big_nohaplotig	CDS	13004827	13005370	.	+	0	Parent=ORF1043.mrna1;Target=ORF1043 1 544 +
Chr2	stalkie_big_nohaplotig	CDS	13005434	13006182	.	+	2	Parent=ORF1043.mrna1;Target=ORF1043 545 1266 +
Chr2	gffcl	locus	13012707	13013705	.	-	.	ID=RLOC_00014897;geneIDs=comp152126_c0_seq1.path1;transcripts=comp152126_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13012707	13013705	.	-	.	ID=comp152126_c0_seq1.mrna1;geneID=comp152126_c0_seq1.path1;Name=comp152126_c0_seq1;Dir=sensecoverage=99.9;identity=99.8;matches=931;mismatches=2;indels=0;unknowns=0;Target=comp152126_c0_seq1 540 689 +;locus=RLOC_00014897
Chr2	stalkie_big_nohaplotig	exon	13012707	13012729	100	-	.	Parent=comp152126_c0_seq1.mrna1;Target=comp152126_c0_seq1 912 934 +
Chr2	stalkie_big_nohaplotig	exon	13012796	13013705	99	-	.	Parent=comp152126_c0_seq1.mrna1;Target=comp152126_c0_seq1 2 911 +
Chr2	stalkie_big_nohaplotig	CDS	13013018	13013167	.	-	0	Parent=comp152126_c0_seq1.mrna1
Chr2	gffcl	locus	13021771	13435402	.	+	.	ID=RLOC_00014898;geneIDs=comp150146_c2_seq1.path1,comp161055_c0_seq1.path1;transcripts=comp161055_c0_seq1.mrna1,comp150146_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13021771	13435402	.	+	.	ID=comp161055_c0_seq1.mrna1;geneID=comp161055_c0_seq1.path1;Name=comp161055_c0_seq1;Dir=antisensecoverage=98.9;identity=99.9;matches=5936;mismatches=7;indels=0;unknowns=0;Target=comp161055_c0_seq1 1799 6010 .;locus=RLOC_00014898
Chr2	stalkie_big_nohaplotig	exon	13021771	13026054	99	+	.	Parent=comp161055_c0_seq1.mrna1;Target=comp161055_c0_seq1 1727 6010 -
Chr2	stalkie_big_nohaplotig	exon	13032903	13033312	100	+	.	Parent=comp161055_c0_seq1.mrna1;Target=comp161055_c0_seq1 1317 1726 -
Chr2	stalkie_big_nohaplotig	exon	13033377	13033581	100	+	.	Parent=comp161055_c0_seq1.mrna1;Target=comp161055_c0_seq1 1112 1316 -
Chr2	stalkie_big_nohaplotig	exon	13434293	13434625	99	+	.	Parent=comp161055_c0_seq1.mrna1;Target=comp161055_c0_seq1 779 1111 -
Chr2	stalkie_big_nohaplotig	exon	13434692	13435402	99	+	.	Parent=comp161055_c0_seq1.mrna1;Target=comp161055_c0_seq1 68 778 -
Chr2	stalkie_big_nohaplotig	CDS	13021771	13025982	.	+	0	Parent=comp161055_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13026031	13028100	.	+	.	ID=comp150146_c2_seq1.mrna1;geneID=comp150146_c2_seq1.path1;Name=comp150146_c2_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=1993;mismatches=8;indels=2;unknowns=0;locus=RLOC_00014898
Chr2	stalkie_big_nohaplotig	exon	13026031	13027367	99	+	.	Parent=comp150146_c2_seq1.mrna1;Target=comp150146_c2_seq1 1 1337 +
Chr2	stalkie_big_nohaplotig	exon	13027437	13028100	98	+	.	Parent=comp150146_c2_seq1.mrna1;Target=comp150146_c2_seq1 1338 2003 +
Chr2	stalkie_big_nohaplotig	CDS	13027044	13027367	.	+	0	Parent=comp150146_c2_seq1.mrna1;Target=comp150146_c2_seq1 1014 1337 +
Chr2	stalkie_big_nohaplotig	CDS	13027437	13027622	.	+	0	Parent=comp150146_c2_seq1.mrna1;Target=comp150146_c2_seq1 1338 1523 +
Chr2	gffcl	locus	13039018	13039724	.	+	.	ID=RLOC_00014899;geneIDs=FBgn0034292.1.path1;transcripts=FBgn0034292.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13039018	13039724	.	+	.	ID=FBgn0034292.1.mrna1;geneID=FBgn0034292.1.path1;Name=FBgn0034292.1;Dir=sensecoverage=87.7;identity=100.0;matches=558;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014899
Chr2	stalkie_big_nohaplotig	exon	13039018	13039086	100	+	.	Parent=FBgn0034292.1.mrna1;Target=FBgn0034292.1 1 69 +
Chr2	stalkie_big_nohaplotig	exon	13039170	13039502	100	+	.	Parent=FBgn0034292.1.mrna1;Target=FBgn0034292.1 70 402 +
Chr2	stalkie_big_nohaplotig	exon	13039569	13039724	100	+	.	Parent=FBgn0034292.1.mrna1;Target=FBgn0034292.1 403 558 +
Chr2	stalkie_big_nohaplotig	CDS	13039018	13039086	.	+	0	Parent=FBgn0034292.1.mrna1;Target=FBgn0034292.1 1 69 +
Chr2	stalkie_big_nohaplotig	CDS	13039170	13039502	.	+	0	Parent=FBgn0034292.1.mrna1;Target=FBgn0034292.1 70 402 +
Chr2	stalkie_big_nohaplotig	CDS	13039569	13039724	.	+	0	Parent=FBgn0034292.1.mrna1;Target=FBgn0034292.1 403 558 +
Chr2	gffcl	locus	13148501	13149695	.	-	.	ID=RLOC_00014900;geneIDs=comp152071_c0_seq1.path1;transcripts=comp152071_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13148501	13149695	.	-	.	ID=comp152071_c0_seq1.mrna1;geneID=comp152071_c0_seq1.path1;Name=comp152071_c0_seq1;Dir=indeterminatecoverage=99.5;identity=97.1;matches=1182;mismatches=13;indels=22;unknowns=0;Target=comp152071_c0_seq1 1223 7 .;CDS_Target=comp152071_c0_seq1 1056 898 .;locus=RLOC_00014900
Chr2	stalkie_big_nohaplotig	exon	13148501	13149695	97	-	.	Parent=comp152071_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	13148668	13148826	.	-	0	Parent=comp152071_c0_seq1.mrna1
Chr2	gffcl	locus	13156840	13280865	.	-	.	ID=RLOC_00014901;geneIDs=comp134845_c0_seq1.path1;transcripts=comp134845_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13156840	13280865	.	-	.	ID=comp134845_c0_seq1.mrna1;geneID=comp134845_c0_seq1.path1;Name=comp134845_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=1960;mismatches=4;indels=1;unknowns=0;locus=RLOC_00014901
Chr2	stalkie_big_nohaplotig	exon	13156840	13157363	100	-	.	Parent=comp134845_c0_seq1.mrna1;Target=comp134845_c0_seq1 1442 1965 +
Chr2	stalkie_big_nohaplotig	exon	13159329	13159442	100	-	.	Parent=comp134845_c0_seq1.mrna1;Target=comp134845_c0_seq1 1328 1441 +
Chr2	stalkie_big_nohaplotig	exon	13161752	13161928	100	-	.	Parent=comp134845_c0_seq1.mrna1;Target=comp134845_c0_seq1 1151 1327 +
Chr2	stalkie_big_nohaplotig	exon	13168894	13169002	100	-	.	Parent=comp134845_c0_seq1.mrna1;Target=comp134845_c0_seq1 1042 1150 +
Chr2	stalkie_big_nohaplotig	exon	13175554	13175655	100	-	.	Parent=comp134845_c0_seq1.mrna1;Target=comp134845_c0_seq1 940 1041 +
Chr2	stalkie_big_nohaplotig	exon	13196272	13196792	99	-	.	Parent=comp134845_c0_seq1.mrna1;Target=comp134845_c0_seq1 419 939 +
Chr2	stalkie_big_nohaplotig	exon	13280449	13280865	99	-	.	Parent=comp134845_c0_seq1.mrna1;Target=comp134845_c0_seq1 1 418 +
Chr2	stalkie_big_nohaplotig	CDS	13157224	13157363	.	-	2	Parent=comp134845_c0_seq1.mrna1;Target=comp134845_c0_seq1 1442 1581 +
Chr2	stalkie_big_nohaplotig	CDS	13159329	13159442	.	-	2	Parent=comp134845_c0_seq1.mrna1;Target=comp134845_c0_seq1 1328 1441 +
Chr2	stalkie_big_nohaplotig	CDS	13161752	13161928	.	-	2	Parent=comp134845_c0_seq1.mrna1;Target=comp134845_c0_seq1 1151 1327 +
Chr2	stalkie_big_nohaplotig	CDS	13168894	13169002	.	-	0	Parent=comp134845_c0_seq1.mrna1;Target=comp134845_c0_seq1 1042 1150 +
Chr2	stalkie_big_nohaplotig	CDS	13175554	13175655	.	-	0	Parent=comp134845_c0_seq1.mrna1;Target=comp134845_c0_seq1 940 1041 +
Chr2	stalkie_big_nohaplotig	CDS	13196272	13196792	.	-	2	Parent=comp134845_c0_seq1.mrna1;Target=comp134845_c0_seq1 419 939 +
Chr2	stalkie_big_nohaplotig	CDS	13280449	13280554	.	-	0	Parent=comp134845_c0_seq1.mrna1;Target=comp134845_c0_seq1 313 418 +
Chr2	gffcl	locus	13215646	13217888	.	-	.	ID=RLOC_00014902;geneIDs=comp130581_c0_seq1.path1;transcripts=comp130581_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13215646	13217888	.	-	.	ID=comp130581_c0_seq1.mrna1;geneID=comp130581_c0_seq1.path1;Name=comp130581_c0_seq1;Dir=antisensecoverage=92.2;identity=98.5;matches=943;mismatches=14;indels=0;unknowns=0;locus=RLOC_00014902
Chr2	stalkie_big_nohaplotig	exon	13215646	13216463	100	-	.	Parent=comp130581_c0_seq1.mrna1;Target=comp130581_c0_seq1 2 819 -
Chr2	stalkie_big_nohaplotig	exon	13217750	13217888	89	-	.	Parent=comp130581_c0_seq1.mrna1;Target=comp130581_c0_seq1 820 958 -
Chr2	stalkie_big_nohaplotig	CDS	13216318	13216463	.	-	2	Parent=comp130581_c0_seq1.mrna1;Target=comp130581_c0_seq1 674 819 .
Chr2	stalkie_big_nohaplotig	CDS	13217750	13217753	.	-	0	Parent=comp130581_c0_seq1.mrna1;Target=comp130581_c0_seq1 820 823 .
Chr2	gffcl	locus	13221418	13222144	.	+	.	ID=RLOC_00014903;geneIDs=comp135547_c0_seq1.path1;transcripts=comp135547_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13221418	13222144	.	+	.	ID=comp135547_c0_seq1.mrna1;geneID=comp135547_c0_seq1.path1;Name=comp135547_c0_seq1;Dir=sensecoverage=98.8;identity=99.8;matches=640;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014903
Chr2	stalkie_big_nohaplotig	exon	13221418	13221693	99	+	.	Parent=comp135547_c0_seq1.mrna1;Target=comp135547_c0_seq1 1 276 +
Chr2	stalkie_big_nohaplotig	exon	13221780	13222144	100	+	.	Parent=comp135547_c0_seq1.mrna1;Target=comp135547_c0_seq1 277 641 +
Chr2	stalkie_big_nohaplotig	CDS	13221660	13221693	.	+	0	Parent=comp135547_c0_seq1.mrna1;Target=comp135547_c0_seq1 243 276 +
Chr2	stalkie_big_nohaplotig	CDS	13221780	13222030	.	+	2	Parent=comp135547_c0_seq1.mrna1;Target=comp135547_c0_seq1 277 527 +
Chr2	gffcl	locus	13290364	13291664	.	-	.	ID=RLOC_00014904;geneIDs=comp142904_c0_seq1.path1;transcripts=comp142904_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13290364	13291664	.	-	.	ID=comp142904_c0_seq1.mrna1;geneID=comp142904_c0_seq1.path1;Name=comp142904_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1301;mismatches=0;indels=0;unknowns=0;Target=comp142904_c0_seq1 1301 1 .;CDS_Target=comp142904_c0_seq1 525 355 .;locus=RLOC_00014904
Chr2	stalkie_big_nohaplotig	exon	13290364	13291664	100	-	.	Parent=comp142904_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	13291140	13291310	.	-	0	Parent=comp142904_c0_seq1.mrna1
Chr2	gffcl	locus	13326523	13327064	.	+	.	ID=RLOC_00014905;geneIDs=Dv_FBgn0206941.4.path1;transcripts=Dv_FBgn0206941.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13326523	13327064	.	+	.	ID=Dv_FBgn0206941.4.mrna1;geneID=Dv_FBgn0206941.4.path1;Name=Dv_FBgn0206941.4;Dir=indeterminatecoverage=99.4;identity=93.9;matches=448;mismatches=29;indels=0;unknowns=0;locus=RLOC_00014905
Chr2	stalkie_big_nohaplotig	exon	13326523	13326555	96	+	.	Parent=Dv_FBgn0206941.4.mrna1;Target=Dv_FBgn0206941.4 36 4 .
Chr2	stalkie_big_nohaplotig	exon	13326621	13327064	93	+	.	Parent=Dv_FBgn0206941.4.mrna1;Target=Dv_FBgn0206941.4 504 61 .
Chr2	stalkie_big_nohaplotig	CDS	13326523	13326555	.	+	0	Parent=Dv_FBgn0206941.4.mrna1;Target=Dv_FBgn0206941.4 36 4 .
Chr2	stalkie_big_nohaplotig	CDS	13326621	13327064	.	+	0	Parent=Dv_FBgn0206941.4.mrna1;Target=Dv_FBgn0206941.4 504 61 .
Chr2	gffcl	locus	13328756	13329146	.	+	.	ID=RLOC_00014906;geneIDs=Dp_FBgn0245446.path3;transcripts=Dp_FBgn0245446.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	13328756	13329146	.	+	.	ID=Dp_FBgn0245446.mrna3;geneID=Dp_FBgn0245446.path3;Name=Dp_FBgn0245446;Dir=indeterminatecoverage=100.0;identity=85.9;matches=336;mismatches=21;indels=34;unknowns=0;Target=Dp_FBgn0245446 357 1 .;locus=RLOC_00014906
Chr2	stalkie_big_nohaplotig	exon	13328756	13329146	85	+	.	Parent=Dp_FBgn0245446.mrna3
Chr2	stalkie_big_nohaplotig	CDS	13328756	13329146	.	+	0	Parent=Dp_FBgn0245446.mrna3
Chr2	gffcl	locus	13329236	13330214	.	+	.	ID=RLOC_00014907;geneIDs=comp161217_c0_seq1.path1;transcripts=comp161217_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13329236	13330214	.	+	.	ID=comp161217_c0_seq1.mrna1;geneID=comp161217_c0_seq1.path1;Name=comp161217_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.4;matches=774;mismatches=63;indels=1;unknowns=0;Target=comp161217_c0_seq1 365 183 .;locus=RLOC_00014907
Chr2	stalkie_big_nohaplotig	exon	13329236	13329283	97	+	.	Parent=comp161217_c0_seq1.mrna1;Target=comp161217_c0_seq1 48 1 .
Chr2	stalkie_big_nohaplotig	exon	13329399	13329873	92	+	.	Parent=comp161217_c0_seq1.mrna1;Target=comp161217_c0_seq1 522 49 .
Chr2	stalkie_big_nohaplotig	exon	13329900	13330214	91	+	.	Parent=comp161217_c0_seq1.mrna1;Target=comp161217_c0_seq1 850 536 .
Chr2	stalkie_big_nohaplotig	CDS	13329533	13329715	.	+	0	Parent=comp161217_c0_seq1.mrna1
Chr2	gffcl	locus	13416591	13417748	.	+	.	ID=RLOC_00014908;geneIDs=FBgn0034105.1.path1;transcripts=FBgn0034105.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13416591	13417748	.	+	.	ID=FBgn0034105.1.mrna1;geneID=FBgn0034105.1.path1;Name=FBgn0034105.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1154;mismatches=4;indels=0;unknowns=0;Target=FBgn0034105.1 1158 1 .;locus=RLOC_00014908
Chr2	stalkie_big_nohaplotig	exon	13416591	13417748	99	+	.	Parent=FBgn0034105.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	13416591	13417748	.	+	0	Parent=FBgn0034105.1.mrna1
Chr2	gffcl	locus	13486368	13487248	.	-	.	ID=RLOC_00014909;geneIDs=comp58927_c0_seq1.path1;transcripts=comp58927_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13486368	13487248	.	-	.	ID=comp58927_c0_seq1.mrna1;geneID=comp58927_c0_seq1.path1;Name=comp58927_c0_seq1;Dir=sensecoverage=96.6;identity=97.0;matches=737;mismatches=18;indels=5;unknowns=0;locus=RLOC_00014909
Chr2	stalkie_big_nohaplotig	exon	13486368	13486698	95	-	.	Parent=comp58927_c0_seq1.mrna1;Target=comp58927_c0_seq1 448 783 +
Chr2	stalkie_big_nohaplotig	exon	13486766	13487119	98	-	.	Parent=comp58927_c0_seq1.mrna1;Target=comp58927_c0_seq1 94 447 +
Chr2	stalkie_big_nohaplotig	exon	13487179	13487248	98	-	.	Parent=comp58927_c0_seq1.mrna1;Target=comp58927_c0_seq1 24 93 +
Chr2	stalkie_big_nohaplotig	CDS	13486546	13486698	.	-	0	Parent=comp58927_c0_seq1.mrna1;Target=comp58927_c0_seq1 448 600 +
Chr2	stalkie_big_nohaplotig	CDS	13486766	13487119	.	-	0	Parent=comp58927_c0_seq1.mrna1;Target=comp58927_c0_seq1 94 447 +
Chr2	stalkie_big_nohaplotig	CDS	13487179	13487247	.	-	0	Parent=comp58927_c0_seq1.mrna1;Target=comp58927_c0_seq1 25 93 +
Chr2	gffcl	locus	13491865	13492637	.	-	.	ID=RLOC_00014911;geneIDs=comp61825_c0_seq1.path1;transcripts=comp61825_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13491865	13492637	.	-	.	ID=comp61825_c0_seq1.mrna1;geneID=comp61825_c0_seq1.path1;Name=comp61825_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=771;mismatches=2;indels=0;unknowns=0;Target=comp61825_c0_seq1 773 1 .;CDS_Target=comp61825_c0_seq1 241 2 .;locus=RLOC_00014911
Chr2	stalkie_big_nohaplotig	exon	13491865	13492637	99	-	.	Parent=comp61825_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	13492397	13492636	.	-	0	Parent=comp61825_c0_seq1.mrna1
Chr2	gffcl	locus	13494431	13495206	.	-	.	ID=RLOC_00014912;geneIDs=comp168776_c0_seq1.path1;transcripts=comp168776_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13494431	13495206	.	-	.	ID=comp168776_c0_seq1.mrna1;geneID=comp168776_c0_seq1.path1;Name=comp168776_c0_seq1;Dir=antisensecoverage=98.3;identity=100.0;matches=645;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014912
Chr2	stalkie_big_nohaplotig	exon	13494431	13494628	100	-	.	Parent=comp168776_c0_seq1.mrna1;Target=comp168776_c0_seq1 1 198 -
Chr2	stalkie_big_nohaplotig	exon	13494699	13495061	100	-	.	Parent=comp168776_c0_seq1.mrna1;Target=comp168776_c0_seq1 199 561 -
Chr2	stalkie_big_nohaplotig	exon	13495123	13495206	100	-	.	Parent=comp168776_c0_seq1.mrna1;Target=comp168776_c0_seq1 562 645 -
Chr2	stalkie_big_nohaplotig	CDS	13494431	13494628	.	-	0	Parent=comp168776_c0_seq1.mrna1;Target=comp168776_c0_seq1 1 198 .
Chr2	stalkie_big_nohaplotig	CDS	13494699	13495061	.	-	0	Parent=comp168776_c0_seq1.mrna1;Target=comp168776_c0_seq1 199 561 .
Chr2	stalkie_big_nohaplotig	CDS	13495123	13495176	.	-	0	Parent=comp168776_c0_seq1.mrna1;Target=comp168776_c0_seq1 562 615 .
Chr2	gffcl	locus	13501703	13502702	.	-	.	ID=RLOC_00014913;geneIDs=FBgn0034288.1.path1;transcripts=FBgn0034288.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13501703	13502702	.	-	.	ID=FBgn0034288.1.mrna1;geneID=FBgn0034288.1.path1;Name=FBgn0034288.1;Dir=sensecoverage=100.0;identity=100.0;matches=657;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014913
Chr2	stalkie_big_nohaplotig	exon	13501703	13501927	100	-	.	Parent=FBgn0034288.1.mrna1;Target=FBgn0034288.1 433 657 +
Chr2	stalkie_big_nohaplotig	exon	13502023	13502385	100	-	.	Parent=FBgn0034288.1.mrna1;Target=FBgn0034288.1 70 432 +
Chr2	stalkie_big_nohaplotig	exon	13502634	13502702	100	-	.	Parent=FBgn0034288.1.mrna1;Target=FBgn0034288.1 1 69 +
Chr2	stalkie_big_nohaplotig	CDS	13501703	13501927	.	-	0	Parent=FBgn0034288.1.mrna1;Target=FBgn0034288.1 433 657 +
Chr2	stalkie_big_nohaplotig	CDS	13502023	13502385	.	-	0	Parent=FBgn0034288.1.mrna1;Target=FBgn0034288.1 70 432 +
Chr2	stalkie_big_nohaplotig	CDS	13502634	13502702	.	-	0	Parent=FBgn0034288.1.mrna1;Target=FBgn0034288.1 1 69 +
Chr2	gffcl	locus	13512137	13514662	.	+	.	ID=RLOC_00014914;geneIDs=FBgn0003545.1.path1;transcripts=FBgn0003545.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13512137	13514662	.	+	.	ID=FBgn0003545.1.mrna1;geneID=FBgn0003545.1.path1;Name=FBgn0003545.1;Dir=sensecoverage=99.1;identity=99.5;matches=2251;mismatches=12;indels=0;unknowns=0;locus=RLOC_00014914
Chr2	stalkie_big_nohaplotig	exon	13512137	13512693	98	+	.	Parent=FBgn0003545.1.mrna1;Target=FBgn0003545.1 21 577 +
Chr2	stalkie_big_nohaplotig	exon	13512751	13513328	100	+	.	Parent=FBgn0003545.1.mrna1;Target=FBgn0003545.1 578 1155 +
Chr2	stalkie_big_nohaplotig	exon	13513399	13513835	99	+	.	Parent=FBgn0003545.1.mrna1;Target=FBgn0003545.1 1156 1592 +
Chr2	stalkie_big_nohaplotig	exon	13513900	13514101	100	+	.	Parent=FBgn0003545.1.mrna1;Target=FBgn0003545.1 1593 1794 +
Chr2	stalkie_big_nohaplotig	exon	13514174	13514662	99	+	.	Parent=FBgn0003545.1.mrna1;Target=FBgn0003545.1 1795 2283 +
Chr2	stalkie_big_nohaplotig	CDS	13512138	13512693	.	+	0	Parent=FBgn0003545.1.mrna1;Target=FBgn0003545.1 22 577 +
Chr2	stalkie_big_nohaplotig	CDS	13512751	13513328	.	+	2	Parent=FBgn0003545.1.mrna1;Target=FBgn0003545.1 578 1155 +
Chr2	stalkie_big_nohaplotig	CDS	13513399	13513835	.	+	0	Parent=FBgn0003545.1.mrna1;Target=FBgn0003545.1 1156 1592 +
Chr2	stalkie_big_nohaplotig	CDS	13513900	13514101	.	+	1	Parent=FBgn0003545.1.mrna1;Target=FBgn0003545.1 1593 1794 +
Chr2	stalkie_big_nohaplotig	CDS	13514174	13514662	.	+	0	Parent=FBgn0003545.1.mrna1;Target=FBgn0003545.1 1795 2283 +
Chr2	gffcl	locus	13519100	13520958	.	+	.	ID=RLOC_00014915;geneIDs=FBgn0003545.2.path1;transcripts=FBgn0003545.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13519100	13520958	.	+	.	ID=FBgn0003545.2.mrna1;geneID=FBgn0003545.2.path1;Name=FBgn0003545.2;Dir=sensecoverage=100.0;identity=97.7;matches=1612;mismatches=38;indels=0;unknowns=0;locus=RLOC_00014915
Chr2	stalkie_big_nohaplotig	exon	13519100	13519714	95	+	.	Parent=FBgn0003545.2.mrna1;Target=FBgn0003545.2 1 615 +
Chr2	stalkie_big_nohaplotig	exon	13519786	13520231	99	+	.	Parent=FBgn0003545.2.mrna1;Target=FBgn0003545.2 616 1061 +
Chr2	stalkie_big_nohaplotig	exon	13520294	13520495	98	+	.	Parent=FBgn0003545.2.mrna1;Target=FBgn0003545.2 1062 1263 +
Chr2	stalkie_big_nohaplotig	exon	13520572	13520958	99	+	.	Parent=FBgn0003545.2.mrna1;Target=FBgn0003545.2 1264 1650 +
Chr2	stalkie_big_nohaplotig	CDS	13519100	13519714	.	+	0	Parent=FBgn0003545.2.mrna1;Target=FBgn0003545.2 1 615 +
Chr2	stalkie_big_nohaplotig	CDS	13519786	13520231	.	+	0	Parent=FBgn0003545.2.mrna1;Target=FBgn0003545.2 616 1061 +
Chr2	stalkie_big_nohaplotig	CDS	13520294	13520495	.	+	1	Parent=FBgn0003545.2.mrna1;Target=FBgn0003545.2 1062 1263 +
Chr2	stalkie_big_nohaplotig	CDS	13520572	13520958	.	+	0	Parent=FBgn0003545.2.mrna1;Target=FBgn0003545.2 1264 1650 +
Chr2	gffcl	locus	13531551	13533260	.	-	.	ID=RLOC_00014916;geneIDs=comp147096_c0_seq1.path1;transcripts=comp147096_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13531551	13533260	.	-	.	ID=comp147096_c0_seq1.mrna1;geneID=comp147096_c0_seq1.path1;Name=comp147096_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.0;matches=1661;mismatches=47;indels=4;unknowns=0;Target=comp147096_c0_seq1 1710 1 .;CDS_Target=comp147096_c0_seq1 1356 1174 .;locus=RLOC_00014916
Chr2	stalkie_big_nohaplotig	exon	13531551	13533260	97	-	.	Parent=comp147096_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	13531905	13532087	.	-	0	Parent=comp147096_c0_seq1.mrna1
Chr2	gffcl	locus	13585478	13585948	.	+	.	ID=RLOC_00014917;geneIDs=comp149552_c0_seq1.path1;transcripts=comp149552_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13585478	13585948	.	+	.	ID=comp149552_c0_seq1.mrna1;geneID=comp149552_c0_seq1.path1;Name=comp149552_c0_seq1;Dir=indeterminatecoverage=98.5;identity=96.8;matches=458;mismatches=13;indels=2;unknowns=0;Target=comp149552_c0_seq1 479 7 .;CDS_Target=comp149552_c0_seq1 44 9 .;locus=RLOC_00014917
Chr2	stalkie_big_nohaplotig	exon	13585478	13585948	96	+	.	Parent=comp149552_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	13585480	13585513	.	+	0	Parent=comp149552_c0_seq1.mrna1
Chr2	gffcl	locus	13590431	13590762	.	+	.	ID=RLOC_00014918;geneIDs=comp57208_c0_seq1.path1;transcripts=comp57208_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13590431	13590762	.	+	.	ID=comp57208_c0_seq1.mrna1;geneID=comp57208_c0_seq1.path1;Name=comp57208_c0_seq1;Dir=indeterminatecoverage=93.3;identity=99.7;matches=332;mismatches=0;indels=1;unknowns=0;Target=comp57208_c0_seq1 348 16 .;CDS_Target=comp57208_c0_seq1 117 58 .;locus=RLOC_00014918
Chr2	stalkie_big_nohaplotig	exon	13590431	13590762	99	+	.	Parent=comp57208_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	13590473	13590531	.	+	0	Parent=comp57208_c0_seq1.mrna1
Chr2	gffcl	locus	13592004	13592854	.	-	.	ID=RLOC_00014919;geneIDs=comp143379_c0_seq1.path1;transcripts=comp143379_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13592004	13592854	.	-	.	ID=comp143379_c0_seq1.mrna1;geneID=comp143379_c0_seq1.path1;Name=comp143379_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=850;mismatches=1;indels=9;unknowns=0;Target=comp143379_c0_seq1 860 1 .;CDS_Target=comp143379_c0_seq1 604 92 .;locus=RLOC_00014919
Chr2	stalkie_big_nohaplotig	exon	13592004	13592854	98	-	.	Parent=comp143379_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	13592260	13592763	.	-	0	Parent=comp143379_c0_seq1.mrna1
Chr2	gffcl	locus	13596345	13597077	.	-	.	ID=RLOC_00014920;geneIDs=comp134037_c0_seq1.path1,comp148263_c0_seq1.path1;transcripts=comp148263_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13596529	13597077	.	-	.	ID=comp148263_c0_seq1.mrna1;geneID=comp148263_c0_seq1.path1;Name=comp148263_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.8;matches=529;mismatches=11;indels=12;unknowns=0;Target=comp148263_c0_seq1 543 1 .;CDS_Target=comp148263_c0_seq1 543 67 .;locus=RLOC_00014920
Chr2	stalkie_big_nohaplotig	exon	13596529	13597077	95	-	.	Parent=comp148263_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	13596529	13597011	.	-	0	Parent=comp148263_c0_seq1.mrna1
Chr2	gffcl	locus	13599054	13599551	.	-	.	ID=RLOC_00014921;geneIDs=comp59626_c0_seq1.path1;transcripts=comp59626_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13599054	13599551	.	-	.	ID=comp59626_c0_seq1.mrna1;geneID=comp59626_c0_seq1.path1;Name=comp59626_c0_seq1;Dir=indeterminatecoverage=96.7;identity=99.2;matches=494;mismatches=4;indels=0;unknowns=0;Target=comp59626_c0_seq1 498 1 .;CDS_Target=comp59626_c0_seq1 438 1 .;locus=RLOC_00014921
Chr2	stalkie_big_nohaplotig	exon	13599054	13599551	99	-	.	Parent=comp59626_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	13599114	13599551	.	-	0	Parent=comp59626_c0_seq1.mrna1
Chr2	gffcl	locus	13637933	13639189	.	+	.	ID=RLOC_00014922;geneIDs=FBgn0052573.1.path1;transcripts=FBgn0052573.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13637933	13639189	.	+	.	ID=FBgn0052573.1.mrna1;geneID=FBgn0052573.1.path1;Name=FBgn0052573.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1254;mismatches=3;indels=0;unknowns=0;Target=FBgn0052573.1 1257 1 .;locus=RLOC_00014922
Chr2	stalkie_big_nohaplotig	exon	13637933	13639189	99	+	.	Parent=FBgn0052573.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	13637933	13639189	.	+	0	Parent=FBgn0052573.1.mrna1
Chr2	gffcl	locus	13639459	13639732	.	-	.	ID=RLOC_00014923;geneIDs=comp101377_c0_seq1.path1;transcripts=comp101377_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13639459	13639732	.	-	.	ID=comp101377_c0_seq1.mrna1;geneID=comp101377_c0_seq1.path1;Name=comp101377_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.3;matches=272;mismatches=2;indels=0;unknowns=0;Target=comp101377_c0_seq1 275 2 .;CDS_Target=comp101377_c0_seq1 57 4 .;locus=RLOC_00014923
Chr2	stalkie_big_nohaplotig	exon	13639459	13639732	99	-	.	Parent=comp101377_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	13639677	13639730	.	-	0	Parent=comp101377_c0_seq1.mrna1
Chr2	gffcl	locus	13672015	13811864	.	-	.	ID=RLOC_00014924;geneIDs=comp161021_c0_seq1.path2;transcripts=comp161021_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	13672015	13811864	.	-	.	ID=comp161021_c0_seq1.mrna2;geneID=comp161021_c0_seq1.path2;Name=comp161021_c0_seq1;Dir=indeterminatecoverage=82.3;identity=94.3;matches=4839;mismatches=168;indels=125;unknowns=0;locus=RLOC_00014924
Chr2	stalkie_big_nohaplotig	exon	13672015	13672789	97	-	.	Parent=comp161021_c0_seq1.mrna2;Target=comp161021_c0_seq1 5085 4311 .
Chr2	stalkie_big_nohaplotig	exon	13673217	13674428	91	-	.	Parent=comp161021_c0_seq1.mrna2;Target=comp161021_c0_seq1 4310 3082 .
Chr2	stalkie_big_nohaplotig	exon	13802112	13803309	90	-	.	Parent=comp161021_c0_seq1.mrna2;Target=comp161021_c0_seq1 3081 1867 .
Chr2	stalkie_big_nohaplotig	exon	13803737	13804505	97	-	.	Parent=comp161021_c0_seq1.mrna2;Target=comp161021_c0_seq1 1866 1098 .
Chr2	stalkie_big_nohaplotig	exon	13806920	13806922	100	-	.	Parent=comp161021_c0_seq1.mrna2;Target=comp161021_c0_seq1 1097 1095 .
Chr2	stalkie_big_nohaplotig	exon	13808366	13808972	97	-	.	Parent=comp161021_c0_seq1.mrna2;Target=comp161021_c0_seq1 1094 488 .
Chr2	stalkie_big_nohaplotig	exon	13809033	13809186	96	-	.	Parent=comp161021_c0_seq1.mrna2;Target=comp161021_c0_seq1 487 337 .
Chr2	stalkie_big_nohaplotig	exon	13810346	13810418	98	-	.	Parent=comp161021_c0_seq1.mrna2;Target=comp161021_c0_seq1 336 264 .
Chr2	stalkie_big_nohaplotig	exon	13811178	13811392	96	-	.	Parent=comp161021_c0_seq1.mrna2;Target=comp161021_c0_seq1 263 49 .
Chr2	stalkie_big_nohaplotig	exon	13811817	13811864	97	-	.	Parent=comp161021_c0_seq1.mrna2;Target=comp161021_c0_seq1 48 1 .
Chr2	stalkie_big_nohaplotig	CDS	13803143	13803309	.	-	2	Parent=comp161021_c0_seq1.mrna2;Target=comp161021_c0_seq1 2033 1867 .
Chr2	stalkie_big_nohaplotig	CDS	13803737	13804505	.	-	0	Parent=comp161021_c0_seq1.mrna2;Target=comp161021_c0_seq1 1866 1098 .
Chr2	stalkie_big_nohaplotig	CDS	13806920	13806922	.	-	0	Parent=comp161021_c0_seq1.mrna2;Target=comp161021_c0_seq1 1097 1095 .
Chr2	stalkie_big_nohaplotig	CDS	13808366	13808972	.	-	1	Parent=comp161021_c0_seq1.mrna2;Target=comp161021_c0_seq1 1094 488 .
Chr2	stalkie_big_nohaplotig	CDS	13809033	13809186	.	-	2	Parent=comp161021_c0_seq1.mrna2;Target=comp161021_c0_seq1 487 337 .
Chr2	stalkie_big_nohaplotig	CDS	13810346	13810418	.	-	0	Parent=comp161021_c0_seq1.mrna2;Target=comp161021_c0_seq1 336 264 .
Chr2	stalkie_big_nohaplotig	CDS	13811178	13811392	.	-	2	Parent=comp161021_c0_seq1.mrna2;Target=comp161021_c0_seq1 263 49 .
Chr2	stalkie_big_nohaplotig	CDS	13811817	13811862	.	-	0	Parent=comp161021_c0_seq1.mrna2;Target=comp161021_c0_seq1 48 3 .
Chr2	gffcl	locus	13672015	13811864	.	+	.	ID=RLOC_00014925;geneIDs=comp161021_c0_seq1.path1;transcripts=comp161021_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13672015	13811864	.	+	.	ID=comp161021_c0_seq1.mrna1;geneID=comp161021_c0_seq1.path1;Name=comp161021_c0_seq1;Dir=indeterminatecoverage=82.3;identity=94.4;matches=4839;mismatches=172;indels=117;unknowns=0;locus=RLOC_00014925
Chr2	stalkie_big_nohaplotig	exon	13672015	13672785	97	+	.	Parent=comp161021_c0_seq1.mrna1;Target=comp161021_c0_seq1 1866 1096 .
Chr2	stalkie_big_nohaplotig	exon	13673213	13674410	91	+	.	Parent=comp161021_c0_seq1.mrna1;Target=comp161021_c0_seq1 3081 1867 .
Chr2	stalkie_big_nohaplotig	exon	13802094	13803305	90	+	.	Parent=comp161021_c0_seq1.mrna1;Target=comp161021_c0_seq1 4310 3082 .
Chr2	stalkie_big_nohaplotig	exon	13803733	13804508	97	+	.	Parent=comp161021_c0_seq1.mrna1;Target=comp161021_c0_seq1 5086 4311 .
Chr2	stalkie_big_nohaplotig	exon	13808366	13808972	98	+	.	Parent=comp161021_c0_seq1.mrna1;Target=comp161021_c0_seq1 5693 5087 .
Chr2	stalkie_big_nohaplotig	exon	13809033	13809186	96	+	.	Parent=comp161021_c0_seq1.mrna1;Target=comp161021_c0_seq1 5844 5694 .
Chr2	stalkie_big_nohaplotig	exon	13810346	13810413	100	+	.	Parent=comp161021_c0_seq1.mrna1;Target=comp161021_c0_seq1 5912 5845 .
Chr2	stalkie_big_nohaplotig	exon	13811173	13811392	94	+	.	Parent=comp161021_c0_seq1.mrna1;Target=comp161021_c0_seq1 6132 5913 .
Chr2	stalkie_big_nohaplotig	exon	13811817	13811864	97	+	.	Parent=comp161021_c0_seq1.mrna1;Target=comp161021_c0_seq1 6180 6133 .
Chr2	stalkie_big_nohaplotig	CDS	13672017	13672785	.	+	0	Parent=comp161021_c0_seq1.mrna1;Target=comp161021_c0_seq1 1866 1098 .
Chr2	stalkie_big_nohaplotig	CDS	13673213	13673379	.	+	2	Parent=comp161021_c0_seq1.mrna1;Target=comp161021_c0_seq1 2033 1867 .
Chr2	gffcl	locus	13690267	13693251	.	-	.	ID=RLOC_00014926;geneIDs=FBgn0028424.1.path1;transcripts=FBgn0028424.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13690267	13693251	.	-	.	ID=FBgn0028424.1.mrna1;geneID=FBgn0028424.1.path1;Name=FBgn0028424.1;Dir=sensecoverage=100.0;identity=98.7;matches=1321;mismatches=17;indels=0;unknowns=0;locus=RLOC_00014926
Chr2	stalkie_big_nohaplotig	exon	13690267	13690531	97	-	.	Parent=FBgn0028424.1.mrna1;Target=FBgn0028424.1 1074 1338 +
Chr2	stalkie_big_nohaplotig	exon	13690594	13691155	98	-	.	Parent=FBgn0028424.1.mrna1;Target=FBgn0028424.1 512 1073 +
Chr2	stalkie_big_nohaplotig	exon	13691279	13691549	99	-	.	Parent=FBgn0028424.1.mrna1;Target=FBgn0028424.1 241 511 +
Chr2	stalkie_big_nohaplotig	exon	13693012	13693251	98	-	.	Parent=FBgn0028424.1.mrna1;Target=FBgn0028424.1 1 240 +
Chr2	stalkie_big_nohaplotig	CDS	13690267	13690531	.	-	1	Parent=FBgn0028424.1.mrna1;Target=FBgn0028424.1 1074 1338 +
Chr2	stalkie_big_nohaplotig	CDS	13690594	13691155	.	-	2	Parent=FBgn0028424.1.mrna1;Target=FBgn0028424.1 512 1073 +
Chr2	stalkie_big_nohaplotig	CDS	13691279	13691549	.	-	0	Parent=FBgn0028424.1.mrna1;Target=FBgn0028424.1 241 511 +
Chr2	stalkie_big_nohaplotig	CDS	13693012	13693251	.	-	0	Parent=FBgn0028424.1.mrna1;Target=FBgn0028424.1 1 240 +
Chr2	gffcl	locus	13700437	13701126	.	+	.	ID=RLOC_00014927;geneIDs=comp147364_c0_seq1.path1;transcripts=comp147364_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13700437	13701126	.	+	.	ID=comp147364_c0_seq1.mrna1;geneID=comp147364_c0_seq1.path1;Name=comp147364_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.1;matches=684;mismatches=6;indels=0;unknowns=0;Target=comp147364_c0_seq1 690 1 .;CDS_Target=comp147364_c0_seq1 550 284 .;locus=RLOC_00014927
Chr2	stalkie_big_nohaplotig	exon	13700437	13701126	99	+	.	Parent=comp147364_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	13700720	13700986	.	+	0	Parent=comp147364_c0_seq1.mrna1
Chr2	gffcl	locus	13713091	13745291	.	+	.	ID=RLOC_00014928;geneIDs=FBgn0030887.1.path1;transcripts=FBgn0030887.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13713091	13745291	.	+	.	ID=FBgn0030887.1.mrna1;geneID=FBgn0030887.1.path1;Name=FBgn0030887.1;Dir=sensecoverage=100.0;identity=99.1;matches=2404;mismatches=17;indels=6;unknowns=0;locus=RLOC_00014928
Chr2	stalkie_big_nohaplotig	exon	13713091	13713833	98	+	.	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 1 740 +
Chr2	stalkie_big_nohaplotig	exon	13718934	13719085	100	+	.	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 741 892 +
Chr2	stalkie_big_nohaplotig	exon	13726796	13726941	100	+	.	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 893 1038 +
Chr2	stalkie_big_nohaplotig	exon	13727992	13728430	100	+	.	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 1039 1477 +
Chr2	stalkie_big_nohaplotig	exon	13731185	13731322	97	+	.	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 1478 1615 +
Chr2	stalkie_big_nohaplotig	exon	13732028	13732174	100	+	.	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 1616 1762 +
Chr2	stalkie_big_nohaplotig	exon	13732316	13732444	99	+	.	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 1763 1891 +
Chr2	stalkie_big_nohaplotig	exon	13734673	13734746	100	+	.	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 1892 1965 +
Chr2	stalkie_big_nohaplotig	exon	13742633	13742733	99	+	.	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 1966 2066 +
Chr2	stalkie_big_nohaplotig	exon	13742794	13742909	100	+	.	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 2067 2182 +
Chr2	stalkie_big_nohaplotig	exon	13743006	13743114	100	+	.	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 2183 2291 +
Chr2	stalkie_big_nohaplotig	exon	13744837	13744932	96	+	.	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 2292 2384 +
Chr2	stalkie_big_nohaplotig	exon	13745255	13745291	100	+	.	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 2385 2421 +
Chr2	stalkie_big_nohaplotig	CDS	13713091	13713833	.	+	0	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 1 740 +
Chr2	stalkie_big_nohaplotig	CDS	13718934	13719085	.	+	1	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 741 892 +
Chr2	stalkie_big_nohaplotig	CDS	13726796	13726941	.	+	2	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 893 1038 +
Chr2	stalkie_big_nohaplotig	CDS	13727992	13728430	.	+	0	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 1039 1477 +
Chr2	stalkie_big_nohaplotig	CDS	13731185	13731322	.	+	2	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 1478 1615 +
Chr2	stalkie_big_nohaplotig	CDS	13732028	13732174	.	+	2	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 1616 1762 +
Chr2	stalkie_big_nohaplotig	CDS	13732316	13732444	.	+	2	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 1763 1891 +
Chr2	stalkie_big_nohaplotig	CDS	13734673	13734746	.	+	2	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 1892 1965 +
Chr2	stalkie_big_nohaplotig	CDS	13742633	13742733	.	+	0	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 1966 2066 +
Chr2	stalkie_big_nohaplotig	CDS	13742794	13742909	.	+	1	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 2067 2182 +
Chr2	stalkie_big_nohaplotig	CDS	13743006	13743114	.	+	2	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 2183 2291 +
Chr2	stalkie_big_nohaplotig	CDS	13744837	13744932	.	+	1	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 2292 2384 +
Chr2	stalkie_big_nohaplotig	CDS	13745255	13745291	.	+	1	Parent=FBgn0030887.1.mrna1;Target=FBgn0030887.1 2385 2421 +
Chr2	gffcl	locus	13737889	13738684	.	+	.	ID=RLOC_00014929;geneIDs=comp135272_c0_seq1.path1;transcripts=comp135272_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13737889	13738684	.	+	.	ID=comp135272_c0_seq1.mrna1;geneID=comp135272_c0_seq1.path1;Name=comp135272_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.4;matches=783;mismatches=13;indels=0;unknowns=0;Target=comp135272_c0_seq1 797 2 .;CDS_Target=comp135272_c0_seq1 628 509 .;locus=RLOC_00014929
Chr2	stalkie_big_nohaplotig	exon	13737889	13738684	98	+	.	Parent=comp135272_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	13738396	13738515	.	+	0	Parent=comp135272_c0_seq1.mrna1
Chr2	gffcl	locus	13760721	13761047	.	-	.	ID=RLOC_00014930;geneIDs=comp141766_c0_seq1.path1;transcripts=comp141766_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13760721	13761047	.	-	.	ID=comp141766_c0_seq1.mrna1;geneID=comp141766_c0_seq1.path1;Name=comp141766_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=322;mismatches=4;indels=2;unknowns=0;Target=comp141766_c0_seq1 327 1 .;CDS_Target=comp141766_c0_seq1 326 216 .;locus=RLOC_00014930
Chr2	stalkie_big_nohaplotig	exon	13760721	13761047	98	-	.	Parent=comp141766_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	13760722	13760833	.	-	0	Parent=comp141766_c0_seq1.mrna1
Chr2	gffcl	locus	13807278	13807396	.	-	.	ID=RLOC_00014931;geneIDs=comp142516_c0_seq1.path1;transcripts=comp142516_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13807278	13807396	.	-	.	ID=comp142516_c0_seq1.mrna1;geneID=comp142516_c0_seq1.path1;Name=comp142516_c0_seq1;Dir=indeterminatecoverage=21.2;identity=98.3;matches=117;mismatches=2;indels=0;unknowns=0;Target=comp142516_c0_seq1 119 1 .;locus=RLOC_00014931
Chr2	stalkie_big_nohaplotig	exon	13807278	13807396	98	-	.	Parent=comp142516_c0_seq1.mrna1
Chr2	gffcl	locus	13823524	13826963	.	-	.	ID=RLOC_00014932;geneIDs=comp149510_c0_seq1.path1;transcripts=comp149510_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13823524	13826963	.	-	.	ID=comp149510_c0_seq1.mrna1;geneID=comp149510_c0_seq1.path1;Name=comp149510_c0_seq1;Dir=antisensecoverage=83.4;identity=92.2;matches=735;mismatches=39;indels=23;unknowns=0;Target=comp149510_c0_seq1 577 651 .;locus=RLOC_00014932
Chr2	stalkie_big_nohaplotig	exon	13823524	13823929	97	-	.	Parent=comp149510_c0_seq1.mrna1;Target=comp149510_c0_seq1 5 410 -
Chr2	stalkie_big_nohaplotig	exon	13826579	13826963	86	-	.	Parent=comp149510_c0_seq1.mrna1;Target=comp149510_c0_seq1 411 784 -
Chr2	stalkie_big_nohaplotig	CDS	13826740	13826814	.	-	0	Parent=comp149510_c0_seq1.mrna1
Chr2	gffcl	locus	13831749	13833002	.	-	.	ID=RLOC_00014933;geneIDs=FBgn0002413.2.path1;transcripts=FBgn0002413.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13831749	13833002	.	-	.	ID=FBgn0002413.2.mrna1;geneID=FBgn0002413.2.path1;Name=FBgn0002413.2;Dir=indeterminatecoverage=100.0;identity=98.1;matches=1230;mismatches=24;indels=0;unknowns=0;Target=FBgn0002413.2 1254 1 .;locus=RLOC_00014933
Chr2	stalkie_big_nohaplotig	exon	13831749	13833002	98	-	.	Parent=FBgn0002413.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	13831749	13833002	.	-	0	Parent=FBgn0002413.2.mrna1
Chr2	gffcl	locus	13888679	14070620	.	-	.	ID=RLOC_00014934;geneIDs=comp163391_c0_seq1.path1;transcripts=comp163391_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13888679	14070620	.	-	.	ID=comp163391_c0_seq1.mrna1;geneID=comp163391_c0_seq1.path1;Name=comp163391_c0_seq1;Dir=antisensecoverage=56.9;identity=98.0;matches=3910;mismatches=20;indels=59;unknowns=0;locus=RLOC_00014934
Chr2	stalkie_big_nohaplotig	exon	13888679	13888763	100	-	.	Parent=comp163391_c0_seq1.mrna1;Target=comp163391_c0_seq1 2993 3077 -
Chr2	stalkie_big_nohaplotig	exon	13903711	13905268	98	-	.	Parent=comp163391_c0_seq1.mrna1;Target=comp163391_c0_seq1 3078 4636 -
Chr2	stalkie_big_nohaplotig	exon	13970098	13970456	94	-	.	Parent=comp163391_c0_seq1.mrna1;Target=comp163391_c0_seq1 4637 4977 -
Chr2	stalkie_big_nohaplotig	exon	13973038	13973529	98	-	.	Parent=comp163391_c0_seq1.mrna1;Target=comp163391_c0_seq1 4978 5461 -
Chr2	stalkie_big_nohaplotig	exon	14069144	14070620	97	-	.	Parent=comp163391_c0_seq1.mrna1;Target=comp163391_c0_seq1 5462 6940 -
Chr2	stalkie_big_nohaplotig	CDS	13904414	13905268	.	-	1	Parent=comp163391_c0_seq1.mrna1;Target=comp163391_c0_seq1 3781 4636 .
Chr2	stalkie_big_nohaplotig	CDS	13970098	13970213	.	-	0	Parent=comp163391_c0_seq1.mrna1;Target=comp163391_c0_seq1 4637 4752 .
Chr2	gffcl	locus	13913835	13914285	.	+	.	ID=RLOC_00014935;geneIDs=FBgn0054026.1.path1;transcripts=FBgn0054026.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13913835	13914285	.	+	.	ID=FBgn0054026.1.mrna1;geneID=FBgn0054026.1.path1;Name=FBgn0054026.1;Dir=sensecoverage=100.0;identity=98.6;matches=358;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014935
Chr2	stalkie_big_nohaplotig	exon	13913835	13914023	100	+	.	Parent=FBgn0054026.1.mrna1;Target=FBgn0054026.1 1 189 +
Chr2	stalkie_big_nohaplotig	exon	13914112	13914285	97	+	.	Parent=FBgn0054026.1.mrna1;Target=FBgn0054026.1 190 363 +
Chr2	stalkie_big_nohaplotig	CDS	13913835	13914023	.	+	0	Parent=FBgn0054026.1.mrna1;Target=FBgn0054026.1 1 189 +
Chr2	stalkie_big_nohaplotig	CDS	13914112	13914285	.	+	0	Parent=FBgn0054026.1.mrna1;Target=FBgn0054026.1 190 363 +
Chr2	gffcl	locus	13917505	13918155	.	+	.	ID=RLOC_00014936;geneIDs=comp144244_c0_seq1.path1;transcripts=comp144244_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13917505	13918155	.	+	.	ID=comp144244_c0_seq1.mrna1;geneID=comp144244_c0_seq1.path1;Name=comp144244_c0_seq1;Dir=antisensecoverage=97.5;identity=98.6;matches=575;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014936
Chr2	stalkie_big_nohaplotig	exon	13917505	13917799	98	+	.	Parent=comp144244_c0_seq1.mrna1;Target=comp144244_c0_seq1 304 598 -
Chr2	stalkie_big_nohaplotig	exon	13917868	13918155	98	+	.	Parent=comp144244_c0_seq1.mrna1;Target=comp144244_c0_seq1 16 303 -
Chr2	stalkie_big_nohaplotig	CDS	13917611	13917799	.	+	0	Parent=comp144244_c0_seq1.mrna1;Target=comp144244_c0_seq1 304 492 .
Chr2	stalkie_big_nohaplotig	CDS	13917868	13918044	.	+	0	Parent=comp144244_c0_seq1.mrna1;Target=comp144244_c0_seq1 127 303 .
Chr2	gffcl	locus	13920062	13920766	.	+	.	ID=RLOC_00014937;geneIDs=comp144005_c0_seq1.path1;transcripts=comp144005_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13920062	13920766	.	+	.	ID=comp144005_c0_seq1.mrna1;geneID=comp144005_c0_seq1.path1;Name=comp144005_c0_seq1;Dir=antisensecoverage=98.8;identity=98.3;matches=630;mismatches=11;indels=0;unknowns=0;locus=RLOC_00014937
Chr2	stalkie_big_nohaplotig	exon	13920062	13920408	98	+	.	Parent=comp144005_c0_seq1.mrna1;Target=comp144005_c0_seq1 303 649 -
Chr2	stalkie_big_nohaplotig	exon	13920473	13920766	98	+	.	Parent=comp144005_c0_seq1.mrna1;Target=comp144005_c0_seq1 9 302 -
Chr2	stalkie_big_nohaplotig	CDS	13920220	13920408	.	+	0	Parent=comp144005_c0_seq1.mrna1;Target=comp144005_c0_seq1 303 491 .
Chr2	stalkie_big_nohaplotig	CDS	13920473	13920649	.	+	0	Parent=comp144005_c0_seq1.mrna1;Target=comp144005_c0_seq1 126 302 .
Chr2	gffcl	locus	13923645	13928799	.	-	.	ID=RLOC_00014938;geneIDs=Dv_FBgn0209021.1.path1;transcripts=Dv_FBgn0209021.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13923645	13928799	.	-	.	ID=Dv_FBgn0209021.1.mrna1;geneID=Dv_FBgn0209021.1.path1;Name=Dv_FBgn0209021.1;Dir=sensecoverage=100.0;identity=100.0;matches=366;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014938
Chr2	stalkie_big_nohaplotig	exon	13923645	13923818	100	-	.	Parent=Dv_FBgn0209021.1.mrna1;Target=Dv_FBgn0209021.1 193 366 +
Chr2	stalkie_big_nohaplotig	exon	13928608	13928799	100	-	.	Parent=Dv_FBgn0209021.1.mrna1;Target=Dv_FBgn0209021.1 1 192 +
Chr2	stalkie_big_nohaplotig	CDS	13923645	13923818	.	-	0	Parent=Dv_FBgn0209021.1.mrna1;Target=Dv_FBgn0209021.1 193 366 +
Chr2	stalkie_big_nohaplotig	CDS	13928608	13928799	.	-	0	Parent=Dv_FBgn0209021.1.mrna1;Target=Dv_FBgn0209021.1 1 192 +
Chr2	gffcl	locus	13928903	13929167	.	-	.	ID=RLOC_00014939;geneIDs=comp116508_c0_seq1.path1;transcripts=comp116508_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13928903	13929167	.	-	.	ID=comp116508_c0_seq1.mrna1;geneID=comp116508_c0_seq1.path1;Name=comp116508_c0_seq1;Dir=indeterminatecoverage=43.7;identity=98.1;matches=260;mismatches=2;indels=3;unknowns=0;Target=comp116508_c0_seq1 281 20 .;CDS_Target=comp116508_c0_seq1 173 21 .;locus=RLOC_00014939
Chr2	stalkie_big_nohaplotig	exon	13928903	13929167	98	-	.	Parent=comp116508_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	13929011	13929166	.	-	0	Parent=comp116508_c0_seq1.mrna1
Chr2	gffcl	locus	13932410	13932841	.	+	.	ID=RLOC_00014940;geneIDs=FBgn0033788.1.path1;transcripts=FBgn0033788.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	13932410	13932841	.	+	.	ID=FBgn0033788.1.mrna1;geneID=FBgn0033788.1.path1;Name=FBgn0033788.1;Dir=sensecoverage=100.0;identity=98.4;matches=360;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014940
Chr2	stalkie_big_nohaplotig	exon	13932410	13932601	98	+	.	Parent=FBgn0033788.1.mrna1;Target=FBgn0033788.1 1 192 +
Chr2	stalkie_big_nohaplotig	exon	13932668	13932841	97	+	.	Parent=FBgn0033788.1.mrna1;Target=FBgn0033788.1 193 366 +
Chr2	stalkie_big_nohaplotig	CDS	13932410	13932601	.	+	0	Parent=FBgn0033788.1.mrna1;Target=FBgn0033788.1 1 192 +
Chr2	stalkie_big_nohaplotig	CDS	13932668	13932841	.	+	0	Parent=FBgn0033788.1.mrna1;Target=FBgn0033788.1 193 366 +
Chr2	gffcl	locus	14009028	14010425	.	+	.	ID=RLOC_00014941;geneIDs=FBgn0010611.1.path1;transcripts=FBgn0010611.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14009028	14010425	.	+	.	ID=FBgn0010611.1.mrna1;geneID=FBgn0010611.1.path1;Name=FBgn0010611.1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1386;mismatches=12;indels=0;unknowns=0;Target=FBgn0010611.1 1398 1 .;locus=RLOC_00014941
Chr2	stalkie_big_nohaplotig	exon	14009028	14010425	99	+	.	Parent=FBgn0010611.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	14009028	14010425	.	+	0	Parent=FBgn0010611.1.mrna1
Chr2	gffcl	locus	14012640	14016895	.	-	.	ID=RLOC_00014942;geneIDs=FBgn0034117.1.path1;transcripts=FBgn0034117.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14012640	14016895	.	-	.	ID=FBgn0034117.1.mrna1;geneID=FBgn0034117.1.path1;Name=FBgn0034117.1;Dir=sensecoverage=100.0;identity=99.8;matches=1257;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014942
Chr2	stalkie_big_nohaplotig	exon	14012640	14012668	100	-	.	Parent=FBgn0034117.1.mrna1;Target=FBgn0034117.1 1232 1260 +
Chr2	stalkie_big_nohaplotig	exon	14012729	14012804	100	-	.	Parent=FBgn0034117.1.mrna1;Target=FBgn0034117.1 1156 1231 +
Chr2	stalkie_big_nohaplotig	exon	14012867	14013019	100	-	.	Parent=FBgn0034117.1.mrna1;Target=FBgn0034117.1 1003 1155 +
Chr2	stalkie_big_nohaplotig	exon	14013088	14013160	100	-	.	Parent=FBgn0034117.1.mrna1;Target=FBgn0034117.1 930 1002 +
Chr2	stalkie_big_nohaplotig	exon	14013236	14013375	100	-	.	Parent=FBgn0034117.1.mrna1;Target=FBgn0034117.1 790 929 +
Chr2	stalkie_big_nohaplotig	exon	14013442	14013603	100	-	.	Parent=FBgn0034117.1.mrna1;Target=FBgn0034117.1 628 789 +
Chr2	stalkie_big_nohaplotig	exon	14013669	14013938	98	-	.	Parent=FBgn0034117.1.mrna1;Target=FBgn0034117.1 358 627 +
Chr2	stalkie_big_nohaplotig	exon	14014009	14014186	100	-	.	Parent=FBgn0034117.1.mrna1;Target=FBgn0034117.1 180 357 +
Chr2	stalkie_big_nohaplotig	exon	14016717	14016895	100	-	.	Parent=FBgn0034117.1.mrna1;Target=FBgn0034117.1 1 179 +
Chr2	stalkie_big_nohaplotig	CDS	14012640	14012668	.	-	2	Parent=FBgn0034117.1.mrna1;Target=FBgn0034117.1 1232 1260 +
Chr2	stalkie_big_nohaplotig	CDS	14012729	14012804	.	-	0	Parent=FBgn0034117.1.mrna1;Target=FBgn0034117.1 1156 1231 +
Chr2	stalkie_big_nohaplotig	CDS	14012867	14013019	.	-	0	Parent=FBgn0034117.1.mrna1;Target=FBgn0034117.1 1003 1155 +
Chr2	stalkie_big_nohaplotig	CDS	14013088	14013160	.	-	1	Parent=FBgn0034117.1.mrna1;Target=FBgn0034117.1 930 1002 +
Chr2	stalkie_big_nohaplotig	CDS	14013236	14013375	.	-	0	Parent=FBgn0034117.1.mrna1;Target=FBgn0034117.1 790 929 +
Chr2	stalkie_big_nohaplotig	CDS	14013442	14013603	.	-	0	Parent=FBgn0034117.1.mrna1;Target=FBgn0034117.1 628 789 +
Chr2	stalkie_big_nohaplotig	CDS	14013669	14013938	.	-	0	Parent=FBgn0034117.1.mrna1;Target=FBgn0034117.1 358 627 +
Chr2	stalkie_big_nohaplotig	CDS	14014009	14014186	.	-	1	Parent=FBgn0034117.1.mrna1;Target=FBgn0034117.1 180 357 +
Chr2	stalkie_big_nohaplotig	CDS	14016717	14016895	.	-	0	Parent=FBgn0034117.1.mrna1;Target=FBgn0034117.1 1 179 +
Chr2	gffcl	locus	14032414	14044256	.	+	.	ID=RLOC_00014943;geneIDs=FBgn0262511.1.path1;transcripts=FBgn0262511.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14032414	14044256	.	+	.	ID=FBgn0262511.1.mrna1;geneID=FBgn0262511.1.path1;Name=FBgn0262511.1;Dir=sensecoverage=100.0;identity=99.8;matches=1177;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014943
Chr2	stalkie_big_nohaplotig	exon	14032414	14032563	98	+	.	Parent=FBgn0262511.1.mrna1;Target=FBgn0262511.1 1 150 +
Chr2	stalkie_big_nohaplotig	exon	14032867	14033020	100	+	.	Parent=FBgn0262511.1.mrna1;Target=FBgn0262511.1 151 304 +
Chr2	stalkie_big_nohaplotig	exon	14042681	14042867	100	+	.	Parent=FBgn0262511.1.mrna1;Target=FBgn0262511.1 305 491 +
Chr2	stalkie_big_nohaplotig	exon	14042938	14043036	100	+	.	Parent=FBgn0262511.1.mrna1;Target=FBgn0262511.1 492 590 +
Chr2	stalkie_big_nohaplotig	exon	14043103	14043358	100	+	.	Parent=FBgn0262511.1.mrna1;Target=FBgn0262511.1 591 846 +
Chr2	stalkie_big_nohaplotig	exon	14043422	14043519	100	+	.	Parent=FBgn0262511.1.mrna1;Target=FBgn0262511.1 847 944 +
Chr2	stalkie_big_nohaplotig	exon	14043967	14044105	100	+	.	Parent=FBgn0262511.1.mrna1;Target=FBgn0262511.1 945 1083 +
Chr2	stalkie_big_nohaplotig	exon	14044161	14044256	100	+	.	Parent=FBgn0262511.1.mrna1;Target=FBgn0262511.1 1084 1179 +
Chr2	stalkie_big_nohaplotig	CDS	14032414	14032563	.	+	0	Parent=FBgn0262511.1.mrna1;Target=FBgn0262511.1 1 150 +
Chr2	stalkie_big_nohaplotig	CDS	14032867	14033020	.	+	0	Parent=FBgn0262511.1.mrna1;Target=FBgn0262511.1 151 304 +
Chr2	stalkie_big_nohaplotig	CDS	14042681	14042867	.	+	2	Parent=FBgn0262511.1.mrna1;Target=FBgn0262511.1 305 491 +
Chr2	stalkie_big_nohaplotig	CDS	14042938	14043036	.	+	1	Parent=FBgn0262511.1.mrna1;Target=FBgn0262511.1 492 590 +
Chr2	stalkie_big_nohaplotig	CDS	14043103	14043358	.	+	1	Parent=FBgn0262511.1.mrna1;Target=FBgn0262511.1 591 846 +
Chr2	stalkie_big_nohaplotig	CDS	14043422	14043519	.	+	0	Parent=FBgn0262511.1.mrna1;Target=FBgn0262511.1 847 944 +
Chr2	stalkie_big_nohaplotig	CDS	14043967	14044105	.	+	1	Parent=FBgn0262511.1.mrna1;Target=FBgn0262511.1 945 1083 +
Chr2	stalkie_big_nohaplotig	CDS	14044161	14044256	.	+	0	Parent=FBgn0262511.1.mrna1;Target=FBgn0262511.1 1084 1179 +
Chr2	stalkie_big_nohaplotig	mRNA	14047581	14253960	.	-	.	ID=FBgn0020258.1.mrna1;geneID=FBgn0020258.1.path1;Name=FBgn0020258.1;Dir=sensecoverage=79.0;identity=96.0;matches=1386;mismatches=36;indels=22;unknowns=0;locus=RLOC_00014944
Chr2	stalkie_big_nohaplotig	exon	14047581	14047827	97	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 1581 1827 +
Chr2	stalkie_big_nohaplotig	exon	14047888	14048128	96	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 1340 1580 +
Chr2	stalkie_big_nohaplotig	exon	14048198	14048328	96	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 1209 1339 +
Chr2	stalkie_big_nohaplotig	exon	14049462	14049601	99	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 1069 1208 +
Chr2	stalkie_big_nohaplotig	exon	14049677	14049914	98	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 831 1068 +
Chr2	stalkie_big_nohaplotig	exon	14049972	14050221	99	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 581 830 +
Chr2	stalkie_big_nohaplotig	exon	14102860	14102875	87	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 565 580 +
Chr2	stalkie_big_nohaplotig	exon	14107263	14107267	100	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 560 564 +
Chr2	stalkie_big_nohaplotig	exon	14110080	14110081	100	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 558 559 +
Chr2	stalkie_big_nohaplotig	exon	14141863	14141871	100	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 549 557 +
Chr2	stalkie_big_nohaplotig	exon	14145634	14145635	100	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 547 548 +
Chr2	stalkie_big_nohaplotig	exon	14151979	14151980	100	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 545 546 +
Chr2	stalkie_big_nohaplotig	exon	14159636	14159639	100	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 541 544 +
Chr2	stalkie_big_nohaplotig	exon	14161223	14161229	100	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 534 540 +
Chr2	stalkie_big_nohaplotig	exon	14164322	14164323	100	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 532 533 +
Chr2	stalkie_big_nohaplotig	exon	14169828	14169832	100	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 527 531 +
Chr2	stalkie_big_nohaplotig	exon	14173515	14173516	100	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 525 526 +
Chr2	stalkie_big_nohaplotig	exon	14181130	14181136	100	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 518 524 +
Chr2	stalkie_big_nohaplotig	exon	14186202	14186206	100	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 513 517 +
Chr2	stalkie_big_nohaplotig	exon	14193727	14193735	100	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 504 512 +
Chr2	stalkie_big_nohaplotig	exon	14198645	14198646	100	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 502 503 +
Chr2	stalkie_big_nohaplotig	exon	14206568	14206569	100	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 500 501 +
Chr2	stalkie_big_nohaplotig	exon	14214013	14214014	100	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 498 499 +
Chr2	stalkie_big_nohaplotig	exon	14215917	14215920	100	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 494 497 +
Chr2	stalkie_big_nohaplotig	exon	14221218	14221226	100	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 485 493 +
Chr2	stalkie_big_nohaplotig	exon	14226780	14226787	100	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 477 484 +
Chr2	stalkie_big_nohaplotig	exon	14229697	14229699	100	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 474 476 +
Chr2	stalkie_big_nohaplotig	exon	14230089	14230108	80	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 454 473 +
Chr2	stalkie_big_nohaplotig	exon	14242448	14242449	100	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 452 453 +
Chr2	stalkie_big_nohaplotig	exon	14249317	14249326	100	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 442 451 +
Chr2	stalkie_big_nohaplotig	exon	14253924	14253960	50	-	.	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 385 441 +
Chr2	stalkie_big_nohaplotig	CDS	14230102	14230108	.	-	0	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 454 460 +
Chr2	stalkie_big_nohaplotig	CDS	14242448	14242449	.	-	2	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 452 453 +
Chr2	stalkie_big_nohaplotig	CDS	14249317	14249326	.	-	0	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 442 451 +
Chr2	stalkie_big_nohaplotig	CDS	14253924	14253959	.	-	0	Parent=FBgn0020258.1.mrna1;Target=FBgn0020258.1 386 441 +
Chr2	stalkie_big_nohaplotig	mRNA	14246310	14249339	.	+	.	ID=FBgn0033936.1.mrna1;geneID=FBgn0033936.1.path1;Name=FBgn0033936.1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=3003;mismatches=24;indels=3;unknowns=0;Target=FBgn0033936.1 3027 1 .;locus=RLOC_00014944
Chr2	stalkie_big_nohaplotig	exon	14246310	14249339	99	+	.	Parent=FBgn0033936.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	14246310	14249339	.	+	0	Parent=FBgn0033936.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16073763	16074569	.	+	.	ID=comp149575_c0_seq1.mrna1;geneID=comp149575_c0_seq1.path1;Name=comp149575_c0_seq1;Dir=indeterminatecoverage=99.3;identity=92.1;matches=758;mismatches=40;indels=25;unknowns=0;Target=comp149575_c0_seq1 814 1 .;CDS_Target=comp149575_c0_seq1 62 45 .;locus=RLOC_00014944
Chr2	stalkie_big_nohaplotig	exon	16073763	16074569	92	+	.	Parent=comp149575_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16073807	16073825	.	+	0	Parent=comp149575_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16104369	16117748	.	-	.	ID=comp116447_c0_seq1.mrna1;geneID=comp116447_c0_seq1.path1;Name=comp116447_c0_seq1;Dir=antisensecoverage=100.0;identity=99.2;matches=514;mismatches=4;indels=0;unknowns=0;locus=RLOC_00014944
Chr2	stalkie_big_nohaplotig	exon	16104369	16104390	100	-	.	Parent=comp116447_c0_seq1.mrna1;Target=comp116447_c0_seq1 1 22 -
Chr2	stalkie_big_nohaplotig	exon	16106389	16106791	99	-	.	Parent=comp116447_c0_seq1.mrna1;Target=comp116447_c0_seq1 23 425 -
Chr2	stalkie_big_nohaplotig	exon	16117656	16117748	100	-	.	Parent=comp116447_c0_seq1.mrna1;Target=comp116447_c0_seq1 426 518 -
Chr2	stalkie_big_nohaplotig	CDS	16104370	16104390	.	-	0	Parent=comp116447_c0_seq1.mrna1;Target=comp116447_c0_seq1 2 22 .
Chr2	stalkie_big_nohaplotig	CDS	16106389	16106658	.	-	0	Parent=comp116447_c0_seq1.mrna1;Target=comp116447_c0_seq1 23 292 .
Chr2	stalkie_big_nohaplotig	mRNA	18071761	18072285	.	-	.	ID=FBgn0023167.1.mrna1;geneID=FBgn0023167.1.path1;Name=FBgn0023167.1;Dir=sensecoverage=100.0;identity=100.0;matches=456;mismatches=0;indels=0;unknowns=0;locus=RLOC_00014944
Chr2	stalkie_big_nohaplotig	exon	18071761	18071885	100	-	.	Parent=FBgn0023167.1.mrna1;Target=FBgn0023167.1 332 456 +
Chr2	stalkie_big_nohaplotig	exon	18071955	18072285	100	-	.	Parent=FBgn0023167.1.mrna1;Target=FBgn0023167.1 1 331 +
Chr2	stalkie_big_nohaplotig	CDS	18071761	18071885	.	-	2	Parent=FBgn0023167.1.mrna1;Target=FBgn0023167.1 332 456 +
Chr2	stalkie_big_nohaplotig	CDS	18071955	18072285	.	-	0	Parent=FBgn0023167.1.mrna1;Target=FBgn0023167.1 1 331 +
Chr2	gffcl	locus	14112361	14112578	.	-	.	ID=RLOC_00014945;geneIDs=comp106536_c0_seq1.path1;transcripts=comp106536_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14112361	14112578	.	-	.	ID=comp106536_c0_seq1.mrna1;geneID=comp106536_c0_seq1.path1;Name=comp106536_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=215;mismatches=3;indels=0;unknowns=0;Target=comp106536_c0_seq1 218 1 .;CDS_Target=comp106536_c0_seq1 148 2 .;locus=RLOC_00014945
Chr2	stalkie_big_nohaplotig	exon	14112361	14112578	98	-	.	Parent=comp106536_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	14112431	14112577	.	-	0	Parent=comp106536_c0_seq1.mrna1
Chr2	gffcl	locus	14207241	14207519	.	-	.	ID=RLOC_00014946;geneIDs=comp50629_c0_seq1.path1;transcripts=comp50629_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14207241	14207519	.	-	.	ID=comp50629_c0_seq1.mrna1;geneID=comp50629_c0_seq1.path1;Name=comp50629_c0_seq1;Dir=indeterminatecoverage=95.2;identity=100.0;matches=279;mismatches=0;indels=0;unknowns=0;Target=comp50629_c0_seq1 279 1 .;CDS_Target=comp50629_c0_seq1 114 1 .;locus=RLOC_00014946
Chr2	stalkie_big_nohaplotig	exon	14207241	14207519	100	-	.	Parent=comp50629_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	14207406	14207519	.	-	0	Parent=comp50629_c0_seq1.mrna1
Chr2	gffcl	locus	14208359	14212881	.	-	.	ID=RLOC_00014947;geneIDs=FBgn0033010.1.path1;transcripts=FBgn0033010.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14208359	14212881	.	-	.	ID=FBgn0033010.1.mrna1;geneID=FBgn0033010.1.path1;Name=FBgn0033010.1;Dir=sensecoverage=99.5;identity=98.8;matches=2019;mismatches=25;indels=0;unknowns=0;locus=RLOC_00014947
Chr2	stalkie_big_nohaplotig	exon	14208359	14209837	99	-	.	Parent=FBgn0033010.1.mrna1;Target=FBgn0033010.1 577 2055 +
Chr2	stalkie_big_nohaplotig	exon	14212317	14212881	97	-	.	Parent=FBgn0033010.1.mrna1;Target=FBgn0033010.1 12 576 +
Chr2	stalkie_big_nohaplotig	CDS	14208359	14209837	.	-	0	Parent=FBgn0033010.1.mrna1;Target=FBgn0033010.1 577 2055 +
Chr2	stalkie_big_nohaplotig	CDS	14212317	14212880	.	-	0	Parent=FBgn0033010.1.mrna1;Target=FBgn0033010.1 13 576 +
Chr2	gffcl	locus	14219861	14221760	.	+	.	ID=RLOC_00014948;geneIDs=FBgn0033935.1.path1;transcripts=FBgn0033935.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14219861	14221760	.	+	.	ID=FBgn0033935.1.mrna1;geneID=FBgn0033935.1.path1;Name=FBgn0033935.1;Dir=sensecoverage=100.0;identity=98.5;matches=1717;mismatches=26;indels=0;unknowns=0;locus=RLOC_00014948
Chr2	stalkie_big_nohaplotig	exon	14219861	14219935	100	+	.	Parent=FBgn0033935.1.mrna1;Target=FBgn0033935.1 1 75 +
Chr2	stalkie_big_nohaplotig	exon	14220029	14220727	97	+	.	Parent=FBgn0033935.1.mrna1;Target=FBgn0033935.1 76 774 +
Chr2	stalkie_big_nohaplotig	exon	14220792	14221760	98	+	.	Parent=FBgn0033935.1.mrna1;Target=FBgn0033935.1 775 1743 +
Chr2	stalkie_big_nohaplotig	CDS	14219861	14219935	.	+	0	Parent=FBgn0033935.1.mrna1;Target=FBgn0033935.1 1 75 +
Chr2	stalkie_big_nohaplotig	CDS	14220029	14220727	.	+	0	Parent=FBgn0033935.1.mrna1;Target=FBgn0033935.1 76 774 +
Chr2	stalkie_big_nohaplotig	CDS	14220792	14221760	.	+	0	Parent=FBgn0033935.1.mrna1;Target=FBgn0033935.1 775 1743 +
Chr2	gffcl	locus	14250183	14250464	.	+	.	ID=RLOC_00014949;geneIDs=comp116179_c0_seq1.path1;transcripts=comp116179_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14250183	14250464	.	+	.	ID=comp116179_c0_seq1.mrna1;geneID=comp116179_c0_seq1.path1;Name=comp116179_c0_seq1;Dir=indeterminatecoverage=89.8;identity=97.5;matches=276;mismatches=6;indels=1;unknowns=0;Target=comp116179_c0_seq1 283 1 .;CDS_Target=comp116179_c0_seq1 53 3 .;locus=RLOC_00014949
Chr2	stalkie_big_nohaplotig	exon	14250183	14250464	97	+	.	Parent=comp116179_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	14250185	14250234	.	+	0	Parent=comp116179_c0_seq1.mrna1
Chr2	gffcl	locus	14250730	14251239	.	-	.	ID=RLOC_00014950;geneIDs=comp121590_c0_seq1.path1;transcripts=comp121590_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14250730	14251239	.	-	.	ID=comp121590_c0_seq1.mrna1;geneID=comp121590_c0_seq1.path1;Name=comp121590_c0_seq1;Dir=indeterminatecoverage=97.7;identity=99.0;matches=505;mismatches=5;indels=0;unknowns=0;Target=comp121590_c0_seq1 522 13 .;CDS_Target=comp121590_c0_seq1 370 227 .;locus=RLOC_00014950
Chr2	stalkie_big_nohaplotig	exon	14250730	14251239	99	-	.	Parent=comp121590_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	14250882	14251025	.	-	0	Parent=comp121590_c0_seq1.mrna1
Chr2	gffcl	locus	14251698	16245792	.	+	.	ID=RLOC_00014951;geneIDs=comp146061_c0_seq1.path1;transcripts=comp146061_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14251698	16245792	.	+	.	ID=comp146061_c0_seq1.mrna1;geneID=comp146061_c0_seq1.path1;Name=comp146061_c0_seq1;Dir=indeterminatecoverage=54.8;identity=93.0;matches=825;mismatches=38;indels=24;unknowns=0;Target=comp146061_c0_seq1 1360 1199 .;locus=RLOC_00014951
Chr2	stalkie_big_nohaplotig	exon	14251698	14252494	92	+	.	Parent=comp146061_c0_seq1.mrna1;Target=comp146061_c0_seq1 1498 716 .
Chr2	stalkie_big_nohaplotig	exon	16183346	16183349	100	+	.	Parent=comp146061_c0_seq1.mrna1;Target=comp146061_c0_seq1 1503 1500 .
Chr2	stalkie_big_nohaplotig	exon	16189715	16189719	100	+	.	Parent=comp146061_c0_seq1.mrna1;Target=comp146061_c0_seq1 1508 1504 .
Chr2	stalkie_big_nohaplotig	exon	16201960	16201970	100	+	.	Parent=comp146061_c0_seq1.mrna1;Target=comp146061_c0_seq1 1519 1509 .
Chr2	stalkie_big_nohaplotig	exon	16202542	16202546	100	+	.	Parent=comp146061_c0_seq1.mrna1;Target=comp146061_c0_seq1 1524 1520 .
Chr2	stalkie_big_nohaplotig	exon	16204161	16204165	100	+	.	Parent=comp146061_c0_seq1.mrna1;Target=comp146061_c0_seq1 1529 1525 .
Chr2	stalkie_big_nohaplotig	exon	16211587	16211590	100	+	.	Parent=comp146061_c0_seq1.mrna1;Target=comp146061_c0_seq1 1533 1530 .
Chr2	stalkie_big_nohaplotig	exon	16219461	16219462	100	+	.	Parent=comp146061_c0_seq1.mrna1;Target=comp146061_c0_seq1 1535 1534 .
Chr2	stalkie_big_nohaplotig	exon	16221846	16221849	100	+	.	Parent=comp146061_c0_seq1.mrna1;Target=comp146061_c0_seq1 1539 1536 .
Chr2	stalkie_big_nohaplotig	exon	16223107	16223110	100	+	.	Parent=comp146061_c0_seq1.mrna1;Target=comp146061_c0_seq1 1543 1540 .
Chr2	stalkie_big_nohaplotig	exon	16225209	16225210	100	+	.	Parent=comp146061_c0_seq1.mrna1;Target=comp146061_c0_seq1 1545 1544 .
Chr2	stalkie_big_nohaplotig	exon	16225575	16225577	100	+	.	Parent=comp146061_c0_seq1.mrna1;Target=comp146061_c0_seq1 1548 1546 .
Chr2	stalkie_big_nohaplotig	exon	16229199	16229203	100	+	.	Parent=comp146061_c0_seq1.mrna1;Target=comp146061_c0_seq1 1553 1549 .
Chr2	stalkie_big_nohaplotig	exon	16231589	16231593	100	+	.	Parent=comp146061_c0_seq1.mrna1;Target=comp146061_c0_seq1 1558 1554 .
Chr2	stalkie_big_nohaplotig	exon	16238435	16238438	100	+	.	Parent=comp146061_c0_seq1.mrna1;Target=comp146061_c0_seq1 1562 1559 .
Chr2	stalkie_big_nohaplotig	exon	16239478	16239480	100	+	.	Parent=comp146061_c0_seq1.mrna1;Target=comp146061_c0_seq1 1565 1563 .
Chr2	stalkie_big_nohaplotig	exon	16245775	16245792	100	+	.	Parent=comp146061_c0_seq1.mrna1;Target=comp146061_c0_seq1 1583 1566 .
Chr2	stalkie_big_nohaplotig	CDS	14252184	14252345	.	+	0	Parent=comp146061_c0_seq1.mrna1
Chr2	gffcl	locus	14252871	14253600	.	-	.	ID=RLOC_00014952;geneIDs=comp144603_c0_seq1.path1;transcripts=comp144603_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14252871	14253600	.	-	.	ID=comp144603_c0_seq1.mrna1;geneID=comp144603_c0_seq1.path1;Name=comp144603_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.1;matches=692;mismatches=20;indels=23;unknowns=0;Target=comp144603_c0_seq1 717 1 .;CDS_Target=comp144603_c0_seq1 631 563 .;locus=RLOC_00014952
Chr2	stalkie_big_nohaplotig	exon	14252871	14253600	94	-	.	Parent=comp144603_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	14252957	14253025	.	-	0	Parent=comp144603_c0_seq1.mrna1
Chr2	gffcl	locus	14265748	14268971	.	+	.	ID=RLOC_00014953;geneIDs=comp155190_c0_seq1.path1;transcripts=comp155190_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14265748	14268971	.	+	.	ID=comp155190_c0_seq1.mrna1;geneID=comp155190_c0_seq1.path1;Name=comp155190_c0_seq1;Dir=antisensecoverage=99.0;identity=97.3;matches=1607;mismatches=23;indels=22;unknowns=0;locus=RLOC_00014953
Chr2	stalkie_big_nohaplotig	exon	14265748	14265916	91	+	.	Parent=comp155190_c0_seq1.mrna1;Target=comp155190_c0_seq1 1486 1669 -
Chr2	stalkie_big_nohaplotig	exon	14266030	14266308	97	+	.	Parent=comp155190_c0_seq1.mrna1;Target=comp155190_c0_seq1 1207 1485 -
Chr2	stalkie_big_nohaplotig	exon	14266365	14266463	100	+	.	Parent=comp155190_c0_seq1.mrna1;Target=comp155190_c0_seq1 1108 1206 -
Chr2	stalkie_big_nohaplotig	exon	14266522	14266595	100	+	.	Parent=comp155190_c0_seq1.mrna1;Target=comp155190_c0_seq1 1034 1107 -
Chr2	stalkie_big_nohaplotig	exon	14267605	14267797	98	+	.	Parent=comp155190_c0_seq1.mrna1;Target=comp155190_c0_seq1 841 1033 -
Chr2	stalkie_big_nohaplotig	exon	14267869	14267996	98	+	.	Parent=comp155190_c0_seq1.mrna1;Target=comp155190_c0_seq1 713 840 -
Chr2	stalkie_big_nohaplotig	exon	14268074	14268349	98	+	.	Parent=comp155190_c0_seq1.mrna1;Target=comp155190_c0_seq1 437 712 -
Chr2	stalkie_big_nohaplotig	exon	14268494	14268683	93	+	.	Parent=comp155190_c0_seq1.mrna1;Target=comp155190_c0_seq1 240 436 -
Chr2	stalkie_big_nohaplotig	exon	14268750	14268971	99	+	.	Parent=comp155190_c0_seq1.mrna1;Target=comp155190_c0_seq1 18 239 -
Chr2	stalkie_big_nohaplotig	CDS	14266581	14266595	.	+	0	Parent=comp155190_c0_seq1.mrna1;Target=comp155190_c0_seq1 1034 1048 .
Chr2	stalkie_big_nohaplotig	CDS	14267605	14267797	.	+	0	Parent=comp155190_c0_seq1.mrna1;Target=comp155190_c0_seq1 841 1033 .
Chr2	stalkie_big_nohaplotig	CDS	14267869	14267996	.	+	2	Parent=comp155190_c0_seq1.mrna1;Target=comp155190_c0_seq1 713 840 .
Chr2	stalkie_big_nohaplotig	CDS	14268074	14268343	.	+	0	Parent=comp155190_c0_seq1.mrna1;Target=comp155190_c0_seq1 443 712 .
Chr2	gffcl	locus	14280116	14286019	.	+	.	ID=RLOC_00014954;geneIDs=FBgn0034520.1.path1;transcripts=FBgn0034520.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14280116	14286019	.	+	.	ID=FBgn0034520.1.mrna1;geneID=FBgn0034520.1.path1;Name=FBgn0034520.1;Dir=sensecoverage=100.0;identity=99.4;matches=1231;mismatches=8;indels=0;unknowns=0;locus=RLOC_00014954
Chr2	stalkie_big_nohaplotig	exon	14280116	14280386	98	+	.	Parent=FBgn0034520.1.mrna1;Target=FBgn0034520.1 1 271 +
Chr2	stalkie_big_nohaplotig	exon	14284991	14285139	99	+	.	Parent=FBgn0034520.1.mrna1;Target=FBgn0034520.1 272 420 +
Chr2	stalkie_big_nohaplotig	exon	14285201	14286019	99	+	.	Parent=FBgn0034520.1.mrna1;Target=FBgn0034520.1 421 1239 +
Chr2	stalkie_big_nohaplotig	CDS	14280116	14280386	.	+	0	Parent=FBgn0034520.1.mrna1;Target=FBgn0034520.1 1 271 +
Chr2	stalkie_big_nohaplotig	CDS	14284991	14285139	.	+	2	Parent=FBgn0034520.1.mrna1;Target=FBgn0034520.1 272 420 +
Chr2	stalkie_big_nohaplotig	CDS	14285201	14286019	.	+	0	Parent=FBgn0034520.1.mrna1;Target=FBgn0034520.1 421 1239 +
Chr2	gffcl	locus	14287046	14289694	.	-	.	ID=RLOC_00014955;geneIDs=FBgn0034521.1.path1;transcripts=FBgn0034521.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14287046	14289694	.	-	.	ID=FBgn0034521.1.mrna1;geneID=FBgn0034521.1.path1;Name=FBgn0034521.1;Dir=sensecoverage=100.0;identity=99.4;matches=1401;mismatches=8;indels=1;unknowns=0;Target=FBgn0034521.1 3 95 +;locus=RLOC_00014955
Chr2	stalkie_big_nohaplotig	exon	14287046	14287156	100	-	.	Parent=FBgn0034521.1.mrna1;Target=FBgn0034521.1 1300 1410 +
Chr2	stalkie_big_nohaplotig	exon	14287216	14287386	100	-	.	Parent=FBgn0034521.1.mrna1;Target=FBgn0034521.1 1129 1299 +
Chr2	stalkie_big_nohaplotig	exon	14287471	14287561	100	-	.	Parent=FBgn0034521.1.mrna1;Target=FBgn0034521.1 1038 1128 +
Chr2	stalkie_big_nohaplotig	exon	14287621	14287725	100	-	.	Parent=FBgn0034521.1.mrna1;Target=FBgn0034521.1 933 1037 +
Chr2	stalkie_big_nohaplotig	exon	14288628	14288777	98	-	.	Parent=FBgn0034521.1.mrna1;Target=FBgn0034521.1 783 932 +
Chr2	stalkie_big_nohaplotig	exon	14288838	14289118	99	-	.	Parent=FBgn0034521.1.mrna1;Target=FBgn0034521.1 502 782 +
Chr2	stalkie_big_nohaplotig	exon	14289195	14289694	98	-	.	Parent=FBgn0034521.1.mrna1;Target=FBgn0034521.1 1 501 +
Chr2	stalkie_big_nohaplotig	CDS	14289601	14289692	.	-	0	Parent=FBgn0034521.1.mrna1
Chr2	gffcl	locus	14292793	14334058	.	-	.	ID=RLOC_00014956;geneIDs=FBgn0028622.1.path1,comp134905_c0_seq1.path1;transcripts=FBgn0028622.1.mrna1,comp134905_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14292793	14333980	.	-	.	ID=FBgn0028622.1.mrna1;geneID=FBgn0028622.1.path1;Name=FBgn0028622.1;Dir=sensecoverage=100.0;identity=98.5;matches=1403;mismatches=10;indels=12;unknowns=0;locus=RLOC_00014956
Chr2	stalkie_big_nohaplotig	exon	14292793	14293037	97	-	.	Parent=FBgn0028622.1.mrna1;Target=FBgn0028622.1 1169 1413 +
Chr2	stalkie_big_nohaplotig	exon	14293094	14293395	99	-	.	Parent=FBgn0028622.1.mrna1;Target=FBgn0028622.1 867 1168 +
Chr2	stalkie_big_nohaplotig	exon	14294765	14294995	99	-	.	Parent=FBgn0028622.1.mrna1;Target=FBgn0028622.1 636 866 +
Chr2	stalkie_big_nohaplotig	exon	14295596	14295804	100	-	.	Parent=FBgn0028622.1.mrna1;Target=FBgn0028622.1 427 635 +
Chr2	stalkie_big_nohaplotig	exon	14295888	14296114	100	-	.	Parent=FBgn0028622.1.mrna1;Target=FBgn0028622.1 200 426 +
Chr2	stalkie_big_nohaplotig	exon	14333493	14333614	99	-	.	Parent=FBgn0028622.1.mrna1;Target=FBgn0028622.1 78 199 +
Chr2	stalkie_big_nohaplotig	exon	14333892	14333980	86	-	.	Parent=FBgn0028622.1.mrna1;Target=FBgn0028622.1 1 77 +
Chr2	stalkie_big_nohaplotig	CDS	14292793	14293037	.	-	2	Parent=FBgn0028622.1.mrna1;Target=FBgn0028622.1 1169 1413 +
Chr2	stalkie_big_nohaplotig	CDS	14293094	14293395	.	-	1	Parent=FBgn0028622.1.mrna1;Target=FBgn0028622.1 867 1168 +
Chr2	stalkie_big_nohaplotig	CDS	14294765	14294995	.	-	1	Parent=FBgn0028622.1.mrna1;Target=FBgn0028622.1 636 866 +
Chr2	stalkie_big_nohaplotig	CDS	14295596	14295804	.	-	0	Parent=FBgn0028622.1.mrna1;Target=FBgn0028622.1 427 635 +
Chr2	stalkie_big_nohaplotig	CDS	14295888	14296114	.	-	2	Parent=FBgn0028622.1.mrna1;Target=FBgn0028622.1 200 426 +
Chr2	stalkie_big_nohaplotig	CDS	14333493	14333614	.	-	1	Parent=FBgn0028622.1.mrna1;Target=FBgn0028622.1 78 199 +
Chr2	stalkie_big_nohaplotig	CDS	14333892	14333980	.	-	0	Parent=FBgn0028622.1.mrna1;Target=FBgn0028622.1 1 77 +
Chr2	stalkie_big_nohaplotig	mRNA	14333626	14334058	.	-	.	ID=comp134905_c0_seq1.mrna1;geneID=comp134905_c0_seq1.path1;Name=comp134905_c0_seq1;Dir=sensecoverage=79.5;identity=99.7;matches=297;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014956
Chr2	stalkie_big_nohaplotig	exon	14333626	14333899	99	-	.	Parent=comp134905_c0_seq1.mrna1;Target=comp134905_c0_seq1 25 298 +
Chr2	stalkie_big_nohaplotig	exon	14334035	14334058	100	-	.	Parent=comp134905_c0_seq1.mrna1;Target=comp134905_c0_seq1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	14333851	14333899	.	-	1	Parent=comp134905_c0_seq1.mrna1;Target=comp134905_c0_seq1 25 73 +
Chr2	stalkie_big_nohaplotig	CDS	14334035	14334057	.	-	0	Parent=comp134905_c0_seq1.mrna1;Target=comp134905_c0_seq1 2 24 +
Chr2	gffcl	locus	14366359	14367867	.	-	.	ID=RLOC_00014957;geneIDs=comp153239_c0_seq1.path1;transcripts=comp153239_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14366359	14367867	.	-	.	ID=comp153239_c0_seq1.mrna1;geneID=comp153239_c0_seq1.path1;Name=comp153239_c0_seq1;Dir=antisensecoverage=98.4;identity=97.9;matches=1122;mismatches=19;indels=5;unknowns=0;locus=RLOC_00014957
Chr2	stalkie_big_nohaplotig	exon	14366359	14366831	96	-	.	Parent=comp153239_c0_seq1.mrna1;Target=comp153239_c0_seq1 20 497 -
Chr2	stalkie_big_nohaplotig	exon	14366901	14367015	98	-	.	Parent=comp153239_c0_seq1.mrna1;Target=comp153239_c0_seq1 498 612 -
Chr2	stalkie_big_nohaplotig	exon	14367079	14367285	98	-	.	Parent=comp153239_c0_seq1.mrna1;Target=comp153239_c0_seq1 613 819 -
Chr2	stalkie_big_nohaplotig	exon	14367522	14367867	99	-	.	Parent=comp153239_c0_seq1.mrna1;Target=comp153239_c0_seq1 820 1165 -
Chr2	stalkie_big_nohaplotig	CDS	14366664	14366831	.	-	0	Parent=comp153239_c0_seq1.mrna1;Target=comp153239_c0_seq1 330 497 .
Chr2	stalkie_big_nohaplotig	CDS	14366901	14367015	.	-	1	Parent=comp153239_c0_seq1.mrna1;Target=comp153239_c0_seq1 498 612 .
Chr2	stalkie_big_nohaplotig	CDS	14367079	14367285	.	-	1	Parent=comp153239_c0_seq1.mrna1;Target=comp153239_c0_seq1 613 819 .
Chr2	stalkie_big_nohaplotig	CDS	14367522	14367625	.	-	0	Parent=comp153239_c0_seq1.mrna1;Target=comp153239_c0_seq1 820 923 .
Chr2	gffcl	locus	14388628	14553460	.	+	.	ID=RLOC_00014958;geneIDs=FBgn0015907.path1;transcripts=FBgn0015907.mrna1,FBgn0015907.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14388628	14553460	.	+	.	ID=FBgn0015907.mrna1;geneID=FBgn0015907.path1;Name=FBgn0015907;Dir=sensecoverage=95.7;identity=99.6;matches=689;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014958
Chr2	stalkie_big_nohaplotig	exon	14388628	14388728	100	+	.	Parent=FBgn0015907.mrna1;Target=FBgn0015907 32 132 +
Chr2	stalkie_big_nohaplotig	exon	14388794	14388850	100	+	.	Parent=FBgn0015907.mrna1;Target=FBgn0015907 133 189 +
Chr2	stalkie_big_nohaplotig	exon	14390037	14390080	100	+	.	Parent=FBgn0015907.mrna1;Target=FBgn0015907 190 233 +
Chr2	stalkie_big_nohaplotig	exon	14391554	14391626	100	+	.	Parent=FBgn0015907.mrna1;Target=FBgn0015907 234 306 +
Chr2	stalkie_big_nohaplotig	exon	14391730	14391825	98	+	.	Parent=FBgn0015907.mrna1;Target=FBgn0015907 307 402 +
Chr2	stalkie_big_nohaplotig	exon	14551537	14551668	98	+	.	Parent=FBgn0015907.mrna1;Target=FBgn0015907 403 534 +
Chr2	stalkie_big_nohaplotig	exon	14551738	14552475	100	+	.	Parent=FBgn0015907.mrna1;Target=FBgn0015907 1 570 +
Chr2	stalkie_big_nohaplotig	exon	14552542	14552711	100	+	.	Parent=FBgn0015907.mrna1;Target=FBgn0015907 571 740 +
Chr2	stalkie_big_nohaplotig	exon	14553427	14553460	97	+	.	Parent=FBgn0015907.mrna1;Target=FBgn0015907 741 774 +
Chr2	stalkie_big_nohaplotig	CDS	14388630	14388728	100	+	0	Parent=FBgn0015907.mrna1;Target=FBgn0015907 34 132 +
Chr2	stalkie_big_nohaplotig	CDS	14388794	14388850	100	+	0	Parent=FBgn0015907.mrna1;Target=FBgn0015907 133 189 +
Chr2	stalkie_big_nohaplotig	CDS	14390037	14390080	100	+	0	Parent=FBgn0015907.mrna1;Target=FBgn0015907 190 233 +
Chr2	stalkie_big_nohaplotig	CDS	14391554	14391626	100	+	2	Parent=FBgn0015907.mrna1;Target=FBgn0015907 234 306 +
Chr2	stalkie_big_nohaplotig	CDS	14391730	14391825	98	+	0	Parent=FBgn0015907.mrna1;Target=FBgn0015907 307 402 +
Chr2	stalkie_big_nohaplotig	CDS	14551537	14551668	98	+	0	Parent=FBgn0015907.mrna1;Target=FBgn0015907 403 534 +
Chr2	stalkie_big_nohaplotig	CDS	14551738	14551926	100	+	0	Parent=FBgn0015907.mrna1;Target=FBgn0015907 535 723 +
Chr2	stalkie_big_nohaplotig	CDS	14551906	14552475	98	+	0	Parent=FBgn0015907.mrna1;Target=FBgn0015907 1 570 +
Chr2	stalkie_big_nohaplotig	CDS	14552542	14552711	100	+	0	Parent=FBgn0015907.mrna1;Target=FBgn0015907 571 740 +
Chr2	stalkie_big_nohaplotig	CDS	14553427	14553460	97	+	2	Parent=FBgn0015907.mrna1;Target=FBgn0015907 741 774 +
Chr2	stalkie_big_nohaplotig	mRNA	14551906	14553460	.	+	.	ID=FBgn0015907.mrna1;geneID=FBgn0015907.path1;Name=FBgn0015907;Dir=sensecoverage=100.0;identity=98.7;matches=764;mismatches=10;indels=0;unknowns=0;locus=RLOC_00014958
Chr2	stalkie_big_nohaplotig	exon	14551906	14553460	.	+	.	Parent=FBgn0015907.mrna1
Chr2	gffcl	locus	14427089	14427653	.	+	.	ID=RLOC_00014959;geneIDs=comp116460_c1_seq1.path1;transcripts=comp116460_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14427089	14427653	.	+	.	ID=comp116460_c1_seq1.mrna1;geneID=comp116460_c1_seq1.path1;Name=comp116460_c1_seq1;Dir=indeterminatecoverage=94.3;identity=99.6;matches=563;mismatches=2;indels=0;unknowns=0;Target=comp116460_c1_seq1 599 35 .;CDS_Target=comp116460_c1_seq1 293 36 .;locus=RLOC_00014959
Chr2	stalkie_big_nohaplotig	exon	14427089	14427653	99	+	.	Parent=comp116460_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	14427090	14427347	.	+	0	Parent=comp116460_c1_seq1.mrna1
Chr2	gffcl	locus	14430215	14459679	.	-	.	ID=RLOC_00014960;geneIDs=FBgn0016078.1.path1,comp153744_c0_seq1.path1;transcripts=comp153744_c0_seq1.mrna1,FBgn0016078.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14430215	14459679	.	-	.	ID=comp153744_c0_seq1.mrna1;geneID=comp153744_c0_seq1.path1;Name=comp153744_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=2263;mismatches=12;indels=4;unknowns=0;locus=RLOC_00014960
Chr2	stalkie_big_nohaplotig	exon	14430215	14431243	98	-	.	Parent=comp153744_c0_seq1.mrna1;Target=comp153744_c0_seq1 1248 2275 +
Chr2	stalkie_big_nohaplotig	exon	14436425	14436601	100	-	.	Parent=comp153744_c0_seq1.mrna1;Target=comp153744_c0_seq1 1071 1247 +
Chr2	stalkie_big_nohaplotig	exon	14436690	14436869	100	-	.	Parent=comp153744_c0_seq1.mrna1;Target=comp153744_c0_seq1 891 1070 +
Chr2	stalkie_big_nohaplotig	exon	14440826	14441044	99	-	.	Parent=comp153744_c0_seq1.mrna1;Target=comp153744_c0_seq1 672 890 +
Chr2	stalkie_big_nohaplotig	exon	14443253	14443404	99	-	.	Parent=comp153744_c0_seq1.mrna1;Target=comp153744_c0_seq1 520 671 +
Chr2	stalkie_big_nohaplotig	exon	14459158	14459679	99	-	.	Parent=comp153744_c0_seq1.mrna1;Target=comp153744_c0_seq1 1 519 +
Chr2	stalkie_big_nohaplotig	CDS	14431130	14431243	.	-	0	Parent=comp153744_c0_seq1.mrna1;Target=comp153744_c0_seq1 1248 1361 +
Chr2	stalkie_big_nohaplotig	CDS	14436425	14436601	.	-	0	Parent=comp153744_c0_seq1.mrna1;Target=comp153744_c0_seq1 1071 1247 +
Chr2	stalkie_big_nohaplotig	CDS	14436690	14436869	.	-	0	Parent=comp153744_c0_seq1.mrna1;Target=comp153744_c0_seq1 891 1070 +
Chr2	stalkie_big_nohaplotig	CDS	14440826	14441044	.	-	0	Parent=comp153744_c0_seq1.mrna1;Target=comp153744_c0_seq1 672 890 +
Chr2	stalkie_big_nohaplotig	CDS	14443253	14443404	.	-	2	Parent=comp153744_c0_seq1.mrna1;Target=comp153744_c0_seq1 520 671 +
Chr2	stalkie_big_nohaplotig	CDS	14459158	14459506	.	-	0	Parent=comp153744_c0_seq1.mrna1;Target=comp153744_c0_seq1 174 519 +
Chr2	stalkie_big_nohaplotig	mRNA	14435976	14459638	.	-	.	ID=FBgn0016078.1.mrna1;geneID=FBgn0016078.1.path1;Name=FBgn0016078.1;Dir=sensecoverage=100.0;identity=99.6;matches=1282;mismatches=2;indels=3;unknowns=0;locus=RLOC_00014960
Chr2	stalkie_big_nohaplotig	exon	14435976	14436053	100	-	.	Parent=FBgn0016078.1.mrna1;Target=FBgn0016078.1 1207 1284 +
Chr2	stalkie_big_nohaplotig	exon	14436425	14436601	100	-	.	Parent=FBgn0016078.1.mrna1;Target=FBgn0016078.1 1030 1206 +
Chr2	stalkie_big_nohaplotig	exon	14436690	14436869	100	-	.	Parent=FBgn0016078.1.mrna1;Target=FBgn0016078.1 850 1029 +
Chr2	stalkie_big_nohaplotig	exon	14440826	14441044	99	-	.	Parent=FBgn0016078.1.mrna1;Target=FBgn0016078.1 631 849 +
Chr2	stalkie_big_nohaplotig	exon	14443253	14443404	99	-	.	Parent=FBgn0016078.1.mrna1;Target=FBgn0016078.1 479 630 +
Chr2	stalkie_big_nohaplotig	exon	14459158	14459638	99	-	.	Parent=FBgn0016078.1.mrna1;Target=FBgn0016078.1 1 478 +
Chr2	stalkie_big_nohaplotig	CDS	14435976	14436053	.	-	0	Parent=FBgn0016078.1.mrna1;Target=FBgn0016078.1 1207 1284 +
Chr2	stalkie_big_nohaplotig	CDS	14436425	14436601	.	-	0	Parent=FBgn0016078.1.mrna1;Target=FBgn0016078.1 1030 1206 +
Chr2	stalkie_big_nohaplotig	CDS	14436690	14436869	.	-	0	Parent=FBgn0016078.1.mrna1;Target=FBgn0016078.1 850 1029 +
Chr2	stalkie_big_nohaplotig	CDS	14440826	14441044	.	-	0	Parent=FBgn0016078.1.mrna1;Target=FBgn0016078.1 631 849 +
Chr2	stalkie_big_nohaplotig	CDS	14443253	14443404	.	-	2	Parent=FBgn0016078.1.mrna1;Target=FBgn0016078.1 479 630 +
Chr2	stalkie_big_nohaplotig	CDS	14459158	14459638	.	-	0	Parent=FBgn0016078.1.mrna1;Target=FBgn0016078.1 1 478 +
Chr2	gffcl	locus	14478801	14487476	.	-	.	ID=RLOC_00014961;geneIDs=FBgn0016078.2.path1;transcripts=FBgn0016078.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14478801	14487476	.	-	.	ID=FBgn0016078.2.mrna1;geneID=FBgn0016078.2.path1;Name=FBgn0016078.2;Dir=sensecoverage=100.0;identity=99.5;matches=1072;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014961
Chr2	stalkie_big_nohaplotig	exon	14478801	14478815	100	-	.	Parent=FBgn0016078.2.mrna1;Target=FBgn0016078.2 1063 1077 +
Chr2	stalkie_big_nohaplotig	exon	14478944	14479120	100	-	.	Parent=FBgn0016078.2.mrna1;Target=FBgn0016078.2 886 1062 +
Chr2	stalkie_big_nohaplotig	exon	14479223	14479402	98	-	.	Parent=FBgn0016078.2.mrna1;Target=FBgn0016078.2 706 885 +
Chr2	stalkie_big_nohaplotig	exon	14480451	14480669	99	-	.	Parent=FBgn0016078.2.mrna1;Target=FBgn0016078.2 487 705 +
Chr2	stalkie_big_nohaplotig	exon	14481611	14481762	99	-	.	Parent=FBgn0016078.2.mrna1;Target=FBgn0016078.2 335 486 +
Chr2	stalkie_big_nohaplotig	exon	14487143	14487476	100	-	.	Parent=FBgn0016078.2.mrna1;Target=FBgn0016078.2 1 334 +
Chr2	stalkie_big_nohaplotig	CDS	14478801	14478815	.	-	0	Parent=FBgn0016078.2.mrna1;Target=FBgn0016078.2 1063 1077 +
Chr2	stalkie_big_nohaplotig	CDS	14478944	14479120	.	-	0	Parent=FBgn0016078.2.mrna1;Target=FBgn0016078.2 886 1062 +
Chr2	stalkie_big_nohaplotig	CDS	14479223	14479402	.	-	0	Parent=FBgn0016078.2.mrna1;Target=FBgn0016078.2 706 885 +
Chr2	stalkie_big_nohaplotig	CDS	14480451	14480669	.	-	0	Parent=FBgn0016078.2.mrna1;Target=FBgn0016078.2 487 705 +
Chr2	stalkie_big_nohaplotig	CDS	14481611	14481762	.	-	2	Parent=FBgn0016078.2.mrna1;Target=FBgn0016078.2 335 486 +
Chr2	stalkie_big_nohaplotig	CDS	14487143	14487476	.	-	0	Parent=FBgn0016078.2.mrna1;Target=FBgn0016078.2 1 334 +
Chr2	gffcl	locus	14511344	14513241	.	-	.	ID=RLOC_00014962;geneIDs=FBgn0034552.2.path1;transcripts=FBgn0034552.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14511344	14513241	.	-	.	ID=FBgn0034552.2.mrna1;geneID=FBgn0034552.2.path1;Name=FBgn0034552.2;Dir=sensecoverage=100.0;identity=98.3;matches=1631;mismatches=28;indels=0;unknowns=0;locus=RLOC_00014962
Chr2	stalkie_big_nohaplotig	exon	14511344	14512307	98	-	.	Parent=FBgn0034552.2.mrna1;Target=FBgn0034552.2 696 1659 +
Chr2	stalkie_big_nohaplotig	exon	14512409	14512528	97	-	.	Parent=FBgn0034552.2.mrna1;Target=FBgn0034552.2 576 695 +
Chr2	stalkie_big_nohaplotig	exon	14512597	14512795	100	-	.	Parent=FBgn0034552.2.mrna1;Target=FBgn0034552.2 377 575 +
Chr2	stalkie_big_nohaplotig	exon	14512866	14513241	98	-	.	Parent=FBgn0034552.2.mrna1;Target=FBgn0034552.2 1 376 +
Chr2	stalkie_big_nohaplotig	CDS	14511344	14512307	.	-	1	Parent=FBgn0034552.2.mrna1;Target=FBgn0034552.2 696 1659 +
Chr2	stalkie_big_nohaplotig	CDS	14512409	14512528	.	-	1	Parent=FBgn0034552.2.mrna1;Target=FBgn0034552.2 576 695 +
Chr2	stalkie_big_nohaplotig	CDS	14512597	14512795	.	-	2	Parent=FBgn0034552.2.mrna1;Target=FBgn0034552.2 377 575 +
Chr2	stalkie_big_nohaplotig	CDS	14512866	14513241	.	-	0	Parent=FBgn0034552.2.mrna1;Target=FBgn0034552.2 1 376 +
Chr2	gffcl	locus	14519772	14521988	.	+	.	ID=RLOC_00014963;geneIDs=comp135304_c0_seq1.path1;transcripts=comp135304_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14519772	14521988	.	+	.	ID=comp135304_c0_seq1.mrna1;geneID=comp135304_c0_seq1.path1;Name=comp135304_c0_seq1;Dir=sensecoverage=100.0;identity=97.4;matches=570;mismatches=1;indels=14;unknowns=0;Target=comp135304_c0_seq1 1 36 +;locus=RLOC_00014963
Chr2	stalkie_big_nohaplotig	exon	14519772	14520267	97	+	.	Parent=comp135304_c0_seq1.mrna1;Target=comp135304_c0_seq1 1 503 +
Chr2	stalkie_big_nohaplotig	exon	14521911	14521988	97	+	.	Parent=comp135304_c0_seq1.mrna1;Target=comp135304_c0_seq1 504 582 +
Chr2	stalkie_big_nohaplotig	CDS	14519772	14519807	.	+	0	Parent=comp135304_c0_seq1.mrna1
Chr2	gffcl	locus	14520900	14521194	.	+	.	ID=RLOC_00014964;geneIDs=comp149946_c2_seq1.path1;transcripts=comp149946_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14520900	14521194	.	+	.	ID=comp149946_c2_seq1.mrna1;geneID=comp149946_c2_seq1.path1;Name=comp149946_c2_seq1;Dir=indeterminatecoverage=18.6;identity=99.7;matches=295;mismatches=0;indels=1;unknowns=0;Target=comp149946_c2_seq1 1591 1296 .;CDS_Target=comp149946_c2_seq1 1355 1296 .;locus=RLOC_00014964
Chr2	stalkie_big_nohaplotig	exon	14520900	14521194	99	+	.	Parent=comp149946_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	14520900	14520958	.	+	0	Parent=comp149946_c2_seq1.mrna1
Chr2	gffcl	locus	14555886	14556183	.	-	.	ID=RLOC_00014965;geneIDs=comp557458_c0_seq1.path1;transcripts=comp557458_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14555886	14556183	.	-	.	ID=comp557458_c0_seq1.mrna1;geneID=comp557458_c0_seq1.path1;Name=comp557458_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=297;mismatches=0;indels=2;unknowns=0;Target=comp557458_c0_seq1 298 1 .;CDS_Target=comp557458_c0_seq1 43 2 .;locus=RLOC_00014965
Chr2	stalkie_big_nohaplotig	exon	14555886	14556183	99	-	.	Parent=comp557458_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	14556142	14556182	.	-	0	Parent=comp557458_c0_seq1.mrna1
Chr2	gffcl	locus	14556519	14573157	.	-	.	ID=RLOC_00014966;geneIDs=FBgn0050147.1.path1;transcripts=FBgn0050147.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14556519	14573157	.	-	.	ID=FBgn0050147.1.mrna1;geneID=FBgn0050147.1.path1;Name=FBgn0050147.1;Dir=sensecoverage=100.0;identity=99.6;matches=2528;mismatches=10;indels=0;unknowns=0;locus=RLOC_00014966
Chr2	stalkie_big_nohaplotig	exon	14556519	14556660	100	-	.	Parent=FBgn0050147.1.mrna1;Target=FBgn0050147.1 2397 2538 +
Chr2	stalkie_big_nohaplotig	exon	14556897	14557060	100	-	.	Parent=FBgn0050147.1.mrna1;Target=FBgn0050147.1 2233 2396 +
Chr2	stalkie_big_nohaplotig	exon	14557123	14557236	100	-	.	Parent=FBgn0050147.1.mrna1;Target=FBgn0050147.1 2119 2232 +
Chr2	stalkie_big_nohaplotig	exon	14557296	14557570	99	-	.	Parent=FBgn0050147.1.mrna1;Target=FBgn0050147.1 1844 2118 +
Chr2	stalkie_big_nohaplotig	exon	14557628	14557836	100	-	.	Parent=FBgn0050147.1.mrna1;Target=FBgn0050147.1 1635 1843 +
Chr2	stalkie_big_nohaplotig	exon	14557897	14558339	98	-	.	Parent=FBgn0050147.1.mrna1;Target=FBgn0050147.1 1192 1634 +
Chr2	stalkie_big_nohaplotig	exon	14558403	14558954	99	-	.	Parent=FBgn0050147.1.mrna1;Target=FBgn0050147.1 640 1191 +
Chr2	stalkie_big_nohaplotig	exon	14568961	14569154	100	-	.	Parent=FBgn0050147.1.mrna1;Target=FBgn0050147.1 446 639 +
Chr2	stalkie_big_nohaplotig	exon	14569326	14569467	100	-	.	Parent=FBgn0050147.1.mrna1;Target=FBgn0050147.1 304 445 +
Chr2	stalkie_big_nohaplotig	exon	14572855	14573157	100	-	.	Parent=FBgn0050147.1.mrna1;Target=FBgn0050147.1 1 303 +
Chr2	stalkie_big_nohaplotig	CDS	14556519	14556660	.	-	1	Parent=FBgn0050147.1.mrna1;Target=FBgn0050147.1 2397 2538 +
Chr2	stalkie_big_nohaplotig	CDS	14556897	14557060	.	-	0	Parent=FBgn0050147.1.mrna1;Target=FBgn0050147.1 2233 2396 +
Chr2	stalkie_big_nohaplotig	CDS	14557123	14557236	.	-	0	Parent=FBgn0050147.1.mrna1;Target=FBgn0050147.1 2119 2232 +
Chr2	stalkie_big_nohaplotig	CDS	14557296	14557570	.	-	2	Parent=FBgn0050147.1.mrna1;Target=FBgn0050147.1 1844 2118 +
Chr2	stalkie_big_nohaplotig	CDS	14557628	14557836	.	-	1	Parent=FBgn0050147.1.mrna1;Target=FBgn0050147.1 1635 1843 +
Chr2	stalkie_big_nohaplotig	CDS	14557897	14558339	.	-	0	Parent=FBgn0050147.1.mrna1;Target=FBgn0050147.1 1192 1634 +
Chr2	stalkie_big_nohaplotig	CDS	14558403	14558954	.	-	0	Parent=FBgn0050147.1.mrna1;Target=FBgn0050147.1 640 1191 +
Chr2	stalkie_big_nohaplotig	CDS	14568961	14569154	.	-	2	Parent=FBgn0050147.1.mrna1;Target=FBgn0050147.1 446 639 +
Chr2	stalkie_big_nohaplotig	CDS	14569326	14569467	.	-	0	Parent=FBgn0050147.1.mrna1;Target=FBgn0050147.1 304 445 +
Chr2	stalkie_big_nohaplotig	CDS	14572855	14573157	.	-	0	Parent=FBgn0050147.1.mrna1;Target=FBgn0050147.1 1 303 +
Chr2	gffcl	locus	14587755	14595786	.	+	.	ID=RLOC_00014967;geneIDs=comp156377_c0_seq1.path1;transcripts=comp156377_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14587755	14595786	.	+	.	ID=comp156377_c0_seq1.mrna1;geneID=comp156377_c0_seq1.path1;Name=comp156377_c0_seq1;Dir=indeterminatecoverage=82.8;identity=95.0;matches=783;mismatches=32;indels=9;unknowns=0;Target=comp156377_c0_seq1 845 735 .;locus=RLOC_00014967
Chr2	stalkie_big_nohaplotig	exon	14587755	14587763	100	+	.	Parent=comp156377_c0_seq1.mrna1;Target=comp156377_c0_seq1 184 176 .
Chr2	stalkie_big_nohaplotig	exon	14594585	14594635	66	+	.	Parent=comp156377_c0_seq1.mrna1;Target=comp156377_c0_seq1 254 211 .
Chr2	stalkie_big_nohaplotig	exon	14595024	14595786	96	+	.	Parent=comp156377_c0_seq1.mrna1;Target=comp156377_c0_seq1 1015 255 .
Chr2	stalkie_big_nohaplotig	CDS	14595506	14595616	.	+	0	Parent=comp156377_c0_seq1.mrna1
Chr2	gffcl	locus	14620150	14622203	.	+	.	ID=RLOC_00014969;geneIDs=FBgn0034141.1.path1;transcripts=FBgn0034141.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14620150	14622203	.	+	.	ID=FBgn0034141.1.mrna1;geneID=FBgn0034141.1.path1;Name=FBgn0034141.1;Dir=sensecoverage=100.0;identity=99.3;matches=1492;mismatches=11;indels=0;unknowns=0;locus=RLOC_00014969
Chr2	stalkie_big_nohaplotig	exon	14620150	14620283	100	+	.	Parent=FBgn0034141.1.mrna1;Target=FBgn0034141.1 1 134 +
Chr2	stalkie_big_nohaplotig	exon	14620655	14621123	99	+	.	Parent=FBgn0034141.1.mrna1;Target=FBgn0034141.1 135 603 +
Chr2	stalkie_big_nohaplotig	exon	14621186	14621365	98	+	.	Parent=FBgn0034141.1.mrna1;Target=FBgn0034141.1 604 783 +
Chr2	stalkie_big_nohaplotig	exon	14621420	14621915	99	+	.	Parent=FBgn0034141.1.mrna1;Target=FBgn0034141.1 784 1279 +
Chr2	stalkie_big_nohaplotig	exon	14621980	14622203	100	+	.	Parent=FBgn0034141.1.mrna1;Target=FBgn0034141.1 1280 1503 +
Chr2	stalkie_big_nohaplotig	CDS	14620150	14620283	.	+	0	Parent=FBgn0034141.1.mrna1;Target=FBgn0034141.1 1 134 +
Chr2	stalkie_big_nohaplotig	CDS	14620655	14621123	.	+	1	Parent=FBgn0034141.1.mrna1;Target=FBgn0034141.1 135 603 +
Chr2	stalkie_big_nohaplotig	CDS	14621186	14621365	.	+	0	Parent=FBgn0034141.1.mrna1;Target=FBgn0034141.1 604 783 +
Chr2	stalkie_big_nohaplotig	CDS	14621420	14621915	.	+	0	Parent=FBgn0034141.1.mrna1;Target=FBgn0034141.1 784 1279 +
Chr2	stalkie_big_nohaplotig	CDS	14621980	14622203	.	+	2	Parent=FBgn0034141.1.mrna1;Target=FBgn0034141.1 1280 1503 +
Chr2	gffcl	locus	14626551	14627734	.	-	.	ID=RLOC_00014970;geneIDs=comp78459_c0_seq1.path1;transcripts=comp78459_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14626551	14627734	.	-	.	ID=comp78459_c0_seq1.mrna1;geneID=comp78459_c0_seq1.path1;Name=comp78459_c0_seq1;Dir=antisensecoverage=100.0;identity=97.9;matches=368;mismatches=2;indels=6;unknowns=0;Target=comp78459_c0_seq1 276 368 .;locus=RLOC_00014970
Chr2	stalkie_big_nohaplotig	exon	14626551	14626574	100	-	.	Parent=comp78459_c0_seq1.mrna1;Target=comp78459_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	exon	14627383	14627734	97	-	.	Parent=comp78459_c0_seq1.mrna1;Target=comp78459_c0_seq1 25 370 -
Chr2	stalkie_big_nohaplotig	CDS	14627639	14627732	.	-	0	Parent=comp78459_c0_seq1.mrna1
Chr2	gffcl	locus	14629412	14674120	.	-	.	ID=RLOC_00014971;geneIDs=FBgn0005634.1.path1,comp117686_c0_seq1.path1;transcripts=FBgn0005634.1.mrna1,comp117686_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14629412	14674120	.	-	.	ID=FBgn0005634.1.mrna1;geneID=FBgn0005634.1.path1;Name=FBgn0005634.1;Dir=sensecoverage=100.0;identity=99.8;matches=4213;mismatches=7;indels=1;unknowns=0;locus=RLOC_00014971
Chr2	stalkie_big_nohaplotig	exon	14629412	14629818	99	-	.	Parent=FBgn0005634.1.mrna1;Target=FBgn0005634.1 3814 4221 +
Chr2	stalkie_big_nohaplotig	exon	14630151	14630455	99	-	.	Parent=FBgn0005634.1.mrna1;Target=FBgn0005634.1 3509 3813 +
Chr2	stalkie_big_nohaplotig	exon	14630527	14633266	99	-	.	Parent=FBgn0005634.1.mrna1;Target=FBgn0005634.1 769 3508 +
Chr2	stalkie_big_nohaplotig	exon	14633331	14633423	100	-	.	Parent=FBgn0005634.1.mrna1;Target=FBgn0005634.1 676 768 +
Chr2	stalkie_big_nohaplotig	exon	14635118	14635135	100	-	.	Parent=FBgn0005634.1.mrna1;Target=FBgn0005634.1 658 675 +
Chr2	stalkie_big_nohaplotig	exon	14641534	14641655	100	-	.	Parent=FBgn0005634.1.mrna1;Target=FBgn0005634.1 536 657 +
Chr2	stalkie_big_nohaplotig	exon	14646335	14646491	100	-	.	Parent=FBgn0005634.1.mrna1;Target=FBgn0005634.1 379 535 +
Chr2	stalkie_big_nohaplotig	exon	14657774	14657989	100	-	.	Parent=FBgn0005634.1.mrna1;Target=FBgn0005634.1 163 378 +
Chr2	stalkie_big_nohaplotig	exon	14673959	14674120	100	-	.	Parent=FBgn0005634.1.mrna1;Target=FBgn0005634.1 1 162 +
Chr2	stalkie_big_nohaplotig	CDS	14629412	14629818	.	-	0	Parent=FBgn0005634.1.mrna1;Target=FBgn0005634.1 3814 4221 +
Chr2	stalkie_big_nohaplotig	CDS	14630151	14630455	.	-	2	Parent=FBgn0005634.1.mrna1;Target=FBgn0005634.1 3509 3813 +
Chr2	stalkie_big_nohaplotig	CDS	14630527	14633266	.	-	0	Parent=FBgn0005634.1.mrna1;Target=FBgn0005634.1 769 3508 +
Chr2	stalkie_big_nohaplotig	CDS	14633331	14633423	.	-	0	Parent=FBgn0005634.1.mrna1;Target=FBgn0005634.1 676 768 +
Chr2	stalkie_big_nohaplotig	CDS	14635118	14635135	.	-	0	Parent=FBgn0005634.1.mrna1;Target=FBgn0005634.1 658 675 +
Chr2	stalkie_big_nohaplotig	CDS	14641534	14641655	.	-	2	Parent=FBgn0005634.1.mrna1;Target=FBgn0005634.1 536 657 +
Chr2	stalkie_big_nohaplotig	CDS	14646335	14646491	.	-	0	Parent=FBgn0005634.1.mrna1;Target=FBgn0005634.1 379 535 +
Chr2	stalkie_big_nohaplotig	CDS	14657774	14657989	.	-	0	Parent=FBgn0005634.1.mrna1;Target=FBgn0005634.1 163 378 +
Chr2	stalkie_big_nohaplotig	CDS	14673959	14674120	.	-	0	Parent=FBgn0005634.1.mrna1;Target=FBgn0005634.1 1 162 +
Chr2	stalkie_big_nohaplotig	mRNA	14634738	14635136	.	-	.	ID=comp117686_c0_seq1.mrna1;geneID=comp117686_c0_seq1.path1;Name=comp117686_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.5;matches=397;mismatches=2;indels=0;unknowns=0;Target=comp117686_c0_seq1 403 5 .;CDS_Target=comp117686_c0_seq1 122 6 .;locus=RLOC_00014971
Chr2	stalkie_big_nohaplotig	exon	14634738	14635136	99	-	.	Parent=comp117686_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	14635019	14635135	.	-	0	Parent=comp117686_c0_seq1.mrna1
Chr2	gffcl	locus	14664678	14667321	.	+	.	ID=RLOC_00014972;geneIDs=ORF302.path2,comp160431_c0_seq1.path6;transcripts=ORF302.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	14664678	14666770	.	+	.	ID=ORF302.mrna2;geneID=ORF302.path2;Name=ORF302;Dir=indeterminatecoverage=100.0;identity=99.1;matches=2075;mismatches=18;indels=1;unknowns=0;Target=ORF302 2094 1 .;CDS_Target=ORF302 83 3 .;locus=RLOC_00014972
Chr2	stalkie_big_nohaplotig	exon	14664678	14666770	99	+	.	Parent=ORF302.mrna2
Chr2	stalkie_big_nohaplotig	CDS	14664680	14664759	.	+	0	Parent=ORF302.mrna2
Chr2	gffcl	locus	14676900	14678212	.	+	.	ID=RLOC_00014973;geneIDs=FBgn0034946.1.path1;transcripts=FBgn0034946.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14676900	14678212	.	+	.	ID=FBgn0034946.1.mrna1;geneID=FBgn0034946.1.path1;Name=FBgn0034946.1;Dir=sensecoverage=100.0;identity=99.6;matches=1168;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014973
Chr2	stalkie_big_nohaplotig	exon	14676900	14677386	99	+	.	Parent=FBgn0034946.1.mrna1;Target=FBgn0034946.1 1 487 +
Chr2	stalkie_big_nohaplotig	exon	14677454	14678047	99	+	.	Parent=FBgn0034946.1.mrna1;Target=FBgn0034946.1 488 1081 +
Chr2	stalkie_big_nohaplotig	exon	14678121	14678212	100	+	.	Parent=FBgn0034946.1.mrna1;Target=FBgn0034946.1 1082 1173 +
Chr2	stalkie_big_nohaplotig	CDS	14676900	14677386	.	+	0	Parent=FBgn0034946.1.mrna1;Target=FBgn0034946.1 1 487 +
Chr2	stalkie_big_nohaplotig	CDS	14677454	14678047	.	+	2	Parent=FBgn0034946.1.mrna1;Target=FBgn0034946.1 488 1081 +
Chr2	stalkie_big_nohaplotig	CDS	14678121	14678212	.	+	2	Parent=FBgn0034946.1.mrna1;Target=FBgn0034946.1 1082 1173 +
Chr2	gffcl	locus	14679758	14680578	.	-	.	ID=RLOC_00014974;geneIDs=FBgn0003008.1.path1;transcripts=FBgn0003008.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14679758	14680578	.	-	.	ID=FBgn0003008.1.mrna1;geneID=FBgn0003008.1.path1;Name=FBgn0003008.1;Dir=sensecoverage=100.0;identity=99.7;matches=604;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014974
Chr2	stalkie_big_nohaplotig	exon	14679758	14679877	100	-	.	Parent=FBgn0003008.1.mrna1;Target=FBgn0003008.1 487 606 +
Chr2	stalkie_big_nohaplotig	exon	14679952	14680243	99	-	.	Parent=FBgn0003008.1.mrna1;Target=FBgn0003008.1 195 486 +
Chr2	stalkie_big_nohaplotig	exon	14680304	14680395	98	-	.	Parent=FBgn0003008.1.mrna1;Target=FBgn0003008.1 103 194 +
Chr2	stalkie_big_nohaplotig	exon	14680477	14680578	100	-	.	Parent=FBgn0003008.1.mrna1;Target=FBgn0003008.1 1 102 +
Chr2	stalkie_big_nohaplotig	CDS	14679758	14679877	.	-	0	Parent=FBgn0003008.1.mrna1;Target=FBgn0003008.1 487 606 +
Chr2	stalkie_big_nohaplotig	CDS	14679952	14680243	.	-	1	Parent=FBgn0003008.1.mrna1;Target=FBgn0003008.1 195 486 +
Chr2	stalkie_big_nohaplotig	CDS	14680304	14680395	.	-	0	Parent=FBgn0003008.1.mrna1;Target=FBgn0003008.1 103 194 +
Chr2	stalkie_big_nohaplotig	CDS	14680477	14680578	.	-	0	Parent=FBgn0003008.1.mrna1;Target=FBgn0003008.1 1 102 +
Chr2	gffcl	locus	14681431	14681969	.	+	.	ID=RLOC_00014975;geneIDs=FBgn0085242.1.path1;transcripts=FBgn0085242.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14681431	14681969	.	+	.	ID=FBgn0085242.1.mrna1;geneID=FBgn0085242.1.path1;Name=FBgn0085242.1;Dir=sensecoverage=99.8;identity=98.8;matches=417;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014975
Chr2	stalkie_big_nohaplotig	exon	14681431	14681474	97	+	.	Parent=FBgn0085242.1.mrna1;Target=FBgn0085242.1 1 44 +
Chr2	stalkie_big_nohaplotig	exon	14681534	14681624	100	+	.	Parent=FBgn0085242.1.mrna1;Target=FBgn0085242.1 45 135 +
Chr2	stalkie_big_nohaplotig	exon	14681683	14681969	98	+	.	Parent=FBgn0085242.1.mrna1;Target=FBgn0085242.1 136 422 +
Chr2	stalkie_big_nohaplotig	CDS	14681431	14681474	.	+	0	Parent=FBgn0085242.1.mrna1;Target=FBgn0085242.1 1 44 +
Chr2	stalkie_big_nohaplotig	CDS	14681534	14681624	.	+	1	Parent=FBgn0085242.1.mrna1;Target=FBgn0085242.1 45 135 +
Chr2	stalkie_big_nohaplotig	CDS	14681683	14681967	.	+	0	Parent=FBgn0085242.1.mrna1;Target=FBgn0085242.1 136 420 +
Chr2	gffcl	locus	14682304	14682619	.	+	.	ID=RLOC_00014976;geneIDs=FBgn0040007.1.path1;transcripts=FBgn0040007.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14682304	14682619	.	+	.	ID=FBgn0040007.1.mrna1;geneID=FBgn0040007.1.path1;Name=FBgn0040007.1;Dir=sensecoverage=100.0;identity=99.2;matches=244;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014976
Chr2	stalkie_big_nohaplotig	exon	14682304	14682339	100	+	.	Parent=FBgn0040007.1.mrna1;Target=FBgn0040007.1 1 36 +
Chr2	stalkie_big_nohaplotig	exon	14682410	14682619	99	+	.	Parent=FBgn0040007.1.mrna1;Target=FBgn0040007.1 37 246 +
Chr2	stalkie_big_nohaplotig	CDS	14682304	14682339	.	+	0	Parent=FBgn0040007.1.mrna1;Target=FBgn0040007.1 1 36 +
Chr2	stalkie_big_nohaplotig	CDS	14682410	14682619	.	+	0	Parent=FBgn0040007.1.mrna1;Target=FBgn0040007.1 37 246 +
Chr2	gffcl	locus	14683062	14684480	.	-	.	ID=RLOC_00014977;geneIDs=comp158487_c0_seq1.path1;transcripts=comp158487_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14683062	14684480	.	-	.	ID=comp158487_c0_seq1.mrna1;geneID=comp158487_c0_seq1.path1;Name=comp158487_c0_seq1;Dir=sensecoverage=99.3;identity=98.1;matches=1330;mismatches=23;indels=3;unknowns=0;Target=comp158487_c0_seq1 174 248 +;locus=RLOC_00014977
Chr2	stalkie_big_nohaplotig	exon	14683062	14683836	97	-	.	Parent=comp158487_c0_seq1.mrna1;Target=comp158487_c0_seq1 590 1364 +
Chr2	stalkie_big_nohaplotig	exon	14683902	14684480	98	-	.	Parent=comp158487_c0_seq1.mrna1;Target=comp158487_c0_seq1 10 589 +
Chr2	stalkie_big_nohaplotig	CDS	14684242	14684315	.	-	0	Parent=comp158487_c0_seq1.mrna1
Chr2	gffcl	locus	14686439	14699787	.	-	.	ID=RLOC_00014978;geneIDs=CPIJ001903.1.path1;transcripts=CPIJ001903.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14686439	14699787	.	-	.	ID=CPIJ001903.1.mrna1;geneID=CPIJ001903.1.path1;Name=CPIJ001903.1;Dir=sensecoverage=100.0;identity=99.1;matches=6122;mismatches=51;indels=7;unknowns=0;Target=CPIJ001903.1 3 95 +;locus=RLOC_00014978
Chr2	stalkie_big_nohaplotig	exon	14686439	14687031	99	-	.	Parent=CPIJ001903.1.mrna1;Target=CPIJ001903.1 5582 6174 +
Chr2	stalkie_big_nohaplotig	exon	14687115	14687307	98	-	.	Parent=CPIJ001903.1.mrna1;Target=CPIJ001903.1 5389 5581 +
Chr2	stalkie_big_nohaplotig	exon	14687372	14689844	98	-	.	Parent=CPIJ001903.1.mrna1;Target=CPIJ001903.1 2922 5388 +
Chr2	stalkie_big_nohaplotig	exon	14696806	14697032	100	-	.	Parent=CPIJ001903.1.mrna1;Target=CPIJ001903.1 2695 2921 +
Chr2	stalkie_big_nohaplotig	exon	14697095	14699787	99	-	.	Parent=CPIJ001903.1.mrna1;Target=CPIJ001903.1 1 2694 +
Chr2	stalkie_big_nohaplotig	CDS	14699694	14699785	.	-	0	Parent=CPIJ001903.1.mrna1
Chr2	gffcl	locus	14702566	14704082	.	-	.	ID=RLOC_00014979;geneIDs=comp154463_c0_seq1.path1;transcripts=comp154463_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14702566	14704082	.	-	.	ID=comp154463_c0_seq1.mrna1;geneID=comp154463_c0_seq1.path1;Name=comp154463_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=1337;mismatches=8;indels=1;unknowns=0;locus=RLOC_00014979
Chr2	stalkie_big_nohaplotig	exon	14702566	14702845	99	-	.	Parent=comp154463_c0_seq1.mrna1;Target=comp154463_c0_seq1 1140 1419 +
Chr2	stalkie_big_nohaplotig	exon	14702915	14703094	98	-	.	Parent=comp154463_c0_seq1.mrna1;Target=comp154463_c0_seq1 960 1139 +
Chr2	stalkie_big_nohaplotig	exon	14703097	14703316	98	-	.	Parent=comp154463_c0_seq1.mrna1;Target=comp154463_c0_seq1 667 885 +
Chr2	stalkie_big_nohaplotig	exon	14703417	14704082	99	-	.	Parent=comp154463_c0_seq1.mrna1;Target=comp154463_c0_seq1 1 666 +
Chr2	stalkie_big_nohaplotig	CDS	14703226	14703316	.	-	1	Parent=comp154463_c0_seq1.mrna1;Target=comp154463_c0_seq1 667 757 +
Chr2	stalkie_big_nohaplotig	CDS	14703417	14703697	.	-	0	Parent=comp154463_c0_seq1.mrna1;Target=comp154463_c0_seq1 386 666 +
Chr2	gffcl	locus	14723373	14810444	.	+	.	ID=RLOC_00014980;geneIDs=FBgn0087011.1.path1,comp140576_c0_seq1.path1;transcripts=comp140576_c0_seq1.mrna1,FBgn0087011.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14723373	14727480	.	+	.	ID=comp140576_c0_seq1.mrna1;geneID=comp140576_c0_seq1.path1;Name=comp140576_c0_seq1;Dir=antisensecoverage=100.0;identity=98.2;matches=269;mismatches=2;indels=3;unknowns=0;locus=RLOC_00014980
Chr2	stalkie_big_nohaplotig	exon	14723373	14723498	96	+	.	Parent=comp140576_c0_seq1.mrna1;Target=comp140576_c0_seq1 146 274 -
Chr2	stalkie_big_nohaplotig	exon	14727336	14727480	100	+	.	Parent=comp140576_c0_seq1.mrna1;Target=comp140576_c0_seq1 1 145 -
Chr2	stalkie_big_nohaplotig	CDS	14723374	14723498	.	+	0	Parent=comp140576_c0_seq1.mrna1;Target=comp140576_c0_seq1 146 273 .
Chr2	stalkie_big_nohaplotig	CDS	14727336	14727342	.	+	1	Parent=comp140576_c0_seq1.mrna1;Target=comp140576_c0_seq1 139 145 .
Chr2	stalkie_big_nohaplotig	mRNA	14727460	14810444	.	+	.	ID=FBgn0087011.1.mrna1;geneID=FBgn0087011.1.path1;Name=FBgn0087011.1;Dir=sensecoverage=99.0;identity=99.8;matches=2487;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014980
Chr2	stalkie_big_nohaplotig	exon	14727460	14727884	100	+	.	Parent=FBgn0087011.1.mrna1;Target=FBgn0087011.1 25 449 +
Chr2	stalkie_big_nohaplotig	exon	14802474	14803466	99	+	.	Parent=FBgn0087011.1.mrna1;Target=FBgn0087011.1 450 1442 +
Chr2	stalkie_big_nohaplotig	exon	14803527	14803905	99	+	.	Parent=FBgn0087011.1.mrna1;Target=FBgn0087011.1 1443 1821 +
Chr2	stalkie_big_nohaplotig	exon	14809515	14809646	100	+	.	Parent=FBgn0087011.1.mrna1;Target=FBgn0087011.1 1822 1953 +
Chr2	stalkie_big_nohaplotig	exon	14809714	14809901	100	+	.	Parent=FBgn0087011.1.mrna1;Target=FBgn0087011.1 1954 2141 +
Chr2	stalkie_big_nohaplotig	exon	14810012	14810198	100	+	.	Parent=FBgn0087011.1.mrna1;Target=FBgn0087011.1 2142 2328 +
Chr2	stalkie_big_nohaplotig	exon	14810256	14810444	100	+	.	Parent=FBgn0087011.1.mrna1;Target=FBgn0087011.1 2329 2517 +
Chr2	stalkie_big_nohaplotig	CDS	14727460	14727884	.	+	0	Parent=FBgn0087011.1.mrna1;Target=FBgn0087011.1 25 449 +
Chr2	stalkie_big_nohaplotig	CDS	14802474	14803466	.	+	1	Parent=FBgn0087011.1.mrna1;Target=FBgn0087011.1 450 1442 +
Chr2	stalkie_big_nohaplotig	CDS	14803527	14803905	.	+	1	Parent=FBgn0087011.1.mrna1;Target=FBgn0087011.1 1443 1821 +
Chr2	stalkie_big_nohaplotig	CDS	14809515	14809646	.	+	0	Parent=FBgn0087011.1.mrna1;Target=FBgn0087011.1 1822 1953 +
Chr2	stalkie_big_nohaplotig	CDS	14809714	14809901	.	+	0	Parent=FBgn0087011.1.mrna1;Target=FBgn0087011.1 1954 2141 +
Chr2	stalkie_big_nohaplotig	CDS	14810012	14810198	.	+	1	Parent=FBgn0087011.1.mrna1;Target=FBgn0087011.1 2142 2328 +
Chr2	stalkie_big_nohaplotig	CDS	14810256	14810444	.	+	0	Parent=FBgn0087011.1.mrna1;Target=FBgn0087011.1 2329 2517 +
Chr2	gffcl	locus	14748498	14749314	.	+	.	ID=RLOC_00014981;geneIDs=comp118385_c0_seq1.path2;transcripts=comp118385_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	14748498	14749314	.	+	.	ID=comp118385_c0_seq1.mrna2;geneID=comp118385_c0_seq1.path2;Name=comp118385_c0_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=690;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014981
Chr2	stalkie_big_nohaplotig	exon	14748498	14748588	97	+	.	Parent=comp118385_c0_seq1.mrna2;Target=comp118385_c0_seq1 606 696 -
Chr2	stalkie_big_nohaplotig	exon	14748654	14748809	98	+	.	Parent=comp118385_c0_seq1.mrna2;Target=comp118385_c0_seq1 450 605 -
Chr2	stalkie_big_nohaplotig	exon	14748866	14749314	99	+	.	Parent=comp118385_c0_seq1.mrna2;Target=comp118385_c0_seq1 1 449 -
Chr2	stalkie_big_nohaplotig	CDS	14748499	14748588	.	+	0	Parent=comp118385_c0_seq1.mrna2;Target=comp118385_c0_seq1 606 695 .
Chr2	stalkie_big_nohaplotig	CDS	14748654	14748809	.	+	0	Parent=comp118385_c0_seq1.mrna2;Target=comp118385_c0_seq1 450 605 .
Chr2	stalkie_big_nohaplotig	CDS	14748866	14749204	.	+	0	Parent=comp118385_c0_seq1.mrna2;Target=comp118385_c0_seq1 111 449 .
Chr2	gffcl	locus	14772854	14773933	.	+	.	ID=RLOC_00014982;geneIDs=ORF1499.path1;transcripts=ORF1499.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14772854	14773933	.	+	.	ID=ORF1499.mrna1;geneID=ORF1499.path1;Name=ORF1499;Dir=indeterminatecoverage=100.0;identity=98.1;matches=1059;mismatches=21;indels=0;unknowns=0;Target=ORF1499 1080 1 .;locus=RLOC_00014982
Chr2	stalkie_big_nohaplotig	exon	14772854	14773933	98	+	.	Parent=ORF1499.mrna1
Chr2	stalkie_big_nohaplotig	CDS	14772854	14773933	.	+	0	Parent=ORF1499.mrna1
Chr2	gffcl	locus	14806974	14808722	.	-	.	ID=RLOC_00014983;geneIDs=FBgn0051139.1.path1;transcripts=FBgn0051139.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14806974	14808722	.	-	.	ID=FBgn0051139.1.mrna1;geneID=FBgn0051139.1.path1;Name=FBgn0051139.1;Dir=sensecoverage=100.0;identity=99.7;matches=1544;mismatches=4;indels=0;unknowns=0;locus=RLOC_00014983
Chr2	stalkie_big_nohaplotig	exon	14806974	14807081	98	-	.	Parent=FBgn0051139.1.mrna1;Target=FBgn0051139.1 1441 1548 +
Chr2	stalkie_big_nohaplotig	exon	14807162	14807461	99	-	.	Parent=FBgn0051139.1.mrna1;Target=FBgn0051139.1 1141 1440 +
Chr2	stalkie_big_nohaplotig	exon	14807530	14808445	100	-	.	Parent=FBgn0051139.1.mrna1;Target=FBgn0051139.1 225 1140 +
Chr2	stalkie_big_nohaplotig	exon	14808499	14808722	100	-	.	Parent=FBgn0051139.1.mrna1;Target=FBgn0051139.1 1 224 +
Chr2	stalkie_big_nohaplotig	CDS	14806974	14807081	.	-	0	Parent=FBgn0051139.1.mrna1;Target=FBgn0051139.1 1441 1548 +
Chr2	stalkie_big_nohaplotig	CDS	14807162	14807461	.	-	0	Parent=FBgn0051139.1.mrna1;Target=FBgn0051139.1 1141 1440 +
Chr2	stalkie_big_nohaplotig	CDS	14807530	14808445	.	-	1	Parent=FBgn0051139.1.mrna1;Target=FBgn0051139.1 225 1140 +
Chr2	stalkie_big_nohaplotig	CDS	14808499	14808722	.	-	0	Parent=FBgn0051139.1.mrna1;Target=FBgn0051139.1 1 224 +
Chr2	gffcl	locus	14813691	14814786	.	-	.	ID=RLOC_00014985;geneIDs=FBgn0034118.1.path1;transcripts=FBgn0034118.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14813691	14814786	.	-	.	ID=FBgn0034118.1.mrna1;geneID=FBgn0034118.1.path1;Name=FBgn0034118.1;Dir=sensecoverage=99.8;identity=99.8;matches=971;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014985
Chr2	stalkie_big_nohaplotig	exon	14813691	14814343	100	-	.	Parent=FBgn0034118.1.mrna1;Target=FBgn0034118.1 323 975 +
Chr2	stalkie_big_nohaplotig	exon	14814408	14814515	100	-	.	Parent=FBgn0034118.1.mrna1;Target=FBgn0034118.1 215 322 +
Chr2	stalkie_big_nohaplotig	exon	14814575	14814786	99	-	.	Parent=FBgn0034118.1.mrna1;Target=FBgn0034118.1 3 214 +
Chr2	stalkie_big_nohaplotig	CDS	14813691	14814343	.	-	2	Parent=FBgn0034118.1.mrna1;Target=FBgn0034118.1 323 975 +
Chr2	stalkie_big_nohaplotig	CDS	14814408	14814515	.	-	2	Parent=FBgn0034118.1.mrna1;Target=FBgn0034118.1 215 322 +
Chr2	stalkie_big_nohaplotig	CDS	14814575	14814785	.	-	0	Parent=FBgn0034118.1.mrna1;Target=FBgn0034118.1 4 214 +
Chr2	gffcl	locus	14816701	14825154	.	+	.	ID=RLOC_00014986;geneIDs=FBgn0001308.1.path1;transcripts=FBgn0001308.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14816701	14825154	.	+	.	ID=FBgn0001308.1.mrna1;geneID=FBgn0001308.1.path1;Name=FBgn0001308.1;Dir=sensecoverage=100.0;identity=99.9;matches=2620;mismatches=1;indels=1;unknowns=0;locus=RLOC_00014986
Chr2	stalkie_big_nohaplotig	exon	14816701	14816862	100	+	.	Parent=FBgn0001308.1.mrna1;Target=FBgn0001308.1 1 162 +
Chr2	stalkie_big_nohaplotig	exon	14822564	14823023	99	+	.	Parent=FBgn0001308.1.mrna1;Target=FBgn0001308.1 163 622 +
Chr2	stalkie_big_nohaplotig	exon	14823089	14824956	100	+	.	Parent=FBgn0001308.1.mrna1;Target=FBgn0001308.1 623 2490 +
Chr2	stalkie_big_nohaplotig	exon	14825024	14825154	99	+	.	Parent=FBgn0001308.1.mrna1;Target=FBgn0001308.1 2491 2622 +
Chr2	stalkie_big_nohaplotig	CDS	14816701	14816862	.	+	0	Parent=FBgn0001308.1.mrna1;Target=FBgn0001308.1 1 162 +
Chr2	stalkie_big_nohaplotig	CDS	14822564	14823023	.	+	0	Parent=FBgn0001308.1.mrna1;Target=FBgn0001308.1 163 622 +
Chr2	stalkie_big_nohaplotig	CDS	14823089	14824956	.	+	2	Parent=FBgn0001308.1.mrna1;Target=FBgn0001308.1 623 2490 +
Chr2	stalkie_big_nohaplotig	CDS	14825024	14825154	.	+	0	Parent=FBgn0001308.1.mrna1;Target=FBgn0001308.1 2491 2622 +
Chr2	gffcl	locus	14827265	14829417	.	-	.	ID=RLOC_00014987;geneIDs=FBgn0015925.1.path1;transcripts=FBgn0015925.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14827265	14829417	.	-	.	ID=FBgn0015925.1.mrna1;geneID=FBgn0015925.1.path1;Name=FBgn0015925.1;Dir=sensecoverage=100.0;identity=99.9;matches=1850;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014987
Chr2	stalkie_big_nohaplotig	exon	14827265	14827414	100	-	.	Parent=FBgn0015925.1.mrna1;Target=FBgn0015925.1 1702 1851 +
Chr2	stalkie_big_nohaplotig	exon	14827474	14828015	100	-	.	Parent=FBgn0015925.1.mrna1;Target=FBgn0015925.1 1160 1701 +
Chr2	stalkie_big_nohaplotig	exon	14828076	14828238	100	-	.	Parent=FBgn0015925.1.mrna1;Target=FBgn0015925.1 997 1159 +
Chr2	stalkie_big_nohaplotig	exon	14828308	14828473	100	-	.	Parent=FBgn0015925.1.mrna1;Target=FBgn0015925.1 831 996 +
Chr2	stalkie_big_nohaplotig	exon	14828531	14828978	100	-	.	Parent=FBgn0015925.1.mrna1;Target=FBgn0015925.1 383 830 +
Chr2	stalkie_big_nohaplotig	exon	14829036	14829417	99	-	.	Parent=FBgn0015925.1.mrna1;Target=FBgn0015925.1 1 382 +
Chr2	stalkie_big_nohaplotig	CDS	14827265	14827414	.	-	0	Parent=FBgn0015925.1.mrna1;Target=FBgn0015925.1 1702 1851 +
Chr2	stalkie_big_nohaplotig	CDS	14827474	14828015	.	-	2	Parent=FBgn0015925.1.mrna1;Target=FBgn0015925.1 1160 1701 +
Chr2	stalkie_big_nohaplotig	CDS	14828076	14828238	.	-	0	Parent=FBgn0015925.1.mrna1;Target=FBgn0015925.1 997 1159 +
Chr2	stalkie_big_nohaplotig	CDS	14828308	14828473	.	-	1	Parent=FBgn0015925.1.mrna1;Target=FBgn0015925.1 831 996 +
Chr2	stalkie_big_nohaplotig	CDS	14828531	14828978	.	-	2	Parent=FBgn0015925.1.mrna1;Target=FBgn0015925.1 383 830 +
Chr2	stalkie_big_nohaplotig	CDS	14829036	14829417	.	-	0	Parent=FBgn0015925.1.mrna1;Target=FBgn0015925.1 1 382 +
Chr2	gffcl	locus	14831040	14833869	.	+	.	ID=RLOC_00014988;geneIDs=FBgn0025519.1.path1;transcripts=FBgn0025519.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14831040	14833869	.	+	.	ID=FBgn0025519.1.mrna1;geneID=FBgn0025519.1.path1;Name=FBgn0025519.1;Dir=sensecoverage=98.9;identity=99.6;matches=1495;mismatches=6;indels=0;unknowns=0;locus=RLOC_00014988
Chr2	stalkie_big_nohaplotig	exon	14831040	14831169	100	+	.	Parent=FBgn0025519.1.mrna1;Target=FBgn0025519.1 18 147 +
Chr2	stalkie_big_nohaplotig	exon	14831305	14831442	99	+	.	Parent=FBgn0025519.1.mrna1;Target=FBgn0025519.1 148 285 +
Chr2	stalkie_big_nohaplotig	exon	14831519	14831701	98	+	.	Parent=FBgn0025519.1.mrna1;Target=FBgn0025519.1 286 468 +
Chr2	stalkie_big_nohaplotig	exon	14831842	14831886	100	+	.	Parent=FBgn0025519.1.mrna1;Target=FBgn0025519.1 469 513 +
Chr2	stalkie_big_nohaplotig	exon	14832669	14832976	100	+	.	Parent=FBgn0025519.1.mrna1;Target=FBgn0025519.1 514 821 +
Chr2	stalkie_big_nohaplotig	exon	14833035	14833148	100	+	.	Parent=FBgn0025519.1.mrna1;Target=FBgn0025519.1 822 935 +
Chr2	stalkie_big_nohaplotig	exon	14833217	14833419	100	+	.	Parent=FBgn0025519.1.mrna1;Target=FBgn0025519.1 936 1138 +
Chr2	stalkie_big_nohaplotig	exon	14833490	14833869	99	+	.	Parent=FBgn0025519.1.mrna1;Target=FBgn0025519.1 1139 1518 +
Chr2	stalkie_big_nohaplotig	CDS	14831041	14831169	.	+	0	Parent=FBgn0025519.1.mrna1;Target=FBgn0025519.1 19 147 +
Chr2	stalkie_big_nohaplotig	CDS	14831305	14831442	.	+	0	Parent=FBgn0025519.1.mrna1;Target=FBgn0025519.1 148 285 +
Chr2	stalkie_big_nohaplotig	CDS	14831519	14831701	.	+	0	Parent=FBgn0025519.1.mrna1;Target=FBgn0025519.1 286 468 +
Chr2	stalkie_big_nohaplotig	CDS	14831842	14831886	.	+	0	Parent=FBgn0025519.1.mrna1;Target=FBgn0025519.1 469 513 +
Chr2	stalkie_big_nohaplotig	CDS	14832669	14832976	.	+	0	Parent=FBgn0025519.1.mrna1;Target=FBgn0025519.1 514 821 +
Chr2	stalkie_big_nohaplotig	CDS	14833035	14833148	.	+	1	Parent=FBgn0025519.1.mrna1;Target=FBgn0025519.1 822 935 +
Chr2	stalkie_big_nohaplotig	CDS	14833217	14833419	.	+	1	Parent=FBgn0025519.1.mrna1;Target=FBgn0025519.1 936 1138 +
Chr2	stalkie_big_nohaplotig	CDS	14833490	14833869	.	+	2	Parent=FBgn0025519.1.mrna1;Target=FBgn0025519.1 1139 1518 +
Chr2	gffcl	locus	14938646	14939558	.	-	.	ID=RLOC_00014989;geneIDs=comp149887_c0_seq1.path1;transcripts=comp149887_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14938646	14939558	.	-	.	ID=comp149887_c0_seq1.mrna1;geneID=comp149887_c0_seq1.path1;Name=comp149887_c0_seq1;Dir=indeterminatecoverage=98.1;identity=99.9;matches=912;mismatches=1;indels=0;unknowns=0;Target=comp149887_c0_seq1 931 19 .;CDS_Target=comp149887_c0_seq1 302 195 .;locus=RLOC_00014989
Chr2	stalkie_big_nohaplotig	exon	14938646	14939558	99	-	.	Parent=comp149887_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	14939275	14939382	.	-	0	Parent=comp149887_c0_seq1.mrna1
Chr2	gffcl	locus	14945644	14946451	.	+	.	ID=RLOC_00014990;geneIDs=FBgn0034099.1.path1;transcripts=FBgn0034099.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14945644	14946451	.	+	.	ID=FBgn0034099.1.mrna1;geneID=FBgn0034099.1.path1;Name=FBgn0034099.1;Dir=sensecoverage=100.0;identity=99.9;matches=737;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014990
Chr2	stalkie_big_nohaplotig	exon	14945644	14945854	100	+	.	Parent=FBgn0034099.1.mrna1;Target=FBgn0034099.1 1 211 +
Chr2	stalkie_big_nohaplotig	exon	14945925	14946451	99	+	.	Parent=FBgn0034099.1.mrna1;Target=FBgn0034099.1 212 738 +
Chr2	stalkie_big_nohaplotig	CDS	14945644	14945854	.	+	0	Parent=FBgn0034099.1.mrna1;Target=FBgn0034099.1 1 211 +
Chr2	stalkie_big_nohaplotig	CDS	14945925	14946451	.	+	2	Parent=FBgn0034099.1.mrna1;Target=FBgn0034099.1 212 738 +
Chr2	gffcl	locus	14947069	14947678	.	-	.	ID=RLOC_00014991;geneIDs=FBgn0050195.1.path1;transcripts=FBgn0050195.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14947069	14947678	.	-	.	ID=FBgn0050195.1.mrna1;geneID=FBgn0050195.1.path1;Name=FBgn0050195.1;Dir=sensecoverage=100.0;identity=99.5;matches=543;mismatches=3;indels=0;unknowns=0;locus=RLOC_00014991
Chr2	stalkie_big_nohaplotig	exon	14947069	14947369	100	-	.	Parent=FBgn0050195.1.mrna1;Target=FBgn0050195.1 246 546 +
Chr2	stalkie_big_nohaplotig	exon	14947434	14947678	98	-	.	Parent=FBgn0050195.1.mrna1;Target=FBgn0050195.1 1 245 +
Chr2	stalkie_big_nohaplotig	CDS	14947069	14947369	.	-	1	Parent=FBgn0050195.1.mrna1;Target=FBgn0050195.1 246 546 +
Chr2	stalkie_big_nohaplotig	CDS	14947434	14947678	.	-	0	Parent=FBgn0050195.1.mrna1;Target=FBgn0050195.1 1 245 +
Chr2	gffcl	locus	14949747	14950258	.	-	.	ID=RLOC_00014992;geneIDs=comp131325_c0_seq1.path1;transcripts=comp131325_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14949747	14950258	.	-	.	ID=comp131325_c0_seq1.mrna1;geneID=comp131325_c0_seq1.path1;Name=comp131325_c0_seq1;Dir=antisensecoverage=97.4;identity=99.3;matches=411;mismatches=3;indels=0;unknowns=0;Target=comp131325_c0_seq1 126 317 .;locus=RLOC_00014992
Chr2	stalkie_big_nohaplotig	exon	14949747	14950054	99	-	.	Parent=comp131325_c0_seq1.mrna1;Target=comp131325_c0_seq1 12 319 -
Chr2	stalkie_big_nohaplotig	exon	14950153	14950258	99	-	.	Parent=comp131325_c0_seq1.mrna1;Target=comp131325_c0_seq1 320 425 -
Chr2	stalkie_big_nohaplotig	CDS	14949861	14950052	.	-	0	Parent=comp131325_c0_seq1.mrna1
Chr2	gffcl	locus	14952097	14952625	.	-	.	ID=RLOC_00014993;geneIDs=FBgn0085474.1.path1;transcripts=FBgn0085474.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14952097	14952625	.	-	.	ID=FBgn0085474.1.mrna1;geneID=FBgn0085474.1.path1;Name=FBgn0085474.1;Dir=sensecoverage=100.0;identity=99.5;matches=389;mismatches=1;indels=1;unknowns=0;Target=FBgn0085474.1 2 22 +;locus=RLOC_00014993
Chr2	stalkie_big_nohaplotig	exon	14952097	14952229	100	-	.	Parent=FBgn0085474.1.mrna1;Target=FBgn0085474.1 258 390 +
Chr2	stalkie_big_nohaplotig	exon	14952368	14952625	99	-	.	Parent=FBgn0085474.1.mrna1;Target=FBgn0085474.1 1 257 +
Chr2	stalkie_big_nohaplotig	CDS	14952603	14952624	.	-	0	Parent=FBgn0085474.1.mrna1
Chr2	gffcl	locus	14954483	14955130	.	-	.	ID=RLOC_00014994;geneIDs=FBgn0034755.1.path1;transcripts=FBgn0034755.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14954483	14955130	.	-	.	ID=FBgn0034755.1.mrna1;geneID=FBgn0034755.1.path1;Name=FBgn0034755.1;Dir=sensecoverage=100.0;identity=99.6;matches=529;mismatches=2;indels=0;unknowns=0;locus=RLOC_00014994
Chr2	stalkie_big_nohaplotig	exon	14954483	14954600	100	-	.	Parent=FBgn0034755.1.mrna1;Target=FBgn0034755.1 414 531 +
Chr2	stalkie_big_nohaplotig	exon	14954718	14955130	99	-	.	Parent=FBgn0034755.1.mrna1;Target=FBgn0034755.1 1 413 +
Chr2	stalkie_big_nohaplotig	CDS	14954483	14954600	.	-	1	Parent=FBgn0034755.1.mrna1;Target=FBgn0034755.1 414 531 +
Chr2	stalkie_big_nohaplotig	CDS	14954718	14955130	.	-	0	Parent=FBgn0034755.1.mrna1;Target=FBgn0034755.1 1 413 +
Chr2	gffcl	locus	14955564	14957659	.	-	.	ID=RLOC_00014995;geneIDs=FBgn0050196.1.path1;transcripts=FBgn0050196.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14955564	14957659	.	-	.	ID=FBgn0050196.1.mrna1;geneID=FBgn0050196.1.path1;Name=FBgn0050196.1;Dir=sensecoverage=100.0;identity=98.9;matches=466;mismatches=5;indels=0;unknowns=0;locus=RLOC_00014995
Chr2	stalkie_big_nohaplotig	exon	14955564	14955786	99	-	.	Parent=FBgn0050196.1.mrna1;Target=FBgn0050196.1 249 471 +
Chr2	stalkie_big_nohaplotig	exon	14957412	14957659	98	-	.	Parent=FBgn0050196.1.mrna1;Target=FBgn0050196.1 1 248 +
Chr2	stalkie_big_nohaplotig	CDS	14955564	14955786	.	-	1	Parent=FBgn0050196.1.mrna1;Target=FBgn0050196.1 249 471 +
Chr2	stalkie_big_nohaplotig	CDS	14957412	14957659	.	-	0	Parent=FBgn0050196.1.mrna1;Target=FBgn0050196.1 1 248 +
Chr2	gffcl	locus	14959068	14960345	.	-	.	ID=RLOC_00014996;geneIDs=comp143359_c0_seq1.path1;transcripts=comp143359_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14959068	14960345	.	-	.	ID=comp143359_c0_seq1.mrna1;geneID=comp143359_c0_seq1.path1;Name=comp143359_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.5;matches=1272;mismatches=6;indels=0;unknowns=0;Target=comp143359_c0_seq1 1279 2 .;CDS_Target=comp143359_c0_seq1 637 449 .;locus=RLOC_00014996
Chr2	stalkie_big_nohaplotig	exon	14959068	14960345	99	-	.	Parent=comp143359_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	14959710	14959898	.	-	0	Parent=comp143359_c0_seq1.mrna1
Chr2	gffcl	locus	14964245	14968856	.	+	.	ID=RLOC_00014997;geneIDs=FBgn0033597.1.path1;transcripts=FBgn0033597.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14964245	14968856	.	+	.	ID=FBgn0033597.1.mrna1;geneID=FBgn0033597.1.path1;Name=FBgn0033597.1;Dir=sensecoverage=100.0;identity=99.8;matches=449;mismatches=1;indels=0;unknowns=0;locus=RLOC_00014997
Chr2	stalkie_big_nohaplotig	exon	14964245	14964290	100	+	.	Parent=FBgn0033597.1.mrna1;Target=FBgn0033597.1 1 46 +
Chr2	stalkie_big_nohaplotig	exon	14966907	14967087	100	+	.	Parent=FBgn0033597.1.mrna1;Target=FBgn0033597.1 47 227 +
Chr2	stalkie_big_nohaplotig	exon	14967177	14967252	100	+	.	Parent=FBgn0033597.1.mrna1;Target=FBgn0033597.1 228 303 +
Chr2	stalkie_big_nohaplotig	exon	14968710	14968856	99	+	.	Parent=FBgn0033597.1.mrna1;Target=FBgn0033597.1 304 450 +
Chr2	stalkie_big_nohaplotig	CDS	14964245	14964290	.	+	0	Parent=FBgn0033597.1.mrna1;Target=FBgn0033597.1 1 46 +
Chr2	stalkie_big_nohaplotig	CDS	14966907	14967087	.	+	2	Parent=FBgn0033597.1.mrna1;Target=FBgn0033597.1 47 227 +
Chr2	stalkie_big_nohaplotig	CDS	14967177	14967252	.	+	1	Parent=FBgn0033597.1.mrna1;Target=FBgn0033597.1 228 303 +
Chr2	stalkie_big_nohaplotig	CDS	14968710	14968856	.	+	0	Parent=FBgn0033597.1.mrna1;Target=FBgn0033597.1 304 450 +
Chr2	gffcl	locus	14969530	14971237	.	-	.	ID=RLOC_00014998;geneIDs=ORF580.path1;transcripts=ORF580.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14969530	14971237	.	-	.	ID=ORF580.mrna1;geneID=ORF580.path1;Name=ORF580;Dir=sensecoverage=100.0;identity=99.1;matches=1624;mismatches=14;indels=0;unknowns=0;locus=RLOC_00014998
Chr2	stalkie_big_nohaplotig	exon	14969530	14970999	99	-	.	Parent=ORF580.mrna1;Target=ORF580 169 1638 +
Chr2	stalkie_big_nohaplotig	exon	14971070	14971237	97	-	.	Parent=ORF580.mrna1;Target=ORF580 1 168 +
Chr2	stalkie_big_nohaplotig	CDS	14969530	14970999	.	-	0	Parent=ORF580.mrna1;Target=ORF580 169 1638 +
Chr2	stalkie_big_nohaplotig	CDS	14971070	14971237	.	-	0	Parent=ORF580.mrna1;Target=ORF580 1 168 +
Chr2	gffcl	locus	14979346	14979792	.	-	.	ID=RLOC_00014999;geneIDs=comp134644_c0_seq1.path1;transcripts=comp134644_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14979346	14979792	.	-	.	ID=comp134644_c0_seq1.mrna1;geneID=comp134644_c0_seq1.path1;Name=comp134644_c0_seq1;Dir=indeterminatecoverage=97.2;identity=98.0;matches=443;mismatches=4;indels=5;unknowns=0;Target=comp134644_c0_seq1 465 14 .;CDS_Target=comp134644_c0_seq1 330 16 .;locus=RLOC_00014999
Chr2	stalkie_big_nohaplotig	exon	14979346	14979792	98	-	.	Parent=comp134644_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	14979476	14979790	.	-	0	Parent=comp134644_c0_seq1.mrna1
Chr2	gffcl	locus	14985677	14986346	.	+	.	ID=RLOC_00015000;geneIDs=comp146877_c0_seq1.path1;transcripts=comp146877_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14985677	14986346	.	+	.	ID=comp146877_c0_seq1.mrna1;geneID=comp146877_c0_seq1.path1;Name=comp146877_c0_seq1;Dir=indeterminatecoverage=94.6;identity=99.3;matches=665;mismatches=5;indels=0;unknowns=0;Target=comp146877_c0_seq1 708 39 .;CDS_Target=comp146877_c0_seq1 107 39 .;locus=RLOC_00015000
Chr2	stalkie_big_nohaplotig	exon	14985677	14986346	99	+	.	Parent=comp146877_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	14985677	14985745	.	+	0	Parent=comp146877_c0_seq1.mrna1
Chr2	gffcl	locus	14996511	14997070	.	-	.	ID=RLOC_00015001;geneIDs=comp129023_c0_seq1.path1;transcripts=comp129023_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14996511	14997070	.	-	.	ID=comp129023_c0_seq1.mrna1;geneID=comp129023_c0_seq1.path1;Name=comp129023_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.1;matches=555;mismatches=5;indels=0;unknowns=0;Target=comp129023_c0_seq1 569 10 .;CDS_Target=comp129023_c0_seq1 335 12 .;locus=RLOC_00015001
Chr2	stalkie_big_nohaplotig	exon	14996511	14997070	99	-	.	Parent=comp129023_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	14996745	14997068	.	-	0	Parent=comp129023_c0_seq1.mrna1
Chr2	gffcl	locus	14997087	14997519	.	+	.	ID=RLOC_00015002;geneIDs=comp142174_c0_seq1.path1;transcripts=comp142174_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14997087	14997519	.	+	.	ID=comp142174_c0_seq1.mrna1;geneID=comp142174_c0_seq1.path1;Name=comp142174_c0_seq1;Dir=indeterminatecoverage=89.9;identity=99.1;matches=338;mismatches=2;indels=1;unknowns=0;Target=comp142174_c0_seq1 109 41 .;locus=RLOC_00015002
Chr2	stalkie_big_nohaplotig	exon	14997087	14997293	98	+	.	Parent=comp142174_c0_seq1.mrna1;Target=comp142174_c0_seq1 244 39 .
Chr2	stalkie_big_nohaplotig	exon	14997386	14997519	100	+	.	Parent=comp142174_c0_seq1.mrna1;Target=comp142174_c0_seq1 378 245 .
Chr2	stalkie_big_nohaplotig	CDS	14997089	14997158	.	+	0	Parent=comp142174_c0_seq1.mrna1
Chr2	gffcl	locus	14999380	15071599	.	-	.	ID=RLOC_00015003;geneIDs=comp58981_c0_seq1.path1,comp62815_c0_seq1.path1;transcripts=comp62815_c0_seq1.mrna1,comp58981_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	14999380	15013097	.	-	.	ID=comp62815_c0_seq1.mrna1;geneID=comp62815_c0_seq1.path1;Name=comp62815_c0_seq1;Dir=indeterminatecoverage=94.0;identity=99.6;matches=548;mismatches=2;indels=0;unknowns=0;Target=comp62815_c0_seq1 453 412 .;locus=RLOC_00015003
Chr2	stalkie_big_nohaplotig	exon	14999380	14999904	99	-	.	Parent=comp62815_c0_seq1.mrna1;Target=comp62815_c0_seq1 585 61 .
Chr2	stalkie_big_nohaplotig	exon	15002760	15002764	100	-	.	Parent=comp62815_c0_seq1.mrna1;Target=comp62815_c0_seq1 60 56 .
Chr2	stalkie_big_nohaplotig	exon	15003171	15003175	100	-	.	Parent=comp62815_c0_seq1.mrna1;Target=comp62815_c0_seq1 55 51 .
Chr2	stalkie_big_nohaplotig	exon	15005375	15005382	100	-	.	Parent=comp62815_c0_seq1.mrna1;Target=comp62815_c0_seq1 50 43 .
Chr2	stalkie_big_nohaplotig	exon	15013091	15013097	100	-	.	Parent=comp62815_c0_seq1.mrna1;Target=comp62815_c0_seq1 42 36 .
Chr2	stalkie_big_nohaplotig	CDS	14999512	14999553	.	-	0	Parent=comp62815_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15004846	15071599	.	-	.	ID=comp58981_c0_seq1.mrna1;geneID=comp58981_c0_seq1.path1;Name=comp58981_c0_seq1;Dir=indeterminatecoverage=91.9;identity=100.0;matches=589;mismatches=0;indels=0;unknowns=0;Target=comp58981_c0_seq1 467 267 .;locus=RLOC_00015003
Chr2	stalkie_big_nohaplotig	exon	15004846	15005404	100	-	.	Parent=comp58981_c0_seq1.mrna1;Target=comp58981_c0_seq1 641 83 .
Chr2	stalkie_big_nohaplotig	exon	15035200	15035208	100	-	.	Parent=comp58981_c0_seq1.mrna1;Target=comp58981_c0_seq1 82 74 .
Chr2	stalkie_big_nohaplotig	exon	15037970	15037974	100	-	.	Parent=comp58981_c0_seq1.mrna1;Target=comp58981_c0_seq1 73 69 .
Chr2	stalkie_big_nohaplotig	exon	15051346	15051351	100	-	.	Parent=comp58981_c0_seq1.mrna1;Target=comp58981_c0_seq1 68 63 .
Chr2	stalkie_big_nohaplotig	exon	15067562	15067567	100	-	.	Parent=comp58981_c0_seq1.mrna1;Target=comp58981_c0_seq1 62 57 .
Chr2	stalkie_big_nohaplotig	exon	15071596	15071599	100	-	.	Parent=comp58981_c0_seq1.mrna1;Target=comp58981_c0_seq1 56 53 .
Chr2	stalkie_big_nohaplotig	CDS	15005020	15005220	.	-	0	Parent=comp58981_c0_seq1.mrna1
Chr2	gffcl	locus	15010660	15011654	.	+	.	ID=RLOC_00015004;geneIDs=comp149796_c1_seq1.path1;transcripts=comp149796_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15010660	15011654	.	+	.	ID=comp149796_c1_seq1.mrna1;geneID=comp149796_c1_seq1.path1;Name=comp149796_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=993;mismatches=2;indels=0;unknowns=0;Target=comp149796_c1_seq1 995 1 .;CDS_Target=comp149796_c1_seq1 844 158 .;locus=RLOC_00015004
Chr2	stalkie_big_nohaplotig	exon	15010660	15011654	99	+	.	Parent=comp149796_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	15010817	15011503	.	+	0	Parent=comp149796_c1_seq1.mrna1
Chr2	gffcl	locus	15027100	15027892	.	+	.	ID=RLOC_00015005;geneIDs=comp142593_c0_seq1.path1;transcripts=comp142593_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15027100	15027892	.	+	.	ID=comp142593_c0_seq1.mrna1;geneID=comp142593_c0_seq1.path1;Name=comp142593_c0_seq1;Dir=indeterminatecoverage=95.4;identity=99.4;matches=788;mismatches=5;indels=0;unknowns=0;Target=comp142593_c0_seq1 831 39 .;CDS_Target=comp142593_c0_seq1 716 609 .;locus=RLOC_00015005
Chr2	stalkie_big_nohaplotig	exon	15027100	15027892	99	+	.	Parent=comp142593_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	15027670	15027777	.	+	0	Parent=comp142593_c0_seq1.mrna1
Chr2	gffcl	locus	15046149	15054069	.	+	.	ID=RLOC_00015006;geneIDs=FBgn0050021.1.path1;transcripts=FBgn0050021.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15046149	15054069	.	+	.	ID=FBgn0050021.1.mrna1;geneID=FBgn0050021.1.path1;Name=FBgn0050021.1;Dir=sensecoverage=100.0;identity=99.8;matches=1670;mismatches=4;indels=0;unknowns=0;locus=RLOC_00015006
Chr2	stalkie_big_nohaplotig	exon	15046149	15046197	100	+	.	Parent=FBgn0050021.1.mrna1;Target=FBgn0050021.1 1 49 +
Chr2	stalkie_big_nohaplotig	exon	15046914	15047095	99	+	.	Parent=FBgn0050021.1.mrna1;Target=FBgn0050021.1 50 231 +
Chr2	stalkie_big_nohaplotig	exon	15047169	15047264	100	+	.	Parent=FBgn0050021.1.mrna1;Target=FBgn0050021.1 232 327 +
Chr2	stalkie_big_nohaplotig	exon	15047382	15047513	100	+	.	Parent=FBgn0050021.1.mrna1;Target=FBgn0050021.1 328 459 +
Chr2	stalkie_big_nohaplotig	exon	15049731	15049760	100	+	.	Parent=FBgn0050021.1.mrna1;Target=FBgn0050021.1 460 489 +
Chr2	stalkie_big_nohaplotig	exon	15051554	15051721	99	+	.	Parent=FBgn0050021.1.mrna1;Target=FBgn0050021.1 490 657 +
Chr2	stalkie_big_nohaplotig	exon	15051787	15051969	100	+	.	Parent=FBgn0050021.1.mrna1;Target=FBgn0050021.1 658 840 +
Chr2	stalkie_big_nohaplotig	exon	15052029	15052167	100	+	.	Parent=FBgn0050021.1.mrna1;Target=FBgn0050021.1 841 979 +
Chr2	stalkie_big_nohaplotig	exon	15052501	15052677	98	+	.	Parent=FBgn0050021.1.mrna1;Target=FBgn0050021.1 980 1156 +
Chr2	stalkie_big_nohaplotig	exon	15052755	15053098	100	+	.	Parent=FBgn0050021.1.mrna1;Target=FBgn0050021.1 1157 1500 +
Chr2	stalkie_big_nohaplotig	exon	15053896	15054069	100	+	.	Parent=FBgn0050021.1.mrna1;Target=FBgn0050021.1 1501 1674 +
Chr2	stalkie_big_nohaplotig	CDS	15046149	15046197	.	+	0	Parent=FBgn0050021.1.mrna1;Target=FBgn0050021.1 1 49 +
Chr2	stalkie_big_nohaplotig	CDS	15046914	15047095	.	+	2	Parent=FBgn0050021.1.mrna1;Target=FBgn0050021.1 50 231 +
Chr2	stalkie_big_nohaplotig	CDS	15047169	15047264	.	+	0	Parent=FBgn0050021.1.mrna1;Target=FBgn0050021.1 232 327 +
Chr2	stalkie_big_nohaplotig	CDS	15047382	15047513	.	+	0	Parent=FBgn0050021.1.mrna1;Target=FBgn0050021.1 328 459 +
Chr2	stalkie_big_nohaplotig	CDS	15049731	15049760	.	+	0	Parent=FBgn0050021.1.mrna1;Target=FBgn0050021.1 460 489 +
Chr2	stalkie_big_nohaplotig	CDS	15051554	15051721	.	+	0	Parent=FBgn0050021.1.mrna1;Target=FBgn0050021.1 490 657 +
Chr2	stalkie_big_nohaplotig	CDS	15051787	15051969	.	+	0	Parent=FBgn0050021.1.mrna1;Target=FBgn0050021.1 658 840 +
Chr2	stalkie_big_nohaplotig	CDS	15052029	15052167	.	+	0	Parent=FBgn0050021.1.mrna1;Target=FBgn0050021.1 841 979 +
Chr2	stalkie_big_nohaplotig	CDS	15052501	15052677	.	+	2	Parent=FBgn0050021.1.mrna1;Target=FBgn0050021.1 980 1156 +
Chr2	stalkie_big_nohaplotig	CDS	15052755	15053098	.	+	2	Parent=FBgn0050021.1.mrna1;Target=FBgn0050021.1 1157 1500 +
Chr2	stalkie_big_nohaplotig	CDS	15053896	15054069	.	+	0	Parent=FBgn0050021.1.mrna1;Target=FBgn0050021.1 1501 1674 +
Chr2	gffcl	locus	15057276	15060574	.	+	.	ID=RLOC_00015007;geneIDs=FBgn0037513.1.path1;transcripts=FBgn0037513.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15057276	15060574	.	+	.	ID=FBgn0037513.1.mrna1;geneID=FBgn0037513.1.path1;Name=FBgn0037513.1;Dir=sensecoverage=100.0;identity=99.9;matches=1166;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015007
Chr2	stalkie_big_nohaplotig	exon	15057276	15057388	99	+	.	Parent=FBgn0037513.1.mrna1;Target=FBgn0037513.1 1 113 +
Chr2	stalkie_big_nohaplotig	exon	15059394	15059656	100	+	.	Parent=FBgn0037513.1.mrna1;Target=FBgn0037513.1 114 376 +
Chr2	stalkie_big_nohaplotig	exon	15059720	15060339	100	+	.	Parent=FBgn0037513.1.mrna1;Target=FBgn0037513.1 377 996 +
Chr2	stalkie_big_nohaplotig	exon	15060404	15060574	100	+	.	Parent=FBgn0037513.1.mrna1;Target=FBgn0037513.1 997 1167 +
Chr2	stalkie_big_nohaplotig	CDS	15057276	15057388	.	+	0	Parent=FBgn0037513.1.mrna1;Target=FBgn0037513.1 1 113 +
Chr2	stalkie_big_nohaplotig	CDS	15059394	15059656	.	+	1	Parent=FBgn0037513.1.mrna1;Target=FBgn0037513.1 114 376 +
Chr2	stalkie_big_nohaplotig	CDS	15059720	15060339	.	+	2	Parent=FBgn0037513.1.mrna1;Target=FBgn0037513.1 377 996 +
Chr2	stalkie_big_nohaplotig	CDS	15060404	15060574	.	+	0	Parent=FBgn0037513.1.mrna1;Target=FBgn0037513.1 997 1167 +
Chr2	gffcl	locus	15060683	15062242	.	-	.	ID=RLOC_00015008;geneIDs=FBgn0033584.1.path1;transcripts=FBgn0033584.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15060683	15062242	.	-	.	ID=FBgn0033584.1.mrna1;geneID=FBgn0033584.1.path1;Name=FBgn0033584.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1552;mismatches=8;indels=0;unknowns=0;Target=FBgn0033584.1 1560 1 .;locus=RLOC_00015008
Chr2	stalkie_big_nohaplotig	exon	15060683	15062242	99	-	.	Parent=FBgn0033584.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	15060683	15062242	.	-	0	Parent=FBgn0033584.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15066691	15071534	.	-	.	ID=comp1355273_c0_seq1.mrna1;geneID=comp1355273_c0_seq1.path1;Name=comp1355273_c0_seq1;Dir=antisensecoverage=100.0;identity=97.9;matches=279;mismatches=6;indels=0;unknowns=0;locus=RLOC_00015009
Chr2	stalkie_big_nohaplotig	exon	15066691	15066714	100	-	.	Parent=comp1355273_c0_seq1.mrna1;Target=comp1355273_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	exon	15071274	15071534	97	-	.	Parent=comp1355273_c0_seq1.mrna1;Target=comp1355273_c0_seq1 25 285 -
Chr2	stalkie_big_nohaplotig	CDS	15066692	15066714	.	-	2	Parent=comp1355273_c0_seq1.mrna1;Target=comp1355273_c0_seq1 2 24 .
Chr2	stalkie_big_nohaplotig	CDS	15071274	15071409	.	-	0	Parent=comp1355273_c0_seq1.mrna1;Target=comp1355273_c0_seq1 25 160 .
Chr2	gffcl	locus	15081774	15084304	.	+	.	ID=RLOC_00015011;geneIDs=FBgn0033427.1.path1;transcripts=FBgn0033427.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15081774	15084304	.	+	.	ID=FBgn0033427.1.mrna1;geneID=FBgn0033427.1.path1;Name=FBgn0033427.1;Dir=sensecoverage=100.0;identity=99.2;matches=2268;mismatches=18;indels=0;unknowns=0;locus=RLOC_00015011
Chr2	stalkie_big_nohaplotig	exon	15081774	15082441	99	+	.	Parent=FBgn0033427.1.mrna1;Target=FBgn0033427.1 1 668 +
Chr2	stalkie_big_nohaplotig	exon	15082502	15083073	98	+	.	Parent=FBgn0033427.1.mrna1;Target=FBgn0033427.1 669 1240 +
Chr2	stalkie_big_nohaplotig	exon	15083134	15083570	99	+	.	Parent=FBgn0033427.1.mrna1;Target=FBgn0033427.1 1241 1677 +
Chr2	stalkie_big_nohaplotig	exon	15083640	15083964	100	+	.	Parent=FBgn0033427.1.mrna1;Target=FBgn0033427.1 1678 2002 +
Chr2	stalkie_big_nohaplotig	exon	15084021	15084304	100	+	.	Parent=FBgn0033427.1.mrna1;Target=FBgn0033427.1 2003 2286 +
Chr2	stalkie_big_nohaplotig	CDS	15081774	15082441	.	+	0	Parent=FBgn0033427.1.mrna1;Target=FBgn0033427.1 1 668 +
Chr2	stalkie_big_nohaplotig	CDS	15082502	15083073	.	+	1	Parent=FBgn0033427.1.mrna1;Target=FBgn0033427.1 669 1240 +
Chr2	stalkie_big_nohaplotig	CDS	15083134	15083570	.	+	2	Parent=FBgn0033427.1.mrna1;Target=FBgn0033427.1 1241 1677 +
Chr2	stalkie_big_nohaplotig	CDS	15083640	15083964	.	+	0	Parent=FBgn0033427.1.mrna1;Target=FBgn0033427.1 1678 2002 +
Chr2	stalkie_big_nohaplotig	CDS	15084021	15084304	.	+	2	Parent=FBgn0033427.1.mrna1;Target=FBgn0033427.1 2003 2286 +
Chr2	gffcl	locus	15102806	15103405	.	-	.	ID=RLOC_00015013;geneIDs=comp142802_c0_seq1.path1;transcripts=comp142802_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15102806	15103405	.	-	.	ID=comp142802_c0_seq1.mrna1;geneID=comp142802_c0_seq1.path1;Name=comp142802_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.2;matches=589;mismatches=10;indels=13;unknowns=0;Target=comp142802_c0_seq1 611 1 .;CDS_Target=comp142802_c0_seq1 427 281 .;locus=RLOC_00015013
Chr2	stalkie_big_nohaplotig	exon	15102806	15103405	96	-	.	Parent=comp142802_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	15102991	15103125	.	-	0	Parent=comp142802_c0_seq1.mrna1
Chr2	gffcl	locus	15112945	15117053	.	-	.	ID=RLOC_00015014;geneIDs=FBgn0033423.1.path1;transcripts=FBgn0033423.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15112945	15117053	.	-	.	ID=FBgn0033423.1.mrna1;geneID=FBgn0033423.1.path1;Name=FBgn0033423.1;Dir=sensecoverage=100.0;identity=98.5;matches=1546;mismatches=23;indels=0;unknowns=0;locus=RLOC_00015014
Chr2	stalkie_big_nohaplotig	exon	15112945	15113271	98	-	.	Parent=FBgn0033423.1.mrna1;Target=FBgn0033423.1 1243 1569 +
Chr2	stalkie_big_nohaplotig	exon	15113932	15115088	98	-	.	Parent=FBgn0033423.1.mrna1;Target=FBgn0033423.1 86 1242 +
Chr2	stalkie_big_nohaplotig	exon	15116969	15117053	96	-	.	Parent=FBgn0033423.1.mrna1;Target=FBgn0033423.1 1 85 +
Chr2	stalkie_big_nohaplotig	CDS	15112945	15113271	.	-	0	Parent=FBgn0033423.1.mrna1;Target=FBgn0033423.1 1243 1569 +
Chr2	stalkie_big_nohaplotig	CDS	15113932	15115088	.	-	2	Parent=FBgn0033423.1.mrna1;Target=FBgn0033423.1 86 1242 +
Chr2	stalkie_big_nohaplotig	CDS	15116969	15117053	.	-	0	Parent=FBgn0033423.1.mrna1;Target=FBgn0033423.1 1 85 +
Chr2	gffcl	locus	15154001	15154372	.	-	.	ID=RLOC_00015015;geneIDs=comp146993_c0_seq1.path1;transcripts=comp146993_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15154001	15154372	.	-	.	ID=comp146993_c0_seq1.mrna1;geneID=comp146993_c0_seq1.path1;Name=comp146993_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=367;mismatches=5;indels=0;unknowns=0;Target=comp146993_c0_seq1 372 1 .;CDS_Target=comp146993_c0_seq1 243 76 .;locus=RLOC_00015015
Chr2	stalkie_big_nohaplotig	exon	15154001	15154372	98	-	.	Parent=comp146993_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	15154130	15154297	.	-	0	Parent=comp146993_c0_seq1.mrna1
Chr2	gffcl	locus	15180057	15184231	.	+	.	ID=RLOC_00015016;geneIDs=comp160211_c0_seq1.path1;transcripts=comp160211_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15180057	15184231	.	+	.	ID=comp160211_c0_seq1.mrna1;geneID=comp160211_c0_seq1.path1;Name=comp160211_c0_seq1;Dir=sensecoverage=99.2;identity=97.4;matches=1599;mismatches=36;indels=6;unknowns=0;Target=comp160211_c0_seq1 408 1139 +;locus=RLOC_00015016
Chr2	stalkie_big_nohaplotig	exon	15180057	15180140	97	+	.	Parent=comp160211_c0_seq1.mrna1;Target=comp160211_c0_seq1 14 97 +
Chr2	stalkie_big_nohaplotig	exon	15182585	15184001	97	+	.	Parent=comp160211_c0_seq1.mrna1;Target=comp160211_c0_seq1 98 1520 +
Chr2	stalkie_big_nohaplotig	exon	15184043	15184053	100	+	.	Parent=comp160211_c0_seq1.mrna1;Target=comp160211_c0_seq1 1538 1548 +
Chr2	stalkie_big_nohaplotig	exon	15184109	15184231	97	+	.	Parent=comp160211_c0_seq1.mrna1;Target=comp160211_c0_seq1 1549 1671 +
Chr2	stalkie_big_nohaplotig	CDS	15182893	15183624	.	+	0	Parent=comp160211_c0_seq1.mrna1
Chr2	gffcl	locus	15187935	15191839	.	+	.	ID=RLOC_00015017;geneIDs=ORF1387.path1;transcripts=ORF1387.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15187935	15191839	.	+	.	ID=ORF1387.mrna1;geneID=ORF1387.path1;Name=ORF1387;Dir=sensecoverage=100.0;identity=94.5;matches=1058;mismatches=22;indels=39;unknowns=0;locus=RLOC_00015017
Chr2	stalkie_big_nohaplotig	exon	15187935	15187953	100	+	.	Parent=ORF1387.mrna1;Target=ORF1387 1 19 +
Chr2	stalkie_big_nohaplotig	exon	15190290	15190385	97	+	.	Parent=ORF1387.mrna1;Target=ORF1387 20 115 +
Chr2	stalkie_big_nohaplotig	exon	15190875	15191839	94	+	.	Parent=ORF1387.mrna1;Target=ORF1387 116 1119 +
Chr2	stalkie_big_nohaplotig	CDS	15187935	15187953	.	+	0	Parent=ORF1387.mrna1;Target=ORF1387 1 19 +
Chr2	stalkie_big_nohaplotig	CDS	15190290	15190385	.	+	2	Parent=ORF1387.mrna1;Target=ORF1387 20 115 +
Chr2	stalkie_big_nohaplotig	CDS	15190875	15191839	.	+	2	Parent=ORF1387.mrna1;Target=ORF1387 116 1119 +
Chr2	gffcl	locus	15204090	15205367	.	+	.	ID=RLOC_00015018;geneIDs=ORF1558.path1;transcripts=ORF1558.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15204090	15205367	.	+	.	ID=ORF1558.mrna1;geneID=ORF1558.path1;Name=ORF1558;Dir=sensecoverage=99.0;identity=99.4;matches=1045;mismatches=6;indels=0;unknowns=0;locus=RLOC_00015018
Chr2	stalkie_big_nohaplotig	exon	15204090	15204184	100	+	.	Parent=ORF1558.mrna1;Target=ORF1558 12 106 +
Chr2	stalkie_big_nohaplotig	exon	15204412	15205367	99	+	.	Parent=ORF1558.mrna1;Target=ORF1558 107 1062 +
Chr2	stalkie_big_nohaplotig	CDS	15204091	15204184	.	+	0	Parent=ORF1558.mrna1;Target=ORF1558 13 106 +
Chr2	stalkie_big_nohaplotig	CDS	15204412	15205367	.	+	2	Parent=ORF1558.mrna1;Target=ORF1558 107 1062 +
Chr2	gffcl	locus	15232541	15236717	.	-	.	ID=RLOC_00015019;geneIDs=Dp_FBgn0246085.1.path1;transcripts=Dp_FBgn0246085.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15232541	15236717	.	-	.	ID=Dp_FBgn0246085.1.mrna1;geneID=Dp_FBgn0246085.1.path1;Name=Dp_FBgn0246085.1;Dir=sensecoverage=100.0;identity=99.7;matches=580;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015019
Chr2	stalkie_big_nohaplotig	exon	15232541	15232661	98	-	.	Parent=Dp_FBgn0246085.1.mrna1;Target=Dp_FBgn0246085.1 462 582 +
Chr2	stalkie_big_nohaplotig	exon	15232733	15232862	100	-	.	Parent=Dp_FBgn0246085.1.mrna1;Target=Dp_FBgn0246085.1 332 461 +
Chr2	stalkie_big_nohaplotig	exon	15236387	15236717	100	-	.	Parent=Dp_FBgn0246085.1.mrna1;Target=Dp_FBgn0246085.1 1 331 +
Chr2	stalkie_big_nohaplotig	CDS	15232541	15232661	.	-	1	Parent=Dp_FBgn0246085.1.mrna1;Target=Dp_FBgn0246085.1 462 582 +
Chr2	stalkie_big_nohaplotig	CDS	15232733	15232862	.	-	2	Parent=Dp_FBgn0246085.1.mrna1;Target=Dp_FBgn0246085.1 332 461 +
Chr2	stalkie_big_nohaplotig	CDS	15236387	15236717	.	-	0	Parent=Dp_FBgn0246085.1.mrna1;Target=Dp_FBgn0246085.1 1 331 +
Chr2	gffcl	locus	15236968	15237424	.	+	.	ID=RLOC_00015020;geneIDs=comp716577_c0_seq1.path1;transcripts=comp716577_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15236968	15237424	.	+	.	ID=comp716577_c0_seq1.mrna1;geneID=comp716577_c0_seq1.path1;Name=comp716577_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=456;mismatches=1;indels=0;unknowns=0;Target=comp716577_c0_seq1 457 1 .;CDS_Target=comp716577_c0_seq1 104 3 .;locus=RLOC_00015020
Chr2	stalkie_big_nohaplotig	exon	15236968	15237424	99	+	.	Parent=comp716577_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	15236970	15237071	.	+	0	Parent=comp716577_c0_seq1.mrna1
Chr2	gffcl	locus	15241722	15242535	.	-	.	ID=RLOC_00015021;geneIDs=comp152954_c0_seq1.path1;transcripts=comp152954_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15241722	15242535	.	-	.	ID=comp152954_c0_seq1.mrna1;geneID=comp152954_c0_seq1.path1;Name=comp152954_c0_seq1;Dir=sensecoverage=100.0;identity=97.5;matches=734;mismatches=9;indels=10;unknowns=0;locus=RLOC_00015021
Chr2	stalkie_big_nohaplotig	exon	15241722	15242398	97	-	.	Parent=comp152954_c0_seq1.mrna1;Target=comp152954_c0_seq1 67 753 +
Chr2	stalkie_big_nohaplotig	exon	15242470	15242535	100	-	.	Parent=comp152954_c0_seq1.mrna1;Target=comp152954_c0_seq1 1 66 +
Chr2	stalkie_big_nohaplotig	CDS	15241907	15242398	.	-	0	Parent=comp152954_c0_seq1.mrna1;Target=comp152954_c0_seq1 67 558 +
Chr2	stalkie_big_nohaplotig	CDS	15242470	15242535	.	-	0	Parent=comp152954_c0_seq1.mrna1;Target=comp152954_c0_seq1 1 66 +
Chr2	gffcl	locus	15256593	15257457	.	-	.	ID=RLOC_00015023;geneIDs=comp152605_c0_seq1.path1;transcripts=comp152605_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15256593	15257457	.	-	.	ID=comp152605_c0_seq1.mrna1;geneID=comp152605_c0_seq1.path1;Name=comp152605_c0_seq1;Dir=sensecoverage=96.1;identity=97.9;matches=659;mismatches=14;indels=0;unknowns=0;Target=comp152605_c0_seq1 109 348 +;locus=RLOC_00015023
Chr2	stalkie_big_nohaplotig	exon	15256593	15256725	98	-	.	Parent=comp152605_c0_seq1.mrna1;Target=comp152605_c0_seq1 566 698 +
Chr2	stalkie_big_nohaplotig	exon	15256790	15256865	94	-	.	Parent=comp152605_c0_seq1.mrna1;Target=comp152605_c0_seq1 490 565 +
Chr2	stalkie_big_nohaplotig	exon	15256926	15257066	97	-	.	Parent=comp152605_c0_seq1.mrna1;Target=comp152605_c0_seq1 349 489 +
Chr2	stalkie_big_nohaplotig	exon	15257135	15257457	98	-	.	Parent=comp152605_c0_seq1.mrna1;Target=comp152605_c0_seq1 26 348 +
Chr2	stalkie_big_nohaplotig	CDS	15257135	15257374	.	-	0	Parent=comp152605_c0_seq1.mrna1
Chr2	gffcl	locus	15263888	15264532	.	-	.	ID=RLOC_00015024;geneIDs=FBgn0034321.1.path1;transcripts=FBgn0034321.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15263888	15264532	.	-	.	ID=FBgn0034321.1.mrna1;geneID=FBgn0034321.1.path1;Name=FBgn0034321.1;Dir=sensecoverage=100.0;identity=100.0;matches=591;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015024
Chr2	stalkie_big_nohaplotig	exon	15263888	15264370	100	-	.	Parent=FBgn0034321.1.mrna1;Target=FBgn0034321.1 109 591 +
Chr2	stalkie_big_nohaplotig	exon	15264425	15264532	100	-	.	Parent=FBgn0034321.1.mrna1;Target=FBgn0034321.1 1 108 +
Chr2	stalkie_big_nohaplotig	CDS	15263888	15264370	.	-	0	Parent=FBgn0034321.1.mrna1;Target=FBgn0034321.1 109 591 +
Chr2	stalkie_big_nohaplotig	CDS	15264425	15264532	.	-	0	Parent=FBgn0034321.1.mrna1;Target=FBgn0034321.1 1 108 +
Chr2	gffcl	locus	15268283	15269120	.	-	.	ID=RLOC_00015025;geneIDs=comp147887_c0_seq1.path1;transcripts=comp147887_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15268283	15269120	.	-	.	ID=comp147887_c0_seq1.mrna1;geneID=comp147887_c0_seq1.path1;Name=comp147887_c0_seq1;Dir=sensecoverage=98.7;identity=100.0;matches=775;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015025
Chr2	stalkie_big_nohaplotig	exon	15268283	15268976	100	-	.	Parent=comp147887_c0_seq1.mrna1;Target=comp147887_c0_seq1 92 785 +
Chr2	stalkie_big_nohaplotig	exon	15269040	15269120	100	-	.	Parent=comp147887_c0_seq1.mrna1;Target=comp147887_c0_seq1 11 91 +
Chr2	stalkie_big_nohaplotig	CDS	15268482	15268976	.	-	0	Parent=comp147887_c0_seq1.mrna1;Target=comp147887_c0_seq1 92 586 +
Chr2	stalkie_big_nohaplotig	CDS	15269040	15269120	.	-	0	Parent=comp147887_c0_seq1.mrna1;Target=comp147887_c0_seq1 11 91 +
Chr2	gffcl	locus	15278137	15279293	.	-	.	ID=RLOC_00015026;geneIDs=FBgn0050269.1.path1;transcripts=FBgn0050269.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15278137	15279293	.	-	.	ID=FBgn0050269.1.mrna1;geneID=FBgn0050269.1.path1;Name=FBgn0050269.1;Dir=sensecoverage=100.0;identity=99.8;matches=458;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015026
Chr2	stalkie_big_nohaplotig	exon	15278137	15278242	100	-	.	Parent=FBgn0050269.1.mrna1;Target=FBgn0050269.1 354 459 +
Chr2	stalkie_big_nohaplotig	exon	15278879	15279014	100	-	.	Parent=FBgn0050269.1.mrna1;Target=FBgn0050269.1 218 353 +
Chr2	stalkie_big_nohaplotig	exon	15279077	15279293	99	-	.	Parent=FBgn0050269.1.mrna1;Target=FBgn0050269.1 1 217 +
Chr2	stalkie_big_nohaplotig	CDS	15278137	15278242	.	-	1	Parent=FBgn0050269.1.mrna1;Target=FBgn0050269.1 354 459 +
Chr2	stalkie_big_nohaplotig	CDS	15278879	15279014	.	-	2	Parent=FBgn0050269.1.mrna1;Target=FBgn0050269.1 218 353 +
Chr2	stalkie_big_nohaplotig	CDS	15279077	15279293	.	-	0	Parent=FBgn0050269.1.mrna1;Target=FBgn0050269.1 1 217 +
Chr2	gffcl	locus	15291591	15294155	.	-	.	ID=RLOC_00015028;geneIDs=FBgn0050273.1.path1;transcripts=FBgn0050273.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15291591	15294155	.	-	.	ID=FBgn0050273.1.mrna1;geneID=FBgn0050273.1.path1;Name=FBgn0050273.1;Dir=sensecoverage=100.0;identity=100.0;matches=582;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015028
Chr2	stalkie_big_nohaplotig	exon	15291591	15291690	100	-	.	Parent=FBgn0050273.1.mrna1;Target=FBgn0050273.1 483 582 +
Chr2	stalkie_big_nohaplotig	exon	15293273	15293408	100	-	.	Parent=FBgn0050273.1.mrna1;Target=FBgn0050273.1 347 482 +
Chr2	stalkie_big_nohaplotig	exon	15293810	15294155	100	-	.	Parent=FBgn0050273.1.mrna1;Target=FBgn0050273.1 1 346 +
Chr2	stalkie_big_nohaplotig	CDS	15291591	15291690	.	-	1	Parent=FBgn0050273.1.mrna1;Target=FBgn0050273.1 483 582 +
Chr2	stalkie_big_nohaplotig	CDS	15293273	15293408	.	-	2	Parent=FBgn0050273.1.mrna1;Target=FBgn0050273.1 347 482 +
Chr2	stalkie_big_nohaplotig	CDS	15293810	15294155	.	-	0	Parent=FBgn0050273.1.mrna1;Target=FBgn0050273.1 1 346 +
Chr2	gffcl	locus	15298193	15299829	.	-	.	ID=RLOC_00015029;geneIDs=comp143809_c1_seq1.path1;transcripts=comp143809_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15298193	15299829	.	-	.	ID=comp143809_c1_seq1.mrna1;geneID=comp143809_c1_seq1.path1;Name=comp143809_c1_seq1;Dir=antisensecoverage=99.8;identity=99.5;matches=607;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015029
Chr2	stalkie_big_nohaplotig	exon	15298193	15298432	99	-	.	Parent=comp143809_c1_seq1.mrna1;Target=comp143809_c1_seq1 1 240 -
Chr2	stalkie_big_nohaplotig	exon	15299222	15299357	99	-	.	Parent=comp143809_c1_seq1.mrna1;Target=comp143809_c1_seq1 241 376 -
Chr2	stalkie_big_nohaplotig	exon	15299596	15299829	100	-	.	Parent=comp143809_c1_seq1.mrna1;Target=comp143809_c1_seq1 377 610 -
Chr2	stalkie_big_nohaplotig	CDS	15298324	15298432	.	-	1	Parent=comp143809_c1_seq1.mrna1;Target=comp143809_c1_seq1 132 240 .
Chr2	stalkie_big_nohaplotig	CDS	15299222	15299357	.	-	2	Parent=comp143809_c1_seq1.mrna1;Target=comp143809_c1_seq1 241 376 .
Chr2	stalkie_big_nohaplotig	CDS	15299596	15299671	.	-	0	Parent=comp143809_c1_seq1.mrna1;Target=comp143809_c1_seq1 377 452 .
Chr2	gffcl	locus	15302079	15304659	.	-	.	ID=RLOC_00015030;geneIDs=comp152917_c0_seq1.path1;transcripts=comp152917_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15302079	15304659	.	-	.	ID=comp152917_c0_seq1.mrna1;geneID=comp152917_c0_seq1.path1;Name=comp152917_c0_seq1;Dir=antisensecoverage=99.7;identity=98.3;matches=751;mismatches=12;indels=1;unknowns=0;locus=RLOC_00015030
Chr2	stalkie_big_nohaplotig	exon	15302079	15302345	98	-	.	Parent=comp152917_c0_seq1.mrna1;Target=comp152917_c0_seq1 3 270 -
Chr2	stalkie_big_nohaplotig	exon	15302424	15302562	100	-	.	Parent=comp152917_c0_seq1.mrna1;Target=comp152917_c0_seq1 271 409 -
Chr2	stalkie_big_nohaplotig	exon	15304303	15304659	97	-	.	Parent=comp152917_c0_seq1.mrna1;Target=comp152917_c0_seq1 410 766 -
Chr2	stalkie_big_nohaplotig	CDS	15302246	15302345	.	-	1	Parent=comp152917_c0_seq1.mrna1;Target=comp152917_c0_seq1 171 270 .
Chr2	stalkie_big_nohaplotig	CDS	15302424	15302562	.	-	2	Parent=comp152917_c0_seq1.mrna1;Target=comp152917_c0_seq1 271 409 .
Chr2	stalkie_big_nohaplotig	CDS	15304303	15304519	.	-	0	Parent=comp152917_c0_seq1.mrna1;Target=comp152917_c0_seq1 410 626 .
Chr2	gffcl	locus	15312075	15313043	.	-	.	ID=RLOC_00015031;geneIDs=FBgn0260768.1.path2;transcripts=FBgn0260768.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	15312075	15313043	.	-	.	ID=FBgn0260768.1.mrna2;geneID=FBgn0260768.1.path2;Name=FBgn0260768.1;Dir=sensecoverage=94.4;identity=98.8;matches=249;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015031
Chr2	stalkie_big_nohaplotig	exon	15312075	15312174	99	-	.	Parent=FBgn0260768.1.mrna2;Target=FBgn0260768.1 168 267 +
Chr2	stalkie_big_nohaplotig	exon	15312892	15313043	98	-	.	Parent=FBgn0260768.1.mrna2;Target=FBgn0260768.1 16 167 +
Chr2	stalkie_big_nohaplotig	CDS	15312075	15312174	.	-	1	Parent=FBgn0260768.1.mrna2;Target=FBgn0260768.1 168 267 +
Chr2	stalkie_big_nohaplotig	CDS	15312892	15313043	.	-	0	Parent=FBgn0260768.1.mrna2;Target=FBgn0260768.1 16 167 +
Chr2	gffcl	locus	15322347	15323129	.	-	.	ID=RLOC_00015032;geneIDs=comp154620_c0_seq1.path1;transcripts=comp154620_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15322347	15323129	.	-	.	ID=comp154620_c0_seq1.mrna1;geneID=comp154620_c0_seq1.path1;Name=comp154620_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=730;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015032
Chr2	stalkie_big_nohaplotig	exon	15322347	15322990	100	-	.	Parent=comp154620_c0_seq1.mrna1;Target=comp154620_c0_seq1 87 730 +
Chr2	stalkie_big_nohaplotig	exon	15323044	15323129	100	-	.	Parent=comp154620_c0_seq1.mrna1;Target=comp154620_c0_seq1 1 86 +
Chr2	stalkie_big_nohaplotig	CDS	15322496	15322990	.	-	0	Parent=comp154620_c0_seq1.mrna1;Target=comp154620_c0_seq1 87 581 +
Chr2	stalkie_big_nohaplotig	CDS	15323044	15323109	.	-	0	Parent=comp154620_c0_seq1.mrna1;Target=comp154620_c0_seq1 21 86 +
Chr2	gffcl	locus	15332504	15338634	.	-	.	ID=RLOC_00015033;geneIDs=FBgn0034758.1.path1,comp135895_c0_seq1.path1;transcripts=comp135895_c0_seq1.mrna1,FBgn0034758.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15332504	15336167	.	-	.	ID=comp135895_c0_seq1.mrna1;geneID=comp135895_c0_seq1.path1;Name=comp135895_c0_seq1;Dir=sensecoverage=98.4;identity=99.3;matches=1001;mismatches=6;indels=1;unknowns=0;locus=RLOC_00015033
Chr2	stalkie_big_nohaplotig	exon	15332504	15332818	100	-	.	Parent=comp135895_c0_seq1.mrna1;Target=comp135895_c0_seq1 694 1008 +
Chr2	stalkie_big_nohaplotig	exon	15335476	15336167	98	-	.	Parent=comp135895_c0_seq1.mrna1;Target=comp135895_c0_seq1 1 693 +
Chr2	stalkie_big_nohaplotig	CDS	15332716	15332818	.	-	1	Parent=comp135895_c0_seq1.mrna1;Target=comp135895_c0_seq1 694 796 +
Chr2	stalkie_big_nohaplotig	CDS	15335476	15335765	.	-	0	Parent=comp135895_c0_seq1.mrna1;Target=comp135895_c0_seq1 404 693 +
Chr2	stalkie_big_nohaplotig	mRNA	15332719	15338634	.	-	.	ID=FBgn0034758.1.mrna1;geneID=FBgn0034758.1.path1;Name=FBgn0034758.1;Dir=sensecoverage=100.0;identity=99.7;matches=362;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015033
Chr2	stalkie_big_nohaplotig	exon	15332719	15332818	100	-	.	Parent=FBgn0034758.1.mrna1;Target=FBgn0034758.1 264 363 +
Chr2	stalkie_big_nohaplotig	exon	15338372	15338634	99	-	.	Parent=FBgn0034758.1.mrna1;Target=FBgn0034758.1 1 263 +
Chr2	stalkie_big_nohaplotig	CDS	15332719	15332818	.	-	1	Parent=FBgn0034758.1.mrna1;Target=FBgn0034758.1 264 363 +
Chr2	stalkie_big_nohaplotig	CDS	15338372	15338634	.	-	0	Parent=FBgn0034758.1.mrna1;Target=FBgn0034758.1 1 263 +
Chr2	gffcl	locus	15348078	15348683	.	+	.	ID=RLOC_00015034;geneIDs=FBgn0263031.1.path1;transcripts=FBgn0263031.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15348078	15348683	.	+	.	ID=FBgn0263031.1.mrna1;geneID=FBgn0263031.1.path1;Name=FBgn0263031.1;Dir=sensecoverage=100.0;identity=99.5;matches=543;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015034
Chr2	stalkie_big_nohaplotig	exon	15348078	15348505	99	+	.	Parent=FBgn0263031.1.mrna1;Target=FBgn0263031.1 1 428 +
Chr2	stalkie_big_nohaplotig	exon	15348566	15348683	100	+	.	Parent=FBgn0263031.1.mrna1;Target=FBgn0263031.1 429 546 +
Chr2	stalkie_big_nohaplotig	CDS	15348078	15348505	.	+	0	Parent=FBgn0263031.1.mrna1;Target=FBgn0263031.1 1 428 +
Chr2	stalkie_big_nohaplotig	CDS	15348566	15348683	.	+	1	Parent=FBgn0263031.1.mrna1;Target=FBgn0263031.1 429 546 +
Chr2	gffcl	locus	15365858	15366751	.	+	.	ID=RLOC_00015035;geneIDs=comp161565_c0_seq1.path3;transcripts=comp161565_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	15365858	15366751	.	+	.	ID=comp161565_c0_seq1.mrna3;geneID=comp161565_c0_seq1.path3;Name=comp161565_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=618;mismatches=13;indels=0;unknowns=0;Target=comp161565_c0_seq1 272 3 .;locus=RLOC_00015035
Chr2	stalkie_big_nohaplotig	exon	15365858	15366272	97	+	.	Parent=comp161565_c0_seq1.mrna3;Target=comp161565_c0_seq1 415 1 .
Chr2	stalkie_big_nohaplotig	exon	15366536	15366751	98	+	.	Parent=comp161565_c0_seq1.mrna3;Target=comp161565_c0_seq1 631 416 .
Chr2	stalkie_big_nohaplotig	CDS	15365860	15366129	.	+	0	Parent=comp161565_c0_seq1.mrna3
Chr2	gffcl	locus	15391858	15392509	.	-	.	ID=RLOC_00015036;geneIDs=FBgn0033598.1.path1;transcripts=FBgn0033598.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15391858	15392509	.	-	.	ID=FBgn0033598.1.mrna1;geneID=FBgn0033598.1.path1;Name=FBgn0033598.1;Dir=sensecoverage=99.7;identity=99.8;matches=585;mismatches=0;indels=1;unknowns=0;locus=RLOC_00015036
Chr2	stalkie_big_nohaplotig	exon	15391858	15392415	99	-	.	Parent=FBgn0033598.1.mrna1;Target=FBgn0033598.1 28 586 +
Chr2	stalkie_big_nohaplotig	exon	15392483	15392509	100	-	.	Parent=FBgn0033598.1.mrna1;Target=FBgn0033598.1 1 27 +
Chr2	stalkie_big_nohaplotig	CDS	15391859	15392415	.	-	0	Parent=FBgn0033598.1.mrna1;Target=FBgn0033598.1 28 585 +
Chr2	stalkie_big_nohaplotig	CDS	15392483	15392509	.	-	0	Parent=FBgn0033598.1.mrna1;Target=FBgn0033598.1 1 27 +
Chr2	gffcl	locus	15396209	15397902	.	-	.	ID=RLOC_00015037;geneIDs=FBgn0033600.1.path1;transcripts=FBgn0033600.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15396209	15397902	.	-	.	ID=FBgn0033600.1.mrna1;geneID=FBgn0033600.1.path1;Name=FBgn0033600.1;Dir=sensecoverage=96.8;identity=100.0;matches=491;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015037
Chr2	stalkie_big_nohaplotig	exon	15396209	15396610	100	-	.	Parent=FBgn0033600.1.mrna1;Target=FBgn0033600.1 106 507 +
Chr2	stalkie_big_nohaplotig	exon	15397814	15397902	100	-	.	Parent=FBgn0033600.1.mrna1;Target=FBgn0033600.1 17 105 +
Chr2	stalkie_big_nohaplotig	CDS	15396209	15396610	.	-	0	Parent=FBgn0033600.1.mrna1;Target=FBgn0033600.1 106 507 +
Chr2	stalkie_big_nohaplotig	CDS	15397814	15397900	.	-	0	Parent=FBgn0033600.1.mrna1;Target=FBgn0033600.1 19 105 +
Chr2	gffcl	locus	15423745	15424922	.	+	.	ID=RLOC_00015038;geneIDs=comp138057_c1_seq1.path1;transcripts=comp138057_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15423745	15424922	.	+	.	ID=comp138057_c1_seq1.mrna1;geneID=comp138057_c1_seq1.path1;Name=comp138057_c1_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=594;mismatches=4;indels=0;unknowns=0;locus=RLOC_00015038
Chr2	stalkie_big_nohaplotig	exon	15423745	15423866	99	+	.	Parent=comp138057_c1_seq1.mrna1;Target=comp138057_c1_seq1 477 598 -
Chr2	stalkie_big_nohaplotig	exon	15424372	15424627	100	+	.	Parent=comp138057_c1_seq1.mrna1;Target=comp138057_c1_seq1 221 476 -
Chr2	stalkie_big_nohaplotig	exon	15424703	15424922	98	+	.	Parent=comp138057_c1_seq1.mrna1;Target=comp138057_c1_seq1 1 220 -
Chr2	stalkie_big_nohaplotig	CDS	15423747	15423866	.	+	0	Parent=comp138057_c1_seq1.mrna1;Target=comp138057_c1_seq1 477 596 .
Chr2	stalkie_big_nohaplotig	CDS	15424372	15424627	.	+	0	Parent=comp138057_c1_seq1.mrna1;Target=comp138057_c1_seq1 221 476 .
Chr2	stalkie_big_nohaplotig	CDS	15424703	15424920	.	+	2	Parent=comp138057_c1_seq1.mrna1;Target=comp138057_c1_seq1 3 220 .
Chr2	gffcl	locus	15430812	15431446	.	-	.	ID=RLOC_00015039;geneIDs=comp121591_c1_seq1.path1;transcripts=comp121591_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15430812	15431446	.	-	.	ID=comp121591_c1_seq1.mrna1;geneID=comp121591_c1_seq1.path1;Name=comp121591_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=635;mismatches=0;indels=0;unknowns=0;Target=comp121591_c1_seq1 635 1 .;CDS_Target=comp121591_c1_seq1 259 2 .;locus=RLOC_00015039
Chr2	stalkie_big_nohaplotig	exon	15430812	15431446	100	-	.	Parent=comp121591_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	15431188	15431445	.	-	0	Parent=comp121591_c1_seq1.mrna1
Chr2	gffcl	locus	15431675	15432894	.	-	.	ID=RLOC_00015040;geneIDs=FBgn0033603.path1,comp114284_c0_seq1.path1;transcripts=FBgn0033603.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15431834	15432894	.	-	.	ID=FBgn0033603.mrna1;geneID=FBgn0033603.path1;Name=FBgn0033603;Dir=sensecoverage=98.0;identity=97.8;matches=981;mismatches=22;indels=0;unknowns=0;locus=RLOC_00015040
Chr2	stalkie_big_nohaplotig	exon	15431834	15432210	95	-	.	Parent=FBgn0033603.mrna1;Target=FBgn0033603 647 1023 +
Chr2	stalkie_big_nohaplotig	exon	15432269	15432894	99	-	.	Parent=FBgn0033603.mrna1;Target=FBgn0033603 21 646 +
Chr2	stalkie_big_nohaplotig	CDS	15431834	15432210	.	-	2	Parent=FBgn0033603.mrna1;Target=FBgn0033603 647 1023 +
Chr2	stalkie_big_nohaplotig	CDS	15432269	15432893	.	-	0	Parent=FBgn0033603.mrna1;Target=FBgn0033603 22 646 +
Chr2	gffcl	locus	15477196	15478444	.	-	.	ID=RLOC_00015042;geneIDs=FBgn0035059.1.path1;transcripts=FBgn0035059.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15477196	15478444	.	-	.	ID=FBgn0035059.1.mrna1;geneID=FBgn0035059.1.path1;Name=FBgn0035059.1;Dir=sensecoverage=100.0;identity=99.7;matches=948;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015042
Chr2	stalkie_big_nohaplotig	exon	15477196	15477308	100	-	.	Parent=FBgn0035059.1.mrna1;Target=FBgn0035059.1 839 951 +
Chr2	stalkie_big_nohaplotig	exon	15477380	15477676	99	-	.	Parent=FBgn0035059.1.mrna1;Target=FBgn0035059.1 542 838 +
Chr2	stalkie_big_nohaplotig	exon	15477904	15478444	99	-	.	Parent=FBgn0035059.1.mrna1;Target=FBgn0035059.1 1 541 +
Chr2	stalkie_big_nohaplotig	CDS	15477196	15477308	.	-	2	Parent=FBgn0035059.1.mrna1;Target=FBgn0035059.1 839 951 +
Chr2	stalkie_big_nohaplotig	CDS	15477380	15477676	.	-	2	Parent=FBgn0035059.1.mrna1;Target=FBgn0035059.1 542 838 +
Chr2	stalkie_big_nohaplotig	CDS	15477904	15478444	.	-	0	Parent=FBgn0035059.1.mrna1;Target=FBgn0035059.1 1 541 +
Chr2	gffcl	locus	15479776	15480142	.	+	.	ID=RLOC_00015043;geneIDs=FBgn0040666.1.path1;transcripts=FBgn0040666.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15479776	15480142	.	+	.	ID=FBgn0040666.1.mrna1;geneID=FBgn0040666.1.path1;Name=FBgn0040666.1;Dir=indeterminatecoverage=99.5;identity=99.2;matches=364;mismatches=3;indels=0;unknowns=0;Target=FBgn0040666.1 369 3 .;CDS_Target=FBgn0040666.1 369 4 .;locus=RLOC_00015043
Chr2	stalkie_big_nohaplotig	exon	15479776	15480142	99	+	.	Parent=FBgn0040666.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	15479777	15480142	.	+	0	Parent=FBgn0040666.1.mrna1
Chr2	gffcl	locus	15480240	15484775	.	-	.	ID=RLOC_00015044;geneIDs=FBgn0035057.1.path1;transcripts=FBgn0035057.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15480240	15484775	.	-	.	ID=FBgn0035057.1.mrna1;geneID=FBgn0035057.1.path1;Name=FBgn0035057.1;Dir=sensecoverage=100.0;identity=99.8;matches=1698;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015044
Chr2	stalkie_big_nohaplotig	exon	15480240	15480662	100	-	.	Parent=FBgn0035057.1.mrna1;Target=FBgn0035057.1 1279 1701 +
Chr2	stalkie_big_nohaplotig	exon	15480724	15481899	99	-	.	Parent=FBgn0035057.1.mrna1;Target=FBgn0035057.1 103 1278 +
Chr2	stalkie_big_nohaplotig	exon	15484674	15484775	100	-	.	Parent=FBgn0035057.1.mrna1;Target=FBgn0035057.1 1 102 +
Chr2	stalkie_big_nohaplotig	CDS	15480240	15480662	.	-	0	Parent=FBgn0035057.1.mrna1;Target=FBgn0035057.1 1279 1701 +
Chr2	stalkie_big_nohaplotig	CDS	15480724	15481899	.	-	0	Parent=FBgn0035057.1.mrna1;Target=FBgn0035057.1 103 1278 +
Chr2	stalkie_big_nohaplotig	CDS	15484674	15484775	.	-	0	Parent=FBgn0035057.1.mrna1;Target=FBgn0035057.1 1 102 +
Chr2	gffcl	locus	15502193	15503325	.	-	.	ID=RLOC_00015045;geneIDs=FBgn0031491.1.path1;transcripts=FBgn0031491.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15502193	15503325	.	-	.	ID=FBgn0031491.1.mrna1;geneID=FBgn0031491.1.path1;Name=FBgn0031491.1;Dir=sensecoverage=100.0;identity=99.2;matches=1054;mismatches=8;indels=0;unknowns=0;locus=RLOC_00015045
Chr2	stalkie_big_nohaplotig	exon	15502193	15502772	99	-	.	Parent=FBgn0031491.1.mrna1;Target=FBgn0031491.1 483 1062 +
Chr2	stalkie_big_nohaplotig	exon	15502844	15503325	99	-	.	Parent=FBgn0031491.1.mrna1;Target=FBgn0031491.1 1 482 +
Chr2	stalkie_big_nohaplotig	CDS	15502193	15502772	.	-	1	Parent=FBgn0031491.1.mrna1;Target=FBgn0031491.1 483 1062 +
Chr2	stalkie_big_nohaplotig	CDS	15502844	15503325	.	-	0	Parent=FBgn0031491.1.mrna1;Target=FBgn0031491.1 1 482 +
Chr2	gffcl	locus	15510748	15511779	.	+	.	ID=RLOC_00015046;geneIDs=Dp_FBgn0244711.1.path7;transcripts=Dp_FBgn0244711.1.mrna7
Chr2	stalkie_big_nohaplotig	mRNA	15510748	15511779	.	+	.	ID=Dp_FBgn0244711.1.mrna7;geneID=Dp_FBgn0244711.1.path7;Name=Dp_FBgn0244711.1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1020;mismatches=12;indels=0;unknowns=0;Target=Dp_FBgn0244711.1 1032 1 .;locus=RLOC_00015046
Chr2	stalkie_big_nohaplotig	exon	15510748	15511779	98	+	.	Parent=Dp_FBgn0244711.1.mrna7
Chr2	stalkie_big_nohaplotig	CDS	15510748	15511779	.	+	0	Parent=Dp_FBgn0244711.1.mrna7
Chr2	gffcl	locus	15515490	15679498	.	-	.	ID=RLOC_00015047;geneIDs=FBgn0033192.1.path1,FBgn0050421.1.path1,comp161520_c0_seq1.path1;transcripts=FBgn0050421.1.mrna1,FBgn0033192.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15517183	15675288	.	-	.	ID=FBgn0050421.1.mrna1;geneID=FBgn0050421.1.path1;Name=FBgn0050421.1;Dir=indeterminatecoverage=90.9;identity=99.2;matches=3707;mismatches=14;indels=16;unknowns=0;Target=FBgn0050421.1 1140 1139 .;locus=RLOC_00015047
Chr2	stalkie_big_nohaplotig	exon	15517183	15517230	100	-	.	Parent=FBgn0050421.1.mrna1;Target=FBgn0050421.1 5334 5287 .
Chr2	stalkie_big_nohaplotig	exon	15517323	15518344	99	-	.	Parent=FBgn0050421.1.mrna1;Target=FBgn0050421.1 5286 4265 .
Chr2	stalkie_big_nohaplotig	exon	15518404	15520294	99	-	.	Parent=FBgn0050421.1.mrna1;Target=FBgn0050421.1 4264 2374 .
Chr2	stalkie_big_nohaplotig	exon	15521002	15521136	100	-	.	Parent=FBgn0050421.1.mrna1;Target=FBgn0050421.1 2373 2239 .
Chr2	stalkie_big_nohaplotig	exon	15521209	15521343	100	-	.	Parent=FBgn0050421.1.mrna1;Target=FBgn0050421.1 2238 2104 .
Chr2	stalkie_big_nohaplotig	exon	15521440	15521475	100	-	.	Parent=FBgn0050421.1.mrna1;Target=FBgn0050421.1 2103 2068 .
Chr2	stalkie_big_nohaplotig	exon	15578202	15578375	100	-	.	Parent=FBgn0050421.1.mrna1;Target=FBgn0050421.1 2067 1894 .
Chr2	stalkie_big_nohaplotig	exon	15610087	15610285	100	-	.	Parent=FBgn0050421.1.mrna1;Target=FBgn0050421.1 1893 1695 .
Chr2	stalkie_big_nohaplotig	exon	15631226	15631238	92	-	.	Parent=FBgn0050421.1.mrna1;Target=FBgn0050421.1 1694 1683 .
Chr2	stalkie_big_nohaplotig	exon	15635762	15635768	85	-	.	Parent=FBgn0050421.1.mrna1;Target=FBgn0050421.1 1682 1676 .
Chr2	stalkie_big_nohaplotig	exon	15647008	15647017	100	-	.	Parent=FBgn0050421.1.mrna1;Target=FBgn0050421.1 1140 1131 .
Chr2	stalkie_big_nohaplotig	exon	15663536	15663549	61	-	.	Parent=FBgn0050421.1.mrna1;Target=FBgn0050421.1 1127 1107 .
Chr2	stalkie_big_nohaplotig	exon	15668644	15668651	100	-	.	Parent=FBgn0050421.1.mrna1;Target=FBgn0050421.1 1009 1002 .
Chr2	stalkie_big_nohaplotig	exon	15668727	15668736	100	-	.	Parent=FBgn0050421.1.mrna1;Target=FBgn0050421.1 918 909 .
Chr2	stalkie_big_nohaplotig	exon	15668819	15668826	100	-	.	Parent=FBgn0050421.1.mrna1;Target=FBgn0050421.1 835 828 .
Chr2	stalkie_big_nohaplotig	exon	15675277	15675288	78	-	.	Parent=FBgn0050421.1.mrna1;Target=FBgn0050421.1 499 486 .
Chr2	stalkie_big_nohaplotig	CDS	15647008	15647009	.	-	0	Parent=FBgn0050421.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15670853	15679498	.	-	.	ID=FBgn0033192.1.mrna1;geneID=FBgn0033192.1.path1;Name=FBgn0033192.1;Dir=sensecoverage=100.0;identity=99.3;matches=4201;mismatches=29;indels=0;unknowns=0;locus=RLOC_00015047
Chr2	stalkie_big_nohaplotig	exon	15670853	15671188	98	-	.	Parent=FBgn0033192.1.mrna1;Target=FBgn0033192.1 3895 4230 +
Chr2	stalkie_big_nohaplotig	exon	15671532	15671677	99	-	.	Parent=FBgn0033192.1.mrna1;Target=FBgn0033192.1 3749 3894 +
Chr2	stalkie_big_nohaplotig	exon	15671738	15671864	99	-	.	Parent=FBgn0033192.1.mrna1;Target=FBgn0033192.1 3622 3748 +
Chr2	stalkie_big_nohaplotig	exon	15671971	15672130	99	-	.	Parent=FBgn0033192.1.mrna1;Target=FBgn0033192.1 3462 3621 +
Chr2	stalkie_big_nohaplotig	exon	15672200	15672383	98	-	.	Parent=FBgn0033192.1.mrna1;Target=FBgn0033192.1 3278 3461 +
Chr2	stalkie_big_nohaplotig	exon	15672665	15672991	99	-	.	Parent=FBgn0033192.1.mrna1;Target=FBgn0033192.1 2951 3277 +
Chr2	stalkie_big_nohaplotig	exon	15673081	15673579	98	-	.	Parent=FBgn0033192.1.mrna1;Target=FBgn0033192.1 2452 2950 +
Chr2	stalkie_big_nohaplotig	exon	15673635	15673964	99	-	.	Parent=FBgn0033192.1.mrna1;Target=FBgn0033192.1 2122 2451 +
Chr2	stalkie_big_nohaplotig	exon	15674029	15674198	100	-	.	Parent=FBgn0033192.1.mrna1;Target=FBgn0033192.1 1952 2121 +
Chr2	stalkie_big_nohaplotig	exon	15674458	15676099	99	-	.	Parent=FBgn0033192.1.mrna1;Target=FBgn0033192.1 310 1951 +
Chr2	stalkie_big_nohaplotig	exon	15679190	15679498	99	-	.	Parent=FBgn0033192.1.mrna1;Target=FBgn0033192.1 1 309 +
Chr2	stalkie_big_nohaplotig	CDS	15670853	15671188	.	-	0	Parent=FBgn0033192.1.mrna1;Target=FBgn0033192.1 3895 4230 +
Chr2	stalkie_big_nohaplotig	CDS	15671532	15671677	.	-	2	Parent=FBgn0033192.1.mrna1;Target=FBgn0033192.1 3749 3894 +
Chr2	stalkie_big_nohaplotig	CDS	15671738	15671864	.	-	0	Parent=FBgn0033192.1.mrna1;Target=FBgn0033192.1 3622 3748 +
Chr2	stalkie_big_nohaplotig	CDS	15671971	15672130	.	-	1	Parent=FBgn0033192.1.mrna1;Target=FBgn0033192.1 3462 3621 +
Chr2	stalkie_big_nohaplotig	CDS	15672200	15672383	.	-	2	Parent=FBgn0033192.1.mrna1;Target=FBgn0033192.1 3278 3461 +
Chr2	stalkie_big_nohaplotig	CDS	15672665	15672991	.	-	2	Parent=FBgn0033192.1.mrna1;Target=FBgn0033192.1 2951 3277 +
Chr2	stalkie_big_nohaplotig	CDS	15673081	15673579	.	-	0	Parent=FBgn0033192.1.mrna1;Target=FBgn0033192.1 2452 2950 +
Chr2	stalkie_big_nohaplotig	CDS	15673635	15673964	.	-	0	Parent=FBgn0033192.1.mrna1;Target=FBgn0033192.1 2122 2451 +
Chr2	stalkie_big_nohaplotig	CDS	15674029	15674198	.	-	2	Parent=FBgn0033192.1.mrna1;Target=FBgn0033192.1 1952 2121 +
Chr2	stalkie_big_nohaplotig	CDS	15674458	15676099	.	-	0	Parent=FBgn0033192.1.mrna1;Target=FBgn0033192.1 310 1951 +
Chr2	stalkie_big_nohaplotig	CDS	15679190	15679498	.	-	0	Parent=FBgn0033192.1.mrna1;Target=FBgn0033192.1 1 309 +
Chr2	gffcl	locus	15559762	15565375	.	+	.	ID=RLOC_00015048;geneIDs=comp114471_c0_seq1.path1,comp161570_c5_seq1.path1;transcripts=comp161570_c5_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15559762	15564507	.	+	.	ID=comp161570_c5_seq1.mrna1;geneID=comp161570_c5_seq1.path1;Name=comp161570_c5_seq1;Dir=antisensecoverage=68.1;identity=99.3;matches=3607;mismatches=16;indels=9;unknowns=0;Target=comp161570_c5_seq1 2666 3634 .;locus=RLOC_00015048
Chr2	stalkie_big_nohaplotig	exon	15559762	15560883	99	+	.	Parent=comp161570_c5_seq1.mrna1;Target=comp161570_c5_seq1 2512 3634 -
Chr2	stalkie_big_nohaplotig	exon	15561726	15562667	99	+	.	Parent=comp161570_c5_seq1.mrna1;Target=comp161570_c5_seq1 1570 2511 -
Chr2	stalkie_big_nohaplotig	exon	15562865	15563247	99	+	.	Parent=comp161570_c5_seq1.mrna1;Target=comp161570_c5_seq1 1187 1569 -
Chr2	stalkie_big_nohaplotig	exon	15563332	15564507	99	+	.	Parent=comp161570_c5_seq1.mrna1;Target=comp161570_c5_seq1 3 1186 -
Chr2	stalkie_big_nohaplotig	CDS	15559762	15560729	.	+	0	Parent=comp161570_c5_seq1.mrna1
Chr2	gffcl	locus	15565832	15566478	.	-	.	ID=RLOC_00015049;geneIDs=comp117141_c0_seq1.path1;transcripts=comp117141_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15565832	15566478	.	-	.	ID=comp117141_c0_seq1.mrna1;geneID=comp117141_c0_seq1.path1;Name=comp117141_c0_seq1;Dir=indeterminatecoverage=98.9;identity=81.7;matches=490;mismatches=28;indels=82;unknowns=0;Target=comp117141_c0_seq1 281 138 .;locus=RLOC_00015049
Chr2	stalkie_big_nohaplotig	exon	15565832	15566013	69	-	.	Parent=comp117141_c0_seq1.mrna1;Target=comp117141_c0_seq1 558 399 .
Chr2	stalkie_big_nohaplotig	exon	15566099	15566478	88	-	.	Parent=comp117141_c0_seq1.mrna1;Target=comp117141_c0_seq1 398 3 .
Chr2	stalkie_big_nohaplotig	CDS	15566216	15566339	.	-	0	Parent=comp117141_c0_seq1.mrna1
Chr2	gffcl	locus	15567931	15568269	.	+	.	ID=RLOC_00015050;geneIDs=comp1192455_c0_seq1.path1;transcripts=comp1192455_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15567931	15568269	.	+	.	ID=comp1192455_c0_seq1.mrna1;geneID=comp1192455_c0_seq1.path1;Name=comp1192455_c0_seq1;Dir=indeterminatecoverage=93.9;identity=100.0;matches=339;mismatches=0;indels=0;unknowns=0;Target=comp1192455_c0_seq1 361 23 .;CDS_Target=comp1192455_c0_seq1 105 25 .;locus=RLOC_00015050
Chr2	stalkie_big_nohaplotig	exon	15567931	15568269	100	+	.	Parent=comp1192455_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	15567933	15568013	.	+	0	Parent=comp1192455_c0_seq1.mrna1
Chr2	gffcl	locus	15569262	15569635	.	+	.	ID=RLOC_00015051;geneIDs=comp115661_c1_seq1.path1;transcripts=comp115661_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15569262	15569635	.	+	.	ID=comp115661_c1_seq1.mrna1;geneID=comp115661_c1_seq1.path1;Name=comp115661_c1_seq1;Dir=indeterminatecoverage=90.1;identity=100.0;matches=374;mismatches=0;indels=0;unknowns=0;Target=comp115661_c1_seq1 413 40 .;CDS_Target=comp115661_c1_seq1 108 40 .;locus=RLOC_00015051
Chr2	stalkie_big_nohaplotig	exon	15569262	15569635	100	+	.	Parent=comp115661_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	15569262	15569330	.	+	0	Parent=comp115661_c1_seq1.mrna1
Chr2	gffcl	locus	15572733	15574960	.	-	.	ID=RLOC_00015052;geneIDs=FBgn0033392.1.path1;transcripts=FBgn0033392.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15572733	15574960	.	-	.	ID=FBgn0033392.1.mrna1;geneID=FBgn0033392.1.path1;Name=FBgn0033392.1;Dir=sensecoverage=100.0;identity=98.8;matches=1929;mismatches=24;indels=0;unknowns=0;locus=RLOC_00015052
Chr2	stalkie_big_nohaplotig	exon	15572733	15573027	99	-	.	Parent=FBgn0033392.1.mrna1;Target=FBgn0033392.1 1659 1953 +
Chr2	stalkie_big_nohaplotig	exon	15573097	15573287	98	-	.	Parent=FBgn0033392.1.mrna1;Target=FBgn0033392.1 1468 1658 +
Chr2	stalkie_big_nohaplotig	exon	15573355	15574428	98	-	.	Parent=FBgn0033392.1.mrna1;Target=FBgn0033392.1 394 1467 +
Chr2	stalkie_big_nohaplotig	exon	15574487	15574762	98	-	.	Parent=FBgn0033392.1.mrna1;Target=FBgn0033392.1 118 393 +
Chr2	stalkie_big_nohaplotig	exon	15574844	15574960	99	-	.	Parent=FBgn0033392.1.mrna1;Target=FBgn0033392.1 1 117 +
Chr2	stalkie_big_nohaplotig	CDS	15572733	15573027	.	-	1	Parent=FBgn0033392.1.mrna1;Target=FBgn0033392.1 1659 1953 +
Chr2	stalkie_big_nohaplotig	CDS	15573097	15573287	.	-	0	Parent=FBgn0033392.1.mrna1;Target=FBgn0033392.1 1468 1658 +
Chr2	stalkie_big_nohaplotig	CDS	15573355	15574428	.	-	0	Parent=FBgn0033392.1.mrna1;Target=FBgn0033392.1 394 1467 +
Chr2	stalkie_big_nohaplotig	CDS	15574487	15574762	.	-	0	Parent=FBgn0033392.1.mrna1;Target=FBgn0033392.1 118 393 +
Chr2	stalkie_big_nohaplotig	CDS	15574844	15574960	.	-	0	Parent=FBgn0033392.1.mrna1;Target=FBgn0033392.1 1 117 +
Chr2	gffcl	locus	15616955	15617617	.	+	.	ID=RLOC_00015053;geneIDs=comp87454_c0_seq1.path1;transcripts=comp87454_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15616955	15617617	.	+	.	ID=comp87454_c0_seq1.mrna1;geneID=comp87454_c0_seq1.path1;Name=comp87454_c0_seq1;Dir=indeterminatecoverage=96.4;identity=99.5;matches=660;mismatches=3;indels=0;unknowns=0;Target=comp87454_c0_seq1 664 2 .;CDS_Target=comp87454_c0_seq1 430 338 .;locus=RLOC_00015053
Chr2	stalkie_big_nohaplotig	exon	15616955	15617617	99	+	.	Parent=comp87454_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	15617291	15617383	.	+	0	Parent=comp87454_c0_seq1.mrna1
Chr2	gffcl	locus	15662128	15662681	.	+	.	ID=RLOC_00015054;geneIDs=FBgn0004132.1.path1;transcripts=FBgn0004132.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15662128	15662681	.	+	.	ID=FBgn0004132.1.mrna1;geneID=FBgn0004132.1.path1;Name=FBgn0004132.1;Dir=sensecoverage=99.4;identity=99.0;matches=493;mismatches=5;indels=0;unknowns=0;locus=RLOC_00015054
Chr2	stalkie_big_nohaplotig	exon	15662128	15662223	98	+	.	Parent=FBgn0004132.1.mrna1;Target=FBgn0004132.1 4 99 +
Chr2	stalkie_big_nohaplotig	exon	15662280	15662681	99	+	.	Parent=FBgn0004132.1.mrna1;Target=FBgn0004132.1 100 501 +
Chr2	stalkie_big_nohaplotig	CDS	15662128	15662223	.	+	0	Parent=FBgn0004132.1.mrna1;Target=FBgn0004132.1 4 99 +
Chr2	stalkie_big_nohaplotig	CDS	15662280	15662681	.	+	0	Parent=FBgn0004132.1.mrna1;Target=FBgn0004132.1 100 501 +
Chr2	gffcl	locus	15663007	15663984	.	+	.	ID=RLOC_00015055;geneIDs=FBgn0050499.1.path1;transcripts=FBgn0050499.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15663007	15663984	.	+	.	ID=FBgn0050499.1.mrna1;geneID=FBgn0050499.1.path1;Name=FBgn0050499.1;Dir=sensecoverage=100.0;identity=99.3;matches=751;mismatches=5;indels=0;unknowns=0;locus=RLOC_00015055
Chr2	stalkie_big_nohaplotig	exon	15663007	15663282	98	+	.	Parent=FBgn0050499.1.mrna1;Target=FBgn0050499.1 1 276 +
Chr2	stalkie_big_nohaplotig	exon	15663344	15663529	99	+	.	Parent=FBgn0050499.1.mrna1;Target=FBgn0050499.1 277 462 +
Chr2	stalkie_big_nohaplotig	exon	15663631	15663822	99	+	.	Parent=FBgn0050499.1.mrna1;Target=FBgn0050499.1 463 654 +
Chr2	stalkie_big_nohaplotig	exon	15663883	15663984	100	+	.	Parent=FBgn0050499.1.mrna1;Target=FBgn0050499.1 655 756 +
Chr2	stalkie_big_nohaplotig	CDS	15663007	15663282	.	+	0	Parent=FBgn0050499.1.mrna1;Target=FBgn0050499.1 1 276 +
Chr2	stalkie_big_nohaplotig	CDS	15663344	15663529	.	+	0	Parent=FBgn0050499.1.mrna1;Target=FBgn0050499.1 277 462 +
Chr2	stalkie_big_nohaplotig	CDS	15663631	15663822	.	+	0	Parent=FBgn0050499.1.mrna1;Target=FBgn0050499.1 463 654 +
Chr2	stalkie_big_nohaplotig	CDS	15663883	15663984	.	+	0	Parent=FBgn0050499.1.mrna1;Target=FBgn0050499.1 655 756 +
Chr2	gffcl	locus	15665612	15665923	.	-	.	ID=RLOC_00015056;geneIDs=comp147486_c0_seq1.path1;transcripts=comp147486_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15665612	15665923	.	-	.	ID=comp147486_c0_seq1.mrna1;geneID=comp147486_c0_seq1.path1;Name=comp147486_c0_seq1;Dir=indeterminatecoverage=24.0;identity=98.4;matches=308;mismatches=4;indels=1;unknowns=0;Target=comp147486_c0_seq1 1081 769 .;CDS_Target=comp147486_c0_seq1 867 823 .;locus=RLOC_00015056
Chr2	stalkie_big_nohaplotig	exon	15665612	15665923	98	-	.	Parent=comp147486_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	15665825	15665869	.	-	0	Parent=comp147486_c0_seq1.mrna1
Chr2	gffcl	locus	15669395	15693548	.	-	.	ID=RLOC_00015057;geneIDs=comp50957_c0_seq1.path1;transcripts=comp50957_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15669395	15693548	.	-	.	ID=comp50957_c0_seq1.mrna1;geneID=comp50957_c0_seq1.path1;Name=comp50957_c0_seq1;Dir=indeterminatecoverage=83.1;identity=100.0;matches=439;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015057
Chr2	stalkie_big_nohaplotig	exon	15669395	15669810	100	-	.	Parent=comp50957_c0_seq1.mrna1;Target=comp50957_c0_seq1 528 113 .
Chr2	stalkie_big_nohaplotig	exon	15680528	15680531	100	-	.	Parent=comp50957_c0_seq1.mrna1;Target=comp50957_c0_seq1 112 109 .
Chr2	stalkie_big_nohaplotig	exon	15687589	15687592	100	-	.	Parent=comp50957_c0_seq1.mrna1;Target=comp50957_c0_seq1 108 105 .
Chr2	stalkie_big_nohaplotig	exon	15691010	15691018	100	-	.	Parent=comp50957_c0_seq1.mrna1;Target=comp50957_c0_seq1 104 96 .
Chr2	stalkie_big_nohaplotig	exon	15693543	15693548	100	-	.	Parent=comp50957_c0_seq1.mrna1;Target=comp50957_c0_seq1 95 90 .
Chr2	stalkie_big_nohaplotig	CDS	15669739	15669810	.	-	0	Parent=comp50957_c0_seq1.mrna1;Target=comp50957_c0_seq1 184 113 .
Chr2	stalkie_big_nohaplotig	CDS	15680528	15680531	.	-	1	Parent=comp50957_c0_seq1.mrna1;Target=comp50957_c0_seq1 112 109 .
Chr2	stalkie_big_nohaplotig	CDS	15687589	15687592	.	-	2	Parent=comp50957_c0_seq1.mrna1;Target=comp50957_c0_seq1 108 105 .
Chr2	stalkie_big_nohaplotig	CDS	15691010	15691018	.	-	2	Parent=comp50957_c0_seq1.mrna1;Target=comp50957_c0_seq1 104 96 .
Chr2	stalkie_big_nohaplotig	CDS	15693543	15693546	.	-	0	Parent=comp50957_c0_seq1.mrna1;Target=comp50957_c0_seq1 95 92 .
Chr2	gffcl	locus	15734601	15735914	.	-	.	ID=RLOC_00015058;geneIDs=FBgn0032054.1.path1;transcripts=FBgn0032054.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15734601	15735914	.	-	.	ID=FBgn0032054.1.mrna1;geneID=FBgn0032054.1.path1;Name=FBgn0032054.1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1297;mismatches=17;indels=0;unknowns=0;Target=FBgn0032054.1 1314 1 .;locus=RLOC_00015058
Chr2	stalkie_big_nohaplotig	exon	15734601	15735914	98	-	.	Parent=FBgn0032054.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	15734601	15735914	.	-	0	Parent=FBgn0032054.1.mrna1
Chr2	gffcl	locus	15740600	15740986	.	-	.	ID=RLOC_00015060;geneIDs=comp147383_c0_seq1.path1;transcripts=comp147383_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15740600	15740986	.	-	.	ID=comp147383_c0_seq1.mrna1;geneID=comp147383_c0_seq1.path1;Name=comp147383_c0_seq1;Dir=indeterminatecoverage=95.6;identity=97.2;matches=378;mismatches=9;indels=2;unknowns=0;Target=comp147383_c0_seq1 389 1 .;CDS_Target=comp147383_c0_seq1 360 280 .;locus=RLOC_00015060
Chr2	stalkie_big_nohaplotig	exon	15740600	15740986	97	-	.	Parent=comp147383_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	15740629	15740707	.	-	0	Parent=comp147383_c0_seq1.mrna1
Chr2	gffcl	locus	15745984	15748090	.	-	.	ID=RLOC_00015061;geneIDs=FBgn0033401.1.path1;transcripts=FBgn0033401.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15745984	15748090	.	-	.	ID=FBgn0033401.1.mrna1;geneID=FBgn0033401.1.path1;Name=FBgn0033401.1;Dir=sensecoverage=100.0;identity=98.8;matches=1850;mismatches=22;indels=0;unknowns=0;locus=RLOC_00015061
Chr2	stalkie_big_nohaplotig	exon	15745984	15746763	99	-	.	Parent=FBgn0033401.1.mrna1;Target=FBgn0033401.1 1093 1872 +
Chr2	stalkie_big_nohaplotig	exon	15746823	15746983	98	-	.	Parent=FBgn0033401.1.mrna1;Target=FBgn0033401.1 932 1092 +
Chr2	stalkie_big_nohaplotig	exon	15747044	15747249	98	-	.	Parent=FBgn0033401.1.mrna1;Target=FBgn0033401.1 726 931 +
Chr2	stalkie_big_nohaplotig	exon	15747302	15747933	97	-	.	Parent=FBgn0033401.1.mrna1;Target=FBgn0033401.1 94 725 +
Chr2	stalkie_big_nohaplotig	exon	15747998	15748090	97	-	.	Parent=FBgn0033401.1.mrna1;Target=FBgn0033401.1 1 93 +
Chr2	stalkie_big_nohaplotig	CDS	15745984	15746763	.	-	0	Parent=FBgn0033401.1.mrna1;Target=FBgn0033401.1 1093 1872 +
Chr2	stalkie_big_nohaplotig	CDS	15746823	15746983	.	-	2	Parent=FBgn0033401.1.mrna1;Target=FBgn0033401.1 932 1092 +
Chr2	stalkie_big_nohaplotig	CDS	15747044	15747249	.	-	1	Parent=FBgn0033401.1.mrna1;Target=FBgn0033401.1 726 931 +
Chr2	stalkie_big_nohaplotig	CDS	15747302	15747933	.	-	0	Parent=FBgn0033401.1.mrna1;Target=FBgn0033401.1 94 725 +
Chr2	stalkie_big_nohaplotig	CDS	15747998	15748090	.	-	0	Parent=FBgn0033401.1.mrna1;Target=FBgn0033401.1 1 93 +
Chr2	gffcl	locus	15750810	15751909	.	+	.	ID=RLOC_00015062;geneIDs=FBgn0033400.1.path2;transcripts=FBgn0033400.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	15750810	15751909	.	+	.	ID=FBgn0033400.1.mrna2;geneID=FBgn0033400.1.path2;Name=FBgn0033400.1;Dir=sensecoverage=100.0;identity=99.2;matches=946;mismatches=8;indels=0;unknowns=0;locus=RLOC_00015062
Chr2	stalkie_big_nohaplotig	exon	15750810	15750932	98	+	.	Parent=FBgn0033400.1.mrna2;Target=FBgn0033400.1 1 123 +
Chr2	stalkie_big_nohaplotig	exon	15750996	15751705	99	+	.	Parent=FBgn0033400.1.mrna2;Target=FBgn0033400.1 124 833 +
Chr2	stalkie_big_nohaplotig	exon	15751789	15751909	98	+	.	Parent=FBgn0033400.1.mrna2;Target=FBgn0033400.1 834 954 +
Chr2	stalkie_big_nohaplotig	CDS	15750810	15750932	.	+	0	Parent=FBgn0033400.1.mrna2;Target=FBgn0033400.1 1 123 +
Chr2	stalkie_big_nohaplotig	CDS	15750996	15751705	.	+	0	Parent=FBgn0033400.1.mrna2;Target=FBgn0033400.1 124 833 +
Chr2	stalkie_big_nohaplotig	CDS	15751789	15751909	.	+	1	Parent=FBgn0033400.1.mrna2;Target=FBgn0033400.1 834 954 +
Chr2	gffcl	locus	15752822	15756705	.	+	.	ID=RLOC_00015063;geneIDs=comp135425_c0_seq1.path1;transcripts=comp135425_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15752822	15756705	.	+	.	ID=comp135425_c0_seq1.mrna1;geneID=comp135425_c0_seq1.path1;Name=comp135425_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=896;mismatches=3;indels=2;unknowns=0;Target=comp135425_c0_seq1 686 745 .;locus=RLOC_00015063
Chr2	stalkie_big_nohaplotig	exon	15752822	15753478	99	+	.	Parent=comp135425_c0_seq1.mrna1;Target=comp135425_c0_seq1 244 900 -
Chr2	stalkie_big_nohaplotig	exon	15756463	15756705	98	+	.	Parent=comp135425_c0_seq1.mrna1;Target=comp135425_c0_seq1 1 243 -
Chr2	stalkie_big_nohaplotig	CDS	15752977	15753036	.	+	0	Parent=comp135425_c0_seq1.mrna1
Chr2	gffcl	locus	15756849	15756914	.	+	.	ID=RLOC_00015064;geneIDs=FBgn0020621.1.path1;transcripts=FBgn0020621.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15756849	15756914	.	+	.	ID=FBgn0020621.1.mrna1;geneID=FBgn0020621.1.path1;Name=FBgn0020621.1;Dir=indeterminatecoverage=1.9;identity=98.5;matches=65;mismatches=1;indels=0;unknowns=0;Target=FBgn0020621.1 66 1 .;locus=RLOC_00015064
Chr2	stalkie_big_nohaplotig	exon	15756849	15756914	98	+	.	Parent=FBgn0020621.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	15756849	15756914	.	+	0	Parent=FBgn0020621.1.mrna1
Chr2	gffcl	locus	15761289	15762395	.	+	.	ID=RLOC_00015065;geneIDs=FBgn0262515.1.path1;transcripts=FBgn0262515.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15761289	15762395	.	+	.	ID=FBgn0262515.1.mrna1;geneID=FBgn0262515.1.path1;Name=FBgn0262515.1;Dir=sensecoverage=100.0;identity=98.8;matches=969;mismatches=11;indels=1;unknowns=0;locus=RLOC_00015065
Chr2	stalkie_big_nohaplotig	exon	15761289	15761311	100	+	.	Parent=FBgn0262515.1.mrna1;Target=FBgn0262515.1 1 23 +
Chr2	stalkie_big_nohaplotig	exon	15761372	15761636	99	+	.	Parent=FBgn0262515.1.mrna1;Target=FBgn0262515.1 24 289 +
Chr2	stalkie_big_nohaplotig	exon	15761704	15762395	98	+	.	Parent=FBgn0262515.1.mrna1;Target=FBgn0262515.1 290 981 +
Chr2	stalkie_big_nohaplotig	CDS	15761291	15761311	.	+	0	Parent=FBgn0262515.1.mrna1;Target=FBgn0262515.1 3 23 +
Chr2	stalkie_big_nohaplotig	CDS	15761372	15761466	.	+	0	Parent=FBgn0262515.1.mrna1;Target=FBgn0262515.1 24 119 +
Chr2	gffcl	locus	15765268	15774342	.	-	.	ID=RLOC_00015066;geneIDs=comp156287_c0_seq1.path1;transcripts=comp156287_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15765268	15774342	.	-	.	ID=comp156287_c0_seq1.mrna1;geneID=comp156287_c0_seq1.path1;Name=comp156287_c0_seq1;Dir=indeterminatecoverage=98.5;identity=90.4;matches=865;mismatches=52;indels=40;unknowns=0;Target=comp156287_c0_seq1 613 542 .;locus=RLOC_00015066
Chr2	stalkie_big_nohaplotig	exon	15765268	15765838	91	-	.	Parent=comp156287_c0_seq1.mrna1;Target=comp156287_c0_seq1 937 397 .
Chr2	stalkie_big_nohaplotig	exon	15773963	15774342	89	-	.	Parent=comp156287_c0_seq1.mrna1;Target=comp156287_c0_seq1 396 15 .
Chr2	stalkie_big_nohaplotig	CDS	15765622	15765693	.	-	0	Parent=comp156287_c0_seq1.mrna1
Chr2	gffcl	locus	15822576	15826468	.	-	.	ID=RLOC_00015067;geneIDs=comp135425_c0_seq1.path2;transcripts=comp135425_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	15822576	15826468	.	-	.	ID=comp135425_c0_seq1.mrna2;geneID=comp135425_c0_seq1.path2;Name=comp135425_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=896;mismatches=3;indels=2;unknowns=0;Target=comp135425_c0_seq1 686 745 .;locus=RLOC_00015067
Chr2	stalkie_big_nohaplotig	exon	15822576	15822818	98	-	.	Parent=comp135425_c0_seq1.mrna2;Target=comp135425_c0_seq1 1 243 -
Chr2	stalkie_big_nohaplotig	exon	15825812	15826468	99	-	.	Parent=comp135425_c0_seq1.mrna2;Target=comp135425_c0_seq1 244 900 -
Chr2	stalkie_big_nohaplotig	CDS	15826254	15826313	.	-	0	Parent=comp135425_c0_seq1.mrna2
Chr2	gffcl	locus	15827381	15828480	.	-	.	ID=RLOC_00015068;geneIDs=FBgn0033400.1.path1;transcripts=FBgn0033400.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15827381	15828480	.	-	.	ID=FBgn0033400.1.mrna1;geneID=FBgn0033400.1.path1;Name=FBgn0033400.1;Dir=sensecoverage=100.0;identity=99.5;matches=949;mismatches=5;indels=0;unknowns=0;locus=RLOC_00015068
Chr2	stalkie_big_nohaplotig	exon	15827381	15827501	98	-	.	Parent=FBgn0033400.1.mrna1;Target=FBgn0033400.1 834 954 +
Chr2	stalkie_big_nohaplotig	exon	15827585	15828294	99	-	.	Parent=FBgn0033400.1.mrna1;Target=FBgn0033400.1 124 833 +
Chr2	stalkie_big_nohaplotig	exon	15828358	15828480	100	-	.	Parent=FBgn0033400.1.mrna1;Target=FBgn0033400.1 1 123 +
Chr2	stalkie_big_nohaplotig	CDS	15827381	15827501	.	-	1	Parent=FBgn0033400.1.mrna1;Target=FBgn0033400.1 834 954 +
Chr2	stalkie_big_nohaplotig	CDS	15827585	15828294	.	-	0	Parent=FBgn0033400.1.mrna1;Target=FBgn0033400.1 124 833 +
Chr2	stalkie_big_nohaplotig	CDS	15828358	15828480	.	-	0	Parent=FBgn0033400.1.mrna1;Target=FBgn0033400.1 1 123 +
Chr2	gffcl	locus	15862256	15862672	.	-	.	ID=RLOC_00015070;geneIDs=comp149233_c0_seq1.path1;transcripts=comp149233_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15862256	15862672	.	-	.	ID=comp149233_c0_seq1.mrna1;geneID=comp149233_c0_seq1.path1;Name=comp149233_c0_seq1;Dir=indeterminatecoverage=94.4;identity=95.5;matches=399;mismatches=18;indels=1;unknowns=0;Target=comp149233_c0_seq1 418 1 .;CDS_Target=comp149233_c0_seq1 90 1 .;locus=RLOC_00015070
Chr2	stalkie_big_nohaplotig	exon	15862256	15862672	95	-	.	Parent=comp149233_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	15862584	15862672	.	-	0	Parent=comp149233_c0_seq1.mrna1
Chr2	gffcl	locus	15863749	15865064	.	+	.	ID=RLOC_00015071;geneIDs=FBgn0015801.1.path2;transcripts=FBgn0015801.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	15863749	15865064	.	+	.	ID=FBgn0015801.1.mrna2;geneID=FBgn0015801.1.path2;Name=FBgn0015801.1;Dir=sensecoverage=84.5;identity=99.4;matches=814;mismatches=5;indels=0;unknowns=0;locus=RLOC_00015071
Chr2	stalkie_big_nohaplotig	exon	15863749	15863938	99	+	.	Parent=FBgn0015801.1.mrna2;Target=FBgn0015801.1 151 340 +
Chr2	stalkie_big_nohaplotig	exon	15864436	15865064	99	+	.	Parent=FBgn0015801.1.mrna2;Target=FBgn0015801.1 341 969 +
Chr2	stalkie_big_nohaplotig	CDS	15863749	15863938	.	+	0	Parent=FBgn0015801.1.mrna2;Target=FBgn0015801.1 151 340 +
Chr2	stalkie_big_nohaplotig	CDS	15864436	15865064	.	+	2	Parent=FBgn0015801.1.mrna2;Target=FBgn0015801.1 341 969 +
Chr2	gffcl	locus	15867209	15868413	.	+	.	ID=RLOC_00015072;geneIDs=FBgn0032513.3.path1;transcripts=FBgn0032513.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15867209	15868413	.	+	.	ID=FBgn0032513.3.mrna1;geneID=FBgn0032513.3.path1;Name=FBgn0032513.3;Dir=sensecoverage=100.0;identity=99.1;matches=1139;mismatches=9;indels=1;unknowns=0;locus=RLOC_00015072
Chr2	stalkie_big_nohaplotig	exon	15867209	15867237	100	+	.	Parent=FBgn0032513.3.mrna1;Target=FBgn0032513.3 1 29 +
Chr2	stalkie_big_nohaplotig	exon	15867295	15868413	99	+	.	Parent=FBgn0032513.3.mrna1;Target=FBgn0032513.3 30 1149 +
Chr2	stalkie_big_nohaplotig	CDS	15867209	15867237	.	+	0	Parent=FBgn0032513.3.mrna1;Target=FBgn0032513.3 1 29 +
Chr2	stalkie_big_nohaplotig	CDS	15867295	15868413	.	+	1	Parent=FBgn0032513.3.mrna1;Target=FBgn0032513.3 30 1149 +
Chr2	gffcl	locus	15876485	15877681	.	+	.	ID=RLOC_00015073;geneIDs=comp120331_c0_seq1.path1;transcripts=comp120331_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15876485	15877681	.	+	.	ID=comp120331_c0_seq1.mrna1;geneID=comp120331_c0_seq1.path1;Name=comp120331_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=725;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015073
Chr2	stalkie_big_nohaplotig	exon	15876485	15876507	100	+	.	Parent=comp120331_c0_seq1.mrna1;Target=comp120331_c0_seq1 703 725 -
Chr2	stalkie_big_nohaplotig	exon	15876616	15876983	100	+	.	Parent=comp120331_c0_seq1.mrna1;Target=comp120331_c0_seq1 335 702 -
Chr2	stalkie_big_nohaplotig	exon	15877348	15877681	100	+	.	Parent=comp120331_c0_seq1.mrna1;Target=comp120331_c0_seq1 1 334 -
Chr2	stalkie_big_nohaplotig	CDS	15876487	15876507	.	+	0	Parent=comp120331_c0_seq1.mrna1;Target=comp120331_c0_seq1 703 723 .
Chr2	stalkie_big_nohaplotig	CDS	15876616	15876723	.	+	0	Parent=comp120331_c0_seq1.mrna1;Target=comp120331_c0_seq1 595 702 .
Chr2	gffcl	locus	15894799	15895531	.	-	.	ID=RLOC_00015074;geneIDs=comp155916_c0_seq1.path1;transcripts=comp155916_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15894799	15895531	.	-	.	ID=comp155916_c0_seq1.mrna1;geneID=comp155916_c0_seq1.path1;Name=comp155916_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.8;matches=724;mismatches=9;indels=0;unknowns=0;Target=comp155916_c0_seq1 733 1 .;CDS_Target=comp155916_c0_seq1 323 120 .;locus=RLOC_00015074
Chr2	stalkie_big_nohaplotig	exon	15894799	15895531	98	-	.	Parent=comp155916_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	15895209	15895412	.	-	0	Parent=comp155916_c0_seq1.mrna1
Chr2	gffcl	locus	15931710	15932070	.	-	.	ID=RLOC_00015075;geneIDs=comp57445_c0_seq1.path1;transcripts=comp57445_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15931710	15932070	.	-	.	ID=comp57445_c0_seq1.mrna1;geneID=comp57445_c0_seq1.path1;Name=comp57445_c0_seq1;Dir=indeterminatecoverage=92.8;identity=100.0;matches=361;mismatches=0;indels=0;unknowns=0;Target=comp57445_c0_seq1 368 8 .;CDS_Target=comp57445_c0_seq1 85 8 .;locus=RLOC_00015075
Chr2	stalkie_big_nohaplotig	exon	15931710	15932070	100	-	.	Parent=comp57445_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	15931993	15932070	.	-	0	Parent=comp57445_c0_seq1.mrna1
Chr2	gffcl	locus	15932859	15949157	.	-	.	ID=RLOC_00015076;geneIDs=FBgn0010114.1.path2;transcripts=FBgn0010114.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	15932859	15949157	.	-	.	ID=FBgn0010114.1.mrna2;geneID=FBgn0010114.1.path2;Name=FBgn0010114.1;Dir=sensecoverage=93.9;identity=99.3;matches=2696;mismatches=18;indels=0;unknowns=0;locus=RLOC_00015076
Chr2	stalkie_big_nohaplotig	exon	15932859	15933067	100	-	.	Parent=FBgn0010114.1.mrna2;Target=FBgn0010114.1 2681 2889 +
Chr2	stalkie_big_nohaplotig	exon	15934378	15934560	100	-	.	Parent=FBgn0010114.1.mrna2;Target=FBgn0010114.1 2498 2680 +
Chr2	stalkie_big_nohaplotig	exon	15935178	15935666	98	-	.	Parent=FBgn0010114.1.mrna2;Target=FBgn0010114.1 2009 2497 +
Chr2	stalkie_big_nohaplotig	exon	15935913	15936249	99	-	.	Parent=FBgn0010114.1.mrna2;Target=FBgn0010114.1 1672 2008 +
Chr2	stalkie_big_nohaplotig	exon	15940509	15940606	98	-	.	Parent=FBgn0010114.1.mrna2;Target=FBgn0010114.1 1574 1671 +
Chr2	stalkie_big_nohaplotig	exon	15943650	15943874	99	-	.	Parent=FBgn0010114.1.mrna2;Target=FBgn0010114.1 1349 1573 +
Chr2	stalkie_big_nohaplotig	exon	15947985	15949157	99	-	.	Parent=FBgn0010114.1.mrna2;Target=FBgn0010114.1 176 1348 +
Chr2	stalkie_big_nohaplotig	CDS	15932859	15933067	.	-	1	Parent=FBgn0010114.1.mrna2;Target=FBgn0010114.1 2681 2889 +
Chr2	stalkie_big_nohaplotig	CDS	15934378	15934560	.	-	1	Parent=FBgn0010114.1.mrna2;Target=FBgn0010114.1 2498 2680 +
Chr2	stalkie_big_nohaplotig	CDS	15935178	15935666	.	-	1	Parent=FBgn0010114.1.mrna2;Target=FBgn0010114.1 2009 2497 +
Chr2	stalkie_big_nohaplotig	CDS	15935913	15936249	.	-	2	Parent=FBgn0010114.1.mrna2;Target=FBgn0010114.1 1672 2008 +
Chr2	stalkie_big_nohaplotig	CDS	15940509	15940606	.	-	1	Parent=FBgn0010114.1.mrna2;Target=FBgn0010114.1 1574 1671 +
Chr2	stalkie_big_nohaplotig	CDS	15943650	15943874	.	-	1	Parent=FBgn0010114.1.mrna2;Target=FBgn0010114.1 1349 1573 +
Chr2	stalkie_big_nohaplotig	CDS	15947985	15949157	.	-	1	Parent=FBgn0010114.1.mrna2;Target=FBgn0010114.1 176 1348 +
Chr2	gffcl	locus	15936577	15937617	.	+	.	ID=RLOC_00015077;geneIDs=comp142473_c0_seq1.path1;transcripts=comp142473_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15936577	15937617	.	+	.	ID=comp142473_c0_seq1.mrna1;geneID=comp142473_c0_seq1.path1;Name=comp142473_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.5;matches=1038;mismatches=3;indels=2;unknowns=0;Target=comp142473_c0_seq1 1048 6 .;CDS_Target=comp142473_c0_seq1 304 47 .;locus=RLOC_00015077
Chr2	stalkie_big_nohaplotig	exon	15936577	15937617	99	+	.	Parent=comp142473_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	15936616	15936873	.	+	0	Parent=comp142473_c0_seq1.mrna1
Chr2	gffcl	locus	15937746	15938625	.	-	.	ID=RLOC_00015078;geneIDs=comp152079_c0_seq1.path1;transcripts=comp152079_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15937746	15938625	.	-	.	ID=comp152079_c0_seq1.mrna1;geneID=comp152079_c0_seq1.path1;Name=comp152079_c0_seq1;Dir=indeterminatecoverage=99.8;identity=91.7;matches=819;mismatches=56;indels=18;unknowns=0;Target=comp152079_c0_seq1 890 3 .;CDS_Target=comp152079_c0_seq1 532 467 .;locus=RLOC_00015078
Chr2	stalkie_big_nohaplotig	exon	15937746	15938625	91	-	.	Parent=comp152079_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	15938103	15938158	.	-	0	Parent=comp152079_c0_seq1.mrna1
Chr2	gffcl	locus	15956694	15957303	.	+	.	ID=RLOC_00015079;geneIDs=comp148305_c0_seq1.path2;transcripts=comp148305_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	15956694	15957303	.	+	.	ID=comp148305_c0_seq1.mrna2;geneID=comp148305_c0_seq1.path2;Name=comp148305_c0_seq1;Dir=indeterminatecoverage=96.2;identity=99.5;matches=607;mismatches=3;indels=0;unknowns=0;Target=comp148305_c0_seq1 610 1 .;CDS_Target=comp148305_c0_seq1 77 3 .;locus=RLOC_00015079
Chr2	stalkie_big_nohaplotig	exon	15956694	15957303	99	+	.	Parent=comp148305_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	15956696	15956770	.	+	0	Parent=comp148305_c0_seq1.mrna2
Chr2	gffcl	locus	15991944	15993550	.	+	.	ID=RLOC_00015080;geneIDs=ORF1895.path1;transcripts=ORF1895.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15991944	15993550	.	+	.	ID=ORF1895.mrna1;geneID=ORF1895.path1;Name=ORF1895;Dir=sensecoverage=100.0;identity=99.6;matches=962;mismatches=4;indels=0;unknowns=0;locus=RLOC_00015080
Chr2	stalkie_big_nohaplotig	exon	15991944	15991959	100	+	.	Parent=ORF1895.mrna1;Target=ORF1895 1 16 +
Chr2	stalkie_big_nohaplotig	exon	15992427	15992933	99	+	.	Parent=ORF1895.mrna1;Target=ORF1895 17 523 +
Chr2	stalkie_big_nohaplotig	exon	15993108	15993550	100	+	.	Parent=ORF1895.mrna1;Target=ORF1895 524 966 +
Chr2	stalkie_big_nohaplotig	CDS	15991944	15991959	.	+	0	Parent=ORF1895.mrna1;Target=ORF1895 1 16 +
Chr2	stalkie_big_nohaplotig	CDS	15992427	15992933	.	+	2	Parent=ORF1895.mrna1;Target=ORF1895 17 523 +
Chr2	stalkie_big_nohaplotig	CDS	15993108	15993550	.	+	2	Parent=ORF1895.mrna1;Target=ORF1895 524 966 +
Chr2	gffcl	locus	15994057	15995841	.	+	.	ID=RLOC_00015081;geneIDs=comp162025_c0_seq1.path1;transcripts=comp162025_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	15994057	15995841	.	+	.	ID=comp162025_c0_seq1.mrna1;geneID=comp162025_c0_seq1.path1;Name=comp162025_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.2;matches=1694;mismatches=63;indels=42;unknowns=0;Target=comp162025_c0_seq1 1771 1 .;CDS_Target=comp162025_c0_seq1 1695 1621 .;locus=RLOC_00015081
Chr2	stalkie_big_nohaplotig	exon	15994057	15995841	94	+	.	Parent=comp162025_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	15995678	15995766	.	+	0	Parent=comp162025_c0_seq1.mrna1
Chr2	gffcl	locus	16000708	16000882	.	+	.	ID=RLOC_00015082;geneIDs=FBgn0010114.1.path1;transcripts=FBgn0010114.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16000708	16000882	.	+	.	ID=FBgn0010114.1.mrna1;geneID=FBgn0010114.1.path1;Name=FBgn0010114.1;Dir=indeterminatecoverage=6.1;identity=100.0;matches=175;mismatches=0;indels=0;unknowns=0;Target=FBgn0010114.1 175 1 .;locus=RLOC_00015082
Chr2	stalkie_big_nohaplotig	exon	16000708	16000882	100	+	.	Parent=FBgn0010114.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16000708	16000882	.	+	0	Parent=FBgn0010114.1.mrna1
Chr2	gffcl	locus	16041566	16042195	.	+	.	ID=RLOC_00015083;geneIDs=comp145245_c1_seq1.path1;transcripts=comp145245_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16041566	16042195	.	+	.	ID=comp145245_c1_seq1.mrna1;geneID=comp145245_c1_seq1.path1;Name=comp145245_c1_seq1;Dir=sensecoverage=96.4;identity=96.3;matches=546;mismatches=4;indels=17;unknowns=0;Target=comp145245_c1_seq1 99 119 +;locus=RLOC_00015083
Chr2	stalkie_big_nohaplotig	exon	16041566	16041960	95	+	.	Parent=comp145245_c1_seq1.mrna1;Target=comp145245_c1_seq1 1 393 +
Chr2	stalkie_big_nohaplotig	exon	16042032	16042195	97	+	.	Parent=comp145245_c1_seq1.mrna1;Target=comp145245_c1_seq1 394 558 +
Chr2	stalkie_big_nohaplotig	CDS	16041673	16041686	.	+	0	Parent=comp145245_c1_seq1.mrna1
Chr2	gffcl	locus	16063615	16066039	.	+	.	ID=RLOC_00015084;geneIDs=comp142917_c0_seq1.path1;transcripts=comp142917_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16063615	16066039	.	+	.	ID=comp142917_c0_seq1.mrna1;geneID=comp142917_c0_seq1.path1;Name=comp142917_c0_seq1;Dir=antisensecoverage=99.4;identity=98.8;matches=1985;mismatches=10;indels=15;unknowns=0;locus=RLOC_00015084
Chr2	stalkie_big_nohaplotig	exon	16063615	16063746	98	+	.	Parent=comp142917_c0_seq1.mrna1;Target=comp142917_c0_seq1 1879 2010 -
Chr2	stalkie_big_nohaplotig	exon	16063880	16064101	99	+	.	Parent=comp142917_c0_seq1.mrna1;Target=comp142917_c0_seq1 1657 1878 -
Chr2	stalkie_big_nohaplotig	exon	16064212	16064271	100	+	.	Parent=comp142917_c0_seq1.mrna1;Target=comp142917_c0_seq1 1597 1656 -
Chr2	stalkie_big_nohaplotig	exon	16064332	16064413	100	+	.	Parent=comp142917_c0_seq1.mrna1;Target=comp142917_c0_seq1 1515 1596 -
Chr2	stalkie_big_nohaplotig	exon	16064469	16064637	100	+	.	Parent=comp142917_c0_seq1.mrna1;Target=comp142917_c0_seq1 1346 1514 -
Chr2	stalkie_big_nohaplotig	exon	16064710	16066039	98	+	.	Parent=comp142917_c0_seq1.mrna1;Target=comp142917_c0_seq1 1 1345 -
Chr2	stalkie_big_nohaplotig	CDS	16064254	16064271	.	+	0	Parent=comp142917_c0_seq1.mrna1;Target=comp142917_c0_seq1 1597 1614 .
Chr2	stalkie_big_nohaplotig	CDS	16064332	16064413	.	+	0	Parent=comp142917_c0_seq1.mrna1;Target=comp142917_c0_seq1 1515 1596 .
Chr2	stalkie_big_nohaplotig	CDS	16064469	16064637	.	+	2	Parent=comp142917_c0_seq1.mrna1;Target=comp142917_c0_seq1 1346 1514 .
Chr2	stalkie_big_nohaplotig	CDS	16064710	16064803	.	+	1	Parent=comp142917_c0_seq1.mrna1;Target=comp142917_c0_seq1 1252 1345 .
Chr2	gffcl	locus	16081538	16082036	.	+	.	ID=RLOC_00015085;geneIDs=comp470794_c0_seq1.path1;transcripts=comp470794_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16081538	16082036	.	+	.	ID=comp470794_c0_seq1.mrna1;geneID=comp470794_c0_seq1.path1;Name=comp470794_c0_seq1;Dir=indeterminatecoverage=97.5;identity=99.8;matches=498;mismatches=1;indels=0;unknowns=0;Target=comp470794_c0_seq1 500 2 .;CDS_Target=comp470794_c0_seq1 137 3 .;locus=RLOC_00015085
Chr2	stalkie_big_nohaplotig	exon	16081538	16082036	99	+	.	Parent=comp470794_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16081539	16081673	.	+	0	Parent=comp470794_c0_seq1.mrna1
Chr2	gffcl	locus	16084540	16086293	.	-	.	ID=RLOC_00015086;geneIDs=FBgn0083977.1.path1;transcripts=FBgn0083977.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16084540	16086293	.	-	.	ID=FBgn0083977.1.mrna1;geneID=FBgn0083977.1.path1;Name=FBgn0083977.1;Dir=sensecoverage=99.8;identity=98.9;matches=1670;mismatches=17;indels=1;unknowns=0;locus=RLOC_00015086
Chr2	stalkie_big_nohaplotig	exon	16084540	16086113	98	-	.	Parent=FBgn0083977.1.mrna1;Target=FBgn0083977.1 118 1692 +
Chr2	stalkie_big_nohaplotig	exon	16086181	16086293	99	-	.	Parent=FBgn0083977.1.mrna1;Target=FBgn0083977.1 5 117 +
Chr2	stalkie_big_nohaplotig	CDS	16084540	16086113	.	-	0	Parent=FBgn0083977.1.mrna1;Target=FBgn0083977.1 118 1692 +
Chr2	stalkie_big_nohaplotig	CDS	16086181	16086291	.	-	0	Parent=FBgn0083977.1.mrna1;Target=FBgn0083977.1 7 117 +
Chr2	gffcl	locus	16086295	16089039	.	-	.	ID=RLOC_00015087;geneIDs=ORF1299.path1;transcripts=ORF1299.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16086295	16089039	.	-	.	ID=ORF1299.mrna1;geneID=ORF1299.path1;Name=ORF1299;Dir=sensecoverage=100.0;identity=99.7;matches=1149;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015087
Chr2	stalkie_big_nohaplotig	exon	16086295	16086501	99	-	.	Parent=ORF1299.mrna1;Target=ORF1299 946 1152 +
Chr2	stalkie_big_nohaplotig	exon	16088022	16088495	99	-	.	Parent=ORF1299.mrna1;Target=ORF1299 472 945 +
Chr2	stalkie_big_nohaplotig	exon	16088569	16089039	100	-	.	Parent=ORF1299.mrna1;Target=ORF1299 1 471 +
Chr2	stalkie_big_nohaplotig	CDS	16086295	16086501	.	-	0	Parent=ORF1299.mrna1;Target=ORF1299 946 1152 +
Chr2	stalkie_big_nohaplotig	CDS	16088022	16088495	.	-	0	Parent=ORF1299.mrna1;Target=ORF1299 472 945 +
Chr2	stalkie_big_nohaplotig	CDS	16088569	16089039	.	-	0	Parent=ORF1299.mrna1;Target=ORF1299 1 471 +
Chr2	gffcl	locus	16107718	16107789	.	+	.	ID=RLOC_00015088;geneIDs=comp146195_c0_seq1.path1;transcripts=comp146195_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16107718	16107789	.	+	.	ID=comp146195_c0_seq1.mrna1;geneID=comp146195_c0_seq1.path1;Name=comp146195_c0_seq1;Dir=indeterminatecoverage=14.3;identity=98.6;matches=71;mismatches=1;indels=0;unknowns=0;Target=comp146195_c0_seq1 72 1 .;CDS_Target=comp146195_c0_seq1 72 3 .;locus=RLOC_00015088
Chr2	stalkie_big_nohaplotig	exon	16107718	16107789	98	+	.	Parent=comp146195_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16107720	16107789	.	+	0	Parent=comp146195_c0_seq1.mrna1
Chr2	gffcl	locus	16130274	16135692	.	+	.	ID=RLOC_00015089;geneIDs=FBgn0033373.1.path1;transcripts=FBgn0033373.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16130274	16135692	.	+	.	ID=FBgn0033373.1.mrna1;geneID=FBgn0033373.1.path1;Name=FBgn0033373.1;Dir=sensecoverage=100.0;identity=99.6;matches=1321;mismatches=5;indels=0;unknowns=0;locus=RLOC_00015089
Chr2	stalkie_big_nohaplotig	exon	16130274	16130364	98	+	.	Parent=FBgn0033373.1.mrna1;Target=FBgn0033373.1 1 91 +
Chr2	stalkie_big_nohaplotig	exon	16133813	16134098	100	+	.	Parent=FBgn0033373.1.mrna1;Target=FBgn0033373.1 92 377 +
Chr2	stalkie_big_nohaplotig	exon	16134153	16134393	99	+	.	Parent=FBgn0033373.1.mrna1;Target=FBgn0033373.1 378 618 +
Chr2	stalkie_big_nohaplotig	exon	16134452	16134658	99	+	.	Parent=FBgn0033373.1.mrna1;Target=FBgn0033373.1 619 825 +
Chr2	stalkie_big_nohaplotig	exon	16134728	16134864	100	+	.	Parent=FBgn0033373.1.mrna1;Target=FBgn0033373.1 826 962 +
Chr2	stalkie_big_nohaplotig	exon	16134977	16135113	99	+	.	Parent=FBgn0033373.1.mrna1;Target=FBgn0033373.1 963 1099 +
Chr2	stalkie_big_nohaplotig	exon	16135175	16135300	100	+	.	Parent=FBgn0033373.1.mrna1;Target=FBgn0033373.1 1100 1225 +
Chr2	stalkie_big_nohaplotig	exon	16135592	16135692	100	+	.	Parent=FBgn0033373.1.mrna1;Target=FBgn0033373.1 1226 1326 +
Chr2	stalkie_big_nohaplotig	CDS	16130274	16130364	.	+	0	Parent=FBgn0033373.1.mrna1;Target=FBgn0033373.1 1 91 +
Chr2	stalkie_big_nohaplotig	CDS	16133813	16134098	.	+	2	Parent=FBgn0033373.1.mrna1;Target=FBgn0033373.1 92 377 +
Chr2	stalkie_big_nohaplotig	CDS	16134153	16134393	.	+	1	Parent=FBgn0033373.1.mrna1;Target=FBgn0033373.1 378 618 +
Chr2	stalkie_big_nohaplotig	CDS	16134452	16134658	.	+	0	Parent=FBgn0033373.1.mrna1;Target=FBgn0033373.1 619 825 +
Chr2	stalkie_big_nohaplotig	CDS	16134728	16134864	.	+	0	Parent=FBgn0033373.1.mrna1;Target=FBgn0033373.1 826 962 +
Chr2	stalkie_big_nohaplotig	CDS	16134977	16135113	.	+	1	Parent=FBgn0033373.1.mrna1;Target=FBgn0033373.1 963 1099 +
Chr2	stalkie_big_nohaplotig	CDS	16135175	16135300	.	+	2	Parent=FBgn0033373.1.mrna1;Target=FBgn0033373.1 1100 1225 +
Chr2	stalkie_big_nohaplotig	CDS	16135592	16135692	.	+	2	Parent=FBgn0033373.1.mrna1;Target=FBgn0033373.1 1226 1326 +
Chr2	gffcl	locus	16136124	16138144	.	-	.	ID=RLOC_00015090;geneIDs=FBgn0010220.1.path1,FBgn0015075.1.path2;transcripts=FBgn0015075.1.mrna2,FBgn0010220.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16136124	16136864	.	-	.	ID=FBgn0015075.1.mrna2;geneID=FBgn0015075.1.path2;Name=FBgn0015075.1;Dir=sensecoverage=25.8;identity=98.5;matches=607;mismatches=0;indels=9;unknowns=0;locus=RLOC_00015090
Chr2	stalkie_big_nohaplotig	exon	16136124	16136370	96	-	.	Parent=FBgn0015075.1.mrna2;Target=FBgn0015075.1 2118 2355 +
Chr2	stalkie_big_nohaplotig	exon	16136429	16136582	100	-	.	Parent=FBgn0015075.1.mrna2;Target=FBgn0015075.1 1964 2117 +
Chr2	stalkie_big_nohaplotig	exon	16136650	16136864	100	-	.	Parent=FBgn0015075.1.mrna2;Target=FBgn0015075.1 1749 1963 +
Chr2	stalkie_big_nohaplotig	CDS	16136124	16136370	.	-	2	Parent=FBgn0015075.1.mrna2;Target=FBgn0015075.1 2118 2355 +
Chr2	stalkie_big_nohaplotig	CDS	16136429	16136582	.	-	0	Parent=FBgn0015075.1.mrna2;Target=FBgn0015075.1 1964 2117 +
Chr2	stalkie_big_nohaplotig	CDS	16136650	16136864	.	-	2	Parent=FBgn0015075.1.mrna2;Target=FBgn0015075.1 1749 1963 +
Chr2	stalkie_big_nohaplotig	mRNA	16136846	16138144	.	-	.	ID=FBgn0010220.1.mrna1;geneID=FBgn0010220.1.path1;Name=FBgn0010220.1;Dir=sensecoverage=69.4;identity=98.7;matches=1036;mismatches=14;indels=0;unknowns=0;locus=RLOC_00015090
Chr2	stalkie_big_nohaplotig	exon	16136846	16137008	100	-	.	Parent=FBgn0010220.1.mrna1;Target=FBgn0010220.1 888 1050 +
Chr2	stalkie_big_nohaplotig	exon	16137071	16137237	98	-	.	Parent=FBgn0010220.1.mrna1;Target=FBgn0010220.1 721 887 +
Chr2	stalkie_big_nohaplotig	exon	16137315	16137662	97	-	.	Parent=FBgn0010220.1.mrna1;Target=FBgn0010220.1 373 720 +
Chr2	stalkie_big_nohaplotig	exon	16137718	16137911	98	-	.	Parent=FBgn0010220.1.mrna1;Target=FBgn0010220.1 179 372 +
Chr2	stalkie_big_nohaplotig	exon	16137967	16138144	99	-	.	Parent=FBgn0010220.1.mrna1;Target=FBgn0010220.1 1 178 +
Chr2	stalkie_big_nohaplotig	CDS	16136846	16137008	.	-	1	Parent=FBgn0010220.1.mrna1;Target=FBgn0010220.1 888 1050 +
Chr2	stalkie_big_nohaplotig	CDS	16137071	16137237	.	-	0	Parent=FBgn0010220.1.mrna1;Target=FBgn0010220.1 721 887 +
Chr2	stalkie_big_nohaplotig	CDS	16137315	16137662	.	-	0	Parent=FBgn0010220.1.mrna1;Target=FBgn0010220.1 373 720 +
Chr2	stalkie_big_nohaplotig	CDS	16137718	16137911	.	-	2	Parent=FBgn0010220.1.mrna1;Target=FBgn0010220.1 179 372 +
Chr2	stalkie_big_nohaplotig	CDS	16137967	16138144	.	-	0	Parent=FBgn0010220.1.mrna1;Target=FBgn0010220.1 1 178 +
Chr2	gffcl	locus	16139706	16140413	.	-	.	ID=RLOC_00015091;geneIDs=FBgn0261596.1.path1;transcripts=FBgn0261596.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16139706	16140413	.	-	.	ID=FBgn0261596.1.mrna1;geneID=FBgn0261596.1.path1;Name=FBgn0261596.1;Dir=sensecoverage=100.0;identity=99.8;matches=437;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015091
Chr2	stalkie_big_nohaplotig	exon	16139706	16140108	99	-	.	Parent=FBgn0261596.1.mrna1;Target=FBgn0261596.1 36 438 +
Chr2	stalkie_big_nohaplotig	exon	16140379	16140413	100	-	.	Parent=FBgn0261596.1.mrna1;Target=FBgn0261596.1 1 35 +
Chr2	stalkie_big_nohaplotig	CDS	16139706	16140108	.	-	1	Parent=FBgn0261596.1.mrna1;Target=FBgn0261596.1 36 438 +
Chr2	stalkie_big_nohaplotig	CDS	16140379	16140413	.	-	0	Parent=FBgn0261596.1.mrna1;Target=FBgn0261596.1 1 35 +
Chr2	gffcl	locus	16151240	16153818	.	-	.	ID=RLOC_00015092;geneIDs=comp91626_c0_seq1.path1,comp162095_c0_seq1.path1;transcripts=comp162095_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16151240	16153818	.	-	.	ID=comp162095_c0_seq1.mrna1;geneID=comp162095_c0_seq1.path1;Name=comp162095_c0_seq1;Dir=indeterminatecoverage=99.5;identity=95.5;matches=2474;mismatches=57;indels=59;unknowns=0;Target=comp162095_c0_seq1 2554 13 .;CDS_Target=comp162095_c0_seq1 1045 902 .;locus=RLOC_00015092
Chr2	stalkie_big_nohaplotig	exon	16151240	16153818	95	-	.	Parent=comp162095_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16152739	16152882	.	-	0	Parent=comp162095_c0_seq1.mrna1
Chr2	gffcl	locus	16154353	16227525	.	-	.	ID=RLOC_00015093;geneIDs=FBgn0263077.1.path1,comp116749_c0_seq1.path1;transcripts=FBgn0263077.1.mrna1,comp116749_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16154353	16227525	.	-	.	ID=FBgn0263077.1.mrna1;geneID=FBgn0263077.1.path1;Name=FBgn0263077.1;Dir=sensecoverage=100.0;identity=99.8;matches=3137;mismatches=7;indels=0;unknowns=0;locus=RLOC_00015093
Chr2	stalkie_big_nohaplotig	exon	16154353	16155187	99	-	.	Parent=FBgn0263077.1.mrna1;Target=FBgn0263077.1 2310 3144 +
Chr2	stalkie_big_nohaplotig	exon	16156566	16156776	99	-	.	Parent=FBgn0263077.1.mrna1;Target=FBgn0263077.1 2099 2309 +
Chr2	stalkie_big_nohaplotig	exon	16174482	16174991	99	-	.	Parent=FBgn0263077.1.mrna1;Target=FBgn0263077.1 1589 2098 +
Chr2	stalkie_big_nohaplotig	exon	16175047	16175188	100	-	.	Parent=FBgn0263077.1.mrna1;Target=FBgn0263077.1 1447 1588 +
Chr2	stalkie_big_nohaplotig	exon	16175248	16175415	98	-	.	Parent=FBgn0263077.1.mrna1;Target=FBgn0263077.1 1279 1446 +
Chr2	stalkie_big_nohaplotig	exon	16178869	16179182	100	-	.	Parent=FBgn0263077.1.mrna1;Target=FBgn0263077.1 965 1278 +
Chr2	stalkie_big_nohaplotig	exon	16193383	16193475	100	-	.	Parent=FBgn0263077.1.mrna1;Target=FBgn0263077.1 872 964 +
Chr2	stalkie_big_nohaplotig	exon	16193776	16193931	100	-	.	Parent=FBgn0263077.1.mrna1;Target=FBgn0263077.1 716 871 +
Chr2	stalkie_big_nohaplotig	exon	16193997	16194235	100	-	.	Parent=FBgn0263077.1.mrna1;Target=FBgn0263077.1 477 715 +
Chr2	stalkie_big_nohaplotig	exon	16194668	16194778	100	-	.	Parent=FBgn0263077.1.mrna1;Target=FBgn0263077.1 366 476 +
Chr2	stalkie_big_nohaplotig	exon	16227161	16227525	100	-	.	Parent=FBgn0263077.1.mrna1;Target=FBgn0263077.1 1 365 +
Chr2	stalkie_big_nohaplotig	CDS	16154353	16155187	.	-	1	Parent=FBgn0263077.1.mrna1;Target=FBgn0263077.1 2310 3144 +
Chr2	stalkie_big_nohaplotig	CDS	16156566	16156776	.	-	2	Parent=FBgn0263077.1.mrna1;Target=FBgn0263077.1 2099 2309 +
Chr2	stalkie_big_nohaplotig	CDS	16174482	16174991	.	-	2	Parent=FBgn0263077.1.mrna1;Target=FBgn0263077.1 1589 2098 +
Chr2	stalkie_big_nohaplotig	CDS	16175047	16175188	.	-	0	Parent=FBgn0263077.1.mrna1;Target=FBgn0263077.1 1447 1588 +
Chr2	stalkie_big_nohaplotig	CDS	16175248	16175415	.	-	0	Parent=FBgn0263077.1.mrna1;Target=FBgn0263077.1 1279 1446 +
Chr2	stalkie_big_nohaplotig	CDS	16178869	16179182	.	-	2	Parent=FBgn0263077.1.mrna1;Target=FBgn0263077.1 965 1278 +
Chr2	stalkie_big_nohaplotig	CDS	16193383	16193475	.	-	2	Parent=FBgn0263077.1.mrna1;Target=FBgn0263077.1 872 964 +
Chr2	stalkie_big_nohaplotig	CDS	16193776	16193931	.	-	2	Parent=FBgn0263077.1.mrna1;Target=FBgn0263077.1 716 871 +
Chr2	stalkie_big_nohaplotig	CDS	16193997	16194235	.	-	1	Parent=FBgn0263077.1.mrna1;Target=FBgn0263077.1 477 715 +
Chr2	stalkie_big_nohaplotig	CDS	16194668	16194778	.	-	1	Parent=FBgn0263077.1.mrna1;Target=FBgn0263077.1 366 476 +
Chr2	stalkie_big_nohaplotig	CDS	16227161	16227525	.	-	0	Parent=FBgn0263077.1.mrna1;Target=FBgn0263077.1 1 365 +
Chr2	stalkie_big_nohaplotig	mRNA	16179160	16190355	.	-	.	ID=comp116749_c0_seq1.mrna1;geneID=comp116749_c0_seq1.path1;Name=comp116749_c0_seq1;Dir=sensecoverage=100.0;identity=98.5;matches=514;mismatches=2;indels=6;unknowns=0;locus=RLOC_00015093
Chr2	stalkie_big_nohaplotig	exon	16179160	16179182	100	-	.	Parent=comp116749_c0_seq1.mrna1;Target=comp116749_c0_seq1 497 519 +
Chr2	stalkie_big_nohaplotig	exon	16181403	16181723	98	-	.	Parent=comp116749_c0_seq1.mrna1;Target=comp116749_c0_seq1 173 496 +
Chr2	stalkie_big_nohaplotig	exon	16190181	16190355	97	-	.	Parent=comp116749_c0_seq1.mrna1;Target=comp116749_c0_seq1 1 172 +
Chr2	stalkie_big_nohaplotig	CDS	16179160	16179182	.	-	2	Parent=comp116749_c0_seq1.mrna1;Target=comp116749_c0_seq1 497 519 +
Chr2	stalkie_big_nohaplotig	CDS	16181403	16181547	.	-	0	Parent=comp116749_c0_seq1.mrna1;Target=comp116749_c0_seq1 352 496 +
Chr2	gffcl	locus	16157241	16158719	.	.	.	ID=RLOC_00015094;geneIDs=ORF735.path1,comp159058_c0_seq1.path1;transcripts=ORF735.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16157241	16158719	.	-	.	ID=ORF735.mrna1;geneID=ORF735.path1;Name=ORF735;Dir=indeterminatecoverage=100.0;identity=97.6;matches=1443;mismatches=36;indels=0;unknowns=0;Target=ORF735 1479 1 .;locus=RLOC_00015094
Chr2	stalkie_big_nohaplotig	exon	16157241	16158719	97	-	.	Parent=ORF735.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16157241	16158719	.	-	0	Parent=ORF735.mrna1
Chr2	gffcl	locus	16190667	16191475	.	-	.	ID=RLOC_00015095;geneIDs=comp1044800_c0_seq1.path1;transcripts=comp1044800_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16190667	16191475	.	-	.	ID=comp1044800_c0_seq1.mrna1;geneID=comp1044800_c0_seq1.path1;Name=comp1044800_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=809;mismatches=0;indels=0;unknowns=0;Target=comp1044800_c0_seq1 810 2 .;CDS_Target=comp1044800_c0_seq1 171 58 .;locus=RLOC_00015095
Chr2	stalkie_big_nohaplotig	exon	16190667	16191475	100	-	.	Parent=comp1044800_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16191306	16191419	.	-	0	Parent=comp1044800_c0_seq1.mrna1
Chr2	gffcl	locus	16199076	16199806	.	+	.	ID=RLOC_00015096;geneIDs=comp118124_c1_seq1.path1;transcripts=comp118124_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16199076	16199806	.	+	.	ID=comp118124_c1_seq1.mrna1;geneID=comp118124_c1_seq1.path1;Name=comp118124_c1_seq1;Dir=indeterminatecoverage=97.6;identity=97.7;matches=723;mismatches=8;indels=9;unknowns=0;Target=comp118124_c1_seq1 740 1 .;CDS_Target=comp118124_c1_seq1 709 644 .;locus=RLOC_00015096
Chr2	stalkie_big_nohaplotig	exon	16199076	16199806	97	+	.	Parent=comp118124_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16199710	16199775	.	+	0	Parent=comp118124_c1_seq1.mrna1
Chr2	gffcl	locus	16212690	16217442	.	-	.	ID=RLOC_00015097;geneIDs=comp882677_c0_seq1.path1;transcripts=comp882677_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16212690	16217442	.	-	.	ID=comp882677_c0_seq1.mrna1;geneID=comp882677_c0_seq1.path1;Name=comp882677_c0_seq1;Dir=antisensecoverage=100.0;identity=99.2;matches=374;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015097
Chr2	stalkie_big_nohaplotig	exon	16212690	16212998	99	-	.	Parent=comp882677_c0_seq1.mrna1;Target=comp882677_c0_seq1 1 309 -
Chr2	stalkie_big_nohaplotig	exon	16217375	16217442	100	-	.	Parent=comp882677_c0_seq1.mrna1;Target=comp882677_c0_seq1 310 377 -
Chr2	stalkie_big_nohaplotig	CDS	16212858	16212998	.	-	0	Parent=comp882677_c0_seq1.mrna1;Target=comp882677_c0_seq1 169 309 .
Chr2	stalkie_big_nohaplotig	CDS	16217375	16217440	.	-	0	Parent=comp882677_c0_seq1.mrna1;Target=comp882677_c0_seq1 310 375 .
Chr2	gffcl	locus	16241362	16242346	.	+	.	ID=RLOC_00015098;geneIDs=comp144646_c0_seq1.path1;transcripts=comp144646_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16241362	16242346	.	+	.	ID=comp144646_c0_seq1.mrna1;geneID=comp144646_c0_seq1.path1;Name=comp144646_c0_seq1;Dir=indeterminatecoverage=97.9;identity=99.6;matches=982;mismatches=3;indels=1;unknowns=0;Target=comp144646_c0_seq1 1007 22 .;CDS_Target=comp144646_c0_seq1 980 696 .;locus=RLOC_00015098
Chr2	stalkie_big_nohaplotig	exon	16241362	16242346	99	+	.	Parent=comp144646_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16242036	16242319	.	+	0	Parent=comp144646_c0_seq1.mrna1
Chr2	gffcl	locus	16268603	16293891	.	+	.	ID=RLOC_00015099;geneIDs=FBgn0033196.1.path1;transcripts=FBgn0033196.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16268603	16293891	.	+	.	ID=FBgn0033196.1.mrna1;geneID=FBgn0033196.1.path1;Name=FBgn0033196.1;Dir=sensecoverage=100.0;identity=99.4;matches=1417;mismatches=8;indels=0;unknowns=0;locus=RLOC_00015099
Chr2	stalkie_big_nohaplotig	exon	16268603	16268741	100	+	.	Parent=FBgn0033196.1.mrna1;Target=FBgn0033196.1 1 139 +
Chr2	stalkie_big_nohaplotig	exon	16274349	16274463	98	+	.	Parent=FBgn0033196.1.mrna1;Target=FBgn0033196.1 140 254 +
Chr2	stalkie_big_nohaplotig	exon	16277051	16277153	99	+	.	Parent=FBgn0033196.1.mrna1;Target=FBgn0033196.1 255 357 +
Chr2	stalkie_big_nohaplotig	exon	16277234	16277362	100	+	.	Parent=FBgn0033196.1.mrna1;Target=FBgn0033196.1 358 486 +
Chr2	stalkie_big_nohaplotig	exon	16277965	16278060	98	+	.	Parent=FBgn0033196.1.mrna1;Target=FBgn0033196.1 487 582 +
Chr2	stalkie_big_nohaplotig	exon	16288216	16288357	100	+	.	Parent=FBgn0033196.1.mrna1;Target=FBgn0033196.1 583 724 +
Chr2	stalkie_big_nohaplotig	exon	16288935	16289125	99	+	.	Parent=FBgn0033196.1.mrna1;Target=FBgn0033196.1 725 915 +
Chr2	stalkie_big_nohaplotig	exon	16289997	16290121	100	+	.	Parent=FBgn0033196.1.mrna1;Target=FBgn0033196.1 916 1040 +
Chr2	stalkie_big_nohaplotig	exon	16291360	16291470	100	+	.	Parent=FBgn0033196.1.mrna1;Target=FBgn0033196.1 1041 1151 +
Chr2	stalkie_big_nohaplotig	exon	16293618	16293891	98	+	.	Parent=FBgn0033196.1.mrna1;Target=FBgn0033196.1 1152 1425 +
Chr2	stalkie_big_nohaplotig	CDS	16268603	16268741	.	+	0	Parent=FBgn0033196.1.mrna1;Target=FBgn0033196.1 1 139 +
Chr2	stalkie_big_nohaplotig	CDS	16274349	16274463	.	+	2	Parent=FBgn0033196.1.mrna1;Target=FBgn0033196.1 140 254 +
Chr2	stalkie_big_nohaplotig	CDS	16277051	16277153	.	+	1	Parent=FBgn0033196.1.mrna1;Target=FBgn0033196.1 255 357 +
Chr2	stalkie_big_nohaplotig	CDS	16277234	16277362	.	+	0	Parent=FBgn0033196.1.mrna1;Target=FBgn0033196.1 358 486 +
Chr2	stalkie_big_nohaplotig	CDS	16277965	16278060	.	+	0	Parent=FBgn0033196.1.mrna1;Target=FBgn0033196.1 487 582 +
Chr2	stalkie_big_nohaplotig	CDS	16288216	16288357	.	+	0	Parent=FBgn0033196.1.mrna1;Target=FBgn0033196.1 583 724 +
Chr2	stalkie_big_nohaplotig	CDS	16288935	16289125	.	+	2	Parent=FBgn0033196.1.mrna1;Target=FBgn0033196.1 725 915 +
Chr2	stalkie_big_nohaplotig	CDS	16289997	16290121	.	+	0	Parent=FBgn0033196.1.mrna1;Target=FBgn0033196.1 916 1040 +
Chr2	stalkie_big_nohaplotig	CDS	16291360	16291470	.	+	1	Parent=FBgn0033196.1.mrna1;Target=FBgn0033196.1 1041 1151 +
Chr2	stalkie_big_nohaplotig	CDS	16293618	16293891	.	+	1	Parent=FBgn0033196.1.mrna1;Target=FBgn0033196.1 1152 1425 +
Chr2	gffcl	locus	16294639	16295929	.	+	.	ID=RLOC_00015100;geneIDs=comp154359_c0_seq1.path1;transcripts=comp154359_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16294639	16295929	.	+	.	ID=comp154359_c0_seq1.mrna1;geneID=comp154359_c0_seq1.path1;Name=comp154359_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=1267;mismatches=22;indels=2;unknowns=0;Target=comp154359_c0_seq1 1289 1 .;CDS_Target=comp154359_c0_seq1 781 578 .;locus=RLOC_00015100
Chr2	stalkie_big_nohaplotig	exon	16294639	16295929	98	+	.	Parent=comp154359_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16295218	16295421	.	+	0	Parent=comp154359_c0_seq1.mrna1
Chr2	gffcl	locus	16296217	16296444	.	+	.	ID=RLOC_00015101;geneIDs=comp117909_c0_seq1.path1;transcripts=comp117909_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16296217	16296444	.	+	.	ID=comp117909_c0_seq1.mrna1;geneID=comp117909_c0_seq1.path1;Name=comp117909_c0_seq1;Dir=indeterminatecoverage=83.8;identity=99.1;matches=226;mismatches=2;indels=0;unknowns=0;Target=comp117909_c0_seq1 246 19 .;CDS_Target=comp117909_c0_seq1 112 20 .;locus=RLOC_00015101
Chr2	stalkie_big_nohaplotig	exon	16296217	16296444	99	+	.	Parent=comp117909_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16296218	16296310	.	+	0	Parent=comp117909_c0_seq1.mrna1
Chr2	gffcl	locus	16298508	16303868	.	-	.	ID=RLOC_00015102;geneIDs=FBgn0261385.1.path2;transcripts=FBgn0261385.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	16298508	16303868	.	-	.	ID=FBgn0261385.1.mrna2;geneID=FBgn0261385.1.path2;Name=FBgn0261385.1;Dir=sensecoverage=90.7;identity=98.8;matches=3487;mismatches=38;indels=3;unknowns=0;locus=RLOC_00015102
Chr2	stalkie_big_nohaplotig	exon	16298508	16298972	99	-	.	Parent=FBgn0261385.1.mrna2;Target=FBgn0261385.1 3424 3888 +
Chr2	stalkie_big_nohaplotig	exon	16299044	16299295	98	-	.	Parent=FBgn0261385.1.mrna2;Target=FBgn0261385.1 3172 3423 +
Chr2	stalkie_big_nohaplotig	exon	16299414	16299712	98	-	.	Parent=FBgn0261385.1.mrna2;Target=FBgn0261385.1 2873 3171 +
Chr2	stalkie_big_nohaplotig	exon	16299772	16300120	98	-	.	Parent=FBgn0261385.1.mrna2;Target=FBgn0261385.1 2524 2872 +
Chr2	stalkie_big_nohaplotig	exon	16300182	16300424	99	-	.	Parent=FBgn0261385.1.mrna2;Target=FBgn0261385.1 2281 2523 +
Chr2	stalkie_big_nohaplotig	exon	16300488	16300676	98	-	.	Parent=FBgn0261385.1.mrna2;Target=FBgn0261385.1 2092 2280 +
Chr2	stalkie_big_nohaplotig	exon	16301463	16301604	100	-	.	Parent=FBgn0261385.1.mrna2;Target=FBgn0261385.1 1950 2091 +
Chr2	stalkie_big_nohaplotig	exon	16301921	16302137	100	-	.	Parent=FBgn0261385.1.mrna2;Target=FBgn0261385.1 1733 1949 +
Chr2	stalkie_big_nohaplotig	exon	16302297	16302683	98	-	.	Parent=FBgn0261385.1.mrna2;Target=FBgn0261385.1 1346 1732 +
Chr2	stalkie_big_nohaplotig	exon	16302791	16303757	98	-	.	Parent=FBgn0261385.1.mrna2;Target=FBgn0261385.1 376 1345 +
Chr2	stalkie_big_nohaplotig	exon	16303854	16303868	100	-	.	Parent=FBgn0261385.1.mrna2;Target=FBgn0261385.1 361 375 +
Chr2	stalkie_big_nohaplotig	CDS	16298508	16298972	.	-	0	Parent=FBgn0261385.1.mrna2;Target=FBgn0261385.1 3424 3888 +
Chr2	stalkie_big_nohaplotig	CDS	16299044	16299295	.	-	0	Parent=FBgn0261385.1.mrna2;Target=FBgn0261385.1 3172 3423 +
Chr2	stalkie_big_nohaplotig	CDS	16299414	16299712	.	-	2	Parent=FBgn0261385.1.mrna2;Target=FBgn0261385.1 2873 3171 +
Chr2	stalkie_big_nohaplotig	CDS	16299772	16300120	.	-	0	Parent=FBgn0261385.1.mrna2;Target=FBgn0261385.1 2524 2872 +
Chr2	stalkie_big_nohaplotig	CDS	16300182	16300424	.	-	0	Parent=FBgn0261385.1.mrna2;Target=FBgn0261385.1 2281 2523 +
Chr2	stalkie_big_nohaplotig	CDS	16300488	16300676	.	-	0	Parent=FBgn0261385.1.mrna2;Target=FBgn0261385.1 2092 2280 +
Chr2	stalkie_big_nohaplotig	CDS	16301463	16301604	.	-	1	Parent=FBgn0261385.1.mrna2;Target=FBgn0261385.1 1950 2091 +
Chr2	stalkie_big_nohaplotig	CDS	16301921	16302137	.	-	2	Parent=FBgn0261385.1.mrna2;Target=FBgn0261385.1 1733 1949 +
Chr2	stalkie_big_nohaplotig	CDS	16302297	16302683	.	-	2	Parent=FBgn0261385.1.mrna2;Target=FBgn0261385.1 1346 1732 +
Chr2	stalkie_big_nohaplotig	CDS	16302791	16303757	.	-	0	Parent=FBgn0261385.1.mrna2;Target=FBgn0261385.1 376 1345 +
Chr2	stalkie_big_nohaplotig	CDS	16303854	16303868	.	-	0	Parent=FBgn0261385.1.mrna2;Target=FBgn0261385.1 361 375 +
Chr2	gffcl	locus	16330487	16343551	.	-	.	ID=RLOC_00015103;geneIDs=FBgn0264089.1.path1;transcripts=FBgn0264089.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16330487	16343551	.	-	.	ID=FBgn0264089.1.mrna1;geneID=FBgn0264089.1.path1;Name=FBgn0264089.1;Dir=sensecoverage=100.0;identity=99.6;matches=4514;mismatches=15;indels=1;unknowns=0;locus=RLOC_00015103
Chr2	stalkie_big_nohaplotig	exon	16330487	16330605	99	-	.	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 4411 4530 +
Chr2	stalkie_big_nohaplotig	exon	16330668	16330804	100	-	.	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 4274 4410 +
Chr2	stalkie_big_nohaplotig	exon	16330888	16331041	98	-	.	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 4120 4273 +
Chr2	stalkie_big_nohaplotig	exon	16331115	16332112	99	-	.	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 3122 4119 +
Chr2	stalkie_big_nohaplotig	exon	16332178	16332701	99	-	.	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 2598 3121 +
Chr2	stalkie_big_nohaplotig	exon	16332761	16332904	100	-	.	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 2454 2597 +
Chr2	stalkie_big_nohaplotig	exon	16333178	16333249	100	-	.	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 2382 2453 +
Chr2	stalkie_big_nohaplotig	exon	16333327	16333695	99	-	.	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 2013 2381 +
Chr2	stalkie_big_nohaplotig	exon	16333787	16333858	98	-	.	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 1941 2012 +
Chr2	stalkie_big_nohaplotig	exon	16333927	16334145	100	-	.	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 1722 1940 +
Chr2	stalkie_big_nohaplotig	exon	16334209	16334362	99	-	.	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 1568 1721 +
Chr2	stalkie_big_nohaplotig	exon	16334490	16334647	100	-	.	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 1410 1567 +
Chr2	stalkie_big_nohaplotig	exon	16334849	16335064	99	-	.	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 1194 1409 +
Chr2	stalkie_big_nohaplotig	exon	16335284	16335427	100	-	.	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 1050 1193 +
Chr2	stalkie_big_nohaplotig	exon	16335492	16335633	99	-	.	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 908 1049 +
Chr2	stalkie_big_nohaplotig	exon	16336802	16337037	100	-	.	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 672 907 +
Chr2	stalkie_big_nohaplotig	exon	16338486	16338629	100	-	.	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 528 671 +
Chr2	stalkie_big_nohaplotig	exon	16338795	16338866	100	-	.	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 456 527 +
Chr2	stalkie_big_nohaplotig	exon	16339031	16339102	100	-	.	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 384 455 +
Chr2	stalkie_big_nohaplotig	exon	16339185	16339256	100	-	.	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 312 383 +
Chr2	stalkie_big_nohaplotig	exon	16343241	16343551	100	-	.	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 1 311 +
Chr2	stalkie_big_nohaplotig	CDS	16330487	16330605	.	-	0	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 4411 4530 +
Chr2	stalkie_big_nohaplotig	CDS	16330668	16330804	.	-	2	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 4274 4410 +
Chr2	stalkie_big_nohaplotig	CDS	16330888	16331041	.	-	0	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 4120 4273 +
Chr2	stalkie_big_nohaplotig	CDS	16331115	16332112	.	-	2	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 3122 4119 +
Chr2	stalkie_big_nohaplotig	CDS	16332178	16332701	.	-	1	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 2598 3121 +
Chr2	stalkie_big_nohaplotig	CDS	16332761	16332904	.	-	1	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 2454 2597 +
Chr2	stalkie_big_nohaplotig	CDS	16333178	16333249	.	-	1	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 2382 2453 +
Chr2	stalkie_big_nohaplotig	CDS	16333327	16333695	.	-	1	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 2013 2381 +
Chr2	stalkie_big_nohaplotig	CDS	16333787	16333858	.	-	1	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 1941 2012 +
Chr2	stalkie_big_nohaplotig	CDS	16333927	16334145	.	-	1	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 1722 1940 +
Chr2	stalkie_big_nohaplotig	CDS	16334209	16334362	.	-	2	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 1568 1721 +
Chr2	stalkie_big_nohaplotig	CDS	16334490	16334647	.	-	1	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 1410 1567 +
Chr2	stalkie_big_nohaplotig	CDS	16334849	16335064	.	-	1	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 1194 1409 +
Chr2	stalkie_big_nohaplotig	CDS	16335284	16335427	.	-	1	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 1050 1193 +
Chr2	stalkie_big_nohaplotig	CDS	16335492	16335633	.	-	2	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 908 1049 +
Chr2	stalkie_big_nohaplotig	CDS	16336802	16337037	.	-	1	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 672 907 +
Chr2	stalkie_big_nohaplotig	CDS	16338486	16338629	.	-	1	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 528 671 +
Chr2	stalkie_big_nohaplotig	CDS	16338795	16338866	.	-	1	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 456 527 +
Chr2	stalkie_big_nohaplotig	CDS	16339031	16339102	.	-	1	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 384 455 +
Chr2	stalkie_big_nohaplotig	CDS	16339185	16339256	.	-	1	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 312 383 +
Chr2	stalkie_big_nohaplotig	CDS	16343241	16343551	.	-	0	Parent=FBgn0264089.1.mrna1;Target=FBgn0264089.1 1 311 +
Chr2	gffcl	locus	16398056	16406651	.	-	.	ID=RLOC_00015104;geneIDs=FBgn0011704.1.path1;transcripts=FBgn0011704.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16398056	16406651	.	-	.	ID=FBgn0011704.1.mrna1;geneID=FBgn0011704.1.path1;Name=FBgn0011704.1;Dir=sensecoverage=100.0;identity=99.7;matches=1187;mismatches=4;indels=0;unknowns=0;locus=RLOC_00015104
Chr2	stalkie_big_nohaplotig	exon	16398056	16398205	100	-	.	Parent=FBgn0011704.1.mrna1;Target=FBgn0011704.1 1042 1191 +
Chr2	stalkie_big_nohaplotig	exon	16398265	16398712	99	-	.	Parent=FBgn0011704.1.mrna1;Target=FBgn0011704.1 594 1041 +
Chr2	stalkie_big_nohaplotig	exon	16398769	16399049	99	-	.	Parent=FBgn0011704.1.mrna1;Target=FBgn0011704.1 313 593 +
Chr2	stalkie_big_nohaplotig	exon	16399440	16399670	100	-	.	Parent=FBgn0011704.1.mrna1;Target=FBgn0011704.1 82 312 +
Chr2	stalkie_big_nohaplotig	exon	16406571	16406651	98	-	.	Parent=FBgn0011704.1.mrna1;Target=FBgn0011704.1 1 81 +
Chr2	stalkie_big_nohaplotig	CDS	16398056	16398205	.	-	0	Parent=FBgn0011704.1.mrna1;Target=FBgn0011704.1 1042 1191 +
Chr2	stalkie_big_nohaplotig	CDS	16398265	16398712	.	-	1	Parent=FBgn0011704.1.mrna1;Target=FBgn0011704.1 594 1041 +
Chr2	stalkie_big_nohaplotig	CDS	16398769	16399049	.	-	0	Parent=FBgn0011704.1.mrna1;Target=FBgn0011704.1 313 593 +
Chr2	stalkie_big_nohaplotig	CDS	16399440	16399670	.	-	0	Parent=FBgn0011704.1.mrna1;Target=FBgn0011704.1 82 312 +
Chr2	stalkie_big_nohaplotig	CDS	16406571	16406651	.	-	0	Parent=FBgn0011704.1.mrna1;Target=FBgn0011704.1 1 81 +
Chr2	gffcl	locus	16408217	16409378	.	+	.	ID=RLOC_00015105;geneIDs=FBgn0033375.1.path1;transcripts=FBgn0033375.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16408217	16409378	.	+	.	ID=FBgn0033375.1.mrna1;geneID=FBgn0033375.1.path1;Name=FBgn0033375.1;Dir=sensecoverage=100.0;identity=99.2;matches=1039;mismatches=8;indels=0;unknowns=0;locus=RLOC_00015105
Chr2	stalkie_big_nohaplotig	exon	16408217	16408282	100	+	.	Parent=FBgn0033375.1.mrna1;Target=FBgn0033375.1 1 66 +
Chr2	stalkie_big_nohaplotig	exon	16408328	16408739	100	+	.	Parent=FBgn0033375.1.mrna1;Target=FBgn0033375.1 67 478 +
Chr2	stalkie_big_nohaplotig	exon	16408810	16409378	98	+	.	Parent=FBgn0033375.1.mrna1;Target=FBgn0033375.1 479 1047 +
Chr2	stalkie_big_nohaplotig	CDS	16408217	16408282	.	+	0	Parent=FBgn0033375.1.mrna1;Target=FBgn0033375.1 1 66 +
Chr2	stalkie_big_nohaplotig	CDS	16408328	16408739	.	+	0	Parent=FBgn0033375.1.mrna1;Target=FBgn0033375.1 67 478 +
Chr2	stalkie_big_nohaplotig	CDS	16408810	16409378	.	+	2	Parent=FBgn0033375.1.mrna1;Target=FBgn0033375.1 479 1047 +
Chr2	gffcl	locus	16423663	16426139	.	+	.	ID=RLOC_00015106;geneIDs=FBgn0033382.1.path1;transcripts=FBgn0033382.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16423663	16426139	.	+	.	ID=FBgn0033382.1.mrna1;geneID=FBgn0033382.1.path1;Name=FBgn0033382.1;Dir=sensecoverage=100.0;identity=99.7;matches=1277;mismatches=4;indels=0;unknowns=0;locus=RLOC_00015106
Chr2	stalkie_big_nohaplotig	exon	16423663	16423773	100	+	.	Parent=FBgn0033382.1.mrna1;Target=FBgn0033382.1 1 111 +
Chr2	stalkie_big_nohaplotig	exon	16423844	16424013	100	+	.	Parent=FBgn0033382.1.mrna1;Target=FBgn0033382.1 112 281 +
Chr2	stalkie_big_nohaplotig	exon	16424084	16424418	99	+	.	Parent=FBgn0033382.1.mrna1;Target=FBgn0033382.1 282 616 +
Chr2	stalkie_big_nohaplotig	exon	16424497	16424583	98	+	.	Parent=FBgn0033382.1.mrna1;Target=FBgn0033382.1 617 703 +
Chr2	stalkie_big_nohaplotig	exon	16424688	16424818	99	+	.	Parent=FBgn0033382.1.mrna1;Target=FBgn0033382.1 704 834 +
Chr2	stalkie_big_nohaplotig	exon	16425638	16425803	100	+	.	Parent=FBgn0033382.1.mrna1;Target=FBgn0033382.1 835 1000 +
Chr2	stalkie_big_nohaplotig	exon	16425859	16426139	100	+	.	Parent=FBgn0033382.1.mrna1;Target=FBgn0033382.1 1001 1281 +
Chr2	stalkie_big_nohaplotig	CDS	16423663	16423773	.	+	0	Parent=FBgn0033382.1.mrna1;Target=FBgn0033382.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	16423844	16424013	.	+	0	Parent=FBgn0033382.1.mrna1;Target=FBgn0033382.1 112 281 +
Chr2	stalkie_big_nohaplotig	CDS	16424084	16424418	.	+	1	Parent=FBgn0033382.1.mrna1;Target=FBgn0033382.1 282 616 +
Chr2	stalkie_big_nohaplotig	CDS	16424497	16424583	.	+	2	Parent=FBgn0033382.1.mrna1;Target=FBgn0033382.1 617 703 +
Chr2	stalkie_big_nohaplotig	CDS	16424688	16424818	.	+	2	Parent=FBgn0033382.1.mrna1;Target=FBgn0033382.1 704 834 +
Chr2	stalkie_big_nohaplotig	CDS	16425638	16425803	.	+	0	Parent=FBgn0033382.1.mrna1;Target=FBgn0033382.1 835 1000 +
Chr2	stalkie_big_nohaplotig	CDS	16425859	16426139	.	+	2	Parent=FBgn0033382.1.mrna1;Target=FBgn0033382.1 1001 1281 +
Chr2	gffcl	locus	16427169	16430246	.	-	.	ID=RLOC_00015107;geneIDs=FBgn0260972.1.path1;transcripts=FBgn0260972.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16427169	16430246	.	-	.	ID=FBgn0260972.1.mrna1;geneID=FBgn0260972.1.path1;Name=FBgn0260972.1;Dir=sensecoverage=100.0;identity=99.7;matches=1011;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015107
Chr2	stalkie_big_nohaplotig	exon	16427169	16427312	100	-	.	Parent=FBgn0260972.1.mrna1;Target=FBgn0260972.1 871 1014 +
Chr2	stalkie_big_nohaplotig	exon	16427373	16427603	100	-	.	Parent=FBgn0260972.1.mrna1;Target=FBgn0260972.1 640 870 +
Chr2	stalkie_big_nohaplotig	exon	16429608	16430246	99	-	.	Parent=FBgn0260972.1.mrna1;Target=FBgn0260972.1 1 639 +
Chr2	stalkie_big_nohaplotig	CDS	16427169	16427312	.	-	0	Parent=FBgn0260972.1.mrna1;Target=FBgn0260972.1 871 1014 +
Chr2	stalkie_big_nohaplotig	CDS	16427373	16427603	.	-	0	Parent=FBgn0260972.1.mrna1;Target=FBgn0260972.1 640 870 +
Chr2	stalkie_big_nohaplotig	CDS	16429608	16430246	.	-	0	Parent=FBgn0260972.1.mrna1;Target=FBgn0260972.1 1 639 +
Chr2	gffcl	locus	16432044	16432663	.	+	.	ID=RLOC_00015108;geneIDs=FBgn0085260.1.path1;transcripts=FBgn0085260.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16432044	16432663	.	+	.	ID=FBgn0085260.1.mrna1;geneID=FBgn0085260.1.path1;Name=FBgn0085260.1;Dir=sensecoverage=100.0;identity=99.6;matches=463;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015108
Chr2	stalkie_big_nohaplotig	exon	16432044	16432136	100	+	.	Parent=FBgn0085260.1.mrna1;Target=FBgn0085260.1 1 93 +
Chr2	stalkie_big_nohaplotig	exon	16432230	16432374	98	+	.	Parent=FBgn0085260.1.mrna1;Target=FBgn0085260.1 94 238 +
Chr2	stalkie_big_nohaplotig	exon	16432437	16432663	100	+	.	Parent=FBgn0085260.1.mrna1;Target=FBgn0085260.1 239 465 +
Chr2	stalkie_big_nohaplotig	CDS	16432044	16432136	.	+	0	Parent=FBgn0085260.1.mrna1;Target=FBgn0085260.1 1 93 +
Chr2	stalkie_big_nohaplotig	CDS	16432230	16432374	.	+	0	Parent=FBgn0085260.1.mrna1;Target=FBgn0085260.1 94 238 +
Chr2	stalkie_big_nohaplotig	CDS	16432437	16432663	.	+	2	Parent=FBgn0085260.1.mrna1;Target=FBgn0085260.1 239 465 +
Chr2	gffcl	locus	16432830	16434267	.	-	.	ID=RLOC_00015109;geneIDs=FBgn0033672.1.path1;transcripts=FBgn0033672.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16432830	16434267	.	-	.	ID=FBgn0033672.1.mrna1;geneID=FBgn0033672.1.path1;Name=FBgn0033672.1;Dir=sensecoverage=100.0;identity=99.9;matches=1097;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015109
Chr2	stalkie_big_nohaplotig	exon	16432830	16432911	100	-	.	Parent=FBgn0033672.1.mrna1;Target=FBgn0033672.1 1017 1098 +
Chr2	stalkie_big_nohaplotig	exon	16432966	16433063	100	-	.	Parent=FBgn0033672.1.mrna1;Target=FBgn0033672.1 919 1016 +
Chr2	stalkie_big_nohaplotig	exon	16433123	16433224	100	-	.	Parent=FBgn0033672.1.mrna1;Target=FBgn0033672.1 817 918 +
Chr2	stalkie_big_nohaplotig	exon	16433285	16433505	100	-	.	Parent=FBgn0033672.1.mrna1;Target=FBgn0033672.1 596 816 +
Chr2	stalkie_big_nohaplotig	exon	16433564	16433858	100	-	.	Parent=FBgn0033672.1.mrna1;Target=FBgn0033672.1 301 595 +
Chr2	stalkie_big_nohaplotig	exon	16433918	16434128	100	-	.	Parent=FBgn0033672.1.mrna1;Target=FBgn0033672.1 90 300 +
Chr2	stalkie_big_nohaplotig	exon	16434179	16434267	98	-	.	Parent=FBgn0033672.1.mrna1;Target=FBgn0033672.1 1 89 +
Chr2	stalkie_big_nohaplotig	CDS	16432830	16432911	.	-	1	Parent=FBgn0033672.1.mrna1;Target=FBgn0033672.1 1017 1098 +
Chr2	stalkie_big_nohaplotig	CDS	16432966	16433063	.	-	0	Parent=FBgn0033672.1.mrna1;Target=FBgn0033672.1 919 1016 +
Chr2	stalkie_big_nohaplotig	CDS	16433123	16433224	.	-	0	Parent=FBgn0033672.1.mrna1;Target=FBgn0033672.1 817 918 +
Chr2	stalkie_big_nohaplotig	CDS	16433285	16433505	.	-	2	Parent=FBgn0033672.1.mrna1;Target=FBgn0033672.1 596 816 +
Chr2	stalkie_big_nohaplotig	CDS	16433564	16433858	.	-	0	Parent=FBgn0033672.1.mrna1;Target=FBgn0033672.1 301 595 +
Chr2	stalkie_big_nohaplotig	CDS	16433918	16434128	.	-	1	Parent=FBgn0033672.1.mrna1;Target=FBgn0033672.1 90 300 +
Chr2	stalkie_big_nohaplotig	CDS	16434179	16434267	.	-	0	Parent=FBgn0033672.1.mrna1;Target=FBgn0033672.1 1 89 +
Chr2	gffcl	locus	16434585	16439069	.	+	.	ID=RLOC_00015110;geneIDs=FBgn0033199.1.path1;transcripts=FBgn0033199.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16434585	16439069	.	+	.	ID=FBgn0033199.1.mrna1;geneID=FBgn0033199.1.path1;Name=FBgn0033199.1;Dir=sensecoverage=100.0;identity=99.6;matches=834;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015110
Chr2	stalkie_big_nohaplotig	exon	16434585	16434670	100	+	.	Parent=FBgn0033199.1.mrna1;Target=FBgn0033199.1 1 86 +
Chr2	stalkie_big_nohaplotig	exon	16434728	16434938	99	+	.	Parent=FBgn0033199.1.mrna1;Target=FBgn0033199.1 87 297 +
Chr2	stalkie_big_nohaplotig	exon	16434997	16435279	100	+	.	Parent=FBgn0033199.1.mrna1;Target=FBgn0033199.1 298 580 +
Chr2	stalkie_big_nohaplotig	exon	16438813	16439069	99	+	.	Parent=FBgn0033199.1.mrna1;Target=FBgn0033199.1 581 837 +
Chr2	stalkie_big_nohaplotig	CDS	16434585	16434670	.	+	0	Parent=FBgn0033199.1.mrna1;Target=FBgn0033199.1 1 86 +
Chr2	stalkie_big_nohaplotig	CDS	16434728	16434938	.	+	1	Parent=FBgn0033199.1.mrna1;Target=FBgn0033199.1 87 297 +
Chr2	stalkie_big_nohaplotig	CDS	16434997	16435279	.	+	0	Parent=FBgn0033199.1.mrna1;Target=FBgn0033199.1 298 580 +
Chr2	stalkie_big_nohaplotig	CDS	16438813	16439069	.	+	2	Parent=FBgn0033199.1.mrna1;Target=FBgn0033199.1 581 837 +
Chr2	gffcl	locus	16437301	16438605	.	+	.	ID=RLOC_00015111;geneIDs=FBgn0028687.1.path1;transcripts=FBgn0028687.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16437301	16438605	.	+	.	ID=FBgn0028687.1.mrna1;geneID=FBgn0028687.1.path1;Name=FBgn0028687.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1300;mismatches=5;indels=0;unknowns=0;Target=FBgn0028687.1 1305 1 .;locus=RLOC_00015111
Chr2	stalkie_big_nohaplotig	exon	16437301	16438605	99	+	.	Parent=FBgn0028687.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16437301	16438605	.	+	0	Parent=FBgn0028687.1.mrna1
Chr2	gffcl	locus	16440850	16443796	.	-	.	ID=RLOC_00015112;geneIDs=FBgn0040091.1.path1;transcripts=FBgn0040091.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16440850	16443796	.	-	.	ID=FBgn0040091.1.mrna1;geneID=FBgn0040091.1.path1;Name=FBgn0040091.1;Dir=sensecoverage=100.0;identity=99.3;matches=1624;mismatches=11;indels=0;unknowns=0;locus=RLOC_00015112
Chr2	stalkie_big_nohaplotig	exon	16440850	16441724	99	-	.	Parent=FBgn0040091.1.mrna1;Target=FBgn0040091.1 761 1635 +
Chr2	stalkie_big_nohaplotig	exon	16441815	16442276	99	-	.	Parent=FBgn0040091.1.mrna1;Target=FBgn0040091.1 299 760 +
Chr2	stalkie_big_nohaplotig	exon	16442337	16442427	100	-	.	Parent=FBgn0040091.1.mrna1;Target=FBgn0040091.1 208 298 +
Chr2	stalkie_big_nohaplotig	exon	16442502	16442660	98	-	.	Parent=FBgn0040091.1.mrna1;Target=FBgn0040091.1 49 207 +
Chr2	stalkie_big_nohaplotig	exon	16443749	16443796	100	-	.	Parent=FBgn0040091.1.mrna1;Target=FBgn0040091.1 1 48 +
Chr2	stalkie_big_nohaplotig	CDS	16440850	16441724	.	-	2	Parent=FBgn0040091.1.mrna1;Target=FBgn0040091.1 761 1635 +
Chr2	stalkie_big_nohaplotig	CDS	16441815	16442276	.	-	2	Parent=FBgn0040091.1.mrna1;Target=FBgn0040091.1 299 760 +
Chr2	stalkie_big_nohaplotig	CDS	16442337	16442427	.	-	0	Parent=FBgn0040091.1.mrna1;Target=FBgn0040091.1 208 298 +
Chr2	stalkie_big_nohaplotig	CDS	16442502	16442660	.	-	0	Parent=FBgn0040091.1.mrna1;Target=FBgn0040091.1 49 207 +
Chr2	stalkie_big_nohaplotig	CDS	16443749	16443796	.	-	0	Parent=FBgn0040091.1.mrna1;Target=FBgn0040091.1 1 48 +
Chr2	gffcl	locus	16474088	16485404	.	+	.	ID=RLOC_00015113;geneIDs=comp161360_c1_seq1.path1;transcripts=comp161360_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16474088	16485404	.	+	.	ID=comp161360_c1_seq1.mrna1;geneID=comp161360_c1_seq1.path1;Name=comp161360_c1_seq1;Dir=indeterminatecoverage=97.8;identity=98.2;matches=1512;mismatches=25;indels=2;unknowns=0;Target=comp161360_c1_seq1 822 505 .;locus=RLOC_00015113
Chr2	stalkie_big_nohaplotig	exon	16474088	16474092	100	+	.	Parent=comp161360_c1_seq1.mrna1;Target=comp161360_c1_seq1 40 36 .
Chr2	stalkie_big_nohaplotig	exon	16483873	16485404	98	+	.	Parent=comp161360_c1_seq1.mrna1;Target=comp161360_c1_seq1 1574 41 .
Chr2	stalkie_big_nohaplotig	CDS	16484337	16484654	.	+	0	Parent=comp161360_c1_seq1.mrna1
Chr2	gffcl	locus	16486249	16487102	.	-	.	ID=RLOC_00015114;geneIDs=comp119030_c0_seq1.path1;transcripts=comp119030_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16486249	16487102	.	-	.	ID=comp119030_c0_seq1.mrna1;geneID=comp119030_c0_seq1.path1;Name=comp119030_c0_seq1;Dir=indeterminatecoverage=94.0;identity=97.6;matches=839;mismatches=10;indels=11;unknowns=0;Target=comp119030_c0_seq1 910 56 .;CDS_Target=comp119030_c0_seq1 738 589 .;locus=RLOC_00015114
Chr2	stalkie_big_nohaplotig	exon	16486249	16487102	97	-	.	Parent=comp119030_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16486415	16486564	.	-	0	Parent=comp119030_c0_seq1.mrna1
Chr2	gffcl	locus	16489886	16490903	.	+	.	ID=RLOC_00015115;geneIDs=comp162356_c1_seq1.path8;transcripts=comp162356_c1_seq1.mrna8
Chr2	stalkie_big_nohaplotig	mRNA	16489886	16490903	.	+	.	ID=comp162356_c1_seq1.mrna8;geneID=comp162356_c1_seq1.path8;Name=comp162356_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1014;mismatches=4;indels=0;unknowns=0;Target=comp162356_c1_seq1 1018 1 .;CDS_Target=comp162356_c1_seq1 1017 1 .;locus=RLOC_00015115
Chr2	stalkie_big_nohaplotig	exon	16489886	16490903	99	+	.	Parent=comp162356_c1_seq1.mrna8
Chr2	stalkie_big_nohaplotig	CDS	16489886	16490902	.	+	0	Parent=comp162356_c1_seq1.mrna8
Chr2	gffcl	locus	16506155	16512877	.	+	.	ID=RLOC_00015116;geneIDs=FBgn0016047.path1;transcripts=FBgn0016047.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16506155	16512877	.	+	.	ID=FBgn0016047.mrna1;geneID=FBgn0016047.path1;Name=FBgn0016047;Dir=sensecoverage=100.0;identity=99.8;matches=653;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015116
Chr2	stalkie_big_nohaplotig	exon	16506155	16506238	100	+	.	Parent=FBgn0016047.mrna1;Target=FBgn0016047 1 84 +
Chr2	stalkie_big_nohaplotig	exon	16506316	16506485	100	+	.	Parent=FBgn0016047.mrna1;Target=FBgn0016047 85 254 +
Chr2	stalkie_big_nohaplotig	exon	16507445	16507666	100	+	.	Parent=FBgn0016047.mrna1;Target=FBgn0016047 255 476 +
Chr2	stalkie_big_nohaplotig	exon	16507738	16507863	99	+	.	Parent=FBgn0016047.mrna1;Target=FBgn0016047 477 602 +
Chr2	stalkie_big_nohaplotig	exon	16512826	16512877	100	+	.	Parent=FBgn0016047.mrna1;Target=FBgn0016047 603 654 +
Chr2	stalkie_big_nohaplotig	CDS	16506155	16506238	.	+	0	Parent=FBgn0016047.mrna1;Target=FBgn0016047 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	16506316	16506485	.	+	0	Parent=FBgn0016047.mrna1;Target=FBgn0016047 85 254 +
Chr2	stalkie_big_nohaplotig	CDS	16507445	16507666	.	+	1	Parent=FBgn0016047.mrna1;Target=FBgn0016047 255 476 +
Chr2	stalkie_big_nohaplotig	CDS	16507738	16507863	.	+	1	Parent=FBgn0016047.mrna1;Target=FBgn0016047 477 602 +
Chr2	stalkie_big_nohaplotig	CDS	16512826	16512877	.	+	1	Parent=FBgn0016047.mrna1;Target=FBgn0016047 603 654 +
Chr2	gffcl	locus	16508093	16510584	.	-	.	ID=RLOC_00015117;geneIDs=comp127269_c0_seq1.path1;transcripts=comp127269_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16508093	16510584	.	-	.	ID=comp127269_c0_seq1.mrna1;geneID=comp127269_c0_seq1.path1;Name=comp127269_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=533;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015117
Chr2	stalkie_big_nohaplotig	exon	16508093	16508342	100	-	.	Parent=comp127269_c0_seq1.mrna1;Target=comp127269_c0_seq1 286 535 +
Chr2	stalkie_big_nohaplotig	exon	16510300	16510584	99	-	.	Parent=comp127269_c0_seq1.mrna1;Target=comp127269_c0_seq1 1 285 +
Chr2	stalkie_big_nohaplotig	CDS	16508218	16508342	.	-	2	Parent=comp127269_c0_seq1.mrna1;Target=comp127269_c0_seq1 286 410 +
Chr2	stalkie_big_nohaplotig	CDS	16510300	16510369	.	-	0	Parent=comp127269_c0_seq1.mrna1;Target=comp127269_c0_seq1 216 285 +
Chr2	gffcl	locus	16524003	16524568	.	-	.	ID=RLOC_00015118;geneIDs=comp134631_c1_seq1.path1;transcripts=comp134631_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16524003	16524568	.	-	.	ID=comp134631_c1_seq1.mrna1;geneID=comp134631_c1_seq1.path1;Name=comp134631_c1_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=504;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015118
Chr2	stalkie_big_nohaplotig	exon	16524003	16524461	100	-	.	Parent=comp134631_c1_seq1.mrna1;Target=comp134631_c1_seq1 1 459 -
Chr2	stalkie_big_nohaplotig	exon	16524524	16524568	100	-	.	Parent=comp134631_c1_seq1.mrna1;Target=comp134631_c1_seq1 460 504 -
Chr2	stalkie_big_nohaplotig	CDS	16524284	16524461	.	-	1	Parent=comp134631_c1_seq1.mrna1;Target=comp134631_c1_seq1 282 459 .
Chr2	stalkie_big_nohaplotig	CDS	16524524	16524567	.	-	0	Parent=comp134631_c1_seq1.mrna1;Target=comp134631_c1_seq1 460 503 .
Chr2	gffcl	locus	16524894	16525750	.	-	.	ID=RLOC_00015119;geneIDs=FBgn0038037.1.path2;transcripts=FBgn0038037.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	16524894	16525750	.	-	.	ID=FBgn0038037.1.mrna2;geneID=FBgn0038037.1.path2;Name=FBgn0038037.1;Dir=sensecoverage=85.2;identity=98.9;matches=781;mismatches=9;indels=0;unknowns=0;locus=RLOC_00015119
Chr2	stalkie_big_nohaplotig	exon	16524894	16525175	98	-	.	Parent=FBgn0038037.1.mrna2;Target=FBgn0038037.1 646 927 +
Chr2	stalkie_big_nohaplotig	exon	16525243	16525750	98	-	.	Parent=FBgn0038037.1.mrna2;Target=FBgn0038037.1 138 645 +
Chr2	stalkie_big_nohaplotig	CDS	16524894	16525175	.	-	1	Parent=FBgn0038037.1.mrna2;Target=FBgn0038037.1 646 927 +
Chr2	stalkie_big_nohaplotig	CDS	16525243	16525750	.	-	2	Parent=FBgn0038037.1.mrna2;Target=FBgn0038037.1 138 645 +
Chr2	gffcl	locus	16574152	16592964	.	-	.	ID=RLOC_00015120;geneIDs=FBgn0060296.1.path1;transcripts=FBgn0060296.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16574152	16592964	.	-	.	ID=FBgn0060296.1.mrna1;geneID=FBgn0060296.1.path1;Name=FBgn0060296.1;Dir=sensecoverage=100.0;identity=99.6;matches=2799;mismatches=10;indels=2;unknowns=0;locus=RLOC_00015120
Chr2	stalkie_big_nohaplotig	exon	16574152	16574709	99	-	.	Parent=FBgn0060296.1.mrna1;Target=FBgn0060296.1 2254 2811 +
Chr2	stalkie_big_nohaplotig	exon	16574771	16576735	99	-	.	Parent=FBgn0060296.1.mrna1;Target=FBgn0060296.1 289 2253 +
Chr2	stalkie_big_nohaplotig	exon	16592521	16592703	99	-	.	Parent=FBgn0060296.1.mrna1;Target=FBgn0060296.1 106 288 +
Chr2	stalkie_big_nohaplotig	exon	16592862	16592964	97	-	.	Parent=FBgn0060296.1.mrna1;Target=FBgn0060296.1 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	16574152	16574709	.	-	0	Parent=FBgn0060296.1.mrna1;Target=FBgn0060296.1 2254 2811 +
Chr2	stalkie_big_nohaplotig	CDS	16574771	16576735	.	-	0	Parent=FBgn0060296.1.mrna1;Target=FBgn0060296.1 289 2253 +
Chr2	stalkie_big_nohaplotig	CDS	16592521	16592703	.	-	0	Parent=FBgn0060296.1.mrna1;Target=FBgn0060296.1 106 288 +
Chr2	stalkie_big_nohaplotig	CDS	16592862	16592918	.	-	0	Parent=FBgn0060296.1.mrna1;Target=FBgn0060296.1 49 105 +
Chr2	gffcl	locus	16631100	16631577	.	-	.	ID=RLOC_00015123;geneIDs=comp157122_c0_seq1.path1;transcripts=comp157122_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16631100	16631577	.	-	.	ID=comp157122_c0_seq1.mrna1;geneID=comp157122_c0_seq1.path1;Name=comp157122_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=473;mismatches=5;indels=2;unknowns=0;Target=comp157122_c0_seq1 480 1 .;CDS_Target=comp157122_c0_seq1 480 244 .;locus=RLOC_00015123
Chr2	stalkie_big_nohaplotig	exon	16631100	16631577	98	-	.	Parent=comp157122_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16631100	16631336	.	-	0	Parent=comp157122_c0_seq1.mrna1
Chr2	gffcl	locus	16688864	16691476	.	+	.	ID=RLOC_00015124;geneIDs=FBgn0025390.path1;transcripts=FBgn0025390.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16688864	16691476	.	+	.	ID=FBgn0025390.mrna1;geneID=FBgn0025390.path1;Name=FBgn0025390;Dir=sensecoverage=100.0;identity=99.7;matches=1044;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015124
Chr2	stalkie_big_nohaplotig	exon	16688864	16689127	99	+	.	Parent=FBgn0025390.mrna1;Target=FBgn0025390 1 264 +
Chr2	stalkie_big_nohaplotig	exon	16690495	16690590	100	+	.	Parent=FBgn0025390.mrna1;Target=FBgn0025390 265 360 +
Chr2	stalkie_big_nohaplotig	exon	16690661	16690774	99	+	.	Parent=FBgn0025390.mrna1;Target=FBgn0025390 361 474 +
Chr2	stalkie_big_nohaplotig	exon	16690837	16691158	100	+	.	Parent=FBgn0025390.mrna1;Target=FBgn0025390 475 796 +
Chr2	stalkie_big_nohaplotig	exon	16691226	16691476	99	+	.	Parent=FBgn0025390.mrna1;Target=FBgn0025390 797 1047 +
Chr2	stalkie_big_nohaplotig	CDS	16688864	16689127	.	+	0	Parent=FBgn0025390.mrna1;Target=FBgn0025390 1 264 +
Chr2	stalkie_big_nohaplotig	CDS	16690495	16690590	.	+	0	Parent=FBgn0025390.mrna1;Target=FBgn0025390 265 360 +
Chr2	stalkie_big_nohaplotig	CDS	16690661	16690774	.	+	0	Parent=FBgn0025390.mrna1;Target=FBgn0025390 361 474 +
Chr2	stalkie_big_nohaplotig	CDS	16690837	16691158	.	+	0	Parent=FBgn0025390.mrna1;Target=FBgn0025390 475 796 +
Chr2	stalkie_big_nohaplotig	CDS	16691226	16691476	.	+	2	Parent=FBgn0025390.mrna1;Target=FBgn0025390 797 1047 +
Chr2	gffcl	locus	16694961	16695282	.	-	.	ID=RLOC_00015125;geneIDs=comp157021_c0_seq1.path1;transcripts=comp157021_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16694961	16695282	.	-	.	ID=comp157021_c0_seq1.mrna1;geneID=comp157021_c0_seq1.path1;Name=comp157021_c0_seq1;Dir=indeterminatecoverage=79.3;identity=96.0;matches=309;mismatches=13;indels=0;unknowns=0;Target=comp157021_c0_seq1 406 85 .;CDS_Target=comp157021_c0_seq1 405 85 .;locus=RLOC_00015125
Chr2	stalkie_big_nohaplotig	exon	16694961	16695282	95	-	.	Parent=comp157021_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16694962	16695282	.	-	0	Parent=comp157021_c0_seq1.mrna1
Chr2	gffcl	locus	16699408	16701017	.	+	.	ID=RLOC_00015127;geneIDs=FBgn0033616.1.path1;transcripts=FBgn0033616.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16699408	16701017	.	+	.	ID=FBgn0033616.1.mrna1;geneID=FBgn0033616.1.path1;Name=FBgn0033616.1;Dir=sensecoverage=100.0;identity=99.9;matches=1480;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015127
Chr2	stalkie_big_nohaplotig	exon	16699408	16699585	100	+	.	Parent=FBgn0033616.1.mrna1;Target=FBgn0033616.1 1 178 +
Chr2	stalkie_big_nohaplotig	exon	16699656	16700333	99	+	.	Parent=FBgn0033616.1.mrna1;Target=FBgn0033616.1 179 856 +
Chr2	stalkie_big_nohaplotig	exon	16700392	16701017	100	+	.	Parent=FBgn0033616.1.mrna1;Target=FBgn0033616.1 857 1482 +
Chr2	stalkie_big_nohaplotig	CDS	16699408	16699585	.	+	0	Parent=FBgn0033616.1.mrna1;Target=FBgn0033616.1 1 178 +
Chr2	stalkie_big_nohaplotig	CDS	16699656	16700333	.	+	2	Parent=FBgn0033616.1.mrna1;Target=FBgn0033616.1 179 856 +
Chr2	stalkie_big_nohaplotig	CDS	16700392	16701017	.	+	2	Parent=FBgn0033616.1.mrna1;Target=FBgn0033616.1 857 1482 +
Chr2	gffcl	locus	16704480	16709419	.	+	.	ID=RLOC_00015128;geneIDs=FBgn0025373.1.path1;transcripts=FBgn0025373.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16704480	16709419	.	+	.	ID=FBgn0025373.1.mrna1;geneID=FBgn0025373.1.path1;Name=FBgn0025373.1;Dir=sensecoverage=100.0;identity=99.8;matches=1306;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015128
Chr2	stalkie_big_nohaplotig	exon	16704480	16704712	99	+	.	Parent=FBgn0025373.1.mrna1;Target=FBgn0025373.1 1 233 +
Chr2	stalkie_big_nohaplotig	exon	16707427	16707521	100	+	.	Parent=FBgn0025373.1.mrna1;Target=FBgn0025373.1 234 328 +
Chr2	stalkie_big_nohaplotig	exon	16707859	16707929	100	+	.	Parent=FBgn0025373.1.mrna1;Target=FBgn0025373.1 329 399 +
Chr2	stalkie_big_nohaplotig	exon	16707999	16708139	100	+	.	Parent=FBgn0025373.1.mrna1;Target=FBgn0025373.1 400 540 +
Chr2	stalkie_big_nohaplotig	exon	16708199	16708560	100	+	.	Parent=FBgn0025373.1.mrna1;Target=FBgn0025373.1 541 902 +
Chr2	stalkie_big_nohaplotig	exon	16708850	16709076	100	+	.	Parent=FBgn0025373.1.mrna1;Target=FBgn0025373.1 903 1129 +
Chr2	stalkie_big_nohaplotig	exon	16709241	16709419	100	+	.	Parent=FBgn0025373.1.mrna1;Target=FBgn0025373.1 1130 1308 +
Chr2	stalkie_big_nohaplotig	CDS	16704480	16704712	.	+	0	Parent=FBgn0025373.1.mrna1;Target=FBgn0025373.1 1 233 +
Chr2	stalkie_big_nohaplotig	CDS	16707427	16707521	.	+	1	Parent=FBgn0025373.1.mrna1;Target=FBgn0025373.1 234 328 +
Chr2	stalkie_big_nohaplotig	CDS	16707859	16707929	.	+	2	Parent=FBgn0025373.1.mrna1;Target=FBgn0025373.1 329 399 +
Chr2	stalkie_big_nohaplotig	CDS	16707999	16708139	.	+	0	Parent=FBgn0025373.1.mrna1;Target=FBgn0025373.1 400 540 +
Chr2	stalkie_big_nohaplotig	CDS	16708199	16708560	.	+	0	Parent=FBgn0025373.1.mrna1;Target=FBgn0025373.1 541 902 +
Chr2	stalkie_big_nohaplotig	CDS	16708850	16709076	.	+	1	Parent=FBgn0025373.1.mrna1;Target=FBgn0025373.1 903 1129 +
Chr2	stalkie_big_nohaplotig	CDS	16709241	16709419	.	+	2	Parent=FBgn0025373.1.mrna1;Target=FBgn0025373.1 1130 1308 +
Chr2	gffcl	locus	16709705	16712588	.	-	.	ID=RLOC_00015129;geneIDs=FBgn0033615.1.path1;transcripts=FBgn0033615.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16709705	16712588	.	-	.	ID=FBgn0033615.1.mrna1;geneID=FBgn0033615.1.path1;Name=FBgn0033615.1;Dir=sensecoverage=100.0;identity=99.6;matches=1563;mismatches=6;indels=0;unknowns=0;locus=RLOC_00015129
Chr2	stalkie_big_nohaplotig	exon	16709705	16709843	98	-	.	Parent=FBgn0033615.1.mrna1;Target=FBgn0033615.1 1431 1569 +
Chr2	stalkie_big_nohaplotig	exon	16709908	16710062	100	-	.	Parent=FBgn0033615.1.mrna1;Target=FBgn0033615.1 1276 1430 +
Chr2	stalkie_big_nohaplotig	exon	16710843	16711171	99	-	.	Parent=FBgn0033615.1.mrna1;Target=FBgn0033615.1 947 1275 +
Chr2	stalkie_big_nohaplotig	exon	16711228	16711348	99	-	.	Parent=FBgn0033615.1.mrna1;Target=FBgn0033615.1 826 946 +
Chr2	stalkie_big_nohaplotig	exon	16711418	16711631	100	-	.	Parent=FBgn0033615.1.mrna1;Target=FBgn0033615.1 612 825 +
Chr2	stalkie_big_nohaplotig	exon	16711700	16711803	100	-	.	Parent=FBgn0033615.1.mrna1;Target=FBgn0033615.1 508 611 +
Chr2	stalkie_big_nohaplotig	exon	16711871	16712088	99	-	.	Parent=FBgn0033615.1.mrna1;Target=FBgn0033615.1 290 507 +
Chr2	stalkie_big_nohaplotig	exon	16712164	16712265	99	-	.	Parent=FBgn0033615.1.mrna1;Target=FBgn0033615.1 188 289 +
Chr2	stalkie_big_nohaplotig	exon	16712340	16712506	100	-	.	Parent=FBgn0033615.1.mrna1;Target=FBgn0033615.1 21 187 +
Chr2	stalkie_big_nohaplotig	exon	16712569	16712588	100	-	.	Parent=FBgn0033615.1.mrna1;Target=FBgn0033615.1 1 20 +
Chr2	stalkie_big_nohaplotig	CDS	16709705	16709843	.	-	1	Parent=FBgn0033615.1.mrna1;Target=FBgn0033615.1 1431 1569 +
Chr2	stalkie_big_nohaplotig	CDS	16709908	16710062	.	-	0	Parent=FBgn0033615.1.mrna1;Target=FBgn0033615.1 1276 1430 +
Chr2	stalkie_big_nohaplotig	CDS	16710843	16711171	.	-	2	Parent=FBgn0033615.1.mrna1;Target=FBgn0033615.1 947 1275 +
Chr2	stalkie_big_nohaplotig	CDS	16711228	16711348	.	-	0	Parent=FBgn0033615.1.mrna1;Target=FBgn0033615.1 826 946 +
Chr2	stalkie_big_nohaplotig	CDS	16711418	16711631	.	-	1	Parent=FBgn0033615.1.mrna1;Target=FBgn0033615.1 612 825 +
Chr2	stalkie_big_nohaplotig	CDS	16711700	16711803	.	-	0	Parent=FBgn0033615.1.mrna1;Target=FBgn0033615.1 508 611 +
Chr2	stalkie_big_nohaplotig	CDS	16711871	16712088	.	-	2	Parent=FBgn0033615.1.mrna1;Target=FBgn0033615.1 290 507 +
Chr2	stalkie_big_nohaplotig	CDS	16712164	16712265	.	-	2	Parent=FBgn0033615.1.mrna1;Target=FBgn0033615.1 188 289 +
Chr2	stalkie_big_nohaplotig	CDS	16712340	16712506	.	-	1	Parent=FBgn0033615.1.mrna1;Target=FBgn0033615.1 21 187 +
Chr2	stalkie_big_nohaplotig	CDS	16712569	16712588	.	-	0	Parent=FBgn0033615.1.mrna1;Target=FBgn0033615.1 1 20 +
Chr2	gffcl	locus	16712931	16713512	.	+	.	ID=RLOC_00015130;geneIDs=comp152757_c0_seq1.path1;transcripts=comp152757_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16712931	16713512	.	+	.	ID=comp152757_c0_seq1.mrna1;geneID=comp152757_c0_seq1.path1;Name=comp152757_c0_seq1;Dir=indeterminatecoverage=99.8;identity=96.0;matches=559;mismatches=23;indels=0;unknowns=0;Target=comp152757_c0_seq1 582 1 .;CDS_Target=comp152757_c0_seq1 426 247 .;locus=RLOC_00015130
Chr2	stalkie_big_nohaplotig	exon	16712931	16713512	96	+	.	Parent=comp152757_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16713177	16713356	.	+	0	Parent=comp152757_c0_seq1.mrna1
Chr2	gffcl	locus	16713684	16715458	.	-	.	ID=RLOC_00015131;geneIDs=FBgn0034372.1.path1;transcripts=FBgn0034372.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16713684	16715458	.	-	.	ID=FBgn0034372.1.mrna1;geneID=FBgn0034372.1.path1;Name=FBgn0034372.1;Dir=sensecoverage=100.0;identity=99.4;matches=1312;mismatches=8;indels=0;unknowns=0;locus=RLOC_00015131
Chr2	stalkie_big_nohaplotig	exon	16713684	16713792	100	-	.	Parent=FBgn0034372.1.mrna1;Target=FBgn0034372.1 1212 1320 +
Chr2	stalkie_big_nohaplotig	exon	16713852	16714000	98	-	.	Parent=FBgn0034372.1.mrna1;Target=FBgn0034372.1 1063 1211 +
Chr2	stalkie_big_nohaplotig	exon	16714059	16714482	98	-	.	Parent=FBgn0034372.1.mrna1;Target=FBgn0034372.1 639 1062 +
Chr2	stalkie_big_nohaplotig	exon	16714540	16714634	100	-	.	Parent=FBgn0034372.1.mrna1;Target=FBgn0034372.1 544 638 +
Chr2	stalkie_big_nohaplotig	exon	16714688	16715167	100	-	.	Parent=FBgn0034372.1.mrna1;Target=FBgn0034372.1 64 543 +
Chr2	stalkie_big_nohaplotig	exon	16715396	16715458	100	-	.	Parent=FBgn0034372.1.mrna1;Target=FBgn0034372.1 1 63 +
Chr2	stalkie_big_nohaplotig	CDS	16713684	16713792	.	-	1	Parent=FBgn0034372.1.mrna1;Target=FBgn0034372.1 1212 1320 +
Chr2	stalkie_big_nohaplotig	CDS	16713852	16714000	.	-	0	Parent=FBgn0034372.1.mrna1;Target=FBgn0034372.1 1063 1211 +
Chr2	stalkie_big_nohaplotig	CDS	16714059	16714482	.	-	1	Parent=FBgn0034372.1.mrna1;Target=FBgn0034372.1 639 1062 +
Chr2	stalkie_big_nohaplotig	CDS	16714540	16714634	.	-	0	Parent=FBgn0034372.1.mrna1;Target=FBgn0034372.1 544 638 +
Chr2	stalkie_big_nohaplotig	CDS	16714688	16715167	.	-	0	Parent=FBgn0034372.1.mrna1;Target=FBgn0034372.1 64 543 +
Chr2	stalkie_big_nohaplotig	CDS	16715396	16715458	.	-	0	Parent=FBgn0034372.1.mrna1;Target=FBgn0034372.1 1 63 +
Chr2	gffcl	locus	16727863	16729076	.	-	.	ID=RLOC_00015132;geneIDs=ORF2360.path1;transcripts=ORF2360.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16727863	16729076	.	-	.	ID=ORF2360.mrna1;geneID=ORF2360.path1;Name=ORF2360;Dir=sensecoverage=100.0;identity=99.4;matches=865;mismatches=5;indels=0;unknowns=0;locus=RLOC_00015132
Chr2	stalkie_big_nohaplotig	exon	16727863	16728261	100	-	.	Parent=ORF2360.mrna1;Target=ORF2360 472 870 +
Chr2	stalkie_big_nohaplotig	exon	16728351	16728607	98	-	.	Parent=ORF2360.mrna1;Target=ORF2360 215 471 +
Chr2	stalkie_big_nohaplotig	exon	16728717	16728790	98	-	.	Parent=ORF2360.mrna1;Target=ORF2360 141 214 +
Chr2	stalkie_big_nohaplotig	exon	16728860	16728937	100	-	.	Parent=ORF2360.mrna1;Target=ORF2360 63 140 +
Chr2	stalkie_big_nohaplotig	exon	16729015	16729076	98	-	.	Parent=ORF2360.mrna1;Target=ORF2360 1 62 +
Chr2	stalkie_big_nohaplotig	CDS	16727863	16728261	.	-	0	Parent=ORF2360.mrna1;Target=ORF2360 472 870 +
Chr2	stalkie_big_nohaplotig	CDS	16728351	16728607	.	-	2	Parent=ORF2360.mrna1;Target=ORF2360 215 471 +
Chr2	stalkie_big_nohaplotig	CDS	16728717	16728790	.	-	1	Parent=ORF2360.mrna1;Target=ORF2360 141 214 +
Chr2	stalkie_big_nohaplotig	CDS	16728860	16728937	.	-	1	Parent=ORF2360.mrna1;Target=ORF2360 63 140 +
Chr2	stalkie_big_nohaplotig	CDS	16729015	16729076	.	-	0	Parent=ORF2360.mrna1;Target=ORF2360 1 62 +
Chr2	gffcl	locus	16729993	16732483	.	-	.	ID=RLOC_00015133;geneIDs=ORF668.path1;transcripts=ORF668.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16729993	16732483	.	-	.	ID=ORF668.mrna1;geneID=ORF668.path1;Name=ORF668;Dir=sensecoverage=100.0;identity=99.5;matches=1538;mismatches=7;indels=0;unknowns=0;locus=RLOC_00015133
Chr2	stalkie_big_nohaplotig	exon	16729993	16730186	100	-	.	Parent=ORF668.mrna1;Target=ORF668 1352 1545 +
Chr2	stalkie_big_nohaplotig	exon	16730242	16730512	100	-	.	Parent=ORF668.mrna1;Target=ORF668 1081 1351 +
Chr2	stalkie_big_nohaplotig	exon	16730664	16730756	100	-	.	Parent=ORF668.mrna1;Target=ORF668 988 1080 +
Chr2	stalkie_big_nohaplotig	exon	16730820	16730906	100	-	.	Parent=ORF668.mrna1;Target=ORF668 901 987 +
Chr2	stalkie_big_nohaplotig	exon	16730964	16731345	99	-	.	Parent=ORF668.mrna1;Target=ORF668 519 900 +
Chr2	stalkie_big_nohaplotig	exon	16731415	16731522	99	-	.	Parent=ORF668.mrna1;Target=ORF668 411 518 +
Chr2	stalkie_big_nohaplotig	exon	16731584	16731664	97	-	.	Parent=ORF668.mrna1;Target=ORF668 330 410 +
Chr2	stalkie_big_nohaplotig	exon	16731719	16731760	100	-	.	Parent=ORF668.mrna1;Target=ORF668 288 329 +
Chr2	stalkie_big_nohaplotig	exon	16731813	16731848	100	-	.	Parent=ORF668.mrna1;Target=ORF668 252 287 +
Chr2	stalkie_big_nohaplotig	exon	16731903	16731941	100	-	.	Parent=ORF668.mrna1;Target=ORF668 213 251 +
Chr2	stalkie_big_nohaplotig	exon	16732008	16732079	98	-	.	Parent=ORF668.mrna1;Target=ORF668 141 212 +
Chr2	stalkie_big_nohaplotig	exon	16732146	16732205	98	-	.	Parent=ORF668.mrna1;Target=ORF668 81 140 +
Chr2	stalkie_big_nohaplotig	exon	16732345	16732389	100	-	.	Parent=ORF668.mrna1;Target=ORF668 36 80 +
Chr2	stalkie_big_nohaplotig	exon	16732449	16732483	100	-	.	Parent=ORF668.mrna1;Target=ORF668 1 35 +
Chr2	stalkie_big_nohaplotig	CDS	16729993	16730186	.	-	2	Parent=ORF668.mrna1;Target=ORF668 1352 1545 +
Chr2	stalkie_big_nohaplotig	CDS	16730242	16730512	.	-	0	Parent=ORF668.mrna1;Target=ORF668 1081 1351 +
Chr2	stalkie_big_nohaplotig	CDS	16730664	16730756	.	-	0	Parent=ORF668.mrna1;Target=ORF668 988 1080 +
Chr2	stalkie_big_nohaplotig	CDS	16730820	16730906	.	-	0	Parent=ORF668.mrna1;Target=ORF668 901 987 +
Chr2	stalkie_big_nohaplotig	CDS	16730964	16731345	.	-	1	Parent=ORF668.mrna1;Target=ORF668 519 900 +
Chr2	stalkie_big_nohaplotig	CDS	16731415	16731522	.	-	1	Parent=ORF668.mrna1;Target=ORF668 411 518 +
Chr2	stalkie_big_nohaplotig	CDS	16731584	16731664	.	-	1	Parent=ORF668.mrna1;Target=ORF668 330 410 +
Chr2	stalkie_big_nohaplotig	CDS	16731719	16731760	.	-	1	Parent=ORF668.mrna1;Target=ORF668 288 329 +
Chr2	stalkie_big_nohaplotig	CDS	16731813	16731848	.	-	1	Parent=ORF668.mrna1;Target=ORF668 252 287 +
Chr2	stalkie_big_nohaplotig	CDS	16731903	16731941	.	-	1	Parent=ORF668.mrna1;Target=ORF668 213 251 +
Chr2	stalkie_big_nohaplotig	CDS	16732008	16732079	.	-	1	Parent=ORF668.mrna1;Target=ORF668 141 212 +
Chr2	stalkie_big_nohaplotig	CDS	16732146	16732205	.	-	1	Parent=ORF668.mrna1;Target=ORF668 81 140 +
Chr2	stalkie_big_nohaplotig	CDS	16732345	16732389	.	-	1	Parent=ORF668.mrna1;Target=ORF668 36 80 +
Chr2	stalkie_big_nohaplotig	CDS	16732449	16732483	.	-	0	Parent=ORF668.mrna1;Target=ORF668 1 35 +
Chr2	gffcl	locus	16738570	16739099	.	-	.	ID=RLOC_00015134;geneIDs=FBgn0023214.1.path1;transcripts=FBgn0023214.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16738570	16739099	.	-	.	ID=FBgn0023214.1.mrna1;geneID=FBgn0023214.1.path1;Name=FBgn0023214.1;Dir=indeterminatecoverage=95.5;identity=100.0;matches=530;mismatches=0;indels=0;unknowns=0;Target=FBgn0023214.1 555 26 .;CDS_Target=FBgn0023214.1 555 28 .;locus=RLOC_00015134
Chr2	stalkie_big_nohaplotig	exon	16738570	16739099	100	-	.	Parent=FBgn0023214.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16738570	16739097	.	-	0	Parent=FBgn0023214.1.mrna1
Chr2	gffcl	locus	16758633	16759977	.	+	.	ID=RLOC_00015135;geneIDs=ORF834.path1;transcripts=ORF834.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16758633	16759977	.	+	.	ID=ORF834.mrna1;geneID=ORF834.path1;Name=ORF834;Dir=indeterminatecoverage=96.0;identity=99.8;matches=1342;mismatches=3;indels=0;unknowns=0;Target=ORF834 1401 57 .;CDS_Target=ORF834 1401 58 .;locus=RLOC_00015135
Chr2	stalkie_big_nohaplotig	exon	16758633	16759977	99	+	.	Parent=ORF834.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16758634	16759977	.	+	0	Parent=ORF834.mrna1
Chr2	gffcl	locus	16806673	16807497	.	+	.	ID=RLOC_00015136;geneIDs=ORF2668.path1;transcripts=ORF2668.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16806673	16807497	.	+	.	ID=ORF2668.mrna1;geneID=ORF2668.path1;Name=ORF2668;Dir=indeterminatecoverage=100.0;identity=99.4;matches=820;mismatches=5;indels=0;unknowns=0;Target=ORF2668 825 1 .;locus=RLOC_00015136
Chr2	stalkie_big_nohaplotig	exon	16806673	16807497	99	+	.	Parent=ORF2668.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16806673	16807497	.	+	0	Parent=ORF2668.mrna1
Chr2	gffcl	locus	16815676	16824280	.	+	.	ID=RLOC_00015137;geneIDs=FBgn0262103.1.path1;transcripts=FBgn0262103.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16815676	16824280	.	+	.	ID=FBgn0262103.1.mrna1;geneID=FBgn0262103.1.path1;Name=FBgn0262103.1;Dir=sensecoverage=95.5;identity=99.5;matches=4326;mismatches=21;indels=0;unknowns=0;locus=RLOC_00015137
Chr2	stalkie_big_nohaplotig	exon	16815676	16816011	99	+	.	Parent=FBgn0262103.1.mrna1;Target=FBgn0262103.1 205 540 +
Chr2	stalkie_big_nohaplotig	exon	16817397	16817652	99	+	.	Parent=FBgn0262103.1.mrna1;Target=FBgn0262103.1 541 796 +
Chr2	stalkie_big_nohaplotig	exon	16817727	16818135	99	+	.	Parent=FBgn0262103.1.mrna1;Target=FBgn0262103.1 797 1205 +
Chr2	stalkie_big_nohaplotig	exon	16818559	16818754	98	+	.	Parent=FBgn0262103.1.mrna1;Target=FBgn0262103.1 1206 1401 +
Chr2	stalkie_big_nohaplotig	exon	16818813	16819089	100	+	.	Parent=FBgn0262103.1.mrna1;Target=FBgn0262103.1 1402 1678 +
Chr2	stalkie_big_nohaplotig	exon	16819454	16819712	100	+	.	Parent=FBgn0262103.1.mrna1;Target=FBgn0262103.1 1679 1937 +
Chr2	stalkie_big_nohaplotig	exon	16819778	16820016	99	+	.	Parent=FBgn0262103.1.mrna1;Target=FBgn0262103.1 1938 2176 +
Chr2	stalkie_big_nohaplotig	exon	16820387	16820656	100	+	.	Parent=FBgn0262103.1.mrna1;Target=FBgn0262103.1 2177 2446 +
Chr2	stalkie_big_nohaplotig	exon	16821196	16821351	100	+	.	Parent=FBgn0262103.1.mrna1;Target=FBgn0262103.1 2447 2602 +
Chr2	stalkie_big_nohaplotig	exon	16821963	16823122	99	+	.	Parent=FBgn0262103.1.mrna1;Target=FBgn0262103.1 2603 3762 +
Chr2	stalkie_big_nohaplotig	exon	16823492	16824280	100	+	.	Parent=FBgn0262103.1.mrna1;Target=FBgn0262103.1 3763 4551 +
Chr2	stalkie_big_nohaplotig	CDS	16815676	16816011	.	+	0	Parent=FBgn0262103.1.mrna1;Target=FBgn0262103.1 205 540 +
Chr2	stalkie_big_nohaplotig	CDS	16817397	16817652	.	+	0	Parent=FBgn0262103.1.mrna1;Target=FBgn0262103.1 541 796 +
Chr2	stalkie_big_nohaplotig	CDS	16817727	16818135	.	+	2	Parent=FBgn0262103.1.mrna1;Target=FBgn0262103.1 797 1205 +
Chr2	stalkie_big_nohaplotig	CDS	16818559	16818754	.	+	1	Parent=FBgn0262103.1.mrna1;Target=FBgn0262103.1 1206 1401 +
Chr2	stalkie_big_nohaplotig	CDS	16818813	16819089	.	+	0	Parent=FBgn0262103.1.mrna1;Target=FBgn0262103.1 1402 1678 +
Chr2	stalkie_big_nohaplotig	CDS	16819454	16819712	.	+	2	Parent=FBgn0262103.1.mrna1;Target=FBgn0262103.1 1679 1937 +
Chr2	stalkie_big_nohaplotig	CDS	16819778	16820016	.	+	1	Parent=FBgn0262103.1.mrna1;Target=FBgn0262103.1 1938 2176 +
Chr2	stalkie_big_nohaplotig	CDS	16820387	16820656	.	+	2	Parent=FBgn0262103.1.mrna1;Target=FBgn0262103.1 2177 2446 +
Chr2	stalkie_big_nohaplotig	CDS	16821196	16821351	.	+	2	Parent=FBgn0262103.1.mrna1;Target=FBgn0262103.1 2447 2602 +
Chr2	stalkie_big_nohaplotig	CDS	16821963	16823122	.	+	2	Parent=FBgn0262103.1.mrna1;Target=FBgn0262103.1 2603 3762 +
Chr2	stalkie_big_nohaplotig	CDS	16823492	16824280	.	+	0	Parent=FBgn0262103.1.mrna1;Target=FBgn0262103.1 3763 4551 +
Chr2	gffcl	locus	16825595	16826826	.	-	.	ID=RLOC_00015138;geneIDs=comp152631_c1_seq1.path1;transcripts=comp152631_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16825595	16826826	.	-	.	ID=comp152631_c1_seq1.mrna1;geneID=comp152631_c1_seq1.path1;Name=comp152631_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=1219;mismatches=13;indels=14;unknowns=0;Target=comp152631_c1_seq1 1246 1 .;CDS_Target=comp152631_c1_seq1 91 2 .;locus=RLOC_00015138
Chr2	stalkie_big_nohaplotig	exon	16825595	16826826	97	-	.	Parent=comp152631_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16826736	16826825	.	-	0	Parent=comp152631_c1_seq1.mrna1
Chr2	gffcl	locus	16829064	16831878	.	+	.	ID=RLOC_00015139;geneIDs=FBgn0034379.2.path1;transcripts=FBgn0034379.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16829064	16831878	.	+	.	ID=FBgn0034379.2.mrna1;geneID=FBgn0034379.2.path1;Name=FBgn0034379.2;Dir=sensecoverage=100.0;identity=98.9;matches=1813;mismatches=19;indels=1;unknowns=0;locus=RLOC_00015139
Chr2	stalkie_big_nohaplotig	exon	16829064	16829222	98	+	.	Parent=FBgn0034379.2.mrna1;Target=FBgn0034379.2 1 159 +
Chr2	stalkie_big_nohaplotig	exon	16829280	16829739	99	+	.	Parent=FBgn0034379.2.mrna1;Target=FBgn0034379.2 160 619 +
Chr2	stalkie_big_nohaplotig	exon	16829793	16830279	98	+	.	Parent=FBgn0034379.2.mrna1;Target=FBgn0034379.2 620 1106 +
Chr2	stalkie_big_nohaplotig	exon	16830346	16830549	99	+	.	Parent=FBgn0034379.2.mrna1;Target=FBgn0034379.2 1107 1310 +
Chr2	stalkie_big_nohaplotig	exon	16830622	16830994	99	+	.	Parent=FBgn0034379.2.mrna1;Target=FBgn0034379.2 1311 1683 +
Chr2	stalkie_big_nohaplotig	exon	16831730	16831878	99	+	.	Parent=FBgn0034379.2.mrna1;Target=FBgn0034379.2 1684 1833 +
Chr2	stalkie_big_nohaplotig	CDS	16829064	16829222	.	+	0	Parent=FBgn0034379.2.mrna1;Target=FBgn0034379.2 1 159 +
Chr2	stalkie_big_nohaplotig	CDS	16829280	16829739	.	+	0	Parent=FBgn0034379.2.mrna1;Target=FBgn0034379.2 160 619 +
Chr2	stalkie_big_nohaplotig	CDS	16829793	16830279	.	+	2	Parent=FBgn0034379.2.mrna1;Target=FBgn0034379.2 620 1106 +
Chr2	stalkie_big_nohaplotig	CDS	16830346	16830549	.	+	1	Parent=FBgn0034379.2.mrna1;Target=FBgn0034379.2 1107 1310 +
Chr2	stalkie_big_nohaplotig	CDS	16830622	16830994	.	+	1	Parent=FBgn0034379.2.mrna1;Target=FBgn0034379.2 1311 1683 +
Chr2	stalkie_big_nohaplotig	CDS	16831730	16831878	.	+	0	Parent=FBgn0034379.2.mrna1;Target=FBgn0034379.2 1684 1833 +
Chr2	gffcl	locus	16832230	16835253	.	-	.	ID=RLOC_00015140;geneIDs=FBgn0034380.1.path1;transcripts=FBgn0034380.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16832230	16835253	.	-	.	ID=FBgn0034380.1.mrna1;geneID=FBgn0034380.1.path1;Name=FBgn0034380.1;Dir=sensecoverage=100.0;identity=99.5;matches=2196;mismatches=12;indels=0;unknowns=0;locus=RLOC_00015140
Chr2	stalkie_big_nohaplotig	exon	16832230	16832335	100	-	.	Parent=FBgn0034380.1.mrna1;Target=FBgn0034380.1 2103 2208 +
Chr2	stalkie_big_nohaplotig	exon	16832428	16832540	99	-	.	Parent=FBgn0034380.1.mrna1;Target=FBgn0034380.1 1990 2102 +
Chr2	stalkie_big_nohaplotig	exon	16832612	16832971	99	-	.	Parent=FBgn0034380.1.mrna1;Target=FBgn0034380.1 1630 1989 +
Chr2	stalkie_big_nohaplotig	exon	16833314	16833460	97	-	.	Parent=FBgn0034380.1.mrna1;Target=FBgn0034380.1 1483 1629 +
Chr2	stalkie_big_nohaplotig	exon	16833527	16833654	98	-	.	Parent=FBgn0034380.1.mrna1;Target=FBgn0034380.1 1355 1482 +
Chr2	stalkie_big_nohaplotig	exon	16833716	16834224	99	-	.	Parent=FBgn0034380.1.mrna1;Target=FBgn0034380.1 846 1354 +
Chr2	stalkie_big_nohaplotig	exon	16834281	16834405	100	-	.	Parent=FBgn0034380.1.mrna1;Target=FBgn0034380.1 721 845 +
Chr2	stalkie_big_nohaplotig	exon	16834469	16835095	99	-	.	Parent=FBgn0034380.1.mrna1;Target=FBgn0034380.1 94 720 +
Chr2	stalkie_big_nohaplotig	exon	16835161	16835253	100	-	.	Parent=FBgn0034380.1.mrna1;Target=FBgn0034380.1 1 93 +
Chr2	stalkie_big_nohaplotig	CDS	16832230	16832335	.	-	1	Parent=FBgn0034380.1.mrna1;Target=FBgn0034380.1 2103 2208 +
Chr2	stalkie_big_nohaplotig	CDS	16832428	16832540	.	-	0	Parent=FBgn0034380.1.mrna1;Target=FBgn0034380.1 1990 2102 +
Chr2	stalkie_big_nohaplotig	CDS	16832612	16832971	.	-	0	Parent=FBgn0034380.1.mrna1;Target=FBgn0034380.1 1630 1989 +
Chr2	stalkie_big_nohaplotig	CDS	16833314	16833460	.	-	0	Parent=FBgn0034380.1.mrna1;Target=FBgn0034380.1 1483 1629 +
Chr2	stalkie_big_nohaplotig	CDS	16833527	16833654	.	-	2	Parent=FBgn0034380.1.mrna1;Target=FBgn0034380.1 1355 1482 +
Chr2	stalkie_big_nohaplotig	CDS	16833716	16834224	.	-	1	Parent=FBgn0034380.1.mrna1;Target=FBgn0034380.1 846 1354 +
Chr2	stalkie_big_nohaplotig	CDS	16834281	16834405	.	-	0	Parent=FBgn0034380.1.mrna1;Target=FBgn0034380.1 721 845 +
Chr2	stalkie_big_nohaplotig	CDS	16834469	16835095	.	-	0	Parent=FBgn0034380.1.mrna1;Target=FBgn0034380.1 94 720 +
Chr2	stalkie_big_nohaplotig	CDS	16835161	16835253	.	-	0	Parent=FBgn0034380.1.mrna1;Target=FBgn0034380.1 1 93 +
Chr2	gffcl	locus	16836391	16838395	.	-	.	ID=RLOC_00015141;geneIDs=FBgn0001133.1.path1;transcripts=FBgn0001133.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16836391	16838395	.	-	.	ID=FBgn0001133.1.mrna1;geneID=FBgn0001133.1.path1;Name=FBgn0001133.1;Dir=sensecoverage=100.0;identity=99.6;matches=1640;mismatches=7;indels=0;unknowns=0;locus=RLOC_00015141
Chr2	stalkie_big_nohaplotig	exon	16836391	16836600	100	-	.	Parent=FBgn0001133.1.mrna1;Target=FBgn0001133.1 1438 1647 +
Chr2	stalkie_big_nohaplotig	exon	16836694	16837069	99	-	.	Parent=FBgn0001133.1.mrna1;Target=FBgn0001133.1 1062 1437 +
Chr2	stalkie_big_nohaplotig	exon	16837136	16837345	100	-	.	Parent=FBgn0001133.1.mrna1;Target=FBgn0001133.1 852 1061 +
Chr2	stalkie_big_nohaplotig	exon	16837415	16837754	99	-	.	Parent=FBgn0001133.1.mrna1;Target=FBgn0001133.1 512 851 +
Chr2	stalkie_big_nohaplotig	exon	16837814	16838180	99	-	.	Parent=FBgn0001133.1.mrna1;Target=FBgn0001133.1 145 511 +
Chr2	stalkie_big_nohaplotig	exon	16838252	16838395	97	-	.	Parent=FBgn0001133.1.mrna1;Target=FBgn0001133.1 1 144 +
Chr2	stalkie_big_nohaplotig	CDS	16836391	16836600	.	-	0	Parent=FBgn0001133.1.mrna1;Target=FBgn0001133.1 1438 1647 +
Chr2	stalkie_big_nohaplotig	CDS	16836694	16837069	.	-	1	Parent=FBgn0001133.1.mrna1;Target=FBgn0001133.1 1062 1437 +
Chr2	stalkie_big_nohaplotig	CDS	16837136	16837345	.	-	1	Parent=FBgn0001133.1.mrna1;Target=FBgn0001133.1 852 1061 +
Chr2	stalkie_big_nohaplotig	CDS	16837415	16837754	.	-	2	Parent=FBgn0001133.1.mrna1;Target=FBgn0001133.1 512 851 +
Chr2	stalkie_big_nohaplotig	CDS	16837814	16838180	.	-	0	Parent=FBgn0001133.1.mrna1;Target=FBgn0001133.1 145 511 +
Chr2	stalkie_big_nohaplotig	CDS	16838252	16838395	.	-	0	Parent=FBgn0001133.1.mrna1;Target=FBgn0001133.1 1 144 +
Chr2	gffcl	locus	16839719	16843065	.	+	.	ID=RLOC_00015142;geneIDs=FBgn0035264.path1;transcripts=FBgn0035264.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16839719	16843065	.	+	.	ID=FBgn0035264.mrna1;geneID=FBgn0035264.path1;Name=FBgn0035264;Dir=sensecoverage=100.0;identity=98.8;matches=1865;mismatches=21;indels=1;unknowns=0;locus=RLOC_00015142
Chr2	stalkie_big_nohaplotig	exon	16839719	16839766	100	+	.	Parent=FBgn0035264.mrna1;Target=FBgn0035264 1 48 +
Chr2	stalkie_big_nohaplotig	exon	16839833	16839944	99	+	.	Parent=FBgn0035264.mrna1;Target=FBgn0035264 49 160 +
Chr2	stalkie_big_nohaplotig	exon	16840001	16840288	98	+	.	Parent=FBgn0035264.mrna1;Target=FBgn0035264 161 448 +
Chr2	stalkie_big_nohaplotig	exon	16840347	16840492	97	+	.	Parent=FBgn0035264.mrna1;Target=FBgn0035264 449 594 +
Chr2	stalkie_big_nohaplotig	exon	16841369	16841528	100	+	.	Parent=FBgn0035264.mrna1;Target=FBgn0035264 595 754 +
Chr2	stalkie_big_nohaplotig	exon	16841585	16841955	99	+	.	Parent=FBgn0035264.mrna1;Target=FBgn0035264 755 1125 +
Chr2	stalkie_big_nohaplotig	exon	16842021	16842204	98	+	.	Parent=FBgn0035264.mrna1;Target=FBgn0035264 1126 1309 +
Chr2	stalkie_big_nohaplotig	exon	16842279	16842382	99	+	.	Parent=FBgn0035264.mrna1;Target=FBgn0035264 1310 1413 +
Chr2	stalkie_big_nohaplotig	exon	16842539	16842831	98	+	.	Parent=FBgn0035264.mrna1;Target=FBgn0035264 1414 1706 +
Chr2	stalkie_big_nohaplotig	exon	16842886	16843065	98	+	.	Parent=FBgn0035264.mrna1;Target=FBgn0035264 1707 1887 +
Chr2	stalkie_big_nohaplotig	CDS	16839719	16839766	.	+	0	Parent=FBgn0035264.mrna1;Target=FBgn0035264 1 48 +
Chr2	stalkie_big_nohaplotig	CDS	16839833	16839944	.	+	0	Parent=FBgn0035264.mrna1;Target=FBgn0035264 49 160 +
Chr2	stalkie_big_nohaplotig	CDS	16840001	16840288	.	+	2	Parent=FBgn0035264.mrna1;Target=FBgn0035264 161 448 +
Chr2	stalkie_big_nohaplotig	CDS	16840347	16840492	.	+	2	Parent=FBgn0035264.mrna1;Target=FBgn0035264 449 594 +
Chr2	stalkie_big_nohaplotig	CDS	16841369	16841528	.	+	0	Parent=FBgn0035264.mrna1;Target=FBgn0035264 595 754 +
Chr2	stalkie_big_nohaplotig	CDS	16841585	16841955	.	+	2	Parent=FBgn0035264.mrna1;Target=FBgn0035264 755 1125 +
Chr2	stalkie_big_nohaplotig	CDS	16842021	16842204	.	+	0	Parent=FBgn0035264.mrna1;Target=FBgn0035264 1126 1309 +
Chr2	stalkie_big_nohaplotig	CDS	16842279	16842382	.	+	2	Parent=FBgn0035264.mrna1;Target=FBgn0035264 1310 1413 +
Chr2	stalkie_big_nohaplotig	CDS	16842539	16842831	.	+	0	Parent=FBgn0035264.mrna1;Target=FBgn0035264 1414 1706 +
Chr2	stalkie_big_nohaplotig	CDS	16842886	16843065	.	+	1	Parent=FBgn0035264.mrna1;Target=FBgn0035264 1707 1887 +
Chr2	gffcl	locus	16845961	16849615	.	+	.	ID=RLOC_00015143;geneIDs=FBgn0034572.1.path1;transcripts=FBgn0034572.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16845961	16849615	.	+	.	ID=FBgn0034572.1.mrna1;geneID=FBgn0034572.1.path1;Name=FBgn0034572.1;Dir=sensecoverage=100.0;identity=98.6;matches=2885;mismatches=16;indels=25;unknowns=0;locus=RLOC_00015143
Chr2	stalkie_big_nohaplotig	exon	16845961	16846069	79	+	.	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 1 120 +
Chr2	stalkie_big_nohaplotig	exon	16846128	16846247	100	+	.	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 121 240 +
Chr2	stalkie_big_nohaplotig	exon	16846319	16846412	100	+	.	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 241 334 +
Chr2	stalkie_big_nohaplotig	exon	16846475	16846667	98	+	.	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 335 527 +
Chr2	stalkie_big_nohaplotig	exon	16846720	16846891	100	+	.	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 528 699 +
Chr2	stalkie_big_nohaplotig	exon	16846941	16847330	99	+	.	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 700 1089 +
Chr2	stalkie_big_nohaplotig	exon	16847387	16847430	97	+	.	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 1090 1133 +
Chr2	stalkie_big_nohaplotig	exon	16847487	16847819	100	+	.	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 1134 1466 +
Chr2	stalkie_big_nohaplotig	exon	16847874	16848116	98	+	.	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 1467 1709 +
Chr2	stalkie_big_nohaplotig	exon	16848170	16848353	100	+	.	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 1710 1893 +
Chr2	stalkie_big_nohaplotig	exon	16848410	16848653	99	+	.	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 1894 2137 +
Chr2	stalkie_big_nohaplotig	exon	16848717	16849105	98	+	.	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 2138 2526 +
Chr2	stalkie_big_nohaplotig	exon	16849161	16849456	99	+	.	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 2527 2822 +
Chr2	stalkie_big_nohaplotig	exon	16849519	16849615	100	+	.	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 2823 2919 +
Chr2	stalkie_big_nohaplotig	CDS	16846064	16846069	.	+	0	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 115 120 +
Chr2	stalkie_big_nohaplotig	CDS	16846128	16846247	.	+	0	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 121 240 +
Chr2	stalkie_big_nohaplotig	CDS	16846319	16846412	.	+	0	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 241 334 +
Chr2	stalkie_big_nohaplotig	CDS	16846475	16846667	.	+	2	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 335 527 +
Chr2	stalkie_big_nohaplotig	CDS	16846720	16846891	.	+	1	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 528 699 +
Chr2	stalkie_big_nohaplotig	CDS	16846941	16847330	.	+	0	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 700 1089 +
Chr2	stalkie_big_nohaplotig	CDS	16847387	16847430	.	+	0	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 1090 1133 +
Chr2	stalkie_big_nohaplotig	CDS	16847487	16847819	.	+	1	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 1134 1466 +
Chr2	stalkie_big_nohaplotig	CDS	16847874	16848116	.	+	1	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 1467 1709 +
Chr2	stalkie_big_nohaplotig	CDS	16848170	16848353	.	+	1	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 1710 1893 +
Chr2	stalkie_big_nohaplotig	CDS	16848410	16848653	.	+	0	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 1894 2137 +
Chr2	stalkie_big_nohaplotig	CDS	16848717	16849105	.	+	2	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 2138 2526 +
Chr2	stalkie_big_nohaplotig	CDS	16849161	16849456	.	+	0	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 2527 2822 +
Chr2	stalkie_big_nohaplotig	CDS	16849519	16849615	.	+	1	Parent=FBgn0034572.1.mrna1;Target=FBgn0034572.1 2823 2919 +
Chr2	gffcl	locus	16849889	16851002	.	-	.	ID=RLOC_00015144;geneIDs=FBgn0051232.1.path1;transcripts=FBgn0051232.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16849889	16851002	.	-	.	ID=FBgn0051232.1.mrna1;geneID=FBgn0051232.1.path1;Name=FBgn0051232.1;Dir=sensecoverage=100.0;identity=99.9;matches=830;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015144
Chr2	stalkie_big_nohaplotig	exon	16849889	16849981	100	-	.	Parent=FBgn0051232.1.mrna1;Target=FBgn0051232.1 739 831 +
Chr2	stalkie_big_nohaplotig	exon	16850037	16850270	99	-	.	Parent=FBgn0051232.1.mrna1;Target=FBgn0051232.1 505 738 +
Chr2	stalkie_big_nohaplotig	exon	16850330	16850548	100	-	.	Parent=FBgn0051232.1.mrna1;Target=FBgn0051232.1 286 504 +
Chr2	stalkie_big_nohaplotig	exon	16850658	16850802	100	-	.	Parent=FBgn0051232.1.mrna1;Target=FBgn0051232.1 141 285 +
Chr2	stalkie_big_nohaplotig	exon	16850863	16851002	100	-	.	Parent=FBgn0051232.1.mrna1;Target=FBgn0051232.1 1 140 +
Chr2	stalkie_big_nohaplotig	CDS	16849889	16849981	.	-	0	Parent=FBgn0051232.1.mrna1;Target=FBgn0051232.1 739 831 +
Chr2	stalkie_big_nohaplotig	CDS	16850037	16850270	.	-	0	Parent=FBgn0051232.1.mrna1;Target=FBgn0051232.1 505 738 +
Chr2	stalkie_big_nohaplotig	CDS	16850330	16850548	.	-	0	Parent=FBgn0051232.1.mrna1;Target=FBgn0051232.1 286 504 +
Chr2	stalkie_big_nohaplotig	CDS	16850658	16850802	.	-	1	Parent=FBgn0051232.1.mrna1;Target=FBgn0051232.1 141 285 +
Chr2	stalkie_big_nohaplotig	CDS	16850863	16851002	.	-	0	Parent=FBgn0051232.1.mrna1;Target=FBgn0051232.1 1 140 +
Chr2	gffcl	locus	16855698	16868142	.	+	.	ID=RLOC_00015145;geneIDs=FBgn0050296.1.path1;transcripts=FBgn0050296.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16855698	16868142	.	+	.	ID=FBgn0050296.1.mrna1;geneID=FBgn0050296.1.path1;Name=FBgn0050296.1;Dir=sensecoverage=99.9;identity=99.7;matches=1278;mismatches=3;indels=1;unknowns=0;Target=FBgn0050296.1 3 116 +;locus=RLOC_00015145
Chr2	stalkie_big_nohaplotig	exon	16855698	16855844	98	+	.	Parent=FBgn0050296.1.mrna1;Target=FBgn0050296.1 1 148 +
Chr2	stalkie_big_nohaplotig	exon	16856001	16856111	100	+	.	Parent=FBgn0050296.1.mrna1;Target=FBgn0050296.1 149 259 +
Chr2	stalkie_big_nohaplotig	exon	16858043	16858197	100	+	.	Parent=FBgn0050296.1.mrna1;Target=FBgn0050296.1 260 414 +
Chr2	stalkie_big_nohaplotig	exon	16861498	16861635	100	+	.	Parent=FBgn0050296.1.mrna1;Target=FBgn0050296.1 415 552 +
Chr2	stalkie_big_nohaplotig	exon	16862544	16862660	100	+	.	Parent=FBgn0050296.1.mrna1;Target=FBgn0050296.1 553 669 +
Chr2	stalkie_big_nohaplotig	exon	16866330	16866418	100	+	.	Parent=FBgn0050296.1.mrna1;Target=FBgn0050296.1 677 765 +
Chr2	stalkie_big_nohaplotig	exon	16866772	16866990	99	+	.	Parent=FBgn0050296.1.mrna1;Target=FBgn0050296.1 766 984 +
Chr2	stalkie_big_nohaplotig	exon	16867086	16867178	100	+	.	Parent=FBgn0050296.1.mrna1;Target=FBgn0050296.1 985 1077 +
Chr2	stalkie_big_nohaplotig	exon	16867782	16867934	100	+	.	Parent=FBgn0050296.1.mrna1;Target=FBgn0050296.1 1078 1230 +
Chr2	stalkie_big_nohaplotig	exon	16868084	16868142	100	+	.	Parent=FBgn0050296.1.mrna1;Target=FBgn0050296.1 1231 1289 +
Chr2	stalkie_big_nohaplotig	CDS	16855700	16855812	.	+	0	Parent=FBgn0050296.1.mrna1
Chr2	gffcl	locus	16864242	16865048	.	+	.	ID=RLOC_00015146;geneIDs=comp153509_c1_seq1.path1;transcripts=comp153509_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16864242	16865048	.	+	.	ID=comp153509_c1_seq1.mrna1;geneID=comp153509_c1_seq1.path1;Name=comp153509_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=785;mismatches=14;indels=8;unknowns=0;Target=comp153509_c1_seq1 799 1 .;CDS_Target=comp153509_c1_seq1 525 385 .;locus=RLOC_00015146
Chr2	stalkie_big_nohaplotig	exon	16864242	16865048	97	+	.	Parent=comp153509_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16864626	16864766	.	+	0	Parent=comp153509_c1_seq1.mrna1
Chr2	gffcl	locus	16870198	16870840	.	+	.	ID=RLOC_00015147;geneIDs=FBgn0034576.1.path1;transcripts=FBgn0034576.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16870198	16870840	.	+	.	ID=FBgn0034576.1.mrna1;geneID=FBgn0034576.1.path1;Name=FBgn0034576.1;Dir=sensecoverage=99.1;identity=98.1;matches=513;mismatches=10;indels=0;unknowns=0;locus=RLOC_00015147
Chr2	stalkie_big_nohaplotig	exon	16870198	16870464	98	+	.	Parent=FBgn0034576.1.mrna1;Target=FBgn0034576.1 6 272 +
Chr2	stalkie_big_nohaplotig	exon	16870524	16870618	96	+	.	Parent=FBgn0034576.1.mrna1;Target=FBgn0034576.1 273 367 +
Chr2	stalkie_big_nohaplotig	exon	16870680	16870840	98	+	.	Parent=FBgn0034576.1.mrna1;Target=FBgn0034576.1 368 528 +
Chr2	stalkie_big_nohaplotig	CDS	16870199	16870464	.	+	0	Parent=FBgn0034576.1.mrna1;Target=FBgn0034576.1 7 272 +
Chr2	stalkie_big_nohaplotig	CDS	16870524	16870618	.	+	1	Parent=FBgn0034576.1.mrna1;Target=FBgn0034576.1 273 367 +
Chr2	stalkie_big_nohaplotig	CDS	16870680	16870840	.	+	2	Parent=FBgn0034576.1.mrna1;Target=FBgn0034576.1 368 528 +
Chr2	gffcl	locus	16906385	16907025	.	-	.	ID=RLOC_00015148;geneIDs=comp149554_c0_seq1.path1;transcripts=comp149554_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16906385	16907025	.	-	.	ID=comp149554_c0_seq1.mrna1;geneID=comp149554_c0_seq1.path1;Name=comp149554_c0_seq1;Dir=indeterminatecoverage=95.2;identity=95.6;matches=632;mismatches=9;indels=20;unknowns=0;Target=comp149554_c0_seq1 688 28 .;CDS_Target=comp149554_c0_seq1 393 355 .;locus=RLOC_00015148
Chr2	stalkie_big_nohaplotig	exon	16906385	16907025	95	-	.	Parent=comp149554_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16906673	16906698	.	-	0	Parent=comp149554_c0_seq1.mrna1
Chr2	gffcl	locus	16907217	16909538	.	-	.	ID=RLOC_00015149;geneIDs=FBgn0085486.1.path1;transcripts=FBgn0085486.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16907217	16909538	.	-	.	ID=FBgn0085486.1.mrna1;geneID=FBgn0085486.1.path1;Name=FBgn0085486.1;Dir=sensecoverage=100.0;identity=99.2;matches=1051;mismatches=8;indels=0;unknowns=0;locus=RLOC_00015149
Chr2	stalkie_big_nohaplotig	exon	16907217	16907318	98	-	.	Parent=FBgn0085486.1.mrna1;Target=FBgn0085486.1 958 1059 +
Chr2	stalkie_big_nohaplotig	exon	16907440	16907526	100	-	.	Parent=FBgn0085486.1.mrna1;Target=FBgn0085486.1 871 957 +
Chr2	stalkie_big_nohaplotig	exon	16907587	16907688	99	-	.	Parent=FBgn0085486.1.mrna1;Target=FBgn0085486.1 769 870 +
Chr2	stalkie_big_nohaplotig	exon	16907774	16908283	99	-	.	Parent=FBgn0085486.1.mrna1;Target=FBgn0085486.1 259 768 +
Chr2	stalkie_big_nohaplotig	exon	16908345	16908433	100	-	.	Parent=FBgn0085486.1.mrna1;Target=FBgn0085486.1 170 258 +
Chr2	stalkie_big_nohaplotig	exon	16909370	16909538	99	-	.	Parent=FBgn0085486.1.mrna1;Target=FBgn0085486.1 1 169 +
Chr2	stalkie_big_nohaplotig	CDS	16907217	16907318	.	-	0	Parent=FBgn0085486.1.mrna1;Target=FBgn0085486.1 958 1059 +
Chr2	stalkie_big_nohaplotig	CDS	16907440	16907526	.	-	0	Parent=FBgn0085486.1.mrna1;Target=FBgn0085486.1 871 957 +
Chr2	stalkie_big_nohaplotig	CDS	16907587	16907688	.	-	0	Parent=FBgn0085486.1.mrna1;Target=FBgn0085486.1 769 870 +
Chr2	stalkie_big_nohaplotig	CDS	16907774	16908283	.	-	0	Parent=FBgn0085486.1.mrna1;Target=FBgn0085486.1 259 768 +
Chr2	stalkie_big_nohaplotig	CDS	16908345	16908433	.	-	2	Parent=FBgn0085486.1.mrna1;Target=FBgn0085486.1 170 258 +
Chr2	stalkie_big_nohaplotig	CDS	16909370	16909538	.	-	0	Parent=FBgn0085486.1.mrna1;Target=FBgn0085486.1 1 169 +
Chr2	gffcl	locus	16950510	17521099	.	-	.	ID=RLOC_00015151;geneIDs=comp150311_c0_seq1.path1;transcripts=comp150311_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16950510	17521099	.	-	.	ID=comp150311_c0_seq1.mrna1;geneID=comp150311_c0_seq1.path1;Name=comp150311_c0_seq1;Dir=indeterminatecoverage=51.8;identity=100.0;matches=654;mismatches=0;indels=0;unknowns=0;Target=comp150311_c0_seq1 67 8 .;locus=RLOC_00015151
Chr2	stalkie_big_nohaplotig	exon	16950510	16950514	100	-	.	Parent=comp150311_c0_seq1.mrna1;Target=comp150311_c0_seq1 660 656 .
Chr2	stalkie_big_nohaplotig	exon	16953766	16953773	100	-	.	Parent=comp150311_c0_seq1.mrna1;Target=comp150311_c0_seq1 655 648 .
Chr2	stalkie_big_nohaplotig	exon	16953882	16953883	100	-	.	Parent=comp150311_c0_seq1.mrna1;Target=comp150311_c0_seq1 647 646 .
Chr2	stalkie_big_nohaplotig	exon	16956222	16956228	100	-	.	Parent=comp150311_c0_seq1.mrna1;Target=comp150311_c0_seq1 645 639 .
Chr2	stalkie_big_nohaplotig	exon	16971364	16971369	100	-	.	Parent=comp150311_c0_seq1.mrna1;Target=comp150311_c0_seq1 637 632 .
Chr2	stalkie_big_nohaplotig	exon	16975788	16975793	100	-	.	Parent=comp150311_c0_seq1.mrna1;Target=comp150311_c0_seq1 631 626 .
Chr2	stalkie_big_nohaplotig	exon	17520481	17521099	100	-	.	Parent=comp150311_c0_seq1.mrna1;Target=comp150311_c0_seq1 625 7 .
Chr2	stalkie_big_nohaplotig	CDS	17521039	17521098	.	-	0	Parent=comp150311_c0_seq1.mrna1
Chr2	gffcl	locus	16955053	16955992	.	+	.	ID=RLOC_00015152;geneIDs=FBgn0004832.1.path1;transcripts=FBgn0004832.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16955053	16955992	.	+	.	ID=FBgn0004832.1.mrna1;geneID=FBgn0004832.1.path1;Name=FBgn0004832.1;Dir=sensecoverage=100.0;identity=99.9;matches=809;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015152
Chr2	stalkie_big_nohaplotig	exon	16955053	16955180	100	+	.	Parent=FBgn0004832.1.mrna1;Target=FBgn0004832.1 1 128 +
Chr2	stalkie_big_nohaplotig	exon	16955255	16955637	99	+	.	Parent=FBgn0004832.1.mrna1;Target=FBgn0004832.1 129 511 +
Chr2	stalkie_big_nohaplotig	exon	16955694	16955992	100	+	.	Parent=FBgn0004832.1.mrna1;Target=FBgn0004832.1 512 810 +
Chr2	stalkie_big_nohaplotig	CDS	16955053	16955180	.	+	0	Parent=FBgn0004832.1.mrna1;Target=FBgn0004832.1 1 128 +
Chr2	stalkie_big_nohaplotig	CDS	16955255	16955637	.	+	1	Parent=FBgn0004832.1.mrna1;Target=FBgn0004832.1 129 511 +
Chr2	stalkie_big_nohaplotig	CDS	16955694	16955992	.	+	2	Parent=FBgn0004832.1.mrna1;Target=FBgn0004832.1 512 810 +
Chr2	gffcl	locus	16957885	16959240	.	+	.	ID=RLOC_00015153;geneIDs=FBgn0034577.1.path1;transcripts=FBgn0034577.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16957885	16959240	.	+	.	ID=FBgn0034577.1.mrna1;geneID=FBgn0034577.1.path1;Name=FBgn0034577.1;Dir=sensecoverage=100.0;identity=99.9;matches=875;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015153
Chr2	stalkie_big_nohaplotig	exon	16957885	16958143	100	+	.	Parent=FBgn0034577.1.mrna1;Target=FBgn0034577.1 1 259 +
Chr2	stalkie_big_nohaplotig	exon	16958477	16958646	100	+	.	Parent=FBgn0034577.1.mrna1;Target=FBgn0034577.1 260 429 +
Chr2	stalkie_big_nohaplotig	exon	16958711	16958884	99	+	.	Parent=FBgn0034577.1.mrna1;Target=FBgn0034577.1 430 603 +
Chr2	stalkie_big_nohaplotig	exon	16958968	16959240	100	+	.	Parent=FBgn0034577.1.mrna1;Target=FBgn0034577.1 604 876 +
Chr2	stalkie_big_nohaplotig	CDS	16957885	16958143	.	+	0	Parent=FBgn0034577.1.mrna1;Target=FBgn0034577.1 1 259 +
Chr2	stalkie_big_nohaplotig	CDS	16958477	16958646	.	+	2	Parent=FBgn0034577.1.mrna1;Target=FBgn0034577.1 260 429 +
Chr2	stalkie_big_nohaplotig	CDS	16958711	16958884	.	+	0	Parent=FBgn0034577.1.mrna1;Target=FBgn0034577.1 430 603 +
Chr2	stalkie_big_nohaplotig	CDS	16958968	16959240	.	+	0	Parent=FBgn0034577.1.mrna1;Target=FBgn0034577.1 604 876 +
Chr2	gffcl	locus	16960027	16960668	.	-	.	ID=RLOC_00015154;geneIDs=FBgn0051913.1.path1;transcripts=FBgn0051913.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16960027	16960668	.	-	.	ID=FBgn0051913.1.mrna1;geneID=FBgn0051913.1.path1;Name=FBgn0051913.1;Dir=sensecoverage=100.0;identity=98.9;matches=445;mismatches=4;indels=1;unknowns=0;locus=RLOC_00015154
Chr2	stalkie_big_nohaplotig	exon	16960027	16960141	99	-	.	Parent=FBgn0051913.1.mrna1;Target=FBgn0051913.1 335 450 +
Chr2	stalkie_big_nohaplotig	exon	16960275	16960397	98	-	.	Parent=FBgn0051913.1.mrna1;Target=FBgn0051913.1 212 334 +
Chr2	stalkie_big_nohaplotig	exon	16960458	16960668	99	-	.	Parent=FBgn0051913.1.mrna1;Target=FBgn0051913.1 1 211 +
Chr2	stalkie_big_nohaplotig	CDS	16960027	16960141	.	-	2	Parent=FBgn0051913.1.mrna1;Target=FBgn0051913.1 335 450 +
Chr2	stalkie_big_nohaplotig	CDS	16960275	16960397	.	-	2	Parent=FBgn0051913.1.mrna1;Target=FBgn0051913.1 212 334 +
Chr2	stalkie_big_nohaplotig	CDS	16960458	16960668	.	-	0	Parent=FBgn0051913.1.mrna1;Target=FBgn0051913.1 1 211 +
Chr2	gffcl	locus	16961006	16961538	.	+	.	ID=RLOC_00015155;geneIDs=FBgn0034579.1.path1;transcripts=FBgn0034579.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16961006	16961538	.	+	.	ID=FBgn0034579.1.mrna1;geneID=FBgn0034579.1.path1;Name=FBgn0034579.1;Dir=sensecoverage=100.0;identity=99.5;matches=409;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015155
Chr2	stalkie_big_nohaplotig	exon	16961006	16961114	100	+	.	Parent=FBgn0034579.1.mrna1;Target=FBgn0034579.1 1 109 +
Chr2	stalkie_big_nohaplotig	exon	16961179	16961321	99	+	.	Parent=FBgn0034579.1.mrna1;Target=FBgn0034579.1 110 252 +
Chr2	stalkie_big_nohaplotig	exon	16961380	16961538	99	+	.	Parent=FBgn0034579.1.mrna1;Target=FBgn0034579.1 253 411 +
Chr2	stalkie_big_nohaplotig	CDS	16961006	16961114	.	+	0	Parent=FBgn0034579.1.mrna1;Target=FBgn0034579.1 1 109 +
Chr2	stalkie_big_nohaplotig	CDS	16961179	16961321	.	+	2	Parent=FBgn0034579.1.mrna1;Target=FBgn0034579.1 110 252 +
Chr2	stalkie_big_nohaplotig	CDS	16961380	16961538	.	+	0	Parent=FBgn0034579.1.mrna1;Target=FBgn0034579.1 253 411 +
Chr2	gffcl	locus	16962784	16967001	.	+	.	ID=RLOC_00015156;geneIDs=FBgn0034580.1.path1;transcripts=FBgn0034580.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16962784	16967001	.	+	.	ID=FBgn0034580.1.mrna1;geneID=FBgn0034580.1.path1;Name=FBgn0034580.1;Dir=sensecoverage=100.0;identity=99.9;matches=1493;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015156
Chr2	stalkie_big_nohaplotig	exon	16962784	16962886	100	+	.	Parent=FBgn0034580.1.mrna1;Target=FBgn0034580.1 1 103 +
Chr2	stalkie_big_nohaplotig	exon	16964208	16964667	99	+	.	Parent=FBgn0034580.1.mrna1;Target=FBgn0034580.1 104 563 +
Chr2	stalkie_big_nohaplotig	exon	16965959	16966206	100	+	.	Parent=FBgn0034580.1.mrna1;Target=FBgn0034580.1 564 811 +
Chr2	stalkie_big_nohaplotig	exon	16966319	16967001	100	+	.	Parent=FBgn0034580.1.mrna1;Target=FBgn0034580.1 812 1494 +
Chr2	stalkie_big_nohaplotig	CDS	16962784	16962886	.	+	0	Parent=FBgn0034580.1.mrna1;Target=FBgn0034580.1 1 103 +
Chr2	stalkie_big_nohaplotig	CDS	16964208	16964667	.	+	2	Parent=FBgn0034580.1.mrna1;Target=FBgn0034580.1 104 563 +
Chr2	stalkie_big_nohaplotig	CDS	16965959	16966206	.	+	1	Parent=FBgn0034580.1.mrna1;Target=FBgn0034580.1 564 811 +
Chr2	stalkie_big_nohaplotig	CDS	16966319	16967001	.	+	2	Parent=FBgn0034580.1.mrna1;Target=FBgn0034580.1 812 1494 +
Chr2	gffcl	locus	16976554	16979042	.	-	.	ID=RLOC_00015157;geneIDs=FBgn0022700.1.path1;transcripts=FBgn0022700.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16976554	16979042	.	-	.	ID=FBgn0022700.1.mrna1;geneID=FBgn0022700.1.path1;Name=FBgn0022700.1;Dir=sensecoverage=100.0;identity=99.9;matches=1418;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015157
Chr2	stalkie_big_nohaplotig	exon	16976554	16977221	100	-	.	Parent=FBgn0022700.1.mrna1;Target=FBgn0022700.1 752 1419 +
Chr2	stalkie_big_nohaplotig	exon	16977287	16977510	100	-	.	Parent=FBgn0022700.1.mrna1;Target=FBgn0022700.1 528 751 +
Chr2	stalkie_big_nohaplotig	exon	16978394	16978664	99	-	.	Parent=FBgn0022700.1.mrna1;Target=FBgn0022700.1 257 527 +
Chr2	stalkie_big_nohaplotig	exon	16978724	16978894	100	-	.	Parent=FBgn0022700.1.mrna1;Target=FBgn0022700.1 86 256 +
Chr2	stalkie_big_nohaplotig	exon	16978958	16979042	100	-	.	Parent=FBgn0022700.1.mrna1;Target=FBgn0022700.1 1 85 +
Chr2	stalkie_big_nohaplotig	CDS	16976554	16977221	.	-	2	Parent=FBgn0022700.1.mrna1;Target=FBgn0022700.1 752 1419 +
Chr2	stalkie_big_nohaplotig	CDS	16977287	16977510	.	-	1	Parent=FBgn0022700.1.mrna1;Target=FBgn0022700.1 528 751 +
Chr2	stalkie_big_nohaplotig	CDS	16978394	16978664	.	-	2	Parent=FBgn0022700.1.mrna1;Target=FBgn0022700.1 257 527 +
Chr2	stalkie_big_nohaplotig	CDS	16978724	16978894	.	-	2	Parent=FBgn0022700.1.mrna1;Target=FBgn0022700.1 86 256 +
Chr2	stalkie_big_nohaplotig	CDS	16978958	16979042	.	-	0	Parent=FBgn0022700.1.mrna1;Target=FBgn0022700.1 1 85 +
Chr2	gffcl	locus	16980324	16981050	.	+	.	ID=RLOC_00015158;geneIDs=comp116464_c0_seq1.path1;transcripts=comp116464_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16980324	16981050	.	+	.	ID=comp116464_c0_seq1.mrna1;geneID=comp116464_c0_seq1.path1;Name=comp116464_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=727;mismatches=0;indels=0;unknowns=0;Target=comp116464_c0_seq1 727 1 .;CDS_Target=comp116464_c0_seq1 417 313 .;locus=RLOC_00015158
Chr2	stalkie_big_nohaplotig	exon	16980324	16981050	100	+	.	Parent=comp116464_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16980636	16980740	.	+	0	Parent=comp116464_c0_seq1.mrna1
Chr2	gffcl	locus	16981337	16983836	.	.	.	ID=RLOC_00015159;geneIDs=FBgn0034611.1.path1,comp142418_c0_seq1.path1;transcripts=FBgn0034611.1.mrna1,comp142418_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16981337	16983836	.	-	.	ID=FBgn0034611.1.mrna1;geneID=FBgn0034611.1.path1;Name=FBgn0034611.1;Dir=sensecoverage=100.0;identity=99.9;matches=1513;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015159
Chr2	stalkie_big_nohaplotig	exon	16981337	16981500	100	-	.	Parent=FBgn0034611.1.mrna1;Target=FBgn0034611.1 1352 1515 +
Chr2	stalkie_big_nohaplotig	exon	16981581	16981782	99	-	.	Parent=FBgn0034611.1.mrna1;Target=FBgn0034611.1 1150 1351 +
Chr2	stalkie_big_nohaplotig	exon	16981838	16981986	100	-	.	Parent=FBgn0034611.1.mrna1;Target=FBgn0034611.1 1001 1149 +
Chr2	stalkie_big_nohaplotig	exon	16982666	16982834	100	-	.	Parent=FBgn0034611.1.mrna1;Target=FBgn0034611.1 832 1000 +
Chr2	stalkie_big_nohaplotig	exon	16982897	16983438	99	-	.	Parent=FBgn0034611.1.mrna1;Target=FBgn0034611.1 290 831 +
Chr2	stalkie_big_nohaplotig	exon	16983496	16983638	100	-	.	Parent=FBgn0034611.1.mrna1;Target=FBgn0034611.1 147 289 +
Chr2	stalkie_big_nohaplotig	exon	16983691	16983836	100	-	.	Parent=FBgn0034611.1.mrna1;Target=FBgn0034611.1 1 146 +
Chr2	stalkie_big_nohaplotig	CDS	16981337	16981500	.	-	2	Parent=FBgn0034611.1.mrna1;Target=FBgn0034611.1 1352 1515 +
Chr2	stalkie_big_nohaplotig	CDS	16981581	16981782	.	-	0	Parent=FBgn0034611.1.mrna1;Target=FBgn0034611.1 1150 1351 +
Chr2	stalkie_big_nohaplotig	CDS	16981838	16981986	.	-	2	Parent=FBgn0034611.1.mrna1;Target=FBgn0034611.1 1001 1149 +
Chr2	stalkie_big_nohaplotig	CDS	16982666	16982834	.	-	0	Parent=FBgn0034611.1.mrna1;Target=FBgn0034611.1 832 1000 +
Chr2	stalkie_big_nohaplotig	CDS	16982897	16983438	.	-	2	Parent=FBgn0034611.1.mrna1;Target=FBgn0034611.1 290 831 +
Chr2	stalkie_big_nohaplotig	CDS	16983496	16983638	.	-	1	Parent=FBgn0034611.1.mrna1;Target=FBgn0034611.1 147 289 +
Chr2	stalkie_big_nohaplotig	CDS	16983691	16983836	.	-	0	Parent=FBgn0034611.1.mrna1;Target=FBgn0034611.1 1 146 +
Chr2	stalkie_big_nohaplotig	mRNA	16981964	16982623	.	+	.	ID=comp142418_c0_seq1.mrna1;geneID=comp142418_c0_seq1.path1;Name=comp142418_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=659;mismatches=1;indels=0;unknowns=0;Target=comp142418_c0_seq1 660 1 .;CDS_Target=comp142418_c0_seq1 541 449 .;locus=RLOC_00015159
Chr2	stalkie_big_nohaplotig	exon	16981964	16982623	99	+	.	Parent=comp142418_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	16982412	16982504	.	+	0	Parent=comp142418_c0_seq1.mrna1
Chr2	gffcl	locus	16983848	16989456	.	-	.	ID=RLOC_00015160;geneIDs=comp143665_c0_seq1.path1;transcripts=comp143665_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16983848	16989456	.	-	.	ID=comp143665_c0_seq1.mrna1;geneID=comp143665_c0_seq1.path1;Name=comp143665_c0_seq1;Dir=sensecoverage=100.0;identity=97.8;matches=742;mismatches=13;indels=4;unknowns=0;Target=comp143665_c0_seq1 313 444 +;locus=RLOC_00015160
Chr2	stalkie_big_nohaplotig	exon	16983848	16983869	100	-	.	Parent=comp143665_c0_seq1.mrna1;Target=comp143665_c0_seq1 734 755 +
Chr2	stalkie_big_nohaplotig	exon	16988720	16989456	97	-	.	Parent=comp143665_c0_seq1.mrna1;Target=comp143665_c0_seq1 1 733 +
Chr2	stalkie_big_nohaplotig	CDS	16989009	16989140	.	-	0	Parent=comp143665_c0_seq1.mrna1
Chr2	gffcl	locus	16985808	16987526	.	+	.	ID=RLOC_00015161;geneIDs=FBgn0000054.1.path1;transcripts=FBgn0000054.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16985808	16987526	.	+	.	ID=FBgn0000054.1.mrna1;geneID=FBgn0000054.1.path1;Name=FBgn0000054.1;Dir=sensecoverage=100.0;identity=100.0;matches=792;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015161
Chr2	stalkie_big_nohaplotig	exon	16985808	16985985	100	+	.	Parent=FBgn0000054.1.mrna1;Target=FBgn0000054.1 1 178 +
Chr2	stalkie_big_nohaplotig	exon	16986708	16986828	100	+	.	Parent=FBgn0000054.1.mrna1;Target=FBgn0000054.1 179 299 +
Chr2	stalkie_big_nohaplotig	exon	16986890	16987083	100	+	.	Parent=FBgn0000054.1.mrna1;Target=FBgn0000054.1 300 493 +
Chr2	stalkie_big_nohaplotig	exon	16987228	16987526	100	+	.	Parent=FBgn0000054.1.mrna1;Target=FBgn0000054.1 494 792 +
Chr2	stalkie_big_nohaplotig	CDS	16985808	16985985	.	+	0	Parent=FBgn0000054.1.mrna1;Target=FBgn0000054.1 1 178 +
Chr2	stalkie_big_nohaplotig	CDS	16986708	16986828	.	+	2	Parent=FBgn0000054.1.mrna1;Target=FBgn0000054.1 179 299 +
Chr2	stalkie_big_nohaplotig	CDS	16986890	16987083	.	+	1	Parent=FBgn0000054.1.mrna1;Target=FBgn0000054.1 300 493 +
Chr2	stalkie_big_nohaplotig	CDS	16987228	16987526	.	+	2	Parent=FBgn0000054.1.mrna1;Target=FBgn0000054.1 494 792 +
Chr2	gffcl	locus	16987644	16988070	.	+	.	ID=RLOC_00015162;geneIDs=comp118816_c0_seq1.path1;transcripts=comp118816_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16987644	16988070	.	+	.	ID=comp118816_c0_seq1.mrna1;geneID=comp118816_c0_seq1.path1;Name=comp118816_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=321;mismatches=0;indels=0;unknowns=0;Target=comp118816_c0_seq1 224 307 +;locus=RLOC_00015162
Chr2	stalkie_big_nohaplotig	exon	16987644	16987667	100	+	.	Parent=comp118816_c0_seq1.mrna1;Target=comp118816_c0_seq1 1 24 +
Chr2	stalkie_big_nohaplotig	exon	16987774	16988070	100	+	.	Parent=comp118816_c0_seq1.mrna1;Target=comp118816_c0_seq1 25 321 +
Chr2	stalkie_big_nohaplotig	CDS	16987973	16988056	.	+	0	Parent=comp118816_c0_seq1.mrna1
Chr2	gffcl	locus	16989709	16990316	.	+	.	ID=RLOC_00015163;geneIDs=FBgn0033089.1.path1;transcripts=FBgn0033089.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16989709	16990316	.	+	.	ID=FBgn0033089.1.mrna1;geneID=FBgn0033089.1.path1;Name=FBgn0033089.1;Dir=sensecoverage=100.0;identity=98.9;matches=549;mismatches=6;indels=0;unknowns=0;locus=RLOC_00015163
Chr2	stalkie_big_nohaplotig	exon	16989709	16989975	98	+	.	Parent=FBgn0033089.1.mrna1;Target=FBgn0033089.1 1 267 +
Chr2	stalkie_big_nohaplotig	exon	16990029	16990316	99	+	.	Parent=FBgn0033089.1.mrna1;Target=FBgn0033089.1 268 555 +
Chr2	stalkie_big_nohaplotig	CDS	16989709	16989975	.	+	0	Parent=FBgn0033089.1.mrna1;Target=FBgn0033089.1 1 267 +
Chr2	stalkie_big_nohaplotig	CDS	16990029	16990316	.	+	0	Parent=FBgn0033089.1.mrna1;Target=FBgn0033089.1 268 555 +
Chr2	gffcl	locus	16990417	16991780	.	-	.	ID=RLOC_00015164;geneIDs=FBgn0033088.1.path1;transcripts=FBgn0033088.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16990417	16991780	.	-	.	ID=FBgn0033088.1.mrna1;geneID=FBgn0033088.1.path1;Name=FBgn0033088.1;Dir=sensecoverage=100.0;identity=99.0;matches=996;mismatches=9;indels=1;unknowns=0;locus=RLOC_00015164
Chr2	stalkie_big_nohaplotig	exon	16990417	16990465	97	-	.	Parent=FBgn0033088.1.mrna1;Target=FBgn0033088.1 957 1005 +
Chr2	stalkie_big_nohaplotig	exon	16990526	16990730	99	-	.	Parent=FBgn0033088.1.mrna1;Target=FBgn0033088.1 752 956 +
Chr2	stalkie_big_nohaplotig	exon	16990796	16990932	100	-	.	Parent=FBgn0033088.1.mrna1;Target=FBgn0033088.1 615 751 +
Chr2	stalkie_big_nohaplotig	exon	16990997	16991121	98	-	.	Parent=FBgn0033088.1.mrna1;Target=FBgn0033088.1 490 614 +
Chr2	stalkie_big_nohaplotig	exon	16991176	16991328	98	-	.	Parent=FBgn0033088.1.mrna1;Target=FBgn0033088.1 337 489 +
Chr2	stalkie_big_nohaplotig	exon	16991384	16991547	100	-	.	Parent=FBgn0033088.1.mrna1;Target=FBgn0033088.1 173 336 +
Chr2	stalkie_big_nohaplotig	exon	16991608	16991780	98	-	.	Parent=FBgn0033088.1.mrna1;Target=FBgn0033088.1 1 172 +
Chr2	stalkie_big_nohaplotig	CDS	16990417	16990465	.	-	1	Parent=FBgn0033088.1.mrna1;Target=FBgn0033088.1 957 1005 +
Chr2	stalkie_big_nohaplotig	CDS	16990526	16990730	.	-	2	Parent=FBgn0033088.1.mrna1;Target=FBgn0033088.1 752 956 +
Chr2	stalkie_big_nohaplotig	CDS	16990796	16990932	.	-	1	Parent=FBgn0033088.1.mrna1;Target=FBgn0033088.1 615 751 +
Chr2	stalkie_big_nohaplotig	CDS	16990997	16991121	.	-	0	Parent=FBgn0033088.1.mrna1;Target=FBgn0033088.1 490 614 +
Chr2	stalkie_big_nohaplotig	CDS	16991176	16991328	.	-	0	Parent=FBgn0033088.1.mrna1;Target=FBgn0033088.1 337 489 +
Chr2	stalkie_big_nohaplotig	CDS	16991384	16991547	.	-	2	Parent=FBgn0033088.1.mrna1;Target=FBgn0033088.1 173 336 +
Chr2	stalkie_big_nohaplotig	CDS	16991608	16991752	.	-	0	Parent=FBgn0033088.1.mrna1;Target=FBgn0033088.1 28 172 +
Chr2	gffcl	locus	16996651	17103485	.	-	.	ID=RLOC_00015166;geneIDs=FBgn0010504.1.path1,FBgn0034985.1.path1,comp150028_c0_seq1.path1;transcripts=comp150028_c0_seq1.mrna1,FBgn0010504.1.mrna1,FBgn0034985.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16996651	17103485	.	-	.	ID=comp150028_c0_seq1.mrna1;geneID=comp150028_c0_seq1.path1;Name=comp150028_c0_seq1;Dir=sensecoverage=60.6;identity=98.8;matches=513;mismatches=6;indels=0;unknowns=0;Target=comp150028_c0_seq1 485 583 +;locus=RLOC_00015166
Chr2	stalkie_big_nohaplotig	exon	16996651	16997093	99	-	.	Parent=comp150028_c0_seq1.mrna1;Target=comp150028_c0_seq1 176 618 +
Chr2	stalkie_big_nohaplotig	exon	17026608	17026609	100	-	.	Parent=comp150028_c0_seq1.mrna1;Target=comp150028_c0_seq1 174 175 +
Chr2	stalkie_big_nohaplotig	exon	17040827	17040831	100	-	.	Parent=comp150028_c0_seq1.mrna1;Target=comp150028_c0_seq1 169 173 +
Chr2	stalkie_big_nohaplotig	exon	17047953	17047963	90	-	.	Parent=comp150028_c0_seq1.mrna1;Target=comp150028_c0_seq1 158 168 +
Chr2	stalkie_big_nohaplotig	exon	17050397	17050398	100	-	.	Parent=comp150028_c0_seq1.mrna1;Target=comp150028_c0_seq1 156 157 +
Chr2	stalkie_big_nohaplotig	exon	17056902	17056904	100	-	.	Parent=comp150028_c0_seq1.mrna1;Target=comp150028_c0_seq1 153 155 +
Chr2	stalkie_big_nohaplotig	exon	17063775	17063777	100	-	.	Parent=comp150028_c0_seq1.mrna1;Target=comp150028_c0_seq1 150 152 +
Chr2	stalkie_big_nohaplotig	exon	17077277	17077278	100	-	.	Parent=comp150028_c0_seq1.mrna1;Target=comp150028_c0_seq1 148 149 +
Chr2	stalkie_big_nohaplotig	exon	17080999	17081006	100	-	.	Parent=comp150028_c0_seq1.mrna1;Target=comp150028_c0_seq1 140 147 +
Chr2	stalkie_big_nohaplotig	exon	17082815	17082816	100	-	.	Parent=comp150028_c0_seq1.mrna1;Target=comp150028_c0_seq1 138 139 +
Chr2	stalkie_big_nohaplotig	exon	17090766	17090773	100	-	.	Parent=comp150028_c0_seq1.mrna1;Target=comp150028_c0_seq1 130 137 +
Chr2	stalkie_big_nohaplotig	exon	17091201	17091214	92	-	.	Parent=comp150028_c0_seq1.mrna1;Target=comp150028_c0_seq1 116 129 +
Chr2	stalkie_big_nohaplotig	exon	17091335	17091338	100	-	.	Parent=comp150028_c0_seq1.mrna1;Target=comp150028_c0_seq1 112 115 +
Chr2	stalkie_big_nohaplotig	exon	17101011	17101015	100	-	.	Parent=comp150028_c0_seq1.mrna1;Target=comp150028_c0_seq1 107 111 +
Chr2	stalkie_big_nohaplotig	exon	17103479	17103485	100	-	.	Parent=comp150028_c0_seq1.mrna1;Target=comp150028_c0_seq1 100 106 +
Chr2	stalkie_big_nohaplotig	CDS	16996686	16996784	.	-	0	Parent=comp150028_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17047305	17048297	.	-	.	ID=FBgn0010504.1.mrna1;geneID=FBgn0010504.1.path1;Name=FBgn0010504.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=993;mismatches=0;indels=0;unknowns=0;Target=FBgn0010504.1 993 1 .;locus=RLOC_00015166
Chr2	stalkie_big_nohaplotig	exon	17047305	17048297	100	-	.	Parent=FBgn0010504.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17047305	17048297	.	-	0	Parent=FBgn0010504.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17074329	17079169	.	-	.	ID=FBgn0034985.1.mrna1;geneID=FBgn0034985.1.path1;Name=FBgn0034985.1;Dir=sensecoverage=100.0;identity=99.3;matches=4005;mismatches=27;indels=0;unknowns=0;locus=RLOC_00015166
Chr2	stalkie_big_nohaplotig	exon	17074329	17074406	100	-	.	Parent=FBgn0034985.1.mrna1;Target=FBgn0034985.1 3955 4032 +
Chr2	stalkie_big_nohaplotig	exon	17074477	17074690	97	-	.	Parent=FBgn0034985.1.mrna1;Target=FBgn0034985.1 3741 3954 +
Chr2	stalkie_big_nohaplotig	exon	17074754	17075352	99	-	.	Parent=FBgn0034985.1.mrna1;Target=FBgn0034985.1 3142 3740 +
Chr2	stalkie_big_nohaplotig	exon	17075679	17076984	99	-	.	Parent=FBgn0034985.1.mrna1;Target=FBgn0034985.1 1836 3141 +
Chr2	stalkie_big_nohaplotig	exon	17077195	17077439	99	-	.	Parent=FBgn0034985.1.mrna1;Target=FBgn0034985.1 1591 1835 +
Chr2	stalkie_big_nohaplotig	exon	17077500	17078145	99	-	.	Parent=FBgn0034985.1.mrna1;Target=FBgn0034985.1 945 1590 +
Chr2	stalkie_big_nohaplotig	exon	17078226	17079169	99	-	.	Parent=FBgn0034985.1.mrna1;Target=FBgn0034985.1 1 944 +
Chr2	stalkie_big_nohaplotig	CDS	17074329	17074406	.	-	0	Parent=FBgn0034985.1.mrna1;Target=FBgn0034985.1 3955 4032 +
Chr2	stalkie_big_nohaplotig	CDS	17074477	17074690	.	-	1	Parent=FBgn0034985.1.mrna1;Target=FBgn0034985.1 3741 3954 +
Chr2	stalkie_big_nohaplotig	CDS	17074754	17075352	.	-	0	Parent=FBgn0034985.1.mrna1;Target=FBgn0034985.1 3142 3740 +
Chr2	stalkie_big_nohaplotig	CDS	17075679	17076984	.	-	1	Parent=FBgn0034985.1.mrna1;Target=FBgn0034985.1 1836 3141 +
Chr2	stalkie_big_nohaplotig	CDS	17077195	17077439	.	-	0	Parent=FBgn0034985.1.mrna1;Target=FBgn0034985.1 1591 1835 +
Chr2	stalkie_big_nohaplotig	CDS	17077500	17078145	.	-	1	Parent=FBgn0034985.1.mrna1;Target=FBgn0034985.1 945 1590 +
Chr2	stalkie_big_nohaplotig	CDS	17078226	17079169	.	-	0	Parent=FBgn0034985.1.mrna1;Target=FBgn0034985.1 1 944 +
Chr2	gffcl	locus	16998234	16999114	.	-	.	ID=RLOC_00015167;geneIDs=FBgn0033086.1.path1;transcripts=FBgn0033086.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	16998234	16999114	.	-	.	ID=FBgn0033086.1.mrna1;geneID=FBgn0033086.1.path1;Name=FBgn0033086.1;Dir=sensecoverage=100.0;identity=99.7;matches=631;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015167
Chr2	stalkie_big_nohaplotig	exon	16998234	16998684	99	-	.	Parent=FBgn0033086.1.mrna1;Target=FBgn0033086.1 183 633 +
Chr2	stalkie_big_nohaplotig	exon	16998750	16998854	99	-	.	Parent=FBgn0033086.1.mrna1;Target=FBgn0033086.1 78 182 +
Chr2	stalkie_big_nohaplotig	exon	16999038	16999114	100	-	.	Parent=FBgn0033086.1.mrna1;Target=FBgn0033086.1 1 77 +
Chr2	stalkie_big_nohaplotig	CDS	16998234	16998684	.	-	1	Parent=FBgn0033086.1.mrna1;Target=FBgn0033086.1 183 633 +
Chr2	stalkie_big_nohaplotig	CDS	16998750	16998854	.	-	1	Parent=FBgn0033086.1.mrna1;Target=FBgn0033086.1 78 182 +
Chr2	stalkie_big_nohaplotig	CDS	16999038	16999114	.	-	0	Parent=FBgn0033086.1.mrna1;Target=FBgn0033086.1 1 77 +
Chr2	gffcl	locus	17000032	17002140	.	+	.	ID=RLOC_00015168;geneIDs=FBgn0036142.1.path1;transcripts=FBgn0036142.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17000032	17002140	.	+	.	ID=FBgn0036142.1.mrna1;geneID=FBgn0036142.1.path1;Name=FBgn0036142.1;Dir=sensecoverage=100.0;identity=99.4;matches=1709;mismatches=10;indels=0;unknowns=0;locus=RLOC_00015168
Chr2	stalkie_big_nohaplotig	exon	17000032	17000554	99	+	.	Parent=FBgn0036142.1.mrna1;Target=FBgn0036142.1 1 523 +
Chr2	stalkie_big_nohaplotig	exon	17000629	17000777	98	+	.	Parent=FBgn0036142.1.mrna1;Target=FBgn0036142.1 524 672 +
Chr2	stalkie_big_nohaplotig	exon	17000845	17001090	98	+	.	Parent=FBgn0036142.1.mrna1;Target=FBgn0036142.1 673 918 +
Chr2	stalkie_big_nohaplotig	exon	17001155	17001320	100	+	.	Parent=FBgn0036142.1.mrna1;Target=FBgn0036142.1 919 1084 +
Chr2	stalkie_big_nohaplotig	exon	17001381	17001732	100	+	.	Parent=FBgn0036142.1.mrna1;Target=FBgn0036142.1 1085 1436 +
Chr2	stalkie_big_nohaplotig	exon	17001796	17001960	99	+	.	Parent=FBgn0036142.1.mrna1;Target=FBgn0036142.1 1437 1601 +
Chr2	stalkie_big_nohaplotig	exon	17002023	17002140	100	+	.	Parent=FBgn0036142.1.mrna1;Target=FBgn0036142.1 1602 1719 +
Chr2	stalkie_big_nohaplotig	CDS	17000032	17000554	.	+	0	Parent=FBgn0036142.1.mrna1;Target=FBgn0036142.1 1 523 +
Chr2	stalkie_big_nohaplotig	CDS	17000629	17000777	.	+	2	Parent=FBgn0036142.1.mrna1;Target=FBgn0036142.1 524 672 +
Chr2	stalkie_big_nohaplotig	CDS	17000845	17001090	.	+	0	Parent=FBgn0036142.1.mrna1;Target=FBgn0036142.1 673 918 +
Chr2	stalkie_big_nohaplotig	CDS	17001155	17001320	.	+	0	Parent=FBgn0036142.1.mrna1;Target=FBgn0036142.1 919 1084 +
Chr2	stalkie_big_nohaplotig	CDS	17001381	17001732	.	+	2	Parent=FBgn0036142.1.mrna1;Target=FBgn0036142.1 1085 1436 +
Chr2	stalkie_big_nohaplotig	CDS	17001796	17001960	.	+	1	Parent=FBgn0036142.1.mrna1;Target=FBgn0036142.1 1437 1601 +
Chr2	stalkie_big_nohaplotig	CDS	17002023	17002140	.	+	1	Parent=FBgn0036142.1.mrna1;Target=FBgn0036142.1 1602 1719 +
Chr2	gffcl	locus	17002224	17002767	.	-	.	ID=RLOC_00015169;geneIDs=FBgn0033085.1.path1;transcripts=FBgn0033085.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17002224	17002767	.	-	.	ID=FBgn0033085.1.mrna1;geneID=FBgn0033085.1.path1;Name=FBgn0033085.1;Dir=sensecoverage=100.0;identity=99.2;matches=476;mismatches=4;indels=0;unknowns=0;locus=RLOC_00015169
Chr2	stalkie_big_nohaplotig	exon	17002224	17002619	98	-	.	Parent=FBgn0033085.1.mrna1;Target=FBgn0033085.1 85 480 +
Chr2	stalkie_big_nohaplotig	exon	17002684	17002767	100	-	.	Parent=FBgn0033085.1.mrna1;Target=FBgn0033085.1 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	17002224	17002619	.	-	0	Parent=FBgn0033085.1.mrna1;Target=FBgn0033085.1 85 480 +
Chr2	stalkie_big_nohaplotig	CDS	17002684	17002767	.	-	0	Parent=FBgn0033085.1.mrna1;Target=FBgn0033085.1 1 84 +
Chr2	gffcl	locus	17008220	17009243	.	+	.	ID=RLOC_00015171;geneIDs=FBgn0005648.2.path1;transcripts=FBgn0005648.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17008220	17009243	.	+	.	ID=FBgn0005648.2.mrna1;geneID=FBgn0005648.2.path1;Name=FBgn0005648.2;Dir=sensecoverage=100.0;identity=100.0;matches=696;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015171
Chr2	stalkie_big_nohaplotig	exon	17008220	17008345	100	+	.	Parent=FBgn0005648.2.mrna1;Target=FBgn0005648.2 1 126 +
Chr2	stalkie_big_nohaplotig	exon	17008521	17008916	100	+	.	Parent=FBgn0005648.2.mrna1;Target=FBgn0005648.2 127 522 +
Chr2	stalkie_big_nohaplotig	exon	17008973	17009106	100	+	.	Parent=FBgn0005648.2.mrna1;Target=FBgn0005648.2 523 656 +
Chr2	stalkie_big_nohaplotig	exon	17009204	17009243	100	+	.	Parent=FBgn0005648.2.mrna1;Target=FBgn0005648.2 657 696 +
Chr2	stalkie_big_nohaplotig	CDS	17008220	17008345	.	+	0	Parent=FBgn0005648.2.mrna1;Target=FBgn0005648.2 1 126 +
Chr2	stalkie_big_nohaplotig	CDS	17008521	17008916	.	+	0	Parent=FBgn0005648.2.mrna1;Target=FBgn0005648.2 127 522 +
Chr2	stalkie_big_nohaplotig	CDS	17008973	17009106	.	+	0	Parent=FBgn0005648.2.mrna1;Target=FBgn0005648.2 523 656 +
Chr2	stalkie_big_nohaplotig	CDS	17009204	17009243	.	+	1	Parent=FBgn0005648.2.mrna1;Target=FBgn0005648.2 657 696 +
Chr2	gffcl	locus	17011146	17011794	.	+	.	ID=RLOC_00015172;geneIDs=comp62149_c0_seq1.path1;transcripts=comp62149_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17011146	17011794	.	+	.	ID=comp62149_c0_seq1.mrna1;geneID=comp62149_c0_seq1.path1;Name=comp62149_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=641;mismatches=8;indels=2;unknowns=0;Target=comp62149_c0_seq1 651 1 .;CDS_Target=comp62149_c0_seq1 247 89 .;locus=RLOC_00015172
Chr2	stalkie_big_nohaplotig	exon	17011146	17011794	98	+	.	Parent=comp62149_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17011234	17011390	.	+	0	Parent=comp62149_c0_seq1.mrna1
Chr2	gffcl	locus	17014372	17014960	.	-	.	ID=RLOC_00015173;geneIDs=comp146581_c0_seq1.path1;transcripts=comp146581_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17014372	17014960	.	-	.	ID=comp146581_c0_seq1.mrna1;geneID=comp146581_c0_seq1.path1;Name=comp146581_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.1;matches=555;mismatches=5;indels=0;unknowns=0;Target=comp146581_c0_seq1 459 256 .;locus=RLOC_00015173
Chr2	stalkie_big_nohaplotig	exon	17014372	17014857	98	-	.	Parent=comp146581_c0_seq1.mrna1;Target=comp146581_c0_seq1 580 95 .
Chr2	stalkie_big_nohaplotig	exon	17014887	17014960	100	-	.	Parent=comp146581_c0_seq1.mrna1;Target=comp146581_c0_seq1 75 2 .
Chr2	stalkie_big_nohaplotig	CDS	17014493	17014696	.	-	0	Parent=comp146581_c0_seq1.mrna1
Chr2	gffcl	locus	17015066	17015616	.	-	.	ID=RLOC_00015174;geneIDs=comp147848_c0_seq1.path1;transcripts=comp147848_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17015066	17015616	.	-	.	ID=comp147848_c0_seq1.mrna1;geneID=comp147848_c0_seq1.path1;Name=comp147848_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.6;matches=549;mismatches=2;indels=0;unknowns=0;Target=comp147848_c0_seq1 551 1 .;CDS_Target=comp147848_c0_seq1 395 237 .;locus=RLOC_00015174
Chr2	stalkie_big_nohaplotig	exon	17015066	17015616	99	-	.	Parent=comp147848_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17015222	17015380	.	-	0	Parent=comp147848_c0_seq1.mrna1
Chr2	gffcl	locus	17018757	17019684	.	+	.	ID=RLOC_00015175;geneIDs=comp143676_c0_seq1.path1;transcripts=comp143676_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17018757	17019684	.	+	.	ID=comp143676_c0_seq1.mrna1;geneID=comp143676_c0_seq1.path1;Name=comp143676_c0_seq1;Dir=indeterminatecoverage=98.0;identity=99.2;matches=921;mismatches=7;indels=0;unknowns=0;Target=comp143676_c0_seq1 928 1 .;CDS_Target=comp143676_c0_seq1 506 426 .;locus=RLOC_00015175
Chr2	stalkie_big_nohaplotig	exon	17018757	17019684	99	+	.	Parent=comp143676_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17019182	17019262	.	+	0	Parent=comp143676_c0_seq1.mrna1
Chr2	gffcl	locus	17024669	17034883	.	-	.	ID=RLOC_00015176;geneIDs=FBgn0263593.1.path1,comp162234_c2_seq1.path1;transcripts=comp162234_c2_seq1.mrna1,FBgn0263593.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17024669	17034883	.	-	.	ID=comp162234_c2_seq1.mrna1;geneID=comp162234_c2_seq1.path1;Name=comp162234_c2_seq1;Dir=antisensecoverage=69.9;identity=99.3;matches=4701;mismatches=33;indels=0;unknowns=0;locus=RLOC_00015176
Chr2	stalkie_big_nohaplotig	exon	17024669	17026227	98	-	.	Parent=comp162234_c2_seq1.mrna1;Target=comp162234_c2_seq1 12 1570 -
Chr2	stalkie_big_nohaplotig	exon	17029789	17029892	100	-	.	Parent=comp162234_c2_seq1.mrna1;Target=comp162234_c2_seq1 1571 1674 -
Chr2	stalkie_big_nohaplotig	exon	17029954	17030454	99	-	.	Parent=comp162234_c2_seq1.mrna1;Target=comp162234_c2_seq1 1675 2175 -
Chr2	stalkie_big_nohaplotig	exon	17030518	17030741	98	-	.	Parent=comp162234_c2_seq1.mrna1;Target=comp162234_c2_seq1 2176 2399 -
Chr2	stalkie_big_nohaplotig	exon	17030803	17031007	99	-	.	Parent=comp162234_c2_seq1.mrna1;Target=comp162234_c2_seq1 2400 2604 -
Chr2	stalkie_big_nohaplotig	exon	17031155	17031283	100	-	.	Parent=comp162234_c2_seq1.mrna1;Target=comp162234_c2_seq1 2605 2733 -
Chr2	stalkie_big_nohaplotig	exon	17031891	17031987	100	-	.	Parent=comp162234_c2_seq1.mrna1;Target=comp162234_c2_seq1 2734 2830 -
Chr2	stalkie_big_nohaplotig	exon	17032054	17033274	99	-	.	Parent=comp162234_c2_seq1.mrna1;Target=comp162234_c2_seq1 2831 4051 -
Chr2	stalkie_big_nohaplotig	exon	17033356	17033493	99	-	.	Parent=comp162234_c2_seq1.mrna1;Target=comp162234_c2_seq1 4052 4189 -
Chr2	stalkie_big_nohaplotig	exon	17033947	17034146	99	-	.	Parent=comp162234_c2_seq1.mrna1;Target=comp162234_c2_seq1 4190 4389 -
Chr2	stalkie_big_nohaplotig	exon	17034528	17034883	100	-	.	Parent=comp162234_c2_seq1.mrna1;Target=comp162234_c2_seq1 4390 4745 -
Chr2	stalkie_big_nohaplotig	CDS	17025954	17026227	.	-	1	Parent=comp162234_c2_seq1.mrna1;Target=comp162234_c2_seq1 1297 1570 .
Chr2	stalkie_big_nohaplotig	CDS	17029789	17029892	.	-	0	Parent=comp162234_c2_seq1.mrna1;Target=comp162234_c2_seq1 1571 1674 .
Chr2	stalkie_big_nohaplotig	CDS	17029954	17030454	.	-	0	Parent=comp162234_c2_seq1.mrna1;Target=comp162234_c2_seq1 1675 2175 .
Chr2	stalkie_big_nohaplotig	CDS	17030518	17030741	.	-	2	Parent=comp162234_c2_seq1.mrna1;Target=comp162234_c2_seq1 2176 2399 .
Chr2	stalkie_big_nohaplotig	CDS	17030803	17031007	.	-	0	Parent=comp162234_c2_seq1.mrna1;Target=comp162234_c2_seq1 2400 2604 .
Chr2	stalkie_big_nohaplotig	CDS	17031155	17031283	.	-	0	Parent=comp162234_c2_seq1.mrna1;Target=comp162234_c2_seq1 2605 2733 .
Chr2	stalkie_big_nohaplotig	CDS	17031891	17031987	.	-	1	Parent=comp162234_c2_seq1.mrna1;Target=comp162234_c2_seq1 2734 2830 .
Chr2	stalkie_big_nohaplotig	CDS	17032054	17033274	.	-	1	Parent=comp162234_c2_seq1.mrna1;Target=comp162234_c2_seq1 2831 4051 .
Chr2	stalkie_big_nohaplotig	CDS	17033356	17033493	.	-	1	Parent=comp162234_c2_seq1.mrna1;Target=comp162234_c2_seq1 4052 4189 .
Chr2	stalkie_big_nohaplotig	CDS	17033947	17034146	.	-	0	Parent=comp162234_c2_seq1.mrna1;Target=comp162234_c2_seq1 4190 4389 .
Chr2	stalkie_big_nohaplotig	CDS	17034528	17034707	.	-	0	Parent=comp162234_c2_seq1.mrna1;Target=comp162234_c2_seq1 4390 4569 .
Chr2	stalkie_big_nohaplotig	mRNA	17025813	17034737	.	-	.	ID=FBgn0263593.1.mrna1;geneID=FBgn0263593.1.path1;Name=FBgn0263593.1;Dir=sensecoverage=100.0;identity=99.5;matches=3331;mismatches=17;indels=0;unknowns=0;locus=RLOC_00015176
Chr2	stalkie_big_nohaplotig	exon	17025813	17025885	100	-	.	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 3276 3348 +
Chr2	stalkie_big_nohaplotig	exon	17025982	17026227	100	-	.	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 3030 3275 +
Chr2	stalkie_big_nohaplotig	exon	17029789	17029892	100	-	.	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 2926 3029 +
Chr2	stalkie_big_nohaplotig	exon	17029954	17030454	99	-	.	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 2425 2925 +
Chr2	stalkie_big_nohaplotig	exon	17030518	17030741	98	-	.	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 2201 2424 +
Chr2	stalkie_big_nohaplotig	exon	17030803	17031007	99	-	.	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 1996 2200 +
Chr2	stalkie_big_nohaplotig	exon	17031155	17031283	100	-	.	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 1867 1995 +
Chr2	stalkie_big_nohaplotig	exon	17031891	17031987	100	-	.	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 1770 1866 +
Chr2	stalkie_big_nohaplotig	exon	17032054	17033274	99	-	.	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 549 1769 +
Chr2	stalkie_big_nohaplotig	exon	17033356	17033493	99	-	.	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 411 548 +
Chr2	stalkie_big_nohaplotig	exon	17033947	17034146	99	-	.	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 211 410 +
Chr2	stalkie_big_nohaplotig	exon	17034528	17034737	100	-	.	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 1 210 +
Chr2	stalkie_big_nohaplotig	CDS	17025813	17025885	.	-	1	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 3276 3348 +
Chr2	stalkie_big_nohaplotig	CDS	17025982	17026227	.	-	1	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 3030 3275 +
Chr2	stalkie_big_nohaplotig	CDS	17029789	17029892	.	-	0	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 2926 3029 +
Chr2	stalkie_big_nohaplotig	CDS	17029954	17030454	.	-	0	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 2425 2925 +
Chr2	stalkie_big_nohaplotig	CDS	17030518	17030741	.	-	2	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 2201 2424 +
Chr2	stalkie_big_nohaplotig	CDS	17030803	17031007	.	-	0	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 1996 2200 +
Chr2	stalkie_big_nohaplotig	CDS	17031155	17031283	.	-	0	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 1867 1995 +
Chr2	stalkie_big_nohaplotig	CDS	17031891	17031987	.	-	1	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 1770 1866 +
Chr2	stalkie_big_nohaplotig	CDS	17032054	17033274	.	-	1	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 549 1769 +
Chr2	stalkie_big_nohaplotig	CDS	17033356	17033493	.	-	1	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 411 548 +
Chr2	stalkie_big_nohaplotig	CDS	17033947	17034146	.	-	0	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 211 410 +
Chr2	stalkie_big_nohaplotig	CDS	17034528	17034737	.	-	0	Parent=FBgn0263593.1.mrna1;Target=FBgn0263593.1 1 210 +
Chr2	gffcl	locus	17069604	17071195	.	-	.	ID=RLOC_00015177;geneIDs=FBgn0033272.1.path1;transcripts=FBgn0033272.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17069604	17071195	.	-	.	ID=FBgn0033272.1.mrna1;geneID=FBgn0033272.1.path1;Name=FBgn0033272.1;Dir=sensecoverage=99.3;identity=99.7;matches=1123;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015177
Chr2	stalkie_big_nohaplotig	exon	17069604	17069907	99	-	.	Parent=FBgn0033272.1.mrna1;Target=FBgn0033272.1 831 1134 +
Chr2	stalkie_big_nohaplotig	exon	17069963	17070105	100	-	.	Parent=FBgn0033272.1.mrna1;Target=FBgn0033272.1 688 830 +
Chr2	stalkie_big_nohaplotig	exon	17070171	17070389	99	-	.	Parent=FBgn0033272.1.mrna1;Target=FBgn0033272.1 469 687 +
Chr2	stalkie_big_nohaplotig	exon	17070736	17071195	99	-	.	Parent=FBgn0033272.1.mrna1;Target=FBgn0033272.1 9 468 +
Chr2	stalkie_big_nohaplotig	CDS	17069604	17069907	.	-	1	Parent=FBgn0033272.1.mrna1;Target=FBgn0033272.1 831 1134 +
Chr2	stalkie_big_nohaplotig	CDS	17069963	17070105	.	-	0	Parent=FBgn0033272.1.mrna1;Target=FBgn0033272.1 688 830 +
Chr2	stalkie_big_nohaplotig	CDS	17070171	17070389	.	-	0	Parent=FBgn0033272.1.mrna1;Target=FBgn0033272.1 469 687 +
Chr2	stalkie_big_nohaplotig	CDS	17070736	17071194	.	-	0	Parent=FBgn0033272.1.mrna1;Target=FBgn0033272.1 10 468 +
Chr2	gffcl	locus	17071832	17073141	.	+	.	ID=RLOC_00015178;geneIDs=FBgn0034986.1.path1;transcripts=FBgn0034986.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17071832	17073141	.	+	.	ID=FBgn0034986.1.mrna1;geneID=FBgn0034986.1.path1;Name=FBgn0034986.1;Dir=sensecoverage=100.0;identity=98.9;matches=463;mismatches=5;indels=0;unknowns=0;locus=RLOC_00015178
Chr2	stalkie_big_nohaplotig	exon	17071832	17071942	100	+	.	Parent=FBgn0034986.1.mrna1;Target=FBgn0034986.1 1 111 +
Chr2	stalkie_big_nohaplotig	exon	17071997	17072279	98	+	.	Parent=FBgn0034986.1.mrna1;Target=FBgn0034986.1 112 394 +
Chr2	stalkie_big_nohaplotig	exon	17073068	17073141	100	+	.	Parent=FBgn0034986.1.mrna1;Target=FBgn0034986.1 395 468 +
Chr2	stalkie_big_nohaplotig	CDS	17071832	17071942	.	+	0	Parent=FBgn0034986.1.mrna1;Target=FBgn0034986.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	17071997	17072279	.	+	0	Parent=FBgn0034986.1.mrna1;Target=FBgn0034986.1 112 394 +
Chr2	stalkie_big_nohaplotig	CDS	17073068	17073141	.	+	2	Parent=FBgn0034986.1.mrna1;Target=FBgn0034986.1 395 468 +
Chr2	gffcl	locus	17106736	17109347	.	-	.	ID=RLOC_00015179;geneIDs=FBgn0015544.1.path1;transcripts=FBgn0015544.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17106736	17109347	.	-	.	ID=FBgn0015544.1.mrna1;geneID=FBgn0015544.1.path1;Name=FBgn0015544.1;Dir=sensecoverage=100.0;identity=99.0;matches=1658;mismatches=16;indels=0;unknowns=0;locus=RLOC_00015179
Chr2	stalkie_big_nohaplotig	exon	17106736	17106827	98	-	.	Parent=FBgn0015544.1.mrna1;Target=FBgn0015544.1 1583 1674 +
Chr2	stalkie_big_nohaplotig	exon	17106896	17107091	98	-	.	Parent=FBgn0015544.1.mrna1;Target=FBgn0015544.1 1387 1582 +
Chr2	stalkie_big_nohaplotig	exon	17107151	17107240	100	-	.	Parent=FBgn0015544.1.mrna1;Target=FBgn0015544.1 1297 1386 +
Chr2	stalkie_big_nohaplotig	exon	17107294	17107739	99	-	.	Parent=FBgn0015544.1.mrna1;Target=FBgn0015544.1 851 1296 +
Chr2	stalkie_big_nohaplotig	exon	17107794	17108002	100	-	.	Parent=FBgn0015544.1.mrna1;Target=FBgn0015544.1 642 850 +
Chr2	stalkie_big_nohaplotig	exon	17108409	17108619	98	-	.	Parent=FBgn0015544.1.mrna1;Target=FBgn0015544.1 431 641 +
Chr2	stalkie_big_nohaplotig	exon	17108680	17108730	98	-	.	Parent=FBgn0015544.1.mrna1;Target=FBgn0015544.1 380 430 +
Chr2	stalkie_big_nohaplotig	exon	17108792	17108896	96	-	.	Parent=FBgn0015544.1.mrna1;Target=FBgn0015544.1 275 379 +
Chr2	stalkie_big_nohaplotig	exon	17109015	17109102	98	-	.	Parent=FBgn0015544.1.mrna1;Target=FBgn0015544.1 187 274 +
Chr2	stalkie_big_nohaplotig	exon	17109162	17109347	99	-	.	Parent=FBgn0015544.1.mrna1;Target=FBgn0015544.1 1 186 +
Chr2	stalkie_big_nohaplotig	CDS	17106736	17106827	.	-	2	Parent=FBgn0015544.1.mrna1;Target=FBgn0015544.1 1583 1674 +
Chr2	stalkie_big_nohaplotig	CDS	17106896	17107091	.	-	0	Parent=FBgn0015544.1.mrna1;Target=FBgn0015544.1 1387 1582 +
Chr2	stalkie_big_nohaplotig	CDS	17107151	17107240	.	-	0	Parent=FBgn0015544.1.mrna1;Target=FBgn0015544.1 1297 1386 +
Chr2	stalkie_big_nohaplotig	CDS	17107294	17107739	.	-	2	Parent=FBgn0015544.1.mrna1;Target=FBgn0015544.1 851 1296 +
Chr2	stalkie_big_nohaplotig	CDS	17107794	17108002	.	-	1	Parent=FBgn0015544.1.mrna1;Target=FBgn0015544.1 642 850 +
Chr2	stalkie_big_nohaplotig	CDS	17108409	17108619	.	-	2	Parent=FBgn0015544.1.mrna1;Target=FBgn0015544.1 431 641 +
Chr2	stalkie_big_nohaplotig	CDS	17108680	17108730	.	-	2	Parent=FBgn0015544.1.mrna1;Target=FBgn0015544.1 380 430 +
Chr2	stalkie_big_nohaplotig	CDS	17108792	17108896	.	-	2	Parent=FBgn0015544.1.mrna1;Target=FBgn0015544.1 275 379 +
Chr2	stalkie_big_nohaplotig	CDS	17109015	17109102	.	-	0	Parent=FBgn0015544.1.mrna1;Target=FBgn0015544.1 187 274 +
Chr2	stalkie_big_nohaplotig	CDS	17109162	17109347	.	-	0	Parent=FBgn0015544.1.mrna1;Target=FBgn0015544.1 1 186 +
Chr2	gffcl	locus	17111127	17113490	.	+	.	ID=RLOC_00015180;geneIDs=FBgn0260398.2.path1;transcripts=FBgn0260398.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17111127	17113490	.	+	.	ID=FBgn0260398.2.mrna1;geneID=FBgn0260398.2.path1;Name=FBgn0260398.2;Dir=sensecoverage=100.0;identity=98.3;matches=1215;mismatches=21;indels=0;unknowns=0;locus=RLOC_00015180
Chr2	stalkie_big_nohaplotig	exon	17111127	17111190	98	+	.	Parent=FBgn0260398.2.mrna1;Target=FBgn0260398.2 1 64 +
Chr2	stalkie_big_nohaplotig	exon	17112319	17113490	98	+	.	Parent=FBgn0260398.2.mrna1;Target=FBgn0260398.2 65 1236 +
Chr2	stalkie_big_nohaplotig	CDS	17111127	17111190	.	+	0	Parent=FBgn0260398.2.mrna1;Target=FBgn0260398.2 1 64 +
Chr2	stalkie_big_nohaplotig	CDS	17112319	17113490	.	+	2	Parent=FBgn0260398.2.mrna1;Target=FBgn0260398.2 65 1236 +
Chr2	gffcl	locus	17161949	17163041	.	+	.	ID=RLOC_00015181;geneIDs=FBgn0050429.1.path1;transcripts=FBgn0050429.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17161949	17163041	.	+	.	ID=FBgn0050429.1.mrna1;geneID=FBgn0050429.1.path1;Name=FBgn0050429.1;Dir=sensecoverage=100.0;identity=100.0;matches=900;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015181
Chr2	stalkie_big_nohaplotig	exon	17161949	17162414	100	+	.	Parent=FBgn0050429.1.mrna1;Target=FBgn0050429.1 1 466 +
Chr2	stalkie_big_nohaplotig	exon	17162483	17162667	100	+	.	Parent=FBgn0050429.1.mrna1;Target=FBgn0050429.1 467 651 +
Chr2	stalkie_big_nohaplotig	exon	17162728	17162814	100	+	.	Parent=FBgn0050429.1.mrna1;Target=FBgn0050429.1 652 738 +
Chr2	stalkie_big_nohaplotig	exon	17162880	17163041	100	+	.	Parent=FBgn0050429.1.mrna1;Target=FBgn0050429.1 739 900 +
Chr2	stalkie_big_nohaplotig	CDS	17161949	17162414	.	+	0	Parent=FBgn0050429.1.mrna1;Target=FBgn0050429.1 1 466 +
Chr2	stalkie_big_nohaplotig	CDS	17162483	17162667	.	+	2	Parent=FBgn0050429.1.mrna1;Target=FBgn0050429.1 467 651 +
Chr2	stalkie_big_nohaplotig	CDS	17162728	17162814	.	+	0	Parent=FBgn0050429.1.mrna1;Target=FBgn0050429.1 652 738 +
Chr2	stalkie_big_nohaplotig	CDS	17162880	17163041	.	+	0	Parent=FBgn0050429.1.mrna1;Target=FBgn0050429.1 739 900 +
Chr2	gffcl	locus	17163711	17163968	.	+	.	ID=RLOC_00015182;geneIDs=comp1044651_c0_seq1.path1;transcripts=comp1044651_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17163711	17163968	.	+	.	ID=comp1044651_c0_seq1.mrna1;geneID=comp1044651_c0_seq1.path1;Name=comp1044651_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=256;mismatches=2;indels=0;unknowns=0;Target=comp1044651_c0_seq1 258 1 .;CDS_Target=comp1044651_c0_seq1 117 1 .;locus=RLOC_00015182
Chr2	stalkie_big_nohaplotig	exon	17163711	17163968	99	+	.	Parent=comp1044651_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17163711	17163827	.	+	0	Parent=comp1044651_c0_seq1.mrna1
Chr2	gffcl	locus	17164252	17183248	.	-	.	ID=RLOC_00015183;geneIDs=FBgn0041585.1.path1,comp158846_c0_seq1.path1;transcripts=comp158846_c0_seq1.mrna1,FBgn0041585.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17164252	17183248	.	-	.	ID=comp158846_c0_seq1.mrna1;geneID=comp158846_c0_seq1.path1;Name=comp158846_c0_seq1;Dir=antisensecoverage=98.2;identity=99.9;matches=2084;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015183
Chr2	stalkie_big_nohaplotig	exon	17164252	17165396	99	-	.	Parent=comp158846_c0_seq1.mrna1;Target=comp158846_c0_seq1 39 1183 -
Chr2	stalkie_big_nohaplotig	exon	17169059	17169205	100	-	.	Parent=comp158846_c0_seq1.mrna1;Target=comp158846_c0_seq1 1184 1330 -
Chr2	stalkie_big_nohaplotig	exon	17182455	17183248	99	-	.	Parent=comp158846_c0_seq1.mrna1;Target=comp158846_c0_seq1 1331 2124 -
Chr2	stalkie_big_nohaplotig	CDS	17164863	17165396	.	-	0	Parent=comp158846_c0_seq1.mrna1;Target=comp158846_c0_seq1 650 1183 .
Chr2	stalkie_big_nohaplotig	CDS	17169059	17169205	.	-	0	Parent=comp158846_c0_seq1.mrna1;Target=comp158846_c0_seq1 1184 1330 .
Chr2	stalkie_big_nohaplotig	CDS	17182455	17182823	.	-	0	Parent=comp158846_c0_seq1.mrna1;Target=comp158846_c0_seq1 1331 1699 .
Chr2	stalkie_big_nohaplotig	mRNA	17164866	17169916	.	-	.	ID=FBgn0041585.1.mrna1;geneID=FBgn0041585.1.path1;Name=FBgn0041585.1;Dir=sensecoverage=100.0;identity=100.0;matches=1389;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015183
Chr2	stalkie_big_nohaplotig	exon	17164866	17165396	100	-	.	Parent=FBgn0041585.1.mrna1;Target=FBgn0041585.1 859 1389 +
Chr2	stalkie_big_nohaplotig	exon	17169059	17169916	100	-	.	Parent=FBgn0041585.1.mrna1;Target=FBgn0041585.1 1 858 +
Chr2	stalkie_big_nohaplotig	CDS	17164866	17165396	.	-	0	Parent=FBgn0041585.1.mrna1;Target=FBgn0041585.1 859 1389 +
Chr2	stalkie_big_nohaplotig	CDS	17169059	17169916	.	-	0	Parent=FBgn0041585.1.mrna1;Target=FBgn0041585.1 1 858 +
Chr2	gffcl	locus	17203612	17228510	.	-	.	ID=RLOC_00015184;geneIDs=FBgn0000157.1.path1;transcripts=FBgn0000157.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17203612	17228510	.	-	.	ID=FBgn0000157.1.mrna1;geneID=FBgn0000157.1.path1;Name=FBgn0000157.1;Dir=sensecoverage=56.6;identity=99.8;matches=602;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015184
Chr2	stalkie_big_nohaplotig	exon	17203612	17203805	100	-	.	Parent=FBgn0000157.1.mrna1;Target=FBgn0000157.1 410 603 +
Chr2	stalkie_big_nohaplotig	exon	17210307	17210482	99	-	.	Parent=FBgn0000157.1.mrna1;Target=FBgn0000157.1 234 409 +
Chr2	stalkie_big_nohaplotig	exon	17228278	17228510	100	-	.	Parent=FBgn0000157.1.mrna1;Target=FBgn0000157.1 1 233 +
Chr2	stalkie_big_nohaplotig	CDS	17203612	17203805	.	-	2	Parent=FBgn0000157.1.mrna1;Target=FBgn0000157.1 410 603 +
Chr2	stalkie_big_nohaplotig	CDS	17210307	17210482	.	-	1	Parent=FBgn0000157.1.mrna1;Target=FBgn0000157.1 234 409 +
Chr2	stalkie_big_nohaplotig	CDS	17228278	17228510	.	-	0	Parent=FBgn0000157.1.mrna1;Target=FBgn0000157.1 1 233 +
Chr2	gffcl	locus	17229234	17229804	.	+	.	ID=RLOC_00015185;geneIDs=comp87922_c0_seq1.path1;transcripts=comp87922_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17229234	17229804	.	+	.	ID=comp87922_c0_seq1.mrna1;geneID=comp87922_c0_seq1.path1;Name=comp87922_c0_seq1;Dir=indeterminatecoverage=95.5;identity=99.5;matches=568;mismatches=1;indels=2;unknowns=0;Target=comp87922_c0_seq1 569 1 .;CDS_Target=comp87922_c0_seq1 40 2 .;locus=RLOC_00015185
Chr2	stalkie_big_nohaplotig	exon	17229234	17229804	99	+	.	Parent=comp87922_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17229235	17229275	.	+	0	Parent=comp87922_c0_seq1.mrna1
Chr2	gffcl	locus	17235619	17242113	.	+	.	ID=RLOC_00015186;geneIDs=comp153692_c0_seq1.path1;transcripts=comp153692_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17235619	17242113	.	+	.	ID=comp153692_c0_seq1.mrna1;geneID=comp153692_c0_seq1.path1;Name=comp153692_c0_seq1;Dir=antisensecoverage=100.0;identity=99.2;matches=934;mismatches=7;indels=1;unknowns=0;Target=comp153692_c0_seq1 427 510 .;locus=RLOC_00015186
Chr2	stalkie_big_nohaplotig	exon	17235619	17235812	100	+	.	Parent=comp153692_c0_seq1.mrna1;Target=comp153692_c0_seq1 749 942 -
Chr2	stalkie_big_nohaplotig	exon	17241367	17242113	98	+	.	Parent=comp153692_c0_seq1.mrna1;Target=comp153692_c0_seq1 1 748 -
Chr2	stalkie_big_nohaplotig	CDS	17241605	17241687	.	+	0	Parent=comp153692_c0_seq1.mrna1
Chr2	gffcl	locus	17236912	17237189	.	-	.	ID=RLOC_00015187;geneIDs=comp149248_c0_seq1.path1;transcripts=comp149248_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17236912	17237189	.	-	.	ID=comp149248_c0_seq1.mrna1;geneID=comp149248_c0_seq1.path1;Name=comp149248_c0_seq1;Dir=indeterminatecoverage=85.4;identity=94.6;matches=265;mismatches=13;indels=2;unknowns=0;Target=comp149248_c0_seq1 280 1 .;CDS_Target=comp149248_c0_seq1 127 2 .;locus=RLOC_00015187
Chr2	stalkie_big_nohaplotig	exon	17236912	17237189	94	-	.	Parent=comp149248_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17237063	17237188	.	-	0	Parent=comp149248_c0_seq1.mrna1
Chr2	gffcl	locus	17239847	17241246	.	-	.	ID=RLOC_00015188;geneIDs=comp153365_c0_seq1.path1;transcripts=comp153365_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17239847	17241246	.	-	.	ID=comp153365_c0_seq1.mrna1;geneID=comp153365_c0_seq1.path1;Name=comp153365_c0_seq1;Dir=indeterminatecoverage=99.9;identity=94.7;matches=1346;mismatches=46;indels=29;unknowns=0;Target=comp153365_c0_seq1 1414 2 .;CDS_Target=comp153365_c0_seq1 569 354 .;locus=RLOC_00015188
Chr2	stalkie_big_nohaplotig	exon	17239847	17241246	94	-	.	Parent=comp153365_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17240679	17240894	.	-	0	Parent=comp153365_c0_seq1.mrna1
Chr2	gffcl	locus	17248141	17248815	.	+	.	ID=RLOC_00015189;geneIDs=comp113410_c0_seq1.path1;transcripts=comp113410_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17248141	17248815	.	+	.	ID=comp113410_c0_seq1.mrna1;geneID=comp113410_c0_seq1.path1;Name=comp113410_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=673;mismatches=2;indels=0;unknowns=0;Target=comp113410_c0_seq1 675 1 .;CDS_Target=comp113410_c0_seq1 225 100 .;locus=RLOC_00015189
Chr2	stalkie_big_nohaplotig	exon	17248141	17248815	99	+	.	Parent=comp113410_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17248240	17248365	.	+	0	Parent=comp113410_c0_seq1.mrna1
Chr2	gffcl	locus	17285798	17286229	.	+	.	ID=RLOC_00015190;geneIDs=comp120253_c0_seq1.path1;transcripts=comp120253_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17285798	17286229	.	+	.	ID=comp120253_c0_seq1.mrna1;geneID=comp120253_c0_seq1.path1;Name=comp120253_c0_seq1;Dir=indeterminatecoverage=96.2;identity=100.0;matches=432;mismatches=0;indels=0;unknowns=0;Target=comp120253_c0_seq1 442 11 .;CDS_Target=comp120253_c0_seq1 291 169 .;locus=RLOC_00015190
Chr2	stalkie_big_nohaplotig	exon	17285798	17286229	100	+	.	Parent=comp120253_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17285956	17286078	.	+	0	Parent=comp120253_c0_seq1.mrna1
Chr2	gffcl	locus	17301171	17301897	.	-	.	ID=RLOC_00015191;geneIDs=FBgn0028738.1.path1;transcripts=FBgn0028738.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17301171	17301897	.	-	.	ID=FBgn0028738.1.mrna1;geneID=FBgn0028738.1.path1;Name=FBgn0028738.1;Dir=sensecoverage=100.0;identity=99.7;matches=658;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015191
Chr2	stalkie_big_nohaplotig	exon	17301171	17301584	99	-	.	Parent=FBgn0028738.1.mrna1;Target=FBgn0028738.1 247 660 +
Chr2	stalkie_big_nohaplotig	exon	17301652	17301897	100	-	.	Parent=FBgn0028738.1.mrna1;Target=FBgn0028738.1 1 246 +
Chr2	stalkie_big_nohaplotig	CDS	17301171	17301584	.	-	0	Parent=FBgn0028738.1.mrna1;Target=FBgn0028738.1 247 660 +
Chr2	stalkie_big_nohaplotig	CDS	17301652	17301897	.	-	0	Parent=FBgn0028738.1.mrna1;Target=FBgn0028738.1 1 246 +
Chr2	gffcl	locus	17303807	17305342	.	-	.	ID=RLOC_00015192;geneIDs=FBgn0023181.1.path1;transcripts=FBgn0023181.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17303807	17305342	.	-	.	ID=FBgn0023181.1.mrna1;geneID=FBgn0023181.1.path1;Name=FBgn0023181.1;Dir=sensecoverage=100.0;identity=98.6;matches=1381;mismatches=20;indels=0;unknowns=0;locus=RLOC_00015192
Chr2	stalkie_big_nohaplotig	exon	17303807	17304575	98	-	.	Parent=FBgn0023181.1.mrna1;Target=FBgn0023181.1 633 1401 +
Chr2	stalkie_big_nohaplotig	exon	17304635	17305044	98	-	.	Parent=FBgn0023181.1.mrna1;Target=FBgn0023181.1 223 632 +
Chr2	stalkie_big_nohaplotig	exon	17305121	17305342	98	-	.	Parent=FBgn0023181.1.mrna1;Target=FBgn0023181.1 1 222 +
Chr2	stalkie_big_nohaplotig	CDS	17303807	17304575	.	-	1	Parent=FBgn0023181.1.mrna1;Target=FBgn0023181.1 633 1401 +
Chr2	stalkie_big_nohaplotig	CDS	17304635	17305044	.	-	0	Parent=FBgn0023181.1.mrna1;Target=FBgn0023181.1 223 632 +
Chr2	stalkie_big_nohaplotig	CDS	17305121	17305342	.	-	0	Parent=FBgn0023181.1.mrna1;Target=FBgn0023181.1 1 222 +
Chr2	gffcl	locus	17313437	17314263	.	+	.	ID=RLOC_00015193;geneIDs=comp144760_c0_seq1.path1;transcripts=comp144760_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17313437	17314263	.	+	.	ID=comp144760_c0_seq1.mrna1;geneID=comp144760_c0_seq1.path1;Name=comp144760_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=825;mismatches=2;indels=12;unknowns=0;Target=comp144760_c0_seq1 839 1 .;CDS_Target=comp144760_c0_seq1 244 134 .;locus=RLOC_00015193
Chr2	stalkie_big_nohaplotig	exon	17313437	17314263	98	+	.	Parent=comp144760_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17313558	17313668	.	+	0	Parent=comp144760_c0_seq1.mrna1
Chr2	gffcl	locus	17314684	17314833	.	+	.	ID=RLOC_00015194;geneIDs=FBgn0015801.1.path1;transcripts=FBgn0015801.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17314684	17314833	.	+	.	ID=FBgn0015801.1.mrna1;geneID=FBgn0015801.1.path1;Name=FBgn0015801.1;Dir=indeterminatecoverage=15.5;identity=100.0;matches=150;mismatches=0;indels=0;unknowns=0;Target=FBgn0015801.1 150 1 .;locus=RLOC_00015194
Chr2	stalkie_big_nohaplotig	exon	17314684	17314833	100	+	.	Parent=FBgn0015801.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17314684	17314833	.	+	0	Parent=FBgn0015801.1.mrna1
Chr2	gffcl	locus	17373232	17374533	.	-	.	ID=RLOC_00015195;geneIDs=FBgn0032513.1.path1;transcripts=FBgn0032513.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17373232	17374533	.	-	.	ID=FBgn0032513.1.mrna1;geneID=FBgn0032513.1.path1;Name=FBgn0032513.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1300;mismatches=2;indels=0;unknowns=0;Target=FBgn0032513.1 1302 1 .;locus=RLOC_00015195
Chr2	stalkie_big_nohaplotig	exon	17373232	17374533	99	-	.	Parent=FBgn0032513.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17373232	17374533	.	-	0	Parent=FBgn0032513.1.mrna1
Chr2	gffcl	locus	17385395	17385797	.	+	.	ID=RLOC_00015196;geneIDs=comp153615_c1_seq1.path9;transcripts=comp153615_c1_seq1.mrna9
Chr2	stalkie_big_nohaplotig	mRNA	17385395	17385797	.	+	.	ID=comp153615_c1_seq1.mrna9;geneID=comp153615_c1_seq1.path9;Name=comp153615_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=402;mismatches=1;indels=0;unknowns=0;Target=comp153615_c1_seq1 403 1 .;CDS_Target=comp153615_c1_seq1 96 1 .;locus=RLOC_00015196
Chr2	stalkie_big_nohaplotig	exon	17385395	17385797	99	+	.	Parent=comp153615_c1_seq1.mrna9
Chr2	stalkie_big_nohaplotig	CDS	17385395	17385490	.	+	0	Parent=comp153615_c1_seq1.mrna9
Chr2	gffcl	locus	17401158	17402250	.	-	.	ID=RLOC_00015198;geneIDs=FBgn0027610.5.path1;transcripts=FBgn0027610.5.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17401158	17402250	.	-	.	ID=FBgn0027610.5.mrna1;geneID=FBgn0027610.5.path1;Name=FBgn0027610.5;Dir=sensecoverage=100.0;identity=99.2;matches=876;mismatches=6;indels=1;unknowns=0;locus=RLOC_00015198
Chr2	stalkie_big_nohaplotig	exon	17401158	17401493	99	-	.	Parent=FBgn0027610.5.mrna1;Target=FBgn0027610.5 547 882 +
Chr2	stalkie_big_nohaplotig	exon	17401562	17401694	99	-	.	Parent=FBgn0027610.5.mrna1;Target=FBgn0027610.5 415 546 +
Chr2	stalkie_big_nohaplotig	exon	17401753	17401994	99	-	.	Parent=FBgn0027610.5.mrna1;Target=FBgn0027610.5 173 414 +
Chr2	stalkie_big_nohaplotig	exon	17402079	17402250	99	-	.	Parent=FBgn0027610.5.mrna1;Target=FBgn0027610.5 1 172 +
Chr2	stalkie_big_nohaplotig	CDS	17401158	17401493	.	-	2	Parent=FBgn0027610.5.mrna1;Target=FBgn0027610.5 547 882 +
Chr2	stalkie_big_nohaplotig	CDS	17401562	17401694	.	-	0	Parent=FBgn0027610.5.mrna1;Target=FBgn0027610.5 415 546 +
Chr2	stalkie_big_nohaplotig	CDS	17401753	17401994	.	-	2	Parent=FBgn0027610.5.mrna1;Target=FBgn0027610.5 173 414 +
Chr2	stalkie_big_nohaplotig	CDS	17402079	17402250	.	-	0	Parent=FBgn0027610.5.mrna1;Target=FBgn0027610.5 1 172 +
Chr2	gffcl	locus	17404905	17406009	.	-	.	ID=RLOC_00015199;geneIDs=FBgn0027610.3.path1;transcripts=FBgn0027610.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17404905	17406009	.	-	.	ID=FBgn0027610.3.mrna1;geneID=FBgn0027610.3.path1;Name=FBgn0027610.3;Dir=sensecoverage=100.0;identity=100.0;matches=894;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015199
Chr2	stalkie_big_nohaplotig	exon	17404905	17405225	100	-	.	Parent=FBgn0027610.3.mrna1;Target=FBgn0027610.3 574 894 +
Chr2	stalkie_big_nohaplotig	exon	17405303	17405435	100	-	.	Parent=FBgn0027610.3.mrna1;Target=FBgn0027610.3 441 573 +
Chr2	stalkie_big_nohaplotig	exon	17405499	17405736	100	-	.	Parent=FBgn0027610.3.mrna1;Target=FBgn0027610.3 203 440 +
Chr2	stalkie_big_nohaplotig	exon	17405808	17406009	100	-	.	Parent=FBgn0027610.3.mrna1;Target=FBgn0027610.3 1 202 +
Chr2	stalkie_big_nohaplotig	CDS	17404905	17405225	.	-	0	Parent=FBgn0027610.3.mrna1;Target=FBgn0027610.3 574 894 +
Chr2	stalkie_big_nohaplotig	CDS	17405303	17405435	.	-	1	Parent=FBgn0027610.3.mrna1;Target=FBgn0027610.3 441 573 +
Chr2	stalkie_big_nohaplotig	CDS	17405499	17405736	.	-	2	Parent=FBgn0027610.3.mrna1;Target=FBgn0027610.3 203 440 +
Chr2	stalkie_big_nohaplotig	CDS	17405808	17406009	.	-	0	Parent=FBgn0027610.3.mrna1;Target=FBgn0027610.3 1 202 +
Chr2	gffcl	locus	17418675	17419203	.	-	.	ID=RLOC_00015200;geneIDs=comp242139_c0_seq1.path1;transcripts=comp242139_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17418675	17419203	.	-	.	ID=comp242139_c0_seq1.mrna1;geneID=comp242139_c0_seq1.path1;Name=comp242139_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=529;mismatches=0;indels=0;unknowns=0;Target=comp242139_c0_seq1 529 1 .;CDS_Target=comp242139_c0_seq1 111 1 .;locus=RLOC_00015200
Chr2	stalkie_big_nohaplotig	exon	17418675	17419203	100	-	.	Parent=comp242139_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17419093	17419203	.	-	0	Parent=comp242139_c0_seq1.mrna1
Chr2	gffcl	locus	17426750	17427152	.	-	.	ID=RLOC_00015201;geneIDs=comp153615_c1_seq1.path4;transcripts=comp153615_c1_seq1.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	17426750	17427152	.	-	.	ID=comp153615_c1_seq1.mrna4;geneID=comp153615_c1_seq1.path4;Name=comp153615_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=403;mismatches=0;indels=0;unknowns=0;Target=comp153615_c1_seq1 403 1 .;CDS_Target=comp153615_c1_seq1 96 1 .;locus=RLOC_00015201
Chr2	stalkie_big_nohaplotig	exon	17426750	17427152	100	-	.	Parent=comp153615_c1_seq1.mrna4
Chr2	stalkie_big_nohaplotig	CDS	17427057	17427152	.	-	0	Parent=comp153615_c1_seq1.mrna4
Chr2	gffcl	locus	17502451	17507517	.	+	.	ID=RLOC_00015202;geneIDs=FBgn0033224.1.path1;transcripts=FBgn0033224.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17502451	17507517	.	+	.	ID=FBgn0033224.1.mrna1;geneID=FBgn0033224.1.path1;Name=FBgn0033224.1;Dir=sensecoverage=100.0;identity=100.0;matches=2775;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015202
Chr2	stalkie_big_nohaplotig	exon	17502451	17503017	100	+	.	Parent=FBgn0033224.1.mrna1;Target=FBgn0033224.1 1 567 +
Chr2	stalkie_big_nohaplotig	exon	17503072	17503783	100	+	.	Parent=FBgn0033224.1.mrna1;Target=FBgn0033224.1 568 1279 +
Chr2	stalkie_big_nohaplotig	exon	17503843	17505043	100	+	.	Parent=FBgn0033224.1.mrna1;Target=FBgn0033224.1 1280 2480 +
Chr2	stalkie_big_nohaplotig	exon	17505226	17505343	100	+	.	Parent=FBgn0033224.1.mrna1;Target=FBgn0033224.1 2481 2598 +
Chr2	stalkie_big_nohaplotig	exon	17507341	17507517	100	+	.	Parent=FBgn0033224.1.mrna1;Target=FBgn0033224.1 2599 2775 +
Chr2	stalkie_big_nohaplotig	CDS	17502451	17503017	.	+	0	Parent=FBgn0033224.1.mrna1;Target=FBgn0033224.1 1 567 +
Chr2	stalkie_big_nohaplotig	CDS	17503072	17503783	.	+	0	Parent=FBgn0033224.1.mrna1;Target=FBgn0033224.1 568 1279 +
Chr2	stalkie_big_nohaplotig	CDS	17503843	17505043	.	+	2	Parent=FBgn0033224.1.mrna1;Target=FBgn0033224.1 1280 2480 +
Chr2	stalkie_big_nohaplotig	CDS	17505226	17505343	.	+	1	Parent=FBgn0033224.1.mrna1;Target=FBgn0033224.1 2481 2598 +
Chr2	stalkie_big_nohaplotig	CDS	17507341	17507517	.	+	0	Parent=FBgn0033224.1.mrna1;Target=FBgn0033224.1 2599 2775 +
Chr2	gffcl	locus	17509525	17518036	.	-	.	ID=RLOC_00015203;geneIDs=FBgn0002891.1.path1;transcripts=FBgn0002891.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17509525	17518036	.	-	.	ID=FBgn0002891.1.mrna1;geneID=FBgn0002891.1.path1;Name=FBgn0002891.1;Dir=sensecoverage=100.0;identity=99.8;matches=5941;mismatches=4;indels=7;unknowns=0;locus=RLOC_00015203
Chr2	stalkie_big_nohaplotig	exon	17509525	17509553	96	-	.	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 5923 5952 +
Chr2	stalkie_big_nohaplotig	exon	17509617	17510187	100	-	.	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 5352 5922 +
Chr2	stalkie_big_nohaplotig	exon	17510242	17510460	100	-	.	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 5133 5351 +
Chr2	stalkie_big_nohaplotig	exon	17510514	17510707	100	-	.	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 4939 5132 +
Chr2	stalkie_big_nohaplotig	exon	17510762	17510902	100	-	.	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 4798 4938 +
Chr2	stalkie_big_nohaplotig	exon	17512365	17512838	100	-	.	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 4324 4797 +
Chr2	stalkie_big_nohaplotig	exon	17512900	17515033	99	-	.	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 2184 4323 +
Chr2	stalkie_big_nohaplotig	exon	17515104	17515223	100	-	.	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 2064 2183 +
Chr2	stalkie_big_nohaplotig	exon	17515279	17515351	100	-	.	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 1991 2063 +
Chr2	stalkie_big_nohaplotig	exon	17515466	17515897	100	-	.	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 1559 1990 +
Chr2	stalkie_big_nohaplotig	exon	17516035	17516154	100	-	.	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 1439 1558 +
Chr2	stalkie_big_nohaplotig	exon	17516218	17516334	100	-	.	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 1322 1438 +
Chr2	stalkie_big_nohaplotig	exon	17516390	17516651	100	-	.	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 1060 1321 +
Chr2	stalkie_big_nohaplotig	exon	17516709	17516909	100	-	.	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 859 1059 +
Chr2	stalkie_big_nohaplotig	exon	17516967	17517208	100	-	.	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 617 858 +
Chr2	stalkie_big_nohaplotig	exon	17517287	17517531	100	-	.	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 372 616 +
Chr2	stalkie_big_nohaplotig	exon	17517586	17517815	100	-	.	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 142 371 +
Chr2	stalkie_big_nohaplotig	exon	17517896	17518036	100	-	.	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 1 141 +
Chr2	stalkie_big_nohaplotig	CDS	17509525	17509553	.	-	0	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 5923 5952 +
Chr2	stalkie_big_nohaplotig	CDS	17509617	17510187	.	-	1	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 5352 5922 +
Chr2	stalkie_big_nohaplotig	CDS	17510242	17510460	.	-	1	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 5133 5351 +
Chr2	stalkie_big_nohaplotig	CDS	17510514	17510707	.	-	0	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 4939 5132 +
Chr2	stalkie_big_nohaplotig	CDS	17510762	17510902	.	-	0	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 4798 4938 +
Chr2	stalkie_big_nohaplotig	CDS	17512365	17512838	.	-	0	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 4324 4797 +
Chr2	stalkie_big_nohaplotig	CDS	17512900	17515033	.	-	1	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 2184 4323 +
Chr2	stalkie_big_nohaplotig	CDS	17515104	17515223	.	-	1	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 2064 2183 +
Chr2	stalkie_big_nohaplotig	CDS	17515279	17515351	.	-	2	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 1991 2063 +
Chr2	stalkie_big_nohaplotig	CDS	17515466	17515897	.	-	2	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 1559 1990 +
Chr2	stalkie_big_nohaplotig	CDS	17516035	17516154	.	-	2	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 1439 1558 +
Chr2	stalkie_big_nohaplotig	CDS	17516218	17516334	.	-	2	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 1322 1438 +
Chr2	stalkie_big_nohaplotig	CDS	17516390	17516651	.	-	0	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 1060 1321 +
Chr2	stalkie_big_nohaplotig	CDS	17516709	17516909	.	-	0	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 859 1059 +
Chr2	stalkie_big_nohaplotig	CDS	17516967	17517208	.	-	2	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 617 858 +
Chr2	stalkie_big_nohaplotig	CDS	17517287	17517531	.	-	1	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 372 616 +
Chr2	stalkie_big_nohaplotig	CDS	17517586	17517815	.	-	0	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 142 371 +
Chr2	stalkie_big_nohaplotig	CDS	17517896	17518036	.	-	0	Parent=FBgn0002891.1.mrna1;Target=FBgn0002891.1 1 141 +
Chr2	gffcl	locus	17522832	18389056	.	+	.	ID=RLOC_00015204;geneIDs=comp156757_c0_seq1.path1;transcripts=comp156757_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17522832	18389056	.	+	.	ID=comp156757_c0_seq1.mrna1;geneID=comp156757_c0_seq1.path1;Name=comp156757_c0_seq1;Dir=indeterminatecoverage=86.4;identity=99.7;matches=769;mismatches=1;indels=1;unknowns=0;Target=comp156757_c0_seq1 629 625 .;locus=RLOC_00015204
Chr2	stalkie_big_nohaplotig	exon	17522832	17523363	99	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 531 1 .
Chr2	stalkie_big_nohaplotig	exon	18223206	18223210	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 536 532 .
Chr2	stalkie_big_nohaplotig	exon	18236954	18236957	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 540 537 .
Chr2	stalkie_big_nohaplotig	exon	18241926	18241933	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 548 541 .
Chr2	stalkie_big_nohaplotig	exon	18241937	18241938	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 606 605 .
Chr2	stalkie_big_nohaplotig	exon	18249898	18249899	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 608 607 .
Chr2	stalkie_big_nohaplotig	exon	18260233	18260242	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 618 609 .
Chr2	stalkie_big_nohaplotig	exon	18278796	18278806	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 629 619 .
Chr2	stalkie_big_nohaplotig	exon	18278829	18278833	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 666 662 .
Chr2	stalkie_big_nohaplotig	exon	18279357	18279361	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 671 667 .
Chr2	stalkie_big_nohaplotig	exon	18281568	18281571	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 675 672 .
Chr2	stalkie_big_nohaplotig	exon	18282858	18282867	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 685 676 .
Chr2	stalkie_big_nohaplotig	exon	18284806	18284807	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 687 686 .
Chr2	stalkie_big_nohaplotig	exon	18284863	18284872	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 697 688 .
Chr2	stalkie_big_nohaplotig	exon	18286135	18286144	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 708 699 .
Chr2	stalkie_big_nohaplotig	exon	18287257	18287261	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 714 710 .
Chr2	stalkie_big_nohaplotig	exon	18287910	18287916	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 721 715 .
Chr2	stalkie_big_nohaplotig	exon	18288232	18288237	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 727 722 .
Chr2	stalkie_big_nohaplotig	exon	18288676	18288678	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 730 728 .
Chr2	stalkie_big_nohaplotig	exon	18290919	18290924	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 736 731 .
Chr2	stalkie_big_nohaplotig	exon	18293010	18293021	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 748 737 .
Chr2	stalkie_big_nohaplotig	exon	18301117	18301125	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 765 757 .
Chr2	stalkie_big_nohaplotig	exon	18303737	18303741	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 774 770 .
Chr2	stalkie_big_nohaplotig	exon	18305319	18305320	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 776 775 .
Chr2	stalkie_big_nohaplotig	exon	18305394	18305401	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 784 777 .
Chr2	stalkie_big_nohaplotig	exon	18309102	18309109	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 792 785 .
Chr2	stalkie_big_nohaplotig	exon	18309140	18309146	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 827 821 .
Chr2	stalkie_big_nohaplotig	exon	18316168	18316174	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 834 828 .
Chr2	stalkie_big_nohaplotig	exon	18317683	18317684	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 836 835 .
Chr2	stalkie_big_nohaplotig	exon	18322856	18322861	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 842 837 .
Chr2	stalkie_big_nohaplotig	exon	18334889	18334891	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 845 843 .
Chr2	stalkie_big_nohaplotig	exon	18339176	18339182	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 852 846 .
Chr2	stalkie_big_nohaplotig	exon	18339892	18339893	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 854 853 .
Chr2	stalkie_big_nohaplotig	exon	18345397	18345398	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 856 855 .
Chr2	stalkie_big_nohaplotig	exon	18351323	18351329	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 863 857 .
Chr2	stalkie_big_nohaplotig	exon	18366459	18366466	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 871 864 .
Chr2	stalkie_big_nohaplotig	exon	18366581	18366585	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 876 872 .
Chr2	stalkie_big_nohaplotig	exon	18373682	18373684	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 879 877 .
Chr2	stalkie_big_nohaplotig	exon	18380454	18380465	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 891 880 .
Chr2	stalkie_big_nohaplotig	exon	18382526	18382532	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 898 892 .
Chr2	stalkie_big_nohaplotig	exon	18389055	18389056	100	+	.	Parent=comp156757_c0_seq1.mrna1;Target=comp156757_c0_seq1 900 899 .
Chr2	stalkie_big_nohaplotig	CDS	18278802	18278806	.	+	0	Parent=comp156757_c0_seq1.mrna1
Chr2	gffcl	locus	17524412	17530104	.	-	.	ID=RLOC_00015205;geneIDs=FBgn0010014.1.path1;transcripts=FBgn0010014.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17524412	17530104	.	-	.	ID=FBgn0010014.1.mrna1;geneID=FBgn0010014.1.path1;Name=FBgn0010014.1;Dir=sensecoverage=98.4;identity=100.0;matches=508;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015205
Chr2	stalkie_big_nohaplotig	exon	17524412	17524579	100	-	.	Parent=FBgn0010014.1.mrna1;Target=FBgn0010014.1 349 516 +
Chr2	stalkie_big_nohaplotig	exon	17524645	17524943	100	-	.	Parent=FBgn0010014.1.mrna1;Target=FBgn0010014.1 50 348 +
Chr2	stalkie_big_nohaplotig	exon	17530064	17530104	100	-	.	Parent=FBgn0010014.1.mrna1;Target=FBgn0010014.1 9 49 +
Chr2	stalkie_big_nohaplotig	CDS	17524412	17524579	.	-	0	Parent=FBgn0010014.1.mrna1;Target=FBgn0010014.1 349 516 +
Chr2	stalkie_big_nohaplotig	CDS	17524645	17524943	.	-	2	Parent=FBgn0010014.1.mrna1;Target=FBgn0010014.1 50 348 +
Chr2	stalkie_big_nohaplotig	CDS	17530064	17530103	.	-	0	Parent=FBgn0010014.1.mrna1;Target=FBgn0010014.1 10 49 +
Chr2	gffcl	locus	17534706	17539559	.	+	.	ID=RLOC_00015206;geneIDs=FBgn0033757.1.path1;transcripts=FBgn0033757.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17534706	17539559	.	+	.	ID=FBgn0033757.1.mrna1;geneID=FBgn0033757.1.path1;Name=FBgn0033757.1;Dir=sensecoverage=100.0;identity=100.0;matches=2517;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015206
Chr2	stalkie_big_nohaplotig	exon	17534706	17534875	100	+	.	Parent=FBgn0033757.1.mrna1;Target=FBgn0033757.1 1 170 +
Chr2	stalkie_big_nohaplotig	exon	17535586	17536003	100	+	.	Parent=FBgn0033757.1.mrna1;Target=FBgn0033757.1 171 588 +
Chr2	stalkie_big_nohaplotig	exon	17536067	17536343	100	+	.	Parent=FBgn0033757.1.mrna1;Target=FBgn0033757.1 589 865 +
Chr2	stalkie_big_nohaplotig	exon	17536401	17536669	100	+	.	Parent=FBgn0033757.1.mrna1;Target=FBgn0033757.1 866 1134 +
Chr2	stalkie_big_nohaplotig	exon	17536737	17537069	100	+	.	Parent=FBgn0033757.1.mrna1;Target=FBgn0033757.1 1135 1467 +
Chr2	stalkie_big_nohaplotig	exon	17537504	17537707	100	+	.	Parent=FBgn0033757.1.mrna1;Target=FBgn0033757.1 1468 1671 +
Chr2	stalkie_big_nohaplotig	exon	17537769	17537975	100	+	.	Parent=FBgn0033757.1.mrna1;Target=FBgn0033757.1 1672 1878 +
Chr2	stalkie_big_nohaplotig	exon	17538105	17538190	100	+	.	Parent=FBgn0033757.1.mrna1;Target=FBgn0033757.1 1879 1964 +
Chr2	stalkie_big_nohaplotig	exon	17538261	17538417	100	+	.	Parent=FBgn0033757.1.mrna1;Target=FBgn0033757.1 1965 2121 +
Chr2	stalkie_big_nohaplotig	exon	17539098	17539245	100	+	.	Parent=FBgn0033757.1.mrna1;Target=FBgn0033757.1 2122 2269 +
Chr2	stalkie_big_nohaplotig	exon	17539312	17539559	100	+	.	Parent=FBgn0033757.1.mrna1;Target=FBgn0033757.1 2270 2517 +
Chr2	stalkie_big_nohaplotig	CDS	17534706	17534875	.	+	0	Parent=FBgn0033757.1.mrna1;Target=FBgn0033757.1 1 170 +
Chr2	stalkie_big_nohaplotig	CDS	17535586	17536003	.	+	1	Parent=FBgn0033757.1.mrna1;Target=FBgn0033757.1 171 588 +
Chr2	stalkie_big_nohaplotig	CDS	17536067	17536343	.	+	0	Parent=FBgn0033757.1.mrna1;Target=FBgn0033757.1 589 865 +
Chr2	stalkie_big_nohaplotig	CDS	17536401	17536669	.	+	2	Parent=FBgn0033757.1.mrna1;Target=FBgn0033757.1 866 1134 +
Chr2	stalkie_big_nohaplotig	CDS	17536737	17537069	.	+	0	Parent=FBgn0033757.1.mrna1;Target=FBgn0033757.1 1135 1467 +
Chr2	stalkie_big_nohaplotig	CDS	17537504	17537707	.	+	0	Parent=FBgn0033757.1.mrna1;Target=FBgn0033757.1 1468 1671 +
Chr2	stalkie_big_nohaplotig	CDS	17537769	17537975	.	+	0	Parent=FBgn0033757.1.mrna1;Target=FBgn0033757.1 1672 1878 +
Chr2	stalkie_big_nohaplotig	CDS	17538105	17538190	.	+	0	Parent=FBgn0033757.1.mrna1;Target=FBgn0033757.1 1879 1964 +
Chr2	stalkie_big_nohaplotig	CDS	17538261	17538417	.	+	1	Parent=FBgn0033757.1.mrna1;Target=FBgn0033757.1 1965 2121 +
Chr2	stalkie_big_nohaplotig	CDS	17539098	17539245	.	+	0	Parent=FBgn0033757.1.mrna1;Target=FBgn0033757.1 2122 2269 +
Chr2	stalkie_big_nohaplotig	CDS	17539312	17539559	.	+	2	Parent=FBgn0033757.1.mrna1;Target=FBgn0033757.1 2270 2517 +
Chr2	gffcl	locus	17540845	17542095	.	-	.	ID=RLOC_00015207;geneIDs=comp56663_c0_seq1.path1;transcripts=comp56663_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17540845	17542095	.	-	.	ID=comp56663_c0_seq1.mrna1;geneID=comp56663_c0_seq1.path1;Name=comp56663_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1250;mismatches=1;indels=0;unknowns=0;Target=comp56663_c0_seq1 1251 1 .;CDS_Target=comp56663_c0_seq1 96 1 .;locus=RLOC_00015207
Chr2	stalkie_big_nohaplotig	exon	17540845	17542095	99	-	.	Parent=comp56663_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17542000	17542095	.	-	0	Parent=comp56663_c0_seq1.mrna1
Chr2	gffcl	locus	17543526	17544169	.	+	.	ID=RLOC_00015208;geneIDs=comp156479_c0_seq1.path1;transcripts=comp156479_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17543526	17544169	.	+	.	ID=comp156479_c0_seq1.mrna1;geneID=comp156479_c0_seq1.path1;Name=comp156479_c0_seq1;Dir=indeterminatecoverage=60.1;identity=97.4;matches=644;mismatches=0;indels=17;unknowns=0;Target=comp156479_c0_seq1 1100 440 .;CDS_Target=comp156479_c0_seq1 629 471 .;locus=RLOC_00015208
Chr2	stalkie_big_nohaplotig	exon	17543526	17544169	97	+	.	Parent=comp156479_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17543557	17543715	.	+	0	Parent=comp156479_c0_seq1.mrna1
Chr2	gffcl	locus	17544392	17544930	.	-	.	ID=RLOC_00015209;geneIDs=comp142785_c0_seq1.path1;transcripts=comp142785_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17544392	17544930	.	-	.	ID=comp142785_c0_seq1.mrna1;geneID=comp142785_c0_seq1.path1;Name=comp142785_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.6;matches=537;mismatches=2;indels=0;unknowns=0;Target=comp142785_c0_seq1 540 2 .;CDS_Target=comp142785_c0_seq1 64 2 .;locus=RLOC_00015209
Chr2	stalkie_big_nohaplotig	exon	17544392	17544930	99	-	.	Parent=comp142785_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17544868	17544930	.	-	0	Parent=comp142785_c0_seq1.mrna1
Chr2	gffcl	locus	17545120	17545589	.	-	.	ID=RLOC_00015210;geneIDs=comp141851_c0_seq1.path1;transcripts=comp141851_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17545120	17545589	.	-	.	ID=comp141851_c0_seq1.mrna1;geneID=comp141851_c0_seq1.path1;Name=comp141851_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=468;mismatches=2;indels=0;unknowns=0;Target=comp141851_c0_seq1 470 1 .;CDS_Target=comp141851_c0_seq1 373 275 .;locus=RLOC_00015210
Chr2	stalkie_big_nohaplotig	exon	17545120	17545589	99	-	.	Parent=comp141851_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17545217	17545315	.	-	0	Parent=comp141851_c0_seq1.mrna1
Chr2	gffcl	locus	17553547	17558453	.	-	.	ID=RLOC_00015211;geneIDs=FBgn0004435.1.path1,comp47645_c0_seq1.path1,comp147063_c0_seq1.path1;transcripts=FBgn0004435.1.mrna1,comp47645_c0_seq1.mrna1,comp147063_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17553547	17558453	.	-	.	ID=FBgn0004435.1.mrna1;geneID=FBgn0004435.1.path1;Name=FBgn0004435.1;Dir=sensecoverage=100.0;identity=100.0;matches=1080;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015211
Chr2	stalkie_big_nohaplotig	exon	17553547	17553626	100	-	.	Parent=FBgn0004435.1.mrna1;Target=FBgn0004435.1 1001 1080 +
Chr2	stalkie_big_nohaplotig	exon	17554297	17554404	100	-	.	Parent=FBgn0004435.1.mrna1;Target=FBgn0004435.1 893 1000 +
Chr2	stalkie_big_nohaplotig	exon	17554549	17554702	100	-	.	Parent=FBgn0004435.1.mrna1;Target=FBgn0004435.1 739 892 +
Chr2	stalkie_big_nohaplotig	exon	17554777	17554906	100	-	.	Parent=FBgn0004435.1.mrna1;Target=FBgn0004435.1 609 738 +
Chr2	stalkie_big_nohaplotig	exon	17555143	17555271	100	-	.	Parent=FBgn0004435.1.mrna1;Target=FBgn0004435.1 480 608 +
Chr2	stalkie_big_nohaplotig	exon	17556474	17556628	100	-	.	Parent=FBgn0004435.1.mrna1;Target=FBgn0004435.1 325 479 +
Chr2	stalkie_big_nohaplotig	exon	17556689	17556873	100	-	.	Parent=FBgn0004435.1.mrna1;Target=FBgn0004435.1 140 324 +
Chr2	stalkie_big_nohaplotig	exon	17558315	17558453	100	-	.	Parent=FBgn0004435.1.mrna1;Target=FBgn0004435.1 1 139 +
Chr2	stalkie_big_nohaplotig	CDS	17553547	17553626	.	-	2	Parent=FBgn0004435.1.mrna1;Target=FBgn0004435.1 1001 1080 +
Chr2	stalkie_big_nohaplotig	CDS	17554297	17554404	.	-	2	Parent=FBgn0004435.1.mrna1;Target=FBgn0004435.1 893 1000 +
Chr2	stalkie_big_nohaplotig	CDS	17554549	17554702	.	-	0	Parent=FBgn0004435.1.mrna1;Target=FBgn0004435.1 739 892 +
Chr2	stalkie_big_nohaplotig	CDS	17554777	17554906	.	-	1	Parent=FBgn0004435.1.mrna1;Target=FBgn0004435.1 609 738 +
Chr2	stalkie_big_nohaplotig	CDS	17555143	17555271	.	-	1	Parent=FBgn0004435.1.mrna1;Target=FBgn0004435.1 480 608 +
Chr2	stalkie_big_nohaplotig	CDS	17556474	17556628	.	-	0	Parent=FBgn0004435.1.mrna1;Target=FBgn0004435.1 325 479 +
Chr2	stalkie_big_nohaplotig	CDS	17556689	17556873	.	-	2	Parent=FBgn0004435.1.mrna1;Target=FBgn0004435.1 140 324 +
Chr2	stalkie_big_nohaplotig	CDS	17558315	17558453	.	-	0	Parent=FBgn0004435.1.mrna1;Target=FBgn0004435.1 1 139 +
Chr2	stalkie_big_nohaplotig	mRNA	17554359	17554570	.	-	.	ID=comp47645_c0_seq1.mrna1;geneID=comp47645_c0_seq1.path1;Name=comp47645_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=211;mismatches=1;indels=0;unknowns=0;Target=comp47645_c0_seq1 212 1 .;CDS_Target=comp47645_c0_seq1 72 1 .;locus=RLOC_00015211
Chr2	stalkie_big_nohaplotig	exon	17554359	17554570	99	-	.	Parent=comp47645_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17554499	17554570	.	-	0	Parent=comp47645_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17555248	17555629	.	-	.	ID=comp147063_c0_seq1.mrna1;geneID=comp147063_c0_seq1.path1;Name=comp147063_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=380;mismatches=2;indels=0;unknowns=0;Target=comp147063_c0_seq1 382 1 .;CDS_Target=comp147063_c0_seq1 110 42 .;locus=RLOC_00015211
Chr2	stalkie_big_nohaplotig	exon	17555248	17555629	99	-	.	Parent=comp147063_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17555520	17555588	.	-	0	Parent=comp147063_c0_seq1.mrna1
Chr2	gffcl	locus	17572086	17572980	.	-	.	ID=RLOC_00015212;geneIDs=comp151472_c0_seq1.path1;transcripts=comp151472_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17572086	17572980	.	-	.	ID=comp151472_c0_seq1.mrna1;geneID=comp151472_c0_seq1.path1;Name=comp151472_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=894;mismatches=1;indels=0;unknowns=0;Target=comp151472_c0_seq1 895 1 .;CDS_Target=comp151472_c0_seq1 141 1 .;locus=RLOC_00015212
Chr2	stalkie_big_nohaplotig	exon	17572086	17572980	99	-	.	Parent=comp151472_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17572840	17572980	.	-	0	Parent=comp151472_c0_seq1.mrna1
Chr2	gffcl	locus	17576989	17586562	.	.	.	ID=RLOC_00015213;geneIDs=FBgn0027356.1.path1,comp150793_c0_seq1.path1;transcripts=FBgn0027356.1.mrna1,comp150793_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17576989	17586562	.	-	.	ID=FBgn0027356.1.mrna1;geneID=FBgn0027356.1.path1;Name=FBgn0027356.1;Dir=sensecoverage=93.7;identity=100.0;matches=1026;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015213
Chr2	stalkie_big_nohaplotig	exon	17576989	17577066	100	-	.	Parent=FBgn0027356.1.mrna1;Target=FBgn0027356.1 1018 1095 +
Chr2	stalkie_big_nohaplotig	exon	17578496	17578638	100	-	.	Parent=FBgn0027356.1.mrna1;Target=FBgn0027356.1 875 1017 +
Chr2	stalkie_big_nohaplotig	exon	17584196	17584315	100	-	.	Parent=FBgn0027356.1.mrna1;Target=FBgn0027356.1 755 874 +
Chr2	stalkie_big_nohaplotig	exon	17584397	17584478	100	-	.	Parent=FBgn0027356.1.mrna1;Target=FBgn0027356.1 673 754 +
Chr2	stalkie_big_nohaplotig	exon	17585244	17585414	100	-	.	Parent=FBgn0027356.1.mrna1;Target=FBgn0027356.1 502 672 +
Chr2	stalkie_big_nohaplotig	exon	17585481	17585585	100	-	.	Parent=FBgn0027356.1.mrna1;Target=FBgn0027356.1 397 501 +
Chr2	stalkie_big_nohaplotig	exon	17585665	17585855	100	-	.	Parent=FBgn0027356.1.mrna1;Target=FBgn0027356.1 206 396 +
Chr2	stalkie_big_nohaplotig	exon	17586427	17586562	100	-	.	Parent=FBgn0027356.1.mrna1;Target=FBgn0027356.1 70 205 +
Chr2	stalkie_big_nohaplotig	CDS	17576989	17577066	.	-	0	Parent=FBgn0027356.1.mrna1;Target=FBgn0027356.1 1018 1095 +
Chr2	stalkie_big_nohaplotig	CDS	17578496	17578638	.	-	2	Parent=FBgn0027356.1.mrna1;Target=FBgn0027356.1 875 1017 +
Chr2	stalkie_big_nohaplotig	CDS	17584196	17584315	.	-	2	Parent=FBgn0027356.1.mrna1;Target=FBgn0027356.1 755 874 +
Chr2	stalkie_big_nohaplotig	CDS	17584397	17584478	.	-	0	Parent=FBgn0027356.1.mrna1;Target=FBgn0027356.1 673 754 +
Chr2	stalkie_big_nohaplotig	CDS	17585244	17585414	.	-	0	Parent=FBgn0027356.1.mrna1;Target=FBgn0027356.1 502 672 +
Chr2	stalkie_big_nohaplotig	CDS	17585481	17585585	.	-	0	Parent=FBgn0027356.1.mrna1;Target=FBgn0027356.1 397 501 +
Chr2	stalkie_big_nohaplotig	CDS	17585665	17585855	.	-	2	Parent=FBgn0027356.1.mrna1;Target=FBgn0027356.1 206 396 +
Chr2	stalkie_big_nohaplotig	CDS	17586427	17586562	.	-	0	Parent=FBgn0027356.1.mrna1;Target=FBgn0027356.1 70 205 +
Chr2	stalkie_big_nohaplotig	mRNA	17578617	17579271	.	+	.	ID=comp150793_c0_seq1.mrna1;geneID=comp150793_c0_seq1.path1;Name=comp150793_c0_seq1;Dir=indeterminatecoverage=96.0;identity=99.1;matches=649;mismatches=6;indels=0;unknowns=0;Target=comp150793_c0_seq1 655 1 .;CDS_Target=comp150793_c0_seq1 626 534 .;locus=RLOC_00015213
Chr2	stalkie_big_nohaplotig	exon	17578617	17579271	99	+	.	Parent=comp150793_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17579150	17579242	.	+	0	Parent=comp150793_c0_seq1.mrna1
Chr2	gffcl	locus	17579413	17580266	.	-	.	ID=RLOC_00015214;geneIDs=comp153290_c0_seq1.path1;transcripts=comp153290_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17579413	17580266	.	-	.	ID=comp153290_c0_seq1.mrna1;geneID=comp153290_c0_seq1.path1;Name=comp153290_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=851;mismatches=3;indels=0;unknowns=0;Target=comp153290_c0_seq1 854 1 .;CDS_Target=comp153290_c0_seq1 152 3 .;locus=RLOC_00015214
Chr2	stalkie_big_nohaplotig	exon	17579413	17580266	99	-	.	Parent=comp153290_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17580115	17580264	.	-	0	Parent=comp153290_c0_seq1.mrna1
Chr2	gffcl	locus	17581494	17581763	.	+	.	ID=RLOC_00015215;geneIDs=comp431950_c0_seq1.path1;transcripts=comp431950_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17581494	17581763	.	+	.	ID=comp431950_c0_seq1.mrna1;geneID=comp431950_c0_seq1.path1;Name=comp431950_c0_seq1;Dir=indeterminatecoverage=100.0;identity=88.5;matches=247;mismatches=20;indels=12;unknowns=0;Target=comp431950_c0_seq1 276 1 .;CDS_Target=comp431950_c0_seq1 124 2 .;locus=RLOC_00015215
Chr2	stalkie_big_nohaplotig	exon	17581494	17581763	88	+	.	Parent=comp431950_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17581495	17581617	.	+	0	Parent=comp431950_c0_seq1.mrna1
Chr2	gffcl	locus	17582521	17582741	.	-	.	ID=RLOC_00015216;geneIDs=comp145588_c0_seq1.path1;transcripts=comp145588_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17582521	17582741	.	-	.	ID=comp145588_c0_seq1.mrna1;geneID=comp145588_c0_seq1.path1;Name=comp145588_c0_seq1;Dir=indeterminatecoverage=98.2;identity=100.0;matches=221;mismatches=0;indels=0;unknowns=0;Target=comp145588_c0_seq1 225 5 .;CDS_Target=comp145588_c0_seq1 130 71 .;locus=RLOC_00015216
Chr2	stalkie_big_nohaplotig	exon	17582521	17582741	100	-	.	Parent=comp145588_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17582616	17582675	.	-	0	Parent=comp145588_c0_seq1.mrna1
Chr2	gffcl	locus	17583442	17583750	.	+	.	ID=RLOC_00015217;geneIDs=comp91635_c0_seq1.path1;transcripts=comp91635_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17583442	17583750	.	+	.	ID=comp91635_c0_seq1.mrna1;geneID=comp91635_c0_seq1.path1;Name=comp91635_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=309;mismatches=0;indels=0;unknowns=0;Target=comp91635_c0_seq1 309 1 .;CDS_Target=comp91635_c0_seq1 45 1 .;locus=RLOC_00015217
Chr2	stalkie_big_nohaplotig	exon	17583442	17583750	100	+	.	Parent=comp91635_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17583442	17583486	.	+	0	Parent=comp91635_c0_seq1.mrna1
Chr2	gffcl	locus	17629292	17630059	.	+	.	ID=RLOC_00015218;geneIDs=comp116718_c0_seq1.path1;transcripts=comp116718_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17629292	17630059	.	+	.	ID=comp116718_c0_seq1.mrna1;geneID=comp116718_c0_seq1.path1;Name=comp116718_c0_seq1;Dir=indeterminatecoverage=99.5;identity=100.0;matches=768;mismatches=0;indels=0;unknowns=0;Target=comp116718_c0_seq1 768 1 .;CDS_Target=comp116718_c0_seq1 169 2 .;locus=RLOC_00015218
Chr2	stalkie_big_nohaplotig	exon	17629292	17630059	100	+	.	Parent=comp116718_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17629293	17629460	.	+	0	Parent=comp116718_c0_seq1.mrna1
Chr2	gffcl	locus	17644828	17663516	.	+	.	ID=RLOC_00015220;geneIDs=comp152028_c0_seq1.path1;transcripts=comp152028_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17644828	17663516	.	+	.	ID=comp152028_c0_seq1.mrna1;geneID=comp152028_c0_seq1.path1;Name=comp152028_c0_seq1;Dir=antisensecoverage=100.0;identity=96.6;matches=548;mismatches=19;indels=0;unknowns=0;Target=comp152028_c0_seq1 101 196 .;locus=RLOC_00015220
Chr2	stalkie_big_nohaplotig	exon	17644828	17645069	97	+	.	Parent=comp152028_c0_seq1.mrna1;Target=comp152028_c0_seq1 326 567 -
Chr2	stalkie_big_nohaplotig	exon	17661575	17661681	100	+	.	Parent=comp152028_c0_seq1.mrna1;Target=comp152028_c0_seq1 219 325 -
Chr2	stalkie_big_nohaplotig	exon	17663299	17663516	94	+	.	Parent=comp152028_c0_seq1.mrna1;Target=comp152028_c0_seq1 1 218 -
Chr2	stalkie_big_nohaplotig	CDS	17663321	17663416	.	+	0	Parent=comp152028_c0_seq1.mrna1
Chr2	gffcl	locus	17658916	17659540	.	+	.	ID=RLOC_00015221;geneIDs=comp153821_c0_seq1.path1;transcripts=comp153821_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17658916	17659540	.	+	.	ID=comp153821_c0_seq1.mrna1;geneID=comp153821_c0_seq1.path1;Name=comp153821_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=622;mismatches=3;indels=0;unknowns=0;Target=comp153821_c0_seq1 625 1 .;CDS_Target=comp153821_c0_seq1 114 106 .;locus=RLOC_00015221
Chr2	stalkie_big_nohaplotig	exon	17658916	17659540	99	+	.	Parent=comp153821_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17659021	17659029	.	+	0	Parent=comp153821_c0_seq1.mrna1
Chr2	gffcl	locus	17659751	17661345	.	+	.	ID=RLOC_00015222;geneIDs=comp157509_c0_seq1.path1;transcripts=comp157509_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17659751	17661345	.	+	.	ID=comp157509_c0_seq1.mrna1;geneID=comp157509_c0_seq1.path1;Name=comp157509_c0_seq1;Dir=indeterminatecoverage=99.7;identity=85.1;matches=1487;mismatches=34;indels=226;unknowns=0;Target=comp157509_c0_seq1 1334 1230 .;locus=RLOC_00015222
Chr2	stalkie_big_nohaplotig	exon	17659751	17660130	98	+	.	Parent=comp157509_c0_seq1.mrna1;Target=comp157509_c0_seq1 380 1 .
Chr2	stalkie_big_nohaplotig	exon	17660205	17661345	81	+	.	Parent=comp157509_c0_seq1.mrna1;Target=comp157509_c0_seq1 1747 381 .
Chr2	stalkie_big_nohaplotig	CDS	17660828	17660932	.	+	0	Parent=comp157509_c0_seq1.mrna1
Chr2	gffcl	locus	17720395	17728240	.	+	.	ID=RLOC_00015223;geneIDs=comp153288_c0_seq1.path1;transcripts=comp153288_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17720395	17728240	.	+	.	ID=comp153288_c0_seq1.mrna1;geneID=comp153288_c0_seq1.path1;Name=comp153288_c0_seq1;Dir=antisensecoverage=99.8;identity=99.7;matches=898;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015223
Chr2	stalkie_big_nohaplotig	exon	17720395	17720688	99	+	.	Parent=comp153288_c0_seq1.mrna1;Target=comp153288_c0_seq1 610 903 -
Chr2	stalkie_big_nohaplotig	exon	17727292	17727668	100	+	.	Parent=comp153288_c0_seq1.mrna1;Target=comp153288_c0_seq1 233 609 -
Chr2	stalkie_big_nohaplotig	exon	17727839	17727875	100	+	.	Parent=comp153288_c0_seq1.mrna1;Target=comp153288_c0_seq1 196 232 -
Chr2	stalkie_big_nohaplotig	exon	17728048	17728240	98	+	.	Parent=comp153288_c0_seq1.mrna1;Target=comp153288_c0_seq1 3 195 -
Chr2	stalkie_big_nohaplotig	CDS	17727379	17727668	.	+	0	Parent=comp153288_c0_seq1.mrna1;Target=comp153288_c0_seq1 233 522 .
Chr2	stalkie_big_nohaplotig	CDS	17727839	17727875	.	+	1	Parent=comp153288_c0_seq1.mrna1;Target=comp153288_c0_seq1 196 232 .
Chr2	stalkie_big_nohaplotig	CDS	17728048	17728119	.	+	0	Parent=comp153288_c0_seq1.mrna1;Target=comp153288_c0_seq1 124 195 .
Chr2	gffcl	locus	17785247	17785555	.	-	.	ID=RLOC_00015224;geneIDs=comp151143_c4_seq1.path1;transcripts=comp151143_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17785247	17785555	.	-	.	ID=comp151143_c4_seq1.mrna1;geneID=comp151143_c4_seq1.path1;Name=comp151143_c4_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=306;mismatches=3;indels=0;unknowns=0;Target=comp151143_c4_seq1 309 1 .;CDS_Target=comp151143_c4_seq1 232 83 .;locus=RLOC_00015224
Chr2	stalkie_big_nohaplotig	exon	17785247	17785555	99	-	.	Parent=comp151143_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17785324	17785473	.	-	0	Parent=comp151143_c4_seq1.mrna1
Chr2	gffcl	locus	17887782	17888306	.	+	.	ID=RLOC_00015225;geneIDs=comp114812_c0_seq1.path1;transcripts=comp114812_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17887782	17888306	.	+	.	ID=comp114812_c0_seq1.mrna1;geneID=comp114812_c0_seq1.path1;Name=comp114812_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.4;matches=501;mismatches=5;indels=19;unknowns=0;Target=comp114812_c0_seq1 506 1 .;CDS_Target=comp114812_c0_seq1 457 320 .;locus=RLOC_00015225
Chr2	stalkie_big_nohaplotig	exon	17887782	17888306	95	+	.	Parent=comp114812_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17888118	17888255	.	+	0	Parent=comp114812_c0_seq1.mrna1
Chr2	gffcl	locus	17923963	17924641	.	+	.	ID=RLOC_00015226;geneIDs=FBgn0034711.path1;transcripts=FBgn0034711.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17923963	17924641	.	+	.	ID=FBgn0034711.mrna1;geneID=FBgn0034711.path1;Name=FBgn0034711;Dir=sensecoverage=100.0;identity=99.8;matches=619;mismatches=1;indels=0;unknowns=1;locus=RLOC_00015226
Chr2	stalkie_big_nohaplotig	exon	17923963	17924509	99	+	.	Parent=FBgn0034711.mrna1;Target=FBgn0034711 1 547 +
Chr2	stalkie_big_nohaplotig	exon	17924568	17924641	100	+	.	Parent=FBgn0034711.mrna1;Target=FBgn0034711 548 621 +
Chr2	stalkie_big_nohaplotig	CDS	17923963	17924509	.	+	0	Parent=FBgn0034711.mrna1;Target=FBgn0034711 1 547 +
Chr2	stalkie_big_nohaplotig	CDS	17924568	17924641	.	+	2	Parent=FBgn0034711.mrna1;Target=FBgn0034711 548 621 +
Chr2	gffcl	locus	17933178	17933850	.	+	.	ID=RLOC_00015228;geneIDs=FBgn0034710.path1;transcripts=FBgn0034710.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17933178	17933850	.	+	.	ID=FBgn0034710.mrna1;geneID=FBgn0034710.path1;Name=FBgn0034710;Dir=sensecoverage=100.0;identity=100.0;matches=614;mismatches=0;indels=0;unknowns=1;locus=RLOC_00015228
Chr2	stalkie_big_nohaplotig	exon	17933178	17933568	100	+	.	Parent=FBgn0034710.mrna1;Target=FBgn0034710 1 391 +
Chr2	stalkie_big_nohaplotig	exon	17933627	17933850	100	+	.	Parent=FBgn0034710.mrna1;Target=FBgn0034710 392 615 +
Chr2	stalkie_big_nohaplotig	CDS	17933178	17933568	.	+	0	Parent=FBgn0034710.mrna1;Target=FBgn0034710 1 391 +
Chr2	stalkie_big_nohaplotig	CDS	17933627	17933850	.	+	2	Parent=FBgn0034710.mrna1;Target=FBgn0034710 392 615 +
Chr2	gffcl	locus	17964135	17964525	.	-	.	ID=RLOC_00015229;geneIDs=comp333276_c0_seq1.path1;transcripts=comp333276_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17964135	17964525	.	-	.	ID=comp333276_c0_seq1.mrna1;geneID=comp333276_c0_seq1.path1;Name=comp333276_c0_seq1;Dir=indeterminatecoverage=95.8;identity=100.0;matches=391;mismatches=0;indels=0;unknowns=0;Target=comp333276_c0_seq1 408 18 .;CDS_Target=comp333276_c0_seq1 369 187 .;locus=RLOC_00015229
Chr2	stalkie_big_nohaplotig	exon	17964135	17964525	100	-	.	Parent=comp333276_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17964174	17964356	.	-	0	Parent=comp333276_c0_seq1.mrna1
Chr2	gffcl	locus	17965680	17966600	.	+	.	ID=RLOC_00015230;geneIDs=FBgn0015522.1.path1;transcripts=FBgn0015522.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17965680	17966600	.	+	.	ID=FBgn0015522.1.mrna1;geneID=FBgn0015522.1.path1;Name=FBgn0015522.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=921;mismatches=0;indels=0;unknowns=0;Target=FBgn0015522.1 921 1 .;locus=RLOC_00015230
Chr2	stalkie_big_nohaplotig	exon	17965680	17966600	100	+	.	Parent=FBgn0015522.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17965680	17966600	.	+	0	Parent=FBgn0015522.1.mrna1
Chr2	gffcl	locus	17966656	17967269	.	+	.	ID=RLOC_00015231;geneIDs=comp148272_c0_seq1.path1;transcripts=comp148272_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17966656	17967269	.	+	.	ID=comp148272_c0_seq1.mrna1;geneID=comp148272_c0_seq1.path1;Name=comp148272_c0_seq1;Dir=indeterminatecoverage=94.0;identity=100.0;matches=614;mismatches=0;indels=0;unknowns=0;Target=comp148272_c0_seq1 614 1 .;CDS_Target=comp148272_c0_seq1 192 124 .;locus=RLOC_00015231
Chr2	stalkie_big_nohaplotig	exon	17966656	17967269	100	+	.	Parent=comp148272_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17966779	17966847	.	+	0	Parent=comp148272_c0_seq1.mrna1
Chr2	gffcl	locus	17992777	17994308	.	-	.	ID=RLOC_00015232;geneIDs=comp162254_c1_seq1.path1;transcripts=comp162254_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	17992777	17994308	.	-	.	ID=comp162254_c1_seq1.mrna1;geneID=comp162254_c1_seq1.path1;Name=comp162254_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1526;mismatches=6;indels=0;unknowns=0;Target=comp162254_c1_seq1 1532 1 .;CDS_Target=comp162254_c1_seq1 438 178 .;locus=RLOC_00015232
Chr2	stalkie_big_nohaplotig	exon	17992777	17994308	99	-	.	Parent=comp162254_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	17993871	17994131	.	-	0	Parent=comp162254_c1_seq1.mrna1
Chr2	gffcl	locus	18003936	18040029	.	-	.	ID=RLOC_00015233;geneIDs=FBgn0003701.1.path1,FBgn0263121.1.path1;transcripts=FBgn0003701.1.mrna1,FBgn0263121.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18003936	18040029	.	-	.	ID=FBgn0003701.1.mrna1;geneID=FBgn0003701.1.path1;Name=FBgn0003701.1;Dir=sensecoverage=87.6;identity=98.4;matches=4070;mismatches=35;indels=30;unknowns=0;locus=RLOC_00015233
Chr2	stalkie_big_nohaplotig	exon	18003936	18003956	80	-	.	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 4112 4132 +
Chr2	stalkie_big_nohaplotig	exon	18007645	18007653	100	-	.	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 4103 4111 +
Chr2	stalkie_big_nohaplotig	exon	18010520	18010561	52	-	.	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 4046 4102 +
Chr2	stalkie_big_nohaplotig	exon	18014292	18014299	100	-	.	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 4038 4045 +
Chr2	stalkie_big_nohaplotig	exon	18016329	18016380	48	-	.	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 3977 4037 +
Chr2	stalkie_big_nohaplotig	exon	18017471	18017474	100	-	.	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 3973 3976 +
Chr2	stalkie_big_nohaplotig	exon	18021357	18021358	100	-	.	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 3971 3972 +
Chr2	stalkie_big_nohaplotig	exon	18034736	18035489	100	-	.	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 3217 3970 +
Chr2	stalkie_big_nohaplotig	exon	18036483	18036659	100	-	.	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 3040 3216 +
Chr2	stalkie_big_nohaplotig	exon	18036808	18037647	99	-	.	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 2200 3039 +
Chr2	stalkie_big_nohaplotig	exon	18037711	18038622	100	-	.	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 1288 2199 +
Chr2	stalkie_big_nohaplotig	exon	18038680	18039651	100	-	.	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 316 1287 +
Chr2	stalkie_big_nohaplotig	exon	18039715	18040029	100	-	.	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 1 315 +
Chr2	stalkie_big_nohaplotig	CDS	18003937	18003956	.	-	2	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 4112 4131 +
Chr2	stalkie_big_nohaplotig	CDS	18007645	18007653	.	-	2	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 4103 4111 +
Chr2	stalkie_big_nohaplotig	CDS	18010520	18010561	.	-	2	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 4046 4102 +
Chr2	stalkie_big_nohaplotig	CDS	18014292	18014299	.	-	1	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 4038 4045 +
Chr2	stalkie_big_nohaplotig	CDS	18016329	18016380	.	-	2	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 3977 4037 +
Chr2	stalkie_big_nohaplotig	CDS	18017471	18017474	.	-	0	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 3973 3976 +
Chr2	stalkie_big_nohaplotig	CDS	18021357	18021358	.	-	2	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 3971 3972 +
Chr2	stalkie_big_nohaplotig	CDS	18034736	18035489	.	-	0	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 3217 3970 +
Chr2	stalkie_big_nohaplotig	CDS	18036483	18036659	.	-	0	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 3040 3216 +
Chr2	stalkie_big_nohaplotig	CDS	18036808	18037647	.	-	0	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 2200 3039 +
Chr2	stalkie_big_nohaplotig	CDS	18037711	18038622	.	-	0	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 1288 2199 +
Chr2	stalkie_big_nohaplotig	CDS	18038680	18039651	.	-	0	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 316 1287 +
Chr2	stalkie_big_nohaplotig	CDS	18039715	18040029	.	-	0	Parent=FBgn0003701.1.mrna1;Target=FBgn0003701.1 1 315 +
Chr2	stalkie_big_nohaplotig	mRNA	18016473	18017470	.	-	.	ID=FBgn0263121.1.mrna1;geneID=FBgn0263121.1.path1;Name=FBgn0263121.1;Dir=sensecoverage=100.0;identity=100.0;matches=744;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015233
Chr2	stalkie_big_nohaplotig	exon	18016473	18016795	100	-	.	Parent=FBgn0263121.1.mrna1;Target=FBgn0263121.1 422 744 +
Chr2	stalkie_big_nohaplotig	exon	18016856	18017011	100	-	.	Parent=FBgn0263121.1.mrna1;Target=FBgn0263121.1 266 421 +
Chr2	stalkie_big_nohaplotig	exon	18017069	18017245	100	-	.	Parent=FBgn0263121.1.mrna1;Target=FBgn0263121.1 89 265 +
Chr2	stalkie_big_nohaplotig	exon	18017383	18017470	100	-	.	Parent=FBgn0263121.1.mrna1;Target=FBgn0263121.1 1 88 +
Chr2	stalkie_big_nohaplotig	CDS	18016473	18016795	.	-	2	Parent=FBgn0263121.1.mrna1;Target=FBgn0263121.1 422 744 +
Chr2	stalkie_big_nohaplotig	CDS	18016856	18017011	.	-	2	Parent=FBgn0263121.1.mrna1;Target=FBgn0263121.1 266 421 +
Chr2	stalkie_big_nohaplotig	CDS	18017069	18017245	.	-	2	Parent=FBgn0263121.1.mrna1;Target=FBgn0263121.1 89 265 +
Chr2	stalkie_big_nohaplotig	CDS	18017383	18017470	.	-	0	Parent=FBgn0263121.1.mrna1;Target=FBgn0263121.1 1 88 +
Chr2	gffcl	locus	18014479	18016304	.	+	.	ID=RLOC_00015234;geneIDs=FBgn0003082.1.path1;transcripts=FBgn0003082.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18014479	18016304	.	+	.	ID=FBgn0003082.1.mrna1;geneID=FBgn0003082.1.path1;Name=FBgn0003082.1;Dir=sensecoverage=100.0;identity=100.0;matches=1656;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015234
Chr2	stalkie_big_nohaplotig	exon	18014479	18014543	100	+	.	Parent=FBgn0003082.1.mrna1;Target=FBgn0003082.1 1 65 +
Chr2	stalkie_big_nohaplotig	exon	18014598	18015595	100	+	.	Parent=FBgn0003082.1.mrna1;Target=FBgn0003082.1 66 1063 +
Chr2	stalkie_big_nohaplotig	exon	18015656	18016090	100	+	.	Parent=FBgn0003082.1.mrna1;Target=FBgn0003082.1 1064 1498 +
Chr2	stalkie_big_nohaplotig	exon	18016147	18016304	100	+	.	Parent=FBgn0003082.1.mrna1;Target=FBgn0003082.1 1499 1656 +
Chr2	stalkie_big_nohaplotig	CDS	18014479	18014543	.	+	0	Parent=FBgn0003082.1.mrna1;Target=FBgn0003082.1 1 65 +
Chr2	stalkie_big_nohaplotig	CDS	18014598	18015595	.	+	1	Parent=FBgn0003082.1.mrna1;Target=FBgn0003082.1 66 1063 +
Chr2	stalkie_big_nohaplotig	CDS	18015656	18016090	.	+	2	Parent=FBgn0003082.1.mrna1;Target=FBgn0003082.1 1064 1498 +
Chr2	stalkie_big_nohaplotig	CDS	18016147	18016304	.	+	2	Parent=FBgn0003082.1.mrna1;Target=FBgn0003082.1 1499 1656 +
Chr2	gffcl	locus	18019539	18025066	.	+	.	ID=RLOC_00015235;geneIDs=FBgn0039537.2.path1,FBgn0039537.3.path1;transcripts=FBgn0039537.2.mrna1,FBgn0039537.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18019539	18023328	.	+	.	ID=FBgn0039537.2.mrna1;geneID=FBgn0039537.2.path1;Name=FBgn0039537.2;Dir=sensecoverage=100.0;identity=98.9;matches=920;mismatches=10;indels=0;unknowns=0;locus=RLOC_00015235
Chr2	stalkie_big_nohaplotig	exon	18019539	18019630	100	+	.	Parent=FBgn0039537.2.mrna1;Target=FBgn0039537.2 1 92 +
Chr2	stalkie_big_nohaplotig	exon	18019698	18019819	100	+	.	Parent=FBgn0039537.2.mrna1;Target=FBgn0039537.2 93 214 +
Chr2	stalkie_big_nohaplotig	exon	18022493	18022534	100	+	.	Parent=FBgn0039537.2.mrna1;Target=FBgn0039537.2 215 256 +
Chr2	stalkie_big_nohaplotig	exon	18022590	18022803	95	+	.	Parent=FBgn0039537.2.mrna1;Target=FBgn0039537.2 257 470 +
Chr2	stalkie_big_nohaplotig	exon	18022869	18023328	100	+	.	Parent=FBgn0039537.2.mrna1;Target=FBgn0039537.2 471 930 +
Chr2	stalkie_big_nohaplotig	CDS	18019539	18019630	.	+	0	Parent=FBgn0039537.2.mrna1;Target=FBgn0039537.2 1 92 +
Chr2	stalkie_big_nohaplotig	CDS	18019698	18019819	.	+	1	Parent=FBgn0039537.2.mrna1;Target=FBgn0039537.2 93 214 +
Chr2	stalkie_big_nohaplotig	CDS	18022493	18022534	.	+	2	Parent=FBgn0039537.2.mrna1;Target=FBgn0039537.2 215 256 +
Chr2	stalkie_big_nohaplotig	CDS	18022590	18022803	.	+	2	Parent=FBgn0039537.2.mrna1;Target=FBgn0039537.2 257 470 +
Chr2	stalkie_big_nohaplotig	CDS	18022869	18023328	.	+	1	Parent=FBgn0039537.2.mrna1;Target=FBgn0039537.2 471 930 +
Chr2	stalkie_big_nohaplotig	mRNA	18019539	18025066	.	+	.	ID=FBgn0039537.3.mrna1;geneID=FBgn0039537.3.path1;Name=FBgn0039537.3;Dir=sensecoverage=100.0;identity=91.4;matches=850;mismatches=80;indels=0;unknowns=0;locus=RLOC_00015235
Chr2	stalkie_big_nohaplotig	exon	18019539	18019630	100	+	.	Parent=FBgn0039537.3.mrna1;Target=FBgn0039537.3 1 92 +
Chr2	stalkie_big_nohaplotig	exon	18019698	18019819	100	+	.	Parent=FBgn0039537.3.mrna1;Target=FBgn0039537.3 93 214 +
Chr2	stalkie_big_nohaplotig	exon	18022493	18022534	100	+	.	Parent=FBgn0039537.3.mrna1;Target=FBgn0039537.3 215 256 +
Chr2	stalkie_big_nohaplotig	exon	18022590	18022688	96	+	.	Parent=FBgn0039537.3.mrna1;Target=FBgn0039537.3 257 355 +
Chr2	stalkie_big_nohaplotig	exon	18024427	18024541	98	+	.	Parent=FBgn0039537.3.mrna1;Target=FBgn0039537.3 356 470 +
Chr2	stalkie_big_nohaplotig	exon	18024607	18025066	83	+	.	Parent=FBgn0039537.3.mrna1;Target=FBgn0039537.3 471 930 +
Chr2	stalkie_big_nohaplotig	CDS	18019539	18019630	.	+	0	Parent=FBgn0039537.3.mrna1;Target=FBgn0039537.3 1 92 +
Chr2	stalkie_big_nohaplotig	CDS	18019698	18019819	.	+	1	Parent=FBgn0039537.3.mrna1;Target=FBgn0039537.3 93 214 +
Chr2	stalkie_big_nohaplotig	CDS	18022493	18022534	.	+	2	Parent=FBgn0039537.3.mrna1;Target=FBgn0039537.3 215 256 +
Chr2	stalkie_big_nohaplotig	CDS	18022590	18022688	.	+	2	Parent=FBgn0039537.3.mrna1;Target=FBgn0039537.3 257 355 +
Chr2	stalkie_big_nohaplotig	CDS	18024427	18024541	.	+	2	Parent=FBgn0039537.3.mrna1;Target=FBgn0039537.3 356 470 +
Chr2	stalkie_big_nohaplotig	CDS	18024607	18025066	.	+	1	Parent=FBgn0039537.3.mrna1;Target=FBgn0039537.3 471 930 +
Chr2	gffcl	locus	18026463	18028529	.	+	.	ID=RLOC_00015236;geneIDs=FBgn0033229.1.path1;transcripts=FBgn0033229.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18026463	18028529	.	+	.	ID=FBgn0033229.1.mrna1;geneID=FBgn0033229.1.path1;Name=FBgn0033229.1;Dir=sensecoverage=100.0;identity=100.0;matches=1227;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015236
Chr2	stalkie_big_nohaplotig	exon	18026463	18026626	100	+	.	Parent=FBgn0033229.1.mrna1;Target=FBgn0033229.1 1 164 +
Chr2	stalkie_big_nohaplotig	exon	18026721	18026871	100	+	.	Parent=FBgn0033229.1.mrna1;Target=FBgn0033229.1 165 315 +
Chr2	stalkie_big_nohaplotig	exon	18026929	18027202	100	+	.	Parent=FBgn0033229.1.mrna1;Target=FBgn0033229.1 316 589 +
Chr2	stalkie_big_nohaplotig	exon	18027261	18027440	100	+	.	Parent=FBgn0033229.1.mrna1;Target=FBgn0033229.1 590 769 +
Chr2	stalkie_big_nohaplotig	exon	18028072	18028529	100	+	.	Parent=FBgn0033229.1.mrna1;Target=FBgn0033229.1 770 1227 +
Chr2	stalkie_big_nohaplotig	CDS	18026463	18026626	.	+	0	Parent=FBgn0033229.1.mrna1;Target=FBgn0033229.1 1 164 +
Chr2	stalkie_big_nohaplotig	CDS	18026721	18026871	.	+	1	Parent=FBgn0033229.1.mrna1;Target=FBgn0033229.1 165 315 +
Chr2	stalkie_big_nohaplotig	CDS	18026929	18027202	.	+	0	Parent=FBgn0033229.1.mrna1;Target=FBgn0033229.1 316 589 +
Chr2	stalkie_big_nohaplotig	CDS	18027261	18027440	.	+	2	Parent=FBgn0033229.1.mrna1;Target=FBgn0033229.1 590 769 +
Chr2	stalkie_big_nohaplotig	CDS	18028072	18028529	.	+	2	Parent=FBgn0033229.1.mrna1;Target=FBgn0033229.1 770 1227 +
Chr2	gffcl	locus	18043538	18076367	.	+	.	ID=RLOC_00015237;geneIDs=FBgn0014184.1.path1;transcripts=FBgn0014184.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18043538	18076367	.	+	.	ID=FBgn0014184.1.mrna1;geneID=FBgn0014184.1.path1;Name=FBgn0014184.1;Dir=sensecoverage=100.0;identity=99.9;matches=939;mismatches=0;indels=1;unknowns=0;locus=RLOC_00015237
Chr2	stalkie_big_nohaplotig	exon	18043538	18043737	100	+	.	Parent=FBgn0014184.1.mrna1;Target=FBgn0014184.1 1 200 +
Chr2	stalkie_big_nohaplotig	exon	18075445	18075660	99	+	.	Parent=FBgn0014184.1.mrna1;Target=FBgn0014184.1 201 415 +
Chr2	stalkie_big_nohaplotig	exon	18075783	18076024	100	+	.	Parent=FBgn0014184.1.mrna1;Target=FBgn0014184.1 416 657 +
Chr2	stalkie_big_nohaplotig	exon	18076086	18076367	100	+	.	Parent=FBgn0014184.1.mrna1;Target=FBgn0014184.1 658 939 +
Chr2	stalkie_big_nohaplotig	CDS	18043538	18043737	.	+	0	Parent=FBgn0014184.1.mrna1;Target=FBgn0014184.1 1 200 +
Chr2	stalkie_big_nohaplotig	CDS	18075445	18075660	.	+	1	Parent=FBgn0014184.1.mrna1;Target=FBgn0014184.1 201 415 +
Chr2	stalkie_big_nohaplotig	CDS	18075783	18076024	.	+	1	Parent=FBgn0014184.1.mrna1;Target=FBgn0014184.1 416 657 +
Chr2	stalkie_big_nohaplotig	CDS	18076086	18076367	.	+	2	Parent=FBgn0014184.1.mrna1;Target=FBgn0014184.1 658 939 +
Chr2	gffcl	locus	18061897	18062680	.	-	.	ID=RLOC_00015238;geneIDs=comp147007_c0_seq1.path1;transcripts=comp147007_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18061897	18062680	.	-	.	ID=comp147007_c0_seq1.mrna1;geneID=comp147007_c0_seq1.path1;Name=comp147007_c0_seq1;Dir=sensecoverage=99.9;identity=99.1;matches=691;mismatches=1;indels=5;unknowns=0;Target=comp147007_c0_seq1 242 568 +;locus=RLOC_00015238
Chr2	stalkie_big_nohaplotig	exon	18061897	18061963	100	-	.	Parent=comp147007_c0_seq1.mrna1;Target=comp147007_c0_seq1 626 692 +
Chr2	stalkie_big_nohaplotig	exon	18062051	18062680	99	-	.	Parent=comp147007_c0_seq1.mrna1;Target=comp147007_c0_seq1 1 625 +
Chr2	stalkie_big_nohaplotig	CDS	18062108	18062434	.	-	0	Parent=comp147007_c0_seq1.mrna1
Chr2	gffcl	locus	18066809	18068052	.	-	.	ID=RLOC_00015239;geneIDs=comp152072_c0_seq1.path1;transcripts=comp152072_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18066809	18068052	.	-	.	ID=comp152072_c0_seq1.mrna1;geneID=comp152072_c0_seq1.path1;Name=comp152072_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=1244;mismatches=0;indels=0;unknowns=0;Target=comp152072_c0_seq1 1246 3 .;CDS_Target=comp152072_c0_seq1 1196 1068 .;locus=RLOC_00015239
Chr2	stalkie_big_nohaplotig	exon	18066809	18068052	100	-	.	Parent=comp152072_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18066859	18066987	.	-	0	Parent=comp152072_c0_seq1.mrna1
Chr2	gffcl	locus	18069454	18070553	.	+	.	ID=RLOC_00015240;geneIDs=comp160199_c2_seq1.path1;transcripts=comp160199_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18069454	18070553	.	+	.	ID=comp160199_c2_seq1.mrna1;geneID=comp160199_c2_seq1.path1;Name=comp160199_c2_seq1;Dir=indeterminatecoverage=99.5;identity=99.9;matches=1099;mismatches=1;indels=0;unknowns=0;Target=comp160199_c2_seq1 1100 1 .;CDS_Target=comp160199_c2_seq1 1099 797 .;locus=RLOC_00015240
Chr2	stalkie_big_nohaplotig	exon	18069454	18070553	99	+	.	Parent=comp160199_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18070250	18070552	.	+	0	Parent=comp160199_c2_seq1.mrna1
Chr2	gffcl	locus	18070631	18071387	.	-	.	ID=RLOC_00015241;geneIDs=comp143370_c1_seq1.path1;transcripts=comp143370_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18070631	18071387	.	-	.	ID=comp143370_c1_seq1.mrna1;geneID=comp143370_c1_seq1.path1;Name=comp143370_c1_seq1;Dir=indeterminatecoverage=100.0;identity=87.4;matches=738;mismatches=13;indels=93;unknowns=0;Target=comp143370_c1_seq1 838 1 .;CDS_Target=comp143370_c1_seq1 426 373 .;locus=RLOC_00015241
Chr2	stalkie_big_nohaplotig	exon	18070631	18071387	87	-	.	Parent=comp143370_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18071043	18071096	.	-	0	Parent=comp143370_c1_seq1.mrna1
Chr2	gffcl	locus	18074381	19031190	.	.	.	ID=RLOC_00015242;geneIDs=comp155035_c3_seq1.path1,comp162280_c1_seq1.path1;transcripts=comp155035_c3_seq1.mrna1,comp162280_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18074381	19031190	.	+	.	ID=comp155035_c3_seq1.mrna1;geneID=comp155035_c3_seq1.path1;Name=comp155035_c3_seq1;Dir=indeterminatecoverage=71.1;identity=98.9;matches=695;mismatches=8;indels=0;unknowns=0;Target=comp155035_c3_seq1 74 3 .;locus=RLOC_00015242
Chr2	stalkie_big_nohaplotig	exon	18074381	18074988	100	+	.	Parent=comp155035_c3_seq1.mrna1;Target=comp155035_c3_seq1 608 1 .
Chr2	stalkie_big_nohaplotig	exon	18960632	18960640	100	+	.	Parent=comp155035_c3_seq1.mrna1;Target=comp155035_c3_seq1 617 609 .
Chr2	stalkie_big_nohaplotig	exon	18968474	18968479	100	+	.	Parent=comp155035_c3_seq1.mrna1;Target=comp155035_c3_seq1 623 618 .
Chr2	stalkie_big_nohaplotig	exon	18980832	18980836	100	+	.	Parent=comp155035_c3_seq1.mrna1;Target=comp155035_c3_seq1 628 624 .
Chr2	stalkie_big_nohaplotig	exon	19009825	19009832	87	+	.	Parent=comp155035_c3_seq1.mrna1;Target=comp155035_c3_seq1 636 629 .
Chr2	stalkie_big_nohaplotig	exon	19012182	19012187	100	+	.	Parent=comp155035_c3_seq1.mrna1;Target=comp155035_c3_seq1 642 637 .
Chr2	stalkie_big_nohaplotig	exon	19013304	19013310	100	+	.	Parent=comp155035_c3_seq1.mrna1;Target=comp155035_c3_seq1 649 643 .
Chr2	stalkie_big_nohaplotig	exon	19016830	19016838	100	+	.	Parent=comp155035_c3_seq1.mrna1;Target=comp155035_c3_seq1 658 650 .
Chr2	stalkie_big_nohaplotig	exon	19018158	19018172	80	+	.	Parent=comp155035_c3_seq1.mrna1;Target=comp155035_c3_seq1 673 659 .
Chr2	stalkie_big_nohaplotig	exon	19019056	19019070	73	+	.	Parent=comp155035_c3_seq1.mrna1;Target=comp155035_c3_seq1 688 674 .
Chr2	stalkie_big_nohaplotig	exon	19023773	19023778	100	+	.	Parent=comp155035_c3_seq1.mrna1;Target=comp155035_c3_seq1 694 689 .
Chr2	stalkie_big_nohaplotig	exon	19031182	19031190	100	+	.	Parent=comp155035_c3_seq1.mrna1;Target=comp155035_c3_seq1 703 695 .
Chr2	stalkie_big_nohaplotig	CDS	18074383	18074454	.	+	0	Parent=comp155035_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18960620	18961303	.	-	.	ID=comp162280_c1_seq1.mrna1;geneID=comp162280_c1_seq1.path1;Name=comp162280_c1_seq1;Dir=indeterminatecoverage=98.7;identity=99.9;matches=683;mismatches=1;indels=0;unknowns=0;Target=comp162280_c1_seq1 693 10 .;CDS_Target=comp162280_c1_seq1 486 10 .;locus=RLOC_00015242
Chr2	stalkie_big_nohaplotig	exon	18960620	18961303	99	-	.	Parent=comp162280_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18960827	18961303	.	-	0	Parent=comp162280_c1_seq1.mrna1
Chr2	gffcl	locus	18077345	18077509	.	+	.	ID=RLOC_00015243;geneIDs=comp162804_c0_seq1.path2;transcripts=comp162804_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	18077345	18077509	.	+	.	ID=comp162804_c0_seq1.mrna2;geneID=comp162804_c0_seq1.path2;Name=comp162804_c0_seq1;Dir=indeterminatecoverage=3.3;identity=100.0;matches=165;mismatches=0;indels=0;unknowns=0;Target=comp162804_c0_seq1 4915 4751 .;locus=RLOC_00015243
Chr2	stalkie_big_nohaplotig	exon	18077345	18077509	100	+	.	Parent=comp162804_c0_seq1.mrna2
Chr2	gffcl	locus	18077522	18077913	.	-	.	ID=RLOC_00015244;geneIDs=comp150737_c0_seq1.path1;transcripts=comp150737_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18077522	18077913	.	-	.	ID=comp150737_c0_seq1.mrna1;geneID=comp150737_c0_seq1.path1;Name=comp150737_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=385;mismatches=7;indels=3;unknowns=0;Target=comp150737_c0_seq1 395 1 .;CDS_Target=comp150737_c0_seq1 89 3 .;locus=RLOC_00015244
Chr2	stalkie_big_nohaplotig	exon	18077522	18077913	97	-	.	Parent=comp150737_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18077825	18077911	.	-	0	Parent=comp150737_c0_seq1.mrna1
Chr2	gffcl	locus	18114894	18152396	.	+	.	ID=RLOC_00015245;geneIDs=comp152387_c0_seq1.path1;transcripts=comp152387_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18114894	18152396	.	+	.	ID=comp152387_c0_seq1.mrna1;geneID=comp152387_c0_seq1.path1;Name=comp152387_c0_seq1;Dir=indeterminatecoverage=91.3;identity=99.9;matches=677;mismatches=1;indels=0;unknowns=0;Target=comp152387_c0_seq1 631 542 .;locus=RLOC_00015245
Chr2	stalkie_big_nohaplotig	exon	18114894	18114899	100	+	.	Parent=comp152387_c0_seq1.mrna1;Target=comp152387_c0_seq1 71 66 .
Chr2	stalkie_big_nohaplotig	exon	18128326	18128334	100	+	.	Parent=comp152387_c0_seq1.mrna1;Target=comp152387_c0_seq1 80 72 .
Chr2	stalkie_big_nohaplotig	exon	18151734	18152396	99	+	.	Parent=comp152387_c0_seq1.mrna1;Target=comp152387_c0_seq1 747 85 .
Chr2	stalkie_big_nohaplotig	CDS	18152191	18152280	.	+	0	Parent=comp152387_c0_seq1.mrna1
Chr2	gffcl	locus	18152937	18158079	.	-	.	ID=RLOC_00015247;geneIDs=FBgn0033582.1.path1;transcripts=FBgn0033582.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18152937	18158079	.	-	.	ID=FBgn0033582.1.mrna1;geneID=FBgn0033582.1.path1;Name=FBgn0033582.1;Dir=sensecoverage=100.0;identity=100.0;matches=837;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015247
Chr2	stalkie_big_nohaplotig	exon	18152937	18152960	100	-	.	Parent=FBgn0033582.1.mrna1;Target=FBgn0033582.1 814 837 +
Chr2	stalkie_big_nohaplotig	exon	18155853	18155996	100	-	.	Parent=FBgn0033582.1.mrna1;Target=FBgn0033582.1 670 813 +
Chr2	stalkie_big_nohaplotig	exon	18156095	18156486	100	-	.	Parent=FBgn0033582.1.mrna1;Target=FBgn0033582.1 278 669 +
Chr2	stalkie_big_nohaplotig	exon	18157367	18157501	100	-	.	Parent=FBgn0033582.1.mrna1;Target=FBgn0033582.1 143 277 +
Chr2	stalkie_big_nohaplotig	exon	18157568	18157615	100	-	.	Parent=FBgn0033582.1.mrna1;Target=FBgn0033582.1 95 142 +
Chr2	stalkie_big_nohaplotig	exon	18157986	18158079	100	-	.	Parent=FBgn0033582.1.mrna1;Target=FBgn0033582.1 1 94 +
Chr2	stalkie_big_nohaplotig	CDS	18152937	18152960	.	-	0	Parent=FBgn0033582.1.mrna1;Target=FBgn0033582.1 814 837 +
Chr2	stalkie_big_nohaplotig	CDS	18155853	18155996	.	-	0	Parent=FBgn0033582.1.mrna1;Target=FBgn0033582.1 670 813 +
Chr2	stalkie_big_nohaplotig	CDS	18156095	18156486	.	-	2	Parent=FBgn0033582.1.mrna1;Target=FBgn0033582.1 278 669 +
Chr2	stalkie_big_nohaplotig	CDS	18157367	18157501	.	-	2	Parent=FBgn0033582.1.mrna1;Target=FBgn0033582.1 143 277 +
Chr2	stalkie_big_nohaplotig	CDS	18157568	18157615	.	-	2	Parent=FBgn0033582.1.mrna1;Target=FBgn0033582.1 95 142 +
Chr2	stalkie_big_nohaplotig	CDS	18157986	18158079	.	-	0	Parent=FBgn0033582.1.mrna1;Target=FBgn0033582.1 1 94 +
Chr2	gffcl	locus	18153259	19925294	.	-	.	ID=RLOC_00015248;geneIDs=comp163585_c3_seq1.path1;transcripts=comp163585_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18153259	19925294	.	-	.	ID=comp163585_c3_seq1.mrna1;geneID=comp163585_c3_seq1.path1;Name=comp163585_c3_seq1;Dir=antisensecoverage=74.1;identity=94.8;matches=964;mismatches=31;indels=22;unknowns=0;locus=RLOC_00015248
Chr2	stalkie_big_nohaplotig	exon	18153259	18154013	99	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 2 756 -
Chr2	stalkie_big_nohaplotig	exon	19795564	19795567	100	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 757 760 -
Chr2	stalkie_big_nohaplotig	exon	19797407	19797412	100	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 761 766 -
Chr2	stalkie_big_nohaplotig	exon	19807601	19807612	100	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 767 778 -
Chr2	stalkie_big_nohaplotig	exon	19810822	19810883	56	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 779 836 -
Chr2	stalkie_big_nohaplotig	exon	19811268	19811277	100	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 837 846 -
Chr2	stalkie_big_nohaplotig	exon	19811378	19811383	100	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 847 852 -
Chr2	stalkie_big_nohaplotig	exon	19813661	19813666	100	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 853 858 -
Chr2	stalkie_big_nohaplotig	exon	19815718	19815720	100	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 859 861 -
Chr2	stalkie_big_nohaplotig	exon	19821662	19821666	100	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 862 866 -
Chr2	stalkie_big_nohaplotig	exon	19828784	19828792	100	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 867 875 -
Chr2	stalkie_big_nohaplotig	exon	19834577	19834588	100	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 876 887 -
Chr2	stalkie_big_nohaplotig	exon	19845361	19845368	100	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 901 908 -
Chr2	stalkie_big_nohaplotig	exon	19860718	19860721	100	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 909 912 -
Chr2	stalkie_big_nohaplotig	exon	19868803	19868809	100	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 920 926 -
Chr2	stalkie_big_nohaplotig	exon	19876780	19876782	100	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 927 929 -
Chr2	stalkie_big_nohaplotig	exon	19880664	19880666	100	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 930 932 -
Chr2	stalkie_big_nohaplotig	exon	19884426	19884433	100	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 933 940 -
Chr2	stalkie_big_nohaplotig	exon	19884969	19884981	84	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 941 953 -
Chr2	stalkie_big_nohaplotig	exon	19888350	19888357	87	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 954 961 -
Chr2	stalkie_big_nohaplotig	exon	19900376	19900385	35	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 962 989 -
Chr2	stalkie_big_nohaplotig	exon	19900577	19900584	100	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 990 997 -
Chr2	stalkie_big_nohaplotig	exon	19901357	19901362	83	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 998 1003 -
Chr2	stalkie_big_nohaplotig	exon	19903692	19903699	100	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 1004 1011 -
Chr2	stalkie_big_nohaplotig	exon	19903719	19903724	100	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 1060 1065 -
Chr2	stalkie_big_nohaplotig	exon	19907377	19907385	100	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 1066 1074 -
Chr2	stalkie_big_nohaplotig	exon	19911237	19911239	100	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 1075 1077 -
Chr2	stalkie_big_nohaplotig	exon	19925291	19925294	100	-	.	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 1078 1081 -
Chr2	stalkie_big_nohaplotig	CDS	19860718	19860721	.	-	1	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 909 912 .
Chr2	stalkie_big_nohaplotig	CDS	19868803	19868809	.	-	2	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 920 926 .
Chr2	stalkie_big_nohaplotig	CDS	19876780	19876782	.	-	2	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 927 929 .
Chr2	stalkie_big_nohaplotig	CDS	19880664	19880666	.	-	2	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 930 932 .
Chr2	stalkie_big_nohaplotig	CDS	19884426	19884433	.	-	1	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 933 940 .
Chr2	stalkie_big_nohaplotig	CDS	19884969	19884981	.	-	2	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 941 953 .
Chr2	stalkie_big_nohaplotig	CDS	19888350	19888357	.	-	1	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 954 961 .
Chr2	stalkie_big_nohaplotig	CDS	19900376	19900385	.	-	2	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 962 989 .
Chr2	stalkie_big_nohaplotig	CDS	19900577	19900584	.	-	1	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 990 997 .
Chr2	stalkie_big_nohaplotig	CDS	19901357	19901362	.	-	1	Parent=comp163585_c3_seq1.mrna1;Target=comp163585_c3_seq1 998 1003 .
Chr2	gffcl	locus	18154015	18155146	.	-	.	ID=RLOC_00015249;geneIDs=comp155184_c0_seq1.path1;transcripts=comp155184_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18154015	18155146	.	-	.	ID=comp155184_c0_seq1.mrna1;geneID=comp155184_c0_seq1.path1;Name=comp155184_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.4;matches=1112;mismatches=12;indels=67;unknowns=0;Target=comp155184_c0_seq1 1183 1 .;CDS_Target=comp155184_c0_seq1 190 2 .;locus=RLOC_00015249
Chr2	stalkie_big_nohaplotig	exon	18154015	18155146	93	-	.	Parent=comp155184_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18154957	18155145	.	-	0	Parent=comp155184_c0_seq1.mrna1
Chr2	gffcl	locus	18159832	18160202	.	-	.	ID=RLOC_00015250;geneIDs=comp141791_c0_seq1.path1;transcripts=comp141791_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18159832	18160202	.	-	.	ID=comp141791_c0_seq1.mrna1;geneID=comp141791_c0_seq1.path1;Name=comp141791_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=369;mismatches=2;indels=0;unknowns=0;Target=comp141791_c0_seq1 371 1 .;CDS_Target=comp141791_c0_seq1 331 254 .;locus=RLOC_00015250
Chr2	stalkie_big_nohaplotig	exon	18159832	18160202	99	-	.	Parent=comp141791_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18159872	18159949	.	-	0	Parent=comp141791_c0_seq1.mrna1
Chr2	gffcl	locus	18160378	18162617	.	+	.	ID=RLOC_00015251;geneIDs=FBgn0037084.1.path1;transcripts=FBgn0037084.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18160378	18162617	.	+	.	ID=FBgn0037084.1.mrna1;geneID=FBgn0037084.1.path1;Name=FBgn0037084.1;Dir=sensecoverage=100.0;identity=100.0;matches=936;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015251
Chr2	stalkie_big_nohaplotig	exon	18160378	18160418	100	+	.	Parent=FBgn0037084.1.mrna1;Target=FBgn0037084.1 1 41 +
Chr2	stalkie_big_nohaplotig	exon	18160514	18160674	100	+	.	Parent=FBgn0037084.1.mrna1;Target=FBgn0037084.1 42 202 +
Chr2	stalkie_big_nohaplotig	exon	18161141	18161705	100	+	.	Parent=FBgn0037084.1.mrna1;Target=FBgn0037084.1 203 767 +
Chr2	stalkie_big_nohaplotig	exon	18162375	18162469	100	+	.	Parent=FBgn0037084.1.mrna1;Target=FBgn0037084.1 768 862 +
Chr2	stalkie_big_nohaplotig	exon	18162544	18162617	100	+	.	Parent=FBgn0037084.1.mrna1;Target=FBgn0037084.1 863 936 +
Chr2	stalkie_big_nohaplotig	CDS	18160378	18160418	.	+	0	Parent=FBgn0037084.1.mrna1;Target=FBgn0037084.1 1 41 +
Chr2	stalkie_big_nohaplotig	CDS	18160514	18160674	.	+	1	Parent=FBgn0037084.1.mrna1;Target=FBgn0037084.1 42 202 +
Chr2	stalkie_big_nohaplotig	CDS	18161141	18161705	.	+	2	Parent=FBgn0037084.1.mrna1;Target=FBgn0037084.1 203 767 +
Chr2	stalkie_big_nohaplotig	CDS	18162375	18162469	.	+	1	Parent=FBgn0037084.1.mrna1;Target=FBgn0037084.1 768 862 +
Chr2	stalkie_big_nohaplotig	CDS	18162544	18162617	.	+	2	Parent=FBgn0037084.1.mrna1;Target=FBgn0037084.1 863 936 +
Chr2	gffcl	locus	18165584	18167409	.	+	.	ID=RLOC_00015252;geneIDs=FBgn0003082.1.path2;transcripts=FBgn0003082.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	18165584	18167409	.	+	.	ID=FBgn0003082.1.mrna2;geneID=FBgn0003082.1.path2;Name=FBgn0003082.1;Dir=sensecoverage=100.0;identity=100.0;matches=1656;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015252
Chr2	stalkie_big_nohaplotig	exon	18165584	18165648	100	+	.	Parent=FBgn0003082.1.mrna2;Target=FBgn0003082.1 1 65 +
Chr2	stalkie_big_nohaplotig	exon	18165703	18166700	100	+	.	Parent=FBgn0003082.1.mrna2;Target=FBgn0003082.1 66 1063 +
Chr2	stalkie_big_nohaplotig	exon	18166761	18167195	100	+	.	Parent=FBgn0003082.1.mrna2;Target=FBgn0003082.1 1064 1498 +
Chr2	stalkie_big_nohaplotig	exon	18167252	18167409	100	+	.	Parent=FBgn0003082.1.mrna2;Target=FBgn0003082.1 1499 1656 +
Chr2	stalkie_big_nohaplotig	CDS	18165584	18165648	.	+	0	Parent=FBgn0003082.1.mrna2;Target=FBgn0003082.1 1 65 +
Chr2	stalkie_big_nohaplotig	CDS	18165703	18166700	.	+	1	Parent=FBgn0003082.1.mrna2;Target=FBgn0003082.1 66 1063 +
Chr2	stalkie_big_nohaplotig	CDS	18166761	18167195	.	+	2	Parent=FBgn0003082.1.mrna2;Target=FBgn0003082.1 1064 1498 +
Chr2	stalkie_big_nohaplotig	CDS	18167252	18167409	.	+	2	Parent=FBgn0003082.1.mrna2;Target=FBgn0003082.1 1499 1656 +
Chr2	gffcl	locus	18167578	18168575	.	-	.	ID=RLOC_00015253;geneIDs=FBgn0263121.1.path2;transcripts=FBgn0263121.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	18167578	18168575	.	-	.	ID=FBgn0263121.1.mrna2;geneID=FBgn0263121.1.path2;Name=FBgn0263121.1;Dir=sensecoverage=100.0;identity=100.0;matches=744;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015253
Chr2	stalkie_big_nohaplotig	exon	18167578	18167900	100	-	.	Parent=FBgn0263121.1.mrna2;Target=FBgn0263121.1 422 744 +
Chr2	stalkie_big_nohaplotig	exon	18167961	18168116	100	-	.	Parent=FBgn0263121.1.mrna2;Target=FBgn0263121.1 266 421 +
Chr2	stalkie_big_nohaplotig	exon	18168174	18168350	100	-	.	Parent=FBgn0263121.1.mrna2;Target=FBgn0263121.1 89 265 +
Chr2	stalkie_big_nohaplotig	exon	18168488	18168575	100	-	.	Parent=FBgn0263121.1.mrna2;Target=FBgn0263121.1 1 88 +
Chr2	stalkie_big_nohaplotig	CDS	18167578	18167900	.	-	2	Parent=FBgn0263121.1.mrna2;Target=FBgn0263121.1 422 744 +
Chr2	stalkie_big_nohaplotig	CDS	18167961	18168116	.	-	2	Parent=FBgn0263121.1.mrna2;Target=FBgn0263121.1 266 421 +
Chr2	stalkie_big_nohaplotig	CDS	18168174	18168350	.	-	2	Parent=FBgn0263121.1.mrna2;Target=FBgn0263121.1 89 265 +
Chr2	stalkie_big_nohaplotig	CDS	18168488	18168575	.	-	0	Parent=FBgn0263121.1.mrna2;Target=FBgn0263121.1 1 88 +
Chr2	gffcl	locus	18178995	18181868	.	+	.	ID=RLOC_00015254;geneIDs=CPIJ007189.1.path1;transcripts=CPIJ007189.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18178995	18181868	.	+	.	ID=CPIJ007189.1.mrna1;geneID=CPIJ007189.1.path1;Name=CPIJ007189.1;Dir=sensecoverage=100.0;identity=100.0;matches=993;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015254
Chr2	stalkie_big_nohaplotig	exon	18178995	18179704	100	+	.	Parent=CPIJ007189.1.mrna1;Target=CPIJ007189.1 1 710 +
Chr2	stalkie_big_nohaplotig	exon	18181447	18181610	100	+	.	Parent=CPIJ007189.1.mrna1;Target=CPIJ007189.1 711 874 +
Chr2	stalkie_big_nohaplotig	exon	18181750	18181868	100	+	.	Parent=CPIJ007189.1.mrna1;Target=CPIJ007189.1 875 993 +
Chr2	stalkie_big_nohaplotig	CDS	18178995	18179704	.	+	0	Parent=CPIJ007189.1.mrna1;Target=CPIJ007189.1 1 710 +
Chr2	stalkie_big_nohaplotig	CDS	18181447	18181610	.	+	1	Parent=CPIJ007189.1.mrna1;Target=CPIJ007189.1 711 874 +
Chr2	stalkie_big_nohaplotig	CDS	18181750	18181868	.	+	2	Parent=CPIJ007189.1.mrna1;Target=CPIJ007189.1 875 993 +
Chr2	gffcl	locus	18188441	18191136	.	+	.	ID=RLOC_00015255;geneIDs=FBgn0022960.1.path1;transcripts=FBgn0022960.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18188441	18191136	.	+	.	ID=FBgn0022960.1.mrna1;geneID=FBgn0022960.1.path1;Name=FBgn0022960.1;Dir=sensecoverage=96.7;identity=100.0;matches=1904;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015255
Chr2	stalkie_big_nohaplotig	exon	18188441	18189355	100	+	.	Parent=FBgn0022960.1.mrna1;Target=FBgn0022960.1 65 979 +
Chr2	stalkie_big_nohaplotig	exon	18189412	18189798	100	+	.	Parent=FBgn0022960.1.mrna1;Target=FBgn0022960.1 980 1366 +
Chr2	stalkie_big_nohaplotig	exon	18190535	18191136	100	+	.	Parent=FBgn0022960.1.mrna1;Target=FBgn0022960.1 1367 1968 +
Chr2	stalkie_big_nohaplotig	CDS	18188443	18189355	.	+	0	Parent=FBgn0022960.1.mrna1;Target=FBgn0022960.1 67 979 +
Chr2	stalkie_big_nohaplotig	CDS	18189412	18189798	.	+	2	Parent=FBgn0022960.1.mrna1;Target=FBgn0022960.1 980 1366 +
Chr2	stalkie_big_nohaplotig	CDS	18190535	18191136	.	+	2	Parent=FBgn0022960.1.mrna1;Target=FBgn0022960.1 1367 1968 +
Chr2	gffcl	locus	18191810	18192385	.	-	.	ID=RLOC_00015256;geneIDs=comp151694_c0_seq1.path1;transcripts=comp151694_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18191810	18192385	.	-	.	ID=comp151694_c0_seq1.mrna1;geneID=comp151694_c0_seq1.path1;Name=comp151694_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=575;mismatches=1;indels=0;unknowns=0;Target=comp151694_c0_seq1 576 1 .;CDS_Target=comp151694_c0_seq1 114 1 .;locus=RLOC_00015256
Chr2	stalkie_big_nohaplotig	exon	18191810	18192385	99	-	.	Parent=comp151694_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18192272	18192385	.	-	0	Parent=comp151694_c0_seq1.mrna1
Chr2	gffcl	locus	18205279	18211594	.	+	.	ID=RLOC_00015257;geneIDs=FBgn0033460.1.path1;transcripts=FBgn0033460.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18205279	18211594	.	+	.	ID=FBgn0033460.1.mrna1;geneID=FBgn0033460.1.path1;Name=FBgn0033460.1;Dir=sensecoverage=100.0;identity=100.0;matches=3837;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015257
Chr2	stalkie_big_nohaplotig	exon	18205279	18206073	100	+	.	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 1 795 +
Chr2	stalkie_big_nohaplotig	exon	18206133	18207037	100	+	.	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 796 1700 +
Chr2	stalkie_big_nohaplotig	exon	18207121	18207223	100	+	.	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 1701 1803 +
Chr2	stalkie_big_nohaplotig	exon	18207288	18207414	100	+	.	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 1804 1930 +
Chr2	stalkie_big_nohaplotig	exon	18207495	18207604	100	+	.	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 1931 2040 +
Chr2	stalkie_big_nohaplotig	exon	18207665	18207896	100	+	.	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 2041 2272 +
Chr2	stalkie_big_nohaplotig	exon	18207963	18208120	100	+	.	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 2273 2430 +
Chr2	stalkie_big_nohaplotig	exon	18209014	18209239	100	+	.	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 2431 2656 +
Chr2	stalkie_big_nohaplotig	exon	18209310	18209563	100	+	.	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 2657 2910 +
Chr2	stalkie_big_nohaplotig	exon	18209632	18210000	100	+	.	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 2911 3279 +
Chr2	stalkie_big_nohaplotig	exon	18210077	18210288	100	+	.	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 3280 3491 +
Chr2	stalkie_big_nohaplotig	exon	18210354	18210451	100	+	.	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 3492 3589 +
Chr2	stalkie_big_nohaplotig	exon	18211182	18211320	100	+	.	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 3590 3728 +
Chr2	stalkie_big_nohaplotig	exon	18211486	18211594	100	+	.	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 3729 3837 +
Chr2	stalkie_big_nohaplotig	CDS	18205279	18206073	.	+	0	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 1 795 +
Chr2	stalkie_big_nohaplotig	CDS	18206133	18207037	.	+	0	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 796 1700 +
Chr2	stalkie_big_nohaplotig	CDS	18207121	18207223	.	+	1	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 1701 1803 +
Chr2	stalkie_big_nohaplotig	CDS	18207288	18207414	.	+	0	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 1804 1930 +
Chr2	stalkie_big_nohaplotig	CDS	18207495	18207604	.	+	2	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 1931 2040 +
Chr2	stalkie_big_nohaplotig	CDS	18207665	18207896	.	+	0	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 2041 2272 +
Chr2	stalkie_big_nohaplotig	CDS	18207963	18208120	.	+	2	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 2273 2430 +
Chr2	stalkie_big_nohaplotig	CDS	18209014	18209239	.	+	0	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 2431 2656 +
Chr2	stalkie_big_nohaplotig	CDS	18209310	18209563	.	+	2	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 2657 2910 +
Chr2	stalkie_big_nohaplotig	CDS	18209632	18210000	.	+	0	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 2911 3279 +
Chr2	stalkie_big_nohaplotig	CDS	18210077	18210288	.	+	0	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 3280 3491 +
Chr2	stalkie_big_nohaplotig	CDS	18210354	18210451	.	+	1	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 3492 3589 +
Chr2	stalkie_big_nohaplotig	CDS	18211182	18211320	.	+	2	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 3590 3728 +
Chr2	stalkie_big_nohaplotig	CDS	18211486	18211594	.	+	1	Parent=FBgn0033460.1.mrna1;Target=FBgn0033460.1 3729 3837 +
Chr2	gffcl	locus	18211915	18212777	.	+	.	ID=RLOC_00015258;geneIDs=comp144971_c0_seq1.path1;transcripts=comp144971_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18211915	18212777	.	+	.	ID=comp144971_c0_seq1.mrna1;geneID=comp144971_c0_seq1.path1;Name=comp144971_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=863;mismatches=0;indels=2;unknowns=0;Target=comp144971_c0_seq1 867 3 .;CDS_Target=comp144971_c0_seq1 88 5 .;locus=RLOC_00015258
Chr2	stalkie_big_nohaplotig	exon	18211915	18212777	99	+	.	Parent=comp144971_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18211917	18212000	.	+	0	Parent=comp144971_c0_seq1.mrna1
Chr2	gffcl	locus	18215290	18216186	.	-	.	ID=RLOC_00015259;geneIDs=comp143149_c0_seq1.path1;transcripts=comp143149_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18215290	18216186	.	-	.	ID=comp143149_c0_seq1.mrna1;geneID=comp143149_c0_seq1.path1;Name=comp143149_c0_seq1;Dir=antisensecoverage=97.4;identity=99.8;matches=835;mismatches=1;indels=1;unknowns=0;Target=comp143149_c0_seq1 486 764 .;locus=RLOC_00015259
Chr2	stalkie_big_nohaplotig	exon	18215290	18215613	100	-	.	Parent=comp143149_c0_seq1.mrna1;Target=comp143149_c0_seq1 23 346 -
Chr2	stalkie_big_nohaplotig	exon	18215675	18216186	99	-	.	Parent=comp143149_c0_seq1.mrna1;Target=comp143149_c0_seq1 347 859 -
Chr2	stalkie_big_nohaplotig	CDS	18215813	18216091	.	-	0	Parent=comp143149_c0_seq1.mrna1
Chr2	gffcl	locus	18226734	18227070	.	-	.	ID=RLOC_00015261;geneIDs=comp156404_c0_seq1.path1;transcripts=comp156404_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18226734	18227070	.	-	.	ID=comp156404_c0_seq1.mrna1;geneID=comp156404_c0_seq1.path1;Name=comp156404_c0_seq1;Dir=indeterminatecoverage=36.4;identity=100.0;matches=337;mismatches=0;indels=0;unknowns=0;Target=comp156404_c0_seq1 337 1 .;CDS_Target=comp156404_c0_seq1 60 1 .;locus=RLOC_00015261
Chr2	stalkie_big_nohaplotig	exon	18226734	18227070	100	-	.	Parent=comp156404_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18227011	18227070	.	-	0	Parent=comp156404_c0_seq1.mrna1
Chr2	gffcl	locus	18356212	18357474	.	+	.	ID=RLOC_00015265;geneIDs=FBgn0032513.2.path1;transcripts=FBgn0032513.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18356212	18357474	.	+	.	ID=FBgn0032513.2.mrna1;geneID=FBgn0032513.2.path1;Name=FBgn0032513.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1263;mismatches=0;indels=0;unknowns=0;Target=FBgn0032513.2 1263 1 .;locus=RLOC_00015265
Chr2	stalkie_big_nohaplotig	exon	18356212	18357474	100	+	.	Parent=FBgn0032513.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18356212	18357474	.	+	0	Parent=FBgn0032513.2.mrna1
Chr2	gffcl	locus	18406239	18406727	.	+	.	ID=RLOC_00015267;geneIDs=comp118057_c0_seq1.path1;transcripts=comp118057_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18406239	18406727	.	+	.	ID=comp118057_c0_seq1.mrna1;geneID=comp118057_c0_seq1.path1;Name=comp118057_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=485;mismatches=4;indels=7;unknowns=0;Target=comp118057_c0_seq1 496 1 .;CDS_Target=comp118057_c0_seq1 125 3 .;locus=RLOC_00015267
Chr2	stalkie_big_nohaplotig	exon	18406239	18406727	97	+	.	Parent=comp118057_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18406241	18406356	.	+	0	Parent=comp118057_c0_seq1.mrna1
Chr2	gffcl	locus	18416986	18417521	.	-	.	ID=RLOC_00015268;geneIDs=comp103635_c0_seq1.path1;transcripts=comp103635_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18416986	18417521	.	-	.	ID=comp103635_c0_seq1.mrna1;geneID=comp103635_c0_seq1.path1;Name=comp103635_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=531;mismatches=5;indels=0;unknowns=0;Target=comp103635_c0_seq1 536 1 .;CDS_Target=comp103635_c0_seq1 318 187 .;locus=RLOC_00015268
Chr2	stalkie_big_nohaplotig	exon	18416986	18417521	99	-	.	Parent=comp103635_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18417204	18417335	.	-	0	Parent=comp103635_c0_seq1.mrna1
Chr2	gffcl	locus	18417603	18418513	.	+	.	ID=RLOC_00015269;geneIDs=comp153039_c0_seq1.path1;transcripts=comp153039_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18417603	18418513	.	+	.	ID=comp153039_c0_seq1.mrna1;geneID=comp153039_c0_seq1.path1;Name=comp153039_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.8;matches=853;mismatches=13;indels=53;unknowns=0;Target=comp153039_c0_seq1 874 1 .;CDS_Target=comp153039_c0_seq1 219 193 .;locus=RLOC_00015269
Chr2	stalkie_big_nohaplotig	exon	18417603	18418513	92	+	.	Parent=comp153039_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18417795	18417813	.	+	0	Parent=comp153039_c0_seq1.mrna1
Chr2	gffcl	locus	18418584	18420075	.	.	.	ID=RLOC_00015270;geneIDs=comp135345_c0_seq1.path1,comp135453_c0_seq1.path1;transcripts=comp135453_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18418584	18419704	.	-	.	ID=comp135453_c0_seq1.mrna1;geneID=comp135453_c0_seq1.path1;Name=comp135453_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=1110;mismatches=9;indels=16;unknowns=0;Target=comp135453_c0_seq1 1133 1 .;CDS_Target=comp135453_c0_seq1 895 719 .;locus=RLOC_00015270
Chr2	stalkie_big_nohaplotig	exon	18418584	18419704	97	-	.	Parent=comp135453_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18418823	18418999	.	-	0	Parent=comp135453_c0_seq1.mrna1
Chr2	gffcl	locus	18424177	18425532	.	+	.	ID=RLOC_00015271;geneIDs=comp149469_c0_seq1.path1;transcripts=comp149469_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18424177	18425532	.	+	.	ID=comp149469_c0_seq1.mrna1;geneID=comp149469_c0_seq1.path1;Name=comp149469_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.9;matches=1356;mismatches=0;indels=1;unknowns=0;Target=comp149469_c0_seq1 1357 1 .;CDS_Target=comp149469_c0_seq1 1206 1084 .;locus=RLOC_00015271
Chr2	stalkie_big_nohaplotig	exon	18424177	18425532	99	+	.	Parent=comp149469_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18425259	18425381	.	+	0	Parent=comp149469_c0_seq1.mrna1
Chr2	gffcl	locus	18425590	18426147	.	-	.	ID=RLOC_00015272;geneIDs=comp53760_c0_seq1.path1;transcripts=comp53760_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18425590	18426147	.	-	.	ID=comp53760_c0_seq1.mrna1;geneID=comp53760_c0_seq1.path1;Name=comp53760_c0_seq1;Dir=indeterminatecoverage=96.5;identity=100.0;matches=558;mismatches=0;indels=0;unknowns=0;Target=comp53760_c0_seq1 558 1 .;CDS_Target=comp53760_c0_seq1 275 180 .;locus=RLOC_00015272
Chr2	stalkie_big_nohaplotig	exon	18425590	18426147	100	-	.	Parent=comp53760_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18425873	18425968	.	-	0	Parent=comp53760_c0_seq1.mrna1
Chr2	gffcl	locus	18428010	18428252	.	-	.	ID=RLOC_00015273;geneIDs=comp120252_c0_seq1.path1;transcripts=comp120252_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18428010	18428252	.	-	.	ID=comp120252_c0_seq1.mrna1;geneID=comp120252_c0_seq1.path1;Name=comp120252_c0_seq1;Dir=indeterminatecoverage=98.4;identity=98.8;matches=240;mismatches=3;indels=0;unknowns=0;Target=comp120252_c0_seq1 244 2 .;CDS_Target=comp120252_c0_seq1 133 2 .;locus=RLOC_00015273
Chr2	stalkie_big_nohaplotig	exon	18428010	18428252	98	-	.	Parent=comp120252_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18428121	18428252	.	-	0	Parent=comp120252_c0_seq1.mrna1
Chr2	gffcl	locus	18429972	18432060	.	-	.	ID=RLOC_00015274;geneIDs=comp144831_c0_seq1.path1;transcripts=comp144831_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18429972	18432060	.	-	.	ID=comp144831_c0_seq1.mrna1;geneID=comp144831_c0_seq1.path1;Name=comp144831_c0_seq1;Dir=antisensecoverage=97.9;identity=99.4;matches=1109;mismatches=1;indels=6;unknowns=0;locus=RLOC_00015274
Chr2	stalkie_big_nohaplotig	exon	18429972	18430616	98	-	.	Parent=comp144831_c0_seq1.mrna1;Target=comp144831_c0_seq1 11 661 -
Chr2	stalkie_big_nohaplotig	exon	18431525	18431614	100	-	.	Parent=comp144831_c0_seq1.mrna1;Target=comp144831_c0_seq1 662 751 -
Chr2	stalkie_big_nohaplotig	exon	18431686	18432060	100	-	.	Parent=comp144831_c0_seq1.mrna1;Target=comp144831_c0_seq1 752 1126 -
Chr2	stalkie_big_nohaplotig	CDS	18430048	18430616	.	-	2	Parent=comp144831_c0_seq1.mrna1;Target=comp144831_c0_seq1 87 661 .
Chr2	stalkie_big_nohaplotig	CDS	18431525	18431614	.	-	2	Parent=comp144831_c0_seq1.mrna1;Target=comp144831_c0_seq1 662 751 .
Chr2	stalkie_big_nohaplotig	CDS	18431686	18431722	.	-	0	Parent=comp144831_c0_seq1.mrna1;Target=comp144831_c0_seq1 752 788 .
Chr2	gffcl	locus	18433047	18433671	.	-	.	ID=RLOC_00015275;geneIDs=comp151070_c0_seq1.path1;transcripts=comp151070_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18433047	18433671	.	-	.	ID=comp151070_c0_seq1.mrna1;geneID=comp151070_c0_seq1.path1;Name=comp151070_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=625;mismatches=0;indels=0;unknowns=0;Target=comp151070_c0_seq1 625 1 .;CDS_Target=comp151070_c0_seq1 537 211 .;locus=RLOC_00015275
Chr2	stalkie_big_nohaplotig	exon	18433047	18433671	100	-	.	Parent=comp151070_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18433135	18433461	.	-	0	Parent=comp151070_c0_seq1.mrna1
Chr2	gffcl	locus	18434913	18435414	.	-	.	ID=RLOC_00015276;geneIDs=FBgn0033507.1.path1;transcripts=FBgn0033507.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18434913	18435414	.	-	.	ID=FBgn0033507.1.mrna1;geneID=FBgn0033507.1.path1;Name=FBgn0033507.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=502;mismatches=0;indels=2;unknowns=0;Target=FBgn0033507.1 504 1 .;CDS_Target=FBgn0033507.1 41 3 .;locus=RLOC_00015276
Chr2	stalkie_big_nohaplotig	exon	18434913	18435414	99	-	.	Parent=FBgn0033507.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18435375	18435412	.	-	0	Parent=FBgn0033507.1.mrna1
Chr2	gffcl	locus	18440000	18440286	.	-	.	ID=RLOC_00015278;geneIDs=comp147451_c0_seq1.path1;transcripts=comp147451_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18440000	18440286	.	-	.	ID=comp147451_c0_seq1.mrna1;geneID=comp147451_c0_seq1.path1;Name=comp147451_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.5;matches=277;mismatches=10;indels=0;unknowns=0;Target=comp147451_c0_seq1 287 1 .;CDS_Target=comp147451_c0_seq1 285 199 .;locus=RLOC_00015278
Chr2	stalkie_big_nohaplotig	exon	18440000	18440286	96	-	.	Parent=comp147451_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18440002	18440088	.	-	0	Parent=comp147451_c0_seq1.mrna1
Chr2	gffcl	locus	18507817	18510050	.	-	.	ID=RLOC_00015282;geneIDs=comp162213_c0_seq1.path1;transcripts=comp162213_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18507817	18510050	.	-	.	ID=comp162213_c0_seq1.mrna1;geneID=comp162213_c0_seq1.path1;Name=comp162213_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.0;matches=2217;mismatches=17;indels=5;unknowns=0;Target=comp162213_c0_seq1 2244 6 .;CDS_Target=comp162213_c0_seq1 2243 2076 .;locus=RLOC_00015282
Chr2	stalkie_big_nohaplotig	exon	18507817	18510050	99	-	.	Parent=comp162213_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18507818	18507985	.	-	0	Parent=comp162213_c0_seq1.mrna1
Chr2	gffcl	locus	18513860	18514312	.	-	.	ID=RLOC_00015283;geneIDs=FBgn0033608.1.path1;transcripts=FBgn0033608.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18513860	18514312	.	-	.	ID=FBgn0033608.1.mrna1;geneID=FBgn0033608.1.path1;Name=FBgn0033608.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=453;mismatches=0;indels=0;unknowns=0;Target=FBgn0033608.1 453 1 .;locus=RLOC_00015283
Chr2	stalkie_big_nohaplotig	exon	18513860	18514312	100	-	.	Parent=FBgn0033608.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18513860	18514312	.	-	0	Parent=FBgn0033608.1.mrna1
Chr2	gffcl	locus	18516332	18518243	.	-	.	ID=RLOC_00015284;geneIDs=FBgn0015582.1.path1;transcripts=FBgn0015582.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18516332	18518243	.	-	.	ID=FBgn0015582.1.mrna1;geneID=FBgn0015582.1.path1;Name=FBgn0015582.1;Dir=sensecoverage=100.0;identity=99.5;matches=1447;mismatches=8;indels=0;unknowns=0;locus=RLOC_00015284
Chr2	stalkie_big_nohaplotig	exon	18516332	18516654	99	-	.	Parent=FBgn0015582.1.mrna1;Target=FBgn0015582.1 1133 1455 +
Chr2	stalkie_big_nohaplotig	exon	18516710	18517033	98	-	.	Parent=FBgn0015582.1.mrna1;Target=FBgn0015582.1 809 1132 +
Chr2	stalkie_big_nohaplotig	exon	18517095	18517266	100	-	.	Parent=FBgn0015582.1.mrna1;Target=FBgn0015582.1 637 808 +
Chr2	stalkie_big_nohaplotig	exon	18517327	18517699	99	-	.	Parent=FBgn0015582.1.mrna1;Target=FBgn0015582.1 264 636 +
Chr2	stalkie_big_nohaplotig	exon	18517981	18518243	100	-	.	Parent=FBgn0015582.1.mrna1;Target=FBgn0015582.1 1 263 +
Chr2	stalkie_big_nohaplotig	CDS	18516332	18516654	.	-	2	Parent=FBgn0015582.1.mrna1;Target=FBgn0015582.1 1133 1455 +
Chr2	stalkie_big_nohaplotig	CDS	18516710	18517033	.	-	2	Parent=FBgn0015582.1.mrna1;Target=FBgn0015582.1 809 1132 +
Chr2	stalkie_big_nohaplotig	CDS	18517095	18517266	.	-	0	Parent=FBgn0015582.1.mrna1;Target=FBgn0015582.1 637 808 +
Chr2	stalkie_big_nohaplotig	CDS	18517327	18517699	.	-	1	Parent=FBgn0015582.1.mrna1;Target=FBgn0015582.1 264 636 +
Chr2	stalkie_big_nohaplotig	CDS	18517981	18518243	.	-	0	Parent=FBgn0015582.1.mrna1;Target=FBgn0015582.1 1 263 +
Chr2	gffcl	locus	18520999	18529619	.	+	.	ID=RLOC_00015285;geneIDs=FBgn0039140.3.path1,comp151269_c1_seq1.path1;transcripts=FBgn0039140.3.mrna1,comp151269_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18520999	18529619	.	+	.	ID=FBgn0039140.3.mrna1;geneID=FBgn0039140.3.path1;Name=FBgn0039140.3;Dir=sensecoverage=100.0;identity=99.7;matches=1987;mismatches=5;indels=0;unknowns=0;locus=RLOC_00015285
Chr2	stalkie_big_nohaplotig	exon	18520999	18521227	99	+	.	Parent=FBgn0039140.3.mrna1;Target=FBgn0039140.3 1 229 +
Chr2	stalkie_big_nohaplotig	exon	18521301	18521512	99	+	.	Parent=FBgn0039140.3.mrna1;Target=FBgn0039140.3 230 441 +
Chr2	stalkie_big_nohaplotig	exon	18521576	18521728	100	+	.	Parent=FBgn0039140.3.mrna1;Target=FBgn0039140.3 442 594 +
Chr2	stalkie_big_nohaplotig	exon	18521793	18522644	99	+	.	Parent=FBgn0039140.3.mrna1;Target=FBgn0039140.3 595 1446 +
Chr2	stalkie_big_nohaplotig	exon	18522714	18523063	100	+	.	Parent=FBgn0039140.3.mrna1;Target=FBgn0039140.3 1447 1796 +
Chr2	stalkie_big_nohaplotig	exon	18526289	18526351	100	+	.	Parent=FBgn0039140.3.mrna1;Target=FBgn0039140.3 1797 1859 +
Chr2	stalkie_big_nohaplotig	exon	18529487	18529619	100	+	.	Parent=FBgn0039140.3.mrna1;Target=FBgn0039140.3 1860 1992 +
Chr2	stalkie_big_nohaplotig	CDS	18520999	18521227	.	+	0	Parent=FBgn0039140.3.mrna1;Target=FBgn0039140.3 1 229 +
Chr2	stalkie_big_nohaplotig	CDS	18521301	18521512	.	+	2	Parent=FBgn0039140.3.mrna1;Target=FBgn0039140.3 230 441 +
Chr2	stalkie_big_nohaplotig	CDS	18521576	18521728	.	+	0	Parent=FBgn0039140.3.mrna1;Target=FBgn0039140.3 442 594 +
Chr2	stalkie_big_nohaplotig	CDS	18521793	18522644	.	+	0	Parent=FBgn0039140.3.mrna1;Target=FBgn0039140.3 595 1446 +
Chr2	stalkie_big_nohaplotig	CDS	18522714	18523063	.	+	0	Parent=FBgn0039140.3.mrna1;Target=FBgn0039140.3 1447 1796 +
Chr2	stalkie_big_nohaplotig	CDS	18526289	18526351	.	+	1	Parent=FBgn0039140.3.mrna1;Target=FBgn0039140.3 1797 1859 +
Chr2	stalkie_big_nohaplotig	CDS	18529487	18529619	.	+	1	Parent=FBgn0039140.3.mrna1;Target=FBgn0039140.3 1860 1992 +
Chr2	stalkie_big_nohaplotig	mRNA	18528993	18529508	.	+	.	ID=comp151269_c1_seq1.mrna1;geneID=comp151269_c1_seq1.path1;Name=comp151269_c1_seq1;Dir=indeterminatecoverage=99.8;identity=98.8;matches=510;mismatches=6;indels=0;unknowns=0;Target=comp151269_c1_seq1 517 2 .;CDS_Target=comp151269_c1_seq1 69 4 .;locus=RLOC_00015285
Chr2	stalkie_big_nohaplotig	exon	18528993	18529508	98	+	.	Parent=comp151269_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18528995	18529060	.	+	0	Parent=comp151269_c1_seq1.mrna1
Chr2	gffcl	locus	18523501	18525072	.	+	.	ID=RLOC_00015286;geneIDs=comp159332_c0_seq1.path1;transcripts=comp159332_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18523501	18525072	.	+	.	ID=comp159332_c0_seq1.mrna1;geneID=comp159332_c0_seq1.path1;Name=comp159332_c0_seq1;Dir=indeterminatecoverage=100.0;identity=88.5;matches=1408;mismatches=80;indels=103;unknowns=0;Target=comp159332_c0_seq1 174 25 .;locus=RLOC_00015286
Chr2	stalkie_big_nohaplotig	exon	18523501	18523770	77	+	.	Parent=comp159332_c0_seq1.mrna1;Target=comp159332_c0_seq1 335 1 .
Chr2	stalkie_big_nohaplotig	exon	18523842	18525072	91	+	.	Parent=comp159332_c0_seq1.mrna1;Target=comp159332_c0_seq1 1602 360 .
Chr2	stalkie_big_nohaplotig	CDS	18523525	18523662	.	+	0	Parent=comp159332_c0_seq1.mrna1
Chr2	gffcl	locus	18526827	18527514	.	+	.	ID=RLOC_00015287;geneIDs=comp147985_c0_seq1.path1;transcripts=comp147985_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18526827	18527514	.	+	.	ID=comp147985_c0_seq1.mrna1;geneID=comp147985_c0_seq1.path1;Name=comp147985_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.3;matches=631;mismatches=27;indels=41;unknowns=0;Target=comp147985_c0_seq1 669 1 .;CDS_Target=comp147985_c0_seq1 530 471 .;locus=RLOC_00015287
Chr2	stalkie_big_nohaplotig	exon	18526827	18527514	90	+	.	Parent=comp147985_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18527316	18527375	.	+	0	Parent=comp147985_c0_seq1.mrna1
Chr2	gffcl	locus	18527841	18528302	.	+	.	ID=RLOC_00015288;geneIDs=comp136002_c0_seq1.path1;transcripts=comp136002_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18527841	18528302	.	+	.	ID=comp136002_c0_seq1.mrna1;geneID=comp136002_c0_seq1.path1;Name=comp136002_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=459;mismatches=1;indels=2;unknowns=0;Target=comp136002_c0_seq1 460 1 .;CDS_Target=comp136002_c0_seq1 49 2 .;locus=RLOC_00015288
Chr2	stalkie_big_nohaplotig	exon	18527841	18528302	99	+	.	Parent=comp136002_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18527842	18527889	.	+	0	Parent=comp136002_c0_seq1.mrna1
Chr2	gffcl	locus	18533036	18535053	.	+	.	ID=RLOC_00015289;geneIDs=FBgn0039140.2.path1;transcripts=FBgn0039140.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18533036	18535053	.	+	.	ID=FBgn0039140.2.mrna1;geneID=FBgn0039140.2.path1;Name=FBgn0039140.2;Dir=sensecoverage=100.0;identity=99.3;matches=1640;mismatches=10;indels=1;unknowns=2;Target=FBgn0039140.2 3 107 +;locus=RLOC_00015289
Chr2	stalkie_big_nohaplotig	exon	18533036	18533311	99	+	.	Parent=FBgn0039140.2.mrna1;Target=FBgn0039140.2 1 277 +
Chr2	stalkie_big_nohaplotig	exon	18533390	18533598	100	+	.	Parent=FBgn0039140.2.mrna1;Target=FBgn0039140.2 278 486 +
Chr2	stalkie_big_nohaplotig	exon	18533658	18533807	100	+	.	Parent=FBgn0039140.2.mrna1;Target=FBgn0039140.2 487 636 +
Chr2	stalkie_big_nohaplotig	exon	18533871	18534628	99	+	.	Parent=FBgn0039140.2.mrna1;Target=FBgn0039140.2 637 1394 +
Chr2	stalkie_big_nohaplotig	exon	18534728	18534818	98	+	.	Parent=FBgn0039140.2.mrna1;Target=FBgn0039140.2 1395 1485 +
Chr2	stalkie_big_nohaplotig	exon	18534886	18535053	98	+	.	Parent=FBgn0039140.2.mrna1;Target=FBgn0039140.2 1486 1653 +
Chr2	stalkie_big_nohaplotig	CDS	18533038	18533141	.	+	0	Parent=FBgn0039140.2.mrna1
Chr2	gffcl	locus	18537106	18538768	.	+	.	ID=RLOC_00015290;geneIDs=FBgn0039140.1.path1;transcripts=FBgn0039140.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18537106	18538768	.	+	.	ID=FBgn0039140.1.mrna1;geneID=FBgn0039140.1.path1;Name=FBgn0039140.1;Dir=sensecoverage=100.0;identity=98.9;matches=1447;mismatches=16;indels=0;unknowns=1;locus=RLOC_00015290
Chr2	stalkie_big_nohaplotig	exon	18537106	18537403	98	+	.	Parent=FBgn0039140.1.mrna1;Target=FBgn0039140.1 1 298 +
Chr2	stalkie_big_nohaplotig	exon	18537481	18537692	99	+	.	Parent=FBgn0039140.1.mrna1;Target=FBgn0039140.1 299 510 +
Chr2	stalkie_big_nohaplotig	exon	18537756	18537908	98	+	.	Parent=FBgn0039140.1.mrna1;Target=FBgn0039140.1 511 663 +
Chr2	stalkie_big_nohaplotig	exon	18537968	18538768	99	+	.	Parent=FBgn0039140.1.mrna1;Target=FBgn0039140.1 664 1464 +
Chr2	stalkie_big_nohaplotig	CDS	18537106	18537403	.	+	0	Parent=FBgn0039140.1.mrna1;Target=FBgn0039140.1 1 298 +
Chr2	stalkie_big_nohaplotig	CDS	18537481	18537692	.	+	2	Parent=FBgn0039140.1.mrna1;Target=FBgn0039140.1 299 510 +
Chr2	stalkie_big_nohaplotig	CDS	18537756	18537908	.	+	0	Parent=FBgn0039140.1.mrna1;Target=FBgn0039140.1 511 663 +
Chr2	stalkie_big_nohaplotig	CDS	18537968	18538768	.	+	0	Parent=FBgn0039140.1.mrna1;Target=FBgn0039140.1 664 1464 +
Chr2	gffcl	locus	18651922	18654060	.	+	.	ID=RLOC_00015291;geneIDs=FBgn0034718.1.path1;transcripts=FBgn0034718.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18651922	18654060	.	+	.	ID=FBgn0034718.1.mrna1;geneID=FBgn0034718.1.path1;Name=FBgn0034718.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=2121;mismatches=18;indels=0;unknowns=0;Target=FBgn0034718.1 2139 1 .;locus=RLOC_00015291
Chr2	stalkie_big_nohaplotig	exon	18651922	18654060	99	+	.	Parent=FBgn0034718.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18651922	18654060	.	+	0	Parent=FBgn0034718.1.mrna1
Chr2	gffcl	locus	18654852	18655691	.	+	.	ID=RLOC_00015292;geneIDs=comp195475_c0_seq1.path1;transcripts=comp195475_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18654852	18655691	.	+	.	ID=comp195475_c0_seq1.mrna1;geneID=comp195475_c0_seq1.path1;Name=comp195475_c0_seq1;Dir=indeterminatecoverage=98.5;identity=98.8;matches=836;mismatches=4;indels=6;unknowns=0;Target=comp195475_c0_seq1 846 1 .;CDS_Target=comp195475_c0_seq1 285 220 .;locus=RLOC_00015292
Chr2	stalkie_big_nohaplotig	exon	18654852	18655691	98	+	.	Parent=comp195475_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18655065	18655130	.	+	0	Parent=comp195475_c0_seq1.mrna1
Chr2	gffcl	locus	18658566	18661377	.	-	.	ID=RLOC_00015293;geneIDs=FBgn0034717.1.path1;transcripts=FBgn0034717.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18658566	18661377	.	-	.	ID=FBgn0034717.1.mrna1;geneID=FBgn0034717.1.path1;Name=FBgn0034717.1;Dir=sensecoverage=99.5;identity=100.0;matches=2627;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015293
Chr2	stalkie_big_nohaplotig	exon	18658566	18659396	100	-	.	Parent=FBgn0034717.1.mrna1;Target=FBgn0034717.1 1797 2627 +
Chr2	stalkie_big_nohaplotig	exon	18659459	18659718	100	-	.	Parent=FBgn0034717.1.mrna1;Target=FBgn0034717.1 1537 1796 +
Chr2	stalkie_big_nohaplotig	exon	18659778	18659994	100	-	.	Parent=FBgn0034717.1.mrna1;Target=FBgn0034717.1 1320 1536 +
Chr2	stalkie_big_nohaplotig	exon	18660059	18661377	100	-	.	Parent=FBgn0034717.1.mrna1;Target=FBgn0034717.1 1 1319 +
Chr2	stalkie_big_nohaplotig	CDS	18658568	18659396	.	-	1	Parent=FBgn0034717.1.mrna1;Target=FBgn0034717.1 1797 2625 +
Chr2	stalkie_big_nohaplotig	CDS	18659459	18659718	.	-	0	Parent=FBgn0034717.1.mrna1;Target=FBgn0034717.1 1537 1796 +
Chr2	stalkie_big_nohaplotig	CDS	18659778	18659994	.	-	1	Parent=FBgn0034717.1.mrna1;Target=FBgn0034717.1 1320 1536 +
Chr2	stalkie_big_nohaplotig	CDS	18660059	18661377	.	-	0	Parent=FBgn0034717.1.mrna1;Target=FBgn0034717.1 1 1319 +
Chr2	gffcl	locus	18679053	20581715	.	+	.	ID=RLOC_00015294;geneIDs=comp158172_c0_seq1.path1;transcripts=comp158172_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18679053	20581715	.	+	.	ID=comp158172_c0_seq1.mrna1;geneID=comp158172_c0_seq1.path1;Name=comp158172_c0_seq1;Dir=antisensecoverage=99.6;identity=97.8;matches=1377;mismatches=23;indels=8;unknowns=0;Target=comp158172_c0_seq1 886 1002 .;locus=RLOC_00015294
Chr2	stalkie_big_nohaplotig	exon	18679053	18679067	86	+	.	Parent=comp158172_c0_seq1.mrna1;Target=comp158172_c0_seq1 1393 1407 -
Chr2	stalkie_big_nohaplotig	exon	18682066	18682072	100	+	.	Parent=comp158172_c0_seq1.mrna1;Target=comp158172_c0_seq1 1386 1392 -
Chr2	stalkie_big_nohaplotig	exon	18683044	18683045	100	+	.	Parent=comp158172_c0_seq1.mrna1;Target=comp158172_c0_seq1 1384 1385 -
Chr2	stalkie_big_nohaplotig	exon	18684909	18684913	100	+	.	Parent=comp158172_c0_seq1.mrna1;Target=comp158172_c0_seq1 1379 1383 -
Chr2	stalkie_big_nohaplotig	exon	18692213	18692214	100	+	.	Parent=comp158172_c0_seq1.mrna1;Target=comp158172_c0_seq1 1377 1378 -
Chr2	stalkie_big_nohaplotig	exon	18698884	18698885	100	+	.	Parent=comp158172_c0_seq1.mrna1;Target=comp158172_c0_seq1 1375 1376 -
Chr2	stalkie_big_nohaplotig	exon	18700978	18700982	100	+	.	Parent=comp158172_c0_seq1.mrna1;Target=comp158172_c0_seq1 1370 1374 -
Chr2	stalkie_big_nohaplotig	exon	18704453	18704455	100	+	.	Parent=comp158172_c0_seq1.mrna1;Target=comp158172_c0_seq1 1367 1369 -
Chr2	stalkie_big_nohaplotig	exon	18711976	18711979	100	+	.	Parent=comp158172_c0_seq1.mrna1;Target=comp158172_c0_seq1 1363 1366 -
Chr2	stalkie_big_nohaplotig	exon	18713752	18713757	100	+	.	Parent=comp158172_c0_seq1.mrna1;Target=comp158172_c0_seq1 1357 1362 -
Chr2	stalkie_big_nohaplotig	exon	18714645	18714656	91	+	.	Parent=comp158172_c0_seq1.mrna1;Target=comp158172_c0_seq1 1346 1356 -
Chr2	stalkie_big_nohaplotig	exon	20580378	20581715	97	+	.	Parent=comp158172_c0_seq1.mrna1;Target=comp158172_c0_seq1 1 1345 -
Chr2	stalkie_big_nohaplotig	CDS	20580719	20580831	.	+	0	Parent=comp158172_c0_seq1.mrna1
Chr2	gffcl	locus	18801600	18802190	.	+	.	ID=RLOC_00015296;geneIDs=comp138468_c0_seq1.path1;transcripts=comp138468_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18801600	18802190	.	+	.	ID=comp138468_c0_seq1.mrna1;geneID=comp138468_c0_seq1.path1;Name=comp138468_c0_seq1;Dir=indeterminatecoverage=96.7;identity=100.0;matches=591;mismatches=0;indels=0;unknowns=0;Target=comp138468_c0_seq1 610 20 .;CDS_Target=comp138468_c0_seq1 132 22 .;locus=RLOC_00015296
Chr2	stalkie_big_nohaplotig	exon	18801600	18802190	100	+	.	Parent=comp138468_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18801602	18801712	.	+	0	Parent=comp138468_c0_seq1.mrna1
Chr2	gffcl	locus	18865594	18871538	.	+	.	ID=RLOC_00015297;geneIDs=FBgn0034716.2.path1;transcripts=FBgn0034716.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18865594	18871538	.	+	.	ID=FBgn0034716.2.mrna1;geneID=FBgn0034716.2.path1;Name=FBgn0034716.2;Dir=sensecoverage=100.0;identity=100.0;matches=2379;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015297
Chr2	stalkie_big_nohaplotig	exon	18865594	18865880	100	+	.	Parent=FBgn0034716.2.mrna1;Target=FBgn0034716.2 1 287 +
Chr2	stalkie_big_nohaplotig	exon	18868180	18868409	100	+	.	Parent=FBgn0034716.2.mrna1;Target=FBgn0034716.2 288 517 +
Chr2	stalkie_big_nohaplotig	exon	18868475	18868807	100	+	.	Parent=FBgn0034716.2.mrna1;Target=FBgn0034716.2 518 850 +
Chr2	stalkie_big_nohaplotig	exon	18869505	18870009	100	+	.	Parent=FBgn0034716.2.mrna1;Target=FBgn0034716.2 851 1355 +
Chr2	stalkie_big_nohaplotig	exon	18870072	18870278	100	+	.	Parent=FBgn0034716.2.mrna1;Target=FBgn0034716.2 1356 1562 +
Chr2	stalkie_big_nohaplotig	exon	18870341	18870488	100	+	.	Parent=FBgn0034716.2.mrna1;Target=FBgn0034716.2 1563 1710 +
Chr2	stalkie_big_nohaplotig	exon	18870750	18870926	100	+	.	Parent=FBgn0034716.2.mrna1;Target=FBgn0034716.2 1711 1887 +
Chr2	stalkie_big_nohaplotig	exon	18870987	18871306	100	+	.	Parent=FBgn0034716.2.mrna1;Target=FBgn0034716.2 1888 2207 +
Chr2	stalkie_big_nohaplotig	exon	18871367	18871538	100	+	.	Parent=FBgn0034716.2.mrna1;Target=FBgn0034716.2 2208 2379 +
Chr2	stalkie_big_nohaplotig	CDS	18865594	18865880	.	+	0	Parent=FBgn0034716.2.mrna1;Target=FBgn0034716.2 1 287 +
Chr2	stalkie_big_nohaplotig	CDS	18868180	18868409	.	+	1	Parent=FBgn0034716.2.mrna1;Target=FBgn0034716.2 288 517 +
Chr2	stalkie_big_nohaplotig	CDS	18868475	18868807	.	+	2	Parent=FBgn0034716.2.mrna1;Target=FBgn0034716.2 518 850 +
Chr2	stalkie_big_nohaplotig	CDS	18869505	18870009	.	+	2	Parent=FBgn0034716.2.mrna1;Target=FBgn0034716.2 851 1355 +
Chr2	stalkie_big_nohaplotig	CDS	18870072	18870278	.	+	1	Parent=FBgn0034716.2.mrna1;Target=FBgn0034716.2 1356 1562 +
Chr2	stalkie_big_nohaplotig	CDS	18870341	18870488	.	+	1	Parent=FBgn0034716.2.mrna1;Target=FBgn0034716.2 1563 1710 +
Chr2	stalkie_big_nohaplotig	CDS	18870750	18870926	.	+	0	Parent=FBgn0034716.2.mrna1;Target=FBgn0034716.2 1711 1887 +
Chr2	stalkie_big_nohaplotig	CDS	18870987	18871306	.	+	0	Parent=FBgn0034716.2.mrna1;Target=FBgn0034716.2 1888 2207 +
Chr2	stalkie_big_nohaplotig	CDS	18871367	18871538	.	+	1	Parent=FBgn0034716.2.mrna1;Target=FBgn0034716.2 2208 2379 +
Chr2	gffcl	locus	18874054	18877882	.	+	.	ID=RLOC_00015298;geneIDs=FBgn0034716.1.path1;transcripts=FBgn0034716.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18874054	18877882	.	+	.	ID=FBgn0034716.1.mrna1;geneID=FBgn0034716.1.path1;Name=FBgn0034716.1;Dir=sensecoverage=100.0;identity=99.9;matches=2218;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015298
Chr2	stalkie_big_nohaplotig	exon	18874054	18874307	100	+	.	Parent=FBgn0034716.1.mrna1;Target=FBgn0034716.1 1 254 +
Chr2	stalkie_big_nohaplotig	exon	18874450	18874679	100	+	.	Parent=FBgn0034716.1.mrna1;Target=FBgn0034716.1 255 484 +
Chr2	stalkie_big_nohaplotig	exon	18874738	18875073	100	+	.	Parent=FBgn0034716.1.mrna1;Target=FBgn0034716.1 485 820 +
Chr2	stalkie_big_nohaplotig	exon	18876303	18876768	99	+	.	Parent=FBgn0034716.1.mrna1;Target=FBgn0034716.1 821 1286 +
Chr2	stalkie_big_nohaplotig	exon	18876832	18877174	100	+	.	Parent=FBgn0034716.1.mrna1;Target=FBgn0034716.1 1287 1629 +
Chr2	stalkie_big_nohaplotig	exon	18877228	18877658	99	+	.	Parent=FBgn0034716.1.mrna1;Target=FBgn0034716.1 1630 2060 +
Chr2	stalkie_big_nohaplotig	exon	18877723	18877882	100	+	.	Parent=FBgn0034716.1.mrna1;Target=FBgn0034716.1 2061 2220 +
Chr2	stalkie_big_nohaplotig	CDS	18874054	18874307	.	+	0	Parent=FBgn0034716.1.mrna1;Target=FBgn0034716.1 1 254 +
Chr2	stalkie_big_nohaplotig	CDS	18874450	18874679	.	+	1	Parent=FBgn0034716.1.mrna1;Target=FBgn0034716.1 255 484 +
Chr2	stalkie_big_nohaplotig	CDS	18874738	18875073	.	+	2	Parent=FBgn0034716.1.mrna1;Target=FBgn0034716.1 485 820 +
Chr2	stalkie_big_nohaplotig	CDS	18876303	18876768	.	+	2	Parent=FBgn0034716.1.mrna1;Target=FBgn0034716.1 821 1286 +
Chr2	stalkie_big_nohaplotig	CDS	18876832	18877174	.	+	1	Parent=FBgn0034716.1.mrna1;Target=FBgn0034716.1 1287 1629 +
Chr2	stalkie_big_nohaplotig	CDS	18877228	18877658	.	+	0	Parent=FBgn0034716.1.mrna1;Target=FBgn0034716.1 1630 2060 +
Chr2	stalkie_big_nohaplotig	CDS	18877723	18877882	.	+	1	Parent=FBgn0034716.1.mrna1;Target=FBgn0034716.1 2061 2220 +
Chr2	gffcl	locus	18938184	18938990	.	-	.	ID=RLOC_00015299;geneIDs=comp154899_c0_seq1.path1;transcripts=comp154899_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18938184	18938990	.	-	.	ID=comp154899_c0_seq1.mrna1;geneID=comp154899_c0_seq1.path1;Name=comp154899_c0_seq1;Dir=indeterminatecoverage=100.0;identity=82.1;matches=736;mismatches=70;indels=91;unknowns=0;Target=comp154899_c0_seq1 896 1 .;CDS_Target=comp154899_c0_seq1 895 815 .;locus=RLOC_00015299
Chr2	stalkie_big_nohaplotig	exon	18938184	18938990	82	-	.	Parent=comp154899_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18938185	18938265	.	-	0	Parent=comp154899_c0_seq1.mrna1
Chr2	gffcl	locus	18957902	18958198	.	-	.	ID=RLOC_00015300;geneIDs=AGAP003785.path1;transcripts=AGAP003785.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18957902	18958198	.	-	.	ID=AGAP003785.mrna1;geneID=AGAP003785.path1;Name=AGAP003785;Dir=indeterminatecoverage=100.0;identity=99.7;matches=296;mismatches=1;indels=0;unknowns=0;Target=AGAP003785 297 1 .;locus=RLOC_00015300
Chr2	stalkie_big_nohaplotig	exon	18957902	18958198	99	-	.	Parent=AGAP003785.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18957902	18958198	.	-	0	Parent=AGAP003785.mrna1
Chr2	gffcl	locus	18961317	18961531	.	-	.	ID=RLOC_00015301;geneIDs=comp962137_c0_seq1.path1;transcripts=comp962137_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	18961317	18961531	.	-	.	ID=comp962137_c0_seq1.mrna1;geneID=comp962137_c0_seq1.path1;Name=comp962137_c0_seq1;Dir=indeterminatecoverage=100.0;identity=83.3;matches=179;mismatches=36;indels=0;unknowns=0;Target=comp962137_c0_seq1 215 1 .;CDS_Target=comp962137_c0_seq1 213 1 .;locus=RLOC_00015301
Chr2	stalkie_big_nohaplotig	exon	18961317	18961531	83	-	.	Parent=comp962137_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	18961319	18961531	.	-	0	Parent=comp962137_c0_seq1.mrna1
Chr2	gffcl	locus	19003680	19028029	.	+	.	ID=RLOC_00015302;geneIDs=comp144657_c0_seq1.path1;transcripts=comp144657_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19003680	19028029	.	+	.	ID=comp144657_c0_seq1.mrna1;geneID=comp144657_c0_seq1.path1;Name=comp144657_c0_seq1;Dir=antisensecoverage=93.1;identity=99.6;matches=781;mismatches=3;indels=0;unknowns=0;Target=comp144657_c0_seq1 615 692 .;locus=RLOC_00015302
Chr2	stalkie_big_nohaplotig	exon	19003680	19004046	100	+	.	Parent=comp144657_c0_seq1.mrna1;Target=comp144657_c0_seq1 476 842 -
Chr2	stalkie_big_nohaplotig	exon	19027613	19028029	99	+	.	Parent=comp144657_c0_seq1.mrna1;Target=comp144657_c0_seq1 59 475 -
Chr2	stalkie_big_nohaplotig	CDS	19003830	19003907	.	+	0	Parent=comp144657_c0_seq1.mrna1
Chr2	gffcl	locus	19069775	19070914	.	+	.	ID=RLOC_00015303;geneIDs=comp146669_c0_seq1.path1;transcripts=comp146669_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19069775	19070914	.	+	.	ID=comp146669_c0_seq1.mrna1;geneID=comp146669_c0_seq1.path1;Name=comp146669_c0_seq1;Dir=indeterminatecoverage=50.3;identity=99.6;matches=1136;mismatches=3;indels=1;unknowns=0;Target=comp146669_c0_seq1 2241 1103 .;CDS_Target=comp146669_c0_seq1 1934 1743 .;locus=RLOC_00015303
Chr2	stalkie_big_nohaplotig	exon	19069775	19070914	99	+	.	Parent=comp146669_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19070416	19070607	.	+	0	Parent=comp146669_c0_seq1.mrna1
Chr2	gffcl	locus	19083937	19115710	.	+	.	ID=RLOC_00015304;geneIDs=FBgn0264273.1.path1;transcripts=FBgn0264273.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19083937	19115710	.	+	.	ID=FBgn0264273.1.mrna1;geneID=FBgn0264273.1.path1;Name=FBgn0264273.1;Dir=sensecoverage=92.5;identity=100.0;matches=2015;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015304
Chr2	stalkie_big_nohaplotig	exon	19083937	19084030	100	+	.	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 164 257 +
Chr2	stalkie_big_nohaplotig	exon	19086887	19086938	100	+	.	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 258 309 +
Chr2	stalkie_big_nohaplotig	exon	19093798	19093866	100	+	.	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 310 378 +
Chr2	stalkie_big_nohaplotig	exon	19094214	19094321	100	+	.	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 379 486 +
Chr2	stalkie_big_nohaplotig	exon	19096016	19096153	100	+	.	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 487 624 +
Chr2	stalkie_big_nohaplotig	exon	19096545	19096677	100	+	.	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 625 757 +
Chr2	stalkie_big_nohaplotig	exon	19096808	19097164	100	+	.	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 758 1114 +
Chr2	stalkie_big_nohaplotig	exon	19106044	19106272	100	+	.	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 1115 1343 +
Chr2	stalkie_big_nohaplotig	exon	19108829	19109165	100	+	.	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 1344 1680 +
Chr2	stalkie_big_nohaplotig	exon	19109971	19110134	100	+	.	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 1681 1844 +
Chr2	stalkie_big_nohaplotig	exon	19111650	19111802	100	+	.	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 1845 1997 +
Chr2	stalkie_big_nohaplotig	exon	19113166	19113274	100	+	.	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 1998 2106 +
Chr2	stalkie_big_nohaplotig	exon	19115639	19115710	100	+	.	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 2107 2178 +
Chr2	stalkie_big_nohaplotig	CDS	19083939	19084030	.	+	0	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 166 257 +
Chr2	stalkie_big_nohaplotig	CDS	19086887	19086938	.	+	1	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 258 309 +
Chr2	stalkie_big_nohaplotig	CDS	19093798	19093866	.	+	0	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 310 378 +
Chr2	stalkie_big_nohaplotig	CDS	19094214	19094321	.	+	0	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 379 486 +
Chr2	stalkie_big_nohaplotig	CDS	19096016	19096153	.	+	0	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 487 624 +
Chr2	stalkie_big_nohaplotig	CDS	19096545	19096677	.	+	0	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 625 757 +
Chr2	stalkie_big_nohaplotig	CDS	19096808	19097164	.	+	2	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 758 1114 +
Chr2	stalkie_big_nohaplotig	CDS	19106044	19106272	.	+	2	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 1115 1343 +
Chr2	stalkie_big_nohaplotig	CDS	19108829	19109165	.	+	1	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 1344 1680 +
Chr2	stalkie_big_nohaplotig	CDS	19109971	19110134	.	+	0	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 1681 1844 +
Chr2	stalkie_big_nohaplotig	CDS	19111650	19111802	.	+	1	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 1845 1997 +
Chr2	stalkie_big_nohaplotig	CDS	19113166	19113274	.	+	1	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 1998 2106 +
Chr2	stalkie_big_nohaplotig	CDS	19115639	19115710	.	+	0	Parent=FBgn0264273.1.mrna1;Target=FBgn0264273.1 2107 2178 +
Chr2	gffcl	locus	19127167	19128079	.	+	.	ID=RLOC_00015305;geneIDs=comp151522_c0_seq1.path1;transcripts=comp151522_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19127167	19128079	.	+	.	ID=comp151522_c0_seq1.mrna1;geneID=comp151522_c0_seq1.path1;Name=comp151522_c0_seq1;Dir=antisensecoverage=99.9;identity=97.3;matches=806;mismatches=9;indels=13;unknowns=0;Target=comp151522_c0_seq1 327 650 .;locus=RLOC_00015305
Chr2	stalkie_big_nohaplotig	exon	19127167	19127865	96	+	.	Parent=comp151522_c0_seq1.mrna1;Target=comp151522_c0_seq1 131 816 -
Chr2	stalkie_big_nohaplotig	exon	19127951	19128079	100	+	.	Parent=comp151522_c0_seq1.mrna1;Target=comp151522_c0_seq1 2 130 -
Chr2	stalkie_big_nohaplotig	CDS	19127333	19127656	.	+	0	Parent=comp151522_c0_seq1.mrna1
Chr2	gffcl	locus	19134152	19134964	.	-	.	ID=RLOC_00015306;geneIDs=FBgn0034126.1.path1;transcripts=FBgn0034126.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19134152	19134964	.	-	.	ID=FBgn0034126.1.mrna1;geneID=FBgn0034126.1.path1;Name=FBgn0034126.1;Dir=sensecoverage=100.0;identity=100.0;matches=741;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015306
Chr2	stalkie_big_nohaplotig	exon	19134152	19134259	100	-	.	Parent=FBgn0034126.1.mrna1;Target=FBgn0034126.1 634 741 +
Chr2	stalkie_big_nohaplotig	exon	19134332	19134964	100	-	.	Parent=FBgn0034126.1.mrna1;Target=FBgn0034126.1 1 633 +
Chr2	stalkie_big_nohaplotig	CDS	19134152	19134259	.	-	0	Parent=FBgn0034126.1.mrna1;Target=FBgn0034126.1 634 741 +
Chr2	stalkie_big_nohaplotig	CDS	19134332	19134964	.	-	0	Parent=FBgn0034126.1.mrna1;Target=FBgn0034126.1 1 633 +
Chr2	gffcl	locus	19157390	19157797	.	+	.	ID=RLOC_00015307;geneIDs=comp227240_c0_seq1.path1;transcripts=comp227240_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19157390	19157797	.	+	.	ID=comp227240_c0_seq1.mrna1;geneID=comp227240_c0_seq1.path1;Name=comp227240_c0_seq1;Dir=indeterminatecoverage=97.6;identity=99.8;matches=407;mismatches=1;indels=0;unknowns=0;Target=comp227240_c0_seq1 418 11 .;CDS_Target=comp227240_c0_seq1 418 161 .;locus=RLOC_00015307
Chr2	stalkie_big_nohaplotig	exon	19157390	19157797	99	+	.	Parent=comp227240_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19157540	19157797	.	+	0	Parent=comp227240_c0_seq1.mrna1
Chr2	gffcl	locus	19157801	19161923	.	+	.	ID=RLOC_00015308;geneIDs=FBgn0034128.1.path1;transcripts=FBgn0034128.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19157801	19161923	.	+	.	ID=FBgn0034128.1.mrna1;geneID=FBgn0034128.1.path1;Name=FBgn0034128.1;Dir=sensecoverage=100.0;identity=99.9;matches=839;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015308
Chr2	stalkie_big_nohaplotig	exon	19157801	19158302	99	+	.	Parent=FBgn0034128.1.mrna1;Target=FBgn0034128.1 1 502 +
Chr2	stalkie_big_nohaplotig	exon	19160426	19160658	100	+	.	Parent=FBgn0034128.1.mrna1;Target=FBgn0034128.1 503 735 +
Chr2	stalkie_big_nohaplotig	exon	19161819	19161923	100	+	.	Parent=FBgn0034128.1.mrna1;Target=FBgn0034128.1 736 840 +
Chr2	stalkie_big_nohaplotig	CDS	19157801	19158302	.	+	0	Parent=FBgn0034128.1.mrna1;Target=FBgn0034128.1 1 502 +
Chr2	stalkie_big_nohaplotig	CDS	19160426	19160658	.	+	2	Parent=FBgn0034128.1.mrna1;Target=FBgn0034128.1 503 735 +
Chr2	stalkie_big_nohaplotig	CDS	19161819	19161923	.	+	0	Parent=FBgn0034128.1.mrna1;Target=FBgn0034128.1 736 840 +
Chr2	gffcl	locus	19182813	19188820	.	+	.	ID=RLOC_00015309;geneIDs=FBgn0031170.6.path1;transcripts=FBgn0031170.6.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19182813	19188820	.	+	.	ID=FBgn0031170.6.mrna1;geneID=FBgn0031170.6.path1;Name=FBgn0031170.6;Dir=sensecoverage=100.0;identity=99.9;matches=5213;mismatches=7;indels=0;unknowns=0;locus=RLOC_00015309
Chr2	stalkie_big_nohaplotig	exon	19182813	19183219	99	+	.	Parent=FBgn0031170.6.mrna1;Target=FBgn0031170.6 1 407 +
Chr2	stalkie_big_nohaplotig	exon	19183288	19183873	100	+	.	Parent=FBgn0031170.6.mrna1;Target=FBgn0031170.6 408 993 +
Chr2	stalkie_big_nohaplotig	exon	19183939	19184082	100	+	.	Parent=FBgn0031170.6.mrna1;Target=FBgn0031170.6 994 1137 +
Chr2	stalkie_big_nohaplotig	exon	19184144	19185394	99	+	.	Parent=FBgn0031170.6.mrna1;Target=FBgn0031170.6 1138 2388 +
Chr2	stalkie_big_nohaplotig	exon	19185460	19186307	99	+	.	Parent=FBgn0031170.6.mrna1;Target=FBgn0031170.6 2389 3236 +
Chr2	stalkie_big_nohaplotig	exon	19186442	19186791	100	+	.	Parent=FBgn0031170.6.mrna1;Target=FBgn0031170.6 3237 3586 +
Chr2	stalkie_big_nohaplotig	exon	19186921	19187280	100	+	.	Parent=FBgn0031170.6.mrna1;Target=FBgn0031170.6 3587 3946 +
Chr2	stalkie_big_nohaplotig	exon	19187342	19187486	100	+	.	Parent=FBgn0031170.6.mrna1;Target=FBgn0031170.6 3947 4091 +
Chr2	stalkie_big_nohaplotig	exon	19187563	19187763	100	+	.	Parent=FBgn0031170.6.mrna1;Target=FBgn0031170.6 4092 4292 +
Chr2	stalkie_big_nohaplotig	exon	19187830	19188561	100	+	.	Parent=FBgn0031170.6.mrna1;Target=FBgn0031170.6 4293 5024 +
Chr2	stalkie_big_nohaplotig	exon	19188625	19188820	100	+	.	Parent=FBgn0031170.6.mrna1;Target=FBgn0031170.6 5025 5220 +
Chr2	stalkie_big_nohaplotig	CDS	19182813	19183219	.	+	0	Parent=FBgn0031170.6.mrna1;Target=FBgn0031170.6 1 407 +
Chr2	stalkie_big_nohaplotig	CDS	19183288	19183873	.	+	1	Parent=FBgn0031170.6.mrna1;Target=FBgn0031170.6 408 993 +
Chr2	stalkie_big_nohaplotig	CDS	19183939	19184082	.	+	0	Parent=FBgn0031170.6.mrna1;Target=FBgn0031170.6 994 1137 +
Chr2	stalkie_big_nohaplotig	CDS	19184144	19185394	.	+	0	Parent=FBgn0031170.6.mrna1;Target=FBgn0031170.6 1138 2388 +
Chr2	stalkie_big_nohaplotig	CDS	19185460	19186307	.	+	0	Parent=FBgn0031170.6.mrna1;Target=FBgn0031170.6 2389 3236 +
Chr2	stalkie_big_nohaplotig	CDS	19186442	19186791	.	+	1	Parent=FBgn0031170.6.mrna1;Target=FBgn0031170.6 3237 3586 +
Chr2	stalkie_big_nohaplotig	CDS	19186921	19187280	.	+	2	Parent=FBgn0031170.6.mrna1;Target=FBgn0031170.6 3587 3946 +
Chr2	stalkie_big_nohaplotig	CDS	19187342	19187486	.	+	2	Parent=FBgn0031170.6.mrna1;Target=FBgn0031170.6 3947 4091 +
Chr2	stalkie_big_nohaplotig	CDS	19187563	19187763	.	+	1	Parent=FBgn0031170.6.mrna1;Target=FBgn0031170.6 4092 4292 +
Chr2	stalkie_big_nohaplotig	CDS	19187830	19188561	.	+	1	Parent=FBgn0031170.6.mrna1;Target=FBgn0031170.6 4293 5024 +
Chr2	stalkie_big_nohaplotig	CDS	19188625	19188820	.	+	1	Parent=FBgn0031170.6.mrna1;Target=FBgn0031170.6 5025 5220 +
Chr2	gffcl	locus	19204305	19205013	.	+	.	ID=RLOC_00015310;geneIDs=comp109299_c0_seq1.path1;transcripts=comp109299_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19204305	19205013	.	+	.	ID=comp109299_c0_seq1.mrna1;geneID=comp109299_c0_seq1.path1;Name=comp109299_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=709;mismatches=0;indels=0;unknowns=0;Target=comp109299_c0_seq1 710 2 .;CDS_Target=comp109299_c0_seq1 119 3 .;locus=RLOC_00015310
Chr2	stalkie_big_nohaplotig	exon	19204305	19205013	100	+	.	Parent=comp109299_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19204306	19204422	.	+	0	Parent=comp109299_c0_seq1.mrna1
Chr2	gffcl	locus	19238954	19239546	.	-	.	ID=RLOC_00015311;geneIDs=Dp_FBgn0249362.path7;transcripts=Dp_FBgn0249362.mrna7
Chr2	stalkie_big_nohaplotig	mRNA	19238954	19239546	.	-	.	ID=Dp_FBgn0249362.mrna7;geneID=Dp_FBgn0249362.path7;Name=Dp_FBgn0249362;Dir=indeterminatecoverage=100.0;identity=99.3;matches=590;mismatches=3;indels=1;unknowns=0;Target=Dp_FBgn0249362 594 1 .;locus=RLOC_00015311
Chr2	stalkie_big_nohaplotig	exon	19238954	19239546	99	-	.	Parent=Dp_FBgn0249362.mrna7
Chr2	stalkie_big_nohaplotig	CDS	19238954	19239546	.	-	0	Parent=Dp_FBgn0249362.mrna7
Chr2	gffcl	locus	19333827	19334705	.	+	.	ID=RLOC_00015312;geneIDs=FBgn0029942.2.path1;transcripts=FBgn0029942.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19333827	19334705	.	+	.	ID=FBgn0029942.2.mrna1;geneID=FBgn0029942.2.path1;Name=FBgn0029942.2;Dir=indeterminatecoverage=99.0;identity=100.0;matches=879;mismatches=0;indels=0;unknowns=0;Target=FBgn0029942.2 888 10 .;locus=RLOC_00015312
Chr2	stalkie_big_nohaplotig	exon	19333827	19334705	100	+	.	Parent=FBgn0029942.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19333827	19334705	.	+	0	Parent=FBgn0029942.2.mrna1
Chr2	gffcl	locus	19336951	19337838	.	+	.	ID=RLOC_00015313;geneIDs=FBgn0029942.1.path1;transcripts=FBgn0029942.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19336951	19337838	.	+	.	ID=FBgn0029942.1.mrna1;geneID=FBgn0029942.1.path1;Name=FBgn0029942.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=888;mismatches=0;indels=0;unknowns=0;Target=FBgn0029942.1 888 1 .;locus=RLOC_00015313
Chr2	stalkie_big_nohaplotig	exon	19336951	19337838	100	+	.	Parent=FBgn0029942.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19336951	19337838	.	+	0	Parent=FBgn0029942.1.mrna1
Chr2	gffcl	locus	19342089	19343210	.	+	.	ID=RLOC_00015314;geneIDs=AAEL001413.1.path1;transcripts=AAEL001413.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19342089	19343210	.	+	.	ID=AAEL001413.1.mrna1;geneID=AAEL001413.1.path1;Name=AAEL001413.1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1110;mismatches=12;indels=0;unknowns=0;Target=AAEL001413.1 1122 1 .;locus=RLOC_00015314
Chr2	stalkie_big_nohaplotig	exon	19342089	19343210	98	+	.	Parent=AAEL001413.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19342089	19343210	.	+	0	Parent=AAEL001413.1.mrna1
Chr2	gffcl	locus	19367621	19368671	.	+	.	ID=RLOC_00015315;geneIDs=FBgn0032492.1.path1;transcripts=FBgn0032492.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19367621	19368671	.	+	.	ID=FBgn0032492.1.mrna1;geneID=FBgn0032492.1.path1;Name=FBgn0032492.1;Dir=sensecoverage=100.0;identity=100.0;matches=744;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015315
Chr2	stalkie_big_nohaplotig	exon	19367621	19367638	100	+	.	Parent=FBgn0032492.1.mrna1;Target=FBgn0032492.1 1 18 +
Chr2	stalkie_big_nohaplotig	exon	19367696	19368325	100	+	.	Parent=FBgn0032492.1.mrna1;Target=FBgn0032492.1 19 648 +
Chr2	stalkie_big_nohaplotig	exon	19368576	19368671	100	+	.	Parent=FBgn0032492.1.mrna1;Target=FBgn0032492.1 649 744 +
Chr2	stalkie_big_nohaplotig	CDS	19367621	19367638	.	+	0	Parent=FBgn0032492.1.mrna1;Target=FBgn0032492.1 1 18 +
Chr2	stalkie_big_nohaplotig	CDS	19367696	19368325	.	+	0	Parent=FBgn0032492.1.mrna1;Target=FBgn0032492.1 19 648 +
Chr2	stalkie_big_nohaplotig	CDS	19368576	19368671	.	+	0	Parent=FBgn0032492.1.mrna1;Target=FBgn0032492.1 649 744 +
Chr2	gffcl	locus	19369222	19421517	.	+	.	ID=RLOC_00015316;geneIDs=FBgn0011260.1.path1,comp157791_c13_seq1.path1;transcripts=comp157791_c13_seq1.mrna1,FBgn0011260.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19369222	19421517	.	+	.	ID=comp157791_c13_seq1.mrna1;geneID=comp157791_c13_seq1.path1;Name=comp157791_c13_seq1;Dir=antisensecoverage=100.0;identity=98.0;matches=1065;mismatches=11;indels=11;unknowns=0;locus=RLOC_00015316
Chr2	stalkie_big_nohaplotig	exon	19369222	19369539	99	+	.	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 2484 2801 -
Chr2	stalkie_big_nohaplotig	exon	19372341	19372667	100	+	.	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 2157 2483 -
Chr2	stalkie_big_nohaplotig	exon	19411850	19411937	100	+	.	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 2069 2156 -
Chr2	stalkie_big_nohaplotig	exon	19412009	19412063	96	+	.	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 2014 2068 -
Chr2	stalkie_big_nohaplotig	exon	19412232	19412250	43	+	.	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 1984 2013 -
Chr2	stalkie_big_nohaplotig	exon	19419004	19419011	100	+	.	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 1638 1645 -
Chr2	stalkie_big_nohaplotig	exon	19419016	19419024	100	+	.	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 1607 1615 -
Chr2	stalkie_big_nohaplotig	exon	19419474	19419479	100	+	.	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 1601 1606 -
Chr2	stalkie_big_nohaplotig	exon	19420496	19420503	100	+	.	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 1424 1431 -
Chr2	stalkie_big_nohaplotig	exon	19420666	19420673	100	+	.	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 860 867 -
Chr2	stalkie_big_nohaplotig	exon	19421195	19421202	100	+	.	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 467 474 -
Chr2	stalkie_big_nohaplotig	exon	19421299	19421517	100	+	.	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 2 220 -
Chr2	stalkie_big_nohaplotig	CDS	19372454	19372667	.	+	0	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 2157 2370 .
Chr2	stalkie_big_nohaplotig	CDS	19411850	19411937	.	+	2	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 2069 2156 .
Chr2	stalkie_big_nohaplotig	CDS	19412009	19412063	.	+	1	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 2014 2068 .
Chr2	stalkie_big_nohaplotig	CDS	19412232	19412250	.	+	0	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 1984 2013 .
Chr2	stalkie_big_nohaplotig	CDS	19419004	19419011	.	+	2	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 1638 1645 .
Chr2	stalkie_big_nohaplotig	CDS	19419016	19419024	.	+	0	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 1607 1615 .
Chr2	stalkie_big_nohaplotig	CDS	19419474	19419479	.	+	0	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 1601 1606 .
Chr2	stalkie_big_nohaplotig	CDS	19420496	19420503	.	+	0	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 1424 1431 .
Chr2	stalkie_big_nohaplotig	CDS	19420666	19420673	.	+	1	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 860 867 .
Chr2	stalkie_big_nohaplotig	CDS	19421195	19421202	.	+	2	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 467 474 .
Chr2	stalkie_big_nohaplotig	CDS	19421299	19421368	.	+	0	Parent=comp157791_c13_seq1.mrna1;Target=comp157791_c13_seq1 151 220 .
Chr2	stalkie_big_nohaplotig	mRNA	19372439	19421365	.	+	.	ID=FBgn0011260.1.mrna1;geneID=FBgn0011260.1.path1;Name=FBgn0011260.1;Dir=sensecoverage=100.0;identity=96.4;matches=455;mismatches=9;indels=8;unknowns=0;locus=RLOC_00015316
Chr2	stalkie_big_nohaplotig	exon	19372439	19372667	100	+	.	Parent=FBgn0011260.1.mrna1;Target=FBgn0011260.1 1 229 +
Chr2	stalkie_big_nohaplotig	exon	19411850	19411937	100	+	.	Parent=FBgn0011260.1.mrna1;Target=FBgn0011260.1 230 317 +
Chr2	stalkie_big_nohaplotig	exon	19412009	19412060	100	+	.	Parent=FBgn0011260.1.mrna1;Target=FBgn0011260.1 318 369 +
Chr2	stalkie_big_nohaplotig	exon	19417789	19417824	52	+	.	Parent=FBgn0011260.1.mrna1;Target=FBgn0011260.1 2106 2133 +
Chr2	stalkie_big_nohaplotig	exon	19421299	19421365	100	+	.	Parent=FBgn0011260.1.mrna1;Target=FBgn0011260.1 2166 2232 +
Chr2	stalkie_big_nohaplotig	CDS	19372439	19372667	.	+	0	Parent=FBgn0011260.1.mrna1;Target=FBgn0011260.1 1 229 +
Chr2	stalkie_big_nohaplotig	CDS	19411850	19411937	.	+	2	Parent=FBgn0011260.1.mrna1;Target=FBgn0011260.1 230 317 +
Chr2	stalkie_big_nohaplotig	CDS	19412009	19412060	.	+	1	Parent=FBgn0011260.1.mrna1;Target=FBgn0011260.1 318 369 +
Chr2	stalkie_big_nohaplotig	CDS	19417789	19417824	.	+	0	Parent=FBgn0011260.1.mrna1;Target=FBgn0011260.1 2106 2133 +
Chr2	stalkie_big_nohaplotig	CDS	19421299	19421365	.	+	0	Parent=FBgn0011260.1.mrna1;Target=FBgn0011260.1 2166 2232 +
Chr2	gffcl	locus	19370299	19370789	.	-	.	ID=RLOC_00015317;geneIDs=comp141185_c0_seq1.path1;transcripts=comp141185_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19370299	19370789	.	-	.	ID=comp141185_c0_seq1.mrna1;geneID=comp141185_c0_seq1.path1;Name=comp141185_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=491;mismatches=0;indels=0;unknowns=0;Target=comp141185_c0_seq1 492 2 .;CDS_Target=comp141185_c0_seq1 413 357 .;locus=RLOC_00015317
Chr2	stalkie_big_nohaplotig	exon	19370299	19370789	100	-	.	Parent=comp141185_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19370378	19370434	.	-	0	Parent=comp141185_c0_seq1.mrna1
Chr2	gffcl	locus	19421839	19422449	.	-	.	ID=RLOC_00015319;geneIDs=comp148490_c0_seq1.path1;transcripts=comp148490_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19421839	19422449	.	-	.	ID=comp148490_c0_seq1.mrna1;geneID=comp148490_c0_seq1.path1;Name=comp148490_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=610;mismatches=1;indels=0;unknowns=0;Target=comp148490_c0_seq1 611 1 .;CDS_Target=comp148490_c0_seq1 86 45 .;locus=RLOC_00015319
Chr2	stalkie_big_nohaplotig	exon	19421839	19422449	99	-	.	Parent=comp148490_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19422364	19422405	.	-	0	Parent=comp148490_c0_seq1.mrna1
Chr2	gffcl	locus	19422796	19423371	.	-	.	ID=RLOC_00015320;geneIDs=comp117160_c0_seq1.path1;transcripts=comp117160_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19422796	19423371	.	-	.	ID=comp117160_c0_seq1.mrna1;geneID=comp117160_c0_seq1.path1;Name=comp117160_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=576;mismatches=0;indels=0;unknowns=0;Target=comp117160_c0_seq1 576 1 .;CDS_Target=comp117160_c0_seq1 478 344 .;locus=RLOC_00015320
Chr2	stalkie_big_nohaplotig	exon	19422796	19423371	100	-	.	Parent=comp117160_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19422894	19423028	.	-	0	Parent=comp117160_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19476423	21061096	.	+	.	ID=comp163584_c0_seq1.mrna1;geneID=comp163584_c0_seq1.path1;Name=comp163584_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.8;matches=950;mismatches=18;indels=13;unknowns=0;locus=RLOC_00015321
Chr2	stalkie_big_nohaplotig	exon	19476423	19476515	98	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 93 1 .
Chr2	stalkie_big_nohaplotig	exon	19478560	19478567	100	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 101 94 .
Chr2	stalkie_big_nohaplotig	exon	19485200	19485212	76	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 114 102 .
Chr2	stalkie_big_nohaplotig	exon	19491556	19491562	100	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 130 124 .
Chr2	stalkie_big_nohaplotig	exon	19495181	19495191	81	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 141 131 .
Chr2	stalkie_big_nohaplotig	exon	19505030	19505040	100	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 152 142 .
Chr2	stalkie_big_nohaplotig	exon	19505753	19505754	100	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 154 153 .
Chr2	stalkie_big_nohaplotig	exon	19527892	19527899	100	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 162 155 .
Chr2	stalkie_big_nohaplotig	exon	19540412	19540441	58	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 205 163 .
Chr2	stalkie_big_nohaplotig	exon	19545191	19545192	100	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 207 206 .
Chr2	stalkie_big_nohaplotig	exon	19553372	19553373	100	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 209 208 .
Chr2	stalkie_big_nohaplotig	exon	19561962	19561971	100	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 219 210 .
Chr2	stalkie_big_nohaplotig	exon	19567829	19567840	100	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 231 220 .
Chr2	stalkie_big_nohaplotig	exon	19568598	19568608	100	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 249 239 .
Chr2	stalkie_big_nohaplotig	exon	19585528	19585534	100	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 284 278 .
Chr2	stalkie_big_nohaplotig	exon	19608994	19608999	100	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 290 285 .
Chr2	stalkie_big_nohaplotig	exon	19611904	19611915	100	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 302 291 .
Chr2	stalkie_big_nohaplotig	exon	19619103	19619111	100	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 331 323 .
Chr2	stalkie_big_nohaplotig	exon	19622019	19622024	100	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 337 332 .
Chr2	stalkie_big_nohaplotig	exon	19626441	19626443	100	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 340 338 .
Chr2	stalkie_big_nohaplotig	exon	19638755	19638757	100	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 343 341 .
Chr2	stalkie_big_nohaplotig	exon	19638951	19638960	90	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 353 344 .
Chr2	stalkie_big_nohaplotig	exon	21060408	21061096	99	+	.	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 1042 354 .
Chr2	stalkie_big_nohaplotig	CDS	19495181	19495191	.	+	0	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 141 131 .
Chr2	stalkie_big_nohaplotig	CDS	19505030	19505040	.	+	1	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 152 142 .
Chr2	stalkie_big_nohaplotig	CDS	19505753	19505754	.	+	2	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 154 153 .
Chr2	stalkie_big_nohaplotig	CDS	19527892	19527899	.	+	0	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 162 155 .
Chr2	stalkie_big_nohaplotig	CDS	19540412	19540433	.	+	1	Parent=comp163584_c0_seq1.mrna1;Target=comp163584_c0_seq1 187 163 .
Chr2	stalkie_big_nohaplotig	mRNA	19542698	19572901	.	+	.	ID=FBgn0034135.1.mrna1;geneID=FBgn0034135.1.path1;Name=FBgn0034135.1;Dir=sensecoverage=99.2;identity=100.0;matches=1541;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015321
Chr2	stalkie_big_nohaplotig	exon	19542698	19542762	100	+	.	Parent=FBgn0034135.1.mrna1;Target=FBgn0034135.1 14 78 +
Chr2	stalkie_big_nohaplotig	exon	19545382	19545525	100	+	.	Parent=FBgn0034135.1.mrna1;Target=FBgn0034135.1 79 222 +
Chr2	stalkie_big_nohaplotig	exon	19547940	19548225	100	+	.	Parent=FBgn0034135.1.mrna1;Target=FBgn0034135.1 223 508 +
Chr2	stalkie_big_nohaplotig	exon	19550272	19550436	100	+	.	Parent=FBgn0034135.1.mrna1;Target=FBgn0034135.1 509 673 +
Chr2	stalkie_big_nohaplotig	exon	19550513	19550697	100	+	.	Parent=FBgn0034135.1.mrna1;Target=FBgn0034135.1 674 858 +
Chr2	stalkie_big_nohaplotig	exon	19553290	19553448	100	+	.	Parent=FBgn0034135.1.mrna1;Target=FBgn0034135.1 859 1017 +
Chr2	stalkie_big_nohaplotig	exon	19562885	19563109	100	+	.	Parent=FBgn0034135.1.mrna1;Target=FBgn0034135.1 1018 1242 +
Chr2	stalkie_big_nohaplotig	exon	19570559	19570762	100	+	.	Parent=FBgn0034135.1.mrna1;Target=FBgn0034135.1 1243 1446 +
Chr2	stalkie_big_nohaplotig	exon	19572794	19572901	100	+	.	Parent=FBgn0034135.1.mrna1;Target=FBgn0034135.1 1447 1554 +
Chr2	stalkie_big_nohaplotig	CDS	19542700	19542762	.	+	0	Parent=FBgn0034135.1.mrna1;Target=FBgn0034135.1 16 78 +
Chr2	stalkie_big_nohaplotig	CDS	19545382	19545525	.	+	0	Parent=FBgn0034135.1.mrna1;Target=FBgn0034135.1 79 222 +
Chr2	stalkie_big_nohaplotig	CDS	19547940	19548225	.	+	0	Parent=FBgn0034135.1.mrna1;Target=FBgn0034135.1 223 508 +
Chr2	stalkie_big_nohaplotig	CDS	19550272	19550436	.	+	2	Parent=FBgn0034135.1.mrna1;Target=FBgn0034135.1 509 673 +
Chr2	stalkie_big_nohaplotig	CDS	19550513	19550697	.	+	2	Parent=FBgn0034135.1.mrna1;Target=FBgn0034135.1 674 858 +
Chr2	stalkie_big_nohaplotig	CDS	19553290	19553448	.	+	0	Parent=FBgn0034135.1.mrna1;Target=FBgn0034135.1 859 1017 +
Chr2	stalkie_big_nohaplotig	CDS	19562885	19563109	.	+	0	Parent=FBgn0034135.1.mrna1;Target=FBgn0034135.1 1018 1242 +
Chr2	stalkie_big_nohaplotig	CDS	19570559	19570762	.	+	0	Parent=FBgn0034135.1.mrna1;Target=FBgn0034135.1 1243 1446 +
Chr2	stalkie_big_nohaplotig	CDS	19572794	19572901	.	+	0	Parent=FBgn0034135.1.mrna1;Target=FBgn0034135.1 1447 1554 +
Chr2	gffcl	locus	19499723	19500601	.	-	.	ID=RLOC_00015323;geneIDs=Dp_FBgn0245002.1.path1;transcripts=Dp_FBgn0245002.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19499723	19500601	.	-	.	ID=Dp_FBgn0245002.1.mrna1;geneID=Dp_FBgn0245002.1.path1;Name=Dp_FBgn0245002.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=879;mismatches=0;indels=0;unknowns=0;Target=Dp_FBgn0245002.1 879 1 .;locus=RLOC_00015323
Chr2	stalkie_big_nohaplotig	exon	19499723	19500601	100	-	.	Parent=Dp_FBgn0245002.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19499723	19500601	.	-	0	Parent=Dp_FBgn0245002.1.mrna1
Chr2	gffcl	locus	19574437	19578149	.	-	.	ID=RLOC_00015324;geneIDs=comp149546_c0_seq1.path1;transcripts=comp149546_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19574437	19578149	.	-	.	ID=comp149546_c0_seq1.mrna1;geneID=comp149546_c0_seq1.path1;Name=comp149546_c0_seq1;Dir=indeterminatecoverage=60.5;identity=100.0;matches=201;mismatches=0;indels=0;unknowns=0;Target=comp149546_c0_seq1 182 108 .;locus=RLOC_00015324
Chr2	stalkie_big_nohaplotig	exon	19574437	19574440	100	-	.	Parent=comp149546_c0_seq1.mrna1;Target=comp149546_c0_seq1 201 198 .
Chr2	stalkie_big_nohaplotig	exon	19577953	19578149	100	-	.	Parent=comp149546_c0_seq1.mrna1;Target=comp149546_c0_seq1 197 1 .
Chr2	stalkie_big_nohaplotig	CDS	19577968	19578042	.	-	0	Parent=comp149546_c0_seq1.mrna1
Chr2	gffcl	locus	19575654	19577648	.	.	.	ID=RLOC_00015325;geneIDs=comp146448_c0_seq2.path1,comp155774_c0_seq1.path1;transcripts=comp155774_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19575654	19577017	.	+	.	ID=comp155774_c0_seq1.mrna1;geneID=comp155774_c0_seq1.path1;Name=comp155774_c0_seq1;Dir=indeterminatecoverage=94.9;identity=98.8;matches=1353;mismatches=7;indels=9;unknowns=0;Target=comp155774_c0_seq1 1439 75 .;CDS_Target=comp155774_c0_seq1 1285 1217 .;locus=RLOC_00015325
Chr2	stalkie_big_nohaplotig	exon	19575654	19577017	98	+	.	Parent=comp155774_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19576796	19576864	.	+	0	Parent=comp155774_c0_seq1.mrna1
Chr2	gffcl	locus	19582999	19583283	.	+	.	ID=RLOC_00015326;geneIDs=comp64204_c0_seq1.path1;transcripts=comp64204_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19582999	19583283	.	+	.	ID=comp64204_c0_seq1.mrna1;geneID=comp64204_c0_seq1.path1;Name=comp64204_c0_seq1;Dir=indeterminatecoverage=95.3;identity=97.6;matches=280;mismatches=4;indels=3;unknowns=0;Target=comp64204_c0_seq1 300 15 .;CDS_Target=comp64204_c0_seq1 214 191 .;locus=RLOC_00015326
Chr2	stalkie_big_nohaplotig	exon	19582999	19583283	97	+	.	Parent=comp64204_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19583175	19583196	.	+	0	Parent=comp64204_c0_seq1.mrna1
Chr2	gffcl	locus	19584075	19593992	.	-	.	ID=RLOC_00015327;geneIDs=FBgn0034136.1.path1;transcripts=FBgn0034136.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19584075	19593992	.	-	.	ID=FBgn0034136.1.mrna1;geneID=FBgn0034136.1.path1;Name=FBgn0034136.1;Dir=sensecoverage=94.6;identity=99.9;matches=1896;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015327
Chr2	stalkie_big_nohaplotig	exon	19584075	19584185	100	-	.	Parent=FBgn0034136.1.mrna1;Target=FBgn0034136.1 1897 2007 +
Chr2	stalkie_big_nohaplotig	exon	19584254	19584522	100	-	.	Parent=FBgn0034136.1.mrna1;Target=FBgn0034136.1 1628 1896 +
Chr2	stalkie_big_nohaplotig	exon	19584648	19584876	100	-	.	Parent=FBgn0034136.1.mrna1;Target=FBgn0034136.1 1399 1627 +
Chr2	stalkie_big_nohaplotig	exon	19584984	19585221	99	-	.	Parent=FBgn0034136.1.mrna1;Target=FBgn0034136.1 1161 1398 +
Chr2	stalkie_big_nohaplotig	exon	19585319	19585696	100	-	.	Parent=FBgn0034136.1.mrna1;Target=FBgn0034136.1 783 1160 +
Chr2	stalkie_big_nohaplotig	exon	19585785	19585948	100	-	.	Parent=FBgn0034136.1.mrna1;Target=FBgn0034136.1 619 782 +
Chr2	stalkie_big_nohaplotig	exon	19586014	19586168	100	-	.	Parent=FBgn0034136.1.mrna1;Target=FBgn0034136.1 464 618 +
Chr2	stalkie_big_nohaplotig	exon	19586252	19586386	100	-	.	Parent=FBgn0034136.1.mrna1;Target=FBgn0034136.1 329 463 +
Chr2	stalkie_big_nohaplotig	exon	19593774	19593992	100	-	.	Parent=FBgn0034136.1.mrna1;Target=FBgn0034136.1 110 328 +
Chr2	stalkie_big_nohaplotig	CDS	19584075	19584185	.	-	0	Parent=FBgn0034136.1.mrna1;Target=FBgn0034136.1 1897 2007 +
Chr2	stalkie_big_nohaplotig	CDS	19584254	19584522	.	-	2	Parent=FBgn0034136.1.mrna1;Target=FBgn0034136.1 1628 1896 +
Chr2	stalkie_big_nohaplotig	CDS	19584648	19584876	.	-	0	Parent=FBgn0034136.1.mrna1;Target=FBgn0034136.1 1399 1627 +
Chr2	stalkie_big_nohaplotig	CDS	19584984	19585221	.	-	1	Parent=FBgn0034136.1.mrna1;Target=FBgn0034136.1 1161 1398 +
Chr2	stalkie_big_nohaplotig	CDS	19585319	19585696	.	-	1	Parent=FBgn0034136.1.mrna1;Target=FBgn0034136.1 783 1160 +
Chr2	stalkie_big_nohaplotig	CDS	19585785	19585948	.	-	0	Parent=FBgn0034136.1.mrna1;Target=FBgn0034136.1 619 782 +
Chr2	stalkie_big_nohaplotig	CDS	19586014	19586168	.	-	2	Parent=FBgn0034136.1.mrna1;Target=FBgn0034136.1 464 618 +
Chr2	stalkie_big_nohaplotig	CDS	19586252	19586386	.	-	2	Parent=FBgn0034136.1.mrna1;Target=FBgn0034136.1 329 463 +
Chr2	stalkie_big_nohaplotig	CDS	19593774	19593990	.	-	0	Parent=FBgn0034136.1.mrna1;Target=FBgn0034136.1 112 328 +
Chr2	gffcl	locus	19607819	19608160	.	-	.	ID=RLOC_00015328;geneIDs=comp150649_c1_seq1.path1;transcripts=comp150649_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19607819	19608160	.	-	.	ID=comp150649_c1_seq1.mrna1;geneID=comp150649_c1_seq1.path1;Name=comp150649_c1_seq1;Dir=indeterminatecoverage=100.0;identity=89.8;matches=307;mismatches=35;indels=0;unknowns=0;Target=comp150649_c1_seq1 342 1 .;CDS_Target=comp150649_c1_seq1 340 2 .;locus=RLOC_00015328
Chr2	stalkie_big_nohaplotig	exon	19607819	19608160	89	-	.	Parent=comp150649_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19607821	19608159	.	-	0	Parent=comp150649_c1_seq1.mrna1
Chr2	gffcl	locus	19612448	19612714	.	-	.	ID=RLOC_00015329;geneIDs=comp144884_c0_seq1.path1;transcripts=comp144884_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19612448	19612714	.	-	.	ID=comp144884_c0_seq1.mrna1;geneID=comp144884_c0_seq1.path1;Name=comp144884_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=267;mismatches=0;indels=0;unknowns=0;Target=comp144884_c0_seq1 267 1 .;CDS_Target=comp144884_c0_seq1 180 1 .;locus=RLOC_00015329
Chr2	stalkie_big_nohaplotig	exon	19612448	19612714	100	-	.	Parent=comp144884_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19612535	19612714	.	-	0	Parent=comp144884_c0_seq1.mrna1
Chr2	gffcl	locus	19634073	19638105	.	+	.	ID=RLOC_00015330;geneIDs=comp145577_c0_seq1.path1;transcripts=comp145577_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19634073	19638105	.	+	.	ID=comp145577_c0_seq1.mrna1;geneID=comp145577_c0_seq1.path1;Name=comp145577_c0_seq1;Dir=sensecoverage=99.8;identity=99.8;matches=415;mismatches=0;indels=1;unknowns=0;Target=comp145577_c0_seq1 3 80 +;locus=RLOC_00015330
Chr2	stalkie_big_nohaplotig	exon	19634073	19634269	100	+	.	Parent=comp145577_c0_seq1.mrna1;Target=comp145577_c0_seq1 1 197 +
Chr2	stalkie_big_nohaplotig	exon	19637888	19638105	99	+	.	Parent=comp145577_c0_seq1.mrna1;Target=comp145577_c0_seq1 198 416 +
Chr2	stalkie_big_nohaplotig	CDS	19634075	19634152	.	+	0	Parent=comp145577_c0_seq1.mrna1
Chr2	gffcl	locus	19638448	19656901	.	+	.	ID=RLOC_00015331;geneIDs=FBgn0034137.1.path1;transcripts=FBgn0034137.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19638448	19656901	.	+	.	ID=FBgn0034137.1.mrna1;geneID=FBgn0034137.1.path1;Name=FBgn0034137.1;Dir=sensecoverage=100.0;identity=100.0;matches=2184;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015331
Chr2	stalkie_big_nohaplotig	exon	19638448	19638525	100	+	.	Parent=FBgn0034137.1.mrna1;Target=FBgn0034137.1 1 78 +
Chr2	stalkie_big_nohaplotig	exon	19641329	19641590	100	+	.	Parent=FBgn0034137.1.mrna1;Target=FBgn0034137.1 79 340 +
Chr2	stalkie_big_nohaplotig	exon	19641656	19641755	100	+	.	Parent=FBgn0034137.1.mrna1;Target=FBgn0034137.1 341 440 +
Chr2	stalkie_big_nohaplotig	exon	19641847	19641947	100	+	.	Parent=FBgn0034137.1.mrna1;Target=FBgn0034137.1 441 541 +
Chr2	stalkie_big_nohaplotig	exon	19655099	19655180	100	+	.	Parent=FBgn0034137.1.mrna1;Target=FBgn0034137.1 542 623 +
Chr2	stalkie_big_nohaplotig	exon	19655268	19655754	100	+	.	Parent=FBgn0034137.1.mrna1;Target=FBgn0034137.1 624 1110 +
Chr2	stalkie_big_nohaplotig	exon	19655828	19656901	100	+	.	Parent=FBgn0034137.1.mrna1;Target=FBgn0034137.1 1111 2184 +
Chr2	stalkie_big_nohaplotig	CDS	19638448	19638525	.	+	0	Parent=FBgn0034137.1.mrna1;Target=FBgn0034137.1 1 78 +
Chr2	stalkie_big_nohaplotig	CDS	19641329	19641590	.	+	0	Parent=FBgn0034137.1.mrna1;Target=FBgn0034137.1 79 340 +
Chr2	stalkie_big_nohaplotig	CDS	19641656	19641755	.	+	2	Parent=FBgn0034137.1.mrna1;Target=FBgn0034137.1 341 440 +
Chr2	stalkie_big_nohaplotig	CDS	19641847	19641947	.	+	1	Parent=FBgn0034137.1.mrna1;Target=FBgn0034137.1 441 541 +
Chr2	stalkie_big_nohaplotig	CDS	19655099	19655180	.	+	2	Parent=FBgn0034137.1.mrna1;Target=FBgn0034137.1 542 623 +
Chr2	stalkie_big_nohaplotig	CDS	19655268	19655754	.	+	1	Parent=FBgn0034137.1.mrna1;Target=FBgn0034137.1 624 1110 +
Chr2	stalkie_big_nohaplotig	CDS	19655828	19656901	.	+	0	Parent=FBgn0034137.1.mrna1;Target=FBgn0034137.1 1111 2184 +
Chr2	gffcl	locus	19639281	19640805	.	+	.	ID=RLOC_00015332;geneIDs=comp150626_c0_seq1.path1;transcripts=comp150626_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19639281	19640805	.	+	.	ID=comp150626_c0_seq1.mrna1;geneID=comp150626_c0_seq1.path1;Name=comp150626_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1521;mismatches=4;indels=3;unknowns=0;Target=comp150626_c0_seq1 1528 1 .;CDS_Target=comp150626_c0_seq1 646 506 .;locus=RLOC_00015332
Chr2	stalkie_big_nohaplotig	exon	19639281	19640805	99	+	.	Parent=comp150626_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19639783	19639923	.	+	0	Parent=comp150626_c0_seq1.mrna1
Chr2	gffcl	locus	19647228	19647494	.	+	.	ID=RLOC_00015333;geneIDs=comp144884_c0_seq1.path2;transcripts=comp144884_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	19647228	19647494	.	+	.	ID=comp144884_c0_seq1.mrna2;geneID=comp144884_c0_seq1.path2;Name=comp144884_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=265;mismatches=2;indels=0;unknowns=0;Target=comp144884_c0_seq1 267 1 .;CDS_Target=comp144884_c0_seq1 180 1 .;locus=RLOC_00015333
Chr2	stalkie_big_nohaplotig	exon	19647228	19647494	99	+	.	Parent=comp144884_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	19647228	19647407	.	+	0	Parent=comp144884_c0_seq1.mrna2
Chr2	gffcl	locus	19657058	19657942	.	-	.	ID=RLOC_00015335;geneIDs=comp150051_c0_seq1.path1;transcripts=comp150051_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19657058	19657942	.	-	.	ID=comp150051_c0_seq1.mrna1;geneID=comp150051_c0_seq1.path1;Name=comp150051_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=881;mismatches=1;indels=3;unknowns=0;Target=comp150051_c0_seq1 882 1 .;CDS_Target=comp150051_c0_seq1 61 2 .;locus=RLOC_00015335
Chr2	stalkie_big_nohaplotig	exon	19657058	19657942	99	-	.	Parent=comp150051_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19657882	19657941	.	-	0	Parent=comp150051_c0_seq1.mrna1
Chr2	gffcl	locus	19667139	19679812	.	-	.	ID=RLOC_00015337;geneIDs=FBgn0034618.1.path1;transcripts=FBgn0034618.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19667139	19679812	.	-	.	ID=FBgn0034618.1.mrna1;geneID=FBgn0034618.1.path1;Name=FBgn0034618.1;Dir=sensecoverage=100.0;identity=100.0;matches=5005;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015337
Chr2	stalkie_big_nohaplotig	exon	19667139	19667174	100	-	.	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 4972 5007 +
Chr2	stalkie_big_nohaplotig	exon	19667240	19667375	100	-	.	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 4836 4971 +
Chr2	stalkie_big_nohaplotig	exon	19667444	19667915	100	-	.	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 4364 4835 +
Chr2	stalkie_big_nohaplotig	exon	19667971	19668812	100	-	.	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 3522 4363 +
Chr2	stalkie_big_nohaplotig	exon	19668983	19669160	100	-	.	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 3344 3521 +
Chr2	stalkie_big_nohaplotig	exon	19669215	19669534	100	-	.	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 3024 3343 +
Chr2	stalkie_big_nohaplotig	exon	19669598	19670124	99	-	.	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 2497 3023 +
Chr2	stalkie_big_nohaplotig	exon	19670202	19671605	100	-	.	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 1093 2496 +
Chr2	stalkie_big_nohaplotig	exon	19671666	19672014	100	-	.	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 744 1092 +
Chr2	stalkie_big_nohaplotig	exon	19672073	19672244	100	-	.	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 572 743 +
Chr2	stalkie_big_nohaplotig	exon	19672298	19672514	100	-	.	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 355 571 +
Chr2	stalkie_big_nohaplotig	exon	19679459	19679812	100	-	.	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 1 354 +
Chr2	stalkie_big_nohaplotig	CDS	19667139	19667174	.	-	0	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 4972 5007 +
Chr2	stalkie_big_nohaplotig	CDS	19667240	19667375	.	-	1	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 4836 4971 +
Chr2	stalkie_big_nohaplotig	CDS	19667444	19667915	.	-	2	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 4364 4835 +
Chr2	stalkie_big_nohaplotig	CDS	19667971	19668812	.	-	1	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 3522 4363 +
Chr2	stalkie_big_nohaplotig	CDS	19668983	19669160	.	-	2	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 3344 3521 +
Chr2	stalkie_big_nohaplotig	CDS	19669215	19669534	.	-	1	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 3024 3343 +
Chr2	stalkie_big_nohaplotig	CDS	19669598	19670124	.	-	0	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 2497 3023 +
Chr2	stalkie_big_nohaplotig	CDS	19670202	19671605	.	-	0	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 1093 2496 +
Chr2	stalkie_big_nohaplotig	CDS	19671666	19672014	.	-	1	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 744 1092 +
Chr2	stalkie_big_nohaplotig	CDS	19672073	19672244	.	-	2	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 572 743 +
Chr2	stalkie_big_nohaplotig	CDS	19672298	19672514	.	-	0	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 355 571 +
Chr2	stalkie_big_nohaplotig	CDS	19679459	19679812	.	-	0	Parent=FBgn0034618.1.mrna1;Target=FBgn0034618.1 1 354 +
Chr2	gffcl	locus	19689036	19726796	.	-	.	ID=RLOC_00015338;geneIDs=FBgn0261554.1.path1,comp792097_c0_seq1.path1;transcripts=FBgn0261554.1.mrna1,comp792097_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19689036	19726796	.	-	.	ID=FBgn0261554.1.mrna1;geneID=FBgn0261554.1.path1;Name=FBgn0261554.1;Dir=sensecoverage=100.0;identity=100.0;matches=4778;mismatches=0;indels=1;unknowns=0;Target=FBgn0261554.1 105 197 +;locus=RLOC_00015338
Chr2	stalkie_big_nohaplotig	exon	19689036	19689229	100	-	.	Parent=FBgn0261554.1.mrna1;Target=FBgn0261554.1 4586 4779 +
Chr2	stalkie_big_nohaplotig	exon	19691685	19691978	100	-	.	Parent=FBgn0261554.1.mrna1;Target=FBgn0261554.1 4292 4585 +
Chr2	stalkie_big_nohaplotig	exon	19695209	19695317	100	-	.	Parent=FBgn0261554.1.mrna1;Target=FBgn0261554.1 4183 4291 +
Chr2	stalkie_big_nohaplotig	exon	19697054	19697269	100	-	.	Parent=FBgn0261554.1.mrna1;Target=FBgn0261554.1 3967 4182 +
Chr2	stalkie_big_nohaplotig	exon	19697334	19697504	100	-	.	Parent=FBgn0261554.1.mrna1;Target=FBgn0261554.1 3796 3966 +
Chr2	stalkie_big_nohaplotig	exon	19697575	19697813	100	-	.	Parent=FBgn0261554.1.mrna1;Target=FBgn0261554.1 3557 3795 +
Chr2	stalkie_big_nohaplotig	exon	19697874	19698052	100	-	.	Parent=FBgn0261554.1.mrna1;Target=FBgn0261554.1 3378 3556 +
Chr2	stalkie_big_nohaplotig	exon	19698119	19698284	100	-	.	Parent=FBgn0261554.1.mrna1;Target=FBgn0261554.1 3212 3377 +
Chr2	stalkie_big_nohaplotig	exon	19698346	19698985	100	-	.	Parent=FBgn0261554.1.mrna1;Target=FBgn0261554.1 2572 3211 +
Chr2	stalkie_big_nohaplotig	exon	19699047	19700564	100	-	.	Parent=FBgn0261554.1.mrna1;Target=FBgn0261554.1 1054 2571 +
Chr2	stalkie_big_nohaplotig	exon	19700628	19701068	100	-	.	Parent=FBgn0261554.1.mrna1;Target=FBgn0261554.1 613 1053 +
Chr2	stalkie_big_nohaplotig	exon	19701134	19701331	100	-	.	Parent=FBgn0261554.1.mrna1;Target=FBgn0261554.1 415 612 +
Chr2	stalkie_big_nohaplotig	exon	19701413	19701547	100	-	.	Parent=FBgn0261554.1.mrna1;Target=FBgn0261554.1 280 414 +
Chr2	stalkie_big_nohaplotig	exon	19726519	19726796	99	-	.	Parent=FBgn0261554.1.mrna1;Target=FBgn0261554.1 1 279 +
Chr2	stalkie_big_nohaplotig	CDS	19726601	19726692	.	-	0	Parent=FBgn0261554.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19701524	19709137	.	-	.	ID=comp792097_c0_seq1.mrna1;geneID=comp792097_c0_seq1.path1;Name=comp792097_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=254;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015338
Chr2	stalkie_big_nohaplotig	exon	19701524	19701547	100	-	.	Parent=comp792097_c0_seq1.mrna1;Target=comp792097_c0_seq1 231 254 +
Chr2	stalkie_big_nohaplotig	exon	19708908	19709137	100	-	.	Parent=comp792097_c0_seq1.mrna1;Target=comp792097_c0_seq1 1 230 +
Chr2	stalkie_big_nohaplotig	CDS	19701524	19701547	.	-	0	Parent=comp792097_c0_seq1.mrna1;Target=comp792097_c0_seq1 231 254 +
Chr2	stalkie_big_nohaplotig	CDS	19708908	19709003	.	-	0	Parent=comp792097_c0_seq1.mrna1;Target=comp792097_c0_seq1 135 230 +
Chr2	gffcl	locus	19689901	19690685	.	-	.	ID=RLOC_00015339;geneIDs=comp155000_c0_seq1.path1;transcripts=comp155000_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19689901	19690685	.	-	.	ID=comp155000_c0_seq1.mrna1;geneID=comp155000_c0_seq1.path1;Name=comp155000_c0_seq1;Dir=indeterminatecoverage=97.0;identity=99.0;matches=778;mismatches=7;indels=1;unknowns=0;Target=comp155000_c0_seq1 810 25 .;CDS_Target=comp155000_c0_seq1 175 26 .;locus=RLOC_00015339
Chr2	stalkie_big_nohaplotig	exon	19689901	19690685	98	-	.	Parent=comp155000_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19690536	19690684	.	-	0	Parent=comp155000_c0_seq1.mrna1
Chr2	gffcl	locus	19692892	19693423	.	+	.	ID=RLOC_00015340;geneIDs=comp151057_c0_seq1.path1;transcripts=comp151057_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19692892	19693423	.	+	.	ID=comp151057_c0_seq1.mrna1;geneID=comp151057_c0_seq1.path1;Name=comp151057_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=531;mismatches=1;indels=0;unknowns=0;Target=comp151057_c0_seq1 532 1 .;CDS_Target=comp151057_c0_seq1 144 49 .;locus=RLOC_00015340
Chr2	stalkie_big_nohaplotig	exon	19692892	19693423	99	+	.	Parent=comp151057_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19692940	19693035	.	+	0	Parent=comp151057_c0_seq1.mrna1
Chr2	gffcl	locus	19718152	19718837	.	+	.	ID=RLOC_00015341;geneIDs=comp141939_c0_seq1.path1;transcripts=comp141939_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19718152	19718837	.	+	.	ID=comp141939_c0_seq1.mrna1;geneID=comp141939_c0_seq1.path1;Name=comp141939_c0_seq1;Dir=indeterminatecoverage=93.6;identity=100.0;matches=686;mismatches=0;indels=0;unknowns=0;Target=comp141939_c0_seq1 709 24 .;CDS_Target=comp141939_c0_seq1 300 25 .;locus=RLOC_00015341
Chr2	stalkie_big_nohaplotig	exon	19718152	19718837	100	+	.	Parent=comp141939_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19718153	19718428	.	+	0	Parent=comp141939_c0_seq1.mrna1
Chr2	gffcl	locus	19744244	19745330	.	+	.	ID=RLOC_00015342;geneIDs=FBgn0034614.1.path1;transcripts=FBgn0034614.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19744244	19745330	.	+	.	ID=FBgn0034614.1.mrna1;geneID=FBgn0034614.1.path1;Name=FBgn0034614.1;Dir=sensecoverage=100.0;identity=100.0;matches=1023;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015342
Chr2	stalkie_big_nohaplotig	exon	19744244	19744493	100	+	.	Parent=FBgn0034614.1.mrna1;Target=FBgn0034614.1 1 250 +
Chr2	stalkie_big_nohaplotig	exon	19744558	19745330	100	+	.	Parent=FBgn0034614.1.mrna1;Target=FBgn0034614.1 251 1023 +
Chr2	stalkie_big_nohaplotig	CDS	19744244	19744493	.	+	0	Parent=FBgn0034614.1.mrna1;Target=FBgn0034614.1 1 250 +
Chr2	stalkie_big_nohaplotig	CDS	19744558	19745330	.	+	2	Parent=FBgn0034614.1.mrna1;Target=FBgn0034614.1 251 1023 +
Chr2	gffcl	locus	19745538	19745835	.	-	.	ID=RLOC_00015343;geneIDs=FBgn0016726.1.path1;transcripts=FBgn0016726.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19745538	19745835	.	-	.	ID=FBgn0016726.1.mrna1;geneID=FBgn0016726.1.path1;Name=FBgn0016726.1;Dir=sensecoverage=100.0;identity=100.0;matches=234;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015343
Chr2	stalkie_big_nohaplotig	exon	19745538	19745663	100	-	.	Parent=FBgn0016726.1.mrna1;Target=FBgn0016726.1 109 234 +
Chr2	stalkie_big_nohaplotig	exon	19745728	19745835	100	-	.	Parent=FBgn0016726.1.mrna1;Target=FBgn0016726.1 1 108 +
Chr2	stalkie_big_nohaplotig	CDS	19745538	19745663	.	-	0	Parent=FBgn0016726.1.mrna1;Target=FBgn0016726.1 109 234 +
Chr2	stalkie_big_nohaplotig	CDS	19745728	19745835	.	-	0	Parent=FBgn0016726.1.mrna1;Target=FBgn0016726.1 1 108 +
Chr2	gffcl	locus	19760666	19762078	.	+	.	ID=RLOC_00015345;geneIDs=comp156432_c0_seq1.path1;transcripts=comp156432_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19760666	19762078	.	+	.	ID=comp156432_c0_seq1.mrna1;geneID=comp156432_c0_seq1.path1;Name=comp156432_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1413;mismatches=0;indels=0;unknowns=0;Target=comp156432_c0_seq1 1413 1 .;CDS_Target=comp156432_c0_seq1 932 771 .;locus=RLOC_00015345
Chr2	stalkie_big_nohaplotig	exon	19760666	19762078	100	+	.	Parent=comp156432_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19761436	19761597	.	+	0	Parent=comp156432_c0_seq1.mrna1
Chr2	gffcl	locus	19762720	19764128	.	+	.	ID=RLOC_00015346;geneIDs=comp158876_c0_seq1.path1;transcripts=comp158876_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19762720	19764128	.	+	.	ID=comp158876_c0_seq1.mrna1;geneID=comp158876_c0_seq1.path1;Name=comp158876_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.5;matches=1402;mismatches=1;indels=6;unknowns=0;Target=comp158876_c0_seq1 1403 1 .;CDS_Target=comp158876_c0_seq1 812 660 .;locus=RLOC_00015346
Chr2	stalkie_big_nohaplotig	exon	19762720	19764128	99	+	.	Parent=comp158876_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19763379	19763531	.	+	0	Parent=comp158876_c0_seq1.mrna1
Chr2	gffcl	locus	19766428	19770278	.	-	.	ID=RLOC_00015347;geneIDs=FBgn0028985.1.path1,comp97054_c0_seq1.path1,comp149519_c0_seq1.path1;transcripts=FBgn0028985.1.mrna1,comp97054_c0_seq1.mrna1,comp149519_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19766428	19768355	.	-	.	ID=FBgn0028985.1.mrna1;geneID=FBgn0028985.1.path1;Name=FBgn0028985.1;Dir=sensecoverage=96.5;identity=100.0;matches=1271;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015347
Chr2	stalkie_big_nohaplotig	exon	19766428	19766627	100	-	.	Parent=FBgn0028985.1.mrna1;Target=FBgn0028985.1 1118 1317 +
Chr2	stalkie_big_nohaplotig	exon	19766784	19766925	100	-	.	Parent=FBgn0028985.1.mrna1;Target=FBgn0028985.1 976 1117 +
Chr2	stalkie_big_nohaplotig	exon	19767427	19768355	100	-	.	Parent=FBgn0028985.1.mrna1;Target=FBgn0028985.1 47 975 +
Chr2	stalkie_big_nohaplotig	CDS	19766428	19766627	.	-	2	Parent=FBgn0028985.1.mrna1;Target=FBgn0028985.1 1118 1317 +
Chr2	stalkie_big_nohaplotig	CDS	19766784	19766925	.	-	0	Parent=FBgn0028985.1.mrna1;Target=FBgn0028985.1 976 1117 +
Chr2	stalkie_big_nohaplotig	CDS	19767427	19768353	.	-	0	Parent=FBgn0028985.1.mrna1;Target=FBgn0028985.1 49 975 +
Chr2	stalkie_big_nohaplotig	mRNA	19768332	19770278	.	-	.	ID=comp97054_c0_seq1.mrna1;geneID=comp97054_c0_seq1.path1;Name=comp97054_c0_seq1;Dir=antisensecoverage=7.5;identity=100.0;matches=55;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015347
Chr2	stalkie_big_nohaplotig	exon	19768332	19768355	100	-	.	Parent=comp97054_c0_seq1.mrna1;Target=comp97054_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	exon	19770248	19770278	100	-	.	Parent=comp97054_c0_seq1.mrna1;Target=comp97054_c0_seq1 25 55 -
Chr2	stalkie_big_nohaplotig	mRNA	19768335	19769997	.	-	.	ID=comp149519_c0_seq1.mrna1;geneID=comp149519_c0_seq1.path1;Name=comp149519_c0_seq1;Dir=antisensecoverage=100.0;identity=98.7;matches=1184;mismatches=13;indels=2;unknowns=0;Target=comp149519_c0_seq1 601 738 .;locus=RLOC_00015347
Chr2	stalkie_big_nohaplotig	exon	19768335	19768355	100	-	.	Parent=comp149519_c0_seq1.mrna1;Target=comp149519_c0_seq1 1 21 -
Chr2	stalkie_big_nohaplotig	exon	19768800	19769526	99	-	.	Parent=comp149519_c0_seq1.mrna1;Target=comp149519_c0_seq1 22 749 -
Chr2	stalkie_big_nohaplotig	exon	19769549	19769997	98	-	.	Parent=comp149519_c0_seq1.mrna1;Target=comp149519_c0_seq1 759 1208 -
Chr2	stalkie_big_nohaplotig	CDS	19769379	19769515	.	-	0	Parent=comp149519_c0_seq1.mrna1
Chr2	gffcl	locus	19770290	19770858	.	-	.	ID=RLOC_00015348;geneIDs=comp934793_c0_seq1.path1;transcripts=comp934793_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19770290	19770858	.	-	.	ID=comp934793_c0_seq1.mrna1;geneID=comp934793_c0_seq1.path1;Name=comp934793_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=569;mismatches=0;indels=0;unknowns=0;Target=comp934793_c0_seq1 569 1 .;CDS_Target=comp934793_c0_seq1 310 155 .;locus=RLOC_00015348
Chr2	stalkie_big_nohaplotig	exon	19770290	19770858	100	-	.	Parent=comp934793_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19770549	19770704	.	-	0	Parent=comp934793_c0_seq1.mrna1
Chr2	gffcl	locus	19771108	19771440	.	+	.	ID=RLOC_00015349;geneIDs=comp141996_c0_seq1.path1;transcripts=comp141996_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19771108	19771440	.	+	.	ID=comp141996_c0_seq1.mrna1;geneID=comp141996_c0_seq1.path1;Name=comp141996_c0_seq1;Dir=indeterminatecoverage=93.5;identity=100.0;matches=333;mismatches=0;indels=0;unknowns=0;Target=comp141996_c0_seq1 333 1 .;CDS_Target=comp141996_c0_seq1 245 108 .;locus=RLOC_00015349
Chr2	stalkie_big_nohaplotig	exon	19771108	19771440	100	+	.	Parent=comp141996_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19771215	19771352	.	+	0	Parent=comp141996_c0_seq1.mrna1
Chr2	gffcl	locus	19774099	19774639	.	+	.	ID=RLOC_00015350;geneIDs=comp157442_c4_seq1.path2;transcripts=comp157442_c4_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	19774099	19774639	.	+	.	ID=comp157442_c4_seq1.mrna2;geneID=comp157442_c4_seq1.path2;Name=comp157442_c4_seq1;Dir=antisensecoverage=26.1;identity=97.2;matches=456;mismatches=12;indels=1;unknowns=0;locus=RLOC_00015350
Chr2	stalkie_big_nohaplotig	exon	19774099	19774363	96	+	.	Parent=comp157442_c4_seq1.mrna2;Target=comp157442_c4_seq1 1535 1800 -
Chr2	stalkie_big_nohaplotig	exon	19774437	19774639	98	+	.	Parent=comp157442_c4_seq1.mrna2;Target=comp157442_c4_seq1 1332 1534 -
Chr2	gffcl	locus	19780904	19784425	.	+	.	ID=RLOC_00015351;geneIDs=FBgn0033113.2.path1;transcripts=FBgn0033113.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19780904	19784425	.	+	.	ID=FBgn0033113.2.mrna1;geneID=FBgn0033113.2.path1;Name=FBgn0033113.2;Dir=sensecoverage=98.9;identity=100.0;matches=1047;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015351
Chr2	stalkie_big_nohaplotig	exon	19780904	19780967	100	+	.	Parent=FBgn0033113.2.mrna1;Target=FBgn0033113.2 1 64 +
Chr2	stalkie_big_nohaplotig	exon	19783377	19784287	100	+	.	Parent=FBgn0033113.2.mrna1;Target=FBgn0033113.2 65 975 +
Chr2	stalkie_big_nohaplotig	exon	19784354	19784425	100	+	.	Parent=FBgn0033113.2.mrna1;Target=FBgn0033113.2 976 1047 +
Chr2	stalkie_big_nohaplotig	CDS	19780904	19780967	.	+	0	Parent=FBgn0033113.2.mrna1;Target=FBgn0033113.2 1 64 +
Chr2	stalkie_big_nohaplotig	CDS	19783377	19784287	.	+	2	Parent=FBgn0033113.2.mrna1;Target=FBgn0033113.2 65 975 +
Chr2	stalkie_big_nohaplotig	CDS	19784354	19784425	.	+	0	Parent=FBgn0033113.2.mrna1;Target=FBgn0033113.2 976 1047 +
Chr2	gffcl	locus	19788323	19789765	.	+	.	ID=RLOC_00015352;geneIDs=FBgn0033113.1.path1;transcripts=FBgn0033113.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19788323	19789765	.	+	.	ID=FBgn0033113.1.mrna1;geneID=FBgn0033113.1.path1;Name=FBgn0033113.1;Dir=sensecoverage=100.0;identity=100.0;matches=1245;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015352
Chr2	stalkie_big_nohaplotig	exon	19788323	19788380	100	+	.	Parent=FBgn0033113.1.mrna1;Target=FBgn0033113.1 1 58 +
Chr2	stalkie_big_nohaplotig	exon	19788449	19789371	100	+	.	Parent=FBgn0033113.1.mrna1;Target=FBgn0033113.1 59 981 +
Chr2	stalkie_big_nohaplotig	exon	19789434	19789575	100	+	.	Parent=FBgn0033113.1.mrna1;Target=FBgn0033113.1 982 1123 +
Chr2	stalkie_big_nohaplotig	exon	19789644	19789765	100	+	.	Parent=FBgn0033113.1.mrna1;Target=FBgn0033113.1 1124 1245 +
Chr2	stalkie_big_nohaplotig	CDS	19788323	19788380	.	+	0	Parent=FBgn0033113.1.mrna1;Target=FBgn0033113.1 1 58 +
Chr2	stalkie_big_nohaplotig	CDS	19788449	19789371	.	+	2	Parent=FBgn0033113.1.mrna1;Target=FBgn0033113.1 59 981 +
Chr2	stalkie_big_nohaplotig	CDS	19789434	19789575	.	+	0	Parent=FBgn0033113.1.mrna1;Target=FBgn0033113.1 982 1123 +
Chr2	stalkie_big_nohaplotig	CDS	19789644	19789765	.	+	2	Parent=FBgn0033113.1.mrna1;Target=FBgn0033113.1 1124 1245 +
Chr2	gffcl	locus	19836807	19838078	.	+	.	ID=RLOC_00015353;geneIDs=ORF1009.path1;transcripts=ORF1009.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19836807	19838078	.	+	.	ID=ORF1009.mrna1;geneID=ORF1009.path1;Name=ORF1009;Dir=indeterminatecoverage=99.4;identity=99.5;matches=1267;mismatches=5;indels=1;unknowns=0;Target=ORF1009 1281 9 .;CDS_Target=ORF1009 1281 109 .;locus=RLOC_00015353
Chr2	stalkie_big_nohaplotig	exon	19836807	19838078	99	+	.	Parent=ORF1009.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19836906	19838078	.	+	0	Parent=ORF1009.mrna1
Chr2	gffcl	locus	19846264	19847100	.	+	.	ID=RLOC_00015354;geneIDs=ORF2580.path1;transcripts=ORF2580.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19846264	19847100	.	+	.	ID=ORF2580.mrna1;geneID=ORF2580.path1;Name=ORF2580;Dir=indeterminatecoverage=100.0;identity=99.6;matches=834;mismatches=3;indels=0;unknowns=0;Target=ORF2580 837 1 .;locus=RLOC_00015354
Chr2	stalkie_big_nohaplotig	exon	19846264	19847100	99	+	.	Parent=ORF2580.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19846264	19847100	.	+	0	Parent=ORF2580.mrna1
Chr2	gffcl	locus	19907588	19908035	.	-	.	ID=RLOC_00015355;geneIDs=comp63327_c0_seq1.path1;transcripts=comp63327_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19907588	19908035	.	-	.	ID=comp63327_c0_seq1.mrna1;geneID=comp63327_c0_seq1.path1;Name=comp63327_c0_seq1;Dir=indeterminatecoverage=95.5;identity=99.6;matches=446;mismatches=2;indels=0;unknowns=0;Target=comp63327_c0_seq1 462 15 .;CDS_Target=comp63327_c0_seq1 374 285 .;locus=RLOC_00015355
Chr2	stalkie_big_nohaplotig	exon	19907588	19908035	99	-	.	Parent=comp63327_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19907676	19907765	.	-	0	Parent=comp63327_c0_seq1.mrna1
Chr2	gffcl	locus	19912823	19913377	.	+	.	ID=RLOC_00015356;geneIDs=FBgn0260939.2.path1;transcripts=FBgn0260939.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19912823	19913377	.	+	.	ID=FBgn0260939.2.mrna1;geneID=FBgn0260939.2.path1;Name=FBgn0260939.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=555;mismatches=0;indels=0;unknowns=0;Target=FBgn0260939.2 555 1 .;locus=RLOC_00015356
Chr2	stalkie_big_nohaplotig	exon	19912823	19913377	100	+	.	Parent=FBgn0260939.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19912823	19913377	.	+	0	Parent=FBgn0260939.2.mrna1
Chr2	gffcl	locus	19914037	19915119	.	+	.	ID=RLOC_00015357;geneIDs=FBgn0033117.1.path1;transcripts=FBgn0033117.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19914037	19915119	.	+	.	ID=FBgn0033117.1.mrna1;geneID=FBgn0033117.1.path1;Name=FBgn0033117.1;Dir=sensecoverage=100.0;identity=100.0;matches=909;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015357
Chr2	stalkie_big_nohaplotig	exon	19914037	19914058	100	+	.	Parent=FBgn0033117.1.mrna1;Target=FBgn0033117.1 1 22 +
Chr2	stalkie_big_nohaplotig	exon	19914121	19914300	100	+	.	Parent=FBgn0033117.1.mrna1;Target=FBgn0033117.1 23 202 +
Chr2	stalkie_big_nohaplotig	exon	19914359	19914959	100	+	.	Parent=FBgn0033117.1.mrna1;Target=FBgn0033117.1 203 803 +
Chr2	stalkie_big_nohaplotig	exon	19915014	19915119	100	+	.	Parent=FBgn0033117.1.mrna1;Target=FBgn0033117.1 804 909 +
Chr2	stalkie_big_nohaplotig	CDS	19914037	19914058	.	+	0	Parent=FBgn0033117.1.mrna1;Target=FBgn0033117.1 1 22 +
Chr2	stalkie_big_nohaplotig	CDS	19914121	19914300	.	+	2	Parent=FBgn0033117.1.mrna1;Target=FBgn0033117.1 23 202 +
Chr2	stalkie_big_nohaplotig	CDS	19914359	19914959	.	+	2	Parent=FBgn0033117.1.mrna1;Target=FBgn0033117.1 203 803 +
Chr2	stalkie_big_nohaplotig	CDS	19915014	19915119	.	+	1	Parent=FBgn0033117.1.mrna1;Target=FBgn0033117.1 804 909 +
Chr2	gffcl	locus	19917435	19917812	.	+	.	ID=RLOC_00015358;geneIDs=comp149252_c0_seq1.path1;transcripts=comp149252_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19917435	19917812	.	+	.	ID=comp149252_c0_seq1.mrna1;geneID=comp149252_c0_seq1.path1;Name=comp149252_c0_seq1;Dir=indeterminatecoverage=87.9;identity=93.8;matches=362;mismatches=9;indels=15;unknowns=0;Target=comp149252_c0_seq1 379 1 .;CDS_Target=comp149252_c0_seq1 45 1 .;locus=RLOC_00015358
Chr2	stalkie_big_nohaplotig	exon	19917435	19917812	93	+	.	Parent=comp149252_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19917435	19917479	.	+	0	Parent=comp149252_c0_seq1.mrna1
Chr2	gffcl	locus	19928376	19928944	.	+	.	ID=RLOC_00015359;geneIDs=comp150785_c0_seq1.path1;transcripts=comp150785_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19928376	19928944	.	+	.	ID=comp150785_c0_seq1.mrna1;geneID=comp150785_c0_seq1.path1;Name=comp150785_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.3;matches=565;mismatches=4;indels=6;unknowns=0;Target=comp150785_c0_seq1 575 1 .;CDS_Target=comp150785_c0_seq1 113 30 .;locus=RLOC_00015359
Chr2	stalkie_big_nohaplotig	exon	19928376	19928944	98	+	.	Parent=comp150785_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	19928405	19928488	.	+	0	Parent=comp150785_c0_seq1.mrna1
Chr2	gffcl	locus	19936162	19995077	.	-	.	ID=RLOC_00015360;geneIDs=comp160344_c6_seq1.path2;transcripts=comp160344_c6_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	19936162	19995077	.	-	.	ID=comp160344_c6_seq1.mrna2;geneID=comp160344_c6_seq1.path2;Name=comp160344_c6_seq1;Dir=antisensecoverage=24.2;identity=100.0;matches=1329;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015360
Chr2	stalkie_big_nohaplotig	exon	19936162	19936353	100	-	.	Parent=comp160344_c6_seq1.mrna2;Target=comp160344_c6_seq1 4095 4286 -
Chr2	stalkie_big_nohaplotig	exon	19936416	19936751	100	-	.	Parent=comp160344_c6_seq1.mrna2;Target=comp160344_c6_seq1 4287 4622 -
Chr2	stalkie_big_nohaplotig	exon	19936825	19936943	100	-	.	Parent=comp160344_c6_seq1.mrna2;Target=comp160344_c6_seq1 4623 4741 -
Chr2	stalkie_big_nohaplotig	exon	19940518	19940591	100	-	.	Parent=comp160344_c6_seq1.mrna2;Target=comp160344_c6_seq1 4742 4815 -
Chr2	stalkie_big_nohaplotig	exon	19943921	19943982	100	-	.	Parent=comp160344_c6_seq1.mrna2;Target=comp160344_c6_seq1 4816 4877 -
Chr2	stalkie_big_nohaplotig	exon	19994532	19995077	100	-	.	Parent=comp160344_c6_seq1.mrna2;Target=comp160344_c6_seq1 4878 5423 -
Chr2	gffcl	locus	19946881	19948012	.	+	.	ID=RLOC_00015361;geneIDs=comp156165_c0_seq1.path1;transcripts=comp156165_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	19946881	19948012	.	+	.	ID=comp156165_c0_seq1.mrna1;geneID=comp156165_c0_seq1.path1;Name=comp156165_c0_seq1;Dir=antisensecoverage=99.8;identity=99.3;matches=870;mismatches=6;indels=0;unknowns=0;locus=RLOC_00015361
Chr2	stalkie_big_nohaplotig	exon	19946881	19946980	99	+	.	Parent=comp156165_c0_seq1.mrna1;Target=comp156165_c0_seq1 779 878 -
Chr2	stalkie_big_nohaplotig	exon	19947173	19947629	99	+	.	Parent=comp156165_c0_seq1.mrna1;Target=comp156165_c0_seq1 322 778 -
Chr2	stalkie_big_nohaplotig	exon	19947694	19948012	99	+	.	Parent=comp156165_c0_seq1.mrna1;Target=comp156165_c0_seq1 3 321 -
Chr2	stalkie_big_nohaplotig	CDS	19947280	19947629	.	+	0	Parent=comp156165_c0_seq1.mrna1;Target=comp156165_c0_seq1 322 671 .
Chr2	stalkie_big_nohaplotig	CDS	19947694	19947916	.	+	1	Parent=comp156165_c0_seq1.mrna1;Target=comp156165_c0_seq1 99 321 .
Chr2	gffcl	locus	20013462	20564922	.	+	.	ID=RLOC_00015362;geneIDs=comp129114_c0_seq1.path1;transcripts=comp129114_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20013462	20564922	.	+	.	ID=comp129114_c0_seq1.mrna1;geneID=comp129114_c0_seq1.path1;Name=comp129114_c0_seq1;Dir=indeterminatecoverage=74.5;identity=100.0;matches=423;mismatches=0;indels=0;unknowns=0;Target=comp129114_c0_seq1 387 352 .;locus=RLOC_00015362
Chr2	stalkie_big_nohaplotig	exon	20013462	20013469	100	+	.	Parent=comp129114_c0_seq1.mrna1;Target=comp129114_c0_seq1 153 146 .
Chr2	stalkie_big_nohaplotig	exon	20017558	20017561	100	+	.	Parent=comp129114_c0_seq1.mrna1;Target=comp129114_c0_seq1 157 154 .
Chr2	stalkie_big_nohaplotig	exon	20021469	20021470	100	+	.	Parent=comp129114_c0_seq1.mrna1;Target=comp129114_c0_seq1 159 158 .
Chr2	stalkie_big_nohaplotig	exon	20027600	20027607	100	+	.	Parent=comp129114_c0_seq1.mrna1;Target=comp129114_c0_seq1 167 160 .
Chr2	stalkie_big_nohaplotig	exon	20564522	20564922	100	+	.	Parent=comp129114_c0_seq1.mrna1;Target=comp129114_c0_seq1 568 168 .
Chr2	stalkie_big_nohaplotig	CDS	20564706	20564741	.	+	0	Parent=comp129114_c0_seq1.mrna1
Chr2	gffcl	locus	20023004	20024585	.	-	.	ID=RLOC_00015363;geneIDs=FBgn0033121.1.path1;transcripts=FBgn0033121.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20023004	20024585	.	-	.	ID=FBgn0033121.1.mrna1;geneID=FBgn0033121.1.path1;Name=FBgn0033121.1;Dir=sensecoverage=100.0;identity=99.7;matches=1510;mismatches=5;indels=0;unknowns=0;locus=RLOC_00015363
Chr2	stalkie_big_nohaplotig	exon	20023004	20023425	100	-	.	Parent=FBgn0033121.1.mrna1;Target=FBgn0033121.1 1094 1515 +
Chr2	stalkie_big_nohaplotig	exon	20023493	20024585	99	-	.	Parent=FBgn0033121.1.mrna1;Target=FBgn0033121.1 1 1093 +
Chr2	stalkie_big_nohaplotig	CDS	20023004	20023425	.	-	2	Parent=FBgn0033121.1.mrna1;Target=FBgn0033121.1 1094 1515 +
Chr2	stalkie_big_nohaplotig	CDS	20023493	20024585	.	-	0	Parent=FBgn0033121.1.mrna1;Target=FBgn0033121.1 1 1093 +
Chr2	gffcl	locus	20025028	20025848	.	-	.	ID=RLOC_00015364;geneIDs=FBgn0050157.1.path1;transcripts=FBgn0050157.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20025028	20025848	.	-	.	ID=FBgn0050157.1.mrna1;geneID=FBgn0050157.1.path1;Name=FBgn0050157.1;Dir=sensecoverage=100.0;identity=100.0;matches=702;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015364
Chr2	stalkie_big_nohaplotig	exon	20025028	20025153	100	-	.	Parent=FBgn0050157.1.mrna1;Target=FBgn0050157.1 577 702 +
Chr2	stalkie_big_nohaplotig	exon	20025213	20025598	100	-	.	Parent=FBgn0050157.1.mrna1;Target=FBgn0050157.1 191 576 +
Chr2	stalkie_big_nohaplotig	exon	20025659	20025848	100	-	.	Parent=FBgn0050157.1.mrna1;Target=FBgn0050157.1 1 190 +
Chr2	stalkie_big_nohaplotig	CDS	20025028	20025153	.	-	0	Parent=FBgn0050157.1.mrna1;Target=FBgn0050157.1 577 702 +
Chr2	stalkie_big_nohaplotig	CDS	20025213	20025598	.	-	2	Parent=FBgn0050157.1.mrna1;Target=FBgn0050157.1 191 576 +
Chr2	stalkie_big_nohaplotig	CDS	20025659	20025848	.	-	0	Parent=FBgn0050157.1.mrna1;Target=FBgn0050157.1 1 190 +
Chr2	gffcl	locus	20028478	20029185	.	+	.	ID=RLOC_00015365;geneIDs=comp148915_c0_seq1.path1;transcripts=comp148915_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20028478	20029185	.	+	.	ID=comp148915_c0_seq1.mrna1;geneID=comp148915_c0_seq1.path1;Name=comp148915_c0_seq1;Dir=indeterminatecoverage=54.3;identity=99.9;matches=707;mismatches=1;indels=0;unknowns=0;Target=comp148915_c0_seq1 718 11 .;CDS_Target=comp148915_c0_seq1 321 184 .;locus=RLOC_00015365
Chr2	stalkie_big_nohaplotig	exon	20028478	20029185	99	+	.	Parent=comp148915_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	20028651	20028788	.	+	0	Parent=comp148915_c0_seq1.mrna1
Chr2	gffcl	locus	20031404	20064815	.	-	.	ID=RLOC_00015366;geneIDs=FBgn0033463.1.path1;transcripts=FBgn0033463.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20031404	20064815	.	-	.	ID=FBgn0033463.1.mrna1;geneID=FBgn0033463.1.path1;Name=FBgn0033463.1;Dir=sensecoverage=100.0;identity=100.0;matches=2283;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015366
Chr2	stalkie_big_nohaplotig	exon	20031404	20031487	100	-	.	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 2200 2283 +
Chr2	stalkie_big_nohaplotig	exon	20031661	20031766	100	-	.	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 2094 2199 +
Chr2	stalkie_big_nohaplotig	exon	20031866	20031987	100	-	.	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 1972 2093 +
Chr2	stalkie_big_nohaplotig	exon	20032651	20032737	100	-	.	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 1885 1971 +
Chr2	stalkie_big_nohaplotig	exon	20032802	20032937	100	-	.	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 1749 1884 +
Chr2	stalkie_big_nohaplotig	exon	20033280	20033454	100	-	.	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 1574 1748 +
Chr2	stalkie_big_nohaplotig	exon	20033513	20033614	100	-	.	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 1472 1573 +
Chr2	stalkie_big_nohaplotig	exon	20034215	20034366	100	-	.	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 1320 1471 +
Chr2	stalkie_big_nohaplotig	exon	20034434	20034862	100	-	.	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 891 1319 +
Chr2	stalkie_big_nohaplotig	exon	20045892	20046006	100	-	.	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 776 890 +
Chr2	stalkie_big_nohaplotig	exon	20049657	20049873	100	-	.	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 559 775 +
Chr2	stalkie_big_nohaplotig	exon	20051791	20051868	100	-	.	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 481 558 +
Chr2	stalkie_big_nohaplotig	exon	20051940	20052158	100	-	.	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 262 480 +
Chr2	stalkie_big_nohaplotig	exon	20052493	20052621	100	-	.	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 133 261 +
Chr2	stalkie_big_nohaplotig	exon	20064684	20064815	100	-	.	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 1 132 +
Chr2	stalkie_big_nohaplotig	CDS	20031404	20031487	.	-	0	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 2200 2283 +
Chr2	stalkie_big_nohaplotig	CDS	20031661	20031766	.	-	1	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 2094 2199 +
Chr2	stalkie_big_nohaplotig	CDS	20031866	20031987	.	-	0	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 1972 2093 +
Chr2	stalkie_big_nohaplotig	CDS	20032651	20032737	.	-	0	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 1885 1971 +
Chr2	stalkie_big_nohaplotig	CDS	20032802	20032937	.	-	1	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 1749 1884 +
Chr2	stalkie_big_nohaplotig	CDS	20033280	20033454	.	-	2	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 1574 1748 +
Chr2	stalkie_big_nohaplotig	CDS	20033513	20033614	.	-	2	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 1472 1573 +
Chr2	stalkie_big_nohaplotig	CDS	20034215	20034366	.	-	1	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 1320 1471 +
Chr2	stalkie_big_nohaplotig	CDS	20034434	20034862	.	-	1	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 891 1319 +
Chr2	stalkie_big_nohaplotig	CDS	20045892	20046006	.	-	2	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 776 890 +
Chr2	stalkie_big_nohaplotig	CDS	20049657	20049873	.	-	0	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 559 775 +
Chr2	stalkie_big_nohaplotig	CDS	20051791	20051868	.	-	0	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 481 558 +
Chr2	stalkie_big_nohaplotig	CDS	20051940	20052158	.	-	0	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 262 480 +
Chr2	stalkie_big_nohaplotig	CDS	20052493	20052621	.	-	0	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 133 261 +
Chr2	stalkie_big_nohaplotig	CDS	20064684	20064815	.	-	0	Parent=FBgn0033463.1.mrna1;Target=FBgn0033463.1 1 132 +
Chr2	gffcl	locus	20032133	20032551	.	-	.	ID=RLOC_00015367;geneIDs=comp140553_c0_seq1.path1;transcripts=comp140553_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20032133	20032551	.	-	.	ID=comp140553_c0_seq1.mrna1;geneID=comp140553_c0_seq1.path1;Name=comp140553_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.4;matches=405;mismatches=2;indels=13;unknowns=0;Target=comp140553_c0_seq1 408 1 .;CDS_Target=comp140553_c0_seq1 169 56 .;locus=RLOC_00015367
Chr2	stalkie_big_nohaplotig	exon	20032133	20032551	96	-	.	Parent=comp140553_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	20032383	20032496	.	-	0	Parent=comp140553_c0_seq1.mrna1
Chr2	gffcl	locus	20057992	20061578	.	+	.	ID=RLOC_00015369;geneIDs=FBgn0050008.1.path1;transcripts=FBgn0050008.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20057992	20061578	.	+	.	ID=FBgn0050008.1.mrna1;geneID=FBgn0050008.1.path1;Name=FBgn0050008.1;Dir=sensecoverage=100.0;identity=99.6;matches=762;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015369
Chr2	stalkie_big_nohaplotig	exon	20057992	20058031	100	+	.	Parent=FBgn0050008.1.mrna1;Target=FBgn0050008.1 1 40 +
Chr2	stalkie_big_nohaplotig	exon	20058102	20058198	100	+	.	Parent=FBgn0050008.1.mrna1;Target=FBgn0050008.1 41 137 +
Chr2	stalkie_big_nohaplotig	exon	20060334	20060427	100	+	.	Parent=FBgn0050008.1.mrna1;Target=FBgn0050008.1 138 231 +
Chr2	stalkie_big_nohaplotig	exon	20060987	20061230	100	+	.	Parent=FBgn0050008.1.mrna1;Target=FBgn0050008.1 232 475 +
Chr2	stalkie_big_nohaplotig	exon	20061289	20061578	98	+	.	Parent=FBgn0050008.1.mrna1;Target=FBgn0050008.1 476 765 +
Chr2	stalkie_big_nohaplotig	CDS	20057992	20058031	.	+	0	Parent=FBgn0050008.1.mrna1;Target=FBgn0050008.1 1 40 +
Chr2	stalkie_big_nohaplotig	CDS	20058102	20058198	.	+	2	Parent=FBgn0050008.1.mrna1;Target=FBgn0050008.1 41 137 +
Chr2	stalkie_big_nohaplotig	CDS	20060334	20060427	.	+	1	Parent=FBgn0050008.1.mrna1;Target=FBgn0050008.1 138 231 +
Chr2	stalkie_big_nohaplotig	CDS	20060987	20061230	.	+	0	Parent=FBgn0050008.1.mrna1;Target=FBgn0050008.1 232 475 +
Chr2	stalkie_big_nohaplotig	CDS	20061289	20061578	.	+	2	Parent=FBgn0050008.1.mrna1;Target=FBgn0050008.1 476 765 +
Chr2	gffcl	locus	20069124	20072784	.	-	.	ID=RLOC_00015370;geneIDs=FBgn0033464.1.path1;transcripts=FBgn0033464.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20069124	20072784	.	-	.	ID=FBgn0033464.1.mrna1;geneID=FBgn0033464.1.path1;Name=FBgn0033464.1;Dir=sensecoverage=96.8;identity=100.0;matches=1629;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015370
Chr2	stalkie_big_nohaplotig	exon	20069124	20069247	100	-	.	Parent=FBgn0033464.1.mrna1;Target=FBgn0033464.1 1560 1683 +
Chr2	stalkie_big_nohaplotig	exon	20069301	20069558	100	-	.	Parent=FBgn0033464.1.mrna1;Target=FBgn0033464.1 1302 1559 +
Chr2	stalkie_big_nohaplotig	exon	20069619	20070404	100	-	.	Parent=FBgn0033464.1.mrna1;Target=FBgn0033464.1 516 1301 +
Chr2	stalkie_big_nohaplotig	exon	20071026	20071189	100	-	.	Parent=FBgn0033464.1.mrna1;Target=FBgn0033464.1 352 515 +
Chr2	stalkie_big_nohaplotig	exon	20072321	20072414	100	-	.	Parent=FBgn0033464.1.mrna1;Target=FBgn0033464.1 258 351 +
Chr2	stalkie_big_nohaplotig	exon	20072582	20072784	100	-	.	Parent=FBgn0033464.1.mrna1;Target=FBgn0033464.1 55 257 +
Chr2	stalkie_big_nohaplotig	CDS	20069124	20069247	.	-	1	Parent=FBgn0033464.1.mrna1;Target=FBgn0033464.1 1560 1683 +
Chr2	stalkie_big_nohaplotig	CDS	20069301	20069558	.	-	1	Parent=FBgn0033464.1.mrna1;Target=FBgn0033464.1 1302 1559 +
Chr2	stalkie_big_nohaplotig	CDS	20069619	20070404	.	-	1	Parent=FBgn0033464.1.mrna1;Target=FBgn0033464.1 516 1301 +
Chr2	stalkie_big_nohaplotig	CDS	20071026	20071189	.	-	0	Parent=FBgn0033464.1.mrna1;Target=FBgn0033464.1 352 515 +
Chr2	stalkie_big_nohaplotig	CDS	20072321	20072414	.	-	1	Parent=FBgn0033464.1.mrna1;Target=FBgn0033464.1 258 351 +
Chr2	stalkie_big_nohaplotig	CDS	20072582	20072784	.	-	0	Parent=FBgn0033464.1.mrna1;Target=FBgn0033464.1 55 257 +
Chr2	gffcl	locus	20121020	20122152	.	+	.	ID=RLOC_00015371;geneIDs=FBgn0000715.1.path1;transcripts=FBgn0000715.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20121020	20122152	.	+	.	ID=FBgn0000715.1.mrna1;geneID=FBgn0000715.1.path1;Name=FBgn0000715.1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=1133;mismatches=0;indels=0;unknowns=0;Target=FBgn0000715.1 1134 2 .;CDS_Target=FBgn0000715.1 1134 4 .;locus=RLOC_00015371
Chr2	stalkie_big_nohaplotig	exon	20121020	20122152	100	+	.	Parent=FBgn0000715.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	20121022	20122152	.	+	0	Parent=FBgn0000715.1.mrna1
Chr2	gffcl	locus	20124646	20125435	.	+	.	ID=RLOC_00015372;geneIDs=comp150672_c0_seq1.path1;transcripts=comp150672_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20124646	20125435	.	+	.	ID=comp150672_c0_seq1.mrna1;geneID=comp150672_c0_seq1.path1;Name=comp150672_c0_seq1;Dir=sensecoverage=99.8;identity=99.4;matches=659;mismatches=4;indels=0;unknowns=0;locus=RLOC_00015372
Chr2	stalkie_big_nohaplotig	exon	20124646	20124842	100	+	.	Parent=comp150672_c0_seq1.mrna1;Target=comp150672_c0_seq1 1 197 +
Chr2	stalkie_big_nohaplotig	exon	20124909	20125068	98	+	.	Parent=comp150672_c0_seq1.mrna1;Target=comp150672_c0_seq1 198 357 +
Chr2	stalkie_big_nohaplotig	exon	20125130	20125435	99	+	.	Parent=comp150672_c0_seq1.mrna1;Target=comp150672_c0_seq1 358 663 +
Chr2	stalkie_big_nohaplotig	CDS	20124647	20124842	.	+	0	Parent=comp150672_c0_seq1.mrna1;Target=comp150672_c0_seq1 2 197 +
Chr2	stalkie_big_nohaplotig	CDS	20124909	20125068	.	+	2	Parent=comp150672_c0_seq1.mrna1;Target=comp150672_c0_seq1 198 357 +
Chr2	stalkie_big_nohaplotig	CDS	20125130	20125406	.	+	1	Parent=comp150672_c0_seq1.mrna1;Target=comp150672_c0_seq1 358 634 +
Chr2	gffcl	locus	20127017	20131078	.	+	.	ID=RLOC_00015373;geneIDs=FBgn0033465.1.path1;transcripts=FBgn0033465.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20127017	20131078	.	+	.	ID=FBgn0033465.1.mrna1;geneID=FBgn0033465.1.path1;Name=FBgn0033465.1;Dir=sensecoverage=100.0;identity=100.0;matches=1815;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015373
Chr2	stalkie_big_nohaplotig	exon	20127017	20127047	100	+	.	Parent=FBgn0033465.1.mrna1;Target=FBgn0033465.1 1 31 +
Chr2	stalkie_big_nohaplotig	exon	20128686	20128799	100	+	.	Parent=FBgn0033465.1.mrna1;Target=FBgn0033465.1 32 145 +
Chr2	stalkie_big_nohaplotig	exon	20128864	20128976	100	+	.	Parent=FBgn0033465.1.mrna1;Target=FBgn0033465.1 146 258 +
Chr2	stalkie_big_nohaplotig	exon	20129049	20129620	100	+	.	Parent=FBgn0033465.1.mrna1;Target=FBgn0033465.1 259 830 +
Chr2	stalkie_big_nohaplotig	exon	20129949	20130310	100	+	.	Parent=FBgn0033465.1.mrna1;Target=FBgn0033465.1 831 1192 +
Chr2	stalkie_big_nohaplotig	exon	20130392	20130479	100	+	.	Parent=FBgn0033465.1.mrna1;Target=FBgn0033465.1 1193 1280 +
Chr2	stalkie_big_nohaplotig	exon	20130544	20131078	100	+	.	Parent=FBgn0033465.1.mrna1;Target=FBgn0033465.1 1281 1815 +
Chr2	stalkie_big_nohaplotig	CDS	20127017	20127047	.	+	0	Parent=FBgn0033465.1.mrna1;Target=FBgn0033465.1 1 31 +
Chr2	stalkie_big_nohaplotig	CDS	20128686	20128799	.	+	2	Parent=FBgn0033465.1.mrna1;Target=FBgn0033465.1 32 145 +
Chr2	stalkie_big_nohaplotig	CDS	20128864	20128976	.	+	2	Parent=FBgn0033465.1.mrna1;Target=FBgn0033465.1 146 258 +
Chr2	stalkie_big_nohaplotig	CDS	20129049	20129620	.	+	0	Parent=FBgn0033465.1.mrna1;Target=FBgn0033465.1 259 830 +
Chr2	stalkie_big_nohaplotig	CDS	20129949	20130310	.	+	1	Parent=FBgn0033465.1.mrna1;Target=FBgn0033465.1 831 1192 +
Chr2	stalkie_big_nohaplotig	CDS	20130392	20130479	.	+	2	Parent=FBgn0033465.1.mrna1;Target=FBgn0033465.1 1193 1280 +
Chr2	stalkie_big_nohaplotig	CDS	20130544	20131078	.	+	1	Parent=FBgn0033465.1.mrna1;Target=FBgn0033465.1 1281 1815 +
Chr2	gffcl	locus	20132935	20133606	.	-	.	ID=RLOC_00015374;geneIDs=comp135056_c0_seq1.path1;transcripts=comp135056_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20132935	20133606	.	-	.	ID=comp135056_c0_seq1.mrna1;geneID=comp135056_c0_seq1.path1;Name=comp135056_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=666;mismatches=6;indels=2;unknowns=0;Target=comp135056_c0_seq1 674 1 .;CDS_Target=comp135056_c0_seq1 415 353 .;locus=RLOC_00015374
Chr2	stalkie_big_nohaplotig	exon	20132935	20133606	98	-	.	Parent=comp135056_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	20133194	20133256	.	-	0	Parent=comp135056_c0_seq1.mrna1
Chr2	gffcl	locus	20134207	20134692	.	+	.	ID=RLOC_00015375;geneIDs=comp155684_c0_seq1.path1;transcripts=comp155684_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20134207	20134692	.	+	.	ID=comp155684_c0_seq1.mrna1;geneID=comp155684_c0_seq1.path1;Name=comp155684_c0_seq1;Dir=indeterminatecoverage=92.8;identity=98.3;matches=476;mismatches=8;indels=0;unknowns=0;Target=comp155684_c0_seq1 235 95 .;locus=RLOC_00015375
Chr2	stalkie_big_nohaplotig	exon	20134207	20134647	98	+	.	Parent=comp155684_c0_seq1.mrna1;Target=comp155684_c0_seq1 441 1 .
Chr2	stalkie_big_nohaplotig	exon	20134650	20134692	95	+	.	Parent=comp155684_c0_seq1.mrna1;Target=comp155684_c0_seq1 528 486 .
Chr2	stalkie_big_nohaplotig	CDS	20134301	20134441	.	+	0	Parent=comp155684_c0_seq1.mrna1
Chr2	gffcl	locus	20141246	20193188	.	-	.	ID=RLOC_00015376;geneIDs=FBgn0011656.1.path1,comp115768_c0_seq1.path1,comp162764_c0_seq1.path1;transcripts=comp162764_c0_seq1.mrna1,FBgn0011656.1.mrna1,comp115768_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20141246	20193188	.	-	.	ID=comp162764_c0_seq1.mrna1;geneID=comp162764_c0_seq1.path1;Name=comp162764_c0_seq1;Dir=sensecoverage=92.5;identity=99.9;matches=3565;mismatches=3;indels=1;unknowns=0;locus=RLOC_00015376
Chr2	stalkie_big_nohaplotig	exon	20141246	20142728	99	-	.	Parent=comp162764_c0_seq1.mrna1;Target=comp162764_c0_seq1 2376 3858 +
Chr2	stalkie_big_nohaplotig	exon	20145476	20145547	100	-	.	Parent=comp162764_c0_seq1.mrna1;Target=comp162764_c0_seq1 2304 2375 +
Chr2	stalkie_big_nohaplotig	exon	20146292	20146695	100	-	.	Parent=comp162764_c0_seq1.mrna1;Target=comp162764_c0_seq1 1900 2303 +
Chr2	stalkie_big_nohaplotig	exon	20147587	20147750	100	-	.	Parent=comp162764_c0_seq1.mrna1;Target=comp162764_c0_seq1 1736 1899 +
Chr2	stalkie_big_nohaplotig	exon	20148632	20148762	100	-	.	Parent=comp162764_c0_seq1.mrna1;Target=comp162764_c0_seq1 1605 1735 +
Chr2	stalkie_big_nohaplotig	exon	20149228	20149326	100	-	.	Parent=comp162764_c0_seq1.mrna1;Target=comp162764_c0_seq1 1506 1604 +
Chr2	stalkie_big_nohaplotig	exon	20149871	20150156	100	-	.	Parent=comp162764_c0_seq1.mrna1;Target=comp162764_c0_seq1 1220 1505 +
Chr2	stalkie_big_nohaplotig	exon	20151782	20151985	100	-	.	Parent=comp162764_c0_seq1.mrna1;Target=comp162764_c0_seq1 1016 1219 +
Chr2	stalkie_big_nohaplotig	exon	20154652	20155237	99	-	.	Parent=comp162764_c0_seq1.mrna1;Target=comp162764_c0_seq1 431 1015 +
Chr2	stalkie_big_nohaplotig	exon	20171222	20171303	100	-	.	Parent=comp162764_c0_seq1.mrna1;Target=comp162764_c0_seq1 349 430 +
Chr2	stalkie_big_nohaplotig	exon	20193131	20193188	100	-	.	Parent=comp162764_c0_seq1.mrna1;Target=comp162764_c0_seq1 291 348 +
Chr2	stalkie_big_nohaplotig	CDS	20142553	20142728	.	-	2	Parent=comp162764_c0_seq1.mrna1;Target=comp162764_c0_seq1 2376 2551 +
Chr2	stalkie_big_nohaplotig	CDS	20145476	20145547	.	-	2	Parent=comp162764_c0_seq1.mrna1;Target=comp162764_c0_seq1 2304 2375 +
Chr2	stalkie_big_nohaplotig	CDS	20146292	20146695	.	-	1	Parent=comp162764_c0_seq1.mrna1;Target=comp162764_c0_seq1 1900 2303 +
Chr2	stalkie_big_nohaplotig	CDS	20147587	20147750	.	-	0	Parent=comp162764_c0_seq1.mrna1;Target=comp162764_c0_seq1 1736 1899 +
Chr2	stalkie_big_nohaplotig	CDS	20148632	20148762	.	-	2	Parent=comp162764_c0_seq1.mrna1;Target=comp162764_c0_seq1 1605 1735 +
Chr2	stalkie_big_nohaplotig	CDS	20149228	20149326	.	-	2	Parent=comp162764_c0_seq1.mrna1;Target=comp162764_c0_seq1 1506 1604 +
Chr2	stalkie_big_nohaplotig	CDS	20149871	20150156	.	-	0	Parent=comp162764_c0_seq1.mrna1;Target=comp162764_c0_seq1 1220 1505 +
Chr2	stalkie_big_nohaplotig	CDS	20151782	20151985	.	-	0	Parent=comp162764_c0_seq1.mrna1;Target=comp162764_c0_seq1 1016 1219 +
Chr2	stalkie_big_nohaplotig	CDS	20154652	20154705	.	-	0	Parent=comp162764_c0_seq1.mrna1;Target=comp162764_c0_seq1 962 1015 +
Chr2	stalkie_big_nohaplotig	mRNA	20142556	20154726	.	-	.	ID=FBgn0011656.1.mrna1;geneID=FBgn0011656.1.path1;Name=FBgn0011656.1;Dir=sensecoverage=100.0;identity=100.0;matches=1605;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015376
Chr2	stalkie_big_nohaplotig	exon	20142556	20142707	100	-	.	Parent=FBgn0011656.1.mrna1;Target=FBgn0011656.1 1454 1605 +
Chr2	stalkie_big_nohaplotig	exon	20145476	20145547	100	-	.	Parent=FBgn0011656.1.mrna1;Target=FBgn0011656.1 1382 1453 +
Chr2	stalkie_big_nohaplotig	exon	20146292	20146695	100	-	.	Parent=FBgn0011656.1.mrna1;Target=FBgn0011656.1 978 1381 +
Chr2	stalkie_big_nohaplotig	exon	20147587	20147750	100	-	.	Parent=FBgn0011656.1.mrna1;Target=FBgn0011656.1 814 977 +
Chr2	stalkie_big_nohaplotig	exon	20148632	20148762	100	-	.	Parent=FBgn0011656.1.mrna1;Target=FBgn0011656.1 683 813 +
Chr2	stalkie_big_nohaplotig	exon	20149228	20149326	100	-	.	Parent=FBgn0011656.1.mrna1;Target=FBgn0011656.1 584 682 +
Chr2	stalkie_big_nohaplotig	exon	20149853	20150156	100	-	.	Parent=FBgn0011656.1.mrna1;Target=FBgn0011656.1 280 583 +
Chr2	stalkie_big_nohaplotig	exon	20151782	20151985	100	-	.	Parent=FBgn0011656.1.mrna1;Target=FBgn0011656.1 76 279 +
Chr2	stalkie_big_nohaplotig	exon	20154652	20154726	100	-	.	Parent=FBgn0011656.1.mrna1;Target=FBgn0011656.1 1 75 +
Chr2	stalkie_big_nohaplotig	CDS	20142556	20142707	.	-	2	Parent=FBgn0011656.1.mrna1;Target=FBgn0011656.1 1454 1605 +
Chr2	stalkie_big_nohaplotig	CDS	20145476	20145547	.	-	2	Parent=FBgn0011656.1.mrna1;Target=FBgn0011656.1 1382 1453 +
Chr2	stalkie_big_nohaplotig	CDS	20146292	20146695	.	-	1	Parent=FBgn0011656.1.mrna1;Target=FBgn0011656.1 978 1381 +
Chr2	stalkie_big_nohaplotig	CDS	20147587	20147750	.	-	0	Parent=FBgn0011656.1.mrna1;Target=FBgn0011656.1 814 977 +
Chr2	stalkie_big_nohaplotig	CDS	20148632	20148762	.	-	2	Parent=FBgn0011656.1.mrna1;Target=FBgn0011656.1 683 813 +
Chr2	stalkie_big_nohaplotig	CDS	20149228	20149326	.	-	2	Parent=FBgn0011656.1.mrna1;Target=FBgn0011656.1 584 682 +
Chr2	stalkie_big_nohaplotig	CDS	20149853	20150156	.	-	0	Parent=FBgn0011656.1.mrna1;Target=FBgn0011656.1 280 583 +
Chr2	stalkie_big_nohaplotig	CDS	20151782	20151985	.	-	0	Parent=FBgn0011656.1.mrna1;Target=FBgn0011656.1 76 279 +
Chr2	stalkie_big_nohaplotig	CDS	20154652	20154726	.	-	0	Parent=FBgn0011656.1.mrna1;Target=FBgn0011656.1 1 75 +
Chr2	stalkie_big_nohaplotig	mRNA	20171280	20180034	.	-	.	ID=comp115768_c0_seq1.mrna1;geneID=comp115768_c0_seq1.path1;Name=comp115768_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=354;mismatches=0;indels=0;unknowns=0;Target=comp115768_c0_seq1 146 214 .;locus=RLOC_00015376
Chr2	stalkie_big_nohaplotig	exon	20171280	20171303	100	-	.	Parent=comp115768_c0_seq1.mrna1;Target=comp115768_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	exon	20179705	20180034	100	-	.	Parent=comp115768_c0_seq1.mrna1;Target=comp115768_c0_seq1 25 354 -
Chr2	stalkie_big_nohaplotig	CDS	20179826	20179894	.	-	0	Parent=comp115768_c0_seq1.mrna1
Chr2	gffcl	locus	20144641	20145177	.	-	.	ID=RLOC_00015377;geneIDs=comp140249_c0_seq1.path1;transcripts=comp140249_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20144641	20145177	.	-	.	ID=comp140249_c0_seq1.mrna1;geneID=comp140249_c0_seq1.path1;Name=comp140249_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=537;mismatches=0;indels=0;unknowns=0;Target=comp140249_c0_seq1 537 1 .;CDS_Target=comp140249_c0_seq1 87 1 .;locus=RLOC_00015377
Chr2	stalkie_big_nohaplotig	exon	20144641	20145177	100	-	.	Parent=comp140249_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	20145091	20145177	.	-	0	Parent=comp140249_c0_seq1.mrna1
Chr2	gffcl	locus	20257290	20268235	.	+	.	ID=RLOC_00015378;geneIDs=FBgn0033466.1.path1,comp156622_c0_seq1.path1;transcripts=comp156622_c0_seq1.mrna1,FBgn0033466.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20257290	20267849	.	+	.	ID=comp156622_c0_seq1.mrna1;geneID=comp156622_c0_seq1.path1;Name=comp156622_c0_seq1;Dir=antisensecoverage=82.4;identity=99.6;matches=2461;mismatches=7;indels=2;unknowns=0;locus=RLOC_00015378
Chr2	stalkie_big_nohaplotig	exon	20257290	20257341	98	+	.	Parent=comp156622_c0_seq1.mrna1;Target=comp156622_c0_seq1 2417 2468 -
Chr2	stalkie_big_nohaplotig	exon	20265188	20265362	100	+	.	Parent=comp156622_c0_seq1.mrna1;Target=comp156622_c0_seq1 2242 2416 -
Chr2	stalkie_big_nohaplotig	exon	20265417	20265657	99	+	.	Parent=comp156622_c0_seq1.mrna1;Target=comp156622_c0_seq1 2001 2241 -
Chr2	stalkie_big_nohaplotig	exon	20265724	20266019	99	+	.	Parent=comp156622_c0_seq1.mrna1;Target=comp156622_c0_seq1 1705 2000 -
Chr2	stalkie_big_nohaplotig	exon	20266079	20266285	100	+	.	Parent=comp156622_c0_seq1.mrna1;Target=comp156622_c0_seq1 1498 1704 -
Chr2	stalkie_big_nohaplotig	exon	20266351	20267849	99	+	.	Parent=comp156622_c0_seq1.mrna1;Target=comp156622_c0_seq1 1 1497 -
Chr2	stalkie_big_nohaplotig	CDS	20265266	20265362	.	+	0	Parent=comp156622_c0_seq1.mrna1;Target=comp156622_c0_seq1 2242 2338 .
Chr2	stalkie_big_nohaplotig	CDS	20265417	20265657	.	+	2	Parent=comp156622_c0_seq1.mrna1;Target=comp156622_c0_seq1 2001 2241 .
Chr2	stalkie_big_nohaplotig	CDS	20265724	20266019	.	+	1	Parent=comp156622_c0_seq1.mrna1;Target=comp156622_c0_seq1 1705 2000 .
Chr2	stalkie_big_nohaplotig	CDS	20266079	20266285	.	+	2	Parent=comp156622_c0_seq1.mrna1;Target=comp156622_c0_seq1 1498 1704 .
Chr2	stalkie_big_nohaplotig	CDS	20266351	20266925	.	+	2	Parent=comp156622_c0_seq1.mrna1;Target=comp156622_c0_seq1 923 1497 .
Chr2	stalkie_big_nohaplotig	mRNA	20263833	20268235	.	+	.	ID=FBgn0033466.1.mrna1;geneID=FBgn0033466.1.path1;Name=FBgn0033466.1;Dir=sensecoverage=100.0;identity=99.8;matches=1668;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015378
Chr2	stalkie_big_nohaplotig	exon	20263833	20263910	100	+	.	Parent=FBgn0033466.1.mrna1;Target=FBgn0033466.1 1 78 +
Chr2	stalkie_big_nohaplotig	exon	20265188	20265362	100	+	.	Parent=FBgn0033466.1.mrna1;Target=FBgn0033466.1 79 253 +
Chr2	stalkie_big_nohaplotig	exon	20265417	20265657	99	+	.	Parent=FBgn0033466.1.mrna1;Target=FBgn0033466.1 254 494 +
Chr2	stalkie_big_nohaplotig	exon	20265724	20266019	99	+	.	Parent=FBgn0033466.1.mrna1;Target=FBgn0033466.1 495 790 +
Chr2	stalkie_big_nohaplotig	exon	20266079	20266285	100	+	.	Parent=FBgn0033466.1.mrna1;Target=FBgn0033466.1 791 997 +
Chr2	stalkie_big_nohaplotig	exon	20266351	20266833	100	+	.	Parent=FBgn0033466.1.mrna1;Target=FBgn0033466.1 998 1480 +
Chr2	stalkie_big_nohaplotig	exon	20268045	20268235	99	+	.	Parent=FBgn0033466.1.mrna1;Target=FBgn0033466.1 1481 1671 +
Chr2	stalkie_big_nohaplotig	CDS	20263833	20263910	.	+	0	Parent=FBgn0033466.1.mrna1;Target=FBgn0033466.1 1 78 +
Chr2	stalkie_big_nohaplotig	CDS	20265188	20265362	.	+	0	Parent=FBgn0033466.1.mrna1;Target=FBgn0033466.1 79 253 +
Chr2	stalkie_big_nohaplotig	CDS	20265417	20265657	.	+	2	Parent=FBgn0033466.1.mrna1;Target=FBgn0033466.1 254 494 +
Chr2	stalkie_big_nohaplotig	CDS	20265724	20266019	.	+	1	Parent=FBgn0033466.1.mrna1;Target=FBgn0033466.1 495 790 +
Chr2	stalkie_big_nohaplotig	CDS	20266079	20266285	.	+	2	Parent=FBgn0033466.1.mrna1;Target=FBgn0033466.1 791 997 +
Chr2	stalkie_big_nohaplotig	CDS	20266351	20266833	.	+	2	Parent=FBgn0033466.1.mrna1;Target=FBgn0033466.1 998 1480 +
Chr2	stalkie_big_nohaplotig	CDS	20268045	20268235	.	+	2	Parent=FBgn0033466.1.mrna1;Target=FBgn0033466.1 1481 1671 +
Chr2	gffcl	locus	20257721	20258180	.	+	.	ID=RLOC_00015379;geneIDs=comp52602_c0_seq1.path1;transcripts=comp52602_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20257721	20258180	.	+	.	ID=comp52602_c0_seq1.mrna1;geneID=comp52602_c0_seq1.path1;Name=comp52602_c0_seq1;Dir=indeterminatecoverage=98.1;identity=100.0;matches=460;mismatches=0;indels=0;unknowns=0;Target=comp52602_c0_seq1 460 1 .;CDS_Target=comp52602_c0_seq1 178 2 .;locus=RLOC_00015379
Chr2	stalkie_big_nohaplotig	exon	20257721	20258180	100	+	.	Parent=comp52602_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	20257722	20257898	.	+	0	Parent=comp52602_c0_seq1.mrna1
Chr2	gffcl	locus	20260370	20260927	.	-	.	ID=RLOC_00015380;geneIDs=FBgn0033467.1.path1;transcripts=FBgn0033467.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20260370	20260927	.	-	.	ID=FBgn0033467.1.mrna1;geneID=FBgn0033467.1.path1;Name=FBgn0033467.1;Dir=sensecoverage=99.5;identity=100.0;matches=406;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015380
Chr2	stalkie_big_nohaplotig	exon	20260370	20260530	100	-	.	Parent=FBgn0033467.1.mrna1;Target=FBgn0033467.1 248 408 +
Chr2	stalkie_big_nohaplotig	exon	20260683	20260927	100	-	.	Parent=FBgn0033467.1.mrna1;Target=FBgn0033467.1 3 247 +
Chr2	stalkie_big_nohaplotig	CDS	20260370	20260530	.	-	2	Parent=FBgn0033467.1.mrna1;Target=FBgn0033467.1 248 408 +
Chr2	stalkie_big_nohaplotig	CDS	20260683	20260926	.	-	0	Parent=FBgn0033467.1.mrna1;Target=FBgn0033467.1 4 247 +
Chr2	gffcl	locus	20260985	20262037	.	-	.	ID=RLOC_00015381;geneIDs=FBgn0034008.1.path1;transcripts=FBgn0034008.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20260985	20262037	.	-	.	ID=FBgn0034008.1.mrna1;geneID=FBgn0034008.1.path1;Name=FBgn0034008.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1053;mismatches=0;indels=0;unknowns=0;Target=FBgn0034008.1 1053 1 .;locus=RLOC_00015381
Chr2	stalkie_big_nohaplotig	exon	20260985	20262037	100	-	.	Parent=FBgn0034008.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	20260985	20262037	.	-	0	Parent=FBgn0034008.1.mrna1
Chr2	gffcl	locus	20270357	20279057	.	-	.	ID=RLOC_00015382;geneIDs=FBgn0027572.1.path1;transcripts=FBgn0027572.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20270357	20279057	.	-	.	ID=FBgn0027572.1.mrna1;geneID=FBgn0027572.1.path1;Name=FBgn0027572.1;Dir=sensecoverage=100.0;identity=99.4;matches=1736;mismatches=11;indels=0;unknowns=5;locus=RLOC_00015382
Chr2	stalkie_big_nohaplotig	exon	20270357	20270491	98	-	.	Parent=FBgn0027572.1.mrna1;Target=FBgn0027572.1 1618 1752 +
Chr2	stalkie_big_nohaplotig	exon	20270552	20270657	98	-	.	Parent=FBgn0027572.1.mrna1;Target=FBgn0027572.1 1512 1617 +
Chr2	stalkie_big_nohaplotig	exon	20270716	20271222	98	-	.	Parent=FBgn0027572.1.mrna1;Target=FBgn0027572.1 1005 1511 +
Chr2	stalkie_big_nohaplotig	exon	20272924	20273093	100	-	.	Parent=FBgn0027572.1.mrna1;Target=FBgn0027572.1 835 1004 +
Chr2	stalkie_big_nohaplotig	exon	20273161	20273396	100	-	.	Parent=FBgn0027572.1.mrna1;Target=FBgn0027572.1 599 834 +
Chr2	stalkie_big_nohaplotig	exon	20273468	20273662	100	-	.	Parent=FBgn0027572.1.mrna1;Target=FBgn0027572.1 404 598 +
Chr2	stalkie_big_nohaplotig	exon	20273724	20273821	100	-	.	Parent=FBgn0027572.1.mrna1;Target=FBgn0027572.1 306 403 +
Chr2	stalkie_big_nohaplotig	exon	20273881	20274040	100	-	.	Parent=FBgn0027572.1.mrna1;Target=FBgn0027572.1 146 305 +
Chr2	stalkie_big_nohaplotig	exon	20278913	20279057	100	-	.	Parent=FBgn0027572.1.mrna1;Target=FBgn0027572.1 1 145 +
Chr2	stalkie_big_nohaplotig	CDS	20270357	20270491	.	-	0	Parent=FBgn0027572.1.mrna1;Target=FBgn0027572.1 1618 1752 +
Chr2	stalkie_big_nohaplotig	CDS	20270552	20270657	.	-	1	Parent=FBgn0027572.1.mrna1;Target=FBgn0027572.1 1512 1617 +
Chr2	stalkie_big_nohaplotig	CDS	20270716	20271222	.	-	1	Parent=FBgn0027572.1.mrna1;Target=FBgn0027572.1 1005 1511 +
Chr2	stalkie_big_nohaplotig	CDS	20272924	20273093	.	-	0	Parent=FBgn0027572.1.mrna1;Target=FBgn0027572.1 835 1004 +
Chr2	stalkie_big_nohaplotig	CDS	20273161	20273396	.	-	2	Parent=FBgn0027572.1.mrna1;Target=FBgn0027572.1 599 834 +
Chr2	stalkie_big_nohaplotig	CDS	20273468	20273662	.	-	2	Parent=FBgn0027572.1.mrna1;Target=FBgn0027572.1 404 598 +
Chr2	stalkie_big_nohaplotig	CDS	20273724	20273821	.	-	1	Parent=FBgn0027572.1.mrna1;Target=FBgn0027572.1 306 403 +
Chr2	stalkie_big_nohaplotig	CDS	20273881	20274040	.	-	2	Parent=FBgn0027572.1.mrna1;Target=FBgn0027572.1 146 305 +
Chr2	stalkie_big_nohaplotig	CDS	20278913	20279057	.	-	0	Parent=FBgn0027572.1.mrna1;Target=FBgn0027572.1 1 145 +
Chr2	gffcl	locus	20282376	20284760	.	-	.	ID=RLOC_00015383;geneIDs=FBgn0033259.1.path1;transcripts=FBgn0033259.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20282376	20284760	.	-	.	ID=FBgn0033259.1.mrna1;geneID=FBgn0033259.1.path1;Name=FBgn0033259.1;Dir=sensecoverage=100.0;identity=100.0;matches=2318;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015383
Chr2	stalkie_big_nohaplotig	exon	20282376	20283755	99	-	.	Parent=FBgn0033259.1.mrna1;Target=FBgn0033259.1 940 2319 +
Chr2	stalkie_big_nohaplotig	exon	20283822	20284760	100	-	.	Parent=FBgn0033259.1.mrna1;Target=FBgn0033259.1 1 939 +
Chr2	stalkie_big_nohaplotig	CDS	20282376	20283755	.	-	0	Parent=FBgn0033259.1.mrna1;Target=FBgn0033259.1 940 2319 +
Chr2	stalkie_big_nohaplotig	CDS	20283822	20284760	.	-	0	Parent=FBgn0033259.1.mrna1;Target=FBgn0033259.1 1 939 +
Chr2	gffcl	locus	20285754	20286314	.	+	.	ID=RLOC_00015384;geneIDs=comp71470_c0_seq1.path1;transcripts=comp71470_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20285754	20286314	.	+	.	ID=comp71470_c0_seq1.mrna1;geneID=comp71470_c0_seq1.path1;Name=comp71470_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.2;matches=546;mismatches=15;indels=1;unknowns=0;Target=comp71470_c0_seq1 562 1 .;CDS_Target=comp71470_c0_seq1 475 347 .;locus=RLOC_00015384
Chr2	stalkie_big_nohaplotig	exon	20285754	20286314	97	+	.	Parent=comp71470_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	20286100	20286228	.	+	0	Parent=comp71470_c0_seq1.mrna1
Chr2	gffcl	locus	20287527	20287910	.	+	.	ID=RLOC_00015385;geneIDs=comp147141_c2_seq1.path1;transcripts=comp147141_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20287527	20287910	.	+	.	ID=comp147141_c2_seq1.mrna1;geneID=comp147141_c2_seq1.path1;Name=comp147141_c2_seq1;Dir=indeterminatecoverage=99.2;identity=98.7;matches=379;mismatches=3;indels=2;unknowns=0;Target=comp147141_c2_seq1 385 4 .;CDS_Target=comp147141_c2_seq1 324 292 .;locus=RLOC_00015385
Chr2	stalkie_big_nohaplotig	exon	20287527	20287910	98	+	.	Parent=comp147141_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	20287815	20287849	.	+	0	Parent=comp147141_c2_seq1.mrna1
Chr2	gffcl	locus	20290855	20293427	.	-	.	ID=RLOC_00015386;geneIDs=FBgn0033038.1.path1;transcripts=FBgn0033038.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20290855	20293427	.	-	.	ID=FBgn0033038.1.mrna1;geneID=FBgn0033038.1.path1;Name=FBgn0033038.1;Dir=sensecoverage=100.0;identity=100.0;matches=2115;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015386
Chr2	stalkie_big_nohaplotig	exon	20290855	20291166	100	-	.	Parent=FBgn0033038.1.mrna1;Target=FBgn0033038.1 1804 2115 +
Chr2	stalkie_big_nohaplotig	exon	20291236	20291358	100	-	.	Parent=FBgn0033038.1.mrna1;Target=FBgn0033038.1 1681 1803 +
Chr2	stalkie_big_nohaplotig	exon	20291421	20292122	100	-	.	Parent=FBgn0033038.1.mrna1;Target=FBgn0033038.1 979 1680 +
Chr2	stalkie_big_nohaplotig	exon	20292190	20292496	100	-	.	Parent=FBgn0033038.1.mrna1;Target=FBgn0033038.1 672 978 +
Chr2	stalkie_big_nohaplotig	exon	20292581	20292847	100	-	.	Parent=FBgn0033038.1.mrna1;Target=FBgn0033038.1 405 671 +
Chr2	stalkie_big_nohaplotig	exon	20292904	20293043	100	-	.	Parent=FBgn0033038.1.mrna1;Target=FBgn0033038.1 265 404 +
Chr2	stalkie_big_nohaplotig	exon	20293105	20293227	100	-	.	Parent=FBgn0033038.1.mrna1;Target=FBgn0033038.1 142 264 +
Chr2	stalkie_big_nohaplotig	exon	20293287	20293427	100	-	.	Parent=FBgn0033038.1.mrna1;Target=FBgn0033038.1 1 141 +
Chr2	stalkie_big_nohaplotig	CDS	20290855	20291166	.	-	0	Parent=FBgn0033038.1.mrna1;Target=FBgn0033038.1 1804 2115 +
Chr2	stalkie_big_nohaplotig	CDS	20291236	20291358	.	-	0	Parent=FBgn0033038.1.mrna1;Target=FBgn0033038.1 1681 1803 +
Chr2	stalkie_big_nohaplotig	CDS	20291421	20292122	.	-	0	Parent=FBgn0033038.1.mrna1;Target=FBgn0033038.1 979 1680 +
Chr2	stalkie_big_nohaplotig	CDS	20292190	20292496	.	-	1	Parent=FBgn0033038.1.mrna1;Target=FBgn0033038.1 672 978 +
Chr2	stalkie_big_nohaplotig	CDS	20292581	20292847	.	-	1	Parent=FBgn0033038.1.mrna1;Target=FBgn0033038.1 405 671 +
Chr2	stalkie_big_nohaplotig	CDS	20292904	20293043	.	-	0	Parent=FBgn0033038.1.mrna1;Target=FBgn0033038.1 265 404 +
Chr2	stalkie_big_nohaplotig	CDS	20293105	20293227	.	-	0	Parent=FBgn0033038.1.mrna1;Target=FBgn0033038.1 142 264 +
Chr2	stalkie_big_nohaplotig	CDS	20293287	20293427	.	-	0	Parent=FBgn0033038.1.mrna1;Target=FBgn0033038.1 1 141 +
Chr2	gffcl	locus	20293565	20298672	.	+	.	ID=RLOC_00015387;geneIDs=FBgn0003317.1.path1;transcripts=FBgn0003317.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20293565	20298672	.	+	.	ID=FBgn0003317.1.mrna1;geneID=FBgn0003317.1.path1;Name=FBgn0003317.1;Dir=sensecoverage=100.0;identity=99.9;matches=1721;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015387
Chr2	stalkie_big_nohaplotig	exon	20293565	20293670	99	+	.	Parent=FBgn0003317.1.mrna1;Target=FBgn0003317.1 1 106 +
Chr2	stalkie_big_nohaplotig	exon	20293968	20294085	100	+	.	Parent=FBgn0003317.1.mrna1;Target=FBgn0003317.1 107 224 +
Chr2	stalkie_big_nohaplotig	exon	20294586	20294661	100	+	.	Parent=FBgn0003317.1.mrna1;Target=FBgn0003317.1 225 300 +
Chr2	stalkie_big_nohaplotig	exon	20294728	20294926	100	+	.	Parent=FBgn0003317.1.mrna1;Target=FBgn0003317.1 301 499 +
Chr2	stalkie_big_nohaplotig	exon	20294985	20295208	100	+	.	Parent=FBgn0003317.1.mrna1;Target=FBgn0003317.1 500 723 +
Chr2	stalkie_big_nohaplotig	exon	20295265	20295479	100	+	.	Parent=FBgn0003317.1.mrna1;Target=FBgn0003317.1 724 938 +
Chr2	stalkie_big_nohaplotig	exon	20295550	20295772	100	+	.	Parent=FBgn0003317.1.mrna1;Target=FBgn0003317.1 939 1161 +
Chr2	stalkie_big_nohaplotig	exon	20295845	20296032	100	+	.	Parent=FBgn0003317.1.mrna1;Target=FBgn0003317.1 1162 1349 +
Chr2	stalkie_big_nohaplotig	exon	20296101	20296326	100	+	.	Parent=FBgn0003317.1.mrna1;Target=FBgn0003317.1 1350 1575 +
Chr2	stalkie_big_nohaplotig	exon	20298526	20298672	100	+	.	Parent=FBgn0003317.1.mrna1;Target=FBgn0003317.1 1576 1722 +
Chr2	stalkie_big_nohaplotig	CDS	20293565	20293670	.	+	0	Parent=FBgn0003317.1.mrna1;Target=FBgn0003317.1 1 106 +
Chr2	stalkie_big_nohaplotig	CDS	20293968	20294085	.	+	2	Parent=FBgn0003317.1.mrna1;Target=FBgn0003317.1 107 224 +
Chr2	stalkie_big_nohaplotig	CDS	20294586	20294661	.	+	1	Parent=FBgn0003317.1.mrna1;Target=FBgn0003317.1 225 300 +
Chr2	stalkie_big_nohaplotig	CDS	20294728	20294926	.	+	0	Parent=FBgn0003317.1.mrna1;Target=FBgn0003317.1 301 499 +
Chr2	stalkie_big_nohaplotig	CDS	20294985	20295208	.	+	2	Parent=FBgn0003317.1.mrna1;Target=FBgn0003317.1 500 723 +
Chr2	stalkie_big_nohaplotig	CDS	20295265	20295479	.	+	0	Parent=FBgn0003317.1.mrna1;Target=FBgn0003317.1 724 938 +
Chr2	stalkie_big_nohaplotig	CDS	20295550	20295772	.	+	1	Parent=FBgn0003317.1.mrna1;Target=FBgn0003317.1 939 1161 +
Chr2	stalkie_big_nohaplotig	CDS	20295845	20296032	.	+	0	Parent=FBgn0003317.1.mrna1;Target=FBgn0003317.1 1162 1349 +
Chr2	stalkie_big_nohaplotig	CDS	20296101	20296326	.	+	1	Parent=FBgn0003317.1.mrna1;Target=FBgn0003317.1 1350 1575 +
Chr2	stalkie_big_nohaplotig	CDS	20298526	20298672	.	+	0	Parent=FBgn0003317.1.mrna1;Target=FBgn0003317.1 1576 1722 +
Chr2	gffcl	locus	20301788	20303718	.	-	.	ID=RLOC_00015388;geneIDs=FBgn0033225.1.path1;transcripts=FBgn0033225.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20301788	20303718	.	-	.	ID=FBgn0033225.1.mrna1;geneID=FBgn0033225.1.path1;Name=FBgn0033225.1;Dir=sensecoverage=100.0;identity=100.0;matches=1866;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015388
Chr2	stalkie_big_nohaplotig	exon	20301788	20302318	100	-	.	Parent=FBgn0033225.1.mrna1;Target=FBgn0033225.1 1336 1866 +
Chr2	stalkie_big_nohaplotig	exon	20302384	20303718	100	-	.	Parent=FBgn0033225.1.mrna1;Target=FBgn0033225.1 1 1335 +
Chr2	stalkie_big_nohaplotig	CDS	20301788	20302318	.	-	0	Parent=FBgn0033225.1.mrna1;Target=FBgn0033225.1 1336 1866 +
Chr2	stalkie_big_nohaplotig	CDS	20302384	20303718	.	-	0	Parent=FBgn0033225.1.mrna1;Target=FBgn0033225.1 1 1335 +
Chr2	gffcl	locus	20317535	20327801	.	-	.	ID=RLOC_00015389;geneIDs=FBgn0033260.1.path1;transcripts=FBgn0033260.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20317535	20327801	.	-	.	ID=FBgn0033260.1.mrna1;geneID=FBgn0033260.1.path1;Name=FBgn0033260.1;Dir=sensecoverage=100.0;identity=99.8;matches=2778;mismatches=6;indels=0;unknowns=0;locus=RLOC_00015389
Chr2	stalkie_big_nohaplotig	exon	20317535	20317627	100	-	.	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 2692 2784 +
Chr2	stalkie_big_nohaplotig	exon	20317686	20317838	100	-	.	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 2539 2691 +
Chr2	stalkie_big_nohaplotig	exon	20318184	20318354	100	-	.	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 2368 2538 +
Chr2	stalkie_big_nohaplotig	exon	20318422	20318529	100	-	.	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 2260 2367 +
Chr2	stalkie_big_nohaplotig	exon	20318653	20319042	100	-	.	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 1870 2259 +
Chr2	stalkie_big_nohaplotig	exon	20319205	20319341	100	-	.	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 1733 1869 +
Chr2	stalkie_big_nohaplotig	exon	20319699	20319891	99	-	.	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 1540 1732 +
Chr2	stalkie_big_nohaplotig	exon	20320491	20320677	100	-	.	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 1353 1539 +
Chr2	stalkie_big_nohaplotig	exon	20320743	20321078	100	-	.	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 1017 1352 +
Chr2	stalkie_big_nohaplotig	exon	20321437	20321561	100	-	.	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 892 1016 +
Chr2	stalkie_big_nohaplotig	exon	20321656	20321894	100	-	.	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 653 891 +
Chr2	stalkie_big_nohaplotig	exon	20322090	20322423	100	-	.	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 319 652 +
Chr2	stalkie_big_nohaplotig	exon	20324938	20325120	97	-	.	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 136 318 +
Chr2	stalkie_big_nohaplotig	exon	20327667	20327801	100	-	.	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 1 135 +
Chr2	stalkie_big_nohaplotig	CDS	20317535	20317627	.	-	0	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 2692 2784 +
Chr2	stalkie_big_nohaplotig	CDS	20317686	20317838	.	-	0	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 2539 2691 +
Chr2	stalkie_big_nohaplotig	CDS	20318184	20318354	.	-	0	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 2368 2538 +
Chr2	stalkie_big_nohaplotig	CDS	20318422	20318529	.	-	0	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 2260 2367 +
Chr2	stalkie_big_nohaplotig	CDS	20318653	20319042	.	-	0	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 1870 2259 +
Chr2	stalkie_big_nohaplotig	CDS	20319205	20319341	.	-	2	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 1733 1869 +
Chr2	stalkie_big_nohaplotig	CDS	20319699	20319891	.	-	0	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 1540 1732 +
Chr2	stalkie_big_nohaplotig	CDS	20320491	20320677	.	-	1	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 1353 1539 +
Chr2	stalkie_big_nohaplotig	CDS	20320743	20321078	.	-	1	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 1017 1352 +
Chr2	stalkie_big_nohaplotig	CDS	20321437	20321561	.	-	0	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 892 1016 +
Chr2	stalkie_big_nohaplotig	CDS	20321656	20321894	.	-	2	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 653 891 +
Chr2	stalkie_big_nohaplotig	CDS	20322090	20322423	.	-	0	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 319 652 +
Chr2	stalkie_big_nohaplotig	CDS	20324938	20325120	.	-	0	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 136 318 +
Chr2	stalkie_big_nohaplotig	CDS	20327667	20327801	.	-	0	Parent=FBgn0033260.1.mrna1;Target=FBgn0033260.1 1 135 +
Chr2	gffcl	locus	20323552	20324232	.	-	.	ID=RLOC_00015390;geneIDs=comp152735_c0_seq1.path1;transcripts=comp152735_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20323552	20324232	.	-	.	ID=comp152735_c0_seq1.mrna1;geneID=comp152735_c0_seq1.path1;Name=comp152735_c0_seq1;Dir=indeterminatecoverage=97.1;identity=99.7;matches=679;mismatches=2;indels=0;unknowns=0;Target=comp152735_c0_seq1 700 20 .;CDS_Target=comp152735_c0_seq1 591 511 .;locus=RLOC_00015390
Chr2	stalkie_big_nohaplotig	exon	20323552	20324232	99	-	.	Parent=comp152735_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	20323661	20323741	.	-	0	Parent=comp152735_c0_seq1.mrna1
Chr2	gffcl	locus	20329179	20349366	.	-	.	ID=RLOC_00015391;geneIDs=FBgn0050372.1.path1;transcripts=FBgn0050372.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20329179	20349366	.	-	.	ID=FBgn0050372.1.mrna1;geneID=FBgn0050372.1.path1;Name=FBgn0050372.1;Dir=sensecoverage=100.0;identity=100.0;matches=3465;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015391
Chr2	stalkie_big_nohaplotig	exon	20329179	20329373	100	-	.	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 3271 3465 +
Chr2	stalkie_big_nohaplotig	exon	20330357	20330530	100	-	.	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 3097 3270 +
Chr2	stalkie_big_nohaplotig	exon	20331264	20331340	100	-	.	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 3020 3096 +
Chr2	stalkie_big_nohaplotig	exon	20331407	20331877	100	-	.	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 2549 3019 +
Chr2	stalkie_big_nohaplotig	exon	20331941	20332277	100	-	.	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 2212 2548 +
Chr2	stalkie_big_nohaplotig	exon	20332345	20332464	100	-	.	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 2092 2211 +
Chr2	stalkie_big_nohaplotig	exon	20332535	20333015	100	-	.	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 1611 2091 +
Chr2	stalkie_big_nohaplotig	exon	20333088	20333363	100	-	.	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 1335 1610 +
Chr2	stalkie_big_nohaplotig	exon	20333427	20333586	100	-	.	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 1175 1334 +
Chr2	stalkie_big_nohaplotig	exon	20333849	20334285	100	-	.	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 738 1174 +
Chr2	stalkie_big_nohaplotig	exon	20334350	20334435	100	-	.	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 652 737 +
Chr2	stalkie_big_nohaplotig	exon	20334500	20334754	100	-	.	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 397 651 +
Chr2	stalkie_big_nohaplotig	exon	20334812	20334954	100	-	.	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 254 396 +
Chr2	stalkie_big_nohaplotig	exon	20335020	20335092	100	-	.	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 181 253 +
Chr2	stalkie_big_nohaplotig	exon	20349187	20349366	100	-	.	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 1 180 +
Chr2	stalkie_big_nohaplotig	CDS	20329179	20329373	.	-	0	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 3271 3465 +
Chr2	stalkie_big_nohaplotig	CDS	20330357	20330530	.	-	0	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 3097 3270 +
Chr2	stalkie_big_nohaplotig	CDS	20331264	20331340	.	-	2	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 3020 3096 +
Chr2	stalkie_big_nohaplotig	CDS	20331407	20331877	.	-	2	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 2549 3019 +
Chr2	stalkie_big_nohaplotig	CDS	20331941	20332277	.	-	0	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 2212 2548 +
Chr2	stalkie_big_nohaplotig	CDS	20332345	20332464	.	-	0	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 2092 2211 +
Chr2	stalkie_big_nohaplotig	CDS	20332535	20333015	.	-	1	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 1611 2091 +
Chr2	stalkie_big_nohaplotig	CDS	20333088	20333363	.	-	1	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 1335 1610 +
Chr2	stalkie_big_nohaplotig	CDS	20333427	20333586	.	-	2	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 1175 1334 +
Chr2	stalkie_big_nohaplotig	CDS	20333849	20334285	.	-	1	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 738 1174 +
Chr2	stalkie_big_nohaplotig	CDS	20334350	20334435	.	-	0	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 652 737 +
Chr2	stalkie_big_nohaplotig	CDS	20334500	20334754	.	-	0	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 397 651 +
Chr2	stalkie_big_nohaplotig	CDS	20334812	20334954	.	-	2	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 254 396 +
Chr2	stalkie_big_nohaplotig	CDS	20335020	20335092	.	-	0	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 181 253 +
Chr2	stalkie_big_nohaplotig	CDS	20349187	20349366	.	-	0	Parent=FBgn0050372.1.mrna1;Target=FBgn0050372.1 1 180 +
Chr2	gffcl	locus	20350612	20352259	.	+	.	ID=RLOC_00015392;geneIDs=FBgn0033264.1.path1;transcripts=FBgn0033264.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20350612	20352259	.	+	.	ID=FBgn0033264.1.mrna1;geneID=FBgn0033264.1.path1;Name=FBgn0033264.1;Dir=sensecoverage=100.0;identity=100.0;matches=1515;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015392
Chr2	stalkie_big_nohaplotig	exon	20350612	20350828	100	+	.	Parent=FBgn0033264.1.mrna1;Target=FBgn0033264.1 1 217 +
Chr2	stalkie_big_nohaplotig	exon	20350906	20351870	100	+	.	Parent=FBgn0033264.1.mrna1;Target=FBgn0033264.1 218 1182 +
Chr2	stalkie_big_nohaplotig	exon	20351927	20352259	100	+	.	Parent=FBgn0033264.1.mrna1;Target=FBgn0033264.1 1183 1515 +
Chr2	stalkie_big_nohaplotig	CDS	20350612	20350828	.	+	0	Parent=FBgn0033264.1.mrna1;Target=FBgn0033264.1 1 217 +
Chr2	stalkie_big_nohaplotig	CDS	20350906	20351870	.	+	2	Parent=FBgn0033264.1.mrna1;Target=FBgn0033264.1 218 1182 +
Chr2	stalkie_big_nohaplotig	CDS	20351927	20352259	.	+	0	Parent=FBgn0033264.1.mrna1;Target=FBgn0033264.1 1183 1515 +
Chr2	gffcl	locus	20353120	20353446	.	+	.	ID=RLOC_00015393;geneIDs=comp119027_c1_seq1.path1;transcripts=comp119027_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20353120	20353446	.	+	.	ID=comp119027_c1_seq1.mrna1;geneID=comp119027_c1_seq1.path1;Name=comp119027_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=326;mismatches=1;indels=0;unknowns=0;Target=comp119027_c1_seq1 327 1 .;CDS_Target=comp119027_c1_seq1 187 116 .;locus=RLOC_00015393
Chr2	stalkie_big_nohaplotig	exon	20353120	20353446	99	+	.	Parent=comp119027_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	20353235	20353306	.	+	0	Parent=comp119027_c1_seq1.mrna1
Chr2	gffcl	locus	20354604	20355724	.	-	.	ID=RLOC_00015394;geneIDs=FBgn0033266.1.path1;transcripts=FBgn0033266.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20354604	20355724	.	-	.	ID=FBgn0033266.1.mrna1;geneID=FBgn0033266.1.path1;Name=FBgn0033266.1;Dir=sensecoverage=100.0;identity=99.7;matches=1059;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015394
Chr2	stalkie_big_nohaplotig	exon	20354604	20355072	100	-	.	Parent=FBgn0033266.1.mrna1;Target=FBgn0033266.1 594 1062 +
Chr2	stalkie_big_nohaplotig	exon	20355132	20355724	99	-	.	Parent=FBgn0033266.1.mrna1;Target=FBgn0033266.1 1 593 +
Chr2	stalkie_big_nohaplotig	CDS	20354604	20355072	.	-	1	Parent=FBgn0033266.1.mrna1;Target=FBgn0033266.1 594 1062 +
Chr2	stalkie_big_nohaplotig	CDS	20355132	20355724	.	-	0	Parent=FBgn0033266.1.mrna1;Target=FBgn0033266.1 1 593 +
Chr2	gffcl	locus	20364037	20366758	.	-	.	ID=RLOC_00015395;geneIDs=comp153331_c0_seq1.path1;transcripts=comp153331_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20364037	20366758	.	-	.	ID=comp153331_c0_seq1.mrna1;geneID=comp153331_c0_seq1.path1;Name=comp153331_c0_seq1;Dir=sensecoverage=99.8;identity=97.8;matches=1013;mismatches=18;indels=5;unknowns=0;Target=comp153331_c0_seq1 213 713 +;locus=RLOC_00015395
Chr2	stalkie_big_nohaplotig	exon	20364037	20364860	98	-	.	Parent=comp153331_c0_seq1.mrna1;Target=comp153331_c0_seq1 210 1038 +
Chr2	stalkie_big_nohaplotig	exon	20364935	20365012	85	-	.	Parent=comp153331_c0_seq1.mrna1;Target=comp153331_c0_seq1 132 209 +
Chr2	stalkie_big_nohaplotig	exon	20366630	20366758	99	-	.	Parent=comp153331_c0_seq1.mrna1;Target=comp153331_c0_seq1 3 131 +
Chr2	stalkie_big_nohaplotig	CDS	20364357	20364857	.	-	0	Parent=comp153331_c0_seq1.mrna1
Chr2	gffcl	locus	20370866	20377612	.	-	.	ID=RLOC_00015396;geneIDs=FBgn0259977.1.path1;transcripts=FBgn0259977.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20370866	20377612	.	-	.	ID=FBgn0259977.1.mrna1;geneID=FBgn0259977.1.path1;Name=FBgn0259977.1;Dir=sensecoverage=100.0;identity=99.7;matches=1744;mismatches=5;indels=0;unknowns=0;locus=RLOC_00015396
Chr2	stalkie_big_nohaplotig	exon	20370866	20371227	99	-	.	Parent=FBgn0259977.1.mrna1;Target=FBgn0259977.1 1388 1749 +
Chr2	stalkie_big_nohaplotig	exon	20371293	20371432	100	-	.	Parent=FBgn0259977.1.mrna1;Target=FBgn0259977.1 1248 1387 +
Chr2	stalkie_big_nohaplotig	exon	20371495	20372417	99	-	.	Parent=FBgn0259977.1.mrna1;Target=FBgn0259977.1 325 1247 +
Chr2	stalkie_big_nohaplotig	exon	20373910	20374094	100	-	.	Parent=FBgn0259977.1.mrna1;Target=FBgn0259977.1 140 324 +
Chr2	stalkie_big_nohaplotig	exon	20377474	20377612	100	-	.	Parent=FBgn0259977.1.mrna1;Target=FBgn0259977.1 1 139 +
Chr2	stalkie_big_nohaplotig	CDS	20370866	20371227	.	-	2	Parent=FBgn0259977.1.mrna1;Target=FBgn0259977.1 1388 1749 +
Chr2	stalkie_big_nohaplotig	CDS	20371293	20371432	.	-	1	Parent=FBgn0259977.1.mrna1;Target=FBgn0259977.1 1248 1387 +
Chr2	stalkie_big_nohaplotig	CDS	20371495	20372417	.	-	0	Parent=FBgn0259977.1.mrna1;Target=FBgn0259977.1 325 1247 +
Chr2	stalkie_big_nohaplotig	CDS	20373910	20374094	.	-	2	Parent=FBgn0259977.1.mrna1;Target=FBgn0259977.1 140 324 +
Chr2	stalkie_big_nohaplotig	CDS	20377474	20377612	.	-	0	Parent=FBgn0259977.1.mrna1;Target=FBgn0259977.1 1 139 +
Chr2	gffcl	locus	20392818	20393894	.	+	.	ID=RLOC_00015397;geneIDs=ORF2813.path1;transcripts=ORF2813.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20392818	20393894	.	+	.	ID=ORF2813.mrna1;geneID=ORF2813.path1;Name=ORF2813;Dir=sensecoverage=87.9;identity=95.8;matches=703;mismatches=1;indels=30;unknowns=0;locus=RLOC_00015397
Chr2	stalkie_big_nohaplotig	exon	20392818	20392911	100	+	.	Parent=ORF2813.mrna1;Target=ORF2813 56 149 +
Chr2	stalkie_big_nohaplotig	exon	20392967	20393498	99	+	.	Parent=ORF2813.mrna1;Target=ORF2813 150 681 +
Chr2	stalkie_big_nohaplotig	exon	20393787	20393894	72	+	.	Parent=ORF2813.mrna1;Target=ORF2813 682 759 +
Chr2	stalkie_big_nohaplotig	CDS	20392820	20392911	.	+	0	Parent=ORF2813.mrna1;Target=ORF2813 58 149 +
Chr2	stalkie_big_nohaplotig	CDS	20392967	20393498	.	+	1	Parent=ORF2813.mrna1;Target=ORF2813 150 681 +
Chr2	stalkie_big_nohaplotig	CDS	20393787	20393894	.	+	0	Parent=ORF2813.mrna1;Target=ORF2813 682 759 +
Chr2	gffcl	locus	20393907	20394473	.	+	.	ID=RLOC_00015398;geneIDs=comp142587_c0_seq1.path1;transcripts=comp142587_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20393907	20394473	.	+	.	ID=comp142587_c0_seq1.mrna1;geneID=comp142587_c0_seq1.path1;Name=comp142587_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.8;matches=566;mismatches=1;indels=0;unknowns=0;Target=comp142587_c0_seq1 571 5 .;CDS_Target=comp142587_c0_seq1 364 5 .;locus=RLOC_00015398
Chr2	stalkie_big_nohaplotig	exon	20393907	20394473	99	+	.	Parent=comp142587_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	20393907	20394266	.	+	0	Parent=comp142587_c0_seq1.mrna1
Chr2	gffcl	locus	20397812	20406562	.	-	.	ID=RLOC_00015399;geneIDs=FBgn0050446.1.path1;transcripts=FBgn0050446.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20397812	20406562	.	-	.	ID=FBgn0050446.1.mrna1;geneID=FBgn0050446.1.path1;Name=FBgn0050446.1;Dir=sensecoverage=100.0;identity=99.8;matches=1911;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015399
Chr2	stalkie_big_nohaplotig	exon	20397812	20397980	99	-	.	Parent=FBgn0050446.1.mrna1;Target=FBgn0050446.1 1746 1914 +
Chr2	stalkie_big_nohaplotig	exon	20398040	20398554	100	-	.	Parent=FBgn0050446.1.mrna1;Target=FBgn0050446.1 1231 1745 +
Chr2	stalkie_big_nohaplotig	exon	20403472	20403598	100	-	.	Parent=FBgn0050446.1.mrna1;Target=FBgn0050446.1 1104 1230 +
Chr2	stalkie_big_nohaplotig	exon	20403848	20404062	100	-	.	Parent=FBgn0050446.1.mrna1;Target=FBgn0050446.1 889 1103 +
Chr2	stalkie_big_nohaplotig	exon	20404222	20404419	100	-	.	Parent=FBgn0050446.1.mrna1;Target=FBgn0050446.1 691 888 +
Chr2	stalkie_big_nohaplotig	exon	20404478	20404714	99	-	.	Parent=FBgn0050446.1.mrna1;Target=FBgn0050446.1 454 690 +
Chr2	stalkie_big_nohaplotig	exon	20404779	20404849	100	-	.	Parent=FBgn0050446.1.mrna1;Target=FBgn0050446.1 383 453 +
Chr2	stalkie_big_nohaplotig	exon	20404916	20405152	99	-	.	Parent=FBgn0050446.1.mrna1;Target=FBgn0050446.1 146 382 +
Chr2	stalkie_big_nohaplotig	exon	20406418	20406562	100	-	.	Parent=FBgn0050446.1.mrna1;Target=FBgn0050446.1 1 145 +
Chr2	stalkie_big_nohaplotig	CDS	20397812	20397980	.	-	1	Parent=FBgn0050446.1.mrna1;Target=FBgn0050446.1 1746 1914 +
Chr2	stalkie_big_nohaplotig	CDS	20398040	20398554	.	-	0	Parent=FBgn0050446.1.mrna1;Target=FBgn0050446.1 1231 1745 +
Chr2	stalkie_big_nohaplotig	CDS	20403472	20403598	.	-	1	Parent=FBgn0050446.1.mrna1;Target=FBgn0050446.1 1104 1230 +
Chr2	stalkie_big_nohaplotig	CDS	20403848	20404062	.	-	0	Parent=FBgn0050446.1.mrna1;Target=FBgn0050446.1 889 1103 +
Chr2	stalkie_big_nohaplotig	CDS	20404222	20404419	.	-	0	Parent=FBgn0050446.1.mrna1;Target=FBgn0050446.1 691 888 +
Chr2	stalkie_big_nohaplotig	CDS	20404478	20404714	.	-	0	Parent=FBgn0050446.1.mrna1;Target=FBgn0050446.1 454 690 +
Chr2	stalkie_big_nohaplotig	CDS	20404779	20404849	.	-	2	Parent=FBgn0050446.1.mrna1;Target=FBgn0050446.1 383 453 +
Chr2	stalkie_big_nohaplotig	CDS	20404916	20405152	.	-	2	Parent=FBgn0050446.1.mrna1;Target=FBgn0050446.1 146 382 +
Chr2	stalkie_big_nohaplotig	CDS	20406418	20406562	.	-	0	Parent=FBgn0050446.1.mrna1;Target=FBgn0050446.1 1 145 +
Chr2	gffcl	locus	20410482	20411210	.	-	.	ID=RLOC_00015400;geneIDs=comp116771_c0_seq1.path1;transcripts=comp116771_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20410482	20411210	.	-	.	ID=comp116771_c0_seq1.mrna1;geneID=comp116771_c0_seq1.path1;Name=comp116771_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.7;matches=727;mismatches=2;indels=0;unknowns=0;Target=comp116771_c0_seq1 730 2 .;CDS_Target=comp116771_c0_seq1 508 434 .;locus=RLOC_00015400
Chr2	stalkie_big_nohaplotig	exon	20410482	20411210	99	-	.	Parent=comp116771_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	20410704	20410778	.	-	0	Parent=comp116771_c0_seq1.mrna1
Chr2	gffcl	locus	20415519	20416372	.	+	.	ID=RLOC_00015401;geneIDs=FBgn0033092.1.path1;transcripts=FBgn0033092.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20415519	20416372	.	+	.	ID=FBgn0033092.1.mrna1;geneID=FBgn0033092.1.path1;Name=FBgn0033092.1;Dir=sensecoverage=100.0;identity=100.0;matches=684;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015401
Chr2	stalkie_big_nohaplotig	exon	20415519	20415635	100	+	.	Parent=FBgn0033092.1.mrna1;Target=FBgn0033092.1 1 117 +
Chr2	stalkie_big_nohaplotig	exon	20415695	20415876	100	+	.	Parent=FBgn0033092.1.mrna1;Target=FBgn0033092.1 118 299 +
Chr2	stalkie_big_nohaplotig	exon	20415931	20416044	100	+	.	Parent=FBgn0033092.1.mrna1;Target=FBgn0033092.1 300 413 +
Chr2	stalkie_big_nohaplotig	exon	20416102	20416372	100	+	.	Parent=FBgn0033092.1.mrna1;Target=FBgn0033092.1 414 684 +
Chr2	stalkie_big_nohaplotig	CDS	20415519	20415635	.	+	0	Parent=FBgn0033092.1.mrna1;Target=FBgn0033092.1 1 117 +
Chr2	stalkie_big_nohaplotig	CDS	20415695	20415876	.	+	0	Parent=FBgn0033092.1.mrna1;Target=FBgn0033092.1 118 299 +
Chr2	stalkie_big_nohaplotig	CDS	20415931	20416044	.	+	1	Parent=FBgn0033092.1.mrna1;Target=FBgn0033092.1 300 413 +
Chr2	stalkie_big_nohaplotig	CDS	20416102	20416372	.	+	1	Parent=FBgn0033092.1.mrna1;Target=FBgn0033092.1 414 684 +
Chr2	gffcl	locus	20417259	20418304	.	-	.	ID=RLOC_00015402;geneIDs=FBgn0259483.1.path1;transcripts=FBgn0259483.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20417259	20418304	.	-	.	ID=FBgn0259483.1.mrna1;geneID=FBgn0259483.1.path1;Name=FBgn0259483.1;Dir=sensecoverage=100.0;identity=100.0;matches=687;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015402
Chr2	stalkie_big_nohaplotig	exon	20417259	20417493	100	-	.	Parent=FBgn0259483.1.mrna1;Target=FBgn0259483.1 453 687 +
Chr2	stalkie_big_nohaplotig	exon	20417558	20417767	100	-	.	Parent=FBgn0259483.1.mrna1;Target=FBgn0259483.1 243 452 +
Chr2	stalkie_big_nohaplotig	exon	20418007	20418170	100	-	.	Parent=FBgn0259483.1.mrna1;Target=FBgn0259483.1 79 242 +
Chr2	stalkie_big_nohaplotig	exon	20418227	20418304	100	-	.	Parent=FBgn0259483.1.mrna1;Target=FBgn0259483.1 1 78 +
Chr2	stalkie_big_nohaplotig	CDS	20417259	20417493	.	-	1	Parent=FBgn0259483.1.mrna1;Target=FBgn0259483.1 453 687 +
Chr2	stalkie_big_nohaplotig	CDS	20417558	20417767	.	-	1	Parent=FBgn0259483.1.mrna1;Target=FBgn0259483.1 243 452 +
Chr2	stalkie_big_nohaplotig	CDS	20418007	20418170	.	-	0	Parent=FBgn0259483.1.mrna1;Target=FBgn0259483.1 79 242 +
Chr2	stalkie_big_nohaplotig	CDS	20418227	20418304	.	-	0	Parent=FBgn0259483.1.mrna1;Target=FBgn0259483.1 1 78 +
Chr2	gffcl	locus	20421455	20424347	.	+	.	ID=RLOC_00015403;geneIDs=FBgn0014009.1.path1;transcripts=FBgn0014009.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20421455	20424347	.	+	.	ID=FBgn0014009.1.mrna1;geneID=FBgn0014009.1.path1;Name=FBgn0014009.1;Dir=sensecoverage=100.0;identity=100.0;matches=657;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015403
Chr2	stalkie_big_nohaplotig	exon	20421455	20421518	100	+	.	Parent=FBgn0014009.1.mrna1;Target=FBgn0014009.1 1 64 +
Chr2	stalkie_big_nohaplotig	exon	20422209	20422368	100	+	.	Parent=FBgn0014009.1.mrna1;Target=FBgn0014009.1 65 224 +
Chr2	stalkie_big_nohaplotig	exon	20422427	20422582	100	+	.	Parent=FBgn0014009.1.mrna1;Target=FBgn0014009.1 225 380 +
Chr2	stalkie_big_nohaplotig	exon	20424000	20424180	100	+	.	Parent=FBgn0014009.1.mrna1;Target=FBgn0014009.1 381 561 +
Chr2	stalkie_big_nohaplotig	exon	20424252	20424347	100	+	.	Parent=FBgn0014009.1.mrna1;Target=FBgn0014009.1 562 657 +
Chr2	stalkie_big_nohaplotig	CDS	20421455	20421518	.	+	0	Parent=FBgn0014009.1.mrna1;Target=FBgn0014009.1 1 64 +
Chr2	stalkie_big_nohaplotig	CDS	20422209	20422368	.	+	2	Parent=FBgn0014009.1.mrna1;Target=FBgn0014009.1 65 224 +
Chr2	stalkie_big_nohaplotig	CDS	20422427	20422582	.	+	1	Parent=FBgn0014009.1.mrna1;Target=FBgn0014009.1 225 380 +
Chr2	stalkie_big_nohaplotig	CDS	20424000	20424180	.	+	1	Parent=FBgn0014009.1.mrna1;Target=FBgn0014009.1 381 561 +
Chr2	stalkie_big_nohaplotig	CDS	20424252	20424347	.	+	0	Parent=FBgn0014009.1.mrna1;Target=FBgn0014009.1 562 657 +
Chr2	gffcl	locus	20424747	20425244	.	+	.	ID=RLOC_00015404;geneIDs=comp114578_c0_seq1.path1;transcripts=comp114578_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20424747	20425244	.	+	.	ID=comp114578_c0_seq1.mrna1;geneID=comp114578_c0_seq1.path1;Name=comp114578_c0_seq1;Dir=indeterminatecoverage=97.5;identity=99.6;matches=496;mismatches=2;indels=0;unknowns=0;Target=comp114578_c0_seq1 511 14 .;CDS_Target=comp114578_c0_seq1 92 15 .;locus=RLOC_00015404
Chr2	stalkie_big_nohaplotig	exon	20424747	20425244	99	+	.	Parent=comp114578_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	20424748	20424825	.	+	0	Parent=comp114578_c0_seq1.mrna1
Chr2	gffcl	locus	20427165	20427774	.	-	.	ID=RLOC_00015405;geneIDs=comp135389_c0_seq1.path1;transcripts=comp135389_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20427165	20427774	.	-	.	ID=comp135389_c0_seq1.mrna1;geneID=comp135389_c0_seq1.path1;Name=comp135389_c0_seq1;Dir=indeterminatecoverage=97.9;identity=98.7;matches=602;mismatches=3;indels=5;unknowns=0;Target=comp135389_c0_seq1 605 1 .;CDS_Target=comp135389_c0_seq1 451 377 .;locus=RLOC_00015405
Chr2	stalkie_big_nohaplotig	exon	20427165	20427774	98	-	.	Parent=comp135389_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	20427319	20427393	.	-	0	Parent=comp135389_c0_seq1.mrna1
Chr2	gffcl	locus	20429874	20434029	.	-	.	ID=RLOC_00015406;geneIDs=FBgn0033095.1.path1;transcripts=FBgn0033095.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20429874	20434029	.	-	.	ID=FBgn0033095.1.mrna1;geneID=FBgn0033095.1.path1;Name=FBgn0033095.1;Dir=sensecoverage=100.0;identity=100.0;matches=2706;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015406
Chr2	stalkie_big_nohaplotig	exon	20429874	20430015	100	-	.	Parent=FBgn0033095.1.mrna1;Target=FBgn0033095.1 2565 2706 +
Chr2	stalkie_big_nohaplotig	exon	20430084	20430324	100	-	.	Parent=FBgn0033095.1.mrna1;Target=FBgn0033095.1 2324 2564 +
Chr2	stalkie_big_nohaplotig	exon	20430401	20430582	100	-	.	Parent=FBgn0033095.1.mrna1;Target=FBgn0033095.1 2142 2323 +
Chr2	stalkie_big_nohaplotig	exon	20431815	20431924	100	-	.	Parent=FBgn0033095.1.mrna1;Target=FBgn0033095.1 2032 2141 +
Chr2	stalkie_big_nohaplotig	exon	20431999	20434029	100	-	.	Parent=FBgn0033095.1.mrna1;Target=FBgn0033095.1 1 2031 +
Chr2	stalkie_big_nohaplotig	CDS	20429874	20430015	.	-	1	Parent=FBgn0033095.1.mrna1;Target=FBgn0033095.1 2565 2706 +
Chr2	stalkie_big_nohaplotig	CDS	20430084	20430324	.	-	2	Parent=FBgn0033095.1.mrna1;Target=FBgn0033095.1 2324 2564 +
Chr2	stalkie_big_nohaplotig	CDS	20430401	20430582	.	-	1	Parent=FBgn0033095.1.mrna1;Target=FBgn0033095.1 2142 2323 +
Chr2	stalkie_big_nohaplotig	CDS	20431815	20431924	.	-	0	Parent=FBgn0033095.1.mrna1;Target=FBgn0033095.1 2032 2141 +
Chr2	stalkie_big_nohaplotig	CDS	20431999	20434029	.	-	0	Parent=FBgn0033095.1.mrna1;Target=FBgn0033095.1 1 2031 +
Chr2	stalkie_big_nohaplotig	mRNA	20434470	20435227	.	-	.	ID=comp758779_c0_seq1.mrna1;geneID=comp758779_c0_seq1.path1;Name=comp758779_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=280;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015407
Chr2	stalkie_big_nohaplotig	exon	20434470	20434492	100	-	.	Parent=comp758779_c0_seq1.mrna1;Target=comp758779_c0_seq1 1 23 -
Chr2	stalkie_big_nohaplotig	exon	20434970	20435227	99	-	.	Parent=comp758779_c0_seq1.mrna1;Target=comp758779_c0_seq1 24 281 -
Chr2	stalkie_big_nohaplotig	CDS	20434471	20434492	.	-	1	Parent=comp758779_c0_seq1.mrna1;Target=comp758779_c0_seq1 2 23 .
Chr2	stalkie_big_nohaplotig	CDS	20434970	20435001	.	-	0	Parent=comp758779_c0_seq1.mrna1;Target=comp758779_c0_seq1 24 55 .
Chr2	gffcl	locus	20521250	20521585	.	+	.	ID=RLOC_00015408;geneIDs=comp156476_c1_seq1.path1;transcripts=comp156476_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20521250	20521585	.	+	.	ID=comp156476_c1_seq1.mrna1;geneID=comp156476_c1_seq1.path1;Name=comp156476_c1_seq1;Dir=indeterminatecoverage=3.9;identity=99.4;matches=334;mismatches=2;indels=0;unknowns=0;Target=comp156476_c1_seq1 339 4 .;locus=RLOC_00015408
Chr2	stalkie_big_nohaplotig	exon	20521250	20521585	99	+	.	Parent=comp156476_c1_seq1.mrna1
Chr2	gffcl	locus	20524838	20569897	.	+	.	ID=RLOC_00015409;geneIDs=FBgn0010482.1.path1;transcripts=FBgn0010482.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20524838	20569897	.	+	.	ID=FBgn0010482.1.mrna1;geneID=FBgn0010482.1.path1;Name=FBgn0010482.1;Dir=sensecoverage=100.0;identity=100.0;matches=4809;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015409
Chr2	stalkie_big_nohaplotig	exon	20524838	20525072	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 1 235 +
Chr2	stalkie_big_nohaplotig	exon	20534347	20534503	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 236 392 +
Chr2	stalkie_big_nohaplotig	exon	20535718	20535884	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 393 559 +
Chr2	stalkie_big_nohaplotig	exon	20536407	20536442	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 560 595 +
Chr2	stalkie_big_nohaplotig	exon	20546546	20546728	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 596 778 +
Chr2	stalkie_big_nohaplotig	exon	20546797	20546940	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 779 922 +
Chr2	stalkie_big_nohaplotig	exon	20547005	20547138	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 923 1056 +
Chr2	stalkie_big_nohaplotig	exon	20547385	20547565	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 1057 1237 +
Chr2	stalkie_big_nohaplotig	exon	20547622	20547936	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 1238 1552 +
Chr2	stalkie_big_nohaplotig	exon	20548472	20548786	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 1553 1867 +
Chr2	stalkie_big_nohaplotig	exon	20549700	20550344	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 1868 2512 +
Chr2	stalkie_big_nohaplotig	exon	20550410	20550448	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 2513 2551 +
Chr2	stalkie_big_nohaplotig	exon	20551424	20551567	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 2552 2695 +
Chr2	stalkie_big_nohaplotig	exon	20561443	20561574	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 2696 2827 +
Chr2	stalkie_big_nohaplotig	exon	20562028	20562351	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 2828 3151 +
Chr2	stalkie_big_nohaplotig	exon	20562411	20562599	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 3152 3340 +
Chr2	stalkie_big_nohaplotig	exon	20562667	20562804	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 3341 3478 +
Chr2	stalkie_big_nohaplotig	exon	20565681	20565863	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 3479 3661 +
Chr2	stalkie_big_nohaplotig	exon	20566107	20566238	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 3662 3793 +
Chr2	stalkie_big_nohaplotig	exon	20568453	20568609	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 3794 3950 +
Chr2	stalkie_big_nohaplotig	exon	20568669	20568835	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 3951 4117 +
Chr2	stalkie_big_nohaplotig	exon	20569021	20569177	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 4118 4274 +
Chr2	stalkie_big_nohaplotig	exon	20569235	20569401	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 4275 4441 +
Chr2	stalkie_big_nohaplotig	exon	20569461	20569643	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 4442 4624 +
Chr2	stalkie_big_nohaplotig	exon	20569713	20569897	100	+	.	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 4625 4809 +
Chr2	stalkie_big_nohaplotig	CDS	20524838	20525072	.	+	0	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 1 235 +
Chr2	stalkie_big_nohaplotig	CDS	20534347	20534503	.	+	2	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 236 392 +
Chr2	stalkie_big_nohaplotig	CDS	20535718	20535884	.	+	1	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 393 559 +
Chr2	stalkie_big_nohaplotig	CDS	20536407	20536442	.	+	2	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 560 595 +
Chr2	stalkie_big_nohaplotig	CDS	20546546	20546728	.	+	2	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 596 778 +
Chr2	stalkie_big_nohaplotig	CDS	20546797	20546940	.	+	2	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 779 922 +
Chr2	stalkie_big_nohaplotig	CDS	20547005	20547138	.	+	2	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 923 1056 +
Chr2	stalkie_big_nohaplotig	CDS	20547385	20547565	.	+	0	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 1057 1237 +
Chr2	stalkie_big_nohaplotig	CDS	20547622	20547936	.	+	2	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 1238 1552 +
Chr2	stalkie_big_nohaplotig	CDS	20548472	20548786	.	+	2	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 1553 1867 +
Chr2	stalkie_big_nohaplotig	CDS	20549700	20550344	.	+	2	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 1868 2512 +
Chr2	stalkie_big_nohaplotig	CDS	20550410	20550448	.	+	2	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 2513 2551 +
Chr2	stalkie_big_nohaplotig	CDS	20551424	20551567	.	+	2	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 2552 2695 +
Chr2	stalkie_big_nohaplotig	CDS	20561443	20561574	.	+	2	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 2696 2827 +
Chr2	stalkie_big_nohaplotig	CDS	20562028	20562351	.	+	2	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 2828 3151 +
Chr2	stalkie_big_nohaplotig	CDS	20562411	20562599	.	+	2	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 3152 3340 +
Chr2	stalkie_big_nohaplotig	CDS	20562667	20562804	.	+	2	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 3341 3478 +
Chr2	stalkie_big_nohaplotig	CDS	20565681	20565863	.	+	2	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 3479 3661 +
Chr2	stalkie_big_nohaplotig	CDS	20566107	20566238	.	+	2	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 3662 3793 +
Chr2	stalkie_big_nohaplotig	CDS	20568453	20568609	.	+	2	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 3794 3950 +
Chr2	stalkie_big_nohaplotig	CDS	20568669	20568835	.	+	1	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 3951 4117 +
Chr2	stalkie_big_nohaplotig	CDS	20569021	20569177	.	+	2	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 4118 4274 +
Chr2	stalkie_big_nohaplotig	CDS	20569235	20569401	.	+	1	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 4275 4441 +
Chr2	stalkie_big_nohaplotig	CDS	20569461	20569643	.	+	2	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 4442 4624 +
Chr2	stalkie_big_nohaplotig	CDS	20569713	20569897	.	+	2	Parent=FBgn0010482.1.mrna1;Target=FBgn0010482.1 4625 4809 +
Chr2	gffcl	locus	20558325	20558578	.	+	.	ID=RLOC_00015410;geneIDs=comp153564_c2_seq1.path2;transcripts=comp153564_c2_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	20558325	20558578	.	+	.	ID=comp153564_c2_seq1.mrna2;geneID=comp153564_c2_seq1.path2;Name=comp153564_c2_seq1;Dir=indeterminatecoverage=6.2;identity=96.6;matches=252;mismatches=2;indels=7;unknowns=0;Target=comp153564_c2_seq1 4210 3950 .;locus=RLOC_00015410
Chr2	stalkie_big_nohaplotig	exon	20558325	20558578	96	+	.	Parent=comp153564_c2_seq1.mrna2
Chr2	gffcl	locus	20574141	20574990	.	-	.	ID=RLOC_00015411;geneIDs=comp149749_c0_seq1.path1;transcripts=comp149749_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20574141	20574990	.	-	.	ID=comp149749_c0_seq1.mrna1;geneID=comp149749_c0_seq1.path1;Name=comp149749_c0_seq1;Dir=indeterminatecoverage=99.9;identity=89.4;matches=737;mismatches=33;indels=54;unknowns=0;Target=comp149749_c0_seq1 77 3 .;locus=RLOC_00015411
Chr2	stalkie_big_nohaplotig	exon	20574141	20574197	96	-	.	Parent=comp149749_c0_seq1.mrna1;Target=comp149749_c0_seq1 798 742 .
Chr2	stalkie_big_nohaplotig	exon	20574233	20574990	88	-	.	Parent=comp149749_c0_seq1.mrna1;Target=comp149749_c0_seq1 722 1 .
Chr2	stalkie_big_nohaplotig	CDS	20574914	20574988	.	-	0	Parent=comp149749_c0_seq1.mrna1
Chr2	gffcl	locus	20575454	20580178	.	+	.	ID=RLOC_00015412;geneIDs=FBgn0028579.1.path1;transcripts=FBgn0028579.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20575454	20580178	.	+	.	ID=FBgn0028579.1.mrna1;geneID=FBgn0028579.1.path1;Name=FBgn0028579.1;Dir=sensecoverage=100.0;identity=99.9;matches=2950;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015412
Chr2	stalkie_big_nohaplotig	exon	20575454	20575524	100	+	.	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 1 71 +
Chr2	stalkie_big_nohaplotig	exon	20575589	20575728	100	+	.	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 72 211 +
Chr2	stalkie_big_nohaplotig	exon	20575796	20576097	100	+	.	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 212 513 +
Chr2	stalkie_big_nohaplotig	exon	20576163	20576356	100	+	.	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 514 707 +
Chr2	stalkie_big_nohaplotig	exon	20577044	20577875	100	+	.	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 708 1539 +
Chr2	stalkie_big_nohaplotig	exon	20577931	20578195	100	+	.	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 1540 1804 +
Chr2	stalkie_big_nohaplotig	exon	20578275	20578409	100	+	.	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 1805 1939 +
Chr2	stalkie_big_nohaplotig	exon	20578915	20579093	99	+	.	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 1940 2118 +
Chr2	stalkie_big_nohaplotig	exon	20579154	20579374	100	+	.	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 2119 2339 +
Chr2	stalkie_big_nohaplotig	exon	20579434	20579563	100	+	.	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 2340 2469 +
Chr2	stalkie_big_nohaplotig	exon	20579628	20579885	100	+	.	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 2470 2727 +
Chr2	stalkie_big_nohaplotig	exon	20579954	20580178	99	+	.	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 2728 2952 +
Chr2	stalkie_big_nohaplotig	CDS	20575454	20575524	.	+	0	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 1 71 +
Chr2	stalkie_big_nohaplotig	CDS	20575589	20575728	.	+	1	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 72 211 +
Chr2	stalkie_big_nohaplotig	CDS	20575796	20576097	.	+	2	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 212 513 +
Chr2	stalkie_big_nohaplotig	CDS	20576163	20576356	.	+	0	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 514 707 +
Chr2	stalkie_big_nohaplotig	CDS	20577044	20577875	.	+	1	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 708 1539 +
Chr2	stalkie_big_nohaplotig	CDS	20577931	20578195	.	+	0	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 1540 1804 +
Chr2	stalkie_big_nohaplotig	CDS	20578275	20578409	.	+	2	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 1805 1939 +
Chr2	stalkie_big_nohaplotig	CDS	20578915	20579093	.	+	2	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 1940 2118 +
Chr2	stalkie_big_nohaplotig	CDS	20579154	20579374	.	+	0	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 2119 2339 +
Chr2	stalkie_big_nohaplotig	CDS	20579434	20579563	.	+	1	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 2340 2469 +
Chr2	stalkie_big_nohaplotig	CDS	20579628	20579885	.	+	0	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 2470 2727 +
Chr2	stalkie_big_nohaplotig	CDS	20579954	20580178	.	+	0	Parent=FBgn0028579.1.mrna1;Target=FBgn0028579.1 2728 2952 +
Chr2	gffcl	locus	20584698	20618927	.	+	.	ID=RLOC_00015413;geneIDs=FBgn0033476.1.path1;transcripts=FBgn0033476.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20584698	20618927	.	+	.	ID=FBgn0033476.1.mrna1;geneID=FBgn0033476.1.path1;Name=FBgn0033476.1;Dir=sensecoverage=99.7;identity=100.0;matches=2012;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015413
Chr2	stalkie_big_nohaplotig	exon	20584698	20584825	100	+	.	Parent=FBgn0033476.1.mrna1;Target=FBgn0033476.1 8 135 +
Chr2	stalkie_big_nohaplotig	exon	20613383	20613606	100	+	.	Parent=FBgn0033476.1.mrna1;Target=FBgn0033476.1 136 359 +
Chr2	stalkie_big_nohaplotig	exon	20613682	20613850	100	+	.	Parent=FBgn0033476.1.mrna1;Target=FBgn0033476.1 360 528 +
Chr2	stalkie_big_nohaplotig	exon	20616082	20616252	100	+	.	Parent=FBgn0033476.1.mrna1;Target=FBgn0033476.1 529 699 +
Chr2	stalkie_big_nohaplotig	exon	20616387	20616734	100	+	.	Parent=FBgn0033476.1.mrna1;Target=FBgn0033476.1 700 1047 +
Chr2	stalkie_big_nohaplotig	exon	20616826	20617026	100	+	.	Parent=FBgn0033476.1.mrna1;Target=FBgn0033476.1 1048 1248 +
Chr2	stalkie_big_nohaplotig	exon	20618083	20618214	100	+	.	Parent=FBgn0033476.1.mrna1;Target=FBgn0033476.1 1249 1380 +
Chr2	stalkie_big_nohaplotig	exon	20618289	20618927	100	+	.	Parent=FBgn0033476.1.mrna1;Target=FBgn0033476.1 1381 2019 +
Chr2	stalkie_big_nohaplotig	CDS	20584700	20584825	.	+	0	Parent=FBgn0033476.1.mrna1;Target=FBgn0033476.1 10 135 +
Chr2	stalkie_big_nohaplotig	CDS	20613383	20613606	.	+	0	Parent=FBgn0033476.1.mrna1;Target=FBgn0033476.1 136 359 +
Chr2	stalkie_big_nohaplotig	CDS	20613682	20613850	.	+	1	Parent=FBgn0033476.1.mrna1;Target=FBgn0033476.1 360 528 +
Chr2	stalkie_big_nohaplotig	CDS	20616082	20616252	.	+	0	Parent=FBgn0033476.1.mrna1;Target=FBgn0033476.1 529 699 +
Chr2	stalkie_big_nohaplotig	CDS	20616387	20616734	.	+	0	Parent=FBgn0033476.1.mrna1;Target=FBgn0033476.1 700 1047 +
Chr2	stalkie_big_nohaplotig	CDS	20616826	20617026	.	+	0	Parent=FBgn0033476.1.mrna1;Target=FBgn0033476.1 1048 1248 +
Chr2	stalkie_big_nohaplotig	CDS	20618083	20618214	.	+	0	Parent=FBgn0033476.1.mrna1;Target=FBgn0033476.1 1249 1380 +
Chr2	stalkie_big_nohaplotig	CDS	20618289	20618927	.	+	0	Parent=FBgn0033476.1.mrna1;Target=FBgn0033476.1 1381 2019 +
Chr2	stalkie_big_nohaplotig	mRNA	20620981	20622472	.	-	.	ID=FBgn0033475.2.mrna1;geneID=FBgn0033475.2.path1;Name=FBgn0033475.2;Dir=sensecoverage=100.0;identity=100.0;matches=1053;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015414
Chr2	stalkie_big_nohaplotig	exon	20620981	20621380	100	-	.	Parent=FBgn0033475.2.mrna1;Target=FBgn0033475.2 654 1053 +
Chr2	stalkie_big_nohaplotig	exon	20621576	20621718	100	-	.	Parent=FBgn0033475.2.mrna1;Target=FBgn0033475.2 511 653 +
Chr2	stalkie_big_nohaplotig	exon	20621779	20621921	100	-	.	Parent=FBgn0033475.2.mrna1;Target=FBgn0033475.2 368 510 +
Chr2	stalkie_big_nohaplotig	exon	20621980	20622110	100	-	.	Parent=FBgn0033475.2.mrna1;Target=FBgn0033475.2 237 367 +
Chr2	stalkie_big_nohaplotig	exon	20622183	20622279	100	-	.	Parent=FBgn0033475.2.mrna1;Target=FBgn0033475.2 140 236 +
Chr2	stalkie_big_nohaplotig	exon	20622334	20622472	100	-	.	Parent=FBgn0033475.2.mrna1;Target=FBgn0033475.2 1 139 +
Chr2	stalkie_big_nohaplotig	CDS	20620981	20621380	.	-	1	Parent=FBgn0033475.2.mrna1;Target=FBgn0033475.2 654 1053 +
Chr2	stalkie_big_nohaplotig	CDS	20621576	20621718	.	-	0	Parent=FBgn0033475.2.mrna1;Target=FBgn0033475.2 511 653 +
Chr2	stalkie_big_nohaplotig	CDS	20621779	20621921	.	-	2	Parent=FBgn0033475.2.mrna1;Target=FBgn0033475.2 368 510 +
Chr2	stalkie_big_nohaplotig	CDS	20621980	20622110	.	-	1	Parent=FBgn0033475.2.mrna1;Target=FBgn0033475.2 237 367 +
Chr2	stalkie_big_nohaplotig	CDS	20622183	20622279	.	-	2	Parent=FBgn0033475.2.mrna1;Target=FBgn0033475.2 140 236 +
Chr2	stalkie_big_nohaplotig	CDS	20622334	20622472	.	-	0	Parent=FBgn0033475.2.mrna1;Target=FBgn0033475.2 1 139 +
Chr2	gffcl	locus	20619525	20619910	.	+	.	ID=RLOC_00015415;geneIDs=comp122915_c0_seq1.path1;transcripts=comp122915_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20619525	20619910	.	+	.	ID=comp122915_c0_seq1.mrna1;geneID=comp122915_c0_seq1.path1;Name=comp122915_c0_seq1;Dir=indeterminatecoverage=98.2;identity=99.7;matches=385;mismatches=1;indels=0;unknowns=0;Target=comp122915_c0_seq1 393 8 .;CDS_Target=comp122915_c0_seq1 84 10 .;locus=RLOC_00015415
Chr2	stalkie_big_nohaplotig	exon	20619525	20619910	99	+	.	Parent=comp122915_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	20619527	20619601	.	+	0	Parent=comp122915_c0_seq1.mrna1
Chr2	gffcl	locus	20624581	20626111	.	-	.	ID=RLOC_00015416;geneIDs=FBgn0033475.1.path1;transcripts=FBgn0033475.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20624581	20626111	.	-	.	ID=FBgn0033475.1.mrna1;geneID=FBgn0033475.1.path1;Name=FBgn0033475.1;Dir=sensecoverage=99.8;identity=99.4;matches=1098;mismatches=7;indels=0;unknowns=0;locus=RLOC_00015416
Chr2	stalkie_big_nohaplotig	exon	20624581	20624977	99	-	.	Parent=FBgn0033475.1.mrna1;Target=FBgn0033475.1 711 1107 +
Chr2	stalkie_big_nohaplotig	exon	20625097	20625239	100	-	.	Parent=FBgn0033475.1.mrna1;Target=FBgn0033475.1 568 710 +
Chr2	stalkie_big_nohaplotig	exon	20625297	20625439	99	-	.	Parent=FBgn0033475.1.mrna1;Target=FBgn0033475.1 425 567 +
Chr2	stalkie_big_nohaplotig	exon	20625495	20625613	96	-	.	Parent=FBgn0033475.1.mrna1;Target=FBgn0033475.1 306 424 +
Chr2	stalkie_big_nohaplotig	exon	20625679	20625775	98	-	.	Parent=FBgn0033475.1.mrna1;Target=FBgn0033475.1 209 305 +
Chr2	stalkie_big_nohaplotig	exon	20625830	20625901	100	-	.	Parent=FBgn0033475.1.mrna1;Target=FBgn0033475.1 137 208 +
Chr2	stalkie_big_nohaplotig	exon	20625978	20626111	100	-	.	Parent=FBgn0033475.1.mrna1;Target=FBgn0033475.1 3 136 +
Chr2	stalkie_big_nohaplotig	CDS	20624581	20624977	.	-	1	Parent=FBgn0033475.1.mrna1;Target=FBgn0033475.1 711 1107 +
Chr2	stalkie_big_nohaplotig	CDS	20625097	20625239	.	-	0	Parent=FBgn0033475.1.mrna1;Target=FBgn0033475.1 568 710 +
Chr2	stalkie_big_nohaplotig	CDS	20625297	20625439	.	-	2	Parent=FBgn0033475.1.mrna1;Target=FBgn0033475.1 425 567 +
Chr2	stalkie_big_nohaplotig	CDS	20625495	20625613	.	-	1	Parent=FBgn0033475.1.mrna1;Target=FBgn0033475.1 306 424 +
Chr2	stalkie_big_nohaplotig	CDS	20625679	20625775	.	-	2	Parent=FBgn0033475.1.mrna1;Target=FBgn0033475.1 209 305 +
Chr2	stalkie_big_nohaplotig	CDS	20625830	20625901	.	-	2	Parent=FBgn0033475.1.mrna1;Target=FBgn0033475.1 137 208 +
Chr2	stalkie_big_nohaplotig	CDS	20625978	20626110	.	-	0	Parent=FBgn0033475.1.mrna1;Target=FBgn0033475.1 4 136 +
Chr2	gffcl	locus	20629493	20631501	.	+	.	ID=RLOC_00015417;geneIDs=FBgn0033473.1.path1;transcripts=FBgn0033473.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20629493	20631501	.	+	.	ID=FBgn0033473.1.mrna1;geneID=FBgn0033473.1.path1;Name=FBgn0033473.1;Dir=sensecoverage=100.0;identity=100.0;matches=1533;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015417
Chr2	stalkie_big_nohaplotig	exon	20629493	20630228	100	+	.	Parent=FBgn0033473.1.mrna1;Target=FBgn0033473.1 1 736 +
Chr2	stalkie_big_nohaplotig	exon	20630292	20630938	100	+	.	Parent=FBgn0033473.1.mrna1;Target=FBgn0033473.1 737 1383 +
Chr2	stalkie_big_nohaplotig	exon	20631352	20631501	100	+	.	Parent=FBgn0033473.1.mrna1;Target=FBgn0033473.1 1384 1533 +
Chr2	stalkie_big_nohaplotig	CDS	20629493	20630228	.	+	0	Parent=FBgn0033473.1.mrna1;Target=FBgn0033473.1 1 736 +
Chr2	stalkie_big_nohaplotig	CDS	20630292	20630938	.	+	2	Parent=FBgn0033473.1.mrna1;Target=FBgn0033473.1 737 1383 +
Chr2	stalkie_big_nohaplotig	CDS	20631352	20631501	.	+	0	Parent=FBgn0033473.1.mrna1;Target=FBgn0033473.1 1384 1533 +
Chr2	gffcl	locus	20635791	20638032	.	+	.	ID=RLOC_00015418;geneIDs=comp160875_c0_seq1.path1;transcripts=comp160875_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20635791	20638032	.	+	.	ID=comp160875_c0_seq1.mrna1;geneID=comp160875_c0_seq1.path1;Name=comp160875_c0_seq1;Dir=indeterminatecoverage=99.8;identity=94.6;matches=2176;mismatches=26;indels=98;unknowns=0;Target=comp160875_c0_seq1 2262 3 .;CDS_Target=comp160875_c0_seq1 1787 1665 .;locus=RLOC_00015418
Chr2	stalkie_big_nohaplotig	exon	20635791	20638032	94	+	.	Parent=comp160875_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	20637399	20637557	.	+	0	Parent=comp160875_c0_seq1.mrna1
Chr2	gffcl	locus	20639936	20640572	.	-	.	ID=RLOC_00015420;geneIDs=comp151399_c0_seq1.path1;transcripts=comp151399_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20639936	20640572	.	-	.	ID=comp151399_c0_seq1.mrna1;geneID=comp151399_c0_seq1.path1;Name=comp151399_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=627;mismatches=10;indels=3;unknowns=0;Target=comp151399_c0_seq1 640 1 .;CDS_Target=comp151399_c0_seq1 313 260 .;locus=RLOC_00015420
Chr2	stalkie_big_nohaplotig	exon	20639936	20640572	97	-	.	Parent=comp151399_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	20640260	20640313	.	-	0	Parent=comp151399_c0_seq1.mrna1
Chr2	gffcl	locus	20649863	20650109	.	-	.	ID=RLOC_00015421;geneIDs=comp146092_c1_seq1.path1;transcripts=comp146092_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20649863	20650109	.	-	.	ID=comp146092_c1_seq1.mrna1;geneID=comp146092_c1_seq1.path1;Name=comp146092_c1_seq1;Dir=indeterminatecoverage=81.2;identity=100.0;matches=247;mismatches=0;indels=0;unknowns=0;Target=comp146092_c1_seq1 304 58 .;CDS_Target=comp146092_c1_seq1 131 60 .;locus=RLOC_00015421
Chr2	stalkie_big_nohaplotig	exon	20649863	20650109	100	-	.	Parent=comp146092_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	20650036	20650107	.	-	0	Parent=comp146092_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21004021	21030907	.	-	.	ID=comp145146_c0_seq1.mrna1;geneID=comp145146_c0_seq1.path1;Name=comp145146_c0_seq1;Dir=indeterminatecoverage=86.1;identity=99.7;matches=1753;mismatches=5;indels=1;unknowns=0;Target=comp145146_c0_seq1 311 237 .;locus=RLOC_00015422
Chr2	stalkie_big_nohaplotig	exon	21004021	21004027	100	-	.	Parent=comp145146_c0_seq1.mrna1;Target=comp145146_c0_seq1 1759 1753 .
Chr2	stalkie_big_nohaplotig	exon	21010264	21010267	100	-	.	Parent=comp145146_c0_seq1.mrna1;Target=comp145146_c0_seq1 1752 1749 .
Chr2	stalkie_big_nohaplotig	exon	21012706	21012709	100	-	.	Parent=comp145146_c0_seq1.mrna1;Target=comp145146_c0_seq1 1748 1745 .
Chr2	stalkie_big_nohaplotig	exon	21012929	21012937	100	-	.	Parent=comp145146_c0_seq1.mrna1;Target=comp145146_c0_seq1 1744 1736 .
Chr2	stalkie_big_nohaplotig	exon	21014716	21014725	100	-	.	Parent=comp145146_c0_seq1.mrna1;Target=comp145146_c0_seq1 1735 1726 .
Chr2	stalkie_big_nohaplotig	exon	21016126	21016131	100	-	.	Parent=comp145146_c0_seq1.mrna1;Target=comp145146_c0_seq1 1725 1720 .
Chr2	stalkie_big_nohaplotig	exon	21019640	21019645	100	-	.	Parent=comp145146_c0_seq1.mrna1;Target=comp145146_c0_seq1 1719 1714 .
Chr2	stalkie_big_nohaplotig	exon	21024954	21024961	100	-	.	Parent=comp145146_c0_seq1.mrna1;Target=comp145146_c0_seq1 1713 1706 .
Chr2	stalkie_big_nohaplotig	exon	21029204	21030907	99	-	.	Parent=comp145146_c0_seq1.mrna1;Target=comp145146_c0_seq1 1705 1 .
Chr2	stalkie_big_nohaplotig	CDS	21030598	21030671	.	-	0	Parent=comp145146_c0_seq1.mrna1
Chr2	gffcl	locus	20709759	20763508	.	+	.	ID=RLOC_00015423;geneIDs=FBgn0022382.1.path1;transcripts=FBgn0022382.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20709759	20763508	.	+	.	ID=FBgn0022382.1.mrna1;geneID=FBgn0022382.1.path1;Name=FBgn0022382.1;Dir=sensecoverage=100.0;identity=100.0;matches=1194;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015423
Chr2	stalkie_big_nohaplotig	exon	20709759	20709814	100	+	.	Parent=FBgn0022382.1.mrna1;Target=FBgn0022382.1 1 56 +
Chr2	stalkie_big_nohaplotig	exon	20727437	20727663	100	+	.	Parent=FBgn0022382.1.mrna1;Target=FBgn0022382.1 57 283 +
Chr2	stalkie_big_nohaplotig	exon	20750184	20750362	100	+	.	Parent=FBgn0022382.1.mrna1;Target=FBgn0022382.1 284 462 +
Chr2	stalkie_big_nohaplotig	exon	20750646	20750746	100	+	.	Parent=FBgn0022382.1.mrna1;Target=FBgn0022382.1 463 563 +
Chr2	stalkie_big_nohaplotig	exon	20752932	20753027	100	+	.	Parent=FBgn0022382.1.mrna1;Target=FBgn0022382.1 564 659 +
Chr2	stalkie_big_nohaplotig	exon	20755228	20755375	100	+	.	Parent=FBgn0022382.1.mrna1;Target=FBgn0022382.1 660 807 +
Chr2	stalkie_big_nohaplotig	exon	20759289	20759364	100	+	.	Parent=FBgn0022382.1.mrna1;Target=FBgn0022382.1 808 883 +
Chr2	stalkie_big_nohaplotig	exon	20759459	20759641	100	+	.	Parent=FBgn0022382.1.mrna1;Target=FBgn0022382.1 884 1066 +
Chr2	stalkie_big_nohaplotig	exon	20763381	20763508	100	+	.	Parent=FBgn0022382.1.mrna1;Target=FBgn0022382.1 1067 1194 +
Chr2	stalkie_big_nohaplotig	CDS	20709759	20709814	.	+	0	Parent=FBgn0022382.1.mrna1;Target=FBgn0022382.1 1 56 +
Chr2	stalkie_big_nohaplotig	CDS	20727437	20727663	.	+	1	Parent=FBgn0022382.1.mrna1;Target=FBgn0022382.1 57 283 +
Chr2	stalkie_big_nohaplotig	CDS	20750184	20750362	.	+	2	Parent=FBgn0022382.1.mrna1;Target=FBgn0022382.1 284 462 +
Chr2	stalkie_big_nohaplotig	CDS	20750646	20750746	.	+	0	Parent=FBgn0022382.1.mrna1;Target=FBgn0022382.1 463 563 +
Chr2	stalkie_big_nohaplotig	CDS	20752932	20753027	.	+	1	Parent=FBgn0022382.1.mrna1;Target=FBgn0022382.1 564 659 +
Chr2	stalkie_big_nohaplotig	CDS	20755228	20755375	.	+	1	Parent=FBgn0022382.1.mrna1;Target=FBgn0022382.1 660 807 +
Chr2	stalkie_big_nohaplotig	CDS	20759289	20759364	.	+	0	Parent=FBgn0022382.1.mrna1;Target=FBgn0022382.1 808 883 +
Chr2	stalkie_big_nohaplotig	CDS	20759459	20759641	.	+	2	Parent=FBgn0022382.1.mrna1;Target=FBgn0022382.1 884 1066 +
Chr2	stalkie_big_nohaplotig	CDS	20763381	20763508	.	+	2	Parent=FBgn0022382.1.mrna1;Target=FBgn0022382.1 1067 1194 +
Chr2	gffcl	locus	20764521	20765260	.	+	.	ID=RLOC_00015424;geneIDs=comp153164_c0_seq1.path1;transcripts=comp153164_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20764521	20765260	.	+	.	ID=comp153164_c0_seq1.mrna1;geneID=comp153164_c0_seq1.path1;Name=comp153164_c0_seq1;Dir=indeterminatecoverage=98.5;identity=98.2;matches=727;mismatches=0;indels=13;unknowns=0;Target=comp153164_c0_seq1 738 12 .;CDS_Target=comp153164_c0_seq1 430 344 .;locus=RLOC_00015424
Chr2	stalkie_big_nohaplotig	exon	20764521	20765260	98	+	.	Parent=comp153164_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	20764866	20764952	.	+	0	Parent=comp153164_c0_seq1.mrna1
Chr2	gffcl	locus	20765262	20765892	.	+	.	ID=RLOC_00015425;geneIDs=comp143178_c0_seq1.path1;transcripts=comp143178_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20765262	20765892	.	+	.	ID=comp143178_c0_seq1.mrna1;geneID=comp143178_c0_seq1.path1;Name=comp143178_c0_seq1;Dir=indeterminatecoverage=98.0;identity=96.4;matches=608;mismatches=23;indels=0;unknowns=0;Target=comp143178_c0_seq1 644 14 .;CDS_Target=comp143178_c0_seq1 443 327 .;locus=RLOC_00015425
Chr2	stalkie_big_nohaplotig	exon	20765262	20765892	96	+	.	Parent=comp143178_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	20765575	20765691	.	+	0	Parent=comp143178_c0_seq1.mrna1
Chr2	gffcl	locus	20766295	22556167	.	.	.	ID=RLOC_00015426;geneIDs=comp149046_c0_seq1.path1,comp152115_c0_seq1.path1,comp163644_c0_seq1.path1;transcripts=comp163644_c0_seq1.mrna1,comp149046_c0_seq1.mrna1,comp152115_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20766295	22556167	.	+	.	ID=comp163644_c0_seq1.mrna1;geneID=comp163644_c0_seq1.path1;Name=comp163644_c0_seq1;Dir=indeterminatecoverage=90.8;identity=96.6;matches=2024;mismatches=30;indels=41;unknowns=0;Target=comp163644_c0_seq1 1552 1448 .;locus=RLOC_00015426
Chr2	stalkie_big_nohaplotig	exon	20766295	20768096	99	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 1816 15 .
Chr2	stalkie_big_nohaplotig	exon	20768117	20768149	66	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 1870 1846 .
Chr2	stalkie_big_nohaplotig	exon	22437681	22437687	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 1877 1871 .
Chr2	stalkie_big_nohaplotig	exon	22439753	22439755	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 1880 1878 .
Chr2	stalkie_big_nohaplotig	exon	22443721	22443723	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 1883 1881 .
Chr2	stalkie_big_nohaplotig	exon	22458505	22458507	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 1886 1884 .
Chr2	stalkie_big_nohaplotig	exon	22463354	22463356	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 1889 1887 .
Chr2	stalkie_big_nohaplotig	exon	22468914	22468919	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 1895 1890 .
Chr2	stalkie_big_nohaplotig	exon	22473740	22473748	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 1904 1896 .
Chr2	stalkie_big_nohaplotig	exon	22474621	22474622	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 1906 1905 .
Chr2	stalkie_big_nohaplotig	exon	22476264	22476267	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 1910 1907 .
Chr2	stalkie_big_nohaplotig	exon	22481835	22481838	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 1914 1911 .
Chr2	stalkie_big_nohaplotig	exon	22483440	22483446	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 1921 1915 .
Chr2	stalkie_big_nohaplotig	exon	22487192	22487201	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 1931 1922 .
Chr2	stalkie_big_nohaplotig	exon	22489090	22489094	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 1936 1932 .
Chr2	stalkie_big_nohaplotig	exon	22493994	22494033	57	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 1976 1937 .
Chr2	stalkie_big_nohaplotig	exon	22495155	22495162	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 1993 1986 .
Chr2	stalkie_big_nohaplotig	exon	22495170	22495171	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 2000 1999 .
Chr2	stalkie_big_nohaplotig	exon	22502316	22502320	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 2005 2001 .
Chr2	stalkie_big_nohaplotig	exon	22507943	22507947	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 2010 2006 .
Chr2	stalkie_big_nohaplotig	exon	22536485	22536491	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 2017 2011 .
Chr2	stalkie_big_nohaplotig	exon	22536853	22536855	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 2020 2018 .
Chr2	stalkie_big_nohaplotig	exon	22540220	22540224	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 2025 2021 .
Chr2	stalkie_big_nohaplotig	exon	22541799	22541810	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 2037 2026 .
Chr2	stalkie_big_nohaplotig	exon	22541848	22541849	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 2080 2079 .
Chr2	stalkie_big_nohaplotig	exon	22542910	22542918	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 2089 2081 .
Chr2	stalkie_big_nohaplotig	exon	22545670	22545674	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 2094 2090 .
Chr2	stalkie_big_nohaplotig	exon	22549380	22549387	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 2102 2095 .
Chr2	stalkie_big_nohaplotig	exon	22549422	22549430	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 2149 2141 .
Chr2	stalkie_big_nohaplotig	exon	22550120	22550127	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 2162 2155 .
Chr2	stalkie_big_nohaplotig	exon	22550131	22550132	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 2205 2204 .
Chr2	stalkie_big_nohaplotig	exon	22550204	22550214	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 2216 2206 .
Chr2	stalkie_big_nohaplotig	exon	22550253	22550292	22	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 2262 2254 .
Chr2	stalkie_big_nohaplotig	exon	22556156	22556167	100	+	.	Parent=comp163644_c0_seq1.mrna1;Target=comp163644_c0_seq1 2274 2263 .
Chr2	stalkie_big_nohaplotig	CDS	20767727	20767831	.	+	0	Parent=comp163644_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20768063	20768801	.	-	.	ID=comp149046_c0_seq1.mrna1;geneID=comp149046_c0_seq1.path1;Name=comp149046_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=736;mismatches=3;indels=0;unknowns=0;Target=comp149046_c0_seq1 739 1 .;CDS_Target=comp149046_c0_seq1 671 501 .;locus=RLOC_00015426
Chr2	stalkie_big_nohaplotig	exon	20768063	20768801	99	-	.	Parent=comp149046_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	20768131	20768301	.	-	0	Parent=comp149046_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22550150	22550847	.	-	.	ID=comp152115_c0_seq1.mrna1;geneID=comp152115_c0_seq1.path1;Name=comp152115_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.4;matches=694;mismatches=4;indels=0;unknowns=0;Target=comp152115_c0_seq1 698 1 .;CDS_Target=comp152115_c0_seq1 441 31 .;locus=RLOC_00015426
Chr2	stalkie_big_nohaplotig	exon	22550150	22550847	99	-	.	Parent=comp152115_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	22550407	22550817	.	-	0	Parent=comp152115_c0_seq1.mrna1
Chr2	gffcl	locus	20773810	20778682	.	-	.	ID=RLOC_00015427;geneIDs=FBgn0261014.1.path1;transcripts=FBgn0261014.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20773810	20778682	.	-	.	ID=FBgn0261014.1.mrna1;geneID=FBgn0261014.1.path1;Name=FBgn0261014.1;Dir=sensecoverage=100.0;identity=100.0;matches=2415;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015427
Chr2	stalkie_big_nohaplotig	exon	20773810	20773900	100	-	.	Parent=FBgn0261014.1.mrna1;Target=FBgn0261014.1 2325 2415 +
Chr2	stalkie_big_nohaplotig	exon	20773966	20774120	100	-	.	Parent=FBgn0261014.1.mrna1;Target=FBgn0261014.1 2170 2324 +
Chr2	stalkie_big_nohaplotig	exon	20774181	20774779	100	-	.	Parent=FBgn0261014.1.mrna1;Target=FBgn0261014.1 1571 2169 +
Chr2	stalkie_big_nohaplotig	exon	20774869	20775859	100	-	.	Parent=FBgn0261014.1.mrna1;Target=FBgn0261014.1 580 1570 +
Chr2	stalkie_big_nohaplotig	exon	20775924	20776370	100	-	.	Parent=FBgn0261014.1.mrna1;Target=FBgn0261014.1 133 579 +
Chr2	stalkie_big_nohaplotig	exon	20777815	20777917	100	-	.	Parent=FBgn0261014.1.mrna1;Target=FBgn0261014.1 30 132 +
Chr2	stalkie_big_nohaplotig	exon	20778654	20778682	100	-	.	Parent=FBgn0261014.1.mrna1;Target=FBgn0261014.1 1 29 +
Chr2	stalkie_big_nohaplotig	CDS	20773810	20773900	.	-	1	Parent=FBgn0261014.1.mrna1;Target=FBgn0261014.1 2325 2415 +
Chr2	stalkie_big_nohaplotig	CDS	20773966	20774120	.	-	0	Parent=FBgn0261014.1.mrna1;Target=FBgn0261014.1 2170 2324 +
Chr2	stalkie_big_nohaplotig	CDS	20774181	20774779	.	-	2	Parent=FBgn0261014.1.mrna1;Target=FBgn0261014.1 1571 2169 +
Chr2	stalkie_big_nohaplotig	CDS	20774869	20775859	.	-	0	Parent=FBgn0261014.1.mrna1;Target=FBgn0261014.1 580 1570 +
Chr2	stalkie_big_nohaplotig	CDS	20775924	20776370	.	-	0	Parent=FBgn0261014.1.mrna1;Target=FBgn0261014.1 133 579 +
Chr2	stalkie_big_nohaplotig	CDS	20777815	20777917	.	-	1	Parent=FBgn0261014.1.mrna1;Target=FBgn0261014.1 30 132 +
Chr2	stalkie_big_nohaplotig	CDS	20778654	20778682	.	-	0	Parent=FBgn0261014.1.mrna1;Target=FBgn0261014.1 1 29 +
Chr2	gffcl	locus	20887750	20894715	.	+	.	ID=RLOC_00015428;geneIDs=FBgn0033304.1.path1;transcripts=FBgn0033304.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20887750	20894715	.	+	.	ID=FBgn0033304.1.mrna1;geneID=FBgn0033304.1.path1;Name=FBgn0033304.1;Dir=sensecoverage=100.0;identity=98.7;matches=1510;mismatches=20;indels=0;unknowns=0;locus=RLOC_00015428
Chr2	stalkie_big_nohaplotig	exon	20887750	20888866	98	+	.	Parent=FBgn0033304.1.mrna1;Target=FBgn0033304.1 1 1117 +
Chr2	stalkie_big_nohaplotig	exon	20888938	20889228	99	+	.	Parent=FBgn0033304.1.mrna1;Target=FBgn0033304.1 1118 1408 +
Chr2	stalkie_big_nohaplotig	exon	20894594	20894715	99	+	.	Parent=FBgn0033304.1.mrna1;Target=FBgn0033304.1 1409 1530 +
Chr2	stalkie_big_nohaplotig	CDS	20887750	20888866	.	+	0	Parent=FBgn0033304.1.mrna1;Target=FBgn0033304.1 1 1117 +
Chr2	stalkie_big_nohaplotig	CDS	20888938	20889228	.	+	2	Parent=FBgn0033304.1.mrna1;Target=FBgn0033304.1 1118 1408 +
Chr2	stalkie_big_nohaplotig	CDS	20894594	20894715	.	+	2	Parent=FBgn0033304.1.mrna1;Target=FBgn0033304.1 1409 1530 +
Chr2	gffcl	locus	20988154	20990210	.	+	.	ID=RLOC_00015429;geneIDs=FBgn0034022.path1;transcripts=FBgn0034022.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	20988154	20990210	.	+	.	ID=FBgn0034022.mrna1;geneID=FBgn0034022.path1;Name=FBgn0034022;Dir=sensecoverage=100.0;identity=100.0;matches=1995;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015429
Chr2	stalkie_big_nohaplotig	exon	20988154	20989958	100	+	.	Parent=FBgn0034022.mrna1;Target=FBgn0034022 1 1805 +
Chr2	stalkie_big_nohaplotig	exon	20990021	20990210	100	+	.	Parent=FBgn0034022.mrna1;Target=FBgn0034022 1806 1995 +
Chr2	stalkie_big_nohaplotig	CDS	20988154	20989958	.	+	0	Parent=FBgn0034022.mrna1;Target=FBgn0034022 1 1805 +
Chr2	stalkie_big_nohaplotig	CDS	20990021	20990210	.	+	1	Parent=FBgn0034022.mrna1;Target=FBgn0034022 1806 1995 +
Chr2	gffcl	locus	21006379	21028560	.	+	.	ID=RLOC_00015430;geneIDs=FBgn0004638.1.path1;transcripts=FBgn0004638.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21006379	21028560	.	+	.	ID=FBgn0004638.1.mrna1;geneID=FBgn0004638.1.path1;Name=FBgn0004638.1;Dir=sensecoverage=100.0;identity=100.0;matches=654;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015430
Chr2	stalkie_big_nohaplotig	exon	21006379	21006477	100	+	.	Parent=FBgn0004638.1.mrna1;Target=FBgn0004638.1 1 99 +
Chr2	stalkie_big_nohaplotig	exon	21026963	21027060	100	+	.	Parent=FBgn0004638.1.mrna1;Target=FBgn0004638.1 100 197 +
Chr2	stalkie_big_nohaplotig	exon	21027260	21027379	100	+	.	Parent=FBgn0004638.1.mrna1;Target=FBgn0004638.1 198 317 +
Chr2	stalkie_big_nohaplotig	exon	21027467	21027632	100	+	.	Parent=FBgn0004638.1.mrna1;Target=FBgn0004638.1 318 483 +
Chr2	stalkie_big_nohaplotig	exon	21028390	21028560	100	+	.	Parent=FBgn0004638.1.mrna1;Target=FBgn0004638.1 484 654 +
Chr2	stalkie_big_nohaplotig	CDS	21006379	21006477	.	+	0	Parent=FBgn0004638.1.mrna1;Target=FBgn0004638.1 1 99 +
Chr2	stalkie_big_nohaplotig	CDS	21026963	21027060	.	+	0	Parent=FBgn0004638.1.mrna1;Target=FBgn0004638.1 100 197 +
Chr2	stalkie_big_nohaplotig	CDS	21027260	21027379	.	+	1	Parent=FBgn0004638.1.mrna1;Target=FBgn0004638.1 198 317 +
Chr2	stalkie_big_nohaplotig	CDS	21027467	21027632	.	+	1	Parent=FBgn0004638.1.mrna1;Target=FBgn0004638.1 318 483 +
Chr2	stalkie_big_nohaplotig	CDS	21028390	21028560	.	+	0	Parent=FBgn0004638.1.mrna1;Target=FBgn0004638.1 484 654 +
Chr2	gffcl	locus	21025099	21025339	.	+	.	ID=RLOC_00015431;geneIDs=comp148467_c0_seq1.path1;transcripts=comp148467_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21025099	21025339	.	+	.	ID=comp148467_c0_seq1.mrna1;geneID=comp148467_c0_seq1.path1;Name=comp148467_c0_seq1;Dir=indeterminatecoverage=93.8;identity=98.8;matches=238;mismatches=2;indels=1;unknowns=0;Target=comp148467_c0_seq1 240 1 .;CDS_Target=comp148467_c0_seq1 101 3 .;locus=RLOC_00015431
Chr2	stalkie_big_nohaplotig	exon	21025099	21025339	98	+	.	Parent=comp148467_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	21025101	21025199	.	+	0	Parent=comp148467_c0_seq1.mrna1
Chr2	gffcl	locus	21031083	21031219	.	+	.	ID=RLOC_00015433;geneIDs=comp621448_c0_seq1.path1;transcripts=comp621448_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21031083	21031219	.	+	.	ID=comp621448_c0_seq1.mrna1;geneID=comp621448_c0_seq1.path1;Name=comp621448_c0_seq1;Dir=indeterminatecoverage=65.2;identity=100.0;matches=137;mismatches=0;indels=0;unknowns=0;Target=comp621448_c0_seq1 208 72 .;CDS_Target=comp621448_c0_seq1 121 74 .;locus=RLOC_00015433
Chr2	stalkie_big_nohaplotig	exon	21031083	21031219	100	+	.	Parent=comp621448_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	21031085	21031132	.	+	0	Parent=comp621448_c0_seq1.mrna1
Chr2	gffcl	locus	21034262	21059656	.	+	.	ID=RLOC_00015434;geneIDs=FBgn0033844.1.path1;transcripts=FBgn0033844.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21034262	21059656	.	+	.	ID=FBgn0033844.1.mrna1;geneID=FBgn0033844.1.path1;Name=FBgn0033844.1;Dir=sensecoverage=100.0;identity=100.0;matches=1284;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015434
Chr2	stalkie_big_nohaplotig	exon	21034262	21034491	100	+	.	Parent=FBgn0033844.1.mrna1;Target=FBgn0033844.1 1 230 +
Chr2	stalkie_big_nohaplotig	exon	21047537	21047777	100	+	.	Parent=FBgn0033844.1.mrna1;Target=FBgn0033844.1 231 471 +
Chr2	stalkie_big_nohaplotig	exon	21047839	21047997	100	+	.	Parent=FBgn0033844.1.mrna1;Target=FBgn0033844.1 472 630 +
Chr2	stalkie_big_nohaplotig	exon	21055829	21055960	100	+	.	Parent=FBgn0033844.1.mrna1;Target=FBgn0033844.1 631 762 +
Chr2	stalkie_big_nohaplotig	exon	21058348	21058506	100	+	.	Parent=FBgn0033844.1.mrna1;Target=FBgn0033844.1 763 921 +
Chr2	stalkie_big_nohaplotig	exon	21059223	21059387	100	+	.	Parent=FBgn0033844.1.mrna1;Target=FBgn0033844.1 922 1086 +
Chr2	stalkie_big_nohaplotig	exon	21059459	21059656	100	+	.	Parent=FBgn0033844.1.mrna1;Target=FBgn0033844.1 1087 1284 +
Chr2	stalkie_big_nohaplotig	CDS	21034262	21034491	.	+	0	Parent=FBgn0033844.1.mrna1;Target=FBgn0033844.1 1 230 +
Chr2	stalkie_big_nohaplotig	CDS	21047537	21047777	.	+	1	Parent=FBgn0033844.1.mrna1;Target=FBgn0033844.1 231 471 +
Chr2	stalkie_big_nohaplotig	CDS	21047839	21047997	.	+	0	Parent=FBgn0033844.1.mrna1;Target=FBgn0033844.1 472 630 +
Chr2	stalkie_big_nohaplotig	CDS	21055829	21055960	.	+	0	Parent=FBgn0033844.1.mrna1;Target=FBgn0033844.1 631 762 +
Chr2	stalkie_big_nohaplotig	CDS	21058348	21058506	.	+	0	Parent=FBgn0033844.1.mrna1;Target=FBgn0033844.1 763 921 +
Chr2	stalkie_big_nohaplotig	CDS	21059223	21059387	.	+	0	Parent=FBgn0033844.1.mrna1;Target=FBgn0033844.1 922 1086 +
Chr2	stalkie_big_nohaplotig	CDS	21059459	21059656	.	+	0	Parent=FBgn0033844.1.mrna1;Target=FBgn0033844.1 1087 1284 +
Chr2	gffcl	locus	21041122	21041726	.	-	.	ID=RLOC_00015435;geneIDs=comp147717_c0_seq1.path1;transcripts=comp147717_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21041122	21041726	.	-	.	ID=comp147717_c0_seq1.mrna1;geneID=comp147717_c0_seq1.path1;Name=comp147717_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=601;mismatches=4;indels=1;unknowns=0;Target=comp147717_c0_seq1 606 1 .;CDS_Target=comp147717_c0_seq1 145 44 .;locus=RLOC_00015435
Chr2	stalkie_big_nohaplotig	exon	21041122	21041726	99	-	.	Parent=comp147717_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	21041582	21041683	.	-	0	Parent=comp147717_c0_seq1.mrna1
Chr2	gffcl	locus	21050644	21051771	.	+	.	ID=RLOC_00015436;geneIDs=comp157114_c0_seq1.path1;transcripts=comp157114_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21050644	21051771	.	+	.	ID=comp157114_c0_seq1.mrna1;geneID=comp157114_c0_seq1.path1;Name=comp157114_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=1114;mismatches=14;indels=2;unknowns=0;Target=comp157114_c0_seq1 1130 1 .;CDS_Target=comp157114_c0_seq1 1130 1044 .;locus=RLOC_00015436
Chr2	stalkie_big_nohaplotig	exon	21050644	21051771	98	+	.	Parent=comp157114_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	21051685	21051771	.	+	0	Parent=comp157114_c0_seq1.mrna1
Chr2	gffcl	locus	21053995	21054302	.	-	.	ID=RLOC_00015437;geneIDs=comp137777_c0_seq1.path1;transcripts=comp137777_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21053995	21054302	.	-	.	ID=comp137777_c0_seq1.mrna1;geneID=comp137777_c0_seq1.path1;Name=comp137777_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=307;mismatches=1;indels=0;unknowns=0;Target=comp137777_c0_seq1 308 1 .;CDS_Target=comp137777_c0_seq1 235 158 .;locus=RLOC_00015437
Chr2	stalkie_big_nohaplotig	exon	21053995	21054302	99	-	.	Parent=comp137777_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	21054068	21054145	.	-	0	Parent=comp137777_c0_seq1.mrna1
Chr2	gffcl	locus	21061171	21061797	.	-	.	ID=RLOC_00015438;geneIDs=comp149801_c0_seq1.path1;transcripts=comp149801_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21061171	21061797	.	-	.	ID=comp149801_c0_seq1.mrna1;geneID=comp149801_c0_seq1.path1;Name=comp149801_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=626;mismatches=1;indels=0;unknowns=0;Target=comp149801_c0_seq1 627 1 .;CDS_Target=comp149801_c0_seq1 253 146 .;locus=RLOC_00015438
Chr2	stalkie_big_nohaplotig	exon	21061171	21061797	99	-	.	Parent=comp149801_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	21061545	21061652	.	-	0	Parent=comp149801_c0_seq1.mrna1
Chr2	gffcl	locus	21062589	21063093	.	+	.	ID=RLOC_00015439;geneIDs=comp144895_c0_seq1.path1;transcripts=comp144895_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21062589	21063093	.	+	.	ID=comp144895_c0_seq1.mrna1;geneID=comp144895_c0_seq1.path1;Name=comp144895_c0_seq1;Dir=indeterminatecoverage=66.4;identity=99.8;matches=504;mismatches=1;indels=0;unknowns=0;Target=comp144895_c0_seq1 531 27 .;CDS_Target=comp144895_c0_seq1 435 298 .;locus=RLOC_00015439
Chr2	stalkie_big_nohaplotig	exon	21062589	21063093	99	+	.	Parent=comp144895_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	21062860	21062997	.	+	0	Parent=comp144895_c0_seq1.mrna1
Chr2	gffcl	locus	21064945	21065968	.	-	.	ID=RLOC_00015440;geneIDs=comp135251_c0_seq1.path1;transcripts=comp135251_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21064945	21065968	.	-	.	ID=comp135251_c0_seq1.mrna1;geneID=comp135251_c0_seq1.path1;Name=comp135251_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=1022;mismatches=2;indels=0;unknowns=0;Target=comp135251_c0_seq1 1024 1 .;CDS_Target=comp135251_c0_seq1 919 266 .;locus=RLOC_00015440
Chr2	stalkie_big_nohaplotig	exon	21064945	21065968	99	-	.	Parent=comp135251_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	21065050	21065703	.	-	0	Parent=comp135251_c0_seq1.mrna1
Chr2	gffcl	locus	21071060	21072265	.	-	.	ID=RLOC_00015441;geneIDs=comp149444_c0_seq1.path1;transcripts=comp149444_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21071060	21072265	.	-	.	ID=comp149444_c0_seq1.mrna1;geneID=comp149444_c0_seq1.path1;Name=comp149444_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=290;mismatches=0;indels=1;unknowns=0;Target=comp149444_c0_seq1 109 216 +;locus=RLOC_00015441
Chr2	stalkie_big_nohaplotig	exon	21071060	21071312	99	-	.	Parent=comp149444_c0_seq1.mrna1;Target=comp149444_c0_seq1 38 291 +
Chr2	stalkie_big_nohaplotig	exon	21072229	21072265	100	-	.	Parent=comp149444_c0_seq1.mrna1;Target=comp149444_c0_seq1 1 37 +
Chr2	stalkie_big_nohaplotig	CDS	21071134	21071241	.	-	0	Parent=comp149444_c0_seq1.mrna1
Chr2	gffcl	locus	21127446	21132540	.	+	.	ID=RLOC_00015442;geneIDs=FBgn0000119.1.path1;transcripts=FBgn0000119.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21127446	21132540	.	+	.	ID=FBgn0000119.1.mrna1;geneID=FBgn0000119.1.path1;Name=FBgn0000119.1;Dir=sensecoverage=91.5;identity=99.7;matches=4831;mismatches=13;indels=0;unknowns=0;locus=RLOC_00015442
Chr2	stalkie_big_nohaplotig	exon	21127446	21130426	99	+	.	Parent=FBgn0000119.1.mrna1;Target=FBgn0000119.1 449 3429 +
Chr2	stalkie_big_nohaplotig	exon	21130490	21130650	100	+	.	Parent=FBgn0000119.1.mrna1;Target=FBgn0000119.1 3430 3590 +
Chr2	stalkie_big_nohaplotig	exon	21130713	21130982	100	+	.	Parent=FBgn0000119.1.mrna1;Target=FBgn0000119.1 3591 3860 +
Chr2	stalkie_big_nohaplotig	exon	21131042	21131669	100	+	.	Parent=FBgn0000119.1.mrna1;Target=FBgn0000119.1 3861 4488 +
Chr2	stalkie_big_nohaplotig	exon	21131737	21132540	100	+	.	Parent=FBgn0000119.1.mrna1;Target=FBgn0000119.1 4489 5292 +
Chr2	stalkie_big_nohaplotig	CDS	21127448	21130426	.	+	0	Parent=FBgn0000119.1.mrna1;Target=FBgn0000119.1 451 3429 +
Chr2	stalkie_big_nohaplotig	CDS	21130490	21130650	.	+	0	Parent=FBgn0000119.1.mrna1;Target=FBgn0000119.1 3430 3590 +
Chr2	stalkie_big_nohaplotig	CDS	21130713	21130982	.	+	1	Parent=FBgn0000119.1.mrna1;Target=FBgn0000119.1 3591 3860 +
Chr2	stalkie_big_nohaplotig	CDS	21131042	21131669	.	+	1	Parent=FBgn0000119.1.mrna1;Target=FBgn0000119.1 3861 4488 +
Chr2	stalkie_big_nohaplotig	CDS	21131737	21132540	.	+	0	Parent=FBgn0000119.1.mrna1;Target=FBgn0000119.1 4489 5292 +
Chr2	gffcl	locus	21134041	21135421	.	-	.	ID=RLOC_00015443;geneIDs=comp154917_c0_seq1.path1;transcripts=comp154917_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21134041	21135421	.	-	.	ID=comp154917_c0_seq1.mrna1;geneID=comp154917_c0_seq1.path1;Name=comp154917_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.1;matches=1369;mismatches=12;indels=0;unknowns=0;Target=comp154917_c0_seq1 1381 1 .;CDS_Target=comp154917_c0_seq1 432 304 .;locus=RLOC_00015443
Chr2	stalkie_big_nohaplotig	exon	21134041	21135421	99	-	.	Parent=comp154917_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	21134990	21135118	.	-	0	Parent=comp154917_c0_seq1.mrna1
Chr2	gffcl	locus	21139226	21142822	.	+	.	ID=RLOC_00015444;geneIDs=FBgn0034381.1.path1;transcripts=FBgn0034381.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21139226	21142822	.	+	.	ID=FBgn0034381.1.mrna1;geneID=FBgn0034381.1.path1;Name=FBgn0034381.1;Dir=sensecoverage=100.0;identity=100.0;matches=1830;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015444
Chr2	stalkie_big_nohaplotig	exon	21139226	21139565	100	+	.	Parent=FBgn0034381.1.mrna1;Target=FBgn0034381.1 1 340 +
Chr2	stalkie_big_nohaplotig	exon	21140906	21141128	100	+	.	Parent=FBgn0034381.1.mrna1;Target=FBgn0034381.1 341 563 +
Chr2	stalkie_big_nohaplotig	exon	21141194	21141464	100	+	.	Parent=FBgn0034381.1.mrna1;Target=FBgn0034381.1 564 834 +
Chr2	stalkie_big_nohaplotig	exon	21141531	21141634	100	+	.	Parent=FBgn0034381.1.mrna1;Target=FBgn0034381.1 835 938 +
Chr2	stalkie_big_nohaplotig	exon	21141698	21141887	100	+	.	Parent=FBgn0034381.1.mrna1;Target=FBgn0034381.1 939 1128 +
Chr2	stalkie_big_nohaplotig	exon	21141945	21142221	100	+	.	Parent=FBgn0034381.1.mrna1;Target=FBgn0034381.1 1129 1405 +
Chr2	stalkie_big_nohaplotig	exon	21142280	21142456	100	+	.	Parent=FBgn0034381.1.mrna1;Target=FBgn0034381.1 1406 1582 +
Chr2	stalkie_big_nohaplotig	exon	21142518	21142615	100	+	.	Parent=FBgn0034381.1.mrna1;Target=FBgn0034381.1 1583 1680 +
Chr2	stalkie_big_nohaplotig	exon	21142673	21142822	100	+	.	Parent=FBgn0034381.1.mrna1;Target=FBgn0034381.1 1681 1830 +
Chr2	stalkie_big_nohaplotig	CDS	21139226	21139565	.	+	0	Parent=FBgn0034381.1.mrna1;Target=FBgn0034381.1 1 340 +
Chr2	stalkie_big_nohaplotig	CDS	21140906	21141128	.	+	2	Parent=FBgn0034381.1.mrna1;Target=FBgn0034381.1 341 563 +
Chr2	stalkie_big_nohaplotig	CDS	21141194	21141464	.	+	1	Parent=FBgn0034381.1.mrna1;Target=FBgn0034381.1 564 834 +
Chr2	stalkie_big_nohaplotig	CDS	21141531	21141634	.	+	0	Parent=FBgn0034381.1.mrna1;Target=FBgn0034381.1 835 938 +
Chr2	stalkie_big_nohaplotig	CDS	21141698	21141887	.	+	1	Parent=FBgn0034381.1.mrna1;Target=FBgn0034381.1 939 1128 +
Chr2	stalkie_big_nohaplotig	CDS	21141945	21142221	.	+	0	Parent=FBgn0034381.1.mrna1;Target=FBgn0034381.1 1129 1405 +
Chr2	stalkie_big_nohaplotig	CDS	21142280	21142456	.	+	2	Parent=FBgn0034381.1.mrna1;Target=FBgn0034381.1 1406 1582 +
Chr2	stalkie_big_nohaplotig	CDS	21142518	21142615	.	+	2	Parent=FBgn0034381.1.mrna1;Target=FBgn0034381.1 1583 1680 +
Chr2	stalkie_big_nohaplotig	CDS	21142673	21142822	.	+	0	Parent=FBgn0034381.1.mrna1;Target=FBgn0034381.1 1681 1830 +
Chr2	gffcl	locus	21144640	21146142	.	-	.	ID=RLOC_00015445;geneIDs=FBgn0033899.1.path1;transcripts=FBgn0033899.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21144640	21146142	.	-	.	ID=FBgn0033899.1.mrna1;geneID=FBgn0033899.1.path1;Name=FBgn0033899.1;Dir=sensecoverage=99.5;identity=99.9;matches=1312;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015445
Chr2	stalkie_big_nohaplotig	exon	21144640	21144894	100	-	.	Parent=FBgn0033899.1.mrna1;Target=FBgn0033899.1 1066 1320 +
Chr2	stalkie_big_nohaplotig	exon	21144962	21145529	100	-	.	Parent=FBgn0033899.1.mrna1;Target=FBgn0033899.1 498 1065 +
Chr2	stalkie_big_nohaplotig	exon	21145588	21145826	100	-	.	Parent=FBgn0033899.1.mrna1;Target=FBgn0033899.1 259 497 +
Chr2	stalkie_big_nohaplotig	exon	21145892	21146142	99	-	.	Parent=FBgn0033899.1.mrna1;Target=FBgn0033899.1 8 258 +
Chr2	stalkie_big_nohaplotig	CDS	21144640	21144894	.	-	0	Parent=FBgn0033899.1.mrna1;Target=FBgn0033899.1 1066 1320 +
Chr2	stalkie_big_nohaplotig	CDS	21144962	21145529	.	-	1	Parent=FBgn0033899.1.mrna1;Target=FBgn0033899.1 498 1065 +
Chr2	stalkie_big_nohaplotig	CDS	21145588	21145826	.	-	0	Parent=FBgn0033899.1.mrna1;Target=FBgn0033899.1 259 497 +
Chr2	stalkie_big_nohaplotig	CDS	21145892	21146140	.	-	0	Parent=FBgn0033899.1.mrna1;Target=FBgn0033899.1 10 258 +
Chr2	gffcl	locus	21146823	21148302	.	-	.	ID=RLOC_00015446;geneIDs=FBgn0033900.1.path1;transcripts=FBgn0033900.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21146823	21148302	.	-	.	ID=FBgn0033900.1.mrna1;geneID=FBgn0033900.1.path1;Name=FBgn0033900.1;Dir=indeterminatecoverage=99.9;identity=99.4;matches=1471;mismatches=9;indels=0;unknowns=0;Target=FBgn0033900.1 1482 3 .;CDS_Target=FBgn0033900.1 1482 4 .;locus=RLOC_00015446
Chr2	stalkie_big_nohaplotig	exon	21146823	21148302	99	-	.	Parent=FBgn0033900.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	21146823	21148301	.	-	0	Parent=FBgn0033900.1.mrna1
Chr2	gffcl	locus	21149315	21149842	.	+	.	ID=RLOC_00015447;geneIDs=FBgn0040751.1.path1;transcripts=FBgn0040751.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21149315	21149842	.	+	.	ID=FBgn0040751.1.mrna1;geneID=FBgn0040751.1.path1;Name=FBgn0040751.1;Dir=sensecoverage=100.0;identity=99.4;matches=313;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015447
Chr2	stalkie_big_nohaplotig	exon	21149315	21149494	98	+	.	Parent=FBgn0040751.1.mrna1;Target=FBgn0040751.1 1 180 +
Chr2	stalkie_big_nohaplotig	exon	21149644	21149739	100	+	.	Parent=FBgn0040751.1.mrna1;Target=FBgn0040751.1 181 276 +
Chr2	stalkie_big_nohaplotig	exon	21149804	21149842	100	+	.	Parent=FBgn0040751.1.mrna1;Target=FBgn0040751.1 277 315 +
Chr2	stalkie_big_nohaplotig	CDS	21149315	21149494	.	+	0	Parent=FBgn0040751.1.mrna1;Target=FBgn0040751.1 1 180 +
Chr2	stalkie_big_nohaplotig	CDS	21149644	21149739	.	+	0	Parent=FBgn0040751.1.mrna1;Target=FBgn0040751.1 181 276 +
Chr2	stalkie_big_nohaplotig	CDS	21149804	21149842	.	+	0	Parent=FBgn0040751.1.mrna1;Target=FBgn0040751.1 277 315 +
Chr2	gffcl	locus	21150701	21151951	.	-	.	ID=RLOC_00015448;geneIDs=FBgn0032750.1.path1;transcripts=FBgn0032750.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21150701	21151951	.	-	.	ID=FBgn0032750.1.mrna1;geneID=FBgn0032750.1.path1;Name=FBgn0032750.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1251;mismatches=0;indels=0;unknowns=0;Target=FBgn0032750.1 1251 1 .;locus=RLOC_00015448
Chr2	stalkie_big_nohaplotig	exon	21150701	21151951	100	-	.	Parent=FBgn0032750.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	21150701	21151951	.	-	0	Parent=FBgn0032750.1.mrna1
Chr2	gffcl	locus	21152715	21161991	.	-	.	ID=RLOC_00015449;geneIDs=FBgn0086895.1.path1;transcripts=FBgn0086895.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21152715	21161991	.	-	.	ID=FBgn0086895.1.mrna1;geneID=FBgn0086895.1.path1;Name=FBgn0086895.1;Dir=sensecoverage=99.9;identity=98.7;matches=3614;mismatches=46;indels=0;unknowns=0;locus=RLOC_00015449
Chr2	stalkie_big_nohaplotig	exon	21152715	21153258	98	-	.	Parent=FBgn0086895.1.mrna1;Target=FBgn0086895.1 3119 3662 +
Chr2	stalkie_big_nohaplotig	exon	21153327	21153801	100	-	.	Parent=FBgn0086895.1.mrna1;Target=FBgn0086895.1 2644 3118 +
Chr2	stalkie_big_nohaplotig	exon	21153859	21154511	99	-	.	Parent=FBgn0086895.1.mrna1;Target=FBgn0086895.1 1991 2643 +
Chr2	stalkie_big_nohaplotig	exon	21154565	21155423	98	-	.	Parent=FBgn0086895.1.mrna1;Target=FBgn0086895.1 1132 1990 +
Chr2	stalkie_big_nohaplotig	exon	21155483	21155939	99	-	.	Parent=FBgn0086895.1.mrna1;Target=FBgn0086895.1 675 1131 +
Chr2	stalkie_big_nohaplotig	exon	21161320	21161991	96	-	.	Parent=FBgn0086895.1.mrna1;Target=FBgn0086895.1 3 674 +
Chr2	stalkie_big_nohaplotig	CDS	21152717	21153258	.	-	2	Parent=FBgn0086895.1.mrna1;Target=FBgn0086895.1 3119 3660 +
Chr2	stalkie_big_nohaplotig	CDS	21153327	21153801	.	-	0	Parent=FBgn0086895.1.mrna1;Target=FBgn0086895.1 2644 3118 +
Chr2	stalkie_big_nohaplotig	CDS	21153859	21154511	.	-	2	Parent=FBgn0086895.1.mrna1;Target=FBgn0086895.1 1991 2643 +
Chr2	stalkie_big_nohaplotig	CDS	21154565	21155423	.	-	0	Parent=FBgn0086895.1.mrna1;Target=FBgn0086895.1 1132 1990 +
Chr2	stalkie_big_nohaplotig	CDS	21155483	21155939	.	-	1	Parent=FBgn0086895.1.mrna1;Target=FBgn0086895.1 675 1131 +
Chr2	stalkie_big_nohaplotig	CDS	21161320	21161990	.	-	0	Parent=FBgn0086895.1.mrna1;Target=FBgn0086895.1 4 674 +
Chr2	gffcl	locus	21163585	21165297	.	+	.	ID=RLOC_00015450;geneIDs=FBgn0033656.1.path1;transcripts=FBgn0033656.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21163585	21165297	.	+	.	ID=FBgn0033656.1.mrna1;geneID=FBgn0033656.1.path1;Name=FBgn0033656.1;Dir=sensecoverage=100.0;identity=100.0;matches=1593;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015450
Chr2	stalkie_big_nohaplotig	exon	21163585	21163722	100	+	.	Parent=FBgn0033656.1.mrna1;Target=FBgn0033656.1 1 138 +
Chr2	stalkie_big_nohaplotig	exon	21163785	21164222	100	+	.	Parent=FBgn0033656.1.mrna1;Target=FBgn0033656.1 139 576 +
Chr2	stalkie_big_nohaplotig	exon	21164281	21165297	100	+	.	Parent=FBgn0033656.1.mrna1;Target=FBgn0033656.1 577 1593 +
Chr2	stalkie_big_nohaplotig	CDS	21163585	21163722	.	+	0	Parent=FBgn0033656.1.mrna1;Target=FBgn0033656.1 1 138 +
Chr2	stalkie_big_nohaplotig	CDS	21163785	21164222	.	+	0	Parent=FBgn0033656.1.mrna1;Target=FBgn0033656.1 139 576 +
Chr2	stalkie_big_nohaplotig	CDS	21164281	21165297	.	+	0	Parent=FBgn0033656.1.mrna1;Target=FBgn0033656.1 577 1593 +
Chr2	gffcl	locus	21165788	21166166	.	-	.	ID=RLOC_00015451;geneIDs=FBgn0259832.1.path1;transcripts=FBgn0259832.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21165788	21166166	.	-	.	ID=FBgn0259832.1.mrna1;geneID=FBgn0259832.1.path1;Name=FBgn0259832.1;Dir=sensecoverage=100.0;identity=100.0;matches=312;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015451
Chr2	stalkie_big_nohaplotig	exon	21165788	21166021	100	-	.	Parent=FBgn0259832.1.mrna1;Target=FBgn0259832.1 79 312 +
Chr2	stalkie_big_nohaplotig	exon	21166089	21166166	100	-	.	Parent=FBgn0259832.1.mrna1;Target=FBgn0259832.1 1 78 +
Chr2	stalkie_big_nohaplotig	CDS	21165788	21166021	.	-	0	Parent=FBgn0259832.1.mrna1;Target=FBgn0259832.1 79 312 +
Chr2	stalkie_big_nohaplotig	CDS	21166089	21166166	.	-	0	Parent=FBgn0259832.1.mrna1;Target=FBgn0259832.1 1 78 +
Chr2	gffcl	locus	21204652	21208737	.	-	.	ID=RLOC_00015452;geneIDs=comp143112_c0_seq1.path1;transcripts=comp143112_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21204652	21208737	.	-	.	ID=comp143112_c0_seq1.mrna1;geneID=comp143112_c0_seq1.path1;Name=comp143112_c0_seq1;Dir=antisensecoverage=99.1;identity=100.0;matches=426;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015452
Chr2	stalkie_big_nohaplotig	exon	21204652	21204857	100	-	.	Parent=comp143112_c0_seq1.mrna1;Target=comp143112_c0_seq1 5 210 -
Chr2	stalkie_big_nohaplotig	exon	21208518	21208737	100	-	.	Parent=comp143112_c0_seq1.mrna1;Target=comp143112_c0_seq1 211 430 -
Chr2	stalkie_big_nohaplotig	CDS	21204815	21204857	.	-	1	Parent=comp143112_c0_seq1.mrna1;Target=comp143112_c0_seq1 168 210 .
Chr2	stalkie_big_nohaplotig	CDS	21208518	21208735	.	-	0	Parent=comp143112_c0_seq1.mrna1;Target=comp143112_c0_seq1 211 428 .
Chr2	gffcl	locus	21216574	21223547	.	+	.	ID=RLOC_00015453;geneIDs=FBgn0033654.1.path1;transcripts=FBgn0033654.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21216574	21223547	.	+	.	ID=FBgn0033654.1.mrna1;geneID=FBgn0033654.1.path1;Name=FBgn0033654.1;Dir=sensecoverage=94.8;identity=100.0;matches=2423;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015453
Chr2	stalkie_big_nohaplotig	exon	21216574	21217069	99	+	.	Parent=FBgn0033654.1.mrna1;Target=FBgn0033654.1 133 628 +
Chr2	stalkie_big_nohaplotig	exon	21221620	21223547	100	+	.	Parent=FBgn0033654.1.mrna1;Target=FBgn0033654.1 629 2556 +
Chr2	stalkie_big_nohaplotig	CDS	21216574	21217069	.	+	0	Parent=FBgn0033654.1.mrna1;Target=FBgn0033654.1 133 628 +
Chr2	stalkie_big_nohaplotig	CDS	21221620	21223547	.	+	2	Parent=FBgn0033654.1.mrna1;Target=FBgn0033654.1 629 2556 +
Chr2	gffcl	locus	21223535	21249237	.	.	.	ID=RLOC_00015454;geneIDs=comp144082_c0_seq1.path1,comp144933_c0_seq1.path1;transcripts=comp144082_c0_seq1.mrna1,comp144933_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21223535	21249237	.	-	.	ID=comp144082_c0_seq1.mrna1;geneID=comp144082_c0_seq1.path1;Name=comp144082_c0_seq1;Dir=indeterminatecoverage=88.0;identity=100.0;matches=515;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015454
Chr2	stalkie_big_nohaplotig	exon	21223535	21224036	100	-	.	Parent=comp144082_c0_seq1.mrna1;Target=comp144082_c0_seq1 585 84 .
Chr2	stalkie_big_nohaplotig	exon	21228212	21228213	100	-	.	Parent=comp144082_c0_seq1.mrna1;Target=comp144082_c0_seq1 83 82 .
Chr2	stalkie_big_nohaplotig	exon	21236242	21236245	100	-	.	Parent=comp144082_c0_seq1.mrna1;Target=comp144082_c0_seq1 81 78 .
Chr2	stalkie_big_nohaplotig	exon	21249231	21249237	100	-	.	Parent=comp144082_c0_seq1.mrna1;Target=comp144082_c0_seq1 77 71 .
Chr2	stalkie_big_nohaplotig	CDS	21223967	21224036	.	-	1	Parent=comp144082_c0_seq1.mrna1;Target=comp144082_c0_seq1 153 84 .
Chr2	stalkie_big_nohaplotig	CDS	21228212	21228213	.	-	0	Parent=comp144082_c0_seq1.mrna1;Target=comp144082_c0_seq1 83 82 .
Chr2	stalkie_big_nohaplotig	CDS	21236242	21236245	.	-	1	Parent=comp144082_c0_seq1.mrna1;Target=comp144082_c0_seq1 81 78 .
Chr2	stalkie_big_nohaplotig	CDS	21249231	21249235	.	-	0	Parent=comp144082_c0_seq1.mrna1;Target=comp144082_c0_seq1 77 73 .
Chr2	stalkie_big_nohaplotig	mRNA	21224027	21224582	.	+	.	ID=comp144933_c0_seq1.mrna1;geneID=comp144933_c0_seq1.path1;Name=comp144933_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=555;mismatches=1;indels=0;unknowns=0;Target=comp144933_c0_seq1 556 1 .;CDS_Target=comp144933_c0_seq1 456 334 .;locus=RLOC_00015454
Chr2	stalkie_big_nohaplotig	exon	21224027	21224582	99	+	.	Parent=comp144933_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	21224360	21224482	.	+	0	Parent=comp144933_c0_seq1.mrna1
Chr2	gffcl	locus	21277720	21278079	.	-	.	ID=RLOC_00015455;geneIDs=comp102537_c1_seq1.path1;transcripts=comp102537_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21277720	21278079	.	-	.	ID=comp102537_c1_seq1.mrna1;geneID=comp102537_c1_seq1.path1;Name=comp102537_c1_seq1;Dir=indeterminatecoverage=99.4;identity=99.4;matches=358;mismatches=0;indels=2;unknowns=0;Target=comp102537_c1_seq1 360 3 .;CDS_Target=comp102537_c1_seq1 81 4 .;locus=RLOC_00015455
Chr2	stalkie_big_nohaplotig	exon	21277720	21278079	99	-	.	Parent=comp102537_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	21278001	21278078	.	-	0	Parent=comp102537_c1_seq1.mrna1
Chr2	gffcl	locus	21278206	21278387	.	-	.	ID=RLOC_00015456;geneIDs=comp672422_c0_seq1.path1;transcripts=comp672422_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21278206	21278387	.	-	.	ID=comp672422_c0_seq1.mrna1;geneID=comp672422_c0_seq1.path1;Name=comp672422_c0_seq1;Dir=indeterminatecoverage=90.5;identity=100.0;matches=182;mismatches=0;indels=0;unknowns=0;Target=comp672422_c0_seq1 201 20 .;CDS_Target=comp672422_c0_seq1 192 88 .;locus=RLOC_00015456
Chr2	stalkie_big_nohaplotig	exon	21278206	21278387	100	-	.	Parent=comp672422_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	21278215	21278319	.	-	0	Parent=comp672422_c0_seq1.mrna1
Chr2	gffcl	locus	21282597	21384341	.	-	.	ID=RLOC_00015457;geneIDs=FBgn0033652.path1,comp163217_c1_seq1.path1;transcripts=comp163217_c1_seq1.mrna1,FBgn0033652.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21282597	21296464	.	-	.	ID=comp163217_c1_seq1.mrna1;geneID=comp163217_c1_seq1.path1;Name=comp163217_c1_seq1;Dir=indeterminatecoverage=56.6;identity=98.3;matches=2100;mismatches=18;indels=18;unknowns=0;Target=comp163217_c1_seq1 3785 1989 .;locus=RLOC_00015457
Chr2	stalkie_big_nohaplotig	exon	21282597	21284634	99	-	.	Parent=comp163217_c1_seq1.mrna1;Target=comp163217_c1_seq1 3786 1758 .
Chr2	stalkie_big_nohaplotig	exon	21284779	21284821	56	-	.	Parent=comp163217_c1_seq1.mrna1;Target=comp163217_c1_seq1 1757 1713 .
Chr2	stalkie_big_nohaplotig	exon	21286630	21286640	90	-	.	Parent=comp163217_c1_seq1.mrna1;Target=comp163217_c1_seq1 1689 1679 .
Chr2	stalkie_big_nohaplotig	exon	21291117	21291122	100	-	.	Parent=comp163217_c1_seq1.mrna1;Target=comp163217_c1_seq1 1678 1673 .
Chr2	stalkie_big_nohaplotig	exon	21291365	21291369	100	-	.	Parent=comp163217_c1_seq1.mrna1;Target=comp163217_c1_seq1 1672 1668 .
Chr2	stalkie_big_nohaplotig	exon	21292167	21292171	100	-	.	Parent=comp163217_c1_seq1.mrna1;Target=comp163217_c1_seq1 1667 1663 .
Chr2	stalkie_big_nohaplotig	exon	21292603	21292605	100	-	.	Parent=comp163217_c1_seq1.mrna1;Target=comp163217_c1_seq1 1662 1660 .
Chr2	stalkie_big_nohaplotig	exon	21293249	21293255	100	-	.	Parent=comp163217_c1_seq1.mrna1;Target=comp163217_c1_seq1 1659 1653 .
Chr2	stalkie_big_nohaplotig	exon	21296451	21296464	64	-	.	Parent=comp163217_c1_seq1.mrna1;Target=comp163217_c1_seq1 1652 1644 .
Chr2	stalkie_big_nohaplotig	CDS	21282598	21284394	.	-	0	Parent=comp163217_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21284641	21384341	.	-	.	ID=FBgn0033652.mrna1;geneID=FBgn0033652.path1;Name=FBgn0033652;Dir=sensecoverage=100.0;identity=100.0;matches=744;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015457
Chr2	stalkie_big_nohaplotig	exon	21284641	21285108	100	-	.	Parent=FBgn0033652.mrna1;Target=FBgn0033652 277 744 +
Chr2	stalkie_big_nohaplotig	exon	21295337	21295455	100	-	.	Parent=FBgn0033652.mrna1;Target=FBgn0033652 158 276 +
Chr2	stalkie_big_nohaplotig	exon	21375670	21375793	100	-	.	Parent=FBgn0033652.mrna1;Target=FBgn0033652 34 157 +
Chr2	stalkie_big_nohaplotig	exon	21384309	21384341	100	-	.	Parent=FBgn0033652.mrna1;Target=FBgn0033652 1 33 +
Chr2	stalkie_big_nohaplotig	CDS	21284641	21285108	.	-	0	Parent=FBgn0033652.mrna1;Target=FBgn0033652 277 744 +
Chr2	stalkie_big_nohaplotig	CDS	21295337	21295455	.	-	2	Parent=FBgn0033652.mrna1;Target=FBgn0033652 158 276 +
Chr2	stalkie_big_nohaplotig	CDS	21375670	21375793	.	-	0	Parent=FBgn0033652.mrna1;Target=FBgn0033652 34 157 +
Chr2	stalkie_big_nohaplotig	CDS	21384309	21384341	.	-	0	Parent=FBgn0033652.mrna1;Target=FBgn0033652 1 33 +
Chr2	gffcl	locus	21304129	21305253	.	+	.	ID=RLOC_00015458;geneIDs=FBgn0040373.3.path2;transcripts=FBgn0040373.3.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	21304129	21305253	.	+	.	ID=FBgn0040373.3.mrna2;geneID=FBgn0040373.3.path2;Name=FBgn0040373.3;Dir=sensecoverage=99.5;identity=98.4;matches=1031;mismatches=17;indels=0;unknowns=0;locus=RLOC_00015458
Chr2	stalkie_big_nohaplotig	exon	21304129	21304376	98	+	.	Parent=FBgn0040373.3.mrna2;Target=FBgn0040373.3 6 253 +
Chr2	stalkie_big_nohaplotig	exon	21304454	21305253	98	+	.	Parent=FBgn0040373.3.mrna2;Target=FBgn0040373.3 254 1053 +
Chr2	stalkie_big_nohaplotig	CDS	21304130	21304376	.	+	0	Parent=FBgn0040373.3.mrna2;Target=FBgn0040373.3 7 253 +
Chr2	stalkie_big_nohaplotig	CDS	21304454	21305253	.	+	2	Parent=FBgn0040373.3.mrna2;Target=FBgn0040373.3 254 1053 +
Chr2	gffcl	locus	21306546	21307917	.	+	.	ID=RLOC_00015459;geneIDs=FBgn0040373.6.path1;transcripts=FBgn0040373.6.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21306546	21307917	.	+	.	ID=FBgn0040373.6.mrna1;geneID=FBgn0040373.6.path1;Name=FBgn0040373.6;Dir=sensecoverage=99.6;identity=100.0;matches=1070;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015459
Chr2	stalkie_big_nohaplotig	exon	21306546	21306812	100	+	.	Parent=FBgn0040373.6.mrna1;Target=FBgn0040373.6 5 271 +
Chr2	stalkie_big_nohaplotig	exon	21307115	21307917	100	+	.	Parent=FBgn0040373.6.mrna1;Target=FBgn0040373.6 272 1074 +
Chr2	stalkie_big_nohaplotig	CDS	21306548	21306812	.	+	0	Parent=FBgn0040373.6.mrna1;Target=FBgn0040373.6 7 271 +
Chr2	stalkie_big_nohaplotig	CDS	21307115	21307917	.	+	2	Parent=FBgn0040373.6.mrna1;Target=FBgn0040373.6 272 1074 +
Chr2	gffcl	locus	21534369	21535493	.	-	.	ID=RLOC_00015460;geneIDs=FBgn0040373.3.path1;transcripts=FBgn0040373.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21534369	21535493	.	-	.	ID=FBgn0040373.3.mrna1;geneID=FBgn0040373.3.path1;Name=FBgn0040373.3;Dir=sensecoverage=99.5;identity=98.5;matches=1032;mismatches=16;indels=0;unknowns=0;locus=RLOC_00015460
Chr2	stalkie_big_nohaplotig	exon	21534369	21535168	98	-	.	Parent=FBgn0040373.3.mrna1;Target=FBgn0040373.3 254 1053 +
Chr2	stalkie_big_nohaplotig	exon	21535246	21535493	98	-	.	Parent=FBgn0040373.3.mrna1;Target=FBgn0040373.3 6 253 +
Chr2	stalkie_big_nohaplotig	CDS	21534369	21535168	.	-	2	Parent=FBgn0040373.3.mrna1;Target=FBgn0040373.3 254 1053 +
Chr2	stalkie_big_nohaplotig	CDS	21535246	21535492	.	-	0	Parent=FBgn0040373.3.mrna1;Target=FBgn0040373.3 7 253 +
Chr2	gffcl	locus	21576633	21583241	.	-	.	ID=RLOC_00015461;geneIDs=FBgn0033649.path1;transcripts=FBgn0033649.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21576633	21583241	.	-	.	ID=FBgn0033649.mrna1;geneID=FBgn0033649.path1;Name=FBgn0033649;Dir=sensecoverage=100.0;identity=99.4;matches=337;mismatches=1;indels=1;unknowns=0;locus=RLOC_00015461
Chr2	stalkie_big_nohaplotig	exon	21576633	21576740	99	-	.	Parent=FBgn0033649.mrna1;Target=FBgn0033649 232 339 +
Chr2	stalkie_big_nohaplotig	exon	21577668	21577780	100	-	.	Parent=FBgn0033649.mrna1;Target=FBgn0033649 119 231 +
Chr2	stalkie_big_nohaplotig	exon	21583125	21583241	99	-	.	Parent=FBgn0033649.mrna1;Target=FBgn0033649 1 118 +
Chr2	stalkie_big_nohaplotig	CDS	21576634	21576740	.	-	0	Parent=FBgn0033649.mrna1;Target=FBgn0033649 232 338 +
Chr2	stalkie_big_nohaplotig	CDS	21577668	21577780	.	-	2	Parent=FBgn0033649.mrna1;Target=FBgn0033649 119 231 +
Chr2	stalkie_big_nohaplotig	CDS	21583125	21583239	.	-	0	Parent=FBgn0033649.mrna1;Target=FBgn0033649 3 118 +
Chr2	gffcl	locus	21618024	21618555	.	+	.	ID=RLOC_00015462;geneIDs=comp93859_c0_seq1.path1;transcripts=comp93859_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21618024	21618555	.	+	.	ID=comp93859_c0_seq1.mrna1;geneID=comp93859_c0_seq1.path1;Name=comp93859_c0_seq1;Dir=indeterminatecoverage=97.8;identity=99.4;matches=529;mismatches=3;indels=0;unknowns=0;Target=comp93859_c0_seq1 532 1 .;CDS_Target=comp93859_c0_seq1 526 437 .;locus=RLOC_00015462
Chr2	stalkie_big_nohaplotig	exon	21618024	21618555	99	+	.	Parent=comp93859_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	21618460	21618549	.	+	0	Parent=comp93859_c0_seq1.mrna1
Chr2	gffcl	locus	21663308	21675504	.	-	.	ID=RLOC_00015463;geneIDs=FBgn0062449.1.path1;transcripts=FBgn0062449.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21663308	21675504	.	-	.	ID=FBgn0062449.1.mrna1;geneID=FBgn0062449.1.path1;Name=FBgn0062449.1;Dir=sensecoverage=100.0;identity=100.0;matches=918;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015463
Chr2	stalkie_big_nohaplotig	exon	21663308	21663711	100	-	.	Parent=FBgn0062449.1.mrna1;Target=FBgn0062449.1 515 918 +
Chr2	stalkie_big_nohaplotig	exon	21663769	21663876	100	-	.	Parent=FBgn0062449.1.mrna1;Target=FBgn0062449.1 407 514 +
Chr2	stalkie_big_nohaplotig	exon	21670392	21670438	100	-	.	Parent=FBgn0062449.1.mrna1;Target=FBgn0062449.1 360 406 +
Chr2	stalkie_big_nohaplotig	exon	21670494	21670573	100	-	.	Parent=FBgn0062449.1.mrna1;Target=FBgn0062449.1 280 359 +
Chr2	stalkie_big_nohaplotig	exon	21670632	21670754	100	-	.	Parent=FBgn0062449.1.mrna1;Target=FBgn0062449.1 157 279 +
Chr2	stalkie_big_nohaplotig	exon	21675287	21675362	100	-	.	Parent=FBgn0062449.1.mrna1;Target=FBgn0062449.1 81 156 +
Chr2	stalkie_big_nohaplotig	exon	21675425	21675504	100	-	.	Parent=FBgn0062449.1.mrna1;Target=FBgn0062449.1 1 80 +
Chr2	stalkie_big_nohaplotig	CDS	21663308	21663711	.	-	2	Parent=FBgn0062449.1.mrna1;Target=FBgn0062449.1 515 918 +
Chr2	stalkie_big_nohaplotig	CDS	21663769	21663876	.	-	2	Parent=FBgn0062449.1.mrna1;Target=FBgn0062449.1 407 514 +
Chr2	stalkie_big_nohaplotig	CDS	21670392	21670438	.	-	1	Parent=FBgn0062449.1.mrna1;Target=FBgn0062449.1 360 406 +
Chr2	stalkie_big_nohaplotig	CDS	21670494	21670573	.	-	0	Parent=FBgn0062449.1.mrna1;Target=FBgn0062449.1 280 359 +
Chr2	stalkie_big_nohaplotig	CDS	21670632	21670754	.	-	0	Parent=FBgn0062449.1.mrna1;Target=FBgn0062449.1 157 279 +
Chr2	stalkie_big_nohaplotig	CDS	21675287	21675362	.	-	1	Parent=FBgn0062449.1.mrna1;Target=FBgn0062449.1 81 156 +
Chr2	stalkie_big_nohaplotig	CDS	21675425	21675504	.	-	0	Parent=FBgn0062449.1.mrna1;Target=FBgn0062449.1 1 80 +
Chr2	gffcl	locus	21676909	21678071	.	+	.	ID=RLOC_00015464;geneIDs=FBgn0010516.1.path1;transcripts=FBgn0010516.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21676909	21678071	.	+	.	ID=FBgn0010516.1.mrna1;geneID=FBgn0010516.1.path1;Name=FBgn0010516.1;Dir=sensecoverage=100.0;identity=100.0;matches=1023;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015464
Chr2	stalkie_big_nohaplotig	exon	21676909	21676983	100	+	.	Parent=FBgn0010516.1.mrna1;Target=FBgn0010516.1 1 75 +
Chr2	stalkie_big_nohaplotig	exon	21677055	21677195	100	+	.	Parent=FBgn0010516.1.mrna1;Target=FBgn0010516.1 76 216 +
Chr2	stalkie_big_nohaplotig	exon	21677265	21678071	100	+	.	Parent=FBgn0010516.1.mrna1;Target=FBgn0010516.1 217 1023 +
Chr2	stalkie_big_nohaplotig	CDS	21676909	21676983	.	+	0	Parent=FBgn0010516.1.mrna1;Target=FBgn0010516.1 1 75 +
Chr2	stalkie_big_nohaplotig	CDS	21677055	21677195	.	+	0	Parent=FBgn0010516.1.mrna1;Target=FBgn0010516.1 76 216 +
Chr2	stalkie_big_nohaplotig	CDS	21677265	21678071	.	+	0	Parent=FBgn0010516.1.mrna1;Target=FBgn0010516.1 217 1023 +
Chr2	gffcl	locus	21681732	21682732	.	+	.	ID=RLOC_00015465;geneIDs=FBgn0040373.2.path1;transcripts=FBgn0040373.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21681732	21682732	.	+	.	ID=FBgn0040373.2.mrna1;geneID=FBgn0040373.2.path1;Name=FBgn0040373.2;Dir=sensecoverage=100.0;identity=99.9;matches=947;mismatches=0;indels=1;unknowns=0;locus=RLOC_00015465
Chr2	stalkie_big_nohaplotig	exon	21681732	21681851	99	+	.	Parent=FBgn0040373.2.mrna1;Target=FBgn0040373.2 1 121 +
Chr2	stalkie_big_nohaplotig	exon	21681906	21682732	100	+	.	Parent=FBgn0040373.2.mrna1;Target=FBgn0040373.2 122 948 +
Chr2	stalkie_big_nohaplotig	CDS	21681734	21681851	.	+	0	Parent=FBgn0040373.2.mrna1;Target=FBgn0040373.2 3 121 +
Chr2	stalkie_big_nohaplotig	CDS	21681906	21681936	.	+	2	Parent=FBgn0040373.2.mrna1;Target=FBgn0040373.2 122 152 +
Chr2	gffcl	locus	21688387	21688906	.	-	.	ID=RLOC_00015466;geneIDs=comp153716_c0_seq1.path1;transcripts=comp153716_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21688387	21688906	.	-	.	ID=comp153716_c0_seq1.mrna1;geneID=comp153716_c0_seq1.path1;Name=comp153716_c0_seq1;Dir=sensecoverage=66.0;identity=99.0;matches=412;mismatches=4;indels=0;unknowns=0;Target=comp153716_c0_seq1 229 336 +;locus=RLOC_00015466
Chr2	stalkie_big_nohaplotig	exon	21688387	21688448	95	-	.	Parent=comp153716_c0_seq1.mrna1;Target=comp153716_c0_seq1 355 416 +
Chr2	stalkie_big_nohaplotig	exon	21688553	21688906	99	-	.	Parent=comp153716_c0_seq1.mrna1;Target=comp153716_c0_seq1 1 354 +
Chr2	stalkie_big_nohaplotig	CDS	21688571	21688678	.	-	0	Parent=comp153716_c0_seq1.mrna1
Chr2	gffcl	locus	21690014	21692451	.	+	.	ID=RLOC_00015467;geneIDs=FBgn0040373.1.path1;transcripts=FBgn0040373.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21690014	21692451	.	+	.	ID=FBgn0040373.1.mrna1;geneID=FBgn0040373.1.path1;Name=FBgn0040373.1;Dir=sensecoverage=100.0;identity=99.8;matches=1189;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015467
Chr2	stalkie_big_nohaplotig	exon	21690014	21690362	99	+	.	Parent=FBgn0040373.1.mrna1;Target=FBgn0040373.1 1 349 +
Chr2	stalkie_big_nohaplotig	exon	21691610	21692451	99	+	.	Parent=FBgn0040373.1.mrna1;Target=FBgn0040373.1 350 1191 +
Chr2	stalkie_big_nohaplotig	CDS	21690014	21690362	.	+	0	Parent=FBgn0040373.1.mrna1;Target=FBgn0040373.1 1 349 +
Chr2	stalkie_big_nohaplotig	CDS	21691610	21692451	.	+	2	Parent=FBgn0040373.1.mrna1;Target=FBgn0040373.1 350 1191 +
Chr2	gffcl	locus	21697447	21698646	.	-	.	ID=RLOC_00015469;geneIDs=FBgn0015618.1.path1;transcripts=FBgn0015618.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21697447	21698646	.	-	.	ID=FBgn0015618.1.mrna1;geneID=FBgn0015618.1.path1;Name=FBgn0015618.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1200;mismatches=0;indels=0;unknowns=0;Target=FBgn0015618.1 1200 1 .;locus=RLOC_00015469
Chr2	stalkie_big_nohaplotig	exon	21697447	21698646	100	-	.	Parent=FBgn0015618.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	21697447	21698646	.	-	0	Parent=FBgn0015618.1.mrna1
Chr2	gffcl	locus	21700162	21701185	.	+	.	ID=RLOC_00015470;geneIDs=comp113300_c0_seq1.path1;transcripts=comp113300_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21700162	21701185	.	+	.	ID=comp113300_c0_seq1.mrna1;geneID=comp113300_c0_seq1.path1;Name=comp113300_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=964;mismatches=0;indels=0;unknowns=0;Target=comp113300_c0_seq1 407 580 +;locus=RLOC_00015470
Chr2	stalkie_big_nohaplotig	exon	21700162	21700199	100	+	.	Parent=comp113300_c0_seq1.mrna1;Target=comp113300_c0_seq1 1 38 +
Chr2	stalkie_big_nohaplotig	exon	21700260	21701185	100	+	.	Parent=comp113300_c0_seq1.mrna1;Target=comp113300_c0_seq1 39 964 +
Chr2	stalkie_big_nohaplotig	CDS	21700628	21700801	.	+	0	Parent=comp113300_c0_seq1.mrna1
Chr2	gffcl	locus	21702757	21704862	.	+	.	ID=RLOC_00015471;geneIDs=FBgn0033079.2.path1;transcripts=FBgn0033079.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21702757	21704862	.	+	.	ID=FBgn0033079.2.mrna1;geneID=FBgn0033079.2.path1;Name=FBgn0033079.2;Dir=sensecoverage=100.0;identity=100.0;matches=1281;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015471
Chr2	stalkie_big_nohaplotig	exon	21702757	21702971	100	+	.	Parent=FBgn0033079.2.mrna1;Target=FBgn0033079.2 1 215 +
Chr2	stalkie_big_nohaplotig	exon	21703038	21703227	100	+	.	Parent=FBgn0033079.2.mrna1;Target=FBgn0033079.2 216 405 +
Chr2	stalkie_big_nohaplotig	exon	21703831	21704002	100	+	.	Parent=FBgn0033079.2.mrna1;Target=FBgn0033079.2 406 577 +
Chr2	stalkie_big_nohaplotig	exon	21704076	21704611	100	+	.	Parent=FBgn0033079.2.mrna1;Target=FBgn0033079.2 578 1113 +
Chr2	stalkie_big_nohaplotig	exon	21704695	21704862	100	+	.	Parent=FBgn0033079.2.mrna1;Target=FBgn0033079.2 1114 1281 +
Chr2	stalkie_big_nohaplotig	CDS	21702757	21702971	.	+	0	Parent=FBgn0033079.2.mrna1;Target=FBgn0033079.2 1 215 +
Chr2	stalkie_big_nohaplotig	CDS	21703038	21703227	.	+	1	Parent=FBgn0033079.2.mrna1;Target=FBgn0033079.2 216 405 +
Chr2	stalkie_big_nohaplotig	CDS	21703831	21704002	.	+	0	Parent=FBgn0033079.2.mrna1;Target=FBgn0033079.2 406 577 +
Chr2	stalkie_big_nohaplotig	CDS	21704076	21704611	.	+	2	Parent=FBgn0033079.2.mrna1;Target=FBgn0033079.2 578 1113 +
Chr2	stalkie_big_nohaplotig	CDS	21704695	21704862	.	+	0	Parent=FBgn0033079.2.mrna1;Target=FBgn0033079.2 1114 1281 +
Chr2	gffcl	locus	21706866	21710234	.	.	.	ID=RLOC_00015472;geneIDs=FBgn0050031.4.path1,comp158880_c0_seq1.path1;transcripts=comp158880_c0_seq1.mrna1,FBgn0050031.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21706866	21710234	.	-	.	ID=comp158880_c0_seq1.mrna1;geneID=comp158880_c0_seq1.path1;Name=comp158880_c0_seq1;Dir=antisensecoverage=93.2;identity=93.4;matches=1196;mismatches=82;indels=3;unknowns=0;Target=comp158880_c0_seq1 109 237 .;locus=RLOC_00015472
Chr2	stalkie_big_nohaplotig	exon	21706866	21707440	85	-	.	Parent=comp158880_c0_seq1.mrna1;Target=comp158880_c0_seq1 95 672 -
Chr2	stalkie_big_nohaplotig	exon	21708831	21708839	100	-	.	Parent=comp158880_c0_seq1.mrna1;Target=comp158880_c0_seq1 673 681 -
Chr2	stalkie_big_nohaplotig	exon	21709481	21709854	100	-	.	Parent=comp158880_c0_seq1.mrna1;Target=comp158880_c0_seq1 682 1055 -
Chr2	stalkie_big_nohaplotig	exon	21709915	21710234	99	-	.	Parent=comp158880_c0_seq1.mrna1;Target=comp158880_c0_seq1 1056 1375 -
Chr2	stalkie_big_nohaplotig	CDS	21706880	21707008	.	-	0	Parent=comp158880_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21709281	21709874	.	+	.	ID=FBgn0050031.4.mrna1;geneID=FBgn0050031.4.path1;Name=FBgn0050031.4;Dir=indeterminatecoverage=100.0;identity=99.7;matches=592;mismatches=2;indels=0;unknowns=0;Target=FBgn0050031.4 594 1 .;locus=RLOC_00015472
Chr2	stalkie_big_nohaplotig	exon	21709281	21709874	99	+	.	Parent=FBgn0050031.4.mrna1
Chr2	stalkie_big_nohaplotig	CDS	21709281	21709874	.	+	0	Parent=FBgn0050031.4.mrna1
Chr2	gffcl	locus	21714840	21734811	.	-	.	ID=RLOC_00015473;geneIDs=FBgn0262736.2.path1,comp149892_c0_seq1.path1;transcripts=FBgn0262736.2.mrna1,comp149892_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21714840	21734811	.	-	.	ID=FBgn0262736.2.mrna1;geneID=FBgn0262736.2.path1;Name=FBgn0262736.2;Dir=sensecoverage=98.2;identity=100.0;matches=504;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015473
Chr2	stalkie_big_nohaplotig	exon	21714840	21715041	100	-	.	Parent=FBgn0262736.2.mrna1;Target=FBgn0262736.2 312 513 +
Chr2	stalkie_big_nohaplotig	exon	21717043	21717232	100	-	.	Parent=FBgn0262736.2.mrna1;Target=FBgn0262736.2 122 311 +
Chr2	stalkie_big_nohaplotig	exon	21734700	21734811	100	-	.	Parent=FBgn0262736.2.mrna1;Target=FBgn0262736.2 10 121 +
Chr2	stalkie_big_nohaplotig	CDS	21714840	21715041	.	-	1	Parent=FBgn0262736.2.mrna1;Target=FBgn0262736.2 312 513 +
Chr2	stalkie_big_nohaplotig	CDS	21717043	21717232	.	-	2	Parent=FBgn0262736.2.mrna1;Target=FBgn0262736.2 122 311 +
Chr2	stalkie_big_nohaplotig	CDS	21734700	21734811	.	-	0	Parent=FBgn0262736.2.mrna1;Target=FBgn0262736.2 10 121 +
Chr2	stalkie_big_nohaplotig	mRNA	21715019	21715898	.	-	.	ID=comp149892_c0_seq1.mrna1;geneID=comp149892_c0_seq1.path1;Name=comp149892_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=878;mismatches=2;indels=1;unknowns=0;Target=comp149892_c0_seq1 881 1 .;CDS_Target=comp149892_c0_seq1 360 268 .;locus=RLOC_00015473
Chr2	stalkie_big_nohaplotig	exon	21715019	21715898	99	-	.	Parent=comp149892_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	21715539	21715631	.	-	0	Parent=comp149892_c0_seq1.mrna1
Chr2	gffcl	locus	21737221	21738301	.	+	.	ID=RLOC_00015474;geneIDs=comp146965_c0_seq1.path1;transcripts=comp146965_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21737221	21738301	.	+	.	ID=comp146965_c0_seq1.mrna1;geneID=comp146965_c0_seq1.path1;Name=comp146965_c0_seq1;Dir=sensecoverage=99.9;identity=99.9;matches=915;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015474
Chr2	stalkie_big_nohaplotig	exon	21737221	21737415	100	+	.	Parent=comp146965_c0_seq1.mrna1;Target=comp146965_c0_seq1 1 195 +
Chr2	stalkie_big_nohaplotig	exon	21737476	21737668	100	+	.	Parent=comp146965_c0_seq1.mrna1;Target=comp146965_c0_seq1 196 388 +
Chr2	stalkie_big_nohaplotig	exon	21737719	21737852	99	+	.	Parent=comp146965_c0_seq1.mrna1;Target=comp146965_c0_seq1 389 522 +
Chr2	stalkie_big_nohaplotig	exon	21737908	21738301	100	+	.	Parent=comp146965_c0_seq1.mrna1;Target=comp146965_c0_seq1 523 916 +
Chr2	stalkie_big_nohaplotig	CDS	21737352	21737415	.	+	0	Parent=comp146965_c0_seq1.mrna1;Target=comp146965_c0_seq1 132 195 +
Chr2	stalkie_big_nohaplotig	CDS	21737476	21737668	.	+	2	Parent=comp146965_c0_seq1.mrna1;Target=comp146965_c0_seq1 196 388 +
Chr2	stalkie_big_nohaplotig	CDS	21737719	21737852	.	+	1	Parent=comp146965_c0_seq1.mrna1;Target=comp146965_c0_seq1 389 522 +
Chr2	stalkie_big_nohaplotig	CDS	21737908	21738173	.	+	2	Parent=comp146965_c0_seq1.mrna1;Target=comp146965_c0_seq1 523 788 +
Chr2	gffcl	locus	21738998	21743517	.	-	.	ID=RLOC_00015475;geneIDs=FBgn0026761.1.path1;transcripts=FBgn0026761.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21738998	21743517	.	-	.	ID=FBgn0026761.1.mrna1;geneID=FBgn0026761.1.path1;Name=FBgn0026761.1;Dir=sensecoverage=100.0;identity=100.0;matches=2139;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015475
Chr2	stalkie_big_nohaplotig	exon	21738998	21739169	100	-	.	Parent=FBgn0026761.1.mrna1;Target=FBgn0026761.1 1968 2139 +
Chr2	stalkie_big_nohaplotig	exon	21739244	21739936	100	-	.	Parent=FBgn0026761.1.mrna1;Target=FBgn0026761.1 1275 1967 +
Chr2	stalkie_big_nohaplotig	exon	21740994	21741063	100	-	.	Parent=FBgn0026761.1.mrna1;Target=FBgn0026761.1 1205 1274 +
Chr2	stalkie_big_nohaplotig	exon	21741131	21741299	100	-	.	Parent=FBgn0026761.1.mrna1;Target=FBgn0026761.1 1036 1204 +
Chr2	stalkie_big_nohaplotig	exon	21741374	21741555	100	-	.	Parent=FBgn0026761.1.mrna1;Target=FBgn0026761.1 854 1035 +
Chr2	stalkie_big_nohaplotig	exon	21742510	21742861	100	-	.	Parent=FBgn0026761.1.mrna1;Target=FBgn0026761.1 502 853 +
Chr2	stalkie_big_nohaplotig	exon	21742928	21743277	100	-	.	Parent=FBgn0026761.1.mrna1;Target=FBgn0026761.1 152 501 +
Chr2	stalkie_big_nohaplotig	exon	21743367	21743517	100	-	.	Parent=FBgn0026761.1.mrna1;Target=FBgn0026761.1 1 151 +
Chr2	stalkie_big_nohaplotig	CDS	21738998	21739169	.	-	1	Parent=FBgn0026761.1.mrna1;Target=FBgn0026761.1 1968 2139 +
Chr2	stalkie_big_nohaplotig	CDS	21739244	21739936	.	-	1	Parent=FBgn0026761.1.mrna1;Target=FBgn0026761.1 1275 1967 +
Chr2	stalkie_big_nohaplotig	CDS	21740994	21741063	.	-	2	Parent=FBgn0026761.1.mrna1;Target=FBgn0026761.1 1205 1274 +
Chr2	stalkie_big_nohaplotig	CDS	21741131	21741299	.	-	0	Parent=FBgn0026761.1.mrna1;Target=FBgn0026761.1 1036 1204 +
Chr2	stalkie_big_nohaplotig	CDS	21741374	21741555	.	-	2	Parent=FBgn0026761.1.mrna1;Target=FBgn0026761.1 854 1035 +
Chr2	stalkie_big_nohaplotig	CDS	21742510	21742861	.	-	0	Parent=FBgn0026761.1.mrna1;Target=FBgn0026761.1 502 853 +
Chr2	stalkie_big_nohaplotig	CDS	21742928	21743277	.	-	2	Parent=FBgn0026761.1.mrna1;Target=FBgn0026761.1 152 501 +
Chr2	stalkie_big_nohaplotig	CDS	21743367	21743517	.	-	0	Parent=FBgn0026761.1.mrna1;Target=FBgn0026761.1 1 151 +
Chr2	gffcl	locus	21750706	21758456	.	+	.	ID=RLOC_00015476;geneIDs=comp78367_c0_seq1.path1;transcripts=comp78367_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21750706	21758456	.	+	.	ID=comp78367_c0_seq1.mrna1;geneID=comp78367_c0_seq1.path1;Name=comp78367_c0_seq1;Dir=indeterminatecoverage=86.8;identity=100.0;matches=560;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015476
Chr2	stalkie_big_nohaplotig	exon	21750706	21750711	100	+	.	Parent=comp78367_c0_seq1.mrna1;Target=comp78367_c0_seq1 40 35 .
Chr2	stalkie_big_nohaplotig	exon	21757903	21758456	100	+	.	Parent=comp78367_c0_seq1.mrna1;Target=comp78367_c0_seq1 594 41 .
Chr2	stalkie_big_nohaplotig	CDS	21750706	21750711	.	+	0	Parent=comp78367_c0_seq1.mrna1;Target=comp78367_c0_seq1 40 35 .
Chr2	stalkie_big_nohaplotig	CDS	21757903	21757977	.	+	0	Parent=comp78367_c0_seq1.mrna1;Target=comp78367_c0_seq1 115 41 .
Chr2	gffcl	locus	21759032	21765325	.	-	.	ID=RLOC_00015477;geneIDs=FBgn0086655.1.path1;transcripts=FBgn0086655.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	21759032	21765325	.	-	.	ID=FBgn0086655.1.mrna1;geneID=FBgn0086655.1.path1;Name=FBgn0086655.1;Dir=sensecoverage=100.0;identity=99.4;matches=4830;mismatches=21;indels=9;unknowns=0;locus=RLOC_00015477
Chr2	stalkie_big_nohaplotig	exon	21759032	21759284	96	-	.	Parent=FBgn0086655.1.mrna1;Target=FBgn0086655.1 4599 4857 +
Chr2	stalkie_big_nohaplotig	exon	21759348	21759525	100	-	.	Parent=FBgn0086655.1.mrna1;Target=FBgn0086655.1 4421 4598 +
Chr2	stalkie_big_nohaplotig	exon	21760663	21760807	99	-	.	Parent=FBgn0086655.1.mrna1;Target=FBgn0086655.1 4276 4420 +
Chr2	stalkie_big_nohaplotig	exon	21760886	21761540	99	-	.	Parent=FBgn0086655.1.mrna1;Target=FBgn0086655.1 3621 4275 +
Chr2	stalkie_big_nohaplotig	exon	21761633	21763251	99	-	.	Parent=FBgn0086655.1.mrna1;Target=FBgn0086655.1 2002 3620 +
Chr2	stalkie_big_nohaplotig	exon	21763322	21765325	99	-	.	Parent=FBgn0086655.1.mrna1;Target=FBgn0086655.1 1 2001 +
Chr2	stalkie_big_nohaplotig	CDS	21759032	21759284	.	-	1	Parent=FBgn0086655.1.mrna1;Target=FBgn0086655.1 4599 4857 +
Chr2	stalkie_big_nohaplotig	CDS	21759348	21759525	.	-	2	Parent=FBgn0086655.1.mrna1;Target=FBgn0086655.1 4421 4598 +
Chr2	stalkie_big_nohaplotig	CDS	21760663	21760807	.	-	0	Parent=FBgn0086655.1.mrna1;Target=FBgn0086655.1 4276 4420 +
Chr2	stalkie_big_nohaplotig	CDS	21760886	21761540	.	-	1	Parent=FBgn0086655.1.mrna1;Target=FBgn0086655.1 3621 4275 +
Chr2	stalkie_big_nohaplotig	CDS	21761633	21763251	.	-	0	Parent=FBgn0086655.1.mrna1;Target=FBgn0086655.1 2002 3620 +
Chr2	stalkie_big_nohaplotig	CDS	21763322	21765325	.	-	0	Parent=FBgn0086655.1.mrna1;Target=FBgn0086655.1 1 2001 +
Chr2	gffcl	locus	22065307	22072186	.	-	.	ID=RLOC_00015479;geneIDs=comp152153_c0_seq1.path1;transcripts=comp152153_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22065307	22072186	.	-	.	ID=comp152153_c0_seq1.mrna1;geneID=comp152153_c0_seq1.path1;Name=comp152153_c0_seq1;Dir=antisensecoverage=95.3;identity=99.6;matches=694;mismatches=3;indels=0;unknowns=0;Target=comp152153_c0_seq1 701 724 .;locus=RLOC_00015479
Chr2	stalkie_big_nohaplotig	exon	22065307	22065540	99	-	.	Parent=comp152153_c0_seq1.mrna1;Target=comp152153_c0_seq1 30 263 -
Chr2	stalkie_big_nohaplotig	exon	22071724	22072186	99	-	.	Parent=comp152153_c0_seq1.mrna1;Target=comp152153_c0_seq1 264 726 -
Chr2	stalkie_big_nohaplotig	CDS	22072161	22072184	.	-	0	Parent=comp152153_c0_seq1.mrna1
Chr2	gffcl	locus	22075072	22076888	.	+	.	ID=RLOC_00015480;geneIDs=ORF483.path1;transcripts=ORF483.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22075072	22076888	.	+	.	ID=ORF483.mrna1;geneID=ORF483.path1;Name=ORF483;Dir=sensecoverage=100.0;identity=99.1;matches=1737;mismatches=15;indels=0;unknowns=0;locus=RLOC_00015480
Chr2	stalkie_big_nohaplotig	exon	22075072	22075182	100	+	.	Parent=ORF483.mrna1;Target=ORF483 1 111 +
Chr2	stalkie_big_nohaplotig	exon	22075248	22076888	99	+	.	Parent=ORF483.mrna1;Target=ORF483 112 1752 +
Chr2	stalkie_big_nohaplotig	CDS	22075072	22075182	.	+	0	Parent=ORF483.mrna1;Target=ORF483 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	22075248	22076888	.	+	0	Parent=ORF483.mrna1;Target=ORF483 112 1752 +
Chr2	gffcl	locus	22078001	22080151	.	+	.	ID=RLOC_00015481;geneIDs=ORF468.path1;transcripts=ORF468.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22078001	22080151	.	+	.	ID=ORF468.mrna1;geneID=ORF468.path1;Name=ORF468;Dir=sensecoverage=100.0;identity=99.4;matches=1759;mismatches=11;indels=0;unknowns=0;locus=RLOC_00015481
Chr2	stalkie_big_nohaplotig	exon	22078001	22078150	100	+	.	Parent=ORF468.mrna1;Target=ORF468 1 150 +
Chr2	stalkie_big_nohaplotig	exon	22078532	22080151	99	+	.	Parent=ORF468.mrna1;Target=ORF468 151 1770 +
Chr2	stalkie_big_nohaplotig	CDS	22078001	22078150	.	+	0	Parent=ORF468.mrna1;Target=ORF468 1 150 +
Chr2	stalkie_big_nohaplotig	CDS	22078532	22080151	.	+	0	Parent=ORF468.mrna1;Target=ORF468 151 1770 +
Chr2	gffcl	locus	22115117	22116790	.	+	.	ID=RLOC_00015482;geneIDs=ORF657.path1;transcripts=ORF657.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22115117	22116790	.	+	.	ID=ORF657.mrna1;geneID=ORF657.path1;Name=ORF657;Dir=sensecoverage=100.0;identity=97.4;matches=1516;mismatches=32;indels=9;unknowns=0;locus=RLOC_00015482
Chr2	stalkie_big_nohaplotig	exon	22115117	22115170	96	+	.	Parent=ORF657.mrna1;Target=ORF657 1 54 +
Chr2	stalkie_big_nohaplotig	exon	22115232	22116187	98	+	.	Parent=ORF657.mrna1;Target=ORF657 55 1010 +
Chr2	stalkie_big_nohaplotig	exon	22116253	22116790	95	+	.	Parent=ORF657.mrna1;Target=ORF657 1011 1557 +
Chr2	stalkie_big_nohaplotig	CDS	22115117	22115170	.	+	0	Parent=ORF657.mrna1;Target=ORF657 1 54 +
Chr2	stalkie_big_nohaplotig	CDS	22115232	22116187	.	+	0	Parent=ORF657.mrna1;Target=ORF657 55 1010 +
Chr2	stalkie_big_nohaplotig	CDS	22116253	22116790	.	+	1	Parent=ORF657.mrna1;Target=ORF657 1011 1557 +
Chr2	gffcl	locus	22123467	22142509	.	-	.	ID=RLOC_00015483;geneIDs=FBgn0033075.1.path1;transcripts=FBgn0033075.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22123467	22142509	.	-	.	ID=FBgn0033075.1.mrna1;geneID=FBgn0033075.1.path1;Name=FBgn0033075.1;Dir=sensecoverage=100.0;identity=99.9;matches=3887;mismatches=4;indels=0;unknowns=0;locus=RLOC_00015483
Chr2	stalkie_big_nohaplotig	exon	22123467	22123565	100	-	.	Parent=FBgn0033075.1.mrna1;Target=FBgn0033075.1 3793 3891 +
Chr2	stalkie_big_nohaplotig	exon	22123631	22123872	100	-	.	Parent=FBgn0033075.1.mrna1;Target=FBgn0033075.1 3551 3792 +
Chr2	stalkie_big_nohaplotig	exon	22123932	22124269	100	-	.	Parent=FBgn0033075.1.mrna1;Target=FBgn0033075.1 3213 3550 +
Chr2	stalkie_big_nohaplotig	exon	22124334	22124459	100	-	.	Parent=FBgn0033075.1.mrna1;Target=FBgn0033075.1 3087 3212 +
Chr2	stalkie_big_nohaplotig	exon	22124527	22125734	99	-	.	Parent=FBgn0033075.1.mrna1;Target=FBgn0033075.1 1879 3086 +
Chr2	stalkie_big_nohaplotig	exon	22125793	22125903	100	-	.	Parent=FBgn0033075.1.mrna1;Target=FBgn0033075.1 1768 1878 +
Chr2	stalkie_big_nohaplotig	exon	22125970	22126378	99	-	.	Parent=FBgn0033075.1.mrna1;Target=FBgn0033075.1 1359 1767 +
Chr2	stalkie_big_nohaplotig	exon	22126445	22126704	100	-	.	Parent=FBgn0033075.1.mrna1;Target=FBgn0033075.1 1099 1358 +
Chr2	stalkie_big_nohaplotig	exon	22127894	22128350	100	-	.	Parent=FBgn0033075.1.mrna1;Target=FBgn0033075.1 642 1098 +
Chr2	stalkie_big_nohaplotig	exon	22128425	22128932	99	-	.	Parent=FBgn0033075.1.mrna1;Target=FBgn0033075.1 134 641 +
Chr2	stalkie_big_nohaplotig	exon	22142377	22142509	100	-	.	Parent=FBgn0033075.1.mrna1;Target=FBgn0033075.1 1 133 +
Chr2	stalkie_big_nohaplotig	CDS	22123467	22123565	.	-	0	Parent=FBgn0033075.1.mrna1;Target=FBgn0033075.1 3793 3891 +
Chr2	stalkie_big_nohaplotig	CDS	22123631	22123872	.	-	2	Parent=FBgn0033075.1.mrna1;Target=FBgn0033075.1 3551 3792 +
Chr2	stalkie_big_nohaplotig	CDS	22123932	22124269	.	-	1	Parent=FBgn0033075.1.mrna1;Target=FBgn0033075.1 3213 3550 +
Chr2	stalkie_big_nohaplotig	CDS	22124334	22124459	.	-	1	Parent=FBgn0033075.1.mrna1;Target=FBgn0033075.1 3087 3212 +
Chr2	stalkie_big_nohaplotig	CDS	22124527	22125734	.	-	0	Parent=FBgn0033075.1.mrna1;Target=FBgn0033075.1 1879 3086 +
Chr2	stalkie_big_nohaplotig	CDS	22125793	22125903	.	-	0	Parent=FBgn0033075.1.mrna1;Target=FBgn0033075.1 1768 1878 +
Chr2	stalkie_big_nohaplotig	CDS	22125970	22126378	.	-	1	Parent=FBgn0033075.1.mrna1;Target=FBgn0033075.1 1359 1767 +
Chr2	stalkie_big_nohaplotig	CDS	22126445	22126704	.	-	0	Parent=FBgn0033075.1.mrna1;Target=FBgn0033075.1 1099 1358 +
Chr2	stalkie_big_nohaplotig	CDS	22127894	22128350	.	-	1	Parent=FBgn0033075.1.mrna1;Target=FBgn0033075.1 642 1098 +
Chr2	stalkie_big_nohaplotig	CDS	22128425	22128932	.	-	2	Parent=FBgn0033075.1.mrna1;Target=FBgn0033075.1 134 641 +
Chr2	stalkie_big_nohaplotig	CDS	22142377	22142509	.	-	0	Parent=FBgn0033075.1.mrna1;Target=FBgn0033075.1 1 133 +
Chr2	gffcl	locus	22142936	22145039	.	+	.	ID=RLOC_00015484;geneIDs=comp158010_c1_seq1.path1;transcripts=comp158010_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22142936	22145039	.	+	.	ID=comp158010_c1_seq1.mrna1;geneID=comp158010_c1_seq1.path1;Name=comp158010_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=2070;mismatches=29;indels=21;unknowns=0;Target=comp158010_c1_seq1 2115 1 .;CDS_Target=comp158010_c1_seq1 138 1 .;locus=RLOC_00015484
Chr2	stalkie_big_nohaplotig	exon	22142936	22145039	97	+	.	Parent=comp158010_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	22142936	22143073	.	+	0	Parent=comp158010_c1_seq1.mrna1
Chr2	gffcl	locus	22170555	22980281	.	-	.	ID=RLOC_00015485;geneIDs=comp135104_c0_seq1.path1,comp158435_c7_seq1.path2;transcripts=comp158435_c7_seq1.mrna2,comp135104_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22170555	22980281	.	-	.	ID=comp158435_c7_seq1.mrna2;geneID=comp158435_c7_seq1.path2;Name=comp158435_c7_seq1;Dir=indeterminatecoverage=7.3;identity=99.5;matches=364;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015485
Chr2	stalkie_big_nohaplotig	exon	22170555	22170560	100	-	.	Parent=comp158435_c7_seq1.mrna2;Target=comp158435_c7_seq1 5149 5144 .
Chr2	stalkie_big_nohaplotig	exon	22178335	22178341	100	-	.	Parent=comp158435_c7_seq1.mrna2;Target=comp158435_c7_seq1 5143 5137 .
Chr2	stalkie_big_nohaplotig	exon	22186649	22186654	100	-	.	Parent=comp158435_c7_seq1.mrna2;Target=comp158435_c7_seq1 5136 5131 .
Chr2	stalkie_big_nohaplotig	exon	22189064	22189066	100	-	.	Parent=comp158435_c7_seq1.mrna2;Target=comp158435_c7_seq1 5130 5128 .
Chr2	stalkie_big_nohaplotig	exon	22191487	22191496	100	-	.	Parent=comp158435_c7_seq1.mrna2;Target=comp158435_c7_seq1 5127 5118 .
Chr2	stalkie_big_nohaplotig	exon	22196966	22196973	100	-	.	Parent=comp158435_c7_seq1.mrna2;Target=comp158435_c7_seq1 5098 5091 .
Chr2	stalkie_big_nohaplotig	exon	22200932	22200937	100	-	.	Parent=comp158435_c7_seq1.mrna2;Target=comp158435_c7_seq1 5090 5085 .
Chr2	stalkie_big_nohaplotig	exon	22204300	22204306	71	-	.	Parent=comp158435_c7_seq1.mrna2;Target=comp158435_c7_seq1 5084 5078 .
Chr2	stalkie_big_nohaplotig	exon	22205751	22205756	100	-	.	Parent=comp158435_c7_seq1.mrna2;Target=comp158435_c7_seq1 5077 5072 .
Chr2	stalkie_big_nohaplotig	exon	22213690	22213694	100	-	.	Parent=comp158435_c7_seq1.mrna2;Target=comp158435_c7_seq1 5071 5067 .
Chr2	stalkie_big_nohaplotig	exon	22217321	22217327	100	-	.	Parent=comp158435_c7_seq1.mrna2;Target=comp158435_c7_seq1 5066 5060 .
Chr2	stalkie_big_nohaplotig	exon	22225125	22225126	100	-	.	Parent=comp158435_c7_seq1.mrna2;Target=comp158435_c7_seq1 5059 5058 .
Chr2	stalkie_big_nohaplotig	exon	22230364	22230365	100	-	.	Parent=comp158435_c7_seq1.mrna2;Target=comp158435_c7_seq1 5057 5056 .
Chr2	stalkie_big_nohaplotig	exon	22232786	22232787	100	-	.	Parent=comp158435_c7_seq1.mrna2;Target=comp158435_c7_seq1 5055 5054 .
Chr2	stalkie_big_nohaplotig	exon	22979850	22979891	100	-	.	Parent=comp158435_c7_seq1.mrna2;Target=comp158435_c7_seq1 5053 5012 .
Chr2	stalkie_big_nohaplotig	exon	22980036	22980281	100	-	.	Parent=comp158435_c7_seq1.mrna2;Target=comp158435_c7_seq1 5011 4766 .
Chr2	stalkie_big_nohaplotig	mRNA	22979473	22979883	.	-	.	ID=comp135104_c0_seq1.mrna1;geneID=comp135104_c0_seq1.path1;Name=comp135104_c0_seq1;Dir=indeterminatecoverage=97.6;identity=99.8;matches=410;mismatches=1;indels=0;unknowns=0;Target=comp135104_c0_seq1 411 1 .;CDS_Target=comp135104_c0_seq1 154 2 .;locus=RLOC_00015485
Chr2	stalkie_big_nohaplotig	exon	22979473	22979883	99	-	.	Parent=comp135104_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	22979730	22979882	.	-	0	Parent=comp135104_c0_seq1.mrna1
Chr2	gffcl	locus	22176678	22273169	.	-	.	ID=RLOC_00015486;geneIDs=FBgn0263144.1.path2,comp163117_c6_seq1.path1;transcripts=comp163117_c6_seq1.mrna1,FBgn0263144.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	22176678	22180784	.	-	.	ID=comp163117_c6_seq1.mrna1;geneID=comp163117_c6_seq1.path1;Name=comp163117_c6_seq1;Dir=antisensecoverage=56.0;identity=99.4;matches=2489;mismatches=13;indels=1;unknowns=0;locus=RLOC_00015486
Chr2	stalkie_big_nohaplotig	exon	22176678	22177477	98	-	.	Parent=comp163117_c6_seq1.mrna1;Target=comp163117_c6_seq1 1 800 -
Chr2	stalkie_big_nohaplotig	exon	22177534	22177720	100	-	.	Parent=comp163117_c6_seq1.mrna1;Target=comp163117_c6_seq1 801 987 -
Chr2	stalkie_big_nohaplotig	exon	22179130	22180264	99	-	.	Parent=comp163117_c6_seq1.mrna1;Target=comp163117_c6_seq1 988 2123 -
Chr2	stalkie_big_nohaplotig	exon	22180405	22180784	99	-	.	Parent=comp163117_c6_seq1.mrna1;Target=comp163117_c6_seq1 2124 2503 -
Chr2	stalkie_big_nohaplotig	CDS	22179131	22180264	.	-	1	Parent=comp163117_c6_seq1.mrna1;Target=comp163117_c6_seq1 989 2123 .
Chr2	stalkie_big_nohaplotig	CDS	22180405	22180784	.	-	0	Parent=comp163117_c6_seq1.mrna1;Target=comp163117_c6_seq1 2124 2503 .
Chr2	stalkie_big_nohaplotig	mRNA	22179134	22273169	.	-	.	ID=FBgn0263144.1.mrna2;geneID=FBgn0263144.1.path2;Name=FBgn0263144.1;Dir=sensecoverage=68.7;identity=98.9;matches=1589;mismatches=14;indels=4;unknowns=0;locus=RLOC_00015486
Chr2	stalkie_big_nohaplotig	exon	22179134	22180264	99	-	.	Parent=FBgn0263144.1.mrna2;Target=FBgn0263144.1 1344 2474 +
Chr2	stalkie_big_nohaplotig	exon	22180405	22180784	99	-	.	Parent=FBgn0263144.1.mrna2;Target=FBgn0263144.1 964 1343 +
Chr2	stalkie_big_nohaplotig	exon	22182575	22182585	100	-	.	Parent=FBgn0263144.1.mrna2;Target=FBgn0263144.1 953 963 +
Chr2	stalkie_big_nohaplotig	exon	22190737	22190739	100	-	.	Parent=FBgn0263144.1.mrna2;Target=FBgn0263144.1 950 952 +
Chr2	stalkie_big_nohaplotig	exon	22198996	22199003	100	-	.	Parent=FBgn0263144.1.mrna2;Target=FBgn0263144.1 942 949 +
Chr2	stalkie_big_nohaplotig	exon	22210825	22210828	100	-	.	Parent=FBgn0263144.1.mrna2;Target=FBgn0263144.1 938 941 +
Chr2	stalkie_big_nohaplotig	exon	22216543	22216579	65	-	.	Parent=FBgn0263144.1.mrna2;Target=FBgn0263144.1 897 937 +
Chr2	stalkie_big_nohaplotig	exon	22223390	22223393	100	-	.	Parent=FBgn0263144.1.mrna2;Target=FBgn0263144.1 893 896 +
Chr2	stalkie_big_nohaplotig	exon	22232031	22232033	100	-	.	Parent=FBgn0263144.1.mrna2;Target=FBgn0263144.1 890 892 +
Chr2	stalkie_big_nohaplotig	exon	22241389	22241400	100	-	.	Parent=FBgn0263144.1.mrna2;Target=FBgn0263144.1 836 847 +
Chr2	stalkie_big_nohaplotig	exon	22273149	22273154	100	-	.	Parent=FBgn0263144.1.mrna2;Target=FBgn0263144.1 830 835 +
Chr2	stalkie_big_nohaplotig	exon	22273167	22273169	100	-	.	Parent=FBgn0263144.1.mrna2;Target=FBgn0263144.1 774 776 +
Chr2	stalkie_big_nohaplotig	CDS	22216563	22216579	.	-	0	Parent=FBgn0263144.1.mrna2;Target=FBgn0263144.1 897 913 +
Chr2	stalkie_big_nohaplotig	CDS	22223390	22223393	.	-	1	Parent=FBgn0263144.1.mrna2;Target=FBgn0263144.1 893 896 +
Chr2	stalkie_big_nohaplotig	CDS	22232031	22232033	.	-	1	Parent=FBgn0263144.1.mrna2;Target=FBgn0263144.1 890 892 +
Chr2	stalkie_big_nohaplotig	CDS	22241389	22241400	.	-	1	Parent=FBgn0263144.1.mrna2;Target=FBgn0263144.1 836 847 +
Chr2	stalkie_big_nohaplotig	CDS	22273149	22273154	.	-	1	Parent=FBgn0263144.1.mrna2;Target=FBgn0263144.1 830 835 +
Chr2	stalkie_big_nohaplotig	CDS	22273167	22273169	.	-	1	Parent=FBgn0263144.1.mrna2;Target=FBgn0263144.1 774 776 +
Chr2	gffcl	locus	22181887	22352492	.	-	.	ID=RLOC_00015487;geneIDs=comp153134_c0_seq1.path1;transcripts=comp153134_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22181887	22352492	.	-	.	ID=comp153134_c0_seq1.mrna1;geneID=comp153134_c0_seq1.path1;Name=comp153134_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=805;mismatches=1;indels=3;unknowns=0;Target=comp153134_c0_seq1 109 2 .;locus=RLOC_00015487
Chr2	stalkie_big_nohaplotig	exon	22181887	22182190	99	-	.	Parent=comp153134_c0_seq1.mrna1;Target=comp153134_c0_seq1 809 506 .
Chr2	stalkie_big_nohaplotig	exon	22245852	22245878	100	-	.	Parent=comp153134_c0_seq1.mrna1;Target=comp153134_c0_seq1 505 479 .
Chr2	stalkie_big_nohaplotig	exon	22262009	22262015	100	-	.	Parent=comp153134_c0_seq1.mrna1;Target=comp153134_c0_seq1 478 472 .
Chr2	stalkie_big_nohaplotig	exon	22263665	22263668	100	-	.	Parent=comp153134_c0_seq1.mrna1;Target=comp153134_c0_seq1 471 468 .
Chr2	stalkie_big_nohaplotig	exon	22268993	22269000	100	-	.	Parent=comp153134_c0_seq1.mrna1;Target=comp153134_c0_seq1 467 460 .
Chr2	stalkie_big_nohaplotig	exon	22304545	22304549	100	-	.	Parent=comp153134_c0_seq1.mrna1;Target=comp153134_c0_seq1 459 455 .
Chr2	stalkie_big_nohaplotig	exon	22319844	22319846	100	-	.	Parent=comp153134_c0_seq1.mrna1;Target=comp153134_c0_seq1 454 452 .
Chr2	stalkie_big_nohaplotig	exon	22352045	22352492	99	-	.	Parent=comp153134_c0_seq1.mrna1;Target=comp153134_c0_seq1 451 1 .
Chr2	stalkie_big_nohaplotig	CDS	22352384	22352491	.	-	0	Parent=comp153134_c0_seq1.mrna1
Chr2	gffcl	locus	22358392	22359116	.	-	.	ID=RLOC_00015490;geneIDs=FBgn0032189.1.path1;transcripts=FBgn0032189.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22358392	22359116	.	-	.	ID=FBgn0032189.1.mrna1;geneID=FBgn0032189.1.path1;Name=FBgn0032189.1;Dir=sensecoverage=100.0;identity=99.3;matches=602;mismatches=4;indels=0;unknowns=0;locus=RLOC_00015490
Chr2	stalkie_big_nohaplotig	exon	22358392	22358560	100	-	.	Parent=FBgn0032189.1.mrna1;Target=FBgn0032189.1 438 606 +
Chr2	stalkie_big_nohaplotig	exon	22358621	22358919	99	-	.	Parent=FBgn0032189.1.mrna1;Target=FBgn0032189.1 139 437 +
Chr2	stalkie_big_nohaplotig	exon	22358979	22359116	98	-	.	Parent=FBgn0032189.1.mrna1;Target=FBgn0032189.1 1 138 +
Chr2	stalkie_big_nohaplotig	CDS	22358392	22358560	.	-	1	Parent=FBgn0032189.1.mrna1;Target=FBgn0032189.1 438 606 +
Chr2	stalkie_big_nohaplotig	CDS	22358621	22358919	.	-	0	Parent=FBgn0032189.1.mrna1;Target=FBgn0032189.1 139 437 +
Chr2	stalkie_big_nohaplotig	CDS	22358979	22359116	.	-	0	Parent=FBgn0032189.1.mrna1;Target=FBgn0032189.1 1 138 +
Chr2	gffcl	locus	22364553	22366524	.	-	.	ID=RLOC_00015491;geneIDs=comp162896_c0_seq1.path1;transcripts=comp162896_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22364553	22366524	.	-	.	ID=comp162896_c0_seq1.mrna1;geneID=comp162896_c0_seq1.path1;Name=comp162896_c0_seq1;Dir=indeterminatecoverage=98.0;identity=96.6;matches=1937;mismatches=24;indels=44;unknowns=0;Target=comp162896_c0_seq1 1994 1 .;CDS_Target=comp162896_c0_seq1 304 188 .;locus=RLOC_00015491
Chr2	stalkie_big_nohaplotig	exon	22364553	22366524	96	-	.	Parent=comp162896_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	22366215	22366331	.	-	0	Parent=comp162896_c0_seq1.mrna1
Chr2	gffcl	locus	22369704	22376442	.	-	.	ID=RLOC_00015492;geneIDs=FBgn0021847.1.path1;transcripts=FBgn0021847.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22369704	22376442	.	-	.	ID=FBgn0021847.1.mrna1;geneID=FBgn0021847.1.path1;Name=FBgn0021847.1;Dir=sensecoverage=100.0;identity=99.8;matches=2567;mismatches=4;indels=0;unknowns=0;locus=RLOC_00015492
Chr2	stalkie_big_nohaplotig	exon	22369704	22369833	100	-	.	Parent=FBgn0021847.1.mrna1;Target=FBgn0021847.1 2442 2571 +
Chr2	stalkie_big_nohaplotig	exon	22369900	22370096	100	-	.	Parent=FBgn0021847.1.mrna1;Target=FBgn0021847.1 2245 2441 +
Chr2	stalkie_big_nohaplotig	exon	22370169	22370282	99	-	.	Parent=FBgn0021847.1.mrna1;Target=FBgn0021847.1 2131 2244 +
Chr2	stalkie_big_nohaplotig	exon	22372057	22372184	100	-	.	Parent=FBgn0021847.1.mrna1;Target=FBgn0021847.1 2003 2130 +
Chr2	stalkie_big_nohaplotig	exon	22373981	22374529	99	-	.	Parent=FBgn0021847.1.mrna1;Target=FBgn0021847.1 1454 2002 +
Chr2	stalkie_big_nohaplotig	exon	22374604	22375522	99	-	.	Parent=FBgn0021847.1.mrna1;Target=FBgn0021847.1 535 1453 +
Chr2	stalkie_big_nohaplotig	exon	22375582	22375693	100	-	.	Parent=FBgn0021847.1.mrna1;Target=FBgn0021847.1 423 534 +
Chr2	stalkie_big_nohaplotig	exon	22375812	22376091	100	-	.	Parent=FBgn0021847.1.mrna1;Target=FBgn0021847.1 143 422 +
Chr2	stalkie_big_nohaplotig	exon	22376301	22376442	99	-	.	Parent=FBgn0021847.1.mrna1;Target=FBgn0021847.1 1 142 +
Chr2	stalkie_big_nohaplotig	CDS	22369704	22369833	.	-	1	Parent=FBgn0021847.1.mrna1;Target=FBgn0021847.1 2442 2571 +
Chr2	stalkie_big_nohaplotig	CDS	22369900	22370096	.	-	0	Parent=FBgn0021847.1.mrna1;Target=FBgn0021847.1 2245 2441 +
Chr2	stalkie_big_nohaplotig	CDS	22370169	22370282	.	-	0	Parent=FBgn0021847.1.mrna1;Target=FBgn0021847.1 2131 2244 +
Chr2	stalkie_big_nohaplotig	CDS	22372057	22372184	.	-	2	Parent=FBgn0021847.1.mrna1;Target=FBgn0021847.1 2003 2130 +
Chr2	stalkie_big_nohaplotig	CDS	22373981	22374529	.	-	2	Parent=FBgn0021847.1.mrna1;Target=FBgn0021847.1 1454 2002 +
Chr2	stalkie_big_nohaplotig	CDS	22374604	22375522	.	-	0	Parent=FBgn0021847.1.mrna1;Target=FBgn0021847.1 535 1453 +
Chr2	stalkie_big_nohaplotig	CDS	22375582	22375693	.	-	1	Parent=FBgn0021847.1.mrna1;Target=FBgn0021847.1 423 534 +
Chr2	stalkie_big_nohaplotig	CDS	22375812	22376091	.	-	2	Parent=FBgn0021847.1.mrna1;Target=FBgn0021847.1 143 422 +
Chr2	stalkie_big_nohaplotig	CDS	22376301	22376442	.	-	0	Parent=FBgn0021847.1.mrna1;Target=FBgn0021847.1 1 142 +
Chr2	gffcl	locus	22378040	22379216	.	+	.	ID=RLOC_00015493;geneIDs=FBgn0032030.4.path1;transcripts=FBgn0032030.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22378040	22379216	.	+	.	ID=FBgn0032030.4.mrna1;geneID=FBgn0032030.4.path1;Name=FBgn0032030.4;Dir=sensecoverage=100.0;identity=99.5;matches=1102;mismatches=5;indels=0;unknowns=0;locus=RLOC_00015493
Chr2	stalkie_big_nohaplotig	exon	22378040	22378133	97	+	.	Parent=FBgn0032030.4.mrna1;Target=FBgn0032030.4 1 94 +
Chr2	stalkie_big_nohaplotig	exon	22378204	22379216	99	+	.	Parent=FBgn0032030.4.mrna1;Target=FBgn0032030.4 95 1107 +
Chr2	stalkie_big_nohaplotig	CDS	22378040	22378133	.	+	0	Parent=FBgn0032030.4.mrna1;Target=FBgn0032030.4 1 94 +
Chr2	stalkie_big_nohaplotig	CDS	22378204	22379216	.	+	2	Parent=FBgn0032030.4.mrna1;Target=FBgn0032030.4 95 1107 +
Chr2	gffcl	locus	22386611	22387837	.	+	.	ID=RLOC_00015494;geneIDs=FBgn0050431.1.path1;transcripts=FBgn0050431.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22386611	22387837	.	+	.	ID=FBgn0050431.1.mrna1;geneID=FBgn0050431.1.path1;Name=FBgn0050431.1;Dir=sensecoverage=100.0;identity=99.7;matches=1120;mismatches=2;indels=1;unknowns=8;locus=RLOC_00015494
Chr2	stalkie_big_nohaplotig	exon	22386611	22387055	99	+	.	Parent=FBgn0050431.1.mrna1;Target=FBgn0050431.1 1 445 +
Chr2	stalkie_big_nohaplotig	exon	22387153	22387837	99	+	.	Parent=FBgn0050431.1.mrna1;Target=FBgn0050431.1 446 1131 +
Chr2	stalkie_big_nohaplotig	CDS	22386611	22387055	.	+	0	Parent=FBgn0050431.1.mrna1;Target=FBgn0050431.1 1 445 +
Chr2	stalkie_big_nohaplotig	CDS	22387153	22387837	.	+	2	Parent=FBgn0050431.1.mrna1;Target=FBgn0050431.1 446 1131 +
Chr2	gffcl	locus	22388199	22389817	.	+	.	ID=RLOC_00015495;geneIDs=comp156822_c0_seq1.path1,comp1358161_c0_seq1.path1;transcripts=comp156822_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22388199	22389424	.	+	.	ID=comp156822_c0_seq1.mrna1;geneID=comp156822_c0_seq1.path1;Name=comp156822_c0_seq1;Dir=indeterminatecoverage=98.6;identity=98.7;matches=1220;mismatches=6;indels=10;unknowns=0;Target=comp156822_c0_seq1 1236 1 .;CDS_Target=comp156822_c0_seq1 821 705 .;locus=RLOC_00015495
Chr2	stalkie_big_nohaplotig	exon	22388199	22389424	98	+	.	Parent=comp156822_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	22388893	22389009	.	+	0	Parent=comp156822_c0_seq1.mrna1
Chr2	gffcl	locus	22402395	23602496	.	-	.	ID=RLOC_00015497;geneIDs=comp158200_c0_seq1.path1;transcripts=comp158200_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22402395	23602496	.	-	.	ID=comp158200_c0_seq1.mrna1;geneID=comp158200_c0_seq1.path1;Name=comp158200_c0_seq1;Dir=sensecoverage=98.1;identity=99.5;matches=2387;mismatches=11;indels=1;unknowns=0;locus=RLOC_00015497
Chr2	stalkie_big_nohaplotig	exon	22402395	22402397	100	-	.	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 2397 2399 +
Chr2	stalkie_big_nohaplotig	exon	22403667	22403670	100	-	.	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 2393 2396 +
Chr2	stalkie_big_nohaplotig	exon	22404604	22404611	100	-	.	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 2385 2392 +
Chr2	stalkie_big_nohaplotig	exon	22415600	22415601	100	-	.	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 2383 2384 +
Chr2	stalkie_big_nohaplotig	exon	22415653	22415654	100	-	.	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 2381 2382 +
Chr2	stalkie_big_nohaplotig	exon	22415880	22415883	100	-	.	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 2377 2380 +
Chr2	stalkie_big_nohaplotig	exon	22423897	22423902	100	-	.	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 2371 2376 +
Chr2	stalkie_big_nohaplotig	exon	22427170	22427172	100	-	.	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 2368 2370 +
Chr2	stalkie_big_nohaplotig	exon	22433113	22433118	100	-	.	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 2362 2367 +
Chr2	stalkie_big_nohaplotig	exon	22438670	22438677	100	-	.	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 2354 2361 +
Chr2	stalkie_big_nohaplotig	exon	23596723	23596959	98	-	.	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 2117 2353 +
Chr2	stalkie_big_nohaplotig	exon	23597022	23597258	100	-	.	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 1880 2116 +
Chr2	stalkie_big_nohaplotig	exon	23597319	23597529	100	-	.	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 1669 1879 +
Chr2	stalkie_big_nohaplotig	exon	23597590	23597823	100	-	.	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 1435 1668 +
Chr2	stalkie_big_nohaplotig	exon	23598894	23599014	100	-	.	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 1314 1434 +
Chr2	stalkie_big_nohaplotig	exon	23599075	23599337	99	-	.	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 1051 1313 +
Chr2	stalkie_big_nohaplotig	exon	23599702	23599860	100	-	.	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 892 1050 +
Chr2	stalkie_big_nohaplotig	exon	23599919	23600107	100	-	.	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 703 891 +
Chr2	stalkie_big_nohaplotig	exon	23600198	23600582	100	-	.	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 318 702 +
Chr2	stalkie_big_nohaplotig	exon	23602180	23602496	98	-	.	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 2 317 +
Chr2	stalkie_big_nohaplotig	CDS	23599795	23599860	.	-	0	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 892 957 +
Chr2	stalkie_big_nohaplotig	CDS	23599919	23600107	.	-	0	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 703 891 +
Chr2	stalkie_big_nohaplotig	CDS	23600198	23600582	.	-	1	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 318 702 +
Chr2	stalkie_big_nohaplotig	CDS	23602180	23602385	.	-	0	Parent=comp158200_c0_seq1.mrna1;Target=comp158200_c0_seq1 112 317 +
Chr2	gffcl	locus	22461895	22463222	.	-	.	ID=RLOC_00015498;geneIDs=comp84318_c0_seq1.path1,comp155320_c0_seq1.path1;transcripts=comp155320_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22462262	22463222	.	-	.	ID=comp155320_c0_seq1.mrna1;geneID=comp155320_c0_seq1.path1;Name=comp155320_c0_seq1;Dir=sensecoverage=99.9;identity=99.8;matches=823;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015498
Chr2	stalkie_big_nohaplotig	exon	22462262	22462638	99	-	.	Parent=comp155320_c0_seq1.mrna1;Target=comp155320_c0_seq1 450 826 +
Chr2	stalkie_big_nohaplotig	exon	22462708	22462816	100	-	.	Parent=comp155320_c0_seq1.mrna1;Target=comp155320_c0_seq1 341 449 +
Chr2	stalkie_big_nohaplotig	exon	22462884	22463222	100	-	.	Parent=comp155320_c0_seq1.mrna1;Target=comp155320_c0_seq1 2 340 +
Chr2	stalkie_big_nohaplotig	CDS	22462388	22462638	.	-	2	Parent=comp155320_c0_seq1.mrna1;Target=comp155320_c0_seq1 450 700 +
Chr2	stalkie_big_nohaplotig	CDS	22462708	22462816	.	-	0	Parent=comp155320_c0_seq1.mrna1;Target=comp155320_c0_seq1 341 449 +
Chr2	stalkie_big_nohaplotig	CDS	22462884	22463189	.	-	0	Parent=comp155320_c0_seq1.mrna1;Target=comp155320_c0_seq1 35 340 +
Chr2	gffcl	locus	22464589	22465653	.	+	.	ID=RLOC_00015499;geneIDs=comp148680_c0_seq1.path1;transcripts=comp148680_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22464589	22465653	.	+	.	ID=comp148680_c0_seq1.mrna1;geneID=comp148680_c0_seq1.path1;Name=comp148680_c0_seq1;Dir=sensecoverage=98.1;identity=97.9;matches=964;mismatches=12;indels=9;unknowns=0;locus=RLOC_00015499
Chr2	stalkie_big_nohaplotig	exon	22464589	22464917	100	+	.	Parent=comp148680_c0_seq1.mrna1;Target=comp148680_c0_seq1 1 329 +
Chr2	stalkie_big_nohaplotig	exon	22465007	22465653	96	+	.	Parent=comp148680_c0_seq1.mrna1;Target=comp148680_c0_seq1 330 985 +
Chr2	stalkie_big_nohaplotig	CDS	22464615	22464917	.	+	0	Parent=comp148680_c0_seq1.mrna1;Target=comp148680_c0_seq1 27 329 +
Chr2	stalkie_big_nohaplotig	CDS	22465007	22465342	.	+	0	Parent=comp148680_c0_seq1.mrna1;Target=comp148680_c0_seq1 330 665 +
Chr2	gffcl	locus	22469185	22469954	.	+	.	ID=RLOC_00015500;geneIDs=comp148745_c0_seq1.path1;transcripts=comp148745_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22469185	22469954	.	+	.	ID=comp148745_c0_seq1.mrna1;geneID=comp148745_c0_seq1.path1;Name=comp148745_c0_seq1;Dir=sensecoverage=86.6;identity=99.4;matches=657;mismatches=4;indels=0;unknowns=0;locus=RLOC_00015500
Chr2	stalkie_big_nohaplotig	exon	22469185	22469494	99	+	.	Parent=comp148745_c0_seq1.mrna1;Target=comp148745_c0_seq1 1 310 +
Chr2	stalkie_big_nohaplotig	exon	22469544	22469652	100	+	.	Parent=comp148745_c0_seq1.mrna1;Target=comp148745_c0_seq1 311 419 +
Chr2	stalkie_big_nohaplotig	exon	22469713	22469954	98	+	.	Parent=comp148745_c0_seq1.mrna1;Target=comp148745_c0_seq1 420 661 +
Chr2	stalkie_big_nohaplotig	CDS	22469378	22469494	.	+	0	Parent=comp148745_c0_seq1.mrna1;Target=comp148745_c0_seq1 194 310 +
Chr2	stalkie_big_nohaplotig	CDS	22469544	22469652	.	+	0	Parent=comp148745_c0_seq1.mrna1;Target=comp148745_c0_seq1 311 419 +
Chr2	stalkie_big_nohaplotig	CDS	22469713	22469933	.	+	2	Parent=comp148745_c0_seq1.mrna1;Target=comp148745_c0_seq1 420 640 +
Chr2	gffcl	locus	22479142	22480164	.	-	.	ID=RLOC_00015501;geneIDs=comp152724_c0_seq1.path1;transcripts=comp152724_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22479142	22480164	.	-	.	ID=comp152724_c0_seq1.mrna1;geneID=comp152724_c0_seq1.path1;Name=comp152724_c0_seq1;Dir=antisensecoverage=99.9;identity=94.8;matches=849;mismatches=40;indels=7;unknowns=0;locus=RLOC_00015501
Chr2	stalkie_big_nohaplotig	exon	22479142	22479671	93	-	.	Parent=comp152724_c0_seq1.mrna1;Target=comp152724_c0_seq1 1 523 -
Chr2	stalkie_big_nohaplotig	exon	22479742	22479850	100	-	.	Parent=comp152724_c0_seq1.mrna1;Target=comp152724_c0_seq1 524 632 -
Chr2	stalkie_big_nohaplotig	exon	22479908	22480164	94	-	.	Parent=comp152724_c0_seq1.mrna1;Target=comp152724_c0_seq1 633 889 -
Chr2	stalkie_big_nohaplotig	CDS	22479439	22479671	.	-	2	Parent=comp152724_c0_seq1.mrna1;Target=comp152724_c0_seq1 291 523 .
Chr2	stalkie_big_nohaplotig	CDS	22479742	22479850	.	-	0	Parent=comp152724_c0_seq1.mrna1;Target=comp152724_c0_seq1 524 632 .
Chr2	stalkie_big_nohaplotig	CDS	22479908	22480030	.	-	0	Parent=comp152724_c0_seq1.mrna1;Target=comp152724_c0_seq1 633 755 .
Chr2	gffcl	locus	22482030	22482908	.	+	.	ID=RLOC_00015502;geneIDs=comp157017_c0_seq1.path1;transcripts=comp157017_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22482030	22482908	.	+	.	ID=comp157017_c0_seq1.mrna1;geneID=comp157017_c0_seq1.path1;Name=comp157017_c0_seq1;Dir=sensecoverage=99.8;identity=96.1;matches=785;mismatches=32;indels=0;unknowns=0;locus=RLOC_00015502
Chr2	stalkie_big_nohaplotig	exon	22482030	22482399	96	+	.	Parent=comp157017_c0_seq1.mrna1;Target=comp157017_c0_seq1 1 370 +
Chr2	stalkie_big_nohaplotig	exon	22482462	22482908	95	+	.	Parent=comp157017_c0_seq1.mrna1;Target=comp157017_c0_seq1 371 817 +
Chr2	stalkie_big_nohaplotig	CDS	22482106	22482399	.	+	0	Parent=comp157017_c0_seq1.mrna1;Target=comp157017_c0_seq1 77 370 +
Chr2	stalkie_big_nohaplotig	CDS	22482462	22482797	.	+	0	Parent=comp157017_c0_seq1.mrna1;Target=comp157017_c0_seq1 371 706 +
Chr2	gffcl	locus	22495205	22497574	.	+	.	ID=RLOC_00015503;geneIDs=FBgn0033065.1.path1;transcripts=FBgn0033065.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22495205	22497574	.	+	.	ID=FBgn0033065.1.mrna1;geneID=FBgn0033065.1.path1;Name=FBgn0033065.1;Dir=sensecoverage=100.0;identity=99.9;matches=1583;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015503
Chr2	stalkie_big_nohaplotig	exon	22495205	22495729	100	+	.	Parent=FBgn0033065.1.mrna1;Target=FBgn0033065.1 1 525 +
Chr2	stalkie_big_nohaplotig	exon	22496458	22497237	100	+	.	Parent=FBgn0033065.1.mrna1;Target=FBgn0033065.1 526 1305 +
Chr2	stalkie_big_nohaplotig	exon	22497296	22497574	99	+	.	Parent=FBgn0033065.1.mrna1;Target=FBgn0033065.1 1306 1584 +
Chr2	stalkie_big_nohaplotig	CDS	22495205	22495729	.	+	0	Parent=FBgn0033065.1.mrna1;Target=FBgn0033065.1 1 525 +
Chr2	stalkie_big_nohaplotig	CDS	22496458	22497237	.	+	0	Parent=FBgn0033065.1.mrna1;Target=FBgn0033065.1 526 1305 +
Chr2	stalkie_big_nohaplotig	CDS	22497296	22497574	.	+	0	Parent=FBgn0033065.1.mrna1;Target=FBgn0033065.1 1306 1584 +
Chr2	gffcl	locus	22526333	22526724	.	+	.	ID=RLOC_00015504;geneIDs=comp136424_c1_seq1.path1;transcripts=comp136424_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22526333	22526724	.	+	.	ID=comp136424_c1_seq1.mrna1;geneID=comp136424_c1_seq1.path1;Name=comp136424_c1_seq1;Dir=indeterminatecoverage=99.7;identity=99.2;matches=390;mismatches=1;indels=2;unknowns=0;Target=comp136424_c1_seq1 393 2 .;CDS_Target=comp136424_c1_seq1 98 3 .;locus=RLOC_00015504
Chr2	stalkie_big_nohaplotig	exon	22526333	22526724	99	+	.	Parent=comp136424_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	22526334	22526428	.	+	0	Parent=comp136424_c1_seq1.mrna1
Chr2	gffcl	locus	22566756	22567490	.	+	.	ID=RLOC_00015505;geneIDs=comp152770_c0_seq1.path1;transcripts=comp152770_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22566756	22567490	.	+	.	ID=comp152770_c0_seq1.mrna1;geneID=comp152770_c0_seq1.path1;Name=comp152770_c0_seq1;Dir=indeterminatecoverage=97.4;identity=99.6;matches=732;mismatches=3;indels=0;unknowns=0;Target=comp152770_c0_seq1 737 3 .;CDS_Target=comp152770_c0_seq1 517 101 .;locus=RLOC_00015505
Chr2	stalkie_big_nohaplotig	exon	22566756	22567490	99	+	.	Parent=comp152770_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	22566854	22567270	.	+	0	Parent=comp152770_c0_seq1.mrna1
Chr2	gffcl	locus	22587489	22589017	.	-	.	ID=RLOC_00015506;geneIDs=comp158161_c0_seq1.path1;transcripts=comp158161_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22587489	22589017	.	-	.	ID=comp158161_c0_seq1.mrna1;geneID=comp158161_c0_seq1.path1;Name=comp158161_c0_seq1;Dir=antisensecoverage=98.8;identity=97.0;matches=1068;mismatches=20;indels=13;unknowns=0;Target=comp158161_c0_seq1 764 1036 .;locus=RLOC_00015506
Chr2	stalkie_big_nohaplotig	exon	22587489	22587859	95	-	.	Parent=comp158161_c0_seq1.mrna1;Target=comp158161_c0_seq1 14 397 -
Chr2	stalkie_big_nohaplotig	exon	22587913	22587994	95	-	.	Parent=comp158161_c0_seq1.mrna1;Target=comp158161_c0_seq1 398 479 -
Chr2	stalkie_big_nohaplotig	exon	22588045	22588061	100	-	.	Parent=comp158161_c0_seq1.mrna1;Target=comp158161_c0_seq1 480 496 -
Chr2	stalkie_big_nohaplotig	exon	22588194	22588249	100	-	.	Parent=comp158161_c0_seq1.mrna1;Target=comp158161_c0_seq1 497 552 -
Chr2	stalkie_big_nohaplotig	exon	22588310	22588387	100	-	.	Parent=comp158161_c0_seq1.mrna1;Target=comp158161_c0_seq1 553 630 -
Chr2	stalkie_big_nohaplotig	exon	22588534	22589017	97	-	.	Parent=comp158161_c0_seq1.mrna1;Target=comp158161_c0_seq1 631 1114 -
Chr2	stalkie_big_nohaplotig	CDS	22588667	22588939	.	-	0	Parent=comp158161_c0_seq1.mrna1
Chr2	gffcl	locus	22613684	22613912	.	-	.	ID=RLOC_00015507;geneIDs=comp58449_c0_seq1.path1;transcripts=comp58449_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22613684	22613912	.	-	.	ID=comp58449_c0_seq1.mrna1;geneID=comp58449_c0_seq1.path1;Name=comp58449_c0_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=229;mismatches=0;indels=0;unknowns=0;Target=comp58449_c0_seq1 229 1 .;CDS_Target=comp58449_c0_seq1 136 2 .;locus=RLOC_00015507
Chr2	stalkie_big_nohaplotig	exon	22613684	22613912	100	-	.	Parent=comp58449_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	22613777	22613911	.	-	0	Parent=comp58449_c0_seq1.mrna1
Chr2	gffcl	locus	22614257	22614976	.	-	.	ID=RLOC_00015508;geneIDs=FBgn0034295.1.path1;transcripts=FBgn0034295.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22614257	22614976	.	-	.	ID=FBgn0034295.1.mrna1;geneID=FBgn0034295.1.path1;Name=FBgn0034295.1;Dir=sensecoverage=100.0;identity=100.0;matches=657;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015508
Chr2	stalkie_big_nohaplotig	exon	22614257	22614481	100	-	.	Parent=FBgn0034295.1.mrna1;Target=FBgn0034295.1 433 657 +
Chr2	stalkie_big_nohaplotig	exon	22614545	22614976	100	-	.	Parent=FBgn0034295.1.mrna1;Target=FBgn0034295.1 1 432 +
Chr2	stalkie_big_nohaplotig	CDS	22614257	22614481	.	-	0	Parent=FBgn0034295.1.mrna1;Target=FBgn0034295.1 433 657 +
Chr2	stalkie_big_nohaplotig	CDS	22614545	22614976	.	-	0	Parent=FBgn0034295.1.mrna1;Target=FBgn0034295.1 1 432 +
Chr2	gffcl	locus	22620798	22621599	.	+	.	ID=RLOC_00015509;geneIDs=Dv_FBgn0209268.1.path1;transcripts=Dv_FBgn0209268.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22620798	22621599	.	+	.	ID=Dv_FBgn0209268.1.mrna1;geneID=Dv_FBgn0209268.1.path1;Name=Dv_FBgn0209268.1;Dir=sensecoverage=100.0;identity=100.0;matches=630;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015509
Chr2	stalkie_big_nohaplotig	exon	22620798	22621181	100	+	.	Parent=Dv_FBgn0209268.1.mrna1;Target=Dv_FBgn0209268.1 1 384 +
Chr2	stalkie_big_nohaplotig	exon	22621354	22621599	100	+	.	Parent=Dv_FBgn0209268.1.mrna1;Target=Dv_FBgn0209268.1 385 630 +
Chr2	stalkie_big_nohaplotig	CDS	22620798	22621181	.	+	0	Parent=Dv_FBgn0209268.1.mrna1;Target=Dv_FBgn0209268.1 1 384 +
Chr2	stalkie_big_nohaplotig	CDS	22621354	22621599	.	+	0	Parent=Dv_FBgn0209268.1.mrna1;Target=Dv_FBgn0209268.1 385 630 +
Chr2	gffcl	locus	22621636	22621906	.	+	.	ID=RLOC_00015510;geneIDs=comp64351_c0_seq1.path1;transcripts=comp64351_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22621636	22621906	.	+	.	ID=comp64351_c0_seq1.mrna1;geneID=comp64351_c0_seq1.path1;Name=comp64351_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=268;mismatches=3;indels=0;unknowns=0;Target=comp64351_c0_seq1 271 1 .;CDS_Target=comp64351_c0_seq1 132 1 .;locus=RLOC_00015510
Chr2	stalkie_big_nohaplotig	exon	22621636	22621906	98	+	.	Parent=comp64351_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	22621636	22621767	.	+	0	Parent=comp64351_c0_seq1.mrna1
Chr2	gffcl	locus	22669036	22880729	.	+	.	ID=RLOC_00015511;geneIDs=FBgn0000546.1.path1;transcripts=FBgn0000546.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22669036	22880729	.	+	.	ID=FBgn0000546.1.mrna1;geneID=FBgn0000546.1.path1;Name=FBgn0000546.1;Dir=sensecoverage=100.0;identity=100.0;matches=2054;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015511
Chr2	stalkie_big_nohaplotig	exon	22669036	22669370	100	+	.	Parent=FBgn0000546.1.mrna1;Target=FBgn0000546.1 1 335 +
Chr2	stalkie_big_nohaplotig	exon	22669437	22669609	100	+	.	Parent=FBgn0000546.1.mrna1;Target=FBgn0000546.1 336 508 +
Chr2	stalkie_big_nohaplotig	exon	22878089	22878570	100	+	.	Parent=FBgn0000546.1.mrna1;Target=FBgn0000546.1 509 990 +
Chr2	stalkie_big_nohaplotig	exon	22878651	22878794	100	+	.	Parent=FBgn0000546.1.mrna1;Target=FBgn0000546.1 991 1134 +
Chr2	stalkie_big_nohaplotig	exon	22879738	22879890	100	+	.	Parent=FBgn0000546.1.mrna1;Target=FBgn0000546.1 1135 1287 +
Chr2	stalkie_big_nohaplotig	exon	22879962	22880729	99	+	.	Parent=FBgn0000546.1.mrna1;Target=FBgn0000546.1 1288 2055 +
Chr2	stalkie_big_nohaplotig	CDS	22669036	22669370	.	+	0	Parent=FBgn0000546.1.mrna1;Target=FBgn0000546.1 1 335 +
Chr2	stalkie_big_nohaplotig	CDS	22669437	22669609	.	+	1	Parent=FBgn0000546.1.mrna1;Target=FBgn0000546.1 336 508 +
Chr2	stalkie_big_nohaplotig	CDS	22878089	22878570	.	+	2	Parent=FBgn0000546.1.mrna1;Target=FBgn0000546.1 509 990 +
Chr2	stalkie_big_nohaplotig	CDS	22878651	22878794	.	+	0	Parent=FBgn0000546.1.mrna1;Target=FBgn0000546.1 991 1134 +
Chr2	stalkie_big_nohaplotig	CDS	22879738	22879890	.	+	0	Parent=FBgn0000546.1.mrna1;Target=FBgn0000546.1 1135 1287 +
Chr2	stalkie_big_nohaplotig	CDS	22879962	22880729	.	+	0	Parent=FBgn0000546.1.mrna1;Target=FBgn0000546.1 1288 2055 +
Chr2	gffcl	locus	22831401	23259400	.	.	.	ID=RLOC_00015512;geneIDs=FBgn0020767.1.path1,comp149598_c0_seq1.path1,comp154756_c0_seq1.path1,comp162829_c3_seq1.path1;transcripts=comp162829_c3_seq1.mrna1,FBgn0020767.1.mrna1,comp149598_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22831401	23259400	.	+	.	ID=comp162829_c3_seq1.mrna1;geneID=comp162829_c3_seq1.path1;Name=comp162829_c3_seq1;Dir=indeterminatecoverage=65.0;identity=100.0;matches=405;mismatches=0;indels=0;unknowns=0;Target=comp162829_c3_seq1 418 332 .;locus=RLOC_00015512
Chr2	stalkie_big_nohaplotig	exon	22831401	22831416	100	+	.	Parent=comp162829_c3_seq1.mrna1;Target=comp162829_c3_seq1 235 220 .
Chr2	stalkie_big_nohaplotig	exon	22832831	22832834	100	+	.	Parent=comp162829_c3_seq1.mrna1;Target=comp162829_c3_seq1 239 236 .
Chr2	stalkie_big_nohaplotig	exon	22840869	22840871	100	+	.	Parent=comp162829_c3_seq1.mrna1;Target=comp162829_c3_seq1 242 240 .
Chr2	stalkie_big_nohaplotig	exon	23211219	23211220	100	+	.	Parent=comp162829_c3_seq1.mrna1;Target=comp162829_c3_seq1 244 243 .
Chr2	stalkie_big_nohaplotig	exon	23221255	23221258	100	+	.	Parent=comp162829_c3_seq1.mrna1;Target=comp162829_c3_seq1 248 245 .
Chr2	stalkie_big_nohaplotig	exon	23222803	23222812	100	+	.	Parent=comp162829_c3_seq1.mrna1;Target=comp162829_c3_seq1 258 249 .
Chr2	stalkie_big_nohaplotig	exon	23227815	23227817	100	+	.	Parent=comp162829_c3_seq1.mrna1;Target=comp162829_c3_seq1 263 261 .
Chr2	stalkie_big_nohaplotig	exon	23243431	23243435	100	+	.	Parent=comp162829_c3_seq1.mrna1;Target=comp162829_c3_seq1 268 264 .
Chr2	stalkie_big_nohaplotig	exon	23249525	23249531	100	+	.	Parent=comp162829_c3_seq1.mrna1;Target=comp162829_c3_seq1 275 269 .
Chr2	stalkie_big_nohaplotig	exon	23257537	23257541	100	+	.	Parent=comp162829_c3_seq1.mrna1;Target=comp162829_c3_seq1 280 276 .
Chr2	stalkie_big_nohaplotig	exon	23259055	23259400	100	+	.	Parent=comp162829_c3_seq1.mrna1;Target=comp162829_c3_seq1 626 281 .
Chr2	stalkie_big_nohaplotig	CDS	23259106	23259192	.	+	0	Parent=comp162829_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23243174	23251664	.	+	.	ID=FBgn0020767.1.mrna1;geneID=FBgn0020767.1.path1;Name=FBgn0020767.1;Dir=sensecoverage=97.7;identity=100.0;matches=1237;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015512
Chr2	stalkie_big_nohaplotig	exon	23243174	23243351	100	+	.	Parent=FBgn0020767.1.mrna1;Target=FBgn0020767.1 30 207 +
Chr2	stalkie_big_nohaplotig	exon	23243425	23243593	100	+	.	Parent=FBgn0020767.1.mrna1;Target=FBgn0020767.1 208 376 +
Chr2	stalkie_big_nohaplotig	exon	23247681	23247760	100	+	.	Parent=FBgn0020767.1.mrna1;Target=FBgn0020767.1 377 456 +
Chr2	stalkie_big_nohaplotig	exon	23248715	23248790	100	+	.	Parent=FBgn0020767.1.mrna1;Target=FBgn0020767.1 457 532 +
Chr2	stalkie_big_nohaplotig	exon	23248859	23249468	100	+	.	Parent=FBgn0020767.1.mrna1;Target=FBgn0020767.1 533 1142 +
Chr2	stalkie_big_nohaplotig	exon	23251541	23251664	100	+	.	Parent=FBgn0020767.1.mrna1;Target=FBgn0020767.1 1143 1266 +
Chr2	stalkie_big_nohaplotig	CDS	23243175	23243351	.	+	0	Parent=FBgn0020767.1.mrna1;Target=FBgn0020767.1 31 207 +
Chr2	stalkie_big_nohaplotig	CDS	23243425	23243593	.	+	0	Parent=FBgn0020767.1.mrna1;Target=FBgn0020767.1 208 376 +
Chr2	stalkie_big_nohaplotig	CDS	23247681	23247760	.	+	2	Parent=FBgn0020767.1.mrna1;Target=FBgn0020767.1 377 456 +
Chr2	stalkie_big_nohaplotig	CDS	23248715	23248790	.	+	0	Parent=FBgn0020767.1.mrna1;Target=FBgn0020767.1 457 532 +
Chr2	stalkie_big_nohaplotig	CDS	23248859	23249468	.	+	2	Parent=FBgn0020767.1.mrna1;Target=FBgn0020767.1 533 1142 +
Chr2	stalkie_big_nohaplotig	CDS	23251541	23251664	.	+	1	Parent=FBgn0020767.1.mrna1;Target=FBgn0020767.1 1143 1266 +
Chr2	stalkie_big_nohaplotig	mRNA	23254674	23257451	.	+	.	ID=comp149598_c0_seq1.mrna1;geneID=comp149598_c0_seq1.path1;Name=comp149598_c0_seq1;Dir=indeterminatecoverage=75.4;identity=94.8;matches=470;mismatches=16;indels=10;unknowns=0;Target=comp149598_c0_seq1 466 425 .;locus=RLOC_00015512
Chr2	stalkie_big_nohaplotig	exon	23254674	23254706	81	+	.	Parent=comp149598_c0_seq1.mrna1;Target=comp149598_c0_seq1 192 161 .
Chr2	stalkie_big_nohaplotig	exon	23255411	23255415	100	+	.	Parent=comp149598_c0_seq1.mrna1;Target=comp149598_c0_seq1 197 193 .
Chr2	stalkie_big_nohaplotig	exon	23256944	23256977	78	+	.	Parent=comp149598_c0_seq1.mrna1;Target=comp149598_c0_seq1 232 198 .
Chr2	stalkie_big_nohaplotig	exon	23257033	23257451	97	+	.	Parent=comp149598_c0_seq1.mrna1;Target=comp149598_c0_seq1 651 233 .
Chr2	stalkie_big_nohaplotig	CDS	23257225	23257266	.	+	0	Parent=comp149598_c0_seq1.mrna1
Chr2	gffcl	locus	22883460	22884061	.	-	.	ID=RLOC_00015513;geneIDs=comp113592_c0_seq1.path1;transcripts=comp113592_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22883460	22884061	.	-	.	ID=comp113592_c0_seq1.mrna1;geneID=comp113592_c0_seq1.path1;Name=comp113592_c0_seq1;Dir=indeterminatecoverage=97.9;identity=99.5;matches=601;mismatches=1;indels=2;unknowns=0;Target=comp113592_c0_seq1 613 10 .;CDS_Target=comp113592_c0_seq1 51 10 .;locus=RLOC_00015513
Chr2	stalkie_big_nohaplotig	exon	22883460	22884061	99	-	.	Parent=comp113592_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	22884020	22884061	.	-	0	Parent=comp113592_c0_seq1.mrna1
Chr2	gffcl	locus	22887485	22888221	.	+	.	ID=RLOC_00015514;geneIDs=comp153053_c0_seq1.path1;transcripts=comp153053_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22887485	22888221	.	+	.	ID=comp153053_c0_seq1.mrna1;geneID=comp153053_c0_seq1.path1;Name=comp153053_c0_seq1;Dir=indeterminatecoverage=79.4;identity=96.2;matches=717;mismatches=17;indels=11;unknowns=0;Target=comp153053_c0_seq1 742 1 .;CDS_Target=comp153053_c0_seq1 624 508 .;locus=RLOC_00015514
Chr2	stalkie_big_nohaplotig	exon	22887485	22888221	96	+	.	Parent=comp153053_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	22887995	22888103	.	+	0	Parent=comp153053_c0_seq1.mrna1
Chr2	gffcl	locus	22888328	22889084	.	+	.	ID=RLOC_00015515;geneIDs=comp118479_c0_seq1.path1;transcripts=comp118479_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22888328	22889084	.	+	.	ID=comp118479_c0_seq1.mrna1;geneID=comp118479_c0_seq1.path1;Name=comp118479_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.8;matches=752;mismatches=5;indels=28;unknowns=0;Target=comp118479_c0_seq1 785 1 .;CDS_Target=comp118479_c0_seq1 55 2 .;locus=RLOC_00015515
Chr2	stalkie_big_nohaplotig	exon	22888328	22889084	95	+	.	Parent=comp118479_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	22888329	22888354	.	+	0	Parent=comp118479_c0_seq1.mrna1
Chr2	gffcl	locus	22890338	22890627	.	+	.	ID=RLOC_00015516;geneIDs=comp117371_c0_seq1.path1;transcripts=comp117371_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22890338	22890627	.	+	.	ID=comp117371_c0_seq1.mrna1;geneID=comp117371_c0_seq1.path1;Name=comp117371_c0_seq1;Dir=indeterminatecoverage=91.9;identity=92.8;matches=285;mismatches=5;indels=17;unknowns=0;Target=comp117371_c0_seq1 307 1 .;CDS_Target=comp117371_c0_seq1 235 131 .;locus=RLOC_00015516
Chr2	stalkie_big_nohaplotig	exon	22890338	22890627	92	+	.	Parent=comp117371_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	22890452	22890555	.	+	0	Parent=comp117371_c0_seq1.mrna1
Chr2	gffcl	locus	22901946	22904538	.	+	.	ID=RLOC_00015518;geneIDs=FBgn0031860.1.path1;transcripts=FBgn0031860.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22901946	22904538	.	+	.	ID=FBgn0031860.1.mrna1;geneID=FBgn0031860.1.path1;Name=FBgn0031860.1;Dir=sensecoverage=100.0;identity=100.0;matches=1020;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015518
Chr2	stalkie_big_nohaplotig	exon	22901946	22902157	100	+	.	Parent=FBgn0031860.1.mrna1;Target=FBgn0031860.1 1 212 +
Chr2	stalkie_big_nohaplotig	exon	22902220	22902429	100	+	.	Parent=FBgn0031860.1.mrna1;Target=FBgn0031860.1 213 422 +
Chr2	stalkie_big_nohaplotig	exon	22902501	22902797	100	+	.	Parent=FBgn0031860.1.mrna1;Target=FBgn0031860.1 423 719 +
Chr2	stalkie_big_nohaplotig	exon	22904174	22904367	100	+	.	Parent=FBgn0031860.1.mrna1;Target=FBgn0031860.1 720 913 +
Chr2	stalkie_big_nohaplotig	exon	22904432	22904538	100	+	.	Parent=FBgn0031860.1.mrna1;Target=FBgn0031860.1 914 1020 +
Chr2	stalkie_big_nohaplotig	CDS	22901946	22902157	.	+	0	Parent=FBgn0031860.1.mrna1;Target=FBgn0031860.1 1 212 +
Chr2	stalkie_big_nohaplotig	CDS	22902220	22902429	.	+	1	Parent=FBgn0031860.1.mrna1;Target=FBgn0031860.1 213 422 +
Chr2	stalkie_big_nohaplotig	CDS	22902501	22902797	.	+	1	Parent=FBgn0031860.1.mrna1;Target=FBgn0031860.1 423 719 +
Chr2	stalkie_big_nohaplotig	CDS	22904174	22904367	.	+	1	Parent=FBgn0031860.1.mrna1;Target=FBgn0031860.1 720 913 +
Chr2	stalkie_big_nohaplotig	CDS	22904432	22904538	.	+	2	Parent=FBgn0031860.1.mrna1;Target=FBgn0031860.1 914 1020 +
Chr2	gffcl	locus	22906366	22912858	.	-	.	ID=RLOC_00015519;geneIDs=comp141029_c0_seq1.path1;transcripts=comp141029_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22906366	22912858	.	-	.	ID=comp141029_c0_seq1.mrna1;geneID=comp141029_c0_seq1.path1;Name=comp141029_c0_seq1;Dir=indeterminatecoverage=69.9;identity=94.8;matches=533;mismatches=13;indels=16;unknowns=0;Target=comp141029_c0_seq1 297 271 .;locus=RLOC_00015519
Chr2	stalkie_big_nohaplotig	exon	22906366	22906826	99	-	.	Parent=comp141029_c0_seq1.mrna1;Target=comp141029_c0_seq1 893 433 .
Chr2	stalkie_big_nohaplotig	exon	22907098	22907108	81	-	.	Parent=comp141029_c0_seq1.mrna1;Target=comp141029_c0_seq1 432 422 .
Chr2	stalkie_big_nohaplotig	exon	22907808	22907813	100	-	.	Parent=comp141029_c0_seq1.mrna1;Target=comp141029_c0_seq1 421 416 .
Chr2	stalkie_big_nohaplotig	exon	22908564	22908572	100	-	.	Parent=comp141029_c0_seq1.mrna1;Target=comp141029_c0_seq1 415 407 .
Chr2	stalkie_big_nohaplotig	exon	22910177	22910191	93	-	.	Parent=comp141029_c0_seq1.mrna1;Target=comp141029_c0_seq1 406 392 .
Chr2	stalkie_big_nohaplotig	exon	22911857	22911874	66	-	.	Parent=comp141029_c0_seq1.mrna1;Target=comp141029_c0_seq1 391 374 .
Chr2	stalkie_big_nohaplotig	exon	22912834	22912858	56	-	.	Parent=comp141029_c0_seq1.mrna1;Target=comp141029_c0_seq1 310 270 .
Chr2	stalkie_big_nohaplotig	CDS	22912845	22912857	.	-	0	Parent=comp141029_c0_seq1.mrna1
Chr2	gffcl	locus	22910255	22957100	.	-	.	ID=RLOC_00015520;geneIDs=FBgn0259221.1.path1;transcripts=FBgn0259221.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22910255	22957100	.	-	.	ID=FBgn0259221.1.mrna1;geneID=FBgn0259221.1.path1;Name=FBgn0259221.1;Dir=sensecoverage=100.0;identity=99.6;matches=3744;mismatches=15;indels=0;unknowns=0;locus=RLOC_00015520
Chr2	stalkie_big_nohaplotig	exon	22910255	22910349	98	-	.	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 3665 3759 +
Chr2	stalkie_big_nohaplotig	exon	22913657	22913739	100	-	.	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 3582 3664 +
Chr2	stalkie_big_nohaplotig	exon	22930848	22930946	100	-	.	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 3483 3581 +
Chr2	stalkie_big_nohaplotig	exon	22931021	22931274	100	-	.	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 3229 3482 +
Chr2	stalkie_big_nohaplotig	exon	22932556	22933164	99	-	.	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 2620 3228 +
Chr2	stalkie_big_nohaplotig	exon	22933238	22933435	100	-	.	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 2422 2619 +
Chr2	stalkie_big_nohaplotig	exon	22933500	22934261	99	-	.	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 1660 2421 +
Chr2	stalkie_big_nohaplotig	exon	22935365	22935586	100	-	.	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 1438 1659 +
Chr2	stalkie_big_nohaplotig	exon	22935650	22935759	99	-	.	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 1328 1437 +
Chr2	stalkie_big_nohaplotig	exon	22935820	22936097	99	-	.	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 1050 1327 +
Chr2	stalkie_big_nohaplotig	exon	22936193	22936390	97	-	.	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 852 1049 +
Chr2	stalkie_big_nohaplotig	exon	22936461	22936621	100	-	.	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 691 851 +
Chr2	stalkie_big_nohaplotig	exon	22936758	22936941	100	-	.	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 507 690 +
Chr2	stalkie_big_nohaplotig	exon	22937063	22937183	100	-	.	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 386 506 +
Chr2	stalkie_big_nohaplotig	exon	22956716	22957100	100	-	.	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 1 385 +
Chr2	stalkie_big_nohaplotig	CDS	22910255	22910349	.	-	2	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 3665 3759 +
Chr2	stalkie_big_nohaplotig	CDS	22913657	22913739	.	-	1	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 3582 3664 +
Chr2	stalkie_big_nohaplotig	CDS	22930848	22930946	.	-	1	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 3483 3581 +
Chr2	stalkie_big_nohaplotig	CDS	22931021	22931274	.	-	0	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 3229 3482 +
Chr2	stalkie_big_nohaplotig	CDS	22932556	22933164	.	-	0	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 2620 3228 +
Chr2	stalkie_big_nohaplotig	CDS	22933238	22933435	.	-	0	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 2422 2619 +
Chr2	stalkie_big_nohaplotig	CDS	22933500	22934261	.	-	0	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 1660 2421 +
Chr2	stalkie_big_nohaplotig	CDS	22935365	22935586	.	-	0	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 1438 1659 +
Chr2	stalkie_big_nohaplotig	CDS	22935650	22935759	.	-	2	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 1328 1437 +
Chr2	stalkie_big_nohaplotig	CDS	22935820	22936097	.	-	1	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 1050 1327 +
Chr2	stalkie_big_nohaplotig	CDS	22936193	22936390	.	-	1	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 852 1049 +
Chr2	stalkie_big_nohaplotig	CDS	22936461	22936621	.	-	0	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 691 851 +
Chr2	stalkie_big_nohaplotig	CDS	22936758	22936941	.	-	1	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 507 690 +
Chr2	stalkie_big_nohaplotig	CDS	22937063	22937183	.	-	2	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 386 506 +
Chr2	stalkie_big_nohaplotig	CDS	22956716	22957100	.	-	0	Parent=FBgn0259221.1.mrna1;Target=FBgn0259221.1 1 385 +
Chr2	gffcl	locus	22943771	22944838	.	+	.	ID=RLOC_00015521;geneIDs=FBgn0040625.1.path1;transcripts=FBgn0040625.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22943771	22944838	.	+	.	ID=FBgn0040625.1.mrna1;geneID=FBgn0040625.1.path1;Name=FBgn0040625.1;Dir=sensecoverage=100.0;identity=99.3;matches=935;mismatches=7;indels=0;unknowns=0;locus=RLOC_00015521
Chr2	stalkie_big_nohaplotig	exon	22943771	22944368	98	+	.	Parent=FBgn0040625.1.mrna1;Target=FBgn0040625.1 1 598 +
Chr2	stalkie_big_nohaplotig	exon	22944425	22944596	100	+	.	Parent=FBgn0040625.1.mrna1;Target=FBgn0040625.1 599 770 +
Chr2	stalkie_big_nohaplotig	exon	22944667	22944838	100	+	.	Parent=FBgn0040625.1.mrna1;Target=FBgn0040625.1 771 942 +
Chr2	stalkie_big_nohaplotig	CDS	22943771	22944368	.	+	0	Parent=FBgn0040625.1.mrna1;Target=FBgn0040625.1 1 598 +
Chr2	stalkie_big_nohaplotig	CDS	22944425	22944596	.	+	2	Parent=FBgn0040625.1.mrna1;Target=FBgn0040625.1 599 770 +
Chr2	stalkie_big_nohaplotig	CDS	22944667	22944838	.	+	1	Parent=FBgn0040625.1.mrna1;Target=FBgn0040625.1 771 942 +
Chr2	gffcl	locus	22964047	22968585	.	+	.	ID=RLOC_00015522;geneIDs=comp151956_c0_seq1.path1;transcripts=comp151956_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22964047	22968585	.	+	.	ID=comp151956_c0_seq1.mrna1;geneID=comp151956_c0_seq1.path1;Name=comp151956_c0_seq1;Dir=antisensecoverage=99.9;identity=98.3;matches=823;mismatches=14;indels=0;unknowns=0;locus=RLOC_00015522
Chr2	stalkie_big_nohaplotig	exon	22964047	22964352	98	+	.	Parent=comp151956_c0_seq1.mrna1;Target=comp151956_c0_seq1 533 838 -
Chr2	stalkie_big_nohaplotig	exon	22964423	22964661	100	+	.	Parent=comp151956_c0_seq1.mrna1;Target=comp151956_c0_seq1 294 532 -
Chr2	stalkie_big_nohaplotig	exon	22968294	22968585	96	+	.	Parent=comp151956_c0_seq1.mrna1;Target=comp151956_c0_seq1 2 293 -
Chr2	stalkie_big_nohaplotig	CDS	22964613	22964661	.	+	0	Parent=comp151956_c0_seq1.mrna1;Target=comp151956_c0_seq1 294 342 .
Chr2	stalkie_big_nohaplotig	CDS	22968294	22968400	.	+	2	Parent=comp151956_c0_seq1.mrna1;Target=comp151956_c0_seq1 187 293 .
Chr2	gffcl	locus	22980542	22982427	.	-	.	ID=RLOC_00015523;geneIDs=FBgn0034501.1.path1;transcripts=FBgn0034501.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22980542	22982427	.	-	.	ID=FBgn0034501.1.mrna1;geneID=FBgn0034501.1.path1;Name=FBgn0034501.1;Dir=sensecoverage=100.0;identity=98.7;matches=1744;mismatches=2;indels=21;unknowns=0;locus=RLOC_00015523
Chr2	stalkie_big_nohaplotig	exon	22980542	22980712	100	-	.	Parent=FBgn0034501.1.mrna1;Target=FBgn0034501.1 1597 1767 +
Chr2	stalkie_big_nohaplotig	exon	22980785	22981152	99	-	.	Parent=FBgn0034501.1.mrna1;Target=FBgn0034501.1 1229 1596 +
Chr2	stalkie_big_nohaplotig	exon	22981221	22982427	98	-	.	Parent=FBgn0034501.1.mrna1;Target=FBgn0034501.1 1 1228 +
Chr2	stalkie_big_nohaplotig	CDS	22980542	22980712	.	-	0	Parent=FBgn0034501.1.mrna1;Target=FBgn0034501.1 1597 1767 +
Chr2	stalkie_big_nohaplotig	CDS	22980785	22981152	.	-	2	Parent=FBgn0034501.1.mrna1;Target=FBgn0034501.1 1229 1596 +
Chr2	stalkie_big_nohaplotig	CDS	22981221	22982427	.	-	0	Parent=FBgn0034501.1.mrna1;Target=FBgn0034501.1 1 1228 +
Chr2	gffcl	locus	22989112	23010129	.	-	.	ID=RLOC_00015524;geneIDs=comp118665_c0_seq1.path1;transcripts=comp118665_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	22989112	23010129	.	-	.	ID=comp118665_c0_seq1.mrna1;geneID=comp118665_c0_seq1.path1;Name=comp118665_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=614;mismatches=3;indels=0;unknowns=0;Target=comp118665_c0_seq1 298 399 +;locus=RLOC_00015524
Chr2	stalkie_big_nohaplotig	exon	22989112	22989271	100	-	.	Parent=comp118665_c0_seq1.mrna1;Target=comp118665_c0_seq1 458 617 +
Chr2	stalkie_big_nohaplotig	exon	23009673	23010129	99	-	.	Parent=comp118665_c0_seq1.mrna1;Target=comp118665_c0_seq1 1 457 +
Chr2	stalkie_big_nohaplotig	CDS	23009731	23009832	.	-	0	Parent=comp118665_c0_seq1.mrna1
Chr2	gffcl	locus	23012668	23013626	.	-	.	ID=RLOC_00015525;geneIDs=FBgn0051910.1.path1;transcripts=FBgn0051910.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23012668	23013626	.	-	.	ID=FBgn0051910.1.mrna1;geneID=FBgn0051910.1.path1;Name=FBgn0051910.1;Dir=sensecoverage=100.0;identity=99.6;matches=741;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015525
Chr2	stalkie_big_nohaplotig	exon	23012668	23013031	99	-	.	Parent=FBgn0051910.1.mrna1;Target=FBgn0051910.1 381 744 +
Chr2	stalkie_big_nohaplotig	exon	23013100	23013198	98	-	.	Parent=FBgn0051910.1.mrna1;Target=FBgn0051910.1 282 380 +
Chr2	stalkie_big_nohaplotig	exon	23013261	23013505	100	-	.	Parent=FBgn0051910.1.mrna1;Target=FBgn0051910.1 37 281 +
Chr2	stalkie_big_nohaplotig	exon	23013591	23013626	100	-	.	Parent=FBgn0051910.1.mrna1;Target=FBgn0051910.1 1 36 +
Chr2	stalkie_big_nohaplotig	CDS	23012668	23013031	.	-	1	Parent=FBgn0051910.1.mrna1;Target=FBgn0051910.1 381 744 +
Chr2	stalkie_big_nohaplotig	CDS	23013100	23013198	.	-	1	Parent=FBgn0051910.1.mrna1;Target=FBgn0051910.1 282 380 +
Chr2	stalkie_big_nohaplotig	CDS	23013261	23013505	.	-	0	Parent=FBgn0051910.1.mrna1;Target=FBgn0051910.1 37 281 +
Chr2	stalkie_big_nohaplotig	CDS	23013591	23013626	.	-	0	Parent=FBgn0051910.1.mrna1;Target=FBgn0051910.1 1 36 +
Chr2	gffcl	locus	23014790	23015495	.	-	.	ID=RLOC_00015526;geneIDs=comp143225_c0_seq1.path1;transcripts=comp143225_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23014790	23015495	.	-	.	ID=comp143225_c0_seq1.mrna1;geneID=comp143225_c0_seq1.path1;Name=comp143225_c0_seq1;Dir=antisensecoverage=98.8;identity=99.8;matches=641;mismatches=1;indels=0;unknowns=0;Target=comp143225_c0_seq1 474 641 .;locus=RLOC_00015526
Chr2	stalkie_big_nohaplotig	exon	23014790	23014810	100	-	.	Parent=comp143225_c0_seq1.mrna1;Target=comp143225_c0_seq1 1 21 -
Chr2	stalkie_big_nohaplotig	exon	23014875	23015495	99	-	.	Parent=comp143225_c0_seq1.mrna1;Target=comp143225_c0_seq1 22 642 -
Chr2	stalkie_big_nohaplotig	CDS	23015327	23015494	.	-	0	Parent=comp143225_c0_seq1.mrna1
Chr2	gffcl	locus	23015565	23016846	.	+	.	ID=RLOC_00015527;geneIDs=ORF2170.path1,comp147897_c0_seq1.path1;transcripts=ORF2170.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23015565	23016449	.	+	.	ID=ORF2170.mrna1;geneID=ORF2170.path1;Name=ORF2170;Dir=indeterminatecoverage=98.7;identity=96.4;matches=865;mismatches=14;indels=18;unknowns=0;Target=ORF2170 891 1 .;locus=RLOC_00015527
Chr2	stalkie_big_nohaplotig	exon	23015565	23016449	96	+	.	Parent=ORF2170.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23015565	23016449	.	+	0	Parent=ORF2170.mrna1
Chr2	gffcl	locus	23094163	23095045	.	+	.	ID=RLOC_00015528;geneIDs=comp151776_c0_seq1.path1;transcripts=comp151776_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23094163	23095045	.	+	.	ID=comp151776_c0_seq1.mrna1;geneID=comp151776_c0_seq1.path1;Name=comp151776_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=881;mismatches=1;indels=7;unknowns=0;Target=comp151776_c0_seq1 888 1 .;CDS_Target=comp151776_c0_seq1 517 455 .;locus=RLOC_00015528
Chr2	stalkie_big_nohaplotig	exon	23094163	23095045	99	+	.	Parent=comp151776_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23094617	23094679	.	+	0	Parent=comp151776_c0_seq1.mrna1
Chr2	gffcl	locus	23098691	23099998	.	+	.	ID=RLOC_00015529;geneIDs=comp157914_c0_seq1.path1;transcripts=comp157914_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23098691	23099998	.	+	.	ID=comp157914_c0_seq1.mrna1;geneID=comp157914_c0_seq1.path1;Name=comp157914_c0_seq1;Dir=indeterminatecoverage=64.4;identity=98.8;matches=1294;mismatches=12;indels=4;unknowns=0;Target=comp157914_c0_seq1 1308 1 .;CDS_Target=comp157914_c0_seq1 408 274 .;locus=RLOC_00015529
Chr2	stalkie_big_nohaplotig	exon	23098691	23099998	98	+	.	Parent=comp157914_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23098964	23099098	.	+	0	Parent=comp157914_c0_seq1.mrna1
Chr2	gffcl	locus	23100635	23104300	.	-	.	ID=RLOC_00015530;geneIDs=FBgn0015296.1.path1;transcripts=FBgn0015296.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23100635	23104300	.	-	.	ID=FBgn0015296.1.mrna1;geneID=FBgn0015296.1.path1;Name=FBgn0015296.1;Dir=sensecoverage=100.0;identity=99.8;matches=1282;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015530
Chr2	stalkie_big_nohaplotig	exon	23100635	23101005	100	-	.	Parent=FBgn0015296.1.mrna1;Target=FBgn0015296.1 914 1284 +
Chr2	stalkie_big_nohaplotig	exon	23102583	23102917	99	-	.	Parent=FBgn0015296.1.mrna1;Target=FBgn0015296.1 579 913 +
Chr2	stalkie_big_nohaplotig	exon	23102989	23103140	100	-	.	Parent=FBgn0015296.1.mrna1;Target=FBgn0015296.1 427 578 +
Chr2	stalkie_big_nohaplotig	exon	23103243	23103474	100	-	.	Parent=FBgn0015296.1.mrna1;Target=FBgn0015296.1 195 426 +
Chr2	stalkie_big_nohaplotig	exon	23103676	23103746	100	-	.	Parent=FBgn0015296.1.mrna1;Target=FBgn0015296.1 124 194 +
Chr2	stalkie_big_nohaplotig	exon	23104178	23104300	100	-	.	Parent=FBgn0015296.1.mrna1;Target=FBgn0015296.1 1 123 +
Chr2	stalkie_big_nohaplotig	CDS	23100635	23101005	.	-	2	Parent=FBgn0015296.1.mrna1;Target=FBgn0015296.1 914 1284 +
Chr2	stalkie_big_nohaplotig	CDS	23102583	23102917	.	-	1	Parent=FBgn0015296.1.mrna1;Target=FBgn0015296.1 579 913 +
Chr2	stalkie_big_nohaplotig	CDS	23102989	23103140	.	-	0	Parent=FBgn0015296.1.mrna1;Target=FBgn0015296.1 427 578 +
Chr2	stalkie_big_nohaplotig	CDS	23103243	23103474	.	-	1	Parent=FBgn0015296.1.mrna1;Target=FBgn0015296.1 195 426 +
Chr2	stalkie_big_nohaplotig	CDS	23103676	23103746	.	-	0	Parent=FBgn0015296.1.mrna1;Target=FBgn0015296.1 124 194 +
Chr2	stalkie_big_nohaplotig	CDS	23104178	23104300	.	-	0	Parent=FBgn0015296.1.mrna1;Target=FBgn0015296.1 1 123 +
Chr2	gffcl	locus	23116886	23117239	.	+	.	ID=RLOC_00015531;geneIDs=comp153631_c0_seq1.path1;transcripts=comp153631_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23116886	23117239	.	+	.	ID=comp153631_c0_seq1.mrna1;geneID=comp153631_c0_seq1.path1;Name=comp153631_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=347;mismatches=7;indels=2;unknowns=0;Target=comp153631_c0_seq1 356 1 .;CDS_Target=comp153631_c0_seq1 347 219 .;locus=RLOC_00015531
Chr2	stalkie_big_nohaplotig	exon	23116886	23117239	97	+	.	Parent=comp153631_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23117102	23117230	.	+	0	Parent=comp153631_c0_seq1.mrna1
Chr2	gffcl	locus	23122286	23123121	.	+	.	ID=RLOC_00015532;geneIDs=ORF3082.path1;transcripts=ORF3082.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23122286	23123121	.	+	.	ID=ORF3082.mrna1;geneID=ORF3082.path1;Name=ORF3082;Dir=sensecoverage=100.0;identity=99.9;matches=770;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015532
Chr2	stalkie_big_nohaplotig	exon	23122286	23122756	100	+	.	Parent=ORF3082.mrna1;Target=ORF3082 1 471 +
Chr2	stalkie_big_nohaplotig	exon	23122822	23123121	99	+	.	Parent=ORF3082.mrna1;Target=ORF3082 472 771 +
Chr2	stalkie_big_nohaplotig	CDS	23122286	23122756	.	+	0	Parent=ORF3082.mrna1;Target=ORF3082 1 471 +
Chr2	stalkie_big_nohaplotig	CDS	23122822	23123121	.	+	0	Parent=ORF3082.mrna1;Target=ORF3082 472 771 +
Chr2	gffcl	locus	23127072	23132662	.	-	.	ID=RLOC_00015533;geneIDs=FBgn0027529.1.path1,comp411852_c0_seq1.path1;transcripts=FBgn0027529.1.mrna1,comp411852_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23127072	23132662	.	-	.	ID=FBgn0027529.1.mrna1;geneID=FBgn0027529.1.path1;Name=FBgn0027529.1;Dir=sensecoverage=92.6;identity=99.9;matches=3378;mismatches=4;indels=0;unknowns=0;locus=RLOC_00015533
Chr2	stalkie_big_nohaplotig	exon	23127072	23127167	100	-	.	Parent=FBgn0027529.1.mrna1;Target=FBgn0027529.1 3557 3652 +
Chr2	stalkie_big_nohaplotig	exon	23128334	23128485	100	-	.	Parent=FBgn0027529.1.mrna1;Target=FBgn0027529.1 3405 3556 +
Chr2	stalkie_big_nohaplotig	exon	23128544	23128692	100	-	.	Parent=FBgn0027529.1.mrna1;Target=FBgn0027529.1 3256 3404 +
Chr2	stalkie_big_nohaplotig	exon	23128753	23128996	100	-	.	Parent=FBgn0027529.1.mrna1;Target=FBgn0027529.1 3012 3255 +
Chr2	stalkie_big_nohaplotig	exon	23129132	23129250	100	-	.	Parent=FBgn0027529.1.mrna1;Target=FBgn0027529.1 2893 3011 +
Chr2	stalkie_big_nohaplotig	exon	23129315	23129725	100	-	.	Parent=FBgn0027529.1.mrna1;Target=FBgn0027529.1 2482 2892 +
Chr2	stalkie_big_nohaplotig	exon	23130318	23131078	100	-	.	Parent=FBgn0027529.1.mrna1;Target=FBgn0027529.1 1721 2481 +
Chr2	stalkie_big_nohaplotig	exon	23131144	23131621	99	-	.	Parent=FBgn0027529.1.mrna1;Target=FBgn0027529.1 1243 1720 +
Chr2	stalkie_big_nohaplotig	exon	23131691	23132662	99	-	.	Parent=FBgn0027529.1.mrna1;Target=FBgn0027529.1 271 1242 +
Chr2	stalkie_big_nohaplotig	CDS	23127073	23127167	.	-	2	Parent=FBgn0027529.1.mrna1;Target=FBgn0027529.1 3557 3651 +
Chr2	stalkie_big_nohaplotig	CDS	23128334	23128485	.	-	1	Parent=FBgn0027529.1.mrna1;Target=FBgn0027529.1 3405 3556 +
Chr2	stalkie_big_nohaplotig	CDS	23128544	23128692	.	-	0	Parent=FBgn0027529.1.mrna1;Target=FBgn0027529.1 3256 3404 +
Chr2	stalkie_big_nohaplotig	CDS	23128753	23128996	.	-	1	Parent=FBgn0027529.1.mrna1;Target=FBgn0027529.1 3012 3255 +
Chr2	stalkie_big_nohaplotig	CDS	23129132	23129250	.	-	0	Parent=FBgn0027529.1.mrna1;Target=FBgn0027529.1 2893 3011 +
Chr2	stalkie_big_nohaplotig	CDS	23129315	23129725	.	-	0	Parent=FBgn0027529.1.mrna1;Target=FBgn0027529.1 2482 2892 +
Chr2	stalkie_big_nohaplotig	CDS	23130318	23131078	.	-	2	Parent=FBgn0027529.1.mrna1;Target=FBgn0027529.1 1721 2481 +
Chr2	stalkie_big_nohaplotig	CDS	23131144	23131621	.	-	0	Parent=FBgn0027529.1.mrna1;Target=FBgn0027529.1 1243 1720 +
Chr2	stalkie_big_nohaplotig	CDS	23131691	23132662	.	-	0	Parent=FBgn0027529.1.mrna1;Target=FBgn0027529.1 271 1242 +
Chr2	stalkie_big_nohaplotig	mRNA	23127145	23127615	.	-	.	ID=comp411852_c0_seq1.mrna1;geneID=comp411852_c0_seq1.path1;Name=comp411852_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=470;mismatches=1;indels=2;unknowns=0;Target=comp411852_c0_seq1 473 1 .;CDS_Target=comp411852_c0_seq1 251 102 .;locus=RLOC_00015533
Chr2	stalkie_big_nohaplotig	exon	23127145	23127615	99	-	.	Parent=comp411852_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23127365	23127514	.	-	0	Parent=comp411852_c0_seq1.mrna1
Chr2	gffcl	locus	23127690	23128064	.	-	.	ID=RLOC_00015534;geneIDs=comp441598_c0_seq1.path1;transcripts=comp441598_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23127690	23128064	.	-	.	ID=comp441598_c0_seq1.mrna1;geneID=comp441598_c0_seq1.path1;Name=comp441598_c0_seq1;Dir=indeterminatecoverage=97.7;identity=99.7;matches=374;mismatches=1;indels=0;unknowns=0;Target=comp441598_c0_seq1 384 10 .;CDS_Target=comp441598_c0_seq1 171 67 .;locus=RLOC_00015534
Chr2	stalkie_big_nohaplotig	exon	23127690	23128064	99	-	.	Parent=comp441598_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23127903	23128007	.	-	0	Parent=comp441598_c0_seq1.mrna1
Chr2	gffcl	locus	23135311	23135917	.	+	.	ID=RLOC_00015535;geneIDs=comp146945_c0_seq1.path1;transcripts=comp146945_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23135311	23135917	.	+	.	ID=comp146945_c0_seq1.mrna1;geneID=comp146945_c0_seq1.path1;Name=comp146945_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=592;mismatches=15;indels=0;unknowns=0;Target=comp146945_c0_seq1 607 1 .;CDS_Target=comp146945_c0_seq1 160 2 .;locus=RLOC_00015535
Chr2	stalkie_big_nohaplotig	exon	23135311	23135917	97	+	.	Parent=comp146945_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23135312	23135470	.	+	0	Parent=comp146945_c0_seq1.mrna1
Chr2	gffcl	locus	23155123	23166436	.	+	.	ID=RLOC_00015537;geneIDs=comp155338_c0_seq1.path1;transcripts=comp155338_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23155123	23166436	.	+	.	ID=comp155338_c0_seq1.mrna1;geneID=comp155338_c0_seq1.path1;Name=comp155338_c0_seq1;Dir=antisensecoverage=56.5;identity=99.2;matches=899;mismatches=2;indels=5;unknowns=0;Target=comp155338_c0_seq1 696 965 .;locus=RLOC_00015537
Chr2	stalkie_big_nohaplotig	exon	23155123	23155289	100	+	.	Parent=comp155338_c0_seq1.mrna1;Target=comp155338_c0_seq1 1428 1594 -
Chr2	stalkie_big_nohaplotig	exon	23165698	23166436	99	+	.	Parent=comp155338_c0_seq1.mrna1;Target=comp155338_c0_seq1 694 1427 -
Chr2	stalkie_big_nohaplotig	CDS	23166165	23166434	.	+	0	Parent=comp155338_c0_seq1.mrna1
Chr2	gffcl	locus	23172814	23173210	.	-	.	ID=RLOC_00015539;geneIDs=comp116928_c0_seq1.path1;transcripts=comp116928_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23172814	23173210	.	-	.	ID=comp116928_c0_seq1.mrna1;geneID=comp116928_c0_seq1.path1;Name=comp116928_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=397;mismatches=0;indels=0;unknowns=0;Target=comp116928_c0_seq1 398 2 .;CDS_Target=comp116928_c0_seq1 298 182 .;locus=RLOC_00015539
Chr2	stalkie_big_nohaplotig	exon	23172814	23173210	100	-	.	Parent=comp116928_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23172914	23173030	.	-	0	Parent=comp116928_c0_seq1.mrna1
Chr2	gffcl	locus	23176404	23176843	.	+	.	ID=RLOC_00015540;geneIDs=FBgn0010638.1.path1;transcripts=FBgn0010638.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23176404	23176843	.	+	.	ID=FBgn0010638.1.mrna1;geneID=FBgn0010638.1.path1;Name=FBgn0010638.1;Dir=sensecoverage=100.0;identity=100.0;matches=309;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015540
Chr2	stalkie_big_nohaplotig	exon	23176404	23176418	100	+	.	Parent=FBgn0010638.1.mrna1;Target=FBgn0010638.1 1 15 +
Chr2	stalkie_big_nohaplotig	exon	23176485	23176693	100	+	.	Parent=FBgn0010638.1.mrna1;Target=FBgn0010638.1 16 224 +
Chr2	stalkie_big_nohaplotig	exon	23176759	23176843	100	+	.	Parent=FBgn0010638.1.mrna1;Target=FBgn0010638.1 225 309 +
Chr2	stalkie_big_nohaplotig	CDS	23176404	23176418	.	+	0	Parent=FBgn0010638.1.mrna1;Target=FBgn0010638.1 1 15 +
Chr2	stalkie_big_nohaplotig	CDS	23176485	23176693	.	+	0	Parent=FBgn0010638.1.mrna1;Target=FBgn0010638.1 16 224 +
Chr2	stalkie_big_nohaplotig	CDS	23176759	23176843	.	+	1	Parent=FBgn0010638.1.mrna1;Target=FBgn0010638.1 225 309 +
Chr2	gffcl	locus	23177227	23186869	.	-	.	ID=RLOC_00015541;geneIDs=FBgn0053286.1.path1;transcripts=FBgn0053286.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23177227	23186869	.	-	.	ID=FBgn0053286.1.mrna1;geneID=FBgn0053286.1.path1;Name=FBgn0053286.1;Dir=sensecoverage=99.9;identity=99.4;matches=3506;mismatches=20;indels=1;unknowns=0;Target=FBgn0053286.1 6 17 +;locus=RLOC_00015541
Chr2	stalkie_big_nohaplotig	exon	23177227	23177355	100	-	.	Parent=FBgn0053286.1.mrna1;Target=FBgn0053286.1 3403 3531 +
Chr2	stalkie_big_nohaplotig	exon	23177428	23177708	98	-	.	Parent=FBgn0053286.1.mrna1;Target=FBgn0053286.1 3122 3402 +
Chr2	stalkie_big_nohaplotig	exon	23177790	23177850	100	-	.	Parent=FBgn0053286.1.mrna1;Target=FBgn0053286.1 3061 3121 +
Chr2	stalkie_big_nohaplotig	exon	23177920	23178091	99	-	.	Parent=FBgn0053286.1.mrna1;Target=FBgn0053286.1 2889 3060 +
Chr2	stalkie_big_nohaplotig	exon	23178621	23178696	100	-	.	Parent=FBgn0053286.1.mrna1;Target=FBgn0053286.1 2813 2888 +
Chr2	stalkie_big_nohaplotig	exon	23179633	23181079	99	-	.	Parent=FBgn0053286.1.mrna1;Target=FBgn0053286.1 1366 2812 +
Chr2	stalkie_big_nohaplotig	exon	23181741	23181969	100	-	.	Parent=FBgn0053286.1.mrna1;Target=FBgn0053286.1 1137 1365 +
Chr2	stalkie_big_nohaplotig	exon	23182408	23182513	99	-	.	Parent=FBgn0053286.1.mrna1;Target=FBgn0053286.1 1031 1136 +
Chr2	stalkie_big_nohaplotig	exon	23183644	23183816	100	-	.	Parent=FBgn0053286.1.mrna1;Target=FBgn0053286.1 858 1030 +
Chr2	stalkie_big_nohaplotig	exon	23183881	23183985	100	-	.	Parent=FBgn0053286.1.mrna1;Target=FBgn0053286.1 753 857 +
Chr2	stalkie_big_nohaplotig	exon	23184056	23184141	100	-	.	Parent=FBgn0053286.1.mrna1;Target=FBgn0053286.1 667 752 +
Chr2	stalkie_big_nohaplotig	exon	23184195	23184278	100	-	.	Parent=FBgn0053286.1.mrna1;Target=FBgn0053286.1 583 666 +
Chr2	stalkie_big_nohaplotig	exon	23184360	23184614	100	-	.	Parent=FBgn0053286.1.mrna1;Target=FBgn0053286.1 328 582 +
Chr2	stalkie_big_nohaplotig	exon	23184668	23184720	100	-	.	Parent=FBgn0053286.1.mrna1;Target=FBgn0053286.1 275 327 +
Chr2	stalkie_big_nohaplotig	exon	23186601	23186869	97	-	.	Parent=FBgn0053286.1.mrna1;Target=FBgn0053286.1 5 274 +
Chr2	stalkie_big_nohaplotig	CDS	23186858	23186868	.	-	0	Parent=FBgn0053286.1.mrna1
Chr2	gffcl	locus	23188890	23189307	.	+	.	ID=RLOC_00015542;geneIDs=comp146072_c0_seq1.path1;transcripts=comp146072_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23188890	23189307	.	+	.	ID=comp146072_c0_seq1.mrna1;geneID=comp146072_c0_seq1.path1;Name=comp146072_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=417;mismatches=1;indels=3;unknowns=0;Target=comp146072_c0_seq1 421 1 .;CDS_Target=comp146072_c0_seq1 145 41 .;locus=RLOC_00015542
Chr2	stalkie_big_nohaplotig	exon	23188890	23189307	99	+	.	Parent=comp146072_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23188930	23189034	.	+	0	Parent=comp146072_c0_seq1.mrna1
Chr2	gffcl	locus	23201653	23209661	.	-	.	ID=RLOC_00015544;geneIDs=FBgn0263113.path1;transcripts=FBgn0263113.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23201653	23209661	.	-	.	ID=FBgn0263113.mrna1;geneID=FBgn0263113.path1;Name=FBgn0263113;Dir=sensecoverage=100.0;identity=99.5;matches=2194;mismatches=11;indels=0;unknowns=0;locus=RLOC_00015544
Chr2	stalkie_big_nohaplotig	exon	23201653	23201847	100	-	.	Parent=FBgn0263113.mrna1;Target=FBgn0263113 2011 2205 +
Chr2	stalkie_big_nohaplotig	exon	23201902	23202369	99	-	.	Parent=FBgn0263113.mrna1;Target=FBgn0263113 1543 2010 +
Chr2	stalkie_big_nohaplotig	exon	23203030	23203207	98	-	.	Parent=FBgn0263113.mrna1;Target=FBgn0263113 1365 1542 +
Chr2	stalkie_big_nohaplotig	exon	23203270	23203390	100	-	.	Parent=FBgn0263113.mrna1;Target=FBgn0263113 1244 1364 +
Chr2	stalkie_big_nohaplotig	exon	23203453	23203688	100	-	.	Parent=FBgn0263113.mrna1;Target=FBgn0263113 1008 1243 +
Chr2	stalkie_big_nohaplotig	exon	23203775	23204445	99	-	.	Parent=FBgn0263113.mrna1;Target=FBgn0263113 337 1007 +
Chr2	stalkie_big_nohaplotig	exon	23209326	23209661	98	-	.	Parent=FBgn0263113.mrna1;Target=FBgn0263113 1 336 +
Chr2	stalkie_big_nohaplotig	CDS	23201653	23201847	.	-	0	Parent=FBgn0263113.mrna1;Target=FBgn0263113 2011 2205 +
Chr2	stalkie_big_nohaplotig	CDS	23201902	23202369	.	-	0	Parent=FBgn0263113.mrna1;Target=FBgn0263113 1543 2010 +
Chr2	stalkie_big_nohaplotig	CDS	23203030	23203207	.	-	1	Parent=FBgn0263113.mrna1;Target=FBgn0263113 1365 1542 +
Chr2	stalkie_big_nohaplotig	CDS	23203270	23203390	.	-	2	Parent=FBgn0263113.mrna1;Target=FBgn0263113 1244 1364 +
Chr2	stalkie_big_nohaplotig	CDS	23203453	23203688	.	-	1	Parent=FBgn0263113.mrna1;Target=FBgn0263113 1008 1243 +
Chr2	stalkie_big_nohaplotig	CDS	23203775	23204445	.	-	0	Parent=FBgn0263113.mrna1;Target=FBgn0263113 337 1007 +
Chr2	stalkie_big_nohaplotig	CDS	23209326	23209661	.	-	0	Parent=FBgn0263113.mrna1;Target=FBgn0263113 1 336 +
Chr2	gffcl	locus	23213015	23214954	.	+	.	ID=RLOC_00015545;geneIDs=comp158465_c0_seq1.path1;transcripts=comp158465_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23213015	23214954	.	+	.	ID=comp158465_c0_seq1.mrna1;geneID=comp158465_c0_seq1.path1;Name=comp158465_c0_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=936;mismatches=6;indels=1;unknowns=0;locus=RLOC_00015545
Chr2	stalkie_big_nohaplotig	exon	23213015	23213088	100	+	.	Parent=comp158465_c0_seq1.mrna1;Target=comp158465_c0_seq1 870 943 -
Chr2	stalkie_big_nohaplotig	exon	23213159	23213294	100	+	.	Parent=comp158465_c0_seq1.mrna1;Target=comp158465_c0_seq1 734 869 -
Chr2	stalkie_big_nohaplotig	exon	23214223	23214954	99	+	.	Parent=comp158465_c0_seq1.mrna1;Target=comp158465_c0_seq1 1 733 -
Chr2	stalkie_big_nohaplotig	CDS	23213162	23213294	.	+	0	Parent=comp158465_c0_seq1.mrna1;Target=comp158465_c0_seq1 734 866 .
Chr2	stalkie_big_nohaplotig	CDS	23214223	23214788	.	+	2	Parent=comp158465_c0_seq1.mrna1;Target=comp158465_c0_seq1 168 733 .
Chr2	gffcl	locus	23216917	23219304	.	-	.	ID=RLOC_00015546;geneIDs=FBgn0034237.1.path1;transcripts=FBgn0034237.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23216917	23219304	.	-	.	ID=FBgn0034237.1.mrna1;geneID=FBgn0034237.1.path1;Name=FBgn0034237.1;Dir=sensecoverage=100.0;identity=99.8;matches=2075;mismatches=4;indels=0;unknowns=0;locus=RLOC_00015546
Chr2	stalkie_big_nohaplotig	exon	23216917	23217002	100	-	.	Parent=FBgn0034237.1.mrna1;Target=FBgn0034237.1 1994 2079 +
Chr2	stalkie_big_nohaplotig	exon	23217069	23218621	99	-	.	Parent=FBgn0034237.1.mrna1;Target=FBgn0034237.1 441 1993 +
Chr2	stalkie_big_nohaplotig	exon	23218686	23219001	99	-	.	Parent=FBgn0034237.1.mrna1;Target=FBgn0034237.1 125 440 +
Chr2	stalkie_big_nohaplotig	exon	23219181	23219304	100	-	.	Parent=FBgn0034237.1.mrna1;Target=FBgn0034237.1 1 124 +
Chr2	stalkie_big_nohaplotig	CDS	23216917	23217002	.	-	2	Parent=FBgn0034237.1.mrna1;Target=FBgn0034237.1 1994 2079 +
Chr2	stalkie_big_nohaplotig	CDS	23217069	23218621	.	-	1	Parent=FBgn0034237.1.mrna1;Target=FBgn0034237.1 441 1993 +
Chr2	stalkie_big_nohaplotig	CDS	23218686	23219001	.	-	2	Parent=FBgn0034237.1.mrna1;Target=FBgn0034237.1 125 440 +
Chr2	stalkie_big_nohaplotig	CDS	23219181	23219304	.	-	0	Parent=FBgn0034237.1.mrna1;Target=FBgn0034237.1 1 124 +
Chr2	gffcl	locus	23234155	23256364	.	-	.	ID=RLOC_00015547;geneIDs=comp153467_c0_seq1.path1;transcripts=comp153467_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23234155	23256364	.	-	.	ID=comp153467_c0_seq1.mrna1;geneID=comp153467_c0_seq1.path1;Name=comp153467_c0_seq1;Dir=indeterminatecoverage=92.2;identity=98.0;matches=547;mismatches=11;indels=0;unknowns=0;Target=comp153467_c0_seq1 243 97 .;locus=RLOC_00015547
Chr2	stalkie_big_nohaplotig	exon	23234155	23234162	75	-	.	Parent=comp153467_c0_seq1.mrna1;Target=comp153467_c0_seq1 558 551 .
Chr2	stalkie_big_nohaplotig	exon	23235108	23235117	90	-	.	Parent=comp153467_c0_seq1.mrna1;Target=comp153467_c0_seq1 550 541 .
Chr2	stalkie_big_nohaplotig	exon	23236979	23236986	100	-	.	Parent=comp153467_c0_seq1.mrna1;Target=comp153467_c0_seq1 540 533 .
Chr2	stalkie_big_nohaplotig	exon	23239882	23239887	100	-	.	Parent=comp153467_c0_seq1.mrna1;Target=comp153467_c0_seq1 532 527 .
Chr2	stalkie_big_nohaplotig	exon	23243822	23243826	100	-	.	Parent=comp153467_c0_seq1.mrna1;Target=comp153467_c0_seq1 526 522 .
Chr2	stalkie_big_nohaplotig	exon	23246500	23246507	100	-	.	Parent=comp153467_c0_seq1.mrna1;Target=comp153467_c0_seq1 521 514 .
Chr2	stalkie_big_nohaplotig	exon	23254670	23254673	100	-	.	Parent=comp153467_c0_seq1.mrna1;Target=comp153467_c0_seq1 513 510 .
Chr2	stalkie_big_nohaplotig	exon	23255266	23255275	100	-	.	Parent=comp153467_c0_seq1.mrna1;Target=comp153467_c0_seq1 509 500 .
Chr2	stalkie_big_nohaplotig	exon	23255504	23255505	100	-	.	Parent=comp153467_c0_seq1.mrna1;Target=comp153467_c0_seq1 499 498 .
Chr2	stalkie_big_nohaplotig	exon	23255868	23256364	98	-	.	Parent=comp153467_c0_seq1.mrna1;Target=comp153467_c0_seq1 497 1 .
Chr2	stalkie_big_nohaplotig	CDS	23256122	23256268	.	-	0	Parent=comp153467_c0_seq1.mrna1
Chr2	gffcl	locus	23258310	23258589	.	+	.	ID=RLOC_00015548;geneIDs=comp46428_c0_seq1.path1;transcripts=comp46428_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23258310	23258589	.	+	.	ID=comp46428_c0_seq1.mrna1;geneID=comp46428_c0_seq1.path1;Name=comp46428_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.6;matches=279;mismatches=1;indels=0;unknowns=0;Target=comp46428_c0_seq1 282 3 .;CDS_Target=comp46428_c0_seq1 65 3 .;locus=RLOC_00015548
Chr2	stalkie_big_nohaplotig	exon	23258310	23258589	99	+	.	Parent=comp46428_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23258310	23258372	.	+	0	Parent=comp46428_c0_seq1.mrna1
Chr2	gffcl	locus	23260938	23261715	.	+	.	ID=RLOC_00015549;geneIDs=FBgn0012042.2.path1;transcripts=FBgn0012042.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23260938	23261715	.	+	.	ID=FBgn0012042.2.mrna1;geneID=FBgn0012042.2.path1;Name=FBgn0012042.2;Dir=sensecoverage=100.0;identity=99.0;matches=710;mismatches=7;indels=0;unknowns=0;locus=RLOC_00015549
Chr2	stalkie_big_nohaplotig	exon	23260938	23261254	99	+	.	Parent=FBgn0012042.2.mrna1;Target=FBgn0012042.2 1 317 +
Chr2	stalkie_big_nohaplotig	exon	23261316	23261715	99	+	.	Parent=FBgn0012042.2.mrna1;Target=FBgn0012042.2 318 717 +
Chr2	stalkie_big_nohaplotig	CDS	23260938	23261254	.	+	0	Parent=FBgn0012042.2.mrna1;Target=FBgn0012042.2 1 317 +
Chr2	stalkie_big_nohaplotig	CDS	23261316	23261715	.	+	1	Parent=FBgn0012042.2.mrna1;Target=FBgn0012042.2 318 717 +
Chr2	gffcl	locus	23264149	23265337	.	+	.	ID=RLOC_00015550;geneIDs=FBgn0038681.1.path1;transcripts=FBgn0038681.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23264149	23265337	.	+	.	ID=FBgn0038681.1.mrna1;geneID=FBgn0038681.1.path1;Name=FBgn0038681.1;Dir=sensecoverage=100.0;identity=100.0;matches=1074;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015550
Chr2	stalkie_big_nohaplotig	exon	23264149	23264186	100	+	.	Parent=FBgn0038681.1.mrna1;Target=FBgn0038681.1 1 38 +
Chr2	stalkie_big_nohaplotig	exon	23264244	23264691	100	+	.	Parent=FBgn0038681.1.mrna1;Target=FBgn0038681.1 39 486 +
Chr2	stalkie_big_nohaplotig	exon	23264750	23265337	100	+	.	Parent=FBgn0038681.1.mrna1;Target=FBgn0038681.1 487 1074 +
Chr2	stalkie_big_nohaplotig	CDS	23264149	23264186	.	+	0	Parent=FBgn0038681.1.mrna1;Target=FBgn0038681.1 1 38 +
Chr2	stalkie_big_nohaplotig	CDS	23264244	23264691	.	+	1	Parent=FBgn0038681.1.mrna1;Target=FBgn0038681.1 39 486 +
Chr2	stalkie_big_nohaplotig	CDS	23264750	23265337	.	+	0	Parent=FBgn0038681.1.mrna1;Target=FBgn0038681.1 487 1074 +
Chr2	gffcl	locus	23267379	23269732	.	.	.	ID=RLOC_00015551;geneIDs=FBgn0033962.1.path1,comp154855_c1_seq1.path1;transcripts=FBgn0033962.1.mrna1,comp154855_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23267379	23269732	.	+	.	ID=FBgn0033962.1.mrna1;geneID=FBgn0033962.1.path1;Name=FBgn0033962.1;Dir=sensecoverage=100.0;identity=99.8;matches=626;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015551
Chr2	stalkie_big_nohaplotig	exon	23267379	23267599	100	+	.	Parent=FBgn0033962.1.mrna1;Target=FBgn0033962.1 1 221 +
Chr2	stalkie_big_nohaplotig	exon	23267672	23267981	100	+	.	Parent=FBgn0033962.1.mrna1;Target=FBgn0033962.1 222 531 +
Chr2	stalkie_big_nohaplotig	exon	23269637	23269732	98	+	.	Parent=FBgn0033962.1.mrna1;Target=FBgn0033962.1 532 627 +
Chr2	stalkie_big_nohaplotig	CDS	23267379	23267599	.	+	0	Parent=FBgn0033962.1.mrna1;Target=FBgn0033962.1 1 221 +
Chr2	stalkie_big_nohaplotig	CDS	23267672	23267981	.	+	1	Parent=FBgn0033962.1.mrna1;Target=FBgn0033962.1 222 531 +
Chr2	stalkie_big_nohaplotig	CDS	23269637	23269732	.	+	0	Parent=FBgn0033962.1.mrna1;Target=FBgn0033962.1 532 627 +
Chr2	stalkie_big_nohaplotig	mRNA	23267958	23269339	.	-	.	ID=comp154855_c1_seq1.mrna1;geneID=comp154855_c1_seq1.path1;Name=comp154855_c1_seq1;Dir=indeterminatecoverage=99.5;identity=95.1;matches=1326;mismatches=12;indels=56;unknowns=0;Target=comp154855_c1_seq1 1357 8 .;CDS_Target=comp154855_c1_seq1 425 285 .;locus=RLOC_00015551
Chr2	stalkie_big_nohaplotig	exon	23267958	23269339	95	-	.	Parent=comp154855_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23268890	23269030	.	-	0	Parent=comp154855_c1_seq1.mrna1
Chr2	gffcl	locus	23269875	23270353	.	-	.	ID=RLOC_00015552;geneIDs=FBgn0033961.1.path1;transcripts=FBgn0033961.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23269875	23270353	.	-	.	ID=FBgn0033961.1.mrna1;geneID=FBgn0033961.1.path1;Name=FBgn0033961.1;Dir=sensecoverage=100.0;identity=100.0;matches=408;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015552
Chr2	stalkie_big_nohaplotig	exon	23269875	23270084	100	-	.	Parent=FBgn0033961.1.mrna1;Target=FBgn0033961.1 199 408 +
Chr2	stalkie_big_nohaplotig	exon	23270156	23270353	100	-	.	Parent=FBgn0033961.1.mrna1;Target=FBgn0033961.1 1 198 +
Chr2	stalkie_big_nohaplotig	CDS	23269875	23270084	.	-	0	Parent=FBgn0033961.1.mrna1;Target=FBgn0033961.1 199 408 +
Chr2	stalkie_big_nohaplotig	CDS	23270156	23270353	.	-	0	Parent=FBgn0033961.1.mrna1;Target=FBgn0033961.1 1 198 +
Chr2	gffcl	locus	23274574	23275638	.	-	.	ID=RLOC_00015553;geneIDs=ORF1549.path1;transcripts=ORF1549.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23274574	23275638	.	-	.	ID=ORF1549.mrna1;geneID=ORF1549.path1;Name=ORF1549;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1065;mismatches=0;indels=0;unknowns=0;Target=ORF1549 1065 1 .;locus=RLOC_00015553
Chr2	stalkie_big_nohaplotig	exon	23274574	23275638	100	-	.	Parent=ORF1549.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23274574	23275638	.	-	0	Parent=ORF1549.mrna1
Chr2	gffcl	locus	23288511	23290345	.	-	.	ID=RLOC_00015556;geneIDs=FBgn0050476.1.path1;transcripts=FBgn0050476.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23288511	23290345	.	-	.	ID=FBgn0050476.1.mrna1;geneID=FBgn0050476.1.path1;Name=FBgn0050476.1;Dir=sensecoverage=100.0;identity=100.0;matches=330;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015556
Chr2	stalkie_big_nohaplotig	exon	23288511	23288678	100	-	.	Parent=FBgn0050476.1.mrna1;Target=FBgn0050476.1 163 330 +
Chr2	stalkie_big_nohaplotig	exon	23290184	23290345	100	-	.	Parent=FBgn0050476.1.mrna1;Target=FBgn0050476.1 1 162 +
Chr2	stalkie_big_nohaplotig	CDS	23288511	23288678	.	-	0	Parent=FBgn0050476.1.mrna1;Target=FBgn0050476.1 163 330 +
Chr2	stalkie_big_nohaplotig	CDS	23290184	23290345	.	-	0	Parent=FBgn0050476.1.mrna1;Target=FBgn0050476.1 1 162 +
Chr2	gffcl	locus	23292603	23298664	.	+	.	ID=RLOC_00015557;geneIDs=FBgn0028689.1.path1;transcripts=FBgn0028689.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23292603	23298664	.	+	.	ID=FBgn0028689.1.mrna1;geneID=FBgn0028689.1.path1;Name=FBgn0028689.1;Dir=sensecoverage=100.0;identity=99.8;matches=1293;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015557
Chr2	stalkie_big_nohaplotig	exon	23292603	23292950	99	+	.	Parent=FBgn0028689.1.mrna1;Target=FBgn0028689.1 1 348 +
Chr2	stalkie_big_nohaplotig	exon	23293010	23293516	99	+	.	Parent=FBgn0028689.1.mrna1;Target=FBgn0028689.1 349 855 +
Chr2	stalkie_big_nohaplotig	exon	23293573	23293785	100	+	.	Parent=FBgn0028689.1.mrna1;Target=FBgn0028689.1 856 1068 +
Chr2	stalkie_big_nohaplotig	exon	23298437	23298664	100	+	.	Parent=FBgn0028689.1.mrna1;Target=FBgn0028689.1 1069 1296 +
Chr2	stalkie_big_nohaplotig	CDS	23292603	23292950	.	+	0	Parent=FBgn0028689.1.mrna1;Target=FBgn0028689.1 1 348 +
Chr2	stalkie_big_nohaplotig	CDS	23293010	23293516	.	+	0	Parent=FBgn0028689.1.mrna1;Target=FBgn0028689.1 349 855 +
Chr2	stalkie_big_nohaplotig	CDS	23293573	23293785	.	+	0	Parent=FBgn0028689.1.mrna1;Target=FBgn0028689.1 856 1068 +
Chr2	stalkie_big_nohaplotig	CDS	23298437	23298664	.	+	0	Parent=FBgn0028689.1.mrna1;Target=FBgn0028689.1 1069 1296 +
Chr2	gffcl	locus	23324864	23325641	.	-	.	ID=RLOC_00015558;geneIDs=FBgn0012042.3.path1;transcripts=FBgn0012042.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23324864	23325641	.	-	.	ID=FBgn0012042.3.mrna1;geneID=FBgn0012042.3.path1;Name=FBgn0012042.3;Dir=sensecoverage=99.0;identity=99.3;matches=705;mismatches=5;indels=0;unknowns=0;locus=RLOC_00015558
Chr2	stalkie_big_nohaplotig	exon	23324864	23325263	100	-	.	Parent=FBgn0012042.3.mrna1;Target=FBgn0012042.3 318 717 +
Chr2	stalkie_big_nohaplotig	exon	23325332	23325641	98	-	.	Parent=FBgn0012042.3.mrna1;Target=FBgn0012042.3 8 317 +
Chr2	stalkie_big_nohaplotig	CDS	23324864	23325263	.	-	1	Parent=FBgn0012042.3.mrna1;Target=FBgn0012042.3 318 717 +
Chr2	stalkie_big_nohaplotig	CDS	23325332	23325639	.	-	0	Parent=FBgn0012042.3.mrna1;Target=FBgn0012042.3 10 317 +
Chr2	gffcl	locus	23347363	23351673	.	+	.	ID=RLOC_00015559;geneIDs=FBgn0033958.1.path2;transcripts=FBgn0033958.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	23347363	23351673	.	+	.	ID=FBgn0033958.1.mrna2;geneID=FBgn0033958.1.path2;Name=FBgn0033958.1;Dir=sensecoverage=99.2;identity=99.5;matches=1948;mismatches=10;indels=0;unknowns=0;locus=RLOC_00015559
Chr2	stalkie_big_nohaplotig	exon	23347363	23347531	100	+	.	Parent=FBgn0033958.1.mrna2;Target=FBgn0033958.1 17 185 +
Chr2	stalkie_big_nohaplotig	exon	23347587	23347862	100	+	.	Parent=FBgn0033958.1.mrna2;Target=FBgn0033958.1 186 461 +
Chr2	stalkie_big_nohaplotig	exon	23349980	23350115	100	+	.	Parent=FBgn0033958.1.mrna2;Target=FBgn0033958.1 462 597 +
Chr2	stalkie_big_nohaplotig	exon	23350182	23351369	99	+	.	Parent=FBgn0033958.1.mrna2;Target=FBgn0033958.1 598 1785 +
Chr2	stalkie_big_nohaplotig	exon	23351485	23351673	100	+	.	Parent=FBgn0033958.1.mrna2;Target=FBgn0033958.1 1786 1974 +
Chr2	stalkie_big_nohaplotig	CDS	23347365	23347531	.	+	0	Parent=FBgn0033958.1.mrna2;Target=FBgn0033958.1 19 185 +
Chr2	stalkie_big_nohaplotig	CDS	23347587	23347862	.	+	1	Parent=FBgn0033958.1.mrna2;Target=FBgn0033958.1 186 461 +
Chr2	stalkie_big_nohaplotig	CDS	23349980	23350115	.	+	1	Parent=FBgn0033958.1.mrna2;Target=FBgn0033958.1 462 597 +
Chr2	stalkie_big_nohaplotig	CDS	23350182	23351369	.	+	0	Parent=FBgn0033958.1.mrna2;Target=FBgn0033958.1 598 1785 +
Chr2	stalkie_big_nohaplotig	CDS	23351485	23351673	.	+	0	Parent=FBgn0033958.1.mrna2;Target=FBgn0033958.1 1786 1974 +
Chr2	gffcl	locus	23353880	23354276	.	-	.	ID=RLOC_00015560;geneIDs=comp116928_c0_seq1.path2;transcripts=comp116928_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	23353880	23354276	.	-	.	ID=comp116928_c0_seq1.mrna2;geneID=comp116928_c0_seq1.path2;Name=comp116928_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=397;mismatches=0;indels=0;unknowns=0;Target=comp116928_c0_seq1 398 2 .;CDS_Target=comp116928_c0_seq1 298 182 .;locus=RLOC_00015560
Chr2	stalkie_big_nohaplotig	exon	23353880	23354276	100	-	.	Parent=comp116928_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	23353980	23354096	.	-	0	Parent=comp116928_c0_seq1.mrna2
Chr2	gffcl	locus	23356522	23357269	.	-	.	ID=RLOC_00015561;geneIDs=comp151030_c0_seq1.path1;transcripts=comp151030_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23356522	23357269	.	-	.	ID=comp151030_c0_seq1.mrna1;geneID=comp151030_c0_seq1.path1;Name=comp151030_c0_seq1;Dir=indeterminatecoverage=97.4;identity=99.3;matches=743;mismatches=4;indels=1;unknowns=0;Target=comp151030_c0_seq1 755 9 .;CDS_Target=comp151030_c0_seq1 131 9 .;locus=RLOC_00015561
Chr2	stalkie_big_nohaplotig	exon	23356522	23357269	99	-	.	Parent=comp151030_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23357147	23357269	.	-	0	Parent=comp151030_c0_seq1.mrna1
Chr2	gffcl	locus	23370383	23371314	.	+	.	ID=RLOC_00015562;geneIDs=comp158401_c0_seq1.path1;transcripts=comp158401_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23370383	23371314	.	+	.	ID=comp158401_c0_seq1.mrna1;geneID=comp158401_c0_seq1.path1;Name=comp158401_c0_seq1;Dir=indeterminatecoverage=99.4;identity=94.7;matches=889;mismatches=32;indels=18;unknowns=0;Target=comp158401_c0_seq1 933 6 .;CDS_Target=comp158401_c0_seq1 11 6 .;locus=RLOC_00015562
Chr2	stalkie_big_nohaplotig	exon	23370383	23371314	94	+	.	Parent=comp158401_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23370383	23370390	.	+	0	Parent=comp158401_c0_seq1.mrna1
Chr2	gffcl	locus	23398435	23400145	.	+	.	ID=RLOC_00015564;geneIDs=FBgn0038681.5.path1;transcripts=FBgn0038681.5.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23398435	23400145	.	+	.	ID=FBgn0038681.5.mrna1;geneID=FBgn0038681.5.path1;Name=FBgn0038681.5;Dir=sensecoverage=100.0;identity=98.7;matches=1480;mismatches=20;indels=0;unknowns=0;locus=RLOC_00015564
Chr2	stalkie_big_nohaplotig	exon	23398435	23398790	98	+	.	Parent=FBgn0038681.5.mrna1;Target=FBgn0038681.5 1 356 +
Chr2	stalkie_big_nohaplotig	exon	23398890	23399006	100	+	.	Parent=FBgn0038681.5.mrna1;Target=FBgn0038681.5 357 473 +
Chr2	stalkie_big_nohaplotig	exon	23399068	23399500	97	+	.	Parent=FBgn0038681.5.mrna1;Target=FBgn0038681.5 474 906 +
Chr2	stalkie_big_nohaplotig	exon	23399552	23400145	99	+	.	Parent=FBgn0038681.5.mrna1;Target=FBgn0038681.5 907 1500 +
Chr2	stalkie_big_nohaplotig	CDS	23398435	23398790	.	+	0	Parent=FBgn0038681.5.mrna1;Target=FBgn0038681.5 1 356 +
Chr2	stalkie_big_nohaplotig	CDS	23398890	23399006	.	+	1	Parent=FBgn0038681.5.mrna1;Target=FBgn0038681.5 357 473 +
Chr2	stalkie_big_nohaplotig	CDS	23399068	23399500	.	+	1	Parent=FBgn0038681.5.mrna1;Target=FBgn0038681.5 474 906 +
Chr2	stalkie_big_nohaplotig	CDS	23399552	23400145	.	+	0	Parent=FBgn0038681.5.mrna1;Target=FBgn0038681.5 907 1500 +
Chr2	gffcl	locus	23402941	23404424	.	+	.	ID=RLOC_00015565;geneIDs=FBgn0038681.6.path1;transcripts=FBgn0038681.6.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23402941	23404424	.	+	.	ID=FBgn0038681.6.mrna1;geneID=FBgn0038681.6.path1;Name=FBgn0038681.6;Dir=sensecoverage=100.0;identity=99.5;matches=1105;mismatches=4;indels=1;unknowns=0;locus=RLOC_00015565
Chr2	stalkie_big_nohaplotig	exon	23402941	23403075	100	+	.	Parent=FBgn0038681.6.mrna1;Target=FBgn0038681.6 1 135 +
Chr2	stalkie_big_nohaplotig	exon	23403260	23403615	100	+	.	Parent=FBgn0038681.6.mrna1;Target=FBgn0038681.6 136 491 +
Chr2	stalkie_big_nohaplotig	exon	23403691	23403807	100	+	.	Parent=FBgn0038681.6.mrna1;Target=FBgn0038681.6 492 608 +
Chr2	stalkie_big_nohaplotig	exon	23403869	23404301	99	+	.	Parent=FBgn0038681.6.mrna1;Target=FBgn0038681.6 609 1042 +
Chr2	stalkie_big_nohaplotig	exon	23404357	23404424	94	+	.	Parent=FBgn0038681.6.mrna1;Target=FBgn0038681.6 1043 1110 +
Chr2	stalkie_big_nohaplotig	CDS	23402941	23403075	.	+	0	Parent=FBgn0038681.6.mrna1;Target=FBgn0038681.6 1 135 +
Chr2	stalkie_big_nohaplotig	CDS	23403260	23403615	.	+	0	Parent=FBgn0038681.6.mrna1;Target=FBgn0038681.6 136 491 +
Chr2	stalkie_big_nohaplotig	CDS	23403691	23403807	.	+	1	Parent=FBgn0038681.6.mrna1;Target=FBgn0038681.6 492 608 +
Chr2	stalkie_big_nohaplotig	CDS	23403869	23404301	.	+	1	Parent=FBgn0038681.6.mrna1;Target=FBgn0038681.6 609 1042 +
Chr2	stalkie_big_nohaplotig	CDS	23404357	23404424	.	+	0	Parent=FBgn0038681.6.mrna1;Target=FBgn0038681.6 1043 1110 +
Chr2	gffcl	locus	23406489	23407488	.	-	.	ID=RLOC_00015566;geneIDs=comp140012_c2_seq1.path1;transcripts=comp140012_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23406489	23407488	.	-	.	ID=comp140012_c2_seq1.mrna1;geneID=comp140012_c2_seq1.path1;Name=comp140012_c2_seq1;Dir=indeterminatecoverage=99.9;identity=98.4;matches=984;mismatches=16;indels=0;unknowns=0;Target=comp140012_c2_seq1 1000 1 .;CDS_Target=comp140012_c2_seq1 708 547 .;locus=RLOC_00015566
Chr2	stalkie_big_nohaplotig	exon	23406489	23407488	98	-	.	Parent=comp140012_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23406781	23406942	.	-	0	Parent=comp140012_c2_seq1.mrna1
Chr2	gffcl	locus	23408641	23409741	.	-	.	ID=RLOC_00015567;geneIDs=ORF1448.path1;transcripts=ORF1448.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23408641	23409741	.	-	.	ID=ORF1448.mrna1;geneID=ORF1448.path1;Name=ORF1448;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1100;mismatches=1;indels=0;unknowns=0;Target=ORF1448 1101 1 .;locus=RLOC_00015567
Chr2	stalkie_big_nohaplotig	exon	23408641	23409741	99	-	.	Parent=ORF1448.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23408641	23409741	.	-	0	Parent=ORF1448.mrna1
Chr2	gffcl	locus	23443046	23444108	.	+	.	ID=RLOC_00015568;geneIDs=ORF1952.path1;transcripts=ORF1952.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23443046	23444108	.	+	.	ID=ORF1952.mrna1;geneID=ORF1952.path1;Name=ORF1952;Dir=sensecoverage=100.0;identity=98.5;matches=940;mismatches=14;indels=0;unknowns=0;locus=RLOC_00015568
Chr2	stalkie_big_nohaplotig	exon	23443046	23443457	99	+	.	Parent=ORF1952.mrna1;Target=ORF1952 1 412 +
Chr2	stalkie_big_nohaplotig	exon	23443567	23444108	97	+	.	Parent=ORF1952.mrna1;Target=ORF1952 413 954 +
Chr2	stalkie_big_nohaplotig	CDS	23443046	23443457	.	+	0	Parent=ORF1952.mrna1;Target=ORF1952 1 412 +
Chr2	stalkie_big_nohaplotig	CDS	23443567	23444108	.	+	2	Parent=ORF1952.mrna1;Target=ORF1952 413 954 +
Chr2	gffcl	locus	23446123	23446834	.	+	.	ID=RLOC_00015569;geneIDs=comp156294_c0_seq1.path1;transcripts=comp156294_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23446123	23446834	.	+	.	ID=comp156294_c0_seq1.mrna1;geneID=comp156294_c0_seq1.path1;Name=comp156294_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=709;mismatches=3;indels=0;unknowns=0;Target=comp156294_c0_seq1 712 1 .;CDS_Target=comp156294_c0_seq1 97 2 .;locus=RLOC_00015569
Chr2	stalkie_big_nohaplotig	exon	23446123	23446834	99	+	.	Parent=comp156294_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23446124	23446219	.	+	0	Parent=comp156294_c0_seq1.mrna1
Chr2	gffcl	locus	23496646	23499100	.	-	.	ID=RLOC_00015570;geneIDs=comp154318_c1_seq1.path1;transcripts=comp154318_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23496646	23499100	.	-	.	ID=comp154318_c1_seq1.mrna1;geneID=comp154318_c1_seq1.path1;Name=comp154318_c1_seq1;Dir=sensecoverage=99.9;identity=99.7;matches=1400;mismatches=4;indels=0;unknowns=0;Target=comp154318_c1_seq1 141 386 +;locus=RLOC_00015570
Chr2	stalkie_big_nohaplotig	exon	23496646	23496961	99	-	.	Parent=comp154318_c1_seq1.mrna1;Target=comp154318_c1_seq1 1090 1405 +
Chr2	stalkie_big_nohaplotig	exon	23497022	23497188	100	-	.	Parent=comp154318_c1_seq1.mrna1;Target=comp154318_c1_seq1 923 1089 +
Chr2	stalkie_big_nohaplotig	exon	23497258	23497710	99	-	.	Parent=comp154318_c1_seq1.mrna1;Target=comp154318_c1_seq1 470 922 +
Chr2	stalkie_big_nohaplotig	exon	23497775	23498144	99	-	.	Parent=comp154318_c1_seq1.mrna1;Target=comp154318_c1_seq1 100 469 +
Chr2	stalkie_big_nohaplotig	exon	23499003	23499100	100	-	.	Parent=comp154318_c1_seq1.mrna1;Target=comp154318_c1_seq1 2 99 +
Chr2	stalkie_big_nohaplotig	CDS	23497858	23498103	.	-	0	Parent=comp154318_c1_seq1.mrna1
Chr2	gffcl	locus	23510463	23513372	.	-	.	ID=RLOC_00015571;geneIDs=comp163071_c0_seq1.path1;transcripts=comp163071_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23510463	23513372	.	-	.	ID=comp163071_c0_seq1.mrna1;geneID=comp163071_c0_seq1.path1;Name=comp163071_c0_seq1;Dir=antisensecoverage=98.0;identity=96.6;matches=1442;mismatches=21;indels=30;unknowns=0;Target=comp163071_c0_seq1 988 1392 .;locus=RLOC_00015571
Chr2	stalkie_big_nohaplotig	exon	23510463	23510939	89	-	.	Parent=comp163071_c0_seq1.mrna1;Target=comp163071_c0_seq1 1 507 -
Chr2	stalkie_big_nohaplotig	exon	23512387	23513372	100	-	.	Parent=comp163071_c0_seq1.mrna1;Target=comp163071_c0_seq1 508 1493 -
Chr2	stalkie_big_nohaplotig	CDS	23512867	23513271	.	-	0	Parent=comp163071_c0_seq1.mrna1
Chr2	gffcl	locus	23536613	23542161	.	-	.	ID=RLOC_00015572;geneIDs=comp152237_c0_seq1.path1;transcripts=comp152237_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23536613	23542161	.	-	.	ID=comp152237_c0_seq1.mrna1;geneID=comp152237_c0_seq1.path1;Name=comp152237_c0_seq1;Dir=antisensecoverage=99.9;identity=99.9;matches=1201;mismatches=1;indels=0;unknowns=0;Target=comp152237_c0_seq1 179 433 .;locus=RLOC_00015572
Chr2	stalkie_big_nohaplotig	exon	23536613	23537389	99	-	.	Parent=comp152237_c0_seq1.mrna1;Target=comp152237_c0_seq1 2 778 -
Chr2	stalkie_big_nohaplotig	exon	23541192	23541461	100	-	.	Parent=comp152237_c0_seq1.mrna1;Target=comp152237_c0_seq1 779 1048 -
Chr2	stalkie_big_nohaplotig	exon	23542007	23542161	100	-	.	Parent=comp152237_c0_seq1.mrna1;Target=comp152237_c0_seq1 1049 1203 -
Chr2	stalkie_big_nohaplotig	CDS	23536790	23537044	.	-	0	Parent=comp152237_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23590071	23590899	.	+	.	ID=comp135875_c0_seq1.mrna1;geneID=comp135875_c0_seq1.path1;Name=comp135875_c0_seq1;Dir=indeterminatecoverage=98.0;identity=99.0;matches=821;mismatches=8;indels=0;unknowns=0;Target=comp135875_c0_seq1 842 14 .;CDS_Target=comp135875_c0_seq1 143 15 .;locus=RLOC_00015573
Chr2	stalkie_big_nohaplotig	exon	23590071	23590899	99	+	.	Parent=comp135875_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23590072	23590200	.	+	0	Parent=comp135875_c0_seq1.mrna1
Chr2	gffcl	locus	23572338	23573274	.	-	.	ID=RLOC_00015574;geneIDs=comp162016_c0_seq1.path1;transcripts=comp162016_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23572338	23573274	.	-	.	ID=comp162016_c0_seq1.mrna1;geneID=comp162016_c0_seq1.path1;Name=comp162016_c0_seq1;Dir=indeterminatecoverage=96.9;identity=97.4;matches=914;mismatches=23;indels=1;unknowns=0;Target=comp162016_c0_seq1 950 13 .;CDS_Target=comp162016_c0_seq1 490 125 .;locus=RLOC_00015574
Chr2	stalkie_big_nohaplotig	exon	23572338	23573274	97	-	.	Parent=comp162016_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23572797	23573162	.	-	0	Parent=comp162016_c0_seq1.mrna1
Chr2	gffcl	locus	23578142	23579098	.	-	.	ID=RLOC_00015575;geneIDs=comp152747_c0_seq1.path1;transcripts=comp152747_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23578142	23579098	.	-	.	ID=comp152747_c0_seq1.mrna1;geneID=comp152747_c0_seq1.path1;Name=comp152747_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.3;matches=951;mismatches=4;indels=3;unknowns=0;Target=comp152747_c0_seq1 957 2 .;CDS_Target=comp152747_c0_seq1 299 168 .;locus=RLOC_00015575
Chr2	stalkie_big_nohaplotig	exon	23578142	23579098	99	-	.	Parent=comp152747_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23578800	23578930	.	-	0	Parent=comp152747_c0_seq1.mrna1
Chr2	gffcl	locus	23579859	23580858	.	-	.	ID=RLOC_00015576;geneIDs=comp155862_c0_seq1.path1;transcripts=comp155862_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23579859	23580858	.	-	.	ID=comp155862_c0_seq1.mrna1;geneID=comp155862_c0_seq1.path1;Name=comp155862_c0_seq1;Dir=indeterminatecoverage=97.9;identity=99.8;matches=998;mismatches=2;indels=0;unknowns=0;Target=comp155862_c0_seq1 1021 22 .;CDS_Target=comp155862_c0_seq1 420 214 .;locus=RLOC_00015576
Chr2	stalkie_big_nohaplotig	exon	23579859	23580858	99	-	.	Parent=comp155862_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23580460	23580666	.	-	0	Parent=comp155862_c0_seq1.mrna1
Chr2	gffcl	locus	23582046	23582645	.	-	.	ID=RLOC_00015577;geneIDs=comp142747_c0_seq1.path1;transcripts=comp142747_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23582046	23582645	.	-	.	ID=comp142747_c0_seq1.mrna1;geneID=comp142747_c0_seq1.path1;Name=comp142747_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=599;mismatches=1;indels=0;unknowns=0;Target=comp142747_c0_seq1 600 1 .;CDS_Target=comp142747_c0_seq1 524 375 .;locus=RLOC_00015577
Chr2	stalkie_big_nohaplotig	exon	23582046	23582645	99	-	.	Parent=comp142747_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23582122	23582271	.	-	0	Parent=comp142747_c0_seq1.mrna1
Chr2	gffcl	locus	23602559	23604812	.	+	.	ID=RLOC_00015578;geneIDs=comp158213_c0_seq1.path1;transcripts=comp158213_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23602559	23604812	.	+	.	ID=comp158213_c0_seq1.mrna1;geneID=comp158213_c0_seq1.path1;Name=comp158213_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.8;matches=2250;mismatches=4;indels=0;unknowns=0;Target=comp158213_c0_seq1 2254 1 .;CDS_Target=comp158213_c0_seq1 1081 878 .;locus=RLOC_00015578
Chr2	stalkie_big_nohaplotig	exon	23602559	23604812	99	+	.	Parent=comp158213_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23603436	23603639	.	+	0	Parent=comp158213_c0_seq1.mrna1
Chr2	gffcl	locus	23613449	23616880	.	+	.	ID=RLOC_00015579;geneIDs=comp163597_c1_seq1.path1;transcripts=comp163597_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23613449	23616880	.	+	.	ID=comp163597_c1_seq1.mrna1;geneID=comp163597_c1_seq1.path1;Name=comp163597_c1_seq1;Dir=antisensecoverage=100.0;identity=98.0;matches=1436;mismatches=20;indels=10;unknowns=0;Target=comp163597_c1_seq1 980 1465 .;locus=RLOC_00015579
Chr2	stalkie_big_nohaplotig	exon	23613449	23613936	98	+	.	Parent=comp163597_c1_seq1.mrna1;Target=comp163597_c1_seq1 979 1466 -
Chr2	stalkie_big_nohaplotig	exon	23615664	23615896	100	+	.	Parent=comp163597_c1_seq1.mrna1;Target=comp163597_c1_seq1 746 978 -
Chr2	stalkie_big_nohaplotig	exon	23615968	23616195	99	+	.	Parent=comp163597_c1_seq1.mrna1;Target=comp163597_c1_seq1 518 745 -
Chr2	stalkie_big_nohaplotig	exon	23616374	23616880	95	+	.	Parent=comp163597_c1_seq1.mrna1;Target=comp163597_c1_seq1 1 517 -
Chr2	stalkie_big_nohaplotig	CDS	23613450	23613935	.	+	0	Parent=comp163597_c1_seq1.mrna1
Chr2	gffcl	locus	23619293	23620035	.	-	.	ID=RLOC_00015580;geneIDs=FBgn0037563.1.path1;transcripts=FBgn0037563.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23619293	23620035	.	-	.	ID=FBgn0037563.1.mrna1;geneID=FBgn0037563.1.path1;Name=FBgn0037563.1;Dir=sensecoverage=100.0;identity=100.0;matches=678;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015580
Chr2	stalkie_big_nohaplotig	exon	23619293	23619907	100	-	.	Parent=FBgn0037563.1.mrna1;Target=FBgn0037563.1 64 678 +
Chr2	stalkie_big_nohaplotig	exon	23619973	23620035	100	-	.	Parent=FBgn0037563.1.mrna1;Target=FBgn0037563.1 1 63 +
Chr2	stalkie_big_nohaplotig	CDS	23619293	23619907	.	-	0	Parent=FBgn0037563.1.mrna1;Target=FBgn0037563.1 64 678 +
Chr2	stalkie_big_nohaplotig	CDS	23619973	23620035	.	-	0	Parent=FBgn0037563.1.mrna1;Target=FBgn0037563.1 1 63 +
Chr2	gffcl	locus	23620336	23621134	.	+	.	ID=RLOC_00015581;geneIDs=FBgn0051464.1.path1;transcripts=FBgn0051464.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23620336	23621134	.	+	.	ID=FBgn0051464.1.mrna1;geneID=FBgn0051464.1.path1;Name=FBgn0051464.1;Dir=sensecoverage=100.0;identity=100.0;matches=717;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015581
Chr2	stalkie_big_nohaplotig	exon	23620336	23620377	100	+	.	Parent=FBgn0051464.1.mrna1;Target=FBgn0051464.1 1 42 +
Chr2	stalkie_big_nohaplotig	exon	23620460	23621134	100	+	.	Parent=FBgn0051464.1.mrna1;Target=FBgn0051464.1 43 717 +
Chr2	stalkie_big_nohaplotig	CDS	23620336	23620377	.	+	0	Parent=FBgn0051464.1.mrna1;Target=FBgn0051464.1 1 42 +
Chr2	stalkie_big_nohaplotig	CDS	23620460	23621134	.	+	0	Parent=FBgn0051464.1.mrna1;Target=FBgn0051464.1 43 717 +
Chr2	gffcl	locus	23626921	23627835	.	+	.	ID=RLOC_00015582;geneIDs=comp156759_c1_seq1.path1;transcripts=comp156759_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23626921	23627835	.	+	.	ID=comp156759_c1_seq1.mrna1;geneID=comp156759_c1_seq1.path1;Name=comp156759_c1_seq1;Dir=antisensecoverage=97.8;identity=97.9;matches=568;mismatches=12;indels=0;unknowns=0;locus=RLOC_00015582
Chr2	stalkie_big_nohaplotig	exon	23626921	23626978	100	+	.	Parent=comp156759_c1_seq1.mrna1;Target=comp156759_c1_seq1 536 593 -
Chr2	stalkie_big_nohaplotig	exon	23627047	23627185	92	+	.	Parent=comp156759_c1_seq1.mrna1;Target=comp156759_c1_seq1 397 535 -
Chr2	stalkie_big_nohaplotig	exon	23627396	23627556	100	+	.	Parent=comp156759_c1_seq1.mrna1;Target=comp156759_c1_seq1 236 396 -
Chr2	stalkie_big_nohaplotig	exon	23627614	23627835	99	+	.	Parent=comp156759_c1_seq1.mrna1;Target=comp156759_c1_seq1 14 235 -
Chr2	stalkie_big_nohaplotig	CDS	23627160	23627185	.	+	0	Parent=comp156759_c1_seq1.mrna1;Target=comp156759_c1_seq1 397 422 .
Chr2	stalkie_big_nohaplotig	CDS	23627396	23627556	.	+	1	Parent=comp156759_c1_seq1.mrna1;Target=comp156759_c1_seq1 236 396 .
Chr2	stalkie_big_nohaplotig	CDS	23627614	23627723	.	+	2	Parent=comp156759_c1_seq1.mrna1;Target=comp156759_c1_seq1 126 235 .
Chr2	gffcl	locus	23643047	23644370	.	-	.	ID=RLOC_00015583;geneIDs=ORF1046.path1;transcripts=ORF1046.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23643047	23644370	.	-	.	ID=ORF1046.mrna1;geneID=ORF1046.path1;Name=ORF1046;Dir=sensecoverage=100.0;identity=96.3;matches=1220;mismatches=30;indels=17;unknowns=0;locus=RLOC_00015583
Chr2	stalkie_big_nohaplotig	exon	23643047	23643960	95	-	.	Parent=ORF1046.mrna1;Target=ORF1046 338 1266 +
Chr2	stalkie_big_nohaplotig	exon	23644034	23644370	97	-	.	Parent=ORF1046.mrna1;Target=ORF1046 1 337 +
Chr2	stalkie_big_nohaplotig	CDS	23643047	23643960	.	-	2	Parent=ORF1046.mrna1;Target=ORF1046 338 1266 +
Chr2	stalkie_big_nohaplotig	CDS	23644034	23644370	.	-	0	Parent=ORF1046.mrna1;Target=ORF1046 1 337 +
Chr2	gffcl	locus	23646778	23647783	.	-	.	ID=RLOC_00015584;geneIDs=comp152830_c0_seq1.path1;transcripts=comp152830_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23646778	23647783	.	-	.	ID=comp152830_c0_seq1.mrna1;geneID=comp152830_c0_seq1.path1;Name=comp152830_c0_seq1;Dir=sensecoverage=99.9;identity=97.0;matches=829;mismatches=22;indels=4;unknowns=0;locus=RLOC_00015584
Chr2	stalkie_big_nohaplotig	exon	23646778	23647302	98	-	.	Parent=comp152830_c0_seq1.mrna1;Target=comp152830_c0_seq1 327 852 +
Chr2	stalkie_big_nohaplotig	exon	23647368	23647462	98	-	.	Parent=comp152830_c0_seq1.mrna1;Target=comp152830_c0_seq1 232 326 +
Chr2	stalkie_big_nohaplotig	exon	23647550	23647783	93	-	.	Parent=comp152830_c0_seq1.mrna1;Target=comp152830_c0_seq1 1 231 +
Chr2	stalkie_big_nohaplotig	CDS	23647115	23647302	.	-	2	Parent=comp152830_c0_seq1.mrna1;Target=comp152830_c0_seq1 327 514 +
Chr2	stalkie_big_nohaplotig	CDS	23647368	23647440	.	-	0	Parent=comp152830_c0_seq1.mrna1;Target=comp152830_c0_seq1 254 326 +
Chr2	gffcl	locus	23649732	23650789	.	+	.	ID=RLOC_00015585;geneIDs=comp157272_c0_seq1.path1;transcripts=comp157272_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23649732	23650789	.	+	.	ID=comp157272_c0_seq1.mrna1;geneID=comp157272_c0_seq1.path1;Name=comp157272_c0_seq1;Dir=antisensecoverage=100.0;identity=96.6;matches=632;mismatches=10;indels=12;unknowns=0;locus=RLOC_00015585
Chr2	stalkie_big_nohaplotig	exon	23649732	23649989	93	+	.	Parent=comp157272_c0_seq1.mrna1;Target=comp157272_c0_seq1 391 648 -
Chr2	stalkie_big_nohaplotig	exon	23650338	23650471	100	+	.	Parent=comp157272_c0_seq1.mrna1;Target=comp157272_c0_seq1 257 390 -
Chr2	stalkie_big_nohaplotig	exon	23650534	23650789	97	+	.	Parent=comp157272_c0_seq1.mrna1;Target=comp157272_c0_seq1 1 256 -
Chr2	stalkie_big_nohaplotig	CDS	23650360	23650471	.	+	0	Parent=comp157272_c0_seq1.mrna1;Target=comp157272_c0_seq1 257 368 .
Chr2	stalkie_big_nohaplotig	CDS	23650534	23650667	.	+	2	Parent=comp157272_c0_seq1.mrna1;Target=comp157272_c0_seq1 123 256 .
Chr2	gffcl	locus	23671184	23672015	.	-	.	ID=RLOC_00015586;geneIDs=comp154929_c1_seq1.path1;transcripts=comp154929_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23671184	23672015	.	-	.	ID=comp154929_c1_seq1.mrna1;geneID=comp154929_c1_seq1.path1;Name=comp154929_c1_seq1;Dir=sensecoverage=95.7;identity=99.6;matches=769;mismatches=3;indels=0;unknowns=0;Target=comp154929_c1_seq1 97 516 +;locus=RLOC_00015586
Chr2	stalkie_big_nohaplotig	exon	23671184	23671444	99	-	.	Parent=comp154929_c1_seq1.mrna1;Target=comp154929_c1_seq1 530 790 +
Chr2	stalkie_big_nohaplotig	exon	23671505	23672015	99	-	.	Parent=comp154929_c1_seq1.mrna1;Target=comp154929_c1_seq1 19 529 +
Chr2	stalkie_big_nohaplotig	CDS	23671518	23671937	.	-	0	Parent=comp154929_c1_seq1.mrna1
Chr2	gffcl	locus	23681136	23682167	.	-	.	ID=RLOC_00015587;geneIDs=comp153129_c1_seq1.path1;transcripts=comp153129_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23681136	23682167	.	-	.	ID=comp153129_c1_seq1.mrna1;geneID=comp153129_c1_seq1.path1;Name=comp153129_c1_seq1;Dir=indeterminatecoverage=99.3;identity=98.7;matches=1019;mismatches=12;indels=1;unknowns=0;Target=comp153129_c1_seq1 1031 1 .;CDS_Target=comp153129_c1_seq1 773 654 .;locus=RLOC_00015587
Chr2	stalkie_big_nohaplotig	exon	23681136	23682167	98	-	.	Parent=comp153129_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23681394	23681513	.	-	0	Parent=comp153129_c1_seq1.mrna1
Chr2	gffcl	locus	23686309	23687324	.	+	.	ID=RLOC_00015588;geneIDs=ORF2215.path1;transcripts=ORF2215.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23686309	23687324	.	+	.	ID=ORF2215.mrna1;geneID=ORF2215.path1;Name=ORF2215;Dir=sensecoverage=100.0;identity=97.1;matches=871;mismatches=23;indels=3;unknowns=0;locus=RLOC_00015588
Chr2	stalkie_big_nohaplotig	exon	23686309	23686537	98	+	.	Parent=ORF2215.mrna1;Target=ORF2215 1 229 +
Chr2	stalkie_big_nohaplotig	exon	23686597	23687216	96	+	.	Parent=ORF2215.mrna1;Target=ORF2215 230 852 +
Chr2	stalkie_big_nohaplotig	exon	23687280	23687324	100	+	.	Parent=ORF2215.mrna1;Target=ORF2215 853 897 +
Chr2	stalkie_big_nohaplotig	CDS	23686309	23686537	.	+	0	Parent=ORF2215.mrna1;Target=ORF2215 1 229 +
Chr2	stalkie_big_nohaplotig	CDS	23686597	23687216	.	+	2	Parent=ORF2215.mrna1;Target=ORF2215 230 852 +
Chr2	stalkie_big_nohaplotig	CDS	23687280	23687324	.	+	0	Parent=ORF2215.mrna1;Target=ORF2215 853 897 +
Chr2	gffcl	locus	23691828	23692546	.	+	.	ID=RLOC_00015589;geneIDs=comp156136_c0_seq1.path1;transcripts=comp156136_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23691828	23692546	.	+	.	ID=comp156136_c0_seq1.mrna1;geneID=comp156136_c0_seq1.path1;Name=comp156136_c0_seq1;Dir=indeterminatecoverage=92.9;identity=97.1;matches=699;mismatches=20;indels=1;unknowns=0;Target=comp156136_c0_seq1 720 1 .;CDS_Target=comp156136_c0_seq1 591 130 .;locus=RLOC_00015589
Chr2	stalkie_big_nohaplotig	exon	23691828	23692546	97	+	.	Parent=comp156136_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23691956	23692417	.	+	0	Parent=comp156136_c0_seq1.mrna1
Chr2	gffcl	locus	23743740	23744389	.	+	.	ID=RLOC_00015590;geneIDs=comp159455_c0_seq1.path1;transcripts=comp159455_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23743740	23744389	.	+	.	ID=comp159455_c0_seq1.mrna1;geneID=comp159455_c0_seq1.path1;Name=comp159455_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=466;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015590
Chr2	stalkie_big_nohaplotig	exon	23743740	23743881	100	+	.	Parent=comp159455_c0_seq1.mrna1;Target=comp159455_c0_seq1 1 142 +
Chr2	stalkie_big_nohaplotig	exon	23744014	23744220	99	+	.	Parent=comp159455_c0_seq1.mrna1;Target=comp159455_c0_seq1 143 349 +
Chr2	stalkie_big_nohaplotig	exon	23744271	23744389	100	+	.	Parent=comp159455_c0_seq1.mrna1;Target=comp159455_c0_seq1 350 468 +
Chr2	stalkie_big_nohaplotig	CDS	23743741	23743881	.	+	0	Parent=comp159455_c0_seq1.mrna1;Target=comp159455_c0_seq1 2 142 +
Chr2	stalkie_big_nohaplotig	CDS	23744014	23744220	.	+	0	Parent=comp159455_c0_seq1.mrna1;Target=comp159455_c0_seq1 143 349 +
Chr2	stalkie_big_nohaplotig	CDS	23744271	23744387	.	+	0	Parent=comp159455_c0_seq1.mrna1;Target=comp159455_c0_seq1 350 466 +
Chr2	gffcl	locus	23767638	23768831	.	-	.	ID=RLOC_00015591;geneIDs=FBgn0030737.1.path1;transcripts=FBgn0030737.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23767638	23768831	.	-	.	ID=FBgn0030737.1.mrna1;geneID=FBgn0030737.1.path1;Name=FBgn0030737.1;Dir=sensecoverage=100.0;identity=99.9;matches=959;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015591
Chr2	stalkie_big_nohaplotig	exon	23767638	23768162	99	-	.	Parent=FBgn0030737.1.mrna1;Target=FBgn0030737.1 436 960 +
Chr2	stalkie_big_nohaplotig	exon	23768255	23768633	100	-	.	Parent=FBgn0030737.1.mrna1;Target=FBgn0030737.1 57 435 +
Chr2	stalkie_big_nohaplotig	exon	23768776	23768831	100	-	.	Parent=FBgn0030737.1.mrna1;Target=FBgn0030737.1 1 56 +
Chr2	stalkie_big_nohaplotig	CDS	23767638	23768162	.	-	0	Parent=FBgn0030737.1.mrna1;Target=FBgn0030737.1 436 960 +
Chr2	stalkie_big_nohaplotig	CDS	23768255	23768633	.	-	1	Parent=FBgn0030737.1.mrna1;Target=FBgn0030737.1 57 435 +
Chr2	stalkie_big_nohaplotig	CDS	23768776	23768831	.	-	0	Parent=FBgn0030737.1.mrna1;Target=FBgn0030737.1 1 56 +
Chr2	gffcl	locus	23788341	23788947	.	-	.	ID=RLOC_00015593;geneIDs=comp146945_c0_seq1.path2;transcripts=comp146945_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	23788341	23788947	.	-	.	ID=comp146945_c0_seq1.mrna2;geneID=comp146945_c0_seq1.path2;Name=comp146945_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=592;mismatches=15;indels=0;unknowns=0;Target=comp146945_c0_seq1 607 1 .;CDS_Target=comp146945_c0_seq1 160 2 .;locus=RLOC_00015593
Chr2	stalkie_big_nohaplotig	exon	23788341	23788947	97	-	.	Parent=comp146945_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	23788788	23788946	.	-	0	Parent=comp146945_c0_seq1.mrna2
Chr2	gffcl	locus	23790275	23793199	.	+	.	ID=RLOC_00015595;geneIDs=ORF2801.path1,comp162978_c0_seq1.path1;transcripts=comp162978_c0_seq1.mrna1,ORF2801.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23790275	23793199	.	+	.	ID=comp162978_c0_seq1.mrna1;geneID=comp162978_c0_seq1.path1;Name=comp162978_c0_seq1;Dir=sensecoverage=99.2;identity=97.1;matches=2636;mismatches=58;indels=22;unknowns=0;locus=RLOC_00015595
Chr2	stalkie_big_nohaplotig	exon	23790275	23792364	96	+	.	Parent=comp162978_c0_seq1.mrna1;Target=comp162978_c0_seq1 23 2112 +
Chr2	stalkie_big_nohaplotig	exon	23792587	23793199	98	+	.	Parent=comp162978_c0_seq1.mrna1;Target=comp162978_c0_seq1 2113 2729 +
Chr2	stalkie_big_nohaplotig	CDS	23791784	23792364	.	+	0	Parent=comp162978_c0_seq1.mrna1;Target=comp162978_c0_seq1 1532 2112 +
Chr2	stalkie_big_nohaplotig	CDS	23792587	23792790	.	+	1	Parent=comp162978_c0_seq1.mrna1;Target=comp162978_c0_seq1 2113 2320 +
Chr2	stalkie_big_nohaplotig	mRNA	23791766	23792550	.	+	.	ID=ORF2801.mrna1;geneID=ORF2801.path1;Name=ORF2801;Dir=indeterminatecoverage=97.6;identity=97.6;matches=766;mismatches=19;indels=0;unknowns=0;Target=ORF2801 785 1 .;CDS_Target=ORF2801 783 1 .;locus=RLOC_00015595
Chr2	stalkie_big_nohaplotig	exon	23791766	23792550	97	+	.	Parent=ORF2801.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23791766	23792548	.	+	0	Parent=ORF2801.mrna1
Chr2	gffcl	locus	23793879	23794893	.	+	.	ID=RLOC_00015596;geneIDs=comp153791_c0_seq1.path1;transcripts=comp153791_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23793879	23794893	.	+	.	ID=comp153791_c0_seq1.mrna1;geneID=comp153791_c0_seq1.path1;Name=comp153791_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=1001;mismatches=9;indels=10;unknowns=0;Target=comp153791_c0_seq1 1015 1 .;CDS_Target=comp153791_c0_seq1 103 2 .;locus=RLOC_00015596
Chr2	stalkie_big_nohaplotig	exon	23793879	23794893	98	+	.	Parent=comp153791_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23793880	23793981	.	+	0	Parent=comp153791_c0_seq1.mrna1
Chr2	gffcl	locus	23795038	23795484	.	-	.	ID=RLOC_00015597;geneIDs=comp134913_c0_seq1.path1;transcripts=comp134913_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23795038	23795484	.	-	.	ID=comp134913_c0_seq1.mrna1;geneID=comp134913_c0_seq1.path1;Name=comp134913_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=447;mismatches=0;indels=1;unknowns=0;Target=comp134913_c0_seq1 448 1 .;CDS_Target=comp134913_c0_seq1 44 3 .;locus=RLOC_00015597
Chr2	stalkie_big_nohaplotig	exon	23795038	23795484	99	-	.	Parent=comp134913_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23795441	23795482	.	-	0	Parent=comp134913_c0_seq1.mrna1
Chr2	gffcl	locus	23834978	23835979	.	+	.	ID=RLOC_00015598;geneIDs=FBgn0034050.1.path1;transcripts=FBgn0034050.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23834978	23835979	.	+	.	ID=FBgn0034050.1.mrna1;geneID=FBgn0034050.1.path1;Name=FBgn0034050.1;Dir=sensecoverage=100.0;identity=99.6;matches=941;mismatches=4;indels=0;unknowns=0;locus=RLOC_00015598
Chr2	stalkie_big_nohaplotig	exon	23834978	23835041	96	+	.	Parent=FBgn0034050.1.mrna1;Target=FBgn0034050.1 1 64 +
Chr2	stalkie_big_nohaplotig	exon	23835099	23835979	99	+	.	Parent=FBgn0034050.1.mrna1;Target=FBgn0034050.1 65 945 +
Chr2	stalkie_big_nohaplotig	CDS	23834978	23835041	.	+	0	Parent=FBgn0034050.1.mrna1;Target=FBgn0034050.1 1 64 +
Chr2	stalkie_big_nohaplotig	CDS	23835099	23835979	.	+	2	Parent=FBgn0034050.1.mrna1;Target=FBgn0034050.1 65 945 +
Chr2	gffcl	locus	23836774	23837049	.	-	.	ID=RLOC_00015599;geneIDs=comp162599_c1_seq1.path2;transcripts=comp162599_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	23836774	23837049	.	-	.	ID=comp162599_c1_seq1.mrna2;geneID=comp162599_c1_seq1.path2;Name=comp162599_c1_seq1;Dir=indeterminatecoverage=14.0;identity=100.0;matches=276;mismatches=0;indels=0;unknowns=0;Target=comp162599_c1_seq1 1965 1690 .;locus=RLOC_00015599
Chr2	stalkie_big_nohaplotig	exon	23836774	23837049	100	-	.	Parent=comp162599_c1_seq1.mrna2
Chr2	gffcl	locus	23837174	23837404	.	-	.	ID=RLOC_00015600;geneIDs=comp70682_c0_seq1.path1;transcripts=comp70682_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23837174	23837404	.	-	.	ID=comp70682_c0_seq1.mrna1;geneID=comp70682_c0_seq1.path1;Name=comp70682_c0_seq1;Dir=indeterminatecoverage=93.5;identity=100.0;matches=231;mismatches=0;indels=0;unknowns=0;Target=comp70682_c0_seq1 247 17 .;CDS_Target=comp70682_c0_seq1 93 19 .;locus=RLOC_00015600
Chr2	stalkie_big_nohaplotig	exon	23837174	23837404	100	-	.	Parent=comp70682_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23837328	23837402	.	-	0	Parent=comp70682_c0_seq1.mrna1
Chr2	gffcl	locus	23837419	23837677	.	-	.	ID=RLOC_00015601;geneIDs=comp85397_c0_seq1.path1;transcripts=comp85397_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23837419	23837677	.	-	.	ID=comp85397_c0_seq1.mrna1;geneID=comp85397_c0_seq1.path1;Name=comp85397_c0_seq1;Dir=indeterminatecoverage=87.5;identity=100.0;matches=259;mismatches=0;indels=0;unknowns=0;Target=comp85397_c0_seq1 296 38 .;CDS_Target=comp85397_c0_seq1 103 38 .;locus=RLOC_00015601
Chr2	stalkie_big_nohaplotig	exon	23837419	23837677	100	-	.	Parent=comp85397_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23837612	23837677	.	-	0	Parent=comp85397_c0_seq1.mrna1
Chr2	gffcl	locus	23838005	23857382	.	.	.	ID=RLOC_00015602;geneIDs=FBgn0034051.1.path1,comp141041_c0_seq1.path1,comp149596_c0_seq1.path1,comp154740_c0_seq1.path1,comp154962_c1_seq1.path1,comp162133_c0_seq1.path1;transcripts=comp154962_c1_seq1.mrna1,FBgn0034051.1.mrna1,comp162133_c0_seq1.mrna1,comp149596_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23838788	23857382	.	-	.	ID=comp154962_c1_seq1.mrna1;geneID=comp154962_c1_seq1.path1;Name=comp154962_c1_seq1;Dir=sensecoverage=98.4;identity=99.5;matches=1926;mismatches=6;indels=4;unknowns=0;locus=RLOC_00015602
Chr2	stalkie_big_nohaplotig	exon	23838788	23839435	99	-	.	Parent=comp154962_c1_seq1.mrna1;Target=comp154962_c1_seq1 1287 1935 +
Chr2	stalkie_big_nohaplotig	exon	23847905	23848156	99	-	.	Parent=comp154962_c1_seq1.mrna1;Target=comp154962_c1_seq1 1035 1286 +
Chr2	stalkie_big_nohaplotig	exon	23852785	23853259	99	-	.	Parent=comp154962_c1_seq1.mrna1;Target=comp154962_c1_seq1 560 1034 +
Chr2	stalkie_big_nohaplotig	exon	23854407	23854612	100	-	.	Parent=comp154962_c1_seq1.mrna1;Target=comp154962_c1_seq1 354 559 +
Chr2	stalkie_big_nohaplotig	exon	23856975	23857183	99	-	.	Parent=comp154962_c1_seq1.mrna1;Target=comp154962_c1_seq1 145 353 +
Chr2	stalkie_big_nohaplotig	exon	23857240	23857382	99	-	.	Parent=comp154962_c1_seq1.mrna1;Target=comp154962_c1_seq1 1 144 +
Chr2	stalkie_big_nohaplotig	CDS	23839336	23839435	.	-	1	Parent=comp154962_c1_seq1.mrna1;Target=comp154962_c1_seq1 1287 1386 +
Chr2	stalkie_big_nohaplotig	CDS	23847905	23848156	.	-	1	Parent=comp154962_c1_seq1.mrna1;Target=comp154962_c1_seq1 1035 1286 +
Chr2	stalkie_big_nohaplotig	CDS	23852785	23853259	.	-	2	Parent=comp154962_c1_seq1.mrna1;Target=comp154962_c1_seq1 560 1034 +
Chr2	stalkie_big_nohaplotig	CDS	23854407	23854612	.	-	1	Parent=comp154962_c1_seq1.mrna1;Target=comp154962_c1_seq1 354 559 +
Chr2	stalkie_big_nohaplotig	CDS	23856975	23857024	.	-	0	Parent=comp154962_c1_seq1.mrna1;Target=comp154962_c1_seq1 304 353 +
Chr2	stalkie_big_nohaplotig	mRNA	23839339	23857027	.	-	.	ID=FBgn0034051.1.mrna1;geneID=FBgn0034051.1.path1;Name=FBgn0034051.1;Dir=sensecoverage=100.0;identity=99.8;matches=829;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015602
Chr2	stalkie_big_nohaplotig	exon	23839339	23839435	100	-	.	Parent=FBgn0034051.1.mrna1;Target=FBgn0034051.1 735 831 +
Chr2	stalkie_big_nohaplotig	exon	23852785	23853259	99	-	.	Parent=FBgn0034051.1.mrna1;Target=FBgn0034051.1 260 734 +
Chr2	stalkie_big_nohaplotig	exon	23854407	23854612	100	-	.	Parent=FBgn0034051.1.mrna1;Target=FBgn0034051.1 54 259 +
Chr2	stalkie_big_nohaplotig	exon	23856975	23857027	98	-	.	Parent=FBgn0034051.1.mrna1;Target=FBgn0034051.1 1 53 +
Chr2	stalkie_big_nohaplotig	CDS	23839339	23839435	.	-	1	Parent=FBgn0034051.1.mrna1;Target=FBgn0034051.1 735 831 +
Chr2	stalkie_big_nohaplotig	CDS	23852785	23853259	.	-	2	Parent=FBgn0034051.1.mrna1;Target=FBgn0034051.1 260 734 +
Chr2	stalkie_big_nohaplotig	CDS	23854407	23854612	.	-	1	Parent=FBgn0034051.1.mrna1;Target=FBgn0034051.1 54 259 +
Chr2	stalkie_big_nohaplotig	CDS	23856975	23857027	.	-	0	Parent=FBgn0034051.1.mrna1;Target=FBgn0034051.1 1 53 +
Chr2	stalkie_big_nohaplotig	mRNA	23839393	23840911	.	+	.	ID=comp162133_c0_seq1.mrna1;geneID=comp162133_c0_seq1.path1;Name=comp162133_c0_seq1;Dir=indeterminatecoverage=100.0;identity=88.4;matches=1469;mismatches=39;indels=154;unknowns=0;Target=comp162133_c0_seq1 1651 1 .;CDS_Target=comp162133_c0_seq1 1259 1104 .;locus=RLOC_00015602
Chr2	stalkie_big_nohaplotig	exon	23839393	23840911	88	+	.	Parent=comp162133_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23840364	23840519	.	+	0	Parent=comp162133_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23847122	23847865	.	+	.	ID=comp149596_c0_seq1.mrna1;geneID=comp149596_c0_seq1.path1;Name=comp149596_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=742;mismatches=2;indels=0;unknowns=0;Target=comp149596_c0_seq1 744 1 .;CDS_Target=comp149596_c0_seq1 533 396 .;locus=RLOC_00015602
Chr2	stalkie_big_nohaplotig	exon	23847122	23847865	99	+	.	Parent=comp149596_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23847517	23847654	.	+	0	Parent=comp149596_c0_seq1.mrna1
Chr2	gffcl	locus	23842831	23843866	.	+	.	ID=RLOC_00015603;geneIDs=comp139767_c1_seq1.path1;transcripts=comp139767_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23842831	23843866	.	+	.	ID=comp139767_c1_seq1.mrna1;geneID=comp139767_c1_seq1.path1;Name=comp139767_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1035;mismatches=1;indels=7;unknowns=0;Target=comp139767_c1_seq1 1043 1 .;CDS_Target=comp139767_c1_seq1 605 513 .;locus=RLOC_00015603
Chr2	stalkie_big_nohaplotig	exon	23842831	23843866	99	+	.	Parent=comp139767_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23843337	23843429	.	+	0	Parent=comp139767_c1_seq1.mrna1
Chr2	gffcl	locus	23859577	23860341	.	+	.	ID=RLOC_00015604;geneIDs=FBgn0034052.1.path1;transcripts=FBgn0034052.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23859577	23860341	.	+	.	ID=FBgn0034052.1.mrna1;geneID=FBgn0034052.1.path1;Name=FBgn0034052.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=765;mismatches=0;indels=0;unknowns=0;Target=FBgn0034052.1 765 1 .;locus=RLOC_00015604
Chr2	stalkie_big_nohaplotig	exon	23859577	23860341	100	+	.	Parent=FBgn0034052.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23859577	23860341	.	+	0	Parent=FBgn0034052.1.mrna1
Chr2	gffcl	locus	23864385	23865152	.	+	.	ID=RLOC_00015605;geneIDs=FBgn0043470.2.path1;transcripts=FBgn0043470.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23864385	23865152	.	+	.	ID=FBgn0043470.2.mrna1;geneID=FBgn0043470.2.path1;Name=FBgn0043470.2;Dir=indeterminatecoverage=100.0;identity=99.1;matches=761;mismatches=7;indels=0;unknowns=0;Target=FBgn0043470.2 768 1 .;locus=RLOC_00015605
Chr2	stalkie_big_nohaplotig	exon	23864385	23865152	99	+	.	Parent=FBgn0043470.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23864385	23865152	.	+	0	Parent=FBgn0043470.2.mrna1
Chr2	gffcl	locus	23867444	23868231	.	+	.	ID=RLOC_00015606;geneIDs=FBgn0043470.4.path1,FBgn0052271.2.path2;transcripts=FBgn0043470.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23867444	23868231	.	+	.	ID=FBgn0043470.4.mrna1;geneID=FBgn0043470.4.path1;Name=FBgn0043470.4;Dir=indeterminatecoverage=96.9;identity=99.5;matches=784;mismatches=4;indels=0;unknowns=0;Target=FBgn0043470.4 813 26 .;CDS_Target=FBgn0043470.4 813 28 .;locus=RLOC_00015606
Chr2	stalkie_big_nohaplotig	exon	23867444	23868231	99	+	.	Parent=FBgn0043470.4.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23867446	23868231	.	+	0	Parent=FBgn0043470.4.mrna1
Chr2	gffcl	locus	23876122	23877564	.	+	.	ID=RLOC_00015607;geneIDs=FBgn0037687.1.path1,comp141745_c0_seq1.path1;transcripts=FBgn0037687.1.mrna1,comp141745_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23876122	23877564	.	+	.	ID=FBgn0037687.1.mrna1;geneID=FBgn0037687.1.path1;Name=FBgn0037687.1;Dir=sensecoverage=100.0;identity=99.9;matches=920;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015607
Chr2	stalkie_big_nohaplotig	exon	23876122	23876218	100	+	.	Parent=FBgn0037687.1.mrna1;Target=FBgn0037687.1 1 97 +
Chr2	stalkie_big_nohaplotig	exon	23876275	23876679	99	+	.	Parent=FBgn0037687.1.mrna1;Target=FBgn0037687.1 98 502 +
Chr2	stalkie_big_nohaplotig	exon	23876734	23876835	100	+	.	Parent=FBgn0037687.1.mrna1;Target=FBgn0037687.1 503 604 +
Chr2	stalkie_big_nohaplotig	exon	23876893	23877126	100	+	.	Parent=FBgn0037687.1.mrna1;Target=FBgn0037687.1 605 838 +
Chr2	stalkie_big_nohaplotig	exon	23877482	23877564	100	+	.	Parent=FBgn0037687.1.mrna1;Target=FBgn0037687.1 839 921 +
Chr2	stalkie_big_nohaplotig	CDS	23876122	23876218	.	+	0	Parent=FBgn0037687.1.mrna1;Target=FBgn0037687.1 1 97 +
Chr2	stalkie_big_nohaplotig	CDS	23876275	23876679	.	+	2	Parent=FBgn0037687.1.mrna1;Target=FBgn0037687.1 98 502 +
Chr2	stalkie_big_nohaplotig	CDS	23876734	23876835	.	+	2	Parent=FBgn0037687.1.mrna1;Target=FBgn0037687.1 503 604 +
Chr2	stalkie_big_nohaplotig	CDS	23876893	23877126	.	+	2	Parent=FBgn0037687.1.mrna1;Target=FBgn0037687.1 605 838 +
Chr2	stalkie_big_nohaplotig	CDS	23877482	23877564	.	+	2	Parent=FBgn0037687.1.mrna1;Target=FBgn0037687.1 839 921 +
Chr2	stalkie_big_nohaplotig	mRNA	23877103	23877504	.	+	.	ID=comp141745_c0_seq1.mrna1;geneID=comp141745_c0_seq1.path1;Name=comp141745_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.0;matches=379;mismatches=12;indels=12;unknowns=0;Target=comp141745_c0_seq1 392 1 .;CDS_Target=comp141745_c0_seq1 354 196 .;locus=RLOC_00015607
Chr2	stalkie_big_nohaplotig	exon	23877103	23877504	94	+	.	Parent=comp141745_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23877309	23877466	.	+	0	Parent=comp141745_c0_seq1.mrna1
Chr2	gffcl	locus	23879019	25793636	.	-	.	ID=RLOC_00015608;geneIDs=comp162228_c0_seq1.path1;transcripts=comp162228_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23879019	25793636	.	-	.	ID=comp162228_c0_seq1.mrna1;geneID=comp162228_c0_seq1.path1;Name=comp162228_c0_seq1;Dir=indeterminatecoverage=67.4;identity=97.2;matches=1329;mismatches=22;indels=16;unknowns=0;Target=comp162228_c0_seq1 758 555 .;locus=RLOC_00015608
Chr2	stalkie_big_nohaplotig	exon	23879019	23879026	100	-	.	Parent=comp162228_c0_seq1.mrna1;Target=comp162228_c0_seq1 1496 1489 .
Chr2	stalkie_big_nohaplotig	exon	23880793	23880797	100	-	.	Parent=comp162228_c0_seq1.mrna1;Target=comp162228_c0_seq1 1488 1484 .
Chr2	stalkie_big_nohaplotig	exon	23883653	23883657	100	-	.	Parent=comp162228_c0_seq1.mrna1;Target=comp162228_c0_seq1 1483 1479 .
Chr2	stalkie_big_nohaplotig	exon	23883882	23883886	100	-	.	Parent=comp162228_c0_seq1.mrna1;Target=comp162228_c0_seq1 1478 1474 .
Chr2	stalkie_big_nohaplotig	exon	23886492	23886496	100	-	.	Parent=comp162228_c0_seq1.mrna1;Target=comp162228_c0_seq1 1473 1469 .
Chr2	stalkie_big_nohaplotig	exon	23902554	23902558	100	-	.	Parent=comp162228_c0_seq1.mrna1;Target=comp162228_c0_seq1 1468 1464 .
Chr2	stalkie_big_nohaplotig	exon	25792298	25793406	96	-	.	Parent=comp162228_c0_seq1.mrna1;Target=comp162228_c0_seq1 1454 344 .
Chr2	stalkie_big_nohaplotig	exon	25793421	25793636	98	-	.	Parent=comp162228_c0_seq1.mrna1;Target=comp162228_c0_seq1 318 103 .
Chr2	stalkie_big_nohaplotig	CDS	25793000	25793196	.	-	0	Parent=comp162228_c0_seq1.mrna1
Chr2	gffcl	locus	23879237	23880060	.	-	.	ID=RLOC_00015609;geneIDs=FBgn0034052.2.path1;transcripts=FBgn0034052.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23879237	23880060	.	-	.	ID=FBgn0034052.2.mrna1;geneID=FBgn0034052.2.path1;Name=FBgn0034052.2;Dir=indeterminatecoverage=97.7;identity=100.0;matches=824;mismatches=0;indels=0;unknowns=0;Target=FBgn0034052.2 843 20 .;CDS_Target=FBgn0034052.2 843 22 .;locus=RLOC_00015609
Chr2	stalkie_big_nohaplotig	exon	23879237	23880060	100	-	.	Parent=FBgn0034052.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23879237	23880058	.	-	0	Parent=FBgn0034052.2.mrna1
Chr2	gffcl	locus	23886105	23891712	.	+	.	ID=RLOC_00015610;geneIDs=ORF2227.path1;transcripts=ORF2227.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23886105	23891712	.	+	.	ID=ORF2227.mrna1;geneID=ORF2227.path1;Name=ORF2227;Dir=sensecoverage=100.0;identity=100.0;matches=894;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015610
Chr2	stalkie_big_nohaplotig	exon	23886105	23886387	100	+	.	Parent=ORF2227.mrna1;Target=ORF2227 1 283 +
Chr2	stalkie_big_nohaplotig	exon	23889836	23890018	100	+	.	Parent=ORF2227.mrna1;Target=ORF2227 284 466 +
Chr2	stalkie_big_nohaplotig	exon	23890903	23891053	100	+	.	Parent=ORF2227.mrna1;Target=ORF2227 467 617 +
Chr2	stalkie_big_nohaplotig	exon	23891110	23891179	100	+	.	Parent=ORF2227.mrna1;Target=ORF2227 618 687 +
Chr2	stalkie_big_nohaplotig	exon	23891506	23891712	100	+	.	Parent=ORF2227.mrna1;Target=ORF2227 688 894 +
Chr2	stalkie_big_nohaplotig	CDS	23886105	23886387	.	+	0	Parent=ORF2227.mrna1;Target=ORF2227 1 283 +
Chr2	stalkie_big_nohaplotig	CDS	23889836	23890018	.	+	2	Parent=ORF2227.mrna1;Target=ORF2227 284 466 +
Chr2	stalkie_big_nohaplotig	CDS	23890903	23891053	.	+	2	Parent=ORF2227.mrna1;Target=ORF2227 467 617 +
Chr2	stalkie_big_nohaplotig	CDS	23891110	23891179	.	+	1	Parent=ORF2227.mrna1;Target=ORF2227 618 687 +
Chr2	stalkie_big_nohaplotig	CDS	23891506	23891712	.	+	0	Parent=ORF2227.mrna1;Target=ORF2227 688 894 +
Chr2	gffcl	locus	23897614	23898429	.	-	.	ID=RLOC_00015611;geneIDs=FBgn0043470.1.path1;transcripts=FBgn0043470.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23897614	23898429	.	-	.	ID=FBgn0043470.1.mrna1;geneID=FBgn0043470.1.path1;Name=FBgn0043470.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=816;mismatches=0;indels=0;unknowns=0;Target=FBgn0043470.1 816 1 .;locus=RLOC_00015611
Chr2	stalkie_big_nohaplotig	exon	23897614	23898429	100	-	.	Parent=FBgn0043470.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23897614	23898429	.	-	0	Parent=FBgn0043470.1.mrna1
Chr2	gffcl	locus	23899539	23900348	.	-	.	ID=RLOC_00015612;geneIDs=FBgn0011556.2.path1;transcripts=FBgn0011556.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23899539	23900348	.	-	.	ID=FBgn0011556.2.mrna1;geneID=FBgn0011556.2.path1;Name=FBgn0011556.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=810;mismatches=0;indels=0;unknowns=0;Target=FBgn0011556.2 810 1 .;locus=RLOC_00015612
Chr2	stalkie_big_nohaplotig	exon	23899539	23900348	100	-	.	Parent=FBgn0011556.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23899539	23900348	.	-	0	Parent=FBgn0011556.2.mrna1
Chr2	gffcl	locus	23901378	23902223	.	-	.	ID=RLOC_00015613;geneIDs=FBgn0043471.1.path1;transcripts=FBgn0043471.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23901378	23902223	.	-	.	ID=FBgn0043471.1.mrna1;geneID=FBgn0043471.1.path1;Name=FBgn0043471.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=846;mismatches=0;indels=0;unknowns=0;Target=FBgn0043471.1 846 1 .;locus=RLOC_00015613
Chr2	stalkie_big_nohaplotig	exon	23901378	23902223	100	-	.	Parent=FBgn0043471.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23901378	23902223	.	-	0	Parent=FBgn0043471.1.mrna1
Chr2	gffcl	locus	23906318	23907163	.	-	.	ID=RLOC_00015615;geneIDs=FBgn0011556.1.path1;transcripts=FBgn0011556.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23906318	23907163	.	-	.	ID=FBgn0011556.1.mrna1;geneID=FBgn0011556.1.path1;Name=FBgn0011556.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=846;mismatches=0;indels=0;unknowns=0;Target=FBgn0011556.1 846 1 .;locus=RLOC_00015615
Chr2	stalkie_big_nohaplotig	exon	23906318	23907163	100	-	.	Parent=FBgn0011556.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23906318	23907163	.	-	0	Parent=FBgn0011556.1.mrna1
Chr2	gffcl	locus	23914006	23914839	.	-	.	ID=RLOC_00015616;geneIDs=FBgn0011556.3.path1;transcripts=FBgn0011556.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23914006	23914839	.	-	.	ID=FBgn0011556.3.mrna1;geneID=FBgn0011556.3.path1;Name=FBgn0011556.3;Dir=indeterminatecoverage=100.0;identity=100.0;matches=834;mismatches=0;indels=0;unknowns=0;Target=FBgn0011556.3 834 1 .;locus=RLOC_00015616
Chr2	stalkie_big_nohaplotig	exon	23914006	23914839	100	-	.	Parent=FBgn0011556.3.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23914006	23914839	.	-	0	Parent=FBgn0011556.3.mrna1
Chr2	gffcl	locus	23916892	23917746	.	-	.	ID=RLOC_00015617;geneIDs=FBgn0011554.1.path1;transcripts=FBgn0011554.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23916892	23917746	.	-	.	ID=FBgn0011554.1.mrna1;geneID=FBgn0011554.1.path1;Name=FBgn0011554.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=855;mismatches=0;indels=0;unknowns=0;Target=FBgn0011554.1 855 1 .;locus=RLOC_00015617
Chr2	stalkie_big_nohaplotig	exon	23916892	23917746	100	-	.	Parent=FBgn0011554.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23916892	23917746	.	-	0	Parent=FBgn0011554.1.mrna1
Chr2	gffcl	locus	23921853	23922103	.	+	.	ID=RLOC_00015618;geneIDs=comp710530_c0_seq1.path1;transcripts=comp710530_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23921853	23922103	.	+	.	ID=comp710530_c0_seq1.mrna1;geneID=comp710530_c0_seq1.path1;Name=comp710530_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=251;mismatches=0;indels=0;unknowns=0;Target=comp710530_c0_seq1 251 1 .;CDS_Target=comp710530_c0_seq1 131 33 .;locus=RLOC_00015618
Chr2	stalkie_big_nohaplotig	exon	23921853	23922103	100	+	.	Parent=comp710530_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23921885	23921983	.	+	0	Parent=comp710530_c0_seq1.mrna1
Chr2	gffcl	locus	23924720	23925168	.	-	.	ID=RLOC_00015619;geneIDs=Dv_FBgn0209645.2.path6;transcripts=Dv_FBgn0209645.2.mrna6
Chr2	stalkie_big_nohaplotig	mRNA	23924720	23925168	.	-	.	ID=Dv_FBgn0209645.2.mrna6;geneID=Dv_FBgn0209645.2.path6;Name=Dv_FBgn0209645.2;Dir=indeterminatecoverage=100.0;identity=97.3;matches=438;mismatches=11;indels=1;unknowns=0;Target=Dv_FBgn0209645.2 450 1 .;CDS_Target=Dv_FBgn0209645.2 47 3 .;locus=RLOC_00015619
Chr2	stalkie_big_nohaplotig	exon	23924720	23925168	97	-	.	Parent=Dv_FBgn0209645.2.mrna6
Chr2	stalkie_big_nohaplotig	CDS	23925123	23925166	.	-	0	Parent=Dv_FBgn0209645.2.mrna6
Chr2	gffcl	locus	23927748	23928521	.	-	.	ID=RLOC_00015620;geneIDs=FBgn0259998.1.path1;transcripts=FBgn0259998.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23927748	23928521	.	-	.	ID=FBgn0259998.1.mrna1;geneID=FBgn0259998.1.path1;Name=FBgn0259998.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=774;mismatches=0;indels=0;unknowns=0;Target=FBgn0259998.1 774 1 .;locus=RLOC_00015620
Chr2	stalkie_big_nohaplotig	exon	23927748	23928521	100	-	.	Parent=FBgn0259998.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23927748	23928521	.	-	0	Parent=FBgn0259998.1.mrna1
Chr2	gffcl	locus	23932595	23933365	.	-	.	ID=RLOC_00015621;geneIDs=FBgn0011555.1.path1;transcripts=FBgn0011555.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23932595	23933365	.	-	.	ID=FBgn0011555.1.mrna1;geneID=FBgn0011555.1.path1;Name=FBgn0011555.1;Dir=indeterminatecoverage=97.0;identity=100.0;matches=771;mismatches=0;indels=0;unknowns=0;Target=FBgn0011555.1 795 25 .;locus=RLOC_00015621
Chr2	stalkie_big_nohaplotig	exon	23932595	23933365	100	-	.	Parent=FBgn0011555.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	23932595	23933365	.	-	0	Parent=FBgn0011555.1.mrna1
Chr2	gffcl	locus	23935930	23936432	.	-	.	ID=RLOC_00015622;geneIDs=FBgn0004855.1.path1;transcripts=FBgn0004855.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23935930	23936432	.	-	.	ID=FBgn0004855.1.mrna1;geneID=FBgn0004855.1.path1;Name=FBgn0004855.1;Dir=sensecoverage=100.0;identity=99.2;matches=393;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015622
Chr2	stalkie_big_nohaplotig	exon	23935930	23936116	98	-	.	Parent=FBgn0004855.1.mrna1;Target=FBgn0004855.1 210 396 +
Chr2	stalkie_big_nohaplotig	exon	23936172	23936300	99	-	.	Parent=FBgn0004855.1.mrna1;Target=FBgn0004855.1 81 209 +
Chr2	stalkie_big_nohaplotig	exon	23936353	23936432	100	-	.	Parent=FBgn0004855.1.mrna1;Target=FBgn0004855.1 1 80 +
Chr2	stalkie_big_nohaplotig	CDS	23935930	23936116	.	-	1	Parent=FBgn0004855.1.mrna1;Target=FBgn0004855.1 210 396 +
Chr2	stalkie_big_nohaplotig	CDS	23936172	23936300	.	-	1	Parent=FBgn0004855.1.mrna1;Target=FBgn0004855.1 81 209 +
Chr2	stalkie_big_nohaplotig	CDS	23936353	23936432	.	-	0	Parent=FBgn0004855.1.mrna1;Target=FBgn0004855.1 1 80 +
Chr2	gffcl	locus	23938095	23938881	.	+	.	ID=RLOC_00015623;geneIDs=FBgn0034138.1.path1;transcripts=FBgn0034138.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23938095	23938881	.	+	.	ID=FBgn0034138.1.mrna1;geneID=FBgn0034138.1.path1;Name=FBgn0034138.1;Dir=sensecoverage=100.0;identity=100.0;matches=456;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015623
Chr2	stalkie_big_nohaplotig	exon	23938095	23938118	100	+	.	Parent=FBgn0034138.1.mrna1;Target=FBgn0034138.1 1 24 +
Chr2	stalkie_big_nohaplotig	exon	23938323	23938408	100	+	.	Parent=FBgn0034138.1.mrna1;Target=FBgn0034138.1 25 110 +
Chr2	stalkie_big_nohaplotig	exon	23938477	23938699	100	+	.	Parent=FBgn0034138.1.mrna1;Target=FBgn0034138.1 111 333 +
Chr2	stalkie_big_nohaplotig	exon	23938759	23938881	100	+	.	Parent=FBgn0034138.1.mrna1;Target=FBgn0034138.1 334 456 +
Chr2	stalkie_big_nohaplotig	CDS	23938095	23938118	.	+	0	Parent=FBgn0034138.1.mrna1;Target=FBgn0034138.1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	23938323	23938408	.	+	0	Parent=FBgn0034138.1.mrna1;Target=FBgn0034138.1 25 110 +
Chr2	stalkie_big_nohaplotig	CDS	23938477	23938699	.	+	1	Parent=FBgn0034138.1.mrna1;Target=FBgn0034138.1 111 333 +
Chr2	stalkie_big_nohaplotig	CDS	23938759	23938881	.	+	0	Parent=FBgn0034138.1.mrna1;Target=FBgn0034138.1 334 456 +
Chr2	gffcl	locus	23940787	23942002	.	+	.	ID=RLOC_00015624;geneIDs=comp143535_c0_seq1.path1,comp143535_c0_seq1.path2,comp157361_c0_seq1.path1;transcripts=comp143535_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	23940787	23941374	.	+	.	ID=comp143535_c0_seq1.mrna2;geneID=comp143535_c0_seq1.path2;Name=comp143535_c0_seq1;Dir=sensecoverage=87.2;identity=99.7;matches=381;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015624
Chr2	stalkie_big_nohaplotig	exon	23940787	23940875	100	+	.	Parent=comp143535_c0_seq1.mrna2;Target=comp143535_c0_seq1 38 126 +
Chr2	stalkie_big_nohaplotig	exon	23940929	23941029	100	+	.	Parent=comp143535_c0_seq1.mrna2;Target=comp143535_c0_seq1 127 227 +
Chr2	stalkie_big_nohaplotig	exon	23941183	23941374	99	+	.	Parent=comp143535_c0_seq1.mrna2;Target=comp143535_c0_seq1 228 419 +
Chr2	stalkie_big_nohaplotig	CDS	23940983	23941029	.	+	0	Parent=comp143535_c0_seq1.mrna2;Target=comp143535_c0_seq1 181 227 +
Chr2	stalkie_big_nohaplotig	CDS	23941183	23941303	.	+	1	Parent=comp143535_c0_seq1.mrna2;Target=comp143535_c0_seq1 228 348 +
Chr2	gffcl	locus	23945762	23950217	.	-	.	ID=RLOC_00015625;geneIDs=FBgn0040294.1.path1;transcripts=FBgn0040294.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23945762	23950217	.	-	.	ID=FBgn0040294.1.mrna1;geneID=FBgn0040294.1.path1;Name=FBgn0040294.1;Dir=sensecoverage=100.0;identity=99.9;matches=2963;mismatches=4;indels=0;unknowns=0;locus=RLOC_00015625
Chr2	stalkie_big_nohaplotig	exon	23945762	23945930	99	-	.	Parent=FBgn0040294.1.mrna1;Target=FBgn0040294.1 2799 2967 +
Chr2	stalkie_big_nohaplotig	exon	23946903	23947370	100	-	.	Parent=FBgn0040294.1.mrna1;Target=FBgn0040294.1 2331 2798 +
Chr2	stalkie_big_nohaplotig	exon	23947432	23948134	99	-	.	Parent=FBgn0040294.1.mrna1;Target=FBgn0040294.1 1628 2330 +
Chr2	stalkie_big_nohaplotig	exon	23948207	23949161	100	-	.	Parent=FBgn0040294.1.mrna1;Target=FBgn0040294.1 673 1627 +
Chr2	stalkie_big_nohaplotig	exon	23949231	23949658	100	-	.	Parent=FBgn0040294.1.mrna1;Target=FBgn0040294.1 245 672 +
Chr2	stalkie_big_nohaplotig	exon	23949917	23950025	99	-	.	Parent=FBgn0040294.1.mrna1;Target=FBgn0040294.1 136 244 +
Chr2	stalkie_big_nohaplotig	exon	23950083	23950217	100	-	.	Parent=FBgn0040294.1.mrna1;Target=FBgn0040294.1 1 135 +
Chr2	stalkie_big_nohaplotig	CDS	23945762	23945930	.	-	1	Parent=FBgn0040294.1.mrna1;Target=FBgn0040294.1 2799 2967 +
Chr2	stalkie_big_nohaplotig	CDS	23946903	23947370	.	-	1	Parent=FBgn0040294.1.mrna1;Target=FBgn0040294.1 2331 2798 +
Chr2	stalkie_big_nohaplotig	CDS	23947432	23948134	.	-	2	Parent=FBgn0040294.1.mrna1;Target=FBgn0040294.1 1628 2330 +
Chr2	stalkie_big_nohaplotig	CDS	23948207	23949161	.	-	0	Parent=FBgn0040294.1.mrna1;Target=FBgn0040294.1 673 1627 +
Chr2	stalkie_big_nohaplotig	CDS	23949231	23949658	.	-	2	Parent=FBgn0040294.1.mrna1;Target=FBgn0040294.1 245 672 +
Chr2	stalkie_big_nohaplotig	CDS	23949917	23950025	.	-	0	Parent=FBgn0040294.1.mrna1;Target=FBgn0040294.1 136 244 +
Chr2	stalkie_big_nohaplotig	CDS	23950083	23950217	.	-	0	Parent=FBgn0040294.1.mrna1;Target=FBgn0040294.1 1 135 +
Chr2	gffcl	locus	23952496	23954710	.	+	.	ID=RLOC_00015626;geneIDs=FBgn0034243.1.path1;transcripts=FBgn0034243.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23952496	23954710	.	+	.	ID=FBgn0034243.1.mrna1;geneID=FBgn0034243.1.path1;Name=FBgn0034243.1;Dir=sensecoverage=100.0;identity=99.5;matches=2084;mismatches=7;indels=3;unknowns=0;locus=RLOC_00015626
Chr2	stalkie_big_nohaplotig	exon	23952496	23952720	99	+	.	Parent=FBgn0034243.1.mrna1;Target=FBgn0034243.1 1 225 +
Chr2	stalkie_big_nohaplotig	exon	23952783	23953461	99	+	.	Parent=FBgn0034243.1.mrna1;Target=FBgn0034243.1 226 904 +
Chr2	stalkie_big_nohaplotig	exon	23953521	23954710	99	+	.	Parent=FBgn0034243.1.mrna1;Target=FBgn0034243.1 905 2091 +
Chr2	stalkie_big_nohaplotig	CDS	23952496	23952720	.	+	0	Parent=FBgn0034243.1.mrna1;Target=FBgn0034243.1 1 225 +
Chr2	stalkie_big_nohaplotig	CDS	23952783	23953461	.	+	0	Parent=FBgn0034243.1.mrna1;Target=FBgn0034243.1 226 904 +
Chr2	stalkie_big_nohaplotig	CDS	23953521	23954710	.	+	2	Parent=FBgn0034243.1.mrna1;Target=FBgn0034243.1 905 2091 +
Chr2	gffcl	locus	23957370	23958081	.	-	.	ID=RLOC_00015627;geneIDs=FBgn0034242.1.path1;transcripts=FBgn0034242.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	23957370	23958081	.	-	.	ID=FBgn0034242.1.mrna1;geneID=FBgn0034242.1.path1;Name=FBgn0034242.1;Dir=sensecoverage=100.0;identity=99.5;matches=594;mismatches=2;indels=1;unknowns=0;Target=FBgn0034242.1 3 17 +;locus=RLOC_00015627
Chr2	stalkie_big_nohaplotig	exon	23957370	23957753	99	-	.	Parent=FBgn0034242.1.mrna1;Target=FBgn0034242.1 214 597 +
Chr2	stalkie_big_nohaplotig	exon	23957814	23957974	99	-	.	Parent=FBgn0034242.1.mrna1;Target=FBgn0034242.1 53 213 +
Chr2	stalkie_big_nohaplotig	exon	23958031	23958081	98	-	.	Parent=FBgn0034242.1.mrna1;Target=FBgn0034242.1 1 52 +
Chr2	stalkie_big_nohaplotig	CDS	23958066	23958079	.	-	0	Parent=FBgn0034242.1.mrna1
Chr2	gffcl	locus	24075800	24076151	.	+	.	ID=RLOC_00015628;geneIDs=comp152394_c0_seq1.path1;transcripts=comp152394_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24075800	24076151	.	+	.	ID=comp152394_c0_seq1.mrna1;geneID=comp152394_c0_seq1.path1;Name=comp152394_c0_seq1;Dir=indeterminatecoverage=90.0;identity=98.3;matches=347;mismatches=4;indels=2;unknowns=0;Target=comp152394_c0_seq1 352 1 .;CDS_Target=comp152394_c0_seq1 62 3 .;locus=RLOC_00015628
Chr2	stalkie_big_nohaplotig	exon	24075800	24076151	98	+	.	Parent=comp152394_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	24075802	24075862	.	+	0	Parent=comp152394_c0_seq1.mrna1
Chr2	gffcl	locus	24159090	24159848	.	-	.	ID=RLOC_00015629;geneIDs=comp157468_c0_seq1.path1;transcripts=comp157468_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24159090	24159848	.	-	.	ID=comp157468_c0_seq1.mrna1;geneID=comp157468_c0_seq1.path1;Name=comp157468_c0_seq1;Dir=indeterminatecoverage=96.0;identity=95.3;matches=673;mismatches=16;indels=17;unknowns=0;Target=comp157468_c0_seq1 417 259 .;locus=RLOC_00015629
Chr2	stalkie_big_nohaplotig	exon	24159090	24159574	96	-	.	Parent=comp157468_c0_seq1.mrna1;Target=comp157468_c0_seq1 731 242 .
Chr2	stalkie_big_nohaplotig	exon	24159645	24159848	91	-	.	Parent=comp157468_c0_seq1.mrna1;Target=comp157468_c0_seq1 218 3 .
Chr2	stalkie_big_nohaplotig	CDS	24159399	24159557	.	-	0	Parent=comp157468_c0_seq1.mrna1
Chr2	gffcl	locus	24207811	24208705	.	+	.	ID=RLOC_00015630;geneIDs=comp156032_c1_seq1.path1;transcripts=comp156032_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24207811	24208705	.	+	.	ID=comp156032_c1_seq1.mrna1;geneID=comp156032_c1_seq1.path1;Name=comp156032_c1_seq1;Dir=sensecoverage=99.9;identity=98.2;matches=664;mismatches=11;indels=1;unknowns=0;Target=comp156032_c1_seq1 240 398 +;locus=RLOC_00015630
Chr2	stalkie_big_nohaplotig	exon	24207811	24207977	96	+	.	Parent=comp156032_c1_seq1.mrna1;Target=comp156032_c1_seq1 2 169 +
Chr2	stalkie_big_nohaplotig	exon	24208198	24208705	98	+	.	Parent=comp156032_c1_seq1.mrna1;Target=comp156032_c1_seq1 170 677 +
Chr2	stalkie_big_nohaplotig	CDS	24208268	24208426	.	+	0	Parent=comp156032_c1_seq1.mrna1
Chr2	gffcl	locus	24244185	24315872	.	+	.	ID=RLOC_00015631;geneIDs=FBgn0023172.1.path1;transcripts=FBgn0023172.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24244185	24315872	.	+	.	ID=FBgn0023172.1.mrna1;geneID=FBgn0023172.1.path1;Name=FBgn0023172.1;Dir=sensecoverage=100.0;identity=99.8;matches=5815;mismatches=14;indels=0;unknowns=0;locus=RLOC_00015631
Chr2	stalkie_big_nohaplotig	exon	24244185	24245805	99	+	.	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 1 1621 +
Chr2	stalkie_big_nohaplotig	exon	24246906	24247188	99	+	.	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 1622 1904 +
Chr2	stalkie_big_nohaplotig	exon	24247356	24247496	100	+	.	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 1905 2045 +
Chr2	stalkie_big_nohaplotig	exon	24266897	24267309	99	+	.	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 2046 2458 +
Chr2	stalkie_big_nohaplotig	exon	24267385	24267976	100	+	.	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 2459 3050 +
Chr2	stalkie_big_nohaplotig	exon	24268047	24268101	100	+	.	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 3051 3105 +
Chr2	stalkie_big_nohaplotig	exon	24268651	24268770	100	+	.	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 3106 3225 +
Chr2	stalkie_big_nohaplotig	exon	24268875	24269074	100	+	.	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 3226 3425 +
Chr2	stalkie_big_nohaplotig	exon	24312349	24314293	99	+	.	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 3426 5370 +
Chr2	stalkie_big_nohaplotig	exon	24314366	24314590	100	+	.	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 5371 5595 +
Chr2	stalkie_big_nohaplotig	exon	24314658	24314768	100	+	.	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 5596 5706 +
Chr2	stalkie_big_nohaplotig	exon	24315750	24315872	100	+	.	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 5707 5829 +
Chr2	stalkie_big_nohaplotig	CDS	24244185	24245805	.	+	0	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 1 1621 +
Chr2	stalkie_big_nohaplotig	CDS	24246906	24247188	.	+	2	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 1622 1904 +
Chr2	stalkie_big_nohaplotig	CDS	24247356	24247496	.	+	1	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 1905 2045 +
Chr2	stalkie_big_nohaplotig	CDS	24266897	24267309	.	+	1	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 2046 2458 +
Chr2	stalkie_big_nohaplotig	CDS	24267385	24267976	.	+	2	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 2459 3050 +
Chr2	stalkie_big_nohaplotig	CDS	24268047	24268101	.	+	1	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 3051 3105 +
Chr2	stalkie_big_nohaplotig	CDS	24268651	24268770	.	+	0	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 3106 3225 +
Chr2	stalkie_big_nohaplotig	CDS	24268875	24269074	.	+	0	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 3226 3425 +
Chr2	stalkie_big_nohaplotig	CDS	24312349	24314293	.	+	1	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 3426 5370 +
Chr2	stalkie_big_nohaplotig	CDS	24314366	24314590	.	+	0	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 5371 5595 +
Chr2	stalkie_big_nohaplotig	CDS	24314658	24314768	.	+	0	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 5596 5706 +
Chr2	stalkie_big_nohaplotig	CDS	24315750	24315872	.	+	0	Parent=FBgn0023172.1.mrna1;Target=FBgn0023172.1 5707 5829 +
Chr2	gffcl	locus	24318869	24319618	.	-	.	ID=RLOC_00015632;geneIDs=FBgn0032033.1.path1;transcripts=FBgn0032033.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24318869	24319618	.	-	.	ID=FBgn0032033.1.mrna1;geneID=FBgn0032033.1.path1;Name=FBgn0032033.1;Dir=sensecoverage=100.0;identity=99.7;matches=679;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015632
Chr2	stalkie_big_nohaplotig	exon	24318869	24319418	99	-	.	Parent=FBgn0032033.1.mrna1;Target=FBgn0032033.1 132 681 +
Chr2	stalkie_big_nohaplotig	exon	24319488	24319618	100	-	.	Parent=FBgn0032033.1.mrna1;Target=FBgn0032033.1 1 131 +
Chr2	stalkie_big_nohaplotig	CDS	24318869	24319418	.	-	1	Parent=FBgn0032033.1.mrna1;Target=FBgn0032033.1 132 681 +
Chr2	stalkie_big_nohaplotig	CDS	24319488	24319618	.	-	0	Parent=FBgn0032033.1.mrna1;Target=FBgn0032033.1 1 131 +
Chr2	gffcl	locus	24321396	24321852	.	-	.	ID=RLOC_00015633;geneIDs=comp140941_c0_seq1.path1;transcripts=comp140941_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24321396	24321852	.	-	.	ID=comp140941_c0_seq1.mrna1;geneID=comp140941_c0_seq1.path1;Name=comp140941_c0_seq1;Dir=indeterminatecoverage=96.6;identity=99.1;matches=453;mismatches=3;indels=1;unknowns=0;Target=comp140941_c0_seq1 472 17 .;CDS_Target=comp140941_c0_seq1 331 143 .;locus=RLOC_00015633
Chr2	stalkie_big_nohaplotig	exon	24321396	24321852	99	-	.	Parent=comp140941_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	24321537	24321725	.	-	0	Parent=comp140941_c0_seq1.mrna1
Chr2	gffcl	locus	24323346	24323829	.	-	.	ID=RLOC_00015634;geneIDs=comp49355_c0_seq1.path1;transcripts=comp49355_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24323346	24323829	.	-	.	ID=comp49355_c0_seq1.mrna1;geneID=comp49355_c0_seq1.path1;Name=comp49355_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=484;mismatches=0;indels=0;unknowns=0;Target=comp49355_c0_seq1 484 1 .;CDS_Target=comp49355_c0_seq1 89 3 .;locus=RLOC_00015634
Chr2	stalkie_big_nohaplotig	exon	24323346	24323829	100	-	.	Parent=comp49355_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	24323741	24323827	.	-	0	Parent=comp49355_c0_seq1.mrna1
Chr2	gffcl	locus	24355106	24355815	.	+	.	ID=RLOC_00015636;geneIDs=FBgn0034081.1.path1;transcripts=FBgn0034081.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24355106	24355815	.	+	.	ID=FBgn0034081.1.mrna1;geneID=FBgn0034081.1.path1;Name=FBgn0034081.1;Dir=indeterminatecoverage=100.0;identity=96.3;matches=684;mismatches=3;indels=23;unknowns=0;Target=FBgn0034081.1 687 1 .;CDS_Target=FBgn0034081.1 687 70 .;locus=RLOC_00015636
Chr2	stalkie_big_nohaplotig	exon	24355106	24355815	96	+	.	Parent=FBgn0034081.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	24355198	24355815	.	+	0	Parent=FBgn0034081.1.mrna1
Chr2	gffcl	locus	24356463	24361492	.	-	.	ID=RLOC_00015637;geneIDs=FBgn0034452.1.path1;transcripts=FBgn0034452.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24356463	24361492	.	-	.	ID=FBgn0034452.1.mrna1;geneID=FBgn0034452.1.path1;Name=FBgn0034452.1;Dir=sensecoverage=100.0;identity=99.8;matches=4131;mismatches=9;indels=0;unknowns=0;locus=RLOC_00015637
Chr2	stalkie_big_nohaplotig	exon	24356463	24356565	100	-	.	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 4038 4140 +
Chr2	stalkie_big_nohaplotig	exon	24356627	24356996	100	-	.	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 3668 4037 +
Chr2	stalkie_big_nohaplotig	exon	24357147	24358230	99	-	.	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 2584 3667 +
Chr2	stalkie_big_nohaplotig	exon	24358283	24358454	100	-	.	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 2412 2583 +
Chr2	stalkie_big_nohaplotig	exon	24358528	24358810	100	-	.	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 2129 2411 +
Chr2	stalkie_big_nohaplotig	exon	24358869	24359153	100	-	.	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 1844 2128 +
Chr2	stalkie_big_nohaplotig	exon	24359261	24359402	100	-	.	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 1702 1843 +
Chr2	stalkie_big_nohaplotig	exon	24359552	24359701	98	-	.	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 1552 1701 +
Chr2	stalkie_big_nohaplotig	exon	24359761	24360126	100	-	.	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 1186 1551 +
Chr2	stalkie_big_nohaplotig	exon	24360179	24360422	99	-	.	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 942 1185 +
Chr2	stalkie_big_nohaplotig	exon	24360487	24361212	99	-	.	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 216 941 +
Chr2	stalkie_big_nohaplotig	exon	24361278	24361492	99	-	.	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 1 215 +
Chr2	stalkie_big_nohaplotig	CDS	24356463	24356565	.	-	1	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 4038 4140 +
Chr2	stalkie_big_nohaplotig	CDS	24356627	24356996	.	-	2	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 3668 4037 +
Chr2	stalkie_big_nohaplotig	CDS	24357147	24358230	.	-	0	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 2584 3667 +
Chr2	stalkie_big_nohaplotig	CDS	24358283	24358454	.	-	1	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 2412 2583 +
Chr2	stalkie_big_nohaplotig	CDS	24358528	24358810	.	-	2	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 2129 2411 +
Chr2	stalkie_big_nohaplotig	CDS	24358869	24359153	.	-	2	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 1844 2128 +
Chr2	stalkie_big_nohaplotig	CDS	24359261	24359402	.	-	0	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 1702 1843 +
Chr2	stalkie_big_nohaplotig	CDS	24359552	24359701	.	-	0	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 1552 1701 +
Chr2	stalkie_big_nohaplotig	CDS	24359761	24360126	.	-	0	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 1186 1551 +
Chr2	stalkie_big_nohaplotig	CDS	24360179	24360422	.	-	1	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 942 1185 +
Chr2	stalkie_big_nohaplotig	CDS	24360487	24361212	.	-	1	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 216 941 +
Chr2	stalkie_big_nohaplotig	CDS	24361278	24361492	.	-	0	Parent=FBgn0034452.1.mrna1;Target=FBgn0034452.1 1 215 +
Chr2	gffcl	locus	24364365	24366145	.	+	.	ID=RLOC_00015638;geneIDs=FBgn0026378.1.path1;transcripts=FBgn0026378.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24364365	24366145	.	+	.	ID=FBgn0026378.1.mrna1;geneID=FBgn0026378.1.path1;Name=FBgn0026378.1;Dir=sensecoverage=100.0;identity=99.9;matches=1652;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015638
Chr2	stalkie_big_nohaplotig	exon	24364365	24364458	98	+	.	Parent=FBgn0026378.1.mrna1;Target=FBgn0026378.1 1 94 +
Chr2	stalkie_big_nohaplotig	exon	24364521	24365642	100	+	.	Parent=FBgn0026378.1.mrna1;Target=FBgn0026378.1 95 1216 +
Chr2	stalkie_big_nohaplotig	exon	24365709	24366145	100	+	.	Parent=FBgn0026378.1.mrna1;Target=FBgn0026378.1 1217 1653 +
Chr2	stalkie_big_nohaplotig	CDS	24364365	24364458	.	+	0	Parent=FBgn0026378.1.mrna1;Target=FBgn0026378.1 1 94 +
Chr2	stalkie_big_nohaplotig	CDS	24364521	24365642	.	+	2	Parent=FBgn0026378.1.mrna1;Target=FBgn0026378.1 95 1216 +
Chr2	stalkie_big_nohaplotig	CDS	24365709	24366145	.	+	2	Parent=FBgn0026378.1.mrna1;Target=FBgn0026378.1 1217 1653 +
Chr2	gffcl	locus	24370656	24373596	.	-	.	ID=RLOC_00015639;geneIDs=FBgn0261456.1.path1;transcripts=FBgn0261456.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24370656	24373596	.	-	.	ID=FBgn0261456.1.mrna1;geneID=FBgn0261456.1.path1;Name=FBgn0261456.1;Dir=sensecoverage=100.0;identity=99.8;matches=1575;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015639
Chr2	stalkie_big_nohaplotig	exon	24370656	24370999	99	-	.	Parent=FBgn0261456.1.mrna1;Target=FBgn0261456.1 1235 1578 +
Chr2	stalkie_big_nohaplotig	exon	24372363	24373596	99	-	.	Parent=FBgn0261456.1.mrna1;Target=FBgn0261456.1 1 1234 +
Chr2	stalkie_big_nohaplotig	CDS	24370656	24370999	.	-	2	Parent=FBgn0261456.1.mrna1;Target=FBgn0261456.1 1235 1578 +
Chr2	stalkie_big_nohaplotig	CDS	24372363	24373596	.	-	0	Parent=FBgn0261456.1.mrna1;Target=FBgn0261456.1 1 1234 +
Chr2	gffcl	locus	24375713	24379586	.	+	.	ID=RLOC_00015640;geneIDs=FBgn0027079.1.path1;transcripts=FBgn0027079.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24375713	24379586	.	+	.	ID=FBgn0027079.1.mrna1;geneID=FBgn0027079.1.path1;Name=FBgn0027079.1;Dir=sensecoverage=100.0;identity=99.5;matches=3143;mismatches=16;indels=0;unknowns=0;locus=RLOC_00015640
Chr2	stalkie_big_nohaplotig	exon	24375713	24375910	98	+	.	Parent=FBgn0027079.1.mrna1;Target=FBgn0027079.1 1 198 +
Chr2	stalkie_big_nohaplotig	exon	24376066	24376233	98	+	.	Parent=FBgn0027079.1.mrna1;Target=FBgn0027079.1 199 366 +
Chr2	stalkie_big_nohaplotig	exon	24376340	24376894	99	+	.	Parent=FBgn0027079.1.mrna1;Target=FBgn0027079.1 367 921 +
Chr2	stalkie_big_nohaplotig	exon	24376954	24377453	99	+	.	Parent=FBgn0027079.1.mrna1;Target=FBgn0027079.1 922 1421 +
Chr2	stalkie_big_nohaplotig	exon	24377516	24377723	100	+	.	Parent=FBgn0027079.1.mrna1;Target=FBgn0027079.1 1422 1629 +
Chr2	stalkie_big_nohaplotig	exon	24377933	24378962	99	+	.	Parent=FBgn0027079.1.mrna1;Target=FBgn0027079.1 1630 2659 +
Chr2	stalkie_big_nohaplotig	exon	24379087	24379586	99	+	.	Parent=FBgn0027079.1.mrna1;Target=FBgn0027079.1 2660 3159 +
Chr2	stalkie_big_nohaplotig	CDS	24375713	24375910	.	+	0	Parent=FBgn0027079.1.mrna1;Target=FBgn0027079.1 1 198 +
Chr2	stalkie_big_nohaplotig	CDS	24376066	24376233	.	+	0	Parent=FBgn0027079.1.mrna1;Target=FBgn0027079.1 199 366 +
Chr2	stalkie_big_nohaplotig	CDS	24376340	24376894	.	+	0	Parent=FBgn0027079.1.mrna1;Target=FBgn0027079.1 367 921 +
Chr2	stalkie_big_nohaplotig	CDS	24376954	24377453	.	+	0	Parent=FBgn0027079.1.mrna1;Target=FBgn0027079.1 922 1421 +
Chr2	stalkie_big_nohaplotig	CDS	24377516	24377723	.	+	1	Parent=FBgn0027079.1.mrna1;Target=FBgn0027079.1 1422 1629 +
Chr2	stalkie_big_nohaplotig	CDS	24377933	24378962	.	+	0	Parent=FBgn0027079.1.mrna1;Target=FBgn0027079.1 1630 2659 +
Chr2	stalkie_big_nohaplotig	CDS	24379087	24379586	.	+	2	Parent=FBgn0027079.1.mrna1;Target=FBgn0027079.1 2660 3159 +
Chr2	gffcl	locus	24381282	24383907	.	-	.	ID=RLOC_00015641;geneIDs=FBgn0005654.1.path1;transcripts=FBgn0005654.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24381282	24383907	.	-	.	ID=FBgn0005654.1.mrna1;geneID=FBgn0005654.1.path1;Name=FBgn0005654.1;Dir=sensecoverage=100.0;identity=99.9;matches=2194;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015641
Chr2	stalkie_big_nohaplotig	exon	24381282	24381375	100	-	.	Parent=FBgn0005654.1.mrna1;Target=FBgn0005654.1 2103 2196 +
Chr2	stalkie_big_nohaplotig	exon	24381437	24382509	99	-	.	Parent=FBgn0005654.1.mrna1;Target=FBgn0005654.1 1030 2102 +
Chr2	stalkie_big_nohaplotig	exon	24382575	24382700	100	-	.	Parent=FBgn0005654.1.mrna1;Target=FBgn0005654.1 904 1029 +
Chr2	stalkie_big_nohaplotig	exon	24382767	24383314	100	-	.	Parent=FBgn0005654.1.mrna1;Target=FBgn0005654.1 356 903 +
Chr2	stalkie_big_nohaplotig	exon	24383384	24383684	100	-	.	Parent=FBgn0005654.1.mrna1;Target=FBgn0005654.1 55 355 +
Chr2	stalkie_big_nohaplotig	exon	24383854	24383907	100	-	.	Parent=FBgn0005654.1.mrna1;Target=FBgn0005654.1 1 54 +
Chr2	stalkie_big_nohaplotig	CDS	24381282	24381375	.	-	1	Parent=FBgn0005654.1.mrna1;Target=FBgn0005654.1 2103 2196 +
Chr2	stalkie_big_nohaplotig	CDS	24381437	24382509	.	-	0	Parent=FBgn0005654.1.mrna1;Target=FBgn0005654.1 1030 2102 +
Chr2	stalkie_big_nohaplotig	CDS	24382575	24382700	.	-	0	Parent=FBgn0005654.1.mrna1;Target=FBgn0005654.1 904 1029 +
Chr2	stalkie_big_nohaplotig	CDS	24382767	24383314	.	-	2	Parent=FBgn0005654.1.mrna1;Target=FBgn0005654.1 356 903 +
Chr2	stalkie_big_nohaplotig	CDS	24383384	24383684	.	-	0	Parent=FBgn0005654.1.mrna1;Target=FBgn0005654.1 55 355 +
Chr2	stalkie_big_nohaplotig	CDS	24383854	24383907	.	-	0	Parent=FBgn0005654.1.mrna1;Target=FBgn0005654.1 1 54 +
Chr2	gffcl	locus	24385769	24387813	.	+	.	ID=RLOC_00015642;geneIDs=ORF409.path1;transcripts=ORF409.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24385769	24387813	.	+	.	ID=ORF409.mrna1;geneID=ORF409.path1;Name=ORF409;Dir=sensecoverage=99.7;identity=99.9;matches=1875;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015642
Chr2	stalkie_big_nohaplotig	exon	24385769	24385837	100	+	.	Parent=ORF409.mrna1;Target=ORF409 1 69 +
Chr2	stalkie_big_nohaplotig	exon	24385929	24386098	100	+	.	Parent=ORF409.mrna1;Target=ORF409 70 239 +
Chr2	stalkie_big_nohaplotig	exon	24386177	24387813	99	+	.	Parent=ORF409.mrna1;Target=ORF409 240 1876 +
Chr2	stalkie_big_nohaplotig	CDS	24385769	24385837	.	+	0	Parent=ORF409.mrna1;Target=ORF409 1 69 +
Chr2	stalkie_big_nohaplotig	CDS	24385929	24386098	.	+	0	Parent=ORF409.mrna1;Target=ORF409 70 239 +
Chr2	stalkie_big_nohaplotig	CDS	24386177	24387812	.	+	1	Parent=ORF409.mrna1;Target=ORF409 240 1875 +
Chr2	gffcl	locus	24392105	24395967	.	-	.	ID=RLOC_00015643;geneIDs=FBgn0033807.1.path1;transcripts=FBgn0033807.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24392105	24395967	.	-	.	ID=FBgn0033807.1.mrna1;geneID=FBgn0033807.1.path1;Name=FBgn0033807.1;Dir=sensecoverage=100.0;identity=99.4;matches=799;mismatches=5;indels=0;unknowns=0;locus=RLOC_00015643
Chr2	stalkie_big_nohaplotig	exon	24392105	24392304	97	-	.	Parent=FBgn0033807.1.mrna1;Target=FBgn0033807.1 605 804 +
Chr2	stalkie_big_nohaplotig	exon	24394184	24394322	100	-	.	Parent=FBgn0033807.1.mrna1;Target=FBgn0033807.1 466 604 +
Chr2	stalkie_big_nohaplotig	exon	24395428	24395702	100	-	.	Parent=FBgn0033807.1.mrna1;Target=FBgn0033807.1 191 465 +
Chr2	stalkie_big_nohaplotig	exon	24395778	24395967	100	-	.	Parent=FBgn0033807.1.mrna1;Target=FBgn0033807.1 1 190 +
Chr2	stalkie_big_nohaplotig	CDS	24392105	24392304	.	-	2	Parent=FBgn0033807.1.mrna1;Target=FBgn0033807.1 605 804 +
Chr2	stalkie_big_nohaplotig	CDS	24394184	24394322	.	-	0	Parent=FBgn0033807.1.mrna1;Target=FBgn0033807.1 466 604 +
Chr2	stalkie_big_nohaplotig	CDS	24395428	24395702	.	-	2	Parent=FBgn0033807.1.mrna1;Target=FBgn0033807.1 191 465 +
Chr2	stalkie_big_nohaplotig	CDS	24395778	24395967	.	-	0	Parent=FBgn0033807.1.mrna1;Target=FBgn0033807.1 1 190 +
Chr2	gffcl	locus	24401876	24402597	.	+	.	ID=RLOC_00015644;geneIDs=FBgn0033808.1.path1;transcripts=FBgn0033808.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24401876	24402597	.	+	.	ID=FBgn0033808.1.mrna1;geneID=FBgn0033808.1.path1;Name=FBgn0033808.1;Dir=sensecoverage=100.0;identity=99.2;matches=658;mismatches=5;indels=0;unknowns=0;locus=RLOC_00015644
Chr2	stalkie_big_nohaplotig	exon	24401876	24401916	97	+	.	Parent=FBgn0033808.1.mrna1;Target=FBgn0033808.1 1 41 +
Chr2	stalkie_big_nohaplotig	exon	24401976	24402597	99	+	.	Parent=FBgn0033808.1.mrna1;Target=FBgn0033808.1 42 663 +
Chr2	stalkie_big_nohaplotig	CDS	24401876	24401916	.	+	0	Parent=FBgn0033808.1.mrna1;Target=FBgn0033808.1 1 41 +
Chr2	stalkie_big_nohaplotig	CDS	24401976	24402597	.	+	1	Parent=FBgn0033808.1.mrna1;Target=FBgn0033808.1 42 663 +
Chr2	gffcl	locus	24403010	24408884	.	-	.	ID=RLOC_00015645;geneIDs=FBgn0033809.1.path1;transcripts=FBgn0033809.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24403010	24408884	.	-	.	ID=FBgn0033809.1.mrna1;geneID=FBgn0033809.1.path1;Name=FBgn0033809.1;Dir=sensecoverage=100.0;identity=99.5;matches=1722;mismatches=9;indels=0;unknowns=0;locus=RLOC_00015645
Chr2	stalkie_big_nohaplotig	exon	24403010	24403135	99	-	.	Parent=FBgn0033809.1.mrna1;Target=FBgn0033809.1 1606 1731 +
Chr2	stalkie_big_nohaplotig	exon	24404566	24404676	99	-	.	Parent=FBgn0033809.1.mrna1;Target=FBgn0033809.1 1495 1605 +
Chr2	stalkie_big_nohaplotig	exon	24404737	24404817	98	-	.	Parent=FBgn0033809.1.mrna1;Target=FBgn0033809.1 1414 1494 +
Chr2	stalkie_big_nohaplotig	exon	24404882	24404982	100	-	.	Parent=FBgn0033809.1.mrna1;Target=FBgn0033809.1 1313 1413 +
Chr2	stalkie_big_nohaplotig	exon	24405154	24405247	100	-	.	Parent=FBgn0033809.1.mrna1;Target=FBgn0033809.1 1219 1312 +
Chr2	stalkie_big_nohaplotig	exon	24405320	24405440	99	-	.	Parent=FBgn0033809.1.mrna1;Target=FBgn0033809.1 1098 1218 +
Chr2	stalkie_big_nohaplotig	exon	24405723	24406298	99	-	.	Parent=FBgn0033809.1.mrna1;Target=FBgn0033809.1 522 1097 +
Chr2	stalkie_big_nohaplotig	exon	24406367	24406473	100	-	.	Parent=FBgn0033809.1.mrna1;Target=FBgn0033809.1 415 521 +
Chr2	stalkie_big_nohaplotig	exon	24408355	24408616	99	-	.	Parent=FBgn0033809.1.mrna1;Target=FBgn0033809.1 153 414 +
Chr2	stalkie_big_nohaplotig	exon	24408733	24408884	100	-	.	Parent=FBgn0033809.1.mrna1;Target=FBgn0033809.1 1 152 +
Chr2	stalkie_big_nohaplotig	CDS	24403010	24403135	.	-	0	Parent=FBgn0033809.1.mrna1;Target=FBgn0033809.1 1606 1731 +
Chr2	stalkie_big_nohaplotig	CDS	24404566	24404676	.	-	0	Parent=FBgn0033809.1.mrna1;Target=FBgn0033809.1 1495 1605 +
Chr2	stalkie_big_nohaplotig	CDS	24404737	24404817	.	-	0	Parent=FBgn0033809.1.mrna1;Target=FBgn0033809.1 1414 1494 +
Chr2	stalkie_big_nohaplotig	CDS	24404882	24404982	.	-	2	Parent=FBgn0033809.1.mrna1;Target=FBgn0033809.1 1313 1413 +
Chr2	stalkie_big_nohaplotig	CDS	24405154	24405247	.	-	0	Parent=FBgn0033809.1.mrna1;Target=FBgn0033809.1 1219 1312 +
Chr2	stalkie_big_nohaplotig	CDS	24405320	24405440	.	-	1	Parent=FBgn0033809.1.mrna1;Target=FBgn0033809.1 1098 1218 +
Chr2	stalkie_big_nohaplotig	CDS	24405723	24406298	.	-	1	Parent=FBgn0033809.1.mrna1;Target=FBgn0033809.1 522 1097 +
Chr2	stalkie_big_nohaplotig	CDS	24406367	24406473	.	-	0	Parent=FBgn0033809.1.mrna1;Target=FBgn0033809.1 415 521 +
Chr2	stalkie_big_nohaplotig	CDS	24408355	24408616	.	-	1	Parent=FBgn0033809.1.mrna1;Target=FBgn0033809.1 153 414 +
Chr2	stalkie_big_nohaplotig	CDS	24408733	24408884	.	-	0	Parent=FBgn0033809.1.mrna1;Target=FBgn0033809.1 1 152 +
Chr2	gffcl	locus	24441188	24441876	.	+	.	ID=RLOC_00015647;geneIDs=FBgn0033658.1.path1;transcripts=FBgn0033658.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24441188	24441876	.	+	.	ID=FBgn0033658.1.mrna1;geneID=FBgn0033658.1.path1;Name=FBgn0033658.1;Dir=indeterminatecoverage=96.2;identity=99.1;matches=684;mismatches=5;indels=1;unknowns=0;Target=FBgn0033658.1 717 28 .;CDS_Target=FBgn0033658.1 717 115 .;locus=RLOC_00015647
Chr2	stalkie_big_nohaplotig	exon	24441188	24441876	99	+	.	Parent=FBgn0033658.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	24441274	24441876	.	+	0	Parent=FBgn0033658.1.mrna1
Chr2	gffcl	locus	24444646	24444960	.	+	.	ID=RLOC_00015648;geneIDs=comp137201_c0_seq1.path1;transcripts=comp137201_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24444646	24444960	.	+	.	ID=comp137201_c0_seq1.mrna1;geneID=comp137201_c0_seq1.path1;Name=comp137201_c0_seq1;Dir=indeterminatecoverage=85.1;identity=99.7;matches=314;mismatches=1;indels=0;unknowns=0;Target=comp137201_c0_seq1 315 1 .;CDS_Target=comp137201_c0_seq1 126 1 .;locus=RLOC_00015648
Chr2	stalkie_big_nohaplotig	exon	24444646	24444960	99	+	.	Parent=comp137201_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	24444646	24444771	.	+	0	Parent=comp137201_c0_seq1.mrna1
Chr2	gffcl	locus	24445341	24445568	.	+	.	ID=RLOC_00015649;geneIDs=comp147813_c0_seq1.path1;transcripts=comp147813_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24445341	24445568	.	+	.	ID=comp147813_c0_seq1.mrna1;geneID=comp147813_c0_seq1.path1;Name=comp147813_c0_seq1;Dir=indeterminatecoverage=99.6;identity=97.4;matches=222;mismatches=6;indels=0;unknowns=0;Target=comp147813_c0_seq1 229 2 .;CDS_Target=comp147813_c0_seq1 228 154 .;locus=RLOC_00015649
Chr2	stalkie_big_nohaplotig	exon	24445341	24445568	97	+	.	Parent=comp147813_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	24445493	24445567	.	+	0	Parent=comp147813_c0_seq1.mrna1
Chr2	gffcl	locus	24445759	24446256	.	-	.	ID=RLOC_00015650;geneIDs=comp154173_c0_seq1.path1;transcripts=comp154173_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24445759	24446256	.	-	.	ID=comp154173_c0_seq1.mrna1;geneID=comp154173_c0_seq1.path1;Name=comp154173_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=495;mismatches=3;indels=0;unknowns=0;Target=comp154173_c0_seq1 498 1 .;CDS_Target=comp154173_c0_seq1 426 274 .;locus=RLOC_00015650
Chr2	stalkie_big_nohaplotig	exon	24445759	24446256	99	-	.	Parent=comp154173_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	24445831	24445983	.	-	0	Parent=comp154173_c0_seq1.mrna1
Chr2	gffcl	locus	24447223	24447568	.	-	.	ID=RLOC_00015651;geneIDs=comp137152_c0_seq1.path1;transcripts=comp137152_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24447223	24447568	.	-	.	ID=comp137152_c0_seq1.mrna1;geneID=comp137152_c0_seq1.path1;Name=comp137152_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=344;mismatches=2;indels=0;unknowns=0;Target=comp137152_c0_seq1 346 1 .;CDS_Target=comp137152_c0_seq1 130 41 .;locus=RLOC_00015651
Chr2	stalkie_big_nohaplotig	exon	24447223	24447568	99	-	.	Parent=comp137152_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	24447439	24447528	.	-	0	Parent=comp137152_c0_seq1.mrna1
Chr2	gffcl	locus	24447694	24448043	.	+	.	ID=RLOC_00015652;geneIDs=comp137445_c0_seq1.path1;transcripts=comp137445_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24447694	24448043	.	+	.	ID=comp137445_c0_seq1.mrna1;geneID=comp137445_c0_seq1.path1;Name=comp137445_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.7;matches=349;mismatches=1;indels=0;unknowns=0;Target=comp137445_c0_seq1 350 1 .;CDS_Target=comp137445_c0_seq1 246 184 .;locus=RLOC_00015652
Chr2	stalkie_big_nohaplotig	exon	24447694	24448043	99	+	.	Parent=comp137445_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	24447877	24447939	.	+	0	Parent=comp137445_c0_seq1.mrna1
Chr2	gffcl	locus	24448392	24449332	.	-	.	ID=RLOC_00015653;geneIDs=comp152108_c0_seq1.path1;transcripts=comp152108_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24448392	24449332	.	-	.	ID=comp152108_c0_seq1.mrna1;geneID=comp152108_c0_seq1.path1;Name=comp152108_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=935;mismatches=6;indels=14;unknowns=0;Target=comp152108_c0_seq1 955 1 .;CDS_Target=comp152108_c0_seq1 340 2 .;locus=RLOC_00015653
Chr2	stalkie_big_nohaplotig	exon	24448392	24449332	97	-	.	Parent=comp152108_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	24448993	24449331	.	-	0	Parent=comp152108_c0_seq1.mrna1
Chr2	gffcl	locus	24495360	24496196	.	-	.	ID=RLOC_00015654;geneIDs=comp147792_c0_seq1.path1;transcripts=comp147792_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24495360	24496196	.	-	.	ID=comp147792_c0_seq1.mrna1;geneID=comp147792_c0_seq1.path1;Name=comp147792_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=591;mismatches=1;indels=0;unknowns=0;Target=comp147792_c0_seq1 497 526 +;locus=RLOC_00015654
Chr2	stalkie_big_nohaplotig	exon	24495360	24495557	100	-	.	Parent=comp147792_c0_seq1.mrna1;Target=comp147792_c0_seq1 395 592 +
Chr2	stalkie_big_nohaplotig	exon	24495611	24495870	100	-	.	Parent=comp147792_c0_seq1.mrna1;Target=comp147792_c0_seq1 135 394 +
Chr2	stalkie_big_nohaplotig	exon	24495927	24496040	99	-	.	Parent=comp147792_c0_seq1.mrna1;Target=comp147792_c0_seq1 21 134 +
Chr2	stalkie_big_nohaplotig	exon	24496177	24496196	100	-	.	Parent=comp147792_c0_seq1.mrna1;Target=comp147792_c0_seq1 1 20 +
Chr2	stalkie_big_nohaplotig	CDS	24495426	24495455	.	-	0	Parent=comp147792_c0_seq1.mrna1
Chr2	gffcl	locus	24518575	24531166	.	+	.	ID=RLOC_00015655;geneIDs=FBgn0040752.1.path2;transcripts=FBgn0040752.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	24518575	24531166	.	+	.	ID=FBgn0040752.1.mrna2;geneID=FBgn0040752.1.path2;Name=FBgn0040752.1;Dir=sensecoverage=93.1;identity=99.8;matches=3293;mismatches=7;indels=0;unknowns=0;locus=RLOC_00015655
Chr2	stalkie_big_nohaplotig	exon	24518575	24518700	100	+	.	Parent=FBgn0040752.1.mrna2;Target=FBgn0040752.1 244 369 +
Chr2	stalkie_big_nohaplotig	exon	24520113	24520444	99	+	.	Parent=FBgn0040752.1.mrna2;Target=FBgn0040752.1 370 701 +
Chr2	stalkie_big_nohaplotig	exon	24520773	24520941	100	+	.	Parent=FBgn0040752.1.mrna2;Target=FBgn0040752.1 702 870 +
Chr2	stalkie_big_nohaplotig	exon	24521408	24521602	100	+	.	Parent=FBgn0040752.1.mrna2;Target=FBgn0040752.1 871 1065 +
Chr2	stalkie_big_nohaplotig	exon	24521896	24521962	100	+	.	Parent=FBgn0040752.1.mrna2;Target=FBgn0040752.1 1066 1132 +
Chr2	stalkie_big_nohaplotig	exon	24526672	24526917	99	+	.	Parent=FBgn0040752.1.mrna2;Target=FBgn0040752.1 1133 1378 +
Chr2	stalkie_big_nohaplotig	exon	24528881	24529472	99	+	.	Parent=FBgn0040752.1.mrna2;Target=FBgn0040752.1 1379 1970 +
Chr2	stalkie_big_nohaplotig	exon	24529528	24530887	100	+	.	Parent=FBgn0040752.1.mrna2;Target=FBgn0040752.1 1971 3330 +
Chr2	stalkie_big_nohaplotig	exon	24530954	24531166	99	+	.	Parent=FBgn0040752.1.mrna2;Target=FBgn0040752.1 3331 3543 +
Chr2	stalkie_big_nohaplotig	CDS	24518575	24518700	.	+	0	Parent=FBgn0040752.1.mrna2;Target=FBgn0040752.1 244 369 +
Chr2	stalkie_big_nohaplotig	CDS	24520113	24520444	.	+	0	Parent=FBgn0040752.1.mrna2;Target=FBgn0040752.1 370 701 +
Chr2	stalkie_big_nohaplotig	CDS	24520773	24520941	.	+	1	Parent=FBgn0040752.1.mrna2;Target=FBgn0040752.1 702 870 +
Chr2	stalkie_big_nohaplotig	CDS	24521408	24521602	.	+	0	Parent=FBgn0040752.1.mrna2;Target=FBgn0040752.1 871 1065 +
Chr2	stalkie_big_nohaplotig	CDS	24521896	24521962	.	+	0	Parent=FBgn0040752.1.mrna2;Target=FBgn0040752.1 1066 1132 +
Chr2	stalkie_big_nohaplotig	CDS	24526672	24526917	.	+	2	Parent=FBgn0040752.1.mrna2;Target=FBgn0040752.1 1133 1378 +
Chr2	stalkie_big_nohaplotig	CDS	24528881	24529472	.	+	2	Parent=FBgn0040752.1.mrna2;Target=FBgn0040752.1 1379 1970 +
Chr2	stalkie_big_nohaplotig	CDS	24529528	24530887	.	+	1	Parent=FBgn0040752.1.mrna2;Target=FBgn0040752.1 1971 3330 +
Chr2	stalkie_big_nohaplotig	CDS	24530954	24531166	.	+	0	Parent=FBgn0040752.1.mrna2;Target=FBgn0040752.1 3331 3543 +
Chr2	gffcl	locus	24532842	24534327	.	+	.	ID=RLOC_00015656;geneIDs=comp161560_c0_seq1.path1;transcripts=comp161560_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24532842	24534327	.	+	.	ID=comp161560_c0_seq1.mrna1;geneID=comp161560_c0_seq1.path1;Name=comp161560_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1477;mismatches=9;indels=0;unknowns=0;Target=comp161560_c0_seq1 1486 1 .;CDS_Target=comp161560_c0_seq1 221 3 .;locus=RLOC_00015656
Chr2	stalkie_big_nohaplotig	exon	24532842	24534327	99	+	.	Parent=comp161560_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	24532844	24533062	.	+	0	Parent=comp161560_c0_seq1.mrna1
Chr2	gffcl	locus	24536629	24537267	.	+	.	ID=RLOC_00015657;geneIDs=comp130820_c0_seq1.path1;transcripts=comp130820_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24536629	24537267	.	+	.	ID=comp130820_c0_seq1.mrna1;geneID=comp130820_c0_seq1.path1;Name=comp130820_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=638;mismatches=1;indels=0;unknowns=0;Target=comp130820_c0_seq1 639 1 .;CDS_Target=comp130820_c0_seq1 599 525 .;locus=RLOC_00015657
Chr2	stalkie_big_nohaplotig	exon	24536629	24537267	99	+	.	Parent=comp130820_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	24537153	24537227	.	+	0	Parent=comp130820_c0_seq1.mrna1
Chr2	gffcl	locus	24539740	24688743	.	-	.	ID=RLOC_00015658;geneIDs=FBgn0033897.1.path1;transcripts=FBgn0033897.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24539740	24688743	.	-	.	ID=FBgn0033897.1.mrna1;geneID=FBgn0033897.1.path1;Name=FBgn0033897.1;Dir=sensecoverage=78.9;identity=96.2;matches=2404;mismatches=58;indels=37;unknowns=0;locus=RLOC_00015658
Chr2	stalkie_big_nohaplotig	exon	24539740	24540530	99	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 2531 3321 +
Chr2	stalkie_big_nohaplotig	exon	24540606	24541409	99	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 1727 2530 +
Chr2	stalkie_big_nohaplotig	exon	24541489	24541581	100	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 1634 1726 +
Chr2	stalkie_big_nohaplotig	exon	24542623	24542827	100	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 1429 1633 +
Chr2	stalkie_big_nohaplotig	exon	24542892	24543039	100	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 1281 1428 +
Chr2	stalkie_big_nohaplotig	exon	24543153	24543320	100	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 1113 1280 +
Chr2	stalkie_big_nohaplotig	exon	24561215	24561226	83	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 1056 1067 +
Chr2	stalkie_big_nohaplotig	exon	24577559	24577563	100	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 1051 1055 +
Chr2	stalkie_big_nohaplotig	exon	24581421	24581429	30	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 1028 1050 +
Chr2	stalkie_big_nohaplotig	exon	24587311	24587332	62	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 996 1024 +
Chr2	stalkie_big_nohaplotig	exon	24601672	24601677	100	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 990 995 +
Chr2	stalkie_big_nohaplotig	exon	24606956	24606969	55	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 970 989 +
Chr2	stalkie_big_nohaplotig	exon	24630865	24630874	100	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 960 969 +
Chr2	stalkie_big_nohaplotig	exon	24634877	24634880	100	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 956 959 +
Chr2	stalkie_big_nohaplotig	exon	24634907	24634915	100	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 895 903 +
Chr2	stalkie_big_nohaplotig	exon	24638992	24638995	100	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 891 894 +
Chr2	stalkie_big_nohaplotig	exon	24639159	24639164	100	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 885 890 +
Chr2	stalkie_big_nohaplotig	exon	24641909	24641955	55	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 837 884 +
Chr2	stalkie_big_nohaplotig	exon	24645707	24645714	100	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 829 836 +
Chr2	stalkie_big_nohaplotig	exon	24652450	24652454	100	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 824 828 +
Chr2	stalkie_big_nohaplotig	exon	24666360	24666433	59	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 757 823 +
Chr2	stalkie_big_nohaplotig	exon	24667384	24667386	100	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 754 756 +
Chr2	stalkie_big_nohaplotig	exon	24667680	24667685	100	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 748 753 +
Chr2	stalkie_big_nohaplotig	exon	24671000	24671007	100	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 711 718 +
Chr2	stalkie_big_nohaplotig	exon	24685728	24685731	100	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 707 710 +
Chr2	stalkie_big_nohaplotig	exon	24688740	24688743	100	-	.	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 703 706 +
Chr2	stalkie_big_nohaplotig	CDS	24539740	24540530	.	-	2	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 2531 3321 +
Chr2	stalkie_big_nohaplotig	CDS	24540606	24541409	.	-	2	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 1727 2530 +
Chr2	stalkie_big_nohaplotig	CDS	24541489	24541581	.	-	2	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 1634 1726 +
Chr2	stalkie_big_nohaplotig	CDS	24542623	24542827	.	-	0	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 1429 1633 +
Chr2	stalkie_big_nohaplotig	CDS	24542892	24543039	.	-	1	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 1281 1428 +
Chr2	stalkie_big_nohaplotig	CDS	24543153	24543295	.	-	0	Parent=FBgn0033897.1.mrna1;Target=FBgn0033897.1 1138 1280 +
Chr2	gffcl	locus	24551178	24552010	.	+	.	ID=RLOC_00015659;geneIDs=comp150638_c0_seq1.path1;transcripts=comp150638_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24551178	24552010	.	+	.	ID=comp150638_c0_seq1.mrna1;geneID=comp150638_c0_seq1.path1;Name=comp150638_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=558;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015659
Chr2	stalkie_big_nohaplotig	exon	24551178	24551302	99	+	.	Parent=comp150638_c0_seq1.mrna1;Target=comp150638_c0_seq1 1 125 +
Chr2	stalkie_big_nohaplotig	exon	24551508	24551558	100	+	.	Parent=comp150638_c0_seq1.mrna1;Target=comp150638_c0_seq1 126 176 +
Chr2	stalkie_big_nohaplotig	exon	24551627	24552010	99	+	.	Parent=comp150638_c0_seq1.mrna1;Target=comp150638_c0_seq1 177 560 +
Chr2	stalkie_big_nohaplotig	CDS	24551511	24551558	.	+	0	Parent=comp150638_c0_seq1.mrna1;Target=comp150638_c0_seq1 129 176 +
Chr2	stalkie_big_nohaplotig	CDS	24551627	24551902	.	+	0	Parent=comp150638_c0_seq1.mrna1;Target=comp150638_c0_seq1 177 452 +
Chr2	gffcl	locus	24657357	24658770	.	+	.	ID=RLOC_00015660;geneIDs=comp156735_c3_seq1.path1;transcripts=comp156735_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24657357	24658770	.	+	.	ID=comp156735_c3_seq1.mrna1;geneID=comp156735_c3_seq1.path1;Name=comp156735_c3_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=1247;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015660
Chr2	stalkie_big_nohaplotig	exon	24657357	24658059	100	+	.	Parent=comp156735_c3_seq1.mrna1;Target=comp156735_c3_seq1 545 1247 -
Chr2	stalkie_big_nohaplotig	exon	24658154	24658423	100	+	.	Parent=comp156735_c3_seq1.mrna1;Target=comp156735_c3_seq1 275 544 -
Chr2	stalkie_big_nohaplotig	exon	24658497	24658770	100	+	.	Parent=comp156735_c3_seq1.mrna1;Target=comp156735_c3_seq1 1 274 -
Chr2	stalkie_big_nohaplotig	CDS	24657357	24658059	.	+	0	Parent=comp156735_c3_seq1.mrna1;Target=comp156735_c3_seq1 545 1247 .
Chr2	stalkie_big_nohaplotig	CDS	24658154	24658423	.	+	2	Parent=comp156735_c3_seq1.mrna1;Target=comp156735_c3_seq1 275 544 .
Chr2	stalkie_big_nohaplotig	CDS	24658497	24658768	.	+	2	Parent=comp156735_c3_seq1.mrna1;Target=comp156735_c3_seq1 3 274 .
Chr2	gffcl	locus	24662554	24663197	.	-	.	ID=RLOC_00015661;geneIDs=comp66738_c0_seq1.path1;transcripts=comp66738_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24662554	24663197	.	-	.	ID=comp66738_c0_seq1.mrna1;geneID=comp66738_c0_seq1.path1;Name=comp66738_c0_seq1;Dir=indeterminatecoverage=97.6;identity=100.0;matches=644;mismatches=0;indels=0;unknowns=0;Target=comp66738_c0_seq1 644 1 .;CDS_Target=comp66738_c0_seq1 245 141 .;locus=RLOC_00015661
Chr2	stalkie_big_nohaplotig	exon	24662554	24663197	100	-	.	Parent=comp66738_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	24662953	24663057	.	-	0	Parent=comp66738_c0_seq1.mrna1
Chr2	gffcl	locus	24670261	24670893	.	+	.	ID=RLOC_00015662;geneIDs=comp1242209_c0_seq1.path1;transcripts=comp1242209_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24670261	24670893	.	+	.	ID=comp1242209_c0_seq1.mrna1;geneID=comp1242209_c0_seq1.path1;Name=comp1242209_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=631;mismatches=2;indels=0;unknowns=0;Target=comp1242209_c0_seq1 633 1 .;CDS_Target=comp1242209_c0_seq1 175 71 .;locus=RLOC_00015662
Chr2	stalkie_big_nohaplotig	exon	24670261	24670893	99	+	.	Parent=comp1242209_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	24670331	24670435	.	+	0	Parent=comp1242209_c0_seq1.mrna1
Chr2	gffcl	locus	24678096	24679235	.	+	.	ID=RLOC_00015663;geneIDs=comp160273_c0_seq1.path1;transcripts=comp160273_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24678096	24679235	.	+	.	ID=comp160273_c0_seq1.mrna1;geneID=comp160273_c0_seq1.path1;Name=comp160273_c0_seq1;Dir=antisensecoverage=99.8;identity=97.0;matches=893;mismatches=13;indels=15;unknowns=0;locus=RLOC_00015663
Chr2	stalkie_big_nohaplotig	exon	24678096	24678244	99	+	.	Parent=comp160273_c0_seq1.mrna1;Target=comp160273_c0_seq1 774 922 -
Chr2	stalkie_big_nohaplotig	exon	24678309	24678637	99	+	.	Parent=comp160273_c0_seq1.mrna1;Target=comp160273_c0_seq1 445 773 -
Chr2	stalkie_big_nohaplotig	exon	24678752	24678991	91	+	.	Parent=comp160273_c0_seq1.mrna1;Target=comp160273_c0_seq1 190 444 -
Chr2	stalkie_big_nohaplotig	exon	24679048	24679235	98	+	.	Parent=comp160273_c0_seq1.mrna1;Target=comp160273_c0_seq1 2 189 -
Chr2	stalkie_big_nohaplotig	CDS	24678171	24678244	.	+	0	Parent=comp160273_c0_seq1.mrna1;Target=comp160273_c0_seq1 774 847 .
Chr2	stalkie_big_nohaplotig	CDS	24678309	24678637	.	+	1	Parent=comp160273_c0_seq1.mrna1;Target=comp160273_c0_seq1 445 773 .
Chr2	stalkie_big_nohaplotig	CDS	24678752	24678991	.	+	2	Parent=comp160273_c0_seq1.mrna1;Target=comp160273_c0_seq1 190 444 .
Chr2	stalkie_big_nohaplotig	CDS	24679048	24679064	.	+	2	Parent=comp160273_c0_seq1.mrna1;Target=comp160273_c0_seq1 173 189 .
Chr2	gffcl	locus	24708917	24709933	.	+	.	ID=RLOC_00015664;geneIDs=FBgn0034422.1.path1;transcripts=FBgn0034422.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24708917	24709933	.	+	.	ID=FBgn0034422.1.mrna1;geneID=FBgn0034422.1.path1;Name=FBgn0034422.1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=1014;mismatches=3;indels=0;unknowns=0;Target=FBgn0034422.1 1020 4 .;locus=RLOC_00015664
Chr2	stalkie_big_nohaplotig	exon	24708917	24709933	99	+	.	Parent=FBgn0034422.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	24708917	24709933	.	+	0	Parent=FBgn0034422.1.mrna1
Chr2	gffcl	locus	24751421	24751663	.	-	.	ID=RLOC_00015665;geneIDs=FBgn0040752.1.path1;transcripts=FBgn0040752.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24751421	24751663	.	-	.	ID=FBgn0040752.1.mrna1;geneID=FBgn0040752.1.path1;Name=FBgn0040752.1;Dir=indeterminatecoverage=6.9;identity=100.0;matches=243;mismatches=0;indels=0;unknowns=0;Target=FBgn0040752.1 243 1 .;locus=RLOC_00015665
Chr2	stalkie_big_nohaplotig	exon	24751421	24751663	100	-	.	Parent=FBgn0040752.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	24751421	24751663	.	-	0	Parent=FBgn0040752.1.mrna1
Chr2	gffcl	locus	24753810	24754448	.	+	.	ID=RLOC_00015666;geneIDs=comp155116_c0_seq1.path1;transcripts=comp155116_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24753810	24754448	.	+	.	ID=comp155116_c0_seq1.mrna1;geneID=comp155116_c0_seq1.path1;Name=comp155116_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=575;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015666
Chr2	stalkie_big_nohaplotig	exon	24753810	24753944	100	+	.	Parent=comp155116_c0_seq1.mrna1;Target=comp155116_c0_seq1 442 576 -
Chr2	stalkie_big_nohaplotig	exon	24754008	24754448	99	+	.	Parent=comp155116_c0_seq1.mrna1;Target=comp155116_c0_seq1 1 441 -
Chr2	stalkie_big_nohaplotig	CDS	24753918	24753944	.	+	0	Parent=comp155116_c0_seq1.mrna1;Target=comp155116_c0_seq1 442 468 .
Chr2	stalkie_big_nohaplotig	CDS	24754008	24754283	.	+	0	Parent=comp155116_c0_seq1.mrna1;Target=comp155116_c0_seq1 166 441 .
Chr2	gffcl	locus	24806359	24820302	.	-	.	ID=RLOC_00015667;geneIDs=comp141201_c0_seq1.path1;transcripts=comp141201_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24806359	24820302	.	-	.	ID=comp141201_c0_seq1.mrna1;geneID=comp141201_c0_seq1.path1;Name=comp141201_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=571;mismatches=0;indels=0;unknowns=0;Target=comp141201_c0_seq1 455 571 .;locus=RLOC_00015667
Chr2	stalkie_big_nohaplotig	exon	24806359	24806381	100	-	.	Parent=comp141201_c0_seq1.mrna1;Target=comp141201_c0_seq1 1 23 -
Chr2	stalkie_big_nohaplotig	exon	24807020	24807296	100	-	.	Parent=comp141201_c0_seq1.mrna1;Target=comp141201_c0_seq1 24 300 -
Chr2	stalkie_big_nohaplotig	exon	24820032	24820302	100	-	.	Parent=comp141201_c0_seq1.mrna1;Target=comp141201_c0_seq1 301 571 -
Chr2	stalkie_big_nohaplotig	CDS	24820186	24820302	.	-	0	Parent=comp141201_c0_seq1.mrna1
Chr2	gffcl	locus	24943386	25116904	.	-	.	ID=RLOC_00015668;geneIDs=comp154499_c0_seq1.path1;transcripts=comp154499_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	24943386	25116904	.	-	.	ID=comp154499_c0_seq1.mrna1;geneID=comp154499_c0_seq1.path1;Name=comp154499_c0_seq1;Dir=antisensecoverage=99.6;identity=99.9;matches=1135;mismatches=0;indels=1;unknowns=0;Target=comp154499_c0_seq1 952 1134 .;locus=RLOC_00015668
Chr2	stalkie_big_nohaplotig	exon	24943386	24943784	99	-	.	Parent=comp154499_c0_seq1.mrna1;Target=comp154499_c0_seq1 1 400 -
Chr2	stalkie_big_nohaplotig	exon	24967300	24967539	100	-	.	Parent=comp154499_c0_seq1.mrna1;Target=comp154499_c0_seq1 401 640 -
Chr2	stalkie_big_nohaplotig	exon	24971081	24971128	100	-	.	Parent=comp154499_c0_seq1.mrna1;Target=comp154499_c0_seq1 641 688 -
Chr2	stalkie_big_nohaplotig	exon	25115542	25115797	100	-	.	Parent=comp154499_c0_seq1.mrna1;Target=comp154499_c0_seq1 689 944 -
Chr2	stalkie_big_nohaplotig	exon	25116713	25116904	100	-	.	Parent=comp154499_c0_seq1.mrna1;Target=comp154499_c0_seq1 945 1136 -
Chr2	stalkie_big_nohaplotig	CDS	25116720	25116902	.	-	0	Parent=comp154499_c0_seq1.mrna1
Chr2	gffcl	locus	25012291	25013246	.	-	.	ID=RLOC_00015669;geneIDs=ORF1914.path1;transcripts=ORF1914.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25012291	25013246	.	-	.	ID=ORF1914.mrna1;geneID=ORF1914.path1;Name=ORF1914;Dir=indeterminatecoverage=100.0;identity=98.8;matches=951;mismatches=5;indels=7;unknowns=0;Target=ORF1914 963 1 .;CDS_Target=ORF1914 44 3 .;locus=RLOC_00015669
Chr2	stalkie_big_nohaplotig	exon	25012291	25013246	98	-	.	Parent=ORF1914.mrna1
Chr2	stalkie_big_nohaplotig	CDS	25013204	25013244	.	-	0	Parent=ORF1914.mrna1
Chr2	gffcl	locus	25040004	25040958	.	+	.	ID=RLOC_00015670;geneIDs=comp160863_c0_seq1.path1;transcripts=comp160863_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25040004	25040958	.	+	.	ID=comp160863_c0_seq1.mrna1;geneID=comp160863_c0_seq1.path1;Name=comp160863_c0_seq1;Dir=antisensecoverage=94.7;identity=97.7;matches=809;mismatches=19;indels=0;unknowns=0;locus=RLOC_00015670
Chr2	stalkie_big_nohaplotig	exon	25040004	25040147	97	+	.	Parent=comp160863_c0_seq1.mrna1;Target=comp160863_c0_seq1 720 863 -
Chr2	stalkie_big_nohaplotig	exon	25040200	25040549	98	+	.	Parent=comp160863_c0_seq1.mrna1;Target=comp160863_c0_seq1 370 719 -
Chr2	stalkie_big_nohaplotig	exon	25040625	25040958	97	+	.	Parent=comp160863_c0_seq1.mrna1;Target=comp160863_c0_seq1 36 369 -
Chr2	stalkie_big_nohaplotig	CDS	25040074	25040147	.	+	0	Parent=comp160863_c0_seq1.mrna1;Target=comp160863_c0_seq1 720 793 .
Chr2	stalkie_big_nohaplotig	CDS	25040200	25040549	.	+	1	Parent=comp160863_c0_seq1.mrna1;Target=comp160863_c0_seq1 370 719 .
Chr2	stalkie_big_nohaplotig	CDS	25040625	25040782	.	+	2	Parent=comp160863_c0_seq1.mrna1;Target=comp160863_c0_seq1 212 369 .
Chr2	gffcl	locus	25050546	25167835	.	+	.	ID=RLOC_00015671;geneIDs=comp156567_c0_seq1.path1;transcripts=comp156567_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25050546	25167835	.	+	.	ID=comp156567_c0_seq1.mrna1;geneID=comp156567_c0_seq1.path1;Name=comp156567_c0_seq1;Dir=indeterminatecoverage=78.7;identity=96.9;matches=1543;mismatches=39;indels=11;unknowns=0;Target=comp156567_c0_seq1 490 425 .;locus=RLOC_00015671
Chr2	stalkie_big_nohaplotig	exon	25050546	25051991	99	+	.	Parent=comp156567_c0_seq1.mrna1;Target=comp156567_c0_seq1 1570 128 .
Chr2	stalkie_big_nohaplotig	exon	25058482	25058485	100	+	.	Parent=comp156567_c0_seq1.mrna1;Target=comp156567_c0_seq1 1594 1591 .
Chr2	stalkie_big_nohaplotig	exon	25066481	25066485	100	+	.	Parent=comp156567_c0_seq1.mrna1;Target=comp156567_c0_seq1 1599 1595 .
Chr2	stalkie_big_nohaplotig	exon	25078424	25078428	100	+	.	Parent=comp156567_c0_seq1.mrna1;Target=comp156567_c0_seq1 1604 1600 .
Chr2	stalkie_big_nohaplotig	exon	25085992	25085997	100	+	.	Parent=comp156567_c0_seq1.mrna1;Target=comp156567_c0_seq1 1610 1605 .
Chr2	stalkie_big_nohaplotig	exon	25138327	25138383	49	+	.	Parent=comp156567_c0_seq1.mrna1;Target=comp156567_c0_seq1 1670 1611 .
Chr2	stalkie_big_nohaplotig	exon	25139402	25139410	100	+	.	Parent=comp156567_c0_seq1.mrna1;Target=comp156567_c0_seq1 1679 1671 .
Chr2	stalkie_big_nohaplotig	exon	25154530	25154539	90	+	.	Parent=comp156567_c0_seq1.mrna1;Target=comp156567_c0_seq1 1689 1680 .
Chr2	stalkie_big_nohaplotig	exon	25159395	25159405	90	+	.	Parent=comp156567_c0_seq1.mrna1;Target=comp156567_c0_seq1 1700 1690 .
Chr2	stalkie_big_nohaplotig	exon	25162741	25162762	72	+	.	Parent=comp156567_c0_seq1.mrna1;Target=comp156567_c0_seq1 1721 1701 .
Chr2	stalkie_big_nohaplotig	exon	25165099	25165104	100	+	.	Parent=comp156567_c0_seq1.mrna1;Target=comp156567_c0_seq1 1727 1722 .
Chr2	stalkie_big_nohaplotig	exon	25167830	25167835	100	+	.	Parent=comp156567_c0_seq1.mrna1;Target=comp156567_c0_seq1 1733 1728 .
Chr2	stalkie_big_nohaplotig	CDS	25050846	25050911	.	+	0	Parent=comp156567_c0_seq1.mrna1
Chr2	gffcl	locus	25118777	25124748	.	+	.	ID=RLOC_00015673;geneIDs=FBgn0038889.path1;transcripts=FBgn0038889.mrna1,FBgn0038889.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25118777	25124748	.	+	.	ID=FBgn0038889.mrna1;geneID=FBgn0038889.path1;Name=FBgn0038889;Dir=sensecoverage=100.0;identity=99.6;matches=2065;mismatches=8;indels=0;unknowns=0;locus=RLOC_00015673
Chr2	stalkie_big_nohaplotig	exon	25118777	25120087	99	+	.	Parent=FBgn0038889.mrna1;Target=FBgn0038889 1 1311 +
Chr2	stalkie_big_nohaplotig	exon	25120145	25120256	100	+	.	Parent=FBgn0038889.mrna1;Target=FBgn0038889 1312 1423 +
Chr2	stalkie_big_nohaplotig	exon	25120328	25120977	99	+	.	Parent=FBgn0038889.mrna1;Target=FBgn0038889 1424 2073 +
Chr2	stalkie_big_nohaplotig	exon	25123415	25123650	99	+	.	Parent=FBgn0038889.mrna1;Target=FBgn0038889 1 237 +
Chr2	stalkie_big_nohaplotig	exon	25123711	25123925	100	+	.	Parent=FBgn0038889.mrna1;Target=FBgn0038889 238 452 +
Chr2	stalkie_big_nohaplotig	exon	25124454	25124748	99	+	.	Parent=FBgn0038889.mrna1;Target=FBgn0038889 453 747 +
Chr2	stalkie_big_nohaplotig	CDS	25118777	25120087	99	+	0	Parent=FBgn0038889.mrna1;Target=FBgn0038889 1 1311 +
Chr2	stalkie_big_nohaplotig	CDS	25120145	25120256	100	+	0	Parent=FBgn0038889.mrna1;Target=FBgn0038889 1312 1423 +
Chr2	stalkie_big_nohaplotig	CDS	25120328	25120977	99	+	1	Parent=FBgn0038889.mrna1;Target=FBgn0038889 1424 2073 +
Chr2	stalkie_big_nohaplotig	CDS	25123417	25123442	96	+	0	Parent=FBgn0038889.mrna1;Target=FBgn0038889 3 29 +
Chr2	stalkie_big_nohaplotig	mRNA	25123415	25124748	.	+	.	ID=FBgn0038889.mrna1;geneID=FBgn0038889.path1;Name=FBgn0038889;Dir=sensecoverage=100.0;identity=99.6;matches=744;mismatches=2;indels=1;unknowns=0;locus=RLOC_00015673
Chr2	stalkie_big_nohaplotig	exon	25123415	25124748	.	+	.	Parent=FBgn0038889.mrna1
Chr2	gffcl	locus	25126609	25132303	.	-	.	ID=RLOC_00015674;geneIDs=FBgn0043550.1.path1;transcripts=FBgn0043550.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25126609	25132303	.	-	.	ID=FBgn0043550.1.mrna1;geneID=FBgn0043550.1.path1;Name=FBgn0043550.1;Dir=sensecoverage=100.0;identity=99.9;matches=1088;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015674
Chr2	stalkie_big_nohaplotig	exon	25126609	25127619	99	-	.	Parent=FBgn0043550.1.mrna1;Target=FBgn0043550.1 79 1089 +
Chr2	stalkie_big_nohaplotig	exon	25132226	25132303	100	-	.	Parent=FBgn0043550.1.mrna1;Target=FBgn0043550.1 1 78 +
Chr2	stalkie_big_nohaplotig	CDS	25126609	25127619	.	-	0	Parent=FBgn0043550.1.mrna1;Target=FBgn0043550.1 79 1089 +
Chr2	stalkie_big_nohaplotig	CDS	25132226	25132303	.	-	0	Parent=FBgn0043550.1.mrna1;Target=FBgn0043550.1 1 78 +
Chr2	gffcl	locus	25139008	25141883	.	-	.	ID=RLOC_00015675;geneIDs=FBgn0031711.1.path1;transcripts=FBgn0031711.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25139008	25141883	.	-	.	ID=FBgn0031711.1.mrna1;geneID=FBgn0031711.1.path1;Name=FBgn0031711.1;Dir=sensecoverage=100.0;identity=99.9;matches=1388;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015675
Chr2	stalkie_big_nohaplotig	exon	25139008	25139105	100	-	.	Parent=FBgn0031711.1.mrna1;Target=FBgn0031711.1 1292 1389 +
Chr2	stalkie_big_nohaplotig	exon	25140375	25140609	100	-	.	Parent=FBgn0031711.1.mrna1;Target=FBgn0031711.1 1057 1291 +
Chr2	stalkie_big_nohaplotig	exon	25140670	25141559	99	-	.	Parent=FBgn0031711.1.mrna1;Target=FBgn0031711.1 167 1056 +
Chr2	stalkie_big_nohaplotig	exon	25141619	25141654	100	-	.	Parent=FBgn0031711.1.mrna1;Target=FBgn0031711.1 131 166 +
Chr2	stalkie_big_nohaplotig	exon	25141754	25141883	100	-	.	Parent=FBgn0031711.1.mrna1;Target=FBgn0031711.1 1 130 +
Chr2	stalkie_big_nohaplotig	CDS	25139008	25139105	.	-	2	Parent=FBgn0031711.1.mrna1;Target=FBgn0031711.1 1292 1389 +
Chr2	stalkie_big_nohaplotig	CDS	25140375	25140609	.	-	0	Parent=FBgn0031711.1.mrna1;Target=FBgn0031711.1 1057 1291 +
Chr2	stalkie_big_nohaplotig	CDS	25140670	25141559	.	-	2	Parent=FBgn0031711.1.mrna1;Target=FBgn0031711.1 167 1056 +
Chr2	stalkie_big_nohaplotig	CDS	25141619	25141654	.	-	2	Parent=FBgn0031711.1.mrna1;Target=FBgn0031711.1 131 166 +
Chr2	stalkie_big_nohaplotig	CDS	25141754	25141883	.	-	0	Parent=FBgn0031711.1.mrna1;Target=FBgn0031711.1 1 130 +
Chr2	gffcl	locus	25151021	25151868	.	-	.	ID=RLOC_00015676;geneIDs=comp147818_c1_seq1.path1;transcripts=comp147818_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25151021	25151868	.	-	.	ID=comp147818_c1_seq1.mrna1;geneID=comp147818_c1_seq1.path1;Name=comp147818_c1_seq1;Dir=indeterminatecoverage=98.0;identity=87.9;matches=768;mismatches=50;indels=56;unknowns=0;Target=comp147818_c1_seq1 859 16 .;CDS_Target=comp147818_c1_seq1 597 418 .;locus=RLOC_00015676
Chr2	stalkie_big_nohaplotig	exon	25151021	25151868	87	-	.	Parent=comp147818_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	25151281	25151436	.	-	0	Parent=comp147818_c1_seq1.mrna1
Chr2	gffcl	locus	25167908	25168885	.	+	.	ID=RLOC_00015677;geneIDs=comp151662_c0_seq1.path1;transcripts=comp151662_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25167908	25168885	.	+	.	ID=comp151662_c0_seq1.mrna1;geneID=comp151662_c0_seq1.path1;Name=comp151662_c0_seq1;Dir=sensecoverage=98.3;identity=99.7;matches=914;mismatches=2;indels=1;unknowns=0;locus=RLOC_00015677
Chr2	stalkie_big_nohaplotig	exon	25167908	25168045	98	+	.	Parent=comp151662_c0_seq1.mrna1;Target=comp151662_c0_seq1 10 148 +
Chr2	stalkie_big_nohaplotig	exon	25168108	25168885	99	+	.	Parent=comp151662_c0_seq1.mrna1;Target=comp151662_c0_seq1 149 926 +
Chr2	stalkie_big_nohaplotig	CDS	25168031	25168045	.	+	0	Parent=comp151662_c0_seq1.mrna1;Target=comp151662_c0_seq1 134 148 +
Chr2	stalkie_big_nohaplotig	CDS	25168108	25168587	.	+	0	Parent=comp151662_c0_seq1.mrna1;Target=comp151662_c0_seq1 149 628 +
Chr2	gffcl	locus	25173085	25173987	.	-	.	ID=RLOC_00015678;geneIDs=comp162171_c0_seq1.path1;transcripts=comp162171_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25173085	25173987	.	-	.	ID=comp162171_c0_seq1.mrna1;geneID=comp162171_c0_seq1.path1;Name=comp162171_c0_seq1;Dir=antisensecoverage=96.4;identity=100.0;matches=845;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015678
Chr2	stalkie_big_nohaplotig	exon	25173085	25173782	100	-	.	Parent=comp162171_c0_seq1.mrna1;Target=comp162171_c0_seq1 1 698 -
Chr2	stalkie_big_nohaplotig	exon	25173841	25173987	100	-	.	Parent=comp162171_c0_seq1.mrna1;Target=comp162171_c0_seq1 699 845 -
Chr2	stalkie_big_nohaplotig	CDS	25173282	25173782	.	-	0	Parent=comp162171_c0_seq1.mrna1;Target=comp162171_c0_seq1 198 698 .
Chr2	stalkie_big_nohaplotig	CDS	25173841	25173855	.	-	0	Parent=comp162171_c0_seq1.mrna1;Target=comp162171_c0_seq1 699 713 .
Chr2	gffcl	locus	25179045	25179872	.	-	.	ID=RLOC_00015679;geneIDs=comp152790_c0_seq1.path1;transcripts=comp152790_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25179045	25179872	.	-	.	ID=comp152790_c0_seq1.mrna1;geneID=comp152790_c0_seq1.path1;Name=comp152790_c0_seq1;Dir=sensecoverage=96.6;identity=99.7;matches=763;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015679
Chr2	stalkie_big_nohaplotig	exon	25179045	25179697	99	-	.	Parent=comp152790_c0_seq1.mrna1;Target=comp152790_c0_seq1 126 778 +
Chr2	stalkie_big_nohaplotig	exon	25179761	25179872	100	-	.	Parent=comp152790_c0_seq1.mrna1;Target=comp152790_c0_seq1 14 125 +
Chr2	stalkie_big_nohaplotig	CDS	25179254	25179697	.	-	0	Parent=comp152790_c0_seq1.mrna1;Target=comp152790_c0_seq1 126 569 +
Chr2	stalkie_big_nohaplotig	CDS	25179761	25179775	.	-	0	Parent=comp152790_c0_seq1.mrna1;Target=comp152790_c0_seq1 111 125 +
Chr2	gffcl	locus	25210735	25211571	.	-	.	ID=RLOC_00015681;geneIDs=ORF3207.path1;transcripts=ORF3207.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25210735	25211571	.	-	.	ID=ORF3207.mrna1;geneID=ORF3207.path1;Name=ORF3207;Dir=sensecoverage=100.0;identity=99.6;matches=753;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015681
Chr2	stalkie_big_nohaplotig	exon	25210735	25211429	99	-	.	Parent=ORF3207.mrna1;Target=ORF3207 62 756 +
Chr2	stalkie_big_nohaplotig	exon	25211511	25211571	98	-	.	Parent=ORF3207.mrna1;Target=ORF3207 1 61 +
Chr2	stalkie_big_nohaplotig	CDS	25210735	25211429	.	-	2	Parent=ORF3207.mrna1;Target=ORF3207 62 756 +
Chr2	stalkie_big_nohaplotig	CDS	25211511	25211571	.	-	0	Parent=ORF3207.mrna1;Target=ORF3207 1 61 +
Chr2	gffcl	locus	25248819	25252591	.	-	.	ID=RLOC_00015682;geneIDs=comp163641_c0_seq1.path1;transcripts=comp163641_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25248819	25252591	.	-	.	ID=comp163641_c0_seq1.mrna1;geneID=comp163641_c0_seq1.path1;Name=comp163641_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=3760;mismatches=13;indels=0;unknowns=0;Target=comp163641_c0_seq1 3773 1 .;CDS_Target=comp163641_c0_seq1 3771 1 .;locus=RLOC_00015682
Chr2	stalkie_big_nohaplotig	exon	25248819	25252591	99	-	.	Parent=comp163641_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	25248821	25252591	.	-	0	Parent=comp163641_c0_seq1.mrna1
Chr2	gffcl	locus	25302263	25303274	.	-	.	ID=RLOC_00015683;geneIDs=comp153207_c0_seq1.path1;transcripts=comp153207_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25302263	25303274	.	-	.	ID=comp153207_c0_seq1.mrna1;geneID=comp153207_c0_seq1.path1;Name=comp153207_c0_seq1;Dir=antisensecoverage=99.8;identity=99.4;matches=946;mismatches=5;indels=1;unknowns=0;locus=RLOC_00015683
Chr2	stalkie_big_nohaplotig	exon	25302263	25303036	99	-	.	Parent=comp153207_c0_seq1.mrna1;Target=comp153207_c0_seq1 3 776 -
Chr2	stalkie_big_nohaplotig	exon	25303098	25303274	98	-	.	Parent=comp153207_c0_seq1.mrna1;Target=comp153207_c0_seq1 777 954 -
Chr2	stalkie_big_nohaplotig	CDS	25302560	25303036	.	-	0	Parent=comp153207_c0_seq1.mrna1;Target=comp153207_c0_seq1 300 776 .
Chr2	stalkie_big_nohaplotig	CDS	25303098	25303124	.	-	0	Parent=comp153207_c0_seq1.mrna1;Target=comp153207_c0_seq1 777 803 .
Chr2	gffcl	locus	25335026	25338510	.	-	.	ID=RLOC_00015685;geneIDs=comp139684_c0_seq1.path1;transcripts=comp139684_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25335026	25338510	.	-	.	ID=comp139684_c0_seq1.mrna1;geneID=comp139684_c0_seq1.path1;Name=comp139684_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=810;mismatches=0;indels=0;unknowns=0;Target=comp139684_c0_seq1 684 809 +;locus=RLOC_00015685
Chr2	stalkie_big_nohaplotig	exon	25335026	25335462	100	-	.	Parent=comp139684_c0_seq1.mrna1;Target=comp139684_c0_seq1 374 810 +
Chr2	stalkie_big_nohaplotig	exon	25338070	25338188	100	-	.	Parent=comp139684_c0_seq1.mrna1;Target=comp139684_c0_seq1 255 373 +
Chr2	stalkie_big_nohaplotig	exon	25338257	25338510	100	-	.	Parent=comp139684_c0_seq1.mrna1;Target=comp139684_c0_seq1 1 254 +
Chr2	stalkie_big_nohaplotig	CDS	25335027	25335152	.	-	0	Parent=comp139684_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25352457	25361127	.	+	.	ID=comp106976_c0_seq1.mrna1;geneID=comp106976_c0_seq1.path1;Name=comp106976_c0_seq1;Dir=sensecoverage=99.6;identity=98.7;matches=229;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015686
Chr2	stalkie_big_nohaplotig	exon	25352457	25352479	100	+	.	Parent=comp106976_c0_seq1.mrna1;Target=comp106976_c0_seq1 1 23 +
Chr2	stalkie_big_nohaplotig	exon	25360919	25361127	98	+	.	Parent=comp106976_c0_seq1.mrna1;Target=comp106976_c0_seq1 24 232 +
Chr2	stalkie_big_nohaplotig	CDS	25352459	25352479	.	+	0	Parent=comp106976_c0_seq1.mrna1;Target=comp106976_c0_seq1 3 23 +
Chr2	stalkie_big_nohaplotig	CDS	25360919	25360981	.	+	0	Parent=comp106976_c0_seq1.mrna1;Target=comp106976_c0_seq1 24 86 +
Chr2	gffcl	locus	25369606	25375331	.	+	.	ID=RLOC_00015687;geneIDs=FBgn0001325.1.path1;transcripts=FBgn0001325.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25369606	25375331	.	+	.	ID=FBgn0001325.1.mrna1;geneID=FBgn0001325.1.path1;Name=FBgn0001325.1;Dir=sensecoverage=100.0;identity=100.0;matches=1638;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015687
Chr2	stalkie_big_nohaplotig	exon	25369606	25369699	100	+	.	Parent=FBgn0001325.1.mrna1;Target=FBgn0001325.1 1 94 +
Chr2	stalkie_big_nohaplotig	exon	25373788	25375331	100	+	.	Parent=FBgn0001325.1.mrna1;Target=FBgn0001325.1 95 1638 +
Chr2	stalkie_big_nohaplotig	CDS	25369606	25369699	.	+	0	Parent=FBgn0001325.1.mrna1;Target=FBgn0001325.1 1 94 +
Chr2	stalkie_big_nohaplotig	CDS	25373788	25375331	.	+	2	Parent=FBgn0001325.1.mrna1;Target=FBgn0001325.1 95 1638 +
Chr2	gffcl	locus	25467675	25476587	.	-	.	ID=RLOC_00015688;geneIDs=FBgn0053680.1.path1;transcripts=FBgn0053680.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25467675	25476587	.	-	.	ID=FBgn0053680.1.mrna1;geneID=FBgn0053680.1.path1;Name=FBgn0053680.1;Dir=sensecoverage=100.0;identity=99.9;matches=737;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015688
Chr2	stalkie_big_nohaplotig	exon	25467675	25467973	100	-	.	Parent=FBgn0053680.1.mrna1;Target=FBgn0053680.1 440 738 +
Chr2	stalkie_big_nohaplotig	exon	25468043	25468176	99	-	.	Parent=FBgn0053680.1.mrna1;Target=FBgn0053680.1 306 439 +
Chr2	stalkie_big_nohaplotig	exon	25468356	25468593	100	-	.	Parent=FBgn0053680.1.mrna1;Target=FBgn0053680.1 68 305 +
Chr2	stalkie_big_nohaplotig	exon	25476521	25476587	100	-	.	Parent=FBgn0053680.1.mrna1;Target=FBgn0053680.1 1 67 +
Chr2	stalkie_big_nohaplotig	CDS	25467675	25467973	.	-	2	Parent=FBgn0053680.1.mrna1;Target=FBgn0053680.1 440 738 +
Chr2	stalkie_big_nohaplotig	CDS	25468043	25468176	.	-	1	Parent=FBgn0053680.1.mrna1;Target=FBgn0053680.1 306 439 +
Chr2	stalkie_big_nohaplotig	CDS	25468356	25468593	.	-	2	Parent=FBgn0053680.1.mrna1;Target=FBgn0053680.1 68 305 +
Chr2	stalkie_big_nohaplotig	CDS	25476521	25476587	.	-	0	Parent=FBgn0053680.1.mrna1;Target=FBgn0053680.1 1 67 +
Chr2	gffcl	locus	25486598	25493070	.	-	.	ID=RLOC_00015689;geneIDs=FBgn0033354.1.path1;transcripts=FBgn0033354.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25486598	25493070	.	-	.	ID=FBgn0033354.1.mrna1;geneID=FBgn0033354.1.path1;Name=FBgn0033354.1;Dir=sensecoverage=100.0;identity=99.6;matches=3131;mismatches=12;indels=1;unknowns=0;locus=RLOC_00015689
Chr2	stalkie_big_nohaplotig	exon	25486598	25486913	99	-	.	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 2828 3144 +
Chr2	stalkie_big_nohaplotig	exon	25486983	25487317	100	-	.	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 2493 2827 +
Chr2	stalkie_big_nohaplotig	exon	25488024	25488187	98	-	.	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 2329 2492 +
Chr2	stalkie_big_nohaplotig	exon	25488250	25488414	99	-	.	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 2164 2328 +
Chr2	stalkie_big_nohaplotig	exon	25488898	25489226	99	-	.	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 1835 2163 +
Chr2	stalkie_big_nohaplotig	exon	25489289	25489554	100	-	.	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 1569 1834 +
Chr2	stalkie_big_nohaplotig	exon	25489620	25489732	100	-	.	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 1456 1568 +
Chr2	stalkie_big_nohaplotig	exon	25490582	25490670	100	-	.	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 1367 1455 +
Chr2	stalkie_big_nohaplotig	exon	25490726	25491176	100	-	.	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 916 1366 +
Chr2	stalkie_big_nohaplotig	exon	25491835	25491944	100	-	.	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 806 915 +
Chr2	stalkie_big_nohaplotig	exon	25492065	25492300	100	-	.	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 570 805 +
Chr2	stalkie_big_nohaplotig	exon	25492361	25492528	100	-	.	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 402 569 +
Chr2	stalkie_big_nohaplotig	exon	25492594	25492880	98	-	.	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 115 401 +
Chr2	stalkie_big_nohaplotig	exon	25492957	25493070	98	-	.	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 1 114 +
Chr2	stalkie_big_nohaplotig	CDS	25486598	25486913	.	-	2	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 2828 3144 +
Chr2	stalkie_big_nohaplotig	CDS	25486983	25487317	.	-	1	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 2493 2827 +
Chr2	stalkie_big_nohaplotig	CDS	25488024	25488187	.	-	0	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 2329 2492 +
Chr2	stalkie_big_nohaplotig	CDS	25488250	25488414	.	-	0	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 2164 2328 +
Chr2	stalkie_big_nohaplotig	CDS	25488898	25489226	.	-	2	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 1835 2163 +
Chr2	stalkie_big_nohaplotig	CDS	25489289	25489554	.	-	1	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 1569 1834 +
Chr2	stalkie_big_nohaplotig	CDS	25489620	25489732	.	-	0	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 1456 1568 +
Chr2	stalkie_big_nohaplotig	CDS	25490582	25490670	.	-	2	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 1367 1455 +
Chr2	stalkie_big_nohaplotig	CDS	25490726	25491176	.	-	0	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 916 1366 +
Chr2	stalkie_big_nohaplotig	CDS	25491835	25491944	.	-	2	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 806 915 +
Chr2	stalkie_big_nohaplotig	CDS	25492065	25492300	.	-	1	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 570 805 +
Chr2	stalkie_big_nohaplotig	CDS	25492361	25492528	.	-	1	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 402 569 +
Chr2	stalkie_big_nohaplotig	CDS	25492594	25492880	.	-	0	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 115 401 +
Chr2	stalkie_big_nohaplotig	CDS	25492957	25493070	.	-	0	Parent=FBgn0033354.1.mrna1;Target=FBgn0033354.1 1 114 +
Chr2	gffcl	locus	25503047	25503289	.	-	.	ID=RLOC_00015691;geneIDs=comp135712_c0_seq1.path1;transcripts=comp135712_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25503047	25503289	.	-	.	ID=comp135712_c0_seq1.mrna1;geneID=comp135712_c0_seq1.path1;Name=comp135712_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=235;mismatches=2;indels=6;unknowns=0;Target=comp135712_c0_seq1 237 1 .;CDS_Target=comp135712_c0_seq1 221 135 .;locus=RLOC_00015691
Chr2	stalkie_big_nohaplotig	exon	25503047	25503289	96	-	.	Parent=comp135712_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	25503063	25503149	.	-	0	Parent=comp135712_c0_seq1.mrna1
Chr2	gffcl	locus	25503944	25504360	.	-	.	ID=RLOC_00015692;geneIDs=comp155552_c0_seq1.path1;transcripts=comp155552_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25503944	25504360	.	-	.	ID=comp155552_c0_seq1.mrna1;geneID=comp155552_c0_seq1.path1;Name=comp155552_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.3;matches=414;mismatches=3;indels=0;unknowns=0;Target=comp155552_c0_seq1 417 1 .;CDS_Target=comp155552_c0_seq1 252 1 .;locus=RLOC_00015692
Chr2	stalkie_big_nohaplotig	exon	25503944	25504360	99	-	.	Parent=comp155552_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	25504109	25504360	.	-	0	Parent=comp155552_c0_seq1.mrna1
Chr2	gffcl	locus	25518955	25520112	.	-	.	ID=RLOC_00015693;geneIDs=comp154021_c0_seq1.path1;transcripts=comp154021_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25518955	25520112	.	-	.	ID=comp154021_c0_seq1.mrna1;geneID=comp154021_c0_seq1.path1;Name=comp154021_c0_seq1;Dir=indeterminatecoverage=97.5;identity=96.7;matches=1126;mismatches=32;indels=6;unknowns=0;Target=comp154021_c0_seq1 1183 20 .;CDS_Target=comp154021_c0_seq1 126 22 .;locus=RLOC_00015693
Chr2	stalkie_big_nohaplotig	exon	25518955	25520112	96	-	.	Parent=comp154021_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	25520006	25520110	.	-	0	Parent=comp154021_c0_seq1.mrna1
Chr2	gffcl	locus	25539558	25543773	.	-	.	ID=RLOC_00015694;geneIDs=FBgn0034418.1.path1;transcripts=FBgn0034418.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25539558	25543773	.	-	.	ID=FBgn0034418.1.mrna1;geneID=FBgn0034418.1.path1;Name=FBgn0034418.1;Dir=sensecoverage=100.0;identity=99.8;matches=1892;mismatches=4;indels=0;unknowns=0;locus=RLOC_00015694
Chr2	stalkie_big_nohaplotig	exon	25539558	25539759	100	-	.	Parent=FBgn0034418.1.mrna1;Target=FBgn0034418.1 1695 1896 +
Chr2	stalkie_big_nohaplotig	exon	25540285	25540492	100	-	.	Parent=FBgn0034418.1.mrna1;Target=FBgn0034418.1 1487 1694 +
Chr2	stalkie_big_nohaplotig	exon	25540949	25541279	100	-	.	Parent=FBgn0034418.1.mrna1;Target=FBgn0034418.1 1156 1486 +
Chr2	stalkie_big_nohaplotig	exon	25541557	25541730	100	-	.	Parent=FBgn0034418.1.mrna1;Target=FBgn0034418.1 982 1155 +
Chr2	stalkie_big_nohaplotig	exon	25541789	25541869	98	-	.	Parent=FBgn0034418.1.mrna1;Target=FBgn0034418.1 901 981 +
Chr2	stalkie_big_nohaplotig	exon	25542355	25542671	100	-	.	Parent=FBgn0034418.1.mrna1;Target=FBgn0034418.1 584 900 +
Chr2	stalkie_big_nohaplotig	exon	25542734	25542877	98	-	.	Parent=FBgn0034418.1.mrna1;Target=FBgn0034418.1 440 583 +
Chr2	stalkie_big_nohaplotig	exon	25542951	25543121	99	-	.	Parent=FBgn0034418.1.mrna1;Target=FBgn0034418.1 269 439 +
Chr2	stalkie_big_nohaplotig	exon	25543207	25543339	100	-	.	Parent=FBgn0034418.1.mrna1;Target=FBgn0034418.1 136 268 +
Chr2	stalkie_big_nohaplotig	exon	25543639	25543773	100	-	.	Parent=FBgn0034418.1.mrna1;Target=FBgn0034418.1 1 135 +
Chr2	stalkie_big_nohaplotig	CDS	25539558	25539759	.	-	1	Parent=FBgn0034418.1.mrna1;Target=FBgn0034418.1 1695 1896 +
Chr2	stalkie_big_nohaplotig	CDS	25540285	25540492	.	-	2	Parent=FBgn0034418.1.mrna1;Target=FBgn0034418.1 1487 1694 +
Chr2	stalkie_big_nohaplotig	CDS	25540949	25541279	.	-	0	Parent=FBgn0034418.1.mrna1;Target=FBgn0034418.1 1156 1486 +
Chr2	stalkie_big_nohaplotig	CDS	25541557	25541730	.	-	0	Parent=FBgn0034418.1.mrna1;Target=FBgn0034418.1 982 1155 +
Chr2	stalkie_big_nohaplotig	CDS	25541789	25541869	.	-	0	Parent=FBgn0034418.1.mrna1;Target=FBgn0034418.1 901 981 +
Chr2	stalkie_big_nohaplotig	CDS	25542355	25542671	.	-	2	Parent=FBgn0034418.1.mrna1;Target=FBgn0034418.1 584 900 +
Chr2	stalkie_big_nohaplotig	CDS	25542734	25542877	.	-	2	Parent=FBgn0034418.1.mrna1;Target=FBgn0034418.1 440 583 +
Chr2	stalkie_big_nohaplotig	CDS	25542951	25543121	.	-	2	Parent=FBgn0034418.1.mrna1;Target=FBgn0034418.1 269 439 +
Chr2	stalkie_big_nohaplotig	CDS	25543207	25543339	.	-	0	Parent=FBgn0034418.1.mrna1;Target=FBgn0034418.1 136 268 +
Chr2	stalkie_big_nohaplotig	CDS	25543639	25543773	.	-	0	Parent=FBgn0034418.1.mrna1;Target=FBgn0034418.1 1 135 +
Chr2	gffcl	locus	25560216	25567091	.	+	.	ID=RLOC_00015696;geneIDs=FBgn0034419.1.path1;transcripts=FBgn0034419.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25560216	25567091	.	+	.	ID=FBgn0034419.1.mrna1;geneID=FBgn0034419.1.path1;Name=FBgn0034419.1;Dir=sensecoverage=100.0;identity=99.9;matches=1360;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015696
Chr2	stalkie_big_nohaplotig	exon	25560216	25560436	99	+	.	Parent=FBgn0034419.1.mrna1;Target=FBgn0034419.1 1 221 +
Chr2	stalkie_big_nohaplotig	exon	25565756	25565874	100	+	.	Parent=FBgn0034419.1.mrna1;Target=FBgn0034419.1 222 340 +
Chr2	stalkie_big_nohaplotig	exon	25565941	25566125	99	+	.	Parent=FBgn0034419.1.mrna1;Target=FBgn0034419.1 341 525 +
Chr2	stalkie_big_nohaplotig	exon	25566191	25566703	100	+	.	Parent=FBgn0034419.1.mrna1;Target=FBgn0034419.1 526 1038 +
Chr2	stalkie_big_nohaplotig	exon	25566768	25567091	100	+	.	Parent=FBgn0034419.1.mrna1;Target=FBgn0034419.1 1039 1362 +
Chr2	stalkie_big_nohaplotig	CDS	25560216	25560436	.	+	0	Parent=FBgn0034419.1.mrna1;Target=FBgn0034419.1 1 221 +
Chr2	stalkie_big_nohaplotig	CDS	25565756	25565874	.	+	1	Parent=FBgn0034419.1.mrna1;Target=FBgn0034419.1 222 340 +
Chr2	stalkie_big_nohaplotig	CDS	25565941	25566125	.	+	2	Parent=FBgn0034419.1.mrna1;Target=FBgn0034419.1 341 525 +
Chr2	stalkie_big_nohaplotig	CDS	25566191	25566703	.	+	0	Parent=FBgn0034419.1.mrna1;Target=FBgn0034419.1 526 1038 +
Chr2	stalkie_big_nohaplotig	CDS	25566768	25567091	.	+	0	Parent=FBgn0034419.1.mrna1;Target=FBgn0034419.1 1039 1362 +
Chr2	gffcl	locus	25594309	25594735	.	-	.	ID=RLOC_00015697;geneIDs=comp79543_c0_seq1.path1;transcripts=comp79543_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25594309	25594735	.	-	.	ID=comp79543_c0_seq1.mrna1;geneID=comp79543_c0_seq1.path1;Name=comp79543_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=427;mismatches=0;indels=0;unknowns=0;Target=comp79543_c0_seq1 427 1 .;CDS_Target=comp79543_c0_seq1 162 55 .;locus=RLOC_00015697
Chr2	stalkie_big_nohaplotig	exon	25594309	25594735	100	-	.	Parent=comp79543_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	25594574	25594681	.	-	0	Parent=comp79543_c0_seq1.mrna1
Chr2	gffcl	locus	25627458	25627924	.	+	.	ID=RLOC_00015698;geneIDs=comp918658_c0_seq1.path1;transcripts=comp918658_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25627458	25627924	.	+	.	ID=comp918658_c0_seq1.mrna1;geneID=comp918658_c0_seq1.path1;Name=comp918658_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.6;matches=465;mismatches=2;indels=0;unknowns=0;Target=comp918658_c0_seq1 468 2 .;CDS_Target=comp918658_c0_seq1 392 216 .;locus=RLOC_00015698
Chr2	stalkie_big_nohaplotig	exon	25627458	25627924	99	+	.	Parent=comp918658_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	25627672	25627848	.	+	0	Parent=comp918658_c0_seq1.mrna1
Chr2	gffcl	locus	25635365	25644215	.	+	.	ID=RLOC_00015699;geneIDs=ORF1261.path1,FBgn0000578.path1;transcripts=ORF1261.mrna1,FBgn0000578.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25635365	25643039	.	+	.	ID=ORF1261.mrna1;geneID=ORF1261.path1;Name=ORF1261;Dir=sensecoverage=100.0;identity=99.9;matches=1160;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015699
Chr2	stalkie_big_nohaplotig	exon	25635365	25636503	99	+	.	Parent=ORF1261.mrna1;Target=ORF1261 1 1139 +
Chr2	stalkie_big_nohaplotig	exon	25643018	25643039	100	+	.	Parent=ORF1261.mrna1;Target=ORF1261 1140 1161 +
Chr2	stalkie_big_nohaplotig	CDS	25635365	25636503	.	+	0	Parent=ORF1261.mrna1;Target=ORF1261 1 1139 +
Chr2	stalkie_big_nohaplotig	CDS	25643018	25643039	.	+	1	Parent=ORF1261.mrna1;Target=ORF1261 1140 1161 +
Chr2	stalkie_big_nohaplotig	mRNA	25643018	25644215	.	+	.	ID=FBgn0000578.mrna1;geneID=FBgn0000578.path1;Name=FBgn0000578;Dir=sensecoverage=97.8;identity=100.0;matches=739;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015699
Chr2	stalkie_big_nohaplotig	exon	25643018	25643339	100	+	.	Parent=FBgn0000578.mrna1;Target=FBgn0000578 18 339 +
Chr2	stalkie_big_nohaplotig	exon	25643409	25643635	100	+	.	Parent=FBgn0000578.mrna1;Target=FBgn0000578 340 566 +
Chr2	stalkie_big_nohaplotig	exon	25644026	25644215	100	+	.	Parent=FBgn0000578.mrna1;Target=FBgn0000578 567 756 +
Chr2	stalkie_big_nohaplotig	CDS	25643019	25643339	.	+	0	Parent=FBgn0000578.mrna1;Target=FBgn0000578 19 339 +
Chr2	stalkie_big_nohaplotig	CDS	25643409	25643635	.	+	0	Parent=FBgn0000578.mrna1;Target=FBgn0000578 340 566 +
Chr2	stalkie_big_nohaplotig	CDS	25644026	25644215	.	+	1	Parent=FBgn0000578.mrna1;Target=FBgn0000578 567 756 +
Chr2	gffcl	locus	25645769	25653410	.	+	.	ID=RLOC_00015700;geneIDs=comp156878_c0_seq1.path1;transcripts=comp156878_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25645769	25653410	.	+	.	ID=comp156878_c0_seq1.mrna1;geneID=comp156878_c0_seq1.path1;Name=comp156878_c0_seq1;Dir=sensecoverage=100.0;identity=98.2;matches=2454;mismatches=34;indels=11;unknowns=0;locus=RLOC_00015700
Chr2	stalkie_big_nohaplotig	exon	25645769	25646862	100	+	.	Parent=comp156878_c0_seq1.mrna1;Target=comp156878_c0_seq1 1 1094 +
Chr2	stalkie_big_nohaplotig	exon	25646922	25647080	100	+	.	Parent=comp156878_c0_seq1.mrna1;Target=comp156878_c0_seq1 1095 1253 +
Chr2	stalkie_big_nohaplotig	exon	25647141	25647323	100	+	.	Parent=comp156878_c0_seq1.mrna1;Target=comp156878_c0_seq1 1254 1436 +
Chr2	stalkie_big_nohaplotig	exon	25648578	25648698	100	+	.	Parent=comp156878_c0_seq1.mrna1;Target=comp156878_c0_seq1 1437 1557 +
Chr2	stalkie_big_nohaplotig	exon	25648767	25648791	100	+	.	Parent=comp156878_c0_seq1.mrna1;Target=comp156878_c0_seq1 1558 1582 +
Chr2	stalkie_big_nohaplotig	exon	25652502	25653410	95	+	.	Parent=comp156878_c0_seq1.mrna1;Target=comp156878_c0_seq1 1583 2496 +
Chr2	stalkie_big_nohaplotig	CDS	25646227	25646862	.	+	0	Parent=comp156878_c0_seq1.mrna1;Target=comp156878_c0_seq1 459 1094 +
Chr2	stalkie_big_nohaplotig	CDS	25646922	25647080	.	+	0	Parent=comp156878_c0_seq1.mrna1;Target=comp156878_c0_seq1 1095 1253 +
Chr2	stalkie_big_nohaplotig	CDS	25647141	25647323	.	+	0	Parent=comp156878_c0_seq1.mrna1;Target=comp156878_c0_seq1 1254 1436 +
Chr2	stalkie_big_nohaplotig	CDS	25648578	25648698	.	+	0	Parent=comp156878_c0_seq1.mrna1;Target=comp156878_c0_seq1 1437 1557 +
Chr2	stalkie_big_nohaplotig	CDS	25648767	25648791	.	+	2	Parent=comp156878_c0_seq1.mrna1;Target=comp156878_c0_seq1 1558 1582 +
Chr2	stalkie_big_nohaplotig	CDS	25652502	25652514	.	+	1	Parent=comp156878_c0_seq1.mrna1;Target=comp156878_c0_seq1 1583 1595 +
Chr2	gffcl	locus	25695023	25695437	.	+	.	ID=RLOC_00015701;geneIDs=comp88107_c0_seq1.path1;transcripts=comp88107_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25695023	25695437	.	+	.	ID=comp88107_c0_seq1.mrna1;geneID=comp88107_c0_seq1.path1;Name=comp88107_c0_seq1;Dir=indeterminatecoverage=89.1;identity=99.8;matches=415;mismatches=0;indels=1;unknowns=0;Target=comp88107_c0_seq1 467 52 .;CDS_Target=comp88107_c0_seq1 215 54 .;locus=RLOC_00015701
Chr2	stalkie_big_nohaplotig	exon	25695023	25695437	99	+	.	Parent=comp88107_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	25695025	25695186	.	+	0	Parent=comp88107_c0_seq1.mrna1
Chr2	gffcl	locus	25697388	25721906	.	.	.	ID=RLOC_00015702;geneIDs=FBgn0034420.1.path1,comp152926_c0_seq1.path1,comp160083_c1_seq1.path1;transcripts=FBgn0034420.1.mrna1,comp160083_c1_seq1.mrna1,comp152926_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25697388	25715589	.	+	.	ID=FBgn0034420.1.mrna1;geneID=FBgn0034420.1.path1;Name=FBgn0034420.1;Dir=sensecoverage=99.9;identity=100.0;matches=2873;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015702
Chr2	stalkie_big_nohaplotig	exon	25697388	25697656	100	+	.	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 5 273 +
Chr2	stalkie_big_nohaplotig	exon	25697721	25697906	100	+	.	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 274 459 +
Chr2	stalkie_big_nohaplotig	exon	25697969	25698091	100	+	.	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 460 582 +
Chr2	stalkie_big_nohaplotig	exon	25702393	25702494	100	+	.	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 583 684 +
Chr2	stalkie_big_nohaplotig	exon	25702716	25702895	100	+	.	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 685 864 +
Chr2	stalkie_big_nohaplotig	exon	25702960	25703169	100	+	.	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 865 1074 +
Chr2	stalkie_big_nohaplotig	exon	25705472	25705677	100	+	.	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 1075 1280 +
Chr2	stalkie_big_nohaplotig	exon	25705802	25706213	100	+	.	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 1281 1692 +
Chr2	stalkie_big_nohaplotig	exon	25707590	25707616	100	+	.	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 1693 1719 +
Chr2	stalkie_big_nohaplotig	exon	25707903	25708184	100	+	.	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 1720 2001 +
Chr2	stalkie_big_nohaplotig	exon	25709808	25710216	100	+	.	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 2002 2410 +
Chr2	stalkie_big_nohaplotig	exon	25712450	25712603	100	+	.	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 2411 2564 +
Chr2	stalkie_big_nohaplotig	exon	25712933	25713040	100	+	.	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 2565 2672 +
Chr2	stalkie_big_nohaplotig	exon	25713135	25713290	100	+	.	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 2673 2828 +
Chr2	stalkie_big_nohaplotig	exon	25715541	25715589	100	+	.	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 2829 2877 +
Chr2	stalkie_big_nohaplotig	CDS	25697390	25697656	.	+	0	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 7 273 +
Chr2	stalkie_big_nohaplotig	CDS	25697721	25697906	.	+	0	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 274 459 +
Chr2	stalkie_big_nohaplotig	CDS	25697969	25698091	.	+	0	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 460 582 +
Chr2	stalkie_big_nohaplotig	CDS	25702393	25702494	.	+	0	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 583 684 +
Chr2	stalkie_big_nohaplotig	CDS	25702716	25702895	.	+	0	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 685 864 +
Chr2	stalkie_big_nohaplotig	CDS	25702960	25703169	.	+	0	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 865 1074 +
Chr2	stalkie_big_nohaplotig	CDS	25705472	25705677	.	+	0	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 1075 1280 +
Chr2	stalkie_big_nohaplotig	CDS	25705802	25706213	.	+	1	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 1281 1692 +
Chr2	stalkie_big_nohaplotig	CDS	25707590	25707616	.	+	0	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 1693 1719 +
Chr2	stalkie_big_nohaplotig	CDS	25707903	25708184	.	+	0	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 1720 2001 +
Chr2	stalkie_big_nohaplotig	CDS	25709808	25710216	.	+	0	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 2002 2410 +
Chr2	stalkie_big_nohaplotig	CDS	25712450	25712603	.	+	2	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 2411 2564 +
Chr2	stalkie_big_nohaplotig	CDS	25712933	25713040	.	+	1	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 2565 2672 +
Chr2	stalkie_big_nohaplotig	CDS	25713135	25713290	.	+	1	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 2673 2828 +
Chr2	stalkie_big_nohaplotig	CDS	25715541	25715589	.	+	1	Parent=FBgn0034420.1.mrna1;Target=FBgn0034420.1 2829 2877 +
Chr2	stalkie_big_nohaplotig	mRNA	25697388	25721906	.	+	.	ID=comp160083_c1_seq1.mrna1;geneID=comp160083_c1_seq1.path1;Name=comp160083_c1_seq1;Dir=antisensecoverage=95.2;identity=99.9;matches=3553;mismatches=4;indels=0;unknowns=0;locus=RLOC_00015702
Chr2	stalkie_big_nohaplotig	exon	25697388	25697656	100	+	.	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 3289 3557 -
Chr2	stalkie_big_nohaplotig	exon	25697721	25697906	100	+	.	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 3103 3288 -
Chr2	stalkie_big_nohaplotig	exon	25697969	25698091	100	+	.	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 2980 3102 -
Chr2	stalkie_big_nohaplotig	exon	25702393	25702494	100	+	.	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 2878 2979 -
Chr2	stalkie_big_nohaplotig	exon	25702716	25702895	100	+	.	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 2698 2877 -
Chr2	stalkie_big_nohaplotig	exon	25702960	25703169	100	+	.	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 2488 2697 -
Chr2	stalkie_big_nohaplotig	exon	25705472	25705677	100	+	.	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 2282 2487 -
Chr2	stalkie_big_nohaplotig	exon	25705802	25706213	100	+	.	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 1870 2281 -
Chr2	stalkie_big_nohaplotig	exon	25707590	25707616	100	+	.	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 1843 1869 -
Chr2	stalkie_big_nohaplotig	exon	25707903	25708184	100	+	.	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 1561 1842 -
Chr2	stalkie_big_nohaplotig	exon	25709808	25710216	100	+	.	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 1152 1560 -
Chr2	stalkie_big_nohaplotig	exon	25712450	25712603	100	+	.	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 998 1151 -
Chr2	stalkie_big_nohaplotig	exon	25712933	25713040	100	+	.	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 890 997 -
Chr2	stalkie_big_nohaplotig	exon	25713135	25713290	100	+	.	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 734 889 -
Chr2	stalkie_big_nohaplotig	exon	25721174	25721906	99	+	.	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 1 733 -
Chr2	stalkie_big_nohaplotig	CDS	25697390	25697656	.	+	0	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 3289 3555 .
Chr2	stalkie_big_nohaplotig	CDS	25697721	25697906	.	+	0	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 3103 3288 .
Chr2	stalkie_big_nohaplotig	CDS	25697969	25698091	.	+	0	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 2980 3102 .
Chr2	stalkie_big_nohaplotig	CDS	25702393	25702494	.	+	0	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 2878 2979 .
Chr2	stalkie_big_nohaplotig	CDS	25702716	25702895	.	+	0	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 2698 2877 .
Chr2	stalkie_big_nohaplotig	CDS	25702960	25703169	.	+	0	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 2488 2697 .
Chr2	stalkie_big_nohaplotig	CDS	25705472	25705677	.	+	0	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 2282 2487 .
Chr2	stalkie_big_nohaplotig	CDS	25705802	25706213	.	+	1	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 1870 2281 .
Chr2	stalkie_big_nohaplotig	CDS	25707590	25707616	.	+	0	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 1843 1869 .
Chr2	stalkie_big_nohaplotig	CDS	25707903	25708184	.	+	0	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 1561 1842 .
Chr2	stalkie_big_nohaplotig	CDS	25709808	25710216	.	+	0	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 1152 1560 .
Chr2	stalkie_big_nohaplotig	CDS	25712450	25712603	.	+	2	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 998 1151 .
Chr2	stalkie_big_nohaplotig	CDS	25712933	25713040	.	+	1	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 890 997 .
Chr2	stalkie_big_nohaplotig	CDS	25713135	25713290	.	+	1	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 734 889 .
Chr2	stalkie_big_nohaplotig	CDS	25721174	25721222	.	+	1	Parent=comp160083_c1_seq1.mrna1;Target=comp160083_c1_seq1 685 733 .
Chr2	stalkie_big_nohaplotig	mRNA	25720509	25721195	.	-	.	ID=comp152926_c0_seq1.mrna1;geneID=comp152926_c0_seq1.path1;Name=comp152926_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=687;mismatches=0;indels=0;unknowns=0;Target=comp152926_c0_seq1 687 1 .;CDS_Target=comp152926_c0_seq1 97 2 .;locus=RLOC_00015702
Chr2	stalkie_big_nohaplotig	exon	25720509	25721195	100	-	.	Parent=comp152926_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	25721099	25721194	.	-	0	Parent=comp152926_c0_seq1.mrna1
Chr2	gffcl	locus	25710604	25711102	.	+	.	ID=RLOC_00015703;geneIDs=comp154288_c1_seq1.path1;transcripts=comp154288_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25710604	25711102	.	+	.	ID=comp154288_c1_seq1.mrna1;geneID=comp154288_c1_seq1.path1;Name=comp154288_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=499;mismatches=0;indels=0;unknowns=0;Target=comp154288_c1_seq1 499 1 .;CDS_Target=comp154288_c1_seq1 443 336 .;locus=RLOC_00015703
Chr2	stalkie_big_nohaplotig	exon	25710604	25711102	100	+	.	Parent=comp154288_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	25710939	25711046	.	+	0	Parent=comp154288_c1_seq1.mrna1
Chr2	gffcl	locus	25719124	25720248	.	+	.	ID=RLOC_00015704;geneIDs=comp154544_c0_seq1.path1;transcripts=comp154544_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25719124	25720248	.	+	.	ID=comp154544_c0_seq1.mrna1;geneID=comp154544_c0_seq1.path1;Name=comp154544_c0_seq1;Dir=indeterminatecoverage=89.5;identity=99.2;matches=1116;mismatches=8;indels=1;unknowns=0;Target=comp154544_c0_seq1 1155 32 .;CDS_Target=comp154544_c0_seq1 144 34 .;locus=RLOC_00015704
Chr2	stalkie_big_nohaplotig	exon	25719124	25720248	99	+	.	Parent=comp154544_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	25719126	25719236	.	+	0	Parent=comp154544_c0_seq1.mrna1
Chr2	gffcl	locus	25744113	25744753	.	-	.	ID=RLOC_00015706;geneIDs=comp136327_c0_seq1.path1;transcripts=comp136327_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25744113	25744753	.	-	.	ID=comp136327_c0_seq1.mrna1;geneID=comp136327_c0_seq1.path1;Name=comp136327_c0_seq1;Dir=indeterminatecoverage=98.8;identity=97.7;matches=626;mismatches=9;indels=6;unknowns=0;Target=comp136327_c0_seq1 642 8 .;CDS_Target=comp136327_c0_seq1 505 356 .;locus=RLOC_00015706
Chr2	stalkie_big_nohaplotig	exon	25744113	25744753	97	-	.	Parent=comp136327_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	25744256	25744405	.	-	0	Parent=comp136327_c0_seq1.mrna1
Chr2	gffcl	locus	25791228	26097444	.	-	.	ID=RLOC_00015707;geneIDs=comp54857_c0_seq1.path1;transcripts=comp54857_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25791228	26097444	.	-	.	ID=comp54857_c0_seq1.mrna1;geneID=comp54857_c0_seq1.path1;Name=comp54857_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.6;matches=1316;mismatches=5;indels=0;unknowns=0;Target=comp54857_c0_seq1 1233 1159 .;locus=RLOC_00015707
Chr2	stalkie_big_nohaplotig	exon	25791228	25791887	99	-	.	Parent=comp54857_c0_seq1.mrna1;Target=comp54857_c0_seq1 1326 667 .
Chr2	stalkie_big_nohaplotig	exon	26089740	26089741	100	-	.	Parent=comp54857_c0_seq1.mrna1;Target=comp54857_c0_seq1 666 665 .
Chr2	stalkie_big_nohaplotig	exon	26096786	26097444	99	-	.	Parent=comp54857_c0_seq1.mrna1;Target=comp54857_c0_seq1 664 6 .
Chr2	stalkie_big_nohaplotig	CDS	25791321	25791395	.	-	0	Parent=comp54857_c0_seq1.mrna1
Chr2	gffcl	locus	25796977	25797333	.	+	.	ID=RLOC_00015708;geneIDs=comp117975_c1_seq1.path2;transcripts=comp117975_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	25796977	25797333	.	+	.	ID=comp117975_c1_seq1.mrna2;geneID=comp117975_c1_seq1.path2;Name=comp117975_c1_seq1;Dir=indeterminatecoverage=99.7;identity=99.4;matches=355;mismatches=2;indels=0;unknowns=0;Target=comp117975_c1_seq1 357 1 .;CDS_Target=comp117975_c1_seq1 62 3 .;locus=RLOC_00015708
Chr2	stalkie_big_nohaplotig	exon	25796977	25797333	99	+	.	Parent=comp117975_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	25796979	25797038	.	+	0	Parent=comp117975_c1_seq1.mrna2
Chr2	gffcl	locus	25864892	25872354	.	+	.	ID=RLOC_00015710;geneIDs=FBgn0032768.2.path1,comp772114_c0_seq1.path1;transcripts=comp772114_c0_seq1.mrna1,FBgn0032768.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25864892	25871181	.	+	.	ID=comp772114_c0_seq1.mrna1;geneID=comp772114_c0_seq1.path1;Name=comp772114_c0_seq1;Dir=sensecoverage=99.7;identity=97.7;matches=677;mismatches=13;indels=3;unknowns=0;locus=RLOC_00015710
Chr2	stalkie_big_nohaplotig	exon	25864892	25865558	97	+	.	Parent=comp772114_c0_seq1.mrna1;Target=comp772114_c0_seq1 3 672 +
Chr2	stalkie_big_nohaplotig	exon	25871159	25871181	95	+	.	Parent=comp772114_c0_seq1.mrna1;Target=comp772114_c0_seq1 673 695 +
Chr2	stalkie_big_nohaplotig	CDS	25864893	25865558	.	+	0	Parent=comp772114_c0_seq1.mrna1;Target=comp772114_c0_seq1 4 672 +
Chr2	stalkie_big_nohaplotig	CDS	25871159	25871167	.	+	0	Parent=comp772114_c0_seq1.mrna1;Target=comp772114_c0_seq1 673 681 +
Chr2	stalkie_big_nohaplotig	mRNA	25871168	25872354	.	+	.	ID=FBgn0032768.2.mrna1;geneID=FBgn0032768.2.path1;Name=FBgn0032768.2;Dir=sensecoverage=100.0;identity=99.8;matches=991;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015710
Chr2	stalkie_big_nohaplotig	exon	25871168	25871295	99	+	.	Parent=FBgn0032768.2.mrna1;Target=FBgn0032768.2 1 128 +
Chr2	stalkie_big_nohaplotig	exon	25871352	25871806	99	+	.	Parent=FBgn0032768.2.mrna1;Target=FBgn0032768.2 129 583 +
Chr2	stalkie_big_nohaplotig	exon	25871885	25872172	100	+	.	Parent=FBgn0032768.2.mrna1;Target=FBgn0032768.2 584 871 +
Chr2	stalkie_big_nohaplotig	exon	25872233	25872354	100	+	.	Parent=FBgn0032768.2.mrna1;Target=FBgn0032768.2 872 993 +
Chr2	stalkie_big_nohaplotig	CDS	25871168	25871295	.	+	0	Parent=FBgn0032768.2.mrna1;Target=FBgn0032768.2 1 128 +
Chr2	stalkie_big_nohaplotig	CDS	25871352	25871806	.	+	1	Parent=FBgn0032768.2.mrna1;Target=FBgn0032768.2 129 583 +
Chr2	stalkie_big_nohaplotig	CDS	25871885	25872172	.	+	2	Parent=FBgn0032768.2.mrna1;Target=FBgn0032768.2 584 871 +
Chr2	stalkie_big_nohaplotig	CDS	25872233	25872354	.	+	2	Parent=FBgn0032768.2.mrna1;Target=FBgn0032768.2 872 993 +
Chr2	gffcl	locus	25883410	25885791	.	-	.	ID=RLOC_00015711;geneIDs=comp138424_c1_seq1.path1;transcripts=comp138424_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25883410	25885791	.	-	.	ID=comp138424_c1_seq1.mrna1;geneID=comp138424_c1_seq1.path1;Name=comp138424_c1_seq1;Dir=sensecoverage=100.0;identity=96.9;matches=2026;mismatches=37;indels=28;unknowns=0;Target=comp138424_c1_seq1 951 1055 +;locus=RLOC_00015711
Chr2	stalkie_big_nohaplotig	exon	25883410	25883459	100	-	.	Parent=comp138424_c1_seq1.mrna1;Target=comp138424_c1_seq1 2042 2091 +
Chr2	stalkie_big_nohaplotig	exon	25883594	25883626	100	-	.	Parent=comp138424_c1_seq1.mrna1;Target=comp138424_c1_seq1 2009 2041 +
Chr2	stalkie_big_nohaplotig	exon	25883690	25883805	100	-	.	Parent=comp138424_c1_seq1.mrna1;Target=comp138424_c1_seq1 1893 2008 +
Chr2	stalkie_big_nohaplotig	exon	25883856	25885028	94	-	.	Parent=comp138424_c1_seq1.mrna1;Target=comp138424_c1_seq1 694 1892 +
Chr2	stalkie_big_nohaplotig	exon	25885100	25885791	100	-	.	Parent=comp138424_c1_seq1.mrna1;Target=comp138424_c1_seq1 2 693 +
Chr2	stalkie_big_nohaplotig	CDS	25884690	25884778	.	-	0	Parent=comp138424_c1_seq1.mrna1
Chr2	gffcl	locus	25926822	25927424	.	-	.	ID=RLOC_00015712;geneIDs=comp150203_c2_seq1.path1;transcripts=comp150203_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	25926822	25927424	.	-	.	ID=comp150203_c2_seq1.mrna1;geneID=comp150203_c2_seq1.path1;Name=comp150203_c2_seq1;Dir=indeterminatecoverage=96.9;identity=99.3;matches=599;mismatches=4;indels=0;unknowns=0;Target=comp150203_c2_seq1 603 1 .;CDS_Target=comp150203_c2_seq1 532 359 .;locus=RLOC_00015712
Chr2	stalkie_big_nohaplotig	exon	25926822	25927424	99	-	.	Parent=comp150203_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	25926893	25927066	.	-	0	Parent=comp150203_c2_seq1.mrna1
Chr2	gffcl	locus	26019212	26019975	.	+	.	ID=RLOC_00015713;geneIDs=comp134848_c0_seq1.path1;transcripts=comp134848_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26019212	26019975	.	+	.	ID=comp134848_c0_seq1.mrna1;geneID=comp134848_c0_seq1.path1;Name=comp134848_c0_seq1;Dir=sensecoverage=100.0;identity=98.6;matches=290;mismatches=4;indels=0;unknowns=0;Target=comp134848_c0_seq1 1 177 +;locus=RLOC_00015713
Chr2	stalkie_big_nohaplotig	exon	26019212	26019478	98	+	.	Parent=comp134848_c0_seq1.mrna1;Target=comp134848_c0_seq1 1 267 +
Chr2	stalkie_big_nohaplotig	exon	26019949	26019975	96	+	.	Parent=comp134848_c0_seq1.mrna1;Target=comp134848_c0_seq1 268 294 +
Chr2	stalkie_big_nohaplotig	CDS	26019212	26019388	.	+	0	Parent=comp134848_c0_seq1.mrna1
Chr2	gffcl	locus	26036696	26036964	.	+	.	ID=RLOC_00015714;geneIDs=comp143137_c0_seq1.path1;transcripts=comp143137_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26036696	26036964	.	+	.	ID=comp143137_c0_seq1.mrna1;geneID=comp143137_c0_seq1.path1;Name=comp143137_c0_seq1;Dir=indeterminatecoverage=93.5;identity=80.0;matches=228;mismatches=2;indels=55;unknowns=0;Target=comp143137_c0_seq1 246 1 .;CDS_Target=comp143137_c0_seq1 25 2 .;locus=RLOC_00015714
Chr2	stalkie_big_nohaplotig	exon	26036696	26036964	80	+	.	Parent=comp143137_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26036697	26036720	.	+	0	Parent=comp143137_c0_seq1.mrna1
Chr2	gffcl	locus	26037005	26037328	.	-	.	ID=RLOC_00015715;geneIDs=comp142100_c0_seq1.path1;transcripts=comp142100_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26037005	26037328	.	-	.	ID=comp142100_c0_seq1.mrna1;geneID=comp142100_c0_seq1.path1;Name=comp142100_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.4;matches=322;mismatches=0;indels=2;unknowns=0;Target=comp142100_c0_seq1 324 3 .;CDS_Target=comp142100_c0_seq1 96 4 .;locus=RLOC_00015715
Chr2	stalkie_big_nohaplotig	exon	26037005	26037328	99	-	.	Parent=comp142100_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26037235	26037327	.	-	0	Parent=comp142100_c0_seq1.mrna1
Chr2	gffcl	locus	26039046	26089026	.	-	.	ID=RLOC_00015716;geneIDs=FBgn0034180.1.path1;transcripts=FBgn0034180.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26039046	26089026	.	-	.	ID=FBgn0034180.1.mrna1;geneID=FBgn0034180.1.path1;Name=FBgn0034180.1;Dir=sensecoverage=100.0;identity=100.0;matches=3200;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015716
Chr2	stalkie_big_nohaplotig	exon	26039046	26039124	100	-	.	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 3123 3201 +
Chr2	stalkie_big_nohaplotig	exon	26039189	26039377	100	-	.	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 2934 3122 +
Chr2	stalkie_big_nohaplotig	exon	26039617	26039713	100	-	.	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 2837 2933 +
Chr2	stalkie_big_nohaplotig	exon	26042509	26042629	100	-	.	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 2716 2836 +
Chr2	stalkie_big_nohaplotig	exon	26042693	26043079	100	-	.	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 2329 2715 +
Chr2	stalkie_big_nohaplotig	exon	26043267	26043359	100	-	.	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 2236 2328 +
Chr2	stalkie_big_nohaplotig	exon	26045202	26045653	100	-	.	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 1784 2235 +
Chr2	stalkie_big_nohaplotig	exon	26045830	26046032	100	-	.	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 1581 1783 +
Chr2	stalkie_big_nohaplotig	exon	26046131	26047016	100	-	.	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 695 1580 +
Chr2	stalkie_big_nohaplotig	exon	26048473	26048672	100	-	.	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 495 694 +
Chr2	stalkie_big_nohaplotig	exon	26049040	26049221	100	-	.	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 313 494 +
Chr2	stalkie_big_nohaplotig	exon	26057273	26057480	100	-	.	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 105 312 +
Chr2	stalkie_big_nohaplotig	exon	26088923	26089026	99	-	.	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 1 104 +
Chr2	stalkie_big_nohaplotig	CDS	26039046	26039124	.	-	1	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 3123 3201 +
Chr2	stalkie_big_nohaplotig	CDS	26039189	26039377	.	-	1	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 2934 3122 +
Chr2	stalkie_big_nohaplotig	CDS	26039617	26039713	.	-	2	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 2837 2933 +
Chr2	stalkie_big_nohaplotig	CDS	26042509	26042629	.	-	0	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 2716 2836 +
Chr2	stalkie_big_nohaplotig	CDS	26042693	26043079	.	-	0	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 2329 2715 +
Chr2	stalkie_big_nohaplotig	CDS	26043267	26043359	.	-	0	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 2236 2328 +
Chr2	stalkie_big_nohaplotig	CDS	26045202	26045653	.	-	2	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 1784 2235 +
Chr2	stalkie_big_nohaplotig	CDS	26045830	26046032	.	-	1	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 1581 1783 +
Chr2	stalkie_big_nohaplotig	CDS	26046131	26047016	.	-	2	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 695 1580 +
Chr2	stalkie_big_nohaplotig	CDS	26048473	26048672	.	-	1	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 495 694 +
Chr2	stalkie_big_nohaplotig	CDS	26049040	26049221	.	-	0	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 313 494 +
Chr2	stalkie_big_nohaplotig	CDS	26057273	26057480	.	-	1	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 105 312 +
Chr2	stalkie_big_nohaplotig	CDS	26088923	26089026	.	-	0	Parent=FBgn0034180.1.mrna1;Target=FBgn0034180.1 1 104 +
Chr2	gffcl	locus	26040303	26041968	.	.	.	ID=RLOC_00015717;geneIDs=comp140569_c0_seq1.path1,comp154959_c0_seq1.path1;transcripts=comp154959_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26041016	26041968	.	-	.	ID=comp154959_c0_seq1.mrna1;geneID=comp154959_c0_seq1.path1;Name=comp154959_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=945;mismatches=4;indels=4;unknowns=0;Target=comp154959_c0_seq1 949 1 .;CDS_Target=comp154959_c0_seq1 466 341 .;locus=RLOC_00015717
Chr2	stalkie_big_nohaplotig	exon	26041016	26041968	99	-	.	Parent=comp154959_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26041503	26041628	.	-	0	Parent=comp154959_c0_seq1.mrna1
Chr2	gffcl	locus	26091441	26091797	.	-	.	ID=RLOC_00015718;geneIDs=comp117975_c1_seq1.path1;transcripts=comp117975_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26091441	26091797	.	-	.	ID=comp117975_c1_seq1.mrna1;geneID=comp117975_c1_seq1.path1;Name=comp117975_c1_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=356;mismatches=1;indels=0;unknowns=0;Target=comp117975_c1_seq1 357 1 .;CDS_Target=comp117975_c1_seq1 244 83 .;locus=RLOC_00015718
Chr2	stalkie_big_nohaplotig	exon	26091441	26091797	99	-	.	Parent=comp117975_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26091554	26091715	.	-	0	Parent=comp117975_c1_seq1.mrna1
Chr2	gffcl	locus	26097864	26139556	.	-	.	ID=RLOC_00015719;geneIDs=FBgn0263395.1.path2;transcripts=FBgn0263395.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	26097864	26139556	.	-	.	ID=FBgn0263395.1.mrna2;geneID=FBgn0263395.1.path2;Name=FBgn0263395.1;Dir=sensecoverage=93.6;identity=99.8;matches=2505;mismatches=6;indels=0;unknowns=0;locus=RLOC_00015719
Chr2	stalkie_big_nohaplotig	exon	26097864	26097960	100	-	.	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 2586 2682 +
Chr2	stalkie_big_nohaplotig	exon	26099482	26099608	99	-	.	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 2459 2585 +
Chr2	stalkie_big_nohaplotig	exon	26099664	26099885	100	-	.	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 2237 2458 +
Chr2	stalkie_big_nohaplotig	exon	26099950	26100396	99	-	.	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 1790 2236 +
Chr2	stalkie_big_nohaplotig	exon	26100462	26100815	99	-	.	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 1436 1789 +
Chr2	stalkie_big_nohaplotig	exon	26100902	26101028	99	-	.	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 1309 1435 +
Chr2	stalkie_big_nohaplotig	exon	26102078	26102207	100	-	.	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 1179 1308 +
Chr2	stalkie_big_nohaplotig	exon	26109145	26109183	100	-	.	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 1140 1178 +
Chr2	stalkie_big_nohaplotig	exon	26120679	26120739	100	-	.	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 1079 1139 +
Chr2	stalkie_big_nohaplotig	exon	26120894	26120981	100	-	.	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 991 1078 +
Chr2	stalkie_big_nohaplotig	exon	26123498	26123796	99	-	.	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 692 990 +
Chr2	stalkie_big_nohaplotig	exon	26124272	26124370	100	-	.	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 593 691 +
Chr2	stalkie_big_nohaplotig	exon	26139136	26139556	100	-	.	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 172 592 +
Chr2	stalkie_big_nohaplotig	CDS	26097864	26097960	.	-	1	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 2586 2682 +
Chr2	stalkie_big_nohaplotig	CDS	26099482	26099608	.	-	2	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 2459 2585 +
Chr2	stalkie_big_nohaplotig	CDS	26099664	26099885	.	-	2	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 2237 2458 +
Chr2	stalkie_big_nohaplotig	CDS	26099950	26100396	.	-	2	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 1790 2236 +
Chr2	stalkie_big_nohaplotig	CDS	26100462	26100815	.	-	2	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 1436 1789 +
Chr2	stalkie_big_nohaplotig	CDS	26100902	26101028	.	-	0	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 1309 1435 +
Chr2	stalkie_big_nohaplotig	CDS	26102078	26102207	.	-	1	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 1179 1308 +
Chr2	stalkie_big_nohaplotig	CDS	26109145	26109183	.	-	1	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 1140 1178 +
Chr2	stalkie_big_nohaplotig	CDS	26120679	26120739	.	-	2	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 1079 1139 +
Chr2	stalkie_big_nohaplotig	CDS	26120894	26120981	.	-	0	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 991 1078 +
Chr2	stalkie_big_nohaplotig	CDS	26123498	26123796	.	-	2	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 692 990 +
Chr2	stalkie_big_nohaplotig	CDS	26124272	26124370	.	-	2	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 593 691 +
Chr2	stalkie_big_nohaplotig	CDS	26139136	26139556	.	-	0	Parent=FBgn0263395.1.mrna2;Target=FBgn0263395.1 172 592 +
Chr2	gffcl	locus	26226295	26227401	.	+	.	ID=RLOC_00015720;geneIDs=ORF1426.path1;transcripts=ORF1426.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26226295	26227401	.	+	.	ID=ORF1426.mrna1;geneID=ORF1426.path1;Name=ORF1426;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1107;mismatches=0;indels=0;unknowns=0;Target=ORF1426 1107 1 .;locus=RLOC_00015720
Chr2	stalkie_big_nohaplotig	exon	26226295	26227401	100	+	.	Parent=ORF1426.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26226295	26227401	.	+	0	Parent=ORF1426.mrna1
Chr2	gffcl	locus	26322725	26323712	.	-	.	ID=RLOC_00015721;geneIDs=FBgn0032004.2.path1;transcripts=FBgn0032004.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26322725	26323712	.	-	.	ID=FBgn0032004.2.mrna1;geneID=FBgn0032004.2.path1;Name=FBgn0032004.2;Dir=sensecoverage=100.0;identity=99.8;matches=910;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015721
Chr2	stalkie_big_nohaplotig	exon	26322725	26323375	99	-	.	Parent=FBgn0032004.2.mrna1;Target=FBgn0032004.2 262 912 +
Chr2	stalkie_big_nohaplotig	exon	26323452	26323712	100	-	.	Parent=FBgn0032004.2.mrna1;Target=FBgn0032004.2 1 261 +
Chr2	stalkie_big_nohaplotig	CDS	26322725	26323375	.	-	0	Parent=FBgn0032004.2.mrna1;Target=FBgn0032004.2 262 912 +
Chr2	stalkie_big_nohaplotig	CDS	26323452	26323712	.	-	0	Parent=FBgn0032004.2.mrna1;Target=FBgn0032004.2 1 261 +
Chr2	gffcl	locus	26325984	26327121	.	-	.	ID=RLOC_00015722;geneIDs=ORF1542.path1;transcripts=ORF1542.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26325984	26327121	.	-	.	ID=ORF1542.mrna1;geneID=ORF1542.path1;Name=ORF1542;Dir=sensecoverage=100.0;identity=99.9;matches=1064;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015722
Chr2	stalkie_big_nohaplotig	exon	26325984	26326139	100	-	.	Parent=ORF1542.mrna1;Target=ORF1542 910 1065 +
Chr2	stalkie_big_nohaplotig	exon	26326213	26327121	99	-	.	Parent=ORF1542.mrna1;Target=ORF1542 1 909 +
Chr2	stalkie_big_nohaplotig	CDS	26325984	26326139	.	-	0	Parent=ORF1542.mrna1;Target=ORF1542 910 1065 +
Chr2	stalkie_big_nohaplotig	CDS	26326213	26327121	.	-	0	Parent=ORF1542.mrna1;Target=ORF1542 1 909 +
Chr2	gffcl	locus	26332747	26338631	.	-	.	ID=RLOC_00015723;geneIDs=FBgn0019890.2.path1;transcripts=FBgn0019890.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26332747	26338631	.	-	.	ID=FBgn0019890.2.mrna1;geneID=FBgn0019890.2.path1;Name=FBgn0019890.2;Dir=sensecoverage=100.0;identity=97.6;matches=3844;mismatches=89;indels=6;unknowns=0;locus=RLOC_00015723
Chr2	stalkie_big_nohaplotig	exon	26332747	26336544	97	-	.	Parent=FBgn0019890.2.mrna1;Target=FBgn0019890.2 136 3939 +
Chr2	stalkie_big_nohaplotig	exon	26338497	26338631	98	-	.	Parent=FBgn0019890.2.mrna1;Target=FBgn0019890.2 1 135 +
Chr2	stalkie_big_nohaplotig	CDS	26332747	26336544	.	-	0	Parent=FBgn0019890.2.mrna1;Target=FBgn0019890.2 136 3939 +
Chr2	stalkie_big_nohaplotig	CDS	26338497	26338631	.	-	0	Parent=FBgn0019890.2.mrna1;Target=FBgn0019890.2 1 135 +
Chr2	gffcl	locus	26346396	26347864	.	-	.	ID=RLOC_00015724;geneIDs=FBgn0033059.1.path1;transcripts=FBgn0033059.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26346396	26347864	.	-	.	ID=FBgn0033059.1.mrna1;geneID=FBgn0033059.1.path1;Name=FBgn0033059.1;Dir=sensecoverage=100.0;identity=99.3;matches=1275;mismatches=9;indels=0;unknowns=0;locus=RLOC_00015724
Chr2	stalkie_big_nohaplotig	exon	26346396	26346507	99	-	.	Parent=FBgn0033059.1.mrna1;Target=FBgn0033059.1 1173 1284 +
Chr2	stalkie_big_nohaplotig	exon	26346567	26346925	99	-	.	Parent=FBgn0033059.1.mrna1;Target=FBgn0033059.1 814 1172 +
Chr2	stalkie_big_nohaplotig	exon	26346979	26347667	99	-	.	Parent=FBgn0033059.1.mrna1;Target=FBgn0033059.1 125 813 +
Chr2	stalkie_big_nohaplotig	exon	26347741	26347864	96	-	.	Parent=FBgn0033059.1.mrna1;Target=FBgn0033059.1 1 124 +
Chr2	stalkie_big_nohaplotig	CDS	26346396	26346507	.	-	1	Parent=FBgn0033059.1.mrna1;Target=FBgn0033059.1 1173 1284 +
Chr2	stalkie_big_nohaplotig	CDS	26346567	26346925	.	-	0	Parent=FBgn0033059.1.mrna1;Target=FBgn0033059.1 814 1172 +
Chr2	stalkie_big_nohaplotig	CDS	26346979	26347667	.	-	2	Parent=FBgn0033059.1.mrna1;Target=FBgn0033059.1 125 813 +
Chr2	stalkie_big_nohaplotig	CDS	26347741	26347864	.	-	0	Parent=FBgn0033059.1.mrna1;Target=FBgn0033059.1 1 124 +
Chr2	gffcl	locus	26349628	26350679	.	+	.	ID=RLOC_00015725;geneIDs=FBgn0033060.1.path1;transcripts=FBgn0033060.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26349628	26350679	.	+	.	ID=FBgn0033060.1.mrna1;geneID=FBgn0033060.1.path1;Name=FBgn0033060.1;Dir=sensecoverage=100.0;identity=99.5;matches=937;mismatches=5;indels=0;unknowns=0;locus=RLOC_00015725
Chr2	stalkie_big_nohaplotig	exon	26349628	26349760	98	+	.	Parent=FBgn0033060.1.mrna1;Target=FBgn0033060.1 1 133 +
Chr2	stalkie_big_nohaplotig	exon	26349816	26350025	100	+	.	Parent=FBgn0033060.1.mrna1;Target=FBgn0033060.1 134 343 +
Chr2	stalkie_big_nohaplotig	exon	26350081	26350679	99	+	.	Parent=FBgn0033060.1.mrna1;Target=FBgn0033060.1 344 942 +
Chr2	stalkie_big_nohaplotig	CDS	26349628	26349760	.	+	0	Parent=FBgn0033060.1.mrna1;Target=FBgn0033060.1 1 133 +
Chr2	stalkie_big_nohaplotig	CDS	26349816	26350025	.	+	2	Parent=FBgn0033060.1.mrna1;Target=FBgn0033060.1 134 343 +
Chr2	stalkie_big_nohaplotig	CDS	26350081	26350679	.	+	2	Parent=FBgn0033060.1.mrna1;Target=FBgn0033060.1 344 942 +
Chr2	gffcl	locus	26352303	26355307	.	+	.	ID=RLOC_00015726;geneIDs=FBgn0033061.1.path1;transcripts=FBgn0033061.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26352303	26355307	.	+	.	ID=FBgn0033061.1.mrna1;geneID=FBgn0033061.1.path1;Name=FBgn0033061.1;Dir=sensecoverage=100.0;identity=99.8;matches=1557;mismatches=2;indels=1;unknowns=0;locus=RLOC_00015726
Chr2	stalkie_big_nohaplotig	exon	26352303	26352733	99	+	.	Parent=FBgn0033061.1.mrna1;Target=FBgn0033061.1 1 431 +
Chr2	stalkie_big_nohaplotig	exon	26353614	26353868	99	+	.	Parent=FBgn0033061.1.mrna1;Target=FBgn0033061.1 432 686 +
Chr2	stalkie_big_nohaplotig	exon	26354382	26354946	100	+	.	Parent=FBgn0033061.1.mrna1;Target=FBgn0033061.1 687 1251 +
Chr2	stalkie_big_nohaplotig	exon	26355000	26355307	99	+	.	Parent=FBgn0033061.1.mrna1;Target=FBgn0033061.1 1252 1560 +
Chr2	stalkie_big_nohaplotig	CDS	26352303	26352733	.	+	0	Parent=FBgn0033061.1.mrna1;Target=FBgn0033061.1 1 431 +
Chr2	stalkie_big_nohaplotig	CDS	26353614	26353868	.	+	1	Parent=FBgn0033061.1.mrna1;Target=FBgn0033061.1 432 686 +
Chr2	stalkie_big_nohaplotig	CDS	26354382	26354946	.	+	1	Parent=FBgn0033061.1.mrna1;Target=FBgn0033061.1 687 1251 +
Chr2	stalkie_big_nohaplotig	CDS	26355000	26355307	.	+	0	Parent=FBgn0033061.1.mrna1;Target=FBgn0033061.1 1252 1560 +
Chr2	gffcl	locus	26356292	26361358	.	-	.	ID=RLOC_00015727;geneIDs=FBgn0033062.1.path1;transcripts=FBgn0033062.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26356292	26361358	.	-	.	ID=FBgn0033062.1.mrna1;geneID=FBgn0033062.1.path1;Name=FBgn0033062.1;Dir=sensecoverage=100.0;identity=99.8;matches=2859;mismatches=5;indels=0;unknowns=0;locus=RLOC_00015727
Chr2	stalkie_big_nohaplotig	exon	26356292	26356370	100	-	.	Parent=FBgn0033062.1.mrna1;Target=FBgn0033062.1 2787 2865 +
Chr2	stalkie_big_nohaplotig	exon	26356509	26356616	100	-	.	Parent=FBgn0033062.1.mrna1;Target=FBgn0033062.1 2679 2786 +
Chr2	stalkie_big_nohaplotig	exon	26356849	26357582	99	-	.	Parent=FBgn0033062.1.mrna1;Target=FBgn0033062.1 1945 2678 +
Chr2	stalkie_big_nohaplotig	exon	26357650	26358936	99	-	.	Parent=FBgn0033062.1.mrna1;Target=FBgn0033062.1 658 1944 +
Chr2	stalkie_big_nohaplotig	exon	26359004	26359070	100	-	.	Parent=FBgn0033062.1.mrna1;Target=FBgn0033062.1 591 657 +
Chr2	stalkie_big_nohaplotig	exon	26360609	26360891	99	-	.	Parent=FBgn0033062.1.mrna1;Target=FBgn0033062.1 308 590 +
Chr2	stalkie_big_nohaplotig	exon	26360995	26361155	100	-	.	Parent=FBgn0033062.1.mrna1;Target=FBgn0033062.1 147 307 +
Chr2	stalkie_big_nohaplotig	exon	26361214	26361358	100	-	.	Parent=FBgn0033062.1.mrna1;Target=FBgn0033062.1 2 146 +
Chr2	stalkie_big_nohaplotig	CDS	26356292	26356370	.	-	1	Parent=FBgn0033062.1.mrna1;Target=FBgn0033062.1 2787 2865 +
Chr2	stalkie_big_nohaplotig	CDS	26356509	26356616	.	-	1	Parent=FBgn0033062.1.mrna1;Target=FBgn0033062.1 2679 2786 +
Chr2	stalkie_big_nohaplotig	CDS	26356849	26357582	.	-	0	Parent=FBgn0033062.1.mrna1;Target=FBgn0033062.1 1945 2678 +
Chr2	stalkie_big_nohaplotig	CDS	26357650	26358936	.	-	0	Parent=FBgn0033062.1.mrna1;Target=FBgn0033062.1 658 1944 +
Chr2	stalkie_big_nohaplotig	CDS	26359004	26359070	.	-	1	Parent=FBgn0033062.1.mrna1;Target=FBgn0033062.1 591 657 +
Chr2	stalkie_big_nohaplotig	CDS	26360609	26360891	.	-	2	Parent=FBgn0033062.1.mrna1;Target=FBgn0033062.1 308 590 +
Chr2	stalkie_big_nohaplotig	CDS	26360995	26361155	.	-	1	Parent=FBgn0033062.1.mrna1;Target=FBgn0033062.1 147 307 +
Chr2	stalkie_big_nohaplotig	CDS	26361214	26361356	.	-	0	Parent=FBgn0033062.1.mrna1;Target=FBgn0033062.1 4 146 +
Chr2	gffcl	locus	26383406	26465309	.	+	.	ID=RLOC_00015728;geneIDs=FBgn0034693.1.path1,comp158269_c0_seq1.path1,comp162804_c0_seq1.path1;transcripts=comp162804_c0_seq1.mrna1,FBgn0034693.1.mrna1,comp158269_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26383406	26465309	.	+	.	ID=comp162804_c0_seq1.mrna1;geneID=comp162804_c0_seq1.path1;Name=comp162804_c0_seq1;Dir=sensecoverage=95.5;identity=99.6;matches=4732;mismatches=2;indels=17;unknowns=0;locus=RLOC_00015728
Chr2	stalkie_big_nohaplotig	exon	26383406	26383730	100	+	.	Parent=comp162804_c0_seq1.mrna1;Target=comp162804_c0_seq1 1 325 +
Chr2	stalkie_big_nohaplotig	exon	26384121	26384357	100	+	.	Parent=comp162804_c0_seq1.mrna1;Target=comp162804_c0_seq1 326 562 +
Chr2	stalkie_big_nohaplotig	exon	26428638	26432084	99	+	.	Parent=comp162804_c0_seq1.mrna1;Target=comp162804_c0_seq1 563 4025 +
Chr2	stalkie_big_nohaplotig	exon	26432172	26432858	99	+	.	Parent=comp162804_c0_seq1.mrna1;Target=comp162804_c0_seq1 4026 4711 +
Chr2	stalkie_big_nohaplotig	exon	26435200	26435202	100	+	.	Parent=comp162804_c0_seq1.mrna1;Target=comp162804_c0_seq1 4712 4714 +
Chr2	stalkie_big_nohaplotig	exon	26439672	26439679	100	+	.	Parent=comp162804_c0_seq1.mrna1;Target=comp162804_c0_seq1 4715 4722 +
Chr2	stalkie_big_nohaplotig	exon	26444571	26444574	100	+	.	Parent=comp162804_c0_seq1.mrna1;Target=comp162804_c0_seq1 4723 4726 +
Chr2	stalkie_big_nohaplotig	exon	26452687	26452697	100	+	.	Parent=comp162804_c0_seq1.mrna1;Target=comp162804_c0_seq1 4727 4737 +
Chr2	stalkie_big_nohaplotig	exon	26463518	26463519	100	+	.	Parent=comp162804_c0_seq1.mrna1;Target=comp162804_c0_seq1 4738 4739 +
Chr2	stalkie_big_nohaplotig	exon	26465299	26465309	100	+	.	Parent=comp162804_c0_seq1.mrna1;Target=comp162804_c0_seq1 4740 4750 +
Chr2	stalkie_big_nohaplotig	CDS	26384228	26384357	.	+	0	Parent=comp162804_c0_seq1.mrna1;Target=comp162804_c0_seq1 433 562 +
Chr2	stalkie_big_nohaplotig	CDS	26428638	26430939	.	+	2	Parent=comp162804_c0_seq1.mrna1;Target=comp162804_c0_seq1 563 2880 +
Chr2	stalkie_big_nohaplotig	mRNA	26384156	26432638	.	+	.	ID=FBgn0034693.1.mrna1;geneID=FBgn0034693.1.path1;Name=FBgn0034693.1;Dir=sensecoverage=100.0;identity=100.0;matches=1800;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015728
Chr2	stalkie_big_nohaplotig	exon	26384156	26384357	100	+	.	Parent=FBgn0034693.1.mrna1;Target=FBgn0034693.1 1 202 +
Chr2	stalkie_big_nohaplotig	exon	26428638	26428928	100	+	.	Parent=FBgn0034693.1.mrna1;Target=FBgn0034693.1 203 493 +
Chr2	stalkie_big_nohaplotig	exon	26431245	26432084	100	+	.	Parent=FBgn0034693.1.mrna1;Target=FBgn0034693.1 494 1333 +
Chr2	stalkie_big_nohaplotig	exon	26432172	26432638	100	+	.	Parent=FBgn0034693.1.mrna1;Target=FBgn0034693.1 1334 1800 +
Chr2	stalkie_big_nohaplotig	CDS	26384156	26384357	.	+	0	Parent=FBgn0034693.1.mrna1;Target=FBgn0034693.1 1 202 +
Chr2	stalkie_big_nohaplotig	CDS	26428638	26428928	.	+	2	Parent=FBgn0034693.1.mrna1;Target=FBgn0034693.1 203 493 +
Chr2	stalkie_big_nohaplotig	CDS	26431245	26432084	.	+	2	Parent=FBgn0034693.1.mrna1;Target=FBgn0034693.1 494 1333 +
Chr2	stalkie_big_nohaplotig	CDS	26432172	26432638	.	+	2	Parent=FBgn0034693.1.mrna1;Target=FBgn0034693.1 1334 1800 +
Chr2	stalkie_big_nohaplotig	mRNA	26443879	26445142	.	+	.	ID=comp158269_c0_seq1.mrna1;geneID=comp158269_c0_seq1.path1;Name=comp158269_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.4;matches=1257;mismatches=7;indels=0;unknowns=0;Target=comp158269_c0_seq1 1270 7 .;CDS_Target=comp158269_c0_seq1 628 572 .;locus=RLOC_00015728
Chr2	stalkie_big_nohaplotig	exon	26443879	26445142	99	+	.	Parent=comp158269_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26444444	26444500	.	+	0	Parent=comp158269_c0_seq1.mrna1
Chr2	gffcl	locus	26390518	26391080	.	-	.	ID=RLOC_00015729;geneIDs=comp134541_c0_seq1.path1;transcripts=comp134541_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26390518	26391080	.	-	.	ID=comp134541_c0_seq1.mrna1;geneID=comp134541_c0_seq1.path1;Name=comp134541_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=560;mismatches=3;indels=3;unknowns=0;Target=comp134541_c0_seq1 566 1 .;CDS_Target=comp134541_c0_seq1 112 23 .;locus=RLOC_00015729
Chr2	stalkie_big_nohaplotig	exon	26390518	26391080	98	-	.	Parent=comp134541_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26390969	26391058	.	-	0	Parent=comp134541_c0_seq1.mrna1
Chr2	gffcl	locus	26402952	26404289	.	+	.	ID=RLOC_00015730;geneIDs=FBgn0053966.3.path1;transcripts=FBgn0053966.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26402952	26404289	.	+	.	ID=FBgn0053966.3.mrna1;geneID=FBgn0053966.3.path1;Name=FBgn0053966.3;Dir=sensecoverage=100.0;identity=99.7;matches=960;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015730
Chr2	stalkie_big_nohaplotig	exon	26402952	26403286	100	+	.	Parent=FBgn0053966.3.mrna1;Target=FBgn0053966.3 1 335 +
Chr2	stalkie_big_nohaplotig	exon	26403560	26403932	99	+	.	Parent=FBgn0053966.3.mrna1;Target=FBgn0053966.3 336 708 +
Chr2	stalkie_big_nohaplotig	exon	26404035	26404289	99	+	.	Parent=FBgn0053966.3.mrna1;Target=FBgn0053966.3 709 963 +
Chr2	stalkie_big_nohaplotig	CDS	26402952	26403286	.	+	0	Parent=FBgn0053966.3.mrna1;Target=FBgn0053966.3 1 335 +
Chr2	stalkie_big_nohaplotig	CDS	26403560	26403932	.	+	1	Parent=FBgn0053966.3.mrna1;Target=FBgn0053966.3 336 708 +
Chr2	stalkie_big_nohaplotig	CDS	26404035	26404289	.	+	0	Parent=FBgn0053966.3.mrna1;Target=FBgn0053966.3 709 963 +
Chr2	gffcl	locus	26404957	26405613	.	+	.	ID=RLOC_00015731;geneIDs=comp154137_c0_seq1.path1;transcripts=comp154137_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26404957	26405613	.	+	.	ID=comp154137_c0_seq1.mrna1;geneID=comp154137_c0_seq1.path1;Name=comp154137_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.4;matches=638;mismatches=19;indels=5;unknowns=0;Target=comp154137_c0_seq1 662 1 .;CDS_Target=comp154137_c0_seq1 649 542 .;locus=RLOC_00015731
Chr2	stalkie_big_nohaplotig	exon	26404957	26405613	96	+	.	Parent=comp154137_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26405493	26405600	.	+	0	Parent=comp154137_c0_seq1.mrna1
Chr2	gffcl	locus	26408626	26410378	.	+	.	ID=RLOC_00015732;geneIDs=comp148115_c0_seq1.path1;transcripts=comp148115_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26408626	26410378	.	+	.	ID=comp148115_c0_seq1.mrna1;geneID=comp148115_c0_seq1.path1;Name=comp148115_c0_seq1;Dir=antisensecoverage=83.0;identity=99.7;matches=1235;mismatches=4;indels=0;unknowns=0;locus=RLOC_00015732
Chr2	stalkie_big_nohaplotig	exon	26408626	26409114	99	+	.	Parent=comp148115_c0_seq1.mrna1;Target=comp148115_c0_seq1 751 1239 -
Chr2	stalkie_big_nohaplotig	exon	26409175	26409318	100	+	.	Parent=comp148115_c0_seq1.mrna1;Target=comp148115_c0_seq1 607 750 -
Chr2	stalkie_big_nohaplotig	exon	26409700	26410053	100	+	.	Parent=comp148115_c0_seq1.mrna1;Target=comp148115_c0_seq1 253 606 -
Chr2	stalkie_big_nohaplotig	exon	26410127	26410378	98	+	.	Parent=comp148115_c0_seq1.mrna1;Target=comp148115_c0_seq1 1 252 -
Chr2	stalkie_big_nohaplotig	CDS	26408626	26409114	.	+	0	Parent=comp148115_c0_seq1.mrna1;Target=comp148115_c0_seq1 751 1239 .
Chr2	stalkie_big_nohaplotig	CDS	26409175	26409318	.	+	0	Parent=comp148115_c0_seq1.mrna1;Target=comp148115_c0_seq1 607 750 .
Chr2	stalkie_big_nohaplotig	CDS	26409700	26410053	.	+	0	Parent=comp148115_c0_seq1.mrna1;Target=comp148115_c0_seq1 253 606 .
Chr2	stalkie_big_nohaplotig	CDS	26410127	26410357	.	+	0	Parent=comp148115_c0_seq1.mrna1;Target=comp148115_c0_seq1 22 252 .
Chr2	gffcl	locus	26412580	26413475	.	-	.	ID=RLOC_00015733;geneIDs=FBgn0050338.1.path1;transcripts=FBgn0050338.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26412580	26413475	.	-	.	ID=FBgn0050338.1.mrna1;geneID=FBgn0050338.1.path1;Name=FBgn0050338.1;Dir=indeterminatecoverage=96.7;identity=99.8;matches=894;mismatches=2;indels=0;unknowns=0;Target=FBgn0050338.1 927 32 .;CDS_Target=FBgn0050338.1 927 34 .;locus=RLOC_00015733
Chr2	stalkie_big_nohaplotig	exon	26412580	26413475	99	-	.	Parent=FBgn0050338.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26412580	26413473	.	-	0	Parent=FBgn0050338.1.mrna1
Chr2	gffcl	locus	26415994	26420950	.	+	.	ID=RLOC_00015734;geneIDs=FBgn0261016.1.path1;transcripts=FBgn0261016.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26415994	26420950	.	+	.	ID=FBgn0261016.1.mrna1;geneID=FBgn0261016.1.path1;Name=FBgn0261016.1;Dir=sensecoverage=62.7;identity=99.4;matches=2585;mismatches=14;indels=1;unknowns=0;Target=FBgn0261016.1 3 62 +;locus=RLOC_00015734
Chr2	stalkie_big_nohaplotig	exon	26415994	26416076	97	+	.	Parent=FBgn0261016.1.mrna1;Target=FBgn0261016.1 1 84 +
Chr2	stalkie_big_nohaplotig	exon	26416795	26416878	97	+	.	Parent=FBgn0261016.1.mrna1;Target=FBgn0261016.1 85 168 +
Chr2	stalkie_big_nohaplotig	exon	26417022	26417795	99	+	.	Parent=FBgn0261016.1.mrna1;Target=FBgn0261016.1 169 942 +
Chr2	stalkie_big_nohaplotig	exon	26419106	26419590	98	+	.	Parent=FBgn0261016.1.mrna1;Target=FBgn0261016.1 943 1427 +
Chr2	stalkie_big_nohaplotig	exon	26419655	26420265	100	+	.	Parent=FBgn0261016.1.mrna1;Target=FBgn0261016.1 1428 2038 +
Chr2	stalkie_big_nohaplotig	exon	26420328	26420722	99	+	.	Parent=FBgn0261016.1.mrna1;Target=FBgn0261016.1 2039 2433 +
Chr2	stalkie_big_nohaplotig	exon	26420784	26420950	99	+	.	Parent=FBgn0261016.1.mrna1;Target=FBgn0261016.1 2434 2600 +
Chr2	stalkie_big_nohaplotig	CDS	26415996	26416054	.	+	0	Parent=FBgn0261016.1.mrna1
Chr2	gffcl	locus	26422928	26423416	.	-	.	ID=RLOC_00015735;geneIDs=comp78995_c0_seq1.path1;transcripts=comp78995_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26422928	26423416	.	-	.	ID=comp78995_c0_seq1.mrna1;geneID=comp78995_c0_seq1.path1;Name=comp78995_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=484;mismatches=4;indels=1;unknowns=0;Target=comp78995_c0_seq1 488 1 .;CDS_Target=comp78995_c0_seq1 265 125 .;locus=RLOC_00015735
Chr2	stalkie_big_nohaplotig	exon	26422928	26423416	98	-	.	Parent=comp78995_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26423152	26423292	.	-	0	Parent=comp78995_c0_seq1.mrna1
Chr2	gffcl	locus	26426685	26427076	.	-	.	ID=RLOC_00015736;geneIDs=comp130896_c0_seq1.path1;transcripts=comp130896_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26426685	26427076	.	-	.	ID=comp130896_c0_seq1.mrna1;geneID=comp130896_c0_seq1.path1;Name=comp130896_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=392;mismatches=0;indels=0;unknowns=0;Target=comp130896_c0_seq1 392 1 .;CDS_Target=comp130896_c0_seq1 158 93 .;locus=RLOC_00015736
Chr2	stalkie_big_nohaplotig	exon	26426685	26427076	100	-	.	Parent=comp130896_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26426919	26426984	.	-	0	Parent=comp130896_c0_seq1.mrna1
Chr2	gffcl	locus	26427590	26428329	.	-	.	ID=RLOC_00015737;geneIDs=comp146393_c0_seq1.path1;transcripts=comp146393_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26427590	26428329	.	-	.	ID=comp146393_c0_seq1.mrna1;geneID=comp146393_c0_seq1.path1;Name=comp146393_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=740;mismatches=0;indels=0;unknowns=0;Target=comp146393_c0_seq1 740 1 .;CDS_Target=comp146393_c0_seq1 426 316 .;locus=RLOC_00015737
Chr2	stalkie_big_nohaplotig	exon	26427590	26428329	100	-	.	Parent=comp146393_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26427904	26428014	.	-	0	Parent=comp146393_c0_seq1.mrna1
Chr2	gffcl	locus	26446143	26450119	.	-	.	ID=RLOC_00015738;geneIDs=FBgn0034691.1.path1;transcripts=FBgn0034691.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26446143	26450119	.	-	.	ID=FBgn0034691.1.mrna1;geneID=FBgn0034691.1.path1;Name=FBgn0034691.1;Dir=sensecoverage=100.0;identity=99.8;matches=3714;mismatches=6;indels=0;unknowns=0;locus=RLOC_00015738
Chr2	stalkie_big_nohaplotig	exon	26446143	26447237	99	-	.	Parent=FBgn0034691.1.mrna1;Target=FBgn0034691.1 2626 3720 +
Chr2	stalkie_big_nohaplotig	exon	26447319	26447825	100	-	.	Parent=FBgn0034691.1.mrna1;Target=FBgn0034691.1 2119 2625 +
Chr2	stalkie_big_nohaplotig	exon	26447880	26448539	99	-	.	Parent=FBgn0034691.1.mrna1;Target=FBgn0034691.1 1459 2118 +
Chr2	stalkie_big_nohaplotig	exon	26448596	26449368	99	-	.	Parent=FBgn0034691.1.mrna1;Target=FBgn0034691.1 686 1458 +
Chr2	stalkie_big_nohaplotig	exon	26449435	26450119	100	-	.	Parent=FBgn0034691.1.mrna1;Target=FBgn0034691.1 1 685 +
Chr2	stalkie_big_nohaplotig	CDS	26446143	26447237	.	-	0	Parent=FBgn0034691.1.mrna1;Target=FBgn0034691.1 2626 3720 +
Chr2	stalkie_big_nohaplotig	CDS	26447319	26447825	.	-	0	Parent=FBgn0034691.1.mrna1;Target=FBgn0034691.1 2119 2625 +
Chr2	stalkie_big_nohaplotig	CDS	26447880	26448539	.	-	0	Parent=FBgn0034691.1.mrna1;Target=FBgn0034691.1 1459 2118 +
Chr2	stalkie_big_nohaplotig	CDS	26448596	26449368	.	-	2	Parent=FBgn0034691.1.mrna1;Target=FBgn0034691.1 686 1458 +
Chr2	stalkie_big_nohaplotig	CDS	26449435	26450119	.	-	0	Parent=FBgn0034691.1.mrna1;Target=FBgn0034691.1 1 685 +
Chr2	gffcl	locus	26453487	26454554	.	+	.	ID=RLOC_00015739;geneIDs=ORF1493.path1;transcripts=ORF1493.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26453487	26454554	.	+	.	ID=ORF1493.mrna1;geneID=ORF1493.path1;Name=ORF1493;Dir=indeterminatecoverage=98.6;identity=99.4;matches=1062;mismatches=6;indels=0;unknowns=0;Target=ORF1493 1068 1 .;locus=RLOC_00015739
Chr2	stalkie_big_nohaplotig	exon	26453487	26454554	99	+	.	Parent=ORF1493.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26453487	26454554	.	+	0	Parent=ORF1493.mrna1
Chr2	gffcl	locus	26458463	26460710	.	+	.	ID=RLOC_00015740;geneIDs=FBgn0034688.1.path1;transcripts=FBgn0034688.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26458463	26460710	.	+	.	ID=FBgn0034688.1.mrna1;geneID=FBgn0034688.1.path1;Name=FBgn0034688.1;Dir=sensecoverage=100.0;identity=99.9;matches=1532;mismatches=0;indels=1;unknowns=0;locus=RLOC_00015740
Chr2	stalkie_big_nohaplotig	exon	26458463	26458754	99	+	.	Parent=FBgn0034688.1.mrna1;Target=FBgn0034688.1 1 293 +
Chr2	stalkie_big_nohaplotig	exon	26458816	26458921	100	+	.	Parent=FBgn0034688.1.mrna1;Target=FBgn0034688.1 294 399 +
Chr2	stalkie_big_nohaplotig	exon	26459193	26459289	100	+	.	Parent=FBgn0034688.1.mrna1;Target=FBgn0034688.1 400 496 +
Chr2	stalkie_big_nohaplotig	exon	26459466	26459734	100	+	.	Parent=FBgn0034688.1.mrna1;Target=FBgn0034688.1 497 765 +
Chr2	stalkie_big_nohaplotig	exon	26459797	26460257	100	+	.	Parent=FBgn0034688.1.mrna1;Target=FBgn0034688.1 766 1226 +
Chr2	stalkie_big_nohaplotig	exon	26460332	26460471	100	+	.	Parent=FBgn0034688.1.mrna1;Target=FBgn0034688.1 1227 1366 +
Chr2	stalkie_big_nohaplotig	exon	26460544	26460710	100	+	.	Parent=FBgn0034688.1.mrna1;Target=FBgn0034688.1 1367 1533 +
Chr2	stalkie_big_nohaplotig	CDS	26458672	26458754	.	+	0	Parent=FBgn0034688.1.mrna1;Target=FBgn0034688.1 211 293 +
Chr2	stalkie_big_nohaplotig	CDS	26458816	26458921	.	+	1	Parent=FBgn0034688.1.mrna1;Target=FBgn0034688.1 294 399 +
Chr2	stalkie_big_nohaplotig	CDS	26459193	26459289	.	+	0	Parent=FBgn0034688.1.mrna1;Target=FBgn0034688.1 400 496 +
Chr2	stalkie_big_nohaplotig	CDS	26459466	26459734	.	+	2	Parent=FBgn0034688.1.mrna1;Target=FBgn0034688.1 497 765 +
Chr2	stalkie_big_nohaplotig	CDS	26459797	26460257	.	+	0	Parent=FBgn0034688.1.mrna1;Target=FBgn0034688.1 766 1226 +
Chr2	stalkie_big_nohaplotig	CDS	26460332	26460471	.	+	1	Parent=FBgn0034688.1.mrna1;Target=FBgn0034688.1 1227 1366 +
Chr2	stalkie_big_nohaplotig	CDS	26460544	26460710	.	+	2	Parent=FBgn0034688.1.mrna1;Target=FBgn0034688.1 1367 1533 +
Chr2	gffcl	locus	26461774	26462269	.	+	.	ID=RLOC_00015741;geneIDs=comp131770_c0_seq1.path1;transcripts=comp131770_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26461774	26462269	.	+	.	ID=comp131770_c0_seq1.mrna1;geneID=comp131770_c0_seq1.path1;Name=comp131770_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=485;mismatches=8;indels=5;unknowns=0;Target=comp131770_c0_seq1 495 1 .;CDS_Target=comp131770_c0_seq1 493 446 .;locus=RLOC_00015741
Chr2	stalkie_big_nohaplotig	exon	26461774	26462269	97	+	.	Parent=comp131770_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26462218	26462267	.	+	0	Parent=comp131770_c0_seq1.mrna1
Chr2	gffcl	locus	26464740	26494708	.	-	.	ID=RLOC_00015742;geneIDs=FBgn0029006.1.path1;transcripts=FBgn0029006.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26464740	26494708	.	-	.	ID=FBgn0029006.1.mrna1;geneID=FBgn0029006.1.path1;Name=FBgn0029006.1;Dir=sensecoverage=100.0;identity=99.9;matches=3302;mismatches=4;indels=0;unknowns=0;locus=RLOC_00015742
Chr2	stalkie_big_nohaplotig	exon	26464740	26465021	100	-	.	Parent=FBgn0029006.1.mrna1;Target=FBgn0029006.1 3025 3306 +
Chr2	stalkie_big_nohaplotig	exon	26465093	26465256	100	-	.	Parent=FBgn0029006.1.mrna1;Target=FBgn0029006.1 2861 3024 +
Chr2	stalkie_big_nohaplotig	exon	26465338	26465537	100	-	.	Parent=FBgn0029006.1.mrna1;Target=FBgn0029006.1 2661 2860 +
Chr2	stalkie_big_nohaplotig	exon	26465595	26465784	100	-	.	Parent=FBgn0029006.1.mrna1;Target=FBgn0029006.1 2471 2660 +
Chr2	stalkie_big_nohaplotig	exon	26465860	26466330	100	-	.	Parent=FBgn0029006.1.mrna1;Target=FBgn0029006.1 2000 2470 +
Chr2	stalkie_big_nohaplotig	exon	26466391	26467162	99	-	.	Parent=FBgn0029006.1.mrna1;Target=FBgn0029006.1 1228 1999 +
Chr2	stalkie_big_nohaplotig	exon	26467225	26468099	99	-	.	Parent=FBgn0029006.1.mrna1;Target=FBgn0029006.1 353 1227 +
Chr2	stalkie_big_nohaplotig	exon	26468195	26468431	100	-	.	Parent=FBgn0029006.1.mrna1;Target=FBgn0029006.1 116 352 +
Chr2	stalkie_big_nohaplotig	exon	26494518	26494556	100	-	.	Parent=FBgn0029006.1.mrna1;Target=FBgn0029006.1 77 115 +
Chr2	stalkie_big_nohaplotig	exon	26494633	26494708	100	-	.	Parent=FBgn0029006.1.mrna1;Target=FBgn0029006.1 1 76 +
Chr2	stalkie_big_nohaplotig	CDS	26464740	26465021	.	-	0	Parent=FBgn0029006.1.mrna1;Target=FBgn0029006.1 3025 3306 +
Chr2	stalkie_big_nohaplotig	CDS	26465093	26465256	.	-	2	Parent=FBgn0029006.1.mrna1;Target=FBgn0029006.1 2861 3024 +
Chr2	stalkie_big_nohaplotig	CDS	26465338	26465537	.	-	1	Parent=FBgn0029006.1.mrna1;Target=FBgn0029006.1 2661 2860 +
Chr2	stalkie_big_nohaplotig	CDS	26465595	26465784	.	-	2	Parent=FBgn0029006.1.mrna1;Target=FBgn0029006.1 2471 2660 +
Chr2	stalkie_big_nohaplotig	CDS	26465860	26466330	.	-	2	Parent=FBgn0029006.1.mrna1;Target=FBgn0029006.1 2000 2470 +
Chr2	stalkie_big_nohaplotig	CDS	26466391	26467162	.	-	0	Parent=FBgn0029006.1.mrna1;Target=FBgn0029006.1 1228 1999 +
Chr2	stalkie_big_nohaplotig	CDS	26467225	26468099	.	-	2	Parent=FBgn0029006.1.mrna1;Target=FBgn0029006.1 353 1227 +
Chr2	stalkie_big_nohaplotig	CDS	26468195	26468431	.	-	2	Parent=FBgn0029006.1.mrna1;Target=FBgn0029006.1 116 352 +
Chr2	stalkie_big_nohaplotig	CDS	26494518	26494556	.	-	2	Parent=FBgn0029006.1.mrna1;Target=FBgn0029006.1 77 115 +
Chr2	stalkie_big_nohaplotig	CDS	26494633	26494708	.	-	0	Parent=FBgn0029006.1.mrna1;Target=FBgn0029006.1 1 76 +
Chr2	gffcl	locus	26468656	26468959	.	+	.	ID=RLOC_00015743;geneIDs=comp127543_c0_seq1.path1;transcripts=comp127543_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26468656	26468959	.	+	.	ID=comp127543_c0_seq1.mrna1;geneID=comp127543_c0_seq1.path1;Name=comp127543_c0_seq1;Dir=indeterminatecoverage=93.0;identity=94.7;matches=301;mismatches=3;indels=14;unknowns=0;Target=comp127543_c0_seq1 328 11 .;CDS_Target=comp127543_c0_seq1 145 11 .;locus=RLOC_00015743
Chr2	stalkie_big_nohaplotig	exon	26468656	26468959	94	+	.	Parent=comp127543_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26468656	26468776	.	+	0	Parent=comp127543_c0_seq1.mrna1
Chr2	gffcl	locus	26470428	26470768	.	+	.	ID=RLOC_00015744;geneIDs=comp123810_c0_seq1.path1;transcripts=comp123810_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26470428	26470768	.	+	.	ID=comp123810_c0_seq1.mrna1;geneID=comp123810_c0_seq1.path1;Name=comp123810_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.1;matches=338;mismatches=3;indels=0;unknowns=0;Target=comp123810_c0_seq1 346 6 .;CDS_Target=comp123810_c0_seq1 136 8 .;locus=RLOC_00015744
Chr2	stalkie_big_nohaplotig	exon	26470428	26470768	99	+	.	Parent=comp123810_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26470430	26470558	.	+	0	Parent=comp123810_c0_seq1.mrna1
Chr2	gffcl	locus	26474993	26869032	.	-	.	ID=RLOC_00015745;geneIDs=comp146438_c0_seq1.path1;transcripts=comp146438_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26474993	26869032	.	-	.	ID=comp146438_c0_seq1.mrna1;geneID=comp146438_c0_seq1.path1;Name=comp146438_c0_seq1;Dir=indeterminatecoverage=62.1;identity=99.8;matches=518;mismatches=1;indels=0;unknowns=21;Target=comp146438_c0_seq1 867 763 .;locus=RLOC_00015745
Chr2	stalkie_big_nohaplotig	exon	26474993	26475473	99	-	.	Parent=comp146438_c0_seq1.mrna1;Target=comp146438_c0_seq1 869 389 .
Chr2	stalkie_big_nohaplotig	exon	26834089	26834093	100	-	.	Parent=comp146438_c0_seq1.mrna1;Target=comp146438_c0_seq1 388 384 .
Chr2	stalkie_big_nohaplotig	exon	26837048	26837063	100	-	.	Parent=comp146438_c0_seq1.mrna1;Target=comp146438_c0_seq1 383 368 .
Chr2	stalkie_big_nohaplotig	exon	26843453	26843455	100	-	.	Parent=comp146438_c0_seq1.mrna1;Target=comp146438_c0_seq1 367 365 .
Chr2	stalkie_big_nohaplotig	exon	26846897	26846900	100	-	.	Parent=comp146438_c0_seq1.mrna1;Target=comp146438_c0_seq1 364 361 .
Chr2	stalkie_big_nohaplotig	exon	26852088	26852108	100	-	.	Parent=comp146438_c0_seq1.mrna1;Target=comp146438_c0_seq1 360 340 .
Chr2	stalkie_big_nohaplotig	exon	26854943	26854944	100	-	.	Parent=comp146438_c0_seq1.mrna1;Target=comp146438_c0_seq1 339 338 .
Chr2	stalkie_big_nohaplotig	exon	26869025	26869032	100	-	.	Parent=comp146438_c0_seq1.mrna1;Target=comp146438_c0_seq1 337 330 .
Chr2	stalkie_big_nohaplotig	CDS	26474995	26475099	.	-	0	Parent=comp146438_c0_seq1.mrna1
Chr2	gffcl	locus	26499570	26500191	.	+	.	ID=RLOC_00015746;geneIDs=FBgn0050105.1.path1;transcripts=FBgn0050105.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26499570	26500191	.	+	.	ID=FBgn0050105.1.mrna1;geneID=FBgn0050105.1.path1;Name=FBgn0050105.1;Dir=sensecoverage=100.0;identity=99.8;matches=560;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015746
Chr2	stalkie_big_nohaplotig	exon	26499570	26500049	100	+	.	Parent=FBgn0050105.1.mrna1;Target=FBgn0050105.1 1 480 +
Chr2	stalkie_big_nohaplotig	exon	26500111	26500191	98	+	.	Parent=FBgn0050105.1.mrna1;Target=FBgn0050105.1 481 561 +
Chr2	stalkie_big_nohaplotig	CDS	26499570	26500049	.	+	0	Parent=FBgn0050105.1.mrna1;Target=FBgn0050105.1 1 480 +
Chr2	stalkie_big_nohaplotig	CDS	26500111	26500191	.	+	0	Parent=FBgn0050105.1.mrna1;Target=FBgn0050105.1 481 561 +
Chr2	gffcl	locus	26500337	26501038	.	-	.	ID=RLOC_00015747;geneIDs=FBgn0029079.1.path1;transcripts=FBgn0029079.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26500337	26501038	.	-	.	ID=FBgn0029079.1.mrna1;geneID=FBgn0029079.1.path1;Name=FBgn0029079.1;Dir=sensecoverage=100.0;identity=100.0;matches=645;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015747
Chr2	stalkie_big_nohaplotig	exon	26500337	26500847	100	-	.	Parent=FBgn0029079.1.mrna1;Target=FBgn0029079.1 135 645 +
Chr2	stalkie_big_nohaplotig	exon	26500905	26501038	100	-	.	Parent=FBgn0029079.1.mrna1;Target=FBgn0029079.1 1 134 +
Chr2	stalkie_big_nohaplotig	CDS	26500337	26500847	.	-	1	Parent=FBgn0029079.1.mrna1;Target=FBgn0029079.1 135 645 +
Chr2	stalkie_big_nohaplotig	CDS	26500905	26501038	.	-	0	Parent=FBgn0029079.1.mrna1;Target=FBgn0029079.1 1 134 +
Chr2	gffcl	locus	26502578	26503043	.	+	.	ID=RLOC_00015748;geneIDs=comp146787_c0_seq1.path1;transcripts=comp146787_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26502578	26503043	.	+	.	ID=comp146787_c0_seq1.mrna1;geneID=comp146787_c0_seq1.path1;Name=comp146787_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=455;mismatches=10;indels=1;unknowns=0;Target=comp146787_c0_seq1 465 1 .;CDS_Target=comp146787_c0_seq1 401 78 .;locus=RLOC_00015748
Chr2	stalkie_big_nohaplotig	exon	26502578	26503043	97	+	.	Parent=comp146787_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26502655	26502978	.	+	0	Parent=comp146787_c0_seq1.mrna1
Chr2	gffcl	locus	26505384	26520849	.	-	.	ID=RLOC_00015749;geneIDs=FBgn0021979.1.path1;transcripts=FBgn0021979.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26505384	26520849	.	-	.	ID=FBgn0021979.1.mrna1;geneID=FBgn0021979.1.path1;Name=FBgn0021979.1;Dir=sensecoverage=99.9;identity=99.9;matches=1213;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015749
Chr2	stalkie_big_nohaplotig	exon	26505384	26505702	99	-	.	Parent=FBgn0021979.1.mrna1;Target=FBgn0021979.1 897 1215 +
Chr2	stalkie_big_nohaplotig	exon	26505783	26505920	100	-	.	Parent=FBgn0021979.1.mrna1;Target=FBgn0021979.1 759 896 +
Chr2	stalkie_big_nohaplotig	exon	26507348	26507478	100	-	.	Parent=FBgn0021979.1.mrna1;Target=FBgn0021979.1 628 758 +
Chr2	stalkie_big_nohaplotig	exon	26507543	26507708	100	-	.	Parent=FBgn0021979.1.mrna1;Target=FBgn0021979.1 462 627 +
Chr2	stalkie_big_nohaplotig	exon	26508699	26508814	100	-	.	Parent=FBgn0021979.1.mrna1;Target=FBgn0021979.1 346 461 +
Chr2	stalkie_big_nohaplotig	exon	26520235	26520395	100	-	.	Parent=FBgn0021979.1.mrna1;Target=FBgn0021979.1 185 345 +
Chr2	stalkie_big_nohaplotig	exon	26520667	26520849	100	-	.	Parent=FBgn0021979.1.mrna1;Target=FBgn0021979.1 2 184 +
Chr2	stalkie_big_nohaplotig	CDS	26505384	26505702	.	-	1	Parent=FBgn0021979.1.mrna1;Target=FBgn0021979.1 897 1215 +
Chr2	stalkie_big_nohaplotig	CDS	26505783	26505920	.	-	1	Parent=FBgn0021979.1.mrna1;Target=FBgn0021979.1 759 896 +
Chr2	stalkie_big_nohaplotig	CDS	26507348	26507478	.	-	0	Parent=FBgn0021979.1.mrna1;Target=FBgn0021979.1 628 758 +
Chr2	stalkie_big_nohaplotig	CDS	26507543	26507708	.	-	1	Parent=FBgn0021979.1.mrna1;Target=FBgn0021979.1 462 627 +
Chr2	stalkie_big_nohaplotig	CDS	26508699	26508814	.	-	0	Parent=FBgn0021979.1.mrna1;Target=FBgn0021979.1 346 461 +
Chr2	stalkie_big_nohaplotig	CDS	26520235	26520395	.	-	2	Parent=FBgn0021979.1.mrna1;Target=FBgn0021979.1 185 345 +
Chr2	stalkie_big_nohaplotig	CDS	26520667	26520847	.	-	0	Parent=FBgn0021979.1.mrna1;Target=FBgn0021979.1 4 184 +
Chr2	gffcl	locus	26514215	26515031	.	-	.	ID=RLOC_00015750;geneIDs=comp145169_c0_seq1.path1;transcripts=comp145169_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26514215	26515031	.	-	.	ID=comp145169_c0_seq1.mrna1;geneID=comp145169_c0_seq1.path1;Name=comp145169_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.8;matches=766;mismatches=32;indels=19;unknowns=0;Target=comp145169_c0_seq1 798 1 .;CDS_Target=comp145169_c0_seq1 798 586 .;locus=RLOC_00015750
Chr2	stalkie_big_nohaplotig	exon	26514215	26515031	93	-	.	Parent=comp145169_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26514215	26514427	.	-	0	Parent=comp145169_c0_seq1.mrna1
Chr2	gffcl	locus	26522547	26522903	.	+	.	ID=RLOC_00015751;geneIDs=FBgn0050373.1.path1;transcripts=FBgn0050373.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26522547	26522903	.	+	.	ID=FBgn0050373.1.mrna1;geneID=FBgn0050373.1.path1;Name=FBgn0050373.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=354;mismatches=3;indels=0;unknowns=0;Target=FBgn0050373.1 357 1 .;locus=RLOC_00015751
Chr2	stalkie_big_nohaplotig	exon	26522547	26522903	99	+	.	Parent=FBgn0050373.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26522547	26522903	.	+	0	Parent=FBgn0050373.1.mrna1
Chr2	gffcl	locus	26524797	26527034	.	-	.	ID=RLOC_00015752;geneIDs=FBgn0033186.1.path1;transcripts=FBgn0033186.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26524797	26527034	.	-	.	ID=FBgn0033186.1.mrna1;geneID=FBgn0033186.1.path1;Name=FBgn0033186.1;Dir=sensecoverage=100.0;identity=99.3;matches=1990;mismatches=5;indels=9;unknowns=0;locus=RLOC_00015752
Chr2	stalkie_big_nohaplotig	exon	26524797	26525990	98	-	.	Parent=FBgn0033186.1.mrna1;Target=FBgn0033186.1 802 2004 +
Chr2	stalkie_big_nohaplotig	exon	26526046	26526120	100	-	.	Parent=FBgn0033186.1.mrna1;Target=FBgn0033186.1 727 801 +
Chr2	stalkie_big_nohaplotig	exon	26526188	26526563	100	-	.	Parent=FBgn0033186.1.mrna1;Target=FBgn0033186.1 351 726 +
Chr2	stalkie_big_nohaplotig	exon	26526615	26526938	99	-	.	Parent=FBgn0033186.1.mrna1;Target=FBgn0033186.1 27 350 +
Chr2	stalkie_big_nohaplotig	exon	26527009	26527034	100	-	.	Parent=FBgn0033186.1.mrna1;Target=FBgn0033186.1 1 26 +
Chr2	stalkie_big_nohaplotig	CDS	26524797	26525990	.	-	0	Parent=FBgn0033186.1.mrna1;Target=FBgn0033186.1 802 2004 +
Chr2	stalkie_big_nohaplotig	CDS	26526046	26526120	.	-	0	Parent=FBgn0033186.1.mrna1;Target=FBgn0033186.1 727 801 +
Chr2	stalkie_big_nohaplotig	CDS	26526188	26526563	.	-	1	Parent=FBgn0033186.1.mrna1;Target=FBgn0033186.1 351 726 +
Chr2	stalkie_big_nohaplotig	CDS	26526615	26526938	.	-	1	Parent=FBgn0033186.1.mrna1;Target=FBgn0033186.1 27 350 +
Chr2	stalkie_big_nohaplotig	CDS	26527009	26527034	.	-	0	Parent=FBgn0033186.1.mrna1;Target=FBgn0033186.1 1 26 +
Chr2	gffcl	locus	26528098	26528894	.	-	.	ID=RLOC_00015753;geneIDs=FBgn0050031.5.path1;transcripts=FBgn0050031.5.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26528098	26528894	.	-	.	ID=FBgn0050031.5.mrna1;geneID=FBgn0050031.5.path1;Name=FBgn0050031.5;Dir=indeterminatecoverage=97.3;identity=97.0;matches=779;mismatches=18;indels=6;unknowns=0;Target=FBgn0050031.5 825 23 .;CDS_Target=FBgn0050031.5 825 25 .;locus=RLOC_00015753
Chr2	stalkie_big_nohaplotig	exon	26528098	26528894	97	-	.	Parent=FBgn0050031.5.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26528098	26528892	.	-	0	Parent=FBgn0050031.5.mrna1
Chr2	gffcl	locus	26530659	26531474	.	-	.	ID=RLOC_00015754;geneIDs=FBgn0050031.2.path1,FBgn0050031.3.path1;transcripts=FBgn0050031.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26530659	26531474	.	-	.	ID=FBgn0050031.2.mrna1;geneID=FBgn0050031.2.path1;Name=FBgn0050031.2;Dir=indeterminatecoverage=100.0;identity=99.1;matches=812;mismatches=4;indels=3;unknowns=0;Target=FBgn0050031.2 819 1 .;locus=RLOC_00015754
Chr2	stalkie_big_nohaplotig	exon	26530659	26531474	99	-	.	Parent=FBgn0050031.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26530659	26531474	.	-	0	Parent=FBgn0050031.2.mrna1
Chr2	gffcl	locus	26540443	26541069	.	-	.	ID=RLOC_00015756;geneIDs=FBgn0050031.3.path2;transcripts=FBgn0050031.3.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	26540443	26541069	.	-	.	ID=FBgn0050031.3.mrna2;geneID=FBgn0050031.3.path2;Name=FBgn0050031.3;Dir=indeterminatecoverage=76.8;identity=96.0;matches=602;mismatches=25;indels=0;unknowns=0;Target=FBgn0050031.3 809 183 .;CDS_Target=FBgn0050031.3 807 183 .;locus=RLOC_00015756
Chr2	stalkie_big_nohaplotig	exon	26540443	26541069	96	-	.	Parent=FBgn0050031.3.mrna2
Chr2	stalkie_big_nohaplotig	CDS	26540445	26541069	.	-	2	Parent=FBgn0050031.3.mrna2
Chr2	gffcl	locus	26558934	26559739	.	-	.	ID=RLOC_00015757;geneIDs=FBgn0043470.3.path1;transcripts=FBgn0043470.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26558934	26559739	.	-	.	ID=FBgn0043470.3.mrna1;geneID=FBgn0043470.3.path1;Name=FBgn0043470.3;Dir=indeterminatecoverage=100.0;identity=98.2;matches=798;mismatches=8;indels=7;unknowns=0;Target=FBgn0043470.3 813 1 .;CDS_Target=FBgn0043470.3 59 3 .;locus=RLOC_00015757
Chr2	stalkie_big_nohaplotig	exon	26558934	26559739	98	-	.	Parent=FBgn0043470.3.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26559688	26559737	.	-	0	Parent=FBgn0043470.3.mrna1
Chr2	gffcl	locus	26561806	26562579	.	-	.	ID=RLOC_00015758;geneIDs=FBgn0050025.1.path1;transcripts=FBgn0050025.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26561806	26562579	.	-	.	ID=FBgn0050025.1.mrna1;geneID=FBgn0050025.1.path1;Name=FBgn0050025.1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=774;mismatches=0;indels=21;unknowns=0;Target=FBgn0050025.1 795 1 .;locus=RLOC_00015758
Chr2	stalkie_big_nohaplotig	exon	26561806	26562579	97	-	.	Parent=FBgn0050025.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26561806	26562579	.	-	0	Parent=FBgn0050025.1.mrna1
Chr2	gffcl	locus	26563711	26565767	.	-	.	ID=RLOC_00015759;geneIDs=comp135662_c0_seq1.path1;transcripts=comp135662_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26563711	26565767	.	-	.	ID=comp135662_c0_seq1.mrna1;geneID=comp135662_c0_seq1.path1;Name=comp135662_c0_seq1;Dir=antisensecoverage=100.0;identity=95.6;matches=503;mismatches=7;indels=16;unknowns=0;locus=RLOC_00015759
Chr2	stalkie_big_nohaplotig	exon	26563711	26563982	91	-	.	Parent=comp135662_c0_seq1.mrna1;Target=comp135662_c0_seq1 1 258 -
Chr2	stalkie_big_nohaplotig	exon	26565515	26565767	99	-	.	Parent=comp135662_c0_seq1.mrna1;Target=comp135662_c0_seq1 259 511 -
Chr2	stalkie_big_nohaplotig	CDS	26563917	26563982	.	-	1	Parent=comp135662_c0_seq1.mrna1;Target=comp135662_c0_seq1 192 258 .
Chr2	stalkie_big_nohaplotig	CDS	26565515	26565672	.	-	0	Parent=comp135662_c0_seq1.mrna1;Target=comp135662_c0_seq1 259 416 .
Chr2	gffcl	locus	26569117	26570958	.	-	.	ID=RLOC_00015760;geneIDs=FBgn0033624.1.path1;transcripts=FBgn0033624.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26569117	26570958	.	-	.	ID=FBgn0033624.1.mrna1;geneID=FBgn0033624.1.path1;Name=FBgn0033624.1;Dir=sensecoverage=100.0;identity=100.0;matches=303;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015760
Chr2	stalkie_big_nohaplotig	exon	26569117	26569272	100	-	.	Parent=FBgn0033624.1.mrna1;Target=FBgn0033624.1 148 303 +
Chr2	stalkie_big_nohaplotig	exon	26569334	26569422	100	-	.	Parent=FBgn0033624.1.mrna1;Target=FBgn0033624.1 59 147 +
Chr2	stalkie_big_nohaplotig	exon	26570901	26570958	100	-	.	Parent=FBgn0033624.1.mrna1;Target=FBgn0033624.1 1 58 +
Chr2	stalkie_big_nohaplotig	CDS	26569117	26569272	.	-	0	Parent=FBgn0033624.1.mrna1;Target=FBgn0033624.1 148 303 +
Chr2	stalkie_big_nohaplotig	CDS	26569334	26569422	.	-	2	Parent=FBgn0033624.1.mrna1;Target=FBgn0033624.1 59 147 +
Chr2	stalkie_big_nohaplotig	CDS	26570901	26570958	.	-	0	Parent=FBgn0033624.1.mrna1;Target=FBgn0033624.1 1 58 +
Chr2	gffcl	locus	26573165	26574538	.	+	.	ID=RLOC_00015761;geneIDs=FBgn0033428.1.path1;transcripts=FBgn0033428.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26573165	26574538	.	+	.	ID=FBgn0033428.1.mrna1;geneID=FBgn0033428.1.path1;Name=FBgn0033428.1;Dir=sensecoverage=100.0;identity=99.3;matches=1123;mismatches=8;indels=0;unknowns=0;locus=RLOC_00015761
Chr2	stalkie_big_nohaplotig	exon	26573165	26573242	97	+	.	Parent=FBgn0033428.1.mrna1;Target=FBgn0033428.1 1 78 +
Chr2	stalkie_big_nohaplotig	exon	26573303	26573587	100	+	.	Parent=FBgn0033428.1.mrna1;Target=FBgn0033428.1 79 363 +
Chr2	stalkie_big_nohaplotig	exon	26573646	26573804	100	+	.	Parent=FBgn0033428.1.mrna1;Target=FBgn0033428.1 364 522 +
Chr2	stalkie_big_nohaplotig	exon	26573874	26574173	99	+	.	Parent=FBgn0033428.1.mrna1;Target=FBgn0033428.1 523 822 +
Chr2	stalkie_big_nohaplotig	exon	26574230	26574538	98	+	.	Parent=FBgn0033428.1.mrna1;Target=FBgn0033428.1 823 1131 +
Chr2	stalkie_big_nohaplotig	CDS	26573165	26573242	.	+	0	Parent=FBgn0033428.1.mrna1;Target=FBgn0033428.1 1 78 +
Chr2	stalkie_big_nohaplotig	CDS	26573303	26573587	.	+	0	Parent=FBgn0033428.1.mrna1;Target=FBgn0033428.1 79 363 +
Chr2	stalkie_big_nohaplotig	CDS	26573646	26573804	.	+	0	Parent=FBgn0033428.1.mrna1;Target=FBgn0033428.1 364 522 +
Chr2	stalkie_big_nohaplotig	CDS	26573874	26574173	.	+	0	Parent=FBgn0033428.1.mrna1;Target=FBgn0033428.1 523 822 +
Chr2	stalkie_big_nohaplotig	CDS	26574230	26574538	.	+	0	Parent=FBgn0033428.1.mrna1;Target=FBgn0033428.1 823 1131 +
Chr2	gffcl	locus	26575057	26575602	.	-	.	ID=RLOC_00015762;geneIDs=FBgn0033429.1.path1;transcripts=FBgn0033429.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26575057	26575602	.	-	.	ID=FBgn0033429.1.mrna1;geneID=FBgn0033429.1.path1;Name=FBgn0033429.1;Dir=sensecoverage=100.0;identity=98.6;matches=420;mismatches=6;indels=0;unknowns=0;locus=RLOC_00015762
Chr2	stalkie_big_nohaplotig	exon	26575057	26575142	100	-	.	Parent=FBgn0033429.1.mrna1;Target=FBgn0033429.1 341 426 +
Chr2	stalkie_big_nohaplotig	exon	26575205	26575507	98	-	.	Parent=FBgn0033429.1.mrna1;Target=FBgn0033429.1 38 340 +
Chr2	stalkie_big_nohaplotig	exon	26575566	26575602	94	-	.	Parent=FBgn0033429.1.mrna1;Target=FBgn0033429.1 1 37 +
Chr2	stalkie_big_nohaplotig	CDS	26575057	26575142	.	-	2	Parent=FBgn0033429.1.mrna1;Target=FBgn0033429.1 341 426 +
Chr2	stalkie_big_nohaplotig	CDS	26575205	26575507	.	-	2	Parent=FBgn0033429.1.mrna1;Target=FBgn0033429.1 38 340 +
Chr2	stalkie_big_nohaplotig	CDS	26575566	26575602	.	-	0	Parent=FBgn0033429.1.mrna1;Target=FBgn0033429.1 1 37 +
Chr2	gffcl	locus	26576819	26577275	.	+	.	ID=RLOC_00015763;geneIDs=FBgn0025286.1.path1;transcripts=FBgn0025286.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26576819	26577275	.	+	.	ID=FBgn0025286.1.mrna1;geneID=FBgn0025286.1.path1;Name=FBgn0025286.1;Dir=sensecoverage=100.0;identity=99.5;matches=382;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015763
Chr2	stalkie_big_nohaplotig	exon	26576819	26577054	99	+	.	Parent=FBgn0025286.1.mrna1;Target=FBgn0025286.1 1 236 +
Chr2	stalkie_big_nohaplotig	exon	26577128	26577275	99	+	.	Parent=FBgn0025286.1.mrna1;Target=FBgn0025286.1 237 384 +
Chr2	stalkie_big_nohaplotig	CDS	26576819	26577054	.	+	0	Parent=FBgn0025286.1.mrna1;Target=FBgn0025286.1 1 236 +
Chr2	stalkie_big_nohaplotig	CDS	26577128	26577275	.	+	1	Parent=FBgn0025286.1.mrna1;Target=FBgn0025286.1 237 384 +
Chr2	gffcl	locus	26584705	26585737	.	+	.	ID=RLOC_00015765;geneIDs=FBgn0010342.1.path1;transcripts=FBgn0010342.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26584705	26585737	.	+	.	ID=FBgn0010342.1.mrna1;geneID=FBgn0010342.1.path1;Name=FBgn0010342.1;Dir=sensecoverage=100.0;identity=99.6;matches=965;mismatches=3;indels=1;unknowns=0;Target=FBgn0010342.1 3 221 +;locus=RLOC_00015765
Chr2	stalkie_big_nohaplotig	exon	26584705	26585019	99	+	.	Parent=FBgn0010342.1.mrna1;Target=FBgn0010342.1 1 316 +
Chr2	stalkie_big_nohaplotig	exon	26585085	26585737	99	+	.	Parent=FBgn0010342.1.mrna1;Target=FBgn0010342.1 317 969 +
Chr2	stalkie_big_nohaplotig	CDS	26584707	26584924	.	+	0	Parent=FBgn0010342.1.mrna1
Chr2	gffcl	locus	26589421	26590201	.	-	.	ID=RLOC_00015766;geneIDs=FBgn0050025.2.path1;transcripts=FBgn0050025.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26589421	26590201	.	-	.	ID=FBgn0050025.2.mrna1;geneID=FBgn0050025.2.path1;Name=FBgn0050025.2;Dir=indeterminatecoverage=99.1;identity=94.9;matches=742;mismatches=39;indels=1;unknowns=0;Target=FBgn0050025.2 782 1 .;CDS_Target=FBgn0050025.2 780 4 .;locus=RLOC_00015766
Chr2	stalkie_big_nohaplotig	exon	26589421	26590201	94	-	.	Parent=FBgn0050025.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26589423	26590199	.	-	0	Parent=FBgn0050025.2.mrna1
Chr2	gffcl	locus	26592332	26593120	.	-	.	ID=RLOC_00015767;geneIDs=FBgn0050025.3.path1;transcripts=FBgn0050025.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26592332	26593120	.	-	.	ID=FBgn0050025.3.mrna1;geneID=FBgn0050025.3.path1;Name=FBgn0050025.3;Dir=indeterminatecoverage=100.0;identity=99.9;matches=788;mismatches=1;indels=0;unknowns=0;Target=FBgn0050025.3 789 1 .;locus=RLOC_00015767
Chr2	stalkie_big_nohaplotig	exon	26592332	26593120	99	-	.	Parent=FBgn0050025.3.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26592332	26593120	.	-	0	Parent=FBgn0050025.3.mrna1
Chr2	gffcl	locus	26613857	26614629	.	-	.	ID=RLOC_00015768;geneIDs=FBgn0050339.1.path1;transcripts=FBgn0050339.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26613857	26614629	.	-	.	ID=FBgn0050339.1.mrna1;geneID=FBgn0050339.1.path1;Name=FBgn0050339.1;Dir=sensecoverage=100.0;identity=99.1;matches=684;mismatches=6;indels=0;unknowns=0;locus=RLOC_00015768
Chr2	stalkie_big_nohaplotig	exon	26613857	26614232	98	-	.	Parent=FBgn0050339.1.mrna1;Target=FBgn0050339.1 315 690 +
Chr2	stalkie_big_nohaplotig	exon	26614316	26614629	99	-	.	Parent=FBgn0050339.1.mrna1;Target=FBgn0050339.1 1 314 +
Chr2	stalkie_big_nohaplotig	CDS	26613857	26614232	.	-	1	Parent=FBgn0050339.1.mrna1;Target=FBgn0050339.1 315 690 +
Chr2	stalkie_big_nohaplotig	CDS	26614316	26614629	.	-	0	Parent=FBgn0050339.1.mrna1;Target=FBgn0050339.1 1 314 +
Chr2	gffcl	locus	26621490	26622900	.	+	.	ID=RLOC_00015769;geneIDs=FBgn0033434.1.path1;transcripts=FBgn0033434.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26621490	26622900	.	+	.	ID=FBgn0033434.1.mrna1;geneID=FBgn0033434.1.path1;Name=FBgn0033434.1;Dir=sensecoverage=100.0;identity=100.0;matches=921;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015769
Chr2	stalkie_big_nohaplotig	exon	26621490	26621797	100	+	.	Parent=FBgn0033434.1.mrna1;Target=FBgn0033434.1 1 308 +
Chr2	stalkie_big_nohaplotig	exon	26622006	26622372	100	+	.	Parent=FBgn0033434.1.mrna1;Target=FBgn0033434.1 309 675 +
Chr2	stalkie_big_nohaplotig	exon	26622655	26622900	100	+	.	Parent=FBgn0033434.1.mrna1;Target=FBgn0033434.1 676 921 +
Chr2	stalkie_big_nohaplotig	CDS	26621490	26621797	.	+	0	Parent=FBgn0033434.1.mrna1;Target=FBgn0033434.1 1 308 +
Chr2	stalkie_big_nohaplotig	CDS	26622006	26622372	.	+	1	Parent=FBgn0033434.1.mrna1;Target=FBgn0033434.1 309 675 +
Chr2	stalkie_big_nohaplotig	CDS	26622655	26622900	.	+	0	Parent=FBgn0033434.1.mrna1;Target=FBgn0033434.1 676 921 +
Chr2	gffcl	locus	26627811	26628513	.	+	.	ID=RLOC_00015770;geneIDs=FBgn0050000.1.path1;transcripts=FBgn0050000.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26627811	26628513	.	+	.	ID=FBgn0050000.1.mrna1;geneID=FBgn0050000.1.path1;Name=FBgn0050000.1;Dir=sensecoverage=99.6;identity=99.5;matches=547;mismatches=2;indels=1;unknowns=0;locus=RLOC_00015770
Chr2	stalkie_big_nohaplotig	exon	26627811	26627917	98	+	.	Parent=FBgn0050000.1.mrna1;Target=FBgn0050000.1 3 110 +
Chr2	stalkie_big_nohaplotig	exon	26628005	26628324	100	+	.	Parent=FBgn0050000.1.mrna1;Target=FBgn0050000.1 111 430 +
Chr2	stalkie_big_nohaplotig	exon	26628392	26628513	99	+	.	Parent=FBgn0050000.1.mrna1;Target=FBgn0050000.1 431 552 +
Chr2	stalkie_big_nohaplotig	CDS	26627811	26627917	.	+	0	Parent=FBgn0050000.1.mrna1;Target=FBgn0050000.1 3 110 +
Chr2	stalkie_big_nohaplotig	CDS	26628005	26628016	.	+	1	Parent=FBgn0050000.1.mrna1;Target=FBgn0050000.1 111 122 +
Chr2	gffcl	locus	26632073	26635073	.	-	.	ID=RLOC_00015771;geneIDs=FBgn0033437.1.path1;transcripts=FBgn0033437.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26632073	26635073	.	-	.	ID=FBgn0033437.1.mrna1;geneID=FBgn0033437.1.path1;Name=FBgn0033437.1;Dir=sensecoverage=100.0;identity=100.0;matches=981;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015771
Chr2	stalkie_big_nohaplotig	exon	26632073	26632324	100	-	.	Parent=FBgn0033437.1.mrna1;Target=FBgn0033437.1 730 981 +
Chr2	stalkie_big_nohaplotig	exon	26632390	26632762	100	-	.	Parent=FBgn0033437.1.mrna1;Target=FBgn0033437.1 357 729 +
Chr2	stalkie_big_nohaplotig	exon	26632837	26633175	100	-	.	Parent=FBgn0033437.1.mrna1;Target=FBgn0033437.1 18 356 +
Chr2	stalkie_big_nohaplotig	exon	26635057	26635073	100	-	.	Parent=FBgn0033437.1.mrna1;Target=FBgn0033437.1 1 17 +
Chr2	stalkie_big_nohaplotig	CDS	26632073	26632324	.	-	0	Parent=FBgn0033437.1.mrna1;Target=FBgn0033437.1 730 981 +
Chr2	stalkie_big_nohaplotig	CDS	26632390	26632762	.	-	1	Parent=FBgn0033437.1.mrna1;Target=FBgn0033437.1 357 729 +
Chr2	stalkie_big_nohaplotig	CDS	26632837	26633175	.	-	1	Parent=FBgn0033437.1.mrna1;Target=FBgn0033437.1 18 356 +
Chr2	stalkie_big_nohaplotig	CDS	26635057	26635073	.	-	0	Parent=FBgn0033437.1.mrna1;Target=FBgn0033437.1 1 17 +
Chr2	gffcl	locus	26635574	26635922	.	+	.	ID=RLOC_00015772;geneIDs=comp144593_c0_seq1.path1;transcripts=comp144593_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26635574	26635922	.	+	.	ID=comp144593_c0_seq1.mrna1;geneID=comp144593_c0_seq1.path1;Name=comp144593_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=290;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015772
Chr2	stalkie_big_nohaplotig	exon	26635574	26635637	100	+	.	Parent=comp144593_c0_seq1.mrna1;Target=comp144593_c0_seq1 1 64 +
Chr2	stalkie_big_nohaplotig	exon	26635697	26635922	100	+	.	Parent=comp144593_c0_seq1.mrna1;Target=comp144593_c0_seq1 65 290 +
Chr2	stalkie_big_nohaplotig	CDS	26635575	26635637	.	+	0	Parent=comp144593_c0_seq1.mrna1;Target=comp144593_c0_seq1 2 64 +
Chr2	stalkie_big_nohaplotig	CDS	26635697	26635705	.	+	0	Parent=comp144593_c0_seq1.mrna1;Target=comp144593_c0_seq1 65 73 +
Chr2	gffcl	locus	26636581	26636947	.	+	.	ID=RLOC_00015773;geneIDs=comp78908_c0_seq1.path1;transcripts=comp78908_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26636581	26636947	.	+	.	ID=comp78908_c0_seq1.mrna1;geneID=comp78908_c0_seq1.path1;Name=comp78908_c0_seq1;Dir=indeterminatecoverage=94.6;identity=100.0;matches=367;mismatches=0;indels=0;unknowns=0;Target=comp78908_c0_seq1 388 22 .;CDS_Target=comp78908_c0_seq1 71 24 .;locus=RLOC_00015773
Chr2	stalkie_big_nohaplotig	exon	26636581	26636947	100	+	.	Parent=comp78908_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26636583	26636630	.	+	0	Parent=comp78908_c0_seq1.mrna1
Chr2	gffcl	locus	26641382	26643269	.	+	.	ID=RLOC_00015774;geneIDs=FBgn0031782.1.path1;transcripts=FBgn0031782.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26641382	26643269	.	+	.	ID=FBgn0031782.1.mrna1;geneID=FBgn0031782.1.path1;Name=FBgn0031782.1;Dir=sensecoverage=100.0;identity=98.8;matches=1233;mismatches=15;indels=0;unknowns=0;locus=RLOC_00015774
Chr2	stalkie_big_nohaplotig	exon	26641382	26641460	97	+	.	Parent=FBgn0031782.1.mrna1;Target=FBgn0031782.1 1 79 +
Chr2	stalkie_big_nohaplotig	exon	26641778	26641966	98	+	.	Parent=FBgn0031782.1.mrna1;Target=FBgn0031782.1 80 268 +
Chr2	stalkie_big_nohaplotig	exon	26642031	26642211	99	+	.	Parent=FBgn0031782.1.mrna1;Target=FBgn0031782.1 269 449 +
Chr2	stalkie_big_nohaplotig	exon	26642408	26642596	98	+	.	Parent=FBgn0031782.1.mrna1;Target=FBgn0031782.1 450 638 +
Chr2	stalkie_big_nohaplotig	exon	26642660	26643269	98	+	.	Parent=FBgn0031782.1.mrna1;Target=FBgn0031782.1 639 1248 +
Chr2	stalkie_big_nohaplotig	CDS	26641382	26641460	.	+	0	Parent=FBgn0031782.1.mrna1;Target=FBgn0031782.1 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	26641778	26641966	.	+	2	Parent=FBgn0031782.1.mrna1;Target=FBgn0031782.1 80 268 +
Chr2	stalkie_big_nohaplotig	CDS	26642031	26642211	.	+	2	Parent=FBgn0031782.1.mrna1;Target=FBgn0031782.1 269 449 +
Chr2	stalkie_big_nohaplotig	CDS	26642408	26642596	.	+	1	Parent=FBgn0031782.1.mrna1;Target=FBgn0031782.1 450 638 +
Chr2	stalkie_big_nohaplotig	CDS	26642660	26643269	.	+	1	Parent=FBgn0031782.1.mrna1;Target=FBgn0031782.1 639 1248 +
Chr2	gffcl	locus	26644506	26649478	.	+	.	ID=RLOC_00015775;geneIDs=FBgn0012036.1.path1;transcripts=FBgn0012036.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26644506	26649478	.	+	.	ID=FBgn0012036.1.mrna1;geneID=FBgn0012036.1.path1;Name=FBgn0012036.1;Dir=sensecoverage=100.0;identity=99.8;matches=1572;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015775
Chr2	stalkie_big_nohaplotig	exon	26644506	26644643	100	+	.	Parent=FBgn0012036.1.mrna1;Target=FBgn0012036.1 1 138 +
Chr2	stalkie_big_nohaplotig	exon	26647894	26648042	100	+	.	Parent=FBgn0012036.1.mrna1;Target=FBgn0012036.1 139 287 +
Chr2	stalkie_big_nohaplotig	exon	26648119	26648215	100	+	.	Parent=FBgn0012036.1.mrna1;Target=FBgn0012036.1 288 384 +
Chr2	stalkie_big_nohaplotig	exon	26648288	26649478	99	+	.	Parent=FBgn0012036.1.mrna1;Target=FBgn0012036.1 385 1575 +
Chr2	stalkie_big_nohaplotig	CDS	26644506	26644643	.	+	0	Parent=FBgn0012036.1.mrna1;Target=FBgn0012036.1 1 138 +
Chr2	stalkie_big_nohaplotig	CDS	26647894	26648042	.	+	0	Parent=FBgn0012036.1.mrna1;Target=FBgn0012036.1 139 287 +
Chr2	stalkie_big_nohaplotig	CDS	26648119	26648215	.	+	1	Parent=FBgn0012036.1.mrna1;Target=FBgn0012036.1 288 384 +
Chr2	stalkie_big_nohaplotig	CDS	26648288	26649478	.	+	0	Parent=FBgn0012036.1.mrna1;Target=FBgn0012036.1 385 1575 +
Chr2	gffcl	locus	26649988	26651030	.	-	.	ID=RLOC_00015776;geneIDs=FBgn0053966.1.path1,comp149565_c1_seq1.path1;transcripts=comp149565_c1_seq1.mrna1,FBgn0053966.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26649988	26651030	.	-	.	ID=comp149565_c1_seq1.mrna1;geneID=comp149565_c1_seq1.path1;Name=comp149565_c1_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=985;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015776
Chr2	stalkie_big_nohaplotig	exon	26649988	26650069	100	-	.	Parent=comp149565_c1_seq1.mrna1;Target=comp149565_c1_seq1 905 986 +
Chr2	stalkie_big_nohaplotig	exon	26650127	26651030	99	-	.	Parent=comp149565_c1_seq1.mrna1;Target=comp149565_c1_seq1 1 904 +
Chr2	stalkie_big_nohaplotig	CDS	26649989	26650069	.	-	0	Parent=comp149565_c1_seq1.mrna1;Target=comp149565_c1_seq1 905 985 +
Chr2	stalkie_big_nohaplotig	CDS	26650127	26650450	.	-	0	Parent=comp149565_c1_seq1.mrna1;Target=comp149565_c1_seq1 581 904 +
Chr2	stalkie_big_nohaplotig	mRNA	26649989	26650865	.	-	.	ID=FBgn0053966.1.mrna1;geneID=FBgn0053966.1.path1;Name=FBgn0053966.1;Dir=sensecoverage=100.0;identity=100.0;matches=759;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015776
Chr2	stalkie_big_nohaplotig	exon	26649989	26650069	100	-	.	Parent=FBgn0053966.1.mrna1;Target=FBgn0053966.1 679 759 +
Chr2	stalkie_big_nohaplotig	exon	26650127	26650499	100	-	.	Parent=FBgn0053966.1.mrna1;Target=FBgn0053966.1 306 678 +
Chr2	stalkie_big_nohaplotig	exon	26650561	26650865	100	-	.	Parent=FBgn0053966.1.mrna1;Target=FBgn0053966.1 1 305 +
Chr2	stalkie_big_nohaplotig	CDS	26649989	26650069	.	-	0	Parent=FBgn0053966.1.mrna1;Target=FBgn0053966.1 679 759 +
Chr2	stalkie_big_nohaplotig	CDS	26650127	26650499	.	-	1	Parent=FBgn0053966.1.mrna1;Target=FBgn0053966.1 306 678 +
Chr2	stalkie_big_nohaplotig	CDS	26650561	26650865	.	-	0	Parent=FBgn0053966.1.mrna1;Target=FBgn0053966.1 1 305 +
Chr2	gffcl	locus	26653682	26654535	.	-	.	ID=RLOC_00015777;geneIDs=FBgn0053514.2.path1;transcripts=FBgn0053514.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26653682	26654535	.	-	.	ID=FBgn0053514.2.mrna1;geneID=FBgn0053514.2.path1;Name=FBgn0053514.2;Dir=sensecoverage=100.0;identity=100.0;matches=717;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015777
Chr2	stalkie_big_nohaplotig	exon	26653682	26653936	100	-	.	Parent=FBgn0053514.2.mrna1;Target=FBgn0053514.2 463 717 +
Chr2	stalkie_big_nohaplotig	exon	26653998	26654367	100	-	.	Parent=FBgn0053514.2.mrna1;Target=FBgn0053514.2 93 462 +
Chr2	stalkie_big_nohaplotig	exon	26654444	26654535	100	-	.	Parent=FBgn0053514.2.mrna1;Target=FBgn0053514.2 1 92 +
Chr2	stalkie_big_nohaplotig	CDS	26653682	26653936	.	-	0	Parent=FBgn0053514.2.mrna1;Target=FBgn0053514.2 463 717 +
Chr2	stalkie_big_nohaplotig	CDS	26653998	26654367	.	-	1	Parent=FBgn0053514.2.mrna1;Target=FBgn0053514.2 93 462 +
Chr2	stalkie_big_nohaplotig	CDS	26654444	26654535	.	-	0	Parent=FBgn0053514.2.mrna1;Target=FBgn0053514.2 1 92 +
Chr2	gffcl	locus	26657540	26658220	.	-	.	ID=RLOC_00015778;geneIDs=FBgn0053514.1.path1;transcripts=FBgn0053514.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26657540	26658220	.	-	.	ID=FBgn0053514.1.mrna1;geneID=FBgn0053514.1.path1;Name=FBgn0053514.1;Dir=sensecoverage=100.0;identity=100.0;matches=609;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015778
Chr2	stalkie_big_nohaplotig	exon	26657540	26657837	100	-	.	Parent=FBgn0053514.1.mrna1;Target=FBgn0053514.1 312 609 +
Chr2	stalkie_big_nohaplotig	exon	26657910	26658220	100	-	.	Parent=FBgn0053514.1.mrna1;Target=FBgn0053514.1 1 311 +
Chr2	stalkie_big_nohaplotig	CDS	26657540	26657837	.	-	1	Parent=FBgn0053514.1.mrna1;Target=FBgn0053514.1 312 609 +
Chr2	stalkie_big_nohaplotig	CDS	26657910	26658220	.	-	0	Parent=FBgn0053514.1.mrna1;Target=FBgn0053514.1 1 311 +
Chr2	gffcl	locus	26659100	26659785	.	.	.	ID=RLOC_00015779;geneIDs=FBgn0053514.4.path1,comp113247_c0_seq1.path1;transcripts=FBgn0053514.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26659100	26659785	.	-	.	ID=FBgn0053514.4.mrna1;geneID=FBgn0053514.4.path1;Name=FBgn0053514.4;Dir=sensecoverage=100.0;identity=93.0;matches=569;mismatches=43;indels=0;unknowns=0;locus=RLOC_00015779
Chr2	stalkie_big_nohaplotig	exon	26659100	26659354	99	-	.	Parent=FBgn0053514.4.mrna1;Target=FBgn0053514.4 358 612 +
Chr2	stalkie_big_nohaplotig	exon	26659429	26659785	88	-	.	Parent=FBgn0053514.4.mrna1;Target=FBgn0053514.4 1 357 +
Chr2	stalkie_big_nohaplotig	CDS	26659100	26659354	.	-	0	Parent=FBgn0053514.4.mrna1;Target=FBgn0053514.4 358 612 +
Chr2	stalkie_big_nohaplotig	CDS	26659429	26659785	.	-	0	Parent=FBgn0053514.4.mrna1;Target=FBgn0053514.4 1 357 +
Chr2	gffcl	locus	26666132	26666961	.	-	.	ID=RLOC_00015780;geneIDs=FBgn0053514.5.path1;transcripts=FBgn0053514.5.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26666132	26666961	.	-	.	ID=FBgn0053514.5.mrna1;geneID=FBgn0053514.5.path1;Name=FBgn0053514.5;Dir=sensecoverage=74.9;identity=98.4;matches=759;mismatches=12;indels=0;unknowns=0;locus=RLOC_00015780
Chr2	stalkie_big_nohaplotig	exon	26666132	26666495	97	-	.	Parent=FBgn0053514.5.mrna1;Target=FBgn0053514.5 408 771 +
Chr2	stalkie_big_nohaplotig	exon	26666555	26666961	99	-	.	Parent=FBgn0053514.5.mrna1;Target=FBgn0053514.5 1 407 +
Chr2	stalkie_big_nohaplotig	CDS	26666132	26666495	.	-	1	Parent=FBgn0053514.5.mrna1;Target=FBgn0053514.5 408 771 +
Chr2	stalkie_big_nohaplotig	CDS	26666555	26666961	.	-	0	Parent=FBgn0053514.5.mrna1;Target=FBgn0053514.5 1 407 +
Chr2	gffcl	locus	26668068	26688437	.	-	.	ID=RLOC_00015781;geneIDs=FBgn0053965.1.path1;transcripts=FBgn0053965.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26668068	26688437	.	-	.	ID=FBgn0053965.1.mrna1;geneID=FBgn0053965.1.path1;Name=FBgn0053965.1;Dir=sensecoverage=100.0;identity=99.7;matches=954;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015781
Chr2	stalkie_big_nohaplotig	exon	26668068	26668319	98	-	.	Parent=FBgn0053965.1.mrna1;Target=FBgn0053965.1 706 957 +
Chr2	stalkie_big_nohaplotig	exon	26668384	26668756	100	-	.	Parent=FBgn0053965.1.mrna1;Target=FBgn0053965.1 333 705 +
Chr2	stalkie_big_nohaplotig	exon	26688106	26688437	100	-	.	Parent=FBgn0053965.1.mrna1;Target=FBgn0053965.1 1 332 +
Chr2	stalkie_big_nohaplotig	CDS	26668068	26668319	.	-	0	Parent=FBgn0053965.1.mrna1;Target=FBgn0053965.1 706 957 +
Chr2	stalkie_big_nohaplotig	CDS	26668384	26668756	.	-	1	Parent=FBgn0053965.1.mrna1;Target=FBgn0053965.1 333 705 +
Chr2	stalkie_big_nohaplotig	CDS	26688106	26688437	.	-	0	Parent=FBgn0053965.1.mrna1;Target=FBgn0053965.1 1 332 +
Chr2	gffcl	locus	26676378	26706712	.	-	.	ID=RLOC_00015782;geneIDs=FBgn0264272.1.path1;transcripts=FBgn0264272.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26676378	26706712	.	-	.	ID=FBgn0264272.1.mrna1;geneID=FBgn0264272.1.path1;Name=FBgn0264272.1;Dir=sensecoverage=100.0;identity=99.8;matches=2587;mismatches=5;indels=0;unknowns=0;locus=RLOC_00015782
Chr2	stalkie_big_nohaplotig	exon	26676378	26677661	99	-	.	Parent=FBgn0264272.1.mrna1;Target=FBgn0264272.1 1309 2592 +
Chr2	stalkie_big_nohaplotig	exon	26677722	26677874	100	-	.	Parent=FBgn0264272.1.mrna1;Target=FBgn0264272.1 1156 1308 +
Chr2	stalkie_big_nohaplotig	exon	26678086	26678188	100	-	.	Parent=FBgn0264272.1.mrna1;Target=FBgn0264272.1 1053 1155 +
Chr2	stalkie_big_nohaplotig	exon	26678251	26678577	100	-	.	Parent=FBgn0264272.1.mrna1;Target=FBgn0264272.1 726 1052 +
Chr2	stalkie_big_nohaplotig	exon	26678645	26678827	100	-	.	Parent=FBgn0264272.1.mrna1;Target=FBgn0264272.1 543 725 +
Chr2	stalkie_big_nohaplotig	exon	26681223	26681336	100	-	.	Parent=FBgn0264272.1.mrna1;Target=FBgn0264272.1 429 542 +
Chr2	stalkie_big_nohaplotig	exon	26697911	26698101	100	-	.	Parent=FBgn0264272.1.mrna1;Target=FBgn0264272.1 238 428 +
Chr2	stalkie_big_nohaplotig	exon	26701123	26701324	100	-	.	Parent=FBgn0264272.1.mrna1;Target=FBgn0264272.1 36 237 +
Chr2	stalkie_big_nohaplotig	exon	26706678	26706712	97	-	.	Parent=FBgn0264272.1.mrna1;Target=FBgn0264272.1 1 35 +
Chr2	stalkie_big_nohaplotig	CDS	26676378	26677661	.	-	0	Parent=FBgn0264272.1.mrna1;Target=FBgn0264272.1 1309 2592 +
Chr2	stalkie_big_nohaplotig	CDS	26677722	26677874	.	-	0	Parent=FBgn0264272.1.mrna1;Target=FBgn0264272.1 1156 1308 +
Chr2	stalkie_big_nohaplotig	CDS	26678086	26678188	.	-	1	Parent=FBgn0264272.1.mrna1;Target=FBgn0264272.1 1053 1155 +
Chr2	stalkie_big_nohaplotig	CDS	26678251	26678577	.	-	1	Parent=FBgn0264272.1.mrna1;Target=FBgn0264272.1 726 1052 +
Chr2	stalkie_big_nohaplotig	CDS	26678645	26678827	.	-	1	Parent=FBgn0264272.1.mrna1;Target=FBgn0264272.1 543 725 +
Chr2	stalkie_big_nohaplotig	CDS	26681223	26681336	.	-	1	Parent=FBgn0264272.1.mrna1;Target=FBgn0264272.1 429 542 +
Chr2	stalkie_big_nohaplotig	CDS	26697911	26698101	.	-	0	Parent=FBgn0264272.1.mrna1;Target=FBgn0264272.1 238 428 +
Chr2	stalkie_big_nohaplotig	CDS	26701123	26701324	.	-	1	Parent=FBgn0264272.1.mrna1;Target=FBgn0264272.1 36 237 +
Chr2	stalkie_big_nohaplotig	CDS	26706678	26706712	.	-	0	Parent=FBgn0264272.1.mrna1;Target=FBgn0264272.1 1 35 +
Chr2	gffcl	locus	26683525	26684677	.	-	.	ID=RLOC_00015783;geneIDs=FBgn0053514.3.path1;transcripts=FBgn0053514.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26683525	26684677	.	-	.	ID=FBgn0053514.3.mrna1;geneID=FBgn0053514.3.path1;Name=FBgn0053514.3;Dir=sensecoverage=100.0;identity=99.8;matches=979;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015783
Chr2	stalkie_big_nohaplotig	exon	26683525	26683779	100	-	.	Parent=FBgn0053514.3.mrna1;Target=FBgn0053514.3 727 981 +
Chr2	stalkie_big_nohaplotig	exon	26683880	26684252	100	-	.	Parent=FBgn0053514.3.mrna1;Target=FBgn0053514.3 354 726 +
Chr2	stalkie_big_nohaplotig	exon	26684325	26684677	99	-	.	Parent=FBgn0053514.3.mrna1;Target=FBgn0053514.3 1 353 +
Chr2	stalkie_big_nohaplotig	CDS	26683525	26683779	.	-	0	Parent=FBgn0053514.3.mrna1;Target=FBgn0053514.3 727 981 +
Chr2	stalkie_big_nohaplotig	CDS	26683880	26684252	.	-	1	Parent=FBgn0053514.3.mrna1;Target=FBgn0053514.3 354 726 +
Chr2	stalkie_big_nohaplotig	CDS	26684325	26684677	.	-	0	Parent=FBgn0053514.3.mrna1;Target=FBgn0053514.3 1 353 +
Chr2	gffcl	locus	26693850	26694593	.	-	.	ID=RLOC_00015784;geneIDs=comp71002_c0_seq1.path1;transcripts=comp71002_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26693850	26694593	.	-	.	ID=comp71002_c0_seq1.mrna1;geneID=comp71002_c0_seq1.path1;Name=comp71002_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=744;mismatches=0;indels=0;unknowns=0;Target=comp71002_c0_seq1 744 1 .;CDS_Target=comp71002_c0_seq1 277 101 .;locus=RLOC_00015784
Chr2	stalkie_big_nohaplotig	exon	26693850	26694593	100	-	.	Parent=comp71002_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26694317	26694493	.	-	0	Parent=comp71002_c0_seq1.mrna1
Chr2	gffcl	locus	26711382	26711680	.	-	.	ID=RLOC_00015785;geneIDs=comp3143132_c0_seq1.path1;transcripts=comp3143132_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26711382	26711680	.	-	.	ID=comp3143132_c0_seq1.mrna1;geneID=comp3143132_c0_seq1.path1;Name=comp3143132_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.7;matches=298;mismatches=1;indels=0;unknowns=0;Target=comp3143132_c0_seq1 301 3 .;CDS_Target=comp3143132_c0_seq1 188 3 .;locus=RLOC_00015785
Chr2	stalkie_big_nohaplotig	exon	26711382	26711680	99	-	.	Parent=comp3143132_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26711495	26711680	.	-	0	Parent=comp3143132_c0_seq1.mrna1
Chr2	gffcl	locus	26711751	26712182	.	-	.	ID=RLOC_00015786;geneIDs=FBgn0004427.1.path1;transcripts=FBgn0004427.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26711751	26712182	.	-	.	ID=FBgn0004427.1.mrna1;geneID=FBgn0004427.1.path1;Name=FBgn0004427.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=432;mismatches=0;indels=0;unknowns=0;Target=FBgn0004427.1 432 1 .;locus=RLOC_00015786
Chr2	stalkie_big_nohaplotig	exon	26711751	26712182	100	-	.	Parent=FBgn0004427.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26711751	26712182	.	-	0	Parent=FBgn0004427.1.mrna1
Chr2	gffcl	locus	26724833	26725132	.	-	.	ID=RLOC_00015787;geneIDs=FBgn0004431.1.path1;transcripts=FBgn0004431.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26724833	26725132	.	-	.	ID=FBgn0004431.1.mrna1;geneID=FBgn0004431.1.path1;Name=FBgn0004431.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=300;mismatches=0;indels=0;unknowns=0;Target=FBgn0004431.1 300 1 .;locus=RLOC_00015787
Chr2	stalkie_big_nohaplotig	exon	26724833	26725132	100	-	.	Parent=FBgn0004431.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26724833	26725132	.	-	0	Parent=FBgn0004431.1.mrna1
Chr2	gffcl	locus	26725959	26726799	.	+	.	ID=RLOC_00015788;geneIDs=FBgn0004429.3.path1,comp59030_c0_seq1.path1;transcripts=FBgn0004429.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26725959	26726444	.	+	.	ID=FBgn0004429.3.mrna1;geneID=FBgn0004429.3.path1;Name=FBgn0004429.3;Dir=indeterminatecoverage=100.0;identity=99.2;matches=482;mismatches=4;indels=0;unknowns=0;Target=FBgn0004429.3 486 1 .;locus=RLOC_00015788
Chr2	stalkie_big_nohaplotig	exon	26725959	26726444	99	+	.	Parent=FBgn0004429.3.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26725959	26726444	.	+	0	Parent=FBgn0004429.3.mrna1
Chr2	gffcl	locus	26728660	26729087	.	+	.	ID=RLOC_00015789;geneIDs=FBgn0004429.2.path1;transcripts=FBgn0004429.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26728660	26729087	.	+	.	ID=FBgn0004429.2.mrna1;geneID=FBgn0004429.2.path1;Name=FBgn0004429.2;Dir=indeterminatecoverage=99.8;identity=99.1;matches=424;mismatches=4;indels=0;unknowns=0;Target=FBgn0004429.2 428 1 .;CDS_Target=FBgn0004429.2 426 1 .;locus=RLOC_00015789
Chr2	stalkie_big_nohaplotig	exon	26728660	26729087	99	+	.	Parent=FBgn0004429.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26728660	26729085	.	+	0	Parent=FBgn0004429.2.mrna1
Chr2	gffcl	locus	26777902	26780333	.	+	.	ID=RLOC_00015790;geneIDs=ORF295.path1;transcripts=ORF295.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26777902	26780333	.	+	.	ID=ORF295.mrna1;geneID=ORF295.path1;Name=ORF295;Dir=sensecoverage=100.0;identity=99.1;matches=2098;mismatches=13;indels=7;unknowns=0;locus=RLOC_00015790
Chr2	stalkie_big_nohaplotig	exon	26777902	26778136	98	+	.	Parent=ORF295.mrna1;Target=ORF295 1 235 +
Chr2	stalkie_big_nohaplotig	exon	26778219	26778380	100	+	.	Parent=ORF295.mrna1;Target=ORF295 236 397 +
Chr2	stalkie_big_nohaplotig	exon	26778498	26778947	99	+	.	Parent=ORF295.mrna1;Target=ORF295 398 847 +
Chr2	stalkie_big_nohaplotig	exon	26779008	26779325	99	+	.	Parent=ORF295.mrna1;Target=ORF295 848 1165 +
Chr2	stalkie_big_nohaplotig	exon	26779388	26780333	98	+	.	Parent=ORF295.mrna1;Target=ORF295 1166 2118 +
Chr2	stalkie_big_nohaplotig	CDS	26777902	26778136	.	+	0	Parent=ORF295.mrna1;Target=ORF295 1 235 +
Chr2	stalkie_big_nohaplotig	CDS	26778219	26778380	.	+	2	Parent=ORF295.mrna1;Target=ORF295 236 397 +
Chr2	stalkie_big_nohaplotig	CDS	26778498	26778947	.	+	2	Parent=ORF295.mrna1;Target=ORF295 398 847 +
Chr2	stalkie_big_nohaplotig	CDS	26779008	26779325	.	+	2	Parent=ORF295.mrna1;Target=ORF295 848 1165 +
Chr2	stalkie_big_nohaplotig	CDS	26779388	26780333	.	+	2	Parent=ORF295.mrna1;Target=ORF295 1166 2118 +
Chr2	gffcl	locus	26782662	26783441	.	+	.	ID=RLOC_00015791;geneIDs=ORF3001.path1;transcripts=ORF3001.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26782662	26783441	.	+	.	ID=ORF3001.mrna1;geneID=ORF3001.path1;Name=ORF3001;Dir=indeterminatecoverage=100.0;identity=99.7;matches=778;mismatches=2;indels=0;unknowns=0;Target=ORF3001 780 1 .;locus=RLOC_00015791
Chr2	stalkie_big_nohaplotig	exon	26782662	26783441	99	+	.	Parent=ORF3001.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26782662	26783441	.	+	0	Parent=ORF3001.mrna1
Chr2	gffcl	locus	26816370	26834325	.	-	.	ID=RLOC_00015792;geneIDs=FBgn0031170.9.path1;transcripts=FBgn0031170.9.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26816370	26834325	.	-	.	ID=FBgn0031170.9.mrna1;geneID=FBgn0031170.9.path1;Name=FBgn0031170.9;Dir=sensecoverage=99.7;identity=99.8;matches=4844;mismatches=12;indels=0;unknowns=0;locus=RLOC_00015792
Chr2	stalkie_big_nohaplotig	exon	26816370	26816524	99	-	.	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 4713 4867 +
Chr2	stalkie_big_nohaplotig	exon	26816601	26816693	100	-	.	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 4620 4712 +
Chr2	stalkie_big_nohaplotig	exon	26817129	26817761	100	-	.	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 3987 4619 +
Chr2	stalkie_big_nohaplotig	exon	26817831	26818004	100	-	.	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 3813 3986 +
Chr2	stalkie_big_nohaplotig	exon	26818064	26818208	100	-	.	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 3668 3812 +
Chr2	stalkie_big_nohaplotig	exon	26818272	26818445	100	-	.	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 3494 3667 +
Chr2	stalkie_big_nohaplotig	exon	26819688	26819810	100	-	.	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 3371 3493 +
Chr2	stalkie_big_nohaplotig	exon	26819875	26820218	97	-	.	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 3027 3370 +
Chr2	stalkie_big_nohaplotig	exon	26820279	26820801	100	-	.	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 2504 3026 +
Chr2	stalkie_big_nohaplotig	exon	26821552	26821861	100	-	.	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 2194 2503 +
Chr2	stalkie_big_nohaplotig	exon	26822551	26823780	99	-	.	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 964 2193 +
Chr2	stalkie_big_nohaplotig	exon	26824856	26824999	100	-	.	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 820 963 +
Chr2	stalkie_big_nohaplotig	exon	26825059	26825647	99	-	.	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 231 819 +
Chr2	stalkie_big_nohaplotig	exon	26834107	26834325	100	-	.	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 12 230 +
Chr2	stalkie_big_nohaplotig	CDS	26816371	26816524	.	-	1	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 4713 4866 +
Chr2	stalkie_big_nohaplotig	CDS	26816601	26816693	.	-	1	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 4620 4712 +
Chr2	stalkie_big_nohaplotig	CDS	26817129	26817761	.	-	1	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 3987 4619 +
Chr2	stalkie_big_nohaplotig	CDS	26817831	26818004	.	-	1	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 3813 3986 +
Chr2	stalkie_big_nohaplotig	CDS	26818064	26818208	.	-	2	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 3668 3812 +
Chr2	stalkie_big_nohaplotig	CDS	26818272	26818445	.	-	2	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 3494 3667 +
Chr2	stalkie_big_nohaplotig	CDS	26819688	26819810	.	-	2	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 3371 3493 +
Chr2	stalkie_big_nohaplotig	CDS	26819875	26820218	.	-	1	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 3027 3370 +
Chr2	stalkie_big_nohaplotig	CDS	26820279	26820801	.	-	2	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 2504 3026 +
Chr2	stalkie_big_nohaplotig	CDS	26821552	26821861	.	-	0	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 2194 2503 +
Chr2	stalkie_big_nohaplotig	CDS	26822551	26823780	.	-	0	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 964 2193 +
Chr2	stalkie_big_nohaplotig	CDS	26824856	26824999	.	-	0	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 820 963 +
Chr2	stalkie_big_nohaplotig	CDS	26825059	26825647	.	-	1	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 231 819 +
Chr2	stalkie_big_nohaplotig	CDS	26834107	26834324	.	-	0	Parent=FBgn0031170.9.mrna1;Target=FBgn0031170.9 13 230 +
Chr2	gffcl	locus	26903821	26905416	.	-	.	ID=RLOC_00015793;geneIDs=comp158443_c0_seq1.path1;transcripts=comp158443_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26903821	26905416	.	-	.	ID=comp158443_c0_seq1.mrna1;geneID=comp158443_c0_seq1.path1;Name=comp158443_c0_seq1;Dir=antisensecoverage=98.5;identity=99.8;matches=1398;mismatches=2;indels=1;unknowns=0;Target=comp158443_c0_seq1 906 1415 .;locus=RLOC_00015793
Chr2	stalkie_big_nohaplotig	exon	26903821	26904029	100	-	.	Parent=comp158443_c0_seq1.mrna1;Target=comp158443_c0_seq1 16 224 -
Chr2	stalkie_big_nohaplotig	exon	26904226	26905416	99	-	.	Parent=comp158443_c0_seq1.mrna1;Target=comp158443_c0_seq1 225 1416 -
Chr2	stalkie_big_nohaplotig	CDS	26904907	26905415	.	-	0	Parent=comp158443_c0_seq1.mrna1
Chr2	gffcl	locus	26905830	26907232	.	-	.	ID=RLOC_00015794;geneIDs=comp155203_c0_seq1.path1;transcripts=comp155203_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26905830	26907232	.	-	.	ID=comp155203_c0_seq1.mrna1;geneID=comp155203_c0_seq1.path1;Name=comp155203_c0_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=1327;mismatches=9;indels=0;unknowns=0;Target=comp155203_c0_seq1 1095 1223 .;locus=RLOC_00015794
Chr2	stalkie_big_nohaplotig	exon	26905830	26906850	99	-	.	Parent=comp155203_c0_seq1.mrna1;Target=comp155203_c0_seq1 1 1021 -
Chr2	stalkie_big_nohaplotig	exon	26906918	26907232	99	-	.	Parent=comp155203_c0_seq1.mrna1;Target=comp155203_c0_seq1 1022 1336 -
Chr2	stalkie_big_nohaplotig	CDS	26906991	26907119	.	-	0	Parent=comp155203_c0_seq1.mrna1
Chr2	gffcl	locus	26907280	26908217	.	+	.	ID=RLOC_00015795;geneIDs=comp150846_c0_seq1.path1;transcripts=comp150846_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26907280	26908217	.	+	.	ID=comp150846_c0_seq1.mrna1;geneID=comp150846_c0_seq1.path1;Name=comp150846_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.7;matches=916;mismatches=18;indels=4;unknowns=0;Target=comp150846_c0_seq1 934 1 .;CDS_Target=comp150846_c0_seq1 206 51 .;locus=RLOC_00015795
Chr2	stalkie_big_nohaplotig	exon	26907280	26908217	97	+	.	Parent=comp150846_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26907330	26907489	.	+	0	Parent=comp150846_c0_seq1.mrna1
Chr2	gffcl	locus	26937467	28636941	.	-	.	ID=RLOC_00015796;geneIDs=comp144878_c0_seq1.path1,comp153046_c0_seq1.path1;transcripts=comp153046_c0_seq1.mrna1,comp144878_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26937467	28636941	.	-	.	ID=comp153046_c0_seq1.mrna1;geneID=comp153046_c0_seq1.path1;Name=comp153046_c0_seq1;Dir=indeterminatecoverage=75.6;identity=93.1;matches=349;mismatches=11;indels=15;unknowns=0;locus=RLOC_00015796
Chr2	stalkie_big_nohaplotig	exon	26937467	26937495	63	-	.	Parent=comp153046_c0_seq1.mrna1;Target=comp153046_c0_seq1 375 338 .
Chr2	stalkie_big_nohaplotig	exon	26968373	26968380	100	-	.	Parent=comp153046_c0_seq1.mrna1;Target=comp153046_c0_seq1 337 330 .
Chr2	stalkie_big_nohaplotig	exon	26973684	26973688	100	-	.	Parent=comp153046_c0_seq1.mrna1;Target=comp153046_c0_seq1 329 325 .
Chr2	stalkie_big_nohaplotig	exon	26978187	26978195	100	-	.	Parent=comp153046_c0_seq1.mrna1;Target=comp153046_c0_seq1 324 316 .
Chr2	stalkie_big_nohaplotig	exon	26983305	26983312	100	-	.	Parent=comp153046_c0_seq1.mrna1;Target=comp153046_c0_seq1 315 308 .
Chr2	stalkie_big_nohaplotig	exon	26983398	26983402	100	-	.	Parent=comp153046_c0_seq1.mrna1;Target=comp153046_c0_seq1 307 303 .
Chr2	stalkie_big_nohaplotig	exon	26986570	26986572	100	-	.	Parent=comp153046_c0_seq1.mrna1;Target=comp153046_c0_seq1 302 300 .
Chr2	stalkie_big_nohaplotig	exon	26989417	26989421	100	-	.	Parent=comp153046_c0_seq1.mrna1;Target=comp153046_c0_seq1 299 295 .
Chr2	stalkie_big_nohaplotig	exon	26996598	26996601	100	-	.	Parent=comp153046_c0_seq1.mrna1;Target=comp153046_c0_seq1 294 291 .
Chr2	stalkie_big_nohaplotig	exon	27000835	27000841	100	-	.	Parent=comp153046_c0_seq1.mrna1;Target=comp153046_c0_seq1 290 284 .
Chr2	stalkie_big_nohaplotig	exon	28636665	28636941	95	-	.	Parent=comp153046_c0_seq1.mrna1;Target=comp153046_c0_seq1 283 1 .
Chr2	stalkie_big_nohaplotig	CDS	26983310	26983312	.	-	0	Parent=comp153046_c0_seq1.mrna1;Target=comp153046_c0_seq1 310 308 .
Chr2	stalkie_big_nohaplotig	CDS	26983398	26983402	.	-	2	Parent=comp153046_c0_seq1.mrna1;Target=comp153046_c0_seq1 307 303 .
Chr2	stalkie_big_nohaplotig	CDS	26986570	26986572	.	-	2	Parent=comp153046_c0_seq1.mrna1;Target=comp153046_c0_seq1 302 300 .
Chr2	stalkie_big_nohaplotig	CDS	26989417	26989421	.	-	1	Parent=comp153046_c0_seq1.mrna1;Target=comp153046_c0_seq1 299 295 .
Chr2	stalkie_big_nohaplotig	CDS	26996598	26996601	.	-	2	Parent=comp153046_c0_seq1.mrna1;Target=comp153046_c0_seq1 294 291 .
Chr2	stalkie_big_nohaplotig	CDS	27000835	27000841	.	-	0	Parent=comp153046_c0_seq1.mrna1;Target=comp153046_c0_seq1 290 284 .
Chr2	stalkie_big_nohaplotig	CDS	28636665	28636700	.	-	0	Parent=comp153046_c0_seq1.mrna1;Target=comp153046_c0_seq1 283 248 .
Chr2	stalkie_big_nohaplotig	mRNA	26983222	26983710	.	-	.	ID=comp144878_c0_seq1.mrna1;geneID=comp144878_c0_seq1.path1;Name=comp144878_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.0;matches=476;mismatches=13;indels=7;unknowns=0;Target=comp144878_c0_seq1 496 1 .;CDS_Target=comp144878_c0_seq1 151 2 .;locus=RLOC_00015796
Chr2	stalkie_big_nohaplotig	exon	26983222	26983710	95	-	.	Parent=comp144878_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26983560	26983709	.	-	0	Parent=comp144878_c0_seq1.mrna1
Chr2	gffcl	locus	26955260	26956034	.	+	.	ID=RLOC_00015797;geneIDs=FBgn0046879.1.path1;transcripts=FBgn0046879.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26955260	26956034	.	+	.	ID=FBgn0046879.1.mrna1;geneID=FBgn0046879.1.path1;Name=FBgn0046879.1;Dir=sensecoverage=100.0;identity=100.0;matches=720;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015797
Chr2	stalkie_big_nohaplotig	exon	26955260	26955370	100	+	.	Parent=FBgn0046879.1.mrna1;Target=FBgn0046879.1 1 111 +
Chr2	stalkie_big_nohaplotig	exon	26955426	26956034	100	+	.	Parent=FBgn0046879.1.mrna1;Target=FBgn0046879.1 112 720 +
Chr2	stalkie_big_nohaplotig	CDS	26955260	26955370	.	+	0	Parent=FBgn0046879.1.mrna1;Target=FBgn0046879.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	26955426	26956034	.	+	0	Parent=FBgn0046879.1.mrna1;Target=FBgn0046879.1 112 720 +
Chr2	gffcl	locus	26956895	26957610	.	+	.	ID=RLOC_00015798;geneIDs=comp156574_c0_seq1.path1;transcripts=comp156574_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26956895	26957610	.	+	.	ID=comp156574_c0_seq1.mrna1;geneID=comp156574_c0_seq1.path1;Name=comp156574_c0_seq1;Dir=antisensecoverage=98.5;identity=98.0;matches=644;mismatches=13;indels=0;unknowns=0;locus=RLOC_00015798
Chr2	stalkie_big_nohaplotig	exon	26956895	26956983	98	+	.	Parent=comp156574_c0_seq1.mrna1;Target=comp156574_c0_seq1 579 667 -
Chr2	stalkie_big_nohaplotig	exon	26957043	26957610	97	+	.	Parent=comp156574_c0_seq1.mrna1;Target=comp156574_c0_seq1 11 578 -
Chr2	stalkie_big_nohaplotig	CDS	26956942	26956983	.	+	0	Parent=comp156574_c0_seq1.mrna1;Target=comp156574_c0_seq1 579 620 .
Chr2	stalkie_big_nohaplotig	CDS	26957043	26957441	.	+	0	Parent=comp156574_c0_seq1.mrna1;Target=comp156574_c0_seq1 180 578 .
Chr2	gffcl	locus	26958266	26958918	.	-	.	ID=RLOC_00015799;geneIDs=comp143303_c0_seq1.path1;transcripts=comp143303_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26958266	26958918	.	-	.	ID=comp143303_c0_seq1.mrna1;geneID=comp143303_c0_seq1.path1;Name=comp143303_c0_seq1;Dir=sensecoverage=99.8;identity=100.0;matches=553;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015799
Chr2	stalkie_big_nohaplotig	exon	26958266	26958701	100	-	.	Parent=comp143303_c0_seq1.mrna1;Target=comp143303_c0_seq1 118 553 +
Chr2	stalkie_big_nohaplotig	exon	26958802	26958918	100	-	.	Parent=comp143303_c0_seq1.mrna1;Target=comp143303_c0_seq1 1 117 +
Chr2	stalkie_big_nohaplotig	CDS	26958318	26958701	.	-	0	Parent=comp143303_c0_seq1.mrna1;Target=comp143303_c0_seq1 118 501 +
Chr2	stalkie_big_nohaplotig	CDS	26958802	26958918	.	-	0	Parent=comp143303_c0_seq1.mrna1;Target=comp143303_c0_seq1 1 117 +
Chr2	gffcl	locus	26959234	26959807	.	+	.	ID=RLOC_00015800;geneIDs=comp147499_c0_seq1.path1;transcripts=comp147499_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26959234	26959807	.	+	.	ID=comp147499_c0_seq1.mrna1;geneID=comp147499_c0_seq1.path1;Name=comp147499_c0_seq1;Dir=antisensecoverage=99.0;identity=100.0;matches=501;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015800
Chr2	stalkie_big_nohaplotig	exon	26959234	26959321	100	+	.	Parent=comp147499_c0_seq1.mrna1;Target=comp147499_c0_seq1 419 506 -
Chr2	stalkie_big_nohaplotig	exon	26959395	26959807	100	+	.	Parent=comp147499_c0_seq1.mrna1;Target=comp147499_c0_seq1 6 418 -
Chr2	stalkie_big_nohaplotig	CDS	26959235	26959321	.	+	0	Parent=comp147499_c0_seq1.mrna1;Target=comp147499_c0_seq1 419 505 .
Chr2	stalkie_big_nohaplotig	CDS	26959395	26959748	.	+	0	Parent=comp147499_c0_seq1.mrna1;Target=comp147499_c0_seq1 65 418 .
Chr2	gffcl	locus	26966862	26967682	.	-	.	ID=RLOC_00015801;geneIDs=comp156008_c0_seq1.path1;transcripts=comp156008_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26966862	26967682	.	-	.	ID=comp156008_c0_seq1.mrna1;geneID=comp156008_c0_seq1.path1;Name=comp156008_c0_seq1;Dir=antisensecoverage=93.3;identity=99.7;matches=683;mismatches=0;indels=2;unknowns=0;locus=RLOC_00015801
Chr2	stalkie_big_nohaplotig	exon	26966862	26967433	99	-	.	Parent=comp156008_c0_seq1.mrna1;Target=comp156008_c0_seq1 24 597 -
Chr2	stalkie_big_nohaplotig	exon	26967572	26967682	100	-	.	Parent=comp156008_c0_seq1.mrna1;Target=comp156008_c0_seq1 598 708 -
Chr2	stalkie_big_nohaplotig	CDS	26967363	26967433	.	-	0	Parent=comp156008_c0_seq1.mrna1;Target=comp156008_c0_seq1 526 597 .
Chr2	stalkie_big_nohaplotig	CDS	26967572	26967652	.	-	0	Parent=comp156008_c0_seq1.mrna1;Target=comp156008_c0_seq1 598 678 .
Chr2	gffcl	locus	26971850	26972415	.	+	.	ID=RLOC_00015802;geneIDs=FBgn0034468.1.path1;transcripts=FBgn0034468.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26971850	26972415	.	+	.	ID=FBgn0034468.1.mrna1;geneID=FBgn0034468.1.path1;Name=FBgn0034468.1;Dir=sensecoverage=100.0;identity=100.0;matches=498;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015802
Chr2	stalkie_big_nohaplotig	exon	26971850	26971987	100	+	.	Parent=FBgn0034468.1.mrna1;Target=FBgn0034468.1 1 138 +
Chr2	stalkie_big_nohaplotig	exon	26972056	26972415	100	+	.	Parent=FBgn0034468.1.mrna1;Target=FBgn0034468.1 139 498 +
Chr2	stalkie_big_nohaplotig	CDS	26971850	26971987	.	+	0	Parent=FBgn0034468.1.mrna1;Target=FBgn0034468.1 1 138 +
Chr2	stalkie_big_nohaplotig	CDS	26972056	26972415	.	+	0	Parent=FBgn0034468.1.mrna1;Target=FBgn0034468.1 139 498 +
Chr2	gffcl	locus	26973959	26974338	.	-	.	ID=RLOC_00015803;geneIDs=comp146400_c1_seq1.path1;transcripts=comp146400_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	26973959	26974338	.	-	.	ID=comp146400_c1_seq1.mrna1;geneID=comp146400_c1_seq1.path1;Name=comp146400_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=369;mismatches=11;indels=0;unknowns=0;Target=comp146400_c1_seq1 380 1 .;CDS_Target=comp146400_c1_seq1 380 204 .;locus=RLOC_00015803
Chr2	stalkie_big_nohaplotig	exon	26973959	26974338	97	-	.	Parent=comp146400_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	26973959	26974135	.	-	0	Parent=comp146400_c1_seq1.mrna1
Chr2	gffcl	locus	27024612	27024808	.	-	.	ID=RLOC_00015805;geneIDs=comp70540_c0_seq1.path1;transcripts=comp70540_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27024612	27024808	.	-	.	ID=comp70540_c0_seq1.mrna1;geneID=comp70540_c0_seq1.path1;Name=comp70540_c0_seq1;Dir=indeterminatecoverage=95.2;identity=94.4;matches=186;mismatches=11;indels=0;unknowns=0;Target=comp70540_c0_seq1 197 1 .;CDS_Target=comp70540_c0_seq1 127 2 .;locus=RLOC_00015805
Chr2	stalkie_big_nohaplotig	exon	27024612	27024808	94	-	.	Parent=comp70540_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	27024682	27024807	.	-	0	Parent=comp70540_c0_seq1.mrna1
Chr2	gffcl	locus	27024893	27025077	.	-	.	ID=RLOC_00015806;geneIDs=comp441051_c0_seq1.path1;transcripts=comp441051_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27024893	27025077	.	-	.	ID=comp441051_c0_seq1.mrna1;geneID=comp441051_c0_seq1.path1;Name=comp441051_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=177;mismatches=0;indels=0;unknowns=0;Target=comp441051_c0_seq1 53 3 .;locus=RLOC_00015806
Chr2	stalkie_big_nohaplotig	exon	27024893	27025016	100	-	.	Parent=comp441051_c0_seq1.mrna1;Target=comp441051_c0_seq1 231 108 .
Chr2	stalkie_big_nohaplotig	exon	27025025	27025077	100	-	.	Parent=comp441051_c0_seq1.mrna1;Target=comp441051_c0_seq1 53 1 .
Chr2	stalkie_big_nohaplotig	CDS	27025025	27025075	.	-	0	Parent=comp441051_c0_seq1.mrna1
Chr2	gffcl	locus	27026901	27027495	.	+	.	ID=RLOC_00015807;geneIDs=comp155171_c0_seq1.path1;transcripts=comp155171_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27026901	27027495	.	+	.	ID=comp155171_c0_seq1.mrna1;geneID=comp155171_c0_seq1.path1;Name=comp155171_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.7;matches=589;mismatches=6;indels=2;unknowns=0;Target=comp155171_c0_seq1 597 1 .;CDS_Target=comp155171_c0_seq1 441 190 .;locus=RLOC_00015807
Chr2	stalkie_big_nohaplotig	exon	27026901	27027495	98	+	.	Parent=comp155171_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	27027090	27027339	.	+	0	Parent=comp155171_c0_seq1.mrna1
Chr2	gffcl	locus	27029564	27030248	.	+	.	ID=RLOC_00015808;geneIDs=comp150576_c0_seq1.path1;transcripts=comp150576_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27029564	27030248	.	+	.	ID=comp150576_c0_seq1.mrna1;geneID=comp150576_c0_seq1.path1;Name=comp150576_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=675;mismatches=10;indels=0;unknowns=0;Target=comp150576_c0_seq1 685 1 .;CDS_Target=comp150576_c0_seq1 517 182 .;locus=RLOC_00015808
Chr2	stalkie_big_nohaplotig	exon	27029564	27030248	98	+	.	Parent=comp150576_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	27029745	27030080	.	+	0	Parent=comp150576_c0_seq1.mrna1
Chr2	gffcl	locus	27038308	27038743	.	+	.	ID=RLOC_00015809;geneIDs=comp57258_c0_seq1.path1;transcripts=comp57258_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27038308	27038743	.	+	.	ID=comp57258_c0_seq1.mrna1;geneID=comp57258_c0_seq1.path1;Name=comp57258_c0_seq1;Dir=indeterminatecoverage=91.6;identity=100.0;matches=436;mismatches=0;indels=0;unknowns=0;Target=comp57258_c0_seq1 476 41 .;CDS_Target=comp57258_c0_seq1 324 130 .;locus=RLOC_00015809
Chr2	stalkie_big_nohaplotig	exon	27038308	27038743	100	+	.	Parent=comp57258_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	27038397	27038591	.	+	0	Parent=comp57258_c0_seq1.mrna1
Chr2	gffcl	locus	27040683	27041311	.	-	.	ID=RLOC_00015810;geneIDs=comp143295_c0_seq1.path1;transcripts=comp143295_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27040683	27041311	.	-	.	ID=comp143295_c0_seq1.mrna1;geneID=comp143295_c0_seq1.path1;Name=comp143295_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=627;mismatches=2;indels=0;unknowns=0;Target=comp143295_c0_seq1 629 1 .;CDS_Target=comp143295_c0_seq1 512 273 .;locus=RLOC_00015810
Chr2	stalkie_big_nohaplotig	exon	27040683	27041311	99	-	.	Parent=comp143295_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	27040800	27041039	.	-	0	Parent=comp143295_c0_seq1.mrna1
Chr2	gffcl	locus	27042000	27042511	.	-	.	ID=RLOC_00015811;geneIDs=comp145451_c0_seq1.path1;transcripts=comp145451_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27042000	27042511	.	-	.	ID=comp145451_c0_seq1.mrna1;geneID=comp145451_c0_seq1.path1;Name=comp145451_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.8;matches=508;mismatches=4;indels=2;unknowns=0;Target=comp145451_c0_seq1 514 1 .;CDS_Target=comp145451_c0_seq1 384 211 .;locus=RLOC_00015811
Chr2	stalkie_big_nohaplotig	exon	27042000	27042511	98	-	.	Parent=comp145451_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	27042128	27042301	.	-	0	Parent=comp145451_c0_seq1.mrna1
Chr2	gffcl	locus	27042884	27043375	.	+	.	ID=RLOC_00015812;geneIDs=comp144785_c0_seq1.path1;transcripts=comp144785_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27042884	27043375	.	+	.	ID=comp144785_c0_seq1.mrna1;geneID=comp144785_c0_seq1.path1;Name=comp144785_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=490;mismatches=2;indels=0;unknowns=0;Target=comp144785_c0_seq1 492 1 .;CDS_Target=comp144785_c0_seq1 282 142 .;locus=RLOC_00015812
Chr2	stalkie_big_nohaplotig	exon	27042884	27043375	99	+	.	Parent=comp144785_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	27043025	27043165	.	+	0	Parent=comp144785_c0_seq1.mrna1
Chr2	gffcl	locus	27044927	27045503	.	.	.	ID=RLOC_00015813;geneIDs=comp67815_c0_seq1.path1,comp115682_c0_seq1.path1;transcripts=comp115682_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27045152	27045503	.	-	.	ID=comp115682_c0_seq1.mrna1;geneID=comp115682_c0_seq1.path1;Name=comp115682_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=348;mismatches=4;indels=0;unknowns=0;Target=comp115682_c0_seq1 352 1 .;CDS_Target=comp115682_c0_seq1 351 130 .;locus=RLOC_00015813
Chr2	stalkie_big_nohaplotig	exon	27045152	27045503	98	-	.	Parent=comp115682_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	27045153	27045374	.	-	0	Parent=comp115682_c0_seq1.mrna1
Chr2	gffcl	locus	27047539	27049252	.	+	.	ID=RLOC_00015814;geneIDs=FBgn0000592.1.path1;transcripts=FBgn0000592.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27047539	27049252	.	+	.	ID=FBgn0000592.1.mrna1;geneID=FBgn0000592.1.path1;Name=FBgn0000592.1;Dir=sensecoverage=100.0;identity=99.9;matches=1589;mismatches=0;indels=1;unknowns=0;Target=FBgn0000592.1 3 23 +;locus=RLOC_00015814
Chr2	stalkie_big_nohaplotig	exon	27047539	27048903	99	+	.	Parent=FBgn0000592.1.mrna1;Target=FBgn0000592.1 1 1366 +
Chr2	stalkie_big_nohaplotig	exon	27048971	27049100	100	+	.	Parent=FBgn0000592.1.mrna1;Target=FBgn0000592.1 1367 1496 +
Chr2	stalkie_big_nohaplotig	exon	27049159	27049252	100	+	.	Parent=FBgn0000592.1.mrna1;Target=FBgn0000592.1 1497 1590 +
Chr2	stalkie_big_nohaplotig	CDS	27047541	27047560	.	+	0	Parent=FBgn0000592.1.mrna1
Chr2	gffcl	locus	27096464	27097220	.	-	.	ID=RLOC_00015815;geneIDs=comp154541_c0_seq1.path1;transcripts=comp154541_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27096464	27097220	.	-	.	ID=comp154541_c0_seq1.mrna1;geneID=comp154541_c0_seq1.path1;Name=comp154541_c0_seq1;Dir=sensecoverage=99.7;identity=94.2;matches=666;mismatches=14;indels=27;unknowns=0;Target=comp154541_c0_seq1 259 642 +;locus=RLOC_00015815
Chr2	stalkie_big_nohaplotig	exon	27096464	27096970	92	-	.	Parent=comp154541_c0_seq1.mrna1;Target=comp154541_c0_seq1 174 707 +
Chr2	stalkie_big_nohaplotig	exon	27097048	27097220	98	-	.	Parent=comp154541_c0_seq1.mrna1;Target=comp154541_c0_seq1 1 173 +
Chr2	stalkie_big_nohaplotig	CDS	27096529	27096912	.	-	0	Parent=comp154541_c0_seq1.mrna1
Chr2	gffcl	locus	27163424	27165719	.	-	.	ID=RLOC_00015816;geneIDs=comp157957_c0_seq1.path1;transcripts=comp157957_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27163424	27165719	.	-	.	ID=comp157957_c0_seq1.mrna1;geneID=comp157957_c0_seq1.path1;Name=comp157957_c0_seq1;Dir=sensecoverage=97.4;identity=95.4;matches=1095;mismatches=47;indels=6;unknowns=0;Target=comp157957_c0_seq1 705 1190 +;locus=RLOC_00015816
Chr2	stalkie_big_nohaplotig	exon	27163424	27163955	99	-	.	Parent=comp157957_c0_seq1.mrna1;Target=comp157957_c0_seq1 703 1234 +
Chr2	stalkie_big_nohaplotig	exon	27164863	27164949	88	-	.	Parent=comp157957_c0_seq1.mrna1;Target=comp157957_c0_seq1 616 702 +
Chr2	stalkie_big_nohaplotig	exon	27165028	27165040	100	-	.	Parent=comp157957_c0_seq1.mrna1;Target=comp157957_c0_seq1 585 597 +
Chr2	stalkie_big_nohaplotig	exon	27165080	27165110	87	-	.	Parent=comp157957_c0_seq1.mrna1;Target=comp157957_c0_seq1 538 568 +
Chr2	stalkie_big_nohaplotig	exon	27165116	27165342	88	-	.	Parent=comp157957_c0_seq1.mrna1;Target=comp157957_c0_seq1 291 512 +
Chr2	stalkie_big_nohaplotig	exon	27165406	27165465	100	-	.	Parent=comp157957_c0_seq1.mrna1;Target=comp157957_c0_seq1 231 290 +
Chr2	stalkie_big_nohaplotig	exon	27165523	27165719	94	-	.	Parent=comp157957_c0_seq1.mrna1;Target=comp157957_c0_seq1 33 230 +
Chr2	stalkie_big_nohaplotig	CDS	27163468	27163953	.	-	0	Parent=comp157957_c0_seq1.mrna1
Chr2	gffcl	locus	27183372	27184076	.	+	.	ID=RLOC_00015817;geneIDs=comp156591_c0_seq1.path8;transcripts=comp156591_c0_seq1.mrna8
Chr2	stalkie_big_nohaplotig	mRNA	27183372	27184076	.	+	.	ID=comp156591_c0_seq1.mrna8;geneID=comp156591_c0_seq1.path8;Name=comp156591_c0_seq1;Dir=indeterminatecoverage=89.4;identity=96.8;matches=685;mismatches=9;indels=14;unknowns=0;Target=comp156591_c0_seq1 780 84 .;CDS_Target=comp156591_c0_seq1 105 85 .;locus=RLOC_00015817
Chr2	stalkie_big_nohaplotig	exon	27183372	27184076	96	+	.	Parent=comp156591_c0_seq1.mrna8
Chr2	stalkie_big_nohaplotig	CDS	27183373	27183392	.	+	0	Parent=comp156591_c0_seq1.mrna8
Chr2	gffcl	locus	27186670	27186952	.	+	.	ID=RLOC_00015818;geneIDs=comp175801_c0_seq1.path1;transcripts=comp175801_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27186670	27186952	.	+	.	ID=comp175801_c0_seq1.mrna1;geneID=comp175801_c0_seq1.path1;Name=comp175801_c0_seq1;Dir=indeterminatecoverage=94.8;identity=92.2;matches=261;mismatches=11;indels=11;unknowns=0;Target=comp175801_c0_seq1 273 2 .;CDS_Target=comp175801_c0_seq1 272 201 .;locus=RLOC_00015818
Chr2	stalkie_big_nohaplotig	exon	27186670	27186952	92	+	.	Parent=comp175801_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	27186880	27186951	.	+	0	Parent=comp175801_c0_seq1.mrna1
Chr2	gffcl	locus	27216276	27217138	.	-	.	ID=RLOC_00015819;geneIDs=FBgn0005655.2.path1;transcripts=FBgn0005655.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27216276	27217138	.	-	.	ID=FBgn0005655.2.mrna1;geneID=FBgn0005655.2.path1;Name=FBgn0005655.2;Dir=sensecoverage=100.0;identity=99.0;matches=778;mismatches=8;indels=0;unknowns=0;locus=RLOC_00015819
Chr2	stalkie_big_nohaplotig	exon	27216276	27216947	98	-	.	Parent=FBgn0005655.2.mrna1;Target=FBgn0005655.2 115 786 +
Chr2	stalkie_big_nohaplotig	exon	27217025	27217138	100	-	.	Parent=FBgn0005655.2.mrna1;Target=FBgn0005655.2 1 114 +
Chr2	stalkie_big_nohaplotig	CDS	27216276	27216947	.	-	0	Parent=FBgn0005655.2.mrna1;Target=FBgn0005655.2 115 786 +
Chr2	stalkie_big_nohaplotig	CDS	27217025	27217138	.	-	0	Parent=FBgn0005655.2.mrna1;Target=FBgn0005655.2 1 114 +
Chr2	gffcl	locus	27242399	27278525	.	+	.	ID=RLOC_00015820;geneIDs=comp157741_c0_seq1.path1;transcripts=comp157741_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27242399	27278525	.	+	.	ID=comp157741_c0_seq1.mrna1;geneID=comp157741_c0_seq1.path1;Name=comp157741_c0_seq1;Dir=antisensecoverage=84.1;identity=91.7;matches=666;mismatches=21;indels=39;unknowns=0;Target=comp157741_c0_seq1 323 574 .;locus=RLOC_00015820
Chr2	stalkie_big_nohaplotig	exon	27242399	27242668	100	+	.	Parent=comp157741_c0_seq1.mrna1;Target=comp157741_c0_seq1 600 869 -
Chr2	stalkie_big_nohaplotig	exon	27247551	27247850	98	+	.	Parent=comp157741_c0_seq1.mrna1;Target=comp157741_c0_seq1 300 599 -
Chr2	stalkie_big_nohaplotig	exon	27247903	27247939	89	+	.	Parent=comp157741_c0_seq1.mrna1;Target=comp157741_c0_seq1 263 299 -
Chr2	stalkie_big_nohaplotig	exon	27263247	27263254	100	+	.	Parent=comp157741_c0_seq1.mrna1;Target=comp157741_c0_seq1 242 249 -
Chr2	stalkie_big_nohaplotig	exon	27267033	27267074	44	+	.	Parent=comp157741_c0_seq1.mrna1;Target=comp157741_c0_seq1 174 240 -
Chr2	stalkie_big_nohaplotig	exon	27275679	27275689	90	+	.	Parent=comp157741_c0_seq1.mrna1;Target=comp157741_c0_seq1 163 173 -
Chr2	stalkie_big_nohaplotig	exon	27278506	27278525	63	+	.	Parent=comp157741_c0_seq1.mrna1;Target=comp157741_c0_seq1 133 162 -
Chr2	stalkie_big_nohaplotig	CDS	27247576	27247827	.	+	0	Parent=comp157741_c0_seq1.mrna1
Chr2	gffcl	locus	27285996	27286651	.	+	.	ID=RLOC_00015821;geneIDs=comp143586_c0_seq1.path1;transcripts=comp143586_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27285996	27286651	.	+	.	ID=comp143586_c0_seq1.mrna1;geneID=comp143586_c0_seq1.path1;Name=comp143586_c0_seq1;Dir=sensecoverage=96.6;identity=99.8;matches=576;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015821
Chr2	stalkie_big_nohaplotig	exon	27285996	27286107	100	+	.	Parent=comp143586_c0_seq1.mrna1;Target=comp143586_c0_seq1 2 113 +
Chr2	stalkie_big_nohaplotig	exon	27286187	27286651	99	+	.	Parent=comp143586_c0_seq1.mrna1;Target=comp143586_c0_seq1 114 578 +
Chr2	stalkie_big_nohaplotig	CDS	27286060	27286107	.	+	0	Parent=comp143586_c0_seq1.mrna1;Target=comp143586_c0_seq1 66 113 +
Chr2	stalkie_big_nohaplotig	CDS	27286187	27286528	.	+	0	Parent=comp143586_c0_seq1.mrna1;Target=comp143586_c0_seq1 114 455 +
Chr2	gffcl	locus	27312709	27313335	.	-	.	ID=RLOC_00015822;geneIDs=comp156284_c0_seq1.path1;transcripts=comp156284_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27312709	27313335	.	-	.	ID=comp156284_c0_seq1.mrna1;geneID=comp156284_c0_seq1.path1;Name=comp156284_c0_seq1;Dir=antisensecoverage=97.7;identity=98.6;matches=551;mismatches=8;indels=0;unknowns=0;locus=RLOC_00015822
Chr2	stalkie_big_nohaplotig	exon	27312709	27313011	99	-	.	Parent=comp156284_c0_seq1.mrna1;Target=comp156284_c0_seq1 3 305 -
Chr2	stalkie_big_nohaplotig	exon	27313080	27313335	97	-	.	Parent=comp156284_c0_seq1.mrna1;Target=comp156284_c0_seq1 306 561 -
Chr2	stalkie_big_nohaplotig	CDS	27312956	27313011	.	-	2	Parent=comp156284_c0_seq1.mrna1;Target=comp156284_c0_seq1 250 305 .
Chr2	stalkie_big_nohaplotig	CDS	27313080	27313335	.	-	0	Parent=comp156284_c0_seq1.mrna1;Target=comp156284_c0_seq1 306 561 .
Chr2	gffcl	locus	27328091	27338003	.	+	.	ID=RLOC_00015823;geneIDs=comp154328_c0_seq1.path1;transcripts=comp154328_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27328091	27338003	.	+	.	ID=comp154328_c0_seq1.mrna1;geneID=comp154328_c0_seq1.path1;Name=comp154328_c0_seq1;Dir=antisensecoverage=99.9;identity=99.0;matches=1324;mismatches=10;indels=3;unknowns=0;Target=comp154328_c0_seq1 987 1238 .;locus=RLOC_00015823
Chr2	stalkie_big_nohaplotig	exon	27328091	27328455	96	+	.	Parent=comp154328_c0_seq1.mrna1;Target=comp154328_c0_seq1 970 1337 -
Chr2	stalkie_big_nohaplotig	exon	27334777	27335259	100	+	.	Parent=comp154328_c0_seq1.mrna1;Target=comp154328_c0_seq1 487 969 -
Chr2	stalkie_big_nohaplotig	exon	27337518	27338003	99	+	.	Parent=comp154328_c0_seq1.mrna1;Target=comp154328_c0_seq1 1 486 -
Chr2	stalkie_big_nohaplotig	CDS	27328187	27328438	.	+	0	Parent=comp154328_c0_seq1.mrna1
Chr2	gffcl	locus	27347455	27348684	.	+	.	ID=RLOC_00015824;geneIDs=ORF1108.path1;transcripts=ORF1108.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27347455	27348684	.	+	.	ID=ORF1108.mrna1;geneID=ORF1108.path1;Name=ORF1108;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1227;mismatches=3;indels=0;unknowns=0;Target=ORF1108 1230 1 .;locus=RLOC_00015824
Chr2	stalkie_big_nohaplotig	exon	27347455	27348684	99	+	.	Parent=ORF1108.mrna1
Chr2	stalkie_big_nohaplotig	CDS	27347455	27348684	.	+	0	Parent=ORF1108.mrna1
Chr2	gffcl	locus	27349766	27350459	.	+	.	ID=RLOC_00015825;geneIDs=comp144555_c0_seq1.path1;transcripts=comp144555_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27349766	27350459	.	+	.	ID=comp144555_c0_seq1.mrna1;geneID=comp144555_c0_seq1.path1;Name=comp144555_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=687;mismatches=7;indels=0;unknowns=0;Target=comp144555_c0_seq1 694 1 .;CDS_Target=comp144555_c0_seq1 118 2 .;locus=RLOC_00015825
Chr2	stalkie_big_nohaplotig	exon	27349766	27350459	98	+	.	Parent=comp144555_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	27349767	27349883	.	+	0	Parent=comp144555_c0_seq1.mrna1
Chr2	gffcl	locus	27385383	27385933	.	-	.	ID=RLOC_00015826;geneIDs=FBgn0034475.2.path1;transcripts=FBgn0034475.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27385383	27385933	.	-	.	ID=FBgn0034475.2.mrna1;geneID=FBgn0034475.2.path1;Name=FBgn0034475.2;Dir=sensecoverage=100.0;identity=98.9;matches=439;mismatches=5;indels=0;unknowns=0;locus=RLOC_00015826
Chr2	stalkie_big_nohaplotig	exon	27385383	27385733	99	-	.	Parent=FBgn0034475.2.mrna1;Target=FBgn0034475.2 94 444 +
Chr2	stalkie_big_nohaplotig	exon	27385841	27385933	96	-	.	Parent=FBgn0034475.2.mrna1;Target=FBgn0034475.2 1 93 +
Chr2	stalkie_big_nohaplotig	CDS	27385383	27385733	.	-	0	Parent=FBgn0034475.2.mrna1;Target=FBgn0034475.2 94 444 +
Chr2	stalkie_big_nohaplotig	CDS	27385841	27385933	.	-	0	Parent=FBgn0034475.2.mrna1;Target=FBgn0034475.2 1 93 +
Chr2	gffcl	locus	27389076	27389719	.	-	.	ID=RLOC_00015827;geneIDs=comp154669_c0_seq1.path1;transcripts=comp154669_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27389076	27389719	.	-	.	ID=comp154669_c0_seq1.mrna1;geneID=comp154669_c0_seq1.path1;Name=comp154669_c0_seq1;Dir=sensecoverage=96.4;identity=98.1;matches=570;mismatches=9;indels=2;unknowns=0;locus=RLOC_00015827
Chr2	stalkie_big_nohaplotig	exon	27389076	27389518	97	-	.	Parent=comp154669_c0_seq1.mrna1;Target=comp154669_c0_seq1 137 581 +
Chr2	stalkie_big_nohaplotig	exon	27389584	27389719	99	-	.	Parent=comp154669_c0_seq1.mrna1;Target=comp154669_c0_seq1 1 136 +
Chr2	stalkie_big_nohaplotig	CDS	27389168	27389518	.	-	0	Parent=comp154669_c0_seq1.mrna1;Target=comp154669_c0_seq1 137 487 +
Chr2	stalkie_big_nohaplotig	CDS	27389584	27389640	.	-	0	Parent=comp154669_c0_seq1.mrna1;Target=comp154669_c0_seq1 80 136 +
Chr2	gffcl	locus	27391438	27391937	.	-	.	ID=RLOC_00015828;geneIDs=FBgn0034475.1.path1;transcripts=FBgn0034475.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27391438	27391937	.	-	.	ID=FBgn0034475.1.mrna1;geneID=FBgn0034475.1.path1;Name=FBgn0034475.1;Dir=sensecoverage=100.0;identity=99.3;matches=429;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015828
Chr2	stalkie_big_nohaplotig	exon	27391438	27391779	99	-	.	Parent=FBgn0034475.1.mrna1;Target=FBgn0034475.1 91 432 +
Chr2	stalkie_big_nohaplotig	exon	27391848	27391937	97	-	.	Parent=FBgn0034475.1.mrna1;Target=FBgn0034475.1 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	27391438	27391779	.	-	0	Parent=FBgn0034475.1.mrna1;Target=FBgn0034475.1 91 432 +
Chr2	stalkie_big_nohaplotig	CDS	27391848	27391937	.	-	0	Parent=FBgn0034475.1.mrna1;Target=FBgn0034475.1 1 90 +
Chr2	gffcl	locus	27425648	27426309	.	-	.	ID=RLOC_00015829;geneIDs=comp86980_c0_seq1.path1;transcripts=comp86980_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27425648	27426309	.	-	.	ID=comp86980_c0_seq1.mrna1;geneID=comp86980_c0_seq1.path1;Name=comp86980_c0_seq1;Dir=indeterminatecoverage=96.8;identity=99.8;matches=662;mismatches=0;indels=1;unknowns=0;Target=comp86980_c0_seq1 685 23 .;CDS_Target=comp86980_c0_seq1 595 539 .;locus=RLOC_00015829
Chr2	stalkie_big_nohaplotig	exon	27425648	27426309	99	-	.	Parent=comp86980_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	27425738	27425793	.	-	0	Parent=comp86980_c0_seq1.mrna1
Chr2	gffcl	locus	27434227	27434642	.	+	.	ID=RLOC_00015830;geneIDs=comp136145_c0_seq1.path1;transcripts=comp136145_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27434227	27434642	.	+	.	ID=comp136145_c0_seq1.mrna1;geneID=comp136145_c0_seq1.path1;Name=comp136145_c0_seq1;Dir=indeterminatecoverage=97.2;identity=98.8;matches=411;mismatches=1;indels=4;unknowns=0;Target=comp136145_c0_seq1 424 13 .;CDS_Target=comp136145_c0_seq1 85 14 .;locus=RLOC_00015830
Chr2	stalkie_big_nohaplotig	exon	27434227	27434642	98	+	.	Parent=comp136145_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	27434228	27434299	.	+	0	Parent=comp136145_c0_seq1.mrna1
Chr2	gffcl	locus	27441945	27442534	.	-	.	ID=RLOC_00015832;geneIDs=comp156819_c0_seq1.path1;transcripts=comp156819_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27441945	27442534	.	-	.	ID=comp156819_c0_seq1.mrna1;geneID=comp156819_c0_seq1.path1;Name=comp156819_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=583;mismatches=7;indels=2;unknowns=0;Target=comp156819_c0_seq1 592 1 .;CDS_Target=comp156819_c0_seq1 26 3 .;locus=RLOC_00015832
Chr2	stalkie_big_nohaplotig	exon	27441945	27442534	98	-	.	Parent=comp156819_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	27442509	27442532	.	-	0	Parent=comp156819_c0_seq1.mrna1
Chr2	gffcl	locus	27442545	27443064	.	+	.	ID=RLOC_00015833;geneIDs=comp151404_c0_seq1.path1;transcripts=comp151404_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27442545	27443064	.	+	.	ID=comp151404_c0_seq1.mrna1;geneID=comp151404_c0_seq1.path1;Name=comp151404_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.2;matches=510;mismatches=9;indels=28;unknowns=0;Target=comp151404_c0_seq1 546 1 .;CDS_Target=comp151404_c0_seq1 36 1 .;locus=RLOC_00015833
Chr2	stalkie_big_nohaplotig	exon	27442545	27443064	93	+	.	Parent=comp151404_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	27442545	27442580	.	+	0	Parent=comp151404_c0_seq1.mrna1
Chr2	gffcl	locus	27444269	27444801	.	+	.	ID=RLOC_00015834;geneIDs=comp104578_c0_seq1.path1;transcripts=comp104578_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27444269	27444801	.	+	.	ID=comp104578_c0_seq1.mrna1;geneID=comp104578_c0_seq1.path1;Name=comp104578_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=532;mismatches=1;indels=0;unknowns=0;Target=comp104578_c0_seq1 533 1 .;CDS_Target=comp104578_c0_seq1 140 36 .;locus=RLOC_00015834
Chr2	stalkie_big_nohaplotig	exon	27444269	27444801	99	+	.	Parent=comp104578_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	27444304	27444408	.	+	0	Parent=comp104578_c0_seq1.mrna1
Chr2	gffcl	locus	27473276	27475444	.	+	.	ID=RLOC_00015835;geneIDs=ORF418.path1;transcripts=ORF418.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27473276	27475444	.	+	.	ID=ORF418.mrna1;geneID=ORF418.path1;Name=ORF418;Dir=indeterminatecoverage=100.0;identity=98.4;matches=1840;mismatches=29;indels=0;unknowns=0;locus=RLOC_00015835
Chr2	stalkie_big_nohaplotig	exon	27473276	27474773	98	+	.	Parent=ORF418.mrna1;Target=ORF418 1498 1 .
Chr2	stalkie_big_nohaplotig	exon	27475074	27475444	97	+	.	Parent=ORF418.mrna1;Target=ORF418 1869 1499 .
Chr2	stalkie_big_nohaplotig	CDS	27473276	27474773	.	+	0	Parent=ORF418.mrna1;Target=ORF418 1498 1 .
Chr2	stalkie_big_nohaplotig	CDS	27475074	27475444	.	+	2	Parent=ORF418.mrna1;Target=ORF418 1869 1499 .
Chr2	gffcl	locus	27501348	27502663	.	-	.	ID=RLOC_00015836;geneIDs=comp153441_c0_seq1.path1;transcripts=comp153441_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27501348	27502663	.	-	.	ID=comp153441_c0_seq1.mrna1;geneID=comp153441_c0_seq1.path1;Name=comp153441_c0_seq1;Dir=indeterminatecoverage=100.0;identity=85.4;matches=1118;mismatches=102;indels=89;unknowns=0;Target=comp153441_c0_seq1 825 703 .;locus=RLOC_00015836
Chr2	stalkie_big_nohaplotig	exon	27501348	27501783	77	-	.	Parent=comp153441_c0_seq1.mrna1;Target=comp153441_c0_seq1 1253 872 .
Chr2	stalkie_big_nohaplotig	exon	27501811	27502663	89	-	.	Parent=comp153441_c0_seq1.mrna1;Target=comp153441_c0_seq1 858 1 .
Chr2	stalkie_big_nohaplotig	CDS	27501844	27501965	.	-	0	Parent=comp153441_c0_seq1.mrna1
Chr2	gffcl	locus	27519192	27519649	.	+	.	ID=RLOC_00015837;geneIDs=comp632161_c0_seq1.path1;transcripts=comp632161_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27519192	27519649	.	+	.	ID=comp632161_c0_seq1.mrna1;geneID=comp632161_c0_seq1.path1;Name=comp632161_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=458;mismatches=0;indels=0;unknowns=0;Target=comp632161_c0_seq1 458 1 .;CDS_Target=comp632161_c0_seq1 154 2 .;locus=RLOC_00015837
Chr2	stalkie_big_nohaplotig	exon	27519192	27519649	100	+	.	Parent=comp632161_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	27519193	27519345	.	+	0	Parent=comp632161_c0_seq1.mrna1
Chr2	gffcl	locus	27539245	27540475	.	+	.	ID=RLOC_00015838;geneIDs=comp160343_c0_seq1.path1;transcripts=comp160343_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27539245	27540475	.	+	.	ID=comp160343_c0_seq1.mrna1;geneID=comp160343_c0_seq1.path1;Name=comp160343_c0_seq1;Dir=antisensecoverage=98.1;identity=97.2;matches=1046;mismatches=25;indels=5;unknowns=0;Target=comp160343_c0_seq1 212 730 .;locus=RLOC_00015838
Chr2	stalkie_big_nohaplotig	exon	27539245	27539539	97	+	.	Parent=comp160343_c0_seq1.mrna1;Target=comp160343_c0_seq1 802 1093 -
Chr2	stalkie_big_nohaplotig	exon	27539638	27539700	96	+	.	Parent=comp160343_c0_seq1.mrna1;Target=comp160343_c0_seq1 738 801 -
Chr2	stalkie_big_nohaplotig	exon	27539760	27540475	97	+	.	Parent=comp160343_c0_seq1.mrna1;Target=comp160343_c0_seq1 21 737 -
Chr2	stalkie_big_nohaplotig	CDS	27539767	27540285	.	+	0	Parent=comp160343_c0_seq1.mrna1
Chr2	gffcl	locus	27554720	27576838	.	-	.	ID=RLOC_00015839;geneIDs=comp159452_c1_seq1.path1;transcripts=comp159452_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27554720	27576838	.	-	.	ID=comp159452_c1_seq1.mrna1;geneID=comp159452_c1_seq1.path1;Name=comp159452_c1_seq1;Dir=antisensecoverage=100.0;identity=94.5;matches=1132;mismatches=22;indels=44;unknowns=0;locus=RLOC_00015839
Chr2	stalkie_big_nohaplotig	exon	27554720	27555302	98	-	.	Parent=comp159452_c1_seq1.mrna1;Target=comp159452_c1_seq1 1 583 -
Chr2	stalkie_big_nohaplotig	exon	27555367	27555455	98	-	.	Parent=comp159452_c1_seq1.mrna1;Target=comp159452_c1_seq1 584 672 -
Chr2	stalkie_big_nohaplotig	exon	27556137	27556360	99	-	.	Parent=comp159452_c1_seq1.mrna1;Target=comp159452_c1_seq1 673 896 -
Chr2	stalkie_big_nohaplotig	exon	27576581	27576838	82	-	.	Parent=comp159452_c1_seq1.mrna1;Target=comp159452_c1_seq1 897 1198 -
Chr2	stalkie_big_nohaplotig	CDS	27555411	27555455	.	-	0	Parent=comp159452_c1_seq1.mrna1;Target=comp159452_c1_seq1 628 672 .
Chr2	stalkie_big_nohaplotig	CDS	27556137	27556358	.	-	0	Parent=comp159452_c1_seq1.mrna1;Target=comp159452_c1_seq1 673 894 .
Chr2	gffcl	locus	27614423	27619847	.	+	.	ID=RLOC_00015840;geneIDs=comp152123_c1_seq1.path1;transcripts=comp152123_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27614423	27619847	.	+	.	ID=comp152123_c1_seq1.mrna1;geneID=comp152123_c1_seq1.path1;Name=comp152123_c1_seq1;Dir=antisensecoverage=99.9;identity=99.7;matches=1034;mismatches=3;indels=0;unknowns=0;Target=comp152123_c1_seq1 260 376 .;locus=RLOC_00015840
Chr2	stalkie_big_nohaplotig	exon	27614423	27614962	100	+	.	Parent=comp152123_c1_seq1.mrna1;Target=comp152123_c1_seq1 498 1037 -
Chr2	stalkie_big_nohaplotig	exon	27619351	27619847	99	+	.	Parent=comp152123_c1_seq1.mrna1;Target=comp152123_c1_seq1 1 497 -
Chr2	stalkie_big_nohaplotig	CDS	27619472	27619588	.	+	0	Parent=comp152123_c1_seq1.mrna1
Chr2	gffcl	locus	27633304	27634462	.	+	.	ID=RLOC_00015841;geneIDs=comp159286_c0_seq1.path1;transcripts=comp159286_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27633304	27634462	.	+	.	ID=comp159286_c0_seq1.mrna1;geneID=comp159286_c0_seq1.path1;Name=comp159286_c0_seq1;Dir=antisensecoverage=81.1;identity=95.9;matches=1063;mismatches=33;indels=13;unknowns=0;Target=comp159286_c0_seq1 536 1063 .;locus=RLOC_00015841
Chr2	stalkie_big_nohaplotig	exon	27633304	27633955	98	+	.	Parent=comp159286_c0_seq1.mrna1;Target=comp159286_c0_seq1 457 1109 -
Chr2	stalkie_big_nohaplotig	exon	27634019	27634462	92	+	.	Parent=comp159286_c0_seq1.mrna1;Target=comp159286_c0_seq1 1 456 -
Chr2	stalkie_big_nohaplotig	CDS	27633350	27633877	.	+	0	Parent=comp159286_c0_seq1.mrna1
Chr2	gffcl	locus	27653340	27654755	.	-	.	ID=RLOC_00015842;geneIDs=FBgn0053966.2.path1;transcripts=FBgn0053966.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27653340	27654755	.	-	.	ID=FBgn0053966.2.mrna1;geneID=FBgn0053966.2.path1;Name=FBgn0053966.2;Dir=sensecoverage=100.0;identity=99.2;matches=1036;mismatches=8;indels=0;unknowns=0;locus=RLOC_00015842
Chr2	stalkie_big_nohaplotig	exon	27653340	27653612	99	-	.	Parent=FBgn0053966.2.mrna1;Target=FBgn0053966.2 772 1044 +
Chr2	stalkie_big_nohaplotig	exon	27653672	27654032	99	-	.	Parent=FBgn0053966.2.mrna1;Target=FBgn0053966.2 411 771 +
Chr2	stalkie_big_nohaplotig	exon	27654101	27654482	99	-	.	Parent=FBgn0053966.2.mrna1;Target=FBgn0053966.2 29 410 +
Chr2	stalkie_big_nohaplotig	exon	27654728	27654755	100	-	.	Parent=FBgn0053966.2.mrna1;Target=FBgn0053966.2 1 28 +
Chr2	stalkie_big_nohaplotig	CDS	27653340	27653612	.	-	0	Parent=FBgn0053966.2.mrna1;Target=FBgn0053966.2 772 1044 +
Chr2	stalkie_big_nohaplotig	CDS	27653672	27654032	.	-	1	Parent=FBgn0053966.2.mrna1;Target=FBgn0053966.2 411 771 +
Chr2	stalkie_big_nohaplotig	CDS	27654101	27654482	.	-	2	Parent=FBgn0053966.2.mrna1;Target=FBgn0053966.2 29 410 +
Chr2	stalkie_big_nohaplotig	CDS	27654728	27654755	.	-	0	Parent=FBgn0053966.2.mrna1;Target=FBgn0053966.2 1 28 +
Chr2	gffcl	locus	27674095	27683952	.	-	.	ID=RLOC_00015843;geneIDs=FBgn0033110.3.path1,comp162102_c0_seq1.path1;transcripts=comp162102_c0_seq1.mrna1,FBgn0033110.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27674095	27683950	.	-	.	ID=comp162102_c0_seq1.mrna1;geneID=comp162102_c0_seq1.path1;Name=comp162102_c0_seq1;Dir=antisensecoverage=96.1;identity=99.4;matches=2183;mismatches=13;indels=0;unknowns=0;locus=RLOC_00015843
Chr2	stalkie_big_nohaplotig	exon	27674095	27674311	97	-	.	Parent=comp162102_c0_seq1.mrna1;Target=comp162102_c0_seq1 3 219 -
Chr2	stalkie_big_nohaplotig	exon	27674439	27674547	100	-	.	Parent=comp162102_c0_seq1.mrna1;Target=comp162102_c0_seq1 220 328 -
Chr2	stalkie_big_nohaplotig	exon	27674601	27674743	100	-	.	Parent=comp162102_c0_seq1.mrna1;Target=comp162102_c0_seq1 329 471 -
Chr2	stalkie_big_nohaplotig	exon	27681758	27682092	98	-	.	Parent=comp162102_c0_seq1.mrna1;Target=comp162102_c0_seq1 472 806 -
Chr2	stalkie_big_nohaplotig	exon	27682162	27682275	100	-	.	Parent=comp162102_c0_seq1.mrna1;Target=comp162102_c0_seq1 807 920 -
Chr2	stalkie_big_nohaplotig	exon	27682337	27682635	99	-	.	Parent=comp162102_c0_seq1.mrna1;Target=comp162102_c0_seq1 921 1219 -
Chr2	stalkie_big_nohaplotig	exon	27682782	27683157	100	-	.	Parent=comp162102_c0_seq1.mrna1;Target=comp162102_c0_seq1 1220 1595 -
Chr2	stalkie_big_nohaplotig	exon	27683219	27683362	100	-	.	Parent=comp162102_c0_seq1.mrna1;Target=comp162102_c0_seq1 1596 1739 -
Chr2	stalkie_big_nohaplotig	exon	27683424	27683583	99	-	.	Parent=comp162102_c0_seq1.mrna1;Target=comp162102_c0_seq1 1740 1899 -
Chr2	stalkie_big_nohaplotig	exon	27683652	27683950	99	-	.	Parent=comp162102_c0_seq1.mrna1;Target=comp162102_c0_seq1 1900 2198 -
Chr2	stalkie_big_nohaplotig	CDS	27682458	27682635	.	-	1	Parent=comp162102_c0_seq1.mrna1;Target=comp162102_c0_seq1 1042 1219 .
Chr2	stalkie_big_nohaplotig	CDS	27682782	27683157	.	-	2	Parent=comp162102_c0_seq1.mrna1;Target=comp162102_c0_seq1 1220 1595 .
Chr2	stalkie_big_nohaplotig	CDS	27683219	27683362	.	-	2	Parent=comp162102_c0_seq1.mrna1;Target=comp162102_c0_seq1 1596 1739 .
Chr2	stalkie_big_nohaplotig	CDS	27683424	27683583	.	-	0	Parent=comp162102_c0_seq1.mrna1;Target=comp162102_c0_seq1 1740 1899 .
Chr2	stalkie_big_nohaplotig	CDS	27683652	27683933	.	-	0	Parent=comp162102_c0_seq1.mrna1;Target=comp162102_c0_seq1 1900 2181 .
Chr2	stalkie_big_nohaplotig	mRNA	27674274	27683952	.	-	.	ID=FBgn0033110.3.mrna1;geneID=FBgn0033110.3.path1;Name=FBgn0033110.3;Dir=sensecoverage=99.6;identity=99.7;matches=1925;mismatches=6;indels=0;unknowns=29;locus=RLOC_00015843
Chr2	stalkie_big_nohaplotig	exon	27674274	27674311	100	-	.	Parent=FBgn0033110.3.mrna1;Target=FBgn0033110.3 1931 1968 +
Chr2	stalkie_big_nohaplotig	exon	27674439	27674547	100	-	.	Parent=FBgn0033110.3.mrna1;Target=FBgn0033110.3 1822 1930 +
Chr2	stalkie_big_nohaplotig	exon	27674601	27674743	100	-	.	Parent=FBgn0033110.3.mrna1;Target=FBgn0033110.3 1679 1821 +
Chr2	stalkie_big_nohaplotig	exon	27681758	27682092	98	-	.	Parent=FBgn0033110.3.mrna1;Target=FBgn0033110.3 1344 1678 +
Chr2	stalkie_big_nohaplotig	exon	27682162	27682275	100	-	.	Parent=FBgn0033110.3.mrna1;Target=FBgn0033110.3 1230 1343 +
Chr2	stalkie_big_nohaplotig	exon	27682337	27682416	100	-	.	Parent=FBgn0033110.3.mrna1;Target=FBgn0033110.3 1150 1229 +
Chr2	stalkie_big_nohaplotig	exon	27682476	27682635	100	-	.	Parent=FBgn0033110.3.mrna1;Target=FBgn0033110.3 990 1149 +
Chr2	stalkie_big_nohaplotig	exon	27682782	27683157	100	-	.	Parent=FBgn0033110.3.mrna1;Target=FBgn0033110.3 614 989 +
Chr2	stalkie_big_nohaplotig	exon	27683219	27683362	100	-	.	Parent=FBgn0033110.3.mrna1;Target=FBgn0033110.3 470 613 +
Chr2	stalkie_big_nohaplotig	exon	27683424	27683583	99	-	.	Parent=FBgn0033110.3.mrna1;Target=FBgn0033110.3 310 469 +
Chr2	stalkie_big_nohaplotig	exon	27683652	27683952	99	-	.	Parent=FBgn0033110.3.mrna1;Target=FBgn0033110.3 9 309 +
Chr2	stalkie_big_nohaplotig	CDS	27674274	27674311	.	-	2	Parent=FBgn0033110.3.mrna1;Target=FBgn0033110.3 1931 1968 +
Chr2	stalkie_big_nohaplotig	CDS	27674439	27674547	.	-	0	Parent=FBgn0033110.3.mrna1;Target=FBgn0033110.3 1822 1930 +
Chr2	stalkie_big_nohaplotig	CDS	27674601	27674743	.	-	2	Parent=FBgn0033110.3.mrna1;Target=FBgn0033110.3 1679 1821 +
Chr2	stalkie_big_nohaplotig	CDS	27681758	27682092	.	-	1	Parent=FBgn0033110.3.mrna1;Target=FBgn0033110.3 1344 1678 +
Chr2	stalkie_big_nohaplotig	CDS	27682162	27682275	.	-	1	Parent=FBgn0033110.3.mrna1;Target=FBgn0033110.3 1230 1343 +
Chr2	stalkie_big_nohaplotig	CDS	27682337	27682416	.	-	0	Parent=FBgn0033110.3.mrna1;Target=FBgn0033110.3 1150 1229 +
Chr2	stalkie_big_nohaplotig	CDS	27682476	27682635	.	-	1	Parent=FBgn0033110.3.mrna1;Target=FBgn0033110.3 990 1149 +
Chr2	stalkie_big_nohaplotig	CDS	27682782	27683157	.	-	2	Parent=FBgn0033110.3.mrna1;Target=FBgn0033110.3 614 989 +
Chr2	stalkie_big_nohaplotig	CDS	27683219	27683362	.	-	2	Parent=FBgn0033110.3.mrna1;Target=FBgn0033110.3 470 613 +
Chr2	stalkie_big_nohaplotig	CDS	27683424	27683583	.	-	0	Parent=FBgn0033110.3.mrna1;Target=FBgn0033110.3 310 469 +
Chr2	stalkie_big_nohaplotig	CDS	27683652	27683951	.	-	0	Parent=FBgn0033110.3.mrna1;Target=FBgn0033110.3 10 309 +
Chr2	gffcl	locus	27678566	27678652	.	+	.	ID=RLOC_00015844;geneIDs=comp162102_c0_seq1.path2;transcripts=comp162102_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	27678566	27678652	.	+	.	ID=comp162102_c0_seq1.mrna2;geneID=comp162102_c0_seq1.path2;Name=comp162102_c0_seq1;Dir=indeterminatecoverage=3.8;identity=98.9;matches=86;mismatches=1;indels=0;unknowns=0;Target=comp162102_c0_seq1 2285 2199 .;locus=RLOC_00015844
Chr2	stalkie_big_nohaplotig	exon	27678566	27678652	98	+	.	Parent=comp162102_c0_seq1.mrna2
Chr2	gffcl	locus	27725926	27744706	.	-	.	ID=RLOC_00015845;geneIDs=comp156249_c0_seq1.path1;transcripts=comp156249_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27725926	27744706	.	-	.	ID=comp156249_c0_seq1.mrna1;geneID=comp156249_c0_seq1.path1;Name=comp156249_c0_seq1;Dir=sensecoverage=98.3;identity=95.3;matches=912;mismatches=42;indels=3;unknowns=0;Target=comp156249_c0_seq1 681 860 +;locus=RLOC_00015845
Chr2	stalkie_big_nohaplotig	exon	27725926	27726288	96	-	.	Parent=comp156249_c0_seq1.mrna1;Target=comp156249_c0_seq1 612 974 +
Chr2	stalkie_big_nohaplotig	exon	27726604	27726679	90	-	.	Parent=comp156249_c0_seq1.mrna1;Target=comp156249_c0_seq1 536 611 +
Chr2	stalkie_big_nohaplotig	exon	27726732	27726800	88	-	.	Parent=comp156249_c0_seq1.mrna1;Target=comp156249_c0_seq1 464 535 +
Chr2	stalkie_big_nohaplotig	exon	27744261	27744706	96	-	.	Parent=comp156249_c0_seq1.mrna1;Target=comp156249_c0_seq1 18 463 +
Chr2	stalkie_big_nohaplotig	CDS	27726040	27726219	.	-	0	Parent=comp156249_c0_seq1.mrna1
Chr2	gffcl	locus	27727428	27728202	.	+	.	ID=RLOC_00015846;geneIDs=comp151854_c0_seq1.path1;transcripts=comp151854_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27727428	27728202	.	+	.	ID=comp151854_c0_seq1.mrna1;geneID=comp151854_c0_seq1.path1;Name=comp151854_c0_seq1;Dir=indeterminatecoverage=99.3;identity=98.6;matches=650;mismatches=5;indels=4;unknowns=0;Target=comp151854_c0_seq1 467 120 .;locus=RLOC_00015846
Chr2	stalkie_big_nohaplotig	exon	27727428	27727915	99	+	.	Parent=comp151854_c0_seq1.mrna1;Target=comp151854_c0_seq1 490 3 .
Chr2	stalkie_big_nohaplotig	exon	27728032	27728202	97	+	.	Parent=comp151854_c0_seq1.mrna1;Target=comp151854_c0_seq1 688 522 .
Chr2	stalkie_big_nohaplotig	CDS	27727545	27727892	.	+	0	Parent=comp151854_c0_seq1.mrna1
Chr2	gffcl	locus	27795473	27795662	.	+	.	ID=RLOC_00015848;geneIDs=comp157192_c0_seq1.path1;transcripts=comp157192_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27795473	27795662	.	+	.	ID=comp157192_c0_seq1.mrna1;geneID=comp157192_c0_seq1.path1;Name=comp157192_c0_seq1;Dir=indeterminatecoverage=20.4;identity=98.4;matches=187;mismatches=3;indels=0;unknowns=0;Target=comp157192_c0_seq1 190 1 .;locus=RLOC_00015848
Chr2	stalkie_big_nohaplotig	exon	27795473	27795662	98	+	.	Parent=comp157192_c0_seq1.mrna1
Chr2	gffcl	locus	27800173	27801347	.	+	.	ID=RLOC_00015849;geneIDs=comp133218_c1_seq1.path1;transcripts=comp133218_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27800173	27801347	.	+	.	ID=comp133218_c1_seq1.mrna1;geneID=comp133218_c1_seq1.path1;Name=comp133218_c1_seq1;Dir=indeterminatecoverage=100.0;identity=94.5;matches=1111;mismatches=52;indels=13;unknowns=0;Target=comp133218_c1_seq1 1164 1 .;CDS_Target=comp133218_c1_seq1 903 721 .;locus=RLOC_00015849
Chr2	stalkie_big_nohaplotig	exon	27800173	27801347	94	+	.	Parent=comp133218_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	27800904	27801086	.	+	0	Parent=comp133218_c1_seq1.mrna1
Chr2	gffcl	locus	27825118	27836736	.	+	.	ID=RLOC_00015850;geneIDs=comp155600_c0_seq1.path1;transcripts=comp155600_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27825118	27836736	.	+	.	ID=comp155600_c0_seq1.mrna1;geneID=comp155600_c0_seq1.path1;Name=comp155600_c0_seq1;Dir=antisensecoverage=96.6;identity=95.7;matches=1250;mismatches=20;indels=36;unknowns=0;locus=RLOC_00015850
Chr2	stalkie_big_nohaplotig	exon	27825118	27825317	99	+	.	Parent=comp155600_c0_seq1.mrna1;Target=comp155600_c0_seq1 1071 1270 -
Chr2	stalkie_big_nohaplotig	exon	27833421	27833636	96	+	.	Parent=comp155600_c0_seq1.mrna1;Target=comp155600_c0_seq1 855 1070 -
Chr2	stalkie_big_nohaplotig	exon	27835644	27835979	98	+	.	Parent=comp155600_c0_seq1.mrna1;Target=comp155600_c0_seq1 519 854 -
Chr2	stalkie_big_nohaplotig	exon	27836122	27836334	98	+	.	Parent=comp155600_c0_seq1.mrna1;Target=comp155600_c0_seq1 306 518 -
Chr2	stalkie_big_nohaplotig	exon	27836396	27836736	88	+	.	Parent=comp155600_c0_seq1.mrna1;Target=comp155600_c0_seq1 1 305 -
Chr2	stalkie_big_nohaplotig	CDS	27833550	27833636	.	+	0	Parent=comp155600_c0_seq1.mrna1;Target=comp155600_c0_seq1 855 941 .
Chr2	stalkie_big_nohaplotig	CDS	27835644	27835979	.	+	0	Parent=comp155600_c0_seq1.mrna1;Target=comp155600_c0_seq1 519 854 .
Chr2	stalkie_big_nohaplotig	CDS	27836122	27836334	.	+	0	Parent=comp155600_c0_seq1.mrna1;Target=comp155600_c0_seq1 306 518 .
Chr2	stalkie_big_nohaplotig	CDS	27836396	27836440	.	+	0	Parent=comp155600_c0_seq1.mrna1;Target=comp155600_c0_seq1 261 305 .
Chr2	gffcl	locus	27841757	27845311	.	+	.	ID=RLOC_00015851;geneIDs=comp107370_c0_seq1.path1,comp162142_c0_seq1.path1;transcripts=comp162142_c0_seq1.mrna1,comp107370_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27841757	27844462	.	+	.	ID=comp162142_c0_seq1.mrna1;geneID=comp162142_c0_seq1.path1;Name=comp162142_c0_seq1;Dir=sensecoverage=99.2;identity=94.4;matches=2151;mismatches=76;indels=51;unknowns=0;Target=comp162142_c0_seq1 472 1044 +;locus=RLOC_00015851
Chr2	stalkie_big_nohaplotig	exon	27841757	27842071	95	+	.	Parent=comp162142_c0_seq1.mrna1;Target=comp162142_c0_seq1 17 335 +
Chr2	stalkie_big_nohaplotig	exon	27842385	27842480	96	+	.	Parent=comp162142_c0_seq1.mrna1;Target=comp162142_c0_seq1 336 431 +
Chr2	stalkie_big_nohaplotig	exon	27842544	27843405	97	+	.	Parent=comp162142_c0_seq1.mrna1;Target=comp162142_c0_seq1 432 1293 +
Chr2	stalkie_big_nohaplotig	exon	27843466	27844462	90	+	.	Parent=comp162142_c0_seq1.mrna1;Target=comp162142_c0_seq1 1294 2251 +
Chr2	stalkie_big_nohaplotig	CDS	27842584	27843156	.	+	0	Parent=comp162142_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27843382	27845311	.	+	.	ID=comp107370_c0_seq1.mrna1;geneID=comp107370_c0_seq1.path1;Name=comp107370_c0_seq1;Dir=antisensecoverage=99.5;identity=100.0;matches=401;mismatches=0;indels=0;unknowns=0;Target=comp107370_c0_seq1 55 138 .;locus=RLOC_00015851
Chr2	stalkie_big_nohaplotig	exon	27843382	27843405	100	+	.	Parent=comp107370_c0_seq1.mrna1;Target=comp107370_c0_seq1 380 403 -
Chr2	stalkie_big_nohaplotig	exon	27844935	27845311	100	+	.	Parent=comp107370_c0_seq1.mrna1;Target=comp107370_c0_seq1 3 379 -
Chr2	stalkie_big_nohaplotig	CDS	27845176	27845259	.	+	0	Parent=comp107370_c0_seq1.mrna1
Chr2	gffcl	locus	27866272	27867224	.	-	.	ID=RLOC_00015852;geneIDs=comp157192_c0_seq1.path2;transcripts=comp157192_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	27866272	27867224	.	-	.	ID=comp157192_c0_seq1.mrna2;geneID=comp157192_c0_seq1.path2;Name=comp157192_c0_seq1;Dir=sensecoverage=79.4;identity=97.6;matches=723;mismatches=15;indels=3;unknowns=0;locus=RLOC_00015852
Chr2	stalkie_big_nohaplotig	exon	27866272	27866545	97	-	.	Parent=comp157192_c0_seq1.mrna2;Target=comp157192_c0_seq1 655 931 +
Chr2	stalkie_big_nohaplotig	exon	27866609	27866728	98	-	.	Parent=comp157192_c0_seq1.mrna2;Target=comp157192_c0_seq1 535 654 +
Chr2	stalkie_big_nohaplotig	exon	27866804	27866963	99	-	.	Parent=comp157192_c0_seq1.mrna2;Target=comp157192_c0_seq1 375 534 +
Chr2	stalkie_big_nohaplotig	exon	27867041	27867224	96	-	.	Parent=comp157192_c0_seq1.mrna2;Target=comp157192_c0_seq1 191 374 +
Chr2	stalkie_big_nohaplotig	CDS	27866439	27866545	.	-	2	Parent=comp157192_c0_seq1.mrna2;Target=comp157192_c0_seq1 655 761 +
Chr2	stalkie_big_nohaplotig	CDS	27866609	27866728	.	-	2	Parent=comp157192_c0_seq1.mrna2;Target=comp157192_c0_seq1 535 654 +
Chr2	stalkie_big_nohaplotig	CDS	27866804	27866918	.	-	0	Parent=comp157192_c0_seq1.mrna2;Target=comp157192_c0_seq1 420 534 +
Chr2	gffcl	locus	27867793	27868193	.	-	.	ID=RLOC_00015853;geneIDs=comp146619_c2_seq1.path1;transcripts=comp146619_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27867793	27868193	.	-	.	ID=comp146619_c2_seq1.mrna1;geneID=comp146619_c2_seq1.path1;Name=comp146619_c2_seq1;Dir=indeterminatecoverage=99.8;identity=99.0;matches=397;mismatches=4;indels=0;unknowns=0;Target=comp146619_c2_seq1 402 2 .;CDS_Target=comp146619_c2_seq1 372 265 .;locus=RLOC_00015853
Chr2	stalkie_big_nohaplotig	exon	27867793	27868193	99	-	.	Parent=comp146619_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	27867823	27867930	.	-	0	Parent=comp146619_c2_seq1.mrna1
Chr2	gffcl	locus	27882008	27882593	.	+	.	ID=RLOC_00015854;geneIDs=comp148719_c0_seq1.path1;transcripts=comp148719_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27882008	27882593	.	+	.	ID=comp148719_c0_seq1.mrna1;geneID=comp148719_c0_seq1.path1;Name=comp148719_c0_seq1;Dir=indeterminatecoverage=99.0;identity=98.3;matches=576;mismatches=10;indels=0;unknowns=0;Target=comp148719_c0_seq1 592 7 .;CDS_Target=comp148719_c0_seq1 360 205 .;locus=RLOC_00015854
Chr2	stalkie_big_nohaplotig	exon	27882008	27882593	98	+	.	Parent=comp148719_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	27882206	27882361	.	+	0	Parent=comp148719_c0_seq1.mrna1
Chr2	gffcl	locus	27887426	27888263	.	+	.	ID=RLOC_00015855;geneIDs=comp147620_c0_seq1.path1;transcripts=comp147620_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27887426	27888263	.	+	.	ID=comp147620_c0_seq1.mrna1;geneID=comp147620_c0_seq1.path1;Name=comp147620_c0_seq1;Dir=sensecoverage=99.9;identity=98.9;matches=689;mismatches=8;indels=0;unknowns=0;locus=RLOC_00015855
Chr2	stalkie_big_nohaplotig	exon	27887426	27887745	97	+	.	Parent=comp147620_c0_seq1.mrna1;Target=comp147620_c0_seq1 1 320 +
Chr2	stalkie_big_nohaplotig	exon	27887819	27888073	100	+	.	Parent=comp147620_c0_seq1.mrna1;Target=comp147620_c0_seq1 321 575 +
Chr2	stalkie_big_nohaplotig	exon	27888142	27888263	100	+	.	Parent=comp147620_c0_seq1.mrna1;Target=comp147620_c0_seq1 576 697 +
Chr2	stalkie_big_nohaplotig	CDS	27887826	27888073	.	+	0	Parent=comp147620_c0_seq1.mrna1;Target=comp147620_c0_seq1 328 575 +
Chr2	stalkie_big_nohaplotig	CDS	27888142	27888169	.	+	1	Parent=comp147620_c0_seq1.mrna1;Target=comp147620_c0_seq1 576 603 +
Chr2	gffcl	locus	27913016	27915644	.	+	.	ID=RLOC_00015856;geneIDs=FBgn0031804.1.path1;transcripts=FBgn0031804.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27913016	27915644	.	+	.	ID=FBgn0031804.1.mrna1;geneID=FBgn0031804.1.path1;Name=FBgn0031804.1;Dir=sensecoverage=100.0;identity=100.0;matches=1065;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015856
Chr2	stalkie_big_nohaplotig	exon	27913016	27913144	100	+	.	Parent=FBgn0031804.1.mrna1;Target=FBgn0031804.1 1 129 +
Chr2	stalkie_big_nohaplotig	exon	27913226	27913344	100	+	.	Parent=FBgn0031804.1.mrna1;Target=FBgn0031804.1 130 248 +
Chr2	stalkie_big_nohaplotig	exon	27914609	27914685	100	+	.	Parent=FBgn0031804.1.mrna1;Target=FBgn0031804.1 249 325 +
Chr2	stalkie_big_nohaplotig	exon	27914752	27914827	100	+	.	Parent=FBgn0031804.1.mrna1;Target=FBgn0031804.1 326 401 +
Chr2	stalkie_big_nohaplotig	exon	27914914	27915444	100	+	.	Parent=FBgn0031804.1.mrna1;Target=FBgn0031804.1 402 932 +
Chr2	stalkie_big_nohaplotig	exon	27915512	27915644	100	+	.	Parent=FBgn0031804.1.mrna1;Target=FBgn0031804.1 933 1065 +
Chr2	stalkie_big_nohaplotig	CDS	27913016	27913144	.	+	0	Parent=FBgn0031804.1.mrna1;Target=FBgn0031804.1 1 129 +
Chr2	stalkie_big_nohaplotig	CDS	27913226	27913344	.	+	0	Parent=FBgn0031804.1.mrna1;Target=FBgn0031804.1 130 248 +
Chr2	stalkie_big_nohaplotig	CDS	27914609	27914685	.	+	1	Parent=FBgn0031804.1.mrna1;Target=FBgn0031804.1 249 325 +
Chr2	stalkie_big_nohaplotig	CDS	27914752	27914827	.	+	2	Parent=FBgn0031804.1.mrna1;Target=FBgn0031804.1 326 401 +
Chr2	stalkie_big_nohaplotig	CDS	27914914	27915444	.	+	1	Parent=FBgn0031804.1.mrna1;Target=FBgn0031804.1 402 932 +
Chr2	stalkie_big_nohaplotig	CDS	27915512	27915644	.	+	1	Parent=FBgn0031804.1.mrna1;Target=FBgn0031804.1 933 1065 +
Chr2	gffcl	locus	27940496	27978056	.	-	.	ID=RLOC_00015857;geneIDs=comp160463_c1_seq1.path1;transcripts=comp160463_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27940496	27978056	.	-	.	ID=comp160463_c1_seq1.mrna1;geneID=comp160463_c1_seq1.path1;Name=comp160463_c1_seq1;Dir=sensecoverage=96.8;identity=96.9;matches=1696;mismatches=54;indels=1;unknowns=0;Target=comp160463_c1_seq1 142 186 +;locus=RLOC_00015857
Chr2	stalkie_big_nohaplotig	exon	27940496	27940779	97	-	.	Parent=comp160463_c1_seq1.mrna1;Target=comp160463_c1_seq1 1467 1750 +
Chr2	stalkie_big_nohaplotig	exon	27940833	27941515	95	-	.	Parent=comp160463_c1_seq1.mrna1;Target=comp160463_c1_seq1 784 1466 +
Chr2	stalkie_big_nohaplotig	exon	27941590	27941688	96	-	.	Parent=comp160463_c1_seq1.mrna1;Target=comp160463_c1_seq1 685 783 +
Chr2	stalkie_big_nohaplotig	exon	27941823	27941944	99	-	.	Parent=comp160463_c1_seq1.mrna1;Target=comp160463_c1_seq1 563 684 +
Chr2	stalkie_big_nohaplotig	exon	27977326	27977367	100	-	.	Parent=comp160463_c1_seq1.mrna1;Target=comp160463_c1_seq1 521 562 +
Chr2	stalkie_big_nohaplotig	exon	27977536	27978056	98	-	.	Parent=comp160463_c1_seq1.mrna1;Target=comp160463_c1_seq1 1 520 +
Chr2	stalkie_big_nohaplotig	CDS	27977870	27977915	.	-	0	Parent=comp160463_c1_seq1.mrna1
Chr2	gffcl	locus	27978795	27979845	.	+	.	ID=RLOC_00015858;geneIDs=comp150949_c0_seq1.path1;transcripts=comp150949_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27978795	27979845	.	+	.	ID=comp150949_c0_seq1.mrna1;geneID=comp150949_c0_seq1.path1;Name=comp150949_c0_seq1;Dir=sensecoverage=100.0;identity=98.4;matches=838;mismatches=14;indels=0;unknowns=0;locus=RLOC_00015858
Chr2	stalkie_big_nohaplotig	exon	27978795	27979251	98	+	.	Parent=comp150949_c0_seq1.mrna1;Target=comp150949_c0_seq1 1 457 +
Chr2	stalkie_big_nohaplotig	exon	27979326	27979464	97	+	.	Parent=comp150949_c0_seq1.mrna1;Target=comp150949_c0_seq1 458 596 +
Chr2	stalkie_big_nohaplotig	exon	27979524	27979643	100	+	.	Parent=comp150949_c0_seq1.mrna1;Target=comp150949_c0_seq1 597 716 +
Chr2	stalkie_big_nohaplotig	exon	27979710	27979845	98	+	.	Parent=comp150949_c0_seq1.mrna1;Target=comp150949_c0_seq1 717 852 +
Chr2	stalkie_big_nohaplotig	CDS	27979000	27979251	.	+	0	Parent=comp150949_c0_seq1.mrna1;Target=comp150949_c0_seq1 206 457 +
Chr2	stalkie_big_nohaplotig	CDS	27979326	27979464	.	+	0	Parent=comp150949_c0_seq1.mrna1;Target=comp150949_c0_seq1 458 596 +
Chr2	stalkie_big_nohaplotig	CDS	27979524	27979643	.	+	2	Parent=comp150949_c0_seq1.mrna1;Target=comp150949_c0_seq1 597 716 +
Chr2	stalkie_big_nohaplotig	CDS	27979710	27979780	.	+	2	Parent=comp150949_c0_seq1.mrna1;Target=comp150949_c0_seq1 717 787 +
Chr2	gffcl	locus	27981170	27985846	.	-	.	ID=RLOC_00015859;geneIDs=ORF2797.path1;transcripts=ORF2797.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27981170	27985846	.	-	.	ID=ORF2797.mrna1;geneID=ORF2797.path1;Name=ORF2797;Dir=sensecoverage=100.0;identity=98.5;matches=792;mismatches=12;indels=0;unknowns=0;locus=RLOC_00015859
Chr2	stalkie_big_nohaplotig	exon	27981170	27981934	98	-	.	Parent=ORF2797.mrna1;Target=ORF2797 40 804 +
Chr2	stalkie_big_nohaplotig	exon	27985808	27985846	100	-	.	Parent=ORF2797.mrna1;Target=ORF2797 1 39 +
Chr2	stalkie_big_nohaplotig	CDS	27981170	27981934	.	-	0	Parent=ORF2797.mrna1;Target=ORF2797 40 804 +
Chr2	stalkie_big_nohaplotig	CDS	27985808	27985846	.	-	0	Parent=ORF2797.mrna1;Target=ORF2797 1 39 +
Chr2	gffcl	locus	27991923	27992929	.	-	.	ID=RLOC_00015860;geneIDs=comp152667_c0_seq1.path1;transcripts=comp152667_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	27991923	27992929	.	-	.	ID=comp152667_c0_seq1.mrna1;geneID=comp152667_c0_seq1.path1;Name=comp152667_c0_seq1;Dir=sensecoverage=96.1;identity=94.1;matches=818;mismatches=23;indels=28;unknowns=0;locus=RLOC_00015860
Chr2	stalkie_big_nohaplotig	exon	27991923	27992221	89	-	.	Parent=comp152667_c0_seq1.mrna1;Target=comp152667_c0_seq1 566 871 +
Chr2	stalkie_big_nohaplotig	exon	27992280	27992605	98	-	.	Parent=comp152667_c0_seq1.mrna1;Target=comp152667_c0_seq1 240 565 +
Chr2	stalkie_big_nohaplotig	exon	27992705	27992929	94	-	.	Parent=comp152667_c0_seq1.mrna1;Target=comp152667_c0_seq1 12 239 +
Chr2	stalkie_big_nohaplotig	CDS	27992414	27992605	.	-	0	Parent=comp152667_c0_seq1.mrna1;Target=comp152667_c0_seq1 240 431 +
Chr2	stalkie_big_nohaplotig	CDS	27992705	27992809	.	-	0	Parent=comp152667_c0_seq1.mrna1;Target=comp152667_c0_seq1 135 239 +
Chr2	gffcl	locus	28011076	28023911	.	+	.	ID=RLOC_00015861;geneIDs=comp152890_c0_seq1.path1;transcripts=comp152890_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28011076	28023911	.	+	.	ID=comp152890_c0_seq1.mrna1;geneID=comp152890_c0_seq1.path1;Name=comp152890_c0_seq1;Dir=sensecoverage=99.0;identity=98.4;matches=1775;mismatches=20;indels=9;unknowns=0;Target=comp152890_c0_seq1 147 638 +;locus=RLOC_00015861
Chr2	stalkie_big_nohaplotig	exon	28011076	28011830	98	+	.	Parent=comp152890_c0_seq1.mrna1;Target=comp152890_c0_seq1 2 755 +
Chr2	stalkie_big_nohaplotig	exon	28011882	28011945	95	+	.	Parent=comp152890_c0_seq1.mrna1;Target=comp152890_c0_seq1 756 819 +
Chr2	stalkie_big_nohaplotig	exon	28013345	28013778	98	+	.	Parent=comp152890_c0_seq1.mrna1;Target=comp152890_c0_seq1 820 1259 +
Chr2	stalkie_big_nohaplotig	exon	28013845	28014147	97	+	.	Parent=comp152890_c0_seq1.mrna1;Target=comp152890_c0_seq1 1260 1564 +
Chr2	stalkie_big_nohaplotig	exon	28023672	28023911	99	+	.	Parent=comp152890_c0_seq1.mrna1;Target=comp152890_c0_seq1 1565 1804 +
Chr2	stalkie_big_nohaplotig	CDS	28011222	28011713	.	+	0	Parent=comp152890_c0_seq1.mrna1
Chr2	gffcl	locus	28020977	28022006	.	-	.	ID=RLOC_00015862;geneIDs=comp133733_c1_seq1.path1;transcripts=comp133733_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28020977	28022006	.	-	.	ID=comp133733_c1_seq1.mrna1;geneID=comp133733_c1_seq1.path1;Name=comp133733_c1_seq1;Dir=indeterminatecoverage=96.9;identity=98.7;matches=1017;mismatches=13;indels=0;unknowns=0;Target=comp133733_c1_seq1 1031 2 .;CDS_Target=comp133733_c1_seq1 661 428 .;locus=RLOC_00015862
Chr2	stalkie_big_nohaplotig	exon	28020977	28022006	98	-	.	Parent=comp133733_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28021347	28021580	.	-	0	Parent=comp133733_c1_seq1.mrna1
Chr2	gffcl	locus	28022776	28023571	.	+	.	ID=RLOC_00015863;geneIDs=comp134895_c0_seq1.path1;transcripts=comp134895_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28022776	28023571	.	+	.	ID=comp134895_c0_seq1.mrna1;geneID=comp134895_c0_seq1.path1;Name=comp134895_c0_seq1;Dir=indeterminatecoverage=96.2;identity=89.6;matches=732;mismatches=39;indels=46;unknowns=0;Target=comp134895_c0_seq1 835 758 .;locus=RLOC_00015863
Chr2	stalkie_big_nohaplotig	exon	28022776	28023481	88	+	.	Parent=comp134895_c0_seq1.mrna1;Target=comp134895_c0_seq1 736 33 .
Chr2	stalkie_big_nohaplotig	exon	28023483	28023571	100	+	.	Parent=comp134895_c0_seq1.mrna1;Target=comp134895_c0_seq1 835 747 .
Chr2	stalkie_big_nohaplotig	CDS	28023494	28023571	.	+	0	Parent=comp134895_c0_seq1.mrna1
Chr2	gffcl	locus	28031382	28031737	.	.	.	ID=RLOC_00015864;geneIDs=comp158108_c0_seq1.path1,comp158108_c0_seq1.path2;transcripts=comp158108_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28031382	28031737	.	+	.	ID=comp158108_c0_seq1.mrna1;geneID=comp158108_c0_seq1.path1;Name=comp158108_c0_seq1;Dir=indeterminatecoverage=69.7;identity=98.3;matches=350;mismatches=6;indels=0;unknowns=0;Target=comp158108_c0_seq1 356 1 .;CDS_Target=comp158108_c0_seq1 90 1 .;locus=RLOC_00015864
Chr2	stalkie_big_nohaplotig	exon	28031382	28031737	98	+	.	Parent=comp158108_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28031382	28031471	.	+	0	Parent=comp158108_c0_seq1.mrna1
Chr2	gffcl	locus	28032718	28096482	.	+	.	ID=RLOC_00015865;geneIDs=comp145754_c0_seq1.path1;transcripts=comp145754_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28032718	28096482	.	+	.	ID=comp145754_c0_seq1.mrna1;geneID=comp145754_c0_seq1.path1;Name=comp145754_c0_seq1;Dir=antisensecoverage=99.9;identity=97.9;matches=784;mismatches=14;indels=3;unknowns=0;Target=comp145754_c0_seq1 181 279 .;locus=RLOC_00015865
Chr2	stalkie_big_nohaplotig	exon	28032718	28033383	97	+	.	Parent=comp145754_c0_seq1.mrna1;Target=comp145754_c0_seq1 134 801 -
Chr2	stalkie_big_nohaplotig	exon	28096351	28096482	97	+	.	Parent=comp145754_c0_seq1.mrna1;Target=comp145754_c0_seq1 1 133 -
Chr2	stalkie_big_nohaplotig	CDS	28033238	28033336	.	+	0	Parent=comp145754_c0_seq1.mrna1
Chr2	gffcl	locus	28046821	28047902	.	-	.	ID=RLOC_00015866;geneIDs=comp148094_c0_seq1.path1;transcripts=comp148094_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28046821	28047902	.	-	.	ID=comp148094_c0_seq1.mrna1;geneID=comp148094_c0_seq1.path1;Name=comp148094_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.5;matches=1077;mismatches=5;indels=0;unknowns=0;Target=comp148094_c0_seq1 1083 2 .;CDS_Target=comp148094_c0_seq1 565 131 .;locus=RLOC_00015866
Chr2	stalkie_big_nohaplotig	exon	28046821	28047902	99	-	.	Parent=comp148094_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28047339	28047773	.	-	0	Parent=comp148094_c0_seq1.mrna1
Chr2	gffcl	locus	28061726	28062271	.	-	.	ID=RLOC_00015867;geneIDs=comp146043_c0_seq1.path1;transcripts=comp146043_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28061726	28062271	.	-	.	ID=comp146043_c0_seq1.mrna1;geneID=comp146043_c0_seq1.path1;Name=comp146043_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.9;matches=539;mismatches=3;indels=32;unknowns=0;Target=comp146043_c0_seq1 570 1 .;CDS_Target=comp146043_c0_seq1 274 89 .;locus=RLOC_00015867
Chr2	stalkie_big_nohaplotig	exon	28061726	28062271	93	-	.	Parent=comp146043_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28061999	28062184	.	-	0	Parent=comp146043_c0_seq1.mrna1
Chr2	gffcl	locus	28092276	28192362	.	-	.	ID=RLOC_00015868;geneIDs=comp155401_c0_seq1.path1;transcripts=comp155401_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28092276	28192362	.	-	.	ID=comp155401_c0_seq1.mrna1;geneID=comp155401_c0_seq1.path1;Name=comp155401_c0_seq1;Dir=antisensecoverage=99.9;identity=99.6;matches=1491;mismatches=5;indels=1;unknowns=0;Target=comp155401_c0_seq1 189 341 .;locus=RLOC_00015868
Chr2	stalkie_big_nohaplotig	exon	28092276	28092884	99	-	.	Parent=comp155401_c0_seq1.mrna1;Target=comp155401_c0_seq1 1 608 -
Chr2	stalkie_big_nohaplotig	exon	28092964	28092965	100	-	.	Parent=comp155401_c0_seq1.mrna1;Target=comp155401_c0_seq1 609 610 -
Chr2	stalkie_big_nohaplotig	exon	28100741	28100744	100	-	.	Parent=comp155401_c0_seq1.mrna1;Target=comp155401_c0_seq1 611 614 -
Chr2	stalkie_big_nohaplotig	exon	28101368	28101376	100	-	.	Parent=comp155401_c0_seq1.mrna1;Target=comp155401_c0_seq1 615 623 -
Chr2	stalkie_big_nohaplotig	exon	28103090	28103092	100	-	.	Parent=comp155401_c0_seq1.mrna1;Target=comp155401_c0_seq1 624 626 -
Chr2	stalkie_big_nohaplotig	exon	28107803	28107976	100	-	.	Parent=comp155401_c0_seq1.mrna1;Target=comp155401_c0_seq1 627 800 -
Chr2	stalkie_big_nohaplotig	exon	28190994	28191103	100	-	.	Parent=comp155401_c0_seq1.mrna1;Target=comp155401_c0_seq1 801 910 -
Chr2	stalkie_big_nohaplotig	exon	28191170	28191382	99	-	.	Parent=comp155401_c0_seq1.mrna1;Target=comp155401_c0_seq1 911 1123 -
Chr2	stalkie_big_nohaplotig	exon	28191990	28192362	99	-	.	Parent=comp155401_c0_seq1.mrna1;Target=comp155401_c0_seq1 1124 1496 -
Chr2	stalkie_big_nohaplotig	CDS	28092464	28092616	.	-	0	Parent=comp155401_c0_seq1.mrna1
Chr2	gffcl	locus	28195164	28198520	.	+	.	ID=RLOC_00015869;geneIDs=comp160184_c3_seq1.path1;transcripts=comp160184_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28195164	28198520	.	+	.	ID=comp160184_c3_seq1.mrna1;geneID=comp160184_c3_seq1.path1;Name=comp160184_c3_seq1;Dir=sensecoverage=98.3;identity=99.2;matches=1327;mismatches=11;indels=0;unknowns=0;Target=comp160184_c3_seq1 503 988 +;locus=RLOC_00015869
Chr2	stalkie_big_nohaplotig	exon	28195164	28195244	100	+	.	Parent=comp160184_c3_seq1.mrna1;Target=comp160184_c3_seq1 24 104 +
Chr2	stalkie_big_nohaplotig	exon	28195298	28195546	100	+	.	Parent=comp160184_c3_seq1.mrna1;Target=comp160184_c3_seq1 105 353 +
Chr2	stalkie_big_nohaplotig	exon	28197447	28198115	98	+	.	Parent=comp160184_c3_seq1.mrna1;Target=comp160184_c3_seq1 354 1022 +
Chr2	stalkie_big_nohaplotig	exon	28198182	28198520	98	+	.	Parent=comp160184_c3_seq1.mrna1;Target=comp160184_c3_seq1 1023 1361 +
Chr2	stalkie_big_nohaplotig	CDS	28197596	28198081	.	+	0	Parent=comp160184_c3_seq1.mrna1
Chr2	gffcl	locus	28200764	28203284	.	+	.	ID=RLOC_00015870;geneIDs=comp135991_c0_seq1.path1,comp155272_c0_seq1.path1;transcripts=comp155272_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28201902	28203284	.	+	.	ID=comp155272_c0_seq1.mrna1;geneID=comp155272_c0_seq1.path1;Name=comp155272_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=1304;mismatches=13;indels=1;unknowns=0;Target=comp155272_c0_seq1 446 1171 .;locus=RLOC_00015870
Chr2	stalkie_big_nohaplotig	exon	28201902	28203123	99	+	.	Parent=comp155272_c0_seq1.mrna1;Target=comp155272_c0_seq1 96 1318 -
Chr2	stalkie_big_nohaplotig	exon	28203190	28203284	94	+	.	Parent=comp155272_c0_seq1.mrna1;Target=comp155272_c0_seq1 1 95 -
Chr2	stalkie_big_nohaplotig	CDS	28202049	28202774	.	+	0	Parent=comp155272_c0_seq1.mrna1
Chr2	gffcl	locus	28205363	28206645	.	+	.	ID=RLOC_00015871;geneIDs=comp143612_c0_seq1.path1,comp143612_c0_seq1.path2;transcripts=comp143612_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28205363	28206645	.	+	.	ID=comp143612_c0_seq1.mrna1;geneID=comp143612_c0_seq1.path1;Name=comp143612_c0_seq1;Dir=antisensecoverage=93.4;identity=99.3;matches=1194;mismatches=9;indels=0;unknowns=0;Target=comp143612_c0_seq1 427 1158 .;locus=RLOC_00015871
Chr2	stalkie_big_nohaplotig	exon	28205363	28206196	99	+	.	Parent=comp143612_c0_seq1.mrna1;Target=comp143612_c0_seq1 411 1244 -
Chr2	stalkie_big_nohaplotig	exon	28206277	28206645	98	+	.	Parent=comp143612_c0_seq1.mrna1;Target=comp143612_c0_seq1 42 410 -
Chr2	stalkie_big_nohaplotig	CDS	28205449	28206180	.	+	0	Parent=comp143612_c0_seq1.mrna1
Chr2	gffcl	locus	28214801	28217350	.	+	.	ID=RLOC_00015872;geneIDs=comp135882_c0_seq1.path1;transcripts=comp135882_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28214801	28217350	.	+	.	ID=comp135882_c0_seq1.mrna1;geneID=comp135882_c0_seq1.path1;Name=comp135882_c0_seq1;Dir=antisensecoverage=97.3;identity=98.4;matches=1579;mismatches=21;indels=5;unknowns=0;Target=comp135882_c0_seq1 864 1502 .;locus=RLOC_00015872
Chr2	stalkie_big_nohaplotig	exon	28214801	28215609	98	+	.	Parent=comp135882_c0_seq1.mrna1;Target=comp135882_c0_seq1 831 1639 -
Chr2	stalkie_big_nohaplotig	exon	28216354	28216534	98	+	.	Parent=comp135882_c0_seq1.mrna1;Target=comp135882_c0_seq1 650 830 -
Chr2	stalkie_big_nohaplotig	exon	28216607	28216694	97	+	.	Parent=comp135882_c0_seq1.mrna1;Target=comp135882_c0_seq1 562 649 -
Chr2	stalkie_big_nohaplotig	exon	28216771	28217070	98	+	.	Parent=comp135882_c0_seq1.mrna1;Target=comp135882_c0_seq1 266 561 -
Chr2	stalkie_big_nohaplotig	exon	28217125	28217350	96	+	.	Parent=comp135882_c0_seq1.mrna1;Target=comp135882_c0_seq1 39 265 -
Chr2	stalkie_big_nohaplotig	CDS	28214938	28215576	.	+	0	Parent=comp135882_c0_seq1.mrna1
Chr2	gffcl	locus	28221230	28225649	.	-	.	ID=RLOC_00015873;geneIDs=FBgn0019637.2.path1;transcripts=FBgn0019637.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28221230	28225649	.	-	.	ID=FBgn0019637.2.mrna1;geneID=FBgn0019637.2.path1;Name=FBgn0019637.2;Dir=sensecoverage=100.0;identity=99.2;matches=2480;mismatches=19;indels=0;unknowns=0;locus=RLOC_00015873
Chr2	stalkie_big_nohaplotig	exon	28221230	28221760	100	-	.	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 1969 2499 +
Chr2	stalkie_big_nohaplotig	exon	28221826	28222332	99	-	.	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 1462 1968 +
Chr2	stalkie_big_nohaplotig	exon	28222407	28222435	100	-	.	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 1433 1461 +
Chr2	stalkie_big_nohaplotig	exon	28222508	28222658	100	-	.	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 1282 1432 +
Chr2	stalkie_big_nohaplotig	exon	28222727	28222773	100	-	.	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 1235 1281 +
Chr2	stalkie_big_nohaplotig	exon	28222836	28223160	100	-	.	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 910 1234 +
Chr2	stalkie_big_nohaplotig	exon	28223222	28223250	96	-	.	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 881 909 +
Chr2	stalkie_big_nohaplotig	exon	28223331	28223373	100	-	.	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 838 880 +
Chr2	stalkie_big_nohaplotig	exon	28223725	28223753	100	-	.	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 809 837 +
Chr2	stalkie_big_nohaplotig	exon	28223813	28223903	97	-	.	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 718 808 +
Chr2	stalkie_big_nohaplotig	exon	28223977	28224005	100	-	.	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 689 717 +
Chr2	stalkie_big_nohaplotig	exon	28224069	28224174	98	-	.	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 583 688 +
Chr2	stalkie_big_nohaplotig	exon	28224248	28224276	100	-	.	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 554 582 +
Chr2	stalkie_big_nohaplotig	exon	28224339	28224480	98	-	.	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 412 553 +
Chr2	stalkie_big_nohaplotig	exon	28224973	28225188	97	-	.	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 196 411 +
Chr2	stalkie_big_nohaplotig	exon	28225257	28225285	93	-	.	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 167 195 +
Chr2	stalkie_big_nohaplotig	exon	28225354	28225398	95	-	.	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 122 166 +
Chr2	stalkie_big_nohaplotig	exon	28225464	28225508	97	-	.	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 77 121 +
Chr2	stalkie_big_nohaplotig	exon	28225574	28225649	98	-	.	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 1 76 +
Chr2	stalkie_big_nohaplotig	CDS	28221230	28221760	.	-	0	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 1969 2499 +
Chr2	stalkie_big_nohaplotig	CDS	28221826	28222332	.	-	0	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 1462 1968 +
Chr2	stalkie_big_nohaplotig	CDS	28222407	28222435	.	-	2	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 1433 1461 +
Chr2	stalkie_big_nohaplotig	CDS	28222508	28222658	.	-	0	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 1282 1432 +
Chr2	stalkie_big_nohaplotig	CDS	28222727	28222773	.	-	2	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 1235 1281 +
Chr2	stalkie_big_nohaplotig	CDS	28222836	28223160	.	-	0	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 910 1234 +
Chr2	stalkie_big_nohaplotig	CDS	28223222	28223250	.	-	2	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 881 909 +
Chr2	stalkie_big_nohaplotig	CDS	28223331	28223373	.	-	0	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 838 880 +
Chr2	stalkie_big_nohaplotig	CDS	28223725	28223753	.	-	2	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 809 837 +
Chr2	stalkie_big_nohaplotig	CDS	28223813	28223903	.	-	0	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 718 808 +
Chr2	stalkie_big_nohaplotig	CDS	28223977	28224005	.	-	2	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 689 717 +
Chr2	stalkie_big_nohaplotig	CDS	28224069	28224174	.	-	0	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 583 688 +
Chr2	stalkie_big_nohaplotig	CDS	28224248	28224276	.	-	2	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 554 582 +
Chr2	stalkie_big_nohaplotig	CDS	28224339	28224480	.	-	0	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 412 553 +
Chr2	stalkie_big_nohaplotig	CDS	28224973	28225188	.	-	0	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 196 411 +
Chr2	stalkie_big_nohaplotig	CDS	28225257	28225285	.	-	2	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 167 195 +
Chr2	stalkie_big_nohaplotig	CDS	28225354	28225398	.	-	2	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 122 166 +
Chr2	stalkie_big_nohaplotig	CDS	28225464	28225508	.	-	2	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 77 121 +
Chr2	stalkie_big_nohaplotig	CDS	28225574	28225649	.	-	0	Parent=FBgn0019637.2.mrna1;Target=FBgn0019637.2 1 76 +
Chr2	gffcl	locus	28231109	28231881	.	-	.	ID=RLOC_00015874;geneIDs=comp146194_c1_seq1.path1;transcripts=comp146194_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28231109	28231881	.	-	.	ID=comp146194_c1_seq1.mrna1;geneID=comp146194_c1_seq1.path1;Name=comp146194_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=762;mismatches=11;indels=4;unknowns=0;Target=comp146194_c1_seq1 777 1 .;CDS_Target=comp146194_c1_seq1 775 692 .;locus=RLOC_00015874
Chr2	stalkie_big_nohaplotig	exon	28231109	28231881	98	-	.	Parent=comp146194_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28231111	28231194	.	-	0	Parent=comp146194_c1_seq1.mrna1
Chr2	gffcl	locus	28240435	28241611	.	-	.	ID=RLOC_00015875;geneIDs=comp153871_c2_seq1.path1;transcripts=comp153871_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28240435	28241611	.	-	.	ID=comp153871_c2_seq1.mrna1;geneID=comp153871_c2_seq1.path1;Name=comp153871_c2_seq1;Dir=antisensecoverage=95.8;identity=98.7;matches=1100;mismatches=14;indels=1;unknowns=0;locus=RLOC_00015875
Chr2	stalkie_big_nohaplotig	exon	28240435	28240949	98	-	.	Parent=comp153871_c2_seq1.mrna1;Target=comp153871_c2_seq1 50 564 -
Chr2	stalkie_big_nohaplotig	exon	28241012	28241611	98	-	.	Parent=comp153871_c2_seq1.mrna1;Target=comp153871_c2_seq1 565 1163 -
Chr2	stalkie_big_nohaplotig	CDS	28240920	28240949	.	-	2	Parent=comp153871_c2_seq1.mrna1;Target=comp153871_c2_seq1 535 564 .
Chr2	stalkie_big_nohaplotig	CDS	28241012	28241249	.	-	0	Parent=comp153871_c2_seq1.mrna1;Target=comp153871_c2_seq1 565 801 .
Chr2	gffcl	locus	28290874	28292326	.	+	.	ID=RLOC_00015876;geneIDs=FBgn0261396.2.path1;transcripts=FBgn0261396.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28290874	28292326	.	+	.	ID=FBgn0261396.2.mrna1;geneID=FBgn0261396.2.path1;Name=FBgn0261396.2;Dir=indeterminatecoverage=99.9;identity=99.1;matches=1440;mismatches=13;indels=0;unknowns=0;Target=FBgn0261396.2 1455 3 .;CDS_Target=FBgn0261396.2 1455 4 .;locus=RLOC_00015876
Chr2	stalkie_big_nohaplotig	exon	28290874	28292326	99	+	.	Parent=FBgn0261396.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28290875	28292326	.	+	0	Parent=FBgn0261396.2.mrna1
Chr2	gffcl	locus	28293270	28295913	.	-	.	ID=RLOC_00015877;geneIDs=ORF3177.path1,comp139447_c1_seq1.path1,comp152851_c0_seq1.path1;transcripts=comp152851_c0_seq1.mrna1,ORF3177.mrna1,comp139447_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28293270	28295913	.	-	.	ID=comp152851_c0_seq1.mrna1;geneID=comp152851_c0_seq1.path1;Name=comp152851_c0_seq1;Dir=antisensecoverage=97.8;identity=98.6;matches=1500;mismatches=21;indels=0;unknowns=0;Target=comp152851_c0_seq1 407 1084 .;locus=RLOC_00015877
Chr2	stalkie_big_nohaplotig	exon	28293270	28294367	98	-	.	Parent=comp152851_c0_seq1.mrna1;Target=comp152851_c0_seq1 19 1116 -
Chr2	stalkie_big_nohaplotig	exon	28294577	28294620	100	-	.	Parent=comp152851_c0_seq1.mrna1;Target=comp152851_c0_seq1 1117 1160 -
Chr2	stalkie_big_nohaplotig	exon	28295483	28295544	96	-	.	Parent=comp152851_c0_seq1.mrna1;Target=comp152851_c0_seq1 1161 1222 -
Chr2	stalkie_big_nohaplotig	exon	28295597	28295913	97	-	.	Parent=comp152851_c0_seq1.mrna1;Target=comp152851_c0_seq1 1223 1539 -
Chr2	stalkie_big_nohaplotig	CDS	28293658	28294335	.	-	0	Parent=comp152851_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28293661	28294419	.	-	.	ID=ORF3177.mrna1;geneID=ORF3177.path1;Name=ORF3177;Dir=indeterminatecoverage=100.0;identity=99.7;matches=757;mismatches=2;indels=0;unknowns=0;Target=ORF3177 759 1 .;locus=RLOC_00015877
Chr2	stalkie_big_nohaplotig	exon	28293661	28294419	99	-	.	Parent=ORF3177.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28293661	28294419	.	-	0	Parent=ORF3177.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28294600	28294949	.	-	.	ID=comp139447_c1_seq1.mrna1;geneID=comp139447_c1_seq1.path1;Name=comp139447_c1_seq1;Dir=indeterminatecoverage=99.7;identity=94.6;matches=335;mismatches=15;indels=4;unknowns=0;Target=comp139447_c1_seq1 355 2 .;CDS_Target=comp139447_c1_seq1 202 2 .;locus=RLOC_00015877
Chr2	stalkie_big_nohaplotig	exon	28294600	28294949	94	-	.	Parent=comp139447_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28294749	28294949	.	-	0	Parent=comp139447_c1_seq1.mrna1
Chr2	gffcl	locus	28310483	28312584	.	-	.	ID=RLOC_00015878;geneIDs=FBgn0051106.4.path1;transcripts=FBgn0051106.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28310483	28312584	.	-	.	ID=FBgn0051106.4.mrna1;geneID=FBgn0051106.4.path1;Name=FBgn0051106.4;Dir=sensecoverage=100.0;identity=99.2;matches=1503;mismatches=12;indels=0;unknowns=0;locus=RLOC_00015878
Chr2	stalkie_big_nohaplotig	exon	28310483	28310514	100	-	.	Parent=FBgn0051106.4.mrna1;Target=FBgn0051106.4 1484 1515 +
Chr2	stalkie_big_nohaplotig	exon	28310566	28310693	99	-	.	Parent=FBgn0051106.4.mrna1;Target=FBgn0051106.4 1356 1483 +
Chr2	stalkie_big_nohaplotig	exon	28310763	28311040	98	-	.	Parent=FBgn0051106.4.mrna1;Target=FBgn0051106.4 1078 1355 +
Chr2	stalkie_big_nohaplotig	exon	28311098	28311248	99	-	.	Parent=FBgn0051106.4.mrna1;Target=FBgn0051106.4 927 1077 +
Chr2	stalkie_big_nohaplotig	exon	28311327	28311431	100	-	.	Parent=FBgn0051106.4.mrna1;Target=FBgn0051106.4 822 926 +
Chr2	stalkie_big_nohaplotig	exon	28311531	28311816	98	-	.	Parent=FBgn0051106.4.mrna1;Target=FBgn0051106.4 536 821 +
Chr2	stalkie_big_nohaplotig	exon	28311883	28312004	100	-	.	Parent=FBgn0051106.4.mrna1;Target=FBgn0051106.4 414 535 +
Chr2	stalkie_big_nohaplotig	exon	28312059	28312221	100	-	.	Parent=FBgn0051106.4.mrna1;Target=FBgn0051106.4 251 413 +
Chr2	stalkie_big_nohaplotig	exon	28312282	28312443	98	-	.	Parent=FBgn0051106.4.mrna1;Target=FBgn0051106.4 89 250 +
Chr2	stalkie_big_nohaplotig	exon	28312497	28312584	100	-	.	Parent=FBgn0051106.4.mrna1;Target=FBgn0051106.4 1 88 +
Chr2	stalkie_big_nohaplotig	CDS	28310483	28310514	.	-	2	Parent=FBgn0051106.4.mrna1;Target=FBgn0051106.4 1484 1515 +
Chr2	stalkie_big_nohaplotig	CDS	28310566	28310693	.	-	1	Parent=FBgn0051106.4.mrna1;Target=FBgn0051106.4 1356 1483 +
Chr2	stalkie_big_nohaplotig	CDS	28310763	28311040	.	-	0	Parent=FBgn0051106.4.mrna1;Target=FBgn0051106.4 1078 1355 +
Chr2	stalkie_big_nohaplotig	CDS	28311098	28311248	.	-	1	Parent=FBgn0051106.4.mrna1;Target=FBgn0051106.4 927 1077 +
Chr2	stalkie_big_nohaplotig	CDS	28311327	28311431	.	-	1	Parent=FBgn0051106.4.mrna1;Target=FBgn0051106.4 822 926 +
Chr2	stalkie_big_nohaplotig	CDS	28311531	28311816	.	-	2	Parent=FBgn0051106.4.mrna1;Target=FBgn0051106.4 536 821 +
Chr2	stalkie_big_nohaplotig	CDS	28311883	28312004	.	-	1	Parent=FBgn0051106.4.mrna1;Target=FBgn0051106.4 414 535 +
Chr2	stalkie_big_nohaplotig	CDS	28312059	28312221	.	-	2	Parent=FBgn0051106.4.mrna1;Target=FBgn0051106.4 251 413 +
Chr2	stalkie_big_nohaplotig	CDS	28312282	28312443	.	-	2	Parent=FBgn0051106.4.mrna1;Target=FBgn0051106.4 89 250 +
Chr2	stalkie_big_nohaplotig	CDS	28312497	28312584	.	-	0	Parent=FBgn0051106.4.mrna1;Target=FBgn0051106.4 1 88 +
Chr2	gffcl	locus	28314584	28317315	.	-	.	ID=RLOC_00015879;geneIDs=FBgn0051106.1.path1;transcripts=FBgn0051106.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28314584	28317315	.	-	.	ID=FBgn0051106.1.mrna1;geneID=FBgn0051106.1.path1;Name=FBgn0051106.1;Dir=sensecoverage=100.0;identity=99.5;matches=1483;mismatches=8;indels=0;unknowns=0;locus=RLOC_00015879
Chr2	stalkie_big_nohaplotig	exon	28314584	28314615	100	-	.	Parent=FBgn0051106.1.mrna1;Target=FBgn0051106.1 1460 1491 +
Chr2	stalkie_big_nohaplotig	exon	28314669	28314796	99	-	.	Parent=FBgn0051106.1.mrna1;Target=FBgn0051106.1 1332 1459 +
Chr2	stalkie_big_nohaplotig	exon	28314922	28315199	100	-	.	Parent=FBgn0051106.1.mrna1;Target=FBgn0051106.1 1054 1331 +
Chr2	stalkie_big_nohaplotig	exon	28315269	28315404	100	-	.	Parent=FBgn0051106.1.mrna1;Target=FBgn0051106.1 918 1053 +
Chr2	stalkie_big_nohaplotig	exon	28316060	28316167	100	-	.	Parent=FBgn0051106.1.mrna1;Target=FBgn0051106.1 810 917 +
Chr2	stalkie_big_nohaplotig	exon	28316252	28316540	99	-	.	Parent=FBgn0051106.1.mrna1;Target=FBgn0051106.1 521 809 +
Chr2	stalkie_big_nohaplotig	exon	28316608	28316729	99	-	.	Parent=FBgn0051106.1.mrna1;Target=FBgn0051106.1 399 520 +
Chr2	stalkie_big_nohaplotig	exon	28316790	28316952	98	-	.	Parent=FBgn0051106.1.mrna1;Target=FBgn0051106.1 236 398 +
Chr2	stalkie_big_nohaplotig	exon	28317021	28317182	98	-	.	Parent=FBgn0051106.1.mrna1;Target=FBgn0051106.1 74 235 +
Chr2	stalkie_big_nohaplotig	exon	28317243	28317315	98	-	.	Parent=FBgn0051106.1.mrna1;Target=FBgn0051106.1 1 73 +
Chr2	stalkie_big_nohaplotig	CDS	28314584	28314615	.	-	2	Parent=FBgn0051106.1.mrna1;Target=FBgn0051106.1 1460 1491 +
Chr2	stalkie_big_nohaplotig	CDS	28314669	28314796	.	-	1	Parent=FBgn0051106.1.mrna1;Target=FBgn0051106.1 1332 1459 +
Chr2	stalkie_big_nohaplotig	CDS	28314922	28315199	.	-	0	Parent=FBgn0051106.1.mrna1;Target=FBgn0051106.1 1054 1331 +
Chr2	stalkie_big_nohaplotig	CDS	28315269	28315404	.	-	1	Parent=FBgn0051106.1.mrna1;Target=FBgn0051106.1 918 1053 +
Chr2	stalkie_big_nohaplotig	CDS	28316060	28316167	.	-	1	Parent=FBgn0051106.1.mrna1;Target=FBgn0051106.1 810 917 +
Chr2	stalkie_big_nohaplotig	CDS	28316252	28316540	.	-	2	Parent=FBgn0051106.1.mrna1;Target=FBgn0051106.1 521 809 +
Chr2	stalkie_big_nohaplotig	CDS	28316608	28316729	.	-	1	Parent=FBgn0051106.1.mrna1;Target=FBgn0051106.1 399 520 +
Chr2	stalkie_big_nohaplotig	CDS	28316790	28316952	.	-	2	Parent=FBgn0051106.1.mrna1;Target=FBgn0051106.1 236 398 +
Chr2	stalkie_big_nohaplotig	CDS	28317021	28317182	.	-	2	Parent=FBgn0051106.1.mrna1;Target=FBgn0051106.1 74 235 +
Chr2	stalkie_big_nohaplotig	CDS	28317243	28317315	.	-	0	Parent=FBgn0051106.1.mrna1;Target=FBgn0051106.1 1 73 +
Chr2	gffcl	locus	28348149	28349537	.	+	.	ID=RLOC_00015880;geneIDs=FBgn0004364.path1,comp163421_c0_seq1.path1;transcripts=FBgn0004364.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28348150	28349537	.	+	.	ID=FBgn0004364.mrna1;geneID=FBgn0004364.path1;Name=FBgn0004364;Dir=indeterminatecoverage=99.9;identity=99.7;matches=1383;mismatches=4;indels=0;unknowns=1;Target=FBgn0004364 1388 1 .;CDS_Target=FBgn0004364 1386 1 .;locus=RLOC_00015880
Chr2	stalkie_big_nohaplotig	exon	28348150	28349537	99	+	.	Parent=FBgn0004364.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28348150	28349535	.	+	0	Parent=FBgn0004364.mrna1
Chr2	gffcl	locus	28351678	28352016	.	-	.	ID=RLOC_00015881;geneIDs=comp115947_c0_seq1.path1;transcripts=comp115947_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28351678	28352016	.	-	.	ID=comp115947_c0_seq1.mrna1;geneID=comp115947_c0_seq1.path1;Name=comp115947_c0_seq1;Dir=indeterminatecoverage=96.3;identity=99.7;matches=338;mismatches=1;indels=0;unknowns=0;Target=comp115947_c0_seq1 352 14 .;CDS_Target=comp115947_c0_seq1 65 15 .;locus=RLOC_00015881
Chr2	stalkie_big_nohaplotig	exon	28351678	28352016	99	-	.	Parent=comp115947_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28351965	28352015	.	-	0	Parent=comp115947_c0_seq1.mrna1
Chr2	gffcl	locus	28368300	28465579	.	-	.	ID=RLOC_00015882;geneIDs=comp163158_c0_seq1.path1;transcripts=comp163158_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28368300	28465579	.	-	.	ID=comp163158_c0_seq1.mrna1;geneID=comp163158_c0_seq1.path1;Name=comp163158_c0_seq1;Dir=sensecoverage=72.5;identity=87.5;matches=1328;mismatches=128;indels=62;unknowns=0;Target=comp163158_c0_seq1 1673 1714 +;locus=RLOC_00015882
Chr2	stalkie_big_nohaplotig	exon	28368300	28368468	96	-	.	Parent=comp163158_c0_seq1.mrna1;Target=comp163158_c0_seq1 2661 2829 +
Chr2	stalkie_big_nohaplotig	exon	28368493	28368595	96	-	.	Parent=comp163158_c0_seq1.mrna1;Target=comp163158_c0_seq1 2558 2659 +
Chr2	stalkie_big_nohaplotig	exon	28368747	28368768	100	-	.	Parent=comp163158_c0_seq1.mrna1;Target=comp163158_c0_seq1 2471 2492 +
Chr2	stalkie_big_nohaplotig	exon	28368838	28369166	85	-	.	Parent=comp163158_c0_seq1.mrna1;Target=comp163158_c0_seq1 2107 2431 +
Chr2	stalkie_big_nohaplotig	exon	28369280	28369937	91	-	.	Parent=comp163158_c0_seq1.mrna1;Target=comp163158_c0_seq1 1416 2067 +
Chr2	stalkie_big_nohaplotig	exon	28370407	28370419	76	-	.	Parent=comp163158_c0_seq1.mrna1;Target=comp163158_c0_seq1 1403 1415 +
Chr2	stalkie_big_nohaplotig	exon	28374029	28374032	100	-	.	Parent=comp163158_c0_seq1.mrna1;Target=comp163158_c0_seq1 1399 1402 +
Chr2	stalkie_big_nohaplotig	exon	28375833	28375839	100	-	.	Parent=comp163158_c0_seq1.mrna1;Target=comp163158_c0_seq1 1392 1398 +
Chr2	stalkie_big_nohaplotig	exon	28383177	28383185	100	-	.	Parent=comp163158_c0_seq1.mrna1;Target=comp163158_c0_seq1 1354 1362 +
Chr2	stalkie_big_nohaplotig	exon	28397964	28397984	76	-	.	Parent=comp163158_c0_seq1.mrna1;Target=comp163158_c0_seq1 1125 1144 +
Chr2	stalkie_big_nohaplotig	exon	28407464	28407489	33	-	.	Parent=comp163158_c0_seq1.mrna1;Target=comp163158_c0_seq1 1068 1124 +
Chr2	stalkie_big_nohaplotig	exon	28423705	28423714	100	-	.	Parent=comp163158_c0_seq1.mrna1;Target=comp163158_c0_seq1 943 952 +
Chr2	stalkie_big_nohaplotig	exon	28424095	28424137	51	-	.	Parent=comp163158_c0_seq1.mrna1;Target=comp163158_c0_seq1 885 942 +
Chr2	stalkie_big_nohaplotig	exon	28427063	28427066	100	-	.	Parent=comp163158_c0_seq1.mrna1;Target=comp163158_c0_seq1 881 884 +
Chr2	stalkie_big_nohaplotig	exon	28431090	28431093	50	-	.	Parent=comp163158_c0_seq1.mrna1;Target=comp163158_c0_seq1 859 860 +
Chr2	stalkie_big_nohaplotig	exon	28447281	28447289	100	-	.	Parent=comp163158_c0_seq1.mrna1;Target=comp163158_c0_seq1 813 821 +
Chr2	stalkie_big_nohaplotig	exon	28454305	28454314	90	-	.	Parent=comp163158_c0_seq1.mrna1;Target=comp163158_c0_seq1 803 812 +
Chr2	stalkie_big_nohaplotig	exon	28456000	28456011	100	-	.	Parent=comp163158_c0_seq1.mrna1;Target=comp163158_c0_seq1 791 802 +
Chr2	stalkie_big_nohaplotig	exon	28462704	28462705	50	-	.	Parent=comp163158_c0_seq1.mrna1;Target=comp163158_c0_seq1 789 790 +
Chr2	stalkie_big_nohaplotig	exon	28465569	28465579	90	-	.	Parent=comp163158_c0_seq1.mrna1;Target=comp163158_c0_seq1 778 788 +
Chr2	stalkie_big_nohaplotig	CDS	28369639	28369680	.	-	0	Parent=comp163158_c0_seq1.mrna1
Chr2	gffcl	locus	28395171	28396190	.	-	.	ID=RLOC_00015883;geneIDs=ORF1702.path1;transcripts=ORF1702.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28395171	28396190	.	-	.	ID=ORF1702.mrna1;geneID=ORF1702.path1;Name=ORF1702;Dir=indeterminatecoverage=100.0;identity=97.5;matches=995;mismatches=25;indels=0;unknowns=0;Target=ORF1702 1020 1 .;locus=RLOC_00015883
Chr2	stalkie_big_nohaplotig	exon	28395171	28396190	97	-	.	Parent=ORF1702.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28395171	28396190	.	-	0	Parent=ORF1702.mrna1
Chr2	gffcl	locus	28507356	28512087	.	+	.	ID=RLOC_00015885;geneIDs=ORF2721.path1,comp151295_c0_seq1.path1;transcripts=ORF2721.mrna1,comp151295_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28507356	28509566	.	+	.	ID=ORF2721.mrna1;geneID=ORF2721.path1;Name=ORF2721;Dir=sensecoverage=100.0;identity=99.6;matches=813;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015885
Chr2	stalkie_big_nohaplotig	exon	28507356	28507429	98	+	.	Parent=ORF2721.mrna1;Target=ORF2721 1 74 +
Chr2	stalkie_big_nohaplotig	exon	28508769	28509121	100	+	.	Parent=ORF2721.mrna1;Target=ORF2721 75 427 +
Chr2	stalkie_big_nohaplotig	exon	28509178	28509566	99	+	.	Parent=ORF2721.mrna1;Target=ORF2721 428 816 +
Chr2	stalkie_big_nohaplotig	CDS	28507356	28507429	.	+	0	Parent=ORF2721.mrna1;Target=ORF2721 1 74 +
Chr2	stalkie_big_nohaplotig	CDS	28508769	28509121	.	+	1	Parent=ORF2721.mrna1;Target=ORF2721 75 427 +
Chr2	stalkie_big_nohaplotig	CDS	28509178	28509566	.	+	2	Parent=ORF2721.mrna1;Target=ORF2721 428 816 +
Chr2	stalkie_big_nohaplotig	mRNA	28507900	28512087	.	+	.	ID=comp151295_c0_seq1.mrna1;geneID=comp151295_c0_seq1.path1;Name=comp151295_c0_seq1;Dir=sensecoverage=99.2;identity=99.1;matches=1028;mismatches=9;indels=0;unknowns=0;locus=RLOC_00015885
Chr2	stalkie_big_nohaplotig	exon	28507900	28508014	94	+	.	Parent=comp151295_c0_seq1.mrna1;Target=comp151295_c0_seq1 8 122 +
Chr2	stalkie_big_nohaplotig	exon	28508769	28508973	99	+	.	Parent=comp151295_c0_seq1.mrna1;Target=comp151295_c0_seq1 123 327 +
Chr2	stalkie_big_nohaplotig	exon	28511314	28511458	100	+	.	Parent=comp151295_c0_seq1.mrna1;Target=comp151295_c0_seq1 328 472 +
Chr2	stalkie_big_nohaplotig	exon	28511516	28512087	99	+	.	Parent=comp151295_c0_seq1.mrna1;Target=comp151295_c0_seq1 473 1044 +
Chr2	stalkie_big_nohaplotig	CDS	28508794	28508973	.	+	0	Parent=comp151295_c0_seq1.mrna1;Target=comp151295_c0_seq1 148 327 +
Chr2	stalkie_big_nohaplotig	CDS	28511314	28511458	.	+	0	Parent=comp151295_c0_seq1.mrna1;Target=comp151295_c0_seq1 328 472 +
Chr2	stalkie_big_nohaplotig	CDS	28511516	28511898	.	+	2	Parent=comp151295_c0_seq1.mrna1;Target=comp151295_c0_seq1 473 855 +
Chr2	gffcl	locus	28587309	28587952	.	-	.	ID=RLOC_00015886;geneIDs=comp151930_c0_seq1.path1;transcripts=comp151930_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28587309	28587952	.	-	.	ID=comp151930_c0_seq1.mrna1;geneID=comp151930_c0_seq1.path1;Name=comp151930_c0_seq1;Dir=indeterminatecoverage=95.3;identity=95.3;matches=614;mismatches=19;indels=11;unknowns=0;Target=comp151930_c0_seq1 662 30 .;CDS_Target=comp151930_c0_seq1 342 154 .;locus=RLOC_00015886
Chr2	stalkie_big_nohaplotig	exon	28587309	28587952	95	-	.	Parent=comp151930_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28587640	28587828	.	-	0	Parent=comp151930_c0_seq1.mrna1
Chr2	gffcl	locus	28599704	28600264	.	-	.	ID=RLOC_00015887;geneIDs=comp156469_c0_seq1.path1;transcripts=comp156469_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28599704	28600264	.	-	.	ID=comp156469_c0_seq1.mrna1;geneID=comp156469_c0_seq1.path1;Name=comp156469_c0_seq1;Dir=sensecoverage=91.0;identity=97.5;matches=476;mismatches=12;indels=0;unknowns=0;locus=RLOC_00015887
Chr2	stalkie_big_nohaplotig	exon	28599704	28600073	98	-	.	Parent=comp156469_c0_seq1.mrna1;Target=comp156469_c0_seq1 145 514 +
Chr2	stalkie_big_nohaplotig	exon	28600147	28600264	94	-	.	Parent=comp156469_c0_seq1.mrna1;Target=comp156469_c0_seq1 27 144 +
Chr2	stalkie_big_nohaplotig	CDS	28599822	28600073	.	-	0	Parent=comp156469_c0_seq1.mrna1;Target=comp156469_c0_seq1 145 396 +
Chr2	stalkie_big_nohaplotig	CDS	28600147	28600263	.	-	0	Parent=comp156469_c0_seq1.mrna1;Target=comp156469_c0_seq1 28 144 +
Chr2	gffcl	locus	28607582	28608279	.	-	.	ID=RLOC_00015888;geneIDs=comp137729_c1_seq1.path1;transcripts=comp137729_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28607582	28608279	.	-	.	ID=comp137729_c1_seq1.mrna1;geneID=comp137729_c1_seq1.path1;Name=comp137729_c1_seq1;Dir=antisensecoverage=100.0;identity=86.4;matches=539;mismatches=43;indels=42;unknowns=0;Target=comp137729_c1_seq1 119 277 .;locus=RLOC_00015888
Chr2	stalkie_big_nohaplotig	exon	28607582	28607898	81	-	.	Parent=comp137729_c1_seq1.mrna1;Target=comp137729_c1_seq1 1 295 -
Chr2	stalkie_big_nohaplotig	exon	28607986	28608279	91	-	.	Parent=comp137729_c1_seq1.mrna1;Target=comp137729_c1_seq1 296 595 -
Chr2	stalkie_big_nohaplotig	CDS	28607697	28607880	.	-	0	Parent=comp137729_c1_seq1.mrna1
Chr2	gffcl	locus	28610368	28610684	.	-	.	ID=RLOC_00015889;geneIDs=comp156094_c0_seq1.path1;transcripts=comp156094_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28610368	28610684	.	-	.	ID=comp156094_c0_seq1.mrna1;geneID=comp156094_c0_seq1.path1;Name=comp156094_c0_seq1;Dir=indeterminatecoverage=55.2;identity=98.4;matches=312;mismatches=5;indels=0;unknowns=0;Target=comp156094_c0_seq1 574 258 .;CDS_Target=comp156094_c0_seq1 365 258 .;locus=RLOC_00015889
Chr2	stalkie_big_nohaplotig	exon	28610368	28610684	98	-	.	Parent=comp156094_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28610577	28610684	.	-	0	Parent=comp156094_c0_seq1.mrna1
Chr2	gffcl	locus	28612026	28613349	.	+	.	ID=RLOC_00015890;geneIDs=comp160623_c0_seq1.path1;transcripts=comp160623_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28612026	28613349	.	+	.	ID=comp160623_c0_seq1.mrna1;geneID=comp160623_c0_seq1.path1;Name=comp160623_c0_seq1;Dir=indeterminatecoverage=85.4;identity=88.4;matches=1085;mismatches=32;indels=111;unknowns=0;Target=comp160623_c0_seq1 1407 1306 .;locus=RLOC_00015890
Chr2	stalkie_big_nohaplotig	exon	28612026	28612432	77	+	.	Parent=comp160623_c0_seq1.mrna1;Target=comp160623_c0_seq1 711 210 .
Chr2	stalkie_big_nohaplotig	exon	28612630	28613349	95	+	.	Parent=comp160623_c0_seq1.mrna1;Target=comp160623_c0_seq1 1427 712 .
Chr2	stalkie_big_nohaplotig	CDS	28613228	28613329	.	+	0	Parent=comp160623_c0_seq1.mrna1
Chr2	gffcl	locus	28614209	28614528	.	+	.	ID=RLOC_00015891;geneIDs=comp154080_c0_seq1.path1;transcripts=comp154080_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28614209	28614528	.	+	.	ID=comp154080_c0_seq1.mrna1;geneID=comp154080_c0_seq1.path1;Name=comp154080_c0_seq1;Dir=indeterminatecoverage=93.3;identity=98.1;matches=316;mismatches=4;indels=2;unknowns=0;Target=comp154080_c0_seq1 345 24 .;CDS_Target=comp154080_c0_seq1 130 26 .;locus=RLOC_00015891
Chr2	stalkie_big_nohaplotig	exon	28614209	28614528	98	+	.	Parent=comp154080_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28614211	28614315	.	+	0	Parent=comp154080_c0_seq1.mrna1
Chr2	gffcl	locus	28617432	28617776	.	-	.	ID=RLOC_00015892;geneIDs=comp111024_c0_seq1.path1;transcripts=comp111024_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28617432	28617776	.	-	.	ID=comp111024_c0_seq1.mrna1;geneID=comp111024_c0_seq1.path1;Name=comp111024_c0_seq1;Dir=indeterminatecoverage=91.3;identity=97.7;matches=337;mismatches=8;indels=0;unknowns=0;Target=comp111024_c0_seq1 345 1 .;CDS_Target=comp111024_c0_seq1 343 194 .;locus=RLOC_00015892
Chr2	stalkie_big_nohaplotig	exon	28617432	28617776	97	-	.	Parent=comp111024_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28617434	28617583	.	-	0	Parent=comp111024_c0_seq1.mrna1
Chr2	gffcl	locus	28617968	28618961	.	-	.	ID=RLOC_00015893;geneIDs=comp158012_c0_seq1.path1;transcripts=comp158012_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28617968	28618961	.	-	.	ID=comp158012_c0_seq1.mrna1;geneID=comp158012_c0_seq1.path1;Name=comp158012_c0_seq1;Dir=indeterminatecoverage=97.6;identity=99.1;matches=986;mismatches=7;indels=2;unknowns=0;Target=comp158012_c0_seq1 1018 25 .;CDS_Target=comp158012_c0_seq1 350 216 .;locus=RLOC_00015893
Chr2	stalkie_big_nohaplotig	exon	28617968	28618961	99	-	.	Parent=comp158012_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28618636	28618770	.	-	0	Parent=comp158012_c0_seq1.mrna1
Chr2	gffcl	locus	28619688	28620282	.	+	.	ID=RLOC_00015894;geneIDs=comp156685_c0_seq1.path1;transcripts=comp156685_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28619688	28620282	.	+	.	ID=comp156685_c0_seq1.mrna1;geneID=comp156685_c0_seq1.path1;Name=comp156685_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.3;matches=576;mismatches=19;indels=3;unknowns=0;Target=comp156685_c0_seq1 598 1 .;CDS_Target=comp156685_c0_seq1 280 143 .;locus=RLOC_00015894
Chr2	stalkie_big_nohaplotig	exon	28619688	28620282	96	+	.	Parent=comp156685_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28619829	28619966	.	+	0	Parent=comp156685_c0_seq1.mrna1
Chr2	gffcl	locus	28620389	28621747	.	+	.	ID=RLOC_00015895;geneIDs=comp160441_c0_seq1.path1;transcripts=comp160441_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28620389	28621747	.	+	.	ID=comp160441_c0_seq1.mrna1;geneID=comp160441_c0_seq1.path1;Name=comp160441_c0_seq1;Dir=indeterminatecoverage=99.2;identity=91.5;matches=1299;mismatches=58;indels=62;unknowns=0;Target=comp160441_c0_seq1 1417 1 .;CDS_Target=comp160441_c0_seq1 559 470 .;locus=RLOC_00015895
Chr2	stalkie_big_nohaplotig	exon	28620389	28621747	91	+	.	Parent=comp160441_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28620836	28620909	.	+	0	Parent=comp160441_c0_seq1.mrna1
Chr2	gffcl	locus	28622263	28623247	.	+	.	ID=RLOC_00015896;geneIDs=comp162182_c0_seq1.path1;transcripts=comp162182_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28622263	28623247	.	+	.	ID=comp162182_c0_seq1.mrna1;geneID=comp162182_c0_seq1.path1;Name=comp162182_c0_seq1;Dir=indeterminatecoverage=72.6;identity=97.6;matches=965;mismatches=20;indels=4;unknowns=0;Target=comp162182_c0_seq1 1332 344 .;CDS_Target=comp162182_c0_seq1 472 380 .;locus=RLOC_00015896
Chr2	stalkie_big_nohaplotig	exon	28622263	28623247	97	+	.	Parent=comp162182_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28622297	28622388	.	+	0	Parent=comp162182_c0_seq1.mrna1
Chr2	gffcl	locus	28630254	28645098	.	-	.	ID=RLOC_00015897;geneIDs=FBgn0260499.1.path1;transcripts=FBgn0260499.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28630254	28645098	.	-	.	ID=FBgn0260499.1.mrna1;geneID=FBgn0260499.1.path1;Name=FBgn0260499.1;Dir=sensecoverage=100.0;identity=100.0;matches=639;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015897
Chr2	stalkie_big_nohaplotig	exon	28630254	28630558	100	-	.	Parent=FBgn0260499.1.mrna1;Target=FBgn0260499.1 335 639 +
Chr2	stalkie_big_nohaplotig	exon	28632805	28632951	100	-	.	Parent=FBgn0260499.1.mrna1;Target=FBgn0260499.1 188 334 +
Chr2	stalkie_big_nohaplotig	exon	28638741	28638797	100	-	.	Parent=FBgn0260499.1.mrna1;Target=FBgn0260499.1 131 187 +
Chr2	stalkie_big_nohaplotig	exon	28644898	28645010	100	-	.	Parent=FBgn0260499.1.mrna1;Target=FBgn0260499.1 18 130 +
Chr2	stalkie_big_nohaplotig	exon	28645082	28645098	100	-	.	Parent=FBgn0260499.1.mrna1;Target=FBgn0260499.1 1 17 +
Chr2	stalkie_big_nohaplotig	CDS	28630254	28630558	.	-	2	Parent=FBgn0260499.1.mrna1;Target=FBgn0260499.1 335 639 +
Chr2	stalkie_big_nohaplotig	CDS	28632805	28632951	.	-	2	Parent=FBgn0260499.1.mrna1;Target=FBgn0260499.1 188 334 +
Chr2	stalkie_big_nohaplotig	CDS	28638741	28638797	.	-	2	Parent=FBgn0260499.1.mrna1;Target=FBgn0260499.1 131 187 +
Chr2	stalkie_big_nohaplotig	CDS	28644898	28645010	.	-	1	Parent=FBgn0260499.1.mrna1;Target=FBgn0260499.1 18 130 +
Chr2	stalkie_big_nohaplotig	CDS	28645082	28645098	.	-	0	Parent=FBgn0260499.1.mrna1;Target=FBgn0260499.1 1 17 +
Chr2	gffcl	locus	28655813	28657247	.	+	.	ID=RLOC_00015898;geneIDs=FBgn0050420.1.path1;transcripts=FBgn0050420.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28655813	28657247	.	+	.	ID=FBgn0050420.1.mrna1;geneID=FBgn0050420.1.path1;Name=FBgn0050420.1;Dir=sensecoverage=100.0;identity=98.6;matches=1299;mismatches=18;indels=0;unknowns=0;locus=RLOC_00015898
Chr2	stalkie_big_nohaplotig	exon	28655813	28655957	97	+	.	Parent=FBgn0050420.1.mrna1;Target=FBgn0050420.1 1 145 +
Chr2	stalkie_big_nohaplotig	exon	28656011	28657030	98	+	.	Parent=FBgn0050420.1.mrna1;Target=FBgn0050420.1 146 1165 +
Chr2	stalkie_big_nohaplotig	exon	28657096	28657247	98	+	.	Parent=FBgn0050420.1.mrna1;Target=FBgn0050420.1 1166 1317 +
Chr2	stalkie_big_nohaplotig	CDS	28655813	28655957	.	+	0	Parent=FBgn0050420.1.mrna1;Target=FBgn0050420.1 1 145 +
Chr2	stalkie_big_nohaplotig	CDS	28656011	28657030	.	+	2	Parent=FBgn0050420.1.mrna1;Target=FBgn0050420.1 146 1165 +
Chr2	stalkie_big_nohaplotig	CDS	28657096	28657247	.	+	2	Parent=FBgn0050420.1.mrna1;Target=FBgn0050420.1 1166 1317 +
Chr2	gffcl	locus	28684590	28686954	.	-	.	ID=RLOC_00015901;geneIDs=FBgn0022936.1.path1;transcripts=FBgn0022936.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28684590	28686954	.	-	.	ID=FBgn0022936.1.mrna1;geneID=FBgn0022936.1.path1;Name=FBgn0022936.1;Dir=sensecoverage=100.0;identity=98.5;matches=981;mismatches=15;indels=0;unknowns=0;locus=RLOC_00015901
Chr2	stalkie_big_nohaplotig	exon	28684590	28684707	99	-	.	Parent=FBgn0022936.1.mrna1;Target=FBgn0022936.1 879 996 +
Chr2	stalkie_big_nohaplotig	exon	28684765	28684876	99	-	.	Parent=FBgn0022936.1.mrna1;Target=FBgn0022936.1 767 878 +
Chr2	stalkie_big_nohaplotig	exon	28686078	28686306	98	-	.	Parent=FBgn0022936.1.mrna1;Target=FBgn0022936.1 538 766 +
Chr2	stalkie_big_nohaplotig	exon	28686367	28686765	98	-	.	Parent=FBgn0022936.1.mrna1;Target=FBgn0022936.1 139 537 +
Chr2	stalkie_big_nohaplotig	exon	28686817	28686954	97	-	.	Parent=FBgn0022936.1.mrna1;Target=FBgn0022936.1 1 138 +
Chr2	stalkie_big_nohaplotig	CDS	28684590	28684707	.	-	1	Parent=FBgn0022936.1.mrna1;Target=FBgn0022936.1 879 996 +
Chr2	stalkie_big_nohaplotig	CDS	28684765	28684876	.	-	2	Parent=FBgn0022936.1.mrna1;Target=FBgn0022936.1 767 878 +
Chr2	stalkie_big_nohaplotig	CDS	28686078	28686306	.	-	0	Parent=FBgn0022936.1.mrna1;Target=FBgn0022936.1 538 766 +
Chr2	stalkie_big_nohaplotig	CDS	28686367	28686765	.	-	0	Parent=FBgn0022936.1.mrna1;Target=FBgn0022936.1 139 537 +
Chr2	stalkie_big_nohaplotig	CDS	28686817	28686954	.	-	0	Parent=FBgn0022936.1.mrna1;Target=FBgn0022936.1 1 138 +
Chr2	gffcl	locus	28689267	28690548	.	+	.	ID=RLOC_00015902;geneIDs=comp152119_c0_seq1.path1;transcripts=comp152119_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28689267	28690548	.	+	.	ID=comp152119_c0_seq1.mrna1;geneID=comp152119_c0_seq1.path1;Name=comp152119_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1279;mismatches=3;indels=5;unknowns=0;Target=comp152119_c0_seq1 1287 1 .;CDS_Target=comp152119_c0_seq1 1074 1039 .;locus=RLOC_00015902
Chr2	stalkie_big_nohaplotig	exon	28689267	28690548	99	+	.	Parent=comp152119_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28690304	28690337	.	+	0	Parent=comp152119_c0_seq1.mrna1
Chr2	gffcl	locus	28715391	28846392	.	+	.	ID=RLOC_00015903;geneIDs=comp145200_c1_seq1.path1;transcripts=comp145200_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28715391	28846392	.	+	.	ID=comp145200_c1_seq1.mrna1;geneID=comp145200_c1_seq1.path1;Name=comp145200_c1_seq1;Dir=sensecoverage=67.5;identity=85.9;matches=510;mismatches=59;indels=25;unknowns=0;Target=comp145200_c1_seq1 281 379 +;locus=RLOC_00015903
Chr2	stalkie_big_nohaplotig	exon	28715391	28715619	70	+	.	Parent=comp145200_c1_seq1.mrna1;Target=comp145200_c1_seq1 279 502 +
Chr2	stalkie_big_nohaplotig	exon	28846038	28846392	96	+	.	Parent=comp145200_c1_seq1.mrna1;Target=comp145200_c1_seq1 503 857 +
Chr2	stalkie_big_nohaplotig	CDS	28715393	28715484	.	+	0	Parent=comp145200_c1_seq1.mrna1
Chr2	gffcl	locus	28717437	28718197	.	-	.	ID=RLOC_00015904;geneIDs=FBgn0034860.1.path1;transcripts=FBgn0034860.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28717437	28718197	.	-	.	ID=FBgn0034860.1.mrna1;geneID=FBgn0034860.1.path1;Name=FBgn0034860.1;Dir=sensecoverage=33.8;identity=99.6;matches=224;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015904
Chr2	stalkie_big_nohaplotig	exon	28717437	28717568	99	-	.	Parent=FBgn0034860.1.mrna1;Target=FBgn0034860.1 94 225 +
Chr2	stalkie_big_nohaplotig	exon	28718105	28718197	100	-	.	Parent=FBgn0034860.1.mrna1;Target=FBgn0034860.1 1 93 +
Chr2	stalkie_big_nohaplotig	CDS	28717437	28717568	.	-	0	Parent=FBgn0034860.1.mrna1;Target=FBgn0034860.1 94 225 +
Chr2	stalkie_big_nohaplotig	CDS	28718105	28718197	.	-	0	Parent=FBgn0034860.1.mrna1;Target=FBgn0034860.1 1 93 +
Chr2	gffcl	locus	28733771	28734658	.	+	.	ID=RLOC_00015905;geneIDs=comp20029_c0_seq1.path1,comp139136_c0_seq1.path1;transcripts=comp20029_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28734131	28734658	.	+	.	ID=comp20029_c0_seq1.mrna1;geneID=comp20029_c0_seq1.path1;Name=comp20029_c0_seq1;Dir=indeterminatecoverage=95.3;identity=93.4;matches=441;mismatches=23;indels=8;unknowns=0;Target=comp20029_c0_seq1 151 23 .;locus=RLOC_00015905
Chr2	stalkie_big_nohaplotig	exon	28734131	28734531	93	+	.	Parent=comp20029_c0_seq1.mrna1;Target=comp20029_c0_seq1 431 23 .
Chr2	stalkie_big_nohaplotig	exon	28734596	28734658	95	+	.	Parent=comp20029_c0_seq1.mrna1;Target=comp20029_c0_seq1 514 452 .
Chr2	stalkie_big_nohaplotig	CDS	28734131	28734259	.	+	0	Parent=comp20029_c0_seq1.mrna1
Chr2	gffcl	locus	28745184	28752632	.	+	.	ID=RLOC_00015906;geneIDs=FBgn0034491.1.path1;transcripts=FBgn0034491.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28745184	28752632	.	+	.	ID=FBgn0034491.1.mrna1;geneID=FBgn0034491.1.path1;Name=FBgn0034491.1;Dir=sensecoverage=100.0;identity=99.4;matches=2835;mismatches=18;indels=0;unknowns=0;locus=RLOC_00015906
Chr2	stalkie_big_nohaplotig	exon	28745184	28745224	100	+	.	Parent=FBgn0034491.1.mrna1;Target=FBgn0034491.1 1 41 +
Chr2	stalkie_big_nohaplotig	exon	28747902	28749020	99	+	.	Parent=FBgn0034491.1.mrna1;Target=FBgn0034491.1 42 1160 +
Chr2	stalkie_big_nohaplotig	exon	28749096	28749918	99	+	.	Parent=FBgn0034491.1.mrna1;Target=FBgn0034491.1 1161 1983 +
Chr2	stalkie_big_nohaplotig	exon	28749978	28750649	99	+	.	Parent=FBgn0034491.1.mrna1;Target=FBgn0034491.1 1984 2655 +
Chr2	stalkie_big_nohaplotig	exon	28750726	28750851	100	+	.	Parent=FBgn0034491.1.mrna1;Target=FBgn0034491.1 2656 2781 +
Chr2	stalkie_big_nohaplotig	exon	28752561	28752632	97	+	.	Parent=FBgn0034491.1.mrna1;Target=FBgn0034491.1 2782 2853 +
Chr2	stalkie_big_nohaplotig	CDS	28745184	28745224	.	+	0	Parent=FBgn0034491.1.mrna1;Target=FBgn0034491.1 1 41 +
Chr2	stalkie_big_nohaplotig	CDS	28747902	28749020	.	+	1	Parent=FBgn0034491.1.mrna1;Target=FBgn0034491.1 42 1160 +
Chr2	stalkie_big_nohaplotig	CDS	28749096	28749918	.	+	1	Parent=FBgn0034491.1.mrna1;Target=FBgn0034491.1 1161 1983 +
Chr2	stalkie_big_nohaplotig	CDS	28749978	28750649	.	+	0	Parent=FBgn0034491.1.mrna1;Target=FBgn0034491.1 1984 2655 +
Chr2	stalkie_big_nohaplotig	CDS	28750726	28750851	.	+	0	Parent=FBgn0034491.1.mrna1;Target=FBgn0034491.1 2656 2781 +
Chr2	stalkie_big_nohaplotig	CDS	28752561	28752632	.	+	0	Parent=FBgn0034491.1.mrna1;Target=FBgn0034491.1 2782 2853 +
Chr2	gffcl	locus	28780830	28782891	.	+	.	ID=RLOC_00015907;geneIDs=FBgn0033312.1.path1;transcripts=FBgn0033312.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28780830	28782891	.	+	.	ID=FBgn0033312.1.mrna1;geneID=FBgn0033312.1.path1;Name=FBgn0033312.1;Dir=sensecoverage=55.2;identity=99.0;matches=507;mismatches=5;indels=0;unknowns=0;locus=RLOC_00015907
Chr2	stalkie_big_nohaplotig	exon	28780830	28780943	99	+	.	Parent=FBgn0033312.1.mrna1;Target=FBgn0033312.1 1 114 +
Chr2	stalkie_big_nohaplotig	exon	28781012	28781109	100	+	.	Parent=FBgn0033312.1.mrna1;Target=FBgn0033312.1 115 212 +
Chr2	stalkie_big_nohaplotig	exon	28782592	28782891	98	+	.	Parent=FBgn0033312.1.mrna1;Target=FBgn0033312.1 213 512 +
Chr2	stalkie_big_nohaplotig	CDS	28780830	28780943	.	+	0	Parent=FBgn0033312.1.mrna1;Target=FBgn0033312.1 1 114 +
Chr2	stalkie_big_nohaplotig	CDS	28781012	28781109	.	+	0	Parent=FBgn0033312.1.mrna1;Target=FBgn0033312.1 115 212 +
Chr2	stalkie_big_nohaplotig	CDS	28782592	28782889	.	+	1	Parent=FBgn0033312.1.mrna1;Target=FBgn0033312.1 213 510 +
Chr2	gffcl	locus	28819192	28821081	.	-	.	ID=RLOC_00015908;geneIDs=ORF403.path1;transcripts=ORF403.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28819192	28821081	.	-	.	ID=ORF403.mrna1;geneID=ORF403.path1;Name=ORF403;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1874;mismatches=16;indels=0;unknowns=0;Target=ORF403 1890 1 .;locus=RLOC_00015908
Chr2	stalkie_big_nohaplotig	exon	28819192	28821081	99	-	.	Parent=ORF403.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28819192	28821081	.	-	0	Parent=ORF403.mrna1
Chr2	gffcl	locus	28859526	28860460	.	+	.	ID=RLOC_00015909;geneIDs=comp150739_c1_seq1.path1;transcripts=comp150739_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28859526	28860460	.	+	.	ID=comp150739_c1_seq1.mrna1;geneID=comp150739_c1_seq1.path1;Name=comp150739_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=930;mismatches=5;indels=0;unknowns=0;Target=comp150739_c1_seq1 935 1 .;CDS_Target=comp150739_c1_seq1 310 119 .;locus=RLOC_00015909
Chr2	stalkie_big_nohaplotig	exon	28859526	28860460	99	+	.	Parent=comp150739_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28859644	28859835	.	+	0	Parent=comp150739_c1_seq1.mrna1
Chr2	gffcl	locus	28890902	28891546	.	+	.	ID=RLOC_00015910;geneIDs=FBgn0034383.1.path1;transcripts=FBgn0034383.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28890902	28891546	.	+	.	ID=FBgn0034383.1.mrna1;geneID=FBgn0034383.1.path1;Name=FBgn0034383.1;Dir=sensecoverage=100.0;identity=99.8;matches=590;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015910
Chr2	stalkie_big_nohaplotig	exon	28890902	28890913	100	+	.	Parent=FBgn0034383.1.mrna1;Target=FBgn0034383.1 1 12 +
Chr2	stalkie_big_nohaplotig	exon	28890968	28891546	99	+	.	Parent=FBgn0034383.1.mrna1;Target=FBgn0034383.1 13 591 +
Chr2	stalkie_big_nohaplotig	CDS	28890902	28890913	.	+	0	Parent=FBgn0034383.1.mrna1;Target=FBgn0034383.1 1 12 +
Chr2	stalkie_big_nohaplotig	CDS	28890968	28891546	.	+	0	Parent=FBgn0034383.1.mrna1;Target=FBgn0034383.1 13 591 +
Chr2	gffcl	locus	28906346	28907262	.	+	.	ID=RLOC_00015912;geneIDs=comp158169_c0_seq1.path1;transcripts=comp158169_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28906346	28907262	.	+	.	ID=comp158169_c0_seq1.mrna1;geneID=comp158169_c0_seq1.path1;Name=comp158169_c0_seq1;Dir=indeterminatecoverage=97.4;identity=93.3;matches=898;mismatches=19;indels=46;unknowns=0;Target=comp158169_c0_seq1 963 1 .;CDS_Target=comp158169_c0_seq1 785 648 .;locus=RLOC_00015912
Chr2	stalkie_big_nohaplotig	exon	28906346	28907262	93	+	.	Parent=comp158169_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28906947	28907084	.	+	0	Parent=comp158169_c0_seq1.mrna1
Chr2	gffcl	locus	28917094	28917499	.	-	.	ID=RLOC_00015913;geneIDs=FBgn0033312.1.path2;transcripts=FBgn0033312.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	28917094	28917499	.	-	.	ID=FBgn0033312.1.mrna2;geneID=FBgn0033312.1.path2;Name=FBgn0033312.1;Dir=sensecoverage=36.7;identity=98.5;matches=335;mismatches=5;indels=0;unknowns=0;locus=RLOC_00015913
Chr2	stalkie_big_nohaplotig	exon	28917094	28917205	97	-	.	Parent=FBgn0033312.1.mrna2;Target=FBgn0033312.1 816 927 +
Chr2	stalkie_big_nohaplotig	exon	28917272	28917499	99	-	.	Parent=FBgn0033312.1.mrna2;Target=FBgn0033312.1 588 815 +
Chr2	stalkie_big_nohaplotig	CDS	28917094	28917205	.	-	1	Parent=FBgn0033312.1.mrna2;Target=FBgn0033312.1 816 927 +
Chr2	stalkie_big_nohaplotig	CDS	28917272	28917498	.	-	0	Parent=FBgn0033312.1.mrna2;Target=FBgn0033312.1 589 815 +
Chr2	gffcl	locus	28926853	29061818	.	-	.	ID=RLOC_00015914;geneIDs=comp146527_c0_seq1.path1;transcripts=comp146527_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28926853	29061818	.	-	.	ID=comp146527_c0_seq1.mrna1;geneID=comp146527_c0_seq1.path1;Name=comp146527_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=563;mismatches=1;indels=0;unknowns=0;Target=comp146527_c0_seq1 196 327 .;locus=RLOC_00015914
Chr2	stalkie_big_nohaplotig	exon	28926853	28927285	99	-	.	Parent=comp146527_c0_seq1.mrna1;Target=comp146527_c0_seq1 1 433 -
Chr2	stalkie_big_nohaplotig	exon	29061688	29061818	100	-	.	Parent=comp146527_c0_seq1.mrna1;Target=comp146527_c0_seq1 434 564 -
Chr2	stalkie_big_nohaplotig	CDS	28927048	28927179	.	-	0	Parent=comp146527_c0_seq1.mrna1
Chr2	gffcl	locus	28970919	28982451	.	+	.	ID=RLOC_00015915;geneIDs=comp154053_c0_seq1.path1;transcripts=comp154053_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28970919	28982451	.	+	.	ID=comp154053_c0_seq1.mrna1;geneID=comp154053_c0_seq1.path1;Name=comp154053_c0_seq1;Dir=sensecoverage=99.9;identity=98.8;matches=1268;mismatches=13;indels=2;unknowns=0;locus=RLOC_00015915
Chr2	stalkie_big_nohaplotig	exon	28970919	28971158	97	+	.	Parent=comp154053_c0_seq1.mrna1;Target=comp154053_c0_seq1 1 241 +
Chr2	stalkie_big_nohaplotig	exon	28971244	28971570	98	+	.	Parent=comp154053_c0_seq1.mrna1;Target=comp154053_c0_seq1 242 568 +
Chr2	stalkie_big_nohaplotig	exon	28971625	28971749	97	+	.	Parent=comp154053_c0_seq1.mrna1;Target=comp154053_c0_seq1 569 693 +
Chr2	stalkie_big_nohaplotig	exon	28981787	28981940	98	+	.	Parent=comp154053_c0_seq1.mrna1;Target=comp154053_c0_seq1 694 848 +
Chr2	stalkie_big_nohaplotig	exon	28982017	28982451	100	+	.	Parent=comp154053_c0_seq1.mrna1;Target=comp154053_c0_seq1 849 1283 +
Chr2	stalkie_big_nohaplotig	CDS	28971054	28971158	.	+	0	Parent=comp154053_c0_seq1.mrna1;Target=comp154053_c0_seq1 137 241 +
Chr2	stalkie_big_nohaplotig	CDS	28971244	28971450	.	+	0	Parent=comp154053_c0_seq1.mrna1;Target=comp154053_c0_seq1 242 448 +
Chr2	gffcl	locus	28997153	28998342	.	-	.	ID=RLOC_00015916;geneIDs=ORF1192.path1;transcripts=ORF1192.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	28997153	28998342	.	-	.	ID=ORF1192.mrna1;geneID=ORF1192.path1;Name=ORF1192;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1184;mismatches=6;indels=4;unknowns=0;Target=ORF1192 1194 1 .;CDS_Target=ORF1192 113 3 .;locus=RLOC_00015916
Chr2	stalkie_big_nohaplotig	exon	28997153	28998342	99	-	.	Parent=ORF1192.mrna1
Chr2	stalkie_big_nohaplotig	CDS	28998231	28998340	.	-	0	Parent=ORF1192.mrna1
Chr2	gffcl	locus	29001207	29004169	.	-	.	ID=RLOC_00015917;geneIDs=FBgn0021995.1.path1;transcripts=FBgn0021995.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29001207	29004169	.	-	.	ID=FBgn0021995.1.mrna1;geneID=FBgn0021995.1.path1;Name=FBgn0021995.1;Dir=sensecoverage=100.0;identity=98.7;matches=2298;mismatches=30;indels=0;unknowns=0;locus=RLOC_00015917
Chr2	stalkie_big_nohaplotig	exon	29001207	29001348	99	-	.	Parent=FBgn0021995.1.mrna1;Target=FBgn0021995.1 2187 2328 +
Chr2	stalkie_big_nohaplotig	exon	29001539	29002070	97	-	.	Parent=FBgn0021995.1.mrna1;Target=FBgn0021995.1 1655 2186 +
Chr2	stalkie_big_nohaplotig	exon	29002141	29002873	99	-	.	Parent=FBgn0021995.1.mrna1;Target=FBgn0021995.1 922 1654 +
Chr2	stalkie_big_nohaplotig	exon	29003102	29003710	98	-	.	Parent=FBgn0021995.1.mrna1;Target=FBgn0021995.1 313 921 +
Chr2	stalkie_big_nohaplotig	exon	29003762	29003977	99	-	.	Parent=FBgn0021995.1.mrna1;Target=FBgn0021995.1 97 312 +
Chr2	stalkie_big_nohaplotig	exon	29004074	29004169	97	-	.	Parent=FBgn0021995.1.mrna1;Target=FBgn0021995.1 1 96 +
Chr2	stalkie_big_nohaplotig	CDS	29001207	29001348	.	-	1	Parent=FBgn0021995.1.mrna1;Target=FBgn0021995.1 2187 2328 +
Chr2	stalkie_big_nohaplotig	CDS	29001539	29002070	.	-	2	Parent=FBgn0021995.1.mrna1;Target=FBgn0021995.1 1655 2186 +
Chr2	stalkie_big_nohaplotig	CDS	29002141	29002873	.	-	0	Parent=FBgn0021995.1.mrna1;Target=FBgn0021995.1 922 1654 +
Chr2	stalkie_big_nohaplotig	CDS	29003102	29003710	.	-	0	Parent=FBgn0021995.1.mrna1;Target=FBgn0021995.1 313 921 +
Chr2	stalkie_big_nohaplotig	CDS	29003762	29003977	.	-	0	Parent=FBgn0021995.1.mrna1;Target=FBgn0021995.1 97 312 +
Chr2	stalkie_big_nohaplotig	CDS	29004074	29004169	.	-	0	Parent=FBgn0021995.1.mrna1;Target=FBgn0021995.1 1 96 +
Chr2	gffcl	locus	29005937	29009052	.	-	.	ID=RLOC_00015918;geneIDs=FBgn0003062.1.path1,comp145462_c0_seq1.path1,comp148650_c0_seq1.path1;transcripts=comp148650_c0_seq1.mrna1,FBgn0003062.1.mrna1,comp145462_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29005937	29007780	.	-	.	ID=comp148650_c0_seq1.mrna1;geneID=comp148650_c0_seq1.path1;Name=comp148650_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=1350;mismatches=8;indels=1;unknowns=0;locus=RLOC_00015918
Chr2	stalkie_big_nohaplotig	exon	29005937	29006750	99	-	.	Parent=comp148650_c0_seq1.mrna1;Target=comp148650_c0_seq1 545 1359 +
Chr2	stalkie_big_nohaplotig	exon	29006997	29007241	99	-	.	Parent=comp148650_c0_seq1.mrna1;Target=comp148650_c0_seq1 300 544 +
Chr2	stalkie_big_nohaplotig	exon	29007344	29007403	98	-	.	Parent=comp148650_c0_seq1.mrna1;Target=comp148650_c0_seq1 240 299 +
Chr2	stalkie_big_nohaplotig	exon	29007542	29007780	99	-	.	Parent=comp148650_c0_seq1.mrna1;Target=comp148650_c0_seq1 1 239 +
Chr2	stalkie_big_nohaplotig	CDS	29006160	29006750	.	-	0	Parent=comp148650_c0_seq1.mrna1;Target=comp148650_c0_seq1 545 1135 +
Chr2	stalkie_big_nohaplotig	CDS	29006997	29007241	.	-	2	Parent=comp148650_c0_seq1.mrna1;Target=comp148650_c0_seq1 300 544 +
Chr2	stalkie_big_nohaplotig	CDS	29007344	29007403	.	-	2	Parent=comp148650_c0_seq1.mrna1;Target=comp148650_c0_seq1 240 299 +
Chr2	stalkie_big_nohaplotig	CDS	29007542	29007554	.	-	0	Parent=comp148650_c0_seq1.mrna1;Target=comp148650_c0_seq1 227 239 +
Chr2	stalkie_big_nohaplotig	mRNA	29006163	29007308	.	-	.	ID=FBgn0003062.1.mrna1;geneID=FBgn0003062.1.path1;Name=FBgn0003062.1;Dir=sensecoverage=100.0;identity=98.6;matches=893;mismatches=7;indels=6;unknowns=0;locus=RLOC_00015918
Chr2	stalkie_big_nohaplotig	exon	29006163	29006750	99	-	.	Parent=FBgn0003062.1.mrna1;Target=FBgn0003062.1 319 906 +
Chr2	stalkie_big_nohaplotig	exon	29006997	29007308	96	-	.	Parent=FBgn0003062.1.mrna1;Target=FBgn0003062.1 1 318 +
Chr2	stalkie_big_nohaplotig	CDS	29006163	29006750	.	-	0	Parent=FBgn0003062.1.mrna1;Target=FBgn0003062.1 319 906 +
Chr2	stalkie_big_nohaplotig	CDS	29006997	29007308	.	-	0	Parent=FBgn0003062.1.mrna1;Target=FBgn0003062.1 1 318 +
Chr2	stalkie_big_nohaplotig	mRNA	29007381	29009052	.	-	.	ID=comp145462_c0_seq1.mrna1;geneID=comp145462_c0_seq1.path1;Name=comp145462_c0_seq1;Dir=antisensecoverage=100.0;identity=97.9;matches=279;mismatches=6;indels=0;unknowns=0;Target=comp145462_c0_seq1 157 285 .;locus=RLOC_00015918
Chr2	stalkie_big_nohaplotig	exon	29007381	29007403	100	-	.	Parent=comp145462_c0_seq1.mrna1;Target=comp145462_c0_seq1 1 23 -
Chr2	stalkie_big_nohaplotig	exon	29008599	29008650	100	-	.	Parent=comp145462_c0_seq1.mrna1;Target=comp145462_c0_seq1 24 75 -
Chr2	stalkie_big_nohaplotig	exon	29008729	29008796	98	-	.	Parent=comp145462_c0_seq1.mrna1;Target=comp145462_c0_seq1 76 143 -
Chr2	stalkie_big_nohaplotig	exon	29008911	29009052	96	-	.	Parent=comp145462_c0_seq1.mrna1;Target=comp145462_c0_seq1 144 285 -
Chr2	stalkie_big_nohaplotig	CDS	29008924	29009052	.	-	0	Parent=comp145462_c0_seq1.mrna1
Chr2	gffcl	locus	29009155	29009961	.	-	.	ID=RLOC_00015919;geneIDs=comp145012_c0_seq1.path1;transcripts=comp145012_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29009155	29009961	.	-	.	ID=comp145012_c0_seq1.mrna1;geneID=comp145012_c0_seq1.path1;Name=comp145012_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.5;matches=795;mismatches=12;indels=0;unknowns=0;Target=comp145012_c0_seq1 808 2 .;CDS_Target=comp145012_c0_seq1 705 178 .;locus=RLOC_00015919
Chr2	stalkie_big_nohaplotig	exon	29009155	29009961	98	-	.	Parent=comp145012_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	29009258	29009785	.	-	0	Parent=comp145012_c0_seq1.mrna1
Chr2	gffcl	locus	29011777	29022650	.	+	.	ID=RLOC_00015920;geneIDs=FBgn0034734.1.path1;transcripts=FBgn0034734.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29011777	29022650	.	+	.	ID=FBgn0034734.1.mrna1;geneID=FBgn0034734.1.path1;Name=FBgn0034734.1;Dir=sensecoverage=100.0;identity=98.8;matches=8235;mismatches=96;indels=0;unknowns=0;locus=RLOC_00015920
Chr2	stalkie_big_nohaplotig	exon	29011777	29011806	100	+	.	Parent=FBgn0034734.1.mrna1;Target=FBgn0034734.1 1 30 +
Chr2	stalkie_big_nohaplotig	exon	29013757	29019169	98	+	.	Parent=FBgn0034734.1.mrna1;Target=FBgn0034734.1 31 5443 +
Chr2	stalkie_big_nohaplotig	exon	29019692	29022147	98	+	.	Parent=FBgn0034734.1.mrna1;Target=FBgn0034734.1 5444 7899 +
Chr2	stalkie_big_nohaplotig	exon	29022219	29022650	99	+	.	Parent=FBgn0034734.1.mrna1;Target=FBgn0034734.1 7900 8331 +
Chr2	stalkie_big_nohaplotig	CDS	29011777	29011806	.	+	0	Parent=FBgn0034734.1.mrna1;Target=FBgn0034734.1 1 30 +
Chr2	stalkie_big_nohaplotig	CDS	29013757	29019169	.	+	0	Parent=FBgn0034734.1.mrna1;Target=FBgn0034734.1 31 5443 +
Chr2	stalkie_big_nohaplotig	CDS	29019692	29022147	.	+	2	Parent=FBgn0034734.1.mrna1;Target=FBgn0034734.1 5444 7899 +
Chr2	stalkie_big_nohaplotig	CDS	29022219	29022650	.	+	0	Parent=FBgn0034734.1.mrna1;Target=FBgn0034734.1 7900 8331 +
Chr2	gffcl	locus	29078582	29079170	.	+	.	ID=RLOC_00015921;geneIDs=comp151608_c1_seq1.path1;transcripts=comp151608_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29078582	29079170	.	+	.	ID=comp151608_c1_seq1.mrna1;geneID=comp151608_c1_seq1.path1;Name=comp151608_c1_seq1;Dir=indeterminatecoverage=83.7;identity=95.6;matches=563;mismatches=26;indels=0;unknowns=0;Target=comp151608_c1_seq1 589 1 .;CDS_Target=comp151608_c1_seq1 589 338 .;locus=RLOC_00015921
Chr2	stalkie_big_nohaplotig	exon	29078582	29079170	95	+	.	Parent=comp151608_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	29078919	29079170	.	+	0	Parent=comp151608_c1_seq1.mrna1
Chr2	gffcl	locus	29093327	29093649	.	-	.	ID=RLOC_00015922;geneIDs=comp306298_c0_seq1.path1;transcripts=comp306298_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29093327	29093649	.	-	.	ID=comp306298_c0_seq1.mrna1;geneID=comp306298_c0_seq1.path1;Name=comp306298_c0_seq1;Dir=indeterminatecoverage=99.1;identity=100.0;matches=323;mismatches=0;indels=0;unknowns=0;Target=comp306298_c0_seq1 323 1 .;CDS_Target=comp306298_c0_seq1 271 71 .;locus=RLOC_00015922
Chr2	stalkie_big_nohaplotig	exon	29093327	29093649	100	-	.	Parent=comp306298_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	29093379	29093579	.	-	0	Parent=comp306298_c0_seq1.mrna1
Chr2	gffcl	locus	29095943	29098261	.	-	.	ID=RLOC_00015923;geneIDs=FBgn0035024.4.path1;transcripts=FBgn0035024.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29095943	29098261	.	-	.	ID=FBgn0035024.4.mrna1;geneID=FBgn0035024.4.path1;Name=FBgn0035024.4;Dir=sensecoverage=100.0;identity=100.0;matches=2265;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015923
Chr2	stalkie_big_nohaplotig	exon	29095943	29097900	100	-	.	Parent=FBgn0035024.4.mrna1;Target=FBgn0035024.4 308 2265 +
Chr2	stalkie_big_nohaplotig	exon	29097955	29098261	100	-	.	Parent=FBgn0035024.4.mrna1;Target=FBgn0035024.4 1 307 +
Chr2	stalkie_big_nohaplotig	CDS	29095943	29097900	.	-	2	Parent=FBgn0035024.4.mrna1;Target=FBgn0035024.4 308 2265 +
Chr2	stalkie_big_nohaplotig	CDS	29097955	29098261	.	-	0	Parent=FBgn0035024.4.mrna1;Target=FBgn0035024.4 1 307 +
Chr2	gffcl	locus	29103137	29103796	.	-	.	ID=RLOC_00015924;geneIDs=comp150100_c0_seq1.path1;transcripts=comp150100_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29103137	29103796	.	-	.	ID=comp150100_c0_seq1.mrna1;geneID=comp150100_c0_seq1.path1;Name=comp150100_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=660;mismatches=0;indels=1;unknowns=0;Target=comp150100_c0_seq1 661 1 .;CDS_Target=comp150100_c0_seq1 130 47 .;locus=RLOC_00015924
Chr2	stalkie_big_nohaplotig	exon	29103137	29103796	99	-	.	Parent=comp150100_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	29103667	29103750	.	-	0	Parent=comp150100_c0_seq1.mrna1
Chr2	gffcl	locus	29110090	29116433	.	+	.	ID=RLOC_00015925;geneIDs=FBgn0029762.1.path1;transcripts=FBgn0029762.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29110090	29116433	.	+	.	ID=FBgn0029762.1.mrna1;geneID=FBgn0029762.1.path1;Name=FBgn0029762.1;Dir=sensecoverage=100.0;identity=100.0;matches=1845;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015925
Chr2	stalkie_big_nohaplotig	exon	29110090	29110143	100	+	.	Parent=FBgn0029762.1.mrna1;Target=FBgn0029762.1 1 54 +
Chr2	stalkie_big_nohaplotig	exon	29113982	29114168	100	+	.	Parent=FBgn0029762.1.mrna1;Target=FBgn0029762.1 55 241 +
Chr2	stalkie_big_nohaplotig	exon	29114227	29114316	100	+	.	Parent=FBgn0029762.1.mrna1;Target=FBgn0029762.1 242 331 +
Chr2	stalkie_big_nohaplotig	exon	29114405	29114630	100	+	.	Parent=FBgn0029762.1.mrna1;Target=FBgn0029762.1 332 557 +
Chr2	stalkie_big_nohaplotig	exon	29114757	29115027	100	+	.	Parent=FBgn0029762.1.mrna1;Target=FBgn0029762.1 558 828 +
Chr2	stalkie_big_nohaplotig	exon	29115088	29115191	100	+	.	Parent=FBgn0029762.1.mrna1;Target=FBgn0029762.1 829 932 +
Chr2	stalkie_big_nohaplotig	exon	29115252	29115618	100	+	.	Parent=FBgn0029762.1.mrna1;Target=FBgn0029762.1 933 1299 +
Chr2	stalkie_big_nohaplotig	exon	29115682	29115781	100	+	.	Parent=FBgn0029762.1.mrna1;Target=FBgn0029762.1 1300 1399 +
Chr2	stalkie_big_nohaplotig	exon	29115841	29116017	100	+	.	Parent=FBgn0029762.1.mrna1;Target=FBgn0029762.1 1400 1576 +
Chr2	stalkie_big_nohaplotig	exon	29116095	29116189	100	+	.	Parent=FBgn0029762.1.mrna1;Target=FBgn0029762.1 1577 1671 +
Chr2	stalkie_big_nohaplotig	exon	29116260	29116433	100	+	.	Parent=FBgn0029762.1.mrna1;Target=FBgn0029762.1 1672 1845 +
Chr2	stalkie_big_nohaplotig	CDS	29110090	29110143	.	+	0	Parent=FBgn0029762.1.mrna1;Target=FBgn0029762.1 1 54 +
Chr2	stalkie_big_nohaplotig	CDS	29113982	29114168	.	+	0	Parent=FBgn0029762.1.mrna1;Target=FBgn0029762.1 55 241 +
Chr2	stalkie_big_nohaplotig	CDS	29114227	29114316	.	+	2	Parent=FBgn0029762.1.mrna1;Target=FBgn0029762.1 242 331 +
Chr2	stalkie_big_nohaplotig	CDS	29114405	29114630	.	+	2	Parent=FBgn0029762.1.mrna1;Target=FBgn0029762.1 332 557 +
Chr2	stalkie_big_nohaplotig	CDS	29114757	29115027	.	+	1	Parent=FBgn0029762.1.mrna1;Target=FBgn0029762.1 558 828 +
Chr2	stalkie_big_nohaplotig	CDS	29115088	29115191	.	+	0	Parent=FBgn0029762.1.mrna1;Target=FBgn0029762.1 829 932 +
Chr2	stalkie_big_nohaplotig	CDS	29115252	29115618	.	+	1	Parent=FBgn0029762.1.mrna1;Target=FBgn0029762.1 933 1299 +
Chr2	stalkie_big_nohaplotig	CDS	29115682	29115781	.	+	0	Parent=FBgn0029762.1.mrna1;Target=FBgn0029762.1 1300 1399 +
Chr2	stalkie_big_nohaplotig	CDS	29115841	29116017	.	+	2	Parent=FBgn0029762.1.mrna1;Target=FBgn0029762.1 1400 1576 +
Chr2	stalkie_big_nohaplotig	CDS	29116095	29116189	.	+	2	Parent=FBgn0029762.1.mrna1;Target=FBgn0029762.1 1577 1671 +
Chr2	stalkie_big_nohaplotig	CDS	29116260	29116433	.	+	0	Parent=FBgn0029762.1.mrna1;Target=FBgn0029762.1 1672 1845 +
Chr2	gffcl	locus	29129724	29130946	.	+	.	ID=RLOC_00015926;geneIDs=comp153041_c0_seq1.path1;transcripts=comp153041_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29129724	29130946	.	+	.	ID=comp153041_c0_seq1.mrna1;geneID=comp153041_c0_seq1.path1;Name=comp153041_c0_seq1;Dir=sensecoverage=100.0;identity=99.0;matches=1117;mismatches=5;indels=6;unknowns=0;locus=RLOC_00015926
Chr2	stalkie_big_nohaplotig	exon	29129724	29129993	100	+	.	Parent=comp153041_c0_seq1.mrna1;Target=comp153041_c0_seq1 1 270 +
Chr2	stalkie_big_nohaplotig	exon	29130095	29130946	98	+	.	Parent=comp153041_c0_seq1.mrna1;Target=comp153041_c0_seq1 271 1128 +
Chr2	stalkie_big_nohaplotig	CDS	29129937	29129993	.	+	0	Parent=comp153041_c0_seq1.mrna1;Target=comp153041_c0_seq1 214 270 +
Chr2	stalkie_big_nohaplotig	CDS	29130095	29130586	.	+	0	Parent=comp153041_c0_seq1.mrna1;Target=comp153041_c0_seq1 271 768 +
Chr2	gffcl	locus	29140027	29141796	.	-	.	ID=RLOC_00015927;geneIDs=ORF467.path1;transcripts=ORF467.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29140027	29141796	.	-	.	ID=ORF467.mrna1;geneID=ORF467.path1;Name=ORF467;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1770;mismatches=0;indels=0;unknowns=0;Target=ORF467 1770 1 .;locus=RLOC_00015927
Chr2	stalkie_big_nohaplotig	exon	29140027	29141796	100	-	.	Parent=ORF467.mrna1
Chr2	stalkie_big_nohaplotig	CDS	29140027	29141796	.	-	0	Parent=ORF467.mrna1
Chr2	gffcl	locus	29158628	29168865	.	-	.	ID=RLOC_00015928;geneIDs=comp152655_c0_seq1.path1;transcripts=comp152655_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29158628	29168865	.	-	.	ID=comp152655_c0_seq1.mrna1;geneID=comp152655_c0_seq1.path1;Name=comp152655_c0_seq1;Dir=antisensecoverage=99.7;identity=99.2;matches=789;mismatches=6;indels=0;unknowns=0;locus=RLOC_00015928
Chr2	stalkie_big_nohaplotig	exon	29158628	29158686	100	-	.	Parent=comp152655_c0_seq1.mrna1;Target=comp152655_c0_seq1 2 60 -
Chr2	stalkie_big_nohaplotig	exon	29167325	29167810	99	-	.	Parent=comp152655_c0_seq1.mrna1;Target=comp152655_c0_seq1 61 546 -
Chr2	stalkie_big_nohaplotig	exon	29168549	29168739	100	-	.	Parent=comp152655_c0_seq1.mrna1;Target=comp152655_c0_seq1 547 737 -
Chr2	stalkie_big_nohaplotig	exon	29168807	29168865	93	-	.	Parent=comp152655_c0_seq1.mrna1;Target=comp152655_c0_seq1 738 796 -
Chr2	stalkie_big_nohaplotig	CDS	29167763	29167810	.	-	0	Parent=comp152655_c0_seq1.mrna1;Target=comp152655_c0_seq1 499 546 .
Chr2	stalkie_big_nohaplotig	CDS	29168549	29168710	.	-	0	Parent=comp152655_c0_seq1.mrna1;Target=comp152655_c0_seq1 547 708 .
Chr2	gffcl	locus	29260606	29354724	.	+	.	ID=RLOC_00015929;geneIDs=FBgn0033948.1.path1,FBgn0034261.1.path1,comp162208_c0_seq1.path1;transcripts=comp162208_c0_seq1.mrna1,FBgn0034261.1.mrna1,FBgn0033948.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29260606	29354724	.	+	.	ID=comp162208_c0_seq1.mrna1;geneID=comp162208_c0_seq1.path1;Name=comp162208_c0_seq1;Dir=indeterminatecoverage=97.8;identity=98.8;matches=4232;mismatches=50;indels=0;unknowns=0;locus=RLOC_00015929
Chr2	stalkie_big_nohaplotig	exon	29260606	29260801	98	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 214 19 .
Chr2	stalkie_big_nohaplotig	exon	29260976	29261069	98	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 308 215 .
Chr2	stalkie_big_nohaplotig	exon	29265038	29265272	98	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 543 309 .
Chr2	stalkie_big_nohaplotig	exon	29265341	29265577	100	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 780 544 .
Chr2	stalkie_big_nohaplotig	exon	29266580	29266674	100	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 875 781 .
Chr2	stalkie_big_nohaplotig	exon	29266736	29267300	99	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 1440 876 .
Chr2	stalkie_big_nohaplotig	exon	29267356	29268384	99	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 2469 1441 .
Chr2	stalkie_big_nohaplotig	exon	29268446	29268678	99	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 2702 2470 .
Chr2	stalkie_big_nohaplotig	exon	29268739	29268948	100	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 2912 2703 .
Chr2	stalkie_big_nohaplotig	exon	29274660	29274758	96	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 3011 2913 .
Chr2	stalkie_big_nohaplotig	exon	29274826	29275129	96	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 3315 3012 .
Chr2	stalkie_big_nohaplotig	exon	29275190	29275382	95	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 3508 3316 .
Chr2	stalkie_big_nohaplotig	exon	29275459	29275834	98	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 3884 3509 .
Chr2	stalkie_big_nohaplotig	exon	29275851	29276050	98	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 4112 3913 .
Chr2	stalkie_big_nohaplotig	exon	29276113	29276273	96	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 4273 4113 .
Chr2	stalkie_big_nohaplotig	exon	29276286	29276287	100	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 4288 4287 .
Chr2	stalkie_big_nohaplotig	exon	29284902	29284906	100	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 4293 4289 .
Chr2	stalkie_big_nohaplotig	exon	29291887	29291896	100	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 4303 4294 .
Chr2	stalkie_big_nohaplotig	exon	29305373	29305381	100	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 4318 4310 .
Chr2	stalkie_big_nohaplotig	exon	29310827	29310828	100	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 4327 4326 .
Chr2	stalkie_big_nohaplotig	exon	29318940	29318942	100	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 4330 4328 .
Chr2	stalkie_big_nohaplotig	exon	29325599	29325603	100	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 4335 4331 .
Chr2	stalkie_big_nohaplotig	exon	29336758	29336761	100	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 4339 4336 .
Chr2	stalkie_big_nohaplotig	exon	29344446	29344448	100	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 4342 4340 .
Chr2	stalkie_big_nohaplotig	exon	29354713	29354724	100	+	.	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 4354 4343 .
Chr2	stalkie_big_nohaplotig	CDS	29265045	29265272	.	+	0	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 543 316 .
Chr2	stalkie_big_nohaplotig	CDS	29265341	29265577	.	+	0	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 780 544 .
Chr2	stalkie_big_nohaplotig	CDS	29266580	29266674	.	+	0	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 875 781 .
Chr2	stalkie_big_nohaplotig	CDS	29266736	29267300	.	+	1	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 1440 876 .
Chr2	stalkie_big_nohaplotig	CDS	29267356	29268384	.	+	0	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 2469 1441 .
Chr2	stalkie_big_nohaplotig	CDS	29268446	29268678	.	+	0	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 2702 2470 .
Chr2	stalkie_big_nohaplotig	CDS	29268739	29268907	.	+	1	Parent=comp162208_c0_seq1.mrna1;Target=comp162208_c0_seq1 2871 2703 .
Chr2	stalkie_big_nohaplotig	mRNA	29260698	29268904	.	+	.	ID=FBgn0034261.1.mrna1;geneID=FBgn0034261.1.path1;Name=FBgn0034261.1;Dir=sensecoverage=100.0;identity=99.5;matches=2652;mismatches=12;indels=0;unknowns=0;locus=RLOC_00015929
Chr2	stalkie_big_nohaplotig	exon	29260698	29260801	100	+	.	Parent=FBgn0034261.1.mrna1;Target=FBgn0034261.1 1 104 +
Chr2	stalkie_big_nohaplotig	exon	29265038	29265272	98	+	.	Parent=FBgn0034261.1.mrna1;Target=FBgn0034261.1 105 339 +
Chr2	stalkie_big_nohaplotig	exon	29265341	29265577	100	+	.	Parent=FBgn0034261.1.mrna1;Target=FBgn0034261.1 340 576 +
Chr2	stalkie_big_nohaplotig	exon	29266580	29266674	100	+	.	Parent=FBgn0034261.1.mrna1;Target=FBgn0034261.1 577 671 +
Chr2	stalkie_big_nohaplotig	exon	29266736	29267300	99	+	.	Parent=FBgn0034261.1.mrna1;Target=FBgn0034261.1 672 1236 +
Chr2	stalkie_big_nohaplotig	exon	29267356	29268384	99	+	.	Parent=FBgn0034261.1.mrna1;Target=FBgn0034261.1 1237 2265 +
Chr2	stalkie_big_nohaplotig	exon	29268446	29268678	99	+	.	Parent=FBgn0034261.1.mrna1;Target=FBgn0034261.1 2266 2498 +
Chr2	stalkie_big_nohaplotig	exon	29268739	29268904	100	+	.	Parent=FBgn0034261.1.mrna1;Target=FBgn0034261.1 2499 2664 +
Chr2	stalkie_big_nohaplotig	CDS	29260698	29260801	.	+	0	Parent=FBgn0034261.1.mrna1;Target=FBgn0034261.1 1 104 +
Chr2	stalkie_big_nohaplotig	CDS	29265038	29265272	.	+	1	Parent=FBgn0034261.1.mrna1;Target=FBgn0034261.1 105 339 +
Chr2	stalkie_big_nohaplotig	CDS	29265341	29265577	.	+	0	Parent=FBgn0034261.1.mrna1;Target=FBgn0034261.1 340 576 +
Chr2	stalkie_big_nohaplotig	CDS	29266580	29266674	.	+	0	Parent=FBgn0034261.1.mrna1;Target=FBgn0034261.1 577 671 +
Chr2	stalkie_big_nohaplotig	CDS	29266736	29267300	.	+	1	Parent=FBgn0034261.1.mrna1;Target=FBgn0034261.1 672 1236 +
Chr2	stalkie_big_nohaplotig	CDS	29267356	29268384	.	+	0	Parent=FBgn0034261.1.mrna1;Target=FBgn0034261.1 1237 2265 +
Chr2	stalkie_big_nohaplotig	CDS	29268446	29268678	.	+	0	Parent=FBgn0034261.1.mrna1;Target=FBgn0034261.1 2266 2498 +
Chr2	stalkie_big_nohaplotig	CDS	29268739	29268904	.	+	1	Parent=FBgn0034261.1.mrna1;Target=FBgn0034261.1 2499 2664 +
Chr2	stalkie_big_nohaplotig	mRNA	29304012	29305771	.	+	.	ID=FBgn0033948.1.mrna1;geneID=FBgn0033948.1.path1;Name=FBgn0033948.1;Dir=sensecoverage=100.0;identity=98.7;matches=1487;mismatches=19;indels=0;unknowns=0;locus=RLOC_00015929
Chr2	stalkie_big_nohaplotig	exon	29304012	29304069	98	+	.	Parent=FBgn0033948.1.mrna1;Target=FBgn0033948.1 1 58 +
Chr2	stalkie_big_nohaplotig	exon	29304143	29304396	98	+	.	Parent=FBgn0033948.1.mrna1;Target=FBgn0033948.1 59 312 +
Chr2	stalkie_big_nohaplotig	exon	29304459	29304682	98	+	.	Parent=FBgn0033948.1.mrna1;Target=FBgn0033948.1 313 536 +
Chr2	stalkie_big_nohaplotig	exon	29304745	29304948	99	+	.	Parent=FBgn0033948.1.mrna1;Target=FBgn0033948.1 537 740 +
Chr2	stalkie_big_nohaplotig	exon	29305006	29305771	98	+	.	Parent=FBgn0033948.1.mrna1;Target=FBgn0033948.1 741 1506 +
Chr2	stalkie_big_nohaplotig	CDS	29304143	29304396	.	+	1	Parent=FBgn0033948.1.mrna1;Target=FBgn0033948.1 59 312 +
Chr2	stalkie_big_nohaplotig	CDS	29304459	29304682	.	+	2	Parent=FBgn0033948.1.mrna1;Target=FBgn0033948.1 313 536 +
Chr2	stalkie_big_nohaplotig	CDS	29304745	29304948	.	+	0	Parent=FBgn0033948.1.mrna1;Target=FBgn0033948.1 537 740 +
Chr2	stalkie_big_nohaplotig	CDS	29305006	29305771	.	+	0	Parent=FBgn0033948.1.mrna1;Target=FBgn0033948.1 741 1506 +
Chr2	gffcl	locus	29270192	29271633	.	-	.	ID=RLOC_00015930;geneIDs=comp156258_c0_seq1.path1;transcripts=comp156258_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29270192	29271633	.	-	.	ID=comp156258_c0_seq1.mrna1;geneID=comp156258_c0_seq1.path1;Name=comp156258_c0_seq1;Dir=antisensecoverage=100.0;identity=95.8;matches=1305;mismatches=39;indels=18;unknowns=0;Target=comp156258_c0_seq1 997 1089 .;locus=RLOC_00015930
Chr2	stalkie_big_nohaplotig	exon	29270192	29270255	86	-	.	Parent=comp156258_c0_seq1.mrna1;Target=comp156258_c0_seq1 1 66 -
Chr2	stalkie_big_nohaplotig	exon	29270350	29271633	96	-	.	Parent=comp156258_c0_seq1.mrna1;Target=comp156258_c0_seq1 67 1358 -
Chr2	stalkie_big_nohaplotig	CDS	29271272	29271364	.	-	0	Parent=comp156258_c0_seq1.mrna1
Chr2	gffcl	locus	29272513	29273102	.	-	.	ID=RLOC_00015931;geneIDs=comp153670_c0_seq1.path1;transcripts=comp153670_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29272513	29273102	.	-	.	ID=comp153670_c0_seq1.mrna1;geneID=comp153670_c0_seq1.path1;Name=comp153670_c0_seq1;Dir=antisensecoverage=90.4;identity=92.8;matches=480;mismatches=31;indels=6;unknowns=0;Target=comp153670_c0_seq1 495 509 .;locus=RLOC_00015931
Chr2	stalkie_big_nohaplotig	exon	29272513	29272753	97	-	.	Parent=comp153670_c0_seq1.mrna1;Target=comp153670_c0_seq1 1 240 -
Chr2	stalkie_big_nohaplotig	exon	29272827	29273102	89	-	.	Parent=comp153670_c0_seq1.mrna1;Target=comp153670_c0_seq1 241 511 -
Chr2	stalkie_big_nohaplotig	CDS	29273086	29273100	.	-	0	Parent=comp153670_c0_seq1.mrna1
Chr2	gffcl	locus	29290729	29297565	.	+	.	ID=RLOC_00015932;geneIDs=FBgn0016059.1.path1;transcripts=FBgn0016059.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29290729	29297565	.	+	.	ID=FBgn0016059.1.mrna1;geneID=FBgn0016059.1.path1;Name=FBgn0016059.1;Dir=sensecoverage=100.0;identity=99.1;matches=2361;mismatches=21;indels=0;unknowns=0;locus=RLOC_00015932
Chr2	stalkie_big_nohaplotig	exon	29290729	29290882	100	+	.	Parent=FBgn0016059.1.mrna1;Target=FBgn0016059.1 1 154 +
Chr2	stalkie_big_nohaplotig	exon	29291042	29291135	100	+	.	Parent=FBgn0016059.1.mrna1;Target=FBgn0016059.1 155 248 +
Chr2	stalkie_big_nohaplotig	exon	29294399	29294918	99	+	.	Parent=FBgn0016059.1.mrna1;Target=FBgn0016059.1 249 768 +
Chr2	stalkie_big_nohaplotig	exon	29294985	29295126	100	+	.	Parent=FBgn0016059.1.mrna1;Target=FBgn0016059.1 769 910 +
Chr2	stalkie_big_nohaplotig	exon	29295188	29296264	98	+	.	Parent=FBgn0016059.1.mrna1;Target=FBgn0016059.1 911 1987 +
Chr2	stalkie_big_nohaplotig	exon	29297106	29297301	96	+	.	Parent=FBgn0016059.1.mrna1;Target=FBgn0016059.1 1988 2183 +
Chr2	stalkie_big_nohaplotig	exon	29297367	29297565	100	+	.	Parent=FBgn0016059.1.mrna1;Target=FBgn0016059.1 2184 2382 +
Chr2	stalkie_big_nohaplotig	CDS	29290729	29290882	.	+	0	Parent=FBgn0016059.1.mrna1;Target=FBgn0016059.1 1 154 +
Chr2	stalkie_big_nohaplotig	CDS	29291042	29291135	.	+	2	Parent=FBgn0016059.1.mrna1;Target=FBgn0016059.1 155 248 +
Chr2	stalkie_big_nohaplotig	CDS	29294399	29294918	.	+	1	Parent=FBgn0016059.1.mrna1;Target=FBgn0016059.1 249 768 +
Chr2	stalkie_big_nohaplotig	CDS	29294985	29295126	.	+	0	Parent=FBgn0016059.1.mrna1;Target=FBgn0016059.1 769 910 +
Chr2	stalkie_big_nohaplotig	CDS	29295188	29296264	.	+	2	Parent=FBgn0016059.1.mrna1;Target=FBgn0016059.1 911 1987 +
Chr2	stalkie_big_nohaplotig	CDS	29297106	29297301	.	+	2	Parent=FBgn0016059.1.mrna1;Target=FBgn0016059.1 1988 2183 +
Chr2	stalkie_big_nohaplotig	CDS	29297367	29297565	.	+	1	Parent=FBgn0016059.1.mrna1;Target=FBgn0016059.1 2184 2382 +
Chr2	gffcl	locus	29298501	29301087	.	-	.	ID=RLOC_00015933;geneIDs=comp161277_c0_seq1.path1;transcripts=comp161277_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29298501	29301087	.	-	.	ID=comp161277_c0_seq1.mrna1;geneID=comp161277_c0_seq1.path1;Name=comp161277_c0_seq1;Dir=indeterminatecoverage=98.5;identity=97.4;matches=2538;mismatches=36;indels=33;unknowns=0;Target=comp161277_c0_seq1 1081 959 .;locus=RLOC_00015933
Chr2	stalkie_big_nohaplotig	exon	29298501	29300316	97	-	.	Parent=comp161277_c0_seq1.mrna1;Target=comp161277_c0_seq1 2723 898 .
Chr2	stalkie_big_nohaplotig	exon	29300327	29301087	97	-	.	Parent=comp161277_c0_seq1.mrna1;Target=comp161277_c0_seq1 818 41 .
Chr2	stalkie_big_nohaplotig	CDS	29300131	29300255	.	-	0	Parent=comp161277_c0_seq1.mrna1
Chr2	gffcl	locus	29301128	29301526	.	-	.	ID=RLOC_00015934;geneIDs=comp156654_c0_seq1.path1;transcripts=comp156654_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29301128	29301526	.	-	.	ID=comp156654_c0_seq1.mrna1;geneID=comp156654_c0_seq1.path1;Name=comp156654_c0_seq1;Dir=indeterminatecoverage=64.7;identity=100.0;matches=399;mismatches=0;indels=0;unknowns=0;Target=comp156654_c0_seq1 399 1 .;CDS_Target=comp156654_c0_seq1 129 1 .;locus=RLOC_00015934
Chr2	stalkie_big_nohaplotig	exon	29301128	29301526	100	-	.	Parent=comp156654_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	29301398	29301526	.	-	0	Parent=comp156654_c0_seq1.mrna1
Chr2	gffcl	locus	29308690	29308990	.	-	.	ID=RLOC_00015935;geneIDs=FBgn0050109.1.path1;transcripts=FBgn0050109.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29308690	29308990	.	-	.	ID=FBgn0050109.1.mrna1;geneID=FBgn0050109.1.path1;Name=FBgn0050109.1;Dir=sensecoverage=100.0;identity=100.0;matches=246;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015935
Chr2	stalkie_big_nohaplotig	exon	29308690	29308782	100	-	.	Parent=FBgn0050109.1.mrna1;Target=FBgn0050109.1 154 246 +
Chr2	stalkie_big_nohaplotig	exon	29308838	29308990	100	-	.	Parent=FBgn0050109.1.mrna1;Target=FBgn0050109.1 1 153 +
Chr2	stalkie_big_nohaplotig	CDS	29308690	29308782	.	-	0	Parent=FBgn0050109.1.mrna1;Target=FBgn0050109.1 154 246 +
Chr2	stalkie_big_nohaplotig	CDS	29308838	29308990	.	-	0	Parent=FBgn0050109.1.mrna1;Target=FBgn0050109.1 1 153 +
Chr2	gffcl	locus	29310873	29314032	.	+	.	ID=RLOC_00015936;geneIDs=FBgn0034259.1.path1;transcripts=FBgn0034259.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29310873	29314032	.	+	.	ID=FBgn0034259.1.mrna1;geneID=FBgn0034259.1.path1;Name=FBgn0034259.1;Dir=sensecoverage=100.0;identity=98.5;matches=850;mismatches=11;indels=2;unknowns=0;Target=FBgn0034259.1 3 26 +;locus=RLOC_00015936
Chr2	stalkie_big_nohaplotig	exon	29310873	29311148	97	+	.	Parent=FBgn0034259.1.mrna1;Target=FBgn0034259.1 1 274 +
Chr2	stalkie_big_nohaplotig	exon	29311296	29311446	98	+	.	Parent=FBgn0034259.1.mrna1;Target=FBgn0034259.1 275 425 +
Chr2	stalkie_big_nohaplotig	exon	29311504	29311697	99	+	.	Parent=FBgn0034259.1.mrna1;Target=FBgn0034259.1 426 619 +
Chr2	stalkie_big_nohaplotig	exon	29312840	29312928	98	+	.	Parent=FBgn0034259.1.mrna1;Target=FBgn0034259.1 620 708 +
Chr2	stalkie_big_nohaplotig	exon	29313880	29314032	98	+	.	Parent=FBgn0034259.1.mrna1;Target=FBgn0034259.1 709 861 +
Chr2	stalkie_big_nohaplotig	CDS	29310875	29310898	.	+	0	Parent=FBgn0034259.1.mrna1
Chr2	gffcl	locus	29317497	29318242	.	-	.	ID=RLOC_00015937;geneIDs=comp610744_c0_seq1.path1;transcripts=comp610744_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29317497	29318242	.	-	.	ID=comp610744_c0_seq1.mrna1;geneID=comp610744_c0_seq1.path1;Name=comp610744_c0_seq1;Dir=indeterminatecoverage=97.8;identity=99.9;matches=745;mismatches=1;indels=0;unknowns=0;Target=comp610744_c0_seq1 746 1 .;CDS_Target=comp610744_c0_seq1 122 3 .;locus=RLOC_00015937
Chr2	stalkie_big_nohaplotig	exon	29317497	29318242	99	-	.	Parent=comp610744_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	29318121	29318240	.	-	0	Parent=comp610744_c0_seq1.mrna1
Chr2	gffcl	locus	29322525	29323250	.	-	.	ID=RLOC_00015938;geneIDs=comp150118_c0_seq1.path1;transcripts=comp150118_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29322525	29323250	.	-	.	ID=comp150118_c0_seq1.mrna1;geneID=comp150118_c0_seq1.path1;Name=comp150118_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.2;matches=706;mismatches=20;indels=0;unknowns=0;Target=comp150118_c0_seq1 727 2 .;CDS_Target=comp150118_c0_seq1 254 123 .;locus=RLOC_00015938
Chr2	stalkie_big_nohaplotig	exon	29322525	29323250	97	-	.	Parent=comp150118_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	29322998	29323129	.	-	0	Parent=comp150118_c0_seq1.mrna1
Chr2	gffcl	locus	29330692	29426255	.	+	.	ID=RLOC_00015939;geneIDs=FBgn0034253.1.path1;transcripts=FBgn0034253.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29330692	29426255	.	+	.	ID=FBgn0034253.1.mrna1;geneID=FBgn0034253.1.path1;Name=FBgn0034253.1;Dir=sensecoverage=100.0;identity=99.2;matches=3800;mismatches=31;indels=0;unknowns=0;locus=RLOC_00015939
Chr2	stalkie_big_nohaplotig	exon	29330692	29330779	100	+	.	Parent=FBgn0034253.1.mrna1;Target=FBgn0034253.1 1 88 +
Chr2	stalkie_big_nohaplotig	exon	29410489	29410730	99	+	.	Parent=FBgn0034253.1.mrna1;Target=FBgn0034253.1 89 330 +
Chr2	stalkie_big_nohaplotig	exon	29419017	29419238	100	+	.	Parent=FBgn0034253.1.mrna1;Target=FBgn0034253.1 331 552 +
Chr2	stalkie_big_nohaplotig	exon	29422977	29426255	99	+	.	Parent=FBgn0034253.1.mrna1;Target=FBgn0034253.1 553 3831 +
Chr2	stalkie_big_nohaplotig	CDS	29330692	29330779	.	+	0	Parent=FBgn0034253.1.mrna1;Target=FBgn0034253.1 1 88 +
Chr2	stalkie_big_nohaplotig	CDS	29410489	29410730	.	+	2	Parent=FBgn0034253.1.mrna1;Target=FBgn0034253.1 89 330 +
Chr2	stalkie_big_nohaplotig	CDS	29419017	29419238	.	+	0	Parent=FBgn0034253.1.mrna1;Target=FBgn0034253.1 331 552 +
Chr2	stalkie_big_nohaplotig	CDS	29422977	29426255	.	+	0	Parent=FBgn0034253.1.mrna1;Target=FBgn0034253.1 553 3831 +
Chr2	gffcl	locus	29346264	29346489	.	+	.	ID=RLOC_00015940;geneIDs=comp70976_c0_seq1.path2;transcripts=comp70976_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	29346264	29346489	.	+	.	ID=comp70976_c0_seq1.mrna2;geneID=comp70976_c0_seq1.path2;Name=comp70976_c0_seq1;Dir=indeterminatecoverage=85.4;identity=91.2;matches=219;mismatches=7;indels=14;unknowns=0;Target=comp70976_c0_seq1 281 42 .;CDS_Target=comp70976_c0_seq1 165 82 .;locus=RLOC_00015940
Chr2	stalkie_big_nohaplotig	exon	29346264	29346489	91	+	.	Parent=comp70976_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	29346304	29346385	.	+	0	Parent=comp70976_c0_seq1.mrna2
Chr2	gffcl	locus	29403423	29404431	.	-	.	ID=RLOC_00015941;geneIDs=ORF1687.path1;transcripts=ORF1687.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29403423	29404431	.	-	.	ID=ORF1687.mrna1;geneID=ORF1687.path1;Name=ORF1687;Dir=indeterminatecoverage=98.3;identity=98.7;matches=996;mismatches=13;indels=0;unknowns=0;Target=ORF1687 1026 18 .;CDS_Target=ORF1687 1026 19 .;locus=RLOC_00015941
Chr2	stalkie_big_nohaplotig	exon	29403423	29404431	98	-	.	Parent=ORF1687.mrna1
Chr2	stalkie_big_nohaplotig	CDS	29403423	29404430	.	-	0	Parent=ORF1687.mrna1
Chr2	gffcl	locus	29429395	29429577	.	+	.	ID=RLOC_00015943;geneIDs=comp148183_c0_seq1.path1;transcripts=comp148183_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29429395	29429577	.	+	.	ID=comp148183_c0_seq1.mrna1;geneID=comp148183_c0_seq1.path1;Name=comp148183_c0_seq1;Dir=indeterminatecoverage=89.7;identity=100.0;matches=183;mismatches=0;indels=0;unknowns=0;Target=comp148183_c0_seq1 183 1 .;CDS_Target=comp148183_c0_seq1 118 53 .;locus=RLOC_00015943
Chr2	stalkie_big_nohaplotig	exon	29429395	29429577	100	+	.	Parent=comp148183_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	29429447	29429512	.	+	0	Parent=comp148183_c0_seq1.mrna1
Chr2	gffcl	locus	29435317	29435646	.	-	.	ID=RLOC_00015944;geneIDs=comp139171_c0_seq1.path1;transcripts=comp139171_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29435317	29435646	.	-	.	ID=comp139171_c0_seq1.mrna1;geneID=comp139171_c0_seq1.path1;Name=comp139171_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.6;matches=309;mismatches=19;indels=2;unknowns=0;Target=comp139171_c0_seq1 328 1 .;CDS_Target=comp139171_c0_seq1 9 1 .;locus=RLOC_00015944
Chr2	stalkie_big_nohaplotig	exon	29435317	29435646	93	-	.	Parent=comp139171_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	29435638	29435646	.	-	0	Parent=comp139171_c0_seq1.mrna1
Chr2	gffcl	locus	29473621	29477525	.	+	.	ID=RLOC_00015945;geneIDs=FBgn0034684.1.path1;transcripts=FBgn0034684.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29473621	29477525	.	+	.	ID=FBgn0034684.1.mrna1;geneID=FBgn0034684.1.path1;Name=FBgn0034684.1;Dir=sensecoverage=100.0;identity=98.9;matches=1210;mismatches=14;indels=0;unknowns=0;locus=RLOC_00015945
Chr2	stalkie_big_nohaplotig	exon	29473621	29473726	99	+	.	Parent=FBgn0034684.1.mrna1;Target=FBgn0034684.1 1 106 +
Chr2	stalkie_big_nohaplotig	exon	29473824	29474091	99	+	.	Parent=FBgn0034684.1.mrna1;Target=FBgn0034684.1 107 374 +
Chr2	stalkie_big_nohaplotig	exon	29474166	29474248	96	+	.	Parent=FBgn0034684.1.mrna1;Target=FBgn0034684.1 375 457 +
Chr2	stalkie_big_nohaplotig	exon	29474992	29475138	97	+	.	Parent=FBgn0034684.1.mrna1;Target=FBgn0034684.1 458 604 +
Chr2	stalkie_big_nohaplotig	exon	29475206	29475675	99	+	.	Parent=FBgn0034684.1.mrna1;Target=FBgn0034684.1 605 1074 +
Chr2	stalkie_big_nohaplotig	exon	29477376	29477525	99	+	.	Parent=FBgn0034684.1.mrna1;Target=FBgn0034684.1 1075 1224 +
Chr2	stalkie_big_nohaplotig	CDS	29473621	29473726	.	+	0	Parent=FBgn0034684.1.mrna1;Target=FBgn0034684.1 1 106 +
Chr2	stalkie_big_nohaplotig	CDS	29473824	29474091	.	+	2	Parent=FBgn0034684.1.mrna1;Target=FBgn0034684.1 107 374 +
Chr2	stalkie_big_nohaplotig	CDS	29474166	29474248	.	+	1	Parent=FBgn0034684.1.mrna1;Target=FBgn0034684.1 375 457 +
Chr2	stalkie_big_nohaplotig	CDS	29474992	29475138	.	+	2	Parent=FBgn0034684.1.mrna1;Target=FBgn0034684.1 458 604 +
Chr2	stalkie_big_nohaplotig	CDS	29475206	29475675	.	+	2	Parent=FBgn0034684.1.mrna1;Target=FBgn0034684.1 605 1074 +
Chr2	stalkie_big_nohaplotig	CDS	29477376	29477525	.	+	0	Parent=FBgn0034684.1.mrna1;Target=FBgn0034684.1 1075 1224 +
Chr2	gffcl	locus	29477675	29479829	.	-	.	ID=RLOC_00015946;geneIDs=ORF3267.path1;transcripts=ORF3267.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29477675	29479829	.	-	.	ID=ORF3267.mrna1;geneID=ORF3267.path1;Name=ORF3267;Dir=sensecoverage=99.7;identity=98.5;matches=737;mismatches=11;indels=0;unknowns=0;locus=RLOC_00015946
Chr2	stalkie_big_nohaplotig	exon	29477675	29477772	98	-	.	Parent=ORF3267.mrna1;Target=ORF3267 651 748 +
Chr2	stalkie_big_nohaplotig	exon	29477843	29478284	98	-	.	Parent=ORF3267.mrna1;Target=ORF3267 209 650 +
Chr2	stalkie_big_nohaplotig	exon	29479622	29479829	99	-	.	Parent=ORF3267.mrna1;Target=ORF3267 1 208 +
Chr2	stalkie_big_nohaplotig	CDS	29477676	29477772	.	-	1	Parent=ORF3267.mrna1;Target=ORF3267 651 747 +
Chr2	stalkie_big_nohaplotig	CDS	29477843	29478284	.	-	2	Parent=ORF3267.mrna1;Target=ORF3267 209 650 +
Chr2	stalkie_big_nohaplotig	CDS	29479622	29479829	.	-	0	Parent=ORF3267.mrna1;Target=ORF3267 1 208 +
Chr2	gffcl	locus	29485161	29485378	.	+	.	ID=RLOC_00015947;geneIDs=comp116845_c0_seq1.path1;transcripts=comp116845_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29485161	29485378	.	+	.	ID=comp116845_c0_seq1.mrna1;geneID=comp116845_c0_seq1.path1;Name=comp116845_c0_seq1;Dir=indeterminatecoverage=85.2;identity=97.7;matches=213;mismatches=5;indels=0;unknowns=0;Target=comp116845_c0_seq1 218 1 .;CDS_Target=comp116845_c0_seq1 79 2 .;locus=RLOC_00015947
Chr2	stalkie_big_nohaplotig	exon	29485161	29485378	97	+	.	Parent=comp116845_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	29485162	29485239	.	+	0	Parent=comp116845_c0_seq1.mrna1
Chr2	gffcl	locus	29501295	29503026	.	+	.	ID=RLOC_00015948;geneIDs=ORF542.path1;transcripts=ORF542.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29501295	29503026	.	+	.	ID=ORF542.mrna1;geneID=ORF542.path1;Name=ORF542;Dir=sensecoverage=100.0;identity=96.5;matches=1613;mismatches=58;indels=0;unknowns=0;locus=RLOC_00015948
Chr2	stalkie_big_nohaplotig	exon	29501295	29501568	96	+	.	Parent=ORF542.mrna1;Target=ORF542 1 274 +
Chr2	stalkie_big_nohaplotig	exon	29501630	29503026	96	+	.	Parent=ORF542.mrna1;Target=ORF542 275 1671 +
Chr2	stalkie_big_nohaplotig	CDS	29501295	29501568	.	+	0	Parent=ORF542.mrna1;Target=ORF542 1 274 +
Chr2	stalkie_big_nohaplotig	CDS	29501630	29503026	.	+	2	Parent=ORF542.mrna1;Target=ORF542 275 1671 +
Chr2	gffcl	locus	29508122	29589098	.	+	.	ID=RLOC_00015949;geneIDs=FBgn0035482.2.path1,comp144467_c0_seq1.path1;transcripts=comp144467_c0_seq1.mrna1,FBgn0035482.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29508122	29589098	.	+	.	ID=comp144467_c0_seq1.mrna1;geneID=comp144467_c0_seq1.path1;Name=comp144467_c0_seq1;Dir=indeterminatecoverage=91.6;identity=98.6;matches=820;mismatches=11;indels=1;unknowns=0;Target=comp144467_c0_seq1 113 3 .;locus=RLOC_00015949
Chr2	stalkie_big_nohaplotig	exon	29508122	29508868	98	+	.	Parent=comp144467_c0_seq1.mrna1;Target=comp144467_c0_seq1 746 1 .
Chr2	stalkie_big_nohaplotig	exon	29535489	29535498	100	+	.	Parent=comp144467_c0_seq1.mrna1;Target=comp144467_c0_seq1 756 747 .
Chr2	stalkie_big_nohaplotig	exon	29541813	29541815	100	+	.	Parent=comp144467_c0_seq1.mrna1;Target=comp144467_c0_seq1 759 757 .
Chr2	stalkie_big_nohaplotig	exon	29546152	29546159	100	+	.	Parent=comp144467_c0_seq1.mrna1;Target=comp144467_c0_seq1 767 760 .
Chr2	stalkie_big_nohaplotig	exon	29552769	29552772	100	+	.	Parent=comp144467_c0_seq1.mrna1;Target=comp144467_c0_seq1 771 768 .
Chr2	stalkie_big_nohaplotig	exon	29553405	29553409	100	+	.	Parent=comp144467_c0_seq1.mrna1;Target=comp144467_c0_seq1 776 772 .
Chr2	stalkie_big_nohaplotig	exon	29553669	29553672	100	+	.	Parent=comp144467_c0_seq1.mrna1;Target=comp144467_c0_seq1 780 777 .
Chr2	stalkie_big_nohaplotig	exon	29562645	29562659	100	+	.	Parent=comp144467_c0_seq1.mrna1;Target=comp144467_c0_seq1 795 781 .
Chr2	stalkie_big_nohaplotig	exon	29567963	29567965	100	+	.	Parent=comp144467_c0_seq1.mrna1;Target=comp144467_c0_seq1 798 796 .
Chr2	stalkie_big_nohaplotig	exon	29571073	29571076	100	+	.	Parent=comp144467_c0_seq1.mrna1;Target=comp144467_c0_seq1 802 799 .
Chr2	stalkie_big_nohaplotig	exon	29578238	29578246	100	+	.	Parent=comp144467_c0_seq1.mrna1;Target=comp144467_c0_seq1 811 803 .
Chr2	stalkie_big_nohaplotig	exon	29578386	29578389	100	+	.	Parent=comp144467_c0_seq1.mrna1;Target=comp144467_c0_seq1 815 812 .
Chr2	stalkie_big_nohaplotig	exon	29584576	29584582	100	+	.	Parent=comp144467_c0_seq1.mrna1;Target=comp144467_c0_seq1 822 816 .
Chr2	stalkie_big_nohaplotig	exon	29584646	29584649	100	+	.	Parent=comp144467_c0_seq1.mrna1;Target=comp144467_c0_seq1 826 823 .
Chr2	stalkie_big_nohaplotig	exon	29589094	29589098	100	+	.	Parent=comp144467_c0_seq1.mrna1;Target=comp144467_c0_seq1 831 827 .
Chr2	stalkie_big_nohaplotig	CDS	29508124	29508234	.	+	0	Parent=comp144467_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29578386	29579129	.	+	.	ID=FBgn0035482.2.mrna1;geneID=FBgn0035482.2.path1;Name=FBgn0035482.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=744;mismatches=0;indels=0;unknowns=0;Target=FBgn0035482.2 744 1 .;locus=RLOC_00015949
Chr2	stalkie_big_nohaplotig	exon	29578386	29579129	100	+	.	Parent=FBgn0035482.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	29578386	29579129	.	+	0	Parent=FBgn0035482.2.mrna1
Chr2	gffcl	locus	29508890	29512800	.	-	.	ID=RLOC_00015950;geneIDs=comp143948_c0_seq1.path1;transcripts=comp143948_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29508890	29512800	.	-	.	ID=comp143948_c0_seq1.mrna1;geneID=comp143948_c0_seq1.path1;Name=comp143948_c0_seq1;Dir=sensecoverage=99.0;identity=97.3;matches=1995;mismatches=43;indels=13;unknowns=0;Target=comp143948_c0_seq1 489 905 +;locus=RLOC_00015950
Chr2	stalkie_big_nohaplotig	exon	29508890	29510472	97	-	.	Parent=comp143948_c0_seq1.mrna1;Target=comp143948_c0_seq1 467 2048 +
Chr2	stalkie_big_nohaplotig	exon	29512343	29512800	95	-	.	Parent=comp143948_c0_seq1.mrna1;Target=comp143948_c0_seq1 1 466 +
Chr2	stalkie_big_nohaplotig	CDS	29510035	29510450	.	-	0	Parent=comp143948_c0_seq1.mrna1
Chr2	gffcl	locus	29589144	29691705	.	-	.	ID=RLOC_00015951;geneIDs=ORF544.path1;transcripts=ORF544.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29589144	29691705	.	-	.	ID=ORF544.mrna1;geneID=ORF544.path1;Name=ORF544;Dir=sensecoverage=99.8;identity=97.1;matches=1616;mismatches=48;indels=0;unknowns=0;locus=RLOC_00015951
Chr2	stalkie_big_nohaplotig	exon	29589144	29589326	91	-	.	Parent=ORF544.mrna1;Target=ORF544 1482 1664 +
Chr2	stalkie_big_nohaplotig	exon	29589392	29589527	97	-	.	Parent=ORF544.mrna1;Target=ORF544 1346 1481 +
Chr2	stalkie_big_nohaplotig	exon	29589667	29589954	98	-	.	Parent=ORF544.mrna1;Target=ORF544 1058 1345 +
Chr2	stalkie_big_nohaplotig	exon	29590012	29590244	98	-	.	Parent=ORF544.mrna1;Target=ORF544 825 1057 +
Chr2	stalkie_big_nohaplotig	exon	29590334	29590454	92	-	.	Parent=ORF544.mrna1;Target=ORF544 704 824 +
Chr2	stalkie_big_nohaplotig	exon	29590517	29590772	95	-	.	Parent=ORF544.mrna1;Target=ORF544 448 703 +
Chr2	stalkie_big_nohaplotig	exon	29688817	29688886	100	-	.	Parent=ORF544.mrna1;Target=ORF544 378 447 +
Chr2	stalkie_big_nohaplotig	exon	29688949	29689117	100	-	.	Parent=ORF544.mrna1;Target=ORF544 209 377 +
Chr2	stalkie_big_nohaplotig	exon	29691498	29691705	99	-	.	Parent=ORF544.mrna1;Target=ORF544 1 208 +
Chr2	stalkie_big_nohaplotig	CDS	29589146	29589326	.	-	1	Parent=ORF544.mrna1;Target=ORF544 1482 1662 +
Chr2	stalkie_big_nohaplotig	CDS	29589392	29589527	.	-	2	Parent=ORF544.mrna1;Target=ORF544 1346 1481 +
Chr2	stalkie_big_nohaplotig	CDS	29589667	29589954	.	-	2	Parent=ORF544.mrna1;Target=ORF544 1058 1345 +
Chr2	stalkie_big_nohaplotig	CDS	29590012	29590244	.	-	1	Parent=ORF544.mrna1;Target=ORF544 825 1057 +
Chr2	stalkie_big_nohaplotig	CDS	29590334	29590454	.	-	2	Parent=ORF544.mrna1;Target=ORF544 704 824 +
Chr2	stalkie_big_nohaplotig	CDS	29590517	29590772	.	-	0	Parent=ORF544.mrna1;Target=ORF544 448 703 +
Chr2	stalkie_big_nohaplotig	CDS	29688817	29688886	.	-	1	Parent=ORF544.mrna1;Target=ORF544 378 447 +
Chr2	stalkie_big_nohaplotig	CDS	29688949	29689117	.	-	2	Parent=ORF544.mrna1;Target=ORF544 209 377 +
Chr2	stalkie_big_nohaplotig	CDS	29691498	29691705	.	-	0	Parent=ORF544.mrna1;Target=ORF544 1 208 +
Chr2	gffcl	locus	29616952	29617904	.	-	.	ID=RLOC_00015952;geneIDs=comp155454_c1_seq1.path1;transcripts=comp155454_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29616952	29617904	.	-	.	ID=comp155454_c1_seq1.mrna1;geneID=comp155454_c1_seq1.path1;Name=comp155454_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=953;mismatches=0;indels=1;unknowns=0;Target=comp155454_c1_seq1 954 1 .;CDS_Target=comp155454_c1_seq1 216 124 .;locus=RLOC_00015952
Chr2	stalkie_big_nohaplotig	exon	29616952	29617904	99	-	.	Parent=comp155454_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	29617689	29617781	.	-	0	Parent=comp155454_c1_seq1.mrna1
Chr2	gffcl	locus	29618367	30528879	.	-	.	ID=RLOC_00015953;geneIDs=FBgn0085399.1.path1;transcripts=FBgn0085399.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29618367	30528879	.	-	.	ID=FBgn0085399.1.mrna1;geneID=FBgn0085399.1.path1;Name=FBgn0085399.1;Dir=sensecoverage=95.7;identity=97.7;matches=2857;mismatches=32;indels=34;unknowns=0;locus=RLOC_00015953
Chr2	stalkie_big_nohaplotig	exon	29618367	29619915	99	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 1698 3246 +
Chr2	stalkie_big_nohaplotig	exon	29630440	29630719	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 1418 1697 +
Chr2	stalkie_big_nohaplotig	exon	29631738	29631892	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 1263 1417 +
Chr2	stalkie_big_nohaplotig	exon	29645623	29645796	99	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 1089 1262 +
Chr2	stalkie_big_nohaplotig	exon	29649413	29649519	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 982 1088 +
Chr2	stalkie_big_nohaplotig	exon	29657786	29657929	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 838 981 +
Chr2	stalkie_big_nohaplotig	exon	29660583	29660817	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 603 837 +
Chr2	stalkie_big_nohaplotig	exon	29661023	29661033	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 561 571 +
Chr2	stalkie_big_nohaplotig	exon	29669371	29669379	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 546 554 +
Chr2	stalkie_big_nohaplotig	exon	29673887	29673889	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 543 545 +
Chr2	stalkie_big_nohaplotig	exon	29679058	29679059	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 541 542 +
Chr2	stalkie_big_nohaplotig	exon	29679065	29679074	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 497 506 +
Chr2	stalkie_big_nohaplotig	exon	29679098	29679105	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 474 481 +
Chr2	stalkie_big_nohaplotig	exon	29693122	29693124	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 471 473 +
Chr2	stalkie_big_nohaplotig	exon	29708568	29708569	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 469 470 +
Chr2	stalkie_big_nohaplotig	exon	30438368	30438375	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 461 468 +
Chr2	stalkie_big_nohaplotig	exon	30445365	30445396	53	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 414 460 +
Chr2	stalkie_big_nohaplotig	exon	30448872	30448932	56	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 344 413 +
Chr2	stalkie_big_nohaplotig	exon	30458684	30458703	70	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 330 343 +
Chr2	stalkie_big_nohaplotig	exon	30464327	30464334	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 316 323 +
Chr2	stalkie_big_nohaplotig	exon	30464768	30464769	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 314 315 +
Chr2	stalkie_big_nohaplotig	exon	30468566	30468572	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 307 313 +
Chr2	stalkie_big_nohaplotig	exon	30475765	30475767	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 304 306 +
Chr2	stalkie_big_nohaplotig	exon	30475786	30475787	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 248 249 +
Chr2	stalkie_big_nohaplotig	exon	30487204	30487215	91	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 196 207 +
Chr2	stalkie_big_nohaplotig	exon	30498799	30498812	85	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 182 195 +
Chr2	stalkie_big_nohaplotig	exon	30501010	30501017	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 174 181 +
Chr2	stalkie_big_nohaplotig	exon	30508957	30508961	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 163 167 +
Chr2	stalkie_big_nohaplotig	exon	30514455	30514462	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 155 162 +
Chr2	stalkie_big_nohaplotig	exon	30517333	30517334	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 153 154 +
Chr2	stalkie_big_nohaplotig	exon	30524663	30524668	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 147 152 +
Chr2	stalkie_big_nohaplotig	exon	30528874	30528879	100	-	.	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 141 146 +
Chr2	stalkie_big_nohaplotig	CDS	29660767	29660817	.	-	1	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 603 653 +
Chr2	stalkie_big_nohaplotig	CDS	29661023	29661030	.	-	0	Parent=FBgn0085399.1.mrna1;Target=FBgn0085399.1 564 571 +
Chr2	gffcl	locus	29671638	29673617	.	+	.	ID=RLOC_00015954;geneIDs=FBgn0263988.1.path1,comp156804_c1_seq1.path1;transcripts=FBgn0263988.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29671638	29673617	.	+	.	ID=FBgn0263988.1.mrna1;geneID=FBgn0263988.1.path1;Name=FBgn0263988.1;Dir=sensecoverage=100.0;identity=99.8;matches=1752;mismatches=3;indels=0;unknowns=0;locus=RLOC_00015954
Chr2	stalkie_big_nohaplotig	exon	29671638	29672965	99	+	.	Parent=FBgn0263988.1.mrna1;Target=FBgn0263988.1 1 1328 +
Chr2	stalkie_big_nohaplotig	exon	29673083	29673295	99	+	.	Parent=FBgn0263988.1.mrna1;Target=FBgn0263988.1 1329 1541 +
Chr2	stalkie_big_nohaplotig	exon	29673404	29673617	100	+	.	Parent=FBgn0263988.1.mrna1;Target=FBgn0263988.1 1542 1755 +
Chr2	stalkie_big_nohaplotig	CDS	29671638	29672965	.	+	0	Parent=FBgn0263988.1.mrna1;Target=FBgn0263988.1 1 1328 +
Chr2	stalkie_big_nohaplotig	CDS	29673083	29673295	.	+	1	Parent=FBgn0263988.1.mrna1;Target=FBgn0263988.1 1329 1541 +
Chr2	stalkie_big_nohaplotig	CDS	29673404	29673617	.	+	1	Parent=FBgn0263988.1.mrna1;Target=FBgn0263988.1 1542 1755 +
Chr2	gffcl	locus	29729144	29733273	.	+	.	ID=RLOC_00015956;geneIDs=FBgn0039665.1.path1;transcripts=FBgn0039665.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29729144	29733273	.	+	.	ID=FBgn0039665.1.mrna1;geneID=FBgn0039665.1.path1;Name=FBgn0039665.1;Dir=sensecoverage=100.0;identity=100.0;matches=813;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015956
Chr2	stalkie_big_nohaplotig	exon	29729144	29729529	100	+	.	Parent=FBgn0039665.1.mrna1;Target=FBgn0039665.1 1 386 +
Chr2	stalkie_big_nohaplotig	exon	29732847	29733273	100	+	.	Parent=FBgn0039665.1.mrna1;Target=FBgn0039665.1 387 813 +
Chr2	stalkie_big_nohaplotig	CDS	29729144	29729529	.	+	0	Parent=FBgn0039665.1.mrna1;Target=FBgn0039665.1 1 386 +
Chr2	stalkie_big_nohaplotig	CDS	29732847	29733273	.	+	1	Parent=FBgn0039665.1.mrna1;Target=FBgn0039665.1 387 813 +
Chr2	gffcl	locus	29733597	29734305	.	+	.	ID=RLOC_00015957;geneIDs=comp148391_c0_seq1.path1;transcripts=comp148391_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29733597	29734305	.	+	.	ID=comp148391_c0_seq1.mrna1;geneID=comp148391_c0_seq1.path1;Name=comp148391_c0_seq1;Dir=indeterminatecoverage=94.3;identity=99.9;matches=708;mismatches=1;indels=0;unknowns=0;Target=comp148391_c0_seq1 713 5 .;CDS_Target=comp148391_c0_seq1 151 5 .;locus=RLOC_00015957
Chr2	stalkie_big_nohaplotig	exon	29733597	29734305	99	+	.	Parent=comp148391_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	29733597	29733743	.	+	0	Parent=comp148391_c0_seq1.mrna1
Chr2	gffcl	locus	29734442	29734755	.	-	.	ID=RLOC_00015958;geneIDs=comp135379_c2_seq1.path1;transcripts=comp135379_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29734442	29734755	.	-	.	ID=comp135379_c2_seq1.mrna1;geneID=comp135379_c2_seq1.path1;Name=comp135379_c2_seq1;Dir=indeterminatecoverage=92.6;identity=99.7;matches=313;mismatches=1;indels=0;unknowns=0;Target=comp135379_c2_seq1 339 26 .;CDS_Target=comp135379_c2_seq1 241 26 .;locus=RLOC_00015958
Chr2	stalkie_big_nohaplotig	exon	29734442	29734755	99	-	.	Parent=comp135379_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	29734540	29734755	.	-	0	Parent=comp135379_c2_seq1.mrna1
Chr2	gffcl	locus	29752393	29754579	.	+	.	ID=RLOC_00015959;geneIDs=ORF1910.path1;transcripts=ORF1910.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29752393	29754579	.	+	.	ID=ORF1910.mrna1;geneID=ORF1910.path1;Name=ORF1910;Dir=sensecoverage=100.0;identity=99.3;matches=956;mismatches=7;indels=0;unknowns=0;locus=RLOC_00015959
Chr2	stalkie_big_nohaplotig	exon	29752393	29752426	100	+	.	Parent=ORF1910.mrna1;Target=ORF1910 1 34 +
Chr2	stalkie_big_nohaplotig	exon	29753651	29754579	99	+	.	Parent=ORF1910.mrna1;Target=ORF1910 35 963 +
Chr2	stalkie_big_nohaplotig	CDS	29752393	29752426	.	+	0	Parent=ORF1910.mrna1;Target=ORF1910 1 34 +
Chr2	stalkie_big_nohaplotig	CDS	29753651	29754579	.	+	2	Parent=ORF1910.mrna1;Target=ORF1910 35 963 +
Chr2	gffcl	locus	29776383	29780053	.	-	.	ID=RLOC_00015960;geneIDs=ORF2117.path1,comp161155_c0_seq1.path1;transcripts=comp161155_c0_seq1.mrna1,ORF2117.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29776383	29780053	.	-	.	ID=comp161155_c0_seq1.mrna1;geneID=comp161155_c0_seq1.path1;Name=comp161155_c0_seq1;Dir=antisensecoverage=100.0;identity=98.1;matches=1561;mismatches=26;indels=4;unknowns=0;locus=RLOC_00015960
Chr2	stalkie_big_nohaplotig	exon	29776383	29776539	84	-	.	Parent=comp161155_c0_seq1.mrna1;Target=comp161155_c0_seq1 1 159 -
Chr2	stalkie_big_nohaplotig	exon	29776690	29776825	100	-	.	Parent=comp161155_c0_seq1.mrna1;Target=comp161155_c0_seq1 160 295 -
Chr2	stalkie_big_nohaplotig	exon	29776886	29777173	99	-	.	Parent=comp161155_c0_seq1.mrna1;Target=comp161155_c0_seq1 296 583 -
Chr2	stalkie_big_nohaplotig	exon	29777232	29777676	99	-	.	Parent=comp161155_c0_seq1.mrna1;Target=comp161155_c0_seq1 584 1029 -
Chr2	stalkie_big_nohaplotig	exon	29778490	29778704	100	-	.	Parent=comp161155_c0_seq1.mrna1;Target=comp161155_c0_seq1 1030 1244 -
Chr2	stalkie_big_nohaplotig	exon	29779646	29779820	100	-	.	Parent=comp161155_c0_seq1.mrna1;Target=comp161155_c0_seq1 1245 1419 -
Chr2	stalkie_big_nohaplotig	exon	29779883	29780053	99	-	.	Parent=comp161155_c0_seq1.mrna1;Target=comp161155_c0_seq1 1420 1591 -
Chr2	stalkie_big_nohaplotig	CDS	29777161	29777173	.	-	2	Parent=comp161155_c0_seq1.mrna1;Target=comp161155_c0_seq1 571 583 .
Chr2	stalkie_big_nohaplotig	CDS	29777232	29777373	.	-	0	Parent=comp161155_c0_seq1.mrna1;Target=comp161155_c0_seq1 584 726 .
Chr2	stalkie_big_nohaplotig	mRNA	29777232	29780015	.	-	.	ID=ORF2117.mrna1;geneID=ORF2117.path1;Name=ORF2117;Dir=sensecoverage=98.9;identity=99.7;matches=902;mismatches=2;indels=1;unknowns=0;locus=RLOC_00015960
Chr2	stalkie_big_nohaplotig	exon	29777232	29777467	99	-	.	Parent=ORF2117.mrna1;Target=ORF2117 669 905 +
Chr2	stalkie_big_nohaplotig	exon	29777532	29777676	99	-	.	Parent=ORF2117.mrna1;Target=ORF2117 524 668 +
Chr2	stalkie_big_nohaplotig	exon	29778490	29778704	100	-	.	Parent=ORF2117.mrna1;Target=ORF2117 309 523 +
Chr2	stalkie_big_nohaplotig	exon	29779646	29779820	100	-	.	Parent=ORF2117.mrna1;Target=ORF2117 134 308 +
Chr2	stalkie_big_nohaplotig	exon	29779883	29780015	100	-	.	Parent=ORF2117.mrna1;Target=ORF2117 1 133 +
Chr2	stalkie_big_nohaplotig	CDS	29777234	29777467	.	-	1	Parent=ORF2117.mrna1;Target=ORF2117 669 903 +
Chr2	stalkie_big_nohaplotig	CDS	29777532	29777676	.	-	2	Parent=ORF2117.mrna1;Target=ORF2117 524 668 +
Chr2	stalkie_big_nohaplotig	CDS	29778490	29778704	.	-	1	Parent=ORF2117.mrna1;Target=ORF2117 309 523 +
Chr2	stalkie_big_nohaplotig	CDS	29779646	29779820	.	-	2	Parent=ORF2117.mrna1;Target=ORF2117 134 308 +
Chr2	stalkie_big_nohaplotig	CDS	29779883	29780015	.	-	0	Parent=ORF2117.mrna1;Target=ORF2117 1 133 +
Chr2	gffcl	locus	29781728	29784144	.	-	.	ID=RLOC_00015961;geneIDs=comp151483_c0_seq1.path1;transcripts=comp151483_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29781728	29784144	.	-	.	ID=comp151483_c0_seq1.mrna1;geneID=comp151483_c0_seq1.path1;Name=comp151483_c0_seq1;Dir=sensecoverage=99.8;identity=99.7;matches=597;mismatches=2;indels=0;unknowns=0;locus=RLOC_00015961
Chr2	stalkie_big_nohaplotig	exon	29781728	29781903	98	-	.	Parent=comp151483_c0_seq1.mrna1;Target=comp151483_c0_seq1 424 599 +
Chr2	stalkie_big_nohaplotig	exon	29783602	29783737	100	-	.	Parent=comp151483_c0_seq1.mrna1;Target=comp151483_c0_seq1 288 423 +
Chr2	stalkie_big_nohaplotig	exon	29783858	29784144	100	-	.	Parent=comp151483_c0_seq1.mrna1;Target=comp151483_c0_seq1 1 287 +
Chr2	stalkie_big_nohaplotig	CDS	29781753	29781903	.	-	1	Parent=comp151483_c0_seq1.mrna1;Target=comp151483_c0_seq1 424 574 +
Chr2	stalkie_big_nohaplotig	CDS	29783602	29783737	.	-	2	Parent=comp151483_c0_seq1.mrna1;Target=comp151483_c0_seq1 288 423 +
Chr2	stalkie_big_nohaplotig	CDS	29783858	29784143	.	-	0	Parent=comp151483_c0_seq1.mrna1;Target=comp151483_c0_seq1 2 287 +
Chr2	gffcl	locus	29789400	29790805	.	-	.	ID=RLOC_00015962;geneIDs=FBgn0026394.path1;transcripts=FBgn0026394.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29789400	29790805	.	-	.	ID=FBgn0026394.mrna1;geneID=FBgn0026394.path1;Name=FBgn0026394;Dir=sensecoverage=99.7;identity=98.8;matches=653;mismatches=8;indels=0;unknowns=0;locus=RLOC_00015962
Chr2	stalkie_big_nohaplotig	exon	29789400	29789447	100	-	.	Parent=FBgn0026394.mrna1;Target=FBgn0026394 616 663 +
Chr2	stalkie_big_nohaplotig	exon	29789514	29789666	98	-	.	Parent=FBgn0026394.mrna1;Target=FBgn0026394 463 615 +
Chr2	stalkie_big_nohaplotig	exon	29789818	29789916	97	-	.	Parent=FBgn0026394.mrna1;Target=FBgn0026394 364 462 +
Chr2	stalkie_big_nohaplotig	exon	29790367	29790539	98	-	.	Parent=FBgn0026394.mrna1;Target=FBgn0026394 191 363 +
Chr2	stalkie_big_nohaplotig	exon	29790618	29790805	99	-	.	Parent=FBgn0026394.mrna1;Target=FBgn0026394 3 190 +
Chr2	stalkie_big_nohaplotig	CDS	29789400	29789447	.	-	0	Parent=FBgn0026394.mrna1;Target=FBgn0026394 616 663 +
Chr2	stalkie_big_nohaplotig	CDS	29789514	29789666	.	-	0	Parent=FBgn0026394.mrna1;Target=FBgn0026394 463 615 +
Chr2	stalkie_big_nohaplotig	CDS	29789818	29789916	.	-	0	Parent=FBgn0026394.mrna1;Target=FBgn0026394 364 462 +
Chr2	stalkie_big_nohaplotig	CDS	29790367	29790539	.	-	2	Parent=FBgn0026394.mrna1;Target=FBgn0026394 191 363 +
Chr2	stalkie_big_nohaplotig	CDS	29790618	29790804	.	-	0	Parent=FBgn0026394.mrna1;Target=FBgn0026394 4 190 +
Chr2	gffcl	locus	29794687	29795446	.	+	.	ID=RLOC_00015963;geneIDs=comp150564_c0_seq1.path1;transcripts=comp150564_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29794687	29795446	.	+	.	ID=comp150564_c0_seq1.mrna1;geneID=comp150564_c0_seq1.path1;Name=comp150564_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=754;mismatches=6;indels=13;unknowns=0;Target=comp150564_c0_seq1 773 1 .;CDS_Target=comp150564_c0_seq1 404 273 .;locus=RLOC_00015963
Chr2	stalkie_big_nohaplotig	exon	29794687	29795446	97	+	.	Parent=comp150564_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	29794946	29795077	.	+	0	Parent=comp150564_c0_seq1.mrna1
Chr2	gffcl	locus	29797521	29806543	.	-	.	ID=RLOC_00015964;geneIDs=FBgn0027101.1.path1;transcripts=FBgn0027101.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29797521	29806543	.	-	.	ID=FBgn0027101.1.mrna1;geneID=FBgn0027101.1.path1;Name=FBgn0027101.1;Dir=sensecoverage=100.0;identity=99.8;matches=5120;mismatches=11;indels=0;unknowns=2;locus=RLOC_00015964
Chr2	stalkie_big_nohaplotig	exon	29797521	29797885	100	-	.	Parent=FBgn0027101.1.mrna1;Target=FBgn0027101.1 4769 5133 +
Chr2	stalkie_big_nohaplotig	exon	29798914	29799036	100	-	.	Parent=FBgn0027101.1.mrna1;Target=FBgn0027101.1 4646 4768 +
Chr2	stalkie_big_nohaplotig	exon	29799094	29799309	99	-	.	Parent=FBgn0027101.1.mrna1;Target=FBgn0027101.1 4430 4645 +
Chr2	stalkie_big_nohaplotig	exon	29799380	29799992	99	-	.	Parent=FBgn0027101.1.mrna1;Target=FBgn0027101.1 3817 4429 +
Chr2	stalkie_big_nohaplotig	exon	29800467	29801461	99	-	.	Parent=FBgn0027101.1.mrna1;Target=FBgn0027101.1 2822 3816 +
Chr2	stalkie_big_nohaplotig	exon	29803723	29806543	99	-	.	Parent=FBgn0027101.1.mrna1;Target=FBgn0027101.1 1 2821 +
Chr2	stalkie_big_nohaplotig	CDS	29797521	29797885	.	-	2	Parent=FBgn0027101.1.mrna1;Target=FBgn0027101.1 4769 5133 +
Chr2	stalkie_big_nohaplotig	CDS	29798914	29799036	.	-	2	Parent=FBgn0027101.1.mrna1;Target=FBgn0027101.1 4646 4768 +
Chr2	stalkie_big_nohaplotig	CDS	29799094	29799309	.	-	2	Parent=FBgn0027101.1.mrna1;Target=FBgn0027101.1 4430 4645 +
Chr2	stalkie_big_nohaplotig	CDS	29799380	29799992	.	-	0	Parent=FBgn0027101.1.mrna1;Target=FBgn0027101.1 3817 4429 +
Chr2	stalkie_big_nohaplotig	CDS	29800467	29801461	.	-	2	Parent=FBgn0027101.1.mrna1;Target=FBgn0027101.1 2822 3816 +
Chr2	stalkie_big_nohaplotig	CDS	29803723	29806543	.	-	0	Parent=FBgn0027101.1.mrna1;Target=FBgn0027101.1 1 2821 +
Chr2	gffcl	locus	29806559	29808714	.	-	.	ID=RLOC_00015965;geneIDs=comp123076_c0_seq1.path1;transcripts=comp123076_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29806559	29808714	.	-	.	ID=comp123076_c0_seq1.mrna1;geneID=comp123076_c0_seq1.path1;Name=comp123076_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=299;mismatches=0;indels=0;unknowns=0;Target=comp123076_c0_seq1 194 298 .;locus=RLOC_00015965
Chr2	stalkie_big_nohaplotig	exon	29806559	29806582	100	-	.	Parent=comp123076_c0_seq1.mrna1;Target=comp123076_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	exon	29808440	29808714	100	-	.	Parent=comp123076_c0_seq1.mrna1;Target=comp123076_c0_seq1 25 299 -
Chr2	stalkie_big_nohaplotig	CDS	29808609	29808713	.	-	0	Parent=comp123076_c0_seq1.mrna1
Chr2	gffcl	locus	29818133	29818465	.	-	.	ID=RLOC_00015966;geneIDs=comp142251_c1_seq1.path1;transcripts=comp142251_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29818133	29818465	.	-	.	ID=comp142251_c1_seq1.mrna1;geneID=comp142251_c1_seq1.path1;Name=comp142251_c1_seq1;Dir=indeterminatecoverage=34.5;identity=96.4;matches=321;mismatches=12;indels=0;unknowns=0;Target=comp142251_c1_seq1 333 1 .;CDS_Target=comp142251_c1_seq1 333 57 .;locus=RLOC_00015966
Chr2	stalkie_big_nohaplotig	exon	29818133	29818465	96	-	.	Parent=comp142251_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	29818133	29818409	.	-	0	Parent=comp142251_c1_seq1.mrna1
Chr2	gffcl	locus	29831283	29832386	.	-	.	ID=RLOC_00015967;geneIDs=comp53875_c0_seq1.path1;transcripts=comp53875_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29831283	29832386	.	-	.	ID=comp53875_c0_seq1.mrna1;geneID=comp53875_c0_seq1.path1;Name=comp53875_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.7;matches=1101;mismatches=3;indels=0;unknowns=0;Target=comp53875_c0_seq1 1106 3 .;CDS_Target=comp53875_c0_seq1 284 114 .;locus=RLOC_00015967
Chr2	stalkie_big_nohaplotig	exon	29831283	29832386	99	-	.	Parent=comp53875_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	29832105	29832275	.	-	0	Parent=comp53875_c0_seq1.mrna1
Chr2	gffcl	locus	29833644	29841760	.	-	.	ID=RLOC_00015968;geneIDs=FBgn0034674.1.path1;transcripts=FBgn0034674.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29833644	29841760	.	-	.	ID=FBgn0034674.1.mrna1;geneID=FBgn0034674.1.path1;Name=FBgn0034674.1;Dir=sensecoverage=100.0;identity=99.8;matches=1742;mismatches=4;indels=0;unknowns=0;locus=RLOC_00015968
Chr2	stalkie_big_nohaplotig	exon	29833644	29833921	100	-	.	Parent=FBgn0034674.1.mrna1;Target=FBgn0034674.1 1469 1746 +
Chr2	stalkie_big_nohaplotig	exon	29833996	29834285	100	-	.	Parent=FBgn0034674.1.mrna1;Target=FBgn0034674.1 1179 1468 +
Chr2	stalkie_big_nohaplotig	exon	29834562	29834632	100	-	.	Parent=FBgn0034674.1.mrna1;Target=FBgn0034674.1 1108 1178 +
Chr2	stalkie_big_nohaplotig	exon	29834705	29834848	100	-	.	Parent=FBgn0034674.1.mrna1;Target=FBgn0034674.1 964 1107 +
Chr2	stalkie_big_nohaplotig	exon	29834908	29835370	100	-	.	Parent=FBgn0034674.1.mrna1;Target=FBgn0034674.1 501 963 +
Chr2	stalkie_big_nohaplotig	exon	29841261	29841760	99	-	.	Parent=FBgn0034674.1.mrna1;Target=FBgn0034674.1 1 500 +
Chr2	stalkie_big_nohaplotig	CDS	29833644	29833921	.	-	2	Parent=FBgn0034674.1.mrna1;Target=FBgn0034674.1 1469 1746 +
Chr2	stalkie_big_nohaplotig	CDS	29833996	29834285	.	-	1	Parent=FBgn0034674.1.mrna1;Target=FBgn0034674.1 1179 1468 +
Chr2	stalkie_big_nohaplotig	CDS	29834562	29834632	.	-	0	Parent=FBgn0034674.1.mrna1;Target=FBgn0034674.1 1108 1178 +
Chr2	stalkie_big_nohaplotig	CDS	29834705	29834848	.	-	0	Parent=FBgn0034674.1.mrna1;Target=FBgn0034674.1 964 1107 +
Chr2	stalkie_big_nohaplotig	CDS	29834908	29835370	.	-	1	Parent=FBgn0034674.1.mrna1;Target=FBgn0034674.1 501 963 +
Chr2	stalkie_big_nohaplotig	CDS	29841261	29841760	.	-	0	Parent=FBgn0034674.1.mrna1;Target=FBgn0034674.1 1 500 +
Chr2	gffcl	locus	29837787	29838232	.	+	.	ID=RLOC_00015969;geneIDs=FBgn0023495.2.path1;transcripts=FBgn0023495.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29837787	29838232	.	+	.	ID=FBgn0023495.2.mrna1;geneID=FBgn0023495.2.path1;Name=FBgn0023495.2;Dir=sensecoverage=29.0;identity=98.4;matches=358;mismatches=6;indels=0;unknowns=0;locus=RLOC_00015969
Chr2	stalkie_big_nohaplotig	exon	29837787	29837930	98	+	.	Parent=FBgn0023495.2.mrna1;Target=FBgn0023495.2 1 144 +
Chr2	stalkie_big_nohaplotig	exon	29838013	29838232	98	+	.	Parent=FBgn0023495.2.mrna1;Target=FBgn0023495.2 145 364 +
Chr2	stalkie_big_nohaplotig	CDS	29837787	29837930	.	+	0	Parent=FBgn0023495.2.mrna1;Target=FBgn0023495.2 1 144 +
Chr2	stalkie_big_nohaplotig	CDS	29838013	29838232	.	+	0	Parent=FBgn0023495.2.mrna1;Target=FBgn0023495.2 145 364 +
Chr2	gffcl	locus	29850524	29851929	.	-	.	ID=RLOC_00015970;geneIDs=ORF905.path1;transcripts=ORF905.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29850524	29851929	.	-	.	ID=ORF905.mrna1;geneID=ORF905.path1;Name=ORF905;Dir=sensecoverage=100.0;identity=99.1;matches=1341;mismatches=12;indels=0;unknowns=0;locus=RLOC_00015970
Chr2	stalkie_big_nohaplotig	exon	29850524	29851853	99	-	.	Parent=ORF905.mrna1;Target=ORF905 24 1353 +
Chr2	stalkie_big_nohaplotig	exon	29851907	29851929	100	-	.	Parent=ORF905.mrna1;Target=ORF905 1 23 +
Chr2	stalkie_big_nohaplotig	CDS	29850524	29851853	.	-	1	Parent=ORF905.mrna1;Target=ORF905 24 1353 +
Chr2	stalkie_big_nohaplotig	CDS	29851907	29851929	.	-	0	Parent=ORF905.mrna1;Target=ORF905 1 23 +
Chr2	gffcl	locus	29931918	29932960	.	+	.	ID=RLOC_00015972;geneIDs=comp144232_c0_seq1.path2;transcripts=comp144232_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	29931918	29932960	.	+	.	ID=comp144232_c0_seq1.mrna2;geneID=comp144232_c0_seq1.path2;Name=comp144232_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=1028;mismatches=13;indels=2;unknowns=0;Target=comp144232_c0_seq1 1041 1 .;CDS_Target=comp144232_c0_seq1 873 691 .;locus=RLOC_00015972
Chr2	stalkie_big_nohaplotig	exon	29931918	29932960	98	+	.	Parent=comp144232_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	29932610	29932792	.	+	0	Parent=comp144232_c0_seq1.mrna2
Chr2	gffcl	locus	29939548	29940196	.	+	.	ID=RLOC_00015973;geneIDs=comp115045_c0_seq1.path1;transcripts=comp115045_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29939548	29940196	.	+	.	ID=comp115045_c0_seq1.mrna1;geneID=comp115045_c0_seq1.path1;Name=comp115045_c0_seq1;Dir=sensecoverage=99.8;identity=99.8;matches=586;mismatches=1;indels=0;unknowns=0;Target=comp115045_c0_seq1 289 375 +;locus=RLOC_00015973
Chr2	stalkie_big_nohaplotig	exon	29939548	29939642	100	+	.	Parent=comp115045_c0_seq1.mrna1;Target=comp115045_c0_seq1 2 96 +
Chr2	stalkie_big_nohaplotig	exon	29939705	29940196	99	+	.	Parent=comp115045_c0_seq1.mrna1;Target=comp115045_c0_seq1 97 588 +
Chr2	stalkie_big_nohaplotig	CDS	29939897	29939983	.	+	0	Parent=comp115045_c0_seq1.mrna1
Chr2	gffcl	locus	29994905	29995814	.	+	.	ID=RLOC_00015974;geneIDs=comp153528_c1_seq1.path1;transcripts=comp153528_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	29994905	29995814	.	+	.	ID=comp153528_c1_seq1.mrna1;geneID=comp153528_c1_seq1.path1;Name=comp153528_c1_seq1;Dir=indeterminatecoverage=98.7;identity=97.7;matches=889;mismatches=21;indels=0;unknowns=0;Target=comp153528_c1_seq1 910 1 .;CDS_Target=comp153528_c1_seq1 828 721 .;locus=RLOC_00015974
Chr2	stalkie_big_nohaplotig	exon	29994905	29995814	97	+	.	Parent=comp153528_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	29995625	29995732	.	+	0	Parent=comp153528_c1_seq1.mrna1
Chr2	gffcl	locus	30167487	30169063	.	+	.	ID=RLOC_00015977;geneIDs=FBgn0033978.3.path1;transcripts=FBgn0033978.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30167487	30169063	.	+	.	ID=FBgn0033978.3.mrna1;geneID=FBgn0033978.3.path1;Name=FBgn0033978.3;Dir=sensecoverage=99.9;identity=97.8;matches=1478;mismatches=33;indels=0;unknowns=0;locus=RLOC_00015977
Chr2	stalkie_big_nohaplotig	exon	30167487	30168584	96	+	.	Parent=FBgn0033978.3.mrna1;Target=FBgn0033978.3 2 1099 +
Chr2	stalkie_big_nohaplotig	exon	30168651	30169063	100	+	.	Parent=FBgn0033978.3.mrna1;Target=FBgn0033978.3 1100 1512 +
Chr2	stalkie_big_nohaplotig	CDS	30167489	30168584	.	+	0	Parent=FBgn0033978.3.mrna1;Target=FBgn0033978.3 4 1099 +
Chr2	stalkie_big_nohaplotig	CDS	30168651	30169063	.	+	2	Parent=FBgn0033978.3.mrna1;Target=FBgn0033978.3 1100 1512 +
Chr2	gffcl	locus	30201544	30202960	.	+	.	ID=RLOC_00015978;geneIDs=comp153453_c0_seq1.path1;transcripts=comp153453_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30201544	30202960	.	+	.	ID=comp153453_c0_seq1.mrna1;geneID=comp153453_c0_seq1.path1;Name=comp153453_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1413;mismatches=4;indels=2;unknowns=0;Target=comp153453_c0_seq1 1419 1 .;CDS_Target=comp153453_c0_seq1 1417 1262 .;locus=RLOC_00015978
Chr2	stalkie_big_nohaplotig	exon	30201544	30202960	99	+	.	Parent=comp153453_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	30202803	30202958	.	+	0	Parent=comp153453_c0_seq1.mrna1
Chr2	gffcl	locus	30224048	30230238	.	-	.	ID=RLOC_00015979;geneIDs=FBgn0033942.1.path2;transcripts=FBgn0033942.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	30224048	30230238	.	-	.	ID=FBgn0033942.1.mrna2;geneID=FBgn0033942.1.path2;Name=FBgn0033942.1;Dir=sensecoverage=100.0;identity=100.0;matches=390;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015979
Chr2	stalkie_big_nohaplotig	exon	30224048	30224416	100	-	.	Parent=FBgn0033942.1.mrna2;Target=FBgn0033942.1 22 390 +
Chr2	stalkie_big_nohaplotig	exon	30230218	30230238	100	-	.	Parent=FBgn0033942.1.mrna2;Target=FBgn0033942.1 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	30224048	30224416	.	-	0	Parent=FBgn0033942.1.mrna2;Target=FBgn0033942.1 22 390 +
Chr2	stalkie_big_nohaplotig	CDS	30230218	30230238	.	-	0	Parent=FBgn0033942.1.mrna2;Target=FBgn0033942.1 1 21 +
Chr2	gffcl	locus	30227167	30230079	.	+	.	ID=RLOC_00015980;geneIDs=FBgn0050197.1.path2;transcripts=FBgn0050197.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	30227167	30230079	.	+	.	ID=FBgn0050197.1.mrna2;geneID=FBgn0050197.1.path2;Name=FBgn0050197.1;Dir=sensecoverage=100.0;identity=99.7;matches=356;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015980
Chr2	stalkie_big_nohaplotig	exon	30227167	30227191	100	+	.	Parent=FBgn0050197.1.mrna2;Target=FBgn0050197.1 1 25 +
Chr2	stalkie_big_nohaplotig	exon	30227292	30227351	100	+	.	Parent=FBgn0050197.1.mrna2;Target=FBgn0050197.1 26 85 +
Chr2	stalkie_big_nohaplotig	exon	30227429	30227602	100	+	.	Parent=FBgn0050197.1.mrna2;Target=FBgn0050197.1 86 259 +
Chr2	stalkie_big_nohaplotig	exon	30229982	30230079	98	+	.	Parent=FBgn0050197.1.mrna2;Target=FBgn0050197.1 260 357 +
Chr2	stalkie_big_nohaplotig	CDS	30227167	30227191	.	+	0	Parent=FBgn0050197.1.mrna2;Target=FBgn0050197.1 1 25 +
Chr2	stalkie_big_nohaplotig	CDS	30227292	30227351	.	+	2	Parent=FBgn0050197.1.mrna2;Target=FBgn0050197.1 26 85 +
Chr2	stalkie_big_nohaplotig	CDS	30227429	30227602	.	+	2	Parent=FBgn0050197.1.mrna2;Target=FBgn0050197.1 86 259 +
Chr2	stalkie_big_nohaplotig	CDS	30229982	30230079	.	+	2	Parent=FBgn0050197.1.mrna2;Target=FBgn0050197.1 260 357 +
Chr2	gffcl	locus	30235063	30235326	.	-	.	ID=RLOC_00015981;geneIDs=AGAP008212.path1;transcripts=AGAP008212.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30235063	30235326	.	-	.	ID=AGAP008212.mrna1;geneID=AGAP008212.path1;Name=AGAP008212;Dir=indeterminatecoverage=100.0;identity=100.0;matches=264;mismatches=0;indels=0;unknowns=0;Target=AGAP008212 264 1 .;locus=RLOC_00015981
Chr2	stalkie_big_nohaplotig	exon	30235063	30235326	100	-	.	Parent=AGAP008212.mrna1
Chr2	stalkie_big_nohaplotig	CDS	30235063	30235326	.	-	0	Parent=AGAP008212.mrna1
Chr2	gffcl	locus	30235992	30236356	.	+	.	ID=RLOC_00015982;geneIDs=comp78027_c0_seq1.path1;transcripts=comp78027_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30235992	30236356	.	+	.	ID=comp78027_c0_seq1.mrna1;geneID=comp78027_c0_seq1.path1;Name=comp78027_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.5;matches=363;mismatches=2;indels=0;unknowns=0;Target=comp78027_c0_seq1 365 1 .;CDS_Target=comp78027_c0_seq1 298 182 .;locus=RLOC_00015982
Chr2	stalkie_big_nohaplotig	exon	30235992	30236356	99	+	.	Parent=comp78027_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	30236173	30236289	.	+	0	Parent=comp78027_c0_seq1.mrna1
Chr2	gffcl	locus	30271736	30277763	.	+	.	ID=RLOC_00015984;geneIDs=FBgn0033942.1.path1;transcripts=FBgn0033942.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30271736	30277763	.	+	.	ID=FBgn0033942.1.mrna1;geneID=FBgn0033942.1.path1;Name=FBgn0033942.1;Dir=sensecoverage=100.0;identity=100.0;matches=390;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015984
Chr2	stalkie_big_nohaplotig	exon	30271736	30271756	100	+	.	Parent=FBgn0033942.1.mrna1;Target=FBgn0033942.1 1 21 +
Chr2	stalkie_big_nohaplotig	exon	30277395	30277763	100	+	.	Parent=FBgn0033942.1.mrna1;Target=FBgn0033942.1 22 390 +
Chr2	stalkie_big_nohaplotig	CDS	30271736	30271756	.	+	0	Parent=FBgn0033942.1.mrna1;Target=FBgn0033942.1 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	30277395	30277763	.	+	0	Parent=FBgn0033942.1.mrna1;Target=FBgn0033942.1 22 390 +
Chr2	gffcl	locus	30271895	30274573	.	-	.	ID=RLOC_00015985;geneIDs=FBgn0050197.1.path1;transcripts=FBgn0050197.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30271895	30274573	.	-	.	ID=FBgn0050197.1.mrna1;geneID=FBgn0050197.1.path1;Name=FBgn0050197.1;Dir=sensecoverage=100.0;identity=99.7;matches=356;mismatches=1;indels=0;unknowns=0;locus=RLOC_00015985
Chr2	stalkie_big_nohaplotig	exon	30271895	30271992	98	-	.	Parent=FBgn0050197.1.mrna1;Target=FBgn0050197.1 260 357 +
Chr2	stalkie_big_nohaplotig	exon	30274138	30274311	100	-	.	Parent=FBgn0050197.1.mrna1;Target=FBgn0050197.1 86 259 +
Chr2	stalkie_big_nohaplotig	exon	30274389	30274448	100	-	.	Parent=FBgn0050197.1.mrna1;Target=FBgn0050197.1 26 85 +
Chr2	stalkie_big_nohaplotig	exon	30274549	30274573	100	-	.	Parent=FBgn0050197.1.mrna1;Target=FBgn0050197.1 1 25 +
Chr2	stalkie_big_nohaplotig	CDS	30271895	30271992	.	-	2	Parent=FBgn0050197.1.mrna1;Target=FBgn0050197.1 260 357 +
Chr2	stalkie_big_nohaplotig	CDS	30274138	30274311	.	-	2	Parent=FBgn0050197.1.mrna1;Target=FBgn0050197.1 86 259 +
Chr2	stalkie_big_nohaplotig	CDS	30274389	30274448	.	-	2	Parent=FBgn0050197.1.mrna1;Target=FBgn0050197.1 26 85 +
Chr2	stalkie_big_nohaplotig	CDS	30274549	30274573	.	-	0	Parent=FBgn0050197.1.mrna1;Target=FBgn0050197.1 1 25 +
Chr2	gffcl	locus	30291249	30291874	.	+	.	ID=RLOC_00015986;geneIDs=comp135356_c0_seq1.path1;transcripts=comp135356_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30291249	30291874	.	+	.	ID=comp135356_c0_seq1.mrna1;geneID=comp135356_c0_seq1.path1;Name=comp135356_c0_seq1;Dir=antisensecoverage=99.5;identity=99.3;matches=554;mismatches=4;indels=0;unknowns=0;locus=RLOC_00015986
Chr2	stalkie_big_nohaplotig	exon	30291249	30291438	98	+	.	Parent=comp135356_c0_seq1.mrna1;Target=comp135356_c0_seq1 371 560 -
Chr2	stalkie_big_nohaplotig	exon	30291507	30291874	99	+	.	Parent=comp135356_c0_seq1.mrna1;Target=comp135356_c0_seq1 3 370 -
Chr2	stalkie_big_nohaplotig	CDS	30291343	30291438	.	+	0	Parent=comp135356_c0_seq1.mrna1;Target=comp135356_c0_seq1 371 466 .
Chr2	stalkie_big_nohaplotig	CDS	30291507	30291725	.	+	0	Parent=comp135356_c0_seq1.mrna1;Target=comp135356_c0_seq1 152 370 .
Chr2	gffcl	locus	30294320	30296384	.	-	.	ID=RLOC_00015987;geneIDs=FBgn0052792.1.path1;transcripts=FBgn0052792.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30294320	30296384	.	-	.	ID=FBgn0052792.1.mrna1;geneID=FBgn0052792.1.path1;Name=FBgn0052792.1;Dir=sensecoverage=100.0;identity=98.8;matches=1683;mismatches=21;indels=0;unknowns=0;locus=RLOC_00015987
Chr2	stalkie_big_nohaplotig	exon	30294320	30294546	98	-	.	Parent=FBgn0052792.1.mrna1;Target=FBgn0052792.1 1478 1704 +
Chr2	stalkie_big_nohaplotig	exon	30294606	30295396	98	-	.	Parent=FBgn0052792.1.mrna1;Target=FBgn0052792.1 687 1477 +
Chr2	stalkie_big_nohaplotig	exon	30295451	30295599	98	-	.	Parent=FBgn0052792.1.mrna1;Target=FBgn0052792.1 538 686 +
Chr2	stalkie_big_nohaplotig	exon	30295665	30295773	100	-	.	Parent=FBgn0052792.1.mrna1;Target=FBgn0052792.1 429 537 +
Chr2	stalkie_big_nohaplotig	exon	30295899	30296099	99	-	.	Parent=FBgn0052792.1.mrna1;Target=FBgn0052792.1 228 428 +
Chr2	stalkie_big_nohaplotig	exon	30296158	30296384	98	-	.	Parent=FBgn0052792.1.mrna1;Target=FBgn0052792.1 1 227 +
Chr2	stalkie_big_nohaplotig	CDS	30294320	30294546	.	-	2	Parent=FBgn0052792.1.mrna1;Target=FBgn0052792.1 1478 1704 +
Chr2	stalkie_big_nohaplotig	CDS	30294606	30295396	.	-	1	Parent=FBgn0052792.1.mrna1;Target=FBgn0052792.1 687 1477 +
Chr2	stalkie_big_nohaplotig	CDS	30295451	30295599	.	-	0	Parent=FBgn0052792.1.mrna1;Target=FBgn0052792.1 538 686 +
Chr2	stalkie_big_nohaplotig	CDS	30295665	30295773	.	-	1	Parent=FBgn0052792.1.mrna1;Target=FBgn0052792.1 429 537 +
Chr2	stalkie_big_nohaplotig	CDS	30295899	30296099	.	-	1	Parent=FBgn0052792.1.mrna1;Target=FBgn0052792.1 228 428 +
Chr2	stalkie_big_nohaplotig	CDS	30296158	30296384	.	-	0	Parent=FBgn0052792.1.mrna1;Target=FBgn0052792.1 1 227 +
Chr2	gffcl	locus	30315424	30315676	.	+	.	ID=RLOC_00015988;geneIDs=comp135492_c0_seq1.path2;transcripts=comp135492_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	30315424	30315676	.	+	.	ID=comp135492_c0_seq1.mrna2;geneID=comp135492_c0_seq1.path2;Name=comp135492_c0_seq1;Dir=indeterminatecoverage=67.7;identity=96.0;matches=243;mismatches=8;indels=2;unknowns=0;Target=comp135492_c0_seq1 368 118 .;CDS_Target=comp135492_c0_seq1 367 293 .;locus=RLOC_00015988
Chr2	stalkie_big_nohaplotig	exon	30315424	30315676	96	+	.	Parent=comp135492_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	30315601	30315675	.	+	2	Parent=comp135492_c0_seq1.mrna2
Chr2	gffcl	locus	30333354	30334433	.	-	.	ID=RLOC_00015989;geneIDs=ORF2818.path1;transcripts=ORF2818.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30333354	30334433	.	-	.	ID=ORF2818.mrna1;geneID=ORF2818.path1;Name=ORF2818;Dir=sensecoverage=100.0;identity=97.6;matches=782;mismatches=19;indels=0;unknowns=0;locus=RLOC_00015989
Chr2	stalkie_big_nohaplotig	exon	30333354	30333457	95	-	.	Parent=ORF2818.mrna1;Target=ORF2818 698 801 +
Chr2	stalkie_big_nohaplotig	exon	30333574	30333656	98	-	.	Parent=ORF2818.mrna1;Target=ORF2818 615 697 +
Chr2	stalkie_big_nohaplotig	exon	30333723	30334258	98	-	.	Parent=ORF2818.mrna1;Target=ORF2818 79 614 +
Chr2	stalkie_big_nohaplotig	exon	30334356	30334433	96	-	.	Parent=ORF2818.mrna1;Target=ORF2818 1 78 +
Chr2	stalkie_big_nohaplotig	CDS	30333354	30333457	.	-	2	Parent=ORF2818.mrna1;Target=ORF2818 698 801 +
Chr2	stalkie_big_nohaplotig	CDS	30333574	30333656	.	-	1	Parent=ORF2818.mrna1;Target=ORF2818 615 697 +
Chr2	stalkie_big_nohaplotig	CDS	30333723	30334258	.	-	0	Parent=ORF2818.mrna1;Target=ORF2818 79 614 +
Chr2	stalkie_big_nohaplotig	CDS	30334356	30334433	.	-	0	Parent=ORF2818.mrna1;Target=ORF2818 1 78 +
Chr2	gffcl	locus	30349759	30350890	.	-	.	ID=RLOC_00015990;geneIDs=FBgn0035359.1.path1;transcripts=FBgn0035359.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30349759	30350890	.	-	.	ID=FBgn0035359.1.mrna1;geneID=FBgn0035359.1.path1;Name=FBgn0035359.1;Dir=sensecoverage=100.0;identity=100.0;matches=1062;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015990
Chr2	stalkie_big_nohaplotig	exon	30349759	30350757	100	-	.	Parent=FBgn0035359.1.mrna1;Target=FBgn0035359.1 64 1062 +
Chr2	stalkie_big_nohaplotig	exon	30350828	30350890	100	-	.	Parent=FBgn0035359.1.mrna1;Target=FBgn0035359.1 1 63 +
Chr2	stalkie_big_nohaplotig	CDS	30349759	30350757	.	-	0	Parent=FBgn0035359.1.mrna1;Target=FBgn0035359.1 64 1062 +
Chr2	stalkie_big_nohaplotig	CDS	30350828	30350890	.	-	0	Parent=FBgn0035359.1.mrna1;Target=FBgn0035359.1 1 63 +
Chr2	gffcl	locus	30354494	30359814	.	+	.	ID=RLOC_00015991;geneIDs=comp135403_c0_seq1.path1,comp135492_c0_seq1.path1;transcripts=comp135492_c0_seq1.mrna1,comp135403_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30354494	30358868	.	+	.	ID=comp135492_c0_seq1.mrna1;geneID=comp135492_c0_seq1.path1;Name=comp135492_c0_seq1;Dir=antisensecoverage=31.5;identity=100.0;matches=117;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015991
Chr2	stalkie_big_nohaplotig	exon	30354494	30354587	100	+	.	Parent=comp135492_c0_seq1.mrna1;Target=comp135492_c0_seq1 24 117 -
Chr2	stalkie_big_nohaplotig	exon	30358846	30358868	100	+	.	Parent=comp135492_c0_seq1.mrna1;Target=comp135492_c0_seq1 1 23 -
Chr2	stalkie_big_nohaplotig	mRNA	30358644	30359814	.	+	.	ID=comp135403_c0_seq1.mrna1;geneID=comp135403_c0_seq1.path1;Name=comp135403_c0_seq1;Dir=sensecoverage=98.1;identity=99.0;matches=1107;mismatches=11;indels=0;unknowns=0;Target=comp135403_c0_seq1 171 752 +;locus=RLOC_00015991
Chr2	stalkie_big_nohaplotig	exon	30358644	30358792	100	+	.	Parent=comp135403_c0_seq1.mrna1;Target=comp135403_c0_seq1 5 153 +
Chr2	stalkie_big_nohaplotig	exon	30358846	30359814	98	+	.	Parent=comp135403_c0_seq1.mrna1;Target=comp135403_c0_seq1 154 1122 +
Chr2	stalkie_big_nohaplotig	CDS	30358863	30359444	.	+	0	Parent=comp135403_c0_seq1.mrna1
Chr2	gffcl	locus	30376099	30376670	.	+	.	ID=RLOC_00015992;geneIDs=comp136243_c0_seq1.path1;transcripts=comp136243_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30376099	30376670	.	+	.	ID=comp136243_c0_seq1.mrna1;geneID=comp136243_c0_seq1.path1;Name=comp136243_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=572;mismatches=0;indels=0;unknowns=0;Target=comp136243_c0_seq1 572 1 .;CDS_Target=comp136243_c0_seq1 258 169 .;locus=RLOC_00015992
Chr2	stalkie_big_nohaplotig	exon	30376099	30376670	100	+	.	Parent=comp136243_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	30376267	30376356	.	+	0	Parent=comp136243_c0_seq1.mrna1
Chr2	gffcl	locus	30380750	30382291	.	-	.	ID=RLOC_00015993;geneIDs=ORF673.path1;transcripts=ORF673.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30380750	30382291	.	-	.	ID=ORF673.mrna1;geneID=ORF673.path1;Name=ORF673;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1542;mismatches=0;indels=0;unknowns=0;Target=ORF673 1542 1 .;locus=RLOC_00015993
Chr2	stalkie_big_nohaplotig	exon	30380750	30382291	100	-	.	Parent=ORF673.mrna1
Chr2	stalkie_big_nohaplotig	CDS	30380750	30382291	.	-	0	Parent=ORF673.mrna1
Chr2	gffcl	locus	30400913	30402796	.	+	.	ID=RLOC_00015994;geneIDs=ORF471.path1;transcripts=ORF471.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30400913	30402796	.	+	.	ID=ORF471.mrna1;geneID=ORF471.path1;Name=ORF471;Dir=sensecoverage=100.0;identity=100.0;matches=1767;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015994
Chr2	stalkie_big_nohaplotig	exon	30400913	30401177	100	+	.	Parent=ORF471.mrna1;Target=ORF471 1 265 +
Chr2	stalkie_big_nohaplotig	exon	30401238	30401401	100	+	.	Parent=ORF471.mrna1;Target=ORF471 266 429 +
Chr2	stalkie_big_nohaplotig	exon	30401459	30402796	100	+	.	Parent=ORF471.mrna1;Target=ORF471 430 1767 +
Chr2	stalkie_big_nohaplotig	CDS	30400913	30401177	.	+	0	Parent=ORF471.mrna1;Target=ORF471 1 265 +
Chr2	stalkie_big_nohaplotig	CDS	30401238	30401401	.	+	2	Parent=ORF471.mrna1;Target=ORF471 266 429 +
Chr2	stalkie_big_nohaplotig	CDS	30401459	30402796	.	+	0	Parent=ORF471.mrna1;Target=ORF471 430 1767 +
Chr2	gffcl	locus	30408414	31627810	.	-	.	ID=RLOC_00015995;geneIDs=FBgn0003889.5.path1;transcripts=FBgn0003889.5.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30408414	31627810	.	-	.	ID=FBgn0003889.5.mrna1;geneID=FBgn0003889.5.path1;Name=FBgn0003889.5;Dir=sensecoverage=84.7;identity=92.6;matches=976;mismatches=77;indels=1;unknowns=0;locus=RLOC_00015995
Chr2	stalkie_big_nohaplotig	exon	30408414	30408417	75	-	.	Parent=FBgn0003889.5.mrna1;Target=FBgn0003889.5 1052 1055 +
Chr2	stalkie_big_nohaplotig	exon	30422725	30422732	100	-	.	Parent=FBgn0003889.5.mrna1;Target=FBgn0003889.5 1044 1051 +
Chr2	stalkie_big_nohaplotig	exon	30424762	30424764	100	-	.	Parent=FBgn0003889.5.mrna1;Target=FBgn0003889.5 1041 1043 +
Chr2	stalkie_big_nohaplotig	exon	31625988	31626606	88	-	.	Parent=FBgn0003889.5.mrna1;Target=FBgn0003889.5 421 1039 +
Chr2	stalkie_big_nohaplotig	exon	31627392	31627810	98	-	.	Parent=FBgn0003889.5.mrna1;Target=FBgn0003889.5 1 420 +
Chr2	stalkie_big_nohaplotig	CDS	30408414	30408417	.	-	0	Parent=FBgn0003889.5.mrna1;Target=FBgn0003889.5 1052 1055 +
Chr2	stalkie_big_nohaplotig	CDS	30422725	30422732	.	-	2	Parent=FBgn0003889.5.mrna1;Target=FBgn0003889.5 1044 1051 +
Chr2	stalkie_big_nohaplotig	CDS	30424762	30424764	.	-	2	Parent=FBgn0003889.5.mrna1;Target=FBgn0003889.5 1041 1043 +
Chr2	stalkie_big_nohaplotig	CDS	31625988	31626606	.	-	0	Parent=FBgn0003889.5.mrna1;Target=FBgn0003889.5 421 1039 +
Chr2	stalkie_big_nohaplotig	CDS	31627392	31627784	.	-	0	Parent=FBgn0003889.5.mrna1;Target=FBgn0003889.5 28 420 +
Chr2	gffcl	locus	30408959	30409866	.	+	.	ID=RLOC_00015996;geneIDs=comp160692_c0_seq1.path1;transcripts=comp160692_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30408959	30409866	.	+	.	ID=comp160692_c0_seq1.mrna1;geneID=comp160692_c0_seq1.path1;Name=comp160692_c0_seq1;Dir=indeterminatecoverage=94.3;identity=88.8;matches=842;mismatches=57;indels=49;unknowns=0;Target=comp160692_c0_seq1 958 20 .;CDS_Target=comp160692_c0_seq1 451 20 .;locus=RLOC_00015996
Chr2	stalkie_big_nohaplotig	exon	30408959	30409866	88	+	.	Parent=comp160692_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	30408959	30409390	.	+	0	Parent=comp160692_c0_seq1.mrna1
Chr2	gffcl	locus	30413659	30414484	.	+	.	ID=RLOC_00015997;geneIDs=FBgn0035358.1.path1;transcripts=FBgn0035358.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30413659	30414484	.	+	.	ID=FBgn0035358.1.mrna1;geneID=FBgn0035358.1.path1;Name=FBgn0035358.1;Dir=sensecoverage=100.0;identity=100.0;matches=627;mismatches=0;indels=0;unknowns=0;locus=RLOC_00015997
Chr2	stalkie_big_nohaplotig	exon	30413659	30413816	100	+	.	Parent=FBgn0035358.1.mrna1;Target=FBgn0035358.1 1 158 +
Chr2	stalkie_big_nohaplotig	exon	30413947	30414021	100	+	.	Parent=FBgn0035358.1.mrna1;Target=FBgn0035358.1 159 233 +
Chr2	stalkie_big_nohaplotig	exon	30414091	30414484	100	+	.	Parent=FBgn0035358.1.mrna1;Target=FBgn0035358.1 234 627 +
Chr2	stalkie_big_nohaplotig	CDS	30413659	30413816	.	+	0	Parent=FBgn0035358.1.mrna1;Target=FBgn0035358.1 1 158 +
Chr2	stalkie_big_nohaplotig	CDS	30413947	30414021	.	+	1	Parent=FBgn0035358.1.mrna1;Target=FBgn0035358.1 159 233 +
Chr2	stalkie_big_nohaplotig	CDS	30414091	30414484	.	+	1	Parent=FBgn0035358.1.mrna1;Target=FBgn0035358.1 234 627 +
Chr2	gffcl	locus	30415634	30416558	.	-	.	ID=RLOC_00015998;geneIDs=comp160692_c0_seq1.path2;transcripts=comp160692_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	30415634	30416558	.	-	.	ID=comp160692_c0_seq1.mrna2;geneID=comp160692_c0_seq1.path2;Name=comp160692_c0_seq1;Dir=indeterminatecoverage=96.6;identity=87.5;matches=844;mismatches=78;indels=43;unknowns=0;Target=comp160692_c0_seq1 976 15 .;CDS_Target=comp160692_c0_seq1 451 110 .;locus=RLOC_00015998
Chr2	stalkie_big_nohaplotig	exon	30415634	30416558	87	-	.	Parent=comp160692_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	30416120	30416460	.	-	0	Parent=comp160692_c0_seq1.mrna2
Chr2	gffcl	locus	30421221	30422800	.	+	.	ID=RLOC_00015999;geneIDs=FBgn0013772.1.path1;transcripts=FBgn0013772.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30421221	30422800	.	+	.	ID=FBgn0013772.1.mrna1;geneID=FBgn0013772.1.path1;Name=FBgn0013772.1;Dir=sensecoverage=99.3;identity=99.5;matches=1511;mismatches=8;indels=0;unknowns=0;locus=RLOC_00015999
Chr2	stalkie_big_nohaplotig	exon	30421221	30422317	99	+	.	Parent=FBgn0013772.1.mrna1;Target=FBgn0013772.1 12 1108 +
Chr2	stalkie_big_nohaplotig	exon	30422379	30422800	99	+	.	Parent=FBgn0013772.1.mrna1;Target=FBgn0013772.1 1109 1530 +
Chr2	stalkie_big_nohaplotig	CDS	30421222	30422317	.	+	0	Parent=FBgn0013772.1.mrna1;Target=FBgn0013772.1 13 1108 +
Chr2	stalkie_big_nohaplotig	CDS	30422379	30422800	.	+	2	Parent=FBgn0013772.1.mrna1;Target=FBgn0013772.1 1109 1530 +
Chr2	gffcl	locus	30423695	30424086	.	+	.	ID=RLOC_00016000;geneIDs=comp150057_c0_seq1.path1;transcripts=comp150057_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30423695	30424086	.	+	.	ID=comp150057_c0_seq1.mrna1;geneID=comp150057_c0_seq1.path1;Name=comp150057_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.2;matches=386;mismatches=6;indels=1;unknowns=0;Target=comp150057_c0_seq1 394 2 .;CDS_Target=comp150057_c0_seq1 59 3 .;locus=RLOC_00016000
Chr2	stalkie_big_nohaplotig	exon	30423695	30424086	98	+	.	Parent=comp150057_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	30423696	30423752	.	+	0	Parent=comp150057_c0_seq1.mrna1
Chr2	gffcl	locus	30428997	30628892	.	-	.	ID=RLOC_00016001;geneIDs=comp155850_c0_seq1.path1;transcripts=comp155850_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30428997	30628892	.	-	.	ID=comp155850_c0_seq1.mrna1;geneID=comp155850_c0_seq1.path1;Name=comp155850_c0_seq1;Dir=sensecoverage=99.9;identity=97.5;matches=1089;mismatches=11;indels=17;unknowns=0;locus=RLOC_00016001
Chr2	stalkie_big_nohaplotig	exon	30428997	30429238	98	-	.	Parent=comp155850_c0_seq1.mrna1;Target=comp155850_c0_seq1 877 1118 +
Chr2	stalkie_big_nohaplotig	exon	30429308	30429450	86	-	.	Parent=comp155850_c0_seq1.mrna1;Target=comp155850_c0_seq1 717 876 +
Chr2	stalkie_big_nohaplotig	exon	30627751	30628296	100	-	.	Parent=comp155850_c0_seq1.mrna1;Target=comp155850_c0_seq1 171 716 +
Chr2	stalkie_big_nohaplotig	exon	30628724	30628892	98	-	.	Parent=comp155850_c0_seq1.mrna1;Target=comp155850_c0_seq1 2 170 +
Chr2	stalkie_big_nohaplotig	CDS	30429447	30429450	.	-	1	Parent=comp155850_c0_seq1.mrna1;Target=comp155850_c0_seq1 717 720 +
Chr2	stalkie_big_nohaplotig	CDS	30627751	30628265	.	-	0	Parent=comp155850_c0_seq1.mrna1;Target=comp155850_c0_seq1 202 716 +
Chr2	gffcl	locus	30543440	30545806	.	-	.	ID=RLOC_00016002;geneIDs=comp120437_c0_seq1.path1;transcripts=comp120437_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30543440	30545806	.	-	.	ID=comp120437_c0_seq1.mrna1;geneID=comp120437_c0_seq1.path1;Name=comp120437_c0_seq1;Dir=sensecoverage=99.0;identity=99.6;matches=1035;mismatches=4;indels=0;unknowns=0;Target=comp120437_c0_seq1 268 942 +;locus=RLOC_00016002
Chr2	stalkie_big_nohaplotig	exon	30543440	30544236	100	-	.	Parent=comp120437_c0_seq1.mrna1;Target=comp120437_c0_seq1 251 1047 +
Chr2	stalkie_big_nohaplotig	exon	30544296	30544369	100	-	.	Parent=comp120437_c0_seq1.mrna1;Target=comp120437_c0_seq1 177 250 +
Chr2	stalkie_big_nohaplotig	exon	30545639	30545806	97	-	.	Parent=comp120437_c0_seq1.mrna1;Target=comp120437_c0_seq1 9 176 +
Chr2	stalkie_big_nohaplotig	CDS	30543545	30544219	.	-	0	Parent=comp120437_c0_seq1.mrna1
Chr2	gffcl	locus	30575937	30576556	.	-	.	ID=RLOC_00016003;geneIDs=comp308935_c0_seq1.path1;transcripts=comp308935_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30575937	30576556	.	-	.	ID=comp308935_c0_seq1.mrna1;geneID=comp308935_c0_seq1.path1;Name=comp308935_c0_seq1;Dir=indeterminatecoverage=98.1;identity=100.0;matches=620;mismatches=0;indels=0;unknowns=0;Target=comp308935_c0_seq1 624 5 .;CDS_Target=comp308935_c0_seq1 151 5 .;locus=RLOC_00016003
Chr2	stalkie_big_nohaplotig	exon	30575937	30576556	100	-	.	Parent=comp308935_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	30576410	30576556	.	-	0	Parent=comp308935_c0_seq1.mrna1
Chr2	gffcl	locus	30587642	30590798	.	+	.	ID=RLOC_00016004;geneIDs=comp152372_c0_seq1.path1;transcripts=comp152372_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30587642	30590798	.	+	.	ID=comp152372_c0_seq1.mrna1;geneID=comp152372_c0_seq1.path1;Name=comp152372_c0_seq1;Dir=sensecoverage=99.8;identity=98.4;matches=1215;mismatches=16;indels=4;unknowns=0;Target=comp152372_c0_seq1 474 1172 +;locus=RLOC_00016004
Chr2	stalkie_big_nohaplotig	exon	30587642	30588032	98	+	.	Parent=comp152372_c0_seq1.mrna1;Target=comp152372_c0_seq1 1 392 +
Chr2	stalkie_big_nohaplotig	exon	30589895	30589968	93	+	.	Parent=comp152372_c0_seq1.mrna1;Target=comp152372_c0_seq1 393 466 +
Chr2	stalkie_big_nohaplotig	exon	30590033	30590798	98	+	.	Parent=comp152372_c0_seq1.mrna1;Target=comp152372_c0_seq1 467 1235 +
Chr2	stalkie_big_nohaplotig	CDS	30590040	30590735	.	+	0	Parent=comp152372_c0_seq1.mrna1
Chr2	gffcl	locus	30602589	30604005	.	-	.	ID=RLOC_00016005;geneIDs=comp153453_c0_seq1.path2;transcripts=comp153453_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	30602589	30604005	.	-	.	ID=comp153453_c0_seq1.mrna2;geneID=comp153453_c0_seq1.path2;Name=comp153453_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1412;mismatches=4;indels=4;unknowns=0;Target=comp153453_c0_seq1 1419 1 .;CDS_Target=comp153453_c0_seq1 1269 1183 .;locus=RLOC_00016005
Chr2	stalkie_big_nohaplotig	exon	30602589	30604005	99	-	.	Parent=comp153453_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	30602739	30602824	.	-	0	Parent=comp153453_c0_seq1.mrna2
Chr2	gffcl	locus	30631564	30632638	.	-	.	ID=RLOC_00016006;geneIDs=ORF2154.path1;transcripts=ORF2154.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30631564	30632638	.	-	.	ID=ORF2154.mrna1;geneID=ORF2154.path1;Name=ORF2154;Dir=sensecoverage=100.0;identity=99.9;matches=905;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016006
Chr2	stalkie_big_nohaplotig	exon	30631564	30631852	99	-	.	Parent=ORF2154.mrna1;Target=ORF2154 618 906 +
Chr2	stalkie_big_nohaplotig	exon	30631954	30632524	100	-	.	Parent=ORF2154.mrna1;Target=ORF2154 47 617 +
Chr2	stalkie_big_nohaplotig	exon	30632593	30632638	100	-	.	Parent=ORF2154.mrna1;Target=ORF2154 1 46 +
Chr2	stalkie_big_nohaplotig	CDS	30631564	30631852	.	-	1	Parent=ORF2154.mrna1;Target=ORF2154 618 906 +
Chr2	stalkie_big_nohaplotig	CDS	30631954	30632524	.	-	2	Parent=ORF2154.mrna1;Target=ORF2154 47 617 +
Chr2	stalkie_big_nohaplotig	CDS	30632593	30632638	.	-	0	Parent=ORF2154.mrna1;Target=ORF2154 1 46 +
Chr2	gffcl	locus	30634433	30639715	.	+	.	ID=RLOC_00016007;geneIDs=comp153487_c0_seq1.path1;transcripts=comp153487_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30634433	30639715	.	+	.	ID=comp153487_c0_seq1.mrna1;geneID=comp153487_c0_seq1.path1;Name=comp153487_c0_seq1;Dir=sensecoverage=99.8;identity=98.6;matches=930;mismatches=9;indels=4;unknowns=0;locus=RLOC_00016007
Chr2	stalkie_big_nohaplotig	exon	30634433	30634593	97	+	.	Parent=comp153487_c0_seq1.mrna1;Target=comp153487_c0_seq1 1 161 +
Chr2	stalkie_big_nohaplotig	exon	30634697	30634847	100	+	.	Parent=comp153487_c0_seq1.mrna1;Target=comp153487_c0_seq1 162 312 +
Chr2	stalkie_big_nohaplotig	exon	30634903	30635012	100	+	.	Parent=comp153487_c0_seq1.mrna1;Target=comp153487_c0_seq1 313 422 +
Chr2	stalkie_big_nohaplotig	exon	30639199	30639715	98	+	.	Parent=comp153487_c0_seq1.mrna1;Target=comp153487_c0_seq1 423 943 +
Chr2	stalkie_big_nohaplotig	CDS	30634478	30634593	.	+	0	Parent=comp153487_c0_seq1.mrna1;Target=comp153487_c0_seq1 46 161 +
Chr2	stalkie_big_nohaplotig	CDS	30634697	30634835	.	+	1	Parent=comp153487_c0_seq1.mrna1;Target=comp153487_c0_seq1 162 300 +
Chr2	gffcl	locus	30663583	30664321	.	-	.	ID=RLOC_00016008;geneIDs=comp136035_c0_seq1.path1;transcripts=comp136035_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30663583	30664321	.	-	.	ID=comp136035_c0_seq1.mrna1;geneID=comp136035_c0_seq1.path1;Name=comp136035_c0_seq1;Dir=indeterminatecoverage=98.4;identity=100.0;matches=739;mismatches=0;indels=0;unknowns=0;Target=comp136035_c0_seq1 739 1 .;CDS_Target=comp136035_c0_seq1 460 164 .;locus=RLOC_00016008
Chr2	stalkie_big_nohaplotig	exon	30663583	30664321	100	-	.	Parent=comp136035_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	30663862	30664158	.	-	0	Parent=comp136035_c0_seq1.mrna1
Chr2	gffcl	locus	30667694	30669976	.	-	.	ID=RLOC_00016009;geneIDs=FBgn0034661.1.path1;transcripts=FBgn0034661.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30667694	30669976	.	-	.	ID=FBgn0034661.1.mrna1;geneID=FBgn0034661.1.path1;Name=FBgn0034661.1;Dir=sensecoverage=100.0;identity=98.6;matches=1227;mismatches=15;indels=3;unknowns=0;locus=RLOC_00016009
Chr2	stalkie_big_nohaplotig	exon	30667694	30668017	100	-	.	Parent=FBgn0034661.1.mrna1;Target=FBgn0034661.1 919 1242 +
Chr2	stalkie_big_nohaplotig	exon	30669056	30669976	98	-	.	Parent=FBgn0034661.1.mrna1;Target=FBgn0034661.1 1 918 +
Chr2	stalkie_big_nohaplotig	CDS	30667694	30668017	.	-	0	Parent=FBgn0034661.1.mrna1;Target=FBgn0034661.1 919 1242 +
Chr2	stalkie_big_nohaplotig	CDS	30669056	30669976	.	-	0	Parent=FBgn0034661.1.mrna1;Target=FBgn0034661.1 1 918 +
Chr2	gffcl	locus	30690074	30693031	.	-	.	ID=RLOC_00016010;geneIDs=FBgn0034660.1.path1;transcripts=FBgn0034660.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30690074	30693031	.	-	.	ID=FBgn0034660.1.mrna1;geneID=FBgn0034660.1.path1;Name=FBgn0034660.1;Dir=sensecoverage=100.0;identity=99.8;matches=1515;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016010
Chr2	stalkie_big_nohaplotig	exon	30690074	30690288	100	-	.	Parent=FBgn0034660.1.mrna1;Target=FBgn0034660.1 1304 1518 +
Chr2	stalkie_big_nohaplotig	exon	30690349	30690506	100	-	.	Parent=FBgn0034660.1.mrna1;Target=FBgn0034660.1 1146 1303 +
Chr2	stalkie_big_nohaplotig	exon	30690569	30691499	99	-	.	Parent=FBgn0034660.1.mrna1;Target=FBgn0034660.1 215 1145 +
Chr2	stalkie_big_nohaplotig	exon	30692818	30693031	100	-	.	Parent=FBgn0034660.1.mrna1;Target=FBgn0034660.1 1 214 +
Chr2	stalkie_big_nohaplotig	CDS	30690074	30690288	.	-	2	Parent=FBgn0034660.1.mrna1;Target=FBgn0034660.1 1304 1518 +
Chr2	stalkie_big_nohaplotig	CDS	30690349	30690506	.	-	1	Parent=FBgn0034660.1.mrna1;Target=FBgn0034660.1 1146 1303 +
Chr2	stalkie_big_nohaplotig	CDS	30690569	30691499	.	-	2	Parent=FBgn0034660.1.mrna1;Target=FBgn0034660.1 215 1145 +
Chr2	stalkie_big_nohaplotig	CDS	30692818	30693031	.	-	0	Parent=FBgn0034660.1.mrna1;Target=FBgn0034660.1 1 214 +
Chr2	gffcl	locus	30755275	30755984	.	-	.	ID=RLOC_00016012;geneIDs=comp128357_c0_seq1.path1;transcripts=comp128357_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30755275	30755984	.	-	.	ID=comp128357_c0_seq1.mrna1;geneID=comp128357_c0_seq1.path1;Name=comp128357_c0_seq1;Dir=indeterminatecoverage=99.3;identity=95.2;matches=676;mismatches=14;indels=20;unknowns=0;Target=comp128357_c0_seq1 690 1 .;CDS_Target=comp128357_c0_seq1 556 2 .;locus=RLOC_00016012
Chr2	stalkie_big_nohaplotig	exon	30755275	30755984	95	-	.	Parent=comp128357_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	30755429	30755983	.	-	0	Parent=comp128357_c0_seq1.mrna1
Chr2	gffcl	locus	30756812	30757313	.	+	.	ID=RLOC_00016013;geneIDs=comp153031_c0_seq1.path1;transcripts=comp153031_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30756812	30757313	.	+	.	ID=comp153031_c0_seq1.mrna1;geneID=comp153031_c0_seq1.path1;Name=comp153031_c0_seq1;Dir=indeterminatecoverage=98.9;identity=95.4;matches=353;mismatches=17;indels=0;unknowns=0;locus=RLOC_00016013
Chr2	stalkie_big_nohaplotig	exon	30756812	30756978	91	+	.	Parent=comp153031_c0_seq1.mrna1;Target=comp153031_c0_seq1 171 5 .
Chr2	stalkie_big_nohaplotig	exon	30757111	30757313	98	+	.	Parent=comp153031_c0_seq1.mrna1;Target=comp153031_c0_seq1 374 172 .
Chr2	stalkie_big_nohaplotig	CDS	30756813	30756978	.	+	0	Parent=comp153031_c0_seq1.mrna1;Target=comp153031_c0_seq1 171 6 .
Chr2	stalkie_big_nohaplotig	CDS	30757111	30757313	.	+	2	Parent=comp153031_c0_seq1.mrna1;Target=comp153031_c0_seq1 374 172 .
Chr2	gffcl	locus	30757353	30757746	.	+	.	ID=RLOC_00016014;geneIDs=comp60326_c0_seq1.path1;transcripts=comp60326_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30757353	30757746	.	+	.	ID=comp60326_c0_seq1.mrna1;geneID=comp60326_c0_seq1.path1;Name=comp60326_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=394;mismatches=0;indels=0;unknowns=0;Target=comp60326_c0_seq1 394 1 .;CDS_Target=comp60326_c0_seq1 237 1 .;locus=RLOC_00016014
Chr2	stalkie_big_nohaplotig	exon	30757353	30757746	100	+	.	Parent=comp60326_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	30757353	30757589	.	+	0	Parent=comp60326_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30781910	32609701	.	-	.	ID=comp155287_c0_seq1.mrna1;geneID=comp155287_c0_seq1.path1;Name=comp155287_c0_seq1;Dir=sensecoverage=99.9;identity=97.3;matches=917;mismatches=23;indels=2;unknowns=0;locus=RLOC_00016015
Chr2	stalkie_big_nohaplotig	exon	30781910	30781930	95	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 1119 1139 +
Chr2	stalkie_big_nohaplotig	exon	30790790	30790798	100	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 1095 1103 +
Chr2	stalkie_big_nohaplotig	exon	30791220	30791227	100	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 1087 1094 +
Chr2	stalkie_big_nohaplotig	exon	30808379	30808391	100	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 1045 1057 +
Chr2	stalkie_big_nohaplotig	exon	30808766	30808776	100	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 1000 1010 +
Chr2	stalkie_big_nohaplotig	exon	30812282	30812296	58	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 862 878 +
Chr2	stalkie_big_nohaplotig	exon	30820672	30820683	100	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 848 859 +
Chr2	stalkie_big_nohaplotig	exon	30834882	30834888	100	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 841 847 +
Chr2	stalkie_big_nohaplotig	exon	30837438	30837460	86	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 818 840 +
Chr2	stalkie_big_nohaplotig	exon	30837535	30837540	100	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 812 817 +
Chr2	stalkie_big_nohaplotig	exon	30841552	30841559	87	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 804 811 +
Chr2	stalkie_big_nohaplotig	exon	30843314	30843321	100	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 796 803 +
Chr2	stalkie_big_nohaplotig	exon	30846307	30846316	100	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 786 795 +
Chr2	stalkie_big_nohaplotig	exon	30846933	30846935	100	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 783 785 +
Chr2	stalkie_big_nohaplotig	exon	30848090	30848097	100	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 775 782 +
Chr2	stalkie_big_nohaplotig	exon	30848495	30848501	100	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 768 774 +
Chr2	stalkie_big_nohaplotig	exon	32607793	32607979	100	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 581 767 +
Chr2	stalkie_big_nohaplotig	exon	32608044	32608073	100	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 551 580 +
Chr2	stalkie_big_nohaplotig	exon	32608214	32608261	100	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 503 550 +
Chr2	stalkie_big_nohaplotig	exon	32608320	32608349	93	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 473 502 +
Chr2	stalkie_big_nohaplotig	exon	32608437	32608484	97	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 425 472 +
Chr2	stalkie_big_nohaplotig	exon	32608543	32608572	96	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 395 424 +
Chr2	stalkie_big_nohaplotig	exon	32608654	32608701	85	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 347 394 +
Chr2	stalkie_big_nohaplotig	exon	32608761	32608790	100	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 317 346 +
Chr2	stalkie_big_nohaplotig	exon	32608873	32608920	100	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 269 316 +
Chr2	stalkie_big_nohaplotig	exon	32608979	32609008	100	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 239 268 +
Chr2	stalkie_big_nohaplotig	exon	32609096	32609143	97	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 191 238 +
Chr2	stalkie_big_nohaplotig	exon	32609512	32609701	99	-	.	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 1 190 +
Chr2	stalkie_big_nohaplotig	CDS	32607914	32607979	.	-	0	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 581 646 +
Chr2	stalkie_big_nohaplotig	CDS	32608044	32608073	.	-	0	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 551 580 +
Chr2	stalkie_big_nohaplotig	CDS	32608214	32608261	.	-	0	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 503 550 +
Chr2	stalkie_big_nohaplotig	CDS	32608320	32608349	.	-	0	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 473 502 +
Chr2	stalkie_big_nohaplotig	CDS	32608437	32608484	.	-	0	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 425 472 +
Chr2	stalkie_big_nohaplotig	CDS	32608543	32608572	.	-	0	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 395 424 +
Chr2	stalkie_big_nohaplotig	CDS	32608654	32608701	.	-	0	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 347 394 +
Chr2	stalkie_big_nohaplotig	CDS	32608761	32608790	.	-	0	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 317 346 +
Chr2	stalkie_big_nohaplotig	CDS	32608873	32608920	.	-	0	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 269 316 +
Chr2	stalkie_big_nohaplotig	CDS	32608979	32609008	.	-	0	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 239 268 +
Chr2	stalkie_big_nohaplotig	CDS	32609096	32609143	.	-	0	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 191 238 +
Chr2	stalkie_big_nohaplotig	CDS	32609512	32609607	.	-	0	Parent=comp155287_c0_seq1.mrna1;Target=comp155287_c0_seq1 95 190 +
Chr2	gffcl	locus	30787317	30788605	.	-	.	ID=RLOC_00016016;geneIDs=comp156070_c0_seq1.path1;transcripts=comp156070_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30787317	30788605	.	-	.	ID=comp156070_c0_seq1.mrna1;geneID=comp156070_c0_seq1.path1;Name=comp156070_c0_seq1;Dir=sensecoverage=99.0;identity=99.6;matches=1106;mismatches=3;indels=1;unknowns=0;Target=comp156070_c0_seq1 472 1002 +;locus=RLOC_00016016
Chr2	stalkie_big_nohaplotig	exon	30787317	30788089	99	-	.	Parent=comp156070_c0_seq1.mrna1;Target=comp156070_c0_seq1 340 1113 +
Chr2	stalkie_big_nohaplotig	exon	30788198	30788369	100	-	.	Parent=comp156070_c0_seq1.mrna1;Target=comp156070_c0_seq1 168 339 +
Chr2	stalkie_big_nohaplotig	exon	30788442	30788605	98	-	.	Parent=comp156070_c0_seq1.mrna1;Target=comp156070_c0_seq1 4 167 +
Chr2	stalkie_big_nohaplotig	CDS	30787428	30787958	.	-	0	Parent=comp156070_c0_seq1.mrna1
Chr2	gffcl	locus	30820953	30821853	.	-	.	ID=RLOC_00016017;geneIDs=comp146282_c1_seq1.path1;transcripts=comp146282_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30820953	30821853	.	-	.	ID=comp146282_c1_seq1.mrna1;geneID=comp146282_c1_seq1.path1;Name=comp146282_c1_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=901;mismatches=0;indels=0;unknowns=0;Target=comp146282_c1_seq1 901 1 .;CDS_Target=comp146282_c1_seq1 558 373 .;locus=RLOC_00016017
Chr2	stalkie_big_nohaplotig	exon	30820953	30821853	100	-	.	Parent=comp146282_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	30821296	30821481	.	-	0	Parent=comp146282_c1_seq1.mrna1
Chr2	gffcl	locus	30838022	30838757	.	+	.	ID=RLOC_00016018;geneIDs=FBgn0028737.1.path1;transcripts=FBgn0028737.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30838022	30838757	.	+	.	ID=FBgn0028737.1.mrna1;geneID=FBgn0028737.1.path1;Name=FBgn0028737.1;Dir=sensecoverage=100.0;identity=100.0;matches=663;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016018
Chr2	stalkie_big_nohaplotig	exon	30838022	30838107	100	+	.	Parent=FBgn0028737.1.mrna1;Target=FBgn0028737.1 1 86 +
Chr2	stalkie_big_nohaplotig	exon	30838181	30838757	100	+	.	Parent=FBgn0028737.1.mrna1;Target=FBgn0028737.1 87 663 +
Chr2	stalkie_big_nohaplotig	CDS	30838022	30838107	.	+	0	Parent=FBgn0028737.1.mrna1;Target=FBgn0028737.1 1 86 +
Chr2	stalkie_big_nohaplotig	CDS	30838181	30838757	.	+	1	Parent=FBgn0028737.1.mrna1;Target=FBgn0028737.1 87 663 +
Chr2	gffcl	locus	30861523	30874592	.	+	.	ID=RLOC_00016019;geneIDs=FBgn0034162.1.path1;transcripts=FBgn0034162.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30861523	30874592	.	+	.	ID=FBgn0034162.1.mrna1;geneID=FBgn0034162.1.path1;Name=FBgn0034162.1;Dir=sensecoverage=100.0;identity=97.9;matches=476;mismatches=10;indels=0;unknowns=0;locus=RLOC_00016019
Chr2	stalkie_big_nohaplotig	exon	30861523	30861607	100	+	.	Parent=FBgn0034162.1.mrna1;Target=FBgn0034162.1 1 85 +
Chr2	stalkie_big_nohaplotig	exon	30874123	30874293	98	+	.	Parent=FBgn0034162.1.mrna1;Target=FBgn0034162.1 86 256 +
Chr2	stalkie_big_nohaplotig	exon	30874363	30874592	96	+	.	Parent=FBgn0034162.1.mrna1;Target=FBgn0034162.1 257 486 +
Chr2	stalkie_big_nohaplotig	CDS	30861523	30861607	.	+	0	Parent=FBgn0034162.1.mrna1;Target=FBgn0034162.1 1 85 +
Chr2	stalkie_big_nohaplotig	CDS	30874123	30874293	.	+	2	Parent=FBgn0034162.1.mrna1;Target=FBgn0034162.1 86 256 +
Chr2	stalkie_big_nohaplotig	CDS	30874363	30874592	.	+	2	Parent=FBgn0034162.1.mrna1;Target=FBgn0034162.1 257 486 +
Chr2	gffcl	locus	30876457	30878228	.	-	.	ID=RLOC_00016020;geneIDs=ORF510.path1;transcripts=ORF510.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30876457	30878228	.	-	.	ID=ORF510.mrna1;geneID=ORF510.path1;Name=ORF510;Dir=sensecoverage=100.0;identity=97.7;matches=1667;mismatches=39;indels=1;unknowns=0;Target=ORF510 3 65 +;locus=RLOC_00016020
Chr2	stalkie_big_nohaplotig	exon	30876457	30877540	97	-	.	Parent=ORF510.mrna1;Target=ORF510 624 1707 +
Chr2	stalkie_big_nohaplotig	exon	30877607	30878228	98	-	.	Parent=ORF510.mrna1;Target=ORF510 1 623 +
Chr2	stalkie_big_nohaplotig	CDS	30878165	30878226	.	-	0	Parent=ORF510.mrna1
Chr2	gffcl	locus	30880400	30880630	.	+	.	ID=RLOC_00016021;geneIDs=comp100195_c0_seq1.path1;transcripts=comp100195_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30880400	30880630	.	+	.	ID=comp100195_c0_seq1.mrna1;geneID=comp100195_c0_seq1.path1;Name=comp100195_c0_seq1;Dir=indeterminatecoverage=94.0;identity=97.0;matches=227;mismatches=4;indels=3;unknowns=0;Target=comp100195_c0_seq1 234 1 .;CDS_Target=comp100195_c0_seq1 43 2 .;locus=RLOC_00016021
Chr2	stalkie_big_nohaplotig	exon	30880400	30880630	97	+	.	Parent=comp100195_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	30880401	30880440	.	+	0	Parent=comp100195_c0_seq1.mrna1
Chr2	gffcl	locus	30881767	30882978	.	-	.	ID=RLOC_00016022;geneIDs=comp153208_c0_seq1.path1;transcripts=comp153208_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30881767	30882978	.	-	.	ID=comp153208_c0_seq1.mrna1;geneID=comp153208_c0_seq1.path1;Name=comp153208_c0_seq1;Dir=indeterminatecoverage=100.0;identity=81.2;matches=1018;mismatches=82;indels=154;unknowns=0;Target=comp153208_c0_seq1 256 128 .;locus=RLOC_00016022
Chr2	stalkie_big_nohaplotig	exon	30881767	30882066	75	-	.	Parent=comp153208_c0_seq1.mrna1;Target=comp153208_c0_seq1 1197 845 .
Chr2	stalkie_big_nohaplotig	exon	30882107	30882978	83	-	.	Parent=comp153208_c0_seq1.mrna1;Target=comp153208_c0_seq1 829 1 .
Chr2	stalkie_big_nohaplotig	CDS	30882695	30882851	.	-	0	Parent=comp153208_c0_seq1.mrna1
Chr2	gffcl	locus	30884151	30888872	.	-	.	ID=RLOC_00016023;geneIDs=FBgn0025833.1.path2;transcripts=FBgn0025833.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	30884151	30888872	.	-	.	ID=FBgn0025833.1.mrna2;geneID=FBgn0025833.1.path2;Name=FBgn0025833.1;Dir=sensecoverage=90.2;identity=99.6;matches=1626;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016023
Chr2	stalkie_big_nohaplotig	exon	30884151	30884273	100	-	.	Parent=FBgn0025833.1.mrna2;Target=FBgn0025833.1 1687 1809 +
Chr2	stalkie_big_nohaplotig	exon	30884863	30884954	100	-	.	Parent=FBgn0025833.1.mrna2;Target=FBgn0025833.1 1595 1686 +
Chr2	stalkie_big_nohaplotig	exon	30887306	30887751	99	-	.	Parent=FBgn0025833.1.mrna2;Target=FBgn0025833.1 1149 1594 +
Chr2	stalkie_big_nohaplotig	exon	30887846	30888080	100	-	.	Parent=FBgn0025833.1.mrna2;Target=FBgn0025833.1 914 1148 +
Chr2	stalkie_big_nohaplotig	exon	30888137	30888872	99	-	.	Parent=FBgn0025833.1.mrna2;Target=FBgn0025833.1 178 913 +
Chr2	stalkie_big_nohaplotig	CDS	30884151	30884273	.	-	0	Parent=FBgn0025833.1.mrna2;Target=FBgn0025833.1 1687 1809 +
Chr2	stalkie_big_nohaplotig	CDS	30884863	30884954	.	-	2	Parent=FBgn0025833.1.mrna2;Target=FBgn0025833.1 1595 1686 +
Chr2	stalkie_big_nohaplotig	CDS	30887306	30887751	.	-	1	Parent=FBgn0025833.1.mrna2;Target=FBgn0025833.1 1149 1594 +
Chr2	stalkie_big_nohaplotig	CDS	30887846	30888080	.	-	2	Parent=FBgn0025833.1.mrna2;Target=FBgn0025833.1 914 1148 +
Chr2	stalkie_big_nohaplotig	CDS	30888137	30888872	.	-	0	Parent=FBgn0025833.1.mrna2;Target=FBgn0025833.1 178 913 +
Chr2	gffcl	locus	30906053	30925238	.	+	.	ID=RLOC_00016024;geneIDs=FBgn0034166.1.path1;transcripts=FBgn0034166.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30906053	30925238	.	+	.	ID=FBgn0034166.1.mrna1;geneID=FBgn0034166.1.path1;Name=FBgn0034166.1;Dir=sensecoverage=100.0;identity=99.6;matches=1186;mismatches=3;indels=2;unknowns=0;locus=RLOC_00016024
Chr2	stalkie_big_nohaplotig	exon	30906053	30906113	100	+	.	Parent=FBgn0034166.1.mrna1;Target=FBgn0034166.1 1 61 +
Chr2	stalkie_big_nohaplotig	exon	30919847	30919946	100	+	.	Parent=FBgn0034166.1.mrna1;Target=FBgn0034166.1 62 161 +
Chr2	stalkie_big_nohaplotig	exon	30920040	30920194	99	+	.	Parent=FBgn0034166.1.mrna1;Target=FBgn0034166.1 162 316 +
Chr2	stalkie_big_nohaplotig	exon	30920318	30920572	100	+	.	Parent=FBgn0034166.1.mrna1;Target=FBgn0034166.1 317 571 +
Chr2	stalkie_big_nohaplotig	exon	30923180	30923398	100	+	.	Parent=FBgn0034166.1.mrna1;Target=FBgn0034166.1 572 790 +
Chr2	stalkie_big_nohaplotig	exon	30923663	30923816	99	+	.	Parent=FBgn0034166.1.mrna1;Target=FBgn0034166.1 791 944 +
Chr2	stalkie_big_nohaplotig	exon	30924994	30925238	98	+	.	Parent=FBgn0034166.1.mrna1;Target=FBgn0034166.1 945 1191 +
Chr2	stalkie_big_nohaplotig	CDS	30906053	30906113	.	+	0	Parent=FBgn0034166.1.mrna1;Target=FBgn0034166.1 1 61 +
Chr2	stalkie_big_nohaplotig	CDS	30919847	30919946	.	+	2	Parent=FBgn0034166.1.mrna1;Target=FBgn0034166.1 62 161 +
Chr2	stalkie_big_nohaplotig	CDS	30920040	30920194	.	+	1	Parent=FBgn0034166.1.mrna1;Target=FBgn0034166.1 162 316 +
Chr2	stalkie_big_nohaplotig	CDS	30920318	30920572	.	+	2	Parent=FBgn0034166.1.mrna1;Target=FBgn0034166.1 317 571 +
Chr2	stalkie_big_nohaplotig	CDS	30923180	30923398	.	+	2	Parent=FBgn0034166.1.mrna1;Target=FBgn0034166.1 572 790 +
Chr2	stalkie_big_nohaplotig	CDS	30923663	30923816	.	+	2	Parent=FBgn0034166.1.mrna1;Target=FBgn0034166.1 791 944 +
Chr2	stalkie_big_nohaplotig	CDS	30924994	30925238	.	+	1	Parent=FBgn0034166.1.mrna1;Target=FBgn0034166.1 945 1191 +
Chr2	gffcl	locus	30930832	30931994	.	+	.	ID=RLOC_00016025;geneIDs=FBgn0262534.2.path4;transcripts=FBgn0262534.2.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	30930832	30931994	.	+	.	ID=FBgn0262534.2.mrna4;geneID=FBgn0262534.2.path4;Name=FBgn0262534.2;Dir=sensecoverage=100.0;identity=99.2;matches=1053;mismatches=9;indels=0;unknowns=0;locus=RLOC_00016025
Chr2	stalkie_big_nohaplotig	exon	30930832	30930965	99	+	.	Parent=FBgn0262534.2.mrna4;Target=FBgn0262534.2 1 134 +
Chr2	stalkie_big_nohaplotig	exon	30931020	30931446	99	+	.	Parent=FBgn0262534.2.mrna4;Target=FBgn0262534.2 135 561 +
Chr2	stalkie_big_nohaplotig	exon	30931494	30931994	99	+	.	Parent=FBgn0262534.2.mrna4;Target=FBgn0262534.2 562 1062 +
Chr2	stalkie_big_nohaplotig	CDS	30930832	30930965	.	+	0	Parent=FBgn0262534.2.mrna4;Target=FBgn0262534.2 1 134 +
Chr2	stalkie_big_nohaplotig	CDS	30931020	30931446	.	+	1	Parent=FBgn0262534.2.mrna4;Target=FBgn0262534.2 135 561 +
Chr2	stalkie_big_nohaplotig	CDS	30931494	30931994	.	+	0	Parent=FBgn0262534.2.mrna4;Target=FBgn0262534.2 562 1062 +
Chr2	gffcl	locus	30935766	30936516	.	-	.	ID=RLOC_00016026;geneIDs=comp149313_c0_seq1.path1;transcripts=comp149313_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30935766	30936516	.	-	.	ID=comp149313_c0_seq1.mrna1;geneID=comp149313_c0_seq1.path1;Name=comp149313_c0_seq1;Dir=sensecoverage=99.3;identity=98.5;matches=669;mismatches=10;indels=0;unknowns=0;locus=RLOC_00016026
Chr2	stalkie_big_nohaplotig	exon	30935766	30936221	98	-	.	Parent=comp149313_c0_seq1.mrna1;Target=comp149313_c0_seq1 224 679 +
Chr2	stalkie_big_nohaplotig	exon	30936294	30936516	99	-	.	Parent=comp149313_c0_seq1.mrna1;Target=comp149313_c0_seq1 1 223 +
Chr2	stalkie_big_nohaplotig	CDS	30935813	30936221	.	-	1	Parent=comp149313_c0_seq1.mrna1;Target=comp149313_c0_seq1 224 632 +
Chr2	stalkie_big_nohaplotig	CDS	30936294	30936364	.	-	0	Parent=comp149313_c0_seq1.mrna1;Target=comp149313_c0_seq1 153 223 +
Chr2	gffcl	locus	30945887	30947491	.	+	.	ID=RLOC_00016027;geneIDs=comp119074_c0_seq1.path1;transcripts=comp119074_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30945887	30947491	.	+	.	ID=comp119074_c0_seq1.mrna1;geneID=comp119074_c0_seq1.path1;Name=comp119074_c0_seq1;Dir=sensecoverage=99.9;identity=100.0;matches=1014;mismatches=0;indels=0;unknowns=0;Target=comp119074_c0_seq1 551 736 +;locus=RLOC_00016027
Chr2	stalkie_big_nohaplotig	exon	30945887	30946199	100	+	.	Parent=comp119074_c0_seq1.mrna1;Target=comp119074_c0_seq1 1 313 +
Chr2	stalkie_big_nohaplotig	exon	30946791	30947491	100	+	.	Parent=comp119074_c0_seq1.mrna1;Target=comp119074_c0_seq1 314 1014 +
Chr2	stalkie_big_nohaplotig	CDS	30947028	30947213	.	+	0	Parent=comp119074_c0_seq1.mrna1
Chr2	gffcl	locus	30950617	30955361	.	.	.	ID=RLOC_00016028;geneIDs=FBgn0004784.1.path1,comp87420_c0_seq1.path1,comp144641_c0_seq1.path1,comp151459_c0_seq1.path1;transcripts=FBgn0004784.1.mrna1,comp87420_c0_seq1.mrna1,comp144641_c0_seq1.mrna1,comp151459_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30950617	30955361	.	-	.	ID=FBgn0004784.1.mrna1;geneID=FBgn0004784.1.path1;Name=FBgn0004784.1;Dir=sensecoverage=100.0;identity=100.0;matches=2055;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016028
Chr2	stalkie_big_nohaplotig	exon	30950617	30950766	100	-	.	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 1906 2055 +
Chr2	stalkie_big_nohaplotig	exon	30951043	30951183	100	-	.	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 1765 1905 +
Chr2	stalkie_big_nohaplotig	exon	30951312	30951500	100	-	.	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 1576 1764 +
Chr2	stalkie_big_nohaplotig	exon	30951558	30951759	100	-	.	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 1374 1575 +
Chr2	stalkie_big_nohaplotig	exon	30951829	30951920	100	-	.	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 1282 1373 +
Chr2	stalkie_big_nohaplotig	exon	30952133	30952441	100	-	.	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 973 1281 +
Chr2	stalkie_big_nohaplotig	exon	30952922	30953032	100	-	.	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 862 972 +
Chr2	stalkie_big_nohaplotig	exon	30953090	30953207	100	-	.	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 744 861 +
Chr2	stalkie_big_nohaplotig	exon	30954147	30954303	100	-	.	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 587 743 +
Chr2	stalkie_big_nohaplotig	exon	30954378	30954506	100	-	.	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 458 586 +
Chr2	stalkie_big_nohaplotig	exon	30954576	30954770	100	-	.	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 263 457 +
Chr2	stalkie_big_nohaplotig	exon	30954911	30954942	100	-	.	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 231 262 +
Chr2	stalkie_big_nohaplotig	exon	30955132	30955361	100	-	.	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 1 230 +
Chr2	stalkie_big_nohaplotig	CDS	30950617	30950766	.	-	0	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 1906 2055 +
Chr2	stalkie_big_nohaplotig	CDS	30951043	30951183	.	-	0	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 1765 1905 +
Chr2	stalkie_big_nohaplotig	CDS	30951312	30951500	.	-	0	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 1576 1764 +
Chr2	stalkie_big_nohaplotig	CDS	30951558	30951759	.	-	1	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 1374 1575 +
Chr2	stalkie_big_nohaplotig	CDS	30951829	30951920	.	-	0	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 1282 1373 +
Chr2	stalkie_big_nohaplotig	CDS	30952133	30952441	.	-	0	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 973 1281 +
Chr2	stalkie_big_nohaplotig	CDS	30952922	30953032	.	-	0	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 862 972 +
Chr2	stalkie_big_nohaplotig	CDS	30953090	30953207	.	-	1	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 744 861 +
Chr2	stalkie_big_nohaplotig	CDS	30954147	30954303	.	-	2	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 587 743 +
Chr2	stalkie_big_nohaplotig	CDS	30954378	30954506	.	-	2	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 458 586 +
Chr2	stalkie_big_nohaplotig	CDS	30954576	30954770	.	-	2	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 263 457 +
Chr2	stalkie_big_nohaplotig	CDS	30954911	30954942	.	-	1	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 231 262 +
Chr2	stalkie_big_nohaplotig	CDS	30955132	30955361	.	-	0	Parent=FBgn0004784.1.mrna1;Target=FBgn0004784.1 1 230 +
Chr2	stalkie_big_nohaplotig	mRNA	30950823	30951065	.	+	.	ID=comp87420_c0_seq1.mrna1;geneID=comp87420_c0_seq1.path1;Name=comp87420_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=243;mismatches=0;indels=0;unknowns=0;Target=comp87420_c0_seq1 243 1 .;CDS_Target=comp87420_c0_seq1 66 25 .;locus=RLOC_00016028
Chr2	stalkie_big_nohaplotig	exon	30950823	30951065	100	+	.	Parent=comp87420_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	30950847	30950888	.	+	0	Parent=comp87420_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30951899	30952155	.	+	.	ID=comp144641_c0_seq1.mrna1;geneID=comp144641_c0_seq1.path1;Name=comp144641_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=257;mismatches=0;indels=0;unknowns=0;Target=comp144641_c0_seq1 257 1 .;CDS_Target=comp144641_c0_seq1 199 104 .;locus=RLOC_00016028
Chr2	stalkie_big_nohaplotig	exon	30951899	30952155	100	+	.	Parent=comp144641_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	30952002	30952097	.	+	0	Parent=comp144641_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30953178	30953572	.	+	.	ID=comp151459_c0_seq1.mrna1;geneID=comp151459_c0_seq1.path1;Name=comp151459_c0_seq1;Dir=indeterminatecoverage=76.3;identity=91.2;matches=373;mismatches=22;indels=14;unknowns=0;Target=comp151459_c0_seq1 411 3 .;CDS_Target=comp151459_c0_seq1 105 4 .;locus=RLOC_00016028
Chr2	stalkie_big_nohaplotig	exon	30953178	30953572	91	+	.	Parent=comp151459_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	30953179	30953280	.	+	0	Parent=comp151459_c0_seq1.mrna1
Chr2	gffcl	locus	30975840	30976016	.	+	.	ID=RLOC_00016029;geneIDs=FBgn0025833.1.path1;transcripts=FBgn0025833.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30975840	30976016	.	+	.	ID=FBgn0025833.1.mrna1;geneID=FBgn0025833.1.path1;Name=FBgn0025833.1;Dir=indeterminatecoverage=9.8;identity=100.0;matches=177;mismatches=0;indels=0;unknowns=0;Target=FBgn0025833.1 177 1 .;locus=RLOC_00016029
Chr2	stalkie_big_nohaplotig	exon	30975840	30976016	100	+	.	Parent=FBgn0025833.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	30975840	30976016	.	+	0	Parent=FBgn0025833.1.mrna1
Chr2	gffcl	locus	30980046	30980094	.	+	.	ID=RLOC_00016030;geneIDs=comp147212_c0_seq1.path1;transcripts=comp147212_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30980046	30980094	.	+	.	ID=comp147212_c0_seq1.mrna1;geneID=comp147212_c0_seq1.path1;Name=comp147212_c0_seq1;Dir=indeterminatecoverage=8.8;identity=95.9;matches=47;mismatches=2;indels=0;unknowns=0;Target=comp147212_c0_seq1 49 1 .;locus=RLOC_00016030
Chr2	stalkie_big_nohaplotig	exon	30980046	30980094	95	+	.	Parent=comp147212_c0_seq1.mrna1
Chr2	gffcl	locus	30998194	30998930	.	-	.	ID=RLOC_00016031;geneIDs=comp148827_c0_seq1.path1;transcripts=comp148827_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	30998194	30998930	.	-	.	ID=comp148827_c0_seq1.mrna1;geneID=comp148827_c0_seq1.path1;Name=comp148827_c0_seq1;Dir=sensecoverage=99.5;identity=97.9;matches=646;mismatches=14;indels=0;unknowns=0;Target=comp148827_c0_seq1 246 590 +;locus=RLOC_00016031
Chr2	stalkie_big_nohaplotig	exon	30998194	30998641	98	-	.	Parent=comp148827_c0_seq1.mrna1;Target=comp148827_c0_seq1 213 660 +
Chr2	stalkie_big_nohaplotig	exon	30998719	30998930	96	-	.	Parent=comp148827_c0_seq1.mrna1;Target=comp148827_c0_seq1 1 212 +
Chr2	stalkie_big_nohaplotig	CDS	30998264	30998608	.	-	0	Parent=comp148827_c0_seq1.mrna1
Chr2	gffcl	locus	31040649	31040833	.	-	.	ID=RLOC_00016032;geneIDs=FBgn0003091.1.path1;transcripts=FBgn0003091.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31040649	31040833	.	-	.	ID=FBgn0003091.1.mrna1;geneID=FBgn0003091.1.path1;Name=FBgn0003091.1;Dir=indeterminatecoverage=9.0;identity=100.0;matches=185;mismatches=0;indels=0;unknowns=0;Target=FBgn0003091.1 185 1 .;locus=RLOC_00016032
Chr2	stalkie_big_nohaplotig	exon	31040649	31040833	100	-	.	Parent=FBgn0003091.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31040649	31040833	.	-	0	Parent=FBgn0003091.1.mrna1
Chr2	gffcl	locus	31071651	31079434	.	+	.	ID=RLOC_00016033;geneIDs=comp163946_c1_seq1.path1;transcripts=comp163946_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31071651	31079434	.	+	.	ID=comp163946_c1_seq1.mrna1;geneID=comp163946_c1_seq1.path1;Name=comp163946_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=7715;mismatches=26;indels=44;unknowns=0;Target=comp163946_c1_seq1 7742 1 .;CDS_Target=comp163946_c1_seq1 2347 2090 .;locus=RLOC_00016033
Chr2	stalkie_big_nohaplotig	exon	31071651	31079434	99	+	.	Parent=comp163946_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31073740	31073997	.	+	0	Parent=comp163946_c1_seq1.mrna1
Chr2	gffcl	locus	31097775	31252647	.	+	.	ID=RLOC_00016034;geneIDs=FBgn0003091.1.path2;transcripts=FBgn0003091.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	31097775	31252647	.	+	.	ID=FBgn0003091.1.mrna2;geneID=FBgn0003091.1.path2;Name=FBgn0003091.1;Dir=sensecoverage=91.0;identity=99.5;matches=1863;mismatches=10;indels=0;unknowns=0;locus=RLOC_00016034
Chr2	stalkie_big_nohaplotig	exon	31097775	31097781	100	+	.	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 186 192 +
Chr2	stalkie_big_nohaplotig	exon	31116757	31116764	100	+	.	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 193 200 +
Chr2	stalkie_big_nohaplotig	exon	31124056	31124060	100	+	.	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 201 205 +
Chr2	stalkie_big_nohaplotig	exon	31133466	31133480	80	+	.	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 206 220 +
Chr2	stalkie_big_nohaplotig	exon	31141530	31141537	100	+	.	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 221 228 +
Chr2	stalkie_big_nohaplotig	exon	31150938	31150944	100	+	.	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 229 235 +
Chr2	stalkie_big_nohaplotig	exon	31173901	31173904	100	+	.	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 236 239 +
Chr2	stalkie_big_nohaplotig	exon	31179060	31179091	100	+	.	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 240 271 +
Chr2	stalkie_big_nohaplotig	exon	31180128	31180207	100	+	.	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 272 351 +
Chr2	stalkie_big_nohaplotig	exon	31184604	31184718	100	+	.	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 352 466 +
Chr2	stalkie_big_nohaplotig	exon	31240086	31240214	98	+	.	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 467 595 +
Chr2	stalkie_big_nohaplotig	exon	31244523	31244679	100	+	.	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 596 752 +
Chr2	stalkie_big_nohaplotig	exon	31246289	31246406	99	+	.	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 753 870 +
Chr2	stalkie_big_nohaplotig	exon	31246471	31246581	100	+	.	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 871 981 +
Chr2	stalkie_big_nohaplotig	exon	31246655	31246783	100	+	.	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 982 1110 +
Chr2	stalkie_big_nohaplotig	exon	31246902	31247075	99	+	.	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 1111 1284 +
Chr2	stalkie_big_nohaplotig	exon	31247151	31247242	98	+	.	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 1285 1376 +
Chr2	stalkie_big_nohaplotig	exon	31247531	31247732	99	+	.	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 1377 1578 +
Chr2	stalkie_big_nohaplotig	exon	31249232	31249420	100	+	.	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 1579 1767 +
Chr2	stalkie_big_nohaplotig	exon	31252248	31252388	99	+	.	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 1768 1908 +
Chr2	stalkie_big_nohaplotig	exon	31252498	31252647	100	+	.	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 1909 2058 +
Chr2	stalkie_big_nohaplotig	CDS	31097775	31097781	.	+	2	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 186 192 +
Chr2	stalkie_big_nohaplotig	CDS	31116757	31116764	.	+	1	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 193 200 +
Chr2	stalkie_big_nohaplotig	CDS	31124056	31124060	.	+	2	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 201 205 +
Chr2	stalkie_big_nohaplotig	CDS	31133466	31133480	.	+	0	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 206 220 +
Chr2	stalkie_big_nohaplotig	CDS	31141530	31141537	.	+	0	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 221 228 +
Chr2	stalkie_big_nohaplotig	CDS	31150938	31150944	.	+	1	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 229 235 +
Chr2	stalkie_big_nohaplotig	CDS	31173901	31173904	.	+	0	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 236 239 +
Chr2	stalkie_big_nohaplotig	CDS	31179060	31179091	.	+	2	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 240 271 +
Chr2	stalkie_big_nohaplotig	CDS	31180128	31180207	.	+	0	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 272 351 +
Chr2	stalkie_big_nohaplotig	CDS	31184604	31184718	.	+	1	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 352 466 +
Chr2	stalkie_big_nohaplotig	CDS	31240086	31240214	.	+	0	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 467 595 +
Chr2	stalkie_big_nohaplotig	CDS	31244523	31244679	.	+	0	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 596 752 +
Chr2	stalkie_big_nohaplotig	CDS	31246289	31246406	.	+	2	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 753 870 +
Chr2	stalkie_big_nohaplotig	CDS	31246471	31246581	.	+	1	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 871 981 +
Chr2	stalkie_big_nohaplotig	CDS	31246655	31246783	.	+	1	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 982 1110 +
Chr2	stalkie_big_nohaplotig	CDS	31246902	31247075	.	+	1	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 1111 1284 +
Chr2	stalkie_big_nohaplotig	CDS	31247151	31247242	.	+	1	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 1285 1376 +
Chr2	stalkie_big_nohaplotig	CDS	31247531	31247732	.	+	2	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 1377 1578 +
Chr2	stalkie_big_nohaplotig	CDS	31249232	31249420	.	+	1	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 1579 1767 +
Chr2	stalkie_big_nohaplotig	CDS	31252248	31252388	.	+	1	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 1768 1908 +
Chr2	stalkie_big_nohaplotig	CDS	31252498	31252647	.	+	1	Parent=FBgn0003091.1.mrna2;Target=FBgn0003091.1 1909 2058 +
Chr2	gffcl	locus	31226663	31229119	.	-	.	ID=RLOC_00016035;geneIDs=ORF913.path1;transcripts=ORF913.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31226663	31229119	.	-	.	ID=ORF913.mrna1;geneID=ORF913.path1;Name=ORF913;Dir=sensecoverage=100.0;identity=100.0;matches=1350;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016035
Chr2	stalkie_big_nohaplotig	exon	31226663	31227257	100	-	.	Parent=ORF913.mrna1;Target=ORF913 756 1350 +
Chr2	stalkie_big_nohaplotig	exon	31227321	31228059	100	-	.	Parent=ORF913.mrna1;Target=ORF913 17 755 +
Chr2	stalkie_big_nohaplotig	exon	31229104	31229119	100	-	.	Parent=ORF913.mrna1;Target=ORF913 1 16 +
Chr2	stalkie_big_nohaplotig	CDS	31226663	31227257	.	-	1	Parent=ORF913.mrna1;Target=ORF913 756 1350 +
Chr2	stalkie_big_nohaplotig	CDS	31227321	31228059	.	-	2	Parent=ORF913.mrna1;Target=ORF913 17 755 +
Chr2	stalkie_big_nohaplotig	CDS	31229104	31229119	.	-	0	Parent=ORF913.mrna1;Target=ORF913 1 16 +
Chr2	gffcl	locus	31258630	31260067	.	-	.	ID=RLOC_00016036;geneIDs=comp159616_c0_seq1.path1;transcripts=comp159616_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31258630	31260067	.	-	.	ID=comp159616_c0_seq1.mrna1;geneID=comp159616_c0_seq1.path1;Name=comp159616_c0_seq1;Dir=indeterminatecoverage=96.4;identity=93.9;matches=1268;mismatches=33;indels=49;unknowns=0;Target=comp159616_c0_seq1 754 608 .;locus=RLOC_00016036
Chr2	stalkie_big_nohaplotig	exon	31258630	31259080	96	-	.	Parent=comp159616_c0_seq1.mrna1;Target=comp159616_c0_seq1 1364 911 .
Chr2	stalkie_big_nohaplotig	exon	31259182	31260067	92	-	.	Parent=comp159616_c0_seq1.mrna1;Target=comp159616_c0_seq1 904 45 .
Chr2	stalkie_big_nohaplotig	CDS	31259332	31259478	.	-	0	Parent=comp159616_c0_seq1.mrna1
Chr2	gffcl	locus	31260091	31260586	.	+	.	ID=RLOC_00016037;geneIDs=comp117281_c0_seq1.path1;transcripts=comp117281_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31260091	31260586	.	+	.	ID=comp117281_c0_seq1.mrna1;geneID=comp117281_c0_seq1.path1;Name=comp117281_c0_seq1;Dir=indeterminatecoverage=94.6;identity=97.0;matches=482;mismatches=3;indels=12;unknowns=0;Target=comp117281_c0_seq1 514 29 .;CDS_Target=comp117281_c0_seq1 106 29 .;locus=RLOC_00016037
Chr2	stalkie_big_nohaplotig	exon	31260091	31260586	96	+	.	Parent=comp117281_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31260091	31260177	.	+	0	Parent=comp117281_c0_seq1.mrna1
Chr2	gffcl	locus	31263449	31264175	.	-	.	ID=RLOC_00016038;geneIDs=comp149069_c0_seq1.path1;transcripts=comp149069_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31263449	31264175	.	-	.	ID=comp149069_c0_seq1.mrna1;geneID=comp149069_c0_seq1.path1;Name=comp149069_c0_seq1;Dir=sensecoverage=97.5;identity=93.8;matches=594;mismatches=9;indels=30;unknowns=0;locus=RLOC_00016038
Chr2	stalkie_big_nohaplotig	exon	31263449	31263915	92	-	.	Parent=comp149069_c0_seq1.mrna1;Target=comp149069_c0_seq1 142 638 +
Chr2	stalkie_big_nohaplotig	exon	31264040	31264175	100	-	.	Parent=comp149069_c0_seq1.mrna1;Target=comp149069_c0_seq1 6 141 +
Chr2	stalkie_big_nohaplotig	CDS	31263649	31263915	.	-	0	Parent=comp149069_c0_seq1.mrna1;Target=comp149069_c0_seq1 142 408 +
Chr2	stalkie_big_nohaplotig	CDS	31264040	31264042	.	-	0	Parent=comp149069_c0_seq1.mrna1;Target=comp149069_c0_seq1 139 141 +
Chr2	gffcl	locus	31273415	31274705	.	+	.	ID=RLOC_00016039;geneIDs=FBgn0034172.1.path1;transcripts=FBgn0034172.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31273415	31274705	.	+	.	ID=FBgn0034172.1.mrna1;geneID=FBgn0034172.1.path1;Name=FBgn0034172.1;Dir=sensecoverage=100.0;identity=100.0;matches=1038;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016039
Chr2	stalkie_big_nohaplotig	exon	31273415	31273663	100	+	.	Parent=FBgn0034172.1.mrna1;Target=FBgn0034172.1 1 249 +
Chr2	stalkie_big_nohaplotig	exon	31273722	31273881	100	+	.	Parent=FBgn0034172.1.mrna1;Target=FBgn0034172.1 250 409 +
Chr2	stalkie_big_nohaplotig	exon	31274017	31274233	100	+	.	Parent=FBgn0034172.1.mrna1;Target=FBgn0034172.1 410 626 +
Chr2	stalkie_big_nohaplotig	exon	31274294	31274705	100	+	.	Parent=FBgn0034172.1.mrna1;Target=FBgn0034172.1 627 1038 +
Chr2	stalkie_big_nohaplotig	CDS	31273415	31273663	.	+	0	Parent=FBgn0034172.1.mrna1;Target=FBgn0034172.1 1 249 +
Chr2	stalkie_big_nohaplotig	CDS	31273722	31273881	.	+	0	Parent=FBgn0034172.1.mrna1;Target=FBgn0034172.1 250 409 +
Chr2	stalkie_big_nohaplotig	CDS	31274017	31274233	.	+	2	Parent=FBgn0034172.1.mrna1;Target=FBgn0034172.1 410 626 +
Chr2	stalkie_big_nohaplotig	CDS	31274294	31274705	.	+	1	Parent=FBgn0034172.1.mrna1;Target=FBgn0034172.1 627 1038 +
Chr2	gffcl	locus	31275277	31276290	.	-	.	ID=RLOC_00016040;geneIDs=FBgn0001092.1.path1;transcripts=FBgn0001092.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31275277	31276290	.	-	.	ID=FBgn0001092.1.mrna1;geneID=FBgn0001092.1.path1;Name=FBgn0001092.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1012;mismatches=2;indels=0;unknowns=0;Target=FBgn0001092.1 1014 1 .;locus=RLOC_00016040
Chr2	stalkie_big_nohaplotig	exon	31275277	31276290	99	-	.	Parent=FBgn0001092.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31275277	31276290	.	-	0	Parent=FBgn0001092.1.mrna1
Chr2	gffcl	locus	31281067	31290621	.	-	.	ID=RLOC_00016041;geneIDs=FBgn0085444.1.path1;transcripts=FBgn0085444.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31281067	31290621	.	-	.	ID=FBgn0085444.1.mrna1;geneID=FBgn0085444.1.path1;Name=FBgn0085444.1;Dir=sensecoverage=100.0;identity=99.9;matches=4680;mismatches=5;indels=1;unknowns=0;locus=RLOC_00016041
Chr2	stalkie_big_nohaplotig	exon	31281067	31281460	99	-	.	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 4292 4686 +
Chr2	stalkie_big_nohaplotig	exon	31281526	31281778	100	-	.	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 4039 4291 +
Chr2	stalkie_big_nohaplotig	exon	31282177	31282635	100	-	.	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 3580 4038 +
Chr2	stalkie_big_nohaplotig	exon	31282699	31282832	100	-	.	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 3446 3579 +
Chr2	stalkie_big_nohaplotig	exon	31282960	31283992	100	-	.	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 2413 3445 +
Chr2	stalkie_big_nohaplotig	exon	31287346	31287474	100	-	.	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 2284 2412 +
Chr2	stalkie_big_nohaplotig	exon	31287531	31287876	100	-	.	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 1938 2283 +
Chr2	stalkie_big_nohaplotig	exon	31287947	31287973	100	-	.	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 1911 1937 +
Chr2	stalkie_big_nohaplotig	exon	31288029	31288986	99	-	.	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 953 1910 +
Chr2	stalkie_big_nohaplotig	exon	31289054	31289125	100	-	.	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 881 952 +
Chr2	stalkie_big_nohaplotig	exon	31289553	31289886	100	-	.	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 547 880 +
Chr2	stalkie_big_nohaplotig	exon	31289944	31290231	100	-	.	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 259 546 +
Chr2	stalkie_big_nohaplotig	exon	31290302	31290449	100	-	.	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 111 258 +
Chr2	stalkie_big_nohaplotig	exon	31290512	31290621	100	-	.	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 1 110 +
Chr2	stalkie_big_nohaplotig	CDS	31281067	31281460	.	-	2	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 4292 4686 +
Chr2	stalkie_big_nohaplotig	CDS	31281526	31281778	.	-	0	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 4039 4291 +
Chr2	stalkie_big_nohaplotig	CDS	31282177	31282635	.	-	0	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 3580 4038 +
Chr2	stalkie_big_nohaplotig	CDS	31282699	31282832	.	-	2	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 3446 3579 +
Chr2	stalkie_big_nohaplotig	CDS	31282960	31283992	.	-	0	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 2413 3445 +
Chr2	stalkie_big_nohaplotig	CDS	31287346	31287474	.	-	0	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 2284 2412 +
Chr2	stalkie_big_nohaplotig	CDS	31287531	31287876	.	-	1	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 1938 2283 +
Chr2	stalkie_big_nohaplotig	CDS	31287947	31287973	.	-	1	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 1911 1937 +
Chr2	stalkie_big_nohaplotig	CDS	31288029	31288986	.	-	2	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 953 1910 +
Chr2	stalkie_big_nohaplotig	CDS	31289054	31289125	.	-	2	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 881 952 +
Chr2	stalkie_big_nohaplotig	CDS	31289553	31289886	.	-	0	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 547 880 +
Chr2	stalkie_big_nohaplotig	CDS	31289944	31290231	.	-	0	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 259 546 +
Chr2	stalkie_big_nohaplotig	CDS	31290302	31290449	.	-	1	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 111 258 +
Chr2	stalkie_big_nohaplotig	CDS	31290512	31290621	.	-	0	Parent=FBgn0085444.1.mrna1;Target=FBgn0085444.1 1 110 +
Chr2	gffcl	locus	31286048	31286320	.	+	.	ID=RLOC_00016042;geneIDs=FBgn0085220.2.path1;transcripts=FBgn0085220.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31286048	31286320	.	+	.	ID=FBgn0085220.2.mrna1;geneID=FBgn0085220.2.path1;Name=FBgn0085220.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=273;mismatches=0;indels=0;unknowns=0;Target=FBgn0085220.2 273 1 .;locus=RLOC_00016042
Chr2	stalkie_big_nohaplotig	exon	31286048	31286320	100	+	.	Parent=FBgn0085220.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31286048	31286320	.	+	0	Parent=FBgn0085220.2.mrna1
Chr2	gffcl	locus	31292359	31294388	.	+	.	ID=RLOC_00016043;geneIDs=FBgn0034176.1.path1;transcripts=FBgn0034176.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31292359	31294388	.	+	.	ID=FBgn0034176.1.mrna1;geneID=FBgn0034176.1.path1;Name=FBgn0034176.1;Dir=sensecoverage=100.0;identity=100.0;matches=1365;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016043
Chr2	stalkie_big_nohaplotig	exon	31292359	31292454	100	+	.	Parent=FBgn0034176.1.mrna1;Target=FBgn0034176.1 1 96 +
Chr2	stalkie_big_nohaplotig	exon	31293120	31294388	100	+	.	Parent=FBgn0034176.1.mrna1;Target=FBgn0034176.1 97 1365 +
Chr2	stalkie_big_nohaplotig	CDS	31292359	31292454	.	+	0	Parent=FBgn0034176.1.mrna1;Target=FBgn0034176.1 1 96 +
Chr2	stalkie_big_nohaplotig	CDS	31293120	31294388	.	+	0	Parent=FBgn0034176.1.mrna1;Target=FBgn0034176.1 97 1365 +
Chr2	gffcl	locus	31296647	31297882	.	-	.	ID=RLOC_00016044;geneIDs=comp150479_c0_seq1.path1,comp187819_c0_seq1.path1;transcripts=comp150479_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31296971	31297882	.	-	.	ID=comp150479_c0_seq1.mrna1;geneID=comp150479_c0_seq1.path1;Name=comp150479_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=902;mismatches=8;indels=2;unknowns=0;Target=comp150479_c0_seq1 910 1 .;CDS_Target=comp150479_c0_seq1 45 1 .;locus=RLOC_00016044
Chr2	stalkie_big_nohaplotig	exon	31296971	31297882	98	-	.	Parent=comp150479_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31297838	31297882	.	-	0	Parent=comp150479_c0_seq1.mrna1
Chr2	gffcl	locus	31304132	31306277	.	+	.	ID=RLOC_00016045;geneIDs=comp148038_c0_seq1.path1,comp148285_c0_seq1.path1;transcripts=comp148038_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31305160	31306277	.	+	.	ID=comp148038_c0_seq1.mrna1;geneID=comp148038_c0_seq1.path1;Name=comp148038_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.8;matches=1116;mismatches=2;indels=0;unknowns=0;Target=comp148038_c0_seq1 1118 1 .;CDS_Target=comp148038_c0_seq1 391 296 .;locus=RLOC_00016045
Chr2	stalkie_big_nohaplotig	exon	31305160	31306277	99	+	.	Parent=comp148038_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31305455	31305550	.	+	0	Parent=comp148038_c0_seq1.mrna1
Chr2	gffcl	locus	31307274	31397836	.	-	.	ID=RLOC_00016046;geneIDs=FBgn0004580.1.path1;transcripts=FBgn0004580.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31307274	31397836	.	-	.	ID=FBgn0004580.1.mrna1;geneID=FBgn0004580.1.path1;Name=FBgn0004580.1;Dir=sensecoverage=99.6;identity=100.0;matches=822;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016046
Chr2	stalkie_big_nohaplotig	exon	31307274	31307345	100	-	.	Parent=FBgn0004580.1.mrna1;Target=FBgn0004580.1 751 822 +
Chr2	stalkie_big_nohaplotig	exon	31311953	31312009	100	-	.	Parent=FBgn0004580.1.mrna1;Target=FBgn0004580.1 694 750 +
Chr2	stalkie_big_nohaplotig	exon	31339100	31339105	100	-	.	Parent=FBgn0004580.1.mrna1;Target=FBgn0004580.1 688 693 +
Chr2	stalkie_big_nohaplotig	exon	31361072	31361117	100	-	.	Parent=FBgn0004580.1.mrna1;Target=FBgn0004580.1 642 687 +
Chr2	stalkie_big_nohaplotig	exon	31361222	31361277	100	-	.	Parent=FBgn0004580.1.mrna1;Target=FBgn0004580.1 586 641 +
Chr2	stalkie_big_nohaplotig	exon	31369335	31369475	100	-	.	Parent=FBgn0004580.1.mrna1;Target=FBgn0004580.1 445 585 +
Chr2	stalkie_big_nohaplotig	exon	31372474	31372560	100	-	.	Parent=FBgn0004580.1.mrna1;Target=FBgn0004580.1 358 444 +
Chr2	stalkie_big_nohaplotig	exon	31387166	31387255	100	-	.	Parent=FBgn0004580.1.mrna1;Target=FBgn0004580.1 268 357 +
Chr2	stalkie_big_nohaplotig	exon	31396797	31396882	100	-	.	Parent=FBgn0004580.1.mrna1;Target=FBgn0004580.1 182 267 +
Chr2	stalkie_big_nohaplotig	exon	31397656	31397836	100	-	.	Parent=FBgn0004580.1.mrna1;Target=FBgn0004580.1 1 181 +
Chr2	stalkie_big_nohaplotig	CDS	31307274	31307345	.	-	0	Parent=FBgn0004580.1.mrna1;Target=FBgn0004580.1 751 822 +
Chr2	stalkie_big_nohaplotig	CDS	31311953	31312009	.	-	0	Parent=FBgn0004580.1.mrna1;Target=FBgn0004580.1 694 750 +
Chr2	stalkie_big_nohaplotig	CDS	31339100	31339105	.	-	0	Parent=FBgn0004580.1.mrna1;Target=FBgn0004580.1 688 693 +
Chr2	stalkie_big_nohaplotig	CDS	31361072	31361117	.	-	1	Parent=FBgn0004580.1.mrna1;Target=FBgn0004580.1 642 687 +
Chr2	stalkie_big_nohaplotig	CDS	31361222	31361277	.	-	0	Parent=FBgn0004580.1.mrna1;Target=FBgn0004580.1 586 641 +
Chr2	stalkie_big_nohaplotig	CDS	31369335	31369475	.	-	0	Parent=FBgn0004580.1.mrna1;Target=FBgn0004580.1 445 585 +
Chr2	stalkie_big_nohaplotig	CDS	31372474	31372560	.	-	0	Parent=FBgn0004580.1.mrna1;Target=FBgn0004580.1 358 444 +
Chr2	stalkie_big_nohaplotig	CDS	31387166	31387255	.	-	0	Parent=FBgn0004580.1.mrna1;Target=FBgn0004580.1 268 357 +
Chr2	stalkie_big_nohaplotig	CDS	31396797	31396882	.	-	2	Parent=FBgn0004580.1.mrna1;Target=FBgn0004580.1 182 267 +
Chr2	stalkie_big_nohaplotig	CDS	31397656	31397836	.	-	0	Parent=FBgn0004580.1.mrna1;Target=FBgn0004580.1 1 181 +
Chr2	gffcl	locus	31312590	31313376	.	-	.	ID=RLOC_00016047;geneIDs=comp147865_c0_seq1.path1;transcripts=comp147865_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31312590	31313376	.	-	.	ID=comp147865_c0_seq1.mrna1;geneID=comp147865_c0_seq1.path1;Name=comp147865_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=771;mismatches=12;indels=4;unknowns=0;Target=comp147865_c0_seq1 783 1 .;CDS_Target=comp147865_c0_seq1 678 571 .;locus=RLOC_00016047
Chr2	stalkie_big_nohaplotig	exon	31312590	31313376	97	-	.	Parent=comp147865_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31312695	31312802	.	-	0	Parent=comp147865_c0_seq1.mrna1
Chr2	gffcl	locus	31381434	31382055	.	+	.	ID=RLOC_00016048;geneIDs=comp135855_c0_seq1.path1;transcripts=comp135855_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31381434	31382055	.	+	.	ID=comp135855_c0_seq1.mrna1;geneID=comp135855_c0_seq1.path1;Name=comp135855_c0_seq1;Dir=antisensecoverage=95.9;identity=99.8;matches=567;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016048
Chr2	stalkie_big_nohaplotig	exon	31381434	31381518	100	+	.	Parent=comp135855_c0_seq1.mrna1;Target=comp135855_c0_seq1 498 582 -
Chr2	stalkie_big_nohaplotig	exon	31381573	31382055	99	+	.	Parent=comp135855_c0_seq1.mrna1;Target=comp135855_c0_seq1 15 497 -
Chr2	stalkie_big_nohaplotig	CDS	31381516	31381518	.	+	0	Parent=comp135855_c0_seq1.mrna1;Target=comp135855_c0_seq1 498 500 .
Chr2	stalkie_big_nohaplotig	CDS	31381573	31381914	.	+	0	Parent=comp135855_c0_seq1.mrna1;Target=comp135855_c0_seq1 156 497 .
Chr2	gffcl	locus	31406752	31407849	.	+	.	ID=RLOC_00016049;geneIDs=comp145285_c0_seq1.path1;transcripts=comp145285_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31406752	31407849	.	+	.	ID=comp145285_c0_seq1.mrna1;geneID=comp145285_c0_seq1.path1;Name=comp145285_c0_seq1;Dir=sensecoverage=96.0;identity=99.9;matches=989;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016049
Chr2	stalkie_big_nohaplotig	exon	31406752	31406893	100	+	.	Parent=comp145285_c0_seq1.mrna1;Target=comp145285_c0_seq1 2 143 +
Chr2	stalkie_big_nohaplotig	exon	31406948	31407313	100	+	.	Parent=comp145285_c0_seq1.mrna1;Target=comp145285_c0_seq1 144 509 +
Chr2	stalkie_big_nohaplotig	exon	31407368	31407849	99	+	.	Parent=comp145285_c0_seq1.mrna1;Target=comp145285_c0_seq1 510 991 +
Chr2	stalkie_big_nohaplotig	CDS	31406879	31406893	.	+	0	Parent=comp145285_c0_seq1.mrna1;Target=comp145285_c0_seq1 129 143 +
Chr2	stalkie_big_nohaplotig	CDS	31406948	31407313	.	+	0	Parent=comp145285_c0_seq1.mrna1;Target=comp145285_c0_seq1 144 509 +
Chr2	stalkie_big_nohaplotig	CDS	31407368	31407619	.	+	0	Parent=comp145285_c0_seq1.mrna1;Target=comp145285_c0_seq1 510 761 +
Chr2	gffcl	locus	31442758	31443440	.	+	.	ID=RLOC_00016051;geneIDs=comp145633_c0_seq1.path1;transcripts=comp145633_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31442758	31443440	.	+	.	ID=comp145633_c0_seq1.mrna1;geneID=comp145633_c0_seq1.path1;Name=comp145633_c0_seq1;Dir=sensecoverage=99.5;identity=98.6;matches=624;mismatches=9;indels=0;unknowns=0;locus=RLOC_00016051
Chr2	stalkie_big_nohaplotig	exon	31442758	31442911	98	+	.	Parent=comp145633_c0_seq1.mrna1;Target=comp145633_c0_seq1 2 155 +
Chr2	stalkie_big_nohaplotig	exon	31442962	31443440	98	+	.	Parent=comp145633_c0_seq1.mrna1;Target=comp145633_c0_seq1 156 634 +
Chr2	stalkie_big_nohaplotig	CDS	31442909	31442911	.	+	0	Parent=comp145633_c0_seq1.mrna1;Target=comp145633_c0_seq1 153 155 +
Chr2	stalkie_big_nohaplotig	CDS	31442962	31443297	.	+	0	Parent=comp145633_c0_seq1.mrna1;Target=comp145633_c0_seq1 156 491 +
Chr2	gffcl	locus	31485161	31489778	.	+	.	ID=RLOC_00016052;geneIDs=FBgn0035360.1.path1;transcripts=FBgn0035360.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31485161	31489778	.	+	.	ID=FBgn0035360.1.mrna1;geneID=FBgn0035360.1.path1;Name=FBgn0035360.1;Dir=sensecoverage=100.0;identity=99.9;matches=1403;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016052
Chr2	stalkie_big_nohaplotig	exon	31485161	31485238	100	+	.	Parent=FBgn0035360.1.mrna1;Target=FBgn0035360.1 1 78 +
Chr2	stalkie_big_nohaplotig	exon	31488198	31488321	100	+	.	Parent=FBgn0035360.1.mrna1;Target=FBgn0035360.1 79 202 +
Chr2	stalkie_big_nohaplotig	exon	31488392	31488556	100	+	.	Parent=FBgn0035360.1.mrna1;Target=FBgn0035360.1 203 367 +
Chr2	stalkie_big_nohaplotig	exon	31488619	31488752	100	+	.	Parent=FBgn0035360.1.mrna1;Target=FBgn0035360.1 368 501 +
Chr2	stalkie_big_nohaplotig	exon	31488812	31489009	99	+	.	Parent=FBgn0035360.1.mrna1;Target=FBgn0035360.1 502 699 +
Chr2	stalkie_big_nohaplotig	exon	31489074	31489778	100	+	.	Parent=FBgn0035360.1.mrna1;Target=FBgn0035360.1 700 1404 +
Chr2	stalkie_big_nohaplotig	CDS	31485161	31485238	.	+	0	Parent=FBgn0035360.1.mrna1;Target=FBgn0035360.1 1 78 +
Chr2	stalkie_big_nohaplotig	CDS	31488198	31488321	.	+	0	Parent=FBgn0035360.1.mrna1;Target=FBgn0035360.1 79 202 +
Chr2	stalkie_big_nohaplotig	CDS	31488392	31488556	.	+	2	Parent=FBgn0035360.1.mrna1;Target=FBgn0035360.1 203 367 +
Chr2	stalkie_big_nohaplotig	CDS	31488619	31488752	.	+	2	Parent=FBgn0035360.1.mrna1;Target=FBgn0035360.1 368 501 +
Chr2	stalkie_big_nohaplotig	CDS	31488812	31489009	.	+	0	Parent=FBgn0035360.1.mrna1;Target=FBgn0035360.1 502 699 +
Chr2	stalkie_big_nohaplotig	CDS	31489074	31489778	.	+	0	Parent=FBgn0035360.1.mrna1;Target=FBgn0035360.1 700 1404 +
Chr2	gffcl	locus	31490223	31490528	.	-	.	ID=RLOC_00016053;geneIDs=FBgn0083953.1.path1;transcripts=FBgn0083953.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31490223	31490528	.	-	.	ID=FBgn0083953.1.mrna1;geneID=FBgn0083953.1.path1;Name=FBgn0083953.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=305;mismatches=1;indels=0;unknowns=0;Target=FBgn0083953.1 306 1 .;locus=RLOC_00016053
Chr2	stalkie_big_nohaplotig	exon	31490223	31490528	99	-	.	Parent=FBgn0083953.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31490223	31490528	.	-	0	Parent=FBgn0083953.1.mrna1
Chr2	gffcl	locus	31491806	31493305	.	+	.	ID=RLOC_00016054;geneIDs=FBgn0020766.1.path1;transcripts=FBgn0020766.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31491806	31493305	.	+	.	ID=FBgn0020766.1.mrna1;geneID=FBgn0020766.1.path1;Name=FBgn0020766.1;Dir=sensecoverage=100.0;identity=99.6;matches=1437;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016054
Chr2	stalkie_big_nohaplotig	exon	31491806	31493083	99	+	.	Parent=FBgn0020766.1.mrna1;Target=FBgn0020766.1 1 1278 +
Chr2	stalkie_big_nohaplotig	exon	31493141	31493305	99	+	.	Parent=FBgn0020766.1.mrna1;Target=FBgn0020766.1 1279 1443 +
Chr2	stalkie_big_nohaplotig	CDS	31491806	31493083	.	+	0	Parent=FBgn0020766.1.mrna1;Target=FBgn0020766.1 1 1278 +
Chr2	stalkie_big_nohaplotig	CDS	31493141	31493305	.	+	0	Parent=FBgn0020766.1.mrna1;Target=FBgn0020766.1 1279 1443 +
Chr2	gffcl	locus	31493345	31522860	.	-	.	ID=RLOC_00016055;geneIDs=comp147922_c0_seq1.path1,comp161198_c0_seq1.path1;transcripts=comp147922_c0_seq1.mrna1,comp161198_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31493345	31522860	.	-	.	ID=comp147922_c0_seq1.mrna1;geneID=comp147922_c0_seq1.path1;Name=comp147922_c0_seq1;Dir=indeterminatecoverage=89.0;identity=91.6;matches=964;mismatches=27;indels=61;unknowns=0;locus=RLOC_00016055
Chr2	stalkie_big_nohaplotig	exon	31493345	31494131	97	-	.	Parent=comp147922_c0_seq1.mrna1;Target=comp147922_c0_seq1 1188 405 .
Chr2	stalkie_big_nohaplotig	exon	31494233	31494272	100	-	.	Parent=comp147922_c0_seq1.mrna1;Target=comp147922_c0_seq1 404 365 .
Chr2	stalkie_big_nohaplotig	exon	31494365	31494414	98	-	.	Parent=comp147922_c0_seq1.mrna1;Target=comp147922_c0_seq1 364 315 .
Chr2	stalkie_big_nohaplotig	exon	31498901	31498908	100	-	.	Parent=comp147922_c0_seq1.mrna1;Target=comp147922_c0_seq1 314 307 .
Chr2	stalkie_big_nohaplotig	exon	31509126	31509179	47	-	.	Parent=comp147922_c0_seq1.mrna1;Target=comp147922_c0_seq1 306 217 .
Chr2	stalkie_big_nohaplotig	exon	31509641	31509650	90	-	.	Parent=comp147922_c0_seq1.mrna1;Target=comp147922_c0_seq1 216 207 .
Chr2	stalkie_big_nohaplotig	exon	31511069	31511078	31	-	.	Parent=comp147922_c0_seq1.mrna1;Target=comp147922_c0_seq1 206 175 .
Chr2	stalkie_big_nohaplotig	exon	31513728	31513738	100	-	.	Parent=comp147922_c0_seq1.mrna1;Target=comp147922_c0_seq1 174 164 .
Chr2	stalkie_big_nohaplotig	exon	31518693	31518701	88	-	.	Parent=comp147922_c0_seq1.mrna1;Target=comp147922_c0_seq1 148 140 .
Chr2	stalkie_big_nohaplotig	exon	31521801	31521805	100	-	.	Parent=comp147922_c0_seq1.mrna1;Target=comp147922_c0_seq1 139 135 .
Chr2	stalkie_big_nohaplotig	exon	31522852	31522860	100	-	.	Parent=comp147922_c0_seq1.mrna1;Target=comp147922_c0_seq1 134 126 .
Chr2	stalkie_big_nohaplotig	CDS	31518693	31518701	.	-	1	Parent=comp147922_c0_seq1.mrna1;Target=comp147922_c0_seq1 148 140 .
Chr2	stalkie_big_nohaplotig	CDS	31521801	31521805	.	-	0	Parent=comp147922_c0_seq1.mrna1;Target=comp147922_c0_seq1 139 135 .
Chr2	stalkie_big_nohaplotig	CDS	31522852	31522860	.	-	0	Parent=comp147922_c0_seq1.mrna1;Target=comp147922_c0_seq1 134 126 .
Chr2	stalkie_big_nohaplotig	mRNA	31497713	31500078	.	-	.	ID=comp161198_c0_seq1.mrna1;geneID=comp161198_c0_seq1.path1;Name=comp161198_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.0;matches=2291;mismatches=64;indels=31;unknowns=0;Target=comp161198_c0_seq1 2375 1 .;CDS_Target=comp161198_c0_seq1 975 832 .;locus=RLOC_00016055
Chr2	stalkie_big_nohaplotig	exon	31497713	31500078	96	-	.	Parent=comp161198_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31499114	31499257	.	-	0	Parent=comp161198_c0_seq1.mrna1
Chr2	gffcl	locus	31495496	31495842	.	+	.	ID=RLOC_00016056;geneIDs=FBgn0250838.1.path1;transcripts=FBgn0250838.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31495496	31495842	.	+	.	ID=FBgn0250838.1.mrna1;geneID=FBgn0250838.1.path1;Name=FBgn0250838.1;Dir=sensecoverage=100.0;identity=99.0;matches=285;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016056
Chr2	stalkie_big_nohaplotig	exon	31495496	31495715	98	+	.	Parent=FBgn0250838.1.mrna1;Target=FBgn0250838.1 1 220 +
Chr2	stalkie_big_nohaplotig	exon	31495775	31495842	100	+	.	Parent=FBgn0250838.1.mrna1;Target=FBgn0250838.1 221 288 +
Chr2	stalkie_big_nohaplotig	CDS	31495496	31495715	.	+	0	Parent=FBgn0250838.1.mrna1;Target=FBgn0250838.1 1 220 +
Chr2	stalkie_big_nohaplotig	CDS	31495775	31495842	.	+	2	Parent=FBgn0250838.1.mrna1;Target=FBgn0250838.1 221 288 +
Chr2	gffcl	locus	31500246	31501662	.	+	.	ID=RLOC_00016057;geneIDs=FBgn0025790.2.path1;transcripts=FBgn0025790.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31500246	31501662	.	+	.	ID=FBgn0025790.2.mrna1;geneID=FBgn0025790.2.path1;Name=FBgn0025790.2;Dir=sensecoverage=100.0;identity=98.1;matches=1157;mismatches=22;indels=0;unknowns=0;locus=RLOC_00016057
Chr2	stalkie_big_nohaplotig	exon	31500246	31500504	96	+	.	Parent=FBgn0025790.2.mrna1;Target=FBgn0025790.2 1 259 +
Chr2	stalkie_big_nohaplotig	exon	31500569	31500876	98	+	.	Parent=FBgn0025790.2.mrna1;Target=FBgn0025790.2 260 567 +
Chr2	stalkie_big_nohaplotig	exon	31500935	31501142	100	+	.	Parent=FBgn0025790.2.mrna1;Target=FBgn0025790.2 568 775 +
Chr2	stalkie_big_nohaplotig	exon	31501198	31501245	97	+	.	Parent=FBgn0025790.2.mrna1;Target=FBgn0025790.2 776 823 +
Chr2	stalkie_big_nohaplotig	exon	31501307	31501662	97	+	.	Parent=FBgn0025790.2.mrna1;Target=FBgn0025790.2 824 1179 +
Chr2	stalkie_big_nohaplotig	CDS	31500246	31500504	.	+	0	Parent=FBgn0025790.2.mrna1;Target=FBgn0025790.2 1 259 +
Chr2	stalkie_big_nohaplotig	CDS	31500569	31500876	.	+	2	Parent=FBgn0025790.2.mrna1;Target=FBgn0025790.2 260 567 +
Chr2	stalkie_big_nohaplotig	CDS	31500935	31501142	.	+	0	Parent=FBgn0025790.2.mrna1;Target=FBgn0025790.2 568 775 +
Chr2	stalkie_big_nohaplotig	CDS	31501198	31501245	.	+	2	Parent=FBgn0025790.2.mrna1;Target=FBgn0025790.2 776 823 +
Chr2	stalkie_big_nohaplotig	CDS	31501307	31501662	.	+	2	Parent=FBgn0025790.2.mrna1;Target=FBgn0025790.2 824 1179 +
Chr2	gffcl	locus	31504191	31504944	.	+	.	ID=RLOC_00016058;geneIDs=FBgn0003942.path1,comp61140_c0_seq1.path1;transcripts=FBgn0003942.mrna1,comp61140_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31504191	31504944	.	+	.	ID=FBgn0003942.mrna1;geneID=FBgn0003942.path1;Name=FBgn0003942;Dir=sensecoverage=100.0;identity=99.4;matches=480;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016058
Chr2	stalkie_big_nohaplotig	exon	31504191	31504526	99	+	.	Parent=FBgn0003942.mrna1;Target=FBgn0003942 1 336 +
Chr2	stalkie_big_nohaplotig	exon	31504798	31504944	98	+	.	Parent=FBgn0003942.mrna1;Target=FBgn0003942 337 483 +
Chr2	stalkie_big_nohaplotig	CDS	31504191	31504526	.	+	0	Parent=FBgn0003942.mrna1;Target=FBgn0003942 1 336 +
Chr2	stalkie_big_nohaplotig	CDS	31504798	31504944	.	+	0	Parent=FBgn0003942.mrna1;Target=FBgn0003942 337 483 +
Chr2	stalkie_big_nohaplotig	mRNA	31504506	31504818	.	+	.	ID=comp61140_c0_seq1.mrna1;geneID=comp61140_c0_seq1.path1;Name=comp61140_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=309;mismatches=4;indels=0;unknowns=0;Target=comp61140_c0_seq1 313 1 .;CDS_Target=comp61140_c0_seq1 290 183 .;locus=RLOC_00016058
Chr2	stalkie_big_nohaplotig	exon	31504506	31504818	98	+	.	Parent=comp61140_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31504688	31504795	.	+	0	Parent=comp61140_c0_seq1.mrna1
Chr2	gffcl	locus	31505365	31506138	.	-	.	ID=RLOC_00016059;geneIDs=FBgn0030931.1.path1;transcripts=FBgn0030931.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31505365	31506138	.	-	.	ID=FBgn0030931.1.mrna1;geneID=FBgn0030931.1.path1;Name=FBgn0030931.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=772;mismatches=2;indels=0;unknowns=0;Target=FBgn0030931.1 774 1 .;locus=RLOC_00016059
Chr2	stalkie_big_nohaplotig	exon	31505365	31506138	99	-	.	Parent=FBgn0030931.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31505365	31506138	.	-	0	Parent=FBgn0030931.1.mrna1
Chr2	gffcl	locus	31507668	31509017	.	+	.	ID=RLOC_00016060;geneIDs=FBgn0015562.1.path1;transcripts=FBgn0015562.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31507668	31509017	.	+	.	ID=FBgn0015562.1.mrna1;geneID=FBgn0015562.1.path1;Name=FBgn0015562.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1343;mismatches=7;indels=0;unknowns=0;Target=FBgn0015562.1 1350 1 .;locus=RLOC_00016060
Chr2	stalkie_big_nohaplotig	exon	31507668	31509017	99	+	.	Parent=FBgn0015562.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31507668	31509017	.	+	0	Parent=FBgn0015562.1.mrna1
Chr2	gffcl	locus	31511296	31531171	.	.	.	ID=RLOC_00016061;geneIDs=FBgn0013770.1.path1,comp80166_c0_seq1.path1,comp157303_c0_seq1.path1;transcripts=FBgn0013770.1.mrna1,comp157303_c0_seq1.mrna1,comp80166_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31511296	31531171	.	-	.	ID=FBgn0013770.1.mrna1;geneID=FBgn0013770.1.path1;Name=FBgn0013770.1;Dir=sensecoverage=100.0;identity=99.8;matches=1081;mismatches=1;indels=1;unknowns=0;Target=FBgn0013770.1 3 38 +;locus=RLOC_00016061
Chr2	stalkie_big_nohaplotig	exon	31511296	31511891	100	-	.	Parent=FBgn0013770.1.mrna1;Target=FBgn0013770.1 488 1083 +
Chr2	stalkie_big_nohaplotig	exon	31513098	31513210	100	-	.	Parent=FBgn0013770.1.mrna1;Target=FBgn0013770.1 375 487 +
Chr2	stalkie_big_nohaplotig	exon	31513282	31513496	100	-	.	Parent=FBgn0013770.1.mrna1;Target=FBgn0013770.1 160 374 +
Chr2	stalkie_big_nohaplotig	exon	31525003	31525105	100	-	.	Parent=FBgn0013770.1.mrna1;Target=FBgn0013770.1 57 159 +
Chr2	stalkie_big_nohaplotig	exon	31531117	31531171	96	-	.	Parent=FBgn0013770.1.mrna1;Target=FBgn0013770.1 1 56 +
Chr2	stalkie_big_nohaplotig	CDS	31531135	31531169	.	-	0	Parent=FBgn0013770.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31511948	31513120	.	+	.	ID=comp157303_c0_seq1.mrna1;geneID=comp157303_c0_seq1.path1;Name=comp157303_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.4;matches=1126;mismatches=26;indels=67;unknowns=0;Target=comp157303_c0_seq1 1198 1 .;CDS_Target=comp157303_c0_seq1 401 294 .;locus=RLOC_00016061
Chr2	stalkie_big_nohaplotig	exon	31511948	31513120	92	+	.	Parent=comp157303_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31512241	31512348	.	+	0	Parent=comp157303_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31513479	31522756	.	-	.	ID=comp80166_c0_seq1.mrna1;geneID=comp80166_c0_seq1.path1;Name=comp80166_c0_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=638;mismatches=6;indels=0;unknowns=0;Target=comp80166_c0_seq1 482 643 .;locus=RLOC_00016061
Chr2	stalkie_big_nohaplotig	exon	31513479	31513496	100	-	.	Parent=comp80166_c0_seq1.mrna1;Target=comp80166_c0_seq1 1 18 -
Chr2	stalkie_big_nohaplotig	exon	31522131	31522756	99	-	.	Parent=comp80166_c0_seq1.mrna1;Target=comp80166_c0_seq1 19 644 -
Chr2	stalkie_big_nohaplotig	CDS	31522594	31522755	.	-	0	Parent=comp80166_c0_seq1.mrna1
Chr2	gffcl	locus	31514780	31515859	.	-	.	ID=RLOC_00016062;geneIDs=comp150767_c0_seq1.path1;transcripts=comp150767_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31514780	31515859	.	-	.	ID=comp150767_c0_seq1.mrna1;geneID=comp150767_c0_seq1.path1;Name=comp150767_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.8;matches=1002;mismatches=72;indels=6;unknowns=0;Target=comp150767_c0_seq1 1074 1 .;CDS_Target=comp150767_c0_seq1 156 142 .;locus=RLOC_00016062
Chr2	stalkie_big_nohaplotig	exon	31514780	31515859	92	-	.	Parent=comp150767_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31515704	31515718	.	-	0	Parent=comp150767_c0_seq1.mrna1
Chr2	gffcl	locus	31535546	31546907	.	+	.	ID=RLOC_00016063;geneIDs=FBgn0033872.1.path1;transcripts=FBgn0033872.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31535546	31546907	.	+	.	ID=FBgn0033872.1.mrna1;geneID=FBgn0033872.1.path1;Name=FBgn0033872.1;Dir=sensecoverage=100.0;identity=99.8;matches=503;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016063
Chr2	stalkie_big_nohaplotig	exon	31535546	31535621	100	+	.	Parent=FBgn0033872.1.mrna1;Target=FBgn0033872.1 1 76 +
Chr2	stalkie_big_nohaplotig	exon	31545786	31545953	100	+	.	Parent=FBgn0033872.1.mrna1;Target=FBgn0033872.1 77 244 +
Chr2	stalkie_big_nohaplotig	exon	31546648	31546907	99	+	.	Parent=FBgn0033872.1.mrna1;Target=FBgn0033872.1 245 504 +
Chr2	stalkie_big_nohaplotig	CDS	31535546	31535621	.	+	0	Parent=FBgn0033872.1.mrna1;Target=FBgn0033872.1 1 76 +
Chr2	stalkie_big_nohaplotig	CDS	31545786	31545953	.	+	2	Parent=FBgn0033872.1.mrna1;Target=FBgn0033872.1 77 244 +
Chr2	stalkie_big_nohaplotig	CDS	31546648	31546907	.	+	2	Parent=FBgn0033872.1.mrna1;Target=FBgn0033872.1 245 504 +
Chr2	gffcl	locus	31547294	31548254	.	+	.	ID=RLOC_00016064;geneIDs=comp143038_c0_seq1.path1;transcripts=comp143038_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31547294	31548254	.	+	.	ID=comp143038_c0_seq1.mrna1;geneID=comp143038_c0_seq1.path1;Name=comp143038_c0_seq1;Dir=indeterminatecoverage=98.7;identity=99.6;matches=958;mismatches=1;indels=3;unknowns=0;Target=comp143038_c0_seq1 973 14 .;CDS_Target=comp143038_c0_seq1 854 747 .;locus=RLOC_00016064
Chr2	stalkie_big_nohaplotig	exon	31547294	31548254	99	+	.	Parent=comp143038_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31548028	31548135	.	+	0	Parent=comp143038_c0_seq1.mrna1
Chr2	gffcl	locus	31549143	31549363	.	+	.	ID=RLOC_00016065;geneIDs=comp142321_c1_seq1.path1;transcripts=comp142321_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31549143	31549363	.	+	.	ID=comp142321_c1_seq1.mrna1;geneID=comp142321_c1_seq1.path1;Name=comp142321_c1_seq1;Dir=indeterminatecoverage=93.6;identity=98.6;matches=218;mismatches=0;indels=3;unknowns=0;Target=comp142321_c1_seq1 233 16 .;CDS_Target=comp142321_c1_seq1 123 16 .;locus=RLOC_00016065
Chr2	stalkie_big_nohaplotig	exon	31549143	31549363	98	+	.	Parent=comp142321_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31549143	31549253	.	+	0	Parent=comp142321_c1_seq1.mrna1
Chr2	gffcl	locus	31549816	31550888	.	.	.	ID=RLOC_00016066;geneIDs=comp49187_c0_seq1.path1,comp118673_c0_seq1.path1,comp146240_c0_seq1.path1;transcripts=comp118673_c0_seq1.mrna1,comp146240_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31549816	31550080	.	+	.	ID=comp118673_c0_seq1.mrna1;geneID=comp118673_c0_seq1.path1;Name=comp118673_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=262;mismatches=3;indels=1;unknowns=0;Target=comp118673_c0_seq1 266 1 .;CDS_Target=comp118673_c0_seq1 238 95 .;locus=RLOC_00016066
Chr2	stalkie_big_nohaplotig	exon	31549816	31550080	98	+	.	Parent=comp118673_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31549909	31550052	.	+	0	Parent=comp118673_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31550230	31550888	.	+	.	ID=comp146240_c0_seq1.mrna1;geneID=comp146240_c0_seq1.path1;Name=comp146240_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.0;matches=646;mismatches=1;indels=12;unknowns=0;Target=comp146240_c0_seq1 647 1 .;CDS_Target=comp146240_c0_seq1 645 526 .;locus=RLOC_00016066
Chr2	stalkie_big_nohaplotig	exon	31550230	31550888	98	+	.	Parent=comp146240_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31550755	31550886	.	+	0	Parent=comp146240_c0_seq1.mrna1
Chr2	gffcl	locus	31551199	31552176	.	+	.	ID=RLOC_00016067;geneIDs=comp135678_c0_seq1.path1;transcripts=comp135678_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31551199	31552176	.	+	.	ID=comp135678_c0_seq1.mrna1;geneID=comp135678_c0_seq1.path1;Name=comp135678_c0_seq1;Dir=indeterminatecoverage=99.3;identity=98.7;matches=970;mismatches=8;indels=5;unknowns=0;Target=comp135678_c0_seq1 990 8 .;CDS_Target=comp135678_c0_seq1 349 311 .;locus=RLOC_00016067
Chr2	stalkie_big_nohaplotig	exon	31551199	31552176	98	+	.	Parent=comp135678_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31551497	31551535	.	+	0	Parent=comp135678_c0_seq1.mrna1
Chr2	gffcl	locus	31554306	31557395	.	-	.	ID=RLOC_00016068;geneIDs=FBgn0033873.3.path1;transcripts=FBgn0033873.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31554306	31557395	.	-	.	ID=FBgn0033873.3.mrna1;geneID=FBgn0033873.3.path1;Name=FBgn0033873.3;Dir=sensecoverage=100.0;identity=99.9;matches=1049;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016068
Chr2	stalkie_big_nohaplotig	exon	31554306	31555205	99	-	.	Parent=FBgn0033873.3.mrna1;Target=FBgn0033873.3 151 1050 +
Chr2	stalkie_big_nohaplotig	exon	31557246	31557395	100	-	.	Parent=FBgn0033873.3.mrna1;Target=FBgn0033873.3 1 150 +
Chr2	stalkie_big_nohaplotig	CDS	31554306	31555205	.	-	0	Parent=FBgn0033873.3.mrna1;Target=FBgn0033873.3 151 1050 +
Chr2	stalkie_big_nohaplotig	CDS	31557246	31557395	.	-	0	Parent=FBgn0033873.3.mrna1;Target=FBgn0033873.3 1 150 +
Chr2	gffcl	locus	31569779	31570879	.	+	.	ID=RLOC_00016069;geneIDs=FBgn0033874.1.path1;transcripts=FBgn0033874.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31569779	31570879	.	+	.	ID=FBgn0033874.1.mrna1;geneID=FBgn0033874.1.path1;Name=FBgn0033874.1;Dir=sensecoverage=100.0;identity=99.8;matches=1042;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016069
Chr2	stalkie_big_nohaplotig	exon	31569779	31570113	100	+	.	Parent=FBgn0033874.1.mrna1;Target=FBgn0033874.1 1 335 +
Chr2	stalkie_big_nohaplotig	exon	31570171	31570879	99	+	.	Parent=FBgn0033874.1.mrna1;Target=FBgn0033874.1 336 1044 +
Chr2	stalkie_big_nohaplotig	CDS	31569779	31570113	.	+	0	Parent=FBgn0033874.1.mrna1;Target=FBgn0033874.1 1 335 +
Chr2	stalkie_big_nohaplotig	CDS	31570171	31570879	.	+	1	Parent=FBgn0033874.1.mrna1;Target=FBgn0033874.1 336 1044 +
Chr2	gffcl	locus	31573132	31574610	.	.	.	ID=RLOC_00016070;geneIDs=comp58029_c0_seq1.path1,comp156182_c0_seq1.path1;transcripts=comp58029_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31573132	31574058	.	+	.	ID=comp58029_c0_seq1.mrna1;geneID=comp58029_c0_seq1.path1;Name=comp58029_c0_seq1;Dir=sensecoverage=97.1;identity=99.6;matches=692;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016070
Chr2	stalkie_big_nohaplotig	exon	31573132	31573339	99	+	.	Parent=comp58029_c0_seq1.mrna1;Target=comp58029_c0_seq1 1 208 +
Chr2	stalkie_big_nohaplotig	exon	31573572	31574058	99	+	.	Parent=comp58029_c0_seq1.mrna1;Target=comp58029_c0_seq1 209 695 +
Chr2	stalkie_big_nohaplotig	CDS	31573133	31573339	.	+	0	Parent=comp58029_c0_seq1.mrna1;Target=comp58029_c0_seq1 2 208 +
Chr2	stalkie_big_nohaplotig	CDS	31573572	31573769	.	+	0	Parent=comp58029_c0_seq1.mrna1;Target=comp58029_c0_seq1 209 406 +
Chr2	gffcl	locus	31580959	31598151	.	.	.	ID=RLOC_00016071;geneIDs=FBgn0033876.1.path1,comp348134_c0_seq1.path1;transcripts=FBgn0033876.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31580959	31597846	.	-	.	ID=FBgn0033876.1.mrna1;geneID=FBgn0033876.1.path1;Name=FBgn0033876.1;Dir=sensecoverage=97.7;identity=99.7;matches=778;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016071
Chr2	stalkie_big_nohaplotig	exon	31580959	31580999	100	-	.	Parent=FBgn0033876.1.mrna1;Target=FBgn0033876.1 758 798 +
Chr2	stalkie_big_nohaplotig	exon	31582803	31582974	100	-	.	Parent=FBgn0033876.1.mrna1;Target=FBgn0033876.1 586 757 +
Chr2	stalkie_big_nohaplotig	exon	31583055	31583194	99	-	.	Parent=FBgn0033876.1.mrna1;Target=FBgn0033876.1 446 585 +
Chr2	stalkie_big_nohaplotig	exon	31583320	31583551	100	-	.	Parent=FBgn0033876.1.mrna1;Target=FBgn0033876.1 214 445 +
Chr2	stalkie_big_nohaplotig	exon	31597652	31597846	99	-	.	Parent=FBgn0033876.1.mrna1;Target=FBgn0033876.1 19 213 +
Chr2	stalkie_big_nohaplotig	CDS	31580959	31580999	.	-	2	Parent=FBgn0033876.1.mrna1;Target=FBgn0033876.1 758 798 +
Chr2	stalkie_big_nohaplotig	CDS	31582803	31582974	.	-	0	Parent=FBgn0033876.1.mrna1;Target=FBgn0033876.1 586 757 +
Chr2	stalkie_big_nohaplotig	CDS	31583055	31583194	.	-	2	Parent=FBgn0033876.1.mrna1;Target=FBgn0033876.1 446 585 +
Chr2	stalkie_big_nohaplotig	CDS	31583320	31583551	.	-	0	Parent=FBgn0033876.1.mrna1;Target=FBgn0033876.1 214 445 +
Chr2	stalkie_big_nohaplotig	CDS	31597652	31597846	.	-	0	Parent=FBgn0033876.1.mrna1;Target=FBgn0033876.1 19 213 +
Chr2	gffcl	locus	31601467	31603019	.	-	.	ID=RLOC_00016072;geneIDs=FBgn0033879.1.path1;transcripts=FBgn0033879.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31601467	31603019	.	-	.	ID=FBgn0033879.1.mrna1;geneID=FBgn0033879.1.path1;Name=FBgn0033879.1;Dir=sensecoverage=100.0;identity=99.0;matches=882;mismatches=9;indels=0;unknowns=0;locus=RLOC_00016072
Chr2	stalkie_big_nohaplotig	exon	31601467	31601529	100	-	.	Parent=FBgn0033879.1.mrna1;Target=FBgn0033879.1 829 891 +
Chr2	stalkie_big_nohaplotig	exon	31601623	31602341	98	-	.	Parent=FBgn0033879.1.mrna1;Target=FBgn0033879.1 110 828 +
Chr2	stalkie_big_nohaplotig	exon	31602911	31603019	99	-	.	Parent=FBgn0033879.1.mrna1;Target=FBgn0033879.1 1 109 +
Chr2	stalkie_big_nohaplotig	CDS	31601467	31601529	.	-	0	Parent=FBgn0033879.1.mrna1;Target=FBgn0033879.1 829 891 +
Chr2	stalkie_big_nohaplotig	CDS	31601623	31602341	.	-	2	Parent=FBgn0033879.1.mrna1;Target=FBgn0033879.1 110 828 +
Chr2	stalkie_big_nohaplotig	CDS	31602911	31603019	.	-	0	Parent=FBgn0033879.1.mrna1;Target=FBgn0033879.1 1 109 +
Chr2	gffcl	locus	31606804	31608935	.	-	.	ID=RLOC_00016073;geneIDs=FBgn0086356.1.path1;transcripts=FBgn0086356.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31606804	31608935	.	-	.	ID=FBgn0086356.1.mrna1;geneID=FBgn0086356.1.path1;Name=FBgn0086356.1;Dir=sensecoverage=100.0;identity=99.3;matches=1883;mismatches=13;indels=0;unknowns=0;locus=RLOC_00016073
Chr2	stalkie_big_nohaplotig	exon	31606804	31606871	98	-	.	Parent=FBgn0086356.1.mrna1;Target=FBgn0086356.1 1829 1896 +
Chr2	stalkie_big_nohaplotig	exon	31606933	31607729	99	-	.	Parent=FBgn0086356.1.mrna1;Target=FBgn0086356.1 1032 1828 +
Chr2	stalkie_big_nohaplotig	exon	31607792	31608525	99	-	.	Parent=FBgn0086356.1.mrna1;Target=FBgn0086356.1 298 1031 +
Chr2	stalkie_big_nohaplotig	exon	31608583	31608785	98	-	.	Parent=FBgn0086356.1.mrna1;Target=FBgn0086356.1 95 297 +
Chr2	stalkie_big_nohaplotig	exon	31608842	31608935	100	-	.	Parent=FBgn0086356.1.mrna1;Target=FBgn0086356.1 1 94 +
Chr2	stalkie_big_nohaplotig	CDS	31606804	31606871	.	-	2	Parent=FBgn0086356.1.mrna1;Target=FBgn0086356.1 1829 1896 +
Chr2	stalkie_big_nohaplotig	CDS	31606933	31607729	.	-	1	Parent=FBgn0086356.1.mrna1;Target=FBgn0086356.1 1032 1828 +
Chr2	stalkie_big_nohaplotig	CDS	31607792	31608525	.	-	0	Parent=FBgn0086356.1.mrna1;Target=FBgn0086356.1 298 1031 +
Chr2	stalkie_big_nohaplotig	CDS	31608583	31608785	.	-	2	Parent=FBgn0086356.1.mrna1;Target=FBgn0086356.1 95 297 +
Chr2	stalkie_big_nohaplotig	CDS	31608842	31608935	.	-	0	Parent=FBgn0086356.1.mrna1;Target=FBgn0086356.1 1 94 +
Chr2	gffcl	locus	31613331	31614545	.	+	.	ID=RLOC_00016075;geneIDs=FBgn0033883.1.path1;transcripts=FBgn0033883.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31613331	31614545	.	+	.	ID=FBgn0033883.1.mrna1;geneID=FBgn0033883.1.path1;Name=FBgn0033883.1;Dir=sensecoverage=100.0;identity=99.0;matches=1146;mismatches=12;indels=0;unknowns=0;locus=RLOC_00016075
Chr2	stalkie_big_nohaplotig	exon	31613331	31613628	99	+	.	Parent=FBgn0033883.1.mrna1;Target=FBgn0033883.1 1 298 +
Chr2	stalkie_big_nohaplotig	exon	31613686	31614545	98	+	.	Parent=FBgn0033883.1.mrna1;Target=FBgn0033883.1 299 1158 +
Chr2	stalkie_big_nohaplotig	CDS	31613331	31613628	.	+	0	Parent=FBgn0033883.1.mrna1;Target=FBgn0033883.1 1 298 +
Chr2	stalkie_big_nohaplotig	CDS	31613686	31614545	.	+	2	Parent=FBgn0033883.1.mrna1;Target=FBgn0033883.1 299 1158 +
Chr2	gffcl	locus	31620918	31624700	.	+	.	ID=RLOC_00016076;geneIDs=FBgn0033685.1.path1;transcripts=FBgn0033685.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31620918	31624700	.	+	.	ID=FBgn0033685.1.mrna1;geneID=FBgn0033685.1.path1;Name=FBgn0033685.1;Dir=sensecoverage=100.0;identity=99.6;matches=1112;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016076
Chr2	stalkie_big_nohaplotig	exon	31620918	31621092	98	+	.	Parent=FBgn0033685.1.mrna1;Target=FBgn0033685.1 1 175 +
Chr2	stalkie_big_nohaplotig	exon	31623760	31624700	99	+	.	Parent=FBgn0033685.1.mrna1;Target=FBgn0033685.1 176 1116 +
Chr2	stalkie_big_nohaplotig	CDS	31620918	31621092	.	+	0	Parent=FBgn0033685.1.mrna1;Target=FBgn0033685.1 1 175 +
Chr2	stalkie_big_nohaplotig	CDS	31623760	31624700	.	+	2	Parent=FBgn0033685.1.mrna1;Target=FBgn0033685.1 176 1116 +
Chr2	gffcl	locus	31629337	31630811	.	-	.	ID=RLOC_00016077;geneIDs=FBgn0027495.1.path1;transcripts=FBgn0027495.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31629337	31630811	.	-	.	ID=FBgn0027495.1.mrna1;geneID=FBgn0027495.1.path1;Name=FBgn0027495.1;Dir=sensecoverage=75.4;identity=100.0;matches=1362;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016077
Chr2	stalkie_big_nohaplotig	exon	31629337	31630350	100	-	.	Parent=FBgn0027495.1.mrna1;Target=FBgn0027495.1 349 1362 +
Chr2	stalkie_big_nohaplotig	exon	31630464	31630811	100	-	.	Parent=FBgn0027495.1.mrna1;Target=FBgn0027495.1 1 348 +
Chr2	stalkie_big_nohaplotig	CDS	31629337	31630350	.	-	0	Parent=FBgn0027495.1.mrna1;Target=FBgn0027495.1 349 1362 +
Chr2	stalkie_big_nohaplotig	CDS	31630464	31630811	.	-	0	Parent=FBgn0027495.1.mrna1;Target=FBgn0027495.1 1 348 +
Chr2	gffcl	locus	31692471	31693577	.	-	.	ID=RLOC_00016078;geneIDs=ORF1546.path1;transcripts=ORF1546.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31692471	31693577	.	-	.	ID=ORF1546.mrna1;geneID=ORF1546.path1;Name=ORF1546;Dir=sensecoverage=100.0;identity=93.8;matches=999;mismatches=3;indels=63;unknowns=0;locus=RLOC_00016078
Chr2	stalkie_big_nohaplotig	exon	31692471	31693108	90	-	.	Parent=ORF1546.mrna1;Target=ORF1546 365 1065 +
Chr2	stalkie_big_nohaplotig	exon	31693214	31693577	100	-	.	Parent=ORF1546.mrna1;Target=ORF1546 1 364 +
Chr2	stalkie_big_nohaplotig	CDS	31692471	31693108	.	-	2	Parent=ORF1546.mrna1;Target=ORF1546 365 1065 +
Chr2	stalkie_big_nohaplotig	CDS	31693214	31693577	.	-	0	Parent=ORF1546.mrna1;Target=ORF1546 1 364 +
Chr2	gffcl	locus	31728733	31963044	.	+	.	ID=RLOC_00016079;geneIDs=comp146316_c0_seq1.path1;transcripts=comp146316_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31728733	31963044	.	+	.	ID=comp146316_c0_seq1.mrna1;geneID=comp146316_c0_seq1.path1;Name=comp146316_c0_seq1;Dir=indeterminatecoverage=97.8;identity=87.4;matches=484;mismatches=18;indels=52;unknowns=0;locus=RLOC_00016079
Chr2	stalkie_big_nohaplotig	exon	31728733	31728748	100	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 28 13 .
Chr2	stalkie_big_nohaplotig	exon	31736665	31736668	100	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 32 29 .
Chr2	stalkie_big_nohaplotig	exon	31759923	31759964	54	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 65 33 .
Chr2	stalkie_big_nohaplotig	exon	31762752	31762758	100	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 72 66 .
Chr2	stalkie_big_nohaplotig	exon	31767721	31767724	100	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 76 73 .
Chr2	stalkie_big_nohaplotig	exon	31771505	31771513	100	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 85 77 .
Chr2	stalkie_big_nohaplotig	exon	31781852	31781857	100	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 91 86 .
Chr2	stalkie_big_nohaplotig	exon	31794051	31794059	100	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 100 92 .
Chr2	stalkie_big_nohaplotig	exon	31799912	31799919	100	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 108 101 .
Chr2	stalkie_big_nohaplotig	exon	31821976	31822000	32	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 175 109 .
Chr2	stalkie_big_nohaplotig	exon	31822783	31822790	100	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 183 176 .
Chr2	stalkie_big_nohaplotig	exon	31825011	31825014	100	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 187 184 .
Chr2	stalkie_big_nohaplotig	exon	31832921	31832924	100	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 191 188 .
Chr2	stalkie_big_nohaplotig	exon	31838224	31838228	100	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 196 192 .
Chr2	stalkie_big_nohaplotig	exon	31843380	31843381	100	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 198 197 .
Chr2	stalkie_big_nohaplotig	exon	31855480	31855485	100	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 204 199 .
Chr2	stalkie_big_nohaplotig	exon	31857147	31857153	100	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 212 206 .
Chr2	stalkie_big_nohaplotig	exon	31861254	31861255	100	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 214 213 .
Chr2	stalkie_big_nohaplotig	exon	31865331	31865332	100	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 216 215 .
Chr2	stalkie_big_nohaplotig	exon	31866611	31866616	100	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 222 217 .
Chr2	stalkie_big_nohaplotig	exon	31895261	31895266	100	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 228 223 .
Chr2	stalkie_big_nohaplotig	exon	31919171	31919178	100	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 236 229 .
Chr2	stalkie_big_nohaplotig	exon	31962724	31963044	98	+	.	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 558 237 .
Chr2	stalkie_big_nohaplotig	CDS	31728733	31728748	.	+	0	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 28 13 .
Chr2	stalkie_big_nohaplotig	CDS	31736665	31736668	.	+	2	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 32 29 .
Chr2	stalkie_big_nohaplotig	CDS	31759923	31759964	.	+	1	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 65 33 .
Chr2	stalkie_big_nohaplotig	CDS	31762752	31762758	.	+	1	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 72 66 .
Chr2	stalkie_big_nohaplotig	CDS	31767721	31767724	.	+	0	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 76 73 .
Chr2	stalkie_big_nohaplotig	CDS	31771505	31771513	.	+	2	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 85 77 .
Chr2	stalkie_big_nohaplotig	CDS	31781852	31781857	.	+	2	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 91 86 .
Chr2	stalkie_big_nohaplotig	CDS	31794051	31794059	.	+	2	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 100 92 .
Chr2	stalkie_big_nohaplotig	CDS	31799912	31799919	.	+	2	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 108 101 .
Chr2	stalkie_big_nohaplotig	CDS	31821976	31821982	.	+	0	Parent=comp146316_c0_seq1.mrna1;Target=comp146316_c0_seq1 126 109 .
Chr2	gffcl	locus	31771114	31886973	.	-	.	ID=RLOC_00016080;geneIDs=comp156958_c0_seq1.path1;transcripts=comp156958_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31771114	31886973	.	-	.	ID=comp156958_c0_seq1.mrna1;geneID=comp156958_c0_seq1.path1;Name=comp156958_c0_seq1;Dir=indeterminatecoverage=34.3;identity=99.8;matches=466;mismatches=0;indels=1;unknowns=0;Target=comp156958_c0_seq1 1880 1761 .;locus=RLOC_00016080
Chr2	stalkie_big_nohaplotig	exon	31771114	31771521	99	-	.	Parent=comp156958_c0_seq1.mrna1;Target=comp156958_c0_seq1 1888 1480 .
Chr2	stalkie_big_nohaplotig	exon	31773065	31773069	100	-	.	Parent=comp156958_c0_seq1.mrna1;Target=comp156958_c0_seq1 1479 1475 .
Chr2	stalkie_big_nohaplotig	exon	31783352	31783355	100	-	.	Parent=comp156958_c0_seq1.mrna1;Target=comp156958_c0_seq1 1474 1471 .
Chr2	stalkie_big_nohaplotig	exon	31807252	31807260	100	-	.	Parent=comp156958_c0_seq1.mrna1;Target=comp156958_c0_seq1 1470 1462 .
Chr2	stalkie_big_nohaplotig	exon	31839813	31839822	100	-	.	Parent=comp156958_c0_seq1.mrna1;Target=comp156958_c0_seq1 1424 1415 .
Chr2	stalkie_big_nohaplotig	exon	31855641	31855651	100	-	.	Parent=comp156958_c0_seq1.mrna1;Target=comp156958_c0_seq1 1335 1325 .
Chr2	stalkie_big_nohaplotig	exon	31866245	31866249	100	-	.	Parent=comp156958_c0_seq1.mrna1;Target=comp156958_c0_seq1 1324 1320 .
Chr2	stalkie_big_nohaplotig	exon	31885360	31885362	100	-	.	Parent=comp156958_c0_seq1.mrna1;Target=comp156958_c0_seq1 1251 1249 .
Chr2	stalkie_big_nohaplotig	exon	31886966	31886973	100	-	.	Parent=comp156958_c0_seq1.mrna1;Target=comp156958_c0_seq1 1248 1241 .
Chr2	stalkie_big_nohaplotig	CDS	31771122	31771241	.	-	0	Parent=comp156958_c0_seq1.mrna1
Chr2	gffcl	locus	31844583	31845960	.	+	.	ID=RLOC_00016081;geneIDs=comp151849_c0_seq1.path1;transcripts=comp151849_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31844583	31845960	.	+	.	ID=comp151849_c0_seq1.mrna1;geneID=comp151849_c0_seq1.path1;Name=comp151849_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=1299;mismatches=14;indels=1;unknowns=0;Target=comp151849_c0_seq1 252 428 .;locus=RLOC_00016081
Chr2	stalkie_big_nohaplotig	exon	31844583	31844844	98	+	.	Parent=comp151849_c0_seq1.mrna1;Target=comp151849_c0_seq1 1053 1314 -
Chr2	stalkie_big_nohaplotig	exon	31844910	31845960	99	+	.	Parent=comp151849_c0_seq1.mrna1;Target=comp151849_c0_seq1 1 1052 -
Chr2	stalkie_big_nohaplotig	CDS	31845533	31845709	.	+	0	Parent=comp151849_c0_seq1.mrna1
Chr2	gffcl	locus	31882532	31883164	.	+	.	ID=RLOC_00016082;geneIDs=comp1242209_c0_seq1.path2;transcripts=comp1242209_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	31882532	31883164	.	+	.	ID=comp1242209_c0_seq1.mrna2;geneID=comp1242209_c0_seq1.path2;Name=comp1242209_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=631;mismatches=2;indels=0;unknowns=0;Target=comp1242209_c0_seq1 633 1 .;CDS_Target=comp1242209_c0_seq1 175 71 .;locus=RLOC_00016082
Chr2	stalkie_big_nohaplotig	exon	31882532	31883164	99	+	.	Parent=comp1242209_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	31882602	31882706	.	+	0	Parent=comp1242209_c0_seq1.mrna2
Chr2	gffcl	locus	31892256	31956332	.	+	.	ID=RLOC_00016083;geneIDs=FBgn0024732.1.path1;transcripts=FBgn0024732.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31892256	31956332	.	+	.	ID=FBgn0024732.1.mrna1;geneID=FBgn0024732.1.path1;Name=FBgn0024732.1;Dir=sensecoverage=100.0;identity=99.1;matches=847;mismatches=8;indels=0;unknowns=0;locus=RLOC_00016083
Chr2	stalkie_big_nohaplotig	exon	31892256	31892342	98	+	.	Parent=FBgn0024732.1.mrna1;Target=FBgn0024732.1 1 87 +
Chr2	stalkie_big_nohaplotig	exon	31933697	31933909	97	+	.	Parent=FBgn0024732.1.mrna1;Target=FBgn0024732.1 88 300 +
Chr2	stalkie_big_nohaplotig	exon	31949171	31949397	100	+	.	Parent=FBgn0024732.1.mrna1;Target=FBgn0024732.1 301 527 +
Chr2	stalkie_big_nohaplotig	exon	31956005	31956332	99	+	.	Parent=FBgn0024732.1.mrna1;Target=FBgn0024732.1 528 855 +
Chr2	stalkie_big_nohaplotig	CDS	31892256	31892342	.	+	0	Parent=FBgn0024732.1.mrna1;Target=FBgn0024732.1 1 87 +
Chr2	stalkie_big_nohaplotig	CDS	31933697	31933909	.	+	0	Parent=FBgn0024732.1.mrna1;Target=FBgn0024732.1 88 300 +
Chr2	stalkie_big_nohaplotig	CDS	31949171	31949397	.	+	0	Parent=FBgn0024732.1.mrna1;Target=FBgn0024732.1 301 527 +
Chr2	stalkie_big_nohaplotig	CDS	31956005	31956332	.	+	1	Parent=FBgn0024732.1.mrna1;Target=FBgn0024732.1 528 855 +
Chr2	gffcl	locus	31959225	31960293	.	-	.	ID=RLOC_00016084;geneIDs=comp159936_c0_seq1.path1;transcripts=comp159936_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31959225	31960293	.	-	.	ID=comp159936_c0_seq1.mrna1;geneID=comp159936_c0_seq1.path1;Name=comp159936_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1060;mismatches=9;indels=0;unknowns=0;Target=comp159936_c0_seq1 1069 1 .;CDS_Target=comp159936_c0_seq1 670 482 .;locus=RLOC_00016084
Chr2	stalkie_big_nohaplotig	exon	31959225	31960293	99	-	.	Parent=comp159936_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31959624	31959812	.	-	0	Parent=comp159936_c0_seq1.mrna1
Chr2	gffcl	locus	31960511	31961266	.	+	.	ID=RLOC_00016085;geneIDs=comp150714_c0_seq1.path1;transcripts=comp150714_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31960511	31961266	.	+	.	ID=comp150714_c0_seq1.mrna1;geneID=comp150714_c0_seq1.path1;Name=comp150714_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.8;matches=724;mismatches=31;indels=1;unknowns=0;Target=comp150714_c0_seq1 755 1 .;CDS_Target=comp150714_c0_seq1 368 195 .;locus=RLOC_00016085
Chr2	stalkie_big_nohaplotig	exon	31960511	31961266	95	+	.	Parent=comp150714_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31960705	31960879	.	+	0	Parent=comp150714_c0_seq1.mrna1
Chr2	gffcl	locus	31963142	31963523	.	-	.	ID=RLOC_00016086;geneIDs=comp103427_c0_seq1.path1;transcripts=comp103427_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31963142	31963523	.	-	.	ID=comp103427_c0_seq1.mrna1;geneID=comp103427_c0_seq1.path1;Name=comp103427_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=381;mismatches=1;indels=0;unknowns=0;Target=comp103427_c0_seq1 382 1 .;CDS_Target=comp103427_c0_seq1 180 1 .;locus=RLOC_00016086
Chr2	stalkie_big_nohaplotig	exon	31963142	31963523	99	-	.	Parent=comp103427_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31963344	31963523	.	-	0	Parent=comp103427_c0_seq1.mrna1
Chr2	gffcl	locus	31992124	31993693	.	-	.	ID=RLOC_00016087;geneIDs=comp135935_c0_seq1.path1;transcripts=comp135935_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	31992124	31993693	.	-	.	ID=comp135935_c0_seq1.mrna1;geneID=comp135935_c0_seq1.path1;Name=comp135935_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=1570;mismatches=0;indels=0;unknowns=0;Target=comp135935_c0_seq1 1570 1 .;CDS_Target=comp135935_c0_seq1 595 449 .;locus=RLOC_00016087
Chr2	stalkie_big_nohaplotig	exon	31992124	31993693	100	-	.	Parent=comp135935_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	31993099	31993245	.	-	0	Parent=comp135935_c0_seq1.mrna1
Chr2	gffcl	locus	32003687	32012582	.	+	.	ID=RLOC_00016088;geneIDs=FBgn0263864.1.path2;transcripts=FBgn0263864.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	32003687	32012582	.	+	.	ID=FBgn0263864.1.mrna2;geneID=FBgn0263864.1.path2;Name=FBgn0263864.1;Dir=sensecoverage=100.0;identity=99.4;matches=2620;mismatches=16;indels=1;unknowns=0;Target=FBgn0263864.1 3 56 +;locus=RLOC_00016088
Chr2	stalkie_big_nohaplotig	exon	32003687	32003867	98	+	.	Parent=FBgn0263864.1.mrna2;Target=FBgn0263864.1 1 182 +
Chr2	stalkie_big_nohaplotig	exon	32003931	32004249	100	+	.	Parent=FBgn0263864.1.mrna2;Target=FBgn0263864.1 183 501 +
Chr2	stalkie_big_nohaplotig	exon	32004321	32005283	99	+	.	Parent=FBgn0263864.1.mrna2;Target=FBgn0263864.1 502 1464 +
Chr2	stalkie_big_nohaplotig	exon	32006767	32007120	98	+	.	Parent=FBgn0263864.1.mrna2;Target=FBgn0263864.1 1465 1818 +
Chr2	stalkie_big_nohaplotig	exon	32007181	32007333	99	+	.	Parent=FBgn0263864.1.mrna2;Target=FBgn0263864.1 1819 1971 +
Chr2	stalkie_big_nohaplotig	exon	32011849	32012001	100	+	.	Parent=FBgn0263864.1.mrna2;Target=FBgn0263864.1 1972 2124 +
Chr2	stalkie_big_nohaplotig	exon	32012070	32012582	99	+	.	Parent=FBgn0263864.1.mrna2;Target=FBgn0263864.1 2125 2637 +
Chr2	stalkie_big_nohaplotig	CDS	32003689	32003741	.	+	0	Parent=FBgn0263864.1.mrna2
Chr2	gffcl	locus	32013044	32014048	.	-	.	ID=RLOC_00016089;geneIDs=comp152906_c0_seq1.path1;transcripts=comp152906_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32013044	32014048	.	-	.	ID=comp152906_c0_seq1.mrna1;geneID=comp152906_c0_seq1.path1;Name=comp152906_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.7;matches=1002;mismatches=3;indels=0;unknowns=0;Target=comp152906_c0_seq1 1005 1 .;CDS_Target=comp152906_c0_seq1 156 1 .;locus=RLOC_00016089
Chr2	stalkie_big_nohaplotig	exon	32013044	32014048	99	-	.	Parent=comp152906_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	32013893	32014048	.	-	0	Parent=comp152906_c0_seq1.mrna1
Chr2	gffcl	locus	32015155	32015643	.	-	.	ID=RLOC_00016090;geneIDs=comp151914_c0_seq1.path1;transcripts=comp151914_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32015155	32015643	.	-	.	ID=comp151914_c0_seq1.mrna1;geneID=comp151914_c0_seq1.path1;Name=comp151914_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=485;mismatches=4;indels=0;unknowns=0;Target=comp151914_c0_seq1 489 1 .;CDS_Target=comp151914_c0_seq1 215 120 .;locus=RLOC_00016090
Chr2	stalkie_big_nohaplotig	exon	32015155	32015643	99	-	.	Parent=comp151914_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	32015429	32015524	.	-	0	Parent=comp151914_c0_seq1.mrna1
Chr2	gffcl	locus	32047179	32048288	.	-	.	ID=RLOC_00016091;geneIDs=FBgn0033351.1.path1;transcripts=FBgn0033351.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32047179	32048288	.	-	.	ID=FBgn0033351.1.mrna1;geneID=FBgn0033351.1.path1;Name=FBgn0033351.1;Dir=sensecoverage=99.8;identity=98.5;matches=1038;mismatches=16;indels=0;unknowns=0;locus=RLOC_00016091
Chr2	stalkie_big_nohaplotig	exon	32047179	32048009	98	-	.	Parent=FBgn0033351.1.mrna1;Target=FBgn0033351.1 226 1056 +
Chr2	stalkie_big_nohaplotig	exon	32048066	32048288	98	-	.	Parent=FBgn0033351.1.mrna1;Target=FBgn0033351.1 3 225 +
Chr2	stalkie_big_nohaplotig	CDS	32047179	32048009	.	-	0	Parent=FBgn0033351.1.mrna1;Target=FBgn0033351.1 226 1056 +
Chr2	stalkie_big_nohaplotig	CDS	32048066	32048287	.	-	0	Parent=FBgn0033351.1.mrna1;Target=FBgn0033351.1 4 225 +
Chr2	gffcl	locus	32048566	32053130	.	+	.	ID=RLOC_00016092;geneIDs=FBgn0004921.1.path1;transcripts=FBgn0004921.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32048566	32053130	.	+	.	ID=FBgn0004921.1.mrna1;geneID=FBgn0004921.1.path1;Name=FBgn0004921.1;Dir=sensecoverage=100.0;identity=99.6;matches=245;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016092
Chr2	stalkie_big_nohaplotig	exon	32048566	32048581	100	+	.	Parent=FBgn0004921.1.mrna1;Target=FBgn0004921.1 1 16 +
Chr2	stalkie_big_nohaplotig	exon	32052901	32053130	99	+	.	Parent=FBgn0004921.1.mrna1;Target=FBgn0004921.1 17 246 +
Chr2	stalkie_big_nohaplotig	CDS	32048566	32048581	.	+	0	Parent=FBgn0004921.1.mrna1;Target=FBgn0004921.1 1 16 +
Chr2	stalkie_big_nohaplotig	CDS	32052901	32053130	.	+	2	Parent=FBgn0004921.1.mrna1;Target=FBgn0004921.1 17 246 +
Chr2	gffcl	locus	32050763	32052478	.	-	.	ID=RLOC_00016093;geneIDs=comp161050_c1_seq1.path1;transcripts=comp161050_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32050763	32052478	.	-	.	ID=comp161050_c1_seq1.mrna1;geneID=comp161050_c1_seq1.path1;Name=comp161050_c1_seq1;Dir=indeterminatecoverage=92.2;identity=97.7;matches=1504;mismatches=25;indels=11;unknowns=0;Target=comp161050_c1_seq1 1321 1085 .;locus=RLOC_00016093
Chr2	stalkie_big_nohaplotig	exon	32050763	32051672	98	-	.	Parent=comp161050_c1_seq1.mrna1;Target=comp161050_c1_seq1 1540 631 .
Chr2	stalkie_big_nohaplotig	exon	32051860	32052478	97	-	.	Parent=comp161050_c1_seq1.mrna1;Target=comp161050_c1_seq1 630 1 .
Chr2	stalkie_big_nohaplotig	CDS	32050982	32051218	.	-	0	Parent=comp161050_c1_seq1.mrna1
Chr2	gffcl	locus	32057507	32059763	.	+	.	ID=RLOC_00016094;geneIDs=comp161567_c0_seq1.path1;transcripts=comp161567_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32057507	32059763	.	+	.	ID=comp161567_c0_seq1.mrna1;geneID=comp161567_c0_seq1.path1;Name=comp161567_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.2;matches=2217;mismatches=38;indels=2;unknowns=0;Target=comp161567_c0_seq1 2257 3 .;CDS_Target=comp161567_c0_seq1 11 3 .;locus=RLOC_00016094
Chr2	stalkie_big_nohaplotig	exon	32057507	32059763	98	+	.	Parent=comp161567_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	32057507	32057515	.	+	0	Parent=comp161567_c0_seq1.mrna1
Chr2	gffcl	locus	32061517	32062565	.	-	.	ID=RLOC_00016095;geneIDs=comp148738_c0_seq1.path1;transcripts=comp148738_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32061517	32062565	.	-	.	ID=comp148738_c0_seq1.mrna1;geneID=comp148738_c0_seq1.path1;Name=comp148738_c0_seq1;Dir=sensecoverage=99.8;identity=97.8;matches=831;mismatches=10;indels=9;unknowns=0;locus=RLOC_00016095
Chr2	stalkie_big_nohaplotig	exon	32061517	32061918	99	-	.	Parent=comp148738_c0_seq1.mrna1;Target=comp148738_c0_seq1 440 841 +
Chr2	stalkie_big_nohaplotig	exon	32061973	32062039	98	-	.	Parent=comp148738_c0_seq1.mrna1;Target=comp148738_c0_seq1 373 439 +
Chr2	stalkie_big_nohaplotig	exon	32062185	32062565	95	-	.	Parent=comp148738_c0_seq1.mrna1;Target=comp148738_c0_seq1 1 372 +
Chr2	stalkie_big_nohaplotig	CDS	32061631	32061918	.	-	0	Parent=comp148738_c0_seq1.mrna1;Target=comp148738_c0_seq1 440 727 +
Chr2	stalkie_big_nohaplotig	CDS	32061973	32061975	.	-	0	Parent=comp148738_c0_seq1.mrna1;Target=comp148738_c0_seq1 437 439 +
Chr2	gffcl	locus	32065275	32067205	.	-	.	ID=RLOC_00016096;geneIDs=FBgn0033342.1.path1;transcripts=FBgn0033342.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32065275	32067205	.	-	.	ID=FBgn0033342.1.mrna1;geneID=FBgn0033342.1.path1;Name=FBgn0033342.1;Dir=sensecoverage=100.0;identity=99.9;matches=1652;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016096
Chr2	stalkie_big_nohaplotig	exon	32065275	32065821	100	-	.	Parent=FBgn0033342.1.mrna1;Target=FBgn0033342.1 1107 1653 +
Chr2	stalkie_big_nohaplotig	exon	32065891	32066921	99	-	.	Parent=FBgn0033342.1.mrna1;Target=FBgn0033342.1 76 1106 +
Chr2	stalkie_big_nohaplotig	exon	32067131	32067205	100	-	.	Parent=FBgn0033342.1.mrna1;Target=FBgn0033342.1 1 75 +
Chr2	stalkie_big_nohaplotig	CDS	32065275	32065821	.	-	1	Parent=FBgn0033342.1.mrna1;Target=FBgn0033342.1 1107 1653 +
Chr2	stalkie_big_nohaplotig	CDS	32065891	32066921	.	-	0	Parent=FBgn0033342.1.mrna1;Target=FBgn0033342.1 76 1106 +
Chr2	stalkie_big_nohaplotig	CDS	32067131	32067205	.	-	0	Parent=FBgn0033342.1.mrna1;Target=FBgn0033342.1 1 75 +
Chr2	gffcl	locus	32068934	32069191	.	-	.	ID=RLOC_00016097;geneIDs=FBgn0263029.1.path1;transcripts=FBgn0263029.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32068934	32069191	.	-	.	ID=FBgn0263029.1.mrna1;geneID=FBgn0263029.1.path1;Name=FBgn0263029.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=258;mismatches=0;indels=0;unknowns=0;Target=FBgn0263029.1 258 1 .;locus=RLOC_00016097
Chr2	stalkie_big_nohaplotig	exon	32068934	32069191	100	-	.	Parent=FBgn0263029.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	32068934	32069191	.	-	0	Parent=FBgn0263029.1.mrna1
Chr2	gffcl	locus	32077131	32077763	.	+	.	ID=RLOC_00016098;geneIDs=comp1242209_c0_seq1.path3;transcripts=comp1242209_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	32077131	32077763	.	+	.	ID=comp1242209_c0_seq1.mrna3;geneID=comp1242209_c0_seq1.path3;Name=comp1242209_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=631;mismatches=2;indels=0;unknowns=0;Target=comp1242209_c0_seq1 633 1 .;CDS_Target=comp1242209_c0_seq1 175 71 .;locus=RLOC_00016098
Chr2	stalkie_big_nohaplotig	exon	32077131	32077763	99	+	.	Parent=comp1242209_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	CDS	32077201	32077305	.	+	0	Parent=comp1242209_c0_seq1.mrna3
Chr2	gffcl	locus	32137823	32138380	.	-	.	ID=RLOC_00016099;geneIDs=comp142176_c0_seq1.path1;transcripts=comp142176_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32137823	32138380	.	-	.	ID=comp142176_c0_seq1.mrna1;geneID=comp142176_c0_seq1.path1;Name=comp142176_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=558;mismatches=0;indels=0;unknowns=0;Target=comp142176_c0_seq1 558 1 .;CDS_Target=comp142176_c0_seq1 389 327 .;locus=RLOC_00016099
Chr2	stalkie_big_nohaplotig	exon	32137823	32138380	100	-	.	Parent=comp142176_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	32137992	32138054	.	-	0	Parent=comp142176_c0_seq1.mrna1
Chr2	gffcl	locus	32143114	32143675	.	-	.	ID=RLOC_00016100;geneIDs=comp144031_c0_seq1.path1;transcripts=comp144031_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32143114	32143675	.	-	.	ID=comp144031_c0_seq1.mrna1;geneID=comp144031_c0_seq1.path1;Name=comp144031_c0_seq1;Dir=indeterminatecoverage=93.5;identity=99.8;matches=561;mismatches=0;indels=1;unknowns=0;Target=comp144031_c0_seq1 561 1 .;CDS_Target=comp144031_c0_seq1 233 96 .;locus=RLOC_00016100
Chr2	stalkie_big_nohaplotig	exon	32143114	32143675	99	-	.	Parent=comp144031_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	32143443	32143580	.	-	0	Parent=comp144031_c0_seq1.mrna1
Chr2	gffcl	locus	32164184	32166415	.	+	.	ID=RLOC_00016101;geneIDs=FBgn0041150.1.path1;transcripts=FBgn0041150.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32164184	32166415	.	+	.	ID=FBgn0041150.1.mrna1;geneID=FBgn0041150.1.path1;Name=FBgn0041150.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2231;mismatches=1;indels=0;unknowns=0;Target=FBgn0041150.1 2232 1 .;locus=RLOC_00016101
Chr2	stalkie_big_nohaplotig	exon	32164184	32166415	99	+	.	Parent=FBgn0041150.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	32164184	32166415	.	+	0	Parent=FBgn0041150.1.mrna1
Chr2	gffcl	locus	32169974	32170439	.	+	.	ID=RLOC_00016102;geneIDs=comp116296_c0_seq1.path1;transcripts=comp116296_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32169974	32170439	.	+	.	ID=comp116296_c0_seq1.mrna1;geneID=comp116296_c0_seq1.path1;Name=comp116296_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=466;mismatches=0;indels=0;unknowns=0;Target=comp116296_c0_seq1 466 1 .;CDS_Target=comp116296_c0_seq1 195 70 .;locus=RLOC_00016102
Chr2	stalkie_big_nohaplotig	exon	32169974	32170439	100	+	.	Parent=comp116296_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	32170043	32170168	.	+	0	Parent=comp116296_c0_seq1.mrna1
Chr2	gffcl	locus	32217070	32222008	.	-	.	ID=RLOC_00016103;geneIDs=comp54127_c0_seq1.path1,comp158123_c0_seq1.path1;transcripts=comp158123_c0_seq1.mrna1,comp54127_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32217070	32222008	.	-	.	ID=comp158123_c0_seq1.mrna1;geneID=comp158123_c0_seq1.path1;Name=comp158123_c0_seq1;Dir=antisensecoverage=99.3;identity=98.0;matches=1653;mismatches=32;indels=2;unknowns=0;locus=RLOC_00016103
Chr2	stalkie_big_nohaplotig	exon	32217070	32217267	98	-	.	Parent=comp158123_c0_seq1.mrna1;Target=comp158123_c0_seq1 7 204 -
Chr2	stalkie_big_nohaplotig	exon	32218096	32218141	100	-	.	Parent=comp158123_c0_seq1.mrna1;Target=comp158123_c0_seq1 205 250 -
Chr2	stalkie_big_nohaplotig	exon	32218203	32218343	100	-	.	Parent=comp158123_c0_seq1.mrna1;Target=comp158123_c0_seq1 251 391 -
Chr2	stalkie_big_nohaplotig	exon	32218455	32218544	100	-	.	Parent=comp158123_c0_seq1.mrna1;Target=comp158123_c0_seq1 392 481 -
Chr2	stalkie_big_nohaplotig	exon	32218980	32219208	100	-	.	Parent=comp158123_c0_seq1.mrna1;Target=comp158123_c0_seq1 482 710 -
Chr2	stalkie_big_nohaplotig	exon	32219728	32220229	95	-	.	Parent=comp158123_c0_seq1.mrna1;Target=comp158123_c0_seq1 711 1213 -
Chr2	stalkie_big_nohaplotig	exon	32220639	32220837	96	-	.	Parent=comp158123_c0_seq1.mrna1;Target=comp158123_c0_seq1 1214 1412 -
Chr2	stalkie_big_nohaplotig	exon	32221579	32221671	98	-	.	Parent=comp158123_c0_seq1.mrna1;Target=comp158123_c0_seq1 1413 1505 -
Chr2	stalkie_big_nohaplotig	exon	32221822	32222008	98	-	.	Parent=comp158123_c0_seq1.mrna1;Target=comp158123_c0_seq1 1506 1693 -
Chr2	stalkie_big_nohaplotig	CDS	32221640	32221671	.	-	0	Parent=comp158123_c0_seq1.mrna1;Target=comp158123_c0_seq1 1474 1505 .
Chr2	stalkie_big_nohaplotig	CDS	32221822	32222007	.	-	0	Parent=comp158123_c0_seq1.mrna1;Target=comp158123_c0_seq1 1506 1692 .
Chr2	stalkie_big_nohaplotig	mRNA	32217244	32218118	.	-	.	ID=comp54127_c0_seq1.mrna1;geneID=comp54127_c0_seq1.path1;Name=comp54127_c0_seq1;Dir=antisensecoverage=100.0;identity=95.7;matches=405;mismatches=17;indels=1;unknowns=0;locus=RLOC_00016103
Chr2	stalkie_big_nohaplotig	exon	32217244	32217267	100	-	.	Parent=comp54127_c0_seq1.mrna1;Target=comp54127_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	exon	32217487	32217600	95	-	.	Parent=comp54127_c0_seq1.mrna1;Target=comp54127_c0_seq1 25 138 -
Chr2	stalkie_big_nohaplotig	exon	32217675	32217936	95	-	.	Parent=comp54127_c0_seq1.mrna1;Target=comp54127_c0_seq1 139 399 -
Chr2	stalkie_big_nohaplotig	exon	32218096	32218118	100	-	.	Parent=comp54127_c0_seq1.mrna1;Target=comp54127_c0_seq1 419 441 -
Chr2	stalkie_big_nohaplotig	CDS	32217871	32217936	.	-	1	Parent=comp54127_c0_seq1.mrna1;Target=comp54127_c0_seq1 334 399 .
Chr2	stalkie_big_nohaplotig	CDS	32218096	32218118	.	-	0	Parent=comp54127_c0_seq1.mrna1;Target=comp54127_c0_seq1 419 441 .
Chr2	gffcl	locus	32259841	32262058	.	+	.	ID=RLOC_00016104;geneIDs=comp154015_c0_seq1.path1;transcripts=comp154015_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32259841	32262058	.	+	.	ID=comp154015_c0_seq1.mrna1;geneID=comp154015_c0_seq1.path1;Name=comp154015_c0_seq1;Dir=sensecoverage=98.4;identity=96.6;matches=829;mismatches=25;indels=4;unknowns=0;locus=RLOC_00016104
Chr2	stalkie_big_nohaplotig	exon	32259841	32260053	95	+	.	Parent=comp154015_c0_seq1.mrna1;Target=comp154015_c0_seq1 13 229 +
Chr2	stalkie_big_nohaplotig	exon	32261230	32261374	99	+	.	Parent=comp154015_c0_seq1.mrna1;Target=comp154015_c0_seq1 230 374 +
Chr2	stalkie_big_nohaplotig	exon	32261435	32261617	97	+	.	Parent=comp154015_c0_seq1.mrna1;Target=comp154015_c0_seq1 375 557 +
Chr2	stalkie_big_nohaplotig	exon	32261677	32261906	94	+	.	Parent=comp154015_c0_seq1.mrna1;Target=comp154015_c0_seq1 558 787 +
Chr2	stalkie_big_nohaplotig	exon	32261976	32262058	97	+	.	Parent=comp154015_c0_seq1.mrna1;Target=comp154015_c0_seq1 788 870 +
Chr2	stalkie_big_nohaplotig	CDS	32260038	32260053	.	+	0	Parent=comp154015_c0_seq1.mrna1;Target=comp154015_c0_seq1 214 229 +
Chr2	stalkie_big_nohaplotig	CDS	32261230	32261374	.	+	2	Parent=comp154015_c0_seq1.mrna1;Target=comp154015_c0_seq1 230 374 +
Chr2	stalkie_big_nohaplotig	CDS	32261435	32261617	.	+	1	Parent=comp154015_c0_seq1.mrna1;Target=comp154015_c0_seq1 375 557 +
Chr2	stalkie_big_nohaplotig	CDS	32261677	32261906	.	+	1	Parent=comp154015_c0_seq1.mrna1;Target=comp154015_c0_seq1 558 787 +
Chr2	stalkie_big_nohaplotig	CDS	32261976	32261977	.	+	2	Parent=comp154015_c0_seq1.mrna1;Target=comp154015_c0_seq1 788 789 +
Chr2	gffcl	locus	32278174	32296174	.	+	.	ID=RLOC_00016105;geneIDs=FBgn0259210.1.path1,comp160871_c0_seq1.path1;transcripts=comp160871_c0_seq1.mrna1,FBgn0259210.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32278174	32296174	.	+	.	ID=comp160871_c0_seq1.mrna1;geneID=comp160871_c0_seq1.path1;Name=comp160871_c0_seq1;Dir=sensecoverage=99.7;identity=99.5;matches=3112;mismatches=15;indels=0;unknowns=0;locus=RLOC_00016105
Chr2	stalkie_big_nohaplotig	exon	32278174	32278399	100	+	.	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 14 239 +
Chr2	stalkie_big_nohaplotig	exon	32280786	32280841	98	+	.	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 240 295 +
Chr2	stalkie_big_nohaplotig	exon	32280976	32281205	100	+	.	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 296 525 +
Chr2	stalkie_big_nohaplotig	exon	32281270	32281457	99	+	.	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 526 713 +
Chr2	stalkie_big_nohaplotig	exon	32281752	32281847	96	+	.	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 714 809 +
Chr2	stalkie_big_nohaplotig	exon	32283800	32284011	100	+	.	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 810 1021 +
Chr2	stalkie_big_nohaplotig	exon	32284250	32284406	99	+	.	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 1022 1178 +
Chr2	stalkie_big_nohaplotig	exon	32287580	32288123	99	+	.	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 1179 1722 +
Chr2	stalkie_big_nohaplotig	exon	32291028	32291319	97	+	.	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 1723 2014 +
Chr2	stalkie_big_nohaplotig	exon	32293632	32293885	99	+	.	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 2015 2268 +
Chr2	stalkie_big_nohaplotig	exon	32294844	32294895	100	+	.	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 3015 3066 +
Chr2	stalkie_big_nohaplotig	exon	32295112	32295306	100	+	.	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 3067 3261 +
Chr2	stalkie_big_nohaplotig	exon	32295477	32295563	100	+	.	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 3262 3348 +
Chr2	stalkie_big_nohaplotig	exon	32295638	32296174	100	+	.	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 3349 3885 +
Chr2	stalkie_big_nohaplotig	CDS	32278231	32278399	.	+	0	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 71 239 +
Chr2	stalkie_big_nohaplotig	CDS	32280786	32280841	.	+	2	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 240 295 +
Chr2	stalkie_big_nohaplotig	CDS	32280976	32281205	.	+	0	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 296 525 +
Chr2	stalkie_big_nohaplotig	CDS	32281270	32281457	.	+	1	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 526 713 +
Chr2	stalkie_big_nohaplotig	CDS	32281752	32281847	.	+	2	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 714 809 +
Chr2	stalkie_big_nohaplotig	CDS	32283800	32284011	.	+	2	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 810 1021 +
Chr2	stalkie_big_nohaplotig	CDS	32284250	32284406	.	+	0	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 1022 1178 +
Chr2	stalkie_big_nohaplotig	CDS	32287580	32288123	.	+	2	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 1179 1722 +
Chr2	stalkie_big_nohaplotig	CDS	32291028	32291319	.	+	1	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 1723 2014 +
Chr2	stalkie_big_nohaplotig	CDS	32293632	32293885	.	+	0	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 2015 2268 +
Chr2	stalkie_big_nohaplotig	CDS	32294844	32294895	.	+	1	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 3015 3066 +
Chr2	stalkie_big_nohaplotig	CDS	32295112	32295306	.	+	0	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 3067 3261 +
Chr2	stalkie_big_nohaplotig	CDS	32295477	32295563	.	+	0	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 3262 3348 +
Chr2	stalkie_big_nohaplotig	CDS	32295638	32295719	.	+	0	Parent=comp160871_c0_seq1.mrna1;Target=comp160871_c0_seq1 3349 3430 +
Chr2	stalkie_big_nohaplotig	mRNA	32278216	32295845	.	+	.	ID=FBgn0259210.1.mrna1;geneID=FBgn0259210.1.path1;Name=FBgn0259210.1;Dir=sensecoverage=100.0;identity=99.4;matches=2651;mismatches=15;indels=0;unknowns=26;locus=RLOC_00016105
Chr2	stalkie_big_nohaplotig	exon	32278216	32278399	100	+	.	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 1 184 +
Chr2	stalkie_big_nohaplotig	exon	32280786	32280841	98	+	.	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 185 240 +
Chr2	stalkie_big_nohaplotig	exon	32280976	32281205	100	+	.	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 241 470 +
Chr2	stalkie_big_nohaplotig	exon	32281270	32281457	99	+	.	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 471 658 +
Chr2	stalkie_big_nohaplotig	exon	32281752	32281847	96	+	.	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 659 754 +
Chr2	stalkie_big_nohaplotig	exon	32283800	32284011	100	+	.	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 755 966 +
Chr2	stalkie_big_nohaplotig	exon	32284250	32284406	99	+	.	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 967 1123 +
Chr2	stalkie_big_nohaplotig	exon	32287580	32288123	99	+	.	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 1124 1667 +
Chr2	stalkie_big_nohaplotig	exon	32291028	32291319	97	+	.	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 1668 1959 +
Chr2	stalkie_big_nohaplotig	exon	32293632	32293885	99	+	.	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 1960 2213 +
Chr2	stalkie_big_nohaplotig	exon	32294818	32294895	100	+	.	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 2934 3011 +
Chr2	stalkie_big_nohaplotig	exon	32295112	32295306	100	+	.	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 3012 3206 +
Chr2	stalkie_big_nohaplotig	exon	32295477	32295563	100	+	.	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 3207 3293 +
Chr2	stalkie_big_nohaplotig	exon	32295638	32295718	100	+	.	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 3294 3374 +
Chr2	stalkie_big_nohaplotig	exon	32295809	32295845	100	+	.	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 3375 3411 +
Chr2	stalkie_big_nohaplotig	CDS	32278216	32278399	.	+	0	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 1 184 +
Chr2	stalkie_big_nohaplotig	CDS	32280786	32280841	.	+	2	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 185 240 +
Chr2	stalkie_big_nohaplotig	CDS	32280976	32281205	.	+	0	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 241 470 +
Chr2	stalkie_big_nohaplotig	CDS	32281270	32281457	.	+	1	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 471 658 +
Chr2	stalkie_big_nohaplotig	CDS	32281752	32281847	.	+	2	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 659 754 +
Chr2	stalkie_big_nohaplotig	CDS	32283800	32284011	.	+	2	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 755 966 +
Chr2	stalkie_big_nohaplotig	CDS	32284250	32284406	.	+	0	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 967 1123 +
Chr2	stalkie_big_nohaplotig	CDS	32287580	32288123	.	+	2	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 1124 1667 +
Chr2	stalkie_big_nohaplotig	CDS	32291028	32291319	.	+	1	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 1668 1959 +
Chr2	stalkie_big_nohaplotig	CDS	32293632	32293885	.	+	0	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 1960 2213 +
Chr2	stalkie_big_nohaplotig	CDS	32294818	32294895	.	+	1	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 2934 3011 +
Chr2	stalkie_big_nohaplotig	CDS	32295112	32295306	.	+	1	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 3012 3206 +
Chr2	stalkie_big_nohaplotig	CDS	32295477	32295563	.	+	1	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 3207 3293 +
Chr2	stalkie_big_nohaplotig	CDS	32295638	32295718	.	+	1	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 3294 3374 +
Chr2	stalkie_big_nohaplotig	CDS	32295809	32295845	.	+	1	Parent=FBgn0259210.1.mrna1;Target=FBgn0259210.1 3375 3411 +
Chr2	gffcl	locus	32301842	32304094	.	-	.	ID=RLOC_00016106;geneIDs=FBgn0035002.1.path1;transcripts=FBgn0035002.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32301842	32304094	.	-	.	ID=FBgn0035002.1.mrna1;geneID=FBgn0035002.1.path1;Name=FBgn0035002.1;Dir=sensecoverage=100.0;identity=100.0;matches=2199;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016106
Chr2	stalkie_big_nohaplotig	exon	32301842	32303763	100	-	.	Parent=FBgn0035002.1.mrna1;Target=FBgn0035002.1 278 2199 +
Chr2	stalkie_big_nohaplotig	exon	32303818	32304094	100	-	.	Parent=FBgn0035002.1.mrna1;Target=FBgn0035002.1 1 277 +
Chr2	stalkie_big_nohaplotig	CDS	32301842	32303763	.	-	2	Parent=FBgn0035002.1.mrna1;Target=FBgn0035002.1 278 2199 +
Chr2	stalkie_big_nohaplotig	CDS	32303818	32304094	.	-	0	Parent=FBgn0035002.1.mrna1;Target=FBgn0035002.1 1 277 +
Chr2	gffcl	locus	32304392	32306035	.	-	.	ID=RLOC_00016107;geneIDs=FBgn0034214.1.path1;transcripts=FBgn0034214.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32304392	32306035	.	-	.	ID=FBgn0034214.1.mrna1;geneID=FBgn0034214.1.path1;Name=FBgn0034214.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1642;mismatches=2;indels=0;unknowns=0;Target=FBgn0034214.1 1644 1 .;locus=RLOC_00016107
Chr2	stalkie_big_nohaplotig	exon	32304392	32306035	99	-	.	Parent=FBgn0034214.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	32304392	32306035	.	-	0	Parent=FBgn0034214.1.mrna1
Chr2	gffcl	locus	32320354	32320992	.	-	.	ID=RLOC_00016108;geneIDs=comp142874_c0_seq1.path1;transcripts=comp142874_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32320354	32320992	.	-	.	ID=comp142874_c0_seq1.mrna1;geneID=comp142874_c0_seq1.path1;Name=comp142874_c0_seq1;Dir=antisensecoverage=90.8;identity=100.0;matches=579;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016108
Chr2	stalkie_big_nohaplotig	exon	32320354	32320796	100	-	.	Parent=comp142874_c0_seq1.mrna1;Target=comp142874_c0_seq1 15 457 -
Chr2	stalkie_big_nohaplotig	exon	32320857	32320992	100	-	.	Parent=comp142874_c0_seq1.mrna1;Target=comp142874_c0_seq1 458 593 -
Chr2	stalkie_big_nohaplotig	CDS	32320485	32320796	.	-	0	Parent=comp142874_c0_seq1.mrna1;Target=comp142874_c0_seq1 146 457 .
Chr2	stalkie_big_nohaplotig	CDS	32320857	32320859	.	-	0	Parent=comp142874_c0_seq1.mrna1;Target=comp142874_c0_seq1 458 460 .
Chr2	gffcl	locus	32333762	32342816	.	+	.	ID=RLOC_00016109;geneIDs=FBgn0263864.1.path1;transcripts=FBgn0263864.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32333762	32342816	.	+	.	ID=FBgn0263864.1.mrna1;geneID=FBgn0263864.1.path1;Name=FBgn0263864.1;Dir=sensecoverage=100.0;identity=99.5;matches=2624;mismatches=12;indels=1;unknowns=0;Target=FBgn0263864.1 3 56 +;locus=RLOC_00016109
Chr2	stalkie_big_nohaplotig	exon	32333762	32333942	98	+	.	Parent=FBgn0263864.1.mrna1;Target=FBgn0263864.1 1 182 +
Chr2	stalkie_big_nohaplotig	exon	32334006	32334324	100	+	.	Parent=FBgn0263864.1.mrna1;Target=FBgn0263864.1 183 501 +
Chr2	stalkie_big_nohaplotig	exon	32334396	32335358	99	+	.	Parent=FBgn0263864.1.mrna1;Target=FBgn0263864.1 502 1464 +
Chr2	stalkie_big_nohaplotig	exon	32336870	32337223	100	+	.	Parent=FBgn0263864.1.mrna1;Target=FBgn0263864.1 1465 1818 +
Chr2	stalkie_big_nohaplotig	exon	32337284	32337436	97	+	.	Parent=FBgn0263864.1.mrna1;Target=FBgn0263864.1 1819 1971 +
Chr2	stalkie_big_nohaplotig	exon	32342083	32342235	98	+	.	Parent=FBgn0263864.1.mrna1;Target=FBgn0263864.1 1972 2124 +
Chr2	stalkie_big_nohaplotig	exon	32342304	32342816	99	+	.	Parent=FBgn0263864.1.mrna1;Target=FBgn0263864.1 2125 2637 +
Chr2	stalkie_big_nohaplotig	CDS	32333764	32333816	.	+	0	Parent=FBgn0263864.1.mrna1
Chr2	gffcl	locus	32344816	32345299	.	-	.	ID=RLOC_00016110;geneIDs=comp151914_c0_seq1.path2;transcripts=comp151914_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	32344816	32345299	.	-	.	ID=comp151914_c0_seq1.mrna2;geneID=comp151914_c0_seq1.path2;Name=comp151914_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=480;mismatches=4;indels=5;unknowns=0;Target=comp151914_c0_seq1 489 1 .;CDS_Target=comp151914_c0_seq1 215 120 .;locus=RLOC_00016110
Chr2	stalkie_big_nohaplotig	exon	32344816	32345299	98	-	.	Parent=comp151914_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	32345085	32345180	.	-	0	Parent=comp151914_c0_seq1.mrna2
Chr2	gffcl	locus	32354474	32356564	.	-	.	ID=RLOC_00016112;geneIDs=FBgn0033348.1.path1;transcripts=FBgn0033348.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32354474	32356564	.	-	.	ID=FBgn0033348.1.mrna1;geneID=FBgn0033348.1.path1;Name=FBgn0033348.1;Dir=sensecoverage=100.0;identity=99.8;matches=1782;mismatches=2;indels=1;unknowns=0;locus=RLOC_00016112
Chr2	stalkie_big_nohaplotig	exon	32354474	32355239	99	-	.	Parent=FBgn0033348.1.mrna1;Target=FBgn0033348.1 1019 1785 +
Chr2	stalkie_big_nohaplotig	exon	32355313	32355643	99	-	.	Parent=FBgn0033348.1.mrna1;Target=FBgn0033348.1 688 1018 +
Chr2	stalkie_big_nohaplotig	exon	32355698	32355817	100	-	.	Parent=FBgn0033348.1.mrna1;Target=FBgn0033348.1 568 687 +
Chr2	stalkie_big_nohaplotig	exon	32355877	32356089	100	-	.	Parent=FBgn0033348.1.mrna1;Target=FBgn0033348.1 355 567 +
Chr2	stalkie_big_nohaplotig	exon	32356152	32356343	100	-	.	Parent=FBgn0033348.1.mrna1;Target=FBgn0033348.1 163 354 +
Chr2	stalkie_big_nohaplotig	exon	32356403	32356564	100	-	.	Parent=FBgn0033348.1.mrna1;Target=FBgn0033348.1 1 162 +
Chr2	stalkie_big_nohaplotig	CDS	32354474	32355239	.	-	2	Parent=FBgn0033348.1.mrna1;Target=FBgn0033348.1 1019 1785 +
Chr2	stalkie_big_nohaplotig	CDS	32355313	32355643	.	-	0	Parent=FBgn0033348.1.mrna1;Target=FBgn0033348.1 688 1018 +
Chr2	stalkie_big_nohaplotig	CDS	32355698	32355817	.	-	0	Parent=FBgn0033348.1.mrna1;Target=FBgn0033348.1 568 687 +
Chr2	stalkie_big_nohaplotig	CDS	32355877	32356089	.	-	0	Parent=FBgn0033348.1.mrna1;Target=FBgn0033348.1 355 567 +
Chr2	stalkie_big_nohaplotig	CDS	32356152	32356343	.	-	0	Parent=FBgn0033348.1.mrna1;Target=FBgn0033348.1 163 354 +
Chr2	stalkie_big_nohaplotig	CDS	32356403	32356564	.	-	0	Parent=FBgn0033348.1.mrna1;Target=FBgn0033348.1 1 162 +
Chr2	gffcl	locus	32358568	32362684	.	+	.	ID=RLOC_00016113;geneIDs=FBgn0033349.1.path1;transcripts=FBgn0033349.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32358568	32362684	.	+	.	ID=FBgn0033349.1.mrna1;geneID=FBgn0033349.1.path1;Name=FBgn0033349.1;Dir=sensecoverage=100.0;identity=100.0;matches=1536;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016113
Chr2	stalkie_big_nohaplotig	exon	32358568	32358697	100	+	.	Parent=FBgn0033349.1.mrna1;Target=FBgn0033349.1 1 130 +
Chr2	stalkie_big_nohaplotig	exon	32361279	32362684	100	+	.	Parent=FBgn0033349.1.mrna1;Target=FBgn0033349.1 131 1536 +
Chr2	stalkie_big_nohaplotig	CDS	32358568	32358697	.	+	0	Parent=FBgn0033349.1.mrna1;Target=FBgn0033349.1 1 130 +
Chr2	stalkie_big_nohaplotig	CDS	32361279	32362684	.	+	2	Parent=FBgn0033349.1.mrna1;Target=FBgn0033349.1 131 1536 +
Chr2	gffcl	locus	32364000	32364656	.	-	.	ID=RLOC_00016114;geneIDs=comp119312_c0_seq1.path1;transcripts=comp119312_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32364000	32364656	.	-	.	ID=comp119312_c0_seq1.mrna1;geneID=comp119312_c0_seq1.path1;Name=comp119312_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=655;mismatches=2;indels=0;unknowns=0;Target=comp119312_c0_seq1 657 1 .;CDS_Target=comp119312_c0_seq1 361 329 .;locus=RLOC_00016114
Chr2	stalkie_big_nohaplotig	exon	32364000	32364656	99	-	.	Parent=comp119312_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	32364296	32364328	.	-	0	Parent=comp119312_c0_seq1.mrna1
Chr2	gffcl	locus	32371581	32372549	.	-	.	ID=RLOC_00016115;geneIDs=FBgn0039664.1.path1;transcripts=FBgn0039664.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32371581	32372549	.	-	.	ID=FBgn0039664.1.mrna1;geneID=FBgn0039664.1.path1;Name=FBgn0039664.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=969;mismatches=0;indels=0;unknowns=0;Target=FBgn0039664.1 969 1 .;locus=RLOC_00016115
Chr2	stalkie_big_nohaplotig	exon	32371581	32372549	100	-	.	Parent=FBgn0039664.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	32371581	32372549	.	-	0	Parent=FBgn0039664.1.mrna1
Chr2	gffcl	locus	32374641	32375741	.	+	.	ID=RLOC_00016116;geneIDs=FBgn0033350.1.path1;transcripts=FBgn0033350.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32374641	32375741	.	+	.	ID=FBgn0033350.1.mrna1;geneID=FBgn0033350.1.path1;Name=FBgn0033350.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1101;mismatches=0;indels=0;unknowns=0;Target=FBgn0033350.1 1101 1 .;locus=RLOC_00016116
Chr2	stalkie_big_nohaplotig	exon	32374641	32375741	100	+	.	Parent=FBgn0033350.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	32374641	32375741	.	+	0	Parent=FBgn0033350.1.mrna1
Chr2	gffcl	locus	32385498	32385959	.	-	.	ID=RLOC_00016117;geneIDs=comp135741_c0_seq1.path1;transcripts=comp135741_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32385498	32385959	.	-	.	ID=comp135741_c0_seq1.mrna1;geneID=comp135741_c0_seq1.path1;Name=comp135741_c0_seq1;Dir=indeterminatecoverage=86.0;identity=100.0;matches=462;mismatches=0;indels=0;unknowns=0;Target=comp135741_c0_seq1 523 62 .;CDS_Target=comp135741_c0_seq1 521 468 .;locus=RLOC_00016117
Chr2	stalkie_big_nohaplotig	exon	32385498	32385959	100	-	.	Parent=comp135741_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	32385500	32385553	.	-	0	Parent=comp135741_c0_seq1.mrna1
Chr2	gffcl	locus	32386431	32395077	.	-	.	ID=RLOC_00016118;geneIDs=FBgn0019886.1.path1;transcripts=FBgn0019886.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32386431	32395077	.	-	.	ID=FBgn0019886.1.mrna1;geneID=FBgn0019886.1.path1;Name=FBgn0019886.1;Dir=sensecoverage=100.0;identity=99.8;matches=2555;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016118
Chr2	stalkie_big_nohaplotig	exon	32386431	32386559	100	-	.	Parent=FBgn0019886.1.mrna1;Target=FBgn0019886.1 2431 2559 +
Chr2	stalkie_big_nohaplotig	exon	32386614	32386901	100	-	.	Parent=FBgn0019886.1.mrna1;Target=FBgn0019886.1 2143 2430 +
Chr2	stalkie_big_nohaplotig	exon	32386972	32387076	99	-	.	Parent=FBgn0019886.1.mrna1;Target=FBgn0019886.1 2038 2142 +
Chr2	stalkie_big_nohaplotig	exon	32387148	32389102	99	-	.	Parent=FBgn0019886.1.mrna1;Target=FBgn0019886.1 83 2037 +
Chr2	stalkie_big_nohaplotig	exon	32394996	32395077	100	-	.	Parent=FBgn0019886.1.mrna1;Target=FBgn0019886.1 1 82 +
Chr2	stalkie_big_nohaplotig	CDS	32386431	32386559	.	-	0	Parent=FBgn0019886.1.mrna1;Target=FBgn0019886.1 2431 2559 +
Chr2	stalkie_big_nohaplotig	CDS	32386614	32386901	.	-	0	Parent=FBgn0019886.1.mrna1;Target=FBgn0019886.1 2143 2430 +
Chr2	stalkie_big_nohaplotig	CDS	32386972	32387076	.	-	0	Parent=FBgn0019886.1.mrna1;Target=FBgn0019886.1 2038 2142 +
Chr2	stalkie_big_nohaplotig	CDS	32387148	32389102	.	-	2	Parent=FBgn0019886.1.mrna1;Target=FBgn0019886.1 83 2037 +
Chr2	stalkie_big_nohaplotig	CDS	32394996	32395077	.	-	0	Parent=FBgn0019886.1.mrna1;Target=FBgn0019886.1 1 82 +
Chr2	gffcl	locus	32397725	32398270	.	+	.	ID=RLOC_00016119;geneIDs=FBgn0261067.1.path1;transcripts=FBgn0261067.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32397725	32398270	.	+	.	ID=FBgn0261067.1.mrna1;geneID=FBgn0261067.1.path1;Name=FBgn0261067.1;Dir=sensecoverage=100.0;identity=100.0;matches=429;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016119
Chr2	stalkie_big_nohaplotig	exon	32397725	32397797	100	+	.	Parent=FBgn0261067.1.mrna1;Target=FBgn0261067.1 1 73 +
Chr2	stalkie_big_nohaplotig	exon	32397857	32398041	100	+	.	Parent=FBgn0261067.1.mrna1;Target=FBgn0261067.1 74 258 +
Chr2	stalkie_big_nohaplotig	exon	32398100	32398270	100	+	.	Parent=FBgn0261067.1.mrna1;Target=FBgn0261067.1 259 429 +
Chr2	stalkie_big_nohaplotig	CDS	32397725	32397797	.	+	0	Parent=FBgn0261067.1.mrna1;Target=FBgn0261067.1 1 73 +
Chr2	stalkie_big_nohaplotig	CDS	32397857	32398041	.	+	2	Parent=FBgn0261067.1.mrna1;Target=FBgn0261067.1 74 258 +
Chr2	stalkie_big_nohaplotig	CDS	32398100	32398270	.	+	0	Parent=FBgn0261067.1.mrna1;Target=FBgn0261067.1 259 429 +
Chr2	gffcl	locus	32400883	32414569	.	-	.	ID=RLOC_00016120;geneIDs=FBgn0034598.1.path1;transcripts=FBgn0034598.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32400883	32414569	.	-	.	ID=FBgn0034598.1.mrna1;geneID=FBgn0034598.1.path1;Name=FBgn0034598.1;Dir=sensecoverage=100.0;identity=99.8;matches=3387;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016120
Chr2	stalkie_big_nohaplotig	exon	32400883	32401691	99	-	.	Parent=FBgn0034598.1.mrna1;Target=FBgn0034598.1 2585 3393 +
Chr2	stalkie_big_nohaplotig	exon	32401757	32401984	100	-	.	Parent=FBgn0034598.1.mrna1;Target=FBgn0034598.1 2357 2584 +
Chr2	stalkie_big_nohaplotig	exon	32402074	32403306	99	-	.	Parent=FBgn0034598.1.mrna1;Target=FBgn0034598.1 1124 2356 +
Chr2	stalkie_big_nohaplotig	exon	32406253	32406559	100	-	.	Parent=FBgn0034598.1.mrna1;Target=FBgn0034598.1 817 1123 +
Chr2	stalkie_big_nohaplotig	exon	32408527	32408604	100	-	.	Parent=FBgn0034598.1.mrna1;Target=FBgn0034598.1 739 816 +
Chr2	stalkie_big_nohaplotig	exon	32408682	32408831	99	-	.	Parent=FBgn0034598.1.mrna1;Target=FBgn0034598.1 589 738 +
Chr2	stalkie_big_nohaplotig	exon	32413487	32414038	99	-	.	Parent=FBgn0034598.1.mrna1;Target=FBgn0034598.1 37 588 +
Chr2	stalkie_big_nohaplotig	exon	32414534	32414569	100	-	.	Parent=FBgn0034598.1.mrna1;Target=FBgn0034598.1 1 36 +
Chr2	stalkie_big_nohaplotig	CDS	32400883	32401691	.	-	2	Parent=FBgn0034598.1.mrna1;Target=FBgn0034598.1 2585 3393 +
Chr2	stalkie_big_nohaplotig	CDS	32401757	32401984	.	-	2	Parent=FBgn0034598.1.mrna1;Target=FBgn0034598.1 2357 2584 +
Chr2	stalkie_big_nohaplotig	CDS	32402074	32403306	.	-	2	Parent=FBgn0034598.1.mrna1;Target=FBgn0034598.1 1124 2356 +
Chr2	stalkie_big_nohaplotig	CDS	32406253	32406559	.	-	0	Parent=FBgn0034598.1.mrna1;Target=FBgn0034598.1 817 1123 +
Chr2	stalkie_big_nohaplotig	CDS	32408527	32408604	.	-	0	Parent=FBgn0034598.1.mrna1;Target=FBgn0034598.1 739 816 +
Chr2	stalkie_big_nohaplotig	CDS	32408682	32408831	.	-	0	Parent=FBgn0034598.1.mrna1;Target=FBgn0034598.1 589 738 +
Chr2	stalkie_big_nohaplotig	CDS	32413487	32414038	.	-	0	Parent=FBgn0034598.1.mrna1;Target=FBgn0034598.1 37 588 +
Chr2	stalkie_big_nohaplotig	CDS	32414534	32414569	.	-	0	Parent=FBgn0034598.1.mrna1;Target=FBgn0034598.1 1 36 +
Chr2	gffcl	locus	32415213	32416224	.	+	.	ID=RLOC_00016121;geneIDs=FBgn0034599.1.path1;transcripts=FBgn0034599.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32415213	32416224	.	+	.	ID=FBgn0034599.1.mrna1;geneID=FBgn0034599.1.path1;Name=FBgn0034599.1;Dir=sensecoverage=100.0;identity=99.7;matches=885;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016121
Chr2	stalkie_big_nohaplotig	exon	32415213	32415529	99	+	.	Parent=FBgn0034599.1.mrna1;Target=FBgn0034599.1 1 317 +
Chr2	stalkie_big_nohaplotig	exon	32415590	32415789	100	+	.	Parent=FBgn0034599.1.mrna1;Target=FBgn0034599.1 318 517 +
Chr2	stalkie_big_nohaplotig	exon	32415854	32416224	99	+	.	Parent=FBgn0034599.1.mrna1;Target=FBgn0034599.1 518 888 +
Chr2	stalkie_big_nohaplotig	CDS	32415213	32415529	.	+	0	Parent=FBgn0034599.1.mrna1;Target=FBgn0034599.1 1 317 +
Chr2	stalkie_big_nohaplotig	CDS	32415590	32415789	.	+	1	Parent=FBgn0034599.1.mrna1;Target=FBgn0034599.1 318 517 +
Chr2	stalkie_big_nohaplotig	CDS	32415854	32416224	.	+	2	Parent=FBgn0034599.1.mrna1;Target=FBgn0034599.1 518 888 +
Chr2	gffcl	locus	32417861	32418766	.	-	.	ID=RLOC_00016122;geneIDs=FBgn0250843.1.path1;transcripts=FBgn0250843.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32417861	32418766	.	-	.	ID=FBgn0250843.1.mrna1;geneID=FBgn0250843.1.path1;Name=FBgn0250843.1;Dir=sensecoverage=99.4;identity=99.5;matches=843;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016122
Chr2	stalkie_big_nohaplotig	exon	32417861	32418067	99	-	.	Parent=FBgn0250843.1.mrna1;Target=FBgn0250843.1 646 852 +
Chr2	stalkie_big_nohaplotig	exon	32418127	32418766	99	-	.	Parent=FBgn0250843.1.mrna1;Target=FBgn0250843.1 6 645 +
Chr2	stalkie_big_nohaplotig	CDS	32417861	32418067	.	-	0	Parent=FBgn0250843.1.mrna1;Target=FBgn0250843.1 646 852 +
Chr2	stalkie_big_nohaplotig	CDS	32418127	32418765	.	-	0	Parent=FBgn0250843.1.mrna1;Target=FBgn0250843.1 7 645 +
Chr2	gffcl	locus	32420017	32421343	.	+	.	ID=RLOC_00016123;geneIDs=FBgn0004867.1.path1;transcripts=FBgn0004867.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32420017	32421343	.	+	.	ID=FBgn0004867.1.mrna1;geneID=FBgn0004867.1.path1;Name=FBgn0004867.1;Dir=sensecoverage=100.0;identity=99.5;matches=940;mismatches=5;indels=0;unknowns=0;locus=RLOC_00016123
Chr2	stalkie_big_nohaplotig	exon	32420017	32420147	97	+	.	Parent=FBgn0004867.1.mrna1;Target=FBgn0004867.1 1 131 +
Chr2	stalkie_big_nohaplotig	exon	32420530	32421343	99	+	.	Parent=FBgn0004867.1.mrna1;Target=FBgn0004867.1 132 945 +
Chr2	stalkie_big_nohaplotig	CDS	32420017	32420147	.	+	0	Parent=FBgn0004867.1.mrna1;Target=FBgn0004867.1 1 131 +
Chr2	stalkie_big_nohaplotig	CDS	32420530	32421343	.	+	1	Parent=FBgn0004867.1.mrna1;Target=FBgn0004867.1 132 945 +
Chr2	gffcl	locus	32424570	32433296	.	-	.	ID=RLOC_00016124;geneIDs=FBgn0021796.1.path1;transcripts=FBgn0021796.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32424570	32433296	.	-	.	ID=FBgn0021796.1.mrna1;geneID=FBgn0021796.1.path1;Name=FBgn0021796.1;Dir=sensecoverage=100.0;identity=99.7;matches=7364;mismatches=25;indels=0;unknowns=0;locus=RLOC_00016124
Chr2	stalkie_big_nohaplotig	exon	32424570	32429727	99	-	.	Parent=FBgn0021796.1.mrna1;Target=FBgn0021796.1 2232 7389 +
Chr2	stalkie_big_nohaplotig	exon	32430476	32430952	99	-	.	Parent=FBgn0021796.1.mrna1;Target=FBgn0021796.1 1755 2231 +
Chr2	stalkie_big_nohaplotig	exon	32431017	32431750	99	-	.	Parent=FBgn0021796.1.mrna1;Target=FBgn0021796.1 1021 1754 +
Chr2	stalkie_big_nohaplotig	exon	32431844	32432410	100	-	.	Parent=FBgn0021796.1.mrna1;Target=FBgn0021796.1 454 1020 +
Chr2	stalkie_big_nohaplotig	exon	32432763	32432980	100	-	.	Parent=FBgn0021796.1.mrna1;Target=FBgn0021796.1 236 453 +
Chr2	stalkie_big_nohaplotig	exon	32433062	32433296	100	-	.	Parent=FBgn0021796.1.mrna1;Target=FBgn0021796.1 1 235 +
Chr2	stalkie_big_nohaplotig	CDS	32424570	32429727	.	-	1	Parent=FBgn0021796.1.mrna1;Target=FBgn0021796.1 2232 7389 +
Chr2	stalkie_big_nohaplotig	CDS	32430476	32430952	.	-	1	Parent=FBgn0021796.1.mrna1;Target=FBgn0021796.1 1755 2231 +
Chr2	stalkie_big_nohaplotig	CDS	32431017	32431750	.	-	0	Parent=FBgn0021796.1.mrna1;Target=FBgn0021796.1 1021 1754 +
Chr2	stalkie_big_nohaplotig	CDS	32431844	32432410	.	-	0	Parent=FBgn0021796.1.mrna1;Target=FBgn0021796.1 454 1020 +
Chr2	stalkie_big_nohaplotig	CDS	32432763	32432980	.	-	2	Parent=FBgn0021796.1.mrna1;Target=FBgn0021796.1 236 453 +
Chr2	stalkie_big_nohaplotig	CDS	32433062	32433296	.	-	0	Parent=FBgn0021796.1.mrna1;Target=FBgn0021796.1 1 235 +
Chr2	gffcl	locus	32435103	32436512	.	+	.	ID=RLOC_00016125;geneIDs=FBgn0036316.1.path1;transcripts=FBgn0036316.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32435103	32436512	.	+	.	ID=FBgn0036316.1.mrna1;geneID=FBgn0036316.1.path1;Name=FBgn0036316.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1408;mismatches=2;indels=0;unknowns=0;Target=FBgn0036316.1 1410 1 .;locus=RLOC_00016125
Chr2	stalkie_big_nohaplotig	exon	32435103	32436512	99	+	.	Parent=FBgn0036316.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	32435103	32436512	.	+	0	Parent=FBgn0036316.1.mrna1
Chr2	gffcl	locus	32438026	32438295	.	+	.	ID=RLOC_00016126;geneIDs=FBgn0034248.1.path1;transcripts=FBgn0034248.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32438026	32438295	.	+	.	ID=FBgn0034248.1.mrna1;geneID=FBgn0034248.1.path1;Name=FBgn0034248.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=270;mismatches=0;indels=0;unknowns=0;Target=FBgn0034248.1 270 1 .;locus=RLOC_00016126
Chr2	stalkie_big_nohaplotig	exon	32438026	32438295	100	+	.	Parent=FBgn0034248.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	32438026	32438295	.	+	0	Parent=FBgn0034248.1.mrna1
Chr2	gffcl	locus	32439874	32443756	.	-	.	ID=RLOC_00016127;geneIDs=FBgn0034249.1.path1;transcripts=FBgn0034249.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32439874	32443756	.	-	.	ID=FBgn0034249.1.mrna1;geneID=FBgn0034249.1.path1;Name=FBgn0034249.1;Dir=sensecoverage=100.0;identity=99.4;matches=3283;mismatches=20;indels=0;unknowns=0;locus=RLOC_00016127
Chr2	stalkie_big_nohaplotig	exon	32439874	32440330	100	-	.	Parent=FBgn0034249.1.mrna1;Target=FBgn0034249.1 2847 3303 +
Chr2	stalkie_big_nohaplotig	exon	32440407	32440768	98	-	.	Parent=FBgn0034249.1.mrna1;Target=FBgn0034249.1 2485 2846 +
Chr2	stalkie_big_nohaplotig	exon	32440999	32442105	99	-	.	Parent=FBgn0034249.1.mrna1;Target=FBgn0034249.1 1378 2484 +
Chr2	stalkie_big_nohaplotig	exon	32442203	32442357	100	-	.	Parent=FBgn0034249.1.mrna1;Target=FBgn0034249.1 1223 1377 +
Chr2	stalkie_big_nohaplotig	exon	32442417	32443247	99	-	.	Parent=FBgn0034249.1.mrna1;Target=FBgn0034249.1 392 1222 +
Chr2	stalkie_big_nohaplotig	exon	32443304	32443530	100	-	.	Parent=FBgn0034249.1.mrna1;Target=FBgn0034249.1 165 391 +
Chr2	stalkie_big_nohaplotig	exon	32443593	32443756	100	-	.	Parent=FBgn0034249.1.mrna1;Target=FBgn0034249.1 1 164 +
Chr2	stalkie_big_nohaplotig	CDS	32439874	32440330	.	-	1	Parent=FBgn0034249.1.mrna1;Target=FBgn0034249.1 2847 3303 +
Chr2	stalkie_big_nohaplotig	CDS	32440407	32440768	.	-	0	Parent=FBgn0034249.1.mrna1;Target=FBgn0034249.1 2485 2846 +
Chr2	stalkie_big_nohaplotig	CDS	32440999	32442105	.	-	0	Parent=FBgn0034249.1.mrna1;Target=FBgn0034249.1 1378 2484 +
Chr2	stalkie_big_nohaplotig	CDS	32442203	32442357	.	-	2	Parent=FBgn0034249.1.mrna1;Target=FBgn0034249.1 1223 1377 +
Chr2	stalkie_big_nohaplotig	CDS	32442417	32443247	.	-	2	Parent=FBgn0034249.1.mrna1;Target=FBgn0034249.1 392 1222 +
Chr2	stalkie_big_nohaplotig	CDS	32443304	32443530	.	-	1	Parent=FBgn0034249.1.mrna1;Target=FBgn0034249.1 165 391 +
Chr2	stalkie_big_nohaplotig	CDS	32443593	32443756	.	-	0	Parent=FBgn0034249.1.mrna1;Target=FBgn0034249.1 1 164 +
Chr2	gffcl	locus	32447059	32451019	.	+	.	ID=RLOC_00016128;geneIDs=FBgn0034504.1.path1;transcripts=FBgn0034504.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32447059	32451019	.	+	.	ID=FBgn0034504.1.mrna1;geneID=FBgn0034504.1.path1;Name=FBgn0034504.1;Dir=sensecoverage=100.0;identity=99.8;matches=1803;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016128
Chr2	stalkie_big_nohaplotig	exon	32447059	32447146	100	+	.	Parent=FBgn0034504.1.mrna1;Target=FBgn0034504.1 1 88 +
Chr2	stalkie_big_nohaplotig	exon	32447685	32448388	99	+	.	Parent=FBgn0034504.1.mrna1;Target=FBgn0034504.1 89 792 +
Chr2	stalkie_big_nohaplotig	exon	32449823	32449914	100	+	.	Parent=FBgn0034504.1.mrna1;Target=FBgn0034504.1 793 884 +
Chr2	stalkie_big_nohaplotig	exon	32449973	32450348	100	+	.	Parent=FBgn0034504.1.mrna1;Target=FBgn0034504.1 885 1260 +
Chr2	stalkie_big_nohaplotig	exon	32450412	32450822	100	+	.	Parent=FBgn0034504.1.mrna1;Target=FBgn0034504.1 1261 1671 +
Chr2	stalkie_big_nohaplotig	exon	32450885	32451019	100	+	.	Parent=FBgn0034504.1.mrna1;Target=FBgn0034504.1 1672 1806 +
Chr2	stalkie_big_nohaplotig	CDS	32447059	32447146	.	+	0	Parent=FBgn0034504.1.mrna1;Target=FBgn0034504.1 1 88 +
Chr2	stalkie_big_nohaplotig	CDS	32447685	32448388	.	+	2	Parent=FBgn0034504.1.mrna1;Target=FBgn0034504.1 89 792 +
Chr2	stalkie_big_nohaplotig	CDS	32449823	32449914	.	+	0	Parent=FBgn0034504.1.mrna1;Target=FBgn0034504.1 793 884 +
Chr2	stalkie_big_nohaplotig	CDS	32449973	32450348	.	+	1	Parent=FBgn0034504.1.mrna1;Target=FBgn0034504.1 885 1260 +
Chr2	stalkie_big_nohaplotig	CDS	32450412	32450822	.	+	0	Parent=FBgn0034504.1.mrna1;Target=FBgn0034504.1 1261 1671 +
Chr2	stalkie_big_nohaplotig	CDS	32450885	32451019	.	+	0	Parent=FBgn0034504.1.mrna1;Target=FBgn0034504.1 1672 1806 +
Chr2	gffcl	locus	32448699	32449320	.	-	.	ID=RLOC_00016129;geneIDs=comp146174_c0_seq1.path1;transcripts=comp146174_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32448699	32449320	.	-	.	ID=comp146174_c0_seq1.mrna1;geneID=comp146174_c0_seq1.path1;Name=comp146174_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.2;matches=617;mismatches=5;indels=0;unknowns=0;Target=comp146174_c0_seq1 625 4 .;CDS_Target=comp146174_c0_seq1 609 526 .;locus=RLOC_00016129
Chr2	stalkie_big_nohaplotig	exon	32448699	32449320	99	-	.	Parent=comp146174_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	32448715	32448798	.	-	0	Parent=comp146174_c0_seq1.mrna1
Chr2	gffcl	locus	32496174	32521015	.	-	.	ID=RLOC_00016130;geneIDs=FBgn0035010.1.path1;transcripts=FBgn0035010.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32496174	32521015	.	-	.	ID=FBgn0035010.1.mrna1;geneID=FBgn0035010.1.path1;Name=FBgn0035010.1;Dir=sensecoverage=96.3;identity=100.0;matches=1792;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016130
Chr2	stalkie_big_nohaplotig	exon	32496174	32496842	100	-	.	Parent=FBgn0035010.1.mrna1;Target=FBgn0035010.1 1192 1860 +
Chr2	stalkie_big_nohaplotig	exon	32510234	32510359	100	-	.	Parent=FBgn0035010.1.mrna1;Target=FBgn0035010.1 1066 1191 +
Chr2	stalkie_big_nohaplotig	exon	32510552	32510683	100	-	.	Parent=FBgn0035010.1.mrna1;Target=FBgn0035010.1 934 1065 +
Chr2	stalkie_big_nohaplotig	exon	32510966	32511285	100	-	.	Parent=FBgn0035010.1.mrna1;Target=FBgn0035010.1 614 933 +
Chr2	stalkie_big_nohaplotig	exon	32511425	32511497	100	-	.	Parent=FBgn0035010.1.mrna1;Target=FBgn0035010.1 541 613 +
Chr2	stalkie_big_nohaplotig	exon	32516348	32516464	100	-	.	Parent=FBgn0035010.1.mrna1;Target=FBgn0035010.1 424 540 +
Chr2	stalkie_big_nohaplotig	exon	32520534	32520659	100	-	.	Parent=FBgn0035010.1.mrna1;Target=FBgn0035010.1 298 423 +
Chr2	stalkie_big_nohaplotig	exon	32520787	32521015	100	-	.	Parent=FBgn0035010.1.mrna1;Target=FBgn0035010.1 69 297 +
Chr2	stalkie_big_nohaplotig	CDS	32496174	32496842	.	-	0	Parent=FBgn0035010.1.mrna1;Target=FBgn0035010.1 1192 1860 +
Chr2	stalkie_big_nohaplotig	CDS	32510234	32510359	.	-	0	Parent=FBgn0035010.1.mrna1;Target=FBgn0035010.1 1066 1191 +
Chr2	stalkie_big_nohaplotig	CDS	32510552	32510683	.	-	0	Parent=FBgn0035010.1.mrna1;Target=FBgn0035010.1 934 1065 +
Chr2	stalkie_big_nohaplotig	CDS	32510966	32511285	.	-	2	Parent=FBgn0035010.1.mrna1;Target=FBgn0035010.1 614 933 +
Chr2	stalkie_big_nohaplotig	CDS	32511425	32511497	.	-	0	Parent=FBgn0035010.1.mrna1;Target=FBgn0035010.1 541 613 +
Chr2	stalkie_big_nohaplotig	CDS	32516348	32516464	.	-	0	Parent=FBgn0035010.1.mrna1;Target=FBgn0035010.1 424 540 +
Chr2	stalkie_big_nohaplotig	CDS	32520534	32520659	.	-	0	Parent=FBgn0035010.1.mrna1;Target=FBgn0035010.1 298 423 +
Chr2	stalkie_big_nohaplotig	CDS	32520787	32521014	.	-	0	Parent=FBgn0035010.1.mrna1;Target=FBgn0035010.1 70 297 +
Chr2	gffcl	locus	32529659	32748612	.	-	.	ID=RLOC_00016131;geneIDs=comp155492_c0_seq1.path1;transcripts=comp155492_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32529659	32748612	.	-	.	ID=comp155492_c0_seq1.mrna1;geneID=comp155492_c0_seq1.path1;Name=comp155492_c0_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=1238;mismatches=6;indels=5;unknowns=0;locus=RLOC_00016131
Chr2	stalkie_big_nohaplotig	exon	32529659	32529947	96	-	.	Parent=comp155492_c0_seq1.mrna1;Target=comp155492_c0_seq1 1 286 -
Chr2	stalkie_big_nohaplotig	exon	32747521	32748016	100	-	.	Parent=comp155492_c0_seq1.mrna1;Target=comp155492_c0_seq1 287 782 -
Chr2	stalkie_big_nohaplotig	exon	32748075	32748285	100	-	.	Parent=comp155492_c0_seq1.mrna1;Target=comp155492_c0_seq1 783 993 -
Chr2	stalkie_big_nohaplotig	exon	32748361	32748612	100	-	.	Parent=comp155492_c0_seq1.mrna1;Target=comp155492_c0_seq1 994 1245 -
Chr2	stalkie_big_nohaplotig	CDS	32747834	32748016	.	-	0	Parent=comp155492_c0_seq1.mrna1;Target=comp155492_c0_seq1 600 782 .
Chr2	stalkie_big_nohaplotig	CDS	32748075	32748285	.	-	1	Parent=comp155492_c0_seq1.mrna1;Target=comp155492_c0_seq1 783 993 .
Chr2	stalkie_big_nohaplotig	CDS	32748361	32748503	.	-	0	Parent=comp155492_c0_seq1.mrna1;Target=comp155492_c0_seq1 994 1136 .
Chr2	gffcl	locus	32537479	32543510	.	-	.	ID=RLOC_00016132;geneIDs=comp163440_c3_seq1.path1;transcripts=comp163440_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32537479	32543510	.	-	.	ID=comp163440_c3_seq1.mrna1;geneID=comp163440_c3_seq1.path1;Name=comp163440_c3_seq1;Dir=sensecoverage=99.8;identity=99.7;matches=3072;mismatches=9;indels=0;unknowns=0;locus=RLOC_00016132
Chr2	stalkie_big_nohaplotig	exon	32537479	32538270	99	-	.	Parent=comp163440_c3_seq1.mrna1;Target=comp163440_c3_seq1 2297 3088 +
Chr2	stalkie_big_nohaplotig	exon	32538336	32538449	100	-	.	Parent=comp163440_c3_seq1.mrna1;Target=comp163440_c3_seq1 2183 2296 +
Chr2	stalkie_big_nohaplotig	exon	32538578	32538661	100	-	.	Parent=comp163440_c3_seq1.mrna1;Target=comp163440_c3_seq1 2099 2182 +
Chr2	stalkie_big_nohaplotig	exon	32538724	32538813	98	-	.	Parent=comp163440_c3_seq1.mrna1;Target=comp163440_c3_seq1 2009 2098 +
Chr2	stalkie_big_nohaplotig	exon	32538874	32538990	100	-	.	Parent=comp163440_c3_seq1.mrna1;Target=comp163440_c3_seq1 1892 2008 +
Chr2	stalkie_big_nohaplotig	exon	32539047	32539139	100	-	.	Parent=comp163440_c3_seq1.mrna1;Target=comp163440_c3_seq1 1799 1891 +
Chr2	stalkie_big_nohaplotig	exon	32539202	32539330	99	-	.	Parent=comp163440_c3_seq1.mrna1;Target=comp163440_c3_seq1 1670 1798 +
Chr2	stalkie_big_nohaplotig	exon	32539691	32540612	99	-	.	Parent=comp163440_c3_seq1.mrna1;Target=comp163440_c3_seq1 748 1669 +
Chr2	stalkie_big_nohaplotig	exon	32541714	32542078	99	-	.	Parent=comp163440_c3_seq1.mrna1;Target=comp163440_c3_seq1 383 747 +
Chr2	stalkie_big_nohaplotig	exon	32542142	32542437	100	-	.	Parent=comp163440_c3_seq1.mrna1;Target=comp163440_c3_seq1 87 382 +
Chr2	stalkie_big_nohaplotig	exon	32543432	32543510	98	-	.	Parent=comp163440_c3_seq1.mrna1;Target=comp163440_c3_seq1 8 86 +
Chr2	stalkie_big_nohaplotig	CDS	32537633	32538270	.	-	2	Parent=comp163440_c3_seq1.mrna1;Target=comp163440_c3_seq1 2297 2934 +
Chr2	stalkie_big_nohaplotig	CDS	32538336	32538449	.	-	2	Parent=comp163440_c3_seq1.mrna1;Target=comp163440_c3_seq1 2183 2296 +
Chr2	stalkie_big_nohaplotig	CDS	32538578	32538661	.	-	2	Parent=comp163440_c3_seq1.mrna1;Target=comp163440_c3_seq1 2099 2182 +
Chr2	stalkie_big_nohaplotig	CDS	32538724	32538813	.	-	2	Parent=comp163440_c3_seq1.mrna1;Target=comp163440_c3_seq1 2009 2098 +
Chr2	stalkie_big_nohaplotig	CDS	32538874	32538990	.	-	2	Parent=comp163440_c3_seq1.mrna1;Target=comp163440_c3_seq1 1892 2008 +
Chr2	stalkie_big_nohaplotig	CDS	32539047	32539139	.	-	2	Parent=comp163440_c3_seq1.mrna1;Target=comp163440_c3_seq1 1799 1891 +
Chr2	stalkie_big_nohaplotig	CDS	32539202	32539330	.	-	2	Parent=comp163440_c3_seq1.mrna1;Target=comp163440_c3_seq1 1670 1798 +
Chr2	stalkie_big_nohaplotig	CDS	32539691	32540612	.	-	0	Parent=comp163440_c3_seq1.mrna1;Target=comp163440_c3_seq1 748 1669 +
Chr2	stalkie_big_nohaplotig	CDS	32541714	32542078	.	-	2	Parent=comp163440_c3_seq1.mrna1;Target=comp163440_c3_seq1 383 747 +
Chr2	stalkie_big_nohaplotig	CDS	32542142	32542307	.	-	0	Parent=comp163440_c3_seq1.mrna1;Target=comp163440_c3_seq1 217 382 +
Chr2	gffcl	locus	32553977	32554873	.	+	.	ID=RLOC_00016133;geneIDs=FBgn0035007.1.path1;transcripts=FBgn0035007.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32553977	32554873	.	+	.	ID=FBgn0035007.1.mrna1;geneID=FBgn0035007.1.path1;Name=FBgn0035007.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=892;mismatches=5;indels=0;unknowns=0;Target=FBgn0035007.1 897 1 .;locus=RLOC_00016133
Chr2	stalkie_big_nohaplotig	exon	32553977	32554873	99	+	.	Parent=FBgn0035007.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	32553977	32554873	.	+	0	Parent=FBgn0035007.1.mrna1
Chr2	gffcl	locus	32594268	32595665	.	+	.	ID=RLOC_00016134;geneIDs=ORF838.path1;transcripts=ORF838.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32594268	32595665	.	+	.	ID=ORF838.mrna1;geneID=ORF838.path1;Name=ORF838;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1393;mismatches=5;indels=0;unknowns=0;Target=ORF838 1398 1 .;locus=RLOC_00016134
Chr2	stalkie_big_nohaplotig	exon	32594268	32595665	99	+	.	Parent=ORF838.mrna1
Chr2	stalkie_big_nohaplotig	CDS	32594268	32595665	.	+	0	Parent=ORF838.mrna1
Chr2	gffcl	locus	32638220	32640063	.	-	.	ID=RLOC_00016135;geneIDs=comp157147_c0_seq1.path1;transcripts=comp157147_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32638220	32640063	.	-	.	ID=comp157147_c0_seq1.mrna1;geneID=comp157147_c0_seq1.path1;Name=comp157147_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=779;mismatches=17;indels=3;unknowns=0;Target=comp157147_c0_seq1 54 1 .;locus=RLOC_00016135
Chr2	stalkie_big_nohaplotig	exon	32638220	32638256	100	-	.	Parent=comp157147_c0_seq1.mrna1;Target=comp157147_c0_seq1 798 762 .
Chr2	stalkie_big_nohaplotig	exon	32638366	32638548	98	-	.	Parent=comp157147_c0_seq1.mrna1;Target=comp157147_c0_seq1 761 579 .
Chr2	stalkie_big_nohaplotig	exon	32638623	32638718	98	-	.	Parent=comp157147_c0_seq1.mrna1;Target=comp157147_c0_seq1 578 483 .
Chr2	stalkie_big_nohaplotig	exon	32638791	32638915	97	-	.	Parent=comp157147_c0_seq1.mrna1;Target=comp157147_c0_seq1 482 358 .
Chr2	stalkie_big_nohaplotig	exon	32638965	32639007	95	-	.	Parent=comp157147_c0_seq1.mrna1;Target=comp157147_c0_seq1 357 315 .
Chr2	stalkie_big_nohaplotig	exon	32639751	32640063	96	-	.	Parent=comp157147_c0_seq1.mrna1;Target=comp157147_c0_seq1 314 1 .
Chr2	stalkie_big_nohaplotig	CDS	32640010	32640063	.	-	0	Parent=comp157147_c0_seq1.mrna1
Chr2	gffcl	locus	32682124	33232192	.	+	.	ID=RLOC_00016136;geneIDs=FBgn0086604.1.path1,FBgn0086604.1.path2,comp162610_c0_seq1.path1;transcripts=comp162610_c0_seq1.mrna1,FBgn0086604.1.mrna1,FBgn0086604.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	32682124	32874148	.	+	.	ID=comp162610_c0_seq1.mrna1;geneID=comp162610_c0_seq1.path1;Name=comp162610_c0_seq1;Dir=sensecoverage=100.0;identity=96.9;matches=3498;mismatches=59;indels=52;unknowns=0;locus=RLOC_00016136
Chr2	stalkie_big_nohaplotig	exon	32682124	32682325	100	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 1 202 +
Chr2	stalkie_big_nohaplotig	exon	32692258	32692637	98	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 203 584 +
Chr2	stalkie_big_nohaplotig	exon	32701941	32701960	100	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 585 604 +
Chr2	stalkie_big_nohaplotig	exon	32763070	32763071	7	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 777 804 +
Chr2	stalkie_big_nohaplotig	exon	32778079	32778088	100	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 815 824 +
Chr2	stalkie_big_nohaplotig	exon	32784130	32784138	100	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 952 960 +
Chr2	stalkie_big_nohaplotig	exon	32784918	32784928	81	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 961 971 +
Chr2	stalkie_big_nohaplotig	exon	32787080	32787130	50	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 972 1027 +
Chr2	stalkie_big_nohaplotig	exon	32791803	32791813	100	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 1091 1101 +
Chr2	stalkie_big_nohaplotig	exon	32791817	32791824	100	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 1148 1155 +
Chr2	stalkie_big_nohaplotig	exon	32793224	32793233	100	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 1487 1496 +
Chr2	stalkie_big_nohaplotig	exon	32824981	32825010	66	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 1546 1575 +
Chr2	stalkie_big_nohaplotig	exon	32842341	32842379	51	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 1612 1665 +
Chr2	stalkie_big_nohaplotig	exon	32846257	32846270	85	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 1666 1679 +
Chr2	stalkie_big_nohaplotig	exon	32852953	32852960	75	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 1680 1687 +
Chr2	stalkie_big_nohaplotig	exon	32855916	32856075	100	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 1688 1847 +
Chr2	stalkie_big_nohaplotig	exon	32858741	32858955	100	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 1848 2062 +
Chr2	stalkie_big_nohaplotig	exon	32859336	32859417	100	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 2063 2144 +
Chr2	stalkie_big_nohaplotig	exon	32864150	32864580	100	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 2145 2575 +
Chr2	stalkie_big_nohaplotig	exon	32864911	32865018	100	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 2576 2683 +
Chr2	stalkie_big_nohaplotig	exon	32865213	32865524	100	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 2684 2995 +
Chr2	stalkie_big_nohaplotig	exon	32865634	32865905	100	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 2996 3267 +
Chr2	stalkie_big_nohaplotig	exon	32868980	32869105	100	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 3268 3393 +
Chr2	stalkie_big_nohaplotig	exon	32870980	32871369	99	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 3394 3783 +
Chr2	stalkie_big_nohaplotig	exon	32873496	32874148	98	+	.	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 3784 4438 +
Chr2	stalkie_big_nohaplotig	CDS	32865410	32865524	.	+	0	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 2881 2995 +
Chr2	stalkie_big_nohaplotig	CDS	32865634	32865905	.	+	2	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 2996 3267 +
Chr2	stalkie_big_nohaplotig	CDS	32868980	32869105	.	+	0	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 3268 3393 +
Chr2	stalkie_big_nohaplotig	CDS	32870980	32871369	.	+	0	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 3394 3783 +
Chr2	stalkie_big_nohaplotig	CDS	32873496	32873603	.	+	0	Parent=comp162610_c0_seq1.mrna1;Target=comp162610_c0_seq1 3784 3891 +
Chr2	stalkie_big_nohaplotig	mRNA	32692499	33232192	.	+	.	ID=FBgn0086604.1.mrna1;geneID=FBgn0086604.1.path1;Name=FBgn0086604.1;Dir=sensecoverage=42.8;identity=99.8;matches=1222;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016136
Chr2	stalkie_big_nohaplotig	exon	32692499	32692637	100	+	.	Parent=FBgn0086604.1.mrna1;Target=FBgn0086604.1 1 139 +
Chr2	stalkie_big_nohaplotig	exon	33215851	33215983	100	+	.	Parent=FBgn0086604.1.mrna1;Target=FBgn0086604.1 140 272 +
Chr2	stalkie_big_nohaplotig	exon	33217224	33217429	100	+	.	Parent=FBgn0086604.1.mrna1;Target=FBgn0086604.1 273 478 +
Chr2	stalkie_big_nohaplotig	exon	33219395	33219508	100	+	.	Parent=FBgn0086604.1.mrna1;Target=FBgn0086604.1 479 592 +
Chr2	stalkie_big_nohaplotig	exon	33221006	33221209	100	+	.	Parent=FBgn0086604.1.mrna1;Target=FBgn0086604.1 593 796 +
Chr2	stalkie_big_nohaplotig	exon	33224607	33224758	98	+	.	Parent=FBgn0086604.1.mrna1;Target=FBgn0086604.1 797 948 +
Chr2	stalkie_big_nohaplotig	exon	33226225	33226369	100	+	.	Parent=FBgn0086604.1.mrna1;Target=FBgn0086604.1 949 1093 +
Chr2	stalkie_big_nohaplotig	exon	33232062	33232192	100	+	.	Parent=FBgn0086604.1.mrna1;Target=FBgn0086604.1 1094 1224 +
Chr2	stalkie_big_nohaplotig	CDS	32692499	32692637	.	+	0	Parent=FBgn0086604.1.mrna1;Target=FBgn0086604.1 1 139 +
Chr2	stalkie_big_nohaplotig	CDS	33215851	33215983	.	+	2	Parent=FBgn0086604.1.mrna1;Target=FBgn0086604.1 140 272 +
Chr2	stalkie_big_nohaplotig	CDS	33217224	33217429	.	+	1	Parent=FBgn0086604.1.mrna1;Target=FBgn0086604.1 273 478 +
Chr2	stalkie_big_nohaplotig	CDS	33219395	33219508	.	+	2	Parent=FBgn0086604.1.mrna1;Target=FBgn0086604.1 479 592 +
Chr2	stalkie_big_nohaplotig	CDS	33221006	33221209	.	+	2	Parent=FBgn0086604.1.mrna1;Target=FBgn0086604.1 593 796 +
Chr2	stalkie_big_nohaplotig	CDS	33224607	33224758	.	+	2	Parent=FBgn0086604.1.mrna1;Target=FBgn0086604.1 797 948 +
Chr2	stalkie_big_nohaplotig	CDS	33226225	33226369	.	+	0	Parent=FBgn0086604.1.mrna1;Target=FBgn0086604.1 949 1093 +
Chr2	stalkie_big_nohaplotig	CDS	33232062	33232192	.	+	2	Parent=FBgn0086604.1.mrna1;Target=FBgn0086604.1 1094 1224 +
Chr2	stalkie_big_nohaplotig	mRNA	32855916	32869168	.	+	.	ID=FBgn0086604.1.mrna2;geneID=FBgn0086604.1.path2;Name=FBgn0086604.1;Dir=sensecoverage=57.2;identity=100.0;matches=1635;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016136
Chr2	stalkie_big_nohaplotig	exon	32855916	32856075	100	+	.	Parent=FBgn0086604.1.mrna2;Target=FBgn0086604.1 1225 1384 +
Chr2	stalkie_big_nohaplotig	exon	32858741	32858955	100	+	.	Parent=FBgn0086604.1.mrna2;Target=FBgn0086604.1 1385 1599 +
Chr2	stalkie_big_nohaplotig	exon	32859336	32859417	100	+	.	Parent=FBgn0086604.1.mrna2;Target=FBgn0086604.1 1600 1681 +
Chr2	stalkie_big_nohaplotig	exon	32864150	32864309	100	+	.	Parent=FBgn0086604.1.mrna2;Target=FBgn0086604.1 1682 1841 +
Chr2	stalkie_big_nohaplotig	exon	32864444	32864580	100	+	.	Parent=FBgn0086604.1.mrna2;Target=FBgn0086604.1 1842 1978 +
Chr2	stalkie_big_nohaplotig	exon	32864911	32865018	100	+	.	Parent=FBgn0086604.1.mrna2;Target=FBgn0086604.1 1979 2086 +
Chr2	stalkie_big_nohaplotig	exon	32865213	32865524	100	+	.	Parent=FBgn0086604.1.mrna2;Target=FBgn0086604.1 2087 2398 +
Chr2	stalkie_big_nohaplotig	exon	32865634	32865905	100	+	.	Parent=FBgn0086604.1.mrna2;Target=FBgn0086604.1 2399 2670 +
Chr2	stalkie_big_nohaplotig	exon	32868980	32869168	100	+	.	Parent=FBgn0086604.1.mrna2;Target=FBgn0086604.1 2671 2859 +
Chr2	stalkie_big_nohaplotig	CDS	32855916	32856075	.	+	0	Parent=FBgn0086604.1.mrna2;Target=FBgn0086604.1 1225 1384 +
Chr2	stalkie_big_nohaplotig	CDS	32858741	32858955	.	+	2	Parent=FBgn0086604.1.mrna2;Target=FBgn0086604.1 1385 1599 +
Chr2	stalkie_big_nohaplotig	CDS	32859336	32859417	.	+	0	Parent=FBgn0086604.1.mrna2;Target=FBgn0086604.1 1600 1681 +
Chr2	stalkie_big_nohaplotig	CDS	32864150	32864309	.	+	2	Parent=FBgn0086604.1.mrna2;Target=FBgn0086604.1 1682 1841 +
Chr2	stalkie_big_nohaplotig	CDS	32864444	32864580	.	+	1	Parent=FBgn0086604.1.mrna2;Target=FBgn0086604.1 1842 1978 +
Chr2	stalkie_big_nohaplotig	CDS	32864911	32865018	.	+	2	Parent=FBgn0086604.1.mrna2;Target=FBgn0086604.1 1979 2086 +
Chr2	stalkie_big_nohaplotig	CDS	32865213	32865524	.	+	2	Parent=FBgn0086604.1.mrna2;Target=FBgn0086604.1 2087 2398 +
Chr2	stalkie_big_nohaplotig	CDS	32865634	32865905	.	+	2	Parent=FBgn0086604.1.mrna2;Target=FBgn0086604.1 2399 2670 +
Chr2	stalkie_big_nohaplotig	CDS	32868980	32869168	.	+	0	Parent=FBgn0086604.1.mrna2;Target=FBgn0086604.1 2671 2859 +
Chr2	gffcl	locus	32722798	32723825	.	-	.	ID=RLOC_00016137;geneIDs=comp155884_c0_seq1.path1;transcripts=comp155884_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32722798	32723825	.	-	.	ID=comp155884_c0_seq1.mrna1;geneID=comp155884_c0_seq1.path1;Name=comp155884_c0_seq1;Dir=antisensecoverage=100.0;identity=97.9;matches=901;mismatches=4;indels=15;unknowns=0;locus=RLOC_00016137
Chr2	stalkie_big_nohaplotig	exon	32722798	32723167	100	-	.	Parent=comp155884_c0_seq1.mrna1;Target=comp155884_c0_seq1 1 370 -
Chr2	stalkie_big_nohaplotig	exon	32723233	32723554	95	-	.	Parent=comp155884_c0_seq1.mrna1;Target=comp155884_c0_seq1 371 704 -
Chr2	stalkie_big_nohaplotig	exon	32723613	32723825	98	-	.	Parent=comp155884_c0_seq1.mrna1;Target=comp155884_c0_seq1 705 920 -
Chr2	stalkie_big_nohaplotig	CDS	32723063	32723167	.	-	0	Parent=comp155884_c0_seq1.mrna1;Target=comp155884_c0_seq1 266 370 .
Chr2	stalkie_big_nohaplotig	CDS	32723233	32723554	.	-	1	Parent=comp155884_c0_seq1.mrna1;Target=comp155884_c0_seq1 371 704 .
Chr2	stalkie_big_nohaplotig	CDS	32723613	32723824	.	-	0	Parent=comp155884_c0_seq1.mrna1;Target=comp155884_c0_seq1 705 919 .
Chr2	gffcl	locus	32758083	34695372	.	+	.	ID=RLOC_00016138;geneIDs=comp155340_c0_seq1.path1;transcripts=comp155340_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32758083	34695372	.	+	.	ID=comp155340_c0_seq1.mrna1;geneID=comp155340_c0_seq1.path1;Name=comp155340_c0_seq1;Dir=antisensecoverage=83.4;identity=99.4;matches=1023;mismatches=5;indels=1;unknowns=0;locus=RLOC_00016138
Chr2	stalkie_big_nohaplotig	exon	32758083	32758087	100	+	.	Parent=comp155340_c0_seq1.mrna1;Target=comp155340_c0_seq1 1024 1028 -
Chr2	stalkie_big_nohaplotig	exon	32764036	32764045	100	+	.	Parent=comp155340_c0_seq1.mrna1;Target=comp155340_c0_seq1 1014 1023 -
Chr2	stalkie_big_nohaplotig	exon	32769837	32769841	100	+	.	Parent=comp155340_c0_seq1.mrna1;Target=comp155340_c0_seq1 1009 1013 -
Chr2	stalkie_big_nohaplotig	exon	34693984	34694253	99	+	.	Parent=comp155340_c0_seq1.mrna1;Target=comp155340_c0_seq1 739 1008 -
Chr2	stalkie_big_nohaplotig	exon	34694312	34694462	99	+	.	Parent=comp155340_c0_seq1.mrna1;Target=comp155340_c0_seq1 588 738 -
Chr2	stalkie_big_nohaplotig	exon	34694657	34694813	100	+	.	Parent=comp155340_c0_seq1.mrna1;Target=comp155340_c0_seq1 431 587 -
Chr2	stalkie_big_nohaplotig	exon	34694886	34694985	100	+	.	Parent=comp155340_c0_seq1.mrna1;Target=comp155340_c0_seq1 331 430 -
Chr2	stalkie_big_nohaplotig	exon	34695042	34695372	98	+	.	Parent=comp155340_c0_seq1.mrna1;Target=comp155340_c0_seq1 1 330 -
Chr2	stalkie_big_nohaplotig	CDS	34694251	34694253	.	+	0	Parent=comp155340_c0_seq1.mrna1;Target=comp155340_c0_seq1 739 741 .
Chr2	stalkie_big_nohaplotig	CDS	34694312	34694462	.	+	0	Parent=comp155340_c0_seq1.mrna1;Target=comp155340_c0_seq1 588 738 .
Chr2	stalkie_big_nohaplotig	CDS	34694657	34694813	.	+	2	Parent=comp155340_c0_seq1.mrna1;Target=comp155340_c0_seq1 431 587 .
Chr2	stalkie_big_nohaplotig	CDS	34694886	34694985	.	+	1	Parent=comp155340_c0_seq1.mrna1;Target=comp155340_c0_seq1 331 430 .
Chr2	stalkie_big_nohaplotig	CDS	34695042	34695275	.	+	0	Parent=comp155340_c0_seq1.mrna1;Target=comp155340_c0_seq1 97 330 .
Chr2	gffcl	locus	32825992	32827902	.	+	.	ID=RLOC_00016139;geneIDs=FBgn0034506.2.path1;transcripts=FBgn0034506.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32825992	32827902	.	+	.	ID=FBgn0034506.2.mrna1;geneID=FBgn0034506.2.path1;Name=FBgn0034506.2;Dir=sensecoverage=100.0;identity=99.5;matches=1570;mismatches=8;indels=0;unknowns=0;locus=RLOC_00016139
Chr2	stalkie_big_nohaplotig	exon	32825992	32826094	100	+	.	Parent=FBgn0034506.2.mrna1;Target=FBgn0034506.2 1 103 +
Chr2	stalkie_big_nohaplotig	exon	32826165	32826251	98	+	.	Parent=FBgn0034506.2.mrna1;Target=FBgn0034506.2 104 190 +
Chr2	stalkie_big_nohaplotig	exon	32826319	32826636	99	+	.	Parent=FBgn0034506.2.mrna1;Target=FBgn0034506.2 191 508 +
Chr2	stalkie_big_nohaplotig	exon	32826770	32826887	100	+	.	Parent=FBgn0034506.2.mrna1;Target=FBgn0034506.2 509 626 +
Chr2	stalkie_big_nohaplotig	exon	32826951	32827902	99	+	.	Parent=FBgn0034506.2.mrna1;Target=FBgn0034506.2 627 1578 +
Chr2	stalkie_big_nohaplotig	CDS	32825992	32826094	.	+	0	Parent=FBgn0034506.2.mrna1;Target=FBgn0034506.2 1 103 +
Chr2	stalkie_big_nohaplotig	CDS	32826165	32826251	.	+	2	Parent=FBgn0034506.2.mrna1;Target=FBgn0034506.2 104 190 +
Chr2	stalkie_big_nohaplotig	CDS	32826319	32826636	.	+	2	Parent=FBgn0034506.2.mrna1;Target=FBgn0034506.2 191 508 +
Chr2	stalkie_big_nohaplotig	CDS	32826770	32826887	.	+	2	Parent=FBgn0034506.2.mrna1;Target=FBgn0034506.2 509 626 +
Chr2	stalkie_big_nohaplotig	CDS	32826951	32827902	.	+	1	Parent=FBgn0034506.2.mrna1;Target=FBgn0034506.2 627 1578 +
Chr2	gffcl	locus	32830840	32832534	.	-	.	ID=RLOC_00016140;geneIDs=FBgn0023175.2.path2;transcripts=FBgn0023175.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	32830840	32832534	.	-	.	ID=FBgn0023175.2.mrna2;geneID=FBgn0023175.2.path2;Name=FBgn0023175.2;Dir=sensecoverage=98.1;identity=94.1;matches=933;mismatches=55;indels=4;unknowns=0;Target=FBgn0023175.2 3 77 +;locus=RLOC_00016140
Chr2	stalkie_big_nohaplotig	exon	32830840	32830927	85	-	.	Parent=FBgn0023175.2.mrna2;Target=FBgn0023175.2 903 993 +
Chr2	stalkie_big_nohaplotig	exon	32831030	32831257	94	-	.	Parent=FBgn0023175.2.mrna2;Target=FBgn0023175.2 675 902 +
Chr2	stalkie_big_nohaplotig	exon	32831336	32831910	94	-	.	Parent=FBgn0023175.2.mrna2;Target=FBgn0023175.2 100 674 +
Chr2	stalkie_big_nohaplotig	exon	32832438	32832534	95	-	.	Parent=FBgn0023175.2.mrna2;Target=FBgn0023175.2 2 99 +
Chr2	stalkie_big_nohaplotig	CDS	32832460	32832533	.	-	0	Parent=FBgn0023175.2.mrna2
Chr2	gffcl	locus	32876234	32877224	.	-	.	ID=RLOC_00016141;geneIDs=ORF2391.path1;transcripts=ORF2391.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32876234	32877224	.	-	.	ID=ORF2391.mrna1;geneID=ORF2391.path1;Name=ORF2391;Dir=sensecoverage=100.0;identity=99.5;matches=863;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016141
Chr2	stalkie_big_nohaplotig	exon	32876234	32876363	100	-	.	Parent=ORF2391.mrna1;Target=ORF2391 738 867 +
Chr2	stalkie_big_nohaplotig	exon	32876423	32876545	97	-	.	Parent=ORF2391.mrna1;Target=ORF2391 615 737 +
Chr2	stalkie_big_nohaplotig	exon	32876611	32877224	99	-	.	Parent=ORF2391.mrna1;Target=ORF2391 1 614 +
Chr2	stalkie_big_nohaplotig	CDS	32876234	32876363	.	-	1	Parent=ORF2391.mrna1;Target=ORF2391 738 867 +
Chr2	stalkie_big_nohaplotig	CDS	32876423	32876545	.	-	1	Parent=ORF2391.mrna1;Target=ORF2391 615 737 +
Chr2	stalkie_big_nohaplotig	CDS	32876611	32877224	.	-	0	Parent=ORF2391.mrna1;Target=ORF2391 1 614 +
Chr2	gffcl	locus	32905576	32906367	.	+	.	ID=RLOC_00016142;geneIDs=FBgn0033699.2.path1;transcripts=FBgn0033699.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32905576	32906367	.	+	.	ID=FBgn0033699.2.mrna1;geneID=FBgn0033699.2.path1;Name=FBgn0033699.2;Dir=sensecoverage=100.0;identity=99.4;matches=519;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016142
Chr2	stalkie_big_nohaplotig	exon	32905576	32905644	100	+	.	Parent=FBgn0033699.2.mrna1;Target=FBgn0033699.2 1 69 +
Chr2	stalkie_big_nohaplotig	exon	32905779	32905901	99	+	.	Parent=FBgn0033699.2.mrna1;Target=FBgn0033699.2 70 192 +
Chr2	stalkie_big_nohaplotig	exon	32905957	32906162	99	+	.	Parent=FBgn0033699.2.mrna1;Target=FBgn0033699.2 193 398 +
Chr2	stalkie_big_nohaplotig	exon	32906244	32906367	99	+	.	Parent=FBgn0033699.2.mrna1;Target=FBgn0033699.2 399 522 +
Chr2	stalkie_big_nohaplotig	CDS	32905576	32905644	.	+	0	Parent=FBgn0033699.2.mrna1;Target=FBgn0033699.2 1 69 +
Chr2	stalkie_big_nohaplotig	CDS	32905779	32905901	.	+	0	Parent=FBgn0033699.2.mrna1;Target=FBgn0033699.2 70 192 +
Chr2	stalkie_big_nohaplotig	CDS	32905957	32906162	.	+	0	Parent=FBgn0033699.2.mrna1;Target=FBgn0033699.2 193 398 +
Chr2	stalkie_big_nohaplotig	CDS	32906244	32906367	.	+	1	Parent=FBgn0033699.2.mrna1;Target=FBgn0033699.2 399 522 +
Chr2	gffcl	locus	32908847	32911982	.	-	.	ID=RLOC_00016143;geneIDs=FBgn0027872.1.path1;transcripts=FBgn0027872.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32908847	32911982	.	-	.	ID=FBgn0027872.1.mrna1;geneID=FBgn0027872.1.path1;Name=FBgn0027872.1;Dir=sensecoverage=100.0;identity=100.0;matches=864;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016143
Chr2	stalkie_big_nohaplotig	exon	32908847	32909338	100	-	.	Parent=FBgn0027872.1.mrna1;Target=FBgn0027872.1 373 864 +
Chr2	stalkie_big_nohaplotig	exon	32909403	32909474	100	-	.	Parent=FBgn0027872.1.mrna1;Target=FBgn0027872.1 301 372 +
Chr2	stalkie_big_nohaplotig	exon	32909541	32909548	100	-	.	Parent=FBgn0027872.1.mrna1;Target=FBgn0027872.1 293 300 +
Chr2	stalkie_big_nohaplotig	exon	32911086	32911174	100	-	.	Parent=FBgn0027872.1.mrna1;Target=FBgn0027872.1 204 292 +
Chr2	stalkie_big_nohaplotig	exon	32911713	32911861	100	-	.	Parent=FBgn0027872.1.mrna1;Target=FBgn0027872.1 55 203 +
Chr2	stalkie_big_nohaplotig	exon	32911929	32911982	100	-	.	Parent=FBgn0027872.1.mrna1;Target=FBgn0027872.1 1 54 +
Chr2	stalkie_big_nohaplotig	CDS	32908847	32909338	.	-	0	Parent=FBgn0027872.1.mrna1;Target=FBgn0027872.1 373 864 +
Chr2	stalkie_big_nohaplotig	CDS	32909403	32909474	.	-	0	Parent=FBgn0027872.1.mrna1;Target=FBgn0027872.1 301 372 +
Chr2	stalkie_big_nohaplotig	CDS	32909541	32909548	.	-	2	Parent=FBgn0027872.1.mrna1;Target=FBgn0027872.1 293 300 +
Chr2	stalkie_big_nohaplotig	CDS	32911086	32911174	.	-	1	Parent=FBgn0027872.1.mrna1;Target=FBgn0027872.1 204 292 +
Chr2	stalkie_big_nohaplotig	CDS	32911713	32911861	.	-	0	Parent=FBgn0027872.1.mrna1;Target=FBgn0027872.1 55 203 +
Chr2	stalkie_big_nohaplotig	CDS	32911929	32911982	.	-	0	Parent=FBgn0027872.1.mrna1;Target=FBgn0027872.1 1 54 +
Chr2	gffcl	locus	32936917	32937566	.	+	.	ID=RLOC_00016145;geneIDs=FBgn0043575.3.path1;transcripts=FBgn0043575.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32936917	32937566	.	+	.	ID=FBgn0043575.3.mrna1;geneID=FBgn0043575.3.path1;Name=FBgn0043575.3;Dir=sensecoverage=100.0;identity=99.1;matches=583;mismatches=5;indels=0;unknowns=0;locus=RLOC_00016145
Chr2	stalkie_big_nohaplotig	exon	32936917	32937328	98	+	.	Parent=FBgn0043575.3.mrna1;Target=FBgn0043575.3 1 412 +
Chr2	stalkie_big_nohaplotig	exon	32937391	32937566	100	+	.	Parent=FBgn0043575.3.mrna1;Target=FBgn0043575.3 413 588 +
Chr2	stalkie_big_nohaplotig	CDS	32936917	32937328	.	+	0	Parent=FBgn0043575.3.mrna1;Target=FBgn0043575.3 1 412 +
Chr2	stalkie_big_nohaplotig	CDS	32937391	32937566	.	+	2	Parent=FBgn0043575.3.mrna1;Target=FBgn0043575.3 413 588 +
Chr2	gffcl	locus	32942869	32943599	.	+	.	ID=RLOC_00016146;geneIDs=FBgn0043575.2.path1;transcripts=FBgn0043575.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32942869	32943599	.	+	.	ID=FBgn0043575.2.mrna1;geneID=FBgn0043575.2.path1;Name=FBgn0043575.2;Dir=sensecoverage=100.0;identity=99.5;matches=642;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016146
Chr2	stalkie_big_nohaplotig	exon	32942869	32943337	99	+	.	Parent=FBgn0043575.2.mrna1;Target=FBgn0043575.2 1 469 +
Chr2	stalkie_big_nohaplotig	exon	32943424	32943599	100	+	.	Parent=FBgn0043575.2.mrna1;Target=FBgn0043575.2 470 645 +
Chr2	stalkie_big_nohaplotig	CDS	32942869	32943337	.	+	0	Parent=FBgn0043575.2.mrna1;Target=FBgn0043575.2 1 469 +
Chr2	stalkie_big_nohaplotig	CDS	32943424	32943599	.	+	2	Parent=FBgn0043575.2.mrna1;Target=FBgn0043575.2 470 645 +
Chr2	gffcl	locus	32974467	32974828	.	-	.	ID=RLOC_00016147;geneIDs=FBgn0085257.1.path1;transcripts=FBgn0085257.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32974467	32974828	.	-	.	ID=FBgn0085257.1.mrna1;geneID=FBgn0085257.1.path1;Name=FBgn0085257.1;Dir=sensecoverage=100.0;identity=100.0;matches=300;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016147
Chr2	stalkie_big_nohaplotig	exon	32974467	32974600	100	-	.	Parent=FBgn0085257.1.mrna1;Target=FBgn0085257.1 167 300 +
Chr2	stalkie_big_nohaplotig	exon	32974663	32974828	100	-	.	Parent=FBgn0085257.1.mrna1;Target=FBgn0085257.1 1 166 +
Chr2	stalkie_big_nohaplotig	CDS	32974467	32974600	.	-	2	Parent=FBgn0085257.1.mrna1;Target=FBgn0085257.1 167 300 +
Chr2	stalkie_big_nohaplotig	CDS	32974663	32974828	.	-	0	Parent=FBgn0085257.1.mrna1;Target=FBgn0085257.1 1 166 +
Chr2	gffcl	locus	32982933	32985830	.	-	.	ID=RLOC_00016148;geneIDs=comp149562_c0_seq1.path1;transcripts=comp149562_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32982933	32985830	.	-	.	ID=comp149562_c0_seq1.mrna1;geneID=comp149562_c0_seq1.path1;Name=comp149562_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1558;mismatches=1;indels=1;unknowns=0;locus=RLOC_00016148
Chr2	stalkie_big_nohaplotig	exon	32982933	32983534	100	-	.	Parent=comp149562_c0_seq1.mrna1;Target=comp149562_c0_seq1 1559 958 .
Chr2	stalkie_big_nohaplotig	exon	32984733	32985408	99	-	.	Parent=comp149562_c0_seq1.mrna1;Target=comp149562_c0_seq1 957 283 .
Chr2	stalkie_big_nohaplotig	exon	32985549	32985830	100	-	.	Parent=comp149562_c0_seq1.mrna1;Target=comp149562_c0_seq1 282 1 .
Chr2	stalkie_big_nohaplotig	CDS	32985263	32985408	.	-	2	Parent=comp149562_c0_seq1.mrna1;Target=comp149562_c0_seq1 428 283 .
Chr2	stalkie_big_nohaplotig	CDS	32985549	32985591	.	-	0	Parent=comp149562_c0_seq1.mrna1;Target=comp149562_c0_seq1 282 240 .
Chr2	gffcl	locus	32995819	33000786	.	+	.	ID=RLOC_00016149;geneIDs=comp154392_c1_seq1.path1;transcripts=comp154392_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	32995819	33000786	.	+	.	ID=comp154392_c1_seq1.mrna1;geneID=comp154392_c1_seq1.path1;Name=comp154392_c1_seq1;Dir=sensecoverage=99.7;identity=98.9;matches=1081;mismatches=8;indels=4;unknowns=0;locus=RLOC_00016149
Chr2	stalkie_big_nohaplotig	exon	32995819	32996021	100	+	.	Parent=comp154392_c1_seq1.mrna1;Target=comp154392_c1_seq1 1 203 +
Chr2	stalkie_big_nohaplotig	exon	32996148	32996301	100	+	.	Parent=comp154392_c1_seq1.mrna1;Target=comp154392_c1_seq1 204 357 +
Chr2	stalkie_big_nohaplotig	exon	32997258	32997480	95	+	.	Parent=comp154392_c1_seq1.mrna1;Target=comp154392_c1_seq1 358 576 +
Chr2	stalkie_big_nohaplotig	exon	32999168	32999296	99	+	.	Parent=comp154392_c1_seq1.mrna1;Target=comp154392_c1_seq1 577 705 +
Chr2	stalkie_big_nohaplotig	exon	32999425	32999577	100	+	.	Parent=comp154392_c1_seq1.mrna1;Target=comp154392_c1_seq1 706 858 +
Chr2	stalkie_big_nohaplotig	exon	33000556	33000786	99	+	.	Parent=comp154392_c1_seq1.mrna1;Target=comp154392_c1_seq1 859 1089 +
Chr2	stalkie_big_nohaplotig	CDS	32995964	32996021	.	+	0	Parent=comp154392_c1_seq1.mrna1;Target=comp154392_c1_seq1 146 203 +
Chr2	stalkie_big_nohaplotig	CDS	32996148	32996301	.	+	2	Parent=comp154392_c1_seq1.mrna1;Target=comp154392_c1_seq1 204 357 +
Chr2	stalkie_big_nohaplotig	CDS	32997258	32997375	.	+	1	Parent=comp154392_c1_seq1.mrna1;Target=comp154392_c1_seq1 358 475 +
Chr2	gffcl	locus	33002165	33003959	.	+	.	ID=RLOC_00016150;geneIDs=comp122107_c0_seq1.path1;transcripts=comp122107_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33002165	33003959	.	+	.	ID=comp122107_c0_seq1.mrna1;geneID=comp122107_c0_seq1.path1;Name=comp122107_c0_seq1;Dir=sensecoverage=89.8;identity=99.8;matches=500;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016150
Chr2	stalkie_big_nohaplotig	exon	33002165	33002332	99	+	.	Parent=comp122107_c0_seq1.mrna1;Target=comp122107_c0_seq1 40 207 +
Chr2	stalkie_big_nohaplotig	exon	33002735	33002847	100	+	.	Parent=comp122107_c0_seq1.mrna1;Target=comp122107_c0_seq1 208 320 +
Chr2	stalkie_big_nohaplotig	exon	33003740	33003959	100	+	.	Parent=comp122107_c0_seq1.mrna1;Target=comp122107_c0_seq1 321 540 +
Chr2	stalkie_big_nohaplotig	CDS	33002738	33002847	.	+	0	Parent=comp122107_c0_seq1.mrna1;Target=comp122107_c0_seq1 211 320 +
Chr2	stalkie_big_nohaplotig	CDS	33003740	33003830	.	+	1	Parent=comp122107_c0_seq1.mrna1;Target=comp122107_c0_seq1 321 411 +
Chr2	gffcl	locus	33042886	33044322	.	-	.	ID=RLOC_00016151;geneIDs=comp161431_c0_seq1.path1;transcripts=comp161431_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33042886	33044322	.	-	.	ID=comp161431_c0_seq1.mrna1;geneID=comp161431_c0_seq1.path1;Name=comp161431_c0_seq1;Dir=antisensecoverage=99.8;identity=98.8;matches=1168;mismatches=14;indels=0;unknowns=0;locus=RLOC_00016151
Chr2	stalkie_big_nohaplotig	exon	33042886	33043526	98	-	.	Parent=comp161431_c0_seq1.mrna1;Target=comp161431_c0_seq1 2 642 -
Chr2	stalkie_big_nohaplotig	exon	33043710	33043997	99	-	.	Parent=comp161431_c0_seq1.mrna1;Target=comp161431_c0_seq1 643 930 -
Chr2	stalkie_big_nohaplotig	exon	33044070	33044322	100	-	.	Parent=comp161431_c0_seq1.mrna1;Target=comp161431_c0_seq1 931 1183 -
Chr2	stalkie_big_nohaplotig	CDS	33042967	33043526	.	-	2	Parent=comp161431_c0_seq1.mrna1;Target=comp161431_c0_seq1 83 642 .
Chr2	stalkie_big_nohaplotig	CDS	33043710	33043997	.	-	2	Parent=comp161431_c0_seq1.mrna1;Target=comp161431_c0_seq1 643 930 .
Chr2	stalkie_big_nohaplotig	CDS	33044070	33044127	.	-	0	Parent=comp161431_c0_seq1.mrna1;Target=comp161431_c0_seq1 931 988 .
Chr2	gffcl	locus	33087679	33087950	.	-	.	ID=RLOC_00016152;geneIDs=comp153760_c0_seq1.path2;transcripts=comp153760_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	33087679	33087950	.	-	.	ID=comp153760_c0_seq1.mrna2;geneID=comp153760_c0_seq1.path2;Name=comp153760_c0_seq1;Dir=indeterminatecoverage=48.7;identity=94.5;matches=257;mismatches=15;indels=0;unknowns=0;Target=comp153760_c0_seq1 557 286 .;CDS_Target=comp153760_c0_seq1 358 287 .;locus=RLOC_00016152
Chr2	stalkie_big_nohaplotig	exon	33087679	33087950	94	-	.	Parent=comp153760_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	33087878	33087949	.	-	0	Parent=comp153760_c0_seq1.mrna2
Chr2	gffcl	locus	33093122	33093494	.	-	.	ID=RLOC_00016153;geneIDs=comp153760_c0_seq1.path1;transcripts=comp153760_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33093122	33093494	.	-	.	ID=comp153760_c0_seq1.mrna1;geneID=comp153760_c0_seq1.path1;Name=comp153760_c0_seq1;Dir=indeterminatecoverage=66.8;identity=98.9;matches=369;mismatches=4;indels=0;unknowns=0;Target=comp153760_c0_seq1 394 22 .;CDS_Target=comp153760_c0_seq1 297 22 .;locus=RLOC_00016153
Chr2	stalkie_big_nohaplotig	exon	33093122	33093494	98	-	.	Parent=comp153760_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	33093219	33093494	.	-	0	Parent=comp153760_c0_seq1.mrna1
Chr2	gffcl	locus	33100300	33100764	.	+	.	ID=RLOC_00016154;geneIDs=comp132857_c1_seq1.path1;transcripts=comp132857_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33100300	33100764	.	+	.	ID=comp132857_c1_seq1.mrna1;geneID=comp132857_c1_seq1.path1;Name=comp132857_c1_seq1;Dir=sensecoverage=99.5;identity=100.0;matches=410;mismatches=0;indels=0;unknowns=0;Target=comp132857_c1_seq1 2 238 +;locus=RLOC_00016154
Chr2	stalkie_big_nohaplotig	exon	33100300	33100546	100	+	.	Parent=comp132857_c1_seq1.mrna1;Target=comp132857_c1_seq1 1 247 +
Chr2	stalkie_big_nohaplotig	exon	33100602	33100764	100	+	.	Parent=comp132857_c1_seq1.mrna1;Target=comp132857_c1_seq1 248 410 +
Chr2	stalkie_big_nohaplotig	CDS	33100301	33100537	.	+	0	Parent=comp132857_c1_seq1.mrna1
Chr2	gffcl	locus	33116284	33119102	.	+	.	ID=RLOC_00016155;geneIDs=comp148966_c0_seq1.path1;transcripts=comp148966_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33116284	33119102	.	+	.	ID=comp148966_c0_seq1.mrna1;geneID=comp148966_c0_seq1.path1;Name=comp148966_c0_seq1;Dir=sensecoverage=99.7;identity=98.0;matches=1018;mismatches=21;indels=0;unknowns=0;locus=RLOC_00016155
Chr2	stalkie_big_nohaplotig	exon	33116284	33117109	97	+	.	Parent=comp148966_c0_seq1.mrna1;Target=comp148966_c0_seq1 2 827 +
Chr2	stalkie_big_nohaplotig	exon	33118890	33119102	98	+	.	Parent=comp148966_c0_seq1.mrna1;Target=comp148966_c0_seq1 828 1040 +
Chr2	stalkie_big_nohaplotig	CDS	33116375	33117109	.	+	0	Parent=comp148966_c0_seq1.mrna1;Target=comp148966_c0_seq1 93 827 +
Chr2	stalkie_big_nohaplotig	CDS	33118890	33119000	.	+	0	Parent=comp148966_c0_seq1.mrna1;Target=comp148966_c0_seq1 828 938 +
Chr2	gffcl	locus	33120492	33120735	.	+	.	ID=RLOC_00016156;geneIDs=comp9215_c0_seq1.path1;transcripts=comp9215_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33120492	33120735	.	+	.	ID=comp9215_c0_seq1.mrna1;geneID=comp9215_c0_seq1.path1;Name=comp9215_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.6;matches=221;mismatches=19;indels=4;unknowns=0;Target=comp9215_c0_seq1 240 1 .;CDS_Target=comp9215_c0_seq1 110 54 .;locus=RLOC_00016156
Chr2	stalkie_big_nohaplotig	exon	33120492	33120735	90	+	.	Parent=comp9215_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	33120545	33120601	.	+	0	Parent=comp9215_c0_seq1.mrna1
Chr2	gffcl	locus	33193925	33194919	.	+	.	ID=RLOC_00016157;geneIDs=comp133792_c0_seq1.path1;transcripts=comp133792_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33193925	33194919	.	+	.	ID=comp133792_c0_seq1.mrna1;geneID=comp133792_c0_seq1.path1;Name=comp133792_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=995;mismatches=0;indels=0;unknowns=0;Target=comp133792_c0_seq1 995 1 .;CDS_Target=comp133792_c0_seq1 449 339 .;locus=RLOC_00016157
Chr2	stalkie_big_nohaplotig	exon	33193925	33194919	100	+	.	Parent=comp133792_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	33194263	33194373	.	+	0	Parent=comp133792_c0_seq1.mrna1
Chr2	gffcl	locus	33201534	33202552	.	+	.	ID=RLOC_00016158;geneIDs=FBgn0052463.1.path1;transcripts=FBgn0052463.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33201534	33202552	.	+	.	ID=FBgn0052463.1.mrna1;geneID=FBgn0052463.1.path1;Name=FBgn0052463.1;Dir=sensecoverage=100.0;identity=99.9;matches=962;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016158
Chr2	stalkie_big_nohaplotig	exon	33201534	33201704	99	+	.	Parent=FBgn0052463.1.mrna1;Target=FBgn0052463.1 1 171 +
Chr2	stalkie_big_nohaplotig	exon	33201761	33202552	100	+	.	Parent=FBgn0052463.1.mrna1;Target=FBgn0052463.1 172 963 +
Chr2	stalkie_big_nohaplotig	CDS	33201534	33201704	.	+	0	Parent=FBgn0052463.1.mrna1;Target=FBgn0052463.1 1 171 +
Chr2	stalkie_big_nohaplotig	CDS	33201761	33202552	.	+	0	Parent=FBgn0052463.1.mrna1;Target=FBgn0052463.1 172 963 +
Chr2	gffcl	locus	33239530	33240589	.	+	.	ID=RLOC_00016159;geneIDs=comp158991_c0_seq1.path1;transcripts=comp158991_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33239530	33240589	.	+	.	ID=comp158991_c0_seq1.mrna1;geneID=comp158991_c0_seq1.path1;Name=comp158991_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.8;matches=1059;mismatches=1;indels=1;unknowns=0;Target=comp158991_c0_seq1 1062 2 .;CDS_Target=comp158991_c0_seq1 343 179 .;locus=RLOC_00016159
Chr2	stalkie_big_nohaplotig	exon	33239530	33240589	99	+	.	Parent=comp158991_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	33239707	33239871	.	+	0	Parent=comp158991_c0_seq1.mrna1
Chr2	gffcl	locus	33276999	33278757	.	+	.	ID=RLOC_00016160;geneIDs=FBgn0028903.1.path1;transcripts=FBgn0028903.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33276999	33278757	.	+	.	ID=FBgn0028903.1.mrna1;geneID=FBgn0028903.1.path1;Name=FBgn0028903.1;Dir=sensecoverage=100.0;identity=99.8;matches=1461;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016160
Chr2	stalkie_big_nohaplotig	exon	33276999	33277245	99	+	.	Parent=FBgn0028903.1.mrna1;Target=FBgn0028903.1 1 247 +
Chr2	stalkie_big_nohaplotig	exon	33277301	33277827	99	+	.	Parent=FBgn0028903.1.mrna1;Target=FBgn0028903.1 248 774 +
Chr2	stalkie_big_nohaplotig	exon	33277894	33278110	100	+	.	Parent=FBgn0028903.1.mrna1;Target=FBgn0028903.1 775 991 +
Chr2	stalkie_big_nohaplotig	exon	33278285	33278757	99	+	.	Parent=FBgn0028903.1.mrna1;Target=FBgn0028903.1 992 1464 +
Chr2	stalkie_big_nohaplotig	CDS	33276999	33277245	.	+	0	Parent=FBgn0028903.1.mrna1;Target=FBgn0028903.1 1 247 +
Chr2	stalkie_big_nohaplotig	CDS	33277301	33277827	.	+	2	Parent=FBgn0028903.1.mrna1;Target=FBgn0028903.1 248 774 +
Chr2	stalkie_big_nohaplotig	CDS	33277894	33278110	.	+	0	Parent=FBgn0028903.1.mrna1;Target=FBgn0028903.1 775 991 +
Chr2	stalkie_big_nohaplotig	CDS	33278285	33278757	.	+	2	Parent=FBgn0028903.1.mrna1;Target=FBgn0028903.1 992 1464 +
Chr2	gffcl	locus	33279802	33281596	.	-	.	ID=RLOC_00016161;geneIDs=comp122107_c0_seq1.path2;transcripts=comp122107_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	33279802	33281596	.	-	.	ID=comp122107_c0_seq1.mrna2;geneID=comp122107_c0_seq1.path2;Name=comp122107_c0_seq1;Dir=sensecoverage=89.8;identity=99.8;matches=500;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016161
Chr2	stalkie_big_nohaplotig	exon	33279802	33280021	100	-	.	Parent=comp122107_c0_seq1.mrna2;Target=comp122107_c0_seq1 321 540 +
Chr2	stalkie_big_nohaplotig	exon	33280914	33281026	100	-	.	Parent=comp122107_c0_seq1.mrna2;Target=comp122107_c0_seq1 208 320 +
Chr2	stalkie_big_nohaplotig	exon	33281429	33281596	99	-	.	Parent=comp122107_c0_seq1.mrna2;Target=comp122107_c0_seq1 40 207 +
Chr2	stalkie_big_nohaplotig	CDS	33279931	33280021	.	-	1	Parent=comp122107_c0_seq1.mrna2;Target=comp122107_c0_seq1 321 411 +
Chr2	stalkie_big_nohaplotig	CDS	33280914	33281023	.	-	0	Parent=comp122107_c0_seq1.mrna2;Target=comp122107_c0_seq1 211 320 +
Chr2	gffcl	locus	33288939	33302056	.	-	.	ID=RLOC_00016162;geneIDs=FBgn0263120.1.path1;transcripts=FBgn0263120.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33288939	33302056	.	-	.	ID=FBgn0263120.1.mrna1;geneID=FBgn0263120.1.path1;Name=FBgn0263120.1;Dir=sensecoverage=100.0;identity=99.6;matches=2155;mismatches=8;indels=0;unknowns=0;locus=RLOC_00016162
Chr2	stalkie_big_nohaplotig	exon	33288939	33289090	100	-	.	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 2012 2163 +
Chr2	stalkie_big_nohaplotig	exon	33289895	33290170	99	-	.	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 1736 2011 +
Chr2	stalkie_big_nohaplotig	exon	33290228	33290381	99	-	.	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 1582 1735 +
Chr2	stalkie_big_nohaplotig	exon	33290450	33290559	98	-	.	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 1472 1581 +
Chr2	stalkie_big_nohaplotig	exon	33290627	33290799	99	-	.	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 1299 1471 +
Chr2	stalkie_big_nohaplotig	exon	33290864	33291003	99	-	.	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 1159 1298 +
Chr2	stalkie_big_nohaplotig	exon	33291926	33292100	100	-	.	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 984 1158 +
Chr2	stalkie_big_nohaplotig	exon	33292161	33292320	98	-	.	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 824 983 +
Chr2	stalkie_big_nohaplotig	exon	33292463	33292669	100	-	.	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 617 823 +
Chr2	stalkie_big_nohaplotig	exon	33292734	33293172	100	-	.	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 178 616 +
Chr2	stalkie_big_nohaplotig	exon	33295951	33296086	100	-	.	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 42 177 +
Chr2	stalkie_big_nohaplotig	exon	33302016	33302056	100	-	.	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 1 41 +
Chr2	stalkie_big_nohaplotig	CDS	33288939	33289090	.	-	2	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 2012 2163 +
Chr2	stalkie_big_nohaplotig	CDS	33289895	33290170	.	-	2	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 1736 2011 +
Chr2	stalkie_big_nohaplotig	CDS	33290228	33290381	.	-	0	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 1582 1735 +
Chr2	stalkie_big_nohaplotig	CDS	33290450	33290559	.	-	2	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 1472 1581 +
Chr2	stalkie_big_nohaplotig	CDS	33290627	33290799	.	-	1	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 1299 1471 +
Chr2	stalkie_big_nohaplotig	CDS	33290864	33291003	.	-	0	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 1159 1298 +
Chr2	stalkie_big_nohaplotig	CDS	33291926	33292100	.	-	1	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 984 1158 +
Chr2	stalkie_big_nohaplotig	CDS	33292161	33292320	.	-	2	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 824 983 +
Chr2	stalkie_big_nohaplotig	CDS	33292463	33292669	.	-	2	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 617 823 +
Chr2	stalkie_big_nohaplotig	CDS	33292734	33293172	.	-	0	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 178 616 +
Chr2	stalkie_big_nohaplotig	CDS	33295951	33296086	.	-	1	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 42 177 +
Chr2	stalkie_big_nohaplotig	CDS	33302016	33302056	.	-	0	Parent=FBgn0263120.1.mrna1;Target=FBgn0263120.1 1 41 +
Chr2	gffcl	locus	33330099	33334112	.	-	.	ID=RLOC_00016163;geneIDs=comp163784_c1_seq1.path1;transcripts=comp163784_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33330099	33334112	.	-	.	ID=comp163784_c1_seq1.mrna1;geneID=comp163784_c1_seq1.path1;Name=comp163784_c1_seq1;Dir=sensecoverage=87.9;identity=99.5;matches=3129;mismatches=2;indels=15;unknowns=0;locus=RLOC_00016163
Chr2	stalkie_big_nohaplotig	exon	33330099	33330589	100	-	.	Parent=comp163784_c1_seq1.mrna1;Target=comp163784_c1_seq1 2641 3131 +
Chr2	stalkie_big_nohaplotig	exon	33330931	33332690	99	-	.	Parent=comp163784_c1_seq1.mrna1;Target=comp163784_c1_seq1 881 2640 +
Chr2	stalkie_big_nohaplotig	exon	33332773	33333132	95	-	.	Parent=comp163784_c1_seq1.mrna1;Target=comp163784_c1_seq1 536 880 +
Chr2	stalkie_big_nohaplotig	exon	33333509	33333680	100	-	.	Parent=comp163784_c1_seq1.mrna1;Target=comp163784_c1_seq1 364 535 +
Chr2	stalkie_big_nohaplotig	exon	33333750	33334112	100	-	.	Parent=comp163784_c1_seq1.mrna1;Target=comp163784_c1_seq1 1 363 +
Chr2	stalkie_big_nohaplotig	CDS	33330242	33330589	.	-	0	Parent=comp163784_c1_seq1.mrna1;Target=comp163784_c1_seq1 2641 2988 +
Chr2	stalkie_big_nohaplotig	CDS	33330931	33332690	.	-	2	Parent=comp163784_c1_seq1.mrna1;Target=comp163784_c1_seq1 881 2640 +
Chr2	stalkie_big_nohaplotig	CDS	33332773	33333132	.	-	2	Parent=comp163784_c1_seq1.mrna1;Target=comp163784_c1_seq1 536 880 +
Chr2	stalkie_big_nohaplotig	CDS	33333509	33333680	.	-	0	Parent=comp163784_c1_seq1.mrna1;Target=comp163784_c1_seq1 364 535 +
Chr2	stalkie_big_nohaplotig	CDS	33333750	33334112	.	-	0	Parent=comp163784_c1_seq1.mrna1;Target=comp163784_c1_seq1 1 363 +
Chr2	gffcl	locus	33345402	33345800	.	-	.	ID=RLOC_00016164;geneIDs=comp113129_c0_seq1.path1;transcripts=comp113129_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33345402	33345800	.	-	.	ID=comp113129_c0_seq1.mrna1;geneID=comp113129_c0_seq1.path1;Name=comp113129_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.5;matches=385;mismatches=10;indels=4;unknowns=0;Target=comp113129_c0_seq1 395 1 .;CDS_Target=comp113129_c0_seq1 72 1 .;locus=RLOC_00016164
Chr2	stalkie_big_nohaplotig	exon	33345402	33345800	96	-	.	Parent=comp113129_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	33345729	33345800	.	-	0	Parent=comp113129_c0_seq1.mrna1
Chr2	gffcl	locus	33349122	33353625	.	+	.	ID=RLOC_00016165;geneIDs=FBgn0003742.4.path1;transcripts=FBgn0003742.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33349122	33353625	.	+	.	ID=FBgn0003742.4.mrna1;geneID=FBgn0003742.4.path1;Name=FBgn0003742.4;Dir=sensecoverage=100.0;identity=99.9;matches=752;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016165
Chr2	stalkie_big_nohaplotig	exon	33349122	33349145	100	+	.	Parent=FBgn0003742.4.mrna1;Target=FBgn0003742.4 1 24 +
Chr2	stalkie_big_nohaplotig	exon	33349374	33349429	100	+	.	Parent=FBgn0003742.4.mrna1;Target=FBgn0003742.4 25 80 +
Chr2	stalkie_big_nohaplotig	exon	33349497	33349550	98	+	.	Parent=FBgn0003742.4.mrna1;Target=FBgn0003742.4 81 134 +
Chr2	stalkie_big_nohaplotig	exon	33350005	33350059	100	+	.	Parent=FBgn0003742.4.mrna1;Target=FBgn0003742.4 135 189 +
Chr2	stalkie_big_nohaplotig	exon	33352454	33352582	100	+	.	Parent=FBgn0003742.4.mrna1;Target=FBgn0003742.4 190 318 +
Chr2	stalkie_big_nohaplotig	exon	33352998	33353176	100	+	.	Parent=FBgn0003742.4.mrna1;Target=FBgn0003742.4 319 497 +
Chr2	stalkie_big_nohaplotig	exon	33353303	33353541	100	+	.	Parent=FBgn0003742.4.mrna1;Target=FBgn0003742.4 498 736 +
Chr2	stalkie_big_nohaplotig	exon	33353609	33353625	100	+	.	Parent=FBgn0003742.4.mrna1;Target=FBgn0003742.4 737 753 +
Chr2	stalkie_big_nohaplotig	CDS	33349122	33349145	.	+	0	Parent=FBgn0003742.4.mrna1;Target=FBgn0003742.4 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	33349374	33349429	.	+	0	Parent=FBgn0003742.4.mrna1;Target=FBgn0003742.4 25 80 +
Chr2	stalkie_big_nohaplotig	CDS	33349497	33349550	.	+	1	Parent=FBgn0003742.4.mrna1;Target=FBgn0003742.4 81 134 +
Chr2	stalkie_big_nohaplotig	CDS	33350005	33350059	.	+	1	Parent=FBgn0003742.4.mrna1;Target=FBgn0003742.4 135 189 +
Chr2	stalkie_big_nohaplotig	CDS	33352454	33352582	.	+	0	Parent=FBgn0003742.4.mrna1;Target=FBgn0003742.4 190 318 +
Chr2	stalkie_big_nohaplotig	CDS	33352998	33353176	.	+	0	Parent=FBgn0003742.4.mrna1;Target=FBgn0003742.4 319 497 +
Chr2	stalkie_big_nohaplotig	CDS	33353303	33353541	.	+	1	Parent=FBgn0003742.4.mrna1;Target=FBgn0003742.4 498 736 +
Chr2	stalkie_big_nohaplotig	CDS	33353609	33353625	.	+	2	Parent=FBgn0003742.4.mrna1;Target=FBgn0003742.4 737 753 +
Chr2	gffcl	locus	33355076	33355668	.	-	.	ID=RLOC_00016166;geneIDs=FBgn0050077.1.path1;transcripts=FBgn0050077.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33355076	33355668	.	-	.	ID=FBgn0050077.1.mrna1;geneID=FBgn0050077.1.path1;Name=FBgn0050077.1;Dir=sensecoverage=100.0;identity=99.3;matches=411;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016166
Chr2	stalkie_big_nohaplotig	exon	33355076	33355192	99	-	.	Parent=FBgn0050077.1.mrna1;Target=FBgn0050077.1 298 414 +
Chr2	stalkie_big_nohaplotig	exon	33355258	33355390	100	-	.	Parent=FBgn0050077.1.mrna1;Target=FBgn0050077.1 165 297 +
Chr2	stalkie_big_nohaplotig	exon	33355447	33355519	97	-	.	Parent=FBgn0050077.1.mrna1;Target=FBgn0050077.1 92 164 +
Chr2	stalkie_big_nohaplotig	exon	33355578	33355668	100	-	.	Parent=FBgn0050077.1.mrna1;Target=FBgn0050077.1 1 91 +
Chr2	stalkie_big_nohaplotig	CDS	33355076	33355192	.	-	0	Parent=FBgn0050077.1.mrna1;Target=FBgn0050077.1 298 414 +
Chr2	stalkie_big_nohaplotig	CDS	33355258	33355390	.	-	1	Parent=FBgn0050077.1.mrna1;Target=FBgn0050077.1 165 297 +
Chr2	stalkie_big_nohaplotig	CDS	33355447	33355519	.	-	2	Parent=FBgn0050077.1.mrna1;Target=FBgn0050077.1 92 164 +
Chr2	stalkie_big_nohaplotig	CDS	33355578	33355668	.	-	0	Parent=FBgn0050077.1.mrna1;Target=FBgn0050077.1 1 91 +
Chr2	gffcl	locus	33357336	33358297	.	+	.	ID=RLOC_00016167;geneIDs=ORF2492.path1;transcripts=ORF2492.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33357336	33358297	.	+	.	ID=ORF2492.mrna1;geneID=ORF2492.path1;Name=ORF2492;Dir=sensecoverage=98.5;identity=98.5;matches=826;mismatches=7;indels=6;unknowns=0;locus=RLOC_00016167
Chr2	stalkie_big_nohaplotig	exon	33357336	33357479	98	+	.	Parent=ORF2492.mrna1;Target=ORF2492 14 157 +
Chr2	stalkie_big_nohaplotig	exon	33357552	33357705	98	+	.	Parent=ORF2492.mrna1;Target=ORF2492 158 311 +
Chr2	stalkie_big_nohaplotig	exon	33357763	33358297	98	+	.	Parent=ORF2492.mrna1;Target=ORF2492 312 852 +
Chr2	stalkie_big_nohaplotig	CDS	33357338	33357479	.	+	0	Parent=ORF2492.mrna1;Target=ORF2492 16 157 +
Chr2	stalkie_big_nohaplotig	CDS	33357552	33357705	.	+	2	Parent=ORF2492.mrna1;Target=ORF2492 158 311 +
Chr2	stalkie_big_nohaplotig	CDS	33357763	33358297	.	+	1	Parent=ORF2492.mrna1;Target=ORF2492 312 852 +
Chr2	gffcl	locus	33359352	33360772	.	-	.	ID=RLOC_00016168;geneIDs=AAEL017220.3.path1;transcripts=AAEL017220.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33359352	33360772	.	-	.	ID=AAEL017220.3.mrna1;geneID=AAEL017220.3.path1;Name=AAEL017220.3;Dir=sensecoverage=100.0;identity=99.6;matches=1294;mismatches=5;indels=0;unknowns=0;locus=RLOC_00016168
Chr2	stalkie_big_nohaplotig	exon	33359352	33359929	99	-	.	Parent=AAEL017220.3.mrna1;Target=AAEL017220.3 722 1299 +
Chr2	stalkie_big_nohaplotig	exon	33359989	33360329	100	-	.	Parent=AAEL017220.3.mrna1;Target=AAEL017220.3 381 721 +
Chr2	stalkie_big_nohaplotig	exon	33360393	33360772	99	-	.	Parent=AAEL017220.3.mrna1;Target=AAEL017220.3 1 380 +
Chr2	stalkie_big_nohaplotig	CDS	33359352	33359929	.	-	2	Parent=AAEL017220.3.mrna1;Target=AAEL017220.3 722 1299 +
Chr2	stalkie_big_nohaplotig	CDS	33359989	33360329	.	-	1	Parent=AAEL017220.3.mrna1;Target=AAEL017220.3 381 721 +
Chr2	stalkie_big_nohaplotig	CDS	33360393	33360772	.	-	0	Parent=AAEL017220.3.mrna1;Target=AAEL017220.3 1 380 +
Chr2	gffcl	locus	33363744	33372631	.	-	.	ID=RLOC_00016169;geneIDs=FBgn0034708.1.path1;transcripts=FBgn0034708.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33363744	33372631	.	-	.	ID=FBgn0034708.1.mrna1;geneID=FBgn0034708.1.path1;Name=FBgn0034708.1;Dir=sensecoverage=100.0;identity=99.8;matches=2468;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016169
Chr2	stalkie_big_nohaplotig	exon	33363744	33363902	100	-	.	Parent=FBgn0034708.1.mrna1;Target=FBgn0034708.1 2314 2472 +
Chr2	stalkie_big_nohaplotig	exon	33363965	33364148	100	-	.	Parent=FBgn0034708.1.mrna1;Target=FBgn0034708.1 2130 2313 +
Chr2	stalkie_big_nohaplotig	exon	33364964	33365527	99	-	.	Parent=FBgn0034708.1.mrna1;Target=FBgn0034708.1 1566 2129 +
Chr2	stalkie_big_nohaplotig	exon	33365587	33365928	100	-	.	Parent=FBgn0034708.1.mrna1;Target=FBgn0034708.1 1224 1565 +
Chr2	stalkie_big_nohaplotig	exon	33365995	33366143	100	-	.	Parent=FBgn0034708.1.mrna1;Target=FBgn0034708.1 1075 1223 +
Chr2	stalkie_big_nohaplotig	exon	33367267	33367353	100	-	.	Parent=FBgn0034708.1.mrna1;Target=FBgn0034708.1 988 1074 +
Chr2	stalkie_big_nohaplotig	exon	33367414	33368147	99	-	.	Parent=FBgn0034708.1.mrna1;Target=FBgn0034708.1 254 987 +
Chr2	stalkie_big_nohaplotig	exon	33368223	33368409	100	-	.	Parent=FBgn0034708.1.mrna1;Target=FBgn0034708.1 67 253 +
Chr2	stalkie_big_nohaplotig	exon	33372566	33372631	100	-	.	Parent=FBgn0034708.1.mrna1;Target=FBgn0034708.1 1 66 +
Chr2	stalkie_big_nohaplotig	CDS	33363744	33363902	.	-	0	Parent=FBgn0034708.1.mrna1;Target=FBgn0034708.1 2314 2472 +
Chr2	stalkie_big_nohaplotig	CDS	33363965	33364148	.	-	1	Parent=FBgn0034708.1.mrna1;Target=FBgn0034708.1 2130 2313 +
Chr2	stalkie_big_nohaplotig	CDS	33364964	33365527	.	-	1	Parent=FBgn0034708.1.mrna1;Target=FBgn0034708.1 1566 2129 +
Chr2	stalkie_big_nohaplotig	CDS	33365587	33365928	.	-	1	Parent=FBgn0034708.1.mrna1;Target=FBgn0034708.1 1224 1565 +
Chr2	stalkie_big_nohaplotig	CDS	33365995	33366143	.	-	0	Parent=FBgn0034708.1.mrna1;Target=FBgn0034708.1 1075 1223 +
Chr2	stalkie_big_nohaplotig	CDS	33367267	33367353	.	-	0	Parent=FBgn0034708.1.mrna1;Target=FBgn0034708.1 988 1074 +
Chr2	stalkie_big_nohaplotig	CDS	33367414	33368147	.	-	2	Parent=FBgn0034708.1.mrna1;Target=FBgn0034708.1 254 987 +
Chr2	stalkie_big_nohaplotig	CDS	33368223	33368409	.	-	0	Parent=FBgn0034708.1.mrna1;Target=FBgn0034708.1 67 253 +
Chr2	stalkie_big_nohaplotig	CDS	33372566	33372631	.	-	0	Parent=FBgn0034708.1.mrna1;Target=FBgn0034708.1 1 66 +
Chr2	gffcl	locus	33375411	33375691	.	+	.	ID=RLOC_00016170;geneIDs=comp87861_c0_seq1.path1;transcripts=comp87861_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33375411	33375691	.	+	.	ID=comp87861_c0_seq1.mrna1;geneID=comp87861_c0_seq1.path1;Name=comp87861_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=281;mismatches=0;indels=0;unknowns=0;Target=comp87861_c0_seq1 281 1 .;CDS_Target=comp87861_c0_seq1 104 3 .;locus=RLOC_00016170
Chr2	stalkie_big_nohaplotig	exon	33375411	33375691	100	+	.	Parent=comp87861_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	33375413	33375514	.	+	0	Parent=comp87861_c0_seq1.mrna1
Chr2	gffcl	locus	33375961	33418701	.	-	.	ID=RLOC_00016171;geneIDs=FBgn0243516.1.path1,comp157329_c0_seq1.path1;transcripts=FBgn0243516.1.mrna1,comp157329_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33375961	33389977	.	-	.	ID=FBgn0243516.1.mrna1;geneID=FBgn0243516.1.path1;Name=FBgn0243516.1;Dir=sensecoverage=99.6;identity=99.8;matches=2365;mismatches=1;indels=3;unknowns=0;locus=RLOC_00016171
Chr2	stalkie_big_nohaplotig	exon	33375961	33376217	98	-	.	Parent=FBgn0243516.1.mrna1;Target=FBgn0243516.1 2120 2379 +
Chr2	stalkie_big_nohaplotig	exon	33379151	33379421	100	-	.	Parent=FBgn0243516.1.mrna1;Target=FBgn0243516.1 1849 2119 +
Chr2	stalkie_big_nohaplotig	exon	33383264	33383724	100	-	.	Parent=FBgn0243516.1.mrna1;Target=FBgn0243516.1 1388 1848 +
Chr2	stalkie_big_nohaplotig	exon	33383789	33383928	100	-	.	Parent=FBgn0243516.1.mrna1;Target=FBgn0243516.1 1248 1387 +
Chr2	stalkie_big_nohaplotig	exon	33384704	33385135	100	-	.	Parent=FBgn0243516.1.mrna1;Target=FBgn0243516.1 816 1247 +
Chr2	stalkie_big_nohaplotig	exon	33385829	33386013	100	-	.	Parent=FBgn0243516.1.mrna1;Target=FBgn0243516.1 631 815 +
Chr2	stalkie_big_nohaplotig	exon	33387837	33388102	100	-	.	Parent=FBgn0243516.1.mrna1;Target=FBgn0243516.1 365 630 +
Chr2	stalkie_big_nohaplotig	exon	33388171	33388330	100	-	.	Parent=FBgn0243516.1.mrna1;Target=FBgn0243516.1 205 364 +
Chr2	stalkie_big_nohaplotig	exon	33389784	33389977	100	-	.	Parent=FBgn0243516.1.mrna1;Target=FBgn0243516.1 11 204 +
Chr2	stalkie_big_nohaplotig	CDS	33375961	33376217	.	-	2	Parent=FBgn0243516.1.mrna1;Target=FBgn0243516.1 2120 2379 +
Chr2	stalkie_big_nohaplotig	CDS	33379151	33379421	.	-	0	Parent=FBgn0243516.1.mrna1;Target=FBgn0243516.1 1849 2119 +
Chr2	stalkie_big_nohaplotig	CDS	33383264	33383724	.	-	2	Parent=FBgn0243516.1.mrna1;Target=FBgn0243516.1 1388 1848 +
Chr2	stalkie_big_nohaplotig	CDS	33383789	33383928	.	-	1	Parent=FBgn0243516.1.mrna1;Target=FBgn0243516.1 1248 1387 +
Chr2	stalkie_big_nohaplotig	CDS	33384704	33385135	.	-	1	Parent=FBgn0243516.1.mrna1;Target=FBgn0243516.1 816 1247 +
Chr2	stalkie_big_nohaplotig	CDS	33385829	33386013	.	-	0	Parent=FBgn0243516.1.mrna1;Target=FBgn0243516.1 631 815 +
Chr2	stalkie_big_nohaplotig	CDS	33387837	33388102	.	-	2	Parent=FBgn0243516.1.mrna1;Target=FBgn0243516.1 365 630 +
Chr2	stalkie_big_nohaplotig	CDS	33388171	33388330	.	-	0	Parent=FBgn0243516.1.mrna1;Target=FBgn0243516.1 205 364 +
Chr2	stalkie_big_nohaplotig	CDS	33389784	33389975	.	-	0	Parent=FBgn0243516.1.mrna1;Target=FBgn0243516.1 13 204 +
Chr2	stalkie_big_nohaplotig	mRNA	33378714	33418701	.	-	.	ID=comp157329_c0_seq1.mrna1;geneID=comp157329_c0_seq1.path1;Name=comp157329_c0_seq1;Dir=antisensecoverage=99.8;identity=99.8;matches=3286;mismatches=4;indels=3;unknowns=0;locus=RLOC_00016171
Chr2	stalkie_big_nohaplotig	exon	33378714	33379421	99	-	.	Parent=comp157329_c0_seq1.mrna1;Target=comp157329_c0_seq1 5 713 -
Chr2	stalkie_big_nohaplotig	exon	33383264	33383724	100	-	.	Parent=comp157329_c0_seq1.mrna1;Target=comp157329_c0_seq1 714 1174 -
Chr2	stalkie_big_nohaplotig	exon	33383789	33383928	100	-	.	Parent=comp157329_c0_seq1.mrna1;Target=comp157329_c0_seq1 1175 1314 -
Chr2	stalkie_big_nohaplotig	exon	33384704	33385135	100	-	.	Parent=comp157329_c0_seq1.mrna1;Target=comp157329_c0_seq1 1315 1746 -
Chr2	stalkie_big_nohaplotig	exon	33385829	33386013	100	-	.	Parent=comp157329_c0_seq1.mrna1;Target=comp157329_c0_seq1 1747 1931 -
Chr2	stalkie_big_nohaplotig	exon	33387837	33388102	100	-	.	Parent=comp157329_c0_seq1.mrna1;Target=comp157329_c0_seq1 1932 2197 -
Chr2	stalkie_big_nohaplotig	exon	33388171	33388330	100	-	.	Parent=comp157329_c0_seq1.mrna1;Target=comp157329_c0_seq1 2198 2357 -
Chr2	stalkie_big_nohaplotig	exon	33389784	33389975	100	-	.	Parent=comp157329_c0_seq1.mrna1;Target=comp157329_c0_seq1 2358 2549 -
Chr2	stalkie_big_nohaplotig	exon	33417955	33418701	99	-	.	Parent=comp157329_c0_seq1.mrna1;Target=comp157329_c0_seq1 2550 3296 -
Chr2	stalkie_big_nohaplotig	CDS	33379143	33379421	.	-	0	Parent=comp157329_c0_seq1.mrna1;Target=comp157329_c0_seq1 435 713 .
Chr2	stalkie_big_nohaplotig	CDS	33383264	33383724	.	-	2	Parent=comp157329_c0_seq1.mrna1;Target=comp157329_c0_seq1 714 1174 .
Chr2	stalkie_big_nohaplotig	CDS	33383789	33383928	.	-	1	Parent=comp157329_c0_seq1.mrna1;Target=comp157329_c0_seq1 1175 1314 .
Chr2	stalkie_big_nohaplotig	CDS	33384704	33385135	.	-	1	Parent=comp157329_c0_seq1.mrna1;Target=comp157329_c0_seq1 1315 1746 .
Chr2	stalkie_big_nohaplotig	CDS	33385829	33386013	.	-	0	Parent=comp157329_c0_seq1.mrna1;Target=comp157329_c0_seq1 1747 1931 .
Chr2	stalkie_big_nohaplotig	CDS	33387837	33388102	.	-	2	Parent=comp157329_c0_seq1.mrna1;Target=comp157329_c0_seq1 1932 2197 .
Chr2	stalkie_big_nohaplotig	CDS	33388171	33388330	.	-	0	Parent=comp157329_c0_seq1.mrna1;Target=comp157329_c0_seq1 2198 2357 .
Chr2	stalkie_big_nohaplotig	CDS	33389784	33389975	.	-	0	Parent=comp157329_c0_seq1.mrna1;Target=comp157329_c0_seq1 2358 2549 .
Chr2	gffcl	locus	33422397	33425854	.	-	.	ID=RLOC_00016172;geneIDs=FBgn0034697.1.path1;transcripts=FBgn0034697.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33422397	33425854	.	-	.	ID=FBgn0034697.1.mrna1;geneID=FBgn0034697.1.path1;Name=FBgn0034697.1;Dir=sensecoverage=100.0;identity=99.6;matches=2714;mismatches=7;indels=3;unknowns=0;locus=RLOC_00016172
Chr2	stalkie_big_nohaplotig	exon	33422397	33423467	99	-	.	Parent=FBgn0034697.1.mrna1;Target=FBgn0034697.1 1651 2724 +
Chr2	stalkie_big_nohaplotig	exon	33423974	33424528	99	-	.	Parent=FBgn0034697.1.mrna1;Target=FBgn0034697.1 1096 1650 +
Chr2	stalkie_big_nohaplotig	exon	33424582	33424821	99	-	.	Parent=FBgn0034697.1.mrna1;Target=FBgn0034697.1 856 1095 +
Chr2	stalkie_big_nohaplotig	exon	33424880	33425665	100	-	.	Parent=FBgn0034697.1.mrna1;Target=FBgn0034697.1 70 855 +
Chr2	stalkie_big_nohaplotig	exon	33425786	33425854	100	-	.	Parent=FBgn0034697.1.mrna1;Target=FBgn0034697.1 1 69 +
Chr2	stalkie_big_nohaplotig	CDS	33422397	33423467	.	-	0	Parent=FBgn0034697.1.mrna1;Target=FBgn0034697.1 1651 2724 +
Chr2	stalkie_big_nohaplotig	CDS	33423974	33424528	.	-	0	Parent=FBgn0034697.1.mrna1;Target=FBgn0034697.1 1096 1650 +
Chr2	stalkie_big_nohaplotig	CDS	33424582	33424821	.	-	0	Parent=FBgn0034697.1.mrna1;Target=FBgn0034697.1 856 1095 +
Chr2	stalkie_big_nohaplotig	CDS	33424880	33425665	.	-	0	Parent=FBgn0034697.1.mrna1;Target=FBgn0034697.1 70 855 +
Chr2	stalkie_big_nohaplotig	CDS	33425786	33425854	.	-	0	Parent=FBgn0034697.1.mrna1;Target=FBgn0034697.1 1 69 +
Chr2	gffcl	locus	33428343	33460321	.	-	.	ID=RLOC_00016173;geneIDs=FBgn0003892.1.path1,comp161539_c0_seq1.path1;transcripts=FBgn0003892.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33429333	33460321	.	-	.	ID=FBgn0003892.1.mrna1;geneID=FBgn0003892.1.path1;Name=FBgn0003892.1;Dir=sensecoverage=100.0;identity=99.8;matches=4055;mismatches=10;indels=0;unknowns=0;locus=RLOC_00016173
Chr2	stalkie_big_nohaplotig	exon	33429333	33430235	99	-	.	Parent=FBgn0003892.1.mrna1;Target=FBgn0003892.1 3163 4065 +
Chr2	stalkie_big_nohaplotig	exon	33430645	33430916	100	-	.	Parent=FBgn0003892.1.mrna1;Target=FBgn0003892.1 2891 3162 +
Chr2	stalkie_big_nohaplotig	exon	33430988	33431195	100	-	.	Parent=FBgn0003892.1.mrna1;Target=FBgn0003892.1 2683 2890 +
Chr2	stalkie_big_nohaplotig	exon	33431259	33433224	99	-	.	Parent=FBgn0003892.1.mrna1;Target=FBgn0003892.1 717 2682 +
Chr2	stalkie_big_nohaplotig	exon	33433328	33433881	99	-	.	Parent=FBgn0003892.1.mrna1;Target=FBgn0003892.1 163 716 +
Chr2	stalkie_big_nohaplotig	exon	33460160	33460321	100	-	.	Parent=FBgn0003892.1.mrna1;Target=FBgn0003892.1 1 162 +
Chr2	stalkie_big_nohaplotig	CDS	33429333	33430235	.	-	0	Parent=FBgn0003892.1.mrna1;Target=FBgn0003892.1 3163 4065 +
Chr2	stalkie_big_nohaplotig	CDS	33430645	33430916	.	-	2	Parent=FBgn0003892.1.mrna1;Target=FBgn0003892.1 2891 3162 +
Chr2	stalkie_big_nohaplotig	CDS	33430988	33431195	.	-	0	Parent=FBgn0003892.1.mrna1;Target=FBgn0003892.1 2683 2890 +
Chr2	stalkie_big_nohaplotig	CDS	33431259	33433224	.	-	1	Parent=FBgn0003892.1.mrna1;Target=FBgn0003892.1 717 2682 +
Chr2	stalkie_big_nohaplotig	CDS	33433328	33433881	.	-	0	Parent=FBgn0003892.1.mrna1;Target=FBgn0003892.1 163 716 +
Chr2	stalkie_big_nohaplotig	CDS	33460160	33460321	.	-	0	Parent=FBgn0003892.1.mrna1;Target=FBgn0003892.1 1 162 +
Chr2	gffcl	locus	33449561	33451868	.	+	.	ID=RLOC_00016174;geneIDs=CPIJ003908.1.path2;transcripts=CPIJ003908.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	33449561	33451868	.	+	.	ID=CPIJ003908.1.mrna2;geneID=CPIJ003908.1.path2;Name=CPIJ003908.1;Dir=indeterminatecoverage=93.4;identity=99.7;matches=2303;mismatches=5;indels=1;unknowns=0;Target=CPIJ003908.1 2435 127 .;CDS_Target=CPIJ003908.1 2433 127 .;locus=RLOC_00016174
Chr2	stalkie_big_nohaplotig	exon	33449561	33451868	99	+	.	Parent=CPIJ003908.1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	33449561	33451866	.	+	0	Parent=CPIJ003908.1.mrna2
Chr2	gffcl	locus	33514770	33515822	.	.	.	ID=RLOC_00016176;geneIDs=comp150252_c0_seq1.path1,comp158752_c1_seq1.path1;transcripts=comp158752_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33515059	33515822	.	+	.	ID=comp158752_c1_seq1.mrna1;geneID=comp158752_c1_seq1.path1;Name=comp158752_c1_seq1;Dir=indeterminatecoverage=99.0;identity=91.9;matches=718;mismatches=37;indels=26;unknowns=0;Target=comp158752_c1_seq1 772 1 .;CDS_Target=comp158752_c1_seq1 385 299 .;locus=RLOC_00016176
Chr2	stalkie_big_nohaplotig	exon	33515059	33515822	91	+	.	Parent=comp158752_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	33515352	33515434	.	+	0	Parent=comp158752_c1_seq1.mrna1
Chr2	gffcl	locus	33515902	33516509	.	+	.	ID=RLOC_00016177;geneIDs=comp155718_c0_seq1.path1;transcripts=comp155718_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33515902	33516509	.	+	.	ID=comp155718_c0_seq1.mrna1;geneID=comp155718_c0_seq1.path1;Name=comp155718_c0_seq1;Dir=indeterminatecoverage=77.6;identity=75.5;matches=482;mismatches=28;indels=128;unknowns=0;Target=comp155718_c0_seq1 121 47 .;locus=RLOC_00016177
Chr2	stalkie_big_nohaplotig	exon	33515902	33516440	74	+	.	Parent=comp155718_c0_seq1.mrna1;Target=comp155718_c0_seq1 574 4 .
Chr2	stalkie_big_nohaplotig	exon	33516491	33516509	100	+	.	Parent=comp155718_c0_seq1.mrna1;Target=comp155718_c0_seq1 614 596 .
Chr2	stalkie_big_nohaplotig	CDS	33515945	33516018	.	+	0	Parent=comp155718_c0_seq1.mrna1
Chr2	gffcl	locus	33540678	33541535	.	+	.	ID=RLOC_00016179;geneIDs=comp153282_c0_seq1.path1;transcripts=comp153282_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33540678	33541535	.	+	.	ID=comp153282_c0_seq1.mrna1;geneID=comp153282_c0_seq1.path1;Name=comp153282_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=858;mismatches=0;indels=0;unknowns=0;Target=comp153282_c0_seq1 858 1 .;CDS_Target=comp153282_c0_seq1 450 337 .;locus=RLOC_00016179
Chr2	stalkie_big_nohaplotig	exon	33540678	33541535	100	+	.	Parent=comp153282_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	33541014	33541127	.	+	0	Parent=comp153282_c0_seq1.mrna1
Chr2	gffcl	locus	33550287	33550958	.	+	.	ID=RLOC_00016181;geneIDs=FBgn0034000.1.path1;transcripts=FBgn0034000.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33550287	33550958	.	+	.	ID=FBgn0034000.1.mrna1;geneID=FBgn0034000.1.path1;Name=FBgn0034000.1;Dir=sensecoverage=100.0;identity=99.2;matches=610;mismatches=4;indels=1;unknowns=0;Target=FBgn0034000.1 3 173 +;locus=RLOC_00016181
Chr2	stalkie_big_nohaplotig	exon	33550287	33550828	99	+	.	Parent=FBgn0034000.1.mrna1;Target=FBgn0034000.1 1 543 +
Chr2	stalkie_big_nohaplotig	exon	33550887	33550958	98	+	.	Parent=FBgn0034000.1.mrna1;Target=FBgn0034000.1 544 615 +
Chr2	stalkie_big_nohaplotig	CDS	33550289	33550458	.	+	0	Parent=FBgn0034000.1.mrna1
Chr2	gffcl	locus	33552221	33589717	.	+	.	ID=RLOC_00016182;geneIDs=FBgn0033310.3.path1,comp163311_c0_seq1.path1;transcripts=comp163311_c0_seq1.mrna1,FBgn0033310.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33552221	33589138	.	+	.	ID=comp163311_c0_seq1.mrna1;geneID=comp163311_c0_seq1.path1;Name=comp163311_c0_seq1;Dir=antisensecoverage=100.0;identity=99.0;matches=1914;mismatches=17;indels=2;unknowns=0;locus=RLOC_00016182
Chr2	stalkie_big_nohaplotig	exon	33552221	33552545	97	+	.	Parent=comp163311_c0_seq1.mrna1;Target=comp163311_c0_seq1 1608 1933 -
Chr2	stalkie_big_nohaplotig	exon	33554818	33555317	99	+	.	Parent=comp163311_c0_seq1.mrna1;Target=comp163311_c0_seq1 1107 1607 -
Chr2	stalkie_big_nohaplotig	exon	33586205	33586297	100	+	.	Parent=comp163311_c0_seq1.mrna1;Target=comp163311_c0_seq1 1014 1106 -
Chr2	stalkie_big_nohaplotig	exon	33586351	33586713	99	+	.	Parent=comp163311_c0_seq1.mrna1;Target=comp163311_c0_seq1 651 1013 -
Chr2	stalkie_big_nohaplotig	exon	33587301	33587690	99	+	.	Parent=comp163311_c0_seq1.mrna1;Target=comp163311_c0_seq1 261 650 -
Chr2	stalkie_big_nohaplotig	exon	33588879	33589138	98	+	.	Parent=comp163311_c0_seq1.mrna1;Target=comp163311_c0_seq1 1 260 -
Chr2	stalkie_big_nohaplotig	CDS	33586384	33586713	.	+	0	Parent=comp163311_c0_seq1.mrna1;Target=comp163311_c0_seq1 651 980 .
Chr2	stalkie_big_nohaplotig	CDS	33587301	33587690	.	+	0	Parent=comp163311_c0_seq1.mrna1;Target=comp163311_c0_seq1 261 650 .
Chr2	stalkie_big_nohaplotig	CDS	33588879	33589136	.	+	0	Parent=comp163311_c0_seq1.mrna1;Target=comp163311_c0_seq1 3 260 .
Chr2	stalkie_big_nohaplotig	mRNA	33555016	33589717	.	+	.	ID=FBgn0033310.3.mrna1;geneID=FBgn0033310.3.path1;Name=FBgn0033310.3;Dir=sensecoverage=99.8;identity=99.3;matches=1957;mismatches=12;indels=1;unknowns=0;Target=FBgn0033310.3 3 74 +;locus=RLOC_00016182
Chr2	stalkie_big_nohaplotig	exon	33555016	33555317	99	+	.	Parent=FBgn0033310.3.mrna1;Target=FBgn0033310.3 1 303 +
Chr2	stalkie_big_nohaplotig	exon	33586205	33586297	100	+	.	Parent=FBgn0033310.3.mrna1;Target=FBgn0033310.3 304 396 +
Chr2	stalkie_big_nohaplotig	exon	33586369	33586713	99	+	.	Parent=FBgn0033310.3.mrna1;Target=FBgn0033310.3 397 741 +
Chr2	stalkie_big_nohaplotig	exon	33587301	33587690	99	+	.	Parent=FBgn0033310.3.mrna1;Target=FBgn0033310.3 742 1131 +
Chr2	stalkie_big_nohaplotig	exon	33588879	33589717	99	+	.	Parent=FBgn0033310.3.mrna1;Target=FBgn0033310.3 1132 1970 +
Chr2	stalkie_big_nohaplotig	CDS	33555018	33555088	.	+	0	Parent=FBgn0033310.3.mrna1
Chr2	gffcl	locus	33591220	33592270	.	+	.	ID=RLOC_00016183;geneIDs=comp159612_c0_seq1.path1;transcripts=comp159612_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33591220	33592270	.	+	.	ID=comp159612_c0_seq1.mrna1;geneID=comp159612_c0_seq1.path1;Name=comp159612_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=1037;mismatches=11;indels=5;unknowns=0;Target=comp159612_c0_seq1 1050 1 .;CDS_Target=comp159612_c0_seq1 433 302 .;locus=RLOC_00016183
Chr2	stalkie_big_nohaplotig	exon	33591220	33592270	98	+	.	Parent=comp159612_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	33591521	33591650	.	+	0	Parent=comp159612_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33609538	33610883	.	+	.	ID=comp158371_c0_seq1.mrna1;geneID=comp158371_c0_seq1.path1;Name=comp158371_c0_seq1;Dir=indeterminatecoverage=100.0;identity=89.4;matches=1245;mismatches=58;indels=90;unknowns=0;Target=comp158371_c0_seq1 1350 1 .;CDS_Target=comp158371_c0_seq1 615 556 .;locus=RLOC_00016184
Chr2	stalkie_big_nohaplotig	exon	33609538	33610883	89	+	.	Parent=comp158371_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	33610110	33610167	.	+	0	Parent=comp158371_c0_seq1.mrna1
Chr2	gffcl	locus	33611064	33611670	.	-	.	ID=RLOC_00016185;geneIDs=FBgn0022027.1.path1;transcripts=FBgn0022027.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33611064	33611670	.	-	.	ID=FBgn0022027.1.mrna1;geneID=FBgn0022027.1.path1;Name=FBgn0022027.1;Dir=sensecoverage=100.0;identity=99.5;matches=546;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016185
Chr2	stalkie_big_nohaplotig	exon	33611064	33611538	99	-	.	Parent=FBgn0022027.1.mrna1;Target=FBgn0022027.1 75 549 +
Chr2	stalkie_big_nohaplotig	exon	33611597	33611670	100	-	.	Parent=FBgn0022027.1.mrna1;Target=FBgn0022027.1 1 74 +
Chr2	stalkie_big_nohaplotig	CDS	33611064	33611538	.	-	1	Parent=FBgn0022027.1.mrna1;Target=FBgn0022027.1 75 549 +
Chr2	stalkie_big_nohaplotig	CDS	33611597	33611670	.	-	0	Parent=FBgn0022027.1.mrna1;Target=FBgn0022027.1 1 74 +
Chr2	gffcl	locus	33614045	33614539	.	-	.	ID=RLOC_00016186;geneIDs=FBgn0051957.1.path1;transcripts=FBgn0051957.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33614045	33614539	.	-	.	ID=FBgn0051957.1.mrna1;geneID=FBgn0051957.1.path1;Name=FBgn0051957.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=494;mismatches=1;indels=0;unknowns=0;Target=FBgn0051957.1 495 1 .;locus=RLOC_00016186
Chr2	stalkie_big_nohaplotig	exon	33614045	33614539	99	-	.	Parent=FBgn0051957.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	33614045	33614539	.	-	0	Parent=FBgn0051957.1.mrna1
Chr2	gffcl	locus	33615968	33618096	.	+	.	ID=RLOC_00016187;geneIDs=FBgn0033316.path1,FBgn0033316.1.path1;transcripts=FBgn0033316.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33615968	33617483	.	+	.	ID=FBgn0033316.1.mrna1;geneID=FBgn0033316.1.path1;Name=FBgn0033316.1;Dir=sensecoverage=100.0;identity=99.7;matches=1346;mismatches=2;indels=2;unknowns=0;Target=FBgn0033316.1 3 35 +;locus=RLOC_00016187
Chr2	stalkie_big_nohaplotig	exon	33615968	33616059	98	+	.	Parent=FBgn0033316.1.mrna1;Target=FBgn0033316.1 1 93 +
Chr2	stalkie_big_nohaplotig	exon	33616164	33617282	99	+	.	Parent=FBgn0033316.1.mrna1;Target=FBgn0033316.1 94 1212 +
Chr2	stalkie_big_nohaplotig	exon	33617347	33617483	99	+	.	Parent=FBgn0033316.1.mrna1;Target=FBgn0033316.1 1213 1350 +
Chr2	stalkie_big_nohaplotig	CDS	33615970	33616001	.	+	0	Parent=FBgn0033316.1.mrna1
Chr2	gffcl	locus	33618365	33619811	.	-	.	ID=RLOC_00016188;geneIDs=FBgn0033317.1.path1;transcripts=FBgn0033317.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33618365	33619811	.	-	.	ID=FBgn0033317.1.mrna1;geneID=FBgn0033317.1.path1;Name=FBgn0033317.1;Dir=sensecoverage=86.3;identity=99.8;matches=1212;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016188
Chr2	stalkie_big_nohaplotig	exon	33618365	33619059	99	-	.	Parent=FBgn0033317.1.mrna1;Target=FBgn0033317.1 520 1214 +
Chr2	stalkie_big_nohaplotig	exon	33619123	33619254	100	-	.	Parent=FBgn0033317.1.mrna1;Target=FBgn0033317.1 388 519 +
Chr2	stalkie_big_nohaplotig	exon	33619314	33619616	100	-	.	Parent=FBgn0033317.1.mrna1;Target=FBgn0033317.1 85 387 +
Chr2	stalkie_big_nohaplotig	exon	33619728	33619811	100	-	.	Parent=FBgn0033317.1.mrna1;Target=FBgn0033317.1 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	33618365	33619059	.	-	0	Parent=FBgn0033317.1.mrna1;Target=FBgn0033317.1 520 1214 +
Chr2	stalkie_big_nohaplotig	CDS	33619123	33619254	.	-	0	Parent=FBgn0033317.1.mrna1;Target=FBgn0033317.1 388 519 +
Chr2	stalkie_big_nohaplotig	CDS	33619314	33619616	.	-	0	Parent=FBgn0033317.1.mrna1;Target=FBgn0033317.1 85 387 +
Chr2	stalkie_big_nohaplotig	CDS	33619728	33619811	.	-	0	Parent=FBgn0033317.1.mrna1;Target=FBgn0033317.1 1 84 +
Chr2	gffcl	locus	33640090	33640947	.	-	.	ID=RLOC_00016189;geneIDs=comp153282_c0_seq1.path2;transcripts=comp153282_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	33640090	33640947	.	-	.	ID=comp153282_c0_seq1.mrna2;geneID=comp153282_c0_seq1.path2;Name=comp153282_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=858;mismatches=0;indels=0;unknowns=0;Target=comp153282_c0_seq1 858 1 .;CDS_Target=comp153282_c0_seq1 450 337 .;locus=RLOC_00016189
Chr2	stalkie_big_nohaplotig	exon	33640090	33640947	100	-	.	Parent=comp153282_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	33640498	33640611	.	-	0	Parent=comp153282_c0_seq1.mrna2
Chr2	gffcl	locus	33641244	33644065	.	-	.	ID=RLOC_00016190;geneIDs=FBgn0033996.1.path1;transcripts=FBgn0033996.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33641244	33644065	.	-	.	ID=FBgn0033996.1.mrna1;geneID=FBgn0033996.1.path1;Name=FBgn0033996.1;Dir=sensecoverage=99.4;identity=99.6;matches=1479;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016190
Chr2	stalkie_big_nohaplotig	exon	33641244	33641395	99	-	.	Parent=FBgn0033996.1.mrna1;Target=FBgn0033996.1 1343 1494 +
Chr2	stalkie_big_nohaplotig	exon	33641469	33642198	99	-	.	Parent=FBgn0033996.1.mrna1;Target=FBgn0033996.1 613 1342 +
Chr2	stalkie_big_nohaplotig	exon	33642260	33642391	99	-	.	Parent=FBgn0033996.1.mrna1;Target=FBgn0033996.1 481 612 +
Chr2	stalkie_big_nohaplotig	exon	33642458	33642691	99	-	.	Parent=FBgn0033996.1.mrna1;Target=FBgn0033996.1 247 480 +
Chr2	stalkie_big_nohaplotig	exon	33643829	33644065	99	-	.	Parent=FBgn0033996.1.mrna1;Target=FBgn0033996.1 10 246 +
Chr2	stalkie_big_nohaplotig	CDS	33641244	33641395	.	-	2	Parent=FBgn0033996.1.mrna1;Target=FBgn0033996.1 1343 1494 +
Chr2	stalkie_big_nohaplotig	CDS	33641469	33642198	.	-	0	Parent=FBgn0033996.1.mrna1;Target=FBgn0033996.1 613 1342 +
Chr2	stalkie_big_nohaplotig	CDS	33642260	33642391	.	-	0	Parent=FBgn0033996.1.mrna1;Target=FBgn0033996.1 481 612 +
Chr2	stalkie_big_nohaplotig	CDS	33642458	33642691	.	-	0	Parent=FBgn0033996.1.mrna1;Target=FBgn0033996.1 247 480 +
Chr2	stalkie_big_nohaplotig	CDS	33643829	33644065	.	-	0	Parent=FBgn0033996.1.mrna1;Target=FBgn0033996.1 10 246 +
Chr2	gffcl	locus	33646468	33649302	.	+	.	ID=RLOC_00016191;geneIDs=FBgn0033995.1.path1;transcripts=FBgn0033995.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33646468	33649302	.	+	.	ID=FBgn0033995.1.mrna1;geneID=FBgn0033995.1.path1;Name=FBgn0033995.1;Dir=sensecoverage=100.0;identity=99.8;matches=1386;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016191
Chr2	stalkie_big_nohaplotig	exon	33646468	33646536	100	+	.	Parent=FBgn0033995.1.mrna1;Target=FBgn0033995.1 1 69 +
Chr2	stalkie_big_nohaplotig	exon	33646596	33646866	100	+	.	Parent=FBgn0033995.1.mrna1;Target=FBgn0033995.1 70 340 +
Chr2	stalkie_big_nohaplotig	exon	33646964	33647189	99	+	.	Parent=FBgn0033995.1.mrna1;Target=FBgn0033995.1 341 566 +
Chr2	stalkie_big_nohaplotig	exon	33647255	33647439	98	+	.	Parent=FBgn0033995.1.mrna1;Target=FBgn0033995.1 567 751 +
Chr2	stalkie_big_nohaplotig	exon	33647500	33647681	100	+	.	Parent=FBgn0033995.1.mrna1;Target=FBgn0033995.1 752 933 +
Chr2	stalkie_big_nohaplotig	exon	33647742	33647927	100	+	.	Parent=FBgn0033995.1.mrna1;Target=FBgn0033995.1 934 1119 +
Chr2	stalkie_big_nohaplotig	exon	33649033	33649302	100	+	.	Parent=FBgn0033995.1.mrna1;Target=FBgn0033995.1 1120 1389 +
Chr2	stalkie_big_nohaplotig	CDS	33646468	33646536	.	+	0	Parent=FBgn0033995.1.mrna1;Target=FBgn0033995.1 1 69 +
Chr2	stalkie_big_nohaplotig	CDS	33646596	33646866	.	+	0	Parent=FBgn0033995.1.mrna1;Target=FBgn0033995.1 70 340 +
Chr2	stalkie_big_nohaplotig	CDS	33646964	33647189	.	+	2	Parent=FBgn0033995.1.mrna1;Target=FBgn0033995.1 341 566 +
Chr2	stalkie_big_nohaplotig	CDS	33647255	33647439	.	+	1	Parent=FBgn0033995.1.mrna1;Target=FBgn0033995.1 567 751 +
Chr2	stalkie_big_nohaplotig	CDS	33647500	33647681	.	+	2	Parent=FBgn0033995.1.mrna1;Target=FBgn0033995.1 752 933 +
Chr2	stalkie_big_nohaplotig	CDS	33647742	33647927	.	+	0	Parent=FBgn0033995.1.mrna1;Target=FBgn0033995.1 934 1119 +
Chr2	stalkie_big_nohaplotig	CDS	33649033	33649302	.	+	0	Parent=FBgn0033995.1.mrna1;Target=FBgn0033995.1 1120 1389 +
Chr2	gffcl	locus	33664315	33683467	.	+	.	ID=RLOC_00016192;geneIDs=comp141582_c0_seq1.path1;transcripts=comp141582_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33664315	33683467	.	+	.	ID=comp141582_c0_seq1.mrna1;geneID=comp141582_c0_seq1.path1;Name=comp141582_c0_seq1;Dir=antisensecoverage=97.7;identity=99.9;matches=994;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016192
Chr2	stalkie_big_nohaplotig	exon	33664315	33665171	99	+	.	Parent=comp141582_c0_seq1.mrna1;Target=comp141582_c0_seq1 162 1018 -
Chr2	stalkie_big_nohaplotig	exon	33683330	33683467	100	+	.	Parent=comp141582_c0_seq1.mrna1;Target=comp141582_c0_seq1 24 161 -
Chr2	stalkie_big_nohaplotig	CDS	33664712	33665171	.	+	0	Parent=comp141582_c0_seq1.mrna1;Target=comp141582_c0_seq1 162 621 .
Chr2	stalkie_big_nohaplotig	CDS	33683330	33683448	.	+	2	Parent=comp141582_c0_seq1.mrna1;Target=comp141582_c0_seq1 43 161 .
Chr2	gffcl	locus	33704932	33705161	.	+	.	ID=RLOC_00016193;geneIDs=FBgn0013467.1.path2;transcripts=FBgn0013467.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	33704932	33705161	.	+	.	ID=FBgn0013467.1.mrna2;geneID=FBgn0013467.1.path2;Name=FBgn0013467.1;Dir=indeterminatecoverage=51.5;identity=100.0;matches=230;mismatches=0;indels=0;unknowns=0;Target=FBgn0013467.1 447 218 .;locus=RLOC_00016193
Chr2	stalkie_big_nohaplotig	exon	33704932	33705161	100	+	.	Parent=FBgn0013467.1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	33704932	33705161	.	+	1	Parent=FBgn0013467.1.mrna2
Chr2	gffcl	locus	33706117	33707175	.	-	.	ID=RLOC_00016194;geneIDs=comp151722_c0_seq1.path1;transcripts=comp151722_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33706117	33707175	.	-	.	ID=comp151722_c0_seq1.mrna1;geneID=comp151722_c0_seq1.path1;Name=comp151722_c0_seq1;Dir=indeterminatecoverage=96.5;identity=98.6;matches=1044;mismatches=14;indels=1;unknowns=0;Target=comp151722_c0_seq1 1072 15 .;CDS_Target=comp151722_c0_seq1 754 644 .;locus=RLOC_00016194
Chr2	stalkie_big_nohaplotig	exon	33706117	33707175	98	-	.	Parent=comp151722_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	33706436	33706546	.	-	0	Parent=comp151722_c0_seq1.mrna1
Chr2	gffcl	locus	33711121	33712255	.	-	.	ID=RLOC_00016195;geneIDs=FBgn0033994.1.path1;transcripts=FBgn0033994.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33711121	33712255	.	-	.	ID=FBgn0033994.1.mrna1;geneID=FBgn0033994.1.path1;Name=FBgn0033994.1;Dir=sensecoverage=100.0;identity=99.7;matches=957;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016195
Chr2	stalkie_big_nohaplotig	exon	33711121	33711274	99	-	.	Parent=FBgn0033994.1.mrna1;Target=FBgn0033994.1 807 960 +
Chr2	stalkie_big_nohaplotig	exon	33711331	33711739	99	-	.	Parent=FBgn0033994.1.mrna1;Target=FBgn0033994.1 398 806 +
Chr2	stalkie_big_nohaplotig	exon	33711796	33712006	100	-	.	Parent=FBgn0033994.1.mrna1;Target=FBgn0033994.1 187 397 +
Chr2	stalkie_big_nohaplotig	exon	33712070	33712255	100	-	.	Parent=FBgn0033994.1.mrna1;Target=FBgn0033994.1 1 186 +
Chr2	stalkie_big_nohaplotig	CDS	33711121	33711274	.	-	1	Parent=FBgn0033994.1.mrna1;Target=FBgn0033994.1 807 960 +
Chr2	stalkie_big_nohaplotig	CDS	33711331	33711739	.	-	2	Parent=FBgn0033994.1.mrna1;Target=FBgn0033994.1 398 806 +
Chr2	stalkie_big_nohaplotig	CDS	33711796	33712006	.	-	0	Parent=FBgn0033994.1.mrna1;Target=FBgn0033994.1 187 397 +
Chr2	stalkie_big_nohaplotig	CDS	33712070	33712255	.	-	0	Parent=FBgn0033994.1.mrna1;Target=FBgn0033994.1 1 186 +
Chr2	gffcl	locus	33713577	33714930	.	+	.	ID=RLOC_00016196;geneIDs=FBgn0262954.1.path1;transcripts=FBgn0262954.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33713577	33714930	.	+	.	ID=FBgn0262954.1.mrna1;geneID=FBgn0262954.1.path1;Name=FBgn0262954.1;Dir=sensecoverage=100.0;identity=100.0;matches=192;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016196
Chr2	stalkie_big_nohaplotig	exon	33713577	33713655	100	+	.	Parent=FBgn0262954.1.mrna1;Target=FBgn0262954.1 1 79 +
Chr2	stalkie_big_nohaplotig	exon	33713721	33713813	100	+	.	Parent=FBgn0262954.1.mrna1;Target=FBgn0262954.1 80 172 +
Chr2	stalkie_big_nohaplotig	exon	33714911	33714930	100	+	.	Parent=FBgn0262954.1.mrna1;Target=FBgn0262954.1 173 192 +
Chr2	stalkie_big_nohaplotig	CDS	33713577	33713655	.	+	0	Parent=FBgn0262954.1.mrna1;Target=FBgn0262954.1 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	33713721	33713813	.	+	2	Parent=FBgn0262954.1.mrna1;Target=FBgn0262954.1 80 172 +
Chr2	stalkie_big_nohaplotig	CDS	33714911	33714930	.	+	2	Parent=FBgn0262954.1.mrna1;Target=FBgn0262954.1 173 192 +
Chr2	gffcl	locus	33715505	33716439	.	-	.	ID=RLOC_00016197;geneIDs=comp149539_c0_seq1.path2;transcripts=comp149539_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	33715505	33716439	.	-	.	ID=comp149539_c0_seq1.mrna2;geneID=comp149539_c0_seq1.path2;Name=comp149539_c0_seq1;Dir=indeterminatecoverage=83.8;identity=99.8;matches=933;mismatches=2;indels=0;unknowns=0;Target=comp149539_c0_seq1 1114 180 .;CDS_Target=comp149539_c0_seq1 1045 875 .;locus=RLOC_00016197
Chr2	stalkie_big_nohaplotig	exon	33715505	33716439	99	-	.	Parent=comp149539_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	33715574	33715744	.	-	0	Parent=comp149539_c0_seq1.mrna2
Chr2	gffcl	locus	33716578	33722044	.	-	.	ID=RLOC_00016198;geneIDs=FBgn0015371.1.path1;transcripts=FBgn0015371.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33716578	33722044	.	-	.	ID=FBgn0015371.1.mrna1;geneID=FBgn0015371.1.path1;Name=FBgn0015371.1;Dir=sensecoverage=99.7;identity=99.7;matches=3214;mismatches=8;indels=3;unknowns=0;locus=RLOC_00016198
Chr2	stalkie_big_nohaplotig	exon	33716578	33718342	99	-	.	Parent=FBgn0015371.1.mrna1;Target=FBgn0015371.1 1470 3231 +
Chr2	stalkie_big_nohaplotig	exon	33719232	33719534	100	-	.	Parent=FBgn0015371.1.mrna1;Target=FBgn0015371.1 1167 1469 +
Chr2	stalkie_big_nohaplotig	exon	33719637	33719786	100	-	.	Parent=FBgn0015371.1.mrna1;Target=FBgn0015371.1 1017 1166 +
Chr2	stalkie_big_nohaplotig	exon	33720658	33721617	99	-	.	Parent=FBgn0015371.1.mrna1;Target=FBgn0015371.1 57 1016 +
Chr2	stalkie_big_nohaplotig	exon	33721998	33722044	100	-	.	Parent=FBgn0015371.1.mrna1;Target=FBgn0015371.1 10 56 +
Chr2	stalkie_big_nohaplotig	CDS	33716578	33718342	.	-	1	Parent=FBgn0015371.1.mrna1;Target=FBgn0015371.1 1470 3231 +
Chr2	stalkie_big_nohaplotig	CDS	33719232	33719534	.	-	1	Parent=FBgn0015371.1.mrna1;Target=FBgn0015371.1 1167 1469 +
Chr2	stalkie_big_nohaplotig	CDS	33719637	33719786	.	-	1	Parent=FBgn0015371.1.mrna1;Target=FBgn0015371.1 1017 1166 +
Chr2	stalkie_big_nohaplotig	CDS	33720658	33721617	.	-	1	Parent=FBgn0015371.1.mrna1;Target=FBgn0015371.1 57 1016 +
Chr2	stalkie_big_nohaplotig	CDS	33721998	33722044	.	-	0	Parent=FBgn0015371.1.mrna1;Target=FBgn0015371.1 10 56 +
Chr2	gffcl	locus	33754576	33755168	.	-	.	ID=RLOC_00016199;geneIDs=Dp_FBgn0249362.path8;transcripts=Dp_FBgn0249362.mrna8
Chr2	stalkie_big_nohaplotig	mRNA	33754576	33755168	.	-	.	ID=Dp_FBgn0249362.mrna8;geneID=Dp_FBgn0249362.path8;Name=Dp_FBgn0249362;Dir=indeterminatecoverage=100.0;identity=99.3;matches=590;mismatches=3;indels=1;unknowns=0;Target=Dp_FBgn0249362 594 1 .;locus=RLOC_00016199
Chr2	stalkie_big_nohaplotig	exon	33754576	33755168	99	-	.	Parent=Dp_FBgn0249362.mrna8
Chr2	stalkie_big_nohaplotig	CDS	33754576	33755168	.	-	0	Parent=Dp_FBgn0249362.mrna8
Chr2	gffcl	locus	33797907	33798106	.	-	.	ID=RLOC_00016200;geneIDs=FBgn0013467.1.path1;transcripts=FBgn0013467.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33797907	33798106	.	-	.	ID=FBgn0013467.1.mrna1;geneID=FBgn0013467.1.path1;Name=FBgn0013467.1;Dir=indeterminatecoverage=44.7;identity=100.0;matches=200;mismatches=0;indels=0;unknowns=0;Target=FBgn0013467.1 217 18 .;CDS_Target=FBgn0013467.1 217 19 .;locus=RLOC_00016200
Chr2	stalkie_big_nohaplotig	exon	33797907	33798106	100	-	.	Parent=FBgn0013467.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	33797907	33798105	.	-	0	Parent=FBgn0013467.1.mrna1
Chr2	gffcl	locus	33847506	33850938	.	+	.	ID=RLOC_00016201;geneIDs=FBgn0000057.1.path1;transcripts=FBgn0000057.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33847506	33850938	.	+	.	ID=FBgn0000057.1.mrna1;geneID=FBgn0000057.1.path1;Name=FBgn0000057.1;Dir=sensecoverage=100.0;identity=99.9;matches=1927;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016201
Chr2	stalkie_big_nohaplotig	exon	33847506	33847545	100	+	.	Parent=FBgn0000057.1.mrna1;Target=FBgn0000057.1 1 40 +
Chr2	stalkie_big_nohaplotig	exon	33847597	33848319	99	+	.	Parent=FBgn0000057.1.mrna1;Target=FBgn0000057.1 41 763 +
Chr2	stalkie_big_nohaplotig	exon	33849773	33850938	100	+	.	Parent=FBgn0000057.1.mrna1;Target=FBgn0000057.1 764 1929 +
Chr2	stalkie_big_nohaplotig	CDS	33847506	33847545	.	+	0	Parent=FBgn0000057.1.mrna1;Target=FBgn0000057.1 1 40 +
Chr2	stalkie_big_nohaplotig	CDS	33847597	33848319	.	+	2	Parent=FBgn0000057.1.mrna1;Target=FBgn0000057.1 41 763 +
Chr2	stalkie_big_nohaplotig	CDS	33849773	33850938	.	+	2	Parent=FBgn0000057.1.mrna1;Target=FBgn0000057.1 764 1929 +
Chr2	gffcl	locus	33854626	33861118	.	-	.	ID=RLOC_00016202;geneIDs=FBgn0022238.1.path1;transcripts=FBgn0022238.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33854626	33861118	.	-	.	ID=FBgn0022238.1.mrna1;geneID=FBgn0022238.1.path1;Name=FBgn0022238.1;Dir=sensecoverage=100.0;identity=99.8;matches=476;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016202
Chr2	stalkie_big_nohaplotig	exon	33854626	33854817	99	-	.	Parent=FBgn0022238.1.mrna1;Target=FBgn0022238.1 286 477 +
Chr2	stalkie_big_nohaplotig	exon	33854886	33854972	100	-	.	Parent=FBgn0022238.1.mrna1;Target=FBgn0022238.1 199 285 +
Chr2	stalkie_big_nohaplotig	exon	33856436	33856596	100	-	.	Parent=FBgn0022238.1.mrna1;Target=FBgn0022238.1 38 198 +
Chr2	stalkie_big_nohaplotig	exon	33861082	33861118	100	-	.	Parent=FBgn0022238.1.mrna1;Target=FBgn0022238.1 1 37 +
Chr2	stalkie_big_nohaplotig	CDS	33854626	33854817	.	-	0	Parent=FBgn0022238.1.mrna1;Target=FBgn0022238.1 286 477 +
Chr2	stalkie_big_nohaplotig	CDS	33854886	33854972	.	-	0	Parent=FBgn0022238.1.mrna1;Target=FBgn0022238.1 199 285 +
Chr2	stalkie_big_nohaplotig	CDS	33856436	33856596	.	-	2	Parent=FBgn0022238.1.mrna1;Target=FBgn0022238.1 38 198 +
Chr2	stalkie_big_nohaplotig	CDS	33861082	33861118	.	-	0	Parent=FBgn0022238.1.mrna1;Target=FBgn0022238.1 1 37 +
Chr2	gffcl	locus	33856965	33857792	.	+	.	ID=RLOC_00016203;geneIDs=comp151470_c0_seq1.path1;transcripts=comp151470_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33856965	33857792	.	+	.	ID=comp151470_c0_seq1.mrna1;geneID=comp151470_c0_seq1.path1;Name=comp151470_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=828;mismatches=0;indels=0;unknowns=0;Target=comp151470_c0_seq1 828 1 .;CDS_Target=comp151470_c0_seq1 828 718 .;locus=RLOC_00016203
Chr2	stalkie_big_nohaplotig	exon	33856965	33857792	100	+	.	Parent=comp151470_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	33857682	33857792	.	+	0	Parent=comp151470_c0_seq1.mrna1
Chr2	gffcl	locus	33861514	33866238	.	-	.	ID=RLOC_00016204;geneIDs=comp149649_c1_seq1.path1;transcripts=comp149649_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33861514	33866238	.	-	.	ID=comp149649_c1_seq1.mrna1;geneID=comp149649_c1_seq1.path1;Name=comp149649_c1_seq1;Dir=antisensecoverage=99.6;identity=99.6;matches=258;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016204
Chr2	stalkie_big_nohaplotig	exon	33861514	33861565	100	-	.	Parent=comp149649_c1_seq1.mrna1;Target=comp149649_c1_seq1 1 52 -
Chr2	stalkie_big_nohaplotig	exon	33866032	33866238	99	-	.	Parent=comp149649_c1_seq1.mrna1;Target=comp149649_c1_seq1 53 259 -
Chr2	stalkie_big_nohaplotig	CDS	33861518	33861565	.	-	0	Parent=comp149649_c1_seq1.mrna1;Target=comp149649_c1_seq1 5 52 .
Chr2	stalkie_big_nohaplotig	CDS	33866032	33866067	.	-	0	Parent=comp149649_c1_seq1.mrna1;Target=comp149649_c1_seq1 53 88 .
Chr2	gffcl	locus	33867285	33870513	.	+	.	ID=RLOC_00016206;geneIDs=FBgn0034308.1.path1;transcripts=FBgn0034308.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33867285	33870513	.	+	.	ID=FBgn0034308.1.mrna1;geneID=FBgn0034308.1.path1;Name=FBgn0034308.1;Dir=sensecoverage=100.0;identity=99.6;matches=1661;mismatches=7;indels=0;unknowns=0;locus=RLOC_00016206
Chr2	stalkie_big_nohaplotig	exon	33867285	33868110	99	+	.	Parent=FBgn0034308.1.mrna1;Target=FBgn0034308.1 1 826 +
Chr2	stalkie_big_nohaplotig	exon	33868175	33868361	99	+	.	Parent=FBgn0034308.1.mrna1;Target=FBgn0034308.1 827 1013 +
Chr2	stalkie_big_nohaplotig	exon	33869594	33869718	100	+	.	Parent=FBgn0034308.1.mrna1;Target=FBgn0034308.1 1014 1138 +
Chr2	stalkie_big_nohaplotig	exon	33869984	33870513	100	+	.	Parent=FBgn0034308.1.mrna1;Target=FBgn0034308.1 1139 1668 +
Chr2	stalkie_big_nohaplotig	CDS	33867285	33868110	.	+	0	Parent=FBgn0034308.1.mrna1;Target=FBgn0034308.1 1 826 +
Chr2	stalkie_big_nohaplotig	CDS	33868175	33868361	.	+	2	Parent=FBgn0034308.1.mrna1;Target=FBgn0034308.1 827 1013 +
Chr2	stalkie_big_nohaplotig	CDS	33869594	33869718	.	+	1	Parent=FBgn0034308.1.mrna1;Target=FBgn0034308.1 1014 1138 +
Chr2	stalkie_big_nohaplotig	CDS	33869984	33870513	.	+	2	Parent=FBgn0034308.1.mrna1;Target=FBgn0034308.1 1139 1668 +
Chr2	gffcl	locus	33872601	33875550	.	-	.	ID=RLOC_00016207;geneIDs=FBgn0034310.1.path1;transcripts=FBgn0034310.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33872601	33875550	.	-	.	ID=FBgn0034310.1.mrna1;geneID=FBgn0034310.1.path1;Name=FBgn0034310.1;Dir=sensecoverage=81.8;identity=99.8;matches=1650;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016207
Chr2	stalkie_big_nohaplotig	exon	33872601	33872723	100	-	.	Parent=FBgn0034310.1.mrna1;Target=FBgn0034310.1 1900 2022 +
Chr2	stalkie_big_nohaplotig	exon	33873580	33873736	98	-	.	Parent=FBgn0034310.1.mrna1;Target=FBgn0034310.1 1743 1899 +
Chr2	stalkie_big_nohaplotig	exon	33873813	33874003	99	-	.	Parent=FBgn0034310.1.mrna1;Target=FBgn0034310.1 1552 1742 +
Chr2	stalkie_big_nohaplotig	exon	33874059	33874186	100	-	.	Parent=FBgn0034310.1.mrna1;Target=FBgn0034310.1 1424 1551 +
Chr2	stalkie_big_nohaplotig	exon	33874245	33874349	100	-	.	Parent=FBgn0034310.1.mrna1;Target=FBgn0034310.1 1319 1423 +
Chr2	stalkie_big_nohaplotig	exon	33874426	33874538	100	-	.	Parent=FBgn0034310.1.mrna1;Target=FBgn0034310.1 1206 1318 +
Chr2	stalkie_big_nohaplotig	exon	33874600	33874949	100	-	.	Parent=FBgn0034310.1.mrna1;Target=FBgn0034310.1 856 1205 +
Chr2	stalkie_big_nohaplotig	exon	33875002	33875124	100	-	.	Parent=FBgn0034310.1.mrna1;Target=FBgn0034310.1 733 855 +
Chr2	stalkie_big_nohaplotig	exon	33875188	33875550	100	-	.	Parent=FBgn0034310.1.mrna1;Target=FBgn0034310.1 370 732 +
Chr2	stalkie_big_nohaplotig	CDS	33872601	33872723	.	-	0	Parent=FBgn0034310.1.mrna1;Target=FBgn0034310.1 1900 2022 +
Chr2	stalkie_big_nohaplotig	CDS	33873580	33873736	.	-	1	Parent=FBgn0034310.1.mrna1;Target=FBgn0034310.1 1743 1899 +
Chr2	stalkie_big_nohaplotig	CDS	33873813	33874003	.	-	0	Parent=FBgn0034310.1.mrna1;Target=FBgn0034310.1 1552 1742 +
Chr2	stalkie_big_nohaplotig	CDS	33874059	33874186	.	-	2	Parent=FBgn0034310.1.mrna1;Target=FBgn0034310.1 1424 1551 +
Chr2	stalkie_big_nohaplotig	CDS	33874245	33874349	.	-	2	Parent=FBgn0034310.1.mrna1;Target=FBgn0034310.1 1319 1423 +
Chr2	stalkie_big_nohaplotig	CDS	33874426	33874538	.	-	1	Parent=FBgn0034310.1.mrna1;Target=FBgn0034310.1 1206 1318 +
Chr2	stalkie_big_nohaplotig	CDS	33874600	33874949	.	-	0	Parent=FBgn0034310.1.mrna1;Target=FBgn0034310.1 856 1205 +
Chr2	stalkie_big_nohaplotig	CDS	33875002	33875124	.	-	0	Parent=FBgn0034310.1.mrna1;Target=FBgn0034310.1 733 855 +
Chr2	stalkie_big_nohaplotig	CDS	33875188	33875550	.	-	0	Parent=FBgn0034310.1.mrna1;Target=FBgn0034310.1 370 732 +
Chr2	gffcl	locus	33880889	33892375	.	-	.	ID=RLOC_00016208;geneIDs=FBgn0000326.1.path1;transcripts=FBgn0000326.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33880889	33892375	.	-	.	ID=FBgn0000326.1.mrna1;geneID=FBgn0000326.1.path1;Name=FBgn0000326.1;Dir=sensecoverage=99.9;identity=95.1;matches=1626;mismatches=82;indels=2;unknowns=4;locus=RLOC_00016208
Chr2	stalkie_big_nohaplotig	exon	33880889	33882042	94	-	.	Parent=FBgn0000326.1.mrna1;Target=FBgn0000326.1 559 1714 +
Chr2	stalkie_big_nohaplotig	exon	33882105	33882231	96	-	.	Parent=FBgn0000326.1.mrna1;Target=FBgn0000326.1 432 558 +
Chr2	stalkie_big_nohaplotig	exon	33882290	33882510	95	-	.	Parent=FBgn0000326.1.mrna1;Target=FBgn0000326.1 211 431 +
Chr2	stalkie_big_nohaplotig	exon	33888050	33888187	96	-	.	Parent=FBgn0000326.1.mrna1;Target=FBgn0000326.1 73 210 +
Chr2	stalkie_big_nohaplotig	exon	33892304	33892375	100	-	.	Parent=FBgn0000326.1.mrna1;Target=FBgn0000326.1 1 72 +
Chr2	stalkie_big_nohaplotig	CDS	33880890	33882042	.	-	0	Parent=FBgn0000326.1.mrna1;Target=FBgn0000326.1 559 1713 +
Chr2	stalkie_big_nohaplotig	CDS	33882105	33882231	.	-	1	Parent=FBgn0000326.1.mrna1;Target=FBgn0000326.1 432 558 +
Chr2	stalkie_big_nohaplotig	CDS	33882290	33882510	.	-	0	Parent=FBgn0000326.1.mrna1;Target=FBgn0000326.1 211 431 +
Chr2	stalkie_big_nohaplotig	CDS	33888050	33888187	.	-	0	Parent=FBgn0000326.1.mrna1;Target=FBgn0000326.1 73 210 +
Chr2	stalkie_big_nohaplotig	CDS	33892304	33892375	.	-	0	Parent=FBgn0000326.1.mrna1;Target=FBgn0000326.1 1 72 +
Chr2	gffcl	locus	33886324	33891120	.	-	.	ID=RLOC_00016209;geneIDs=comp163609_c0_seq1.path1;transcripts=comp163609_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33886324	33891120	.	-	.	ID=comp163609_c0_seq1.mrna1;geneID=comp163609_c0_seq1.path1;Name=comp163609_c0_seq1;Dir=sensecoverage=72.1;identity=96.2;matches=790;mismatches=31;indels=0;unknowns=0;locus=RLOC_00016209
Chr2	stalkie_big_nohaplotig	exon	33886324	33886876	94	-	.	Parent=comp163609_c0_seq1.mrna1;Target=comp163609_c0_seq1 269 821 +
Chr2	stalkie_big_nohaplotig	exon	33890853	33891120	99	-	.	Parent=comp163609_c0_seq1.mrna1;Target=comp163609_c0_seq1 1 268 +
Chr2	stalkie_big_nohaplotig	CDS	33886350	33886876	.	-	2	Parent=comp163609_c0_seq1.mrna1;Target=comp163609_c0_seq1 269 795 +
Chr2	stalkie_big_nohaplotig	CDS	33890853	33891120	.	-	0	Parent=comp163609_c0_seq1.mrna1;Target=comp163609_c0_seq1 1 268 +
Chr2	gffcl	locus	33889463	33901349	.	-	.	ID=RLOC_00016210;geneIDs=comp157451_c1_seq1.path1;transcripts=comp157451_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33889463	33901349	.	-	.	ID=comp157451_c1_seq1.mrna1;geneID=comp157451_c1_seq1.path1;Name=comp157451_c1_seq1;Dir=indeterminatecoverage=98.3;identity=97.5;matches=812;mismatches=18;indels=3;unknowns=0;Target=comp157451_c1_seq1 172 149 .;locus=RLOC_00016210
Chr2	stalkie_big_nohaplotig	exon	33889463	33889678	96	-	.	Parent=comp157451_c1_seq1.mrna1;Target=comp157451_c1_seq1 845 632 .
Chr2	stalkie_big_nohaplotig	exon	33896096	33896119	91	-	.	Parent=comp157451_c1_seq1.mrna1;Target=comp157451_c1_seq1 631 608 .
Chr2	stalkie_big_nohaplotig	exon	33900758	33901349	97	-	.	Parent=comp157451_c1_seq1.mrna1;Target=comp157451_c1_seq1 607 15 .
Chr2	stalkie_big_nohaplotig	CDS	33901193	33901216	.	-	0	Parent=comp157451_c1_seq1.mrna1
Chr2	gffcl	locus	33917681	33918452	.	+	.	ID=RLOC_00016211;geneIDs=FBgn0054038.1.path1;transcripts=FBgn0054038.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33917681	33918452	.	+	.	ID=FBgn0054038.1.mrna1;geneID=FBgn0054038.1.path1;Name=FBgn0054038.1;Dir=sensecoverage=95.9;identity=99.8;matches=626;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016211
Chr2	stalkie_big_nohaplotig	exon	33917681	33917873	99	+	.	Parent=FBgn0054038.1.mrna1;Target=FBgn0054038.1 28 220 +
Chr2	stalkie_big_nohaplotig	exon	33917949	33918219	100	+	.	Parent=FBgn0054038.1.mrna1;Target=FBgn0054038.1 221 491 +
Chr2	stalkie_big_nohaplotig	exon	33918290	33918452	100	+	.	Parent=FBgn0054038.1.mrna1;Target=FBgn0054038.1 492 654 +
Chr2	stalkie_big_nohaplotig	CDS	33917681	33917873	.	+	0	Parent=FBgn0054038.1.mrna1;Target=FBgn0054038.1 28 220 +
Chr2	stalkie_big_nohaplotig	CDS	33917949	33918219	.	+	2	Parent=FBgn0054038.1.mrna1;Target=FBgn0054038.1 221 491 +
Chr2	stalkie_big_nohaplotig	CDS	33918290	33918452	.	+	1	Parent=FBgn0054038.1.mrna1;Target=FBgn0054038.1 492 654 +
Chr2	gffcl	locus	33975113	33978537	.	+	.	ID=RLOC_00016212;geneIDs=FBgn0035094.1.path1;transcripts=FBgn0035094.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	33975113	33978537	.	+	.	ID=FBgn0035094.1.mrna1;geneID=FBgn0035094.1.path1;Name=FBgn0035094.1;Dir=sensecoverage=100.0;identity=99.7;matches=2572;mismatches=8;indels=0;unknowns=0;locus=RLOC_00016212
Chr2	stalkie_big_nohaplotig	exon	33975113	33976523	99	+	.	Parent=FBgn0035094.1.mrna1;Target=FBgn0035094.1 1 1411 +
Chr2	stalkie_big_nohaplotig	exon	33977179	33977317	99	+	.	Parent=FBgn0035094.1.mrna1;Target=FBgn0035094.1 1412 1550 +
Chr2	stalkie_big_nohaplotig	exon	33977379	33977521	99	+	.	Parent=FBgn0035094.1.mrna1;Target=FBgn0035094.1 1551 1693 +
Chr2	stalkie_big_nohaplotig	exon	33977589	33977933	99	+	.	Parent=FBgn0035094.1.mrna1;Target=FBgn0035094.1 1694 2038 +
Chr2	stalkie_big_nohaplotig	exon	33977996	33978537	99	+	.	Parent=FBgn0035094.1.mrna1;Target=FBgn0035094.1 2039 2580 +
Chr2	stalkie_big_nohaplotig	CDS	33975113	33976523	.	+	0	Parent=FBgn0035094.1.mrna1;Target=FBgn0035094.1 1 1411 +
Chr2	stalkie_big_nohaplotig	CDS	33977179	33977317	.	+	2	Parent=FBgn0035094.1.mrna1;Target=FBgn0035094.1 1412 1550 +
Chr2	stalkie_big_nohaplotig	CDS	33977379	33977521	.	+	1	Parent=FBgn0035094.1.mrna1;Target=FBgn0035094.1 1551 1693 +
Chr2	stalkie_big_nohaplotig	CDS	33977589	33977933	.	+	2	Parent=FBgn0035094.1.mrna1;Target=FBgn0035094.1 1694 2038 +
Chr2	stalkie_big_nohaplotig	CDS	33977996	33978537	.	+	2	Parent=FBgn0035094.1.mrna1;Target=FBgn0035094.1 2039 2580 +
Chr2	gffcl	locus	34165387	36006501	.	-	.	ID=RLOC_00016213;geneIDs=comp155302_c0_seq1.path1;transcripts=comp155302_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34165387	36006501	.	-	.	ID=comp155302_c0_seq1.mrna1;geneID=comp155302_c0_seq1.path1;Name=comp155302_c0_seq1;Dir=sensecoverage=62.9;identity=99.5;matches=599;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016213
Chr2	stalkie_big_nohaplotig	exon	34165387	34165395	100	-	.	Parent=comp155302_c0_seq1.mrna1;Target=comp155302_c0_seq1 595 603 +
Chr2	stalkie_big_nohaplotig	exon	34165907	34165921	100	-	.	Parent=comp155302_c0_seq1.mrna1;Target=comp155302_c0_seq1 580 594 +
Chr2	stalkie_big_nohaplotig	exon	34173662	34173668	100	-	.	Parent=comp155302_c0_seq1.mrna1;Target=comp155302_c0_seq1 573 579 +
Chr2	stalkie_big_nohaplotig	exon	34180095	34180100	100	-	.	Parent=comp155302_c0_seq1.mrna1;Target=comp155302_c0_seq1 567 572 +
Chr2	stalkie_big_nohaplotig	exon	36005803	36006037	100	-	.	Parent=comp155302_c0_seq1.mrna1;Target=comp155302_c0_seq1 332 566 +
Chr2	stalkie_big_nohaplotig	exon	36006105	36006221	100	-	.	Parent=comp155302_c0_seq1.mrna1;Target=comp155302_c0_seq1 215 331 +
Chr2	stalkie_big_nohaplotig	exon	36006289	36006501	98	-	.	Parent=comp155302_c0_seq1.mrna1;Target=comp155302_c0_seq1 2 214 +
Chr2	stalkie_big_nohaplotig	CDS	36005807	36006037	.	-	0	Parent=comp155302_c0_seq1.mrna1;Target=comp155302_c0_seq1 332 562 +
Chr2	stalkie_big_nohaplotig	CDS	36006105	36006221	.	-	0	Parent=comp155302_c0_seq1.mrna1;Target=comp155302_c0_seq1 215 331 +
Chr2	stalkie_big_nohaplotig	CDS	36006289	36006402	.	-	0	Parent=comp155302_c0_seq1.mrna1;Target=comp155302_c0_seq1 101 214 +
Chr2	gffcl	locus	34185624	34187456	.	+	.	ID=RLOC_00016214;geneIDs=FBgn0003715.path1;transcripts=FBgn0003715.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34185624	34187456	.	+	.	ID=FBgn0003715.mrna1;geneID=FBgn0003715.path1;Name=FBgn0003715;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1833;mismatches=0;indels=0;unknowns=0;Target=FBgn0003715 1833 1 .;locus=RLOC_00016214
Chr2	stalkie_big_nohaplotig	exon	34185624	34187456	100	+	.	Parent=FBgn0003715.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34185624	34187456	.	+	0	Parent=FBgn0003715.mrna1
Chr2	gffcl	locus	34217867	35986457	.	.	.	ID=RLOC_00016215;geneIDs=comp143098_c0_seq1.path1,comp161463_c0_seq1.path1;transcripts=comp161463_c0_seq1.mrna1,comp143098_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34217867	35986457	.	-	.	ID=comp161463_c0_seq1.mrna1;geneID=comp161463_c0_seq1.path1;Name=comp161463_c0_seq1;Dir=antisensecoverage=92.5;identity=87.2;matches=1201;mismatches=100;indels=77;unknowns=0;Target=comp161463_c0_seq1 530 715 .;locus=RLOC_00016215
Chr2	stalkie_big_nohaplotig	exon	34217867	34218643	94	-	.	Parent=comp161463_c0_seq1.mrna1;Target=comp161463_c0_seq1 7 768 -
Chr2	stalkie_big_nohaplotig	exon	34244773	34245049	98	-	.	Parent=comp161463_c0_seq1.mrna1;Target=comp161463_c0_seq1 769 1045 -
Chr2	stalkie_big_nohaplotig	exon	35871201	35871211	100	-	.	Parent=comp161463_c0_seq1.mrna1;Target=comp161463_c0_seq1 1046 1056 -
Chr2	stalkie_big_nohaplotig	exon	35888507	35888568	48	-	.	Parent=comp161463_c0_seq1.mrna1;Target=comp161463_c0_seq1 1082 1141 -
Chr2	stalkie_big_nohaplotig	exon	35891612	35891634	56	-	.	Parent=comp161463_c0_seq1.mrna1;Target=comp161463_c0_seq1 1142 1164 -
Chr2	stalkie_big_nohaplotig	exon	35891746	35891820	54	-	.	Parent=comp161463_c0_seq1.mrna1;Target=comp161463_c0_seq1 1165 1240 -
Chr2	stalkie_big_nohaplotig	exon	35895409	35895418	100	-	.	Parent=comp161463_c0_seq1.mrna1;Target=comp161463_c0_seq1 1242 1251 -
Chr2	stalkie_big_nohaplotig	exon	35922765	35922808	48	-	.	Parent=comp161463_c0_seq1.mrna1;Target=comp161463_c0_seq1 1252 1319 -
Chr2	stalkie_big_nohaplotig	exon	35927658	35927675	51	-	.	Parent=comp161463_c0_seq1.mrna1;Target=comp161463_c0_seq1 1320 1350 -
Chr2	stalkie_big_nohaplotig	exon	35933263	35933272	100	-	.	Parent=comp161463_c0_seq1.mrna1;Target=comp161463_c0_seq1 1351 1360 -
Chr2	stalkie_big_nohaplotig	exon	35942796	35942799	100	-	.	Parent=comp161463_c0_seq1.mrna1;Target=comp161463_c0_seq1 1361 1364 -
Chr2	stalkie_big_nohaplotig	exon	35957807	35957810	100	-	.	Parent=comp161463_c0_seq1.mrna1;Target=comp161463_c0_seq1 1365 1368 -
Chr2	stalkie_big_nohaplotig	exon	35986445	35986457	100	-	.	Parent=comp161463_c0_seq1.mrna1;Target=comp161463_c0_seq1 1369 1381 -
Chr2	stalkie_big_nohaplotig	CDS	34218406	34218590	.	-	0	Parent=comp161463_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35932871	35933587	.	+	.	ID=comp143098_c0_seq1.mrna1;geneID=comp143098_c0_seq1.path1;Name=comp143098_c0_seq1;Dir=indeterminatecoverage=98.1;identity=99.6;matches=714;mismatches=3;indels=0;unknowns=0;Target=comp143098_c0_seq1 717 1 .;CDS_Target=comp143098_c0_seq1 87 1 .;locus=RLOC_00016215
Chr2	stalkie_big_nohaplotig	exon	35932871	35933587	99	+	.	Parent=comp143098_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35932871	35932957	.	+	0	Parent=comp143098_c0_seq1.mrna1
Chr2	gffcl	locus	34290359	34292153	.	-	.	ID=RLOC_00016216;geneIDs=FBgn0035600.1.path1;transcripts=FBgn0035600.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34290359	34292153	.	-	.	ID=FBgn0035600.1.mrna1;geneID=FBgn0035600.1.path1;Name=FBgn0035600.1;Dir=sensecoverage=100.0;identity=99.9;matches=1070;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016216
Chr2	stalkie_big_nohaplotig	exon	34290359	34290583	100	-	.	Parent=FBgn0035600.1.mrna1;Target=FBgn0035600.1 847 1071 +
Chr2	stalkie_big_nohaplotig	exon	34290646	34290939	99	-	.	Parent=FBgn0035600.1.mrna1;Target=FBgn0035600.1 553 846 +
Chr2	stalkie_big_nohaplotig	exon	34291006	34291138	100	-	.	Parent=FBgn0035600.1.mrna1;Target=FBgn0035600.1 420 552 +
Chr2	stalkie_big_nohaplotig	exon	34291205	34291353	100	-	.	Parent=FBgn0035600.1.mrna1;Target=FBgn0035600.1 271 419 +
Chr2	stalkie_big_nohaplotig	exon	34291535	34291582	100	-	.	Parent=FBgn0035600.1.mrna1;Target=FBgn0035600.1 223 270 +
Chr2	stalkie_big_nohaplotig	exon	34291932	34292153	100	-	.	Parent=FBgn0035600.1.mrna1;Target=FBgn0035600.1 1 222 +
Chr2	stalkie_big_nohaplotig	CDS	34290359	34290583	.	-	0	Parent=FBgn0035600.1.mrna1;Target=FBgn0035600.1 847 1071 +
Chr2	stalkie_big_nohaplotig	CDS	34290646	34290939	.	-	0	Parent=FBgn0035600.1.mrna1;Target=FBgn0035600.1 553 846 +
Chr2	stalkie_big_nohaplotig	CDS	34291006	34291138	.	-	1	Parent=FBgn0035600.1.mrna1;Target=FBgn0035600.1 420 552 +
Chr2	stalkie_big_nohaplotig	CDS	34291205	34291353	.	-	0	Parent=FBgn0035600.1.mrna1;Target=FBgn0035600.1 271 419 +
Chr2	stalkie_big_nohaplotig	CDS	34291535	34291582	.	-	0	Parent=FBgn0035600.1.mrna1;Target=FBgn0035600.1 223 270 +
Chr2	stalkie_big_nohaplotig	CDS	34291932	34292153	.	-	0	Parent=FBgn0035600.1.mrna1;Target=FBgn0035600.1 1 222 +
Chr2	gffcl	locus	34294270	34298001	.	+	.	ID=RLOC_00016217;geneIDs=FBgn0035461.1.path1;transcripts=FBgn0035461.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34294270	34298001	.	+	.	ID=FBgn0035461.1.mrna1;geneID=FBgn0035461.1.path1;Name=FBgn0035461.1;Dir=sensecoverage=100.0;identity=99.6;matches=995;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016217
Chr2	stalkie_big_nohaplotig	exon	34294270	34294438	100	+	.	Parent=FBgn0035461.1.mrna1;Target=FBgn0035461.1 1 169 +
Chr2	stalkie_big_nohaplotig	exon	34297172	34298001	99	+	.	Parent=FBgn0035461.1.mrna1;Target=FBgn0035461.1 170 999 +
Chr2	stalkie_big_nohaplotig	CDS	34294270	34294438	.	+	0	Parent=FBgn0035461.1.mrna1;Target=FBgn0035461.1 1 169 +
Chr2	stalkie_big_nohaplotig	CDS	34297172	34298001	.	+	2	Parent=FBgn0035461.1.mrna1;Target=FBgn0035461.1 170 999 +
Chr2	gffcl	locus	34351212	34355260	.	-	.	ID=RLOC_00016218;geneIDs=FBgn0033985.1.path2,comp156837_c0_seq1.path1;transcripts=FBgn0033985.1.mrna2,comp156837_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34351212	34352056	.	-	.	ID=FBgn0033985.1.mrna2;geneID=FBgn0033985.1.path2;Name=FBgn0033985.1;Dir=sensecoverage=100.0;identity=99.4;matches=692;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016218
Chr2	stalkie_big_nohaplotig	exon	34351212	34351397	99	-	.	Parent=FBgn0033985.1.mrna2;Target=FBgn0033985.1 511 696 +
Chr2	stalkie_big_nohaplotig	exon	34351475	34351747	99	-	.	Parent=FBgn0033985.1.mrna2;Target=FBgn0033985.1 238 510 +
Chr2	stalkie_big_nohaplotig	exon	34351820	34352056	99	-	.	Parent=FBgn0033985.1.mrna2;Target=FBgn0033985.1 1 237 +
Chr2	stalkie_big_nohaplotig	CDS	34351212	34351397	.	-	0	Parent=FBgn0033985.1.mrna2;Target=FBgn0033985.1 511 696 +
Chr2	stalkie_big_nohaplotig	CDS	34351475	34351747	.	-	0	Parent=FBgn0033985.1.mrna2;Target=FBgn0033985.1 238 510 +
Chr2	stalkie_big_nohaplotig	CDS	34351820	34352056	.	-	0	Parent=FBgn0033985.1.mrna2;Target=FBgn0033985.1 1 237 +
Chr2	stalkie_big_nohaplotig	mRNA	34352033	34355260	.	-	.	ID=comp156837_c0_seq1.mrna1;geneID=comp156837_c0_seq1.path1;Name=comp156837_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=809;mismatches=5;indels=0;unknowns=0;Target=comp156837_c0_seq1 310 456 .;locus=RLOC_00016218
Chr2	stalkie_big_nohaplotig	exon	34352033	34352056	100	-	.	Parent=comp156837_c0_seq1.mrna1;Target=comp156837_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	exon	34354471	34355260	99	-	.	Parent=comp156837_c0_seq1.mrna1;Target=comp156837_c0_seq1 25 814 -
Chr2	stalkie_big_nohaplotig	CDS	34354756	34354902	.	-	0	Parent=comp156837_c0_seq1.mrna1
Chr2	gffcl	locus	34421212	34422875	.	+	.	ID=RLOC_00016219;geneIDs=FBgn0004055.1.path1;transcripts=FBgn0004055.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34421212	34422875	.	+	.	ID=FBgn0004055.1.mrna1;geneID=FBgn0004055.1.path1;Name=FBgn0004055.1;Dir=sensecoverage=100.0;identity=99.7;matches=1522;mismatches=3;indels=2;unknowns=0;locus=RLOC_00016219
Chr2	stalkie_big_nohaplotig	exon	34421212	34421987	99	+	.	Parent=FBgn0004055.1.mrna1;Target=FBgn0004055.1 1 778 +
Chr2	stalkie_big_nohaplotig	exon	34422061	34422410	100	+	.	Parent=FBgn0004055.1.mrna1;Target=FBgn0004055.1 779 1128 +
Chr2	stalkie_big_nohaplotig	exon	34422477	34422875	100	+	.	Parent=FBgn0004055.1.mrna1;Target=FBgn0004055.1 1129 1527 +
Chr2	stalkie_big_nohaplotig	CDS	34421258	34421987	.	+	0	Parent=FBgn0004055.1.mrna1;Target=FBgn0004055.1 49 778 +
Chr2	stalkie_big_nohaplotig	CDS	34422061	34422410	.	+	2	Parent=FBgn0004055.1.mrna1;Target=FBgn0004055.1 779 1128 +
Chr2	stalkie_big_nohaplotig	CDS	34422477	34422875	.	+	0	Parent=FBgn0004055.1.mrna1;Target=FBgn0004055.1 1129 1527 +
Chr2	gffcl	locus	34423969	34424508	.	+	.	ID=RLOC_00016220;geneIDs=comp145876_c0_seq1.path1;transcripts=comp145876_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34423969	34424508	.	+	.	ID=comp145876_c0_seq1.mrna1;geneID=comp145876_c0_seq1.path1;Name=comp145876_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=537;mismatches=3;indels=6;unknowns=0;Target=comp145876_c0_seq1 546 1 .;CDS_Target=comp145876_c0_seq1 177 106 .;locus=RLOC_00016220
Chr2	stalkie_big_nohaplotig	exon	34423969	34424508	98	+	.	Parent=comp145876_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34424074	34424145	.	+	0	Parent=comp145876_c0_seq1.mrna1
Chr2	gffcl	locus	34424717	34424923	.	+	.	ID=RLOC_00016221;geneIDs=comp145254_c0_seq1.path1;transcripts=comp145254_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34424717	34424923	.	+	.	ID=comp145254_c0_seq1.mrna1;geneID=comp145254_c0_seq1.path1;Name=comp145254_c0_seq1;Dir=indeterminatecoverage=99.5;identity=100.0;matches=207;mismatches=0;indels=0;unknowns=0;Target=comp145254_c0_seq1 207 1 .;CDS_Target=comp145254_c0_seq1 99 1 .;locus=RLOC_00016221
Chr2	stalkie_big_nohaplotig	exon	34424717	34424923	100	+	.	Parent=comp145254_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34424717	34424815	.	+	0	Parent=comp145254_c0_seq1.mrna1
Chr2	gffcl	locus	34425238	34425849	.	+	.	ID=RLOC_00016222;geneIDs=comp136723_c0_seq1.path1;transcripts=comp136723_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34425238	34425849	.	+	.	ID=comp136723_c0_seq1.mrna1;geneID=comp136723_c0_seq1.path1;Name=comp136723_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=611;mismatches=1;indels=0;unknowns=0;Target=comp136723_c0_seq1 612 1 .;CDS_Target=comp136723_c0_seq1 447 286 .;locus=RLOC_00016222
Chr2	stalkie_big_nohaplotig	exon	34425238	34425849	99	+	.	Parent=comp136723_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34425523	34425684	.	+	0	Parent=comp136723_c0_seq1.mrna1
Chr2	gffcl	locus	34427752	34428783	.	+	.	ID=RLOC_00016223;geneIDs=comp156535_c0_seq1.path1;transcripts=comp156535_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34427752	34428783	.	+	.	ID=comp156535_c0_seq1.mrna1;geneID=comp156535_c0_seq1.path1;Name=comp156535_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1031;mismatches=1;indels=0;unknowns=0;Target=comp156535_c0_seq1 1032 1 .;CDS_Target=comp156535_c0_seq1 258 157 .;locus=RLOC_00016223
Chr2	stalkie_big_nohaplotig	exon	34427752	34428783	99	+	.	Parent=comp156535_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34427908	34428009	.	+	0	Parent=comp156535_c0_seq1.mrna1
Chr2	gffcl	locus	34428842	34429350	.	+	.	ID=RLOC_00016224;geneIDs=comp153600_c0_seq1.path1;transcripts=comp153600_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34428842	34429350	.	+	.	ID=comp153600_c0_seq1.mrna1;geneID=comp153600_c0_seq1.path1;Name=comp153600_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.2;matches=505;mismatches=4;indels=0;unknowns=0;Target=comp153600_c0_seq1 509 1 .;CDS_Target=comp153600_c0_seq1 142 2 .;locus=RLOC_00016224
Chr2	stalkie_big_nohaplotig	exon	34428842	34429350	99	+	.	Parent=comp153600_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34428843	34428983	.	+	0	Parent=comp153600_c0_seq1.mrna1
Chr2	gffcl	locus	34429666	34430148	.	-	.	ID=RLOC_00016225;geneIDs=comp151510_c0_seq1.path1;transcripts=comp151510_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34429666	34430148	.	-	.	ID=comp151510_c0_seq1.mrna1;geneID=comp151510_c0_seq1.path1;Name=comp151510_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=479;mismatches=4;indels=0;unknowns=0;Target=comp151510_c0_seq1 483 1 .;CDS_Target=comp151510_c0_seq1 276 196 .;locus=RLOC_00016225
Chr2	stalkie_big_nohaplotig	exon	34429666	34430148	99	-	.	Parent=comp151510_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34429873	34429953	.	-	0	Parent=comp151510_c0_seq1.mrna1
Chr2	gffcl	locus	34431738	34432273	.	+	.	ID=RLOC_00016226;geneIDs=comp149607_c0_seq1.path1;transcripts=comp149607_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34431738	34432273	.	+	.	ID=comp149607_c0_seq1.mrna1;geneID=comp149607_c0_seq1.path1;Name=comp149607_c0_seq1;Dir=indeterminatecoverage=96.6;identity=99.8;matches=536;mismatches=0;indels=1;unknowns=0;Target=comp149607_c0_seq1 540 4 .;CDS_Target=comp149607_c0_seq1 179 111 .;locus=RLOC_00016226
Chr2	stalkie_big_nohaplotig	exon	34431738	34432273	99	+	.	Parent=comp149607_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34431844	34431912	.	+	0	Parent=comp149607_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36459582	36460192	.	-	.	ID=comp152989_c0_seq1.mrna1;geneID=comp152989_c0_seq1.path1;Name=comp152989_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.2;matches=607;mismatches=4;indels=1;unknowns=0;Target=comp152989_c0_seq1 617 6 .;CDS_Target=comp152989_c0_seq1 102 79 .;locus=RLOC_00016227
Chr2	stalkie_big_nohaplotig	exon	36459582	36460192	99	-	.	Parent=comp152989_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36460097	36460119	.	-	0	Parent=comp152989_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36463888	36464386	.	+	.	ID=comp155352_c0_seq1.mrna1;geneID=comp155352_c0_seq1.path1;Name=comp155352_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.2;matches=497;mismatches=2;indels=2;unknowns=0;Target=comp155352_c0_seq1 502 2 .;CDS_Target=comp155352_c0_seq1 440 378 .;locus=RLOC_00016227
Chr2	stalkie_big_nohaplotig	exon	36463888	36464386	99	+	.	Parent=comp155352_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36464264	36464325	.	+	0	Parent=comp155352_c0_seq1.mrna1
Chr2	gffcl	locus	34489414	34489797	.	-	.	ID=RLOC_00016228;geneIDs=comp151076_c1_seq1.path1;transcripts=comp151076_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34489414	34489797	.	-	.	ID=comp151076_c1_seq1.mrna1;geneID=comp151076_c1_seq1.path1;Name=comp151076_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=384;mismatches=0;indels=0;unknowns=0;Target=comp151076_c1_seq1 384 1 .;CDS_Target=comp151076_c1_seq1 382 293 .;locus=RLOC_00016228
Chr2	stalkie_big_nohaplotig	exon	34489414	34489797	100	-	.	Parent=comp151076_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34489416	34489505	.	-	0	Parent=comp151076_c1_seq1.mrna1
Chr2	gffcl	locus	34490091	34490354	.	-	.	ID=RLOC_00016229;geneIDs=comp135833_c0_seq1.path1;transcripts=comp135833_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34490091	34490354	.	-	.	ID=comp135833_c0_seq1.mrna1;geneID=comp135833_c0_seq1.path1;Name=comp135833_c0_seq1;Dir=indeterminatecoverage=97.4;identity=100.0;matches=264;mismatches=0;indels=0;unknowns=0;Target=comp135833_c0_seq1 271 8 .;CDS_Target=comp135833_c0_seq1 73 8 .;locus=RLOC_00016229
Chr2	stalkie_big_nohaplotig	exon	34490091	34490354	100	-	.	Parent=comp135833_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34490289	34490354	.	-	0	Parent=comp135833_c0_seq1.mrna1
Chr2	gffcl	locus	34494037	34494420	.	-	.	ID=RLOC_00016230;geneIDs=comp151076_c1_seq1.path2;transcripts=comp151076_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	34494037	34494420	.	-	.	ID=comp151076_c1_seq1.mrna2;geneID=comp151076_c1_seq1.path2;Name=comp151076_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=384;mismatches=0;indels=0;unknowns=0;Target=comp151076_c1_seq1 384 1 .;CDS_Target=comp151076_c1_seq1 382 293 .;locus=RLOC_00016230
Chr2	stalkie_big_nohaplotig	exon	34494037	34494420	100	-	.	Parent=comp151076_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	34494039	34494128	.	-	0	Parent=comp151076_c1_seq1.mrna2
Chr2	gffcl	locus	34494714	34494977	.	-	.	ID=RLOC_00016231;geneIDs=comp135833_c0_seq1.path2;transcripts=comp135833_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	34494714	34494977	.	-	.	ID=comp135833_c0_seq1.mrna2;geneID=comp135833_c0_seq1.path2;Name=comp135833_c0_seq1;Dir=indeterminatecoverage=97.4;identity=100.0;matches=264;mismatches=0;indels=0;unknowns=0;Target=comp135833_c0_seq1 271 8 .;CDS_Target=comp135833_c0_seq1 73 8 .;locus=RLOC_00016231
Chr2	stalkie_big_nohaplotig	exon	34494714	34494977	100	-	.	Parent=comp135833_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	34494912	34494977	.	-	0	Parent=comp135833_c0_seq1.mrna2
Chr2	gffcl	locus	34542555	34543818	.	+	.	ID=RLOC_00016232;geneIDs=comp117629_c0_seq1.path1;transcripts=comp117629_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34542555	34543818	.	+	.	ID=comp117629_c0_seq1.mrna1;geneID=comp117629_c0_seq1.path1;Name=comp117629_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.1;matches=1253;mismatches=11;indels=1;unknowns=0;Target=comp117629_c0_seq1 1279 15 .;CDS_Target=comp117629_c0_seq1 1098 904 .;locus=RLOC_00016232
Chr2	stalkie_big_nohaplotig	exon	34542555	34543818	99	+	.	Parent=comp117629_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34543443	34543637	.	+	0	Parent=comp117629_c0_seq1.mrna1
Chr2	gffcl	locus	34610242	34611086	.	+	.	ID=RLOC_00016233;geneIDs=FBgn0033985.1.path1;transcripts=FBgn0033985.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34610242	34611086	.	+	.	ID=FBgn0033985.1.mrna1;geneID=FBgn0033985.1.path1;Name=FBgn0033985.1;Dir=sensecoverage=100.0;identity=99.9;matches=695;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016233
Chr2	stalkie_big_nohaplotig	exon	34610242	34610478	100	+	.	Parent=FBgn0033985.1.mrna1;Target=FBgn0033985.1 1 237 +
Chr2	stalkie_big_nohaplotig	exon	34610551	34610823	99	+	.	Parent=FBgn0033985.1.mrna1;Target=FBgn0033985.1 238 510 +
Chr2	stalkie_big_nohaplotig	exon	34610901	34611086	100	+	.	Parent=FBgn0033985.1.mrna1;Target=FBgn0033985.1 511 696 +
Chr2	stalkie_big_nohaplotig	CDS	34610242	34610478	.	+	0	Parent=FBgn0033985.1.mrna1;Target=FBgn0033985.1 1 237 +
Chr2	stalkie_big_nohaplotig	CDS	34610551	34610823	.	+	0	Parent=FBgn0033985.1.mrna1;Target=FBgn0033985.1 238 510 +
Chr2	stalkie_big_nohaplotig	CDS	34610901	34611086	.	+	0	Parent=FBgn0033985.1.mrna1;Target=FBgn0033985.1 511 696 +
Chr2	gffcl	locus	34610428	35388829	.	-	.	ID=RLOC_00016234;geneIDs=comp152821_c1_seq1.path1;transcripts=comp152821_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34610428	35388829	.	-	.	ID=comp152821_c1_seq1.mrna1;geneID=comp152821_c1_seq1.path1;Name=comp152821_c1_seq1;Dir=indeterminatecoverage=93.2;identity=99.1;matches=773;mismatches=3;indels=4;unknowns=0;Target=comp152821_c1_seq1 333 214 .;locus=RLOC_00016234
Chr2	stalkie_big_nohaplotig	exon	34610428	34610434	100	-	.	Parent=comp152821_c1_seq1.mrna1;Target=comp152821_c1_seq1 780 774 .
Chr2	stalkie_big_nohaplotig	exon	34611623	34611631	88	-	.	Parent=comp152821_c1_seq1.mrna1;Target=comp152821_c1_seq1 773 765 .
Chr2	stalkie_big_nohaplotig	exon	34619674	34619678	100	-	.	Parent=comp152821_c1_seq1.mrna1;Target=comp152821_c1_seq1 764 760 .
Chr2	stalkie_big_nohaplotig	exon	34622590	34622591	100	-	.	Parent=comp152821_c1_seq1.mrna1;Target=comp152821_c1_seq1 759 758 .
Chr2	stalkie_big_nohaplotig	exon	34628608	34628610	100	-	.	Parent=comp152821_c1_seq1.mrna1;Target=comp152821_c1_seq1 757 755 .
Chr2	stalkie_big_nohaplotig	exon	34641998	34642001	100	-	.	Parent=comp152821_c1_seq1.mrna1;Target=comp152821_c1_seq1 754 751 .
Chr2	stalkie_big_nohaplotig	exon	35388084	35388829	99	-	.	Parent=comp152821_c1_seq1.mrna1;Target=comp152821_c1_seq1 750 1 .
Chr2	stalkie_big_nohaplotig	CDS	35388497	35388616	.	-	0	Parent=comp152821_c1_seq1.mrna1
Chr2	gffcl	locus	34622602	34622812	.	-	.	ID=RLOC_00016235;geneIDs=comp47000_c0_seq1.path1;transcripts=comp47000_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34622602	34622812	.	-	.	ID=comp47000_c0_seq1.mrna1;geneID=comp47000_c0_seq1.path1;Name=comp47000_c0_seq1;Dir=indeterminatecoverage=67.4;identity=100.0;matches=211;mismatches=0;indels=0;unknowns=0;Target=comp47000_c0_seq1 291 81 .;CDS_Target=comp47000_c0_seq1 248 81 .;locus=RLOC_00016235
Chr2	stalkie_big_nohaplotig	exon	34622602	34622812	100	-	.	Parent=comp47000_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34622645	34622812	.	-	0	Parent=comp47000_c0_seq1.mrna1
Chr2	gffcl	locus	34623557	34623606	.	-	.	ID=RLOC_00016236;geneIDs=ORF737.path2;transcripts=ORF737.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	34623557	34623606	.	-	.	ID=ORF737.mrna2;geneID=ORF737.path2;Name=ORF737;Dir=indeterminatecoverage=3.4;identity=100.0;matches=50;mismatches=0;indels=0;unknowns=0;Target=ORF737 1476 1427 .;locus=RLOC_00016236
Chr2	stalkie_big_nohaplotig	exon	34623557	34623606	100	-	.	Parent=ORF737.mrna2
Chr2	stalkie_big_nohaplotig	CDS	34623557	34623606	.	-	1	Parent=ORF737.mrna2
Chr2	gffcl	locus	34626671	34664915	.	-	.	ID=RLOC_00016237;geneIDs=FBgn0261854.1.path1;transcripts=FBgn0261854.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34626671	34664915	.	-	.	ID=FBgn0261854.1.mrna1;geneID=FBgn0261854.1.path1;Name=FBgn0261854.1;Dir=sensecoverage=100.0;identity=99.9;matches=1811;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016237
Chr2	stalkie_big_nohaplotig	exon	34626671	34626755	100	-	.	Parent=FBgn0261854.1.mrna1;Target=FBgn0261854.1 1758 1842 +
Chr2	stalkie_big_nohaplotig	exon	34627920	34628041	100	-	.	Parent=FBgn0261854.1.mrna1;Target=FBgn0261854.1 1636 1757 +
Chr2	stalkie_big_nohaplotig	exon	34628356	34628550	100	-	.	Parent=FBgn0261854.1.mrna1;Target=FBgn0261854.1 1441 1635 +
Chr2	stalkie_big_nohaplotig	exon	34628615	34629604	99	-	.	Parent=FBgn0261854.1.mrna1;Target=FBgn0261854.1 451 1440 +
Chr2	stalkie_big_nohaplotig	exon	34629674	34629759	100	-	.	Parent=FBgn0261854.1.mrna1;Target=FBgn0261854.1 365 450 +
Chr2	stalkie_big_nohaplotig	exon	34630333	34630383	100	-	.	Parent=FBgn0261854.1.mrna1;Target=FBgn0261854.1 314 364 +
Chr2	stalkie_big_nohaplotig	exon	34664066	34664186	99	-	.	Parent=FBgn0261854.1.mrna1;Target=FBgn0261854.1 193 313 +
Chr2	stalkie_big_nohaplotig	exon	34664256	34664294	100	-	.	Parent=FBgn0261854.1.mrna1;Target=FBgn0261854.1 154 192 +
Chr2	stalkie_big_nohaplotig	exon	34664792	34664915	100	-	.	Parent=FBgn0261854.1.mrna1;Target=FBgn0261854.1 1 124 +
Chr2	stalkie_big_nohaplotig	CDS	34626671	34626755	.	-	1	Parent=FBgn0261854.1.mrna1;Target=FBgn0261854.1 1758 1842 +
Chr2	stalkie_big_nohaplotig	CDS	34627920	34628041	.	-	0	Parent=FBgn0261854.1.mrna1;Target=FBgn0261854.1 1636 1757 +
Chr2	stalkie_big_nohaplotig	CDS	34628356	34628550	.	-	0	Parent=FBgn0261854.1.mrna1;Target=FBgn0261854.1 1441 1635 +
Chr2	stalkie_big_nohaplotig	CDS	34628615	34629604	.	-	0	Parent=FBgn0261854.1.mrna1;Target=FBgn0261854.1 451 1440 +
Chr2	stalkie_big_nohaplotig	CDS	34629674	34629759	.	-	2	Parent=FBgn0261854.1.mrna1;Target=FBgn0261854.1 365 450 +
Chr2	stalkie_big_nohaplotig	CDS	34630333	34630354	.	-	0	Parent=FBgn0261854.1.mrna1;Target=FBgn0261854.1 343 364 +
Chr2	gffcl	locus	34645575	34647061	.	+	.	ID=RLOC_00016238;geneIDs=ORF815.path1;transcripts=ORF815.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34645575	34647061	.	+	.	ID=ORF815.mrna1;geneID=ORF815.path1;Name=ORF815;Dir=sensecoverage=100.0;identity=99.5;matches=1406;mismatches=6;indels=1;unknowns=0;Target=ORF815 3 35 +;locus=RLOC_00016238
Chr2	stalkie_big_nohaplotig	exon	34645575	34646300	99	+	.	Parent=ORF815.mrna1;Target=ORF815 1 727 +
Chr2	stalkie_big_nohaplotig	exon	34646376	34647061	99	+	.	Parent=ORF815.mrna1;Target=ORF815 728 1413 +
Chr2	stalkie_big_nohaplotig	CDS	34645577	34645608	.	+	0	Parent=ORF815.mrna1
Chr2	gffcl	locus	34647835	34648464	.	+	.	ID=RLOC_00016239;geneIDs=comp146147_c0_seq1.path1;transcripts=comp146147_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34647835	34648464	.	+	.	ID=comp146147_c0_seq1.mrna1;geneID=comp146147_c0_seq1.path1;Name=comp146147_c0_seq1;Dir=indeterminatecoverage=96.9;identity=93.4;matches=594;mismatches=20;indels=22;unknowns=0;Target=comp146147_c0_seq1 620 1 .;CDS_Target=comp146147_c0_seq1 134 3 .;locus=RLOC_00016239
Chr2	stalkie_big_nohaplotig	exon	34647835	34648464	93	+	.	Parent=comp146147_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34647837	34647968	.	+	0	Parent=comp146147_c0_seq1.mrna1
Chr2	gffcl	locus	34682585	34689704	.	+	.	ID=RLOC_00016240;geneIDs=FBgn0033987.1.path1;transcripts=FBgn0033987.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34682585	34689704	.	+	.	ID=FBgn0033987.1.mrna1;geneID=FBgn0033987.1.path1;Name=FBgn0033987.1;Dir=sensecoverage=100.0;identity=99.9;matches=2787;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016240
Chr2	stalkie_big_nohaplotig	exon	34682585	34682858	100	+	.	Parent=FBgn0033987.1.mrna1;Target=FBgn0033987.1 1 274 +
Chr2	stalkie_big_nohaplotig	exon	34682931	34683613	100	+	.	Parent=FBgn0033987.1.mrna1;Target=FBgn0033987.1 275 957 +
Chr2	stalkie_big_nohaplotig	exon	34685925	34686158	100	+	.	Parent=FBgn0033987.1.mrna1;Target=FBgn0033987.1 958 1191 +
Chr2	stalkie_big_nohaplotig	exon	34687204	34687374	100	+	.	Parent=FBgn0033987.1.mrna1;Target=FBgn0033987.1 1192 1362 +
Chr2	stalkie_big_nohaplotig	exon	34687495	34687710	100	+	.	Parent=FBgn0033987.1.mrna1;Target=FBgn0033987.1 1363 1578 +
Chr2	stalkie_big_nohaplotig	exon	34688372	34688653	99	+	.	Parent=FBgn0033987.1.mrna1;Target=FBgn0033987.1 1579 1860 +
Chr2	stalkie_big_nohaplotig	exon	34688711	34689028	99	+	.	Parent=FBgn0033987.1.mrna1;Target=FBgn0033987.1 1861 2178 +
Chr2	stalkie_big_nohaplotig	exon	34689093	34689704	100	+	.	Parent=FBgn0033987.1.mrna1;Target=FBgn0033987.1 2179 2790 +
Chr2	stalkie_big_nohaplotig	CDS	34682585	34682858	.	+	0	Parent=FBgn0033987.1.mrna1;Target=FBgn0033987.1 1 274 +
Chr2	stalkie_big_nohaplotig	CDS	34682931	34683613	.	+	2	Parent=FBgn0033987.1.mrna1;Target=FBgn0033987.1 275 957 +
Chr2	stalkie_big_nohaplotig	CDS	34685925	34686158	.	+	0	Parent=FBgn0033987.1.mrna1;Target=FBgn0033987.1 958 1191 +
Chr2	stalkie_big_nohaplotig	CDS	34687204	34687374	.	+	0	Parent=FBgn0033987.1.mrna1;Target=FBgn0033987.1 1192 1362 +
Chr2	stalkie_big_nohaplotig	CDS	34687495	34687710	.	+	0	Parent=FBgn0033987.1.mrna1;Target=FBgn0033987.1 1363 1578 +
Chr2	stalkie_big_nohaplotig	CDS	34688372	34688653	.	+	0	Parent=FBgn0033987.1.mrna1;Target=FBgn0033987.1 1579 1860 +
Chr2	stalkie_big_nohaplotig	CDS	34688711	34689028	.	+	0	Parent=FBgn0033987.1.mrna1;Target=FBgn0033987.1 1861 2178 +
Chr2	stalkie_big_nohaplotig	CDS	34689093	34689704	.	+	0	Parent=FBgn0033987.1.mrna1;Target=FBgn0033987.1 2179 2790 +
Chr2	gffcl	locus	34696838	34710788	.	+	.	ID=RLOC_00016241;geneIDs=FBgn0033988.1.path1;transcripts=FBgn0033988.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34696838	34710788	.	+	.	ID=FBgn0033988.1.mrna1;geneID=FBgn0033988.1.path1;Name=FBgn0033988.1;Dir=sensecoverage=100.0;identity=99.6;matches=1449;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016241
Chr2	stalkie_big_nohaplotig	exon	34696838	34696885	100	+	.	Parent=FBgn0033988.1.mrna1;Target=FBgn0033988.1 1 48 +
Chr2	stalkie_big_nohaplotig	exon	34708269	34708331	100	+	.	Parent=FBgn0033988.1.mrna1;Target=FBgn0033988.1 49 111 +
Chr2	stalkie_big_nohaplotig	exon	34708395	34708572	100	+	.	Parent=FBgn0033988.1.mrna1;Target=FBgn0033988.1 112 289 +
Chr2	stalkie_big_nohaplotig	exon	34709556	34709758	98	+	.	Parent=FBgn0033988.1.mrna1;Target=FBgn0033988.1 290 492 +
Chr2	stalkie_big_nohaplotig	exon	34709826	34710788	99	+	.	Parent=FBgn0033988.1.mrna1;Target=FBgn0033988.1 493 1455 +
Chr2	stalkie_big_nohaplotig	CDS	34696838	34696885	.	+	0	Parent=FBgn0033988.1.mrna1;Target=FBgn0033988.1 1 48 +
Chr2	stalkie_big_nohaplotig	CDS	34708269	34708331	.	+	0	Parent=FBgn0033988.1.mrna1;Target=FBgn0033988.1 49 111 +
Chr2	stalkie_big_nohaplotig	CDS	34708395	34708572	.	+	0	Parent=FBgn0033988.1.mrna1;Target=FBgn0033988.1 112 289 +
Chr2	stalkie_big_nohaplotig	CDS	34709556	34709758	.	+	2	Parent=FBgn0033988.1.mrna1;Target=FBgn0033988.1 290 492 +
Chr2	stalkie_big_nohaplotig	CDS	34709826	34710788	.	+	0	Parent=FBgn0033988.1.mrna1;Target=FBgn0033988.1 493 1455 +
Chr2	gffcl	locus	34706132	34713901	.	-	.	ID=RLOC_00016242;geneIDs=FBgn0033989.1.path1;transcripts=FBgn0033989.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34706132	34713901	.	-	.	ID=FBgn0033989.1.mrna1;geneID=FBgn0033989.1.path1;Name=FBgn0033989.1;Dir=sensecoverage=100.0;identity=100.0;matches=1347;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016242
Chr2	stalkie_big_nohaplotig	exon	34706132	34706283	100	-	.	Parent=FBgn0033989.1.mrna1;Target=FBgn0033989.1 1196 1347 +
Chr2	stalkie_big_nohaplotig	exon	34706348	34706474	100	-	.	Parent=FBgn0033989.1.mrna1;Target=FBgn0033989.1 1069 1195 +
Chr2	stalkie_big_nohaplotig	exon	34706536	34706967	100	-	.	Parent=FBgn0033989.1.mrna1;Target=FBgn0033989.1 637 1068 +
Chr2	stalkie_big_nohaplotig	exon	34707051	34707162	100	-	.	Parent=FBgn0033989.1.mrna1;Target=FBgn0033989.1 525 636 +
Chr2	stalkie_big_nohaplotig	exon	34707318	34707638	100	-	.	Parent=FBgn0033989.1.mrna1;Target=FBgn0033989.1 204 524 +
Chr2	stalkie_big_nohaplotig	exon	34707713	34707834	100	-	.	Parent=FBgn0033989.1.mrna1;Target=FBgn0033989.1 82 203 +
Chr2	stalkie_big_nohaplotig	exon	34707920	34707986	100	-	.	Parent=FBgn0033989.1.mrna1;Target=FBgn0033989.1 15 81 +
Chr2	stalkie_big_nohaplotig	exon	34713888	34713901	100	-	.	Parent=FBgn0033989.1.mrna1;Target=FBgn0033989.1 1 14 +
Chr2	stalkie_big_nohaplotig	CDS	34706132	34706283	.	-	2	Parent=FBgn0033989.1.mrna1;Target=FBgn0033989.1 1196 1347 +
Chr2	stalkie_big_nohaplotig	CDS	34706348	34706474	.	-	0	Parent=FBgn0033989.1.mrna1;Target=FBgn0033989.1 1069 1195 +
Chr2	stalkie_big_nohaplotig	CDS	34706536	34706967	.	-	0	Parent=FBgn0033989.1.mrna1;Target=FBgn0033989.1 637 1068 +
Chr2	stalkie_big_nohaplotig	CDS	34707051	34707162	.	-	1	Parent=FBgn0033989.1.mrna1;Target=FBgn0033989.1 525 636 +
Chr2	stalkie_big_nohaplotig	CDS	34707318	34707638	.	-	1	Parent=FBgn0033989.1.mrna1;Target=FBgn0033989.1 204 524 +
Chr2	stalkie_big_nohaplotig	CDS	34707713	34707834	.	-	0	Parent=FBgn0033989.1.mrna1;Target=FBgn0033989.1 82 203 +
Chr2	stalkie_big_nohaplotig	CDS	34707920	34707986	.	-	1	Parent=FBgn0033989.1.mrna1;Target=FBgn0033989.1 15 81 +
Chr2	stalkie_big_nohaplotig	CDS	34713888	34713901	.	-	0	Parent=FBgn0033989.1.mrna1;Target=FBgn0033989.1 1 14 +
Chr2	gffcl	locus	34716184	34717060	.	-	.	ID=RLOC_00016243;geneIDs=FBgn0034517.1.path1;transcripts=FBgn0034517.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34716184	34717060	.	-	.	ID=FBgn0034517.1.mrna1;geneID=FBgn0034517.1.path1;Name=FBgn0034517.1;Dir=sensecoverage=100.0;identity=99.3;matches=584;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016243
Chr2	stalkie_big_nohaplotig	exon	34716184	34716363	99	-	.	Parent=FBgn0034517.1.mrna1;Target=FBgn0034517.1 409 588 +
Chr2	stalkie_big_nohaplotig	exon	34716560	34716931	99	-	.	Parent=FBgn0034517.1.mrna1;Target=FBgn0034517.1 37 408 +
Chr2	stalkie_big_nohaplotig	exon	34717025	34717060	100	-	.	Parent=FBgn0034517.1.mrna1;Target=FBgn0034517.1 1 36 +
Chr2	stalkie_big_nohaplotig	CDS	34716184	34716363	.	-	0	Parent=FBgn0034517.1.mrna1;Target=FBgn0034517.1 409 588 +
Chr2	stalkie_big_nohaplotig	CDS	34716560	34716931	.	-	0	Parent=FBgn0034517.1.mrna1;Target=FBgn0034517.1 37 408 +
Chr2	stalkie_big_nohaplotig	CDS	34717025	34717060	.	-	0	Parent=FBgn0034517.1.mrna1;Target=FBgn0034517.1 1 36 +
Chr2	gffcl	locus	34722139	34722615	.	-	.	ID=RLOC_00016244;geneIDs=FBgn0034519.1.path1;transcripts=FBgn0034519.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34722139	34722615	.	-	.	ID=FBgn0034519.1.mrna1;geneID=FBgn0034519.1.path1;Name=FBgn0034519.1;Dir=sensecoverage=100.0;identity=100.0;matches=345;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016244
Chr2	stalkie_big_nohaplotig	exon	34722139	34722315	100	-	.	Parent=FBgn0034519.1.mrna1;Target=FBgn0034519.1 169 345 +
Chr2	stalkie_big_nohaplotig	exon	34722380	34722520	100	-	.	Parent=FBgn0034519.1.mrna1;Target=FBgn0034519.1 28 168 +
Chr2	stalkie_big_nohaplotig	exon	34722589	34722615	100	-	.	Parent=FBgn0034519.1.mrna1;Target=FBgn0034519.1 1 27 +
Chr2	stalkie_big_nohaplotig	CDS	34722139	34722315	.	-	0	Parent=FBgn0034519.1.mrna1;Target=FBgn0034519.1 169 345 +
Chr2	stalkie_big_nohaplotig	CDS	34722380	34722520	.	-	0	Parent=FBgn0034519.1.mrna1;Target=FBgn0034519.1 28 168 +
Chr2	stalkie_big_nohaplotig	CDS	34722589	34722615	.	-	0	Parent=FBgn0034519.1.mrna1;Target=FBgn0034519.1 1 27 +
Chr2	gffcl	locus	34727667	34730853	.	-	.	ID=RLOC_00016245;geneIDs=FBgn0034093.1.path1;transcripts=FBgn0034093.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34727667	34730853	.	-	.	ID=FBgn0034093.1.mrna1;geneID=FBgn0034093.1.path1;Name=FBgn0034093.1;Dir=sensecoverage=100.0;identity=99.6;matches=1617;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016245
Chr2	stalkie_big_nohaplotig	exon	34727667	34728911	99	-	.	Parent=FBgn0034093.1.mrna1;Target=FBgn0034093.1 379 1623 +
Chr2	stalkie_big_nohaplotig	exon	34730191	34730343	97	-	.	Parent=FBgn0034093.1.mrna1;Target=FBgn0034093.1 226 378 +
Chr2	stalkie_big_nohaplotig	exon	34730576	34730721	100	-	.	Parent=FBgn0034093.1.mrna1;Target=FBgn0034093.1 80 225 +
Chr2	stalkie_big_nohaplotig	exon	34730775	34730853	100	-	.	Parent=FBgn0034093.1.mrna1;Target=FBgn0034093.1 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	34727667	34728911	.	-	0	Parent=FBgn0034093.1.mrna1;Target=FBgn0034093.1 379 1623 +
Chr2	stalkie_big_nohaplotig	CDS	34730191	34730343	.	-	0	Parent=FBgn0034093.1.mrna1;Target=FBgn0034093.1 226 378 +
Chr2	stalkie_big_nohaplotig	CDS	34730576	34730721	.	-	2	Parent=FBgn0034093.1.mrna1;Target=FBgn0034093.1 80 225 +
Chr2	stalkie_big_nohaplotig	CDS	34730775	34730853	.	-	0	Parent=FBgn0034093.1.mrna1;Target=FBgn0034093.1 1 79 +
Chr2	gffcl	locus	34740526	34749364	.	+	.	ID=RLOC_00016246;geneIDs=FBgn0034094.1.path1;transcripts=FBgn0034094.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34740526	34749364	.	+	.	ID=FBgn0034094.1.mrna1;geneID=FBgn0034094.1.path1;Name=FBgn0034094.1;Dir=sensecoverage=100.0;identity=99.7;matches=2153;mismatches=7;indels=0;unknowns=0;locus=RLOC_00016246
Chr2	stalkie_big_nohaplotig	exon	34740526	34740628	100	+	.	Parent=FBgn0034094.1.mrna1;Target=FBgn0034094.1 1 103 +
Chr2	stalkie_big_nohaplotig	exon	34747177	34747544	99	+	.	Parent=FBgn0034094.1.mrna1;Target=FBgn0034094.1 104 471 +
Chr2	stalkie_big_nohaplotig	exon	34747613	34747915	99	+	.	Parent=FBgn0034094.1.mrna1;Target=FBgn0034094.1 472 774 +
Chr2	stalkie_big_nohaplotig	exon	34747979	34749364	99	+	.	Parent=FBgn0034094.1.mrna1;Target=FBgn0034094.1 775 2160 +
Chr2	stalkie_big_nohaplotig	CDS	34740526	34740628	.	+	0	Parent=FBgn0034094.1.mrna1;Target=FBgn0034094.1 1 103 +
Chr2	stalkie_big_nohaplotig	CDS	34747177	34747544	.	+	2	Parent=FBgn0034094.1.mrna1;Target=FBgn0034094.1 104 471 +
Chr2	stalkie_big_nohaplotig	CDS	34747613	34747915	.	+	0	Parent=FBgn0034094.1.mrna1;Target=FBgn0034094.1 472 774 +
Chr2	stalkie_big_nohaplotig	CDS	34747979	34749364	.	+	0	Parent=FBgn0034094.1.mrna1;Target=FBgn0034094.1 775 2160 +
Chr2	gffcl	locus	34751757	34755618	.	+	.	ID=RLOC_00016247;geneIDs=FBgn0034095.1.path1;transcripts=FBgn0034095.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34751757	34755618	.	+	.	ID=FBgn0034095.1.mrna1;geneID=FBgn0034095.1.path1;Name=FBgn0034095.1;Dir=sensecoverage=99.5;identity=98.8;matches=2387;mismatches=13;indels=15;unknowns=0;locus=RLOC_00016247
Chr2	stalkie_big_nohaplotig	exon	34751757	34751807	100	+	.	Parent=FBgn0034095.1.mrna1;Target=FBgn0034095.1 1 51 +
Chr2	stalkie_big_nohaplotig	exon	34752009	34754279	98	+	.	Parent=FBgn0034095.1.mrna1;Target=FBgn0034095.1 52 2307 +
Chr2	stalkie_big_nohaplotig	exon	34755526	34755618	100	+	.	Parent=FBgn0034095.1.mrna1;Target=FBgn0034095.1 2308 2400 +
Chr2	stalkie_big_nohaplotig	CDS	34751757	34751807	.	+	0	Parent=FBgn0034095.1.mrna1;Target=FBgn0034095.1 1 51 +
Chr2	stalkie_big_nohaplotig	CDS	34752009	34754279	.	+	0	Parent=FBgn0034095.1.mrna1;Target=FBgn0034095.1 52 2307 +
Chr2	stalkie_big_nohaplotig	CDS	34755526	34755618	.	+	0	Parent=FBgn0034095.1.mrna1;Target=FBgn0034095.1 2308 2400 +
Chr2	gffcl	locus	34765200	34765672	.	+	.	ID=RLOC_00016248;geneIDs=FBgn0034097.1.path1;transcripts=FBgn0034097.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34765200	34765672	.	+	.	ID=FBgn0034097.1.mrna1;geneID=FBgn0034097.1.path1;Name=FBgn0034097.1;Dir=sensecoverage=100.0;identity=100.0;matches=408;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016248
Chr2	stalkie_big_nohaplotig	exon	34765200	34765375	100	+	.	Parent=FBgn0034097.1.mrna1;Target=FBgn0034097.1 1 176 +
Chr2	stalkie_big_nohaplotig	exon	34765441	34765672	100	+	.	Parent=FBgn0034097.1.mrna1;Target=FBgn0034097.1 177 408 +
Chr2	stalkie_big_nohaplotig	CDS	34765200	34765375	.	+	0	Parent=FBgn0034097.1.mrna1;Target=FBgn0034097.1 1 176 +
Chr2	stalkie_big_nohaplotig	CDS	34765441	34765672	.	+	1	Parent=FBgn0034097.1.mrna1;Target=FBgn0034097.1 177 408 +
Chr2	gffcl	locus	34778181	34780193	.	+	.	ID=RLOC_00016249;geneIDs=FBgn0034098.1.path1;transcripts=FBgn0034098.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34778181	34780193	.	+	.	ID=FBgn0034098.1.mrna1;geneID=FBgn0034098.1.path1;Name=FBgn0034098.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2013;mismatches=0;indels=0;unknowns=0;Target=FBgn0034098.1 2013 1 .;locus=RLOC_00016249
Chr2	stalkie_big_nohaplotig	exon	34778181	34780193	100	+	.	Parent=FBgn0034098.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34778181	34780193	.	+	0	Parent=FBgn0034098.1.mrna1
Chr2	gffcl	locus	34780473	34780753	.	+	.	ID=RLOC_00016250;geneIDs=comp119212_c0_seq1.path1;transcripts=comp119212_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34780473	34780753	.	+	.	ID=comp119212_c0_seq1.mrna1;geneID=comp119212_c0_seq1.path1;Name=comp119212_c0_seq1;Dir=indeterminatecoverage=88.9;identity=100.0;matches=281;mismatches=0;indels=0;unknowns=0;Target=comp119212_c0_seq1 281 1 .;CDS_Target=comp119212_c0_seq1 115 41 .;locus=RLOC_00016250
Chr2	stalkie_big_nohaplotig	exon	34780473	34780753	100	+	.	Parent=comp119212_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34780513	34780587	.	+	0	Parent=comp119212_c0_seq1.mrna1
Chr2	gffcl	locus	34782064	34783536	.	-	.	ID=RLOC_00016251;geneIDs=FBgn0034304.1.path1;transcripts=FBgn0034304.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34782064	34783536	.	-	.	ID=FBgn0034304.1.mrna1;geneID=FBgn0034304.1.path1;Name=FBgn0034304.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1473;mismatches=0;indels=0;unknowns=0;Target=FBgn0034304.1 1473 1 .;locus=RLOC_00016251
Chr2	stalkie_big_nohaplotig	exon	34782064	34783536	100	-	.	Parent=FBgn0034304.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34782064	34783536	.	-	0	Parent=FBgn0034304.1.mrna1
Chr2	gffcl	locus	34784756	34788264	.	+	.	ID=RLOC_00016252;geneIDs=FBgn0000057.1.path2;transcripts=FBgn0000057.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	34784756	34788264	.	+	.	ID=FBgn0000057.1.mrna2;geneID=FBgn0000057.1.path2;Name=FBgn0000057.1;Dir=sensecoverage=100.0;identity=99.8;matches=1925;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016252
Chr2	stalkie_big_nohaplotig	exon	34784756	34784795	100	+	.	Parent=FBgn0000057.1.mrna2;Target=FBgn0000057.1 1 40 +
Chr2	stalkie_big_nohaplotig	exon	34784847	34785569	99	+	.	Parent=FBgn0000057.1.mrna2;Target=FBgn0000057.1 41 763 +
Chr2	stalkie_big_nohaplotig	exon	34787099	34788264	99	+	.	Parent=FBgn0000057.1.mrna2;Target=FBgn0000057.1 764 1929 +
Chr2	stalkie_big_nohaplotig	CDS	34784756	34784795	.	+	0	Parent=FBgn0000057.1.mrna2;Target=FBgn0000057.1 1 40 +
Chr2	stalkie_big_nohaplotig	CDS	34784847	34785569	.	+	2	Parent=FBgn0000057.1.mrna2;Target=FBgn0000057.1 41 763 +
Chr2	stalkie_big_nohaplotig	CDS	34787099	34788264	.	+	2	Parent=FBgn0000057.1.mrna2;Target=FBgn0000057.1 764 1929 +
Chr2	gffcl	locus	34794568	34794929	.	-	.	ID=RLOC_00016253;geneIDs=comp147441_c0_seq1.path1;transcripts=comp147441_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34794568	34794929	.	-	.	ID=comp147441_c0_seq1.mrna1;geneID=comp147441_c0_seq1.path1;Name=comp147441_c0_seq1;Dir=indeterminatecoverage=55.8;identity=97.7;matches=257;mismatches=5;indels=1;unknowns=100;Target=comp147441_c0_seq1 380 18 .;CDS_Target=comp147441_c0_seq1 252 232 .;locus=RLOC_00016253
Chr2	stalkie_big_nohaplotig	exon	34794568	34794929	97	-	.	Parent=comp147441_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34794696	34794715	.	-	0	Parent=comp147441_c0_seq1.mrna1
Chr2	gffcl	locus	34797552	34804618	.	-	.	ID=RLOC_00016254;geneIDs=FBgn0261619.1.path1;transcripts=FBgn0261619.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34797552	34804618	.	-	.	ID=FBgn0261619.1.mrna1;geneID=FBgn0261619.1.path1;Name=FBgn0261619.1;Dir=sensecoverage=100.0;identity=99.9;matches=1928;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016254
Chr2	stalkie_big_nohaplotig	exon	34797552	34797802	100	-	.	Parent=FBgn0261619.1.mrna1;Target=FBgn0261619.1 1679 1929 +
Chr2	stalkie_big_nohaplotig	exon	34797891	34798902	100	-	.	Parent=FBgn0261619.1.mrna1;Target=FBgn0261619.1 667 1678 +
Chr2	stalkie_big_nohaplotig	exon	34799347	34799819	99	-	.	Parent=FBgn0261619.1.mrna1;Target=FBgn0261619.1 194 666 +
Chr2	stalkie_big_nohaplotig	exon	34804426	34804618	100	-	.	Parent=FBgn0261619.1.mrna1;Target=FBgn0261619.1 1 193 +
Chr2	stalkie_big_nohaplotig	CDS	34797552	34797802	.	-	2	Parent=FBgn0261619.1.mrna1;Target=FBgn0261619.1 1679 1929 +
Chr2	stalkie_big_nohaplotig	CDS	34797891	34798902	.	-	0	Parent=FBgn0261619.1.mrna1;Target=FBgn0261619.1 667 1678 +
Chr2	stalkie_big_nohaplotig	CDS	34799347	34799819	.	-	2	Parent=FBgn0261619.1.mrna1;Target=FBgn0261619.1 194 666 +
Chr2	stalkie_big_nohaplotig	CDS	34804426	34804618	.	-	0	Parent=FBgn0261619.1.mrna1;Target=FBgn0261619.1 1 193 +
Chr2	gffcl	locus	34801385	34801840	.	+	.	ID=RLOC_00016255;geneIDs=comp147839_c1_seq1.path1;transcripts=comp147839_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34801385	34801840	.	+	.	ID=comp147839_c1_seq1.mrna1;geneID=comp147839_c1_seq1.path1;Name=comp147839_c1_seq1;Dir=indeterminatecoverage=99.7;identity=96.9;matches=378;mismatches=0;indels=12;unknowns=0;Target=comp147839_c1_seq1 53 3 .;locus=RLOC_00016255
Chr2	stalkie_big_nohaplotig	exon	34801385	34801684	100	+	.	Parent=comp147839_c1_seq1.mrna1;Target=comp147839_c1_seq1 300 1 .
Chr2	stalkie_big_nohaplotig	exon	34801763	34801840	86	+	.	Parent=comp147839_c1_seq1.mrna1;Target=comp147839_c1_seq1 390 301 .
Chr2	stalkie_big_nohaplotig	CDS	34801387	34801437	.	+	0	Parent=comp147839_c1_seq1.mrna1
Chr2	gffcl	locus	34813588	34818164	.	-	.	ID=RLOC_00016256;geneIDs=FBgn0033705.1.path1;transcripts=FBgn0033705.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34813588	34818164	.	-	.	ID=FBgn0033705.1.mrna1;geneID=FBgn0033705.1.path1;Name=FBgn0033705.1;Dir=sensecoverage=100.0;identity=100.0;matches=1305;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016256
Chr2	stalkie_big_nohaplotig	exon	34813588	34813981	100	-	.	Parent=FBgn0033705.1.mrna1;Target=FBgn0033705.1 912 1305 +
Chr2	stalkie_big_nohaplotig	exon	34814817	34814966	100	-	.	Parent=FBgn0033705.1.mrna1;Target=FBgn0033705.1 762 911 +
Chr2	stalkie_big_nohaplotig	exon	34816981	34817116	100	-	.	Parent=FBgn0033705.1.mrna1;Target=FBgn0033705.1 626 761 +
Chr2	stalkie_big_nohaplotig	exon	34817170	34817434	100	-	.	Parent=FBgn0033705.1.mrna1;Target=FBgn0033705.1 361 625 +
Chr2	stalkie_big_nohaplotig	exon	34817488	34817693	100	-	.	Parent=FBgn0033705.1.mrna1;Target=FBgn0033705.1 155 360 +
Chr2	stalkie_big_nohaplotig	exon	34817749	34817842	100	-	.	Parent=FBgn0033705.1.mrna1;Target=FBgn0033705.1 61 154 +
Chr2	stalkie_big_nohaplotig	exon	34818105	34818164	100	-	.	Parent=FBgn0033705.1.mrna1;Target=FBgn0033705.1 1 60 +
Chr2	stalkie_big_nohaplotig	CDS	34813588	34813981	.	-	1	Parent=FBgn0033705.1.mrna1;Target=FBgn0033705.1 912 1305 +
Chr2	stalkie_big_nohaplotig	CDS	34814817	34814966	.	-	1	Parent=FBgn0033705.1.mrna1;Target=FBgn0033705.1 762 911 +
Chr2	stalkie_big_nohaplotig	CDS	34816981	34817116	.	-	2	Parent=FBgn0033705.1.mrna1;Target=FBgn0033705.1 626 761 +
Chr2	stalkie_big_nohaplotig	CDS	34817170	34817434	.	-	0	Parent=FBgn0033705.1.mrna1;Target=FBgn0033705.1 361 625 +
Chr2	stalkie_big_nohaplotig	CDS	34817488	34817693	.	-	2	Parent=FBgn0033705.1.mrna1;Target=FBgn0033705.1 155 360 +
Chr2	stalkie_big_nohaplotig	CDS	34817749	34817842	.	-	0	Parent=FBgn0033705.1.mrna1;Target=FBgn0033705.1 61 154 +
Chr2	stalkie_big_nohaplotig	CDS	34818105	34818164	.	-	0	Parent=FBgn0033705.1.mrna1;Target=FBgn0033705.1 1 60 +
Chr2	gffcl	locus	34815534	34816213	.	+	.	ID=RLOC_00016257;geneIDs=comp150293_c1_seq1.path1;transcripts=comp150293_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34815534	34816213	.	+	.	ID=comp150293_c1_seq1.mrna1;geneID=comp150293_c1_seq1.path1;Name=comp150293_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=679;mismatches=1;indels=0;unknowns=0;Target=comp150293_c1_seq1 680 1 .;CDS_Target=comp150293_c1_seq1 340 125 .;locus=RLOC_00016257
Chr2	stalkie_big_nohaplotig	exon	34815534	34816213	99	+	.	Parent=comp150293_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34815658	34815873	.	+	0	Parent=comp150293_c1_seq1.mrna1
Chr2	gffcl	locus	34816372	34816772	.	-	.	ID=RLOC_00016258;geneIDs=comp141391_c0_seq1.path1;transcripts=comp141391_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34816372	34816772	.	-	.	ID=comp141391_c0_seq1.mrna1;geneID=comp141391_c0_seq1.path1;Name=comp141391_c0_seq1;Dir=indeterminatecoverage=94.4;identity=100.0;matches=401;mismatches=0;indels=0;unknowns=0;Target=comp141391_c0_seq1 425 25 .;CDS_Target=comp141391_c0_seq1 99 25 .;locus=RLOC_00016258
Chr2	stalkie_big_nohaplotig	exon	34816372	34816772	100	-	.	Parent=comp141391_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34816698	34816772	.	-	0	Parent=comp141391_c0_seq1.mrna1
Chr2	gffcl	locus	34822635	34826162	.	-	.	ID=RLOC_00016259;geneIDs=FBgn0003044.1.path1;transcripts=FBgn0003044.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34822635	34826162	.	-	.	ID=FBgn0003044.1.mrna1;geneID=FBgn0003044.1.path1;Name=FBgn0003044.1;Dir=sensecoverage=99.8;identity=100.0;matches=2554;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016259
Chr2	stalkie_big_nohaplotig	exon	34822635	34823054	100	-	.	Parent=FBgn0003044.1.mrna1;Target=FBgn0003044.1 2136 2555 +
Chr2	stalkie_big_nohaplotig	exon	34823689	34823921	100	-	.	Parent=FBgn0003044.1.mrna1;Target=FBgn0003044.1 1903 2135 +
Chr2	stalkie_big_nohaplotig	exon	34823992	34824190	100	-	.	Parent=FBgn0003044.1.mrna1;Target=FBgn0003044.1 1704 1902 +
Chr2	stalkie_big_nohaplotig	exon	34824244	34824416	100	-	.	Parent=FBgn0003044.1.mrna1;Target=FBgn0003044.1 1531 1703 +
Chr2	stalkie_big_nohaplotig	exon	34824577	34824625	100	-	.	Parent=FBgn0003044.1.mrna1;Target=FBgn0003044.1 1482 1530 +
Chr2	stalkie_big_nohaplotig	exon	34824682	34826162	99	-	.	Parent=FBgn0003044.1.mrna1;Target=FBgn0003044.1 1 1481 +
Chr2	stalkie_big_nohaplotig	CDS	34822637	34823054	.	-	1	Parent=FBgn0003044.1.mrna1;Target=FBgn0003044.1 2136 2553 +
Chr2	stalkie_big_nohaplotig	CDS	34823689	34823921	.	-	0	Parent=FBgn0003044.1.mrna1;Target=FBgn0003044.1 1903 2135 +
Chr2	stalkie_big_nohaplotig	CDS	34823992	34824190	.	-	1	Parent=FBgn0003044.1.mrna1;Target=FBgn0003044.1 1704 1902 +
Chr2	stalkie_big_nohaplotig	CDS	34824244	34824416	.	-	0	Parent=FBgn0003044.1.mrna1;Target=FBgn0003044.1 1531 1703 +
Chr2	stalkie_big_nohaplotig	CDS	34824577	34824625	.	-	1	Parent=FBgn0003044.1.mrna1;Target=FBgn0003044.1 1482 1530 +
Chr2	stalkie_big_nohaplotig	CDS	34824682	34826162	.	-	0	Parent=FBgn0003044.1.mrna1;Target=FBgn0003044.1 1 1481 +
Chr2	gffcl	locus	34828126	34832314	.	+	.	ID=RLOC_00016260;geneIDs=FBgn0001222.1.path1;transcripts=FBgn0001222.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34828126	34832314	.	+	.	ID=FBgn0001222.1.mrna1;geneID=FBgn0001222.1.path1;Name=FBgn0001222.1;Dir=sensecoverage=100.0;identity=100.0;matches=2030;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016260
Chr2	stalkie_big_nohaplotig	exon	34828126	34828159	100	+	.	Parent=FBgn0001222.1.mrna1;Target=FBgn0001222.1 1 34 +
Chr2	stalkie_big_nohaplotig	exon	34828530	34828654	100	+	.	Parent=FBgn0001222.1.mrna1;Target=FBgn0001222.1 35 159 +
Chr2	stalkie_big_nohaplotig	exon	34829033	34829141	100	+	.	Parent=FBgn0001222.1.mrna1;Target=FBgn0001222.1 160 268 +
Chr2	stalkie_big_nohaplotig	exon	34829194	34829522	100	+	.	Parent=FBgn0001222.1.mrna1;Target=FBgn0001222.1 269 597 +
Chr2	stalkie_big_nohaplotig	exon	34829587	34830456	99	+	.	Parent=FBgn0001222.1.mrna1;Target=FBgn0001222.1 598 1467 +
Chr2	stalkie_big_nohaplotig	exon	34830555	34830784	100	+	.	Parent=FBgn0001222.1.mrna1;Target=FBgn0001222.1 1468 1697 +
Chr2	stalkie_big_nohaplotig	exon	34830850	34830955	100	+	.	Parent=FBgn0001222.1.mrna1;Target=FBgn0001222.1 1698 1803 +
Chr2	stalkie_big_nohaplotig	exon	34831921	34831993	100	+	.	Parent=FBgn0001222.1.mrna1;Target=FBgn0001222.1 1804 1876 +
Chr2	stalkie_big_nohaplotig	exon	34832050	34832127	100	+	.	Parent=FBgn0001222.1.mrna1;Target=FBgn0001222.1 1877 1954 +
Chr2	stalkie_big_nohaplotig	exon	34832238	34832314	100	+	.	Parent=FBgn0001222.1.mrna1;Target=FBgn0001222.1 1955 2031 +
Chr2	stalkie_big_nohaplotig	CDS	34828126	34828159	.	+	0	Parent=FBgn0001222.1.mrna1;Target=FBgn0001222.1 1 34 +
Chr2	stalkie_big_nohaplotig	CDS	34828530	34828654	.	+	2	Parent=FBgn0001222.1.mrna1;Target=FBgn0001222.1 35 159 +
Chr2	stalkie_big_nohaplotig	CDS	34829033	34829141	.	+	0	Parent=FBgn0001222.1.mrna1;Target=FBgn0001222.1 160 268 +
Chr2	stalkie_big_nohaplotig	CDS	34829194	34829522	.	+	2	Parent=FBgn0001222.1.mrna1;Target=FBgn0001222.1 269 597 +
Chr2	stalkie_big_nohaplotig	CDS	34829587	34830456	.	+	0	Parent=FBgn0001222.1.mrna1;Target=FBgn0001222.1 598 1467 +
Chr2	stalkie_big_nohaplotig	CDS	34830555	34830784	.	+	0	Parent=FBgn0001222.1.mrna1;Target=FBgn0001222.1 1468 1697 +
Chr2	stalkie_big_nohaplotig	CDS	34830850	34830955	.	+	1	Parent=FBgn0001222.1.mrna1;Target=FBgn0001222.1 1698 1803 +
Chr2	stalkie_big_nohaplotig	CDS	34831921	34831993	.	+	0	Parent=FBgn0001222.1.mrna1;Target=FBgn0001222.1 1804 1876 +
Chr2	stalkie_big_nohaplotig	CDS	34832050	34832127	.	+	2	Parent=FBgn0001222.1.mrna1;Target=FBgn0001222.1 1877 1954 +
Chr2	stalkie_big_nohaplotig	CDS	34832238	34832314	.	+	2	Parent=FBgn0001222.1.mrna1;Target=FBgn0001222.1 1955 2031 +
Chr2	gffcl	locus	34833860	34834997	.	-	.	ID=RLOC_00016261;geneIDs=FBgn0040465.1.path1;transcripts=FBgn0040465.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34833860	34834997	.	-	.	ID=FBgn0040465.1.mrna1;geneID=FBgn0040465.1.path1;Name=FBgn0040465.1;Dir=sensecoverage=100.0;identity=100.0;matches=933;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016261
Chr2	stalkie_big_nohaplotig	exon	34833860	34834451	100	-	.	Parent=FBgn0040465.1.mrna1;Target=FBgn0040465.1 342 933 +
Chr2	stalkie_big_nohaplotig	exon	34834534	34834693	100	-	.	Parent=FBgn0040465.1.mrna1;Target=FBgn0040465.1 182 341 +
Chr2	stalkie_big_nohaplotig	exon	34834752	34834877	100	-	.	Parent=FBgn0040465.1.mrna1;Target=FBgn0040465.1 56 181 +
Chr2	stalkie_big_nohaplotig	exon	34834943	34834997	100	-	.	Parent=FBgn0040465.1.mrna1;Target=FBgn0040465.1 1 55 +
Chr2	stalkie_big_nohaplotig	CDS	34833860	34834451	.	-	1	Parent=FBgn0040465.1.mrna1;Target=FBgn0040465.1 342 933 +
Chr2	stalkie_big_nohaplotig	CDS	34834534	34834693	.	-	2	Parent=FBgn0040465.1.mrna1;Target=FBgn0040465.1 182 341 +
Chr2	stalkie_big_nohaplotig	CDS	34834752	34834877	.	-	2	Parent=FBgn0040465.1.mrna1;Target=FBgn0040465.1 56 181 +
Chr2	stalkie_big_nohaplotig	CDS	34834943	34834997	.	-	0	Parent=FBgn0040465.1.mrna1;Target=FBgn0040465.1 1 55 +
Chr2	gffcl	locus	34838704	34841117	.	+	.	ID=RLOC_00016262;geneIDs=FBgn0033673.1.path1;transcripts=FBgn0033673.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34838704	34841117	.	+	.	ID=FBgn0033673.1.mrna1;geneID=FBgn0033673.1.path1;Name=FBgn0033673.1;Dir=sensecoverage=100.0;identity=100.0;matches=1797;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016262
Chr2	stalkie_big_nohaplotig	exon	34838704	34838799	100	+	.	Parent=FBgn0033673.1.mrna1;Target=FBgn0033673.1 1 96 +
Chr2	stalkie_big_nohaplotig	exon	34838861	34838989	100	+	.	Parent=FBgn0033673.1.mrna1;Target=FBgn0033673.1 97 225 +
Chr2	stalkie_big_nohaplotig	exon	34839078	34839207	100	+	.	Parent=FBgn0033673.1.mrna1;Target=FBgn0033673.1 226 355 +
Chr2	stalkie_big_nohaplotig	exon	34839269	34839483	100	+	.	Parent=FBgn0033673.1.mrna1;Target=FBgn0033673.1 356 570 +
Chr2	stalkie_big_nohaplotig	exon	34839603	34839815	100	+	.	Parent=FBgn0033673.1.mrna1;Target=FBgn0033673.1 571 783 +
Chr2	stalkie_big_nohaplotig	exon	34839871	34840316	100	+	.	Parent=FBgn0033673.1.mrna1;Target=FBgn0033673.1 784 1229 +
Chr2	stalkie_big_nohaplotig	exon	34840376	34840737	100	+	.	Parent=FBgn0033673.1.mrna1;Target=FBgn0033673.1 1230 1591 +
Chr2	stalkie_big_nohaplotig	exon	34840912	34841117	100	+	.	Parent=FBgn0033673.1.mrna1;Target=FBgn0033673.1 1592 1797 +
Chr2	stalkie_big_nohaplotig	CDS	34838704	34838799	.	+	0	Parent=FBgn0033673.1.mrna1;Target=FBgn0033673.1 1 96 +
Chr2	stalkie_big_nohaplotig	CDS	34838861	34838989	.	+	0	Parent=FBgn0033673.1.mrna1;Target=FBgn0033673.1 97 225 +
Chr2	stalkie_big_nohaplotig	CDS	34839078	34839207	.	+	0	Parent=FBgn0033673.1.mrna1;Target=FBgn0033673.1 226 355 +
Chr2	stalkie_big_nohaplotig	CDS	34839269	34839483	.	+	2	Parent=FBgn0033673.1.mrna1;Target=FBgn0033673.1 356 570 +
Chr2	stalkie_big_nohaplotig	CDS	34839603	34839815	.	+	0	Parent=FBgn0033673.1.mrna1;Target=FBgn0033673.1 571 783 +
Chr2	stalkie_big_nohaplotig	CDS	34839871	34840316	.	+	0	Parent=FBgn0033673.1.mrna1;Target=FBgn0033673.1 784 1229 +
Chr2	stalkie_big_nohaplotig	CDS	34840376	34840737	.	+	1	Parent=FBgn0033673.1.mrna1;Target=FBgn0033673.1 1230 1591 +
Chr2	stalkie_big_nohaplotig	CDS	34840912	34841117	.	+	2	Parent=FBgn0033673.1.mrna1;Target=FBgn0033673.1 1592 1797 +
Chr2	gffcl	locus	34846786	34851960	.	+	.	ID=RLOC_00016263;geneIDs=FBgn0039420.1.path1;transcripts=FBgn0039420.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34846786	34851960	.	+	.	ID=FBgn0039420.1.mrna1;geneID=FBgn0039420.1.path1;Name=FBgn0039420.1;Dir=sensecoverage=100.0;identity=99.8;matches=1207;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016263
Chr2	stalkie_big_nohaplotig	exon	34846786	34846898	99	+	.	Parent=FBgn0039420.1.mrna1;Target=FBgn0039420.1 1 113 +
Chr2	stalkie_big_nohaplotig	exon	34848532	34848688	100	+	.	Parent=FBgn0039420.1.mrna1;Target=FBgn0039420.1 114 270 +
Chr2	stalkie_big_nohaplotig	exon	34848800	34848932	99	+	.	Parent=FBgn0039420.1.mrna1;Target=FBgn0039420.1 271 403 +
Chr2	stalkie_big_nohaplotig	exon	34849002	34849152	100	+	.	Parent=FBgn0039420.1.mrna1;Target=FBgn0039420.1 404 554 +
Chr2	stalkie_big_nohaplotig	exon	34849860	34849929	100	+	.	Parent=FBgn0039420.1.mrna1;Target=FBgn0039420.1 555 624 +
Chr2	stalkie_big_nohaplotig	exon	34849988	34850164	100	+	.	Parent=FBgn0039420.1.mrna1;Target=FBgn0039420.1 625 801 +
Chr2	stalkie_big_nohaplotig	exon	34850225	34850309	100	+	.	Parent=FBgn0039420.1.mrna1;Target=FBgn0039420.1 802 886 +
Chr2	stalkie_big_nohaplotig	exon	34850773	34850848	100	+	.	Parent=FBgn0039420.1.mrna1;Target=FBgn0039420.1 887 962 +
Chr2	stalkie_big_nohaplotig	exon	34850919	34851057	100	+	.	Parent=FBgn0039420.1.mrna1;Target=FBgn0039420.1 963 1101 +
Chr2	stalkie_big_nohaplotig	exon	34851853	34851960	100	+	.	Parent=FBgn0039420.1.mrna1;Target=FBgn0039420.1 1102 1209 +
Chr2	stalkie_big_nohaplotig	CDS	34846786	34846898	.	+	0	Parent=FBgn0039420.1.mrna1;Target=FBgn0039420.1 1 113 +
Chr2	stalkie_big_nohaplotig	CDS	34848532	34848688	.	+	1	Parent=FBgn0039420.1.mrna1;Target=FBgn0039420.1 114 270 +
Chr2	stalkie_big_nohaplotig	CDS	34848800	34848932	.	+	0	Parent=FBgn0039420.1.mrna1;Target=FBgn0039420.1 271 403 +
Chr2	stalkie_big_nohaplotig	CDS	34849002	34849152	.	+	2	Parent=FBgn0039420.1.mrna1;Target=FBgn0039420.1 404 554 +
Chr2	stalkie_big_nohaplotig	CDS	34849860	34849929	.	+	1	Parent=FBgn0039420.1.mrna1;Target=FBgn0039420.1 555 624 +
Chr2	stalkie_big_nohaplotig	CDS	34849988	34850164	.	+	0	Parent=FBgn0039420.1.mrna1;Target=FBgn0039420.1 625 801 +
Chr2	stalkie_big_nohaplotig	CDS	34850225	34850309	.	+	0	Parent=FBgn0039420.1.mrna1;Target=FBgn0039420.1 802 886 +
Chr2	stalkie_big_nohaplotig	CDS	34850773	34850848	.	+	2	Parent=FBgn0039420.1.mrna1;Target=FBgn0039420.1 887 962 +
Chr2	stalkie_big_nohaplotig	CDS	34850919	34851057	.	+	1	Parent=FBgn0039420.1.mrna1;Target=FBgn0039420.1 963 1101 +
Chr2	stalkie_big_nohaplotig	CDS	34851853	34851960	.	+	0	Parent=FBgn0039420.1.mrna1;Target=FBgn0039420.1 1102 1209 +
Chr2	gffcl	locus	34853914	34864736	.	-	.	ID=RLOC_00016264;geneIDs=FBgn0053970.1.path1;transcripts=FBgn0053970.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34853914	34864736	.	-	.	ID=FBgn0053970.1.mrna1;geneID=FBgn0053970.1.path1;Name=FBgn0053970.1;Dir=sensecoverage=100.0;identity=100.0;matches=2318;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016264
Chr2	stalkie_big_nohaplotig	exon	34853914	34854665	100	-	.	Parent=FBgn0053970.1.mrna1;Target=FBgn0053970.1 1568 2319 +
Chr2	stalkie_big_nohaplotig	exon	34855494	34855671	100	-	.	Parent=FBgn0053970.1.mrna1;Target=FBgn0053970.1 1390 1567 +
Chr2	stalkie_big_nohaplotig	exon	34855784	34856003	100	-	.	Parent=FBgn0053970.1.mrna1;Target=FBgn0053970.1 1170 1389 +
Chr2	stalkie_big_nohaplotig	exon	34856072	34856499	100	-	.	Parent=FBgn0053970.1.mrna1;Target=FBgn0053970.1 742 1169 +
Chr2	stalkie_big_nohaplotig	exon	34857108	34857201	100	-	.	Parent=FBgn0053970.1.mrna1;Target=FBgn0053970.1 648 741 +
Chr2	stalkie_big_nohaplotig	exon	34857288	34857550	100	-	.	Parent=FBgn0053970.1.mrna1;Target=FBgn0053970.1 385 647 +
Chr2	stalkie_big_nohaplotig	exon	34859444	34859603	99	-	.	Parent=FBgn0053970.1.mrna1;Target=FBgn0053970.1 225 384 +
Chr2	stalkie_big_nohaplotig	exon	34864513	34864736	100	-	.	Parent=FBgn0053970.1.mrna1;Target=FBgn0053970.1 1 224 +
Chr2	stalkie_big_nohaplotig	CDS	34853914	34854665	.	-	2	Parent=FBgn0053970.1.mrna1;Target=FBgn0053970.1 1568 2319 +
Chr2	stalkie_big_nohaplotig	CDS	34855494	34855671	.	-	0	Parent=FBgn0053970.1.mrna1;Target=FBgn0053970.1 1390 1567 +
Chr2	stalkie_big_nohaplotig	CDS	34855784	34856003	.	-	1	Parent=FBgn0053970.1.mrna1;Target=FBgn0053970.1 1170 1389 +
Chr2	stalkie_big_nohaplotig	CDS	34856072	34856499	.	-	0	Parent=FBgn0053970.1.mrna1;Target=FBgn0053970.1 742 1169 +
Chr2	stalkie_big_nohaplotig	CDS	34857108	34857201	.	-	1	Parent=FBgn0053970.1.mrna1;Target=FBgn0053970.1 648 741 +
Chr2	stalkie_big_nohaplotig	CDS	34857288	34857550	.	-	0	Parent=FBgn0053970.1.mrna1;Target=FBgn0053970.1 385 647 +
Chr2	stalkie_big_nohaplotig	CDS	34859444	34859603	.	-	1	Parent=FBgn0053970.1.mrna1;Target=FBgn0053970.1 225 384 +
Chr2	stalkie_big_nohaplotig	CDS	34864513	34864736	.	-	0	Parent=FBgn0053970.1.mrna1;Target=FBgn0053970.1 1 224 +
Chr2	gffcl	locus	34864869	34865364	.	-	.	ID=RLOC_00016265;geneIDs=comp143237_c0_seq1.path1;transcripts=comp143237_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34864869	34865364	.	-	.	ID=comp143237_c0_seq1.mrna1;geneID=comp143237_c0_seq1.path1;Name=comp143237_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=380;mismatches=0;indels=0;unknowns=0;Target=comp143237_c0_seq1 1 66 +;locus=RLOC_00016265
Chr2	stalkie_big_nohaplotig	exon	34864869	34864890	100	-	.	Parent=comp143237_c0_seq1.mrna1;Target=comp143237_c0_seq1 359 380 +
Chr2	stalkie_big_nohaplotig	exon	34865007	34865364	100	-	.	Parent=comp143237_c0_seq1.mrna1;Target=comp143237_c0_seq1 1 358 +
Chr2	stalkie_big_nohaplotig	CDS	34865299	34865364	.	-	0	Parent=comp143237_c0_seq1.mrna1
Chr2	gffcl	locus	34873039	34877605	.	-	.	ID=RLOC_00016266;geneIDs=FBgn0051030.1.path1;transcripts=FBgn0051030.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34873039	34877605	.	-	.	ID=FBgn0051030.1.mrna1;geneID=FBgn0051030.1.path1;Name=FBgn0051030.1;Dir=sensecoverage=99.7;identity=99.7;matches=1137;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016266
Chr2	stalkie_big_nohaplotig	exon	34873039	34873245	100	-	.	Parent=FBgn0051030.1.mrna1;Target=FBgn0051030.1 937 1143 +
Chr2	stalkie_big_nohaplotig	exon	34874214	34874581	99	-	.	Parent=FBgn0051030.1.mrna1;Target=FBgn0051030.1 569 936 +
Chr2	stalkie_big_nohaplotig	exon	34876827	34877049	100	-	.	Parent=FBgn0051030.1.mrna1;Target=FBgn0051030.1 346 568 +
Chr2	stalkie_big_nohaplotig	exon	34877107	34877374	99	-	.	Parent=FBgn0051030.1.mrna1;Target=FBgn0051030.1 78 345 +
Chr2	stalkie_big_nohaplotig	exon	34877532	34877605	100	-	.	Parent=FBgn0051030.1.mrna1;Target=FBgn0051030.1 4 77 +
Chr2	stalkie_big_nohaplotig	CDS	34873039	34873245	.	-	0	Parent=FBgn0051030.1.mrna1;Target=FBgn0051030.1 937 1143 +
Chr2	stalkie_big_nohaplotig	CDS	34874214	34874581	.	-	2	Parent=FBgn0051030.1.mrna1;Target=FBgn0051030.1 569 936 +
Chr2	stalkie_big_nohaplotig	CDS	34876827	34877049	.	-	0	Parent=FBgn0051030.1.mrna1;Target=FBgn0051030.1 346 568 +
Chr2	stalkie_big_nohaplotig	CDS	34877107	34877374	.	-	1	Parent=FBgn0051030.1.mrna1;Target=FBgn0051030.1 78 345 +
Chr2	stalkie_big_nohaplotig	CDS	34877532	34877605	.	-	0	Parent=FBgn0051030.1.mrna1;Target=FBgn0051030.1 4 77 +
Chr2	gffcl	locus	34873378	34874169	.	-	.	ID=RLOC_00016267;geneIDs=comp149927_c0_seq1.path1;transcripts=comp149927_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34873378	34874169	.	-	.	ID=comp149927_c0_seq1.mrna1;geneID=comp149927_c0_seq1.path1;Name=comp149927_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.4;matches=779;mismatches=11;indels=2;unknowns=0;Target=comp149927_c0_seq1 790 1 .;CDS_Target=comp149927_c0_seq1 789 715 .;locus=RLOC_00016267
Chr2	stalkie_big_nohaplotig	exon	34873378	34874169	98	-	.	Parent=comp149927_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34873379	34873453	.	-	0	Parent=comp149927_c0_seq1.mrna1
Chr2	gffcl	locus	34900612	34901211	.	-	.	ID=RLOC_00016268;geneIDs=comp146880_c0_seq1.path1;transcripts=comp146880_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34900612	34901211	.	-	.	ID=comp146880_c0_seq1.mrna1;geneID=comp146880_c0_seq1.path1;Name=comp146880_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=599;mismatches=1;indels=0;unknowns=0;Target=comp146880_c0_seq1 601 2 .;CDS_Target=comp146880_c0_seq1 179 105 .;locus=RLOC_00016268
Chr2	stalkie_big_nohaplotig	exon	34900612	34901211	99	-	.	Parent=comp146880_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34901034	34901108	.	-	0	Parent=comp146880_c0_seq1.mrna1
Chr2	gffcl	locus	34901779	34915969	.	+	.	ID=RLOC_00016269;geneIDs=FBgn0004839.1.path1;transcripts=FBgn0004839.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34901779	34915969	.	+	.	ID=FBgn0004839.1.mrna1;geneID=FBgn0004839.1.path1;Name=FBgn0004839.1;Dir=sensecoverage=100.0;identity=99.7;matches=3168;mismatches=9;indels=0;unknowns=0;locus=RLOC_00016269
Chr2	stalkie_big_nohaplotig	exon	34901779	34901884	99	+	.	Parent=FBgn0004839.1.mrna1;Target=FBgn0004839.1 1 106 +
Chr2	stalkie_big_nohaplotig	exon	34906583	34906714	100	+	.	Parent=FBgn0004839.1.mrna1;Target=FBgn0004839.1 107 238 +
Chr2	stalkie_big_nohaplotig	exon	34906982	34907143	99	+	.	Parent=FBgn0004839.1.mrna1;Target=FBgn0004839.1 239 400 +
Chr2	stalkie_big_nohaplotig	exon	34912007	34912905	99	+	.	Parent=FBgn0004839.1.mrna1;Target=FBgn0004839.1 401 1299 +
Chr2	stalkie_big_nohaplotig	exon	34912976	34913414	99	+	.	Parent=FBgn0004839.1.mrna1;Target=FBgn0004839.1 1300 1738 +
Chr2	stalkie_big_nohaplotig	exon	34913482	34914335	99	+	.	Parent=FBgn0004839.1.mrna1;Target=FBgn0004839.1 1739 2592 +
Chr2	stalkie_big_nohaplotig	exon	34914391	34914548	100	+	.	Parent=FBgn0004839.1.mrna1;Target=FBgn0004839.1 2593 2750 +
Chr2	stalkie_big_nohaplotig	exon	34915452	34915788	100	+	.	Parent=FBgn0004839.1.mrna1;Target=FBgn0004839.1 2751 3087 +
Chr2	stalkie_big_nohaplotig	exon	34915880	34915969	100	+	.	Parent=FBgn0004839.1.mrna1;Target=FBgn0004839.1 3088 3177 +
Chr2	stalkie_big_nohaplotig	CDS	34901779	34901884	.	+	0	Parent=FBgn0004839.1.mrna1;Target=FBgn0004839.1 1 106 +
Chr2	stalkie_big_nohaplotig	CDS	34906583	34906714	.	+	2	Parent=FBgn0004839.1.mrna1;Target=FBgn0004839.1 107 238 +
Chr2	stalkie_big_nohaplotig	CDS	34906982	34907143	.	+	2	Parent=FBgn0004839.1.mrna1;Target=FBgn0004839.1 239 400 +
Chr2	stalkie_big_nohaplotig	CDS	34912007	34912905	.	+	2	Parent=FBgn0004839.1.mrna1;Target=FBgn0004839.1 401 1299 +
Chr2	stalkie_big_nohaplotig	CDS	34912976	34913414	.	+	0	Parent=FBgn0004839.1.mrna1;Target=FBgn0004839.1 1300 1738 +
Chr2	stalkie_big_nohaplotig	CDS	34913482	34914335	.	+	2	Parent=FBgn0004839.1.mrna1;Target=FBgn0004839.1 1739 2592 +
Chr2	stalkie_big_nohaplotig	CDS	34914391	34914548	.	+	0	Parent=FBgn0004839.1.mrna1;Target=FBgn0004839.1 2593 2750 +
Chr2	stalkie_big_nohaplotig	CDS	34915452	34915788	.	+	1	Parent=FBgn0004839.1.mrna1;Target=FBgn0004839.1 2751 3087 +
Chr2	stalkie_big_nohaplotig	CDS	34915880	34915969	.	+	0	Parent=FBgn0004839.1.mrna1;Target=FBgn0004839.1 3088 3177 +
Chr2	gffcl	locus	34924856	34929563	.	+	.	ID=RLOC_00016271;geneIDs=FBgn0260012.1.path1;transcripts=FBgn0260012.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34924856	34929563	.	+	.	ID=FBgn0260012.1.mrna1;geneID=FBgn0260012.1.path1;Name=FBgn0260012.1;Dir=sensecoverage=100.0;identity=99.9;matches=3657;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016271
Chr2	stalkie_big_nohaplotig	exon	34924856	34924939	100	+	.	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 1 84 +
Chr2	stalkie_big_nohaplotig	exon	34924995	34925380	100	+	.	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 85 470 +
Chr2	stalkie_big_nohaplotig	exon	34925444	34925651	100	+	.	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 471 678 +
Chr2	stalkie_big_nohaplotig	exon	34925724	34925892	100	+	.	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 679 847 +
Chr2	stalkie_big_nohaplotig	exon	34925949	34926690	100	+	.	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 848 1589 +
Chr2	stalkie_big_nohaplotig	exon	34926766	34927029	100	+	.	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 1590 1853 +
Chr2	stalkie_big_nohaplotig	exon	34927089	34927182	100	+	.	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 1854 1947 +
Chr2	stalkie_big_nohaplotig	exon	34927523	34928341	100	+	.	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 1948 2766 +
Chr2	stalkie_big_nohaplotig	exon	34928406	34928542	98	+	.	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 2767 2903 +
Chr2	stalkie_big_nohaplotig	exon	34928606	34928685	100	+	.	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 2904 2983 +
Chr2	stalkie_big_nohaplotig	exon	34928762	34929033	99	+	.	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 2984 3255 +
Chr2	stalkie_big_nohaplotig	exon	34929100	34929408	100	+	.	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 3256 3564 +
Chr2	stalkie_big_nohaplotig	exon	34929468	34929563	100	+	.	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 3565 3660 +
Chr2	stalkie_big_nohaplotig	CDS	34924856	34924939	.	+	0	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	34924995	34925380	.	+	0	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 85 470 +
Chr2	stalkie_big_nohaplotig	CDS	34925444	34925651	.	+	1	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 471 678 +
Chr2	stalkie_big_nohaplotig	CDS	34925724	34925892	.	+	0	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 679 847 +
Chr2	stalkie_big_nohaplotig	CDS	34925949	34926690	.	+	2	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 848 1589 +
Chr2	stalkie_big_nohaplotig	CDS	34926766	34927029	.	+	1	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 1590 1853 +
Chr2	stalkie_big_nohaplotig	CDS	34927089	34927182	.	+	1	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 1854 1947 +
Chr2	stalkie_big_nohaplotig	CDS	34927523	34928341	.	+	0	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 1948 2766 +
Chr2	stalkie_big_nohaplotig	CDS	34928406	34928542	.	+	0	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 2767 2903 +
Chr2	stalkie_big_nohaplotig	CDS	34928606	34928685	.	+	1	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 2904 2983 +
Chr2	stalkie_big_nohaplotig	CDS	34928762	34929033	.	+	2	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 2984 3255 +
Chr2	stalkie_big_nohaplotig	CDS	34929100	34929408	.	+	0	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 3256 3564 +
Chr2	stalkie_big_nohaplotig	CDS	34929468	34929563	.	+	0	Parent=FBgn0260012.1.mrna1;Target=FBgn0260012.1 3565 3660 +
Chr2	gffcl	locus	34930537	34931849	.	-	.	ID=RLOC_00016272;geneIDs=FBgn0010339.1.path1;transcripts=FBgn0010339.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34930537	34931849	.	-	.	ID=FBgn0010339.1.mrna1;geneID=FBgn0010339.1.path1;Name=FBgn0010339.1;Dir=sensecoverage=99.3;identity=99.9;matches=1062;mismatches=0;indels=1;unknowns=0;Target=FBgn0010339.1 9 32 +;locus=RLOC_00016272
Chr2	stalkie_big_nohaplotig	exon	34930537	34930636	100	-	.	Parent=FBgn0010339.1.mrna1;Target=FBgn0010339.1 972 1071 +
Chr2	stalkie_big_nohaplotig	exon	34930691	34930813	100	-	.	Parent=FBgn0010339.1.mrna1;Target=FBgn0010339.1 849 971 +
Chr2	stalkie_big_nohaplotig	exon	34930872	34931410	100	-	.	Parent=FBgn0010339.1.mrna1;Target=FBgn0010339.1 310 848 +
Chr2	stalkie_big_nohaplotig	exon	34931492	34931667	100	-	.	Parent=FBgn0010339.1.mrna1;Target=FBgn0010339.1 134 309 +
Chr2	stalkie_big_nohaplotig	exon	34931726	34931849	99	-	.	Parent=FBgn0010339.1.mrna1;Target=FBgn0010339.1 9 133 +
Chr2	stalkie_big_nohaplotig	CDS	34931827	34931849	.	-	0	Parent=FBgn0010339.1.mrna1
Chr2	gffcl	locus	34934031	34941166	.	.	.	ID=RLOC_00016273;geneIDs=FBgn0037690.1.path1,comp144161_c0_seq1.path1,comp149482_c0_seq1.path1,comp155351_c0_seq1.path1;transcripts=comp155351_c0_seq1.mrna1,comp149482_c0_seq1.mrna1,FBgn0037690.1.mrna1,comp144161_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34934031	34941166	.	-	.	ID=comp155351_c0_seq1.mrna1;geneID=comp155351_c0_seq1.path1;Name=comp155351_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.8;matches=2185;mismatches=5;indels=0;unknowns=0;locus=RLOC_00016273
Chr2	stalkie_big_nohaplotig	exon	34934031	34934275	98	-	.	Parent=comp155351_c0_seq1.mrna1;Target=comp155351_c0_seq1 2192 1948 .
Chr2	stalkie_big_nohaplotig	exon	34934457	34934676	99	-	.	Parent=comp155351_c0_seq1.mrna1;Target=comp155351_c0_seq1 1947 1728 .
Chr2	stalkie_big_nohaplotig	exon	34936147	34936196	98	-	.	Parent=comp155351_c0_seq1.mrna1;Target=comp155351_c0_seq1 1727 1678 .
Chr2	stalkie_big_nohaplotig	exon	34936279	34936379	100	-	.	Parent=comp155351_c0_seq1.mrna1;Target=comp155351_c0_seq1 1677 1577 .
Chr2	stalkie_big_nohaplotig	exon	34938706	34939131	100	-	.	Parent=comp155351_c0_seq1.mrna1;Target=comp155351_c0_seq1 1576 1151 .
Chr2	stalkie_big_nohaplotig	exon	34939189	34939564	100	-	.	Parent=comp155351_c0_seq1.mrna1;Target=comp155351_c0_seq1 1150 775 .
Chr2	stalkie_big_nohaplotig	exon	34940337	34940737	100	-	.	Parent=comp155351_c0_seq1.mrna1;Target=comp155351_c0_seq1 774 374 .
Chr2	stalkie_big_nohaplotig	exon	34940796	34941166	100	-	.	Parent=comp155351_c0_seq1.mrna1;Target=comp155351_c0_seq1 373 3 .
Chr2	stalkie_big_nohaplotig	CDS	34934179	34934275	.	-	1	Parent=comp155351_c0_seq1.mrna1;Target=comp155351_c0_seq1 2044 1948 .
Chr2	stalkie_big_nohaplotig	CDS	34934457	34934676	.	-	2	Parent=comp155351_c0_seq1.mrna1;Target=comp155351_c0_seq1 1947 1728 .
Chr2	stalkie_big_nohaplotig	CDS	34936147	34936153	.	-	0	Parent=comp155351_c0_seq1.mrna1;Target=comp155351_c0_seq1 1727 1721 .
Chr2	stalkie_big_nohaplotig	mRNA	34936343	34936872	.	-	.	ID=comp149482_c0_seq1.mrna1;geneID=comp149482_c0_seq1.path1;Name=comp149482_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=526;mismatches=4;indels=1;unknowns=0;Target=comp149482_c0_seq1 531 1 .;CDS_Target=comp149482_c0_seq1 39 1 .;locus=RLOC_00016273
Chr2	stalkie_big_nohaplotig	exon	34936343	34936872	99	-	.	Parent=comp149482_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34936834	34936872	.	-	0	Parent=comp149482_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34938987	34941069	.	+	.	ID=FBgn0037690.1.mrna1;geneID=FBgn0037690.1.path1;Name=FBgn0037690.1;Dir=sensecoverage=100.0;identity=100.0;matches=1038;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016273
Chr2	stalkie_big_nohaplotig	exon	34938987	34939131	100	+	.	Parent=FBgn0037690.1.mrna1;Target=FBgn0037690.1 1 145 +
Chr2	stalkie_big_nohaplotig	exon	34939347	34939564	100	+	.	Parent=FBgn0037690.1.mrna1;Target=FBgn0037690.1 146 363 +
Chr2	stalkie_big_nohaplotig	exon	34940337	34940737	100	+	.	Parent=FBgn0037690.1.mrna1;Target=FBgn0037690.1 364 764 +
Chr2	stalkie_big_nohaplotig	exon	34940796	34941069	100	+	.	Parent=FBgn0037690.1.mrna1;Target=FBgn0037690.1 765 1038 +
Chr2	stalkie_big_nohaplotig	CDS	34938987	34939131	.	+	0	Parent=FBgn0037690.1.mrna1;Target=FBgn0037690.1 1 145 +
Chr2	stalkie_big_nohaplotig	CDS	34939347	34939564	.	+	2	Parent=FBgn0037690.1.mrna1;Target=FBgn0037690.1 146 363 +
Chr2	stalkie_big_nohaplotig	CDS	34940337	34940737	.	+	0	Parent=FBgn0037690.1.mrna1;Target=FBgn0037690.1 364 764 +
Chr2	stalkie_big_nohaplotig	CDS	34940796	34941069	.	+	1	Parent=FBgn0037690.1.mrna1;Target=FBgn0037690.1 765 1038 +
Chr2	stalkie_big_nohaplotig	mRNA	34939544	34940108	.	+	.	ID=comp144161_c0_seq1.mrna1;geneID=comp144161_c0_seq1.path1;Name=comp144161_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.6;matches=563;mismatches=2;indels=0;unknowns=0;Target=comp144161_c0_seq1 565 1 .;CDS_Target=comp144161_c0_seq1 357 205 .;locus=RLOC_00016273
Chr2	stalkie_big_nohaplotig	exon	34939544	34940108	99	+	.	Parent=comp144161_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34939748	34939900	.	+	0	Parent=comp144161_c0_seq1.mrna1
Chr2	gffcl	locus	34946787	34947689	.	-	.	ID=RLOC_00016275;geneIDs=comp159255_c0_seq1.path1;transcripts=comp159255_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34946787	34947689	.	-	.	ID=comp159255_c0_seq1.mrna1;geneID=comp159255_c0_seq1.path1;Name=comp159255_c0_seq1;Dir=indeterminatecoverage=98.3;identity=98.7;matches=896;mismatches=7;indels=5;unknowns=0;Target=comp159255_c0_seq1 924 17 .;CDS_Target=comp159255_c0_seq1 750 607 .;locus=RLOC_00016275
Chr2	stalkie_big_nohaplotig	exon	34946787	34947689	98	-	.	Parent=comp159255_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34946961	34947104	.	-	0	Parent=comp159255_c0_seq1.mrna1
Chr2	gffcl	locus	34950022	34950445	.	-	.	ID=RLOC_00016276;geneIDs=comp139319_c0_seq1.path1;transcripts=comp139319_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34950022	34950445	.	-	.	ID=comp139319_c0_seq1.mrna1;geneID=comp139319_c0_seq1.path1;Name=comp139319_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=424;mismatches=0;indels=0;unknowns=0;Target=comp139319_c0_seq1 424 1 .;CDS_Target=comp139319_c0_seq1 127 2 .;locus=RLOC_00016276
Chr2	stalkie_big_nohaplotig	exon	34950022	34950445	100	-	.	Parent=comp139319_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34950319	34950444	.	-	0	Parent=comp139319_c0_seq1.mrna1
Chr2	gffcl	locus	34951367	34954189	.	-	.	ID=RLOC_00016277;geneIDs=FBgn0002552.1.path1;transcripts=FBgn0002552.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34951367	34954189	.	-	.	ID=FBgn0002552.1.mrna1;geneID=FBgn0002552.1.path1;Name=FBgn0002552.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2820;mismatches=3;indels=0;unknowns=0;Target=FBgn0002552.1 2823 1 .;locus=RLOC_00016277
Chr2	stalkie_big_nohaplotig	exon	34951367	34954189	99	-	.	Parent=FBgn0002552.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34951367	34954189	.	-	0	Parent=FBgn0002552.1.mrna1
Chr2	gffcl	locus	34956487	34959145	.	+	.	ID=RLOC_00016278;geneIDs=FBgn0003074.1.path1;transcripts=FBgn0003074.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34956487	34959145	.	+	.	ID=FBgn0003074.1.mrna1;geneID=FBgn0003074.1.path1;Name=FBgn0003074.1;Dir=sensecoverage=100.0;identity=100.0;matches=1719;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016278
Chr2	stalkie_big_nohaplotig	exon	34956487	34956665	100	+	.	Parent=FBgn0003074.1.mrna1;Target=FBgn0003074.1 1 179 +
Chr2	stalkie_big_nohaplotig	exon	34957320	34957902	100	+	.	Parent=FBgn0003074.1.mrna1;Target=FBgn0003074.1 180 762 +
Chr2	stalkie_big_nohaplotig	exon	34957966	34958205	100	+	.	Parent=FBgn0003074.1.mrna1;Target=FBgn0003074.1 763 1002 +
Chr2	stalkie_big_nohaplotig	exon	34958268	34958799	100	+	.	Parent=FBgn0003074.1.mrna1;Target=FBgn0003074.1 1003 1534 +
Chr2	stalkie_big_nohaplotig	exon	34958961	34959145	100	+	.	Parent=FBgn0003074.1.mrna1;Target=FBgn0003074.1 1535 1719 +
Chr2	stalkie_big_nohaplotig	CDS	34956487	34956665	.	+	0	Parent=FBgn0003074.1.mrna1;Target=FBgn0003074.1 1 179 +
Chr2	stalkie_big_nohaplotig	CDS	34957320	34957902	.	+	1	Parent=FBgn0003074.1.mrna1;Target=FBgn0003074.1 180 762 +
Chr2	stalkie_big_nohaplotig	CDS	34957966	34958205	.	+	0	Parent=FBgn0003074.1.mrna1;Target=FBgn0003074.1 763 1002 +
Chr2	stalkie_big_nohaplotig	CDS	34958268	34958799	.	+	0	Parent=FBgn0003074.1.mrna1;Target=FBgn0003074.1 1003 1534 +
Chr2	stalkie_big_nohaplotig	CDS	34958961	34959145	.	+	2	Parent=FBgn0003074.1.mrna1;Target=FBgn0003074.1 1535 1719 +
Chr2	gffcl	locus	34959764	34961874	.	-	.	ID=RLOC_00016279;geneIDs=FBgn0050349.2.path1;transcripts=FBgn0050349.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34959764	34961874	.	-	.	ID=FBgn0050349.2.mrna1;geneID=FBgn0050349.2.path1;Name=FBgn0050349.2;Dir=sensecoverage=99.9;identity=99.5;matches=1685;mismatches=8;indels=0;unknowns=0;locus=RLOC_00016279
Chr2	stalkie_big_nohaplotig	exon	34959764	34959879	100	-	.	Parent=FBgn0050349.2.mrna1;Target=FBgn0050349.2 1578 1693 +
Chr2	stalkie_big_nohaplotig	exon	34959946	34960089	100	-	.	Parent=FBgn0050349.2.mrna1;Target=FBgn0050349.2 1434 1577 +
Chr2	stalkie_big_nohaplotig	exon	34960148	34960273	96	-	.	Parent=FBgn0050349.2.mrna1;Target=FBgn0050349.2 1308 1433 +
Chr2	stalkie_big_nohaplotig	exon	34960341	34960790	99	-	.	Parent=FBgn0050349.2.mrna1;Target=FBgn0050349.2 858 1307 +
Chr2	stalkie_big_nohaplotig	exon	34960848	34961374	99	-	.	Parent=FBgn0050349.2.mrna1;Target=FBgn0050349.2 331 857 +
Chr2	stalkie_big_nohaplotig	exon	34961475	34961579	100	-	.	Parent=FBgn0050349.2.mrna1;Target=FBgn0050349.2 226 330 +
Chr2	stalkie_big_nohaplotig	exon	34961650	34961874	100	-	.	Parent=FBgn0050349.2.mrna1;Target=FBgn0050349.2 1 225 +
Chr2	stalkie_big_nohaplotig	CDS	34959765	34959879	.	-	1	Parent=FBgn0050349.2.mrna1;Target=FBgn0050349.2 1578 1692 +
Chr2	stalkie_big_nohaplotig	CDS	34959946	34960089	.	-	1	Parent=FBgn0050349.2.mrna1;Target=FBgn0050349.2 1434 1577 +
Chr2	stalkie_big_nohaplotig	CDS	34960148	34960273	.	-	1	Parent=FBgn0050349.2.mrna1;Target=FBgn0050349.2 1308 1433 +
Chr2	stalkie_big_nohaplotig	CDS	34960341	34960790	.	-	1	Parent=FBgn0050349.2.mrna1;Target=FBgn0050349.2 858 1307 +
Chr2	stalkie_big_nohaplotig	CDS	34960848	34961374	.	-	0	Parent=FBgn0050349.2.mrna1;Target=FBgn0050349.2 331 857 +
Chr2	stalkie_big_nohaplotig	CDS	34961475	34961579	.	-	0	Parent=FBgn0050349.2.mrna1;Target=FBgn0050349.2 226 330 +
Chr2	stalkie_big_nohaplotig	CDS	34961650	34961874	.	-	0	Parent=FBgn0050349.2.mrna1;Target=FBgn0050349.2 1 225 +
Chr2	gffcl	locus	34964422	34966543	.	-	.	ID=RLOC_00016280;geneIDs=FBgn0050349.1.path1;transcripts=FBgn0050349.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34964422	34966543	.	-	.	ID=FBgn0050349.1.mrna1;geneID=FBgn0050349.1.path1;Name=FBgn0050349.1;Dir=sensecoverage=100.0;identity=100.0;matches=1617;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016280
Chr2	stalkie_big_nohaplotig	exon	34964422	34964528	100	-	.	Parent=FBgn0050349.1.mrna1;Target=FBgn0050349.1 1511 1617 +
Chr2	stalkie_big_nohaplotig	exon	34964617	34964711	100	-	.	Parent=FBgn0050349.1.mrna1;Target=FBgn0050349.1 1416 1510 +
Chr2	stalkie_big_nohaplotig	exon	34964830	34964979	100	-	.	Parent=FBgn0050349.1.mrna1;Target=FBgn0050349.1 1266 1415 +
Chr2	stalkie_big_nohaplotig	exon	34965039	34965167	100	-	.	Parent=FBgn0050349.1.mrna1;Target=FBgn0050349.1 1137 1265 +
Chr2	stalkie_big_nohaplotig	exon	34965232	34965702	100	-	.	Parent=FBgn0050349.1.mrna1;Target=FBgn0050349.1 666 1136 +
Chr2	stalkie_big_nohaplotig	exon	34965763	34966289	100	-	.	Parent=FBgn0050349.1.mrna1;Target=FBgn0050349.1 139 665 +
Chr2	stalkie_big_nohaplotig	exon	34966351	34966451	100	-	.	Parent=FBgn0050349.1.mrna1;Target=FBgn0050349.1 38 138 +
Chr2	stalkie_big_nohaplotig	exon	34966507	34966543	100	-	.	Parent=FBgn0050349.1.mrna1;Target=FBgn0050349.1 1 37 +
Chr2	stalkie_big_nohaplotig	CDS	34964422	34964528	.	-	2	Parent=FBgn0050349.1.mrna1;Target=FBgn0050349.1 1511 1617 +
Chr2	stalkie_big_nohaplotig	CDS	34964617	34964711	.	-	1	Parent=FBgn0050349.1.mrna1;Target=FBgn0050349.1 1416 1510 +
Chr2	stalkie_big_nohaplotig	CDS	34964830	34964979	.	-	1	Parent=FBgn0050349.1.mrna1;Target=FBgn0050349.1 1266 1415 +
Chr2	stalkie_big_nohaplotig	CDS	34965039	34965167	.	-	1	Parent=FBgn0050349.1.mrna1;Target=FBgn0050349.1 1137 1265 +
Chr2	stalkie_big_nohaplotig	CDS	34965232	34965702	.	-	1	Parent=FBgn0050349.1.mrna1;Target=FBgn0050349.1 666 1136 +
Chr2	stalkie_big_nohaplotig	CDS	34965763	34966289	.	-	0	Parent=FBgn0050349.1.mrna1;Target=FBgn0050349.1 139 665 +
Chr2	stalkie_big_nohaplotig	CDS	34966351	34966451	.	-	2	Parent=FBgn0050349.1.mrna1;Target=FBgn0050349.1 38 138 +
Chr2	stalkie_big_nohaplotig	CDS	34966507	34966543	.	-	0	Parent=FBgn0050349.1.mrna1;Target=FBgn0050349.1 1 37 +
Chr2	gffcl	locus	34967726	34968400	.	+	.	ID=RLOC_00016281;geneIDs=FBgn0033341.1.path1;transcripts=FBgn0033341.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34967726	34968400	.	+	.	ID=FBgn0033341.1.mrna1;geneID=FBgn0033341.1.path1;Name=FBgn0033341.1;Dir=sensecoverage=100.0;identity=100.0;matches=615;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016281
Chr2	stalkie_big_nohaplotig	exon	34967726	34968158	100	+	.	Parent=FBgn0033341.1.mrna1;Target=FBgn0033341.1 1 433 +
Chr2	stalkie_big_nohaplotig	exon	34968219	34968400	100	+	.	Parent=FBgn0033341.1.mrna1;Target=FBgn0033341.1 434 615 +
Chr2	stalkie_big_nohaplotig	CDS	34967726	34968158	.	+	0	Parent=FBgn0033341.1.mrna1;Target=FBgn0033341.1 1 433 +
Chr2	stalkie_big_nohaplotig	CDS	34968219	34968400	.	+	2	Parent=FBgn0033341.1.mrna1;Target=FBgn0033341.1 434 615 +
Chr2	gffcl	locus	34970657	34976664	.	+	.	ID=RLOC_00016282;geneIDs=FBgn0033352.1.path1;transcripts=FBgn0033352.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34970657	34976664	.	+	.	ID=FBgn0033352.1.mrna1;geneID=FBgn0033352.1.path1;Name=FBgn0033352.1;Dir=sensecoverage=100.0;identity=100.0;matches=3756;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016282
Chr2	stalkie_big_nohaplotig	exon	34970657	34970723	100	+	.	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 1 67 +
Chr2	stalkie_big_nohaplotig	exon	34970789	34970979	100	+	.	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 68 258 +
Chr2	stalkie_big_nohaplotig	exon	34971292	34971461	100	+	.	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 259 428 +
Chr2	stalkie_big_nohaplotig	exon	34971567	34971684	100	+	.	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 429 546 +
Chr2	stalkie_big_nohaplotig	exon	34971803	34972828	100	+	.	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 547 1572 +
Chr2	stalkie_big_nohaplotig	exon	34972901	34973015	100	+	.	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 1573 1687 +
Chr2	stalkie_big_nohaplotig	exon	34973081	34973202	100	+	.	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 1688 1809 +
Chr2	stalkie_big_nohaplotig	exon	34973261	34973357	100	+	.	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 1810 1906 +
Chr2	stalkie_big_nohaplotig	exon	34973420	34973503	100	+	.	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 1907 1990 +
Chr2	stalkie_big_nohaplotig	exon	34973556	34973674	100	+	.	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 1991 2109 +
Chr2	stalkie_big_nohaplotig	exon	34973728	34973901	100	+	.	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 2110 2283 +
Chr2	stalkie_big_nohaplotig	exon	34973967	34974160	100	+	.	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 2284 2477 +
Chr2	stalkie_big_nohaplotig	exon	34974230	34974380	100	+	.	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 2478 2628 +
Chr2	stalkie_big_nohaplotig	exon	34975067	34975151	100	+	.	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 2629 2713 +
Chr2	stalkie_big_nohaplotig	exon	34975216	34975393	100	+	.	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 2714 2891 +
Chr2	stalkie_big_nohaplotig	exon	34975536	34975695	100	+	.	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 2892 3051 +
Chr2	stalkie_big_nohaplotig	exon	34975761	34975969	100	+	.	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 3052 3260 +
Chr2	stalkie_big_nohaplotig	exon	34976031	34976252	100	+	.	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 3261 3482 +
Chr2	stalkie_big_nohaplotig	exon	34976310	34976419	100	+	.	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 3483 3592 +
Chr2	stalkie_big_nohaplotig	exon	34976501	34976664	100	+	.	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 3593 3756 +
Chr2	stalkie_big_nohaplotig	CDS	34970657	34970723	.	+	0	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 1 67 +
Chr2	stalkie_big_nohaplotig	CDS	34970789	34970979	.	+	2	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 68 258 +
Chr2	stalkie_big_nohaplotig	CDS	34971292	34971461	.	+	0	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 259 428 +
Chr2	stalkie_big_nohaplotig	CDS	34971567	34971684	.	+	1	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 429 546 +
Chr2	stalkie_big_nohaplotig	CDS	34971803	34972828	.	+	0	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 547 1572 +
Chr2	stalkie_big_nohaplotig	CDS	34972901	34973015	.	+	0	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 1573 1687 +
Chr2	stalkie_big_nohaplotig	CDS	34973081	34973202	.	+	2	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 1688 1809 +
Chr2	stalkie_big_nohaplotig	CDS	34973261	34973357	.	+	0	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 1810 1906 +
Chr2	stalkie_big_nohaplotig	CDS	34973420	34973503	.	+	2	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 1907 1990 +
Chr2	stalkie_big_nohaplotig	CDS	34973556	34973674	.	+	2	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 1991 2109 +
Chr2	stalkie_big_nohaplotig	CDS	34973728	34973901	.	+	0	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 2110 2283 +
Chr2	stalkie_big_nohaplotig	CDS	34973967	34974160	.	+	0	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 2284 2477 +
Chr2	stalkie_big_nohaplotig	CDS	34974230	34974380	.	+	1	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 2478 2628 +
Chr2	stalkie_big_nohaplotig	CDS	34975067	34975151	.	+	0	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 2629 2713 +
Chr2	stalkie_big_nohaplotig	CDS	34975216	34975393	.	+	2	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 2714 2891 +
Chr2	stalkie_big_nohaplotig	CDS	34975536	34975695	.	+	1	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 2892 3051 +
Chr2	stalkie_big_nohaplotig	CDS	34975761	34975969	.	+	0	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 3052 3260 +
Chr2	stalkie_big_nohaplotig	CDS	34976031	34976252	.	+	1	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 3261 3482 +
Chr2	stalkie_big_nohaplotig	CDS	34976310	34976419	.	+	1	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 3483 3592 +
Chr2	stalkie_big_nohaplotig	CDS	34976501	34976664	.	+	2	Parent=FBgn0033352.1.mrna1;Target=FBgn0033352.1 3593 3756 +
Chr2	gffcl	locus	34977633	34979756	.	-	.	ID=RLOC_00016283;geneIDs=FBgn0034650.1.path1;transcripts=FBgn0034650.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34977633	34979756	.	-	.	ID=FBgn0034650.1.mrna1;geneID=FBgn0034650.1.path1;Name=FBgn0034650.1;Dir=sensecoverage=100.0;identity=99.9;matches=1265;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016283
Chr2	stalkie_big_nohaplotig	exon	34977633	34978699	99	-	.	Parent=FBgn0034650.1.mrna1;Target=FBgn0034650.1 200 1266 +
Chr2	stalkie_big_nohaplotig	exon	34979372	34979444	100	-	.	Parent=FBgn0034650.1.mrna1;Target=FBgn0034650.1 127 199 +
Chr2	stalkie_big_nohaplotig	exon	34979631	34979756	100	-	.	Parent=FBgn0034650.1.mrna1;Target=FBgn0034650.1 1 126 +
Chr2	stalkie_big_nohaplotig	CDS	34977633	34978699	.	-	2	Parent=FBgn0034650.1.mrna1;Target=FBgn0034650.1 200 1266 +
Chr2	stalkie_big_nohaplotig	CDS	34979372	34979444	.	-	0	Parent=FBgn0034650.1.mrna1;Target=FBgn0034650.1 127 199 +
Chr2	stalkie_big_nohaplotig	CDS	34979631	34979756	.	-	0	Parent=FBgn0034650.1.mrna1;Target=FBgn0034650.1 1 126 +
Chr2	gffcl	locus	34982675	34984099	.	+	.	ID=RLOC_00016284;geneIDs=FBgn0034649.1.path1;transcripts=FBgn0034649.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34982675	34984099	.	+	.	ID=FBgn0034649.1.mrna1;geneID=FBgn0034649.1.path1;Name=FBgn0034649.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1425;mismatches=0;indels=0;unknowns=0;Target=FBgn0034649.1 1425 1 .;locus=RLOC_00016284
Chr2	stalkie_big_nohaplotig	exon	34982675	34984099	100	+	.	Parent=FBgn0034649.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	34982675	34984099	.	+	0	Parent=FBgn0034649.1.mrna1
Chr2	gffcl	locus	34985177	34987277	.	+	.	ID=RLOC_00016285;geneIDs=FBgn0034655.3.path1;transcripts=FBgn0034655.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34985177	34987277	.	+	.	ID=FBgn0034655.3.mrna1;geneID=FBgn0034655.3.path1;Name=FBgn0034655.3;Dir=sensecoverage=100.0;identity=100.0;matches=984;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016285
Chr2	stalkie_big_nohaplotig	exon	34985177	34985380	100	+	.	Parent=FBgn0034655.3.mrna1;Target=FBgn0034655.3 1 204 +
Chr2	stalkie_big_nohaplotig	exon	34986387	34986968	100	+	.	Parent=FBgn0034655.3.mrna1;Target=FBgn0034655.3 205 786 +
Chr2	stalkie_big_nohaplotig	exon	34987024	34987170	100	+	.	Parent=FBgn0034655.3.mrna1;Target=FBgn0034655.3 787 933 +
Chr2	stalkie_big_nohaplotig	exon	34987227	34987277	100	+	.	Parent=FBgn0034655.3.mrna1;Target=FBgn0034655.3 934 984 +
Chr2	stalkie_big_nohaplotig	CDS	34985177	34985380	.	+	0	Parent=FBgn0034655.3.mrna1;Target=FBgn0034655.3 1 204 +
Chr2	stalkie_big_nohaplotig	CDS	34986387	34986968	.	+	0	Parent=FBgn0034655.3.mrna1;Target=FBgn0034655.3 205 786 +
Chr2	stalkie_big_nohaplotig	CDS	34987024	34987170	.	+	0	Parent=FBgn0034655.3.mrna1;Target=FBgn0034655.3 787 933 +
Chr2	stalkie_big_nohaplotig	CDS	34987227	34987277	.	+	0	Parent=FBgn0034655.3.mrna1;Target=FBgn0034655.3 934 984 +
Chr2	gffcl	locus	34987432	34988355	.	-	.	ID=RLOC_00016286;geneIDs=FBgn0027360.1.path1;transcripts=FBgn0027360.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34987432	34988355	.	-	.	ID=FBgn0027360.1.mrna1;geneID=FBgn0027360.1.path1;Name=FBgn0027360.1;Dir=sensecoverage=100.0;identity=100.0;matches=321;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016286
Chr2	stalkie_big_nohaplotig	exon	34987432	34987556	100	-	.	Parent=FBgn0027360.1.mrna1;Target=FBgn0027360.1 197 321 +
Chr2	stalkie_big_nohaplotig	exon	34988160	34988355	100	-	.	Parent=FBgn0027360.1.mrna1;Target=FBgn0027360.1 1 196 +
Chr2	stalkie_big_nohaplotig	CDS	34987432	34987556	.	-	2	Parent=FBgn0027360.1.mrna1;Target=FBgn0027360.1 197 321 +
Chr2	stalkie_big_nohaplotig	CDS	34988160	34988355	.	-	0	Parent=FBgn0027360.1.mrna1;Target=FBgn0027360.1 1 196 +
Chr2	gffcl	locus	34991189	34993144	.	+	.	ID=RLOC_00016287;geneIDs=FBgn0034062.1.path1;transcripts=FBgn0034062.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34991189	34993144	.	+	.	ID=FBgn0034062.1.mrna1;geneID=FBgn0034062.1.path1;Name=FBgn0034062.1;Dir=sensecoverage=100.0;identity=100.0;matches=1737;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016287
Chr2	stalkie_big_nohaplotig	exon	34991189	34991314	100	+	.	Parent=FBgn0034062.1.mrna1;Target=FBgn0034062.1 1 126 +
Chr2	stalkie_big_nohaplotig	exon	34991365	34992395	100	+	.	Parent=FBgn0034062.1.mrna1;Target=FBgn0034062.1 127 1157 +
Chr2	stalkie_big_nohaplotig	exon	34992450	34992714	100	+	.	Parent=FBgn0034062.1.mrna1;Target=FBgn0034062.1 1158 1422 +
Chr2	stalkie_big_nohaplotig	exon	34992774	34992887	100	+	.	Parent=FBgn0034062.1.mrna1;Target=FBgn0034062.1 1423 1536 +
Chr2	stalkie_big_nohaplotig	exon	34992944	34993144	100	+	.	Parent=FBgn0034062.1.mrna1;Target=FBgn0034062.1 1537 1737 +
Chr2	stalkie_big_nohaplotig	CDS	34991189	34991314	.	+	0	Parent=FBgn0034062.1.mrna1;Target=FBgn0034062.1 1 126 +
Chr2	stalkie_big_nohaplotig	CDS	34991365	34992395	.	+	0	Parent=FBgn0034062.1.mrna1;Target=FBgn0034062.1 127 1157 +
Chr2	stalkie_big_nohaplotig	CDS	34992450	34992714	.	+	1	Parent=FBgn0034062.1.mrna1;Target=FBgn0034062.1 1158 1422 +
Chr2	stalkie_big_nohaplotig	CDS	34992774	34992887	.	+	0	Parent=FBgn0034062.1.mrna1;Target=FBgn0034062.1 1423 1536 +
Chr2	stalkie_big_nohaplotig	CDS	34992944	34993144	.	+	0	Parent=FBgn0034062.1.mrna1;Target=FBgn0034062.1 1537 1737 +
Chr2	gffcl	locus	34994164	34997652	.	-	.	ID=RLOC_00016288;geneIDs=FBgn0086757.1.path1;transcripts=FBgn0086757.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	34994164	34997652	.	-	.	ID=FBgn0086757.1.mrna1;geneID=FBgn0086757.1.path1;Name=FBgn0086757.1;Dir=sensecoverage=100.0;identity=100.0;matches=1944;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016288
Chr2	stalkie_big_nohaplotig	exon	34994164	34994322	100	-	.	Parent=FBgn0086757.1.mrna1;Target=FBgn0086757.1 1786 1944 +
Chr2	stalkie_big_nohaplotig	exon	34994378	34994620	100	-	.	Parent=FBgn0086757.1.mrna1;Target=FBgn0086757.1 1543 1785 +
Chr2	stalkie_big_nohaplotig	exon	34994896	34995330	100	-	.	Parent=FBgn0086757.1.mrna1;Target=FBgn0086757.1 1108 1542 +
Chr2	stalkie_big_nohaplotig	exon	34995619	34995717	100	-	.	Parent=FBgn0086757.1.mrna1;Target=FBgn0086757.1 1009 1107 +
Chr2	stalkie_big_nohaplotig	exon	34995773	34996198	100	-	.	Parent=FBgn0086757.1.mrna1;Target=FBgn0086757.1 583 1008 +
Chr2	stalkie_big_nohaplotig	exon	34997015	34997374	100	-	.	Parent=FBgn0086757.1.mrna1;Target=FBgn0086757.1 223 582 +
Chr2	stalkie_big_nohaplotig	exon	34997431	34997652	100	-	.	Parent=FBgn0086757.1.mrna1;Target=FBgn0086757.1 1 222 +
Chr2	stalkie_big_nohaplotig	CDS	34994164	34994322	.	-	0	Parent=FBgn0086757.1.mrna1;Target=FBgn0086757.1 1786 1944 +
Chr2	stalkie_big_nohaplotig	CDS	34994378	34994620	.	-	0	Parent=FBgn0086757.1.mrna1;Target=FBgn0086757.1 1543 1785 +
Chr2	stalkie_big_nohaplotig	CDS	34994896	34995330	.	-	0	Parent=FBgn0086757.1.mrna1;Target=FBgn0086757.1 1108 1542 +
Chr2	stalkie_big_nohaplotig	CDS	34995619	34995717	.	-	0	Parent=FBgn0086757.1.mrna1;Target=FBgn0086757.1 1009 1107 +
Chr2	stalkie_big_nohaplotig	CDS	34995773	34996198	.	-	0	Parent=FBgn0086757.1.mrna1;Target=FBgn0086757.1 583 1008 +
Chr2	stalkie_big_nohaplotig	CDS	34997015	34997374	.	-	0	Parent=FBgn0086757.1.mrna1;Target=FBgn0086757.1 223 582 +
Chr2	stalkie_big_nohaplotig	CDS	34997431	34997652	.	-	0	Parent=FBgn0086757.1.mrna1;Target=FBgn0086757.1 1 222 +
Chr2	gffcl	locus	35003140	35008193	.	+	.	ID=RLOC_00016289;geneIDs=comp146713_c0_seq1.path1;transcripts=comp146713_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35003140	35008193	.	+	.	ID=comp146713_c0_seq1.mrna1;geneID=comp146713_c0_seq1.path1;Name=comp146713_c0_seq1;Dir=sensecoverage=100.0;identity=99.2;matches=631;mismatches=3;indels=2;unknowns=0;Target=comp146713_c0_seq1 366 530 +;locus=RLOC_00016289
Chr2	stalkie_big_nohaplotig	exon	35003140	35003252	100	+	.	Parent=comp146713_c0_seq1.mrna1;Target=comp146713_c0_seq1 1 113 +
Chr2	stalkie_big_nohaplotig	exon	35007673	35008193	99	+	.	Parent=comp146713_c0_seq1.mrna1;Target=comp146713_c0_seq1 114 636 +
Chr2	stalkie_big_nohaplotig	CDS	35007923	35008087	.	+	0	Parent=comp146713_c0_seq1.mrna1
Chr2	gffcl	locus	35008295	35030666	.	+	.	ID=RLOC_00016290;geneIDs=FBgn0013765.1.path1,comp117992_c0_seq1.path1;transcripts=comp117992_c0_seq1.mrna1,FBgn0013765.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35008295	35020829	.	+	.	ID=comp117992_c0_seq1.mrna1;geneID=comp117992_c0_seq1.path1;Name=comp117992_c0_seq1;Dir=sensecoverage=65.7;identity=96.9;matches=253;mismatches=2;indels=6;unknowns=0;locus=RLOC_00016290
Chr2	stalkie_big_nohaplotig	exon	35008295	35008511	96	+	.	Parent=comp117992_c0_seq1.mrna1;Target=comp117992_c0_seq1 131 341 +
Chr2	stalkie_big_nohaplotig	exon	35020786	35020829	97	+	.	Parent=comp117992_c0_seq1.mrna1;Target=comp117992_c0_seq1 342 385 +
Chr2	stalkie_big_nohaplotig	CDS	35008429	35008511	.	+	0	Parent=comp117992_c0_seq1.mrna1;Target=comp117992_c0_seq1 259 341 +
Chr2	stalkie_big_nohaplotig	CDS	35020786	35020828	.	+	1	Parent=comp117992_c0_seq1.mrna1;Target=comp117992_c0_seq1 342 384 +
Chr2	stalkie_big_nohaplotig	mRNA	35020786	35030666	.	+	.	ID=FBgn0013765.1.mrna1;geneID=FBgn0013765.1.path1;Name=FBgn0013765.1;Dir=sensecoverage=97.5;identity=99.8;matches=2537;mismatches=4;indels=1;unknowns=0;locus=RLOC_00016290
Chr2	stalkie_big_nohaplotig	exon	35020786	35020829	100	+	.	Parent=FBgn0013765.1.mrna1;Target=FBgn0013765.1 66 109 +
Chr2	stalkie_big_nohaplotig	exon	35022770	35022990	100	+	.	Parent=FBgn0013765.1.mrna1;Target=FBgn0013765.1 110 330 +
Chr2	stalkie_big_nohaplotig	exon	35023048	35023179	100	+	.	Parent=FBgn0013765.1.mrna1;Target=FBgn0013765.1 331 462 +
Chr2	stalkie_big_nohaplotig	exon	35024261	35024338	96	+	.	Parent=FBgn0013765.1.mrna1;Target=FBgn0013765.1 463 540 +
Chr2	stalkie_big_nohaplotig	exon	35024408	35024611	99	+	.	Parent=FBgn0013765.1.mrna1;Target=FBgn0013765.1 541 744 +
Chr2	stalkie_big_nohaplotig	exon	35028678	35028902	100	+	.	Parent=FBgn0013765.1.mrna1;Target=FBgn0013765.1 745 969 +
Chr2	stalkie_big_nohaplotig	exon	35028962	35029150	100	+	.	Parent=FBgn0013765.1.mrna1;Target=FBgn0013765.1 970 1158 +
Chr2	stalkie_big_nohaplotig	exon	35029219	35030666	99	+	.	Parent=FBgn0013765.1.mrna1;Target=FBgn0013765.1 1159 2607 +
Chr2	stalkie_big_nohaplotig	CDS	35020787	35020829	.	+	0	Parent=FBgn0013765.1.mrna1;Target=FBgn0013765.1 67 109 +
Chr2	stalkie_big_nohaplotig	CDS	35022770	35022990	.	+	2	Parent=FBgn0013765.1.mrna1;Target=FBgn0013765.1 110 330 +
Chr2	stalkie_big_nohaplotig	CDS	35023048	35023179	.	+	0	Parent=FBgn0013765.1.mrna1;Target=FBgn0013765.1 331 462 +
Chr2	stalkie_big_nohaplotig	CDS	35024261	35024338	.	+	0	Parent=FBgn0013765.1.mrna1;Target=FBgn0013765.1 463 540 +
Chr2	stalkie_big_nohaplotig	CDS	35024408	35024611	.	+	0	Parent=FBgn0013765.1.mrna1;Target=FBgn0013765.1 541 744 +
Chr2	stalkie_big_nohaplotig	CDS	35028678	35028902	.	+	0	Parent=FBgn0013765.1.mrna1;Target=FBgn0013765.1 745 969 +
Chr2	stalkie_big_nohaplotig	CDS	35028962	35029150	.	+	0	Parent=FBgn0013765.1.mrna1;Target=FBgn0013765.1 970 1158 +
Chr2	stalkie_big_nohaplotig	CDS	35029219	35030666	.	+	0	Parent=FBgn0013765.1.mrna1;Target=FBgn0013765.1 1159 2607 +
Chr2	gffcl	locus	35019003	35019446	.	+	.	ID=RLOC_00016291;geneIDs=FBgn0004429.1.path1;transcripts=FBgn0004429.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35019003	35019446	.	+	.	ID=FBgn0004429.1.mrna1;geneID=FBgn0004429.1.path1;Name=FBgn0004429.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=443;mismatches=1;indels=0;unknowns=0;Target=FBgn0004429.1 444 1 .;locus=RLOC_00016291
Chr2	stalkie_big_nohaplotig	exon	35019003	35019446	99	+	.	Parent=FBgn0004429.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35019003	35019446	.	+	0	Parent=FBgn0004429.1.mrna1
Chr2	gffcl	locus	35035441	35040619	.	-	.	ID=RLOC_00016292;geneIDs=comp152491_c0_seq1.path1;transcripts=comp152491_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35035441	35040619	.	-	.	ID=comp152491_c0_seq1.mrna1;geneID=comp152491_c0_seq1.path1;Name=comp152491_c0_seq1;Dir=sensecoverage=98.9;identity=100.0;matches=1209;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016292
Chr2	stalkie_big_nohaplotig	exon	35035441	35035945	100	-	.	Parent=comp152491_c0_seq1.mrna1;Target=comp152491_c0_seq1 718 1222 +
Chr2	stalkie_big_nohaplotig	exon	35036144	35036588	100	-	.	Parent=comp152491_c0_seq1.mrna1;Target=comp152491_c0_seq1 273 717 +
Chr2	stalkie_big_nohaplotig	exon	35040222	35040240	100	-	.	Parent=comp152491_c0_seq1.mrna1;Target=comp152491_c0_seq1 254 272 +
Chr2	stalkie_big_nohaplotig	exon	35040380	35040619	100	-	.	Parent=comp152491_c0_seq1.mrna1;Target=comp152491_c0_seq1 14 253 +
Chr2	stalkie_big_nohaplotig	CDS	35035441	35035945	.	-	1	Parent=comp152491_c0_seq1.mrna1;Target=comp152491_c0_seq1 718 1222 +
Chr2	stalkie_big_nohaplotig	CDS	35036144	35036424	.	-	0	Parent=comp152491_c0_seq1.mrna1;Target=comp152491_c0_seq1 437 717 +
Chr2	gffcl	locus	35037963	35039153	.	+	.	ID=RLOC_00016293;geneIDs=FBgn0024887.1.path1;transcripts=FBgn0024887.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35037963	35039153	.	+	.	ID=FBgn0024887.1.mrna1;geneID=FBgn0024887.1.path1;Name=FBgn0024887.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1188;mismatches=3;indels=0;unknowns=0;Target=FBgn0024887.1 1191 1 .;locus=RLOC_00016293
Chr2	stalkie_big_nohaplotig	exon	35037963	35039153	99	+	.	Parent=FBgn0024887.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35037963	35039153	.	+	0	Parent=FBgn0024887.1.mrna1
Chr2	gffcl	locus	35048810	35049046	.	+	.	ID=RLOC_00016295;geneIDs=comp117511_c0_seq1.path1;transcripts=comp117511_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35048810	35049046	.	+	.	ID=comp117511_c0_seq1.mrna1;geneID=comp117511_c0_seq1.path1;Name=comp117511_c0_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=237;mismatches=0;indels=0;unknowns=0;Target=comp117511_c0_seq1 238 2 .;CDS_Target=comp117511_c0_seq1 187 128 .;locus=RLOC_00016295
Chr2	stalkie_big_nohaplotig	exon	35048810	35049046	100	+	.	Parent=comp117511_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35048936	35048995	.	+	0	Parent=comp117511_c0_seq1.mrna1
Chr2	gffcl	locus	35052587	35052907	.	+	.	ID=RLOC_00016296;geneIDs=comp149283_c0_seq1.path1;transcripts=comp149283_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35052587	35052907	.	+	.	ID=comp149283_c0_seq1.mrna1;geneID=comp149283_c0_seq1.path1;Name=comp149283_c0_seq1;Dir=indeterminatecoverage=93.9;identity=100.0;matches=321;mismatches=0;indels=0;unknowns=0;Target=comp149283_c0_seq1 342 22 .;CDS_Target=comp149283_c0_seq1 231 145 .;locus=RLOC_00016296
Chr2	stalkie_big_nohaplotig	exon	35052587	35052907	100	+	.	Parent=comp149283_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35052710	35052796	.	+	0	Parent=comp149283_c0_seq1.mrna1
Chr2	gffcl	locus	35091398	35092542	.	+	.	ID=RLOC_00016297;geneIDs=comp160186_c0_seq1.path1;transcripts=comp160186_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35091398	35092542	.	+	.	ID=comp160186_c0_seq1.mrna1;geneID=comp160186_c0_seq1.path1;Name=comp160186_c0_seq1;Dir=antisensecoverage=99.9;identity=93.4;matches=825;mismatches=17;indels=41;unknowns=0;locus=RLOC_00016297
Chr2	stalkie_big_nohaplotig	exon	35091398	35091587	100	+	.	Parent=comp160186_c0_seq1.mrna1;Target=comp160186_c0_seq1 683 872 -
Chr2	stalkie_big_nohaplotig	exon	35091687	35091798	96	+	.	Parent=comp160186_c0_seq1.mrna1;Target=comp160186_c0_seq1 571 682 -
Chr2	stalkie_big_nohaplotig	exon	35091893	35092333	89	+	.	Parent=comp160186_c0_seq1.mrna1;Target=comp160186_c0_seq1 166 570 -
Chr2	stalkie_big_nohaplotig	exon	35092408	35092542	94	+	.	Parent=comp160186_c0_seq1.mrna1;Target=comp160186_c0_seq1 1 140 -
Chr2	stalkie_big_nohaplotig	CDS	35091399	35091587	.	+	0	Parent=comp160186_c0_seq1.mrna1;Target=comp160186_c0_seq1 683 871 .
Chr2	stalkie_big_nohaplotig	CDS	35091687	35091725	.	+	0	Parent=comp160186_c0_seq1.mrna1;Target=comp160186_c0_seq1 644 682 .
Chr2	gffcl	locus	35110163	35111747	.	+	.	ID=RLOC_00016298;geneIDs=comp135187_c0_seq1.path1;transcripts=comp135187_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35110163	35111747	.	+	.	ID=comp135187_c0_seq1.mrna1;geneID=comp135187_c0_seq1.path1;Name=comp135187_c0_seq1;Dir=sensecoverage=94.0;identity=98.7;matches=311;mismatches=1;indels=3;unknowns=0;Target=comp135187_c0_seq1 38 184 +;locus=RLOC_00016298
Chr2	stalkie_big_nohaplotig	exon	35110163	35110184	100	+	.	Parent=comp135187_c0_seq1.mrna1;Target=comp135187_c0_seq1 3 24 +
Chr2	stalkie_big_nohaplotig	exon	35111456	35111747	98	+	.	Parent=comp135187_c0_seq1.mrna1;Target=comp135187_c0_seq1 25 315 +
Chr2	stalkie_big_nohaplotig	CDS	35111469	35111614	.	+	0	Parent=comp135187_c0_seq1.mrna1
Chr2	gffcl	locus	35121849	35297135	.	+	.	ID=RLOC_00016299;geneIDs=FBgn0003435.1.path1,comp156076_c1_seq1.path1;transcripts=comp156076_c1_seq1.mrna1,FBgn0003435.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35121849	35297135	.	+	.	ID=comp156076_c1_seq1.mrna1;geneID=comp156076_c1_seq1.path1;Name=comp156076_c1_seq1;Dir=sensecoverage=91.6;identity=99.1;matches=3825;mismatches=21;indels=15;unknowns=0;locus=RLOC_00016299
Chr2	stalkie_big_nohaplotig	exon	35121849	35121853	45	+	.	Parent=comp156076_c1_seq1.mrna1;Target=comp156076_c1_seq1 356 366 +
Chr2	stalkie_big_nohaplotig	exon	35122179	35122189	90	+	.	Parent=comp156076_c1_seq1.mrna1;Target=comp156076_c1_seq1 367 377 +
Chr2	stalkie_big_nohaplotig	exon	35123836	35123883	56	+	.	Parent=comp156076_c1_seq1.mrna1;Target=comp156076_c1_seq1 378 417 +
Chr2	stalkie_big_nohaplotig	exon	35125342	35126129	100	+	.	Parent=comp156076_c1_seq1.mrna1;Target=comp156076_c1_seq1 418 1205 +
Chr2	stalkie_big_nohaplotig	exon	35127834	35128334	100	+	.	Parent=comp156076_c1_seq1.mrna1;Target=comp156076_c1_seq1 1206 1706 +
Chr2	stalkie_big_nohaplotig	exon	35161399	35161536	100	+	.	Parent=comp156076_c1_seq1.mrna1;Target=comp156076_c1_seq1 1707 1844 +
Chr2	stalkie_big_nohaplotig	exon	35189345	35189527	98	+	.	Parent=comp156076_c1_seq1.mrna1;Target=comp156076_c1_seq1 1845 2027 +
Chr2	stalkie_big_nohaplotig	exon	35189678	35189741	100	+	.	Parent=comp156076_c1_seq1.mrna1;Target=comp156076_c1_seq1 2028 2091 +
Chr2	stalkie_big_nohaplotig	exon	35201103	35201870	100	+	.	Parent=comp156076_c1_seq1.mrna1;Target=comp156076_c1_seq1 2092 2859 +
Chr2	stalkie_big_nohaplotig	exon	35224505	35224576	100	+	.	Parent=comp156076_c1_seq1.mrna1;Target=comp156076_c1_seq1 2860 2931 +
Chr2	stalkie_big_nohaplotig	exon	35273563	35273741	99	+	.	Parent=comp156076_c1_seq1.mrna1;Target=comp156076_c1_seq1 2932 3110 +
Chr2	stalkie_big_nohaplotig	exon	35274121	35274213	100	+	.	Parent=comp156076_c1_seq1.mrna1;Target=comp156076_c1_seq1 3111 3203 +
Chr2	stalkie_big_nohaplotig	exon	35293184	35293459	100	+	.	Parent=comp156076_c1_seq1.mrna1;Target=comp156076_c1_seq1 3204 3479 +
Chr2	stalkie_big_nohaplotig	exon	35293995	35294199	100	+	.	Parent=comp156076_c1_seq1.mrna1;Target=comp156076_c1_seq1 3480 3684 +
Chr2	stalkie_big_nohaplotig	exon	35296613	35297135	99	+	.	Parent=comp156076_c1_seq1.mrna1;Target=comp156076_c1_seq1 3685 4208 +
Chr2	stalkie_big_nohaplotig	CDS	35273673	35273741	.	+	0	Parent=comp156076_c1_seq1.mrna1;Target=comp156076_c1_seq1 3042 3110 +
Chr2	stalkie_big_nohaplotig	CDS	35274121	35274213	.	+	0	Parent=comp156076_c1_seq1.mrna1;Target=comp156076_c1_seq1 3111 3203 +
Chr2	stalkie_big_nohaplotig	CDS	35293184	35293459	.	+	0	Parent=comp156076_c1_seq1.mrna1;Target=comp156076_c1_seq1 3204 3479 +
Chr2	stalkie_big_nohaplotig	CDS	35293995	35294199	.	+	0	Parent=comp156076_c1_seq1.mrna1;Target=comp156076_c1_seq1 3480 3684 +
Chr2	stalkie_big_nohaplotig	CDS	35296613	35296752	.	+	2	Parent=comp156076_c1_seq1.mrna1;Target=comp156076_c1_seq1 3685 3824 +
Chr2	stalkie_big_nohaplotig	mRNA	35128134	35296749	.	+	.	ID=FBgn0003435.1.mrna1;geneID=FBgn0003435.1.path1;Name=FBgn0003435.1;Dir=sensecoverage=100.0;identity=99.8;matches=1581;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016299
Chr2	stalkie_big_nohaplotig	exon	35128134	35128334	100	+	.	Parent=FBgn0003435.1.mrna1;Target=FBgn0003435.1 1 201 +
Chr2	stalkie_big_nohaplotig	exon	35161399	35161536	100	+	.	Parent=FBgn0003435.1.mrna1;Target=FBgn0003435.1 202 339 +
Chr2	stalkie_big_nohaplotig	exon	35189345	35189527	98	+	.	Parent=FBgn0003435.1.mrna1;Target=FBgn0003435.1 340 522 +
Chr2	stalkie_big_nohaplotig	exon	35189678	35189741	100	+	.	Parent=FBgn0003435.1.mrna1;Target=FBgn0003435.1 523 586 +
Chr2	stalkie_big_nohaplotig	exon	35205099	35205170	100	+	.	Parent=FBgn0003435.1.mrna1;Target=FBgn0003435.1 587 658 +
Chr2	stalkie_big_nohaplotig	exon	35273527	35273741	99	+	.	Parent=FBgn0003435.1.mrna1;Target=FBgn0003435.1 659 873 +
Chr2	stalkie_big_nohaplotig	exon	35274121	35274213	100	+	.	Parent=FBgn0003435.1.mrna1;Target=FBgn0003435.1 874 966 +
Chr2	stalkie_big_nohaplotig	exon	35293184	35293459	100	+	.	Parent=FBgn0003435.1.mrna1;Target=FBgn0003435.1 967 1242 +
Chr2	stalkie_big_nohaplotig	exon	35293995	35294199	100	+	.	Parent=FBgn0003435.1.mrna1;Target=FBgn0003435.1 1243 1447 +
Chr2	stalkie_big_nohaplotig	exon	35296613	35296749	100	+	.	Parent=FBgn0003435.1.mrna1;Target=FBgn0003435.1 1448 1584 +
Chr2	stalkie_big_nohaplotig	CDS	35128134	35128334	.	+	0	Parent=FBgn0003435.1.mrna1;Target=FBgn0003435.1 1 201 +
Chr2	stalkie_big_nohaplotig	CDS	35161399	35161536	.	+	0	Parent=FBgn0003435.1.mrna1;Target=FBgn0003435.1 202 339 +
Chr2	stalkie_big_nohaplotig	CDS	35189345	35189527	.	+	0	Parent=FBgn0003435.1.mrna1;Target=FBgn0003435.1 340 522 +
Chr2	stalkie_big_nohaplotig	CDS	35189678	35189741	.	+	0	Parent=FBgn0003435.1.mrna1;Target=FBgn0003435.1 523 586 +
Chr2	stalkie_big_nohaplotig	CDS	35205099	35205170	.	+	2	Parent=FBgn0003435.1.mrna1;Target=FBgn0003435.1 587 658 +
Chr2	stalkie_big_nohaplotig	CDS	35273527	35273741	.	+	2	Parent=FBgn0003435.1.mrna1;Target=FBgn0003435.1 659 873 +
Chr2	stalkie_big_nohaplotig	CDS	35274121	35274213	.	+	0	Parent=FBgn0003435.1.mrna1;Target=FBgn0003435.1 874 966 +
Chr2	stalkie_big_nohaplotig	CDS	35293184	35293459	.	+	0	Parent=FBgn0003435.1.mrna1;Target=FBgn0003435.1 967 1242 +
Chr2	stalkie_big_nohaplotig	CDS	35293995	35294199	.	+	0	Parent=FBgn0003435.1.mrna1;Target=FBgn0003435.1 1243 1447 +
Chr2	stalkie_big_nohaplotig	CDS	35296613	35296749	.	+	2	Parent=FBgn0003435.1.mrna1;Target=FBgn0003435.1 1448 1584 +
Chr2	gffcl	locus	35126978	35127251	.	+	.	ID=RLOC_00016300;geneIDs=comp141767_c0_seq1.path1;transcripts=comp141767_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35126978	35127251	.	+	.	ID=comp141767_c0_seq1.mrna1;geneID=comp141767_c0_seq1.path1;Name=comp141767_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=273;mismatches=1;indels=6;unknowns=0;Target=comp141767_c0_seq1 280 1 .;CDS_Target=comp141767_c0_seq1 72 1 .;locus=RLOC_00016300
Chr2	stalkie_big_nohaplotig	exon	35126978	35127251	97	+	.	Parent=comp141767_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35126978	35127049	.	+	0	Parent=comp141767_c0_seq1.mrna1
Chr2	gffcl	locus	35144917	35145548	.	+	.	ID=RLOC_00016301;geneIDs=comp155841_c1_seq1.path1;transcripts=comp155841_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35144917	35145548	.	+	.	ID=comp155841_c1_seq1.mrna1;geneID=comp155841_c1_seq1.path1;Name=comp155841_c1_seq1;Dir=indeterminatecoverage=98.1;identity=94.9;matches=627;mismatches=5;indels=29;unknowns=0;Target=comp155841_c1_seq1 661 1 .;CDS_Target=comp155841_c1_seq1 203 96 .;locus=RLOC_00016301
Chr2	stalkie_big_nohaplotig	exon	35144917	35145548	94	+	.	Parent=comp155841_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35145012	35145119	.	+	0	Parent=comp155841_c1_seq1.mrna1
Chr2	gffcl	locus	35297785	35298407	.	-	.	ID=RLOC_00016302;geneIDs=comp147613_c0_seq1.path1;transcripts=comp147613_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35297785	35298407	.	-	.	ID=comp147613_c0_seq1.mrna1;geneID=comp147613_c0_seq1.path1;Name=comp147613_c0_seq1;Dir=indeterminatecoverage=98.7;identity=100.0;matches=623;mismatches=0;indels=0;unknowns=0;Target=comp147613_c0_seq1 623 1 .;CDS_Target=comp147613_c0_seq1 468 322 .;locus=RLOC_00016302
Chr2	stalkie_big_nohaplotig	exon	35297785	35298407	100	-	.	Parent=comp147613_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35297940	35298086	.	-	0	Parent=comp147613_c0_seq1.mrna1
Chr2	gffcl	locus	35303134	35303972	.	+	.	ID=RLOC_00016303;geneIDs=comp143116_c0_seq1.path1;transcripts=comp143116_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35303134	35303972	.	+	.	ID=comp143116_c0_seq1.mrna1;geneID=comp143116_c0_seq1.path1;Name=comp143116_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=835;mismatches=4;indels=0;unknowns=0;Target=comp143116_c0_seq1 839 1 .;CDS_Target=comp143116_c0_seq1 390 271 .;locus=RLOC_00016303
Chr2	stalkie_big_nohaplotig	exon	35303134	35303972	99	+	.	Parent=comp143116_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35303404	35303523	.	+	0	Parent=comp143116_c0_seq1.mrna1
Chr2	gffcl	locus	35304055	35304369	.	+	.	ID=RLOC_00016304;geneIDs=comp143250_c0_seq1.path1;transcripts=comp143250_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35304055	35304369	.	+	.	ID=comp143250_c0_seq1.mrna1;geneID=comp143250_c0_seq1.path1;Name=comp143250_c0_seq1;Dir=indeterminatecoverage=94.6;identity=100.0;matches=315;mismatches=0;indels=0;unknowns=0;Target=comp143250_c0_seq1 333 19 .;CDS_Target=comp143250_c0_seq1 153 19 .;locus=RLOC_00016304
Chr2	stalkie_big_nohaplotig	exon	35304055	35304369	100	+	.	Parent=comp143250_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35304055	35304189	.	+	0	Parent=comp143250_c0_seq1.mrna1
Chr2	gffcl	locus	35304822	35305335	.	+	.	ID=RLOC_00016305;geneIDs=comp724627_c0_seq1.path1;transcripts=comp724627_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35304822	35305335	.	+	.	ID=comp724627_c0_seq1.mrna1;geneID=comp724627_c0_seq1.path1;Name=comp724627_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=514;mismatches=0;indels=0;unknowns=0;Target=comp724627_c0_seq1 514 1 .;CDS_Target=comp724627_c0_seq1 185 75 .;locus=RLOC_00016305
Chr2	stalkie_big_nohaplotig	exon	35304822	35305335	100	+	.	Parent=comp724627_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35304896	35305006	.	+	0	Parent=comp724627_c0_seq1.mrna1
Chr2	gffcl	locus	35305806	35308248	.	.	.	ID=RLOC_00016306;geneIDs=comp150109_c0_seq1.path1,comp159493_c0_seq1.path1;transcripts=comp150109_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35306821	35308248	.	+	.	ID=comp150109_c0_seq1.mrna1;geneID=comp150109_c0_seq1.path1;Name=comp150109_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1423;mismatches=5;indels=0;unknowns=0;Target=comp150109_c0_seq1 1428 1 .;CDS_Target=comp150109_c0_seq1 895 722 .;locus=RLOC_00016306
Chr2	stalkie_big_nohaplotig	exon	35306821	35308248	99	+	.	Parent=comp150109_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35307542	35307715	.	+	0	Parent=comp150109_c0_seq1.mrna1
Chr2	gffcl	locus	35316076	35320911	.	+	.	ID=RLOC_00016307;geneIDs=comp159661_c0_seq1.path1,comp162355_c0_seq1.path1;transcripts=comp162355_c0_seq1.mrna1,comp159661_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35316076	35319615	.	+	.	ID=comp162355_c0_seq1.mrna1;geneID=comp162355_c0_seq1.path1;Name=comp162355_c0_seq1;Dir=indeterminatecoverage=79.5;identity=98.1;matches=1974;mismatches=5;indels=34;unknowns=0;Target=comp162355_c0_seq1 1324 1148 .;locus=RLOC_00016307
Chr2	stalkie_big_nohaplotig	exon	35316076	35316618	98	+	.	Parent=comp162355_c0_seq1.mrna1;Target=comp162355_c0_seq1 547 11 .
Chr2	stalkie_big_nohaplotig	exon	35316707	35318153	98	+	.	Parent=comp162355_c0_seq1.mrna1;Target=comp162355_c0_seq1 1969 548 .
Chr2	stalkie_big_nohaplotig	exon	35319593	35319615	82	+	.	Parent=comp162355_c0_seq1.mrna1;Target=comp162355_c0_seq1 1989 1970 .
Chr2	stalkie_big_nohaplotig	CDS	35317307	35317483	.	+	0	Parent=comp162355_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35319527	35320911	.	+	.	ID=comp159661_c0_seq1.mrna1;geneID=comp159661_c0_seq1.path1;Name=comp159661_c0_seq1;Dir=indeterminatecoverage=98.4;identity=92.6;matches=1286;mismatches=99;indels=4;unknowns=0;Target=comp159661_c0_seq1 1411 23 .;CDS_Target=comp159661_c0_seq1 546 388 .;locus=RLOC_00016307
Chr2	stalkie_big_nohaplotig	exon	35319527	35320911	92	+	.	Parent=comp159661_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35319888	35320046	.	+	0	Parent=comp159661_c0_seq1.mrna1
Chr2	gffcl	locus	35321031	35322067	.	-	.	ID=RLOC_00016308;geneIDs=comp147379_c0_seq1.path1;transcripts=comp147379_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35321031	35322067	.	-	.	ID=comp147379_c0_seq1.mrna1;geneID=comp147379_c0_seq1.path1;Name=comp147379_c0_seq1;Dir=indeterminatecoverage=90.1;identity=100.0;matches=1037;mismatches=0;indels=0;unknowns=0;Target=comp147379_c0_seq1 1145 109 .;CDS_Target=comp147379_c0_seq1 841 695 .;locus=RLOC_00016308
Chr2	stalkie_big_nohaplotig	exon	35321031	35322067	100	-	.	Parent=comp147379_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35321335	35321481	.	-	0	Parent=comp147379_c0_seq1.mrna1
Chr2	gffcl	locus	35370144	35376505	.	-	.	ID=RLOC_00016309;geneIDs=FBgn0033714.1.path1;transcripts=FBgn0033714.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35370144	35376505	.	-	.	ID=FBgn0033714.1.mrna1;geneID=FBgn0033714.1.path1;Name=FBgn0033714.1;Dir=sensecoverage=99.7;identity=99.9;matches=5244;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016309
Chr2	stalkie_big_nohaplotig	exon	35370144	35370278	100	-	.	Parent=FBgn0033714.1.mrna1;Target=FBgn0033714.1 5114 5248 +
Chr2	stalkie_big_nohaplotig	exon	35370343	35371397	99	-	.	Parent=FBgn0033714.1.mrna1;Target=FBgn0033714.1 4059 5113 +
Chr2	stalkie_big_nohaplotig	exon	35371461	35372715	99	-	.	Parent=FBgn0033714.1.mrna1;Target=FBgn0033714.1 2804 4058 +
Chr2	stalkie_big_nohaplotig	exon	35373412	35373638	100	-	.	Parent=FBgn0033714.1.mrna1;Target=FBgn0033714.1 2577 2803 +
Chr2	stalkie_big_nohaplotig	exon	35373701	35373909	100	-	.	Parent=FBgn0033714.1.mrna1;Target=FBgn0033714.1 2368 2576 +
Chr2	stalkie_big_nohaplotig	exon	35373970	35374950	99	-	.	Parent=FBgn0033714.1.mrna1;Target=FBgn0033714.1 1387 2367 +
Chr2	stalkie_big_nohaplotig	exon	35375008	35376068	100	-	.	Parent=FBgn0033714.1.mrna1;Target=FBgn0033714.1 326 1386 +
Chr2	stalkie_big_nohaplotig	exon	35376123	35376321	100	-	.	Parent=FBgn0033714.1.mrna1;Target=FBgn0033714.1 127 325 +
Chr2	stalkie_big_nohaplotig	exon	35376380	35376505	99	-	.	Parent=FBgn0033714.1.mrna1;Target=FBgn0033714.1 1 126 +
Chr2	stalkie_big_nohaplotig	CDS	35370145	35370278	.	-	2	Parent=FBgn0033714.1.mrna1;Target=FBgn0033714.1 5114 5247 +
Chr2	stalkie_big_nohaplotig	CDS	35370343	35371397	.	-	1	Parent=FBgn0033714.1.mrna1;Target=FBgn0033714.1 4059 5113 +
Chr2	stalkie_big_nohaplotig	CDS	35371461	35372715	.	-	2	Parent=FBgn0033714.1.mrna1;Target=FBgn0033714.1 2804 4058 +
Chr2	stalkie_big_nohaplotig	CDS	35373412	35373638	.	-	1	Parent=FBgn0033714.1.mrna1;Target=FBgn0033714.1 2577 2803 +
Chr2	stalkie_big_nohaplotig	CDS	35373701	35373909	.	-	0	Parent=FBgn0033714.1.mrna1;Target=FBgn0033714.1 2368 2576 +
Chr2	stalkie_big_nohaplotig	CDS	35373970	35374950	.	-	0	Parent=FBgn0033714.1.mrna1;Target=FBgn0033714.1 1387 2367 +
Chr2	stalkie_big_nohaplotig	CDS	35375008	35376068	.	-	2	Parent=FBgn0033714.1.mrna1;Target=FBgn0033714.1 326 1386 +
Chr2	stalkie_big_nohaplotig	CDS	35376123	35376321	.	-	0	Parent=FBgn0033714.1.mrna1;Target=FBgn0033714.1 127 325 +
Chr2	stalkie_big_nohaplotig	CDS	35376380	35376505	.	-	0	Parent=FBgn0033714.1.mrna1;Target=FBgn0033714.1 1 126 +
Chr2	gffcl	locus	35379273	35381947	.	+	.	ID=RLOC_00016310;geneIDs=FBgn0033713.1.path1;transcripts=FBgn0033713.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35379273	35381947	.	+	.	ID=FBgn0033713.1.mrna1;geneID=FBgn0033713.1.path1;Name=FBgn0033713.1;Dir=sensecoverage=100.0;identity=100.0;matches=2625;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016310
Chr2	stalkie_big_nohaplotig	exon	35379273	35380617	100	+	.	Parent=FBgn0033713.1.mrna1;Target=FBgn0033713.1 1 1345 +
Chr2	stalkie_big_nohaplotig	exon	35380668	35381947	100	+	.	Parent=FBgn0033713.1.mrna1;Target=FBgn0033713.1 1346 2625 +
Chr2	stalkie_big_nohaplotig	CDS	35379273	35380617	.	+	0	Parent=FBgn0033713.1.mrna1;Target=FBgn0033713.1 1 1345 +
Chr2	stalkie_big_nohaplotig	CDS	35380668	35381947	.	+	2	Parent=FBgn0033713.1.mrna1;Target=FBgn0033713.1 1346 2625 +
Chr2	gffcl	locus	35383796	35384224	.	+	.	ID=RLOC_00016311;geneIDs=comp108225_c0_seq1.path1;transcripts=comp108225_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35383796	35384224	.	+	.	ID=comp108225_c0_seq1.mrna1;geneID=comp108225_c0_seq1.path1;Name=comp108225_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.1;matches=424;mismatches=1;indels=16;unknowns=0;Target=comp108225_c0_seq1 437 1 .;CDS_Target=comp108225_c0_seq1 398 270 .;locus=RLOC_00016311
Chr2	stalkie_big_nohaplotig	exon	35383796	35384224	96	+	.	Parent=comp108225_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35384053	35384185	.	+	0	Parent=comp108225_c0_seq1.mrna1
Chr2	gffcl	locus	35385528	35386417	.	+	.	ID=RLOC_00016312;geneIDs=FBgn0033712.1.path1;transcripts=FBgn0033712.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35385528	35386417	.	+	.	ID=FBgn0033712.1.mrna1;geneID=FBgn0033712.1.path1;Name=FBgn0033712.1;Dir=sensecoverage=100.0;identity=99.5;matches=728;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016312
Chr2	stalkie_big_nohaplotig	exon	35385528	35385865	100	+	.	Parent=FBgn0033712.1.mrna1;Target=FBgn0033712.1 1 338 +
Chr2	stalkie_big_nohaplotig	exon	35385960	35386034	100	+	.	Parent=FBgn0033712.1.mrna1;Target=FBgn0033712.1 339 413 +
Chr2	stalkie_big_nohaplotig	exon	35386099	35386417	98	+	.	Parent=FBgn0033712.1.mrna1;Target=FBgn0033712.1 414 732 +
Chr2	stalkie_big_nohaplotig	CDS	35385528	35385865	.	+	0	Parent=FBgn0033712.1.mrna1;Target=FBgn0033712.1 1 338 +
Chr2	stalkie_big_nohaplotig	CDS	35385960	35386034	.	+	1	Parent=FBgn0033712.1.mrna1;Target=FBgn0033712.1 339 413 +
Chr2	stalkie_big_nohaplotig	CDS	35386099	35386417	.	+	1	Parent=FBgn0033712.1.mrna1;Target=FBgn0033712.1 414 732 +
Chr2	gffcl	locus	35389213	35393177	.	-	.	ID=RLOC_00016313;geneIDs=FBgn0050046.1.path1;transcripts=FBgn0050046.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35389213	35393177	.	-	.	ID=FBgn0050046.1.mrna1;geneID=FBgn0050046.1.path1;Name=FBgn0050046.1;Dir=sensecoverage=100.0;identity=99.8;matches=2201;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016313
Chr2	stalkie_big_nohaplotig	exon	35389213	35389821	100	-	.	Parent=FBgn0050046.1.mrna1;Target=FBgn0050046.1 1597 2205 +
Chr2	stalkie_big_nohaplotig	exon	35389878	35390224	100	-	.	Parent=FBgn0050046.1.mrna1;Target=FBgn0050046.1 1250 1596 +
Chr2	stalkie_big_nohaplotig	exon	35390455	35390626	99	-	.	Parent=FBgn0050046.1.mrna1;Target=FBgn0050046.1 1078 1249 +
Chr2	stalkie_big_nohaplotig	exon	35390687	35390941	100	-	.	Parent=FBgn0050046.1.mrna1;Target=FBgn0050046.1 823 1077 +
Chr2	stalkie_big_nohaplotig	exon	35391019	35391231	100	-	.	Parent=FBgn0050046.1.mrna1;Target=FBgn0050046.1 610 822 +
Chr2	stalkie_big_nohaplotig	exon	35391293	35391684	99	-	.	Parent=FBgn0050046.1.mrna1;Target=FBgn0050046.1 218 609 +
Chr2	stalkie_big_nohaplotig	exon	35392961	35393177	100	-	.	Parent=FBgn0050046.1.mrna1;Target=FBgn0050046.1 1 217 +
Chr2	stalkie_big_nohaplotig	CDS	35389213	35389821	.	-	0	Parent=FBgn0050046.1.mrna1;Target=FBgn0050046.1 1597 2205 +
Chr2	stalkie_big_nohaplotig	CDS	35389878	35390224	.	-	2	Parent=FBgn0050046.1.mrna1;Target=FBgn0050046.1 1250 1596 +
Chr2	stalkie_big_nohaplotig	CDS	35390455	35390626	.	-	0	Parent=FBgn0050046.1.mrna1;Target=FBgn0050046.1 1078 1249 +
Chr2	stalkie_big_nohaplotig	CDS	35390687	35390941	.	-	0	Parent=FBgn0050046.1.mrna1;Target=FBgn0050046.1 823 1077 +
Chr2	stalkie_big_nohaplotig	CDS	35391019	35391231	.	-	0	Parent=FBgn0050046.1.mrna1;Target=FBgn0050046.1 610 822 +
Chr2	stalkie_big_nohaplotig	CDS	35391293	35391684	.	-	2	Parent=FBgn0050046.1.mrna1;Target=FBgn0050046.1 218 609 +
Chr2	stalkie_big_nohaplotig	CDS	35392961	35393177	.	-	0	Parent=FBgn0050046.1.mrna1;Target=FBgn0050046.1 1 217 +
Chr2	gffcl	locus	35396089	35398705	.	-	.	ID=RLOC_00016314;geneIDs=FBgn0050203.path1;transcripts=FBgn0050203.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35396089	35398705	.	-	.	ID=FBgn0050203.mrna1;geneID=FBgn0050203.path1;Name=FBgn0050203;Dir=sensecoverage=100.0;identity=99.6;matches=1261;mismatches=5;indels=0;unknowns=0;locus=RLOC_00016314
Chr2	stalkie_big_nohaplotig	exon	35396089	35396946	100	-	.	Parent=FBgn0050203.mrna1;Target=FBgn0050203 409 1266 +
Chr2	stalkie_big_nohaplotig	exon	35397604	35397938	98	-	.	Parent=FBgn0050203.mrna1;Target=FBgn0050203 74 408 +
Chr2	stalkie_big_nohaplotig	exon	35398633	35398705	100	-	.	Parent=FBgn0050203.mrna1;Target=FBgn0050203 1 73 +
Chr2	stalkie_big_nohaplotig	CDS	35396089	35396946	.	-	0	Parent=FBgn0050203.mrna1;Target=FBgn0050203 409 1266 +
Chr2	stalkie_big_nohaplotig	CDS	35397604	35397938	.	-	2	Parent=FBgn0050203.mrna1;Target=FBgn0050203 74 408 +
Chr2	stalkie_big_nohaplotig	CDS	35398633	35398705	.	-	0	Parent=FBgn0050203.mrna1;Target=FBgn0050203 1 73 +
Chr2	gffcl	locus	35403415	35412017	.	-	.	ID=RLOC_00016315;geneIDs=FBgn0033710.1.path1;transcripts=FBgn0033710.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35403415	35412017	.	-	.	ID=FBgn0033710.1.mrna1;geneID=FBgn0033710.1.path1;Name=FBgn0033710.1;Dir=sensecoverage=100.0;identity=99.6;matches=2816;mismatches=10;indels=0;unknowns=0;locus=RLOC_00016315
Chr2	stalkie_big_nohaplotig	exon	35403415	35404515	99	-	.	Parent=FBgn0033710.1.mrna1;Target=FBgn0033710.1 1726 2826 +
Chr2	stalkie_big_nohaplotig	exon	35404580	35404947	100	-	.	Parent=FBgn0033710.1.mrna1;Target=FBgn0033710.1 1358 1725 +
Chr2	stalkie_big_nohaplotig	exon	35405013	35405184	100	-	.	Parent=FBgn0033710.1.mrna1;Target=FBgn0033710.1 1186 1357 +
Chr2	stalkie_big_nohaplotig	exon	35405571	35405825	99	-	.	Parent=FBgn0033710.1.mrna1;Target=FBgn0033710.1 931 1185 +
Chr2	stalkie_big_nohaplotig	exon	35405880	35406086	100	-	.	Parent=FBgn0033710.1.mrna1;Target=FBgn0033710.1 724 930 +
Chr2	stalkie_big_nohaplotig	exon	35406148	35406533	98	-	.	Parent=FBgn0033710.1.mrna1;Target=FBgn0033710.1 338 723 +
Chr2	stalkie_big_nohaplotig	exon	35406603	35406809	100	-	.	Parent=FBgn0033710.1.mrna1;Target=FBgn0033710.1 131 337 +
Chr2	stalkie_big_nohaplotig	exon	35411888	35412017	99	-	.	Parent=FBgn0033710.1.mrna1;Target=FBgn0033710.1 1 130 +
Chr2	stalkie_big_nohaplotig	CDS	35403415	35404515	.	-	0	Parent=FBgn0033710.1.mrna1;Target=FBgn0033710.1 1726 2826 +
Chr2	stalkie_big_nohaplotig	CDS	35404580	35404947	.	-	2	Parent=FBgn0033710.1.mrna1;Target=FBgn0033710.1 1358 1725 +
Chr2	stalkie_big_nohaplotig	CDS	35405013	35405184	.	-	0	Parent=FBgn0033710.1.mrna1;Target=FBgn0033710.1 1186 1357 +
Chr2	stalkie_big_nohaplotig	CDS	35405571	35405825	.	-	0	Parent=FBgn0033710.1.mrna1;Target=FBgn0033710.1 931 1185 +
Chr2	stalkie_big_nohaplotig	CDS	35405880	35406086	.	-	0	Parent=FBgn0033710.1.mrna1;Target=FBgn0033710.1 724 930 +
Chr2	stalkie_big_nohaplotig	CDS	35406148	35406533	.	-	2	Parent=FBgn0033710.1.mrna1;Target=FBgn0033710.1 338 723 +
Chr2	stalkie_big_nohaplotig	CDS	35406603	35406809	.	-	2	Parent=FBgn0033710.1.mrna1;Target=FBgn0033710.1 131 337 +
Chr2	stalkie_big_nohaplotig	CDS	35411888	35412017	.	-	0	Parent=FBgn0033710.1.mrna1;Target=FBgn0033710.1 1 130 +
Chr2	gffcl	locus	35408323	35421976	.	+	.	ID=RLOC_00016316;geneIDs=ORF181.path1;transcripts=ORF181.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35408323	35421976	.	+	.	ID=ORF181.mrna1;geneID=ORF181.path1;Name=ORF181;Dir=sensecoverage=100.0;identity=99.6;matches=2618;mismatches=10;indels=0;unknowns=0;locus=RLOC_00016316
Chr2	stalkie_big_nohaplotig	exon	35408323	35408401	100	+	.	Parent=ORF181.mrna1;Target=ORF181 1 79 +
Chr2	stalkie_big_nohaplotig	exon	35414415	35414471	100	+	.	Parent=ORF181.mrna1;Target=ORF181 80 136 +
Chr2	stalkie_big_nohaplotig	exon	35414529	35414668	100	+	.	Parent=ORF181.mrna1;Target=ORF181 137 276 +
Chr2	stalkie_big_nohaplotig	exon	35414718	35414762	100	+	.	Parent=ORF181.mrna1;Target=ORF181 277 321 +
Chr2	stalkie_big_nohaplotig	exon	35414825	35415035	100	+	.	Parent=ORF181.mrna1;Target=ORF181 322 532 +
Chr2	stalkie_big_nohaplotig	exon	35416293	35416625	100	+	.	Parent=ORF181.mrna1;Target=ORF181 533 865 +
Chr2	stalkie_big_nohaplotig	exon	35416895	35417052	99	+	.	Parent=ORF181.mrna1;Target=ORF181 866 1023 +
Chr2	stalkie_big_nohaplotig	exon	35417243	35417344	100	+	.	Parent=ORF181.mrna1;Target=ORF181 1024 1125 +
Chr2	stalkie_big_nohaplotig	exon	35417403	35417564	98	+	.	Parent=ORF181.mrna1;Target=ORF181 1126 1287 +
Chr2	stalkie_big_nohaplotig	exon	35418734	35418861	100	+	.	Parent=ORF181.mrna1;Target=ORF181 1288 1415 +
Chr2	stalkie_big_nohaplotig	exon	35419688	35420339	99	+	.	Parent=ORF181.mrna1;Target=ORF181 1416 2067 +
Chr2	stalkie_big_nohaplotig	exon	35420415	35420464	100	+	.	Parent=ORF181.mrna1;Target=ORF181 2068 2117 +
Chr2	stalkie_big_nohaplotig	exon	35420524	35420602	100	+	.	Parent=ORF181.mrna1;Target=ORF181 2118 2196 +
Chr2	stalkie_big_nohaplotig	exon	35421415	35421609	100	+	.	Parent=ORF181.mrna1;Target=ORF181 2197 2391 +
Chr2	stalkie_big_nohaplotig	exon	35421679	35421881	99	+	.	Parent=ORF181.mrna1;Target=ORF181 2392 2594 +
Chr2	stalkie_big_nohaplotig	exon	35421943	35421976	100	+	.	Parent=ORF181.mrna1;Target=ORF181 2595 2628 +
Chr2	stalkie_big_nohaplotig	CDS	35408323	35408401	.	+	0	Parent=ORF181.mrna1;Target=ORF181 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	35414415	35414471	.	+	2	Parent=ORF181.mrna1;Target=ORF181 80 136 +
Chr2	stalkie_big_nohaplotig	CDS	35414529	35414668	.	+	2	Parent=ORF181.mrna1;Target=ORF181 137 276 +
Chr2	stalkie_big_nohaplotig	CDS	35414718	35414762	.	+	0	Parent=ORF181.mrna1;Target=ORF181 277 321 +
Chr2	stalkie_big_nohaplotig	CDS	35414825	35415035	.	+	0	Parent=ORF181.mrna1;Target=ORF181 322 532 +
Chr2	stalkie_big_nohaplotig	CDS	35416293	35416625	.	+	2	Parent=ORF181.mrna1;Target=ORF181 533 865 +
Chr2	stalkie_big_nohaplotig	CDS	35416895	35417052	.	+	2	Parent=ORF181.mrna1;Target=ORF181 866 1023 +
Chr2	stalkie_big_nohaplotig	CDS	35417243	35417344	.	+	0	Parent=ORF181.mrna1;Target=ORF181 1024 1125 +
Chr2	stalkie_big_nohaplotig	CDS	35417403	35417564	.	+	0	Parent=ORF181.mrna1;Target=ORF181 1126 1287 +
Chr2	stalkie_big_nohaplotig	CDS	35418734	35418861	.	+	0	Parent=ORF181.mrna1;Target=ORF181 1288 1415 +
Chr2	stalkie_big_nohaplotig	CDS	35419688	35420339	.	+	1	Parent=ORF181.mrna1;Target=ORF181 1416 2067 +
Chr2	stalkie_big_nohaplotig	CDS	35420415	35420464	.	+	0	Parent=ORF181.mrna1;Target=ORF181 2068 2117 +
Chr2	stalkie_big_nohaplotig	CDS	35420524	35420602	.	+	1	Parent=ORF181.mrna1;Target=ORF181 2118 2196 +
Chr2	stalkie_big_nohaplotig	CDS	35421415	35421609	.	+	0	Parent=ORF181.mrna1;Target=ORF181 2197 2391 +
Chr2	stalkie_big_nohaplotig	CDS	35421679	35421881	.	+	0	Parent=ORF181.mrna1;Target=ORF181 2392 2594 +
Chr2	stalkie_big_nohaplotig	CDS	35421943	35421976	.	+	1	Parent=ORF181.mrna1;Target=ORF181 2595 2628 +
Chr2	gffcl	locus	35432209	35435453	.	+	.	ID=RLOC_00016317;geneIDs=FBgn0033708.1.path1;transcripts=FBgn0033708.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35432209	35435453	.	+	.	ID=FBgn0033708.1.mrna1;geneID=FBgn0033708.1.path1;Name=FBgn0033708.1;Dir=sensecoverage=100.0;identity=98.9;matches=1846;mismatches=20;indels=0;unknowns=0;locus=RLOC_00016317
Chr2	stalkie_big_nohaplotig	exon	35432209	35432319	99	+	.	Parent=FBgn0033708.1.mrna1;Target=FBgn0033708.1 1 111 +
Chr2	stalkie_big_nohaplotig	exon	35432385	35432664	100	+	.	Parent=FBgn0033708.1.mrna1;Target=FBgn0033708.1 112 391 +
Chr2	stalkie_big_nohaplotig	exon	35432721	35432940	98	+	.	Parent=FBgn0033708.1.mrna1;Target=FBgn0033708.1 392 611 +
Chr2	stalkie_big_nohaplotig	exon	35433019	35433134	100	+	.	Parent=FBgn0033708.1.mrna1;Target=FBgn0033708.1 612 727 +
Chr2	stalkie_big_nohaplotig	exon	35433198	35433352	99	+	.	Parent=FBgn0033708.1.mrna1;Target=FBgn0033708.1 728 882 +
Chr2	stalkie_big_nohaplotig	exon	35433419	35433522	100	+	.	Parent=FBgn0033708.1.mrna1;Target=FBgn0033708.1 883 986 +
Chr2	stalkie_big_nohaplotig	exon	35434439	35434905	98	+	.	Parent=FBgn0033708.1.mrna1;Target=FBgn0033708.1 987 1453 +
Chr2	stalkie_big_nohaplotig	exon	35434969	35435240	99	+	.	Parent=FBgn0033708.1.mrna1;Target=FBgn0033708.1 1454 1725 +
Chr2	stalkie_big_nohaplotig	exon	35435313	35435453	96	+	.	Parent=FBgn0033708.1.mrna1;Target=FBgn0033708.1 1726 1866 +
Chr2	stalkie_big_nohaplotig	CDS	35432209	35432319	.	+	0	Parent=FBgn0033708.1.mrna1;Target=FBgn0033708.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	35432385	35432664	.	+	0	Parent=FBgn0033708.1.mrna1;Target=FBgn0033708.1 112 391 +
Chr2	stalkie_big_nohaplotig	CDS	35432721	35432940	.	+	2	Parent=FBgn0033708.1.mrna1;Target=FBgn0033708.1 392 611 +
Chr2	stalkie_big_nohaplotig	CDS	35433019	35433134	.	+	1	Parent=FBgn0033708.1.mrna1;Target=FBgn0033708.1 612 727 +
Chr2	stalkie_big_nohaplotig	CDS	35433198	35433352	.	+	2	Parent=FBgn0033708.1.mrna1;Target=FBgn0033708.1 728 882 +
Chr2	stalkie_big_nohaplotig	CDS	35433419	35433522	.	+	0	Parent=FBgn0033708.1.mrna1;Target=FBgn0033708.1 883 986 +
Chr2	stalkie_big_nohaplotig	CDS	35434439	35434905	.	+	1	Parent=FBgn0033708.1.mrna1;Target=FBgn0033708.1 987 1453 +
Chr2	stalkie_big_nohaplotig	CDS	35434969	35435240	.	+	2	Parent=FBgn0033708.1.mrna1;Target=FBgn0033708.1 1454 1725 +
Chr2	stalkie_big_nohaplotig	CDS	35435313	35435453	.	+	0	Parent=FBgn0033708.1.mrna1;Target=FBgn0033708.1 1726 1866 +
Chr2	gffcl	locus	35439402	35467357	.	-	.	ID=RLOC_00016318;geneIDs=FBgn0261611.1.path1;transcripts=FBgn0261611.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35439402	35467357	.	-	.	ID=FBgn0261611.1.mrna1;geneID=FBgn0261611.1.path1;Name=FBgn0261611.1;Dir=sensecoverage=100.0;identity=100.0;matches=1113;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016318
Chr2	stalkie_big_nohaplotig	exon	35439402	35439597	100	-	.	Parent=FBgn0261611.1.mrna1;Target=FBgn0261611.1 918 1113 +
Chr2	stalkie_big_nohaplotig	exon	35439862	35439935	100	-	.	Parent=FBgn0261611.1.mrna1;Target=FBgn0261611.1 844 917 +
Chr2	stalkie_big_nohaplotig	exon	35440231	35440372	100	-	.	Parent=FBgn0261611.1.mrna1;Target=FBgn0261611.1 702 843 +
Chr2	stalkie_big_nohaplotig	exon	35442934	35443048	100	-	.	Parent=FBgn0261611.1.mrna1;Target=FBgn0261611.1 587 701 +
Chr2	stalkie_big_nohaplotig	exon	35443108	35443357	100	-	.	Parent=FBgn0261611.1.mrna1;Target=FBgn0261611.1 337 586 +
Chr2	stalkie_big_nohaplotig	exon	35443424	35443566	100	-	.	Parent=FBgn0261611.1.mrna1;Target=FBgn0261611.1 194 336 +
Chr2	stalkie_big_nohaplotig	exon	35467165	35467357	100	-	.	Parent=FBgn0261611.1.mrna1;Target=FBgn0261611.1 1 193 +
Chr2	stalkie_big_nohaplotig	CDS	35439402	35439597	.	-	1	Parent=FBgn0261611.1.mrna1;Target=FBgn0261611.1 918 1113 +
Chr2	stalkie_big_nohaplotig	CDS	35439862	35439935	.	-	0	Parent=FBgn0261611.1.mrna1;Target=FBgn0261611.1 844 917 +
Chr2	stalkie_big_nohaplotig	CDS	35440231	35440372	.	-	1	Parent=FBgn0261611.1.mrna1;Target=FBgn0261611.1 702 843 +
Chr2	stalkie_big_nohaplotig	CDS	35442934	35443048	.	-	2	Parent=FBgn0261611.1.mrna1;Target=FBgn0261611.1 587 701 +
Chr2	stalkie_big_nohaplotig	CDS	35443108	35443357	.	-	0	Parent=FBgn0261611.1.mrna1;Target=FBgn0261611.1 337 586 +
Chr2	stalkie_big_nohaplotig	CDS	35443424	35443566	.	-	2	Parent=FBgn0261611.1.mrna1;Target=FBgn0261611.1 194 336 +
Chr2	stalkie_big_nohaplotig	CDS	35467165	35467357	.	-	0	Parent=FBgn0261611.1.mrna1;Target=FBgn0261611.1 1 193 +
Chr2	gffcl	locus	35444380	35444849	.	+	.	ID=RLOC_00016319;geneIDs=comp137726_c0_seq1.path1;transcripts=comp137726_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35444380	35444849	.	+	.	ID=comp137726_c0_seq1.mrna1;geneID=comp137726_c0_seq1.path1;Name=comp137726_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=470;mismatches=0;indels=0;unknowns=0;Target=comp137726_c0_seq1 470 1 .;CDS_Target=comp137726_c0_seq1 106 2 .;locus=RLOC_00016319
Chr2	stalkie_big_nohaplotig	exon	35444380	35444849	100	+	.	Parent=comp137726_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35444381	35444485	.	+	0	Parent=comp137726_c0_seq1.mrna1
Chr2	gffcl	locus	35449503	35451053	.	+	.	ID=RLOC_00016320;geneIDs=ORF2628.path1,comp159550_c0_seq1.path1;transcripts=ORF2628.mrna1,comp159550_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35449503	35451053	.	+	.	ID=ORF2628.mrna1;geneID=ORF2628.path1;Name=ORF2628;Dir=sensecoverage=100.0;identity=99.8;matches=829;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016320
Chr2	stalkie_big_nohaplotig	exon	35449503	35449615	100	+	.	Parent=ORF2628.mrna1;Target=ORF2628 1 113 +
Chr2	stalkie_big_nohaplotig	exon	35450278	35450532	99	+	.	Parent=ORF2628.mrna1;Target=ORF2628 114 368 +
Chr2	stalkie_big_nohaplotig	exon	35450591	35451053	100	+	.	Parent=ORF2628.mrna1;Target=ORF2628 369 831 +
Chr2	stalkie_big_nohaplotig	CDS	35449503	35449615	.	+	0	Parent=ORF2628.mrna1;Target=ORF2628 1 113 +
Chr2	stalkie_big_nohaplotig	CDS	35450278	35450532	.	+	1	Parent=ORF2628.mrna1;Target=ORF2628 114 368 +
Chr2	stalkie_big_nohaplotig	CDS	35450591	35451053	.	+	1	Parent=ORF2628.mrna1;Target=ORF2628 369 831 +
Chr2	stalkie_big_nohaplotig	mRNA	35449595	35450298	.	+	.	ID=comp159550_c0_seq1.mrna1;geneID=comp159550_c0_seq1.path1;Name=comp159550_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=691;mismatches=12;indels=1;unknowns=0;Target=comp159550_c0_seq1 703 1 .;CDS_Target=comp159550_c0_seq1 303 172 .;locus=RLOC_00016320
Chr2	stalkie_big_nohaplotig	exon	35449595	35450298	98	+	.	Parent=comp159550_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35449767	35449898	.	+	0	Parent=comp159550_c0_seq1.mrna1
Chr2	gffcl	locus	35453169	35453594	.	-	.	ID=RLOC_00016321;geneIDs=comp1371647_c0_seq1.path1;transcripts=comp1371647_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35453169	35453594	.	-	.	ID=comp1371647_c0_seq1.mrna1;geneID=comp1371647_c0_seq1.path1;Name=comp1371647_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=426;mismatches=0;indels=0;unknowns=0;Target=comp1371647_c0_seq1 426 1 .;CDS_Target=comp1371647_c0_seq1 284 165 .;locus=RLOC_00016321
Chr2	stalkie_big_nohaplotig	exon	35453169	35453594	100	-	.	Parent=comp1371647_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35453311	35453430	.	-	0	Parent=comp1371647_c0_seq1.mrna1
Chr2	gffcl	locus	35453973	35455219	.	-	.	ID=RLOC_00016322;geneIDs=comp161694_c2_seq1.path1;transcripts=comp161694_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35453973	35455219	.	-	.	ID=comp161694_c2_seq1.mrna1;geneID=comp161694_c2_seq1.path1;Name=comp161694_c2_seq1;Dir=indeterminatecoverage=87.4;identity=96.4;matches=1203;mismatches=33;indels=12;unknowns=0;Target=comp161694_c2_seq1 1237 1 .;CDS_Target=comp161694_c2_seq1 928 728 .;locus=RLOC_00016322
Chr2	stalkie_big_nohaplotig	exon	35453973	35455219	96	-	.	Parent=comp161694_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35454282	35454482	.	-	0	Parent=comp161694_c2_seq1.mrna1
Chr2	gffcl	locus	35456183	35456604	.	-	.	ID=RLOC_00016323;geneIDs=comp136634_c0_seq1.path1;transcripts=comp136634_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35456183	35456604	.	-	.	ID=comp136634_c0_seq1.mrna1;geneID=comp136634_c0_seq1.path1;Name=comp136634_c0_seq1;Dir=indeterminatecoverage=87.7;identity=99.5;matches=420;mismatches=2;indels=0;unknowns=0;Target=comp136634_c0_seq1 422 1 .;CDS_Target=comp136634_c0_seq1 406 362 .;locus=RLOC_00016323
Chr2	stalkie_big_nohaplotig	exon	35456183	35456604	99	-	.	Parent=comp136634_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35456199	35456243	.	-	0	Parent=comp136634_c0_seq1.mrna1
Chr2	gffcl	locus	35470259	35470697	.	-	.	ID=RLOC_00016324;geneIDs=comp118290_c0_seq1.path1;transcripts=comp118290_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35470259	35470697	.	-	.	ID=comp118290_c0_seq1.mrna1;geneID=comp118290_c0_seq1.path1;Name=comp118290_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=434;mismatches=5;indels=2;unknowns=0;Target=comp118290_c0_seq1 441 1 .;CDS_Target=comp118290_c0_seq1 108 1 .;locus=RLOC_00016324
Chr2	stalkie_big_nohaplotig	exon	35470259	35470697	98	-	.	Parent=comp118290_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35470590	35470697	.	-	0	Parent=comp118290_c0_seq1.mrna1
Chr2	gffcl	locus	35479647	35481023	.	-	.	ID=RLOC_00016325;geneIDs=FBgn0033999.1.path1;transcripts=FBgn0033999.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35479647	35481023	.	-	.	ID=FBgn0033999.1.mrna1;geneID=FBgn0033999.1.path1;Name=FBgn0033999.1;Dir=sensecoverage=100.0;identity=99.8;matches=1249;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016325
Chr2	stalkie_big_nohaplotig	exon	35479647	35480033	99	-	.	Parent=FBgn0033999.1.mrna1;Target=FBgn0033999.1 865 1251 +
Chr2	stalkie_big_nohaplotig	exon	35480099	35480821	100	-	.	Parent=FBgn0033999.1.mrna1;Target=FBgn0033999.1 142 864 +
Chr2	stalkie_big_nohaplotig	exon	35480883	35481023	100	-	.	Parent=FBgn0033999.1.mrna1;Target=FBgn0033999.1 1 141 +
Chr2	stalkie_big_nohaplotig	CDS	35479647	35480033	.	-	0	Parent=FBgn0033999.1.mrna1;Target=FBgn0033999.1 865 1251 +
Chr2	stalkie_big_nohaplotig	CDS	35480099	35480821	.	-	0	Parent=FBgn0033999.1.mrna1;Target=FBgn0033999.1 142 864 +
Chr2	stalkie_big_nohaplotig	CDS	35480883	35481023	.	-	0	Parent=FBgn0033999.1.mrna1;Target=FBgn0033999.1 1 141 +
Chr2	gffcl	locus	35482348	35485596	.	+	.	ID=RLOC_00016326;geneIDs=FBgn0039675.1.path1;transcripts=FBgn0039675.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35482348	35485596	.	+	.	ID=FBgn0039675.1.mrna1;geneID=FBgn0039675.1.path1;Name=FBgn0039675.1;Dir=sensecoverage=100.0;identity=98.7;matches=1255;mismatches=17;indels=0;unknowns=0;locus=RLOC_00016326
Chr2	stalkie_big_nohaplotig	exon	35482348	35482625	99	+	.	Parent=FBgn0039675.1.mrna1;Target=FBgn0039675.1 1 278 +
Chr2	stalkie_big_nohaplotig	exon	35482709	35483243	97	+	.	Parent=FBgn0039675.1.mrna1;Target=FBgn0039675.1 279 813 +
Chr2	stalkie_big_nohaplotig	exon	35485015	35485137	98	+	.	Parent=FBgn0039675.1.mrna1;Target=FBgn0039675.1 814 936 +
Chr2	stalkie_big_nohaplotig	exon	35485190	35485339	99	+	.	Parent=FBgn0039675.1.mrna1;Target=FBgn0039675.1 937 1086 +
Chr2	stalkie_big_nohaplotig	exon	35485411	35485596	98	+	.	Parent=FBgn0039675.1.mrna1;Target=FBgn0039675.1 1087 1272 +
Chr2	stalkie_big_nohaplotig	CDS	35482348	35482625	.	+	0	Parent=FBgn0039675.1.mrna1;Target=FBgn0039675.1 1 278 +
Chr2	stalkie_big_nohaplotig	CDS	35482709	35483243	.	+	1	Parent=FBgn0039675.1.mrna1;Target=FBgn0039675.1 279 813 +
Chr2	stalkie_big_nohaplotig	CDS	35485015	35485137	.	+	0	Parent=FBgn0039675.1.mrna1;Target=FBgn0039675.1 814 936 +
Chr2	stalkie_big_nohaplotig	CDS	35485190	35485339	.	+	0	Parent=FBgn0039675.1.mrna1;Target=FBgn0039675.1 937 1086 +
Chr2	stalkie_big_nohaplotig	CDS	35485411	35485596	.	+	0	Parent=FBgn0039675.1.mrna1;Target=FBgn0039675.1 1087 1272 +
Chr2	gffcl	locus	35491250	35491803	.	-	.	ID=RLOC_00016327;geneIDs=comp58664_c0_seq1.path1;transcripts=comp58664_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35491250	35491803	.	-	.	ID=comp58664_c0_seq1.mrna1;geneID=comp58664_c0_seq1.path1;Name=comp58664_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=554;mismatches=0;indels=2;unknowns=0;Target=comp58664_c0_seq1 556 1 .;CDS_Target=comp58664_c0_seq1 509 432 .;locus=RLOC_00016327
Chr2	stalkie_big_nohaplotig	exon	35491250	35491803	99	-	.	Parent=comp58664_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35491297	35491374	.	-	0	Parent=comp58664_c0_seq1.mrna1
Chr2	gffcl	locus	35494726	35495454	.	-	.	ID=RLOC_00016328;geneIDs=comp152727_c0_seq1.path1;transcripts=comp152727_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35494726	35495454	.	-	.	ID=comp152727_c0_seq1.mrna1;geneID=comp152727_c0_seq1.path1;Name=comp152727_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.5;matches=726;mismatches=3;indels=1;unknowns=0;Target=comp152727_c0_seq1 730 1 .;CDS_Target=comp152727_c0_seq1 160 2 .;locus=RLOC_00016328
Chr2	stalkie_big_nohaplotig	exon	35494726	35495454	99	-	.	Parent=comp152727_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35495295	35495453	.	-	0	Parent=comp152727_c0_seq1.mrna1
Chr2	gffcl	locus	35495593	35495843	.	-	.	ID=RLOC_00016329;geneIDs=comp154699_c2_seq1.path2;transcripts=comp154699_c2_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	35495593	35495843	.	-	.	ID=comp154699_c2_seq1.mrna2;geneID=comp154699_c2_seq1.path2;Name=comp154699_c2_seq1;Dir=indeterminatecoverage=22.8;identity=99.2;matches=249;mismatches=2;indels=0;unknowns=0;Target=comp154699_c2_seq1 1103 853 .;locus=RLOC_00016329
Chr2	stalkie_big_nohaplotig	exon	35495593	35495843	99	-	.	Parent=comp154699_c2_seq1.mrna2
Chr2	gffcl	locus	35496202	35496663	.	+	.	ID=RLOC_00016330;geneIDs=comp128824_c0_seq1.path1;transcripts=comp128824_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35496202	35496663	.	+	.	ID=comp128824_c0_seq1.mrna1;geneID=comp128824_c0_seq1.path1;Name=comp128824_c0_seq1;Dir=indeterminatecoverage=94.4;identity=98.5;matches=455;mismatches=1;indels=6;unknowns=0;Target=comp128824_c0_seq1 470 15 .;CDS_Target=comp128824_c0_seq1 405 316 .;locus=RLOC_00016330
Chr2	stalkie_big_nohaplotig	exon	35496202	35496663	98	+	.	Parent=comp128824_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35496509	35496598	.	+	0	Parent=comp128824_c0_seq1.mrna1
Chr2	gffcl	locus	35497366	35509245	.	-	.	ID=RLOC_00016331;geneIDs=FBgn0000253.5.path1;transcripts=FBgn0000253.5.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35497366	35509245	.	-	.	ID=FBgn0000253.5.mrna1;geneID=FBgn0000253.5.path1;Name=FBgn0000253.5;Dir=sensecoverage=92.5;identity=100.0;matches=444;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016331
Chr2	stalkie_big_nohaplotig	exon	35497366	35497391	100	-	.	Parent=FBgn0000253.5.mrna1;Target=FBgn0000253.5 455 480 +
Chr2	stalkie_big_nohaplotig	exon	35503604	35503846	100	-	.	Parent=FBgn0000253.5.mrna1;Target=FBgn0000253.5 212 454 +
Chr2	stalkie_big_nohaplotig	exon	35509071	35509245	100	-	.	Parent=FBgn0000253.5.mrna1;Target=FBgn0000253.5 37 211 +
Chr2	stalkie_big_nohaplotig	CDS	35497366	35497391	.	-	2	Parent=FBgn0000253.5.mrna1;Target=FBgn0000253.5 455 480 +
Chr2	stalkie_big_nohaplotig	CDS	35503604	35503846	.	-	2	Parent=FBgn0000253.5.mrna1;Target=FBgn0000253.5 212 454 +
Chr2	stalkie_big_nohaplotig	CDS	35509071	35509245	.	-	0	Parent=FBgn0000253.5.mrna1;Target=FBgn0000253.5 37 211 +
Chr2	gffcl	locus	35530099	35530526	.	-	.	ID=RLOC_00016332;geneIDs=comp142769_c0_seq1.path1;transcripts=comp142769_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35530099	35530526	.	-	.	ID=comp142769_c0_seq1.mrna1;geneID=comp142769_c0_seq1.path1;Name=comp142769_c0_seq1;Dir=indeterminatecoverage=94.1;identity=99.5;matches=426;mismatches=2;indels=0;unknowns=0;Target=comp142769_c0_seq1 428 1 .;CDS_Target=comp142769_c0_seq1 118 2 .;locus=RLOC_00016332
Chr2	stalkie_big_nohaplotig	exon	35530099	35530526	99	-	.	Parent=comp142769_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35530409	35530525	.	-	0	Parent=comp142769_c0_seq1.mrna1
Chr2	gffcl	locus	35574690	35576073	.	+	.	ID=RLOC_00016333;geneIDs=ORF1052.path1;transcripts=ORF1052.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35574690	35576073	.	+	.	ID=ORF1052.mrna1;geneID=ORF1052.path1;Name=ORF1052;Dir=sensecoverage=92.2;identity=98.4;matches=1145;mismatches=16;indels=3;unknowns=0;locus=RLOC_00016333
Chr2	stalkie_big_nohaplotig	exon	35574690	35574808	99	+	.	Parent=ORF1052.mrna1;Target=ORF1052 100 218 +
Chr2	stalkie_big_nohaplotig	exon	35574868	35575187	97	+	.	Parent=ORF1052.mrna1;Target=ORF1052 219 541 +
Chr2	stalkie_big_nohaplotig	exon	35575251	35575509	97	+	.	Parent=ORF1052.mrna1;Target=ORF1052 542 800 +
Chr2	stalkie_big_nohaplotig	exon	35575611	35576073	99	+	.	Parent=ORF1052.mrna1;Target=ORF1052 801 1263 +
Chr2	stalkie_big_nohaplotig	CDS	35574690	35574808	.	+	0	Parent=ORF1052.mrna1;Target=ORF1052 100 218 +
Chr2	stalkie_big_nohaplotig	CDS	35574868	35575187	.	+	1	Parent=ORF1052.mrna1;Target=ORF1052 219 541 +
Chr2	stalkie_big_nohaplotig	CDS	35575251	35575509	.	+	2	Parent=ORF1052.mrna1;Target=ORF1052 542 800 +
Chr2	stalkie_big_nohaplotig	CDS	35575611	35576073	.	+	1	Parent=ORF1052.mrna1;Target=ORF1052 801 1263 +
Chr2	gffcl	locus	35589803	35597443	.	+	.	ID=RLOC_00016334;geneIDs=FBgn0033698.1.path1;transcripts=FBgn0033698.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35589803	35597443	.	+	.	ID=FBgn0033698.1.mrna1;geneID=FBgn0033698.1.path1;Name=FBgn0033698.1;Dir=sensecoverage=100.0;identity=99.6;matches=5637;mismatches=21;indels=0;unknowns=0;locus=RLOC_00016334
Chr2	stalkie_big_nohaplotig	exon	35589803	35589851	100	+	.	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 1 49 +
Chr2	stalkie_big_nohaplotig	exon	35589959	35590089	99	+	.	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 50 180 +
Chr2	stalkie_big_nohaplotig	exon	35590160	35590392	100	+	.	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 181 413 +
Chr2	stalkie_big_nohaplotig	exon	35590455	35590698	99	+	.	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 414 657 +
Chr2	stalkie_big_nohaplotig	exon	35590761	35591164	99	+	.	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 658 1061 +
Chr2	stalkie_big_nohaplotig	exon	35591226	35591708	100	+	.	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 1062 1544 +
Chr2	stalkie_big_nohaplotig	exon	35591771	35592044	100	+	.	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 1545 1818 +
Chr2	stalkie_big_nohaplotig	exon	35592110	35592287	100	+	.	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 1819 1996 +
Chr2	stalkie_big_nohaplotig	exon	35592340	35592533	100	+	.	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 1997 2190 +
Chr2	stalkie_big_nohaplotig	exon	35592595	35592763	100	+	.	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 2191 2359 +
Chr2	stalkie_big_nohaplotig	exon	35592823	35592972	100	+	.	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 2360 2509 +
Chr2	stalkie_big_nohaplotig	exon	35593031	35593395	99	+	.	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 2510 2874 +
Chr2	stalkie_big_nohaplotig	exon	35593470	35593584	97	+	.	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 2875 2989 +
Chr2	stalkie_big_nohaplotig	exon	35594031	35594214	99	+	.	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 2990 3173 +
Chr2	stalkie_big_nohaplotig	exon	35594273	35594766	99	+	.	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 3174 3667 +
Chr2	stalkie_big_nohaplotig	exon	35594831	35594946	100	+	.	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 3668 3783 +
Chr2	stalkie_big_nohaplotig	exon	35595003	35595347	99	+	.	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 3784 4128 +
Chr2	stalkie_big_nohaplotig	exon	35595724	35595840	99	+	.	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 4129 4245 +
Chr2	stalkie_big_nohaplotig	exon	35595902	35596666	99	+	.	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 4246 5010 +
Chr2	stalkie_big_nohaplotig	exon	35596729	35597170	100	+	.	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 5011 5452 +
Chr2	stalkie_big_nohaplotig	exon	35597238	35597443	100	+	.	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 5453 5658 +
Chr2	stalkie_big_nohaplotig	CDS	35589803	35589851	.	+	0	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 1 49 +
Chr2	stalkie_big_nohaplotig	CDS	35589959	35590089	.	+	2	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 50 180 +
Chr2	stalkie_big_nohaplotig	CDS	35590160	35590392	.	+	0	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 181 413 +
Chr2	stalkie_big_nohaplotig	CDS	35590455	35590698	.	+	1	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 414 657 +
Chr2	stalkie_big_nohaplotig	CDS	35590761	35591164	.	+	0	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 658 1061 +
Chr2	stalkie_big_nohaplotig	CDS	35591226	35591708	.	+	1	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 1062 1544 +
Chr2	stalkie_big_nohaplotig	CDS	35591771	35592044	.	+	1	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 1545 1818 +
Chr2	stalkie_big_nohaplotig	CDS	35592110	35592287	.	+	0	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 1819 1996 +
Chr2	stalkie_big_nohaplotig	CDS	35592340	35592533	.	+	2	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 1997 2190 +
Chr2	stalkie_big_nohaplotig	CDS	35592595	35592763	.	+	0	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 2191 2359 +
Chr2	stalkie_big_nohaplotig	CDS	35592823	35592972	.	+	2	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 2360 2509 +
Chr2	stalkie_big_nohaplotig	CDS	35593031	35593395	.	+	2	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 2510 2874 +
Chr2	stalkie_big_nohaplotig	CDS	35593470	35593584	.	+	0	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 2875 2989 +
Chr2	stalkie_big_nohaplotig	CDS	35594031	35594214	.	+	2	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 2990 3173 +
Chr2	stalkie_big_nohaplotig	CDS	35594273	35594766	.	+	1	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 3174 3667 +
Chr2	stalkie_big_nohaplotig	CDS	35594831	35594946	.	+	2	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 3668 3783 +
Chr2	stalkie_big_nohaplotig	CDS	35595003	35595347	.	+	0	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 3784 4128 +
Chr2	stalkie_big_nohaplotig	CDS	35595724	35595840	.	+	0	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 4129 4245 +
Chr2	stalkie_big_nohaplotig	CDS	35595902	35596666	.	+	0	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 4246 5010 +
Chr2	stalkie_big_nohaplotig	CDS	35596729	35597170	.	+	0	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 5011 5452 +
Chr2	stalkie_big_nohaplotig	CDS	35597238	35597443	.	+	2	Parent=FBgn0033698.1.mrna1;Target=FBgn0033698.1 5453 5658 +
Chr2	gffcl	locus	35597648	35598455	.	+	.	ID=RLOC_00016335;geneIDs=comp93336_c0_seq1.path1;transcripts=comp93336_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35597648	35598455	.	+	.	ID=comp93336_c0_seq1.mrna1;geneID=comp93336_c0_seq1.path1;Name=comp93336_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=804;mismatches=0;indels=15;unknowns=0;Target=comp93336_c0_seq1 815 1 .;CDS_Target=comp93336_c0_seq1 631 506 .;locus=RLOC_00016335
Chr2	stalkie_big_nohaplotig	exon	35597648	35598455	98	+	.	Parent=comp93336_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35598146	35598271	.	+	0	Parent=comp93336_c0_seq1.mrna1
Chr2	gffcl	locus	35606646	35609955	.	+	.	ID=RLOC_00016336;geneIDs=FBgn0033696.1.path1;transcripts=FBgn0033696.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35606646	35609955	.	+	.	ID=FBgn0033696.1.mrna1;geneID=FBgn0033696.1.path1;Name=FBgn0033696.1;Dir=sensecoverage=100.0;identity=99.6;matches=1612;mismatches=5;indels=1;unknowns=0;locus=RLOC_00016336
Chr2	stalkie_big_nohaplotig	exon	35606646	35607177	99	+	.	Parent=FBgn0033696.1.mrna1;Target=FBgn0033696.1 1 531 +
Chr2	stalkie_big_nohaplotig	exon	35608803	35609606	99	+	.	Parent=FBgn0033696.1.mrna1;Target=FBgn0033696.1 532 1335 +
Chr2	stalkie_big_nohaplotig	exon	35609674	35609955	99	+	.	Parent=FBgn0033696.1.mrna1;Target=FBgn0033696.1 1336 1617 +
Chr2	stalkie_big_nohaplotig	CDS	35606674	35607177	.	+	0	Parent=FBgn0033696.1.mrna1;Target=FBgn0033696.1 28 531 +
Chr2	stalkie_big_nohaplotig	CDS	35608803	35609606	.	+	0	Parent=FBgn0033696.1.mrna1;Target=FBgn0033696.1 532 1335 +
Chr2	stalkie_big_nohaplotig	CDS	35609674	35609955	.	+	0	Parent=FBgn0033696.1.mrna1;Target=FBgn0033696.1 1336 1617 +
Chr2	gffcl	locus	35615719	35615991	.	+	.	ID=RLOC_00016337;geneIDs=comp136007_c0_seq1.path1;transcripts=comp136007_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35615719	35615991	.	+	.	ID=comp136007_c0_seq1.mrna1;geneID=comp136007_c0_seq1.path1;Name=comp136007_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.3;matches=263;mismatches=10;indels=0;unknowns=0;Target=comp136007_c0_seq1 273 1 .;CDS_Target=comp136007_c0_seq1 199 2 .;locus=RLOC_00016337
Chr2	stalkie_big_nohaplotig	exon	35615719	35615991	96	+	.	Parent=comp136007_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35615720	35615917	.	+	0	Parent=comp136007_c0_seq1.mrna1
Chr2	gffcl	locus	35617128	35617927	.	-	.	ID=RLOC_00016338;geneIDs=comp154830_c0_seq1.path1;transcripts=comp154830_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35617128	35617927	.	-	.	ID=comp154830_c0_seq1.mrna1;geneID=comp154830_c0_seq1.path1;Name=comp154830_c0_seq1;Dir=indeterminatecoverage=99.3;identity=89.6;matches=717;mismatches=24;indels=59;unknowns=0;Target=comp154830_c0_seq1 746 6 .;CDS_Target=comp154830_c0_seq1 744 622 .;locus=RLOC_00016338
Chr2	stalkie_big_nohaplotig	exon	35617128	35617927	89	-	.	Parent=comp154830_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35617130	35617252	.	-	0	Parent=comp154830_c0_seq1.mrna1
Chr2	gffcl	locus	35625479	35626294	.	+	.	ID=RLOC_00016339;geneIDs=FBgn0033457.1.path1;transcripts=FBgn0033457.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35625479	35626294	.	+	.	ID=FBgn0033457.1.mrna1;geneID=FBgn0033457.1.path1;Name=FBgn0033457.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=816;mismatches=0;indels=0;unknowns=0;Target=FBgn0033457.1 816 1 .;locus=RLOC_00016339
Chr2	stalkie_big_nohaplotig	exon	35625479	35626294	100	+	.	Parent=FBgn0033457.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35625479	35626294	.	+	0	Parent=FBgn0033457.1.mrna1
Chr2	gffcl	locus	35626764	35757144	.	-	.	ID=RLOC_00016340;geneIDs=comp154196_c2_seq1.path1,comp155835_c0_seq1.path1;transcripts=comp154196_c2_seq1.mrna1,comp155835_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35626764	35757144	.	-	.	ID=comp154196_c2_seq1.mrna1;geneID=comp154196_c2_seq1.path1;Name=comp154196_c2_seq1;Dir=sensecoverage=79.0;identity=99.7;matches=2384;mismatches=4;indels=4;unknowns=0;locus=RLOC_00016340
Chr2	stalkie_big_nohaplotig	exon	35626764	35626771	100	-	.	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 2910 2917 +
Chr2	stalkie_big_nohaplotig	exon	35631584	35631587	100	-	.	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 2906 2909 +
Chr2	stalkie_big_nohaplotig	exon	35636888	35636897	80	-	.	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 2896 2905 +
Chr2	stalkie_big_nohaplotig	exon	35650515	35650517	100	-	.	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 2893 2895 +
Chr2	stalkie_big_nohaplotig	exon	35652559	35652564	100	-	.	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 2887 2892 +
Chr2	stalkie_big_nohaplotig	exon	35655134	35655143	100	-	.	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 2877 2886 +
Chr2	stalkie_big_nohaplotig	exon	35659833	35659838	100	-	.	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 2871 2876 +
Chr2	stalkie_big_nohaplotig	exon	35671350	35671351	100	-	.	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 2869 2870 +
Chr2	stalkie_big_nohaplotig	exon	35677296	35677300	100	-	.	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 2864 2868 +
Chr2	stalkie_big_nohaplotig	exon	35677925	35677927	100	-	.	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 2861 2863 +
Chr2	stalkie_big_nohaplotig	exon	35684390	35684393	100	-	.	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 2857 2860 +
Chr2	stalkie_big_nohaplotig	exon	35692060	35692064	100	-	.	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 2852 2856 +
Chr2	stalkie_big_nohaplotig	exon	35698663	35698664	100	-	.	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 2850 2851 +
Chr2	stalkie_big_nohaplotig	exon	35712998	35713001	100	-	.	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 2846 2849 +
Chr2	stalkie_big_nohaplotig	exon	35727475	35727477	100	-	.	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 2843 2845 +
Chr2	stalkie_big_nohaplotig	exon	35730651	35730655	100	-	.	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 2838 2842 +
Chr2	stalkie_big_nohaplotig	exon	35737013	35737014	100	-	.	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 2836 2837 +
Chr2	stalkie_big_nohaplotig	exon	35750786	35750789	100	-	.	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 2832 2835 +
Chr2	stalkie_big_nohaplotig	exon	35752920	35753908	99	-	.	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 1842 2831 +
Chr2	stalkie_big_nohaplotig	exon	35755711	35755880	100	-	.	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 1672 1841 +
Chr2	stalkie_big_nohaplotig	exon	35755944	35756222	100	-	.	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 1393 1671 +
Chr2	stalkie_big_nohaplotig	exon	35756281	35757144	99	-	.	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 526 1392 +
Chr2	stalkie_big_nohaplotig	CDS	35755716	35755880	.	-	0	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 1672 1836 +
Chr2	stalkie_big_nohaplotig	CDS	35755944	35756222	.	-	0	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 1393 1671 +
Chr2	stalkie_big_nohaplotig	CDS	35756281	35757144	.	-	0	Parent=comp154196_c2_seq1.mrna1;Target=comp154196_c2_seq1 526 1392 +
Chr2	stalkie_big_nohaplotig	mRNA	35683183	35685583	.	-	.	ID=comp155835_c0_seq1.mrna1;geneID=comp155835_c0_seq1.path1;Name=comp155835_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=2276;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016340
Chr2	stalkie_big_nohaplotig	exon	35683183	35683963	100	-	.	Parent=comp155835_c0_seq1.mrna1;Target=comp155835_c0_seq1 1502 2282 +
Chr2	stalkie_big_nohaplotig	exon	35684023	35685033	100	-	.	Parent=comp155835_c0_seq1.mrna1;Target=comp155835_c0_seq1 491 1501 +
Chr2	stalkie_big_nohaplotig	exon	35685094	35685583	98	-	.	Parent=comp155835_c0_seq1.mrna1;Target=comp155835_c0_seq1 1 490 +
Chr2	stalkie_big_nohaplotig	CDS	35683676	35683963	.	-	0	Parent=comp155835_c0_seq1.mrna1;Target=comp155835_c0_seq1 1502 1789 +
Chr2	stalkie_big_nohaplotig	CDS	35684023	35684874	.	-	0	Parent=comp155835_c0_seq1.mrna1;Target=comp155835_c0_seq1 650 1501 +
Chr2	gffcl	locus	35627501	35630132	.	+	.	ID=RLOC_00016341;geneIDs=FBgn0027091.1.path1;transcripts=FBgn0027091.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35627501	35630132	.	+	.	ID=FBgn0027091.1.mrna1;geneID=FBgn0027091.1.path1;Name=FBgn0027091.1;Dir=sensecoverage=100.0;identity=99.9;matches=2332;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016341
Chr2	stalkie_big_nohaplotig	exon	35627501	35627790	100	+	.	Parent=FBgn0027091.1.mrna1;Target=FBgn0027091.1 1 290 +
Chr2	stalkie_big_nohaplotig	exon	35627881	35628370	100	+	.	Parent=FBgn0027091.1.mrna1;Target=FBgn0027091.1 291 780 +
Chr2	stalkie_big_nohaplotig	exon	35628418	35629104	100	+	.	Parent=FBgn0027091.1.mrna1;Target=FBgn0027091.1 781 1467 +
Chr2	stalkie_big_nohaplotig	exon	35629160	35629307	99	+	.	Parent=FBgn0027091.1.mrna1;Target=FBgn0027091.1 1468 1615 +
Chr2	stalkie_big_nohaplotig	exon	35629363	35629952	100	+	.	Parent=FBgn0027091.1.mrna1;Target=FBgn0027091.1 1616 2205 +
Chr2	stalkie_big_nohaplotig	exon	35630004	35630132	99	+	.	Parent=FBgn0027091.1.mrna1;Target=FBgn0027091.1 2206 2334 +
Chr2	stalkie_big_nohaplotig	CDS	35627501	35627790	.	+	0	Parent=FBgn0027091.1.mrna1;Target=FBgn0027091.1 1 290 +
Chr2	stalkie_big_nohaplotig	CDS	35627881	35628370	.	+	1	Parent=FBgn0027091.1.mrna1;Target=FBgn0027091.1 291 780 +
Chr2	stalkie_big_nohaplotig	CDS	35628418	35629104	.	+	0	Parent=FBgn0027091.1.mrna1;Target=FBgn0027091.1 781 1467 +
Chr2	stalkie_big_nohaplotig	CDS	35629160	35629307	.	+	0	Parent=FBgn0027091.1.mrna1;Target=FBgn0027091.1 1468 1615 +
Chr2	stalkie_big_nohaplotig	CDS	35629363	35629952	.	+	2	Parent=FBgn0027091.1.mrna1;Target=FBgn0027091.1 1616 2205 +
Chr2	stalkie_big_nohaplotig	CDS	35630004	35630132	.	+	0	Parent=FBgn0027091.1.mrna1;Target=FBgn0027091.1 2206 2334 +
Chr2	gffcl	locus	35630235	35631329	.	-	.	ID=RLOC_00016342;geneIDs=FBgn0039301.1.path1;transcripts=FBgn0039301.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35630235	35631329	.	-	.	ID=FBgn0039301.1.mrna1;geneID=FBgn0039301.1.path1;Name=FBgn0039301.1;Dir=sensecoverage=100.0;identity=99.8;matches=991;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016342
Chr2	stalkie_big_nohaplotig	exon	35630235	35630845	99	-	.	Parent=FBgn0039301.1.mrna1;Target=FBgn0039301.1 383 993 +
Chr2	stalkie_big_nohaplotig	exon	35630898	35631102	100	-	.	Parent=FBgn0039301.1.mrna1;Target=FBgn0039301.1 178 382 +
Chr2	stalkie_big_nohaplotig	exon	35631153	35631329	100	-	.	Parent=FBgn0039301.1.mrna1;Target=FBgn0039301.1 1 177 +
Chr2	stalkie_big_nohaplotig	CDS	35630235	35630845	.	-	2	Parent=FBgn0039301.1.mrna1;Target=FBgn0039301.1 383 993 +
Chr2	stalkie_big_nohaplotig	CDS	35630898	35631102	.	-	0	Parent=FBgn0039301.1.mrna1;Target=FBgn0039301.1 178 382 +
Chr2	stalkie_big_nohaplotig	CDS	35631153	35631329	.	-	0	Parent=FBgn0039301.1.mrna1;Target=FBgn0039301.1 1 177 +
Chr2	gffcl	locus	35632401	35636817	.	+	.	ID=RLOC_00016343;geneIDs=FBgn0033557.1.path1;transcripts=FBgn0033557.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35632401	35636817	.	+	.	ID=FBgn0033557.1.mrna1;geneID=FBgn0033557.1.path1;Name=FBgn0033557.1;Dir=sensecoverage=100.0;identity=100.0;matches=2894;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016343
Chr2	stalkie_big_nohaplotig	exon	35632401	35632424	100	+	.	Parent=FBgn0033557.1.mrna1;Target=FBgn0033557.1 1 24 +
Chr2	stalkie_big_nohaplotig	exon	35632482	35632594	100	+	.	Parent=FBgn0033557.1.mrna1;Target=FBgn0033557.1 25 137 +
Chr2	stalkie_big_nohaplotig	exon	35632650	35633659	100	+	.	Parent=FBgn0033557.1.mrna1;Target=FBgn0033557.1 138 1147 +
Chr2	stalkie_big_nohaplotig	exon	35633753	35634005	100	+	.	Parent=FBgn0033557.1.mrna1;Target=FBgn0033557.1 1148 1400 +
Chr2	stalkie_big_nohaplotig	exon	35634087	35634426	100	+	.	Parent=FBgn0033557.1.mrna1;Target=FBgn0033557.1 1401 1740 +
Chr2	stalkie_big_nohaplotig	exon	35634489	35634634	100	+	.	Parent=FBgn0033557.1.mrna1;Target=FBgn0033557.1 1741 1886 +
Chr2	stalkie_big_nohaplotig	exon	35634696	35634843	99	+	.	Parent=FBgn0033557.1.mrna1;Target=FBgn0033557.1 1887 2034 +
Chr2	stalkie_big_nohaplotig	exon	35635041	35635275	100	+	.	Parent=FBgn0033557.1.mrna1;Target=FBgn0033557.1 2035 2269 +
Chr2	stalkie_big_nohaplotig	exon	35635336	35635497	100	+	.	Parent=FBgn0033557.1.mrna1;Target=FBgn0033557.1 2270 2431 +
Chr2	stalkie_big_nohaplotig	exon	35636269	35636485	100	+	.	Parent=FBgn0033557.1.mrna1;Target=FBgn0033557.1 2432 2648 +
Chr2	stalkie_big_nohaplotig	exon	35636571	35636817	100	+	.	Parent=FBgn0033557.1.mrna1;Target=FBgn0033557.1 2649 2895 +
Chr2	stalkie_big_nohaplotig	CDS	35632401	35632424	.	+	0	Parent=FBgn0033557.1.mrna1;Target=FBgn0033557.1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	35632482	35632594	.	+	0	Parent=FBgn0033557.1.mrna1;Target=FBgn0033557.1 25 137 +
Chr2	stalkie_big_nohaplotig	CDS	35632650	35633659	.	+	1	Parent=FBgn0033557.1.mrna1;Target=FBgn0033557.1 138 1147 +
Chr2	stalkie_big_nohaplotig	CDS	35633753	35634005	.	+	2	Parent=FBgn0033557.1.mrna1;Target=FBgn0033557.1 1148 1400 +
Chr2	stalkie_big_nohaplotig	CDS	35634087	35634426	.	+	1	Parent=FBgn0033557.1.mrna1;Target=FBgn0033557.1 1401 1740 +
Chr2	stalkie_big_nohaplotig	CDS	35634489	35634634	.	+	0	Parent=FBgn0033557.1.mrna1;Target=FBgn0033557.1 1741 1886 +
Chr2	stalkie_big_nohaplotig	CDS	35634696	35634843	.	+	1	Parent=FBgn0033557.1.mrna1;Target=FBgn0033557.1 1887 2034 +
Chr2	stalkie_big_nohaplotig	CDS	35635041	35635275	.	+	0	Parent=FBgn0033557.1.mrna1;Target=FBgn0033557.1 2035 2269 +
Chr2	stalkie_big_nohaplotig	CDS	35635336	35635497	.	+	2	Parent=FBgn0033557.1.mrna1;Target=FBgn0033557.1 2270 2431 +
Chr2	stalkie_big_nohaplotig	CDS	35636269	35636485	.	+	2	Parent=FBgn0033557.1.mrna1;Target=FBgn0033557.1 2432 2648 +
Chr2	stalkie_big_nohaplotig	CDS	35636571	35636817	.	+	1	Parent=FBgn0033557.1.mrna1;Target=FBgn0033557.1 2649 2895 +
Chr2	gffcl	locus	35639799	35640221	.	+	.	ID=RLOC_00016344;geneIDs=comp146732_c0_seq1.path1;transcripts=comp146732_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35639799	35640221	.	+	.	ID=comp146732_c0_seq1.mrna1;geneID=comp146732_c0_seq1.path1;Name=comp146732_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=423;mismatches=0;indels=0;unknowns=0;Target=comp146732_c0_seq1 423 1 .;CDS_Target=comp146732_c0_seq1 84 1 .;locus=RLOC_00016344
Chr2	stalkie_big_nohaplotig	exon	35639799	35640221	100	+	.	Parent=comp146732_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35639799	35639882	.	+	0	Parent=comp146732_c0_seq1.mrna1
Chr2	gffcl	locus	35640690	35647975	.	-	.	ID=RLOC_00016345;geneIDs=FBgn0033558.1.path1;transcripts=FBgn0033558.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35640690	35647975	.	-	.	ID=FBgn0033558.1.mrna1;geneID=FBgn0033558.1.path1;Name=FBgn0033558.1;Dir=sensecoverage=100.0;identity=99.8;matches=1039;mismatches=1;indels=1;unknowns=0;Target=FBgn0033558.1 3 23 +;locus=RLOC_00016345
Chr2	stalkie_big_nohaplotig	exon	35640690	35640899	100	-	.	Parent=FBgn0033558.1.mrna1;Target=FBgn0033558.1 832 1041 +
Chr2	stalkie_big_nohaplotig	exon	35642427	35642531	100	-	.	Parent=FBgn0033558.1.mrna1;Target=FBgn0033558.1 727 831 +
Chr2	stalkie_big_nohaplotig	exon	35642652	35642780	100	-	.	Parent=FBgn0033558.1.mrna1;Target=FBgn0033558.1 598 726 +
Chr2	stalkie_big_nohaplotig	exon	35642869	35643239	100	-	.	Parent=FBgn0033558.1.mrna1;Target=FBgn0033558.1 227 597 +
Chr2	stalkie_big_nohaplotig	exon	35643312	35643467	100	-	.	Parent=FBgn0033558.1.mrna1;Target=FBgn0033558.1 71 226 +
Chr2	stalkie_big_nohaplotig	exon	35647907	35647975	97	-	.	Parent=FBgn0033558.1.mrna1;Target=FBgn0033558.1 1 70 +
Chr2	stalkie_big_nohaplotig	CDS	35647954	35647973	.	-	0	Parent=FBgn0033558.1.mrna1
Chr2	gffcl	locus	35680587	35682268	.	+	.	ID=RLOC_00016346;geneIDs=FBgn0033693.1.path1,FBgn0053964.1.path1;transcripts=FBgn0053964.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35680997	35682268	.	+	.	ID=FBgn0053964.1.mrna1;geneID=FBgn0053964.1.path1;Name=FBgn0053964.1;Dir=sensecoverage=100.0;identity=99.8;matches=1156;mismatches=1;indels=1;unknowns=0;locus=RLOC_00016346
Chr2	stalkie_big_nohaplotig	exon	35680997	35681449	99	+	.	Parent=FBgn0053964.1.mrna1;Target=FBgn0053964.1 1 453 +
Chr2	stalkie_big_nohaplotig	exon	35681507	35681710	100	+	.	Parent=FBgn0053964.1.mrna1;Target=FBgn0053964.1 454 657 +
Chr2	stalkie_big_nohaplotig	exon	35681769	35682268	99	+	.	Parent=FBgn0053964.1.mrna1;Target=FBgn0053964.1 658 1158 +
Chr2	stalkie_big_nohaplotig	CDS	35680997	35681449	.	+	0	Parent=FBgn0053964.1.mrna1;Target=FBgn0053964.1 1 453 +
Chr2	stalkie_big_nohaplotig	CDS	35681507	35681710	.	+	0	Parent=FBgn0053964.1.mrna1;Target=FBgn0053964.1 454 657 +
Chr2	stalkie_big_nohaplotig	CDS	35681769	35682268	.	+	0	Parent=FBgn0053964.1.mrna1;Target=FBgn0053964.1 658 1158 +
Chr2	gffcl	locus	35686109	35687496	.	+	.	ID=RLOC_00016347;geneIDs=FBgn0033697.1.path1;transcripts=FBgn0033697.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35686109	35687496	.	+	.	ID=FBgn0033697.1.mrna1;geneID=FBgn0033697.1.path1;Name=FBgn0033697.1;Dir=sensecoverage=100.0;identity=99.5;matches=1310;mismatches=7;indels=0;unknowns=0;locus=RLOC_00016347
Chr2	stalkie_big_nohaplotig	exon	35686109	35687134	99	+	.	Parent=FBgn0033697.1.mrna1;Target=FBgn0033697.1 1 1026 +
Chr2	stalkie_big_nohaplotig	exon	35687206	35687496	99	+	.	Parent=FBgn0033697.1.mrna1;Target=FBgn0033697.1 1027 1317 +
Chr2	stalkie_big_nohaplotig	CDS	35686109	35687134	.	+	0	Parent=FBgn0033697.1.mrna1;Target=FBgn0033697.1 1 1026 +
Chr2	stalkie_big_nohaplotig	CDS	35687206	35687496	.	+	0	Parent=FBgn0033697.1.mrna1;Target=FBgn0033697.1 1027 1317 +
Chr2	gffcl	locus	35699136	35701182	.	+	.	ID=RLOC_00016348;geneIDs=FBgn0039415.1.path1;transcripts=FBgn0039415.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35699136	35701182	.	+	.	ID=FBgn0039415.1.mrna1;geneID=FBgn0039415.1.path1;Name=FBgn0039415.1;Dir=sensecoverage=99.9;identity=99.3;matches=1845;mismatches=13;indels=0;unknowns=0;locus=RLOC_00016348
Chr2	stalkie_big_nohaplotig	exon	35699136	35700366	99	+	.	Parent=FBgn0039415.1.mrna1;Target=FBgn0039415.1 1 1231 +
Chr2	stalkie_big_nohaplotig	exon	35700427	35700560	100	+	.	Parent=FBgn0039415.1.mrna1;Target=FBgn0039415.1 1232 1365 +
Chr2	stalkie_big_nohaplotig	exon	35700630	35700782	99	+	.	Parent=FBgn0039415.1.mrna1;Target=FBgn0039415.1 1366 1518 +
Chr2	stalkie_big_nohaplotig	exon	35700843	35701182	98	+	.	Parent=FBgn0039415.1.mrna1;Target=FBgn0039415.1 1519 1858 +
Chr2	stalkie_big_nohaplotig	CDS	35699136	35700366	.	+	0	Parent=FBgn0039415.1.mrna1;Target=FBgn0039415.1 1 1231 +
Chr2	stalkie_big_nohaplotig	CDS	35700427	35700560	.	+	2	Parent=FBgn0039415.1.mrna1;Target=FBgn0039415.1 1232 1365 +
Chr2	stalkie_big_nohaplotig	CDS	35700630	35700782	.	+	0	Parent=FBgn0039415.1.mrna1;Target=FBgn0039415.1 1366 1518 +
Chr2	stalkie_big_nohaplotig	CDS	35700843	35701181	.	+	0	Parent=FBgn0039415.1.mrna1;Target=FBgn0039415.1 1519 1857 +
Chr2	gffcl	locus	35715330	35717961	.	-	.	ID=RLOC_00016349;geneIDs=FBgn0027091.1.path2;transcripts=FBgn0027091.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	35715330	35717961	.	-	.	ID=FBgn0027091.1.mrna2;geneID=FBgn0027091.1.path2;Name=FBgn0027091.1;Dir=sensecoverage=100.0;identity=99.9;matches=2331;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016349
Chr2	stalkie_big_nohaplotig	exon	35715330	35715458	99	-	.	Parent=FBgn0027091.1.mrna2;Target=FBgn0027091.1 2206 2334 +
Chr2	stalkie_big_nohaplotig	exon	35715510	35716099	100	-	.	Parent=FBgn0027091.1.mrna2;Target=FBgn0027091.1 1616 2205 +
Chr2	stalkie_big_nohaplotig	exon	35716155	35716302	99	-	.	Parent=FBgn0027091.1.mrna2;Target=FBgn0027091.1 1468 1615 +
Chr2	stalkie_big_nohaplotig	exon	35716358	35717044	100	-	.	Parent=FBgn0027091.1.mrna2;Target=FBgn0027091.1 781 1467 +
Chr2	stalkie_big_nohaplotig	exon	35717092	35717581	100	-	.	Parent=FBgn0027091.1.mrna2;Target=FBgn0027091.1 291 780 +
Chr2	stalkie_big_nohaplotig	exon	35717672	35717961	99	-	.	Parent=FBgn0027091.1.mrna2;Target=FBgn0027091.1 1 290 +
Chr2	stalkie_big_nohaplotig	CDS	35715330	35715458	.	-	0	Parent=FBgn0027091.1.mrna2;Target=FBgn0027091.1 2206 2334 +
Chr2	stalkie_big_nohaplotig	CDS	35715510	35716099	.	-	2	Parent=FBgn0027091.1.mrna2;Target=FBgn0027091.1 1616 2205 +
Chr2	stalkie_big_nohaplotig	CDS	35716155	35716302	.	-	0	Parent=FBgn0027091.1.mrna2;Target=FBgn0027091.1 1468 1615 +
Chr2	stalkie_big_nohaplotig	CDS	35716358	35717044	.	-	0	Parent=FBgn0027091.1.mrna2;Target=FBgn0027091.1 781 1467 +
Chr2	stalkie_big_nohaplotig	CDS	35717092	35717581	.	-	1	Parent=FBgn0027091.1.mrna2;Target=FBgn0027091.1 291 780 +
Chr2	stalkie_big_nohaplotig	CDS	35717672	35717961	.	-	0	Parent=FBgn0027091.1.mrna2;Target=FBgn0027091.1 1 290 +
Chr2	gffcl	locus	35719168	35719983	.	-	.	ID=RLOC_00016350;geneIDs=FBgn0033457.1.path2;transcripts=FBgn0033457.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	35719168	35719983	.	-	.	ID=FBgn0033457.1.mrna2;geneID=FBgn0033457.1.path2;Name=FBgn0033457.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=813;mismatches=3;indels=0;unknowns=0;Target=FBgn0033457.1 816 1 .;locus=RLOC_00016350
Chr2	stalkie_big_nohaplotig	exon	35719168	35719983	99	-	.	Parent=FBgn0033457.1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	35719168	35719983	.	-	0	Parent=FBgn0033457.1.mrna2
Chr2	gffcl	locus	35726731	35741322	.	+	.	ID=RLOC_00016352;geneIDs=FBgn0022063.1.path1,comp158364_c0_seq1.path1;transcripts=comp158364_c0_seq1.mrna1,FBgn0022063.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35726731	35741322	.	+	.	ID=comp158364_c0_seq1.mrna1;geneID=comp158364_c0_seq1.path1;Name=comp158364_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=6470;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016352
Chr2	stalkie_big_nohaplotig	exon	35726731	35727017	99	+	.	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 1 287 +
Chr2	stalkie_big_nohaplotig	exon	35728546	35728837	99	+	.	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 288 579 +
Chr2	stalkie_big_nohaplotig	exon	35731814	35731939	100	+	.	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 580 705 +
Chr2	stalkie_big_nohaplotig	exon	35732002	35732178	100	+	.	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 706 882 +
Chr2	stalkie_big_nohaplotig	exon	35732246	35732620	100	+	.	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 883 1257 +
Chr2	stalkie_big_nohaplotig	exon	35732685	35733426	99	+	.	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 1258 1999 +
Chr2	stalkie_big_nohaplotig	exon	35735420	35735636	100	+	.	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 2000 2216 +
Chr2	stalkie_big_nohaplotig	exon	35735707	35735863	100	+	.	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 2217 2373 +
Chr2	stalkie_big_nohaplotig	exon	35736844	35736961	100	+	.	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 2374 2491 +
Chr2	stalkie_big_nohaplotig	exon	35737019	35739348	100	+	.	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 2492 4821 +
Chr2	stalkie_big_nohaplotig	exon	35739423	35739528	100	+	.	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 4822 4927 +
Chr2	stalkie_big_nohaplotig	exon	35739721	35740134	100	+	.	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 4928 5341 +
Chr2	stalkie_big_nohaplotig	exon	35740191	35741322	100	+	.	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 5342 6473 +
Chr2	stalkie_big_nohaplotig	CDS	35728655	35728837	.	+	0	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 397 579 +
Chr2	stalkie_big_nohaplotig	CDS	35731814	35731939	.	+	0	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 580 705 +
Chr2	stalkie_big_nohaplotig	CDS	35732002	35732178	.	+	0	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 706 882 +
Chr2	stalkie_big_nohaplotig	CDS	35732246	35732620	.	+	0	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 883 1257 +
Chr2	stalkie_big_nohaplotig	CDS	35732685	35733426	.	+	0	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 1258 1999 +
Chr2	stalkie_big_nohaplotig	CDS	35735420	35735636	.	+	2	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 2000 2216 +
Chr2	stalkie_big_nohaplotig	CDS	35735707	35735863	.	+	1	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 2217 2373 +
Chr2	stalkie_big_nohaplotig	CDS	35736844	35736961	.	+	0	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 2374 2491 +
Chr2	stalkie_big_nohaplotig	CDS	35737019	35739348	.	+	2	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 2492 4821 +
Chr2	stalkie_big_nohaplotig	CDS	35739423	35739528	.	+	0	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 4822 4927 +
Chr2	stalkie_big_nohaplotig	CDS	35739721	35740134	.	+	2	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 4928 5341 +
Chr2	stalkie_big_nohaplotig	CDS	35740191	35740918	.	+	2	Parent=comp158364_c0_seq1.mrna1;Target=comp158364_c0_seq1 5342 6069 +
Chr2	stalkie_big_nohaplotig	mRNA	35735179	35740915	.	+	.	ID=FBgn0022063.1.mrna1;geneID=FBgn0022063.1.path1;Name=FBgn0022063.1;Dir=sensecoverage=100.0;identity=100.0;matches=4308;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016352
Chr2	stalkie_big_nohaplotig	exon	35735179	35735636	100	+	.	Parent=FBgn0022063.1.mrna1;Target=FBgn0022063.1 1 458 +
Chr2	stalkie_big_nohaplotig	exon	35735707	35735863	100	+	.	Parent=FBgn0022063.1.mrna1;Target=FBgn0022063.1 459 615 +
Chr2	stalkie_big_nohaplotig	exon	35736844	35736961	100	+	.	Parent=FBgn0022063.1.mrna1;Target=FBgn0022063.1 616 733 +
Chr2	stalkie_big_nohaplotig	exon	35737019	35739348	100	+	.	Parent=FBgn0022063.1.mrna1;Target=FBgn0022063.1 734 3063 +
Chr2	stalkie_big_nohaplotig	exon	35739423	35739528	100	+	.	Parent=FBgn0022063.1.mrna1;Target=FBgn0022063.1 3064 3169 +
Chr2	stalkie_big_nohaplotig	exon	35739721	35740134	100	+	.	Parent=FBgn0022063.1.mrna1;Target=FBgn0022063.1 3170 3583 +
Chr2	stalkie_big_nohaplotig	exon	35740191	35740915	100	+	.	Parent=FBgn0022063.1.mrna1;Target=FBgn0022063.1 3584 4308 +
Chr2	stalkie_big_nohaplotig	CDS	35735179	35735636	.	+	0	Parent=FBgn0022063.1.mrna1;Target=FBgn0022063.1 1 458 +
Chr2	stalkie_big_nohaplotig	CDS	35735707	35735863	.	+	1	Parent=FBgn0022063.1.mrna1;Target=FBgn0022063.1 459 615 +
Chr2	stalkie_big_nohaplotig	CDS	35736844	35736961	.	+	0	Parent=FBgn0022063.1.mrna1;Target=FBgn0022063.1 616 733 +
Chr2	stalkie_big_nohaplotig	CDS	35737019	35739348	.	+	2	Parent=FBgn0022063.1.mrna1;Target=FBgn0022063.1 734 3063 +
Chr2	stalkie_big_nohaplotig	CDS	35739423	35739528	.	+	0	Parent=FBgn0022063.1.mrna1;Target=FBgn0022063.1 3064 3169 +
Chr2	stalkie_big_nohaplotig	CDS	35739721	35740134	.	+	2	Parent=FBgn0022063.1.mrna1;Target=FBgn0022063.1 3170 3583 +
Chr2	stalkie_big_nohaplotig	CDS	35740191	35740915	.	+	2	Parent=FBgn0022063.1.mrna1;Target=FBgn0022063.1 3584 4308 +
Chr2	gffcl	locus	35745424	35746767	.	+	.	ID=RLOC_00016353;geneIDs=FBgn0033902.1.path1;transcripts=FBgn0033902.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35745424	35746767	.	+	.	ID=FBgn0033902.1.mrna1;geneID=FBgn0033902.1.path1;Name=FBgn0033902.1;Dir=sensecoverage=100.0;identity=100.0;matches=1164;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016353
Chr2	stalkie_big_nohaplotig	exon	35745424	35745471	100	+	.	Parent=FBgn0033902.1.mrna1;Target=FBgn0033902.1 1 48 +
Chr2	stalkie_big_nohaplotig	exon	35745592	35745771	100	+	.	Parent=FBgn0033902.1.mrna1;Target=FBgn0033902.1 49 228 +
Chr2	stalkie_big_nohaplotig	exon	35745832	35746767	100	+	.	Parent=FBgn0033902.1.mrna1;Target=FBgn0033902.1 229 1164 +
Chr2	stalkie_big_nohaplotig	CDS	35745424	35745471	.	+	0	Parent=FBgn0033902.1.mrna1;Target=FBgn0033902.1 1 48 +
Chr2	stalkie_big_nohaplotig	CDS	35745592	35745771	.	+	0	Parent=FBgn0033902.1.mrna1;Target=FBgn0033902.1 49 228 +
Chr2	stalkie_big_nohaplotig	CDS	35745832	35746767	.	+	0	Parent=FBgn0033902.1.mrna1;Target=FBgn0033902.1 229 1164 +
Chr2	gffcl	locus	35747236	35747437	.	-	.	ID=RLOC_00016354;geneIDs=comp105633_c0_seq1.path1;transcripts=comp105633_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35747236	35747437	.	-	.	ID=comp105633_c0_seq1.mrna1;geneID=comp105633_c0_seq1.path1;Name=comp105633_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=202;mismatches=0;indels=1;unknowns=0;Target=comp105633_c0_seq1 203 1 .;CDS_Target=comp105633_c0_seq1 56 3 .;locus=RLOC_00016354
Chr2	stalkie_big_nohaplotig	exon	35747236	35747437	99	-	.	Parent=comp105633_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35747383	35747435	.	-	0	Parent=comp105633_c0_seq1.mrna1
Chr2	gffcl	locus	35749337	35749603	.	+	.	ID=RLOC_00016356;geneIDs=FBgn0260222.1.path1;transcripts=FBgn0260222.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35749337	35749603	.	+	.	ID=FBgn0260222.1.mrna1;geneID=FBgn0260222.1.path1;Name=FBgn0260222.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=265;mismatches=0;indels=0;unknowns=2;Target=FBgn0260222.1 267 1 .;locus=RLOC_00016356
Chr2	stalkie_big_nohaplotig	exon	35749337	35749603	100	+	.	Parent=FBgn0260222.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35749337	35749603	.	+	0	Parent=FBgn0260222.1.mrna1
Chr2	gffcl	locus	35749624	35750325	.	+	.	ID=RLOC_00016357;geneIDs=FBgn0050290.1.path1;transcripts=FBgn0050290.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35749624	35750325	.	+	.	ID=FBgn0050290.1.mrna1;geneID=FBgn0050290.1.path1;Name=FBgn0050290.1;Dir=sensecoverage=99.7;identity=100.0;matches=574;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016357
Chr2	stalkie_big_nohaplotig	exon	35749624	35749741	100	+	.	Parent=FBgn0050290.1.mrna1;Target=FBgn0050290.1 3 120 +
Chr2	stalkie_big_nohaplotig	exon	35749799	35750002	100	+	.	Parent=FBgn0050290.1.mrna1;Target=FBgn0050290.1 121 324 +
Chr2	stalkie_big_nohaplotig	exon	35750074	35750325	100	+	.	Parent=FBgn0050290.1.mrna1;Target=FBgn0050290.1 325 576 +
Chr2	stalkie_big_nohaplotig	CDS	35749625	35749741	.	+	0	Parent=FBgn0050290.1.mrna1;Target=FBgn0050290.1 4 120 +
Chr2	stalkie_big_nohaplotig	CDS	35749799	35750002	.	+	0	Parent=FBgn0050290.1.mrna1;Target=FBgn0050290.1 121 324 +
Chr2	stalkie_big_nohaplotig	CDS	35750074	35750325	.	+	0	Parent=FBgn0050290.1.mrna1;Target=FBgn0050290.1 325 576 +
Chr2	gffcl	locus	35749763	35947438	.	.	.	ID=RLOC_00016358;geneIDs=comp116891_c0_seq1.path1,comp116891_c0_seq1.path2;transcripts=comp116891_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35749763	35947438	.	-	.	ID=comp116891_c0_seq1.mrna1;geneID=comp116891_c0_seq1.path1;Name=comp116891_c0_seq1;Dir=indeterminatecoverage=66.9;identity=96.6;matches=821;mismatches=2;indels=27;unknowns=0;Target=comp116891_c0_seq1 281 90 .;locus=RLOC_00016358
Chr2	stalkie_big_nohaplotig	exon	35749763	35749765	100	-	.	Parent=comp116891_c0_seq1.mrna1;Target=comp116891_c0_seq1 837 835 .
Chr2	stalkie_big_nohaplotig	exon	35755487	35755488	100	-	.	Parent=comp116891_c0_seq1.mrna1;Target=comp116891_c0_seq1 834 833 .
Chr2	stalkie_big_nohaplotig	exon	35759130	35759142	84	-	.	Parent=comp116891_c0_seq1.mrna1;Target=comp116891_c0_seq1 832 820 .
Chr2	stalkie_big_nohaplotig	exon	35769924	35769933	100	-	.	Parent=comp116891_c0_seq1.mrna1;Target=comp116891_c0_seq1 804 795 .
Chr2	stalkie_big_nohaplotig	exon	35780057	35780060	100	-	.	Parent=comp116891_c0_seq1.mrna1;Target=comp116891_c0_seq1 794 791 .
Chr2	stalkie_big_nohaplotig	exon	35787969	35787971	100	-	.	Parent=comp116891_c0_seq1.mrna1;Target=comp116891_c0_seq1 790 788 .
Chr2	stalkie_big_nohaplotig	exon	35804231	35804235	100	-	.	Parent=comp116891_c0_seq1.mrna1;Target=comp116891_c0_seq1 787 783 .
Chr2	stalkie_big_nohaplotig	exon	35806005	35806008	100	-	.	Parent=comp116891_c0_seq1.mrna1;Target=comp116891_c0_seq1 782 779 .
Chr2	stalkie_big_nohaplotig	exon	35814196	35814197	100	-	.	Parent=comp116891_c0_seq1.mrna1;Target=comp116891_c0_seq1 778 777 .
Chr2	stalkie_big_nohaplotig	exon	35816579	35816588	100	-	.	Parent=comp116891_c0_seq1.mrna1;Target=comp116891_c0_seq1 776 767 .
Chr2	stalkie_big_nohaplotig	exon	35824155	35824157	100	-	.	Parent=comp116891_c0_seq1.mrna1;Target=comp116891_c0_seq1 766 764 .
Chr2	stalkie_big_nohaplotig	exon	35846596	35846598	100	-	.	Parent=comp116891_c0_seq1.mrna1;Target=comp116891_c0_seq1 763 761 .
Chr2	stalkie_big_nohaplotig	exon	35848782	35848790	100	-	.	Parent=comp116891_c0_seq1.mrna1;Target=comp116891_c0_seq1 760 752 .
Chr2	stalkie_big_nohaplotig	exon	35854747	35854749	100	-	.	Parent=comp116891_c0_seq1.mrna1;Target=comp116891_c0_seq1 751 749 .
Chr2	stalkie_big_nohaplotig	exon	35855204	35855212	100	-	.	Parent=comp116891_c0_seq1.mrna1;Target=comp116891_c0_seq1 748 740 .
Chr2	stalkie_big_nohaplotig	exon	35856050	35856081	15	-	.	Parent=comp116891_c0_seq1.mrna1;Target=comp116891_c0_seq1 739 735 .
Chr2	stalkie_big_nohaplotig	exon	35868575	35868584	100	-	.	Parent=comp116891_c0_seq1.mrna1;Target=comp116891_c0_seq1 734 725 .
Chr2	stalkie_big_nohaplotig	exon	35883443	35883451	100	-	.	Parent=comp116891_c0_seq1.mrna1;Target=comp116891_c0_seq1 724 716 .
Chr2	stalkie_big_nohaplotig	exon	35946724	35947438	100	-	.	Parent=comp116891_c0_seq1.mrna1;Target=comp116891_c0_seq1 715 1 .
Chr2	stalkie_big_nohaplotig	CDS	35947158	35947349	.	-	0	Parent=comp116891_c0_seq1.mrna1
Chr2	gffcl	locus	35766958	35771321	.	+	.	ID=RLOC_00016359;geneIDs=FBgn0024698.1.path1;transcripts=FBgn0024698.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35766958	35771321	.	+	.	ID=FBgn0024698.1.mrna1;geneID=FBgn0024698.1.path1;Name=FBgn0024698.1;Dir=sensecoverage=100.0;identity=99.7;matches=4295;mismatches=13;indels=0;unknowns=0;locus=RLOC_00016359
Chr2	stalkie_big_nohaplotig	exon	35766958	35767869	99	+	.	Parent=FBgn0024698.1.mrna1;Target=FBgn0024698.1 1 912 +
Chr2	stalkie_big_nohaplotig	exon	35767926	35771321	99	+	.	Parent=FBgn0024698.1.mrna1;Target=FBgn0024698.1 913 4308 +
Chr2	stalkie_big_nohaplotig	CDS	35766958	35767869	.	+	0	Parent=FBgn0024698.1.mrna1;Target=FBgn0024698.1 1 912 +
Chr2	stalkie_big_nohaplotig	CDS	35767926	35771321	.	+	0	Parent=FBgn0024698.1.mrna1;Target=FBgn0024698.1 913 4308 +
Chr2	gffcl	locus	35771636	35772948	.	-	.	ID=RLOC_00016360;geneIDs=FBgn0027525.1.path1;transcripts=FBgn0027525.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35771636	35772948	.	-	.	ID=FBgn0027525.1.mrna1;geneID=FBgn0027525.1.path1;Name=FBgn0027525.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1311;mismatches=2;indels=1;unknowns=0;Target=FBgn0027525.1 1314 1 .;CDS_Target=FBgn0027525.1 44 3 .;locus=RLOC_00016360
Chr2	stalkie_big_nohaplotig	exon	35771636	35772948	99	-	.	Parent=FBgn0027525.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35772906	35772946	.	-	0	Parent=FBgn0027525.1.mrna1
Chr2	gffcl	locus	35774567	35778361	.	+	.	ID=RLOC_00016361;geneIDs=FBgn0034585.1.path1;transcripts=FBgn0034585.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35774567	35778361	.	+	.	ID=FBgn0034585.1.mrna1;geneID=FBgn0034585.1.path1;Name=FBgn0034585.1;Dir=sensecoverage=100.0;identity=99.9;matches=1969;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016361
Chr2	stalkie_big_nohaplotig	exon	35774567	35774618	98	+	.	Parent=FBgn0034585.1.mrna1;Target=FBgn0034585.1 1 52 +
Chr2	stalkie_big_nohaplotig	exon	35774679	35774948	100	+	.	Parent=FBgn0034585.1.mrna1;Target=FBgn0034585.1 53 322 +
Chr2	stalkie_big_nohaplotig	exon	35775029	35775327	99	+	.	Parent=FBgn0034585.1.mrna1;Target=FBgn0034585.1 323 621 +
Chr2	stalkie_big_nohaplotig	exon	35775387	35776210	100	+	.	Parent=FBgn0034585.1.mrna1;Target=FBgn0034585.1 622 1445 +
Chr2	stalkie_big_nohaplotig	exon	35776592	35776727	100	+	.	Parent=FBgn0034585.1.mrna1;Target=FBgn0034585.1 1446 1581 +
Chr2	stalkie_big_nohaplotig	exon	35777902	35778018	100	+	.	Parent=FBgn0034585.1.mrna1;Target=FBgn0034585.1 1582 1698 +
Chr2	stalkie_big_nohaplotig	exon	35778089	35778361	100	+	.	Parent=FBgn0034585.1.mrna1;Target=FBgn0034585.1 1699 1971 +
Chr2	stalkie_big_nohaplotig	CDS	35774567	35774618	.	+	0	Parent=FBgn0034585.1.mrna1;Target=FBgn0034585.1 1 52 +
Chr2	stalkie_big_nohaplotig	CDS	35774679	35774948	.	+	2	Parent=FBgn0034585.1.mrna1;Target=FBgn0034585.1 53 322 +
Chr2	stalkie_big_nohaplotig	CDS	35775029	35775327	.	+	2	Parent=FBgn0034585.1.mrna1;Target=FBgn0034585.1 323 621 +
Chr2	stalkie_big_nohaplotig	CDS	35775387	35776210	.	+	0	Parent=FBgn0034585.1.mrna1;Target=FBgn0034585.1 622 1445 +
Chr2	stalkie_big_nohaplotig	CDS	35776592	35776727	.	+	1	Parent=FBgn0034585.1.mrna1;Target=FBgn0034585.1 1446 1581 +
Chr2	stalkie_big_nohaplotig	CDS	35777902	35778018	.	+	0	Parent=FBgn0034585.1.mrna1;Target=FBgn0034585.1 1582 1698 +
Chr2	stalkie_big_nohaplotig	CDS	35778089	35778361	.	+	0	Parent=FBgn0034585.1.mrna1;Target=FBgn0034585.1 1699 1971 +
Chr2	gffcl	locus	35779026	35785830	.	-	.	ID=RLOC_00016362;geneIDs=FBgn0003748.1.path1,comp151550_c0_seq1.path1;transcripts=FBgn0003748.1.mrna1,comp151550_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35779026	35785830	.	-	.	ID=FBgn0003748.1.mrna1;geneID=FBgn0003748.1.path1;Name=FBgn0003748.1;Dir=sensecoverage=100.0;identity=99.8;matches=1860;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016362
Chr2	stalkie_big_nohaplotig	exon	35779026	35779102	100	-	.	Parent=FBgn0003748.1.mrna1;Target=FBgn0003748.1 1787 1863 +
Chr2	stalkie_big_nohaplotig	exon	35780147	35780285	100	-	.	Parent=FBgn0003748.1.mrna1;Target=FBgn0003748.1 1648 1786 +
Chr2	stalkie_big_nohaplotig	exon	35780364	35780762	99	-	.	Parent=FBgn0003748.1.mrna1;Target=FBgn0003748.1 1249 1647 +
Chr2	stalkie_big_nohaplotig	exon	35782295	35783173	99	-	.	Parent=FBgn0003748.1.mrna1;Target=FBgn0003748.1 370 1248 +
Chr2	stalkie_big_nohaplotig	exon	35783246	35783429	100	-	.	Parent=FBgn0003748.1.mrna1;Target=FBgn0003748.1 186 369 +
Chr2	stalkie_big_nohaplotig	exon	35785646	35785830	100	-	.	Parent=FBgn0003748.1.mrna1;Target=FBgn0003748.1 1 185 +
Chr2	stalkie_big_nohaplotig	CDS	35779026	35779102	.	-	2	Parent=FBgn0003748.1.mrna1;Target=FBgn0003748.1 1787 1863 +
Chr2	stalkie_big_nohaplotig	CDS	35780147	35780285	.	-	0	Parent=FBgn0003748.1.mrna1;Target=FBgn0003748.1 1648 1786 +
Chr2	stalkie_big_nohaplotig	CDS	35780364	35780762	.	-	0	Parent=FBgn0003748.1.mrna1;Target=FBgn0003748.1 1249 1647 +
Chr2	stalkie_big_nohaplotig	CDS	35782295	35783173	.	-	0	Parent=FBgn0003748.1.mrna1;Target=FBgn0003748.1 370 1248 +
Chr2	stalkie_big_nohaplotig	CDS	35783246	35783429	.	-	1	Parent=FBgn0003748.1.mrna1;Target=FBgn0003748.1 186 369 +
Chr2	stalkie_big_nohaplotig	CDS	35785646	35785830	.	-	0	Parent=FBgn0003748.1.mrna1;Target=FBgn0003748.1 1 185 +
Chr2	stalkie_big_nohaplotig	mRNA	35780742	35781671	.	-	.	ID=comp151550_c0_seq1.mrna1;geneID=comp151550_c0_seq1.path1;Name=comp151550_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=914;mismatches=0;indels=0;unknowns=0;Target=comp151550_c0_seq1 602 423 .;locus=RLOC_00016362
Chr2	stalkie_big_nohaplotig	exon	35780742	35780862	100	-	.	Parent=comp151550_c0_seq1.mrna1;Target=comp151550_c0_seq1 914 794 .
Chr2	stalkie_big_nohaplotig	exon	35780879	35781671	100	-	.	Parent=comp151550_c0_seq1.mrna1;Target=comp151550_c0_seq1 793 1 .
Chr2	stalkie_big_nohaplotig	CDS	35781070	35781249	.	-	0	Parent=comp151550_c0_seq1.mrna1
Chr2	gffcl	locus	35785883	35786452	.	+	.	ID=RLOC_00016363;geneIDs=comp146444_c0_seq1.path1;transcripts=comp146444_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35785883	35786452	.	+	.	ID=comp146444_c0_seq1.mrna1;geneID=comp146444_c0_seq1.path1;Name=comp146444_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=569;mismatches=1;indels=0;unknowns=0;Target=comp146444_c0_seq1 570 1 .;CDS_Target=comp146444_c0_seq1 149 3 .;locus=RLOC_00016363
Chr2	stalkie_big_nohaplotig	exon	35785883	35786452	99	+	.	Parent=comp146444_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35785885	35786031	.	+	0	Parent=comp146444_c0_seq1.mrna1
Chr2	gffcl	locus	35786644	35787329	.	-	.	ID=RLOC_00016364;geneIDs=comp136127_c0_seq1.path1;transcripts=comp136127_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35786644	35787329	.	-	.	ID=comp136127_c0_seq1.mrna1;geneID=comp136127_c0_seq1.path1;Name=comp136127_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=682;mismatches=4;indels=0;unknowns=0;Target=comp136127_c0_seq1 686 1 .;CDS_Target=comp136127_c0_seq1 485 384 .;locus=RLOC_00016364
Chr2	stalkie_big_nohaplotig	exon	35786644	35787329	99	-	.	Parent=comp136127_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35786845	35786946	.	-	0	Parent=comp136127_c0_seq1.mrna1
Chr2	gffcl	locus	35826155	35836112	.	+	.	ID=RLOC_00016365;geneIDs=FBgn0034583.1.path1;transcripts=FBgn0034583.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35826155	35836112	.	+	.	ID=FBgn0034583.1.mrna1;geneID=FBgn0034583.1.path1;Name=FBgn0034583.1;Dir=sensecoverage=100.0;identity=99.9;matches=920;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016365
Chr2	stalkie_big_nohaplotig	exon	35826155	35826188	97	+	.	Parent=FBgn0034583.1.mrna1;Target=FBgn0034583.1 1 34 +
Chr2	stalkie_big_nohaplotig	exon	35835162	35835563	100	+	.	Parent=FBgn0034583.1.mrna1;Target=FBgn0034583.1 35 436 +
Chr2	stalkie_big_nohaplotig	exon	35835628	35836112	100	+	.	Parent=FBgn0034583.1.mrna1;Target=FBgn0034583.1 437 921 +
Chr2	stalkie_big_nohaplotig	CDS	35826155	35826188	.	+	0	Parent=FBgn0034583.1.mrna1;Target=FBgn0034583.1 1 34 +
Chr2	stalkie_big_nohaplotig	CDS	35835162	35835563	.	+	2	Parent=FBgn0034583.1.mrna1;Target=FBgn0034583.1 35 436 +
Chr2	stalkie_big_nohaplotig	CDS	35835628	35836112	.	+	2	Parent=FBgn0034583.1.mrna1;Target=FBgn0034583.1 437 921 +
Chr2	gffcl	locus	35828908	35829736	.	-	.	ID=RLOC_00016366;geneIDs=comp158223_c0_seq1.path1;transcripts=comp158223_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35828908	35829736	.	-	.	ID=comp158223_c0_seq1.mrna1;geneID=comp158223_c0_seq1.path1;Name=comp158223_c0_seq1;Dir=indeterminatecoverage=94.3;identity=94.2;matches=782;mismatches=5;indels=43;unknowns=0;Target=comp158223_c0_seq1 797 10 .;CDS_Target=comp158223_c0_seq1 152 12 .;locus=RLOC_00016366
Chr2	stalkie_big_nohaplotig	exon	35828908	35829736	94	-	.	Parent=comp158223_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35829594	35829734	.	-	0	Parent=comp158223_c0_seq1.mrna1
Chr2	gffcl	locus	35831760	35832098	.	+	.	ID=RLOC_00016367;geneIDs=comp145184_c0_seq1.path1;transcripts=comp145184_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35831760	35832098	.	+	.	ID=comp145184_c0_seq1.mrna1;geneID=comp145184_c0_seq1.path1;Name=comp145184_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=339;mismatches=0;indels=0;unknowns=0;Target=comp145184_c0_seq1 339 1 .;CDS_Target=comp145184_c0_seq1 325 242 .;locus=RLOC_00016367
Chr2	stalkie_big_nohaplotig	exon	35831760	35832098	100	+	.	Parent=comp145184_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35832001	35832084	.	+	0	Parent=comp145184_c0_seq1.mrna1
Chr2	gffcl	locus	35841209	35878441	.	.	.	ID=RLOC_00016368;geneIDs=comp147415_c0_seq1.path1,comp150977_c1_seq1.path1;transcripts=comp150977_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35842109	35878441	.	-	.	ID=comp150977_c1_seq1.mrna1;geneID=comp150977_c1_seq1.path1;Name=comp150977_c1_seq1;Dir=indeterminatecoverage=75.2;identity=84.3;matches=479;mismatches=21;indels=68;unknowns=0;Target=comp150977_c1_seq1 543 472 .;locus=RLOC_00016368
Chr2	stalkie_big_nohaplotig	exon	35842109	35842507	97	-	.	Parent=comp150977_c1_seq1.mrna1;Target=comp150977_c1_seq1 768 370 .
Chr2	stalkie_big_nohaplotig	exon	35846892	35846894	100	-	.	Parent=comp150977_c1_seq1.mrna1;Target=comp150977_c1_seq1 369 367 .
Chr2	stalkie_big_nohaplotig	exon	35852422	35852451	34	-	.	Parent=comp150977_c1_seq1.mrna1;Target=comp150977_c1_seq1 366 298 .
Chr2	stalkie_big_nohaplotig	exon	35855146	35855157	91	-	.	Parent=comp150977_c1_seq1.mrna1;Target=comp150977_c1_seq1 297 286 .
Chr2	stalkie_big_nohaplotig	exon	35858419	35858420	100	-	.	Parent=comp150977_c1_seq1.mrna1;Target=comp150977_c1_seq1 284 283 .
Chr2	stalkie_big_nohaplotig	exon	35867474	35867480	100	-	.	Parent=comp150977_c1_seq1.mrna1;Target=comp150977_c1_seq1 282 276 .
Chr2	stalkie_big_nohaplotig	exon	35874958	35874961	100	-	.	Parent=comp150977_c1_seq1.mrna1;Target=comp150977_c1_seq1 275 272 .
Chr2	stalkie_big_nohaplotig	exon	35875729	35875735	100	-	.	Parent=comp150977_c1_seq1.mrna1;Target=comp150977_c1_seq1 271 265 .
Chr2	stalkie_big_nohaplotig	exon	35878406	35878441	46	-	.	Parent=comp150977_c1_seq1.mrna1;Target=comp150977_c1_seq1 235 171 .
Chr2	stalkie_big_nohaplotig	CDS	35842334	35842405	.	-	0	Parent=comp150977_c1_seq1.mrna1
Chr2	gffcl	locus	35842547	35888481	.	-	.	ID=RLOC_00016369;geneIDs=FBgn0033739.1.path1,comp150437_c0_seq1.path1,comp162552_c0_seq1.path1;transcripts=comp162552_c0_seq1.mrna1,FBgn0033739.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35842997	35888481	.	-	.	ID=comp162552_c0_seq1.mrna1;geneID=comp162552_c0_seq1.path1;Name=comp162552_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=4389;mismatches=12;indels=10;unknowns=0;locus=RLOC_00016369
Chr2	stalkie_big_nohaplotig	exon	35842997	35844059	99	-	.	Parent=comp162552_c0_seq1.mrna1;Target=comp162552_c0_seq1 1 1061 -
Chr2	stalkie_big_nohaplotig	exon	35844463	35844506	100	-	.	Parent=comp162552_c0_seq1.mrna1;Target=comp162552_c0_seq1 1062 1105 -
Chr2	stalkie_big_nohaplotig	exon	35847230	35848010	98	-	.	Parent=comp162552_c0_seq1.mrna1;Target=comp162552_c0_seq1 1106 1880 -
Chr2	stalkie_big_nohaplotig	exon	35848399	35848488	100	-	.	Parent=comp162552_c0_seq1.mrna1;Target=comp162552_c0_seq1 1881 1970 -
Chr2	stalkie_big_nohaplotig	exon	35850834	35851461	99	-	.	Parent=comp162552_c0_seq1.mrna1;Target=comp162552_c0_seq1 1971 2598 -
Chr2	stalkie_big_nohaplotig	exon	35851581	35852383	99	-	.	Parent=comp162552_c0_seq1.mrna1;Target=comp162552_c0_seq1 2599 3401 -
Chr2	stalkie_big_nohaplotig	exon	35852487	35852572	100	-	.	Parent=comp162552_c0_seq1.mrna1;Target=comp162552_c0_seq1 3402 3487 -
Chr2	stalkie_big_nohaplotig	exon	35852642	35853024	100	-	.	Parent=comp162552_c0_seq1.mrna1;Target=comp162552_c0_seq1 3488 3870 -
Chr2	stalkie_big_nohaplotig	exon	35870674	35870712	100	-	.	Parent=comp162552_c0_seq1.mrna1;Target=comp162552_c0_seq1 3871 3909 -
Chr2	stalkie_big_nohaplotig	exon	35887989	35888481	99	-	.	Parent=comp162552_c0_seq1.mrna1;Target=comp162552_c0_seq1 3910 4402 -
Chr2	stalkie_big_nohaplotig	CDS	35847952	35848010	.	-	2	Parent=comp162552_c0_seq1.mrna1;Target=comp162552_c0_seq1 1822 1880 .
Chr2	stalkie_big_nohaplotig	CDS	35848399	35848488	.	-	2	Parent=comp162552_c0_seq1.mrna1;Target=comp162552_c0_seq1 1881 1970 .
Chr2	stalkie_big_nohaplotig	CDS	35850834	35851461	.	-	0	Parent=comp162552_c0_seq1.mrna1;Target=comp162552_c0_seq1 1971 2598 .
Chr2	stalkie_big_nohaplotig	CDS	35851581	35852383	.	-	2	Parent=comp162552_c0_seq1.mrna1;Target=comp162552_c0_seq1 2599 3401 .
Chr2	stalkie_big_nohaplotig	CDS	35852487	35852572	.	-	1	Parent=comp162552_c0_seq1.mrna1;Target=comp162552_c0_seq1 3402 3487 .
Chr2	stalkie_big_nohaplotig	CDS	35852642	35852991	.	-	0	Parent=comp162552_c0_seq1.mrna1;Target=comp162552_c0_seq1 3488 3837 .
Chr2	stalkie_big_nohaplotig	mRNA	35847259	35852991	.	-	.	ID=FBgn0033739.1.mrna1;geneID=FBgn0033739.1.path1;Name=FBgn0033739.1;Dir=sensecoverage=100.0;identity=99.6;matches=2260;mismatches=8;indels=0;unknowns=0;locus=RLOC_00016369
Chr2	stalkie_big_nohaplotig	exon	35847259	35847524	100	-	.	Parent=FBgn0033739.1.mrna1;Target=FBgn0033739.1 2003 2268 +
Chr2	stalkie_big_nohaplotig	exon	35847966	35848010	100	-	.	Parent=FBgn0033739.1.mrna1;Target=FBgn0033739.1 1958 2002 +
Chr2	stalkie_big_nohaplotig	exon	35848399	35848488	100	-	.	Parent=FBgn0033739.1.mrna1;Target=FBgn0033739.1 1868 1957 +
Chr2	stalkie_big_nohaplotig	exon	35850834	35851461	99	-	.	Parent=FBgn0033739.1.mrna1;Target=FBgn0033739.1 1240 1867 +
Chr2	stalkie_big_nohaplotig	exon	35851581	35852383	99	-	.	Parent=FBgn0033739.1.mrna1;Target=FBgn0033739.1 437 1239 +
Chr2	stalkie_big_nohaplotig	exon	35852487	35852572	100	-	.	Parent=FBgn0033739.1.mrna1;Target=FBgn0033739.1 351 436 +
Chr2	stalkie_big_nohaplotig	exon	35852642	35852991	100	-	.	Parent=FBgn0033739.1.mrna1;Target=FBgn0033739.1 1 350 +
Chr2	stalkie_big_nohaplotig	CDS	35847259	35847524	.	-	2	Parent=FBgn0033739.1.mrna1;Target=FBgn0033739.1 2003 2268 +
Chr2	stalkie_big_nohaplotig	CDS	35847966	35848010	.	-	2	Parent=FBgn0033739.1.mrna1;Target=FBgn0033739.1 1958 2002 +
Chr2	stalkie_big_nohaplotig	CDS	35848399	35848488	.	-	2	Parent=FBgn0033739.1.mrna1;Target=FBgn0033739.1 1868 1957 +
Chr2	stalkie_big_nohaplotig	CDS	35850834	35851461	.	-	0	Parent=FBgn0033739.1.mrna1;Target=FBgn0033739.1 1240 1867 +
Chr2	stalkie_big_nohaplotig	CDS	35851581	35852383	.	-	2	Parent=FBgn0033739.1.mrna1;Target=FBgn0033739.1 437 1239 +
Chr2	stalkie_big_nohaplotig	CDS	35852487	35852572	.	-	1	Parent=FBgn0033739.1.mrna1;Target=FBgn0033739.1 351 436 +
Chr2	stalkie_big_nohaplotig	CDS	35852642	35852991	.	-	0	Parent=FBgn0033739.1.mrna1;Target=FBgn0033739.1 1 350 +
Chr2	gffcl	locus	35845579	35846370	.	-	.	ID=RLOC_00016370;geneIDs=comp157545_c0_seq1.path1;transcripts=comp157545_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35845579	35846370	.	-	.	ID=comp157545_c0_seq1.mrna1;geneID=comp157545_c0_seq1.path1;Name=comp157545_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=785;mismatches=7;indels=0;unknowns=0;Target=comp157545_c0_seq1 792 1 .;CDS_Target=comp157545_c0_seq1 792 664 .;locus=RLOC_00016370
Chr2	stalkie_big_nohaplotig	exon	35845579	35846370	99	-	.	Parent=comp157545_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35845579	35845707	.	-	0	Parent=comp157545_c0_seq1.mrna1
Chr2	gffcl	locus	35850215	35850602	.	-	.	ID=RLOC_00016371;geneIDs=comp145374_c0_seq1.path1;transcripts=comp145374_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35850215	35850602	.	-	.	ID=comp145374_c0_seq1.mrna1;geneID=comp145374_c0_seq1.path1;Name=comp145374_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.0;matches=383;mismatches=5;indels=15;unknowns=0;Target=comp145374_c0_seq1 403 1 .;CDS_Target=comp145374_c0_seq1 132 88 .;locus=RLOC_00016371
Chr2	stalkie_big_nohaplotig	exon	35850215	35850602	95	-	.	Parent=comp145374_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35850479	35850515	.	-	0	Parent=comp145374_c0_seq1.mrna1
Chr2	gffcl	locus	35893561	35893985	.	+	.	ID=RLOC_00016372;geneIDs=FBgn0024196.1.path1;transcripts=FBgn0024196.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35893561	35893985	.	+	.	ID=FBgn0024196.1.mrna1;geneID=FBgn0024196.1.path1;Name=FBgn0024196.1;Dir=sensecoverage=100.0;identity=99.7;matches=305;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016372
Chr2	stalkie_big_nohaplotig	exon	35893561	35893578	100	+	.	Parent=FBgn0024196.1.mrna1;Target=FBgn0024196.1 1 18 +
Chr2	stalkie_big_nohaplotig	exon	35893637	35893715	100	+	.	Parent=FBgn0024196.1.mrna1;Target=FBgn0024196.1 19 97 +
Chr2	stalkie_big_nohaplotig	exon	35893777	35893985	99	+	.	Parent=FBgn0024196.1.mrna1;Target=FBgn0024196.1 98 306 +
Chr2	stalkie_big_nohaplotig	CDS	35893561	35893578	.	+	0	Parent=FBgn0024196.1.mrna1;Target=FBgn0024196.1 1 18 +
Chr2	stalkie_big_nohaplotig	CDS	35893637	35893715	.	+	0	Parent=FBgn0024196.1.mrna1;Target=FBgn0024196.1 19 97 +
Chr2	stalkie_big_nohaplotig	CDS	35893777	35893985	.	+	2	Parent=FBgn0024196.1.mrna1;Target=FBgn0024196.1 98 306 +
Chr2	gffcl	locus	35898050	35906492	.	+	.	ID=RLOC_00016373;geneIDs=comp150801_c0_seq1.path1;transcripts=comp150801_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35898050	35906492	.	+	.	ID=comp150801_c0_seq1.mrna1;geneID=comp150801_c0_seq1.path1;Name=comp150801_c0_seq1;Dir=antisensecoverage=97.1;identity=99.4;matches=1444;mismatches=2;indels=6;unknowns=0;Target=comp150801_c0_seq1 1352 1462 .;locus=RLOC_00016373
Chr2	stalkie_big_nohaplotig	exon	35898050	35898677	99	+	.	Parent=comp150801_c0_seq1.mrna1;Target=comp150801_c0_seq1 839 1464 -
Chr2	stalkie_big_nohaplotig	exon	35905673	35906492	99	+	.	Parent=comp150801_c0_seq1.mrna1;Target=comp150801_c0_seq1 15 838 -
Chr2	stalkie_big_nohaplotig	CDS	35898052	35898162	.	+	0	Parent=comp150801_c0_seq1.mrna1
Chr2	gffcl	locus	35913454	35940047	.	-	.	ID=RLOC_00016374;geneIDs=FBgn0034223.1.path1;transcripts=FBgn0034223.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35913454	35940047	.	-	.	ID=FBgn0034223.1.mrna1;geneID=FBgn0034223.1.path1;Name=FBgn0034223.1;Dir=sensecoverage=100.0;identity=99.5;matches=2505;mismatches=12;indels=0;unknowns=0;locus=RLOC_00016374
Chr2	stalkie_big_nohaplotig	exon	35913454	35914061	98	-	.	Parent=FBgn0034223.1.mrna1;Target=FBgn0034223.1 1910 2517 +
Chr2	stalkie_big_nohaplotig	exon	35914124	35915043	99	-	.	Parent=FBgn0034223.1.mrna1;Target=FBgn0034223.1 990 1909 +
Chr2	stalkie_big_nohaplotig	exon	35938954	35938985	100	-	.	Parent=FBgn0034223.1.mrna1;Target=FBgn0034223.1 958 989 +
Chr2	stalkie_big_nohaplotig	exon	35939038	35939693	99	-	.	Parent=FBgn0034223.1.mrna1;Target=FBgn0034223.1 302 957 +
Chr2	stalkie_big_nohaplotig	exon	35939747	35940047	100	-	.	Parent=FBgn0034223.1.mrna1;Target=FBgn0034223.1 1 301 +
Chr2	stalkie_big_nohaplotig	CDS	35913454	35914061	.	-	2	Parent=FBgn0034223.1.mrna1;Target=FBgn0034223.1 1910 2517 +
Chr2	stalkie_big_nohaplotig	CDS	35914124	35915043	.	-	1	Parent=FBgn0034223.1.mrna1;Target=FBgn0034223.1 990 1909 +
Chr2	stalkie_big_nohaplotig	CDS	35938954	35938985	.	-	0	Parent=FBgn0034223.1.mrna1;Target=FBgn0034223.1 958 989 +
Chr2	stalkie_big_nohaplotig	CDS	35939038	35939693	.	-	2	Parent=FBgn0034223.1.mrna1;Target=FBgn0034223.1 302 957 +
Chr2	stalkie_big_nohaplotig	CDS	35939747	35940047	.	-	0	Parent=FBgn0034223.1.mrna1;Target=FBgn0034223.1 1 301 +
Chr2	gffcl	locus	35922879	35923499	.	+	.	ID=RLOC_00016375;geneIDs=comp135593_c0_seq1.path1;transcripts=comp135593_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35922879	35923499	.	+	.	ID=comp135593_c0_seq1.mrna1;geneID=comp135593_c0_seq1.path1;Name=comp135593_c0_seq1;Dir=indeterminatecoverage=95.7;identity=99.7;matches=620;mismatches=1;indels=1;unknowns=0;Target=comp135593_c0_seq1 650 29 .;CDS_Target=comp135593_c0_seq1 649 422 .;locus=RLOC_00016375
Chr2	stalkie_big_nohaplotig	exon	35922879	35923499	99	+	.	Parent=comp135593_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35923271	35923498	.	+	0	Parent=comp135593_c0_seq1.mrna1
Chr2	gffcl	locus	35930494	35931903	.	+	.	ID=RLOC_00016376;geneIDs=FBgn0028953.1.path1;transcripts=FBgn0028953.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35930494	35931903	.	+	.	ID=FBgn0028953.1.mrna1;geneID=FBgn0028953.1.path1;Name=FBgn0028953.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1410;mismatches=0;indels=0;unknowns=0;Target=FBgn0028953.1 1410 1 .;locus=RLOC_00016376
Chr2	stalkie_big_nohaplotig	exon	35930494	35931903	100	+	.	Parent=FBgn0028953.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35930494	35931903	.	+	0	Parent=FBgn0028953.1.mrna1
Chr2	gffcl	locus	35966265	35967889	.	-	.	ID=RLOC_00016379;geneIDs=FBgn0022984.3.path1;transcripts=FBgn0022984.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35966265	35967889	.	-	.	ID=FBgn0022984.3.mrna1;geneID=FBgn0022984.3.path1;Name=FBgn0022984.3;Dir=sensecoverage=100.0;identity=99.8;matches=991;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016379
Chr2	stalkie_big_nohaplotig	exon	35966265	35966395	100	-	.	Parent=FBgn0022984.3.mrna1;Target=FBgn0022984.3 863 993 +
Chr2	stalkie_big_nohaplotig	exon	35966551	35966630	100	-	.	Parent=FBgn0022984.3.mrna1;Target=FBgn0022984.3 783 862 +
Chr2	stalkie_big_nohaplotig	exon	35966706	35966801	100	-	.	Parent=FBgn0022984.3.mrna1;Target=FBgn0022984.3 687 782 +
Chr2	stalkie_big_nohaplotig	exon	35966873	35967237	99	-	.	Parent=FBgn0022984.3.mrna1;Target=FBgn0022984.3 322 686 +
Chr2	stalkie_big_nohaplotig	exon	35967303	35967424	100	-	.	Parent=FBgn0022984.3.mrna1;Target=FBgn0022984.3 200 321 +
Chr2	stalkie_big_nohaplotig	exon	35967691	35967889	100	-	.	Parent=FBgn0022984.3.mrna1;Target=FBgn0022984.3 1 199 +
Chr2	stalkie_big_nohaplotig	CDS	35966265	35966395	.	-	2	Parent=FBgn0022984.3.mrna1;Target=FBgn0022984.3 863 993 +
Chr2	stalkie_big_nohaplotig	CDS	35966551	35966630	.	-	1	Parent=FBgn0022984.3.mrna1;Target=FBgn0022984.3 783 862 +
Chr2	stalkie_big_nohaplotig	CDS	35966706	35966801	.	-	1	Parent=FBgn0022984.3.mrna1;Target=FBgn0022984.3 687 782 +
Chr2	stalkie_big_nohaplotig	CDS	35966873	35967237	.	-	0	Parent=FBgn0022984.3.mrna1;Target=FBgn0022984.3 322 686 +
Chr2	stalkie_big_nohaplotig	CDS	35967303	35967424	.	-	2	Parent=FBgn0022984.3.mrna1;Target=FBgn0022984.3 200 321 +
Chr2	stalkie_big_nohaplotig	CDS	35967691	35967889	.	-	0	Parent=FBgn0022984.3.mrna1;Target=FBgn0022984.3 1 199 +
Chr2	gffcl	locus	35972000	35973826	.	-	.	ID=RLOC_00016380;geneIDs=FBgn0022984.2.path1;transcripts=FBgn0022984.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35972000	35973826	.	-	.	ID=FBgn0022984.2.mrna1;geneID=FBgn0022984.2.path1;Name=FBgn0022984.2;Dir=sensecoverage=100.0;identity=99.4;matches=999;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016380
Chr2	stalkie_big_nohaplotig	exon	35972000	35972130	100	-	.	Parent=FBgn0022984.2.mrna1;Target=FBgn0022984.2 875 1005 +
Chr2	stalkie_big_nohaplotig	exon	35972251	35972330	100	-	.	Parent=FBgn0022984.2.mrna1;Target=FBgn0022984.2 795 874 +
Chr2	stalkie_big_nohaplotig	exon	35972537	35972632	100	-	.	Parent=FBgn0022984.2.mrna1;Target=FBgn0022984.2 699 794 +
Chr2	stalkie_big_nohaplotig	exon	35972688	35973052	98	-	.	Parent=FBgn0022984.2.mrna1;Target=FBgn0022984.2 334 698 +
Chr2	stalkie_big_nohaplotig	exon	35973118	35973239	100	-	.	Parent=FBgn0022984.2.mrna1;Target=FBgn0022984.2 212 333 +
Chr2	stalkie_big_nohaplotig	exon	35973616	35973826	99	-	.	Parent=FBgn0022984.2.mrna1;Target=FBgn0022984.2 1 211 +
Chr2	stalkie_big_nohaplotig	CDS	35972000	35972130	.	-	2	Parent=FBgn0022984.2.mrna1;Target=FBgn0022984.2 875 1005 +
Chr2	stalkie_big_nohaplotig	CDS	35972251	35972330	.	-	1	Parent=FBgn0022984.2.mrna1;Target=FBgn0022984.2 795 874 +
Chr2	stalkie_big_nohaplotig	CDS	35972537	35972632	.	-	1	Parent=FBgn0022984.2.mrna1;Target=FBgn0022984.2 699 794 +
Chr2	stalkie_big_nohaplotig	CDS	35972688	35973052	.	-	0	Parent=FBgn0022984.2.mrna1;Target=FBgn0022984.2 334 698 +
Chr2	stalkie_big_nohaplotig	CDS	35973118	35973239	.	-	2	Parent=FBgn0022984.2.mrna1;Target=FBgn0022984.2 212 333 +
Chr2	stalkie_big_nohaplotig	CDS	35973616	35973826	.	-	0	Parent=FBgn0022984.2.mrna1;Target=FBgn0022984.2 1 211 +
Chr2	gffcl	locus	35975329	35975955	.	+	.	ID=RLOC_00016381;geneIDs=FBgn0034726.1.path1;transcripts=FBgn0034726.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35975329	35975955	.	+	.	ID=FBgn0034726.1.mrna1;geneID=FBgn0034726.1.path1;Name=FBgn0034726.1;Dir=sensecoverage=100.0;identity=99.8;matches=563;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016381
Chr2	stalkie_big_nohaplotig	exon	35975329	35975608	99	+	.	Parent=FBgn0034726.1.mrna1;Target=FBgn0034726.1 1 280 +
Chr2	stalkie_big_nohaplotig	exon	35975672	35975955	100	+	.	Parent=FBgn0034726.1.mrna1;Target=FBgn0034726.1 281 564 +
Chr2	stalkie_big_nohaplotig	CDS	35975329	35975608	.	+	0	Parent=FBgn0034726.1.mrna1;Target=FBgn0034726.1 1 280 +
Chr2	stalkie_big_nohaplotig	CDS	35975672	35975955	.	+	2	Parent=FBgn0034726.1.mrna1;Target=FBgn0034726.1 281 564 +
Chr2	gffcl	locus	35977632	35978274	.	-	.	ID=RLOC_00016382;geneIDs=comp145654_c0_seq1.path1;transcripts=comp145654_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35977632	35978274	.	-	.	ID=comp145654_c0_seq1.mrna1;geneID=comp145654_c0_seq1.path1;Name=comp145654_c0_seq1;Dir=indeterminatecoverage=74.3;identity=96.6;matches=623;mismatches=8;indels=14;unknowns=0;Target=comp145654_c0_seq1 852 220 .;CDS_Target=comp145654_c0_seq1 509 405 .;locus=RLOC_00016382
Chr2	stalkie_big_nohaplotig	exon	35977632	35978274	96	-	.	Parent=comp145654_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35977975	35978079	.	-	0	Parent=comp145654_c0_seq1.mrna1
Chr2	gffcl	locus	35978317	35978971	.	-	.	ID=RLOC_00016383;geneIDs=comp154798_c1_seq1.path1;transcripts=comp154798_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35978317	35978971	.	-	.	ID=comp154798_c1_seq1.mrna1;geneID=comp154798_c1_seq1.path1;Name=comp154798_c1_seq1;Dir=indeterminatecoverage=100.0;identity=95.1;matches=634;mismatches=17;indels=16;unknowns=0;Target=comp154798_c1_seq1 663 1 .;CDS_Target=comp154798_c1_seq1 467 369 .;locus=RLOC_00016383
Chr2	stalkie_big_nohaplotig	exon	35978317	35978971	95	-	.	Parent=comp154798_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35978517	35978615	.	-	0	Parent=comp154798_c1_seq1.mrna1
Chr2	gffcl	locus	35988878	35989398	.	-	.	ID=RLOC_00016386;geneIDs=comp147920_c2_seq1.path1;transcripts=comp147920_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35988878	35989398	.	-	.	ID=comp147920_c2_seq1.mrna1;geneID=comp147920_c2_seq1.path1;Name=comp147920_c2_seq1;Dir=indeterminatecoverage=99.2;identity=99.8;matches=520;mismatches=1;indels=0;unknowns=0;Target=comp147920_c2_seq1 521 1 .;CDS_Target=comp147920_c2_seq1 32 3 .;locus=RLOC_00016386
Chr2	stalkie_big_nohaplotig	exon	35988878	35989398	99	-	.	Parent=comp147920_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	35989367	35989396	.	-	0	Parent=comp147920_c2_seq1.mrna1
Chr2	gffcl	locus	35989651	35989712	.	+	.	ID=RLOC_00016387;geneIDs=comp135047_c0_seq1.path2;transcripts=comp135047_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	35989651	35989712	.	+	.	ID=comp135047_c0_seq1.mrna2;geneID=comp135047_c0_seq1.path2;Name=comp135047_c0_seq1;Dir=indeterminatecoverage=7.9;identity=100.0;matches=62;mismatches=0;indels=0;unknowns=0;Target=comp135047_c0_seq1 765 704 .;locus=RLOC_00016387
Chr2	stalkie_big_nohaplotig	exon	35989651	35989712	100	+	.	Parent=comp135047_c0_seq1.mrna2
Chr2	gffcl	locus	35991322	36191489	.	+	.	ID=RLOC_00016388;geneIDs=FBgn0034728.1.path1;transcripts=FBgn0034728.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	35991322	36191489	.	+	.	ID=FBgn0034728.1.mrna1;geneID=FBgn0034728.1.path1;Name=FBgn0034728.1;Dir=sensecoverage=90.4;identity=99.4;matches=3120;mismatches=16;indels=3;unknowns=0;locus=RLOC_00016388
Chr2	stalkie_big_nohaplotig	exon	35991322	35991405	96	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 1 84 +
Chr2	stalkie_big_nohaplotig	exon	35991457	35991841	99	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 85 469 +
Chr2	stalkie_big_nohaplotig	exon	35991908	35992093	99	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 470 655 +
Chr2	stalkie_big_nohaplotig	exon	35992152	35992365	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 656 869 +
Chr2	stalkie_big_nohaplotig	exon	35992497	35993675	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 870 2048 +
Chr2	stalkie_big_nohaplotig	exon	35994910	35994976	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 2049 2115 +
Chr2	stalkie_big_nohaplotig	exon	35995032	35995388	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 2116 2472 +
Chr2	stalkie_big_nohaplotig	exon	35995474	35995649	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 2473 2648 +
Chr2	stalkie_big_nohaplotig	exon	35995730	35995982	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 2649 2901 +
Chr2	stalkie_big_nohaplotig	exon	36000947	36000954	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 2902 2909 +
Chr2	stalkie_big_nohaplotig	exon	36013350	36013354	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 2910 2914 +
Chr2	stalkie_big_nohaplotig	exon	36014044	36014051	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 2915 2922 +
Chr2	stalkie_big_nohaplotig	exon	36016564	36016567	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 2923 2926 +
Chr2	stalkie_big_nohaplotig	exon	36021077	36021078	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 2927 2928 +
Chr2	stalkie_big_nohaplotig	exon	36028710	36028719	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 2929 2938 +
Chr2	stalkie_big_nohaplotig	exon	36030452	36030458	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 2999 3005 +
Chr2	stalkie_big_nohaplotig	exon	36045280	36045286	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3006 3012 +
Chr2	stalkie_big_nohaplotig	exon	36067311	36067316	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3013 3018 +
Chr2	stalkie_big_nohaplotig	exon	36073851	36073854	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3019 3022 +
Chr2	stalkie_big_nohaplotig	exon	36079839	36079842	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3023 3026 +
Chr2	stalkie_big_nohaplotig	exon	36080021	36080031	90	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3034 3043 +
Chr2	stalkie_big_nohaplotig	exon	36092260	36092265	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3044 3049 +
Chr2	stalkie_big_nohaplotig	exon	36097147	36097157	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3050 3060 +
Chr2	stalkie_big_nohaplotig	exon	36109515	36109520	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3061 3066 +
Chr2	stalkie_big_nohaplotig	exon	36111121	36111129	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3067 3075 +
Chr2	stalkie_big_nohaplotig	exon	36111148	36111173	75	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3125 3152 +
Chr2	stalkie_big_nohaplotig	exon	36112160	36112161	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3153 3154 +
Chr2	stalkie_big_nohaplotig	exon	36119265	36119266	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3155 3156 +
Chr2	stalkie_big_nohaplotig	exon	36121520	36121529	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3157 3166 +
Chr2	stalkie_big_nohaplotig	exon	36124089	36124094	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3167 3172 +
Chr2	stalkie_big_nohaplotig	exon	36126917	36126924	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3187 3194 +
Chr2	stalkie_big_nohaplotig	exon	36134704	36134705	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3195 3196 +
Chr2	stalkie_big_nohaplotig	exon	36141725	36141733	88	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3197 3205 +
Chr2	stalkie_big_nohaplotig	exon	36158064	36158070	85	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3206 3212 +
Chr2	stalkie_big_nohaplotig	exon	36159056	36159057	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3213 3214 +
Chr2	stalkie_big_nohaplotig	exon	36160323	36160328	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3215 3220 +
Chr2	stalkie_big_nohaplotig	exon	36165684	36165687	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3221 3224 +
Chr2	stalkie_big_nohaplotig	exon	36170240	36170247	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3225 3232 +
Chr2	stalkie_big_nohaplotig	exon	36177464	36177477	78	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3233 3246 +
Chr2	stalkie_big_nohaplotig	exon	36180855	36180861	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3247 3253 +
Chr2	stalkie_big_nohaplotig	exon	36187054	36187059	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3254 3259 +
Chr2	stalkie_big_nohaplotig	exon	36191482	36191489	100	+	.	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3260 3267 +
Chr2	stalkie_big_nohaplotig	CDS	35991322	35991405	.	+	0	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	35991457	35991841	.	+	0	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 85 469 +
Chr2	stalkie_big_nohaplotig	CDS	35991908	35992093	.	+	2	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 470 655 +
Chr2	stalkie_big_nohaplotig	CDS	35992152	35992365	.	+	2	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 656 869 +
Chr2	stalkie_big_nohaplotig	CDS	35992497	35993675	.	+	1	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 870 2048 +
Chr2	stalkie_big_nohaplotig	CDS	35994910	35994976	.	+	1	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 2049 2115 +
Chr2	stalkie_big_nohaplotig	CDS	35995032	35995388	.	+	0	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 2116 2472 +
Chr2	stalkie_big_nohaplotig	CDS	35995474	35995649	.	+	0	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 2473 2648 +
Chr2	stalkie_big_nohaplotig	CDS	35995730	35995982	.	+	1	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 2649 2901 +
Chr2	stalkie_big_nohaplotig	CDS	36000947	36000954	.	+	0	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 2902 2909 +
Chr2	stalkie_big_nohaplotig	CDS	36013350	36013354	.	+	1	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 2910 2914 +
Chr2	stalkie_big_nohaplotig	CDS	36014044	36014051	.	+	2	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 2915 2922 +
Chr2	stalkie_big_nohaplotig	CDS	36016564	36016567	.	+	0	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 2923 2926 +
Chr2	stalkie_big_nohaplotig	CDS	36021077	36021078	.	+	2	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 2927 2928 +
Chr2	stalkie_big_nohaplotig	CDS	36028710	36028719	.	+	0	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 2929 2938 +
Chr2	stalkie_big_nohaplotig	CDS	36030452	36030458	.	+	2	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 2999 3005 +
Chr2	stalkie_big_nohaplotig	CDS	36045280	36045286	.	+	1	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3006 3012 +
Chr2	stalkie_big_nohaplotig	CDS	36067311	36067316	.	+	0	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3013 3018 +
Chr2	stalkie_big_nohaplotig	CDS	36073851	36073854	.	+	0	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3019 3022 +
Chr2	stalkie_big_nohaplotig	CDS	36079839	36079842	.	+	2	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3023 3026 +
Chr2	stalkie_big_nohaplotig	CDS	36080021	36080031	.	+	1	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3034 3043 +
Chr2	stalkie_big_nohaplotig	CDS	36092260	36092265	.	+	2	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3044 3049 +
Chr2	stalkie_big_nohaplotig	CDS	36097147	36097157	.	+	2	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3050 3060 +
Chr2	stalkie_big_nohaplotig	CDS	36109515	36109520	.	+	0	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3061 3066 +
Chr2	stalkie_big_nohaplotig	CDS	36111121	36111129	.	+	0	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3067 3075 +
Chr2	stalkie_big_nohaplotig	CDS	36111148	36111173	.	+	0	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3125 3152 +
Chr2	stalkie_big_nohaplotig	CDS	36112160	36112161	.	+	1	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3153 3154 +
Chr2	stalkie_big_nohaplotig	CDS	36119265	36119266	.	+	2	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3155 3156 +
Chr2	stalkie_big_nohaplotig	CDS	36121520	36121529	.	+	0	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3157 3166 +
Chr2	stalkie_big_nohaplotig	CDS	36124089	36124094	.	+	2	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3167 3172 +
Chr2	stalkie_big_nohaplotig	CDS	36126917	36126924	.	+	2	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3187 3194 +
Chr2	stalkie_big_nohaplotig	CDS	36134704	36134705	.	+	0	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3195 3196 +
Chr2	stalkie_big_nohaplotig	CDS	36141725	36141733	.	+	1	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3197 3205 +
Chr2	stalkie_big_nohaplotig	CDS	36158064	36158070	.	+	1	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3206 3212 +
Chr2	stalkie_big_nohaplotig	CDS	36159056	36159057	.	+	0	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3213 3214 +
Chr2	stalkie_big_nohaplotig	CDS	36160323	36160328	.	+	1	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3215 3220 +
Chr2	stalkie_big_nohaplotig	CDS	36165684	36165687	.	+	1	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3221 3224 +
Chr2	stalkie_big_nohaplotig	CDS	36170240	36170247	.	+	0	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3225 3232 +
Chr2	stalkie_big_nohaplotig	CDS	36177464	36177477	.	+	1	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3233 3246 +
Chr2	stalkie_big_nohaplotig	CDS	36180855	36180861	.	+	2	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3247 3253 +
Chr2	stalkie_big_nohaplotig	CDS	36187054	36187059	.	+	1	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3254 3259 +
Chr2	stalkie_big_nohaplotig	CDS	36191482	36191489	.	+	1	Parent=FBgn0034728.1.mrna1;Target=FBgn0034728.1 3260 3267 +
Chr2	gffcl	locus	36018092	36019253	.	-	.	ID=RLOC_00016389;geneIDs=FBgn0025378.4.path1;transcripts=FBgn0025378.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36018092	36019253	.	-	.	ID=FBgn0025378.4.mrna1;geneID=FBgn0025378.4.path1;Name=FBgn0025378.4;Dir=sensecoverage=100.0;identity=99.8;matches=928;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016389
Chr2	stalkie_big_nohaplotig	exon	36018092	36018448	100	-	.	Parent=FBgn0025378.4.mrna1;Target=FBgn0025378.4 574 930 +
Chr2	stalkie_big_nohaplotig	exon	36018520	36018796	99	-	.	Parent=FBgn0025378.4.mrna1;Target=FBgn0025378.4 297 573 +
Chr2	stalkie_big_nohaplotig	exon	36018958	36019253	99	-	.	Parent=FBgn0025378.4.mrna1;Target=FBgn0025378.4 1 296 +
Chr2	stalkie_big_nohaplotig	CDS	36018092	36018448	.	-	0	Parent=FBgn0025378.4.mrna1;Target=FBgn0025378.4 574 930 +
Chr2	stalkie_big_nohaplotig	CDS	36018520	36018796	.	-	1	Parent=FBgn0025378.4.mrna1;Target=FBgn0025378.4 297 573 +
Chr2	stalkie_big_nohaplotig	CDS	36018958	36019253	.	-	0	Parent=FBgn0025378.4.mrna1;Target=FBgn0025378.4 1 296 +
Chr2	gffcl	locus	36040317	36041582	.	-	.	ID=RLOC_00016391;geneIDs=FBgn0005683.2.path1;transcripts=FBgn0005683.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36040317	36041582	.	-	.	ID=FBgn0005683.2.mrna1;geneID=FBgn0005683.2.path1;Name=FBgn0005683.2;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1265;mismatches=1;indels=0;unknowns=0;Target=FBgn0005683.2 1266 1 .;locus=RLOC_00016391
Chr2	stalkie_big_nohaplotig	exon	36040317	36041582	99	-	.	Parent=FBgn0005683.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36040317	36041582	.	-	0	Parent=FBgn0005683.2.mrna1
Chr2	gffcl	locus	36052163	36059435	.	-	.	ID=RLOC_00016392;geneIDs=FBgn0031240.1.path1;transcripts=FBgn0031240.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36052163	36059435	.	-	.	ID=FBgn0031240.1.mrna1;geneID=FBgn0031240.1.path1;Name=FBgn0031240.1;Dir=sensecoverage=100.0;identity=99.8;matches=2062;mismatches=5;indels=0;unknowns=0;locus=RLOC_00016392
Chr2	stalkie_big_nohaplotig	exon	36052163	36052386	100	-	.	Parent=FBgn0031240.1.mrna1;Target=FBgn0031240.1 1844 2067 +
Chr2	stalkie_big_nohaplotig	exon	36052458	36052668	98	-	.	Parent=FBgn0031240.1.mrna1;Target=FBgn0031240.1 1633 1843 +
Chr2	stalkie_big_nohaplotig	exon	36052752	36052964	100	-	.	Parent=FBgn0031240.1.mrna1;Target=FBgn0031240.1 1420 1632 +
Chr2	stalkie_big_nohaplotig	exon	36053025	36053462	100	-	.	Parent=FBgn0031240.1.mrna1;Target=FBgn0031240.1 982 1419 +
Chr2	stalkie_big_nohaplotig	exon	36057758	36058258	99	-	.	Parent=FBgn0031240.1.mrna1;Target=FBgn0031240.1 481 981 +
Chr2	stalkie_big_nohaplotig	exon	36058339	36058467	100	-	.	Parent=FBgn0031240.1.mrna1;Target=FBgn0031240.1 352 480 +
Chr2	stalkie_big_nohaplotig	exon	36058551	36058685	100	-	.	Parent=FBgn0031240.1.mrna1;Target=FBgn0031240.1 217 351 +
Chr2	stalkie_big_nohaplotig	exon	36058744	36058944	100	-	.	Parent=FBgn0031240.1.mrna1;Target=FBgn0031240.1 16 216 +
Chr2	stalkie_big_nohaplotig	exon	36059421	36059435	100	-	.	Parent=FBgn0031240.1.mrna1;Target=FBgn0031240.1 1 15 +
Chr2	stalkie_big_nohaplotig	CDS	36052163	36052386	.	-	2	Parent=FBgn0031240.1.mrna1;Target=FBgn0031240.1 1844 2067 +
Chr2	stalkie_big_nohaplotig	CDS	36052458	36052668	.	-	0	Parent=FBgn0031240.1.mrna1;Target=FBgn0031240.1 1633 1843 +
Chr2	stalkie_big_nohaplotig	CDS	36052752	36052964	.	-	0	Parent=FBgn0031240.1.mrna1;Target=FBgn0031240.1 1420 1632 +
Chr2	stalkie_big_nohaplotig	CDS	36053025	36053462	.	-	0	Parent=FBgn0031240.1.mrna1;Target=FBgn0031240.1 982 1419 +
Chr2	stalkie_big_nohaplotig	CDS	36057758	36058258	.	-	0	Parent=FBgn0031240.1.mrna1;Target=FBgn0031240.1 481 981 +
Chr2	stalkie_big_nohaplotig	CDS	36058339	36058467	.	-	0	Parent=FBgn0031240.1.mrna1;Target=FBgn0031240.1 352 480 +
Chr2	stalkie_big_nohaplotig	CDS	36058551	36058685	.	-	0	Parent=FBgn0031240.1.mrna1;Target=FBgn0031240.1 217 351 +
Chr2	stalkie_big_nohaplotig	CDS	36058744	36058944	.	-	0	Parent=FBgn0031240.1.mrna1;Target=FBgn0031240.1 16 216 +
Chr2	stalkie_big_nohaplotig	CDS	36059421	36059435	.	-	0	Parent=FBgn0031240.1.mrna1;Target=FBgn0031240.1 1 15 +
Chr2	gffcl	locus	36090218	36093549	.	-	.	ID=RLOC_00016393;geneIDs=comp154814_c0_seq1.path1;transcripts=comp154814_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36090218	36093549	.	-	.	ID=comp154814_c0_seq1.mrna1;geneID=comp154814_c0_seq1.path1;Name=comp154814_c0_seq1;Dir=antisensecoverage=98.6;identity=98.0;matches=1099;mismatches=16;indels=7;unknowns=0;Target=comp154814_c0_seq1 997 1008 .;locus=RLOC_00016393
Chr2	stalkie_big_nohaplotig	exon	36090218	36090519	94	-	.	Parent=comp154814_c0_seq1.mrna1;Target=comp154814_c0_seq1 17 319 -
Chr2	stalkie_big_nohaplotig	exon	36092674	36092779	97	-	.	Parent=comp154814_c0_seq1.mrna1;Target=comp154814_c0_seq1 320 425 -
Chr2	stalkie_big_nohaplotig	exon	36092840	36093549	99	-	.	Parent=comp154814_c0_seq1.mrna1;Target=comp154814_c0_seq1 426 1135 -
Chr2	stalkie_big_nohaplotig	CDS	36093411	36093422	.	-	0	Parent=comp154814_c0_seq1.mrna1
Chr2	gffcl	locus	36162531	36185487	.	+	.	ID=RLOC_00016394;geneIDs=FBgn0034731.1.path1;transcripts=FBgn0034731.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36162531	36185487	.	+	.	ID=FBgn0034731.1.mrna1;geneID=FBgn0034731.1.path1;Name=FBgn0034731.1;Dir=sensecoverage=100.0;identity=99.9;matches=1259;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016394
Chr2	stalkie_big_nohaplotig	exon	36162531	36162603	100	+	.	Parent=FBgn0034731.1.mrna1;Target=FBgn0034731.1 1 73 +
Chr2	stalkie_big_nohaplotig	exon	36180437	36180522	100	+	.	Parent=FBgn0034731.1.mrna1;Target=FBgn0034731.1 74 159 +
Chr2	stalkie_big_nohaplotig	exon	36180591	36180854	99	+	.	Parent=FBgn0034731.1.mrna1;Target=FBgn0034731.1 160 423 +
Chr2	stalkie_big_nohaplotig	exon	36182748	36183093	100	+	.	Parent=FBgn0034731.1.mrna1;Target=FBgn0034731.1 424 769 +
Chr2	stalkie_big_nohaplotig	exon	36183178	36183414	100	+	.	Parent=FBgn0034731.1.mrna1;Target=FBgn0034731.1 770 1006 +
Chr2	stalkie_big_nohaplotig	exon	36183489	36183645	100	+	.	Parent=FBgn0034731.1.mrna1;Target=FBgn0034731.1 1007 1163 +
Chr2	stalkie_big_nohaplotig	exon	36185391	36185487	100	+	.	Parent=FBgn0034731.1.mrna1;Target=FBgn0034731.1 1164 1260 +
Chr2	stalkie_big_nohaplotig	CDS	36162531	36162603	.	+	0	Parent=FBgn0034731.1.mrna1;Target=FBgn0034731.1 1 73 +
Chr2	stalkie_big_nohaplotig	CDS	36180437	36180522	.	+	2	Parent=FBgn0034731.1.mrna1;Target=FBgn0034731.1 74 159 +
Chr2	stalkie_big_nohaplotig	CDS	36180591	36180854	.	+	0	Parent=FBgn0034731.1.mrna1;Target=FBgn0034731.1 160 423 +
Chr2	stalkie_big_nohaplotig	CDS	36182748	36183093	.	+	0	Parent=FBgn0034731.1.mrna1;Target=FBgn0034731.1 424 769 +
Chr2	stalkie_big_nohaplotig	CDS	36183178	36183414	.	+	2	Parent=FBgn0034731.1.mrna1;Target=FBgn0034731.1 770 1006 +
Chr2	stalkie_big_nohaplotig	CDS	36183489	36183645	.	+	2	Parent=FBgn0034731.1.mrna1;Target=FBgn0034731.1 1007 1163 +
Chr2	stalkie_big_nohaplotig	CDS	36185391	36185487	.	+	1	Parent=FBgn0034731.1.mrna1;Target=FBgn0034731.1 1164 1260 +
Chr2	gffcl	locus	36191804	36192379	.	-	.	ID=RLOC_00016396;geneIDs=comp148353_c0_seq1.path1;transcripts=comp148353_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36191804	36192379	.	-	.	ID=comp148353_c0_seq1.mrna1;geneID=comp148353_c0_seq1.path1;Name=comp148353_c0_seq1;Dir=indeterminatecoverage=98.2;identity=93.5;matches=572;mismatches=4;indels=36;unknowns=0;Target=comp148353_c0_seq1 623 12 .;CDS_Target=comp148353_c0_seq1 61 14 .;locus=RLOC_00016396
Chr2	stalkie_big_nohaplotig	exon	36191804	36192379	93	-	.	Parent=comp148353_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36192330	36192377	.	-	0	Parent=comp148353_c0_seq1.mrna1
Chr2	gffcl	locus	36195839	36197934	.	+	.	ID=RLOC_00016397;geneIDs=FBgn0034735.1.path1;transcripts=FBgn0034735.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36195839	36197934	.	+	.	ID=FBgn0034735.1.mrna1;geneID=FBgn0034735.1.path1;Name=FBgn0034735.1;Dir=sensecoverage=100.0;identity=99.5;matches=2032;mismatches=11;indels=0;unknowns=0;locus=RLOC_00016397
Chr2	stalkie_big_nohaplotig	exon	36195839	36197204	99	+	.	Parent=FBgn0034735.1.mrna1;Target=FBgn0034735.1 1 1366 +
Chr2	stalkie_big_nohaplotig	exon	36197258	36197934	98	+	.	Parent=FBgn0034735.1.mrna1;Target=FBgn0034735.1 1367 2043 +
Chr2	stalkie_big_nohaplotig	CDS	36195839	36197204	.	+	0	Parent=FBgn0034735.1.mrna1;Target=FBgn0034735.1 1 1366 +
Chr2	stalkie_big_nohaplotig	CDS	36197258	36197934	.	+	2	Parent=FBgn0034735.1.mrna1;Target=FBgn0034735.1 1367 2043 +
Chr2	gffcl	locus	36207416	36225734	.	+	.	ID=RLOC_00016399;geneIDs=FBgn0034733.1.path1;transcripts=FBgn0034733.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36207416	36225734	.	+	.	ID=FBgn0034733.1.mrna1;geneID=FBgn0034733.1.path1;Name=FBgn0034733.1;Dir=sensecoverage=100.0;identity=99.6;matches=3893;mismatches=16;indels=0;unknowns=0;locus=RLOC_00016399
Chr2	stalkie_big_nohaplotig	exon	36207416	36207616	100	+	.	Parent=FBgn0034733.1.mrna1;Target=FBgn0034733.1 1 201 +
Chr2	stalkie_big_nohaplotig	exon	36207673	36207952	98	+	.	Parent=FBgn0034733.1.mrna1;Target=FBgn0034733.1 202 481 +
Chr2	stalkie_big_nohaplotig	exon	36208058	36208370	99	+	.	Parent=FBgn0034733.1.mrna1;Target=FBgn0034733.1 482 794 +
Chr2	stalkie_big_nohaplotig	exon	36222373	36223135	99	+	.	Parent=FBgn0034733.1.mrna1;Target=FBgn0034733.1 795 1557 +
Chr2	stalkie_big_nohaplotig	exon	36223194	36223936	98	+	.	Parent=FBgn0034733.1.mrna1;Target=FBgn0034733.1 1558 2300 +
Chr2	stalkie_big_nohaplotig	exon	36224002	36224262	100	+	.	Parent=FBgn0034733.1.mrna1;Target=FBgn0034733.1 2301 2561 +
Chr2	stalkie_big_nohaplotig	exon	36224328	36225528	99	+	.	Parent=FBgn0034733.1.mrna1;Target=FBgn0034733.1 2562 3762 +
Chr2	stalkie_big_nohaplotig	exon	36225588	36225734	100	+	.	Parent=FBgn0034733.1.mrna1;Target=FBgn0034733.1 3763 3909 +
Chr2	stalkie_big_nohaplotig	CDS	36207416	36207616	.	+	0	Parent=FBgn0034733.1.mrna1;Target=FBgn0034733.1 1 201 +
Chr2	stalkie_big_nohaplotig	CDS	36207673	36207952	.	+	0	Parent=FBgn0034733.1.mrna1;Target=FBgn0034733.1 202 481 +
Chr2	stalkie_big_nohaplotig	CDS	36208058	36208370	.	+	2	Parent=FBgn0034733.1.mrna1;Target=FBgn0034733.1 482 794 +
Chr2	stalkie_big_nohaplotig	CDS	36222373	36223135	.	+	1	Parent=FBgn0034733.1.mrna1;Target=FBgn0034733.1 795 1557 +
Chr2	stalkie_big_nohaplotig	CDS	36223194	36223936	.	+	0	Parent=FBgn0034733.1.mrna1;Target=FBgn0034733.1 1558 2300 +
Chr2	stalkie_big_nohaplotig	CDS	36224002	36224262	.	+	1	Parent=FBgn0034733.1.mrna1;Target=FBgn0034733.1 2301 2561 +
Chr2	stalkie_big_nohaplotig	CDS	36224328	36225528	.	+	1	Parent=FBgn0034733.1.mrna1;Target=FBgn0034733.1 2562 3762 +
Chr2	stalkie_big_nohaplotig	CDS	36225588	36225734	.	+	0	Parent=FBgn0034733.1.mrna1;Target=FBgn0034733.1 3763 3909 +
Chr2	gffcl	locus	36226756	36236847	.	-	.	ID=RLOC_00016400;geneIDs=FBgn0039681.1.path1;transcripts=FBgn0039681.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36226756	36236847	.	-	.	ID=FBgn0039681.1.mrna1;geneID=FBgn0039681.1.path1;Name=FBgn0039681.1;Dir=sensecoverage=100.0;identity=99.6;matches=825;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016400
Chr2	stalkie_big_nohaplotig	exon	36226756	36226926	100	-	.	Parent=FBgn0039681.1.mrna1;Target=FBgn0039681.1 658 828 +
Chr2	stalkie_big_nohaplotig	exon	36227004	36227221	99	-	.	Parent=FBgn0039681.1.mrna1;Target=FBgn0039681.1 440 657 +
Chr2	stalkie_big_nohaplotig	exon	36227287	36227477	100	-	.	Parent=FBgn0039681.1.mrna1;Target=FBgn0039681.1 249 439 +
Chr2	stalkie_big_nohaplotig	exon	36227536	36227702	98	-	.	Parent=FBgn0039681.1.mrna1;Target=FBgn0039681.1 82 248 +
Chr2	stalkie_big_nohaplotig	exon	36236767	36236847	100	-	.	Parent=FBgn0039681.1.mrna1;Target=FBgn0039681.1 1 81 +
Chr2	stalkie_big_nohaplotig	CDS	36226756	36226926	.	-	0	Parent=FBgn0039681.1.mrna1;Target=FBgn0039681.1 658 828 +
Chr2	stalkie_big_nohaplotig	CDS	36227004	36227221	.	-	2	Parent=FBgn0039681.1.mrna1;Target=FBgn0039681.1 440 657 +
Chr2	stalkie_big_nohaplotig	CDS	36227287	36227477	.	-	1	Parent=FBgn0039681.1.mrna1;Target=FBgn0039681.1 249 439 +
Chr2	stalkie_big_nohaplotig	CDS	36227536	36227702	.	-	0	Parent=FBgn0039681.1.mrna1;Target=FBgn0039681.1 82 248 +
Chr2	stalkie_big_nohaplotig	CDS	36236767	36236847	.	-	0	Parent=FBgn0039681.1.mrna1;Target=FBgn0039681.1 1 81 +
Chr2	gffcl	locus	36241425	36242320	.	+	.	ID=RLOC_00016401;geneIDs=comp153241_c0_seq1.path1;transcripts=comp153241_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36241425	36242320	.	+	.	ID=comp153241_c0_seq1.mrna1;geneID=comp153241_c0_seq1.path1;Name=comp153241_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=895;mismatches=1;indels=0;unknowns=0;Target=comp153241_c0_seq1 896 1 .;CDS_Target=comp153241_c0_seq1 478 341 .;locus=RLOC_00016401
Chr2	stalkie_big_nohaplotig	exon	36241425	36242320	99	+	.	Parent=comp153241_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36241765	36241902	.	+	0	Parent=comp153241_c0_seq1.mrna1
Chr2	gffcl	locus	36242797	36245424	.	+	.	ID=RLOC_00016402;geneIDs=FBgn0013972.1.path1;transcripts=FBgn0013972.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36242797	36245424	.	+	.	ID=FBgn0013972.1.mrna1;geneID=FBgn0013972.1.path1;Name=FBgn0013972.1;Dir=sensecoverage=100.0;identity=99.9;matches=1987;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016402
Chr2	stalkie_big_nohaplotig	exon	36242797	36242958	98	+	.	Parent=FBgn0013972.1.mrna1;Target=FBgn0013972.1 1 162 +
Chr2	stalkie_big_nohaplotig	exon	36243015	36243088	100	+	.	Parent=FBgn0013972.1.mrna1;Target=FBgn0013972.1 163 236 +
Chr2	stalkie_big_nohaplotig	exon	36243154	36243394	100	+	.	Parent=FBgn0013972.1.mrna1;Target=FBgn0013972.1 237 477 +
Chr2	stalkie_big_nohaplotig	exon	36243696	36244044	100	+	.	Parent=FBgn0013972.1.mrna1;Target=FBgn0013972.1 478 826 +
Chr2	stalkie_big_nohaplotig	exon	36244122	36244306	100	+	.	Parent=FBgn0013972.1.mrna1;Target=FBgn0013972.1 827 1011 +
Chr2	stalkie_big_nohaplotig	exon	36244366	36245150	100	+	.	Parent=FBgn0013972.1.mrna1;Target=FBgn0013972.1 1012 1796 +
Chr2	stalkie_big_nohaplotig	exon	36245232	36245424	100	+	.	Parent=FBgn0013972.1.mrna1;Target=FBgn0013972.1 1797 1989 +
Chr2	stalkie_big_nohaplotig	CDS	36242797	36242958	.	+	0	Parent=FBgn0013972.1.mrna1;Target=FBgn0013972.1 1 162 +
Chr2	stalkie_big_nohaplotig	CDS	36243015	36243088	.	+	0	Parent=FBgn0013972.1.mrna1;Target=FBgn0013972.1 163 236 +
Chr2	stalkie_big_nohaplotig	CDS	36243154	36243394	.	+	1	Parent=FBgn0013972.1.mrna1;Target=FBgn0013972.1 237 477 +
Chr2	stalkie_big_nohaplotig	CDS	36243696	36244044	.	+	0	Parent=FBgn0013972.1.mrna1;Target=FBgn0013972.1 478 826 +
Chr2	stalkie_big_nohaplotig	CDS	36244122	36244306	.	+	2	Parent=FBgn0013972.1.mrna1;Target=FBgn0013972.1 827 1011 +
Chr2	stalkie_big_nohaplotig	CDS	36244366	36245150	.	+	0	Parent=FBgn0013972.1.mrna1;Target=FBgn0013972.1 1012 1796 +
Chr2	stalkie_big_nohaplotig	CDS	36245232	36245424	.	+	1	Parent=FBgn0013972.1.mrna1;Target=FBgn0013972.1 1797 1989 +
Chr2	gffcl	locus	36247913	36248619	.	+	.	ID=RLOC_00016403;geneIDs=comp67398_c0_seq1.path1,comp140603_c0_seq1.path1;transcripts=comp140603_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36247913	36248291	.	+	.	ID=comp140603_c0_seq1.mrna1;geneID=comp140603_c0_seq1.path1;Name=comp140603_c0_seq1;Dir=indeterminatecoverage=94.5;identity=98.9;matches=376;mismatches=3;indels=1;unknowns=0;Target=comp140603_c0_seq1 382 3 .;CDS_Target=comp140603_c0_seq1 127 5 .;locus=RLOC_00016403
Chr2	stalkie_big_nohaplotig	exon	36247913	36248291	98	+	.	Parent=comp140603_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36247915	36248037	.	+	0	Parent=comp140603_c0_seq1.mrna1
Chr2	gffcl	locus	36250636	36250979	.	-	.	ID=RLOC_00016404;geneIDs=comp117668_c0_seq1.path1;transcripts=comp117668_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36250636	36250979	.	-	.	ID=comp117668_c0_seq1.mrna1;geneID=comp117668_c0_seq1.path1;Name=comp117668_c0_seq1;Dir=indeterminatecoverage=95.0;identity=99.7;matches=343;mismatches=0;indels=1;unknowns=0;Target=comp117668_c0_seq1 343 1 .;CDS_Target=comp117668_c0_seq1 341 315 .;locus=RLOC_00016404
Chr2	stalkie_big_nohaplotig	exon	36250636	36250979	99	-	.	Parent=comp117668_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36250638	36250664	.	-	0	Parent=comp117668_c0_seq1.mrna1
Chr2	gffcl	locus	36251114	36251804	.	-	.	ID=RLOC_00016405;geneIDs=comp152518_c0_seq1.path1;transcripts=comp152518_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36251114	36251804	.	-	.	ID=comp152518_c0_seq1.mrna1;geneID=comp152518_c0_seq1.path1;Name=comp152518_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.3;matches=686;mismatches=5;indels=0;unknowns=0;Target=comp152518_c0_seq1 691 1 .;CDS_Target=comp152518_c0_seq1 427 257 .;locus=RLOC_00016405
Chr2	stalkie_big_nohaplotig	exon	36251114	36251804	99	-	.	Parent=comp152518_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36251378	36251548	.	-	0	Parent=comp152518_c0_seq1.mrna1
Chr2	gffcl	locus	36252344	36252782	.	-	.	ID=RLOC_00016406;geneIDs=comp147445_c0_seq1.path1;transcripts=comp147445_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36252344	36252782	.	-	.	ID=comp147445_c0_seq1.mrna1;geneID=comp147445_c0_seq1.path1;Name=comp147445_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=438;mismatches=1;indels=1;unknowns=0;Target=comp147445_c0_seq1 440 1 .;CDS_Target=comp147445_c0_seq1 79 53 .;locus=RLOC_00016406
Chr2	stalkie_big_nohaplotig	exon	36252344	36252782	99	-	.	Parent=comp147445_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36252705	36252731	.	-	0	Parent=comp147445_c0_seq1.mrna1
Chr2	gffcl	locus	36254548	36342208	.	-	.	ID=RLOC_00016407;geneIDs=FBgn0003175.1.path1,comp162050_c0_seq1.path1;transcripts=comp162050_c0_seq1.mrna1,FBgn0003175.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36254548	36342208	.	-	.	ID=comp162050_c0_seq1.mrna1;geneID=comp162050_c0_seq1.path1;Name=comp162050_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=6841;mismatches=9;indels=20;unknowns=0;locus=RLOC_00016407
Chr2	stalkie_big_nohaplotig	exon	36254548	36257071	99	-	.	Parent=comp162050_c0_seq1.mrna1;Target=comp162050_c0_seq1 1 2524 -
Chr2	stalkie_big_nohaplotig	exon	36257132	36257881	99	-	.	Parent=comp162050_c0_seq1.mrna1;Target=comp162050_c0_seq1 2525 3274 -
Chr2	stalkie_big_nohaplotig	exon	36305636	36305711	100	-	.	Parent=comp162050_c0_seq1.mrna1;Target=comp162050_c0_seq1 3275 3350 -
Chr2	stalkie_big_nohaplotig	exon	36305771	36305912	100	-	.	Parent=comp162050_c0_seq1.mrna1;Target=comp162050_c0_seq1 3351 3492 -
Chr2	stalkie_big_nohaplotig	exon	36306240	36306600	94	-	.	Parent=comp162050_c0_seq1.mrna1;Target=comp162050_c0_seq1 3493 3873 -
Chr2	stalkie_big_nohaplotig	exon	36307935	36308153	100	-	.	Parent=comp162050_c0_seq1.mrna1;Target=comp162050_c0_seq1 3874 4092 -
Chr2	stalkie_big_nohaplotig	exon	36308217	36308344	100	-	.	Parent=comp162050_c0_seq1.mrna1;Target=comp162050_c0_seq1 4093 4220 -
Chr2	stalkie_big_nohaplotig	exon	36309735	36309921	100	-	.	Parent=comp162050_c0_seq1.mrna1;Target=comp162050_c0_seq1 4221 4407 -
Chr2	stalkie_big_nohaplotig	exon	36309997	36310275	100	-	.	Parent=comp162050_c0_seq1.mrna1;Target=comp162050_c0_seq1 4408 4686 -
Chr2	stalkie_big_nohaplotig	exon	36310347	36310474	100	-	.	Parent=comp162050_c0_seq1.mrna1;Target=comp162050_c0_seq1 4687 4814 -
Chr2	stalkie_big_nohaplotig	exon	36315390	36315673	100	-	.	Parent=comp162050_c0_seq1.mrna1;Target=comp162050_c0_seq1 4815 5098 -
Chr2	stalkie_big_nohaplotig	exon	36315747	36315966	100	-	.	Parent=comp162050_c0_seq1.mrna1;Target=comp162050_c0_seq1 5099 5318 -
Chr2	stalkie_big_nohaplotig	exon	36340657	36342208	100	-	.	Parent=comp162050_c0_seq1.mrna1;Target=comp162050_c0_seq1 5319 6870 -
Chr2	stalkie_big_nohaplotig	CDS	36306561	36306600	.	-	1	Parent=comp162050_c0_seq1.mrna1;Target=comp162050_c0_seq1 3834 3873 .
Chr2	stalkie_big_nohaplotig	CDS	36307935	36308153	.	-	1	Parent=comp162050_c0_seq1.mrna1;Target=comp162050_c0_seq1 3874 4092 .
Chr2	stalkie_big_nohaplotig	CDS	36308217	36308344	.	-	0	Parent=comp162050_c0_seq1.mrna1;Target=comp162050_c0_seq1 4093 4220 .
Chr2	stalkie_big_nohaplotig	CDS	36309735	36309921	.	-	1	Parent=comp162050_c0_seq1.mrna1;Target=comp162050_c0_seq1 4221 4407 .
Chr2	stalkie_big_nohaplotig	CDS	36309997	36310275	.	-	1	Parent=comp162050_c0_seq1.mrna1;Target=comp162050_c0_seq1 4408 4686 .
Chr2	stalkie_big_nohaplotig	CDS	36310347	36310474	.	-	0	Parent=comp162050_c0_seq1.mrna1;Target=comp162050_c0_seq1 4687 4814 .
Chr2	stalkie_big_nohaplotig	CDS	36315390	36315673	.	-	2	Parent=comp162050_c0_seq1.mrna1;Target=comp162050_c0_seq1 4815 5098 .
Chr2	stalkie_big_nohaplotig	CDS	36315747	36315966	.	-	0	Parent=comp162050_c0_seq1.mrna1;Target=comp162050_c0_seq1 5099 5318 .
Chr2	stalkie_big_nohaplotig	CDS	36340657	36342207	.	-	0	Parent=comp162050_c0_seq1.mrna1;Target=comp162050_c0_seq1 5319 6869 .
Chr2	stalkie_big_nohaplotig	mRNA	36254958	36342207	.	-	.	ID=FBgn0003175.1.mrna1;geneID=FBgn0003175.1.path1;Name=FBgn0003175.1;Dir=sensecoverage=100.0;identity=99.9;matches=6071;mismatches=7;indels=0;unknowns=0;locus=RLOC_00016407
Chr2	stalkie_big_nohaplotig	exon	36254958	36257071	99	-	.	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 3965 6078 +
Chr2	stalkie_big_nohaplotig	exon	36257132	36257881	99	-	.	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 3215 3964 +
Chr2	stalkie_big_nohaplotig	exon	36305636	36305711	100	-	.	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 3139 3214 +
Chr2	stalkie_big_nohaplotig	exon	36305771	36305912	100	-	.	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 2997 3138 +
Chr2	stalkie_big_nohaplotig	exon	36307935	36308153	100	-	.	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 2778 2996 +
Chr2	stalkie_big_nohaplotig	exon	36308217	36308344	100	-	.	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 2650 2777 +
Chr2	stalkie_big_nohaplotig	exon	36309735	36309921	100	-	.	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 2463 2649 +
Chr2	stalkie_big_nohaplotig	exon	36309997	36310275	100	-	.	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 2184 2462 +
Chr2	stalkie_big_nohaplotig	exon	36310347	36310474	100	-	.	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 2056 2183 +
Chr2	stalkie_big_nohaplotig	exon	36315390	36315673	100	-	.	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 1772 2055 +
Chr2	stalkie_big_nohaplotig	exon	36315747	36315966	100	-	.	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 1552 1771 +
Chr2	stalkie_big_nohaplotig	exon	36340657	36342207	100	-	.	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 1 1551 +
Chr2	stalkie_big_nohaplotig	CDS	36254958	36257071	.	-	2	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 3965 6078 +
Chr2	stalkie_big_nohaplotig	CDS	36257132	36257881	.	-	2	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 3215 3964 +
Chr2	stalkie_big_nohaplotig	CDS	36305636	36305711	.	-	0	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 3139 3214 +
Chr2	stalkie_big_nohaplotig	CDS	36305771	36305912	.	-	1	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 2997 3138 +
Chr2	stalkie_big_nohaplotig	CDS	36307935	36308153	.	-	1	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 2778 2996 +
Chr2	stalkie_big_nohaplotig	CDS	36308217	36308344	.	-	0	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 2650 2777 +
Chr2	stalkie_big_nohaplotig	CDS	36309735	36309921	.	-	1	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 2463 2649 +
Chr2	stalkie_big_nohaplotig	CDS	36309997	36310275	.	-	1	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 2184 2462 +
Chr2	stalkie_big_nohaplotig	CDS	36310347	36310474	.	-	0	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 2056 2183 +
Chr2	stalkie_big_nohaplotig	CDS	36315390	36315673	.	-	2	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 1772 2055 +
Chr2	stalkie_big_nohaplotig	CDS	36315747	36315966	.	-	0	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 1552 1771 +
Chr2	stalkie_big_nohaplotig	CDS	36340657	36342207	.	-	0	Parent=FBgn0003175.1.mrna1;Target=FBgn0003175.1 1 1551 +
Chr2	gffcl	locus	36268458	36269196	.	+	.	ID=RLOC_00016408;geneIDs=comp138163_c1_seq1.path1;transcripts=comp138163_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36268458	36269196	.	+	.	ID=comp138163_c1_seq1.mrna1;geneID=comp138163_c1_seq1.path1;Name=comp138163_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=739;mismatches=0;indels=0;unknowns=0;Target=comp138163_c1_seq1 739 1 .;CDS_Target=comp138163_c1_seq1 446 312 .;locus=RLOC_00016408
Chr2	stalkie_big_nohaplotig	exon	36268458	36269196	100	+	.	Parent=comp138163_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36268769	36268903	.	+	0	Parent=comp138163_c1_seq1.mrna1
Chr2	gffcl	locus	36331641	36332325	.	+	.	ID=RLOC_00016409;geneIDs=comp149250_c1_seq1.path1;transcripts=comp149250_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36331641	36332325	.	+	.	ID=comp149250_c1_seq1.mrna1;geneID=comp149250_c1_seq1.path1;Name=comp149250_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=674;mismatches=1;indels=11;unknowns=0;Target=comp149250_c1_seq1 676 1 .;CDS_Target=comp149250_c1_seq1 271 131 .;locus=RLOC_00016409
Chr2	stalkie_big_nohaplotig	exon	36331641	36332325	98	+	.	Parent=comp149250_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36331771	36331921	.	+	0	Parent=comp149250_c1_seq1.mrna1
Chr2	gffcl	locus	36361134	36362875	.	-	.	ID=RLOC_00016410;geneIDs=FBgn0260866.1.path1;transcripts=FBgn0260866.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36361134	36362875	.	-	.	ID=FBgn0260866.1.mrna1;geneID=FBgn0260866.1.path1;Name=FBgn0260866.1;Dir=sensecoverage=100.0;identity=99.9;matches=1537;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016410
Chr2	stalkie_big_nohaplotig	exon	36361134	36361347	99	-	.	Parent=FBgn0260866.1.mrna1;Target=FBgn0260866.1 1326 1539 +
Chr2	stalkie_big_nohaplotig	exon	36361468	36362142	100	-	.	Parent=FBgn0260866.1.mrna1;Target=FBgn0260866.1 651 1325 +
Chr2	stalkie_big_nohaplotig	exon	36362226	36362875	100	-	.	Parent=FBgn0260866.1.mrna1;Target=FBgn0260866.1 1 650 +
Chr2	stalkie_big_nohaplotig	CDS	36361134	36361347	.	-	1	Parent=FBgn0260866.1.mrna1;Target=FBgn0260866.1 1326 1539 +
Chr2	stalkie_big_nohaplotig	CDS	36361468	36362142	.	-	1	Parent=FBgn0260866.1.mrna1;Target=FBgn0260866.1 651 1325 +
Chr2	stalkie_big_nohaplotig	CDS	36362226	36362875	.	-	0	Parent=FBgn0260866.1.mrna1;Target=FBgn0260866.1 1 650 +
Chr2	gffcl	locus	36432597	36438352	.	+	.	ID=RLOC_00016411;geneIDs=comp148914_c0_seq1.path1;transcripts=comp148914_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36432597	36438352	.	+	.	ID=comp148914_c0_seq1.mrna1;geneID=comp148914_c0_seq1.path1;Name=comp148914_c0_seq1;Dir=indeterminatecoverage=74.3;identity=99.5;matches=1624;mismatches=4;indels=4;unknowns=0;locus=RLOC_00016411
Chr2	stalkie_big_nohaplotig	exon	36432597	36432719	98	+	.	Parent=comp148914_c0_seq1.mrna1;Target=comp148914_c0_seq1 670 548 .
Chr2	stalkie_big_nohaplotig	exon	36433692	36434545	99	+	.	Parent=comp148914_c0_seq1.mrna1;Target=comp148914_c0_seq1 1524 671 .
Chr2	stalkie_big_nohaplotig	exon	36437702	36438352	99	+	.	Parent=comp148914_c0_seq1.mrna1;Target=comp148914_c0_seq1 2179 1525 .
Chr2	stalkie_big_nohaplotig	CDS	36434537	36434545	.	+	0	Parent=comp148914_c0_seq1.mrna1;Target=comp148914_c0_seq1 1524 1516 .
Chr2	stalkie_big_nohaplotig	CDS	36437702	36438016	.	+	0	Parent=comp148914_c0_seq1.mrna1;Target=comp148914_c0_seq1 1839 1525 .
Chr2	gffcl	locus	36440025	36440480	.	-	.	ID=RLOC_00016412;geneIDs=comp152323_c0_seq1.path1;transcripts=comp152323_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36440025	36440480	.	-	.	ID=comp152323_c0_seq1.mrna1;geneID=comp152323_c0_seq1.path1;Name=comp152323_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=456;mismatches=0;indels=2;unknowns=0;Target=comp152323_c0_seq1 458 1 .;CDS_Target=comp152323_c0_seq1 407 312 .;locus=RLOC_00016412
Chr2	stalkie_big_nohaplotig	exon	36440025	36440480	99	-	.	Parent=comp152323_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36440076	36440171	.	-	0	Parent=comp152323_c0_seq1.mrna1
Chr2	gffcl	locus	36442275	36442842	.	+	.	ID=RLOC_00016413;geneIDs=comp152512_c0_seq1.path1;transcripts=comp152512_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36442275	36442842	.	+	.	ID=comp152512_c0_seq1.mrna1;geneID=comp152512_c0_seq1.path1;Name=comp152512_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=566;mismatches=2;indels=0;unknowns=0;Target=comp152512_c0_seq1 568 1 .;CDS_Target=comp152512_c0_seq1 478 326 .;locus=RLOC_00016413
Chr2	stalkie_big_nohaplotig	exon	36442275	36442842	99	+	.	Parent=comp152512_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36442600	36442752	.	+	0	Parent=comp152512_c0_seq1.mrna1
Chr2	gffcl	locus	36445032	36449117	.	+	.	ID=RLOC_00016414;geneIDs=FBgn0050280.1.path1,FBgn0050281.1.path1,comp117356_c0_seq1.path1;transcripts=FBgn0050280.1.mrna1,FBgn0050281.1.mrna1,comp117356_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36445032	36446068	.	+	.	ID=FBgn0050280.1.mrna1;geneID=FBgn0050280.1.path1;Name=FBgn0050280.1;Dir=sensecoverage=98.2;identity=99.9;matches=759;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016414
Chr2	stalkie_big_nohaplotig	exon	36445032	36445134	100	+	.	Parent=FBgn0050280.1.mrna1;Target=FBgn0050280.1 15 117 +
Chr2	stalkie_big_nohaplotig	exon	36445206	36445729	99	+	.	Parent=FBgn0050280.1.mrna1;Target=FBgn0050280.1 118 641 +
Chr2	stalkie_big_nohaplotig	exon	36445936	36446068	100	+	.	Parent=FBgn0050280.1.mrna1;Target=FBgn0050280.1 642 774 +
Chr2	stalkie_big_nohaplotig	CDS	36445033	36445134	.	+	0	Parent=FBgn0050280.1.mrna1;Target=FBgn0050280.1 16 117 +
Chr2	stalkie_big_nohaplotig	CDS	36445206	36445729	.	+	0	Parent=FBgn0050280.1.mrna1;Target=FBgn0050280.1 118 641 +
Chr2	stalkie_big_nohaplotig	CDS	36445936	36446068	.	+	1	Parent=FBgn0050280.1.mrna1;Target=FBgn0050280.1 642 774 +
Chr2	stalkie_big_nohaplotig	mRNA	36445032	36449117	.	+	.	ID=FBgn0050281.1.mrna1;geneID=FBgn0050281.1.path1;Name=FBgn0050281.1;Dir=sensecoverage=98.2;identity=99.2;matches=754;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016414
Chr2	stalkie_big_nohaplotig	exon	36445032	36445134	100	+	.	Parent=FBgn0050281.1.mrna1;Target=FBgn0050281.1 15 117 +
Chr2	stalkie_big_nohaplotig	exon	36445206	36445245	100	+	.	Parent=FBgn0050281.1.mrna1;Target=FBgn0050281.1 118 157 +
Chr2	stalkie_big_nohaplotig	exon	36448264	36448747	98	+	.	Parent=FBgn0050281.1.mrna1;Target=FBgn0050281.1 158 641 +
Chr2	stalkie_big_nohaplotig	exon	36448985	36449117	100	+	.	Parent=FBgn0050281.1.mrna1;Target=FBgn0050281.1 642 774 +
Chr2	stalkie_big_nohaplotig	CDS	36445033	36445134	.	+	0	Parent=FBgn0050281.1.mrna1;Target=FBgn0050281.1 16 117 +
Chr2	stalkie_big_nohaplotig	CDS	36445206	36445245	.	+	0	Parent=FBgn0050281.1.mrna1;Target=FBgn0050281.1 118 157 +
Chr2	stalkie_big_nohaplotig	CDS	36448264	36448747	.	+	2	Parent=FBgn0050281.1.mrna1;Target=FBgn0050281.1 158 641 +
Chr2	stalkie_big_nohaplotig	CDS	36448985	36449117	.	+	1	Parent=FBgn0050281.1.mrna1;Target=FBgn0050281.1 642 774 +
Chr2	stalkie_big_nohaplotig	mRNA	36445706	36445956	.	+	.	ID=comp117356_c0_seq1.mrna1;geneID=comp117356_c0_seq1.path1;Name=comp117356_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=251;mismatches=0;indels=0;unknowns=0;Target=comp117356_c0_seq1 251 1 .;CDS_Target=comp117356_c0_seq1 100 2 .;locus=RLOC_00016414
Chr2	stalkie_big_nohaplotig	exon	36445706	36445956	100	+	.	Parent=comp117356_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36445707	36445805	.	+	0	Parent=comp117356_c0_seq1.mrna1
Chr2	gffcl	locus	36451256	36451536	.	+	.	ID=RLOC_00016415;geneIDs=comp118556_c1_seq1.path1;transcripts=comp118556_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36451256	36451536	.	+	.	ID=comp118556_c1_seq1.mrna1;geneID=comp118556_c1_seq1.path1;Name=comp118556_c1_seq1;Dir=sensecoverage=90.6;identity=99.1;matches=220;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016415
Chr2	stalkie_big_nohaplotig	exon	36451256	36451357	99	+	.	Parent=comp118556_c1_seq1.mrna1;Target=comp118556_c1_seq1 8 109 +
Chr2	stalkie_big_nohaplotig	exon	36451417	36451536	99	+	.	Parent=comp118556_c1_seq1.mrna1;Target=comp118556_c1_seq1 110 229 +
Chr2	stalkie_big_nohaplotig	CDS	36451256	36451357	.	+	0	Parent=comp118556_c1_seq1.mrna1;Target=comp118556_c1_seq1 8 109 +
Chr2	stalkie_big_nohaplotig	CDS	36451417	36451536	.	+	0	Parent=comp118556_c1_seq1.mrna1;Target=comp118556_c1_seq1 110 229 +
Chr2	gffcl	locus	36452094	36452670	.	+	.	ID=RLOC_00016416;geneIDs=comp135401_c0_seq1.path1;transcripts=comp135401_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36452094	36452670	.	+	.	ID=comp135401_c0_seq1.mrna1;geneID=comp135401_c0_seq1.path1;Name=comp135401_c0_seq1;Dir=indeterminatecoverage=98.4;identity=93.8;matches=543;mismatches=17;indels=19;unknowns=0;Target=comp135401_c0_seq1 566 5 .;CDS_Target=comp135401_c0_seq1 555 346 .;locus=RLOC_00016416
Chr2	stalkie_big_nohaplotig	exon	36452094	36452670	93	+	.	Parent=comp135401_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36452435	36452659	.	+	0	Parent=comp135401_c0_seq1.mrna1
Chr2	gffcl	locus	36461625	36462230	.	-	.	ID=RLOC_00016417;geneIDs=comp144610_c0_seq1.path1;transcripts=comp144610_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36461625	36462230	.	-	.	ID=comp144610_c0_seq1.mrna1;geneID=comp144610_c0_seq1.path1;Name=comp144610_c0_seq1;Dir=indeterminatecoverage=91.5;identity=98.3;matches=596;mismatches=10;indels=0;unknowns=0;Target=comp144610_c0_seq1 625 20 .;CDS_Target=comp144610_c0_seq1 470 384 .;locus=RLOC_00016417
Chr2	stalkie_big_nohaplotig	exon	36461625	36462230	98	-	.	Parent=comp144610_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36461780	36461866	.	-	0	Parent=comp144610_c0_seq1.mrna1
Chr2	gffcl	locus	36462678	36463768	.	+	.	ID=RLOC_00016418;geneIDs=comp155556_c0_seq1.path1;transcripts=comp155556_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36462678	36463768	.	+	.	ID=comp155556_c0_seq1.mrna1;geneID=comp155556_c0_seq1.path1;Name=comp155556_c0_seq1;Dir=indeterminatecoverage=99.5;identity=96.8;matches=1060;mismatches=29;indels=6;unknowns=0;Target=comp155556_c0_seq1 1093 1 .;CDS_Target=comp155556_c0_seq1 238 110 .;locus=RLOC_00016418
Chr2	stalkie_big_nohaplotig	exon	36462678	36463768	96	+	.	Parent=comp155556_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36462787	36462915	.	+	0	Parent=comp155556_c0_seq1.mrna1
Chr2	gffcl	locus	36466695	36470517	.	-	.	ID=RLOC_00016419;geneIDs=FBgn0034860.1.path2;transcripts=FBgn0034860.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	36466695	36470517	.	-	.	ID=FBgn0034860.1.mrna2;geneID=FBgn0034860.1.path2;Name=FBgn0034860.1;Dir=sensecoverage=64.3;identity=99.5;matches=426;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016419
Chr2	stalkie_big_nohaplotig	exon	36466695	36466953	99	-	.	Parent=FBgn0034860.1.mrna2;Target=FBgn0034860.1 395 653 +
Chr2	stalkie_big_nohaplotig	exon	36470349	36470517	100	-	.	Parent=FBgn0034860.1.mrna2;Target=FBgn0034860.1 226 394 +
Chr2	stalkie_big_nohaplotig	CDS	36466697	36466953	.	-	2	Parent=FBgn0034860.1.mrna2;Target=FBgn0034860.1 395 651 +
Chr2	stalkie_big_nohaplotig	CDS	36470349	36470517	.	-	0	Parent=FBgn0034860.1.mrna2;Target=FBgn0034860.1 226 394 +
Chr2	gffcl	locus	36469622	36469915	.	+	.	ID=RLOC_00016420;geneIDs=comp113176_c0_seq1.path1,comp135494_c0_seq1.path1;transcripts=comp135494_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36469622	36469915	.	+	.	ID=comp135494_c0_seq1.mrna1;geneID=comp135494_c0_seq1.path1;Name=comp135494_c0_seq1;Dir=indeterminatecoverage=92.0;identity=89.5;matches=264;mismatches=1;indels=30;unknowns=0;Target=comp135494_c0_seq1 266 1 .;CDS_Target=comp135494_c0_seq1 77 3 .;locus=RLOC_00016420
Chr2	stalkie_big_nohaplotig	exon	36469622	36469915	89	+	.	Parent=comp135494_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36469624	36469698	.	+	0	Parent=comp135494_c0_seq1.mrna1
Chr2	gffcl	locus	36477304	36615097	.	-	.	ID=RLOC_00016421;geneIDs=comp156560_c0_seq1.path1;transcripts=comp156560_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36477304	36615097	.	-	.	ID=comp156560_c0_seq1.mrna1;geneID=comp156560_c0_seq1.path1;Name=comp156560_c0_seq1;Dir=sensecoverage=91.6;identity=75.5;matches=571;mismatches=90;indels=95;unknowns=0;locus=RLOC_00016421
Chr2	stalkie_big_nohaplotig	exon	36477304	36477609	97	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 582 890 +
Chr2	stalkie_big_nohaplotig	exon	36485620	36485628	100	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 573 581 +
Chr2	stalkie_big_nohaplotig	exon	36493693	36493746	51	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 523 572 +
Chr2	stalkie_big_nohaplotig	exon	36495507	36495546	47	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 432 486 +
Chr2	stalkie_big_nohaplotig	exon	36503723	36503730	100	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 424 431 +
Chr2	stalkie_big_nohaplotig	exon	36505253	36505261	100	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 410 418 +
Chr2	stalkie_big_nohaplotig	exon	36511126	36511129	100	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 406 409 +
Chr2	stalkie_big_nohaplotig	exon	36519970	36519982	100	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 371 383 +
Chr2	stalkie_big_nohaplotig	exon	36536091	36536100	15	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 307 370 +
Chr2	stalkie_big_nohaplotig	exon	36539935	36539939	80	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 302 306 +
Chr2	stalkie_big_nohaplotig	exon	36542504	36542516	76	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 289 301 +
Chr2	stalkie_big_nohaplotig	exon	36548540	36548585	57	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 242 288 +
Chr2	stalkie_big_nohaplotig	exon	36553983	36553985	100	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 239 241 +
Chr2	stalkie_big_nohaplotig	exon	36561865	36561934	58	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 158 226 +
Chr2	stalkie_big_nohaplotig	exon	36569503	36569519	76	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 141 157 +
Chr2	stalkie_big_nohaplotig	exon	36576861	36576876	75	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 125 140 +
Chr2	stalkie_big_nohaplotig	exon	36579451	36579460	80	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 115 124 +
Chr2	stalkie_big_nohaplotig	exon	36584480	36584481	100	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 113 114 +
Chr2	stalkie_big_nohaplotig	exon	36589230	36589231	100	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 111 112 +
Chr2	stalkie_big_nohaplotig	exon	36590185	36590188	100	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 107 110 +
Chr2	stalkie_big_nohaplotig	exon	36595624	36595633	100	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 97 106 +
Chr2	stalkie_big_nohaplotig	exon	36601943	36601953	72	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 89 96 +
Chr2	stalkie_big_nohaplotig	exon	36605553	36605554	100	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 87 88 +
Chr2	stalkie_big_nohaplotig	exon	36607200	36607203	100	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 83 86 +
Chr2	stalkie_big_nohaplotig	exon	36615091	36615097	100	-	.	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 76 82 +
Chr2	stalkie_big_nohaplotig	CDS	36477475	36477609	.	-	0	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 582 716 +
Chr2	stalkie_big_nohaplotig	CDS	36485620	36485628	.	-	0	Parent=comp156560_c0_seq1.mrna1;Target=comp156560_c0_seq1 573 581 +
Chr2	gffcl	locus	36482378	36501710	.	-	.	ID=RLOC_00016422;geneIDs=comp1013427_c0_seq1.path1;transcripts=comp1013427_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36482378	36501710	.	-	.	ID=comp1013427_c0_seq1.mrna1;geneID=comp1013427_c0_seq1.path1;Name=comp1013427_c0_seq1;Dir=sensecoverage=100.0;identity=98.0;matches=383;mismatches=8;indels=0;unknowns=0;locus=RLOC_00016422
Chr2	stalkie_big_nohaplotig	exon	36482378	36482697	97	-	.	Parent=comp1013427_c0_seq1.mrna1;Target=comp1013427_c0_seq1 72 391 +
Chr2	stalkie_big_nohaplotig	exon	36501640	36501710	98	-	.	Parent=comp1013427_c0_seq1.mrna1;Target=comp1013427_c0_seq1 1 71 +
Chr2	stalkie_big_nohaplotig	CDS	36482627	36482697	.	-	2	Parent=comp1013427_c0_seq1.mrna1;Target=comp1013427_c0_seq1 72 142 +
Chr2	stalkie_big_nohaplotig	CDS	36501640	36501709	.	-	0	Parent=comp1013427_c0_seq1.mrna1;Target=comp1013427_c0_seq1 2 71 +
Chr2	gffcl	locus	36488356	36510346	.	-	.	ID=RLOC_00016423;geneIDs=FBgn0050281.2.path1;transcripts=FBgn0050281.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36488356	36510346	.	-	.	ID=FBgn0050281.2.mrna1;geneID=FBgn0050281.2.path1;Name=FBgn0050281.2;Dir=sensecoverage=100.0;identity=99.6;matches=813;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016423
Chr2	stalkie_big_nohaplotig	exon	36488356	36488488	100	-	.	Parent=FBgn0050281.2.mrna1;Target=FBgn0050281.2 684 816 +
Chr2	stalkie_big_nohaplotig	exon	36488733	36489256	99	-	.	Parent=FBgn0050281.2.mrna1;Target=FBgn0050281.2 160 683 +
Chr2	stalkie_big_nohaplotig	exon	36510188	36510346	98	-	.	Parent=FBgn0050281.2.mrna1;Target=FBgn0050281.2 1 159 +
Chr2	stalkie_big_nohaplotig	CDS	36488356	36488488	.	-	1	Parent=FBgn0050281.2.mrna1;Target=FBgn0050281.2 684 816 +
Chr2	stalkie_big_nohaplotig	CDS	36488733	36489256	.	-	0	Parent=FBgn0050281.2.mrna1;Target=FBgn0050281.2 160 683 +
Chr2	stalkie_big_nohaplotig	CDS	36510188	36510346	.	-	0	Parent=FBgn0050281.2.mrna1;Target=FBgn0050281.2 1 159 +
Chr2	gffcl	locus	36520402	36525742	.	-	.	ID=RLOC_00016424;geneIDs=comp142756_c0_seq1.path1;transcripts=comp142756_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36520402	36525742	.	-	.	ID=comp142756_c0_seq1.mrna1;geneID=comp142756_c0_seq1.path1;Name=comp142756_c0_seq1;Dir=sensecoverage=95.5;identity=92.8;matches=361;mismatches=20;indels=8;unknowns=0;locus=RLOC_00016424
Chr2	stalkie_big_nohaplotig	exon	36520402	36520492	92	-	.	Parent=comp142756_c0_seq1.mrna1;Target=comp142756_c0_seq1 291 381 +
Chr2	stalkie_big_nohaplotig	exon	36525445	36525742	92	-	.	Parent=comp142756_c0_seq1.mrna1;Target=comp142756_c0_seq1 1 290 +
Chr2	stalkie_big_nohaplotig	CDS	36520457	36520492	.	-	0	Parent=comp142756_c0_seq1.mrna1;Target=comp142756_c0_seq1 291 326 +
Chr2	stalkie_big_nohaplotig	CDS	36525445	36525585	.	-	0	Parent=comp142756_c0_seq1.mrna1;Target=comp142756_c0_seq1 150 290 +
Chr2	gffcl	locus	36562318	36563271	.	-	.	ID=RLOC_00016425;geneIDs=comp152314_c0_seq1.path1;transcripts=comp152314_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36562318	36563271	.	-	.	ID=comp152314_c0_seq1.mrna1;geneID=comp152314_c0_seq1.path1;Name=comp152314_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.7;matches=905;mismatches=41;indels=20;unknowns=0;Target=comp152314_c0_seq1 958 1 .;CDS_Target=comp152314_c0_seq1 133 59 .;locus=RLOC_00016425
Chr2	stalkie_big_nohaplotig	exon	36562318	36563271	93	-	.	Parent=comp152314_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36563140	36563213	.	-	0	Parent=comp152314_c0_seq1.mrna1
Chr2	gffcl	locus	36579477	36581701	.	+	.	ID=RLOC_00016426;geneIDs=comp151603_c0_seq1.path1;transcripts=comp151603_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36579477	36581701	.	+	.	ID=comp151603_c0_seq1.mrna1;geneID=comp151603_c0_seq1.path1;Name=comp151603_c0_seq1;Dir=antisensecoverage=98.8;identity=99.7;matches=962;mismatches=1;indels=2;unknowns=0;Target=comp151603_c0_seq1 275 520 .;locus=RLOC_00016426
Chr2	stalkie_big_nohaplotig	exon	36579477	36579681	100	+	.	Parent=comp151603_c0_seq1.mrna1;Target=comp151603_c0_seq1 759 963 -
Chr2	stalkie_big_nohaplotig	exon	36580942	36581701	99	+	.	Parent=comp151603_c0_seq1.mrna1;Target=comp151603_c0_seq1 1 758 -
Chr2	stalkie_big_nohaplotig	CDS	36581180	36581425	.	+	0	Parent=comp151603_c0_seq1.mrna1
Chr2	gffcl	locus	36624876	36685447	.	+	.	ID=RLOC_00016427;geneIDs=FBgn0001319.1.path1;transcripts=FBgn0001319.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36624876	36685447	.	+	.	ID=FBgn0001319.1.mrna1;geneID=FBgn0001319.1.path1;Name=FBgn0001319.1;Dir=sensecoverage=100.0;identity=99.8;matches=1743;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016427
Chr2	stalkie_big_nohaplotig	exon	36624876	36625153	100	+	.	Parent=FBgn0001319.1.mrna1;Target=FBgn0001319.1 1 278 +
Chr2	stalkie_big_nohaplotig	exon	36641617	36641834	100	+	.	Parent=FBgn0001319.1.mrna1;Target=FBgn0001319.1 279 496 +
Chr2	stalkie_big_nohaplotig	exon	36643905	36643960	100	+	.	Parent=FBgn0001319.1.mrna1;Target=FBgn0001319.1 497 552 +
Chr2	stalkie_big_nohaplotig	exon	36659183	36659256	100	+	.	Parent=FBgn0001319.1.mrna1;Target=FBgn0001319.1 553 626 +
Chr2	stalkie_big_nohaplotig	exon	36663403	36663471	100	+	.	Parent=FBgn0001319.1.mrna1;Target=FBgn0001319.1 627 695 +
Chr2	stalkie_big_nohaplotig	exon	36680288	36680369	100	+	.	Parent=FBgn0001319.1.mrna1;Target=FBgn0001319.1 696 777 +
Chr2	stalkie_big_nohaplotig	exon	36680426	36680606	99	+	.	Parent=FBgn0001319.1.mrna1;Target=FBgn0001319.1 778 958 +
Chr2	stalkie_big_nohaplotig	exon	36681229	36681510	100	+	.	Parent=FBgn0001319.1.mrna1;Target=FBgn0001319.1 959 1240 +
Chr2	stalkie_big_nohaplotig	exon	36681738	36681882	100	+	.	Parent=FBgn0001319.1.mrna1;Target=FBgn0001319.1 1241 1385 +
Chr2	stalkie_big_nohaplotig	exon	36681972	36682243	99	+	.	Parent=FBgn0001319.1.mrna1;Target=FBgn0001319.1 1386 1657 +
Chr2	stalkie_big_nohaplotig	exon	36685359	36685447	100	+	.	Parent=FBgn0001319.1.mrna1;Target=FBgn0001319.1 1658 1746 +
Chr2	stalkie_big_nohaplotig	CDS	36624876	36625153	.	+	0	Parent=FBgn0001319.1.mrna1;Target=FBgn0001319.1 1 278 +
Chr2	stalkie_big_nohaplotig	CDS	36641617	36641834	.	+	1	Parent=FBgn0001319.1.mrna1;Target=FBgn0001319.1 279 496 +
Chr2	stalkie_big_nohaplotig	CDS	36643905	36643960	.	+	2	Parent=FBgn0001319.1.mrna1;Target=FBgn0001319.1 497 552 +
Chr2	stalkie_big_nohaplotig	CDS	36659183	36659256	.	+	0	Parent=FBgn0001319.1.mrna1;Target=FBgn0001319.1 553 626 +
Chr2	stalkie_big_nohaplotig	CDS	36663403	36663471	.	+	1	Parent=FBgn0001319.1.mrna1;Target=FBgn0001319.1 627 695 +
Chr2	stalkie_big_nohaplotig	CDS	36680288	36680369	.	+	1	Parent=FBgn0001319.1.mrna1;Target=FBgn0001319.1 696 777 +
Chr2	stalkie_big_nohaplotig	CDS	36680426	36680606	.	+	0	Parent=FBgn0001319.1.mrna1;Target=FBgn0001319.1 778 958 +
Chr2	stalkie_big_nohaplotig	CDS	36681229	36681510	.	+	2	Parent=FBgn0001319.1.mrna1;Target=FBgn0001319.1 959 1240 +
Chr2	stalkie_big_nohaplotig	CDS	36681738	36681882	.	+	2	Parent=FBgn0001319.1.mrna1;Target=FBgn0001319.1 1241 1385 +
Chr2	stalkie_big_nohaplotig	CDS	36681972	36682243	.	+	1	Parent=FBgn0001319.1.mrna1;Target=FBgn0001319.1 1386 1657 +
Chr2	stalkie_big_nohaplotig	CDS	36685359	36685447	.	+	2	Parent=FBgn0001319.1.mrna1;Target=FBgn0001319.1 1658 1746 +
Chr2	gffcl	locus	36686493	36686965	.	-	.	ID=RLOC_00016428;geneIDs=comp149689_c0_seq1.path1;transcripts=comp149689_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36686493	36686965	.	-	.	ID=comp149689_c0_seq1.mrna1;geneID=comp149689_c0_seq1.path1;Name=comp149689_c0_seq1;Dir=indeterminatecoverage=95.9;identity=99.8;matches=472;mismatches=1;indels=0;unknowns=0;Target=comp149689_c0_seq1 493 21 .;CDS_Target=comp149689_c0_seq1 257 165 .;locus=RLOC_00016428
Chr2	stalkie_big_nohaplotig	exon	36686493	36686965	99	-	.	Parent=comp149689_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36686729	36686821	.	-	0	Parent=comp149689_c0_seq1.mrna1
Chr2	gffcl	locus	36687533	36688406	.	+	.	ID=RLOC_00016429;geneIDs=comp139074_c0_seq1.path1;transcripts=comp139074_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36687533	36688406	.	+	.	ID=comp139074_c0_seq1.mrna1;geneID=comp139074_c0_seq1.path1;Name=comp139074_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.7;matches=842;mismatches=18;indels=20;unknowns=0;Target=comp139074_c0_seq1 866 1 .;CDS_Target=comp139074_c0_seq1 324 283 .;locus=RLOC_00016429
Chr2	stalkie_big_nohaplotig	exon	36687533	36688406	95	+	.	Parent=comp139074_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36687825	36687866	.	+	0	Parent=comp139074_c0_seq1.mrna1
Chr2	gffcl	locus	36731521	36731871	.	-	.	ID=RLOC_00016430;geneIDs=comp539723_c0_seq1.path1;transcripts=comp539723_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36731521	36731871	.	-	.	ID=comp539723_c0_seq1.mrna1;geneID=comp539723_c0_seq1.path1;Name=comp539723_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=350;mismatches=1;indels=0;unknowns=0;Target=comp539723_c0_seq1 351 1 .;CDS_Target=comp539723_c0_seq1 244 146 .;locus=RLOC_00016430
Chr2	stalkie_big_nohaplotig	exon	36731521	36731871	99	-	.	Parent=comp539723_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36731628	36731726	.	-	0	Parent=comp539723_c0_seq1.mrna1
Chr2	gffcl	locus	36732594	36745532	.	-	.	ID=RLOC_00016431;geneIDs=FBgn0016684.1.path1;transcripts=FBgn0016684.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36732594	36745532	.	-	.	ID=FBgn0016684.1.mrna1;geneID=FBgn0016684.1.path1;Name=FBgn0016684.1;Dir=sensecoverage=100.0;identity=99.9;matches=1636;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016431
Chr2	stalkie_big_nohaplotig	exon	36732594	36732839	100	-	.	Parent=FBgn0016684.1.mrna1;Target=FBgn0016684.1 1393 1638 +
Chr2	stalkie_big_nohaplotig	exon	36732898	36733139	100	-	.	Parent=FBgn0016684.1.mrna1;Target=FBgn0016684.1 1151 1392 +
Chr2	stalkie_big_nohaplotig	exon	36733197	36733329	100	-	.	Parent=FBgn0016684.1.mrna1;Target=FBgn0016684.1 1018 1150 +
Chr2	stalkie_big_nohaplotig	exon	36733383	36733838	100	-	.	Parent=FBgn0016684.1.mrna1;Target=FBgn0016684.1 562 1017 +
Chr2	stalkie_big_nohaplotig	exon	36733897	36734142	100	-	.	Parent=FBgn0016684.1.mrna1;Target=FBgn0016684.1 316 561 +
Chr2	stalkie_big_nohaplotig	exon	36736231	36736526	99	-	.	Parent=FBgn0016684.1.mrna1;Target=FBgn0016684.1 20 315 +
Chr2	stalkie_big_nohaplotig	exon	36745514	36745532	100	-	.	Parent=FBgn0016684.1.mrna1;Target=FBgn0016684.1 1 19 +
Chr2	stalkie_big_nohaplotig	CDS	36732594	36732839	.	-	0	Parent=FBgn0016684.1.mrna1;Target=FBgn0016684.1 1393 1638 +
Chr2	stalkie_big_nohaplotig	CDS	36732898	36733139	.	-	2	Parent=FBgn0016684.1.mrna1;Target=FBgn0016684.1 1151 1392 +
Chr2	stalkie_big_nohaplotig	CDS	36733197	36733329	.	-	0	Parent=FBgn0016684.1.mrna1;Target=FBgn0016684.1 1018 1150 +
Chr2	stalkie_big_nohaplotig	CDS	36733383	36733838	.	-	0	Parent=FBgn0016684.1.mrna1;Target=FBgn0016684.1 562 1017 +
Chr2	stalkie_big_nohaplotig	CDS	36733897	36734142	.	-	0	Parent=FBgn0016684.1.mrna1;Target=FBgn0016684.1 316 561 +
Chr2	stalkie_big_nohaplotig	CDS	36736231	36736526	.	-	2	Parent=FBgn0016684.1.mrna1;Target=FBgn0016684.1 20 315 +
Chr2	stalkie_big_nohaplotig	CDS	36745514	36745532	.	-	0	Parent=FBgn0016684.1.mrna1;Target=FBgn0016684.1 1 19 +
Chr2	gffcl	locus	36749516	36752924	.	-	.	ID=RLOC_00016432;geneIDs=FBgn0033971.1.path1;transcripts=FBgn0033971.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36749516	36752924	.	-	.	ID=FBgn0033971.1.mrna1;geneID=FBgn0033971.1.path1;Name=FBgn0033971.1;Dir=sensecoverage=100.0;identity=99.8;matches=1557;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016432
Chr2	stalkie_big_nohaplotig	exon	36749516	36750886	99	-	.	Parent=FBgn0033971.1.mrna1;Target=FBgn0033971.1 190 1560 +
Chr2	stalkie_big_nohaplotig	exon	36752204	36752359	100	-	.	Parent=FBgn0033971.1.mrna1;Target=FBgn0033971.1 34 189 +
Chr2	stalkie_big_nohaplotig	exon	36752892	36752924	100	-	.	Parent=FBgn0033971.1.mrna1;Target=FBgn0033971.1 1 33 +
Chr2	stalkie_big_nohaplotig	CDS	36749516	36750886	.	-	0	Parent=FBgn0033971.1.mrna1;Target=FBgn0033971.1 190 1560 +
Chr2	stalkie_big_nohaplotig	CDS	36752204	36752359	.	-	0	Parent=FBgn0033971.1.mrna1;Target=FBgn0033971.1 34 189 +
Chr2	stalkie_big_nohaplotig	CDS	36752892	36752924	.	-	0	Parent=FBgn0033971.1.mrna1;Target=FBgn0033971.1 1 33 +
Chr2	gffcl	locus	36755548	36760119	.	-	.	ID=RLOC_00016433;geneIDs=FBgn0027783.1.path1;transcripts=FBgn0027783.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36755548	36760119	.	-	.	ID=FBgn0027783.1.mrna1;geneID=FBgn0027783.1.path1;Name=FBgn0027783.1;Dir=sensecoverage=100.0;identity=99.8;matches=3610;mismatches=8;indels=0;unknowns=0;locus=RLOC_00016433
Chr2	stalkie_big_nohaplotig	exon	36755548	36756985	100	-	.	Parent=FBgn0027783.1.mrna1;Target=FBgn0027783.1 2181 3618 +
Chr2	stalkie_big_nohaplotig	exon	36757045	36757238	100	-	.	Parent=FBgn0027783.1.mrna1;Target=FBgn0027783.1 1987 2180 +
Chr2	stalkie_big_nohaplotig	exon	36757748	36757870	100	-	.	Parent=FBgn0027783.1.mrna1;Target=FBgn0027783.1 1864 1986 +
Chr2	stalkie_big_nohaplotig	exon	36757938	36758084	98	-	.	Parent=FBgn0027783.1.mrna1;Target=FBgn0027783.1 1717 1863 +
Chr2	stalkie_big_nohaplotig	exon	36758169	36758596	99	-	.	Parent=FBgn0027783.1.mrna1;Target=FBgn0027783.1 1289 1716 +
Chr2	stalkie_big_nohaplotig	exon	36758657	36759386	99	-	.	Parent=FBgn0027783.1.mrna1;Target=FBgn0027783.1 559 1288 +
Chr2	stalkie_big_nohaplotig	exon	36759448	36759657	99	-	.	Parent=FBgn0027783.1.mrna1;Target=FBgn0027783.1 349 558 +
Chr2	stalkie_big_nohaplotig	exon	36759719	36759820	100	-	.	Parent=FBgn0027783.1.mrna1;Target=FBgn0027783.1 247 348 +
Chr2	stalkie_big_nohaplotig	exon	36759874	36760119	100	-	.	Parent=FBgn0027783.1.mrna1;Target=FBgn0027783.1 1 246 +
Chr2	stalkie_big_nohaplotig	CDS	36755548	36756985	.	-	1	Parent=FBgn0027783.1.mrna1;Target=FBgn0027783.1 2181 3618 +
Chr2	stalkie_big_nohaplotig	CDS	36757045	36757238	.	-	0	Parent=FBgn0027783.1.mrna1;Target=FBgn0027783.1 1987 2180 +
Chr2	stalkie_big_nohaplotig	CDS	36757748	36757870	.	-	0	Parent=FBgn0027783.1.mrna1;Target=FBgn0027783.1 1864 1986 +
Chr2	stalkie_big_nohaplotig	CDS	36757938	36758084	.	-	0	Parent=FBgn0027783.1.mrna1;Target=FBgn0027783.1 1717 1863 +
Chr2	stalkie_big_nohaplotig	CDS	36758169	36758596	.	-	2	Parent=FBgn0027783.1.mrna1;Target=FBgn0027783.1 1289 1716 +
Chr2	stalkie_big_nohaplotig	CDS	36758657	36759386	.	-	0	Parent=FBgn0027783.1.mrna1;Target=FBgn0027783.1 559 1288 +
Chr2	stalkie_big_nohaplotig	CDS	36759448	36759657	.	-	0	Parent=FBgn0027783.1.mrna1;Target=FBgn0027783.1 349 558 +
Chr2	stalkie_big_nohaplotig	CDS	36759719	36759820	.	-	0	Parent=FBgn0027783.1.mrna1;Target=FBgn0027783.1 247 348 +
Chr2	stalkie_big_nohaplotig	CDS	36759874	36760119	.	-	0	Parent=FBgn0027783.1.mrna1;Target=FBgn0027783.1 1 246 +
Chr2	gffcl	locus	36763139	36764219	.	-	.	ID=RLOC_00016434;geneIDs=FBgn0034743.1.path1;transcripts=FBgn0034743.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36763139	36764219	.	-	.	ID=FBgn0034743.1.mrna1;geneID=FBgn0034743.1.path1;Name=FBgn0034743.1;Dir=sensecoverage=100.0;identity=99.5;matches=439;mismatches=1;indels=1;unknowns=0;locus=RLOC_00016434
Chr2	stalkie_big_nohaplotig	exon	36763139	36763166	96	-	.	Parent=FBgn0034743.1.mrna1;Target=FBgn0034743.1 413 441 +
Chr2	stalkie_big_nohaplotig	exon	36763443	36763557	100	-	.	Parent=FBgn0034743.1.mrna1;Target=FBgn0034743.1 298 412 +
Chr2	stalkie_big_nohaplotig	exon	36763745	36763876	100	-	.	Parent=FBgn0034743.1.mrna1;Target=FBgn0034743.1 166 297 +
Chr2	stalkie_big_nohaplotig	exon	36763968	36764009	100	-	.	Parent=FBgn0034743.1.mrna1;Target=FBgn0034743.1 124 165 +
Chr2	stalkie_big_nohaplotig	exon	36764097	36764219	99	-	.	Parent=FBgn0034743.1.mrna1;Target=FBgn0034743.1 1 123 +
Chr2	stalkie_big_nohaplotig	CDS	36763139	36763166	.	-	2	Parent=FBgn0034743.1.mrna1;Target=FBgn0034743.1 413 441 +
Chr2	stalkie_big_nohaplotig	CDS	36763443	36763557	.	-	0	Parent=FBgn0034743.1.mrna1;Target=FBgn0034743.1 298 412 +
Chr2	stalkie_big_nohaplotig	CDS	36763745	36763876	.	-	0	Parent=FBgn0034743.1.mrna1;Target=FBgn0034743.1 166 297 +
Chr2	stalkie_big_nohaplotig	CDS	36763968	36764009	.	-	0	Parent=FBgn0034743.1.mrna1;Target=FBgn0034743.1 124 165 +
Chr2	stalkie_big_nohaplotig	CDS	36764097	36764219	.	-	0	Parent=FBgn0034743.1.mrna1;Target=FBgn0034743.1 1 123 +
Chr2	gffcl	locus	36766003	36772695	.	+	.	ID=RLOC_00016435;geneIDs=ORF15.path1;transcripts=ORF15.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36766003	36772695	.	+	.	ID=ORF15.mrna1;geneID=ORF15.path1;Name=ORF15;Dir=sensecoverage=100.0;identity=99.4;matches=4534;mismatches=26;indels=0;unknowns=0;locus=RLOC_00016435
Chr2	stalkie_big_nohaplotig	exon	36766003	36766237	100	+	.	Parent=ORF15.mrna1;Target=ORF15 1 235 +
Chr2	stalkie_big_nohaplotig	exon	36766400	36769428	99	+	.	Parent=ORF15.mrna1;Target=ORF15 236 3264 +
Chr2	stalkie_big_nohaplotig	exon	36769482	36769987	100	+	.	Parent=ORF15.mrna1;Target=ORF15 3265 3770 +
Chr2	stalkie_big_nohaplotig	exon	36771811	36772089	99	+	.	Parent=ORF15.mrna1;Target=ORF15 3771 4049 +
Chr2	stalkie_big_nohaplotig	exon	36772185	36772695	98	+	.	Parent=ORF15.mrna1;Target=ORF15 4050 4560 +
Chr2	stalkie_big_nohaplotig	CDS	36766003	36766237	.	+	0	Parent=ORF15.mrna1;Target=ORF15 1 235 +
Chr2	stalkie_big_nohaplotig	CDS	36766400	36769428	.	+	2	Parent=ORF15.mrna1;Target=ORF15 236 3264 +
Chr2	stalkie_big_nohaplotig	CDS	36769482	36769987	.	+	0	Parent=ORF15.mrna1;Target=ORF15 3265 3770 +
Chr2	stalkie_big_nohaplotig	CDS	36771811	36772089	.	+	1	Parent=ORF15.mrna1;Target=ORF15 3771 4049 +
Chr2	stalkie_big_nohaplotig	CDS	36772185	36772695	.	+	1	Parent=ORF15.mrna1;Target=ORF15 4050 4560 +
Chr2	gffcl	locus	36772698	36775405	.	+	.	ID=RLOC_00016436;geneIDs=comp152323_c0_seq1.path2,comp157384_c1_seq1.path1;transcripts=comp157384_c1_seq1.mrna1,comp152323_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	36772698	36775405	.	+	.	ID=comp157384_c1_seq1.mrna1;geneID=comp157384_c1_seq1.path1;Name=comp157384_c1_seq1;Dir=sensecoverage=100.0;identity=98.0;matches=1651;mismatches=14;indels=20;unknowns=0;locus=RLOC_00016436
Chr2	stalkie_big_nohaplotig	exon	36772698	36773154	95	+	.	Parent=comp157384_c1_seq1.mrna1;Target=comp157384_c1_seq1 1 472 +
Chr2	stalkie_big_nohaplotig	exon	36773285	36773382	100	+	.	Parent=comp157384_c1_seq1.mrna1;Target=comp157384_c1_seq1 473 570 +
Chr2	stalkie_big_nohaplotig	exon	36773640	36773724	100	+	.	Parent=comp157384_c1_seq1.mrna1;Target=comp157384_c1_seq1 571 655 +
Chr2	stalkie_big_nohaplotig	exon	36774381	36775405	98	+	.	Parent=comp157384_c1_seq1.mrna1;Target=comp157384_c1_seq1 656 1685 +
Chr2	stalkie_big_nohaplotig	CDS	36772699	36773154	.	+	0	Parent=comp157384_c1_seq1.mrna1;Target=comp157384_c1_seq1 2 472 +
Chr2	stalkie_big_nohaplotig	CDS	36773285	36773382	.	+	0	Parent=comp157384_c1_seq1.mrna1;Target=comp157384_c1_seq1 473 570 +
Chr2	stalkie_big_nohaplotig	CDS	36773640	36773643	.	+	1	Parent=comp157384_c1_seq1.mrna1;Target=comp157384_c1_seq1 571 574 +
Chr2	stalkie_big_nohaplotig	mRNA	36773947	36774402	.	+	.	ID=comp152323_c0_seq1.mrna2;geneID=comp152323_c0_seq1.path2;Name=comp152323_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=456;mismatches=0;indels=2;unknowns=0;Target=comp152323_c0_seq1 458 1 .;CDS_Target=comp152323_c0_seq1 407 312 .;locus=RLOC_00016436
Chr2	stalkie_big_nohaplotig	exon	36773947	36774402	99	+	.	Parent=comp152323_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	36774256	36774351	.	+	0	Parent=comp152323_c0_seq1.mrna2
Chr2	gffcl	locus	36777204	36778476	.	+	.	ID=RLOC_00016437;geneIDs=comp158766_c0_seq1.path1;transcripts=comp158766_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36777204	36778476	.	+	.	ID=comp158766_c0_seq1.mrna1;geneID=comp158766_c0_seq1.path1;Name=comp158766_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=1242;mismatches=15;indels=16;unknowns=0;Target=comp158766_c0_seq1 1257 1 .;CDS_Target=comp158766_c0_seq1 87 1 .;locus=RLOC_00016437
Chr2	stalkie_big_nohaplotig	exon	36777204	36778476	97	+	.	Parent=comp158766_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36777204	36777306	.	+	0	Parent=comp158766_c0_seq1.mrna1
Chr2	gffcl	locus	36794601	36795437	.	-	.	ID=RLOC_00016439;geneIDs=comp150347_c0_seq1.path1;transcripts=comp150347_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36794601	36795437	.	-	.	ID=comp150347_c0_seq1.mrna1;geneID=comp150347_c0_seq1.path1;Name=comp150347_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.6;matches=834;mismatches=3;indels=0;unknowns=0;Target=comp150347_c0_seq1 837 1 .;CDS_Target=comp150347_c0_seq1 80 3 .;locus=RLOC_00016439
Chr2	stalkie_big_nohaplotig	exon	36794601	36795437	99	-	.	Parent=comp150347_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36795358	36795435	.	-	0	Parent=comp150347_c0_seq1.mrna1
Chr2	gffcl	locus	36795812	36802805	.	-	.	ID=RLOC_00016440;geneIDs=FBgn0034232.1.path1;transcripts=FBgn0034232.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36795812	36802805	.	-	.	ID=FBgn0034232.1.mrna1;geneID=FBgn0034232.1.path1;Name=FBgn0034232.1;Dir=sensecoverage=100.0;identity=99.8;matches=542;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016440
Chr2	stalkie_big_nohaplotig	exon	36795812	36796005	99	-	.	Parent=FBgn0034232.1.mrna1;Target=FBgn0034232.1 350 543 +
Chr2	stalkie_big_nohaplotig	exon	36802402	36802610	100	-	.	Parent=FBgn0034232.1.mrna1;Target=FBgn0034232.1 141 349 +
Chr2	stalkie_big_nohaplotig	exon	36802666	36802805	100	-	.	Parent=FBgn0034232.1.mrna1;Target=FBgn0034232.1 1 140 +
Chr2	stalkie_big_nohaplotig	CDS	36795812	36796005	.	-	2	Parent=FBgn0034232.1.mrna1;Target=FBgn0034232.1 350 543 +
Chr2	stalkie_big_nohaplotig	CDS	36802402	36802610	.	-	1	Parent=FBgn0034232.1.mrna1;Target=FBgn0034232.1 141 349 +
Chr2	stalkie_big_nohaplotig	CDS	36802666	36802805	.	-	0	Parent=FBgn0034232.1.mrna1;Target=FBgn0034232.1 1 140 +
Chr2	gffcl	locus	36808237	36809477	.	-	.	ID=RLOC_00016442;geneIDs=FBgn0034229.1.path1;transcripts=FBgn0034229.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36808237	36809477	.	-	.	ID=FBgn0034229.1.mrna1;geneID=FBgn0034229.1.path1;Name=FBgn0034229.1;Dir=sensecoverage=100.0;identity=99.7;matches=1092;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016442
Chr2	stalkie_big_nohaplotig	exon	36808237	36808936	99	-	.	Parent=FBgn0034229.1.mrna1;Target=FBgn0034229.1 396 1095 +
Chr2	stalkie_big_nohaplotig	exon	36809020	36809228	100	-	.	Parent=FBgn0034229.1.mrna1;Target=FBgn0034229.1 187 395 +
Chr2	stalkie_big_nohaplotig	exon	36809292	36809477	100	-	.	Parent=FBgn0034229.1.mrna1;Target=FBgn0034229.1 1 186 +
Chr2	stalkie_big_nohaplotig	CDS	36808237	36808936	.	-	1	Parent=FBgn0034229.1.mrna1;Target=FBgn0034229.1 396 1095 +
Chr2	stalkie_big_nohaplotig	CDS	36809020	36809228	.	-	0	Parent=FBgn0034229.1.mrna1;Target=FBgn0034229.1 187 395 +
Chr2	stalkie_big_nohaplotig	CDS	36809292	36809477	.	-	0	Parent=FBgn0034229.1.mrna1;Target=FBgn0034229.1 1 186 +
Chr2	gffcl	locus	36818078	36819189	.	+	.	ID=RLOC_00016443;geneIDs=comp148099_c0_seq1.path1;transcripts=comp148099_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36818078	36819189	.	+	.	ID=comp148099_c0_seq1.mrna1;geneID=comp148099_c0_seq1.path1;Name=comp148099_c0_seq1;Dir=antisensecoverage=97.0;identity=99.0;matches=480;mismatches=5;indels=0;unknowns=0;locus=RLOC_00016443
Chr2	stalkie_big_nohaplotig	exon	36818078	36818303	97	+	.	Parent=comp148099_c0_seq1.mrna1;Target=comp148099_c0_seq1 261 486 -
Chr2	stalkie_big_nohaplotig	exon	36818931	36819189	100	+	.	Parent=comp148099_c0_seq1.mrna1;Target=comp148099_c0_seq1 2 260 -
Chr2	stalkie_big_nohaplotig	CDS	36818202	36818303	.	+	0	Parent=comp148099_c0_seq1.mrna1;Target=comp148099_c0_seq1 261 362 .
Chr2	stalkie_big_nohaplotig	CDS	36818931	36819074	.	+	0	Parent=comp148099_c0_seq1.mrna1;Target=comp148099_c0_seq1 117 260 .
Chr2	gffcl	locus	36824891	36832551	.	-	.	ID=RLOC_00016444;geneIDs=FBgn0262720.1.path1;transcripts=FBgn0262720.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36824891	36832551	.	-	.	ID=FBgn0262720.1.mrna1;geneID=FBgn0262720.1.path1;Name=FBgn0262720.1;Dir=sensecoverage=100.0;identity=99.9;matches=1501;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016444
Chr2	stalkie_big_nohaplotig	exon	36824891	36825767	100	-	.	Parent=FBgn0262720.1.mrna1;Target=FBgn0262720.1 627 1503 +
Chr2	stalkie_big_nohaplotig	exon	36826647	36826799	100	-	.	Parent=FBgn0262720.1.mrna1;Target=FBgn0262720.1 474 626 +
Chr2	stalkie_big_nohaplotig	exon	36826942	36827317	99	-	.	Parent=FBgn0262720.1.mrna1;Target=FBgn0262720.1 98 473 +
Chr2	stalkie_big_nohaplotig	exon	36832455	36832551	100	-	.	Parent=FBgn0262720.1.mrna1;Target=FBgn0262720.1 1 97 +
Chr2	stalkie_big_nohaplotig	CDS	36824891	36825767	.	-	1	Parent=FBgn0262720.1.mrna1;Target=FBgn0262720.1 627 1503 +
Chr2	stalkie_big_nohaplotig	CDS	36826647	36826799	.	-	1	Parent=FBgn0262720.1.mrna1;Target=FBgn0262720.1 474 626 +
Chr2	stalkie_big_nohaplotig	CDS	36826942	36827317	.	-	2	Parent=FBgn0262720.1.mrna1;Target=FBgn0262720.1 98 473 +
Chr2	stalkie_big_nohaplotig	CDS	36832455	36832551	.	-	0	Parent=FBgn0262720.1.mrna1;Target=FBgn0262720.1 1 97 +
Chr2	gffcl	locus	36841703	38185834	.	-	.	ID=RLOC_00016445;geneIDs=comp148221_c0_seq1.path1,comp158393_c1_seq1.path1;transcripts=comp158393_c1_seq1.mrna1,comp148221_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36841703	38185834	.	-	.	ID=comp158393_c1_seq1.mrna1;geneID=comp158393_c1_seq1.path1;Name=comp158393_c1_seq1;Dir=indeterminatecoverage=67.8;identity=94.0;matches=1186;mismatches=48;indels=28;unknowns=0;locus=RLOC_00016445
Chr2	stalkie_big_nohaplotig	exon	36841703	36841753	88	-	.	Parent=comp158393_c1_seq1.mrna1;Target=comp158393_c1_seq1 1355 1305 .
Chr2	stalkie_big_nohaplotig	exon	36843979	36843986	100	-	.	Parent=comp158393_c1_seq1.mrna1;Target=comp158393_c1_seq1 1299 1292 .
Chr2	stalkie_big_nohaplotig	exon	36853089	36853096	100	-	.	Parent=comp158393_c1_seq1.mrna1;Target=comp158393_c1_seq1 1284 1277 .
Chr2	stalkie_big_nohaplotig	exon	36973970	36973979	100	-	.	Parent=comp158393_c1_seq1.mrna1;Target=comp158393_c1_seq1 1217 1208 .
Chr2	stalkie_big_nohaplotig	exon	37217866	37217889	45	-	.	Parent=comp158393_c1_seq1.mrna1;Target=comp158393_c1_seq1 1206 1156 .
Chr2	stalkie_big_nohaplotig	exon	37227721	37227725	100	-	.	Parent=comp158393_c1_seq1.mrna1;Target=comp158393_c1_seq1 1155 1151 .
Chr2	stalkie_big_nohaplotig	exon	37232884	37232887	100	-	.	Parent=comp158393_c1_seq1.mrna1;Target=comp158393_c1_seq1 1150 1147 .
Chr2	stalkie_big_nohaplotig	exon	37239317	37239330	78	-	.	Parent=comp158393_c1_seq1.mrna1;Target=comp158393_c1_seq1 1146 1133 .
Chr2	stalkie_big_nohaplotig	exon	37249083	37249084	100	-	.	Parent=comp158393_c1_seq1.mrna1;Target=comp158393_c1_seq1 1132 1131 .
Chr2	stalkie_big_nohaplotig	exon	38066099	38066201	81	-	.	Parent=comp158393_c1_seq1.mrna1;Target=comp158393_c1_seq1 1130 1029 .
Chr2	stalkie_big_nohaplotig	exon	38071774	38071782	100	-	.	Parent=comp158393_c1_seq1.mrna1;Target=comp158393_c1_seq1 1028 1020 .
Chr2	stalkie_big_nohaplotig	exon	38079067	38079069	100	-	.	Parent=comp158393_c1_seq1.mrna1;Target=comp158393_c1_seq1 1019 1017 .
Chr2	stalkie_big_nohaplotig	exon	38090273	38090274	100	-	.	Parent=comp158393_c1_seq1.mrna1;Target=comp158393_c1_seq1 1016 1015 .
Chr2	stalkie_big_nohaplotig	exon	38113889	38114008	85	-	.	Parent=comp158393_c1_seq1.mrna1;Target=comp158393_c1_seq1 1014 895 .
Chr2	stalkie_big_nohaplotig	exon	38184965	38185834	99	-	.	Parent=comp158393_c1_seq1.mrna1;Target=comp158393_c1_seq1 894 25 .
Chr2	stalkie_big_nohaplotig	CDS	38071778	38071782	.	-	2	Parent=comp158393_c1_seq1.mrna1;Target=comp158393_c1_seq1 1024 1020 .
Chr2	stalkie_big_nohaplotig	CDS	38079067	38079069	.	-	2	Parent=comp158393_c1_seq1.mrna1;Target=comp158393_c1_seq1 1019 1017 .
Chr2	stalkie_big_nohaplotig	CDS	38090273	38090274	.	-	1	Parent=comp158393_c1_seq1.mrna1;Target=comp158393_c1_seq1 1016 1015 .
Chr2	stalkie_big_nohaplotig	CDS	38113889	38114008	.	-	1	Parent=comp158393_c1_seq1.mrna1;Target=comp158393_c1_seq1 1014 895 .
Chr2	stalkie_big_nohaplotig	CDS	38184965	38185086	.	-	0	Parent=comp158393_c1_seq1.mrna1;Target=comp158393_c1_seq1 894 773 .
Chr2	stalkie_big_nohaplotig	mRNA	37227404	37227904	.	-	.	ID=comp148221_c0_seq1.mrna1;geneID=comp148221_c0_seq1.path1;Name=comp148221_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=500;mismatches=1;indels=0;unknowns=0;Target=comp148221_c0_seq1 501 1 .;CDS_Target=comp148221_c0_seq1 83 3 .;locus=RLOC_00016445
Chr2	stalkie_big_nohaplotig	exon	37227404	37227904	99	-	.	Parent=comp148221_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37227822	37227902	.	-	0	Parent=comp148221_c0_seq1.mrna1
Chr2	gffcl	locus	36846806	36848951	.	-	.	ID=RLOC_00016446;geneIDs=FBgn0050104.1.path1;transcripts=FBgn0050104.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36846806	36848951	.	-	.	ID=FBgn0050104.1.mrna1;geneID=FBgn0050104.1.path1;Name=FBgn0050104.1;Dir=sensecoverage=99.5;identity=99.8;matches=1759;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016446
Chr2	stalkie_big_nohaplotig	exon	36846806	36847356	100	-	.	Parent=FBgn0050104.1.mrna1;Target=FBgn0050104.1 1220 1770 +
Chr2	stalkie_big_nohaplotig	exon	36847418	36847718	99	-	.	Parent=FBgn0050104.1.mrna1;Target=FBgn0050104.1 919 1219 +
Chr2	stalkie_big_nohaplotig	exon	36847792	36848068	100	-	.	Parent=FBgn0050104.1.mrna1;Target=FBgn0050104.1 642 918 +
Chr2	stalkie_big_nohaplotig	exon	36848141	36848397	100	-	.	Parent=FBgn0050104.1.mrna1;Target=FBgn0050104.1 385 641 +
Chr2	stalkie_big_nohaplotig	exon	36848467	36848617	100	-	.	Parent=FBgn0050104.1.mrna1;Target=FBgn0050104.1 234 384 +
Chr2	stalkie_big_nohaplotig	exon	36848727	36848951	99	-	.	Parent=FBgn0050104.1.mrna1;Target=FBgn0050104.1 9 233 +
Chr2	stalkie_big_nohaplotig	CDS	36846806	36847356	.	-	2	Parent=FBgn0050104.1.mrna1;Target=FBgn0050104.1 1220 1770 +
Chr2	stalkie_big_nohaplotig	CDS	36847418	36847718	.	-	0	Parent=FBgn0050104.1.mrna1;Target=FBgn0050104.1 919 1219 +
Chr2	stalkie_big_nohaplotig	CDS	36847792	36848068	.	-	1	Parent=FBgn0050104.1.mrna1;Target=FBgn0050104.1 642 918 +
Chr2	stalkie_big_nohaplotig	CDS	36848141	36848397	.	-	0	Parent=FBgn0050104.1.mrna1;Target=FBgn0050104.1 385 641 +
Chr2	stalkie_big_nohaplotig	CDS	36848467	36848617	.	-	1	Parent=FBgn0050104.1.mrna1;Target=FBgn0050104.1 234 384 +
Chr2	stalkie_big_nohaplotig	CDS	36848727	36848950	.	-	0	Parent=FBgn0050104.1.mrna1;Target=FBgn0050104.1 10 233 +
Chr2	gffcl	locus	36870122	36877321	.	+	.	ID=RLOC_00016447;geneIDs=FBgn0034232.1.path2;transcripts=FBgn0034232.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	36870122	36877321	.	+	.	ID=FBgn0034232.1.mrna2;geneID=FBgn0034232.1.path2;Name=FBgn0034232.1;Dir=sensecoverage=100.0;identity=99.8;matches=542;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016447
Chr2	stalkie_big_nohaplotig	exon	36870122	36870261	100	+	.	Parent=FBgn0034232.1.mrna2;Target=FBgn0034232.1 1 140 +
Chr2	stalkie_big_nohaplotig	exon	36870317	36870525	100	+	.	Parent=FBgn0034232.1.mrna2;Target=FBgn0034232.1 141 349 +
Chr2	stalkie_big_nohaplotig	exon	36877128	36877321	99	+	.	Parent=FBgn0034232.1.mrna2;Target=FBgn0034232.1 350 543 +
Chr2	stalkie_big_nohaplotig	CDS	36870122	36870261	.	+	0	Parent=FBgn0034232.1.mrna2;Target=FBgn0034232.1 1 140 +
Chr2	stalkie_big_nohaplotig	CDS	36870317	36870525	.	+	1	Parent=FBgn0034232.1.mrna2;Target=FBgn0034232.1 141 349 +
Chr2	stalkie_big_nohaplotig	CDS	36877128	36877321	.	+	2	Parent=FBgn0034232.1.mrna2;Target=FBgn0034232.1 350 543 +
Chr2	gffcl	locus	36878880	36904248	.	-	.	ID=RLOC_00016448;geneIDs=FBgn0263197.1.path1;transcripts=FBgn0263197.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36878880	36904248	.	-	.	ID=FBgn0263197.1.mrna1;geneID=FBgn0263197.1.path1;Name=FBgn0263197.1;Dir=sensecoverage=98.3;identity=99.8;matches=5057;mismatches=9;indels=1;unknowns=0;locus=RLOC_00016448
Chr2	stalkie_big_nohaplotig	exon	36878880	36878996	99	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 5040 5157 +
Chr2	stalkie_big_nohaplotig	exon	36879078	36879360	100	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 4757 5039 +
Chr2	stalkie_big_nohaplotig	exon	36884377	36884562	100	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 4571 4756 +
Chr2	stalkie_big_nohaplotig	exon	36885877	36885981	100	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 4466 4570 +
Chr2	stalkie_big_nohaplotig	exon	36886547	36886618	100	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 4394 4465 +
Chr2	stalkie_big_nohaplotig	exon	36887866	36887940	100	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 4319 4393 +
Chr2	stalkie_big_nohaplotig	exon	36888125	36888317	100	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 4126 4318 +
Chr2	stalkie_big_nohaplotig	exon	36888622	36888858	100	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 3889 4125 +
Chr2	stalkie_big_nohaplotig	exon	36888933	36889445	99	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 3376 3888 +
Chr2	stalkie_big_nohaplotig	exon	36889505	36890572	99	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 2308 3375 +
Chr2	stalkie_big_nohaplotig	exon	36892292	36892438	100	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 2161 2307 +
Chr2	stalkie_big_nohaplotig	exon	36892894	36892995	100	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 2059 2160 +
Chr2	stalkie_big_nohaplotig	exon	36894778	36894917	100	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 1919 2058 +
Chr2	stalkie_big_nohaplotig	exon	36894984	36895183	99	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 1719 1918 +
Chr2	stalkie_big_nohaplotig	exon	36895692	36895821	100	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 1589 1718 +
Chr2	stalkie_big_nohaplotig	exon	36895895	36896038	99	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 1445 1588 +
Chr2	stalkie_big_nohaplotig	exon	36896243	36896305	100	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 1382 1444 +
Chr2	stalkie_big_nohaplotig	exon	36896642	36896782	100	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 1241 1381 +
Chr2	stalkie_big_nohaplotig	exon	36897793	36897903	99	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 1130 1240 +
Chr2	stalkie_big_nohaplotig	exon	36900492	36900641	100	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 980 1129 +
Chr2	stalkie_big_nohaplotig	exon	36903078	36903178	100	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 879 979 +
Chr2	stalkie_big_nohaplotig	exon	36903244	36903494	99	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 628 878 +
Chr2	stalkie_big_nohaplotig	exon	36903551	36903683	100	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 495 627 +
Chr2	stalkie_big_nohaplotig	exon	36903752	36903840	100	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 406 494 +
Chr2	stalkie_big_nohaplotig	exon	36903934	36904248	99	-	.	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 91 405 +
Chr2	stalkie_big_nohaplotig	CDS	36878880	36878996	.	-	1	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 5040 5157 +
Chr2	stalkie_big_nohaplotig	CDS	36879078	36879360	.	-	2	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 4757 5039 +
Chr2	stalkie_big_nohaplotig	CDS	36884377	36884562	.	-	2	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 4571 4756 +
Chr2	stalkie_big_nohaplotig	CDS	36885877	36885981	.	-	2	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 4466 4570 +
Chr2	stalkie_big_nohaplotig	CDS	36886547	36886618	.	-	2	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 4394 4465 +
Chr2	stalkie_big_nohaplotig	CDS	36887866	36887940	.	-	2	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 4319 4393 +
Chr2	stalkie_big_nohaplotig	CDS	36888125	36888317	.	-	0	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 4126 4318 +
Chr2	stalkie_big_nohaplotig	CDS	36888622	36888858	.	-	0	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 3889 4125 +
Chr2	stalkie_big_nohaplotig	CDS	36888933	36889445	.	-	0	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 3376 3888 +
Chr2	stalkie_big_nohaplotig	CDS	36889505	36890572	.	-	0	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 2308 3375 +
Chr2	stalkie_big_nohaplotig	CDS	36892292	36892438	.	-	0	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 2161 2307 +
Chr2	stalkie_big_nohaplotig	CDS	36892894	36892995	.	-	0	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 2059 2160 +
Chr2	stalkie_big_nohaplotig	CDS	36894778	36894917	.	-	2	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 1919 2058 +
Chr2	stalkie_big_nohaplotig	CDS	36894984	36895183	.	-	1	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 1719 1918 +
Chr2	stalkie_big_nohaplotig	CDS	36895692	36895821	.	-	2	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 1589 1718 +
Chr2	stalkie_big_nohaplotig	CDS	36895895	36896038	.	-	2	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 1445 1588 +
Chr2	stalkie_big_nohaplotig	CDS	36896243	36896305	.	-	2	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 1382 1444 +
Chr2	stalkie_big_nohaplotig	CDS	36896642	36896782	.	-	2	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 1241 1381 +
Chr2	stalkie_big_nohaplotig	CDS	36897793	36897903	.	-	2	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 1130 1240 +
Chr2	stalkie_big_nohaplotig	CDS	36900492	36900641	.	-	2	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 980 1129 +
Chr2	stalkie_big_nohaplotig	CDS	36903078	36903178	.	-	1	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 879 979 +
Chr2	stalkie_big_nohaplotig	CDS	36903244	36903494	.	-	0	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 628 878 +
Chr2	stalkie_big_nohaplotig	CDS	36903551	36903683	.	-	1	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 495 627 +
Chr2	stalkie_big_nohaplotig	CDS	36903752	36903840	.	-	0	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 406 494 +
Chr2	stalkie_big_nohaplotig	CDS	36903934	36904248	.	-	0	Parent=FBgn0263197.1.mrna1;Target=FBgn0263197.1 91 405 +
Chr2	gffcl	locus	36879756	36880512	.	+	.	ID=RLOC_00016449;geneIDs=comp151105_c1_seq1.path1;transcripts=comp151105_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36879756	36880512	.	+	.	ID=comp151105_c1_seq1.mrna1;geneID=comp151105_c1_seq1.path1;Name=comp151105_c1_seq1;Dir=indeterminatecoverage=100.0;identity=95.5;matches=723;mismatches=0;indels=34;unknowns=0;Target=comp151105_c1_seq1 723 1 .;CDS_Target=comp151105_c1_seq1 357 268 .;locus=RLOC_00016449
Chr2	stalkie_big_nohaplotig	exon	36879756	36880512	95	+	.	Parent=comp151105_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36880057	36880146	.	+	0	Parent=comp151105_c1_seq1.mrna1
Chr2	gffcl	locus	36908395	38692813	.	+	.	ID=RLOC_00016450;geneIDs=comp118326_c0_seq1.path1;transcripts=comp118326_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36908395	38692813	.	+	.	ID=comp118326_c0_seq1.mrna1;geneID=comp118326_c0_seq1.path1;Name=comp118326_c0_seq1;Dir=antisensecoverage=76.4;identity=99.2;matches=724;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016450
Chr2	stalkie_big_nohaplotig	exon	36908395	36908403	100	+	.	Parent=comp118326_c0_seq1.mrna1;Target=comp118326_c0_seq1 724 732 -
Chr2	stalkie_big_nohaplotig	exon	36916353	36916356	100	+	.	Parent=comp118326_c0_seq1.mrna1;Target=comp118326_c0_seq1 720 723 -
Chr2	stalkie_big_nohaplotig	exon	36917450	36917453	100	+	.	Parent=comp118326_c0_seq1.mrna1;Target=comp118326_c0_seq1 716 719 -
Chr2	stalkie_big_nohaplotig	exon	38691563	38691729	96	+	.	Parent=comp118326_c0_seq1.mrna1;Target=comp118326_c0_seq1 549 715 -
Chr2	stalkie_big_nohaplotig	exon	38692268	38692813	100	+	.	Parent=comp118326_c0_seq1.mrna1;Target=comp118326_c0_seq1 3 548 -
Chr2	stalkie_big_nohaplotig	CDS	36908397	36908403	.	+	0	Parent=comp118326_c0_seq1.mrna1;Target=comp118326_c0_seq1 724 730 .
Chr2	stalkie_big_nohaplotig	CDS	36916353	36916356	.	+	2	Parent=comp118326_c0_seq1.mrna1;Target=comp118326_c0_seq1 720 723 .
Chr2	stalkie_big_nohaplotig	CDS	36917450	36917453	.	+	1	Parent=comp118326_c0_seq1.mrna1;Target=comp118326_c0_seq1 716 719 .
Chr2	stalkie_big_nohaplotig	CDS	38691563	38691700	.	+	0	Parent=comp118326_c0_seq1.mrna1;Target=comp118326_c0_seq1 578 715 .
Chr2	gffcl	locus	36946207	36949754	.	-	.	ID=RLOC_00016452;geneIDs=comp162125_c1_seq1.path1;transcripts=comp162125_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36946207	36949754	.	-	.	ID=comp162125_c1_seq1.mrna1;geneID=comp162125_c1_seq1.path1;Name=comp162125_c1_seq1;Dir=indeterminatecoverage=99.5;identity=98.2;matches=3499;mismatches=37;indels=26;unknowns=0;Target=comp162125_c1_seq1 3568 19 .;CDS_Target=comp162125_c1_seq1 642 520 .;locus=RLOC_00016452
Chr2	stalkie_big_nohaplotig	exon	36946207	36949754	98	-	.	Parent=comp162125_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36949124	36949246	.	-	0	Parent=comp162125_c1_seq1.mrna1
Chr2	gffcl	locus	36950215	36953631	.	-	.	ID=RLOC_00016453;geneIDs=FBgn0034723.1.path1;transcripts=FBgn0034723.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36950215	36953631	.	-	.	ID=FBgn0034723.1.mrna1;geneID=FBgn0034723.1.path1;Name=FBgn0034723.1;Dir=sensecoverage=100.0;identity=99.7;matches=1529;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016453
Chr2	stalkie_big_nohaplotig	exon	36950215	36950369	100	-	.	Parent=FBgn0034723.1.mrna1;Target=FBgn0034723.1 1379 1533 +
Chr2	stalkie_big_nohaplotig	exon	36950438	36950627	100	-	.	Parent=FBgn0034723.1.mrna1;Target=FBgn0034723.1 1189 1378 +
Chr2	stalkie_big_nohaplotig	exon	36950967	36951128	100	-	.	Parent=FBgn0034723.1.mrna1;Target=FBgn0034723.1 1027 1188 +
Chr2	stalkie_big_nohaplotig	exon	36951289	36951684	99	-	.	Parent=FBgn0034723.1.mrna1;Target=FBgn0034723.1 631 1026 +
Chr2	stalkie_big_nohaplotig	exon	36951749	36952071	99	-	.	Parent=FBgn0034723.1.mrna1;Target=FBgn0034723.1 308 630 +
Chr2	stalkie_big_nohaplotig	exon	36953249	36953479	100	-	.	Parent=FBgn0034723.1.mrna1;Target=FBgn0034723.1 77 307 +
Chr2	stalkie_big_nohaplotig	exon	36953556	36953631	100	-	.	Parent=FBgn0034723.1.mrna1;Target=FBgn0034723.1 1 76 +
Chr2	stalkie_big_nohaplotig	CDS	36950215	36950369	.	-	2	Parent=FBgn0034723.1.mrna1;Target=FBgn0034723.1 1379 1533 +
Chr2	stalkie_big_nohaplotig	CDS	36950438	36950627	.	-	0	Parent=FBgn0034723.1.mrna1;Target=FBgn0034723.1 1189 1378 +
Chr2	stalkie_big_nohaplotig	CDS	36950967	36951128	.	-	0	Parent=FBgn0034723.1.mrna1;Target=FBgn0034723.1 1027 1188 +
Chr2	stalkie_big_nohaplotig	CDS	36951289	36951684	.	-	0	Parent=FBgn0034723.1.mrna1;Target=FBgn0034723.1 631 1026 +
Chr2	stalkie_big_nohaplotig	CDS	36951749	36952071	.	-	2	Parent=FBgn0034723.1.mrna1;Target=FBgn0034723.1 308 630 +
Chr2	stalkie_big_nohaplotig	CDS	36953249	36953479	.	-	2	Parent=FBgn0034723.1.mrna1;Target=FBgn0034723.1 77 307 +
Chr2	stalkie_big_nohaplotig	CDS	36953556	36953631	.	-	0	Parent=FBgn0034723.1.mrna1;Target=FBgn0034723.1 1 76 +
Chr2	gffcl	locus	36956724	36958986	.	+	.	ID=RLOC_00016454;geneIDs=FBgn0029175.1.path1;transcripts=FBgn0029175.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36956724	36958986	.	+	.	ID=FBgn0029175.1.mrna1;geneID=FBgn0029175.1.path1;Name=FBgn0029175.1;Dir=sensecoverage=100.0;identity=98.8;matches=2123;mismatches=4;indels=21;unknowns=0;locus=RLOC_00016454
Chr2	stalkie_big_nohaplotig	exon	36956724	36958191	98	+	.	Parent=FBgn0029175.1.mrna1;Target=FBgn0029175.1 1 1489 +
Chr2	stalkie_big_nohaplotig	exon	36958255	36958414	100	+	.	Parent=FBgn0029175.1.mrna1;Target=FBgn0029175.1 1490 1649 +
Chr2	stalkie_big_nohaplotig	exon	36958488	36958986	100	+	.	Parent=FBgn0029175.1.mrna1;Target=FBgn0029175.1 1650 2148 +
Chr2	stalkie_big_nohaplotig	CDS	36956724	36958191	.	+	0	Parent=FBgn0029175.1.mrna1;Target=FBgn0029175.1 1 1489 +
Chr2	stalkie_big_nohaplotig	CDS	36958255	36958414	.	+	2	Parent=FBgn0029175.1.mrna1;Target=FBgn0029175.1 1490 1649 +
Chr2	stalkie_big_nohaplotig	CDS	36958488	36958986	.	+	1	Parent=FBgn0029175.1.mrna1;Target=FBgn0029175.1 1650 2148 +
Chr2	gffcl	locus	36959601	36960768	.	-	.	ID=RLOC_00016455;geneIDs=FBgn0034451.1.path1;transcripts=FBgn0034451.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36959601	36960768	.	-	.	ID=FBgn0034451.1.mrna1;geneID=FBgn0034451.1.path1;Name=FBgn0034451.1;Dir=sensecoverage=100.0;identity=99.9;matches=755;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016455
Chr2	stalkie_big_nohaplotig	exon	36959601	36959715	100	-	.	Parent=FBgn0034451.1.mrna1;Target=FBgn0034451.1 642 756 +
Chr2	stalkie_big_nohaplotig	exon	36960015	36960136	100	-	.	Parent=FBgn0034451.1.mrna1;Target=FBgn0034451.1 520 641 +
Chr2	stalkie_big_nohaplotig	exon	36960195	36960560	99	-	.	Parent=FBgn0034451.1.mrna1;Target=FBgn0034451.1 154 519 +
Chr2	stalkie_big_nohaplotig	exon	36960616	36960768	100	-	.	Parent=FBgn0034451.1.mrna1;Target=FBgn0034451.1 1 153 +
Chr2	stalkie_big_nohaplotig	CDS	36959601	36959715	.	-	1	Parent=FBgn0034451.1.mrna1;Target=FBgn0034451.1 642 756 +
Chr2	stalkie_big_nohaplotig	CDS	36960015	36960136	.	-	0	Parent=FBgn0034451.1.mrna1;Target=FBgn0034451.1 520 641 +
Chr2	stalkie_big_nohaplotig	CDS	36960195	36960560	.	-	0	Parent=FBgn0034451.1.mrna1;Target=FBgn0034451.1 154 519 +
Chr2	stalkie_big_nohaplotig	CDS	36960616	36960768	.	-	0	Parent=FBgn0034451.1.mrna1;Target=FBgn0034451.1 1 153 +
Chr2	gffcl	locus	36967438	36968263	.	-	.	ID=RLOC_00016457;geneIDs=FBgn0033551.3.path1;transcripts=FBgn0033551.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36967438	36968263	.	-	.	ID=FBgn0033551.3.mrna1;geneID=FBgn0033551.3.path1;Name=FBgn0033551.3;Dir=sensecoverage=100.0;identity=100.0;matches=630;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016457
Chr2	stalkie_big_nohaplotig	exon	36967438	36967516	100	-	.	Parent=FBgn0033551.3.mrna1;Target=FBgn0033551.3 552 630 +
Chr2	stalkie_big_nohaplotig	exon	36967586	36967674	100	-	.	Parent=FBgn0033551.3.mrna1;Target=FBgn0033551.3 463 551 +
Chr2	stalkie_big_nohaplotig	exon	36967750	36968058	100	-	.	Parent=FBgn0033551.3.mrna1;Target=FBgn0033551.3 154 462 +
Chr2	stalkie_big_nohaplotig	exon	36968111	36968263	100	-	.	Parent=FBgn0033551.3.mrna1;Target=FBgn0033551.3 1 153 +
Chr2	stalkie_big_nohaplotig	CDS	36967438	36967516	.	-	1	Parent=FBgn0033551.3.mrna1;Target=FBgn0033551.3 552 630 +
Chr2	stalkie_big_nohaplotig	CDS	36967586	36967674	.	-	0	Parent=FBgn0033551.3.mrna1;Target=FBgn0033551.3 463 551 +
Chr2	stalkie_big_nohaplotig	CDS	36967750	36968058	.	-	0	Parent=FBgn0033551.3.mrna1;Target=FBgn0033551.3 154 462 +
Chr2	stalkie_big_nohaplotig	CDS	36968111	36968263	.	-	0	Parent=FBgn0033551.3.mrna1;Target=FBgn0033551.3 1 153 +
Chr2	gffcl	locus	36970462	36975053	.	+	.	ID=RLOC_00016458;geneIDs=FBgn0086898.path1;transcripts=FBgn0086898.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36970462	36975053	.	+	.	ID=FBgn0086898.mrna1;geneID=FBgn0086898.path1;Name=FBgn0086898;Dir=sensecoverage=100.0;identity=99.6;matches=1350;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016458
Chr2	stalkie_big_nohaplotig	exon	36970462	36970502	97	+	.	Parent=FBgn0086898.mrna1;Target=FBgn0086898 1 41 +
Chr2	stalkie_big_nohaplotig	exon	36972852	36972915	100	+	.	Parent=FBgn0086898.mrna1;Target=FBgn0086898 42 105 +
Chr2	stalkie_big_nohaplotig	exon	36973671	36974039	98	+	.	Parent=FBgn0086898.mrna1;Target=FBgn0086898 106 474 +
Chr2	stalkie_big_nohaplotig	exon	36974104	36974395	100	+	.	Parent=FBgn0086898.mrna1;Target=FBgn0086898 475 766 +
Chr2	stalkie_big_nohaplotig	exon	36974464	36975053	99	+	.	Parent=FBgn0086898.mrna1;Target=FBgn0086898 767 1356 +
Chr2	stalkie_big_nohaplotig	CDS	36970489	36970502	.	+	0	Parent=FBgn0086898.mrna1;Target=FBgn0086898 28 41 +
Chr2	stalkie_big_nohaplotig	CDS	36972852	36972915	.	+	1	Parent=FBgn0086898.mrna1;Target=FBgn0086898 42 105 +
Chr2	stalkie_big_nohaplotig	CDS	36973671	36974039	.	+	0	Parent=FBgn0086898.mrna1;Target=FBgn0086898 106 474 +
Chr2	stalkie_big_nohaplotig	CDS	36974104	36974395	.	+	0	Parent=FBgn0086898.mrna1;Target=FBgn0086898 475 766 +
Chr2	stalkie_big_nohaplotig	CDS	36974464	36975053	.	+	2	Parent=FBgn0086898.mrna1;Target=FBgn0086898 767 1356 +
Chr2	gffcl	locus	36975252	36980971	.	-	.	ID=RLOC_00016459;geneIDs=FBgn0025878.1.path1;transcripts=FBgn0025878.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36975252	36980971	.	-	.	ID=FBgn0025878.1.mrna1;geneID=FBgn0025878.1.path1;Name=FBgn0025878.1;Dir=sensecoverage=100.0;identity=99.8;matches=1452;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016459
Chr2	stalkie_big_nohaplotig	exon	36975252	36975433	99	-	.	Parent=FBgn0025878.1.mrna1;Target=FBgn0025878.1 1274 1455 +
Chr2	stalkie_big_nohaplotig	exon	36975548	36975682	100	-	.	Parent=FBgn0025878.1.mrna1;Target=FBgn0025878.1 1139 1273 +
Chr2	stalkie_big_nohaplotig	exon	36976927	36976998	100	-	.	Parent=FBgn0025878.1.mrna1;Target=FBgn0025878.1 1067 1138 +
Chr2	stalkie_big_nohaplotig	exon	36977059	36977502	99	-	.	Parent=FBgn0025878.1.mrna1;Target=FBgn0025878.1 623 1066 +
Chr2	stalkie_big_nohaplotig	exon	36977594	36978070	99	-	.	Parent=FBgn0025878.1.mrna1;Target=FBgn0025878.1 146 622 +
Chr2	stalkie_big_nohaplotig	exon	36980827	36980971	100	-	.	Parent=FBgn0025878.1.mrna1;Target=FBgn0025878.1 1 145 +
Chr2	stalkie_big_nohaplotig	CDS	36975252	36975433	.	-	2	Parent=FBgn0025878.1.mrna1;Target=FBgn0025878.1 1274 1455 +
Chr2	stalkie_big_nohaplotig	CDS	36975548	36975682	.	-	2	Parent=FBgn0025878.1.mrna1;Target=FBgn0025878.1 1139 1273 +
Chr2	stalkie_big_nohaplotig	CDS	36976927	36976998	.	-	2	Parent=FBgn0025878.1.mrna1;Target=FBgn0025878.1 1067 1138 +
Chr2	stalkie_big_nohaplotig	CDS	36977059	36977502	.	-	2	Parent=FBgn0025878.1.mrna1;Target=FBgn0025878.1 623 1066 +
Chr2	stalkie_big_nohaplotig	CDS	36977594	36978070	.	-	2	Parent=FBgn0025878.1.mrna1;Target=FBgn0025878.1 146 622 +
Chr2	stalkie_big_nohaplotig	CDS	36980827	36980971	.	-	0	Parent=FBgn0025878.1.mrna1;Target=FBgn0025878.1 1 145 +
Chr2	gffcl	locus	36989279	36990182	.	-	.	ID=RLOC_00016460;geneIDs=FBgn0029134.1.path1;transcripts=FBgn0029134.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36989279	36990182	.	-	.	ID=FBgn0029134.1.mrna1;geneID=FBgn0029134.1.path1;Name=FBgn0029134.1;Dir=sensecoverage=100.0;identity=99.6;matches=843;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016460
Chr2	stalkie_big_nohaplotig	exon	36989279	36989962	99	-	.	Parent=FBgn0029134.1.mrna1;Target=FBgn0029134.1 163 846 +
Chr2	stalkie_big_nohaplotig	exon	36990021	36990182	99	-	.	Parent=FBgn0029134.1.mrna1;Target=FBgn0029134.1 1 162 +
Chr2	stalkie_big_nohaplotig	CDS	36989279	36989962	.	-	0	Parent=FBgn0029134.1.mrna1;Target=FBgn0029134.1 163 846 +
Chr2	stalkie_big_nohaplotig	CDS	36990021	36990182	.	-	0	Parent=FBgn0029134.1.mrna1;Target=FBgn0029134.1 1 162 +
Chr2	gffcl	locus	36992164	36992646	.	-	.	ID=RLOC_00016461;geneIDs=comp49108_c0_seq1.path1;transcripts=comp49108_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36992164	36992646	.	-	.	ID=comp49108_c0_seq1.mrna1;geneID=comp49108_c0_seq1.path1;Name=comp49108_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=481;mismatches=0;indels=4;unknowns=0;Target=comp49108_c0_seq1 483 1 .;CDS_Target=comp49108_c0_seq1 243 103 .;locus=RLOC_00016461
Chr2	stalkie_big_nohaplotig	exon	36992164	36992646	99	-	.	Parent=comp49108_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	36992404	36992544	.	-	0	Parent=comp49108_c0_seq1.mrna1
Chr2	gffcl	locus	36994477	36995703	.	+	.	ID=RLOC_00016462;geneIDs=FBgn0002716.1.path1;transcripts=FBgn0002716.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	36994477	36995703	.	+	.	ID=FBgn0002716.1.mrna1;geneID=FBgn0002716.1.path1;Name=FBgn0002716.1;Dir=sensecoverage=100.0;identity=99.8;matches=1138;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016462
Chr2	stalkie_big_nohaplotig	exon	36994477	36994978	99	+	.	Parent=FBgn0002716.1.mrna1;Target=FBgn0002716.1 1 502 +
Chr2	stalkie_big_nohaplotig	exon	36995066	36995703	100	+	.	Parent=FBgn0002716.1.mrna1;Target=FBgn0002716.1 503 1140 +
Chr2	stalkie_big_nohaplotig	CDS	36994477	36994978	.	+	0	Parent=FBgn0002716.1.mrna1;Target=FBgn0002716.1 1 502 +
Chr2	stalkie_big_nohaplotig	CDS	36995066	36995703	.	+	2	Parent=FBgn0002716.1.mrna1;Target=FBgn0002716.1 503 1140 +
Chr2	gffcl	locus	37002911	37040990	.	+	.	ID=RLOC_00016463;geneIDs=FBgn0260934.1.path1,comp135627_c0_seq1.path1,comp160704_c1_seq1.path1;transcripts=comp160704_c1_seq1.mrna1,FBgn0260934.1.mrna1,comp135627_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37002911	37040990	.	+	.	ID=comp160704_c1_seq1.mrna1;geneID=comp160704_c1_seq1.path1;Name=comp160704_c1_seq1;Dir=antisensecoverage=99.0;identity=99.9;matches=5084;mismatches=5;indels=1;unknowns=0;locus=RLOC_00016463
Chr2	stalkie_big_nohaplotig	exon	37002911	37003346	99	+	.	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 4695 5130 -
Chr2	stalkie_big_nohaplotig	exon	37003827	37004828	100	+	.	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 3693 4694 -
Chr2	stalkie_big_nohaplotig	exon	37018279	37019457	100	+	.	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 2514 3692 -
Chr2	stalkie_big_nohaplotig	exon	37021438	37021653	100	+	.	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 2298 2513 -
Chr2	stalkie_big_nohaplotig	exon	37021719	37021939	100	+	.	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 2077 2297 -
Chr2	stalkie_big_nohaplotig	exon	37022027	37022308	100	+	.	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 1795 2076 -
Chr2	stalkie_big_nohaplotig	exon	37022389	37022582	100	+	.	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 1601 1794 -
Chr2	stalkie_big_nohaplotig	exon	37023798	37023910	100	+	.	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 1488 1600 -
Chr2	stalkie_big_nohaplotig	exon	37023989	37024172	100	+	.	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 1304 1487 -
Chr2	stalkie_big_nohaplotig	exon	37024609	37024708	100	+	.	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 1204 1303 -
Chr2	stalkie_big_nohaplotig	exon	37024780	37024904	100	+	.	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 1079 1203 -
Chr2	stalkie_big_nohaplotig	exon	37024965	37025124	100	+	.	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 919 1078 -
Chr2	stalkie_big_nohaplotig	exon	37025922	37026035	100	+	.	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 805 918 -
Chr2	stalkie_big_nohaplotig	exon	37028971	37029041	100	+	.	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 734 804 -
Chr2	stalkie_big_nohaplotig	exon	37032554	37032677	100	+	.	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 610 733 -
Chr2	stalkie_big_nohaplotig	exon	37039057	37039206	100	+	.	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 460 609 -
Chr2	stalkie_big_nohaplotig	exon	37039279	37039397	100	+	.	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 341 459 -
Chr2	stalkie_big_nohaplotig	exon	37040692	37040990	99	+	.	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 41 340 -
Chr2	stalkie_big_nohaplotig	CDS	37018354	37019457	.	+	0	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 2514 3617 .
Chr2	stalkie_big_nohaplotig	CDS	37021438	37021653	.	+	0	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 2298 2513 .
Chr2	stalkie_big_nohaplotig	CDS	37021719	37021939	.	+	0	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 2077 2297 .
Chr2	stalkie_big_nohaplotig	CDS	37022027	37022308	.	+	1	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 1795 2076 .
Chr2	stalkie_big_nohaplotig	CDS	37022389	37022582	.	+	1	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 1601 1794 .
Chr2	stalkie_big_nohaplotig	CDS	37023798	37023910	.	+	2	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 1488 1600 .
Chr2	stalkie_big_nohaplotig	CDS	37023989	37024172	.	+	0	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 1304 1487 .
Chr2	stalkie_big_nohaplotig	CDS	37024609	37024708	.	+	2	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 1204 1303 .
Chr2	stalkie_big_nohaplotig	CDS	37024780	37024904	.	+	1	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 1079 1203 .
Chr2	stalkie_big_nohaplotig	CDS	37024965	37025124	.	+	2	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 919 1078 .
Chr2	stalkie_big_nohaplotig	CDS	37025922	37026035	.	+	1	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 805 918 .
Chr2	stalkie_big_nohaplotig	CDS	37028971	37029041	.	+	1	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 734 804 .
Chr2	stalkie_big_nohaplotig	CDS	37032554	37032677	.	+	2	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 610 733 .
Chr2	stalkie_big_nohaplotig	CDS	37039057	37039206	.	+	1	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 460 609 .
Chr2	stalkie_big_nohaplotig	CDS	37039279	37039397	.	+	1	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 341 459 .
Chr2	stalkie_big_nohaplotig	CDS	37040692	37040750	.	+	2	Parent=comp160704_c1_seq1.mrna1;Target=comp160704_c1_seq1 282 340 .
Chr2	stalkie_big_nohaplotig	mRNA	37018324	37040747	.	+	.	ID=FBgn0260934.1.mrna1;geneID=FBgn0260934.1.path1;Name=FBgn0260934.1;Dir=sensecoverage=100.0;identity=100.0;matches=3222;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016463
Chr2	stalkie_big_nohaplotig	exon	37018324	37019457	100	+	.	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 1 1134 +
Chr2	stalkie_big_nohaplotig	exon	37021438	37021653	100	+	.	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 1135 1350 +
Chr2	stalkie_big_nohaplotig	exon	37021719	37021939	100	+	.	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 1351 1571 +
Chr2	stalkie_big_nohaplotig	exon	37022027	37022308	100	+	.	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 1572 1853 +
Chr2	stalkie_big_nohaplotig	exon	37022389	37022582	100	+	.	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 1854 2047 +
Chr2	stalkie_big_nohaplotig	exon	37023798	37023910	100	+	.	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 2048 2160 +
Chr2	stalkie_big_nohaplotig	exon	37023989	37024172	100	+	.	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 2161 2344 +
Chr2	stalkie_big_nohaplotig	exon	37024609	37024708	100	+	.	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 2345 2444 +
Chr2	stalkie_big_nohaplotig	exon	37024780	37024904	100	+	.	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 2445 2569 +
Chr2	stalkie_big_nohaplotig	exon	37024965	37025124	100	+	.	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 2570 2729 +
Chr2	stalkie_big_nohaplotig	exon	37028998	37029041	100	+	.	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 2730 2773 +
Chr2	stalkie_big_nohaplotig	exon	37032554	37032677	100	+	.	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 2774 2897 +
Chr2	stalkie_big_nohaplotig	exon	37039057	37039206	100	+	.	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 2898 3047 +
Chr2	stalkie_big_nohaplotig	exon	37039279	37039397	100	+	.	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 3048 3166 +
Chr2	stalkie_big_nohaplotig	exon	37040692	37040747	100	+	.	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 3167 3222 +
Chr2	stalkie_big_nohaplotig	CDS	37018324	37019457	.	+	0	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 1 1134 +
Chr2	stalkie_big_nohaplotig	CDS	37021438	37021653	.	+	0	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 1135 1350 +
Chr2	stalkie_big_nohaplotig	CDS	37021719	37021939	.	+	0	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 1351 1571 +
Chr2	stalkie_big_nohaplotig	CDS	37022027	37022308	.	+	1	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 1572 1853 +
Chr2	stalkie_big_nohaplotig	CDS	37022389	37022582	.	+	1	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 1854 2047 +
Chr2	stalkie_big_nohaplotig	CDS	37023798	37023910	.	+	2	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 2048 2160 +
Chr2	stalkie_big_nohaplotig	CDS	37023989	37024172	.	+	0	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 2161 2344 +
Chr2	stalkie_big_nohaplotig	CDS	37024609	37024708	.	+	2	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 2345 2444 +
Chr2	stalkie_big_nohaplotig	CDS	37024780	37024904	.	+	1	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 2445 2569 +
Chr2	stalkie_big_nohaplotig	CDS	37024965	37025124	.	+	2	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 2570 2729 +
Chr2	stalkie_big_nohaplotig	CDS	37028998	37029041	.	+	1	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 2730 2773 +
Chr2	stalkie_big_nohaplotig	CDS	37032554	37032677	.	+	2	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 2774 2897 +
Chr2	stalkie_big_nohaplotig	CDS	37039057	37039206	.	+	1	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 2898 3047 +
Chr2	stalkie_big_nohaplotig	CDS	37039279	37039397	.	+	1	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 3048 3166 +
Chr2	stalkie_big_nohaplotig	CDS	37040692	37040747	.	+	2	Parent=FBgn0260934.1.mrna1;Target=FBgn0260934.1 3167 3222 +
Chr2	stalkie_big_nohaplotig	mRNA	37028630	37028992	.	+	.	ID=comp135627_c0_seq1.mrna1;geneID=comp135627_c0_seq1.path1;Name=comp135627_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=363;mismatches=0;indels=0;unknowns=0;Target=comp135627_c0_seq1 363 1 .;CDS_Target=comp135627_c0_seq1 87 1 .;locus=RLOC_00016463
Chr2	stalkie_big_nohaplotig	exon	37028630	37028992	100	+	.	Parent=comp135627_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37028630	37028716	.	+	0	Parent=comp135627_c0_seq1.mrna1
Chr2	gffcl	locus	37008618	37008994	.	-	.	ID=RLOC_00016464;geneIDs=comp146808_c0_seq1.path1;transcripts=comp146808_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37008618	37008994	.	-	.	ID=comp146808_c0_seq1.mrna1;geneID=comp146808_c0_seq1.path1;Name=comp146808_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.5;matches=375;mismatches=2;indels=0;unknowns=0;Target=comp146808_c0_seq1 378 2 .;CDS_Target=comp146808_c0_seq1 50 3 .;locus=RLOC_00016464
Chr2	stalkie_big_nohaplotig	exon	37008618	37008994	99	-	.	Parent=comp146808_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37008946	37008993	.	-	0	Parent=comp146808_c0_seq1.mrna1
Chr2	gffcl	locus	37037078	37037412	.	+	.	ID=RLOC_00016465;geneIDs=comp151584_c1_seq1.path1;transcripts=comp151584_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37037078	37037412	.	+	.	ID=comp151584_c1_seq1.mrna1;geneID=comp151584_c1_seq1.path1;Name=comp151584_c1_seq1;Dir=indeterminatecoverage=58.5;identity=99.4;matches=335;mismatches=0;indels=2;unknowns=0;Target=comp151584_c1_seq1 337 1 .;CDS_Target=comp151584_c1_seq1 316 2 .;locus=RLOC_00016465
Chr2	stalkie_big_nohaplotig	exon	37037078	37037412	99	+	.	Parent=comp151584_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37037079	37037391	.	+	0	Parent=comp151584_c1_seq1.mrna1
Chr2	gffcl	locus	37038094	37047012	.	-	.	ID=RLOC_00016466;geneIDs=comp147923_c0_seq1.path1;transcripts=comp147923_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37038094	37047012	.	-	.	ID=comp147923_c0_seq1.mrna1;geneID=comp147923_c0_seq1.path1;Name=comp147923_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=661;mismatches=5;indels=4;unknowns=0;Target=comp147923_c0_seq1 297 172 .;locus=RLOC_00016466
Chr2	stalkie_big_nohaplotig	exon	37038094	37038717	100	-	.	Parent=comp147923_c0_seq1.mrna1;Target=comp147923_c0_seq1 670 47 .
Chr2	stalkie_big_nohaplotig	exon	37040614	37040619	100	-	.	Parent=comp147923_c0_seq1.mrna1;Target=comp147923_c0_seq1 46 41 .
Chr2	stalkie_big_nohaplotig	exon	37040966	37040980	73	-	.	Parent=comp147923_c0_seq1.mrna1;Target=comp147923_c0_seq1 40 22 .
Chr2	stalkie_big_nohaplotig	exon	37046992	37047012	80	-	.	Parent=comp147923_c0_seq1.mrna1;Target=comp147923_c0_seq1 21 1 .
Chr2	stalkie_big_nohaplotig	CDS	37038467	37038592	.	-	0	Parent=comp147923_c0_seq1.mrna1
Chr2	gffcl	locus	37041956	37042843	.	+	.	ID=RLOC_00016467;geneIDs=comp54535_c0_seq1.path1,comp65065_c0_seq1.path1;transcripts=comp54535_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37041956	37042531	.	+	.	ID=comp54535_c0_seq1.mrna1;geneID=comp54535_c0_seq1.path1;Name=comp54535_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=571;mismatches=5;indels=0;unknowns=0;Target=comp54535_c0_seq1 576 1 .;CDS_Target=comp54535_c0_seq1 159 88 .;locus=RLOC_00016467
Chr2	stalkie_big_nohaplotig	exon	37041956	37042531	99	+	.	Parent=comp54535_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37042043	37042114	.	+	0	Parent=comp54535_c0_seq1.mrna1
Chr2	gffcl	locus	37049949	37060576	.	+	.	ID=RLOC_00016468;geneIDs=FBgn0011236.1.path1;transcripts=FBgn0011236.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37049949	37060576	.	+	.	ID=FBgn0011236.1.mrna1;geneID=FBgn0011236.1.path1;Name=FBgn0011236.1;Dir=sensecoverage=100.0;identity=99.8;matches=1676;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016468
Chr2	stalkie_big_nohaplotig	exon	37049949	37049993	100	+	.	Parent=FBgn0011236.1.mrna1;Target=FBgn0011236.1 1 45 +
Chr2	stalkie_big_nohaplotig	exon	37057022	37057191	100	+	.	Parent=FBgn0011236.1.mrna1;Target=FBgn0011236.1 46 215 +
Chr2	stalkie_big_nohaplotig	exon	37059112	37060576	99	+	.	Parent=FBgn0011236.1.mrna1;Target=FBgn0011236.1 216 1680 +
Chr2	stalkie_big_nohaplotig	CDS	37049949	37049993	.	+	0	Parent=FBgn0011236.1.mrna1;Target=FBgn0011236.1 1 45 +
Chr2	stalkie_big_nohaplotig	CDS	37057022	37057191	.	+	0	Parent=FBgn0011236.1.mrna1;Target=FBgn0011236.1 46 215 +
Chr2	stalkie_big_nohaplotig	CDS	37059112	37060576	.	+	1	Parent=FBgn0011236.1.mrna1;Target=FBgn0011236.1 216 1680 +
Chr2	gffcl	locus	37065943	37067808	.	-	.	ID=RLOC_00016469;geneIDs=FBgn0034970.1.path1;transcripts=FBgn0034970.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37065943	37067808	.	-	.	ID=FBgn0034970.1.mrna1;geneID=FBgn0034970.1.path1;Name=FBgn0034970.1;Dir=sensecoverage=100.0;identity=99.9;matches=1456;mismatches=1;indels=1;unknowns=0;locus=RLOC_00016469
Chr2	stalkie_big_nohaplotig	exon	37065943	37066038	100	-	.	Parent=FBgn0034970.1.mrna1;Target=FBgn0034970.1 1363 1458 +
Chr2	stalkie_big_nohaplotig	exon	37066118	37066170	100	-	.	Parent=FBgn0034970.1.mrna1;Target=FBgn0034970.1 1310 1362 +
Chr2	stalkie_big_nohaplotig	exon	37066231	37066402	100	-	.	Parent=FBgn0034970.1.mrna1;Target=FBgn0034970.1 1138 1309 +
Chr2	stalkie_big_nohaplotig	exon	37066460	37066569	100	-	.	Parent=FBgn0034970.1.mrna1;Target=FBgn0034970.1 1028 1137 +
Chr2	stalkie_big_nohaplotig	exon	37066628	37066780	100	-	.	Parent=FBgn0034970.1.mrna1;Target=FBgn0034970.1 875 1027 +
Chr2	stalkie_big_nohaplotig	exon	37066840	37066922	98	-	.	Parent=FBgn0034970.1.mrna1;Target=FBgn0034970.1 792 874 +
Chr2	stalkie_big_nohaplotig	exon	37067019	37067808	99	-	.	Parent=FBgn0034970.1.mrna1;Target=FBgn0034970.1 1 791 +
Chr2	stalkie_big_nohaplotig	CDS	37065943	37066038	.	-	0	Parent=FBgn0034970.1.mrna1;Target=FBgn0034970.1 1363 1458 +
Chr2	stalkie_big_nohaplotig	CDS	37066118	37066170	.	-	2	Parent=FBgn0034970.1.mrna1;Target=FBgn0034970.1 1310 1362 +
Chr2	stalkie_big_nohaplotig	CDS	37066231	37066402	.	-	0	Parent=FBgn0034970.1.mrna1;Target=FBgn0034970.1 1138 1309 +
Chr2	stalkie_big_nohaplotig	CDS	37066460	37066569	.	-	2	Parent=FBgn0034970.1.mrna1;Target=FBgn0034970.1 1028 1137 +
Chr2	stalkie_big_nohaplotig	CDS	37066628	37066780	.	-	2	Parent=FBgn0034970.1.mrna1;Target=FBgn0034970.1 875 1027 +
Chr2	stalkie_big_nohaplotig	CDS	37066840	37066922	.	-	1	Parent=FBgn0034970.1.mrna1;Target=FBgn0034970.1 792 874 +
Chr2	stalkie_big_nohaplotig	CDS	37067019	37067761	.	-	0	Parent=FBgn0034970.1.mrna1;Target=FBgn0034970.1 49 791 +
Chr2	gffcl	locus	37069957	37070470	.	-	.	ID=RLOC_00016470;geneIDs=FBgn0028683.1.path1;transcripts=FBgn0028683.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37069957	37070470	.	-	.	ID=FBgn0028683.1.mrna1;geneID=FBgn0028683.1.path1;Name=FBgn0028683.1;Dir=sensecoverage=100.0;identity=100.0;matches=378;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016470
Chr2	stalkie_big_nohaplotig	exon	37069957	37070084	100	-	.	Parent=FBgn0028683.1.mrna1;Target=FBgn0028683.1 251 378 +
Chr2	stalkie_big_nohaplotig	exon	37070144	37070306	100	-	.	Parent=FBgn0028683.1.mrna1;Target=FBgn0028683.1 88 250 +
Chr2	stalkie_big_nohaplotig	exon	37070384	37070470	100	-	.	Parent=FBgn0028683.1.mrna1;Target=FBgn0028683.1 1 87 +
Chr2	stalkie_big_nohaplotig	CDS	37069957	37070084	.	-	2	Parent=FBgn0028683.1.mrna1;Target=FBgn0028683.1 251 378 +
Chr2	stalkie_big_nohaplotig	CDS	37070144	37070306	.	-	0	Parent=FBgn0028683.1.mrna1;Target=FBgn0028683.1 88 250 +
Chr2	stalkie_big_nohaplotig	CDS	37070384	37070470	.	-	0	Parent=FBgn0028683.1.mrna1;Target=FBgn0028683.1 1 87 +
Chr2	gffcl	locus	37071689	37071977	.	+	.	ID=RLOC_00016471;geneIDs=comp67397_c1_seq1.path1;transcripts=comp67397_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37071689	37071977	.	+	.	ID=comp67397_c1_seq1.mrna1;geneID=comp67397_c1_seq1.path1;Name=comp67397_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=289;mismatches=0;indels=0;unknowns=0;Target=comp67397_c1_seq1 289 1 .;CDS_Target=comp67397_c1_seq1 61 2 .;locus=RLOC_00016471
Chr2	stalkie_big_nohaplotig	exon	37071689	37071977	100	+	.	Parent=comp67397_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37071690	37071749	.	+	0	Parent=comp67397_c1_seq1.mrna1
Chr2	gffcl	locus	37073522	37332768	.	-	.	ID=RLOC_00016472;geneIDs=comp157730_c1_seq1.path1;transcripts=comp157730_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37073522	37332768	.	-	.	ID=comp157730_c1_seq1.mrna1;geneID=comp157730_c1_seq1.path1;Name=comp157730_c1_seq1;Dir=indeterminatecoverage=95.4;identity=94.5;matches=2524;mismatches=62;indels=84;unknowns=0;locus=RLOC_00016472
Chr2	stalkie_big_nohaplotig	exon	37073522	37073832	97	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 2915 2605 .
Chr2	stalkie_big_nohaplotig	exon	37073883	37074276	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 2604 2211 .
Chr2	stalkie_big_nohaplotig	exon	37074329	37074433	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 2210 2106 .
Chr2	stalkie_big_nohaplotig	exon	37074485	37075018	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 2105 1572 .
Chr2	stalkie_big_nohaplotig	exon	37075441	37075572	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 1571 1440 .
Chr2	stalkie_big_nohaplotig	exon	37075675	37075805	96	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 1439 1309 .
Chr2	stalkie_big_nohaplotig	exon	37075861	37076142	98	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 1308 1027 .
Chr2	stalkie_big_nohaplotig	exon	37084001	37084003	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 1026 1024 .
Chr2	stalkie_big_nohaplotig	exon	37089014	37089016	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 1023 1021 .
Chr2	stalkie_big_nohaplotig	exon	37155343	37155352	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 967 958 .
Chr2	stalkie_big_nohaplotig	exon	37155813	37155816	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 957 954 .
Chr2	stalkie_big_nohaplotig	exon	37178402	37178417	47	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 945 929 .
Chr2	stalkie_big_nohaplotig	exon	37189395	37189408	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 843 830 .
Chr2	stalkie_big_nohaplotig	exon	37202516	37202519	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 829 826 .
Chr2	stalkie_big_nohaplotig	exon	37207316	37207318	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 825 823 .
Chr2	stalkie_big_nohaplotig	exon	37214063	37214072	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 815 806 .
Chr2	stalkie_big_nohaplotig	exon	37214084	37214092	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 785 777 .
Chr2	stalkie_big_nohaplotig	exon	37217796	37217801	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 776 771 .
Chr2	stalkie_big_nohaplotig	exon	37225217	37225223	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 770 764 .
Chr2	stalkie_big_nohaplotig	exon	37226024	37226027	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 763 760 .
Chr2	stalkie_big_nohaplotig	exon	37231301	37231303	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 759 757 .
Chr2	stalkie_big_nohaplotig	exon	37235720	37235728	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 755 747 .
Chr2	stalkie_big_nohaplotig	exon	37238484	37238488	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 746 742 .
Chr2	stalkie_big_nohaplotig	exon	37238858	37238866	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 741 733 .
Chr2	stalkie_big_nohaplotig	exon	37242745	37242750	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 732 727 .
Chr2	stalkie_big_nohaplotig	exon	37246564	37246568	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 726 722 .
Chr2	stalkie_big_nohaplotig	exon	37249459	37249460	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 721 720 .
Chr2	stalkie_big_nohaplotig	exon	37249479	37249489	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 704 694 .
Chr2	stalkie_big_nohaplotig	exon	37255973	37255979	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 693 687 .
Chr2	stalkie_big_nohaplotig	exon	37261167	37261170	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 686 683 .
Chr2	stalkie_big_nohaplotig	exon	37265253	37265257	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 682 678 .
Chr2	stalkie_big_nohaplotig	exon	37268766	37268768	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 677 675 .
Chr2	stalkie_big_nohaplotig	exon	37270274	37270276	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 674 672 .
Chr2	stalkie_big_nohaplotig	exon	37271013	37271016	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 671 668 .
Chr2	stalkie_big_nohaplotig	exon	37303668	37303671	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 667 664 .
Chr2	stalkie_big_nohaplotig	exon	37324752	37324754	100	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 663 661 .
Chr2	stalkie_big_nohaplotig	exon	37332171	37332768	80	-	.	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 660 136 .
Chr2	stalkie_big_nohaplotig	CDS	37075011	37075018	.	-	2	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 1579 1572 .
Chr2	stalkie_big_nohaplotig	CDS	37075441	37075572	.	-	2	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 1571 1440 .
Chr2	stalkie_big_nohaplotig	CDS	37075675	37075805	.	-	1	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 1439 1309 .
Chr2	stalkie_big_nohaplotig	CDS	37075861	37076075	.	-	0	Parent=comp157730_c1_seq1.mrna1;Target=comp157730_c1_seq1 1308 1094 .
Chr2	gffcl	locus	37073584	37075559	.	+	.	ID=RLOC_00016473;geneIDs=Dv_FBgn0201266.2.path2;transcripts=Dv_FBgn0201266.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	37073584	37075559	.	+	.	ID=Dv_FBgn0201266.2.mrna2;geneID=Dv_FBgn0201266.2.path2;Name=Dv_FBgn0201266.2;Dir=sensecoverage=100.0;identity=100.0;matches=1401;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016473
Chr2	stalkie_big_nohaplotig	exon	37073584	37073832	100	+	.	Parent=Dv_FBgn0201266.2.mrna2;Target=Dv_FBgn0201266.2 1 249 +
Chr2	stalkie_big_nohaplotig	exon	37073883	37074276	100	+	.	Parent=Dv_FBgn0201266.2.mrna2;Target=Dv_FBgn0201266.2 250 643 +
Chr2	stalkie_big_nohaplotig	exon	37074329	37074431	100	+	.	Parent=Dv_FBgn0201266.2.mrna2;Target=Dv_FBgn0201266.2 644 746 +
Chr2	stalkie_big_nohaplotig	exon	37074483	37075018	100	+	.	Parent=Dv_FBgn0201266.2.mrna2;Target=Dv_FBgn0201266.2 747 1282 +
Chr2	stalkie_big_nohaplotig	exon	37075441	37075559	100	+	.	Parent=Dv_FBgn0201266.2.mrna2;Target=Dv_FBgn0201266.2 1283 1401 +
Chr2	stalkie_big_nohaplotig	CDS	37073584	37073832	.	+	0	Parent=Dv_FBgn0201266.2.mrna2;Target=Dv_FBgn0201266.2 1 249 +
Chr2	stalkie_big_nohaplotig	CDS	37073883	37074276	.	+	0	Parent=Dv_FBgn0201266.2.mrna2;Target=Dv_FBgn0201266.2 250 643 +
Chr2	stalkie_big_nohaplotig	CDS	37074329	37074431	.	+	2	Parent=Dv_FBgn0201266.2.mrna2;Target=Dv_FBgn0201266.2 644 746 +
Chr2	stalkie_big_nohaplotig	CDS	37074483	37075018	.	+	1	Parent=Dv_FBgn0201266.2.mrna2;Target=Dv_FBgn0201266.2 747 1282 +
Chr2	stalkie_big_nohaplotig	CDS	37075441	37075559	.	+	2	Parent=Dv_FBgn0201266.2.mrna2;Target=Dv_FBgn0201266.2 1283 1401 +
Chr2	gffcl	locus	37077607	37088625	.	.	.	ID=RLOC_00016474;geneIDs=FBgn0020440.1.path1,comp145850_c0_seq1.path1;transcripts=FBgn0020440.1.mrna1,comp145850_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37077607	37088625	.	+	.	ID=FBgn0020440.1.mrna1;geneID=FBgn0020440.1.path1;Name=FBgn0020440.1;Dir=sensecoverage=100.0;identity=99.8;matches=4672;mismatches=8;indels=0;unknowns=0;locus=RLOC_00016474
Chr2	stalkie_big_nohaplotig	exon	37077607	37077634	100	+	.	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 1 28 +
Chr2	stalkie_big_nohaplotig	exon	37077708	37077779	100	+	.	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 29 100 +
Chr2	stalkie_big_nohaplotig	exon	37077902	37078320	98	+	.	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 101 519 +
Chr2	stalkie_big_nohaplotig	exon	37078388	37078659	100	+	.	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 520 791 +
Chr2	stalkie_big_nohaplotig	exon	37079277	37079386	100	+	.	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 792 901 +
Chr2	stalkie_big_nohaplotig	exon	37079449	37079678	99	+	.	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 902 1131 +
Chr2	stalkie_big_nohaplotig	exon	37079742	37080024	100	+	.	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 1132 1414 +
Chr2	stalkie_big_nohaplotig	exon	37080183	37080422	100	+	.	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 1415 1654 +
Chr2	stalkie_big_nohaplotig	exon	37080487	37080619	100	+	.	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 1655 1787 +
Chr2	stalkie_big_nohaplotig	exon	37081668	37081800	100	+	.	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 1788 1920 +
Chr2	stalkie_big_nohaplotig	exon	37081948	37082089	99	+	.	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 1921 2062 +
Chr2	stalkie_big_nohaplotig	exon	37082148	37082352	100	+	.	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 2063 2267 +
Chr2	stalkie_big_nohaplotig	exon	37084711	37084847	100	+	.	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 2268 2404 +
Chr2	stalkie_big_nohaplotig	exon	37084907	37086129	100	+	.	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 2405 3627 +
Chr2	stalkie_big_nohaplotig	exon	37086644	37086742	100	+	.	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 3628 3726 +
Chr2	stalkie_big_nohaplotig	exon	37087483	37087585	100	+	.	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 3727 3829 +
Chr2	stalkie_big_nohaplotig	exon	37087653	37087899	100	+	.	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 3830 4076 +
Chr2	stalkie_big_nohaplotig	exon	37087958	37088068	100	+	.	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 4077 4187 +
Chr2	stalkie_big_nohaplotig	exon	37088133	37088625	100	+	.	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 4188 4680 +
Chr2	stalkie_big_nohaplotig	CDS	37077607	37077634	.	+	0	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 1 28 +
Chr2	stalkie_big_nohaplotig	CDS	37077708	37077779	.	+	2	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 29 100 +
Chr2	stalkie_big_nohaplotig	CDS	37077902	37078320	.	+	2	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 101 519 +
Chr2	stalkie_big_nohaplotig	CDS	37078388	37078659	.	+	0	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 520 791 +
Chr2	stalkie_big_nohaplotig	CDS	37079277	37079386	.	+	1	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 792 901 +
Chr2	stalkie_big_nohaplotig	CDS	37079449	37079678	.	+	2	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 902 1131 +
Chr2	stalkie_big_nohaplotig	CDS	37079742	37080024	.	+	0	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 1132 1414 +
Chr2	stalkie_big_nohaplotig	CDS	37080183	37080422	.	+	2	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 1415 1654 +
Chr2	stalkie_big_nohaplotig	CDS	37080487	37080619	.	+	2	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 1655 1787 +
Chr2	stalkie_big_nohaplotig	CDS	37081668	37081800	.	+	1	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 1788 1920 +
Chr2	stalkie_big_nohaplotig	CDS	37081948	37082089	.	+	0	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 1921 2062 +
Chr2	stalkie_big_nohaplotig	CDS	37082148	37082352	.	+	2	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 2063 2267 +
Chr2	stalkie_big_nohaplotig	CDS	37084711	37084847	.	+	1	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 2268 2404 +
Chr2	stalkie_big_nohaplotig	CDS	37084907	37086129	.	+	2	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 2405 3627 +
Chr2	stalkie_big_nohaplotig	CDS	37086644	37086742	.	+	0	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 3628 3726 +
Chr2	stalkie_big_nohaplotig	CDS	37087483	37087585	.	+	0	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 3727 3829 +
Chr2	stalkie_big_nohaplotig	CDS	37087653	37087899	.	+	2	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 3830 4076 +
Chr2	stalkie_big_nohaplotig	CDS	37087958	37088068	.	+	1	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 4077 4187 +
Chr2	stalkie_big_nohaplotig	CDS	37088133	37088625	.	+	1	Parent=FBgn0020440.1.mrna1;Target=FBgn0020440.1 4188 4680 +
Chr2	stalkie_big_nohaplotig	mRNA	37086720	37087215	.	-	.	ID=comp145850_c0_seq1.mrna1;geneID=comp145850_c0_seq1.path1;Name=comp145850_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=496;mismatches=0;indels=0;unknowns=0;Target=comp145850_c0_seq1 496 1 .;CDS_Target=comp145850_c0_seq1 94 2 .;locus=RLOC_00016474
Chr2	stalkie_big_nohaplotig	exon	37086720	37087215	100	-	.	Parent=comp145850_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37087122	37087214	.	-	0	Parent=comp145850_c0_seq1.mrna1
Chr2	gffcl	locus	37080660	37081655	.	-	.	ID=RLOC_00016475;geneIDs=FBgn0034505.1.path1;transcripts=FBgn0034505.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37080660	37081655	.	-	.	ID=FBgn0034505.1.mrna1;geneID=FBgn0034505.1.path1;Name=FBgn0034505.1;Dir=sensecoverage=100.0;identity=100.0;matches=441;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016475
Chr2	stalkie_big_nohaplotig	exon	37080660	37080742	100	-	.	Parent=FBgn0034505.1.mrna1;Target=FBgn0034505.1 359 441 +
Chr2	stalkie_big_nohaplotig	exon	37081298	37081655	100	-	.	Parent=FBgn0034505.1.mrna1;Target=FBgn0034505.1 1 358 +
Chr2	stalkie_big_nohaplotig	CDS	37080660	37080742	.	-	2	Parent=FBgn0034505.1.mrna1;Target=FBgn0034505.1 359 441 +
Chr2	stalkie_big_nohaplotig	CDS	37081298	37081655	.	-	0	Parent=FBgn0034505.1.mrna1;Target=FBgn0034505.1 1 358 +
Chr2	gffcl	locus	37090971	37091791	.	+	.	ID=RLOC_00016476;geneIDs=FBgn0034446.1.path1;transcripts=FBgn0034446.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37090971	37091791	.	+	.	ID=FBgn0034446.1.mrna1;geneID=FBgn0034446.1.path1;Name=FBgn0034446.1;Dir=sensecoverage=100.0;identity=99.8;matches=581;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016476
Chr2	stalkie_big_nohaplotig	exon	37090971	37091154	100	+	.	Parent=FBgn0034446.1.mrna1;Target=FBgn0034446.1 1 184 +
Chr2	stalkie_big_nohaplotig	exon	37091264	37091392	100	+	.	Parent=FBgn0034446.1.mrna1;Target=FBgn0034446.1 185 313 +
Chr2	stalkie_big_nohaplotig	exon	37091464	37091592	99	+	.	Parent=FBgn0034446.1.mrna1;Target=FBgn0034446.1 314 442 +
Chr2	stalkie_big_nohaplotig	exon	37091652	37091791	100	+	.	Parent=FBgn0034446.1.mrna1;Target=FBgn0034446.1 443 582 +
Chr2	stalkie_big_nohaplotig	CDS	37090971	37091154	.	+	0	Parent=FBgn0034446.1.mrna1;Target=FBgn0034446.1 1 184 +
Chr2	stalkie_big_nohaplotig	CDS	37091264	37091392	.	+	2	Parent=FBgn0034446.1.mrna1;Target=FBgn0034446.1 185 313 +
Chr2	stalkie_big_nohaplotig	CDS	37091464	37091592	.	+	2	Parent=FBgn0034446.1.mrna1;Target=FBgn0034446.1 314 442 +
Chr2	stalkie_big_nohaplotig	CDS	37091652	37091791	.	+	2	Parent=FBgn0034446.1.mrna1;Target=FBgn0034446.1 443 582 +
Chr2	gffcl	locus	37093314	37098210	.	-	.	ID=RLOC_00016477;geneIDs=AAEL000967.1.path1,comp154806_c2_seq1.path1;transcripts=comp154806_c2_seq1.mrna1,AAEL000967.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37093314	37098210	.	-	.	ID=comp154806_c2_seq1.mrna1;geneID=comp154806_c2_seq1.path1;Name=comp154806_c2_seq1;Dir=antisensecoverage=97.5;identity=99.9;matches=2684;mismatches=2;indels=0;unknowns=0;Target=comp154806_c2_seq1 207 1994 .;locus=RLOC_00016477
Chr2	stalkie_big_nohaplotig	exon	37093314	37095343	99	-	.	Parent=comp154806_c2_seq1.mrna1;Target=comp154806_c2_seq1 67 2096 -
Chr2	stalkie_big_nohaplotig	exon	37095416	37095462	100	-	.	Parent=comp154806_c2_seq1.mrna1;Target=comp154806_c2_seq1 2097 2143 -
Chr2	stalkie_big_nohaplotig	exon	37097415	37097647	100	-	.	Parent=comp154806_c2_seq1.mrna1;Target=comp154806_c2_seq1 2144 2376 -
Chr2	stalkie_big_nohaplotig	exon	37097835	37098210	100	-	.	Parent=comp154806_c2_seq1.mrna1;Target=comp154806_c2_seq1 2377 2752 -
Chr2	stalkie_big_nohaplotig	CDS	37093454	37095241	.	-	0	Parent=comp154806_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37093457	37098006	.	-	.	ID=AAEL000967.1.mrna1;geneID=AAEL000967.1.path1;Name=AAEL000967.1;Dir=sensecoverage=100.0;identity=99.9;matches=2290;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016477
Chr2	stalkie_big_nohaplotig	exon	37093457	37095343	99	-	.	Parent=AAEL000967.1.mrna1;Target=AAEL000967.1 406 2292 +
Chr2	stalkie_big_nohaplotig	exon	37097415	37097647	100	-	.	Parent=AAEL000967.1.mrna1;Target=AAEL000967.1 173 405 +
Chr2	stalkie_big_nohaplotig	exon	37097835	37098006	100	-	.	Parent=AAEL000967.1.mrna1;Target=AAEL000967.1 1 172 +
Chr2	stalkie_big_nohaplotig	CDS	37093457	37095343	.	-	0	Parent=AAEL000967.1.mrna1;Target=AAEL000967.1 406 2292 +
Chr2	stalkie_big_nohaplotig	CDS	37097415	37097647	.	-	2	Parent=AAEL000967.1.mrna1;Target=AAEL000967.1 173 405 +
Chr2	stalkie_big_nohaplotig	CDS	37097835	37098006	.	-	0	Parent=AAEL000967.1.mrna1;Target=AAEL000967.1 1 172 +
Chr2	gffcl	locus	37102599	37108949	.	+	.	ID=RLOC_00016478;geneIDs=FBgn0260799.1.path1;transcripts=FBgn0260799.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37102599	37108949	.	+	.	ID=FBgn0260799.1.mrna1;geneID=FBgn0260799.1.path1;Name=FBgn0260799.1;Dir=sensecoverage=100.0;identity=100.0;matches=2736;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016478
Chr2	stalkie_big_nohaplotig	exon	37102599	37102612	100	+	.	Parent=FBgn0260799.1.mrna1;Target=FBgn0260799.1 1 14 +
Chr2	stalkie_big_nohaplotig	exon	37103738	37103992	100	+	.	Parent=FBgn0260799.1.mrna1;Target=FBgn0260799.1 15 269 +
Chr2	stalkie_big_nohaplotig	exon	37104053	37104940	100	+	.	Parent=FBgn0260799.1.mrna1;Target=FBgn0260799.1 270 1157 +
Chr2	stalkie_big_nohaplotig	exon	37105666	37106225	100	+	.	Parent=FBgn0260799.1.mrna1;Target=FBgn0260799.1 1158 1717 +
Chr2	stalkie_big_nohaplotig	exon	37107858	37108762	100	+	.	Parent=FBgn0260799.1.mrna1;Target=FBgn0260799.1 1718 2622 +
Chr2	stalkie_big_nohaplotig	exon	37108836	37108949	100	+	.	Parent=FBgn0260799.1.mrna1;Target=FBgn0260799.1 2623 2736 +
Chr2	stalkie_big_nohaplotig	CDS	37102599	37102612	.	+	0	Parent=FBgn0260799.1.mrna1;Target=FBgn0260799.1 1 14 +
Chr2	stalkie_big_nohaplotig	CDS	37103738	37103992	.	+	1	Parent=FBgn0260799.1.mrna1;Target=FBgn0260799.1 15 269 +
Chr2	stalkie_big_nohaplotig	CDS	37104053	37104940	.	+	1	Parent=FBgn0260799.1.mrna1;Target=FBgn0260799.1 270 1157 +
Chr2	stalkie_big_nohaplotig	CDS	37105666	37106225	.	+	1	Parent=FBgn0260799.1.mrna1;Target=FBgn0260799.1 1158 1717 +
Chr2	stalkie_big_nohaplotig	CDS	37107858	37108762	.	+	2	Parent=FBgn0260799.1.mrna1;Target=FBgn0260799.1 1718 2622 +
Chr2	stalkie_big_nohaplotig	CDS	37108836	37108949	.	+	0	Parent=FBgn0260799.1.mrna1;Target=FBgn0260799.1 2623 2736 +
Chr2	gffcl	locus	37110072	37110439	.	-	.	ID=RLOC_00016479;geneIDs=comp140677_c0_seq1.path1;transcripts=comp140677_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37110072	37110439	.	-	.	ID=comp140677_c0_seq1.mrna1;geneID=comp140677_c0_seq1.path1;Name=comp140677_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=368;mismatches=0;indels=0;unknowns=0;Target=comp140677_c0_seq1 368 1 .;CDS_Target=comp140677_c0_seq1 111 1 .;locus=RLOC_00016479
Chr2	stalkie_big_nohaplotig	exon	37110072	37110439	100	-	.	Parent=comp140677_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37110329	37110439	.	-	0	Parent=comp140677_c0_seq1.mrna1
Chr2	gffcl	locus	37114754	37119996	.	-	.	ID=RLOC_00016480;geneIDs=FBgn0004581.1.path1;transcripts=FBgn0004581.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37114754	37119996	.	-	.	ID=FBgn0004581.1.mrna1;geneID=FBgn0004581.1.path1;Name=FBgn0004581.1;Dir=sensecoverage=100.0;identity=99.9;matches=3096;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016480
Chr2	stalkie_big_nohaplotig	exon	37114754	37115046	100	-	.	Parent=FBgn0004581.1.mrna1;Target=FBgn0004581.1 2807 3099 +
Chr2	stalkie_big_nohaplotig	exon	37116216	37117163	99	-	.	Parent=FBgn0004581.1.mrna1;Target=FBgn0004581.1 1859 2806 +
Chr2	stalkie_big_nohaplotig	exon	37117233	37117583	99	-	.	Parent=FBgn0004581.1.mrna1;Target=FBgn0004581.1 1508 1858 +
Chr2	stalkie_big_nohaplotig	exon	37118490	37119996	100	-	.	Parent=FBgn0004581.1.mrna1;Target=FBgn0004581.1 1 1507 +
Chr2	stalkie_big_nohaplotig	CDS	37114754	37115046	.	-	2	Parent=FBgn0004581.1.mrna1;Target=FBgn0004581.1 2807 3099 +
Chr2	stalkie_big_nohaplotig	CDS	37116216	37117163	.	-	2	Parent=FBgn0004581.1.mrna1;Target=FBgn0004581.1 1859 2806 +
Chr2	stalkie_big_nohaplotig	CDS	37117233	37117583	.	-	2	Parent=FBgn0004581.1.mrna1;Target=FBgn0004581.1 1508 1858 +
Chr2	stalkie_big_nohaplotig	CDS	37118490	37119996	.	-	0	Parent=FBgn0004581.1.mrna1;Target=FBgn0004581.1 1 1507 +
Chr2	gffcl	locus	37122271	37123032	.	-	.	ID=RLOC_00016481;geneIDs=ORF3153.path1;transcripts=ORF3153.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37122271	37123032	.	-	.	ID=ORF3153.mrna1;geneID=ORF3153.path1;Name=ORF3153;Dir=indeterminatecoverage=100.0;identity=99.9;matches=761;mismatches=1;indels=0;unknowns=0;Target=ORF3153 762 1 .;locus=RLOC_00016481
Chr2	stalkie_big_nohaplotig	exon	37122271	37123032	99	-	.	Parent=ORF3153.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37122271	37123032	.	-	0	Parent=ORF3153.mrna1
Chr2	gffcl	locus	37128876	37148874	.	.	.	ID=RLOC_00016482;geneIDs=FBgn0261794.1.path1,comp145823_c0_seq1.path1,comp150518_c0_seq1.path1,comp160226_c3_seq1.path1;transcripts=comp160226_c3_seq1.mrna1,FBgn0261794.1.mrna1,comp150518_c0_seq1.mrna1,comp145823_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37128876	37148874	.	+	.	ID=comp160226_c3_seq1.mrna1;geneID=comp160226_c3_seq1.path1;Name=comp160226_c3_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=4273;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016482
Chr2	stalkie_big_nohaplotig	exon	37128876	37129566	99	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 1 691 +
Chr2	stalkie_big_nohaplotig	exon	37129641	37129824	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 692 875 +
Chr2	stalkie_big_nohaplotig	exon	37133700	37133807	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 876 983 +
Chr2	stalkie_big_nohaplotig	exon	37139616	37139807	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 984 1175 +
Chr2	stalkie_big_nohaplotig	exon	37139924	37140057	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 1176 1309 +
Chr2	stalkie_big_nohaplotig	exon	37140964	37141046	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 1310 1392 +
Chr2	stalkie_big_nohaplotig	exon	37141104	37141206	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 1393 1495 +
Chr2	stalkie_big_nohaplotig	exon	37141266	37141371	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 1496 1601 +
Chr2	stalkie_big_nohaplotig	exon	37141435	37141564	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 1602 1731 +
Chr2	stalkie_big_nohaplotig	exon	37141622	37141740	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 1732 1850 +
Chr2	stalkie_big_nohaplotig	exon	37141807	37141889	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 1851 1933 +
Chr2	stalkie_big_nohaplotig	exon	37143119	37143254	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 1934 2069 +
Chr2	stalkie_big_nohaplotig	exon	37143386	37143542	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 2070 2226 +
Chr2	stalkie_big_nohaplotig	exon	37143606	37143865	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 2227 2486 +
Chr2	stalkie_big_nohaplotig	exon	37143933	37144185	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 2487 2739 +
Chr2	stalkie_big_nohaplotig	exon	37144734	37145096	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 2740 3102 +
Chr2	stalkie_big_nohaplotig	exon	37145165	37145351	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 3103 3289 +
Chr2	stalkie_big_nohaplotig	exon	37145449	37145664	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 3290 3505 +
Chr2	stalkie_big_nohaplotig	exon	37145736	37145843	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 3506 3613 +
Chr2	stalkie_big_nohaplotig	exon	37145961	37146014	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 3614 3667 +
Chr2	stalkie_big_nohaplotig	exon	37147497	37147586	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 3668 3757 +
Chr2	stalkie_big_nohaplotig	exon	37147665	37147804	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 3758 3897 +
Chr2	stalkie_big_nohaplotig	exon	37148433	37148572	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 3898 4037 +
Chr2	stalkie_big_nohaplotig	exon	37148637	37148874	100	+	.	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 4038 4275 +
Chr2	stalkie_big_nohaplotig	CDS	37133705	37133807	.	+	0	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 881 983 +
Chr2	stalkie_big_nohaplotig	CDS	37139616	37139807	.	+	2	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 984 1175 +
Chr2	stalkie_big_nohaplotig	CDS	37139924	37140057	.	+	2	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 1176 1309 +
Chr2	stalkie_big_nohaplotig	CDS	37140964	37141046	.	+	0	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 1310 1392 +
Chr2	stalkie_big_nohaplotig	CDS	37141104	37141206	.	+	1	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 1393 1495 +
Chr2	stalkie_big_nohaplotig	CDS	37141266	37141371	.	+	0	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 1496 1601 +
Chr2	stalkie_big_nohaplotig	CDS	37141435	37141564	.	+	2	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 1602 1731 +
Chr2	stalkie_big_nohaplotig	CDS	37141622	37141740	.	+	1	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 1732 1850 +
Chr2	stalkie_big_nohaplotig	CDS	37141807	37141889	.	+	2	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 1851 1933 +
Chr2	stalkie_big_nohaplotig	CDS	37143119	37143254	.	+	0	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 1934 2069 +
Chr2	stalkie_big_nohaplotig	CDS	37143386	37143542	.	+	2	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 2070 2226 +
Chr2	stalkie_big_nohaplotig	CDS	37143606	37143865	.	+	1	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 2227 2486 +
Chr2	stalkie_big_nohaplotig	CDS	37143933	37144185	.	+	2	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 2487 2739 +
Chr2	stalkie_big_nohaplotig	CDS	37144734	37145096	.	+	1	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 2740 3102 +
Chr2	stalkie_big_nohaplotig	CDS	37145165	37145351	.	+	1	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 3103 3289 +
Chr2	stalkie_big_nohaplotig	CDS	37145449	37145664	.	+	0	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 3290 3505 +
Chr2	stalkie_big_nohaplotig	CDS	37145736	37145843	.	+	0	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 3506 3613 +
Chr2	stalkie_big_nohaplotig	CDS	37145961	37146014	.	+	0	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 3614 3667 +
Chr2	stalkie_big_nohaplotig	CDS	37147497	37147586	.	+	0	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 3668 3757 +
Chr2	stalkie_big_nohaplotig	CDS	37147665	37147804	.	+	0	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 3758 3897 +
Chr2	stalkie_big_nohaplotig	CDS	37148433	37148572	.	+	1	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 3898 4037 +
Chr2	stalkie_big_nohaplotig	CDS	37148637	37148728	.	+	2	Parent=comp160226_c3_seq1.mrna1;Target=comp160226_c3_seq1 4038 4129 +
Chr2	stalkie_big_nohaplotig	mRNA	37129701	37148725	.	+	.	ID=FBgn0261794.1.mrna1;geneID=FBgn0261794.1.path1;Name=FBgn0261794.1;Dir=sensecoverage=100.0;identity=100.0;matches=3321;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016482
Chr2	stalkie_big_nohaplotig	exon	37129701	37129824	100	+	.	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 1 124 +
Chr2	stalkie_big_nohaplotig	exon	37133700	37133807	100	+	.	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 125 232 +
Chr2	stalkie_big_nohaplotig	exon	37139616	37139807	100	+	.	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 233 424 +
Chr2	stalkie_big_nohaplotig	exon	37139924	37140057	100	+	.	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 425 558 +
Chr2	stalkie_big_nohaplotig	exon	37140964	37141046	100	+	.	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 559 641 +
Chr2	stalkie_big_nohaplotig	exon	37141104	37141206	100	+	.	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 642 744 +
Chr2	stalkie_big_nohaplotig	exon	37141266	37141371	100	+	.	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 745 850 +
Chr2	stalkie_big_nohaplotig	exon	37141435	37141564	100	+	.	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 851 980 +
Chr2	stalkie_big_nohaplotig	exon	37141622	37141740	100	+	.	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 981 1099 +
Chr2	stalkie_big_nohaplotig	exon	37141807	37141889	100	+	.	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 1100 1182 +
Chr2	stalkie_big_nohaplotig	exon	37143119	37143254	100	+	.	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 1183 1318 +
Chr2	stalkie_big_nohaplotig	exon	37143386	37143542	100	+	.	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 1319 1475 +
Chr2	stalkie_big_nohaplotig	exon	37143606	37143865	100	+	.	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 1476 1735 +
Chr2	stalkie_big_nohaplotig	exon	37143933	37144185	100	+	.	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 1736 1988 +
Chr2	stalkie_big_nohaplotig	exon	37144734	37145096	100	+	.	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 1989 2351 +
Chr2	stalkie_big_nohaplotig	exon	37145165	37145351	100	+	.	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 2352 2538 +
Chr2	stalkie_big_nohaplotig	exon	37145449	37145664	100	+	.	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 2539 2754 +
Chr2	stalkie_big_nohaplotig	exon	37145736	37145843	100	+	.	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 2755 2862 +
Chr2	stalkie_big_nohaplotig	exon	37147497	37147586	100	+	.	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 2863 2952 +
Chr2	stalkie_big_nohaplotig	exon	37147665	37147804	100	+	.	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 2953 3092 +
Chr2	stalkie_big_nohaplotig	exon	37148433	37148572	100	+	.	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 3093 3232 +
Chr2	stalkie_big_nohaplotig	exon	37148637	37148725	100	+	.	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 3233 3321 +
Chr2	stalkie_big_nohaplotig	CDS	37129701	37129824	.	+	0	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 1 124 +
Chr2	stalkie_big_nohaplotig	CDS	37133700	37133807	.	+	2	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 125 232 +
Chr2	stalkie_big_nohaplotig	CDS	37139616	37139807	.	+	2	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 233 424 +
Chr2	stalkie_big_nohaplotig	CDS	37139924	37140057	.	+	2	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 425 558 +
Chr2	stalkie_big_nohaplotig	CDS	37140964	37141046	.	+	0	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 559 641 +
Chr2	stalkie_big_nohaplotig	CDS	37141104	37141206	.	+	1	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 642 744 +
Chr2	stalkie_big_nohaplotig	CDS	37141266	37141371	.	+	0	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 745 850 +
Chr2	stalkie_big_nohaplotig	CDS	37141435	37141564	.	+	2	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 851 980 +
Chr2	stalkie_big_nohaplotig	CDS	37141622	37141740	.	+	1	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 981 1099 +
Chr2	stalkie_big_nohaplotig	CDS	37141807	37141889	.	+	2	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 1100 1182 +
Chr2	stalkie_big_nohaplotig	CDS	37143119	37143254	.	+	0	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 1183 1318 +
Chr2	stalkie_big_nohaplotig	CDS	37143386	37143542	.	+	2	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 1319 1475 +
Chr2	stalkie_big_nohaplotig	CDS	37143606	37143865	.	+	1	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 1476 1735 +
Chr2	stalkie_big_nohaplotig	CDS	37143933	37144185	.	+	2	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 1736 1988 +
Chr2	stalkie_big_nohaplotig	CDS	37144734	37145096	.	+	1	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 1989 2351 +
Chr2	stalkie_big_nohaplotig	CDS	37145165	37145351	.	+	1	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 2352 2538 +
Chr2	stalkie_big_nohaplotig	CDS	37145449	37145664	.	+	0	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 2539 2754 +
Chr2	stalkie_big_nohaplotig	CDS	37145736	37145843	.	+	0	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 2755 2862 +
Chr2	stalkie_big_nohaplotig	CDS	37147497	37147586	.	+	0	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 2863 2952 +
Chr2	stalkie_big_nohaplotig	CDS	37147665	37147804	.	+	0	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 2953 3092 +
Chr2	stalkie_big_nohaplotig	CDS	37148433	37148572	.	+	1	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 3093 3232 +
Chr2	stalkie_big_nohaplotig	CDS	37148637	37148725	.	+	2	Parent=FBgn0261794.1.mrna1;Target=FBgn0261794.1 3233 3321 +
Chr2	stalkie_big_nohaplotig	mRNA	37136551	37139637	.	+	.	ID=comp150518_c0_seq1.mrna1;geneID=comp150518_c0_seq1.path1;Name=comp150518_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=798;mismatches=0;indels=1;unknowns=0;locus=RLOC_00016482
Chr2	stalkie_big_nohaplotig	exon	37136551	37137026	100	+	.	Parent=comp150518_c0_seq1.mrna1;Target=comp150518_c0_seq1 323 798 -
Chr2	stalkie_big_nohaplotig	exon	37138877	37139177	99	+	.	Parent=comp150518_c0_seq1.mrna1;Target=comp150518_c0_seq1 23 322 -
Chr2	stalkie_big_nohaplotig	exon	37139616	37139637	100	+	.	Parent=comp150518_c0_seq1.mrna1;Target=comp150518_c0_seq1 1 22 -
Chr2	stalkie_big_nohaplotig	CDS	37139087	37139177	.	+	0	Parent=comp150518_c0_seq1.mrna1;Target=comp150518_c0_seq1 23 113 .
Chr2	stalkie_big_nohaplotig	CDS	37139616	37139635	.	+	2	Parent=comp150518_c0_seq1.mrna1;Target=comp150518_c0_seq1 3 22 .
Chr2	stalkie_big_nohaplotig	mRNA	37145993	37146439	.	-	.	ID=comp145823_c0_seq1.mrna1;geneID=comp145823_c0_seq1.path1;Name=comp145823_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=447;mismatches=0;indels=0;unknowns=0;Target=comp145823_c0_seq1 447 1 .;CDS_Target=comp145823_c0_seq1 445 359 .;locus=RLOC_00016482
Chr2	stalkie_big_nohaplotig	exon	37145993	37146439	100	-	.	Parent=comp145823_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37145995	37146081	.	-	0	Parent=comp145823_c0_seq1.mrna1
Chr2	gffcl	locus	37153949	37159870	.	-	.	ID=RLOC_00016483;geneIDs=FBgn0011726.1.path1,comp154287_c0_seq1.path1;transcripts=FBgn0011726.1.mrna1,comp154287_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37153949	37157794	.	-	.	ID=FBgn0011726.1.mrna1;geneID=FBgn0011726.1.path1;Name=FBgn0011726.1;Dir=sensecoverage=100.0;identity=100.0;matches=462;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016483
Chr2	stalkie_big_nohaplotig	exon	37153949	37154092	100	-	.	Parent=FBgn0011726.1.mrna1;Target=FBgn0011726.1 319 462 +
Chr2	stalkie_big_nohaplotig	exon	37154162	37154267	100	-	.	Parent=FBgn0011726.1.mrna1;Target=FBgn0011726.1 213 318 +
Chr2	stalkie_big_nohaplotig	exon	37155857	37156047	100	-	.	Parent=FBgn0011726.1.mrna1;Target=FBgn0011726.1 22 212 +
Chr2	stalkie_big_nohaplotig	exon	37157774	37157794	100	-	.	Parent=FBgn0011726.1.mrna1;Target=FBgn0011726.1 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	37153949	37154092	.	-	0	Parent=FBgn0011726.1.mrna1;Target=FBgn0011726.1 319 462 +
Chr2	stalkie_big_nohaplotig	CDS	37154162	37154267	.	-	1	Parent=FBgn0011726.1.mrna1;Target=FBgn0011726.1 213 318 +
Chr2	stalkie_big_nohaplotig	CDS	37155857	37156047	.	-	0	Parent=FBgn0011726.1.mrna1;Target=FBgn0011726.1 22 212 +
Chr2	stalkie_big_nohaplotig	CDS	37157774	37157794	.	-	0	Parent=FBgn0011726.1.mrna1;Target=FBgn0011726.1 1 21 +
Chr2	stalkie_big_nohaplotig	mRNA	37156001	37159870	.	-	.	ID=comp154287_c0_seq1.mrna1;geneID=comp154287_c0_seq1.path1;Name=comp154287_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.2;matches=495;mismatches=16;indels=9;unknowns=0;Target=comp154287_c0_seq1 63 1 .;locus=RLOC_00016483
Chr2	stalkie_big_nohaplotig	exon	37156001	37156047	97	-	.	Parent=comp154287_c0_seq1.mrna1;Target=comp154287_c0_seq1 514 468 .
Chr2	stalkie_big_nohaplotig	exon	37159401	37159870	94	-	.	Parent=comp154287_c0_seq1.mrna1;Target=comp154287_c0_seq1 467 1 .
Chr2	stalkie_big_nohaplotig	CDS	37159808	37159870	.	-	0	Parent=comp154287_c0_seq1.mrna1
Chr2	gffcl	locus	37154326	37155639	.	+	.	ID=RLOC_00016484;geneIDs=comp152627_c0_seq1.path1;transcripts=comp152627_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37154326	37155639	.	+	.	ID=comp152627_c0_seq1.mrna1;geneID=comp152627_c0_seq1.path1;Name=comp152627_c0_seq1;Dir=indeterminatecoverage=94.3;identity=97.7;matches=1174;mismatches=16;indels=12;unknowns=0;Target=comp152627_c0_seq1 501 400 .;locus=RLOC_00016484
Chr2	stalkie_big_nohaplotig	exon	37154326	37155104	99	+	.	Parent=comp152627_c0_seq1.mrna1;Target=comp152627_c0_seq1 852 73 .
Chr2	stalkie_big_nohaplotig	exon	37155218	37155639	94	+	.	Parent=comp152627_c0_seq1.mrna1;Target=comp152627_c0_seq1 1263 853 .
Chr2	stalkie_big_nohaplotig	CDS	37154653	37154753	.	+	0	Parent=comp152627_c0_seq1.mrna1
Chr2	gffcl	locus	37162279	37163280	.	.	.	ID=RLOC_00016485;geneIDs=FBgn0013325.1.path1,comp92943_c0_seq1.path2,comp113152_c0_seq1.path1;transcripts=FBgn0013325.1.mrna1,comp113152_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37162451	37163280	.	+	.	ID=FBgn0013325.1.mrna1;geneID=FBgn0013325.1.path1;Name=FBgn0013325.1;Dir=sensecoverage=100.0;identity=99.3;matches=545;mismatches=3;indels=1;unknowns=0;Target=FBgn0013325.1 3 38 +;locus=RLOC_00016485
Chr2	stalkie_big_nohaplotig	exon	37162451	37162575	99	+	.	Parent=FBgn0013325.1.mrna1;Target=FBgn0013325.1 1 126 +
Chr2	stalkie_big_nohaplotig	exon	37162630	37162927	98	+	.	Parent=FBgn0013325.1.mrna1;Target=FBgn0013325.1 127 424 +
Chr2	stalkie_big_nohaplotig	exon	37163156	37163280	100	+	.	Parent=FBgn0013325.1.mrna1;Target=FBgn0013325.1 425 549 +
Chr2	stalkie_big_nohaplotig	CDS	37162453	37162487	.	+	0	Parent=FBgn0013325.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37162907	37163202	.	+	.	ID=comp113152_c0_seq1.mrna1;geneID=comp113152_c0_seq1.path1;Name=comp113152_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=290;mismatches=6;indels=0;unknowns=0;Target=comp113152_c0_seq1 296 1 .;CDS_Target=comp113152_c0_seq1 86 3 .;locus=RLOC_00016485
Chr2	stalkie_big_nohaplotig	exon	37162907	37163202	97	+	.	Parent=comp113152_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37162909	37162992	.	+	0	Parent=comp113152_c0_seq1.mrna1
Chr2	gffcl	locus	37170969	37172744	.	-	.	ID=RLOC_00016486;geneIDs=comp159257_c1_seq1.path4;transcripts=comp159257_c1_seq1.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	37170969	37172744	.	-	.	ID=comp159257_c1_seq1.mrna4;geneID=comp159257_c1_seq1.path4;Name=comp159257_c1_seq1;Dir=sensecoverage=100.0;identity=97.9;matches=1285;mismatches=15;indels=12;unknowns=0;locus=RLOC_00016486
Chr2	stalkie_big_nohaplotig	exon	37170969	37171240	95	-	.	Parent=comp159257_c1_seq1.mrna4;Target=comp159257_c1_seq1 1033 1308 +
Chr2	stalkie_big_nohaplotig	exon	37171354	37171428	93	-	.	Parent=comp159257_c1_seq1.mrna4;Target=comp159257_c1_seq1 957 1032 +
Chr2	stalkie_big_nohaplotig	exon	37171499	37171526	100	-	.	Parent=comp159257_c1_seq1.mrna4;Target=comp159257_c1_seq1 929 956 +
Chr2	stalkie_big_nohaplotig	exon	37171591	37171839	99	-	.	Parent=comp159257_c1_seq1.mrna4;Target=comp159257_c1_seq1 680 928 +
Chr2	stalkie_big_nohaplotig	exon	37171929	37171982	94	-	.	Parent=comp159257_c1_seq1.mrna4;Target=comp159257_c1_seq1 626 679 +
Chr2	stalkie_big_nohaplotig	exon	37172119	37172744	99	-	.	Parent=comp159257_c1_seq1.mrna4;Target=comp159257_c1_seq1 1 625 +
Chr2	stalkie_big_nohaplotig	CDS	37171365	37171428	.	-	2	Parent=comp159257_c1_seq1.mrna4;Target=comp159257_c1_seq1 957 1021 +
Chr2	stalkie_big_nohaplotig	CDS	37171499	37171526	.	-	0	Parent=comp159257_c1_seq1.mrna4;Target=comp159257_c1_seq1 929 956 +
Chr2	stalkie_big_nohaplotig	CDS	37171591	37171839	.	-	0	Parent=comp159257_c1_seq1.mrna4;Target=comp159257_c1_seq1 680 928 +
Chr2	stalkie_big_nohaplotig	CDS	37171929	37171982	.	-	0	Parent=comp159257_c1_seq1.mrna4;Target=comp159257_c1_seq1 626 679 +
Chr2	stalkie_big_nohaplotig	CDS	37172119	37172142	.	-	0	Parent=comp159257_c1_seq1.mrna4;Target=comp159257_c1_seq1 602 625 +
Chr2	gffcl	locus	37178792	37179736	.	-	.	ID=RLOC_00016488;geneIDs=comp164073_c0_seq1.path1;transcripts=comp164073_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37178792	37179736	.	-	.	ID=comp164073_c0_seq1.mrna1;geneID=comp164073_c0_seq1.path1;Name=comp164073_c0_seq1;Dir=sensecoverage=96.6;identity=99.4;matches=476;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016488
Chr2	stalkie_big_nohaplotig	exon	37178792	37178927	100	-	.	Parent=comp164073_c0_seq1.mrna1;Target=comp164073_c0_seq1 344 479 +
Chr2	stalkie_big_nohaplotig	exon	37179329	37179432	100	-	.	Parent=comp164073_c0_seq1.mrna1;Target=comp164073_c0_seq1 240 343 +
Chr2	stalkie_big_nohaplotig	exon	37179498	37179736	98	-	.	Parent=comp164073_c0_seq1.mrna1;Target=comp164073_c0_seq1 1 239 +
Chr2	stalkie_big_nohaplotig	CDS	37178879	37178927	.	-	1	Parent=comp164073_c0_seq1.mrna1;Target=comp164073_c0_seq1 344 392 +
Chr2	stalkie_big_nohaplotig	CDS	37179329	37179432	.	-	0	Parent=comp164073_c0_seq1.mrna1;Target=comp164073_c0_seq1 240 343 +
Chr2	stalkie_big_nohaplotig	CDS	37179498	37179500	.	-	0	Parent=comp164073_c0_seq1.mrna1;Target=comp164073_c0_seq1 237 239 +
Chr2	gffcl	locus	37181037	37198833	.	+	.	ID=RLOC_00016489;geneIDs=FBgn0023081.1.path1;transcripts=FBgn0023081.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37181037	37198833	.	+	.	ID=FBgn0023081.1.mrna1;geneID=FBgn0023081.1.path1;Name=FBgn0023081.1;Dir=sensecoverage=100.0;identity=99.6;matches=5233;mismatches=20;indels=0;unknowns=0;locus=RLOC_00016489
Chr2	stalkie_big_nohaplotig	exon	37181037	37181112	100	+	.	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 1 76 +
Chr2	stalkie_big_nohaplotig	exon	37182005	37182250	100	+	.	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 77 322 +
Chr2	stalkie_big_nohaplotig	exon	37183395	37183666	99	+	.	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 323 594 +
Chr2	stalkie_big_nohaplotig	exon	37184161	37185408	99	+	.	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 595 1842 +
Chr2	stalkie_big_nohaplotig	exon	37185467	37186077	99	+	.	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 1843 2453 +
Chr2	stalkie_big_nohaplotig	exon	37186308	37186450	99	+	.	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 2454 2596 +
Chr2	stalkie_big_nohaplotig	exon	37186534	37186708	100	+	.	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 2597 2771 +
Chr2	stalkie_big_nohaplotig	exon	37186881	37186987	100	+	.	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 2772 2878 +
Chr2	stalkie_big_nohaplotig	exon	37193902	37194011	100	+	.	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 2879 2988 +
Chr2	stalkie_big_nohaplotig	exon	37194542	37195246	99	+	.	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 2989 3693 +
Chr2	stalkie_big_nohaplotig	exon	37195316	37195592	99	+	.	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 3694 3970 +
Chr2	stalkie_big_nohaplotig	exon	37195667	37196095	99	+	.	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 3971 4399 +
Chr2	stalkie_big_nohaplotig	exon	37196188	37196388	99	+	.	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 4400 4600 +
Chr2	stalkie_big_nohaplotig	exon	37196447	37196632	100	+	.	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 4601 4786 +
Chr2	stalkie_big_nohaplotig	exon	37196694	37196778	98	+	.	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 4787 4871 +
Chr2	stalkie_big_nohaplotig	exon	37196833	37197032	99	+	.	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 4872 5071 +
Chr2	stalkie_big_nohaplotig	exon	37197098	37197195	100	+	.	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 5072 5169 +
Chr2	stalkie_big_nohaplotig	exon	37198750	37198833	100	+	.	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 5170 5253 +
Chr2	stalkie_big_nohaplotig	CDS	37181037	37181112	.	+	0	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 1 76 +
Chr2	stalkie_big_nohaplotig	CDS	37182005	37182250	.	+	2	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 77 322 +
Chr2	stalkie_big_nohaplotig	CDS	37183395	37183666	.	+	2	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 323 594 +
Chr2	stalkie_big_nohaplotig	CDS	37184161	37185408	.	+	0	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 595 1842 +
Chr2	stalkie_big_nohaplotig	CDS	37185467	37186077	.	+	0	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 1843 2453 +
Chr2	stalkie_big_nohaplotig	CDS	37186308	37186450	.	+	1	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 2454 2596 +
Chr2	stalkie_big_nohaplotig	CDS	37186534	37186708	.	+	2	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 2597 2771 +
Chr2	stalkie_big_nohaplotig	CDS	37186881	37186987	.	+	1	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 2772 2878 +
Chr2	stalkie_big_nohaplotig	CDS	37193902	37194011	.	+	2	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 2879 2988 +
Chr2	stalkie_big_nohaplotig	CDS	37194542	37195246	.	+	0	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 2989 3693 +
Chr2	stalkie_big_nohaplotig	CDS	37195316	37195592	.	+	0	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 3694 3970 +
Chr2	stalkie_big_nohaplotig	CDS	37195667	37196095	.	+	2	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 3971 4399 +
Chr2	stalkie_big_nohaplotig	CDS	37196188	37196388	.	+	2	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 4400 4600 +
Chr2	stalkie_big_nohaplotig	CDS	37196447	37196632	.	+	2	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 4601 4786 +
Chr2	stalkie_big_nohaplotig	CDS	37196694	37196778	.	+	2	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 4787 4871 +
Chr2	stalkie_big_nohaplotig	CDS	37196833	37197032	.	+	1	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 4872 5071 +
Chr2	stalkie_big_nohaplotig	CDS	37197098	37197195	.	+	2	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 5072 5169 +
Chr2	stalkie_big_nohaplotig	CDS	37198750	37198833	.	+	0	Parent=FBgn0023081.1.mrna1;Target=FBgn0023081.1 5170 5253 +
Chr2	gffcl	locus	37199344	37199606	.	+	.	ID=RLOC_00016490;geneIDs=comp773362_c0_seq1.path1;transcripts=comp773362_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37199344	37199606	.	+	.	ID=comp773362_c0_seq1.mrna1;geneID=comp773362_c0_seq1.path1;Name=comp773362_c0_seq1;Dir=indeterminatecoverage=86.6;identity=99.6;matches=263;mismatches=0;indels=1;unknowns=0;Target=comp773362_c0_seq1 305 42 .;CDS_Target=comp773362_c0_seq1 304 167 .;locus=RLOC_00016490
Chr2	stalkie_big_nohaplotig	exon	37199344	37199606	99	+	.	Parent=comp773362_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37199468	37199605	.	+	0	Parent=comp773362_c0_seq1.mrna1
Chr2	gffcl	locus	37208876	37209853	.	-	.	ID=RLOC_00016491;geneIDs=comp197224_c0_seq1.path1;transcripts=comp197224_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37208876	37209853	.	-	.	ID=comp197224_c0_seq1.mrna1;geneID=comp197224_c0_seq1.path1;Name=comp197224_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=350;mismatches=0;indels=0;unknowns=0;Target=comp197224_c0_seq1 231 350 .;locus=RLOC_00016491
Chr2	stalkie_big_nohaplotig	exon	37208876	37208899	100	-	.	Parent=comp197224_c0_seq1.mrna1;Target=comp197224_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	exon	37209528	37209853	100	-	.	Parent=comp197224_c0_seq1.mrna1;Target=comp197224_c0_seq1 25 350 -
Chr2	stalkie_big_nohaplotig	CDS	37209734	37209853	.	-	0	Parent=comp197224_c0_seq1.mrna1
Chr2	gffcl	locus	37214981	37215779	.	+	.	ID=RLOC_00016492;geneIDs=FBgn0261597.2.path1,comp146950_c0_seq1.path1;transcripts=FBgn0261597.2.mrna1,comp146950_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37214981	37215779	.	+	.	ID=FBgn0261597.2.mrna1;geneID=FBgn0261597.2.path1;Name=FBgn0261597.2;Dir=sensecoverage=100.0;identity=99.7;matches=377;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016492
Chr2	stalkie_big_nohaplotig	exon	37214981	37215022	100	+	.	Parent=FBgn0261597.2.mrna1;Target=FBgn0261597.2 1 42 +
Chr2	stalkie_big_nohaplotig	exon	37215382	37215559	99	+	.	Parent=FBgn0261597.2.mrna1;Target=FBgn0261597.2 43 220 +
Chr2	stalkie_big_nohaplotig	exon	37215622	37215779	100	+	.	Parent=FBgn0261597.2.mrna1;Target=FBgn0261597.2 221 378 +
Chr2	stalkie_big_nohaplotig	CDS	37214981	37215022	.	+	0	Parent=FBgn0261597.2.mrna1;Target=FBgn0261597.2 1 42 +
Chr2	stalkie_big_nohaplotig	CDS	37215382	37215559	.	+	0	Parent=FBgn0261597.2.mrna1;Target=FBgn0261597.2 43 220 +
Chr2	stalkie_big_nohaplotig	CDS	37215622	37215779	.	+	2	Parent=FBgn0261597.2.mrna1;Target=FBgn0261597.2 221 378 +
Chr2	stalkie_big_nohaplotig	mRNA	37214999	37215403	.	+	.	ID=comp146950_c0_seq1.mrna1;geneID=comp146950_c0_seq1.path1;Name=comp146950_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.8;matches=392;mismatches=11;indels=2;unknowns=0;Target=comp146950_c0_seq1 403 1 .;CDS_Target=comp146950_c0_seq1 249 130 .;locus=RLOC_00016492
Chr2	stalkie_big_nohaplotig	exon	37214999	37215403	96	+	.	Parent=comp146950_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37215128	37215249	.	+	0	Parent=comp146950_c0_seq1.mrna1
Chr2	gffcl	locus	37215819	37216465	.	-	.	ID=RLOC_00016493;geneIDs=comp155330_c0_seq1.path1;transcripts=comp155330_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37215819	37216465	.	-	.	ID=comp155330_c0_seq1.mrna1;geneID=comp155330_c0_seq1.path1;Name=comp155330_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=647;mismatches=0;indels=0;unknowns=0;Target=comp155330_c0_seq1 647 1 .;CDS_Target=comp155330_c0_seq1 558 388 .;locus=RLOC_00016493
Chr2	stalkie_big_nohaplotig	exon	37215819	37216465	100	-	.	Parent=comp155330_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37215908	37216078	.	-	0	Parent=comp155330_c0_seq1.mrna1
Chr2	gffcl	locus	37219247	37227221	.	+	.	ID=RLOC_00016494;geneIDs=FBgn0025806.1.path1;transcripts=FBgn0025806.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37219247	37227221	.	+	.	ID=FBgn0025806.1.mrna1;geneID=FBgn0025806.1.path1;Name=FBgn0025806.1;Dir=sensecoverage=100.0;identity=100.0;matches=654;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016494
Chr2	stalkie_big_nohaplotig	exon	37219247	37219489	100	+	.	Parent=FBgn0025806.1.mrna1;Target=FBgn0025806.1 1 243 +
Chr2	stalkie_big_nohaplotig	exon	37224391	37224528	100	+	.	Parent=FBgn0025806.1.mrna1;Target=FBgn0025806.1 244 381 +
Chr2	stalkie_big_nohaplotig	exon	37226892	37227009	100	+	.	Parent=FBgn0025806.1.mrna1;Target=FBgn0025806.1 382 499 +
Chr2	stalkie_big_nohaplotig	exon	37227067	37227221	100	+	.	Parent=FBgn0025806.1.mrna1;Target=FBgn0025806.1 500 654 +
Chr2	stalkie_big_nohaplotig	CDS	37219247	37219489	.	+	0	Parent=FBgn0025806.1.mrna1;Target=FBgn0025806.1 1 243 +
Chr2	stalkie_big_nohaplotig	CDS	37224391	37224528	.	+	0	Parent=FBgn0025806.1.mrna1;Target=FBgn0025806.1 244 381 +
Chr2	stalkie_big_nohaplotig	CDS	37226892	37227009	.	+	0	Parent=FBgn0025806.1.mrna1;Target=FBgn0025806.1 382 499 +
Chr2	stalkie_big_nohaplotig	CDS	37227067	37227221	.	+	2	Parent=FBgn0025806.1.mrna1;Target=FBgn0025806.1 500 654 +
Chr2	gffcl	locus	37239671	37240921	.	+	.	ID=RLOC_00016495;geneIDs=FBgn0029929.1.path1;transcripts=FBgn0029929.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37239671	37240921	.	+	.	ID=FBgn0029929.1.mrna1;geneID=FBgn0029929.1.path1;Name=FBgn0029929.1;Dir=sensecoverage=100.0;identity=100.0;matches=657;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016495
Chr2	stalkie_big_nohaplotig	exon	37239671	37239776	100	+	.	Parent=FBgn0029929.1.mrna1;Target=FBgn0029929.1 1 106 +
Chr2	stalkie_big_nohaplotig	exon	37240290	37240381	100	+	.	Parent=FBgn0029929.1.mrna1;Target=FBgn0029929.1 107 198 +
Chr2	stalkie_big_nohaplotig	exon	37240463	37240921	100	+	.	Parent=FBgn0029929.1.mrna1;Target=FBgn0029929.1 199 657 +
Chr2	stalkie_big_nohaplotig	CDS	37239671	37239776	.	+	0	Parent=FBgn0029929.1.mrna1;Target=FBgn0029929.1 1 106 +
Chr2	stalkie_big_nohaplotig	CDS	37240290	37240381	.	+	2	Parent=FBgn0029929.1.mrna1;Target=FBgn0029929.1 107 198 +
Chr2	stalkie_big_nohaplotig	CDS	37240463	37240921	.	+	0	Parent=FBgn0029929.1.mrna1;Target=FBgn0029929.1 199 657 +
Chr2	stalkie_big_nohaplotig	mRNA	37245376	37246061	.	-	.	ID=comp118459_c0_seq1.mrna1;geneID=comp118459_c0_seq1.path1;Name=comp118459_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=684;mismatches=2;indels=1;unknowns=0;Target=comp118459_c0_seq1 687 1 .;CDS_Target=comp118459_c0_seq1 359 222 .;locus=RLOC_00016496
Chr2	stalkie_big_nohaplotig	exon	37245376	37246061	99	-	.	Parent=comp118459_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37245703	37245840	.	-	0	Parent=comp118459_c0_seq1.mrna1
Chr2	gffcl	locus	37256292	37257356	.	-	.	ID=RLOC_00016497;geneIDs=FBgn0000221.1.path1;transcripts=FBgn0000221.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37256292	37257356	.	-	.	ID=FBgn0000221.1.mrna1;geneID=FBgn0000221.1.path1;Name=FBgn0000221.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1065;mismatches=0;indels=0;unknowns=0;Target=FBgn0000221.1 1065 1 .;locus=RLOC_00016497
Chr2	stalkie_big_nohaplotig	exon	37256292	37257356	100	-	.	Parent=FBgn0000221.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37256292	37257356	.	-	0	Parent=FBgn0000221.1.mrna1
Chr2	gffcl	locus	37259061	37265524	.	.	.	ID=RLOC_00016498;geneIDs=comp143119_c1_seq1.path1,comp160989_c1_seq1.path1;transcripts=comp160989_c1_seq1.mrna1,comp143119_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37259061	37265524	.	-	.	ID=comp160989_c1_seq1.mrna1;geneID=comp160989_c1_seq1.path1;Name=comp160989_c1_seq1;Dir=antisensecoverage=17.4;identity=96.5;matches=1690;mismatches=34;indels=27;unknowns=0;locus=RLOC_00016498
Chr2	stalkie_big_nohaplotig	exon	37259061	37259069	100	-	.	Parent=comp160989_c1_seq1.mrna1;Target=comp160989_c1_seq1 5326 5334 -
Chr2	stalkie_big_nohaplotig	exon	37259774	37259788	44	-	.	Parent=comp160989_c1_seq1.mrna1;Target=comp160989_c1_seq1 5366 5399 -
Chr2	stalkie_big_nohaplotig	exon	37261997	37262007	100	-	.	Parent=comp160989_c1_seq1.mrna1;Target=comp160989_c1_seq1 5400 5410 -
Chr2	stalkie_big_nohaplotig	exon	37262889	37262924	47	-	.	Parent=comp160989_c1_seq1.mrna1;Target=comp160989_c1_seq1 5434 5474 -
Chr2	stalkie_big_nohaplotig	exon	37263151	37263160	100	-	.	Parent=comp160989_c1_seq1.mrna1;Target=comp160989_c1_seq1 5475 5484 -
Chr2	stalkie_big_nohaplotig	exon	37263826	37265239	98	-	.	Parent=comp160989_c1_seq1.mrna1;Target=comp160989_c1_seq1 5485 6899 -
Chr2	stalkie_big_nohaplotig	exon	37265296	37265524	100	-	.	Parent=comp160989_c1_seq1.mrna1;Target=comp160989_c1_seq1 6900 7128 -
Chr2	stalkie_big_nohaplotig	CDS	37264495	37265239	.	-	1	Parent=comp160989_c1_seq1.mrna1;Target=comp160989_c1_seq1 6155 6899 .
Chr2	stalkie_big_nohaplotig	CDS	37265296	37265522	.	-	0	Parent=comp160989_c1_seq1.mrna1;Target=comp160989_c1_seq1 6900 7126 .
Chr2	stalkie_big_nohaplotig	mRNA	37263451	37263832	.	+	.	ID=comp143119_c1_seq1.mrna1;geneID=comp143119_c1_seq1.path1;Name=comp143119_c1_seq1;Dir=indeterminatecoverage=97.7;identity=96.1;matches=370;mismatches=10;indels=5;unknowns=0;Target=comp143119_c1_seq1 392 10 .;CDS_Target=comp143119_c1_seq1 359 237 .;locus=RLOC_00016498
Chr2	stalkie_big_nohaplotig	exon	37263451	37263832	96	+	.	Parent=comp143119_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37263677	37263799	.	+	0	Parent=comp143119_c1_seq1.mrna1
Chr2	gffcl	locus	37334433	37336179	.	+	.	ID=RLOC_00016499;geneIDs=CPIJ001144.1.path1;transcripts=CPIJ001144.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37334433	37336179	.	+	.	ID=CPIJ001144.1.mrna1;geneID=CPIJ001144.1.path1;Name=CPIJ001144.1;Dir=sensecoverage=100.0;identity=97.1;matches=1378;mismatches=41;indels=0;unknowns=0;locus=RLOC_00016499
Chr2	stalkie_big_nohaplotig	exon	37334433	37334816	95	+	.	Parent=CPIJ001144.1.mrna1;Target=CPIJ001144.1 1 384 +
Chr2	stalkie_big_nohaplotig	exon	37334988	37335386	96	+	.	Parent=CPIJ001144.1.mrna1;Target=CPIJ001144.1 385 783 +
Chr2	stalkie_big_nohaplotig	exon	37335544	37336179	97	+	.	Parent=CPIJ001144.1.mrna1;Target=CPIJ001144.1 784 1419 +
Chr2	stalkie_big_nohaplotig	CDS	37334433	37334816	.	+	0	Parent=CPIJ001144.1.mrna1;Target=CPIJ001144.1 1 384 +
Chr2	stalkie_big_nohaplotig	CDS	37334988	37335386	.	+	0	Parent=CPIJ001144.1.mrna1;Target=CPIJ001144.1 385 783 +
Chr2	stalkie_big_nohaplotig	CDS	37335544	37336179	.	+	0	Parent=CPIJ001144.1.mrna1;Target=CPIJ001144.1 784 1419 +
Chr2	gffcl	locus	37347825	37348904	.	+	.	ID=RLOC_00016500;geneIDs=FBgn0025335.1.path1;transcripts=FBgn0025335.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37347825	37348904	.	+	.	ID=FBgn0025335.1.mrna1;geneID=FBgn0025335.1.path1;Name=FBgn0025335.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1079;mismatches=1;indels=0;unknowns=0;Target=FBgn0025335.1 1080 1 .;locus=RLOC_00016500
Chr2	stalkie_big_nohaplotig	exon	37347825	37348904	99	+	.	Parent=FBgn0025335.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37347825	37348904	.	+	0	Parent=FBgn0025335.1.mrna1
Chr2	gffcl	locus	37349221	37349984	.	-	.	ID=RLOC_00016501;geneIDs=FBgn0034919.1.path1;transcripts=FBgn0034919.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37349221	37349984	.	-	.	ID=FBgn0034919.1.mrna1;geneID=FBgn0034919.1.path1;Name=FBgn0034919.1;Dir=sensecoverage=100.0;identity=100.0;matches=615;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016501
Chr2	stalkie_big_nohaplotig	exon	37349221	37349361	100	-	.	Parent=FBgn0034919.1.mrna1;Target=FBgn0034919.1 475 615 +
Chr2	stalkie_big_nohaplotig	exon	37349458	37349656	100	-	.	Parent=FBgn0034919.1.mrna1;Target=FBgn0034919.1 276 474 +
Chr2	stalkie_big_nohaplotig	exon	37349710	37349984	100	-	.	Parent=FBgn0034919.1.mrna1;Target=FBgn0034919.1 1 275 +
Chr2	stalkie_big_nohaplotig	CDS	37349221	37349361	.	-	0	Parent=FBgn0034919.1.mrna1;Target=FBgn0034919.1 475 615 +
Chr2	stalkie_big_nohaplotig	CDS	37349458	37349656	.	-	1	Parent=FBgn0034919.1.mrna1;Target=FBgn0034919.1 276 474 +
Chr2	stalkie_big_nohaplotig	CDS	37349710	37349984	.	-	0	Parent=FBgn0034919.1.mrna1;Target=FBgn0034919.1 1 275 +
Chr2	stalkie_big_nohaplotig	mRNA	37358650	37568299	.	-	.	ID=comp163166_c0_seq1.mrna1;geneID=comp163166_c0_seq1.path1;Name=comp163166_c0_seq1;Dir=antisensecoverage=91.7;identity=95.7;matches=2424;mismatches=78;indels=31;unknowns=0;locus=RLOC_00016502
Chr2	stalkie_big_nohaplotig	exon	37358650	37359685	99	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 1 1036 -
Chr2	stalkie_big_nohaplotig	exon	37376536	37376934	98	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 1037 1435 -
Chr2	stalkie_big_nohaplotig	exon	37377106	37377506	98	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 1436 1836 -
Chr2	stalkie_big_nohaplotig	exon	37377946	37378187	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 1837 2078 -
Chr2	stalkie_big_nohaplotig	exon	37381918	37381923	50	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2079 2084 -
Chr2	stalkie_big_nohaplotig	exon	37384018	37384021	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2085 2088 -
Chr2	stalkie_big_nohaplotig	exon	37387191	37387198	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2089 2096 -
Chr2	stalkie_big_nohaplotig	exon	37388268	37388271	75	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2097 2100 -
Chr2	stalkie_big_nohaplotig	exon	37389639	37389649	90	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2101 2111 -
Chr2	stalkie_big_nohaplotig	exon	37393598	37393610	84	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2112 2123 -
Chr2	stalkie_big_nohaplotig	exon	37402377	37402391	86	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2132 2146 -
Chr2	stalkie_big_nohaplotig	exon	37413609	37413685	55	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2147 2214 -
Chr2	stalkie_big_nohaplotig	exon	37417125	37417131	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2215 2221 -
Chr2	stalkie_big_nohaplotig	exon	37419885	37419896	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2222 2233 -
Chr2	stalkie_big_nohaplotig	exon	37421596	37421601	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2234 2239 -
Chr2	stalkie_big_nohaplotig	exon	37423394	37423399	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2240 2245 -
Chr2	stalkie_big_nohaplotig	exon	37430902	37430910	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2246 2254 -
Chr2	stalkie_big_nohaplotig	exon	37436377	37436382	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2260 2265 -
Chr2	stalkie_big_nohaplotig	exon	37436510	37436519	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2266 2275 -
Chr2	stalkie_big_nohaplotig	exon	37444149	37444156	87	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2276 2283 -
Chr2	stalkie_big_nohaplotig	exon	37449174	37449181	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2284 2291 -
Chr2	stalkie_big_nohaplotig	exon	37456936	37456945	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2292 2301 -
Chr2	stalkie_big_nohaplotig	exon	37458298	37458304	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2302 2308 -
Chr2	stalkie_big_nohaplotig	exon	37460779	37460783	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2309 2313 -
Chr2	stalkie_big_nohaplotig	exon	37460786	37460826	76	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2326 2363 -
Chr2	stalkie_big_nohaplotig	exon	37461148	37461150	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2364 2366 -
Chr2	stalkie_big_nohaplotig	exon	37465454	37465457	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2367 2370 -
Chr2	stalkie_big_nohaplotig	exon	37467378	37467406	58	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2371 2398 -
Chr2	stalkie_big_nohaplotig	exon	37473977	37473986	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2399 2408 -
Chr2	stalkie_big_nohaplotig	exon	37475116	37475123	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2409 2416 -
Chr2	stalkie_big_nohaplotig	exon	37475188	37475201	92	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2417 2430 -
Chr2	stalkie_big_nohaplotig	exon	37481810	37481816	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2431 2437 -
Chr2	stalkie_big_nohaplotig	exon	37481833	37481836	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2475 2478 -
Chr2	stalkie_big_nohaplotig	exon	37488940	37488944	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2479 2483 -
Chr2	stalkie_big_nohaplotig	exon	37494425	37494429	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2484 2488 -
Chr2	stalkie_big_nohaplotig	exon	37500638	37500645	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2489 2496 -
Chr2	stalkie_big_nohaplotig	exon	37507171	37507176	83	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2497 2502 -
Chr2	stalkie_big_nohaplotig	exon	37510091	37510108	88	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2503 2520 -
Chr2	stalkie_big_nohaplotig	exon	37521061	37521065	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2521 2525 -
Chr2	stalkie_big_nohaplotig	exon	37523427	37523428	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2526 2527 -
Chr2	stalkie_big_nohaplotig	exon	37527488	37527507	48	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2528 2560 -
Chr2	stalkie_big_nohaplotig	exon	37528499	37528506	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2561 2568 -
Chr2	stalkie_big_nohaplotig	exon	37551908	37551910	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2569 2571 -
Chr2	stalkie_big_nohaplotig	exon	37568293	37568299	100	-	.	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 2572 2578 -
Chr2	stalkie_big_nohaplotig	CDS	37359047	37359685	.	-	0	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 398 1036 .
Chr2	stalkie_big_nohaplotig	CDS	37376536	37376934	.	-	0	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 1037 1435 .
Chr2	stalkie_big_nohaplotig	CDS	37377106	37377471	.	-	0	Parent=comp163166_c0_seq1.mrna1;Target=comp163166_c0_seq1 1436 1801 .
Chr2	stalkie_big_nohaplotig	mRNA	37413306	37414019	.	-	.	ID=comp154074_c0_seq1.mrna1;geneID=comp154074_c0_seq1.path1;Name=comp154074_c0_seq1;Dir=indeterminatecoverage=98.5;identity=97.0;matches=712;mismatches=2;indels=20;unknowns=0;Target=comp154074_c0_seq1 734 1 .;CDS_Target=comp154074_c0_seq1 72 1 .;locus=RLOC_00016502
Chr2	stalkie_big_nohaplotig	exon	37413306	37414019	97	-	.	Parent=comp154074_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37413948	37414019	.	-	0	Parent=comp154074_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37415319	37417148	.	-	.	ID=comp148754_c0_seq1.mrna1;geneID=comp148754_c0_seq1.path1;Name=comp148754_c0_seq1;Dir=sensecoverage=99.5;identity=99.7;matches=1753;mismatches=4;indels=1;unknowns=0;locus=RLOC_00016502
Chr2	stalkie_big_nohaplotig	exon	37415319	37416347	99	-	.	Parent=comp148754_c0_seq1.mrna1;Target=comp148754_c0_seq1 738 1767 +
Chr2	stalkie_big_nohaplotig	exon	37416421	37417148	99	-	.	Parent=comp148754_c0_seq1.mrna1;Target=comp148754_c0_seq1 10 737 +
Chr2	stalkie_big_nohaplotig	CDS	37416142	37416347	.	-	2	Parent=comp148754_c0_seq1.mrna1;Target=comp148754_c0_seq1 738 943 +
Chr2	stalkie_big_nohaplotig	CDS	37416421	37416799	.	-	0	Parent=comp148754_c0_seq1.mrna1;Target=comp148754_c0_seq1 359 737 +
Chr2	stalkie_big_nohaplotig	mRNA	37502408	37508365	.	-	.	ID=FBgn0034971.1.mrna1;geneID=FBgn0034971.1.path1;Name=FBgn0034971.1;Dir=sensecoverage=100.0;identity=99.9;matches=1436;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016502
Chr2	stalkie_big_nohaplotig	exon	37502408	37502702	100	-	.	Parent=FBgn0034971.1.mrna1;Target=FBgn0034971.1 1143 1437 +
Chr2	stalkie_big_nohaplotig	exon	37504384	37504640	100	-	.	Parent=FBgn0034971.1.mrna1;Target=FBgn0034971.1 886 1142 +
Chr2	stalkie_big_nohaplotig	exon	37505368	37505604	100	-	.	Parent=FBgn0034971.1.mrna1;Target=FBgn0034971.1 649 885 +
Chr2	stalkie_big_nohaplotig	exon	37506959	37507207	100	-	.	Parent=FBgn0034971.1.mrna1;Target=FBgn0034971.1 400 648 +
Chr2	stalkie_big_nohaplotig	exon	37507809	37508042	99	-	.	Parent=FBgn0034971.1.mrna1;Target=FBgn0034971.1 166 399 +
Chr2	stalkie_big_nohaplotig	exon	37508201	37508365	100	-	.	Parent=FBgn0034971.1.mrna1;Target=FBgn0034971.1 1 165 +
Chr2	stalkie_big_nohaplotig	CDS	37502408	37502702	.	-	1	Parent=FBgn0034971.1.mrna1;Target=FBgn0034971.1 1143 1437 +
Chr2	stalkie_big_nohaplotig	CDS	37504384	37504640	.	-	0	Parent=FBgn0034971.1.mrna1;Target=FBgn0034971.1 886 1142 +
Chr2	stalkie_big_nohaplotig	CDS	37505368	37505604	.	-	0	Parent=FBgn0034971.1.mrna1;Target=FBgn0034971.1 649 885 +
Chr2	stalkie_big_nohaplotig	CDS	37506959	37507207	.	-	0	Parent=FBgn0034971.1.mrna1;Target=FBgn0034971.1 400 648 +
Chr2	stalkie_big_nohaplotig	CDS	37507809	37508042	.	-	0	Parent=FBgn0034971.1.mrna1;Target=FBgn0034971.1 166 399 +
Chr2	stalkie_big_nohaplotig	CDS	37508201	37508365	.	-	0	Parent=FBgn0034971.1.mrna1;Target=FBgn0034971.1 1 165 +
Chr2	stalkie_big_nohaplotig	mRNA	37505581	37506410	.	-	.	ID=comp157974_c0_seq1.mrna1;geneID=comp157974_c0_seq1.path1;Name=comp157974_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=815;mismatches=15;indels=5;unknowns=0;Target=comp157974_c0_seq1 835 1 .;CDS_Target=comp157974_c0_seq1 214 125 .;locus=RLOC_00016502
Chr2	stalkie_big_nohaplotig	exon	37505581	37506410	97	-	.	Parent=comp157974_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37506201	37506290	.	-	0	Parent=comp157974_c0_seq1.mrna1
Chr2	gffcl	locus	37384019	37384691	.	+	.	ID=RLOC_00016503;geneIDs=FBgn0034968.1.path1;transcripts=FBgn0034968.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37384019	37384691	.	+	.	ID=FBgn0034968.1.mrna1;geneID=FBgn0034968.1.path1;Name=FBgn0034968.1;Dir=sensecoverage=100.0;identity=100.0;matches=498;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016503
Chr2	stalkie_big_nohaplotig	exon	37384019	37384058	100	+	.	Parent=FBgn0034968.1.mrna1;Target=FBgn0034968.1 1 40 +
Chr2	stalkie_big_nohaplotig	exon	37384115	37384188	100	+	.	Parent=FBgn0034968.1.mrna1;Target=FBgn0034968.1 41 114 +
Chr2	stalkie_big_nohaplotig	exon	37384255	37384435	100	+	.	Parent=FBgn0034968.1.mrna1;Target=FBgn0034968.1 115 295 +
Chr2	stalkie_big_nohaplotig	exon	37384489	37384691	100	+	.	Parent=FBgn0034968.1.mrna1;Target=FBgn0034968.1 296 498 +
Chr2	stalkie_big_nohaplotig	CDS	37384019	37384058	.	+	0	Parent=FBgn0034968.1.mrna1;Target=FBgn0034968.1 1 40 +
Chr2	stalkie_big_nohaplotig	CDS	37384115	37384188	.	+	2	Parent=FBgn0034968.1.mrna1;Target=FBgn0034968.1 41 114 +
Chr2	stalkie_big_nohaplotig	CDS	37384255	37384435	.	+	0	Parent=FBgn0034968.1.mrna1;Target=FBgn0034968.1 115 295 +
Chr2	stalkie_big_nohaplotig	CDS	37384489	37384691	.	+	2	Parent=FBgn0034968.1.mrna1;Target=FBgn0034968.1 296 498 +
Chr2	gffcl	locus	37398183	37398917	.	+	.	ID=RLOC_00016505;geneIDs=FBgn0034967.4.path1;transcripts=FBgn0034967.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37398183	37398917	.	+	.	ID=FBgn0034967.4.mrna1;geneID=FBgn0034967.4.path1;Name=FBgn0034967.4;Dir=sensecoverage=100.0;identity=100.0;matches=486;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016505
Chr2	stalkie_big_nohaplotig	exon	37398183	37398397	100	+	.	Parent=FBgn0034967.4.mrna1;Target=FBgn0034967.4 1 215 +
Chr2	stalkie_big_nohaplotig	exon	37398576	37398777	100	+	.	Parent=FBgn0034967.4.mrna1;Target=FBgn0034967.4 216 417 +
Chr2	stalkie_big_nohaplotig	exon	37398849	37398917	100	+	.	Parent=FBgn0034967.4.mrna1;Target=FBgn0034967.4 418 486 +
Chr2	stalkie_big_nohaplotig	CDS	37398183	37398397	.	+	0	Parent=FBgn0034967.4.mrna1;Target=FBgn0034967.4 1 215 +
Chr2	stalkie_big_nohaplotig	CDS	37398576	37398777	.	+	1	Parent=FBgn0034967.4.mrna1;Target=FBgn0034967.4 216 417 +
Chr2	stalkie_big_nohaplotig	CDS	37398849	37398917	.	+	0	Parent=FBgn0034967.4.mrna1;Target=FBgn0034967.4 418 486 +
Chr2	gffcl	locus	37403564	37412900	.	+	.	ID=RLOC_00016506;geneIDs=FBgn0034976.1.path1;transcripts=FBgn0034976.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37403564	37412900	.	+	.	ID=FBgn0034976.1.mrna1;geneID=FBgn0034976.1.path1;Name=FBgn0034976.1;Dir=sensecoverage=99.9;identity=99.8;matches=5308;mismatches=6;indels=6;unknowns=0;locus=RLOC_00016506
Chr2	stalkie_big_nohaplotig	exon	37403564	37405960	99	+	.	Parent=FBgn0034976.1.mrna1;Target=FBgn0034976.1 6 2396 +
Chr2	stalkie_big_nohaplotig	exon	37407756	37408423	100	+	.	Parent=FBgn0034976.1.mrna1;Target=FBgn0034976.1 2397 3064 +
Chr2	stalkie_big_nohaplotig	exon	37408965	37409163	100	+	.	Parent=FBgn0034976.1.mrna1;Target=FBgn0034976.1 3065 3263 +
Chr2	stalkie_big_nohaplotig	exon	37409247	37409733	100	+	.	Parent=FBgn0034976.1.mrna1;Target=FBgn0034976.1 3264 3750 +
Chr2	stalkie_big_nohaplotig	exon	37409788	37409917	100	+	.	Parent=FBgn0034976.1.mrna1;Target=FBgn0034976.1 3751 3880 +
Chr2	stalkie_big_nohaplotig	exon	37409986	37410264	100	+	.	Parent=FBgn0034976.1.mrna1;Target=FBgn0034976.1 3881 4159 +
Chr2	stalkie_big_nohaplotig	exon	37410344	37410886	100	+	.	Parent=FBgn0034976.1.mrna1;Target=FBgn0034976.1 4160 4702 +
Chr2	stalkie_big_nohaplotig	exon	37412284	37412900	100	+	.	Parent=FBgn0034976.1.mrna1;Target=FBgn0034976.1 4703 5319 +
Chr2	stalkie_big_nohaplotig	CDS	37403565	37405960	.	+	0	Parent=FBgn0034976.1.mrna1;Target=FBgn0034976.1 7 2396 +
Chr2	stalkie_big_nohaplotig	CDS	37407756	37408423	.	+	1	Parent=FBgn0034976.1.mrna1;Target=FBgn0034976.1 2397 3064 +
Chr2	stalkie_big_nohaplotig	CDS	37408965	37409163	.	+	2	Parent=FBgn0034976.1.mrna1;Target=FBgn0034976.1 3065 3263 +
Chr2	stalkie_big_nohaplotig	CDS	37409247	37409733	.	+	1	Parent=FBgn0034976.1.mrna1;Target=FBgn0034976.1 3264 3750 +
Chr2	stalkie_big_nohaplotig	CDS	37409788	37409917	.	+	0	Parent=FBgn0034976.1.mrna1;Target=FBgn0034976.1 3751 3880 +
Chr2	stalkie_big_nohaplotig	CDS	37409986	37410264	.	+	2	Parent=FBgn0034976.1.mrna1;Target=FBgn0034976.1 3881 4159 +
Chr2	stalkie_big_nohaplotig	CDS	37410344	37410886	.	+	2	Parent=FBgn0034976.1.mrna1;Target=FBgn0034976.1 4160 4702 +
Chr2	stalkie_big_nohaplotig	CDS	37412284	37412900	.	+	2	Parent=FBgn0034976.1.mrna1;Target=FBgn0034976.1 4703 5319 +
Chr2	gffcl	locus	37418902	37419908	.	+	.	ID=RLOC_00016507;geneIDs=comp135873_c0_seq1.path1;transcripts=comp135873_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37418902	37419908	.	+	.	ID=comp135873_c0_seq1.mrna1;geneID=comp135873_c0_seq1.path1;Name=comp135873_c0_seq1;Dir=sensecoverage=99.8;identity=99.6;matches=558;mismatches=2;indels=0;unknowns=0;Target=comp135873_c0_seq1 218 382 +;locus=RLOC_00016507
Chr2	stalkie_big_nohaplotig	exon	37418902	37419112	99	+	.	Parent=comp135873_c0_seq1.mrna1;Target=comp135873_c0_seq1 1 211 +
Chr2	stalkie_big_nohaplotig	exon	37419560	37419908	99	+	.	Parent=comp135873_c0_seq1.mrna1;Target=comp135873_c0_seq1 212 560 +
Chr2	stalkie_big_nohaplotig	CDS	37419566	37419730	.	+	0	Parent=comp135873_c0_seq1.mrna1
Chr2	gffcl	locus	37422937	37432422	.	-	.	ID=RLOC_00016508;geneIDs=FBgn0023211.1.path1;transcripts=FBgn0023211.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37422937	37432422	.	-	.	ID=FBgn0023211.1.mrna1;geneID=FBgn0023211.1.path1;Name=FBgn0023211.1;Dir=sensecoverage=100.0;identity=100.0;matches=342;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016508
Chr2	stalkie_big_nohaplotig	exon	37422937	37423075	100	-	.	Parent=FBgn0023211.1.mrna1;Target=FBgn0023211.1 204 342 +
Chr2	stalkie_big_nohaplotig	exon	37432220	37432422	100	-	.	Parent=FBgn0023211.1.mrna1;Target=FBgn0023211.1 1 203 +
Chr2	stalkie_big_nohaplotig	CDS	37422937	37423075	.	-	1	Parent=FBgn0023211.1.mrna1;Target=FBgn0023211.1 204 342 +
Chr2	stalkie_big_nohaplotig	CDS	37432220	37432422	.	-	0	Parent=FBgn0023211.1.mrna1;Target=FBgn0023211.1 1 203 +
Chr2	gffcl	locus	37426223	37428642	.	-	.	ID=RLOC_00016509;geneIDs=FBgn0025352.1.path1;transcripts=FBgn0025352.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37426223	37428642	.	-	.	ID=FBgn0025352.1.mrna1;geneID=FBgn0025352.1.path1;Name=FBgn0025352.1;Dir=sensecoverage=100.0;identity=100.0;matches=1434;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016509
Chr2	stalkie_big_nohaplotig	exon	37426223	37426723	100	-	.	Parent=FBgn0025352.1.mrna1;Target=FBgn0025352.1 934 1434 +
Chr2	stalkie_big_nohaplotig	exon	37426779	37426909	100	-	.	Parent=FBgn0025352.1.mrna1;Target=FBgn0025352.1 803 933 +
Chr2	stalkie_big_nohaplotig	exon	37426961	37427135	100	-	.	Parent=FBgn0025352.1.mrna1;Target=FBgn0025352.1 628 802 +
Chr2	stalkie_big_nohaplotig	exon	37427193	37427393	100	-	.	Parent=FBgn0025352.1.mrna1;Target=FBgn0025352.1 427 627 +
Chr2	stalkie_big_nohaplotig	exon	37427596	37427770	100	-	.	Parent=FBgn0025352.1.mrna1;Target=FBgn0025352.1 252 426 +
Chr2	stalkie_big_nohaplotig	exon	37427845	37428004	100	-	.	Parent=FBgn0025352.1.mrna1;Target=FBgn0025352.1 92 251 +
Chr2	stalkie_big_nohaplotig	exon	37428552	37428642	100	-	.	Parent=FBgn0025352.1.mrna1;Target=FBgn0025352.1 1 91 +
Chr2	stalkie_big_nohaplotig	CDS	37426223	37426723	.	-	0	Parent=FBgn0025352.1.mrna1;Target=FBgn0025352.1 934 1434 +
Chr2	stalkie_big_nohaplotig	CDS	37426779	37426909	.	-	2	Parent=FBgn0025352.1.mrna1;Target=FBgn0025352.1 803 933 +
Chr2	stalkie_big_nohaplotig	CDS	37426961	37427135	.	-	0	Parent=FBgn0025352.1.mrna1;Target=FBgn0025352.1 628 802 +
Chr2	stalkie_big_nohaplotig	CDS	37427193	37427393	.	-	0	Parent=FBgn0025352.1.mrna1;Target=FBgn0025352.1 427 627 +
Chr2	stalkie_big_nohaplotig	CDS	37427596	37427770	.	-	1	Parent=FBgn0025352.1.mrna1;Target=FBgn0025352.1 252 426 +
Chr2	stalkie_big_nohaplotig	CDS	37427845	37428004	.	-	2	Parent=FBgn0025352.1.mrna1;Target=FBgn0025352.1 92 251 +
Chr2	stalkie_big_nohaplotig	CDS	37428552	37428642	.	-	0	Parent=FBgn0025352.1.mrna1;Target=FBgn0025352.1 1 91 +
Chr2	gffcl	locus	37439678	37441073	.	+	.	ID=RLOC_00016510;geneIDs=FBgn0025336.1.path1;transcripts=FBgn0025336.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37439678	37441073	.	+	.	ID=FBgn0025336.1.mrna1;geneID=FBgn0025336.1.path1;Name=FBgn0025336.1;Dir=sensecoverage=100.0;identity=99.9;matches=1262;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016510
Chr2	stalkie_big_nohaplotig	exon	37439678	37440274	99	+	.	Parent=FBgn0025336.1.mrna1;Target=FBgn0025336.1 1 597 +
Chr2	stalkie_big_nohaplotig	exon	37440408	37441073	100	+	.	Parent=FBgn0025336.1.mrna1;Target=FBgn0025336.1 598 1263 +
Chr2	stalkie_big_nohaplotig	CDS	37439678	37440274	.	+	0	Parent=FBgn0025336.1.mrna1;Target=FBgn0025336.1 1 597 +
Chr2	stalkie_big_nohaplotig	CDS	37440408	37441073	.	+	0	Parent=FBgn0025336.1.mrna1;Target=FBgn0025336.1 598 1263 +
Chr2	gffcl	locus	37444367	37448500	.	+	.	ID=RLOC_00016511;geneIDs=FBgn0040273.1.path1;transcripts=FBgn0040273.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37444367	37448500	.	+	.	ID=FBgn0040273.1.mrna1;geneID=FBgn0040273.1.path1;Name=FBgn0040273.1;Dir=sensecoverage=100.0;identity=99.9;matches=3248;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016511
Chr2	stalkie_big_nohaplotig	exon	37444367	37444753	99	+	.	Parent=FBgn0040273.1.mrna1;Target=FBgn0040273.1 1 387 +
Chr2	stalkie_big_nohaplotig	exon	37444815	37444939	99	+	.	Parent=FBgn0040273.1.mrna1;Target=FBgn0040273.1 388 512 +
Chr2	stalkie_big_nohaplotig	exon	37445001	37445138	100	+	.	Parent=FBgn0040273.1.mrna1;Target=FBgn0040273.1 513 650 +
Chr2	stalkie_big_nohaplotig	exon	37445195	37445645	100	+	.	Parent=FBgn0040273.1.mrna1;Target=FBgn0040273.1 651 1101 +
Chr2	stalkie_big_nohaplotig	exon	37445701	37445938	100	+	.	Parent=FBgn0040273.1.mrna1;Target=FBgn0040273.1 1102 1339 +
Chr2	stalkie_big_nohaplotig	exon	37446066	37446238	100	+	.	Parent=FBgn0040273.1.mrna1;Target=FBgn0040273.1 1340 1512 +
Chr2	stalkie_big_nohaplotig	exon	37446440	37446693	100	+	.	Parent=FBgn0040273.1.mrna1;Target=FBgn0040273.1 1513 1766 +
Chr2	stalkie_big_nohaplotig	exon	37446748	37446943	100	+	.	Parent=FBgn0040273.1.mrna1;Target=FBgn0040273.1 1767 1962 +
Chr2	stalkie_big_nohaplotig	exon	37446997	37447309	100	+	.	Parent=FBgn0040273.1.mrna1;Target=FBgn0040273.1 1963 2275 +
Chr2	stalkie_big_nohaplotig	exon	37447468	37447878	100	+	.	Parent=FBgn0040273.1.mrna1;Target=FBgn0040273.1 2276 2686 +
Chr2	stalkie_big_nohaplotig	exon	37447935	37448500	100	+	.	Parent=FBgn0040273.1.mrna1;Target=FBgn0040273.1 2687 3252 +
Chr2	stalkie_big_nohaplotig	CDS	37444367	37444753	.	+	0	Parent=FBgn0040273.1.mrna1;Target=FBgn0040273.1 1 387 +
Chr2	stalkie_big_nohaplotig	CDS	37444815	37444939	.	+	0	Parent=FBgn0040273.1.mrna1;Target=FBgn0040273.1 388 512 +
Chr2	stalkie_big_nohaplotig	CDS	37445001	37445138	.	+	1	Parent=FBgn0040273.1.mrna1;Target=FBgn0040273.1 513 650 +
Chr2	stalkie_big_nohaplotig	CDS	37445195	37445645	.	+	1	Parent=FBgn0040273.1.mrna1;Target=FBgn0040273.1 651 1101 +
Chr2	stalkie_big_nohaplotig	CDS	37445701	37445938	.	+	0	Parent=FBgn0040273.1.mrna1;Target=FBgn0040273.1 1102 1339 +
Chr2	stalkie_big_nohaplotig	CDS	37446066	37446238	.	+	2	Parent=FBgn0040273.1.mrna1;Target=FBgn0040273.1 1340 1512 +
Chr2	stalkie_big_nohaplotig	CDS	37446440	37446693	.	+	0	Parent=FBgn0040273.1.mrna1;Target=FBgn0040273.1 1513 1766 +
Chr2	stalkie_big_nohaplotig	CDS	37446748	37446943	.	+	1	Parent=FBgn0040273.1.mrna1;Target=FBgn0040273.1 1767 1962 +
Chr2	stalkie_big_nohaplotig	CDS	37446997	37447309	.	+	0	Parent=FBgn0040273.1.mrna1;Target=FBgn0040273.1 1963 2275 +
Chr2	stalkie_big_nohaplotig	CDS	37447468	37447878	.	+	2	Parent=FBgn0040273.1.mrna1;Target=FBgn0040273.1 2276 2686 +
Chr2	stalkie_big_nohaplotig	CDS	37447935	37448500	.	+	2	Parent=FBgn0040273.1.mrna1;Target=FBgn0040273.1 2687 3252 +
Chr2	gffcl	locus	37456060	37457956	.	+	.	ID=RLOC_00016513;geneIDs=FBgn0014029.1.path1;transcripts=FBgn0014029.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37456060	37457956	.	+	.	ID=FBgn0014029.1.mrna1;geneID=FBgn0014029.1.path1;Name=FBgn0014029.1;Dir=sensecoverage=100.0;identity=100.0;matches=1272;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016513
Chr2	stalkie_big_nohaplotig	exon	37456060	37456104	100	+	.	Parent=FBgn0014029.1.mrna1;Target=FBgn0014029.1 1 45 +
Chr2	stalkie_big_nohaplotig	exon	37456523	37456640	100	+	.	Parent=FBgn0014029.1.mrna1;Target=FBgn0014029.1 46 163 +
Chr2	stalkie_big_nohaplotig	exon	37456690	37457495	100	+	.	Parent=FBgn0014029.1.mrna1;Target=FBgn0014029.1 164 969 +
Chr2	stalkie_big_nohaplotig	exon	37457556	37457693	100	+	.	Parent=FBgn0014029.1.mrna1;Target=FBgn0014029.1 970 1107 +
Chr2	stalkie_big_nohaplotig	exon	37457792	37457956	100	+	.	Parent=FBgn0014029.1.mrna1;Target=FBgn0014029.1 1108 1272 +
Chr2	stalkie_big_nohaplotig	CDS	37456060	37456104	.	+	0	Parent=FBgn0014029.1.mrna1;Target=FBgn0014029.1 1 45 +
Chr2	stalkie_big_nohaplotig	CDS	37456523	37456640	.	+	0	Parent=FBgn0014029.1.mrna1;Target=FBgn0014029.1 46 163 +
Chr2	stalkie_big_nohaplotig	CDS	37456690	37457495	.	+	2	Parent=FBgn0014029.1.mrna1;Target=FBgn0014029.1 164 969 +
Chr2	stalkie_big_nohaplotig	CDS	37457556	37457693	.	+	0	Parent=FBgn0014029.1.mrna1;Target=FBgn0014029.1 970 1107 +
Chr2	stalkie_big_nohaplotig	CDS	37457792	37457956	.	+	0	Parent=FBgn0014029.1.mrna1;Target=FBgn0014029.1 1108 1272 +
Chr2	gffcl	locus	37458383	37460031	.	-	.	ID=RLOC_00016514;geneIDs=FBgn0034928.1.path1;transcripts=FBgn0034928.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37458383	37460031	.	-	.	ID=FBgn0034928.1.mrna1;geneID=FBgn0034928.1.path1;Name=FBgn0034928.1;Dir=sensecoverage=100.0;identity=99.9;matches=1046;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016514
Chr2	stalkie_big_nohaplotig	exon	37458383	37458470	100	-	.	Parent=FBgn0034928.1.mrna1;Target=FBgn0034928.1 960 1047 +
Chr2	stalkie_big_nohaplotig	exon	37458587	37458923	100	-	.	Parent=FBgn0034928.1.mrna1;Target=FBgn0034928.1 623 959 +
Chr2	stalkie_big_nohaplotig	exon	37459094	37459342	100	-	.	Parent=FBgn0034928.1.mrna1;Target=FBgn0034928.1 374 622 +
Chr2	stalkie_big_nohaplotig	exon	37459592	37459737	99	-	.	Parent=FBgn0034928.1.mrna1;Target=FBgn0034928.1 228 373 +
Chr2	stalkie_big_nohaplotig	exon	37459805	37460031	100	-	.	Parent=FBgn0034928.1.mrna1;Target=FBgn0034928.1 1 227 +
Chr2	stalkie_big_nohaplotig	CDS	37458383	37458470	.	-	1	Parent=FBgn0034928.1.mrna1;Target=FBgn0034928.1 960 1047 +
Chr2	stalkie_big_nohaplotig	CDS	37458587	37458923	.	-	2	Parent=FBgn0034928.1.mrna1;Target=FBgn0034928.1 623 959 +
Chr2	stalkie_big_nohaplotig	CDS	37459094	37459342	.	-	2	Parent=FBgn0034928.1.mrna1;Target=FBgn0034928.1 374 622 +
Chr2	stalkie_big_nohaplotig	CDS	37459592	37459737	.	-	1	Parent=FBgn0034928.1.mrna1;Target=FBgn0034928.1 228 373 +
Chr2	stalkie_big_nohaplotig	CDS	37459805	37460031	.	-	0	Parent=FBgn0034928.1.mrna1;Target=FBgn0034928.1 1 227 +
Chr2	gffcl	locus	37463853	37467643	.	+	.	ID=RLOC_00016515;geneIDs=FBgn0020372.1.path1;transcripts=FBgn0020372.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37463853	37467643	.	+	.	ID=FBgn0020372.1.mrna1;geneID=FBgn0020372.1.path1;Name=FBgn0020372.1;Dir=sensecoverage=100.0;identity=100.0;matches=879;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016515
Chr2	stalkie_big_nohaplotig	exon	37463853	37463939	100	+	.	Parent=FBgn0020372.1.mrna1;Target=FBgn0020372.1 1 87 +
Chr2	stalkie_big_nohaplotig	exon	37466667	37466855	100	+	.	Parent=FBgn0020372.1.mrna1;Target=FBgn0020372.1 88 276 +
Chr2	stalkie_big_nohaplotig	exon	37466919	37467104	100	+	.	Parent=FBgn0020372.1.mrna1;Target=FBgn0020372.1 277 462 +
Chr2	stalkie_big_nohaplotig	exon	37467164	37467364	100	+	.	Parent=FBgn0020372.1.mrna1;Target=FBgn0020372.1 463 663 +
Chr2	stalkie_big_nohaplotig	exon	37467428	37467643	100	+	.	Parent=FBgn0020372.1.mrna1;Target=FBgn0020372.1 664 879 +
Chr2	stalkie_big_nohaplotig	CDS	37463853	37463939	.	+	0	Parent=FBgn0020372.1.mrna1;Target=FBgn0020372.1 1 87 +
Chr2	stalkie_big_nohaplotig	CDS	37466667	37466855	.	+	0	Parent=FBgn0020372.1.mrna1;Target=FBgn0020372.1 88 276 +
Chr2	stalkie_big_nohaplotig	CDS	37466919	37467104	.	+	0	Parent=FBgn0020372.1.mrna1;Target=FBgn0020372.1 277 462 +
Chr2	stalkie_big_nohaplotig	CDS	37467164	37467364	.	+	0	Parent=FBgn0020372.1.mrna1;Target=FBgn0020372.1 463 663 +
Chr2	stalkie_big_nohaplotig	CDS	37467428	37467643	.	+	0	Parent=FBgn0020372.1.mrna1;Target=FBgn0020372.1 664 879 +
Chr2	gffcl	locus	37465697	37466590	.	+	.	ID=RLOC_00016516;geneIDs=comp144123_c0_seq1.path1;transcripts=comp144123_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37465697	37466590	.	+	.	ID=comp144123_c0_seq1.mrna1;geneID=comp144123_c0_seq1.path1;Name=comp144123_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=882;mismatches=12;indels=14;unknowns=0;Target=comp144123_c0_seq1 908 1 .;CDS_Target=comp144123_c0_seq1 714 679 .;locus=RLOC_00016516
Chr2	stalkie_big_nohaplotig	exon	37465697	37466590	97	+	.	Parent=comp144123_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37466361	37466396	.	+	0	Parent=comp144123_c0_seq1.mrna1
Chr2	gffcl	locus	37468070	37468355	.	+	.	ID=RLOC_00016517;geneIDs=comp144417_c0_seq1.path1;transcripts=comp144417_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37468070	37468355	.	+	.	ID=comp144417_c0_seq1.mrna1;geneID=comp144417_c0_seq1.path1;Name=comp144417_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=286;mismatches=0;indels=0;unknowns=0;Target=comp144417_c0_seq1 286 1 .;CDS_Target=comp144417_c0_seq1 55 2 .;locus=RLOC_00016517
Chr2	stalkie_big_nohaplotig	exon	37468070	37468355	100	+	.	Parent=comp144417_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37468071	37468124	.	+	0	Parent=comp144417_c0_seq1.mrna1
Chr2	gffcl	locus	37477980	37481262	.	.	.	ID=RLOC_00016518;geneIDs=FBgn0025790.1.path1,comp141844_c0_seq1.path1;transcripts=FBgn0025790.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37478758	37481262	.	+	.	ID=FBgn0025790.1.mrna1;geneID=FBgn0025790.1.path1;Name=FBgn0025790.1;Dir=sensecoverage=100.0;identity=99.8;matches=1680;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016518
Chr2	stalkie_big_nohaplotig	exon	37478758	37479016	100	+	.	Parent=FBgn0025790.1.mrna1;Target=FBgn0025790.1 1 259 +
Chr2	stalkie_big_nohaplotig	exon	37479089	37479399	100	+	.	Parent=FBgn0025790.1.mrna1;Target=FBgn0025790.1 260 570 +
Chr2	stalkie_big_nohaplotig	exon	37479459	37479663	100	+	.	Parent=FBgn0025790.1.mrna1;Target=FBgn0025790.1 571 775 +
Chr2	stalkie_big_nohaplotig	exon	37479730	37480397	99	+	.	Parent=FBgn0025790.1.mrna1;Target=FBgn0025790.1 776 1443 +
Chr2	stalkie_big_nohaplotig	exon	37480967	37481116	99	+	.	Parent=FBgn0025790.1.mrna1;Target=FBgn0025790.1 1444 1593 +
Chr2	stalkie_big_nohaplotig	exon	37481173	37481262	100	+	.	Parent=FBgn0025790.1.mrna1;Target=FBgn0025790.1 1594 1683 +
Chr2	stalkie_big_nohaplotig	CDS	37478758	37479016	.	+	0	Parent=FBgn0025790.1.mrna1;Target=FBgn0025790.1 1 259 +
Chr2	stalkie_big_nohaplotig	CDS	37479089	37479399	.	+	2	Parent=FBgn0025790.1.mrna1;Target=FBgn0025790.1 260 570 +
Chr2	stalkie_big_nohaplotig	CDS	37479459	37479663	.	+	0	Parent=FBgn0025790.1.mrna1;Target=FBgn0025790.1 571 775 +
Chr2	stalkie_big_nohaplotig	CDS	37479730	37480397	.	+	2	Parent=FBgn0025790.1.mrna1;Target=FBgn0025790.1 776 1443 +
Chr2	stalkie_big_nohaplotig	CDS	37480967	37481116	.	+	0	Parent=FBgn0025790.1.mrna1;Target=FBgn0025790.1 1444 1593 +
Chr2	stalkie_big_nohaplotig	CDS	37481173	37481262	.	+	0	Parent=FBgn0025790.1.mrna1;Target=FBgn0025790.1 1594 1683 +
Chr2	gffcl	locus	37482607	37484816	.	-	.	ID=RLOC_00016519;geneIDs=FBgn0034938.1.path1;transcripts=FBgn0034938.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37482607	37484816	.	-	.	ID=FBgn0034938.1.mrna1;geneID=FBgn0034938.1.path1;Name=FBgn0034938.1;Dir=sensecoverage=100.0;identity=99.6;matches=1213;mismatches=5;indels=0;unknowns=0;locus=RLOC_00016519
Chr2	stalkie_big_nohaplotig	exon	37482607	37483453	99	-	.	Parent=FBgn0034938.1.mrna1;Target=FBgn0034938.1 372 1218 +
Chr2	stalkie_big_nohaplotig	exon	37483517	37483649	100	-	.	Parent=FBgn0034938.1.mrna1;Target=FBgn0034938.1 239 371 +
Chr2	stalkie_big_nohaplotig	exon	37484212	37484338	99	-	.	Parent=FBgn0034938.1.mrna1;Target=FBgn0034938.1 112 238 +
Chr2	stalkie_big_nohaplotig	exon	37484706	37484816	100	-	.	Parent=FBgn0034938.1.mrna1;Target=FBgn0034938.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	37482607	37483453	.	-	1	Parent=FBgn0034938.1.mrna1;Target=FBgn0034938.1 372 1218 +
Chr2	stalkie_big_nohaplotig	CDS	37483517	37483649	.	-	2	Parent=FBgn0034938.1.mrna1;Target=FBgn0034938.1 239 371 +
Chr2	stalkie_big_nohaplotig	CDS	37484212	37484338	.	-	0	Parent=FBgn0034938.1.mrna1;Target=FBgn0034938.1 112 238 +
Chr2	stalkie_big_nohaplotig	CDS	37484706	37484816	.	-	0	Parent=FBgn0034938.1.mrna1;Target=FBgn0034938.1 1 111 +
Chr2	stalkie_big_nohaplotig	mRNA	37577195	37579254	.	-	.	ID=FBgn0029849.1.mrna1;geneID=FBgn0029849.1.path1;Name=FBgn0029849.1;Dir=sensecoverage=100.0;identity=100.0;matches=1065;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016520
Chr2	stalkie_big_nohaplotig	exon	37577195	37577605	100	-	.	Parent=FBgn0029849.1.mrna1;Target=FBgn0029849.1 655 1065 +
Chr2	stalkie_big_nohaplotig	exon	37577663	37577848	100	-	.	Parent=FBgn0029849.1.mrna1;Target=FBgn0029849.1 469 654 +
Chr2	stalkie_big_nohaplotig	exon	37577916	37578047	100	-	.	Parent=FBgn0029849.1.mrna1;Target=FBgn0029849.1 337 468 +
Chr2	stalkie_big_nohaplotig	exon	37578114	37578330	100	-	.	Parent=FBgn0029849.1.mrna1;Target=FBgn0029849.1 120 336 +
Chr2	stalkie_big_nohaplotig	exon	37578799	37578896	100	-	.	Parent=FBgn0029849.1.mrna1;Target=FBgn0029849.1 22 119 +
Chr2	stalkie_big_nohaplotig	exon	37579234	37579254	100	-	.	Parent=FBgn0029849.1.mrna1;Target=FBgn0029849.1 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	37577195	37577605	.	-	0	Parent=FBgn0029849.1.mrna1;Target=FBgn0029849.1 655 1065 +
Chr2	stalkie_big_nohaplotig	CDS	37577663	37577848	.	-	0	Parent=FBgn0029849.1.mrna1;Target=FBgn0029849.1 469 654 +
Chr2	stalkie_big_nohaplotig	CDS	37577916	37578047	.	-	0	Parent=FBgn0029849.1.mrna1;Target=FBgn0029849.1 337 468 +
Chr2	stalkie_big_nohaplotig	CDS	37578114	37578330	.	-	1	Parent=FBgn0029849.1.mrna1;Target=FBgn0029849.1 120 336 +
Chr2	stalkie_big_nohaplotig	CDS	37578799	37578896	.	-	0	Parent=FBgn0029849.1.mrna1;Target=FBgn0029849.1 22 119 +
Chr2	stalkie_big_nohaplotig	CDS	37579234	37579254	.	-	0	Parent=FBgn0029849.1.mrna1;Target=FBgn0029849.1 1 21 +
Chr2	stalkie_big_nohaplotig	mRNA	37615657	37616244	.	+	.	ID=comp113734_c0_seq1.mrna1;geneID=comp113734_c0_seq1.path1;Name=comp113734_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=587;mismatches=1;indels=0;unknowns=0;Target=comp113734_c0_seq1 588 1 .;CDS_Target=comp113734_c0_seq1 153 1 .;locus=RLOC_00016520
Chr2	stalkie_big_nohaplotig	exon	37615657	37616244	99	+	.	Parent=comp113734_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37615657	37615809	.	+	0	Parent=comp113734_c0_seq1.mrna1
Chr2	gffcl	locus	37489774	37501188	.	+	.	ID=RLOC_00016521;geneIDs=FBgn0034975.1.path1;transcripts=FBgn0034975.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37489774	37501188	.	+	.	ID=FBgn0034975.1.mrna1;geneID=FBgn0034975.1.path1;Name=FBgn0034975.1;Dir=sensecoverage=100.0;identity=99.9;matches=7628;mismatches=7;indels=0;unknowns=0;locus=RLOC_00016521
Chr2	stalkie_big_nohaplotig	exon	37489774	37490310	100	+	.	Parent=FBgn0034975.1.mrna1;Target=FBgn0034975.1 1 537 +
Chr2	stalkie_big_nohaplotig	exon	37490405	37490733	99	+	.	Parent=FBgn0034975.1.mrna1;Target=FBgn0034975.1 538 866 +
Chr2	stalkie_big_nohaplotig	exon	37490794	37490874	98	+	.	Parent=FBgn0034975.1.mrna1;Target=FBgn0034975.1 867 947 +
Chr2	stalkie_big_nohaplotig	exon	37490975	37492176	99	+	.	Parent=FBgn0034975.1.mrna1;Target=FBgn0034975.1 948 2149 +
Chr2	stalkie_big_nohaplotig	exon	37492408	37492636	99	+	.	Parent=FBgn0034975.1.mrna1;Target=FBgn0034975.1 2150 2378 +
Chr2	stalkie_big_nohaplotig	exon	37493433	37497438	99	+	.	Parent=FBgn0034975.1.mrna1;Target=FBgn0034975.1 2379 6384 +
Chr2	stalkie_big_nohaplotig	exon	37499938	37501188	100	+	.	Parent=FBgn0034975.1.mrna1;Target=FBgn0034975.1 6385 7635 +
Chr2	stalkie_big_nohaplotig	CDS	37489774	37490310	.	+	0	Parent=FBgn0034975.1.mrna1;Target=FBgn0034975.1 1 537 +
Chr2	stalkie_big_nohaplotig	CDS	37490405	37490733	.	+	0	Parent=FBgn0034975.1.mrna1;Target=FBgn0034975.1 538 866 +
Chr2	stalkie_big_nohaplotig	CDS	37490794	37490874	.	+	1	Parent=FBgn0034975.1.mrna1;Target=FBgn0034975.1 867 947 +
Chr2	stalkie_big_nohaplotig	CDS	37490975	37492176	.	+	1	Parent=FBgn0034975.1.mrna1;Target=FBgn0034975.1 948 2149 +
Chr2	stalkie_big_nohaplotig	CDS	37492408	37492636	.	+	2	Parent=FBgn0034975.1.mrna1;Target=FBgn0034975.1 2150 2378 +
Chr2	stalkie_big_nohaplotig	CDS	37493433	37497438	.	+	1	Parent=FBgn0034975.1.mrna1;Target=FBgn0034975.1 2379 6384 +
Chr2	stalkie_big_nohaplotig	CDS	37499938	37501188	.	+	0	Parent=FBgn0034975.1.mrna1;Target=FBgn0034975.1 6385 7635 +
Chr2	gffcl	locus	37510436	37526239	.	+	.	ID=RLOC_00016522;geneIDs=FBgn0053554.1.path1;transcripts=FBgn0053554.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37510436	37526239	.	+	.	ID=FBgn0053554.1.mrna1;geneID=FBgn0053554.1.path1;Name=FBgn0053554.1;Dir=sensecoverage=99.9;identity=99.9;matches=10323;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016522
Chr2	stalkie_big_nohaplotig	exon	37510436	37510684	100	+	.	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 1 249 +
Chr2	stalkie_big_nohaplotig	exon	37511368	37511553	100	+	.	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 250 435 +
Chr2	stalkie_big_nohaplotig	exon	37511719	37511931	100	+	.	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 436 648 +
Chr2	stalkie_big_nohaplotig	exon	37513292	37513458	100	+	.	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 649 815 +
Chr2	stalkie_big_nohaplotig	exon	37513519	37513615	100	+	.	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 816 912 +
Chr2	stalkie_big_nohaplotig	exon	37513693	37513831	100	+	.	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 913 1051 +
Chr2	stalkie_big_nohaplotig	exon	37513890	37514262	99	+	.	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 1052 1424 +
Chr2	stalkie_big_nohaplotig	exon	37514321	37514399	100	+	.	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 1425 1503 +
Chr2	stalkie_big_nohaplotig	exon	37514467	37514613	100	+	.	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 1504 1650 +
Chr2	stalkie_big_nohaplotig	exon	37514678	37514884	100	+	.	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 1651 1857 +
Chr2	stalkie_big_nohaplotig	exon	37514941	37515558	100	+	.	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 1858 2475 +
Chr2	stalkie_big_nohaplotig	exon	37515627	37517019	100	+	.	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 2476 3868 +
Chr2	stalkie_big_nohaplotig	exon	37517085	37517380	100	+	.	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 3869 4164 +
Chr2	stalkie_big_nohaplotig	exon	37518121	37519722	99	+	.	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 4165 5766 +
Chr2	stalkie_big_nohaplotig	exon	37520020	37520320	100	+	.	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 5767 6067 +
Chr2	stalkie_big_nohaplotig	exon	37520393	37520564	100	+	.	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 6068 6239 +
Chr2	stalkie_big_nohaplotig	exon	37520625	37523412	99	+	.	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 6240 9027 +
Chr2	stalkie_big_nohaplotig	exon	37523519	37524055	99	+	.	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 9028 9564 +
Chr2	stalkie_big_nohaplotig	exon	37525396	37525524	100	+	.	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 9565 9693 +
Chr2	stalkie_big_nohaplotig	exon	37525604	37526239	100	+	.	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 9694 10329 +
Chr2	stalkie_big_nohaplotig	CDS	37510436	37510684	.	+	0	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 1 249 +
Chr2	stalkie_big_nohaplotig	CDS	37511368	37511553	.	+	0	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 250 435 +
Chr2	stalkie_big_nohaplotig	CDS	37511719	37511931	.	+	0	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 436 648 +
Chr2	stalkie_big_nohaplotig	CDS	37513292	37513458	.	+	0	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 649 815 +
Chr2	stalkie_big_nohaplotig	CDS	37513519	37513615	.	+	1	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 816 912 +
Chr2	stalkie_big_nohaplotig	CDS	37513693	37513831	.	+	0	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 913 1051 +
Chr2	stalkie_big_nohaplotig	CDS	37513890	37514262	.	+	2	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 1052 1424 +
Chr2	stalkie_big_nohaplotig	CDS	37514321	37514399	.	+	1	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 1425 1503 +
Chr2	stalkie_big_nohaplotig	CDS	37514467	37514613	.	+	0	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 1504 1650 +
Chr2	stalkie_big_nohaplotig	CDS	37514678	37514884	.	+	0	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 1651 1857 +
Chr2	stalkie_big_nohaplotig	CDS	37514941	37515558	.	+	0	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 1858 2475 +
Chr2	stalkie_big_nohaplotig	CDS	37515627	37517019	.	+	0	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 2476 3868 +
Chr2	stalkie_big_nohaplotig	CDS	37517085	37517380	.	+	2	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 3869 4164 +
Chr2	stalkie_big_nohaplotig	CDS	37518121	37519722	.	+	0	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 4165 5766 +
Chr2	stalkie_big_nohaplotig	CDS	37520020	37520320	.	+	0	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 5767 6067 +
Chr2	stalkie_big_nohaplotig	CDS	37520393	37520564	.	+	2	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 6068 6239 +
Chr2	stalkie_big_nohaplotig	CDS	37520625	37523412	.	+	1	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 6240 9027 +
Chr2	stalkie_big_nohaplotig	CDS	37523519	37524055	.	+	0	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 9028 9564 +
Chr2	stalkie_big_nohaplotig	CDS	37525396	37525524	.	+	0	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 9565 9693 +
Chr2	stalkie_big_nohaplotig	CDS	37525604	37526239	.	+	0	Parent=FBgn0053554.1.mrna1;Target=FBgn0053554.1 9694 10329 +
Chr2	gffcl	locus	37528252	37530503	.	-	.	ID=RLOC_00016523;geneIDs=FBgn0015268.1.path1;transcripts=FBgn0015268.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37528252	37530503	.	-	.	ID=FBgn0015268.1.mrna1;geneID=FBgn0015268.1.path1;Name=FBgn0015268.1;Dir=sensecoverage=100.0;identity=100.0;matches=1185;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016523
Chr2	stalkie_big_nohaplotig	exon	37528252	37528473	100	-	.	Parent=FBgn0015268.1.mrna1;Target=FBgn0015268.1 964 1185 +
Chr2	stalkie_big_nohaplotig	exon	37528537	37528725	100	-	.	Parent=FBgn0015268.1.mrna1;Target=FBgn0015268.1 775 963 +
Chr2	stalkie_big_nohaplotig	exon	37528804	37528944	100	-	.	Parent=FBgn0015268.1.mrna1;Target=FBgn0015268.1 634 774 +
Chr2	stalkie_big_nohaplotig	exon	37529369	37529522	100	-	.	Parent=FBgn0015268.1.mrna1;Target=FBgn0015268.1 480 633 +
Chr2	stalkie_big_nohaplotig	exon	37529580	37529891	100	-	.	Parent=FBgn0015268.1.mrna1;Target=FBgn0015268.1 168 479 +
Chr2	stalkie_big_nohaplotig	exon	37530092	37530184	100	-	.	Parent=FBgn0015268.1.mrna1;Target=FBgn0015268.1 75 167 +
Chr2	stalkie_big_nohaplotig	exon	37530430	37530503	100	-	.	Parent=FBgn0015268.1.mrna1;Target=FBgn0015268.1 1 74 +
Chr2	stalkie_big_nohaplotig	CDS	37528252	37528473	.	-	0	Parent=FBgn0015268.1.mrna1;Target=FBgn0015268.1 964 1185 +
Chr2	stalkie_big_nohaplotig	CDS	37528537	37528725	.	-	0	Parent=FBgn0015268.1.mrna1;Target=FBgn0015268.1 775 963 +
Chr2	stalkie_big_nohaplotig	CDS	37528804	37528944	.	-	0	Parent=FBgn0015268.1.mrna1;Target=FBgn0015268.1 634 774 +
Chr2	stalkie_big_nohaplotig	CDS	37529369	37529522	.	-	1	Parent=FBgn0015268.1.mrna1;Target=FBgn0015268.1 480 633 +
Chr2	stalkie_big_nohaplotig	CDS	37529580	37529891	.	-	1	Parent=FBgn0015268.1.mrna1;Target=FBgn0015268.1 168 479 +
Chr2	stalkie_big_nohaplotig	CDS	37530092	37530184	.	-	1	Parent=FBgn0015268.1.mrna1;Target=FBgn0015268.1 75 167 +
Chr2	stalkie_big_nohaplotig	CDS	37530430	37530503	.	-	0	Parent=FBgn0015268.1.mrna1;Target=FBgn0015268.1 1 74 +
Chr2	gffcl	locus	37532754	37547288	.	-	.	ID=RLOC_00016524;geneIDs=FBgn0034939.1.path1;transcripts=FBgn0034939.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37532754	37547288	.	-	.	ID=FBgn0034939.1.mrna1;geneID=FBgn0034939.1.path1;Name=FBgn0034939.1;Dir=sensecoverage=100.0;identity=99.8;matches=1824;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016524
Chr2	stalkie_big_nohaplotig	exon	37532754	37532981	100	-	.	Parent=FBgn0034939.1.mrna1;Target=FBgn0034939.1 1600 1827 +
Chr2	stalkie_big_nohaplotig	exon	37541113	37541640	99	-	.	Parent=FBgn0034939.1.mrna1;Target=FBgn0034939.1 1072 1599 +
Chr2	stalkie_big_nohaplotig	exon	37541708	37541792	100	-	.	Parent=FBgn0034939.1.mrna1;Target=FBgn0034939.1 987 1071 +
Chr2	stalkie_big_nohaplotig	exon	37545430	37545548	100	-	.	Parent=FBgn0034939.1.mrna1;Target=FBgn0034939.1 868 986 +
Chr2	stalkie_big_nohaplotig	exon	37545611	37546369	99	-	.	Parent=FBgn0034939.1.mrna1;Target=FBgn0034939.1 109 867 +
Chr2	stalkie_big_nohaplotig	exon	37547181	37547288	100	-	.	Parent=FBgn0034939.1.mrna1;Target=FBgn0034939.1 1 108 +
Chr2	stalkie_big_nohaplotig	CDS	37532754	37532981	.	-	0	Parent=FBgn0034939.1.mrna1;Target=FBgn0034939.1 1600 1827 +
Chr2	stalkie_big_nohaplotig	CDS	37541113	37541640	.	-	0	Parent=FBgn0034939.1.mrna1;Target=FBgn0034939.1 1072 1599 +
Chr2	stalkie_big_nohaplotig	CDS	37541708	37541792	.	-	1	Parent=FBgn0034939.1.mrna1;Target=FBgn0034939.1 987 1071 +
Chr2	stalkie_big_nohaplotig	CDS	37545430	37545548	.	-	0	Parent=FBgn0034939.1.mrna1;Target=FBgn0034939.1 868 986 +
Chr2	stalkie_big_nohaplotig	CDS	37545611	37546369	.	-	0	Parent=FBgn0034939.1.mrna1;Target=FBgn0034939.1 109 867 +
Chr2	stalkie_big_nohaplotig	CDS	37547181	37547288	.	-	0	Parent=FBgn0034939.1.mrna1;Target=FBgn0034939.1 1 108 +
Chr2	gffcl	locus	37557790	37559034	.	+	.	ID=RLOC_00016525;geneIDs=comp143308_c0_seq1.path1;transcripts=comp143308_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37557790	37559034	.	+	.	ID=comp143308_c0_seq1.mrna1;geneID=comp143308_c0_seq1.path1;Name=comp143308_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.6;matches=1241;mismatches=4;indels=1;unknowns=0;Target=comp143308_c0_seq1 1246 1 .;CDS_Target=comp143308_c0_seq1 1237 1124 .;locus=RLOC_00016525
Chr2	stalkie_big_nohaplotig	exon	37557790	37559034	99	+	.	Parent=comp143308_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37558912	37559025	.	+	0	Parent=comp143308_c0_seq1.mrna1
Chr2	gffcl	locus	37560139	37566680	.	.	.	ID=RLOC_00016526;geneIDs=FBgn0263006.1.path1,comp118719_c0_seq1.path1,comp135195_c1_seq1.path2;transcripts=FBgn0263006.1.mrna1,comp118719_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37560878	37566680	.	+	.	ID=FBgn0263006.1.mrna1;geneID=FBgn0263006.1.path1;Name=FBgn0263006.1;Dir=sensecoverage=100.0;identity=100.0;matches=3066;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016526
Chr2	stalkie_big_nohaplotig	exon	37560878	37561001	100	+	.	Parent=FBgn0263006.1.mrna1;Target=FBgn0263006.1 1 124 +
Chr2	stalkie_big_nohaplotig	exon	37561058	37561158	100	+	.	Parent=FBgn0263006.1.mrna1;Target=FBgn0263006.1 125 225 +
Chr2	stalkie_big_nohaplotig	exon	37563395	37565566	100	+	.	Parent=FBgn0263006.1.mrna1;Target=FBgn0263006.1 226 2397 +
Chr2	stalkie_big_nohaplotig	exon	37565626	37565741	100	+	.	Parent=FBgn0263006.1.mrna1;Target=FBgn0263006.1 2398 2513 +
Chr2	stalkie_big_nohaplotig	exon	37565959	37566195	100	+	.	Parent=FBgn0263006.1.mrna1;Target=FBgn0263006.1 2514 2750 +
Chr2	stalkie_big_nohaplotig	exon	37566259	37566376	100	+	.	Parent=FBgn0263006.1.mrna1;Target=FBgn0263006.1 2751 2868 +
Chr2	stalkie_big_nohaplotig	exon	37566483	37566680	100	+	.	Parent=FBgn0263006.1.mrna1;Target=FBgn0263006.1 2869 3066 +
Chr2	stalkie_big_nohaplotig	CDS	37560878	37561001	.	+	0	Parent=FBgn0263006.1.mrna1;Target=FBgn0263006.1 1 124 +
Chr2	stalkie_big_nohaplotig	CDS	37561058	37561158	.	+	2	Parent=FBgn0263006.1.mrna1;Target=FBgn0263006.1 125 225 +
Chr2	stalkie_big_nohaplotig	CDS	37563395	37565566	.	+	0	Parent=FBgn0263006.1.mrna1;Target=FBgn0263006.1 226 2397 +
Chr2	stalkie_big_nohaplotig	CDS	37565626	37565741	.	+	0	Parent=FBgn0263006.1.mrna1;Target=FBgn0263006.1 2398 2513 +
Chr2	stalkie_big_nohaplotig	CDS	37565959	37566195	.	+	1	Parent=FBgn0263006.1.mrna1;Target=FBgn0263006.1 2514 2750 +
Chr2	stalkie_big_nohaplotig	CDS	37566259	37566376	.	+	1	Parent=FBgn0263006.1.mrna1;Target=FBgn0263006.1 2751 2868 +
Chr2	stalkie_big_nohaplotig	CDS	37566483	37566680	.	+	0	Parent=FBgn0263006.1.mrna1;Target=FBgn0263006.1 2869 3066 +
Chr2	stalkie_big_nohaplotig	mRNA	37565718	37566004	.	+	.	ID=comp118719_c0_seq1.mrna1;geneID=comp118719_c0_seq1.path1;Name=comp118719_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=285;mismatches=2;indels=1;unknowns=0;Target=comp118719_c0_seq1 288 1 .;CDS_Target=comp118719_c0_seq1 81 1 .;locus=RLOC_00016526
Chr2	stalkie_big_nohaplotig	exon	37565718	37566004	98	+	.	Parent=comp118719_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37565718	37565797	.	+	0	Parent=comp118719_c0_seq1.mrna1
Chr2	gffcl	locus	37562050	37562814	.	-	.	ID=RLOC_00016527;geneIDs=comp135195_c1_seq1.path1;transcripts=comp135195_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37562050	37562814	.	-	.	ID=comp135195_c1_seq1.mrna1;geneID=comp135195_c1_seq1.path1;Name=comp135195_c1_seq1;Dir=indeterminatecoverage=99.0;identity=99.9;matches=764;mismatches=1;indels=0;unknowns=0;Target=comp135195_c1_seq1 765 1 .;CDS_Target=comp135195_c1_seq1 106 2 .;locus=RLOC_00016527
Chr2	stalkie_big_nohaplotig	exon	37562050	37562814	99	-	.	Parent=comp135195_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37562709	37562813	.	-	0	Parent=comp135195_c1_seq1.mrna1
Chr2	gffcl	locus	37571882	37573726	.	-	.	ID=RLOC_00016528;geneIDs=FBgn0020764.1.path1;transcripts=FBgn0020764.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37571882	37573726	.	-	.	ID=FBgn0020764.1.mrna1;geneID=FBgn0020764.1.path1;Name=FBgn0020764.1;Dir=sensecoverage=100.0;identity=99.8;matches=1590;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016528
Chr2	stalkie_big_nohaplotig	exon	37571882	37572273	99	-	.	Parent=FBgn0020764.1.mrna1;Target=FBgn0020764.1 1202 1593 +
Chr2	stalkie_big_nohaplotig	exon	37572526	37573726	99	-	.	Parent=FBgn0020764.1.mrna1;Target=FBgn0020764.1 1 1201 +
Chr2	stalkie_big_nohaplotig	CDS	37571882	37572273	.	-	2	Parent=FBgn0020764.1.mrna1;Target=FBgn0020764.1 1202 1593 +
Chr2	stalkie_big_nohaplotig	CDS	37572526	37573726	.	-	0	Parent=FBgn0020764.1.mrna1;Target=FBgn0020764.1 1 1201 +
Chr2	gffcl	locus	37580603	37586402	.	+	.	ID=RLOC_00016529;geneIDs=FBgn0260798.1.path1;transcripts=FBgn0260798.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37580603	37586402	.	+	.	ID=FBgn0260798.1.mrna1;geneID=FBgn0260798.1.path1;Name=FBgn0260798.1;Dir=sensecoverage=100.0;identity=100.0;matches=2119;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016529
Chr2	stalkie_big_nohaplotig	exon	37580603	37580732	99	+	.	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 2 131 +
Chr2	stalkie_big_nohaplotig	exon	37581707	37581783	100	+	.	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 132 208 +
Chr2	stalkie_big_nohaplotig	exon	37581845	37581918	100	+	.	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 209 282 +
Chr2	stalkie_big_nohaplotig	exon	37582002	37582103	100	+	.	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 283 384 +
Chr2	stalkie_big_nohaplotig	exon	37582555	37582629	100	+	.	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 385 459 +
Chr2	stalkie_big_nohaplotig	exon	37583391	37583452	100	+	.	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 460 521 +
Chr2	stalkie_big_nohaplotig	exon	37583521	37583572	100	+	.	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 522 573 +
Chr2	stalkie_big_nohaplotig	exon	37583640	37583831	100	+	.	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 574 765 +
Chr2	stalkie_big_nohaplotig	exon	37583902	37584057	100	+	.	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 766 921 +
Chr2	stalkie_big_nohaplotig	exon	37584118	37584444	100	+	.	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 922 1248 +
Chr2	stalkie_big_nohaplotig	exon	37584514	37584614	100	+	.	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 1249 1349 +
Chr2	stalkie_big_nohaplotig	exon	37584667	37584885	100	+	.	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 1350 1568 +
Chr2	stalkie_big_nohaplotig	exon	37585703	37585909	100	+	.	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 1569 1775 +
Chr2	stalkie_big_nohaplotig	exon	37585985	37586147	100	+	.	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 1776 1938 +
Chr2	stalkie_big_nohaplotig	exon	37586220	37586402	100	+	.	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 1939 2121 +
Chr2	stalkie_big_nohaplotig	CDS	37580605	37580732	.	+	0	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 4 131 +
Chr2	stalkie_big_nohaplotig	CDS	37581707	37581783	.	+	1	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 132 208 +
Chr2	stalkie_big_nohaplotig	CDS	37581845	37581918	.	+	2	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 209 282 +
Chr2	stalkie_big_nohaplotig	CDS	37582002	37582103	.	+	0	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 283 384 +
Chr2	stalkie_big_nohaplotig	CDS	37582555	37582629	.	+	0	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 385 459 +
Chr2	stalkie_big_nohaplotig	CDS	37583391	37583452	.	+	0	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 460 521 +
Chr2	stalkie_big_nohaplotig	CDS	37583521	37583572	.	+	1	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 522 573 +
Chr2	stalkie_big_nohaplotig	CDS	37583640	37583831	.	+	0	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 574 765 +
Chr2	stalkie_big_nohaplotig	CDS	37583902	37584057	.	+	0	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 766 921 +
Chr2	stalkie_big_nohaplotig	CDS	37584118	37584444	.	+	0	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 922 1248 +
Chr2	stalkie_big_nohaplotig	CDS	37584514	37584614	.	+	0	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 1249 1349 +
Chr2	stalkie_big_nohaplotig	CDS	37584667	37584885	.	+	1	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 1350 1568 +
Chr2	stalkie_big_nohaplotig	CDS	37585703	37585909	.	+	1	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 1569 1775 +
Chr2	stalkie_big_nohaplotig	CDS	37585985	37586147	.	+	1	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 1776 1938 +
Chr2	stalkie_big_nohaplotig	CDS	37586220	37586402	.	+	0	Parent=FBgn0260798.1.mrna1;Target=FBgn0260798.1 1939 2121 +
Chr2	gffcl	locus	37587497	37594887	.	-	.	ID=RLOC_00016530;geneIDs=FBgn0023518.1.path1;transcripts=FBgn0023518.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37587497	37594887	.	-	.	ID=FBgn0023518.1.mrna1;geneID=FBgn0023518.1.path1;Name=FBgn0023518.1;Dir=sensecoverage=100.0;identity=100.0;matches=6327;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016530
Chr2	stalkie_big_nohaplotig	exon	37587497	37587586	100	-	.	Parent=FBgn0023518.1.mrna1;Target=FBgn0023518.1 6241 6330 +
Chr2	stalkie_big_nohaplotig	exon	37587648	37587830	100	-	.	Parent=FBgn0023518.1.mrna1;Target=FBgn0023518.1 6058 6240 +
Chr2	stalkie_big_nohaplotig	exon	37587895	37588024	100	-	.	Parent=FBgn0023518.1.mrna1;Target=FBgn0023518.1 5928 6057 +
Chr2	stalkie_big_nohaplotig	exon	37588086	37588672	100	-	.	Parent=FBgn0023518.1.mrna1;Target=FBgn0023518.1 5341 5927 +
Chr2	stalkie_big_nohaplotig	exon	37589328	37589792	100	-	.	Parent=FBgn0023518.1.mrna1;Target=FBgn0023518.1 4876 5340 +
Chr2	stalkie_big_nohaplotig	exon	37589851	37590652	100	-	.	Parent=FBgn0023518.1.mrna1;Target=FBgn0023518.1 4074 4875 +
Chr2	stalkie_big_nohaplotig	exon	37590749	37591906	99	-	.	Parent=FBgn0023518.1.mrna1;Target=FBgn0023518.1 2916 4073 +
Chr2	stalkie_big_nohaplotig	exon	37591973	37594887	99	-	.	Parent=FBgn0023518.1.mrna1;Target=FBgn0023518.1 1 2915 +
Chr2	stalkie_big_nohaplotig	CDS	37587497	37587586	.	-	0	Parent=FBgn0023518.1.mrna1;Target=FBgn0023518.1 6241 6330 +
Chr2	stalkie_big_nohaplotig	CDS	37587648	37587830	.	-	0	Parent=FBgn0023518.1.mrna1;Target=FBgn0023518.1 6058 6240 +
Chr2	stalkie_big_nohaplotig	CDS	37587895	37588024	.	-	1	Parent=FBgn0023518.1.mrna1;Target=FBgn0023518.1 5928 6057 +
Chr2	stalkie_big_nohaplotig	CDS	37588086	37588672	.	-	0	Parent=FBgn0023518.1.mrna1;Target=FBgn0023518.1 5341 5927 +
Chr2	stalkie_big_nohaplotig	CDS	37589328	37589792	.	-	0	Parent=FBgn0023518.1.mrna1;Target=FBgn0023518.1 4876 5340 +
Chr2	stalkie_big_nohaplotig	CDS	37589851	37590652	.	-	1	Parent=FBgn0023518.1.mrna1;Target=FBgn0023518.1 4074 4875 +
Chr2	stalkie_big_nohaplotig	CDS	37590749	37591906	.	-	1	Parent=FBgn0023518.1.mrna1;Target=FBgn0023518.1 2916 4073 +
Chr2	stalkie_big_nohaplotig	CDS	37591973	37594887	.	-	0	Parent=FBgn0023518.1.mrna1;Target=FBgn0023518.1 1 2915 +
Chr2	gffcl	locus	37605778	37609495	.	-	.	ID=RLOC_00016531;geneIDs=FBgn0034943.1.path1;transcripts=FBgn0034943.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37605778	37609495	.	-	.	ID=FBgn0034943.1.mrna1;geneID=FBgn0034943.1.path1;Name=FBgn0034943.1;Dir=sensecoverage=100.0;identity=99.5;matches=1269;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016531
Chr2	stalkie_big_nohaplotig	exon	37605778	37605942	100	-	.	Parent=FBgn0034943.1.mrna1;Target=FBgn0034943.1 1111 1275 +
Chr2	stalkie_big_nohaplotig	exon	37606486	37607021	99	-	.	Parent=FBgn0034943.1.mrna1;Target=FBgn0034943.1 575 1110 +
Chr2	stalkie_big_nohaplotig	exon	37607080	37607251	100	-	.	Parent=FBgn0034943.1.mrna1;Target=FBgn0034943.1 403 574 +
Chr2	stalkie_big_nohaplotig	exon	37607328	37607514	99	-	.	Parent=FBgn0034943.1.mrna1;Target=FBgn0034943.1 216 402 +
Chr2	stalkie_big_nohaplotig	exon	37609281	37609495	99	-	.	Parent=FBgn0034943.1.mrna1;Target=FBgn0034943.1 1 215 +
Chr2	stalkie_big_nohaplotig	CDS	37605778	37605942	.	-	0	Parent=FBgn0034943.1.mrna1;Target=FBgn0034943.1 1111 1275 +
Chr2	stalkie_big_nohaplotig	CDS	37606486	37607021	.	-	2	Parent=FBgn0034943.1.mrna1;Target=FBgn0034943.1 575 1110 +
Chr2	stalkie_big_nohaplotig	CDS	37607080	37607251	.	-	0	Parent=FBgn0034943.1.mrna1;Target=FBgn0034943.1 403 574 +
Chr2	stalkie_big_nohaplotig	CDS	37607328	37607514	.	-	1	Parent=FBgn0034943.1.mrna1;Target=FBgn0034943.1 216 402 +
Chr2	stalkie_big_nohaplotig	CDS	37609281	37609495	.	-	0	Parent=FBgn0034943.1.mrna1;Target=FBgn0034943.1 1 215 +
Chr2	gffcl	locus	37608391	37608728	.	-	.	ID=RLOC_00016532;geneIDs=comp147727_c0_seq1.path1;transcripts=comp147727_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37608391	37608728	.	-	.	ID=comp147727_c0_seq1.mrna1;geneID=comp147727_c0_seq1.path1;Name=comp147727_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=337;mismatches=1;indels=0;unknowns=0;Target=comp147727_c0_seq1 338 1 .;CDS_Target=comp147727_c0_seq1 198 1 .;locus=RLOC_00016532
Chr2	stalkie_big_nohaplotig	exon	37608391	37608728	99	-	.	Parent=comp147727_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37608531	37608728	.	-	0	Parent=comp147727_c0_seq1.mrna1
Chr2	gffcl	locus	37615039	37626372	.	.	.	ID=RLOC_00016533;geneIDs=FBgn0259209.path1,FBgn0014863.1.path1,comp48846_c0_seq1.path1,comp93428_c0_seq1.path1,comp117398_c0_seq1.path1,comp134792_c0_seq1.path1,comp141291_c0_seq1.path1,comp150873_c0_seq1.path1;transcripts=FBgn0014863.1.mrna1,FBgn0259209.mrna1,comp141291_c0_seq1.mrna1,comp48846_c0_seq1.mrna1,comp117398_c0_seq1.mrna1,comp150873_c0_seq1.mrna1,comp134792_c0_seq1.mrna1,comp93428_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37615039	37626372	.	+	.	ID=FBgn0014863.1.mrna1;geneID=FBgn0014863.1.path1;Name=FBgn0014863.1;Dir=sensecoverage=100.0;identity=99.9;matches=1499;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016533
Chr2	stalkie_big_nohaplotig	exon	37615039	37615180	99	+	.	Parent=FBgn0014863.1.mrna1;Target=FBgn0014863.1 1 142 +
Chr2	stalkie_big_nohaplotig	exon	37615294	37615453	100	+	.	Parent=FBgn0014863.1.mrna1;Target=FBgn0014863.1 143 302 +
Chr2	stalkie_big_nohaplotig	exon	37620544	37620673	100	+	.	Parent=FBgn0014863.1.mrna1;Target=FBgn0014863.1 303 432 +
Chr2	stalkie_big_nohaplotig	exon	37622153	37622249	100	+	.	Parent=FBgn0014863.1.mrna1;Target=FBgn0014863.1 433 529 +
Chr2	stalkie_big_nohaplotig	exon	37623592	37623676	100	+	.	Parent=FBgn0014863.1.mrna1;Target=FBgn0014863.1 530 614 +
Chr2	stalkie_big_nohaplotig	exon	37624305	37624601	100	+	.	Parent=FBgn0014863.1.mrna1;Target=FBgn0014863.1 615 911 +
Chr2	stalkie_big_nohaplotig	exon	37624665	37624985	100	+	.	Parent=FBgn0014863.1.mrna1;Target=FBgn0014863.1 912 1232 +
Chr2	stalkie_big_nohaplotig	exon	37626105	37626372	100	+	.	Parent=FBgn0014863.1.mrna1;Target=FBgn0014863.1 1233 1500 +
Chr2	stalkie_big_nohaplotig	CDS	37615039	37615180	.	+	0	Parent=FBgn0014863.1.mrna1;Target=FBgn0014863.1 1 142 +
Chr2	stalkie_big_nohaplotig	CDS	37615294	37615453	.	+	2	Parent=FBgn0014863.1.mrna1;Target=FBgn0014863.1 143 302 +
Chr2	stalkie_big_nohaplotig	CDS	37620544	37620673	.	+	1	Parent=FBgn0014863.1.mrna1;Target=FBgn0014863.1 303 432 +
Chr2	stalkie_big_nohaplotig	CDS	37622153	37622249	.	+	0	Parent=FBgn0014863.1.mrna1;Target=FBgn0014863.1 433 529 +
Chr2	stalkie_big_nohaplotig	CDS	37623592	37623676	.	+	2	Parent=FBgn0014863.1.mrna1;Target=FBgn0014863.1 530 614 +
Chr2	stalkie_big_nohaplotig	CDS	37624305	37624601	.	+	1	Parent=FBgn0014863.1.mrna1;Target=FBgn0014863.1 615 911 +
Chr2	stalkie_big_nohaplotig	CDS	37624665	37624985	.	+	1	Parent=FBgn0014863.1.mrna1;Target=FBgn0014863.1 912 1232 +
Chr2	stalkie_big_nohaplotig	CDS	37626105	37626372	.	+	1	Parent=FBgn0014863.1.mrna1;Target=FBgn0014863.1 1233 1500 +
Chr2	stalkie_big_nohaplotig	mRNA	37620650	37624326	.	+	.	ID=FBgn0259209.mrna1;geneID=FBgn0259209.path1;Name=FBgn0259209;Dir=sensecoverage=100.0;identity=100.0;matches=240;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016533
Chr2	stalkie_big_nohaplotig	exon	37620650	37620673	100	+	.	Parent=FBgn0259209.mrna1;Target=FBgn0259209 1 24 +
Chr2	stalkie_big_nohaplotig	exon	37621584	37621680	100	+	.	Parent=FBgn0259209.mrna1;Target=FBgn0259209 25 121 +
Chr2	stalkie_big_nohaplotig	exon	37623823	37623919	100	+	.	Parent=FBgn0259209.mrna1;Target=FBgn0259209 122 218 +
Chr2	stalkie_big_nohaplotig	exon	37624305	37624326	100	+	.	Parent=FBgn0259209.mrna1;Target=FBgn0259209 219 240 +
Chr2	stalkie_big_nohaplotig	CDS	37620650	37620673	.	+	0	Parent=FBgn0259209.mrna1;Target=FBgn0259209 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	37621584	37621680	.	+	0	Parent=FBgn0259209.mrna1;Target=FBgn0259209 25 121 +
Chr2	stalkie_big_nohaplotig	CDS	37623823	37623919	.	+	2	Parent=FBgn0259209.mrna1;Target=FBgn0259209 122 218 +
Chr2	stalkie_big_nohaplotig	CDS	37624305	37624326	.	+	1	Parent=FBgn0259209.mrna1;Target=FBgn0259209 219 240 +
Chr2	stalkie_big_nohaplotig	mRNA	37621274	37621607	.	+	.	ID=comp141291_c0_seq1.mrna1;geneID=comp141291_c0_seq1.path1;Name=comp141291_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=330;mismatches=4;indels=1;unknowns=0;Target=comp141291_c0_seq1 335 1 .;CDS_Target=comp141291_c0_seq1 222 61 .;locus=RLOC_00016533
Chr2	stalkie_big_nohaplotig	exon	37621274	37621607	98	+	.	Parent=comp141291_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37621334	37621494	.	+	0	Parent=comp141291_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37621860	37622176	.	+	.	ID=comp48846_c0_seq1.mrna1;geneID=comp48846_c0_seq1.path1;Name=comp48846_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=317;mismatches=0;indels=0;unknowns=0;Target=comp48846_c0_seq1 317 1 .;CDS_Target=comp48846_c0_seq1 221 141 .;locus=RLOC_00016533
Chr2	stalkie_big_nohaplotig	exon	37621860	37622176	100	+	.	Parent=comp48846_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37622000	37622080	.	+	0	Parent=comp48846_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37622227	37622680	.	+	.	ID=comp117398_c0_seq1.mrna1;geneID=comp117398_c0_seq1.path1;Name=comp117398_c0_seq1;Dir=indeterminatecoverage=96.6;identity=99.3;matches=451;mismatches=3;indels=0;unknowns=0;Target=comp117398_c0_seq1 454 1 .;CDS_Target=comp117398_c0_seq1 99 1 .;locus=RLOC_00016533
Chr2	stalkie_big_nohaplotig	exon	37622227	37622680	99	+	.	Parent=comp117398_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37622227	37622325	.	+	0	Parent=comp117398_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37622692	37623636	.	-	.	ID=comp150873_c0_seq1.mrna1;geneID=comp150873_c0_seq1.path1;Name=comp150873_c0_seq1;Dir=indeterminatecoverage=96.2;identity=99.0;matches=937;mismatches=8;indels=1;unknowns=0;Target=comp150873_c0_seq1 946 1 .;CDS_Target=comp150873_c0_seq1 100 2 .;locus=RLOC_00016533
Chr2	stalkie_big_nohaplotig	exon	37622692	37623636	99	-	.	Parent=comp150873_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37623537	37623635	.	-	0	Parent=comp150873_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37623896	37624142	.	+	.	ID=comp134792_c0_seq1.mrna1;geneID=comp134792_c0_seq1.path1;Name=comp134792_c0_seq1;Dir=indeterminatecoverage=48.0;identity=99.6;matches=246;mismatches=1;indels=0;unknowns=0;Target=comp134792_c0_seq1 247 1 .;CDS_Target=comp134792_c0_seq1 91 2 .;locus=RLOC_00016533
Chr2	stalkie_big_nohaplotig	exon	37623896	37624142	99	+	.	Parent=comp134792_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37623897	37623986	.	+	0	Parent=comp134792_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37625814	37626127	.	+	.	ID=comp93428_c0_seq1.mrna1;geneID=comp93428_c0_seq1.path1;Name=comp93428_c0_seq1;Dir=indeterminatecoverage=96.0;identity=99.4;matches=312;mismatches=2;indels=0;unknowns=0;Target=comp93428_c0_seq1 327 14 .;CDS_Target=comp93428_c0_seq1 76 14 .;locus=RLOC_00016533
Chr2	stalkie_big_nohaplotig	exon	37625814	37626127	99	+	.	Parent=comp93428_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37625814	37625876	.	+	0	Parent=comp93428_c0_seq1.mrna1
Chr2	gffcl	locus	37616936	37617247	.	-	.	ID=RLOC_00016534;geneIDs=comp121783_c0_seq1.path1;transcripts=comp121783_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37616936	37617247	.	-	.	ID=comp121783_c0_seq1.mrna1;geneID=comp121783_c0_seq1.path1;Name=comp121783_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.4;matches=310;mismatches=2;indels=0;unknowns=0;Target=comp121783_c0_seq1 313 2 .;CDS_Target=comp121783_c0_seq1 209 51 .;locus=RLOC_00016534
Chr2	stalkie_big_nohaplotig	exon	37616936	37617247	99	-	.	Parent=comp121783_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37617040	37617198	.	-	0	Parent=comp121783_c0_seq1.mrna1
Chr2	gffcl	locus	37625360	37625803	.	+	.	ID=RLOC_00016535;geneIDs=comp143301_c0_seq1.path1;transcripts=comp143301_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37625360	37625803	.	+	.	ID=comp143301_c0_seq1.mrna1;geneID=comp143301_c0_seq1.path1;Name=comp143301_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=443;mismatches=1;indels=0;unknowns=0;Target=comp143301_c0_seq1 444 1 .;CDS_Target=comp143301_c0_seq1 77 3 .;locus=RLOC_00016535
Chr2	stalkie_big_nohaplotig	exon	37625360	37625803	99	+	.	Parent=comp143301_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37625362	37625436	.	+	0	Parent=comp143301_c0_seq1.mrna1
Chr2	gffcl	locus	37640299	37658004	.	-	.	ID=RLOC_00016536;geneIDs=FBgn0086129.1.path1;transcripts=FBgn0086129.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37640299	37658004	.	-	.	ID=FBgn0086129.1.mrna1;geneID=FBgn0086129.1.path1;Name=FBgn0086129.1;Dir=sensecoverage=100.0;identity=100.0;matches=4253;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016536
Chr2	stalkie_big_nohaplotig	exon	37640299	37642234	99	-	.	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 2319 4254 +
Chr2	stalkie_big_nohaplotig	exon	37649442	37649558	100	-	.	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 2202 2318 +
Chr2	stalkie_big_nohaplotig	exon	37650689	37650766	100	-	.	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 2124 2201 +
Chr2	stalkie_big_nohaplotig	exon	37650825	37650917	100	-	.	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 2031 2123 +
Chr2	stalkie_big_nohaplotig	exon	37650976	37651251	100	-	.	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 1755 2030 +
Chr2	stalkie_big_nohaplotig	exon	37651314	37651460	100	-	.	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 1608 1754 +
Chr2	stalkie_big_nohaplotig	exon	37655177	37655535	100	-	.	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 1249 1607 +
Chr2	stalkie_big_nohaplotig	exon	37656171	37656499	100	-	.	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 920 1248 +
Chr2	stalkie_big_nohaplotig	exon	37656562	37656720	100	-	.	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 761 919 +
Chr2	stalkie_big_nohaplotig	exon	37656778	37656917	100	-	.	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 621 760 +
Chr2	stalkie_big_nohaplotig	exon	37656982	37657164	100	-	.	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 438 620 +
Chr2	stalkie_big_nohaplotig	exon	37657517	37657748	100	-	.	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 206 437 +
Chr2	stalkie_big_nohaplotig	exon	37657800	37658004	100	-	.	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 1 205 +
Chr2	stalkie_big_nohaplotig	CDS	37640299	37642234	.	-	1	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 2319 4254 +
Chr2	stalkie_big_nohaplotig	CDS	37649442	37649558	.	-	1	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 2202 2318 +
Chr2	stalkie_big_nohaplotig	CDS	37650689	37650766	.	-	1	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 2124 2201 +
Chr2	stalkie_big_nohaplotig	CDS	37650825	37650917	.	-	1	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 2031 2123 +
Chr2	stalkie_big_nohaplotig	CDS	37650976	37651251	.	-	1	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 1755 2030 +
Chr2	stalkie_big_nohaplotig	CDS	37651314	37651460	.	-	1	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 1608 1754 +
Chr2	stalkie_big_nohaplotig	CDS	37655177	37655535	.	-	0	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 1249 1607 +
Chr2	stalkie_big_nohaplotig	CDS	37656171	37656499	.	-	2	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 920 1248 +
Chr2	stalkie_big_nohaplotig	CDS	37656562	37656720	.	-	2	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 761 919 +
Chr2	stalkie_big_nohaplotig	CDS	37656778	37656917	.	-	1	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 621 760 +
Chr2	stalkie_big_nohaplotig	CDS	37656982	37657164	.	-	1	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 438 620 +
Chr2	stalkie_big_nohaplotig	CDS	37657517	37657748	.	-	2	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 206 437 +
Chr2	stalkie_big_nohaplotig	CDS	37657800	37658004	.	-	0	Parent=FBgn0086129.1.mrna1;Target=FBgn0086129.1 1 205 +
Chr2	gffcl	locus	37660089	37661286	.	-	.	ID=RLOC_00016537;geneIDs=FBgn0034925.1.path1;transcripts=FBgn0034925.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37660089	37661286	.	-	.	ID=FBgn0034925.1.mrna1;geneID=FBgn0034925.1.path1;Name=FBgn0034925.1;Dir=sensecoverage=100.0;identity=99.4;matches=972;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016537
Chr2	stalkie_big_nohaplotig	exon	37660089	37660637	99	-	.	Parent=FBgn0034925.1.mrna1;Target=FBgn0034925.1 430 978 +
Chr2	stalkie_big_nohaplotig	exon	37660729	37661010	98	-	.	Parent=FBgn0034925.1.mrna1;Target=FBgn0034925.1 148 429 +
Chr2	stalkie_big_nohaplotig	exon	37661140	37661286	99	-	.	Parent=FBgn0034925.1.mrna1;Target=FBgn0034925.1 1 147 +
Chr2	stalkie_big_nohaplotig	CDS	37660089	37660637	.	-	0	Parent=FBgn0034925.1.mrna1;Target=FBgn0034925.1 430 978 +
Chr2	stalkie_big_nohaplotig	CDS	37660729	37661010	.	-	0	Parent=FBgn0034925.1.mrna1;Target=FBgn0034925.1 148 429 +
Chr2	stalkie_big_nohaplotig	CDS	37661140	37661286	.	-	0	Parent=FBgn0034925.1.mrna1;Target=FBgn0034925.1 1 147 +
Chr2	gffcl	locus	37663632	37671749	.	+	.	ID=RLOC_00016538;geneIDs=FBgn0001123.1.path1,comp150342_c1_seq1.path1;transcripts=comp150342_c1_seq1.mrna1,FBgn0001123.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37663632	37671749	.	+	.	ID=comp150342_c1_seq1.mrna1;geneID=comp150342_c1_seq1.path1;Name=comp150342_c1_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=3424;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016538
Chr2	stalkie_big_nohaplotig	exon	37663632	37663771	100	+	.	Parent=comp150342_c1_seq1.mrna1;Target=comp150342_c1_seq1 3286 3425 -
Chr2	stalkie_big_nohaplotig	exon	37665245	37665726	99	+	.	Parent=comp150342_c1_seq1.mrna1;Target=comp150342_c1_seq1 2804 3285 -
Chr2	stalkie_big_nohaplotig	exon	37665794	37665890	100	+	.	Parent=comp150342_c1_seq1.mrna1;Target=comp150342_c1_seq1 2707 2803 -
Chr2	stalkie_big_nohaplotig	exon	37667656	37667776	100	+	.	Parent=comp150342_c1_seq1.mrna1;Target=comp150342_c1_seq1 2586 2706 -
Chr2	stalkie_big_nohaplotig	exon	37668219	37668347	100	+	.	Parent=comp150342_c1_seq1.mrna1;Target=comp150342_c1_seq1 2457 2585 -
Chr2	stalkie_big_nohaplotig	exon	37668415	37668594	100	+	.	Parent=comp150342_c1_seq1.mrna1;Target=comp150342_c1_seq1 2277 2456 -
Chr2	stalkie_big_nohaplotig	exon	37668881	37669005	100	+	.	Parent=comp150342_c1_seq1.mrna1;Target=comp150342_c1_seq1 2152 2276 -
Chr2	stalkie_big_nohaplotig	exon	37669599	37671749	100	+	.	Parent=comp150342_c1_seq1.mrna1;Target=comp150342_c1_seq1 1 2151 -
Chr2	stalkie_big_nohaplotig	CDS	37665451	37665726	.	+	0	Parent=comp150342_c1_seq1.mrna1;Target=comp150342_c1_seq1 2804 3079 .
Chr2	stalkie_big_nohaplotig	CDS	37665794	37665890	.	+	0	Parent=comp150342_c1_seq1.mrna1;Target=comp150342_c1_seq1 2707 2803 .
Chr2	stalkie_big_nohaplotig	CDS	37667656	37667776	.	+	2	Parent=comp150342_c1_seq1.mrna1;Target=comp150342_c1_seq1 2586 2706 .
Chr2	stalkie_big_nohaplotig	CDS	37668219	37668347	.	+	1	Parent=comp150342_c1_seq1.mrna1;Target=comp150342_c1_seq1 2457 2585 .
Chr2	stalkie_big_nohaplotig	CDS	37668415	37668594	.	+	1	Parent=comp150342_c1_seq1.mrna1;Target=comp150342_c1_seq1 2277 2456 .
Chr2	stalkie_big_nohaplotig	CDS	37668881	37669005	.	+	1	Parent=comp150342_c1_seq1.mrna1;Target=comp150342_c1_seq1 2152 2276 .
Chr2	stalkie_big_nohaplotig	CDS	37669599	37669699	.	+	2	Parent=comp150342_c1_seq1.mrna1;Target=comp150342_c1_seq1 2051 2151 .
Chr2	stalkie_big_nohaplotig	mRNA	37665352	37670838	.	+	.	ID=FBgn0001123.1.mrna1;geneID=FBgn0001123.1.path1;Name=FBgn0001123.1;Dir=sensecoverage=100.0;identity=99.9;matches=1244;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016538
Chr2	stalkie_big_nohaplotig	exon	37665352	37665726	99	+	.	Parent=FBgn0001123.1.mrna1;Target=FBgn0001123.1 1 375 +
Chr2	stalkie_big_nohaplotig	exon	37665794	37665890	100	+	.	Parent=FBgn0001123.1.mrna1;Target=FBgn0001123.1 376 472 +
Chr2	stalkie_big_nohaplotig	exon	37667656	37667776	100	+	.	Parent=FBgn0001123.1.mrna1;Target=FBgn0001123.1 473 593 +
Chr2	stalkie_big_nohaplotig	exon	37668219	37668347	100	+	.	Parent=FBgn0001123.1.mrna1;Target=FBgn0001123.1 594 722 +
Chr2	stalkie_big_nohaplotig	exon	37668415	37668594	100	+	.	Parent=FBgn0001123.1.mrna1;Target=FBgn0001123.1 723 902 +
Chr2	stalkie_big_nohaplotig	exon	37668881	37669005	100	+	.	Parent=FBgn0001123.1.mrna1;Target=FBgn0001123.1 903 1027 +
Chr2	stalkie_big_nohaplotig	exon	37669599	37669672	100	+	.	Parent=FBgn0001123.1.mrna1;Target=FBgn0001123.1 1028 1101 +
Chr2	stalkie_big_nohaplotig	exon	37670695	37670838	100	+	.	Parent=FBgn0001123.1.mrna1;Target=FBgn0001123.1 1102 1245 +
Chr2	stalkie_big_nohaplotig	CDS	37665352	37665726	.	+	0	Parent=FBgn0001123.1.mrna1;Target=FBgn0001123.1 1 375 +
Chr2	stalkie_big_nohaplotig	CDS	37665794	37665890	.	+	0	Parent=FBgn0001123.1.mrna1;Target=FBgn0001123.1 376 472 +
Chr2	stalkie_big_nohaplotig	CDS	37667656	37667776	.	+	2	Parent=FBgn0001123.1.mrna1;Target=FBgn0001123.1 473 593 +
Chr2	stalkie_big_nohaplotig	CDS	37668219	37668347	.	+	1	Parent=FBgn0001123.1.mrna1;Target=FBgn0001123.1 594 722 +
Chr2	stalkie_big_nohaplotig	CDS	37668415	37668594	.	+	1	Parent=FBgn0001123.1.mrna1;Target=FBgn0001123.1 723 902 +
Chr2	stalkie_big_nohaplotig	CDS	37668881	37669005	.	+	1	Parent=FBgn0001123.1.mrna1;Target=FBgn0001123.1 903 1027 +
Chr2	stalkie_big_nohaplotig	CDS	37669599	37669672	.	+	2	Parent=FBgn0001123.1.mrna1;Target=FBgn0001123.1 1028 1101 +
Chr2	stalkie_big_nohaplotig	CDS	37670695	37670838	.	+	0	Parent=FBgn0001123.1.mrna1;Target=FBgn0001123.1 1102 1245 +
Chr2	gffcl	locus	37676747	37677872	.	-	.	ID=RLOC_00016539;geneIDs=comp101231_c0_seq1.path1,comp137725_c0_seq1.path1;transcripts=comp101231_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37677281	37677872	.	-	.	ID=comp101231_c0_seq1.mrna1;geneID=comp101231_c0_seq1.path1;Name=comp101231_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=591;mismatches=1;indels=0;unknowns=0;Target=comp101231_c0_seq1 592 1 .;CDS_Target=comp101231_c0_seq1 343 215 .;locus=RLOC_00016539
Chr2	stalkie_big_nohaplotig	exon	37677281	37677872	99	-	.	Parent=comp101231_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37677530	37677658	.	-	0	Parent=comp101231_c0_seq1.mrna1
Chr2	gffcl	locus	37678473	37682713	.	+	.	ID=RLOC_00016540;geneIDs=comp153182_c0_seq1.path1;transcripts=comp153182_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37678473	37682713	.	+	.	ID=comp153182_c0_seq1.mrna1;geneID=comp153182_c0_seq1.path1;Name=comp153182_c0_seq1;Dir=sensecoverage=99.6;identity=99.4;matches=838;mismatches=4;indels=1;unknowns=0;locus=RLOC_00016540
Chr2	stalkie_big_nohaplotig	exon	37678473	37678950	98	+	.	Parent=comp153182_c0_seq1.mrna1;Target=comp153182_c0_seq1 4 482 +
Chr2	stalkie_big_nohaplotig	exon	37679189	37679234	100	+	.	Parent=comp153182_c0_seq1.mrna1;Target=comp153182_c0_seq1 483 528 +
Chr2	stalkie_big_nohaplotig	exon	37680406	37680445	100	+	.	Parent=comp153182_c0_seq1.mrna1;Target=comp153182_c0_seq1 529 568 +
Chr2	stalkie_big_nohaplotig	exon	37682314	37682402	100	+	.	Parent=comp153182_c0_seq1.mrna1;Target=comp153182_c0_seq1 569 657 +
Chr2	stalkie_big_nohaplotig	exon	37682525	37682713	100	+	.	Parent=comp153182_c0_seq1.mrna1;Target=comp153182_c0_seq1 658 846 +
Chr2	stalkie_big_nohaplotig	CDS	37678885	37678950	.	+	0	Parent=comp153182_c0_seq1.mrna1;Target=comp153182_c0_seq1 417 482 +
Chr2	stalkie_big_nohaplotig	CDS	37679189	37679234	.	+	0	Parent=comp153182_c0_seq1.mrna1;Target=comp153182_c0_seq1 483 528 +
Chr2	stalkie_big_nohaplotig	CDS	37680406	37680445	.	+	2	Parent=comp153182_c0_seq1.mrna1;Target=comp153182_c0_seq1 529 568 +
Chr2	stalkie_big_nohaplotig	CDS	37682314	37682402	.	+	1	Parent=comp153182_c0_seq1.mrna1;Target=comp153182_c0_seq1 569 657 +
Chr2	stalkie_big_nohaplotig	CDS	37682525	37682631	.	+	2	Parent=comp153182_c0_seq1.mrna1;Target=comp153182_c0_seq1 658 764 +
Chr2	gffcl	locus	37684532	37689399	.	-	.	ID=RLOC_00016541;geneIDs=FBgn0034920.1.path1,comp96596_c0_seq1.path1;transcripts=FBgn0034920.1.mrna1,comp96596_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37684532	37689399	.	-	.	ID=FBgn0034920.1.mrna1;geneID=FBgn0034920.1.path1;Name=FBgn0034920.1;Dir=sensecoverage=100.0;identity=100.0;matches=849;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016541
Chr2	stalkie_big_nohaplotig	exon	37684532	37684772	100	-	.	Parent=FBgn0034920.1.mrna1;Target=FBgn0034920.1 609 849 +
Chr2	stalkie_big_nohaplotig	exon	37684838	37685115	100	-	.	Parent=FBgn0034920.1.mrna1;Target=FBgn0034920.1 331 608 +
Chr2	stalkie_big_nohaplotig	exon	37685312	37685508	100	-	.	Parent=FBgn0034920.1.mrna1;Target=FBgn0034920.1 134 330 +
Chr2	stalkie_big_nohaplotig	exon	37689267	37689399	100	-	.	Parent=FBgn0034920.1.mrna1;Target=FBgn0034920.1 1 133 +
Chr2	stalkie_big_nohaplotig	CDS	37684532	37684772	.	-	1	Parent=FBgn0034920.1.mrna1;Target=FBgn0034920.1 609 849 +
Chr2	stalkie_big_nohaplotig	CDS	37684838	37685115	.	-	0	Parent=FBgn0034920.1.mrna1;Target=FBgn0034920.1 331 608 +
Chr2	stalkie_big_nohaplotig	CDS	37685312	37685508	.	-	2	Parent=FBgn0034920.1.mrna1;Target=FBgn0034920.1 134 330 +
Chr2	stalkie_big_nohaplotig	CDS	37689267	37689399	.	-	0	Parent=FBgn0034920.1.mrna1;Target=FBgn0034920.1 1 133 +
Chr2	stalkie_big_nohaplotig	mRNA	37685487	37685988	.	-	.	ID=comp96596_c0_seq1.mrna1;geneID=comp96596_c0_seq1.path1;Name=comp96596_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=502;mismatches=0;indels=0;unknowns=0;Target=comp96596_c0_seq1 502 1 .;CDS_Target=comp96596_c0_seq1 70 2 .;locus=RLOC_00016541
Chr2	stalkie_big_nohaplotig	exon	37685487	37685988	100	-	.	Parent=comp96596_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37685919	37685987	.	-	0	Parent=comp96596_c0_seq1.mrna1
Chr2	gffcl	locus	37687516	37688724	.	-	.	ID=RLOC_00016542;geneIDs=comp150776_c0_seq1.path1;transcripts=comp150776_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37687516	37688724	.	-	.	ID=comp150776_c0_seq1.mrna1;geneID=comp150776_c0_seq1.path1;Name=comp150776_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1207;mismatches=2;indels=0;unknowns=0;Target=comp150776_c0_seq1 1209 1 .;CDS_Target=comp150776_c0_seq1 420 241 .;locus=RLOC_00016542
Chr2	stalkie_big_nohaplotig	exon	37687516	37688724	99	-	.	Parent=comp150776_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37688305	37688484	.	-	0	Parent=comp150776_c0_seq1.mrna1
Chr2	gffcl	locus	37692512	37701129	.	+	.	ID=RLOC_00016543;geneIDs=FBgn0029105.1.path1,comp157237_c0_seq1.path1;transcripts=comp157237_c0_seq1.mrna1,FBgn0029105.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37692512	37699818	.	+	.	ID=comp157237_c0_seq1.mrna1;geneID=comp157237_c0_seq1.path1;Name=comp157237_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=2430;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016543
Chr2	stalkie_big_nohaplotig	exon	37692512	37692654	99	+	.	Parent=comp157237_c0_seq1.mrna1;Target=comp157237_c0_seq1 2292 2434 -
Chr2	stalkie_big_nohaplotig	exon	37695297	37695409	100	+	.	Parent=comp157237_c0_seq1.mrna1;Target=comp157237_c0_seq1 2179 2291 -
Chr2	stalkie_big_nohaplotig	exon	37695489	37695669	100	+	.	Parent=comp157237_c0_seq1.mrna1;Target=comp157237_c0_seq1 1998 2178 -
Chr2	stalkie_big_nohaplotig	exon	37695775	37697255	99	+	.	Parent=comp157237_c0_seq1.mrna1;Target=comp157237_c0_seq1 517 1997 -
Chr2	stalkie_big_nohaplotig	exon	37698318	37698629	100	+	.	Parent=comp157237_c0_seq1.mrna1;Target=comp157237_c0_seq1 205 516 -
Chr2	stalkie_big_nohaplotig	exon	37699615	37699818	100	+	.	Parent=comp157237_c0_seq1.mrna1;Target=comp157237_c0_seq1 1 204 -
Chr2	stalkie_big_nohaplotig	CDS	37695374	37695409	.	+	0	Parent=comp157237_c0_seq1.mrna1;Target=comp157237_c0_seq1 2179 2214 .
Chr2	stalkie_big_nohaplotig	CDS	37695489	37695669	.	+	0	Parent=comp157237_c0_seq1.mrna1;Target=comp157237_c0_seq1 1998 2178 .
Chr2	stalkie_big_nohaplotig	CDS	37695775	37697255	.	+	2	Parent=comp157237_c0_seq1.mrna1;Target=comp157237_c0_seq1 517 1997 .
Chr2	stalkie_big_nohaplotig	CDS	37698318	37698629	.	+	0	Parent=comp157237_c0_seq1.mrna1;Target=comp157237_c0_seq1 205 516 .
Chr2	stalkie_big_nohaplotig	CDS	37699615	37699818	.	+	0	Parent=comp157237_c0_seq1.mrna1;Target=comp157237_c0_seq1 1 204 .
Chr2	stalkie_big_nohaplotig	mRNA	37695374	37701129	.	+	.	ID=FBgn0029105.1.mrna1;geneID=FBgn0029105.1.path1;Name=FBgn0029105.1;Dir=sensecoverage=100.0;identity=99.9;matches=2337;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016543
Chr2	stalkie_big_nohaplotig	exon	37695374	37695409	100	+	.	Parent=FBgn0029105.1.mrna1;Target=FBgn0029105.1 1 36 +
Chr2	stalkie_big_nohaplotig	exon	37695489	37695669	100	+	.	Parent=FBgn0029105.1.mrna1;Target=FBgn0029105.1 37 217 +
Chr2	stalkie_big_nohaplotig	exon	37695775	37697255	99	+	.	Parent=FBgn0029105.1.mrna1;Target=FBgn0029105.1 218 1698 +
Chr2	stalkie_big_nohaplotig	exon	37698318	37698629	100	+	.	Parent=FBgn0029105.1.mrna1;Target=FBgn0029105.1 1699 2010 +
Chr2	stalkie_big_nohaplotig	exon	37699615	37699821	100	+	.	Parent=FBgn0029105.1.mrna1;Target=FBgn0029105.1 2011 2217 +
Chr2	stalkie_big_nohaplotig	exon	37701007	37701129	100	+	.	Parent=FBgn0029105.1.mrna1;Target=FBgn0029105.1 2218 2340 +
Chr2	stalkie_big_nohaplotig	CDS	37695374	37695409	.	+	0	Parent=FBgn0029105.1.mrna1;Target=FBgn0029105.1 1 36 +
Chr2	stalkie_big_nohaplotig	CDS	37695489	37695669	.	+	0	Parent=FBgn0029105.1.mrna1;Target=FBgn0029105.1 37 217 +
Chr2	stalkie_big_nohaplotig	CDS	37695775	37697255	.	+	2	Parent=FBgn0029105.1.mrna1;Target=FBgn0029105.1 218 1698 +
Chr2	stalkie_big_nohaplotig	CDS	37698318	37698629	.	+	0	Parent=FBgn0029105.1.mrna1;Target=FBgn0029105.1 1699 2010 +
Chr2	stalkie_big_nohaplotig	CDS	37699615	37699821	.	+	0	Parent=FBgn0029105.1.mrna1;Target=FBgn0029105.1 2011 2217 +
Chr2	stalkie_big_nohaplotig	CDS	37701007	37701129	.	+	0	Parent=FBgn0029105.1.mrna1;Target=FBgn0029105.1 2218 2340 +
Chr2	gffcl	locus	37702986	37703851	.	+	.	ID=RLOC_00016544;geneIDs=FBgn0034940.2.path1;transcripts=FBgn0034940.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37702986	37703851	.	+	.	ID=FBgn0034940.2.mrna1;geneID=FBgn0034940.2.path1;Name=FBgn0034940.2;Dir=sensecoverage=100.0;identity=100.0;matches=813;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016544
Chr2	stalkie_big_nohaplotig	exon	37702986	37703022	100	+	.	Parent=FBgn0034940.2.mrna1;Target=FBgn0034940.2 1 37 +
Chr2	stalkie_big_nohaplotig	exon	37703076	37703851	100	+	.	Parent=FBgn0034940.2.mrna1;Target=FBgn0034940.2 38 813 +
Chr2	stalkie_big_nohaplotig	CDS	37702986	37703022	.	+	0	Parent=FBgn0034940.2.mrna1;Target=FBgn0034940.2 1 37 +
Chr2	stalkie_big_nohaplotig	CDS	37703076	37703851	.	+	2	Parent=FBgn0034940.2.mrna1;Target=FBgn0034940.2 38 813 +
Chr2	gffcl	locus	37706008	37706974	.	+	.	ID=RLOC_00016545;geneIDs=FBgn0015621.1.path1;transcripts=FBgn0015621.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37706008	37706974	.	+	.	ID=FBgn0015621.1.mrna1;geneID=FBgn0015621.1.path1;Name=FBgn0015621.1;Dir=sensecoverage=100.0;identity=99.9;matches=896;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016545
Chr2	stalkie_big_nohaplotig	exon	37706008	37706125	100	+	.	Parent=FBgn0015621.1.mrna1;Target=FBgn0015621.1 1 118 +
Chr2	stalkie_big_nohaplotig	exon	37706196	37706974	99	+	.	Parent=FBgn0015621.1.mrna1;Target=FBgn0015621.1 119 897 +
Chr2	stalkie_big_nohaplotig	CDS	37706008	37706125	.	+	0	Parent=FBgn0015621.1.mrna1;Target=FBgn0015621.1 1 118 +
Chr2	stalkie_big_nohaplotig	CDS	37706196	37706974	.	+	2	Parent=FBgn0015621.1.mrna1;Target=FBgn0015621.1 119 897 +
Chr2	gffcl	locus	37720352	37728795	.	+	.	ID=RLOC_00016546;geneIDs=FBgn0035089.1.path1;transcripts=FBgn0035089.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37720352	37728795	.	+	.	ID=FBgn0035089.1.mrna1;geneID=FBgn0035089.1.path1;Name=FBgn0035089.1;Dir=sensecoverage=100.0;identity=99.3;matches=438;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016546
Chr2	stalkie_big_nohaplotig	exon	37720352	37720431	100	+	.	Parent=FBgn0035089.1.mrna1;Target=FBgn0035089.1 1 80 +
Chr2	stalkie_big_nohaplotig	exon	37728357	37728544	98	+	.	Parent=FBgn0035089.1.mrna1;Target=FBgn0035089.1 81 268 +
Chr2	stalkie_big_nohaplotig	exon	37728623	37728795	99	+	.	Parent=FBgn0035089.1.mrna1;Target=FBgn0035089.1 269 441 +
Chr2	stalkie_big_nohaplotig	CDS	37720352	37720431	.	+	0	Parent=FBgn0035089.1.mrna1;Target=FBgn0035089.1 1 80 +
Chr2	stalkie_big_nohaplotig	CDS	37728357	37728544	.	+	1	Parent=FBgn0035089.1.mrna1;Target=FBgn0035089.1 81 268 +
Chr2	stalkie_big_nohaplotig	CDS	37728623	37728795	.	+	2	Parent=FBgn0035089.1.mrna1;Target=FBgn0035089.1 269 441 +
Chr2	gffcl	locus	37725486	37726750	.	-	.	ID=RLOC_00016547;geneIDs=comp154754_c0_seq1.path1;transcripts=comp154754_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37725486	37726750	.	-	.	ID=comp154754_c0_seq1.mrna1;geneID=comp154754_c0_seq1.path1;Name=comp154754_c0_seq1;Dir=sensecoverage=97.9;identity=96.5;matches=1132;mismatches=19;indels=22;unknowns=0;Target=comp154754_c0_seq1 342 539 +;locus=RLOC_00016547
Chr2	stalkie_big_nohaplotig	exon	37725486	37725752	98	-	.	Parent=comp154754_c0_seq1.mrna1;Target=comp154754_c0_seq1 910 1176 +
Chr2	stalkie_big_nohaplotig	exon	37725845	37726750	95	-	.	Parent=comp154754_c0_seq1.mrna1;Target=comp154754_c0_seq1 26 909 +
Chr2	stalkie_big_nohaplotig	CDS	37726215	37726412	.	-	0	Parent=comp154754_c0_seq1.mrna1
Chr2	gffcl	locus	37729852	37730316	.	-	.	ID=RLOC_00016548;geneIDs=comp135756_c0_seq1.path1;transcripts=comp135756_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37729852	37730316	.	-	.	ID=comp135756_c0_seq1.mrna1;geneID=comp135756_c0_seq1.path1;Name=comp135756_c0_seq1;Dir=indeterminatecoverage=97.1;identity=98.9;matches=460;mismatches=5;indels=0;unknowns=0;Target=comp135756_c0_seq1 478 14 .;CDS_Target=comp135756_c0_seq1 100 44 .;locus=RLOC_00016548
Chr2	stalkie_big_nohaplotig	exon	37729852	37730316	98	-	.	Parent=comp135756_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37730230	37730286	.	-	0	Parent=comp135756_c0_seq1.mrna1
Chr2	gffcl	locus	37730334	37735137	.	-	.	ID=RLOC_00016549;geneIDs=ORF1292.path1;transcripts=ORF1292.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37730334	37735137	.	-	.	ID=ORF1292.mrna1;geneID=ORF1292.path1;Name=ORF1292;Dir=sensecoverage=100.0;identity=99.8;matches=1150;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016549
Chr2	stalkie_big_nohaplotig	exon	37730334	37730546	99	-	.	Parent=ORF1292.mrna1;Target=ORF1292 940 1152 +
Chr2	stalkie_big_nohaplotig	exon	37734199	37735137	99	-	.	Parent=ORF1292.mrna1;Target=ORF1292 1 939 +
Chr2	stalkie_big_nohaplotig	CDS	37730334	37730546	.	-	0	Parent=ORF1292.mrna1;Target=ORF1292 940 1152 +
Chr2	stalkie_big_nohaplotig	CDS	37734199	37735137	.	-	0	Parent=ORF1292.mrna1;Target=ORF1292 1 939 +
Chr2	gffcl	locus	37738190	37739227	.	+	.	ID=RLOC_00016550;geneIDs=FBgn0002607.2.path1;transcripts=FBgn0002607.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37738190	37739227	.	+	.	ID=FBgn0002607.2.mrna1;geneID=FBgn0002607.2.path1;Name=FBgn0002607.2;Dir=sensecoverage=100.0;identity=100.0;matches=633;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016550
Chr2	stalkie_big_nohaplotig	exon	37738190	37738212	100	+	.	Parent=FBgn0002607.2.mrna1;Target=FBgn0002607.2 1 23 +
Chr2	stalkie_big_nohaplotig	exon	37738327	37738433	100	+	.	Parent=FBgn0002607.2.mrna1;Target=FBgn0002607.2 24 130 +
Chr2	stalkie_big_nohaplotig	exon	37738725	37739227	100	+	.	Parent=FBgn0002607.2.mrna1;Target=FBgn0002607.2 131 633 +
Chr2	stalkie_big_nohaplotig	CDS	37738190	37738212	.	+	0	Parent=FBgn0002607.2.mrna1;Target=FBgn0002607.2 1 23 +
Chr2	stalkie_big_nohaplotig	CDS	37738327	37738433	.	+	1	Parent=FBgn0002607.2.mrna1;Target=FBgn0002607.2 24 130 +
Chr2	stalkie_big_nohaplotig	CDS	37738725	37739227	.	+	2	Parent=FBgn0002607.2.mrna1;Target=FBgn0002607.2 131 633 +
Chr2	gffcl	locus	37742005	37745234	.	-	.	ID=RLOC_00016551;geneIDs=FBgn0028552.1.path1;transcripts=FBgn0028552.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37742005	37745234	.	-	.	ID=FBgn0028552.1.mrna1;geneID=FBgn0028552.1.path1;Name=FBgn0028552.1;Dir=sensecoverage=100.0;identity=99.9;matches=1025;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016551
Chr2	stalkie_big_nohaplotig	exon	37742005	37742085	100	-	.	Parent=FBgn0028552.1.mrna1;Target=FBgn0028552.1 946 1026 +
Chr2	stalkie_big_nohaplotig	exon	37742145	37742532	100	-	.	Parent=FBgn0028552.1.mrna1;Target=FBgn0028552.1 558 945 +
Chr2	stalkie_big_nohaplotig	exon	37742602	37742672	100	-	.	Parent=FBgn0028552.1.mrna1;Target=FBgn0028552.1 487 557 +
Chr2	stalkie_big_nohaplotig	exon	37742774	37742968	100	-	.	Parent=FBgn0028552.1.mrna1;Target=FBgn0028552.1 292 486 +
Chr2	stalkie_big_nohaplotig	exon	37743615	37743730	100	-	.	Parent=FBgn0028552.1.mrna1;Target=FBgn0028552.1 176 291 +
Chr2	stalkie_big_nohaplotig	exon	37745007	37745074	100	-	.	Parent=FBgn0028552.1.mrna1;Target=FBgn0028552.1 108 175 +
Chr2	stalkie_big_nohaplotig	exon	37745128	37745234	99	-	.	Parent=FBgn0028552.1.mrna1;Target=FBgn0028552.1 1 107 +
Chr2	stalkie_big_nohaplotig	CDS	37742005	37742085	.	-	0	Parent=FBgn0028552.1.mrna1;Target=FBgn0028552.1 946 1026 +
Chr2	stalkie_big_nohaplotig	CDS	37742145	37742532	.	-	1	Parent=FBgn0028552.1.mrna1;Target=FBgn0028552.1 558 945 +
Chr2	stalkie_big_nohaplotig	CDS	37742602	37742672	.	-	0	Parent=FBgn0028552.1.mrna1;Target=FBgn0028552.1 487 557 +
Chr2	stalkie_big_nohaplotig	CDS	37742774	37742968	.	-	0	Parent=FBgn0028552.1.mrna1;Target=FBgn0028552.1 292 486 +
Chr2	stalkie_big_nohaplotig	CDS	37743615	37743730	.	-	2	Parent=FBgn0028552.1.mrna1;Target=FBgn0028552.1 176 291 +
Chr2	stalkie_big_nohaplotig	CDS	37745007	37745074	.	-	1	Parent=FBgn0028552.1.mrna1;Target=FBgn0028552.1 108 175 +
Chr2	stalkie_big_nohaplotig	CDS	37745128	37745234	.	-	0	Parent=FBgn0028552.1.mrna1;Target=FBgn0028552.1 1 107 +
Chr2	gffcl	locus	37748341	37750053	.	+	.	ID=RLOC_00016552;geneIDs=FBgn0034047.2.path1;transcripts=FBgn0034047.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37748341	37750053	.	+	.	ID=FBgn0034047.2.mrna1;geneID=FBgn0034047.2.path1;Name=FBgn0034047.2;Dir=sensecoverage=100.0;identity=99.8;matches=1138;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016552
Chr2	stalkie_big_nohaplotig	exon	37748341	37748515	100	+	.	Parent=FBgn0034047.2.mrna1;Target=FBgn0034047.2 1 175 +
Chr2	stalkie_big_nohaplotig	exon	37748662	37749383	99	+	.	Parent=FBgn0034047.2.mrna1;Target=FBgn0034047.2 176 897 +
Chr2	stalkie_big_nohaplotig	exon	37749447	37749645	100	+	.	Parent=FBgn0034047.2.mrna1;Target=FBgn0034047.2 898 1096 +
Chr2	stalkie_big_nohaplotig	exon	37750010	37750053	100	+	.	Parent=FBgn0034047.2.mrna1;Target=FBgn0034047.2 1097 1140 +
Chr2	stalkie_big_nohaplotig	CDS	37748341	37748515	.	+	0	Parent=FBgn0034047.2.mrna1;Target=FBgn0034047.2 1 175 +
Chr2	stalkie_big_nohaplotig	CDS	37748662	37749383	.	+	2	Parent=FBgn0034047.2.mrna1;Target=FBgn0034047.2 176 897 +
Chr2	stalkie_big_nohaplotig	CDS	37749447	37749645	.	+	0	Parent=FBgn0034047.2.mrna1;Target=FBgn0034047.2 898 1096 +
Chr2	stalkie_big_nohaplotig	CDS	37750010	37750053	.	+	2	Parent=FBgn0034047.2.mrna1;Target=FBgn0034047.2 1097 1140 +
Chr2	gffcl	locus	37751570	37752298	.	-	.	ID=RLOC_00016553;geneIDs=FBgn0035088.1.path1;transcripts=FBgn0035088.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37751570	37752298	.	-	.	ID=FBgn0035088.1.mrna1;geneID=FBgn0035088.1.path1;Name=FBgn0035088.1;Dir=sensecoverage=100.0;identity=99.9;matches=668;mismatches=0;indels=1;unknowns=0;locus=RLOC_00016553
Chr2	stalkie_big_nohaplotig	exon	37751570	37751781	99	-	.	Parent=FBgn0035088.1.mrna1;Target=FBgn0035088.1 457 669 +
Chr2	stalkie_big_nohaplotig	exon	37751843	37752298	100	-	.	Parent=FBgn0035088.1.mrna1;Target=FBgn0035088.1 1 456 +
Chr2	stalkie_big_nohaplotig	CDS	37751570	37751781	.	-	0	Parent=FBgn0035088.1.mrna1;Target=FBgn0035088.1 457 669 +
Chr2	stalkie_big_nohaplotig	CDS	37751843	37752298	.	-	0	Parent=FBgn0035088.1.mrna1;Target=FBgn0035088.1 1 456 +
Chr2	gffcl	locus	37754005	37755366	.	-	.	ID=RLOC_00016554;geneIDs=FBgn0022708.1.path1;transcripts=FBgn0022708.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37754005	37755366	.	-	.	ID=FBgn0022708.1.mrna1;geneID=FBgn0022708.1.path1;Name=FBgn0022708.1;Dir=sensecoverage=100.0;identity=100.0;matches=729;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016554
Chr2	stalkie_big_nohaplotig	exon	37754005	37754217	100	-	.	Parent=FBgn0022708.1.mrna1;Target=FBgn0022708.1 517 729 +
Chr2	stalkie_big_nohaplotig	exon	37754277	37754444	100	-	.	Parent=FBgn0022708.1.mrna1;Target=FBgn0022708.1 349 516 +
Chr2	stalkie_big_nohaplotig	exon	37754514	37754750	100	-	.	Parent=FBgn0022708.1.mrna1;Target=FBgn0022708.1 112 348 +
Chr2	stalkie_big_nohaplotig	exon	37755256	37755366	100	-	.	Parent=FBgn0022708.1.mrna1;Target=FBgn0022708.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	37754005	37754217	.	-	0	Parent=FBgn0022708.1.mrna1;Target=FBgn0022708.1 517 729 +
Chr2	stalkie_big_nohaplotig	CDS	37754277	37754444	.	-	0	Parent=FBgn0022708.1.mrna1;Target=FBgn0022708.1 349 516 +
Chr2	stalkie_big_nohaplotig	CDS	37754514	37754750	.	-	0	Parent=FBgn0022708.1.mrna1;Target=FBgn0022708.1 112 348 +
Chr2	stalkie_big_nohaplotig	CDS	37755256	37755366	.	-	0	Parent=FBgn0022708.1.mrna1;Target=FBgn0022708.1 1 111 +
Chr2	gffcl	locus	37756059	37763936	.	+	.	ID=RLOC_00016555;geneIDs=FBgn0034964.1.path1;transcripts=FBgn0034964.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37756059	37763936	.	+	.	ID=FBgn0034964.1.mrna1;geneID=FBgn0034964.1.path1;Name=FBgn0034964.1;Dir=sensecoverage=100.0;identity=99.8;matches=6013;mismatches=11;indels=0;unknowns=0;locus=RLOC_00016555
Chr2	stalkie_big_nohaplotig	exon	37756059	37757355	99	+	.	Parent=FBgn0034964.1.mrna1;Target=FBgn0034964.1 1 1297 +
Chr2	stalkie_big_nohaplotig	exon	37758170	37759149	100	+	.	Parent=FBgn0034964.1.mrna1;Target=FBgn0034964.1 1298 2277 +
Chr2	stalkie_big_nohaplotig	exon	37760190	37763936	99	+	.	Parent=FBgn0034964.1.mrna1;Target=FBgn0034964.1 2278 6024 +
Chr2	stalkie_big_nohaplotig	CDS	37756059	37757355	.	+	0	Parent=FBgn0034964.1.mrna1;Target=FBgn0034964.1 1 1297 +
Chr2	stalkie_big_nohaplotig	CDS	37758170	37759149	.	+	2	Parent=FBgn0034964.1.mrna1;Target=FBgn0034964.1 1298 2277 +
Chr2	stalkie_big_nohaplotig	CDS	37760190	37763936	.	+	0	Parent=FBgn0034964.1.mrna1;Target=FBgn0034964.1 2278 6024 +
Chr2	gffcl	locus	37765021	37773844	.	-	.	ID=RLOC_00016556;geneIDs=FBgn0261403.1.path1,comp84400_c0_seq1.path1;transcripts=FBgn0261403.1.mrna1,comp84400_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37765021	37773844	.	-	.	ID=FBgn0261403.1.mrna1;geneID=FBgn0261403.1.path1;Name=FBgn0261403.1;Dir=sensecoverage=100.0;identity=100.0;matches=3174;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016556
Chr2	stalkie_big_nohaplotig	exon	37765021	37765279	100	-	.	Parent=FBgn0261403.1.mrna1;Target=FBgn0261403.1 2916 3174 +
Chr2	stalkie_big_nohaplotig	exon	37765341	37765521	100	-	.	Parent=FBgn0261403.1.mrna1;Target=FBgn0261403.1 2735 2915 +
Chr2	stalkie_big_nohaplotig	exon	37766258	37767986	100	-	.	Parent=FBgn0261403.1.mrna1;Target=FBgn0261403.1 1006 2734 +
Chr2	stalkie_big_nohaplotig	exon	37768939	37769134	100	-	.	Parent=FBgn0261403.1.mrna1;Target=FBgn0261403.1 810 1005 +
Chr2	stalkie_big_nohaplotig	exon	37769193	37769389	100	-	.	Parent=FBgn0261403.1.mrna1;Target=FBgn0261403.1 613 809 +
Chr2	stalkie_big_nohaplotig	exon	37769704	37769772	100	-	.	Parent=FBgn0261403.1.mrna1;Target=FBgn0261403.1 544 612 +
Chr2	stalkie_big_nohaplotig	exon	37769843	37770026	100	-	.	Parent=FBgn0261403.1.mrna1;Target=FBgn0261403.1 360 543 +
Chr2	stalkie_big_nohaplotig	exon	37770095	37770305	100	-	.	Parent=FBgn0261403.1.mrna1;Target=FBgn0261403.1 149 359 +
Chr2	stalkie_big_nohaplotig	exon	37773697	37773844	100	-	.	Parent=FBgn0261403.1.mrna1;Target=FBgn0261403.1 1 148 +
Chr2	stalkie_big_nohaplotig	CDS	37765021	37765279	.	-	1	Parent=FBgn0261403.1.mrna1;Target=FBgn0261403.1 2916 3174 +
Chr2	stalkie_big_nohaplotig	CDS	37765341	37765521	.	-	2	Parent=FBgn0261403.1.mrna1;Target=FBgn0261403.1 2735 2915 +
Chr2	stalkie_big_nohaplotig	CDS	37766258	37767986	.	-	0	Parent=FBgn0261403.1.mrna1;Target=FBgn0261403.1 1006 2734 +
Chr2	stalkie_big_nohaplotig	CDS	37768939	37769134	.	-	1	Parent=FBgn0261403.1.mrna1;Target=FBgn0261403.1 810 1005 +
Chr2	stalkie_big_nohaplotig	CDS	37769193	37769389	.	-	0	Parent=FBgn0261403.1.mrna1;Target=FBgn0261403.1 613 809 +
Chr2	stalkie_big_nohaplotig	CDS	37769704	37769772	.	-	0	Parent=FBgn0261403.1.mrna1;Target=FBgn0261403.1 544 612 +
Chr2	stalkie_big_nohaplotig	CDS	37769843	37770026	.	-	1	Parent=FBgn0261403.1.mrna1;Target=FBgn0261403.1 360 543 +
Chr2	stalkie_big_nohaplotig	CDS	37770095	37770305	.	-	2	Parent=FBgn0261403.1.mrna1;Target=FBgn0261403.1 149 359 +
Chr2	stalkie_big_nohaplotig	CDS	37773697	37773844	.	-	0	Parent=FBgn0261403.1.mrna1;Target=FBgn0261403.1 1 148 +
Chr2	stalkie_big_nohaplotig	mRNA	37769344	37769726	.	-	.	ID=comp84400_c0_seq1.mrna1;geneID=comp84400_c0_seq1.path1;Name=comp84400_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=382;mismatches=1;indels=0;unknowns=0;Target=comp84400_c0_seq1 383 1 .;CDS_Target=comp84400_c0_seq1 266 150 .;locus=RLOC_00016556
Chr2	stalkie_big_nohaplotig	exon	37769344	37769726	99	-	.	Parent=comp84400_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37769461	37769577	.	-	0	Parent=comp84400_c0_seq1.mrna1
Chr2	gffcl	locus	37782290	37795225	.	-	.	ID=RLOC_00016557;geneIDs=FBgn0010435.1.path1;transcripts=FBgn0010435.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37782290	37795225	.	-	.	ID=FBgn0010435.1.mrna1;geneID=FBgn0010435.1.path1;Name=FBgn0010435.1;Dir=sensecoverage=100.0;identity=100.0;matches=1584;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016557
Chr2	stalkie_big_nohaplotig	exon	37782290	37782661	100	-	.	Parent=FBgn0010435.1.mrna1;Target=FBgn0010435.1 1213 1584 +
Chr2	stalkie_big_nohaplotig	exon	37782825	37782946	100	-	.	Parent=FBgn0010435.1.mrna1;Target=FBgn0010435.1 1091 1212 +
Chr2	stalkie_big_nohaplotig	exon	37783007	37783385	100	-	.	Parent=FBgn0010435.1.mrna1;Target=FBgn0010435.1 712 1090 +
Chr2	stalkie_big_nohaplotig	exon	37784291	37784483	100	-	.	Parent=FBgn0010435.1.mrna1;Target=FBgn0010435.1 519 711 +
Chr2	stalkie_big_nohaplotig	exon	37784558	37784731	100	-	.	Parent=FBgn0010435.1.mrna1;Target=FBgn0010435.1 345 518 +
Chr2	stalkie_big_nohaplotig	exon	37784790	37785042	100	-	.	Parent=FBgn0010435.1.mrna1;Target=FBgn0010435.1 92 344 +
Chr2	stalkie_big_nohaplotig	exon	37785157	37785232	100	-	.	Parent=FBgn0010435.1.mrna1;Target=FBgn0010435.1 16 91 +
Chr2	stalkie_big_nohaplotig	exon	37795211	37795225	100	-	.	Parent=FBgn0010435.1.mrna1;Target=FBgn0010435.1 1 15 +
Chr2	stalkie_big_nohaplotig	CDS	37782290	37782661	.	-	0	Parent=FBgn0010435.1.mrna1;Target=FBgn0010435.1 1213 1584 +
Chr2	stalkie_big_nohaplotig	CDS	37782825	37782946	.	-	2	Parent=FBgn0010435.1.mrna1;Target=FBgn0010435.1 1091 1212 +
Chr2	stalkie_big_nohaplotig	CDS	37783007	37783385	.	-	0	Parent=FBgn0010435.1.mrna1;Target=FBgn0010435.1 712 1090 +
Chr2	stalkie_big_nohaplotig	CDS	37784291	37784483	.	-	1	Parent=FBgn0010435.1.mrna1;Target=FBgn0010435.1 519 711 +
Chr2	stalkie_big_nohaplotig	CDS	37784558	37784731	.	-	1	Parent=FBgn0010435.1.mrna1;Target=FBgn0010435.1 345 518 +
Chr2	stalkie_big_nohaplotig	CDS	37784790	37785042	.	-	2	Parent=FBgn0010435.1.mrna1;Target=FBgn0010435.1 92 344 +
Chr2	stalkie_big_nohaplotig	CDS	37785157	37785232	.	-	0	Parent=FBgn0010435.1.mrna1;Target=FBgn0010435.1 16 91 +
Chr2	stalkie_big_nohaplotig	CDS	37795211	37795225	.	-	0	Parent=FBgn0010435.1.mrna1;Target=FBgn0010435.1 1 15 +
Chr2	gffcl	locus	37805042	37812165	.	-	.	ID=RLOC_00016558;geneIDs=FBgn0042630.1.path1;transcripts=FBgn0042630.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37805042	37812165	.	-	.	ID=FBgn0042630.1.mrna1;geneID=FBgn0042630.1.path1;Name=FBgn0042630.1;Dir=sensecoverage=100.0;identity=99.8;matches=1725;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016558
Chr2	stalkie_big_nohaplotig	exon	37805042	37806574	99	-	.	Parent=FBgn0042630.1.mrna1;Target=FBgn0042630.1 196 1728 +
Chr2	stalkie_big_nohaplotig	exon	37811971	37812165	100	-	.	Parent=FBgn0042630.1.mrna1;Target=FBgn0042630.1 1 195 +
Chr2	stalkie_big_nohaplotig	CDS	37805042	37806574	.	-	0	Parent=FBgn0042630.1.mrna1;Target=FBgn0042630.1 196 1728 +
Chr2	stalkie_big_nohaplotig	CDS	37811971	37812165	.	-	0	Parent=FBgn0042630.1.mrna1;Target=FBgn0042630.1 1 195 +
Chr2	gffcl	locus	37815731	37825081	.	-	.	ID=RLOC_00016559;geneIDs=FBgn0019948.1.path1;transcripts=FBgn0019948.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37815731	37825081	.	-	.	ID=FBgn0019948.1.mrna1;geneID=FBgn0019948.1.path1;Name=FBgn0019948.1;Dir=sensecoverage=100.0;identity=100.0;matches=1101;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016559
Chr2	stalkie_big_nohaplotig	exon	37815731	37815896	100	-	.	Parent=FBgn0019948.1.mrna1;Target=FBgn0019948.1 936 1101 +
Chr2	stalkie_big_nohaplotig	exon	37815971	37816309	100	-	.	Parent=FBgn0019948.1.mrna1;Target=FBgn0019948.1 597 935 +
Chr2	stalkie_big_nohaplotig	exon	37816382	37816430	100	-	.	Parent=FBgn0019948.1.mrna1;Target=FBgn0019948.1 548 596 +
Chr2	stalkie_big_nohaplotig	exon	37817175	37817307	100	-	.	Parent=FBgn0019948.1.mrna1;Target=FBgn0019948.1 415 547 +
Chr2	stalkie_big_nohaplotig	exon	37817369	37817441	100	-	.	Parent=FBgn0019948.1.mrna1;Target=FBgn0019948.1 342 414 +
Chr2	stalkie_big_nohaplotig	exon	37818284	37818371	100	-	.	Parent=FBgn0019948.1.mrna1;Target=FBgn0019948.1 254 341 +
Chr2	stalkie_big_nohaplotig	exon	37824175	37824232	100	-	.	Parent=FBgn0019948.1.mrna1;Target=FBgn0019948.1 196 253 +
Chr2	stalkie_big_nohaplotig	exon	37824887	37825081	100	-	.	Parent=FBgn0019948.1.mrna1;Target=FBgn0019948.1 1 195 +
Chr2	stalkie_big_nohaplotig	CDS	37815731	37815896	.	-	1	Parent=FBgn0019948.1.mrna1;Target=FBgn0019948.1 936 1101 +
Chr2	stalkie_big_nohaplotig	CDS	37815971	37816309	.	-	1	Parent=FBgn0019948.1.mrna1;Target=FBgn0019948.1 597 935 +
Chr2	stalkie_big_nohaplotig	CDS	37816382	37816430	.	-	2	Parent=FBgn0019948.1.mrna1;Target=FBgn0019948.1 548 596 +
Chr2	stalkie_big_nohaplotig	CDS	37817175	37817307	.	-	0	Parent=FBgn0019948.1.mrna1;Target=FBgn0019948.1 415 547 +
Chr2	stalkie_big_nohaplotig	CDS	37817369	37817441	.	-	1	Parent=FBgn0019948.1.mrna1;Target=FBgn0019948.1 342 414 +
Chr2	stalkie_big_nohaplotig	CDS	37818284	37818371	.	-	2	Parent=FBgn0019948.1.mrna1;Target=FBgn0019948.1 254 341 +
Chr2	stalkie_big_nohaplotig	CDS	37824175	37824232	.	-	0	Parent=FBgn0019948.1.mrna1;Target=FBgn0019948.1 196 253 +
Chr2	stalkie_big_nohaplotig	CDS	37824887	37825081	.	-	0	Parent=FBgn0019948.1.mrna1;Target=FBgn0019948.1 1 195 +
Chr2	gffcl	locus	37827943	37829570	.	+	.	ID=RLOC_00016560;geneIDs=ORF881.path1;transcripts=ORF881.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37827943	37829570	.	+	.	ID=ORF881.mrna1;geneID=ORF881.path1;Name=ORF881;Dir=sensecoverage=100.0;identity=99.9;matches=1363;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016560
Chr2	stalkie_big_nohaplotig	exon	37827943	37828187	100	+	.	Parent=ORF881.mrna1;Target=ORF881 1 245 +
Chr2	stalkie_big_nohaplotig	exon	37828256	37828383	100	+	.	Parent=ORF881.mrna1;Target=ORF881 246 373 +
Chr2	stalkie_big_nohaplotig	exon	37828467	37828678	99	+	.	Parent=ORF881.mrna1;Target=ORF881 374 585 +
Chr2	stalkie_big_nohaplotig	exon	37828731	37828914	100	+	.	Parent=ORF881.mrna1;Target=ORF881 586 769 +
Chr2	stalkie_big_nohaplotig	exon	37828975	37829570	99	+	.	Parent=ORF881.mrna1;Target=ORF881 770 1365 +
Chr2	stalkie_big_nohaplotig	CDS	37827943	37828187	.	+	0	Parent=ORF881.mrna1;Target=ORF881 1 245 +
Chr2	stalkie_big_nohaplotig	CDS	37828256	37828383	.	+	1	Parent=ORF881.mrna1;Target=ORF881 246 373 +
Chr2	stalkie_big_nohaplotig	CDS	37828467	37828678	.	+	2	Parent=ORF881.mrna1;Target=ORF881 374 585 +
Chr2	stalkie_big_nohaplotig	CDS	37828731	37828914	.	+	0	Parent=ORF881.mrna1;Target=ORF881 586 769 +
Chr2	stalkie_big_nohaplotig	CDS	37828975	37829570	.	+	2	Parent=ORF881.mrna1;Target=ORF881 770 1365 +
Chr2	stalkie_big_nohaplotig	mRNA	37840258	37842453	.	-	.	ID=comp52983_c0_seq1.mrna1;geneID=comp52983_c0_seq1.path1;Name=comp52983_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=248;mismatches=0;indels=0;unknowns=0;Target=comp52983_c0_seq1 70 177 +;locus=RLOC_00016561
Chr2	stalkie_big_nohaplotig	exon	37840258	37840281	100	-	.	Parent=comp52983_c0_seq1.mrna1;Target=comp52983_c0_seq1 225 248 +
Chr2	stalkie_big_nohaplotig	exon	37842230	37842453	100	-	.	Parent=comp52983_c0_seq1.mrna1;Target=comp52983_c0_seq1 1 224 +
Chr2	stalkie_big_nohaplotig	CDS	37842277	37842384	.	-	0	Parent=comp52983_c0_seq1.mrna1
Chr2	gffcl	locus	37848169	37867743	.	+	.	ID=RLOC_00016562;geneIDs=FBgn0034962.1.path2;transcripts=FBgn0034962.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	37848169	37867743	.	+	.	ID=FBgn0034962.1.mrna2;geneID=FBgn0034962.1.path2;Name=FBgn0034962.1;Dir=indeterminatecoverage=84.8;identity=99.5;matches=1248;mismatches=6;indels=0;unknowns=0;Target=FBgn0034962.1 1212 1015 .;locus=RLOC_00016562
Chr2	stalkie_big_nohaplotig	exon	37848169	37848171	100	+	.	Parent=FBgn0034962.1.mrna2;Target=FBgn0034962.1 228 226 .
Chr2	stalkie_big_nohaplotig	exon	37848704	37848709	100	+	.	Parent=FBgn0034962.1.mrna2;Target=FBgn0034962.1 234 229 .
Chr2	stalkie_big_nohaplotig	exon	37863769	37863770	100	+	.	Parent=FBgn0034962.1.mrna2;Target=FBgn0034962.1 236 235 .
Chr2	stalkie_big_nohaplotig	exon	37866501	37867743	99	+	.	Parent=FBgn0034962.1.mrna2;Target=FBgn0034962.1 1479 237 .
Chr2	stalkie_big_nohaplotig	CDS	37867279	37867476	.	+	2	Parent=FBgn0034962.1.mrna2
Chr2	gffcl	locus	37869253	37870145	.	-	.	ID=RLOC_00016563;geneIDs=FBgn0034961.1.path1;transcripts=FBgn0034961.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37869253	37870145	.	-	.	ID=FBgn0034961.1.mrna1;geneID=FBgn0034961.1.path1;Name=FBgn0034961.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=892;mismatches=1;indels=1;unknowns=0;Target=FBgn0034961.1 894 1 .;CDS_Target=FBgn0034961.1 113 3 .;locus=RLOC_00016563
Chr2	stalkie_big_nohaplotig	exon	37869253	37870145	99	-	.	Parent=FBgn0034961.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37870034	37870143	.	-	0	Parent=FBgn0034961.1.mrna1
Chr2	gffcl	locus	37873453	37877255	.	-	.	ID=RLOC_00016564;geneIDs=FBgn0002791.1.path1;transcripts=FBgn0002791.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37873453	37877255	.	-	.	ID=FBgn0002791.1.mrna1;geneID=FBgn0002791.1.path1;Name=FBgn0002791.1;Dir=sensecoverage=100.0;identity=99.8;matches=2356;mismatches=5;indels=0;unknowns=0;locus=RLOC_00016564
Chr2	stalkie_big_nohaplotig	exon	37873453	37873650	99	-	.	Parent=FBgn0002791.1.mrna1;Target=FBgn0002791.1 2164 2361 +
Chr2	stalkie_big_nohaplotig	exon	37873722	37873969	100	-	.	Parent=FBgn0002791.1.mrna1;Target=FBgn0002791.1 1916 2163 +
Chr2	stalkie_big_nohaplotig	exon	37874681	37874944	99	-	.	Parent=FBgn0002791.1.mrna1;Target=FBgn0002791.1 1652 1915 +
Chr2	stalkie_big_nohaplotig	exon	37875009	37875710	100	-	.	Parent=FBgn0002791.1.mrna1;Target=FBgn0002791.1 950 1651 +
Chr2	stalkie_big_nohaplotig	exon	37875768	37875945	99	-	.	Parent=FBgn0002791.1.mrna1;Target=FBgn0002791.1 772 949 +
Chr2	stalkie_big_nohaplotig	exon	37876352	37876596	99	-	.	Parent=FBgn0002791.1.mrna1;Target=FBgn0002791.1 527 771 +
Chr2	stalkie_big_nohaplotig	exon	37876670	37877117	99	-	.	Parent=FBgn0002791.1.mrna1;Target=FBgn0002791.1 79 526 +
Chr2	stalkie_big_nohaplotig	exon	37877178	37877255	100	-	.	Parent=FBgn0002791.1.mrna1;Target=FBgn0002791.1 1 78 +
Chr2	stalkie_big_nohaplotig	CDS	37873453	37873650	.	-	0	Parent=FBgn0002791.1.mrna1;Target=FBgn0002791.1 2164 2361 +
Chr2	stalkie_big_nohaplotig	CDS	37873722	37873969	.	-	2	Parent=FBgn0002791.1.mrna1;Target=FBgn0002791.1 1916 2163 +
Chr2	stalkie_big_nohaplotig	CDS	37874681	37874944	.	-	2	Parent=FBgn0002791.1.mrna1;Target=FBgn0002791.1 1652 1915 +
Chr2	stalkie_big_nohaplotig	CDS	37875009	37875710	.	-	2	Parent=FBgn0002791.1.mrna1;Target=FBgn0002791.1 950 1651 +
Chr2	stalkie_big_nohaplotig	CDS	37875768	37875945	.	-	0	Parent=FBgn0002791.1.mrna1;Target=FBgn0002791.1 772 949 +
Chr2	stalkie_big_nohaplotig	CDS	37876352	37876596	.	-	2	Parent=FBgn0002791.1.mrna1;Target=FBgn0002791.1 527 771 +
Chr2	stalkie_big_nohaplotig	CDS	37876670	37877117	.	-	0	Parent=FBgn0002791.1.mrna1;Target=FBgn0002791.1 79 526 +
Chr2	stalkie_big_nohaplotig	CDS	37877178	37877255	.	-	0	Parent=FBgn0002791.1.mrna1;Target=FBgn0002791.1 1 78 +
Chr2	gffcl	locus	37879145	37892940	.	+	.	ID=RLOC_00016565;geneIDs=FBgn0003353.1.path1;transcripts=FBgn0003353.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37879145	37892940	.	+	.	ID=FBgn0003353.1.mrna1;geneID=FBgn0003353.1.path1;Name=FBgn0003353.1;Dir=sensecoverage=100.0;identity=99.9;matches=2679;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016565
Chr2	stalkie_big_nohaplotig	exon	37879145	37879159	100	+	.	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 1 15 +
Chr2	stalkie_big_nohaplotig	exon	37880755	37881696	100	+	.	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 16 957 +
Chr2	stalkie_big_nohaplotig	exon	37883037	37883280	100	+	.	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 958 1201 +
Chr2	stalkie_big_nohaplotig	exon	37883597	37883778	100	+	.	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 1202 1383 +
Chr2	stalkie_big_nohaplotig	exon	37884089	37884243	100	+	.	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 1384 1538 +
Chr2	stalkie_big_nohaplotig	exon	37884333	37884453	100	+	.	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 1539 1659 +
Chr2	stalkie_big_nohaplotig	exon	37886532	37886652	100	+	.	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 1660 1780 +
Chr2	stalkie_big_nohaplotig	exon	37887716	37887834	100	+	.	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 1781 1899 +
Chr2	stalkie_big_nohaplotig	exon	37887896	37888086	100	+	.	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 1900 2090 +
Chr2	stalkie_big_nohaplotig	exon	37890191	37890333	100	+	.	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 2091 2233 +
Chr2	stalkie_big_nohaplotig	exon	37890627	37890820	100	+	.	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 2234 2427 +
Chr2	stalkie_big_nohaplotig	exon	37891473	37891567	100	+	.	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 2428 2522 +
Chr2	stalkie_big_nohaplotig	exon	37891642	37891766	98	+	.	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 2523 2647 +
Chr2	stalkie_big_nohaplotig	exon	37892906	37892940	97	+	.	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 2648 2682 +
Chr2	stalkie_big_nohaplotig	CDS	37879145	37879159	.	+	0	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 1 15 +
Chr2	stalkie_big_nohaplotig	CDS	37880755	37881696	.	+	0	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 16 957 +
Chr2	stalkie_big_nohaplotig	CDS	37883037	37883280	.	+	0	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 958 1201 +
Chr2	stalkie_big_nohaplotig	CDS	37883597	37883778	.	+	2	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 1202 1383 +
Chr2	stalkie_big_nohaplotig	CDS	37884089	37884243	.	+	0	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 1384 1538 +
Chr2	stalkie_big_nohaplotig	CDS	37884333	37884453	.	+	1	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 1539 1659 +
Chr2	stalkie_big_nohaplotig	CDS	37886532	37886652	.	+	0	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 1660 1780 +
Chr2	stalkie_big_nohaplotig	CDS	37887716	37887834	.	+	2	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 1781 1899 +
Chr2	stalkie_big_nohaplotig	CDS	37887896	37888086	.	+	0	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 1900 2090 +
Chr2	stalkie_big_nohaplotig	CDS	37890191	37890333	.	+	1	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 2091 2233 +
Chr2	stalkie_big_nohaplotig	CDS	37890627	37890820	.	+	2	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 2234 2427 +
Chr2	stalkie_big_nohaplotig	CDS	37891473	37891567	.	+	0	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 2428 2522 +
Chr2	stalkie_big_nohaplotig	CDS	37891642	37891766	.	+	1	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 2523 2647 +
Chr2	stalkie_big_nohaplotig	CDS	37892906	37892940	.	+	2	Parent=FBgn0003353.1.mrna1;Target=FBgn0003353.1 2648 2682 +
Chr2	gffcl	locus	37884712	37885123	.	-	.	ID=RLOC_00016566;geneIDs=comp114159_c0_seq1.path1;transcripts=comp114159_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37884712	37885123	.	-	.	ID=comp114159_c0_seq1.mrna1;geneID=comp114159_c0_seq1.path1;Name=comp114159_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.8;matches=411;mismatches=1;indels=0;unknowns=0;Target=comp114159_c0_seq1 412 1 .;CDS_Target=comp114159_c0_seq1 164 75 .;locus=RLOC_00016566
Chr2	stalkie_big_nohaplotig	exon	37884712	37885123	99	-	.	Parent=comp114159_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37884960	37885049	.	-	0	Parent=comp114159_c0_seq1.mrna1
Chr2	gffcl	locus	37886972	37887289	.	-	.	ID=RLOC_00016567;geneIDs=comp159375_c0_seq1.path2;transcripts=comp159375_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	37886972	37887289	.	-	.	ID=comp159375_c0_seq1.mrna2;geneID=comp159375_c0_seq1.path2;Name=comp159375_c0_seq1;Dir=indeterminatecoverage=13.5;identity=99.4;matches=316;mismatches=2;indels=0;unknowns=0;Target=comp159375_c0_seq1 2349 2032 .;locus=RLOC_00016567
Chr2	stalkie_big_nohaplotig	exon	37886972	37887289	99	-	.	Parent=comp159375_c0_seq1.mrna2
Chr2	gffcl	locus	37914795	37945566	.	+	.	ID=RLOC_00016568;geneIDs=FBgn0045063.1.path1,comp160036_c0_seq1.path1;transcripts=comp160036_c0_seq1.mrna1,FBgn0045063.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37914795	37945566	.	+	.	ID=comp160036_c0_seq1.mrna1;geneID=comp160036_c0_seq1.path1;Name=comp160036_c0_seq1;Dir=antisensecoverage=89.2;identity=99.7;matches=3461;mismatches=8;indels=3;unknowns=0;locus=RLOC_00016568
Chr2	stalkie_big_nohaplotig	exon	37914795	37914982	99	+	.	Parent=comp160036_c0_seq1.mrna1;Target=comp160036_c0_seq1 3283 3470 -
Chr2	stalkie_big_nohaplotig	exon	37916371	37916930	99	+	.	Parent=comp160036_c0_seq1.mrna1;Target=comp160036_c0_seq1 2723 3282 -
Chr2	stalkie_big_nohaplotig	exon	37917002	37917229	100	+	.	Parent=comp160036_c0_seq1.mrna1;Target=comp160036_c0_seq1 2495 2722 -
Chr2	stalkie_big_nohaplotig	exon	37940665	37941172	100	+	.	Parent=comp160036_c0_seq1.mrna1;Target=comp160036_c0_seq1 1987 2494 -
Chr2	stalkie_big_nohaplotig	exon	37941230	37941453	99	+	.	Parent=comp160036_c0_seq1.mrna1;Target=comp160036_c0_seq1 1763 1986 -
Chr2	stalkie_big_nohaplotig	exon	37943668	37943762	100	+	.	Parent=comp160036_c0_seq1.mrna1;Target=comp160036_c0_seq1 1668 1762 -
Chr2	stalkie_big_nohaplotig	exon	37943824	37943918	100	+	.	Parent=comp160036_c0_seq1.mrna1;Target=comp160036_c0_seq1 1573 1667 -
Chr2	stalkie_big_nohaplotig	exon	37943994	37945566	99	+	.	Parent=comp160036_c0_seq1.mrna1;Target=comp160036_c0_seq1 1 1572 -
Chr2	stalkie_big_nohaplotig	CDS	37914795	37914982	.	+	0	Parent=comp160036_c0_seq1.mrna1;Target=comp160036_c0_seq1 3283 3470 .
Chr2	stalkie_big_nohaplotig	CDS	37916371	37916930	.	+	1	Parent=comp160036_c0_seq1.mrna1;Target=comp160036_c0_seq1 2723 3282 .
Chr2	stalkie_big_nohaplotig	CDS	37917002	37917229	.	+	2	Parent=comp160036_c0_seq1.mrna1;Target=comp160036_c0_seq1 2495 2722 .
Chr2	stalkie_big_nohaplotig	CDS	37940665	37941172	.	+	2	Parent=comp160036_c0_seq1.mrna1;Target=comp160036_c0_seq1 1987 2494 .
Chr2	stalkie_big_nohaplotig	CDS	37941230	37941453	.	+	1	Parent=comp160036_c0_seq1.mrna1;Target=comp160036_c0_seq1 1763 1986 .
Chr2	stalkie_big_nohaplotig	CDS	37943668	37943762	.	+	2	Parent=comp160036_c0_seq1.mrna1;Target=comp160036_c0_seq1 1668 1762 .
Chr2	stalkie_big_nohaplotig	CDS	37943824	37943918	.	+	0	Parent=comp160036_c0_seq1.mrna1;Target=comp160036_c0_seq1 1573 1667 .
Chr2	stalkie_big_nohaplotig	CDS	37943994	37944153	.	+	1	Parent=comp160036_c0_seq1.mrna1;Target=comp160036_c0_seq1 1413 1572 .
Chr2	stalkie_big_nohaplotig	mRNA	37938243	37941458	.	+	.	ID=FBgn0045063.1.mrna1;geneID=FBgn0045063.1.path1;Name=FBgn0045063.1;Dir=sensecoverage=78.9;identity=99.6;matches=1707;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016568
Chr2	stalkie_big_nohaplotig	exon	37938243	37938430	100	+	.	Parent=FBgn0045063.1.mrna1;Target=FBgn0045063.1 118 305 +
Chr2	stalkie_big_nohaplotig	exon	37939806	37940365	99	+	.	Parent=FBgn0045063.1.mrna1;Target=FBgn0045063.1 306 865 +
Chr2	stalkie_big_nohaplotig	exon	37940437	37941172	99	+	.	Parent=FBgn0045063.1.mrna1;Target=FBgn0045063.1 866 1601 +
Chr2	stalkie_big_nohaplotig	exon	37941230	37941458	99	+	.	Parent=FBgn0045063.1.mrna1;Target=FBgn0045063.1 1602 1830 +
Chr2	stalkie_big_nohaplotig	CDS	37938243	37938430	.	+	0	Parent=FBgn0045063.1.mrna1;Target=FBgn0045063.1 118 305 +
Chr2	stalkie_big_nohaplotig	CDS	37939806	37940365	.	+	1	Parent=FBgn0045063.1.mrna1;Target=FBgn0045063.1 306 865 +
Chr2	stalkie_big_nohaplotig	CDS	37940437	37941172	.	+	2	Parent=FBgn0045063.1.mrna1;Target=FBgn0045063.1 866 1601 +
Chr2	stalkie_big_nohaplotig	CDS	37941230	37941458	.	+	1	Parent=FBgn0045063.1.mrna1;Target=FBgn0045063.1 1602 1830 +
Chr2	gffcl	locus	37922101	37946683	.	+	.	ID=RLOC_00016569;geneIDs=comp160532_c0_seq1.path1;transcripts=comp160532_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37922101	37946683	.	+	.	ID=comp160532_c0_seq1.mrna1;geneID=comp160532_c0_seq1.path1;Name=comp160532_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1095;mismatches=2;indels=0;unknowns=0;Target=comp160532_c0_seq1 132 1 .;locus=RLOC_00016569
Chr2	stalkie_big_nohaplotig	exon	37922101	37922735	99	+	.	Parent=comp160532_c0_seq1.mrna1;Target=comp160532_c0_seq1 635 1 .
Chr2	stalkie_big_nohaplotig	exon	37946222	37946683	100	+	.	Parent=comp160532_c0_seq1.mrna1;Target=comp160532_c0_seq1 1097 636 .
Chr2	stalkie_big_nohaplotig	CDS	37922101	37922232	.	+	0	Parent=comp160532_c0_seq1.mrna1
Chr2	gffcl	locus	37923534	37924219	.	-	.	ID=RLOC_00016570;geneIDs=comp150393_c0_seq1.path1;transcripts=comp150393_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37923534	37924219	.	-	.	ID=comp150393_c0_seq1.mrna1;geneID=comp150393_c0_seq1.path1;Name=comp150393_c0_seq1;Dir=indeterminatecoverage=95.6;identity=97.4;matches=671;mismatches=14;indels=4;unknowns=0;Target=comp150393_c0_seq1 705 18 .;CDS_Target=comp150393_c0_seq1 542 483 .;locus=RLOC_00016570
Chr2	stalkie_big_nohaplotig	exon	37923534	37924219	97	-	.	Parent=comp150393_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	37923697	37923756	.	-	0	Parent=comp150393_c0_seq1.mrna1
Chr2	gffcl	locus	37927410	37928545	.	+	.	ID=RLOC_00016571;geneIDs=comp153863_c0_seq1.path1;transcripts=comp153863_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37927410	37928545	.	+	.	ID=comp153863_c0_seq1.mrna1;geneID=comp153863_c0_seq1.path1;Name=comp153863_c0_seq1;Dir=antisensecoverage=99.7;identity=98.9;matches=1053;mismatches=9;indels=3;unknowns=0;locus=RLOC_00016571
Chr2	stalkie_big_nohaplotig	exon	37927410	37927545	98	+	.	Parent=comp153863_c0_seq1.mrna1;Target=comp153863_c0_seq1 930 1065 -
Chr2	stalkie_big_nohaplotig	exon	37927620	37928545	98	+	.	Parent=comp153863_c0_seq1.mrna1;Target=comp153863_c0_seq1 1 929 -
Chr2	stalkie_big_nohaplotig	CDS	37927507	37927545	.	+	0	Parent=comp153863_c0_seq1.mrna1;Target=comp153863_c0_seq1 930 968 .
Chr2	stalkie_big_nohaplotig	CDS	37927620	37927936	.	+	0	Parent=comp153863_c0_seq1.mrna1;Target=comp153863_c0_seq1 612 929 .
Chr2	gffcl	locus	37931009	38037592	.	-	.	ID=RLOC_00016572;geneIDs=FBgn0033741.1.path1,FBgn0033744.1.path1,comp147446_c0_seq1.path1,comp159498_c0_seq1.path1;transcripts=comp159498_c0_seq1.mrna1,FBgn0033744.1.mrna1,FBgn0033741.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	37931857	38036415	.	-	.	ID=comp159498_c0_seq1.mrna1;geneID=comp159498_c0_seq1.path1;Name=comp159498_c0_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=3658;mismatches=22;indels=3;unknowns=0;locus=RLOC_00016572
Chr2	stalkie_big_nohaplotig	exon	37931857	37933646	98	-	.	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 1 1792 -
Chr2	stalkie_big_nohaplotig	exon	37935682	37935732	100	-	.	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 1793 1843 -
Chr2	stalkie_big_nohaplotig	exon	37960471	37960595	100	-	.	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 1844 1968 -
Chr2	stalkie_big_nohaplotig	exon	37960664	37960849	100	-	.	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 1969 2154 -
Chr2	stalkie_big_nohaplotig	exon	37962023	37962133	100	-	.	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 2155 2265 -
Chr2	stalkie_big_nohaplotig	exon	37969025	37969104	100	-	.	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 2266 2345 -
Chr2	stalkie_big_nohaplotig	exon	37970899	37970979	100	-	.	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 2346 2426 -
Chr2	stalkie_big_nohaplotig	exon	37973525	37973618	100	-	.	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 2427 2520 -
Chr2	stalkie_big_nohaplotig	exon	37973703	37973799	100	-	.	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 2521 2617 -
Chr2	stalkie_big_nohaplotig	exon	37974037	37974232	100	-	.	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 2618 2813 -
Chr2	stalkie_big_nohaplotig	exon	37980707	37980833	100	-	.	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 2814 2940 -
Chr2	stalkie_big_nohaplotig	exon	37983543	37984136	99	-	.	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 2941 3535 -
Chr2	stalkie_big_nohaplotig	exon	38032567	38032693	100	-	.	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 3536 3662 -
Chr2	stalkie_big_nohaplotig	exon	38036395	38036415	100	-	.	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 3663 3683 -
Chr2	stalkie_big_nohaplotig	CDS	37933604	37933646	.	-	1	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 1750 1792 .
Chr2	stalkie_big_nohaplotig	CDS	37935682	37935732	.	-	1	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 1793 1843 .
Chr2	stalkie_big_nohaplotig	CDS	37960471	37960595	.	-	0	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 1844 1968 .
Chr2	stalkie_big_nohaplotig	CDS	37960664	37960849	.	-	0	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 1969 2154 .
Chr2	stalkie_big_nohaplotig	CDS	37962023	37962133	.	-	0	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 2155 2265 .
Chr2	stalkie_big_nohaplotig	CDS	37969025	37969104	.	-	2	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 2266 2345 .
Chr2	stalkie_big_nohaplotig	CDS	37970899	37970979	.	-	2	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 2346 2426 .
Chr2	stalkie_big_nohaplotig	CDS	37973525	37973618	.	-	0	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 2427 2520 .
Chr2	stalkie_big_nohaplotig	CDS	37973703	37973799	.	-	1	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 2521 2617 .
Chr2	stalkie_big_nohaplotig	CDS	37974037	37974232	.	-	2	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 2618 2813 .
Chr2	stalkie_big_nohaplotig	CDS	37980707	37980833	.	-	0	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 2814 2940 .
Chr2	stalkie_big_nohaplotig	CDS	37983543	37983809	.	-	0	Parent=comp159498_c0_seq1.mrna1;Target=comp159498_c0_seq1 2941 3207 .
Chr2	stalkie_big_nohaplotig	mRNA	37956567	37983872	.	-	.	ID=FBgn0033744.1.mrna1;geneID=FBgn0033744.1.path1;Name=FBgn0033744.1;Dir=sensecoverage=100.0;identity=100.0;matches=1518;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016572
Chr2	stalkie_big_nohaplotig	exon	37956567	37956606	100	-	.	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 1479 1518 +
Chr2	stalkie_big_nohaplotig	exon	37958597	37958647	100	-	.	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 1428 1478 +
Chr2	stalkie_big_nohaplotig	exon	37960471	37960595	100	-	.	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 1303 1427 +
Chr2	stalkie_big_nohaplotig	exon	37960664	37960849	100	-	.	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 1117 1302 +
Chr2	stalkie_big_nohaplotig	exon	37962023	37962133	100	-	.	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 1006 1116 +
Chr2	stalkie_big_nohaplotig	exon	37969025	37969104	100	-	.	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 926 1005 +
Chr2	stalkie_big_nohaplotig	exon	37970899	37970979	100	-	.	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 845 925 +
Chr2	stalkie_big_nohaplotig	exon	37973525	37973618	100	-	.	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 751 844 +
Chr2	stalkie_big_nohaplotig	exon	37973703	37973799	100	-	.	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 654 750 +
Chr2	stalkie_big_nohaplotig	exon	37974037	37974232	100	-	.	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 458 653 +
Chr2	stalkie_big_nohaplotig	exon	37980707	37980833	100	-	.	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 331 457 +
Chr2	stalkie_big_nohaplotig	exon	37983543	37983872	100	-	.	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 1 330 +
Chr2	stalkie_big_nohaplotig	CDS	37956567	37956606	.	-	1	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 1479 1518 +
Chr2	stalkie_big_nohaplotig	CDS	37958597	37958647	.	-	1	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 1428 1478 +
Chr2	stalkie_big_nohaplotig	CDS	37960471	37960595	.	-	0	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 1303 1427 +
Chr2	stalkie_big_nohaplotig	CDS	37960664	37960849	.	-	0	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 1117 1302 +
Chr2	stalkie_big_nohaplotig	CDS	37962023	37962133	.	-	0	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 1006 1116 +
Chr2	stalkie_big_nohaplotig	CDS	37969025	37969104	.	-	2	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 926 1005 +
Chr2	stalkie_big_nohaplotig	CDS	37970899	37970979	.	-	2	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 845 925 +
Chr2	stalkie_big_nohaplotig	CDS	37973525	37973618	.	-	0	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 751 844 +
Chr2	stalkie_big_nohaplotig	CDS	37973703	37973799	.	-	1	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 654 750 +
Chr2	stalkie_big_nohaplotig	CDS	37974037	37974232	.	-	2	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 458 653 +
Chr2	stalkie_big_nohaplotig	CDS	37980707	37980833	.	-	0	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 331 457 +
Chr2	stalkie_big_nohaplotig	CDS	37983543	37983872	.	-	0	Parent=FBgn0033744.1.mrna1;Target=FBgn0033744.1 1 330 +
Chr2	stalkie_big_nohaplotig	mRNA	38034162	38037592	.	-	.	ID=FBgn0033741.1.mrna1;geneID=FBgn0033741.1.path1;Name=FBgn0033741.1;Dir=sensecoverage=100.0;identity=98.6;matches=2614;mismatches=8;indels=30;unknowns=0;locus=RLOC_00016572
Chr2	stalkie_big_nohaplotig	exon	38034162	38035649	99	-	.	Parent=FBgn0033741.1.mrna1;Target=FBgn0033741.1 1165 2652 +
Chr2	stalkie_big_nohaplotig	exon	38036395	38037416	96	-	.	Parent=FBgn0033741.1.mrna1;Target=FBgn0033741.1 113 1164 +
Chr2	stalkie_big_nohaplotig	exon	38037481	38037592	100	-	.	Parent=FBgn0033741.1.mrna1;Target=FBgn0033741.1 1 112 +
Chr2	stalkie_big_nohaplotig	CDS	38034162	38035649	.	-	0	Parent=FBgn0033741.1.mrna1;Target=FBgn0033741.1 1165 2652 +
Chr2	stalkie_big_nohaplotig	CDS	38036395	38037416	.	-	2	Parent=FBgn0033741.1.mrna1;Target=FBgn0033741.1 113 1164 +
Chr2	stalkie_big_nohaplotig	CDS	38037481	38037592	.	-	0	Parent=FBgn0033741.1.mrna1;Target=FBgn0033741.1 1 112 +
Chr2	gffcl	locus	37992270	37992326	.	+	.	ID=RLOC_00016573;geneIDs=comp152821_c1_seq1.path2;transcripts=comp152821_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	37992270	37992326	.	+	.	ID=comp152821_c1_seq1.mrna2;geneID=comp152821_c1_seq1.path2;Name=comp152821_c1_seq1;Dir=indeterminatecoverage=6.8;identity=96.5;matches=55;mismatches=2;indels=0;unknowns=0;Target=comp152821_c1_seq1 837 781 .;locus=RLOC_00016573
Chr2	stalkie_big_nohaplotig	exon	37992270	37992326	96	+	.	Parent=comp152821_c1_seq1.mrna2
Chr2	gffcl	locus	38028499	38030538	.	-	.	ID=RLOC_00016575;geneIDs=FBgn0033742.1.path1;transcripts=FBgn0033742.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38028499	38030538	.	-	.	ID=FBgn0033742.1.mrna1;geneID=FBgn0033742.1.path1;Name=FBgn0033742.1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=2000;mismatches=40;indels=0;unknowns=0;Target=FBgn0033742.1 2040 1 .;locus=RLOC_00016575
Chr2	stalkie_big_nohaplotig	exon	38028499	38030538	98	-	.	Parent=FBgn0033742.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38028499	38030538	.	-	0	Parent=FBgn0033742.1.mrna1
Chr2	gffcl	locus	38038090	38040160	.	+	.	ID=RLOC_00016576;geneIDs=FBgn0020930.1.path1;transcripts=FBgn0020930.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38038090	38040160	.	+	.	ID=FBgn0020930.1.mrna1;geneID=FBgn0020930.1.path1;Name=FBgn0020930.1;Dir=sensecoverage=100.0;identity=99.8;matches=1661;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016576
Chr2	stalkie_big_nohaplotig	exon	38038090	38038296	100	+	.	Parent=FBgn0020930.1.mrna1;Target=FBgn0020930.1 1 207 +
Chr2	stalkie_big_nohaplotig	exon	38038360	38039040	99	+	.	Parent=FBgn0020930.1.mrna1;Target=FBgn0020930.1 208 888 +
Chr2	stalkie_big_nohaplotig	exon	38039105	38039215	99	+	.	Parent=FBgn0020930.1.mrna1;Target=FBgn0020930.1 889 999 +
Chr2	stalkie_big_nohaplotig	exon	38039280	38039486	99	+	.	Parent=FBgn0020930.1.mrna1;Target=FBgn0020930.1 1000 1206 +
Chr2	stalkie_big_nohaplotig	exon	38039555	38039720	100	+	.	Parent=FBgn0020930.1.mrna1;Target=FBgn0020930.1 1207 1372 +
Chr2	stalkie_big_nohaplotig	exon	38039798	38039949	99	+	.	Parent=FBgn0020930.1.mrna1;Target=FBgn0020930.1 1373 1524 +
Chr2	stalkie_big_nohaplotig	exon	38040020	38040160	100	+	.	Parent=FBgn0020930.1.mrna1;Target=FBgn0020930.1 1525 1665 +
Chr2	stalkie_big_nohaplotig	CDS	38038090	38038296	.	+	0	Parent=FBgn0020930.1.mrna1;Target=FBgn0020930.1 1 207 +
Chr2	stalkie_big_nohaplotig	CDS	38038360	38039040	.	+	0	Parent=FBgn0020930.1.mrna1;Target=FBgn0020930.1 208 888 +
Chr2	stalkie_big_nohaplotig	CDS	38039105	38039215	.	+	0	Parent=FBgn0020930.1.mrna1;Target=FBgn0020930.1 889 999 +
Chr2	stalkie_big_nohaplotig	CDS	38039280	38039486	.	+	0	Parent=FBgn0020930.1.mrna1;Target=FBgn0020930.1 1000 1206 +
Chr2	stalkie_big_nohaplotig	CDS	38039555	38039720	.	+	0	Parent=FBgn0020930.1.mrna1;Target=FBgn0020930.1 1207 1372 +
Chr2	stalkie_big_nohaplotig	CDS	38039798	38039949	.	+	2	Parent=FBgn0020930.1.mrna1;Target=FBgn0020930.1 1373 1524 +
Chr2	stalkie_big_nohaplotig	CDS	38040020	38040160	.	+	0	Parent=FBgn0020930.1.mrna1;Target=FBgn0020930.1 1525 1665 +
Chr2	gffcl	locus	38045067	38045753	.	-	.	ID=RLOC_00016577;geneIDs=FBgn0086904.2.path1;transcripts=FBgn0086904.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38045067	38045753	.	-	.	ID=FBgn0086904.2.mrna1;geneID=FBgn0086904.2.path1;Name=FBgn0086904.2;Dir=indeterminatecoverage=100.0;identity=99.6;matches=684;mismatches=3;indels=0;unknowns=0;Target=FBgn0086904.2 687 1 .;locus=RLOC_00016577
Chr2	stalkie_big_nohaplotig	exon	38045067	38045753	99	-	.	Parent=FBgn0086904.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38045067	38045753	.	-	0	Parent=FBgn0086904.2.mrna1
Chr2	gffcl	locus	38079824	38080615	.	+	.	ID=RLOC_00016578;geneIDs=ORF2886.path1;transcripts=ORF2886.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38079824	38080615	.	+	.	ID=ORF2886.mrna1;geneID=ORF2886.path1;Name=ORF2886;Dir=indeterminatecoverage=100.0;identity=99.9;matches=791;mismatches=1;indels=0;unknowns=0;Target=ORF2886 792 1 .;locus=RLOC_00016578
Chr2	stalkie_big_nohaplotig	exon	38079824	38080615	99	+	.	Parent=ORF2886.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38079824	38080615	.	+	0	Parent=ORF2886.mrna1
Chr2	gffcl	locus	38082719	38085768	.	+	.	ID=RLOC_00016579;geneIDs=Dp_FBgn0245981.1.path1;transcripts=Dp_FBgn0245981.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38082719	38085768	.	+	.	ID=Dp_FBgn0245981.1.mrna1;geneID=Dp_FBgn0245981.1.path1;Name=Dp_FBgn0245981.1;Dir=sensecoverage=100.0;identity=100.0;matches=573;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016579
Chr2	stalkie_big_nohaplotig	exon	38082719	38082911	100	+	.	Parent=Dp_FBgn0245981.1.mrna1;Target=Dp_FBgn0245981.1 1 193 +
Chr2	stalkie_big_nohaplotig	exon	38083095	38083413	100	+	.	Parent=Dp_FBgn0245981.1.mrna1;Target=Dp_FBgn0245981.1 194 512 +
Chr2	stalkie_big_nohaplotig	exon	38085708	38085768	100	+	.	Parent=Dp_FBgn0245981.1.mrna1;Target=Dp_FBgn0245981.1 513 573 +
Chr2	stalkie_big_nohaplotig	CDS	38082719	38082911	.	+	0	Parent=Dp_FBgn0245981.1.mrna1;Target=Dp_FBgn0245981.1 1 193 +
Chr2	stalkie_big_nohaplotig	CDS	38083095	38083413	.	+	2	Parent=Dp_FBgn0245981.1.mrna1;Target=Dp_FBgn0245981.1 194 512 +
Chr2	stalkie_big_nohaplotig	CDS	38085708	38085768	.	+	1	Parent=Dp_FBgn0245981.1.mrna1;Target=Dp_FBgn0245981.1 513 573 +
Chr2	gffcl	locus	38089418	38096151	.	-	.	ID=RLOC_00016580;geneIDs=Dv_FBgn0207554.1.path1;transcripts=Dv_FBgn0207554.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38089418	38096151	.	-	.	ID=Dv_FBgn0207554.1.mrna1;geneID=Dv_FBgn0207554.1.path1;Name=Dv_FBgn0207554.1;Dir=sensecoverage=100.0;identity=99.1;matches=1392;mismatches=12;indels=0;unknowns=0;locus=RLOC_00016580
Chr2	stalkie_big_nohaplotig	exon	38089418	38089567	100	-	.	Parent=Dv_FBgn0207554.1.mrna1;Target=Dv_FBgn0207554.1 1255 1404 +
Chr2	stalkie_big_nohaplotig	exon	38090460	38091691	99	-	.	Parent=Dv_FBgn0207554.1.mrna1;Target=Dv_FBgn0207554.1 23 1254 +
Chr2	stalkie_big_nohaplotig	exon	38096130	38096151	100	-	.	Parent=Dv_FBgn0207554.1.mrna1;Target=Dv_FBgn0207554.1 1 22 +
Chr2	stalkie_big_nohaplotig	CDS	38089418	38089567	.	-	0	Parent=Dv_FBgn0207554.1.mrna1;Target=Dv_FBgn0207554.1 1255 1404 +
Chr2	stalkie_big_nohaplotig	CDS	38090460	38091691	.	-	2	Parent=Dv_FBgn0207554.1.mrna1;Target=Dv_FBgn0207554.1 23 1254 +
Chr2	stalkie_big_nohaplotig	CDS	38096130	38096151	.	-	0	Parent=Dv_FBgn0207554.1.mrna1;Target=Dv_FBgn0207554.1 1 22 +
Chr2	gffcl	locus	38092721	38095868	.	-	.	ID=RLOC_00016581;geneIDs=FBgn0033005.1.path1;transcripts=FBgn0033005.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38092721	38095868	.	-	.	ID=FBgn0033005.1.mrna1;geneID=FBgn0033005.1.path1;Name=FBgn0033005.1;Dir=sensecoverage=100.0;identity=99.6;matches=3081;mismatches=12;indels=0;unknowns=0;locus=RLOC_00016581
Chr2	stalkie_big_nohaplotig	exon	38092721	38095244	99	-	.	Parent=FBgn0033005.1.mrna1;Target=FBgn0033005.1 570 3093 +
Chr2	stalkie_big_nohaplotig	exon	38095300	38095868	100	-	.	Parent=FBgn0033005.1.mrna1;Target=FBgn0033005.1 1 569 +
Chr2	stalkie_big_nohaplotig	CDS	38092721	38095244	.	-	1	Parent=FBgn0033005.1.mrna1;Target=FBgn0033005.1 570 3093 +
Chr2	stalkie_big_nohaplotig	CDS	38095300	38095868	.	-	0	Parent=FBgn0033005.1.mrna1;Target=FBgn0033005.1 1 569 +
Chr2	gffcl	locus	38097461	38098354	.	+	.	ID=RLOC_00016582;geneIDs=comp146720_c0_seq1.path1;transcripts=comp146720_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38097461	38098354	.	+	.	ID=comp146720_c0_seq1.mrna1;geneID=comp146720_c0_seq1.path1;Name=comp146720_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=880;mismatches=9;indels=5;unknowns=0;Target=comp146720_c0_seq1 889 1 .;CDS_Target=comp146720_c0_seq1 590 189 .;locus=RLOC_00016582
Chr2	stalkie_big_nohaplotig	exon	38097461	38098354	98	+	.	Parent=comp146720_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38097654	38098055	.	+	0	Parent=comp146720_c0_seq1.mrna1
Chr2	gffcl	locus	38101980	38104921	.	+	.	ID=RLOC_00016583;geneIDs=FBgn0015037.1.path1;transcripts=FBgn0015037.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38101980	38104921	.	+	.	ID=FBgn0015037.1.mrna1;geneID=FBgn0015037.1.path1;Name=FBgn0015037.1;Dir=sensecoverage=99.9;identity=99.6;matches=1586;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016583
Chr2	stalkie_big_nohaplotig	exon	38101980	38102201	99	+	.	Parent=FBgn0015037.1.mrna1;Target=FBgn0015037.1 2 223 +
Chr2	stalkie_big_nohaplotig	exon	38102269	38102469	99	+	.	Parent=FBgn0015037.1.mrna1;Target=FBgn0015037.1 224 424 +
Chr2	stalkie_big_nohaplotig	exon	38102663	38102744	100	+	.	Parent=FBgn0015037.1.mrna1;Target=FBgn0015037.1 425 506 +
Chr2	stalkie_big_nohaplotig	exon	38102833	38102945	96	+	.	Parent=FBgn0015037.1.mrna1;Target=FBgn0015037.1 507 619 +
Chr2	stalkie_big_nohaplotig	exon	38103002	38103275	100	+	.	Parent=FBgn0015037.1.mrna1;Target=FBgn0015037.1 620 893 +
Chr2	stalkie_big_nohaplotig	exon	38104162	38104382	100	+	.	Parent=FBgn0015037.1.mrna1;Target=FBgn0015037.1 894 1114 +
Chr2	stalkie_big_nohaplotig	exon	38104443	38104921	100	+	.	Parent=FBgn0015037.1.mrna1;Target=FBgn0015037.1 1115 1593 +
Chr2	stalkie_big_nohaplotig	CDS	38101982	38102201	.	+	0	Parent=FBgn0015037.1.mrna1;Target=FBgn0015037.1 4 223 +
Chr2	stalkie_big_nohaplotig	CDS	38102269	38102469	.	+	2	Parent=FBgn0015037.1.mrna1;Target=FBgn0015037.1 224 424 +
Chr2	stalkie_big_nohaplotig	CDS	38102663	38102744	.	+	2	Parent=FBgn0015037.1.mrna1;Target=FBgn0015037.1 425 506 +
Chr2	stalkie_big_nohaplotig	CDS	38102833	38102945	.	+	1	Parent=FBgn0015037.1.mrna1;Target=FBgn0015037.1 507 619 +
Chr2	stalkie_big_nohaplotig	CDS	38103002	38103275	.	+	2	Parent=FBgn0015037.1.mrna1;Target=FBgn0015037.1 620 893 +
Chr2	stalkie_big_nohaplotig	CDS	38104162	38104382	.	+	1	Parent=FBgn0015037.1.mrna1;Target=FBgn0015037.1 894 1114 +
Chr2	stalkie_big_nohaplotig	CDS	38104443	38104921	.	+	2	Parent=FBgn0015037.1.mrna1;Target=FBgn0015037.1 1115 1593 +
Chr2	gffcl	locus	38105229	38105804	.	+	.	ID=RLOC_00016584;geneIDs=comp155536_c0_seq1.path1;transcripts=comp155536_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38105229	38105804	.	+	.	ID=comp155536_c0_seq1.mrna1;geneID=comp155536_c0_seq1.path1;Name=comp155536_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.1;matches=569;mismatches=7;indels=16;unknowns=0;Target=comp155536_c0_seq1 592 1 .;CDS_Target=comp155536_c0_seq1 337 173 .;locus=RLOC_00016584
Chr2	stalkie_big_nohaplotig	exon	38105229	38105804	96	+	.	Parent=comp155536_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38105401	38105565	.	+	0	Parent=comp155536_c0_seq1.mrna1
Chr2	gffcl	locus	38123381	38123609	.	-	.	ID=RLOC_00016585;geneIDs=comp3058_c0_seq1.path1;transcripts=comp3058_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38123381	38123609	.	-	.	ID=comp3058_c0_seq1.mrna1;geneID=comp3058_c0_seq1.path1;Name=comp3058_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=229;mismatches=0;indels=0;unknowns=0;Target=comp3058_c0_seq1 229 1 .;CDS_Target=comp3058_c0_seq1 122 27 .;locus=RLOC_00016585
Chr2	stalkie_big_nohaplotig	exon	38123381	38123609	100	-	.	Parent=comp3058_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38123488	38123583	.	-	0	Parent=comp3058_c0_seq1.mrna1
Chr2	gffcl	locus	38126307	38147442	.	+	.	ID=RLOC_00016586;geneIDs=FBgn0034366.1.path1,comp162152_c0_seq1.path1;transcripts=comp162152_c0_seq1.mrna1,FBgn0034366.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38126307	38147442	.	+	.	ID=comp162152_c0_seq1.mrna1;geneID=comp162152_c0_seq1.path1;Name=comp162152_c0_seq1;Dir=antisensecoverage=51.7;identity=95.2;matches=2792;mismatches=42;indels=99;unknowns=60;locus=RLOC_00016586
Chr2	stalkie_big_nohaplotig	exon	38126307	38126554	98	+	.	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 5722 5968 -
Chr2	stalkie_big_nohaplotig	exon	38126615	38126824	98	+	.	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 5512 5721 -
Chr2	stalkie_big_nohaplotig	exon	38127005	38127200	100	+	.	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 5316 5511 -
Chr2	stalkie_big_nohaplotig	exon	38127270	38127604	98	+	.	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 4981 5315 -
Chr2	stalkie_big_nohaplotig	exon	38128057	38128269	99	+	.	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 4768 4980 -
Chr2	stalkie_big_nohaplotig	exon	38128340	38128351	100	+	.	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 4756 4767 -
Chr2	stalkie_big_nohaplotig	exon	38128391	38128515	100	+	.	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 4464 4588 -
Chr2	stalkie_big_nohaplotig	exon	38128575	38128763	100	+	.	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 4275 4463 -
Chr2	stalkie_big_nohaplotig	exon	38128820	38128996	100	+	.	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 4098 4274 -
Chr2	stalkie_big_nohaplotig	exon	38136303	38136587	99	+	.	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 3813 4097 -
Chr2	stalkie_big_nohaplotig	exon	38136661	38136777	100	+	.	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 3696 3812 -
Chr2	stalkie_big_nohaplotig	exon	38136835	38137535	94	+	.	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 2972 3695 -
Chr2	stalkie_big_nohaplotig	exon	38145699	38145704	100	+	.	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 2966 2971 -
Chr2	stalkie_big_nohaplotig	exon	38146275	38146285	81	+	.	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 2955 2965 -
Chr2	stalkie_big_nohaplotig	exon	38146392	38146397	100	+	.	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 2949 2954 -
Chr2	stalkie_big_nohaplotig	exon	38146517	38146556	25	+	.	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 2939 2948 -
Chr2	stalkie_big_nohaplotig	exon	38146635	38146642	87	+	.	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 2931 2938 -
Chr2	stalkie_big_nohaplotig	exon	38146743	38146774	31	+	.	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 2917 2930 -
Chr2	stalkie_big_nohaplotig	exon	38146870	38146880	81	+	.	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 2907 2916 -
Chr2	stalkie_big_nohaplotig	exon	38146957	38146961	80	+	.	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 2902 2906 -
Chr2	stalkie_big_nohaplotig	exon	38147400	38147442	34	+	.	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 2885 2901 -
Chr2	stalkie_big_nohaplotig	CDS	38126616	38126824	.	+	0	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 5512 5720 .
Chr2	stalkie_big_nohaplotig	CDS	38127005	38127200	.	+	1	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 5316 5511 .
Chr2	stalkie_big_nohaplotig	CDS	38127270	38127604	.	+	0	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 4981 5315 .
Chr2	stalkie_big_nohaplotig	CDS	38128057	38128269	.	+	1	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 4768 4980 .
Chr2	stalkie_big_nohaplotig	CDS	38128340	38128351	.	+	1	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 4756 4767 .
Chr2	stalkie_big_nohaplotig	CDS	38128391	38128515	.	+	1	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 4464 4588 .
Chr2	stalkie_big_nohaplotig	CDS	38128575	38128763	.	+	2	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 4275 4463 .
Chr2	stalkie_big_nohaplotig	CDS	38128820	38128996	.	+	2	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 4098 4274 .
Chr2	stalkie_big_nohaplotig	CDS	38136303	38136587	.	+	2	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 3813 4097 .
Chr2	stalkie_big_nohaplotig	CDS	38136661	38136777	.	+	2	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 3696 3812 .
Chr2	stalkie_big_nohaplotig	CDS	38136835	38136879	.	+	2	Parent=comp162152_c0_seq1.mrna1;Target=comp162152_c0_seq1 3651 3695 .
Chr2	stalkie_big_nohaplotig	mRNA	38126613	38136876	.	+	.	ID=FBgn0034366.1.mrna1;geneID=FBgn0034366.1.path1;Name=FBgn0034366.1;Dir=sensecoverage=100.0;identity=99.4;matches=1832;mismatches=11;indels=0;unknowns=63;locus=RLOC_00016586
Chr2	stalkie_big_nohaplotig	exon	38126613	38126824	98	+	.	Parent=FBgn0034366.1.mrna1;Target=FBgn0034366.1 1 212 +
Chr2	stalkie_big_nohaplotig	exon	38127005	38127200	100	+	.	Parent=FBgn0034366.1.mrna1;Target=FBgn0034366.1 213 408 +
Chr2	stalkie_big_nohaplotig	exon	38127270	38127604	98	+	.	Parent=FBgn0034366.1.mrna1;Target=FBgn0034366.1 409 743 +
Chr2	stalkie_big_nohaplotig	exon	38128057	38128269	99	+	.	Parent=FBgn0034366.1.mrna1;Target=FBgn0034366.1 744 956 +
Chr2	stalkie_big_nohaplotig	exon	38128340	38128351	100	+	.	Parent=FBgn0034366.1.mrna1;Target=FBgn0034366.1 957 968 +
Chr2	stalkie_big_nohaplotig	exon	38128388	38128515	100	+	.	Parent=FBgn0034366.1.mrna1;Target=FBgn0034366.1 1133 1260 +
Chr2	stalkie_big_nohaplotig	exon	38128575	38128763	100	+	.	Parent=FBgn0034366.1.mrna1;Target=FBgn0034366.1 1261 1449 +
Chr2	stalkie_big_nohaplotig	exon	38128820	38128996	100	+	.	Parent=FBgn0034366.1.mrna1;Target=FBgn0034366.1 1450 1626 +
Chr2	stalkie_big_nohaplotig	exon	38136303	38136587	99	+	.	Parent=FBgn0034366.1.mrna1;Target=FBgn0034366.1 1627 1911 +
Chr2	stalkie_big_nohaplotig	exon	38136661	38136777	100	+	.	Parent=FBgn0034366.1.mrna1;Target=FBgn0034366.1 1912 2028 +
Chr2	stalkie_big_nohaplotig	exon	38136835	38136876	100	+	.	Parent=FBgn0034366.1.mrna1;Target=FBgn0034366.1 2029 2070 +
Chr2	stalkie_big_nohaplotig	CDS	38126613	38126824	.	+	0	Parent=FBgn0034366.1.mrna1;Target=FBgn0034366.1 1 212 +
Chr2	stalkie_big_nohaplotig	CDS	38127005	38127200	.	+	1	Parent=FBgn0034366.1.mrna1;Target=FBgn0034366.1 213 408 +
Chr2	stalkie_big_nohaplotig	CDS	38127270	38127604	.	+	0	Parent=FBgn0034366.1.mrna1;Target=FBgn0034366.1 409 743 +
Chr2	stalkie_big_nohaplotig	CDS	38128057	38128269	.	+	1	Parent=FBgn0034366.1.mrna1;Target=FBgn0034366.1 744 956 +
Chr2	stalkie_big_nohaplotig	CDS	38128340	38128351	.	+	1	Parent=FBgn0034366.1.mrna1;Target=FBgn0034366.1 957 968 +
Chr2	stalkie_big_nohaplotig	CDS	38128388	38128515	.	+	1	Parent=FBgn0034366.1.mrna1;Target=FBgn0034366.1 1133 1260 +
Chr2	stalkie_big_nohaplotig	CDS	38128575	38128763	.	+	2	Parent=FBgn0034366.1.mrna1;Target=FBgn0034366.1 1261 1449 +
Chr2	stalkie_big_nohaplotig	CDS	38128820	38128996	.	+	2	Parent=FBgn0034366.1.mrna1;Target=FBgn0034366.1 1450 1626 +
Chr2	stalkie_big_nohaplotig	CDS	38136303	38136587	.	+	2	Parent=FBgn0034366.1.mrna1;Target=FBgn0034366.1 1627 1911 +
Chr2	stalkie_big_nohaplotig	CDS	38136661	38136777	.	+	2	Parent=FBgn0034366.1.mrna1;Target=FBgn0034366.1 1912 2028 +
Chr2	stalkie_big_nohaplotig	CDS	38136835	38136876	.	+	2	Parent=FBgn0034366.1.mrna1;Target=FBgn0034366.1 2029 2070 +
Chr2	gffcl	locus	38129101	38133222	.	-	.	ID=RLOC_00016587;geneIDs=FBgn0034365.1.path1;transcripts=FBgn0034365.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38129101	38133222	.	-	.	ID=FBgn0034365.1.mrna1;geneID=FBgn0034365.1.path1;Name=FBgn0034365.1;Dir=sensecoverage=100.0;identity=99.5;matches=961;mismatches=5;indels=0;unknowns=0;locus=RLOC_00016587
Chr2	stalkie_big_nohaplotig	exon	38129101	38129383	100	-	.	Parent=FBgn0034365.1.mrna1;Target=FBgn0034365.1 684 966 +
Chr2	stalkie_big_nohaplotig	exon	38129444	38130031	99	-	.	Parent=FBgn0034365.1.mrna1;Target=FBgn0034365.1 96 683 +
Chr2	stalkie_big_nohaplotig	exon	38133128	38133222	97	-	.	Parent=FBgn0034365.1.mrna1;Target=FBgn0034365.1 1 95 +
Chr2	stalkie_big_nohaplotig	CDS	38129101	38129383	.	-	1	Parent=FBgn0034365.1.mrna1;Target=FBgn0034365.1 684 966 +
Chr2	stalkie_big_nohaplotig	CDS	38129444	38130031	.	-	1	Parent=FBgn0034365.1.mrna1;Target=FBgn0034365.1 96 683 +
Chr2	stalkie_big_nohaplotig	CDS	38133128	38133222	.	-	0	Parent=FBgn0034365.1.mrna1;Target=FBgn0034365.1 1 95 +
Chr2	gffcl	locus	38131516	38132206	.	+	.	ID=RLOC_00016588;geneIDs=comp154546_c0_seq1.path1;transcripts=comp154546_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38131516	38132206	.	+	.	ID=comp154546_c0_seq1.mrna1;geneID=comp154546_c0_seq1.path1;Name=comp154546_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=676;mismatches=13;indels=2;unknowns=0;Target=comp154546_c0_seq1 689 1 .;CDS_Target=comp154546_c0_seq1 27 1 .;locus=RLOC_00016588
Chr2	stalkie_big_nohaplotig	exon	38131516	38132206	97	+	.	Parent=comp154546_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38131516	38131542	.	+	0	Parent=comp154546_c0_seq1.mrna1
Chr2	gffcl	locus	38152094	38152929	.	+	.	ID=RLOC_00016589;geneIDs=FBgn0034364.1.path1;transcripts=FBgn0034364.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38152094	38152929	.	+	.	ID=FBgn0034364.1.mrna1;geneID=FBgn0034364.1.path1;Name=FBgn0034364.1;Dir=sensecoverage=98.6;identity=99.0;matches=761;mismatches=5;indels=3;unknowns=0;locus=RLOC_00016589
Chr2	stalkie_big_nohaplotig	exon	38152094	38152686	98	+	.	Parent=FBgn0034364.1.mrna1;Target=FBgn0034364.1 12 601 +
Chr2	stalkie_big_nohaplotig	exon	38152754	38152929	99	+	.	Parent=FBgn0034364.1.mrna1;Target=FBgn0034364.1 602 777 +
Chr2	stalkie_big_nohaplotig	CDS	38152095	38152686	.	+	0	Parent=FBgn0034364.1.mrna1;Target=FBgn0034364.1 13 601 +
Chr2	stalkie_big_nohaplotig	CDS	38152754	38152929	.	+	2	Parent=FBgn0034364.1.mrna1;Target=FBgn0034364.1 602 777 +
Chr2	gffcl	locus	38153857	38155713	.	-	.	ID=RLOC_00016590;geneIDs=FBgn0034362.2.path1;transcripts=FBgn0034362.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38153857	38155713	.	-	.	ID=FBgn0034362.2.mrna1;geneID=FBgn0034362.2.path1;Name=FBgn0034362.2;Dir=sensecoverage=98.9;identity=99.6;matches=556;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016590
Chr2	stalkie_big_nohaplotig	exon	38153857	38154042	99	-	.	Parent=FBgn0034362.2.mrna1;Target=FBgn0034362.2 379 564 +
Chr2	stalkie_big_nohaplotig	exon	38155284	38155448	100	-	.	Parent=FBgn0034362.2.mrna1;Target=FBgn0034362.2 214 378 +
Chr2	stalkie_big_nohaplotig	exon	38155507	38155713	99	-	.	Parent=FBgn0034362.2.mrna1;Target=FBgn0034362.2 7 213 +
Chr2	stalkie_big_nohaplotig	CDS	38153857	38154042	.	-	0	Parent=FBgn0034362.2.mrna1;Target=FBgn0034362.2 379 564 +
Chr2	stalkie_big_nohaplotig	CDS	38155284	38155448	.	-	0	Parent=FBgn0034362.2.mrna1;Target=FBgn0034362.2 214 378 +
Chr2	stalkie_big_nohaplotig	CDS	38155507	38155713	.	-	0	Parent=FBgn0034362.2.mrna1;Target=FBgn0034362.2 7 213 +
Chr2	gffcl	locus	38155816	38156413	.	-	.	ID=RLOC_00016591;geneIDs=FBgn0034362.1.path1;transcripts=FBgn0034362.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38155816	38156413	.	-	.	ID=FBgn0034362.1.mrna1;geneID=FBgn0034362.1.path1;Name=FBgn0034362.1;Dir=sensecoverage=100.0;identity=99.8;matches=458;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016591
Chr2	stalkie_big_nohaplotig	exon	38155816	38156001	100	-	.	Parent=FBgn0034362.1.mrna1;Target=FBgn0034362.1 274 459 +
Chr2	stalkie_big_nohaplotig	exon	38156077	38156241	99	-	.	Parent=FBgn0034362.1.mrna1;Target=FBgn0034362.1 109 273 +
Chr2	stalkie_big_nohaplotig	exon	38156306	38156413	100	-	.	Parent=FBgn0034362.1.mrna1;Target=FBgn0034362.1 1 108 +
Chr2	stalkie_big_nohaplotig	CDS	38155816	38156001	.	-	0	Parent=FBgn0034362.1.mrna1;Target=FBgn0034362.1 274 459 +
Chr2	stalkie_big_nohaplotig	CDS	38156077	38156241	.	-	0	Parent=FBgn0034362.1.mrna1;Target=FBgn0034362.1 109 273 +
Chr2	stalkie_big_nohaplotig	CDS	38156306	38156413	.	-	0	Parent=FBgn0034362.1.mrna1;Target=FBgn0034362.1 1 108 +
Chr2	gffcl	locus	38157782	38158448	.	+	.	ID=RLOC_00016592;geneIDs=FBgn0034361.1.path1;transcripts=FBgn0034361.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38157782	38158448	.	+	.	ID=FBgn0034361.1.mrna1;geneID=FBgn0034361.1.path1;Name=FBgn0034361.1;Dir=sensecoverage=100.0;identity=99.6;matches=553;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016592
Chr2	stalkie_big_nohaplotig	exon	38157782	38158051	99	+	.	Parent=FBgn0034361.1.mrna1;Target=FBgn0034361.1 1 270 +
Chr2	stalkie_big_nohaplotig	exon	38158106	38158227	100	+	.	Parent=FBgn0034361.1.mrna1;Target=FBgn0034361.1 271 392 +
Chr2	stalkie_big_nohaplotig	exon	38158286	38158448	99	+	.	Parent=FBgn0034361.1.mrna1;Target=FBgn0034361.1 393 555 +
Chr2	stalkie_big_nohaplotig	CDS	38157782	38158051	.	+	0	Parent=FBgn0034361.1.mrna1;Target=FBgn0034361.1 1 270 +
Chr2	stalkie_big_nohaplotig	CDS	38158106	38158227	.	+	0	Parent=FBgn0034361.1.mrna1;Target=FBgn0034361.1 271 392 +
Chr2	stalkie_big_nohaplotig	CDS	38158286	38158448	.	+	1	Parent=FBgn0034361.1.mrna1;Target=FBgn0034361.1 393 555 +
Chr2	gffcl	locus	38158668	38159804	.	-	.	ID=RLOC_00016593;geneIDs=FBgn0034360.1.path1;transcripts=FBgn0034360.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38158668	38159804	.	-	.	ID=FBgn0034360.1.mrna1;geneID=FBgn0034360.1.path1;Name=FBgn0034360.1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1127;mismatches=10;indels=0;unknowns=0;Target=FBgn0034360.1 1137 1 .;locus=RLOC_00016593
Chr2	stalkie_big_nohaplotig	exon	38158668	38159804	99	-	.	Parent=FBgn0034360.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38158668	38159804	.	-	0	Parent=FBgn0034360.1.mrna1
Chr2	gffcl	locus	38188620	38192280	.	+	.	ID=RLOC_00016594;geneIDs=ORF119.path1;transcripts=ORF119.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38188620	38192280	.	+	.	ID=ORF119.mrna1;geneID=ORF119.path1;Name=ORF119;Dir=sensecoverage=83.1;identity=95.5;matches=2377;mismatches=105;indels=6;unknowns=0;locus=RLOC_00016594
Chr2	stalkie_big_nohaplotig	exon	38188620	38188765	100	+	.	Parent=ORF119.mrna1;Target=ORF119 1 146 +
Chr2	stalkie_big_nohaplotig	exon	38188830	38189210	99	+	.	Parent=ORF119.mrna1;Target=ORF119 147 527 +
Chr2	stalkie_big_nohaplotig	exon	38189277	38189324	95	+	.	Parent=ORF119.mrna1;Target=ORF119 528 575 +
Chr2	stalkie_big_nohaplotig	exon	38189386	38189717	98	+	.	Parent=ORF119.mrna1;Target=ORF119 576 907 +
Chr2	stalkie_big_nohaplotig	exon	38189771	38189884	98	+	.	Parent=ORF119.mrna1;Target=ORF119 908 1021 +
Chr2	stalkie_big_nohaplotig	exon	38189946	38189988	100	+	.	Parent=ORF119.mrna1;Target=ORF119 1022 1064 +
Chr2	stalkie_big_nohaplotig	exon	38190054	38190110	100	+	.	Parent=ORF119.mrna1;Target=ORF119 1065 1121 +
Chr2	stalkie_big_nohaplotig	exon	38190173	38190510	99	+	.	Parent=ORF119.mrna1;Target=ORF119 1122 1459 +
Chr2	stalkie_big_nohaplotig	exon	38190566	38190661	98	+	.	Parent=ORF119.mrna1;Target=ORF119 1460 1555 +
Chr2	stalkie_big_nohaplotig	exon	38190728	38190884	96	+	.	Parent=ORF119.mrna1;Target=ORF119 1556 1712 +
Chr2	stalkie_big_nohaplotig	exon	38190947	38191108	94	+	.	Parent=ORF119.mrna1;Target=ORF119 1713 1868 +
Chr2	stalkie_big_nohaplotig	exon	38191167	38191463	92	+	.	Parent=ORF119.mrna1;Target=ORF119 1869 2165 +
Chr2	stalkie_big_nohaplotig	exon	38191964	38192280	80	+	.	Parent=ORF119.mrna1;Target=ORF119 2166 2482 +
Chr2	stalkie_big_nohaplotig	CDS	38188620	38188765	.	+	0	Parent=ORF119.mrna1;Target=ORF119 1 146 +
Chr2	stalkie_big_nohaplotig	CDS	38188830	38189210	.	+	1	Parent=ORF119.mrna1;Target=ORF119 147 527 +
Chr2	stalkie_big_nohaplotig	CDS	38189277	38189324	.	+	1	Parent=ORF119.mrna1;Target=ORF119 528 575 +
Chr2	stalkie_big_nohaplotig	CDS	38189386	38189717	.	+	1	Parent=ORF119.mrna1;Target=ORF119 576 907 +
Chr2	stalkie_big_nohaplotig	CDS	38189771	38189884	.	+	2	Parent=ORF119.mrna1;Target=ORF119 908 1021 +
Chr2	stalkie_big_nohaplotig	CDS	38189946	38189988	.	+	2	Parent=ORF119.mrna1;Target=ORF119 1022 1064 +
Chr2	stalkie_big_nohaplotig	CDS	38190054	38190110	.	+	1	Parent=ORF119.mrna1;Target=ORF119 1065 1121 +
Chr2	stalkie_big_nohaplotig	CDS	38190173	38190510	.	+	1	Parent=ORF119.mrna1;Target=ORF119 1122 1459 +
Chr2	stalkie_big_nohaplotig	CDS	38190566	38190661	.	+	2	Parent=ORF119.mrna1;Target=ORF119 1460 1555 +
Chr2	stalkie_big_nohaplotig	CDS	38190728	38190884	.	+	2	Parent=ORF119.mrna1;Target=ORF119 1556 1712 +
Chr2	stalkie_big_nohaplotig	CDS	38190947	38191108	.	+	1	Parent=ORF119.mrna1;Target=ORF119 1713 1868 +
Chr2	stalkie_big_nohaplotig	CDS	38191167	38191463	.	+	1	Parent=ORF119.mrna1;Target=ORF119 1869 2165 +
Chr2	stalkie_big_nohaplotig	CDS	38191964	38192279	.	+	1	Parent=ORF119.mrna1;Target=ORF119 2166 2481 +
Chr2	gffcl	locus	38209247	38210877	.	+	.	ID=RLOC_00016595;geneIDs=FBgn0025186.1.path1;transcripts=FBgn0025186.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38209247	38210877	.	+	.	ID=FBgn0025186.1.mrna1;geneID=FBgn0025186.1.path1;Name=FBgn0025186.1;Dir=sensecoverage=94.8;identity=99.9;matches=1507;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016595
Chr2	stalkie_big_nohaplotig	exon	38209247	38209794	100	+	.	Parent=FBgn0025186.1.mrna1;Target=FBgn0025186.1 83 630 +
Chr2	stalkie_big_nohaplotig	exon	38209855	38210670	100	+	.	Parent=FBgn0025186.1.mrna1;Target=FBgn0025186.1 631 1446 +
Chr2	stalkie_big_nohaplotig	exon	38210734	38210877	99	+	.	Parent=FBgn0025186.1.mrna1;Target=FBgn0025186.1 1447 1590 +
Chr2	stalkie_big_nohaplotig	CDS	38209249	38209794	.	+	0	Parent=FBgn0025186.1.mrna1;Target=FBgn0025186.1 85 630 +
Chr2	stalkie_big_nohaplotig	CDS	38209855	38210670	.	+	0	Parent=FBgn0025186.1.mrna1;Target=FBgn0025186.1 631 1446 +
Chr2	stalkie_big_nohaplotig	CDS	38210734	38210877	.	+	0	Parent=FBgn0025186.1.mrna1;Target=FBgn0025186.1 1447 1590 +
Chr2	gffcl	locus	38212314	38212928	.	+	.	ID=RLOC_00016596;geneIDs=comp114910_c0_seq1.path1;transcripts=comp114910_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38212314	38212928	.	+	.	ID=comp114910_c0_seq1.mrna1;geneID=comp114910_c0_seq1.path1;Name=comp114910_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=615;mismatches=0;indels=0;unknowns=0;Target=comp114910_c0_seq1 615 1 .;CDS_Target=comp114910_c0_seq1 202 101 .;locus=RLOC_00016596
Chr2	stalkie_big_nohaplotig	exon	38212314	38212928	100	+	.	Parent=comp114910_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38212414	38212515	.	+	0	Parent=comp114910_c0_seq1.mrna1
Chr2	gffcl	locus	38213591	38214816	.	-	.	ID=RLOC_00016597;geneIDs=FBgn0033934.1.path1;transcripts=FBgn0033934.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38213591	38214816	.	-	.	ID=FBgn0033934.1.mrna1;geneID=FBgn0033934.1.path1;Name=FBgn0033934.1;Dir=sensecoverage=100.0;identity=99.9;matches=788;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016597
Chr2	stalkie_big_nohaplotig	exon	38213591	38213714	100	-	.	Parent=FBgn0033934.1.mrna1;Target=FBgn0033934.1 666 789 +
Chr2	stalkie_big_nohaplotig	exon	38213786	38214035	100	-	.	Parent=FBgn0033934.1.mrna1;Target=FBgn0033934.1 416 665 +
Chr2	stalkie_big_nohaplotig	exon	38214340	38214646	100	-	.	Parent=FBgn0033934.1.mrna1;Target=FBgn0033934.1 109 415 +
Chr2	stalkie_big_nohaplotig	exon	38214709	38214816	99	-	.	Parent=FBgn0033934.1.mrna1;Target=FBgn0033934.1 1 108 +
Chr2	stalkie_big_nohaplotig	CDS	38213591	38213714	.	-	1	Parent=FBgn0033934.1.mrna1;Target=FBgn0033934.1 666 789 +
Chr2	stalkie_big_nohaplotig	CDS	38213786	38214035	.	-	2	Parent=FBgn0033934.1.mrna1;Target=FBgn0033934.1 416 665 +
Chr2	stalkie_big_nohaplotig	CDS	38214340	38214646	.	-	0	Parent=FBgn0033934.1.mrna1;Target=FBgn0033934.1 109 415 +
Chr2	stalkie_big_nohaplotig	CDS	38214709	38214816	.	-	0	Parent=FBgn0033934.1.mrna1;Target=FBgn0033934.1 1 108 +
Chr2	gffcl	locus	38224627	38260825	.	-	.	ID=RLOC_00016599;geneIDs=FBgn0033932.1.path1;transcripts=FBgn0033932.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38224627	38260825	.	-	.	ID=FBgn0033932.1.mrna1;geneID=FBgn0033932.1.path1;Name=FBgn0033932.1;Dir=sensecoverage=79.3;identity=99.6;matches=1215;mismatches=5;indels=0;unknowns=0;locus=RLOC_00016599
Chr2	stalkie_big_nohaplotig	exon	38224627	38224650	95	-	.	Parent=FBgn0033932.1.mrna1;Target=FBgn0033932.1 1516 1539 +
Chr2	stalkie_big_nohaplotig	exon	38227180	38227363	100	-	.	Parent=FBgn0033932.1.mrna1;Target=FBgn0033932.1 1332 1515 +
Chr2	stalkie_big_nohaplotig	exon	38229590	38229643	100	-	.	Parent=FBgn0033932.1.mrna1;Target=FBgn0033932.1 1278 1331 +
Chr2	stalkie_big_nohaplotig	exon	38238794	38238909	100	-	.	Parent=FBgn0033932.1.mrna1;Target=FBgn0033932.1 1162 1277 +
Chr2	stalkie_big_nohaplotig	exon	38239075	38239263	99	-	.	Parent=FBgn0033932.1.mrna1;Target=FBgn0033932.1 973 1161 +
Chr2	stalkie_big_nohaplotig	exon	38249294	38249404	100	-	.	Parent=FBgn0033932.1.mrna1;Target=FBgn0033932.1 862 972 +
Chr2	stalkie_big_nohaplotig	exon	38250017	38250087	100	-	.	Parent=FBgn0033932.1.mrna1;Target=FBgn0033932.1 791 861 +
Chr2	stalkie_big_nohaplotig	exon	38253315	38253395	100	-	.	Parent=FBgn0033932.1.mrna1;Target=FBgn0033932.1 710 790 +
Chr2	stalkie_big_nohaplotig	exon	38253811	38253904	100	-	.	Parent=FBgn0033932.1.mrna1;Target=FBgn0033932.1 616 709 +
Chr2	stalkie_big_nohaplotig	exon	38256317	38256410	100	-	.	Parent=FBgn0033932.1.mrna1;Target=FBgn0033932.1 522 615 +
Chr2	stalkie_big_nohaplotig	exon	38260624	38260825	98	-	.	Parent=FBgn0033932.1.mrna1;Target=FBgn0033932.1 320 521 +
Chr2	stalkie_big_nohaplotig	CDS	38224627	38224650	.	-	0	Parent=FBgn0033932.1.mrna1;Target=FBgn0033932.1 1516 1539 +
Chr2	stalkie_big_nohaplotig	CDS	38227180	38227363	.	-	1	Parent=FBgn0033932.1.mrna1;Target=FBgn0033932.1 1332 1515 +
Chr2	stalkie_big_nohaplotig	CDS	38229590	38229643	.	-	1	Parent=FBgn0033932.1.mrna1;Target=FBgn0033932.1 1278 1331 +
Chr2	stalkie_big_nohaplotig	CDS	38238794	38238909	.	-	0	Parent=FBgn0033932.1.mrna1;Target=FBgn0033932.1 1162 1277 +
Chr2	stalkie_big_nohaplotig	CDS	38239075	38239263	.	-	0	Parent=FBgn0033932.1.mrna1;Target=FBgn0033932.1 973 1161 +
Chr2	stalkie_big_nohaplotig	CDS	38249294	38249404	.	-	0	Parent=FBgn0033932.1.mrna1;Target=FBgn0033932.1 862 972 +
Chr2	stalkie_big_nohaplotig	CDS	38250017	38250087	.	-	2	Parent=FBgn0033932.1.mrna1;Target=FBgn0033932.1 791 861 +
Chr2	stalkie_big_nohaplotig	CDS	38253315	38253395	.	-	2	Parent=FBgn0033932.1.mrna1;Target=FBgn0033932.1 710 790 +
Chr2	stalkie_big_nohaplotig	CDS	38253811	38253904	.	-	0	Parent=FBgn0033932.1.mrna1;Target=FBgn0033932.1 616 709 +
Chr2	stalkie_big_nohaplotig	CDS	38256317	38256410	.	-	1	Parent=FBgn0033932.1.mrna1;Target=FBgn0033932.1 522 615 +
Chr2	stalkie_big_nohaplotig	CDS	38260624	38260823	.	-	0	Parent=FBgn0033932.1.mrna1;Target=FBgn0033932.1 322 521 +
Chr2	gffcl	locus	38316953	38317699	.	-	.	ID=RLOC_00016600;geneIDs=FBgn0033926.1.path1;transcripts=FBgn0033926.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38316953	38317699	.	-	.	ID=FBgn0033926.1.mrna1;geneID=FBgn0033926.1.path1;Name=FBgn0033926.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=747;mismatches=0;indels=0;unknowns=0;Target=FBgn0033926.1 747 1 .;locus=RLOC_00016600
Chr2	stalkie_big_nohaplotig	exon	38316953	38317699	100	-	.	Parent=FBgn0033926.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38316953	38317699	.	-	0	Parent=FBgn0033926.1.mrna1
Chr2	gffcl	locus	38324037	38326337	.	+	.	ID=RLOC_00016601;geneIDs=FBgn0033929.1.path2;transcripts=FBgn0033929.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	38324037	38326337	.	+	.	ID=FBgn0033929.1.mrna2;geneID=FBgn0033929.1.path2;Name=FBgn0033929.1;Dir=sensecoverage=100.0;identity=99.5;matches=1814;mismatches=10;indels=0;unknowns=0;locus=RLOC_00016601
Chr2	stalkie_big_nohaplotig	exon	38324037	38324048	100	+	.	Parent=FBgn0033929.1.mrna2;Target=FBgn0033929.1 1 12 +
Chr2	stalkie_big_nohaplotig	exon	38324200	38324398	100	+	.	Parent=FBgn0033929.1.mrna2;Target=FBgn0033929.1 13 211 +
Chr2	stalkie_big_nohaplotig	exon	38324453	38324791	99	+	.	Parent=FBgn0033929.1.mrna2;Target=FBgn0033929.1 212 550 +
Chr2	stalkie_big_nohaplotig	exon	38324852	38325288	99	+	.	Parent=FBgn0033929.1.mrna2;Target=FBgn0033929.1 551 987 +
Chr2	stalkie_big_nohaplotig	exon	38325353	38325890	98	+	.	Parent=FBgn0033929.1.mrna2;Target=FBgn0033929.1 988 1525 +
Chr2	stalkie_big_nohaplotig	exon	38325976	38326151	100	+	.	Parent=FBgn0033929.1.mrna2;Target=FBgn0033929.1 1526 1701 +
Chr2	stalkie_big_nohaplotig	exon	38326215	38326337	100	+	.	Parent=FBgn0033929.1.mrna2;Target=FBgn0033929.1 1702 1824 +
Chr2	stalkie_big_nohaplotig	CDS	38324037	38324048	.	+	0	Parent=FBgn0033929.1.mrna2;Target=FBgn0033929.1 1 12 +
Chr2	stalkie_big_nohaplotig	CDS	38324200	38324398	.	+	0	Parent=FBgn0033929.1.mrna2;Target=FBgn0033929.1 13 211 +
Chr2	stalkie_big_nohaplotig	CDS	38324453	38324791	.	+	2	Parent=FBgn0033929.1.mrna2;Target=FBgn0033929.1 212 550 +
Chr2	stalkie_big_nohaplotig	CDS	38324852	38325288	.	+	2	Parent=FBgn0033929.1.mrna2;Target=FBgn0033929.1 551 987 +
Chr2	stalkie_big_nohaplotig	CDS	38325353	38325890	.	+	0	Parent=FBgn0033929.1.mrna2;Target=FBgn0033929.1 988 1525 +
Chr2	stalkie_big_nohaplotig	CDS	38325976	38326151	.	+	2	Parent=FBgn0033929.1.mrna2;Target=FBgn0033929.1 1526 1701 +
Chr2	stalkie_big_nohaplotig	CDS	38326215	38326337	.	+	0	Parent=FBgn0033929.1.mrna2;Target=FBgn0033929.1 1702 1824 +
Chr2	gffcl	locus	38326884	38328283	.	+	.	ID=RLOC_00016602;geneIDs=comp151783_c0_seq1.path1;transcripts=comp151783_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38326884	38328283	.	+	.	ID=comp151783_c0_seq1.mrna1;geneID=comp151783_c0_seq1.path1;Name=comp151783_c0_seq1;Dir=antisensecoverage=100.0;identity=98.2;matches=955;mismatches=18;indels=0;unknowns=0;Target=comp151783_c0_seq1 860 907 .;locus=RLOC_00016602
Chr2	stalkie_big_nohaplotig	exon	38326884	38327026	94	+	.	Parent=comp151783_c0_seq1.mrna1;Target=comp151783_c0_seq1 831 973 -
Chr2	stalkie_big_nohaplotig	exon	38327380	38327512	98	+	.	Parent=comp151783_c0_seq1.mrna1;Target=comp151783_c0_seq1 698 830 -
Chr2	stalkie_big_nohaplotig	exon	38327587	38328283	98	+	.	Parent=comp151783_c0_seq1.mrna1;Target=comp151783_c0_seq1 1 697 -
Chr2	stalkie_big_nohaplotig	CDS	38326950	38326997	.	+	0	Parent=comp151783_c0_seq1.mrna1
Chr2	gffcl	locus	38345920	38346716	.	+	.	ID=RLOC_00016603;geneIDs=comp146091_c0_seq1.path1;transcripts=comp146091_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38345920	38346716	.	+	.	ID=comp146091_c0_seq1.mrna1;geneID=comp146091_c0_seq1.path1;Name=comp146091_c0_seq1;Dir=antisensecoverage=99.9;identity=97.7;matches=667;mismatches=16;indels=0;unknowns=0;locus=RLOC_00016603
Chr2	stalkie_big_nohaplotig	exon	38345920	38346032	98	+	.	Parent=comp146091_c0_seq1.mrna1;Target=comp146091_c0_seq1 571 683 -
Chr2	stalkie_big_nohaplotig	exon	38346087	38346215	98	+	.	Parent=comp146091_c0_seq1.mrna1;Target=comp146091_c0_seq1 442 570 -
Chr2	stalkie_big_nohaplotig	exon	38346276	38346716	97	+	.	Parent=comp146091_c0_seq1.mrna1;Target=comp146091_c0_seq1 1 441 -
Chr2	stalkie_big_nohaplotig	CDS	38345922	38346032	.	+	0	Parent=comp146091_c0_seq1.mrna1;Target=comp146091_c0_seq1 571 681 .
Chr2	stalkie_big_nohaplotig	CDS	38346087	38346215	.	+	0	Parent=comp146091_c0_seq1.mrna1;Target=comp146091_c0_seq1 442 570 .
Chr2	stalkie_big_nohaplotig	CDS	38346276	38346698	.	+	0	Parent=comp146091_c0_seq1.mrna1;Target=comp146091_c0_seq1 19 441 .
Chr2	gffcl	locus	38349636	38350508	.	-	.	ID=RLOC_00016604;geneIDs=FBgn0033931.1.path1;transcripts=FBgn0033931.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38349636	38350508	.	-	.	ID=FBgn0033931.1.mrna1;geneID=FBgn0033931.1.path1;Name=FBgn0033931.1;Dir=sensecoverage=100.0;identity=100.0;matches=546;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016604
Chr2	stalkie_big_nohaplotig	exon	38349636	38349847	100	-	.	Parent=FBgn0033931.1.mrna1;Target=FBgn0033931.1 335 546 +
Chr2	stalkie_big_nohaplotig	exon	38349970	38350126	100	-	.	Parent=FBgn0033931.1.mrna1;Target=FBgn0033931.1 178 334 +
Chr2	stalkie_big_nohaplotig	exon	38350205	38350324	100	-	.	Parent=FBgn0033931.1.mrna1;Target=FBgn0033931.1 58 177 +
Chr2	stalkie_big_nohaplotig	exon	38350452	38350508	100	-	.	Parent=FBgn0033931.1.mrna1;Target=FBgn0033931.1 1 57 +
Chr2	stalkie_big_nohaplotig	CDS	38349636	38349847	.	-	2	Parent=FBgn0033931.1.mrna1;Target=FBgn0033931.1 335 546 +
Chr2	stalkie_big_nohaplotig	CDS	38349970	38350126	.	-	0	Parent=FBgn0033931.1.mrna1;Target=FBgn0033931.1 178 334 +
Chr2	stalkie_big_nohaplotig	CDS	38350205	38350324	.	-	0	Parent=FBgn0033931.1.mrna1;Target=FBgn0033931.1 58 177 +
Chr2	stalkie_big_nohaplotig	CDS	38350452	38350508	.	-	0	Parent=FBgn0033931.1.mrna1;Target=FBgn0033931.1 1 57 +
Chr2	gffcl	locus	38403408	38404807	.	-	.	ID=RLOC_00016605;geneIDs=comp151783_c0_seq1.path2;transcripts=comp151783_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	38403408	38404807	.	-	.	ID=comp151783_c0_seq1.mrna2;geneID=comp151783_c0_seq1.path2;Name=comp151783_c0_seq1;Dir=antisensecoverage=100.0;identity=98.2;matches=955;mismatches=18;indels=0;unknowns=0;Target=comp151783_c0_seq1 860 907 .;locus=RLOC_00016605
Chr2	stalkie_big_nohaplotig	exon	38403408	38404104	98	-	.	Parent=comp151783_c0_seq1.mrna2;Target=comp151783_c0_seq1 1 697 -
Chr2	stalkie_big_nohaplotig	exon	38404179	38404311	98	-	.	Parent=comp151783_c0_seq1.mrna2;Target=comp151783_c0_seq1 698 830 -
Chr2	stalkie_big_nohaplotig	exon	38404665	38404807	94	-	.	Parent=comp151783_c0_seq1.mrna2;Target=comp151783_c0_seq1 831 973 -
Chr2	stalkie_big_nohaplotig	CDS	38404694	38404741	.	-	0	Parent=comp151783_c0_seq1.mrna2
Chr2	gffcl	locus	38405354	38407653	.	-	.	ID=RLOC_00016606;geneIDs=FBgn0033929.1.path1;transcripts=FBgn0033929.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38405354	38407653	.	-	.	ID=FBgn0033929.1.mrna1;geneID=FBgn0033929.1.path1;Name=FBgn0033929.1;Dir=sensecoverage=100.0;identity=99.6;matches=1816;mismatches=8;indels=0;unknowns=0;locus=RLOC_00016606
Chr2	stalkie_big_nohaplotig	exon	38405354	38405476	100	-	.	Parent=FBgn0033929.1.mrna1;Target=FBgn0033929.1 1702 1824 +
Chr2	stalkie_big_nohaplotig	exon	38405540	38405715	100	-	.	Parent=FBgn0033929.1.mrna1;Target=FBgn0033929.1 1526 1701 +
Chr2	stalkie_big_nohaplotig	exon	38405801	38406338	98	-	.	Parent=FBgn0033929.1.mrna1;Target=FBgn0033929.1 988 1525 +
Chr2	stalkie_big_nohaplotig	exon	38406403	38406839	99	-	.	Parent=FBgn0033929.1.mrna1;Target=FBgn0033929.1 551 987 +
Chr2	stalkie_big_nohaplotig	exon	38406900	38407238	100	-	.	Parent=FBgn0033929.1.mrna1;Target=FBgn0033929.1 212 550 +
Chr2	stalkie_big_nohaplotig	exon	38407293	38407491	100	-	.	Parent=FBgn0033929.1.mrna1;Target=FBgn0033929.1 13 211 +
Chr2	stalkie_big_nohaplotig	exon	38407642	38407653	100	-	.	Parent=FBgn0033929.1.mrna1;Target=FBgn0033929.1 1 12 +
Chr2	stalkie_big_nohaplotig	CDS	38405354	38405476	.	-	0	Parent=FBgn0033929.1.mrna1;Target=FBgn0033929.1 1702 1824 +
Chr2	stalkie_big_nohaplotig	CDS	38405540	38405715	.	-	2	Parent=FBgn0033929.1.mrna1;Target=FBgn0033929.1 1526 1701 +
Chr2	stalkie_big_nohaplotig	CDS	38405801	38406338	.	-	0	Parent=FBgn0033929.1.mrna1;Target=FBgn0033929.1 988 1525 +
Chr2	stalkie_big_nohaplotig	CDS	38406403	38406839	.	-	2	Parent=FBgn0033929.1.mrna1;Target=FBgn0033929.1 551 987 +
Chr2	stalkie_big_nohaplotig	CDS	38406900	38407238	.	-	2	Parent=FBgn0033929.1.mrna1;Target=FBgn0033929.1 212 550 +
Chr2	stalkie_big_nohaplotig	CDS	38407293	38407491	.	-	0	Parent=FBgn0033929.1.mrna1;Target=FBgn0033929.1 13 211 +
Chr2	stalkie_big_nohaplotig	CDS	38407642	38407653	.	-	0	Parent=FBgn0033929.1.mrna1;Target=FBgn0033929.1 1 12 +
Chr2	gffcl	locus	38409171	38409906	.	-	.	ID=RLOC_00016607;geneIDs=FBgn0033928.1.path1;transcripts=FBgn0033928.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38409171	38409906	.	-	.	ID=FBgn0033928.1.mrna1;geneID=FBgn0033928.1.path1;Name=FBgn0033928.1;Dir=sensecoverage=100.0;identity=99.8;matches=659;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016607
Chr2	stalkie_big_nohaplotig	exon	38409171	38409566	99	-	.	Parent=FBgn0033928.1.mrna1;Target=FBgn0033928.1 265 660 +
Chr2	stalkie_big_nohaplotig	exon	38409643	38409906	100	-	.	Parent=FBgn0033928.1.mrna1;Target=FBgn0033928.1 1 264 +
Chr2	stalkie_big_nohaplotig	CDS	38409171	38409566	.	-	0	Parent=FBgn0033928.1.mrna1;Target=FBgn0033928.1 265 660 +
Chr2	stalkie_big_nohaplotig	CDS	38409643	38409906	.	-	0	Parent=FBgn0033928.1.mrna1;Target=FBgn0033928.1 1 264 +
Chr2	gffcl	locus	38415401	38416147	.	+	.	ID=RLOC_00016608;geneIDs=FBgn0033926.1.path2;transcripts=FBgn0033926.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	38415401	38416147	.	+	.	ID=FBgn0033926.1.mrna2;geneID=FBgn0033926.1.path2;Name=FBgn0033926.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=745;mismatches=2;indels=0;unknowns=0;Target=FBgn0033926.1 747 1 .;locus=RLOC_00016608
Chr2	stalkie_big_nohaplotig	exon	38415401	38416147	99	+	.	Parent=FBgn0033926.1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	38415401	38416147	.	+	0	Parent=FBgn0033926.1.mrna2
Chr2	gffcl	locus	38436668	38437414	.	+	.	ID=RLOC_00016609;geneIDs=FBgn0033926.2.path1;transcripts=FBgn0033926.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38436668	38437414	.	+	.	ID=FBgn0033926.2.mrna1;geneID=FBgn0033926.2.path1;Name=FBgn0033926.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=747;mismatches=0;indels=0;unknowns=0;Target=FBgn0033926.2 747 1 .;locus=RLOC_00016609
Chr2	stalkie_big_nohaplotig	exon	38436668	38437414	100	+	.	Parent=FBgn0033926.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38436668	38437414	.	+	0	Parent=FBgn0033926.2.mrna1
Chr2	gffcl	locus	38440027	38441155	.	-	.	ID=RLOC_00016610;geneIDs=comp159424_c1_seq1.path2;transcripts=comp159424_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	38440027	38441155	.	-	.	ID=comp159424_c1_seq1.mrna2;geneID=comp159424_c1_seq1.path2;Name=comp159424_c1_seq1;Dir=sensecoverage=92.1;identity=98.3;matches=1048;mismatches=10;indels=8;unknowns=0;Target=comp159424_c1_seq1 340 438 +;locus=RLOC_00016610
Chr2	stalkie_big_nohaplotig	exon	38440027	38440364	97	-	.	Parent=comp159424_c1_seq1.mrna2;Target=comp159424_c1_seq1 817 1157 +
Chr2	stalkie_big_nohaplotig	exon	38440436	38441155	98	-	.	Parent=comp159424_c1_seq1.mrna2;Target=comp159424_c1_seq1 92 816 +
Chr2	stalkie_big_nohaplotig	CDS	38440809	38440907	.	-	0	Parent=comp159424_c1_seq1.mrna2
Chr2	gffcl	locus	38444172	38444715	.	+	.	ID=RLOC_00016611;geneIDs=comp146987_c0_seq1.path1;transcripts=comp146987_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38444172	38444715	.	+	.	ID=comp146987_c0_seq1.mrna1;geneID=comp146987_c0_seq1.path1;Name=comp146987_c0_seq1;Dir=indeterminatecoverage=88.9;identity=99.8;matches=543;mismatches=1;indels=0;unknowns=0;Target=comp146987_c0_seq1 544 1 .;CDS_Target=comp146987_c0_seq1 445 173 .;locus=RLOC_00016611
Chr2	stalkie_big_nohaplotig	exon	38444172	38444715	99	+	.	Parent=comp146987_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38444344	38444616	.	+	0	Parent=comp146987_c0_seq1.mrna1
Chr2	gffcl	locus	38452744	38454495	.	-	.	ID=RLOC_00016612;geneIDs=ORF484.path1;transcripts=ORF484.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38452744	38454495	.	-	.	ID=ORF484.mrna1;geneID=ORF484.path1;Name=ORF484;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1739;mismatches=13;indels=0;unknowns=0;Target=ORF484 1752 1 .;locus=RLOC_00016612
Chr2	stalkie_big_nohaplotig	exon	38452744	38454495	99	-	.	Parent=ORF484.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38452744	38454495	.	-	0	Parent=ORF484.mrna1
Chr2	gffcl	locus	38458828	38460236	.	-	.	ID=RLOC_00016613;geneIDs=FBgn0025640.2.path1;transcripts=FBgn0025640.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38458828	38460236	.	-	.	ID=FBgn0025640.2.mrna1;geneID=FBgn0025640.2.path1;Name=FBgn0025640.2;Dir=sensecoverage=100.0;identity=99.6;matches=1055;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016613
Chr2	stalkie_big_nohaplotig	exon	38458828	38459212	99	-	.	Parent=FBgn0025640.2.mrna1;Target=FBgn0025640.2 675 1059 +
Chr2	stalkie_big_nohaplotig	exon	38459269	38459465	100	-	.	Parent=FBgn0025640.2.mrna1;Target=FBgn0025640.2 478 674 +
Chr2	stalkie_big_nohaplotig	exon	38459535	38459660	99	-	.	Parent=FBgn0025640.2.mrna1;Target=FBgn0025640.2 352 477 +
Chr2	stalkie_big_nohaplotig	exon	38459731	38459820	100	-	.	Parent=FBgn0025640.2.mrna1;Target=FBgn0025640.2 262 351 +
Chr2	stalkie_big_nohaplotig	exon	38459887	38460019	98	-	.	Parent=FBgn0025640.2.mrna1;Target=FBgn0025640.2 129 261 +
Chr2	stalkie_big_nohaplotig	exon	38460109	38460236	100	-	.	Parent=FBgn0025640.2.mrna1;Target=FBgn0025640.2 1 128 +
Chr2	stalkie_big_nohaplotig	CDS	38458828	38459212	.	-	1	Parent=FBgn0025640.2.mrna1;Target=FBgn0025640.2 675 1059 +
Chr2	stalkie_big_nohaplotig	CDS	38459269	38459465	.	-	0	Parent=FBgn0025640.2.mrna1;Target=FBgn0025640.2 478 674 +
Chr2	stalkie_big_nohaplotig	CDS	38459535	38459660	.	-	0	Parent=FBgn0025640.2.mrna1;Target=FBgn0025640.2 352 477 +
Chr2	stalkie_big_nohaplotig	CDS	38459731	38459820	.	-	0	Parent=FBgn0025640.2.mrna1;Target=FBgn0025640.2 262 351 +
Chr2	stalkie_big_nohaplotig	CDS	38459887	38460019	.	-	1	Parent=FBgn0025640.2.mrna1;Target=FBgn0025640.2 129 261 +
Chr2	stalkie_big_nohaplotig	CDS	38460109	38460236	.	-	0	Parent=FBgn0025640.2.mrna1;Target=FBgn0025640.2 1 128 +
Chr2	gffcl	locus	38461824	38462203	.	+	.	ID=RLOC_00016614;geneIDs=comp117219_c0_seq1.path1;transcripts=comp117219_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38461824	38462203	.	+	.	ID=comp117219_c0_seq1.mrna1;geneID=comp117219_c0_seq1.path1;Name=comp117219_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=380;mismatches=0;indels=0;unknowns=0;Target=comp117219_c0_seq1 380 1 .;CDS_Target=comp117219_c0_seq1 350 288 .;locus=RLOC_00016614
Chr2	stalkie_big_nohaplotig	exon	38461824	38462203	100	+	.	Parent=comp117219_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38462111	38462173	.	+	0	Parent=comp117219_c0_seq1.mrna1
Chr2	gffcl	locus	38467144	38467749	.	+	.	ID=RLOC_00016615;geneIDs=comp948271_c0_seq1.path1;transcripts=comp948271_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38467144	38467749	.	+	.	ID=comp948271_c0_seq1.mrna1;geneID=comp948271_c0_seq1.path1;Name=comp948271_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=605;mismatches=1;indels=0;unknowns=0;Target=comp948271_c0_seq1 606 1 .;CDS_Target=comp948271_c0_seq1 218 3 .;locus=RLOC_00016615
Chr2	stalkie_big_nohaplotig	exon	38467144	38467749	99	+	.	Parent=comp948271_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38467146	38467361	.	+	0	Parent=comp948271_c0_seq1.mrna1
Chr2	gffcl	locus	38473536	38475344	.	-	.	ID=RLOC_00016616;geneIDs=ORF437.path1;transcripts=ORF437.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38473536	38475344	.	-	.	ID=ORF437.mrna1;geneID=ORF437.path1;Name=ORF437;Dir=indeterminatecoverage=99.3;identity=99.8;matches=1805;mismatches=4;indels=0;unknowns=0;Target=ORF437 1821 13 .;locus=RLOC_00016616
Chr2	stalkie_big_nohaplotig	exon	38473536	38475344	99	-	.	Parent=ORF437.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38473536	38475344	.	-	0	Parent=ORF437.mrna1
Chr2	gffcl	locus	38596943	38597425	.	+	.	ID=RLOC_00016617;geneIDs=FBgn0000253.2.path1;transcripts=FBgn0000253.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38596943	38597425	.	+	.	ID=FBgn0000253.2.mrna1;geneID=FBgn0000253.2.path1;Name=FBgn0000253.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=483;mismatches=0;indels=0;unknowns=0;Target=FBgn0000253.2 483 1 .;locus=RLOC_00016617
Chr2	stalkie_big_nohaplotig	exon	38596943	38597425	100	+	.	Parent=FBgn0000253.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38596943	38597425	.	+	0	Parent=FBgn0000253.2.mrna1
Chr2	gffcl	locus	38640814	38649026	.	+	.	ID=RLOC_00016618;geneIDs=FBgn0011592.1.path1;transcripts=FBgn0011592.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38640814	38649026	.	+	.	ID=FBgn0011592.1.mrna1;geneID=FBgn0011592.1.path1;Name=FBgn0011592.1;Dir=sensecoverage=100.0;identity=99.4;matches=3436;mismatches=19;indels=1;unknowns=0;locus=RLOC_00016618
Chr2	stalkie_big_nohaplotig	exon	38640814	38640870	100	+	.	Parent=FBgn0011592.1.mrna1;Target=FBgn0011592.1 1 57 +
Chr2	stalkie_big_nohaplotig	exon	38642843	38643590	99	+	.	Parent=FBgn0011592.1.mrna1;Target=FBgn0011592.1 58 806 +
Chr2	stalkie_big_nohaplotig	exon	38643757	38643883	100	+	.	Parent=FBgn0011592.1.mrna1;Target=FBgn0011592.1 807 933 +
Chr2	stalkie_big_nohaplotig	exon	38643938	38644093	98	+	.	Parent=FBgn0011592.1.mrna1;Target=FBgn0011592.1 934 1089 +
Chr2	stalkie_big_nohaplotig	exon	38644856	38645065	99	+	.	Parent=FBgn0011592.1.mrna1;Target=FBgn0011592.1 1090 1299 +
Chr2	stalkie_big_nohaplotig	exon	38645135	38645630	99	+	.	Parent=FBgn0011592.1.mrna1;Target=FBgn0011592.1 1300 1795 +
Chr2	stalkie_big_nohaplotig	exon	38645697	38646543	99	+	.	Parent=FBgn0011592.1.mrna1;Target=FBgn0011592.1 1796 2642 +
Chr2	stalkie_big_nohaplotig	exon	38646605	38646711	98	+	.	Parent=FBgn0011592.1.mrna1;Target=FBgn0011592.1 2643 2749 +
Chr2	stalkie_big_nohaplotig	exon	38646770	38646907	98	+	.	Parent=FBgn0011592.1.mrna1;Target=FBgn0011592.1 2750 2887 +
Chr2	stalkie_big_nohaplotig	exon	38646966	38647146	100	+	.	Parent=FBgn0011592.1.mrna1;Target=FBgn0011592.1 2888 3068 +
Chr2	stalkie_big_nohaplotig	exon	38647296	38647456	100	+	.	Parent=FBgn0011592.1.mrna1;Target=FBgn0011592.1 3069 3229 +
Chr2	stalkie_big_nohaplotig	exon	38648800	38649026	100	+	.	Parent=FBgn0011592.1.mrna1;Target=FBgn0011592.1 3230 3456 +
Chr2	stalkie_big_nohaplotig	CDS	38640816	38640870	.	+	0	Parent=FBgn0011592.1.mrna1;Target=FBgn0011592.1 3 57 +
Chr2	stalkie_big_nohaplotig	CDS	38642843	38642939	.	+	2	Parent=FBgn0011592.1.mrna1;Target=FBgn0011592.1 58 155 +
Chr2	gffcl	locus	38651169	38652075	.	+	.	ID=RLOC_00016619;geneIDs=comp148949_c0_seq1.path1;transcripts=comp148949_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38651169	38652075	.	+	.	ID=comp148949_c0_seq1.mrna1;geneID=comp148949_c0_seq1.path1;Name=comp148949_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=893;mismatches=11;indels=3;unknowns=0;Target=comp148949_c0_seq1 904 1 .;CDS_Target=comp148949_c0_seq1 162 1 .;locus=RLOC_00016619
Chr2	stalkie_big_nohaplotig	exon	38651169	38652075	98	+	.	Parent=comp148949_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38651169	38651330	.	+	0	Parent=comp148949_c0_seq1.mrna1
Chr2	gffcl	locus	38654740	38686988	.	+	.	ID=RLOC_00016620;geneIDs=FBgn0033753.1.path1;transcripts=FBgn0033753.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38654740	38686988	.	+	.	ID=FBgn0033753.1.mrna1;geneID=FBgn0033753.1.path1;Name=FBgn0033753.1;Dir=sensecoverage=100.0;identity=99.3;matches=1636;mismatches=11;indels=0;unknowns=0;locus=RLOC_00016620
Chr2	stalkie_big_nohaplotig	exon	38654740	38654996	96	+	.	Parent=FBgn0033753.1.mrna1;Target=FBgn0033753.1 1 257 +
Chr2	stalkie_big_nohaplotig	exon	38683941	38684091	100	+	.	Parent=FBgn0033753.1.mrna1;Target=FBgn0033753.1 258 408 +
Chr2	stalkie_big_nohaplotig	exon	38685337	38685449	99	+	.	Parent=FBgn0033753.1.mrna1;Target=FBgn0033753.1 409 521 +
Chr2	stalkie_big_nohaplotig	exon	38685522	38685715	99	+	.	Parent=FBgn0033753.1.mrna1;Target=FBgn0033753.1 522 715 +
Chr2	stalkie_big_nohaplotig	exon	38685777	38685978	100	+	.	Parent=FBgn0033753.1.mrna1;Target=FBgn0033753.1 716 917 +
Chr2	stalkie_big_nohaplotig	exon	38686112	38686274	100	+	.	Parent=FBgn0033753.1.mrna1;Target=FBgn0033753.1 918 1080 +
Chr2	stalkie_big_nohaplotig	exon	38686357	38686818	100	+	.	Parent=FBgn0033753.1.mrna1;Target=FBgn0033753.1 1081 1542 +
Chr2	stalkie_big_nohaplotig	exon	38686884	38686988	100	+	.	Parent=FBgn0033753.1.mrna1;Target=FBgn0033753.1 1543 1647 +
Chr2	stalkie_big_nohaplotig	CDS	38654740	38654996	.	+	0	Parent=FBgn0033753.1.mrna1;Target=FBgn0033753.1 1 257 +
Chr2	stalkie_big_nohaplotig	CDS	38683941	38684091	.	+	1	Parent=FBgn0033753.1.mrna1;Target=FBgn0033753.1 258 408 +
Chr2	stalkie_big_nohaplotig	CDS	38685337	38685449	.	+	0	Parent=FBgn0033753.1.mrna1;Target=FBgn0033753.1 409 521 +
Chr2	stalkie_big_nohaplotig	CDS	38685522	38685715	.	+	1	Parent=FBgn0033753.1.mrna1;Target=FBgn0033753.1 522 715 +
Chr2	stalkie_big_nohaplotig	CDS	38685777	38685978	.	+	2	Parent=FBgn0033753.1.mrna1;Target=FBgn0033753.1 716 917 +
Chr2	stalkie_big_nohaplotig	CDS	38686112	38686274	.	+	1	Parent=FBgn0033753.1.mrna1;Target=FBgn0033753.1 918 1080 +
Chr2	stalkie_big_nohaplotig	CDS	38686357	38686818	.	+	0	Parent=FBgn0033753.1.mrna1;Target=FBgn0033753.1 1081 1542 +
Chr2	stalkie_big_nohaplotig	CDS	38686884	38686988	.	+	0	Parent=FBgn0033753.1.mrna1;Target=FBgn0033753.1 1543 1647 +
Chr2	gffcl	locus	38680342	40660232	.	-	.	ID=RLOC_00016621;geneIDs=comp153899_c0_seq1.path2;transcripts=comp153899_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	38680342	40660232	.	-	.	ID=comp153899_c0_seq1.mrna2;geneID=comp153899_c0_seq1.path2;Name=comp153899_c0_seq1;Dir=indeterminatecoverage=46.5;identity=99.3;matches=858;mismatches=4;indels=2;unknowns=0;Target=comp153899_c0_seq1 1069 1013 .;locus=RLOC_00016621
Chr2	stalkie_big_nohaplotig	exon	38680342	38680344	100	-	.	Parent=comp153899_c0_seq1.mrna2;Target=comp153899_c0_seq1 1853 1851 .
Chr2	stalkie_big_nohaplotig	exon	38684112	38684119	100	-	.	Parent=comp153899_c0_seq1.mrna2;Target=comp153899_c0_seq1 1850 1843 .
Chr2	stalkie_big_nohaplotig	exon	38693305	38693310	100	-	.	Parent=comp153899_c0_seq1.mrna2;Target=comp153899_c0_seq1 1842 1837 .
Chr2	stalkie_big_nohaplotig	exon	38696818	38696821	100	-	.	Parent=comp153899_c0_seq1.mrna2;Target=comp153899_c0_seq1 1836 1833 .
Chr2	stalkie_big_nohaplotig	exon	38699190	38699194	100	-	.	Parent=comp153899_c0_seq1.mrna2;Target=comp153899_c0_seq1 1832 1828 .
Chr2	stalkie_big_nohaplotig	exon	38699308	38699316	100	-	.	Parent=comp153899_c0_seq1.mrna2;Target=comp153899_c0_seq1 1827 1819 .
Chr2	stalkie_big_nohaplotig	exon	38699324	38699333	100	-	.	Parent=comp153899_c0_seq1.mrna2;Target=comp153899_c0_seq1 1810 1801 .
Chr2	stalkie_big_nohaplotig	exon	38700963	38700970	100	-	.	Parent=comp153899_c0_seq1.mrna2;Target=comp153899_c0_seq1 1800 1793 .
Chr2	stalkie_big_nohaplotig	exon	38703547	38703550	100	-	.	Parent=comp153899_c0_seq1.mrna2;Target=comp153899_c0_seq1 1792 1789 .
Chr2	stalkie_big_nohaplotig	exon	38703615	38703617	100	-	.	Parent=comp153899_c0_seq1.mrna2;Target=comp153899_c0_seq1 1788 1786 .
Chr2	stalkie_big_nohaplotig	exon	38706712	38706713	100	-	.	Parent=comp153899_c0_seq1.mrna2;Target=comp153899_c0_seq1 1785 1784 .
Chr2	stalkie_big_nohaplotig	exon	38713841	38713847	100	-	.	Parent=comp153899_c0_seq1.mrna2;Target=comp153899_c0_seq1 1783 1777 .
Chr2	stalkie_big_nohaplotig	exon	38723778	38723780	100	-	.	Parent=comp153899_c0_seq1.mrna2;Target=comp153899_c0_seq1 1776 1774 .
Chr2	stalkie_big_nohaplotig	exon	40659444	40660232	99	-	.	Parent=comp153899_c0_seq1.mrna2;Target=comp153899_c0_seq1 1773 983 .
Chr2	stalkie_big_nohaplotig	CDS	40660147	40660202	.	-	0	Parent=comp153899_c0_seq1.mrna2
Chr2	gffcl	locus	38687438	38688244	.	-	.	ID=RLOC_00016622;geneIDs=FBgn0033754.1.path1;transcripts=FBgn0033754.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38687438	38688244	.	-	.	ID=FBgn0033754.1.mrna1;geneID=FBgn0033754.1.path1;Name=FBgn0033754.1;Dir=sensecoverage=100.0;identity=99.8;matches=533;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016622
Chr2	stalkie_big_nohaplotig	exon	38687438	38687770	100	-	.	Parent=FBgn0033754.1.mrna1;Target=FBgn0033754.1 202 534 +
Chr2	stalkie_big_nohaplotig	exon	38687835	38687986	99	-	.	Parent=FBgn0033754.1.mrna1;Target=FBgn0033754.1 50 201 +
Chr2	stalkie_big_nohaplotig	exon	38688196	38688244	100	-	.	Parent=FBgn0033754.1.mrna1;Target=FBgn0033754.1 1 49 +
Chr2	stalkie_big_nohaplotig	CDS	38687438	38687770	.	-	0	Parent=FBgn0033754.1.mrna1;Target=FBgn0033754.1 202 534 +
Chr2	stalkie_big_nohaplotig	CDS	38687835	38687986	.	-	2	Parent=FBgn0033754.1.mrna1;Target=FBgn0033754.1 50 201 +
Chr2	stalkie_big_nohaplotig	CDS	38688196	38688244	.	-	0	Parent=FBgn0033754.1.mrna1;Target=FBgn0033754.1 1 49 +
Chr2	gffcl	locus	38695330	38699245	.	+	.	ID=RLOC_00016623;geneIDs=FBgn0003527.1.path1,comp157501_c0_seq1.path1;transcripts=comp157501_c0_seq1.mrna1,FBgn0003527.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38695330	38699245	.	+	.	ID=comp157501_c0_seq1.mrna1;geneID=comp157501_c0_seq1.path1;Name=comp157501_c0_seq1;Dir=antisensecoverage=99.9;identity=99.8;matches=1673;mismatches=1;indels=3;unknowns=0;locus=RLOC_00016623
Chr2	stalkie_big_nohaplotig	exon	38695330	38696002	99	+	.	Parent=comp157501_c0_seq1.mrna1;Target=comp157501_c0_seq1 1002 1677 -
Chr2	stalkie_big_nohaplotig	exon	38696115	38696396	100	+	.	Parent=comp157501_c0_seq1.mrna1;Target=comp157501_c0_seq1 720 1001 -
Chr2	stalkie_big_nohaplotig	exon	38696449	38696616	100	+	.	Parent=comp157501_c0_seq1.mrna1;Target=comp157501_c0_seq1 552 719 -
Chr2	stalkie_big_nohaplotig	exon	38698695	38699245	100	+	.	Parent=comp157501_c0_seq1.mrna1;Target=comp157501_c0_seq1 1 551 -
Chr2	stalkie_big_nohaplotig	CDS	38695727	38696002	.	+	0	Parent=comp157501_c0_seq1.mrna1;Target=comp157501_c0_seq1 1002 1280 .
Chr2	stalkie_big_nohaplotig	CDS	38696115	38696396	.	+	0	Parent=comp157501_c0_seq1.mrna1;Target=comp157501_c0_seq1 720 1001 .
Chr2	stalkie_big_nohaplotig	CDS	38696449	38696616	.	+	0	Parent=comp157501_c0_seq1.mrna1;Target=comp157501_c0_seq1 552 719 .
Chr2	stalkie_big_nohaplotig	CDS	38698695	38699096	.	+	0	Parent=comp157501_c0_seq1.mrna1;Target=comp157501_c0_seq1 150 551 .
Chr2	stalkie_big_nohaplotig	mRNA	38695645	38699093	.	+	.	ID=FBgn0003527.1.mrna1;geneID=FBgn0003527.1.path1;Name=FBgn0003527.1;Dir=sensecoverage=100.0;identity=99.7;matches=1145;mismatches=1;indels=3;unknowns=0;locus=RLOC_00016623
Chr2	stalkie_big_nohaplotig	exon	38695645	38695687	100	+	.	Parent=FBgn0003527.1.mrna1;Target=FBgn0003527.1 1 43 +
Chr2	stalkie_big_nohaplotig	exon	38695749	38696002	98	+	.	Parent=FBgn0003527.1.mrna1;Target=FBgn0003527.1 44 300 +
Chr2	stalkie_big_nohaplotig	exon	38696115	38696396	100	+	.	Parent=FBgn0003527.1.mrna1;Target=FBgn0003527.1 301 582 +
Chr2	stalkie_big_nohaplotig	exon	38696449	38696616	100	+	.	Parent=FBgn0003527.1.mrna1;Target=FBgn0003527.1 583 750 +
Chr2	stalkie_big_nohaplotig	exon	38698695	38699093	100	+	.	Parent=FBgn0003527.1.mrna1;Target=FBgn0003527.1 751 1149 +
Chr2	stalkie_big_nohaplotig	CDS	38695645	38695687	.	+	0	Parent=FBgn0003527.1.mrna1;Target=FBgn0003527.1 1 43 +
Chr2	stalkie_big_nohaplotig	CDS	38695749	38696002	.	+	2	Parent=FBgn0003527.1.mrna1;Target=FBgn0003527.1 44 300 +
Chr2	stalkie_big_nohaplotig	CDS	38696115	38696396	.	+	0	Parent=FBgn0003527.1.mrna1;Target=FBgn0003527.1 301 582 +
Chr2	stalkie_big_nohaplotig	CDS	38696449	38696616	.	+	0	Parent=FBgn0003527.1.mrna1;Target=FBgn0003527.1 583 750 +
Chr2	stalkie_big_nohaplotig	CDS	38698695	38699093	.	+	0	Parent=FBgn0003527.1.mrna1;Target=FBgn0003527.1 751 1149 +
Chr2	gffcl	locus	38701156	38701769	.	+	.	ID=RLOC_00016624;geneIDs=comp140027_c0_seq1.path1;transcripts=comp140027_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38701156	38701769	.	+	.	ID=comp140027_c0_seq1.mrna1;geneID=comp140027_c0_seq1.path1;Name=comp140027_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=614;mismatches=0;indels=0;unknowns=0;Target=comp140027_c0_seq1 614 1 .;CDS_Target=comp140027_c0_seq1 50 3 .;locus=RLOC_00016624
Chr2	stalkie_big_nohaplotig	exon	38701156	38701769	100	+	.	Parent=comp140027_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38701158	38701205	.	+	0	Parent=comp140027_c0_seq1.mrna1
Chr2	gffcl	locus	38702219	38703014	.	+	.	ID=RLOC_00016625;geneIDs=comp115452_c0_seq1.path1;transcripts=comp115452_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38702219	38703014	.	+	.	ID=comp115452_c0_seq1.mrna1;geneID=comp115452_c0_seq1.path1;Name=comp115452_c0_seq1;Dir=indeterminatecoverage=94.2;identity=99.5;matches=792;mismatches=4;indels=0;unknowns=0;Target=comp115452_c0_seq1 796 1 .;CDS_Target=comp115452_c0_seq1 128 3 .;locus=RLOC_00016625
Chr2	stalkie_big_nohaplotig	exon	38702219	38703014	99	+	.	Parent=comp115452_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38702221	38702346	.	+	0	Parent=comp115452_c0_seq1.mrna1
Chr2	gffcl	locus	38705820	38705867	.	-	.	ID=RLOC_00016626;geneIDs=comp68228_c0_seq1.path1;transcripts=comp68228_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38705820	38705867	.	-	.	ID=comp68228_c0_seq1.mrna1;geneID=comp68228_c0_seq1.path1;Name=comp68228_c0_seq1;Dir=indeterminatecoverage=11.6;identity=100.0;matches=48;mismatches=0;indels=0;unknowns=0;Target=comp68228_c0_seq1 48 1 .;locus=RLOC_00016626
Chr2	stalkie_big_nohaplotig	exon	38705820	38705867	100	-	.	Parent=comp68228_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38705820	38705867	.	-	0	Parent=comp68228_c0_seq1.mrna1
Chr2	gffcl	locus	38705880	38708932	.	-	.	ID=RLOC_00016627;geneIDs=FBgn0034570.path1,comp160046_c1_seq1.path1;transcripts=FBgn0034570.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38705880	38708932	.	-	.	ID=FBgn0034570.mrna1;geneID=FBgn0034570.path1;Name=FBgn0034570;Dir=sensecoverage=76.7;identity=99.7;matches=2004;mismatches=0;indels=6;unknowns=0;locus=RLOC_00016627
Chr2	stalkie_big_nohaplotig	exon	38705880	38706532	99	-	.	Parent=FBgn0034570.mrna1;Target=FBgn0034570 1967 2613 +
Chr2	stalkie_big_nohaplotig	exon	38707042	38707141	100	-	.	Parent=FBgn0034570.mrna1;Target=FBgn0034570 1867 1966 +
Chr2	stalkie_big_nohaplotig	exon	38707217	38707674	100	-	.	Parent=FBgn0034570.mrna1;Target=FBgn0034570 1409 1866 +
Chr2	stalkie_big_nohaplotig	exon	38708065	38708203	100	-	.	Parent=FBgn0034570.mrna1;Target=FBgn0034570 1270 1408 +
Chr2	stalkie_big_nohaplotig	exon	38708273	38708932	100	-	.	Parent=FBgn0034570.mrna1;Target=FBgn0034570 610 1269 +
Chr2	stalkie_big_nohaplotig	CDS	38705880	38706532	.	-	2	Parent=FBgn0034570.mrna1;Target=FBgn0034570 1967 2613 +
Chr2	stalkie_big_nohaplotig	CDS	38707042	38707141	.	-	0	Parent=FBgn0034570.mrna1;Target=FBgn0034570 1867 1966 +
Chr2	stalkie_big_nohaplotig	CDS	38707217	38707674	.	-	2	Parent=FBgn0034570.mrna1;Target=FBgn0034570 1409 1866 +
Chr2	stalkie_big_nohaplotig	CDS	38708065	38708203	.	-	0	Parent=FBgn0034570.mrna1;Target=FBgn0034570 1270 1408 +
Chr2	stalkie_big_nohaplotig	CDS	38708273	38708932	.	-	0	Parent=FBgn0034570.mrna1;Target=FBgn0034570 610 1269 +
Chr2	gffcl	locus	38724556	38725519	.	-	.	ID=RLOC_00016628;geneIDs=FBgn0261394.2.path1;transcripts=FBgn0261394.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38724556	38725519	.	-	.	ID=FBgn0261394.2.mrna1;geneID=FBgn0261394.2.path1;Name=FBgn0261394.2;Dir=sensecoverage=100.0;identity=99.9;matches=809;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016628
Chr2	stalkie_big_nohaplotig	exon	38724556	38725123	100	-	.	Parent=FBgn0261394.2.mrna1;Target=FBgn0261394.2 243 810 +
Chr2	stalkie_big_nohaplotig	exon	38725181	38725389	99	-	.	Parent=FBgn0261394.2.mrna1;Target=FBgn0261394.2 34 242 +
Chr2	stalkie_big_nohaplotig	exon	38725487	38725519	100	-	.	Parent=FBgn0261394.2.mrna1;Target=FBgn0261394.2 1 33 +
Chr2	stalkie_big_nohaplotig	CDS	38724556	38725123	.	-	1	Parent=FBgn0261394.2.mrna1;Target=FBgn0261394.2 243 810 +
Chr2	stalkie_big_nohaplotig	CDS	38725181	38725389	.	-	0	Parent=FBgn0261394.2.mrna1;Target=FBgn0261394.2 34 242 +
Chr2	stalkie_big_nohaplotig	CDS	38725487	38725519	.	-	0	Parent=FBgn0261394.2.mrna1;Target=FBgn0261394.2 1 33 +
Chr2	gffcl	locus	38725738	38728766	.	+	.	ID=RLOC_00016629;geneIDs=FBgn0034569.1.path1;transcripts=FBgn0034569.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38725738	38728766	.	+	.	ID=FBgn0034569.1.mrna1;geneID=FBgn0034569.1.path1;Name=FBgn0034569.1;Dir=sensecoverage=100.0;identity=99.8;matches=1757;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016629
Chr2	stalkie_big_nohaplotig	exon	38725738	38725785	100	+	.	Parent=FBgn0034569.1.mrna1;Target=FBgn0034569.1 1 48 +
Chr2	stalkie_big_nohaplotig	exon	38725843	38726162	99	+	.	Parent=FBgn0034569.1.mrna1;Target=FBgn0034569.1 49 368 +
Chr2	stalkie_big_nohaplotig	exon	38726225	38726402	100	+	.	Parent=FBgn0034569.1.mrna1;Target=FBgn0034569.1 369 546 +
Chr2	stalkie_big_nohaplotig	exon	38726455	38726565	100	+	.	Parent=FBgn0034569.1.mrna1;Target=FBgn0034569.1 547 657 +
Chr2	stalkie_big_nohaplotig	exon	38726636	38726706	98	+	.	Parent=FBgn0034569.1.mrna1;Target=FBgn0034569.1 658 728 +
Chr2	stalkie_big_nohaplotig	exon	38726769	38727434	99	+	.	Parent=FBgn0034569.1.mrna1;Target=FBgn0034569.1 729 1394 +
Chr2	stalkie_big_nohaplotig	exon	38727489	38727666	100	+	.	Parent=FBgn0034569.1.mrna1;Target=FBgn0034569.1 1395 1572 +
Chr2	stalkie_big_nohaplotig	exon	38728578	38728766	100	+	.	Parent=FBgn0034569.1.mrna1;Target=FBgn0034569.1 1573 1761 +
Chr2	stalkie_big_nohaplotig	CDS	38725738	38725785	.	+	0	Parent=FBgn0034569.1.mrna1;Target=FBgn0034569.1 1 48 +
Chr2	stalkie_big_nohaplotig	CDS	38725843	38726162	.	+	0	Parent=FBgn0034569.1.mrna1;Target=FBgn0034569.1 49 368 +
Chr2	stalkie_big_nohaplotig	CDS	38726225	38726402	.	+	1	Parent=FBgn0034569.1.mrna1;Target=FBgn0034569.1 369 546 +
Chr2	stalkie_big_nohaplotig	CDS	38726455	38726565	.	+	0	Parent=FBgn0034569.1.mrna1;Target=FBgn0034569.1 547 657 +
Chr2	stalkie_big_nohaplotig	CDS	38726636	38726706	.	+	0	Parent=FBgn0034569.1.mrna1;Target=FBgn0034569.1 658 728 +
Chr2	stalkie_big_nohaplotig	CDS	38726769	38727434	.	+	1	Parent=FBgn0034569.1.mrna1;Target=FBgn0034569.1 729 1394 +
Chr2	stalkie_big_nohaplotig	CDS	38727489	38727666	.	+	1	Parent=FBgn0034569.1.mrna1;Target=FBgn0034569.1 1395 1572 +
Chr2	stalkie_big_nohaplotig	CDS	38728578	38728766	.	+	0	Parent=FBgn0034569.1.mrna1;Target=FBgn0034569.1 1573 1761 +
Chr2	gffcl	locus	38744328	38749885	.	+	.	ID=RLOC_00016630;geneIDs=FBgn0034568.path1;transcripts=FBgn0034568.mrna1,FBgn0034568.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38744328	38749885	.	+	.	ID=FBgn0034568.mrna1;geneID=FBgn0034568.path1;Name=FBgn0034568;Dir=sensecoverage=100.0;identity=99.8;matches=1087;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016630
Chr2	stalkie_big_nohaplotig	exon	38744328	38744625	100	+	.	Parent=FBgn0034568.mrna1;Target=FBgn0034568 1 298 +
Chr2	stalkie_big_nohaplotig	exon	38744712	38744821	100	+	.	Parent=FBgn0034568.mrna1;Target=FBgn0034568 299 408 +
Chr2	stalkie_big_nohaplotig	exon	38747265	38747453	100	+	.	Parent=FBgn0034568.mrna1;Target=FBgn0034568 409 597 +
Chr2	stalkie_big_nohaplotig	exon	38747511	38747767	100	+	.	Parent=FBgn0034568.mrna1;Target=FBgn0034568 598 854 +
Chr2	stalkie_big_nohaplotig	exon	38747837	38747952	100	+	.	Parent=FBgn0034568.mrna1;Target=FBgn0034568 855 970 +
Chr2	stalkie_big_nohaplotig	exon	38748011	38748089	98	+	.	Parent=FBgn0034568.mrna1;Target=FBgn0034568 971 1049 +
Chr2	stalkie_big_nohaplotig	exon	38748216	38748255	97	+	.	Parent=FBgn0034568.mrna1;Target=FBgn0034568 1050 1089 +
Chr2	stalkie_big_nohaplotig	exon	38749231	38749600	99	+	.	Parent=FBgn0034568.mrna1;Target=FBgn0034568 1 370 +
Chr2	stalkie_big_nohaplotig	exon	38749668	38749885	100	+	.	Parent=FBgn0034568.mrna1;Target=FBgn0034568 371 588 +
Chr2	stalkie_big_nohaplotig	CDS	38744328	38744625	.	+	0	Parent=FBgn0034568.mrna1;Target=FBgn0034568 1 298 +
Chr2	stalkie_big_nohaplotig	CDS	38744712	38744821	.	+	2	Parent=FBgn0034568.mrna1;Target=FBgn0034568 299 408 +
Chr2	stalkie_big_nohaplotig	CDS	38747265	38747453	.	+	0	Parent=FBgn0034568.mrna1;Target=FBgn0034568 409 597 +
Chr2	stalkie_big_nohaplotig	CDS	38747511	38747767	.	+	0	Parent=FBgn0034568.mrna1;Target=FBgn0034568 598 854 +
Chr2	stalkie_big_nohaplotig	CDS	38747837	38747952	.	+	1	Parent=FBgn0034568.mrna1;Target=FBgn0034568 855 970 +
Chr2	stalkie_big_nohaplotig	CDS	38748011	38748089	.	+	2	Parent=FBgn0034568.mrna1;Target=FBgn0034568 971 1049 +
Chr2	stalkie_big_nohaplotig	CDS	38748216	38748255	.	+	1	Parent=FBgn0034568.mrna1;Target=FBgn0034568 1050 1089 +
Chr2	stalkie_big_nohaplotig	CDS	38749231	38749600	.	+	0	Parent=FBgn0034568.mrna1;Target=FBgn0034568 1 370 +
Chr2	stalkie_big_nohaplotig	CDS	38749668	38749885	.	+	2	Parent=FBgn0034568.mrna1;Target=FBgn0034568 371 588 +
Chr2	stalkie_big_nohaplotig	mRNA	38749231	38749885	.	+	.	ID=FBgn0034568.mrna1;geneID=FBgn0034568.path1;Name=FBgn0034568;Dir=sensecoverage=100.0;identity=99.7;matches=586;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016630
Chr2	stalkie_big_nohaplotig	exon	38749231	38749885	.	+	.	Parent=FBgn0034568.mrna1
Chr2	gffcl	locus	38753160	38756062	.	+	.	ID=RLOC_00016631;geneIDs=FBgn0034567.1.path1;transcripts=FBgn0034567.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38753160	38756062	.	+	.	ID=FBgn0034567.1.mrna1;geneID=FBgn0034567.1.path1;Name=FBgn0034567.1;Dir=sensecoverage=100.0;identity=99.8;matches=1728;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016631
Chr2	stalkie_big_nohaplotig	exon	38753160	38753936	99	+	.	Parent=FBgn0034567.1.mrna1;Target=FBgn0034567.1 1 777 +
Chr2	stalkie_big_nohaplotig	exon	38755048	38755164	100	+	.	Parent=FBgn0034567.1.mrna1;Target=FBgn0034567.1 778 894 +
Chr2	stalkie_big_nohaplotig	exon	38755226	38756062	99	+	.	Parent=FBgn0034567.1.mrna1;Target=FBgn0034567.1 895 1731 +
Chr2	stalkie_big_nohaplotig	CDS	38753160	38753936	.	+	0	Parent=FBgn0034567.1.mrna1;Target=FBgn0034567.1 1 777 +
Chr2	stalkie_big_nohaplotig	CDS	38755048	38755164	.	+	0	Parent=FBgn0034567.1.mrna1;Target=FBgn0034567.1 778 894 +
Chr2	stalkie_big_nohaplotig	CDS	38755226	38756062	.	+	0	Parent=FBgn0034567.1.mrna1;Target=FBgn0034567.1 895 1731 +
Chr2	gffcl	locus	38773879	38774927	.	+	.	ID=RLOC_00016632;geneIDs=comp129711_c1_seq1.path1;transcripts=comp129711_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38773879	38774927	.	+	.	ID=comp129711_c1_seq1.mrna1;geneID=comp129711_c1_seq1.path1;Name=comp129711_c1_seq1;Dir=indeterminatecoverage=98.7;identity=96.4;matches=993;mismatches=5;indels=32;unknowns=0;locus=RLOC_00016632
Chr2	stalkie_big_nohaplotig	exon	38773879	38774513	94	+	.	Parent=comp129711_c1_seq1.mrna1;Target=comp129711_c1_seq1 681 15 .
Chr2	stalkie_big_nohaplotig	exon	38774565	38774927	99	+	.	Parent=comp129711_c1_seq1.mrna1;Target=comp129711_c1_seq1 1044 682 .
Chr2	stalkie_big_nohaplotig	CDS	38774351	38774513	.	+	0	Parent=comp129711_c1_seq1.mrna1;Target=comp129711_c1_seq1 681 487 .
Chr2	stalkie_big_nohaplotig	CDS	38774565	38774579	.	+	2	Parent=comp129711_c1_seq1.mrna1;Target=comp129711_c1_seq1 696 682 .
Chr2	gffcl	locus	38776570	38779405	.	-	.	ID=RLOC_00016633;geneIDs=comp160484_c0_seq1.path1;transcripts=comp160484_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38776570	38779405	.	-	.	ID=comp160484_c0_seq1.mrna1;geneID=comp160484_c0_seq1.path1;Name=comp160484_c0_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=1649;mismatches=4;indels=11;unknowns=0;Target=comp160484_c0_seq1 1431 1604 .;locus=RLOC_00016633
Chr2	stalkie_big_nohaplotig	exon	38776570	38777607	98	-	.	Parent=comp160484_c0_seq1.mrna1;Target=comp160484_c0_seq1 1 1049 -
Chr2	stalkie_big_nohaplotig	exon	38778699	38778842	100	-	.	Parent=comp160484_c0_seq1.mrna1;Target=comp160484_c0_seq1 1050 1193 -
Chr2	stalkie_big_nohaplotig	exon	38778935	38779405	100	-	.	Parent=comp160484_c0_seq1.mrna1;Target=comp160484_c0_seq1 1194 1664 -
Chr2	stalkie_big_nohaplotig	CDS	38779172	38779345	.	-	0	Parent=comp160484_c0_seq1.mrna1
Chr2	gffcl	locus	38787264	38788281	.	-	.	ID=RLOC_00016634;geneIDs=FBgn0039943.1.path1;transcripts=FBgn0039943.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38787264	38788281	.	-	.	ID=FBgn0039943.1.mrna1;geneID=FBgn0039943.1.path1;Name=FBgn0039943.1;Dir=indeterminatecoverage=94.7;identity=95.0;matches=967;mismatches=50;indels=1;unknowns=0;Target=FBgn0039943.1 1017 1 .;CDS_Target=FBgn0039943.1 16 2 .;locus=RLOC_00016634
Chr2	stalkie_big_nohaplotig	exon	38787264	38788281	94	-	.	Parent=FBgn0039943.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38788265	38788280	.	-	0	Parent=FBgn0039943.1.mrna1
Chr2	gffcl	locus	38800627	38802038	.	+	.	ID=RLOC_00016635;geneIDs=FBgn0025716.1.path1;transcripts=FBgn0025716.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38800627	38802038	.	+	.	ID=FBgn0025716.1.mrna1;geneID=FBgn0025716.1.path1;Name=FBgn0025716.1;Dir=sensecoverage=100.0;identity=98.8;matches=1275;mismatches=15;indels=0;unknowns=0;locus=RLOC_00016635
Chr2	stalkie_big_nohaplotig	exon	38800627	38800840	99	+	.	Parent=FBgn0025716.1.mrna1;Target=FBgn0025716.1 1 214 +
Chr2	stalkie_big_nohaplotig	exon	38800900	38801742	98	+	.	Parent=FBgn0025716.1.mrna1;Target=FBgn0025716.1 215 1057 +
Chr2	stalkie_big_nohaplotig	exon	38801806	38802038	98	+	.	Parent=FBgn0025716.1.mrna1;Target=FBgn0025716.1 1058 1290 +
Chr2	stalkie_big_nohaplotig	CDS	38800627	38800840	.	+	0	Parent=FBgn0025716.1.mrna1;Target=FBgn0025716.1 1 214 +
Chr2	stalkie_big_nohaplotig	CDS	38800900	38801742	.	+	2	Parent=FBgn0025716.1.mrna1;Target=FBgn0025716.1 215 1057 +
Chr2	stalkie_big_nohaplotig	CDS	38801806	38802038	.	+	2	Parent=FBgn0025716.1.mrna1;Target=FBgn0025716.1 1058 1290 +
Chr2	gffcl	locus	38802349	38803589	.	-	.	ID=RLOC_00016636;geneIDs=FBgn0034215.4.path1;transcripts=FBgn0034215.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38802349	38803589	.	-	.	ID=FBgn0034215.4.mrna1;geneID=FBgn0034215.4.path1;Name=FBgn0034215.4;Dir=sensecoverage=100.0;identity=99.5;matches=1033;mismatches=3;indels=2;unknowns=0;Target=FBgn0034215.4 2 40 +;locus=RLOC_00016636
Chr2	stalkie_big_nohaplotig	exon	38802349	38802381	96	-	.	Parent=FBgn0034215.4.mrna1;Target=FBgn0034215.4 1006 1038 +
Chr2	stalkie_big_nohaplotig	exon	38802442	38803221	99	-	.	Parent=FBgn0034215.4.mrna1;Target=FBgn0034215.4 226 1005 +
Chr2	stalkie_big_nohaplotig	exon	38803367	38803589	98	-	.	Parent=FBgn0034215.4.mrna1;Target=FBgn0034215.4 1 225 +
Chr2	stalkie_big_nohaplotig	CDS	38803552	38803588	.	-	0	Parent=FBgn0034215.4.mrna1
Chr2	gffcl	locus	38803924	38804948	.	-	.	ID=RLOC_00016637;geneIDs=FBgn0034215.5.path1;transcripts=FBgn0034215.5.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38803924	38804948	.	-	.	ID=FBgn0034215.5.mrna1;geneID=FBgn0034215.5.path1;Name=FBgn0034215.5;Dir=sensecoverage=100.0;identity=99.4;matches=880;mismatches=5;indels=0;unknowns=0;locus=RLOC_00016637
Chr2	stalkie_big_nohaplotig	exon	38803924	38803959	100	-	.	Parent=FBgn0034215.5.mrna1;Target=FBgn0034215.5 850 885 +
Chr2	stalkie_big_nohaplotig	exon	38804024	38804803	99	-	.	Parent=FBgn0034215.5.mrna1;Target=FBgn0034215.5 70 849 +
Chr2	stalkie_big_nohaplotig	exon	38804880	38804948	100	-	.	Parent=FBgn0034215.5.mrna1;Target=FBgn0034215.5 1 69 +
Chr2	stalkie_big_nohaplotig	CDS	38803924	38803959	.	-	0	Parent=FBgn0034215.5.mrna1;Target=FBgn0034215.5 850 885 +
Chr2	stalkie_big_nohaplotig	CDS	38804024	38804803	.	-	0	Parent=FBgn0034215.5.mrna1;Target=FBgn0034215.5 70 849 +
Chr2	stalkie_big_nohaplotig	CDS	38804880	38804948	.	-	0	Parent=FBgn0034215.5.mrna1;Target=FBgn0034215.5 1 69 +
Chr2	gffcl	locus	38811773	38823363	.	-	.	ID=RLOC_00016638;geneIDs=FBgn0052438.1.path1;transcripts=FBgn0052438.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38811773	38823363	.	-	.	ID=FBgn0052438.1.mrna1;geneID=FBgn0052438.1.path1;Name=FBgn0052438.1;Dir=sensecoverage=100.0;identity=99.6;matches=2420;mismatches=9;indels=1;unknowns=0;locus=RLOC_00016638
Chr2	stalkie_big_nohaplotig	exon	38811773	38811864	98	-	.	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 2338 2430 +
Chr2	stalkie_big_nohaplotig	exon	38814456	38814673	100	-	.	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 2120 2337 +
Chr2	stalkie_big_nohaplotig	exon	38815417	38815622	100	-	.	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 1914 2119 +
Chr2	stalkie_big_nohaplotig	exon	38815690	38815816	98	-	.	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 1787 1913 +
Chr2	stalkie_big_nohaplotig	exon	38815883	38816046	99	-	.	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 1623 1786 +
Chr2	stalkie_big_nohaplotig	exon	38816099	38816307	100	-	.	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 1414 1622 +
Chr2	stalkie_big_nohaplotig	exon	38816364	38816465	100	-	.	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 1312 1413 +
Chr2	stalkie_big_nohaplotig	exon	38816520	38816807	100	-	.	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 1024 1311 +
Chr2	stalkie_big_nohaplotig	exon	38819818	38819916	100	-	.	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 925 1023 +
Chr2	stalkie_big_nohaplotig	exon	38819977	38820223	98	-	.	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 678 924 +
Chr2	stalkie_big_nohaplotig	exon	38821605	38821783	100	-	.	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 499 677 +
Chr2	stalkie_big_nohaplotig	exon	38821853	38822225	99	-	.	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 126 498 +
Chr2	stalkie_big_nohaplotig	exon	38823239	38823363	100	-	.	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 1 125 +
Chr2	stalkie_big_nohaplotig	CDS	38811773	38811864	.	-	0	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 2338 2430 +
Chr2	stalkie_big_nohaplotig	CDS	38814456	38814673	.	-	2	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 2120 2337 +
Chr2	stalkie_big_nohaplotig	CDS	38815417	38815622	.	-	1	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 1914 2119 +
Chr2	stalkie_big_nohaplotig	CDS	38815690	38815816	.	-	2	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 1787 1913 +
Chr2	stalkie_big_nohaplotig	CDS	38815883	38816046	.	-	1	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 1623 1786 +
Chr2	stalkie_big_nohaplotig	CDS	38816099	38816307	.	-	0	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 1414 1622 +
Chr2	stalkie_big_nohaplotig	CDS	38816364	38816465	.	-	0	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 1312 1413 +
Chr2	stalkie_big_nohaplotig	CDS	38816520	38816807	.	-	0	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 1024 1311 +
Chr2	stalkie_big_nohaplotig	CDS	38819818	38819916	.	-	0	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 925 1023 +
Chr2	stalkie_big_nohaplotig	CDS	38819977	38820223	.	-	1	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 678 924 +
Chr2	stalkie_big_nohaplotig	CDS	38821605	38821783	.	-	0	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 499 677 +
Chr2	stalkie_big_nohaplotig	CDS	38821853	38822225	.	-	1	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 126 498 +
Chr2	stalkie_big_nohaplotig	CDS	38823239	38823363	.	-	0	Parent=FBgn0052438.1.mrna1;Target=FBgn0052438.1 1 125 +
Chr2	gffcl	locus	38824554	38825390	.	+	.	ID=RLOC_00016639;geneIDs=FBgn0034217.1.path1;transcripts=FBgn0034217.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38824554	38825390	.	+	.	ID=FBgn0034217.1.mrna1;geneID=FBgn0034217.1.path1;Name=FBgn0034217.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=837;mismatches=0;indels=0;unknowns=0;Target=FBgn0034217.1 837 1 .;locus=RLOC_00016639
Chr2	stalkie_big_nohaplotig	exon	38824554	38825390	100	+	.	Parent=FBgn0034217.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38824554	38825390	.	+	0	Parent=FBgn0034217.1.mrna1
Chr2	gffcl	locus	38829489	38847475	.	-	.	ID=RLOC_00016640;geneIDs=FBgn0027506.1.path1;transcripts=FBgn0027506.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38829489	38847475	.	-	.	ID=FBgn0027506.1.mrna1;geneID=FBgn0027506.1.path1;Name=FBgn0027506.1;Dir=sensecoverage=100.0;identity=99.9;matches=2193;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016640
Chr2	stalkie_big_nohaplotig	exon	38829489	38829621	100	-	.	Parent=FBgn0027506.1.mrna1;Target=FBgn0027506.1 2064 2196 +
Chr2	stalkie_big_nohaplotig	exon	38829689	38829973	100	-	.	Parent=FBgn0027506.1.mrna1;Target=FBgn0027506.1 1779 2063 +
Chr2	stalkie_big_nohaplotig	exon	38830486	38830644	100	-	.	Parent=FBgn0027506.1.mrna1;Target=FBgn0027506.1 1620 1778 +
Chr2	stalkie_big_nohaplotig	exon	38830726	38830809	100	-	.	Parent=FBgn0027506.1.mrna1;Target=FBgn0027506.1 1536 1619 +
Chr2	stalkie_big_nohaplotig	exon	38830866	38831417	99	-	.	Parent=FBgn0027506.1.mrna1;Target=FBgn0027506.1 984 1535 +
Chr2	stalkie_big_nohaplotig	exon	38831483	38832318	99	-	.	Parent=FBgn0027506.1.mrna1;Target=FBgn0027506.1 148 983 +
Chr2	stalkie_big_nohaplotig	exon	38847329	38847475	99	-	.	Parent=FBgn0027506.1.mrna1;Target=FBgn0027506.1 1 147 +
Chr2	stalkie_big_nohaplotig	CDS	38829489	38829621	.	-	1	Parent=FBgn0027506.1.mrna1;Target=FBgn0027506.1 2064 2196 +
Chr2	stalkie_big_nohaplotig	CDS	38829689	38829973	.	-	1	Parent=FBgn0027506.1.mrna1;Target=FBgn0027506.1 1779 2063 +
Chr2	stalkie_big_nohaplotig	CDS	38830486	38830644	.	-	1	Parent=FBgn0027506.1.mrna1;Target=FBgn0027506.1 1620 1778 +
Chr2	stalkie_big_nohaplotig	CDS	38830726	38830809	.	-	1	Parent=FBgn0027506.1.mrna1;Target=FBgn0027506.1 1536 1619 +
Chr2	stalkie_big_nohaplotig	CDS	38830866	38831417	.	-	1	Parent=FBgn0027506.1.mrna1;Target=FBgn0027506.1 984 1535 +
Chr2	stalkie_big_nohaplotig	CDS	38831483	38832318	.	-	0	Parent=FBgn0027506.1.mrna1;Target=FBgn0027506.1 148 983 +
Chr2	stalkie_big_nohaplotig	CDS	38847329	38847475	.	-	0	Parent=FBgn0027506.1.mrna1;Target=FBgn0027506.1 1 147 +
Chr2	gffcl	locus	38850601	38851215	.	+	.	ID=RLOC_00016641;geneIDs=comp135513_c0_seq1.path1;transcripts=comp135513_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38850601	38851215	.	+	.	ID=comp135513_c0_seq1.mrna1;geneID=comp135513_c0_seq1.path1;Name=comp135513_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=611;mismatches=3;indels=1;unknowns=0;Target=comp135513_c0_seq1 614 1 .;CDS_Target=comp135513_c0_seq1 525 475 .;locus=RLOC_00016641
Chr2	stalkie_big_nohaplotig	exon	38850601	38851215	99	+	.	Parent=comp135513_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38851076	38851126	.	+	0	Parent=comp135513_c0_seq1.mrna1
Chr2	gffcl	locus	38852158	38856399	.	-	.	ID=RLOC_00016642;geneIDs=FBgn0033738.1.path1;transcripts=FBgn0033738.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38852158	38856399	.	-	.	ID=FBgn0033738.1.mrna1;geneID=FBgn0033738.1.path1;Name=FBgn0033738.1;Dir=sensecoverage=100.0;identity=100.0;matches=2534;mismatches=0;indels=0;unknowns=1;locus=RLOC_00016642
Chr2	stalkie_big_nohaplotig	exon	38852158	38852784	100	-	.	Parent=FBgn0033738.1.mrna1;Target=FBgn0033738.1 1909 2535 +
Chr2	stalkie_big_nohaplotig	exon	38854250	38854644	100	-	.	Parent=FBgn0033738.1.mrna1;Target=FBgn0033738.1 1514 1908 +
Chr2	stalkie_big_nohaplotig	exon	38854707	38854999	100	-	.	Parent=FBgn0033738.1.mrna1;Target=FBgn0033738.1 1221 1513 +
Chr2	stalkie_big_nohaplotig	exon	38855059	38855243	100	-	.	Parent=FBgn0033738.1.mrna1;Target=FBgn0033738.1 1036 1220 +
Chr2	stalkie_big_nohaplotig	exon	38855305	38855454	100	-	.	Parent=FBgn0033738.1.mrna1;Target=FBgn0033738.1 886 1035 +
Chr2	stalkie_big_nohaplotig	exon	38855515	38856399	100	-	.	Parent=FBgn0033738.1.mrna1;Target=FBgn0033738.1 1 885 +
Chr2	stalkie_big_nohaplotig	CDS	38852158	38852784	.	-	0	Parent=FBgn0033738.1.mrna1;Target=FBgn0033738.1 1909 2535 +
Chr2	stalkie_big_nohaplotig	CDS	38854250	38854644	.	-	2	Parent=FBgn0033738.1.mrna1;Target=FBgn0033738.1 1514 1908 +
Chr2	stalkie_big_nohaplotig	CDS	38854707	38854999	.	-	1	Parent=FBgn0033738.1.mrna1;Target=FBgn0033738.1 1221 1513 +
Chr2	stalkie_big_nohaplotig	CDS	38855059	38855243	.	-	0	Parent=FBgn0033738.1.mrna1;Target=FBgn0033738.1 1036 1220 +
Chr2	stalkie_big_nohaplotig	CDS	38855305	38855454	.	-	0	Parent=FBgn0033738.1.mrna1;Target=FBgn0033738.1 886 1035 +
Chr2	stalkie_big_nohaplotig	CDS	38855515	38856399	.	-	0	Parent=FBgn0033738.1.mrna1;Target=FBgn0033738.1 1 885 +
Chr2	gffcl	locus	38858165	38860527	.	+	.	ID=RLOC_00016643;geneIDs=FBgn0050051.1.path1;transcripts=FBgn0050051.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38858165	38860527	.	+	.	ID=FBgn0050051.1.mrna1;geneID=FBgn0050051.1.path1;Name=FBgn0050051.1;Dir=sensecoverage=100.0;identity=100.0;matches=453;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016643
Chr2	stalkie_big_nohaplotig	exon	38858165	38858233	100	+	.	Parent=FBgn0050051.1.mrna1;Target=FBgn0050051.1 1 69 +
Chr2	stalkie_big_nohaplotig	exon	38858366	38858483	100	+	.	Parent=FBgn0050051.1.mrna1;Target=FBgn0050051.1 70 187 +
Chr2	stalkie_big_nohaplotig	exon	38858557	38858646	100	+	.	Parent=FBgn0050051.1.mrna1;Target=FBgn0050051.1 188 277 +
Chr2	stalkie_big_nohaplotig	exon	38860293	38860351	100	+	.	Parent=FBgn0050051.1.mrna1;Target=FBgn0050051.1 278 336 +
Chr2	stalkie_big_nohaplotig	exon	38860411	38860527	100	+	.	Parent=FBgn0050051.1.mrna1;Target=FBgn0050051.1 337 453 +
Chr2	stalkie_big_nohaplotig	CDS	38858165	38858233	.	+	0	Parent=FBgn0050051.1.mrna1;Target=FBgn0050051.1 1 69 +
Chr2	stalkie_big_nohaplotig	CDS	38858366	38858483	.	+	0	Parent=FBgn0050051.1.mrna1;Target=FBgn0050051.1 70 187 +
Chr2	stalkie_big_nohaplotig	CDS	38858557	38858646	.	+	2	Parent=FBgn0050051.1.mrna1;Target=FBgn0050051.1 188 277 +
Chr2	stalkie_big_nohaplotig	CDS	38860293	38860351	.	+	2	Parent=FBgn0050051.1.mrna1;Target=FBgn0050051.1 278 336 +
Chr2	stalkie_big_nohaplotig	CDS	38860411	38860527	.	+	0	Parent=FBgn0050051.1.mrna1;Target=FBgn0050051.1 337 453 +
Chr2	gffcl	locus	38865269	38894897	.	+	.	ID=RLOC_00016644;geneIDs=FBgn0017558.1.path1;transcripts=FBgn0017558.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38865269	38894897	.	+	.	ID=FBgn0017558.1.mrna1;geneID=FBgn0017558.1.path1;Name=FBgn0017558.1;Dir=sensecoverage=100.0;identity=100.0;matches=1335;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016644
Chr2	stalkie_big_nohaplotig	exon	38865269	38865467	100	+	.	Parent=FBgn0017558.1.mrna1;Target=FBgn0017558.1 1 199 +
Chr2	stalkie_big_nohaplotig	exon	38888666	38888873	100	+	.	Parent=FBgn0017558.1.mrna1;Target=FBgn0017558.1 200 407 +
Chr2	stalkie_big_nohaplotig	exon	38889477	38889667	100	+	.	Parent=FBgn0017558.1.mrna1;Target=FBgn0017558.1 408 598 +
Chr2	stalkie_big_nohaplotig	exon	38889740	38890089	100	+	.	Parent=FBgn0017558.1.mrna1;Target=FBgn0017558.1 599 948 +
Chr2	stalkie_big_nohaplotig	exon	38890164	38890388	100	+	.	Parent=FBgn0017558.1.mrna1;Target=FBgn0017558.1 949 1173 +
Chr2	stalkie_big_nohaplotig	exon	38890455	38890553	100	+	.	Parent=FBgn0017558.1.mrna1;Target=FBgn0017558.1 1174 1272 +
Chr2	stalkie_big_nohaplotig	exon	38894835	38894897	100	+	.	Parent=FBgn0017558.1.mrna1;Target=FBgn0017558.1 1273 1335 +
Chr2	stalkie_big_nohaplotig	CDS	38865269	38865467	.	+	0	Parent=FBgn0017558.1.mrna1;Target=FBgn0017558.1 1 199 +
Chr2	stalkie_big_nohaplotig	CDS	38888666	38888873	.	+	2	Parent=FBgn0017558.1.mrna1;Target=FBgn0017558.1 200 407 +
Chr2	stalkie_big_nohaplotig	CDS	38889477	38889667	.	+	1	Parent=FBgn0017558.1.mrna1;Target=FBgn0017558.1 408 598 +
Chr2	stalkie_big_nohaplotig	CDS	38889740	38890089	.	+	2	Parent=FBgn0017558.1.mrna1;Target=FBgn0017558.1 599 948 +
Chr2	stalkie_big_nohaplotig	CDS	38890164	38890388	.	+	0	Parent=FBgn0017558.1.mrna1;Target=FBgn0017558.1 949 1173 +
Chr2	stalkie_big_nohaplotig	CDS	38890455	38890553	.	+	0	Parent=FBgn0017558.1.mrna1;Target=FBgn0017558.1 1174 1272 +
Chr2	stalkie_big_nohaplotig	CDS	38894835	38894897	.	+	0	Parent=FBgn0017558.1.mrna1;Target=FBgn0017558.1 1273 1335 +
Chr2	gffcl	locus	38896033	38899468	.	-	.	ID=RLOC_00016645;geneIDs=FBgn0029092.1.path1;transcripts=FBgn0029092.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38896033	38899468	.	-	.	ID=FBgn0029092.1.mrna1;geneID=FBgn0029092.1.path1;Name=FBgn0029092.1;Dir=sensecoverage=100.0;identity=100.0;matches=1407;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016645
Chr2	stalkie_big_nohaplotig	exon	38896033	38896095	100	-	.	Parent=FBgn0029092.1.mrna1;Target=FBgn0029092.1 1345 1407 +
Chr2	stalkie_big_nohaplotig	exon	38897817	38897983	100	-	.	Parent=FBgn0029092.1.mrna1;Target=FBgn0029092.1 1178 1344 +
Chr2	stalkie_big_nohaplotig	exon	38898046	38898417	100	-	.	Parent=FBgn0029092.1.mrna1;Target=FBgn0029092.1 806 1177 +
Chr2	stalkie_big_nohaplotig	exon	38898502	38898728	100	-	.	Parent=FBgn0029092.1.mrna1;Target=FBgn0029092.1 579 805 +
Chr2	stalkie_big_nohaplotig	exon	38898790	38899238	100	-	.	Parent=FBgn0029092.1.mrna1;Target=FBgn0029092.1 130 578 +
Chr2	stalkie_big_nohaplotig	exon	38899340	38899468	100	-	.	Parent=FBgn0029092.1.mrna1;Target=FBgn0029092.1 1 129 +
Chr2	stalkie_big_nohaplotig	CDS	38896033	38896095	.	-	0	Parent=FBgn0029092.1.mrna1;Target=FBgn0029092.1 1345 1407 +
Chr2	stalkie_big_nohaplotig	CDS	38897817	38897983	.	-	2	Parent=FBgn0029092.1.mrna1;Target=FBgn0029092.1 1178 1344 +
Chr2	stalkie_big_nohaplotig	CDS	38898046	38898417	.	-	2	Parent=FBgn0029092.1.mrna1;Target=FBgn0029092.1 806 1177 +
Chr2	stalkie_big_nohaplotig	CDS	38898502	38898728	.	-	1	Parent=FBgn0029092.1.mrna1;Target=FBgn0029092.1 579 805 +
Chr2	stalkie_big_nohaplotig	CDS	38898790	38899238	.	-	0	Parent=FBgn0029092.1.mrna1;Target=FBgn0029092.1 130 578 +
Chr2	stalkie_big_nohaplotig	CDS	38899340	38899468	.	-	0	Parent=FBgn0029092.1.mrna1;Target=FBgn0029092.1 1 129 +
Chr2	stalkie_big_nohaplotig	mRNA	38922542	40887267	.	-	.	ID=comp163067_c0_seq1.mrna1;geneID=comp163067_c0_seq1.path1;Name=comp163067_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.3;matches=3122;mismatches=12;indels=10;unknowns=0;Target=comp163067_c0_seq1 2490 2284 .;locus=RLOC_00016646
Chr2	stalkie_big_nohaplotig	exon	38922542	38922556	100	-	.	Parent=comp163067_c0_seq1.mrna1;Target=comp163067_c0_seq1 3144 3130 .
Chr2	stalkie_big_nohaplotig	exon	38929646	38929647	100	-	.	Parent=comp163067_c0_seq1.mrna1;Target=comp163067_c0_seq1 3129 3128 .
Chr2	stalkie_big_nohaplotig	exon	38933371	38933377	100	-	.	Parent=comp163067_c0_seq1.mrna1;Target=comp163067_c0_seq1 3127 3121 .
Chr2	stalkie_big_nohaplotig	exon	38936965	38936972	100	-	.	Parent=comp163067_c0_seq1.mrna1;Target=comp163067_c0_seq1 3120 3113 .
Chr2	stalkie_big_nohaplotig	exon	38937876	38937883	100	-	.	Parent=comp163067_c0_seq1.mrna1;Target=comp163067_c0_seq1 3112 3105 .
Chr2	stalkie_big_nohaplotig	exon	38942035	38942036	100	-	.	Parent=comp163067_c0_seq1.mrna1;Target=comp163067_c0_seq1 3104 3103 .
Chr2	stalkie_big_nohaplotig	exon	38947775	38947779	100	-	.	Parent=comp163067_c0_seq1.mrna1;Target=comp163067_c0_seq1 3102 3098 .
Chr2	stalkie_big_nohaplotig	exon	38948619	38948624	100	-	.	Parent=comp163067_c0_seq1.mrna1;Target=comp163067_c0_seq1 3097 3092 .
Chr2	stalkie_big_nohaplotig	exon	38954248	38954251	100	-	.	Parent=comp163067_c0_seq1.mrna1;Target=comp163067_c0_seq1 3091 3088 .
Chr2	stalkie_big_nohaplotig	exon	40884191	40887267	99	-	.	Parent=comp163067_c0_seq1.mrna1;Target=comp163067_c0_seq1 3087 1 .
Chr2	stalkie_big_nohaplotig	CDS	40884779	40884985	.	-	0	Parent=comp163067_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40771764	40772428	.	-	.	ID=comp151856_c0_seq1.mrna1;geneID=comp151856_c0_seq1.path1;Name=comp151856_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=661;mismatches=0;indels=4;unknowns=0;Target=comp151856_c0_seq1 661 1 .;CDS_Target=comp151856_c0_seq1 373 263 .;locus=RLOC_00016646
Chr2	stalkie_big_nohaplotig	exon	40771764	40772428	99	-	.	Parent=comp151856_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	40772056	40772166	.	-	0	Parent=comp151856_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40911209	40911896	.	-	.	ID=comp135396_c1_seq1.mrna1;geneID=comp135396_c1_seq1.path1;Name=comp135396_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=687;mismatches=1;indels=0;unknowns=0;Target=comp135396_c1_seq1 688 1 .;CDS_Target=comp135396_c1_seq1 137 3 .;locus=RLOC_00016646
Chr2	stalkie_big_nohaplotig	exon	40911209	40911896	99	-	.	Parent=comp135396_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	40911760	40911894	.	-	0	Parent=comp135396_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41422811	41444636	.	-	.	ID=FBgn0043070.1.mrna1;geneID=FBgn0043070.1.path1;Name=FBgn0043070.1;Dir=sensecoverage=100.0;identity=99.6;matches=1363;mismatches=5;indels=0;unknowns=0;locus=RLOC_00016646
Chr2	stalkie_big_nohaplotig	exon	41422811	41422893	100	-	.	Parent=FBgn0043070.1.mrna1;Target=FBgn0043070.1 1286 1368 +
Chr2	stalkie_big_nohaplotig	exon	41426429	41426513	100	-	.	Parent=FBgn0043070.1.mrna1;Target=FBgn0043070.1 1201 1285 +
Chr2	stalkie_big_nohaplotig	exon	41426581	41427145	99	-	.	Parent=FBgn0043070.1.mrna1;Target=FBgn0043070.1 636 1200 +
Chr2	stalkie_big_nohaplotig	exon	41428889	41429009	100	-	.	Parent=FBgn0043070.1.mrna1;Target=FBgn0043070.1 515 635 +
Chr2	stalkie_big_nohaplotig	exon	41429072	41429265	100	-	.	Parent=FBgn0043070.1.mrna1;Target=FBgn0043070.1 321 514 +
Chr2	stalkie_big_nohaplotig	exon	41430556	41430639	100	-	.	Parent=FBgn0043070.1.mrna1;Target=FBgn0043070.1 237 320 +
Chr2	stalkie_big_nohaplotig	exon	41444401	41444636	98	-	.	Parent=FBgn0043070.1.mrna1;Target=FBgn0043070.1 1 236 +
Chr2	stalkie_big_nohaplotig	CDS	41422811	41422893	.	-	2	Parent=FBgn0043070.1.mrna1;Target=FBgn0043070.1 1286 1368 +
Chr2	stalkie_big_nohaplotig	CDS	41426429	41426513	.	-	0	Parent=FBgn0043070.1.mrna1;Target=FBgn0043070.1 1201 1285 +
Chr2	stalkie_big_nohaplotig	CDS	41426581	41427145	.	-	1	Parent=FBgn0043070.1.mrna1;Target=FBgn0043070.1 636 1200 +
Chr2	stalkie_big_nohaplotig	CDS	41428889	41429009	.	-	2	Parent=FBgn0043070.1.mrna1;Target=FBgn0043070.1 515 635 +
Chr2	stalkie_big_nohaplotig	CDS	41429072	41429265	.	-	1	Parent=FBgn0043070.1.mrna1;Target=FBgn0043070.1 321 514 +
Chr2	stalkie_big_nohaplotig	CDS	41430556	41430639	.	-	1	Parent=FBgn0043070.1.mrna1;Target=FBgn0043070.1 237 320 +
Chr2	stalkie_big_nohaplotig	CDS	41444401	41444636	.	-	0	Parent=FBgn0043070.1.mrna1;Target=FBgn0043070.1 1 236 +
Chr2	stalkie_big_nohaplotig	mRNA	41422872	41423108	.	+	.	ID=comp222731_c0_seq1.mrna1;geneID=comp222731_c0_seq1.path1;Name=comp222731_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=236;mismatches=1;indels=0;unknowns=0;Target=comp222731_c0_seq1 237 1 .;CDS_Target=comp222731_c0_seq1 46 2 .;locus=RLOC_00016646
Chr2	stalkie_big_nohaplotig	exon	41422872	41423108	99	+	.	Parent=comp222731_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	41422873	41422917	.	+	0	Parent=comp222731_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41425986	41426451	.	-	.	ID=comp56757_c0_seq1.mrna1;geneID=comp56757_c0_seq1.path1;Name=comp56757_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=466;mismatches=0;indels=0;unknowns=0;Target=comp56757_c0_seq1 466 1 .;CDS_Target=comp56757_c0_seq1 346 266 .;locus=RLOC_00016646
Chr2	stalkie_big_nohaplotig	exon	41425986	41426451	100	-	.	Parent=comp56757_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	41426106	41426186	.	-	0	Parent=comp56757_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41430619	41431485	.	-	.	ID=comp135482_c0_seq1.mrna1;geneID=comp135482_c0_seq1.path1;Name=comp135482_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=866;mismatches=1;indels=3;unknowns=0;Target=comp135482_c0_seq1 870 1 .;CDS_Target=comp135482_c0_seq1 600 481 .;locus=RLOC_00016646
Chr2	stalkie_big_nohaplotig	exon	41430619	41431485	99	-	.	Parent=comp135482_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	41430889	41431008	.	-	0	Parent=comp135482_c0_seq1.mrna1
Chr2	gffcl	locus	38931362	38978959	.	+	.	ID=RLOC_00016647;geneIDs=comp156400_c2_seq1.path1;transcripts=comp156400_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38931362	38978959	.	+	.	ID=comp156400_c2_seq1.mrna1;geneID=comp156400_c2_seq1.path1;Name=comp156400_c2_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=2389;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016647
Chr2	stalkie_big_nohaplotig	exon	38931362	38931719	100	+	.	Parent=comp156400_c2_seq1.mrna1;Target=comp156400_c2_seq1 2032 2389 -
Chr2	stalkie_big_nohaplotig	exon	38931894	38932923	100	+	.	Parent=comp156400_c2_seq1.mrna1;Target=comp156400_c2_seq1 1002 2031 -
Chr2	stalkie_big_nohaplotig	exon	38964827	38964918	100	+	.	Parent=comp156400_c2_seq1.mrna1;Target=comp156400_c2_seq1 910 1001 -
Chr2	stalkie_big_nohaplotig	exon	38974011	38974078	100	+	.	Parent=comp156400_c2_seq1.mrna1;Target=comp156400_c2_seq1 842 909 -
Chr2	stalkie_big_nohaplotig	exon	38974199	38974334	100	+	.	Parent=comp156400_c2_seq1.mrna1;Target=comp156400_c2_seq1 706 841 -
Chr2	stalkie_big_nohaplotig	exon	38976902	38976973	100	+	.	Parent=comp156400_c2_seq1.mrna1;Target=comp156400_c2_seq1 634 705 -
Chr2	stalkie_big_nohaplotig	exon	38977070	38977214	100	+	.	Parent=comp156400_c2_seq1.mrna1;Target=comp156400_c2_seq1 489 633 -
Chr2	stalkie_big_nohaplotig	exon	38977553	38977608	100	+	.	Parent=comp156400_c2_seq1.mrna1;Target=comp156400_c2_seq1 433 488 -
Chr2	stalkie_big_nohaplotig	exon	38977684	38977932	100	+	.	Parent=comp156400_c2_seq1.mrna1;Target=comp156400_c2_seq1 184 432 -
Chr2	stalkie_big_nohaplotig	exon	38978777	38978959	100	+	.	Parent=comp156400_c2_seq1.mrna1;Target=comp156400_c2_seq1 1 183 -
Chr2	stalkie_big_nohaplotig	CDS	38931363	38931719	.	+	0	Parent=comp156400_c2_seq1.mrna1;Target=comp156400_c2_seq1 2032 2388 .
Chr2	stalkie_big_nohaplotig	CDS	38931894	38932923	.	+	0	Parent=comp156400_c2_seq1.mrna1;Target=comp156400_c2_seq1 1002 2031 .
Chr2	stalkie_big_nohaplotig	CDS	38964827	38964918	.	+	2	Parent=comp156400_c2_seq1.mrna1;Target=comp156400_c2_seq1 910 1001 .
Chr2	stalkie_big_nohaplotig	CDS	38974011	38974078	.	+	0	Parent=comp156400_c2_seq1.mrna1;Target=comp156400_c2_seq1 842 909 .
Chr2	stalkie_big_nohaplotig	CDS	38974199	38974334	.	+	1	Parent=comp156400_c2_seq1.mrna1;Target=comp156400_c2_seq1 706 841 .
Chr2	stalkie_big_nohaplotig	CDS	38976902	38976973	.	+	0	Parent=comp156400_c2_seq1.mrna1;Target=comp156400_c2_seq1 634 705 .
Chr2	stalkie_big_nohaplotig	CDS	38977070	38977214	.	+	0	Parent=comp156400_c2_seq1.mrna1;Target=comp156400_c2_seq1 489 633 .
Chr2	stalkie_big_nohaplotig	CDS	38977553	38977608	.	+	2	Parent=comp156400_c2_seq1.mrna1;Target=comp156400_c2_seq1 433 488 .
Chr2	stalkie_big_nohaplotig	CDS	38977684	38977932	.	+	0	Parent=comp156400_c2_seq1.mrna1;Target=comp156400_c2_seq1 184 432 .
Chr2	stalkie_big_nohaplotig	CDS	38978777	38978959	.	+	0	Parent=comp156400_c2_seq1.mrna1;Target=comp156400_c2_seq1 1 183 .
Chr2	gffcl	locus	38979494	38991474	.	+	.	ID=RLOC_00016648;geneIDs=FBgn0259234.1.path1,comp158796_c1_seq1.path1;transcripts=FBgn0259234.1.mrna1,comp158796_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38979494	38990929	.	+	.	ID=FBgn0259234.1.mrna1;geneID=FBgn0259234.1.path1;Name=FBgn0259234.1;Dir=sensecoverage=99.6;identity=99.8;matches=3805;mismatches=7;indels=0;unknowns=0;locus=RLOC_00016648
Chr2	stalkie_big_nohaplotig	exon	38979494	38980114	100	+	.	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 7 627 +
Chr2	stalkie_big_nohaplotig	exon	38982186	38983352	99	+	.	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 628 1794 +
Chr2	stalkie_big_nohaplotig	exon	38983420	38983689	100	+	.	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 1795 2064 +
Chr2	stalkie_big_nohaplotig	exon	38985449	38985570	100	+	.	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 2065 2186 +
Chr2	stalkie_big_nohaplotig	exon	38985633	38985738	100	+	.	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 2187 2292 +
Chr2	stalkie_big_nohaplotig	exon	38986247	38986389	100	+	.	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 2293 2435 +
Chr2	stalkie_big_nohaplotig	exon	38986465	38986584	100	+	.	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 2436 2555 +
Chr2	stalkie_big_nohaplotig	exon	38986648	38986757	100	+	.	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 2556 2665 +
Chr2	stalkie_big_nohaplotig	exon	38986868	38986987	100	+	.	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 2666 2785 +
Chr2	stalkie_big_nohaplotig	exon	38987611	38987678	100	+	.	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 2786 2853 +
Chr2	stalkie_big_nohaplotig	exon	38987763	38988138	100	+	.	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 2854 3229 +
Chr2	stalkie_big_nohaplotig	exon	38988452	38988851	100	+	.	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 3230 3629 +
Chr2	stalkie_big_nohaplotig	exon	38988915	38988989	100	+	.	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 3630 3704 +
Chr2	stalkie_big_nohaplotig	exon	38990816	38990929	100	+	.	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 3705 3818 +
Chr2	stalkie_big_nohaplotig	CDS	38979494	38980114	.	+	0	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 7 627 +
Chr2	stalkie_big_nohaplotig	CDS	38982186	38983352	.	+	0	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 628 1794 +
Chr2	stalkie_big_nohaplotig	CDS	38983420	38983689	.	+	0	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 1795 2064 +
Chr2	stalkie_big_nohaplotig	CDS	38985449	38985570	.	+	0	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 2065 2186 +
Chr2	stalkie_big_nohaplotig	CDS	38985633	38985738	.	+	1	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 2187 2292 +
Chr2	stalkie_big_nohaplotig	CDS	38986247	38986389	.	+	0	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 2293 2435 +
Chr2	stalkie_big_nohaplotig	CDS	38986465	38986584	.	+	1	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 2436 2555 +
Chr2	stalkie_big_nohaplotig	CDS	38986648	38986757	.	+	1	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 2556 2665 +
Chr2	stalkie_big_nohaplotig	CDS	38986868	38986987	.	+	2	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 2666 2785 +
Chr2	stalkie_big_nohaplotig	CDS	38987611	38987678	.	+	2	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 2786 2853 +
Chr2	stalkie_big_nohaplotig	CDS	38987763	38988138	.	+	0	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 2854 3229 +
Chr2	stalkie_big_nohaplotig	CDS	38988452	38988851	.	+	2	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 3230 3629 +
Chr2	stalkie_big_nohaplotig	CDS	38988915	38988989	.	+	1	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 3630 3704 +
Chr2	stalkie_big_nohaplotig	CDS	38990816	38990927	.	+	1	Parent=FBgn0259234.1.mrna1;Target=FBgn0259234.1 3705 3816 +
Chr2	stalkie_big_nohaplotig	mRNA	38979494	38991474	.	+	.	ID=comp158796_c1_seq1.mrna1;geneID=comp158796_c1_seq1.path1;Name=comp158796_c1_seq1;Dir=antisensecoverage=99.4;identity=99.8;matches=4087;mismatches=7;indels=0;unknowns=0;locus=RLOC_00016648
Chr2	stalkie_big_nohaplotig	exon	38979494	38980114	100	+	.	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 3492 4112 -
Chr2	stalkie_big_nohaplotig	exon	38982186	38983352	99	+	.	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 2325 3491 -
Chr2	stalkie_big_nohaplotig	exon	38983420	38983689	100	+	.	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 2055 2324 -
Chr2	stalkie_big_nohaplotig	exon	38985449	38985570	100	+	.	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 1933 2054 -
Chr2	stalkie_big_nohaplotig	exon	38985633	38985738	100	+	.	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 1827 1932 -
Chr2	stalkie_big_nohaplotig	exon	38986247	38986389	100	+	.	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 1684 1826 -
Chr2	stalkie_big_nohaplotig	exon	38986465	38986584	100	+	.	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 1564 1683 -
Chr2	stalkie_big_nohaplotig	exon	38986648	38986757	100	+	.	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 1454 1563 -
Chr2	stalkie_big_nohaplotig	exon	38986868	38986987	100	+	.	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 1334 1453 -
Chr2	stalkie_big_nohaplotig	exon	38987611	38987678	100	+	.	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 1266 1333 -
Chr2	stalkie_big_nohaplotig	exon	38987763	38988138	100	+	.	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 890 1265 -
Chr2	stalkie_big_nohaplotig	exon	38988452	38988851	100	+	.	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 490 889 -
Chr2	stalkie_big_nohaplotig	exon	38988915	38988989	100	+	.	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 415 489 -
Chr2	stalkie_big_nohaplotig	exon	38989621	38989648	100	+	.	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 387 414 -
Chr2	stalkie_big_nohaplotig	exon	38990816	38990929	100	+	.	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 273 386 -
Chr2	stalkie_big_nohaplotig	exon	38991221	38991474	100	+	.	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 19 272 -
Chr2	stalkie_big_nohaplotig	CDS	38979494	38980114	.	+	0	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 3492 4112 .
Chr2	stalkie_big_nohaplotig	CDS	38982186	38983352	.	+	0	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 2325 3491 .
Chr2	stalkie_big_nohaplotig	CDS	38983420	38983689	.	+	0	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 2055 2324 .
Chr2	stalkie_big_nohaplotig	CDS	38985449	38985570	.	+	0	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 1933 2054 .
Chr2	stalkie_big_nohaplotig	CDS	38985633	38985738	.	+	1	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 1827 1932 .
Chr2	stalkie_big_nohaplotig	CDS	38986247	38986389	.	+	0	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 1684 1826 .
Chr2	stalkie_big_nohaplotig	CDS	38986465	38986584	.	+	1	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 1564 1683 .
Chr2	stalkie_big_nohaplotig	CDS	38986648	38986757	.	+	1	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 1454 1563 .
Chr2	stalkie_big_nohaplotig	CDS	38986868	38986987	.	+	2	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 1334 1453 .
Chr2	stalkie_big_nohaplotig	CDS	38987611	38987678	.	+	2	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 1266 1333 .
Chr2	stalkie_big_nohaplotig	CDS	38987763	38988138	.	+	0	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 890 1265 .
Chr2	stalkie_big_nohaplotig	CDS	38988452	38988851	.	+	2	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 490 889 .
Chr2	stalkie_big_nohaplotig	CDS	38988915	38988989	.	+	1	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 415 489 .
Chr2	stalkie_big_nohaplotig	CDS	38989621	38989648	.	+	1	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 387 414 .
Chr2	stalkie_big_nohaplotig	CDS	38990816	38990929	.	+	0	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 273 386 .
Chr2	stalkie_big_nohaplotig	CDS	38991221	38991223	.	+	0	Parent=comp158796_c1_seq1.mrna1;Target=comp158796_c1_seq1 270 272 .
Chr2	gffcl	locus	38992768	38993217	.	+	.	ID=RLOC_00016649;geneIDs=comp151420_c0_seq1.path1;transcripts=comp151420_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38992768	38993217	.	+	.	ID=comp151420_c0_seq1.mrna1;geneID=comp151420_c0_seq1.path1;Name=comp151420_c0_seq1;Dir=indeterminatecoverage=94.2;identity=98.9;matches=447;mismatches=3;indels=2;unknowns=0;Target=comp151420_c0_seq1 480 29 .;CDS_Target=comp151420_c0_seq1 79 29 .;locus=RLOC_00016649
Chr2	stalkie_big_nohaplotig	exon	38992768	38993217	98	+	.	Parent=comp151420_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38992768	38992818	.	+	0	Parent=comp151420_c0_seq1.mrna1
Chr2	gffcl	locus	38993268	38993603	.	-	.	ID=RLOC_00016650;geneIDs=comp159259_c0_seq1.path1;transcripts=comp159259_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38993268	38993603	.	-	.	ID=comp159259_c0_seq1.mrna1;geneID=comp159259_c0_seq1.path1;Name=comp159259_c0_seq1;Dir=indeterminatecoverage=81.8;identity=99.7;matches=335;mismatches=1;indels=0;unknowns=0;Target=comp159259_c0_seq1 411 76 .;CDS_Target=comp159259_c0_seq1 325 128 .;locus=RLOC_00016650
Chr2	stalkie_big_nohaplotig	exon	38993268	38993603	99	-	.	Parent=comp159259_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38993354	38993551	.	-	0	Parent=comp159259_c0_seq1.mrna1
Chr2	gffcl	locus	38997194	38997775	.	+	.	ID=RLOC_00016651;geneIDs=comp141900_c0_seq1.path1;transcripts=comp141900_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	38997194	38997775	.	+	.	ID=comp141900_c0_seq1.mrna1;geneID=comp141900_c0_seq1.path1;Name=comp141900_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=581;mismatches=1;indels=0;unknowns=0;Target=comp141900_c0_seq1 582 1 .;CDS_Target=comp141900_c0_seq1 47 3 .;locus=RLOC_00016651
Chr2	stalkie_big_nohaplotig	exon	38997194	38997775	99	+	.	Parent=comp141900_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	38997196	38997240	.	+	0	Parent=comp141900_c0_seq1.mrna1
Chr2	gffcl	locus	39058148	39061539	.	+	.	ID=RLOC_00016652;geneIDs=FBgn0004360.1.path1;transcripts=FBgn0004360.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39058148	39061539	.	+	.	ID=FBgn0004360.1.mrna1;geneID=FBgn0004360.1.path1;Name=FBgn0004360.1;Dir=sensecoverage=90.6;identity=100.0;matches=1000;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016652
Chr2	stalkie_big_nohaplotig	exon	39058148	39058365	100	+	.	Parent=FBgn0004360.1.mrna1;Target=FBgn0004360.1 105 322 +
Chr2	stalkie_big_nohaplotig	exon	39058501	39058802	100	+	.	Parent=FBgn0004360.1.mrna1;Target=FBgn0004360.1 323 624 +
Chr2	stalkie_big_nohaplotig	exon	39058886	39059073	100	+	.	Parent=FBgn0004360.1.mrna1;Target=FBgn0004360.1 625 812 +
Chr2	stalkie_big_nohaplotig	exon	39061248	39061539	100	+	.	Parent=FBgn0004360.1.mrna1;Target=FBgn0004360.1 813 1104 +
Chr2	stalkie_big_nohaplotig	CDS	39058149	39058365	.	+	0	Parent=FBgn0004360.1.mrna1;Target=FBgn0004360.1 106 322 +
Chr2	stalkie_big_nohaplotig	CDS	39058501	39058802	.	+	2	Parent=FBgn0004360.1.mrna1;Target=FBgn0004360.1 323 624 +
Chr2	stalkie_big_nohaplotig	CDS	39058886	39059073	.	+	0	Parent=FBgn0004360.1.mrna1;Target=FBgn0004360.1 625 812 +
Chr2	stalkie_big_nohaplotig	CDS	39061248	39061539	.	+	1	Parent=FBgn0004360.1.mrna1;Target=FBgn0004360.1 813 1104 +
Chr2	gffcl	locus	39093452	39172183	.	+	.	ID=RLOC_00016653;geneIDs=FBgn0259246.1.path1;transcripts=FBgn0259246.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39093452	39172183	.	+	.	ID=FBgn0259246.1.mrna1;geneID=FBgn0259246.1.path1;Name=FBgn0259246.1;Dir=sensecoverage=99.9;identity=99.9;matches=4197;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016653
Chr2	stalkie_big_nohaplotig	exon	39093452	39093470	100	+	.	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 1 19 +
Chr2	stalkie_big_nohaplotig	exon	39093822	39093992	100	+	.	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 20 190 +
Chr2	stalkie_big_nohaplotig	exon	39094488	39094744	100	+	.	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 191 447 +
Chr2	stalkie_big_nohaplotig	exon	39094815	39095061	100	+	.	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 448 694 +
Chr2	stalkie_big_nohaplotig	exon	39099374	39099429	100	+	.	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 695 750 +
Chr2	stalkie_big_nohaplotig	exon	39149333	39149422	100	+	.	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 751 840 +
Chr2	stalkie_big_nohaplotig	exon	39149585	39149830	99	+	.	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 841 1086 +
Chr2	stalkie_big_nohaplotig	exon	39151692	39152180	100	+	.	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 1087 1575 +
Chr2	stalkie_big_nohaplotig	exon	39152533	39152565	100	+	.	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 1576 1608 +
Chr2	stalkie_big_nohaplotig	exon	39158332	39158448	100	+	.	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 1609 1725 +
Chr2	stalkie_big_nohaplotig	exon	39165964	39166146	100	+	.	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 1726 1908 +
Chr2	stalkie_big_nohaplotig	exon	39168060	39168380	100	+	.	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 1909 2229 +
Chr2	stalkie_big_nohaplotig	exon	39169881	39170069	100	+	.	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 2230 2418 +
Chr2	stalkie_big_nohaplotig	exon	39170335	39172038	99	+	.	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 2419 4122 +
Chr2	stalkie_big_nohaplotig	exon	39172106	39172183	100	+	.	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 4123 4200 +
Chr2	stalkie_big_nohaplotig	CDS	39093452	39093470	.	+	0	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 1 19 +
Chr2	stalkie_big_nohaplotig	CDS	39093822	39093992	.	+	2	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 20 190 +
Chr2	stalkie_big_nohaplotig	CDS	39094488	39094744	.	+	2	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 191 447 +
Chr2	stalkie_big_nohaplotig	CDS	39094815	39095061	.	+	0	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 448 694 +
Chr2	stalkie_big_nohaplotig	CDS	39099374	39099429	.	+	2	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 695 750 +
Chr2	stalkie_big_nohaplotig	CDS	39149333	39149422	.	+	0	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 751 840 +
Chr2	stalkie_big_nohaplotig	CDS	39149585	39149830	.	+	0	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 841 1086 +
Chr2	stalkie_big_nohaplotig	CDS	39151692	39152180	.	+	0	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 1087 1575 +
Chr2	stalkie_big_nohaplotig	CDS	39152533	39152565	.	+	0	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 1576 1608 +
Chr2	stalkie_big_nohaplotig	CDS	39158332	39158448	.	+	0	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 1609 1725 +
Chr2	stalkie_big_nohaplotig	CDS	39165964	39166146	.	+	0	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 1726 1908 +
Chr2	stalkie_big_nohaplotig	CDS	39168060	39168380	.	+	0	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 1909 2229 +
Chr2	stalkie_big_nohaplotig	CDS	39169881	39170069	.	+	0	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 2230 2418 +
Chr2	stalkie_big_nohaplotig	CDS	39170335	39172038	.	+	0	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 2419 4122 +
Chr2	stalkie_big_nohaplotig	CDS	39172106	39172183	.	+	0	Parent=FBgn0259246.1.mrna1;Target=FBgn0259246.1 4123 4200 +
Chr2	gffcl	locus	39122177	39122470	.	-	.	ID=RLOC_00016654;geneIDs=comp69907_c0_seq1.path1;transcripts=comp69907_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39122177	39122470	.	-	.	ID=comp69907_c0_seq1.mrna1;geneID=comp69907_c0_seq1.path1;Name=comp69907_c0_seq1;Dir=indeterminatecoverage=94.8;identity=100.0;matches=294;mismatches=0;indels=0;unknowns=0;Target=comp69907_c0_seq1 294 1 .;CDS_Target=comp69907_c0_seq1 272 150 .;locus=RLOC_00016654
Chr2	stalkie_big_nohaplotig	exon	39122177	39122470	100	-	.	Parent=comp69907_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39122199	39122321	.	-	0	Parent=comp69907_c0_seq1.mrna1
Chr2	gffcl	locus	39133029	39133880	.	-	.	ID=RLOC_00016655;geneIDs=ORF2479.path1;transcripts=ORF2479.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39133029	39133880	.	-	.	ID=ORF2479.mrna1;geneID=ORF2479.path1;Name=ORF2479;Dir=indeterminatecoverage=100.0;identity=99.4;matches=847;mismatches=5;indels=0;unknowns=0;Target=ORF2479 852 1 .;locus=RLOC_00016655
Chr2	stalkie_big_nohaplotig	exon	39133029	39133880	99	-	.	Parent=ORF2479.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39133029	39133880	.	-	0	Parent=ORF2479.mrna1
Chr2	gffcl	locus	39139332	39142460	.	.	.	ID=RLOC_00016656;geneIDs=comp137618_c0_seq1.path1,comp144811_c0_seq1.path1,comp895014_c0_seq1.path1;transcripts=comp137618_c0_seq1.mrna1,comp895014_c0_seq1.mrna1,comp144811_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39139332	39142460	.	-	.	ID=comp137618_c0_seq1.mrna1;geneID=comp137618_c0_seq1.path1;Name=comp137618_c0_seq1;Dir=indeterminatecoverage=60.1;identity=98.6;matches=628;mismatches=3;indels=6;unknowns=0;locus=RLOC_00016656
Chr2	stalkie_big_nohaplotig	exon	39139332	39139685	99	-	.	Parent=comp137618_c0_seq1.mrna1;Target=comp137618_c0_seq1 1076 723 .
Chr2	stalkie_big_nohaplotig	exon	39140049	39140310	97	-	.	Parent=comp137618_c0_seq1.mrna1;Target=comp137618_c0_seq1 722 459 .
Chr2	stalkie_big_nohaplotig	exon	39140954	39140963	100	-	.	Parent=comp137618_c0_seq1.mrna1;Target=comp137618_c0_seq1 445 436 .
Chr2	stalkie_big_nohaplotig	exon	39142455	39142460	100	-	.	Parent=comp137618_c0_seq1.mrna1;Target=comp137618_c0_seq1 435 430 .
Chr2	stalkie_big_nohaplotig	CDS	39140269	39140310	.	-	0	Parent=comp137618_c0_seq1.mrna1;Target=comp137618_c0_seq1 502 459 .
Chr2	stalkie_big_nohaplotig	CDS	39140954	39140963	.	-	1	Parent=comp137618_c0_seq1.mrna1;Target=comp137618_c0_seq1 445 436 .
Chr2	stalkie_big_nohaplotig	CDS	39142455	39142459	.	-	0	Parent=comp137618_c0_seq1.mrna1;Target=comp137618_c0_seq1 435 431 .
Chr2	stalkie_big_nohaplotig	mRNA	39139669	39140054	.	+	.	ID=comp895014_c0_seq1.mrna1;geneID=comp895014_c0_seq1.path1;Name=comp895014_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=384;mismatches=0;indels=2;unknowns=0;Target=comp895014_c0_seq1 384 1 .;CDS_Target=comp895014_c0_seq1 104 3 .;locus=RLOC_00016656
Chr2	stalkie_big_nohaplotig	exon	39139669	39140054	99	+	.	Parent=comp895014_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39139671	39139774	.	+	0	Parent=comp895014_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39140308	39141364	.	+	.	ID=comp144811_c0_seq1.mrna1;geneID=comp144811_c0_seq1.path1;Name=comp144811_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1052;mismatches=5;indels=0;unknowns=0;Target=comp144811_c0_seq1 1057 1 .;CDS_Target=comp144811_c0_seq1 566 423 .;locus=RLOC_00016656
Chr2	stalkie_big_nohaplotig	exon	39140308	39141364	99	+	.	Parent=comp144811_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39140730	39140873	.	+	0	Parent=comp144811_c0_seq1.mrna1
Chr2	gffcl	locus	39146635	39147748	.	-	.	ID=RLOC_00016657;geneIDs=comp160310_c0_seq1.path1;transcripts=comp160310_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39146635	39147748	.	-	.	ID=comp160310_c0_seq1.mrna1;geneID=comp160310_c0_seq1.path1;Name=comp160310_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=1077;mismatches=37;indels=0;unknowns=0;Target=comp160310_c0_seq1 1114 1 .;CDS_Target=comp160310_c0_seq1 600 457 .;locus=RLOC_00016657
Chr2	stalkie_big_nohaplotig	exon	39146635	39147748	96	-	.	Parent=comp160310_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39147149	39147292	.	-	0	Parent=comp160310_c0_seq1.mrna1
Chr2	gffcl	locus	39176436	39177087	.	.	.	ID=RLOC_00016658;geneIDs=comp116568_c0_seq1.path1,comp145164_c1_seq1.path1;transcripts=comp116568_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39176691	39177087	.	+	.	ID=comp116568_c0_seq1.mrna1;geneID=comp116568_c0_seq1.path1;Name=comp116568_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=394;mismatches=1;indels=2;unknowns=0;Target=comp116568_c0_seq1 395 1 .;CDS_Target=comp116568_c0_seq1 55 2 .;locus=RLOC_00016658
Chr2	stalkie_big_nohaplotig	exon	39176691	39177087	99	+	.	Parent=comp116568_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39176692	39176747	.	+	0	Parent=comp116568_c0_seq1.mrna1
Chr2	gffcl	locus	39179899	39180444	.	-	.	ID=RLOC_00016659;geneIDs=comp116184_c0_seq1.path1;transcripts=comp116184_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39179899	39180444	.	-	.	ID=comp116184_c0_seq1.mrna1;geneID=comp116184_c0_seq1.path1;Name=comp116184_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=545;mismatches=1;indels=0;unknowns=0;Target=comp116184_c0_seq1 546 1 .;CDS_Target=comp116184_c0_seq1 468 358 .;locus=RLOC_00016659
Chr2	stalkie_big_nohaplotig	exon	39179899	39180444	99	-	.	Parent=comp116184_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39179977	39180087	.	-	0	Parent=comp116184_c0_seq1.mrna1
Chr2	gffcl	locus	39180566	39182863	.	-	.	ID=RLOC_00016660;geneIDs=comp158862_c0_seq1.path1;transcripts=comp158862_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39180566	39182863	.	-	.	ID=comp158862_c0_seq1.mrna1;geneID=comp158862_c0_seq1.path1;Name=comp158862_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=2286;mismatches=12;indels=0;unknowns=0;Target=comp158862_c0_seq1 2299 2 .;CDS_Target=comp158862_c0_seq1 1312 1274 .;locus=RLOC_00016660
Chr2	stalkie_big_nohaplotig	exon	39180566	39182863	99	-	.	Parent=comp158862_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39181553	39181591	.	-	0	Parent=comp158862_c0_seq1.mrna1
Chr2	gffcl	locus	39183372	39184454	.	.	.	ID=RLOC_00016661;geneIDs=comp134756_c0_seq1.path1,comp150245_c0_seq1.path1;transcripts=comp150245_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39183372	39184096	.	-	.	ID=comp150245_c0_seq1.mrna1;geneID=comp150245_c0_seq1.path1;Name=comp150245_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=725;mismatches=0;indels=0;unknowns=0;Target=comp150245_c0_seq1 725 1 .;CDS_Target=comp150245_c0_seq1 94 2 .;locus=RLOC_00016661
Chr2	stalkie_big_nohaplotig	exon	39183372	39184096	100	-	.	Parent=comp150245_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39184003	39184095	.	-	0	Parent=comp150245_c0_seq1.mrna1
Chr2	gffcl	locus	39184862	39185060	.	+	.	ID=RLOC_00016662;geneIDs=comp141642_c0_seq1.path1;transcripts=comp141642_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39184862	39185060	.	+	.	ID=comp141642_c0_seq1.mrna1;geneID=comp141642_c0_seq1.path1;Name=comp141642_c0_seq1;Dir=indeterminatecoverage=99.0;identity=100.0;matches=199;mismatches=0;indels=0;unknowns=0;Target=comp141642_c0_seq1 201 3 .;CDS_Target=comp141642_c0_seq1 106 5 .;locus=RLOC_00016662
Chr2	stalkie_big_nohaplotig	exon	39184862	39185060	100	+	.	Parent=comp141642_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39184864	39184965	.	+	0	Parent=comp141642_c0_seq1.mrna1
Chr2	gffcl	locus	39188354	39199153	.	+	.	ID=RLOC_00016663;geneIDs=FBgn0034763.1.path1;transcripts=FBgn0034763.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39188354	39199153	.	+	.	ID=FBgn0034763.1.mrna1;geneID=FBgn0034763.1.path1;Name=FBgn0034763.1;Dir=sensecoverage=100.0;identity=100.0;matches=468;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016663
Chr2	stalkie_big_nohaplotig	exon	39188354	39188507	100	+	.	Parent=FBgn0034763.1.mrna1;Target=FBgn0034763.1 1 154 +
Chr2	stalkie_big_nohaplotig	exon	39198840	39199153	100	+	.	Parent=FBgn0034763.1.mrna1;Target=FBgn0034763.1 155 468 +
Chr2	stalkie_big_nohaplotig	CDS	39188354	39188507	.	+	0	Parent=FBgn0034763.1.mrna1;Target=FBgn0034763.1 1 154 +
Chr2	stalkie_big_nohaplotig	CDS	39198840	39199153	.	+	2	Parent=FBgn0034763.1.mrna1;Target=FBgn0034763.1 155 468 +
Chr2	gffcl	locus	39192034	39192882	.	+	.	ID=RLOC_00016664;geneIDs=ORF2509.path1;transcripts=ORF2509.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39192034	39192882	.	+	.	ID=ORF2509.mrna1;geneID=ORF2509.path1;Name=ORF2509;Dir=indeterminatecoverage=100.0;identity=100.0;matches=849;mismatches=0;indels=0;unknowns=0;Target=ORF2509 849 1 .;locus=RLOC_00016664
Chr2	stalkie_big_nohaplotig	exon	39192034	39192882	100	+	.	Parent=ORF2509.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39192034	39192882	.	+	0	Parent=ORF2509.mrna1
Chr2	gffcl	locus	39201311	39202070	.	+	.	ID=RLOC_00016665;geneIDs=comp145465_c0_seq1.path1;transcripts=comp145465_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39201311	39202070	.	+	.	ID=comp145465_c0_seq1.mrna1;geneID=comp145465_c0_seq1.path1;Name=comp145465_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=760;mismatches=0;indels=0;unknowns=0;Target=comp145465_c0_seq1 760 1 .;CDS_Target=comp145465_c0_seq1 510 406 .;locus=RLOC_00016665
Chr2	stalkie_big_nohaplotig	exon	39201311	39202070	100	+	.	Parent=comp145465_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39201716	39201820	.	+	0	Parent=comp145465_c0_seq1.mrna1
Chr2	gffcl	locus	39205469	39205816	.	-	.	ID=RLOC_00016666;geneIDs=comp135907_c0_seq1.path1;transcripts=comp135907_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39205469	39205816	.	-	.	ID=comp135907_c0_seq1.mrna1;geneID=comp135907_c0_seq1.path1;Name=comp135907_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.3;matches=348;mismatches=0;indels=17;unknowns=0;Target=comp135907_c0_seq1 365 1 .;CDS_Target=comp135907_c0_seq1 188 156 .;locus=RLOC_00016666
Chr2	stalkie_big_nohaplotig	exon	39205469	39205816	95	-	.	Parent=comp135907_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39205646	39205678	.	-	0	Parent=comp135907_c0_seq1.mrna1
Chr2	gffcl	locus	39205847	39206222	.	-	.	ID=RLOC_00016667;geneIDs=comp118499_c0_seq1.path1;transcripts=comp118499_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39205847	39206222	.	-	.	ID=comp118499_c0_seq1.mrna1;geneID=comp118499_c0_seq1.path1;Name=comp118499_c0_seq1;Dir=indeterminatecoverage=95.2;identity=100.0;matches=376;mismatches=0;indels=0;unknowns=0;Target=comp118499_c0_seq1 376 1 .;CDS_Target=comp118499_c0_seq1 59 3 .;locus=RLOC_00016667
Chr2	stalkie_big_nohaplotig	exon	39205847	39206222	100	-	.	Parent=comp118499_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39206164	39206220	.	-	0	Parent=comp118499_c0_seq1.mrna1
Chr2	gffcl	locus	39254480	39256140	.	-	.	ID=RLOC_00016668;geneIDs=FBgn0030411.1.path1,comp134796_c0_seq1.path1;transcripts=FBgn0030411.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39254480	39255507	.	-	.	ID=FBgn0030411.1.mrna1;geneID=FBgn0030411.1.path1;Name=FBgn0030411.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1024;mismatches=4;indels=1;unknowns=0;Target=FBgn0030411.1 1029 1 .;CDS_Target=FBgn0030411.1 20 3 .;locus=RLOC_00016668
Chr2	stalkie_big_nohaplotig	exon	39254480	39255507	99	-	.	Parent=FBgn0030411.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39255489	39255505	.	-	0	Parent=FBgn0030411.1.mrna1
Chr2	gffcl	locus	39316484	39383823	.	+	.	ID=RLOC_00016670;geneIDs=comp155704_c1_seq1.path1;transcripts=comp155704_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39316484	39383823	.	+	.	ID=comp155704_c1_seq1.mrna1;geneID=comp155704_c1_seq1.path1;Name=comp155704_c1_seq1;Dir=antisensecoverage=86.7;identity=93.6;matches=1306;mismatches=27;indels=63;unknowns=0;Target=comp155704_c1_seq1 1366 1542 .;locus=RLOC_00016670
Chr2	stalkie_big_nohaplotig	exon	39316484	39317580	99	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 660 1758 -
Chr2	stalkie_big_nohaplotig	exon	39323275	39323276	100	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 658 659 -
Chr2	stalkie_big_nohaplotig	exon	39330910	39330917	100	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 650 657 -
Chr2	stalkie_big_nohaplotig	exon	39330944	39331000	29	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 575 591 -
Chr2	stalkie_big_nohaplotig	exon	39337995	39337998	100	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 571 574 -
Chr2	stalkie_big_nohaplotig	exon	39341167	39341170	100	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 567 570 -
Chr2	stalkie_big_nohaplotig	exon	39341173	39341180	100	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 534 541 -
Chr2	stalkie_big_nohaplotig	exon	39341875	39341893	42	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 499 533 -
Chr2	stalkie_big_nohaplotig	exon	39342628	39342661	45	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 463 498 -
Chr2	stalkie_big_nohaplotig	exon	39343027	39343039	100	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 449 461 -
Chr2	stalkie_big_nohaplotig	exon	39345758	39345768	90	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 412 421 -
Chr2	stalkie_big_nohaplotig	exon	39347093	39347094	100	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 410 411 -
Chr2	stalkie_big_nohaplotig	exon	39351362	39351364	100	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 407 409 -
Chr2	stalkie_big_nohaplotig	exon	39351750	39351752	100	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 404 406 -
Chr2	stalkie_big_nohaplotig	exon	39352212	39352215	100	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 400 403 -
Chr2	stalkie_big_nohaplotig	exon	39360113	39360121	100	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 391 399 -
Chr2	stalkie_big_nohaplotig	exon	39361386	39361391	100	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 385 390 -
Chr2	stalkie_big_nohaplotig	exon	39362836	39362844	100	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 376 384 -
Chr2	stalkie_big_nohaplotig	exon	39364534	39364535	100	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 374 375 -
Chr2	stalkie_big_nohaplotig	exon	39365569	39365579	100	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 363 373 -
Chr2	stalkie_big_nohaplotig	exon	39366854	39366865	66	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 351 362 -
Chr2	stalkie_big_nohaplotig	exon	39372708	39372716	100	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 342 350 -
Chr2	stalkie_big_nohaplotig	exon	39374492	39374495	100	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 338 341 -
Chr2	stalkie_big_nohaplotig	exon	39374965	39374966	100	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 336 337 -
Chr2	stalkie_big_nohaplotig	exon	39376764	39376770	100	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 329 335 -
Chr2	stalkie_big_nohaplotig	exon	39378164	39378170	100	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 322 328 -
Chr2	stalkie_big_nohaplotig	exon	39382549	39382559	81	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 311 321 -
Chr2	stalkie_big_nohaplotig	exon	39382947	39382949	100	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 246 248 -
Chr2	stalkie_big_nohaplotig	exon	39383812	39383823	100	+	.	Parent=comp155704_c1_seq1.mrna1;Target=comp155704_c1_seq1 234 245 -
Chr2	stalkie_big_nohaplotig	CDS	39316699	39316875	.	+	0	Parent=comp155704_c1_seq1.mrna1
Chr2	gffcl	locus	39317840	39318460	.	+	.	ID=RLOC_00016671;geneIDs=comp56219_c0_seq1.path1;transcripts=comp56219_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39317840	39318460	.	+	.	ID=comp56219_c0_seq1.mrna1;geneID=comp56219_c0_seq1.path1;Name=comp56219_c0_seq1;Dir=indeterminatecoverage=98.6;identity=100.0;matches=621;mismatches=0;indels=0;unknowns=0;Target=comp56219_c0_seq1 630 10 .;CDS_Target=comp56219_c0_seq1 628 563 .;locus=RLOC_00016671
Chr2	stalkie_big_nohaplotig	exon	39317840	39318460	100	+	.	Parent=comp56219_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39318393	39318458	.	+	0	Parent=comp56219_c0_seq1.mrna1
Chr2	gffcl	locus	39344923	39351007	.	-	.	ID=RLOC_00016672;geneIDs=FBgn0035557.1.path1;transcripts=FBgn0035557.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39344923	39351007	.	-	.	ID=FBgn0035557.1.mrna1;geneID=FBgn0035557.1.path1;Name=FBgn0035557.1;Dir=sensecoverage=100.0;identity=99.8;matches=2380;mismatches=5;indels=0;unknowns=3;locus=RLOC_00016672
Chr2	stalkie_big_nohaplotig	exon	39344923	39345051	99	-	.	Parent=FBgn0035557.1.mrna1;Target=FBgn0035557.1 2260 2388 +
Chr2	stalkie_big_nohaplotig	exon	39346487	39347045	99	-	.	Parent=FBgn0035557.1.mrna1;Target=FBgn0035557.1 1701 2259 +
Chr2	stalkie_big_nohaplotig	exon	39347113	39347358	100	-	.	Parent=FBgn0035557.1.mrna1;Target=FBgn0035557.1 1455 1700 +
Chr2	stalkie_big_nohaplotig	exon	39347427	39347546	100	-	.	Parent=FBgn0035557.1.mrna1;Target=FBgn0035557.1 1335 1454 +
Chr2	stalkie_big_nohaplotig	exon	39349607	39350483	100	-	.	Parent=FBgn0035557.1.mrna1;Target=FBgn0035557.1 458 1334 +
Chr2	stalkie_big_nohaplotig	exon	39350551	39351007	99	-	.	Parent=FBgn0035557.1.mrna1;Target=FBgn0035557.1 1 457 +
Chr2	stalkie_big_nohaplotig	CDS	39344923	39345051	.	-	0	Parent=FBgn0035557.1.mrna1;Target=FBgn0035557.1 2260 2388 +
Chr2	stalkie_big_nohaplotig	CDS	39346487	39347045	.	-	1	Parent=FBgn0035557.1.mrna1;Target=FBgn0035557.1 1701 2259 +
Chr2	stalkie_big_nohaplotig	CDS	39347113	39347358	.	-	1	Parent=FBgn0035557.1.mrna1;Target=FBgn0035557.1 1455 1700 +
Chr2	stalkie_big_nohaplotig	CDS	39347427	39347546	.	-	1	Parent=FBgn0035557.1.mrna1;Target=FBgn0035557.1 1335 1454 +
Chr2	stalkie_big_nohaplotig	CDS	39349607	39350483	.	-	2	Parent=FBgn0035557.1.mrna1;Target=FBgn0035557.1 458 1334 +
Chr2	stalkie_big_nohaplotig	CDS	39350551	39351007	.	-	0	Parent=FBgn0035557.1.mrna1;Target=FBgn0035557.1 1 457 +
Chr2	gffcl	locus	39389734	39389821	.	+	.	ID=RLOC_00016673;geneIDs=FBgn0019968.1.path1;transcripts=FBgn0019968.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39389734	39389821	.	+	.	ID=FBgn0019968.1.mrna1;geneID=FBgn0019968.1.path1;Name=FBgn0019968.1;Dir=indeterminatecoverage=1.5;identity=100.0;matches=88;mismatches=0;indels=0;unknowns=0;Target=FBgn0019968.1 88 1 .;locus=RLOC_00016673
Chr2	stalkie_big_nohaplotig	exon	39389734	39389821	100	+	.	Parent=FBgn0019968.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39389734	39389821	.	+	0	Parent=FBgn0019968.1.mrna1
Chr2	gffcl	locus	39440775	39451733	.	+	.	ID=RLOC_00016674;geneIDs=FBgn0015561.1.path1;transcripts=FBgn0015561.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39440775	39451733	.	+	.	ID=FBgn0015561.1.mrna1;geneID=FBgn0015561.1.path1;Name=FBgn0015561.1;Dir=sensecoverage=100.0;identity=99.1;matches=1499;mismatches=13;indels=0;unknowns=0;locus=RLOC_00016674
Chr2	stalkie_big_nohaplotig	exon	39440775	39441639	99	+	.	Parent=FBgn0015561.1.mrna1;Target=FBgn0015561.1 1 865 +
Chr2	stalkie_big_nohaplotig	exon	39451019	39451266	98	+	.	Parent=FBgn0015561.1.mrna1;Target=FBgn0015561.1 866 1113 +
Chr2	stalkie_big_nohaplotig	exon	39451335	39451733	99	+	.	Parent=FBgn0015561.1.mrna1;Target=FBgn0015561.1 1114 1512 +
Chr2	stalkie_big_nohaplotig	CDS	39440775	39441639	.	+	0	Parent=FBgn0015561.1.mrna1;Target=FBgn0015561.1 1 865 +
Chr2	stalkie_big_nohaplotig	CDS	39451019	39451266	.	+	2	Parent=FBgn0015561.1.mrna1;Target=FBgn0015561.1 866 1113 +
Chr2	stalkie_big_nohaplotig	CDS	39451335	39451733	.	+	0	Parent=FBgn0015561.1.mrna1;Target=FBgn0015561.1 1114 1512 +
Chr2	gffcl	locus	39470312	39476319	.	+	.	ID=RLOC_00016675;geneIDs=FBgn0034025.1.path1;transcripts=FBgn0034025.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39470312	39476319	.	+	.	ID=FBgn0034025.1.mrna1;geneID=FBgn0034025.1.path1;Name=FBgn0034025.1;Dir=sensecoverage=100.0;identity=99.8;matches=1893;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016675
Chr2	stalkie_big_nohaplotig	exon	39470312	39471063	100	+	.	Parent=FBgn0034025.1.mrna1;Target=FBgn0034025.1 1 752 +
Chr2	stalkie_big_nohaplotig	exon	39471862	39472261	99	+	.	Parent=FBgn0034025.1.mrna1;Target=FBgn0034025.1 753 1152 +
Chr2	stalkie_big_nohaplotig	exon	39474030	39474151	100	+	.	Parent=FBgn0034025.1.mrna1;Target=FBgn0034025.1 1153 1274 +
Chr2	stalkie_big_nohaplotig	exon	39475633	39475875	100	+	.	Parent=FBgn0034025.1.mrna1;Target=FBgn0034025.1 1275 1517 +
Chr2	stalkie_big_nohaplotig	exon	39475941	39476319	99	+	.	Parent=FBgn0034025.1.mrna1;Target=FBgn0034025.1 1518 1896 +
Chr2	stalkie_big_nohaplotig	CDS	39470312	39471063	.	+	0	Parent=FBgn0034025.1.mrna1;Target=FBgn0034025.1 1 752 +
Chr2	stalkie_big_nohaplotig	CDS	39471862	39472261	.	+	1	Parent=FBgn0034025.1.mrna1;Target=FBgn0034025.1 753 1152 +
Chr2	stalkie_big_nohaplotig	CDS	39474030	39474151	.	+	0	Parent=FBgn0034025.1.mrna1;Target=FBgn0034025.1 1153 1274 +
Chr2	stalkie_big_nohaplotig	CDS	39475633	39475875	.	+	1	Parent=FBgn0034025.1.mrna1;Target=FBgn0034025.1 1275 1517 +
Chr2	stalkie_big_nohaplotig	CDS	39475941	39476319	.	+	1	Parent=FBgn0034025.1.mrna1;Target=FBgn0034025.1 1518 1896 +
Chr2	gffcl	locus	39477305	39477792	.	+	.	ID=RLOC_00016676;geneIDs=comp113486_c0_seq1.path1;transcripts=comp113486_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39477305	39477792	.	+	.	ID=comp113486_c0_seq1.mrna1;geneID=comp113486_c0_seq1.path1;Name=comp113486_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=487;mismatches=1;indels=0;unknowns=0;Target=comp113486_c0_seq1 488 1 .;CDS_Target=comp113486_c0_seq1 311 174 .;locus=RLOC_00016676
Chr2	stalkie_big_nohaplotig	exon	39477305	39477792	99	+	.	Parent=comp113486_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39477478	39477615	.	+	0	Parent=comp113486_c0_seq1.mrna1
Chr2	gffcl	locus	39479059	39479683	.	+	.	ID=RLOC_00016677;geneIDs=comp159199_c0_seq1.path1;transcripts=comp159199_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39479059	39479683	.	+	.	ID=comp159199_c0_seq1.mrna1;geneID=comp159199_c0_seq1.path1;Name=comp159199_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.5;matches=622;mismatches=3;indels=0;unknowns=0;Target=comp159199_c0_seq1 625 1 .;CDS_Target=comp159199_c0_seq1 164 93 .;locus=RLOC_00016677
Chr2	stalkie_big_nohaplotig	exon	39479059	39479683	99	+	.	Parent=comp159199_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39479151	39479222	.	+	0	Parent=comp159199_c0_seq1.mrna1
Chr2	gffcl	locus	39482592	39888087	.	+	.	ID=RLOC_00016678;geneIDs=comp151551_c0_seq1.path1;transcripts=comp151551_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39482592	39888087	.	+	.	ID=comp151551_c0_seq1.mrna1;geneID=comp151551_c0_seq1.path1;Name=comp151551_c0_seq1;Dir=antisensecoverage=61.7;identity=99.5;matches=596;mismatches=3;indels=0;unknowns=0;Target=comp151551_c0_seq1 723 800 .;locus=RLOC_00016678
Chr2	stalkie_big_nohaplotig	exon	39482592	39482750	98	+	.	Parent=comp151551_c0_seq1.mrna1;Target=comp151551_c0_seq1 813 971 -
Chr2	stalkie_big_nohaplotig	exon	39526232	39526652	100	+	.	Parent=comp151551_c0_seq1.mrna1;Target=comp151551_c0_seq1 392 812 -
Chr2	stalkie_big_nohaplotig	exon	39887911	39887919	100	+	.	Parent=comp151551_c0_seq1.mrna1;Target=comp151551_c0_seq1 383 391 -
Chr2	stalkie_big_nohaplotig	exon	39888078	39888087	100	+	.	Parent=comp151551_c0_seq1.mrna1;Target=comp151551_c0_seq1 373 382 -
Chr2	stalkie_big_nohaplotig	CDS	39526244	39526321	.	+	0	Parent=comp151551_c0_seq1.mrna1
Chr2	gffcl	locus	39486099	39489046	.	+	.	ID=RLOC_00016679;geneIDs=comp163435_c1_seq1.path1;transcripts=comp163435_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39486099	39489046	.	+	.	ID=comp163435_c1_seq1.mrna1;geneID=comp163435_c1_seq1.path1;Name=comp163435_c1_seq1;Dir=indeterminatecoverage=99.0;identity=99.0;matches=2927;mismatches=15;indels=16;unknowns=0;Target=comp163435_c1_seq1 648 241 .;locus=RLOC_00016679
Chr2	stalkie_big_nohaplotig	exon	39486099	39488181	98	+	.	Parent=comp163435_c1_seq1.mrna1;Target=comp163435_c1_seq1 2096 3 .
Chr2	stalkie_big_nohaplotig	exon	39488186	39489046	99	+	.	Parent=comp163435_c1_seq1.mrna1;Target=comp163435_c1_seq1 3019 2158 .
Chr2	stalkie_big_nohaplotig	CDS	39486337	39486744	.	+	0	Parent=comp163435_c1_seq1.mrna1
Chr2	gffcl	locus	39498849	39499838	.	+	.	ID=RLOC_00016680;geneIDs=comp154010_c0_seq1.path1;transcripts=comp154010_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39498849	39499838	.	+	.	ID=comp154010_c0_seq1.mrna1;geneID=comp154010_c0_seq1.path1;Name=comp154010_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=988;mismatches=2;indels=0;unknowns=0;Target=comp154010_c0_seq1 990 1 .;CDS_Target=comp154010_c0_seq1 670 488 .;locus=RLOC_00016680
Chr2	stalkie_big_nohaplotig	exon	39498849	39499838	99	+	.	Parent=comp154010_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39499336	39499518	.	+	0	Parent=comp154010_c0_seq1.mrna1
Chr2	gffcl	locus	39500801	39500956	.	+	.	ID=RLOC_00016681;geneIDs=comp152209_c0_seq1.path2;transcripts=comp152209_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	39500801	39500956	.	+	.	ID=comp152209_c0_seq1.mrna2;geneID=comp152209_c0_seq1.path2;Name=comp152209_c0_seq1;Dir=indeterminatecoverage=11.4;identity=100.0;matches=156;mismatches=0;indels=0;unknowns=0;Target=comp152209_c0_seq1 1369 1214 .;locus=RLOC_00016681
Chr2	stalkie_big_nohaplotig	exon	39500801	39500956	100	+	.	Parent=comp152209_c0_seq1.mrna2
Chr2	gffcl	locus	39501605	39501890	.	-	.	ID=RLOC_00016682;geneIDs=comp117343_c0_seq1.path1;transcripts=comp117343_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39501605	39501890	.	-	.	ID=comp117343_c0_seq1.mrna1;geneID=comp117343_c0_seq1.path1;Name=comp117343_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=286;mismatches=0;indels=0;unknowns=0;Target=comp117343_c0_seq1 286 1 .;CDS_Target=comp117343_c0_seq1 109 2 .;locus=RLOC_00016682
Chr2	stalkie_big_nohaplotig	exon	39501605	39501890	100	-	.	Parent=comp117343_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39501782	39501889	.	-	0	Parent=comp117343_c0_seq1.mrna1
Chr2	gffcl	locus	39502485	39503107	.	+	.	ID=RLOC_00016683;geneIDs=comp147642_c0_seq1.path1;transcripts=comp147642_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39502485	39503107	.	+	.	ID=comp147642_c0_seq1.mrna1;geneID=comp147642_c0_seq1.path1;Name=comp147642_c0_seq1;Dir=indeterminatecoverage=98.3;identity=97.6;matches=617;mismatches=6;indels=9;unknowns=0;Target=comp147642_c0_seq1 632 1 .;CDS_Target=comp147642_c0_seq1 262 137 .;locus=RLOC_00016683
Chr2	stalkie_big_nohaplotig	exon	39502485	39503107	97	+	.	Parent=comp147642_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39502621	39502746	.	+	0	Parent=comp147642_c0_seq1.mrna1
Chr2	gffcl	locus	39505542	39522748	.	-	.	ID=RLOC_00016684;geneIDs=FBgn0019968.1.path2,comp163534_c1_seq1.path1;transcripts=comp163534_c1_seq1.mrna1,FBgn0019968.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	39505542	39522729	.	-	.	ID=comp163534_c1_seq1.mrna1;geneID=comp163534_c1_seq1.path1;Name=comp163534_c1_seq1;Dir=antisensecoverage=94.3;identity=99.7;matches=6897;mismatches=18;indels=0;unknowns=0;locus=RLOC_00016684
Chr2	stalkie_big_nohaplotig	exon	39505542	39506447	100	-	.	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 7 912 -
Chr2	stalkie_big_nohaplotig	exon	39506522	39506821	99	-	.	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 913 1212 -
Chr2	stalkie_big_nohaplotig	exon	39508058	39508768	99	-	.	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 1213 1923 -
Chr2	stalkie_big_nohaplotig	exon	39509528	39509600	100	-	.	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 1924 1996 -
Chr2	stalkie_big_nohaplotig	exon	39509660	39510003	100	-	.	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 1997 2340 -
Chr2	stalkie_big_nohaplotig	exon	39515175	39515270	100	-	.	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 2341 2436 -
Chr2	stalkie_big_nohaplotig	exon	39515334	39515454	100	-	.	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 2437 2557 -
Chr2	stalkie_big_nohaplotig	exon	39516921	39516950	100	-	.	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 2558 2587 -
Chr2	stalkie_big_nohaplotig	exon	39517312	39517457	100	-	.	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 2588 2733 -
Chr2	stalkie_big_nohaplotig	exon	39517530	39519637	99	-	.	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 2734 4841 -
Chr2	stalkie_big_nohaplotig	exon	39519703	39519870	99	-	.	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 4842 5009 -
Chr2	stalkie_big_nohaplotig	exon	39519928	39520074	100	-	.	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 5010 5156 -
Chr2	stalkie_big_nohaplotig	exon	39520140	39520562	100	-	.	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 5157 5579 -
Chr2	stalkie_big_nohaplotig	exon	39520635	39521226	100	-	.	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 5580 6171 -
Chr2	stalkie_big_nohaplotig	exon	39521305	39521552	100	-	.	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 6172 6419 -
Chr2	stalkie_big_nohaplotig	exon	39521821	39522089	100	-	.	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 6420 6688 -
Chr2	stalkie_big_nohaplotig	exon	39522266	39522429	100	-	.	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 6689 6852 -
Chr2	stalkie_big_nohaplotig	exon	39522661	39522729	100	-	.	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 6853 6921 -
Chr2	stalkie_big_nohaplotig	CDS	39506371	39506447	.	-	2	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 836 912 .
Chr2	stalkie_big_nohaplotig	CDS	39506522	39506821	.	-	2	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 913 1212 .
Chr2	stalkie_big_nohaplotig	CDS	39508058	39508768	.	-	2	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 1213 1923 .
Chr2	stalkie_big_nohaplotig	CDS	39509528	39509600	.	-	0	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 1924 1996 .
Chr2	stalkie_big_nohaplotig	CDS	39509660	39510003	.	-	2	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 1997 2340 .
Chr2	stalkie_big_nohaplotig	CDS	39515175	39515270	.	-	2	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 2341 2436 .
Chr2	stalkie_big_nohaplotig	CDS	39515334	39515454	.	-	0	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 2437 2557 .
Chr2	stalkie_big_nohaplotig	CDS	39516921	39516950	.	-	0	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 2558 2587 .
Chr2	stalkie_big_nohaplotig	CDS	39517312	39517457	.	-	2	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 2588 2733 .
Chr2	stalkie_big_nohaplotig	CDS	39517530	39519000	.	-	0	Parent=comp163534_c1_seq1.mrna1;Target=comp163534_c1_seq1 2734 4204 .
Chr2	stalkie_big_nohaplotig	mRNA	39506374	39522748	.	-	.	ID=FBgn0019968.1.mrna2;geneID=FBgn0019968.1.path2;Name=FBgn0019968.1;Dir=sensecoverage=98.5;identity=99.8;matches=5763;mismatches=11;indels=0;unknowns=0;locus=RLOC_00016684
Chr2	stalkie_big_nohaplotig	exon	39506374	39506447	100	-	.	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 5789 5862 +
Chr2	stalkie_big_nohaplotig	exon	39506522	39506821	99	-	.	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 5489 5788 +
Chr2	stalkie_big_nohaplotig	exon	39508058	39508768	99	-	.	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 4778 5488 +
Chr2	stalkie_big_nohaplotig	exon	39509528	39509600	100	-	.	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 4705 4777 +
Chr2	stalkie_big_nohaplotig	exon	39509660	39510003	100	-	.	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 4361 4704 +
Chr2	stalkie_big_nohaplotig	exon	39515175	39515270	100	-	.	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 4265 4360 +
Chr2	stalkie_big_nohaplotig	exon	39515334	39515454	100	-	.	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 4144 4264 +
Chr2	stalkie_big_nohaplotig	exon	39517312	39517457	100	-	.	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 3998 4143 +
Chr2	stalkie_big_nohaplotig	exon	39517530	39519192	99	-	.	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 2335 3997 +
Chr2	stalkie_big_nohaplotig	exon	39519491	39519637	100	-	.	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 2188 2334 +
Chr2	stalkie_big_nohaplotig	exon	39519703	39519870	99	-	.	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 2020 2187 +
Chr2	stalkie_big_nohaplotig	exon	39519928	39520074	100	-	.	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 1873 2019 +
Chr2	stalkie_big_nohaplotig	exon	39520140	39520562	100	-	.	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 1450 1872 +
Chr2	stalkie_big_nohaplotig	exon	39520635	39521226	100	-	.	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 858 1449 +
Chr2	stalkie_big_nohaplotig	exon	39521305	39521552	100	-	.	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 610 857 +
Chr2	stalkie_big_nohaplotig	exon	39521821	39522089	100	-	.	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 341 609 +
Chr2	stalkie_big_nohaplotig	exon	39522266	39522429	100	-	.	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 177 340 +
Chr2	stalkie_big_nohaplotig	exon	39522661	39522748	100	-	.	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 89 176 +
Chr2	stalkie_big_nohaplotig	CDS	39506374	39506447	.	-	1	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 5789 5862 +
Chr2	stalkie_big_nohaplotig	CDS	39506522	39506821	.	-	1	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 5489 5788 +
Chr2	stalkie_big_nohaplotig	CDS	39508058	39508768	.	-	1	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 4778 5488 +
Chr2	stalkie_big_nohaplotig	CDS	39509528	39509600	.	-	2	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 4705 4777 +
Chr2	stalkie_big_nohaplotig	CDS	39509660	39510003	.	-	1	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 4361 4704 +
Chr2	stalkie_big_nohaplotig	CDS	39515175	39515270	.	-	1	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 4265 4360 +
Chr2	stalkie_big_nohaplotig	CDS	39515334	39515454	.	-	2	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 4144 4264 +
Chr2	stalkie_big_nohaplotig	CDS	39517312	39517457	.	-	1	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 3998 4143 +
Chr2	stalkie_big_nohaplotig	CDS	39517530	39519192	.	-	2	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 2335 3997 +
Chr2	stalkie_big_nohaplotig	CDS	39519491	39519637	.	-	2	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 2188 2334 +
Chr2	stalkie_big_nohaplotig	CDS	39519703	39519870	.	-	2	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 2020 2187 +
Chr2	stalkie_big_nohaplotig	CDS	39519928	39520074	.	-	2	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 1873 2019 +
Chr2	stalkie_big_nohaplotig	CDS	39520140	39520562	.	-	2	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 1450 1872 +
Chr2	stalkie_big_nohaplotig	CDS	39520635	39521226	.	-	0	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 858 1449 +
Chr2	stalkie_big_nohaplotig	CDS	39521305	39521552	.	-	2	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 610 857 +
Chr2	stalkie_big_nohaplotig	CDS	39521821	39522089	.	-	1	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 341 609 +
Chr2	stalkie_big_nohaplotig	CDS	39522266	39522429	.	-	0	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 177 340 +
Chr2	stalkie_big_nohaplotig	CDS	39522661	39522748	.	-	1	Parent=FBgn0019968.1.mrna2;Target=FBgn0019968.1 89 176 +
Chr2	gffcl	locus	39510607	39510955	.	+	.	ID=RLOC_00016685;geneIDs=comp112382_c0_seq1.path1;transcripts=comp112382_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39510607	39510955	.	+	.	ID=comp112382_c0_seq1.mrna1;geneID=comp112382_c0_seq1.path1;Name=comp112382_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=348;mismatches=1;indels=0;unknowns=0;Target=comp112382_c0_seq1 349 1 .;CDS_Target=comp112382_c0_seq1 299 222 .;locus=RLOC_00016685
Chr2	stalkie_big_nohaplotig	exon	39510607	39510955	99	+	.	Parent=comp112382_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39510828	39510905	.	+	0	Parent=comp112382_c0_seq1.mrna1
Chr2	gffcl	locus	39511858	39512440	.	-	.	ID=RLOC_00016686;geneIDs=comp145289_c0_seq1.path1;transcripts=comp145289_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39511858	39512440	.	-	.	ID=comp145289_c0_seq1.mrna1;geneID=comp145289_c0_seq1.path1;Name=comp145289_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=583;mismatches=0;indels=0;unknowns=0;Target=comp145289_c0_seq1 583 1 .;CDS_Target=comp145289_c0_seq1 152 3 .;locus=RLOC_00016686
Chr2	stalkie_big_nohaplotig	exon	39511858	39512440	100	-	.	Parent=comp145289_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39512289	39512438	.	-	0	Parent=comp145289_c0_seq1.mrna1
Chr2	gffcl	locus	39513936	39514901	.	-	.	ID=RLOC_00016687;geneIDs=comp140369_c0_seq1.path1;transcripts=comp140369_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39513936	39514901	.	-	.	ID=comp140369_c0_seq1.mrna1;geneID=comp140369_c0_seq1.path1;Name=comp140369_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.8;matches=964;mismatches=2;indels=0;unknowns=0;Target=comp140369_c0_seq1 966 1 .;CDS_Target=comp140369_c0_seq1 293 207 .;locus=RLOC_00016687
Chr2	stalkie_big_nohaplotig	exon	39513936	39514901	99	-	.	Parent=comp140369_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39514609	39514695	.	-	0	Parent=comp140369_c0_seq1.mrna1
Chr2	gffcl	locus	39530660	39531020	.	-	.	ID=RLOC_00016688;geneIDs=comp158313_c0_seq1.path1;transcripts=comp158313_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39530660	39531020	.	-	.	ID=comp158313_c0_seq1.mrna1;geneID=comp158313_c0_seq1.path1;Name=comp158313_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.9;matches=354;mismatches=7;indels=16;unknowns=0;Target=comp158313_c0_seq1 377 1 .;CDS_Target=comp158313_c0_seq1 226 176 .;locus=RLOC_00016688
Chr2	stalkie_big_nohaplotig	exon	39530660	39531020	93	-	.	Parent=comp158313_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39530795	39530845	.	-	0	Parent=comp158313_c0_seq1.mrna1
Chr2	gffcl	locus	39538258	39544678	.	-	.	ID=RLOC_00016689;geneIDs=comp146298_c0_seq1.path1,comp150849_c0_seq1.path1;transcripts=comp150849_c0_seq1.mrna1,comp146298_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39538258	39544678	.	-	.	ID=comp150849_c0_seq1.mrna1;geneID=comp150849_c0_seq1.path1;Name=comp150849_c0_seq1;Dir=indeterminatecoverage=93.5;identity=99.1;matches=669;mismatches=5;indels=1;unknowns=0;locus=RLOC_00016689
Chr2	stalkie_big_nohaplotig	exon	39538258	39538926	99	-	.	Parent=comp150849_c0_seq1.mrna1;Target=comp150849_c0_seq1 722 53 .
Chr2	stalkie_big_nohaplotig	exon	39544674	39544678	100	-	.	Parent=comp150849_c0_seq1.mrna1;Target=comp150849_c0_seq1 52 48 .
Chr2	stalkie_big_nohaplotig	CDS	39538802	39538926	.	-	2	Parent=comp150849_c0_seq1.mrna1;Target=comp150849_c0_seq1 177 53 .
Chr2	stalkie_big_nohaplotig	CDS	39544674	39544677	.	-	0	Parent=comp150849_c0_seq1.mrna1;Target=comp150849_c0_seq1 52 49 .
Chr2	stalkie_big_nohaplotig	mRNA	39538903	39539536	.	-	.	ID=comp146298_c0_seq1.mrna1;geneID=comp146298_c0_seq1.path1;Name=comp146298_c0_seq1;Dir=indeterminatecoverage=98.0;identity=99.7;matches=632;mismatches=1;indels=1;unknowns=0;Target=comp146298_c0_seq1 633 1 .;CDS_Target=comp146298_c0_seq1 55 2 .;locus=RLOC_00016689
Chr2	stalkie_big_nohaplotig	exon	39538903	39539536	99	-	.	Parent=comp146298_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39539482	39539535	.	-	0	Parent=comp146298_c0_seq1.mrna1
Chr2	gffcl	locus	39540045	39541447	.	-	.	ID=RLOC_00016690;geneIDs=FBgn0000556.1.path1;transcripts=FBgn0000556.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39540045	39541447	.	-	.	ID=FBgn0000556.1.mrna1;geneID=FBgn0000556.1.path1;Name=FBgn0000556.1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1401;mismatches=2;indels=0;unknowns=0;Target=FBgn0000556.1 1404 2 .;CDS_Target=FBgn0000556.1 1404 4 .;locus=RLOC_00016690
Chr2	stalkie_big_nohaplotig	exon	39540045	39541447	99	-	.	Parent=FBgn0000556.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39540045	39541445	.	-	0	Parent=FBgn0000556.1.mrna1
Chr2	gffcl	locus	39542291	39543165	.	+	.	ID=RLOC_00016691;geneIDs=comp153195_c1_seq1.path1;transcripts=comp153195_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39542291	39543165	.	+	.	ID=comp153195_c1_seq1.mrna1;geneID=comp153195_c1_seq1.path1;Name=comp153195_c1_seq1;Dir=indeterminatecoverage=98.8;identity=98.9;matches=869;mismatches=6;indels=4;unknowns=0;Target=comp153195_c1_seq1 890 12 .;CDS_Target=comp153195_c1_seq1 370 266 .;locus=RLOC_00016691
Chr2	stalkie_big_nohaplotig	exon	39542291	39543165	98	+	.	Parent=comp153195_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39542545	39542649	.	+	0	Parent=comp153195_c1_seq1.mrna1
Chr2	gffcl	locus	39545886	39546620	.	-	.	ID=RLOC_00016692;geneIDs=FBgn0038577.1.path1;transcripts=FBgn0038577.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39545886	39546620	.	-	.	ID=FBgn0038577.1.mrna1;geneID=FBgn0038577.1.path1;Name=FBgn0038577.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=733;mismatches=2;indels=0;unknowns=0;Target=FBgn0038577.1 735 1 .;locus=RLOC_00016692
Chr2	stalkie_big_nohaplotig	exon	39545886	39546620	99	-	.	Parent=FBgn0038577.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39545886	39546620	.	-	0	Parent=FBgn0038577.1.mrna1
Chr2	gffcl	locus	39550238	39555866	.	+	.	ID=RLOC_00016693;geneIDs=FBgn0033663.1.path1;transcripts=FBgn0033663.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39550238	39555866	.	+	.	ID=FBgn0033663.1.mrna1;geneID=FBgn0033663.1.path1;Name=FBgn0033663.1;Dir=sensecoverage=100.0;identity=99.9;matches=1474;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016693
Chr2	stalkie_big_nohaplotig	exon	39550238	39550392	100	+	.	Parent=FBgn0033663.1.mrna1;Target=FBgn0033663.1 1 155 +
Chr2	stalkie_big_nohaplotig	exon	39550714	39550801	100	+	.	Parent=FBgn0033663.1.mrna1;Target=FBgn0033663.1 156 243 +
Chr2	stalkie_big_nohaplotig	exon	39554410	39554762	99	+	.	Parent=FBgn0033663.1.mrna1;Target=FBgn0033663.1 244 596 +
Chr2	stalkie_big_nohaplotig	exon	39554922	39555038	99	+	.	Parent=FBgn0033663.1.mrna1;Target=FBgn0033663.1 597 713 +
Chr2	stalkie_big_nohaplotig	exon	39555104	39555866	100	+	.	Parent=FBgn0033663.1.mrna1;Target=FBgn0033663.1 714 1476 +
Chr2	stalkie_big_nohaplotig	CDS	39550238	39550392	.	+	0	Parent=FBgn0033663.1.mrna1;Target=FBgn0033663.1 1 155 +
Chr2	stalkie_big_nohaplotig	CDS	39550714	39550801	.	+	1	Parent=FBgn0033663.1.mrna1;Target=FBgn0033663.1 156 243 +
Chr2	stalkie_big_nohaplotig	CDS	39554410	39554762	.	+	0	Parent=FBgn0033663.1.mrna1;Target=FBgn0033663.1 244 596 +
Chr2	stalkie_big_nohaplotig	CDS	39554922	39555038	.	+	1	Parent=FBgn0033663.1.mrna1;Target=FBgn0033663.1 597 713 +
Chr2	stalkie_big_nohaplotig	CDS	39555104	39555866	.	+	1	Parent=FBgn0033663.1.mrna1;Target=FBgn0033663.1 714 1476 +
Chr2	gffcl	locus	39553616	39554326	.	-	.	ID=RLOC_00016694;geneIDs=comp155709_c0_seq1.path1;transcripts=comp155709_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39553616	39554326	.	-	.	ID=comp155709_c0_seq1.mrna1;geneID=comp155709_c0_seq1.path1;Name=comp155709_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=706;mismatches=5;indels=0;unknowns=0;Target=comp155709_c0_seq1 711 1 .;CDS_Target=comp155709_c0_seq1 82 2 .;locus=RLOC_00016694
Chr2	stalkie_big_nohaplotig	exon	39553616	39554326	99	-	.	Parent=comp155709_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39554245	39554325	.	-	0	Parent=comp155709_c0_seq1.mrna1
Chr2	gffcl	locus	39556182	39559085	.	-	.	ID=RLOC_00016695;geneIDs=FBgn0030793.1.path1;transcripts=FBgn0030793.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39556182	39559085	.	-	.	ID=FBgn0030793.1.mrna1;geneID=FBgn0030793.1.path1;Name=FBgn0030793.1;Dir=sensecoverage=100.0;identity=99.8;matches=1162;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016695
Chr2	stalkie_big_nohaplotig	exon	39556182	39556397	100	-	.	Parent=FBgn0030793.1.mrna1;Target=FBgn0030793.1 949 1164 +
Chr2	stalkie_big_nohaplotig	exon	39556461	39556698	99	-	.	Parent=FBgn0030793.1.mrna1;Target=FBgn0030793.1 711 948 +
Chr2	stalkie_big_nohaplotig	exon	39558248	39558392	100	-	.	Parent=FBgn0030793.1.mrna1;Target=FBgn0030793.1 566 710 +
Chr2	stalkie_big_nohaplotig	exon	39558466	39558931	99	-	.	Parent=FBgn0030793.1.mrna1;Target=FBgn0030793.1 100 565 +
Chr2	stalkie_big_nohaplotig	exon	39558987	39559085	100	-	.	Parent=FBgn0030793.1.mrna1;Target=FBgn0030793.1 1 99 +
Chr2	stalkie_big_nohaplotig	CDS	39556182	39556397	.	-	0	Parent=FBgn0030793.1.mrna1;Target=FBgn0030793.1 949 1164 +
Chr2	stalkie_big_nohaplotig	CDS	39556461	39556698	.	-	1	Parent=FBgn0030793.1.mrna1;Target=FBgn0030793.1 711 948 +
Chr2	stalkie_big_nohaplotig	CDS	39558248	39558392	.	-	2	Parent=FBgn0030793.1.mrna1;Target=FBgn0030793.1 566 710 +
Chr2	stalkie_big_nohaplotig	CDS	39558466	39558931	.	-	0	Parent=FBgn0030793.1.mrna1;Target=FBgn0030793.1 100 565 +
Chr2	stalkie_big_nohaplotig	CDS	39558987	39559085	.	-	0	Parent=FBgn0030793.1.mrna1;Target=FBgn0030793.1 1 99 +
Chr2	gffcl	locus	39562484	39563120	.	-	.	ID=RLOC_00016697;geneIDs=FBgn0034535.1.path1;transcripts=FBgn0034535.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39562484	39563120	.	-	.	ID=FBgn0034535.1.mrna1;geneID=FBgn0034535.1.path1;Name=FBgn0034535.1;Dir=sensecoverage=100.0;identity=99.5;matches=573;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016697
Chr2	stalkie_big_nohaplotig	exon	39562484	39562899	99	-	.	Parent=FBgn0034535.1.mrna1;Target=FBgn0034535.1 161 576 +
Chr2	stalkie_big_nohaplotig	exon	39562961	39563120	100	-	.	Parent=FBgn0034535.1.mrna1;Target=FBgn0034535.1 1 160 +
Chr2	stalkie_big_nohaplotig	CDS	39562484	39562899	.	-	2	Parent=FBgn0034535.1.mrna1;Target=FBgn0034535.1 161 576 +
Chr2	stalkie_big_nohaplotig	CDS	39562961	39563120	.	-	0	Parent=FBgn0034535.1.mrna1;Target=FBgn0034535.1 1 160 +
Chr2	gffcl	locus	39564609	39695271	.	.	.	ID=RLOC_00016698;geneIDs=FBgn0034532.1.path1,FBgn0250850.1.path1,comp150760_c0_seq1.path1;transcripts=FBgn0250850.1.mrna1,FBgn0034532.1.mrna1,comp150760_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39564609	39695271	.	+	.	ID=FBgn0250850.1.mrna1;geneID=FBgn0250850.1.path1;Name=FBgn0250850.1;Dir=sensecoverage=61.4;identity=98.1;matches=2096;mismatches=35;indels=6;unknowns=0;locus=RLOC_00016698
Chr2	stalkie_big_nohaplotig	exon	39564609	39564856	99	+	.	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 1 248 +
Chr2	stalkie_big_nohaplotig	exon	39564977	39565875	98	+	.	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 249 1147 +
Chr2	stalkie_big_nohaplotig	exon	39566005	39566079	97	+	.	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 1148 1222 +
Chr2	stalkie_big_nohaplotig	exon	39567445	39567588	98	+	.	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 1223 1366 +
Chr2	stalkie_big_nohaplotig	exon	39567647	39567971	99	+	.	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 1367 1691 +
Chr2	stalkie_big_nohaplotig	exon	39568025	39568190	97	+	.	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 1692 1857 +
Chr2	stalkie_big_nohaplotig	exon	39568993	39569149	100	+	.	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 1858 2014 +
Chr2	stalkie_big_nohaplotig	exon	39583578	39583579	100	+	.	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2015 2016 +
Chr2	stalkie_big_nohaplotig	exon	39597107	39597115	100	+	.	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2017 2025 +
Chr2	stalkie_big_nohaplotig	exon	39623894	39623899	100	+	.	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2035 2040 +
Chr2	stalkie_big_nohaplotig	exon	39630557	39630566	100	+	.	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2041 2050 +
Chr2	stalkie_big_nohaplotig	exon	39645185	39645191	100	+	.	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2051 2057 +
Chr2	stalkie_big_nohaplotig	exon	39651547	39651550	100	+	.	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2058 2061 +
Chr2	stalkie_big_nohaplotig	exon	39654064	39654101	62	+	.	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2068 2109 +
Chr2	stalkie_big_nohaplotig	exon	39655078	39655086	88	+	.	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2110 2118 +
Chr2	stalkie_big_nohaplotig	exon	39662893	39662896	100	+	.	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2119 2122 +
Chr2	stalkie_big_nohaplotig	exon	39663347	39663352	100	+	.	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2123 2128 +
Chr2	stalkie_big_nohaplotig	exon	39681495	39681498	100	+	.	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2129 2132 +
Chr2	stalkie_big_nohaplotig	exon	39687774	39687778	100	+	.	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2133 2137 +
Chr2	stalkie_big_nohaplotig	exon	39691302	39691305	100	+	.	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2138 2141 +
Chr2	stalkie_big_nohaplotig	exon	39695263	39695271	100	+	.	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2142 2150 +
Chr2	stalkie_big_nohaplotig	CDS	39564609	39564856	.	+	0	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 1 248 +
Chr2	stalkie_big_nohaplotig	CDS	39564977	39565875	.	+	1	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 249 1147 +
Chr2	stalkie_big_nohaplotig	CDS	39566005	39566079	.	+	2	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 1148 1222 +
Chr2	stalkie_big_nohaplotig	CDS	39567445	39567588	.	+	2	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 1223 1366 +
Chr2	stalkie_big_nohaplotig	CDS	39567647	39567971	.	+	2	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 1367 1691 +
Chr2	stalkie_big_nohaplotig	CDS	39568025	39568190	.	+	1	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 1692 1857 +
Chr2	stalkie_big_nohaplotig	CDS	39568993	39569149	.	+	0	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 1858 2014 +
Chr2	stalkie_big_nohaplotig	CDS	39583578	39583579	.	+	2	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2015 2016 +
Chr2	stalkie_big_nohaplotig	CDS	39597107	39597115	.	+	0	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2017 2025 +
Chr2	stalkie_big_nohaplotig	CDS	39623894	39623899	.	+	0	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2035 2040 +
Chr2	stalkie_big_nohaplotig	CDS	39630557	39630566	.	+	0	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2041 2050 +
Chr2	stalkie_big_nohaplotig	CDS	39645185	39645191	.	+	2	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2051 2057 +
Chr2	stalkie_big_nohaplotig	CDS	39651547	39651550	.	+	1	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2058 2061 +
Chr2	stalkie_big_nohaplotig	CDS	39654064	39654101	.	+	0	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2068 2109 +
Chr2	stalkie_big_nohaplotig	CDS	39655078	39655086	.	+	1	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2110 2118 +
Chr2	stalkie_big_nohaplotig	CDS	39662893	39662896	.	+	1	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2119 2122 +
Chr2	stalkie_big_nohaplotig	CDS	39663347	39663352	.	+	0	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2123 2128 +
Chr2	stalkie_big_nohaplotig	CDS	39681495	39681498	.	+	0	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2129 2132 +
Chr2	stalkie_big_nohaplotig	CDS	39687774	39687778	.	+	2	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2133 2137 +
Chr2	stalkie_big_nohaplotig	CDS	39691302	39691305	.	+	0	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2138 2141 +
Chr2	stalkie_big_nohaplotig	CDS	39695263	39695269	.	+	2	Parent=FBgn0250850.1.mrna1;Target=FBgn0250850.1 2142 2148 +
Chr2	stalkie_big_nohaplotig	mRNA	39642936	39645872	.	+	.	ID=FBgn0034532.1.mrna1;geneID=FBgn0034532.1.path1;Name=FBgn0034532.1;Dir=sensecoverage=97.0;identity=99.6;matches=1719;mismatches=7;indels=0;unknowns=0;locus=RLOC_00016698
Chr2	stalkie_big_nohaplotig	exon	39642936	39643445	99	+	.	Parent=FBgn0034532.1.mrna1;Target=FBgn0034532.1 1 510 +
Chr2	stalkie_big_nohaplotig	exon	39643506	39643686	99	+	.	Parent=FBgn0034532.1.mrna1;Target=FBgn0034532.1 511 691 +
Chr2	stalkie_big_nohaplotig	exon	39643740	39644089	100	+	.	Parent=FBgn0034532.1.mrna1;Target=FBgn0034532.1 692 1041 +
Chr2	stalkie_big_nohaplotig	exon	39645131	39645379	100	+	.	Parent=FBgn0034532.1.mrna1;Target=FBgn0034532.1 1042 1290 +
Chr2	stalkie_big_nohaplotig	exon	39645437	39645872	99	+	.	Parent=FBgn0034532.1.mrna1;Target=FBgn0034532.1 1291 1726 +
Chr2	stalkie_big_nohaplotig	CDS	39642936	39643445	.	+	0	Parent=FBgn0034532.1.mrna1;Target=FBgn0034532.1 1 510 +
Chr2	stalkie_big_nohaplotig	CDS	39643506	39643686	.	+	0	Parent=FBgn0034532.1.mrna1;Target=FBgn0034532.1 511 691 +
Chr2	stalkie_big_nohaplotig	CDS	39643740	39644089	.	+	2	Parent=FBgn0034532.1.mrna1;Target=FBgn0034532.1 692 1041 +
Chr2	stalkie_big_nohaplotig	CDS	39645131	39645379	.	+	0	Parent=FBgn0034532.1.mrna1;Target=FBgn0034532.1 1042 1290 +
Chr2	stalkie_big_nohaplotig	CDS	39645437	39645872	.	+	0	Parent=FBgn0034532.1.mrna1;Target=FBgn0034532.1 1291 1726 +
Chr2	stalkie_big_nohaplotig	mRNA	39650759	39651801	.	-	.	ID=comp150760_c0_seq1.mrna1;geneID=comp150760_c0_seq1.path1;Name=comp150760_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1042;mismatches=1;indels=0;unknowns=0;Target=comp150760_c0_seq1 1043 1 .;CDS_Target=comp150760_c0_seq1 528 460 .;locus=RLOC_00016698
Chr2	stalkie_big_nohaplotig	exon	39650759	39651801	99	-	.	Parent=comp150760_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39651274	39651342	.	-	0	Parent=comp150760_c0_seq1.mrna1
Chr2	gffcl	locus	39569188	39569240	.	-	.	ID=RLOC_00016699;geneIDs=FBgn0034532.1.path2;transcripts=FBgn0034532.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	39569188	39569240	.	-	.	ID=FBgn0034532.1.mrna2;geneID=FBgn0034532.1.path2;Name=FBgn0034532.1;Dir=indeterminatecoverage=3.0;identity=100.0;matches=53;mismatches=0;indels=0;unknowns=0;Target=FBgn0034532.1 1779 1727 .;locus=RLOC_00016699
Chr2	stalkie_big_nohaplotig	exon	39569188	39569240	100	-	.	Parent=FBgn0034532.1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	39569188	39569240	.	-	1	Parent=FBgn0034532.1.mrna2
Chr2	gffcl	locus	39588738	39591076	.	-	.	ID=RLOC_00016700;geneIDs=FBgn0033669.2.path1;transcripts=FBgn0033669.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39588738	39591076	.	-	.	ID=FBgn0033669.2.mrna1;geneID=FBgn0033669.2.path1;Name=FBgn0033669.2;Dir=sensecoverage=100.0;identity=99.6;matches=1147;mismatches=5;indels=0;unknowns=0;locus=RLOC_00016700
Chr2	stalkie_big_nohaplotig	exon	39588738	39589059	100	-	.	Parent=FBgn0033669.2.mrna1;Target=FBgn0033669.2 831 1152 +
Chr2	stalkie_big_nohaplotig	exon	39589258	39589403	99	-	.	Parent=FBgn0033669.2.mrna1;Target=FBgn0033669.2 685 830 +
Chr2	stalkie_big_nohaplotig	exon	39589463	39589756	100	-	.	Parent=FBgn0033669.2.mrna1;Target=FBgn0033669.2 391 684 +
Chr2	stalkie_big_nohaplotig	exon	39589822	39589878	100	-	.	Parent=FBgn0033669.2.mrna1;Target=FBgn0033669.2 334 390 +
Chr2	stalkie_big_nohaplotig	exon	39590744	39591076	98	-	.	Parent=FBgn0033669.2.mrna1;Target=FBgn0033669.2 1 333 +
Chr2	stalkie_big_nohaplotig	CDS	39588738	39589059	.	-	1	Parent=FBgn0033669.2.mrna1;Target=FBgn0033669.2 831 1152 +
Chr2	stalkie_big_nohaplotig	CDS	39589258	39589403	.	-	0	Parent=FBgn0033669.2.mrna1;Target=FBgn0033669.2 685 830 +
Chr2	stalkie_big_nohaplotig	CDS	39589463	39589756	.	-	0	Parent=FBgn0033669.2.mrna1;Target=FBgn0033669.2 391 684 +
Chr2	stalkie_big_nohaplotig	CDS	39589822	39589878	.	-	0	Parent=FBgn0033669.2.mrna1;Target=FBgn0033669.2 334 390 +
Chr2	stalkie_big_nohaplotig	CDS	39590744	39591076	.	-	0	Parent=FBgn0033669.2.mrna1;Target=FBgn0033669.2 1 333 +
Chr2	gffcl	locus	39592041	39593609	.	-	.	ID=RLOC_00016701;geneIDs=FBgn0034528.1.path1;transcripts=FBgn0034528.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39592041	39593609	.	-	.	ID=FBgn0034528.1.mrna1;geneID=FBgn0034528.1.path1;Name=FBgn0034528.1;Dir=sensecoverage=99.0;identity=97.9;matches=1457;mismatches=31;indels=0;unknowns=0;locus=RLOC_00016701
Chr2	stalkie_big_nohaplotig	exon	39592041	39593449	97	-	.	Parent=FBgn0034528.1.mrna1;Target=FBgn0034528.1 80 1488 +
Chr2	stalkie_big_nohaplotig	exon	39593531	39593609	100	-	.	Parent=FBgn0034528.1.mrna1;Target=FBgn0034528.1 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	39592041	39593449	.	-	2	Parent=FBgn0034528.1.mrna1;Target=FBgn0034528.1 80 1488 +
Chr2	stalkie_big_nohaplotig	CDS	39593531	39593609	.	-	0	Parent=FBgn0034528.1.mrna1;Target=FBgn0034528.1 1 79 +
Chr2	gffcl	locus	39598331	39605060	.	+	.	ID=RLOC_00016702;geneIDs=FBgn0034529.1.path1;transcripts=FBgn0034529.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39598331	39605060	.	+	.	ID=FBgn0034529.1.mrna1;geneID=FBgn0034529.1.path1;Name=FBgn0034529.1;Dir=sensecoverage=100.0;identity=99.7;matches=4984;mismatches=17;indels=0;unknowns=0;locus=RLOC_00016702
Chr2	stalkie_big_nohaplotig	exon	39598331	39598498	100	+	.	Parent=FBgn0034529.1.mrna1;Target=FBgn0034529.1 1 168 +
Chr2	stalkie_big_nohaplotig	exon	39598563	39598760	100	+	.	Parent=FBgn0034529.1.mrna1;Target=FBgn0034529.1 169 366 +
Chr2	stalkie_big_nohaplotig	exon	39599445	39599578	100	+	.	Parent=FBgn0034529.1.mrna1;Target=FBgn0034529.1 367 500 +
Chr2	stalkie_big_nohaplotig	exon	39599633	39603996	99	+	.	Parent=FBgn0034529.1.mrna1;Target=FBgn0034529.1 501 4864 +
Chr2	stalkie_big_nohaplotig	exon	39604924	39605060	100	+	.	Parent=FBgn0034529.1.mrna1;Target=FBgn0034529.1 4865 5001 +
Chr2	stalkie_big_nohaplotig	CDS	39598331	39598498	.	+	0	Parent=FBgn0034529.1.mrna1;Target=FBgn0034529.1 1 168 +
Chr2	stalkie_big_nohaplotig	CDS	39598563	39598760	.	+	0	Parent=FBgn0034529.1.mrna1;Target=FBgn0034529.1 169 366 +
Chr2	stalkie_big_nohaplotig	CDS	39599445	39599578	.	+	0	Parent=FBgn0034529.1.mrna1;Target=FBgn0034529.1 367 500 +
Chr2	stalkie_big_nohaplotig	CDS	39599633	39603996	.	+	1	Parent=FBgn0034529.1.mrna1;Target=FBgn0034529.1 501 4864 +
Chr2	stalkie_big_nohaplotig	CDS	39604924	39605060	.	+	2	Parent=FBgn0034529.1.mrna1;Target=FBgn0034529.1 4865 5001 +
Chr2	gffcl	locus	39605699	39615374	.	-	.	ID=RLOC_00016703;geneIDs=FBgn0034530.1.path1;transcripts=FBgn0034530.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39605699	39615374	.	-	.	ID=FBgn0034530.1.mrna1;geneID=FBgn0034530.1.path1;Name=FBgn0034530.1;Dir=sensecoverage=100.0;identity=99.9;matches=1507;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016703
Chr2	stalkie_big_nohaplotig	exon	39605699	39606372	99	-	.	Parent=FBgn0034530.1.mrna1;Target=FBgn0034530.1 836 1509 +
Chr2	stalkie_big_nohaplotig	exon	39606432	39606751	100	-	.	Parent=FBgn0034530.1.mrna1;Target=FBgn0034530.1 516 835 +
Chr2	stalkie_big_nohaplotig	exon	39608992	39609092	100	-	.	Parent=FBgn0034530.1.mrna1;Target=FBgn0034530.1 415 515 +
Chr2	stalkie_big_nohaplotig	exon	39609216	39609455	100	-	.	Parent=FBgn0034530.1.mrna1;Target=FBgn0034530.1 175 414 +
Chr2	stalkie_big_nohaplotig	exon	39615201	39615374	100	-	.	Parent=FBgn0034530.1.mrna1;Target=FBgn0034530.1 1 174 +
Chr2	stalkie_big_nohaplotig	CDS	39605699	39606372	.	-	2	Parent=FBgn0034530.1.mrna1;Target=FBgn0034530.1 836 1509 +
Chr2	stalkie_big_nohaplotig	CDS	39606432	39606751	.	-	1	Parent=FBgn0034530.1.mrna1;Target=FBgn0034530.1 516 835 +
Chr2	stalkie_big_nohaplotig	CDS	39608992	39609092	.	-	0	Parent=FBgn0034530.1.mrna1;Target=FBgn0034530.1 415 515 +
Chr2	stalkie_big_nohaplotig	CDS	39609216	39609455	.	-	0	Parent=FBgn0034530.1.mrna1;Target=FBgn0034530.1 175 414 +
Chr2	stalkie_big_nohaplotig	CDS	39615201	39615374	.	-	0	Parent=FBgn0034530.1.mrna1;Target=FBgn0034530.1 1 174 +
Chr2	gffcl	locus	39633761	39633960	.	+	.	ID=RLOC_00016704;geneIDs=comp117471_c0_seq1.path1;transcripts=comp117471_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39633761	39633960	.	+	.	ID=comp117471_c0_seq1.mrna1;geneID=comp117471_c0_seq1.path1;Name=comp117471_c0_seq1;Dir=indeterminatecoverage=75.5;identity=100.0;matches=200;mismatches=0;indels=0;unknowns=0;Target=comp117471_c0_seq1 200 1 .;CDS_Target=comp117471_c0_seq1 199 2 .;locus=RLOC_00016704
Chr2	stalkie_big_nohaplotig	exon	39633761	39633960	100	+	.	Parent=comp117471_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39633762	39633959	.	+	0	Parent=comp117471_c0_seq1.mrna1
Chr2	gffcl	locus	39648553	39648785	.	+	.	ID=RLOC_00016705;geneIDs=comp148206_c0_seq1.path1;transcripts=comp148206_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39648553	39648785	.	+	.	ID=comp148206_c0_seq1.mrna1;geneID=comp148206_c0_seq1.path1;Name=comp148206_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=232;mismatches=1;indels=0;unknowns=0;Target=comp148206_c0_seq1 233 1 .;CDS_Target=comp148206_c0_seq1 233 162 .;locus=RLOC_00016705
Chr2	stalkie_big_nohaplotig	exon	39648553	39648785	99	+	.	Parent=comp148206_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39648714	39648785	.	+	0	Parent=comp148206_c0_seq1.mrna1
Chr2	gffcl	locus	39649490	39650533	.	+	.	ID=RLOC_00016706;geneIDs=FBgn0033665.1.path1;transcripts=FBgn0033665.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39649490	39650533	.	+	.	ID=FBgn0033665.1.mrna1;geneID=FBgn0033665.1.path1;Name=FBgn0033665.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1044;mismatches=0;indels=0;unknowns=0;Target=FBgn0033665.1 1044 1 .;locus=RLOC_00016706
Chr2	stalkie_big_nohaplotig	exon	39649490	39650533	100	+	.	Parent=FBgn0033665.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39649490	39650533	.	+	0	Parent=FBgn0033665.1.mrna1
Chr2	gffcl	locus	39742422	39742579	.	+	.	ID=RLOC_00016708;geneIDs=comp1592474_c0_seq1.path2;transcripts=comp1592474_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	39742422	39742579	.	+	.	ID=comp1592474_c0_seq1.mrna2;geneID=comp1592474_c0_seq1.path2;Name=comp1592474_c0_seq1;Dir=indeterminatecoverage=74.2;identity=79.1;matches=125;mismatches=33;indels=0;unknowns=0;Target=comp1592474_c0_seq1 213 56 .;CDS_Target=comp1592474_c0_seq1 81 58 .;locus=RLOC_00016708
Chr2	stalkie_big_nohaplotig	exon	39742422	39742579	79	+	.	Parent=comp1592474_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	39742424	39742447	.	+	0	Parent=comp1592474_c0_seq1.mrna2
Chr2	gffcl	locus	39780265	39893507	.	+	.	ID=RLOC_00016710;geneIDs=FBgn0033817.1.path1,FBgn0260959.1.path1,comp160517_c0_seq1.path1;transcripts=comp160517_c0_seq1.mrna1,FBgn0260959.1.mrna1,FBgn0033817.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39780265	39893507	.	+	.	ID=comp160517_c0_seq1.mrna1;geneID=comp160517_c0_seq1.path1;Name=comp160517_c0_seq1;Dir=sensecoverage=97.6;identity=87.6;matches=3490;mismatches=123;indels=369;unknowns=0;locus=RLOC_00016710
Chr2	stalkie_big_nohaplotig	exon	39780265	39780784	99	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 3 523 +
Chr2	stalkie_big_nohaplotig	exon	39781196	39781454	98	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 524 782 +
Chr2	stalkie_big_nohaplotig	exon	39781511	39781720	100	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 783 992 +
Chr2	stalkie_big_nohaplotig	exon	39784538	39784730	100	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 993 1185 +
Chr2	stalkie_big_nohaplotig	exon	39797283	39797429	100	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 1186 1332 +
Chr2	stalkie_big_nohaplotig	exon	39797510	39797616	99	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 1333 1439 +
Chr2	stalkie_big_nohaplotig	exon	39797678	39799368	99	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 1440 3131 +
Chr2	stalkie_big_nohaplotig	exon	39823363	39823427	55	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 3230 3285 +
Chr2	stalkie_big_nohaplotig	exon	39835799	39835809	72	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 3371 3381 +
Chr2	stalkie_big_nohaplotig	exon	39840375	39840386	91	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 3441 3452 +
Chr2	stalkie_big_nohaplotig	exon	39843291	39843298	100	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 3453 3460 +
Chr2	stalkie_big_nohaplotig	exon	39845401	39845435	54	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 3462 3509 +
Chr2	stalkie_big_nohaplotig	exon	39845608	39845614	85	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 3510 3516 +
Chr2	stalkie_big_nohaplotig	exon	39845785	39845791	85	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 3517 3523 +
Chr2	stalkie_big_nohaplotig	exon	39846027	39846037	90	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 3524 3534 +
Chr2	stalkie_big_nohaplotig	exon	39846095	39846189	35	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 3535 3575 +
Chr2	stalkie_big_nohaplotig	exon	39846240	39846406	34	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 3576 3659 +
Chr2	stalkie_big_nohaplotig	exon	39846488	39846615	18	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 3660 3684 +
Chr2	stalkie_big_nohaplotig	exon	39853474	39853504	43	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 3685 3735 +
Chr2	stalkie_big_nohaplotig	exon	39867371	39867383	100	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 3736 3748 +
Chr2	stalkie_big_nohaplotig	exon	39872126	39872175	50	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 3756 3825 +
Chr2	stalkie_big_nohaplotig	exon	39874167	39874210	18	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 3910 3917 +
Chr2	stalkie_big_nohaplotig	exon	39878710	39878760	48	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 3918 3987 +
Chr2	stalkie_big_nohaplotig	exon	39884703	39884714	100	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 3988 3999 +
Chr2	stalkie_big_nohaplotig	exon	39887612	39887613	100	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 4019 4020 +
Chr2	stalkie_big_nohaplotig	exon	39888088	39888094	100	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 4021 4027 +
Chr2	stalkie_big_nohaplotig	exon	39892247	39892254	87	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 4028 4035 +
Chr2	stalkie_big_nohaplotig	exon	39893001	39893006	83	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 4036 4041 +
Chr2	stalkie_big_nohaplotig	exon	39893505	39893507	100	+	.	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 4042 4044 +
Chr2	stalkie_big_nohaplotig	CDS	39780406	39780784	.	+	0	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 145 523 +
Chr2	stalkie_big_nohaplotig	CDS	39781196	39781454	.	+	2	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 524 782 +
Chr2	stalkie_big_nohaplotig	CDS	39781511	39781720	.	+	1	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 783 992 +
Chr2	stalkie_big_nohaplotig	CDS	39784538	39784730	.	+	1	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 993 1185 +
Chr2	stalkie_big_nohaplotig	CDS	39797283	39797429	.	+	0	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 1186 1332 +
Chr2	stalkie_big_nohaplotig	CDS	39797510	39797616	.	+	0	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 1333 1439 +
Chr2	stalkie_big_nohaplotig	CDS	39797678	39799333	.	+	1	Parent=comp160517_c0_seq1.mrna1;Target=comp160517_c0_seq1 1440 3096 +
Chr2	stalkie_big_nohaplotig	mRNA	39780953	39799330	.	+	.	ID=FBgn0260959.1.mrna1;geneID=FBgn0260959.1.path1;Name=FBgn0260959.1;Dir=sensecoverage=100.0;identity=99.5;matches=2585;mismatches=13;indels=1;unknowns=14;locus=RLOC_00016710
Chr2	stalkie_big_nohaplotig	exon	39780953	39780995	100	+	.	Parent=FBgn0260959.1.mrna1;Target=FBgn0260959.1 1 43 +
Chr2	stalkie_big_nohaplotig	exon	39781196	39781454	98	+	.	Parent=FBgn0260959.1.mrna1;Target=FBgn0260959.1 44 302 +
Chr2	stalkie_big_nohaplotig	exon	39781511	39781720	100	+	.	Parent=FBgn0260959.1.mrna1;Target=FBgn0260959.1 303 512 +
Chr2	stalkie_big_nohaplotig	exon	39784538	39784730	100	+	.	Parent=FBgn0260959.1.mrna1;Target=FBgn0260959.1 513 705 +
Chr2	stalkie_big_nohaplotig	exon	39797283	39797429	100	+	.	Parent=FBgn0260959.1.mrna1;Target=FBgn0260959.1 706 852 +
Chr2	stalkie_big_nohaplotig	exon	39797510	39797616	99	+	.	Parent=FBgn0260959.1.mrna1;Target=FBgn0260959.1 853 959 +
Chr2	stalkie_big_nohaplotig	exon	39797678	39799330	99	+	.	Parent=FBgn0260959.1.mrna1;Target=FBgn0260959.1 960 2613 +
Chr2	stalkie_big_nohaplotig	CDS	39780953	39780995	.	+	0	Parent=FBgn0260959.1.mrna1;Target=FBgn0260959.1 1 43 +
Chr2	stalkie_big_nohaplotig	CDS	39781196	39781454	.	+	2	Parent=FBgn0260959.1.mrna1;Target=FBgn0260959.1 44 302 +
Chr2	stalkie_big_nohaplotig	CDS	39781511	39781720	.	+	1	Parent=FBgn0260959.1.mrna1;Target=FBgn0260959.1 303 512 +
Chr2	stalkie_big_nohaplotig	CDS	39784538	39784730	.	+	1	Parent=FBgn0260959.1.mrna1;Target=FBgn0260959.1 513 705 +
Chr2	stalkie_big_nohaplotig	CDS	39797283	39797429	.	+	0	Parent=FBgn0260959.1.mrna1;Target=FBgn0260959.1 706 852 +
Chr2	stalkie_big_nohaplotig	CDS	39797510	39797616	.	+	0	Parent=FBgn0260959.1.mrna1;Target=FBgn0260959.1 853 959 +
Chr2	stalkie_big_nohaplotig	CDS	39797678	39799330	.	+	1	Parent=FBgn0260959.1.mrna1;Target=FBgn0260959.1 960 2613 +
Chr2	stalkie_big_nohaplotig	mRNA	39852292	39855357	.	+	.	ID=FBgn0033817.1.mrna1;geneID=FBgn0033817.1.path1;Name=FBgn0033817.1;Dir=sensecoverage=100.0;identity=100.0;matches=792;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016710
Chr2	stalkie_big_nohaplotig	exon	39852292	39852395	100	+	.	Parent=FBgn0033817.1.mrna1;Target=FBgn0033817.1 1 104 +
Chr2	stalkie_big_nohaplotig	exon	39853444	39853594	100	+	.	Parent=FBgn0033817.1.mrna1;Target=FBgn0033817.1 105 255 +
Chr2	stalkie_big_nohaplotig	exon	39853663	39853875	100	+	.	Parent=FBgn0033817.1.mrna1;Target=FBgn0033817.1 256 468 +
Chr2	stalkie_big_nohaplotig	exon	39853938	39854060	100	+	.	Parent=FBgn0033817.1.mrna1;Target=FBgn0033817.1 469 591 +
Chr2	stalkie_big_nohaplotig	exon	39855157	39855357	100	+	.	Parent=FBgn0033817.1.mrna1;Target=FBgn0033817.1 592 792 +
Chr2	stalkie_big_nohaplotig	CDS	39852292	39852395	.	+	0	Parent=FBgn0033817.1.mrna1;Target=FBgn0033817.1 1 104 +
Chr2	stalkie_big_nohaplotig	CDS	39853444	39853594	.	+	1	Parent=FBgn0033817.1.mrna1;Target=FBgn0033817.1 105 255 +
Chr2	stalkie_big_nohaplotig	CDS	39853663	39853875	.	+	0	Parent=FBgn0033817.1.mrna1;Target=FBgn0033817.1 256 468 +
Chr2	stalkie_big_nohaplotig	CDS	39853938	39854060	.	+	0	Parent=FBgn0033817.1.mrna1;Target=FBgn0033817.1 469 591 +
Chr2	stalkie_big_nohaplotig	CDS	39855157	39855357	.	+	0	Parent=FBgn0033817.1.mrna1;Target=FBgn0033817.1 592 792 +
Chr2	gffcl	locus	39784179	39784435	.	-	.	ID=RLOC_00016711;geneIDs=comp150205_c0_seq1.path1;transcripts=comp150205_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39784179	39784435	.	-	.	ID=comp150205_c0_seq1.mrna1;geneID=comp150205_c0_seq1.path1;Name=comp150205_c0_seq1;Dir=indeterminatecoverage=99.6;identity=93.0;matches=240;mismatches=17;indels=1;unknowns=0;Target=comp150205_c0_seq1 259 2 .;CDS_Target=comp150205_c0_seq1 259 185 .;locus=RLOC_00016711
Chr2	stalkie_big_nohaplotig	exon	39784179	39784435	93	-	.	Parent=comp150205_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39784179	39784252	.	-	0	Parent=comp150205_c0_seq1.mrna1
Chr2	gffcl	locus	39789236	39790279	.	-	.	ID=RLOC_00016712;geneIDs=FBgn0033665.1.path2;transcripts=FBgn0033665.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	39789236	39790279	.	-	.	ID=FBgn0033665.1.mrna2;geneID=FBgn0033665.1.path2;Name=FBgn0033665.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1044;mismatches=0;indels=0;unknowns=0;Target=FBgn0033665.1 1044 1 .;locus=RLOC_00016712
Chr2	stalkie_big_nohaplotig	exon	39789236	39790279	100	-	.	Parent=FBgn0033665.1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	39789236	39790279	.	-	0	Parent=FBgn0033665.1.mrna2
Chr2	gffcl	locus	39790987	39791219	.	-	.	ID=RLOC_00016713;geneIDs=comp148206_c0_seq1.path2;transcripts=comp148206_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	39790987	39791219	.	-	.	ID=comp148206_c0_seq1.mrna2;geneID=comp148206_c0_seq1.path2;Name=comp148206_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=232;mismatches=1;indels=0;unknowns=0;Target=comp148206_c0_seq1 233 1 .;CDS_Target=comp148206_c0_seq1 233 162 .;locus=RLOC_00016713
Chr2	stalkie_big_nohaplotig	exon	39790987	39791219	99	-	.	Parent=comp148206_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	39790987	39791058	.	-	0	Parent=comp148206_c0_seq1.mrna2
Chr2	gffcl	locus	39799877	39800779	.	-	.	ID=RLOC_00016714;geneIDs=comp154456_c0_seq1.path1;transcripts=comp154456_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39799877	39800779	.	-	.	ID=comp154456_c0_seq1.mrna1;geneID=comp154456_c0_seq1.path1;Name=comp154456_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=893;mismatches=10;indels=1;unknowns=0;Target=comp154456_c0_seq1 904 1 .;CDS_Target=comp154456_c0_seq1 756 625 .;locus=RLOC_00016714
Chr2	stalkie_big_nohaplotig	exon	39799877	39800779	98	-	.	Parent=comp154456_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39800024	39800155	.	-	0	Parent=comp154456_c0_seq1.mrna1
Chr2	gffcl	locus	39809365	39819226	.	-	.	ID=RLOC_00016716;geneIDs=comp156350_c0_seq1.path1;transcripts=comp156350_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39809365	39819226	.	-	.	ID=comp156350_c0_seq1.mrna1;geneID=comp156350_c0_seq1.path1;Name=comp156350_c0_seq1;Dir=antisensecoverage=39.9;identity=98.9;matches=694;mismatches=8;indels=0;unknowns=0;Target=comp156350_c0_seq1 1427 1624 .;locus=RLOC_00016716
Chr2	stalkie_big_nohaplotig	exon	39809365	39809549	95	-	.	Parent=comp156350_c0_seq1.mrna1;Target=comp156350_c0_seq1 1057 1241 -
Chr2	stalkie_big_nohaplotig	exon	39818710	39819226	100	-	.	Parent=comp156350_c0_seq1.mrna1;Target=comp156350_c0_seq1 1242 1758 -
Chr2	stalkie_big_nohaplotig	CDS	39818895	39819092	.	-	0	Parent=comp156350_c0_seq1.mrna1
Chr2	gffcl	locus	39842099	39843066	.	.	.	ID=RLOC_00016717;geneIDs=FBgn0002789.1.path1,comp135331_c0_seq1.path1;transcripts=FBgn0002789.1.mrna1,comp135331_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39842099	39843066	.	+	.	ID=FBgn0002789.1.mrna1;geneID=FBgn0002789.1.path1;Name=FBgn0002789.1;Dir=sensecoverage=100.0;identity=100.0;matches=642;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016717
Chr2	stalkie_big_nohaplotig	exon	39842099	39842218	100	+	.	Parent=FBgn0002789.1.mrna1;Target=FBgn0002789.1 1 120 +
Chr2	stalkie_big_nohaplotig	exon	39842461	39842793	100	+	.	Parent=FBgn0002789.1.mrna1;Target=FBgn0002789.1 121 453 +
Chr2	stalkie_big_nohaplotig	exon	39842878	39843066	100	+	.	Parent=FBgn0002789.1.mrna1;Target=FBgn0002789.1 454 642 +
Chr2	stalkie_big_nohaplotig	CDS	39842099	39842218	.	+	0	Parent=FBgn0002789.1.mrna1;Target=FBgn0002789.1 1 120 +
Chr2	stalkie_big_nohaplotig	CDS	39842461	39842793	.	+	0	Parent=FBgn0002789.1.mrna1;Target=FBgn0002789.1 121 453 +
Chr2	stalkie_big_nohaplotig	CDS	39842878	39843066	.	+	0	Parent=FBgn0002789.1.mrna1;Target=FBgn0002789.1 454 642 +
Chr2	stalkie_big_nohaplotig	mRNA	39842197	39842480	.	-	.	ID=comp135331_c0_seq1.mrna1;geneID=comp135331_c0_seq1.path1;Name=comp135331_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=284;mismatches=0;indels=0;unknowns=0;Target=comp135331_c0_seq1 284 1 .;CDS_Target=comp135331_c0_seq1 194 126 .;locus=RLOC_00016717
Chr2	stalkie_big_nohaplotig	exon	39842197	39842480	100	-	.	Parent=comp135331_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39842287	39842355	.	-	0	Parent=comp135331_c0_seq1.mrna1
Chr2	gffcl	locus	39843426	39843997	.	+	.	ID=RLOC_00016718;geneIDs=comp143778_c0_seq1.path1;transcripts=comp143778_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39843426	39843997	.	+	.	ID=comp143778_c0_seq1.mrna1;geneID=comp143778_c0_seq1.path1;Name=comp143778_c0_seq1;Dir=indeterminatecoverage=99.3;identity=93.7;matches=568;mismatches=4;indels=34;unknowns=0;Target=comp143778_c0_seq1 610 5 .;CDS_Target=comp143778_c0_seq1 533 408 .;locus=RLOC_00016718
Chr2	stalkie_big_nohaplotig	exon	39843426	39843997	93	+	.	Parent=comp143778_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39843795	39843920	.	+	0	Parent=comp143778_c0_seq1.mrna1
Chr2	gffcl	locus	39847813	39848311	.	+	.	ID=RLOC_00016719;geneIDs=FBgn0033815.1.path1;transcripts=FBgn0033815.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39847813	39848311	.	+	.	ID=FBgn0033815.1.mrna1;geneID=FBgn0033815.1.path1;Name=FBgn0033815.1;Dir=indeterminatecoverage=58.8;identity=100.0;matches=499;mismatches=0;indels=0;unknowns=0;Target=FBgn0033815.1 849 351 .;CDS_Target=FBgn0033815.1 849 352 .;locus=RLOC_00016719
Chr2	stalkie_big_nohaplotig	exon	39847813	39848311	100	+	.	Parent=FBgn0033815.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39847814	39848311	.	+	0	Parent=FBgn0033815.1.mrna1
Chr2	gffcl	locus	39849682	39851786	.	-	.	ID=RLOC_00016720;geneIDs=FBgn0033816.1.path1;transcripts=FBgn0033816.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39849682	39851786	.	-	.	ID=FBgn0033816.1.mrna1;geneID=FBgn0033816.1.path1;Name=FBgn0033816.1;Dir=sensecoverage=100.0;identity=99.9;matches=1982;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016720
Chr2	stalkie_big_nohaplotig	exon	39849682	39850914	99	-	.	Parent=FBgn0033816.1.mrna1;Target=FBgn0033816.1 751 1983 +
Chr2	stalkie_big_nohaplotig	exon	39850968	39851363	100	-	.	Parent=FBgn0033816.1.mrna1;Target=FBgn0033816.1 355 750 +
Chr2	stalkie_big_nohaplotig	exon	39851433	39851786	100	-	.	Parent=FBgn0033816.1.mrna1;Target=FBgn0033816.1 1 354 +
Chr2	stalkie_big_nohaplotig	CDS	39849682	39850914	.	-	0	Parent=FBgn0033816.1.mrna1;Target=FBgn0033816.1 751 1983 +
Chr2	stalkie_big_nohaplotig	CDS	39850968	39851363	.	-	0	Parent=FBgn0033816.1.mrna1;Target=FBgn0033816.1 355 750 +
Chr2	stalkie_big_nohaplotig	CDS	39851433	39851786	.	-	0	Parent=FBgn0033816.1.mrna1;Target=FBgn0033816.1 1 354 +
Chr2	gffcl	locus	39855769	39860928	.	+	.	ID=RLOC_00016721;geneIDs=ORF51.path1;transcripts=ORF51.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39855769	39860928	.	+	.	ID=ORF51.mrna1;geneID=ORF51.path1;Name=ORF51;Dir=sensecoverage=99.9;identity=100.0;matches=3402;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016721
Chr2	stalkie_big_nohaplotig	exon	39855769	39855978	100	+	.	Parent=ORF51.mrna1;Target=ORF51 1 210 +
Chr2	stalkie_big_nohaplotig	exon	39856044	39856166	100	+	.	Parent=ORF51.mrna1;Target=ORF51 211 333 +
Chr2	stalkie_big_nohaplotig	exon	39857733	39857880	100	+	.	Parent=ORF51.mrna1;Target=ORF51 334 481 +
Chr2	stalkie_big_nohaplotig	exon	39857950	39858150	100	+	.	Parent=ORF51.mrna1;Target=ORF51 482 682 +
Chr2	stalkie_big_nohaplotig	exon	39858209	39860928	100	+	.	Parent=ORF51.mrna1;Target=ORF51 683 3402 +
Chr2	stalkie_big_nohaplotig	CDS	39855769	39855978	.	+	0	Parent=ORF51.mrna1;Target=ORF51 1 210 +
Chr2	stalkie_big_nohaplotig	CDS	39856044	39856166	.	+	0	Parent=ORF51.mrna1;Target=ORF51 211 333 +
Chr2	stalkie_big_nohaplotig	CDS	39857733	39857880	.	+	0	Parent=ORF51.mrna1;Target=ORF51 334 481 +
Chr2	stalkie_big_nohaplotig	CDS	39857950	39858150	.	+	2	Parent=ORF51.mrna1;Target=ORF51 482 682 +
Chr2	stalkie_big_nohaplotig	CDS	39858209	39860928	.	+	2	Parent=ORF51.mrna1;Target=ORF51 683 3402 +
Chr2	gffcl	locus	39856453	39857724	.	+	.	ID=RLOC_00016722;geneIDs=comp79344_c0_seq1.path1;transcripts=comp79344_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39856453	39857724	.	+	.	ID=comp79344_c0_seq1.mrna1;geneID=comp79344_c0_seq1.path1;Name=comp79344_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=1271;mismatches=1;indels=17;unknowns=0;Target=comp79344_c0_seq1 1289 1 .;CDS_Target=comp79344_c0_seq1 154 2 .;locus=RLOC_00016722
Chr2	stalkie_big_nohaplotig	exon	39856453	39857724	98	+	.	Parent=comp79344_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39856454	39856606	.	+	0	Parent=comp79344_c0_seq1.mrna1
Chr2	gffcl	locus	39863590	39864159	.	+	.	ID=RLOC_00016723;geneIDs=FBgn0033378.1.path1;transcripts=FBgn0033378.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39863590	39864159	.	+	.	ID=FBgn0033378.1.mrna1;geneID=FBgn0033378.1.path1;Name=FBgn0033378.1;Dir=sensecoverage=100.0;identity=100.0;matches=501;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016723
Chr2	stalkie_big_nohaplotig	exon	39863590	39863653	100	+	.	Parent=FBgn0033378.1.mrna1;Target=FBgn0033378.1 1 64 +
Chr2	stalkie_big_nohaplotig	exon	39863723	39864159	100	+	.	Parent=FBgn0033378.1.mrna1;Target=FBgn0033378.1 65 501 +
Chr2	stalkie_big_nohaplotig	CDS	39863590	39863653	.	+	0	Parent=FBgn0033378.1.mrna1;Target=FBgn0033378.1 1 64 +
Chr2	stalkie_big_nohaplotig	CDS	39863723	39864159	.	+	2	Parent=FBgn0033378.1.mrna1;Target=FBgn0033378.1 65 501 +
Chr2	gffcl	locus	39864434	39866774	.	-	.	ID=RLOC_00016724;geneIDs=FBgn0033379.1.path1;transcripts=FBgn0033379.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39864434	39866774	.	-	.	ID=FBgn0033379.1.mrna1;geneID=FBgn0033379.1.path1;Name=FBgn0033379.1;Dir=sensecoverage=100.0;identity=100.0;matches=2172;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016724
Chr2	stalkie_big_nohaplotig	exon	39864434	39865957	100	-	.	Parent=FBgn0033379.1.mrna1;Target=FBgn0033379.1 649 2172 +
Chr2	stalkie_big_nohaplotig	exon	39866018	39866179	100	-	.	Parent=FBgn0033379.1.mrna1;Target=FBgn0033379.1 487 648 +
Chr2	stalkie_big_nohaplotig	exon	39866235	39866516	100	-	.	Parent=FBgn0033379.1.mrna1;Target=FBgn0033379.1 205 486 +
Chr2	stalkie_big_nohaplotig	exon	39866571	39866774	100	-	.	Parent=FBgn0033379.1.mrna1;Target=FBgn0033379.1 1 204 +
Chr2	stalkie_big_nohaplotig	CDS	39864434	39865957	.	-	0	Parent=FBgn0033379.1.mrna1;Target=FBgn0033379.1 649 2172 +
Chr2	stalkie_big_nohaplotig	CDS	39866018	39866179	.	-	0	Parent=FBgn0033379.1.mrna1;Target=FBgn0033379.1 487 648 +
Chr2	stalkie_big_nohaplotig	CDS	39866235	39866516	.	-	0	Parent=FBgn0033379.1.mrna1;Target=FBgn0033379.1 205 486 +
Chr2	stalkie_big_nohaplotig	CDS	39866571	39866774	.	-	0	Parent=FBgn0033379.1.mrna1;Target=FBgn0033379.1 1 204 +
Chr2	gffcl	locus	39875445	39876024	.	+	.	ID=RLOC_00016726;geneIDs=FBgn0034729.1.path1;transcripts=FBgn0034729.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39875445	39876024	.	+	.	ID=FBgn0034729.1.mrna1;geneID=FBgn0034729.1.path1;Name=FBgn0034729.1;Dir=sensecoverage=60.6;identity=100.0;matches=504;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016726
Chr2	stalkie_big_nohaplotig	exon	39875445	39875682	100	+	.	Parent=FBgn0034729.1.mrna1;Target=FBgn0034729.1 1 238 +
Chr2	stalkie_big_nohaplotig	exon	39875759	39876024	100	+	.	Parent=FBgn0034729.1.mrna1;Target=FBgn0034729.1 239 504 +
Chr2	stalkie_big_nohaplotig	CDS	39875445	39875682	.	+	0	Parent=FBgn0034729.1.mrna1;Target=FBgn0034729.1 1 238 +
Chr2	stalkie_big_nohaplotig	CDS	39875759	39876024	.	+	2	Parent=FBgn0034729.1.mrna1;Target=FBgn0034729.1 239 504 +
Chr2	gffcl	locus	39923379	39936531	.	+	.	ID=RLOC_00016727;geneIDs=FBgn0033668.1.path2,comp113742_c0_seq1.path1;transcripts=FBgn0033668.1.mrna2,comp113742_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39923379	39936531	.	+	.	ID=FBgn0033668.1.mrna2;geneID=FBgn0033668.1.path2;Name=FBgn0033668.1;Dir=sensecoverage=82.5;identity=99.8;matches=1325;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016727
Chr2	stalkie_big_nohaplotig	exon	39923379	39923451	100	+	.	Parent=FBgn0033668.1.mrna2;Target=FBgn0033668.1 282 354 +
Chr2	stalkie_big_nohaplotig	exon	39928041	39928208	100	+	.	Parent=FBgn0033668.1.mrna2;Target=FBgn0033668.1 355 522 +
Chr2	stalkie_big_nohaplotig	exon	39928375	39928573	100	+	.	Parent=FBgn0033668.1.mrna2;Target=FBgn0033668.1 523 721 +
Chr2	stalkie_big_nohaplotig	exon	39929625	39929989	100	+	.	Parent=FBgn0033668.1.mrna2;Target=FBgn0033668.1 722 1086 +
Chr2	stalkie_big_nohaplotig	exon	39933678	39933762	100	+	.	Parent=FBgn0033668.1.mrna2;Target=FBgn0033668.1 1087 1171 +
Chr2	stalkie_big_nohaplotig	exon	39933940	39934269	99	+	.	Parent=FBgn0033668.1.mrna2;Target=FBgn0033668.1 1172 1501 +
Chr2	stalkie_big_nohaplotig	exon	39936425	39936531	99	+	.	Parent=FBgn0033668.1.mrna2;Target=FBgn0033668.1 1502 1608 +
Chr2	stalkie_big_nohaplotig	CDS	39923379	39923451	.	+	2	Parent=FBgn0033668.1.mrna2;Target=FBgn0033668.1 282 354 +
Chr2	stalkie_big_nohaplotig	CDS	39928041	39928208	.	+	1	Parent=FBgn0033668.1.mrna2;Target=FBgn0033668.1 355 522 +
Chr2	stalkie_big_nohaplotig	CDS	39928375	39928573	.	+	1	Parent=FBgn0033668.1.mrna2;Target=FBgn0033668.1 523 721 +
Chr2	stalkie_big_nohaplotig	CDS	39929625	39929989	.	+	0	Parent=FBgn0033668.1.mrna2;Target=FBgn0033668.1 722 1086 +
Chr2	stalkie_big_nohaplotig	CDS	39933678	39933762	.	+	1	Parent=FBgn0033668.1.mrna2;Target=FBgn0033668.1 1087 1171 +
Chr2	stalkie_big_nohaplotig	CDS	39933940	39934269	.	+	0	Parent=FBgn0033668.1.mrna2;Target=FBgn0033668.1 1172 1501 +
Chr2	stalkie_big_nohaplotig	CDS	39936425	39936531	.	+	0	Parent=FBgn0033668.1.mrna2;Target=FBgn0033668.1 1502 1608 +
Chr2	stalkie_big_nohaplotig	mRNA	39934253	39936133	.	+	.	ID=comp113742_c0_seq1.mrna1;geneID=comp113742_c0_seq1.path1;Name=comp113742_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1880;mismatches=1;indels=0;unknowns=0;Target=comp113742_c0_seq1 1881 1 .;CDS_Target=comp113742_c0_seq1 1558 2 .;locus=RLOC_00016727
Chr2	stalkie_big_nohaplotig	exon	39934253	39936133	99	+	.	Parent=comp113742_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39934254	39935810	.	+	0	Parent=comp113742_c0_seq1.mrna1
Chr2	gffcl	locus	39936686	39937251	.	-	.	ID=RLOC_00016728;geneIDs=comp112868_c0_seq1.path1;transcripts=comp112868_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39936686	39937251	.	-	.	ID=comp112868_c0_seq1.mrna1;geneID=comp112868_c0_seq1.path1;Name=comp112868_c0_seq1;Dir=indeterminatecoverage=99.1;identity=100.0;matches=566;mismatches=0;indels=0;unknowns=0;Target=comp112868_c0_seq1 566 1 .;CDS_Target=comp112868_c0_seq1 135 40 .;locus=RLOC_00016728
Chr2	stalkie_big_nohaplotig	exon	39936686	39937251	100	-	.	Parent=comp112868_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39937117	39937212	.	-	0	Parent=comp112868_c0_seq1.mrna1
Chr2	gffcl	locus	39937638	39937902	.	+	.	ID=RLOC_00016729;geneIDs=comp129805_c0_seq1.path1;transcripts=comp129805_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39937638	39937902	.	+	.	ID=comp129805_c0_seq1.mrna1;geneID=comp129805_c0_seq1.path1;Name=comp129805_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=261;mismatches=3;indels=1;unknowns=0;Target=comp129805_c0_seq1 264 1 .;CDS_Target=comp129805_c0_seq1 26 3 .;locus=RLOC_00016729
Chr2	stalkie_big_nohaplotig	exon	39937638	39937902	98	+	.	Parent=comp129805_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39937640	39937664	.	+	0	Parent=comp129805_c0_seq1.mrna1
Chr2	gffcl	locus	39939060	39940995	.	-	.	ID=RLOC_00016730;geneIDs=FBgn0033669.4.path1;transcripts=FBgn0033669.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39939060	39940995	.	-	.	ID=FBgn0033669.4.mrna1;geneID=FBgn0033669.4.path1;Name=FBgn0033669.4;Dir=sensecoverage=100.0;identity=99.5;matches=1081;mismatches=5;indels=0;unknowns=0;locus=RLOC_00016730
Chr2	stalkie_big_nohaplotig	exon	39939060	39939624	99	-	.	Parent=FBgn0033669.4.mrna1;Target=FBgn0033669.4 522 1086 +
Chr2	stalkie_big_nohaplotig	exon	39939696	39939802	99	-	.	Parent=FBgn0033669.4.mrna1;Target=FBgn0033669.4 415 521 +
Chr2	stalkie_big_nohaplotig	exon	39939864	39940124	99	-	.	Parent=FBgn0033669.4.mrna1;Target=FBgn0033669.4 154 414 +
Chr2	stalkie_big_nohaplotig	exon	39940188	39940244	98	-	.	Parent=FBgn0033669.4.mrna1;Target=FBgn0033669.4 97 153 +
Chr2	stalkie_big_nohaplotig	exon	39940900	39940995	100	-	.	Parent=FBgn0033669.4.mrna1;Target=FBgn0033669.4 1 96 +
Chr2	stalkie_big_nohaplotig	CDS	39939060	39939624	.	-	1	Parent=FBgn0033669.4.mrna1;Target=FBgn0033669.4 522 1086 +
Chr2	stalkie_big_nohaplotig	CDS	39939696	39939802	.	-	0	Parent=FBgn0033669.4.mrna1;Target=FBgn0033669.4 415 521 +
Chr2	stalkie_big_nohaplotig	CDS	39939864	39940124	.	-	0	Parent=FBgn0033669.4.mrna1;Target=FBgn0033669.4 154 414 +
Chr2	stalkie_big_nohaplotig	CDS	39940188	39940244	.	-	0	Parent=FBgn0033669.4.mrna1;Target=FBgn0033669.4 97 153 +
Chr2	stalkie_big_nohaplotig	CDS	39940900	39940995	.	-	0	Parent=FBgn0033669.4.mrna1;Target=FBgn0033669.4 1 96 +
Chr2	gffcl	locus	39942697	39945434	.	-	.	ID=RLOC_00016731;geneIDs=FBgn0033669.3.path1,comp149557_c0_seq1.path1;transcripts=FBgn0033669.3.mrna1,comp149557_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39942697	39945434	.	-	.	ID=FBgn0033669.3.mrna1;geneID=FBgn0033669.3.path1;Name=FBgn0033669.3;Dir=sensecoverage=100.0;identity=99.5;matches=1269;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016731
Chr2	stalkie_big_nohaplotig	exon	39942697	39943294	99	-	.	Parent=FBgn0033669.3.mrna1;Target=FBgn0033669.3 678 1275 +
Chr2	stalkie_big_nohaplotig	exon	39943346	39943446	99	-	.	Parent=FBgn0033669.3.mrna1;Target=FBgn0033669.3 577 677 +
Chr2	stalkie_big_nohaplotig	exon	39943508	39943771	100	-	.	Parent=FBgn0033669.3.mrna1;Target=FBgn0033669.3 313 576 +
Chr2	stalkie_big_nohaplotig	exon	39944946	39945002	100	-	.	Parent=FBgn0033669.3.mrna1;Target=FBgn0033669.3 256 312 +
Chr2	stalkie_big_nohaplotig	exon	39945180	39945434	100	-	.	Parent=FBgn0033669.3.mrna1;Target=FBgn0033669.3 1 255 +
Chr2	stalkie_big_nohaplotig	CDS	39942697	39943294	.	-	1	Parent=FBgn0033669.3.mrna1;Target=FBgn0033669.3 678 1275 +
Chr2	stalkie_big_nohaplotig	CDS	39943346	39943446	.	-	0	Parent=FBgn0033669.3.mrna1;Target=FBgn0033669.3 577 677 +
Chr2	stalkie_big_nohaplotig	CDS	39943508	39943771	.	-	0	Parent=FBgn0033669.3.mrna1;Target=FBgn0033669.3 313 576 +
Chr2	stalkie_big_nohaplotig	CDS	39944946	39945002	.	-	0	Parent=FBgn0033669.3.mrna1;Target=FBgn0033669.3 256 312 +
Chr2	stalkie_big_nohaplotig	CDS	39945180	39945434	.	-	0	Parent=FBgn0033669.3.mrna1;Target=FBgn0033669.3 1 255 +
Chr2	stalkie_big_nohaplotig	mRNA	39943827	39944968	.	-	.	ID=comp149557_c0_seq1.mrna1;geneID=comp149557_c0_seq1.path1;Name=comp149557_c0_seq1;Dir=sensecoverage=97.9;identity=95.0;matches=1029;mismatches=28;indels=26;unknowns=0;Target=comp149557_c0_seq1 3 164 +;locus=RLOC_00016731
Chr2	stalkie_big_nohaplotig	exon	39943827	39944659	93	-	.	Parent=comp149557_c0_seq1.mrna1;Target=comp149557_c0_seq1 251 1057 +
Chr2	stalkie_big_nohaplotig	exon	39944719	39944968	99	-	.	Parent=comp149557_c0_seq1.mrna1;Target=comp149557_c0_seq1 1 250 +
Chr2	stalkie_big_nohaplotig	CDS	39944805	39944966	.	-	0	Parent=comp149557_c0_seq1.mrna1
Chr2	gffcl	locus	39953124	39960490	.	+	.	ID=RLOC_00016732;geneIDs=FBgn0026573.1.path1;transcripts=FBgn0026573.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39953124	39960490	.	+	.	ID=FBgn0026573.1.mrna1;geneID=FBgn0026573.1.path1;Name=FBgn0026573.1;Dir=sensecoverage=100.0;identity=99.9;matches=3748;mismatches=5;indels=0;unknowns=0;locus=RLOC_00016732
Chr2	stalkie_big_nohaplotig	exon	39953124	39953595	100	+	.	Parent=FBgn0026573.1.mrna1;Target=FBgn0026573.1 1 472 +
Chr2	stalkie_big_nohaplotig	exon	39954012	39954480	100	+	.	Parent=FBgn0026573.1.mrna1;Target=FBgn0026573.1 473 941 +
Chr2	stalkie_big_nohaplotig	exon	39954990	39956248	99	+	.	Parent=FBgn0026573.1.mrna1;Target=FBgn0026573.1 942 2200 +
Chr2	stalkie_big_nohaplotig	exon	39958716	39959693	100	+	.	Parent=FBgn0026573.1.mrna1;Target=FBgn0026573.1 2201 3178 +
Chr2	stalkie_big_nohaplotig	exon	39959772	39960197	100	+	.	Parent=FBgn0026573.1.mrna1;Target=FBgn0026573.1 3179 3604 +
Chr2	stalkie_big_nohaplotig	exon	39960342	39960490	99	+	.	Parent=FBgn0026573.1.mrna1;Target=FBgn0026573.1 3605 3753 +
Chr2	stalkie_big_nohaplotig	CDS	39953124	39953595	.	+	0	Parent=FBgn0026573.1.mrna1;Target=FBgn0026573.1 1 472 +
Chr2	stalkie_big_nohaplotig	CDS	39954012	39954480	.	+	2	Parent=FBgn0026573.1.mrna1;Target=FBgn0026573.1 473 941 +
Chr2	stalkie_big_nohaplotig	CDS	39954990	39956248	.	+	1	Parent=FBgn0026573.1.mrna1;Target=FBgn0026573.1 942 2200 +
Chr2	stalkie_big_nohaplotig	CDS	39958716	39959693	.	+	2	Parent=FBgn0026573.1.mrna1;Target=FBgn0026573.1 2201 3178 +
Chr2	stalkie_big_nohaplotig	CDS	39959772	39960197	.	+	2	Parent=FBgn0026573.1.mrna1;Target=FBgn0026573.1 3179 3604 +
Chr2	stalkie_big_nohaplotig	CDS	39960342	39960490	.	+	2	Parent=FBgn0026573.1.mrna1;Target=FBgn0026573.1 3605 3753 +
Chr2	gffcl	locus	39961787	39963717	.	-	.	ID=RLOC_00016733;geneIDs=comp160821_c0_seq1.path1;transcripts=comp160821_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39961787	39963717	.	-	.	ID=comp160821_c0_seq1.mrna1;geneID=comp160821_c0_seq1.path1;Name=comp160821_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=1910;mismatches=20;indels=8;unknowns=0;Target=comp160821_c0_seq1 1937 1 .;CDS_Target=comp160821_c0_seq1 829 704 .;locus=RLOC_00016733
Chr2	stalkie_big_nohaplotig	exon	39961787	39963717	98	-	.	Parent=comp160821_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39962895	39963020	.	-	0	Parent=comp160821_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39989693	39990172	.	-	.	ID=comp117361_c0_seq1.mrna1;geneID=comp117361_c0_seq1.path1;Name=comp117361_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=476;mismatches=4;indels=3;unknowns=0;Target=comp117361_c0_seq1 483 1 .;CDS_Target=comp117361_c0_seq1 202 116 .;locus=RLOC_00016734
Chr2	stalkie_big_nohaplotig	exon	39989693	39990172	98	-	.	Parent=comp117361_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39989971	39990057	.	-	0	Parent=comp117361_c0_seq1.mrna1
Chr2	gffcl	locus	39987103	39988111	.	-	.	ID=RLOC_00016735;geneIDs=comp158546_c0_seq1.path1;transcripts=comp158546_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39987103	39988111	.	-	.	ID=comp158546_c0_seq1.mrna1;geneID=comp158546_c0_seq1.path1;Name=comp158546_c0_seq1;Dir=indeterminatecoverage=95.2;identity=94.8;matches=959;mismatches=43;indels=10;unknowns=0;Target=comp158546_c0_seq1 1056 52 .;CDS_Target=comp158546_c0_seq1 178 53 .;locus=RLOC_00016735
Chr2	stalkie_big_nohaplotig	exon	39987103	39988111	94	-	.	Parent=comp158546_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39987985	39988110	.	-	0	Parent=comp158546_c0_seq1.mrna1
Chr2	gffcl	locus	39996745	39997740	.	.	.	ID=RLOC_00016736;geneIDs=comp83420_c0_seq1.path1,comp152822_c0_seq1.path1;transcripts=comp152822_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	39996745	39997552	.	+	.	ID=comp152822_c0_seq1.mrna1;geneID=comp152822_c0_seq1.path1;Name=comp152822_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.9;matches=775;mismatches=13;indels=20;unknowns=0;Target=comp152822_c0_seq1 788 1 .;CDS_Target=comp152822_c0_seq1 129 49 .;locus=RLOC_00016736
Chr2	stalkie_big_nohaplotig	exon	39996745	39997552	95	+	.	Parent=comp152822_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	39996793	39996873	.	+	0	Parent=comp152822_c0_seq1.mrna1
Chr2	gffcl	locus	40000504	40003790	.	.	.	ID=RLOC_00016737;geneIDs=FBgn0033381.1.path1,comp157894_c0_seq1.path1;transcripts=FBgn0033381.1.mrna1,comp157894_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40000504	40003790	.	-	.	ID=FBgn0033381.1.mrna1;geneID=FBgn0033381.1.path1;Name=FBgn0033381.1;Dir=sensecoverage=100.0;identity=100.0;matches=723;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016737
Chr2	stalkie_big_nohaplotig	exon	40000504	40000636	100	-	.	Parent=FBgn0033381.1.mrna1;Target=FBgn0033381.1 591 723 +
Chr2	stalkie_big_nohaplotig	exon	40000691	40000884	100	-	.	Parent=FBgn0033381.1.mrna1;Target=FBgn0033381.1 397 590 +
Chr2	stalkie_big_nohaplotig	exon	40003077	40003218	100	-	.	Parent=FBgn0033381.1.mrna1;Target=FBgn0033381.1 255 396 +
Chr2	stalkie_big_nohaplotig	exon	40003408	40003469	100	-	.	Parent=FBgn0033381.1.mrna1;Target=FBgn0033381.1 193 254 +
Chr2	stalkie_big_nohaplotig	exon	40003535	40003583	100	-	.	Parent=FBgn0033381.1.mrna1;Target=FBgn0033381.1 144 192 +
Chr2	stalkie_big_nohaplotig	exon	40003648	40003790	100	-	.	Parent=FBgn0033381.1.mrna1;Target=FBgn0033381.1 1 143 +
Chr2	stalkie_big_nohaplotig	CDS	40000504	40000636	.	-	1	Parent=FBgn0033381.1.mrna1;Target=FBgn0033381.1 591 723 +
Chr2	stalkie_big_nohaplotig	CDS	40000691	40000884	.	-	0	Parent=FBgn0033381.1.mrna1;Target=FBgn0033381.1 397 590 +
Chr2	stalkie_big_nohaplotig	CDS	40003077	40003218	.	-	1	Parent=FBgn0033381.1.mrna1;Target=FBgn0033381.1 255 396 +
Chr2	stalkie_big_nohaplotig	CDS	40003408	40003469	.	-	0	Parent=FBgn0033381.1.mrna1;Target=FBgn0033381.1 193 254 +
Chr2	stalkie_big_nohaplotig	CDS	40003535	40003583	.	-	1	Parent=FBgn0033381.1.mrna1;Target=FBgn0033381.1 144 192 +
Chr2	stalkie_big_nohaplotig	CDS	40003648	40003790	.	-	0	Parent=FBgn0033381.1.mrna1;Target=FBgn0033381.1 1 143 +
Chr2	stalkie_big_nohaplotig	mRNA	40000855	40002221	.	+	.	ID=comp157894_c0_seq1.mrna1;geneID=comp157894_c0_seq1.path1;Name=comp157894_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.3;matches=1314;mismatches=42;indels=38;unknowns=0;Target=comp157894_c0_seq1 1383 1 .;CDS_Target=comp157894_c0_seq1 760 650 .;locus=RLOC_00016737
Chr2	stalkie_big_nohaplotig	exon	40000855	40002221	94	+	.	Parent=comp157894_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	40001494	40001596	.	+	0	Parent=comp157894_c0_seq1.mrna1
Chr2	gffcl	locus	40005565	40008625	.	-	.	ID=RLOC_00016738;geneIDs=FBgn0033381.2.path1;transcripts=FBgn0033381.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40005565	40008625	.	-	.	ID=FBgn0033381.2.mrna1;geneID=FBgn0033381.2.path1;Name=FBgn0033381.2;Dir=sensecoverage=100.0;identity=99.9;matches=746;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016738
Chr2	stalkie_big_nohaplotig	exon	40005565	40005697	100	-	.	Parent=FBgn0033381.2.mrna1;Target=FBgn0033381.2 615 747 +
Chr2	stalkie_big_nohaplotig	exon	40005757	40005950	100	-	.	Parent=FBgn0033381.2.mrna1;Target=FBgn0033381.2 421 614 +
Chr2	stalkie_big_nohaplotig	exon	40006326	40006532	100	-	.	Parent=FBgn0033381.2.mrna1;Target=FBgn0033381.2 214 420 +
Chr2	stalkie_big_nohaplotig	exon	40006607	40006655	100	-	.	Parent=FBgn0033381.2.mrna1;Target=FBgn0033381.2 165 213 +
Chr2	stalkie_big_nohaplotig	exon	40008462	40008625	99	-	.	Parent=FBgn0033381.2.mrna1;Target=FBgn0033381.2 1 164 +
Chr2	stalkie_big_nohaplotig	CDS	40005565	40005697	.	-	1	Parent=FBgn0033381.2.mrna1;Target=FBgn0033381.2 615 747 +
Chr2	stalkie_big_nohaplotig	CDS	40005757	40005950	.	-	0	Parent=FBgn0033381.2.mrna1;Target=FBgn0033381.2 421 614 +
Chr2	stalkie_big_nohaplotig	CDS	40006326	40006532	.	-	0	Parent=FBgn0033381.2.mrna1;Target=FBgn0033381.2 214 420 +
Chr2	stalkie_big_nohaplotig	CDS	40006607	40006655	.	-	1	Parent=FBgn0033381.2.mrna1;Target=FBgn0033381.2 165 213 +
Chr2	stalkie_big_nohaplotig	CDS	40008462	40008625	.	-	0	Parent=FBgn0033381.2.mrna1;Target=FBgn0033381.2 1 164 +
Chr2	gffcl	locus	40013850	40015603	.	+	.	ID=RLOC_00016739;geneIDs=comp161013_c0_seq1.path1;transcripts=comp161013_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40013850	40015603	.	+	.	ID=comp161013_c0_seq1.mrna1;geneID=comp161013_c0_seq1.path1;Name=comp161013_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.0;matches=1735;mismatches=11;indels=139;unknowns=0;Target=comp161013_c0_seq1 1877 1 .;CDS_Target=comp161013_c0_seq1 825 706 .;locus=RLOC_00016739
Chr2	stalkie_big_nohaplotig	exon	40013850	40015603	92	+	.	Parent=comp161013_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	40014433	40014552	.	+	0	Parent=comp161013_c0_seq1.mrna1
Chr2	gffcl	locus	40019503	40020339	.	+	.	ID=RLOC_00016741;geneIDs=comp154654_c0_seq1.path1;transcripts=comp154654_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40019503	40020339	.	+	.	ID=comp154654_c0_seq1.mrna1;geneID=comp154654_c0_seq1.path1;Name=comp154654_c0_seq1;Dir=indeterminatecoverage=96.1;identity=98.4;matches=824;mismatches=13;indels=0;unknowns=0;Target=comp154654_c0_seq1 837 1 .;CDS_Target=comp154654_c0_seq1 109 2 .;locus=RLOC_00016741
Chr2	stalkie_big_nohaplotig	exon	40019503	40020339	98	+	.	Parent=comp154654_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	40019504	40019611	.	+	0	Parent=comp154654_c0_seq1.mrna1
Chr2	gffcl	locus	40037919	40038289	.	+	.	ID=RLOC_00016742;geneIDs=comp137513_c3_seq1.path1;transcripts=comp137513_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40037919	40038289	.	+	.	ID=comp137513_c3_seq1.mrna1;geneID=comp137513_c3_seq1.path1;Name=comp137513_c3_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=371;mismatches=0;indels=0;unknowns=0;Target=comp137513_c3_seq1 371 1 .;CDS_Target=comp137513_c3_seq1 62 3 .;locus=RLOC_00016742
Chr2	stalkie_big_nohaplotig	exon	40037919	40038289	100	+	.	Parent=comp137513_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	40037921	40037980	.	+	0	Parent=comp137513_c3_seq1.mrna1
Chr2	gffcl	locus	40038931	40041081	.	-	.	ID=RLOC_00016743;geneIDs=FBgn0033380.1.path1;transcripts=FBgn0033380.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40038931	40041081	.	-	.	ID=FBgn0033380.1.mrna1;geneID=FBgn0033380.1.path1;Name=FBgn0033380.1;Dir=sensecoverage=100.0;identity=99.5;matches=1400;mismatches=1;indels=6;unknowns=0;locus=RLOC_00016743
Chr2	stalkie_big_nohaplotig	exon	40038931	40039100	96	-	.	Parent=FBgn0033380.1.mrna1;Target=FBgn0033380.1 1232 1407 +
Chr2	stalkie_big_nohaplotig	exon	40039161	40039422	100	-	.	Parent=FBgn0033380.1.mrna1;Target=FBgn0033380.1 970 1231 +
Chr2	stalkie_big_nohaplotig	exon	40039485	40039576	100	-	.	Parent=FBgn0033380.1.mrna1;Target=FBgn0033380.1 878 969 +
Chr2	stalkie_big_nohaplotig	exon	40040046	40040643	100	-	.	Parent=FBgn0033380.1.mrna1;Target=FBgn0033380.1 280 877 +
Chr2	stalkie_big_nohaplotig	exon	40040696	40040812	100	-	.	Parent=FBgn0033380.1.mrna1;Target=FBgn0033380.1 163 279 +
Chr2	stalkie_big_nohaplotig	exon	40040864	40040980	100	-	.	Parent=FBgn0033380.1.mrna1;Target=FBgn0033380.1 46 162 +
Chr2	stalkie_big_nohaplotig	exon	40041037	40041081	100	-	.	Parent=FBgn0033380.1.mrna1;Target=FBgn0033380.1 1 45 +
Chr2	stalkie_big_nohaplotig	CDS	40038931	40039100	.	-	2	Parent=FBgn0033380.1.mrna1;Target=FBgn0033380.1 1232 1407 +
Chr2	stalkie_big_nohaplotig	CDS	40039161	40039422	.	-	0	Parent=FBgn0033380.1.mrna1;Target=FBgn0033380.1 970 1231 +
Chr2	stalkie_big_nohaplotig	CDS	40039485	40039576	.	-	2	Parent=FBgn0033380.1.mrna1;Target=FBgn0033380.1 878 969 +
Chr2	stalkie_big_nohaplotig	CDS	40040046	40040643	.	-	0	Parent=FBgn0033380.1.mrna1;Target=FBgn0033380.1 280 877 +
Chr2	stalkie_big_nohaplotig	CDS	40040696	40040812	.	-	0	Parent=FBgn0033380.1.mrna1;Target=FBgn0033380.1 163 279 +
Chr2	stalkie_big_nohaplotig	CDS	40040864	40040980	.	-	0	Parent=FBgn0033380.1.mrna1;Target=FBgn0033380.1 46 162 +
Chr2	stalkie_big_nohaplotig	CDS	40041037	40041081	.	-	0	Parent=FBgn0033380.1.mrna1;Target=FBgn0033380.1 1 45 +
Chr2	gffcl	locus	40045562	40046773	.	+	.	ID=RLOC_00016745;geneIDs=comp155082_c0_seq1.path1;transcripts=comp155082_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40045562	40046773	.	+	.	ID=comp155082_c0_seq1.mrna1;geneID=comp155082_c0_seq1.path1;Name=comp155082_c0_seq1;Dir=indeterminatecoverage=99.3;identity=100.0;matches=1212;mismatches=0;indels=0;unknowns=0;Target=comp155082_c0_seq1 1221 10 .;CDS_Target=comp155082_c0_seq1 601 446 .;locus=RLOC_00016745
Chr2	stalkie_big_nohaplotig	exon	40045562	40046773	100	+	.	Parent=comp155082_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	40045998	40046153	.	+	0	Parent=comp155082_c0_seq1.mrna1
Chr2	gffcl	locus	40049936	40050766	.	-	.	ID=RLOC_00016746;geneIDs=FBgn0033377.1.path1;transcripts=FBgn0033377.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40049936	40050766	.	-	.	ID=FBgn0033377.1.mrna1;geneID=FBgn0033377.1.path1;Name=FBgn0033377.1;Dir=indeterminatecoverage=42.8;identity=100.0;matches=831;mismatches=0;indels=0;unknowns=0;Target=FBgn0033377.1 1941 1111 .;locus=RLOC_00016746
Chr2	stalkie_big_nohaplotig	exon	40049936	40050766	100	-	.	Parent=FBgn0033377.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	40049936	40050766	.	-	0	Parent=FBgn0033377.1.mrna1
Chr2	gffcl	locus	40055929	40057587	.	-	.	ID=RLOC_00016747;geneIDs=ORF556.path1;transcripts=ORF556.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40055929	40057587	.	-	.	ID=ORF556.mrna1;geneID=ORF556.path1;Name=ORF556;Dir=indeterminatecoverage=100.0;identity=98.4;matches=1633;mismatches=25;indels=2;unknowns=0;Target=ORF556 1659 1 .;CDS_Target=ORF556 1659 148 .;locus=RLOC_00016747
Chr2	stalkie_big_nohaplotig	exon	40055929	40057587	98	-	.	Parent=ORF556.mrna1
Chr2	stalkie_big_nohaplotig	CDS	40055929	40057439	.	-	0	Parent=ORF556.mrna1
Chr2	gffcl	locus	40063960	40064707	.	-	.	ID=RLOC_00016748;geneIDs=ORF3271.path1;transcripts=ORF3271.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40063960	40064707	.	-	.	ID=ORF3271.mrna1;geneID=ORF3271.path1;Name=ORF3271;Dir=indeterminatecoverage=99.7;identity=99.2;matches=742;mismatches=6;indels=0;unknowns=0;Target=ORF3271 750 3 .;CDS_Target=ORF3271 750 4 .;locus=RLOC_00016748
Chr2	stalkie_big_nohaplotig	exon	40063960	40064707	99	-	.	Parent=ORF3271.mrna1
Chr2	stalkie_big_nohaplotig	CDS	40063960	40064706	.	-	0	Parent=ORF3271.mrna1
Chr2	gffcl	locus	40073757	40075188	.	-	.	ID=RLOC_00016749;geneIDs=FBgn0033669.1.path1;transcripts=FBgn0033669.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40073757	40075188	.	-	.	ID=FBgn0033669.1.mrna1;geneID=FBgn0033669.1.path1;Name=FBgn0033669.1;Dir=sensecoverage=100.0;identity=100.0;matches=867;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016749
Chr2	stalkie_big_nohaplotig	exon	40073757	40074048	100	-	.	Parent=FBgn0033669.1.mrna1;Target=FBgn0033669.1 576 867 +
Chr2	stalkie_big_nohaplotig	exon	40074156	40074247	100	-	.	Parent=FBgn0033669.1.mrna1;Target=FBgn0033669.1 484 575 +
Chr2	stalkie_big_nohaplotig	exon	40074306	40074599	100	-	.	Parent=FBgn0033669.1.mrna1;Target=FBgn0033669.1 190 483 +
Chr2	stalkie_big_nohaplotig	exon	40074662	40074718	100	-	.	Parent=FBgn0033669.1.mrna1;Target=FBgn0033669.1 133 189 +
Chr2	stalkie_big_nohaplotig	exon	40075057	40075188	100	-	.	Parent=FBgn0033669.1.mrna1;Target=FBgn0033669.1 1 132 +
Chr2	stalkie_big_nohaplotig	CDS	40073757	40074048	.	-	1	Parent=FBgn0033669.1.mrna1;Target=FBgn0033669.1 576 867 +
Chr2	stalkie_big_nohaplotig	CDS	40074156	40074247	.	-	0	Parent=FBgn0033669.1.mrna1;Target=FBgn0033669.1 484 575 +
Chr2	stalkie_big_nohaplotig	CDS	40074306	40074599	.	-	0	Parent=FBgn0033669.1.mrna1;Target=FBgn0033669.1 190 483 +
Chr2	stalkie_big_nohaplotig	CDS	40074662	40074718	.	-	0	Parent=FBgn0033669.1.mrna1;Target=FBgn0033669.1 133 189 +
Chr2	stalkie_big_nohaplotig	CDS	40075057	40075188	.	-	0	Parent=FBgn0033669.1.mrna1;Target=FBgn0033669.1 1 132 +
Chr2	gffcl	locus	40085663	40087363	.	-	.	ID=RLOC_00016750;geneIDs=comp151236_c0_seq1.path1;transcripts=comp151236_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40085663	40087363	.	-	.	ID=comp151236_c0_seq1.mrna1;geneID=comp151236_c0_seq1.path1;Name=comp151236_c0_seq1;Dir=indeterminatecoverage=98.6;identity=98.7;matches=1041;mismatches=7;indels=7;unknowns=0;Target=comp151236_c0_seq1 337 230 .;locus=RLOC_00016750
Chr2	stalkie_big_nohaplotig	exon	40085663	40086332	99	-	.	Parent=comp151236_c0_seq1.mrna1;Target=comp151236_c0_seq1 1060 391 .
Chr2	stalkie_big_nohaplotig	exon	40086981	40087363	96	-	.	Parent=comp151236_c0_seq1.mrna1;Target=comp151236_c0_seq1 390 11 .
Chr2	stalkie_big_nohaplotig	CDS	40087035	40087144	.	-	0	Parent=comp151236_c0_seq1.mrna1
Chr2	gffcl	locus	40085720	40087103	.	+	.	ID=RLOC_00016751;geneIDs=ORF3118.path1;transcripts=ORF3118.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40085720	40087103	.	+	.	ID=ORF3118.mrna1;geneID=ORF3118.path1;Name=ORF3118;Dir=indeterminatecoverage=96.1;identity=98.9;matches=730;mismatches=3;indels=5;unknowns=0;locus=RLOC_00016751
Chr2	stalkie_big_nohaplotig	exon	40085720	40086332	99	+	.	Parent=ORF3118.mrna1;Target=ORF3118 613 1 .
Chr2	stalkie_big_nohaplotig	exon	40086981	40087103	94	+	.	Parent=ORF3118.mrna1;Target=ORF3118 735 614 .
Chr2	stalkie_big_nohaplotig	CDS	40085720	40086332	.	+	0	Parent=ORF3118.mrna1;Target=ORF3118 613 1 .
Chr2	stalkie_big_nohaplotig	CDS	40086981	40087103	.	+	2	Parent=ORF3118.mrna1;Target=ORF3118 735 614 .
Chr2	gffcl	locus	40092997	40099131	.	+	.	ID=RLOC_00016752;geneIDs=comp148574_c1_seq1.path1;transcripts=comp148574_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40092997	40099131	.	+	.	ID=comp148574_c1_seq1.mrna1;geneID=comp148574_c1_seq1.path1;Name=comp148574_c1_seq1;Dir=sensecoverage=97.2;identity=99.3;matches=407;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016752
Chr2	stalkie_big_nohaplotig	exon	40092997	40093382	99	+	.	Parent=comp148574_c1_seq1.mrna1;Target=comp148574_c1_seq1 13 398 +
Chr2	stalkie_big_nohaplotig	exon	40099108	40099131	100	+	.	Parent=comp148574_c1_seq1.mrna1;Target=comp148574_c1_seq1 399 422 +
Chr2	stalkie_big_nohaplotig	CDS	40093170	40093382	.	+	0	Parent=comp148574_c1_seq1.mrna1;Target=comp148574_c1_seq1 186 398 +
Chr2	stalkie_big_nohaplotig	CDS	40099108	40099131	.	+	0	Parent=comp148574_c1_seq1.mrna1;Target=comp148574_c1_seq1 399 422 +
Chr2	gffcl	locus	40099196	40100298	.	+	.	ID=RLOC_00016753;geneIDs=FBgn0259219.1.path1,comp135168_c0_seq1.path1;transcripts=FBgn0259219.1.mrna1,comp135168_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40099196	40100298	.	+	.	ID=FBgn0259219.1.mrna1;geneID=FBgn0259219.1.path1;Name=FBgn0259219.1;Dir=sensecoverage=100.0;identity=99.2;matches=494;mismatches=2;indels=2;unknowns=0;locus=RLOC_00016753
Chr2	stalkie_big_nohaplotig	exon	40099196	40099259	98	+	.	Parent=FBgn0259219.1.mrna1;Target=FBgn0259219.1 1 65 +
Chr2	stalkie_big_nohaplotig	exon	40099365	40099456	100	+	.	Parent=FBgn0259219.1.mrna1;Target=FBgn0259219.1 66 157 +
Chr2	stalkie_big_nohaplotig	exon	40099644	40099816	100	+	.	Parent=FBgn0259219.1.mrna1;Target=FBgn0259219.1 158 330 +
Chr2	stalkie_big_nohaplotig	exon	40100132	40100298	98	+	.	Parent=FBgn0259219.1.mrna1;Target=FBgn0259219.1 331 498 +
Chr2	stalkie_big_nohaplotig	CDS	40099198	40099259	.	+	0	Parent=FBgn0259219.1.mrna1;Target=FBgn0259219.1 3 65 +
Chr2	stalkie_big_nohaplotig	CDS	40099365	40099373	.	+	1	Parent=FBgn0259219.1.mrna1;Target=FBgn0259219.1 66 74 +
Chr2	stalkie_big_nohaplotig	mRNA	40099793	40100150	.	+	.	ID=comp135168_c0_seq1.mrna1;geneID=comp135168_c0_seq1.path1;Name=comp135168_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=356;mismatches=2;indels=1;unknowns=0;Target=comp135168_c0_seq1 359 1 .;CDS_Target=comp135168_c0_seq1 84 1 .;locus=RLOC_00016753
Chr2	stalkie_big_nohaplotig	exon	40099793	40100150	99	+	.	Parent=comp135168_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	40099793	40099876	.	+	0	Parent=comp135168_c0_seq1.mrna1
Chr2	gffcl	locus	40108067	40141676	.	-	.	ID=RLOC_00016754;geneIDs=FBgn0052843.1.path1;transcripts=FBgn0052843.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40108067	40141676	.	-	.	ID=FBgn0052843.1.mrna1;geneID=FBgn0052843.1.path1;Name=FBgn0052843.1;Dir=sensecoverage=100.0;identity=99.8;matches=1410;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016754
Chr2	stalkie_big_nohaplotig	exon	40108067	40108108	100	-	.	Parent=FBgn0052843.1.mrna1;Target=FBgn0052843.1 1372 1413 +
Chr2	stalkie_big_nohaplotig	exon	40110553	40110681	100	-	.	Parent=FBgn0052843.1.mrna1;Target=FBgn0052843.1 1243 1371 +
Chr2	stalkie_big_nohaplotig	exon	40123770	40123893	99	-	.	Parent=FBgn0052843.1.mrna1;Target=FBgn0052843.1 1119 1242 +
Chr2	stalkie_big_nohaplotig	exon	40124281	40124457	100	-	.	Parent=FBgn0052843.1.mrna1;Target=FBgn0052843.1 942 1118 +
Chr2	stalkie_big_nohaplotig	exon	40124796	40125022	100	-	.	Parent=FBgn0052843.1.mrna1;Target=FBgn0052843.1 715 941 +
Chr2	stalkie_big_nohaplotig	exon	40125391	40125517	100	-	.	Parent=FBgn0052843.1.mrna1;Target=FBgn0052843.1 588 714 +
Chr2	stalkie_big_nohaplotig	exon	40133769	40133860	97	-	.	Parent=FBgn0052843.1.mrna1;Target=FBgn0052843.1 496 587 +
Chr2	stalkie_big_nohaplotig	exon	40133968	40134074	100	-	.	Parent=FBgn0052843.1.mrna1;Target=FBgn0052843.1 389 495 +
Chr2	stalkie_big_nohaplotig	exon	40141001	40141111	100	-	.	Parent=FBgn0052843.1.mrna1;Target=FBgn0052843.1 278 388 +
Chr2	stalkie_big_nohaplotig	exon	40141400	40141676	100	-	.	Parent=FBgn0052843.1.mrna1;Target=FBgn0052843.1 1 277 +
Chr2	stalkie_big_nohaplotig	CDS	40108067	40108108	.	-	0	Parent=FBgn0052843.1.mrna1;Target=FBgn0052843.1 1372 1413 +
Chr2	stalkie_big_nohaplotig	CDS	40110553	40110681	.	-	0	Parent=FBgn0052843.1.mrna1;Target=FBgn0052843.1 1243 1371 +
Chr2	stalkie_big_nohaplotig	CDS	40123770	40123893	.	-	1	Parent=FBgn0052843.1.mrna1;Target=FBgn0052843.1 1119 1242 +
Chr2	stalkie_big_nohaplotig	CDS	40124281	40124457	.	-	1	Parent=FBgn0052843.1.mrna1;Target=FBgn0052843.1 942 1118 +
Chr2	stalkie_big_nohaplotig	CDS	40124796	40125022	.	-	0	Parent=FBgn0052843.1.mrna1;Target=FBgn0052843.1 715 941 +
Chr2	stalkie_big_nohaplotig	CDS	40125391	40125517	.	-	1	Parent=FBgn0052843.1.mrna1;Target=FBgn0052843.1 588 714 +
Chr2	stalkie_big_nohaplotig	CDS	40133769	40133860	.	-	0	Parent=FBgn0052843.1.mrna1;Target=FBgn0052843.1 496 587 +
Chr2	stalkie_big_nohaplotig	CDS	40133968	40134074	.	-	2	Parent=FBgn0052843.1.mrna1;Target=FBgn0052843.1 389 495 +
Chr2	stalkie_big_nohaplotig	CDS	40141001	40141111	.	-	2	Parent=FBgn0052843.1.mrna1;Target=FBgn0052843.1 278 388 +
Chr2	stalkie_big_nohaplotig	CDS	40141400	40141676	.	-	0	Parent=FBgn0052843.1.mrna1;Target=FBgn0052843.1 1 277 +
Chr2	gffcl	locus	40230314	40231554	.	-	.	ID=RLOC_00016755;geneIDs=FBgn0033826.1.path1;transcripts=FBgn0033826.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40230314	40231554	.	-	.	ID=FBgn0033826.1.mrna1;geneID=FBgn0033826.1.path1;Name=FBgn0033826.1;Dir=sensecoverage=100.0;identity=100.0;matches=1071;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016755
Chr2	stalkie_big_nohaplotig	exon	40230314	40230405	100	-	.	Parent=FBgn0033826.1.mrna1;Target=FBgn0033826.1 980 1071 +
Chr2	stalkie_big_nohaplotig	exon	40230522	40230718	100	-	.	Parent=FBgn0033826.1.mrna1;Target=FBgn0033826.1 783 979 +
Chr2	stalkie_big_nohaplotig	exon	40230773	40231554	100	-	.	Parent=FBgn0033826.1.mrna1;Target=FBgn0033826.1 1 782 +
Chr2	stalkie_big_nohaplotig	CDS	40230314	40230405	.	-	2	Parent=FBgn0033826.1.mrna1;Target=FBgn0033826.1 980 1071 +
Chr2	stalkie_big_nohaplotig	CDS	40230522	40230718	.	-	1	Parent=FBgn0033826.1.mrna1;Target=FBgn0033826.1 783 979 +
Chr2	stalkie_big_nohaplotig	CDS	40230773	40231554	.	-	0	Parent=FBgn0033826.1.mrna1;Target=FBgn0033826.1 1 782 +
Chr2	gffcl	locus	40236020	40239408	.	+	.	ID=RLOC_00016756;geneIDs=FBgn0033827.1.path1;transcripts=FBgn0033827.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40236020	40239408	.	+	.	ID=FBgn0033827.1.mrna1;geneID=FBgn0033827.1.path1;Name=FBgn0033827.1;Dir=sensecoverage=100.0;identity=99.4;matches=1226;mismatches=4;indels=3;unknowns=0;locus=RLOC_00016756
Chr2	stalkie_big_nohaplotig	exon	40236020	40236350	97	+	.	Parent=FBgn0033827.1.mrna1;Target=FBgn0033827.1 1 334 +
Chr2	stalkie_big_nohaplotig	exon	40238131	40238740	100	+	.	Parent=FBgn0033827.1.mrna1;Target=FBgn0033827.1 335 944 +
Chr2	stalkie_big_nohaplotig	exon	40238799	40239001	100	+	.	Parent=FBgn0033827.1.mrna1;Target=FBgn0033827.1 945 1147 +
Chr2	stalkie_big_nohaplotig	exon	40239323	40239408	100	+	.	Parent=FBgn0033827.1.mrna1;Target=FBgn0033827.1 1148 1233 +
Chr2	stalkie_big_nohaplotig	CDS	40236020	40236350	.	+	0	Parent=FBgn0033827.1.mrna1;Target=FBgn0033827.1 1 334 +
Chr2	stalkie_big_nohaplotig	CDS	40238131	40238740	.	+	2	Parent=FBgn0033827.1.mrna1;Target=FBgn0033827.1 335 944 +
Chr2	stalkie_big_nohaplotig	CDS	40238799	40239001	.	+	1	Parent=FBgn0033827.1.mrna1;Target=FBgn0033827.1 945 1147 +
Chr2	stalkie_big_nohaplotig	CDS	40239323	40239408	.	+	2	Parent=FBgn0033827.1.mrna1;Target=FBgn0033827.1 1148 1233 +
Chr2	gffcl	locus	40248681	40290033	.	+	.	ID=RLOC_00016757;geneIDs=comp146583_c0_seq1.path1;transcripts=comp146583_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40248681	40290033	.	+	.	ID=comp146583_c0_seq1.mrna1;geneID=comp146583_c0_seq1.path1;Name=comp146583_c0_seq1;Dir=indeterminatecoverage=84.2;identity=91.0;matches=1033;mismatches=31;indels=71;unknowns=0;Target=comp146583_c0_seq1 528 424 .;locus=RLOC_00016757
Chr2	stalkie_big_nohaplotig	exon	40248681	40249742	90	+	.	Parent=comp146583_c0_seq1.mrna1;Target=comp146583_c0_seq1 992 1 .
Chr2	stalkie_big_nohaplotig	exon	40257300	40257314	86	+	.	Parent=comp146583_c0_seq1.mrna1;Target=comp146583_c0_seq1 1105 1091 .
Chr2	stalkie_big_nohaplotig	exon	40257444	40257454	100	+	.	Parent=comp146583_c0_seq1.mrna1;Target=comp146583_c0_seq1 1116 1106 .
Chr2	stalkie_big_nohaplotig	exon	40263035	40263039	100	+	.	Parent=comp146583_c0_seq1.mrna1;Target=comp146583_c0_seq1 1121 1117 .
Chr2	stalkie_big_nohaplotig	exon	40267560	40267563	100	+	.	Parent=comp146583_c0_seq1.mrna1;Target=comp146583_c0_seq1 1125 1122 .
Chr2	stalkie_big_nohaplotig	exon	40272693	40272701	100	+	.	Parent=comp146583_c0_seq1.mrna1;Target=comp146583_c0_seq1 1134 1126 .
Chr2	stalkie_big_nohaplotig	exon	40288484	40288496	92	+	.	Parent=comp146583_c0_seq1.mrna1;Target=comp146583_c0_seq1 1146 1135 .
Chr2	stalkie_big_nohaplotig	exon	40288765	40288769	100	+	.	Parent=comp146583_c0_seq1.mrna1;Target=comp146583_c0_seq1 1151 1147 .
Chr2	stalkie_big_nohaplotig	exon	40290024	40290033	100	+	.	Parent=comp146583_c0_seq1.mrna1;Target=comp146583_c0_seq1 1161 1152 .
Chr2	stalkie_big_nohaplotig	CDS	40249174	40249278	.	+	0	Parent=comp146583_c0_seq1.mrna1
Chr2	gffcl	locus	40250103	40250954	.	+	.	ID=RLOC_00016758;geneIDs=ORF2484.path1;transcripts=ORF2484.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40250103	40250954	.	+	.	ID=ORF2484.mrna1;geneID=ORF2484.path1;Name=ORF2484;Dir=indeterminatecoverage=100.0;identity=98.2;matches=842;mismatches=5;indels=10;unknowns=0;Target=ORF2484 852 1 .;locus=RLOC_00016758
Chr2	stalkie_big_nohaplotig	exon	40250103	40250954	98	+	.	Parent=ORF2484.mrna1
Chr2	stalkie_big_nohaplotig	CDS	40250103	40250954	.	+	0	Parent=ORF2484.mrna1
Chr2	gffcl	locus	40260950	40263541	.	-	.	ID=RLOC_00016759;geneIDs=comp162173_c1_seq1.path1;transcripts=comp162173_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40260950	40263541	.	-	.	ID=comp162173_c1_seq1.mrna1;geneID=comp162173_c1_seq1.path1;Name=comp162173_c1_seq1;Dir=sensecoverage=75.6;identity=92.2;matches=1854;mismatches=138;indels=19;unknowns=0;locus=RLOC_00016759
Chr2	stalkie_big_nohaplotig	exon	40260950	40261619	83	-	.	Parent=comp162173_c1_seq1.mrna1;Target=comp162173_c1_seq1 1398 2086 +
Chr2	stalkie_big_nohaplotig	exon	40261788	40261834	61	-	.	Parent=comp162173_c1_seq1.mrna1;Target=comp162173_c1_seq1 1286 1332 +
Chr2	stalkie_big_nohaplotig	exon	40262267	40263541	97	-	.	Parent=comp162173_c1_seq1.mrna1;Target=comp162173_c1_seq1 11 1285 +
Chr2	stalkie_big_nohaplotig	CDS	40261525	40261619	.	-	1	Parent=comp162173_c1_seq1.mrna1;Target=comp162173_c1_seq1 1398 1492 +
Chr2	stalkie_big_nohaplotig	CDS	40261788	40261834	.	-	0	Parent=comp162173_c1_seq1.mrna1;Target=comp162173_c1_seq1 1286 1332 +
Chr2	stalkie_big_nohaplotig	CDS	40262267	40263463	.	-	0	Parent=comp162173_c1_seq1.mrna1;Target=comp162173_c1_seq1 89 1285 +
Chr2	gffcl	locus	40267809	40274555	.	+	.	ID=RLOC_00016760;geneIDs=comp159369_c0_seq1.path1;transcripts=comp159369_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40267809	40274555	.	+	.	ID=comp159369_c0_seq1.mrna1;geneID=comp159369_c0_seq1.path1;Name=comp159369_c0_seq1;Dir=sensecoverage=100.0;identity=98.3;matches=596;mismatches=10;indels=0;unknowns=0;Target=comp159369_c0_seq1 3 95 +;locus=RLOC_00016760
Chr2	stalkie_big_nohaplotig	exon	40267809	40267962	100	+	.	Parent=comp159369_c0_seq1.mrna1;Target=comp159369_c0_seq1 1 154 +
Chr2	stalkie_big_nohaplotig	exon	40268036	40268143	97	+	.	Parent=comp159369_c0_seq1.mrna1;Target=comp159369_c0_seq1 155 262 +
Chr2	stalkie_big_nohaplotig	exon	40274139	40274161	100	+	.	Parent=comp159369_c0_seq1.mrna1;Target=comp159369_c0_seq1 263 285 +
Chr2	stalkie_big_nohaplotig	exon	40274235	40274555	97	+	.	Parent=comp159369_c0_seq1.mrna1;Target=comp159369_c0_seq1 286 606 +
Chr2	stalkie_big_nohaplotig	CDS	40267811	40267903	.	+	0	Parent=comp159369_c0_seq1.mrna1
Chr2	gffcl	locus	40342292	40342884	.	+	.	ID=RLOC_00016761;geneIDs=comp130695_c0_seq1.path1;transcripts=comp130695_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40342292	40342884	.	+	.	ID=comp130695_c0_seq1.mrna1;geneID=comp130695_c0_seq1.path1;Name=comp130695_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=534;mismatches=0;indels=0;unknowns=0;Target=comp130695_c0_seq1 381 503 .;locus=RLOC_00016761
Chr2	stalkie_big_nohaplotig	exon	40342292	40342799	100	+	.	Parent=comp130695_c0_seq1.mrna1;Target=comp130695_c0_seq1 27 534 -
Chr2	stalkie_big_nohaplotig	exon	40342859	40342884	100	+	.	Parent=comp130695_c0_seq1.mrna1;Target=comp130695_c0_seq1 1 26 -
Chr2	stalkie_big_nohaplotig	CDS	40342323	40342445	.	+	0	Parent=comp130695_c0_seq1.mrna1
Chr2	gffcl	locus	40344676	40346484	.	+	.	ID=RLOC_00016762;geneIDs=comp155792_c0_seq1.path1;transcripts=comp155792_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40344676	40346484	.	+	.	ID=comp155792_c0_seq1.mrna1;geneID=comp155792_c0_seq1.path1;Name=comp155792_c0_seq1;Dir=sensecoverage=99.9;identity=97.5;matches=914;mismatches=3;indels=20;unknowns=0;locus=RLOC_00016762
Chr2	stalkie_big_nohaplotig	exon	40344676	40345079	94	+	.	Parent=comp155792_c0_seq1.mrna1;Target=comp155792_c0_seq1 1 414 +
Chr2	stalkie_big_nohaplotig	exon	40345913	40346193	100	+	.	Parent=comp155792_c0_seq1.mrna1;Target=comp155792_c0_seq1 415 695 +
Chr2	stalkie_big_nohaplotig	exon	40346248	40346484	100	+	.	Parent=comp155792_c0_seq1.mrna1;Target=comp155792_c0_seq1 696 932 +
Chr2	stalkie_big_nohaplotig	CDS	40346026	40346193	.	+	0	Parent=comp155792_c0_seq1.mrna1;Target=comp155792_c0_seq1 528 695 +
Chr2	stalkie_big_nohaplotig	CDS	40346248	40346319	.	+	0	Parent=comp155792_c0_seq1.mrna1;Target=comp155792_c0_seq1 696 767 +
Chr2	gffcl	locus	40556103	40556867	.	-	.	ID=RLOC_00016763;geneIDs=FBgn0033830.path1;transcripts=FBgn0033830.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40556103	40556867	.	-	.	ID=FBgn0033830.mrna1;geneID=FBgn0033830.path1;Name=FBgn0033830;Dir=sensecoverage=100.0;identity=99.7;matches=601;mismatches=1;indels=1;unknowns=0;Target=FBgn0033830 3 41 +;locus=RLOC_00016763
Chr2	stalkie_big_nohaplotig	exon	40556103	40556412	100	-	.	Parent=FBgn0033830.mrna1;Target=FBgn0033830 294 603 +
Chr2	stalkie_big_nohaplotig	exon	40556576	40556867	99	-	.	Parent=FBgn0033830.mrna1;Target=FBgn0033830 1 293 +
Chr2	stalkie_big_nohaplotig	CDS	40556828	40556865	.	-	0	Parent=FBgn0033830.mrna1
Chr2	gffcl	locus	40557076	40557384	.	+	.	ID=RLOC_00016764;geneIDs=comp137720_c0_seq1.path1;transcripts=comp137720_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40557076	40557384	.	+	.	ID=comp137720_c0_seq1.mrna1;geneID=comp137720_c0_seq1.path1;Name=comp137720_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=305;mismatches=4;indels=2;unknowns=0;Target=comp137720_c0_seq1 311 1 .;CDS_Target=comp137720_c0_seq1 270 136 .;locus=RLOC_00016764
Chr2	stalkie_big_nohaplotig	exon	40557076	40557384	98	+	.	Parent=comp137720_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	40557209	40557343	.	+	0	Parent=comp137720_c0_seq1.mrna1
Chr2	gffcl	locus	40561108	40571859	.	-	.	ID=RLOC_00016765;geneIDs=comp146863_c0_seq1.path1;transcripts=comp146863_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40561108	40571859	.	-	.	ID=comp146863_c0_seq1.mrna1;geneID=comp146863_c0_seq1.path1;Name=comp146863_c0_seq1;Dir=sensecoverage=100.0;identity=99.0;matches=813;mismatches=5;indels=3;unknowns=0;locus=RLOC_00016765
Chr2	stalkie_big_nohaplotig	exon	40561108	40561373	99	-	.	Parent=comp146863_c0_seq1.mrna1;Target=comp146863_c0_seq1 556 821 +
Chr2	stalkie_big_nohaplotig	exon	40561431	40561861	99	-	.	Parent=comp146863_c0_seq1.mrna1;Target=comp146863_c0_seq1 122 555 +
Chr2	stalkie_big_nohaplotig	exon	40571739	40571859	96	-	.	Parent=comp146863_c0_seq1.mrna1;Target=comp146863_c0_seq1 1 121 +
Chr2	stalkie_big_nohaplotig	CDS	40561314	40561373	.	-	0	Parent=comp146863_c0_seq1.mrna1;Target=comp146863_c0_seq1 556 615 +
Chr2	stalkie_big_nohaplotig	CDS	40561431	40561604	.	-	0	Parent=comp146863_c0_seq1.mrna1;Target=comp146863_c0_seq1 382 555 +
Chr2	gffcl	locus	40572800	42495789	.	-	.	ID=RLOC_00016766;geneIDs=ORF776.path1,comp151136_c2_seq1.path1;transcripts=comp151136_c2_seq1.mrna1,ORF776.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40572800	42495789	.	-	.	ID=comp151136_c2_seq1.mrna1;geneID=comp151136_c2_seq1.path1;Name=comp151136_c2_seq1;Dir=antisensecoverage=97.5;identity=99.4;matches=2003;mismatches=12;indels=0;unknowns=0;locus=RLOC_00016766
Chr2	stalkie_big_nohaplotig	exon	40572800	40573289	98	-	.	Parent=comp151136_c2_seq1.mrna1;Target=comp151136_c2_seq1 18 507 -
Chr2	stalkie_big_nohaplotig	exon	40573393	40573489	98	-	.	Parent=comp151136_c2_seq1.mrna1;Target=comp151136_c2_seq1 508 604 -
Chr2	stalkie_big_nohaplotig	exon	40575271	40575375	100	-	.	Parent=comp151136_c2_seq1.mrna1;Target=comp151136_c2_seq1 605 709 -
Chr2	stalkie_big_nohaplotig	exon	40575986	40577292	99	-	.	Parent=comp151136_c2_seq1.mrna1;Target=comp151136_c2_seq1 710 2016 -
Chr2	stalkie_big_nohaplotig	exon	42470282	42470283	100	-	.	Parent=comp151136_c2_seq1.mrna1;Target=comp151136_c2_seq1 2017 2018 -
Chr2	stalkie_big_nohaplotig	exon	42477754	42477755	100	-	.	Parent=comp151136_c2_seq1.mrna1;Target=comp151136_c2_seq1 2019 2020 -
Chr2	stalkie_big_nohaplotig	exon	42481396	42481400	100	-	.	Parent=comp151136_c2_seq1.mrna1;Target=comp151136_c2_seq1 2021 2025 -
Chr2	stalkie_big_nohaplotig	exon	42488553	42488555	100	-	.	Parent=comp151136_c2_seq1.mrna1;Target=comp151136_c2_seq1 2026 2028 -
Chr2	stalkie_big_nohaplotig	exon	42495786	42495789	100	-	.	Parent=comp151136_c2_seq1.mrna1;Target=comp151136_c2_seq1 2029 2032 -
Chr2	stalkie_big_nohaplotig	CDS	40572898	40573289	.	-	2	Parent=comp151136_c2_seq1.mrna1;Target=comp151136_c2_seq1 116 507 .
Chr2	stalkie_big_nohaplotig	CDS	40573393	40573489	.	-	0	Parent=comp151136_c2_seq1.mrna1;Target=comp151136_c2_seq1 508 604 .
Chr2	stalkie_big_nohaplotig	CDS	40575271	40575375	.	-	0	Parent=comp151136_c2_seq1.mrna1;Target=comp151136_c2_seq1 605 709 .
Chr2	stalkie_big_nohaplotig	CDS	40575986	40577152	.	-	0	Parent=comp151136_c2_seq1.mrna1;Target=comp151136_c2_seq1 710 1876 .
Chr2	stalkie_big_nohaplotig	mRNA	40573176	40577206	.	-	.	ID=ORF776.mrna1;geneID=ORF776.path1;Name=ORF776;Dir=sensecoverage=100.0;identity=99.7;matches=1436;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016766
Chr2	stalkie_big_nohaplotig	exon	40573176	40573289	99	-	.	Parent=ORF776.mrna1;Target=ORF776 1327 1440 +
Chr2	stalkie_big_nohaplotig	exon	40575271	40575375	100	-	.	Parent=ORF776.mrna1;Target=ORF776 1222 1326 +
Chr2	stalkie_big_nohaplotig	exon	40575986	40577206	99	-	.	Parent=ORF776.mrna1;Target=ORF776 1 1221 +
Chr2	stalkie_big_nohaplotig	CDS	40573176	40573289	.	-	0	Parent=ORF776.mrna1;Target=ORF776 1327 1440 +
Chr2	stalkie_big_nohaplotig	CDS	40575271	40575375	.	-	0	Parent=ORF776.mrna1;Target=ORF776 1222 1326 +
Chr2	stalkie_big_nohaplotig	CDS	40575986	40577206	.	-	0	Parent=ORF776.mrna1;Target=ORF776 1 1221 +
Chr2	gffcl	locus	40608275	40612752	.	-	.	ID=RLOC_00016767;geneIDs=FBgn0033834.1.path1,comp159636_c0_seq1.path1;transcripts=FBgn0033834.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40608334	40612752	.	-	.	ID=FBgn0033834.1.mrna1;geneID=FBgn0033834.1.path1;Name=FBgn0033834.1;Dir=sensecoverage=100.0;identity=100.0;matches=3533;mismatches=0;indels=0;unknowns=1;locus=RLOC_00016767
Chr2	stalkie_big_nohaplotig	exon	40608334	40608894	100	-	.	Parent=FBgn0033834.1.mrna1;Target=FBgn0033834.1 2974 3534 +
Chr2	stalkie_big_nohaplotig	exon	40608994	40609168	100	-	.	Parent=FBgn0033834.1.mrna1;Target=FBgn0033834.1 2799 2973 +
Chr2	stalkie_big_nohaplotig	exon	40609880	40611896	100	-	.	Parent=FBgn0033834.1.mrna1;Target=FBgn0033834.1 782 2798 +
Chr2	stalkie_big_nohaplotig	exon	40611972	40612752	100	-	.	Parent=FBgn0033834.1.mrna1;Target=FBgn0033834.1 1 781 +
Chr2	stalkie_big_nohaplotig	CDS	40608334	40608894	.	-	0	Parent=FBgn0033834.1.mrna1;Target=FBgn0033834.1 2974 3534 +
Chr2	stalkie_big_nohaplotig	CDS	40608994	40609168	.	-	1	Parent=FBgn0033834.1.mrna1;Target=FBgn0033834.1 2799 2973 +
Chr2	stalkie_big_nohaplotig	CDS	40609880	40611896	.	-	2	Parent=FBgn0033834.1.mrna1;Target=FBgn0033834.1 782 2798 +
Chr2	stalkie_big_nohaplotig	CDS	40611972	40612752	.	-	0	Parent=FBgn0033834.1.mrna1;Target=FBgn0033834.1 1 781 +
Chr2	gffcl	locus	40628119	40628829	.	-	.	ID=RLOC_00016768;geneIDs=comp7708_c0_seq1.path1;transcripts=comp7708_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40628119	40628829	.	-	.	ID=comp7708_c0_seq1.mrna1;geneID=comp7708_c0_seq1.path1;Name=comp7708_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=710;mismatches=1;indels=0;unknowns=0;Target=comp7708_c0_seq1 711 1 .;CDS_Target=comp7708_c0_seq1 307 152 .;locus=RLOC_00016768
Chr2	stalkie_big_nohaplotig	exon	40628119	40628829	99	-	.	Parent=comp7708_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	40628523	40628678	.	-	0	Parent=comp7708_c0_seq1.mrna1
Chr2	gffcl	locus	40632298	40633606	.	-	.	ID=RLOC_00016769;geneIDs=comp151794_c1_seq1.path1;transcripts=comp151794_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40632298	40633606	.	-	.	ID=comp151794_c1_seq1.mrna1;geneID=comp151794_c1_seq1.path1;Name=comp151794_c1_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1308;mismatches=1;indels=0;unknowns=0;Target=comp151794_c1_seq1 1309 1 .;CDS_Target=comp151794_c1_seq1 647 486 .;locus=RLOC_00016769
Chr2	stalkie_big_nohaplotig	exon	40632298	40633606	99	-	.	Parent=comp151794_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	40632960	40633121	.	-	0	Parent=comp151794_c1_seq1.mrna1
Chr2	gffcl	locus	40636619	40637080	.	+	.	ID=RLOC_00016770;geneIDs=FBgn0033355.1.path1;transcripts=FBgn0033355.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40636619	40637080	.	+	.	ID=FBgn0033355.1.mrna1;geneID=FBgn0033355.1.path1;Name=FBgn0033355.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=462;mismatches=0;indels=0;unknowns=0;Target=FBgn0033355.1 462 1 .;locus=RLOC_00016770
Chr2	stalkie_big_nohaplotig	exon	40636619	40637080	100	+	.	Parent=FBgn0033355.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	40636619	40637080	.	+	0	Parent=FBgn0033355.1.mrna1
Chr2	gffcl	locus	40652364	40656764	.	-	.	ID=RLOC_00016771;geneIDs=FBgn0027607.1.path1;transcripts=FBgn0027607.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40652364	40656764	.	-	.	ID=FBgn0027607.1.mrna1;geneID=FBgn0027607.1.path1;Name=FBgn0027607.1;Dir=sensecoverage=100.0;identity=100.0;matches=2091;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016771
Chr2	stalkie_big_nohaplotig	exon	40652364	40652510	100	-	.	Parent=FBgn0027607.1.mrna1;Target=FBgn0027607.1 1945 2091 +
Chr2	stalkie_big_nohaplotig	exon	40652580	40652702	100	-	.	Parent=FBgn0027607.1.mrna1;Target=FBgn0027607.1 1822 1944 +
Chr2	stalkie_big_nohaplotig	exon	40654630	40655127	100	-	.	Parent=FBgn0027607.1.mrna1;Target=FBgn0027607.1 1324 1821 +
Chr2	stalkie_big_nohaplotig	exon	40655185	40655815	100	-	.	Parent=FBgn0027607.1.mrna1;Target=FBgn0027607.1 693 1323 +
Chr2	stalkie_big_nohaplotig	exon	40655876	40655980	100	-	.	Parent=FBgn0027607.1.mrna1;Target=FBgn0027607.1 588 692 +
Chr2	stalkie_big_nohaplotig	exon	40656040	40656333	100	-	.	Parent=FBgn0027607.1.mrna1;Target=FBgn0027607.1 294 587 +
Chr2	stalkie_big_nohaplotig	exon	40656405	40656551	100	-	.	Parent=FBgn0027607.1.mrna1;Target=FBgn0027607.1 147 293 +
Chr2	stalkie_big_nohaplotig	exon	40656619	40656764	100	-	.	Parent=FBgn0027607.1.mrna1;Target=FBgn0027607.1 1 146 +
Chr2	stalkie_big_nohaplotig	CDS	40652364	40652510	.	-	0	Parent=FBgn0027607.1.mrna1;Target=FBgn0027607.1 1945 2091 +
Chr2	stalkie_big_nohaplotig	CDS	40652580	40652702	.	-	0	Parent=FBgn0027607.1.mrna1;Target=FBgn0027607.1 1822 1944 +
Chr2	stalkie_big_nohaplotig	CDS	40654630	40655127	.	-	0	Parent=FBgn0027607.1.mrna1;Target=FBgn0027607.1 1324 1821 +
Chr2	stalkie_big_nohaplotig	CDS	40655185	40655815	.	-	1	Parent=FBgn0027607.1.mrna1;Target=FBgn0027607.1 693 1323 +
Chr2	stalkie_big_nohaplotig	CDS	40655876	40655980	.	-	1	Parent=FBgn0027607.1.mrna1;Target=FBgn0027607.1 588 692 +
Chr2	stalkie_big_nohaplotig	CDS	40656040	40656333	.	-	1	Parent=FBgn0027607.1.mrna1;Target=FBgn0027607.1 294 587 +
Chr2	stalkie_big_nohaplotig	CDS	40656405	40656551	.	-	1	Parent=FBgn0027607.1.mrna1;Target=FBgn0027607.1 147 293 +
Chr2	stalkie_big_nohaplotig	CDS	40656619	40656764	.	-	0	Parent=FBgn0027607.1.mrna1;Target=FBgn0027607.1 1 146 +
Chr2	gffcl	locus	40660514	40661383	.	-	.	ID=RLOC_00016772;geneIDs=comp113717_c0_seq1.path1;transcripts=comp113717_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40660514	40661383	.	-	.	ID=comp113717_c0_seq1.mrna1;geneID=comp113717_c0_seq1.path1;Name=comp113717_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=868;mismatches=2;indels=0;unknowns=0;Target=comp113717_c0_seq1 870 1 .;CDS_Target=comp113717_c0_seq1 250 2 .;locus=RLOC_00016772
Chr2	stalkie_big_nohaplotig	exon	40660514	40661383	99	-	.	Parent=comp113717_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	40661134	40661382	.	-	0	Parent=comp113717_c0_seq1.mrna1
Chr2	gffcl	locus	40674382	40675374	.	+	.	ID=RLOC_00016773;geneIDs=comp135319_c0_seq1.path1,comp151112_c0_seq1.path1;transcripts=comp135319_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40674382	40675056	.	+	.	ID=comp135319_c0_seq1.mrna1;geneID=comp135319_c0_seq1.path1;Name=comp135319_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=607;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016773
Chr2	stalkie_big_nohaplotig	exon	40674382	40674754	99	+	.	Parent=comp135319_c0_seq1.mrna1;Target=comp135319_c0_seq1 1 373 +
Chr2	stalkie_big_nohaplotig	exon	40674822	40675056	100	+	.	Parent=comp135319_c0_seq1.mrna1;Target=comp135319_c0_seq1 374 608 +
Chr2	stalkie_big_nohaplotig	CDS	40674655	40674754	.	+	0	Parent=comp135319_c0_seq1.mrna1;Target=comp135319_c0_seq1 274 373 +
Chr2	stalkie_big_nohaplotig	CDS	40674822	40674886	.	+	2	Parent=comp135319_c0_seq1.mrna1;Target=comp135319_c0_seq1 374 438 +
Chr2	stalkie_big_nohaplotig	mRNA	40724212	40724642	.	-	.	ID=comp135606_c0_seq1.mrna2;geneID=comp135606_c0_seq1.path2;Name=comp135606_c0_seq1;Dir=antisensecoverage=94.7;identity=98.1;matches=366;mismatches=5;indels=2;unknowns=0;locus=RLOC_00016774
Chr2	stalkie_big_nohaplotig	exon	40724212	40724329	97	-	.	Parent=comp135606_c0_seq1.mrna2;Target=comp135606_c0_seq1 22 140 -
Chr2	stalkie_big_nohaplotig	exon	40724389	40724642	98	-	.	Parent=comp135606_c0_seq1.mrna2;Target=comp135606_c0_seq1 141 393 -
Chr2	stalkie_big_nohaplotig	CDS	40724265	40724329	.	-	2	Parent=comp135606_c0_seq1.mrna2;Target=comp135606_c0_seq1 76 140 .
Chr2	stalkie_big_nohaplotig	CDS	40724389	40724488	.	-	0	Parent=comp135606_c0_seq1.mrna2;Target=comp135606_c0_seq1 141 240 .
Chr2	gffcl	locus	40677070	42618774	.	-	.	ID=RLOC_00016775;geneIDs=comp135047_c0_seq1.path1;transcripts=comp135047_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40677070	42618774	.	-	.	ID=comp135047_c0_seq1.mrna1;geneID=comp135047_c0_seq1.path1;Name=comp135047_c0_seq1;Dir=indeterminatecoverage=88.6;identity=98.6;matches=687;mismatches=3;indels=7;unknowns=0;Target=comp135047_c0_seq1 314 222 .;locus=RLOC_00016775
Chr2	stalkie_big_nohaplotig	exon	40677070	40677075	100	-	.	Parent=comp135047_c0_seq1.mrna1;Target=comp135047_c0_seq1 703 698 .
Chr2	stalkie_big_nohaplotig	exon	40678065	40678067	100	-	.	Parent=comp135047_c0_seq1.mrna1;Target=comp135047_c0_seq1 697 695 .
Chr2	stalkie_big_nohaplotig	exon	40679094	40679101	100	-	.	Parent=comp135047_c0_seq1.mrna1;Target=comp135047_c0_seq1 694 687 .
Chr2	stalkie_big_nohaplotig	exon	40686528	40686533	100	-	.	Parent=comp135047_c0_seq1.mrna1;Target=comp135047_c0_seq1 686 681 .
Chr2	stalkie_big_nohaplotig	exon	40688118	40688133	100	-	.	Parent=comp135047_c0_seq1.mrna1;Target=comp135047_c0_seq1 680 665 .
Chr2	stalkie_big_nohaplotig	exon	40689253	40689258	100	-	.	Parent=comp135047_c0_seq1.mrna1;Target=comp135047_c0_seq1 664 659 .
Chr2	stalkie_big_nohaplotig	exon	40690788	40690794	100	-	.	Parent=comp135047_c0_seq1.mrna1;Target=comp135047_c0_seq1 658 652 .
Chr2	stalkie_big_nohaplotig	exon	40691701	40691706	100	-	.	Parent=comp135047_c0_seq1.mrna1;Target=comp135047_c0_seq1 651 646 .
Chr2	stalkie_big_nohaplotig	exon	40693694	40693709	75	-	.	Parent=comp135047_c0_seq1.mrna1;Target=comp135047_c0_seq1 645 634 .
Chr2	stalkie_big_nohaplotig	exon	40709386	40709387	100	-	.	Parent=comp135047_c0_seq1.mrna1;Target=comp135047_c0_seq1 633 632 .
Chr2	stalkie_big_nohaplotig	exon	42618157	42618774	99	-	.	Parent=comp135047_c0_seq1.mrna1;Target=comp135047_c0_seq1 631 11 .
Chr2	stalkie_big_nohaplotig	CDS	42618472	42618563	.	-	0	Parent=comp135047_c0_seq1.mrna1
Chr2	gffcl	locus	40686644	40687075	.	+	.	ID=RLOC_00016776;geneIDs=comp135606_c0_seq1.path1;transcripts=comp135606_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40686644	40687075	.	+	.	ID=comp135606_c0_seq1.mrna1;geneID=comp135606_c0_seq1.path1;Name=comp135606_c0_seq1;Dir=antisensecoverage=94.9;identity=98.1;matches=367;mismatches=5;indels=2;unknowns=0;locus=RLOC_00016776
Chr2	stalkie_big_nohaplotig	exon	40686644	40686897	98	+	.	Parent=comp135606_c0_seq1.mrna1;Target=comp135606_c0_seq1 141 393 -
Chr2	stalkie_big_nohaplotig	exon	40686957	40687075	97	+	.	Parent=comp135606_c0_seq1.mrna1;Target=comp135606_c0_seq1 21 140 -
Chr2	stalkie_big_nohaplotig	CDS	40686798	40686897	.	+	0	Parent=comp135606_c0_seq1.mrna1;Target=comp135606_c0_seq1 141 240 .
Chr2	stalkie_big_nohaplotig	CDS	40686957	40687021	.	+	2	Parent=comp135606_c0_seq1.mrna1;Target=comp135606_c0_seq1 76 140 .
Chr2	gffcl	locus	40804256	40804640	.	-	.	ID=RLOC_00016779;geneIDs=comp108830_c0_seq1.path1;transcripts=comp108830_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40804256	40804640	.	-	.	ID=comp108830_c0_seq1.mrna1;geneID=comp108830_c0_seq1.path1;Name=comp108830_c0_seq1;Dir=indeterminatecoverage=94.4;identity=99.5;matches=384;mismatches=1;indels=1;unknowns=0;Target=comp108830_c0_seq1 409 24 .;CDS_Target=comp108830_c0_seq1 225 25 .;locus=RLOC_00016779
Chr2	stalkie_big_nohaplotig	exon	40804256	40804640	99	-	.	Parent=comp108830_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	40804440	40804639	.	-	0	Parent=comp108830_c0_seq1.mrna1
Chr2	gffcl	locus	40860327	41467671	.	+	.	ID=RLOC_00016780;geneIDs=FBgn0259211.1.path1;transcripts=FBgn0259211.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40860327	41467671	.	+	.	ID=FBgn0259211.1.mrna1;geneID=FBgn0259211.1.path1;Name=FBgn0259211.1;Dir=sensecoverage=64.3;identity=95.9;matches=1326;mismatches=43;indels=14;unknowns=0;locus=RLOC_00016780
Chr2	stalkie_big_nohaplotig	exon	40860327	40860451	100	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 152 276 +
Chr2	stalkie_big_nohaplotig	exon	40861486	40861914	100	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 277 705 +
Chr2	stalkie_big_nohaplotig	exon	40862418	40862650	99	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 706 938 +
Chr2	stalkie_big_nohaplotig	exon	40863577	40863739	100	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 939 1101 +
Chr2	stalkie_big_nohaplotig	exon	40870511	40870622	100	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1102 1213 +
Chr2	stalkie_big_nohaplotig	exon	40872254	40872348	100	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1214 1308 +
Chr2	stalkie_big_nohaplotig	exon	41283497	41283502	100	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1391 1396 +
Chr2	stalkie_big_nohaplotig	exon	41290436	41290444	100	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1397 1405 +
Chr2	stalkie_big_nohaplotig	exon	41306531	41306541	100	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1427 1437 +
Chr2	stalkie_big_nohaplotig	exon	41312838	41312843	100	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1438 1443 +
Chr2	stalkie_big_nohaplotig	exon	41332651	41332714	44	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1444 1504 +
Chr2	stalkie_big_nohaplotig	exon	41345118	41345126	100	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1505 1513 +
Chr2	stalkie_big_nohaplotig	exon	41346102	41346113	91	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1514 1525 +
Chr2	stalkie_big_nohaplotig	exon	41350155	41350201	60	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1526 1565 +
Chr2	stalkie_big_nohaplotig	exon	41365561	41365567	100	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1566 1572 +
Chr2	stalkie_big_nohaplotig	exon	41371269	41371274	100	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1573 1578 +
Chr2	stalkie_big_nohaplotig	exon	41378555	41378564	100	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1579 1588 +
Chr2	stalkie_big_nohaplotig	exon	41378734	41378737	100	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1657 1660 +
Chr2	stalkie_big_nohaplotig	exon	41379348	41379351	100	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1661 1664 +
Chr2	stalkie_big_nohaplotig	exon	41396407	41396416	100	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1665 1674 +
Chr2	stalkie_big_nohaplotig	exon	41407958	41407959	100	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1675 1676 +
Chr2	stalkie_big_nohaplotig	exon	41464510	41464516	100	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1677 1683 +
Chr2	stalkie_big_nohaplotig	exon	41467665	41467671	100	+	.	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1684 1690 +
Chr2	stalkie_big_nohaplotig	CDS	40860329	40860451	.	+	0	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 154 276 +
Chr2	stalkie_big_nohaplotig	CDS	40861486	40861914	.	+	0	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 277 705 +
Chr2	stalkie_big_nohaplotig	CDS	40862418	40862650	.	+	0	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 706 938 +
Chr2	stalkie_big_nohaplotig	CDS	40863577	40863739	.	+	1	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 939 1101 +
Chr2	stalkie_big_nohaplotig	CDS	40870511	40870622	.	+	0	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1102 1213 +
Chr2	stalkie_big_nohaplotig	CDS	40872254	40872348	.	+	2	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1214 1308 +
Chr2	stalkie_big_nohaplotig	CDS	41283497	41283502	.	+	0	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1391 1396 +
Chr2	stalkie_big_nohaplotig	CDS	41290436	41290444	.	+	0	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1397 1405 +
Chr2	stalkie_big_nohaplotig	CDS	41306531	41306541	.	+	0	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1427 1437 +
Chr2	stalkie_big_nohaplotig	CDS	41312838	41312843	.	+	1	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1438 1443 +
Chr2	stalkie_big_nohaplotig	CDS	41332651	41332714	.	+	1	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1444 1504 +
Chr2	stalkie_big_nohaplotig	CDS	41345118	41345126	.	+	0	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1505 1513 +
Chr2	stalkie_big_nohaplotig	CDS	41346102	41346113	.	+	0	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1514 1525 +
Chr2	stalkie_big_nohaplotig	CDS	41350155	41350201	.	+	0	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1526 1565 +
Chr2	stalkie_big_nohaplotig	CDS	41365561	41365567	.	+	1	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1566 1572 +
Chr2	stalkie_big_nohaplotig	CDS	41371269	41371274	.	+	0	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1573 1578 +
Chr2	stalkie_big_nohaplotig	CDS	41378555	41378564	.	+	0	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1579 1588 +
Chr2	stalkie_big_nohaplotig	CDS	41378734	41378737	.	+	2	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1657 1660 +
Chr2	stalkie_big_nohaplotig	CDS	41379348	41379351	.	+	1	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1661 1664 +
Chr2	stalkie_big_nohaplotig	CDS	41396407	41396416	.	+	0	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1665 1674 +
Chr2	stalkie_big_nohaplotig	CDS	41407958	41407959	.	+	2	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1675 1676 +
Chr2	stalkie_big_nohaplotig	CDS	41464510	41464516	.	+	0	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1677 1683 +
Chr2	stalkie_big_nohaplotig	CDS	41467665	41467670	.	+	2	Parent=FBgn0259211.1.mrna1;Target=FBgn0259211.1 1684 1689 +
Chr2	gffcl	locus	40880457	40880936	.	-	.	ID=RLOC_00016781;geneIDs=comp143118_c0_seq1.path1;transcripts=comp143118_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40880457	40880936	.	-	.	ID=comp143118_c0_seq1.mrna1;geneID=comp143118_c0_seq1.path1;Name=comp143118_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=477;mismatches=2;indels=1;unknowns=0;Target=comp143118_c0_seq1 479 1 .;CDS_Target=comp143118_c0_seq1 474 403 .;locus=RLOC_00016781
Chr2	stalkie_big_nohaplotig	exon	40880457	40880936	99	-	.	Parent=comp143118_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	40880462	40880533	.	-	0	Parent=comp143118_c0_seq1.mrna1
Chr2	gffcl	locus	40882231	40883545	.	.	.	ID=RLOC_00016782;geneIDs=comp154677_c0_seq1.path1,comp156451_c0_seq1.path1;transcripts=comp156451_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40882231	40883066	.	-	.	ID=comp156451_c0_seq1.mrna1;geneID=comp156451_c0_seq1.path1;Name=comp156451_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=656;mismatches=3;indels=0;unknowns=0;Target=comp156451_c0_seq1 526 401 .;locus=RLOC_00016782
Chr2	stalkie_big_nohaplotig	exon	40882231	40882603	99	-	.	Parent=comp156451_c0_seq1.mrna1;Target=comp156451_c0_seq1 659 287 .
Chr2	stalkie_big_nohaplotig	exon	40882781	40883066	99	-	.	Parent=comp156451_c0_seq1.mrna1;Target=comp156451_c0_seq1 286 1 .
Chr2	stalkie_big_nohaplotig	CDS	40882364	40882489	.	-	0	Parent=comp156451_c0_seq1.mrna1
Chr2	gffcl	locus	40887689	41000058	.	-	.	ID=RLOC_00016783;geneIDs=FBgn0028743.1.path1,comp108594_c0_seq1.path1,comp142911_c0_seq1.path1;transcripts=FBgn0028743.1.mrna1,comp142911_c0_seq1.mrna1,comp108594_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40887689	40988724	.	-	.	ID=FBgn0028743.1.mrna1;geneID=FBgn0028743.1.path1;Name=FBgn0028743.1;Dir=sensecoverage=99.9;identity=98.7;matches=751;mismatches=1;indels=9;unknowns=0;locus=RLOC_00016783
Chr2	stalkie_big_nohaplotig	exon	40887689	40887773	100	-	.	Parent=FBgn0028743.1.mrna1;Target=FBgn0028743.1 669 753 +
Chr2	stalkie_big_nohaplotig	exon	40889058	40889346	100	-	.	Parent=FBgn0028743.1.mrna1;Target=FBgn0028743.1 380 668 +
Chr2	stalkie_big_nohaplotig	exon	40890652	40890713	100	-	.	Parent=FBgn0028743.1.mrna1;Target=FBgn0028743.1 318 379 +
Chr2	stalkie_big_nohaplotig	exon	40890776	40890850	100	-	.	Parent=FBgn0028743.1.mrna1;Target=FBgn0028743.1 243 317 +
Chr2	stalkie_big_nohaplotig	exon	40955025	40955026	100	-	.	Parent=FBgn0028743.1.mrna1;Target=FBgn0028743.1 241 242 +
Chr2	stalkie_big_nohaplotig	exon	40957805	40957820	43	-	.	Parent=FBgn0028743.1.mrna1;Target=FBgn0028743.1 234 240 +
Chr2	stalkie_big_nohaplotig	exon	40986153	40986161	100	-	.	Parent=FBgn0028743.1.mrna1;Target=FBgn0028743.1 225 233 +
Chr2	stalkie_big_nohaplotig	exon	40988383	40988391	100	-	.	Parent=FBgn0028743.1.mrna1;Target=FBgn0028743.1 216 224 +
Chr2	stalkie_big_nohaplotig	exon	40988511	40988724	99	-	.	Parent=FBgn0028743.1.mrna1;Target=FBgn0028743.1 2 215 +
Chr2	stalkie_big_nohaplotig	CDS	40887689	40887773	.	-	1	Parent=FBgn0028743.1.mrna1;Target=FBgn0028743.1 669 753 +
Chr2	stalkie_big_nohaplotig	CDS	40889058	40889346	.	-	2	Parent=FBgn0028743.1.mrna1;Target=FBgn0028743.1 380 668 +
Chr2	stalkie_big_nohaplotig	CDS	40890652	40890713	.	-	1	Parent=FBgn0028743.1.mrna1;Target=FBgn0028743.1 318 379 +
Chr2	stalkie_big_nohaplotig	CDS	40890776	40890850	.	-	1	Parent=FBgn0028743.1.mrna1;Target=FBgn0028743.1 243 317 +
Chr2	stalkie_big_nohaplotig	CDS	40955025	40955026	.	-	0	Parent=FBgn0028743.1.mrna1;Target=FBgn0028743.1 241 242 +
Chr2	stalkie_big_nohaplotig	CDS	40957805	40957820	.	-	1	Parent=FBgn0028743.1.mrna1;Target=FBgn0028743.1 234 240 +
Chr2	stalkie_big_nohaplotig	CDS	40986153	40986161	.	-	1	Parent=FBgn0028743.1.mrna1;Target=FBgn0028743.1 225 233 +
Chr2	stalkie_big_nohaplotig	CDS	40988383	40988391	.	-	1	Parent=FBgn0028743.1.mrna1;Target=FBgn0028743.1 216 224 +
Chr2	stalkie_big_nohaplotig	CDS	40988511	40988722	.	-	0	Parent=FBgn0028743.1.mrna1;Target=FBgn0028743.1 4 215 +
Chr2	stalkie_big_nohaplotig	mRNA	40988703	40998622	.	-	.	ID=comp142911_c0_seq1.mrna1;geneID=comp142911_c0_seq1.path1;Name=comp142911_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=672;mismatches=0;indels=1;unknowns=0;Target=comp142911_c0_seq1 548 670 +;locus=RLOC_00016783
Chr2	stalkie_big_nohaplotig	exon	40988703	40988828	100	-	.	Parent=comp142911_c0_seq1.mrna1;Target=comp142911_c0_seq1 547 672 +
Chr2	stalkie_big_nohaplotig	exon	40988913	40989146	100	-	.	Parent=comp142911_c0_seq1.mrna1;Target=comp142911_c0_seq1 313 546 +
Chr2	stalkie_big_nohaplotig	exon	40998310	40998622	99	-	.	Parent=comp142911_c0_seq1.mrna1;Target=comp142911_c0_seq1 1 312 +
Chr2	stalkie_big_nohaplotig	CDS	40988705	40988827	.	-	0	Parent=comp142911_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40998616	41000058	.	-	.	ID=comp108594_c0_seq1.mrna1;geneID=comp108594_c0_seq1.path1;Name=comp108594_c0_seq1;Dir=sensecoverage=97.3;identity=98.2;matches=327;mismatches=1;indels=5;unknowns=0;Target=comp108594_c0_seq1 1 96 +;locus=RLOC_00016783
Chr2	stalkie_big_nohaplotig	exon	40998616	40998832	97	-	.	Parent=comp108594_c0_seq1.mrna1;Target=comp108594_c0_seq1 116 329 +
Chr2	stalkie_big_nohaplotig	exon	40999944	41000058	100	-	.	Parent=comp108594_c0_seq1.mrna1;Target=comp108594_c0_seq1 1 115 +
Chr2	stalkie_big_nohaplotig	CDS	40999963	41000058	.	-	0	Parent=comp108594_c0_seq1.mrna1
Chr2	gffcl	locus	40910406	40910935	.	-	.	ID=RLOC_00016784;geneIDs=comp819461_c0_seq1.path1;transcripts=comp819461_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	40910406	40910935	.	-	.	ID=comp819461_c0_seq1.mrna1;geneID=comp819461_c0_seq1.path1;Name=comp819461_c0_seq1;Dir=indeterminatecoverage=98.5;identity=100.0;matches=530;mismatches=0;indels=0;unknowns=0;Target=comp819461_c0_seq1 538 9 .;CDS_Target=comp819461_c0_seq1 538 452 .;locus=RLOC_00016784
Chr2	stalkie_big_nohaplotig	exon	40910406	40910935	100	-	.	Parent=comp819461_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	40910406	40910492	.	-	0	Parent=comp819461_c0_seq1.mrna1
Chr2	gffcl	locus	40929061	40930522	.	+	.	ID=RLOC_00016785;geneIDs=ORF749.path8;transcripts=ORF749.mrna8
Chr2	stalkie_big_nohaplotig	mRNA	40929061	40930522	.	+	.	ID=ORF749.mrna8;geneID=ORF749.path8;Name=ORF749;Dir=indeterminatecoverage=99.8;identity=99.5;matches=1454;mismatches=7;indels=1;unknowns=0;Target=ORF749 1464 4 .;CDS_Target=ORF749 28 5 .;locus=RLOC_00016785
Chr2	stalkie_big_nohaplotig	exon	40929061	40930522	99	+	.	Parent=ORF749.mrna8
Chr2	stalkie_big_nohaplotig	CDS	40929062	40929086	.	+	0	Parent=ORF749.mrna8
Chr2	gffcl	locus	41004348	41007197	.	-	.	ID=RLOC_00016786;geneIDs=FBgn0028744.1.path1;transcripts=FBgn0028744.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41004348	41007197	.	-	.	ID=FBgn0028744.1.mrna1;geneID=FBgn0028744.1.path1;Name=FBgn0028744.1;Dir=sensecoverage=100.0;identity=98.3;matches=2583;mismatches=27;indels=18;unknowns=0;locus=RLOC_00016786
Chr2	stalkie_big_nohaplotig	exon	41004348	41004498	100	-	.	Parent=FBgn0028744.1.mrna1;Target=FBgn0028744.1 2478 2628 +
Chr2	stalkie_big_nohaplotig	exon	41004561	41004856	99	-	.	Parent=FBgn0028744.1.mrna1;Target=FBgn0028744.1 2182 2477 +
Chr2	stalkie_big_nohaplotig	exon	41004919	41005406	99	-	.	Parent=FBgn0028744.1.mrna1;Target=FBgn0028744.1 1694 2181 +
Chr2	stalkie_big_nohaplotig	exon	41005463	41006984	97	-	.	Parent=FBgn0028744.1.mrna1;Target=FBgn0028744.1 154 1693 +
Chr2	stalkie_big_nohaplotig	exon	41007045	41007197	98	-	.	Parent=FBgn0028744.1.mrna1;Target=FBgn0028744.1 1 153 +
Chr2	stalkie_big_nohaplotig	CDS	41004348	41004498	.	-	1	Parent=FBgn0028744.1.mrna1;Target=FBgn0028744.1 2478 2628 +
Chr2	stalkie_big_nohaplotig	CDS	41004561	41004856	.	-	0	Parent=FBgn0028744.1.mrna1;Target=FBgn0028744.1 2182 2477 +
Chr2	stalkie_big_nohaplotig	CDS	41004919	41005406	.	-	2	Parent=FBgn0028744.1.mrna1;Target=FBgn0028744.1 1694 2181 +
Chr2	stalkie_big_nohaplotig	CDS	41005463	41006984	.	-	0	Parent=FBgn0028744.1.mrna1;Target=FBgn0028744.1 154 1693 +
Chr2	stalkie_big_nohaplotig	CDS	41007045	41007197	.	-	0	Parent=FBgn0028744.1.mrna1;Target=FBgn0028744.1 1 153 +
Chr2	gffcl	locus	41012319	41015584	.	-	.	ID=RLOC_00016787;geneIDs=FBgn0034267.1.path1;transcripts=FBgn0034267.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41012319	41015584	.	-	.	ID=FBgn0034267.1.mrna1;geneID=FBgn0034267.1.path1;Name=FBgn0034267.1;Dir=sensecoverage=99.9;identity=98.4;matches=820;mismatches=13;indels=0;unknowns=0;locus=RLOC_00016787
Chr2	stalkie_big_nohaplotig	exon	41012319	41012937	98	-	.	Parent=FBgn0034267.1.mrna1;Target=FBgn0034267.1 215 833 +
Chr2	stalkie_big_nohaplotig	exon	41015371	41015584	98	-	.	Parent=FBgn0034267.1.mrna1;Target=FBgn0034267.1 1 214 +
Chr2	stalkie_big_nohaplotig	CDS	41012321	41012937	.	-	2	Parent=FBgn0034267.1.mrna1;Target=FBgn0034267.1 215 831 +
Chr2	stalkie_big_nohaplotig	CDS	41015371	41015584	.	-	0	Parent=FBgn0034267.1.mrna1;Target=FBgn0034267.1 1 214 +
Chr2	gffcl	locus	41014576	41014664	.	+	.	ID=RLOC_00016788;geneIDs=comp145580_c5_seq1.path1;transcripts=comp145580_c5_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41014576	41014664	.	+	.	ID=comp145580_c5_seq1.mrna1;geneID=comp145580_c5_seq1.path1;Name=comp145580_c5_seq1;Dir=indeterminatecoverage=14.2;identity=88.8;matches=79;mismatches=10;indels=0;unknowns=0;Target=comp145580_c5_seq1 89 1 .;locus=RLOC_00016788
Chr2	stalkie_big_nohaplotig	exon	41014576	41014664	88	+	.	Parent=comp145580_c5_seq1.mrna1
Chr2	gffcl	locus	41032182	41033614	.	-	.	ID=RLOC_00016789;geneIDs=FBgn0034266.1.path1;transcripts=FBgn0034266.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41032182	41033614	.	-	.	ID=FBgn0034266.1.mrna1;geneID=FBgn0034266.1.path1;Name=FBgn0034266.1;Dir=sensecoverage=100.0;identity=98.3;matches=1268;mismatches=22;indels=0;unknowns=0;locus=RLOC_00016789
Chr2	stalkie_big_nohaplotig	exon	41032182	41032339	100	-	.	Parent=FBgn0034266.1.mrna1;Target=FBgn0034266.1 1133 1290 +
Chr2	stalkie_big_nohaplotig	exon	41032411	41033498	97	-	.	Parent=FBgn0034266.1.mrna1;Target=FBgn0034266.1 45 1132 +
Chr2	stalkie_big_nohaplotig	exon	41033571	41033614	100	-	.	Parent=FBgn0034266.1.mrna1;Target=FBgn0034266.1 1 44 +
Chr2	stalkie_big_nohaplotig	CDS	41032182	41032339	.	-	2	Parent=FBgn0034266.1.mrna1;Target=FBgn0034266.1 1133 1290 +
Chr2	stalkie_big_nohaplotig	CDS	41032411	41033498	.	-	1	Parent=FBgn0034266.1.mrna1;Target=FBgn0034266.1 45 1132 +
Chr2	stalkie_big_nohaplotig	CDS	41033571	41033614	.	-	0	Parent=FBgn0034266.1.mrna1;Target=FBgn0034266.1 1 44 +
Chr2	gffcl	locus	41033967	41035867	.	+	.	ID=RLOC_00016790;geneIDs=FBgn0034748.1.path1;transcripts=FBgn0034748.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41033967	41035867	.	+	.	ID=FBgn0034748.1.mrna1;geneID=FBgn0034748.1.path1;Name=FBgn0034748.1;Dir=sensecoverage=99.1;identity=98.5;matches=1812;mismatches=28;indels=0;unknowns=0;locus=RLOC_00016790
Chr2	stalkie_big_nohaplotig	exon	41033967	41034121	98	+	.	Parent=FBgn0034748.1.mrna1;Target=FBgn0034748.1 18 172 +
Chr2	stalkie_big_nohaplotig	exon	41034183	41035867	98	+	.	Parent=FBgn0034748.1.mrna1;Target=FBgn0034748.1 173 1857 +
Chr2	stalkie_big_nohaplotig	CDS	41033968	41034121	.	+	0	Parent=FBgn0034748.1.mrna1;Target=FBgn0034748.1 19 172 +
Chr2	stalkie_big_nohaplotig	CDS	41034183	41035867	.	+	2	Parent=FBgn0034748.1.mrna1;Target=FBgn0034748.1 173 1857 +
Chr2	gffcl	locus	41037321	42973524	.	+	.	ID=RLOC_00016791;geneIDs=comp162773_c0_seq1.path1;transcripts=comp162773_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41037321	42973524	.	+	.	ID=comp162773_c0_seq1.mrna1;geneID=comp162773_c0_seq1.path1;Name=comp162773_c0_seq1;Dir=indeterminatecoverage=97.7;identity=95.6;matches=1922;mismatches=61;indels=27;unknowns=0;Target=comp162773_c0_seq1 873 778 .;locus=RLOC_00016791
Chr2	stalkie_big_nohaplotig	exon	41037321	41039285	95	+	.	Parent=comp162773_c0_seq1.mrna1;Target=comp162773_c0_seq1 1986 1 .
Chr2	stalkie_big_nohaplotig	exon	42967936	42967943	100	+	.	Parent=comp162773_c0_seq1.mrna1;Target=comp162773_c0_seq1 1994 1987 .
Chr2	stalkie_big_nohaplotig	exon	42971569	42971574	100	+	.	Parent=comp162773_c0_seq1.mrna1;Target=comp162773_c0_seq1 2000 1995 .
Chr2	stalkie_big_nohaplotig	exon	42973518	42973524	100	+	.	Parent=comp162773_c0_seq1.mrna1;Target=comp162773_c0_seq1 2007 2001 .
Chr2	stalkie_big_nohaplotig	CDS	41038082	41038169	.	+	0	Parent=comp162773_c0_seq1.mrna1
Chr2	gffcl	locus	41040746	41093219	.	-	.	ID=RLOC_00016792;geneIDs=FBgn0053143.1.path1;transcripts=FBgn0053143.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41040746	41093219	.	-	.	ID=FBgn0053143.1.mrna1;geneID=FBgn0053143.1.path1;Name=FBgn0053143.1;Dir=sensecoverage=100.0;identity=99.5;matches=1499;mismatches=7;indels=0;unknowns=0;locus=RLOC_00016792
Chr2	stalkie_big_nohaplotig	exon	41040746	41041324	99	-	.	Parent=FBgn0053143.1.mrna1;Target=FBgn0053143.1 928 1506 +
Chr2	stalkie_big_nohaplotig	exon	41042460	41042657	98	-	.	Parent=FBgn0053143.1.mrna1;Target=FBgn0053143.1 730 927 +
Chr2	stalkie_big_nohaplotig	exon	41059377	41059571	100	-	.	Parent=FBgn0053143.1.mrna1;Target=FBgn0053143.1 535 729 +
Chr2	stalkie_big_nohaplotig	exon	41060121	41060302	100	-	.	Parent=FBgn0053143.1.mrna1;Target=FBgn0053143.1 353 534 +
Chr2	stalkie_big_nohaplotig	exon	41060414	41060559	100	-	.	Parent=FBgn0053143.1.mrna1;Target=FBgn0053143.1 207 352 +
Chr2	stalkie_big_nohaplotig	exon	41084403	41084544	100	-	.	Parent=FBgn0053143.1.mrna1;Target=FBgn0053143.1 65 206 +
Chr2	stalkie_big_nohaplotig	exon	41093156	41093219	100	-	.	Parent=FBgn0053143.1.mrna1;Target=FBgn0053143.1 1 64 +
Chr2	stalkie_big_nohaplotig	CDS	41040746	41041324	.	-	0	Parent=FBgn0053143.1.mrna1;Target=FBgn0053143.1 928 1506 +
Chr2	stalkie_big_nohaplotig	CDS	41042460	41042657	.	-	0	Parent=FBgn0053143.1.mrna1;Target=FBgn0053143.1 730 927 +
Chr2	stalkie_big_nohaplotig	CDS	41059377	41059571	.	-	0	Parent=FBgn0053143.1.mrna1;Target=FBgn0053143.1 535 729 +
Chr2	stalkie_big_nohaplotig	CDS	41060121	41060302	.	-	2	Parent=FBgn0053143.1.mrna1;Target=FBgn0053143.1 353 534 +
Chr2	stalkie_big_nohaplotig	CDS	41060414	41060559	.	-	1	Parent=FBgn0053143.1.mrna1;Target=FBgn0053143.1 207 352 +
Chr2	stalkie_big_nohaplotig	CDS	41084403	41084544	.	-	2	Parent=FBgn0053143.1.mrna1;Target=FBgn0053143.1 65 206 +
Chr2	stalkie_big_nohaplotig	CDS	41093156	41093219	.	-	0	Parent=FBgn0053143.1.mrna1;Target=FBgn0053143.1 1 64 +
Chr2	gffcl	locus	41050163	41050565	.	-	.	ID=RLOC_00016793;geneIDs=comp153615_c1_seq1.path10;transcripts=comp153615_c1_seq1.mrna10
Chr2	stalkie_big_nohaplotig	mRNA	41050163	41050565	.	-	.	ID=comp153615_c1_seq1.mrna10;geneID=comp153615_c1_seq1.path10;Name=comp153615_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=402;mismatches=1;indels=0;unknowns=0;Target=comp153615_c1_seq1 403 1 .;CDS_Target=comp153615_c1_seq1 96 1 .;locus=RLOC_00016793
Chr2	stalkie_big_nohaplotig	exon	41050163	41050565	99	-	.	Parent=comp153615_c1_seq1.mrna10
Chr2	stalkie_big_nohaplotig	CDS	41050470	41050565	.	-	0	Parent=comp153615_c1_seq1.mrna10
Chr2	gffcl	locus	41056633	43028337	.	-	.	ID=RLOC_00016794;geneIDs=comp147656_c1_seq1.path1;transcripts=comp147656_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41056633	43028337	.	-	.	ID=comp147656_c1_seq1.mrna1;geneID=comp147656_c1_seq1.path1;Name=comp147656_c1_seq1;Dir=indeterminatecoverage=86.0;identity=94.1;matches=601;mismatches=0;indels=38;unknowns=0;locus=RLOC_00016794
Chr2	stalkie_big_nohaplotig	exon	41056633	41056641	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 773 765 .
Chr2	stalkie_big_nohaplotig	exon	41061760	41061765	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 764 759 .
Chr2	stalkie_big_nohaplotig	exon	41065732	41065740	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 753 745 .
Chr2	stalkie_big_nohaplotig	exon	41065777	41065785	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 706 698 .
Chr2	stalkie_big_nohaplotig	exon	41066886	41066891	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 697 692 .
Chr2	stalkie_big_nohaplotig	exon	41070363	41070407	28	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 691 679 .
Chr2	stalkie_big_nohaplotig	exon	41071622	41071624	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 678 676 .
Chr2	stalkie_big_nohaplotig	exon	41071631	41071639	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 665 657 .
Chr2	stalkie_big_nohaplotig	exon	41073073	41073078	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 656 651 .
Chr2	stalkie_big_nohaplotig	exon	41076914	41076916	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 650 648 .
Chr2	stalkie_big_nohaplotig	exon	41076934	41076941	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 609 602 .
Chr2	stalkie_big_nohaplotig	exon	41076951	41076959	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 581 573 .
Chr2	stalkie_big_nohaplotig	exon	41080261	41080264	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 572 569 .
Chr2	stalkie_big_nohaplotig	exon	41080713	41080718	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 568 563 .
Chr2	stalkie_big_nohaplotig	exon	41087944	41087946	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 562 560 .
Chr2	stalkie_big_nohaplotig	exon	41095632	41095634	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 559 557 .
Chr2	stalkie_big_nohaplotig	exon	41100162	41100171	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 533 524 .
Chr2	stalkie_big_nohaplotig	exon	41109169	41109175	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 523 517 .
Chr2	stalkie_big_nohaplotig	exon	41112799	41112803	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 516 512 .
Chr2	stalkie_big_nohaplotig	exon	41118556	41118559	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 511 508 .
Chr2	stalkie_big_nohaplotig	exon	41124390	41124392	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 507 505 .
Chr2	stalkie_big_nohaplotig	exon	41130874	41130879	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 504 499 .
Chr2	stalkie_big_nohaplotig	exon	41136230	41136236	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 498 492 .
Chr2	stalkie_big_nohaplotig	exon	41145426	41145429	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 491 488 .
Chr2	stalkie_big_nohaplotig	exon	41160991	41160993	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 487 485 .
Chr2	stalkie_big_nohaplotig	exon	41179811	41179813	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 484 482 .
Chr2	stalkie_big_nohaplotig	exon	41187491	41187493	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 481 479 .
Chr2	stalkie_big_nohaplotig	exon	41188171	41188180	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 470 461 .
Chr2	stalkie_big_nohaplotig	exon	41204509	41204510	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 460 459 .
Chr2	stalkie_big_nohaplotig	exon	41219175	41219179	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 458 454 .
Chr2	stalkie_big_nohaplotig	exon	41235328	41235345	66	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 453 442 .
Chr2	stalkie_big_nohaplotig	exon	41245284	41245292	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 440 432 .
Chr2	stalkie_big_nohaplotig	exon	43027938	43028337	100	-	.	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 431 32 .
Chr2	stalkie_big_nohaplotig	CDS	41130874	41130879	.	-	0	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 504 499 .
Chr2	stalkie_big_nohaplotig	CDS	41136230	41136236	.	-	1	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 498 492 .
Chr2	stalkie_big_nohaplotig	CDS	41145426	41145429	.	-	2	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 491 488 .
Chr2	stalkie_big_nohaplotig	CDS	41160991	41160993	.	-	2	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 487 485 .
Chr2	stalkie_big_nohaplotig	CDS	41179811	41179813	.	-	2	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 484 482 .
Chr2	stalkie_big_nohaplotig	CDS	41187491	41187493	.	-	2	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 481 479 .
Chr2	stalkie_big_nohaplotig	CDS	41188171	41188180	.	-	0	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 470 461 .
Chr2	stalkie_big_nohaplotig	CDS	41204509	41204510	.	-	2	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 460 459 .
Chr2	stalkie_big_nohaplotig	CDS	41219175	41219179	.	-	1	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 458 454 .
Chr2	stalkie_big_nohaplotig	CDS	41235328	41235345	.	-	1	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 453 442 .
Chr2	stalkie_big_nohaplotig	CDS	41245284	41245292	.	-	1	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 440 432 .
Chr2	stalkie_big_nohaplotig	CDS	43027938	43028026	.	-	0	Parent=comp147656_c1_seq1.mrna1;Target=comp147656_c1_seq1 431 343 .
Chr2	gffcl	locus	41112670	41118113	.	+	.	ID=RLOC_00016795;geneIDs=FBgn0034745.1.path1;transcripts=FBgn0034745.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41112670	41118113	.	+	.	ID=FBgn0034745.1.mrna1;geneID=FBgn0034745.1.path1;Name=FBgn0034745.1;Dir=sensecoverage=100.0;identity=99.8;matches=3586;mismatches=8;indels=0;unknowns=0;locus=RLOC_00016795
Chr2	stalkie_big_nohaplotig	exon	41112670	41112887	100	+	.	Parent=FBgn0034745.1.mrna1;Target=FBgn0034745.1 1 218 +
Chr2	stalkie_big_nohaplotig	exon	41112953	41113036	100	+	.	Parent=FBgn0034745.1.mrna1;Target=FBgn0034745.1 219 302 +
Chr2	stalkie_big_nohaplotig	exon	41113726	41114687	100	+	.	Parent=FBgn0034745.1.mrna1;Target=FBgn0034745.1 303 1264 +
Chr2	stalkie_big_nohaplotig	exon	41114755	41114924	100	+	.	Parent=FBgn0034745.1.mrna1;Target=FBgn0034745.1 1265 1434 +
Chr2	stalkie_big_nohaplotig	exon	41114984	41115118	100	+	.	Parent=FBgn0034745.1.mrna1;Target=FBgn0034745.1 1435 1569 +
Chr2	stalkie_big_nohaplotig	exon	41116089	41118113	99	+	.	Parent=FBgn0034745.1.mrna1;Target=FBgn0034745.1 1570 3594 +
Chr2	stalkie_big_nohaplotig	CDS	41112670	41112887	.	+	0	Parent=FBgn0034745.1.mrna1;Target=FBgn0034745.1 1 218 +
Chr2	stalkie_big_nohaplotig	CDS	41112953	41113036	.	+	1	Parent=FBgn0034745.1.mrna1;Target=FBgn0034745.1 219 302 +
Chr2	stalkie_big_nohaplotig	CDS	41113726	41114687	.	+	1	Parent=FBgn0034745.1.mrna1;Target=FBgn0034745.1 303 1264 +
Chr2	stalkie_big_nohaplotig	CDS	41114755	41114924	.	+	2	Parent=FBgn0034745.1.mrna1;Target=FBgn0034745.1 1265 1434 +
Chr2	stalkie_big_nohaplotig	CDS	41114984	41115118	.	+	0	Parent=FBgn0034745.1.mrna1;Target=FBgn0034745.1 1435 1569 +
Chr2	stalkie_big_nohaplotig	CDS	41116089	41118113	.	+	0	Parent=FBgn0034745.1.mrna1;Target=FBgn0034745.1 1570 3594 +
Chr2	gffcl	locus	41215671	41216132	.	-	.	ID=RLOC_00016796;geneIDs=comp139746_c0_seq1.path2;transcripts=comp139746_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	41215671	41216132	.	-	.	ID=comp139746_c0_seq1.mrna2;geneID=comp139746_c0_seq1.path2;Name=comp139746_c0_seq1;Dir=indeterminatecoverage=81.2;identity=97.2;matches=449;mismatches=13;indels=0;unknowns=0;Target=comp139746_c0_seq1 545 84 .;CDS_Target=comp139746_c0_seq1 283 176 .;locus=RLOC_00016796
Chr2	stalkie_big_nohaplotig	exon	41215671	41216132	97	-	.	Parent=comp139746_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	41215933	41216040	.	-	0	Parent=comp139746_c0_seq1.mrna2
Chr2	gffcl	locus	41218106	41220725	.	+	.	ID=RLOC_00016797;geneIDs=FBgn0032163.2.path1;transcripts=FBgn0032163.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41218106	41220725	.	+	.	ID=FBgn0032163.2.mrna1;geneID=FBgn0032163.2.path1;Name=FBgn0032163.2;Dir=sensecoverage=99.5;identity=97.3;matches=1596;mismatches=45;indels=0;unknowns=0;locus=RLOC_00016797
Chr2	stalkie_big_nohaplotig	exon	41218106	41218244	98	+	.	Parent=FBgn0032163.2.mrna1;Target=FBgn0032163.2 1 139 +
Chr2	stalkie_big_nohaplotig	exon	41218316	41218599	99	+	.	Parent=FBgn0032163.2.mrna1;Target=FBgn0032163.2 140 423 +
Chr2	stalkie_big_nohaplotig	exon	41218664	41218842	98	+	.	Parent=FBgn0032163.2.mrna1;Target=FBgn0032163.2 424 602 +
Chr2	stalkie_big_nohaplotig	exon	41218906	41219482	96	+	.	Parent=FBgn0032163.2.mrna1;Target=FBgn0032163.2 603 1179 +
Chr2	stalkie_big_nohaplotig	exon	41219558	41219892	97	+	.	Parent=FBgn0032163.2.mrna1;Target=FBgn0032163.2 1180 1514 +
Chr2	stalkie_big_nohaplotig	exon	41220599	41220725	90	+	.	Parent=FBgn0032163.2.mrna1;Target=FBgn0032163.2 1515 1641 +
Chr2	stalkie_big_nohaplotig	CDS	41218106	41218244	.	+	0	Parent=FBgn0032163.2.mrna1;Target=FBgn0032163.2 1 139 +
Chr2	stalkie_big_nohaplotig	CDS	41218316	41218599	.	+	2	Parent=FBgn0032163.2.mrna1;Target=FBgn0032163.2 140 423 +
Chr2	stalkie_big_nohaplotig	CDS	41218664	41218842	.	+	0	Parent=FBgn0032163.2.mrna1;Target=FBgn0032163.2 424 602 +
Chr2	stalkie_big_nohaplotig	CDS	41218906	41219482	.	+	1	Parent=FBgn0032163.2.mrna1;Target=FBgn0032163.2 603 1179 +
Chr2	stalkie_big_nohaplotig	CDS	41219558	41219892	.	+	0	Parent=FBgn0032163.2.mrna1;Target=FBgn0032163.2 1180 1514 +
Chr2	stalkie_big_nohaplotig	CDS	41220599	41220725	.	+	1	Parent=FBgn0032163.2.mrna1;Target=FBgn0032163.2 1515 1641 +
Chr2	gffcl	locus	41311835	41312443	.	-	.	ID=RLOC_00016799;geneIDs=comp57086_c0_seq1.path2;transcripts=comp57086_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	41311835	41312443	.	-	.	ID=comp57086_c0_seq1.mrna2;geneID=comp57086_c0_seq1.path2;Name=comp57086_c0_seq1;Dir=antisensecoverage=91.1;identity=99.8;matches=533;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016799
Chr2	stalkie_big_nohaplotig	exon	41311835	41312057	99	-	.	Parent=comp57086_c0_seq1.mrna2;Target=comp57086_c0_seq1 43 265 -
Chr2	stalkie_big_nohaplotig	exon	41312133	41312443	100	-	.	Parent=comp57086_c0_seq1.mrna2;Target=comp57086_c0_seq1 266 576 -
Chr2	stalkie_big_nohaplotig	CDS	41311863	41312057	.	-	0	Parent=comp57086_c0_seq1.mrna2;Target=comp57086_c0_seq1 71 265 .
Chr2	stalkie_big_nohaplotig	CDS	41312133	41312441	.	-	0	Parent=comp57086_c0_seq1.mrna2;Target=comp57086_c0_seq1 266 574 .
Chr2	gffcl	locus	41343880	41344490	.	-	.	ID=RLOC_00016800;geneIDs=comp57086_c0_seq1.path1;transcripts=comp57086_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41343880	41344490	.	-	.	ID=comp57086_c0_seq1.mrna1;geneID=comp57086_c0_seq1.path1;Name=comp57086_c0_seq1;Dir=antisensecoverage=91.5;identity=100.0;matches=536;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016800
Chr2	stalkie_big_nohaplotig	exon	41343880	41344102	100	-	.	Parent=comp57086_c0_seq1.mrna1;Target=comp57086_c0_seq1 43 265 -
Chr2	stalkie_big_nohaplotig	exon	41344178	41344490	100	-	.	Parent=comp57086_c0_seq1.mrna1;Target=comp57086_c0_seq1 266 578 -
Chr2	stalkie_big_nohaplotig	CDS	41343908	41344102	.	-	0	Parent=comp57086_c0_seq1.mrna1;Target=comp57086_c0_seq1 71 265 .
Chr2	stalkie_big_nohaplotig	CDS	41344178	41344489	.	-	0	Parent=comp57086_c0_seq1.mrna1;Target=comp57086_c0_seq1 266 577 .
Chr2	gffcl	locus	41402738	41404052	.	-	.	ID=RLOC_00016801;geneIDs=FBgn0032163.3.path1;transcripts=FBgn0032163.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41402738	41404052	.	-	.	ID=FBgn0032163.3.mrna1;geneID=FBgn0032163.3.path1;Name=FBgn0032163.3;Dir=sensecoverage=99.8;identity=99.2;matches=1111;mismatches=9;indels=0;unknowns=0;locus=RLOC_00016801
Chr2	stalkie_big_nohaplotig	exon	41402738	41403255	99	-	.	Parent=FBgn0032163.3.mrna1;Target=FBgn0032163.3 603 1120 +
Chr2	stalkie_big_nohaplotig	exon	41403319	41403497	98	-	.	Parent=FBgn0032163.3.mrna1;Target=FBgn0032163.3 424 602 +
Chr2	stalkie_big_nohaplotig	exon	41403562	41403845	98	-	.	Parent=FBgn0032163.3.mrna1;Target=FBgn0032163.3 140 423 +
Chr2	stalkie_big_nohaplotig	exon	41403914	41404052	99	-	.	Parent=FBgn0032163.3.mrna1;Target=FBgn0032163.3 1 139 +
Chr2	stalkie_big_nohaplotig	CDS	41402739	41403255	.	-	1	Parent=FBgn0032163.3.mrna1;Target=FBgn0032163.3 603 1119 +
Chr2	stalkie_big_nohaplotig	CDS	41403319	41403497	.	-	0	Parent=FBgn0032163.3.mrna1;Target=FBgn0032163.3 424 602 +
Chr2	stalkie_big_nohaplotig	CDS	41403562	41403845	.	-	2	Parent=FBgn0032163.3.mrna1;Target=FBgn0032163.3 140 423 +
Chr2	stalkie_big_nohaplotig	CDS	41403914	41404052	.	-	0	Parent=FBgn0032163.3.mrna1;Target=FBgn0032163.3 1 139 +
Chr2	gffcl	locus	41410949	41413071	.	-	.	ID=RLOC_00016802;geneIDs=comp130818_c0_seq1.path1,comp139746_c0_seq1.path1;transcripts=comp139746_c0_seq1.mrna1,comp130818_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41410949	41413071	.	-	.	ID=comp139746_c0_seq1.mrna1;geneID=comp139746_c0_seq1.path1;Name=comp139746_c0_seq1;Dir=antisensecoverage=94.2;identity=95.3;matches=511;mismatches=25;indels=0;unknowns=0;Target=comp139746_c0_seq1 261 320 .;locus=RLOC_00016802
Chr2	stalkie_big_nohaplotig	exon	41410949	41411461	95	-	.	Parent=comp139746_c0_seq1.mrna1;Target=comp139746_c0_seq1 34 546 -
Chr2	stalkie_big_nohaplotig	exon	41413049	41413071	100	-	.	Parent=comp139746_c0_seq1.mrna1;Target=comp139746_c0_seq1 547 569 -
Chr2	stalkie_big_nohaplotig	CDS	41411176	41411235	.	-	0	Parent=comp139746_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41412518	41413071	.	-	.	ID=comp130818_c0_seq1.mrna1;geneID=comp130818_c0_seq1.path1;Name=comp130818_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=554;mismatches=0;indels=0;unknowns=0;Target=comp130818_c0_seq1 554 1 .;CDS_Target=comp130818_c0_seq1 268 176 .;locus=RLOC_00016802
Chr2	stalkie_big_nohaplotig	exon	41412518	41413071	100	-	.	Parent=comp130818_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	41412804	41412896	.	-	0	Parent=comp130818_c0_seq1.mrna1
Chr2	gffcl	locus	41418439	41419314	.	.	.	ID=RLOC_00016803;geneIDs=comp134976_c0_seq1.path1,comp135324_c0_seq1.path1;transcripts=comp134976_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41418439	41419012	.	-	.	ID=comp134976_c0_seq1.mrna1;geneID=comp134976_c0_seq1.path1;Name=comp134976_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=568;mismatches=6;indels=5;unknowns=0;Target=comp134976_c0_seq1 579 1 .;CDS_Target=comp134976_c0_seq1 169 98 .;locus=RLOC_00016803
Chr2	stalkie_big_nohaplotig	exon	41418439	41419012	98	-	.	Parent=comp134976_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	41418848	41418917	.	-	0	Parent=comp134976_c0_seq1.mrna1
Chr2	gffcl	locus	41419474	41421357	.	.	.	ID=RLOC_00016804;geneIDs=comp143426_c0_seq1.path1,comp159207_c0_seq1.path1;transcripts=comp159207_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41419474	41421208	.	-	.	ID=comp159207_c0_seq1.mrna1;geneID=comp159207_c0_seq1.path1;Name=comp159207_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.1;matches=1708;mismatches=24;indels=9;unknowns=0;Target=comp159207_c0_seq1 1738 1 .;CDS_Target=comp159207_c0_seq1 1542 1237 .;locus=RLOC_00016804
Chr2	stalkie_big_nohaplotig	exon	41419474	41421208	98	-	.	Parent=comp159207_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	41419670	41419975	.	-	0	Parent=comp159207_c0_seq1.mrna1
Chr2	gffcl	locus	41425139	43023911	.	+	.	ID=RLOC_00016805;geneIDs=comp122330_c1_seq1.path1;transcripts=comp122330_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41425139	43023911	.	+	.	ID=comp122330_c1_seq1.mrna1;geneID=comp122330_c1_seq1.path1;Name=comp122330_c1_seq1;Dir=indeterminatecoverage=79.5;identity=97.1;matches=303;mismatches=0;indels=9;unknowns=0;Target=comp122330_c1_seq1 113 3 .;locus=RLOC_00016805
Chr2	stalkie_big_nohaplotig	exon	41425139	41425399	100	+	.	Parent=comp122330_c1_seq1.mrna1;Target=comp122330_c1_seq1 261 1 .
Chr2	stalkie_big_nohaplotig	exon	42988194	42988200	100	+	.	Parent=comp122330_c1_seq1.mrna1;Target=comp122330_c1_seq1 268 262 .
Chr2	stalkie_big_nohaplotig	exon	42996308	42996322	40	+	.	Parent=comp122330_c1_seq1.mrna1;Target=comp122330_c1_seq1 274 269 .
Chr2	stalkie_big_nohaplotig	exon	42999314	42999319	100	+	.	Parent=comp122330_c1_seq1.mrna1;Target=comp122330_c1_seq1 280 275 .
Chr2	stalkie_big_nohaplotig	exon	43007124	43007133	100	+	.	Parent=comp122330_c1_seq1.mrna1;Target=comp122330_c1_seq1 290 281 .
Chr2	stalkie_big_nohaplotig	exon	43008977	43008978	100	+	.	Parent=comp122330_c1_seq1.mrna1;Target=comp122330_c1_seq1 292 291 .
Chr2	stalkie_big_nohaplotig	exon	43013755	43013756	100	+	.	Parent=comp122330_c1_seq1.mrna1;Target=comp122330_c1_seq1 294 293 .
Chr2	stalkie_big_nohaplotig	exon	43015052	43015054	100	+	.	Parent=comp122330_c1_seq1.mrna1;Target=comp122330_c1_seq1 297 295 .
Chr2	stalkie_big_nohaplotig	exon	43023906	43023911	100	+	.	Parent=comp122330_c1_seq1.mrna1;Target=comp122330_c1_seq1 303 298 .
Chr2	stalkie_big_nohaplotig	CDS	41425141	41425251	.	+	0	Parent=comp122330_c1_seq1.mrna1
Chr2	gffcl	locus	41431581	41497324	.	-	.	ID=RLOC_00016806;geneIDs=comp144487_c0_seq1.path1,comp160187_c0_seq1.path1;transcripts=comp160187_c0_seq1.mrna1,comp144487_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41431581	41497324	.	-	.	ID=comp160187_c0_seq1.mrna1;geneID=comp160187_c0_seq1.path1;Name=comp160187_c0_seq1;Dir=indeterminatecoverage=85.9;identity=91.8;matches=1313;mismatches=42;indels=76;unknowns=0;Target=comp160187_c0_seq1 1564 1355 .;locus=RLOC_00016806
Chr2	stalkie_big_nohaplotig	exon	41431581	41432741	99	-	.	Parent=comp160187_c0_seq1.mrna1;Target=comp160187_c0_seq1 1670 511 .
Chr2	stalkie_big_nohaplotig	exon	41458086	41458149	84	-	.	Parent=comp160187_c0_seq1.mrna1;Target=comp160187_c0_seq1 510 447 .
Chr2	stalkie_big_nohaplotig	exon	41472202	41472213	100	-	.	Parent=comp160187_c0_seq1.mrna1;Target=comp160187_c0_seq1 446 435 .
Chr2	stalkie_big_nohaplotig	exon	41478620	41478642	56	-	.	Parent=comp160187_c0_seq1.mrna1;Target=comp160187_c0_seq1 434 398 .
Chr2	stalkie_big_nohaplotig	exon	41483835	41483849	86	-	.	Parent=comp160187_c0_seq1.mrna1;Target=comp160187_c0_seq1 393 380 .
Chr2	stalkie_big_nohaplotig	exon	41485561	41485564	100	-	.	Parent=comp160187_c0_seq1.mrna1;Target=comp160187_c0_seq1 379 376 .
Chr2	stalkie_big_nohaplotig	exon	41487880	41487923	44	-	.	Parent=comp160187_c0_seq1.mrna1;Target=comp160187_c0_seq1 374 307 .
Chr2	stalkie_big_nohaplotig	exon	41491939	41491961	33	-	.	Parent=comp160187_c0_seq1.mrna1;Target=comp160187_c0_seq1 306 248 .
Chr2	stalkie_big_nohaplotig	exon	41497314	41497324	81	-	.	Parent=comp160187_c0_seq1.mrna1;Target=comp160187_c0_seq1 247 237 .
Chr2	stalkie_big_nohaplotig	CDS	41431688	41431897	.	-	0	Parent=comp160187_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41483768	41484378	.	-	.	ID=comp144487_c0_seq1.mrna1;geneID=comp144487_c0_seq1.path1;Name=comp144487_c0_seq1;Dir=indeterminatecoverage=96.2;identity=93.8;matches=576;mismatches=35;indels=3;unknowns=0;Target=comp144487_c0_seq1 638 25 .;CDS_Target=comp144487_c0_seq1 221 27 .;locus=RLOC_00016806
Chr2	stalkie_big_nohaplotig	exon	41483768	41484378	93	-	.	Parent=comp144487_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	41484185	41484376	.	-	0	Parent=comp144487_c0_seq1.mrna1
Chr2	gffcl	locus	41433483	41434998	.	+	.	ID=RLOC_00016807;geneIDs=comp157975_c0_seq1.path1;transcripts=comp157975_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41433483	41434998	.	+	.	ID=comp157975_c0_seq1.mrna1;geneID=comp157975_c0_seq1.path1;Name=comp157975_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=1504;mismatches=12;indels=18;unknowns=0;Target=comp157975_c0_seq1 1534 1 .;CDS_Target=comp157975_c0_seq1 664 572 .;locus=RLOC_00016807
Chr2	stalkie_big_nohaplotig	exon	41433483	41434998	98	+	.	Parent=comp157975_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	41434053	41434134	.	+	0	Parent=comp157975_c0_seq1.mrna1
Chr2	gffcl	locus	41437426	41439521	.	+	.	ID=RLOC_00016808;geneIDs=comp152435_c0_seq1.path1;transcripts=comp152435_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41437426	41439521	.	+	.	ID=comp152435_c0_seq1.mrna1;geneID=comp152435_c0_seq1.path1;Name=comp152435_c0_seq1;Dir=sensecoverage=100.0;identity=96.2;matches=767;mismatches=14;indels=16;unknowns=0;Target=comp152435_c0_seq1 670 690 +;locus=RLOC_00016808
Chr2	stalkie_big_nohaplotig	exon	41437426	41438064	96	+	.	Parent=comp152435_c0_seq1.mrna1;Target=comp152435_c0_seq1 1 649 +
Chr2	stalkie_big_nohaplotig	exon	41439376	41439521	95	+	.	Parent=comp152435_c0_seq1.mrna1;Target=comp152435_c0_seq1 650 793 +
Chr2	stalkie_big_nohaplotig	CDS	41439396	41439416	.	+	0	Parent=comp152435_c0_seq1.mrna1
Chr2	gffcl	locus	41441911	41442814	.	+	.	ID=RLOC_00016809;geneIDs=comp153955_c1_seq1.path1;transcripts=comp153955_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41441911	41442814	.	+	.	ID=comp153955_c1_seq1.mrna1;geneID=comp153955_c1_seq1.path1;Name=comp153955_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=883;mismatches=21;indels=0;unknowns=0;Target=comp153955_c1_seq1 904 1 .;CDS_Target=comp153955_c1_seq1 111 1 .;locus=RLOC_00016809
Chr2	stalkie_big_nohaplotig	exon	41441911	41442814	97	+	.	Parent=comp153955_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	41441911	41442021	.	+	0	Parent=comp153955_c1_seq1.mrna1
Chr2	gffcl	locus	41459741	41460503	.	+	.	ID=RLOC_00016810;geneIDs=comp147339_c0_seq1.path1;transcripts=comp147339_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41459741	41460503	.	+	.	ID=comp147339_c0_seq1.mrna1;geneID=comp147339_c0_seq1.path1;Name=comp147339_c0_seq1;Dir=antisensecoverage=99.8;identity=97.3;matches=568;mismatches=15;indels=1;unknowns=0;Target=comp147339_c0_seq1 247 327 .;locus=RLOC_00016810
Chr2	stalkie_big_nohaplotig	exon	41459741	41460080	98	+	.	Parent=comp147339_c0_seq1.mrna1;Target=comp147339_c0_seq1 246 585 -
Chr2	stalkie_big_nohaplotig	exon	41460261	41460503	95	+	.	Parent=comp147339_c0_seq1.mrna1;Target=comp147339_c0_seq1 2 245 -
Chr2	stalkie_big_nohaplotig	CDS	41459999	41460079	.	+	0	Parent=comp147339_c0_seq1.mrna1
Chr2	gffcl	locus	41473878	41475774	.	-	.	ID=RLOC_00016811;geneIDs=comp154772_c0_seq1.path1;transcripts=comp154772_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41473878	41475774	.	-	.	ID=comp154772_c0_seq1.mrna1;geneID=comp154772_c0_seq1.path1;Name=comp154772_c0_seq1;Dir=sensecoverage=97.1;identity=98.9;matches=823;mismatches=8;indels=1;unknowns=0;Target=comp154772_c0_seq1 349 438 +;locus=RLOC_00016811
Chr2	stalkie_big_nohaplotig	exon	41473878	41474267	100	-	.	Parent=comp154772_c0_seq1.mrna1;Target=comp154772_c0_seq1 467 856 +
Chr2	stalkie_big_nohaplotig	exon	41475276	41475439	95	-	.	Parent=comp154772_c0_seq1.mrna1;Target=comp154772_c0_seq1 302 466 +
Chr2	stalkie_big_nohaplotig	exon	41475498	41475774	99	-	.	Parent=comp154772_c0_seq1.mrna1;Target=comp154772_c0_seq1 25 301 +
Chr2	stalkie_big_nohaplotig	CDS	41475304	41475392	.	-	0	Parent=comp154772_c0_seq1.mrna1
Chr2	gffcl	locus	41477666	41761567	.	-	.	ID=RLOC_00016812;geneIDs=FBgn0010488.1.path1,FBgn0016641.1.path1,FBgn0050035.1.path2,comp157365_c0_seq1.path1,comp158146_c0_seq1.path1;transcripts=comp157365_c0_seq1.mrna1,FBgn0050035.1.mrna2,comp158146_c0_seq1.mrna1,FBgn0016641.1.mrna1,FBgn0010488.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41477666	41757047	.	-	.	ID=comp157365_c0_seq1.mrna1;geneID=comp157365_c0_seq1.path1;Name=comp157365_c0_seq1;Dir=indeterminatecoverage=91.4;identity=93.1;matches=1699;mismatches=56;indels=70;unknowns=0;Target=comp157365_c0_seq1 1268 972 .;locus=RLOC_00016812
Chr2	stalkie_big_nohaplotig	exon	41477666	41477692	88	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1824 1798 .
Chr2	stalkie_big_nohaplotig	exon	41486019	41486022	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1797 1794 .
Chr2	stalkie_big_nohaplotig	exon	41493425	41493428	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1793 1790 .
Chr2	stalkie_big_nohaplotig	exon	41521908	41521911	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1789 1786 .
Chr2	stalkie_big_nohaplotig	exon	41525369	41525376	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1785 1778 .
Chr2	stalkie_big_nohaplotig	exon	41531648	41531653	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1777 1772 .
Chr2	stalkie_big_nohaplotig	exon	41537185	41537213	62	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1771 1750 .
Chr2	stalkie_big_nohaplotig	exon	41556924	41556932	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1749 1741 .
Chr2	stalkie_big_nohaplotig	exon	41570329	41570332	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1740 1737 .
Chr2	stalkie_big_nohaplotig	exon	41575684	41575694	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1736 1726 .
Chr2	stalkie_big_nohaplotig	exon	41579133	41579134	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1725 1724 .
Chr2	stalkie_big_nohaplotig	exon	41600032	41600035	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1723 1720 .
Chr2	stalkie_big_nohaplotig	exon	41604765	41604771	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1718 1712 .
Chr2	stalkie_big_nohaplotig	exon	41610321	41610326	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1711 1706 .
Chr2	stalkie_big_nohaplotig	exon	41612982	41612986	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1705 1701 .
Chr2	stalkie_big_nohaplotig	exon	41618326	41618332	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1700 1694 .
Chr2	stalkie_big_nohaplotig	exon	41633900	41633906	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1693 1687 .
Chr2	stalkie_big_nohaplotig	exon	41642798	41642809	83	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1686 1675 .
Chr2	stalkie_big_nohaplotig	exon	41650704	41650712	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1674 1666 .
Chr2	stalkie_big_nohaplotig	exon	41682101	41682105	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1665 1661 .
Chr2	stalkie_big_nohaplotig	exon	41686340	41686341	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1660 1659 .
Chr2	stalkie_big_nohaplotig	exon	41693443	41693448	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1658 1653 .
Chr2	stalkie_big_nohaplotig	exon	41697442	41697445	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1652 1649 .
Chr2	stalkie_big_nohaplotig	exon	41703563	41703564	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1648 1647 .
Chr2	stalkie_big_nohaplotig	exon	41709472	41709476	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1646 1642 .
Chr2	stalkie_big_nohaplotig	exon	41716339	41716345	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1641 1635 .
Chr2	stalkie_big_nohaplotig	exon	41720210	41720222	84	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1634 1622 .
Chr2	stalkie_big_nohaplotig	exon	41727854	41727857	75	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1621 1618 .
Chr2	stalkie_big_nohaplotig	exon	41733465	41733468	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1617 1614 .
Chr2	stalkie_big_nohaplotig	exon	41734663	41734670	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1602 1595 .
Chr2	stalkie_big_nohaplotig	exon	41737130	41737137	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1594 1587 .
Chr2	stalkie_big_nohaplotig	exon	41738706	41738711	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1586 1581 .
Chr2	stalkie_big_nohaplotig	exon	41739882	41739885	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1580 1577 .
Chr2	stalkie_big_nohaplotig	exon	41743340	41743341	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1576 1575 .
Chr2	stalkie_big_nohaplotig	exon	41743718	41743720	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1574 1572 .
Chr2	stalkie_big_nohaplotig	exon	41747672	41747675	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1571 1568 .
Chr2	stalkie_big_nohaplotig	exon	41749929	41749934	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1559 1554 .
Chr2	stalkie_big_nohaplotig	exon	41753902	41753911	90	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1553 1544 .
Chr2	stalkie_big_nohaplotig	exon	41755311	41755318	100	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1543 1536 .
Chr2	stalkie_big_nohaplotig	exon	41755540	41757047	93	-	.	Parent=comp157365_c0_seq1.mrna1;Target=comp157365_c0_seq1 1535 9 .
Chr2	stalkie_big_nohaplotig	CDS	41755807	41756103	.	-	0	Parent=comp157365_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41556919	41636650	.	-	.	ID=FBgn0050035.1.mrna2;geneID=FBgn0050035.1.path2;Name=FBgn0050035.1;Dir=sensecoverage=65.3;identity=99.3;matches=1586;mismatches=11;indels=0;unknowns=0;locus=RLOC_00016812
Chr2	stalkie_big_nohaplotig	exon	41556919	41557103	100	-	.	Parent=FBgn0050035.1.mrna2;Target=FBgn0050035.1 2354 2538 +
Chr2	stalkie_big_nohaplotig	exon	41557174	41557459	100	-	.	Parent=FBgn0050035.1.mrna2;Target=FBgn0050035.1 2068 2353 +
Chr2	stalkie_big_nohaplotig	exon	41557528	41558313	99	-	.	Parent=FBgn0050035.1.mrna2;Target=FBgn0050035.1 1282 2067 +
Chr2	stalkie_big_nohaplotig	exon	41559979	41560104	100	-	.	Parent=FBgn0050035.1.mrna2;Target=FBgn0050035.1 1156 1281 +
Chr2	stalkie_big_nohaplotig	exon	41563999	41564151	98	-	.	Parent=FBgn0050035.1.mrna2;Target=FBgn0050035.1 1003 1155 +
Chr2	stalkie_big_nohaplotig	exon	41585364	41585371	100	-	.	Parent=FBgn0050035.1.mrna2;Target=FBgn0050035.1 978 985 +
Chr2	stalkie_big_nohaplotig	exon	41595960	41595970	90	-	.	Parent=FBgn0050035.1.mrna2;Target=FBgn0050035.1 962 972 +
Chr2	stalkie_big_nohaplotig	exon	41608307	41608317	100	-	.	Parent=FBgn0050035.1.mrna2;Target=FBgn0050035.1 910 920 +
Chr2	stalkie_big_nohaplotig	exon	41613199	41613209	81	-	.	Parent=FBgn0050035.1.mrna2;Target=FBgn0050035.1 899 909 +
Chr2	stalkie_big_nohaplotig	exon	41613696	41613702	85	-	.	Parent=FBgn0050035.1.mrna2;Target=FBgn0050035.1 892 898 +
Chr2	stalkie_big_nohaplotig	exon	41620999	41621006	100	-	.	Parent=FBgn0050035.1.mrna2;Target=FBgn0050035.1 884 891 +
Chr2	stalkie_big_nohaplotig	exon	41636649	41636650	100	-	.	Parent=FBgn0050035.1.mrna2;Target=FBgn0050035.1 882 883 +
Chr2	stalkie_big_nohaplotig	CDS	41556919	41557103	.	-	2	Parent=FBgn0050035.1.mrna2;Target=FBgn0050035.1 2354 2538 +
Chr2	stalkie_big_nohaplotig	CDS	41557174	41557459	.	-	0	Parent=FBgn0050035.1.mrna2;Target=FBgn0050035.1 2068 2353 +
Chr2	stalkie_big_nohaplotig	CDS	41557528	41558313	.	-	0	Parent=FBgn0050035.1.mrna2;Target=FBgn0050035.1 1282 2067 +
Chr2	stalkie_big_nohaplotig	CDS	41559979	41560104	.	-	0	Parent=FBgn0050035.1.mrna2;Target=FBgn0050035.1 1156 1281 +
Chr2	stalkie_big_nohaplotig	CDS	41563999	41564133	.	-	0	Parent=FBgn0050035.1.mrna2;Target=FBgn0050035.1 1021 1155 +
Chr2	stalkie_big_nohaplotig	mRNA	41560072	41561387	.	-	.	ID=comp158146_c0_seq1.mrna1;geneID=comp158146_c0_seq1.path1;Name=comp158146_c0_seq1;Dir=indeterminatecoverage=99.5;identity=97.8;matches=1297;mismatches=19;indels=10;unknowns=0;Target=comp158146_c0_seq1 1332 7 .;CDS_Target=comp158146_c0_seq1 176 48 .;locus=RLOC_00016812
Chr2	stalkie_big_nohaplotig	exon	41560072	41561387	97	-	.	Parent=comp158146_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	41561218	41561346	.	-	0	Parent=comp158146_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41635149	41639907	.	-	.	ID=FBgn0016641.1.mrna1;geneID=FBgn0016641.1.path1;Name=FBgn0016641.1;Dir=sensecoverage=100.0;identity=99.3;matches=4673;mismatches=31;indels=0;unknowns=0;locus=RLOC_00016812
Chr2	stalkie_big_nohaplotig	exon	41635149	41636507	99	-	.	Parent=FBgn0016641.1.mrna1;Target=FBgn0016641.1 3346 4704 +
Chr2	stalkie_big_nohaplotig	exon	41636563	41639907	99	-	.	Parent=FBgn0016641.1.mrna1;Target=FBgn0016641.1 1 3345 +
Chr2	stalkie_big_nohaplotig	CDS	41635149	41636507	.	-	0	Parent=FBgn0016641.1.mrna1;Target=FBgn0016641.1 3346 4704 +
Chr2	stalkie_big_nohaplotig	CDS	41636563	41639907	.	-	0	Parent=FBgn0016641.1.mrna1;Target=FBgn0016641.1 1 3345 +
Chr2	stalkie_big_nohaplotig	mRNA	41755165	41761567	.	-	.	ID=FBgn0010488.1.mrna1;geneID=FBgn0010488.1.path1;Name=FBgn0010488.1;Dir=sensecoverage=100.0;identity=99.6;matches=4428;mismatches=17;indels=1;unknowns=0;Target=FBgn0010488.1 3 65 +;locus=RLOC_00016812
Chr2	stalkie_big_nohaplotig	exon	41755165	41755340	100	-	.	Parent=FBgn0010488.1.mrna1;Target=FBgn0010488.1 4271 4446 +
Chr2	stalkie_big_nohaplotig	exon	41757054	41757240	98	-	.	Parent=FBgn0010488.1.mrna1;Target=FBgn0010488.1 4084 4270 +
Chr2	stalkie_big_nohaplotig	exon	41757308	41758859	99	-	.	Parent=FBgn0010488.1.mrna1;Target=FBgn0010488.1 2532 4083 +
Chr2	stalkie_big_nohaplotig	exon	41758937	41759865	99	-	.	Parent=FBgn0010488.1.mrna1;Target=FBgn0010488.1 1603 2531 +
Chr2	stalkie_big_nohaplotig	exon	41759967	41761567	99	-	.	Parent=FBgn0010488.1.mrna1;Target=FBgn0010488.1 1 1602 +
Chr2	stalkie_big_nohaplotig	CDS	41761504	41761565	.	-	0	Parent=FBgn0010488.1.mrna1
Chr2	gffcl	locus	41478223	41488732	.	+	.	ID=RLOC_00016813;geneIDs=FBgn0010470.1.path1,comp117817_c0_seq1.path1;transcripts=FBgn0010470.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41478223	41488373	.	+	.	ID=FBgn0010470.1.mrna1;geneID=FBgn0010470.1.path1;Name=FBgn0010470.1;Dir=sensecoverage=33.3;identity=100.0;matches=227;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016813
Chr2	stalkie_big_nohaplotig	exon	41478223	41478268	100	+	.	Parent=FBgn0010470.1.mrna1;Target=FBgn0010470.1 1 46 +
Chr2	stalkie_big_nohaplotig	exon	41488193	41488373	100	+	.	Parent=FBgn0010470.1.mrna1;Target=FBgn0010470.1 47 227 +
Chr2	stalkie_big_nohaplotig	CDS	41478223	41478268	.	+	0	Parent=FBgn0010470.1.mrna1;Target=FBgn0010470.1 1 46 +
Chr2	stalkie_big_nohaplotig	CDS	41488193	41488373	.	+	2	Parent=FBgn0010470.1.mrna1;Target=FBgn0010470.1 47 227 +
Chr2	gffcl	locus	41530617	41535855	.	+	.	ID=RLOC_00016814;geneIDs=FBgn0050035.1.path1;transcripts=FBgn0050035.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41530617	41535855	.	+	.	ID=FBgn0050035.1.mrna1;geneID=FBgn0050035.1.path1;Name=FBgn0050035.1;Dir=sensecoverage=34.7;identity=92.9;matches=776;mismatches=26;indels=33;unknowns=0;locus=RLOC_00016814
Chr2	stalkie_big_nohaplotig	exon	41530617	41530721	99	+	.	Parent=FBgn0050035.1.mrna1;Target=FBgn0050035.1 1 105 +
Chr2	stalkie_big_nohaplotig	exon	41535054	41535549	99	+	.	Parent=FBgn0050035.1.mrna1;Target=FBgn0050035.1 106 601 +
Chr2	stalkie_big_nohaplotig	exon	41535654	41535855	76	+	.	Parent=FBgn0050035.1.mrna1;Target=FBgn0050035.1 651 881 +
Chr2	gffcl	locus	41539982	41540834	.	-	.	ID=RLOC_00016815;geneIDs=comp148597_c1_seq1.path1;transcripts=comp148597_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41539982	41540834	.	-	.	ID=comp148597_c1_seq1.mrna1;geneID=comp148597_c1_seq1.path1;Name=comp148597_c1_seq1;Dir=indeterminatecoverage=100.0;identity=95.4;matches=814;mismatches=25;indels=14;unknowns=0;Target=comp148597_c1_seq1 839 1 .;CDS_Target=comp148597_c1_seq1 676 626 .;locus=RLOC_00016815
Chr2	stalkie_big_nohaplotig	exon	41539982	41540834	95	-	.	Parent=comp148597_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	41540151	41540205	.	-	0	Parent=comp148597_c1_seq1.mrna1
Chr2	gffcl	locus	41544526	41550197	.	+	.	ID=RLOC_00016816;geneIDs=FBgn0021818.1.path1;transcripts=FBgn0021818.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41544526	41550197	.	+	.	ID=FBgn0021818.1.mrna1;geneID=FBgn0021818.1.path1;Name=FBgn0021818.1;Dir=sensecoverage=100.0;identity=99.4;matches=4500;mismatches=21;indels=6;unknowns=0;locus=RLOC_00016816
Chr2	stalkie_big_nohaplotig	exon	41544526	41544595	100	+	.	Parent=FBgn0021818.1.mrna1;Target=FBgn0021818.1 1 70 +
Chr2	stalkie_big_nohaplotig	exon	41544652	41544815	99	+	.	Parent=FBgn0021818.1.mrna1;Target=FBgn0021818.1 71 234 +
Chr2	stalkie_big_nohaplotig	exon	41544877	41546976	99	+	.	Parent=FBgn0021818.1.mrna1;Target=FBgn0021818.1 235 2334 +
Chr2	stalkie_big_nohaplotig	exon	41548005	41550197	98	+	.	Parent=FBgn0021818.1.mrna1;Target=FBgn0021818.1 2335 4521 +
Chr2	stalkie_big_nohaplotig	CDS	41544526	41544595	.	+	0	Parent=FBgn0021818.1.mrna1;Target=FBgn0021818.1 1 70 +
Chr2	stalkie_big_nohaplotig	CDS	41544652	41544815	.	+	2	Parent=FBgn0021818.1.mrna1;Target=FBgn0021818.1 71 234 +
Chr2	stalkie_big_nohaplotig	CDS	41544877	41546976	.	+	0	Parent=FBgn0021818.1.mrna1;Target=FBgn0021818.1 235 2334 +
Chr2	stalkie_big_nohaplotig	CDS	41548005	41550197	.	+	0	Parent=FBgn0021818.1.mrna1;Target=FBgn0021818.1 2335 4521 +
Chr2	gffcl	locus	41550523	41551310	.	-	.	ID=RLOC_00016817;geneIDs=FBgn0016697.1.path1;transcripts=FBgn0016697.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41550523	41551310	.	-	.	ID=FBgn0016697.1.mrna1;geneID=FBgn0016697.1.path1;Name=FBgn0016697.1;Dir=sensecoverage=98.8;identity=99.4;matches=722;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016817
Chr2	stalkie_big_nohaplotig	exon	41550523	41551115	99	-	.	Parent=FBgn0016697.1.mrna1;Target=FBgn0016697.1 143 735 +
Chr2	stalkie_big_nohaplotig	exon	41551178	41551310	99	-	.	Parent=FBgn0016697.1.mrna1;Target=FBgn0016697.1 10 142 +
Chr2	stalkie_big_nohaplotig	CDS	41550523	41551115	.	-	2	Parent=FBgn0016697.1.mrna1;Target=FBgn0016697.1 143 735 +
Chr2	stalkie_big_nohaplotig	CDS	41551178	41551310	.	-	0	Parent=FBgn0016697.1.mrna1;Target=FBgn0016697.1 10 142 +
Chr2	gffcl	locus	41553044	41604381	.	+	.	ID=RLOC_00016818;geneIDs=FBgn0044020.1.path1;transcripts=FBgn0044020.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41553044	41604381	.	+	.	ID=FBgn0044020.1.mrna1;geneID=FBgn0044020.1.path1;Name=FBgn0044020.1;Dir=sensecoverage=99.7;identity=99.2;matches=368;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016818
Chr2	stalkie_big_nohaplotig	exon	41553044	41553235	98	+	.	Parent=FBgn0044020.1.mrna1;Target=FBgn0044020.1 2 193 +
Chr2	stalkie_big_nohaplotig	exon	41604203	41604381	99	+	.	Parent=FBgn0044020.1.mrna1;Target=FBgn0044020.1 194 372 +
Chr2	stalkie_big_nohaplotig	CDS	41553046	41553235	.	+	0	Parent=FBgn0044020.1.mrna1;Target=FBgn0044020.1 4 193 +
Chr2	stalkie_big_nohaplotig	CDS	41604203	41604381	.	+	2	Parent=FBgn0044020.1.mrna1;Target=FBgn0044020.1 194 372 +
Chr2	gffcl	locus	41599268	41704566	.	-	.	ID=RLOC_00016819;geneIDs=comp148861_c0_seq1.path1;transcripts=comp148861_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41599268	41704566	.	-	.	ID=comp148861_c0_seq1.mrna1;geneID=comp148861_c0_seq1.path1;Name=comp148861_c0_seq1;Dir=antisensecoverage=92.8;identity=98.4;matches=555;mismatches=9;indels=0;unknowns=0;locus=RLOC_00016819
Chr2	stalkie_big_nohaplotig	exon	41599268	41599349	100	-	.	Parent=comp148861_c0_seq1.mrna1;Target=comp148861_c0_seq1 40 121 -
Chr2	stalkie_big_nohaplotig	exon	41703955	41704167	98	-	.	Parent=comp148861_c0_seq1.mrna1;Target=comp148861_c0_seq1 123 335 -
Chr2	stalkie_big_nohaplotig	exon	41704220	41704338	96	-	.	Parent=comp148861_c0_seq1.mrna1;Target=comp148861_c0_seq1 336 454 -
Chr2	stalkie_big_nohaplotig	exon	41704417	41704566	99	-	.	Parent=comp148861_c0_seq1.mrna1;Target=comp148861_c0_seq1 455 604 -
Chr2	stalkie_big_nohaplotig	CDS	41704027	41704167	.	-	0	Parent=comp148861_c0_seq1.mrna1;Target=comp148861_c0_seq1 195 335 .
Chr2	stalkie_big_nohaplotig	CDS	41704220	41704338	.	-	2	Parent=comp148861_c0_seq1.mrna1;Target=comp148861_c0_seq1 336 454 .
Chr2	stalkie_big_nohaplotig	CDS	41704417	41704429	.	-	0	Parent=comp148861_c0_seq1.mrna1;Target=comp148861_c0_seq1 455 467 .
Chr2	gffcl	locus	41599495	41599987	.	-	.	ID=RLOC_00016820;geneIDs=comp148672_c0_seq1.path1;transcripts=comp148672_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41599495	41599987	.	-	.	ID=comp148672_c0_seq1.mrna1;geneID=comp148672_c0_seq1.path1;Name=comp148672_c0_seq1;Dir=sensecoverage=97.1;identity=98.3;matches=356;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016820
Chr2	stalkie_big_nohaplotig	exon	41599495	41599580	97	-	.	Parent=comp148672_c0_seq1.mrna1;Target=comp148672_c0_seq1 288 373 +
Chr2	stalkie_big_nohaplotig	exon	41599639	41599757	99	-	.	Parent=comp148672_c0_seq1.mrna1;Target=comp148672_c0_seq1 169 287 +
Chr2	stalkie_big_nohaplotig	exon	41599831	41599987	98	-	.	Parent=comp148672_c0_seq1.mrna1;Target=comp148672_c0_seq1 12 168 +
Chr2	stalkie_big_nohaplotig	CDS	41599497	41599580	.	-	0	Parent=comp148672_c0_seq1.mrna1;Target=comp148672_c0_seq1 288 371 +
Chr2	stalkie_big_nohaplotig	CDS	41599639	41599757	.	-	2	Parent=comp148672_c0_seq1.mrna1;Target=comp148672_c0_seq1 169 287 +
Chr2	stalkie_big_nohaplotig	CDS	41599831	41599843	.	-	0	Parent=comp148672_c0_seq1.mrna1;Target=comp148672_c0_seq1 156 168 +
Chr2	gffcl	locus	41642268	41645104	.	+	.	ID=RLOC_00016821;geneIDs=FBgn0086445.1.path1;transcripts=FBgn0086445.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41642268	41645104	.	+	.	ID=FBgn0086445.1.mrna1;geneID=FBgn0086445.1.path1;Name=FBgn0086445.1;Dir=sensecoverage=100.0;identity=99.5;matches=1453;mismatches=8;indels=0;unknowns=0;locus=RLOC_00016821
Chr2	stalkie_big_nohaplotig	exon	41642268	41642426	100	+	.	Parent=FBgn0086445.1.mrna1;Target=FBgn0086445.1 1 159 +
Chr2	stalkie_big_nohaplotig	exon	41643003	41643204	100	+	.	Parent=FBgn0086445.1.mrna1;Target=FBgn0086445.1 160 361 +
Chr2	stalkie_big_nohaplotig	exon	41643273	41643381	100	+	.	Parent=FBgn0086445.1.mrna1;Target=FBgn0086445.1 362 470 +
Chr2	stalkie_big_nohaplotig	exon	41643459	41643717	100	+	.	Parent=FBgn0086445.1.mrna1;Target=FBgn0086445.1 471 729 +
Chr2	stalkie_big_nohaplotig	exon	41643777	41644004	99	+	.	Parent=FBgn0086445.1.mrna1;Target=FBgn0086445.1 730 957 +
Chr2	stalkie_big_nohaplotig	exon	41644060	41644224	100	+	.	Parent=FBgn0086445.1.mrna1;Target=FBgn0086445.1 958 1122 +
Chr2	stalkie_big_nohaplotig	exon	41644284	41644481	97	+	.	Parent=FBgn0086445.1.mrna1;Target=FBgn0086445.1 1123 1320 +
Chr2	stalkie_big_nohaplotig	exon	41644964	41645104	99	+	.	Parent=FBgn0086445.1.mrna1;Target=FBgn0086445.1 1321 1461 +
Chr2	stalkie_big_nohaplotig	CDS	41642268	41642426	.	+	0	Parent=FBgn0086445.1.mrna1;Target=FBgn0086445.1 1 159 +
Chr2	stalkie_big_nohaplotig	CDS	41643003	41643204	.	+	0	Parent=FBgn0086445.1.mrna1;Target=FBgn0086445.1 160 361 +
Chr2	stalkie_big_nohaplotig	CDS	41643273	41643381	.	+	2	Parent=FBgn0086445.1.mrna1;Target=FBgn0086445.1 362 470 +
Chr2	stalkie_big_nohaplotig	CDS	41643459	41643717	.	+	1	Parent=FBgn0086445.1.mrna1;Target=FBgn0086445.1 471 729 +
Chr2	stalkie_big_nohaplotig	CDS	41643777	41644004	.	+	0	Parent=FBgn0086445.1.mrna1;Target=FBgn0086445.1 730 957 +
Chr2	stalkie_big_nohaplotig	CDS	41644060	41644224	.	+	0	Parent=FBgn0086445.1.mrna1;Target=FBgn0086445.1 958 1122 +
Chr2	stalkie_big_nohaplotig	CDS	41644284	41644481	.	+	0	Parent=FBgn0086445.1.mrna1;Target=FBgn0086445.1 1123 1320 +
Chr2	stalkie_big_nohaplotig	CDS	41644964	41645104	.	+	0	Parent=FBgn0086445.1.mrna1;Target=FBgn0086445.1 1321 1461 +
Chr2	gffcl	locus	41647254	41651576	.	+	.	ID=RLOC_00016822;geneIDs=CPIJ003423.path6,comp163982_c2_seq1.path4;transcripts=comp163982_c2_seq1.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	41647254	41651576	.	+	.	ID=comp163982_c2_seq1.mrna4;geneID=comp163982_c2_seq1.path4;Name=comp163982_c2_seq1;Dir=indeterminatecoverage=85.0;identity=98.5;matches=3474;mismatches=26;indels=28;unknowns=0;locus=RLOC_00016822
Chr2	stalkie_big_nohaplotig	exon	41647254	41650668	99	+	.	Parent=comp163982_c2_seq1.mrna4;Target=comp163982_c2_seq1 3414 1 .
Chr2	stalkie_big_nohaplotig	exon	41651491	41651576	57	+	.	Parent=comp163982_c2_seq1.mrna4;Target=comp163982_c2_seq1 3527 3415 .
Chr2	stalkie_big_nohaplotig	CDS	41648165	41650668	.	+	0	Parent=comp163982_c2_seq1.mrna4;Target=comp163982_c2_seq1 3414 911 .
Chr2	stalkie_big_nohaplotig	CDS	41651491	41651493	.	+	1	Parent=comp163982_c2_seq1.mrna4;Target=comp163982_c2_seq1 3442 3415 .
Chr2	stalkie_big_nohaplotig	mRNA	41654124	41655166	.	+	.	ID=comp149072_c0_seq1.mrna1;geneID=comp149072_c0_seq1.path1;Name=comp149072_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.3;matches=953;mismatches=54;indels=37;unknowns=0;Target=comp149072_c0_seq1 1008 1 .;CDS_Target=comp149072_c0_seq1 508 452 .;locus=RLOC_00016823
Chr2	stalkie_big_nohaplotig	exon	41654124	41655166	91	+	.	Parent=comp149072_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	41654599	41654657	.	+	0	Parent=comp149072_c0_seq1.mrna1
Chr2	gffcl	locus	41668893	41671546	.	-	.	ID=RLOC_00016824;geneIDs=FBgn0010470.1.path2;transcripts=FBgn0010470.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	41668893	41671546	.	-	.	ID=FBgn0010470.1.mrna2;geneID=FBgn0010470.1.path2;Name=FBgn0010470.1;Dir=sensecoverage=66.7;identity=99.6;matches=452;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016824
Chr2	stalkie_big_nohaplotig	exon	41668893	41669069	99	-	.	Parent=FBgn0010470.1.mrna2;Target=FBgn0010470.1 505 681 +
Chr2	stalkie_big_nohaplotig	exon	41671190	41671377	99	-	.	Parent=FBgn0010470.1.mrna2;Target=FBgn0010470.1 317 504 +
Chr2	stalkie_big_nohaplotig	exon	41671458	41671546	100	-	.	Parent=FBgn0010470.1.mrna2;Target=FBgn0010470.1 228 316 +
Chr2	stalkie_big_nohaplotig	CDS	41668893	41669069	.	-	1	Parent=FBgn0010470.1.mrna2;Target=FBgn0010470.1 505 681 +
Chr2	stalkie_big_nohaplotig	CDS	41671190	41671377	.	-	0	Parent=FBgn0010470.1.mrna2;Target=FBgn0010470.1 317 504 +
Chr2	stalkie_big_nohaplotig	CDS	41671458	41671546	.	-	2	Parent=FBgn0010470.1.mrna2;Target=FBgn0010470.1 228 316 +
Chr2	gffcl	locus	41718515	41722736	.	+	.	ID=RLOC_00016826;geneIDs=FBgn0033784.1.path1;transcripts=FBgn0033784.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41718515	41722736	.	+	.	ID=FBgn0033784.1.mrna1;geneID=FBgn0033784.1.path1;Name=FBgn0033784.1;Dir=sensecoverage=100.0;identity=100.0;matches=1062;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016826
Chr2	stalkie_big_nohaplotig	exon	41718515	41718752	100	+	.	Parent=FBgn0033784.1.mrna1;Target=FBgn0033784.1 1 238 +
Chr2	stalkie_big_nohaplotig	exon	41718827	41718961	100	+	.	Parent=FBgn0033784.1.mrna1;Target=FBgn0033784.1 239 373 +
Chr2	stalkie_big_nohaplotig	exon	41721979	41722306	100	+	.	Parent=FBgn0033784.1.mrna1;Target=FBgn0033784.1 374 701 +
Chr2	stalkie_big_nohaplotig	exon	41722376	41722736	100	+	.	Parent=FBgn0033784.1.mrna1;Target=FBgn0033784.1 702 1062 +
Chr2	stalkie_big_nohaplotig	CDS	41718515	41718752	.	+	0	Parent=FBgn0033784.1.mrna1;Target=FBgn0033784.1 1 238 +
Chr2	stalkie_big_nohaplotig	CDS	41718827	41718961	.	+	2	Parent=FBgn0033784.1.mrna1;Target=FBgn0033784.1 239 373 +
Chr2	stalkie_big_nohaplotig	CDS	41721979	41722306	.	+	2	Parent=FBgn0033784.1.mrna1;Target=FBgn0033784.1 374 701 +
Chr2	stalkie_big_nohaplotig	CDS	41722376	41722736	.	+	1	Parent=FBgn0033784.1.mrna1;Target=FBgn0033784.1 702 1062 +
Chr2	gffcl	locus	41722873	41723704	.	+	.	ID=RLOC_00016827;geneIDs=comp150350_c0_seq1.path1;transcripts=comp150350_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41722873	41723704	.	+	.	ID=comp150350_c0_seq1.mrna1;geneID=comp150350_c0_seq1.path1;Name=comp150350_c0_seq1;Dir=indeterminatecoverage=93.1;identity=94.8;matches=789;mismatches=6;indels=37;unknowns=0;Target=comp150350_c0_seq1 854 60 .;CDS_Target=comp150350_c0_seq1 382 197 .;locus=RLOC_00016827
Chr2	stalkie_big_nohaplotig	exon	41722873	41723704	94	+	.	Parent=comp150350_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	41723047	41723232	.	+	0	Parent=comp150350_c0_seq1.mrna1
Chr2	gffcl	locus	41732815	41739690	.	-	.	ID=RLOC_00016829;geneIDs=FBgn0033782.1.path1;transcripts=FBgn0033782.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41732815	41739690	.	-	.	ID=FBgn0033782.1.mrna1;geneID=FBgn0033782.1.path1;Name=FBgn0033782.1;Dir=sensecoverage=100.0;identity=99.3;matches=1216;mismatches=8;indels=0;unknowns=0;locus=RLOC_00016829
Chr2	stalkie_big_nohaplotig	exon	41732815	41733306	98	-	.	Parent=FBgn0033782.1.mrna1;Target=FBgn0033782.1 733 1224 +
Chr2	stalkie_big_nohaplotig	exon	41733533	41733878	100	-	.	Parent=FBgn0033782.1.mrna1;Target=FBgn0033782.1 387 732 +
Chr2	stalkie_big_nohaplotig	exon	41739305	41739690	99	-	.	Parent=FBgn0033782.1.mrna1;Target=FBgn0033782.1 1 386 +
Chr2	stalkie_big_nohaplotig	CDS	41732815	41733306	.	-	0	Parent=FBgn0033782.1.mrna1;Target=FBgn0033782.1 733 1224 +
Chr2	stalkie_big_nohaplotig	CDS	41733533	41733878	.	-	1	Parent=FBgn0033782.1.mrna1;Target=FBgn0033782.1 387 732 +
Chr2	stalkie_big_nohaplotig	CDS	41739305	41739690	.	-	0	Parent=FBgn0033782.1.mrna1;Target=FBgn0033782.1 1 386 +
Chr2	gffcl	locus	41751559	41752516	.	+	.	ID=RLOC_00016830;geneIDs=comp152191_c0_seq1.path1;transcripts=comp152191_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41751559	41752516	.	+	.	ID=comp152191_c0_seq1.mrna1;geneID=comp152191_c0_seq1.path1;Name=comp152191_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=940;mismatches=18;indels=0;unknowns=0;Target=comp152191_c0_seq1 958 1 .;CDS_Target=comp152191_c0_seq1 308 150 .;locus=RLOC_00016830
Chr2	stalkie_big_nohaplotig	exon	41751559	41752516	98	+	.	Parent=comp152191_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	41751708	41751866	.	+	0	Parent=comp152191_c0_seq1.mrna1
Chr2	gffcl	locus	41773062	41774399	.	-	.	ID=RLOC_00016831;geneIDs=comp149622_c0_seq1.path1;transcripts=comp149622_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41773062	41774399	.	-	.	ID=comp149622_c0_seq1.mrna1;geneID=comp149622_c0_seq1.path1;Name=comp149622_c0_seq1;Dir=antisensecoverage=100.0;identity=95.7;matches=1192;mismatches=14;indels=40;unknowns=0;Target=comp149622_c0_seq1 970 1206 .;locus=RLOC_00016831
Chr2	stalkie_big_nohaplotig	exon	41773062	41773468	99	-	.	Parent=comp149622_c0_seq1.mrna1;Target=comp149622_c0_seq1 1 407 -
Chr2	stalkie_big_nohaplotig	exon	41773561	41774399	93	-	.	Parent=comp149622_c0_seq1.mrna1;Target=comp149622_c0_seq1 408 1206 -
Chr2	stalkie_big_nohaplotig	CDS	41774159	41774399	.	-	0	Parent=comp149622_c0_seq1.mrna1
Chr2	gffcl	locus	41775205	41776230	.	-	.	ID=RLOC_00016832;geneIDs=comp143191_c0_seq1.path1;transcripts=comp143191_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41775205	41776230	.	-	.	ID=comp143191_c0_seq1.mrna1;geneID=comp143191_c0_seq1.path1;Name=comp143191_c0_seq1;Dir=sensecoverage=52.4;identity=98.8;matches=814;mismatches=8;indels=2;unknowns=0;locus=RLOC_00016832
Chr2	stalkie_big_nohaplotig	exon	41775205	41775337	100	-	.	Parent=comp143191_c0_seq1.mrna1;Target=comp143191_c0_seq1 697 829 +
Chr2	stalkie_big_nohaplotig	exon	41775418	41775749	98	-	.	Parent=comp143191_c0_seq1.mrna1;Target=comp143191_c0_seq1 363 696 +
Chr2	stalkie_big_nohaplotig	exon	41775874	41776230	98	-	.	Parent=comp143191_c0_seq1.mrna1;Target=comp143191_c0_seq1 6 362 +
Chr2	stalkie_big_nohaplotig	CDS	41775600	41775749	.	-	0	Parent=comp143191_c0_seq1.mrna1;Target=comp143191_c0_seq1 363 512 +
Chr2	stalkie_big_nohaplotig	CDS	41775874	41776125	.	-	0	Parent=comp143191_c0_seq1.mrna1;Target=comp143191_c0_seq1 111 362 +
Chr2	gffcl	locus	41809156	41810154	.	-	.	ID=RLOC_00016833;geneIDs=comp151993_c0_seq1.path1;transcripts=comp151993_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41809156	41810154	.	-	.	ID=comp151993_c0_seq1.mrna1;geneID=comp151993_c0_seq1.path1;Name=comp151993_c0_seq1;Dir=indeterminatecoverage=98.8;identity=96.0;matches=959;mismatches=34;indels=6;unknowns=0;Target=comp151993_c0_seq1 994 2 .;CDS_Target=comp151993_c0_seq1 490 413 .;locus=RLOC_00016833
Chr2	stalkie_big_nohaplotig	exon	41809156	41810154	95	-	.	Parent=comp151993_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	41809666	41809743	.	-	0	Parent=comp151993_c0_seq1.mrna1
Chr2	gffcl	locus	41810598	41838739	.	-	.	ID=RLOC_00016834;geneIDs=FBgn0003975.1.path1;transcripts=FBgn0003975.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41810598	41838739	.	-	.	ID=FBgn0003975.1.mrna1;geneID=FBgn0003975.1.path1;Name=FBgn0003975.1;Dir=sensecoverage=100.0;identity=100.0;matches=1047;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016834
Chr2	stalkie_big_nohaplotig	exon	41810598	41810644	100	-	.	Parent=FBgn0003975.1.mrna1;Target=FBgn0003975.1 1001 1047 +
Chr2	stalkie_big_nohaplotig	exon	41811992	41812065	100	-	.	Parent=FBgn0003975.1.mrna1;Target=FBgn0003975.1 927 1000 +
Chr2	stalkie_big_nohaplotig	exon	41812252	41812427	100	-	.	Parent=FBgn0003975.1.mrna1;Target=FBgn0003975.1 751 926 +
Chr2	stalkie_big_nohaplotig	exon	41812563	41812654	100	-	.	Parent=FBgn0003975.1.mrna1;Target=FBgn0003975.1 659 750 +
Chr2	stalkie_big_nohaplotig	exon	41823389	41823628	100	-	.	Parent=FBgn0003975.1.mrna1;Target=FBgn0003975.1 419 658 +
Chr2	stalkie_big_nohaplotig	exon	41825534	41825825	100	-	.	Parent=FBgn0003975.1.mrna1;Target=FBgn0003975.1 127 418 +
Chr2	stalkie_big_nohaplotig	exon	41838614	41838739	100	-	.	Parent=FBgn0003975.1.mrna1;Target=FBgn0003975.1 1 126 +
Chr2	stalkie_big_nohaplotig	CDS	41810598	41810644	.	-	2	Parent=FBgn0003975.1.mrna1;Target=FBgn0003975.1 1001 1047 +
Chr2	stalkie_big_nohaplotig	CDS	41811992	41812065	.	-	1	Parent=FBgn0003975.1.mrna1;Target=FBgn0003975.1 927 1000 +
Chr2	stalkie_big_nohaplotig	CDS	41812252	41812427	.	-	0	Parent=FBgn0003975.1.mrna1;Target=FBgn0003975.1 751 926 +
Chr2	stalkie_big_nohaplotig	CDS	41812563	41812654	.	-	2	Parent=FBgn0003975.1.mrna1;Target=FBgn0003975.1 659 750 +
Chr2	stalkie_big_nohaplotig	CDS	41823389	41823628	.	-	2	Parent=FBgn0003975.1.mrna1;Target=FBgn0003975.1 419 658 +
Chr2	stalkie_big_nohaplotig	CDS	41825534	41825825	.	-	0	Parent=FBgn0003975.1.mrna1;Target=FBgn0003975.1 127 418 +
Chr2	stalkie_big_nohaplotig	CDS	41838614	41838739	.	-	0	Parent=FBgn0003975.1.mrna1;Target=FBgn0003975.1 1 126 +
Chr2	gffcl	locus	41858965	41869606	.	+	.	ID=RLOC_00016836;geneIDs=FBgn0013305.2.path1;transcripts=FBgn0013305.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41858965	41869606	.	+	.	ID=FBgn0013305.2.mrna1;geneID=FBgn0013305.2.path1;Name=FBgn0013305.2;Dir=sensecoverage=100.0;identity=99.8;matches=1000;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016836
Chr2	stalkie_big_nohaplotig	exon	41858965	41858989	100	+	.	Parent=FBgn0013305.2.mrna1;Target=FBgn0013305.2 1 25 +
Chr2	stalkie_big_nohaplotig	exon	41859684	41859719	100	+	.	Parent=FBgn0013305.2.mrna1;Target=FBgn0013305.2 26 61 +
Chr2	stalkie_big_nohaplotig	exon	41867426	41867760	100	+	.	Parent=FBgn0013305.2.mrna1;Target=FBgn0013305.2 62 396 +
Chr2	stalkie_big_nohaplotig	exon	41868930	41869178	99	+	.	Parent=FBgn0013305.2.mrna1;Target=FBgn0013305.2 397 645 +
Chr2	stalkie_big_nohaplotig	exon	41869250	41869606	100	+	.	Parent=FBgn0013305.2.mrna1;Target=FBgn0013305.2 646 1002 +
Chr2	stalkie_big_nohaplotig	CDS	41858965	41858989	.	+	0	Parent=FBgn0013305.2.mrna1;Target=FBgn0013305.2 1 25 +
Chr2	stalkie_big_nohaplotig	CDS	41859684	41859719	.	+	2	Parent=FBgn0013305.2.mrna1;Target=FBgn0013305.2 26 61 +
Chr2	stalkie_big_nohaplotig	CDS	41867426	41867760	.	+	2	Parent=FBgn0013305.2.mrna1;Target=FBgn0013305.2 62 396 +
Chr2	stalkie_big_nohaplotig	CDS	41868930	41869178	.	+	0	Parent=FBgn0013305.2.mrna1;Target=FBgn0013305.2 397 645 +
Chr2	stalkie_big_nohaplotig	CDS	41869250	41869606	.	+	0	Parent=FBgn0013305.2.mrna1;Target=FBgn0013305.2 646 1002 +
Chr2	gffcl	locus	41860125	41861180	.	+	.	ID=RLOC_00016837;geneIDs=comp160100_c3_seq1.path1;transcripts=comp160100_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41860125	41861180	.	+	.	ID=comp160100_c3_seq1.mrna1;geneID=comp160100_c3_seq1.path1;Name=comp160100_c3_seq1;Dir=indeterminatecoverage=97.3;identity=96.7;matches=1026;mismatches=20;indels=15;unknowns=0;Target=comp160100_c3_seq1 1080 30 .;CDS_Target=comp160100_c3_seq1 830 660 .;locus=RLOC_00016837
Chr2	stalkie_big_nohaplotig	exon	41860125	41861180	96	+	.	Parent=comp160100_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	41860765	41860935	.	+	0	Parent=comp160100_c3_seq1.mrna1
Chr2	gffcl	locus	41863062	41863768	.	-	.	ID=RLOC_00016838;geneIDs=comp135485_c0_seq1.path1;transcripts=comp135485_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41863062	41863768	.	-	.	ID=comp135485_c0_seq1.mrna1;geneID=comp135485_c0_seq1.path1;Name=comp135485_c0_seq1;Dir=sensecoverage=94.8;identity=97.4;matches=567;mismatches=11;indels=4;unknowns=0;locus=RLOC_00016838
Chr2	stalkie_big_nohaplotig	exon	41863062	41863337	97	-	.	Parent=comp135485_c0_seq1.mrna1;Target=comp135485_c0_seq1 318 593 +
Chr2	stalkie_big_nohaplotig	exon	41863403	41863512	96	-	.	Parent=comp135485_c0_seq1.mrna1;Target=comp135485_c0_seq1 208 317 +
Chr2	stalkie_big_nohaplotig	exon	41863575	41863768	97	-	.	Parent=comp135485_c0_seq1.mrna1;Target=comp135485_c0_seq1 14 207 +
Chr2	stalkie_big_nohaplotig	CDS	41863191	41863337	.	-	0	Parent=comp135485_c0_seq1.mrna1;Target=comp135485_c0_seq1 318 464 +
Chr2	stalkie_big_nohaplotig	CDS	41863403	41863512	.	-	2	Parent=comp135485_c0_seq1.mrna1;Target=comp135485_c0_seq1 208 317 +
Chr2	stalkie_big_nohaplotig	CDS	41863575	41863584	.	-	0	Parent=comp135485_c0_seq1.mrna1;Target=comp135485_c0_seq1 198 207 +
Chr2	gffcl	locus	41863819	41865729	.	-	.	ID=RLOC_00016839;geneIDs=comp162082_c0_seq1.path1;transcripts=comp162082_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41863819	41865729	.	-	.	ID=comp162082_c0_seq1.mrna1;geneID=comp162082_c0_seq1.path1;Name=comp162082_c0_seq1;Dir=sensecoverage=96.6;identity=85.9;matches=1737;mismatches=58;indels=228;unknowns=0;Target=comp162082_c0_seq1 1472 1714 +;locus=RLOC_00016839
Chr2	stalkie_big_nohaplotig	exon	41863819	41863945	93	-	.	Parent=comp162082_c0_seq1.mrna1;Target=comp162082_c0_seq1 1937 2063 +
Chr2	stalkie_big_nohaplotig	exon	41864007	41864617	95	-	.	Parent=comp162082_c0_seq1.mrna1;Target=comp162082_c0_seq1 1320 1936 +
Chr2	stalkie_big_nohaplotig	exon	41864673	41865729	80	-	.	Parent=comp162082_c0_seq1.mrna1;Target=comp162082_c0_seq1 41 1319 +
Chr2	stalkie_big_nohaplotig	CDS	41864224	41864465	.	-	0	Parent=comp162082_c0_seq1.mrna1
Chr2	gffcl	locus	41866820	41867148	.	-	.	ID=RLOC_00016840;geneIDs=comp90989_c0_seq1.path1;transcripts=comp90989_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41866820	41867148	.	-	.	ID=comp90989_c0_seq1.mrna1;geneID=comp90989_c0_seq1.path1;Name=comp90989_c0_seq1;Dir=indeterminatecoverage=97.9;identity=99.4;matches=327;mismatches=2;indels=0;unknowns=0;Target=comp90989_c0_seq1 336 8 .;CDS_Target=comp90989_c0_seq1 89 9 .;locus=RLOC_00016840
Chr2	stalkie_big_nohaplotig	exon	41866820	41867148	99	-	.	Parent=comp90989_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	41867067	41867147	.	-	0	Parent=comp90989_c0_seq1.mrna1
Chr2	gffcl	locus	41868114	41868666	.	-	.	ID=RLOC_00016841;geneIDs=comp155743_c0_seq1.path1;transcripts=comp155743_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41868114	41868666	.	-	.	ID=comp155743_c0_seq1.mrna1;geneID=comp155743_c0_seq1.path1;Name=comp155743_c0_seq1;Dir=indeterminatecoverage=97.7;identity=96.9;matches=536;mismatches=7;indels=10;unknowns=0;Target=comp155743_c0_seq1 543 1 .;CDS_Target=comp155743_c0_seq1 168 55 .;locus=RLOC_00016841
Chr2	stalkie_big_nohaplotig	exon	41868114	41868666	96	-	.	Parent=comp155743_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	41868499	41868612	.	-	0	Parent=comp155743_c0_seq1.mrna1
Chr2	gffcl	locus	41873144	41873990	.	+	.	ID=RLOC_00016842;geneIDs=FBgn0013305.3.path1;transcripts=FBgn0013305.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41873144	41873990	.	+	.	ID=FBgn0013305.3.mrna1;geneID=FBgn0013305.3.path1;Name=FBgn0013305.3;Dir=sensecoverage=100.0;identity=99.4;matches=722;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016842
Chr2	stalkie_big_nohaplotig	exon	41873144	41873263	99	+	.	Parent=FBgn0013305.3.mrna1;Target=FBgn0013305.3 1 120 +
Chr2	stalkie_big_nohaplotig	exon	41873328	41873576	99	+	.	Parent=FBgn0013305.3.mrna1;Target=FBgn0013305.3 121 369 +
Chr2	stalkie_big_nohaplotig	exon	41873634	41873990	99	+	.	Parent=FBgn0013305.3.mrna1;Target=FBgn0013305.3 370 726 +
Chr2	stalkie_big_nohaplotig	CDS	41873144	41873263	.	+	0	Parent=FBgn0013305.3.mrna1;Target=FBgn0013305.3 1 120 +
Chr2	stalkie_big_nohaplotig	CDS	41873328	41873576	.	+	0	Parent=FBgn0013305.3.mrna1;Target=FBgn0013305.3 121 369 +
Chr2	stalkie_big_nohaplotig	CDS	41873634	41873990	.	+	0	Parent=FBgn0013305.3.mrna1;Target=FBgn0013305.3 370 726 +
Chr2	gffcl	locus	41877982	41879316	.	+	.	ID=RLOC_00016843;geneIDs=FBgn0033786.2.path2;transcripts=FBgn0033786.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	41877982	41879316	.	+	.	ID=FBgn0033786.2.mrna2;geneID=FBgn0033786.2.path2;Name=FBgn0033786.2;Dir=indeterminatecoverage=98.5;identity=99.6;matches=1329;mismatches=6;indels=0;unknowns=0;Target=FBgn0033786.2 1356 22 .;locus=RLOC_00016843
Chr2	stalkie_big_nohaplotig	exon	41877982	41879316	99	+	.	Parent=FBgn0033786.2.mrna2
Chr2	stalkie_big_nohaplotig	CDS	41877982	41879316	.	+	0	Parent=FBgn0033786.2.mrna2
Chr2	gffcl	locus	41884345	41885320	.	-	.	ID=RLOC_00016844;geneIDs=comp156369_c0_seq1.path1;transcripts=comp156369_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41884345	41885320	.	-	.	ID=comp156369_c0_seq1.mrna1;geneID=comp156369_c0_seq1.path1;Name=comp156369_c0_seq1;Dir=sensecoverage=69.8;identity=94.7;matches=864;mismatches=29;indels=19;unknowns=0;Target=comp156369_c0_seq1 47 76 +;locus=RLOC_00016844
Chr2	stalkie_big_nohaplotig	exon	41884345	41884749	91	-	.	Parent=comp156369_c0_seq1.mrna1;Target=comp156369_c0_seq1 489 912 +
Chr2	stalkie_big_nohaplotig	exon	41884833	41885320	97	-	.	Parent=comp156369_c0_seq1.mrna1;Target=comp156369_c0_seq1 1 488 +
Chr2	stalkie_big_nohaplotig	CDS	41885245	41885274	.	-	0	Parent=comp156369_c0_seq1.mrna1
Chr2	gffcl	locus	41890095	41890703	.	-	.	ID=RLOC_00016845;geneIDs=comp154151_c0_seq1.path1;transcripts=comp154151_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41890095	41890703	.	-	.	ID=comp154151_c0_seq1.mrna1;geneID=comp154151_c0_seq1.path1;Name=comp154151_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.5;matches=601;mismatches=8;indels=14;unknowns=0;Target=comp154151_c0_seq1 623 1 .;CDS_Target=comp154151_c0_seq1 117 1 .;locus=RLOC_00016845
Chr2	stalkie_big_nohaplotig	exon	41890095	41890703	96	-	.	Parent=comp154151_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	41890587	41890703	.	-	0	Parent=comp154151_c0_seq1.mrna1
Chr2	gffcl	locus	41894789	41895141	.	+	.	ID=RLOC_00016846;geneIDs=comp70944_c0_seq1.path2;transcripts=comp70944_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	41894789	41895141	.	+	.	ID=comp70944_c0_seq1.mrna2;geneID=comp70944_c0_seq1.path2;Name=comp70944_c0_seq1;Dir=indeterminatecoverage=98.6;identity=95.3;matches=306;mismatches=15;indels=0;unknowns=0;Target=comp70944_c0_seq1 270 202 .;locus=RLOC_00016846
Chr2	stalkie_big_nohaplotig	exon	41894789	41894939	92	+	.	Parent=comp70944_c0_seq1.mrna2;Target=comp70944_c0_seq1 156 6 .
Chr2	stalkie_big_nohaplotig	exon	41894972	41895141	97	+	.	Parent=comp70944_c0_seq1.mrna2;Target=comp70944_c0_seq1 347 178 .
Chr2	stalkie_big_nohaplotig	CDS	41894996	41895064	.	+	0	Parent=comp70944_c0_seq1.mrna2
Chr2	gffcl	locus	41911583	41911637	.	+	.	ID=RLOC_00016847;geneIDs=comp144729_c0_seq1.path1;transcripts=comp144729_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41911583	41911637	.	+	.	ID=comp144729_c0_seq1.mrna1;geneID=comp144729_c0_seq1.path1;Name=comp144729_c0_seq1;Dir=indeterminatecoverage=13.6;identity=96.4;matches=53;mismatches=2;indels=0;unknowns=0;Target=comp144729_c0_seq1 69 15 .;locus=RLOC_00016847
Chr2	stalkie_big_nohaplotig	exon	41911583	41911637	96	+	.	Parent=comp144729_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	41911583	41911637	.	+	0	Parent=comp144729_c0_seq1.mrna1
Chr2	gffcl	locus	41915050	41917920	.	+	.	ID=RLOC_00016848;geneIDs=comp152875_c0_seq1.path1;transcripts=comp152875_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41915050	41917920	.	+	.	ID=comp152875_c0_seq1.mrna1;geneID=comp152875_c0_seq1.path1;Name=comp152875_c0_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=427;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016848
Chr2	stalkie_big_nohaplotig	exon	41915050	41915287	99	+	.	Parent=comp152875_c0_seq1.mrna1;Target=comp152875_c0_seq1 193 430 -
Chr2	stalkie_big_nohaplotig	exon	41916219	41916279	100	+	.	Parent=comp152875_c0_seq1.mrna1;Target=comp152875_c0_seq1 132 192 -
Chr2	stalkie_big_nohaplotig	exon	41917790	41917920	99	+	.	Parent=comp152875_c0_seq1.mrna1;Target=comp152875_c0_seq1 1 131 -
Chr2	stalkie_big_nohaplotig	CDS	41915154	41915287	.	+	0	Parent=comp152875_c0_seq1.mrna1;Target=comp152875_c0_seq1 193 326 .
Chr2	stalkie_big_nohaplotig	CDS	41916219	41916279	.	+	1	Parent=comp152875_c0_seq1.mrna1;Target=comp152875_c0_seq1 132 192 .
Chr2	stalkie_big_nohaplotig	CDS	41917790	41917918	.	+	0	Parent=comp152875_c0_seq1.mrna1;Target=comp152875_c0_seq1 3 131 .
Chr2	gffcl	locus	41945185	42005244	.	-	.	ID=RLOC_00016849;geneIDs=FBgn0004512.1.path1,comp146793_c0_seq1.path1,comp150787_c0_seq1.path1,comp153667_c1_seq1.path1,comp158247_c0_seq1.path1;transcripts=FBgn0004512.1.mrna1,comp146793_c0_seq1.mrna1,comp158247_c0_seq1.mrna1,comp153667_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41946070	42005244	.	-	.	ID=FBgn0004512.1.mrna1;geneID=FBgn0004512.1.path1;Name=FBgn0004512.1;Dir=sensecoverage=100.0;identity=89.3;matches=3443;mismatches=327;indels=86;unknowns=0;locus=RLOC_00016849
Chr2	stalkie_big_nohaplotig	exon	41946070	41947027	83	-	.	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 3088 3990 +
Chr2	stalkie_big_nohaplotig	exon	41947123	41947535	75	-	.	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 2635 3047 +
Chr2	stalkie_big_nohaplotig	exon	41947593	41947752	75	-	.	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 2475 2634 +
Chr2	stalkie_big_nohaplotig	exon	41947931	41947938	100	-	.	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 2360 2367 +
Chr2	stalkie_big_nohaplotig	exon	41947959	41948061	66	-	.	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 2225 2358 +
Chr2	stalkie_big_nohaplotig	exon	41948064	41948159	31	-	.	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 2105 2200 +
Chr2	stalkie_big_nohaplotig	exon	41948485	41948512	96	-	.	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 2059 2086 +
Chr2	stalkie_big_nohaplotig	exon	41961695	41961697	100	-	.	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 2056 2058 +
Chr2	stalkie_big_nohaplotig	exon	41964697	41964710	100	-	.	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 2042 2055 +
Chr2	stalkie_big_nohaplotig	exon	42001151	42002517	99	-	.	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 675 2041 +
Chr2	stalkie_big_nohaplotig	exon	42002581	42002681	98	-	.	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 574 674 +
Chr2	stalkie_big_nohaplotig	exon	42002767	42002911	100	-	.	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 429 573 +
Chr2	stalkie_big_nohaplotig	exon	42002986	42003179	100	-	.	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 235 428 +
Chr2	stalkie_big_nohaplotig	exon	42004320	42004380	98	-	.	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 174 234 +
Chr2	stalkie_big_nohaplotig	exon	42005072	42005244	99	-	.	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 1 173 +
Chr2	stalkie_big_nohaplotig	CDS	41946070	41947027	.	-	2	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 3088 3990 +
Chr2	stalkie_big_nohaplotig	CDS	41947123	41947535	.	-	1	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 2635 3047 +
Chr2	stalkie_big_nohaplotig	CDS	41947593	41947752	.	-	2	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 2475 2634 +
Chr2	stalkie_big_nohaplotig	CDS	41947931	41947938	.	-	1	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 2360 2367 +
Chr2	stalkie_big_nohaplotig	CDS	41947959	41948061	.	-	2	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 2225 2358 +
Chr2	stalkie_big_nohaplotig	CDS	41948064	41948159	.	-	2	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 2105 2200 +
Chr2	stalkie_big_nohaplotig	CDS	41948485	41948512	.	-	0	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 2059 2086 +
Chr2	stalkie_big_nohaplotig	CDS	41961695	41961697	.	-	0	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 2056 2058 +
Chr2	stalkie_big_nohaplotig	CDS	41964697	41964710	.	-	2	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 2042 2055 +
Chr2	stalkie_big_nohaplotig	CDS	42001151	42002517	.	-	1	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 675 2041 +
Chr2	stalkie_big_nohaplotig	CDS	42002581	42002681	.	-	0	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 574 674 +
Chr2	stalkie_big_nohaplotig	CDS	42002767	42002911	.	-	1	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 429 573 +
Chr2	stalkie_big_nohaplotig	CDS	42002986	42003179	.	-	0	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 235 428 +
Chr2	stalkie_big_nohaplotig	CDS	42004320	42004380	.	-	1	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 174 234 +
Chr2	stalkie_big_nohaplotig	CDS	42005072	42005244	.	-	0	Parent=FBgn0004512.1.mrna1;Target=FBgn0004512.1 1 173 +
Chr2	stalkie_big_nohaplotig	mRNA	41947721	41948651	.	-	.	ID=comp146793_c0_seq1.mrna1;geneID=comp146793_c0_seq1.path1;Name=comp146793_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=583;mismatches=1;indels=1;unknowns=0;locus=RLOC_00016849
Chr2	stalkie_big_nohaplotig	exon	41947721	41947859	100	-	.	Parent=comp146793_c0_seq1.mrna1;Target=comp146793_c0_seq1 447 585 +
Chr2	stalkie_big_nohaplotig	exon	41947919	41948085	99	-	.	Parent=comp146793_c0_seq1.mrna1;Target=comp146793_c0_seq1 279 446 +
Chr2	stalkie_big_nohaplotig	exon	41948374	41948651	99	-	.	Parent=comp146793_c0_seq1.mrna1;Target=comp146793_c0_seq1 1 278 +
Chr2	stalkie_big_nohaplotig	CDS	41947929	41948085	.	-	2	Parent=comp146793_c0_seq1.mrna1;Target=comp146793_c0_seq1 279 436 +
Chr2	stalkie_big_nohaplotig	CDS	41948374	41948650	.	-	0	Parent=comp146793_c0_seq1.mrna1;Target=comp146793_c0_seq1 2 278 +
Chr2	stalkie_big_nohaplotig	mRNA	41962967	42001166	.	-	.	ID=comp158247_c0_seq1.mrna1;geneID=comp158247_c0_seq1.path1;Name=comp158247_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=1492;mismatches=8;indels=0;unknowns=0;locus=RLOC_00016849
Chr2	stalkie_big_nohaplotig	exon	41962967	41963141	99	-	.	Parent=comp158247_c0_seq1.mrna1;Target=comp158247_c0_seq1 1 175 -
Chr2	stalkie_big_nohaplotig	exon	41963196	41963284	100	-	.	Parent=comp158247_c0_seq1.mrna1;Target=comp158247_c0_seq1 176 264 -
Chr2	stalkie_big_nohaplotig	exon	41975041	41975259	100	-	.	Parent=comp158247_c0_seq1.mrna1;Target=comp158247_c0_seq1 265 483 -
Chr2	stalkie_big_nohaplotig	exon	41987046	41987402	98	-	.	Parent=comp158247_c0_seq1.mrna1;Target=comp158247_c0_seq1 484 840 -
Chr2	stalkie_big_nohaplotig	exon	41999405	41999892	100	-	.	Parent=comp158247_c0_seq1.mrna1;Target=comp158247_c0_seq1 841 1328 -
Chr2	stalkie_big_nohaplotig	exon	42000995	42001166	99	-	.	Parent=comp158247_c0_seq1.mrna1;Target=comp158247_c0_seq1 1329 1500 -
Chr2	stalkie_big_nohaplotig	CDS	41975077	41975259	.	-	0	Parent=comp158247_c0_seq1.mrna1;Target=comp158247_c0_seq1 301 483 .
Chr2	stalkie_big_nohaplotig	CDS	41987046	41987402	.	-	0	Parent=comp158247_c0_seq1.mrna1;Target=comp158247_c0_seq1 484 840 .
Chr2	stalkie_big_nohaplotig	CDS	41999405	41999665	.	-	0	Parent=comp158247_c0_seq1.mrna1;Target=comp158247_c0_seq1 841 1101 .
Chr2	stalkie_big_nohaplotig	mRNA	41964038	41964701	.	-	.	ID=comp153667_c1_seq1.mrna1;geneID=comp153667_c1_seq1.path1;Name=comp153667_c1_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=519;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016849
Chr2	stalkie_big_nohaplotig	exon	41964038	41964411	99	-	.	Parent=comp153667_c1_seq1.mrna1;Target=comp153667_c1_seq1 1 374 -
Chr2	stalkie_big_nohaplotig	exon	41964555	41964701	100	-	.	Parent=comp153667_c1_seq1.mrna1;Target=comp153667_c1_seq1 375 521 -
Chr2	stalkie_big_nohaplotig	CDS	41964221	41964411	.	-	2	Parent=comp153667_c1_seq1.mrna1;Target=comp153667_c1_seq1 184 374 .
Chr2	stalkie_big_nohaplotig	CDS	41964555	41964699	.	-	0	Parent=comp153667_c1_seq1.mrna1;Target=comp153667_c1_seq1 375 519 .
Chr2	gffcl	locus	41950006	41950276	.	-	.	ID=RLOC_00016850;geneIDs=comp135043_c0_seq1.path1;transcripts=comp135043_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41950006	41950276	.	-	.	ID=comp135043_c0_seq1.mrna1;geneID=comp135043_c0_seq1.path1;Name=comp135043_c0_seq1;Dir=antisensecoverage=70.6;identity=93.9;matches=201;mismatches=13;indels=0;unknowns=0;locus=RLOC_00016850
Chr2	stalkie_big_nohaplotig	exon	41950006	41950065	100	-	.	Parent=comp135043_c0_seq1.mrna1;Target=comp135043_c0_seq1 1 60 -
Chr2	stalkie_big_nohaplotig	exon	41950123	41950276	91	-	.	Parent=comp135043_c0_seq1.mrna1;Target=comp135043_c0_seq1 61 214 -
Chr2	stalkie_big_nohaplotig	CDS	41950006	41950065	.	-	0	Parent=comp135043_c0_seq1.mrna1;Target=comp135043_c0_seq1 1 60 .
Chr2	stalkie_big_nohaplotig	CDS	41950123	41950275	.	-	0	Parent=comp135043_c0_seq1.mrna1;Target=comp135043_c0_seq1 61 213 .
Chr2	gffcl	locus	41955187	41955622	.	-	.	ID=RLOC_00016851;geneIDs=comp143530_c0_seq1.path1;transcripts=comp143530_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41955187	41955622	.	-	.	ID=comp143530_c0_seq1.mrna1;geneID=comp143530_c0_seq1.path1;Name=comp143530_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.3;matches=420;mismatches=13;indels=3;unknowns=0;Target=comp143530_c0_seq1 433 1 .;CDS_Target=comp143530_c0_seq1 252 127 .;locus=RLOC_00016851
Chr2	stalkie_big_nohaplotig	exon	41955187	41955622	96	-	.	Parent=comp143530_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	41955368	41955496	.	-	0	Parent=comp143530_c0_seq1.mrna1
Chr2	gffcl	locus	41961756	41962456	.	+	.	ID=RLOC_00016852;geneIDs=comp131486_c0_seq1.path1;transcripts=comp131486_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41961756	41962456	.	+	.	ID=comp131486_c0_seq1.mrna1;geneID=comp131486_c0_seq1.path1;Name=comp131486_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=698;mismatches=3;indels=0;unknowns=0;Target=comp131486_c0_seq1 701 1 .;CDS_Target=comp131486_c0_seq1 281 147 .;locus=RLOC_00016852
Chr2	stalkie_big_nohaplotig	exon	41961756	41962456	99	+	.	Parent=comp131486_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	41961902	41962036	.	+	0	Parent=comp131486_c0_seq1.mrna1
Chr2	gffcl	locus	41987644	41987910	.	-	.	ID=RLOC_00016853;geneIDs=comp67811_c0_seq1.path1;transcripts=comp67811_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	41987644	41987910	.	-	.	ID=comp67811_c0_seq1.mrna1;geneID=comp67811_c0_seq1.path1;Name=comp67811_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=211;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016853
Chr2	stalkie_big_nohaplotig	exon	41987644	41987728	98	-	.	Parent=comp67811_c0_seq1.mrna1;Target=comp67811_c0_seq1 1 85 -
Chr2	stalkie_big_nohaplotig	exon	41987784	41987910	100	-	.	Parent=comp67811_c0_seq1.mrna1;Target=comp67811_c0_seq1 86 212 -
Chr2	stalkie_big_nohaplotig	CDS	41987645	41987728	.	-	0	Parent=comp67811_c0_seq1.mrna1;Target=comp67811_c0_seq1 2 85 .
Chr2	stalkie_big_nohaplotig	CDS	41987784	41987909	.	-	0	Parent=comp67811_c0_seq1.mrna1;Target=comp67811_c0_seq1 86 211 .
Chr2	gffcl	locus	42003632	42003963	.	-	.	ID=RLOC_00016854;geneIDs=comp144729_c0_seq1.path2;transcripts=comp144729_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	42003632	42003963	.	-	.	ID=comp144729_c0_seq1.mrna2;geneID=comp144729_c0_seq1.path2;Name=comp144729_c0_seq1;Dir=indeterminatecoverage=82.6;identity=92.5;matches=308;mismatches=24;indels=1;unknowns=0;Target=comp144729_c0_seq1 402 70 .;CDS_Target=comp144729_c0_seq1 77 70 .;locus=RLOC_00016854
Chr2	stalkie_big_nohaplotig	exon	42003632	42003963	92	-	.	Parent=comp144729_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	42003956	42003963	.	-	1	Parent=comp144729_c0_seq1.mrna2
Chr2	gffcl	locus	42017687	42020202	.	-	.	ID=RLOC_00016855;geneIDs=comp145095_c0_seq1.path1;transcripts=comp145095_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42017687	42020202	.	-	.	ID=comp145095_c0_seq1.mrna1;geneID=comp145095_c0_seq1.path1;Name=comp145095_c0_seq1;Dir=sensecoverage=99.3;identity=99.6;matches=530;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016855
Chr2	stalkie_big_nohaplotig	exon	42017687	42017815	100	-	.	Parent=comp145095_c0_seq1.mrna1;Target=comp145095_c0_seq1 408 536 +
Chr2	stalkie_big_nohaplotig	exon	42019686	42019912	99	-	.	Parent=comp145095_c0_seq1.mrna1;Target=comp145095_c0_seq1 181 407 +
Chr2	stalkie_big_nohaplotig	exon	42020027	42020202	100	-	.	Parent=comp145095_c0_seq1.mrna1;Target=comp145095_c0_seq1 5 180 +
Chr2	stalkie_big_nohaplotig	CDS	42017792	42017815	.	-	0	Parent=comp145095_c0_seq1.mrna1;Target=comp145095_c0_seq1 408 431 +
Chr2	stalkie_big_nohaplotig	CDS	42019686	42019718	.	-	0	Parent=comp145095_c0_seq1.mrna1;Target=comp145095_c0_seq1 375 407 +
Chr2	stalkie_big_nohaplotig	mRNA	42023863	43327972	.	-	.	ID=comp159453_c2_seq1.mrna1;geneID=comp159453_c2_seq1.path1;Name=comp159453_c2_seq1;Dir=antisensecoverage=100.0;identity=88.5;matches=2727;mismatches=281;indels=72;unknowns=0;locus=RLOC_00016856
Chr2	stalkie_big_nohaplotig	exon	42023863	42024620	99	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 1 758 -
Chr2	stalkie_big_nohaplotig	exon	42024680	42024780	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 759 859 -
Chr2	stalkie_big_nohaplotig	exon	42024865	42025009	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 860 1004 -
Chr2	stalkie_big_nohaplotig	exon	42025066	42025856	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 1005 1795 -
Chr2	stalkie_big_nohaplotig	exon	43114751	43114752	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 1796 1797 -
Chr2	stalkie_big_nohaplotig	exon	43123702	43123709	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 1798 1805 -
Chr2	stalkie_big_nohaplotig	exon	43124452	43124461	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 1821 1830 -
Chr2	stalkie_big_nohaplotig	exon	43126354	43126355	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 1833 1834 -
Chr2	stalkie_big_nohaplotig	exon	43129182	43129185	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 1835 1838 -
Chr2	stalkie_big_nohaplotig	exon	43129445	43129454	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 1839 1848 -
Chr2	stalkie_big_nohaplotig	exon	43141050	43141095	54	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 1903 1946 -
Chr2	stalkie_big_nohaplotig	exon	43143543	43143584	52	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 1947 2001 -
Chr2	stalkie_big_nohaplotig	exon	43146281	43146285	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2002 2006 -
Chr2	stalkie_big_nohaplotig	exon	43153891	43153892	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2007 2008 -
Chr2	stalkie_big_nohaplotig	exon	43154323	43154332	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2009 2018 -
Chr2	stalkie_big_nohaplotig	exon	43161507	43161549	60	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2059 2119 -
Chr2	stalkie_big_nohaplotig	exon	43175994	43176005	91	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2120 2131 -
Chr2	stalkie_big_nohaplotig	exon	43176550	43176554	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2173 2177 -
Chr2	stalkie_big_nohaplotig	exon	43176772	43176773	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2178 2179 -
Chr2	stalkie_big_nohaplotig	exon	43178463	43178466	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2180 2183 -
Chr2	stalkie_big_nohaplotig	exon	43179142	43179145	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2184 2187 -
Chr2	stalkie_big_nohaplotig	exon	43188874	43188885	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2188 2199 -
Chr2	stalkie_big_nohaplotig	exon	43195748	43195774	64	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2230 2260 -
Chr2	stalkie_big_nohaplotig	exon	43202878	43202886	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2264 2272 -
Chr2	stalkie_big_nohaplotig	exon	43209581	43209582	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2273 2274 -
Chr2	stalkie_big_nohaplotig	exon	43212248	43212249	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2275 2276 -
Chr2	stalkie_big_nohaplotig	exon	43212672	43212681	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2277 2286 -
Chr2	stalkie_big_nohaplotig	exon	43222767	43222778	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2307 2318 -
Chr2	stalkie_big_nohaplotig	exon	43224523	43224552	55	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2319 2358 -
Chr2	stalkie_big_nohaplotig	exon	43232204	43232213	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2392 2401 -
Chr2	stalkie_big_nohaplotig	exon	43260724	43260776	54	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2402 2462 -
Chr2	stalkie_big_nohaplotig	exon	43264888	43264896	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2463 2471 -
Chr2	stalkie_big_nohaplotig	exon	43272499	43272512	92	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2472 2485 -
Chr2	stalkie_big_nohaplotig	exon	43273513	43273557	47	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2547 2586 -
Chr2	stalkie_big_nohaplotig	exon	43276420	43276432	84	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2667 2679 -
Chr2	stalkie_big_nohaplotig	exon	43286059	43286061	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2680 2682 -
Chr2	stalkie_big_nohaplotig	exon	43286513	43286521	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2683 2691 -
Chr2	stalkie_big_nohaplotig	exon	43294126	43294127	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2760 2761 -
Chr2	stalkie_big_nohaplotig	exon	43300006	43300015	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2762 2771 -
Chr2	stalkie_big_nohaplotig	exon	43303648	43303703	48	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2807 2856 -
Chr2	stalkie_big_nohaplotig	exon	43305397	43305400	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2857 2860 -
Chr2	stalkie_big_nohaplotig	exon	43310348	43310351	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2861 2864 -
Chr2	stalkie_big_nohaplotig	exon	43314191	43314204	100	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2865 2878 -
Chr2	stalkie_big_nohaplotig	exon	43327314	43327972	74	-	.	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2910 3568 -
Chr2	stalkie_big_nohaplotig	CDS	42023864	42024620	.	-	1	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 2 758 .
Chr2	stalkie_big_nohaplotig	CDS	42024680	42024687	.	-	0	Parent=comp159453_c2_seq1.mrna1;Target=comp159453_c2_seq1 759 766 .
Chr2	gffcl	locus	42032096	42032448	.	-	.	ID=RLOC_00016857;geneIDs=comp70944_c0_seq1.path1;transcripts=comp70944_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42032096	42032448	.	-	.	ID=comp70944_c0_seq1.mrna1;geneID=comp70944_c0_seq1.path1;Name=comp70944_c0_seq1;Dir=indeterminatecoverage=98.6;identity=96.0;matches=308;mismatches=13;indels=0;unknowns=0;Target=comp70944_c0_seq1 270 202 .;locus=RLOC_00016857
Chr2	stalkie_big_nohaplotig	exon	42032096	42032265	98	-	.	Parent=comp70944_c0_seq1.mrna1;Target=comp70944_c0_seq1 347 178 .
Chr2	stalkie_big_nohaplotig	exon	42032298	42032448	92	-	.	Parent=comp70944_c0_seq1.mrna1;Target=comp70944_c0_seq1 156 6 .
Chr2	stalkie_big_nohaplotig	CDS	42032173	42032241	.	-	0	Parent=comp70944_c0_seq1.mrna1
Chr2	gffcl	locus	42034204	42034685	.	+	.	ID=RLOC_00016858;geneIDs=comp147673_c1_seq1.path1;transcripts=comp147673_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42034204	42034685	.	+	.	ID=comp147673_c1_seq1.mrna1;geneID=comp147673_c1_seq1.path1;Name=comp147673_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=472;mismatches=10;indels=0;unknowns=0;Target=comp147673_c1_seq1 482 1 .;CDS_Target=comp147673_c1_seq1 130 2 .;locus=RLOC_00016858
Chr2	stalkie_big_nohaplotig	exon	42034204	42034685	97	+	.	Parent=comp147673_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42034205	42034333	.	+	0	Parent=comp147673_c1_seq1.mrna1
Chr2	gffcl	locus	42035313	42035870	.	-	.	ID=RLOC_00016859;geneIDs=comp154334_c0_seq1.path1;transcripts=comp154334_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42035313	42035870	.	-	.	ID=comp154334_c0_seq1.mrna1;geneID=comp154334_c0_seq1.path1;Name=comp154334_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=555;mismatches=3;indels=0;unknowns=0;Target=comp154334_c0_seq1 558 1 .;CDS_Target=comp154334_c0_seq1 247 2 .;locus=RLOC_00016859
Chr2	stalkie_big_nohaplotig	exon	42035313	42035870	99	-	.	Parent=comp154334_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42035624	42035869	.	-	0	Parent=comp154334_c0_seq1.mrna1
Chr2	gffcl	locus	42039275	42047274	.	-	.	ID=RLOC_00016860;geneIDs=comp151074_c0_seq1.path1;transcripts=comp151074_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42039275	42047274	.	-	.	ID=comp151074_c0_seq1.mrna1;geneID=comp151074_c0_seq1.path1;Name=comp151074_c0_seq1;Dir=antisensecoverage=100.0;identity=99.0;matches=405;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016860
Chr2	stalkie_big_nohaplotig	exon	42039275	42039389	99	-	.	Parent=comp151074_c0_seq1.mrna1;Target=comp151074_c0_seq1 1 115 -
Chr2	stalkie_big_nohaplotig	exon	42044390	42044450	100	-	.	Parent=comp151074_c0_seq1.mrna1;Target=comp151074_c0_seq1 116 176 -
Chr2	stalkie_big_nohaplotig	exon	42047042	42047274	98	-	.	Parent=comp151074_c0_seq1.mrna1;Target=comp151074_c0_seq1 177 409 -
Chr2	stalkie_big_nohaplotig	CDS	42039276	42039389	.	-	0	Parent=comp151074_c0_seq1.mrna1;Target=comp151074_c0_seq1 2 115 .
Chr2	stalkie_big_nohaplotig	CDS	42044390	42044450	.	-	1	Parent=comp151074_c0_seq1.mrna1;Target=comp151074_c0_seq1 116 176 .
Chr2	stalkie_big_nohaplotig	CDS	42047042	42047079	.	-	0	Parent=comp151074_c0_seq1.mrna1;Target=comp151074_c0_seq1 177 214 .
Chr2	gffcl	locus	42040984	42041537	.	+	.	ID=RLOC_00016861;geneIDs=comp114851_c0_seq1.path1;transcripts=comp114851_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42040984	42041537	.	+	.	ID=comp114851_c0_seq1.mrna1;geneID=comp114851_c0_seq1.path1;Name=comp114851_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=551;mismatches=3;indels=0;unknowns=0;Target=comp114851_c0_seq1 554 1 .;CDS_Target=comp114851_c0_seq1 547 443 .;locus=RLOC_00016861
Chr2	stalkie_big_nohaplotig	exon	42040984	42041537	99	+	.	Parent=comp114851_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42041426	42041530	.	+	0	Parent=comp114851_c0_seq1.mrna1
Chr2	gffcl	locus	42048984	42054221	.	-	.	ID=RLOC_00016862;geneIDs=FBgn0033786.1.path1,FBgn0033786.2.path1,comp69382_c0_seq1.path1;transcripts=FBgn0033786.2.mrna1,FBgn0033786.1.mrna1,comp69382_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42048984	42054191	.	-	.	ID=FBgn0033786.2.mrna1;geneID=FBgn0033786.2.path1;Name=FBgn0033786.2;Dir=sensecoverage=100.0;identity=99.7;matches=1352;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016862
Chr2	stalkie_big_nohaplotig	exon	42048984	42050317	99	-	.	Parent=FBgn0033786.2.mrna1;Target=FBgn0033786.2 23 1356 +
Chr2	stalkie_big_nohaplotig	exon	42054170	42054191	95	-	.	Parent=FBgn0033786.2.mrna1;Target=FBgn0033786.2 1 22 +
Chr2	stalkie_big_nohaplotig	CDS	42048984	42050317	.	-	2	Parent=FBgn0033786.2.mrna1;Target=FBgn0033786.2 23 1356 +
Chr2	stalkie_big_nohaplotig	CDS	42054170	42054191	.	-	0	Parent=FBgn0033786.2.mrna1;Target=FBgn0033786.2 1 22 +
Chr2	stalkie_big_nohaplotig	mRNA	42050547	42054221	.	-	.	ID=FBgn0033786.1.mrna1;geneID=FBgn0033786.1.path1;Name=FBgn0033786.1;Dir=sensecoverage=100.0;identity=99.3;matches=903;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016862
Chr2	stalkie_big_nohaplotig	exon	42050547	42051403	99	-	.	Parent=FBgn0033786.1.mrna1;Target=FBgn0033786.1 53 909 +
Chr2	stalkie_big_nohaplotig	exon	42054170	42054221	98	-	.	Parent=FBgn0033786.1.mrna1;Target=FBgn0033786.1 1 52 +
Chr2	stalkie_big_nohaplotig	CDS	42050547	42051403	.	-	2	Parent=FBgn0033786.1.mrna1;Target=FBgn0033786.1 53 909 +
Chr2	stalkie_big_nohaplotig	CDS	42054170	42054221	.	-	0	Parent=FBgn0033786.1.mrna1;Target=FBgn0033786.1 1 52 +
Chr2	stalkie_big_nohaplotig	mRNA	42053771	42054188	.	-	.	ID=comp69382_c0_seq1.mrna1;geneID=comp69382_c0_seq1.path1;Name=comp69382_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.3;matches=415;mismatches=3;indels=0;unknowns=0;Target=comp69382_c0_seq1 418 1 .;CDS_Target=comp69382_c0_seq1 129 1 .;locus=RLOC_00016862
Chr2	stalkie_big_nohaplotig	exon	42053771	42054188	99	-	.	Parent=comp69382_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42054060	42054188	.	-	0	Parent=comp69382_c0_seq1.mrna1
Chr2	gffcl	locus	42052713	42053592	.	-	.	ID=RLOC_00016863;geneIDs=comp147117_c0_seq1.path1;transcripts=comp147117_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42052713	42053592	.	-	.	ID=comp147117_c0_seq1.mrna1;geneID=comp147117_c0_seq1.path1;Name=comp147117_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=869;mismatches=11;indels=10;unknowns=0;Target=comp147117_c0_seq1 890 1 .;CDS_Target=comp147117_c0_seq1 106 2 .;locus=RLOC_00016863
Chr2	stalkie_big_nohaplotig	exon	42052713	42053592	97	-	.	Parent=comp147117_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42053487	42053591	.	-	0	Parent=comp147117_c0_seq1.mrna1
Chr2	gffcl	locus	42065334	42065879	.	+	.	ID=RLOC_00016864;geneIDs=comp150609_c0_seq1.path1;transcripts=comp150609_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42065334	42065879	.	+	.	ID=comp150609_c0_seq1.mrna1;geneID=comp150609_c0_seq1.path1;Name=comp150609_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=542;mismatches=4;indels=0;unknowns=0;Target=comp150609_c0_seq1 546 1 .;CDS_Target=comp150609_c0_seq1 132 1 .;locus=RLOC_00016864
Chr2	stalkie_big_nohaplotig	exon	42065334	42065879	99	+	.	Parent=comp150609_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42065334	42065465	.	+	0	Parent=comp150609_c0_seq1.mrna1
Chr2	gffcl	locus	42066042	42066957	.	+	.	ID=RLOC_00016865;geneIDs=comp150379_c0_seq1.path1;transcripts=comp150379_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42066042	42066957	.	+	.	ID=comp150379_c0_seq1.mrna1;geneID=comp150379_c0_seq1.path1;Name=comp150379_c0_seq1;Dir=indeterminatecoverage=98.6;identity=99.3;matches=910;mismatches=6;indels=0;unknowns=0;Target=comp150379_c0_seq1 916 1 .;CDS_Target=comp150379_c0_seq1 909 817 .;locus=RLOC_00016865
Chr2	stalkie_big_nohaplotig	exon	42066042	42066957	99	+	.	Parent=comp150379_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42066858	42066950	.	+	0	Parent=comp150379_c0_seq1.mrna1
Chr2	gffcl	locus	42068700	42069622	.	+	.	ID=RLOC_00016866;geneIDs=FBgn0033787.1.path1;transcripts=FBgn0033787.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42068700	42069622	.	+	.	ID=FBgn0033787.1.mrna1;geneID=FBgn0033787.1.path1;Name=FBgn0033787.1;Dir=sensecoverage=99.3;identity=99.3;matches=849;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016866
Chr2	stalkie_big_nohaplotig	exon	42068700	42069100	99	+	.	Parent=FBgn0033787.1.mrna1;Target=FBgn0033787.1 7 407 +
Chr2	stalkie_big_nohaplotig	exon	42069169	42069622	99	+	.	Parent=FBgn0033787.1.mrna1;Target=FBgn0033787.1 408 861 +
Chr2	stalkie_big_nohaplotig	CDS	42068700	42069100	.	+	0	Parent=FBgn0033787.1.mrna1;Target=FBgn0033787.1 7 407 +
Chr2	stalkie_big_nohaplotig	CDS	42069169	42069622	.	+	1	Parent=FBgn0033787.1.mrna1;Target=FBgn0033787.1 408 861 +
Chr2	gffcl	locus	42101655	42102738	.	-	.	ID=RLOC_00016867;geneIDs=comp151514_c0_seq1.path1;transcripts=comp151514_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42101655	42102738	.	-	.	ID=comp151514_c0_seq1.mrna1;geneID=comp151514_c0_seq1.path1;Name=comp151514_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.0;matches=1082;mismatches=2;indels=9;unknowns=0;Target=comp151514_c0_seq1 1094 2 .;CDS_Target=comp151514_c0_seq1 530 447 .;locus=RLOC_00016867
Chr2	stalkie_big_nohaplotig	exon	42101655	42102738	98	-	.	Parent=comp151514_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42102218	42102301	.	-	0	Parent=comp151514_c0_seq1.mrna1
Chr2	gffcl	locus	42170629	42171539	.	+	.	ID=RLOC_00016869;geneIDs=comp162126_c0_seq1.path1;transcripts=comp162126_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42170629	42171539	.	+	.	ID=comp162126_c0_seq1.mrna1;geneID=comp162126_c0_seq1.path1;Name=comp162126_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=897;mismatches=14;indels=0;unknowns=0;Target=comp162126_c0_seq1 911 1 .;CDS_Target=comp162126_c0_seq1 232 167 .;locus=RLOC_00016869
Chr2	stalkie_big_nohaplotig	exon	42170629	42171539	98	+	.	Parent=comp162126_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42170795	42170860	.	+	0	Parent=comp162126_c0_seq1.mrna1
Chr2	gffcl	locus	42181971	42330691	.	+	.	ID=RLOC_00016870;geneIDs=comp155593_c0_seq1.path1;transcripts=comp155593_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42181971	42330691	.	+	.	ID=comp155593_c0_seq1.mrna1;geneID=comp155593_c0_seq1.path1;Name=comp155593_c0_seq1;Dir=antisensecoverage=73.6;identity=92.7;matches=782;mismatches=23;indels=39;unknowns=0;Target=comp155593_c0_seq1 1038 1124 .;locus=RLOC_00016870
Chr2	stalkie_big_nohaplotig	exon	42181971	42182664	97	+	.	Parent=comp155593_c0_seq1.mrna1;Target=comp155593_c0_seq1 519 1214 -
Chr2	stalkie_big_nohaplotig	exon	42187793	42187797	100	+	.	Parent=comp155593_c0_seq1.mrna1;Target=comp155593_c0_seq1 514 518 -
Chr2	stalkie_big_nohaplotig	exon	42202399	42202425	35	+	.	Parent=comp155593_c0_seq1.mrna1;Target=comp155593_c0_seq1 450 513 -
Chr2	stalkie_big_nohaplotig	exon	42209316	42209324	100	+	.	Parent=comp155593_c0_seq1.mrna1;Target=comp155593_c0_seq1 441 449 -
Chr2	stalkie_big_nohaplotig	exon	42249943	42249944	100	+	.	Parent=comp155593_c0_seq1.mrna1;Target=comp155593_c0_seq1 439 440 -
Chr2	stalkie_big_nohaplotig	exon	42257899	42257900	100	+	.	Parent=comp155593_c0_seq1.mrna1;Target=comp155593_c0_seq1 437 438 -
Chr2	stalkie_big_nohaplotig	exon	42264408	42264410	100	+	.	Parent=comp155593_c0_seq1.mrna1;Target=comp155593_c0_seq1 434 436 -
Chr2	stalkie_big_nohaplotig	exon	42270738	42270746	100	+	.	Parent=comp155593_c0_seq1.mrna1;Target=comp155593_c0_seq1 425 433 -
Chr2	stalkie_big_nohaplotig	exon	42274720	42274727	87	+	.	Parent=comp155593_c0_seq1.mrna1;Target=comp155593_c0_seq1 417 424 -
Chr2	stalkie_big_nohaplotig	exon	42289392	42289393	100	+	.	Parent=comp155593_c0_seq1.mrna1;Target=comp155593_c0_seq1 415 416 -
Chr2	stalkie_big_nohaplotig	exon	42289647	42289648	100	+	.	Parent=comp155593_c0_seq1.mrna1;Target=comp155593_c0_seq1 413 414 -
Chr2	stalkie_big_nohaplotig	exon	42305239	42305248	100	+	.	Parent=comp155593_c0_seq1.mrna1;Target=comp155593_c0_seq1 403 412 -
Chr2	stalkie_big_nohaplotig	exon	42305918	42305921	100	+	.	Parent=comp155593_c0_seq1.mrna1;Target=comp155593_c0_seq1 399 402 -
Chr2	stalkie_big_nohaplotig	exon	42318840	42318849	100	+	.	Parent=comp155593_c0_seq1.mrna1;Target=comp155593_c0_seq1 342 351 -
Chr2	stalkie_big_nohaplotig	exon	42320955	42320961	100	+	.	Parent=comp155593_c0_seq1.mrna1;Target=comp155593_c0_seq1 331 337 -
Chr2	stalkie_big_nohaplotig	exon	42330282	42330285	100	+	.	Parent=comp155593_c0_seq1.mrna1;Target=comp155593_c0_seq1 327 330 -
Chr2	stalkie_big_nohaplotig	exon	42330686	42330691	83	+	.	Parent=comp155593_c0_seq1.mrna1;Target=comp155593_c0_seq1 321 326 -
Chr2	stalkie_big_nohaplotig	CDS	42182061	42182147	.	+	0	Parent=comp155593_c0_seq1.mrna1
Chr2	gffcl	locus	42207610	42244401	.	+	.	ID=RLOC_00016871;geneIDs=FBgn0034624.1.path1,comp152404_c0_seq1.path1;transcripts=comp152404_c0_seq1.mrna1,FBgn0034624.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42207610	42244401	.	+	.	ID=comp152404_c0_seq1.mrna1;geneID=comp152404_c0_seq1.path1;Name=comp152404_c0_seq1;Dir=sensecoverage=100.0;identity=95.4;matches=666;mismatches=13;indels=19;unknowns=0;locus=RLOC_00016871
Chr2	stalkie_big_nohaplotig	exon	42207610	42207785	98	+	.	Parent=comp152404_c0_seq1.mrna1;Target=comp152404_c0_seq1 1 176 +
Chr2	stalkie_big_nohaplotig	exon	42208096	42208245	100	+	.	Parent=comp152404_c0_seq1.mrna1;Target=comp152404_c0_seq1 177 326 +
Chr2	stalkie_big_nohaplotig	exon	42243979	42244059	77	+	.	Parent=comp152404_c0_seq1.mrna1;Target=comp152404_c0_seq1 327 422 +
Chr2	stalkie_big_nohaplotig	exon	42244130	42244401	97	+	.	Parent=comp152404_c0_seq1.mrna1;Target=comp152404_c0_seq1 423 698 +
Chr2	stalkie_big_nohaplotig	CDS	42207612	42207785	.	+	0	Parent=comp152404_c0_seq1.mrna1;Target=comp152404_c0_seq1 3 176 +
Chr2	stalkie_big_nohaplotig	CDS	42208096	42208245	.	+	0	Parent=comp152404_c0_seq1.mrna1;Target=comp152404_c0_seq1 177 326 +
Chr2	stalkie_big_nohaplotig	CDS	42243979	42244032	.	+	0	Parent=comp152404_c0_seq1.mrna1;Target=comp152404_c0_seq1 327 395 +
Chr2	stalkie_big_nohaplotig	mRNA	42207612	42210337	.	+	.	ID=FBgn0034624.1.mrna1;geneID=FBgn0034624.1.path1;Name=FBgn0034624.1;Dir=sensecoverage=100.0;identity=98.9;matches=617;mismatches=7;indels=0;unknowns=0;locus=RLOC_00016871
Chr2	stalkie_big_nohaplotig	exon	42207612	42207785	98	+	.	Parent=FBgn0034624.1.mrna1;Target=FBgn0034624.1 1 174 +
Chr2	stalkie_big_nohaplotig	exon	42208096	42208245	100	+	.	Parent=FBgn0034624.1.mrna1;Target=FBgn0034624.1 175 324 +
Chr2	stalkie_big_nohaplotig	exon	42209967	42210211	98	+	.	Parent=FBgn0034624.1.mrna1;Target=FBgn0034624.1 325 569 +
Chr2	stalkie_big_nohaplotig	exon	42210283	42210337	100	+	.	Parent=FBgn0034624.1.mrna1;Target=FBgn0034624.1 570 624 +
Chr2	stalkie_big_nohaplotig	CDS	42207612	42207785	.	+	0	Parent=FBgn0034624.1.mrna1;Target=FBgn0034624.1 1 174 +
Chr2	stalkie_big_nohaplotig	CDS	42208096	42208245	.	+	0	Parent=FBgn0034624.1.mrna1;Target=FBgn0034624.1 175 324 +
Chr2	stalkie_big_nohaplotig	CDS	42209967	42210211	.	+	0	Parent=FBgn0034624.1.mrna1;Target=FBgn0034624.1 325 569 +
Chr2	stalkie_big_nohaplotig	CDS	42210283	42210337	.	+	1	Parent=FBgn0034624.1.mrna1;Target=FBgn0034624.1 570 624 +
Chr2	gffcl	locus	42217217	42218268	.	-	.	ID=RLOC_00016872;geneIDs=FBgn0034623.2.path1;transcripts=FBgn0034623.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42217217	42218268	.	-	.	ID=FBgn0034623.2.mrna1;geneID=FBgn0034623.2.path1;Name=FBgn0034623.2;Dir=sensecoverage=100.0;identity=100.0;matches=921;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016872
Chr2	stalkie_big_nohaplotig	exon	42217217	42217469	100	-	.	Parent=FBgn0034623.2.mrna1;Target=FBgn0034623.2 669 921 +
Chr2	stalkie_big_nohaplotig	exon	42217532	42217926	100	-	.	Parent=FBgn0034623.2.mrna1;Target=FBgn0034623.2 274 668 +
Chr2	stalkie_big_nohaplotig	exon	42217996	42218268	100	-	.	Parent=FBgn0034623.2.mrna1;Target=FBgn0034623.2 1 273 +
Chr2	stalkie_big_nohaplotig	CDS	42217217	42217469	.	-	1	Parent=FBgn0034623.2.mrna1;Target=FBgn0034623.2 669 921 +
Chr2	stalkie_big_nohaplotig	CDS	42217532	42217926	.	-	0	Parent=FBgn0034623.2.mrna1;Target=FBgn0034623.2 274 668 +
Chr2	stalkie_big_nohaplotig	CDS	42217996	42218268	.	-	0	Parent=FBgn0034623.2.mrna1;Target=FBgn0034623.2 1 273 +
Chr2	stalkie_big_nohaplotig	mRNA	42249676	42257600	.	-	.	ID=comp162021_c0_seq1.mrna1;geneID=comp162021_c0_seq1.path1;Name=comp162021_c0_seq1;Dir=antisensecoverage=52.4;identity=99.5;matches=2455;mismatches=13;indels=0;unknowns=0;locus=RLOC_00016873
Chr2	stalkie_big_nohaplotig	exon	42249676	42249891	99	-	.	Parent=comp162021_c0_seq1.mrna1;Target=comp162021_c0_seq1 2240 2455 -
Chr2	stalkie_big_nohaplotig	exon	42249957	42250169	98	-	.	Parent=comp162021_c0_seq1.mrna1;Target=comp162021_c0_seq1 2456 2668 -
Chr2	stalkie_big_nohaplotig	exon	42250234	42250526	99	-	.	Parent=comp162021_c0_seq1.mrna1;Target=comp162021_c0_seq1 2669 2961 -
Chr2	stalkie_big_nohaplotig	exon	42250611	42251261	99	-	.	Parent=comp162021_c0_seq1.mrna1;Target=comp162021_c0_seq1 2962 3612 -
Chr2	stalkie_big_nohaplotig	exon	42251332	42251424	98	-	.	Parent=comp162021_c0_seq1.mrna1;Target=comp162021_c0_seq1 3613 3705 -
Chr2	stalkie_big_nohaplotig	exon	42254898	42255108	100	-	.	Parent=comp162021_c0_seq1.mrna1;Target=comp162021_c0_seq1 3706 3916 -
Chr2	stalkie_big_nohaplotig	exon	42256738	42257038	100	-	.	Parent=comp162021_c0_seq1.mrna1;Target=comp162021_c0_seq1 3917 4217 -
Chr2	stalkie_big_nohaplotig	exon	42257111	42257600	99	-	.	Parent=comp162021_c0_seq1.mrna1;Target=comp162021_c0_seq1 4218 4707 -
Chr2	stalkie_big_nohaplotig	CDS	42249676	42249891	.	-	0	Parent=comp162021_c0_seq1.mrna1;Target=comp162021_c0_seq1 2240 2455 .
Chr2	stalkie_big_nohaplotig	CDS	42249957	42250169	.	-	0	Parent=comp162021_c0_seq1.mrna1;Target=comp162021_c0_seq1 2456 2668 .
Chr2	stalkie_big_nohaplotig	CDS	42250234	42250526	.	-	2	Parent=comp162021_c0_seq1.mrna1;Target=comp162021_c0_seq1 2669 2961 .
Chr2	stalkie_big_nohaplotig	CDS	42250611	42251261	.	-	2	Parent=comp162021_c0_seq1.mrna1;Target=comp162021_c0_seq1 2962 3612 .
Chr2	stalkie_big_nohaplotig	CDS	42251332	42251424	.	-	2	Parent=comp162021_c0_seq1.mrna1;Target=comp162021_c0_seq1 3613 3705 .
Chr2	stalkie_big_nohaplotig	CDS	42254898	42255108	.	-	0	Parent=comp162021_c0_seq1.mrna1;Target=comp162021_c0_seq1 3706 3916 .
Chr2	stalkie_big_nohaplotig	CDS	42256738	42257038	.	-	1	Parent=comp162021_c0_seq1.mrna1;Target=comp162021_c0_seq1 3917 4217 .
Chr2	stalkie_big_nohaplotig	CDS	42257111	42257598	.	-	0	Parent=comp162021_c0_seq1.mrna1;Target=comp162021_c0_seq1 4218 4705 .
Chr2	gffcl	locus	42267881	42269631	.	+	.	ID=RLOC_00016874;geneIDs=FBgn0035036.1.path1;transcripts=FBgn0035036.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42267881	42269631	.	+	.	ID=FBgn0035036.1.mrna1;geneID=FBgn0035036.1.path1;Name=FBgn0035036.1;Dir=sensecoverage=100.0;identity=99.2;matches=1441;mismatches=11;indels=0;unknowns=0;locus=RLOC_00016874
Chr2	stalkie_big_nohaplotig	exon	42267881	42267901	100	+	.	Parent=FBgn0035036.1.mrna1;Target=FBgn0035036.1 1 21 +
Chr2	stalkie_big_nohaplotig	exon	42267978	42268112	100	+	.	Parent=FBgn0035036.1.mrna1;Target=FBgn0035036.1 22 156 +
Chr2	stalkie_big_nohaplotig	exon	42268165	42268390	100	+	.	Parent=FBgn0035036.1.mrna1;Target=FBgn0035036.1 157 382 +
Chr2	stalkie_big_nohaplotig	exon	42268450	42268912	99	+	.	Parent=FBgn0035036.1.mrna1;Target=FBgn0035036.1 383 845 +
Chr2	stalkie_big_nohaplotig	exon	42268966	42269353	98	+	.	Parent=FBgn0035036.1.mrna1;Target=FBgn0035036.1 846 1233 +
Chr2	stalkie_big_nohaplotig	exon	42269413	42269631	99	+	.	Parent=FBgn0035036.1.mrna1;Target=FBgn0035036.1 1234 1452 +
Chr2	stalkie_big_nohaplotig	CDS	42267881	42267901	.	+	0	Parent=FBgn0035036.1.mrna1;Target=FBgn0035036.1 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	42267978	42268112	.	+	0	Parent=FBgn0035036.1.mrna1;Target=FBgn0035036.1 22 156 +
Chr2	stalkie_big_nohaplotig	CDS	42268165	42268390	.	+	0	Parent=FBgn0035036.1.mrna1;Target=FBgn0035036.1 157 382 +
Chr2	stalkie_big_nohaplotig	CDS	42268450	42268912	.	+	2	Parent=FBgn0035036.1.mrna1;Target=FBgn0035036.1 383 845 +
Chr2	stalkie_big_nohaplotig	CDS	42268966	42269353	.	+	1	Parent=FBgn0035036.1.mrna1;Target=FBgn0035036.1 846 1233 +
Chr2	stalkie_big_nohaplotig	CDS	42269413	42269631	.	+	0	Parent=FBgn0035036.1.mrna1;Target=FBgn0035036.1 1234 1452 +
Chr2	stalkie_big_nohaplotig	mRNA	42270431	43354598	.	+	.	ID=comp161207_c0_seq1.mrna1;geneID=comp161207_c0_seq1.path1;Name=comp161207_c0_seq1;Dir=antisensecoverage=80.9;identity=91.6;matches=893;mismatches=28;indels=54;unknowns=0;locus=RLOC_00016875
Chr2	stalkie_big_nohaplotig	exon	42270431	42270475	55	+	.	Parent=comp161207_c0_seq1.mrna1;Target=comp161207_c0_seq1 1664 1728 -
Chr2	stalkie_big_nohaplotig	exon	42278864	42278899	52	+	.	Parent=comp161207_c0_seq1.mrna1;Target=comp161207_c0_seq1 1644 1663 -
Chr2	stalkie_big_nohaplotig	exon	42291385	42291420	66	+	.	Parent=comp161207_c0_seq1.mrna1;Target=comp161207_c0_seq1 1617 1643 -
Chr2	stalkie_big_nohaplotig	exon	42291925	42291928	100	+	.	Parent=comp161207_c0_seq1.mrna1;Target=comp161207_c0_seq1 1613 1616 -
Chr2	stalkie_big_nohaplotig	exon	42295946	42295949	100	+	.	Parent=comp161207_c0_seq1.mrna1;Target=comp161207_c0_seq1 1609 1612 -
Chr2	stalkie_big_nohaplotig	exon	42296573	42296577	100	+	.	Parent=comp161207_c0_seq1.mrna1;Target=comp161207_c0_seq1 1604 1608 -
Chr2	stalkie_big_nohaplotig	exon	42296945	42296952	100	+	.	Parent=comp161207_c0_seq1.mrna1;Target=comp161207_c0_seq1 1596 1603 -
Chr2	stalkie_big_nohaplotig	exon	42298799	42298806	100	+	.	Parent=comp161207_c0_seq1.mrna1;Target=comp161207_c0_seq1 1588 1595 -
Chr2	stalkie_big_nohaplotig	exon	42300200	42300201	100	+	.	Parent=comp161207_c0_seq1.mrna1;Target=comp161207_c0_seq1 1586 1587 -
Chr2	stalkie_big_nohaplotig	exon	42306921	42306959	51	+	.	Parent=comp161207_c0_seq1.mrna1;Target=comp161207_c0_seq1 1548 1585 -
Chr2	stalkie_big_nohaplotig	exon	43344954	43345135	99	+	.	Parent=comp161207_c0_seq1.mrna1;Target=comp161207_c0_seq1 583 764 -
Chr2	stalkie_big_nohaplotig	exon	43348365	43348498	99	+	.	Parent=comp161207_c0_seq1.mrna1;Target=comp161207_c0_seq1 449 582 -
Chr2	stalkie_big_nohaplotig	exon	43349005	43349145	99	+	.	Parent=comp161207_c0_seq1.mrna1;Target=comp161207_c0_seq1 308 448 -
Chr2	stalkie_big_nohaplotig	exon	43354292	43354598	100	+	.	Parent=comp161207_c0_seq1.mrna1;Target=comp161207_c0_seq1 1 307 -
Chr2	stalkie_big_nohaplotig	CDS	43345054	43345135	.	+	0	Parent=comp161207_c0_seq1.mrna1;Target=comp161207_c0_seq1 583 664 .
Chr2	stalkie_big_nohaplotig	CDS	43348365	43348498	.	+	2	Parent=comp161207_c0_seq1.mrna1;Target=comp161207_c0_seq1 449 582 .
Chr2	stalkie_big_nohaplotig	CDS	43349005	43349145	.	+	0	Parent=comp161207_c0_seq1.mrna1;Target=comp161207_c0_seq1 308 448 .
Chr2	stalkie_big_nohaplotig	CDS	43354292	43354438	.	+	0	Parent=comp161207_c0_seq1.mrna1;Target=comp161207_c0_seq1 161 307 .
Chr2	stalkie_big_nohaplotig	mRNA	42291059	44236516	.	+	.	ID=comp155827_c1_seq1.mrna1;geneID=comp155827_c1_seq1.path1;Name=comp155827_c1_seq1;Dir=indeterminatecoverage=93.9;identity=87.9;matches=1529;mismatches=56;indels=154;unknowns=0;Target=comp155827_c1_seq1 289 167 .;locus=RLOC_00016875
Chr2	stalkie_big_nohaplotig	exon	42291059	42292023	98	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 955 1 .
Chr2	stalkie_big_nohaplotig	exon	42295000	42295003	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 959 956 .
Chr2	stalkie_big_nohaplotig	exon	42301664	42301672	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 968 960 .
Chr2	stalkie_big_nohaplotig	exon	42315694	42315697	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 972 969 .
Chr2	stalkie_big_nohaplotig	exon	42321344	42321347	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 976 973 .
Chr2	stalkie_big_nohaplotig	exon	42326991	42327001	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 987 977 .
Chr2	stalkie_big_nohaplotig	exon	44005082	44005117	55	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1017 991 .
Chr2	stalkie_big_nohaplotig	exon	44005267	44005272	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1023 1018 .
Chr2	stalkie_big_nohaplotig	exon	44005568	44005574	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1030 1024 .
Chr2	stalkie_big_nohaplotig	exon	44006533	44006535	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1033 1031 .
Chr2	stalkie_big_nohaplotig	exon	44012715	44012720	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1039 1034 .
Chr2	stalkie_big_nohaplotig	exon	44017685	44017688	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1043 1040 .
Chr2	stalkie_big_nohaplotig	exon	44021598	44021606	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1052 1044 .
Chr2	stalkie_big_nohaplotig	exon	44029507	44029511	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1057 1053 .
Chr2	stalkie_big_nohaplotig	exon	44036842	44036850	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1066 1058 .
Chr2	stalkie_big_nohaplotig	exon	44042228	44042233	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1072 1067 .
Chr2	stalkie_big_nohaplotig	exon	44059734	44059736	66	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1075 1073 .
Chr2	stalkie_big_nohaplotig	exon	44067114	44067121	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1083 1076 .
Chr2	stalkie_big_nohaplotig	exon	44067328	44067339	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1095 1084 .
Chr2	stalkie_big_nohaplotig	exon	44069421	44069423	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1098 1096 .
Chr2	stalkie_big_nohaplotig	exon	44083486	44083490	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1103 1099 .
Chr2	stalkie_big_nohaplotig	exon	44089029	44089039	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1114 1104 .
Chr2	stalkie_big_nohaplotig	exon	44094137	44094139	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1117 1115 .
Chr2	stalkie_big_nohaplotig	exon	44100487	44100545	37	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1142 1118 .
Chr2	stalkie_big_nohaplotig	exon	44101148	44101204	26	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1160 1143 .
Chr2	stalkie_big_nohaplotig	exon	44101516	44101518	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1163 1161 .
Chr2	stalkie_big_nohaplotig	exon	44102826	44102839	92	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1177 1164 .
Chr2	stalkie_big_nohaplotig	exon	44105441	44105449	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1220 1212 .
Chr2	stalkie_big_nohaplotig	exon	44107076	44107084	60	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1235 1226 .
Chr2	stalkie_big_nohaplotig	exon	44107557	44107573	76	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1251 1236 .
Chr2	stalkie_big_nohaplotig	exon	44114869	44114877	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1260 1252 .
Chr2	stalkie_big_nohaplotig	exon	44115710	44115713	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1264 1261 .
Chr2	stalkie_big_nohaplotig	exon	44119585	44119587	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1267 1265 .
Chr2	stalkie_big_nohaplotig	exon	44123365	44123374	90	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1277 1268 .
Chr2	stalkie_big_nohaplotig	exon	44124805	44124815	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1288 1278 .
Chr2	stalkie_big_nohaplotig	exon	44132324	44132328	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1293 1289 .
Chr2	stalkie_big_nohaplotig	exon	44137708	44137718	90	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1304 1294 .
Chr2	stalkie_big_nohaplotig	exon	44142679	44142687	77	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1313 1305 .
Chr2	stalkie_big_nohaplotig	exon	44148783	44148806	83	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1337 1314 .
Chr2	stalkie_big_nohaplotig	exon	44152296	44152325	80	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1367 1338 .
Chr2	stalkie_big_nohaplotig	exon	44156211	44156222	91	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1379 1368 .
Chr2	stalkie_big_nohaplotig	exon	44162073	44162077	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1413 1409 .
Chr2	stalkie_big_nohaplotig	exon	44169558	44169567	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1423 1414 .
Chr2	stalkie_big_nohaplotig	exon	44172338	44172344	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1430 1424 .
Chr2	stalkie_big_nohaplotig	exon	44175321	44175322	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1432 1431 .
Chr2	stalkie_big_nohaplotig	exon	44177580	44177588	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1441 1433 .
Chr2	stalkie_big_nohaplotig	exon	44177951	44177956	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1447 1442 .
Chr2	stalkie_big_nohaplotig	exon	44179662	44179674	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1460 1448 .
Chr2	stalkie_big_nohaplotig	exon	44187879	44187913	53	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1507 1461 .
Chr2	stalkie_big_nohaplotig	exon	44196530	44196554	64	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1527 1508 .
Chr2	stalkie_big_nohaplotig	exon	44196719	44196727	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1536 1528 .
Chr2	stalkie_big_nohaplotig	exon	44197749	44197757	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1545 1537 .
Chr2	stalkie_big_nohaplotig	exon	44199061	44199077	76	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1559 1546 .
Chr2	stalkie_big_nohaplotig	exon	44204555	44204564	90	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1569 1560 .
Chr2	stalkie_big_nohaplotig	exon	44206209	44206213	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1574 1570 .
Chr2	stalkie_big_nohaplotig	exon	44214960	44214969	83	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1586 1575 .
Chr2	stalkie_big_nohaplotig	exon	44221741	44221745	80	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1591 1587 .
Chr2	stalkie_big_nohaplotig	exon	44222523	44222526	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1614 1611 .
Chr2	stalkie_big_nohaplotig	exon	44223389	44223399	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1625 1615 .
Chr2	stalkie_big_nohaplotig	exon	44230865	44230871	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1637 1631 .
Chr2	stalkie_big_nohaplotig	exon	44231761	44231781	46	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1682 1638 .
Chr2	stalkie_big_nohaplotig	exon	44233493	44233500	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1690 1683 .
Chr2	stalkie_big_nohaplotig	exon	44235852	44235877	69	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1708 1691 .
Chr2	stalkie_big_nohaplotig	exon	44236305	44236309	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1713 1709 .
Chr2	stalkie_big_nohaplotig	exon	44236511	44236516	100	+	.	Parent=comp155827_c1_seq1.mrna1;Target=comp155827_c1_seq1 1719 1714 .
Chr2	stalkie_big_nohaplotig	CDS	42291224	42291346	.	+	0	Parent=comp155827_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43344955	43354435	.	+	.	ID=FBgn0085426.1.mrna2;geneID=FBgn0085426.1.path2;Name=FBgn0085426.1;Dir=sensecoverage=35.8;identity=99.6;matches=457;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016875
Chr2	stalkie_big_nohaplotig	exon	43344955	43345135	99	+	.	Parent=FBgn0085426.1.mrna2;Target=FBgn0085426.1 823 1003 +
Chr2	stalkie_big_nohaplotig	exon	43348365	43348498	99	+	.	Parent=FBgn0085426.1.mrna2;Target=FBgn0085426.1 1004 1137 +
Chr2	stalkie_big_nohaplotig	exon	43354292	43354435	100	+	.	Parent=FBgn0085426.1.mrna2;Target=FBgn0085426.1 1138 1281 +
Chr2	stalkie_big_nohaplotig	CDS	43344955	43345135	.	+	0	Parent=FBgn0085426.1.mrna2;Target=FBgn0085426.1 823 1003 +
Chr2	stalkie_big_nohaplotig	CDS	43348365	43348498	.	+	2	Parent=FBgn0085426.1.mrna2;Target=FBgn0085426.1 1004 1137 +
Chr2	stalkie_big_nohaplotig	CDS	43354292	43354435	.	+	0	Parent=FBgn0085426.1.mrna2;Target=FBgn0085426.1 1138 1281 +
Chr2	stalkie_big_nohaplotig	mRNA	44041691	44042731	.	-	.	ID=FBgn0016762.1.mrna1;geneID=FBgn0016762.1.path1;Name=FBgn0016762.1;Dir=indeterminatecoverage=99.8;identity=99.1;matches=1033;mismatches=8;indels=1;unknowns=0;Target=FBgn0016762.1 1044 3 .;CDS_Target=FBgn0016762.1 140 3 .;locus=RLOC_00016875
Chr2	stalkie_big_nohaplotig	exon	44041691	44042731	99	-	.	Parent=FBgn0016762.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	44042595	44042731	.	-	0	Parent=FBgn0016762.1.mrna1
Chr2	gffcl	locus	42278115	42282387	.	+	.	ID=RLOC_00016876;geneIDs=FBgn0033215.1.path1;transcripts=FBgn0033215.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42278115	42282387	.	+	.	ID=FBgn0033215.1.mrna1;geneID=FBgn0033215.1.path1;Name=FBgn0033215.1;Dir=sensecoverage=100.0;identity=99.7;matches=1068;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016876
Chr2	stalkie_big_nohaplotig	exon	42278115	42278258	99	+	.	Parent=FBgn0033215.1.mrna1;Target=FBgn0033215.1 1 144 +
Chr2	stalkie_big_nohaplotig	exon	42278326	42278423	98	+	.	Parent=FBgn0033215.1.mrna1;Target=FBgn0033215.1 145 242 +
Chr2	stalkie_big_nohaplotig	exon	42278485	42278616	100	+	.	Parent=FBgn0033215.1.mrna1;Target=FBgn0033215.1 243 374 +
Chr2	stalkie_big_nohaplotig	exon	42281558	42281899	100	+	.	Parent=FBgn0033215.1.mrna1;Target=FBgn0033215.1 375 716 +
Chr2	stalkie_big_nohaplotig	exon	42281950	42282149	99	+	.	Parent=FBgn0033215.1.mrna1;Target=FBgn0033215.1 717 916 +
Chr2	stalkie_big_nohaplotig	exon	42282233	42282387	100	+	.	Parent=FBgn0033215.1.mrna1;Target=FBgn0033215.1 917 1071 +
Chr2	stalkie_big_nohaplotig	CDS	42278115	42278258	.	+	0	Parent=FBgn0033215.1.mrna1;Target=FBgn0033215.1 1 144 +
Chr2	stalkie_big_nohaplotig	CDS	42278326	42278423	.	+	0	Parent=FBgn0033215.1.mrna1;Target=FBgn0033215.1 145 242 +
Chr2	stalkie_big_nohaplotig	CDS	42278485	42278616	.	+	1	Parent=FBgn0033215.1.mrna1;Target=FBgn0033215.1 243 374 +
Chr2	stalkie_big_nohaplotig	CDS	42281558	42281899	.	+	1	Parent=FBgn0033215.1.mrna1;Target=FBgn0033215.1 375 716 +
Chr2	stalkie_big_nohaplotig	CDS	42281950	42282149	.	+	1	Parent=FBgn0033215.1.mrna1;Target=FBgn0033215.1 717 916 +
Chr2	stalkie_big_nohaplotig	CDS	42282233	42282387	.	+	2	Parent=FBgn0033215.1.mrna1;Target=FBgn0033215.1 917 1071 +
Chr2	gffcl	locus	42282439	42285105	.	+	.	ID=RLOC_00016877;geneIDs=comp49419_c0_seq1.path1;transcripts=comp49419_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42282439	42285105	.	+	.	ID=comp49419_c0_seq1.mrna1;geneID=comp49419_c0_seq1.path1;Name=comp49419_c0_seq1;Dir=indeterminatecoverage=96.5;identity=91.2;matches=780;mismatches=54;indels=21;unknowns=0;Target=comp49419_c0_seq1 576 532 .;locus=RLOC_00016877
Chr2	stalkie_big_nohaplotig	exon	42282439	42283020	93	+	.	Parent=comp49419_c0_seq1.mrna1;Target=comp49419_c0_seq1 619 35 .
Chr2	stalkie_big_nohaplotig	exon	42284817	42284824	100	+	.	Parent=comp49419_c0_seq1.mrna1;Target=comp49419_c0_seq1 627 620 .
Chr2	stalkie_big_nohaplotig	exon	42284838	42284880	88	+	.	Parent=comp49419_c0_seq1.mrna1;Target=comp49419_c0_seq1 710 668 .
Chr2	stalkie_big_nohaplotig	exon	42284887	42285105	86	+	.	Parent=comp49419_c0_seq1.mrna1;Target=comp49419_c0_seq1 963 763 .
Chr2	stalkie_big_nohaplotig	CDS	42282933	42282977	.	+	0	Parent=comp49419_c0_seq1.mrna1
Chr2	gffcl	locus	42285120	42285444	.	+	.	ID=RLOC_00016878;geneIDs=comp158106_c0_seq1.path1;transcripts=comp158106_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42285120	42285444	.	+	.	ID=comp158106_c0_seq1.mrna1;geneID=comp158106_c0_seq1.path1;Name=comp158106_c0_seq1;Dir=indeterminatecoverage=99.4;identity=97.9;matches=320;mismatches=5;indels=2;unknowns=0;Target=comp158106_c0_seq1 329 3 .;CDS_Target=comp158106_c0_seq1 228 151 .;locus=RLOC_00016878
Chr2	stalkie_big_nohaplotig	exon	42285120	42285444	97	+	.	Parent=comp158106_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42285266	42285343	.	+	0	Parent=comp158106_c0_seq1.mrna1
Chr2	gffcl	locus	42286163	42286621	.	-	.	ID=RLOC_00016879;geneIDs=comp151500_c0_seq1.path1;transcripts=comp151500_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42286163	42286621	.	-	.	ID=comp151500_c0_seq1.mrna1;geneID=comp151500_c0_seq1.path1;Name=comp151500_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.4;matches=424;mismatches=18;indels=17;unknowns=0;Target=comp151500_c0_seq1 442 1 .;CDS_Target=comp151500_c0_seq1 203 144 .;locus=RLOC_00016879
Chr2	stalkie_big_nohaplotig	exon	42286163	42286621	92	-	.	Parent=comp151500_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42286413	42286472	.	-	0	Parent=comp151500_c0_seq1.mrna1
Chr2	gffcl	locus	42287140	42289853	.	-	.	ID=RLOC_00016880;geneIDs=comp159698_c0_seq1.path1;transcripts=comp159698_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42287140	42289853	.	-	.	ID=comp159698_c0_seq1.mrna1;geneID=comp159698_c0_seq1.path1;Name=comp159698_c0_seq1;Dir=indeterminatecoverage=95.6;identity=93.2;matches=1322;mismatches=46;indels=51;unknowns=0;Target=comp159698_c0_seq1 1124 1026 .;locus=RLOC_00016880
Chr2	stalkie_big_nohaplotig	exon	42287140	42287443	98	-	.	Parent=comp159698_c0_seq1.mrna1;Target=comp159698_c0_seq1 1450 1144 .
Chr2	stalkie_big_nohaplotig	exon	42288757	42289853	91	-	.	Parent=comp159698_c0_seq1.mrna1;Target=comp159698_c0_seq1 1143 65 .
Chr2	stalkie_big_nohaplotig	CDS	42288776	42288874	.	-	0	Parent=comp159698_c0_seq1.mrna1
Chr2	gffcl	locus	42290299	42290997	.	+	.	ID=RLOC_00016881;geneIDs=comp154815_c0_seq1.path1;transcripts=comp154815_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42290299	42290997	.	+	.	ID=comp154815_c0_seq1.mrna1;geneID=comp154815_c0_seq1.path1;Name=comp154815_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.6;matches=670;mismatches=28;indels=3;unknowns=0;Target=comp154815_c0_seq1 700 1 .;CDS_Target=comp154815_c0_seq1 700 635 .;locus=RLOC_00016881
Chr2	stalkie_big_nohaplotig	exon	42290299	42290997	95	+	.	Parent=comp154815_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42290932	42290997	.	+	0	Parent=comp154815_c0_seq1.mrna1
Chr2	gffcl	locus	42315510	42328770	.	-	.	ID=RLOC_00016882;geneIDs=FBgn0042135.1.path1;transcripts=FBgn0042135.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42315510	42328770	.	-	.	ID=FBgn0042135.1.mrna1;geneID=FBgn0042135.1.path1;Name=FBgn0042135.1;Dir=sensecoverage=64.7;identity=99.7;matches=1065;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016882
Chr2	stalkie_big_nohaplotig	exon	42315510	42315610	100	-	.	Parent=FBgn0042135.1.mrna1;Target=FBgn0042135.1 1015 1115 +
Chr2	stalkie_big_nohaplotig	exon	42318629	42318753	100	-	.	Parent=FBgn0042135.1.mrna1;Target=FBgn0042135.1 890 1014 +
Chr2	stalkie_big_nohaplotig	exon	42323431	42323673	99	-	.	Parent=FBgn0042135.1.mrna1;Target=FBgn0042135.1 647 889 +
Chr2	stalkie_big_nohaplotig	exon	42323730	42323839	100	-	.	Parent=FBgn0042135.1.mrna1;Target=FBgn0042135.1 537 646 +
Chr2	stalkie_big_nohaplotig	exon	42327978	42328110	100	-	.	Parent=FBgn0042135.1.mrna1;Target=FBgn0042135.1 404 536 +
Chr2	stalkie_big_nohaplotig	exon	42328203	42328345	100	-	.	Parent=FBgn0042135.1.mrna1;Target=FBgn0042135.1 261 403 +
Chr2	stalkie_big_nohaplotig	exon	42328487	42328638	99	-	.	Parent=FBgn0042135.1.mrna1;Target=FBgn0042135.1 109 260 +
Chr2	stalkie_big_nohaplotig	exon	42328710	42328770	100	-	.	Parent=FBgn0042135.1.mrna1;Target=FBgn0042135.1 48 108 +
Chr2	stalkie_big_nohaplotig	CDS	42315512	42315610	.	-	0	Parent=FBgn0042135.1.mrna1;Target=FBgn0042135.1 1015 1113 +
Chr2	stalkie_big_nohaplotig	CDS	42318629	42318753	.	-	2	Parent=FBgn0042135.1.mrna1;Target=FBgn0042135.1 890 1014 +
Chr2	stalkie_big_nohaplotig	CDS	42323431	42323673	.	-	2	Parent=FBgn0042135.1.mrna1;Target=FBgn0042135.1 647 889 +
Chr2	stalkie_big_nohaplotig	CDS	42323730	42323839	.	-	1	Parent=FBgn0042135.1.mrna1;Target=FBgn0042135.1 537 646 +
Chr2	stalkie_big_nohaplotig	CDS	42327978	42328110	.	-	2	Parent=FBgn0042135.1.mrna1;Target=FBgn0042135.1 404 536 +
Chr2	stalkie_big_nohaplotig	CDS	42328203	42328345	.	-	1	Parent=FBgn0042135.1.mrna1;Target=FBgn0042135.1 261 403 +
Chr2	stalkie_big_nohaplotig	CDS	42328487	42328638	.	-	0	Parent=FBgn0042135.1.mrna1;Target=FBgn0042135.1 109 260 +
Chr2	stalkie_big_nohaplotig	CDS	42328710	42328769	.	-	0	Parent=FBgn0042135.1.mrna1;Target=FBgn0042135.1 49 108 +
Chr2	gffcl	locus	42355531	42356407	.	-	.	ID=RLOC_00016883;geneIDs=comp118614_c0_seq1.path1;transcripts=comp118614_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42355531	42356407	.	-	.	ID=comp118614_c0_seq1.mrna1;geneID=comp118614_c0_seq1.path1;Name=comp118614_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=875;mismatches=2;indels=4;unknowns=0;Target=comp118614_c0_seq1 881 1 .;CDS_Target=comp118614_c0_seq1 505 404 .;locus=RLOC_00016883
Chr2	stalkie_big_nohaplotig	exon	42355531	42356407	99	-	.	Parent=comp118614_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42355903	42356004	.	-	0	Parent=comp118614_c0_seq1.mrna1
Chr2	gffcl	locus	42367582	42369242	.	+	.	ID=RLOC_00016884;geneIDs=comp163270_c1_seq1.path1;transcripts=comp163270_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42367582	42369242	.	+	.	ID=comp163270_c1_seq1.mrna1;geneID=comp163270_c1_seq1.path1;Name=comp163270_c1_seq1;Dir=indeterminatecoverage=69.4;identity=99.2;matches=1655;mismatches=6;indels=8;unknowns=0;Target=comp163270_c1_seq1 2405 737 .;CDS_Target=comp163270_c1_seq1 1347 1330 .;locus=RLOC_00016884
Chr2	stalkie_big_nohaplotig	exon	42367582	42369242	99	+	.	Parent=comp163270_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42368173	42368190	.	+	0	Parent=comp163270_c1_seq1.mrna1
Chr2	gffcl	locus	42369896	42370853	.	-	.	ID=RLOC_00016885;geneIDs=comp150452_c0_seq1.path1;transcripts=comp150452_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42369896	42370853	.	-	.	ID=comp150452_c0_seq1.mrna1;geneID=comp150452_c0_seq1.path1;Name=comp150452_c0_seq1;Dir=indeterminatecoverage=96.5;identity=97.8;matches=939;mismatches=6;indels=15;unknowns=0;Target=comp150452_c0_seq1 952 6 .;CDS_Target=comp150452_c0_seq1 807 679 .;locus=RLOC_00016885
Chr2	stalkie_big_nohaplotig	exon	42369896	42370853	97	-	.	Parent=comp150452_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42370054	42370182	.	-	0	Parent=comp150452_c0_seq1.mrna1
Chr2	gffcl	locus	42371741	42372072	.	-	.	ID=RLOC_00016886;geneIDs=FBgn0004910.1.path2;transcripts=FBgn0004910.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	42371741	42372072	.	-	.	ID=FBgn0004910.1.mrna2;geneID=FBgn0004910.1.path2;Name=FBgn0004910.1;Dir=indeterminatecoverage=49.4;identity=99.4;matches=330;mismatches=2;indels=0;unknowns=0;Target=FBgn0004910.1 672 341 .;locus=RLOC_00016886
Chr2	stalkie_big_nohaplotig	exon	42371741	42372072	99	-	.	Parent=FBgn0004910.1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	42371741	42372072	.	-	1	Parent=FBgn0004910.1.mrna2
Chr2	gffcl	locus	42372086	42525056	.	.	.	ID=RLOC_00016887;geneIDs=FBgn0050497.1.path1,comp146325_c0_seq1.path1;transcripts=FBgn0050497.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42372086	42524355	.	-	.	ID=FBgn0050497.1.mrna1;geneID=FBgn0050497.1.path1;Name=FBgn0050497.1;Dir=sensecoverage=58.3;identity=99.1;matches=1954;mismatches=11;indels=6;unknowns=0;locus=RLOC_00016887
Chr2	stalkie_big_nohaplotig	exon	42372086	42373357	99	-	.	Parent=FBgn0050497.1.mrna1;Target=FBgn0050497.1 2110 3381 +
Chr2	stalkie_big_nohaplotig	exon	42523663	42524355	97	-	.	Parent=FBgn0050497.1.mrna1;Target=FBgn0050497.1 1411 2109 +
Chr2	stalkie_big_nohaplotig	CDS	42372086	42373357	.	-	0	Parent=FBgn0050497.1.mrna1;Target=FBgn0050497.1 2110 3381 +
Chr2	stalkie_big_nohaplotig	CDS	42523663	42524355	.	-	0	Parent=FBgn0050497.1.mrna1;Target=FBgn0050497.1 1411 2109 +
Chr2	gffcl	locus	42525155	42528813	.	-	.	ID=RLOC_00016888;geneIDs=comp147529_c0_seq1.path1;transcripts=comp147529_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42525155	42528813	.	-	.	ID=comp147529_c0_seq1.mrna1;geneID=comp147529_c0_seq1.path1;Name=comp147529_c0_seq1;Dir=antisensecoverage=100.0;identity=99.0;matches=308;mismatches=2;indels=1;unknowns=0;Target=comp147529_c0_seq1 254 310 .;locus=RLOC_00016888
Chr2	stalkie_big_nohaplotig	exon	42525155	42525329	98	-	.	Parent=comp147529_c0_seq1.mrna1;Target=comp147529_c0_seq1 1 174 -
Chr2	stalkie_big_nohaplotig	exon	42528678	42528813	100	-	.	Parent=comp147529_c0_seq1.mrna1;Target=comp147529_c0_seq1 175 310 -
Chr2	stalkie_big_nohaplotig	CDS	42528757	42528813	.	-	0	Parent=comp147529_c0_seq1.mrna1
Chr2	gffcl	locus	42527807	42534438	.	+	.	ID=RLOC_00016889;geneIDs=comp144224_c0_seq1.path1;transcripts=comp144224_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42527807	42534438	.	+	.	ID=comp144224_c0_seq1.mrna1;geneID=comp144224_c0_seq1.path1;Name=comp144224_c0_seq1;Dir=indeterminatecoverage=83.7;identity=94.2;matches=276;mismatches=17;indels=0;unknowns=0;Target=comp144224_c0_seq1 228 103 .;locus=RLOC_00016889
Chr2	stalkie_big_nohaplotig	exon	42527807	42527815	100	+	.	Parent=comp144224_c0_seq1.mrna1;Target=comp144224_c0_seq1 66 58 .
Chr2	stalkie_big_nohaplotig	exon	42531143	42531149	100	+	.	Parent=comp144224_c0_seq1.mrna1;Target=comp144224_c0_seq1 73 67 .
Chr2	stalkie_big_nohaplotig	exon	42534152	42534174	78	+	.	Parent=comp144224_c0_seq1.mrna1;Target=comp144224_c0_seq1 96 74 .
Chr2	stalkie_big_nohaplotig	exon	42534185	42534438	95	+	.	Parent=comp144224_c0_seq1.mrna1;Target=comp144224_c0_seq1 350 97 .
Chr2	stalkie_big_nohaplotig	CDS	42534191	42534316	.	+	0	Parent=comp144224_c0_seq1.mrna1
Chr2	gffcl	locus	42531027	42536710	.	-	.	ID=RLOC_00016890;geneIDs=FBgn0000337.1.path1;transcripts=FBgn0000337.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42531027	42536710	.	-	.	ID=FBgn0000337.1.mrna1;geneID=FBgn0000337.1.path1;Name=FBgn0000337.1;Dir=sensecoverage=99.7;identity=99.5;matches=1366;mismatches=7;indels=0;unknowns=0;locus=RLOC_00016890
Chr2	stalkie_big_nohaplotig	exon	42531027	42531092	98	-	.	Parent=FBgn0000337.1.mrna1;Target=FBgn0000337.1 1312 1377 +
Chr2	stalkie_big_nohaplotig	exon	42531151	42531312	98	-	.	Parent=FBgn0000337.1.mrna1;Target=FBgn0000337.1 1150 1311 +
Chr2	stalkie_big_nohaplotig	exon	42531385	42531615	99	-	.	Parent=FBgn0000337.1.mrna1;Target=FBgn0000337.1 919 1149 +
Chr2	stalkie_big_nohaplotig	exon	42531684	42531935	100	-	.	Parent=FBgn0000337.1.mrna1;Target=FBgn0000337.1 667 918 +
Chr2	stalkie_big_nohaplotig	exon	42532944	42533112	100	-	.	Parent=FBgn0000337.1.mrna1;Target=FBgn0000337.1 498 666 +
Chr2	stalkie_big_nohaplotig	exon	42533171	42533258	100	-	.	Parent=FBgn0000337.1.mrna1;Target=FBgn0000337.1 410 497 +
Chr2	stalkie_big_nohaplotig	exon	42533344	42533653	99	-	.	Parent=FBgn0000337.1.mrna1;Target=FBgn0000337.1 100 409 +
Chr2	stalkie_big_nohaplotig	exon	42536616	42536710	98	-	.	Parent=FBgn0000337.1.mrna1;Target=FBgn0000337.1 5 99 +
Chr2	stalkie_big_nohaplotig	CDS	42531027	42531092	.	-	0	Parent=FBgn0000337.1.mrna1;Target=FBgn0000337.1 1312 1377 +
Chr2	stalkie_big_nohaplotig	CDS	42531151	42531312	.	-	0	Parent=FBgn0000337.1.mrna1;Target=FBgn0000337.1 1150 1311 +
Chr2	stalkie_big_nohaplotig	CDS	42531385	42531615	.	-	0	Parent=FBgn0000337.1.mrna1;Target=FBgn0000337.1 919 1149 +
Chr2	stalkie_big_nohaplotig	CDS	42531684	42531935	.	-	0	Parent=FBgn0000337.1.mrna1;Target=FBgn0000337.1 667 918 +
Chr2	stalkie_big_nohaplotig	CDS	42532944	42533112	.	-	1	Parent=FBgn0000337.1.mrna1;Target=FBgn0000337.1 498 666 +
Chr2	stalkie_big_nohaplotig	CDS	42533171	42533258	.	-	2	Parent=FBgn0000337.1.mrna1;Target=FBgn0000337.1 410 497 +
Chr2	stalkie_big_nohaplotig	CDS	42533344	42533653	.	-	0	Parent=FBgn0000337.1.mrna1;Target=FBgn0000337.1 100 409 +
Chr2	stalkie_big_nohaplotig	CDS	42536616	42536708	.	-	0	Parent=FBgn0000337.1.mrna1;Target=FBgn0000337.1 7 99 +
Chr2	gffcl	locus	42541928	42543169	.	-	.	ID=RLOC_00016891;geneIDs=FBgn0033389.1.path1;transcripts=FBgn0033389.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42541928	42543169	.	-	.	ID=FBgn0033389.1.mrna1;geneID=FBgn0033389.1.path1;Name=FBgn0033389.1;Dir=sensecoverage=100.0;identity=99.5;matches=1039;mismatches=5;indels=0;unknowns=0;locus=RLOC_00016891
Chr2	stalkie_big_nohaplotig	exon	42541928	42542181	99	-	.	Parent=FBgn0033389.1.mrna1;Target=FBgn0033389.1 791 1044 +
Chr2	stalkie_big_nohaplotig	exon	42542265	42542381	99	-	.	Parent=FBgn0033389.1.mrna1;Target=FBgn0033389.1 674 790 +
Chr2	stalkie_big_nohaplotig	exon	42542440	42542834	99	-	.	Parent=FBgn0033389.1.mrna1;Target=FBgn0033389.1 279 673 +
Chr2	stalkie_big_nohaplotig	exon	42542892	42543169	99	-	.	Parent=FBgn0033389.1.mrna1;Target=FBgn0033389.1 1 278 +
Chr2	stalkie_big_nohaplotig	CDS	42541928	42542181	.	-	2	Parent=FBgn0033389.1.mrna1;Target=FBgn0033389.1 791 1044 +
Chr2	stalkie_big_nohaplotig	CDS	42542265	42542381	.	-	2	Parent=FBgn0033389.1.mrna1;Target=FBgn0033389.1 674 790 +
Chr2	stalkie_big_nohaplotig	CDS	42542440	42542834	.	-	1	Parent=FBgn0033389.1.mrna1;Target=FBgn0033389.1 279 673 +
Chr2	stalkie_big_nohaplotig	CDS	42542892	42543169	.	-	0	Parent=FBgn0033389.1.mrna1;Target=FBgn0033389.1 1 278 +
Chr2	gffcl	locus	42546254	42547195	.	+	.	ID=RLOC_00016892;geneIDs=FBgn0035035.1.path1;transcripts=FBgn0035035.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42546254	42547195	.	+	.	ID=FBgn0035035.1.mrna1;geneID=FBgn0035035.1.path1;Name=FBgn0035035.1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=924;mismatches=18;indels=0;unknowns=0;Target=FBgn0035035.1 942 1 .;locus=RLOC_00016892
Chr2	stalkie_big_nohaplotig	exon	42546254	42547195	98	+	.	Parent=FBgn0035035.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42546254	42547195	.	+	0	Parent=FBgn0035035.1.mrna1
Chr2	gffcl	locus	42547453	42549442	.	-	.	ID=RLOC_00016893;geneIDs=FBgn0035036.2.path1;transcripts=FBgn0035036.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42547453	42549442	.	-	.	ID=FBgn0035036.2.mrna1;geneID=FBgn0035036.2.path1;Name=FBgn0035036.2;Dir=sensecoverage=100.0;identity=99.6;matches=1497;mismatches=4;indels=2;unknowns=0;Target=FBgn0035036.2 3 86 +;locus=RLOC_00016893
Chr2	stalkie_big_nohaplotig	exon	42547453	42547703	99	-	.	Parent=FBgn0035036.2.mrna1;Target=FBgn0035036.2 1252 1503 +
Chr2	stalkie_big_nohaplotig	exon	42548128	42548518	99	-	.	Parent=FBgn0035036.2.mrna1;Target=FBgn0035036.2 861 1251 +
Chr2	stalkie_big_nohaplotig	exon	42548584	42549442	99	-	.	Parent=FBgn0035036.2.mrna1;Target=FBgn0035036.2 1 860 +
Chr2	stalkie_big_nohaplotig	CDS	42549358	42549440	.	-	0	Parent=FBgn0035036.2.mrna1
Chr2	gffcl	locus	42552769	42554012	.	-	.	ID=RLOC_00016894;geneIDs=comp153097_c0_seq1.path1;transcripts=comp153097_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42552769	42554012	.	-	.	ID=comp153097_c0_seq1.mrna1;geneID=comp153097_c0_seq1.path1;Name=comp153097_c0_seq1;Dir=antisensecoverage=98.4;identity=99.2;matches=1052;mismatches=7;indels=1;unknowns=0;locus=RLOC_00016894
Chr2	stalkie_big_nohaplotig	exon	42552769	42553351	99	-	.	Parent=comp153097_c0_seq1.mrna1;Target=comp153097_c0_seq1 13 595 -
Chr2	stalkie_big_nohaplotig	exon	42553409	42553565	99	-	.	Parent=comp153097_c0_seq1.mrna1;Target=comp153097_c0_seq1 596 752 -
Chr2	stalkie_big_nohaplotig	exon	42553619	42553786	98	-	.	Parent=comp153097_c0_seq1.mrna1;Target=comp153097_c0_seq1 753 920 -
Chr2	stalkie_big_nohaplotig	exon	42553862	42554012	99	-	.	Parent=comp153097_c0_seq1.mrna1;Target=comp153097_c0_seq1 921 1072 -
Chr2	stalkie_big_nohaplotig	CDS	42552988	42553351	.	-	1	Parent=comp153097_c0_seq1.mrna1;Target=comp153097_c0_seq1 232 595 .
Chr2	stalkie_big_nohaplotig	CDS	42553409	42553565	.	-	2	Parent=comp153097_c0_seq1.mrna1;Target=comp153097_c0_seq1 596 752 .
Chr2	stalkie_big_nohaplotig	CDS	42553619	42553786	.	-	2	Parent=comp153097_c0_seq1.mrna1;Target=comp153097_c0_seq1 753 920 .
Chr2	stalkie_big_nohaplotig	CDS	42553862	42553910	.	-	0	Parent=comp153097_c0_seq1.mrna1;Target=comp153097_c0_seq1 921 969 .
Chr2	gffcl	locus	42558233	42563486	.	.	.	ID=RLOC_00016895;geneIDs=FBgn0034276.1.path1,comp152515_c0_seq1.path1;transcripts=FBgn0034276.1.mrna1,comp152515_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42558233	42563486	.	-	.	ID=FBgn0034276.1.mrna1;geneID=FBgn0034276.1.path1;Name=FBgn0034276.1;Dir=sensecoverage=100.0;identity=99.9;matches=2708;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016895
Chr2	stalkie_big_nohaplotig	exon	42558233	42559187	99	-	.	Parent=FBgn0034276.1.mrna1;Target=FBgn0034276.1 1758 2712 +
Chr2	stalkie_big_nohaplotig	exon	42560518	42560660	100	-	.	Parent=FBgn0034276.1.mrna1;Target=FBgn0034276.1 1615 1757 +
Chr2	stalkie_big_nohaplotig	exon	42560765	42561955	100	-	.	Parent=FBgn0034276.1.mrna1;Target=FBgn0034276.1 424 1614 +
Chr2	stalkie_big_nohaplotig	exon	42563064	42563486	100	-	.	Parent=FBgn0034276.1.mrna1;Target=FBgn0034276.1 1 423 +
Chr2	stalkie_big_nohaplotig	CDS	42558233	42559187	.	-	1	Parent=FBgn0034276.1.mrna1;Target=FBgn0034276.1 1758 2712 +
Chr2	stalkie_big_nohaplotig	CDS	42560518	42560660	.	-	0	Parent=FBgn0034276.1.mrna1;Target=FBgn0034276.1 1615 1757 +
Chr2	stalkie_big_nohaplotig	CDS	42560765	42561955	.	-	0	Parent=FBgn0034276.1.mrna1;Target=FBgn0034276.1 424 1614 +
Chr2	stalkie_big_nohaplotig	CDS	42563064	42563486	.	-	0	Parent=FBgn0034276.1.mrna1;Target=FBgn0034276.1 1 423 +
Chr2	stalkie_big_nohaplotig	mRNA	42559165	42560193	.	+	.	ID=comp152515_c0_seq1.mrna1;geneID=comp152515_c0_seq1.path1;Name=comp152515_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.0;matches=982;mismatches=21;indels=53;unknowns=0;Target=comp152515_c0_seq1 1030 1 .;CDS_Target=comp152515_c0_seq1 339 205 .;locus=RLOC_00016895
Chr2	stalkie_big_nohaplotig	exon	42559165	42560193	92	+	.	Parent=comp152515_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42559369	42559477	.	+	0	Parent=comp152515_c0_seq1.mrna1
Chr2	gffcl	locus	42566814	42574050	.	+	.	ID=RLOC_00016896;geneIDs=FBgn0022740.1.path1;transcripts=FBgn0022740.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42566814	42574050	.	+	.	ID=FBgn0022740.1.mrna1;geneID=FBgn0022740.1.path1;Name=FBgn0022740.1;Dir=sensecoverage=100.0;identity=99.1;matches=764;mismatches=7;indels=0;unknowns=0;locus=RLOC_00016896
Chr2	stalkie_big_nohaplotig	exon	42566814	42566928	100	+	.	Parent=FBgn0022740.1.mrna1;Target=FBgn0022740.1 1 115 +
Chr2	stalkie_big_nohaplotig	exon	42568767	42569053	99	+	.	Parent=FBgn0022740.1.mrna1;Target=FBgn0022740.1 116 402 +
Chr2	stalkie_big_nohaplotig	exon	42573682	42574050	98	+	.	Parent=FBgn0022740.1.mrna1;Target=FBgn0022740.1 403 771 +
Chr2	stalkie_big_nohaplotig	CDS	42566814	42566928	.	+	0	Parent=FBgn0022740.1.mrna1;Target=FBgn0022740.1 1 115 +
Chr2	stalkie_big_nohaplotig	CDS	42568767	42569053	.	+	2	Parent=FBgn0022740.1.mrna1;Target=FBgn0022740.1 116 402 +
Chr2	stalkie_big_nohaplotig	CDS	42573682	42574050	.	+	0	Parent=FBgn0022740.1.mrna1;Target=FBgn0022740.1 403 771 +
Chr2	gffcl	locus	42579652	42590378	.	-	.	ID=RLOC_00016897;geneIDs=FBgn0264294.1.path1;transcripts=FBgn0264294.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42579652	42590378	.	-	.	ID=FBgn0264294.1.mrna1;geneID=FBgn0264294.1.path1;Name=FBgn0264294.1;Dir=sensecoverage=100.0;identity=99.5;matches=442;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016897
Chr2	stalkie_big_nohaplotig	exon	42579652	42579933	99	-	.	Parent=FBgn0264294.1.mrna1;Target=FBgn0264294.1 163 444 +
Chr2	stalkie_big_nohaplotig	exon	42590217	42590378	99	-	.	Parent=FBgn0264294.1.mrna1;Target=FBgn0264294.1 1 162 +
Chr2	stalkie_big_nohaplotig	CDS	42579652	42579933	.	-	0	Parent=FBgn0264294.1.mrna1;Target=FBgn0264294.1 163 444 +
Chr2	stalkie_big_nohaplotig	CDS	42590217	42590378	.	-	0	Parent=FBgn0264294.1.mrna1;Target=FBgn0264294.1 1 162 +
Chr2	gffcl	locus	42592505	42594144	.	-	.	ID=RLOC_00016898;geneIDs=FBgn0032204.1.path1;transcripts=FBgn0032204.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42592505	42594144	.	-	.	ID=FBgn0032204.1.mrna1;geneID=FBgn0032204.1.path1;Name=FBgn0032204.1;Dir=sensecoverage=100.0;identity=98.7;matches=1331;mismatches=13;indels=5;unknowns=0;locus=RLOC_00016898
Chr2	stalkie_big_nohaplotig	exon	42592505	42592948	99	-	.	Parent=FBgn0032204.1.mrna1;Target=FBgn0032204.1 901 1344 +
Chr2	stalkie_big_nohaplotig	exon	42593011	42593139	100	-	.	Parent=FBgn0032204.1.mrna1;Target=FBgn0032204.1 772 900 +
Chr2	stalkie_big_nohaplotig	exon	42593203	42593370	98	-	.	Parent=FBgn0032204.1.mrna1;Target=FBgn0032204.1 604 771 +
Chr2	stalkie_big_nohaplotig	exon	42593424	42593573	96	-	.	Parent=FBgn0032204.1.mrna1;Target=FBgn0032204.1 459 603 +
Chr2	stalkie_big_nohaplotig	exon	42593626	42594013	98	-	.	Parent=FBgn0032204.1.mrna1;Target=FBgn0032204.1 71 458 +
Chr2	stalkie_big_nohaplotig	exon	42594075	42594144	95	-	.	Parent=FBgn0032204.1.mrna1;Target=FBgn0032204.1 1 70 +
Chr2	stalkie_big_nohaplotig	CDS	42592505	42592948	.	-	0	Parent=FBgn0032204.1.mrna1;Target=FBgn0032204.1 901 1344 +
Chr2	stalkie_big_nohaplotig	CDS	42593011	42593139	.	-	0	Parent=FBgn0032204.1.mrna1;Target=FBgn0032204.1 772 900 +
Chr2	stalkie_big_nohaplotig	CDS	42593203	42593370	.	-	0	Parent=FBgn0032204.1.mrna1;Target=FBgn0032204.1 604 771 +
Chr2	stalkie_big_nohaplotig	CDS	42593424	42593450	.	-	0	Parent=FBgn0032204.1.mrna1;Target=FBgn0032204.1 577 603 +
Chr2	gffcl	locus	42622907	42627181	.	+	.	ID=RLOC_00016900;geneIDs=FBgn0022772.1.path1;transcripts=FBgn0022772.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42622907	42627181	.	+	.	ID=FBgn0022772.1.mrna1;geneID=FBgn0022772.1.path1;Name=FBgn0022772.1;Dir=sensecoverage=100.0;identity=98.9;matches=2755;mismatches=32;indels=0;unknowns=0;locus=RLOC_00016900
Chr2	stalkie_big_nohaplotig	exon	42622907	42624018	99	+	.	Parent=FBgn0022772.1.mrna1;Target=FBgn0022772.1 1 1112 +
Chr2	stalkie_big_nohaplotig	exon	42624099	42624337	99	+	.	Parent=FBgn0022772.1.mrna1;Target=FBgn0022772.1 1113 1351 +
Chr2	stalkie_big_nohaplotig	exon	42624404	42625237	98	+	.	Parent=FBgn0022772.1.mrna1;Target=FBgn0022772.1 1352 2185 +
Chr2	stalkie_big_nohaplotig	exon	42625304	42625439	98	+	.	Parent=FBgn0022772.1.mrna1;Target=FBgn0022772.1 2186 2321 +
Chr2	stalkie_big_nohaplotig	exon	42626652	42626974	98	+	.	Parent=FBgn0022772.1.mrna1;Target=FBgn0022772.1 2322 2644 +
Chr2	stalkie_big_nohaplotig	exon	42627039	42627181	98	+	.	Parent=FBgn0022772.1.mrna1;Target=FBgn0022772.1 2645 2787 +
Chr2	stalkie_big_nohaplotig	CDS	42622907	42624018	.	+	0	Parent=FBgn0022772.1.mrna1;Target=FBgn0022772.1 1 1112 +
Chr2	stalkie_big_nohaplotig	CDS	42624099	42624337	.	+	1	Parent=FBgn0022772.1.mrna1;Target=FBgn0022772.1 1113 1351 +
Chr2	stalkie_big_nohaplotig	CDS	42624404	42625237	.	+	2	Parent=FBgn0022772.1.mrna1;Target=FBgn0022772.1 1352 2185 +
Chr2	stalkie_big_nohaplotig	CDS	42625304	42625439	.	+	2	Parent=FBgn0022772.1.mrna1;Target=FBgn0022772.1 2186 2321 +
Chr2	stalkie_big_nohaplotig	CDS	42626652	42626974	.	+	1	Parent=FBgn0022772.1.mrna1;Target=FBgn0022772.1 2322 2644 +
Chr2	stalkie_big_nohaplotig	CDS	42627039	42627181	.	+	2	Parent=FBgn0022772.1.mrna1;Target=FBgn0022772.1 2645 2787 +
Chr2	gffcl	locus	42632234	42633981	.	+	.	ID=RLOC_00016901;geneIDs=FBgn0033184.1.path1;transcripts=FBgn0033184.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42632234	42633981	.	+	.	ID=FBgn0033184.1.mrna1;geneID=FBgn0033184.1.path1;Name=FBgn0033184.1;Dir=sensecoverage=100.0;identity=99.3;matches=1365;mismatches=9;indels=0;unknowns=0;locus=RLOC_00016901
Chr2	stalkie_big_nohaplotig	exon	42632234	42632555	99	+	.	Parent=FBgn0033184.1.mrna1;Target=FBgn0033184.1 1 322 +
Chr2	stalkie_big_nohaplotig	exon	42632612	42632703	100	+	.	Parent=FBgn0033184.1.mrna1;Target=FBgn0033184.1 323 414 +
Chr2	stalkie_big_nohaplotig	exon	42632888	42633424	99	+	.	Parent=FBgn0033184.1.mrna1;Target=FBgn0033184.1 415 951 +
Chr2	stalkie_big_nohaplotig	exon	42633487	42633715	99	+	.	Parent=FBgn0033184.1.mrna1;Target=FBgn0033184.1 952 1180 +
Chr2	stalkie_big_nohaplotig	exon	42633788	42633981	99	+	.	Parent=FBgn0033184.1.mrna1;Target=FBgn0033184.1 1181 1374 +
Chr2	stalkie_big_nohaplotig	CDS	42632234	42632555	.	+	0	Parent=FBgn0033184.1.mrna1;Target=FBgn0033184.1 1 322 +
Chr2	stalkie_big_nohaplotig	CDS	42632612	42632703	.	+	2	Parent=FBgn0033184.1.mrna1;Target=FBgn0033184.1 323 414 +
Chr2	stalkie_big_nohaplotig	CDS	42632888	42633424	.	+	0	Parent=FBgn0033184.1.mrna1;Target=FBgn0033184.1 415 951 +
Chr2	stalkie_big_nohaplotig	CDS	42633487	42633715	.	+	0	Parent=FBgn0033184.1.mrna1;Target=FBgn0033184.1 952 1180 +
Chr2	stalkie_big_nohaplotig	CDS	42633788	42633981	.	+	2	Parent=FBgn0033184.1.mrna1;Target=FBgn0033184.1 1181 1374 +
Chr2	gffcl	locus	42651553	42654633	.	+	.	ID=RLOC_00016903;geneIDs=FBgn0015929.1.path1;transcripts=FBgn0015929.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42651553	42654633	.	+	.	ID=FBgn0015929.1.mrna1;geneID=FBgn0015929.1.path1;Name=FBgn0015929.1;Dir=sensecoverage=100.0;identity=99.3;matches=2539;mismatches=17;indels=0;unknowns=0;locus=RLOC_00016903
Chr2	stalkie_big_nohaplotig	exon	42651553	42651601	95	+	.	Parent=FBgn0015929.1.mrna1;Target=FBgn0015929.1 1 49 +
Chr2	stalkie_big_nohaplotig	exon	42651658	42651959	99	+	.	Parent=FBgn0015929.1.mrna1;Target=FBgn0015929.1 50 351 +
Chr2	stalkie_big_nohaplotig	exon	42652013	42652932	99	+	.	Parent=FBgn0015929.1.mrna1;Target=FBgn0015929.1 352 1271 +
Chr2	stalkie_big_nohaplotig	exon	42652991	42653185	100	+	.	Parent=FBgn0015929.1.mrna1;Target=FBgn0015929.1 1272 1466 +
Chr2	stalkie_big_nohaplotig	exon	42653246	42653422	97	+	.	Parent=FBgn0015929.1.mrna1;Target=FBgn0015929.1 1467 1643 +
Chr2	stalkie_big_nohaplotig	exon	42653490	42653856	99	+	.	Parent=FBgn0015929.1.mrna1;Target=FBgn0015929.1 1644 2010 +
Chr2	stalkie_big_nohaplotig	exon	42653912	42654153	100	+	.	Parent=FBgn0015929.1.mrna1;Target=FBgn0015929.1 2011 2252 +
Chr2	stalkie_big_nohaplotig	exon	42654214	42654424	99	+	.	Parent=FBgn0015929.1.mrna1;Target=FBgn0015929.1 2253 2463 +
Chr2	stalkie_big_nohaplotig	exon	42654541	42654633	98	+	.	Parent=FBgn0015929.1.mrna1;Target=FBgn0015929.1 2464 2556 +
Chr2	stalkie_big_nohaplotig	CDS	42651553	42651601	.	+	0	Parent=FBgn0015929.1.mrna1;Target=FBgn0015929.1 1 49 +
Chr2	stalkie_big_nohaplotig	CDS	42651658	42651959	.	+	2	Parent=FBgn0015929.1.mrna1;Target=FBgn0015929.1 50 351 +
Chr2	stalkie_big_nohaplotig	CDS	42652013	42652932	.	+	0	Parent=FBgn0015929.1.mrna1;Target=FBgn0015929.1 352 1271 +
Chr2	stalkie_big_nohaplotig	CDS	42652991	42653185	.	+	1	Parent=FBgn0015929.1.mrna1;Target=FBgn0015929.1 1272 1466 +
Chr2	stalkie_big_nohaplotig	CDS	42653246	42653422	.	+	1	Parent=FBgn0015929.1.mrna1;Target=FBgn0015929.1 1467 1643 +
Chr2	stalkie_big_nohaplotig	CDS	42653490	42653856	.	+	1	Parent=FBgn0015929.1.mrna1;Target=FBgn0015929.1 1644 2010 +
Chr2	stalkie_big_nohaplotig	CDS	42653912	42654153	.	+	0	Parent=FBgn0015929.1.mrna1;Target=FBgn0015929.1 2011 2252 +
Chr2	stalkie_big_nohaplotig	CDS	42654214	42654424	.	+	1	Parent=FBgn0015929.1.mrna1;Target=FBgn0015929.1 2253 2463 +
Chr2	stalkie_big_nohaplotig	CDS	42654541	42654633	.	+	0	Parent=FBgn0015929.1.mrna1;Target=FBgn0015929.1 2464 2556 +
Chr2	gffcl	locus	42656166	42658151	.	+	.	ID=RLOC_00016904;geneIDs=FBgn0033183.1.path1;transcripts=FBgn0033183.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42656166	42658151	.	+	.	ID=FBgn0033183.1.mrna1;geneID=FBgn0033183.1.path1;Name=FBgn0033183.1;Dir=sensecoverage=100.0;identity=99.3;matches=1797;mismatches=12;indels=0;unknowns=0;locus=RLOC_00016904
Chr2	stalkie_big_nohaplotig	exon	42656166	42656247	100	+	.	Parent=FBgn0033183.1.mrna1;Target=FBgn0033183.1 1 82 +
Chr2	stalkie_big_nohaplotig	exon	42656314	42657054	98	+	.	Parent=FBgn0033183.1.mrna1;Target=FBgn0033183.1 83 823 +
Chr2	stalkie_big_nohaplotig	exon	42657113	42657723	99	+	.	Parent=FBgn0033183.1.mrna1;Target=FBgn0033183.1 824 1434 +
Chr2	stalkie_big_nohaplotig	exon	42657777	42658151	99	+	.	Parent=FBgn0033183.1.mrna1;Target=FBgn0033183.1 1435 1809 +
Chr2	stalkie_big_nohaplotig	CDS	42656166	42656247	.	+	0	Parent=FBgn0033183.1.mrna1;Target=FBgn0033183.1 1 82 +
Chr2	stalkie_big_nohaplotig	CDS	42656314	42657054	.	+	2	Parent=FBgn0033183.1.mrna1;Target=FBgn0033183.1 83 823 +
Chr2	stalkie_big_nohaplotig	CDS	42657113	42657723	.	+	2	Parent=FBgn0033183.1.mrna1;Target=FBgn0033183.1 824 1434 +
Chr2	stalkie_big_nohaplotig	CDS	42657777	42658151	.	+	0	Parent=FBgn0033183.1.mrna1;Target=FBgn0033183.1 1435 1809 +
Chr2	gffcl	locus	42674202	42674861	.	+	.	ID=RLOC_00016906;geneIDs=comp153661_c0_seq1.path1;transcripts=comp153661_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42674202	42674861	.	+	.	ID=comp153661_c0_seq1.mrna1;geneID=comp153661_c0_seq1.path1;Name=comp153661_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.3;matches=650;mismatches=10;indels=8;unknowns=0;Target=comp153661_c0_seq1 668 1 .;CDS_Target=comp153661_c0_seq1 552 451 .;locus=RLOC_00016906
Chr2	stalkie_big_nohaplotig	exon	42674202	42674861	97	+	.	Parent=comp153661_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42674644	42674745	.	+	0	Parent=comp153661_c0_seq1.mrna1
Chr2	gffcl	locus	42687261	42691367	.	+	.	ID=RLOC_00016907;geneIDs=comp148447_c0_seq1.path1;transcripts=comp148447_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42687261	42691367	.	+	.	ID=comp148447_c0_seq1.mrna1;geneID=comp148447_c0_seq1.path1;Name=comp148447_c0_seq1;Dir=sensecoverage=97.6;identity=99.2;matches=925;mismatches=7;indels=0;unknowns=0;Target=comp148447_c0_seq1 214 363 +;locus=RLOC_00016907
Chr2	stalkie_big_nohaplotig	exon	42687261	42688054	99	+	.	Parent=comp148447_c0_seq1.mrna1;Target=comp148447_c0_seq1 1 794 +
Chr2	stalkie_big_nohaplotig	exon	42691158	42691238	97	+	.	Parent=comp148447_c0_seq1.mrna1;Target=comp148447_c0_seq1 795 875 +
Chr2	stalkie_big_nohaplotig	exon	42691311	42691367	96	+	.	Parent=comp148447_c0_seq1.mrna1;Target=comp148447_c0_seq1 876 932 +
Chr2	stalkie_big_nohaplotig	CDS	42687474	42687623	.	+	0	Parent=comp148447_c0_seq1.mrna1
Chr2	gffcl	locus	42697493	42699226	.	+	.	ID=RLOC_00016908;geneIDs=FBgn0032848.1.path1;transcripts=FBgn0032848.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42697493	42699226	.	+	.	ID=FBgn0032848.1.mrna1;geneID=FBgn0032848.1.path1;Name=FBgn0032848.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1723;mismatches=11;indels=0;unknowns=0;Target=FBgn0032848.1 1734 1 .;locus=RLOC_00016908
Chr2	stalkie_big_nohaplotig	exon	42697493	42699226	99	+	.	Parent=FBgn0032848.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42697493	42699226	.	+	0	Parent=FBgn0032848.1.mrna1
Chr2	gffcl	locus	42701336	42715797	.	.	.	ID=RLOC_00016909;geneIDs=FBgn0010548.1.path1,comp115479_c0_seq1.path1,comp116707_c0_seq1.path1,comp118235_c0_seq1.path1,comp151536_c0_seq1.path1,comp239127_c0_seq1.path1;transcripts=FBgn0010548.1.mrna1,comp239127_c0_seq1.mrna1,comp151536_c0_seq1.mrna1,comp118235_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42701336	42715797	.	+	.	ID=FBgn0010548.1.mrna1;geneID=FBgn0010548.1.path1;Name=FBgn0010548.1;Dir=sensecoverage=100.0;identity=99.9;matches=1547;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016909
Chr2	stalkie_big_nohaplotig	exon	42701336	42701357	100	+	.	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 1 22 +
Chr2	stalkie_big_nohaplotig	exon	42701416	42701456	100	+	.	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 23 63 +
Chr2	stalkie_big_nohaplotig	exon	42701577	42701635	100	+	.	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 64 122 +
Chr2	stalkie_big_nohaplotig	exon	42708471	42708651	100	+	.	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 123 303 +
Chr2	stalkie_big_nohaplotig	exon	42708713	42708934	100	+	.	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 304 525 +
Chr2	stalkie_big_nohaplotig	exon	42710301	42710464	100	+	.	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 526 689 +
Chr2	stalkie_big_nohaplotig	exon	42710532	42710762	100	+	.	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 690 920 +
Chr2	stalkie_big_nohaplotig	exon	42710822	42711022	100	+	.	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 921 1121 +
Chr2	stalkie_big_nohaplotig	exon	42713508	42713623	100	+	.	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 1122 1237 +
Chr2	stalkie_big_nohaplotig	exon	42715316	42715451	100	+	.	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 1238 1373 +
Chr2	stalkie_big_nohaplotig	exon	42715522	42715672	99	+	.	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 1374 1524 +
Chr2	stalkie_big_nohaplotig	exon	42715774	42715797	100	+	.	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 1525 1548 +
Chr2	stalkie_big_nohaplotig	CDS	42701336	42701357	.	+	0	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 1 22 +
Chr2	stalkie_big_nohaplotig	CDS	42701416	42701456	.	+	2	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 23 63 +
Chr2	stalkie_big_nohaplotig	CDS	42701577	42701635	.	+	0	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 64 122 +
Chr2	stalkie_big_nohaplotig	CDS	42708471	42708651	.	+	1	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 123 303 +
Chr2	stalkie_big_nohaplotig	CDS	42708713	42708934	.	+	0	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 304 525 +
Chr2	stalkie_big_nohaplotig	CDS	42710301	42710464	.	+	0	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 526 689 +
Chr2	stalkie_big_nohaplotig	CDS	42710532	42710762	.	+	1	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 690 920 +
Chr2	stalkie_big_nohaplotig	CDS	42710822	42711022	.	+	1	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 921 1121 +
Chr2	stalkie_big_nohaplotig	CDS	42713508	42713623	.	+	1	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 1122 1237 +
Chr2	stalkie_big_nohaplotig	CDS	42715316	42715451	.	+	2	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 1238 1373 +
Chr2	stalkie_big_nohaplotig	CDS	42715522	42715672	.	+	1	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 1374 1524 +
Chr2	stalkie_big_nohaplotig	CDS	42715774	42715797	.	+	0	Parent=FBgn0010548.1.mrna1;Target=FBgn0010548.1 1525 1548 +
Chr2	stalkie_big_nohaplotig	mRNA	42711000	42711424	.	+	.	ID=comp239127_c0_seq1.mrna1;geneID=comp239127_c0_seq1.path1;Name=comp239127_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=424;mismatches=1;indels=0;unknowns=0;Target=comp239127_c0_seq1 425 1 .;CDS_Target=comp239127_c0_seq1 302 213 .;locus=RLOC_00016909
Chr2	stalkie_big_nohaplotig	exon	42711000	42711424	99	+	.	Parent=comp239127_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42711212	42711301	.	+	0	Parent=comp239127_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42712496	42713207	.	-	.	ID=comp151536_c0_seq1.mrna1;geneID=comp151536_c0_seq1.path1;Name=comp151536_c0_seq1;Dir=indeterminatecoverage=93.7;identity=97.5;matches=694;mismatches=14;indels=4;unknowns=0;Target=comp151536_c0_seq1 756 49 .;CDS_Target=comp151536_c0_seq1 91 50 .;locus=RLOC_00016909
Chr2	stalkie_big_nohaplotig	exon	42712496	42713207	97	-	.	Parent=comp151536_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42713165	42713206	.	-	0	Parent=comp151536_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42713600	42713863	.	-	.	ID=comp118235_c0_seq1.mrna1;geneID=comp118235_c0_seq1.path1;Name=comp118235_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=263;mismatches=1;indels=0;unknowns=0;Target=comp118235_c0_seq1 264 1 .;CDS_Target=comp118235_c0_seq1 112 56 .;locus=RLOC_00016909
Chr2	stalkie_big_nohaplotig	exon	42713600	42713863	99	-	.	Parent=comp118235_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42713752	42713808	.	-	0	Parent=comp118235_c0_seq1.mrna1
Chr2	gffcl	locus	42714550	42714831	.	+	.	ID=RLOC_00016910;geneIDs=comp155697_c0_seq1.path1;transcripts=comp155697_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42714550	42714831	.	+	.	ID=comp155697_c0_seq1.mrna1;geneID=comp155697_c0_seq1.path1;Name=comp155697_c0_seq1;Dir=indeterminatecoverage=26.6;identity=98.2;matches=278;mismatches=4;indels=1;unknowns=0;Target=comp155697_c0_seq1 1065 783 .;CDS_Target=comp155697_c0_seq1 907 785 .;locus=RLOC_00016910
Chr2	stalkie_big_nohaplotig	exon	42714550	42714831	98	+	.	Parent=comp155697_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42714552	42714674	.	+	0	Parent=comp155697_c0_seq1.mrna1
Chr2	gffcl	locus	42718529	42723147	.	-	.	ID=RLOC_00016911;geneIDs=FBgn0033178.1.path1,FBgn0034707.1.path1;transcripts=FBgn0033178.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42720871	42723147	.	-	.	ID=FBgn0033178.1.mrna1;geneID=FBgn0033178.1.path1;Name=FBgn0033178.1;Dir=antisensecoverage=100.0;identity=99.1;matches=1372;mismatches=11;indels=1;unknowns=0;Target=FBgn0033178.1 1260 1382 .;locus=RLOC_00016911
Chr2	stalkie_big_nohaplotig	exon	42720871	42720891	100	-	.	Parent=FBgn0033178.1.mrna1;Target=FBgn0033178.1 1 21 -
Chr2	stalkie_big_nohaplotig	exon	42721785	42723147	99	-	.	Parent=FBgn0033178.1.mrna1;Target=FBgn0033178.1 22 1383 -
Chr2	stalkie_big_nohaplotig	CDS	42723024	42723146	.	-	0	Parent=FBgn0033178.1.mrna1
Chr2	gffcl	locus	42724030	42725697	.	-	.	ID=RLOC_00016912;geneIDs=FBgn0033179.1.path1;transcripts=FBgn0033179.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42724030	42725697	.	-	.	ID=FBgn0033179.1.mrna1;geneID=FBgn0033179.1.path1;Name=FBgn0033179.1;Dir=sensecoverage=100.0;identity=100.0;matches=1215;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016912
Chr2	stalkie_big_nohaplotig	exon	42724030	42724159	100	-	.	Parent=FBgn0033179.1.mrna1;Target=FBgn0033179.1 1086 1215 +
Chr2	stalkie_big_nohaplotig	exon	42724237	42724452	100	-	.	Parent=FBgn0033179.1.mrna1;Target=FBgn0033179.1 870 1085 +
Chr2	stalkie_big_nohaplotig	exon	42724521	42724649	100	-	.	Parent=FBgn0033179.1.mrna1;Target=FBgn0033179.1 741 869 +
Chr2	stalkie_big_nohaplotig	exon	42724705	42725112	100	-	.	Parent=FBgn0033179.1.mrna1;Target=FBgn0033179.1 333 740 +
Chr2	stalkie_big_nohaplotig	exon	42725311	42725471	100	-	.	Parent=FBgn0033179.1.mrna1;Target=FBgn0033179.1 172 332 +
Chr2	stalkie_big_nohaplotig	exon	42725527	42725697	100	-	.	Parent=FBgn0033179.1.mrna1;Target=FBgn0033179.1 1 171 +
Chr2	stalkie_big_nohaplotig	CDS	42724030	42724159	.	-	1	Parent=FBgn0033179.1.mrna1;Target=FBgn0033179.1 1086 1215 +
Chr2	stalkie_big_nohaplotig	CDS	42724237	42724452	.	-	1	Parent=FBgn0033179.1.mrna1;Target=FBgn0033179.1 870 1085 +
Chr2	stalkie_big_nohaplotig	CDS	42724521	42724649	.	-	1	Parent=FBgn0033179.1.mrna1;Target=FBgn0033179.1 741 869 +
Chr2	stalkie_big_nohaplotig	CDS	42724705	42725112	.	-	1	Parent=FBgn0033179.1.mrna1;Target=FBgn0033179.1 333 740 +
Chr2	stalkie_big_nohaplotig	CDS	42725311	42725471	.	-	0	Parent=FBgn0033179.1.mrna1;Target=FBgn0033179.1 172 332 +
Chr2	stalkie_big_nohaplotig	CDS	42725527	42725697	.	-	0	Parent=FBgn0033179.1.mrna1;Target=FBgn0033179.1 1 171 +
Chr2	gffcl	locus	42728796	42731287	.	+	.	ID=RLOC_00016913;geneIDs=FBgn0027548.1.path1;transcripts=FBgn0027548.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42728796	42731287	.	+	.	ID=FBgn0027548.1.mrna1;geneID=FBgn0027548.1.path1;Name=FBgn0027548.1;Dir=sensecoverage=100.0;identity=99.7;matches=2415;mismatches=8;indels=0;unknowns=0;locus=RLOC_00016913
Chr2	stalkie_big_nohaplotig	exon	42728796	42729393	99	+	.	Parent=FBgn0027548.1.mrna1;Target=FBgn0027548.1 2 599 +
Chr2	stalkie_big_nohaplotig	exon	42729463	42731287	99	+	.	Parent=FBgn0027548.1.mrna1;Target=FBgn0027548.1 600 2424 +
Chr2	stalkie_big_nohaplotig	CDS	42728798	42729393	.	+	0	Parent=FBgn0027548.1.mrna1;Target=FBgn0027548.1 4 599 +
Chr2	stalkie_big_nohaplotig	CDS	42729463	42731287	.	+	1	Parent=FBgn0027548.1.mrna1;Target=FBgn0027548.1 600 2424 +
Chr2	gffcl	locus	42732963	42738000	.	-	.	ID=RLOC_00016914;geneIDs=FBgn0033243.1.path1;transcripts=FBgn0033243.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42732963	42738000	.	-	.	ID=FBgn0033243.1.mrna1;geneID=FBgn0033243.1.path1;Name=FBgn0033243.1;Dir=sensecoverage=100.0;identity=100.0;matches=459;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016914
Chr2	stalkie_big_nohaplotig	exon	42732963	42733125	100	-	.	Parent=FBgn0033243.1.mrna1;Target=FBgn0033243.1 297 459 +
Chr2	stalkie_big_nohaplotig	exon	42734889	42735085	100	-	.	Parent=FBgn0033243.1.mrna1;Target=FBgn0033243.1 100 296 +
Chr2	stalkie_big_nohaplotig	exon	42735158	42735220	100	-	.	Parent=FBgn0033243.1.mrna1;Target=FBgn0033243.1 37 99 +
Chr2	stalkie_big_nohaplotig	exon	42737965	42738000	100	-	.	Parent=FBgn0033243.1.mrna1;Target=FBgn0033243.1 1 36 +
Chr2	stalkie_big_nohaplotig	CDS	42732963	42733125	.	-	1	Parent=FBgn0033243.1.mrna1;Target=FBgn0033243.1 297 459 +
Chr2	stalkie_big_nohaplotig	CDS	42734889	42735085	.	-	0	Parent=FBgn0033243.1.mrna1;Target=FBgn0033243.1 100 296 +
Chr2	stalkie_big_nohaplotig	CDS	42735158	42735220	.	-	0	Parent=FBgn0033243.1.mrna1;Target=FBgn0033243.1 37 99 +
Chr2	stalkie_big_nohaplotig	CDS	42737965	42738000	.	-	0	Parent=FBgn0033243.1.mrna1;Target=FBgn0033243.1 1 36 +
Chr2	gffcl	locus	42738849	42739334	.	-	.	ID=RLOC_00016915;geneIDs=comp152978_c0_seq1.path1;transcripts=comp152978_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42738849	42739334	.	-	.	ID=comp152978_c0_seq1.mrna1;geneID=comp152978_c0_seq1.path1;Name=comp152978_c0_seq1;Dir=indeterminatecoverage=92.2;identity=90.2;matches=397;mismatches=19;indels=24;unknowns=0;Target=comp152978_c0_seq1 265 155 .;locus=RLOC_00016915
Chr2	stalkie_big_nohaplotig	exon	42738849	42738932	90	-	.	Parent=comp152978_c0_seq1.mrna1;Target=comp152978_c0_seq1 488 405 .
Chr2	stalkie_big_nohaplotig	exon	42739003	42739334	90	-	.	Parent=comp152978_c0_seq1.mrna1;Target=comp152978_c0_seq1 394 39 .
Chr2	stalkie_big_nohaplotig	CDS	42739132	42739242	.	-	0	Parent=comp152978_c0_seq1.mrna1
Chr2	gffcl	locus	42739345	42740057	.	-	.	ID=RLOC_00016916;geneIDs=comp135303_c0_seq1.path1;transcripts=comp135303_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42739345	42740057	.	-	.	ID=comp135303_c0_seq1.mrna1;geneID=comp135303_c0_seq1.path1;Name=comp135303_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=706;mismatches=6;indels=1;unknowns=0;Target=comp135303_c0_seq1 712 1 .;CDS_Target=comp135303_c0_seq1 541 488 .;locus=RLOC_00016916
Chr2	stalkie_big_nohaplotig	exon	42739345	42740057	99	-	.	Parent=comp135303_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42739516	42739570	.	-	0	Parent=comp135303_c0_seq1.mrna1
Chr2	gffcl	locus	42749545	42750856	.	+	.	ID=RLOC_00016918;geneIDs=FBgn0027054.1.path1;transcripts=FBgn0027054.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42749545	42750856	.	+	.	ID=FBgn0027054.1.mrna1;geneID=FBgn0027054.1.path1;Name=FBgn0027054.1;Dir=sensecoverage=100.0;identity=99.5;matches=1221;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016918
Chr2	stalkie_big_nohaplotig	exon	42749545	42750111	99	+	.	Parent=FBgn0027054.1.mrna1;Target=FBgn0027054.1 1 567 +
Chr2	stalkie_big_nohaplotig	exon	42750197	42750856	99	+	.	Parent=FBgn0027054.1.mrna1;Target=FBgn0027054.1 568 1227 +
Chr2	stalkie_big_nohaplotig	CDS	42749545	42750111	.	+	0	Parent=FBgn0027054.1.mrna1;Target=FBgn0027054.1 1 567 +
Chr2	stalkie_big_nohaplotig	CDS	42750197	42750856	.	+	0	Parent=FBgn0027054.1.mrna1;Target=FBgn0027054.1 568 1227 +
Chr2	gffcl	locus	42755936	42756261	.	-	.	ID=RLOC_00016919;geneIDs=comp155705_c0_seq1.path1;transcripts=comp155705_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42755936	42756261	.	-	.	ID=comp155705_c0_seq1.mrna1;geneID=comp155705_c0_seq1.path1;Name=comp155705_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=326;mismatches=0;indels=0;unknowns=0;Target=comp155705_c0_seq1 326 1 .;CDS_Target=comp155705_c0_seq1 254 159 .;locus=RLOC_00016919
Chr2	stalkie_big_nohaplotig	exon	42755936	42756261	100	-	.	Parent=comp155705_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42756008	42756103	.	-	0	Parent=comp155705_c0_seq1.mrna1
Chr2	gffcl	locus	42756466	42796435	.	.	.	ID=RLOC_00016920;geneIDs=FBgn0033246.1.path1,comp87836_c0_seq1.path1,comp157713_c0_seq1.path1;transcripts=FBgn0033246.1.mrna1,comp157713_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42756466	42796112	.	-	.	ID=FBgn0033246.1.mrna1;geneID=FBgn0033246.1.path1;Name=FBgn0033246.1;Dir=sensecoverage=96.8;identity=99.7;matches=7073;mismatches=18;indels=0;unknowns=0;locus=RLOC_00016920
Chr2	stalkie_big_nohaplotig	exon	42756466	42756597	100	-	.	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 7195 7326 +
Chr2	stalkie_big_nohaplotig	exon	42756675	42756809	100	-	.	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 7060 7194 +
Chr2	stalkie_big_nohaplotig	exon	42756941	42757288	98	-	.	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 6712 7059 +
Chr2	stalkie_big_nohaplotig	exon	42757346	42757756	99	-	.	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 6301 6711 +
Chr2	stalkie_big_nohaplotig	exon	42757820	42758013	99	-	.	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 6107 6300 +
Chr2	stalkie_big_nohaplotig	exon	42758083	42758259	99	-	.	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 5930 6106 +
Chr2	stalkie_big_nohaplotig	exon	42758328	42758415	95	-	.	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 5842 5929 +
Chr2	stalkie_big_nohaplotig	exon	42758478	42758906	99	-	.	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 5413 5841 +
Chr2	stalkie_big_nohaplotig	exon	42758986	42759156	98	-	.	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 5242 5412 +
Chr2	stalkie_big_nohaplotig	exon	42759215	42759517	100	-	.	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 4939 5241 +
Chr2	stalkie_big_nohaplotig	exon	42759574	42759936	100	-	.	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 4576 4938 +
Chr2	stalkie_big_nohaplotig	exon	42760012	42760270	100	-	.	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 4317 4575 +
Chr2	stalkie_big_nohaplotig	exon	42760329	42760600	100	-	.	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 4045 4316 +
Chr2	stalkie_big_nohaplotig	exon	42760667	42760844	100	-	.	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 3867 4044 +
Chr2	stalkie_big_nohaplotig	exon	42760910	42763565	99	-	.	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 1211 3866 +
Chr2	stalkie_big_nohaplotig	exon	42778946	42779234	100	-	.	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 922 1210 +
Chr2	stalkie_big_nohaplotig	exon	42779323	42779689	100	-	.	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 555 921 +
Chr2	stalkie_big_nohaplotig	exon	42795714	42795838	99	-	.	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 430 554 +
Chr2	stalkie_big_nohaplotig	exon	42795919	42796112	100	-	.	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 236 429 +
Chr2	stalkie_big_nohaplotig	CDS	42756466	42756597	.	-	0	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 7195 7326 +
Chr2	stalkie_big_nohaplotig	CDS	42756675	42756809	.	-	0	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 7060 7194 +
Chr2	stalkie_big_nohaplotig	CDS	42756941	42757288	.	-	0	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 6712 7059 +
Chr2	stalkie_big_nohaplotig	CDS	42757346	42757756	.	-	0	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 6301 6711 +
Chr2	stalkie_big_nohaplotig	CDS	42757820	42758013	.	-	2	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 6107 6300 +
Chr2	stalkie_big_nohaplotig	CDS	42758083	42758259	.	-	2	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 5930 6106 +
Chr2	stalkie_big_nohaplotig	CDS	42758328	42758415	.	-	0	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 5842 5929 +
Chr2	stalkie_big_nohaplotig	CDS	42758478	42758906	.	-	0	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 5413 5841 +
Chr2	stalkie_big_nohaplotig	CDS	42758986	42759156	.	-	0	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 5242 5412 +
Chr2	stalkie_big_nohaplotig	CDS	42759215	42759517	.	-	0	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 4939 5241 +
Chr2	stalkie_big_nohaplotig	CDS	42759574	42759936	.	-	0	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 4576 4938 +
Chr2	stalkie_big_nohaplotig	CDS	42760012	42760270	.	-	1	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 4317 4575 +
Chr2	stalkie_big_nohaplotig	CDS	42760329	42760600	.	-	0	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 4045 4316 +
Chr2	stalkie_big_nohaplotig	CDS	42760667	42760844	.	-	1	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 3867 4044 +
Chr2	stalkie_big_nohaplotig	CDS	42760910	42763565	.	-	2	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 1211 3866 +
Chr2	stalkie_big_nohaplotig	CDS	42778946	42779234	.	-	0	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 922 1210 +
Chr2	stalkie_big_nohaplotig	CDS	42779323	42779689	.	-	1	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 555 921 +
Chr2	stalkie_big_nohaplotig	CDS	42795714	42795838	.	-	0	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 430 554 +
Chr2	stalkie_big_nohaplotig	CDS	42795919	42796110	.	-	0	Parent=FBgn0033246.1.mrna1;Target=FBgn0033246.1 238 429 +
Chr2	stalkie_big_nohaplotig	mRNA	42794524	42795736	.	+	.	ID=comp157713_c0_seq1.mrna1;geneID=comp157713_c0_seq1.path1;Name=comp157713_c0_seq1;Dir=indeterminatecoverage=99.9;identity=93.3;matches=1168;mismatches=43;indels=41;unknowns=0;Target=comp157713_c0_seq1 1251 2 .;CDS_Target=comp157713_c0_seq1 139 2 .;locus=RLOC_00016920
Chr2	stalkie_big_nohaplotig	exon	42794524	42795736	93	+	.	Parent=comp157713_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42794524	42794660	.	+	0	Parent=comp157713_c0_seq1.mrna1
Chr2	gffcl	locus	42812834	42814174	.	+	.	ID=RLOC_00016921;geneIDs=FBgn0033247.1.path1;transcripts=FBgn0033247.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42812834	42814174	.	+	.	ID=FBgn0033247.1.mrna1;geneID=FBgn0033247.1.path1;Name=FBgn0033247.1;Dir=sensecoverage=100.0;identity=99.4;matches=1074;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016921
Chr2	stalkie_big_nohaplotig	exon	42812834	42812953	99	+	.	Parent=FBgn0033247.1.mrna1;Target=FBgn0033247.1 1 120 +
Chr2	stalkie_big_nohaplotig	exon	42813028	42813468	99	+	.	Parent=FBgn0033247.1.mrna1;Target=FBgn0033247.1 121 561 +
Chr2	stalkie_big_nohaplotig	exon	42813534	42813742	99	+	.	Parent=FBgn0033247.1.mrna1;Target=FBgn0033247.1 562 770 +
Chr2	stalkie_big_nohaplotig	exon	42813804	42813946	100	+	.	Parent=FBgn0033247.1.mrna1;Target=FBgn0033247.1 771 913 +
Chr2	stalkie_big_nohaplotig	exon	42814008	42814174	100	+	.	Parent=FBgn0033247.1.mrna1;Target=FBgn0033247.1 914 1080 +
Chr2	stalkie_big_nohaplotig	CDS	42812834	42812953	.	+	0	Parent=FBgn0033247.1.mrna1;Target=FBgn0033247.1 1 120 +
Chr2	stalkie_big_nohaplotig	CDS	42813028	42813468	.	+	0	Parent=FBgn0033247.1.mrna1;Target=FBgn0033247.1 121 561 +
Chr2	stalkie_big_nohaplotig	CDS	42813534	42813742	.	+	0	Parent=FBgn0033247.1.mrna1;Target=FBgn0033247.1 562 770 +
Chr2	stalkie_big_nohaplotig	CDS	42813804	42813946	.	+	1	Parent=FBgn0033247.1.mrna1;Target=FBgn0033247.1 771 913 +
Chr2	stalkie_big_nohaplotig	CDS	42814008	42814174	.	+	2	Parent=FBgn0033247.1.mrna1;Target=FBgn0033247.1 914 1080 +
Chr2	gffcl	locus	42815043	42815953	.	-	.	ID=RLOC_00016922;geneIDs=comp159804_c0_seq1.path1;transcripts=comp159804_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42815043	42815953	.	-	.	ID=comp159804_c0_seq1.mrna1;geneID=comp159804_c0_seq1.path1;Name=comp159804_c0_seq1;Dir=sensecoverage=97.3;identity=92.0;matches=764;mismatches=26;indels=40;unknowns=0;Target=comp159804_c0_seq1 455 796 +;locus=RLOC_00016922
Chr2	stalkie_big_nohaplotig	exon	42815043	42815724	90	-	.	Parent=comp159804_c0_seq1.mrna1;Target=comp159804_c0_seq1 132 853 +
Chr2	stalkie_big_nohaplotig	exon	42815779	42815820	100	-	.	Parent=comp159804_c0_seq1.mrna1;Target=comp159804_c0_seq1 90 131 +
Chr2	stalkie_big_nohaplotig	exon	42815888	42815953	98	-	.	Parent=comp159804_c0_seq1.mrna1;Target=comp159804_c0_seq1 24 89 +
Chr2	stalkie_big_nohaplotig	CDS	42815100	42815441	.	-	0	Parent=comp159804_c0_seq1.mrna1
Chr2	gffcl	locus	42826300	42829895	.	-	.	ID=RLOC_00016923;geneIDs=FBgn0027788.1.path1;transcripts=FBgn0027788.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42826300	42829895	.	-	.	ID=FBgn0027788.1.mrna1;geneID=FBgn0027788.1.path1;Name=FBgn0027788.1;Dir=sensecoverage=100.0;identity=99.3;matches=1212;mismatches=9;indels=0;unknowns=0;locus=RLOC_00016923
Chr2	stalkie_big_nohaplotig	exon	42826300	42827129	99	-	.	Parent=FBgn0027788.1.mrna1;Target=FBgn0027788.1 392 1221 +
Chr2	stalkie_big_nohaplotig	exon	42829202	42829416	99	-	.	Parent=FBgn0027788.1.mrna1;Target=FBgn0027788.1 177 391 +
Chr2	stalkie_big_nohaplotig	exon	42829720	42829895	100	-	.	Parent=FBgn0027788.1.mrna1;Target=FBgn0027788.1 1 176 +
Chr2	stalkie_big_nohaplotig	CDS	42826300	42827129	.	-	2	Parent=FBgn0027788.1.mrna1;Target=FBgn0027788.1 392 1221 +
Chr2	stalkie_big_nohaplotig	CDS	42829202	42829416	.	-	1	Parent=FBgn0027788.1.mrna1;Target=FBgn0027788.1 177 391 +
Chr2	stalkie_big_nohaplotig	CDS	42829720	42829895	.	-	0	Parent=FBgn0027788.1.mrna1;Target=FBgn0027788.1 1 176 +
Chr2	gffcl	locus	42836588	42842589	.	-	.	ID=RLOC_00016924;geneIDs=comp148778_c0_seq1.path1;transcripts=comp148778_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42836588	42842589	.	-	.	ID=comp148778_c0_seq1.mrna1;geneID=comp148778_c0_seq1.path1;Name=comp148778_c0_seq1;Dir=sensecoverage=57.8;identity=98.9;matches=1185;mismatches=11;indels=2;unknowns=0;locus=RLOC_00016924
Chr2	stalkie_big_nohaplotig	exon	42836588	42837673	98	-	.	Parent=comp148778_c0_seq1.mrna1;Target=comp148778_c0_seq1 930 2015 +
Chr2	stalkie_big_nohaplotig	exon	42842480	42842589	98	-	.	Parent=comp148778_c0_seq1.mrna1;Target=comp148778_c0_seq1 818 929 +
Chr2	stalkie_big_nohaplotig	CDS	42836759	42837673	.	-	0	Parent=comp148778_c0_seq1.mrna1;Target=comp148778_c0_seq1 930 1844 +
Chr2	stalkie_big_nohaplotig	CDS	42842480	42842521	.	-	0	Parent=comp148778_c0_seq1.mrna1;Target=comp148778_c0_seq1 888 929 +
Chr2	gffcl	locus	42837961	42838776	.	-	.	ID=RLOC_00016925;geneIDs=comp137194_c1_seq1.path1;transcripts=comp137194_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42837961	42838776	.	-	.	ID=comp137194_c1_seq1.mrna1;geneID=comp137194_c1_seq1.path1;Name=comp137194_c1_seq1;Dir=indeterminatecoverage=99.9;identity=87.7;matches=742;mismatches=65;indels=39;unknowns=0;Target=comp137194_c1_seq1 837 1 .;CDS_Target=comp137194_c1_seq1 664 575 .;locus=RLOC_00016925
Chr2	stalkie_big_nohaplotig	exon	42837961	42838776	87	-	.	Parent=comp137194_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42838134	42838227	.	-	0	Parent=comp137194_c1_seq1.mrna1
Chr2	gffcl	locus	42856630	42861804	.	+	.	ID=RLOC_00016926;geneIDs=FBgn0013307.1.path1;transcripts=FBgn0013307.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42856630	42861804	.	+	.	ID=FBgn0013307.1.mrna1;geneID=FBgn0013307.1.path1;Name=FBgn0013307.1;Dir=sensecoverage=100.0;identity=98.0;matches=744;mismatches=14;indels=1;unknowns=0;Target=FBgn0013307.1 3 53 +;locus=RLOC_00016926
Chr2	stalkie_big_nohaplotig	exon	42856630	42856748	96	+	.	Parent=FBgn0013307.1.mrna1;Target=FBgn0013307.1 1 120 +
Chr2	stalkie_big_nohaplotig	exon	42858041	42858214	99	+	.	Parent=FBgn0013307.1.mrna1;Target=FBgn0013307.1 121 294 +
Chr2	stalkie_big_nohaplotig	exon	42858274	42858519	97	+	.	Parent=FBgn0013307.1.mrna1;Target=FBgn0013307.1 295 540 +
Chr2	stalkie_big_nohaplotig	exon	42858939	42859010	97	+	.	Parent=FBgn0013307.1.mrna1;Target=FBgn0013307.1 541 612 +
Chr2	stalkie_big_nohaplotig	exon	42861658	42861804	99	+	.	Parent=FBgn0013307.1.mrna1;Target=FBgn0013307.1 613 759 +
Chr2	stalkie_big_nohaplotig	CDS	42856632	42856681	.	+	0	Parent=FBgn0013307.1.mrna1
Chr2	gffcl	locus	42864930	42865139	.	-	.	ID=RLOC_00016927;geneIDs=comp137659_c0_seq1.path1;transcripts=comp137659_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42864930	42865139	.	-	.	ID=comp137659_c0_seq1.mrna1;geneID=comp137659_c0_seq1.path1;Name=comp137659_c0_seq1;Dir=indeterminatecoverage=81.4;identity=94.1;matches=206;mismatches=4;indels=9;unknowns=0;Target=comp137659_c0_seq1 244 26 .;CDS_Target=comp137659_c0_seq1 242 180 .;locus=RLOC_00016927
Chr2	stalkie_big_nohaplotig	exon	42864930	42865139	94	-	.	Parent=comp137659_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42864932	42864994	.	-	0	Parent=comp137659_c0_seq1.mrna1
Chr2	gffcl	locus	42919996	42920237	.	-	.	ID=RLOC_00016928;geneIDs=comp118118_c1_seq1.path1;transcripts=comp118118_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42919996	42920237	.	-	.	ID=comp118118_c1_seq1.mrna1;geneID=comp118118_c1_seq1.path1;Name=comp118118_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=242;mismatches=0;indels=0;unknowns=0;Target=comp118118_c1_seq1 242 1 .;CDS_Target=comp118118_c1_seq1 237 40 .;locus=RLOC_00016928
Chr2	stalkie_big_nohaplotig	exon	42919996	42920237	100	-	.	Parent=comp118118_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42920001	42920198	.	-	0	Parent=comp118118_c1_seq1.mrna1
Chr2	gffcl	locus	42920563	42954274	.	+	.	ID=RLOC_00016929;geneIDs=FBgn0025360.1.path1;transcripts=FBgn0025360.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42920563	42954274	.	+	.	ID=FBgn0025360.1.mrna1;geneID=FBgn0025360.1.path1;Name=FBgn0025360.1;Dir=sensecoverage=100.0;identity=99.9;matches=1366;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016929
Chr2	stalkie_big_nohaplotig	exon	42920563	42920882	100	+	.	Parent=FBgn0025360.1.mrna1;Target=FBgn0025360.1 1 320 +
Chr2	stalkie_big_nohaplotig	exon	42932655	42932773	99	+	.	Parent=FBgn0025360.1.mrna1;Target=FBgn0025360.1 321 439 +
Chr2	stalkie_big_nohaplotig	exon	42936058	42936307	100	+	.	Parent=FBgn0025360.1.mrna1;Target=FBgn0025360.1 440 689 +
Chr2	stalkie_big_nohaplotig	exon	42953596	42954274	99	+	.	Parent=FBgn0025360.1.mrna1;Target=FBgn0025360.1 690 1368 +
Chr2	stalkie_big_nohaplotig	CDS	42920563	42920882	.	+	0	Parent=FBgn0025360.1.mrna1;Target=FBgn0025360.1 1 320 +
Chr2	stalkie_big_nohaplotig	CDS	42932655	42932773	.	+	1	Parent=FBgn0025360.1.mrna1;Target=FBgn0025360.1 321 439 +
Chr2	stalkie_big_nohaplotig	CDS	42936058	42936307	.	+	2	Parent=FBgn0025360.1.mrna1;Target=FBgn0025360.1 440 689 +
Chr2	stalkie_big_nohaplotig	CDS	42953596	42954274	.	+	1	Parent=FBgn0025360.1.mrna1;Target=FBgn0025360.1 690 1368 +
Chr2	gffcl	locus	42985881	42986631	.	+	.	ID=RLOC_00016931;geneIDs=comp153274_c0_seq1.path1;transcripts=comp153274_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	42985881	42986631	.	+	.	ID=comp153274_c0_seq1.mrna1;geneID=comp153274_c0_seq1.path1;Name=comp153274_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=751;mismatches=0;indels=0;unknowns=0;Target=comp153274_c0_seq1 751 1 .;CDS_Target=comp153274_c0_seq1 101 3 .;locus=RLOC_00016931
Chr2	stalkie_big_nohaplotig	exon	42985881	42986631	100	+	.	Parent=comp153274_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	42985883	42985981	.	+	0	Parent=comp153274_c0_seq1.mrna1
Chr2	gffcl	locus	43017212	43022710	.	+	.	ID=RLOC_00016932;geneIDs=FBgn0000289.1.path1;transcripts=FBgn0000289.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43017212	43022710	.	+	.	ID=FBgn0000289.1.mrna1;geneID=FBgn0000289.1.path1;Name=FBgn0000289.1;Dir=sensecoverage=100.0;identity=99.8;matches=1596;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016932
Chr2	stalkie_big_nohaplotig	exon	43017212	43017385	99	+	.	Parent=FBgn0000289.1.mrna1;Target=FBgn0000289.1 1 174 +
Chr2	stalkie_big_nohaplotig	exon	43020381	43020588	99	+	.	Parent=FBgn0000289.1.mrna1;Target=FBgn0000289.1 175 382 +
Chr2	stalkie_big_nohaplotig	exon	43020650	43020874	100	+	.	Parent=FBgn0000289.1.mrna1;Target=FBgn0000289.1 383 607 +
Chr2	stalkie_big_nohaplotig	exon	43020967	43021133	99	+	.	Parent=FBgn0000289.1.mrna1;Target=FBgn0000289.1 608 774 +
Chr2	stalkie_big_nohaplotig	exon	43021212	43021314	100	+	.	Parent=FBgn0000289.1.mrna1;Target=FBgn0000289.1 775 877 +
Chr2	stalkie_big_nohaplotig	exon	43021373	43021697	100	+	.	Parent=FBgn0000289.1.mrna1;Target=FBgn0000289.1 878 1202 +
Chr2	stalkie_big_nohaplotig	exon	43021759	43021923	100	+	.	Parent=FBgn0000289.1.mrna1;Target=FBgn0000289.1 1203 1367 +
Chr2	stalkie_big_nohaplotig	exon	43022007	43022187	100	+	.	Parent=FBgn0000289.1.mrna1;Target=FBgn0000289.1 1368 1548 +
Chr2	stalkie_big_nohaplotig	exon	43022660	43022710	100	+	.	Parent=FBgn0000289.1.mrna1;Target=FBgn0000289.1 1549 1599 +
Chr2	stalkie_big_nohaplotig	CDS	43017212	43017385	.	+	0	Parent=FBgn0000289.1.mrna1;Target=FBgn0000289.1 1 174 +
Chr2	stalkie_big_nohaplotig	CDS	43020381	43020588	.	+	0	Parent=FBgn0000289.1.mrna1;Target=FBgn0000289.1 175 382 +
Chr2	stalkie_big_nohaplotig	CDS	43020650	43020874	.	+	2	Parent=FBgn0000289.1.mrna1;Target=FBgn0000289.1 383 607 +
Chr2	stalkie_big_nohaplotig	CDS	43020967	43021133	.	+	2	Parent=FBgn0000289.1.mrna1;Target=FBgn0000289.1 608 774 +
Chr2	stalkie_big_nohaplotig	CDS	43021212	43021314	.	+	0	Parent=FBgn0000289.1.mrna1;Target=FBgn0000289.1 775 877 +
Chr2	stalkie_big_nohaplotig	CDS	43021373	43021697	.	+	2	Parent=FBgn0000289.1.mrna1;Target=FBgn0000289.1 878 1202 +
Chr2	stalkie_big_nohaplotig	CDS	43021759	43021923	.	+	1	Parent=FBgn0000289.1.mrna1;Target=FBgn0000289.1 1203 1367 +
Chr2	stalkie_big_nohaplotig	CDS	43022007	43022187	.	+	1	Parent=FBgn0000289.1.mrna1;Target=FBgn0000289.1 1368 1548 +
Chr2	stalkie_big_nohaplotig	CDS	43022660	43022710	.	+	0	Parent=FBgn0000289.1.mrna1;Target=FBgn0000289.1 1549 1599 +
Chr2	gffcl	locus	43056560	43060471	.	+	.	ID=RLOC_00016933;geneIDs=FBgn0033911.1.path1;transcripts=FBgn0033911.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43056560	43060471	.	+	.	ID=FBgn0033911.1.mrna1;geneID=FBgn0033911.1.path1;Name=FBgn0033911.1;Dir=sensecoverage=100.0;identity=99.8;matches=1689;mismatches=3;indels=0;unknowns=0;locus=RLOC_00016933
Chr2	stalkie_big_nohaplotig	exon	43056560	43056803	99	+	.	Parent=FBgn0033911.1.mrna1;Target=FBgn0033911.1 1 244 +
Chr2	stalkie_big_nohaplotig	exon	43056869	43057022	98	+	.	Parent=FBgn0033911.1.mrna1;Target=FBgn0033911.1 245 398 +
Chr2	stalkie_big_nohaplotig	exon	43059178	43060471	100	+	.	Parent=FBgn0033911.1.mrna1;Target=FBgn0033911.1 399 1692 +
Chr2	stalkie_big_nohaplotig	CDS	43056560	43056803	.	+	0	Parent=FBgn0033911.1.mrna1;Target=FBgn0033911.1 1 244 +
Chr2	stalkie_big_nohaplotig	CDS	43056869	43057022	.	+	2	Parent=FBgn0033911.1.mrna1;Target=FBgn0033911.1 245 398 +
Chr2	stalkie_big_nohaplotig	CDS	43059178	43060471	.	+	1	Parent=FBgn0033911.1.mrna1;Target=FBgn0033911.1 399 1692 +
Chr2	gffcl	locus	43063274	43065940	.	-	.	ID=RLOC_00016934;geneIDs=FBgn0050069.path2;transcripts=FBgn0050069.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	43063274	43065940	.	-	.	ID=FBgn0050069.mrna2;geneID=FBgn0050069.path2;Name=FBgn0050069;Dir=indeterminatecoverage=100.0;identity=98.8;matches=2636;mismatches=31;indels=0;unknowns=0;Target=FBgn0050069 2667 1 .;locus=RLOC_00016934
Chr2	stalkie_big_nohaplotig	exon	43063274	43065940	98	-	.	Parent=FBgn0050069.mrna2
Chr2	stalkie_big_nohaplotig	CDS	43063274	43065940	.	-	0	Parent=FBgn0050069.mrna2
Chr2	gffcl	locus	43077107	43079773	.	+	.	ID=RLOC_00016935;geneIDs=FBgn0050069.path3;transcripts=FBgn0050069.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	43077107	43079773	.	+	.	ID=FBgn0050069.mrna3;geneID=FBgn0050069.path3;Name=FBgn0050069;Dir=indeterminatecoverage=100.0;identity=98.8;matches=2635;mismatches=32;indels=0;unknowns=0;Target=FBgn0050069 2667 1 .;locus=RLOC_00016935
Chr2	stalkie_big_nohaplotig	exon	43077107	43079773	98	+	.	Parent=FBgn0050069.mrna3
Chr2	stalkie_big_nohaplotig	CDS	43077107	43079773	.	+	0	Parent=FBgn0050069.mrna3
Chr2	gffcl	locus	43082576	43086538	.	-	.	ID=RLOC_00016936;geneIDs=FBgn0033911.1.path2;transcripts=FBgn0033911.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	43082576	43086538	.	-	.	ID=FBgn0033911.1.mrna2;geneID=FBgn0033911.1.path2;Name=FBgn0033911.1;Dir=sensecoverage=100.0;identity=99.8;matches=1688;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016936
Chr2	stalkie_big_nohaplotig	exon	43082576	43083869	100	-	.	Parent=FBgn0033911.1.mrna2;Target=FBgn0033911.1 399 1692 +
Chr2	stalkie_big_nohaplotig	exon	43086072	43086225	98	-	.	Parent=FBgn0033911.1.mrna2;Target=FBgn0033911.1 245 398 +
Chr2	stalkie_big_nohaplotig	exon	43086295	43086538	99	-	.	Parent=FBgn0033911.1.mrna2;Target=FBgn0033911.1 1 244 +
Chr2	stalkie_big_nohaplotig	CDS	43082576	43083869	.	-	1	Parent=FBgn0033911.1.mrna2;Target=FBgn0033911.1 399 1692 +
Chr2	stalkie_big_nohaplotig	CDS	43086072	43086225	.	-	2	Parent=FBgn0033911.1.mrna2;Target=FBgn0033911.1 245 398 +
Chr2	stalkie_big_nohaplotig	CDS	43086295	43086538	.	-	0	Parent=FBgn0033911.1.mrna2;Target=FBgn0033911.1 1 244 +
Chr2	gffcl	locus	43090404	43121100	.	-	.	ID=RLOC_00016937;geneIDs=FBgn0005613.1.path1;transcripts=FBgn0005613.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43090404	43121100	.	-	.	ID=FBgn0005613.1.mrna1;geneID=FBgn0005613.1.path1;Name=FBgn0005613.1;Dir=sensecoverage=100.0;identity=99.5;matches=2274;mismatches=12;indels=0;unknowns=0;locus=RLOC_00016937
Chr2	stalkie_big_nohaplotig	exon	43090404	43091944	99	-	.	Parent=FBgn0005613.1.mrna1;Target=FBgn0005613.1 746 2286 +
Chr2	stalkie_big_nohaplotig	exon	43092010	43092647	99	-	.	Parent=FBgn0005613.1.mrna1;Target=FBgn0005613.1 108 745 +
Chr2	stalkie_big_nohaplotig	exon	43120994	43121100	100	-	.	Parent=FBgn0005613.1.mrna1;Target=FBgn0005613.1 1 107 +
Chr2	stalkie_big_nohaplotig	CDS	43090404	43091944	.	-	2	Parent=FBgn0005613.1.mrna1;Target=FBgn0005613.1 746 2286 +
Chr2	stalkie_big_nohaplotig	CDS	43092010	43092647	.	-	1	Parent=FBgn0005613.1.mrna1;Target=FBgn0005613.1 108 745 +
Chr2	stalkie_big_nohaplotig	CDS	43120994	43121100	.	-	0	Parent=FBgn0005613.1.mrna1;Target=FBgn0005613.1 1 107 +
Chr2	gffcl	locus	43126848	43127407	.	+	.	ID=RLOC_00016938;geneIDs=comp146395_c1_seq1.path1;transcripts=comp146395_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43126848	43127407	.	+	.	ID=comp146395_c1_seq1.mrna1;geneID=comp146395_c1_seq1.path1;Name=comp146395_c1_seq1;Dir=indeterminatecoverage=100.0;identity=94.8;matches=531;mismatches=27;indels=2;unknowns=0;Target=comp146395_c1_seq1 558 1 .;CDS_Target=comp146395_c1_seq1 558 364 .;locus=RLOC_00016938
Chr2	stalkie_big_nohaplotig	exon	43126848	43127407	94	+	.	Parent=comp146395_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43127213	43127407	.	+	0	Parent=comp146395_c1_seq1.mrna1
Chr2	gffcl	locus	43134719	43135278	.	+	.	ID=RLOC_00016939;geneIDs=comp146395_c1_seq1.path2;transcripts=comp146395_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	43134719	43135278	.	+	.	ID=comp146395_c1_seq1.mrna2;geneID=comp146395_c1_seq1.path2;Name=comp146395_c1_seq1;Dir=indeterminatecoverage=100.0;identity=94.8;matches=531;mismatches=27;indels=2;unknowns=0;Target=comp146395_c1_seq1 558 1 .;CDS_Target=comp146395_c1_seq1 558 364 .;locus=RLOC_00016939
Chr2	stalkie_big_nohaplotig	exon	43134719	43135278	94	+	.	Parent=comp146395_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	43135084	43135278	.	+	0	Parent=comp146395_c1_seq1.mrna2
Chr2	gffcl	locus	43142390	43143181	.	-	.	ID=RLOC_00016940;geneIDs=FBgn0033032.1.path1;transcripts=FBgn0033032.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43142390	43143181	.	-	.	ID=FBgn0033032.1.mrna1;geneID=FBgn0033032.1.path1;Name=FBgn0033032.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=788;mismatches=4;indels=0;unknowns=0;Target=FBgn0033032.1 792 1 .;locus=RLOC_00016940
Chr2	stalkie_big_nohaplotig	exon	43142390	43143181	99	-	.	Parent=FBgn0033032.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43142390	43143181	.	-	0	Parent=FBgn0033032.1.mrna1
Chr2	gffcl	locus	43145354	43148711	.	+	.	ID=RLOC_00016941;geneIDs=FBgn0033015.1.path1;transcripts=FBgn0033015.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43145354	43148711	.	+	.	ID=FBgn0033015.1.mrna1;geneID=FBgn0033015.1.path1;Name=FBgn0033015.1;Dir=sensecoverage=99.9;identity=99.6;matches=1444;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016941
Chr2	stalkie_big_nohaplotig	exon	43145354	43145793	99	+	.	Parent=FBgn0033015.1.mrna1;Target=FBgn0033015.1 3 442 +
Chr2	stalkie_big_nohaplotig	exon	43147641	43147901	99	+	.	Parent=FBgn0033015.1.mrna1;Target=FBgn0033015.1 443 703 +
Chr2	stalkie_big_nohaplotig	exon	43147963	43148711	99	+	.	Parent=FBgn0033015.1.mrna1;Target=FBgn0033015.1 704 1452 +
Chr2	stalkie_big_nohaplotig	CDS	43145355	43145793	.	+	0	Parent=FBgn0033015.1.mrna1;Target=FBgn0033015.1 4 442 +
Chr2	stalkie_big_nohaplotig	CDS	43147641	43147901	.	+	2	Parent=FBgn0033015.1.mrna1;Target=FBgn0033015.1 443 703 +
Chr2	stalkie_big_nohaplotig	CDS	43147963	43148711	.	+	2	Parent=FBgn0033015.1.mrna1;Target=FBgn0033015.1 704 1452 +
Chr2	gffcl	locus	43150984	43152274	.	+	.	ID=RLOC_00016942;geneIDs=comp144066_c0_seq1.path1;transcripts=comp144066_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43150984	43152274	.	+	.	ID=comp144066_c0_seq1.mrna1;geneID=comp144066_c0_seq1.path1;Name=comp144066_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1290;mismatches=1;indels=0;unknowns=0;Target=comp144066_c0_seq1 1291 1 .;CDS_Target=comp144066_c0_seq1 341 3 .;locus=RLOC_00016942
Chr2	stalkie_big_nohaplotig	exon	43150984	43152274	99	+	.	Parent=comp144066_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43150986	43151324	.	+	0	Parent=comp144066_c0_seq1.mrna1
Chr2	gffcl	locus	43177473	43177716	.	-	.	ID=RLOC_00016943;geneIDs=comp542221_c0_seq1.path1;transcripts=comp542221_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43177473	43177716	.	-	.	ID=comp542221_c0_seq1.mrna1;geneID=comp542221_c0_seq1.path1;Name=comp542221_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=239;mismatches=5;indels=0;unknowns=0;Target=comp542221_c0_seq1 244 1 .;CDS_Target=comp542221_c0_seq1 75 1 .;locus=RLOC_00016943
Chr2	stalkie_big_nohaplotig	exon	43177473	43177716	97	-	.	Parent=comp542221_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43177642	43177716	.	-	0	Parent=comp542221_c0_seq1.mrna1
Chr2	gffcl	locus	43177778	43178237	.	-	.	ID=RLOC_00016944;geneIDs=FBgn0034407.1.path1;transcripts=FBgn0034407.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43177778	43178237	.	-	.	ID=FBgn0034407.1.mrna1;geneID=FBgn0034407.1.path1;Name=FBgn0034407.1;Dir=sensecoverage=100.0;identity=98.5;matches=390;mismatches=6;indels=0;unknowns=0;locus=RLOC_00016944
Chr2	stalkie_big_nohaplotig	exon	43177778	43178020	98	-	.	Parent=FBgn0034407.1.mrna1;Target=FBgn0034407.1 154 396 +
Chr2	stalkie_big_nohaplotig	exon	43178085	43178237	98	-	.	Parent=FBgn0034407.1.mrna1;Target=FBgn0034407.1 1 153 +
Chr2	stalkie_big_nohaplotig	CDS	43177778	43178020	.	-	0	Parent=FBgn0034407.1.mrna1;Target=FBgn0034407.1 154 396 +
Chr2	stalkie_big_nohaplotig	CDS	43178085	43178237	.	-	0	Parent=FBgn0034407.1.mrna1;Target=FBgn0034407.1 1 153 +
Chr2	gffcl	locus	43193847	43206311	.	+	.	ID=RLOC_00016946;geneIDs=FBgn0034405.1.path1;transcripts=FBgn0034405.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43193847	43206311	.	+	.	ID=FBgn0034405.1.mrna1;geneID=FBgn0034405.1.path1;Name=FBgn0034405.1;Dir=sensecoverage=100.0;identity=99.5;matches=1427;mismatches=7;indels=0;unknowns=0;locus=RLOC_00016946
Chr2	stalkie_big_nohaplotig	exon	43193847	43194092	98	+	.	Parent=FBgn0034405.1.mrna1;Target=FBgn0034405.1 1 246 +
Chr2	stalkie_big_nohaplotig	exon	43201496	43201695	100	+	.	Parent=FBgn0034405.1.mrna1;Target=FBgn0034405.1 247 446 +
Chr2	stalkie_big_nohaplotig	exon	43205268	43205466	98	+	.	Parent=FBgn0034405.1.mrna1;Target=FBgn0034405.1 447 645 +
Chr2	stalkie_big_nohaplotig	exon	43205523	43206311	99	+	.	Parent=FBgn0034405.1.mrna1;Target=FBgn0034405.1 646 1434 +
Chr2	stalkie_big_nohaplotig	CDS	43193847	43194092	.	+	0	Parent=FBgn0034405.1.mrna1;Target=FBgn0034405.1 1 246 +
Chr2	stalkie_big_nohaplotig	CDS	43201496	43201695	.	+	0	Parent=FBgn0034405.1.mrna1;Target=FBgn0034405.1 247 446 +
Chr2	stalkie_big_nohaplotig	CDS	43205268	43205466	.	+	1	Parent=FBgn0034405.1.mrna1;Target=FBgn0034405.1 447 645 +
Chr2	stalkie_big_nohaplotig	CDS	43205523	43206311	.	+	0	Parent=FBgn0034405.1.mrna1;Target=FBgn0034405.1 646 1434 +
Chr2	gffcl	locus	43210840	43212557	.	+	.	ID=RLOC_00016947;geneIDs=FBgn0010053.1.path1;transcripts=FBgn0010053.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43210840	43212557	.	+	.	ID=FBgn0010053.1.mrna1;geneID=FBgn0010053.1.path1;Name=FBgn0010053.1;Dir=sensecoverage=100.0;identity=98.8;matches=1455;mismatches=18;indels=0;unknowns=0;locus=RLOC_00016947
Chr2	stalkie_big_nohaplotig	exon	43210840	43211103	97	+	.	Parent=FBgn0010053.1.mrna1;Target=FBgn0010053.1 1 264 +
Chr2	stalkie_big_nohaplotig	exon	43211187	43211386	98	+	.	Parent=FBgn0010053.1.mrna1;Target=FBgn0010053.1 265 464 +
Chr2	stalkie_big_nohaplotig	exon	43211453	43211657	98	+	.	Parent=FBgn0010053.1.mrna1;Target=FBgn0010053.1 465 669 +
Chr2	stalkie_big_nohaplotig	exon	43211754	43212557	99	+	.	Parent=FBgn0010053.1.mrna1;Target=FBgn0010053.1 670 1473 +
Chr2	stalkie_big_nohaplotig	CDS	43210840	43211103	.	+	0	Parent=FBgn0010053.1.mrna1;Target=FBgn0010053.1 1 264 +
Chr2	stalkie_big_nohaplotig	CDS	43211187	43211386	.	+	0	Parent=FBgn0010053.1.mrna1;Target=FBgn0010053.1 265 464 +
Chr2	stalkie_big_nohaplotig	CDS	43211453	43211657	.	+	1	Parent=FBgn0010053.1.mrna1;Target=FBgn0010053.1 465 669 +
Chr2	stalkie_big_nohaplotig	CDS	43211754	43212557	.	+	0	Parent=FBgn0010053.1.mrna1;Target=FBgn0010053.1 670 1473 +
Chr2	gffcl	locus	43215617	43216801	.	-	.	ID=RLOC_00016948;geneIDs=FBgn0034402.1.path1;transcripts=FBgn0034402.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43215617	43216801	.	-	.	ID=FBgn0034402.1.mrna1;geneID=FBgn0034402.1.path1;Name=FBgn0034402.1;Dir=sensecoverage=100.0;identity=98.7;matches=1105;mismatches=14;indels=0;unknowns=0;locus=RLOC_00016948
Chr2	stalkie_big_nohaplotig	exon	43215617	43216156	99	-	.	Parent=FBgn0034402.1.mrna1;Target=FBgn0034402.1 580 1119 +
Chr2	stalkie_big_nohaplotig	exon	43216223	43216801	98	-	.	Parent=FBgn0034402.1.mrna1;Target=FBgn0034402.1 1 579 +
Chr2	stalkie_big_nohaplotig	CDS	43215617	43216156	.	-	0	Parent=FBgn0034402.1.mrna1;Target=FBgn0034402.1 580 1119 +
Chr2	stalkie_big_nohaplotig	CDS	43216223	43216801	.	-	0	Parent=FBgn0034402.1.mrna1;Target=FBgn0034402.1 1 579 +
Chr2	gffcl	locus	43217913	43222281	.	+	.	ID=RLOC_00016949;geneIDs=FBgn0034401.1.path1;transcripts=FBgn0034401.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43217913	43222281	.	+	.	ID=FBgn0034401.1.mrna1;geneID=FBgn0034401.1.path1;Name=FBgn0034401.1;Dir=sensecoverage=100.0;identity=98.9;matches=2992;mismatches=32;indels=0;unknowns=0;locus=RLOC_00016949
Chr2	stalkie_big_nohaplotig	exon	43217913	43218021	97	+	.	Parent=FBgn0034401.1.mrna1;Target=FBgn0034401.1 1 109 +
Chr2	stalkie_big_nohaplotig	exon	43218101	43218222	100	+	.	Parent=FBgn0034401.1.mrna1;Target=FBgn0034401.1 110 231 +
Chr2	stalkie_big_nohaplotig	exon	43218399	43219027	99	+	.	Parent=FBgn0034401.1.mrna1;Target=FBgn0034401.1 232 860 +
Chr2	stalkie_big_nohaplotig	exon	43219093	43219296	100	+	.	Parent=FBgn0034401.1.mrna1;Target=FBgn0034401.1 861 1064 +
Chr2	stalkie_big_nohaplotig	exon	43219773	43219877	100	+	.	Parent=FBgn0034401.1.mrna1;Target=FBgn0034401.1 1065 1169 +
Chr2	stalkie_big_nohaplotig	exon	43220104	43220737	98	+	.	Parent=FBgn0034401.1.mrna1;Target=FBgn0034401.1 1170 1803 +
Chr2	stalkie_big_nohaplotig	exon	43220794	43221311	98	+	.	Parent=FBgn0034401.1.mrna1;Target=FBgn0034401.1 1804 2321 +
Chr2	stalkie_big_nohaplotig	exon	43221380	43221935	98	+	.	Parent=FBgn0034401.1.mrna1;Target=FBgn0034401.1 2322 2877 +
Chr2	stalkie_big_nohaplotig	exon	43222135	43222281	99	+	.	Parent=FBgn0034401.1.mrna1;Target=FBgn0034401.1 2878 3024 +
Chr2	stalkie_big_nohaplotig	CDS	43217913	43218021	.	+	0	Parent=FBgn0034401.1.mrna1;Target=FBgn0034401.1 1 109 +
Chr2	stalkie_big_nohaplotig	CDS	43218101	43218222	.	+	2	Parent=FBgn0034401.1.mrna1;Target=FBgn0034401.1 110 231 +
Chr2	stalkie_big_nohaplotig	CDS	43218399	43219027	.	+	0	Parent=FBgn0034401.1.mrna1;Target=FBgn0034401.1 232 860 +
Chr2	stalkie_big_nohaplotig	CDS	43219093	43219296	.	+	1	Parent=FBgn0034401.1.mrna1;Target=FBgn0034401.1 861 1064 +
Chr2	stalkie_big_nohaplotig	CDS	43219773	43219877	.	+	1	Parent=FBgn0034401.1.mrna1;Target=FBgn0034401.1 1065 1169 +
Chr2	stalkie_big_nohaplotig	CDS	43220104	43220737	.	+	1	Parent=FBgn0034401.1.mrna1;Target=FBgn0034401.1 1170 1803 +
Chr2	stalkie_big_nohaplotig	CDS	43220794	43221311	.	+	0	Parent=FBgn0034401.1.mrna1;Target=FBgn0034401.1 1804 2321 +
Chr2	stalkie_big_nohaplotig	CDS	43221380	43221935	.	+	1	Parent=FBgn0034401.1.mrna1;Target=FBgn0034401.1 2322 2877 +
Chr2	stalkie_big_nohaplotig	CDS	43222135	43222281	.	+	0	Parent=FBgn0034401.1.mrna1;Target=FBgn0034401.1 2878 3024 +
Chr2	gffcl	locus	43225320	43228700	.	-	.	ID=RLOC_00016950;geneIDs=FBgn0003174.1.path1;transcripts=FBgn0003174.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43225320	43228700	.	-	.	ID=FBgn0003174.1.mrna1;geneID=FBgn0003174.1.path1;Name=FBgn0003174.1;Dir=sensecoverage=100.0;identity=99.2;matches=2860;mismatches=23;indels=0;unknowns=0;locus=RLOC_00016950
Chr2	stalkie_big_nohaplotig	exon	43225320	43225520	100	-	.	Parent=FBgn0003174.1.mrna1;Target=FBgn0003174.1 2683 2883 +
Chr2	stalkie_big_nohaplotig	exon	43225578	43225716	100	-	.	Parent=FBgn0003174.1.mrna1;Target=FBgn0003174.1 2544 2682 +
Chr2	stalkie_big_nohaplotig	exon	43225775	43225932	100	-	.	Parent=FBgn0003174.1.mrna1;Target=FBgn0003174.1 2386 2543 +
Chr2	stalkie_big_nohaplotig	exon	43226082	43226750	99	-	.	Parent=FBgn0003174.1.mrna1;Target=FBgn0003174.1 1717 2385 +
Chr2	stalkie_big_nohaplotig	exon	43226807	43226929	100	-	.	Parent=FBgn0003174.1.mrna1;Target=FBgn0003174.1 1594 1716 +
Chr2	stalkie_big_nohaplotig	exon	43226987	43227150	96	-	.	Parent=FBgn0003174.1.mrna1;Target=FBgn0003174.1 1430 1593 +
Chr2	stalkie_big_nohaplotig	exon	43227272	43228700	99	-	.	Parent=FBgn0003174.1.mrna1;Target=FBgn0003174.1 1 1429 +
Chr2	stalkie_big_nohaplotig	CDS	43225320	43225520	.	-	0	Parent=FBgn0003174.1.mrna1;Target=FBgn0003174.1 2683 2883 +
Chr2	stalkie_big_nohaplotig	CDS	43225578	43225716	.	-	1	Parent=FBgn0003174.1.mrna1;Target=FBgn0003174.1 2544 2682 +
Chr2	stalkie_big_nohaplotig	CDS	43225775	43225932	.	-	0	Parent=FBgn0003174.1.mrna1;Target=FBgn0003174.1 2386 2543 +
Chr2	stalkie_big_nohaplotig	CDS	43226082	43226750	.	-	0	Parent=FBgn0003174.1.mrna1;Target=FBgn0003174.1 1717 2385 +
Chr2	stalkie_big_nohaplotig	CDS	43226807	43226929	.	-	0	Parent=FBgn0003174.1.mrna1;Target=FBgn0003174.1 1594 1716 +
Chr2	stalkie_big_nohaplotig	CDS	43226987	43227150	.	-	2	Parent=FBgn0003174.1.mrna1;Target=FBgn0003174.1 1430 1593 +
Chr2	stalkie_big_nohaplotig	CDS	43227272	43228700	.	-	0	Parent=FBgn0003174.1.mrna1;Target=FBgn0003174.1 1 1429 +
Chr2	gffcl	locus	43235049	43262172	.	+	.	ID=RLOC_00016951;geneIDs=AAEL006882.1.path2;transcripts=AAEL006882.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	43235049	43262172	.	+	.	ID=AAEL006882.1.mrna2;geneID=AAEL006882.1.path2;Name=AAEL006882.1;Dir=sensecoverage=83.2;identity=100.0;matches=696;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016951
Chr2	stalkie_big_nohaplotig	exon	43235049	43235054	100	+	.	Parent=AAEL006882.1.mrna2;Target=AAEL006882.1 144 149 +
Chr2	stalkie_big_nohaplotig	exon	43247859	43247863	100	+	.	Parent=AAEL006882.1.mrna2;Target=AAEL006882.1 161 165 +
Chr2	stalkie_big_nohaplotig	exon	43258646	43258647	100	+	.	Parent=AAEL006882.1.mrna2;Target=AAEL006882.1 166 167 +
Chr2	stalkie_big_nohaplotig	exon	43261245	43261445	100	+	.	Parent=AAEL006882.1.mrna2;Target=AAEL006882.1 168 368 +
Chr2	stalkie_big_nohaplotig	exon	43261508	43261638	100	+	.	Parent=AAEL006882.1.mrna2;Target=AAEL006882.1 369 499 +
Chr2	stalkie_big_nohaplotig	exon	43261823	43262172	100	+	.	Parent=AAEL006882.1.mrna2;Target=AAEL006882.1 500 849 +
Chr2	stalkie_big_nohaplotig	CDS	43235049	43235054	.	+	2	Parent=AAEL006882.1.mrna2;Target=AAEL006882.1 144 149 +
Chr2	stalkie_big_nohaplotig	CDS	43247859	43247863	.	+	2	Parent=AAEL006882.1.mrna2;Target=AAEL006882.1 161 165 +
Chr2	stalkie_big_nohaplotig	CDS	43258646	43258647	.	+	0	Parent=AAEL006882.1.mrna2;Target=AAEL006882.1 166 167 +
Chr2	stalkie_big_nohaplotig	CDS	43261245	43261445	.	+	1	Parent=AAEL006882.1.mrna2;Target=AAEL006882.1 168 368 +
Chr2	stalkie_big_nohaplotig	CDS	43261508	43261638	.	+	1	Parent=AAEL006882.1.mrna2;Target=AAEL006882.1 369 499 +
Chr2	stalkie_big_nohaplotig	CDS	43261823	43262172	.	+	2	Parent=AAEL006882.1.mrna2;Target=AAEL006882.1 500 849 +
Chr2	gffcl	locus	43267444	43271381	.	-	.	ID=RLOC_00016952;geneIDs=FBgn0033155.1.path1;transcripts=FBgn0033155.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43267444	43271381	.	-	.	ID=FBgn0033155.1.mrna1;geneID=FBgn0033155.1.path1;Name=FBgn0033155.1;Dir=sensecoverage=100.0;identity=99.6;matches=3214;mismatches=14;indels=0;unknowns=0;locus=RLOC_00016952
Chr2	stalkie_big_nohaplotig	exon	43267444	43268038	99	-	.	Parent=FBgn0033155.1.mrna1;Target=FBgn0033155.1 2634 3228 +
Chr2	stalkie_big_nohaplotig	exon	43268548	43268810	99	-	.	Parent=FBgn0033155.1.mrna1;Target=FBgn0033155.1 2371 2633 +
Chr2	stalkie_big_nohaplotig	exon	43268893	43269614	99	-	.	Parent=FBgn0033155.1.mrna1;Target=FBgn0033155.1 1649 2370 +
Chr2	stalkie_big_nohaplotig	exon	43269678	43270205	99	-	.	Parent=FBgn0033155.1.mrna1;Target=FBgn0033155.1 1121 1648 +
Chr2	stalkie_big_nohaplotig	exon	43270262	43271381	99	-	.	Parent=FBgn0033155.1.mrna1;Target=FBgn0033155.1 1 1120 +
Chr2	stalkie_big_nohaplotig	CDS	43267444	43268038	.	-	1	Parent=FBgn0033155.1.mrna1;Target=FBgn0033155.1 2634 3228 +
Chr2	stalkie_big_nohaplotig	CDS	43268548	43268810	.	-	0	Parent=FBgn0033155.1.mrna1;Target=FBgn0033155.1 2371 2633 +
Chr2	stalkie_big_nohaplotig	CDS	43268893	43269614	.	-	2	Parent=FBgn0033155.1.mrna1;Target=FBgn0033155.1 1649 2370 +
Chr2	stalkie_big_nohaplotig	CDS	43269678	43270205	.	-	2	Parent=FBgn0033155.1.mrna1;Target=FBgn0033155.1 1121 1648 +
Chr2	stalkie_big_nohaplotig	CDS	43270262	43271381	.	-	0	Parent=FBgn0033155.1.mrna1;Target=FBgn0033155.1 1 1120 +
Chr2	gffcl	locus	43273554	43277030	.	+	.	ID=RLOC_00016953;geneIDs=FBgn0260991.1.path1;transcripts=FBgn0260991.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43273554	43277030	.	+	.	ID=FBgn0260991.1.mrna1;geneID=FBgn0260991.1.path1;Name=FBgn0260991.1;Dir=sensecoverage=100.0;identity=99.5;matches=2735;mismatches=13;indels=0;unknowns=0;locus=RLOC_00016953
Chr2	stalkie_big_nohaplotig	exon	43273554	43273658	100	+	.	Parent=FBgn0260991.1.mrna1;Target=FBgn0260991.1 1 105 +
Chr2	stalkie_big_nohaplotig	exon	43273820	43273973	99	+	.	Parent=FBgn0260991.1.mrna1;Target=FBgn0260991.1 106 259 +
Chr2	stalkie_big_nohaplotig	exon	43274028	43274540	97	+	.	Parent=FBgn0260991.1.mrna1;Target=FBgn0260991.1 260 772 +
Chr2	stalkie_big_nohaplotig	exon	43274680	43274834	100	+	.	Parent=FBgn0260991.1.mrna1;Target=FBgn0260991.1 773 927 +
Chr2	stalkie_big_nohaplotig	exon	43274892	43275700	100	+	.	Parent=FBgn0260991.1.mrna1;Target=FBgn0260991.1 928 1736 +
Chr2	stalkie_big_nohaplotig	exon	43275754	43275877	100	+	.	Parent=FBgn0260991.1.mrna1;Target=FBgn0260991.1 1737 1860 +
Chr2	stalkie_big_nohaplotig	exon	43275932	43276628	100	+	.	Parent=FBgn0260991.1.mrna1;Target=FBgn0260991.1 1861 2557 +
Chr2	stalkie_big_nohaplotig	exon	43276840	43277030	99	+	.	Parent=FBgn0260991.1.mrna1;Target=FBgn0260991.1 2558 2748 +
Chr2	stalkie_big_nohaplotig	CDS	43273554	43273658	.	+	0	Parent=FBgn0260991.1.mrna1;Target=FBgn0260991.1 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	43273820	43273973	.	+	0	Parent=FBgn0260991.1.mrna1;Target=FBgn0260991.1 106 259 +
Chr2	stalkie_big_nohaplotig	CDS	43274028	43274540	.	+	2	Parent=FBgn0260991.1.mrna1;Target=FBgn0260991.1 260 772 +
Chr2	stalkie_big_nohaplotig	CDS	43274680	43274834	.	+	2	Parent=FBgn0260991.1.mrna1;Target=FBgn0260991.1 773 927 +
Chr2	stalkie_big_nohaplotig	CDS	43274892	43275700	.	+	0	Parent=FBgn0260991.1.mrna1;Target=FBgn0260991.1 928 1736 +
Chr2	stalkie_big_nohaplotig	CDS	43275754	43275877	.	+	1	Parent=FBgn0260991.1.mrna1;Target=FBgn0260991.1 1737 1860 +
Chr2	stalkie_big_nohaplotig	CDS	43275932	43276628	.	+	0	Parent=FBgn0260991.1.mrna1;Target=FBgn0260991.1 1861 2557 +
Chr2	stalkie_big_nohaplotig	CDS	43276840	43277030	.	+	2	Parent=FBgn0260991.1.mrna1;Target=FBgn0260991.1 2558 2748 +
Chr2	gffcl	locus	43312495	43313158	.	-	.	ID=RLOC_00016954;geneIDs=comp153667_c1_seq1.path2;transcripts=comp153667_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	43312495	43313158	.	-	.	ID=comp153667_c1_seq1.mrna2;geneID=comp153667_c1_seq1.path2;Name=comp153667_c1_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=519;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016954
Chr2	stalkie_big_nohaplotig	exon	43312495	43312868	99	-	.	Parent=comp153667_c1_seq1.mrna2;Target=comp153667_c1_seq1 1 374 -
Chr2	stalkie_big_nohaplotig	exon	43313012	43313158	100	-	.	Parent=comp153667_c1_seq1.mrna2;Target=comp153667_c1_seq1 375 521 -
Chr2	stalkie_big_nohaplotig	CDS	43312678	43312868	.	-	2	Parent=comp153667_c1_seq1.mrna2;Target=comp153667_c1_seq1 184 374 .
Chr2	stalkie_big_nohaplotig	CDS	43313012	43313156	.	-	0	Parent=comp153667_c1_seq1.mrna2;Target=comp153667_c1_seq1 375 519 .
Chr2	gffcl	locus	43326460	43327037	.	-	.	ID=RLOC_00016955;geneIDs=comp156929_c0_seq1.path1;transcripts=comp156929_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43326460	43327037	.	-	.	ID=comp156929_c0_seq1.mrna1;geneID=comp156929_c0_seq1.path1;Name=comp156929_c0_seq1;Dir=indeterminatecoverage=97.3;identity=98.8;matches=572;mismatches=6;indels=1;unknowns=0;Target=comp156929_c0_seq1 595 17 .;CDS_Target=comp156929_c0_seq1 51 19 .;locus=RLOC_00016955
Chr2	stalkie_big_nohaplotig	exon	43326460	43327037	98	-	.	Parent=comp156929_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43327004	43327035	.	-	0	Parent=comp156929_c0_seq1.mrna1
Chr2	gffcl	locus	43356014	43358280	.	-	.	ID=RLOC_00016956;geneIDs=comp163561_c0_seq1.path1;transcripts=comp163561_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43356014	43358280	.	-	.	ID=comp163561_c0_seq1.mrna1;geneID=comp163561_c0_seq1.path1;Name=comp163561_c0_seq1;Dir=indeterminatecoverage=99.1;identity=93.8;matches=2182;mismatches=57;indels=88;unknowns=0;Target=comp163561_c0_seq1 2320 22 .;CDS_Target=comp163561_c0_seq1 185 24 .;locus=RLOC_00016956
Chr2	stalkie_big_nohaplotig	exon	43356014	43358280	93	-	.	Parent=comp163561_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43358117	43358278	.	-	0	Parent=comp163561_c0_seq1.mrna1
Chr2	gffcl	locus	43359433	43364555	.	+	.	ID=RLOC_00016957;geneIDs=FBgn0041205.1.path1;transcripts=FBgn0041205.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43359433	43364555	.	+	.	ID=FBgn0041205.1.mrna1;geneID=FBgn0041205.1.path1;Name=FBgn0041205.1;Dir=sensecoverage=99.9;identity=99.2;matches=1015;mismatches=8;indels=0;unknowns=0;locus=RLOC_00016957
Chr2	stalkie_big_nohaplotig	exon	43359433	43359846	99	+	.	Parent=FBgn0041205.1.mrna1;Target=FBgn0041205.1 1 414 +
Chr2	stalkie_big_nohaplotig	exon	43359921	43360023	100	+	.	Parent=FBgn0041205.1.mrna1;Target=FBgn0041205.1 415 517 +
Chr2	stalkie_big_nohaplotig	exon	43363033	43363163	99	+	.	Parent=FBgn0041205.1.mrna1;Target=FBgn0041205.1 518 648 +
Chr2	stalkie_big_nohaplotig	exon	43363261	43363430	97	+	.	Parent=FBgn0041205.1.mrna1;Target=FBgn0041205.1 649 818 +
Chr2	stalkie_big_nohaplotig	exon	43363452	43363459	100	+	.	Parent=FBgn0041205.1.mrna1;Target=FBgn0041205.1 938 945 +
Chr2	stalkie_big_nohaplotig	exon	43364189	43364262	100	+	.	Parent=FBgn0041205.1.mrna1;Target=FBgn0041205.1 1355 1428 +
Chr2	stalkie_big_nohaplotig	exon	43364434	43364555	100	+	.	Parent=FBgn0041205.1.mrna1;Target=FBgn0041205.1 1429 1550 +
Chr2	stalkie_big_nohaplotig	CDS	43359433	43359846	.	+	0	Parent=FBgn0041205.1.mrna1;Target=FBgn0041205.1 1 414 +
Chr2	stalkie_big_nohaplotig	CDS	43359921	43360023	.	+	0	Parent=FBgn0041205.1.mrna1;Target=FBgn0041205.1 415 517 +
Chr2	stalkie_big_nohaplotig	CDS	43363033	43363163	.	+	2	Parent=FBgn0041205.1.mrna1;Target=FBgn0041205.1 518 648 +
Chr2	stalkie_big_nohaplotig	CDS	43363261	43363430	.	+	0	Parent=FBgn0041205.1.mrna1;Target=FBgn0041205.1 649 818 +
Chr2	stalkie_big_nohaplotig	CDS	43363452	43363459	.	+	1	Parent=FBgn0041205.1.mrna1;Target=FBgn0041205.1 938 945 +
Chr2	stalkie_big_nohaplotig	CDS	43364189	43364262	.	+	2	Parent=FBgn0041205.1.mrna1;Target=FBgn0041205.1 1355 1428 +
Chr2	stalkie_big_nohaplotig	CDS	43364434	43364553	.	+	0	Parent=FBgn0041205.1.mrna1;Target=FBgn0041205.1 1429 1548 +
Chr2	gffcl	locus	43366409	43367377	.	+	.	ID=RLOC_00016958;geneIDs=ORF2232.path1;transcripts=ORF2232.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43366409	43367377	.	+	.	ID=ORF2232.mrna1;geneID=ORF2232.path1;Name=ORF2232;Dir=sensecoverage=99.9;identity=98.4;matches=879;mismatches=14;indels=0;unknowns=0;locus=RLOC_00016958
Chr2	stalkie_big_nohaplotig	exon	43366409	43366997	98	+	.	Parent=ORF2232.mrna1;Target=ORF2232 1 589 +
Chr2	stalkie_big_nohaplotig	exon	43367074	43367377	98	+	.	Parent=ORF2232.mrna1;Target=ORF2232 590 893 +
Chr2	stalkie_big_nohaplotig	CDS	43366409	43366997	.	+	0	Parent=ORF2232.mrna1;Target=ORF2232 1 589 +
Chr2	stalkie_big_nohaplotig	CDS	43367074	43367375	.	+	2	Parent=ORF2232.mrna1;Target=ORF2232 590 891 +
Chr2	gffcl	locus	43368204	43375691	.	-	.	ID=RLOC_00016959;geneIDs=FBgn0035065.1.path1;transcripts=FBgn0035065.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43368204	43375691	.	-	.	ID=FBgn0035065.1.mrna1;geneID=FBgn0035065.1.path1;Name=FBgn0035065.1;Dir=sensecoverage=100.0;identity=99.3;matches=1537;mismatches=11;indels=0;unknowns=0;locus=RLOC_00016959
Chr2	stalkie_big_nohaplotig	exon	43368204	43368289	100	-	.	Parent=FBgn0035065.1.mrna1;Target=FBgn0035065.1 1463 1548 +
Chr2	stalkie_big_nohaplotig	exon	43368355	43368814	99	-	.	Parent=FBgn0035065.1.mrna1;Target=FBgn0035065.1 1003 1462 +
Chr2	stalkie_big_nohaplotig	exon	43369203	43369312	100	-	.	Parent=FBgn0035065.1.mrna1;Target=FBgn0035065.1 893 1002 +
Chr2	stalkie_big_nohaplotig	exon	43374742	43374905	100	-	.	Parent=FBgn0035065.1.mrna1;Target=FBgn0035065.1 729 892 +
Chr2	stalkie_big_nohaplotig	exon	43374964	43375691	98	-	.	Parent=FBgn0035065.1.mrna1;Target=FBgn0035065.1 1 728 +
Chr2	stalkie_big_nohaplotig	CDS	43368204	43368289	.	-	2	Parent=FBgn0035065.1.mrna1;Target=FBgn0035065.1 1463 1548 +
Chr2	stalkie_big_nohaplotig	CDS	43368355	43368814	.	-	0	Parent=FBgn0035065.1.mrna1;Target=FBgn0035065.1 1003 1462 +
Chr2	stalkie_big_nohaplotig	CDS	43369203	43369312	.	-	2	Parent=FBgn0035065.1.mrna1;Target=FBgn0035065.1 893 1002 +
Chr2	stalkie_big_nohaplotig	CDS	43374742	43374905	.	-	1	Parent=FBgn0035065.1.mrna1;Target=FBgn0035065.1 729 892 +
Chr2	stalkie_big_nohaplotig	CDS	43374964	43375691	.	-	0	Parent=FBgn0035065.1.mrna1;Target=FBgn0035065.1 1 728 +
Chr2	gffcl	locus	43372006	43373499	.	-	.	ID=RLOC_00016960;geneIDs=FBgn0027544.1.path1;transcripts=FBgn0027544.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43372006	43373499	.	-	.	ID=FBgn0027544.1.mrna1;geneID=FBgn0027544.1.path1;Name=FBgn0027544.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1484;mismatches=10;indels=0;unknowns=0;Target=FBgn0027544.1 1494 1 .;locus=RLOC_00016960
Chr2	stalkie_big_nohaplotig	exon	43372006	43373499	99	-	.	Parent=FBgn0027544.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43372006	43373499	.	-	0	Parent=FBgn0027544.1.mrna1
Chr2	gffcl	locus	43381767	43382828	.	-	.	ID=RLOC_00016961;geneIDs=FBgn0033873.2.path1;transcripts=FBgn0033873.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43381767	43382828	.	-	.	ID=FBgn0033873.2.mrna1;geneID=FBgn0033873.2.path1;Name=FBgn0033873.2;Dir=sensecoverage=100.0;identity=98.3;matches=973;mismatches=17;indels=0;unknowns=0;locus=RLOC_00016961
Chr2	stalkie_big_nohaplotig	exon	43381767	43382669	98	-	.	Parent=FBgn0033873.2.mrna1;Target=FBgn0033873.2 88 990 +
Chr2	stalkie_big_nohaplotig	exon	43382742	43382828	93	-	.	Parent=FBgn0033873.2.mrna1;Target=FBgn0033873.2 1 87 +
Chr2	stalkie_big_nohaplotig	CDS	43381767	43382669	.	-	0	Parent=FBgn0033873.2.mrna1;Target=FBgn0033873.2 88 990 +
Chr2	stalkie_big_nohaplotig	CDS	43382742	43382828	.	-	0	Parent=FBgn0033873.2.mrna1;Target=FBgn0033873.2 1 87 +
Chr2	gffcl	locus	43402372	43403853	.	+	.	ID=RLOC_00016962;geneIDs=ORF720.path1;transcripts=ORF720.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43402372	43403853	.	+	.	ID=ORF720.mrna1;geneID=ORF720.path1;Name=ORF720;Dir=indeterminatecoverage=100.0;identity=97.6;matches=1452;mismatches=30;indels=6;unknowns=0;Target=ORF720 1488 1 .;locus=RLOC_00016962
Chr2	stalkie_big_nohaplotig	exon	43402372	43403853	97	+	.	Parent=ORF720.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43402372	43403853	.	+	0	Parent=ORF720.mrna1
Chr2	gffcl	locus	43417004	43418068	.	-	.	ID=RLOC_00016963;geneIDs=FBgn0085426.1.path1;transcripts=FBgn0085426.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43417004	43418068	.	-	.	ID=FBgn0085426.1.mrna1;geneID=FBgn0085426.1.path1;Name=FBgn0085426.1;Dir=sensecoverage=26.3;identity=99.7;matches=336;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016963
Chr2	stalkie_big_nohaplotig	exon	43417004	43417092	100	-	.	Parent=FBgn0085426.1.mrna1;Target=FBgn0085426.1 734 822 +
Chr2	stalkie_big_nohaplotig	exon	43417821	43418068	99	-	.	Parent=FBgn0085426.1.mrna1;Target=FBgn0085426.1 486 733 +
Chr2	stalkie_big_nohaplotig	CDS	43417004	43417092	.	-	2	Parent=FBgn0085426.1.mrna1;Target=FBgn0085426.1 734 822 +
Chr2	stalkie_big_nohaplotig	CDS	43417821	43418067	.	-	0	Parent=FBgn0085426.1.mrna1;Target=FBgn0085426.1 487 733 +
Chr2	gffcl	locus	43470627	43470968	.	-	.	ID=RLOC_00016964;geneIDs=comp135106_c0_seq1.path1;transcripts=comp135106_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43470627	43470968	.	-	.	ID=comp135106_c0_seq1.mrna1;geneID=comp135106_c0_seq1.path1;Name=comp135106_c0_seq1;Dir=indeterminatecoverage=94.0;identity=97.4;matches=334;mismatches=8;indels=1;unknowns=0;Target=comp135106_c0_seq1 365 23 .;CDS_Target=comp135106_c0_seq1 111 52 .;locus=RLOC_00016964
Chr2	stalkie_big_nohaplotig	exon	43470627	43470968	97	-	.	Parent=comp135106_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43470881	43470939	.	-	0	Parent=comp135106_c0_seq1.mrna1
Chr2	gffcl	locus	43482578	43483683	.	-	.	ID=RLOC_00016965;geneIDs=FBgn0033873.1.path1;transcripts=FBgn0033873.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43482578	43483683	.	-	.	ID=FBgn0033873.1.mrna1;geneID=FBgn0033873.1.path1;Name=FBgn0033873.1;Dir=sensecoverage=99.8;identity=98.1;matches=1031;mismatches=20;indels=0;unknowns=0;locus=RLOC_00016965
Chr2	stalkie_big_nohaplotig	exon	43482578	43483480	98	-	.	Parent=FBgn0033873.1.mrna1;Target=FBgn0033873.1 151 1053 +
Chr2	stalkie_big_nohaplotig	exon	43483536	43483683	95	-	.	Parent=FBgn0033873.1.mrna1;Target=FBgn0033873.1 3 150 +
Chr2	stalkie_big_nohaplotig	CDS	43482578	43483480	.	-	0	Parent=FBgn0033873.1.mrna1;Target=FBgn0033873.1 151 1053 +
Chr2	stalkie_big_nohaplotig	CDS	43483536	43483682	.	-	0	Parent=FBgn0033873.1.mrna1;Target=FBgn0033873.1 4 150 +
Chr2	gffcl	locus	43486903	43487453	.	+	.	ID=RLOC_00016966;geneIDs=comp150265_c0_seq1.path1;transcripts=comp150265_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43486903	43487453	.	+	.	ID=comp150265_c0_seq1.mrna1;geneID=comp150265_c0_seq1.path1;Name=comp150265_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=547;mismatches=4;indels=3;unknowns=0;Target=comp150265_c0_seq1 554 1 .;CDS_Target=comp150265_c0_seq1 118 2 .;locus=RLOC_00016966
Chr2	stalkie_big_nohaplotig	exon	43486903	43487453	98	+	.	Parent=comp150265_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43486904	43487019	.	+	0	Parent=comp150265_c0_seq1.mrna1
Chr2	gffcl	locus	43557640	43565327	.	+	.	ID=RLOC_00016967;geneIDs=FBgn0035023.1.path1,comp161546_c2_seq1.path1;transcripts=FBgn0035023.1.mrna1,comp161546_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43557640	43564669	.	+	.	ID=FBgn0035023.1.mrna1;geneID=FBgn0035023.1.path1;Name=FBgn0035023.1;Dir=sensecoverage=92.7;identity=99.7;matches=330;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016967
Chr2	stalkie_big_nohaplotig	exon	43557640	43557861	99	+	.	Parent=FBgn0035023.1.mrna1;Target=FBgn0035023.1 27 248 +
Chr2	stalkie_big_nohaplotig	exon	43564561	43564669	100	+	.	Parent=FBgn0035023.1.mrna1;Target=FBgn0035023.1 249 357 +
Chr2	stalkie_big_nohaplotig	CDS	43557641	43557861	.	+	0	Parent=FBgn0035023.1.mrna1;Target=FBgn0035023.1 28 248 +
Chr2	stalkie_big_nohaplotig	CDS	43564561	43564669	.	+	1	Parent=FBgn0035023.1.mrna1;Target=FBgn0035023.1 249 357 +
Chr2	stalkie_big_nohaplotig	mRNA	43561383	43565327	.	+	.	ID=comp161546_c2_seq1.mrna1;geneID=comp161546_c2_seq1.path1;Name=comp161546_c2_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=1317;mismatches=3;indels=2;unknowns=0;Target=comp161546_c2_seq1 1 222 +;locus=RLOC_00016967
Chr2	stalkie_big_nohaplotig	exon	43561383	43561937	99	+	.	Parent=comp161546_c2_seq1.mrna1;Target=comp161546_c2_seq1 1 553 +
Chr2	stalkie_big_nohaplotig	exon	43564561	43565327	99	+	.	Parent=comp161546_c2_seq1.mrna1;Target=comp161546_c2_seq1 554 1320 +
Chr2	stalkie_big_nohaplotig	CDS	43561383	43561606	.	+	0	Parent=comp161546_c2_seq1.mrna1
Chr2	gffcl	locus	43565385	43565774	.	-	.	ID=RLOC_00016968;geneIDs=comp178603_c0_seq1.path1;transcripts=comp178603_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43565385	43565774	.	-	.	ID=comp178603_c0_seq1.mrna1;geneID=comp178603_c0_seq1.path1;Name=comp178603_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=390;mismatches=0;indels=0;unknowns=0;Target=comp178603_c0_seq1 390 1 .;CDS_Target=comp178603_c0_seq1 262 161 .;locus=RLOC_00016968
Chr2	stalkie_big_nohaplotig	exon	43565385	43565774	100	-	.	Parent=comp178603_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43565513	43565614	.	-	0	Parent=comp178603_c0_seq1.mrna1
Chr2	gffcl	locus	43567388	43568861	.	-	.	ID=RLOC_00016969;geneIDs=ORF1693.path1;transcripts=ORF1693.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43567388	43568861	.	-	.	ID=ORF1693.mrna1;geneID=ORF1693.path1;Name=ORF1693;Dir=sensecoverage=100.0;identity=100.0;matches=1026;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016969
Chr2	stalkie_big_nohaplotig	exon	43567388	43567444	100	-	.	Parent=ORF1693.mrna1;Target=ORF1693 970 1026 +
Chr2	stalkie_big_nohaplotig	exon	43567893	43568861	100	-	.	Parent=ORF1693.mrna1;Target=ORF1693 1 969 +
Chr2	stalkie_big_nohaplotig	CDS	43567388	43567444	.	-	0	Parent=ORF1693.mrna1;Target=ORF1693 970 1026 +
Chr2	stalkie_big_nohaplotig	CDS	43567893	43568861	.	-	0	Parent=ORF1693.mrna1;Target=ORF1693 1 969 +
Chr2	gffcl	locus	43579512	43602244	.	.	.	ID=RLOC_00016971;geneIDs=comp64091_c0_seq1.path1,comp161068_c1_seq1.path1;transcripts=comp161068_c1_seq1.mrna1,comp64091_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43579512	43602014	.	-	.	ID=comp161068_c1_seq1.mrna1;geneID=comp161068_c1_seq1.path1;Name=comp161068_c1_seq1;Dir=sensecoverage=49.8;identity=99.7;matches=1404;mismatches=3;indels=1;unknowns=0;locus=RLOC_00016971
Chr2	stalkie_big_nohaplotig	exon	43579512	43580321	99	-	.	Parent=comp161068_c1_seq1.mrna1;Target=comp161068_c1_seq1 2018 2828 +
Chr2	stalkie_big_nohaplotig	exon	43580392	43580437	100	-	.	Parent=comp161068_c1_seq1.mrna1;Target=comp161068_c1_seq1 1972 2017 +
Chr2	stalkie_big_nohaplotig	exon	43580521	43580624	100	-	.	Parent=comp161068_c1_seq1.mrna1;Target=comp161068_c1_seq1 1868 1971 +
Chr2	stalkie_big_nohaplotig	exon	43580686	43581108	99	-	.	Parent=comp161068_c1_seq1.mrna1;Target=comp161068_c1_seq1 1445 1867 +
Chr2	stalkie_big_nohaplotig	exon	43595443	43595445	100	-	.	Parent=comp161068_c1_seq1.mrna1;Target=comp161068_c1_seq1 1442 1444 +
Chr2	stalkie_big_nohaplotig	exon	43599160	43599161	100	-	.	Parent=comp161068_c1_seq1.mrna1;Target=comp161068_c1_seq1 1440 1441 +
Chr2	stalkie_big_nohaplotig	exon	43600168	43600169	100	-	.	Parent=comp161068_c1_seq1.mrna1;Target=comp161068_c1_seq1 1438 1439 +
Chr2	stalkie_big_nohaplotig	exon	43600393	43600406	100	-	.	Parent=comp161068_c1_seq1.mrna1;Target=comp161068_c1_seq1 1424 1437 +
Chr2	stalkie_big_nohaplotig	exon	43602012	43602014	100	-	.	Parent=comp161068_c1_seq1.mrna1;Target=comp161068_c1_seq1 1421 1423 +
Chr2	stalkie_big_nohaplotig	CDS	43580116	43580321	.	-	2	Parent=comp161068_c1_seq1.mrna1;Target=comp161068_c1_seq1 2018 2223 +
Chr2	stalkie_big_nohaplotig	CDS	43580392	43580437	.	-	0	Parent=comp161068_c1_seq1.mrna1;Target=comp161068_c1_seq1 1972 2017 +
Chr2	stalkie_big_nohaplotig	CDS	43580521	43580601	.	-	0	Parent=comp161068_c1_seq1.mrna1;Target=comp161068_c1_seq1 1891 1971 +
Chr2	stalkie_big_nohaplotig	mRNA	43601718	43602244	.	+	.	ID=comp64091_c0_seq1.mrna1;geneID=comp64091_c0_seq1.path1;Name=comp64091_c0_seq1;Dir=indeterminatecoverage=89.1;identity=98.7;matches=524;mismatches=3;indels=4;unknowns=0;Target=comp64091_c0_seq1 531 1 .;CDS_Target=comp64091_c0_seq1 276 214 .;locus=RLOC_00016971
Chr2	stalkie_big_nohaplotig	exon	43601718	43602244	98	+	.	Parent=comp64091_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43601931	43601989	.	+	0	Parent=comp64091_c0_seq1.mrna1
Chr2	gffcl	locus	43592744	43594010	.	+	.	ID=RLOC_00016973;geneIDs=comp153838_c0_seq1.path1;transcripts=comp153838_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43592744	43594010	.	+	.	ID=comp153838_c0_seq1.mrna1;geneID=comp153838_c0_seq1.path1;Name=comp153838_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1267;mismatches=0;indels=1;unknowns=0;Target=comp153838_c0_seq1 1268 1 .;CDS_Target=comp153838_c0_seq1 395 315 .;locus=RLOC_00016973
Chr2	stalkie_big_nohaplotig	exon	43592744	43594010	99	+	.	Parent=comp153838_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43593058	43593138	.	+	0	Parent=comp153838_c0_seq1.mrna1
Chr2	gffcl	locus	43595941	43596021	.	+	.	ID=RLOC_00016974;geneIDs=comp148964_c0_seq1.path2;transcripts=comp148964_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	43595941	43596021	.	+	.	ID=comp148964_c0_seq1.mrna2;geneID=comp148964_c0_seq1.path2;Name=comp148964_c0_seq1;Dir=indeterminatecoverage=16.2;identity=86.4;matches=70;mismatches=3;indels=8;unknowns=0;Target=comp148964_c0_seq1 450 378 .;locus=RLOC_00016974
Chr2	stalkie_big_nohaplotig	exon	43595941	43596021	86	+	.	Parent=comp148964_c0_seq1.mrna2
Chr2	gffcl	locus	43596140	43599843	.	+	.	ID=RLOC_00016975;geneIDs=FBgn0035016.1.path1;transcripts=FBgn0035016.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43596140	43599843	.	+	.	ID=FBgn0035016.1.mrna1;geneID=FBgn0035016.1.path1;Name=FBgn0035016.1;Dir=sensecoverage=100.0;identity=99.8;matches=997;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016975
Chr2	stalkie_big_nohaplotig	exon	43596140	43596916	99	+	.	Parent=FBgn0035016.1.mrna1;Target=FBgn0035016.1 1 777 +
Chr2	stalkie_big_nohaplotig	exon	43599622	43599843	99	+	.	Parent=FBgn0035016.1.mrna1;Target=FBgn0035016.1 778 999 +
Chr2	stalkie_big_nohaplotig	CDS	43596140	43596916	.	+	0	Parent=FBgn0035016.1.mrna1;Target=FBgn0035016.1 1 777 +
Chr2	stalkie_big_nohaplotig	CDS	43599622	43599843	.	+	0	Parent=FBgn0035016.1.mrna1;Target=FBgn0035016.1 778 999 +
Chr2	gffcl	locus	43613319	43613629	.	+	.	ID=RLOC_00016976;geneIDs=comp322067_c0_seq1.path1;transcripts=comp322067_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43613319	43613629	.	+	.	ID=comp322067_c0_seq1.mrna1;geneID=comp322067_c0_seq1.path1;Name=comp322067_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=310;mismatches=1;indels=0;unknowns=0;Target=comp322067_c0_seq1 311 1 .;CDS_Target=comp322067_c0_seq1 25 2 .;locus=RLOC_00016976
Chr2	stalkie_big_nohaplotig	exon	43613319	43613629	99	+	.	Parent=comp322067_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43613320	43613343	.	+	0	Parent=comp322067_c0_seq1.mrna1
Chr2	gffcl	locus	43614003	43614439	.	+	.	ID=RLOC_00016977;geneIDs=comp146452_c0_seq1.path1;transcripts=comp146452_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43614003	43614439	.	+	.	ID=comp146452_c0_seq1.mrna1;geneID=comp146452_c0_seq1.path1;Name=comp146452_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=434;mismatches=1;indels=3;unknowns=0;Target=comp146452_c0_seq1 436 1 .;CDS_Target=comp146452_c0_seq1 386 240 .;locus=RLOC_00016977
Chr2	stalkie_big_nohaplotig	exon	43614003	43614439	99	+	.	Parent=comp146452_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43614241	43614389	.	+	0	Parent=comp146452_c0_seq1.mrna1
Chr2	gffcl	locus	43614709	43614995	.	+	.	ID=RLOC_00016978;geneIDs=comp145057_c0_seq1.path1;transcripts=comp145057_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43614709	43614995	.	+	.	ID=comp145057_c0_seq1.mrna1;geneID=comp145057_c0_seq1.path1;Name=comp145057_c0_seq1;Dir=indeterminatecoverage=75.5;identity=99.0;matches=284;mismatches=3;indels=0;unknowns=0;Target=comp145057_c0_seq1 380 94 .;CDS_Target=comp145057_c0_seq1 379 314 .;locus=RLOC_00016978
Chr2	stalkie_big_nohaplotig	exon	43614709	43614995	98	+	.	Parent=comp145057_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43614929	43614994	.	+	0	Parent=comp145057_c0_seq1.mrna1
Chr2	gffcl	locus	43617149	43617537	.	+	.	ID=RLOC_00016979;geneIDs=comp152353_c0_seq1.path1;transcripts=comp152353_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43617149	43617537	.	+	.	ID=comp152353_c0_seq1.mrna1;geneID=comp152353_c0_seq1.path1;Name=comp152353_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=382;mismatches=7;indels=0;unknowns=0;Target=comp152353_c0_seq1 389 1 .;CDS_Target=comp152353_c0_seq1 191 114 .;locus=RLOC_00016979
Chr2	stalkie_big_nohaplotig	exon	43617149	43617537	98	+	.	Parent=comp152353_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43617262	43617339	.	+	0	Parent=comp152353_c0_seq1.mrna1
Chr2	gffcl	locus	43618526	43854716	.	-	.	ID=RLOC_00016980;geneIDs=FBgn0011589.1.path1;transcripts=FBgn0011589.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43618526	43854716	.	-	.	ID=FBgn0011589.1.mrna1;geneID=FBgn0011589.1.path1;Name=FBgn0011589.1;Dir=sensecoverage=100.0;identity=100.0;matches=3981;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016980
Chr2	stalkie_big_nohaplotig	exon	43618526	43620385	100	-	.	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 2122 3981 +
Chr2	stalkie_big_nohaplotig	exon	43622069	43622193	100	-	.	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 1997 2121 +
Chr2	stalkie_big_nohaplotig	exon	43622390	43622543	100	-	.	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 1843 1996 +
Chr2	stalkie_big_nohaplotig	exon	43628292	43628387	100	-	.	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 1747 1842 +
Chr2	stalkie_big_nohaplotig	exon	43645158	43645238	100	-	.	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 1666 1746 +
Chr2	stalkie_big_nohaplotig	exon	43677826	43677944	100	-	.	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 1547 1665 +
Chr2	stalkie_big_nohaplotig	exon	43678031	43678210	100	-	.	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 1367 1546 +
Chr2	stalkie_big_nohaplotig	exon	43680603	43680807	100	-	.	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 1162 1366 +
Chr2	stalkie_big_nohaplotig	exon	43689781	43689944	100	-	.	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 998 1161 +
Chr2	stalkie_big_nohaplotig	exon	43690100	43690328	100	-	.	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 769 997 +
Chr2	stalkie_big_nohaplotig	exon	43690661	43690914	100	-	.	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 515 768 +
Chr2	stalkie_big_nohaplotig	exon	43710252	43710389	100	-	.	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 377 514 +
Chr2	stalkie_big_nohaplotig	exon	43714018	43714137	100	-	.	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 257 376 +
Chr2	stalkie_big_nohaplotig	exon	43714320	43714430	100	-	.	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 146 256 +
Chr2	stalkie_big_nohaplotig	exon	43731852	43731971	100	-	.	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 26 145 +
Chr2	stalkie_big_nohaplotig	exon	43854692	43854716	100	-	.	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 1 25 +
Chr2	stalkie_big_nohaplotig	CDS	43618526	43620385	.	-	0	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 2122 3981 +
Chr2	stalkie_big_nohaplotig	CDS	43622069	43622193	.	-	2	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 1997 2121 +
Chr2	stalkie_big_nohaplotig	CDS	43622390	43622543	.	-	0	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 1843 1996 +
Chr2	stalkie_big_nohaplotig	CDS	43628292	43628387	.	-	0	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 1747 1842 +
Chr2	stalkie_big_nohaplotig	CDS	43645158	43645238	.	-	0	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 1666 1746 +
Chr2	stalkie_big_nohaplotig	CDS	43677826	43677944	.	-	2	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 1547 1665 +
Chr2	stalkie_big_nohaplotig	CDS	43678031	43678210	.	-	2	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 1367 1546 +
Chr2	stalkie_big_nohaplotig	CDS	43680603	43680807	.	-	0	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 1162 1366 +
Chr2	stalkie_big_nohaplotig	CDS	43689781	43689944	.	-	2	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 998 1161 +
Chr2	stalkie_big_nohaplotig	CDS	43690100	43690328	.	-	0	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 769 997 +
Chr2	stalkie_big_nohaplotig	CDS	43690661	43690914	.	-	2	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 515 768 +
Chr2	stalkie_big_nohaplotig	CDS	43710252	43710389	.	-	2	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 377 514 +
Chr2	stalkie_big_nohaplotig	CDS	43714018	43714137	.	-	2	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 257 376 +
Chr2	stalkie_big_nohaplotig	CDS	43714320	43714430	.	-	2	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 146 256 +
Chr2	stalkie_big_nohaplotig	CDS	43731852	43731971	.	-	2	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 26 145 +
Chr2	stalkie_big_nohaplotig	CDS	43854692	43854716	.	-	0	Parent=FBgn0011589.1.mrna1;Target=FBgn0011589.1 1 25 +
Chr2	gffcl	locus	43633425	43634171	.	+	.	ID=RLOC_00016981;geneIDs=comp153565_c0_seq1.path1;transcripts=comp153565_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43633425	43634171	.	+	.	ID=comp153565_c0_seq1.mrna1;geneID=comp153565_c0_seq1.path1;Name=comp153565_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=747;mismatches=0;indels=0;unknowns=0;Target=comp153565_c0_seq1 747 1 .;CDS_Target=comp153565_c0_seq1 608 237 .;locus=RLOC_00016981
Chr2	stalkie_big_nohaplotig	exon	43633425	43634171	100	+	.	Parent=comp153565_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43633661	43634032	.	+	0	Parent=comp153565_c0_seq1.mrna1
Chr2	gffcl	locus	43786643	43789245	.	+	.	ID=RLOC_00016982;geneIDs=FBgn0261362.1.path1;transcripts=FBgn0261362.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43786643	43789245	.	+	.	ID=FBgn0261362.1.mrna1;geneID=FBgn0261362.1.path1;Name=FBgn0261362.1;Dir=sensecoverage=100.0;identity=100.0;matches=2115;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016982
Chr2	stalkie_big_nohaplotig	exon	43786643	43786873	100	+	.	Parent=FBgn0261362.1.mrna1;Target=FBgn0261362.1 1 231 +
Chr2	stalkie_big_nohaplotig	exon	43786934	43787109	100	+	.	Parent=FBgn0261362.1.mrna1;Target=FBgn0261362.1 232 407 +
Chr2	stalkie_big_nohaplotig	exon	43787178	43787358	100	+	.	Parent=FBgn0261362.1.mrna1;Target=FBgn0261362.1 408 588 +
Chr2	stalkie_big_nohaplotig	exon	43787433	43787882	100	+	.	Parent=FBgn0261362.1.mrna1;Target=FBgn0261362.1 589 1038 +
Chr2	stalkie_big_nohaplotig	exon	43787944	43788571	100	+	.	Parent=FBgn0261362.1.mrna1;Target=FBgn0261362.1 1039 1666 +
Chr2	stalkie_big_nohaplotig	exon	43788658	43788913	100	+	.	Parent=FBgn0261362.1.mrna1;Target=FBgn0261362.1 1667 1922 +
Chr2	stalkie_big_nohaplotig	exon	43789053	43789245	100	+	.	Parent=FBgn0261362.1.mrna1;Target=FBgn0261362.1 1923 2115 +
Chr2	stalkie_big_nohaplotig	CDS	43786643	43786873	.	+	0	Parent=FBgn0261362.1.mrna1;Target=FBgn0261362.1 1 231 +
Chr2	stalkie_big_nohaplotig	CDS	43786934	43787109	.	+	0	Parent=FBgn0261362.1.mrna1;Target=FBgn0261362.1 232 407 +
Chr2	stalkie_big_nohaplotig	CDS	43787178	43787358	.	+	1	Parent=FBgn0261362.1.mrna1;Target=FBgn0261362.1 408 588 +
Chr2	stalkie_big_nohaplotig	CDS	43787433	43787882	.	+	0	Parent=FBgn0261362.1.mrna1;Target=FBgn0261362.1 589 1038 +
Chr2	stalkie_big_nohaplotig	CDS	43787944	43788571	.	+	0	Parent=FBgn0261362.1.mrna1;Target=FBgn0261362.1 1039 1666 +
Chr2	stalkie_big_nohaplotig	CDS	43788658	43788913	.	+	2	Parent=FBgn0261362.1.mrna1;Target=FBgn0261362.1 1667 1922 +
Chr2	stalkie_big_nohaplotig	CDS	43789053	43789245	.	+	1	Parent=FBgn0261362.1.mrna1;Target=FBgn0261362.1 1923 2115 +
Chr2	gffcl	locus	43845347	43846206	.	-	.	ID=RLOC_00016983;geneIDs=comp115814_c0_seq1.path1;transcripts=comp115814_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43845347	43846206	.	-	.	ID=comp115814_c0_seq1.mrna1;geneID=comp115814_c0_seq1.path1;Name=comp115814_c0_seq1;Dir=indeterminatecoverage=97.2;identity=93.4;matches=815;mismatches=43;indels=15;unknowns=0;Target=comp115814_c0_seq1 894 24 .;CDS_Target=comp115814_c0_seq1 585 502 .;locus=RLOC_00016983
Chr2	stalkie_big_nohaplotig	exon	43845347	43846206	93	-	.	Parent=comp115814_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43845656	43845739	.	-	0	Parent=comp115814_c0_seq1.mrna1
Chr2	gffcl	locus	43868847	45865139	.	-	.	ID=RLOC_00016984;geneIDs=FBgn0033039.1.path1,comp162602_c0_seq1.path1,comp163436_c2_seq1.path1;transcripts=comp162602_c0_seq1.mrna1,comp163436_c2_seq1.mrna1,FBgn0033039.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43868847	45865139	.	-	.	ID=comp162602_c0_seq1.mrna1;geneID=comp162602_c0_seq1.path1;Name=comp162602_c0_seq1;Dir=sensecoverage=91.1;identity=88.2;matches=1553;mismatches=114;indels=93;unknowns=0;locus=RLOC_00016984
Chr2	stalkie_big_nohaplotig	exon	43868847	43868858	83	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1842 1853 +
Chr2	stalkie_big_nohaplotig	exon	43877853	43877861	66	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1833 1841 +
Chr2	stalkie_big_nohaplotig	exon	43882916	43882932	94	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1816 1832 +
Chr2	stalkie_big_nohaplotig	exon	43891226	43891229	100	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1812 1815 +
Chr2	stalkie_big_nohaplotig	exon	43903286	43903289	100	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1808 1811 +
Chr2	stalkie_big_nohaplotig	exon	43904029	43904031	100	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1805 1807 +
Chr2	stalkie_big_nohaplotig	exon	43904929	43904934	100	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1799 1804 +
Chr2	stalkie_big_nohaplotig	exon	43912623	43912626	100	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1795 1798 +
Chr2	stalkie_big_nohaplotig	exon	43920168	43920173	100	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1789 1794 +
Chr2	stalkie_big_nohaplotig	exon	43921920	43921922	100	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1786 1788 +
Chr2	stalkie_big_nohaplotig	exon	43925668	43925728	56	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1702 1775 +
Chr2	stalkie_big_nohaplotig	exon	43927221	43927231	100	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1691 1701 +
Chr2	stalkie_big_nohaplotig	exon	43937065	43937090	47	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1649 1690 +
Chr2	stalkie_big_nohaplotig	exon	43958896	43958977	52	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1576 1648 +
Chr2	stalkie_big_nohaplotig	exon	43959467	43959507	43	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1500 1575 +
Chr2	stalkie_big_nohaplotig	exon	43965642	43965674	53	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1459 1499 +
Chr2	stalkie_big_nohaplotig	exon	43972260	43972269	100	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1449 1458 +
Chr2	stalkie_big_nohaplotig	exon	45804141	45804150	100	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1347 1356 +
Chr2	stalkie_big_nohaplotig	exon	45808520	45808528	100	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1338 1346 +
Chr2	stalkie_big_nohaplotig	exon	45815361	45815362	100	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1336 1337 +
Chr2	stalkie_big_nohaplotig	exon	45830058	45830060	100	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1333 1335 +
Chr2	stalkie_big_nohaplotig	exon	45836245	45836254	100	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1314 1323 +
Chr2	stalkie_big_nohaplotig	exon	45837484	45837490	100	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1307 1313 +
Chr2	stalkie_big_nohaplotig	exon	45844092	45844294	99	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1103 1306 +
Chr2	stalkie_big_nohaplotig	exon	45858655	45859118	94	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 639 1102 +
Chr2	stalkie_big_nohaplotig	exon	45864501	45865139	96	-	.	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1 638 +
Chr2	stalkie_big_nohaplotig	CDS	45804141	45804150	.	-	0	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1347 1356 +
Chr2	stalkie_big_nohaplotig	CDS	45808520	45808528	.	-	0	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1338 1346 +
Chr2	stalkie_big_nohaplotig	CDS	45815361	45815362	.	-	2	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1336 1337 +
Chr2	stalkie_big_nohaplotig	CDS	45830058	45830060	.	-	2	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1333 1335 +
Chr2	stalkie_big_nohaplotig	CDS	45836245	45836254	.	-	0	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1314 1323 +
Chr2	stalkie_big_nohaplotig	CDS	45837484	45837490	.	-	1	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1307 1313 +
Chr2	stalkie_big_nohaplotig	CDS	45844092	45844294	.	-	0	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1103 1306 +
Chr2	stalkie_big_nohaplotig	CDS	45858655	45858708	.	-	0	Parent=comp162602_c0_seq1.mrna1;Target=comp162602_c0_seq1 1049 1102 +
Chr2	stalkie_big_nohaplotig	mRNA	45728033	45823233	.	-	.	ID=comp163436_c2_seq1.mrna1;geneID=comp163436_c2_seq1.path1;Name=comp163436_c2_seq1;Dir=sensecoverage=86.0;identity=98.8;matches=5839;mismatches=68;indels=4;unknowns=0;locus=RLOC_00016984
Chr2	stalkie_big_nohaplotig	exon	45728033	45728037	100	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 6057 6061 +
Chr2	stalkie_big_nohaplotig	exon	45729915	45729925	90	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 6046 6056 +
Chr2	stalkie_big_nohaplotig	exon	45732244	45732256	92	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 6033 6045 +
Chr2	stalkie_big_nohaplotig	exon	45733130	45733132	100	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 6030 6032 +
Chr2	stalkie_big_nohaplotig	exon	45748185	45748195	100	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 6019 6029 +
Chr2	stalkie_big_nohaplotig	exon	45749647	45749680	62	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 5984 6018 +
Chr2	stalkie_big_nohaplotig	exon	45754911	45755228	96	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 5663 5983 +
Chr2	stalkie_big_nohaplotig	exon	45755678	45755776	100	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 5564 5662 +
Chr2	stalkie_big_nohaplotig	exon	45762901	45762948	100	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 5516 5563 +
Chr2	stalkie_big_nohaplotig	exon	45769309	45769450	100	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 5374 5515 +
Chr2	stalkie_big_nohaplotig	exon	45778417	45778569	95	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 5221 5373 +
Chr2	stalkie_big_nohaplotig	exon	45792744	45792890	99	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 5074 5220 +
Chr2	stalkie_big_nohaplotig	exon	45793039	45793272	99	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 4840 5073 +
Chr2	stalkie_big_nohaplotig	exon	45793357	45793455	100	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 4741 4839 +
Chr2	stalkie_big_nohaplotig	exon	45793593	45793711	97	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 4622 4740 +
Chr2	stalkie_big_nohaplotig	exon	45809255	45809360	100	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 4516 4621 +
Chr2	stalkie_big_nohaplotig	exon	45812414	45812539	100	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 4390 4515 +
Chr2	stalkie_big_nohaplotig	exon	45815096	45815362	98	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 4123 4389 +
Chr2	stalkie_big_nohaplotig	exon	45815426	45815606	99	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 3942 4122 +
Chr2	stalkie_big_nohaplotig	exon	45817373	45817484	100	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 3683 3794 +
Chr2	stalkie_big_nohaplotig	exon	45817542	45817745	98	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 3479 3682 +
Chr2	stalkie_big_nohaplotig	exon	45817810	45817942	96	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 3346 3478 +
Chr2	stalkie_big_nohaplotig	exon	45818016	45818112	98	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 3249 3345 +
Chr2	stalkie_big_nohaplotig	exon	45819409	45819686	100	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 2971 3248 +
Chr2	stalkie_big_nohaplotig	exon	45819749	45819991	99	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 2728 2970 +
Chr2	stalkie_big_nohaplotig	exon	45820212	45821582	99	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 1357 2727 +
Chr2	stalkie_big_nohaplotig	exon	45821641	45821797	100	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 1200 1356 +
Chr2	stalkie_big_nohaplotig	exon	45821861	45822318	98	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 742 1199 +
Chr2	stalkie_big_nohaplotig	exon	45822378	45822858	99	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 261 741 +
Chr2	stalkie_big_nohaplotig	exon	45822977	45823233	99	-	.	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 4 260 +
Chr2	stalkie_big_nohaplotig	CDS	45755119	45755228	.	-	2	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 5663 5772 +
Chr2	stalkie_big_nohaplotig	CDS	45755678	45755776	.	-	2	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 5564 5662 +
Chr2	stalkie_big_nohaplotig	CDS	45762901	45762948	.	-	2	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 5516 5563 +
Chr2	stalkie_big_nohaplotig	CDS	45769309	45769450	.	-	0	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 5374 5515 +
Chr2	stalkie_big_nohaplotig	CDS	45778417	45778569	.	-	0	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 5221 5373 +
Chr2	stalkie_big_nohaplotig	CDS	45792744	45792890	.	-	0	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 5074 5220 +
Chr2	stalkie_big_nohaplotig	CDS	45793039	45793272	.	-	0	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 4840 5073 +
Chr2	stalkie_big_nohaplotig	CDS	45793357	45793455	.	-	0	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 4741 4839 +
Chr2	stalkie_big_nohaplotig	CDS	45793593	45793711	.	-	2	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 4622 4740 +
Chr2	stalkie_big_nohaplotig	CDS	45809255	45809360	.	-	0	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 4516 4621 +
Chr2	stalkie_big_nohaplotig	CDS	45812414	45812539	.	-	0	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 4390 4515 +
Chr2	stalkie_big_nohaplotig	CDS	45815096	45815362	.	-	0	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 4123 4389 +
Chr2	stalkie_big_nohaplotig	CDS	45815426	45815606	.	-	1	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 3942 4122 +
Chr2	stalkie_big_nohaplotig	CDS	45817373	45817484	.	-	2	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 3683 3794 +
Chr2	stalkie_big_nohaplotig	CDS	45817542	45817745	.	-	2	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 3479 3682 +
Chr2	stalkie_big_nohaplotig	CDS	45817810	45817942	.	-	0	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 3346 3478 +
Chr2	stalkie_big_nohaplotig	CDS	45818016	45818112	.	-	1	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 3249 3345 +
Chr2	stalkie_big_nohaplotig	CDS	45819409	45819686	.	-	0	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 2971 3248 +
Chr2	stalkie_big_nohaplotig	CDS	45819749	45819991	.	-	0	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 2728 2970 +
Chr2	stalkie_big_nohaplotig	CDS	45820212	45821582	.	-	0	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 1357 2727 +
Chr2	stalkie_big_nohaplotig	CDS	45821641	45821797	.	-	1	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 1200 1356 +
Chr2	stalkie_big_nohaplotig	CDS	45821861	45822318	.	-	0	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 742 1199 +
Chr2	stalkie_big_nohaplotig	CDS	45822378	45822858	.	-	1	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 261 741 +
Chr2	stalkie_big_nohaplotig	CDS	45822977	45823233	.	-	0	Parent=comp163436_c2_seq1.mrna1;Target=comp163436_c2_seq1 4 260 +
Chr2	stalkie_big_nohaplotig	mRNA	45755122	45823233	.	-	.	ID=FBgn0033039.1.mrna1;geneID=FBgn0033039.1.path1;Name=FBgn0033039.1;Dir=sensecoverage=99.9;identity=99.2;matches=5592;mismatches=47;indels=0;unknowns=0;locus=RLOC_00016984
Chr2	stalkie_big_nohaplotig	exon	45755122	45755228	100	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 5663 5769 +
Chr2	stalkie_big_nohaplotig	exon	45755678	45755776	100	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 5564 5662 +
Chr2	stalkie_big_nohaplotig	exon	45762901	45762948	100	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 5516 5563 +
Chr2	stalkie_big_nohaplotig	exon	45769309	45769450	100	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 5374 5515 +
Chr2	stalkie_big_nohaplotig	exon	45778417	45778569	95	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 5221 5373 +
Chr2	stalkie_big_nohaplotig	exon	45792744	45792890	99	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 5074 5220 +
Chr2	stalkie_big_nohaplotig	exon	45793039	45793272	99	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 4840 5073 +
Chr2	stalkie_big_nohaplotig	exon	45793357	45793455	100	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 4741 4839 +
Chr2	stalkie_big_nohaplotig	exon	45793593	45793711	97	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 4622 4740 +
Chr2	stalkie_big_nohaplotig	exon	45809255	45809360	100	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 4516 4621 +
Chr2	stalkie_big_nohaplotig	exon	45812414	45812539	100	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 4390 4515 +
Chr2	stalkie_big_nohaplotig	exon	45815096	45815362	98	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 4123 4389 +
Chr2	stalkie_big_nohaplotig	exon	45815426	45815626	99	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 3922 4122 +
Chr2	stalkie_big_nohaplotig	exon	45817373	45817484	100	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 3683 3794 +
Chr2	stalkie_big_nohaplotig	exon	45817542	45817745	98	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 3479 3682 +
Chr2	stalkie_big_nohaplotig	exon	45817810	45817942	96	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 3346 3478 +
Chr2	stalkie_big_nohaplotig	exon	45818016	45818112	98	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 3249 3345 +
Chr2	stalkie_big_nohaplotig	exon	45819409	45819686	100	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 2971 3248 +
Chr2	stalkie_big_nohaplotig	exon	45819749	45819991	99	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 2728 2970 +
Chr2	stalkie_big_nohaplotig	exon	45820212	45821582	99	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 1357 2727 +
Chr2	stalkie_big_nohaplotig	exon	45821641	45821797	100	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 1200 1356 +
Chr2	stalkie_big_nohaplotig	exon	45821861	45822318	98	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 742 1199 +
Chr2	stalkie_big_nohaplotig	exon	45822378	45822858	99	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 261 741 +
Chr2	stalkie_big_nohaplotig	exon	45822977	45823233	99	-	.	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 4 260 +
Chr2	stalkie_big_nohaplotig	CDS	45755122	45755228	.	-	0	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 5663 5769 +
Chr2	stalkie_big_nohaplotig	CDS	45755678	45755776	.	-	0	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 5564 5662 +
Chr2	stalkie_big_nohaplotig	CDS	45762901	45762948	.	-	0	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 5516 5563 +
Chr2	stalkie_big_nohaplotig	CDS	45769309	45769450	.	-	1	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 5374 5515 +
Chr2	stalkie_big_nohaplotig	CDS	45778417	45778569	.	-	1	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 5221 5373 +
Chr2	stalkie_big_nohaplotig	CDS	45792744	45792890	.	-	1	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 5074 5220 +
Chr2	stalkie_big_nohaplotig	CDS	45793039	45793272	.	-	1	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 4840 5073 +
Chr2	stalkie_big_nohaplotig	CDS	45793357	45793455	.	-	1	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 4741 4839 +
Chr2	stalkie_big_nohaplotig	CDS	45793593	45793711	.	-	0	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 4622 4740 +
Chr2	stalkie_big_nohaplotig	CDS	45809255	45809360	.	-	1	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 4516 4621 +
Chr2	stalkie_big_nohaplotig	CDS	45812414	45812539	.	-	1	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 4390 4515 +
Chr2	stalkie_big_nohaplotig	CDS	45815096	45815362	.	-	1	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 4123 4389 +
Chr2	stalkie_big_nohaplotig	CDS	45815426	45815626	.	-	1	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 3922 4122 +
Chr2	stalkie_big_nohaplotig	CDS	45817373	45817484	.	-	2	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 3683 3794 +
Chr2	stalkie_big_nohaplotig	CDS	45817542	45817745	.	-	2	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 3479 3682 +
Chr2	stalkie_big_nohaplotig	CDS	45817810	45817942	.	-	0	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 3346 3478 +
Chr2	stalkie_big_nohaplotig	CDS	45818016	45818112	.	-	1	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 3249 3345 +
Chr2	stalkie_big_nohaplotig	CDS	45819409	45819686	.	-	0	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 2971 3248 +
Chr2	stalkie_big_nohaplotig	CDS	45819749	45819991	.	-	0	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 2728 2970 +
Chr2	stalkie_big_nohaplotig	CDS	45820212	45821582	.	-	0	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 1357 2727 +
Chr2	stalkie_big_nohaplotig	CDS	45821641	45821797	.	-	1	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 1200 1356 +
Chr2	stalkie_big_nohaplotig	CDS	45821861	45822318	.	-	0	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 742 1199 +
Chr2	stalkie_big_nohaplotig	CDS	45822378	45822858	.	-	1	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 261 741 +
Chr2	stalkie_big_nohaplotig	CDS	45822977	45823233	.	-	0	Parent=FBgn0033039.1.mrna1;Target=FBgn0033039.1 4 260 +
Chr2	gffcl	locus	43885441	43896914	.	+	.	ID=RLOC_00016985;geneIDs=FBgn0033402.1.path1;transcripts=FBgn0033402.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43885441	43896914	.	+	.	ID=FBgn0033402.1.mrna1;geneID=FBgn0033402.1.path1;Name=FBgn0033402.1;Dir=sensecoverage=100.0;identity=100.0;matches=1416;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016985
Chr2	stalkie_big_nohaplotig	exon	43885441	43885846	100	+	.	Parent=FBgn0033402.1.mrna1;Target=FBgn0033402.1 1 406 +
Chr2	stalkie_big_nohaplotig	exon	43895712	43895980	100	+	.	Parent=FBgn0033402.1.mrna1;Target=FBgn0033402.1 407 675 +
Chr2	stalkie_big_nohaplotig	exon	43896039	43896207	100	+	.	Parent=FBgn0033402.1.mrna1;Target=FBgn0033402.1 676 844 +
Chr2	stalkie_big_nohaplotig	exon	43896272	43896470	100	+	.	Parent=FBgn0033402.1.mrna1;Target=FBgn0033402.1 845 1043 +
Chr2	stalkie_big_nohaplotig	exon	43896542	43896914	100	+	.	Parent=FBgn0033402.1.mrna1;Target=FBgn0033402.1 1044 1416 +
Chr2	stalkie_big_nohaplotig	CDS	43885441	43885846	.	+	0	Parent=FBgn0033402.1.mrna1;Target=FBgn0033402.1 1 406 +
Chr2	stalkie_big_nohaplotig	CDS	43895712	43895980	.	+	2	Parent=FBgn0033402.1.mrna1;Target=FBgn0033402.1 407 675 +
Chr2	stalkie_big_nohaplotig	CDS	43896039	43896207	.	+	0	Parent=FBgn0033402.1.mrna1;Target=FBgn0033402.1 676 844 +
Chr2	stalkie_big_nohaplotig	CDS	43896272	43896470	.	+	2	Parent=FBgn0033402.1.mrna1;Target=FBgn0033402.1 845 1043 +
Chr2	stalkie_big_nohaplotig	CDS	43896542	43896914	.	+	1	Parent=FBgn0033402.1.mrna1;Target=FBgn0033402.1 1044 1416 +
Chr2	gffcl	locus	43900632	43902484	.	-	.	ID=RLOC_00016986;geneIDs=comp160109_c0_seq1.path1;transcripts=comp160109_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43900632	43902484	.	-	.	ID=comp160109_c0_seq1.mrna1;geneID=comp160109_c0_seq1.path1;Name=comp160109_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.3;matches=1804;mismatches=21;indels=30;unknowns=0;Target=comp160109_c0_seq1 1829 3 .;CDS_Target=comp160109_c0_seq1 1455 1282 .;locus=RLOC_00016986
Chr2	stalkie_big_nohaplotig	exon	43900632	43902484	97	-	.	Parent=comp160109_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43901006	43901179	.	-	0	Parent=comp160109_c0_seq1.mrna1
Chr2	gffcl	locus	43902509	43902877	.	-	.	ID=RLOC_00016987;geneIDs=comp149733_c0_seq1.path1;transcripts=comp149733_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43902509	43902877	.	-	.	ID=comp149733_c0_seq1.mrna1;geneID=comp149733_c0_seq1.path1;Name=comp149733_c0_seq1;Dir=indeterminatecoverage=95.1;identity=100.0;matches=369;mismatches=0;indels=0;unknowns=0;Target=comp149733_c0_seq1 388 20 .;CDS_Target=comp149733_c0_seq1 142 20 .;locus=RLOC_00016987
Chr2	stalkie_big_nohaplotig	exon	43902509	43902877	100	-	.	Parent=comp149733_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43902755	43902877	.	-	0	Parent=comp149733_c0_seq1.mrna1
Chr2	gffcl	locus	43941389	43948703	.	+	.	ID=RLOC_00016988;geneIDs=comp145112_c0_seq1.path1;transcripts=comp145112_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43941389	43948703	.	+	.	ID=comp145112_c0_seq1.mrna1;geneID=comp145112_c0_seq1.path1;Name=comp145112_c0_seq1;Dir=sensecoverage=99.7;identity=99.0;matches=390;mismatches=4;indels=0;unknowns=0;locus=RLOC_00016988
Chr2	stalkie_big_nohaplotig	exon	43941389	43941541	100	+	.	Parent=comp145112_c0_seq1.mrna1;Target=comp145112_c0_seq1 2 154 +
Chr2	stalkie_big_nohaplotig	exon	43948343	43948424	98	+	.	Parent=comp145112_c0_seq1.mrna1;Target=comp145112_c0_seq1 155 236 +
Chr2	stalkie_big_nohaplotig	exon	43948545	43948703	98	+	.	Parent=comp145112_c0_seq1.mrna1;Target=comp145112_c0_seq1 237 395 +
Chr2	stalkie_big_nohaplotig	CDS	43941527	43941541	.	+	0	Parent=comp145112_c0_seq1.mrna1;Target=comp145112_c0_seq1 140 154 +
Chr2	stalkie_big_nohaplotig	CDS	43948343	43948424	.	+	0	Parent=comp145112_c0_seq1.mrna1;Target=comp145112_c0_seq1 155 236 +
Chr2	stalkie_big_nohaplotig	CDS	43948545	43948636	.	+	2	Parent=comp145112_c0_seq1.mrna1;Target=comp145112_c0_seq1 237 328 +
Chr2	gffcl	locus	43950703	43952143	.	+	.	ID=RLOC_00016989;geneIDs=FBgn0033191.1.path1;transcripts=FBgn0033191.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43950703	43952143	.	+	.	ID=FBgn0033191.1.mrna1;geneID=FBgn0033191.1.path1;Name=FBgn0033191.1;Dir=sensecoverage=100.0;identity=100.0;matches=1086;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016989
Chr2	stalkie_big_nohaplotig	exon	43950703	43950908	100	+	.	Parent=FBgn0033191.1.mrna1;Target=FBgn0033191.1 1 206 +
Chr2	stalkie_big_nohaplotig	exon	43950969	43951086	100	+	.	Parent=FBgn0033191.1.mrna1;Target=FBgn0033191.1 207 324 +
Chr2	stalkie_big_nohaplotig	exon	43951186	43951367	100	+	.	Parent=FBgn0033191.1.mrna1;Target=FBgn0033191.1 325 506 +
Chr2	stalkie_big_nohaplotig	exon	43951425	43951683	100	+	.	Parent=FBgn0033191.1.mrna1;Target=FBgn0033191.1 507 765 +
Chr2	stalkie_big_nohaplotig	exon	43951757	43951933	100	+	.	Parent=FBgn0033191.1.mrna1;Target=FBgn0033191.1 766 942 +
Chr2	stalkie_big_nohaplotig	exon	43952000	43952143	100	+	.	Parent=FBgn0033191.1.mrna1;Target=FBgn0033191.1 943 1086 +
Chr2	stalkie_big_nohaplotig	CDS	43950703	43950908	.	+	0	Parent=FBgn0033191.1.mrna1;Target=FBgn0033191.1 1 206 +
Chr2	stalkie_big_nohaplotig	CDS	43950969	43951086	.	+	1	Parent=FBgn0033191.1.mrna1;Target=FBgn0033191.1 207 324 +
Chr2	stalkie_big_nohaplotig	CDS	43951186	43951367	.	+	0	Parent=FBgn0033191.1.mrna1;Target=FBgn0033191.1 325 506 +
Chr2	stalkie_big_nohaplotig	CDS	43951425	43951683	.	+	1	Parent=FBgn0033191.1.mrna1;Target=FBgn0033191.1 507 765 +
Chr2	stalkie_big_nohaplotig	CDS	43951757	43951933	.	+	0	Parent=FBgn0033191.1.mrna1;Target=FBgn0033191.1 766 942 +
Chr2	stalkie_big_nohaplotig	CDS	43952000	43952143	.	+	0	Parent=FBgn0033191.1.mrna1;Target=FBgn0033191.1 943 1086 +
Chr2	gffcl	locus	43979754	43982026	.	+	.	ID=RLOC_00016990;geneIDs=FBgn0034894.1.path1;transcripts=FBgn0034894.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43979754	43982026	.	+	.	ID=FBgn0034894.1.mrna1;geneID=FBgn0034894.1.path1;Name=FBgn0034894.1;Dir=sensecoverage=99.8;identity=99.8;matches=571;mismatches=1;indels=0;unknowns=0;locus=RLOC_00016990
Chr2	stalkie_big_nohaplotig	exon	43979754	43979914	99	+	.	Parent=FBgn0034894.1.mrna1;Target=FBgn0034894.1 2 162 +
Chr2	stalkie_big_nohaplotig	exon	43980011	43980148	100	+	.	Parent=FBgn0034894.1.mrna1;Target=FBgn0034894.1 163 300 +
Chr2	stalkie_big_nohaplotig	exon	43981754	43982026	100	+	.	Parent=FBgn0034894.1.mrna1;Target=FBgn0034894.1 301 573 +
Chr2	stalkie_big_nohaplotig	CDS	43979756	43979914	.	+	0	Parent=FBgn0034894.1.mrna1;Target=FBgn0034894.1 4 162 +
Chr2	stalkie_big_nohaplotig	CDS	43980011	43980148	.	+	0	Parent=FBgn0034894.1.mrna1;Target=FBgn0034894.1 163 300 +
Chr2	stalkie_big_nohaplotig	CDS	43981754	43982026	.	+	0	Parent=FBgn0034894.1.mrna1;Target=FBgn0034894.1 301 573 +
Chr2	gffcl	locus	43982687	43983426	.	-	.	ID=RLOC_00016991;geneIDs=comp149840_c0_seq1.path1;transcripts=comp149840_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43982687	43983426	.	-	.	ID=comp149840_c0_seq1.mrna1;geneID=comp149840_c0_seq1.path1;Name=comp149840_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=736;mismatches=4;indels=1;unknowns=0;Target=comp149840_c0_seq1 741 1 .;CDS_Target=comp149840_c0_seq1 188 3 .;locus=RLOC_00016991
Chr2	stalkie_big_nohaplotig	exon	43982687	43983426	99	-	.	Parent=comp149840_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43983239	43983424	.	-	0	Parent=comp149840_c0_seq1.mrna1
Chr2	gffcl	locus	43983536	43983975	.	-	.	ID=RLOC_00016992;geneIDs=comp136017_c0_seq1.path1;transcripts=comp136017_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43983536	43983975	.	-	.	ID=comp136017_c0_seq1.mrna1;geneID=comp136017_c0_seq1.path1;Name=comp136017_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=437;mismatches=3;indels=1;unknowns=0;Target=comp136017_c0_seq1 441 1 .;CDS_Target=comp136017_c0_seq1 251 126 .;locus=RLOC_00016992
Chr2	stalkie_big_nohaplotig	exon	43983536	43983975	99	-	.	Parent=comp136017_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	43983726	43983850	.	-	0	Parent=comp136017_c0_seq1.mrna1
Chr2	gffcl	locus	43984504	44030586	.	-	.	ID=RLOC_00016993;geneIDs=comp155234_c0_seq1.path1;transcripts=comp155234_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43984504	44030586	.	-	.	ID=comp155234_c0_seq1.mrna1;geneID=comp155234_c0_seq1.path1;Name=comp155234_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=736;mismatches=1;indels=0;unknowns=0;Target=comp155234_c0_seq1 96 230 .;locus=RLOC_00016993
Chr2	stalkie_big_nohaplotig	exon	43984504	43984840	100	-	.	Parent=comp155234_c0_seq1.mrna1;Target=comp155234_c0_seq1 1 337 -
Chr2	stalkie_big_nohaplotig	exon	44030187	44030586	99	-	.	Parent=comp155234_c0_seq1.mrna1;Target=comp155234_c0_seq1 338 737 -
Chr2	stalkie_big_nohaplotig	CDS	43984599	43984733	.	-	0	Parent=comp155234_c0_seq1.mrna1
Chr2	gffcl	locus	43986758	43987464	.	-	.	ID=RLOC_00016994;geneIDs=FBgn0034893.1.path1;transcripts=FBgn0034893.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43986758	43987464	.	-	.	ID=FBgn0034893.1.mrna1;geneID=FBgn0034893.1.path1;Name=FBgn0034893.1;Dir=sensecoverage=100.0;identity=100.0;matches=585;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016994
Chr2	stalkie_big_nohaplotig	exon	43986758	43987092	100	-	.	Parent=FBgn0034893.1.mrna1;Target=FBgn0034893.1 251 585 +
Chr2	stalkie_big_nohaplotig	exon	43987152	43987258	100	-	.	Parent=FBgn0034893.1.mrna1;Target=FBgn0034893.1 144 250 +
Chr2	stalkie_big_nohaplotig	exon	43987322	43987464	100	-	.	Parent=FBgn0034893.1.mrna1;Target=FBgn0034893.1 1 143 +
Chr2	stalkie_big_nohaplotig	CDS	43986758	43987092	.	-	2	Parent=FBgn0034893.1.mrna1;Target=FBgn0034893.1 251 585 +
Chr2	stalkie_big_nohaplotig	CDS	43987152	43987258	.	-	1	Parent=FBgn0034893.1.mrna1;Target=FBgn0034893.1 144 250 +
Chr2	stalkie_big_nohaplotig	CDS	43987322	43987464	.	-	0	Parent=FBgn0034893.1.mrna1;Target=FBgn0034893.1 1 143 +
Chr2	gffcl	locus	43988801	44054734	.	+	.	ID=RLOC_00016995;geneIDs=FBgn0050183.1.path1;transcripts=FBgn0050183.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	43988801	44054734	.	+	.	ID=FBgn0050183.1.mrna1;geneID=FBgn0050183.1.path1;Name=FBgn0050183.1;Dir=sensecoverage=100.0;identity=99.7;matches=4821;mismatches=15;indels=0;unknowns=0;locus=RLOC_00016995
Chr2	stalkie_big_nohaplotig	exon	43988801	43988993	99	+	.	Parent=FBgn0050183.1.mrna1;Target=FBgn0050183.1 1 193 +
Chr2	stalkie_big_nohaplotig	exon	43989367	43989779	100	+	.	Parent=FBgn0050183.1.mrna1;Target=FBgn0050183.1 194 606 +
Chr2	stalkie_big_nohaplotig	exon	43989846	43990623	100	+	.	Parent=FBgn0050183.1.mrna1;Target=FBgn0050183.1 607 1384 +
Chr2	stalkie_big_nohaplotig	exon	44038920	44039950	98	+	.	Parent=FBgn0050183.1.mrna1;Target=FBgn0050183.1 1385 2415 +
Chr2	stalkie_big_nohaplotig	exon	44048537	44049181	100	+	.	Parent=FBgn0050183.1.mrna1;Target=FBgn0050183.1 2416 3060 +
Chr2	stalkie_big_nohaplotig	exon	44049248	44049484	100	+	.	Parent=FBgn0050183.1.mrna1;Target=FBgn0050183.1 3061 3297 +
Chr2	stalkie_big_nohaplotig	exon	44053139	44054053	100	+	.	Parent=FBgn0050183.1.mrna1;Target=FBgn0050183.1 3298 4212 +
Chr2	stalkie_big_nohaplotig	exon	44054111	44054734	100	+	.	Parent=FBgn0050183.1.mrna1;Target=FBgn0050183.1 4213 4836 +
Chr2	stalkie_big_nohaplotig	CDS	43988801	43988993	.	+	0	Parent=FBgn0050183.1.mrna1;Target=FBgn0050183.1 1 193 +
Chr2	stalkie_big_nohaplotig	CDS	43989367	43989779	.	+	2	Parent=FBgn0050183.1.mrna1;Target=FBgn0050183.1 194 606 +
Chr2	stalkie_big_nohaplotig	CDS	43989846	43990623	.	+	0	Parent=FBgn0050183.1.mrna1;Target=FBgn0050183.1 607 1384 +
Chr2	stalkie_big_nohaplotig	CDS	44038920	44039950	.	+	2	Parent=FBgn0050183.1.mrna1;Target=FBgn0050183.1 1385 2415 +
Chr2	stalkie_big_nohaplotig	CDS	44048537	44049181	.	+	0	Parent=FBgn0050183.1.mrna1;Target=FBgn0050183.1 2416 3060 +
Chr2	stalkie_big_nohaplotig	CDS	44049248	44049484	.	+	0	Parent=FBgn0050183.1.mrna1;Target=FBgn0050183.1 3061 3297 +
Chr2	stalkie_big_nohaplotig	CDS	44053139	44054053	.	+	0	Parent=FBgn0050183.1.mrna1;Target=FBgn0050183.1 3298 4212 +
Chr2	stalkie_big_nohaplotig	CDS	44054111	44054734	.	+	0	Parent=FBgn0050183.1.mrna1;Target=FBgn0050183.1 4213 4836 +
Chr2	gffcl	locus	44044282	44046252	.	-	.	ID=RLOC_00016996;geneIDs=FBgn0038038.3.path1;transcripts=FBgn0038038.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44044282	44046252	.	-	.	ID=FBgn0038038.3.mrna1;geneID=FBgn0038038.3.path1;Name=FBgn0038038.3;Dir=sensecoverage=100.0;identity=100.0;matches=1335;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016996
Chr2	stalkie_big_nohaplotig	exon	44044282	44044381	100	-	.	Parent=FBgn0038038.3.mrna1;Target=FBgn0038038.3 1236 1335 +
Chr2	stalkie_big_nohaplotig	exon	44044438	44044776	100	-	.	Parent=FBgn0038038.3.mrna1;Target=FBgn0038038.3 897 1235 +
Chr2	stalkie_big_nohaplotig	exon	44044838	44044984	100	-	.	Parent=FBgn0038038.3.mrna1;Target=FBgn0038038.3 750 896 +
Chr2	stalkie_big_nohaplotig	exon	44045052	44045250	100	-	.	Parent=FBgn0038038.3.mrna1;Target=FBgn0038038.3 551 749 +
Chr2	stalkie_big_nohaplotig	exon	44045583	44045817	100	-	.	Parent=FBgn0038038.3.mrna1;Target=FBgn0038038.3 316 550 +
Chr2	stalkie_big_nohaplotig	exon	44045883	44046008	100	-	.	Parent=FBgn0038038.3.mrna1;Target=FBgn0038038.3 190 315 +
Chr2	stalkie_big_nohaplotig	exon	44046064	44046252	100	-	.	Parent=FBgn0038038.3.mrna1;Target=FBgn0038038.3 1 189 +
Chr2	stalkie_big_nohaplotig	CDS	44044282	44044381	.	-	1	Parent=FBgn0038038.3.mrna1;Target=FBgn0038038.3 1236 1335 +
Chr2	stalkie_big_nohaplotig	CDS	44044438	44044776	.	-	1	Parent=FBgn0038038.3.mrna1;Target=FBgn0038038.3 897 1235 +
Chr2	stalkie_big_nohaplotig	CDS	44044838	44044984	.	-	1	Parent=FBgn0038038.3.mrna1;Target=FBgn0038038.3 750 896 +
Chr2	stalkie_big_nohaplotig	CDS	44045052	44045250	.	-	2	Parent=FBgn0038038.3.mrna1;Target=FBgn0038038.3 551 749 +
Chr2	stalkie_big_nohaplotig	CDS	44045583	44045817	.	-	0	Parent=FBgn0038038.3.mrna1;Target=FBgn0038038.3 316 550 +
Chr2	stalkie_big_nohaplotig	CDS	44045883	44046008	.	-	0	Parent=FBgn0038038.3.mrna1;Target=FBgn0038038.3 190 315 +
Chr2	stalkie_big_nohaplotig	CDS	44046064	44046252	.	-	0	Parent=FBgn0038038.3.mrna1;Target=FBgn0038038.3 1 189 +
Chr2	gffcl	locus	44060306	44063537	.	-	.	ID=RLOC_00016997;geneIDs=FBgn0262728.1.path1;transcripts=FBgn0262728.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44060306	44063537	.	-	.	ID=FBgn0262728.1.mrna1;geneID=FBgn0262728.1.path1;Name=FBgn0262728.1;Dir=sensecoverage=100.0;identity=99.8;matches=1234;mismatches=2;indels=0;unknowns=0;locus=RLOC_00016997
Chr2	stalkie_big_nohaplotig	exon	44060306	44060606	99	-	.	Parent=FBgn0262728.1.mrna1;Target=FBgn0262728.1 936 1236 +
Chr2	stalkie_big_nohaplotig	exon	44060702	44060801	99	-	.	Parent=FBgn0262728.1.mrna1;Target=FBgn0262728.1 836 935 +
Chr2	stalkie_big_nohaplotig	exon	44060912	44060999	100	-	.	Parent=FBgn0262728.1.mrna1;Target=FBgn0262728.1 748 835 +
Chr2	stalkie_big_nohaplotig	exon	44062457	44062570	100	-	.	Parent=FBgn0262728.1.mrna1;Target=FBgn0262728.1 634 747 +
Chr2	stalkie_big_nohaplotig	exon	44062744	44062942	100	-	.	Parent=FBgn0262728.1.mrna1;Target=FBgn0262728.1 435 633 +
Chr2	stalkie_big_nohaplotig	exon	44063027	44063262	100	-	.	Parent=FBgn0262728.1.mrna1;Target=FBgn0262728.1 199 434 +
Chr2	stalkie_big_nohaplotig	exon	44063340	44063537	100	-	.	Parent=FBgn0262728.1.mrna1;Target=FBgn0262728.1 1 198 +
Chr2	stalkie_big_nohaplotig	CDS	44060306	44060606	.	-	1	Parent=FBgn0262728.1.mrna1;Target=FBgn0262728.1 936 1236 +
Chr2	stalkie_big_nohaplotig	CDS	44060702	44060801	.	-	2	Parent=FBgn0262728.1.mrna1;Target=FBgn0262728.1 836 935 +
Chr2	stalkie_big_nohaplotig	CDS	44060912	44060999	.	-	0	Parent=FBgn0262728.1.mrna1;Target=FBgn0262728.1 748 835 +
Chr2	stalkie_big_nohaplotig	CDS	44062457	44062570	.	-	0	Parent=FBgn0262728.1.mrna1;Target=FBgn0262728.1 634 747 +
Chr2	stalkie_big_nohaplotig	CDS	44062744	44062942	.	-	1	Parent=FBgn0262728.1.mrna1;Target=FBgn0262728.1 435 633 +
Chr2	stalkie_big_nohaplotig	CDS	44063027	44063262	.	-	0	Parent=FBgn0262728.1.mrna1;Target=FBgn0262728.1 199 434 +
Chr2	stalkie_big_nohaplotig	CDS	44063340	44063537	.	-	0	Parent=FBgn0262728.1.mrna1;Target=FBgn0262728.1 1 198 +
Chr2	gffcl	locus	44065081	44065585	.	-	.	ID=RLOC_00016998;geneIDs=FBgn0034889.path1;transcripts=FBgn0034889.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44065081	44065585	.	-	.	ID=FBgn0034889.mrna1;geneID=FBgn0034889.path1;Name=FBgn0034889;Dir=sensecoverage=100.0;identity=100.0;matches=300;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016998
Chr2	stalkie_big_nohaplotig	exon	44065081	44065165	100	-	.	Parent=FBgn0034889.mrna1;Target=FBgn0034889 216 300 +
Chr2	stalkie_big_nohaplotig	exon	44065247	44065329	100	-	.	Parent=FBgn0034889.mrna1;Target=FBgn0034889 133 215 +
Chr2	stalkie_big_nohaplotig	exon	44065385	44065495	100	-	.	Parent=FBgn0034889.mrna1;Target=FBgn0034889 22 132 +
Chr2	stalkie_big_nohaplotig	exon	44065565	44065585	100	-	.	Parent=FBgn0034889.mrna1;Target=FBgn0034889 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	44065081	44065165	.	-	1	Parent=FBgn0034889.mrna1;Target=FBgn0034889 216 300 +
Chr2	stalkie_big_nohaplotig	CDS	44065247	44065329	.	-	0	Parent=FBgn0034889.mrna1;Target=FBgn0034889 133 215 +
Chr2	stalkie_big_nohaplotig	CDS	44065385	44065495	.	-	0	Parent=FBgn0034889.mrna1;Target=FBgn0034889 22 132 +
Chr2	stalkie_big_nohaplotig	CDS	44065565	44065585	.	-	0	Parent=FBgn0034889.mrna1;Target=FBgn0034889 1 21 +
Chr2	gffcl	locus	44071727	44072442	.	+	.	ID=RLOC_00016999;geneIDs=FBgn0011296.1.path1;transcripts=FBgn0011296.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44071727	44072442	.	+	.	ID=FBgn0011296.1.mrna1;geneID=FBgn0011296.1.path1;Name=FBgn0011296.1;Dir=sensecoverage=99.8;identity=100.0;matches=569;mismatches=0;indels=0;unknowns=0;locus=RLOC_00016999
Chr2	stalkie_big_nohaplotig	exon	44071727	44071829	100	+	.	Parent=FBgn0011296.1.mrna1;Target=FBgn0011296.1 2 104 +
Chr2	stalkie_big_nohaplotig	exon	44071912	44072204	100	+	.	Parent=FBgn0011296.1.mrna1;Target=FBgn0011296.1 105 397 +
Chr2	stalkie_big_nohaplotig	exon	44072270	44072442	100	+	.	Parent=FBgn0011296.1.mrna1;Target=FBgn0011296.1 398 570 +
Chr2	stalkie_big_nohaplotig	CDS	44071729	44071829	.	+	0	Parent=FBgn0011296.1.mrna1;Target=FBgn0011296.1 4 104 +
Chr2	stalkie_big_nohaplotig	CDS	44071912	44072204	.	+	1	Parent=FBgn0011296.1.mrna1;Target=FBgn0011296.1 105 397 +
Chr2	stalkie_big_nohaplotig	CDS	44072270	44072442	.	+	2	Parent=FBgn0011296.1.mrna1;Target=FBgn0011296.1 398 570 +
Chr2	gffcl	locus	44073943	44075342	.	-	.	ID=RLOC_00017000;geneIDs=FBgn0034888.2.path1;transcripts=FBgn0034888.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44073943	44075342	.	-	.	ID=FBgn0034888.2.mrna1;geneID=FBgn0034888.2.path1;Name=FBgn0034888.2;Dir=sensecoverage=100.0;identity=99.6;matches=989;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017000
Chr2	stalkie_big_nohaplotig	exon	44073943	44074090	100	-	.	Parent=FBgn0034888.2.mrna1;Target=FBgn0034888.2 846 993 +
Chr2	stalkie_big_nohaplotig	exon	44074152	44074227	100	-	.	Parent=FBgn0034888.2.mrna1;Target=FBgn0034888.2 770 845 +
Chr2	stalkie_big_nohaplotig	exon	44074453	44074777	99	-	.	Parent=FBgn0034888.2.mrna1;Target=FBgn0034888.2 445 769 +
Chr2	stalkie_big_nohaplotig	exon	44074837	44074969	100	-	.	Parent=FBgn0034888.2.mrna1;Target=FBgn0034888.2 312 444 +
Chr2	stalkie_big_nohaplotig	exon	44075032	44075342	99	-	.	Parent=FBgn0034888.2.mrna1;Target=FBgn0034888.2 1 311 +
Chr2	stalkie_big_nohaplotig	CDS	44073943	44074090	.	-	1	Parent=FBgn0034888.2.mrna1;Target=FBgn0034888.2 846 993 +
Chr2	stalkie_big_nohaplotig	CDS	44074152	44074227	.	-	2	Parent=FBgn0034888.2.mrna1;Target=FBgn0034888.2 770 845 +
Chr2	stalkie_big_nohaplotig	CDS	44074453	44074777	.	-	0	Parent=FBgn0034888.2.mrna1;Target=FBgn0034888.2 445 769 +
Chr2	stalkie_big_nohaplotig	CDS	44074837	44074969	.	-	1	Parent=FBgn0034888.2.mrna1;Target=FBgn0034888.2 312 444 +
Chr2	stalkie_big_nohaplotig	CDS	44075032	44075342	.	-	0	Parent=FBgn0034888.2.mrna1;Target=FBgn0034888.2 1 311 +
Chr2	gffcl	locus	44076118	44078622	.	-	.	ID=RLOC_00017001;geneIDs=FBgn0034888.1.path1;transcripts=FBgn0034888.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44076118	44078622	.	-	.	ID=FBgn0034888.1.mrna1;geneID=FBgn0034888.1.path1;Name=FBgn0034888.1;Dir=sensecoverage=100.0;identity=99.5;matches=1009;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017001
Chr2	stalkie_big_nohaplotig	exon	44076118	44076250	100	-	.	Parent=FBgn0034888.1.mrna1;Target=FBgn0034888.1 882 1014 +
Chr2	stalkie_big_nohaplotig	exon	44077184	44077259	100	-	.	Parent=FBgn0034888.1.mrna1;Target=FBgn0034888.1 806 881 +
Chr2	stalkie_big_nohaplotig	exon	44077473	44077797	99	-	.	Parent=FBgn0034888.1.mrna1;Target=FBgn0034888.1 481 805 +
Chr2	stalkie_big_nohaplotig	exon	44077858	44077990	100	-	.	Parent=FBgn0034888.1.mrna1;Target=FBgn0034888.1 348 480 +
Chr2	stalkie_big_nohaplotig	exon	44078276	44078622	98	-	.	Parent=FBgn0034888.1.mrna1;Target=FBgn0034888.1 1 347 +
Chr2	stalkie_big_nohaplotig	CDS	44076118	44076250	.	-	1	Parent=FBgn0034888.1.mrna1;Target=FBgn0034888.1 882 1014 +
Chr2	stalkie_big_nohaplotig	CDS	44077184	44077259	.	-	2	Parent=FBgn0034888.1.mrna1;Target=FBgn0034888.1 806 881 +
Chr2	stalkie_big_nohaplotig	CDS	44077473	44077797	.	-	0	Parent=FBgn0034888.1.mrna1;Target=FBgn0034888.1 481 805 +
Chr2	stalkie_big_nohaplotig	CDS	44077858	44077990	.	-	1	Parent=FBgn0034888.1.mrna1;Target=FBgn0034888.1 348 480 +
Chr2	stalkie_big_nohaplotig	CDS	44078276	44078622	.	-	0	Parent=FBgn0034888.1.mrna1;Target=FBgn0034888.1 1 347 +
Chr2	gffcl	locus	44103976	44104281	.	-	.	ID=RLOC_00017002;geneIDs=comp138464_c0_seq1.path1;transcripts=comp138464_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44103976	44104281	.	-	.	ID=comp138464_c0_seq1.mrna1;geneID=comp138464_c0_seq1.path1;Name=comp138464_c0_seq1;Dir=indeterminatecoverage=93.8;identity=88.8;matches=230;mismatches=18;indels=11;unknowns=0;locus=RLOC_00017002
Chr2	stalkie_big_nohaplotig	exon	44103976	44104172	87	-	.	Parent=comp138464_c0_seq1.mrna1;Target=comp138464_c0_seq1 272 73 .
Chr2	stalkie_big_nohaplotig	exon	44104227	44104281	94	-	.	Parent=comp138464_c0_seq1.mrna1;Target=comp138464_c0_seq1 72 18 .
Chr2	stalkie_big_nohaplotig	CDS	44104124	44104172	.	-	1	Parent=comp138464_c0_seq1.mrna1;Target=comp138464_c0_seq1 121 73 .
Chr2	stalkie_big_nohaplotig	CDS	44104227	44104279	.	-	0	Parent=comp138464_c0_seq1.mrna1;Target=comp138464_c0_seq1 72 20 .
Chr2	gffcl	locus	44110279	44113783	.	+	.	ID=RLOC_00017003;geneIDs=FBgn0034887.1.path1;transcripts=FBgn0034887.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44110279	44113783	.	+	.	ID=FBgn0034887.1.mrna1;geneID=FBgn0034887.1.path1;Name=FBgn0034887.1;Dir=sensecoverage=100.0;identity=99.9;matches=1148;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017003
Chr2	stalkie_big_nohaplotig	exon	44110279	44110422	99	+	.	Parent=FBgn0034887.1.mrna1;Target=FBgn0034887.1 1 144 +
Chr2	stalkie_big_nohaplotig	exon	44112566	44112900	100	+	.	Parent=FBgn0034887.1.mrna1;Target=FBgn0034887.1 145 479 +
Chr2	stalkie_big_nohaplotig	exon	44112955	44113087	100	+	.	Parent=FBgn0034887.1.mrna1;Target=FBgn0034887.1 480 612 +
Chr2	stalkie_big_nohaplotig	exon	44113153	44113550	100	+	.	Parent=FBgn0034887.1.mrna1;Target=FBgn0034887.1 613 1010 +
Chr2	stalkie_big_nohaplotig	exon	44113645	44113783	100	+	.	Parent=FBgn0034887.1.mrna1;Target=FBgn0034887.1 1011 1149 +
Chr2	stalkie_big_nohaplotig	CDS	44110279	44110422	.	+	0	Parent=FBgn0034887.1.mrna1;Target=FBgn0034887.1 1 144 +
Chr2	stalkie_big_nohaplotig	CDS	44112566	44112900	.	+	0	Parent=FBgn0034887.1.mrna1;Target=FBgn0034887.1 145 479 +
Chr2	stalkie_big_nohaplotig	CDS	44112955	44113087	.	+	1	Parent=FBgn0034887.1.mrna1;Target=FBgn0034887.1 480 612 +
Chr2	stalkie_big_nohaplotig	CDS	44113153	44113550	.	+	0	Parent=FBgn0034887.1.mrna1;Target=FBgn0034887.1 613 1010 +
Chr2	stalkie_big_nohaplotig	CDS	44113645	44113783	.	+	1	Parent=FBgn0034887.1.mrna1;Target=FBgn0034887.1 1011 1149 +
Chr2	gffcl	locus	44136342	44174544	.	+	.	ID=RLOC_00017004;geneIDs=FBgn0034886.1.path1;transcripts=FBgn0034886.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44136342	44174544	.	+	.	ID=FBgn0034886.1.mrna1;geneID=FBgn0034886.1.path1;Name=FBgn0034886.1;Dir=sensecoverage=7.8;identity=99.5;matches=193;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017004
Chr2	stalkie_big_nohaplotig	exon	44136342	44136428	98	+	.	Parent=FBgn0034886.1.mrna1;Target=FBgn0034886.1 38 124 +
Chr2	stalkie_big_nohaplotig	exon	44174438	44174544	100	+	.	Parent=FBgn0034886.1.mrna1;Target=FBgn0034886.1 125 231 +
Chr2	stalkie_big_nohaplotig	CDS	44136344	44136428	.	+	0	Parent=FBgn0034886.1.mrna1;Target=FBgn0034886.1 40 124 +
Chr2	stalkie_big_nohaplotig	CDS	44174438	44174544	.	+	2	Parent=FBgn0034886.1.mrna1;Target=FBgn0034886.1 125 231 +
Chr2	gffcl	locus	44171666	45142630	.	-	.	ID=RLOC_00017005;geneIDs=comp157653_c0_seq1.path1;transcripts=comp157653_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44171666	45142630	.	-	.	ID=comp157653_c0_seq1.mrna1;geneID=comp157653_c0_seq1.path1;Name=comp157653_c0_seq1;Dir=antisensecoverage=88.8;identity=88.3;matches=1498;mismatches=115;indels=83;unknowns=0;Target=comp157653_c0_seq1 1616 1630 .;locus=RLOC_00017005
Chr2	stalkie_big_nohaplotig	exon	44171666	44172173	97	-	.	Parent=comp157653_c0_seq1.mrna1;Target=comp157653_c0_seq1 1 508 -
Chr2	stalkie_big_nohaplotig	exon	44172245	44172925	92	-	.	Parent=comp157653_c0_seq1.mrna1;Target=comp157653_c0_seq1 509 1203 -
Chr2	stalkie_big_nohaplotig	exon	44173069	44173262	97	-	.	Parent=comp157653_c0_seq1.mrna1;Target=comp157653_c0_seq1 1204 1397 -
Chr2	stalkie_big_nohaplotig	exon	44186589	44186617	50	-	.	Parent=comp157653_c0_seq1.mrna1;Target=comp157653_c0_seq1 1398 1432 -
Chr2	stalkie_big_nohaplotig	exon	45032668	45032670	100	-	.	Parent=comp157653_c0_seq1.mrna1;Target=comp157653_c0_seq1 1433 1435 -
Chr2	stalkie_big_nohaplotig	exon	45047077	45047155	36	-	.	Parent=comp157653_c0_seq1.mrna1;Target=comp157653_c0_seq1 1436 1475 -
Chr2	stalkie_big_nohaplotig	exon	45061823	45061827	100	-	.	Parent=comp157653_c0_seq1.mrna1;Target=comp157653_c0_seq1 1476 1480 -
Chr2	stalkie_big_nohaplotig	exon	45065880	45065888	100	-	.	Parent=comp157653_c0_seq1.mrna1;Target=comp157653_c0_seq1 1481 1489 -
Chr2	stalkie_big_nohaplotig	exon	45080826	45080835	100	-	.	Parent=comp157653_c0_seq1.mrna1;Target=comp157653_c0_seq1 1490 1499 -
Chr2	stalkie_big_nohaplotig	exon	45083626	45083692	50	-	.	Parent=comp157653_c0_seq1.mrna1;Target=comp157653_c0_seq1 1504 1572 -
Chr2	stalkie_big_nohaplotig	exon	45087032	45087034	100	-	.	Parent=comp157653_c0_seq1.mrna1;Target=comp157653_c0_seq1 1573 1575 -
Chr2	stalkie_big_nohaplotig	exon	45091692	45091700	100	-	.	Parent=comp157653_c0_seq1.mrna1;Target=comp157653_c0_seq1 1576 1584 -
Chr2	stalkie_big_nohaplotig	exon	45092860	45092863	100	-	.	Parent=comp157653_c0_seq1.mrna1;Target=comp157653_c0_seq1 1585 1588 -
Chr2	stalkie_big_nohaplotig	exon	45112060	45112111	51	-	.	Parent=comp157653_c0_seq1.mrna1;Target=comp157653_c0_seq1 1589 1632 -
Chr2	stalkie_big_nohaplotig	exon	45117395	45117401	100	-	.	Parent=comp157653_c0_seq1.mrna1;Target=comp157653_c0_seq1 1633 1639 -
Chr2	stalkie_big_nohaplotig	exon	45129276	45129280	100	-	.	Parent=comp157653_c0_seq1.mrna1;Target=comp157653_c0_seq1 1640 1644 -
Chr2	stalkie_big_nohaplotig	exon	45142629	45142630	100	-	.	Parent=comp157653_c0_seq1.mrna1;Target=comp157653_c0_seq1 1645 1646 -
Chr2	stalkie_big_nohaplotig	CDS	45112091	45112109	.	-	0	Parent=comp157653_c0_seq1.mrna1
Chr2	gffcl	locus	44173337	44173543	.	+	.	ID=RLOC_00017006;geneIDs=comp157653_c0_seq1.path2;transcripts=comp157653_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	44173337	44173543	.	+	.	ID=comp157653_c0_seq1.mrna2;geneID=comp157653_c0_seq1.path2;Name=comp157653_c0_seq1;Dir=indeterminatecoverage=11.2;identity=95.2;matches=197;mismatches=10;indels=0;unknowns=0;Target=comp157653_c0_seq1 1853 1647 .;locus=RLOC_00017006
Chr2	stalkie_big_nohaplotig	exon	44173337	44173543	95	+	.	Parent=comp157653_c0_seq1.mrna2
Chr2	gffcl	locus	44191993	44193446	.	-	.	ID=RLOC_00017007;geneIDs=comp160047_c0_seq1.path2;transcripts=comp160047_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	44191993	44193446	.	-	.	ID=comp160047_c0_seq1.mrna2;geneID=comp160047_c0_seq1.path2;Name=comp160047_c0_seq1;Dir=indeterminatecoverage=31.9;identity=99.9;matches=1454;mismatches=0;indels=1;unknowns=0;Target=comp160047_c0_seq1 4501 3047 .;locus=RLOC_00017007
Chr2	stalkie_big_nohaplotig	exon	44191993	44193446	99	-	.	Parent=comp160047_c0_seq1.mrna2
Chr2	gffcl	locus	44212962	44214383	.	+	.	ID=RLOC_00017008;geneIDs=ORF799.path1;transcripts=ORF799.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44212962	44214383	.	+	.	ID=ORF799.mrna1;geneID=ORF799.path1;Name=ORF799;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1422;mismatches=0;indels=0;unknowns=0;Target=ORF799 1422 1 .;locus=RLOC_00017008
Chr2	stalkie_big_nohaplotig	exon	44212962	44214383	100	+	.	Parent=ORF799.mrna1
Chr2	stalkie_big_nohaplotig	CDS	44212962	44214383	.	+	0	Parent=ORF799.mrna1
Chr2	gffcl	locus	44259726	44261075	.	+	.	ID=RLOC_00017009;geneIDs=ORF914.path1;transcripts=ORF914.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44259726	44261075	.	+	.	ID=ORF914.mrna1;geneID=ORF914.path1;Name=ORF914;Dir=indeterminatecoverage=100.0;identity=96.4;matches=1304;mismatches=44;indels=4;unknowns=0;Target=ORF914 1350 1 .;locus=RLOC_00017009
Chr2	stalkie_big_nohaplotig	exon	44259726	44261075	96	+	.	Parent=ORF914.mrna1
Chr2	stalkie_big_nohaplotig	CDS	44259726	44261075	.	+	0	Parent=ORF914.mrna1
Chr2	gffcl	locus	44300516	44300797	.	+	.	ID=RLOC_00017010;geneIDs=comp99275_c1_seq1.path1;transcripts=comp99275_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44300516	44300797	.	+	.	ID=comp99275_c1_seq1.mrna1;geneID=comp99275_c1_seq1.path1;Name=comp99275_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=282;mismatches=0;indels=0;unknowns=0;Target=comp99275_c1_seq1 282 1 .;CDS_Target=comp99275_c1_seq1 282 160 .;locus=RLOC_00017010
Chr2	stalkie_big_nohaplotig	exon	44300516	44300797	100	+	.	Parent=comp99275_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	44300675	44300797	.	+	0	Parent=comp99275_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44510040	44510128	.	+	.	ID=comp136026_c1_seq1.mrna1;geneID=comp136026_c1_seq1.path1;Name=comp136026_c1_seq1;Dir=indeterminatecoverage=21.7;identity=97.8;matches=87;mismatches=2;indels=0;unknowns=0;Target=comp136026_c1_seq1 89 1 .;locus=RLOC_00017011
Chr2	stalkie_big_nohaplotig	exon	44510040	44510128	97	+	.	Parent=comp136026_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	44510040	44510128	.	+	0	Parent=comp136026_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44901586	44902329	.	-	.	ID=comp143384_c0_seq1.mrna1;geneID=comp143384_c0_seq1.path1;Name=comp143384_c0_seq1;Dir=sensecoverage=96.8;identity=99.8;matches=574;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017011
Chr2	stalkie_big_nohaplotig	exon	44901586	44901927	100	-	.	Parent=comp143384_c0_seq1.mrna1;Target=comp143384_c0_seq1 247 588 +
Chr2	stalkie_big_nohaplotig	exon	44902040	44902160	100	-	.	Parent=comp143384_c0_seq1.mrna1;Target=comp143384_c0_seq1 126 246 +
Chr2	stalkie_big_nohaplotig	exon	44902218	44902329	99	-	.	Parent=comp143384_c0_seq1.mrna1;Target=comp143384_c0_seq1 14 125 +
Chr2	stalkie_big_nohaplotig	CDS	44901586	44901927	.	-	0	Parent=comp143384_c0_seq1.mrna1;Target=comp143384_c0_seq1 247 588 +
Chr2	stalkie_big_nohaplotig	CDS	44902040	44902160	.	-	1	Parent=comp143384_c0_seq1.mrna1;Target=comp143384_c0_seq1 126 246 +
Chr2	stalkie_big_nohaplotig	CDS	44902218	44902255	.	-	0	Parent=comp143384_c0_seq1.mrna1;Target=comp143384_c0_seq1 88 125 +
Chr2	gffcl	locus	44427174	44428224	.	+	.	ID=RLOC_00017012;geneIDs=FBgn0031657.2.path1;transcripts=FBgn0031657.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44427174	44428224	.	+	.	ID=FBgn0031657.2.mrna1;geneID=FBgn0031657.2.path1;Name=FBgn0031657.2;Dir=sensecoverage=100.0;identity=99.9;matches=998;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017012
Chr2	stalkie_big_nohaplotig	exon	44427174	44427316	99	+	.	Parent=FBgn0031657.2.mrna1;Target=FBgn0031657.2 1 143 +
Chr2	stalkie_big_nohaplotig	exon	44427369	44428224	100	+	.	Parent=FBgn0031657.2.mrna1;Target=FBgn0031657.2 144 999 +
Chr2	stalkie_big_nohaplotig	CDS	44427174	44427316	.	+	0	Parent=FBgn0031657.2.mrna1;Target=FBgn0031657.2 1 143 +
Chr2	stalkie_big_nohaplotig	CDS	44427369	44428224	.	+	1	Parent=FBgn0031657.2.mrna1;Target=FBgn0031657.2 144 999 +
Chr2	gffcl	locus	44437442	44438277	.	-	.	ID=RLOC_00017013;geneIDs=comp130686_c0_seq1.path1;transcripts=comp130686_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44437442	44438277	.	-	.	ID=comp130686_c0_seq1.mrna1;geneID=comp130686_c0_seq1.path1;Name=comp130686_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=836;mismatches=0;indels=0;unknowns=0;Target=comp130686_c0_seq1 836 1 .;CDS_Target=comp130686_c0_seq1 791 642 .;locus=RLOC_00017013
Chr2	stalkie_big_nohaplotig	exon	44437442	44438277	100	-	.	Parent=comp130686_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	44437487	44437636	.	-	0	Parent=comp130686_c0_seq1.mrna1
Chr2	gffcl	locus	44438841	44440119	.	.	.	ID=RLOC_00017014;geneIDs=comp96643_c0_seq1.path1,comp145290_c0_seq1.path1;transcripts=comp145290_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44438841	44439549	.	+	.	ID=comp145290_c0_seq1.mrna1;geneID=comp145290_c0_seq1.path1;Name=comp145290_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=649;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017014
Chr2	stalkie_big_nohaplotig	exon	44438841	44439196	100	+	.	Parent=comp145290_c0_seq1.mrna1;Target=comp145290_c0_seq1 1 356 +
Chr2	stalkie_big_nohaplotig	exon	44439257	44439549	100	+	.	Parent=comp145290_c0_seq1.mrna1;Target=comp145290_c0_seq1 357 649 +
Chr2	stalkie_big_nohaplotig	CDS	44439008	44439196	.	+	0	Parent=comp145290_c0_seq1.mrna1;Target=comp145290_c0_seq1 168 356 +
Chr2	stalkie_big_nohaplotig	CDS	44439257	44439376	.	+	0	Parent=comp145290_c0_seq1.mrna1;Target=comp145290_c0_seq1 357 476 +
Chr2	gffcl	locus	44444347	44446045	.	+	.	ID=RLOC_00017015;geneIDs=FBgn0034352.1.path1;transcripts=FBgn0034352.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44444347	44446045	.	+	.	ID=FBgn0034352.1.mrna1;geneID=FBgn0034352.1.path1;Name=FBgn0034352.1;Dir=sensecoverage=86.9;identity=98.6;matches=1617;mismatches=23;indels=0;unknowns=0;locus=RLOC_00017015
Chr2	stalkie_big_nohaplotig	exon	44444347	44445248	97	+	.	Parent=FBgn0034352.1.mrna1;Target=FBgn0034352.1 248 1149 +
Chr2	stalkie_big_nohaplotig	exon	44445308	44446045	100	+	.	Parent=FBgn0034352.1.mrna1;Target=FBgn0034352.1 1150 1887 +
Chr2	stalkie_big_nohaplotig	CDS	44444349	44445248	.	+	0	Parent=FBgn0034352.1.mrna1;Target=FBgn0034352.1 250 1149 +
Chr2	stalkie_big_nohaplotig	CDS	44445308	44446045	.	+	0	Parent=FBgn0034352.1.mrna1;Target=FBgn0034352.1 1150 1887 +
Chr2	gffcl	locus	44447998	44563366	.	-	.	ID=RLOC_00017016;geneIDs=FBgn0034351.1.path1;transcripts=FBgn0034351.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44447998	44563366	.	-	.	ID=FBgn0034351.1.mrna1;geneID=FBgn0034351.1.path1;Name=FBgn0034351.1;Dir=sensecoverage=99.7;identity=99.4;matches=1038;mismatches=6;indels=0;unknowns=0;locus=RLOC_00017016
Chr2	stalkie_big_nohaplotig	exon	44447998	44448408	100	-	.	Parent=FBgn0034351.1.mrna1;Target=FBgn0034351.1 637 1047 +
Chr2	stalkie_big_nohaplotig	exon	44448794	44448861	100	-	.	Parent=FBgn0034351.1.mrna1;Target=FBgn0034351.1 569 636 +
Chr2	stalkie_big_nohaplotig	exon	44562731	44563029	98	-	.	Parent=FBgn0034351.1.mrna1;Target=FBgn0034351.1 270 568 +
Chr2	stalkie_big_nohaplotig	exon	44563101	44563366	98	-	.	Parent=FBgn0034351.1.mrna1;Target=FBgn0034351.1 4 269 +
Chr2	stalkie_big_nohaplotig	CDS	44447998	44448408	.	-	0	Parent=FBgn0034351.1.mrna1;Target=FBgn0034351.1 637 1047 +
Chr2	stalkie_big_nohaplotig	CDS	44448794	44448861	.	-	2	Parent=FBgn0034351.1.mrna1;Target=FBgn0034351.1 569 636 +
Chr2	stalkie_big_nohaplotig	CDS	44562731	44563029	.	-	1	Parent=FBgn0034351.1.mrna1;Target=FBgn0034351.1 270 568 +
Chr2	stalkie_big_nohaplotig	CDS	44563101	44563366	.	-	0	Parent=FBgn0034351.1.mrna1;Target=FBgn0034351.1 4 269 +
Chr2	gffcl	locus	44527428	44528504	.	+	.	ID=RLOC_00017017;geneIDs=ORF1509.path1;transcripts=ORF1509.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44527428	44528504	.	+	.	ID=ORF1509.mrna1;geneID=ORF1509.path1;Name=ORF1509;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1074;mismatches=3;indels=0;unknowns=0;Target=ORF1509 1077 1 .;locus=RLOC_00017017
Chr2	stalkie_big_nohaplotig	exon	44527428	44528504	99	+	.	Parent=ORF1509.mrna1
Chr2	stalkie_big_nohaplotig	CDS	44527428	44528504	.	+	0	Parent=ORF1509.mrna1
Chr2	gffcl	locus	44557865	44559984	.	+	.	ID=RLOC_00017018;geneIDs=comp161397_c0_seq1.path1;transcripts=comp161397_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44557865	44559984	.	+	.	ID=comp161397_c0_seq1.mrna1;geneID=comp161397_c0_seq1.path1;Name=comp161397_c0_seq1;Dir=sensecoverage=100.0;identity=97.0;matches=1998;mismatches=61;indels=1;unknowns=0;locus=RLOC_00017018
Chr2	stalkie_big_nohaplotig	exon	44557865	44559102	96	+	.	Parent=comp161397_c0_seq1.mrna1;Target=comp161397_c0_seq1 1 1238 +
Chr2	stalkie_big_nohaplotig	exon	44559163	44559984	97	+	.	Parent=comp161397_c0_seq1.mrna1;Target=comp161397_c0_seq1 1239 2059 +
Chr2	stalkie_big_nohaplotig	CDS	44557966	44559102	.	+	0	Parent=comp161397_c0_seq1.mrna1;Target=comp161397_c0_seq1 102 1238 +
Chr2	stalkie_big_nohaplotig	CDS	44559163	44559903	.	+	0	Parent=comp161397_c0_seq1.mrna1;Target=comp161397_c0_seq1 1239 1979 +
Chr2	gffcl	locus	44564443	44566733	.	+	.	ID=RLOC_00017019;geneIDs=ORF2247.path1;transcripts=ORF2247.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44564443	44566733	.	+	.	ID=ORF2247.mrna1;geneID=ORF2247.path1;Name=ORF2247;Dir=sensecoverage=99.8;identity=95.9;matches=868;mismatches=17;indels=20;unknowns=0;locus=RLOC_00017019
Chr2	stalkie_big_nohaplotig	exon	44564443	44564662	96	+	.	Parent=ORF2247.mrna1;Target=ORF2247 1 220 +
Chr2	stalkie_big_nohaplotig	exon	44566053	44566733	95	+	.	Parent=ORF2247.mrna1;Target=ORF2247 221 889 +
Chr2	stalkie_big_nohaplotig	CDS	44564443	44564662	.	+	0	Parent=ORF2247.mrna1;Target=ORF2247 1 220 +
Chr2	stalkie_big_nohaplotig	CDS	44566053	44566732	.	+	2	Parent=ORF2247.mrna1;Target=ORF2247 221 888 +
Chr2	gffcl	locus	44569458	44577076	.	+	.	ID=RLOC_00017020;geneIDs=FBgn0261119.1.path1;transcripts=FBgn0261119.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44569458	44577076	.	+	.	ID=FBgn0261119.1.mrna1;geneID=FBgn0261119.1.path1;Name=FBgn0261119.1;Dir=sensecoverage=100.0;identity=99.3;matches=1525;mismatches=11;indels=0;unknowns=0;locus=RLOC_00017020
Chr2	stalkie_big_nohaplotig	exon	44569458	44569491	97	+	.	Parent=FBgn0261119.1.mrna1;Target=FBgn0261119.1 1 34 +
Chr2	stalkie_big_nohaplotig	exon	44569585	44570603	99	+	.	Parent=FBgn0261119.1.mrna1;Target=FBgn0261119.1 35 1053 +
Chr2	stalkie_big_nohaplotig	exon	44570674	44571014	98	+	.	Parent=FBgn0261119.1.mrna1;Target=FBgn0261119.1 1054 1394 +
Chr2	stalkie_big_nohaplotig	exon	44576935	44577076	98	+	.	Parent=FBgn0261119.1.mrna1;Target=FBgn0261119.1 1395 1536 +
Chr2	stalkie_big_nohaplotig	CDS	44569458	44569491	.	+	0	Parent=FBgn0261119.1.mrna1;Target=FBgn0261119.1 1 34 +
Chr2	stalkie_big_nohaplotig	CDS	44569585	44570603	.	+	2	Parent=FBgn0261119.1.mrna1;Target=FBgn0261119.1 35 1053 +
Chr2	stalkie_big_nohaplotig	CDS	44570674	44571014	.	+	0	Parent=FBgn0261119.1.mrna1;Target=FBgn0261119.1 1054 1394 +
Chr2	stalkie_big_nohaplotig	CDS	44576935	44577076	.	+	1	Parent=FBgn0261119.1.mrna1;Target=FBgn0261119.1 1395 1536 +
Chr2	gffcl	locus	44571158	44575198	.	-	.	ID=RLOC_00017021;geneIDs=FBgn0050120.1.path1,comp150972_c0_seq1.path1;transcripts=FBgn0050120.1.mrna1,comp150972_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44571158	44575198	.	-	.	ID=FBgn0050120.1.mrna1;geneID=FBgn0050120.1.path1;Name=FBgn0050120.1;Dir=sensecoverage=99.8;identity=99.2;matches=1425;mismatches=12;indels=0;unknowns=0;locus=RLOC_00017021
Chr2	stalkie_big_nohaplotig	exon	44571158	44571334	99	-	.	Parent=FBgn0050120.1.mrna1;Target=FBgn0050120.1 1264 1440 +
Chr2	stalkie_big_nohaplotig	exon	44571590	44571791	98	-	.	Parent=FBgn0050120.1.mrna1;Target=FBgn0050120.1 1062 1263 +
Chr2	stalkie_big_nohaplotig	exon	44571844	44571977	99	-	.	Parent=FBgn0050120.1.mrna1;Target=FBgn0050120.1 928 1061 +
Chr2	stalkie_big_nohaplotig	exon	44572050	44572148	98	-	.	Parent=FBgn0050120.1.mrna1;Target=FBgn0050120.1 829 927 +
Chr2	stalkie_big_nohaplotig	exon	44572211	44572438	98	-	.	Parent=FBgn0050120.1.mrna1;Target=FBgn0050120.1 601 828 +
Chr2	stalkie_big_nohaplotig	exon	44572500	44572697	99	-	.	Parent=FBgn0050120.1.mrna1;Target=FBgn0050120.1 403 600 +
Chr2	stalkie_big_nohaplotig	exon	44572767	44572899	99	-	.	Parent=FBgn0050120.1.mrna1;Target=FBgn0050120.1 270 402 +
Chr2	stalkie_big_nohaplotig	exon	44574818	44574927	100	-	.	Parent=FBgn0050120.1.mrna1;Target=FBgn0050120.1 160 269 +
Chr2	stalkie_big_nohaplotig	exon	44574988	44575064	100	-	.	Parent=FBgn0050120.1.mrna1;Target=FBgn0050120.1 83 159 +
Chr2	stalkie_big_nohaplotig	exon	44575120	44575198	98	-	.	Parent=FBgn0050120.1.mrna1;Target=FBgn0050120.1 4 82 +
Chr2	stalkie_big_nohaplotig	CDS	44571158	44571334	.	-	0	Parent=FBgn0050120.1.mrna1;Target=FBgn0050120.1 1264 1440 +
Chr2	stalkie_big_nohaplotig	CDS	44571590	44571791	.	-	1	Parent=FBgn0050120.1.mrna1;Target=FBgn0050120.1 1062 1263 +
Chr2	stalkie_big_nohaplotig	CDS	44571844	44571977	.	-	0	Parent=FBgn0050120.1.mrna1;Target=FBgn0050120.1 928 1061 +
Chr2	stalkie_big_nohaplotig	CDS	44572050	44572148	.	-	0	Parent=FBgn0050120.1.mrna1;Target=FBgn0050120.1 829 927 +
Chr2	stalkie_big_nohaplotig	CDS	44572211	44572438	.	-	0	Parent=FBgn0050120.1.mrna1;Target=FBgn0050120.1 601 828 +
Chr2	stalkie_big_nohaplotig	CDS	44572500	44572697	.	-	0	Parent=FBgn0050120.1.mrna1;Target=FBgn0050120.1 403 600 +
Chr2	stalkie_big_nohaplotig	CDS	44572767	44572899	.	-	1	Parent=FBgn0050120.1.mrna1;Target=FBgn0050120.1 270 402 +
Chr2	stalkie_big_nohaplotig	CDS	44574818	44574927	.	-	0	Parent=FBgn0050120.1.mrna1;Target=FBgn0050120.1 160 269 +
Chr2	stalkie_big_nohaplotig	CDS	44574988	44575064	.	-	2	Parent=FBgn0050120.1.mrna1;Target=FBgn0050120.1 83 159 +
Chr2	stalkie_big_nohaplotig	CDS	44575120	44575198	.	-	0	Parent=FBgn0050120.1.mrna1;Target=FBgn0050120.1 4 82 +
Chr2	stalkie_big_nohaplotig	mRNA	44573056	44574841	.	-	.	ID=comp150972_c0_seq1.mrna1;geneID=comp150972_c0_seq1.path1;Name=comp150972_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.2;matches=1754;mismatches=29;indels=4;unknowns=0;Target=comp150972_c0_seq1 1784 1 .;CDS_Target=comp150972_c0_seq1 1233 1075 .;locus=RLOC_00017021
Chr2	stalkie_big_nohaplotig	exon	44573056	44574841	98	-	.	Parent=comp150972_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	44573607	44573765	.	-	0	Parent=comp150972_c0_seq1.mrna1
Chr2	gffcl	locus	44577566	44578080	.	-	.	ID=RLOC_00017022;geneIDs=FBgn0034350.1.path1;transcripts=FBgn0034350.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44577566	44578080	.	-	.	ID=FBgn0034350.1.mrna1;geneID=FBgn0034350.1.path1;Name=FBgn0034350.1;Dir=sensecoverage=100.0;identity=100.0;matches=384;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017022
Chr2	stalkie_big_nohaplotig	exon	44577566	44577688	100	-	.	Parent=FBgn0034350.1.mrna1;Target=FBgn0034350.1 262 384 +
Chr2	stalkie_big_nohaplotig	exon	44577756	44577942	100	-	.	Parent=FBgn0034350.1.mrna1;Target=FBgn0034350.1 75 261 +
Chr2	stalkie_big_nohaplotig	exon	44578007	44578080	100	-	.	Parent=FBgn0034350.1.mrna1;Target=FBgn0034350.1 1 74 +
Chr2	stalkie_big_nohaplotig	CDS	44577566	44577688	.	-	0	Parent=FBgn0034350.1.mrna1;Target=FBgn0034350.1 262 384 +
Chr2	stalkie_big_nohaplotig	CDS	44577756	44577942	.	-	1	Parent=FBgn0034350.1.mrna1;Target=FBgn0034350.1 75 261 +
Chr2	stalkie_big_nohaplotig	CDS	44578007	44578080	.	-	0	Parent=FBgn0034350.1.mrna1;Target=FBgn0034350.1 1 74 +
Chr2	gffcl	locus	44583583	44594310	.	-	.	ID=RLOC_00017023;geneIDs=FBgn0261477.1.path1;transcripts=FBgn0261477.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44583583	44594310	.	-	.	ID=FBgn0261477.1.mrna1;geneID=FBgn0261477.1.path1;Name=FBgn0261477.1;Dir=sensecoverage=100.0;identity=99.5;matches=1714;mismatches=8;indels=1;unknowns=0;Target=FBgn0261477.1 2 52 +;locus=RLOC_00017023
Chr2	stalkie_big_nohaplotig	exon	44583583	44584011	98	-	.	Parent=FBgn0261477.1.mrna1;Target=FBgn0261477.1 1294 1722 +
Chr2	stalkie_big_nohaplotig	exon	44584332	44584880	100	-	.	Parent=FBgn0261477.1.mrna1;Target=FBgn0261477.1 745 1293 +
Chr2	stalkie_big_nohaplotig	exon	44590615	44590961	99	-	.	Parent=FBgn0261477.1.mrna1;Target=FBgn0261477.1 398 744 +
Chr2	stalkie_big_nohaplotig	exon	44593913	44594310	99	-	.	Parent=FBgn0261477.1.mrna1;Target=FBgn0261477.1 1 397 +
Chr2	stalkie_big_nohaplotig	CDS	44594258	44594309	.	-	0	Parent=FBgn0261477.1.mrna1
Chr2	gffcl	locus	44591469	44592164	.	+	.	ID=RLOC_00017024;geneIDs=comp149736_c1_seq1.path1;transcripts=comp149736_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44591469	44592164	.	+	.	ID=comp149736_c1_seq1.mrna1;geneID=comp149736_c1_seq1.path1;Name=comp149736_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=694;mismatches=2;indels=0;unknowns=0;Target=comp149736_c1_seq1 696 1 .;CDS_Target=comp149736_c1_seq1 134 3 .;locus=RLOC_00017024
Chr2	stalkie_big_nohaplotig	exon	44591469	44592164	99	+	.	Parent=comp149736_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	44591471	44591602	.	+	0	Parent=comp149736_c1_seq1.mrna1
Chr2	gffcl	locus	44594691	44595135	.	-	.	ID=RLOC_00017025;geneIDs=comp141139_c1_seq1.path1;transcripts=comp141139_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44594691	44595135	.	-	.	ID=comp141139_c1_seq1.mrna1;geneID=comp141139_c1_seq1.path1;Name=comp141139_c1_seq1;Dir=indeterminatecoverage=96.5;identity=98.4;matches=438;mismatches=7;indels=0;unknowns=0;Target=comp141139_c1_seq1 446 2 .;CDS_Target=comp141139_c1_seq1 116 102 .;locus=RLOC_00017025
Chr2	stalkie_big_nohaplotig	exon	44594691	44595135	98	-	.	Parent=comp141139_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	44595021	44595035	.	-	0	Parent=comp141139_c1_seq1.mrna1
Chr2	gffcl	locus	44633966	44637037	.	-	.	ID=RLOC_00017026;geneIDs=Dv_FBgn0201266.8.path1,comp162154_c0_seq1.path1;transcripts=comp162154_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44633966	44637037	.	-	.	ID=comp162154_c0_seq1.mrna1;geneID=comp162154_c0_seq1.path1;Name=comp162154_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1944;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017026
Chr2	stalkie_big_nohaplotig	exon	44633966	44634068	100	-	.	Parent=comp162154_c0_seq1.mrna1;Target=comp162154_c0_seq1 1944 1842 .
Chr2	stalkie_big_nohaplotig	exon	44634174	44634385	100	-	.	Parent=comp162154_c0_seq1.mrna1;Target=comp162154_c0_seq1 1841 1630 .
Chr2	stalkie_big_nohaplotig	exon	44634447	44634579	100	-	.	Parent=comp162154_c0_seq1.mrna1;Target=comp162154_c0_seq1 1629 1497 .
Chr2	stalkie_big_nohaplotig	exon	44634639	44634747	100	-	.	Parent=comp162154_c0_seq1.mrna1;Target=comp162154_c0_seq1 1496 1388 .
Chr2	stalkie_big_nohaplotig	exon	44635467	44636008	100	-	.	Parent=comp162154_c0_seq1.mrna1;Target=comp162154_c0_seq1 1387 846 .
Chr2	stalkie_big_nohaplotig	exon	44636073	44636175	100	-	.	Parent=comp162154_c0_seq1.mrna1;Target=comp162154_c0_seq1 845 743 .
Chr2	stalkie_big_nohaplotig	exon	44636241	44636637	100	-	.	Parent=comp162154_c0_seq1.mrna1;Target=comp162154_c0_seq1 742 346 .
Chr2	stalkie_big_nohaplotig	exon	44636693	44637037	100	-	.	Parent=comp162154_c0_seq1.mrna1;Target=comp162154_c0_seq1 345 1 .
Chr2	stalkie_big_nohaplotig	CDS	44634495	44634579	.	-	1	Parent=comp162154_c0_seq1.mrna1;Target=comp162154_c0_seq1 1581 1497 .
Chr2	stalkie_big_nohaplotig	CDS	44634639	44634747	.	-	2	Parent=comp162154_c0_seq1.mrna1;Target=comp162154_c0_seq1 1496 1388 .
Chr2	stalkie_big_nohaplotig	CDS	44635467	44636008	.	-	1	Parent=comp162154_c0_seq1.mrna1;Target=comp162154_c0_seq1 1387 846 .
Chr2	stalkie_big_nohaplotig	CDS	44636073	44636175	.	-	2	Parent=comp162154_c0_seq1.mrna1;Target=comp162154_c0_seq1 845 743 .
Chr2	stalkie_big_nohaplotig	CDS	44636241	44636637	.	-	0	Parent=comp162154_c0_seq1.mrna1;Target=comp162154_c0_seq1 742 346 .
Chr2	stalkie_big_nohaplotig	CDS	44636693	44636902	.	-	0	Parent=comp162154_c0_seq1.mrna1;Target=comp162154_c0_seq1 345 136 .
Chr2	gffcl	locus	44638580	44646461	.	+	.	ID=RLOC_00017027;geneIDs=FBgn0034346.1.path1,comp162178_c1_seq1.path1;transcripts=comp162178_c1_seq1.mrna1,FBgn0034346.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44638580	44646461	.	+	.	ID=comp162178_c1_seq1.mrna1;geneID=comp162178_c1_seq1.path1;Name=comp162178_c1_seq1;Dir=antisensecoverage=99.9;identity=98.5;matches=5942;mismatches=41;indels=47;unknowns=0;locus=RLOC_00017027
Chr2	stalkie_big_nohaplotig	exon	44638580	44639218	98	+	.	Parent=comp162178_c1_seq1.mrna1;Target=comp162178_c1_seq1 5400 6038 -
Chr2	stalkie_big_nohaplotig	exon	44639279	44639922	100	+	.	Parent=comp162178_c1_seq1.mrna1;Target=comp162178_c1_seq1 4756 5399 -
Chr2	stalkie_big_nohaplotig	exon	44639980	44640163	100	+	.	Parent=comp162178_c1_seq1.mrna1;Target=comp162178_c1_seq1 4572 4755 -
Chr2	stalkie_big_nohaplotig	exon	44641616	44643221	100	+	.	Parent=comp162178_c1_seq1.mrna1;Target=comp162178_c1_seq1 2966 4571 -
Chr2	stalkie_big_nohaplotig	exon	44643292	44643776	99	+	.	Parent=comp162178_c1_seq1.mrna1;Target=comp162178_c1_seq1 2481 2965 -
Chr2	stalkie_big_nohaplotig	exon	44643840	44645000	99	+	.	Parent=comp162178_c1_seq1.mrna1;Target=comp162178_c1_seq1 1320 2480 -
Chr2	stalkie_big_nohaplotig	exon	44645198	44646461	94	+	.	Parent=comp162178_c1_seq1.mrna1;Target=comp162178_c1_seq1 9 1319 -
Chr2	stalkie_big_nohaplotig	CDS	44639066	44639218	.	+	0	Parent=comp162178_c1_seq1.mrna1;Target=comp162178_c1_seq1 5400 5552 .
Chr2	stalkie_big_nohaplotig	CDS	44639279	44639922	.	+	0	Parent=comp162178_c1_seq1.mrna1;Target=comp162178_c1_seq1 4756 5399 .
Chr2	stalkie_big_nohaplotig	CDS	44639980	44640163	.	+	1	Parent=comp162178_c1_seq1.mrna1;Target=comp162178_c1_seq1 4572 4755 .
Chr2	stalkie_big_nohaplotig	CDS	44641616	44643221	.	+	0	Parent=comp162178_c1_seq1.mrna1;Target=comp162178_c1_seq1 2966 4571 .
Chr2	stalkie_big_nohaplotig	CDS	44643292	44643776	.	+	2	Parent=comp162178_c1_seq1.mrna1;Target=comp162178_c1_seq1 2481 2965 .
Chr2	stalkie_big_nohaplotig	CDS	44643840	44644034	.	+	0	Parent=comp162178_c1_seq1.mrna1;Target=comp162178_c1_seq1 2286 2480 .
Chr2	stalkie_big_nohaplotig	mRNA	44639060	44644031	.	+	.	ID=FBgn0034346.1.mrna1;geneID=FBgn0034346.1.path1;Name=FBgn0034346.1;Dir=sensecoverage=100.0;identity=99.8;matches=3269;mismatches=1;indels=6;unknowns=0;locus=RLOC_00017027
Chr2	stalkie_big_nohaplotig	exon	44639060	44639218	100	+	.	Parent=FBgn0034346.1.mrna1;Target=FBgn0034346.1 1 159 +
Chr2	stalkie_big_nohaplotig	exon	44639279	44639922	100	+	.	Parent=FBgn0034346.1.mrna1;Target=FBgn0034346.1 160 803 +
Chr2	stalkie_big_nohaplotig	exon	44639980	44640163	100	+	.	Parent=FBgn0034346.1.mrna1;Target=FBgn0034346.1 804 987 +
Chr2	stalkie_big_nohaplotig	exon	44641616	44643221	100	+	.	Parent=FBgn0034346.1.mrna1;Target=FBgn0034346.1 988 2593 +
Chr2	stalkie_big_nohaplotig	exon	44643292	44643782	98	+	.	Parent=FBgn0034346.1.mrna1;Target=FBgn0034346.1 2594 3078 +
Chr2	stalkie_big_nohaplotig	exon	44643840	44644031	100	+	.	Parent=FBgn0034346.1.mrna1;Target=FBgn0034346.1 3079 3270 +
Chr2	stalkie_big_nohaplotig	CDS	44639060	44639218	.	+	0	Parent=FBgn0034346.1.mrna1;Target=FBgn0034346.1 1 159 +
Chr2	stalkie_big_nohaplotig	CDS	44639279	44639922	.	+	0	Parent=FBgn0034346.1.mrna1;Target=FBgn0034346.1 160 803 +
Chr2	stalkie_big_nohaplotig	CDS	44639980	44640163	.	+	1	Parent=FBgn0034346.1.mrna1;Target=FBgn0034346.1 804 987 +
Chr2	stalkie_big_nohaplotig	CDS	44641616	44643221	.	+	0	Parent=FBgn0034346.1.mrna1;Target=FBgn0034346.1 988 2593 +
Chr2	stalkie_big_nohaplotig	CDS	44643292	44643782	.	+	2	Parent=FBgn0034346.1.mrna1;Target=FBgn0034346.1 2594 3078 +
Chr2	stalkie_big_nohaplotig	CDS	44643840	44644031	.	+	0	Parent=FBgn0034346.1.mrna1;Target=FBgn0034346.1 3079 3270 +
Chr2	gffcl	locus	44648585	44723448	.	-	.	ID=RLOC_00017028;geneIDs=FBgn0050118.1.path1;transcripts=FBgn0050118.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44648585	44723448	.	-	.	ID=FBgn0050118.1.mrna1;geneID=FBgn0050118.1.path1;Name=FBgn0050118.1;Dir=sensecoverage=100.0;identity=99.9;matches=1636;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017028
Chr2	stalkie_big_nohaplotig	exon	44648585	44648625	100	-	.	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 1598 1638 +
Chr2	stalkie_big_nohaplotig	exon	44648785	44648865	100	-	.	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 1517 1597 +
Chr2	stalkie_big_nohaplotig	exon	44650715	44650896	100	-	.	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 1335 1516 +
Chr2	stalkie_big_nohaplotig	exon	44650958	44651288	100	-	.	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 1004 1334 +
Chr2	stalkie_big_nohaplotig	exon	44651347	44651560	100	-	.	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 790 1003 +
Chr2	stalkie_big_nohaplotig	exon	44653823	44653959	100	-	.	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 653 789 +
Chr2	stalkie_big_nohaplotig	exon	44654030	44654158	100	-	.	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 524 652 +
Chr2	stalkie_big_nohaplotig	exon	44694982	44695113	100	-	.	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 392 523 +
Chr2	stalkie_big_nohaplotig	exon	44704108	44704145	100	-	.	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 354 391 +
Chr2	stalkie_big_nohaplotig	exon	44704538	44704575	100	-	.	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 316 353 +
Chr2	stalkie_big_nohaplotig	exon	44706810	44706877	100	-	.	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 248 315 +
Chr2	stalkie_big_nohaplotig	exon	44723202	44723448	99	-	.	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 1 247 +
Chr2	stalkie_big_nohaplotig	CDS	44648585	44648625	.	-	2	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 1598 1638 +
Chr2	stalkie_big_nohaplotig	CDS	44648785	44648865	.	-	2	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 1517 1597 +
Chr2	stalkie_big_nohaplotig	CDS	44650715	44650896	.	-	1	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 1335 1516 +
Chr2	stalkie_big_nohaplotig	CDS	44650958	44651288	.	-	2	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 1004 1334 +
Chr2	stalkie_big_nohaplotig	CDS	44651347	44651560	.	-	0	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 790 1003 +
Chr2	stalkie_big_nohaplotig	CDS	44653823	44653959	.	-	2	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 653 789 +
Chr2	stalkie_big_nohaplotig	CDS	44654030	44654158	.	-	2	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 524 652 +
Chr2	stalkie_big_nohaplotig	CDS	44694982	44695113	.	-	2	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 392 523 +
Chr2	stalkie_big_nohaplotig	CDS	44704108	44704145	.	-	1	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 354 391 +
Chr2	stalkie_big_nohaplotig	CDS	44704538	44704575	.	-	0	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 316 353 +
Chr2	stalkie_big_nohaplotig	CDS	44706810	44706877	.	-	2	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 248 315 +
Chr2	stalkie_big_nohaplotig	CDS	44723202	44723448	.	-	0	Parent=FBgn0050118.1.mrna1;Target=FBgn0050118.1 1 247 +
Chr2	gffcl	locus	44661270	44662516	.	-	.	ID=RLOC_00017029;geneIDs=FBgn0003887.1.path1;transcripts=FBgn0003887.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44661270	44662516	.	-	.	ID=FBgn0003887.1.mrna1;geneID=FBgn0003887.1.path1;Name=FBgn0003887.1;Dir=indeterminatecoverage=92.6;identity=99.8;matches=1245;mismatches=2;indels=0;unknowns=0;Target=FBgn0003887.1 1247 1 .;CDS_Target=FBgn0003887.1 1245 1 .;locus=RLOC_00017029
Chr2	stalkie_big_nohaplotig	exon	44661270	44662516	99	-	.	Parent=FBgn0003887.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	44661272	44662516	.	-	0	Parent=FBgn0003887.1.mrna1
Chr2	gffcl	locus	44669214	44671573	.	-	.	ID=RLOC_00017030;geneIDs=comp162607_c0_seq1.path1;transcripts=comp162607_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44669214	44671573	.	-	.	ID=comp162607_c0_seq1.mrna1;geneID=comp162607_c0_seq1.path1;Name=comp162607_c0_seq1;Dir=antisensecoverage=99.5;identity=95.8;matches=2030;mismatches=37;indels=52;unknowns=0;Target=comp162607_c0_seq1 1187 1348 .;locus=RLOC_00017030
Chr2	stalkie_big_nohaplotig	exon	44669214	44669786	98	-	.	Parent=comp162607_c0_seq1.mrna1;Target=comp162607_c0_seq1 12 587 -
Chr2	stalkie_big_nohaplotig	exon	44669843	44670333	99	-	.	Parent=comp162607_c0_seq1.mrna1;Target=comp162607_c0_seq1 588 1078 -
Chr2	stalkie_big_nohaplotig	exon	44670387	44670816	89	-	.	Parent=comp162607_c0_seq1.mrna1;Target=comp162607_c0_seq1 1079 1528 -
Chr2	stalkie_big_nohaplotig	exon	44670902	44671348	94	-	.	Parent=comp162607_c0_seq1.mrna1;Target=comp162607_c0_seq1 1529 1993 -
Chr2	stalkie_big_nohaplotig	exon	44671443	44671573	96	-	.	Parent=comp162607_c0_seq1.mrna1;Target=comp162607_c0_seq1 1994 2125 -
Chr2	stalkie_big_nohaplotig	CDS	44670495	44670656	.	-	0	Parent=comp162607_c0_seq1.mrna1
Chr2	gffcl	locus	44700099	44700630	.	+	.	ID=RLOC_00017031;geneIDs=comp149056_c0_seq1.path1;transcripts=comp149056_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44700099	44700630	.	+	.	ID=comp149056_c0_seq1.mrna1;geneID=comp149056_c0_seq1.path1;Name=comp149056_c0_seq1;Dir=indeterminatecoverage=100.0;identity=85.0;matches=497;mismatches=26;indels=62;unknowns=0;Target=comp149056_c0_seq1 576 1 .;CDS_Target=comp149056_c0_seq1 112 2 .;locus=RLOC_00017031
Chr2	stalkie_big_nohaplotig	exon	44700099	44700630	84	+	.	Parent=comp149056_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	44700100	44700212	.	+	0	Parent=comp149056_c0_seq1.mrna1
Chr2	gffcl	locus	44741258	45004212	.	.	.	ID=RLOC_00017032;geneIDs=FBgn0033049.1.path1,FBgn0263109.1.path1;transcripts=FBgn0033049.1.mrna1,FBgn0263109.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44741258	45004212	.	+	.	ID=FBgn0033049.1.mrna1;geneID=FBgn0033049.1.path1;Name=FBgn0033049.1;Dir=indeterminatecoverage=87.7;identity=97.9;matches=2119;mismatches=17;indels=28;unknowns=0;locus=RLOC_00017032
Chr2	stalkie_big_nohaplotig	exon	44741258	44743308	99	+	.	Parent=FBgn0033049.1.mrna1;Target=FBgn0033049.1 2058 8 .
Chr2	stalkie_big_nohaplotig	exon	44938752	44938757	100	+	.	Parent=FBgn0033049.1.mrna1;Target=FBgn0033049.1 2064 2059 .
Chr2	stalkie_big_nohaplotig	exon	44944490	44944492	100	+	.	Parent=FBgn0033049.1.mrna1;Target=FBgn0033049.1 2067 2065 .
Chr2	stalkie_big_nohaplotig	exon	44967296	44967316	57	+	.	Parent=FBgn0033049.1.mrna1;Target=FBgn0033049.1 2079 2068 .
Chr2	stalkie_big_nohaplotig	exon	44973093	44973094	100	+	.	Parent=FBgn0033049.1.mrna1;Target=FBgn0033049.1 2081 2080 .
Chr2	stalkie_big_nohaplotig	exon	44974975	44974982	100	+	.	Parent=FBgn0033049.1.mrna1;Target=FBgn0033049.1 2089 2082 .
Chr2	stalkie_big_nohaplotig	exon	44982911	44982916	100	+	.	Parent=FBgn0033049.1.mrna1;Target=FBgn0033049.1 2095 2090 .
Chr2	stalkie_big_nohaplotig	exon	44987572	44987579	100	+	.	Parent=FBgn0033049.1.mrna1;Target=FBgn0033049.1 2103 2096 .
Chr2	stalkie_big_nohaplotig	exon	45002999	45003031	44	+	.	Parent=FBgn0033049.1.mrna1;Target=FBgn0033049.1 2155 2104 .
Chr2	stalkie_big_nohaplotig	exon	45004206	45004212	85	+	.	Parent=FBgn0033049.1.mrna1;Target=FBgn0033049.1 2162 2156 .
Chr2	stalkie_big_nohaplotig	CDS	44741260	44743308	.	+	0	Parent=FBgn0033049.1.mrna1;Target=FBgn0033049.1 2058 10 .
Chr2	stalkie_big_nohaplotig	CDS	44938752	44938757	.	+	0	Parent=FBgn0033049.1.mrna1;Target=FBgn0033049.1 2064 2059 .
Chr2	stalkie_big_nohaplotig	CDS	44944490	44944492	.	+	0	Parent=FBgn0033049.1.mrna1;Target=FBgn0033049.1 2067 2065 .
Chr2	stalkie_big_nohaplotig	CDS	44967296	44967316	.	+	0	Parent=FBgn0033049.1.mrna1;Target=FBgn0033049.1 2079 2068 .
Chr2	stalkie_big_nohaplotig	CDS	44973093	44973094	.	+	0	Parent=FBgn0033049.1.mrna1;Target=FBgn0033049.1 2081 2080 .
Chr2	stalkie_big_nohaplotig	CDS	44974975	44974982	.	+	1	Parent=FBgn0033049.1.mrna1;Target=FBgn0033049.1 2089 2082 .
Chr2	stalkie_big_nohaplotig	CDS	44982911	44982916	.	+	2	Parent=FBgn0033049.1.mrna1;Target=FBgn0033049.1 2095 2090 .
Chr2	stalkie_big_nohaplotig	CDS	44987572	44987579	.	+	2	Parent=FBgn0033049.1.mrna1;Target=FBgn0033049.1 2103 2096 .
Chr2	stalkie_big_nohaplotig	CDS	45002999	45003031	.	+	0	Parent=FBgn0033049.1.mrna1;Target=FBgn0033049.1 2155 2104 .
Chr2	stalkie_big_nohaplotig	CDS	45004206	45004212	.	+	0	Parent=FBgn0033049.1.mrna1;Target=FBgn0033049.1 2162 2156 .
Chr2	stalkie_big_nohaplotig	mRNA	44974728	44979687	.	-	.	ID=FBgn0263109.1.mrna1;geneID=FBgn0263109.1.path1;Name=FBgn0263109.1;Dir=indeterminatecoverage=99.4;identity=99.5;matches=4933;mismatches=27;indels=0;unknowns=0;Target=FBgn0263109.1 4992 33 .;CDS_Target=FBgn0263109.1 4992 34 .;locus=RLOC_00017032
Chr2	stalkie_big_nohaplotig	exon	44974728	44979687	99	-	.	Parent=FBgn0263109.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	44974728	44979686	.	-	0	Parent=FBgn0263109.1.mrna1
Chr2	gffcl	locus	44741258	45153841	.	.	.	ID=RLOC_00017033;geneIDs=ORF893.path1,comp160850_c2_seq1.path1;transcripts=comp160850_c2_seq1.mrna1,ORF893.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44741258	45153841	.	-	.	ID=comp160850_c2_seq1.mrna1;geneID=comp160850_c2_seq1.path1;Name=comp160850_c2_seq1;Dir=indeterminatecoverage=95.7;identity=97.4;matches=2268;mismatches=26;indels=34;unknowns=0;Target=comp160850_c2_seq1 1582 1328 .;locus=RLOC_00017033
Chr2	stalkie_big_nohaplotig	exon	44741258	44743326	99	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 2450 382 .
Chr2	stalkie_big_nohaplotig	exon	44967302	44967304	100	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 381 379 .
Chr2	stalkie_big_nohaplotig	exon	44973093	44973098	100	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 378 373 .
Chr2	stalkie_big_nohaplotig	exon	44981887	44981891	100	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 372 368 .
Chr2	stalkie_big_nohaplotig	exon	44982912	44982918	100	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 367 361 .
Chr2	stalkie_big_nohaplotig	exon	44987574	44987580	100	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 360 354 .
Chr2	stalkie_big_nohaplotig	exon	45003000	45003029	42	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 353 305 .
Chr2	stalkie_big_nohaplotig	exon	45004204	45004211	75	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 304 297 .
Chr2	stalkie_big_nohaplotig	exon	45006514	45006516	100	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 296 294 .
Chr2	stalkie_big_nohaplotig	exon	45007753	45007761	100	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 293 285 .
Chr2	stalkie_big_nohaplotig	exon	45010857	45010860	100	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 284 281 .
Chr2	stalkie_big_nohaplotig	exon	45014489	45014490	100	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 280 279 .
Chr2	stalkie_big_nohaplotig	exon	45029909	45029920	100	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 278 267 .
Chr2	stalkie_big_nohaplotig	exon	45030385	45030395	90	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 266 256 .
Chr2	stalkie_big_nohaplotig	exon	45041154	45041188	61	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 255 225 .
Chr2	stalkie_big_nohaplotig	exon	45047747	45047751	100	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 224 220 .
Chr2	stalkie_big_nohaplotig	exon	45053758	45053760	100	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 219 217 .
Chr2	stalkie_big_nohaplotig	exon	45056852	45056857	100	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 216 211 .
Chr2	stalkie_big_nohaplotig	exon	45058469	45058474	100	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 210 205 .
Chr2	stalkie_big_nohaplotig	exon	45078998	45079000	100	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 204 202 .
Chr2	stalkie_big_nohaplotig	exon	45085535	45085545	100	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 201 191 .
Chr2	stalkie_big_nohaplotig	exon	45085562	45085568	100	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 150 144 .
Chr2	stalkie_big_nohaplotig	exon	45094916	45094934	52	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 143 134 .
Chr2	stalkie_big_nohaplotig	exon	45139303	45139304	100	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 133 132 .
Chr2	stalkie_big_nohaplotig	exon	45143003	45143017	100	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 131 117 .
Chr2	stalkie_big_nohaplotig	exon	45144847	45144854	100	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 116 109 .
Chr2	stalkie_big_nohaplotig	exon	45146863	45146866	100	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 108 105 .
Chr2	stalkie_big_nohaplotig	exon	45153834	45153841	100	-	.	Parent=comp160850_c2_seq1.mrna1;Target=comp160850_c2_seq1 104 97 .
Chr2	stalkie_big_nohaplotig	CDS	44742126	44742380	.	-	0	Parent=comp160850_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45138677	45140038	.	+	.	ID=ORF893.mrna1;geneID=ORF893.path1;Name=ORF893;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1362;mismatches=0;indels=0;unknowns=0;Target=ORF893 1362 1 .;locus=RLOC_00017033
Chr2	stalkie_big_nohaplotig	exon	45138677	45140038	100	+	.	Parent=ORF893.mrna1
Chr2	stalkie_big_nohaplotig	CDS	45138677	45140038	.	+	0	Parent=ORF893.mrna1
Chr2	gffcl	locus	44794554	44801860	.	+	.	ID=RLOC_00017034;geneIDs=FBgn0004603.1.path1;transcripts=FBgn0004603.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44794554	44801860	.	+	.	ID=FBgn0004603.1.mrna1;geneID=FBgn0004603.1.path1;Name=FBgn0004603.1;Dir=sensecoverage=73.4;identity=100.0;matches=1165;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017034
Chr2	stalkie_big_nohaplotig	exon	44794554	44794675	100	+	.	Parent=FBgn0004603.1.mrna1;Target=FBgn0004603.1 423 544 +
Chr2	stalkie_big_nohaplotig	exon	44796173	44796257	100	+	.	Parent=FBgn0004603.1.mrna1;Target=FBgn0004603.1 545 629 +
Chr2	stalkie_big_nohaplotig	exon	44796335	44796413	100	+	.	Parent=FBgn0004603.1.mrna1;Target=FBgn0004603.1 630 708 +
Chr2	stalkie_big_nohaplotig	exon	44799272	44799440	100	+	.	Parent=FBgn0004603.1.mrna1;Target=FBgn0004603.1 709 877 +
Chr2	stalkie_big_nohaplotig	exon	44799566	44799724	100	+	.	Parent=FBgn0004603.1.mrna1;Target=FBgn0004603.1 878 1036 +
Chr2	stalkie_big_nohaplotig	exon	44799862	44800039	100	+	.	Parent=FBgn0004603.1.mrna1;Target=FBgn0004603.1 1037 1214 +
Chr2	stalkie_big_nohaplotig	exon	44801396	44801562	100	+	.	Parent=FBgn0004603.1.mrna1;Target=FBgn0004603.1 1215 1381 +
Chr2	stalkie_big_nohaplotig	exon	44801655	44801860	100	+	.	Parent=FBgn0004603.1.mrna1;Target=FBgn0004603.1 1382 1587 +
Chr2	stalkie_big_nohaplotig	CDS	44794555	44794675	.	+	0	Parent=FBgn0004603.1.mrna1;Target=FBgn0004603.1 424 544 +
Chr2	stalkie_big_nohaplotig	CDS	44796173	44796257	.	+	2	Parent=FBgn0004603.1.mrna1;Target=FBgn0004603.1 545 629 +
Chr2	stalkie_big_nohaplotig	CDS	44796335	44796413	.	+	1	Parent=FBgn0004603.1.mrna1;Target=FBgn0004603.1 630 708 +
Chr2	stalkie_big_nohaplotig	CDS	44799272	44799440	.	+	0	Parent=FBgn0004603.1.mrna1;Target=FBgn0004603.1 709 877 +
Chr2	stalkie_big_nohaplotig	CDS	44799566	44799724	.	+	2	Parent=FBgn0004603.1.mrna1;Target=FBgn0004603.1 878 1036 +
Chr2	stalkie_big_nohaplotig	CDS	44799862	44800039	.	+	2	Parent=FBgn0004603.1.mrna1;Target=FBgn0004603.1 1037 1214 +
Chr2	stalkie_big_nohaplotig	CDS	44801396	44801562	.	+	1	Parent=FBgn0004603.1.mrna1;Target=FBgn0004603.1 1215 1381 +
Chr2	stalkie_big_nohaplotig	CDS	44801655	44801860	.	+	2	Parent=FBgn0004603.1.mrna1;Target=FBgn0004603.1 1382 1587 +
Chr2	gffcl	locus	44819595	44821418	.	-	.	ID=RLOC_00017035;geneIDs=ORF433.path1;transcripts=ORF433.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44819595	44821418	.	-	.	ID=ORF433.mrna1;geneID=ORF433.path1;Name=ORF433;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1823;mismatches=1;indels=0;unknowns=0;Target=ORF433 1824 1 .;locus=RLOC_00017035
Chr2	stalkie_big_nohaplotig	exon	44819595	44821418	99	-	.	Parent=ORF433.mrna1
Chr2	stalkie_big_nohaplotig	CDS	44819595	44821418	.	-	0	Parent=ORF433.mrna1
Chr2	gffcl	locus	44889704	44893625	.	-	.	ID=RLOC_00017037;geneIDs=FBgn0030403.1.path1;transcripts=FBgn0030403.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44889704	44893625	.	-	.	ID=FBgn0030403.1.mrna1;geneID=FBgn0030403.1.path1;Name=FBgn0030403.1;Dir=sensecoverage=100.0;identity=99.9;matches=2674;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017037
Chr2	stalkie_big_nohaplotig	exon	44889704	44890270	100	-	.	Parent=FBgn0030403.1.mrna1;Target=FBgn0030403.1 2110 2676 +
Chr2	stalkie_big_nohaplotig	exon	44890332	44890937	100	-	.	Parent=FBgn0030403.1.mrna1;Target=FBgn0030403.1 1504 2109 +
Chr2	stalkie_big_nohaplotig	exon	44891000	44891119	100	-	.	Parent=FBgn0030403.1.mrna1;Target=FBgn0030403.1 1384 1503 +
Chr2	stalkie_big_nohaplotig	exon	44891194	44891556	100	-	.	Parent=FBgn0030403.1.mrna1;Target=FBgn0030403.1 1021 1383 +
Chr2	stalkie_big_nohaplotig	exon	44891638	44892171	100	-	.	Parent=FBgn0030403.1.mrna1;Target=FBgn0030403.1 487 1020 +
Chr2	stalkie_big_nohaplotig	exon	44893061	44893427	99	-	.	Parent=FBgn0030403.1.mrna1;Target=FBgn0030403.1 120 486 +
Chr2	stalkie_big_nohaplotig	exon	44893507	44893625	99	-	.	Parent=FBgn0030403.1.mrna1;Target=FBgn0030403.1 1 119 +
Chr2	stalkie_big_nohaplotig	CDS	44889704	44890270	.	-	0	Parent=FBgn0030403.1.mrna1;Target=FBgn0030403.1 2110 2676 +
Chr2	stalkie_big_nohaplotig	CDS	44890332	44890937	.	-	0	Parent=FBgn0030403.1.mrna1;Target=FBgn0030403.1 1504 2109 +
Chr2	stalkie_big_nohaplotig	CDS	44891000	44891119	.	-	0	Parent=FBgn0030403.1.mrna1;Target=FBgn0030403.1 1384 1503 +
Chr2	stalkie_big_nohaplotig	CDS	44891194	44891556	.	-	0	Parent=FBgn0030403.1.mrna1;Target=FBgn0030403.1 1021 1383 +
Chr2	stalkie_big_nohaplotig	CDS	44891638	44892171	.	-	0	Parent=FBgn0030403.1.mrna1;Target=FBgn0030403.1 487 1020 +
Chr2	stalkie_big_nohaplotig	CDS	44893061	44893427	.	-	1	Parent=FBgn0030403.1.mrna1;Target=FBgn0030403.1 120 486 +
Chr2	stalkie_big_nohaplotig	CDS	44893507	44893625	.	-	0	Parent=FBgn0030403.1.mrna1;Target=FBgn0030403.1 1 119 +
Chr2	gffcl	locus	44893674	44894009	.	-	.	ID=RLOC_00017038;geneIDs=comp142865_c0_seq1.path1;transcripts=comp142865_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44893674	44894009	.	-	.	ID=comp142865_c0_seq1.mrna1;geneID=comp142865_c0_seq1.path1;Name=comp142865_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=336;mismatches=0;indels=0;unknowns=0;Target=comp142865_c0_seq1 336 1 .;CDS_Target=comp142865_c0_seq1 247 170 .;locus=RLOC_00017038
Chr2	stalkie_big_nohaplotig	exon	44893674	44894009	100	-	.	Parent=comp142865_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	44893763	44893840	.	-	0	Parent=comp142865_c0_seq1.mrna1
Chr2	gffcl	locus	44897132	44898299	.	+	.	ID=RLOC_00017039;geneIDs=Dp_FBgn0074876.path1;transcripts=Dp_FBgn0074876.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44897132	44898299	.	+	.	ID=Dp_FBgn0074876.mrna1;geneID=Dp_FBgn0074876.path1;Name=Dp_FBgn0074876;Dir=sensecoverage=87.3;identity=99.4;matches=661;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017039
Chr2	stalkie_big_nohaplotig	exon	44897132	44897190	98	+	.	Parent=Dp_FBgn0074876.mrna1;Target=Dp_FBgn0074876 61 119 +
Chr2	stalkie_big_nohaplotig	exon	44897270	44897624	99	+	.	Parent=Dp_FBgn0074876.mrna1;Target=Dp_FBgn0074876 120 474 +
Chr2	stalkie_big_nohaplotig	exon	44898049	44898299	100	+	.	Parent=Dp_FBgn0074876.mrna1;Target=Dp_FBgn0074876 475 725 +
Chr2	stalkie_big_nohaplotig	CDS	44897132	44897190	.	+	0	Parent=Dp_FBgn0074876.mrna1;Target=Dp_FBgn0074876 61 119 +
Chr2	stalkie_big_nohaplotig	CDS	44897270	44897624	.	+	1	Parent=Dp_FBgn0074876.mrna1;Target=Dp_FBgn0074876 120 474 +
Chr2	stalkie_big_nohaplotig	CDS	44898049	44898297	.	+	0	Parent=Dp_FBgn0074876.mrna1;Target=Dp_FBgn0074876 475 723 +
Chr2	gffcl	locus	44941442	44942626	.	-	.	ID=RLOC_00017040;geneIDs=ORF1208.path1;transcripts=ORF1208.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44941442	44942626	.	-	.	ID=ORF1208.mrna1;geneID=ORF1208.path1;Name=ORF1208;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1185;mismatches=0;indels=0;unknowns=0;Target=ORF1208 1185 1 .;locus=RLOC_00017040
Chr2	stalkie_big_nohaplotig	exon	44941442	44942626	100	-	.	Parent=ORF1208.mrna1
Chr2	stalkie_big_nohaplotig	CDS	44941442	44942626	.	-	0	Parent=ORF1208.mrna1
Chr2	gffcl	locus	44952456	44953129	.	-	.	ID=RLOC_00017041;geneIDs=comp148967_c0_seq1.path1;transcripts=comp148967_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44952456	44953129	.	-	.	ID=comp148967_c0_seq1.mrna1;geneID=comp148967_c0_seq1.path1;Name=comp148967_c0_seq1;Dir=antisensecoverage=51.3;identity=100.0;matches=421;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017041
Chr2	stalkie_big_nohaplotig	exon	44952456	44952627	100	-	.	Parent=comp148967_c0_seq1.mrna1;Target=comp148967_c0_seq1 400 571 -
Chr2	stalkie_big_nohaplotig	exon	44952725	44952848	100	-	.	Parent=comp148967_c0_seq1.mrna1;Target=comp148967_c0_seq1 572 695 -
Chr2	stalkie_big_nohaplotig	exon	44953005	44953129	100	-	.	Parent=comp148967_c0_seq1.mrna1;Target=comp148967_c0_seq1 696 820 -
Chr2	stalkie_big_nohaplotig	CDS	44952508	44952627	.	-	0	Parent=comp148967_c0_seq1.mrna1;Target=comp148967_c0_seq1 452 571 .
Chr2	stalkie_big_nohaplotig	CDS	44952725	44952848	.	-	1	Parent=comp148967_c0_seq1.mrna1;Target=comp148967_c0_seq1 572 695 .
Chr2	stalkie_big_nohaplotig	CDS	44953005	44953030	.	-	0	Parent=comp148967_c0_seq1.mrna1;Target=comp148967_c0_seq1 696 721 .
Chr2	gffcl	locus	44980082	44988118	.	-	.	ID=RLOC_00017042;geneIDs=comp138123_c1_seq1.path1;transcripts=comp138123_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	44980082	44988118	.	-	.	ID=comp138123_c1_seq1.mrna1;geneID=comp138123_c1_seq1.path1;Name=comp138123_c1_seq1;Dir=antisensecoverage=99.2;identity=99.6;matches=1134;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017042
Chr2	stalkie_big_nohaplotig	exon	44980082	44981151	99	-	.	Parent=comp138123_c1_seq1.mrna1;Target=comp138123_c1_seq1 3 1072 -
Chr2	stalkie_big_nohaplotig	exon	44988050	44988118	100	-	.	Parent=comp138123_c1_seq1.mrna1;Target=comp138123_c1_seq1 1073 1141 -
Chr2	stalkie_big_nohaplotig	CDS	44980083	44981151	.	-	1	Parent=comp138123_c1_seq1.mrna1;Target=comp138123_c1_seq1 4 1072 .
Chr2	stalkie_big_nohaplotig	CDS	44988050	44988117	.	-	0	Parent=comp138123_c1_seq1.mrna1;Target=comp138123_c1_seq1 1073 1140 .
Chr2	gffcl	locus	45054466	45307928	.	+	.	ID=RLOC_00017043;geneIDs=FBgn0085414.1.path1;transcripts=FBgn0085414.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45054466	45307928	.	+	.	ID=FBgn0085414.1.mrna1;geneID=FBgn0085414.1.path1;Name=FBgn0085414.1;Dir=sensecoverage=98.5;identity=96.6;matches=893;mismatches=4;indels=27;unknowns=0;locus=RLOC_00017043
Chr2	stalkie_big_nohaplotig	exon	45054466	45054646	100	+	.	Parent=FBgn0085414.1.mrna1;Target=FBgn0085414.1 1 181 +
Chr2	stalkie_big_nohaplotig	exon	45075160	45075284	100	+	.	Parent=FBgn0085414.1.mrna1;Target=FBgn0085414.1 182 306 +
Chr2	stalkie_big_nohaplotig	exon	45077144	45077222	98	+	.	Parent=FBgn0085414.1.mrna1;Target=FBgn0085414.1 307 385 +
Chr2	stalkie_big_nohaplotig	exon	45078173	45078176	100	+	.	Parent=FBgn0085414.1.mrna1;Target=FBgn0085414.1 386 389 +
Chr2	stalkie_big_nohaplotig	exon	45081159	45081161	100	+	.	Parent=FBgn0085414.1.mrna1;Target=FBgn0085414.1 390 392 +
Chr2	stalkie_big_nohaplotig	exon	45096314	45096324	100	+	.	Parent=FBgn0085414.1.mrna1;Target=FBgn0085414.1 393 403 +
Chr2	stalkie_big_nohaplotig	exon	45296182	45296184	100	+	.	Parent=FBgn0085414.1.mrna1;Target=FBgn0085414.1 500 502 +
Chr2	stalkie_big_nohaplotig	exon	45297978	45298028	41	+	.	Parent=FBgn0085414.1.mrna1;Target=FBgn0085414.1 503 526 +
Chr2	stalkie_big_nohaplotig	exon	45301816	45301954	100	+	.	Parent=FBgn0085414.1.mrna1;Target=FBgn0085414.1 561 699 +
Chr2	stalkie_big_nohaplotig	exon	45307155	45307368	100	+	.	Parent=FBgn0085414.1.mrna1;Target=FBgn0085414.1 700 913 +
Chr2	stalkie_big_nohaplotig	exon	45307817	45307928	100	+	.	Parent=FBgn0085414.1.mrna1;Target=FBgn0085414.1 914 1025 +
Chr2	stalkie_big_nohaplotig	CDS	45054466	45054646	.	+	0	Parent=FBgn0085414.1.mrna1;Target=FBgn0085414.1 1 181 +
Chr2	stalkie_big_nohaplotig	CDS	45075160	45075284	.	+	2	Parent=FBgn0085414.1.mrna1;Target=FBgn0085414.1 182 306 +
Chr2	stalkie_big_nohaplotig	CDS	45077144	45077222	.	+	0	Parent=FBgn0085414.1.mrna1;Target=FBgn0085414.1 307 385 +
Chr2	stalkie_big_nohaplotig	CDS	45078173	45078176	.	+	2	Parent=FBgn0085414.1.mrna1;Target=FBgn0085414.1 386 389 +
Chr2	stalkie_big_nohaplotig	CDS	45081159	45081161	.	+	1	Parent=FBgn0085414.1.mrna1;Target=FBgn0085414.1 390 392 +
Chr2	stalkie_big_nohaplotig	CDS	45096314	45096324	.	+	1	Parent=FBgn0085414.1.mrna1;Target=FBgn0085414.1 393 403 +
Chr2	stalkie_big_nohaplotig	CDS	45296182	45296184	.	+	2	Parent=FBgn0085414.1.mrna1;Target=FBgn0085414.1 500 502 +
Chr2	stalkie_big_nohaplotig	CDS	45297978	45298028	.	+	2	Parent=FBgn0085414.1.mrna1;Target=FBgn0085414.1 503 526 +
Chr2	stalkie_big_nohaplotig	CDS	45301816	45301954	.	+	2	Parent=FBgn0085414.1.mrna1;Target=FBgn0085414.1 561 699 +
Chr2	stalkie_big_nohaplotig	CDS	45307155	45307368	.	+	1	Parent=FBgn0085414.1.mrna1;Target=FBgn0085414.1 700 913 +
Chr2	stalkie_big_nohaplotig	CDS	45307817	45307926	.	+	0	Parent=FBgn0085414.1.mrna1;Target=FBgn0085414.1 914 1023 +
Chr2	gffcl	locus	45085129	45086296	.	+	.	ID=RLOC_00017044;geneIDs=Dp_FBgn0074876.path2;transcripts=Dp_FBgn0074876.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	45085129	45086296	.	+	.	ID=Dp_FBgn0074876.mrna2;geneID=Dp_FBgn0074876.path2;Name=Dp_FBgn0074876;Dir=sensecoverage=87.3;identity=99.2;matches=660;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017044
Chr2	stalkie_big_nohaplotig	exon	45085129	45085187	100	+	.	Parent=Dp_FBgn0074876.mrna2;Target=Dp_FBgn0074876 61 119 +
Chr2	stalkie_big_nohaplotig	exon	45085267	45085621	98	+	.	Parent=Dp_FBgn0074876.mrna2;Target=Dp_FBgn0074876 120 474 +
Chr2	stalkie_big_nohaplotig	exon	45086046	45086296	100	+	.	Parent=Dp_FBgn0074876.mrna2;Target=Dp_FBgn0074876 475 725 +
Chr2	stalkie_big_nohaplotig	CDS	45085129	45085187	.	+	0	Parent=Dp_FBgn0074876.mrna2;Target=Dp_FBgn0074876 61 119 +
Chr2	stalkie_big_nohaplotig	CDS	45085267	45085621	.	+	1	Parent=Dp_FBgn0074876.mrna2;Target=Dp_FBgn0074876 120 474 +
Chr2	stalkie_big_nohaplotig	CDS	45086046	45086294	.	+	0	Parent=Dp_FBgn0074876.mrna2;Target=Dp_FBgn0074876 475 723 +
Chr2	gffcl	locus	45089583	45090326	.	-	.	ID=RLOC_00017045;geneIDs=comp143384_c0_seq1.path2;transcripts=comp143384_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	45089583	45090326	.	-	.	ID=comp143384_c0_seq1.mrna2;geneID=comp143384_c0_seq1.path2;Name=comp143384_c0_seq1;Dir=sensecoverage=96.8;identity=99.8;matches=574;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017045
Chr2	stalkie_big_nohaplotig	exon	45089583	45089924	100	-	.	Parent=comp143384_c0_seq1.mrna2;Target=comp143384_c0_seq1 247 588 +
Chr2	stalkie_big_nohaplotig	exon	45090037	45090157	100	-	.	Parent=comp143384_c0_seq1.mrna2;Target=comp143384_c0_seq1 126 246 +
Chr2	stalkie_big_nohaplotig	exon	45090215	45090326	99	-	.	Parent=comp143384_c0_seq1.mrna2;Target=comp143384_c0_seq1 14 125 +
Chr2	stalkie_big_nohaplotig	CDS	45089583	45089924	.	-	0	Parent=comp143384_c0_seq1.mrna2;Target=comp143384_c0_seq1 247 588 +
Chr2	stalkie_big_nohaplotig	CDS	45090037	45090157	.	-	1	Parent=comp143384_c0_seq1.mrna2;Target=comp143384_c0_seq1 126 246 +
Chr2	stalkie_big_nohaplotig	CDS	45090215	45090252	.	-	0	Parent=comp143384_c0_seq1.mrna2;Target=comp143384_c0_seq1 88 125 +
Chr2	gffcl	locus	45114781	45115395	.	+	.	ID=RLOC_00017046;geneIDs=comp75807_c0_seq1.path1;transcripts=comp75807_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45114781	45115395	.	+	.	ID=comp75807_c0_seq1.mrna1;geneID=comp75807_c0_seq1.path1;Name=comp75807_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=601;mismatches=6;indels=8;unknowns=0;Target=comp75807_c0_seq1 607 1 .;CDS_Target=comp75807_c0_seq1 90 1 .;locus=RLOC_00017046
Chr2	stalkie_big_nohaplotig	exon	45114781	45115395	97	+	.	Parent=comp75807_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	45114781	45114872	.	+	0	Parent=comp75807_c0_seq1.mrna1
Chr2	gffcl	locus	45309979	45311075	.	-	.	ID=RLOC_00017048;geneIDs=comp154867_c0_seq1.path1;transcripts=comp154867_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45309979	45311075	.	-	.	ID=comp154867_c0_seq1.mrna1;geneID=comp154867_c0_seq1.path1;Name=comp154867_c0_seq1;Dir=indeterminatecoverage=97.6;identity=93.4;matches=1067;mismatches=17;indels=58;unknowns=0;Target=comp154867_c0_seq1 1157 29 .;CDS_Target=comp154867_c0_seq1 124 29 .;locus=RLOC_00017048
Chr2	stalkie_big_nohaplotig	exon	45309979	45311075	93	-	.	Parent=comp154867_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	45310980	45311075	.	-	0	Parent=comp154867_c0_seq1.mrna1
Chr2	gffcl	locus	45311179	45311641	.	+	.	ID=RLOC_00017049;geneIDs=comp150404_c0_seq1.path1;transcripts=comp150404_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45311179	45311641	.	+	.	ID=comp150404_c0_seq1.mrna1;geneID=comp150404_c0_seq1.path1;Name=comp150404_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=462;mismatches=1;indels=0;unknowns=0;Target=comp150404_c0_seq1 463 1 .;CDS_Target=comp150404_c0_seq1 83 3 .;locus=RLOC_00017049
Chr2	stalkie_big_nohaplotig	exon	45311179	45311641	99	+	.	Parent=comp150404_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	45311181	45311261	.	+	0	Parent=comp150404_c0_seq1.mrna1
Chr2	gffcl	locus	45311997	45313955	.	+	.	ID=RLOC_00017050;geneIDs=comp143203_c0_seq1.path1;transcripts=comp143203_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45311997	45313955	.	+	.	ID=comp143203_c0_seq1.mrna1;geneID=comp143203_c0_seq1.path1;Name=comp143203_c0_seq1;Dir=indeterminatecoverage=90.3;identity=100.0;matches=261;mismatches=0;indels=0;unknowns=0;Target=comp143203_c0_seq1 255 196 .;locus=RLOC_00017050
Chr2	stalkie_big_nohaplotig	exon	45311997	45312006	100	+	.	Parent=comp143203_c0_seq1.mrna1;Target=comp143203_c0_seq1 38 29 .
Chr2	stalkie_big_nohaplotig	exon	45313705	45313955	100	+	.	Parent=comp143203_c0_seq1.mrna1;Target=comp143203_c0_seq1 289 39 .
Chr2	stalkie_big_nohaplotig	CDS	45313862	45313921	.	+	0	Parent=comp143203_c0_seq1.mrna1
Chr2	gffcl	locus	45312348	45313638	.	+	.	ID=RLOC_00017051;geneIDs=comp162614_c0_seq1.path1;transcripts=comp162614_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45312348	45313638	.	+	.	ID=comp162614_c0_seq1.mrna1;geneID=comp162614_c0_seq1.path1;Name=comp162614_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=1275;mismatches=16;indels=22;unknowns=0;Target=comp162614_c0_seq1 1313 1 .;CDS_Target=comp162614_c0_seq1 553 428 .;locus=RLOC_00017051
Chr2	stalkie_big_nohaplotig	exon	45312348	45313638	97	+	.	Parent=comp162614_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	45312775	45312900	.	+	0	Parent=comp162614_c0_seq1.mrna1
Chr2	gffcl	locus	45314012	45314407	.	+	.	ID=RLOC_00017052;geneIDs=comp84273_c0_seq1.path1;transcripts=comp84273_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45314012	45314407	.	+	.	ID=comp84273_c0_seq1.mrna1;geneID=comp84273_c0_seq1.path1;Name=comp84273_c0_seq1;Dir=indeterminatecoverage=91.5;identity=100.0;matches=396;mismatches=0;indels=0;unknowns=0;Target=comp84273_c0_seq1 433 38 .;CDS_Target=comp84273_c0_seq1 432 364 .;locus=RLOC_00017052
Chr2	stalkie_big_nohaplotig	exon	45314012	45314407	100	+	.	Parent=comp84273_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	45314338	45314406	.	+	0	Parent=comp84273_c0_seq1.mrna1
Chr2	gffcl	locus	45372730	45387750	.	.	.	ID=RLOC_00017053;geneIDs=comp153065_c0_seq1.path1,comp159075_c0_seq1.path1;transcripts=comp153065_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45372730	45385906	.	-	.	ID=comp153065_c0_seq1.mrna1;geneID=comp153065_c0_seq1.path1;Name=comp153065_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=1109;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017053
Chr2	stalkie_big_nohaplotig	exon	45372730	45372957	100	-	.	Parent=comp153065_c0_seq1.mrna1;Target=comp153065_c0_seq1 884 1111 +
Chr2	stalkie_big_nohaplotig	exon	45384954	45385500	100	-	.	Parent=comp153065_c0_seq1.mrna1;Target=comp153065_c0_seq1 337 883 +
Chr2	stalkie_big_nohaplotig	exon	45385571	45385906	99	-	.	Parent=comp153065_c0_seq1.mrna1;Target=comp153065_c0_seq1 1 336 +
Chr2	stalkie_big_nohaplotig	CDS	45372847	45372957	.	-	0	Parent=comp153065_c0_seq1.mrna1;Target=comp153065_c0_seq1 884 994 +
Chr2	stalkie_big_nohaplotig	CDS	45384954	45384971	.	-	0	Parent=comp153065_c0_seq1.mrna1;Target=comp153065_c0_seq1 866 883 +
Chr2	gffcl	locus	45679708	45682647	.	+	.	ID=RLOC_00017054;geneIDs=comp149997_c0_seq1.path1;transcripts=comp149997_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45679708	45682647	.	+	.	ID=comp149997_c0_seq1.mrna1;geneID=comp149997_c0_seq1.path1;Name=comp149997_c0_seq1;Dir=sensecoverage=100.0;identity=90.7;matches=860;mismatches=53;indels=35;unknowns=0;Target=comp149997_c0_seq1 639 755 +;locus=RLOC_00017054
Chr2	stalkie_big_nohaplotig	exon	45679708	45679894	95	+	.	Parent=comp149997_c0_seq1.mrna1;Target=comp149997_c0_seq1 1 187 +
Chr2	stalkie_big_nohaplotig	exon	45681855	45682249	95	+	.	Parent=comp149997_c0_seq1.mrna1;Target=comp149997_c0_seq1 188 581 +
Chr2	stalkie_big_nohaplotig	exon	45682282	45682647	83	+	.	Parent=comp149997_c0_seq1.mrna1;Target=comp149997_c0_seq1 591 922 +
Chr2	stalkie_big_nohaplotig	CDS	45682364	45682480	.	+	0	Parent=comp149997_c0_seq1.mrna1
Chr2	gffcl	locus	45680741	45681525	.	+	.	ID=RLOC_00017055;geneIDs=comp136806_c0_seq1.path1;transcripts=comp136806_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45680741	45681525	.	+	.	ID=comp136806_c0_seq1.mrna1;geneID=comp136806_c0_seq1.path1;Name=comp136806_c0_seq1;Dir=indeterminatecoverage=96.4;identity=96.0;matches=763;mismatches=22;indels=10;unknowns=0;Target=comp136806_c0_seq1 825 31 .;CDS_Target=comp136806_c0_seq1 298 32 .;locus=RLOC_00017055
Chr2	stalkie_big_nohaplotig	exon	45680741	45681525	95	+	.	Parent=comp136806_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	45680742	45681008	.	+	0	Parent=comp136806_c0_seq1.mrna1
Chr2	gffcl	locus	45695243	45695479	.	+	.	ID=RLOC_00017056;geneIDs=comp116446_c0_seq1.path1;transcripts=comp116446_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45695243	45695479	.	+	.	ID=comp116446_c0_seq1.mrna1;geneID=comp116446_c0_seq1.path1;Name=comp116446_c0_seq1;Dir=indeterminatecoverage=88.1;identity=98.7;matches=235;mismatches=2;indels=1;unknowns=0;Target=comp116446_c0_seq1 241 4 .;CDS_Target=comp116446_c0_seq1 162 4 .;locus=RLOC_00017056
Chr2	stalkie_big_nohaplotig	exon	45695243	45695479	98	+	.	Parent=comp116446_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	45695243	45695401	.	+	0	Parent=comp116446_c0_seq1.mrna1
Chr2	gffcl	locus	45695598	45716389	.	+	.	ID=RLOC_00017057;geneIDs=FBgn0025693.1.path1;transcripts=FBgn0025693.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45695598	45716389	.	+	.	ID=FBgn0025693.1.mrna1;geneID=FBgn0025693.1.path1;Name=FBgn0025693.1;Dir=sensecoverage=100.0;identity=98.8;matches=1367;mismatches=10;indels=6;unknowns=0;locus=RLOC_00017057
Chr2	stalkie_big_nohaplotig	exon	45695598	45695906	96	+	.	Parent=FBgn0025693.1.mrna1;Target=FBgn0025693.1 1 303 +
Chr2	stalkie_big_nohaplotig	exon	45709949	45710089	100	+	.	Parent=FBgn0025693.1.mrna1;Target=FBgn0025693.1 304 444 +
Chr2	stalkie_big_nohaplotig	exon	45710328	45710490	100	+	.	Parent=FBgn0025693.1.mrna1;Target=FBgn0025693.1 445 607 +
Chr2	stalkie_big_nohaplotig	exon	45712590	45712743	100	+	.	Parent=FBgn0025693.1.mrna1;Target=FBgn0025693.1 608 761 +
Chr2	stalkie_big_nohaplotig	exon	45713097	45713258	97	+	.	Parent=FBgn0025693.1.mrna1;Target=FBgn0025693.1 762 923 +
Chr2	stalkie_big_nohaplotig	exon	45715728	45715833	99	+	.	Parent=FBgn0025693.1.mrna1;Target=FBgn0025693.1 924 1029 +
Chr2	stalkie_big_nohaplotig	exon	45715900	45716069	100	+	.	Parent=FBgn0025693.1.mrna1;Target=FBgn0025693.1 1030 1199 +
Chr2	stalkie_big_nohaplotig	exon	45716131	45716201	100	+	.	Parent=FBgn0025693.1.mrna1;Target=FBgn0025693.1 1200 1270 +
Chr2	stalkie_big_nohaplotig	exon	45716283	45716389	100	+	.	Parent=FBgn0025693.1.mrna1;Target=FBgn0025693.1 1271 1377 +
Chr2	stalkie_big_nohaplotig	CDS	45695598	45695906	.	+	0	Parent=FBgn0025693.1.mrna1;Target=FBgn0025693.1 1 303 +
Chr2	stalkie_big_nohaplotig	CDS	45709949	45710089	.	+	0	Parent=FBgn0025693.1.mrna1;Target=FBgn0025693.1 304 444 +
Chr2	stalkie_big_nohaplotig	CDS	45710328	45710490	.	+	0	Parent=FBgn0025693.1.mrna1;Target=FBgn0025693.1 445 607 +
Chr2	stalkie_big_nohaplotig	CDS	45712590	45712743	.	+	2	Parent=FBgn0025693.1.mrna1;Target=FBgn0025693.1 608 761 +
Chr2	stalkie_big_nohaplotig	CDS	45713097	45713258	.	+	1	Parent=FBgn0025693.1.mrna1;Target=FBgn0025693.1 762 923 +
Chr2	stalkie_big_nohaplotig	CDS	45715728	45715833	.	+	1	Parent=FBgn0025693.1.mrna1;Target=FBgn0025693.1 924 1029 +
Chr2	stalkie_big_nohaplotig	CDS	45715900	45716069	.	+	0	Parent=FBgn0025693.1.mrna1;Target=FBgn0025693.1 1030 1199 +
Chr2	stalkie_big_nohaplotig	CDS	45716131	45716201	.	+	1	Parent=FBgn0025693.1.mrna1;Target=FBgn0025693.1 1200 1270 +
Chr2	stalkie_big_nohaplotig	CDS	45716283	45716389	.	+	2	Parent=FBgn0025693.1.mrna1;Target=FBgn0025693.1 1271 1377 +
Chr2	gffcl	locus	45725973	45726489	.	+	.	ID=RLOC_00017058;geneIDs=FBgn0034967.2.path1;transcripts=FBgn0034967.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45725973	45726489	.	+	.	ID=FBgn0034967.2.mrna1;geneID=FBgn0034967.2.path1;Name=FBgn0034967.2;Dir=sensecoverage=99.5;identity=99.8;matches=417;mismatches=1;indels=0;unknowns=3;locus=RLOC_00017058
Chr2	stalkie_big_nohaplotig	exon	45725973	45726209	99	+	.	Parent=FBgn0034967.2.mrna1;Target=FBgn0034967.2 3 239 +
Chr2	stalkie_big_nohaplotig	exon	45726306	45726489	100	+	.	Parent=FBgn0034967.2.mrna1;Target=FBgn0034967.2 240 423 +
Chr2	stalkie_big_nohaplotig	CDS	45725974	45726209	.	+	0	Parent=FBgn0034967.2.mrna1;Target=FBgn0034967.2 4 239 +
Chr2	stalkie_big_nohaplotig	CDS	45726306	45726489	.	+	1	Parent=FBgn0034967.2.mrna1;Target=FBgn0034967.2 240 423 +
Chr2	gffcl	locus	45744324	45747337	.	+	.	ID=RLOC_00017060;geneIDs=comp161766_c0_seq1.path1;transcripts=comp161766_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45744324	45747337	.	+	.	ID=comp161766_c0_seq1.mrna1;geneID=comp161766_c0_seq1.path1;Name=comp161766_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=2979;mismatches=35;indels=1;unknowns=0;Target=comp161766_c0_seq1 3015 1 .;CDS_Target=comp161766_c0_seq1 1879 2 .;locus=RLOC_00017060
Chr2	stalkie_big_nohaplotig	exon	45744324	45747337	98	+	.	Parent=comp161766_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	45744325	45746201	.	+	0	Parent=comp161766_c0_seq1.mrna1
Chr2	gffcl	locus	45747430	45747820	.	+	.	ID=RLOC_00017061;geneIDs=comp116533_c0_seq1.path1;transcripts=comp116533_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45747430	45747820	.	+	.	ID=comp116533_c0_seq1.mrna1;geneID=comp116533_c0_seq1.path1;Name=comp116533_c0_seq1;Dir=indeterminatecoverage=97.5;identity=100.0;matches=391;mismatches=0;indels=0;unknowns=0;Target=comp116533_c0_seq1 399 9 .;CDS_Target=comp116533_c0_seq1 157 11 .;locus=RLOC_00017061
Chr2	stalkie_big_nohaplotig	exon	45747430	45747820	100	+	.	Parent=comp116533_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	45747432	45747578	.	+	0	Parent=comp116533_c0_seq1.mrna1
Chr2	gffcl	locus	45825540	45826259	.	+	.	ID=RLOC_00017062;geneIDs=FBgn0259719.1.path1;transcripts=FBgn0259719.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45825540	45826259	.	+	.	ID=FBgn0259719.1.mrna1;geneID=FBgn0259719.1.path1;Name=FBgn0259719.1;Dir=sensecoverage=100.0;identity=99.7;matches=287;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017062
Chr2	stalkie_big_nohaplotig	exon	45825540	45825649	100	+	.	Parent=FBgn0259719.1.mrna1;Target=FBgn0259719.1 1 110 +
Chr2	stalkie_big_nohaplotig	exon	45826082	45826259	99	+	.	Parent=FBgn0259719.1.mrna1;Target=FBgn0259719.1 111 288 +
Chr2	stalkie_big_nohaplotig	CDS	45825540	45825649	.	+	0	Parent=FBgn0259719.1.mrna1;Target=FBgn0259719.1 1 110 +
Chr2	stalkie_big_nohaplotig	CDS	45826082	45826259	.	+	1	Parent=FBgn0259719.1.mrna1;Target=FBgn0259719.1 111 288 +
Chr2	gffcl	locus	45866419	45887765	.	-	.	ID=RLOC_00017064;geneIDs=FBgn0034002.1.path1;transcripts=FBgn0034002.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45866419	45887765	.	-	.	ID=FBgn0034002.1.mrna1;geneID=FBgn0034002.1.path1;Name=FBgn0034002.1;Dir=sensecoverage=100.0;identity=99.3;matches=1877;mismatches=13;indels=0;unknowns=0;locus=RLOC_00017064
Chr2	stalkie_big_nohaplotig	exon	45866419	45866574	99	-	.	Parent=FBgn0034002.1.mrna1;Target=FBgn0034002.1 1735 1890 +
Chr2	stalkie_big_nohaplotig	exon	45867913	45868018	100	-	.	Parent=FBgn0034002.1.mrna1;Target=FBgn0034002.1 1629 1734 +
Chr2	stalkie_big_nohaplotig	exon	45868078	45868192	100	-	.	Parent=FBgn0034002.1.mrna1;Target=FBgn0034002.1 1514 1628 +
Chr2	stalkie_big_nohaplotig	exon	45868267	45868594	100	-	.	Parent=FBgn0034002.1.mrna1;Target=FBgn0034002.1 1186 1513 +
Chr2	stalkie_big_nohaplotig	exon	45868660	45868820	98	-	.	Parent=FBgn0034002.1.mrna1;Target=FBgn0034002.1 1025 1185 +
Chr2	stalkie_big_nohaplotig	exon	45868912	45869311	99	-	.	Parent=FBgn0034002.1.mrna1;Target=FBgn0034002.1 625 1024 +
Chr2	stalkie_big_nohaplotig	exon	45869437	45869478	100	-	.	Parent=FBgn0034002.1.mrna1;Target=FBgn0034002.1 583 624 +
Chr2	stalkie_big_nohaplotig	exon	45873151	45873267	100	-	.	Parent=FBgn0034002.1.mrna1;Target=FBgn0034002.1 466 582 +
Chr2	stalkie_big_nohaplotig	exon	45873328	45873464	99	-	.	Parent=FBgn0034002.1.mrna1;Target=FBgn0034002.1 329 465 +
Chr2	stalkie_big_nohaplotig	exon	45887377	45887497	99	-	.	Parent=FBgn0034002.1.mrna1;Target=FBgn0034002.1 208 328 +
Chr2	stalkie_big_nohaplotig	exon	45887559	45887765	98	-	.	Parent=FBgn0034002.1.mrna1;Target=FBgn0034002.1 1 207 +
Chr2	stalkie_big_nohaplotig	CDS	45866419	45866574	.	-	0	Parent=FBgn0034002.1.mrna1;Target=FBgn0034002.1 1735 1890 +
Chr2	stalkie_big_nohaplotig	CDS	45867913	45868018	.	-	1	Parent=FBgn0034002.1.mrna1;Target=FBgn0034002.1 1629 1734 +
Chr2	stalkie_big_nohaplotig	CDS	45868078	45868192	.	-	2	Parent=FBgn0034002.1.mrna1;Target=FBgn0034002.1 1514 1628 +
Chr2	stalkie_big_nohaplotig	CDS	45868267	45868594	.	-	0	Parent=FBgn0034002.1.mrna1;Target=FBgn0034002.1 1186 1513 +
Chr2	stalkie_big_nohaplotig	CDS	45868660	45868820	.	-	2	Parent=FBgn0034002.1.mrna1;Target=FBgn0034002.1 1025 1185 +
Chr2	stalkie_big_nohaplotig	CDS	45868912	45869311	.	-	0	Parent=FBgn0034002.1.mrna1;Target=FBgn0034002.1 625 1024 +
Chr2	stalkie_big_nohaplotig	CDS	45869437	45869478	.	-	0	Parent=FBgn0034002.1.mrna1;Target=FBgn0034002.1 583 624 +
Chr2	stalkie_big_nohaplotig	CDS	45873151	45873267	.	-	0	Parent=FBgn0034002.1.mrna1;Target=FBgn0034002.1 466 582 +
Chr2	stalkie_big_nohaplotig	CDS	45873328	45873464	.	-	2	Parent=FBgn0034002.1.mrna1;Target=FBgn0034002.1 329 465 +
Chr2	stalkie_big_nohaplotig	CDS	45887377	45887497	.	-	0	Parent=FBgn0034002.1.mrna1;Target=FBgn0034002.1 208 328 +
Chr2	stalkie_big_nohaplotig	CDS	45887559	45887765	.	-	0	Parent=FBgn0034002.1.mrna1;Target=FBgn0034002.1 1 207 +
Chr2	gffcl	locus	45880057	45884822	.	+	.	ID=RLOC_00017065;geneIDs=FBgn0001187.1.path1,comp159637_c0_seq1.path1;transcripts=FBgn0001187.1.mrna1,comp159637_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45880057	45884822	.	+	.	ID=FBgn0001187.1.mrna1;geneID=FBgn0001187.1.path1;Name=FBgn0001187.1;Dir=sensecoverage=100.0;identity=99.2;matches=1410;mismatches=12;indels=0;unknowns=0;locus=RLOC_00017065
Chr2	stalkie_big_nohaplotig	exon	45880057	45880969	99	+	.	Parent=FBgn0001187.1.mrna1;Target=FBgn0001187.1 1 913 +
Chr2	stalkie_big_nohaplotig	exon	45884314	45884822	98	+	.	Parent=FBgn0001187.1.mrna1;Target=FBgn0001187.1 914 1422 +
Chr2	stalkie_big_nohaplotig	CDS	45880057	45880969	.	+	0	Parent=FBgn0001187.1.mrna1;Target=FBgn0001187.1 1 913 +
Chr2	stalkie_big_nohaplotig	CDS	45884314	45884822	.	+	2	Parent=FBgn0001187.1.mrna1;Target=FBgn0001187.1 914 1422 +
Chr2	stalkie_big_nohaplotig	mRNA	45882001	45884334	.	+	.	ID=comp159637_c0_seq1.mrna1;geneID=comp159637_c0_seq1.path1;Name=comp159637_c0_seq1;Dir=indeterminatecoverage=99.9;identity=94.8;matches=2246;mismatches=74;indels=49;unknowns=0;Target=comp159637_c0_seq1 2357 3 .;CDS_Target=comp159637_c0_seq1 1843 1757 .;locus=RLOC_00017065
Chr2	stalkie_big_nohaplotig	exon	45882001	45884334	94	+	.	Parent=comp159637_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	45883749	45883836	.	+	0	Parent=comp159637_c0_seq1.mrna1
Chr2	gffcl	locus	45885930	46199375	.	-	.	ID=RLOC_00017066;geneIDs=comp154885_c0_seq1.path1;transcripts=comp154885_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45885930	46199375	.	-	.	ID=comp154885_c0_seq1.mrna1;geneID=comp154885_c0_seq1.path1;Name=comp154885_c0_seq1;Dir=indeterminatecoverage=92.7;identity=97.4;matches=1037;mismatches=17;indels=11;unknowns=0;Target=comp154885_c0_seq1 526 440 .;locus=RLOC_00017066
Chr2	stalkie_big_nohaplotig	exon	45885930	45885937	100	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 1104 1097 .
Chr2	stalkie_big_nohaplotig	exon	45886452	45886458	100	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 1096 1090 .
Chr2	stalkie_big_nohaplotig	exon	45893858	45893865	62	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 1089 1082 .
Chr2	stalkie_big_nohaplotig	exon	45896649	45896654	83	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 1081 1076 .
Chr2	stalkie_big_nohaplotig	exon	45901784	45901788	100	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 1075 1071 .
Chr2	stalkie_big_nohaplotig	exon	45909258	45909261	100	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 1070 1067 .
Chr2	stalkie_big_nohaplotig	exon	45922462	45922463	100	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 1066 1065 .
Chr2	stalkie_big_nohaplotig	exon	45930007	45930032	66	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 1064 1029 .
Chr2	stalkie_big_nohaplotig	exon	45968261	45968262	100	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 1028 1027 .
Chr2	stalkie_big_nohaplotig	exon	45970202	45970206	100	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 1026 1022 .
Chr2	stalkie_big_nohaplotig	exon	45972928	45972933	100	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 1021 1016 .
Chr2	stalkie_big_nohaplotig	exon	45981053	45981054	100	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 1015 1014 .
Chr2	stalkie_big_nohaplotig	exon	45987656	45987663	100	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 1013 1006 .
Chr2	stalkie_big_nohaplotig	exon	45995694	45995704	100	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 1005 995 .
Chr2	stalkie_big_nohaplotig	exon	46016810	46016811	100	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 994 993 .
Chr2	stalkie_big_nohaplotig	exon	46025457	46025458	100	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 992 991 .
Chr2	stalkie_big_nohaplotig	exon	46032635	46032637	100	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 990 988 .
Chr2	stalkie_big_nohaplotig	exon	46035493	46035496	100	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 987 984 .
Chr2	stalkie_big_nohaplotig	exon	46041545	46041546	100	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 983 982 .
Chr2	stalkie_big_nohaplotig	exon	46044603	46044606	100	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 981 978 .
Chr2	stalkie_big_nohaplotig	exon	46051745	46051752	100	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 977 970 .
Chr2	stalkie_big_nohaplotig	exon	46051769	46051776	100	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 932 925 .
Chr2	stalkie_big_nohaplotig	exon	46059225	46059226	100	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 924 923 .
Chr2	stalkie_big_nohaplotig	exon	46198457	46199375	98	-	.	Parent=comp154885_c0_seq1.mrna1;Target=comp154885_c0_seq1 922 3 .
Chr2	stalkie_big_nohaplotig	CDS	46198852	46198938	.	-	0	Parent=comp154885_c0_seq1.mrna1
Chr2	gffcl	locus	45904356	45915927	.	-	.	ID=RLOC_00017067;geneIDs=FBgn0259878.1.path1;transcripts=FBgn0259878.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45904356	45915927	.	-	.	ID=FBgn0259878.1.mrna1;geneID=FBgn0259878.1.path1;Name=FBgn0259878.1;Dir=sensecoverage=99.9;identity=99.7;matches=1602;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017067
Chr2	stalkie_big_nohaplotig	exon	45904356	45905079	99	-	.	Parent=FBgn0259878.1.mrna1;Target=FBgn0259878.1 884 1607 +
Chr2	stalkie_big_nohaplotig	exon	45908908	45909093	100	-	.	Parent=FBgn0259878.1.mrna1;Target=FBgn0259878.1 698 883 +
Chr2	stalkie_big_nohaplotig	exon	45915231	45915927	99	-	.	Parent=FBgn0259878.1.mrna1;Target=FBgn0259878.1 1 697 +
Chr2	stalkie_big_nohaplotig	CDS	45904358	45905079	.	-	2	Parent=FBgn0259878.1.mrna1;Target=FBgn0259878.1 884 1605 +
Chr2	stalkie_big_nohaplotig	CDS	45908908	45909093	.	-	2	Parent=FBgn0259878.1.mrna1;Target=FBgn0259878.1 698 883 +
Chr2	stalkie_big_nohaplotig	CDS	45915231	45915927	.	-	0	Parent=FBgn0259878.1.mrna1;Target=FBgn0259878.1 1 697 +
Chr2	gffcl	locus	45912845	45913409	.	+	.	ID=RLOC_00017068;geneIDs=comp147016_c0_seq1.path1;transcripts=comp147016_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45912845	45913409	.	+	.	ID=comp147016_c0_seq1.mrna1;geneID=comp147016_c0_seq1.path1;Name=comp147016_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.7;matches=537;mismatches=24;indels=6;unknowns=0;Target=comp147016_c0_seq1 563 1 .;CDS_Target=comp147016_c0_seq1 318 244 .;locus=RLOC_00017068
Chr2	stalkie_big_nohaplotig	exon	45912845	45913409	94	+	.	Parent=comp147016_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	45913090	45913164	.	+	0	Parent=comp147016_c0_seq1.mrna1
Chr2	gffcl	locus	45992035	45992784	.	+	.	ID=RLOC_00017069;geneIDs=comp144258_c0_seq1.path1;transcripts=comp144258_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	45992035	45992784	.	+	.	ID=comp144258_c0_seq1.mrna1;geneID=comp144258_c0_seq1.path1;Name=comp144258_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=749;mismatches=1;indels=0;unknowns=0;Target=comp144258_c0_seq1 750 1 .;CDS_Target=comp144258_c0_seq1 577 485 .;locus=RLOC_00017069
Chr2	stalkie_big_nohaplotig	exon	45992035	45992784	99	+	.	Parent=comp144258_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	45992519	45992611	.	+	0	Parent=comp144258_c0_seq1.mrna1
Chr2	gffcl	locus	46015740	46026263	.	+	.	ID=RLOC_00017070;geneIDs=FBgn0003328.2.path1;transcripts=FBgn0003328.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46015740	46026263	.	+	.	ID=FBgn0003328.2.mrna1;geneID=FBgn0003328.2.path1;Name=FBgn0003328.2;Dir=sensecoverage=100.0;identity=99.6;matches=3385;mismatches=14;indels=0;unknowns=0;locus=RLOC_00017070
Chr2	stalkie_big_nohaplotig	exon	46015740	46015975	99	+	.	Parent=FBgn0003328.2.mrna1;Target=FBgn0003328.2 1 236 +
Chr2	stalkie_big_nohaplotig	exon	46020059	46020815	99	+	.	Parent=FBgn0003328.2.mrna1;Target=FBgn0003328.2 237 993 +
Chr2	stalkie_big_nohaplotig	exon	46020884	46021090	99	+	.	Parent=FBgn0003328.2.mrna1;Target=FBgn0003328.2 994 1200 +
Chr2	stalkie_big_nohaplotig	exon	46021178	46021862	99	+	.	Parent=FBgn0003328.2.mrna1;Target=FBgn0003328.2 1201 1885 +
Chr2	stalkie_big_nohaplotig	exon	46022081	46022213	100	+	.	Parent=FBgn0003328.2.mrna1;Target=FBgn0003328.2 1886 2018 +
Chr2	stalkie_big_nohaplotig	exon	46022280	46022648	99	+	.	Parent=FBgn0003328.2.mrna1;Target=FBgn0003328.2 2019 2387 +
Chr2	stalkie_big_nohaplotig	exon	46023374	46023443	100	+	.	Parent=FBgn0003328.2.mrna1;Target=FBgn0003328.2 2388 2457 +
Chr2	stalkie_big_nohaplotig	exon	46023504	46023837	100	+	.	Parent=FBgn0003328.2.mrna1;Target=FBgn0003328.2 2458 2791 +
Chr2	stalkie_big_nohaplotig	exon	46025579	46026075	99	+	.	Parent=FBgn0003328.2.mrna1;Target=FBgn0003328.2 2792 3288 +
Chr2	stalkie_big_nohaplotig	exon	46026153	46026263	98	+	.	Parent=FBgn0003328.2.mrna1;Target=FBgn0003328.2 3289 3399 +
Chr2	stalkie_big_nohaplotig	CDS	46015740	46015975	.	+	0	Parent=FBgn0003328.2.mrna1;Target=FBgn0003328.2 1 236 +
Chr2	stalkie_big_nohaplotig	CDS	46020059	46020815	.	+	1	Parent=FBgn0003328.2.mrna1;Target=FBgn0003328.2 237 993 +
Chr2	stalkie_big_nohaplotig	CDS	46020884	46021090	.	+	0	Parent=FBgn0003328.2.mrna1;Target=FBgn0003328.2 994 1200 +
Chr2	stalkie_big_nohaplotig	CDS	46021178	46021862	.	+	0	Parent=FBgn0003328.2.mrna1;Target=FBgn0003328.2 1201 1885 +
Chr2	stalkie_big_nohaplotig	CDS	46022081	46022213	.	+	2	Parent=FBgn0003328.2.mrna1;Target=FBgn0003328.2 1886 2018 +
Chr2	stalkie_big_nohaplotig	CDS	46022280	46022648	.	+	1	Parent=FBgn0003328.2.mrna1;Target=FBgn0003328.2 2019 2387 +
Chr2	stalkie_big_nohaplotig	CDS	46023374	46023443	.	+	1	Parent=FBgn0003328.2.mrna1;Target=FBgn0003328.2 2388 2457 +
Chr2	stalkie_big_nohaplotig	CDS	46023504	46023837	.	+	0	Parent=FBgn0003328.2.mrna1;Target=FBgn0003328.2 2458 2791 +
Chr2	stalkie_big_nohaplotig	CDS	46025579	46026075	.	+	2	Parent=FBgn0003328.2.mrna1;Target=FBgn0003328.2 2792 3288 +
Chr2	stalkie_big_nohaplotig	CDS	46026153	46026263	.	+	0	Parent=FBgn0003328.2.mrna1;Target=FBgn0003328.2 3289 3399 +
Chr2	gffcl	locus	46030478	46041734	.	+	.	ID=RLOC_00017071;geneIDs=FBgn0003328.1.path1;transcripts=FBgn0003328.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46030478	46041734	.	+	.	ID=FBgn0003328.1.mrna1;geneID=FBgn0003328.1.path1;Name=FBgn0003328.1;Dir=sensecoverage=100.0;identity=98.9;matches=3052;mismatches=34;indels=0;unknowns=0;locus=RLOC_00017071
Chr2	stalkie_big_nohaplotig	exon	46030478	46030683	98	+	.	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 1 206 +
Chr2	stalkie_big_nohaplotig	exon	46030972	46031345	99	+	.	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 207 580 +
Chr2	stalkie_big_nohaplotig	exon	46031419	46031553	99	+	.	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 581 715 +
Chr2	stalkie_big_nohaplotig	exon	46031617	46031816	99	+	.	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 716 915 +
Chr2	stalkie_big_nohaplotig	exon	46031869	46032078	99	+	.	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 916 1125 +
Chr2	stalkie_big_nohaplotig	exon	46036891	46036993	100	+	.	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 1126 1228 +
Chr2	stalkie_big_nohaplotig	exon	46037063	46037641	98	+	.	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 1229 1807 +
Chr2	stalkie_big_nohaplotig	exon	46037750	46037879	97	+	.	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 1808 1937 +
Chr2	stalkie_big_nohaplotig	exon	46038627	46039001	98	+	.	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 1938 2312 +
Chr2	stalkie_big_nohaplotig	exon	46039099	46039168	97	+	.	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 2313 2382 +
Chr2	stalkie_big_nohaplotig	exon	46039246	46039685	98	+	.	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 2383 2822 +
Chr2	stalkie_big_nohaplotig	exon	46041412	46041550	99	+	.	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 2823 2961 +
Chr2	stalkie_big_nohaplotig	exon	46041610	46041734	98	+	.	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 2962 3086 +
Chr2	stalkie_big_nohaplotig	CDS	46030478	46030683	.	+	0	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 1 206 +
Chr2	stalkie_big_nohaplotig	CDS	46030972	46031345	.	+	1	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 207 580 +
Chr2	stalkie_big_nohaplotig	CDS	46031419	46031553	.	+	2	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 581 715 +
Chr2	stalkie_big_nohaplotig	CDS	46031617	46031816	.	+	2	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 716 915 +
Chr2	stalkie_big_nohaplotig	CDS	46031869	46032078	.	+	0	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 916 1125 +
Chr2	stalkie_big_nohaplotig	CDS	46036891	46036993	.	+	0	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 1126 1228 +
Chr2	stalkie_big_nohaplotig	CDS	46037063	46037641	.	+	2	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 1229 1807 +
Chr2	stalkie_big_nohaplotig	CDS	46037750	46037879	.	+	2	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 1808 1937 +
Chr2	stalkie_big_nohaplotig	CDS	46038627	46039001	.	+	1	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 1938 2312 +
Chr2	stalkie_big_nohaplotig	CDS	46039099	46039168	.	+	1	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 2313 2382 +
Chr2	stalkie_big_nohaplotig	CDS	46039246	46039685	.	+	0	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 2383 2822 +
Chr2	stalkie_big_nohaplotig	CDS	46041412	46041550	.	+	1	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 2823 2961 +
Chr2	stalkie_big_nohaplotig	CDS	46041610	46041732	.	+	0	Parent=FBgn0003328.1.mrna1;Target=FBgn0003328.1 2962 3084 +
Chr2	gffcl	locus	46043131	46045011	.	+	.	ID=RLOC_00017072;geneIDs=comp162132_c0_seq1.path1;transcripts=comp162132_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46043131	46045011	.	+	.	ID=comp162132_c0_seq1.mrna1;geneID=comp162132_c0_seq1.path1;Name=comp162132_c0_seq1;Dir=sensecoverage=100.0;identity=93.2;matches=1458;mismatches=44;indels=63;unknowns=0;Target=comp162132_c0_seq1 1235 1423 +;locus=RLOC_00017072
Chr2	stalkie_big_nohaplotig	exon	46043131	46043745	94	+	.	Parent=comp162132_c0_seq1.mrna1;Target=comp162132_c0_seq1 1 608 +
Chr2	stalkie_big_nohaplotig	exon	46044097	46045011	92	+	.	Parent=comp162132_c0_seq1.mrna1;Target=comp162132_c0_seq1 609 1537 +
Chr2	stalkie_big_nohaplotig	CDS	46044709	46044897	.	+	0	Parent=comp162132_c0_seq1.mrna1
Chr2	gffcl	locus	46045939	46170117	.	-	.	ID=RLOC_00017073;geneIDs=FBgn0083959.1.path1;transcripts=FBgn0083959.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46045939	46170117	.	-	.	ID=FBgn0083959.1.mrna1;geneID=FBgn0083959.1.path1;Name=FBgn0083959.1;Dir=sensecoverage=100.0;identity=96.1;matches=5762;mismatches=44;indels=189;unknowns=29;locus=RLOC_00017073
Chr2	stalkie_big_nohaplotig	exon	46045939	46047051	99	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 4723 5835 +
Chr2	stalkie_big_nohaplotig	exon	46052616	46052773	99	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 4565 4722 +
Chr2	stalkie_big_nohaplotig	exon	46057109	46057246	99	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 4427 4564 +
Chr2	stalkie_big_nohaplotig	exon	46057802	46057981	100	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 4247 4426 +
Chr2	stalkie_big_nohaplotig	exon	46058056	46058434	99	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 3868 4246 +
Chr2	stalkie_big_nohaplotig	exon	46058614	46058817	100	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 3664 3867 +
Chr2	stalkie_big_nohaplotig	exon	46062365	46062597	99	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 3431 3663 +
Chr2	stalkie_big_nohaplotig	exon	46063322	46063445	100	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 3307 3430 +
Chr2	stalkie_big_nohaplotig	exon	46064643	46064764	100	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 3185 3306 +
Chr2	stalkie_big_nohaplotig	exon	46064836	46064934	100	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 3086 3184 +
Chr2	stalkie_big_nohaplotig	exon	46070485	46070534	26	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 3067 3085 +
Chr2	stalkie_big_nohaplotig	exon	46070587	46070668	28	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 3040 3066 +
Chr2	stalkie_big_nohaplotig	exon	46070825	46070829	60	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 3035 3039 +
Chr2	stalkie_big_nohaplotig	exon	46070932	46070938	85	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 3028 3034 +
Chr2	stalkie_big_nohaplotig	exon	46071033	46071163	17	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 3000 3027 +
Chr2	stalkie_big_nohaplotig	exon	46071242	46071248	85	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2993 2999 +
Chr2	stalkie_big_nohaplotig	exon	46071310	46071318	88	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2984 2992 +
Chr2	stalkie_big_nohaplotig	exon	46071388	46071397	90	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2974 2983 +
Chr2	stalkie_big_nohaplotig	exon	46071573	46071578	66	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2968 2973 +
Chr2	stalkie_big_nohaplotig	exon	46071650	46071657	75	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2960 2967 +
Chr2	stalkie_big_nohaplotig	exon	46071716	46071719	100	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2956 2959 +
Chr2	stalkie_big_nohaplotig	exon	46075798	46076005	98	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2748 2955 +
Chr2	stalkie_big_nohaplotig	exon	46077752	46077909	100	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2590 2747 +
Chr2	stalkie_big_nohaplotig	exon	46078126	46078272	100	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2443 2589 +
Chr2	stalkie_big_nohaplotig	exon	46084274	46084330	100	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2386 2442 +
Chr2	stalkie_big_nohaplotig	exon	46092540	46092692	98	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2233 2385 +
Chr2	stalkie_big_nohaplotig	exon	46094516	46094727	99	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2021 2232 +
Chr2	stalkie_big_nohaplotig	exon	46095866	46096055	100	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 1831 2020 +
Chr2	stalkie_big_nohaplotig	exon	46096332	46096518	100	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 1644 1830 +
Chr2	stalkie_big_nohaplotig	exon	46105304	46105405	99	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 1542 1643 +
Chr2	stalkie_big_nohaplotig	exon	46105569	46105725	100	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 1385 1541 +
Chr2	stalkie_big_nohaplotig	exon	46105928	46106114	99	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 1198 1384 +
Chr2	stalkie_big_nohaplotig	exon	46110853	46111000	100	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 1050 1197 +
Chr2	stalkie_big_nohaplotig	exon	46114852	46115008	98	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 893 1049 +
Chr2	stalkie_big_nohaplotig	exon	46116188	46116324	99	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 756 892 +
Chr2	stalkie_big_nohaplotig	exon	46116587	46116746	100	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 596 755 +
Chr2	stalkie_big_nohaplotig	exon	46118736	46118808	98	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 523 595 +
Chr2	stalkie_big_nohaplotig	exon	46123534	46123674	100	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 382 522 +
Chr2	stalkie_big_nohaplotig	exon	46124907	46125069	100	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 219 381 +
Chr2	stalkie_big_nohaplotig	exon	46135935	46136017	100	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 136 218 +
Chr2	stalkie_big_nohaplotig	exon	46169983	46170117	100	-	.	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 1 135 +
Chr2	stalkie_big_nohaplotig	CDS	46045939	46047051	.	-	0	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 4723 5835 +
Chr2	stalkie_big_nohaplotig	CDS	46052616	46052773	.	-	2	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 4565 4722 +
Chr2	stalkie_big_nohaplotig	CDS	46057109	46057246	.	-	2	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 4427 4564 +
Chr2	stalkie_big_nohaplotig	CDS	46057802	46057981	.	-	2	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 4247 4426 +
Chr2	stalkie_big_nohaplotig	CDS	46058056	46058434	.	-	0	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 3868 4246 +
Chr2	stalkie_big_nohaplotig	CDS	46058614	46058817	.	-	0	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 3664 3867 +
Chr2	stalkie_big_nohaplotig	CDS	46062365	46062597	.	-	2	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 3431 3663 +
Chr2	stalkie_big_nohaplotig	CDS	46063322	46063445	.	-	0	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 3307 3430 +
Chr2	stalkie_big_nohaplotig	CDS	46064643	46064764	.	-	2	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 3185 3306 +
Chr2	stalkie_big_nohaplotig	CDS	46064836	46064934	.	-	2	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 3086 3184 +
Chr2	stalkie_big_nohaplotig	CDS	46070485	46070534	.	-	1	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 3067 3085 +
Chr2	stalkie_big_nohaplotig	CDS	46070587	46070668	.	-	2	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 3040 3066 +
Chr2	stalkie_big_nohaplotig	CDS	46070825	46070829	.	-	1	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 3035 3039 +
Chr2	stalkie_big_nohaplotig	CDS	46070932	46070938	.	-	2	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 3028 3034 +
Chr2	stalkie_big_nohaplotig	CDS	46071033	46071163	.	-	1	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 3000 3027 +
Chr2	stalkie_big_nohaplotig	CDS	46071242	46071248	.	-	2	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2993 2999 +
Chr2	stalkie_big_nohaplotig	CDS	46071310	46071318	.	-	2	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2984 2992 +
Chr2	stalkie_big_nohaplotig	CDS	46071388	46071397	.	-	0	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2974 2983 +
Chr2	stalkie_big_nohaplotig	CDS	46071573	46071578	.	-	0	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2968 2973 +
Chr2	stalkie_big_nohaplotig	CDS	46071650	46071657	.	-	2	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2960 2967 +
Chr2	stalkie_big_nohaplotig	CDS	46071716	46071719	.	-	0	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2956 2959 +
Chr2	stalkie_big_nohaplotig	CDS	46075798	46076005	.	-	1	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2748 2955 +
Chr2	stalkie_big_nohaplotig	CDS	46077752	46077909	.	-	0	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2590 2747 +
Chr2	stalkie_big_nohaplotig	CDS	46078126	46078272	.	-	0	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2443 2589 +
Chr2	stalkie_big_nohaplotig	CDS	46084274	46084330	.	-	0	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2386 2442 +
Chr2	stalkie_big_nohaplotig	CDS	46092540	46092692	.	-	0	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2233 2385 +
Chr2	stalkie_big_nohaplotig	CDS	46094516	46094727	.	-	2	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 2021 2232 +
Chr2	stalkie_big_nohaplotig	CDS	46095866	46096055	.	-	0	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 1831 2020 +
Chr2	stalkie_big_nohaplotig	CDS	46096332	46096518	.	-	1	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 1644 1830 +
Chr2	stalkie_big_nohaplotig	CDS	46105304	46105405	.	-	1	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 1542 1643 +
Chr2	stalkie_big_nohaplotig	CDS	46105569	46105725	.	-	2	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 1385 1541 +
Chr2	stalkie_big_nohaplotig	CDS	46105928	46106114	.	-	0	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 1198 1384 +
Chr2	stalkie_big_nohaplotig	CDS	46110853	46111000	.	-	1	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 1050 1197 +
Chr2	stalkie_big_nohaplotig	CDS	46114852	46115008	.	-	2	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 893 1049 +
Chr2	stalkie_big_nohaplotig	CDS	46116188	46116324	.	-	1	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 756 892 +
Chr2	stalkie_big_nohaplotig	CDS	46116587	46116746	.	-	2	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 596 755 +
Chr2	stalkie_big_nohaplotig	CDS	46118736	46118808	.	-	0	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 523 595 +
Chr2	stalkie_big_nohaplotig	CDS	46123534	46123674	.	-	0	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 382 522 +
Chr2	stalkie_big_nohaplotig	CDS	46124907	46125069	.	-	1	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 219 381 +
Chr2	stalkie_big_nohaplotig	CDS	46135935	46136017	.	-	0	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 136 218 +
Chr2	stalkie_big_nohaplotig	CDS	46169983	46170117	.	-	0	Parent=FBgn0083959.1.mrna1;Target=FBgn0083959.1 1 135 +
Chr2	gffcl	locus	46178680	46178965	.	-	.	ID=RLOC_00017074;geneIDs=comp145168_c0_seq1.path1;transcripts=comp145168_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46178680	46178965	.	-	.	ID=comp145168_c0_seq1.mrna1;geneID=comp145168_c0_seq1.path1;Name=comp145168_c0_seq1;Dir=antisensecoverage=90.8;identity=99.5;matches=215;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017074
Chr2	stalkie_big_nohaplotig	exon	46178680	46178800	100	-	.	Parent=comp145168_c0_seq1.mrna1;Target=comp145168_c0_seq1 23 143 -
Chr2	stalkie_big_nohaplotig	exon	46178871	46178965	98	-	.	Parent=comp145168_c0_seq1.mrna1;Target=comp145168_c0_seq1 144 238 -
Chr2	stalkie_big_nohaplotig	CDS	46178681	46178800	.	-	0	Parent=comp145168_c0_seq1.mrna1;Target=comp145168_c0_seq1 24 143 .
Chr2	stalkie_big_nohaplotig	CDS	46178871	46178963	.	-	0	Parent=comp145168_c0_seq1.mrna1;Target=comp145168_c0_seq1 144 236 .
Chr2	gffcl	locus	46194066	46194141	.	+	.	ID=RLOC_00017075;geneIDs=comp112857_c0_seq1.path2;transcripts=comp112857_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	46194066	46194141	.	+	.	ID=comp112857_c0_seq1.mrna2;geneID=comp112857_c0_seq1.path2;Name=comp112857_c0_seq1;Dir=indeterminatecoverage=15.7;identity=98.7;matches=75;mismatches=1;indels=0;unknowns=0;Target=comp112857_c0_seq1 485 410 .;locus=RLOC_00017075
Chr2	stalkie_big_nohaplotig	exon	46194066	46194141	98	+	.	Parent=comp112857_c0_seq1.mrna2
Chr2	gffcl	locus	46202497	46202747	.	-	.	ID=RLOC_00017076;geneIDs=comp117329_c0_seq1.path1;transcripts=comp117329_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46202497	46202747	.	-	.	ID=comp117329_c0_seq1.mrna1;geneID=comp117329_c0_seq1.path1;Name=comp117329_c0_seq1;Dir=sensecoverage=89.5;identity=99.5;matches=195;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017076
Chr2	stalkie_big_nohaplotig	exon	46202497	46202557	100	-	.	Parent=comp117329_c0_seq1.mrna1;Target=comp117329_c0_seq1 136 196 +
Chr2	stalkie_big_nohaplotig	exon	46202613	46202747	99	-	.	Parent=comp117329_c0_seq1.mrna1;Target=comp117329_c0_seq1 1 135 +
Chr2	stalkie_big_nohaplotig	CDS	46202526	46202557	.	-	2	Parent=comp117329_c0_seq1.mrna1;Target=comp117329_c0_seq1 136 167 +
Chr2	stalkie_big_nohaplotig	CDS	46202613	46202745	.	-	0	Parent=comp117329_c0_seq1.mrna1;Target=comp117329_c0_seq1 3 135 +
Chr2	gffcl	locus	46205188	46205468	.	-	.	ID=RLOC_00017077;geneIDs=comp135189_c0_seq1.path1;transcripts=comp135189_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46205188	46205468	.	-	.	ID=comp135189_c0_seq1.mrna1;geneID=comp135189_c0_seq1.path1;Name=comp135189_c0_seq1;Dir=antisensecoverage=90.0;identity=100.0;matches=208;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017077
Chr2	stalkie_big_nohaplotig	exon	46205188	46205266	100	-	.	Parent=comp135189_c0_seq1.mrna1;Target=comp135189_c0_seq1 24 102 -
Chr2	stalkie_big_nohaplotig	exon	46205340	46205468	100	-	.	Parent=comp135189_c0_seq1.mrna1;Target=comp135189_c0_seq1 103 231 -
Chr2	stalkie_big_nohaplotig	CDS	46205189	46205266	.	-	0	Parent=comp135189_c0_seq1.mrna1;Target=comp135189_c0_seq1 25 102 .
Chr2	stalkie_big_nohaplotig	CDS	46205340	46205399	.	-	0	Parent=comp135189_c0_seq1.mrna1;Target=comp135189_c0_seq1 103 162 .
Chr2	gffcl	locus	46260607	46261601	.	+	.	ID=RLOC_00017078;geneIDs=FBgn0034030.1.path1;transcripts=FBgn0034030.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46260607	46261601	.	+	.	ID=FBgn0034030.1.mrna1;geneID=FBgn0034030.1.path1;Name=FBgn0034030.1;Dir=sensecoverage=100.0;identity=99.8;matches=853;mismatches=1;indels=1;unknowns=0;Target=FBgn0034030.1 3 38 +;locus=RLOC_00017078
Chr2	stalkie_big_nohaplotig	exon	46260607	46260721	99	+	.	Parent=FBgn0034030.1.mrna1;Target=FBgn0034030.1 1 116 +
Chr2	stalkie_big_nohaplotig	exon	46260788	46261121	100	+	.	Parent=FBgn0034030.1.mrna1;Target=FBgn0034030.1 117 450 +
Chr2	stalkie_big_nohaplotig	exon	46261197	46261601	99	+	.	Parent=FBgn0034030.1.mrna1;Target=FBgn0034030.1 451 855 +
Chr2	stalkie_big_nohaplotig	CDS	46260609	46260643	.	+	0	Parent=FBgn0034030.1.mrna1
Chr2	gffcl	locus	46264299	46266048	.	+	.	ID=RLOC_00017079;geneIDs=FBgn0034029.1.path1;transcripts=FBgn0034029.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46264299	46266048	.	+	.	ID=FBgn0034029.1.mrna1;geneID=FBgn0034029.1.path1;Name=FBgn0034029.1;Dir=sensecoverage=100.0;identity=99.8;matches=1383;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017079
Chr2	stalkie_big_nohaplotig	exon	46264299	46264467	100	+	.	Parent=FBgn0034029.1.mrna1;Target=FBgn0034029.1 1 169 +
Chr2	stalkie_big_nohaplotig	exon	46264524	46264671	99	+	.	Parent=FBgn0034029.1.mrna1;Target=FBgn0034029.1 170 317 +
Chr2	stalkie_big_nohaplotig	exon	46264730	46265090	99	+	.	Parent=FBgn0034029.1.mrna1;Target=FBgn0034029.1 318 678 +
Chr2	stalkie_big_nohaplotig	exon	46265155	46265295	99	+	.	Parent=FBgn0034029.1.mrna1;Target=FBgn0034029.1 679 819 +
Chr2	stalkie_big_nohaplotig	exon	46265353	46265529	100	+	.	Parent=FBgn0034029.1.mrna1;Target=FBgn0034029.1 820 996 +
Chr2	stalkie_big_nohaplotig	exon	46265601	46265827	100	+	.	Parent=FBgn0034029.1.mrna1;Target=FBgn0034029.1 997 1223 +
Chr2	stalkie_big_nohaplotig	exon	46265886	46266048	100	+	.	Parent=FBgn0034029.1.mrna1;Target=FBgn0034029.1 1224 1386 +
Chr2	stalkie_big_nohaplotig	CDS	46264299	46264467	.	+	0	Parent=FBgn0034029.1.mrna1;Target=FBgn0034029.1 1 169 +
Chr2	stalkie_big_nohaplotig	CDS	46264524	46264671	.	+	2	Parent=FBgn0034029.1.mrna1;Target=FBgn0034029.1 170 317 +
Chr2	stalkie_big_nohaplotig	CDS	46264730	46265090	.	+	1	Parent=FBgn0034029.1.mrna1;Target=FBgn0034029.1 318 678 +
Chr2	stalkie_big_nohaplotig	CDS	46265155	46265295	.	+	0	Parent=FBgn0034029.1.mrna1;Target=FBgn0034029.1 679 819 +
Chr2	stalkie_big_nohaplotig	CDS	46265353	46265529	.	+	0	Parent=FBgn0034029.1.mrna1;Target=FBgn0034029.1 820 996 +
Chr2	stalkie_big_nohaplotig	CDS	46265601	46265827	.	+	0	Parent=FBgn0034029.1.mrna1;Target=FBgn0034029.1 997 1223 +
Chr2	stalkie_big_nohaplotig	CDS	46265886	46266048	.	+	1	Parent=FBgn0034029.1.mrna1;Target=FBgn0034029.1 1224 1386 +
Chr2	gffcl	locus	46267987	46269506	.	+	.	ID=RLOC_00017080;geneIDs=FBgn0050467.1.path1;transcripts=FBgn0050467.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46267987	46269506	.	+	.	ID=FBgn0050467.1.mrna1;geneID=FBgn0050467.1.path1;Name=FBgn0050467.1;Dir=sensecoverage=100.0;identity=98.9;matches=1412;mismatches=16;indels=0;unknowns=0;locus=RLOC_00017080
Chr2	stalkie_big_nohaplotig	exon	46267987	46269075	98	+	.	Parent=FBgn0050467.1.mrna1;Target=FBgn0050467.1 1 1089 +
Chr2	stalkie_big_nohaplotig	exon	46269168	46269506	99	+	.	Parent=FBgn0050467.1.mrna1;Target=FBgn0050467.1 1090 1428 +
Chr2	stalkie_big_nohaplotig	CDS	46267987	46269075	.	+	0	Parent=FBgn0050467.1.mrna1;Target=FBgn0050467.1 1 1089 +
Chr2	stalkie_big_nohaplotig	CDS	46269168	46269506	.	+	0	Parent=FBgn0050467.1.mrna1;Target=FBgn0050467.1 1090 1428 +
Chr2	gffcl	locus	46269632	46270870	.	-	.	ID=RLOC_00017081;geneIDs=FBgn0034027.2.path1;transcripts=FBgn0034027.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46269632	46270870	.	-	.	ID=FBgn0034027.2.mrna1;geneID=FBgn0034027.2.path1;Name=FBgn0034027.2;Dir=sensecoverage=100.0;identity=98.4;matches=1113;mismatches=18;indels=0;unknowns=0;locus=RLOC_00017081
Chr2	stalkie_big_nohaplotig	exon	46269632	46269984	99	-	.	Parent=FBgn0034027.2.mrna1;Target=FBgn0034027.2 779 1131 +
Chr2	stalkie_big_nohaplotig	exon	46270040	46270223	98	-	.	Parent=FBgn0034027.2.mrna1;Target=FBgn0034027.2 595 778 +
Chr2	stalkie_big_nohaplotig	exon	46270277	46270870	97	-	.	Parent=FBgn0034027.2.mrna1;Target=FBgn0034027.2 1 594 +
Chr2	stalkie_big_nohaplotig	CDS	46269632	46269984	.	-	2	Parent=FBgn0034027.2.mrna1;Target=FBgn0034027.2 779 1131 +
Chr2	stalkie_big_nohaplotig	CDS	46270040	46270223	.	-	0	Parent=FBgn0034027.2.mrna1;Target=FBgn0034027.2 595 778 +
Chr2	stalkie_big_nohaplotig	CDS	46270277	46270870	.	-	0	Parent=FBgn0034027.2.mrna1;Target=FBgn0034027.2 1 594 +
Chr2	gffcl	locus	46361627	46370876	.	+	.	ID=RLOC_00017082;geneIDs=comp112857_c0_seq1.path1,comp146659_c0_seq1.path1,comp153616_c0_seq1.path1;transcripts=comp112857_c0_seq1.mrna1,comp146659_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46361627	46370145	.	+	.	ID=comp112857_c0_seq1.mrna1;geneID=comp112857_c0_seq1.path1;Name=comp112857_c0_seq1;Dir=antisensecoverage=84.3;identity=99.8;matches=408;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017082
Chr2	stalkie_big_nohaplotig	exon	46361627	46361908	100	+	.	Parent=comp112857_c0_seq1.mrna1;Target=comp112857_c0_seq1 128 409 -
Chr2	stalkie_big_nohaplotig	exon	46362001	46362106	99	+	.	Parent=comp112857_c0_seq1.mrna1;Target=comp112857_c0_seq1 22 127 -
Chr2	stalkie_big_nohaplotig	exon	46370125	46370145	100	+	.	Parent=comp112857_c0_seq1.mrna1;Target=comp112857_c0_seq1 1 21 -
Chr2	stalkie_big_nohaplotig	CDS	46361831	46361908	.	+	0	Parent=comp112857_c0_seq1.mrna1;Target=comp112857_c0_seq1 128 205 .
Chr2	stalkie_big_nohaplotig	CDS	46362001	46362106	.	+	0	Parent=comp112857_c0_seq1.mrna1;Target=comp112857_c0_seq1 22 127 .
Chr2	stalkie_big_nohaplotig	CDS	46370125	46370144	.	+	2	Parent=comp112857_c0_seq1.mrna1;Target=comp112857_c0_seq1 2 21 .
Chr2	stalkie_big_nohaplotig	mRNA	46367732	46370147	.	+	.	ID=comp146659_c0_seq1.mrna1;geneID=comp146659_c0_seq1.path1;Name=comp146659_c0_seq1;Dir=sensecoverage=100.0;identity=98.0;matches=299;mismatches=6;indels=0;unknowns=0;locus=RLOC_00017082
Chr2	stalkie_big_nohaplotig	exon	46367732	46367961	97	+	.	Parent=comp146659_c0_seq1.mrna1;Target=comp146659_c0_seq1 1 230 +
Chr2	stalkie_big_nohaplotig	exon	46368025	46368076	100	+	.	Parent=comp146659_c0_seq1.mrna1;Target=comp146659_c0_seq1 231 282 +
Chr2	stalkie_big_nohaplotig	exon	46370125	46370147	100	+	.	Parent=comp146659_c0_seq1.mrna1;Target=comp146659_c0_seq1 283 305 +
Chr2	stalkie_big_nohaplotig	CDS	46367884	46367961	.	+	0	Parent=comp146659_c0_seq1.mrna1;Target=comp146659_c0_seq1 153 230 +
Chr2	stalkie_big_nohaplotig	CDS	46368025	46368076	.	+	0	Parent=comp146659_c0_seq1.mrna1;Target=comp146659_c0_seq1 231 282 +
Chr2	stalkie_big_nohaplotig	CDS	46370125	46370147	.	+	2	Parent=comp146659_c0_seq1.mrna1;Target=comp146659_c0_seq1 283 305 +
Chr2	gffcl	locus	46368552	46369081	.	-	.	ID=RLOC_00017083;geneIDs=comp153439_c0_seq1.path1;transcripts=comp153439_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46368552	46369081	.	-	.	ID=comp153439_c0_seq1.mrna1;geneID=comp153439_c0_seq1.path1;Name=comp153439_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.8;matches=513;mismatches=11;indels=6;unknowns=0;Target=comp153439_c0_seq1 524 1 .;CDS_Target=comp153439_c0_seq1 160 2 .;locus=RLOC_00017083
Chr2	stalkie_big_nohaplotig	exon	46368552	46369081	96	-	.	Parent=comp153439_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	46368922	46369080	.	-	0	Parent=comp153439_c0_seq1.mrna1
Chr2	gffcl	locus	46375672	46377044	.	+	.	ID=RLOC_00017084;geneIDs=comp151537_c0_seq1.path1;transcripts=comp151537_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46375672	46377044	.	+	.	ID=comp151537_c0_seq1.mrna1;geneID=comp151537_c0_seq1.path1;Name=comp151537_c0_seq1;Dir=indeterminatecoverage=99.1;identity=94.0;matches=1311;mismatches=56;indels=27;unknowns=0;Target=comp151537_c0_seq1 1388 1 .;CDS_Target=comp151537_c0_seq1 157 2 .;locus=RLOC_00017084
Chr2	stalkie_big_nohaplotig	exon	46375672	46377044	94	+	.	Parent=comp151537_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	46375673	46375828	.	+	0	Parent=comp151537_c0_seq1.mrna1
Chr2	gffcl	locus	46377295	46378925	.	-	.	ID=RLOC_00017085;geneIDs=FBgn0036956.1.path1;transcripts=FBgn0036956.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46377295	46378925	.	-	.	ID=FBgn0036956.1.mrna1;geneID=FBgn0036956.1.path1;Name=FBgn0036956.1;Dir=sensecoverage=100.0;identity=98.3;matches=1546;mismatches=18;indels=9;unknowns=0;Target=FBgn0036956.1 89 112 +;locus=RLOC_00017085
Chr2	stalkie_big_nohaplotig	exon	46377295	46377861	98	-	.	Parent=FBgn0036956.1.mrna1;Target=FBgn0036956.1 1000 1566 +
Chr2	stalkie_big_nohaplotig	exon	46377922	46378925	98	-	.	Parent=FBgn0036956.1.mrna1;Target=FBgn0036956.1 1 999 +
Chr2	stalkie_big_nohaplotig	CDS	46378809	46378832	.	-	0	Parent=FBgn0036956.1.mrna1
Chr2	gffcl	locus	46385860	46386775	.	+	.	ID=RLOC_00017086;geneIDs=FBgn0010531.1.path1;transcripts=FBgn0010531.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46385860	46386775	.	+	.	ID=FBgn0010531.1.mrna1;geneID=FBgn0010531.1.path1;Name=FBgn0010531.1;Dir=sensecoverage=100.0;identity=98.6;matches=784;mismatches=11;indels=0;unknowns=0;locus=RLOC_00017086
Chr2	stalkie_big_nohaplotig	exon	46385860	46385886	96	+	.	Parent=FBgn0010531.1.mrna1;Target=FBgn0010531.1 1 27 +
Chr2	stalkie_big_nohaplotig	exon	46385942	46386576	98	+	.	Parent=FBgn0010531.1.mrna1;Target=FBgn0010531.1 28 662 +
Chr2	stalkie_big_nohaplotig	exon	46386643	46386775	98	+	.	Parent=FBgn0010531.1.mrna1;Target=FBgn0010531.1 663 795 +
Chr2	stalkie_big_nohaplotig	CDS	46385860	46385886	.	+	0	Parent=FBgn0010531.1.mrna1;Target=FBgn0010531.1 1 27 +
Chr2	stalkie_big_nohaplotig	CDS	46385942	46386576	.	+	0	Parent=FBgn0010531.1.mrna1;Target=FBgn0010531.1 28 662 +
Chr2	stalkie_big_nohaplotig	CDS	46386643	46386775	.	+	1	Parent=FBgn0010531.1.mrna1;Target=FBgn0010531.1 663 795 +
Chr2	gffcl	locus	46395360	46396019	.	+	.	ID=RLOC_00017087;geneIDs=FBgn0034541.1.path1;transcripts=FBgn0034541.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46395360	46396019	.	+	.	ID=FBgn0034541.1.mrna1;geneID=FBgn0034541.1.path1;Name=FBgn0034541.1;Dir=sensecoverage=92.0;identity=99.7;matches=311;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017087
Chr2	stalkie_big_nohaplotig	exon	46395360	46395582	100	+	.	Parent=FBgn0034541.1.mrna1;Target=FBgn0034541.1 28 250 +
Chr2	stalkie_big_nohaplotig	exon	46395931	46396019	98	+	.	Parent=FBgn0034541.1.mrna1;Target=FBgn0034541.1 251 339 +
Chr2	stalkie_big_nohaplotig	CDS	46395360	46395582	.	+	0	Parent=FBgn0034541.1.mrna1;Target=FBgn0034541.1 28 250 +
Chr2	stalkie_big_nohaplotig	CDS	46395931	46396019	.	+	2	Parent=FBgn0034541.1.mrna1;Target=FBgn0034541.1 251 339 +
Chr2	gffcl	locus	46425567	46425980	.	+	.	ID=RLOC_00017089;geneIDs=comp94655_c0_seq1.path1;transcripts=comp94655_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46425567	46425980	.	+	.	ID=comp94655_c0_seq1.mrna1;geneID=comp94655_c0_seq1.path1;Name=comp94655_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=404;mismatches=6;indels=5;unknowns=0;Target=comp94655_c0_seq1 411 1 .;CDS_Target=comp94655_c0_seq1 113 3 .;locus=RLOC_00017089
Chr2	stalkie_big_nohaplotig	exon	46425567	46425980	97	+	.	Parent=comp94655_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	46425569	46425683	.	+	0	Parent=comp94655_c0_seq1.mrna1
Chr2	gffcl	locus	46425993	46428618	.	-	.	ID=RLOC_00017090;geneIDs=FBgn0000615.1.path1;transcripts=FBgn0000615.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46425993	46428618	.	-	.	ID=FBgn0000615.1.mrna1;geneID=FBgn0000615.1.path1;Name=FBgn0000615.1;Dir=sensecoverage=100.0;identity=99.7;matches=1457;mismatches=3;indels=1;unknowns=0;locus=RLOC_00017090
Chr2	stalkie_big_nohaplotig	exon	46425993	46426225	100	-	.	Parent=FBgn0000615.1.mrna1;Target=FBgn0000615.1 1229 1461 +
Chr2	stalkie_big_nohaplotig	exon	46426310	46427195	99	-	.	Parent=FBgn0000615.1.mrna1;Target=FBgn0000615.1 343 1228 +
Chr2	stalkie_big_nohaplotig	exon	46428172	46428324	99	-	.	Parent=FBgn0000615.1.mrna1;Target=FBgn0000615.1 190 342 +
Chr2	stalkie_big_nohaplotig	exon	46428431	46428618	99	-	.	Parent=FBgn0000615.1.mrna1;Target=FBgn0000615.1 1 189 +
Chr2	stalkie_big_nohaplotig	CDS	46425993	46426225	.	-	2	Parent=FBgn0000615.1.mrna1;Target=FBgn0000615.1 1229 1461 +
Chr2	stalkie_big_nohaplotig	CDS	46426310	46427195	.	-	0	Parent=FBgn0000615.1.mrna1;Target=FBgn0000615.1 343 1228 +
Chr2	stalkie_big_nohaplotig	CDS	46428172	46428324	.	-	0	Parent=FBgn0000615.1.mrna1;Target=FBgn0000615.1 190 342 +
Chr2	stalkie_big_nohaplotig	CDS	46428431	46428589	.	-	0	Parent=FBgn0000615.1.mrna1;Target=FBgn0000615.1 31 189 +
Chr2	gffcl	locus	46433990	46439845	.	+	.	ID=RLOC_00017091;geneIDs=FBgn0034543.1.path1;transcripts=FBgn0034543.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46433990	46439845	.	+	.	ID=FBgn0034543.1.mrna1;geneID=FBgn0034543.1.path1;Name=FBgn0034543.1;Dir=sensecoverage=100.0;identity=99.5;matches=603;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017091
Chr2	stalkie_big_nohaplotig	exon	46433990	46434236	99	+	.	Parent=FBgn0034543.1.mrna1;Target=FBgn0034543.1 1 247 +
Chr2	stalkie_big_nohaplotig	exon	46434311	46434423	100	+	.	Parent=FBgn0034543.1.mrna1;Target=FBgn0034543.1 248 360 +
Chr2	stalkie_big_nohaplotig	exon	46434481	46434631	100	+	.	Parent=FBgn0034543.1.mrna1;Target=FBgn0034543.1 361 511 +
Chr2	stalkie_big_nohaplotig	exon	46439751	46439845	98	+	.	Parent=FBgn0034543.1.mrna1;Target=FBgn0034543.1 512 606 +
Chr2	stalkie_big_nohaplotig	CDS	46433990	46434236	.	+	0	Parent=FBgn0034543.1.mrna1;Target=FBgn0034543.1 1 247 +
Chr2	stalkie_big_nohaplotig	CDS	46434311	46434423	.	+	2	Parent=FBgn0034543.1.mrna1;Target=FBgn0034543.1 248 360 +
Chr2	stalkie_big_nohaplotig	CDS	46434481	46434631	.	+	0	Parent=FBgn0034543.1.mrna1;Target=FBgn0034543.1 361 511 +
Chr2	stalkie_big_nohaplotig	CDS	46439751	46439845	.	+	2	Parent=FBgn0034543.1.mrna1;Target=FBgn0034543.1 512 606 +
Chr2	gffcl	locus	46453473	46454308	.	-	.	ID=RLOC_00017092;geneIDs=ORF2468.path1;transcripts=ORF2468.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46453473	46454308	.	-	.	ID=ORF2468.mrna1;geneID=ORF2468.path1;Name=ORF2468;Dir=indeterminatecoverage=97.8;identity=98.2;matches=821;mismatches=15;indels=0;unknowns=0;Target=ORF2468 855 20 .;CDS_Target=ORF2468 855 22 .;locus=RLOC_00017092
Chr2	stalkie_big_nohaplotig	exon	46453473	46454308	98	-	.	Parent=ORF2468.mrna1
Chr2	stalkie_big_nohaplotig	CDS	46453473	46454306	.	-	0	Parent=ORF2468.mrna1
Chr2	gffcl	locus	46561083	46638395	.	+	.	ID=RLOC_00017093;geneIDs=FBgn0040726.1.path1;transcripts=FBgn0040726.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46561083	46638395	.	+	.	ID=FBgn0040726.1.mrna1;geneID=FBgn0040726.1.path1;Name=FBgn0040726.1;Dir=sensecoverage=71.8;identity=99.5;matches=758;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017093
Chr2	stalkie_big_nohaplotig	exon	46561083	46561160	100	+	.	Parent=FBgn0040726.1.mrna1;Target=FBgn0040726.1 301 378 +
Chr2	stalkie_big_nohaplotig	exon	46564473	46564605	100	+	.	Parent=FBgn0040726.1.mrna1;Target=FBgn0040726.1 379 511 +
Chr2	stalkie_big_nohaplotig	exon	46617045	46617164	96	+	.	Parent=FBgn0040726.1.mrna1;Target=FBgn0040726.1 512 631 +
Chr2	stalkie_big_nohaplotig	exon	46618033	46618129	100	+	.	Parent=FBgn0040726.1.mrna1;Target=FBgn0040726.1 632 728 +
Chr2	stalkie_big_nohaplotig	exon	46620660	46620757	100	+	.	Parent=FBgn0040726.1.mrna1;Target=FBgn0040726.1 729 826 +
Chr2	stalkie_big_nohaplotig	exon	46638160	46638395	100	+	.	Parent=FBgn0040726.1.mrna1;Target=FBgn0040726.1 827 1062 +
Chr2	stalkie_big_nohaplotig	CDS	46561083	46561160	.	+	0	Parent=FBgn0040726.1.mrna1;Target=FBgn0040726.1 301 378 +
Chr2	stalkie_big_nohaplotig	CDS	46564473	46564605	.	+	0	Parent=FBgn0040726.1.mrna1;Target=FBgn0040726.1 379 511 +
Chr2	stalkie_big_nohaplotig	CDS	46617045	46617164	.	+	2	Parent=FBgn0040726.1.mrna1;Target=FBgn0040726.1 512 631 +
Chr2	stalkie_big_nohaplotig	CDS	46618033	46618129	.	+	2	Parent=FBgn0040726.1.mrna1;Target=FBgn0040726.1 632 728 +
Chr2	stalkie_big_nohaplotig	CDS	46620660	46620757	.	+	1	Parent=FBgn0040726.1.mrna1;Target=FBgn0040726.1 729 826 +
Chr2	stalkie_big_nohaplotig	CDS	46638160	46638395	.	+	2	Parent=FBgn0040726.1.mrna1;Target=FBgn0040726.1 827 1062 +
Chr2	gffcl	locus	46584879	46585770	.	-	.	ID=RLOC_00017094;geneIDs=comp152326_c0_seq1.path1;transcripts=comp152326_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46584879	46585770	.	-	.	ID=comp152326_c0_seq1.mrna1;geneID=comp152326_c0_seq1.path1;Name=comp152326_c0_seq1;Dir=indeterminatecoverage=99.4;identity=96.8;matches=866;mismatches=4;indels=25;unknowns=0;Target=comp152326_c0_seq1 874 2 .;CDS_Target=comp152326_c0_seq1 805 320 .;locus=RLOC_00017094
Chr2	stalkie_big_nohaplotig	exon	46584879	46585770	96	-	.	Parent=comp152326_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	46584970	46585454	.	-	0	Parent=comp152326_c0_seq1.mrna1
Chr2	gffcl	locus	46639637	46640596	.	-	.	ID=RLOC_00017095;geneIDs=comp161189_c0_seq1.path1;transcripts=comp161189_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46639637	46640596	.	-	.	ID=comp161189_c0_seq1.mrna1;geneID=comp161189_c0_seq1.path1;Name=comp161189_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.5;matches=939;mismatches=21;indels=44;unknowns=0;Target=comp161189_c0_seq1 1004 1 .;CDS_Target=comp161189_c0_seq1 242 81 .;locus=RLOC_00017095
Chr2	stalkie_big_nohaplotig	exon	46639637	46640596	93	-	.	Parent=comp161189_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	46640355	46640516	.	-	0	Parent=comp161189_c0_seq1.mrna1
Chr2	gffcl	locus	46640599	46641194	.	-	.	ID=RLOC_00017096;geneIDs=comp146833_c0_seq1.path1;transcripts=comp146833_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46640599	46641194	.	-	.	ID=comp146833_c0_seq1.mrna1;geneID=comp146833_c0_seq1.path1;Name=comp146833_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.2;matches=547;mismatches=35;indels=18;unknowns=0;Target=comp146833_c0_seq1 586 1 .;CDS_Target=comp146833_c0_seq1 163 74 .;locus=RLOC_00017096
Chr2	stalkie_big_nohaplotig	exon	46640599	46641194	91	-	.	Parent=comp146833_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	46641032	46641121	.	-	0	Parent=comp146833_c0_seq1.mrna1
Chr2	gffcl	locus	46672566	46674314	.	+	.	ID=RLOC_00017097;geneIDs=FBgn0035024.3.path1;transcripts=FBgn0035024.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46672566	46674314	.	+	.	ID=FBgn0035024.3.mrna1;geneID=FBgn0035024.3.path1;Name=FBgn0035024.3;Dir=indeterminatecoverage=100.0;identity=97.3;matches=1706;mismatches=23;indels=25;unknowns=0;Target=FBgn0035024.3 1734 1 .;locus=RLOC_00017097
Chr2	stalkie_big_nohaplotig	exon	46672566	46674314	97	+	.	Parent=FBgn0035024.3.mrna1
Chr2	stalkie_big_nohaplotig	CDS	46672566	46674314	.	+	0	Parent=FBgn0035024.3.mrna1
Chr2	gffcl	locus	46778076	46795067	.	-	.	ID=RLOC_00017098;geneIDs=FBgn0034546.1.path1;transcripts=FBgn0034546.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46778076	46795067	.	-	.	ID=FBgn0034546.1.mrna1;geneID=FBgn0034546.1.path1;Name=FBgn0034546.1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=921;mismatches=11;indels=0;unknowns=0;locus=RLOC_00017098
Chr2	stalkie_big_nohaplotig	exon	46778076	46778357	98	-	.	Parent=FBgn0034546.1.mrna1;Target=FBgn0034546.1 1188 907 .
Chr2	stalkie_big_nohaplotig	exon	46782134	46782144	90	-	.	Parent=FBgn0034546.1.mrna1;Target=FBgn0034546.1 850 840 .
Chr2	stalkie_big_nohaplotig	exon	46783073	46783086	78	-	.	Parent=FBgn0034546.1.mrna1;Target=FBgn0034546.1 839 826 .
Chr2	stalkie_big_nohaplotig	exon	46787074	46787162	100	-	.	Parent=FBgn0034546.1.mrna1;Target=FBgn0034546.1 623 535 .
Chr2	stalkie_big_nohaplotig	exon	46791083	46791128	100	-	.	Parent=FBgn0034546.1.mrna1;Target=FBgn0034546.1 534 489 .
Chr2	stalkie_big_nohaplotig	exon	46794431	46794623	98	-	.	Parent=FBgn0034546.1.mrna1;Target=FBgn0034546.1 488 296 .
Chr2	stalkie_big_nohaplotig	exon	46794701	46794946	100	-	.	Parent=FBgn0034546.1.mrna1;Target=FBgn0034546.1 295 50 .
Chr2	stalkie_big_nohaplotig	exon	46795019	46795067	100	-	.	Parent=FBgn0034546.1.mrna1;Target=FBgn0034546.1 49 1 .
Chr2	stalkie_big_nohaplotig	CDS	46778076	46778357	.	-	0	Parent=FBgn0034546.1.mrna1;Target=FBgn0034546.1 1188 907 .
Chr2	stalkie_big_nohaplotig	CDS	46782134	46782144	.	-	2	Parent=FBgn0034546.1.mrna1;Target=FBgn0034546.1 850 840 .
Chr2	stalkie_big_nohaplotig	CDS	46783073	46783086	.	-	1	Parent=FBgn0034546.1.mrna1;Target=FBgn0034546.1 839 826 .
Chr2	stalkie_big_nohaplotig	CDS	46787074	46787162	.	-	0	Parent=FBgn0034546.1.mrna1;Target=FBgn0034546.1 623 535 .
Chr2	stalkie_big_nohaplotig	CDS	46791083	46791128	.	-	1	Parent=FBgn0034546.1.mrna1;Target=FBgn0034546.1 534 489 .
Chr2	stalkie_big_nohaplotig	CDS	46794431	46794623	.	-	2	Parent=FBgn0034546.1.mrna1;Target=FBgn0034546.1 488 296 .
Chr2	stalkie_big_nohaplotig	CDS	46794701	46794946	.	-	2	Parent=FBgn0034546.1.mrna1;Target=FBgn0034546.1 295 50 .
Chr2	stalkie_big_nohaplotig	CDS	46795019	46795067	.	-	0	Parent=FBgn0034546.1.mrna1;Target=FBgn0034546.1 49 1 .
Chr2	gffcl	locus	46818384	46819160	.	+	.	ID=RLOC_00017099;geneIDs=comp130268_c2_seq1.path1;transcripts=comp130268_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46818384	46819160	.	+	.	ID=comp130268_c2_seq1.mrna1;geneID=comp130268_c2_seq1.path1;Name=comp130268_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=771;mismatches=5;indels=1;unknowns=0;Target=comp130268_c2_seq1 776 1 .;CDS_Target=comp130268_c2_seq1 497 336 .;locus=RLOC_00017099
Chr2	stalkie_big_nohaplotig	exon	46818384	46819160	99	+	.	Parent=comp130268_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	46818719	46818881	.	+	0	Parent=comp130268_c2_seq1.mrna1
Chr2	gffcl	locus	46865706	46866403	.	+	.	ID=RLOC_00017100;geneIDs=comp143448_c0_seq1.path1;transcripts=comp143448_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	46865706	46866403	.	+	.	ID=comp143448_c0_seq1.mrna1;geneID=comp143448_c0_seq1.path1;Name=comp143448_c0_seq1;Dir=indeterminatecoverage=96.9;identity=99.4;matches=694;mismatches=4;indels=0;unknowns=0;Target=comp143448_c0_seq1 698 1 .;CDS_Target=comp143448_c0_seq1 629 507 .;locus=RLOC_00017100
Chr2	stalkie_big_nohaplotig	exon	46865706	46866403	99	+	.	Parent=comp143448_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	46866212	46866334	.	+	0	Parent=comp143448_c0_seq1.mrna1
Chr2	gffcl	locus	46975655	46976284	.	-	.	ID=RLOC_00017101;geneIDs=comp116902_c0_seq1.path2;transcripts=comp116902_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	46975655	46976284	.	-	.	ID=comp116902_c0_seq1.mrna2;geneID=comp116902_c0_seq1.path2;Name=comp116902_c0_seq1;Dir=indeterminatecoverage=86.7;identity=99.8;matches=629;mismatches=1;indels=0;unknowns=0;Target=comp116902_c0_seq1 727 98 .;CDS_Target=comp116902_c0_seq1 552 367 .;locus=RLOC_00017101
Chr2	stalkie_big_nohaplotig	exon	46975655	46976284	99	-	.	Parent=comp116902_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	46975830	46976015	.	-	0	Parent=comp116902_c0_seq1.mrna2
Chr2	gffcl	locus	47019553	47020010	.	+	.	ID=RLOC_00017102;geneIDs=comp632161_c0_seq1.path2;transcripts=comp632161_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	47019553	47020010	.	+	.	ID=comp632161_c0_seq1.mrna2;geneID=comp632161_c0_seq1.path2;Name=comp632161_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=458;mismatches=0;indels=0;unknowns=0;Target=comp632161_c0_seq1 458 1 .;CDS_Target=comp632161_c0_seq1 154 2 .;locus=RLOC_00017102
Chr2	stalkie_big_nohaplotig	exon	47019553	47020010	100	+	.	Parent=comp632161_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	47019554	47019706	.	+	0	Parent=comp632161_c0_seq1.mrna2
Chr2	gffcl	locus	47135707	47136426	.	-	.	ID=RLOC_00017104;geneIDs=comp116114_c0_seq1.path1;transcripts=comp116114_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47135707	47136426	.	-	.	ID=comp116114_c0_seq1.mrna1;geneID=comp116114_c0_seq1.path1;Name=comp116114_c0_seq1;Dir=indeterminatecoverage=99.7;identity=94.6;matches=682;mismatches=38;indels=1;unknowns=0;Target=comp116114_c0_seq1 722 2 .;CDS_Target=comp116114_c0_seq1 702 568 .;locus=RLOC_00017104
Chr2	stalkie_big_nohaplotig	exon	47135707	47136426	94	-	.	Parent=comp116114_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	47135727	47135861	.	-	0	Parent=comp116114_c0_seq1.mrna1
Chr2	gffcl	locus	47153003	47153389	.	+	.	ID=RLOC_00017105;geneIDs=comp112790_c0_seq1.path2;transcripts=comp112790_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	47153003	47153389	.	+	.	ID=comp112790_c0_seq1.mrna2;geneID=comp112790_c0_seq1.path2;Name=comp112790_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=386;mismatches=1;indels=0;unknowns=0;Target=comp112790_c0_seq1 387 1 .;CDS_Target=comp112790_c0_seq1 287 177 .;locus=RLOC_00017105
Chr2	stalkie_big_nohaplotig	exon	47153003	47153389	99	+	.	Parent=comp112790_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	47153179	47153289	.	+	0	Parent=comp112790_c0_seq1.mrna2
Chr2	gffcl	locus	47160116	49126013	.	+	.	ID=RLOC_00017106;geneIDs=comp135883_c0_seq1.path2;transcripts=comp135883_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	47160116	49126013	.	+	.	ID=comp135883_c0_seq1.mrna2;geneID=comp135883_c0_seq1.path2;Name=comp135883_c0_seq1;Dir=sensecoverage=95.8;identity=99.7;matches=593;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017106
Chr2	stalkie_big_nohaplotig	exon	47160116	47160341	99	+	.	Parent=comp135883_c0_seq1.mrna2;Target=comp135883_c0_seq1 6 231 +
Chr2	stalkie_big_nohaplotig	exon	47160408	47160736	99	+	.	Parent=comp135883_c0_seq1.mrna2;Target=comp135883_c0_seq1 232 560 +
Chr2	stalkie_big_nohaplotig	exon	49095179	49095182	100	+	.	Parent=comp135883_c0_seq1.mrna2;Target=comp135883_c0_seq1 561 564 +
Chr2	stalkie_big_nohaplotig	exon	49100697	49100699	100	+	.	Parent=comp135883_c0_seq1.mrna2;Target=comp135883_c0_seq1 565 567 +
Chr2	stalkie_big_nohaplotig	exon	49108357	49108361	100	+	.	Parent=comp135883_c0_seq1.mrna2;Target=comp135883_c0_seq1 568 572 +
Chr2	stalkie_big_nohaplotig	exon	49114054	49114056	100	+	.	Parent=comp135883_c0_seq1.mrna2;Target=comp135883_c0_seq1 573 575 +
Chr2	stalkie_big_nohaplotig	exon	49118120	49118122	100	+	.	Parent=comp135883_c0_seq1.mrna2;Target=comp135883_c0_seq1 576 578 +
Chr2	stalkie_big_nohaplotig	exon	49120471	49120475	100	+	.	Parent=comp135883_c0_seq1.mrna2;Target=comp135883_c0_seq1 579 583 +
Chr2	stalkie_big_nohaplotig	exon	49122684	49122698	100	+	.	Parent=comp135883_c0_seq1.mrna2;Target=comp135883_c0_seq1 584 598 +
Chr2	stalkie_big_nohaplotig	exon	49126012	49126013	100	+	.	Parent=comp135883_c0_seq1.mrna2;Target=comp135883_c0_seq1 599 600 +
Chr2	stalkie_big_nohaplotig	CDS	47160332	47160341	.	+	0	Parent=comp135883_c0_seq1.mrna2;Target=comp135883_c0_seq1 222 231 +
Chr2	stalkie_big_nohaplotig	CDS	47160408	47160691	.	+	2	Parent=comp135883_c0_seq1.mrna2;Target=comp135883_c0_seq1 232 515 +
Chr2	gffcl	locus	47165760	47166217	.	+	.	ID=RLOC_00017107;geneIDs=comp58411_c0_seq1.path1;transcripts=comp58411_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47165760	47166217	.	+	.	ID=comp58411_c0_seq1.mrna1;geneID=comp58411_c0_seq1.path1;Name=comp58411_c0_seq1;Dir=antisensecoverage=89.4;identity=97.7;matches=377;mismatches=9;indels=0;unknowns=0;locus=RLOC_00017107
Chr2	stalkie_big_nohaplotig	exon	47165760	47165812	100	+	.	Parent=comp58411_c0_seq1.mrna1;Target=comp58411_c0_seq1 351 403 -
Chr2	stalkie_big_nohaplotig	exon	47165885	47166217	97	+	.	Parent=comp58411_c0_seq1.mrna1;Target=comp58411_c0_seq1 18 350 -
Chr2	stalkie_big_nohaplotig	CDS	47165761	47165812	.	+	0	Parent=comp58411_c0_seq1.mrna1;Target=comp58411_c0_seq1 351 402 .
Chr2	stalkie_big_nohaplotig	CDS	47165885	47166138	.	+	2	Parent=comp58411_c0_seq1.mrna1;Target=comp58411_c0_seq1 97 350 .
Chr2	gffcl	locus	47189886	47190109	.	+	.	ID=RLOC_00017108;geneIDs=comp116714_c0_seq1.path2;transcripts=comp116714_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	47189886	47190109	.	+	.	ID=comp116714_c0_seq1.mrna2;geneID=comp116714_c0_seq1.path2;Name=comp116714_c0_seq1;Dir=indeterminatecoverage=96.9;identity=84.4;matches=190;mismatches=27;indels=8;unknowns=0;Target=comp116714_c0_seq1 225 8 .;CDS_Target=comp116714_c0_seq1 33 10 .;locus=RLOC_00017108
Chr2	stalkie_big_nohaplotig	exon	47189886	47190109	84	+	.	Parent=comp116714_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	47189888	47189911	.	+	0	Parent=comp116714_c0_seq1.mrna2
Chr2	gffcl	locus	47222461	47224631	.	-	.	ID=RLOC_00017109;geneIDs=FBgn0016984.1.path1;transcripts=FBgn0016984.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47222461	47224631	.	-	.	ID=FBgn0016984.1.mrna1;geneID=FBgn0016984.1.path1;Name=FBgn0016984.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=2154;mismatches=17;indels=1;unknowns=0;Target=FBgn0016984.1 2172 1 .;CDS_Target=FBgn0016984.1 77 3 .;locus=RLOC_00017109
Chr2	stalkie_big_nohaplotig	exon	47222461	47224631	99	-	.	Parent=FBgn0016984.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	47224556	47224629	.	-	0	Parent=FBgn0016984.1.mrna1
Chr2	gffcl	locus	47291024	47291333	.	-	.	ID=RLOC_00017110;geneIDs=comp114540_c1_seq1.path1;transcripts=comp114540_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47291024	47291333	.	-	.	ID=comp114540_c1_seq1.mrna1;geneID=comp114540_c1_seq1.path1;Name=comp114540_c1_seq1;Dir=indeterminatecoverage=89.7;identity=79.7;matches=279;mismatches=29;indels=42;unknowns=0;Target=comp114540_c1_seq1 388 41 .;CDS_Target=comp114540_c1_seq1 387 271 .;locus=RLOC_00017110
Chr2	stalkie_big_nohaplotig	exon	47291024	47291333	79	-	.	Parent=comp114540_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	47291025	47291141	.	-	0	Parent=comp114540_c1_seq1.mrna1
Chr2	gffcl	locus	47324838	47329232	.	+	.	ID=RLOC_00017111;geneIDs=ORF779.path1,comp153523_c1_seq1.path1;transcripts=ORF779.mrna1,comp153523_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47324838	47329232	.	+	.	ID=ORF779.mrna1;geneID=ORF779.path1;Name=ORF779;Dir=sensecoverage=100.0;identity=99.0;matches=1425;mismatches=12;indels=3;unknowns=0;locus=RLOC_00017111
Chr2	stalkie_big_nohaplotig	exon	47324838	47324995	99	+	.	Parent=ORF779.mrna1;Target=ORF779 1 158 +
Chr2	stalkie_big_nohaplotig	exon	47326802	47326885	100	+	.	Parent=ORF779.mrna1;Target=ORF779 159 242 +
Chr2	stalkie_big_nohaplotig	exon	47327160	47327243	98	+	.	Parent=ORF779.mrna1;Target=ORF779 243 326 +
Chr2	stalkie_big_nohaplotig	exon	47327312	47327500	99	+	.	Parent=ORF779.mrna1;Target=ORF779 327 515 +
Chr2	stalkie_big_nohaplotig	exon	47327561	47327598	100	+	.	Parent=ORF779.mrna1;Target=ORF779 516 553 +
Chr2	stalkie_big_nohaplotig	exon	47327669	47327713	100	+	.	Parent=ORF779.mrna1;Target=ORF779 554 598 +
Chr2	stalkie_big_nohaplotig	exon	47327780	47328013	99	+	.	Parent=ORF779.mrna1;Target=ORF779 599 832 +
Chr2	stalkie_big_nohaplotig	exon	47328069	47328131	100	+	.	Parent=ORF779.mrna1;Target=ORF779 833 895 +
Chr2	stalkie_big_nohaplotig	exon	47328310	47328366	94	+	.	Parent=ORF779.mrna1;Target=ORF779 896 952 +
Chr2	stalkie_big_nohaplotig	exon	47328439	47328566	99	+	.	Parent=ORF779.mrna1;Target=ORF779 953 1080 +
Chr2	stalkie_big_nohaplotig	exon	47328873	47329232	98	+	.	Parent=ORF779.mrna1;Target=ORF779 1081 1437 +
Chr2	stalkie_big_nohaplotig	CDS	47324838	47324995	.	+	0	Parent=ORF779.mrna1;Target=ORF779 1 158 +
Chr2	stalkie_big_nohaplotig	CDS	47326802	47326885	.	+	1	Parent=ORF779.mrna1;Target=ORF779 159 242 +
Chr2	stalkie_big_nohaplotig	CDS	47327160	47327243	.	+	1	Parent=ORF779.mrna1;Target=ORF779 243 326 +
Chr2	stalkie_big_nohaplotig	CDS	47327312	47327500	.	+	1	Parent=ORF779.mrna1;Target=ORF779 327 515 +
Chr2	stalkie_big_nohaplotig	CDS	47327561	47327598	.	+	1	Parent=ORF779.mrna1;Target=ORF779 516 553 +
Chr2	stalkie_big_nohaplotig	CDS	47327669	47327713	.	+	2	Parent=ORF779.mrna1;Target=ORF779 554 598 +
Chr2	stalkie_big_nohaplotig	CDS	47327780	47328013	.	+	2	Parent=ORF779.mrna1;Target=ORF779 599 832 +
Chr2	stalkie_big_nohaplotig	CDS	47328069	47328131	.	+	2	Parent=ORF779.mrna1;Target=ORF779 833 895 +
Chr2	stalkie_big_nohaplotig	CDS	47328310	47328366	.	+	2	Parent=ORF779.mrna1;Target=ORF779 896 952 +
Chr2	stalkie_big_nohaplotig	CDS	47328439	47328566	.	+	2	Parent=ORF779.mrna1;Target=ORF779 953 1080 +
Chr2	stalkie_big_nohaplotig	CDS	47328873	47329232	.	+	0	Parent=ORF779.mrna1;Target=ORF779 1081 1437 +
Chr2	stalkie_big_nohaplotig	mRNA	47325553	47326822	.	+	.	ID=comp153523_c1_seq1.mrna1;geneID=comp153523_c1_seq1.path1;Name=comp153523_c1_seq1;Dir=indeterminatecoverage=100.0;identity=88.9;matches=520;mismatches=23;indels=42;unknowns=0;Target=comp153523_c1_seq1 97 2 .;locus=RLOC_00017111
Chr2	stalkie_big_nohaplotig	exon	47325553	47325786	96	+	.	Parent=comp153523_c1_seq1.mrna1;Target=comp153523_c1_seq1 234 1 .
Chr2	stalkie_big_nohaplotig	exon	47325857	47326144	83	+	.	Parent=comp153523_c1_seq1.mrna1;Target=comp153523_c1_seq1 564 235 .
Chr2	stalkie_big_nohaplotig	exon	47326802	47326822	100	+	.	Parent=comp153523_c1_seq1.mrna1;Target=comp153523_c1_seq1 585 565 .
Chr2	stalkie_big_nohaplotig	CDS	47325554	47325649	.	+	0	Parent=comp153523_c1_seq1.mrna1
Chr2	gffcl	locus	47377819	47378545	.	-	.	ID=RLOC_00017113;geneIDs=comp146570_c1_seq1.path1;transcripts=comp146570_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47377819	47378545	.	-	.	ID=comp146570_c1_seq1.mrna1;geneID=comp146570_c1_seq1.path1;Name=comp146570_c1_seq1;Dir=sensecoverage=99.5;identity=98.1;matches=627;mismatches=3;indels=9;unknowns=0;Target=comp146570_c1_seq1 4 108 +;locus=RLOC_00017113
Chr2	stalkie_big_nohaplotig	exon	47377819	47378069	100	-	.	Parent=comp146570_c1_seq1.mrna1;Target=comp146570_c1_seq1 387 637 +
Chr2	stalkie_big_nohaplotig	exon	47378164	47378545	96	-	.	Parent=comp146570_c1_seq1.mrna1;Target=comp146570_c1_seq1 2 386 +
Chr2	stalkie_big_nohaplotig	CDS	47378439	47378543	.	-	0	Parent=comp146570_c1_seq1.mrna1
Chr2	gffcl	locus	47378604	47379465	.	-	.	ID=RLOC_00017114;geneIDs=comp159515_c0_seq1.path1;transcripts=comp159515_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47378604	47379465	.	-	.	ID=comp159515_c0_seq1.mrna1;geneID=comp159515_c0_seq1.path1;Name=comp159515_c0_seq1;Dir=indeterminatecoverage=97.4;identity=91.9;matches=817;mismatches=42;indels=30;unknowns=0;Target=comp159515_c0_seq1 896 11 .;CDS_Target=comp159515_c0_seq1 719 615 .;locus=RLOC_00017114
Chr2	stalkie_big_nohaplotig	exon	47378604	47379465	91	-	.	Parent=comp159515_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	47378781	47378886	.	-	0	Parent=comp159515_c0_seq1.mrna1
Chr2	gffcl	locus	47410722	47439544	.	-	.	ID=RLOC_00017115;geneIDs=FBgn0020617.path1;transcripts=FBgn0020617.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47410722	47439544	.	-	.	ID=FBgn0020617.mrna1;geneID=FBgn0020617.path1;Name=FBgn0020617;Dir=sensecoverage=100.0;identity=99.2;matches=1512;mismatches=12;indels=0;unknowns=0;locus=RLOC_00017115
Chr2	stalkie_big_nohaplotig	exon	47410722	47411773	99	-	.	Parent=FBgn0020617.mrna1;Target=FBgn0020617 473 1524 +
Chr2	stalkie_big_nohaplotig	exon	47431459	47431578	98	-	.	Parent=FBgn0020617.mrna1;Target=FBgn0020617 353 472 +
Chr2	stalkie_big_nohaplotig	exon	47439193	47439544	99	-	.	Parent=FBgn0020617.mrna1;Target=FBgn0020617 1 352 +
Chr2	stalkie_big_nohaplotig	CDS	47410722	47411773	.	-	2	Parent=FBgn0020617.mrna1;Target=FBgn0020617 473 1524 +
Chr2	stalkie_big_nohaplotig	CDS	47431459	47431578	.	-	2	Parent=FBgn0020617.mrna1;Target=FBgn0020617 353 472 +
Chr2	stalkie_big_nohaplotig	CDS	47439193	47439544	.	-	0	Parent=FBgn0020617.mrna1;Target=FBgn0020617 1 352 +
Chr2	gffcl	locus	47503024	47503287	.	+	.	ID=RLOC_00017116;geneIDs=FBgn0000044.path1;transcripts=FBgn0000044.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47503024	47503287	.	+	.	ID=FBgn0000044.mrna1;geneID=FBgn0000044.path1;Name=FBgn0000044;Dir=indeterminatecoverage=100.0;identity=99.6;matches=263;mismatches=1;indels=0;unknowns=0;Target=FBgn0000044 264 1 .;locus=RLOC_00017116
Chr2	stalkie_big_nohaplotig	exon	47503024	47503287	99	+	.	Parent=FBgn0000044.mrna1
Chr2	stalkie_big_nohaplotig	CDS	47503024	47503287	.	+	0	Parent=FBgn0000044.mrna1
Chr2	gffcl	locus	47508301	47508696	.	+	.	ID=RLOC_00017117;geneIDs=comp58294_c0_seq1.path1;transcripts=comp58294_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47508301	47508696	.	+	.	ID=comp58294_c0_seq1.mrna1;geneID=comp58294_c0_seq1.path1;Name=comp58294_c0_seq1;Dir=indeterminatecoverage=89.4;identity=100.0;matches=396;mismatches=0;indels=0;unknowns=0;Target=comp58294_c0_seq1 425 30 .;CDS_Target=comp58294_c0_seq1 272 30 .;locus=RLOC_00017117
Chr2	stalkie_big_nohaplotig	exon	47508301	47508696	100	+	.	Parent=comp58294_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	47508301	47508543	.	+	0	Parent=comp58294_c0_seq1.mrna1
Chr2	gffcl	locus	47542256	47553068	.	-	.	ID=RLOC_00017118;geneIDs=FBgn0008636.1.path1;transcripts=FBgn0008636.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47542256	47553068	.	-	.	ID=FBgn0008636.1.mrna1;geneID=FBgn0008636.1.path1;Name=FBgn0008636.1;Dir=sensecoverage=100.0;identity=99.3;matches=879;mismatches=6;indels=0;unknowns=0;locus=RLOC_00017118
Chr2	stalkie_big_nohaplotig	exon	47542256	47542689	99	-	.	Parent=FBgn0008636.1.mrna1;Target=FBgn0008636.1 452 885 +
Chr2	stalkie_big_nohaplotig	exon	47545372	47545459	98	-	.	Parent=FBgn0008636.1.mrna1;Target=FBgn0008636.1 364 451 +
Chr2	stalkie_big_nohaplotig	exon	47552523	47552652	100	-	.	Parent=FBgn0008636.1.mrna1;Target=FBgn0008636.1 234 363 +
Chr2	stalkie_big_nohaplotig	exon	47552836	47553068	99	-	.	Parent=FBgn0008636.1.mrna1;Target=FBgn0008636.1 1 233 +
Chr2	stalkie_big_nohaplotig	CDS	47542256	47542689	.	-	2	Parent=FBgn0008636.1.mrna1;Target=FBgn0008636.1 452 885 +
Chr2	stalkie_big_nohaplotig	CDS	47545372	47545459	.	-	0	Parent=FBgn0008636.1.mrna1;Target=FBgn0008636.1 364 451 +
Chr2	stalkie_big_nohaplotig	CDS	47552523	47552652	.	-	1	Parent=FBgn0008636.1.mrna1;Target=FBgn0008636.1 234 363 +
Chr2	stalkie_big_nohaplotig	CDS	47552836	47553068	.	-	0	Parent=FBgn0008636.1.mrna1;Target=FBgn0008636.1 1 233 +
Chr2	gffcl	locus	47602155	47604625	.	-	.	ID=RLOC_00017119;geneIDs=FBgn0034563.1.path1;transcripts=FBgn0034563.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47602155	47604625	.	-	.	ID=FBgn0034563.1.mrna1;geneID=FBgn0034563.1.path1;Name=FBgn0034563.1;Dir=sensecoverage=100.0;identity=99.7;matches=377;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017119
Chr2	stalkie_big_nohaplotig	exon	47602155	47602298	100	-	.	Parent=FBgn0034563.1.mrna1;Target=FBgn0034563.1 235 378 +
Chr2	stalkie_big_nohaplotig	exon	47602464	47602634	100	-	.	Parent=FBgn0034563.1.mrna1;Target=FBgn0034563.1 64 234 +
Chr2	stalkie_big_nohaplotig	exon	47604563	47604625	98	-	.	Parent=FBgn0034563.1.mrna1;Target=FBgn0034563.1 1 63 +
Chr2	stalkie_big_nohaplotig	CDS	47602155	47602298	.	-	0	Parent=FBgn0034563.1.mrna1;Target=FBgn0034563.1 235 378 +
Chr2	stalkie_big_nohaplotig	CDS	47602464	47602634	.	-	0	Parent=FBgn0034563.1.mrna1;Target=FBgn0034563.1 64 234 +
Chr2	stalkie_big_nohaplotig	CDS	47604563	47604625	.	-	0	Parent=FBgn0034563.1.mrna1;Target=FBgn0034563.1 1 63 +
Chr2	gffcl	locus	47656373	47669623	.	+	.	ID=RLOC_00017120;geneIDs=FBgn0050295.1.path1,comp157686_c0_seq1.path1;transcripts=FBgn0050295.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47656373	47669623	.	+	.	ID=FBgn0050295.1.mrna1;geneID=FBgn0050295.1.path1;Name=FBgn0050295.1;Dir=sensecoverage=100.0;identity=99.6;matches=1665;mismatches=6;indels=0;unknowns=0;locus=RLOC_00017120
Chr2	stalkie_big_nohaplotig	exon	47656373	47656931	100	+	.	Parent=FBgn0050295.1.mrna1;Target=FBgn0050295.1 1 559 +
Chr2	stalkie_big_nohaplotig	exon	47657227	47657379	100	+	.	Parent=FBgn0050295.1.mrna1;Target=FBgn0050295.1 560 712 +
Chr2	stalkie_big_nohaplotig	exon	47660302	47660402	100	+	.	Parent=FBgn0050295.1.mrna1;Target=FBgn0050295.1 713 813 +
Chr2	stalkie_big_nohaplotig	exon	47663870	47664136	98	+	.	Parent=FBgn0050295.1.mrna1;Target=FBgn0050295.1 814 1080 +
Chr2	stalkie_big_nohaplotig	exon	47664431	47664489	98	+	.	Parent=FBgn0050295.1.mrna1;Target=FBgn0050295.1 1081 1139 +
Chr2	stalkie_big_nohaplotig	exon	47667243	47667389	100	+	.	Parent=FBgn0050295.1.mrna1;Target=FBgn0050295.1 1140 1286 +
Chr2	stalkie_big_nohaplotig	exon	47667707	47668001	99	+	.	Parent=FBgn0050295.1.mrna1;Target=FBgn0050295.1 1287 1581 +
Chr2	stalkie_big_nohaplotig	exon	47669534	47669623	98	+	.	Parent=FBgn0050295.1.mrna1;Target=FBgn0050295.1 1582 1671 +
Chr2	stalkie_big_nohaplotig	CDS	47656373	47656931	.	+	0	Parent=FBgn0050295.1.mrna1;Target=FBgn0050295.1 1 559 +
Chr2	stalkie_big_nohaplotig	CDS	47657227	47657379	.	+	2	Parent=FBgn0050295.1.mrna1;Target=FBgn0050295.1 560 712 +
Chr2	stalkie_big_nohaplotig	CDS	47660302	47660402	.	+	2	Parent=FBgn0050295.1.mrna1;Target=FBgn0050295.1 713 813 +
Chr2	stalkie_big_nohaplotig	CDS	47663870	47664136	.	+	0	Parent=FBgn0050295.1.mrna1;Target=FBgn0050295.1 814 1080 +
Chr2	stalkie_big_nohaplotig	CDS	47664431	47664489	.	+	0	Parent=FBgn0050295.1.mrna1;Target=FBgn0050295.1 1081 1139 +
Chr2	stalkie_big_nohaplotig	CDS	47667243	47667389	.	+	1	Parent=FBgn0050295.1.mrna1;Target=FBgn0050295.1 1140 1286 +
Chr2	stalkie_big_nohaplotig	CDS	47667707	47668001	.	+	1	Parent=FBgn0050295.1.mrna1;Target=FBgn0050295.1 1287 1581 +
Chr2	stalkie_big_nohaplotig	CDS	47669534	47669623	.	+	0	Parent=FBgn0050295.1.mrna1;Target=FBgn0050295.1 1582 1671 +
Chr2	gffcl	locus	47757716	47776572	.	+	.	ID=RLOC_00017122;geneIDs=FBgn0015524.1.path1;transcripts=FBgn0015524.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47757716	47776572	.	+	.	ID=FBgn0015524.1.mrna1;geneID=FBgn0015524.1.path1;Name=FBgn0015524.1;Dir=sensecoverage=34.8;identity=99.5;matches=442;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017122
Chr2	stalkie_big_nohaplotig	exon	47757716	47757824	100	+	.	Parent=FBgn0015524.1.mrna1;Target=FBgn0015524.1 1 109 +
Chr2	stalkie_big_nohaplotig	exon	47775766	47775965	99	+	.	Parent=FBgn0015524.1.mrna1;Target=FBgn0015524.1 110 309 +
Chr2	stalkie_big_nohaplotig	exon	47776438	47776572	100	+	.	Parent=FBgn0015524.1.mrna1;Target=FBgn0015524.1 310 444 +
Chr2	stalkie_big_nohaplotig	CDS	47757716	47757824	.	+	0	Parent=FBgn0015524.1.mrna1;Target=FBgn0015524.1 1 109 +
Chr2	stalkie_big_nohaplotig	CDS	47775766	47775965	.	+	2	Parent=FBgn0015524.1.mrna1;Target=FBgn0015524.1 110 309 +
Chr2	stalkie_big_nohaplotig	CDS	47776438	47776572	.	+	0	Parent=FBgn0015524.1.mrna1;Target=FBgn0015524.1 310 444 +
Chr2	gffcl	locus	47798740	47809101	.	-	.	ID=RLOC_00017123;geneIDs=FBgn0015524.1.path2;transcripts=FBgn0015524.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	47798740	47809101	.	-	.	ID=FBgn0015524.1.mrna2;geneID=FBgn0015524.1.path2;Name=FBgn0015524.1;Dir=sensecoverage=65.2;identity=99.9;matches=830;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017123
Chr2	stalkie_big_nohaplotig	exon	47798740	47799081	100	-	.	Parent=FBgn0015524.1.mrna2;Target=FBgn0015524.1 934 1275 +
Chr2	stalkie_big_nohaplotig	exon	47805153	47805310	100	-	.	Parent=FBgn0015524.1.mrna2;Target=FBgn0015524.1 776 933 +
Chr2	stalkie_big_nohaplotig	exon	47806070	47806195	99	-	.	Parent=FBgn0015524.1.mrna2;Target=FBgn0015524.1 650 775 +
Chr2	stalkie_big_nohaplotig	exon	47808897	47809101	100	-	.	Parent=FBgn0015524.1.mrna2;Target=FBgn0015524.1 445 649 +
Chr2	stalkie_big_nohaplotig	CDS	47798740	47799081	.	-	0	Parent=FBgn0015524.1.mrna2;Target=FBgn0015524.1 934 1275 +
Chr2	stalkie_big_nohaplotig	CDS	47805153	47805310	.	-	2	Parent=FBgn0015524.1.mrna2;Target=FBgn0015524.1 776 933 +
Chr2	stalkie_big_nohaplotig	CDS	47806070	47806195	.	-	2	Parent=FBgn0015524.1.mrna2;Target=FBgn0015524.1 650 775 +
Chr2	stalkie_big_nohaplotig	CDS	47808897	47809101	.	-	0	Parent=FBgn0015524.1.mrna2;Target=FBgn0015524.1 445 649 +
Chr2	gffcl	locus	47835026	47837242	.	+	.	ID=RLOC_00017124;geneIDs=FBgn0034564.1.path1;transcripts=FBgn0034564.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47835026	47837242	.	+	.	ID=FBgn0034564.1.mrna1;geneID=FBgn0034564.1.path1;Name=FBgn0034564.1;Dir=sensecoverage=100.0;identity=97.7;matches=252;mismatches=6;indels=0;unknowns=0;locus=RLOC_00017124
Chr2	stalkie_big_nohaplotig	exon	47835026	47835137	95	+	.	Parent=FBgn0034564.1.mrna1;Target=FBgn0034564.1 1 112 +
Chr2	stalkie_big_nohaplotig	exon	47837097	47837242	99	+	.	Parent=FBgn0034564.1.mrna1;Target=FBgn0034564.1 113 258 +
Chr2	stalkie_big_nohaplotig	CDS	47835026	47835137	.	+	0	Parent=FBgn0034564.1.mrna1;Target=FBgn0034564.1 1 112 +
Chr2	stalkie_big_nohaplotig	CDS	47837097	47837242	.	+	2	Parent=FBgn0034564.1.mrna1;Target=FBgn0034564.1 113 258 +
Chr2	gffcl	locus	47838606	47839659	.	+	.	ID=RLOC_00017125;geneIDs=comp157355_c0_seq1.path1;transcripts=comp157355_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47838606	47839659	.	+	.	ID=comp157355_c0_seq1.mrna1;geneID=comp157355_c0_seq1.path1;Name=comp157355_c0_seq1;Dir=indeterminatecoverage=85.4;identity=89.7;matches=936;mismatches=57;indels=50;unknowns=0;Target=comp157355_c0_seq1 845 648 .;locus=RLOC_00017125
Chr2	stalkie_big_nohaplotig	exon	47838606	47838941	94	+	.	Parent=comp157355_c0_seq1.mrna1;Target=comp157355_c0_seq1 363 26 .
Chr2	stalkie_big_nohaplotig	exon	47838958	47839659	87	+	.	Parent=comp157355_c0_seq1.mrna1;Target=comp157355_c0_seq1 1023 364 .
Chr2	stalkie_big_nohaplotig	CDS	47839239	47839436	.	+	0	Parent=comp157355_c0_seq1.mrna1
Chr2	gffcl	locus	47840473	47843054	.	-	.	ID=RLOC_00017126;geneIDs=FBgn0086656.1.path1;transcripts=FBgn0086656.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47840473	47843054	.	-	.	ID=FBgn0086656.1.mrna1;geneID=FBgn0086656.1.path1;Name=FBgn0086656.1;Dir=sensecoverage=100.0;identity=99.2;matches=649;mismatches=4;indels=1;unknowns=0;locus=RLOC_00017126
Chr2	stalkie_big_nohaplotig	exon	47840473	47840659	98	-	.	Parent=FBgn0086656.1.mrna1;Target=FBgn0086656.1 467 654 +
Chr2	stalkie_big_nohaplotig	exon	47840723	47840820	97	-	.	Parent=FBgn0086656.1.mrna1;Target=FBgn0086656.1 369 466 +
Chr2	stalkie_big_nohaplotig	exon	47842398	47842575	100	-	.	Parent=FBgn0086656.1.mrna1;Target=FBgn0086656.1 191 368 +
Chr2	stalkie_big_nohaplotig	exon	47842865	47843054	99	-	.	Parent=FBgn0086656.1.mrna1;Target=FBgn0086656.1 1 190 +
Chr2	stalkie_big_nohaplotig	CDS	47840473	47840659	.	-	2	Parent=FBgn0086656.1.mrna1;Target=FBgn0086656.1 467 654 +
Chr2	stalkie_big_nohaplotig	CDS	47840723	47840820	.	-	1	Parent=FBgn0086656.1.mrna1;Target=FBgn0086656.1 369 466 +
Chr2	stalkie_big_nohaplotig	CDS	47842398	47842575	.	-	2	Parent=FBgn0086656.1.mrna1;Target=FBgn0086656.1 191 368 +
Chr2	stalkie_big_nohaplotig	CDS	47842865	47843054	.	-	0	Parent=FBgn0086656.1.mrna1;Target=FBgn0086656.1 1 190 +
Chr2	gffcl	locus	47843553	47844473	.	+	.	ID=RLOC_00017127;geneIDs=FBgn0050342.1.path1;transcripts=FBgn0050342.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47843553	47844473	.	+	.	ID=FBgn0050342.1.mrna1;geneID=FBgn0050342.1.path1;Name=FBgn0050342.1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=911;mismatches=10;indels=0;unknowns=0;Target=FBgn0050342.1 921 1 .;locus=RLOC_00017127
Chr2	stalkie_big_nohaplotig	exon	47843553	47844473	98	+	.	Parent=FBgn0050342.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	47843553	47844473	.	+	0	Parent=FBgn0050342.1.mrna1
Chr2	gffcl	locus	47846625	47852854	.	+	.	ID=RLOC_00017128;geneIDs=FBgn0050344.3.path1;transcripts=FBgn0050344.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47846625	47852854	.	+	.	ID=FBgn0050344.3.mrna1;geneID=FBgn0050344.3.path1;Name=FBgn0050344.3;Dir=sensecoverage=100.0;identity=98.9;matches=1510;mismatches=11;indels=6;unknowns=0;locus=RLOC_00017128
Chr2	stalkie_big_nohaplotig	exon	47846625	47846835	96	+	.	Parent=FBgn0050344.3.mrna1;Target=FBgn0050344.3 1 205 +
Chr2	stalkie_big_nohaplotig	exon	47846914	47847026	100	+	.	Parent=FBgn0050344.3.mrna1;Target=FBgn0050344.3 206 318 +
Chr2	stalkie_big_nohaplotig	exon	47850335	47850485	100	+	.	Parent=FBgn0050344.3.mrna1;Target=FBgn0050344.3 319 469 +
Chr2	stalkie_big_nohaplotig	exon	47850551	47850734	98	+	.	Parent=FBgn0050344.3.mrna1;Target=FBgn0050344.3 470 653 +
Chr2	stalkie_big_nohaplotig	exon	47850819	47851005	98	+	.	Parent=FBgn0050344.3.mrna1;Target=FBgn0050344.3 654 840 +
Chr2	stalkie_big_nohaplotig	exon	47851065	47851200	99	+	.	Parent=FBgn0050344.3.mrna1;Target=FBgn0050344.3 841 976 +
Chr2	stalkie_big_nohaplotig	exon	47851260	47851396	99	+	.	Parent=FBgn0050344.3.mrna1;Target=FBgn0050344.3 977 1113 +
Chr2	stalkie_big_nohaplotig	exon	47852317	47852506	98	+	.	Parent=FBgn0050344.3.mrna1;Target=FBgn0050344.3 1114 1303 +
Chr2	stalkie_big_nohaplotig	exon	47852576	47852732	98	+	.	Parent=FBgn0050344.3.mrna1;Target=FBgn0050344.3 1304 1460 +
Chr2	stalkie_big_nohaplotig	exon	47852794	47852854	100	+	.	Parent=FBgn0050344.3.mrna1;Target=FBgn0050344.3 1461 1521 +
Chr2	stalkie_big_nohaplotig	CDS	47846625	47846835	.	+	0	Parent=FBgn0050344.3.mrna1;Target=FBgn0050344.3 1 205 +
Chr2	stalkie_big_nohaplotig	CDS	47846914	47847026	.	+	2	Parent=FBgn0050344.3.mrna1;Target=FBgn0050344.3 206 318 +
Chr2	stalkie_big_nohaplotig	CDS	47850335	47850485	.	+	0	Parent=FBgn0050344.3.mrna1;Target=FBgn0050344.3 319 469 +
Chr2	stalkie_big_nohaplotig	CDS	47850551	47850734	.	+	2	Parent=FBgn0050344.3.mrna1;Target=FBgn0050344.3 470 653 +
Chr2	stalkie_big_nohaplotig	CDS	47850819	47851005	.	+	1	Parent=FBgn0050344.3.mrna1;Target=FBgn0050344.3 654 840 +
Chr2	stalkie_big_nohaplotig	CDS	47851065	47851200	.	+	0	Parent=FBgn0050344.3.mrna1;Target=FBgn0050344.3 841 976 +
Chr2	stalkie_big_nohaplotig	CDS	47851260	47851396	.	+	2	Parent=FBgn0050344.3.mrna1;Target=FBgn0050344.3 977 1113 +
Chr2	stalkie_big_nohaplotig	CDS	47852317	47852506	.	+	0	Parent=FBgn0050344.3.mrna1;Target=FBgn0050344.3 1114 1303 +
Chr2	stalkie_big_nohaplotig	CDS	47852576	47852732	.	+	2	Parent=FBgn0050344.3.mrna1;Target=FBgn0050344.3 1304 1460 +
Chr2	stalkie_big_nohaplotig	CDS	47852794	47852854	.	+	1	Parent=FBgn0050344.3.mrna1;Target=FBgn0050344.3 1461 1521 +
Chr2	gffcl	locus	47859608	47865042	.	+	.	ID=RLOC_00017129;geneIDs=FBgn0050344.1.path1;transcripts=FBgn0050344.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47859608	47865042	.	+	.	ID=FBgn0050344.1.mrna1;geneID=FBgn0050344.1.path1;Name=FBgn0050344.1;Dir=sensecoverage=100.0;identity=98.5;matches=1575;mismatches=23;indels=1;unknowns=0;Target=FBgn0050344.1 3 62 +;locus=RLOC_00017129
Chr2	stalkie_big_nohaplotig	exon	47859608	47859907	97	+	.	Parent=FBgn0050344.1.mrna1;Target=FBgn0050344.1 1 301 +
Chr2	stalkie_big_nohaplotig	exon	47859974	47860086	97	+	.	Parent=FBgn0050344.1.mrna1;Target=FBgn0050344.1 302 414 +
Chr2	stalkie_big_nohaplotig	exon	47862921	47863071	98	+	.	Parent=FBgn0050344.1.mrna1;Target=FBgn0050344.1 415 565 +
Chr2	stalkie_big_nohaplotig	exon	47863138	47863321	98	+	.	Parent=FBgn0050344.1.mrna1;Target=FBgn0050344.1 566 749 +
Chr2	stalkie_big_nohaplotig	exon	47863376	47863562	98	+	.	Parent=FBgn0050344.1.mrna1;Target=FBgn0050344.1 750 936 +
Chr2	stalkie_big_nohaplotig	exon	47863704	47863839	99	+	.	Parent=FBgn0050344.1.mrna1;Target=FBgn0050344.1 937 1072 +
Chr2	stalkie_big_nohaplotig	exon	47863900	47864036	100	+	.	Parent=FBgn0050344.1.mrna1;Target=FBgn0050344.1 1073 1209 +
Chr2	stalkie_big_nohaplotig	exon	47864504	47864693	99	+	.	Parent=FBgn0050344.1.mrna1;Target=FBgn0050344.1 1210 1399 +
Chr2	stalkie_big_nohaplotig	exon	47864777	47864933	98	+	.	Parent=FBgn0050344.1.mrna1;Target=FBgn0050344.1 1400 1556 +
Chr2	stalkie_big_nohaplotig	exon	47865000	47865042	100	+	.	Parent=FBgn0050344.1.mrna1;Target=FBgn0050344.1 1557 1599 +
Chr2	stalkie_big_nohaplotig	CDS	47859610	47859668	.	+	0	Parent=FBgn0050344.1.mrna1
Chr2	gffcl	locus	47881074	47885783	.	+	.	ID=RLOC_00017130;geneIDs=FBgn0050345.1.path1;transcripts=FBgn0050345.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47881074	47885783	.	+	.	ID=FBgn0050345.1.mrna1;geneID=FBgn0050345.1.path1;Name=FBgn0050345.1;Dir=sensecoverage=100.0;identity=99.7;matches=1529;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017130
Chr2	stalkie_big_nohaplotig	exon	47881074	47881293	100	+	.	Parent=FBgn0050345.1.mrna1;Target=FBgn0050345.1 1 220 +
Chr2	stalkie_big_nohaplotig	exon	47881361	47881473	99	+	.	Parent=FBgn0050345.1.mrna1;Target=FBgn0050345.1 221 333 +
Chr2	stalkie_big_nohaplotig	exon	47883327	47883477	100	+	.	Parent=FBgn0050345.1.mrna1;Target=FBgn0050345.1 334 484 +
Chr2	stalkie_big_nohaplotig	exon	47884348	47884531	100	+	.	Parent=FBgn0050345.1.mrna1;Target=FBgn0050345.1 485 668 +
Chr2	stalkie_big_nohaplotig	exon	47884597	47884783	100	+	.	Parent=FBgn0050345.1.mrna1;Target=FBgn0050345.1 669 855 +
Chr2	stalkie_big_nohaplotig	exon	47884853	47884988	99	+	.	Parent=FBgn0050345.1.mrna1;Target=FBgn0050345.1 856 991 +
Chr2	stalkie_big_nohaplotig	exon	47885048	47885184	100	+	.	Parent=FBgn0050345.1.mrna1;Target=FBgn0050345.1 992 1128 +
Chr2	stalkie_big_nohaplotig	exon	47885247	47885436	99	+	.	Parent=FBgn0050345.1.mrna1;Target=FBgn0050345.1 1129 1318 +
Chr2	stalkie_big_nohaplotig	exon	47885511	47885667	99	+	.	Parent=FBgn0050345.1.mrna1;Target=FBgn0050345.1 1319 1475 +
Chr2	stalkie_big_nohaplotig	exon	47885726	47885783	100	+	.	Parent=FBgn0050345.1.mrna1;Target=FBgn0050345.1 1476 1533 +
Chr2	stalkie_big_nohaplotig	CDS	47881074	47881293	.	+	0	Parent=FBgn0050345.1.mrna1;Target=FBgn0050345.1 1 220 +
Chr2	stalkie_big_nohaplotig	CDS	47881361	47881473	.	+	2	Parent=FBgn0050345.1.mrna1;Target=FBgn0050345.1 221 333 +
Chr2	stalkie_big_nohaplotig	CDS	47883327	47883477	.	+	0	Parent=FBgn0050345.1.mrna1;Target=FBgn0050345.1 334 484 +
Chr2	stalkie_big_nohaplotig	CDS	47884348	47884531	.	+	2	Parent=FBgn0050345.1.mrna1;Target=FBgn0050345.1 485 668 +
Chr2	stalkie_big_nohaplotig	CDS	47884597	47884783	.	+	1	Parent=FBgn0050345.1.mrna1;Target=FBgn0050345.1 669 855 +
Chr2	stalkie_big_nohaplotig	CDS	47884853	47884988	.	+	0	Parent=FBgn0050345.1.mrna1;Target=FBgn0050345.1 856 991 +
Chr2	stalkie_big_nohaplotig	CDS	47885048	47885184	.	+	2	Parent=FBgn0050345.1.mrna1;Target=FBgn0050345.1 992 1128 +
Chr2	stalkie_big_nohaplotig	CDS	47885247	47885436	.	+	0	Parent=FBgn0050345.1.mrna1;Target=FBgn0050345.1 1129 1318 +
Chr2	stalkie_big_nohaplotig	CDS	47885511	47885667	.	+	2	Parent=FBgn0050345.1.mrna1;Target=FBgn0050345.1 1319 1475 +
Chr2	stalkie_big_nohaplotig	CDS	47885726	47885783	.	+	1	Parent=FBgn0050345.1.mrna1;Target=FBgn0050345.1 1476 1533 +
Chr2	gffcl	locus	47886694	47909518	.	-	.	ID=RLOC_00017131;geneIDs=FBgn0033387.1.path1;transcripts=FBgn0033387.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47886694	47909518	.	-	.	ID=FBgn0033387.1.mrna1;geneID=FBgn0033387.1.path1;Name=FBgn0033387.1;Dir=sensecoverage=100.0;identity=98.0;matches=1588;mismatches=32;indels=0;unknowns=0;locus=RLOC_00017131
Chr2	stalkie_big_nohaplotig	exon	47886694	47886748	98	-	.	Parent=FBgn0033387.1.mrna1;Target=FBgn0033387.1 1566 1620 +
Chr2	stalkie_big_nohaplotig	exon	47886830	47886986	93	-	.	Parent=FBgn0033387.1.mrna1;Target=FBgn0033387.1 1409 1565 +
Chr2	stalkie_big_nohaplotig	exon	47887050	47887239	98	-	.	Parent=FBgn0033387.1.mrna1;Target=FBgn0033387.1 1219 1408 +
Chr2	stalkie_big_nohaplotig	exon	47888182	47888318	100	-	.	Parent=FBgn0033387.1.mrna1;Target=FBgn0033387.1 1082 1218 +
Chr2	stalkie_big_nohaplotig	exon	47888382	47888519	93	-	.	Parent=FBgn0033387.1.mrna1;Target=FBgn0033387.1 944 1081 +
Chr2	stalkie_big_nohaplotig	exon	47901983	47902329	98	-	.	Parent=FBgn0033387.1.mrna1;Target=FBgn0033387.1 597 943 +
Chr2	stalkie_big_nohaplotig	exon	47902453	47902636	97	-	.	Parent=FBgn0033387.1.mrna1;Target=FBgn0033387.1 413 596 +
Chr2	stalkie_big_nohaplotig	exon	47902698	47902848	100	-	.	Parent=FBgn0033387.1.mrna1;Target=FBgn0033387.1 262 412 +
Chr2	stalkie_big_nohaplotig	exon	47909174	47909283	100	-	.	Parent=FBgn0033387.1.mrna1;Target=FBgn0033387.1 152 261 +
Chr2	stalkie_big_nohaplotig	exon	47909368	47909518	99	-	.	Parent=FBgn0033387.1.mrna1;Target=FBgn0033387.1 1 151 +
Chr2	stalkie_big_nohaplotig	CDS	47886694	47886748	.	-	1	Parent=FBgn0033387.1.mrna1;Target=FBgn0033387.1 1566 1620 +
Chr2	stalkie_big_nohaplotig	CDS	47886830	47886986	.	-	2	Parent=FBgn0033387.1.mrna1;Target=FBgn0033387.1 1409 1565 +
Chr2	stalkie_big_nohaplotig	CDS	47887050	47887239	.	-	0	Parent=FBgn0033387.1.mrna1;Target=FBgn0033387.1 1219 1408 +
Chr2	stalkie_big_nohaplotig	CDS	47888182	47888318	.	-	2	Parent=FBgn0033387.1.mrna1;Target=FBgn0033387.1 1082 1218 +
Chr2	stalkie_big_nohaplotig	CDS	47888382	47888519	.	-	2	Parent=FBgn0033387.1.mrna1;Target=FBgn0033387.1 944 1081 +
Chr2	stalkie_big_nohaplotig	CDS	47901983	47902329	.	-	1	Parent=FBgn0033387.1.mrna1;Target=FBgn0033387.1 597 943 +
Chr2	stalkie_big_nohaplotig	CDS	47902453	47902636	.	-	2	Parent=FBgn0033387.1.mrna1;Target=FBgn0033387.1 413 596 +
Chr2	stalkie_big_nohaplotig	CDS	47902698	47902848	.	-	0	Parent=FBgn0033387.1.mrna1;Target=FBgn0033387.1 262 412 +
Chr2	stalkie_big_nohaplotig	CDS	47909174	47909283	.	-	2	Parent=FBgn0033387.1.mrna1;Target=FBgn0033387.1 152 261 +
Chr2	stalkie_big_nohaplotig	CDS	47909368	47909518	.	-	0	Parent=FBgn0033387.1.mrna1;Target=FBgn0033387.1 1 151 +
Chr2	gffcl	locus	47914474	47922587	.	-	.	ID=RLOC_00017132;geneIDs=FBgn0033388.1.path1;transcripts=FBgn0033388.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47914474	47922587	.	-	.	ID=FBgn0033388.1.mrna1;geneID=FBgn0033388.1.path1;Name=FBgn0033388.1;Dir=sensecoverage=100.0;identity=98.6;matches=1592;mismatches=22;indels=0;unknowns=0;locus=RLOC_00017132
Chr2	stalkie_big_nohaplotig	exon	47914474	47914528	98	-	.	Parent=FBgn0033388.1.mrna1;Target=FBgn0033388.1 1560 1614 +
Chr2	stalkie_big_nohaplotig	exon	47914609	47914765	99	-	.	Parent=FBgn0033388.1.mrna1;Target=FBgn0033388.1 1403 1559 +
Chr2	stalkie_big_nohaplotig	exon	47915152	47915341	98	-	.	Parent=FBgn0033388.1.mrna1;Target=FBgn0033388.1 1213 1402 +
Chr2	stalkie_big_nohaplotig	exon	47916537	47916673	99	-	.	Parent=FBgn0033388.1.mrna1;Target=FBgn0033388.1 1076 1212 +
Chr2	stalkie_big_nohaplotig	exon	47916747	47917102	97	-	.	Parent=FBgn0033388.1.mrna1;Target=FBgn0033388.1 720 1075 +
Chr2	stalkie_big_nohaplotig	exon	47917155	47917338	98	-	.	Parent=FBgn0033388.1.mrna1;Target=FBgn0033388.1 536 719 +
Chr2	stalkie_big_nohaplotig	exon	47917397	47917547	96	-	.	Parent=FBgn0033388.1.mrna1;Target=FBgn0033388.1 385 535 +
Chr2	stalkie_big_nohaplotig	exon	47922146	47922255	100	-	.	Parent=FBgn0033388.1.mrna1;Target=FBgn0033388.1 275 384 +
Chr2	stalkie_big_nohaplotig	exon	47922314	47922587	100	-	.	Parent=FBgn0033388.1.mrna1;Target=FBgn0033388.1 1 274 +
Chr2	stalkie_big_nohaplotig	CDS	47914474	47914528	.	-	1	Parent=FBgn0033388.1.mrna1;Target=FBgn0033388.1 1560 1614 +
Chr2	stalkie_big_nohaplotig	CDS	47914609	47914765	.	-	2	Parent=FBgn0033388.1.mrna1;Target=FBgn0033388.1 1403 1559 +
Chr2	stalkie_big_nohaplotig	CDS	47915152	47915341	.	-	0	Parent=FBgn0033388.1.mrna1;Target=FBgn0033388.1 1213 1402 +
Chr2	stalkie_big_nohaplotig	CDS	47916537	47916673	.	-	2	Parent=FBgn0033388.1.mrna1;Target=FBgn0033388.1 1076 1212 +
Chr2	stalkie_big_nohaplotig	CDS	47916747	47917102	.	-	1	Parent=FBgn0033388.1.mrna1;Target=FBgn0033388.1 720 1075 +
Chr2	stalkie_big_nohaplotig	CDS	47917155	47917338	.	-	2	Parent=FBgn0033388.1.mrna1;Target=FBgn0033388.1 536 719 +
Chr2	stalkie_big_nohaplotig	CDS	47917397	47917547	.	-	0	Parent=FBgn0033388.1.mrna1;Target=FBgn0033388.1 385 535 +
Chr2	stalkie_big_nohaplotig	CDS	47922146	47922255	.	-	2	Parent=FBgn0033388.1.mrna1;Target=FBgn0033388.1 275 384 +
Chr2	stalkie_big_nohaplotig	CDS	47922314	47922587	.	-	0	Parent=FBgn0033388.1.mrna1;Target=FBgn0033388.1 1 274 +
Chr2	gffcl	locus	47925961	47926242	.	-	.	ID=RLOC_00017133;geneIDs=comp181759_c0_seq1.path1;transcripts=comp181759_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47925961	47926242	.	-	.	ID=comp181759_c0_seq1.mrna1;geneID=comp181759_c0_seq1.path1;Name=comp181759_c0_seq1;Dir=indeterminatecoverage=90.7;identity=99.3;matches=280;mismatches=2;indels=0;unknowns=0;Target=comp181759_c0_seq1 307 26 .;CDS_Target=comp181759_c0_seq1 125 27 .;locus=RLOC_00017133
Chr2	stalkie_big_nohaplotig	exon	47925961	47926242	99	-	.	Parent=comp181759_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	47926143	47926241	.	-	0	Parent=comp181759_c0_seq1.mrna1
Chr2	gffcl	locus	47926796	47944013	.	-	.	ID=RLOC_00017134;geneIDs=FBgn0003071.1.path1,comp61136_c0_seq1.path1,comp135552_c0_seq1.path1;transcripts=FBgn0003071.1.mrna1,comp135552_c0_seq1.mrna1,comp61136_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47926796	47944013	.	-	.	ID=FBgn0003071.1.mrna1;geneID=FBgn0003071.1.path1;Name=FBgn0003071.1;Dir=sensecoverage=100.0;identity=99.6;matches=2379;mismatches=9;indels=0;unknowns=0;locus=RLOC_00017134
Chr2	stalkie_big_nohaplotig	exon	47926796	47926931	100	-	.	Parent=FBgn0003071.1.mrna1;Target=FBgn0003071.1 2253 2388 +
Chr2	stalkie_big_nohaplotig	exon	47926994	47927216	100	-	.	Parent=FBgn0003071.1.mrna1;Target=FBgn0003071.1 2030 2252 +
Chr2	stalkie_big_nohaplotig	exon	47927282	47927901	99	-	.	Parent=FBgn0003071.1.mrna1;Target=FBgn0003071.1 1410 2029 +
Chr2	stalkie_big_nohaplotig	exon	47927959	47928122	100	-	.	Parent=FBgn0003071.1.mrna1;Target=FBgn0003071.1 1246 1409 +
Chr2	stalkie_big_nohaplotig	exon	47928188	47928466	100	-	.	Parent=FBgn0003071.1.mrna1;Target=FBgn0003071.1 967 1245 +
Chr2	stalkie_big_nohaplotig	exon	47928541	47928729	99	-	.	Parent=FBgn0003071.1.mrna1;Target=FBgn0003071.1 778 966 +
Chr2	stalkie_big_nohaplotig	exon	47932571	47932679	100	-	.	Parent=FBgn0003071.1.mrna1;Target=FBgn0003071.1 669 777 +
Chr2	stalkie_big_nohaplotig	exon	47936981	47937135	100	-	.	Parent=FBgn0003071.1.mrna1;Target=FBgn0003071.1 514 668 +
Chr2	stalkie_big_nohaplotig	exon	47937198	47937539	99	-	.	Parent=FBgn0003071.1.mrna1;Target=FBgn0003071.1 172 513 +
Chr2	stalkie_big_nohaplotig	exon	47943843	47944013	99	-	.	Parent=FBgn0003071.1.mrna1;Target=FBgn0003071.1 1 171 +
Chr2	stalkie_big_nohaplotig	CDS	47926796	47926931	.	-	1	Parent=FBgn0003071.1.mrna1;Target=FBgn0003071.1 2253 2388 +
Chr2	stalkie_big_nohaplotig	CDS	47926994	47927216	.	-	2	Parent=FBgn0003071.1.mrna1;Target=FBgn0003071.1 2030 2252 +
Chr2	stalkie_big_nohaplotig	CDS	47927282	47927901	.	-	1	Parent=FBgn0003071.1.mrna1;Target=FBgn0003071.1 1410 2029 +
Chr2	stalkie_big_nohaplotig	CDS	47927959	47928122	.	-	0	Parent=FBgn0003071.1.mrna1;Target=FBgn0003071.1 1246 1409 +
Chr2	stalkie_big_nohaplotig	CDS	47928188	47928466	.	-	0	Parent=FBgn0003071.1.mrna1;Target=FBgn0003071.1 967 1245 +
Chr2	stalkie_big_nohaplotig	CDS	47928541	47928729	.	-	0	Parent=FBgn0003071.1.mrna1;Target=FBgn0003071.1 778 966 +
Chr2	stalkie_big_nohaplotig	CDS	47932571	47932679	.	-	1	Parent=FBgn0003071.1.mrna1;Target=FBgn0003071.1 669 777 +
Chr2	stalkie_big_nohaplotig	CDS	47936981	47937135	.	-	0	Parent=FBgn0003071.1.mrna1;Target=FBgn0003071.1 514 668 +
Chr2	stalkie_big_nohaplotig	CDS	47937198	47937539	.	-	0	Parent=FBgn0003071.1.mrna1;Target=FBgn0003071.1 172 513 +
Chr2	stalkie_big_nohaplotig	CDS	47943843	47944013	.	-	0	Parent=FBgn0003071.1.mrna1;Target=FBgn0003071.1 1 171 +
Chr2	stalkie_big_nohaplotig	mRNA	47931901	47932593	.	-	.	ID=comp135552_c0_seq1.mrna1;geneID=comp135552_c0_seq1.path1;Name=comp135552_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=431;mismatches=2;indels=0;unknowns=0;Target=comp135552_c0_seq1 281 147 .;locus=RLOC_00017134
Chr2	stalkie_big_nohaplotig	exon	47931901	47931925	100	-	.	Parent=comp135552_c0_seq1.mrna1;Target=comp135552_c0_seq1 433 409 .
Chr2	stalkie_big_nohaplotig	exon	47932186	47932593	99	-	.	Parent=comp135552_c0_seq1.mrna1;Target=comp135552_c0_seq1 408 1 .
Chr2	stalkie_big_nohaplotig	CDS	47932313	47932447	.	-	0	Parent=comp135552_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47936136	47936998	.	-	.	ID=comp61136_c0_seq1.mrna1;geneID=comp61136_c0_seq1.path1;Name=comp61136_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=571;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017134
Chr2	stalkie_big_nohaplotig	exon	47936136	47936690	99	-	.	Parent=comp61136_c0_seq1.mrna1;Target=comp61136_c0_seq1 19 573 +
Chr2	stalkie_big_nohaplotig	exon	47936981	47936998	100	-	.	Parent=comp61136_c0_seq1.mrna1;Target=comp61136_c0_seq1 1 18 +
Chr2	stalkie_big_nohaplotig	CDS	47936552	47936690	.	-	1	Parent=comp61136_c0_seq1.mrna1;Target=comp61136_c0_seq1 19 157 +
Chr2	stalkie_big_nohaplotig	CDS	47936981	47936997	.	-	0	Parent=comp61136_c0_seq1.mrna1;Target=comp61136_c0_seq1 2 18 +
Chr2	gffcl	locus	47929159	47930618	.	+	.	ID=RLOC_00017135;geneIDs=comp161898_c0_seq1.path1;transcripts=comp161898_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47929159	47930618	.	+	.	ID=comp161898_c0_seq1.mrna1;geneID=comp161898_c0_seq1.path1;Name=comp161898_c0_seq1;Dir=indeterminatecoverage=99.1;identity=94.9;matches=1404;mismatches=49;indels=27;unknowns=0;Target=comp161898_c0_seq1 1473 1 .;CDS_Target=comp161898_c0_seq1 1464 1336 .;locus=RLOC_00017135
Chr2	stalkie_big_nohaplotig	exon	47929159	47930618	94	+	.	Parent=comp161898_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	47930481	47930609	.	+	0	Parent=comp161898_c0_seq1.mrna1
Chr2	gffcl	locus	47932657	47935446	.	+	.	ID=RLOC_00017136;geneIDs=comp163670_c3_seq1.path1;transcripts=comp163670_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47932657	47935446	.	+	.	ID=comp163670_c3_seq1.mrna1;geneID=comp163670_c3_seq1.path1;Name=comp163670_c3_seq1;Dir=indeterminatecoverage=100.0;identity=91.9;matches=2561;mismatches=135;indels=90;unknowns=0;Target=comp163670_c3_seq1 2458 2309 .;locus=RLOC_00017136
Chr2	stalkie_big_nohaplotig	exon	47932657	47933909	90	+	.	Parent=comp163670_c3_seq1.mrna1;Target=comp163670_c3_seq1 1291 1 .
Chr2	stalkie_big_nohaplotig	exon	47933980	47935446	93	+	.	Parent=comp163670_c3_seq1.mrna1;Target=comp163670_c3_seq1 2762 1292 .
Chr2	stalkie_big_nohaplotig	CDS	47934999	47935148	.	+	0	Parent=comp163670_c3_seq1.mrna1
Chr2	gffcl	locus	47935166	47935275	.	-	.	ID=RLOC_00017137;geneIDs=comp117899_c0_seq1.path1;transcripts=comp117899_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47935166	47935275	.	-	.	ID=comp117899_c0_seq1.mrna1;geneID=comp117899_c0_seq1.path1;Name=comp117899_c0_seq1;Dir=indeterminatecoverage=100.0;identity=86.7;matches=91;mismatches=14;indels=0;unknowns=0;Target=comp117899_c0_seq1 24 1 .;locus=RLOC_00017137
Chr2	stalkie_big_nohaplotig	exon	47935166	47935246	82	-	.	Parent=comp117899_c0_seq1.mrna1;Target=comp117899_c0_seq1 243 163 .
Chr2	stalkie_big_nohaplotig	exon	47935252	47935275	100	-	.	Parent=comp117899_c0_seq1.mrna1;Target=comp117899_c0_seq1 24 1 .
Chr2	stalkie_big_nohaplotig	CDS	47935252	47935275	.	-	0	Parent=comp117899_c0_seq1.mrna1
Chr2	gffcl	locus	47947523	47947758	.	-	.	ID=RLOC_00017138;geneIDs=comp113229_c0_seq1.path2;transcripts=comp113229_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	47947523	47947758	.	-	.	ID=comp113229_c0_seq1.mrna2;geneID=comp113229_c0_seq1.path2;Name=comp113229_c0_seq1;Dir=indeterminatecoverage=62.4;identity=100.0;matches=236;mismatches=0;indels=0;unknowns=0;Target=comp113229_c0_seq1 378 143 .;locus=RLOC_00017138
Chr2	stalkie_big_nohaplotig	exon	47947523	47947758	100	-	.	Parent=comp113229_c0_seq1.mrna2
Chr2	gffcl	locus	47949003	47950141	.	-	.	ID=RLOC_00017139;geneIDs=comp156955_c2_seq1.path1;transcripts=comp156955_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47949003	47950141	.	-	.	ID=comp156955_c2_seq1.mrna1;geneID=comp156955_c2_seq1.path1;Name=comp156955_c2_seq1;Dir=indeterminatecoverage=95.1;identity=94.1;matches=1089;mismatches=39;indels=29;unknowns=0;Target=comp156955_c2_seq1 1205 60 .;CDS_Target=comp156955_c2_seq1 77 60 .;locus=RLOC_00017139
Chr2	stalkie_big_nohaplotig	exon	47949003	47950141	94	-	.	Parent=comp156955_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	47950124	47950141	.	-	0	Parent=comp156955_c2_seq1.mrna1
Chr2	gffcl	locus	47950164	47950389	.	+	.	ID=RLOC_00017140;geneIDs=comp1242189_c0_seq1.path1;transcripts=comp1242189_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47950164	47950389	.	+	.	ID=comp1242189_c0_seq1.mrna1;geneID=comp1242189_c0_seq1.path1;Name=comp1242189_c0_seq1;Dir=indeterminatecoverage=81.8;identity=82.4;matches=197;mismatches=10;indels=32;unknowns=0;Target=comp1242189_c0_seq1 264 45 .;CDS_Target=comp1242189_c0_seq1 91 47 .;locus=RLOC_00017140
Chr2	stalkie_big_nohaplotig	exon	47950164	47950389	82	+	.	Parent=comp1242189_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	47950166	47950210	.	+	0	Parent=comp1242189_c0_seq1.mrna1
Chr2	gffcl	locus	47950692	47951827	.	+	.	ID=RLOC_00017141;geneIDs=comp159249_c0_seq1.path1;transcripts=comp159249_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47950692	47951827	.	+	.	ID=comp159249_c0_seq1.mrna1;geneID=comp159249_c0_seq1.path1;Name=comp159249_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.2;matches=1102;mismatches=17;indels=51;unknowns=0;Target=comp159249_c0_seq1 1153 1 .;CDS_Target=comp159249_c0_seq1 882 799 .;locus=RLOC_00017141
Chr2	stalkie_big_nohaplotig	exon	47950692	47951827	94	+	.	Parent=comp159249_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	47951507	47951579	.	+	0	Parent=comp159249_c0_seq1.mrna1
Chr2	gffcl	locus	47953571	47960641	.	-	.	ID=RLOC_00017142;geneIDs=FBgn0004907.4.path1,comp151994_c0_seq1.path2;transcripts=FBgn0004907.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47953571	47960641	.	-	.	ID=FBgn0004907.4.mrna1;geneID=FBgn0004907.4.path1;Name=FBgn0004907.4;Dir=sensecoverage=100.0;identity=99.9;matches=770;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017142
Chr2	stalkie_big_nohaplotig	exon	47953571	47953723	100	-	.	Parent=FBgn0004907.4.mrna1;Target=FBgn0004907.4 619 771 +
Chr2	stalkie_big_nohaplotig	exon	47956469	47956632	99	-	.	Parent=FBgn0004907.4.mrna1;Target=FBgn0004907.4 455 618 +
Chr2	stalkie_big_nohaplotig	exon	47956772	47956895	100	-	.	Parent=FBgn0004907.4.mrna1;Target=FBgn0004907.4 331 454 +
Chr2	stalkie_big_nohaplotig	exon	47960169	47960295	100	-	.	Parent=FBgn0004907.4.mrna1;Target=FBgn0004907.4 204 330 +
Chr2	stalkie_big_nohaplotig	exon	47960360	47960473	100	-	.	Parent=FBgn0004907.4.mrna1;Target=FBgn0004907.4 90 203 +
Chr2	stalkie_big_nohaplotig	exon	47960553	47960641	100	-	.	Parent=FBgn0004907.4.mrna1;Target=FBgn0004907.4 1 89 +
Chr2	stalkie_big_nohaplotig	CDS	47953571	47953723	.	-	0	Parent=FBgn0004907.4.mrna1;Target=FBgn0004907.4 619 771 +
Chr2	stalkie_big_nohaplotig	CDS	47956469	47956632	.	-	2	Parent=FBgn0004907.4.mrna1;Target=FBgn0004907.4 455 618 +
Chr2	stalkie_big_nohaplotig	CDS	47956772	47956895	.	-	0	Parent=FBgn0004907.4.mrna1;Target=FBgn0004907.4 331 454 +
Chr2	stalkie_big_nohaplotig	CDS	47960169	47960295	.	-	1	Parent=FBgn0004907.4.mrna1;Target=FBgn0004907.4 204 330 +
Chr2	stalkie_big_nohaplotig	CDS	47960360	47960473	.	-	1	Parent=FBgn0004907.4.mrna1;Target=FBgn0004907.4 90 203 +
Chr2	stalkie_big_nohaplotig	CDS	47960553	47960641	.	-	0	Parent=FBgn0004907.4.mrna1;Target=FBgn0004907.4 1 89 +
Chr2	gffcl	locus	47993159	47993813	.	-	.	ID=RLOC_00017143;geneIDs=comp89156_c0_seq1.path1;transcripts=comp89156_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47993159	47993813	.	-	.	ID=comp89156_c0_seq1.mrna1;geneID=comp89156_c0_seq1.path1;Name=comp89156_c0_seq1;Dir=indeterminatecoverage=97.8;identity=100.0;matches=655;mismatches=0;indels=0;unknowns=0;Target=comp89156_c0_seq1 655 1 .;CDS_Target=comp89156_c0_seq1 355 242 .;locus=RLOC_00017143
Chr2	stalkie_big_nohaplotig	exon	47993159	47993813	100	-	.	Parent=comp89156_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	47993459	47993572	.	-	0	Parent=comp89156_c0_seq1.mrna1
Chr2	gffcl	locus	47999168	48000048	.	-	.	ID=RLOC_00017144;geneIDs=comp161840_c3_seq1.path1;transcripts=comp161840_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	47999168	48000048	.	-	.	ID=comp161840_c3_seq1.mrna1;geneID=comp161840_c3_seq1.path1;Name=comp161840_c3_seq1;Dir=indeterminatecoverage=59.2;identity=97.0;matches=862;mismatches=13;indels=14;unknowns=0;Target=comp161840_c3_seq1 883 1 .;CDS_Target=comp161840_c3_seq1 255 148 .;locus=RLOC_00017144
Chr2	stalkie_big_nohaplotig	exon	47999168	48000048	96	-	.	Parent=comp161840_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	47999794	47999901	.	-	0	Parent=comp161840_c3_seq1.mrna1
Chr2	gffcl	locus	48002723	48003389	.	-	.	ID=RLOC_00017145;geneIDs=FBgn0050390.1.path1;transcripts=FBgn0050390.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48002723	48003389	.	-	.	ID=FBgn0050390.1.mrna1;geneID=FBgn0050390.1.path1;Name=FBgn0050390.1;Dir=sensecoverage=100.0;identity=100.0;matches=600;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017145
Chr2	stalkie_big_nohaplotig	exon	48002723	48002934	100	-	.	Parent=FBgn0050390.1.mrna1;Target=FBgn0050390.1 389 600 +
Chr2	stalkie_big_nohaplotig	exon	48003002	48003389	100	-	.	Parent=FBgn0050390.1.mrna1;Target=FBgn0050390.1 1 388 +
Chr2	stalkie_big_nohaplotig	CDS	48002723	48002934	.	-	2	Parent=FBgn0050390.1.mrna1;Target=FBgn0050390.1 389 600 +
Chr2	stalkie_big_nohaplotig	CDS	48003002	48003389	.	-	0	Parent=FBgn0050390.1.mrna1;Target=FBgn0050390.1 1 388 +
Chr2	gffcl	locus	48003519	48005145	.	+	.	ID=RLOC_00017146;geneIDs=comp163090_c1_seq1.path1;transcripts=comp163090_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48003519	48005145	.	+	.	ID=comp163090_c1_seq1.mrna1;geneID=comp163090_c1_seq1.path1;Name=comp163090_c1_seq1;Dir=indeterminatecoverage=87.3;identity=98.8;matches=1608;mismatches=19;indels=0;unknowns=0;Target=comp163090_c1_seq1 1631 5 .;CDS_Target=comp163090_c1_seq1 303 7 .;locus=RLOC_00017146
Chr2	stalkie_big_nohaplotig	exon	48003519	48005145	98	+	.	Parent=comp163090_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	48003521	48003817	.	+	0	Parent=comp163090_c1_seq1.mrna1
Chr2	gffcl	locus	48012005	48012970	.	+	.	ID=RLOC_00017147;geneIDs=FBgn0033485.1.path1;transcripts=FBgn0033485.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48012005	48012970	.	+	.	ID=FBgn0033485.1.mrna1;geneID=FBgn0033485.1.path1;Name=FBgn0033485.1;Dir=sensecoverage=100.0;identity=100.0;matches=771;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017147
Chr2	stalkie_big_nohaplotig	exon	48012005	48012059	100	+	.	Parent=FBgn0033485.1.mrna1;Target=FBgn0033485.1 1 55 +
Chr2	stalkie_big_nohaplotig	exon	48012129	48012376	100	+	.	Parent=FBgn0033485.1.mrna1;Target=FBgn0033485.1 56 303 +
Chr2	stalkie_big_nohaplotig	exon	48012442	48012660	100	+	.	Parent=FBgn0033485.1.mrna1;Target=FBgn0033485.1 304 522 +
Chr2	stalkie_big_nohaplotig	exon	48012722	48012970	100	+	.	Parent=FBgn0033485.1.mrna1;Target=FBgn0033485.1 523 771 +
Chr2	stalkie_big_nohaplotig	CDS	48012005	48012059	.	+	0	Parent=FBgn0033485.1.mrna1;Target=FBgn0033485.1 1 55 +
Chr2	stalkie_big_nohaplotig	CDS	48012129	48012376	.	+	2	Parent=FBgn0033485.1.mrna1;Target=FBgn0033485.1 56 303 +
Chr2	stalkie_big_nohaplotig	CDS	48012442	48012660	.	+	0	Parent=FBgn0033485.1.mrna1;Target=FBgn0033485.1 304 522 +
Chr2	stalkie_big_nohaplotig	CDS	48012722	48012970	.	+	0	Parent=FBgn0033485.1.mrna1;Target=FBgn0033485.1 523 771 +
Chr2	gffcl	locus	48017338	48021528	.	+	.	ID=RLOC_00017148;geneIDs=FBgn0261786.1.path1;transcripts=FBgn0261786.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48017338	48021528	.	+	.	ID=FBgn0261786.1.mrna1;geneID=FBgn0261786.1.path1;Name=FBgn0261786.1;Dir=sensecoverage=99.8;identity=100.0;matches=1851;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017148
Chr2	stalkie_big_nohaplotig	exon	48017338	48017471	100	+	.	Parent=FBgn0261786.1.mrna1;Target=FBgn0261786.1 4 137 +
Chr2	stalkie_big_nohaplotig	exon	48017535	48017669	100	+	.	Parent=FBgn0261786.1.mrna1;Target=FBgn0261786.1 138 272 +
Chr2	stalkie_big_nohaplotig	exon	48017743	48017877	100	+	.	Parent=FBgn0261786.1.mrna1;Target=FBgn0261786.1 273 407 +
Chr2	stalkie_big_nohaplotig	exon	48018634	48018689	100	+	.	Parent=FBgn0261786.1.mrna1;Target=FBgn0261786.1 408 463 +
Chr2	stalkie_big_nohaplotig	exon	48018764	48019383	100	+	.	Parent=FBgn0261786.1.mrna1;Target=FBgn0261786.1 464 1083 +
Chr2	stalkie_big_nohaplotig	exon	48019457	48019617	100	+	.	Parent=FBgn0261786.1.mrna1;Target=FBgn0261786.1 1084 1244 +
Chr2	stalkie_big_nohaplotig	exon	48020919	48021528	100	+	.	Parent=FBgn0261786.1.mrna1;Target=FBgn0261786.1 1245 1854 +
Chr2	stalkie_big_nohaplotig	CDS	48017338	48017471	.	+	0	Parent=FBgn0261786.1.mrna1;Target=FBgn0261786.1 4 137 +
Chr2	stalkie_big_nohaplotig	CDS	48017535	48017669	.	+	1	Parent=FBgn0261786.1.mrna1;Target=FBgn0261786.1 138 272 +
Chr2	stalkie_big_nohaplotig	CDS	48017743	48017877	.	+	1	Parent=FBgn0261786.1.mrna1;Target=FBgn0261786.1 273 407 +
Chr2	stalkie_big_nohaplotig	CDS	48018634	48018689	.	+	1	Parent=FBgn0261786.1.mrna1;Target=FBgn0261786.1 408 463 +
Chr2	stalkie_big_nohaplotig	CDS	48018764	48019383	.	+	2	Parent=FBgn0261786.1.mrna1;Target=FBgn0261786.1 464 1083 +
Chr2	stalkie_big_nohaplotig	CDS	48019457	48019617	.	+	0	Parent=FBgn0261786.1.mrna1;Target=FBgn0261786.1 1084 1244 +
Chr2	stalkie_big_nohaplotig	CDS	48020919	48021528	.	+	1	Parent=FBgn0261786.1.mrna1;Target=FBgn0261786.1 1245 1854 +
Chr2	gffcl	locus	48026461	48032217	.	-	.	ID=RLOC_00017149;geneIDs=FBgn0015277.1.path1;transcripts=FBgn0015277.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48026461	48032217	.	-	.	ID=FBgn0015277.1.mrna1;geneID=FBgn0015277.1.path1;Name=FBgn0015277.1;Dir=sensecoverage=100.0;identity=100.0;matches=2868;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017149
Chr2	stalkie_big_nohaplotig	exon	48026461	48026903	100	-	.	Parent=FBgn0015277.1.mrna1;Target=FBgn0015277.1 2426 2868 +
Chr2	stalkie_big_nohaplotig	exon	48026974	48027335	100	-	.	Parent=FBgn0015277.1.mrna1;Target=FBgn0015277.1 2064 2425 +
Chr2	stalkie_big_nohaplotig	exon	48027968	48028241	100	-	.	Parent=FBgn0015277.1.mrna1;Target=FBgn0015277.1 1790 2063 +
Chr2	stalkie_big_nohaplotig	exon	48028312	48029219	100	-	.	Parent=FBgn0015277.1.mrna1;Target=FBgn0015277.1 882 1789 +
Chr2	stalkie_big_nohaplotig	exon	48029288	48029373	100	-	.	Parent=FBgn0015277.1.mrna1;Target=FBgn0015277.1 796 881 +
Chr2	stalkie_big_nohaplotig	exon	48031296	48031391	100	-	.	Parent=FBgn0015277.1.mrna1;Target=FBgn0015277.1 700 795 +
Chr2	stalkie_big_nohaplotig	exon	48031459	48032074	100	-	.	Parent=FBgn0015277.1.mrna1;Target=FBgn0015277.1 84 699 +
Chr2	stalkie_big_nohaplotig	exon	48032135	48032217	100	-	.	Parent=FBgn0015277.1.mrna1;Target=FBgn0015277.1 1 83 +
Chr2	stalkie_big_nohaplotig	CDS	48026461	48026903	.	-	2	Parent=FBgn0015277.1.mrna1;Target=FBgn0015277.1 2426 2868 +
Chr2	stalkie_big_nohaplotig	CDS	48026974	48027335	.	-	1	Parent=FBgn0015277.1.mrna1;Target=FBgn0015277.1 2064 2425 +
Chr2	stalkie_big_nohaplotig	CDS	48027968	48028241	.	-	2	Parent=FBgn0015277.1.mrna1;Target=FBgn0015277.1 1790 2063 +
Chr2	stalkie_big_nohaplotig	CDS	48028312	48029219	.	-	1	Parent=FBgn0015277.1.mrna1;Target=FBgn0015277.1 882 1789 +
Chr2	stalkie_big_nohaplotig	CDS	48029288	48029373	.	-	0	Parent=FBgn0015277.1.mrna1;Target=FBgn0015277.1 796 881 +
Chr2	stalkie_big_nohaplotig	CDS	48031296	48031391	.	-	0	Parent=FBgn0015277.1.mrna1;Target=FBgn0015277.1 700 795 +
Chr2	stalkie_big_nohaplotig	CDS	48031459	48032074	.	-	1	Parent=FBgn0015277.1.mrna1;Target=FBgn0015277.1 84 699 +
Chr2	stalkie_big_nohaplotig	CDS	48032135	48032217	.	-	0	Parent=FBgn0015277.1.mrna1;Target=FBgn0015277.1 1 83 +
Chr2	gffcl	locus	48037692	48038060	.	+	.	ID=RLOC_00017151;geneIDs=FBgn0035025.path1;transcripts=FBgn0035025.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48037692	48038060	.	+	.	ID=FBgn0035025.mrna1;geneID=FBgn0035025.path1;Name=FBgn0035025;Dir=sensecoverage=100.0;identity=100.0;matches=315;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017151
Chr2	stalkie_big_nohaplotig	exon	48037692	48037742	100	+	.	Parent=FBgn0035025.mrna1;Target=FBgn0035025 1 51 +
Chr2	stalkie_big_nohaplotig	exon	48037797	48038060	100	+	.	Parent=FBgn0035025.mrna1;Target=FBgn0035025 52 315 +
Chr2	stalkie_big_nohaplotig	CDS	48037692	48037742	.	+	0	Parent=FBgn0035025.mrna1;Target=FBgn0035025 1 51 +
Chr2	stalkie_big_nohaplotig	CDS	48037797	48038060	.	+	0	Parent=FBgn0035025.mrna1;Target=FBgn0035025 52 315 +
Chr2	gffcl	locus	48040583	48048624	.	-	.	ID=RLOC_00017152;geneIDs=FBgn0035026.1.path1;transcripts=FBgn0035026.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48040583	48048624	.	-	.	ID=FBgn0035026.1.mrna1;geneID=FBgn0035026.1.path1;Name=FBgn0035026.1;Dir=sensecoverage=100.0;identity=99.5;matches=2301;mismatches=12;indels=0;unknowns=0;locus=RLOC_00017152
Chr2	stalkie_big_nohaplotig	exon	48040583	48040704	100	-	.	Parent=FBgn0035026.1.mrna1;Target=FBgn0035026.1 2192 2313 +
Chr2	stalkie_big_nohaplotig	exon	48040757	48040948	99	-	.	Parent=FBgn0035026.1.mrna1;Target=FBgn0035026.1 2000 2191 +
Chr2	stalkie_big_nohaplotig	exon	48041025	48041429	100	-	.	Parent=FBgn0035026.1.mrna1;Target=FBgn0035026.1 1595 1999 +
Chr2	stalkie_big_nohaplotig	exon	48042809	48043411	99	-	.	Parent=FBgn0035026.1.mrna1;Target=FBgn0035026.1 992 1594 +
Chr2	stalkie_big_nohaplotig	exon	48043476	48043657	100	-	.	Parent=FBgn0035026.1.mrna1;Target=FBgn0035026.1 810 991 +
Chr2	stalkie_big_nohaplotig	exon	48043722	48044158	99	-	.	Parent=FBgn0035026.1.mrna1;Target=FBgn0035026.1 373 809 +
Chr2	stalkie_big_nohaplotig	exon	48048159	48048252	100	-	.	Parent=FBgn0035026.1.mrna1;Target=FBgn0035026.1 279 372 +
Chr2	stalkie_big_nohaplotig	exon	48048347	48048624	99	-	.	Parent=FBgn0035026.1.mrna1;Target=FBgn0035026.1 1 278 +
Chr2	stalkie_big_nohaplotig	CDS	48040583	48040704	.	-	2	Parent=FBgn0035026.1.mrna1;Target=FBgn0035026.1 2192 2313 +
Chr2	stalkie_big_nohaplotig	CDS	48040757	48040948	.	-	2	Parent=FBgn0035026.1.mrna1;Target=FBgn0035026.1 2000 2191 +
Chr2	stalkie_big_nohaplotig	CDS	48041025	48041429	.	-	2	Parent=FBgn0035026.1.mrna1;Target=FBgn0035026.1 1595 1999 +
Chr2	stalkie_big_nohaplotig	CDS	48042809	48043411	.	-	2	Parent=FBgn0035026.1.mrna1;Target=FBgn0035026.1 992 1594 +
Chr2	stalkie_big_nohaplotig	CDS	48043476	48043657	.	-	1	Parent=FBgn0035026.1.mrna1;Target=FBgn0035026.1 810 991 +
Chr2	stalkie_big_nohaplotig	CDS	48043722	48044158	.	-	0	Parent=FBgn0035026.1.mrna1;Target=FBgn0035026.1 373 809 +
Chr2	stalkie_big_nohaplotig	CDS	48048159	48048252	.	-	1	Parent=FBgn0035026.1.mrna1;Target=FBgn0035026.1 279 372 +
Chr2	stalkie_big_nohaplotig	CDS	48048347	48048624	.	-	0	Parent=FBgn0035026.1.mrna1;Target=FBgn0035026.1 1 278 +
Chr2	gffcl	locus	48050643	48053271	.	+	.	ID=RLOC_00017153;geneIDs=FBgn0035027.1.path1;transcripts=FBgn0035027.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48050643	48053271	.	+	.	ID=FBgn0035027.1.mrna1;geneID=FBgn0035027.1.path1;Name=FBgn0035027.1;Dir=sensecoverage=100.0;identity=99.1;matches=1870;mismatches=17;indels=0;unknowns=0;locus=RLOC_00017153
Chr2	stalkie_big_nohaplotig	exon	48050643	48050787	98	+	.	Parent=FBgn0035027.1.mrna1;Target=FBgn0035027.1 1 145 +
Chr2	stalkie_big_nohaplotig	exon	48050852	48051055	99	+	.	Parent=FBgn0035027.1.mrna1;Target=FBgn0035027.1 146 349 +
Chr2	stalkie_big_nohaplotig	exon	48051133	48051316	99	+	.	Parent=FBgn0035027.1.mrna1;Target=FBgn0035027.1 350 533 +
Chr2	stalkie_big_nohaplotig	exon	48051380	48051612	99	+	.	Parent=FBgn0035027.1.mrna1;Target=FBgn0035027.1 534 766 +
Chr2	stalkie_big_nohaplotig	exon	48051677	48051890	98	+	.	Parent=FBgn0035027.1.mrna1;Target=FBgn0035027.1 767 980 +
Chr2	stalkie_big_nohaplotig	exon	48051948	48052140	98	+	.	Parent=FBgn0035027.1.mrna1;Target=FBgn0035027.1 981 1173 +
Chr2	stalkie_big_nohaplotig	exon	48052204	48052313	99	+	.	Parent=FBgn0035027.1.mrna1;Target=FBgn0035027.1 1174 1283 +
Chr2	stalkie_big_nohaplotig	exon	48052370	48052488	99	+	.	Parent=FBgn0035027.1.mrna1;Target=FBgn0035027.1 1284 1402 +
Chr2	stalkie_big_nohaplotig	exon	48052647	48052767	100	+	.	Parent=FBgn0035027.1.mrna1;Target=FBgn0035027.1 1403 1523 +
Chr2	stalkie_big_nohaplotig	exon	48052833	48053052	99	+	.	Parent=FBgn0035027.1.mrna1;Target=FBgn0035027.1 1524 1743 +
Chr2	stalkie_big_nohaplotig	exon	48053128	48053271	97	+	.	Parent=FBgn0035027.1.mrna1;Target=FBgn0035027.1 1744 1887 +
Chr2	stalkie_big_nohaplotig	CDS	48050643	48050787	.	+	0	Parent=FBgn0035027.1.mrna1;Target=FBgn0035027.1 1 145 +
Chr2	stalkie_big_nohaplotig	CDS	48050852	48051055	.	+	2	Parent=FBgn0035027.1.mrna1;Target=FBgn0035027.1 146 349 +
Chr2	stalkie_big_nohaplotig	CDS	48051133	48051316	.	+	2	Parent=FBgn0035027.1.mrna1;Target=FBgn0035027.1 350 533 +
Chr2	stalkie_big_nohaplotig	CDS	48051380	48051612	.	+	1	Parent=FBgn0035027.1.mrna1;Target=FBgn0035027.1 534 766 +
Chr2	stalkie_big_nohaplotig	CDS	48051677	48051890	.	+	2	Parent=FBgn0035027.1.mrna1;Target=FBgn0035027.1 767 980 +
Chr2	stalkie_big_nohaplotig	CDS	48051948	48052140	.	+	1	Parent=FBgn0035027.1.mrna1;Target=FBgn0035027.1 981 1173 +
Chr2	stalkie_big_nohaplotig	CDS	48052204	48052313	.	+	0	Parent=FBgn0035027.1.mrna1;Target=FBgn0035027.1 1174 1283 +
Chr2	stalkie_big_nohaplotig	CDS	48052370	48052488	.	+	1	Parent=FBgn0035027.1.mrna1;Target=FBgn0035027.1 1284 1402 +
Chr2	stalkie_big_nohaplotig	CDS	48052647	48052767	.	+	2	Parent=FBgn0035027.1.mrna1;Target=FBgn0035027.1 1403 1523 +
Chr2	stalkie_big_nohaplotig	CDS	48052833	48053052	.	+	1	Parent=FBgn0035027.1.mrna1;Target=FBgn0035027.1 1524 1743 +
Chr2	stalkie_big_nohaplotig	CDS	48053128	48053271	.	+	0	Parent=FBgn0035027.1.mrna1;Target=FBgn0035027.1 1744 1887 +
Chr2	gffcl	locus	48058893	48064387	.	+	.	ID=RLOC_00017154;geneIDs=FBgn0035028.1.path1;transcripts=FBgn0035028.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48058893	48064387	.	+	.	ID=FBgn0035028.1.mrna1;geneID=FBgn0035028.1.path1;Name=FBgn0035028.1;Dir=sensecoverage=100.0;identity=99.5;matches=1770;mismatches=9;indels=0;unknowns=0;locus=RLOC_00017154
Chr2	stalkie_big_nohaplotig	exon	48058893	48059010	100	+	.	Parent=FBgn0035028.1.mrna1;Target=FBgn0035028.1 1 118 +
Chr2	stalkie_big_nohaplotig	exon	48059069	48059217	100	+	.	Parent=FBgn0035028.1.mrna1;Target=FBgn0035028.1 119 267 +
Chr2	stalkie_big_nohaplotig	exon	48059283	48059441	100	+	.	Parent=FBgn0035028.1.mrna1;Target=FBgn0035028.1 268 426 +
Chr2	stalkie_big_nohaplotig	exon	48059502	48059555	100	+	.	Parent=FBgn0035028.1.mrna1;Target=FBgn0035028.1 427 480 +
Chr2	stalkie_big_nohaplotig	exon	48061136	48061268	99	+	.	Parent=FBgn0035028.1.mrna1;Target=FBgn0035028.1 481 613 +
Chr2	stalkie_big_nohaplotig	exon	48061328	48061464	97	+	.	Parent=FBgn0035028.1.mrna1;Target=FBgn0035028.1 614 750 +
Chr2	stalkie_big_nohaplotig	exon	48061815	48061967	100	+	.	Parent=FBgn0035028.1.mrna1;Target=FBgn0035028.1 751 903 +
Chr2	stalkie_big_nohaplotig	exon	48062034	48062138	99	+	.	Parent=FBgn0035028.1.mrna1;Target=FBgn0035028.1 904 1008 +
Chr2	stalkie_big_nohaplotig	exon	48063485	48064041	99	+	.	Parent=FBgn0035028.1.mrna1;Target=FBgn0035028.1 1009 1565 +
Chr2	stalkie_big_nohaplotig	exon	48064119	48064242	100	+	.	Parent=FBgn0035028.1.mrna1;Target=FBgn0035028.1 1566 1689 +
Chr2	stalkie_big_nohaplotig	exon	48064298	48064387	100	+	.	Parent=FBgn0035028.1.mrna1;Target=FBgn0035028.1 1690 1779 +
Chr2	stalkie_big_nohaplotig	CDS	48058893	48059010	.	+	0	Parent=FBgn0035028.1.mrna1;Target=FBgn0035028.1 1 118 +
Chr2	stalkie_big_nohaplotig	CDS	48059069	48059217	.	+	2	Parent=FBgn0035028.1.mrna1;Target=FBgn0035028.1 119 267 +
Chr2	stalkie_big_nohaplotig	CDS	48059283	48059441	.	+	0	Parent=FBgn0035028.1.mrna1;Target=FBgn0035028.1 268 426 +
Chr2	stalkie_big_nohaplotig	CDS	48059502	48059555	.	+	0	Parent=FBgn0035028.1.mrna1;Target=FBgn0035028.1 427 480 +
Chr2	stalkie_big_nohaplotig	CDS	48061136	48061268	.	+	0	Parent=FBgn0035028.1.mrna1;Target=FBgn0035028.1 481 613 +
Chr2	stalkie_big_nohaplotig	CDS	48061328	48061464	.	+	2	Parent=FBgn0035028.1.mrna1;Target=FBgn0035028.1 614 750 +
Chr2	stalkie_big_nohaplotig	CDS	48061815	48061967	.	+	0	Parent=FBgn0035028.1.mrna1;Target=FBgn0035028.1 751 903 +
Chr2	stalkie_big_nohaplotig	CDS	48062034	48062138	.	+	0	Parent=FBgn0035028.1.mrna1;Target=FBgn0035028.1 904 1008 +
Chr2	stalkie_big_nohaplotig	CDS	48063485	48064041	.	+	0	Parent=FBgn0035028.1.mrna1;Target=FBgn0035028.1 1009 1565 +
Chr2	stalkie_big_nohaplotig	CDS	48064119	48064242	.	+	1	Parent=FBgn0035028.1.mrna1;Target=FBgn0035028.1 1566 1689 +
Chr2	stalkie_big_nohaplotig	CDS	48064298	48064387	.	+	0	Parent=FBgn0035028.1.mrna1;Target=FBgn0035028.1 1690 1779 +
Chr2	gffcl	locus	48067324	48067638	.	-	.	ID=RLOC_00017155;geneIDs=Dv_FBgn0209229.1.path1;transcripts=Dv_FBgn0209229.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48067324	48067638	.	-	.	ID=Dv_FBgn0209229.1.mrna1;geneID=Dv_FBgn0209229.1.path1;Name=Dv_FBgn0209229.1;Dir=sensecoverage=100.0;identity=97.9;matches=238;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017155
Chr2	stalkie_big_nohaplotig	exon	48067324	48067409	97	-	.	Parent=Dv_FBgn0209229.1.mrna1;Target=Dv_FBgn0209229.1 158 243 +
Chr2	stalkie_big_nohaplotig	exon	48067482	48067638	98	-	.	Parent=Dv_FBgn0209229.1.mrna1;Target=Dv_FBgn0209229.1 1 157 +
Chr2	stalkie_big_nohaplotig	CDS	48067324	48067409	.	-	2	Parent=Dv_FBgn0209229.1.mrna1;Target=Dv_FBgn0209229.1 158 243 +
Chr2	stalkie_big_nohaplotig	CDS	48067482	48067638	.	-	0	Parent=Dv_FBgn0209229.1.mrna1;Target=Dv_FBgn0209229.1 1 157 +
Chr2	gffcl	locus	48068176	48069695	.	-	.	ID=RLOC_00017156;geneIDs=FBgn0069913.1.path2;transcripts=FBgn0069913.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	48068176	48069695	.	-	.	ID=FBgn0069913.1.mrna2;geneID=FBgn0069913.1.path2;Name=FBgn0069913.1;Dir=sensecoverage=100.0;identity=99.2;matches=1295;mismatches=10;indels=0;unknowns=0;locus=RLOC_00017156
Chr2	stalkie_big_nohaplotig	exon	48068176	48068767	98	-	.	Parent=FBgn0069913.1.mrna2;Target=FBgn0069913.1 714 1305 +
Chr2	stalkie_big_nohaplotig	exon	48068983	48069695	99	-	.	Parent=FBgn0069913.1.mrna2;Target=FBgn0069913.1 1 713 +
Chr2	stalkie_big_nohaplotig	CDS	48068176	48068767	.	-	1	Parent=FBgn0069913.1.mrna2;Target=FBgn0069913.1 714 1305 +
Chr2	stalkie_big_nohaplotig	CDS	48068983	48069695	.	-	0	Parent=FBgn0069913.1.mrna2;Target=FBgn0069913.1 1 713 +
Chr2	gffcl	locus	48097978	48098497	.	-	.	ID=RLOC_00017157;geneIDs=comp148871_c0_seq1.path1;transcripts=comp148871_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48097978	48098497	.	-	.	ID=comp148871_c0_seq1.mrna1;geneID=comp148871_c0_seq1.path1;Name=comp148871_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.4;matches=505;mismatches=15;indels=4;unknowns=0;Target=comp148871_c0_seq1 524 1 .;CDS_Target=comp148871_c0_seq1 350 186 .;locus=RLOC_00017157
Chr2	stalkie_big_nohaplotig	exon	48097978	48098497	96	-	.	Parent=comp148871_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	48098152	48098316	.	-	0	Parent=comp148871_c0_seq1.mrna1
Chr2	gffcl	locus	48214869	50147570	.	-	.	ID=RLOC_00017158;geneIDs=comp158052_c1_seq1.path1;transcripts=comp158052_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48214869	50147570	.	-	.	ID=comp158052_c1_seq1.mrna1;geneID=comp158052_c1_seq1.path1;Name=comp158052_c1_seq1;Dir=indeterminatecoverage=96.1;identity=88.7;matches=680;mismatches=20;indels=67;unknowns=0;Target=comp158052_c1_seq1 691 632 .;locus=RLOC_00017158
Chr2	stalkie_big_nohaplotig	exon	48214869	48214877	100	-	.	Parent=comp158052_c1_seq1.mrna1;Target=comp158052_c1_seq1 750 742 .
Chr2	stalkie_big_nohaplotig	exon	48227205	48227206	100	-	.	Parent=comp158052_c1_seq1.mrna1;Target=comp158052_c1_seq1 741 740 .
Chr2	stalkie_big_nohaplotig	exon	48234506	48234510	100	-	.	Parent=comp158052_c1_seq1.mrna1;Target=comp158052_c1_seq1 739 735 .
Chr2	stalkie_big_nohaplotig	exon	48236315	48236316	100	-	.	Parent=comp158052_c1_seq1.mrna1;Target=comp158052_c1_seq1 734 733 .
Chr2	stalkie_big_nohaplotig	exon	48258371	48258375	100	-	.	Parent=comp158052_c1_seq1.mrna1;Target=comp158052_c1_seq1 732 728 .
Chr2	stalkie_big_nohaplotig	exon	48262102	48262107	66	-	.	Parent=comp158052_c1_seq1.mrna1;Target=comp158052_c1_seq1 727 722 .
Chr2	stalkie_big_nohaplotig	exon	48268580	48268582	100	-	.	Parent=comp158052_c1_seq1.mrna1;Target=comp158052_c1_seq1 721 719 .
Chr2	stalkie_big_nohaplotig	exon	48273107	48273109	100	-	.	Parent=comp158052_c1_seq1.mrna1;Target=comp158052_c1_seq1 718 716 .
Chr2	stalkie_big_nohaplotig	exon	50146884	50147570	88	-	.	Parent=comp158052_c1_seq1.mrna1;Target=comp158052_c1_seq1 715 6 .
Chr2	stalkie_big_nohaplotig	CDS	50146908	50146962	.	-	0	Parent=comp158052_c1_seq1.mrna1
Chr2	gffcl	locus	48305283	48349521	.	+	.	ID=RLOC_00017159;geneIDs=FBgn0020521.1.path1;transcripts=FBgn0020521.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48305283	48349521	.	+	.	ID=FBgn0020521.1.mrna1;geneID=FBgn0020521.1.path1;Name=FBgn0020521.1;Dir=sensecoverage=98.2;identity=99.9;matches=1389;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017159
Chr2	stalkie_big_nohaplotig	exon	48305283	48305332	100	+	.	Parent=FBgn0020521.1.mrna1;Target=FBgn0020521.1 26 75 +
Chr2	stalkie_big_nohaplotig	exon	48308409	48308451	100	+	.	Parent=FBgn0020521.1.mrna1;Target=FBgn0020521.1 76 118 +
Chr2	stalkie_big_nohaplotig	exon	48321222	48321426	99	+	.	Parent=FBgn0020521.1.mrna1;Target=FBgn0020521.1 119 323 +
Chr2	stalkie_big_nohaplotig	exon	48321630	48321696	100	+	.	Parent=FBgn0020521.1.mrna1;Target=FBgn0020521.1 324 390 +
Chr2	stalkie_big_nohaplotig	exon	48346822	48347339	99	+	.	Parent=FBgn0020521.1.mrna1;Target=FBgn0020521.1 391 908 +
Chr2	stalkie_big_nohaplotig	exon	48348750	48348909	100	+	.	Parent=FBgn0020521.1.mrna1;Target=FBgn0020521.1 909 1068 +
Chr2	stalkie_big_nohaplotig	exon	48349108	48349260	100	+	.	Parent=FBgn0020521.1.mrna1;Target=FBgn0020521.1 1069 1221 +
Chr2	stalkie_big_nohaplotig	exon	48349327	48349521	100	+	.	Parent=FBgn0020521.1.mrna1;Target=FBgn0020521.1 1222 1416 +
Chr2	stalkie_big_nohaplotig	CDS	48305285	48305332	.	+	0	Parent=FBgn0020521.1.mrna1;Target=FBgn0020521.1 28 75 +
Chr2	stalkie_big_nohaplotig	CDS	48308409	48308451	.	+	0	Parent=FBgn0020521.1.mrna1;Target=FBgn0020521.1 76 118 +
Chr2	stalkie_big_nohaplotig	CDS	48321222	48321426	.	+	2	Parent=FBgn0020521.1.mrna1;Target=FBgn0020521.1 119 323 +
Chr2	stalkie_big_nohaplotig	CDS	48321630	48321696	.	+	1	Parent=FBgn0020521.1.mrna1;Target=FBgn0020521.1 324 390 +
Chr2	stalkie_big_nohaplotig	CDS	48346822	48347339	.	+	0	Parent=FBgn0020521.1.mrna1;Target=FBgn0020521.1 391 908 +
Chr2	stalkie_big_nohaplotig	CDS	48348750	48348909	.	+	1	Parent=FBgn0020521.1.mrna1;Target=FBgn0020521.1 909 1068 +
Chr2	stalkie_big_nohaplotig	CDS	48349108	48349260	.	+	0	Parent=FBgn0020521.1.mrna1;Target=FBgn0020521.1 1069 1221 +
Chr2	stalkie_big_nohaplotig	CDS	48349327	48349521	.	+	0	Parent=FBgn0020521.1.mrna1;Target=FBgn0020521.1 1222 1416 +
Chr2	gffcl	locus	48318324	48320721	.	-	.	ID=RLOC_00017160;geneIDs=FBgn0053126.2.path1;transcripts=FBgn0053126.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48318324	48320721	.	-	.	ID=FBgn0053126.2.mrna1;geneID=FBgn0053126.2.path1;Name=FBgn0053126.2;Dir=sensecoverage=100.0;identity=99.2;matches=637;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017160
Chr2	stalkie_big_nohaplotig	exon	48318324	48318454	100	-	.	Parent=FBgn0053126.2.mrna1;Target=FBgn0053126.2 512 642 +
Chr2	stalkie_big_nohaplotig	exon	48318576	48318751	99	-	.	Parent=FBgn0053126.2.mrna1;Target=FBgn0053126.2 336 511 +
Chr2	stalkie_big_nohaplotig	exon	48318826	48318956	99	-	.	Parent=FBgn0053126.2.mrna1;Target=FBgn0053126.2 205 335 +
Chr2	stalkie_big_nohaplotig	exon	48320447	48320567	97	-	.	Parent=FBgn0053126.2.mrna1;Target=FBgn0053126.2 84 204 +
Chr2	stalkie_big_nohaplotig	exon	48320639	48320721	100	-	.	Parent=FBgn0053126.2.mrna1;Target=FBgn0053126.2 1 83 +
Chr2	stalkie_big_nohaplotig	CDS	48318324	48318454	.	-	2	Parent=FBgn0053126.2.mrna1;Target=FBgn0053126.2 512 642 +
Chr2	stalkie_big_nohaplotig	CDS	48318576	48318751	.	-	1	Parent=FBgn0053126.2.mrna1;Target=FBgn0053126.2 336 511 +
Chr2	stalkie_big_nohaplotig	CDS	48318826	48318956	.	-	0	Parent=FBgn0053126.2.mrna1;Target=FBgn0053126.2 205 335 +
Chr2	stalkie_big_nohaplotig	CDS	48320447	48320567	.	-	1	Parent=FBgn0053126.2.mrna1;Target=FBgn0053126.2 84 204 +
Chr2	stalkie_big_nohaplotig	CDS	48320639	48320721	.	-	0	Parent=FBgn0053126.2.mrna1;Target=FBgn0053126.2 1 83 +
Chr2	gffcl	locus	48319094	48319449	.	+	.	ID=RLOC_00017161;geneIDs=comp67289_c0_seq1.path1;transcripts=comp67289_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48319094	48319449	.	+	.	ID=comp67289_c0_seq1.mrna1;geneID=comp67289_c0_seq1.path1;Name=comp67289_c0_seq1;Dir=indeterminatecoverage=88.4;identity=93.5;matches=333;mismatches=17;indels=6;unknowns=0;Target=comp67289_c0_seq1 394 45 .;CDS_Target=comp67289_c0_seq1 59 45 .;locus=RLOC_00017161
Chr2	stalkie_big_nohaplotig	exon	48319094	48319449	93	+	.	Parent=comp67289_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	48319094	48319108	.	+	0	Parent=comp67289_c0_seq1.mrna1
Chr2	gffcl	locus	48319458	48320083	.	+	.	ID=RLOC_00017162;geneIDs=comp156059_c2_seq1.path2;transcripts=comp156059_c2_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	48319458	48320083	.	+	.	ID=comp156059_c2_seq1.mrna2;geneID=comp156059_c2_seq1.path2;Name=comp156059_c2_seq1;Dir=indeterminatecoverage=63.4;identity=92.7;matches=583;mismatches=42;indels=4;unknowns=0;Target=comp156059_c2_seq1 989 362 .;CDS_Target=comp156059_c2_seq1 463 362 .;locus=RLOC_00017162
Chr2	stalkie_big_nohaplotig	exon	48319458	48320083	92	+	.	Parent=comp156059_c2_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	48319458	48319559	.	+	0	Parent=comp156059_c2_seq1.mrna2
Chr2	gffcl	locus	48359158	48359472	.	-	.	ID=RLOC_00017163;geneIDs=Dv_FBgn0209229.1.path2;transcripts=Dv_FBgn0209229.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	48359158	48359472	.	-	.	ID=Dv_FBgn0209229.1.mrna2;geneID=Dv_FBgn0209229.1.path2;Name=Dv_FBgn0209229.1;Dir=sensecoverage=100.0;identity=97.9;matches=238;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017163
Chr2	stalkie_big_nohaplotig	exon	48359158	48359243	97	-	.	Parent=Dv_FBgn0209229.1.mrna2;Target=Dv_FBgn0209229.1 158 243 +
Chr2	stalkie_big_nohaplotig	exon	48359316	48359472	98	-	.	Parent=Dv_FBgn0209229.1.mrna2;Target=Dv_FBgn0209229.1 1 157 +
Chr2	stalkie_big_nohaplotig	CDS	48359158	48359243	.	-	2	Parent=Dv_FBgn0209229.1.mrna2;Target=Dv_FBgn0209229.1 158 243 +
Chr2	stalkie_big_nohaplotig	CDS	48359316	48359472	.	-	0	Parent=Dv_FBgn0209229.1.mrna2;Target=Dv_FBgn0209229.1 1 157 +
Chr2	gffcl	locus	48360010	48361529	.	-	.	ID=RLOC_00017164;geneIDs=FBgn0069913.1.path1;transcripts=FBgn0069913.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48360010	48361529	.	-	.	ID=FBgn0069913.1.mrna1;geneID=FBgn0069913.1.path1;Name=FBgn0069913.1;Dir=sensecoverage=100.0;identity=99.3;matches=1296;mismatches=9;indels=0;unknowns=0;locus=RLOC_00017164
Chr2	stalkie_big_nohaplotig	exon	48360010	48360601	98	-	.	Parent=FBgn0069913.1.mrna1;Target=FBgn0069913.1 714 1305 +
Chr2	stalkie_big_nohaplotig	exon	48360817	48361529	99	-	.	Parent=FBgn0069913.1.mrna1;Target=FBgn0069913.1 1 713 +
Chr2	stalkie_big_nohaplotig	CDS	48360010	48360601	.	-	1	Parent=FBgn0069913.1.mrna1;Target=FBgn0069913.1 714 1305 +
Chr2	stalkie_big_nohaplotig	CDS	48360817	48361529	.	-	0	Parent=FBgn0069913.1.mrna1;Target=FBgn0069913.1 1 713 +
Chr2	gffcl	locus	48398355	48400586	.	+	.	ID=RLOC_00017165;geneIDs=FBgn0028473.1.path1;transcripts=FBgn0028473.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48398355	48400586	.	+	.	ID=FBgn0028473.1.mrna1;geneID=FBgn0028473.1.path1;Name=FBgn0028473.1;Dir=sensecoverage=100.0;identity=99.3;matches=1948;mismatches=14;indels=0;unknowns=0;locus=RLOC_00017165
Chr2	stalkie_big_nohaplotig	exon	48398355	48398408	100	+	.	Parent=FBgn0028473.1.mrna1;Target=FBgn0028473.1 1 54 +
Chr2	stalkie_big_nohaplotig	exon	48398560	48398834	98	+	.	Parent=FBgn0028473.1.mrna1;Target=FBgn0028473.1 55 329 +
Chr2	stalkie_big_nohaplotig	exon	48398893	48399223	100	+	.	Parent=FBgn0028473.1.mrna1;Target=FBgn0028473.1 330 660 +
Chr2	stalkie_big_nohaplotig	exon	48399285	48400586	99	+	.	Parent=FBgn0028473.1.mrna1;Target=FBgn0028473.1 661 1962 +
Chr2	stalkie_big_nohaplotig	CDS	48398355	48398408	.	+	0	Parent=FBgn0028473.1.mrna1;Target=FBgn0028473.1 1 54 +
Chr2	stalkie_big_nohaplotig	CDS	48398560	48398834	.	+	0	Parent=FBgn0028473.1.mrna1;Target=FBgn0028473.1 55 329 +
Chr2	stalkie_big_nohaplotig	CDS	48398893	48399223	.	+	1	Parent=FBgn0028473.1.mrna1;Target=FBgn0028473.1 330 660 +
Chr2	stalkie_big_nohaplotig	CDS	48399285	48400586	.	+	0	Parent=FBgn0028473.1.mrna1;Target=FBgn0028473.1 661 1962 +
Chr2	gffcl	locus	48409444	48409981	.	+	.	ID=RLOC_00017166;geneIDs=comp150848_c2_seq1.path1;transcripts=comp150848_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48409444	48409981	.	+	.	ID=comp150848_c2_seq1.mrna1;geneID=comp150848_c2_seq1.path1;Name=comp150848_c2_seq1;Dir=indeterminatecoverage=99.8;identity=98.5;matches=530;mismatches=8;indels=0;unknowns=0;Target=comp150848_c2_seq1 538 1 .;CDS_Target=comp150848_c2_seq1 225 1 .;locus=RLOC_00017166
Chr2	stalkie_big_nohaplotig	exon	48409444	48409981	98	+	.	Parent=comp150848_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	48409444	48409668	.	+	0	Parent=comp150848_c2_seq1.mrna1
Chr2	gffcl	locus	48460362	48464238	.	-	.	ID=RLOC_00017168;geneIDs=comp148042_c0_seq1.path1;transcripts=comp148042_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48460362	48464238	.	-	.	ID=comp148042_c0_seq1.mrna1;geneID=comp148042_c0_seq1.path1;Name=comp148042_c0_seq1;Dir=antisensecoverage=98.5;identity=99.9;matches=744;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017168
Chr2	stalkie_big_nohaplotig	exon	48460362	48460885	99	-	.	Parent=comp148042_c0_seq1.mrna1;Target=comp148042_c0_seq1 1 524 -
Chr2	stalkie_big_nohaplotig	exon	48464018	48464238	100	-	.	Parent=comp148042_c0_seq1.mrna1;Target=comp148042_c0_seq1 525 745 -
Chr2	stalkie_big_nohaplotig	CDS	48460541	48460885	.	-	0	Parent=comp148042_c0_seq1.mrna1;Target=comp148042_c0_seq1 180 524 .
Chr2	stalkie_big_nohaplotig	CDS	48464018	48464026	.	-	0	Parent=comp148042_c0_seq1.mrna1;Target=comp148042_c0_seq1 525 533 .
Chr2	gffcl	locus	48473536	48474543	.	+	.	ID=RLOC_00017169;geneIDs=comp145916_c0_seq1.path1;transcripts=comp145916_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48473536	48474543	.	+	.	ID=comp145916_c0_seq1.mrna1;geneID=comp145916_c0_seq1.path1;Name=comp145916_c0_seq1;Dir=sensecoverage=69.1;identity=97.9;matches=776;mismatches=8;indels=9;unknowns=100;locus=RLOC_00017169
Chr2	stalkie_big_nohaplotig	exon	48473536	48473882	98	+	.	Parent=comp145916_c0_seq1.mrna1;Target=comp145916_c0_seq1 1 348 +
Chr2	stalkie_big_nohaplotig	exon	48474001	48474543	97	+	.	Parent=comp145916_c0_seq1.mrna1;Target=comp145916_c0_seq1 349 887 +
Chr2	stalkie_big_nohaplotig	CDS	48473859	48473882	.	+	0	Parent=comp145916_c0_seq1.mrna1;Target=comp145916_c0_seq1 325 348 +
Chr2	stalkie_big_nohaplotig	CDS	48474001	48474541	.	+	0	Parent=comp145916_c0_seq1.mrna1;Target=comp145916_c0_seq1 349 885 +
Chr2	gffcl	locus	48577870	48579271	.	-	.	ID=RLOC_00017170;geneIDs=FBgn0015829.3.path1;transcripts=FBgn0015829.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48577870	48579271	.	-	.	ID=FBgn0015829.3.mrna1;geneID=FBgn0015829.3.path1;Name=FBgn0015829.3;Dir=sensecoverage=97.7;identity=95.3;matches=848;mismatches=40;indels=2;unknowns=0;Target=FBgn0015829.3 24 35 +;locus=RLOC_00017170
Chr2	stalkie_big_nohaplotig	exon	48577870	48577898	89	-	.	Parent=FBgn0015829.3.mrna1;Target=FBgn0015829.3 881 909 +
Chr2	stalkie_big_nohaplotig	exon	48577999	48578151	92	-	.	Parent=FBgn0015829.3.mrna1;Target=FBgn0015829.3 728 880 +
Chr2	stalkie_big_nohaplotig	exon	48578227	48578314	98	-	.	Parent=FBgn0015829.3.mrna1;Target=FBgn0015829.3 640 727 +
Chr2	stalkie_big_nohaplotig	exon	48578387	48578680	95	-	.	Parent=FBgn0015829.3.mrna1;Target=FBgn0015829.3 346 639 +
Chr2	stalkie_big_nohaplotig	exon	48578739	48578907	95	-	.	Parent=FBgn0015829.3.mrna1;Target=FBgn0015829.3 177 345 +
Chr2	stalkie_big_nohaplotig	exon	48579044	48579118	98	-	.	Parent=FBgn0015829.3.mrna1;Target=FBgn0015829.3 102 176 +
Chr2	stalkie_big_nohaplotig	exon	48579190	48579271	93	-	.	Parent=FBgn0015829.3.mrna1;Target=FBgn0015829.3 22 101 +
Chr2	stalkie_big_nohaplotig	CDS	48579256	48579269	.	-	0	Parent=FBgn0015829.3.mrna1
Chr2	gffcl	locus	48585979	48587385	.	-	.	ID=RLOC_00017171;geneIDs=FBgn0032586.1.path1;transcripts=FBgn0032586.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48585979	48587385	.	-	.	ID=FBgn0032586.1.mrna1;geneID=FBgn0032586.1.path1;Name=FBgn0032586.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1397;mismatches=10;indels=0;unknowns=0;Target=FBgn0032586.1 1407 1 .;locus=RLOC_00017171
Chr2	stalkie_big_nohaplotig	exon	48585979	48587385	99	-	.	Parent=FBgn0032586.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	48585979	48587385	.	-	0	Parent=FBgn0032586.1.mrna1
Chr2	gffcl	locus	48594507	48624583	.	+	.	ID=RLOC_00017172;geneIDs=comp161078_c0_seq1.path1;transcripts=comp161078_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48594507	48624583	.	+	.	ID=comp161078_c0_seq1.mrna1;geneID=comp161078_c0_seq1.path1;Name=comp161078_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.4;matches=2458;mismatches=125;indels=107;unknowns=0;Target=comp161078_c0_seq1 853 698 .;locus=RLOC_00017172
Chr2	stalkie_big_nohaplotig	exon	48594507	48594526	100	+	.	Parent=comp161078_c0_seq1.mrna1;Target=comp161078_c0_seq1 20 1 .
Chr2	stalkie_big_nohaplotig	exon	48599632	48599633	100	+	.	Parent=comp161078_c0_seq1.mrna1;Target=comp161078_c0_seq1 22 21 .
Chr2	stalkie_big_nohaplotig	exon	48603541	48603543	100	+	.	Parent=comp161078_c0_seq1.mrna1;Target=comp161078_c0_seq1 25 23 .
Chr2	stalkie_big_nohaplotig	exon	48608418	48608422	80	+	.	Parent=comp161078_c0_seq1.mrna1;Target=comp161078_c0_seq1 30 26 .
Chr2	stalkie_big_nohaplotig	exon	48609798	48609805	87	+	.	Parent=comp161078_c0_seq1.mrna1;Target=comp161078_c0_seq1 38 31 .
Chr2	stalkie_big_nohaplotig	exon	48622010	48624583	91	+	.	Parent=comp161078_c0_seq1.mrna1;Target=comp161078_c0_seq1 2661 39 .
Chr2	stalkie_big_nohaplotig	CDS	48622654	48622806	.	+	0	Parent=comp161078_c0_seq1.mrna1
Chr2	gffcl	locus	48618421	48619150	.	+	.	ID=RLOC_00017173;geneIDs=comp161871_c0_seq1.path1;transcripts=comp161871_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48618421	48619150	.	+	.	ID=comp161871_c0_seq1.mrna1;geneID=comp161871_c0_seq1.path1;Name=comp161871_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=720;mismatches=10;indels=0;unknowns=0;Target=comp161871_c0_seq1 730 1 .;CDS_Target=comp161871_c0_seq1 100 2 .;locus=RLOC_00017173
Chr2	stalkie_big_nohaplotig	exon	48618421	48619150	98	+	.	Parent=comp161871_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	48618422	48618520	.	+	0	Parent=comp161871_c0_seq1.mrna1
Chr2	gffcl	locus	48657605	48658455	.	+	.	ID=RLOC_00017175;geneIDs=comp143405_c0_seq1.path1;transcripts=comp143405_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48657605	48658455	.	+	.	ID=comp143405_c0_seq1.mrna1;geneID=comp143405_c0_seq1.path1;Name=comp143405_c0_seq1;Dir=antisensecoverage=99.7;identity=96.4;matches=719;mismatches=13;indels=14;unknowns=0;locus=RLOC_00017175
Chr2	stalkie_big_nohaplotig	exon	48657605	48657803	98	+	.	Parent=comp143405_c0_seq1.mrna1;Target=comp143405_c0_seq1 545 742 -
Chr2	stalkie_big_nohaplotig	exon	48657858	48657933	98	+	.	Parent=comp143405_c0_seq1.mrna1;Target=comp143405_c0_seq1 469 544 -
Chr2	stalkie_big_nohaplotig	exon	48657994	48658455	95	+	.	Parent=comp143405_c0_seq1.mrna1;Target=comp143405_c0_seq1 2 468 -
Chr2	stalkie_big_nohaplotig	CDS	48657757	48657803	.	+	0	Parent=comp143405_c0_seq1.mrna1;Target=comp143405_c0_seq1 545 591 .
Chr2	stalkie_big_nohaplotig	CDS	48657858	48657933	.	+	1	Parent=comp143405_c0_seq1.mrna1;Target=comp143405_c0_seq1 469 544 .
Chr2	stalkie_big_nohaplotig	CDS	48657994	48658170	.	+	0	Parent=comp143405_c0_seq1.mrna1;Target=comp143405_c0_seq1 292 468 .
Chr2	gffcl	locus	48670405	48671811	.	+	.	ID=RLOC_00017176;geneIDs=ORF823.path1;transcripts=ORF823.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48670405	48671811	.	+	.	ID=ORF823.mrna1;geneID=ORF823.path1;Name=ORF823;Dir=indeterminatecoverage=100.0;identity=98.4;matches=1385;mismatches=22;indels=0;unknowns=0;Target=ORF823 1407 1 .;locus=RLOC_00017176
Chr2	stalkie_big_nohaplotig	exon	48670405	48671811	98	+	.	Parent=ORF823.mrna1
Chr2	stalkie_big_nohaplotig	CDS	48670405	48671811	.	+	0	Parent=ORF823.mrna1
Chr2	gffcl	locus	48743670	48744119	.	-	.	ID=RLOC_00017177;geneIDs=comp117576_c0_seq1.path1;transcripts=comp117576_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48743670	48744119	.	-	.	ID=comp117576_c0_seq1.mrna1;geneID=comp117576_c0_seq1.path1;Name=comp117576_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=447;mismatches=3;indels=2;unknowns=0;Target=comp117576_c0_seq1 452 1 .;CDS_Target=comp117576_c0_seq1 88 2 .;locus=RLOC_00017177
Chr2	stalkie_big_nohaplotig	exon	48743670	48744119	98	-	.	Parent=comp117576_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	48744034	48744118	.	-	0	Parent=comp117576_c0_seq1.mrna1
Chr2	gffcl	locus	48915132	48916579	.	+	.	ID=RLOC_00017178;geneIDs=FBgn0015829.4.path1;transcripts=FBgn0015829.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48915132	48916579	.	+	.	ID=FBgn0015829.4.mrna1;geneID=FBgn0015829.4.path1;Name=FBgn0015829.4;Dir=sensecoverage=100.0;identity=99.6;matches=932;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017178
Chr2	stalkie_big_nohaplotig	exon	48915132	48915277	100	+	.	Parent=FBgn0015829.4.mrna1;Target=FBgn0015829.4 1 146 +
Chr2	stalkie_big_nohaplotig	exon	48915333	48915407	100	+	.	Parent=FBgn0015829.4.mrna1;Target=FBgn0015829.4 147 221 +
Chr2	stalkie_big_nohaplotig	exon	48915553	48915703	100	+	.	Parent=FBgn0015829.4.mrna1;Target=FBgn0015829.4 222 372 +
Chr2	stalkie_big_nohaplotig	exon	48915759	48916052	99	+	.	Parent=FBgn0015829.4.mrna1;Target=FBgn0015829.4 373 666 +
Chr2	stalkie_big_nohaplotig	exon	48916127	48916214	100	+	.	Parent=FBgn0015829.4.mrna1;Target=FBgn0015829.4 667 754 +
Chr2	stalkie_big_nohaplotig	exon	48916293	48916445	98	+	.	Parent=FBgn0015829.4.mrna1;Target=FBgn0015829.4 755 907 +
Chr2	stalkie_big_nohaplotig	exon	48916551	48916579	100	+	.	Parent=FBgn0015829.4.mrna1;Target=FBgn0015829.4 908 936 +
Chr2	stalkie_big_nohaplotig	CDS	48915132	48915277	.	+	0	Parent=FBgn0015829.4.mrna1;Target=FBgn0015829.4 1 146 +
Chr2	stalkie_big_nohaplotig	CDS	48915333	48915407	.	+	1	Parent=FBgn0015829.4.mrna1;Target=FBgn0015829.4 147 221 +
Chr2	stalkie_big_nohaplotig	CDS	48915553	48915703	.	+	1	Parent=FBgn0015829.4.mrna1;Target=FBgn0015829.4 222 372 +
Chr2	stalkie_big_nohaplotig	CDS	48915759	48916052	.	+	0	Parent=FBgn0015829.4.mrna1;Target=FBgn0015829.4 373 666 +
Chr2	stalkie_big_nohaplotig	CDS	48916127	48916214	.	+	0	Parent=FBgn0015829.4.mrna1;Target=FBgn0015829.4 667 754 +
Chr2	stalkie_big_nohaplotig	CDS	48916293	48916445	.	+	2	Parent=FBgn0015829.4.mrna1;Target=FBgn0015829.4 755 907 +
Chr2	stalkie_big_nohaplotig	CDS	48916551	48916579	.	+	2	Parent=FBgn0015829.4.mrna1;Target=FBgn0015829.4 908 936 +
Chr2	gffcl	locus	48944443	48944577	.	+	.	ID=RLOC_00017179;geneIDs=comp146494_c1_seq1.path1;transcripts=comp146494_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48944443	48944577	.	+	.	ID=comp146494_c1_seq1.mrna1;geneID=comp146494_c1_seq1.path1;Name=comp146494_c1_seq1;Dir=indeterminatecoverage=54.4;identity=97.0;matches=131;mismatches=4;indels=0;unknowns=0;Target=comp146494_c1_seq1 164 30 .;CDS_Target=comp146494_c1_seq1 162 31 .;locus=RLOC_00017179
Chr2	stalkie_big_nohaplotig	exon	48944443	48944577	97	+	.	Parent=comp146494_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	48944444	48944575	.	+	0	Parent=comp146494_c1_seq1.mrna1
Chr2	gffcl	locus	48945916	48959370	.	-	.	ID=RLOC_00017180;geneIDs=FBgn0034275.1.path1;transcripts=FBgn0034275.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48945916	48959370	.	-	.	ID=FBgn0034275.1.mrna1;geneID=FBgn0034275.1.path1;Name=FBgn0034275.1;Dir=sensecoverage=100.0;identity=99.2;matches=1687;mismatches=13;indels=1;unknowns=0;locus=RLOC_00017180
Chr2	stalkie_big_nohaplotig	exon	48945916	48946016	99	-	.	Parent=FBgn0034275.1.mrna1;Target=FBgn0034275.1 1600 1701 +
Chr2	stalkie_big_nohaplotig	exon	48946227	48946403	99	-	.	Parent=FBgn0034275.1.mrna1;Target=FBgn0034275.1 1423 1599 +
Chr2	stalkie_big_nohaplotig	exon	48946460	48946605	100	-	.	Parent=FBgn0034275.1.mrna1;Target=FBgn0034275.1 1277 1422 +
Chr2	stalkie_big_nohaplotig	exon	48946664	48946804	100	-	.	Parent=FBgn0034275.1.mrna1;Target=FBgn0034275.1 1136 1276 +
Chr2	stalkie_big_nohaplotig	exon	48947794	48947955	100	-	.	Parent=FBgn0034275.1.mrna1;Target=FBgn0034275.1 974 1135 +
Chr2	stalkie_big_nohaplotig	exon	48948032	48948335	98	-	.	Parent=FBgn0034275.1.mrna1;Target=FBgn0034275.1 670 973 +
Chr2	stalkie_big_nohaplotig	exon	48948399	48948514	96	-	.	Parent=FBgn0034275.1.mrna1;Target=FBgn0034275.1 554 669 +
Chr2	stalkie_big_nohaplotig	exon	48948598	48948822	98	-	.	Parent=FBgn0034275.1.mrna1;Target=FBgn0034275.1 329 553 +
Chr2	stalkie_big_nohaplotig	exon	48948910	48949206	99	-	.	Parent=FBgn0034275.1.mrna1;Target=FBgn0034275.1 32 328 +
Chr2	stalkie_big_nohaplotig	exon	48959340	48959370	100	-	.	Parent=FBgn0034275.1.mrna1;Target=FBgn0034275.1 1 31 +
Chr2	stalkie_big_nohaplotig	CDS	48945916	48946016	.	-	0	Parent=FBgn0034275.1.mrna1;Target=FBgn0034275.1 1600 1701 +
Chr2	stalkie_big_nohaplotig	CDS	48946227	48946403	.	-	0	Parent=FBgn0034275.1.mrna1;Target=FBgn0034275.1 1423 1599 +
Chr2	stalkie_big_nohaplotig	CDS	48946460	48946605	.	-	2	Parent=FBgn0034275.1.mrna1;Target=FBgn0034275.1 1277 1422 +
Chr2	stalkie_big_nohaplotig	CDS	48946664	48946804	.	-	2	Parent=FBgn0034275.1.mrna1;Target=FBgn0034275.1 1136 1276 +
Chr2	stalkie_big_nohaplotig	CDS	48947794	48947955	.	-	2	Parent=FBgn0034275.1.mrna1;Target=FBgn0034275.1 974 1135 +
Chr2	stalkie_big_nohaplotig	CDS	48948032	48948335	.	-	0	Parent=FBgn0034275.1.mrna1;Target=FBgn0034275.1 670 973 +
Chr2	stalkie_big_nohaplotig	CDS	48948399	48948514	.	-	2	Parent=FBgn0034275.1.mrna1;Target=FBgn0034275.1 554 669 +
Chr2	stalkie_big_nohaplotig	CDS	48948598	48948822	.	-	2	Parent=FBgn0034275.1.mrna1;Target=FBgn0034275.1 329 553 +
Chr2	stalkie_big_nohaplotig	CDS	48948910	48949206	.	-	2	Parent=FBgn0034275.1.mrna1;Target=FBgn0034275.1 32 328 +
Chr2	stalkie_big_nohaplotig	CDS	48959340	48959370	.	-	0	Parent=FBgn0034275.1.mrna1;Target=FBgn0034275.1 1 31 +
Chr2	gffcl	locus	48990147	48991047	.	-	.	ID=RLOC_00017181;geneIDs=FBgn0034766.1.path1;transcripts=FBgn0034766.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	48990147	48991047	.	-	.	ID=FBgn0034766.1.mrna1;geneID=FBgn0034766.1.path1;Name=FBgn0034766.1;Dir=sensecoverage=99.9;identity=98.7;matches=807;mismatches=11;indels=0;unknowns=0;locus=RLOC_00017181
Chr2	stalkie_big_nohaplotig	exon	48990147	48990380	99	-	.	Parent=FBgn0034766.1.mrna1;Target=FBgn0034766.1 586 819 +
Chr2	stalkie_big_nohaplotig	exon	48990464	48991047	98	-	.	Parent=FBgn0034766.1.mrna1;Target=FBgn0034766.1 2 585 +
Chr2	stalkie_big_nohaplotig	CDS	48990147	48990380	.	-	0	Parent=FBgn0034766.1.mrna1;Target=FBgn0034766.1 586 819 +
Chr2	stalkie_big_nohaplotig	CDS	48990464	48991045	.	-	0	Parent=FBgn0034766.1.mrna1;Target=FBgn0034766.1 4 585 +
Chr2	gffcl	locus	49099078	49099851	.	+	.	ID=RLOC_00017182;geneIDs=comp145898_c0_seq1.path1;transcripts=comp145898_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49099078	49099851	.	+	.	ID=comp145898_c0_seq1.mrna1;geneID=comp145898_c0_seq1.path1;Name=comp145898_c0_seq1;Dir=antisensecoverage=100.0;identity=98.8;matches=659;mismatches=7;indels=1;unknowns=0;locus=RLOC_00017182
Chr2	stalkie_big_nohaplotig	exon	49099078	49099570	99	+	.	Parent=comp145898_c0_seq1.mrna1;Target=comp145898_c0_seq1 174 667 -
Chr2	stalkie_big_nohaplotig	exon	49099679	49099851	96	+	.	Parent=comp145898_c0_seq1.mrna1;Target=comp145898_c0_seq1 1 173 -
Chr2	stalkie_big_nohaplotig	CDS	49099210	49099570	.	+	0	Parent=comp145898_c0_seq1.mrna1;Target=comp145898_c0_seq1 174 534 .
Chr2	stalkie_big_nohaplotig	CDS	49099679	49099701	.	+	2	Parent=comp145898_c0_seq1.mrna1;Target=comp145898_c0_seq1 151 173 .
Chr2	gffcl	locus	49102007	49105114	.	+	.	ID=RLOC_00017183;geneIDs=FBgn0035024.2.path1;transcripts=FBgn0035024.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49102007	49105114	.	+	.	ID=FBgn0035024.2.mrna1;geneID=FBgn0035024.2.path1;Name=FBgn0035024.2;Dir=sensecoverage=100.0;identity=99.0;matches=2638;mismatches=26;indels=0;unknowns=0;locus=RLOC_00017183
Chr2	stalkie_big_nohaplotig	exon	49102007	49102285	100	+	.	Parent=FBgn0035024.2.mrna1;Target=FBgn0035024.2 1 279 +
Chr2	stalkie_big_nohaplotig	exon	49102343	49102488	99	+	.	Parent=FBgn0035024.2.mrna1;Target=FBgn0035024.2 280 425 +
Chr2	stalkie_big_nohaplotig	exon	49102550	49102861	98	+	.	Parent=FBgn0035024.2.mrna1;Target=FBgn0035024.2 426 737 +
Chr2	stalkie_big_nohaplotig	exon	49102929	49103180	98	+	.	Parent=FBgn0035024.2.mrna1;Target=FBgn0035024.2 738 989 +
Chr2	stalkie_big_nohaplotig	exon	49103240	49103481	99	+	.	Parent=FBgn0035024.2.mrna1;Target=FBgn0035024.2 990 1231 +
Chr2	stalkie_big_nohaplotig	exon	49103554	49104584	98	+	.	Parent=FBgn0035024.2.mrna1;Target=FBgn0035024.2 1232 2262 +
Chr2	stalkie_big_nohaplotig	exon	49104650	49104847	100	+	.	Parent=FBgn0035024.2.mrna1;Target=FBgn0035024.2 2263 2460 +
Chr2	stalkie_big_nohaplotig	exon	49104911	49105114	98	+	.	Parent=FBgn0035024.2.mrna1;Target=FBgn0035024.2 2461 2664 +
Chr2	stalkie_big_nohaplotig	CDS	49102007	49102285	.	+	0	Parent=FBgn0035024.2.mrna1;Target=FBgn0035024.2 1 279 +
Chr2	stalkie_big_nohaplotig	CDS	49102343	49102488	.	+	0	Parent=FBgn0035024.2.mrna1;Target=FBgn0035024.2 280 425 +
Chr2	stalkie_big_nohaplotig	CDS	49102550	49102861	.	+	1	Parent=FBgn0035024.2.mrna1;Target=FBgn0035024.2 426 737 +
Chr2	stalkie_big_nohaplotig	CDS	49102929	49103180	.	+	1	Parent=FBgn0035024.2.mrna1;Target=FBgn0035024.2 738 989 +
Chr2	stalkie_big_nohaplotig	CDS	49103240	49103481	.	+	1	Parent=FBgn0035024.2.mrna1;Target=FBgn0035024.2 990 1231 +
Chr2	stalkie_big_nohaplotig	CDS	49103554	49104584	.	+	2	Parent=FBgn0035024.2.mrna1;Target=FBgn0035024.2 1232 2262 +
Chr2	stalkie_big_nohaplotig	CDS	49104650	49104847	.	+	0	Parent=FBgn0035024.2.mrna1;Target=FBgn0035024.2 2263 2460 +
Chr2	stalkie_big_nohaplotig	CDS	49104911	49105114	.	+	0	Parent=FBgn0035024.2.mrna1;Target=FBgn0035024.2 2461 2664 +
Chr2	gffcl	locus	49112687	49118723	.	-	.	ID=RLOC_00017184;geneIDs=FBgn0019972.2.path1,FBgn0019972.3.path1;transcripts=FBgn0019972.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49112687	49118607	.	-	.	ID=FBgn0019972.3.mrna1;geneID=FBgn0019972.3.path1;Name=FBgn0019972.3;Dir=sensecoverage=97.8;identity=97.1;matches=909;mismatches=15;indels=12;unknowns=0;locus=RLOC_00017184
Chr2	stalkie_big_nohaplotig	exon	49112687	49112922	100	-	.	Parent=FBgn0019972.3.mrna1;Target=FBgn0019972.3 689 924 +
Chr2	stalkie_big_nohaplotig	exon	49114903	49115208	99	-	.	Parent=FBgn0019972.3.mrna1;Target=FBgn0019972.3 383 688 +
Chr2	stalkie_big_nohaplotig	exon	49115296	49115558	93	-	.	Parent=FBgn0019972.3.mrna1;Target=FBgn0019972.3 132 382 +
Chr2	stalkie_big_nohaplotig	exon	49118477	49118607	93	-	.	Parent=FBgn0019972.3.mrna1;Target=FBgn0019972.3 1 131 +
Chr2	stalkie_big_nohaplotig	CDS	49112687	49112922	.	-	2	Parent=FBgn0019972.3.mrna1;Target=FBgn0019972.3 689 924 +
Chr2	stalkie_big_nohaplotig	CDS	49114903	49115208	.	-	2	Parent=FBgn0019972.3.mrna1;Target=FBgn0019972.3 383 688 +
Chr2	stalkie_big_nohaplotig	CDS	49115296	49115558	.	-	1	Parent=FBgn0019972.3.mrna1;Target=FBgn0019972.3 132 382 +
Chr2	stalkie_big_nohaplotig	CDS	49118477	49118607	.	-	0	Parent=FBgn0019972.3.mrna1;Target=FBgn0019972.3 1 131 +
Chr2	gffcl	locus	49128571	49131805	.	+	.	ID=RLOC_00017185;geneIDs=FBgn0034858.1.path1;transcripts=FBgn0034858.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49128571	49131805	.	+	.	ID=FBgn0034858.1.mrna1;geneID=FBgn0034858.1.path1;Name=FBgn0034858.1;Dir=sensecoverage=100.0;identity=98.7;matches=1454;mismatches=18;indels=1;unknowns=0;Target=FBgn0034858.1 3 71 +;locus=RLOC_00017185
Chr2	stalkie_big_nohaplotig	exon	49128571	49128773	96	+	.	Parent=FBgn0034858.1.mrna1;Target=FBgn0034858.1 1 204 +
Chr2	stalkie_big_nohaplotig	exon	49130336	49130734	99	+	.	Parent=FBgn0034858.1.mrna1;Target=FBgn0034858.1 205 603 +
Chr2	stalkie_big_nohaplotig	exon	49130797	49130976	100	+	.	Parent=FBgn0034858.1.mrna1;Target=FBgn0034858.1 604 783 +
Chr2	stalkie_big_nohaplotig	exon	49131044	49131171	99	+	.	Parent=FBgn0034858.1.mrna1;Target=FBgn0034858.1 784 911 +
Chr2	stalkie_big_nohaplotig	exon	49131244	49131805	98	+	.	Parent=FBgn0034858.1.mrna1;Target=FBgn0034858.1 912 1473 +
Chr2	stalkie_big_nohaplotig	CDS	49128573	49128640	.	+	0	Parent=FBgn0034858.1.mrna1
Chr2	gffcl	locus	49135150	49311829	.	-	.	ID=RLOC_00017186;geneIDs=FBgn0028497.1.path1,comp144534_c0_seq1.path1;transcripts=FBgn0028497.1.mrna1,comp144534_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49135150	49311456	.	-	.	ID=FBgn0028497.1.mrna1;geneID=FBgn0028497.1.path1;Name=FBgn0028497.1;Dir=sensecoverage=100.0;identity=99.2;matches=2350;mismatches=16;indels=3;unknowns=0;locus=RLOC_00017186
Chr2	stalkie_big_nohaplotig	exon	49135150	49135285	96	-	.	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 2233 2367 +
Chr2	stalkie_big_nohaplotig	exon	49137225	49137350	99	-	.	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 2107 2232 +
Chr2	stalkie_big_nohaplotig	exon	49137413	49137503	100	-	.	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 2016 2106 +
Chr2	stalkie_big_nohaplotig	exon	49137615	49137724	100	-	.	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 1906 2015 +
Chr2	stalkie_big_nohaplotig	exon	49137810	49137912	99	-	.	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 1803 1905 +
Chr2	stalkie_big_nohaplotig	exon	49138562	49138585	100	-	.	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 1779 1802 +
Chr2	stalkie_big_nohaplotig	exon	49138656	49139032	98	-	.	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 1402 1778 +
Chr2	stalkie_big_nohaplotig	exon	49139094	49139229	98	-	.	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 1266 1401 +
Chr2	stalkie_big_nohaplotig	exon	49142137	49142363	100	-	.	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 1039 1265 +
Chr2	stalkie_big_nohaplotig	exon	49142693	49142827	100	-	.	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 904 1038 +
Chr2	stalkie_big_nohaplotig	exon	49148462	49148745	99	-	.	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 620 903 +
Chr2	stalkie_big_nohaplotig	exon	49148909	49149071	100	-	.	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 457 619 +
Chr2	stalkie_big_nohaplotig	exon	49298428	49298544	100	-	.	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 340 456 +
Chr2	stalkie_big_nohaplotig	exon	49311118	49311456	99	-	.	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 1 339 +
Chr2	stalkie_big_nohaplotig	CDS	49135150	49135285	.	-	0	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 2233 2367 +
Chr2	stalkie_big_nohaplotig	CDS	49137225	49137350	.	-	0	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 2107 2232 +
Chr2	stalkie_big_nohaplotig	CDS	49137413	49137503	.	-	1	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 2016 2106 +
Chr2	stalkie_big_nohaplotig	CDS	49137615	49137724	.	-	0	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 1906 2015 +
Chr2	stalkie_big_nohaplotig	CDS	49137810	49137912	.	-	1	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 1803 1905 +
Chr2	stalkie_big_nohaplotig	CDS	49138562	49138585	.	-	1	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 1779 1802 +
Chr2	stalkie_big_nohaplotig	CDS	49138656	49139032	.	-	0	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 1402 1778 +
Chr2	stalkie_big_nohaplotig	CDS	49139094	49139229	.	-	1	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 1266 1401 +
Chr2	stalkie_big_nohaplotig	CDS	49142137	49142363	.	-	0	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 1039 1265 +
Chr2	stalkie_big_nohaplotig	CDS	49142693	49142827	.	-	0	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 904 1038 +
Chr2	stalkie_big_nohaplotig	CDS	49148462	49148745	.	-	2	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 620 903 +
Chr2	stalkie_big_nohaplotig	CDS	49148909	49149071	.	-	0	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 457 619 +
Chr2	stalkie_big_nohaplotig	CDS	49298428	49298544	.	-	0	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 340 456 +
Chr2	stalkie_big_nohaplotig	CDS	49311118	49311456	.	-	0	Parent=FBgn0028497.1.mrna1;Target=FBgn0028497.1 1 339 +
Chr2	stalkie_big_nohaplotig	mRNA	49311319	49311829	.	-	.	ID=comp144534_c0_seq1.mrna1;geneID=comp144534_c0_seq1.path1;Name=comp144534_c0_seq1;Dir=antisensecoverage=99.6;identity=99.6;matches=256;mismatches=1;indels=0;unknowns=0;Target=comp144534_c0_seq1 189 257 .;locus=RLOC_00017186
Chr2	stalkie_big_nohaplotig	exon	49311319	49311339	100	-	.	Parent=comp144534_c0_seq1.mrna1;Target=comp144534_c0_seq1 1 21 -
Chr2	stalkie_big_nohaplotig	exon	49311594	49311829	99	-	.	Parent=comp144534_c0_seq1.mrna1;Target=comp144534_c0_seq1 22 257 -
Chr2	stalkie_big_nohaplotig	CDS	49311761	49311829	.	-	0	Parent=comp144534_c0_seq1.mrna1
Chr2	gffcl	locus	49178826	49178896	.	-	.	ID=RLOC_00017187;geneIDs=comp149866_c0_seq1.path1;transcripts=comp149866_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49178826	49178896	.	-	.	ID=comp149866_c0_seq1.mrna1;geneID=comp149866_c0_seq1.path1;Name=comp149866_c0_seq1;Dir=indeterminatecoverage=19.2;identity=95.8;matches=68;mismatches=3;indels=0;unknowns=0;Target=comp149866_c0_seq1 370 300 .;CDS_Target=comp149866_c0_seq1 368 300 .;locus=RLOC_00017187
Chr2	stalkie_big_nohaplotig	exon	49178826	49178896	95	-	.	Parent=comp149866_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	49178828	49178896	.	-	0	Parent=comp149866_c0_seq1.mrna1
Chr2	gffcl	locus	49189533	49213000	.	+	.	ID=RLOC_00017188;geneIDs=FBgn0003733.1.path1;transcripts=FBgn0003733.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49189533	49213000	.	+	.	ID=FBgn0003733.1.mrna1;geneID=FBgn0003733.1.path1;Name=FBgn0003733.1;Dir=sensecoverage=100.0;identity=98.9;matches=3122;mismatches=34;indels=0;unknowns=0;locus=RLOC_00017188
Chr2	stalkie_big_nohaplotig	exon	49189533	49189775	96	+	.	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 1 243 +
Chr2	stalkie_big_nohaplotig	exon	49192214	49192522	99	+	.	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 244 552 +
Chr2	stalkie_big_nohaplotig	exon	49192662	49192899	100	+	.	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 553 790 +
Chr2	stalkie_big_nohaplotig	exon	49193401	49193480	100	+	.	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 791 870 +
Chr2	stalkie_big_nohaplotig	exon	49195613	49195784	100	+	.	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 871 1042 +
Chr2	stalkie_big_nohaplotig	exon	49196537	49196703	98	+	.	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 1043 1209 +
Chr2	stalkie_big_nohaplotig	exon	49201573	49201708	100	+	.	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 1210 1345 +
Chr2	stalkie_big_nohaplotig	exon	49201805	49201944	99	+	.	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 1346 1485 +
Chr2	stalkie_big_nohaplotig	exon	49202135	49202399	100	+	.	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 1486 1750 +
Chr2	stalkie_big_nohaplotig	exon	49202621	49202792	98	+	.	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 1751 1922 +
Chr2	stalkie_big_nohaplotig	exon	49205837	49206521	98	+	.	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 1923 2607 +
Chr2	stalkie_big_nohaplotig	exon	49208193	49208287	100	+	.	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 2608 2702 +
Chr2	stalkie_big_nohaplotig	exon	49208411	49208530	99	+	.	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 2703 2822 +
Chr2	stalkie_big_nohaplotig	exon	49210817	49210954	97	+	.	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 2823 2960 +
Chr2	stalkie_big_nohaplotig	exon	49212196	49212339	98	+	.	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 2961 3104 +
Chr2	stalkie_big_nohaplotig	exon	49212949	49213000	100	+	.	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 3105 3156 +
Chr2	stalkie_big_nohaplotig	CDS	49189533	49189775	.	+	0	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 1 243 +
Chr2	stalkie_big_nohaplotig	CDS	49192214	49192522	.	+	0	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 244 552 +
Chr2	stalkie_big_nohaplotig	CDS	49192662	49192899	.	+	0	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 553 790 +
Chr2	stalkie_big_nohaplotig	CDS	49193401	49193480	.	+	2	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 791 870 +
Chr2	stalkie_big_nohaplotig	CDS	49195613	49195784	.	+	0	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 871 1042 +
Chr2	stalkie_big_nohaplotig	CDS	49196537	49196703	.	+	2	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 1043 1209 +
Chr2	stalkie_big_nohaplotig	CDS	49201573	49201708	.	+	0	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 1210 1345 +
Chr2	stalkie_big_nohaplotig	CDS	49201805	49201944	.	+	2	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 1346 1485 +
Chr2	stalkie_big_nohaplotig	CDS	49202135	49202399	.	+	0	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 1486 1750 +
Chr2	stalkie_big_nohaplotig	CDS	49202621	49202792	.	+	2	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 1751 1922 +
Chr2	stalkie_big_nohaplotig	CDS	49205837	49206521	.	+	1	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 1923 2607 +
Chr2	stalkie_big_nohaplotig	CDS	49208193	49208287	.	+	0	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 2608 2702 +
Chr2	stalkie_big_nohaplotig	CDS	49208411	49208530	.	+	1	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 2703 2822 +
Chr2	stalkie_big_nohaplotig	CDS	49210817	49210954	.	+	1	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 2823 2960 +
Chr2	stalkie_big_nohaplotig	CDS	49212196	49212339	.	+	1	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 2961 3104 +
Chr2	stalkie_big_nohaplotig	CDS	49212949	49213000	.	+	1	Parent=FBgn0003733.1.mrna1;Target=FBgn0003733.1 3105 3156 +
Chr2	gffcl	locus	49215940	49221993	.	-	.	ID=RLOC_00017189;geneIDs=FBgn0050493.1.path1;transcripts=FBgn0050493.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49215940	49221993	.	-	.	ID=FBgn0050493.1.mrna1;geneID=FBgn0050493.1.path1;Name=FBgn0050493.1;Dir=sensecoverage=100.0;identity=99.0;matches=1007;mismatches=10;indels=0;unknowns=0;locus=RLOC_00017189
Chr2	stalkie_big_nohaplotig	exon	49215940	49215975	100	-	.	Parent=FBgn0050493.1.mrna1;Target=FBgn0050493.1 982 1017 +
Chr2	stalkie_big_nohaplotig	exon	49216039	49216248	99	-	.	Parent=FBgn0050493.1.mrna1;Target=FBgn0050493.1 772 981 +
Chr2	stalkie_big_nohaplotig	exon	49216310	49217004	98	-	.	Parent=FBgn0050493.1.mrna1;Target=FBgn0050493.1 77 771 +
Chr2	stalkie_big_nohaplotig	exon	49221918	49221993	100	-	.	Parent=FBgn0050493.1.mrna1;Target=FBgn0050493.1 1 76 +
Chr2	stalkie_big_nohaplotig	CDS	49215940	49215975	.	-	0	Parent=FBgn0050493.1.mrna1;Target=FBgn0050493.1 982 1017 +
Chr2	stalkie_big_nohaplotig	CDS	49216039	49216248	.	-	0	Parent=FBgn0050493.1.mrna1;Target=FBgn0050493.1 772 981 +
Chr2	stalkie_big_nohaplotig	CDS	49216310	49217004	.	-	2	Parent=FBgn0050493.1.mrna1;Target=FBgn0050493.1 77 771 +
Chr2	stalkie_big_nohaplotig	CDS	49221918	49221993	.	-	0	Parent=FBgn0050493.1.mrna1;Target=FBgn0050493.1 1 76 +
Chr2	gffcl	locus	49262198	51107143	.	+	.	ID=RLOC_00017191;geneIDs=comp135883_c0_seq1.path1;transcripts=comp135883_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49262198	51107143	.	+	.	ID=comp135883_c0_seq1.mrna1;geneID=comp135883_c0_seq1.path1;Name=comp135883_c0_seq1;Dir=sensecoverage=93.2;identity=99.0;matches=573;mismatches=5;indels=1;unknowns=0;locus=RLOC_00017191
Chr2	stalkie_big_nohaplotig	exon	49262198	49262422	98	+	.	Parent=comp135883_c0_seq1.mrna1;Target=comp135883_c0_seq1 6 231 +
Chr2	stalkie_big_nohaplotig	exon	49262489	49262819	99	+	.	Parent=comp135883_c0_seq1.mrna1;Target=comp135883_c0_seq1 232 562 +
Chr2	stalkie_big_nohaplotig	exon	51094346	51094347	100	+	.	Parent=comp135883_c0_seq1.mrna1;Target=comp135883_c0_seq1 563 564 +
Chr2	stalkie_big_nohaplotig	exon	51096768	51096769	100	+	.	Parent=comp135883_c0_seq1.mrna1;Target=comp135883_c0_seq1 565 566 +
Chr2	stalkie_big_nohaplotig	exon	51100944	51100957	100	+	.	Parent=comp135883_c0_seq1.mrna1;Target=comp135883_c0_seq1 567 580 +
Chr2	stalkie_big_nohaplotig	exon	51107140	51107143	100	+	.	Parent=comp135883_c0_seq1.mrna1;Target=comp135883_c0_seq1 581 584 +
Chr2	stalkie_big_nohaplotig	CDS	49262413	49262422	.	+	0	Parent=comp135883_c0_seq1.mrna1;Target=comp135883_c0_seq1 222 231 +
Chr2	stalkie_big_nohaplotig	CDS	49262489	49262772	.	+	2	Parent=comp135883_c0_seq1.mrna1;Target=comp135883_c0_seq1 232 515 +
Chr2	gffcl	locus	49266670	49267127	.	+	.	ID=RLOC_00017192;geneIDs=comp58411_c0_seq1.path2;transcripts=comp58411_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	49266670	49267127	.	+	.	ID=comp58411_c0_seq1.mrna2;geneID=comp58411_c0_seq1.path2;Name=comp58411_c0_seq1;Dir=antisensecoverage=89.4;identity=97.4;matches=376;mismatches=10;indels=0;unknowns=0;locus=RLOC_00017192
Chr2	stalkie_big_nohaplotig	exon	49266670	49266722	100	+	.	Parent=comp58411_c0_seq1.mrna2;Target=comp58411_c0_seq1 351 403 -
Chr2	stalkie_big_nohaplotig	exon	49266795	49267127	96	+	.	Parent=comp58411_c0_seq1.mrna2;Target=comp58411_c0_seq1 18 350 -
Chr2	stalkie_big_nohaplotig	CDS	49266671	49266722	.	+	0	Parent=comp58411_c0_seq1.mrna2;Target=comp58411_c0_seq1 351 402 .
Chr2	stalkie_big_nohaplotig	CDS	49266795	49267048	.	+	2	Parent=comp58411_c0_seq1.mrna2;Target=comp58411_c0_seq1 97 350 .
Chr2	gffcl	locus	49293002	49293062	.	-	.	ID=RLOC_00017193;geneIDs=comp149866_c0_seq1.path2;transcripts=comp149866_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	49293002	49293062	.	-	.	ID=comp149866_c0_seq1.mrna2;geneID=comp149866_c0_seq1.path2;Name=comp149866_c0_seq1;Dir=indeterminatecoverage=16.5;identity=96.7;matches=59;mismatches=2;indels=0;unknowns=0;Target=comp149866_c0_seq1 370 310 .;CDS_Target=comp149866_c0_seq1 368 312 .;locus=RLOC_00017193
Chr2	stalkie_big_nohaplotig	exon	49293002	49293062	96	-	.	Parent=comp149866_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	49293004	49293060	.	-	0	Parent=comp149866_c0_seq1.mrna2
Chr2	gffcl	locus	49318471	49330462	.	-	.	ID=RLOC_00017194;geneIDs=FBgn0034859.1.path1;transcripts=FBgn0034859.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49318471	49330462	.	-	.	ID=FBgn0034859.1.mrna1;geneID=FBgn0034859.1.path1;Name=FBgn0034859.1;Dir=sensecoverage=100.0;identity=98.8;matches=3587;mismatches=43;indels=0;unknowns=0;locus=RLOC_00017194
Chr2	stalkie_big_nohaplotig	exon	49318471	49318617	97	-	.	Parent=FBgn0034859.1.mrna1;Target=FBgn0034859.1 3484 3630 +
Chr2	stalkie_big_nohaplotig	exon	49318683	49319210	98	-	.	Parent=FBgn0034859.1.mrna1;Target=FBgn0034859.1 2956 3483 +
Chr2	stalkie_big_nohaplotig	exon	49320347	49320474	97	-	.	Parent=FBgn0034859.1.mrna1;Target=FBgn0034859.1 2828 2955 +
Chr2	stalkie_big_nohaplotig	exon	49320535	49321610	98	-	.	Parent=FBgn0034859.1.mrna1;Target=FBgn0034859.1 1752 2827 +
Chr2	stalkie_big_nohaplotig	exon	49321683	49321888	97	-	.	Parent=FBgn0034859.1.mrna1;Target=FBgn0034859.1 1546 1751 +
Chr2	stalkie_big_nohaplotig	exon	49322445	49323471	99	-	.	Parent=FBgn0034859.1.mrna1;Target=FBgn0034859.1 519 1545 +
Chr2	stalkie_big_nohaplotig	exon	49323531	49323749	96	-	.	Parent=FBgn0034859.1.mrna1;Target=FBgn0034859.1 300 518 +
Chr2	stalkie_big_nohaplotig	exon	49330164	49330462	100	-	.	Parent=FBgn0034859.1.mrna1;Target=FBgn0034859.1 1 299 +
Chr2	stalkie_big_nohaplotig	CDS	49318471	49318617	.	-	0	Parent=FBgn0034859.1.mrna1;Target=FBgn0034859.1 3484 3630 +
Chr2	stalkie_big_nohaplotig	CDS	49318683	49319210	.	-	0	Parent=FBgn0034859.1.mrna1;Target=FBgn0034859.1 2956 3483 +
Chr2	stalkie_big_nohaplotig	CDS	49320347	49320474	.	-	2	Parent=FBgn0034859.1.mrna1;Target=FBgn0034859.1 2828 2955 +
Chr2	stalkie_big_nohaplotig	CDS	49320535	49321610	.	-	1	Parent=FBgn0034859.1.mrna1;Target=FBgn0034859.1 1752 2827 +
Chr2	stalkie_big_nohaplotig	CDS	49321683	49321888	.	-	0	Parent=FBgn0034859.1.mrna1;Target=FBgn0034859.1 1546 1751 +
Chr2	stalkie_big_nohaplotig	CDS	49322445	49323471	.	-	1	Parent=FBgn0034859.1.mrna1;Target=FBgn0034859.1 519 1545 +
Chr2	stalkie_big_nohaplotig	CDS	49323531	49323749	.	-	1	Parent=FBgn0034859.1.mrna1;Target=FBgn0034859.1 300 518 +
Chr2	stalkie_big_nohaplotig	CDS	49330164	49330462	.	-	0	Parent=FBgn0034859.1.mrna1;Target=FBgn0034859.1 1 299 +
Chr2	gffcl	locus	49332382	49333069	.	+	.	ID=RLOC_00017195;geneIDs=FBgn0010287.3.path1;transcripts=FBgn0010287.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49332382	49333069	.	+	.	ID=FBgn0010287.3.mrna1;geneID=FBgn0010287.3.path1;Name=FBgn0010287.3;Dir=sensecoverage=100.0;identity=97.6;matches=609;mismatches=15;indels=0;unknowns=0;locus=RLOC_00017195
Chr2	stalkie_big_nohaplotig	exon	49332382	49332494	99	+	.	Parent=FBgn0010287.3.mrna1;Target=FBgn0010287.3 1 113 +
Chr2	stalkie_big_nohaplotig	exon	49332559	49333069	97	+	.	Parent=FBgn0010287.3.mrna1;Target=FBgn0010287.3 114 624 +
Chr2	stalkie_big_nohaplotig	CDS	49332382	49332494	.	+	0	Parent=FBgn0010287.3.mrna1;Target=FBgn0010287.3 1 113 +
Chr2	stalkie_big_nohaplotig	CDS	49332559	49333069	.	+	1	Parent=FBgn0010287.3.mrna1;Target=FBgn0010287.3 114 624 +
Chr2	gffcl	locus	49366764	49367641	.	+	.	ID=RLOC_00017196;geneIDs=ORF2282.path1;transcripts=ORF2282.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49366764	49367641	.	+	.	ID=ORF2282.mrna1;geneID=ORF2282.path1;Name=ORF2282;Dir=indeterminatecoverage=100.0;identity=98.4;matches=868;mismatches=10;indels=4;unknowns=0;Target=ORF2282 882 1 .;CDS_Target=ORF2282 882 76 .;locus=RLOC_00017196
Chr2	stalkie_big_nohaplotig	exon	49366764	49367641	98	+	.	Parent=ORF2282.mrna1
Chr2	stalkie_big_nohaplotig	CDS	49366835	49367641	.	+	0	Parent=ORF2282.mrna1
Chr2	gffcl	locus	49388347	49389396	.	-	.	ID=RLOC_00017197;geneIDs=ORF2340.path1;transcripts=ORF2340.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49388347	49389396	.	-	.	ID=ORF2340.mrna1;geneID=ORF2340.path1;Name=ORF2340;Dir=sensecoverage=100.0;identity=96.2;matches=840;mismatches=33;indels=0;unknowns=0;locus=RLOC_00017197
Chr2	stalkie_big_nohaplotig	exon	49388347	49388548	96	-	.	Parent=ORF2340.mrna1;Target=ORF2340 672 873 +
Chr2	stalkie_big_nohaplotig	exon	49388616	49388765	95	-	.	Parent=ORF2340.mrna1;Target=ORF2340 522 671 +
Chr2	stalkie_big_nohaplotig	exon	49388824	49389204	96	-	.	Parent=ORF2340.mrna1;Target=ORF2340 141 521 +
Chr2	stalkie_big_nohaplotig	exon	49389257	49389396	97	-	.	Parent=ORF2340.mrna1;Target=ORF2340 1 140 +
Chr2	stalkie_big_nohaplotig	CDS	49388347	49388548	.	-	1	Parent=ORF2340.mrna1;Target=ORF2340 672 873 +
Chr2	stalkie_big_nohaplotig	CDS	49388616	49388765	.	-	1	Parent=ORF2340.mrna1;Target=ORF2340 522 671 +
Chr2	stalkie_big_nohaplotig	CDS	49388824	49389204	.	-	1	Parent=ORF2340.mrna1;Target=ORF2340 141 521 +
Chr2	stalkie_big_nohaplotig	CDS	49389257	49389294	.	-	0	Parent=ORF2340.mrna1;Target=ORF2340 103 140 +
Chr2	gffcl	locus	49394567	49395572	.	-	.	ID=RLOC_00017198;geneIDs=comp154998_c1_seq1.path1;transcripts=comp154998_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49394567	49395572	.	-	.	ID=comp154998_c1_seq1.mrna1;geneID=comp154998_c1_seq1.path1;Name=comp154998_c1_seq1;Dir=sensecoverage=100.0;identity=96.4;matches=857;mismatches=25;indels=7;unknowns=0;locus=RLOC_00017198
Chr2	stalkie_big_nohaplotig	exon	49394567	49394887	98	-	.	Parent=comp154998_c1_seq1.mrna1;Target=comp154998_c1_seq1 565 886 +
Chr2	stalkie_big_nohaplotig	exon	49394957	49395076	91	-	.	Parent=comp154998_c1_seq1.mrna1;Target=comp154998_c1_seq1 445 564 +
Chr2	stalkie_big_nohaplotig	exon	49395129	49395572	95	-	.	Parent=comp154998_c1_seq1.mrna1;Target=comp154998_c1_seq1 1 444 +
Chr2	stalkie_big_nohaplotig	CDS	49394683	49394887	.	-	1	Parent=comp154998_c1_seq1.mrna1;Target=comp154998_c1_seq1 565 769 +
Chr2	stalkie_big_nohaplotig	CDS	49394957	49395076	.	-	1	Parent=comp154998_c1_seq1.mrna1;Target=comp154998_c1_seq1 445 564 +
Chr2	stalkie_big_nohaplotig	CDS	49395129	49395166	.	-	0	Parent=comp154998_c1_seq1.mrna1;Target=comp154998_c1_seq1 407 444 +
Chr2	gffcl	locus	49418313	49418888	.	-	.	ID=RLOC_00017199;geneIDs=comp158500_c0_seq1.path5;transcripts=comp158500_c0_seq1.mrna5
Chr2	stalkie_big_nohaplotig	mRNA	49418313	49418888	.	-	.	ID=comp158500_c0_seq1.mrna5;geneID=comp158500_c0_seq1.path5;Name=comp158500_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=560;mismatches=13;indels=3;unknowns=0;Target=comp158500_c0_seq1 573 1 .;CDS_Target=comp158500_c0_seq1 571 410 .;locus=RLOC_00017199
Chr2	stalkie_big_nohaplotig	exon	49418313	49418888	97	-	.	Parent=comp158500_c0_seq1.mrna5
Chr2	stalkie_big_nohaplotig	CDS	49418315	49418476	.	-	0	Parent=comp158500_c0_seq1.mrna5
Chr2	gffcl	locus	49419009	49419998	.	+	.	ID=RLOC_00017200;geneIDs=ORF2078.path1;transcripts=ORF2078.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49419009	49419998	.	+	.	ID=ORF2078.mrna1;geneID=ORF2078.path1;Name=ORF2078;Dir=indeterminatecoverage=100.0;identity=98.6;matches=911;mismatches=13;indels=0;unknowns=0;locus=RLOC_00017200
Chr2	stalkie_big_nohaplotig	exon	49419009	49419853	98	+	.	Parent=ORF2078.mrna1;Target=ORF2078 845 1 .
Chr2	stalkie_big_nohaplotig	exon	49419920	49419998	97	+	.	Parent=ORF2078.mrna1;Target=ORF2078 924 846 .
Chr2	stalkie_big_nohaplotig	CDS	49419009	49419853	.	+	0	Parent=ORF2078.mrna1;Target=ORF2078 845 1 .
Chr2	stalkie_big_nohaplotig	CDS	49419920	49419998	.	+	1	Parent=ORF2078.mrna1;Target=ORF2078 924 846 .
Chr2	gffcl	locus	49435840	49442629	.	-	.	ID=RLOC_00017201;geneIDs=FBgn0015372.1.path1;transcripts=FBgn0015372.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49435840	49442629	.	-	.	ID=FBgn0015372.1.mrna1;geneID=FBgn0015372.1.path1;Name=FBgn0015372.1;Dir=sensecoverage=100.0;identity=99.2;matches=783;mismatches=6;indels=0;unknowns=0;locus=RLOC_00017201
Chr2	stalkie_big_nohaplotig	exon	49435840	49436442	99	-	.	Parent=FBgn0015372.1.mrna1;Target=FBgn0015372.1 187 789 +
Chr2	stalkie_big_nohaplotig	exon	49439506	49439633	99	-	.	Parent=FBgn0015372.1.mrna1;Target=FBgn0015372.1 59 186 +
Chr2	stalkie_big_nohaplotig	exon	49442572	49442629	100	-	.	Parent=FBgn0015372.1.mrna1;Target=FBgn0015372.1 1 58 +
Chr2	stalkie_big_nohaplotig	CDS	49435840	49436442	.	-	0	Parent=FBgn0015372.1.mrna1;Target=FBgn0015372.1 187 789 +
Chr2	stalkie_big_nohaplotig	CDS	49439506	49439633	.	-	2	Parent=FBgn0015372.1.mrna1;Target=FBgn0015372.1 59 186 +
Chr2	stalkie_big_nohaplotig	CDS	49442572	49442629	.	-	0	Parent=FBgn0015372.1.mrna1;Target=FBgn0015372.1 1 58 +
Chr2	gffcl	locus	49490716	49625501	.	+	.	ID=RLOC_00017202;geneIDs=FBgn0001269.1.path1;transcripts=FBgn0001269.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49490716	49625501	.	+	.	ID=FBgn0001269.1.mrna1;geneID=FBgn0001269.1.path1;Name=FBgn0001269.1;Dir=sensecoverage=100.0;identity=99.3;matches=1906;mismatches=13;indels=1;unknowns=0;locus=RLOC_00017202
Chr2	stalkie_big_nohaplotig	exon	49490716	49492336	99	+	.	Parent=FBgn0001269.1.mrna1;Target=FBgn0001269.1 1 1621 +
Chr2	stalkie_big_nohaplotig	exon	49616668	49616673	100	+	.	Parent=FBgn0001269.1.mrna1;Target=FBgn0001269.1 1622 1627 +
Chr2	stalkie_big_nohaplotig	exon	49622589	49622704	100	+	.	Parent=FBgn0001269.1.mrna1;Target=FBgn0001269.1 1628 1743 +
Chr2	stalkie_big_nohaplotig	exon	49625326	49625501	99	+	.	Parent=FBgn0001269.1.mrna1;Target=FBgn0001269.1 1744 1920 +
Chr2	stalkie_big_nohaplotig	CDS	49490716	49492336	.	+	0	Parent=FBgn0001269.1.mrna1;Target=FBgn0001269.1 1 1621 +
Chr2	stalkie_big_nohaplotig	CDS	49616668	49616673	.	+	2	Parent=FBgn0001269.1.mrna1;Target=FBgn0001269.1 1622 1627 +
Chr2	stalkie_big_nohaplotig	CDS	49622589	49622704	.	+	2	Parent=FBgn0001269.1.mrna1;Target=FBgn0001269.1 1628 1743 +
Chr2	stalkie_big_nohaplotig	CDS	49625326	49625501	.	+	0	Parent=FBgn0001269.1.mrna1;Target=FBgn0001269.1 1744 1920 +
Chr2	gffcl	locus	49543695	49544160	.	+	.	ID=RLOC_00017203;geneIDs=comp119109_c0_seq1.path1;transcripts=comp119109_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49543695	49544160	.	+	.	ID=comp119109_c0_seq1.mrna1;geneID=comp119109_c0_seq1.path1;Name=comp119109_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=465;mismatches=0;indels=1;unknowns=0;Target=comp119109_c0_seq1 466 2 .;CDS_Target=comp119109_c0_seq1 243 4 .;locus=RLOC_00017203
Chr2	stalkie_big_nohaplotig	exon	49543695	49544160	99	+	.	Parent=comp119109_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	49543697	49543936	.	+	0	Parent=comp119109_c0_seq1.mrna1
Chr2	gffcl	locus	49649148	49649568	.	+	.	ID=RLOC_00017204;geneIDs=comp1077333_c0_seq1.path1;transcripts=comp1077333_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49649148	49649568	.	+	.	ID=comp1077333_c0_seq1.mrna1;geneID=comp1077333_c0_seq1.path1;Name=comp1077333_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=408;mismatches=13;indels=0;unknowns=0;Target=comp1077333_c0_seq1 421 1 .;CDS_Target=comp1077333_c0_seq1 54 1 .;locus=RLOC_00017204
Chr2	stalkie_big_nohaplotig	exon	49649148	49649568	96	+	.	Parent=comp1077333_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	49649148	49649201	.	+	0	Parent=comp1077333_c0_seq1.mrna1
Chr2	gffcl	locus	49650206	49654268	.	-	.	ID=RLOC_00017205;geneIDs=FBgn0064237.1.path1;transcripts=FBgn0064237.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49650206	49654268	.	-	.	ID=FBgn0064237.1.mrna1;geneID=FBgn0064237.1.path1;Name=FBgn0064237.1;Dir=sensecoverage=100.0;identity=98.9;matches=1299;mismatches=15;indels=0;unknowns=0;locus=RLOC_00017205
Chr2	stalkie_big_nohaplotig	exon	49650206	49650843	99	-	.	Parent=FBgn0064237.1.mrna1;Target=FBgn0064237.1 677 1314 +
Chr2	stalkie_big_nohaplotig	exon	49650931	49651491	98	-	.	Parent=FBgn0064237.1.mrna1;Target=FBgn0064237.1 116 676 +
Chr2	stalkie_big_nohaplotig	exon	49654154	49654268	100	-	.	Parent=FBgn0064237.1.mrna1;Target=FBgn0064237.1 1 115 +
Chr2	stalkie_big_nohaplotig	CDS	49650206	49650843	.	-	2	Parent=FBgn0064237.1.mrna1;Target=FBgn0064237.1 677 1314 +
Chr2	stalkie_big_nohaplotig	CDS	49650931	49651491	.	-	2	Parent=FBgn0064237.1.mrna1;Target=FBgn0064237.1 116 676 +
Chr2	stalkie_big_nohaplotig	CDS	49654154	49654268	.	-	0	Parent=FBgn0064237.1.mrna1;Target=FBgn0064237.1 1 115 +
Chr2	gffcl	locus	49675252	49685311	.	+	.	ID=RLOC_00017206;geneIDs=FBgn0000577.1.path1;transcripts=FBgn0000577.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49675252	49685311	.	+	.	ID=FBgn0000577.1.mrna1;geneID=FBgn0000577.1.path1;Name=FBgn0000577.1;Dir=sensecoverage=99.8;identity=99.3;matches=1679;mismatches=6;indels=6;unknowns=0;locus=RLOC_00017206
Chr2	stalkie_big_nohaplotig	exon	49675252	49676595	99	+	.	Parent=FBgn0000577.1.mrna1;Target=FBgn0000577.1 5 1348 +
Chr2	stalkie_big_nohaplotig	exon	49682893	49682990	100	+	.	Parent=FBgn0000577.1.mrna1;Target=FBgn0000577.1 1349 1446 +
Chr2	stalkie_big_nohaplotig	exon	49685066	49685311	97	+	.	Parent=FBgn0000577.1.mrna1;Target=FBgn0000577.1 1447 1692 +
Chr2	stalkie_big_nohaplotig	CDS	49675254	49676595	.	+	0	Parent=FBgn0000577.1.mrna1;Target=FBgn0000577.1 7 1348 +
Chr2	stalkie_big_nohaplotig	CDS	49682893	49682990	.	+	2	Parent=FBgn0000577.1.mrna1;Target=FBgn0000577.1 1349 1446 +
Chr2	stalkie_big_nohaplotig	CDS	49685066	49685311	.	+	0	Parent=FBgn0000577.1.mrna1;Target=FBgn0000577.1 1447 1692 +
Chr2	gffcl	locus	49758282	49759432	.	+	.	ID=RLOC_00017207;geneIDs=comp151935_c0_seq1.path1;transcripts=comp151935_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49758282	49759432	.	+	.	ID=comp151935_c0_seq1.mrna1;geneID=comp151935_c0_seq1.path1;Name=comp151935_c0_seq1;Dir=indeterminatecoverage=96.7;identity=98.7;matches=1136;mismatches=14;indels=1;unknowns=0;Target=comp151935_c0_seq1 1189 40 .;CDS_Target=comp151935_c0_seq1 148 41 .;locus=RLOC_00017207
Chr2	stalkie_big_nohaplotig	exon	49758282	49759432	98	+	.	Parent=comp151935_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	49758283	49758390	.	+	0	Parent=comp151935_c0_seq1.mrna1
Chr2	gffcl	locus	49773322	49773849	.	-	.	ID=RLOC_00017208;geneIDs=FBgn0000308.1.path1;transcripts=FBgn0000308.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49773322	49773849	.	-	.	ID=FBgn0000308.1.mrna1;geneID=FBgn0000308.1.path1;Name=FBgn0000308.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=526;mismatches=2;indels=0;unknowns=0;Target=FBgn0000308.1 528 1 .;locus=RLOC_00017208
Chr2	stalkie_big_nohaplotig	exon	49773322	49773849	99	-	.	Parent=FBgn0000308.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	49773322	49773849	.	-	0	Parent=FBgn0000308.1.mrna1
Chr2	gffcl	locus	49775898	49776425	.	-	.	ID=RLOC_00017209;geneIDs=FBgn0000308.1.path2;transcripts=FBgn0000308.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	49775898	49776425	.	-	.	ID=FBgn0000308.1.mrna2;geneID=FBgn0000308.1.path2;Name=FBgn0000308.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=526;mismatches=2;indels=0;unknowns=0;Target=FBgn0000308.1 528 1 .;locus=RLOC_00017209
Chr2	stalkie_big_nohaplotig	exon	49775898	49776425	99	-	.	Parent=FBgn0000308.1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	49775898	49776425	.	-	0	Parent=FBgn0000308.1.mrna2
Chr2	gffcl	locus	49831976	49934408	.	-	.	ID=RLOC_00017210;geneIDs=FBgn0033636.1.path1,FBgn0085430.1.path1,comp161243_c0_seq1.path1,comp163283_c4_seq1.path1;transcripts=FBgn0033636.1.mrna1,comp161243_c0_seq1.mrna1,comp163283_c4_seq1.mrna1,FBgn0085430.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49831976	49932348	.	-	.	ID=FBgn0033636.1.mrna1;geneID=FBgn0033636.1.path1;Name=FBgn0033636.1;Dir=sensecoverage=46.4;identity=99.0;matches=3412;mismatches=27;indels=6;unknowns=0;locus=RLOC_00017210
Chr2	stalkie_big_nohaplotig	exon	49831976	49831983	100	-	.	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 6581 6588 +
Chr2	stalkie_big_nohaplotig	exon	49866626	49866635	100	-	.	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 6545 6554 +
Chr2	stalkie_big_nohaplotig	exon	49867392	49867394	100	-	.	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 6542 6544 +
Chr2	stalkie_big_nohaplotig	exon	49881187	49881196	100	-	.	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 6529 6538 +
Chr2	stalkie_big_nohaplotig	exon	49882339	49882350	75	-	.	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 6413 6424 +
Chr2	stalkie_big_nohaplotig	exon	49882518	49882523	83	-	.	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 6407 6412 +
Chr2	stalkie_big_nohaplotig	exon	49888819	49888829	100	-	.	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 6396 6406 +
Chr2	stalkie_big_nohaplotig	exon	49888838	49888845	100	-	.	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 6360 6367 +
Chr2	stalkie_big_nohaplotig	exon	49907102	49907112	100	-	.	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 6342 6352 +
Chr2	stalkie_big_nohaplotig	exon	49924000	49924008	100	-	.	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 6318 6326 +
Chr2	stalkie_big_nohaplotig	exon	49926926	49928645	99	-	.	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 4550 6263 +
Chr2	stalkie_big_nohaplotig	exon	49928703	49928851	100	-	.	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 4401 4549 +
Chr2	stalkie_big_nohaplotig	exon	49929092	49929261	99	-	.	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 4231 4400 +
Chr2	stalkie_big_nohaplotig	exon	49929896	49929949	100	-	.	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 4177 4230 +
Chr2	stalkie_big_nohaplotig	exon	49930855	49930920	100	-	.	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 4111 4176 +
Chr2	stalkie_big_nohaplotig	exon	49930979	49931335	98	-	.	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 3754 4110 +
Chr2	stalkie_big_nohaplotig	exon	49931447	49931719	98	-	.	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 3481 3753 +
Chr2	stalkie_big_nohaplotig	exon	49931787	49932348	98	-	.	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 2919 3480 +
Chr2	stalkie_big_nohaplotig	CDS	49831976	49831983	.	-	2	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 6581 6588 +
Chr2	stalkie_big_nohaplotig	CDS	49866626	49866635	.	-	0	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 6545 6554 +
Chr2	stalkie_big_nohaplotig	CDS	49867392	49867394	.	-	0	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 6542 6544 +
Chr2	stalkie_big_nohaplotig	CDS	49881187	49881196	.	-	1	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 6529 6538 +
Chr2	stalkie_big_nohaplotig	CDS	49882339	49882350	.	-	1	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 6413 6424 +
Chr2	stalkie_big_nohaplotig	CDS	49882518	49882523	.	-	1	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 6407 6412 +
Chr2	stalkie_big_nohaplotig	CDS	49888819	49888829	.	-	0	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 6396 6406 +
Chr2	stalkie_big_nohaplotig	CDS	49888838	49888845	.	-	2	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 6360 6367 +
Chr2	stalkie_big_nohaplotig	CDS	49907102	49907112	.	-	1	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 6342 6352 +
Chr2	stalkie_big_nohaplotig	CDS	49924000	49924008	.	-	1	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 6318 6326 +
Chr2	stalkie_big_nohaplotig	CDS	49926926	49928645	.	-	2	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 4550 6263 +
Chr2	stalkie_big_nohaplotig	CDS	49928703	49928851	.	-	1	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 4401 4549 +
Chr2	stalkie_big_nohaplotig	CDS	49929092	49929261	.	-	0	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 4231 4400 +
Chr2	stalkie_big_nohaplotig	CDS	49929896	49929949	.	-	0	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 4177 4230 +
Chr2	stalkie_big_nohaplotig	CDS	49930855	49930920	.	-	0	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 4111 4176 +
Chr2	stalkie_big_nohaplotig	CDS	49930979	49931335	.	-	0	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 3754 4110 +
Chr2	stalkie_big_nohaplotig	CDS	49931447	49931719	.	-	0	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 3481 3753 +
Chr2	stalkie_big_nohaplotig	CDS	49931787	49932347	.	-	0	Parent=FBgn0033636.1.mrna1;Target=FBgn0033636.1 2920 3480 +
Chr2	stalkie_big_nohaplotig	mRNA	49916103	49926949	.	-	.	ID=comp161243_c0_seq1.mrna1;geneID=comp161243_c0_seq1.path1;Name=comp161243_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=3600;mismatches=15;indels=0;unknowns=0;locus=RLOC_00017210
Chr2	stalkie_big_nohaplotig	exon	49916103	49916348	98	-	.	Parent=comp161243_c0_seq1.mrna1;Target=comp161243_c0_seq1 1 246 -
Chr2	stalkie_big_nohaplotig	exon	49917346	49917753	99	-	.	Parent=comp161243_c0_seq1.mrna1;Target=comp161243_c0_seq1 247 654 -
Chr2	stalkie_big_nohaplotig	exon	49921329	49922299	99	-	.	Parent=comp161243_c0_seq1.mrna1;Target=comp161243_c0_seq1 655 1625 -
Chr2	stalkie_big_nohaplotig	exon	49924960	49926949	99	-	.	Parent=comp161243_c0_seq1.mrna1;Target=comp161243_c0_seq1 1626 3615 -
Chr2	stalkie_big_nohaplotig	CDS	49916105	49916348	.	-	1	Parent=comp161243_c0_seq1.mrna1;Target=comp161243_c0_seq1 3 246 .
Chr2	stalkie_big_nohaplotig	CDS	49917346	49917753	.	-	1	Parent=comp161243_c0_seq1.mrna1;Target=comp161243_c0_seq1 247 654 .
Chr2	stalkie_big_nohaplotig	CDS	49921329	49922299	.	-	0	Parent=comp161243_c0_seq1.mrna1;Target=comp161243_c0_seq1 655 1625 .
Chr2	stalkie_big_nohaplotig	CDS	49924960	49926948	.	-	0	Parent=comp161243_c0_seq1.mrna1;Target=comp161243_c0_seq1 1626 3614 .
Chr2	stalkie_big_nohaplotig	mRNA	49926923	49932491	.	-	.	ID=comp163283_c4_seq1.mrna1;geneID=comp163283_c4_seq1.path1;Name=comp163283_c4_seq1;Dir=sensecoverage=31.2;identity=99.1;matches=3498;mismatches=26;indels=6;unknowns=0;locus=RLOC_00017210
Chr2	stalkie_big_nohaplotig	exon	49926923	49928645	99	-	.	Parent=comp163283_c4_seq1.mrna1;Target=comp163283_c4_seq1 7560 9276 +
Chr2	stalkie_big_nohaplotig	exon	49928703	49928851	100	-	.	Parent=comp163283_c4_seq1.mrna1;Target=comp163283_c4_seq1 7411 7559 +
Chr2	stalkie_big_nohaplotig	exon	49929092	49929261	99	-	.	Parent=comp163283_c4_seq1.mrna1;Target=comp163283_c4_seq1 7241 7410 +
Chr2	stalkie_big_nohaplotig	exon	49929896	49929937	100	-	.	Parent=comp163283_c4_seq1.mrna1;Target=comp163283_c4_seq1 7199 7240 +
Chr2	stalkie_big_nohaplotig	exon	49930660	49930704	100	-	.	Parent=comp163283_c4_seq1.mrna1;Target=comp163283_c4_seq1 7154 7198 +
Chr2	stalkie_big_nohaplotig	exon	49930855	49930920	100	-	.	Parent=comp163283_c4_seq1.mrna1;Target=comp163283_c4_seq1 7088 7153 +
Chr2	stalkie_big_nohaplotig	exon	49930979	49931335	98	-	.	Parent=comp163283_c4_seq1.mrna1;Target=comp163283_c4_seq1 6731 7087 +
Chr2	stalkie_big_nohaplotig	exon	49931447	49931719	98	-	.	Parent=comp163283_c4_seq1.mrna1;Target=comp163283_c4_seq1 6458 6730 +
Chr2	stalkie_big_nohaplotig	exon	49931787	49932491	98	-	.	Parent=comp163283_c4_seq1.mrna1;Target=comp163283_c4_seq1 5753 6457 +
Chr2	stalkie_big_nohaplotig	CDS	49926925	49928645	.	-	2	Parent=comp163283_c4_seq1.mrna1;Target=comp163283_c4_seq1 7560 9274 +
Chr2	stalkie_big_nohaplotig	CDS	49928703	49928851	.	-	1	Parent=comp163283_c4_seq1.mrna1;Target=comp163283_c4_seq1 7411 7559 +
Chr2	stalkie_big_nohaplotig	CDS	49929092	49929261	.	-	0	Parent=comp163283_c4_seq1.mrna1;Target=comp163283_c4_seq1 7241 7410 +
Chr2	stalkie_big_nohaplotig	CDS	49929896	49929937	.	-	0	Parent=comp163283_c4_seq1.mrna1;Target=comp163283_c4_seq1 7199 7240 +
Chr2	stalkie_big_nohaplotig	CDS	49930660	49930704	.	-	0	Parent=comp163283_c4_seq1.mrna1;Target=comp163283_c4_seq1 7154 7198 +
Chr2	stalkie_big_nohaplotig	CDS	49930855	49930920	.	-	0	Parent=comp163283_c4_seq1.mrna1;Target=comp163283_c4_seq1 7088 7153 +
Chr2	stalkie_big_nohaplotig	CDS	49930979	49931335	.	-	0	Parent=comp163283_c4_seq1.mrna1;Target=comp163283_c4_seq1 6731 7087 +
Chr2	stalkie_big_nohaplotig	CDS	49931447	49931719	.	-	0	Parent=comp163283_c4_seq1.mrna1;Target=comp163283_c4_seq1 6458 6730 +
Chr2	stalkie_big_nohaplotig	CDS	49931787	49932491	.	-	0	Parent=comp163283_c4_seq1.mrna1;Target=comp163283_c4_seq1 5753 6457 +
Chr2	stalkie_big_nohaplotig	mRNA	49932483	49934408	.	-	.	ID=FBgn0085430.1.mrna1;geneID=FBgn0085430.1.path1;Name=FBgn0085430.1;Dir=sensecoverage=26.1;identity=99.6;matches=1112;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017210
Chr2	stalkie_big_nohaplotig	exon	49932483	49932816	100	-	.	Parent=FBgn0085430.1.mrna1;Target=FBgn0085430.1 783 1116 +
Chr2	stalkie_big_nohaplotig	exon	49933559	49934148	99	-	.	Parent=FBgn0085430.1.mrna1;Target=FBgn0085430.1 193 782 +
Chr2	stalkie_big_nohaplotig	exon	49934217	49934408	99	-	.	Parent=FBgn0085430.1.mrna1;Target=FBgn0085430.1 1 192 +
Chr2	stalkie_big_nohaplotig	CDS	49932483	49932816	.	-	1	Parent=FBgn0085430.1.mrna1;Target=FBgn0085430.1 783 1116 +
Chr2	stalkie_big_nohaplotig	CDS	49933559	49934148	.	-	0	Parent=FBgn0085430.1.mrna1;Target=FBgn0085430.1 193 782 +
Chr2	stalkie_big_nohaplotig	CDS	49934217	49934408	.	-	0	Parent=FBgn0085430.1.mrna1;Target=FBgn0085430.1 1 192 +
Chr2	gffcl	locus	49848868	50146353	.	+	.	ID=RLOC_00017211;geneIDs=FBgn0033212.1.path1,comp159954_c1_seq1.path1;transcripts=comp159954_c1_seq1.mrna1,FBgn0033212.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49848868	50142532	.	+	.	ID=comp159954_c1_seq1.mrna1;geneID=comp159954_c1_seq1.path1;Name=comp159954_c1_seq1;Dir=antisensecoverage=90.3;identity=97.1;matches=3514;mismatches=87;indels=19;unknowns=0;locus=RLOC_00017211
Chr2	stalkie_big_nohaplotig	exon	49848868	49848878	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3761 3771 -
Chr2	stalkie_big_nohaplotig	exon	49852104	49852113	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3746 3755 -
Chr2	stalkie_big_nohaplotig	exon	49856300	49856304	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3741 3745 -
Chr2	stalkie_big_nohaplotig	exon	49860091	49860098	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3733 3740 -
Chr2	stalkie_big_nohaplotig	exon	49864811	49864814	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3729 3732 -
Chr2	stalkie_big_nohaplotig	exon	49865403	49865405	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3726 3728 -
Chr2	stalkie_big_nohaplotig	exon	49887288	49887294	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3719 3725 -
Chr2	stalkie_big_nohaplotig	exon	49894944	49894946	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3716 3718 -
Chr2	stalkie_big_nohaplotig	exon	49900573	49900575	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3713 3715 -
Chr2	stalkie_big_nohaplotig	exon	49923999	49924000	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3711 3712 -
Chr2	stalkie_big_nohaplotig	exon	49931364	49931370	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3704 3710 -
Chr2	stalkie_big_nohaplotig	exon	49934197	49934199	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3701 3703 -
Chr2	stalkie_big_nohaplotig	exon	49937841	49937858	94	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3684 3700 -
Chr2	stalkie_big_nohaplotig	exon	49940102	49940110	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3675 3683 -
Chr2	stalkie_big_nohaplotig	exon	49945144	49945150	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3668 3674 -
Chr2	stalkie_big_nohaplotig	exon	49951866	49951869	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3664 3667 -
Chr2	stalkie_big_nohaplotig	exon	49955416	49955419	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3660 3663 -
Chr2	stalkie_big_nohaplotig	exon	49966303	49966313	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3649 3659 -
Chr2	stalkie_big_nohaplotig	exon	49971610	49971615	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3643 3648 -
Chr2	stalkie_big_nohaplotig	exon	49977335	49977339	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3638 3642 -
Chr2	stalkie_big_nohaplotig	exon	49980761	49980768	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3630 3637 -
Chr2	stalkie_big_nohaplotig	exon	49981576	49981580	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3625 3629 -
Chr2	stalkie_big_nohaplotig	exon	49983354	49983365	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3595 3606 -
Chr2	stalkie_big_nohaplotig	exon	49991328	49991383	55	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3471 3524 -
Chr2	stalkie_big_nohaplotig	exon	50000071	50000075	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3466 3470 -
Chr2	stalkie_big_nohaplotig	exon	50001247	50001257	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3455 3465 -
Chr2	stalkie_big_nohaplotig	exon	50003887	50003909	65	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3435 3454 -
Chr2	stalkie_big_nohaplotig	exon	50008042	50008048	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3428 3434 -
Chr2	stalkie_big_nohaplotig	exon	50038412	50038473	49	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3353 3427 -
Chr2	stalkie_big_nohaplotig	exon	50097942	50097943	50	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3351 3352 -
Chr2	stalkie_big_nohaplotig	exon	50098188	50098192	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3346 3350 -
Chr2	stalkie_big_nohaplotig	exon	50098671	50098678	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3338 3345 -
Chr2	stalkie_big_nohaplotig	exon	50100938	50100941	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3334 3337 -
Chr2	stalkie_big_nohaplotig	exon	50101027	50101033	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3327 3333 -
Chr2	stalkie_big_nohaplotig	exon	50101272	50101277	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3321 3326 -
Chr2	stalkie_big_nohaplotig	exon	50101661	50101695	51	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3286 3320 -
Chr2	stalkie_big_nohaplotig	exon	50102973	50103071	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3121 3219 -
Chr2	stalkie_big_nohaplotig	exon	50114435	50114485	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3070 3120 -
Chr2	stalkie_big_nohaplotig	exon	50114553	50114681	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 2941 3069 -
Chr2	stalkie_big_nohaplotig	exon	50114789	50114872	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 2857 2940 -
Chr2	stalkie_big_nohaplotig	exon	50124583	50124719	99	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 2720 2856 -
Chr2	stalkie_big_nohaplotig	exon	50124793	50124882	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 2630 2719 -
Chr2	stalkie_big_nohaplotig	exon	50124951	50125112	99	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 2468 2629 -
Chr2	stalkie_big_nohaplotig	exon	50125185	50125282	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 2370 2467 -
Chr2	stalkie_big_nohaplotig	exon	50127705	50127892	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 2182 2369 -
Chr2	stalkie_big_nohaplotig	exon	50127958	50128035	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 2104 2181 -
Chr2	stalkie_big_nohaplotig	exon	50128101	50128282	98	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 1922 2103 -
Chr2	stalkie_big_nohaplotig	exon	50128342	50128493	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 1770 1921 -
Chr2	stalkie_big_nohaplotig	exon	50129919	50130170	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 1518 1769 -
Chr2	stalkie_big_nohaplotig	exon	50130242	50130974	99	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 785 1517 -
Chr2	stalkie_big_nohaplotig	exon	50135325	50135487	98	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 622 784 -
Chr2	stalkie_big_nohaplotig	exon	50140610	50140681	100	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 550 621 -
Chr2	stalkie_big_nohaplotig	exon	50141984	50142532	99	+	.	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 1 549 -
Chr2	stalkie_big_nohaplotig	CDS	50103024	50103071	.	+	0	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3121 3168 .
Chr2	stalkie_big_nohaplotig	CDS	50114435	50114485	.	+	0	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 3070 3120 .
Chr2	stalkie_big_nohaplotig	CDS	50114553	50114681	.	+	0	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 2941 3069 .
Chr2	stalkie_big_nohaplotig	CDS	50114789	50114872	.	+	0	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 2857 2940 .
Chr2	stalkie_big_nohaplotig	CDS	50124583	50124719	.	+	0	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 2720 2856 .
Chr2	stalkie_big_nohaplotig	CDS	50124793	50124882	.	+	1	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 2630 2719 .
Chr2	stalkie_big_nohaplotig	CDS	50124951	50125112	.	+	1	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 2468 2629 .
Chr2	stalkie_big_nohaplotig	CDS	50125185	50125282	.	+	1	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 2370 2467 .
Chr2	stalkie_big_nohaplotig	CDS	50127705	50127892	.	+	2	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 2182 2369 .
Chr2	stalkie_big_nohaplotig	CDS	50127958	50128035	.	+	0	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 2104 2181 .
Chr2	stalkie_big_nohaplotig	CDS	50128101	50128282	.	+	0	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 1922 2103 .
Chr2	stalkie_big_nohaplotig	CDS	50128342	50128493	.	+	1	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 1770 1921 .
Chr2	stalkie_big_nohaplotig	CDS	50129919	50130170	.	+	2	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 1518 1769 .
Chr2	stalkie_big_nohaplotig	CDS	50130242	50130974	.	+	2	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 785 1517 .
Chr2	stalkie_big_nohaplotig	CDS	50135325	50135487	.	+	1	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 622 784 .
Chr2	stalkie_big_nohaplotig	CDS	50140610	50140681	.	+	0	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 550 621 .
Chr2	stalkie_big_nohaplotig	CDS	50141984	50142532	.	+	0	Parent=comp159954_c1_seq1.mrna1;Target=comp159954_c1_seq1 1 549 .
Chr2	stalkie_big_nohaplotig	mRNA	50114435	50146353	.	+	.	ID=FBgn0033212.1.mrna1;geneID=FBgn0033212.1.path1;Name=FBgn0033212.1;Dir=sensecoverage=95.2;identity=99.4;matches=3909;mismatches=22;indels=0;unknowns=2;locus=RLOC_00017211
Chr2	stalkie_big_nohaplotig	exon	50114435	50114485	100	+	.	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 199 249 +
Chr2	stalkie_big_nohaplotig	exon	50114553	50114681	100	+	.	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 250 378 +
Chr2	stalkie_big_nohaplotig	exon	50114789	50114872	100	+	.	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 379 462 +
Chr2	stalkie_big_nohaplotig	exon	50124583	50124719	99	+	.	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 463 599 +
Chr2	stalkie_big_nohaplotig	exon	50124793	50124882	100	+	.	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 600 689 +
Chr2	stalkie_big_nohaplotig	exon	50124951	50125112	99	+	.	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 690 851 +
Chr2	stalkie_big_nohaplotig	exon	50125185	50125282	100	+	.	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 852 949 +
Chr2	stalkie_big_nohaplotig	exon	50127705	50127892	100	+	.	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 950 1137 +
Chr2	stalkie_big_nohaplotig	exon	50127958	50128035	100	+	.	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 1138 1215 +
Chr2	stalkie_big_nohaplotig	exon	50128101	50128282	98	+	.	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 1216 1397 +
Chr2	stalkie_big_nohaplotig	exon	50128342	50128493	100	+	.	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 1398 1549 +
Chr2	stalkie_big_nohaplotig	exon	50129919	50130170	100	+	.	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 1550 1801 +
Chr2	stalkie_big_nohaplotig	exon	50130242	50130974	99	+	.	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 1802 2534 +
Chr2	stalkie_big_nohaplotig	exon	50135325	50135487	98	+	.	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 2535 2697 +
Chr2	stalkie_big_nohaplotig	exon	50140610	50140681	100	+	.	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 2698 2769 +
Chr2	stalkie_big_nohaplotig	exon	50141984	50142572	99	+	.	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 2770 3358 +
Chr2	stalkie_big_nohaplotig	exon	50142777	50143157	98	+	.	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 3359 3739 +
Chr2	stalkie_big_nohaplotig	exon	50143218	50143337	100	+	.	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 3740 3859 +
Chr2	stalkie_big_nohaplotig	exon	50143398	50143454	100	+	.	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 3860 3916 +
Chr2	stalkie_big_nohaplotig	exon	50146139	50146353	98	+	.	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 3917 4131 +
Chr2	stalkie_big_nohaplotig	CDS	50114435	50114485	.	+	0	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 199 249 +
Chr2	stalkie_big_nohaplotig	CDS	50114553	50114681	.	+	0	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 250 378 +
Chr2	stalkie_big_nohaplotig	CDS	50114789	50114872	.	+	0	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 379 462 +
Chr2	stalkie_big_nohaplotig	CDS	50124583	50124719	.	+	0	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 463 599 +
Chr2	stalkie_big_nohaplotig	CDS	50124793	50124882	.	+	1	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 600 689 +
Chr2	stalkie_big_nohaplotig	CDS	50124951	50125112	.	+	1	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 690 851 +
Chr2	stalkie_big_nohaplotig	CDS	50125185	50125282	.	+	1	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 852 949 +
Chr2	stalkie_big_nohaplotig	CDS	50127705	50127892	.	+	2	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 950 1137 +
Chr2	stalkie_big_nohaplotig	CDS	50127958	50128035	.	+	0	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 1138 1215 +
Chr2	stalkie_big_nohaplotig	CDS	50128101	50128282	.	+	0	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 1216 1397 +
Chr2	stalkie_big_nohaplotig	CDS	50128342	50128493	.	+	1	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 1398 1549 +
Chr2	stalkie_big_nohaplotig	CDS	50129919	50130170	.	+	2	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 1550 1801 +
Chr2	stalkie_big_nohaplotig	CDS	50130242	50130974	.	+	2	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 1802 2534 +
Chr2	stalkie_big_nohaplotig	CDS	50135325	50135487	.	+	1	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 2535 2697 +
Chr2	stalkie_big_nohaplotig	CDS	50140610	50140681	.	+	0	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 2698 2769 +
Chr2	stalkie_big_nohaplotig	CDS	50141984	50142572	.	+	0	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 2770 3358 +
Chr2	stalkie_big_nohaplotig	CDS	50142777	50143157	.	+	2	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 3359 3739 +
Chr2	stalkie_big_nohaplotig	CDS	50143218	50143337	.	+	2	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 3740 3859 +
Chr2	stalkie_big_nohaplotig	CDS	50143398	50143454	.	+	2	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 3860 3916 +
Chr2	stalkie_big_nohaplotig	CDS	50146139	50146353	.	+	2	Parent=FBgn0033212.1.mrna1;Target=FBgn0033212.1 3917 4131 +
Chr2	gffcl	locus	49858192	49858709	.	-	.	ID=RLOC_00017212;geneIDs=comp74394_c1_seq1.path1;transcripts=comp74394_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49858192	49858709	.	-	.	ID=comp74394_c1_seq1.mrna1;geneID=comp74394_c1_seq1.path1;Name=comp74394_c1_seq1;Dir=indeterminatecoverage=68.1;identity=83.8;matches=450;mismatches=67;indels=20;unknowns=0;Target=comp74394_c1_seq1 540 5 .;CDS_Target=comp74394_c1_seq1 438 412 .;locus=RLOC_00017212
Chr2	stalkie_big_nohaplotig	exon	49858192	49858709	83	-	.	Parent=comp74394_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	49858294	49858320	.	-	0	Parent=comp74394_c1_seq1.mrna1
Chr2	gffcl	locus	49909986	49910669	.	-	.	ID=RLOC_00017213;geneIDs=comp118577_c0_seq1.path1;transcripts=comp118577_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49909986	49910669	.	-	.	ID=comp118577_c0_seq1.mrna1;geneID=comp118577_c0_seq1.path1;Name=comp118577_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=683;mismatches=1;indels=3;unknowns=0;Target=comp118577_c0_seq1 687 1 .;CDS_Target=comp118577_c0_seq1 72 1 .;locus=RLOC_00017213
Chr2	stalkie_big_nohaplotig	exon	49909986	49910669	99	-	.	Parent=comp118577_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	49910599	49910669	.	-	0	Parent=comp118577_c0_seq1.mrna1
Chr2	gffcl	locus	49910704	49911549	.	-	.	ID=RLOC_00017214;geneIDs=comp115710_c0_seq1.path1;transcripts=comp115710_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49910704	49911549	.	-	.	ID=comp115710_c0_seq1.mrna1;geneID=comp115710_c0_seq1.path1;Name=comp115710_c0_seq1;Dir=indeterminatecoverage=98.3;identity=98.7;matches=699;mismatches=7;indels=2;unknowns=0;locus=RLOC_00017214
Chr2	stalkie_big_nohaplotig	exon	49910704	49911356	98	-	.	Parent=comp115710_c0_seq1.mrna1;Target=comp115710_c0_seq1 719 67 .
Chr2	stalkie_big_nohaplotig	exon	49911496	49911549	96	-	.	Parent=comp115710_c0_seq1.mrna1;Target=comp115710_c0_seq1 66 13 .
Chr2	stalkie_big_nohaplotig	CDS	49911335	49911356	.	-	0	Parent=comp115710_c0_seq1.mrna1;Target=comp115710_c0_seq1 87 67 .
Chr2	stalkie_big_nohaplotig	CDS	49911496	49911549	.	-	0	Parent=comp115710_c0_seq1.mrna1;Target=comp115710_c0_seq1 66 13 .
Chr2	gffcl	locus	49912518	49913623	.	-	.	ID=RLOC_00017215;geneIDs=comp161768_c0_seq1.path1;transcripts=comp161768_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49912518	49913623	.	-	.	ID=comp161768_c0_seq1.mrna1;geneID=comp161768_c0_seq1.path1;Name=comp161768_c0_seq1;Dir=indeterminatecoverage=99.1;identity=95.9;matches=1064;mismatches=41;indels=4;unknowns=0;Target=comp161768_c0_seq1 1118 11 .;CDS_Target=comp161768_c0_seq1 42 13 .;locus=RLOC_00017215
Chr2	stalkie_big_nohaplotig	exon	49912518	49913623	95	-	.	Parent=comp161768_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	49913594	49913621	.	-	0	Parent=comp161768_c0_seq1.mrna1
Chr2	gffcl	locus	49934439	50023821	.	-	.	ID=RLOC_00017216;geneIDs=comp159118_c0_seq1.path1;transcripts=comp159118_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	49934439	50023821	.	-	.	ID=comp159118_c0_seq1.mrna1;geneID=comp159118_c0_seq1.path1;Name=comp159118_c0_seq1;Dir=sensecoverage=100.0;identity=98.8;matches=2828;mismatches=21;indels=14;unknowns=0;locus=RLOC_00017216
Chr2	stalkie_big_nohaplotig	exon	49934439	49934704	98	-	.	Parent=comp159118_c0_seq1.mrna1;Target=comp159118_c0_seq1 2596 2861 +
Chr2	stalkie_big_nohaplotig	exon	49936067	49936306	99	-	.	Parent=comp159118_c0_seq1.mrna1;Target=comp159118_c0_seq1 2356 2595 +
Chr2	stalkie_big_nohaplotig	exon	49936392	49936794	97	-	.	Parent=comp159118_c0_seq1.mrna1;Target=comp159118_c0_seq1 1942 2355 +
Chr2	stalkie_big_nohaplotig	exon	49970483	49971002	99	-	.	Parent=comp159118_c0_seq1.mrna1;Target=comp159118_c0_seq1 1422 1941 +
Chr2	stalkie_big_nohaplotig	exon	50017083	50018008	98	-	.	Parent=comp159118_c0_seq1.mrna1;Target=comp159118_c0_seq1 496 1421 +
Chr2	stalkie_big_nohaplotig	exon	50023326	50023821	98	-	.	Parent=comp159118_c0_seq1.mrna1;Target=comp159118_c0_seq1 1 495 +
Chr2	stalkie_big_nohaplotig	CDS	49934439	49934704	.	-	2	Parent=comp159118_c0_seq1.mrna1;Target=comp159118_c0_seq1 2596 2861 +
Chr2	stalkie_big_nohaplotig	CDS	49936067	49936306	.	-	2	Parent=comp159118_c0_seq1.mrna1;Target=comp159118_c0_seq1 2356 2595 +
Chr2	stalkie_big_nohaplotig	CDS	49936392	49936533	.	-	0	Parent=comp159118_c0_seq1.mrna1;Target=comp159118_c0_seq1 2214 2355 +
Chr2	gffcl	locus	50027861	50030115	.	-	.	ID=RLOC_00017217;geneIDs=FBgn0086712.1.path1;transcripts=FBgn0086712.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50027861	50030115	.	-	.	ID=FBgn0086712.1.mrna1;geneID=FBgn0086712.1.path1;Name=FBgn0086712.1;Dir=sensecoverage=100.0;identity=98.8;matches=1966;mismatches=23;indels=0;unknowns=0;locus=RLOC_00017217
Chr2	stalkie_big_nohaplotig	exon	50027861	50028382	99	-	.	Parent=FBgn0086712.1.mrna1;Target=FBgn0086712.1 1468 1989 +
Chr2	stalkie_big_nohaplotig	exon	50028449	50028634	99	-	.	Parent=FBgn0086712.1.mrna1;Target=FBgn0086712.1 1282 1467 +
Chr2	stalkie_big_nohaplotig	exon	50028712	50028850	98	-	.	Parent=FBgn0086712.1.mrna1;Target=FBgn0086712.1 1143 1281 +
Chr2	stalkie_big_nohaplotig	exon	50028911	50029415	98	-	.	Parent=FBgn0086712.1.mrna1;Target=FBgn0086712.1 638 1142 +
Chr2	stalkie_big_nohaplotig	exon	50029479	50030115	98	-	.	Parent=FBgn0086712.1.mrna1;Target=FBgn0086712.1 1 637 +
Chr2	stalkie_big_nohaplotig	CDS	50027861	50028382	.	-	0	Parent=FBgn0086712.1.mrna1;Target=FBgn0086712.1 1468 1989 +
Chr2	stalkie_big_nohaplotig	CDS	50028449	50028634	.	-	0	Parent=FBgn0086712.1.mrna1;Target=FBgn0086712.1 1282 1467 +
Chr2	stalkie_big_nohaplotig	CDS	50028712	50028850	.	-	1	Parent=FBgn0086712.1.mrna1;Target=FBgn0086712.1 1143 1281 +
Chr2	stalkie_big_nohaplotig	CDS	50028911	50029415	.	-	2	Parent=FBgn0086712.1.mrna1;Target=FBgn0086712.1 638 1142 +
Chr2	stalkie_big_nohaplotig	CDS	50029479	50030115	.	-	0	Parent=FBgn0086712.1.mrna1;Target=FBgn0086712.1 1 637 +
Chr2	gffcl	locus	50030527	50033367	.	+	.	ID=RLOC_00017218;geneIDs=FBgn0035064.1.path1;transcripts=FBgn0035064.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50030527	50033367	.	+	.	ID=FBgn0035064.1.mrna1;geneID=FBgn0035064.1.path1;Name=FBgn0035064.1;Dir=sensecoverage=100.0;identity=99.2;matches=1387;mismatches=11;indels=0;unknowns=0;locus=RLOC_00017218
Chr2	stalkie_big_nohaplotig	exon	50030527	50030669	98	+	.	Parent=FBgn0035064.1.mrna1;Target=FBgn0035064.1 1 143 +
Chr2	stalkie_big_nohaplotig	exon	50030736	50030883	99	+	.	Parent=FBgn0035064.1.mrna1;Target=FBgn0035064.1 144 291 +
Chr2	stalkie_big_nohaplotig	exon	50032085	50032269	98	+	.	Parent=FBgn0035064.1.mrna1;Target=FBgn0035064.1 292 476 +
Chr2	stalkie_big_nohaplotig	exon	50032331	50032902	99	+	.	Parent=FBgn0035064.1.mrna1;Target=FBgn0035064.1 477 1048 +
Chr2	stalkie_big_nohaplotig	exon	50032960	50033148	100	+	.	Parent=FBgn0035064.1.mrna1;Target=FBgn0035064.1 1049 1237 +
Chr2	stalkie_big_nohaplotig	exon	50033207	50033367	98	+	.	Parent=FBgn0035064.1.mrna1;Target=FBgn0035064.1 1238 1398 +
Chr2	stalkie_big_nohaplotig	CDS	50030527	50030669	.	+	0	Parent=FBgn0035064.1.mrna1;Target=FBgn0035064.1 1 143 +
Chr2	stalkie_big_nohaplotig	CDS	50030736	50030883	.	+	1	Parent=FBgn0035064.1.mrna1;Target=FBgn0035064.1 144 291 +
Chr2	stalkie_big_nohaplotig	CDS	50032085	50032269	.	+	0	Parent=FBgn0035064.1.mrna1;Target=FBgn0035064.1 292 476 +
Chr2	stalkie_big_nohaplotig	CDS	50032331	50032902	.	+	1	Parent=FBgn0035064.1.mrna1;Target=FBgn0035064.1 477 1048 +
Chr2	stalkie_big_nohaplotig	CDS	50032960	50033148	.	+	2	Parent=FBgn0035064.1.mrna1;Target=FBgn0035064.1 1049 1237 +
Chr2	stalkie_big_nohaplotig	CDS	50033207	50033367	.	+	2	Parent=FBgn0035064.1.mrna1;Target=FBgn0035064.1 1238 1398 +
Chr2	gffcl	locus	50033468	50034253	.	-	.	ID=RLOC_00017219;geneIDs=FBgn0035063.1.path1;transcripts=FBgn0035063.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50033468	50034253	.	-	.	ID=FBgn0035063.1.mrna1;geneID=FBgn0035063.1.path1;Name=FBgn0035063.1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=774;mismatches=12;indels=0;unknowns=0;Target=FBgn0035063.1 786 1 .;locus=RLOC_00017219
Chr2	stalkie_big_nohaplotig	exon	50033468	50034253	98	-	.	Parent=FBgn0035063.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	50033468	50034253	.	-	0	Parent=FBgn0035063.1.mrna1
Chr2	gffcl	locus	50042106	50042652	.	-	.	ID=RLOC_00017221;geneIDs=FBgn0035032.1.path1;transcripts=FBgn0035032.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50042106	50042652	.	-	.	ID=FBgn0035032.1.mrna1;geneID=FBgn0035032.1.path1;Name=FBgn0035032.1;Dir=sensecoverage=100.0;identity=99.7;matches=359;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017221
Chr2	stalkie_big_nohaplotig	exon	50042106	50042347	99	-	.	Parent=FBgn0035032.1.mrna1;Target=FBgn0035032.1 119 360 +
Chr2	stalkie_big_nohaplotig	exon	50042473	50042554	100	-	.	Parent=FBgn0035032.1.mrna1;Target=FBgn0035032.1 37 118 +
Chr2	stalkie_big_nohaplotig	exon	50042617	50042652	100	-	.	Parent=FBgn0035032.1.mrna1;Target=FBgn0035032.1 1 36 +
Chr2	stalkie_big_nohaplotig	CDS	50042106	50042347	.	-	2	Parent=FBgn0035032.1.mrna1;Target=FBgn0035032.1 119 360 +
Chr2	stalkie_big_nohaplotig	CDS	50042473	50042554	.	-	0	Parent=FBgn0035032.1.mrna1;Target=FBgn0035032.1 37 118 +
Chr2	stalkie_big_nohaplotig	CDS	50042617	50042652	.	-	0	Parent=FBgn0035032.1.mrna1;Target=FBgn0035032.1 1 36 +
Chr2	gffcl	locus	50043139	50046393	.	+	.	ID=RLOC_00017222;geneIDs=FBgn0035033.1.path1;transcripts=FBgn0035033.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50043139	50046393	.	+	.	ID=FBgn0035033.1.mrna1;geneID=FBgn0035033.1.path1;Name=FBgn0035033.1;Dir=sensecoverage=100.0;identity=99.6;matches=1303;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017222
Chr2	stalkie_big_nohaplotig	exon	50043139	50043471	100	+	.	Parent=FBgn0035033.1.mrna1;Target=FBgn0035033.1 1 333 +
Chr2	stalkie_big_nohaplotig	exon	50043535	50043644	99	+	.	Parent=FBgn0035033.1.mrna1;Target=FBgn0035033.1 334 443 +
Chr2	stalkie_big_nohaplotig	exon	50043727	50044165	99	+	.	Parent=FBgn0035033.1.mrna1;Target=FBgn0035033.1 444 882 +
Chr2	stalkie_big_nohaplotig	exon	50045968	50046393	99	+	.	Parent=FBgn0035033.1.mrna1;Target=FBgn0035033.1 883 1308 +
Chr2	stalkie_big_nohaplotig	CDS	50043139	50043471	.	+	0	Parent=FBgn0035033.1.mrna1;Target=FBgn0035033.1 1 333 +
Chr2	stalkie_big_nohaplotig	CDS	50043535	50043644	.	+	0	Parent=FBgn0035033.1.mrna1;Target=FBgn0035033.1 334 443 +
Chr2	stalkie_big_nohaplotig	CDS	50043727	50044165	.	+	1	Parent=FBgn0035033.1.mrna1;Target=FBgn0035033.1 444 882 +
Chr2	stalkie_big_nohaplotig	CDS	50045968	50046393	.	+	0	Parent=FBgn0035033.1.mrna1;Target=FBgn0035033.1 883 1308 +
Chr2	gffcl	locus	50075964	50077256	.	+	.	ID=RLOC_00017223;geneIDs=comp148191_c0_seq1.path1;transcripts=comp148191_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50075964	50077256	.	+	.	ID=comp148191_c0_seq1.mrna1;geneID=comp148191_c0_seq1.path1;Name=comp148191_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=1278;mismatches=15;indels=3;unknowns=0;Target=comp148191_c0_seq1 1296 1 .;CDS_Target=comp148191_c0_seq1 422 321 .;locus=RLOC_00017223
Chr2	stalkie_big_nohaplotig	exon	50075964	50077256	98	+	.	Parent=comp148191_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	50076281	50076382	.	+	0	Parent=comp148191_c0_seq1.mrna1
Chr2	gffcl	locus	50149306	50154385	.	+	.	ID=RLOC_00017224;geneIDs=comp161743_c0_seq1.path1;transcripts=comp161743_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50149306	50154385	.	+	.	ID=comp161743_c0_seq1.mrna1;geneID=comp161743_c0_seq1.path1;Name=comp161743_c0_seq1;Dir=indeterminatecoverage=90.6;identity=89.2;matches=1285;mismatches=50;indels=106;unknowns=0;Target=comp161743_c0_seq1 1107 967 .;locus=RLOC_00017224
Chr2	stalkie_big_nohaplotig	exon	50149306	50149507	94	+	.	Parent=comp161743_c0_seq1.mrna1;Target=comp161743_c0_seq1 349 147 .
Chr2	stalkie_big_nohaplotig	exon	50153226	50154385	88	+	.	Parent=comp161743_c0_seq1.mrna1;Target=comp161743_c0_seq1 1560 350 .
Chr2	stalkie_big_nohaplotig	CDS	50153845	50153957	.	+	0	Parent=comp161743_c0_seq1.mrna1
Chr2	gffcl	locus	50156753	50157532	.	+	.	ID=RLOC_00017226;geneIDs=FBgn0033210.1.path1;transcripts=FBgn0033210.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50156753	50157532	.	+	.	ID=FBgn0033210.1.mrna1;geneID=FBgn0033210.1.path1;Name=FBgn0033210.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=775;mismatches=5;indels=0;unknowns=0;Target=FBgn0033210.1 780 1 .;locus=RLOC_00017226
Chr2	stalkie_big_nohaplotig	exon	50156753	50157532	99	+	.	Parent=FBgn0033210.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	50156753	50157532	.	+	0	Parent=FBgn0033210.1.mrna1
Chr2	gffcl	locus	50157999	50158561	.	-	.	ID=RLOC_00017227;geneIDs=FBgn0033209.1.path1;transcripts=FBgn0033209.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50157999	50158561	.	-	.	ID=FBgn0033209.1.mrna1;geneID=FBgn0033209.1.path1;Name=FBgn0033209.1;Dir=sensecoverage=100.0;identity=99.5;matches=415;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017227
Chr2	stalkie_big_nohaplotig	exon	50157999	50158188	98	-	.	Parent=FBgn0033209.1.mrna1;Target=FBgn0033209.1 228 417 +
Chr2	stalkie_big_nohaplotig	exon	50158247	50158350	100	-	.	Parent=FBgn0033209.1.mrna1;Target=FBgn0033209.1 124 227 +
Chr2	stalkie_big_nohaplotig	exon	50158439	50158561	100	-	.	Parent=FBgn0033209.1.mrna1;Target=FBgn0033209.1 1 123 +
Chr2	stalkie_big_nohaplotig	CDS	50157999	50158188	.	-	1	Parent=FBgn0033209.1.mrna1;Target=FBgn0033209.1 228 417 +
Chr2	stalkie_big_nohaplotig	CDS	50158247	50158350	.	-	0	Parent=FBgn0033209.1.mrna1;Target=FBgn0033209.1 124 227 +
Chr2	stalkie_big_nohaplotig	CDS	50158439	50158561	.	-	0	Parent=FBgn0033209.1.mrna1;Target=FBgn0033209.1 1 123 +
Chr2	gffcl	locus	50160537	50161844	.	-	.	ID=RLOC_00017228;geneIDs=FBgn0040347.1.path1;transcripts=FBgn0040347.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50160537	50161844	.	-	.	ID=FBgn0040347.1.mrna1;geneID=FBgn0040347.1.path1;Name=FBgn0040347.1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1293;mismatches=15;indels=0;unknowns=0;Target=FBgn0040347.1 1308 1 .;locus=RLOC_00017228
Chr2	stalkie_big_nohaplotig	exon	50160537	50161844	98	-	.	Parent=FBgn0040347.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	50160537	50161844	.	-	0	Parent=FBgn0040347.1.mrna1
Chr2	gffcl	locus	50162072	50162616	.	+	.	ID=RLOC_00017229;geneIDs=FBgn0033208.1.path1;transcripts=FBgn0033208.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50162072	50162616	.	+	.	ID=FBgn0033208.1.mrna1;geneID=FBgn0033208.1.path1;Name=FBgn0033208.1;Dir=sensecoverage=100.0;identity=96.6;matches=420;mismatches=15;indels=0;unknowns=0;locus=RLOC_00017229
Chr2	stalkie_big_nohaplotig	exon	50162072	50162168	94	+	.	Parent=FBgn0033208.1.mrna1;Target=FBgn0033208.1 1 97 +
Chr2	stalkie_big_nohaplotig	exon	50162223	50162377	96	+	.	Parent=FBgn0033208.1.mrna1;Target=FBgn0033208.1 98 252 +
Chr2	stalkie_big_nohaplotig	exon	50162434	50162616	97	+	.	Parent=FBgn0033208.1.mrna1;Target=FBgn0033208.1 253 435 +
Chr2	stalkie_big_nohaplotig	CDS	50162072	50162168	.	+	0	Parent=FBgn0033208.1.mrna1;Target=FBgn0033208.1 1 97 +
Chr2	stalkie_big_nohaplotig	CDS	50162223	50162377	.	+	2	Parent=FBgn0033208.1.mrna1;Target=FBgn0033208.1 98 252 +
Chr2	stalkie_big_nohaplotig	CDS	50162434	50162616	.	+	0	Parent=FBgn0033208.1.mrna1;Target=FBgn0033208.1 253 435 +
Chr2	gffcl	locus	50175739	50176917	.	+	.	ID=RLOC_00017230;geneIDs=comp151821_c0_seq1.path1;transcripts=comp151821_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50175739	50176917	.	+	.	ID=comp151821_c0_seq1.mrna1;geneID=comp151821_c0_seq1.path1;Name=comp151821_c0_seq1;Dir=sensecoverage=98.5;identity=99.8;matches=977;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017230
Chr2	stalkie_big_nohaplotig	exon	50175739	50175977	100	+	.	Parent=comp151821_c0_seq1.mrna1;Target=comp151821_c0_seq1 12 250 +
Chr2	stalkie_big_nohaplotig	exon	50176178	50176917	99	+	.	Parent=comp151821_c0_seq1.mrna1;Target=comp151821_c0_seq1 251 990 +
Chr2	stalkie_big_nohaplotig	CDS	50175966	50175977	.	+	0	Parent=comp151821_c0_seq1.mrna1;Target=comp151821_c0_seq1 239 250 +
Chr2	stalkie_big_nohaplotig	CDS	50176178	50176540	.	+	0	Parent=comp151821_c0_seq1.mrna1;Target=comp151821_c0_seq1 251 613 +
Chr2	gffcl	locus	50183307	50184254	.	+	.	ID=RLOC_00017231;geneIDs=FBgn0050398.1.path1;transcripts=FBgn0050398.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50183307	50184254	.	+	.	ID=FBgn0050398.1.mrna1;geneID=FBgn0050398.1.path1;Name=FBgn0050398.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=940;mismatches=8;indels=0;unknowns=0;Target=FBgn0050398.1 948 1 .;locus=RLOC_00017231
Chr2	stalkie_big_nohaplotig	exon	50183307	50184254	99	+	.	Parent=FBgn0050398.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	50183307	50184254	.	+	0	Parent=FBgn0050398.1.mrna1
Chr2	gffcl	locus	50204944	50219088	.	+	.	ID=RLOC_00017232;geneIDs=FBgn0034140.1.path1;transcripts=FBgn0034140.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50204944	50219088	.	+	.	ID=FBgn0034140.1.mrna1;geneID=FBgn0034140.1.path1;Name=FBgn0034140.1;Dir=sensecoverage=100.0;identity=100.0;matches=549;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017232
Chr2	stalkie_big_nohaplotig	exon	50204944	50205102	100	+	.	Parent=FBgn0034140.1.mrna1;Target=FBgn0034140.1 1 159 +
Chr2	stalkie_big_nohaplotig	exon	50218699	50219088	100	+	.	Parent=FBgn0034140.1.mrna1;Target=FBgn0034140.1 160 549 +
Chr2	stalkie_big_nohaplotig	CDS	50204944	50205102	.	+	0	Parent=FBgn0034140.1.mrna1;Target=FBgn0034140.1 1 159 +
Chr2	stalkie_big_nohaplotig	CDS	50218699	50219088	.	+	0	Parent=FBgn0034140.1.mrna1;Target=FBgn0034140.1 160 549 +
Chr2	gffcl	locus	50221118	50221612	.	-	.	ID=RLOC_00017233;geneIDs=comp117212_c0_seq1.path1;transcripts=comp117212_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50221118	50221612	.	-	.	ID=comp117212_c0_seq1.mrna1;geneID=comp117212_c0_seq1.path1;Name=comp117212_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=430;mismatches=1;indels=0;unknowns=0;Target=comp117212_c0_seq1 3 11 +;locus=RLOC_00017233
Chr2	stalkie_big_nohaplotig	exon	50221118	50221498	100	-	.	Parent=comp117212_c0_seq1.mrna1;Target=comp117212_c0_seq1 51 431 +
Chr2	stalkie_big_nohaplotig	exon	50221563	50221612	98	-	.	Parent=comp117212_c0_seq1.mrna1;Target=comp117212_c0_seq1 1 50 +
Chr2	stalkie_big_nohaplotig	CDS	50221602	50221610	.	-	0	Parent=comp117212_c0_seq1.mrna1
Chr2	gffcl	locus	50228832	50233750	.	-	.	ID=RLOC_00017234;geneIDs=comp135433_c0_seq1.path1;transcripts=comp135433_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50228832	50233750	.	-	.	ID=comp135433_c0_seq1.mrna1;geneID=comp135433_c0_seq1.path1;Name=comp135433_c0_seq1;Dir=antisensecoverage=89.9;identity=98.8;matches=425;mismatches=2;indels=3;unknowns=0;locus=RLOC_00017234
Chr2	stalkie_big_nohaplotig	exon	50228832	50228939	100	-	.	Parent=comp135433_c0_seq1.mrna1;Target=comp135433_c0_seq1 48 155 -
Chr2	stalkie_big_nohaplotig	exon	50233369	50233615	97	-	.	Parent=comp135433_c0_seq1.mrna1;Target=comp135433_c0_seq1 156 399 -
Chr2	stalkie_big_nohaplotig	exon	50233676	50233750	100	-	.	Parent=comp135433_c0_seq1.mrna1;Target=comp135433_c0_seq1 400 474 -
Chr2	stalkie_big_nohaplotig	CDS	50228884	50228939	.	-	2	Parent=comp135433_c0_seq1.mrna1;Target=comp135433_c0_seq1 100 155 .
Chr2	stalkie_big_nohaplotig	CDS	50233369	50233615	.	-	0	Parent=comp135433_c0_seq1.mrna1;Target=comp135433_c0_seq1 156 399 .
Chr2	stalkie_big_nohaplotig	CDS	50233676	50233690	.	-	0	Parent=comp135433_c0_seq1.mrna1;Target=comp135433_c0_seq1 400 414 .
Chr2	gffcl	locus	50239968	50241141	.	-	.	ID=RLOC_00017235;geneIDs=FBgn0262534.2.path2;transcripts=FBgn0262534.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	50239968	50241141	.	-	.	ID=FBgn0262534.2.mrna2;geneID=FBgn0262534.2.path2;Name=FBgn0262534.2;Dir=sensecoverage=100.0;identity=99.3;matches=1055;mismatches=7;indels=0;unknowns=0;locus=RLOC_00017235
Chr2	stalkie_big_nohaplotig	exon	50239968	50240468	99	-	.	Parent=FBgn0262534.2.mrna2;Target=FBgn0262534.2 562 1062 +
Chr2	stalkie_big_nohaplotig	exon	50240527	50240953	99	-	.	Parent=FBgn0262534.2.mrna2;Target=FBgn0262534.2 135 561 +
Chr2	stalkie_big_nohaplotig	exon	50241008	50241141	99	-	.	Parent=FBgn0262534.2.mrna2;Target=FBgn0262534.2 1 134 +
Chr2	stalkie_big_nohaplotig	CDS	50239968	50240468	.	-	0	Parent=FBgn0262534.2.mrna2;Target=FBgn0262534.2 562 1062 +
Chr2	stalkie_big_nohaplotig	CDS	50240527	50240953	.	-	1	Parent=FBgn0262534.2.mrna2;Target=FBgn0262534.2 135 561 +
Chr2	stalkie_big_nohaplotig	CDS	50241008	50241141	.	-	0	Parent=FBgn0262534.2.mrna2;Target=FBgn0262534.2 1 134 +
Chr2	gffcl	locus	50246486	50247487	.	+	.	ID=RLOC_00017236;geneIDs=comp148139_c0_seq1.path1;transcripts=comp148139_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50246486	50247487	.	+	.	ID=comp148139_c0_seq1.mrna1;geneID=comp148139_c0_seq1.path1;Name=comp148139_c0_seq1;Dir=antisensecoverage=100.0;identity=97.7;matches=812;mismatches=17;indels=2;unknowns=0;locus=RLOC_00017236
Chr2	stalkie_big_nohaplotig	exon	50246486	50246584	96	+	.	Parent=comp148139_c0_seq1.mrna1;Target=comp148139_c0_seq1 731 829 -
Chr2	stalkie_big_nohaplotig	exon	50246756	50247487	97	+	.	Parent=comp148139_c0_seq1.mrna1;Target=comp148139_c0_seq1 1 730 -
Chr2	stalkie_big_nohaplotig	CDS	50246573	50246584	.	+	0	Parent=comp148139_c0_seq1.mrna1;Target=comp148139_c0_seq1 731 742 .
Chr2	stalkie_big_nohaplotig	CDS	50246756	50247118	.	+	0	Parent=comp148139_c0_seq1.mrna1;Target=comp148139_c0_seq1 368 730 .
Chr2	gffcl	locus	50257129	50259412	.	-	.	ID=RLOC_00017237;geneIDs=comp152579_c0_seq1.path1;transcripts=comp152579_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50257129	50259412	.	-	.	ID=comp152579_c0_seq1.mrna1;geneID=comp152579_c0_seq1.path1;Name=comp152579_c0_seq1;Dir=sensecoverage=97.3;identity=99.0;matches=828;mismatches=8;indels=0;unknowns=0;locus=RLOC_00017237
Chr2	stalkie_big_nohaplotig	exon	50257129	50257460	98	-	.	Parent=comp152579_c0_seq1.mrna1;Target=comp152579_c0_seq1 505 836 +
Chr2	stalkie_big_nohaplotig	exon	50258838	50258921	100	-	.	Parent=comp152579_c0_seq1.mrna1;Target=comp152579_c0_seq1 421 504 +
Chr2	stalkie_big_nohaplotig	exon	50258993	50259412	99	-	.	Parent=comp152579_c0_seq1.mrna1;Target=comp152579_c0_seq1 1 420 +
Chr2	stalkie_big_nohaplotig	CDS	50257218	50257460	.	-	0	Parent=comp152579_c0_seq1.mrna1;Target=comp152579_c0_seq1 505 747 +
Chr2	stalkie_big_nohaplotig	CDS	50258838	50258921	.	-	0	Parent=comp152579_c0_seq1.mrna1;Target=comp152579_c0_seq1 421 504 +
Chr2	stalkie_big_nohaplotig	CDS	50258993	50259001	.	-	0	Parent=comp152579_c0_seq1.mrna1;Target=comp152579_c0_seq1 412 420 +
Chr2	gffcl	locus	50257571	50258085	.	+	.	ID=RLOC_00017238;geneIDs=comp139155_c0_seq1.path1;transcripts=comp139155_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50257571	50258085	.	+	.	ID=comp139155_c0_seq1.mrna1;geneID=comp139155_c0_seq1.path1;Name=comp139155_c0_seq1;Dir=indeterminatecoverage=97.7;identity=86.3;matches=480;mismatches=34;indels=42;unknowns=0;Target=comp139155_c0_seq1 568 14 .;CDS_Target=comp139155_c0_seq1 525 313 .;locus=RLOC_00017238
Chr2	stalkie_big_nohaplotig	exon	50257571	50258085	86	+	.	Parent=comp139155_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	50257830	50258042	.	+	0	Parent=comp139155_c0_seq1.mrna1
Chr2	gffcl	locus	50272238	50272999	.	-	.	ID=RLOC_00017239;geneIDs=comp150993_c0_seq1.path1;transcripts=comp150993_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50272238	50272999	.	-	.	ID=comp150993_c0_seq1.mrna1;geneID=comp150993_c0_seq1.path1;Name=comp150993_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=760;mismatches=2;indels=1;unknowns=0;Target=comp150993_c0_seq1 763 1 .;CDS_Target=comp150993_c0_seq1 43 2 .;locus=RLOC_00017239
Chr2	stalkie_big_nohaplotig	exon	50272238	50272999	99	-	.	Parent=comp150993_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	50272958	50272998	.	-	0	Parent=comp150993_c0_seq1.mrna1
Chr2	gffcl	locus	50294432	50295495	.	+	.	ID=RLOC_00017240;geneIDs=FBgn0250746.2.path1;transcripts=FBgn0250746.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50294432	50295495	.	+	.	ID=FBgn0250746.2.mrna1;geneID=FBgn0250746.2.path1;Name=FBgn0250746.2;Dir=sensecoverage=100.0;identity=99.9;matches=854;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017240
Chr2	stalkie_big_nohaplotig	exon	50294432	50294559	100	+	.	Parent=FBgn0250746.2.mrna1;Target=FBgn0250746.2 1 128 +
Chr2	stalkie_big_nohaplotig	exon	50294637	50294708	100	+	.	Parent=FBgn0250746.2.mrna1;Target=FBgn0250746.2 129 200 +
Chr2	stalkie_big_nohaplotig	exon	50294777	50295278	100	+	.	Parent=FBgn0250746.2.mrna1;Target=FBgn0250746.2 201 702 +
Chr2	stalkie_big_nohaplotig	exon	50295343	50295495	99	+	.	Parent=FBgn0250746.2.mrna1;Target=FBgn0250746.2 703 855 +
Chr2	stalkie_big_nohaplotig	CDS	50294432	50294559	.	+	0	Parent=FBgn0250746.2.mrna1;Target=FBgn0250746.2 1 128 +
Chr2	stalkie_big_nohaplotig	CDS	50294637	50294708	.	+	1	Parent=FBgn0250746.2.mrna1;Target=FBgn0250746.2 129 200 +
Chr2	stalkie_big_nohaplotig	CDS	50294777	50295278	.	+	1	Parent=FBgn0250746.2.mrna1;Target=FBgn0250746.2 201 702 +
Chr2	stalkie_big_nohaplotig	CDS	50295343	50295495	.	+	0	Parent=FBgn0250746.2.mrna1;Target=FBgn0250746.2 703 855 +
Chr2	gffcl	locus	50298992	50300841	.	-	.	ID=RLOC_00017241;geneIDs=comp158655_c1_seq1.path1;transcripts=comp158655_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50298992	50300841	.	-	.	ID=comp158655_c1_seq1.mrna1;geneID=comp158655_c1_seq1.path1;Name=comp158655_c1_seq1;Dir=indeterminatecoverage=97.7;identity=99.2;matches=1836;mismatches=10;indels=4;unknowns=0;Target=comp158655_c1_seq1 1890 45 .;CDS_Target=comp158655_c1_seq1 472 278 .;locus=RLOC_00017241
Chr2	stalkie_big_nohaplotig	exon	50298992	50300841	99	-	.	Parent=comp158655_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	50300414	50300608	.	-	0	Parent=comp158655_c1_seq1.mrna1
Chr2	gffcl	locus	50351213	50351569	.	-	.	ID=RLOC_00017242;geneIDs=comp148902_c0_seq1.path1;transcripts=comp148902_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50351213	50351569	.	-	.	ID=comp148902_c0_seq1.mrna1;geneID=comp148902_c0_seq1.path1;Name=comp148902_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=353;mismatches=3;indels=1;unknowns=0;Target=comp148902_c0_seq1 356 1 .;CDS_Target=comp148902_c0_seq1 48 1 .;locus=RLOC_00017242
Chr2	stalkie_big_nohaplotig	exon	50351213	50351569	98	-	.	Parent=comp148902_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	50351521	50351569	.	-	0	Parent=comp148902_c0_seq1.mrna1
Chr2	gffcl	locus	50353525	50354707	.	+	.	ID=RLOC_00017243;geneIDs=comp161767_c0_seq1.path1;transcripts=comp161767_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50353525	50354707	.	+	.	ID=comp161767_c0_seq1.mrna1;geneID=comp161767_c0_seq1.path1;Name=comp161767_c0_seq1;Dir=indeterminatecoverage=99.9;identity=91.9;matches=1032;mismatches=57;indels=34;unknowns=0;Target=comp161767_c0_seq1 641 384 .;locus=RLOC_00017243
Chr2	stalkie_big_nohaplotig	exon	50353525	50353838	89	+	.	Parent=comp161767_c0_seq1.mrna1;Target=comp161767_c0_seq1 326 2 .
Chr2	stalkie_big_nohaplotig	exon	50353923	50354707	92	+	.	Parent=comp161767_c0_seq1.mrna1;Target=comp161767_c0_seq1 1114 327 .
Chr2	stalkie_big_nohaplotig	CDS	50353980	50354234	.	+	0	Parent=comp161767_c0_seq1.mrna1
Chr2	gffcl	locus	50378223	50378552	.	-	.	ID=RLOC_00017244;geneIDs=comp67710_c0_seq1.path1;transcripts=comp67710_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50378223	50378552	.	-	.	ID=comp67710_c0_seq1.mrna1;geneID=comp67710_c0_seq1.path1;Name=comp67710_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.3;matches=308;mismatches=22;indels=0;unknowns=0;Target=comp67710_c0_seq1 330 1 .;CDS_Target=comp67710_c0_seq1 328 227 .;locus=RLOC_00017244
Chr2	stalkie_big_nohaplotig	exon	50378223	50378552	93	-	.	Parent=comp67710_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	50378225	50378326	.	-	0	Parent=comp67710_c0_seq1.mrna1
Chr2	gffcl	locus	50379629	50586999	.	-	.	ID=RLOC_00017245;geneIDs=FBgn0263980.1.path1,comp161240_c1_seq1.path1;transcripts=comp161240_c1_seq1.mrna1,FBgn0263980.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50379629	50586999	.	-	.	ID=comp161240_c1_seq1.mrna1;geneID=comp161240_c1_seq1.path1;Name=comp161240_c1_seq1;Dir=antisensecoverage=92.4;identity=99.9;matches=2037;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017245
Chr2	stalkie_big_nohaplotig	exon	50379629	50380440	99	-	.	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1 812 -
Chr2	stalkie_big_nohaplotig	exon	50383499	50383501	100	-	.	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 813 815 -
Chr2	stalkie_big_nohaplotig	exon	50396391	50396400	100	-	.	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 847 856 -
Chr2	stalkie_big_nohaplotig	exon	50404561	50404564	100	-	.	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1012 1015 -
Chr2	stalkie_big_nohaplotig	exon	50404747	50404750	100	-	.	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1016 1019 -
Chr2	stalkie_big_nohaplotig	exon	50404757	50404764	100	-	.	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1064 1071 -
Chr2	stalkie_big_nohaplotig	exon	50418953	50418959	100	-	.	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1084 1090 -
Chr2	stalkie_big_nohaplotig	exon	50419396	50419398	100	-	.	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1091 1093 -
Chr2	stalkie_big_nohaplotig	exon	50432058	50432206	100	-	.	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1094 1242 -
Chr2	stalkie_big_nohaplotig	exon	50567948	50568094	100	-	.	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1243 1389 -
Chr2	stalkie_big_nohaplotig	exon	50568183	50568308	100	-	.	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1390 1515 -
Chr2	stalkie_big_nohaplotig	exon	50568391	50568573	100	-	.	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1516 1698 -
Chr2	stalkie_big_nohaplotig	exon	50581270	50581515	99	-	.	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1699 1944 -
Chr2	stalkie_big_nohaplotig	exon	50584792	50584908	100	-	.	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1945 2061 -
Chr2	stalkie_big_nohaplotig	exon	50586571	50586676	100	-	.	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 2062 2167 -
Chr2	stalkie_big_nohaplotig	exon	50586887	50586999	100	-	.	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 2168 2280 -
Chr2	stalkie_big_nohaplotig	CDS	50380202	50380440	.	-	1	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 574 812 .
Chr2	stalkie_big_nohaplotig	CDS	50383499	50383501	.	-	1	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 813 815 .
Chr2	stalkie_big_nohaplotig	CDS	50396391	50396400	.	-	2	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 847 856 .
Chr2	stalkie_big_nohaplotig	CDS	50404561	50404564	.	-	0	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1012 1015 .
Chr2	stalkie_big_nohaplotig	CDS	50404747	50404750	.	-	1	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1016 1019 .
Chr2	stalkie_big_nohaplotig	CDS	50404757	50404764	.	-	0	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1064 1071 .
Chr2	stalkie_big_nohaplotig	CDS	50418953	50418959	.	-	1	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1084 1090 .
Chr2	stalkie_big_nohaplotig	CDS	50419396	50419398	.	-	1	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1091 1093 .
Chr2	stalkie_big_nohaplotig	CDS	50432058	50432206	.	-	0	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1094 1242 .
Chr2	stalkie_big_nohaplotig	CDS	50567948	50568094	.	-	0	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1243 1389 .
Chr2	stalkie_big_nohaplotig	CDS	50568183	50568308	.	-	0	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1390 1515 .
Chr2	stalkie_big_nohaplotig	CDS	50568391	50568573	.	-	0	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1516 1698 .
Chr2	stalkie_big_nohaplotig	CDS	50581270	50581515	.	-	0	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1699 1944 .
Chr2	stalkie_big_nohaplotig	CDS	50584792	50584908	.	-	0	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 1945 2061 .
Chr2	stalkie_big_nohaplotig	CDS	50586571	50586676	.	-	1	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 2062 2167 .
Chr2	stalkie_big_nohaplotig	CDS	50586887	50586999	.	-	0	Parent=comp161240_c1_seq1.mrna1;Target=comp161240_c1_seq1 2168 2280 .
Chr2	stalkie_big_nohaplotig	mRNA	50380205	50586999	.	-	.	ID=FBgn0263980.1.mrna1;geneID=FBgn0263980.1.path1;Name=FBgn0263980.1;Dir=sensecoverage=90.2;identity=97.7;matches=1470;mismatches=25;indels=9;unknowns=0;locus=RLOC_00017245
Chr2	stalkie_big_nohaplotig	exon	50380205	50380440	100	-	.	Parent=FBgn0263980.1.mrna1;Target=FBgn0263980.1 1655 1890 +
Chr2	stalkie_big_nohaplotig	exon	50383499	50383501	100	-	.	Parent=FBgn0263980.1.mrna1;Target=FBgn0263980.1 1652 1654 +
Chr2	stalkie_big_nohaplotig	exon	50386644	50386719	56	-	.	Parent=FBgn0263980.1.mrna1;Target=FBgn0263980.1 1585 1651 +
Chr2	stalkie_big_nohaplotig	exon	50432057	50432206	100	-	.	Parent=FBgn0263980.1.mrna1;Target=FBgn0263980.1 1225 1374 +
Chr2	stalkie_big_nohaplotig	exon	50567948	50568094	100	-	.	Parent=FBgn0263980.1.mrna1;Target=FBgn0263980.1 1078 1224 +
Chr2	stalkie_big_nohaplotig	exon	50568183	50568308	100	-	.	Parent=FBgn0263980.1.mrna1;Target=FBgn0263980.1 952 1077 +
Chr2	stalkie_big_nohaplotig	exon	50568391	50568573	100	-	.	Parent=FBgn0263980.1.mrna1;Target=FBgn0263980.1 769 951 +
Chr2	stalkie_big_nohaplotig	exon	50581270	50581515	99	-	.	Parent=FBgn0263980.1.mrna1;Target=FBgn0263980.1 523 768 +
Chr2	stalkie_big_nohaplotig	exon	50584792	50584908	100	-	.	Parent=FBgn0263980.1.mrna1;Target=FBgn0263980.1 406 522 +
Chr2	stalkie_big_nohaplotig	exon	50586571	50586676	100	-	.	Parent=FBgn0263980.1.mrna1;Target=FBgn0263980.1 300 405 +
Chr2	stalkie_big_nohaplotig	exon	50586887	50586999	100	-	.	Parent=FBgn0263980.1.mrna1;Target=FBgn0263980.1 187 299 +
Chr2	stalkie_big_nohaplotig	CDS	50380205	50380440	.	-	2	Parent=FBgn0263980.1.mrna1;Target=FBgn0263980.1 1655 1890 +
Chr2	stalkie_big_nohaplotig	CDS	50383499	50383501	.	-	2	Parent=FBgn0263980.1.mrna1;Target=FBgn0263980.1 1652 1654 +
Chr2	stalkie_big_nohaplotig	CDS	50386644	50386719	.	-	0	Parent=FBgn0263980.1.mrna1;Target=FBgn0263980.1 1585 1651 +
Chr2	stalkie_big_nohaplotig	CDS	50432057	50432206	.	-	0	Parent=FBgn0263980.1.mrna1;Target=FBgn0263980.1 1225 1374 +
Chr2	stalkie_big_nohaplotig	CDS	50567948	50568094	.	-	0	Parent=FBgn0263980.1.mrna1;Target=FBgn0263980.1 1078 1224 +
Chr2	stalkie_big_nohaplotig	CDS	50568183	50568308	.	-	0	Parent=FBgn0263980.1.mrna1;Target=FBgn0263980.1 952 1077 +
Chr2	stalkie_big_nohaplotig	CDS	50568391	50568573	.	-	0	Parent=FBgn0263980.1.mrna1;Target=FBgn0263980.1 769 951 +
Chr2	stalkie_big_nohaplotig	CDS	50581270	50581515	.	-	0	Parent=FBgn0263980.1.mrna1;Target=FBgn0263980.1 523 768 +
Chr2	stalkie_big_nohaplotig	CDS	50584792	50584908	.	-	0	Parent=FBgn0263980.1.mrna1;Target=FBgn0263980.1 406 522 +
Chr2	stalkie_big_nohaplotig	CDS	50586571	50586676	.	-	1	Parent=FBgn0263980.1.mrna1;Target=FBgn0263980.1 300 405 +
Chr2	stalkie_big_nohaplotig	CDS	50586887	50586999	.	-	0	Parent=FBgn0263980.1.mrna1;Target=FBgn0263980.1 187 299 +
Chr2	gffcl	locus	50450905	50451957	.	-	.	ID=RLOC_00017246;geneIDs=ORF1582.path1;transcripts=ORF1582.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50450905	50451957	.	-	.	ID=ORF1582.mrna1;geneID=ORF1582.path1;Name=ORF1582;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1052;mismatches=1;indels=0;unknowns=0;Target=ORF1582 1053 1 .;locus=RLOC_00017246
Chr2	stalkie_big_nohaplotig	exon	50450905	50451957	99	-	.	Parent=ORF1582.mrna1
Chr2	stalkie_big_nohaplotig	CDS	50450905	50451957	.	-	0	Parent=ORF1582.mrna1
Chr2	gffcl	locus	50604600	50604698	.	+	.	ID=RLOC_00017249;geneIDs=comp78217_c0_seq1.path2;transcripts=comp78217_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	50604600	50604698	.	+	.	ID=comp78217_c0_seq1.mrna2;geneID=comp78217_c0_seq1.path2;Name=comp78217_c0_seq1;Dir=indeterminatecoverage=12.1;identity=98.0;matches=97;mismatches=2;indels=0;unknowns=0;Target=comp78217_c0_seq1 819 721 .;CDS_Target=comp78217_c0_seq1 818 721 .;locus=RLOC_00017249
Chr2	stalkie_big_nohaplotig	exon	50604600	50604698	97	+	.	Parent=comp78217_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	50604600	50604697	.	+	1	Parent=comp78217_c0_seq1.mrna2
Chr2	gffcl	locus	50685735	50686901	.	+	.	ID=RLOC_00017250;geneIDs=comp835607_c0_seq1.path1;transcripts=comp835607_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50685735	50686901	.	+	.	ID=comp835607_c0_seq1.mrna1;geneID=comp835607_c0_seq1.path1;Name=comp835607_c0_seq1;Dir=indeterminatecoverage=93.0;identity=75.0;matches=264;mismatches=44;indels=44;unknowns=0;locus=RLOC_00017250
Chr2	stalkie_big_nohaplotig	exon	50685735	50685797	96	+	.	Parent=comp835607_c0_seq1.mrna1;Target=comp835607_c0_seq1 63 1 .
Chr2	stalkie_big_nohaplotig	exon	50686188	50686273	50	+	.	Parent=comp835607_c0_seq1.mrna1;Target=comp835607_c0_seq1 144 64 .
Chr2	stalkie_big_nohaplotig	exon	50686732	50686901	79	+	.	Parent=comp835607_c0_seq1.mrna1;Target=comp835607_c0_seq1 371 175 .
Chr2	stalkie_big_nohaplotig	CDS	50685736	50685797	.	+	0	Parent=comp835607_c0_seq1.mrna1;Target=comp835607_c0_seq1 63 2 .
Chr2	stalkie_big_nohaplotig	CDS	50686188	50686209	.	+	1	Parent=comp835607_c0_seq1.mrna1;Target=comp835607_c0_seq1 85 64 .
Chr2	gffcl	locus	50689331	50690461	.	-	.	ID=RLOC_00017251;geneIDs=comp151108_c0_seq1.path1;transcripts=comp151108_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50689331	50690461	.	-	.	ID=comp151108_c0_seq1.mrna1;geneID=comp151108_c0_seq1.path1;Name=comp151108_c0_seq1;Dir=sensecoverage=99.5;identity=97.8;matches=1045;mismatches=11;indels=13;unknowns=0;locus=RLOC_00017251
Chr2	stalkie_big_nohaplotig	exon	50689331	50689886	97	-	.	Parent=comp151108_c0_seq1.mrna1;Target=comp151108_c0_seq1 516 1063 +
Chr2	stalkie_big_nohaplotig	exon	50689951	50690461	97	-	.	Parent=comp151108_c0_seq1.mrna1;Target=comp151108_c0_seq1 6 515 +
Chr2	stalkie_big_nohaplotig	CDS	50689513	50689886	.	-	2	Parent=comp151108_c0_seq1.mrna1;Target=comp151108_c0_seq1 516 889 +
Chr2	stalkie_big_nohaplotig	CDS	50689951	50690272	.	-	0	Parent=comp151108_c0_seq1.mrna1;Target=comp151108_c0_seq1 194 515 +
Chr2	gffcl	locus	50735634	50736457	.	-	.	ID=RLOC_00017252;geneIDs=comp118450_c0_seq1.path1;transcripts=comp118450_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50735634	50736457	.	-	.	ID=comp118450_c0_seq1.mrna1;geneID=comp118450_c0_seq1.path1;Name=comp118450_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=759;mismatches=0;indels=0;unknowns=0;Target=comp118450_c0_seq1 29 94 +;locus=RLOC_00017252
Chr2	stalkie_big_nohaplotig	exon	50735634	50735886	100	-	.	Parent=comp118450_c0_seq1.mrna1;Target=comp118450_c0_seq1 507 759 +
Chr2	stalkie_big_nohaplotig	exon	50735952	50736457	100	-	.	Parent=comp118450_c0_seq1.mrna1;Target=comp118450_c0_seq1 1 506 +
Chr2	stalkie_big_nohaplotig	CDS	50736364	50736429	.	-	0	Parent=comp118450_c0_seq1.mrna1
Chr2	gffcl	locus	50757389	50757793	.	-	.	ID=RLOC_00017253;geneIDs=comp149587_c0_seq1.path1;transcripts=comp149587_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50757389	50757793	.	-	.	ID=comp149587_c0_seq1.mrna1;geneID=comp149587_c0_seq1.path1;Name=comp149587_c0_seq1;Dir=indeterminatecoverage=90.5;identity=98.1;matches=404;mismatches=0;indels=8;unknowns=0;Target=comp149587_c0_seq1 454 44 .;CDS_Target=comp149587_c0_seq1 182 45 .;locus=RLOC_00017253
Chr2	stalkie_big_nohaplotig	exon	50757389	50757793	98	-	.	Parent=comp149587_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	50757661	50757792	.	-	0	Parent=comp149587_c0_seq1.mrna1
Chr2	gffcl	locus	50759218	50761243	.	+	.	ID=RLOC_00017254;geneIDs=comp160437_c0_seq1.path1;transcripts=comp160437_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50759218	50761243	.	+	.	ID=comp160437_c0_seq1.mrna1;geneID=comp160437_c0_seq1.path1;Name=comp160437_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.5;matches=1393;mismatches=52;indels=94;unknowns=0;Target=comp160437_c0_seq1 1266 1255 .;locus=RLOC_00017254
Chr2	stalkie_big_nohaplotig	exon	50759218	50760129	95	+	.	Parent=comp160437_c0_seq1.mrna1;Target=comp160437_c0_seq1 908 1 .
Chr2	stalkie_big_nohaplotig	exon	50760649	50761243	82	+	.	Parent=comp160437_c0_seq1.mrna1;Target=comp160437_c0_seq1 1477 909 .
Chr2	stalkie_big_nohaplotig	CDS	50761021	50761032	.	+	0	Parent=comp160437_c0_seq1.mrna1
Chr2	gffcl	locus	50762170	50762887	.	+	.	ID=RLOC_00017255;geneIDs=comp154895_c1_seq1.path1;transcripts=comp154895_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50762170	50762887	.	+	.	ID=comp154895_c1_seq1.mrna1;geneID=comp154895_c1_seq1.path1;Name=comp154895_c1_seq1;Dir=indeterminatecoverage=93.6;identity=97.9;matches=705;mismatches=8;indels=7;unknowns=0;Target=comp154895_c1_seq1 764 50 .;CDS_Target=comp154895_c1_seq1 104 51 .;locus=RLOC_00017255
Chr2	stalkie_big_nohaplotig	exon	50762170	50762887	97	+	.	Parent=comp154895_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	50762171	50762229	.	+	0	Parent=comp154895_c1_seq1.mrna1
Chr2	gffcl	locus	50765003	50776924	.	-	.	ID=RLOC_00017256;geneIDs=FBgn0026370.1.path2;transcripts=FBgn0026370.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	50765003	50776924	.	-	.	ID=FBgn0026370.1.mrna2;geneID=FBgn0026370.1.path2;Name=FBgn0026370.1;Dir=sensecoverage=89.5;identity=99.0;matches=2049;mismatches=3;indels=18;unknowns=0;locus=RLOC_00017256
Chr2	stalkie_big_nohaplotig	exon	50765003	50765859	99	-	.	Parent=FBgn0026370.1.mrna2;Target=FBgn0026370.1 1436 2292 +
Chr2	stalkie_big_nohaplotig	exon	50767438	50768460	99	-	.	Parent=FBgn0026370.1.mrna2;Target=FBgn0026370.1 413 1435 +
Chr2	stalkie_big_nohaplotig	exon	50776735	50776924	90	-	.	Parent=FBgn0026370.1.mrna2;Target=FBgn0026370.1 241 412 +
Chr2	stalkie_big_nohaplotig	CDS	50765003	50765859	.	-	2	Parent=FBgn0026370.1.mrna2;Target=FBgn0026370.1 1436 2292 +
Chr2	stalkie_big_nohaplotig	CDS	50767438	50768460	.	-	2	Parent=FBgn0026370.1.mrna2;Target=FBgn0026370.1 413 1435 +
Chr2	stalkie_big_nohaplotig	CDS	50776735	50776924	.	-	0	Parent=FBgn0026370.1.mrna2;Target=FBgn0026370.1 241 412 +
Chr2	gffcl	locus	50772443	50815019	.	-	.	ID=RLOC_00017257;geneIDs=FBgn0033257.1.path1,comp159274_c0_seq1.path1;transcripts=FBgn0033257.1.mrna1,comp159274_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50772443	50815019	.	-	.	ID=FBgn0033257.1.mrna1;geneID=FBgn0033257.1.path1;Name=FBgn0033257.1;Dir=sensecoverage=85.9;identity=99.4;matches=875;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017257
Chr2	stalkie_big_nohaplotig	exon	50772443	50772448	100	-	.	Parent=FBgn0033257.1.mrna1;Target=FBgn0033257.1 906 911 +
Chr2	stalkie_big_nohaplotig	exon	50779951	50779952	100	-	.	Parent=FBgn0033257.1.mrna1;Target=FBgn0033257.1 904 905 +
Chr2	stalkie_big_nohaplotig	exon	50803538	50803539	100	-	.	Parent=FBgn0033257.1.mrna1;Target=FBgn0033257.1 902 903 +
Chr2	stalkie_big_nohaplotig	exon	50809255	50809256	100	-	.	Parent=FBgn0033257.1.mrna1;Target=FBgn0033257.1 900 901 +
Chr2	stalkie_big_nohaplotig	exon	50813281	50813465	100	-	.	Parent=FBgn0033257.1.mrna1;Target=FBgn0033257.1 682 866 +
Chr2	stalkie_big_nohaplotig	exon	50814105	50814331	99	-	.	Parent=FBgn0033257.1.mrna1;Target=FBgn0033257.1 455 681 +
Chr2	stalkie_big_nohaplotig	exon	50814424	50814551	98	-	.	Parent=FBgn0033257.1.mrna1;Target=FBgn0033257.1 327 454 +
Chr2	stalkie_big_nohaplotig	exon	50814618	50814783	99	-	.	Parent=FBgn0033257.1.mrna1;Target=FBgn0033257.1 161 326 +
Chr2	stalkie_big_nohaplotig	exon	50814860	50815019	100	-	.	Parent=FBgn0033257.1.mrna1;Target=FBgn0033257.1 1 160 +
Chr2	stalkie_big_nohaplotig	CDS	50772443	50772448	.	-	1	Parent=FBgn0033257.1.mrna1;Target=FBgn0033257.1 906 911 +
Chr2	stalkie_big_nohaplotig	CDS	50779951	50779952	.	-	0	Parent=FBgn0033257.1.mrna1;Target=FBgn0033257.1 904 905 +
Chr2	stalkie_big_nohaplotig	CDS	50803538	50803539	.	-	2	Parent=FBgn0033257.1.mrna1;Target=FBgn0033257.1 902 903 +
Chr2	stalkie_big_nohaplotig	CDS	50809255	50809256	.	-	1	Parent=FBgn0033257.1.mrna1;Target=FBgn0033257.1 900 901 +
Chr2	stalkie_big_nohaplotig	CDS	50813281	50813465	.	-	0	Parent=FBgn0033257.1.mrna1;Target=FBgn0033257.1 682 866 +
Chr2	stalkie_big_nohaplotig	CDS	50814105	50814331	.	-	2	Parent=FBgn0033257.1.mrna1;Target=FBgn0033257.1 455 681 +
Chr2	stalkie_big_nohaplotig	CDS	50814424	50814551	.	-	1	Parent=FBgn0033257.1.mrna1;Target=FBgn0033257.1 327 454 +
Chr2	stalkie_big_nohaplotig	CDS	50814618	50814783	.	-	2	Parent=FBgn0033257.1.mrna1;Target=FBgn0033257.1 161 326 +
Chr2	stalkie_big_nohaplotig	CDS	50814860	50815019	.	-	0	Parent=FBgn0033257.1.mrna1;Target=FBgn0033257.1 1 160 +
Chr2	stalkie_big_nohaplotig	mRNA	50807647	50809582	.	-	.	ID=comp159274_c0_seq1.mrna1;geneID=comp159274_c0_seq1.path1;Name=comp159274_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1919;mismatches=17;indels=1;unknowns=0;Target=comp159274_c0_seq1 1937 1 .;CDS_Target=comp159274_c0_seq1 1230 1021 .;locus=RLOC_00017257
Chr2	stalkie_big_nohaplotig	exon	50807647	50809582	99	-	.	Parent=comp159274_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	50808353	50808562	.	-	0	Parent=comp159274_c0_seq1.mrna1
Chr2	gffcl	locus	50780738	50790421	.	+	.	ID=RLOC_00017258;geneIDs=FBgn0000996.1.path1;transcripts=FBgn0000996.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50780738	50790421	.	+	.	ID=FBgn0000996.1.mrna1;geneID=FBgn0000996.1.path1;Name=FBgn0000996.1;Dir=sensecoverage=100.0;identity=99.2;matches=2220;mismatches=18;indels=0;unknowns=0;locus=RLOC_00017258
Chr2	stalkie_big_nohaplotig	exon	50780738	50780827	100	+	.	Parent=FBgn0000996.1.mrna1;Target=FBgn0000996.1 1 90 +
Chr2	stalkie_big_nohaplotig	exon	50784640	50785337	99	+	.	Parent=FBgn0000996.1.mrna1;Target=FBgn0000996.1 91 788 +
Chr2	stalkie_big_nohaplotig	exon	50788972	50790421	99	+	.	Parent=FBgn0000996.1.mrna1;Target=FBgn0000996.1 789 2238 +
Chr2	stalkie_big_nohaplotig	CDS	50780738	50780827	.	+	0	Parent=FBgn0000996.1.mrna1;Target=FBgn0000996.1 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	50784640	50785337	.	+	0	Parent=FBgn0000996.1.mrna1;Target=FBgn0000996.1 91 788 +
Chr2	stalkie_big_nohaplotig	CDS	50788972	50790421	.	+	1	Parent=FBgn0000996.1.mrna1;Target=FBgn0000996.1 789 2238 +
Chr2	gffcl	locus	50793686	50804261	.	+	.	ID=RLOC_00017259;geneIDs=FBgn0011660.1.path1;transcripts=FBgn0011660.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50793686	50804261	.	+	.	ID=FBgn0011660.1.mrna1;geneID=FBgn0011660.1.path1;Name=FBgn0011660.1;Dir=sensecoverage=100.0;identity=99.0;matches=2568;mismatches=27;indels=0;unknowns=0;locus=RLOC_00017259
Chr2	stalkie_big_nohaplotig	exon	50793686	50793965	98	+	.	Parent=FBgn0011660.1.mrna1;Target=FBgn0011660.1 1 280 +
Chr2	stalkie_big_nohaplotig	exon	50794042	50794185	97	+	.	Parent=FBgn0011660.1.mrna1;Target=FBgn0011660.1 281 424 +
Chr2	stalkie_big_nohaplotig	exon	50795424	50795983	99	+	.	Parent=FBgn0011660.1.mrna1;Target=FBgn0011660.1 425 984 +
Chr2	stalkie_big_nohaplotig	exon	50796042	50796621	98	+	.	Parent=FBgn0011660.1.mrna1;Target=FBgn0011660.1 985 1564 +
Chr2	stalkie_big_nohaplotig	exon	50797668	50798360	98	+	.	Parent=FBgn0011660.1.mrna1;Target=FBgn0011660.1 1565 2257 +
Chr2	stalkie_big_nohaplotig	exon	50799948	50800198	99	+	.	Parent=FBgn0011660.1.mrna1;Target=FBgn0011660.1 2258 2508 +
Chr2	stalkie_big_nohaplotig	exon	50804175	50804261	100	+	.	Parent=FBgn0011660.1.mrna1;Target=FBgn0011660.1 2509 2595 +
Chr2	stalkie_big_nohaplotig	CDS	50793686	50793965	.	+	0	Parent=FBgn0011660.1.mrna1;Target=FBgn0011660.1 1 280 +
Chr2	stalkie_big_nohaplotig	CDS	50794042	50794185	.	+	2	Parent=FBgn0011660.1.mrna1;Target=FBgn0011660.1 281 424 +
Chr2	stalkie_big_nohaplotig	CDS	50795424	50795983	.	+	2	Parent=FBgn0011660.1.mrna1;Target=FBgn0011660.1 425 984 +
Chr2	stalkie_big_nohaplotig	CDS	50796042	50796621	.	+	0	Parent=FBgn0011660.1.mrna1;Target=FBgn0011660.1 985 1564 +
Chr2	stalkie_big_nohaplotig	CDS	50797668	50798360	.	+	2	Parent=FBgn0011660.1.mrna1;Target=FBgn0011660.1 1565 2257 +
Chr2	stalkie_big_nohaplotig	CDS	50799948	50800198	.	+	2	Parent=FBgn0011660.1.mrna1;Target=FBgn0011660.1 2258 2508 +
Chr2	stalkie_big_nohaplotig	CDS	50804175	50804261	.	+	0	Parent=FBgn0011660.1.mrna1;Target=FBgn0011660.1 2509 2595 +
Chr2	gffcl	locus	50801613	50803831	.	-	.	ID=RLOC_00017260;geneIDs=FBgn0028563.2.path1;transcripts=FBgn0028563.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50801613	50803831	.	-	.	ID=FBgn0028563.2.mrna1;geneID=FBgn0028563.2.path1;Name=FBgn0028563.2;Dir=sensecoverage=100.0;identity=99.2;matches=1482;mismatches=12;indels=0;unknowns=0;locus=RLOC_00017260
Chr2	stalkie_big_nohaplotig	exon	50801613	50801863	98	-	.	Parent=FBgn0028563.2.mrna1;Target=FBgn0028563.2 1244 1494 +
Chr2	stalkie_big_nohaplotig	exon	50801930	50802032	100	-	.	Parent=FBgn0028563.2.mrna1;Target=FBgn0028563.2 1141 1243 +
Chr2	stalkie_big_nohaplotig	exon	50802432	50802644	99	-	.	Parent=FBgn0028563.2.mrna1;Target=FBgn0028563.2 928 1140 +
Chr2	stalkie_big_nohaplotig	exon	50802706	50803300	99	-	.	Parent=FBgn0028563.2.mrna1;Target=FBgn0028563.2 333 927 +
Chr2	stalkie_big_nohaplotig	exon	50803362	50803522	99	-	.	Parent=FBgn0028563.2.mrna1;Target=FBgn0028563.2 172 332 +
Chr2	stalkie_big_nohaplotig	exon	50803587	50803700	98	-	.	Parent=FBgn0028563.2.mrna1;Target=FBgn0028563.2 58 171 +
Chr2	stalkie_big_nohaplotig	exon	50803775	50803831	100	-	.	Parent=FBgn0028563.2.mrna1;Target=FBgn0028563.2 1 57 +
Chr2	stalkie_big_nohaplotig	CDS	50801613	50801863	.	-	2	Parent=FBgn0028563.2.mrna1;Target=FBgn0028563.2 1244 1494 +
Chr2	stalkie_big_nohaplotig	CDS	50801930	50802032	.	-	0	Parent=FBgn0028563.2.mrna1;Target=FBgn0028563.2 1141 1243 +
Chr2	stalkie_big_nohaplotig	CDS	50802432	50802644	.	-	0	Parent=FBgn0028563.2.mrna1;Target=FBgn0028563.2 928 1140 +
Chr2	stalkie_big_nohaplotig	CDS	50802706	50803300	.	-	1	Parent=FBgn0028563.2.mrna1;Target=FBgn0028563.2 333 927 +
Chr2	stalkie_big_nohaplotig	CDS	50803362	50803522	.	-	0	Parent=FBgn0028563.2.mrna1;Target=FBgn0028563.2 172 332 +
Chr2	stalkie_big_nohaplotig	CDS	50803587	50803700	.	-	0	Parent=FBgn0028563.2.mrna1;Target=FBgn0028563.2 58 171 +
Chr2	stalkie_big_nohaplotig	CDS	50803775	50803831	.	-	0	Parent=FBgn0028563.2.mrna1;Target=FBgn0028563.2 1 57 +
Chr2	gffcl	locus	50804491	50805923	.	-	.	ID=RLOC_00017261;geneIDs=FBgn0022288.1.path1;transcripts=FBgn0022288.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50804491	50805923	.	-	.	ID=FBgn0022288.1.mrna1;geneID=FBgn0022288.1.path1;Name=FBgn0022288.1;Dir=sensecoverage=100.0;identity=99.7;matches=1370;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017261
Chr2	stalkie_big_nohaplotig	exon	50804491	50805127	99	-	.	Parent=FBgn0022288.1.mrna1;Target=FBgn0022288.1 738 1374 +
Chr2	stalkie_big_nohaplotig	exon	50805187	50805923	99	-	.	Parent=FBgn0022288.1.mrna1;Target=FBgn0022288.1 1 737 +
Chr2	stalkie_big_nohaplotig	CDS	50804491	50805127	.	-	1	Parent=FBgn0022288.1.mrna1;Target=FBgn0022288.1 738 1374 +
Chr2	stalkie_big_nohaplotig	CDS	50805187	50805923	.	-	0	Parent=FBgn0022288.1.mrna1;Target=FBgn0022288.1 1 737 +
Chr2	gffcl	locus	50859471	50862148	.	-	.	ID=RLOC_00017262;geneIDs=FBgn0028562.1.path1;transcripts=FBgn0028562.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50859471	50862148	.	-	.	ID=FBgn0028562.1.mrna1;geneID=FBgn0028562.1.path1;Name=FBgn0028562.1;Dir=sensecoverage=100.0;identity=98.7;matches=1208;mismatches=15;indels=1;unknowns=0;Target=FBgn0028562.1 3 44 +;locus=RLOC_00017262
Chr2	stalkie_big_nohaplotig	exon	50859471	50859721	98	-	.	Parent=FBgn0028562.1.mrna1;Target=FBgn0028562.1 974 1224 +
Chr2	stalkie_big_nohaplotig	exon	50859788	50859890	98	-	.	Parent=FBgn0028562.1.mrna1;Target=FBgn0028562.1 871 973 +
Chr2	stalkie_big_nohaplotig	exon	50859948	50860160	99	-	.	Parent=FBgn0028562.1.mrna1;Target=FBgn0028562.1 658 870 +
Chr2	stalkie_big_nohaplotig	exon	50860261	50860861	99	-	.	Parent=FBgn0028562.1.mrna1;Target=FBgn0028562.1 57 657 +
Chr2	stalkie_big_nohaplotig	exon	50862094	50862148	98	-	.	Parent=FBgn0028562.1.mrna1;Target=FBgn0028562.1 1 56 +
Chr2	stalkie_big_nohaplotig	CDS	50862106	50862146	.	-	0	Parent=FBgn0028562.1.mrna1
Chr2	gffcl	locus	50875821	50894470	.	-	.	ID=RLOC_00017263;geneIDs=FBgn0028563.1.path1,comp160749_c0_seq1.path1;transcripts=comp160749_c0_seq1.mrna1,FBgn0028563.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50875821	50883819	.	-	.	ID=comp160749_c0_seq1.mrna1;geneID=comp160749_c0_seq1.path1;Name=comp160749_c0_seq1;Dir=sensecoverage=99.3;identity=96.7;matches=860;mismatches=28;indels=1;unknowns=0;locus=RLOC_00017263
Chr2	stalkie_big_nohaplotig	exon	50875821	50876382	95	-	.	Parent=comp160749_c0_seq1.mrna1;Target=comp160749_c0_seq1 328 888 +
Chr2	stalkie_big_nohaplotig	exon	50876447	50876749	98	-	.	Parent=comp160749_c0_seq1.mrna1;Target=comp160749_c0_seq1 25 327 +
Chr2	stalkie_big_nohaplotig	exon	50883796	50883819	100	-	.	Parent=comp160749_c0_seq1.mrna1;Target=comp160749_c0_seq1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	50876575	50876749	.	-	1	Parent=comp160749_c0_seq1.mrna1;Target=comp160749_c0_seq1 25 199 +
Chr2	stalkie_big_nohaplotig	CDS	50883796	50883818	.	-	0	Parent=comp160749_c0_seq1.mrna1;Target=comp160749_c0_seq1 2 24 +
Chr2	stalkie_big_nohaplotig	mRNA	50879842	50894470	.	-	.	ID=FBgn0028563.1.mrna1;geneID=FBgn0028563.1.path1;Name=FBgn0028563.1;Dir=sensecoverage=100.0;identity=99.6;matches=1566;mismatches=6;indels=0;unknowns=0;locus=RLOC_00017263
Chr2	stalkie_big_nohaplotig	exon	50879842	50880092	100	-	.	Parent=FBgn0028563.1.mrna1;Target=FBgn0028563.1 1322 1572 +
Chr2	stalkie_big_nohaplotig	exon	50883796	50883898	100	-	.	Parent=FBgn0028563.1.mrna1;Target=FBgn0028563.1 1219 1321 +
Chr2	stalkie_big_nohaplotig	exon	50883964	50884176	99	-	.	Parent=FBgn0028563.1.mrna1;Target=FBgn0028563.1 1006 1218 +
Chr2	stalkie_big_nohaplotig	exon	50884242	50884836	99	-	.	Parent=FBgn0028563.1.mrna1;Target=FBgn0028563.1 411 1005 +
Chr2	stalkie_big_nohaplotig	exon	50888891	50889051	98	-	.	Parent=FBgn0028563.1.mrna1;Target=FBgn0028563.1 250 410 +
Chr2	stalkie_big_nohaplotig	exon	50889109	50889213	100	-	.	Parent=FBgn0028563.1.mrna1;Target=FBgn0028563.1 145 249 +
Chr2	stalkie_big_nohaplotig	exon	50894327	50894470	100	-	.	Parent=FBgn0028563.1.mrna1;Target=FBgn0028563.1 1 144 +
Chr2	stalkie_big_nohaplotig	CDS	50879842	50880092	.	-	2	Parent=FBgn0028563.1.mrna1;Target=FBgn0028563.1 1322 1572 +
Chr2	stalkie_big_nohaplotig	CDS	50883796	50883898	.	-	0	Parent=FBgn0028563.1.mrna1;Target=FBgn0028563.1 1219 1321 +
Chr2	stalkie_big_nohaplotig	CDS	50883964	50884176	.	-	0	Parent=FBgn0028563.1.mrna1;Target=FBgn0028563.1 1006 1218 +
Chr2	stalkie_big_nohaplotig	CDS	50884242	50884836	.	-	1	Parent=FBgn0028563.1.mrna1;Target=FBgn0028563.1 411 1005 +
Chr2	stalkie_big_nohaplotig	CDS	50888891	50889051	.	-	0	Parent=FBgn0028563.1.mrna1;Target=FBgn0028563.1 250 410 +
Chr2	stalkie_big_nohaplotig	CDS	50889109	50889213	.	-	0	Parent=FBgn0028563.1.mrna1;Target=FBgn0028563.1 145 249 +
Chr2	stalkie_big_nohaplotig	CDS	50894327	50894470	.	-	0	Parent=FBgn0028563.1.mrna1;Target=FBgn0028563.1 1 144 +
Chr2	gffcl	locus	50880481	50881091	.	-	.	ID=RLOC_00017264;geneIDs=comp150950_c0_seq1.path1;transcripts=comp150950_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50880481	50881091	.	-	.	ID=comp150950_c0_seq1.mrna1;geneID=comp150950_c0_seq1.path1;Name=comp150950_c0_seq1;Dir=indeterminatecoverage=100.0;identity=87.2;matches=584;mismatches=27;indels=59;unknowns=0;Target=comp150950_c0_seq1 670 1 .;CDS_Target=comp150950_c0_seq1 324 238 .;locus=RLOC_00017264
Chr2	stalkie_big_nohaplotig	exon	50880481	50881091	87	-	.	Parent=comp150950_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	50880768	50880854	.	-	0	Parent=comp150950_c0_seq1.mrna1
Chr2	gffcl	locus	50882526	50882838	.	+	.	ID=RLOC_00017265;geneIDs=comp149772_c0_seq1.path1;transcripts=comp149772_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50882526	50882838	.	+	.	ID=comp149772_c0_seq1.mrna1;geneID=comp149772_c0_seq1.path1;Name=comp149772_c0_seq1;Dir=indeterminatecoverage=78.3;identity=86.8;matches=295;mismatches=8;indels=37;unknowns=0;Target=comp149772_c0_seq1 129 1 .;locus=RLOC_00017265
Chr2	stalkie_big_nohaplotig	exon	50882526	50882686	80	+	.	Parent=comp149772_c0_seq1.mrna1;Target=comp149772_c0_seq1 197 1 .
Chr2	stalkie_big_nohaplotig	exon	50882696	50882838	95	+	.	Parent=comp149772_c0_seq1.mrna1;Target=comp149772_c0_seq1 339 198 .
Chr2	stalkie_big_nohaplotig	CDS	50882526	50882654	.	+	0	Parent=comp149772_c0_seq1.mrna1
Chr2	gffcl	locus	50897545	50898549	.	+	.	ID=RLOC_00017266;geneIDs=FBgn0025469.1.path1;transcripts=FBgn0025469.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50897545	50898549	.	+	.	ID=FBgn0025469.1.mrna1;geneID=FBgn0025469.1.path1;Name=FBgn0025469.1;Dir=sensecoverage=99.9;identity=99.0;matches=682;mismatches=7;indels=0;unknowns=0;locus=RLOC_00017266
Chr2	stalkie_big_nohaplotig	exon	50897545	50897635	98	+	.	Parent=FBgn0025469.1.mrna1;Target=FBgn0025469.1 2 92 +
Chr2	stalkie_big_nohaplotig	exon	50897696	50897773	100	+	.	Parent=FBgn0025469.1.mrna1;Target=FBgn0025469.1 93 170 +
Chr2	stalkie_big_nohaplotig	exon	50897864	50898090	99	+	.	Parent=FBgn0025469.1.mrna1;Target=FBgn0025469.1 171 397 +
Chr2	stalkie_big_nohaplotig	exon	50898148	50898323	98	+	.	Parent=FBgn0025469.1.mrna1;Target=FBgn0025469.1 398 573 +
Chr2	stalkie_big_nohaplotig	exon	50898433	50898549	98	+	.	Parent=FBgn0025469.1.mrna1;Target=FBgn0025469.1 574 690 +
Chr2	stalkie_big_nohaplotig	CDS	50897559	50897635	.	+	0	Parent=FBgn0025469.1.mrna1;Target=FBgn0025469.1 16 92 +
Chr2	stalkie_big_nohaplotig	CDS	50897696	50897773	.	+	1	Parent=FBgn0025469.1.mrna1;Target=FBgn0025469.1 93 170 +
Chr2	stalkie_big_nohaplotig	CDS	50897864	50898090	.	+	1	Parent=FBgn0025469.1.mrna1;Target=FBgn0025469.1 171 397 +
Chr2	stalkie_big_nohaplotig	CDS	50898148	50898323	.	+	2	Parent=FBgn0025469.1.mrna1;Target=FBgn0025469.1 398 573 +
Chr2	stalkie_big_nohaplotig	CDS	50898433	50898549	.	+	0	Parent=FBgn0025469.1.mrna1;Target=FBgn0025469.1 574 690 +
Chr2	gffcl	locus	50904787	50905232	.	+	.	ID=RLOC_00017267;geneIDs=comp117097_c0_seq1.path1;transcripts=comp117097_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50904787	50905232	.	+	.	ID=comp117097_c0_seq1.mrna1;geneID=comp117097_c0_seq1.path1;Name=comp117097_c0_seq1;Dir=indeterminatecoverage=95.3;identity=89.0;matches=414;mismatches=32;indels=19;unknowns=0;Target=comp117097_c0_seq1 488 24 .;CDS_Target=comp117097_c0_seq1 116 24 .;locus=RLOC_00017267
Chr2	stalkie_big_nohaplotig	exon	50904787	50905232	89	+	.	Parent=comp117097_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	50904787	50904872	.	+	0	Parent=comp117097_c0_seq1.mrna1
Chr2	gffcl	locus	50910310	50910939	.	+	.	ID=RLOC_00017268;geneIDs=FBgn0021814.1.path1;transcripts=FBgn0021814.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50910310	50910939	.	+	.	ID=FBgn0021814.1.mrna1;geneID=FBgn0021814.1.path1;Name=FBgn0021814.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=629;mismatches=1;indels=0;unknowns=0;Target=FBgn0021814.1 630 1 .;locus=RLOC_00017268
Chr2	stalkie_big_nohaplotig	exon	50910310	50910939	99	+	.	Parent=FBgn0021814.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	50910310	50910939	.	+	0	Parent=FBgn0021814.1.mrna1
Chr2	gffcl	locus	50911556	50911754	.	-	.	ID=RLOC_00017269;geneIDs=comp119632_c0_seq1.path1;transcripts=comp119632_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50911556	50911754	.	-	.	ID=comp119632_c0_seq1.mrna1;geneID=comp119632_c0_seq1.path1;Name=comp119632_c0_seq1;Dir=indeterminatecoverage=37.4;identity=93.5;matches=186;mismatches=13;indels=0;unknowns=0;Target=comp119632_c0_seq1 199 1 .;CDS_Target=comp119632_c0_seq1 76 2 .;locus=RLOC_00017269
Chr2	stalkie_big_nohaplotig	exon	50911556	50911754	93	-	.	Parent=comp119632_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	50911679	50911753	.	-	0	Parent=comp119632_c0_seq1.mrna1
Chr2	gffcl	locus	50914487	50916792	.	-	.	ID=RLOC_00017270;geneIDs=comp162882_c0_seq1.path1;transcripts=comp162882_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50914487	50916792	.	-	.	ID=comp162882_c0_seq1.mrna1;geneID=comp162882_c0_seq1.path1;Name=comp162882_c0_seq1;Dir=indeterminatecoverage=99.3;identity=96.1;matches=2097;mismatches=61;indels=24;unknowns=0;Target=comp162882_c0_seq1 1484 1467 .;locus=RLOC_00017270
Chr2	stalkie_big_nohaplotig	exon	50914487	50915082	96	-	.	Parent=comp162882_c0_seq1.mrna1;Target=comp162882_c0_seq1 2182 1582 .
Chr2	stalkie_big_nohaplotig	exon	50915231	50916792	95	-	.	Parent=comp162882_c0_seq1.mrna1;Target=comp162882_c0_seq1 1581 1 .
Chr2	stalkie_big_nohaplotig	CDS	50915328	50915344	.	-	0	Parent=comp162882_c0_seq1.mrna1
Chr2	gffcl	locus	50916832	50917689	.	-	.	ID=RLOC_00017271;geneIDs=comp159793_c0_seq1.path1;transcripts=comp159793_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50916832	50917689	.	-	.	ID=comp159793_c0_seq1.mrna1;geneID=comp159793_c0_seq1.path1;Name=comp159793_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=840;mismatches=18;indels=0;unknowns=0;Target=comp159793_c0_seq1 858 1 .;CDS_Target=comp159793_c0_seq1 156 1 .;locus=RLOC_00017271
Chr2	stalkie_big_nohaplotig	exon	50916832	50917689	97	-	.	Parent=comp159793_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	50917534	50917689	.	-	0	Parent=comp159793_c0_seq1.mrna1
Chr2	gffcl	locus	50918067	50923750	.	-	.	ID=RLOC_00017272;geneIDs=comp155996_c0_seq1.path2;transcripts=comp155996_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	50918067	50923750	.	-	.	ID=comp155996_c0_seq1.mrna2;geneID=comp155996_c0_seq1.path2;Name=comp155996_c0_seq1;Dir=indeterminatecoverage=54.2;identity=96.4;matches=403;mismatches=14;indels=1;unknowns=0;locus=RLOC_00017272
Chr2	stalkie_big_nohaplotig	exon	50918067	50918478	96	-	.	Parent=comp155996_c0_seq1.mrna2;Target=comp155996_c0_seq1 770 358 .
Chr2	stalkie_big_nohaplotig	exon	50923746	50923750	100	-	.	Parent=comp155996_c0_seq1.mrna2;Target=comp155996_c0_seq1 357 353 .
Chr2	gffcl	locus	50918481	50919249	.	+	.	ID=RLOC_00017273;geneIDs=comp144408_c1_seq1.path1;transcripts=comp144408_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50918481	50919249	.	+	.	ID=comp144408_c1_seq1.mrna1;geneID=comp144408_c1_seq1.path1;Name=comp144408_c1_seq1;Dir=indeterminatecoverage=99.9;identity=99.4;matches=765;mismatches=1;indels=4;unknowns=0;Target=comp144408_c1_seq1 768 2 .;CDS_Target=comp144408_c1_seq1 399 307 .;locus=RLOC_00017273
Chr2	stalkie_big_nohaplotig	exon	50918481	50919249	99	+	.	Parent=comp144408_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	50918786	50918880	.	+	0	Parent=comp144408_c1_seq1.mrna1
Chr2	gffcl	locus	50919771	50935488	.	-	.	ID=RLOC_00017274;geneIDs=FBgn0020279.1.path1;transcripts=FBgn0020279.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50919771	50935488	.	-	.	ID=FBgn0020279.1.mrna1;geneID=FBgn0020279.1.path1;Name=FBgn0020279.1;Dir=sensecoverage=35.3;identity=99.6;matches=1341;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017274
Chr2	stalkie_big_nohaplotig	exon	50919771	50919866	100	-	.	Parent=FBgn0020279.1.mrna1;Target=FBgn0020279.1 3715 3810 +
Chr2	stalkie_big_nohaplotig	exon	50923693	50923725	100	-	.	Parent=FBgn0020279.1.mrna1;Target=FBgn0020279.1 3682 3714 +
Chr2	stalkie_big_nohaplotig	exon	50926162	50926317	100	-	.	Parent=FBgn0020279.1.mrna1;Target=FBgn0020279.1 3526 3681 +
Chr2	stalkie_big_nohaplotig	exon	50926402	50926653	99	-	.	Parent=FBgn0020279.1.mrna1;Target=FBgn0020279.1 3274 3525 +
Chr2	stalkie_big_nohaplotig	exon	50927264	50927389	100	-	.	Parent=FBgn0020279.1.mrna1;Target=FBgn0020279.1 3148 3273 +
Chr2	stalkie_big_nohaplotig	exon	50928787	50928921	100	-	.	Parent=FBgn0020279.1.mrna1;Target=FBgn0020279.1 3013 3147 +
Chr2	stalkie_big_nohaplotig	exon	50934751	50935192	99	-	.	Parent=FBgn0020279.1.mrna1;Target=FBgn0020279.1 2571 3012 +
Chr2	stalkie_big_nohaplotig	exon	50935383	50935488	100	-	.	Parent=FBgn0020279.1.mrna1;Target=FBgn0020279.1 2465 2570 +
Chr2	stalkie_big_nohaplotig	CDS	50919771	50919866	.	-	0	Parent=FBgn0020279.1.mrna1;Target=FBgn0020279.1 3715 3810 +
Chr2	stalkie_big_nohaplotig	CDS	50923693	50923725	.	-	0	Parent=FBgn0020279.1.mrna1;Target=FBgn0020279.1 3682 3714 +
Chr2	stalkie_big_nohaplotig	CDS	50926162	50926317	.	-	0	Parent=FBgn0020279.1.mrna1;Target=FBgn0020279.1 3526 3681 +
Chr2	stalkie_big_nohaplotig	CDS	50926402	50926653	.	-	0	Parent=FBgn0020279.1.mrna1;Target=FBgn0020279.1 3274 3525 +
Chr2	stalkie_big_nohaplotig	CDS	50927264	50927389	.	-	0	Parent=FBgn0020279.1.mrna1;Target=FBgn0020279.1 3148 3273 +
Chr2	stalkie_big_nohaplotig	CDS	50928787	50928921	.	-	0	Parent=FBgn0020279.1.mrna1;Target=FBgn0020279.1 3013 3147 +
Chr2	stalkie_big_nohaplotig	CDS	50934751	50935192	.	-	1	Parent=FBgn0020279.1.mrna1;Target=FBgn0020279.1 2571 3012 +
Chr2	stalkie_big_nohaplotig	CDS	50935383	50935486	.	-	0	Parent=FBgn0020279.1.mrna1;Target=FBgn0020279.1 2467 2570 +
Chr2	gffcl	locus	50942373	50944203	.	-	.	ID=RLOC_00017275;geneIDs=FBgn0015039.1.path1;transcripts=FBgn0015039.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50942373	50944203	.	-	.	ID=FBgn0015039.1.mrna1;geneID=FBgn0015039.1.path1;Name=FBgn0015039.1;Dir=sensecoverage=100.0;identity=99.3;matches=1534;mismatches=11;indels=0;unknowns=0;locus=RLOC_00017275
Chr2	stalkie_big_nohaplotig	exon	50942373	50942536	98	-	.	Parent=FBgn0015039.1.mrna1;Target=FBgn0015039.1 1382 1545 +
Chr2	stalkie_big_nohaplotig	exon	50942628	50943264	99	-	.	Parent=FBgn0015039.1.mrna1;Target=FBgn0015039.1 745 1381 +
Chr2	stalkie_big_nohaplotig	exon	50943397	50943895	98	-	.	Parent=FBgn0015039.1.mrna1;Target=FBgn0015039.1 246 744 +
Chr2	stalkie_big_nohaplotig	exon	50943959	50944203	99	-	.	Parent=FBgn0015039.1.mrna1;Target=FBgn0015039.1 1 245 +
Chr2	stalkie_big_nohaplotig	CDS	50942373	50942536	.	-	2	Parent=FBgn0015039.1.mrna1;Target=FBgn0015039.1 1382 1545 +
Chr2	stalkie_big_nohaplotig	CDS	50942628	50943264	.	-	0	Parent=FBgn0015039.1.mrna1;Target=FBgn0015039.1 745 1381 +
Chr2	stalkie_big_nohaplotig	CDS	50943397	50943895	.	-	1	Parent=FBgn0015039.1.mrna1;Target=FBgn0015039.1 246 744 +
Chr2	stalkie_big_nohaplotig	CDS	50943959	50944203	.	-	0	Parent=FBgn0015039.1.mrna1;Target=FBgn0015039.1 1 245 +
Chr2	gffcl	locus	50988668	50989260	.	-	.	ID=RLOC_00017276;geneIDs=comp72045_c0_seq1.path1;transcripts=comp72045_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	50988668	50989260	.	-	.	ID=comp72045_c0_seq1.mrna1;geneID=comp72045_c0_seq1.path1;Name=comp72045_c0_seq1;Dir=indeterminatecoverage=99.8;identity=88.9;matches=528;mismatches=42;indels=24;unknowns=0;Target=comp72045_c0_seq1 571 1 .;CDS_Target=comp72045_c0_seq1 218 198 .;locus=RLOC_00017276
Chr2	stalkie_big_nohaplotig	exon	50988668	50989260	88	-	.	Parent=comp72045_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	50989035	50989055	.	-	0	Parent=comp72045_c0_seq1.mrna1
Chr2	gffcl	locus	51034880	51037993	.	+	.	ID=RLOC_00017277;geneIDs=FBgn0034982.1.path1;transcripts=FBgn0034982.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51034880	51037993	.	+	.	ID=FBgn0034982.1.mrna1;geneID=FBgn0034982.1.path1;Name=FBgn0034982.1;Dir=sensecoverage=99.5;identity=99.4;matches=2313;mismatches=12;indels=2;unknowns=0;locus=RLOC_00017277
Chr2	stalkie_big_nohaplotig	exon	51034880	51035285	100	+	.	Parent=FBgn0034982.1.mrna1;Target=FBgn0034982.1 12 417 +
Chr2	stalkie_big_nohaplotig	exon	51035351	51035921	99	+	.	Parent=FBgn0034982.1.mrna1;Target=FBgn0034982.1 418 988 +
Chr2	stalkie_big_nohaplotig	exon	51035984	51036165	98	+	.	Parent=FBgn0034982.1.mrna1;Target=FBgn0034982.1 989 1170 +
Chr2	stalkie_big_nohaplotig	exon	51036267	51036811	99	+	.	Parent=FBgn0034982.1.mrna1;Target=FBgn0034982.1 1171 1715 +
Chr2	stalkie_big_nohaplotig	exon	51036873	51037356	99	+	.	Parent=FBgn0034982.1.mrna1;Target=FBgn0034982.1 1716 2199 +
Chr2	stalkie_big_nohaplotig	exon	51037856	51037993	99	+	.	Parent=FBgn0034982.1.mrna1;Target=FBgn0034982.1 2200 2337 +
Chr2	stalkie_big_nohaplotig	CDS	51034881	51035285	.	+	0	Parent=FBgn0034982.1.mrna1;Target=FBgn0034982.1 13 417 +
Chr2	stalkie_big_nohaplotig	CDS	51035351	51035921	.	+	0	Parent=FBgn0034982.1.mrna1;Target=FBgn0034982.1 418 988 +
Chr2	stalkie_big_nohaplotig	CDS	51035984	51036165	.	+	2	Parent=FBgn0034982.1.mrna1;Target=FBgn0034982.1 989 1170 +
Chr2	stalkie_big_nohaplotig	CDS	51036267	51036811	.	+	0	Parent=FBgn0034982.1.mrna1;Target=FBgn0034982.1 1171 1715 +
Chr2	stalkie_big_nohaplotig	CDS	51036873	51037356	.	+	1	Parent=FBgn0034982.1.mrna1;Target=FBgn0034982.1 1716 2199 +
Chr2	stalkie_big_nohaplotig	CDS	51037856	51037993	.	+	0	Parent=FBgn0034982.1.mrna1;Target=FBgn0034982.1 2200 2337 +
Chr2	gffcl	locus	51038963	51042401	.	-	.	ID=RLOC_00017278;geneIDs=FBgn0021875.1.path1;transcripts=FBgn0021875.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51038963	51042401	.	-	.	ID=FBgn0021875.1.mrna1;geneID=FBgn0021875.1.path1;Name=FBgn0021875.1;Dir=sensecoverage=100.0;identity=99.5;matches=1098;mismatches=6;indels=0;unknowns=0;locus=RLOC_00017278
Chr2	stalkie_big_nohaplotig	exon	51038963	51039691	99	-	.	Parent=FBgn0021875.1.mrna1;Target=FBgn0021875.1 376 1104 +
Chr2	stalkie_big_nohaplotig	exon	51041911	51041995	100	-	.	Parent=FBgn0021875.1.mrna1;Target=FBgn0021875.1 291 375 +
Chr2	stalkie_big_nohaplotig	exon	51042054	51042148	100	-	.	Parent=FBgn0021875.1.mrna1;Target=FBgn0021875.1 196 290 +
Chr2	stalkie_big_nohaplotig	exon	51042207	51042401	98	-	.	Parent=FBgn0021875.1.mrna1;Target=FBgn0021875.1 1 195 +
Chr2	stalkie_big_nohaplotig	CDS	51038963	51039691	.	-	0	Parent=FBgn0021875.1.mrna1;Target=FBgn0021875.1 376 1104 +
Chr2	stalkie_big_nohaplotig	CDS	51041911	51041995	.	-	1	Parent=FBgn0021875.1.mrna1;Target=FBgn0021875.1 291 375 +
Chr2	stalkie_big_nohaplotig	CDS	51042054	51042148	.	-	0	Parent=FBgn0021875.1.mrna1;Target=FBgn0021875.1 196 290 +
Chr2	stalkie_big_nohaplotig	CDS	51042207	51042401	.	-	0	Parent=FBgn0021875.1.mrna1;Target=FBgn0021875.1 1 195 +
Chr2	gffcl	locus	51074128	51079410	.	+	.	ID=RLOC_00017279;geneIDs=FBgn0041582.1.path1;transcripts=FBgn0041582.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51074128	51079410	.	+	.	ID=FBgn0041582.1.mrna1;geneID=FBgn0041582.1.path1;Name=FBgn0041582.1;Dir=sensecoverage=100.0;identity=99.4;matches=2499;mismatches=14;indels=1;unknowns=0;locus=RLOC_00017279
Chr2	stalkie_big_nohaplotig	exon	51074128	51074196	98	+	.	Parent=FBgn0041582.1.mrna1;Target=FBgn0041582.1 1 70 +
Chr2	stalkie_big_nohaplotig	exon	51074262	51074458	98	+	.	Parent=FBgn0041582.1.mrna1;Target=FBgn0041582.1 71 267 +
Chr2	stalkie_big_nohaplotig	exon	51074520	51074787	99	+	.	Parent=FBgn0041582.1.mrna1;Target=FBgn0041582.1 268 535 +
Chr2	stalkie_big_nohaplotig	exon	51076575	51076655	98	+	.	Parent=FBgn0041582.1.mrna1;Target=FBgn0041582.1 536 616 +
Chr2	stalkie_big_nohaplotig	exon	51076724	51077781	99	+	.	Parent=FBgn0041582.1.mrna1;Target=FBgn0041582.1 617 1674 +
Chr2	stalkie_big_nohaplotig	exon	51078571	51079410	99	+	.	Parent=FBgn0041582.1.mrna1;Target=FBgn0041582.1 1675 2514 +
Chr2	stalkie_big_nohaplotig	CDS	51074130	51074196	.	+	0	Parent=FBgn0041582.1.mrna1;Target=FBgn0041582.1 3 70 +
Chr2	stalkie_big_nohaplotig	CDS	51074262	51074283	.	+	2	Parent=FBgn0041582.1.mrna1;Target=FBgn0041582.1 71 92 +
Chr2	gffcl	locus	51085772	51086604	.	-	.	ID=RLOC_00017280;geneIDs=comp155623_c0_seq1.path1;transcripts=comp155623_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51085772	51086604	.	-	.	ID=comp155623_c0_seq1.mrna1;geneID=comp155623_c0_seq1.path1;Name=comp155623_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.5;matches=812;mismatches=19;indels=2;unknowns=0;Target=comp155623_c0_seq1 833 3 .;CDS_Target=comp155623_c0_seq1 288 136 .;locus=RLOC_00017280
Chr2	stalkie_big_nohaplotig	exon	51085772	51086604	97	-	.	Parent=comp155623_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	51086317	51086469	.	-	0	Parent=comp155623_c0_seq1.mrna1
Chr2	gffcl	locus	51088321	51088556	.	+	.	ID=RLOC_00017281;geneIDs=comp155908_c0_seq1.path2;transcripts=comp155908_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	51088321	51088556	.	+	.	ID=comp155908_c0_seq1.mrna2;geneID=comp155908_c0_seq1.path2;Name=comp155908_c0_seq1;Dir=indeterminatecoverage=70.4;identity=99.2;matches=234;mismatches=2;indels=0;unknowns=0;Target=comp155908_c0_seq1 335 100 .;locus=RLOC_00017281
Chr2	stalkie_big_nohaplotig	exon	51088321	51088556	99	+	.	Parent=comp155908_c0_seq1.mrna2
Chr2	gffcl	locus	51089673	51090042	.	-	.	ID=RLOC_00017282;geneIDs=FBgn0034978.path1;transcripts=FBgn0034978.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51089673	51090042	.	-	.	ID=FBgn0034978.mrna1;geneID=FBgn0034978.path1;Name=FBgn0034978;Dir=sensecoverage=100.0;identity=99.6;matches=263;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017282
Chr2	stalkie_big_nohaplotig	exon	51089673	51089762	100	-	.	Parent=FBgn0034978.mrna1;Target=FBgn0034978 175 264 +
Chr2	stalkie_big_nohaplotig	exon	51089869	51090042	99	-	.	Parent=FBgn0034978.mrna1;Target=FBgn0034978 1 174 +
Chr2	stalkie_big_nohaplotig	CDS	51089673	51089762	.	-	0	Parent=FBgn0034978.mrna1;Target=FBgn0034978 175 264 +
Chr2	stalkie_big_nohaplotig	CDS	51089869	51090042	.	-	0	Parent=FBgn0034978.mrna1;Target=FBgn0034978 1 174 +
Chr2	gffcl	locus	51090055	51096277	.	-	.	ID=RLOC_00017283;geneIDs=ORF2584.path1;transcripts=ORF2584.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51090055	51096277	.	-	.	ID=ORF2584.mrna1;geneID=ORF2584.path1;Name=ORF2584;Dir=sensecoverage=98.4;identity=98.9;matches=815;mismatches=9;indels=0;unknowns=0;locus=RLOC_00017283
Chr2	stalkie_big_nohaplotig	exon	51090055	51090200	99	-	.	Parent=ORF2584.mrna1;Target=ORF2584 692 837 +
Chr2	stalkie_big_nohaplotig	exon	51091521	51092031	99	-	.	Parent=ORF2584.mrna1;Target=ORF2584 181 691 +
Chr2	stalkie_big_nohaplotig	exon	51092102	51092211	99	-	.	Parent=ORF2584.mrna1;Target=ORF2584 71 180 +
Chr2	stalkie_big_nohaplotig	exon	51096221	51096277	96	-	.	Parent=ORF2584.mrna1;Target=ORF2584 14 70 +
Chr2	stalkie_big_nohaplotig	CDS	51090055	51090200	.	-	2	Parent=ORF2584.mrna1;Target=ORF2584 692 837 +
Chr2	stalkie_big_nohaplotig	CDS	51091521	51092031	.	-	0	Parent=ORF2584.mrna1;Target=ORF2584 181 691 +
Chr2	stalkie_big_nohaplotig	CDS	51092102	51092211	.	-	2	Parent=ORF2584.mrna1;Target=ORF2584 71 180 +
Chr2	stalkie_big_nohaplotig	CDS	51096221	51096275	.	-	0	Parent=ORF2584.mrna1;Target=ORF2584 16 70 +
Chr2	gffcl	locus	51194958	51213404	.	+	.	ID=RLOC_00017285;geneIDs=FBgn0015038.path1;transcripts=FBgn0015038.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51194958	51213404	.	+	.	ID=FBgn0015038.mrna1;geneID=FBgn0015038.path1;Name=FBgn0015038;Dir=sensecoverage=100.0;identity=98.4;matches=242;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017285
Chr2	stalkie_big_nohaplotig	exon	51194958	51195039	95	+	.	Parent=FBgn0015038.mrna1;Target=FBgn0015038 1 82 +
Chr2	stalkie_big_nohaplotig	exon	51213241	51213404	100	+	.	Parent=FBgn0015038.mrna1;Target=FBgn0015038 83 246 +
Chr2	stalkie_big_nohaplotig	CDS	51194958	51195039	.	+	0	Parent=FBgn0015038.mrna1;Target=FBgn0015038 1 82 +
Chr2	stalkie_big_nohaplotig	CDS	51213241	51213404	.	+	2	Parent=FBgn0015038.mrna1;Target=FBgn0015038 83 246 +
Chr2	gffcl	locus	51221444	51223268	.	+	.	ID=RLOC_00017287;geneIDs=FBgn0015039.1.path2;transcripts=FBgn0015039.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	51221444	51223268	.	+	.	ID=FBgn0015039.1.mrna2;geneID=FBgn0015039.1.path2;Name=FBgn0015039.1;Dir=sensecoverage=100.0;identity=99.1;matches=1531;mismatches=14;indels=0;unknowns=0;locus=RLOC_00017287
Chr2	stalkie_big_nohaplotig	exon	51221444	51221688	99	+	.	Parent=FBgn0015039.1.mrna2;Target=FBgn0015039.1 1 245 +
Chr2	stalkie_big_nohaplotig	exon	51221752	51222250	98	+	.	Parent=FBgn0015039.1.mrna2;Target=FBgn0015039.1 246 744 +
Chr2	stalkie_big_nohaplotig	exon	51222382	51223018	99	+	.	Parent=FBgn0015039.1.mrna2;Target=FBgn0015039.1 745 1381 +
Chr2	stalkie_big_nohaplotig	exon	51223105	51223268	99	+	.	Parent=FBgn0015039.1.mrna2;Target=FBgn0015039.1 1382 1545 +
Chr2	stalkie_big_nohaplotig	CDS	51221444	51221688	.	+	0	Parent=FBgn0015039.1.mrna2;Target=FBgn0015039.1 1 245 +
Chr2	stalkie_big_nohaplotig	CDS	51221752	51222250	.	+	1	Parent=FBgn0015039.1.mrna2;Target=FBgn0015039.1 246 744 +
Chr2	stalkie_big_nohaplotig	CDS	51222382	51223018	.	+	0	Parent=FBgn0015039.1.mrna2;Target=FBgn0015039.1 745 1381 +
Chr2	stalkie_big_nohaplotig	CDS	51223105	51223268	.	+	2	Parent=FBgn0015039.1.mrna2;Target=FBgn0015039.1 1382 1545 +
Chr2	gffcl	locus	51262261	51262613	.	+	.	ID=RLOC_00017289;geneIDs=FBgn0033775.path1;transcripts=FBgn0033775.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51262261	51262613	.	+	.	ID=FBgn0033775.mrna1;geneID=FBgn0033775.path1;Name=FBgn0033775;Dir=indeterminatecoverage=99.7;identity=95.5;matches=337;mismatches=16;indels=0;unknowns=0;Target=FBgn0033775 353 1 .;CDS_Target=FBgn0033775 351 1 .;locus=RLOC_00017289
Chr2	stalkie_big_nohaplotig	exon	51262261	51262613	95	+	.	Parent=FBgn0033775.mrna1
Chr2	stalkie_big_nohaplotig	CDS	51262261	51262611	.	+	0	Parent=FBgn0033775.mrna1
Chr2	gffcl	locus	51263099	51263676	.	+	.	ID=RLOC_00017290;geneIDs=comp163511_c1_seq1.path1;transcripts=comp163511_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51263099	51263676	.	+	.	ID=comp163511_c1_seq1.mrna1;geneID=comp163511_c1_seq1.path1;Name=comp163511_c1_seq1;Dir=sensecoverage=99.4;identity=97.1;matches=501;mismatches=15;indels=0;unknowns=0;locus=RLOC_00017290
Chr2	stalkie_big_nohaplotig	exon	51263099	51263370	97	+	.	Parent=comp163511_c1_seq1.mrna1;Target=comp163511_c1_seq1 1 272 +
Chr2	stalkie_big_nohaplotig	exon	51263433	51263676	96	+	.	Parent=comp163511_c1_seq1.mrna1;Target=comp163511_c1_seq1 273 516 +
Chr2	stalkie_big_nohaplotig	CDS	51263100	51263370	.	+	0	Parent=comp163511_c1_seq1.mrna1;Target=comp163511_c1_seq1 2 272 +
Chr2	stalkie_big_nohaplotig	CDS	51263433	51263602	.	+	2	Parent=comp163511_c1_seq1.mrna1;Target=comp163511_c1_seq1 273 442 +
Chr2	gffcl	locus	51264798	51265561	.	+	.	ID=RLOC_00017291;geneIDs=comp156767_c0_seq1.path1;transcripts=comp156767_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51264798	51265561	.	+	.	ID=comp156767_c0_seq1.mrna1;geneID=comp156767_c0_seq1.path1;Name=comp156767_c0_seq1;Dir=indeterminatecoverage=85.6;identity=91.0;matches=697;mismatches=27;indels=42;unknowns=0;Target=comp156767_c0_seq1 726 1 .;CDS_Target=comp156767_c0_seq1 243 31 .;locus=RLOC_00017291
Chr2	stalkie_big_nohaplotig	exon	51264798	51265561	90	+	.	Parent=comp156767_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	51264828	51265040	.	+	0	Parent=comp156767_c0_seq1.mrna1
Chr2	gffcl	locus	51271796	51278024	.	+	.	ID=RLOC_00017292;geneIDs=FBgn0015040.1.path1;transcripts=FBgn0015040.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51271796	51278024	.	+	.	ID=FBgn0015040.1.mrna1;geneID=FBgn0015040.1.path1;Name=FBgn0015040.1;Dir=sensecoverage=100.0;identity=98.7;matches=1558;mismatches=20;indels=0;unknowns=0;locus=RLOC_00017292
Chr2	stalkie_big_nohaplotig	exon	51271796	51272028	100	+	.	Parent=FBgn0015040.1.mrna1;Target=FBgn0015040.1 1 233 +
Chr2	stalkie_big_nohaplotig	exon	51276552	51277059	99	+	.	Parent=FBgn0015040.1.mrna1;Target=FBgn0015040.1 234 741 +
Chr2	stalkie_big_nohaplotig	exon	51277125	51277791	97	+	.	Parent=FBgn0015040.1.mrna1;Target=FBgn0015040.1 742 1408 +
Chr2	stalkie_big_nohaplotig	exon	51277855	51278024	100	+	.	Parent=FBgn0015040.1.mrna1;Target=FBgn0015040.1 1409 1578 +
Chr2	stalkie_big_nohaplotig	CDS	51271796	51272028	.	+	0	Parent=FBgn0015040.1.mrna1;Target=FBgn0015040.1 1 233 +
Chr2	stalkie_big_nohaplotig	CDS	51276552	51277059	.	+	1	Parent=FBgn0015040.1.mrna1;Target=FBgn0015040.1 234 741 +
Chr2	stalkie_big_nohaplotig	CDS	51277125	51277791	.	+	0	Parent=FBgn0015040.1.mrna1;Target=FBgn0015040.1 742 1408 +
Chr2	stalkie_big_nohaplotig	CDS	51277855	51278024	.	+	2	Parent=FBgn0015040.1.mrna1;Target=FBgn0015040.1 1409 1578 +
Chr2	gffcl	locus	51317567	51318988	.	-	.	ID=RLOC_00017293;geneIDs=FBgn0035043.1.path1;transcripts=FBgn0035043.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51317567	51318988	.	-	.	ID=FBgn0035043.1.mrna1;geneID=FBgn0035043.1.path1;Name=FBgn0035043.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1415;mismatches=7;indels=0;unknowns=0;Target=FBgn0035043.1 1422 1 .;locus=RLOC_00017293
Chr2	stalkie_big_nohaplotig	exon	51317567	51318988	99	-	.	Parent=FBgn0035043.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	51317567	51318988	.	-	0	Parent=FBgn0035043.1.mrna1
Chr2	gffcl	locus	51335475	51335679	.	-	.	ID=RLOC_00017295;geneIDs=comp113804_c0_seq1.path1;transcripts=comp113804_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51335475	51335679	.	-	.	ID=comp113804_c0_seq1.mrna1;geneID=comp113804_c0_seq1.path1;Name=comp113804_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=204;mismatches=1;indels=0;unknowns=0;Target=comp113804_c0_seq1 205 1 .;CDS_Target=comp113804_c0_seq1 203 3 .;locus=RLOC_00017295
Chr2	stalkie_big_nohaplotig	exon	51335475	51335679	99	-	.	Parent=comp113804_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	51335477	51335677	.	-	0	Parent=comp113804_c0_seq1.mrna1
Chr2	gffcl	locus	51337377	51337696	.	-	.	ID=RLOC_00017296;geneIDs=comp147773_c0_seq1.path1;transcripts=comp147773_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51337377	51337696	.	-	.	ID=comp147773_c0_seq1.mrna1;geneID=comp147773_c0_seq1.path1;Name=comp147773_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=261;mismatches=2;indels=1;unknowns=0;Target=comp147773_c0_seq1 128 262 .;locus=RLOC_00017296
Chr2	stalkie_big_nohaplotig	exon	51337377	51337479	99	-	.	Parent=comp147773_c0_seq1.mrna1;Target=comp147773_c0_seq1 1 103 -
Chr2	stalkie_big_nohaplotig	exon	51337537	51337696	98	-	.	Parent=comp147773_c0_seq1.mrna1;Target=comp147773_c0_seq1 104 264 -
Chr2	stalkie_big_nohaplotig	CDS	51337561	51337694	.	-	0	Parent=comp147773_c0_seq1.mrna1
Chr2	gffcl	locus	51402747	51408012	.	-	.	ID=RLOC_00017297;geneIDs=FBgn0027835.1.path1;transcripts=FBgn0027835.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51402747	51408012	.	-	.	ID=FBgn0027835.1.mrna1;geneID=FBgn0027835.1.path1;Name=FBgn0027835.1;Dir=sensecoverage=100.0;identity=99.9;matches=3793;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017297
Chr2	stalkie_big_nohaplotig	exon	51402747	51403106	100	-	.	Parent=FBgn0027835.1.mrna1;Target=FBgn0027835.1 3436 3795 +
Chr2	stalkie_big_nohaplotig	exon	51404361	51405701	99	-	.	Parent=FBgn0027835.1.mrna1;Target=FBgn0027835.1 2095 3435 +
Chr2	stalkie_big_nohaplotig	exon	51405766	51407619	100	-	.	Parent=FBgn0027835.1.mrna1;Target=FBgn0027835.1 241 2094 +
Chr2	stalkie_big_nohaplotig	exon	51407707	51407912	100	-	.	Parent=FBgn0027835.1.mrna1;Target=FBgn0027835.1 35 240 +
Chr2	stalkie_big_nohaplotig	exon	51407979	51408012	100	-	.	Parent=FBgn0027835.1.mrna1;Target=FBgn0027835.1 1 34 +
Chr2	stalkie_big_nohaplotig	CDS	51402747	51403106	.	-	0	Parent=FBgn0027835.1.mrna1;Target=FBgn0027835.1 3436 3795 +
Chr2	stalkie_big_nohaplotig	CDS	51404361	51405701	.	-	0	Parent=FBgn0027835.1.mrna1;Target=FBgn0027835.1 2095 3435 +
Chr2	stalkie_big_nohaplotig	CDS	51405766	51407619	.	-	0	Parent=FBgn0027835.1.mrna1;Target=FBgn0027835.1 241 2094 +
Chr2	stalkie_big_nohaplotig	CDS	51407707	51407912	.	-	2	Parent=FBgn0027835.1.mrna1;Target=FBgn0027835.1 35 240 +
Chr2	stalkie_big_nohaplotig	CDS	51407979	51408012	.	-	0	Parent=FBgn0027835.1.mrna1;Target=FBgn0027835.1 1 34 +
Chr2	gffcl	locus	51404119	52555703	.	+	.	ID=RLOC_00017298;geneIDs=comp152316_c0_seq1.path1,comp153223_c2_seq1.path1;transcripts=comp153223_c2_seq1.mrna1,comp152316_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51404119	52555703	.	+	.	ID=comp153223_c2_seq1.mrna1;geneID=comp153223_c2_seq1.path1;Name=comp153223_c2_seq1;Dir=antisensecoverage=99.2;identity=97.2;matches=3713;mismatches=61;indels=45;unknowns=0;locus=RLOC_00017298
Chr2	stalkie_big_nohaplotig	exon	51404119	51404136	100	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3789 3806 -
Chr2	stalkie_big_nohaplotig	exon	51410076	51410078	100	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3786 3788 -
Chr2	stalkie_big_nohaplotig	exon	51410935	51410944	100	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3776 3785 -
Chr2	stalkie_big_nohaplotig	exon	51419115	51419118	100	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3772 3775 -
Chr2	stalkie_big_nohaplotig	exon	51419412	51419417	100	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3766 3771 -
Chr2	stalkie_big_nohaplotig	exon	51425615	51425624	80	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3758 3765 -
Chr2	stalkie_big_nohaplotig	exon	51428907	51428911	100	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3753 3757 -
Chr2	stalkie_big_nohaplotig	exon	51433627	51433630	100	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3749 3752 -
Chr2	stalkie_big_nohaplotig	exon	51438901	51438960	44	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3697 3748 -
Chr2	stalkie_big_nohaplotig	exon	51445519	51445526	100	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3689 3696 -
Chr2	stalkie_big_nohaplotig	exon	51449430	51449434	100	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3684 3688 -
Chr2	stalkie_big_nohaplotig	exon	51453468	51453476	88	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3675 3683 -
Chr2	stalkie_big_nohaplotig	exon	51455425	51455436	91	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3663 3674 -
Chr2	stalkie_big_nohaplotig	exon	51465197	51465229	43	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3612 3662 -
Chr2	stalkie_big_nohaplotig	exon	51465602	51465606	100	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3607 3611 -
Chr2	stalkie_big_nohaplotig	exon	51473667	51473703	50	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3557 3606 -
Chr2	stalkie_big_nohaplotig	exon	51475716	51475735	60	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3539 3556 -
Chr2	stalkie_big_nohaplotig	exon	51479780	51479784	100	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3534 3538 -
Chr2	stalkie_big_nohaplotig	exon	51482555	51482556	100	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3532 3533 -
Chr2	stalkie_big_nohaplotig	exon	51485456	51485463	75	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3524 3531 -
Chr2	stalkie_big_nohaplotig	exon	51508936	51508937	100	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3522 3523 -
Chr2	stalkie_big_nohaplotig	exon	51520365	51520366	100	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3520 3521 -
Chr2	stalkie_big_nohaplotig	exon	52461508	52461564	100	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 3463 3519 -
Chr2	stalkie_big_nohaplotig	exon	52483459	52484273	99	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 2648 3462 -
Chr2	stalkie_big_nohaplotig	exon	52490604	52490821	100	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 2430 2647 -
Chr2	stalkie_big_nohaplotig	exon	52497345	52497494	100	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 2280 2429 -
Chr2	stalkie_big_nohaplotig	exon	52497722	52498152	99	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 1849 2279 -
Chr2	stalkie_big_nohaplotig	exon	52501806	52502168	100	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 1486 1848 -
Chr2	stalkie_big_nohaplotig	exon	52520197	52520609	100	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 1073 1485 -
Chr2	stalkie_big_nohaplotig	exon	52521346	52521461	100	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 957 1072 -
Chr2	stalkie_big_nohaplotig	exon	52535783	52536046	100	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 693 956 -
Chr2	stalkie_big_nohaplotig	exon	52555012	52555703	100	+	.	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 1 692 -
Chr2	stalkie_big_nohaplotig	CDS	52483912	52484273	.	+	0	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 2648 3009 .
Chr2	stalkie_big_nohaplotig	CDS	52490604	52490821	.	+	1	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 2430 2647 .
Chr2	stalkie_big_nohaplotig	CDS	52497345	52497494	.	+	2	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 2280 2429 .
Chr2	stalkie_big_nohaplotig	CDS	52497722	52498152	.	+	2	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 1849 2279 .
Chr2	stalkie_big_nohaplotig	CDS	52501806	52502168	.	+	0	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 1486 1848 .
Chr2	stalkie_big_nohaplotig	CDS	52520197	52520609	.	+	0	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 1073 1485 .
Chr2	stalkie_big_nohaplotig	CDS	52521346	52521461	.	+	1	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 957 1072 .
Chr2	stalkie_big_nohaplotig	CDS	52535783	52536046	.	+	2	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 693 956 .
Chr2	stalkie_big_nohaplotig	CDS	52555012	52555703	.	+	2	Parent=comp153223_c2_seq1.mrna1;Target=comp153223_c2_seq1 1 692 .
Chr2	stalkie_big_nohaplotig	mRNA	51449078	51449879	.	+	.	ID=comp152316_c0_seq1.mrna1;geneID=comp152316_c0_seq1.path1;Name=comp152316_c0_seq1;Dir=indeterminatecoverage=96.7;identity=99.7;matches=763;mismatches=1;indels=1;unknowns=0;Target=comp152316_c0_seq1 461 165 .;locus=RLOC_00017298
Chr2	stalkie_big_nohaplotig	exon	51449078	51449558	99	+	.	Parent=comp152316_c0_seq1.mrna1;Target=comp152316_c0_seq1 484 5 .
Chr2	stalkie_big_nohaplotig	exon	51449596	51449879	100	+	.	Parent=comp152316_c0_seq1.mrna1;Target=comp152316_c0_seq1 768 485 .
Chr2	stalkie_big_nohaplotig	CDS	51449239	51449535	.	+	0	Parent=comp152316_c0_seq1.mrna1
Chr2	gffcl	locus	51457193	51459644	.	-	.	ID=RLOC_00017299;geneIDs=comp161507_c0_seq1.path2;transcripts=comp161507_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	51457193	51459644	.	-	.	ID=comp161507_c0_seq1.mrna2;geneID=comp161507_c0_seq1.path2;Name=comp161507_c0_seq1;Dir=antisensecoverage=50.9;identity=94.6;matches=771;mismatches=11;indels=33;unknowns=0;locus=RLOC_00017299
Chr2	stalkie_big_nohaplotig	exon	51457193	51457662	100	-	.	Parent=comp161507_c0_seq1.mrna2;Target=comp161507_c0_seq1 752 1221 -
Chr2	stalkie_big_nohaplotig	exon	51459333	51459644	87	-	.	Parent=comp161507_c0_seq1.mrna2;Target=comp161507_c0_seq1 1222 1566 -
Chr2	stalkie_big_nohaplotig	CDS	51457484	51457662	.	-	2	Parent=comp161507_c0_seq1.mrna2;Target=comp161507_c0_seq1 1043 1221 .
Chr2	stalkie_big_nohaplotig	CDS	51459333	51459351	.	-	0	Parent=comp161507_c0_seq1.mrna2;Target=comp161507_c0_seq1 1222 1240 .
Chr2	gffcl	locus	51476284	51476323	.	-	.	ID=RLOC_00017300;geneIDs=FBgn0015872.1.path1;transcripts=FBgn0015872.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51476284	51476323	.	-	.	ID=FBgn0015872.1.mrna1;geneID=FBgn0015872.1.path1;Name=FBgn0015872.1;Dir=indeterminatecoverage=5.1;identity=100.0;matches=40;mismatches=0;indels=0;unknowns=0;Target=FBgn0015872.1 40 1 .;locus=RLOC_00017300
Chr2	stalkie_big_nohaplotig	exon	51476284	51476323	100	-	.	Parent=FBgn0015872.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	51476284	51476323	.	-	0	Parent=FBgn0015872.1.mrna1
Chr2	gffcl	locus	51523106	51523408	.	+	.	ID=RLOC_00017301;geneIDs=comp142204_c0_seq1.path1;transcripts=comp142204_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51523106	51523408	.	+	.	ID=comp142204_c0_seq1.mrna1;geneID=comp142204_c0_seq1.path1;Name=comp142204_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=224;mismatches=1;indels=0;unknowns=0;Target=comp142204_c0_seq1 1 192 +;locus=RLOC_00017301
Chr2	stalkie_big_nohaplotig	exon	51523106	51523309	99	+	.	Parent=comp142204_c0_seq1.mrna1;Target=comp142204_c0_seq1 1 204 +
Chr2	stalkie_big_nohaplotig	exon	51523388	51523408	100	+	.	Parent=comp142204_c0_seq1.mrna1;Target=comp142204_c0_seq1 205 225 +
Chr2	stalkie_big_nohaplotig	CDS	51523106	51523297	.	+	0	Parent=comp142204_c0_seq1.mrna1
Chr2	gffcl	locus	51523421	51525495	.	+	.	ID=RLOC_00017302;geneIDs=FBgn0033635.1.path1,comp47054_c0_seq1.path1;transcripts=FBgn0033635.1.mrna1,comp47054_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51523421	51525495	.	+	.	ID=FBgn0033635.1.mrna1;geneID=FBgn0033635.1.path1;Name=FBgn0033635.1;Dir=sensecoverage=100.0;identity=99.8;matches=814;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017302
Chr2	stalkie_big_nohaplotig	exon	51523421	51523532	100	+	.	Parent=FBgn0033635.1.mrna1;Target=FBgn0033635.1 1 112 +
Chr2	stalkie_big_nohaplotig	exon	51523601	51523704	100	+	.	Parent=FBgn0033635.1.mrna1;Target=FBgn0033635.1 113 216 +
Chr2	stalkie_big_nohaplotig	exon	51523781	51523924	100	+	.	Parent=FBgn0033635.1.mrna1;Target=FBgn0033635.1 217 360 +
Chr2	stalkie_big_nohaplotig	exon	51524724	51524871	98	+	.	Parent=FBgn0033635.1.mrna1;Target=FBgn0033635.1 361 508 +
Chr2	stalkie_big_nohaplotig	exon	51524935	51525209	100	+	.	Parent=FBgn0033635.1.mrna1;Target=FBgn0033635.1 509 783 +
Chr2	stalkie_big_nohaplotig	exon	51525463	51525495	100	+	.	Parent=FBgn0033635.1.mrna1;Target=FBgn0033635.1 784 816 +
Chr2	stalkie_big_nohaplotig	CDS	51523421	51523532	.	+	0	Parent=FBgn0033635.1.mrna1;Target=FBgn0033635.1 1 112 +
Chr2	stalkie_big_nohaplotig	CDS	51523601	51523704	.	+	2	Parent=FBgn0033635.1.mrna1;Target=FBgn0033635.1 113 216 +
Chr2	stalkie_big_nohaplotig	CDS	51523781	51523924	.	+	0	Parent=FBgn0033635.1.mrna1;Target=FBgn0033635.1 217 360 +
Chr2	stalkie_big_nohaplotig	CDS	51524724	51524871	.	+	0	Parent=FBgn0033635.1.mrna1;Target=FBgn0033635.1 361 508 +
Chr2	stalkie_big_nohaplotig	CDS	51524935	51525209	.	+	2	Parent=FBgn0033635.1.mrna1;Target=FBgn0033635.1 509 783 +
Chr2	stalkie_big_nohaplotig	CDS	51525463	51525495	.	+	0	Parent=FBgn0033635.1.mrna1;Target=FBgn0033635.1 784 816 +
Chr2	stalkie_big_nohaplotig	mRNA	51525186	51525460	.	+	.	ID=comp47054_c0_seq1.mrna1;geneID=comp47054_c0_seq1.path1;Name=comp47054_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=213;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017302
Chr2	stalkie_big_nohaplotig	exon	51525186	51525355	100	+	.	Parent=comp47054_c0_seq1.mrna1;Target=comp47054_c0_seq1 1 170 +
Chr2	stalkie_big_nohaplotig	exon	51525418	51525460	100	+	.	Parent=comp47054_c0_seq1.mrna1;Target=comp47054_c0_seq1 171 213 +
Chr2	stalkie_big_nohaplotig	CDS	51525232	51525355	.	+	0	Parent=comp47054_c0_seq1.mrna1;Target=comp47054_c0_seq1 47 170 +
Chr2	stalkie_big_nohaplotig	CDS	51525418	51525440	.	+	2	Parent=comp47054_c0_seq1.mrna1;Target=comp47054_c0_seq1 171 193 +
Chr2	gffcl	locus	51528492	51530842	.	+	.	ID=RLOC_00017303;geneIDs=FBgn0260775.1.path1;transcripts=FBgn0260775.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51528492	51530842	.	+	.	ID=FBgn0260775.1.mrna1;geneID=FBgn0260775.1.path1;Name=FBgn0260775.1;Dir=sensecoverage=100.0;identity=98.8;matches=643;mismatches=8;indels=0;unknowns=0;locus=RLOC_00017303
Chr2	stalkie_big_nohaplotig	exon	51528492	51528541	98	+	.	Parent=FBgn0260775.1.mrna1;Target=FBgn0260775.1 1 50 +
Chr2	stalkie_big_nohaplotig	exon	51528596	51528701	100	+	.	Parent=FBgn0260775.1.mrna1;Target=FBgn0260775.1 51 156 +
Chr2	stalkie_big_nohaplotig	exon	51530196	51530383	99	+	.	Parent=FBgn0260775.1.mrna1;Target=FBgn0260775.1 157 344 +
Chr2	stalkie_big_nohaplotig	exon	51530448	51530600	98	+	.	Parent=FBgn0260775.1.mrna1;Target=FBgn0260775.1 345 497 +
Chr2	stalkie_big_nohaplotig	exon	51530689	51530842	97	+	.	Parent=FBgn0260775.1.mrna1;Target=FBgn0260775.1 498 651 +
Chr2	stalkie_big_nohaplotig	CDS	51528492	51528541	.	+	0	Parent=FBgn0260775.1.mrna1;Target=FBgn0260775.1 1 50 +
Chr2	stalkie_big_nohaplotig	CDS	51528596	51528701	.	+	1	Parent=FBgn0260775.1.mrna1;Target=FBgn0260775.1 51 156 +
Chr2	stalkie_big_nohaplotig	CDS	51530196	51530383	.	+	0	Parent=FBgn0260775.1.mrna1;Target=FBgn0260775.1 157 344 +
Chr2	stalkie_big_nohaplotig	CDS	51530448	51530600	.	+	1	Parent=FBgn0260775.1.mrna1;Target=FBgn0260775.1 345 497 +
Chr2	stalkie_big_nohaplotig	CDS	51530689	51530842	.	+	1	Parent=FBgn0260775.1.mrna1;Target=FBgn0260775.1 498 651 +
Chr2	gffcl	locus	51531285	51531848	.	+	.	ID=RLOC_00017304;geneIDs=comp155959_c0_seq1.path1;transcripts=comp155959_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51531285	51531848	.	+	.	ID=comp155959_c0_seq1.mrna1;geneID=comp155959_c0_seq1.path1;Name=comp155959_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=553;mismatches=11;indels=3;unknowns=0;Target=comp155959_c0_seq1 567 1 .;CDS_Target=comp155959_c0_seq1 375 238 .;locus=RLOC_00017304
Chr2	stalkie_big_nohaplotig	exon	51531285	51531848	97	+	.	Parent=comp155959_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	51531521	51531658	.	+	0	Parent=comp155959_c0_seq1.mrna1
Chr2	gffcl	locus	51533674	51552443	.	-	.	ID=RLOC_00017305;geneIDs=FBgn0019643.1.path1,comp153002_c0_seq1.path1;transcripts=comp153002_c0_seq1.mrna1,FBgn0019643.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51533674	51544070	.	-	.	ID=comp153002_c0_seq1.mrna1;geneID=comp153002_c0_seq1.path1;Name=comp153002_c0_seq1;Dir=antisensecoverage=47.1;identity=99.5;matches=1535;mismatches=8;indels=0;unknowns=0;locus=RLOC_00017305
Chr2	stalkie_big_nohaplotig	exon	51533674	51534670	99	-	.	Parent=comp153002_c0_seq1.mrna1;Target=comp153002_c0_seq1 128 1124 -
Chr2	stalkie_big_nohaplotig	exon	51534730	51534882	100	-	.	Parent=comp153002_c0_seq1.mrna1;Target=comp153002_c0_seq1 1125 1277 -
Chr2	stalkie_big_nohaplotig	exon	51543678	51544070	100	-	.	Parent=comp153002_c0_seq1.mrna1;Target=comp153002_c0_seq1 1278 1670 -
Chr2	stalkie_big_nohaplotig	CDS	51534242	51534670	.	-	0	Parent=comp153002_c0_seq1.mrna1;Target=comp153002_c0_seq1 696 1124 .
Chr2	stalkie_big_nohaplotig	CDS	51534730	51534882	.	-	0	Parent=comp153002_c0_seq1.mrna1;Target=comp153002_c0_seq1 1125 1277 .
Chr2	stalkie_big_nohaplotig	CDS	51543678	51543839	.	-	0	Parent=comp153002_c0_seq1.mrna1;Target=comp153002_c0_seq1 1278 1439 .
Chr2	stalkie_big_nohaplotig	mRNA	51534245	51552443	.	-	.	ID=FBgn0019643.1.mrna1;geneID=FBgn0019643.1.path1;Name=FBgn0019643.1;Dir=sensecoverage=100.0;identity=99.9;matches=893;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017305
Chr2	stalkie_big_nohaplotig	exon	51534245	51534670	99	-	.	Parent=FBgn0019643.1.mrna1;Target=FBgn0019643.1 469 894 +
Chr2	stalkie_big_nohaplotig	exon	51534730	51534882	100	-	.	Parent=FBgn0019643.1.mrna1;Target=FBgn0019643.1 316 468 +
Chr2	stalkie_big_nohaplotig	exon	51543678	51543878	100	-	.	Parent=FBgn0019643.1.mrna1;Target=FBgn0019643.1 115 315 +
Chr2	stalkie_big_nohaplotig	exon	51552330	51552443	100	-	.	Parent=FBgn0019643.1.mrna1;Target=FBgn0019643.1 1 114 +
Chr2	stalkie_big_nohaplotig	CDS	51534245	51534670	.	-	0	Parent=FBgn0019643.1.mrna1;Target=FBgn0019643.1 469 894 +
Chr2	stalkie_big_nohaplotig	CDS	51534730	51534882	.	-	0	Parent=FBgn0019643.1.mrna1;Target=FBgn0019643.1 316 468 +
Chr2	stalkie_big_nohaplotig	CDS	51543678	51543878	.	-	0	Parent=FBgn0019643.1.mrna1;Target=FBgn0019643.1 115 315 +
Chr2	stalkie_big_nohaplotig	CDS	51552330	51552443	.	-	0	Parent=FBgn0019643.1.mrna1;Target=FBgn0019643.1 1 114 +
Chr2	gffcl	locus	51536595	51537245	.	+	.	ID=RLOC_00017306;geneIDs=comp139188_c0_seq1.path1;transcripts=comp139188_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51536595	51537245	.	+	.	ID=comp139188_c0_seq1.mrna1;geneID=comp139188_c0_seq1.path1;Name=comp139188_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=642;mismatches=9;indels=0;unknowns=0;Target=comp139188_c0_seq1 651 1 .;CDS_Target=comp139188_c0_seq1 130 2 .;locus=RLOC_00017306
Chr2	stalkie_big_nohaplotig	exon	51536595	51537245	98	+	.	Parent=comp139188_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	51536596	51536724	.	+	0	Parent=comp139188_c0_seq1.mrna1
Chr2	gffcl	locus	51552715	51552899	.	-	.	ID=RLOC_00017307;geneIDs=comp114822_c0_seq1.path1;transcripts=comp114822_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51552715	51552899	.	-	.	ID=comp114822_c0_seq1.mrna1;geneID=comp114822_c0_seq1.path1;Name=comp114822_c0_seq1;Dir=indeterminatecoverage=88.9;identity=97.8;matches=181;mismatches=4;indels=0;unknowns=0;Target=comp114822_c0_seq1 208 24 .;CDS_Target=comp114822_c0_seq1 93 25 .;locus=RLOC_00017307
Chr2	stalkie_big_nohaplotig	exon	51552715	51552899	97	-	.	Parent=comp114822_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	51552830	51552898	.	-	0	Parent=comp114822_c0_seq1.mrna1
Chr2	gffcl	locus	51552904	51553257	.	-	.	ID=RLOC_00017308;geneIDs=comp148119_c0_seq1.path1;transcripts=comp148119_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51552904	51553257	.	-	.	ID=comp148119_c0_seq1.mrna1;geneID=comp148119_c0_seq1.path1;Name=comp148119_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=353;mismatches=1;indels=0;unknowns=0;Target=comp148119_c0_seq1 354 1 .;CDS_Target=comp148119_c0_seq1 242 138 .;locus=RLOC_00017308
Chr2	stalkie_big_nohaplotig	exon	51552904	51553257	99	-	.	Parent=comp148119_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	51553016	51553120	.	-	0	Parent=comp148119_c0_seq1.mrna1
Chr2	gffcl	locus	51559742	51560412	.	-	.	ID=RLOC_00017309;geneIDs=comp147535_c0_seq1.path1;transcripts=comp147535_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51559742	51560412	.	-	.	ID=comp147535_c0_seq1.mrna1;geneID=comp147535_c0_seq1.path1;Name=comp147535_c0_seq1;Dir=sensecoverage=99.3;identity=100.0;matches=454;mismatches=0;indels=0;unknowns=0;Target=comp147535_c0_seq1 234 422 +;locus=RLOC_00017309
Chr2	stalkie_big_nohaplotig	exon	51559742	51559980	100	-	.	Parent=comp147535_c0_seq1.mrna1;Target=comp147535_c0_seq1 216 454 +
Chr2	stalkie_big_nohaplotig	exon	51560040	51560111	100	-	.	Parent=comp147535_c0_seq1.mrna1;Target=comp147535_c0_seq1 144 215 +
Chr2	stalkie_big_nohaplotig	exon	51560270	51560412	100	-	.	Parent=comp147535_c0_seq1.mrna1;Target=comp147535_c0_seq1 1 143 +
Chr2	stalkie_big_nohaplotig	CDS	51559774	51559962	.	-	0	Parent=comp147535_c0_seq1.mrna1
Chr2	gffcl	locus	51590386	51607194	.	+	.	ID=RLOC_00017311;geneIDs=FBgn0015872.1.path2;transcripts=FBgn0015872.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	51590386	51607194	.	+	.	ID=FBgn0015872.1.mrna2;geneID=FBgn0015872.1.path2;Name=FBgn0015872.1;Dir=sensecoverage=94.7;identity=100.0;matches=736;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017311
Chr2	stalkie_big_nohaplotig	exon	51590386	51590579	100	+	.	Parent=FBgn0015872.1.mrna2;Target=FBgn0015872.1 41 234 +
Chr2	stalkie_big_nohaplotig	exon	51603923	51604066	100	+	.	Parent=FBgn0015872.1.mrna2;Target=FBgn0015872.1 235 378 +
Chr2	stalkie_big_nohaplotig	exon	51606733	51606945	100	+	.	Parent=FBgn0015872.1.mrna2;Target=FBgn0015872.1 379 591 +
Chr2	stalkie_big_nohaplotig	exon	51607010	51607194	100	+	.	Parent=FBgn0015872.1.mrna2;Target=FBgn0015872.1 592 776 +
Chr2	stalkie_big_nohaplotig	CDS	51590386	51590579	.	+	1	Parent=FBgn0015872.1.mrna2;Target=FBgn0015872.1 41 234 +
Chr2	stalkie_big_nohaplotig	CDS	51603923	51604066	.	+	2	Parent=FBgn0015872.1.mrna2;Target=FBgn0015872.1 235 378 +
Chr2	stalkie_big_nohaplotig	CDS	51606733	51606945	.	+	2	Parent=FBgn0015872.1.mrna2;Target=FBgn0015872.1 379 591 +
Chr2	stalkie_big_nohaplotig	CDS	51607010	51607192	.	+	2	Parent=FBgn0015872.1.mrna2;Target=FBgn0015872.1 592 774 +
Chr2	stalkie_big_nohaplotig	mRNA	51637910	51638282	.	-	.	ID=comp130946_c0_seq1.mrna1;geneID=comp130946_c0_seq1.path1;Name=comp130946_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=373;mismatches=0;indels=0;unknowns=0;Target=comp130946_c0_seq1 373 1 .;CDS_Target=comp130946_c0_seq1 291 172 .;locus=RLOC_00017312
Chr2	stalkie_big_nohaplotig	exon	51637910	51638282	100	-	.	Parent=comp130946_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	51637992	51638111	.	-	0	Parent=comp130946_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51671131	51725069	.	-	.	ID=FBgn0085428.1.mrna1;geneID=FBgn0085428.1.path1;Name=FBgn0085428.1;Dir=sensecoverage=100.0;identity=99.6;matches=4300;mismatches=17;indels=0;unknowns=0;locus=RLOC_00017312
Chr2	stalkie_big_nohaplotig	exon	51671131	51671325	100	-	.	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 4123 4317 +
Chr2	stalkie_big_nohaplotig	exon	51673297	51673393	100	-	.	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 4026 4122 +
Chr2	stalkie_big_nohaplotig	exon	51673455	51673771	100	-	.	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 3709 4025 +
Chr2	stalkie_big_nohaplotig	exon	51673892	51674050	100	-	.	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 3550 3708 +
Chr2	stalkie_big_nohaplotig	exon	51674283	51674362	98	-	.	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 3470 3549 +
Chr2	stalkie_big_nohaplotig	exon	51674418	51674468	96	-	.	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 3419 3469 +
Chr2	stalkie_big_nohaplotig	exon	51675136	51675350	99	-	.	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 3204 3418 +
Chr2	stalkie_big_nohaplotig	exon	51675416	51676721	99	-	.	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 1898 3203 +
Chr2	stalkie_big_nohaplotig	exon	51676783	51677024	99	-	.	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 1656 1897 +
Chr2	stalkie_big_nohaplotig	exon	51703795	51703919	100	-	.	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 1531 1655 +
Chr2	stalkie_big_nohaplotig	exon	51703979	51704215	100	-	.	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 1294 1530 +
Chr2	stalkie_big_nohaplotig	exon	51704324	51704444	100	-	.	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 1173 1293 +
Chr2	stalkie_big_nohaplotig	exon	51706640	51706737	100	-	.	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 1075 1172 +
Chr2	stalkie_big_nohaplotig	exon	51707299	51707413	100	-	.	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 960 1074 +
Chr2	stalkie_big_nohaplotig	exon	51714688	51714782	100	-	.	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 865 959 +
Chr2	stalkie_big_nohaplotig	exon	51724206	51725069	99	-	.	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 1 864 +
Chr2	stalkie_big_nohaplotig	CDS	51671131	51671325	.	-	0	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 4123 4317 +
Chr2	stalkie_big_nohaplotig	CDS	51673297	51673393	.	-	1	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 4026 4122 +
Chr2	stalkie_big_nohaplotig	CDS	51673455	51673771	.	-	0	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 3709 4025 +
Chr2	stalkie_big_nohaplotig	CDS	51673892	51674050	.	-	0	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 3550 3708 +
Chr2	stalkie_big_nohaplotig	CDS	51674283	51674362	.	-	2	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 3470 3549 +
Chr2	stalkie_big_nohaplotig	CDS	51674418	51674468	.	-	2	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 3419 3469 +
Chr2	stalkie_big_nohaplotig	CDS	51675136	51675350	.	-	1	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 3204 3418 +
Chr2	stalkie_big_nohaplotig	CDS	51675416	51676721	.	-	2	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 1898 3203 +
Chr2	stalkie_big_nohaplotig	CDS	51676783	51677024	.	-	1	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 1656 1897 +
Chr2	stalkie_big_nohaplotig	CDS	51703795	51703919	.	-	0	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 1531 1655 +
Chr2	stalkie_big_nohaplotig	CDS	51703979	51704215	.	-	0	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 1294 1530 +
Chr2	stalkie_big_nohaplotig	CDS	51704324	51704444	.	-	1	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 1173 1293 +
Chr2	stalkie_big_nohaplotig	CDS	51706640	51706737	.	-	0	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 1075 1172 +
Chr2	stalkie_big_nohaplotig	CDS	51707299	51707413	.	-	1	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 960 1074 +
Chr2	stalkie_big_nohaplotig	CDS	51714688	51714782	.	-	0	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 865 959 +
Chr2	stalkie_big_nohaplotig	CDS	51724206	51725069	.	-	0	Parent=FBgn0085428.1.mrna1;Target=FBgn0085428.1 1 864 +
Chr2	stalkie_big_nohaplotig	mRNA	52108105	52110512	.	-	.	ID=comp145553_c0_seq1.mrna1;geneID=comp145553_c0_seq1.path1;Name=comp145553_c0_seq1;Dir=antisensecoverage=87.7;identity=99.7;matches=321;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017312
Chr2	stalkie_big_nohaplotig	exon	52108105	52108149	97	-	.	Parent=comp145553_c0_seq1.mrna1;Target=comp145553_c0_seq1 1 45 -
Chr2	stalkie_big_nohaplotig	exon	52110236	52110512	100	-	.	Parent=comp145553_c0_seq1.mrna1;Target=comp145553_c0_seq1 46 322 -
Chr2	stalkie_big_nohaplotig	CDS	52108106	52108149	.	-	2	Parent=comp145553_c0_seq1.mrna1;Target=comp145553_c0_seq1 2 45 .
Chr2	stalkie_big_nohaplotig	CDS	52110236	52110347	.	-	0	Parent=comp145553_c0_seq1.mrna1;Target=comp145553_c0_seq1 46 157 .
Chr2	stalkie_big_nohaplotig	mRNA	52108126	52110168	.	-	.	ID=comp135948_c0_seq1.mrna1;geneID=comp135948_c0_seq1.path1;Name=comp135948_c0_seq1;Dir=antisensecoverage=100.0;identity=98.5;matches=399;mismatches=5;indels=1;unknowns=0;locus=RLOC_00017312
Chr2	stalkie_big_nohaplotig	exon	52108126	52108149	100	-	.	Parent=comp135948_c0_seq1.mrna1;Target=comp135948_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	exon	52109788	52110168	98	-	.	Parent=comp135948_c0_seq1.mrna1;Target=comp135948_c0_seq1 25 404 -
Chr2	stalkie_big_nohaplotig	CDS	52108127	52108149	.	-	2	Parent=comp135948_c0_seq1.mrna1;Target=comp135948_c0_seq1 2 24 .
Chr2	stalkie_big_nohaplotig	CDS	52109788	52109899	.	-	0	Parent=comp135948_c0_seq1.mrna1;Target=comp135948_c0_seq1 25 136 .
Chr2	gffcl	locus	51616643	51619028	.	-	.	ID=RLOC_00017313;geneIDs=FBgn0033633.1.path1;transcripts=FBgn0033633.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51616643	51619028	.	-	.	ID=FBgn0033633.1.mrna1;geneID=FBgn0033633.1.path1;Name=FBgn0033633.1;Dir=sensecoverage=100.0;identity=99.2;matches=1968;mismatches=15;indels=0;unknowns=0;locus=RLOC_00017313
Chr2	stalkie_big_nohaplotig	exon	51616643	51616834	99	-	.	Parent=FBgn0033633.1.mrna1;Target=FBgn0033633.1 1792 1983 +
Chr2	stalkie_big_nohaplotig	exon	51616905	51617244	99	-	.	Parent=FBgn0033633.1.mrna1;Target=FBgn0033633.1 1452 1791 +
Chr2	stalkie_big_nohaplotig	exon	51617310	51617645	96	-	.	Parent=FBgn0033633.1.mrna1;Target=FBgn0033633.1 1116 1451 +
Chr2	stalkie_big_nohaplotig	exon	51617700	51617942	99	-	.	Parent=FBgn0033633.1.mrna1;Target=FBgn0033633.1 873 1115 +
Chr2	stalkie_big_nohaplotig	exon	51618004	51618348	100	-	.	Parent=FBgn0033633.1.mrna1;Target=FBgn0033633.1 528 872 +
Chr2	stalkie_big_nohaplotig	exon	51618416	51618611	100	-	.	Parent=FBgn0033633.1.mrna1;Target=FBgn0033633.1 332 527 +
Chr2	stalkie_big_nohaplotig	exon	51618698	51619028	99	-	.	Parent=FBgn0033633.1.mrna1;Target=FBgn0033633.1 1 331 +
Chr2	stalkie_big_nohaplotig	CDS	51616643	51616834	.	-	0	Parent=FBgn0033633.1.mrna1;Target=FBgn0033633.1 1792 1983 +
Chr2	stalkie_big_nohaplotig	CDS	51616905	51617244	.	-	1	Parent=FBgn0033633.1.mrna1;Target=FBgn0033633.1 1452 1791 +
Chr2	stalkie_big_nohaplotig	CDS	51617310	51617645	.	-	1	Parent=FBgn0033633.1.mrna1;Target=FBgn0033633.1 1116 1451 +
Chr2	stalkie_big_nohaplotig	CDS	51617700	51617942	.	-	1	Parent=FBgn0033633.1.mrna1;Target=FBgn0033633.1 873 1115 +
Chr2	stalkie_big_nohaplotig	CDS	51618004	51618348	.	-	1	Parent=FBgn0033633.1.mrna1;Target=FBgn0033633.1 528 872 +
Chr2	stalkie_big_nohaplotig	CDS	51618416	51618611	.	-	2	Parent=FBgn0033633.1.mrna1;Target=FBgn0033633.1 332 527 +
Chr2	stalkie_big_nohaplotig	CDS	51618698	51619028	.	-	0	Parent=FBgn0033633.1.mrna1;Target=FBgn0033633.1 1 331 +
Chr2	gffcl	locus	51621734	51629890	.	-	.	ID=RLOC_00017314;geneIDs=FBgn0027590.1.path1;transcripts=FBgn0027590.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51621734	51629890	.	-	.	ID=FBgn0027590.1.mrna1;geneID=FBgn0027590.1.path1;Name=FBgn0027590.1;Dir=sensecoverage=100.0;identity=99.2;matches=708;mismatches=6;indels=0;unknowns=0;locus=RLOC_00017314
Chr2	stalkie_big_nohaplotig	exon	51621734	51622313	98	-	.	Parent=FBgn0027590.1.mrna1;Target=FBgn0027590.1 135 714 +
Chr2	stalkie_big_nohaplotig	exon	51622802	51622899	100	-	.	Parent=FBgn0027590.1.mrna1;Target=FBgn0027590.1 37 134 +
Chr2	stalkie_big_nohaplotig	exon	51629855	51629890	100	-	.	Parent=FBgn0027590.1.mrna1;Target=FBgn0027590.1 1 36 +
Chr2	stalkie_big_nohaplotig	CDS	51621734	51622313	.	-	1	Parent=FBgn0027590.1.mrna1;Target=FBgn0027590.1 135 714 +
Chr2	stalkie_big_nohaplotig	CDS	51622802	51622899	.	-	0	Parent=FBgn0027590.1.mrna1;Target=FBgn0027590.1 37 134 +
Chr2	stalkie_big_nohaplotig	CDS	51629855	51629890	.	-	0	Parent=FBgn0027590.1.mrna1;Target=FBgn0027590.1 1 36 +
Chr2	gffcl	locus	51623150	51623764	.	-	.	ID=RLOC_00017315;geneIDs=comp148751_c0_seq1.path1;transcripts=comp148751_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51623150	51623764	.	-	.	ID=comp148751_c0_seq1.mrna1;geneID=comp148751_c0_seq1.path1;Name=comp148751_c0_seq1;Dir=indeterminatecoverage=98.8;identity=92.1;matches=583;mismatches=32;indels=18;unknowns=0;Target=comp148751_c0_seq1 641 9 .;CDS_Target=comp148751_c0_seq1 638 510 .;locus=RLOC_00017315
Chr2	stalkie_big_nohaplotig	exon	51623150	51623764	92	-	.	Parent=comp148751_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	51623153	51623281	.	-	0	Parent=comp148751_c0_seq1.mrna1
Chr2	gffcl	locus	51628070	51628532	.	+	.	ID=RLOC_00017316;geneIDs=comp148706_c1_seq1.path1;transcripts=comp148706_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51628070	51628532	.	+	.	ID=comp148706_c1_seq1.mrna1;geneID=comp148706_c1_seq1.path1;Name=comp148706_c1_seq1;Dir=indeterminatecoverage=100.0;identity=91.0;matches=426;mismatches=37;indels=5;unknowns=0;Target=comp148706_c1_seq1 468 1 .;CDS_Target=comp148706_c1_seq1 283 140 .;locus=RLOC_00017316
Chr2	stalkie_big_nohaplotig	exon	51628070	51628532	91	+	.	Parent=comp148706_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	51628209	51628352	.	+	0	Parent=comp148706_c1_seq1.mrna1
Chr2	gffcl	locus	51633424	51633759	.	-	.	ID=RLOC_00017317;geneIDs=comp86466_c0_seq1.path1;transcripts=comp86466_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51633424	51633759	.	-	.	ID=comp86466_c0_seq1.mrna1;geneID=comp86466_c0_seq1.path1;Name=comp86466_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.4;matches=324;mismatches=12;indels=0;unknowns=0;Target=comp86466_c0_seq1 336 1 .;CDS_Target=comp86466_c0_seq1 100 2 .;locus=RLOC_00017317
Chr2	stalkie_big_nohaplotig	exon	51633424	51633759	96	-	.	Parent=comp86466_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	51633660	51633758	.	-	0	Parent=comp86466_c0_seq1.mrna1
Chr2	gffcl	locus	51633766	51634908	.	+	.	ID=RLOC_00017318;geneIDs=comp147023_c0_seq1.path1;transcripts=comp147023_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51633766	51634908	.	+	.	ID=comp147023_c0_seq1.mrna1;geneID=comp147023_c0_seq1.path1;Name=comp147023_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=1084;mismatches=8;indels=24;unknowns=0;Target=comp147023_c0_seq1 1083 913 .;locus=RLOC_00017318
Chr2	stalkie_big_nohaplotig	exon	51633766	51634666	96	+	.	Parent=comp147023_c0_seq1.mrna1;Target=comp147023_c0_seq1 881 1 .
Chr2	stalkie_big_nohaplotig	exon	51634696	51634908	99	+	.	Parent=comp147023_c0_seq1.mrna1;Target=comp147023_c0_seq1 1111 899 .
Chr2	stalkie_big_nohaplotig	CDS	51634710	51634880	.	+	0	Parent=comp147023_c0_seq1.mrna1
Chr2	gffcl	locus	51635138	51649637	.	-	.	ID=RLOC_00017319;geneIDs=FBgn0035060.1.path1;transcripts=FBgn0035060.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51635138	51649637	.	-	.	ID=FBgn0035060.1.mrna1;geneID=FBgn0035060.1.path1;Name=FBgn0035060.1;Dir=sensecoverage=100.0;identity=99.5;matches=4070;mismatches=22;indels=0;unknowns=0;locus=RLOC_00017319
Chr2	stalkie_big_nohaplotig	exon	51635138	51636273	99	-	.	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 2957 4092 +
Chr2	stalkie_big_nohaplotig	exon	51636922	51637396	99	-	.	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 2482 2956 +
Chr2	stalkie_big_nohaplotig	exon	51640483	51640575	100	-	.	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 2389 2481 +
Chr2	stalkie_big_nohaplotig	exon	51642477	51642665	100	-	.	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 2200 2388 +
Chr2	stalkie_big_nohaplotig	exon	51642725	51643177	100	-	.	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 1747 2199 +
Chr2	stalkie_big_nohaplotig	exon	51643828	51644025	99	-	.	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 1549 1746 +
Chr2	stalkie_big_nohaplotig	exon	51644263	51644325	98	-	.	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 1486 1548 +
Chr2	stalkie_big_nohaplotig	exon	51645478	51645567	98	-	.	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 1396 1485 +
Chr2	stalkie_big_nohaplotig	exon	51645631	51645780	98	-	.	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 1246 1395 +
Chr2	stalkie_big_nohaplotig	exon	51645853	51646027	99	-	.	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 1071 1245 +
Chr2	stalkie_big_nohaplotig	exon	51648126	51648883	99	-	.	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 313 1070 +
Chr2	stalkie_big_nohaplotig	exon	51649243	51649479	99	-	.	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 76 312 +
Chr2	stalkie_big_nohaplotig	exon	51649563	51649637	100	-	.	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 1 75 +
Chr2	stalkie_big_nohaplotig	CDS	51635138	51636273	.	-	2	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 2957 4092 +
Chr2	stalkie_big_nohaplotig	CDS	51636922	51637396	.	-	0	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 2482 2956 +
Chr2	stalkie_big_nohaplotig	CDS	51640483	51640575	.	-	0	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 2389 2481 +
Chr2	stalkie_big_nohaplotig	CDS	51642477	51642665	.	-	0	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 2200 2388 +
Chr2	stalkie_big_nohaplotig	CDS	51642725	51643177	.	-	0	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 1747 2199 +
Chr2	stalkie_big_nohaplotig	CDS	51643828	51644025	.	-	0	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 1549 1746 +
Chr2	stalkie_big_nohaplotig	CDS	51644263	51644325	.	-	0	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 1486 1548 +
Chr2	stalkie_big_nohaplotig	CDS	51645478	51645567	.	-	0	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 1396 1485 +
Chr2	stalkie_big_nohaplotig	CDS	51645631	51645780	.	-	0	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 1246 1395 +
Chr2	stalkie_big_nohaplotig	CDS	51645853	51646027	.	-	1	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 1071 1245 +
Chr2	stalkie_big_nohaplotig	CDS	51648126	51648883	.	-	0	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 313 1070 +
Chr2	stalkie_big_nohaplotig	CDS	51649243	51649479	.	-	0	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 76 312 +
Chr2	stalkie_big_nohaplotig	CDS	51649563	51649637	.	-	0	Parent=FBgn0035060.1.mrna1;Target=FBgn0035060.1 1 75 +
Chr2	gffcl	locus	51652693	51681346	.	+	.	ID=RLOC_00017320;geneIDs=FBgn0086908.1.path1;transcripts=FBgn0086908.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51652693	51681346	.	+	.	ID=FBgn0086908.1.mrna1;geneID=FBgn0086908.1.path1;Name=FBgn0086908.1;Dir=sensecoverage=100.0;identity=99.3;matches=4124;mismatches=28;indels=0;unknowns=0;locus=RLOC_00017320
Chr2	stalkie_big_nohaplotig	exon	51652693	51654018	98	+	.	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 1 1326 +
Chr2	stalkie_big_nohaplotig	exon	51655088	51655217	100	+	.	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 1327 1456 +
Chr2	stalkie_big_nohaplotig	exon	51655275	51655576	100	+	.	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 1457 1758 +
Chr2	stalkie_big_nohaplotig	exon	51655643	51655847	99	+	.	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 1759 1963 +
Chr2	stalkie_big_nohaplotig	exon	51678445	51678486	100	+	.	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 1964 2005 +
Chr2	stalkie_big_nohaplotig	exon	51678549	51678672	100	+	.	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 2006 2129 +
Chr2	stalkie_big_nohaplotig	exon	51678797	51679178	99	+	.	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 2130 2511 +
Chr2	stalkie_big_nohaplotig	exon	51679248	51679457	99	+	.	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 2512 2721 +
Chr2	stalkie_big_nohaplotig	exon	51679524	51680030	99	+	.	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 2722 3228 +
Chr2	stalkie_big_nohaplotig	exon	51680095	51680237	99	+	.	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 3229 3371 +
Chr2	stalkie_big_nohaplotig	exon	51680318	51680495	100	+	.	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 3372 3549 +
Chr2	stalkie_big_nohaplotig	exon	51680564	51680689	99	+	.	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 3550 3675 +
Chr2	stalkie_big_nohaplotig	exon	51680749	51680936	100	+	.	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 3676 3863 +
Chr2	stalkie_big_nohaplotig	exon	51680993	51681077	100	+	.	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 3864 3948 +
Chr2	stalkie_big_nohaplotig	exon	51681143	51681346	99	+	.	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 3949 4152 +
Chr2	stalkie_big_nohaplotig	CDS	51652693	51654018	.	+	0	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 1 1326 +
Chr2	stalkie_big_nohaplotig	CDS	51655088	51655217	.	+	0	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 1327 1456 +
Chr2	stalkie_big_nohaplotig	CDS	51655275	51655576	.	+	2	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 1457 1758 +
Chr2	stalkie_big_nohaplotig	CDS	51655643	51655847	.	+	0	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 1759 1963 +
Chr2	stalkie_big_nohaplotig	CDS	51678445	51678486	.	+	2	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 1964 2005 +
Chr2	stalkie_big_nohaplotig	CDS	51678549	51678672	.	+	2	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 2006 2129 +
Chr2	stalkie_big_nohaplotig	CDS	51678797	51679178	.	+	1	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 2130 2511 +
Chr2	stalkie_big_nohaplotig	CDS	51679248	51679457	.	+	0	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 2512 2721 +
Chr2	stalkie_big_nohaplotig	CDS	51679524	51680030	.	+	0	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 2722 3228 +
Chr2	stalkie_big_nohaplotig	CDS	51680095	51680237	.	+	0	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 3229 3371 +
Chr2	stalkie_big_nohaplotig	CDS	51680318	51680495	.	+	1	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 3372 3549 +
Chr2	stalkie_big_nohaplotig	CDS	51680564	51680689	.	+	0	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 3550 3675 +
Chr2	stalkie_big_nohaplotig	CDS	51680749	51680936	.	+	0	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 3676 3863 +
Chr2	stalkie_big_nohaplotig	CDS	51680993	51681077	.	+	1	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 3864 3948 +
Chr2	stalkie_big_nohaplotig	CDS	51681143	51681346	.	+	0	Parent=FBgn0086908.1.mrna1;Target=FBgn0086908.1 3949 4152 +
Chr2	gffcl	locus	51662369	51662944	.	-	.	ID=RLOC_00017321;geneIDs=FBgn0001276.1.path1;transcripts=FBgn0001276.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51662369	51662944	.	-	.	ID=FBgn0001276.1.mrna1;geneID=FBgn0001276.1.path1;Name=FBgn0001276.1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=569;mismatches=7;indels=0;unknowns=0;Target=FBgn0001276.1 576 1 .;locus=RLOC_00017321
Chr2	stalkie_big_nohaplotig	exon	51662369	51662944	98	-	.	Parent=FBgn0001276.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	51662369	51662944	.	-	0	Parent=FBgn0001276.1.mrna1
Chr2	gffcl	locus	51664472	51694353	.	+	.	ID=RLOC_00017322;geneIDs=FBgn0034113.1.path1;transcripts=FBgn0034113.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51664472	51694353	.	+	.	ID=FBgn0034113.1.mrna1;geneID=FBgn0034113.1.path1;Name=FBgn0034113.1;Dir=sensecoverage=99.2;identity=98.9;matches=3636;mismatches=41;indels=0;unknowns=0;locus=RLOC_00017322
Chr2	stalkie_big_nohaplotig	exon	51664472	51664683	100	+	.	Parent=FBgn0034113.1.mrna1;Target=FBgn0034113.1 29 240 +
Chr2	stalkie_big_nohaplotig	exon	51664737	51664752	100	+	.	Parent=FBgn0034113.1.mrna1;Target=FBgn0034113.1 241 256 +
Chr2	stalkie_big_nohaplotig	exon	51688518	51688570	100	+	.	Parent=FBgn0034113.1.mrna1;Target=FBgn0034113.1 257 309 +
Chr2	stalkie_big_nohaplotig	exon	51688636	51688826	97	+	.	Parent=FBgn0034113.1.mrna1;Target=FBgn0034113.1 310 500 +
Chr2	stalkie_big_nohaplotig	exon	51688907	51689486	99	+	.	Parent=FBgn0034113.1.mrna1;Target=FBgn0034113.1 501 1080 +
Chr2	stalkie_big_nohaplotig	exon	51689552	51689679	96	+	.	Parent=FBgn0034113.1.mrna1;Target=FBgn0034113.1 1081 1208 +
Chr2	stalkie_big_nohaplotig	exon	51690217	51690360	97	+	.	Parent=FBgn0034113.1.mrna1;Target=FBgn0034113.1 1209 1352 +
Chr2	stalkie_big_nohaplotig	exon	51691809	51692398	98	+	.	Parent=FBgn0034113.1.mrna1;Target=FBgn0034113.1 1353 1942 +
Chr2	stalkie_big_nohaplotig	exon	51692460	51692583	98	+	.	Parent=FBgn0034113.1.mrna1;Target=FBgn0034113.1 1943 2066 +
Chr2	stalkie_big_nohaplotig	exon	51692652	51693345	99	+	.	Parent=FBgn0034113.1.mrna1;Target=FBgn0034113.1 2067 2760 +
Chr2	stalkie_big_nohaplotig	exon	51693409	51694353	98	+	.	Parent=FBgn0034113.1.mrna1;Target=FBgn0034113.1 2761 3705 +
Chr2	stalkie_big_nohaplotig	CDS	51664474	51664683	.	+	0	Parent=FBgn0034113.1.mrna1;Target=FBgn0034113.1 31 240 +
Chr2	stalkie_big_nohaplotig	CDS	51664737	51664752	.	+	0	Parent=FBgn0034113.1.mrna1;Target=FBgn0034113.1 241 256 +
Chr2	stalkie_big_nohaplotig	CDS	51688518	51688570	.	+	2	Parent=FBgn0034113.1.mrna1;Target=FBgn0034113.1 257 309 +
Chr2	stalkie_big_nohaplotig	CDS	51688636	51688826	.	+	0	Parent=FBgn0034113.1.mrna1;Target=FBgn0034113.1 310 500 +
Chr2	stalkie_big_nohaplotig	CDS	51688907	51689486	.	+	1	Parent=FBgn0034113.1.mrna1;Target=FBgn0034113.1 501 1080 +
Chr2	stalkie_big_nohaplotig	CDS	51689552	51689679	.	+	0	Parent=FBgn0034113.1.mrna1;Target=FBgn0034113.1 1081 1208 +
Chr2	stalkie_big_nohaplotig	CDS	51690217	51690360	.	+	1	Parent=FBgn0034113.1.mrna1;Target=FBgn0034113.1 1209 1352 +
Chr2	stalkie_big_nohaplotig	CDS	51691809	51692398	.	+	1	Parent=FBgn0034113.1.mrna1;Target=FBgn0034113.1 1353 1942 +
Chr2	stalkie_big_nohaplotig	CDS	51692460	51692583	.	+	2	Parent=FBgn0034113.1.mrna1;Target=FBgn0034113.1 1943 2066 +
Chr2	stalkie_big_nohaplotig	CDS	51692652	51693345	.	+	1	Parent=FBgn0034113.1.mrna1;Target=FBgn0034113.1 2067 2760 +
Chr2	stalkie_big_nohaplotig	CDS	51693409	51694353	.	+	0	Parent=FBgn0034113.1.mrna1;Target=FBgn0034113.1 2761 3705 +
Chr2	gffcl	locus	51683433	51684600	.	+	.	ID=RLOC_00017323;geneIDs=comp155163_c0_seq1.path1;transcripts=comp155163_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51683433	51684600	.	+	.	ID=comp155163_c0_seq1.mrna1;geneID=comp155163_c0_seq1.path1;Name=comp155163_c0_seq1;Dir=sensecoverage=97.5;identity=97.7;matches=1021;mismatches=22;indels=2;unknowns=0;locus=RLOC_00017323
Chr2	stalkie_big_nohaplotig	exon	51683433	51683643	95	+	.	Parent=comp155163_c0_seq1.mrna1;Target=comp155163_c0_seq1 28 239 +
Chr2	stalkie_big_nohaplotig	exon	51683697	51684090	99	+	.	Parent=comp155163_c0_seq1.mrna1;Target=comp155163_c0_seq1 240 634 +
Chr2	stalkie_big_nohaplotig	exon	51684163	51684600	97	+	.	Parent=comp155163_c0_seq1.mrna1;Target=comp155163_c0_seq1 635 1072 +
Chr2	stalkie_big_nohaplotig	CDS	51683556	51683643	.	+	0	Parent=comp155163_c0_seq1.mrna1;Target=comp155163_c0_seq1 152 239 +
Chr2	stalkie_big_nohaplotig	CDS	51683697	51683865	.	+	2	Parent=comp155163_c0_seq1.mrna1;Target=comp155163_c0_seq1 240 409 +
Chr2	gffcl	locus	51766405	52021232	.	-	.	ID=RLOC_00017324;geneIDs=FBgn0038734.2.path1,comp136640_c0_seq1.path1;transcripts=comp136640_c0_seq1.mrna1,FBgn0038734.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51766405	52020698	.	-	.	ID=comp136640_c0_seq1.mrna1;geneID=comp136640_c0_seq1.path1;Name=comp136640_c0_seq1;Dir=sensecoverage=74.3;identity=100.0;matches=488;mismatches=0;indels=0;unknowns=0;Target=comp136640_c0_seq1 310 423 +;locus=RLOC_00017324
Chr2	stalkie_big_nohaplotig	exon	51766405	51766749	100	-	.	Parent=comp136640_c0_seq1.mrna1;Target=comp136640_c0_seq1 289 633 +
Chr2	stalkie_big_nohaplotig	exon	51852234	51852316	100	-	.	Parent=comp136640_c0_seq1.mrna1;Target=comp136640_c0_seq1 206 288 +
Chr2	stalkie_big_nohaplotig	exon	51859575	51859581	100	-	.	Parent=comp136640_c0_seq1.mrna1;Target=comp136640_c0_seq1 199 205 +
Chr2	stalkie_big_nohaplotig	exon	51879269	51879274	100	-	.	Parent=comp136640_c0_seq1.mrna1;Target=comp136640_c0_seq1 193 198 +
Chr2	stalkie_big_nohaplotig	exon	51919451	51919453	100	-	.	Parent=comp136640_c0_seq1.mrna1;Target=comp136640_c0_seq1 190 192 +
Chr2	stalkie_big_nohaplotig	exon	51922626	51922630	100	-	.	Parent=comp136640_c0_seq1.mrna1;Target=comp136640_c0_seq1 185 189 +
Chr2	stalkie_big_nohaplotig	exon	51927154	51927157	100	-	.	Parent=comp136640_c0_seq1.mrna1;Target=comp136640_c0_seq1 181 184 +
Chr2	stalkie_big_nohaplotig	exon	51931944	51931946	100	-	.	Parent=comp136640_c0_seq1.mrna1;Target=comp136640_c0_seq1 178 180 +
Chr2	stalkie_big_nohaplotig	exon	51946810	51946814	100	-	.	Parent=comp136640_c0_seq1.mrna1;Target=comp136640_c0_seq1 173 177 +
Chr2	stalkie_big_nohaplotig	exon	51957289	51957291	100	-	.	Parent=comp136640_c0_seq1.mrna1;Target=comp136640_c0_seq1 170 172 +
Chr2	stalkie_big_nohaplotig	exon	51959594	51959597	100	-	.	Parent=comp136640_c0_seq1.mrna1;Target=comp136640_c0_seq1 166 169 +
Chr2	stalkie_big_nohaplotig	exon	51975769	51975770	100	-	.	Parent=comp136640_c0_seq1.mrna1;Target=comp136640_c0_seq1 164 165 +
Chr2	stalkie_big_nohaplotig	exon	51982270	51982271	100	-	.	Parent=comp136640_c0_seq1.mrna1;Target=comp136640_c0_seq1 162 163 +
Chr2	stalkie_big_nohaplotig	exon	51989099	51989101	100	-	.	Parent=comp136640_c0_seq1.mrna1;Target=comp136640_c0_seq1 159 161 +
Chr2	stalkie_big_nohaplotig	exon	51994381	51994382	100	-	.	Parent=comp136640_c0_seq1.mrna1;Target=comp136640_c0_seq1 157 158 +
Chr2	stalkie_big_nohaplotig	exon	52016988	52016993	100	-	.	Parent=comp136640_c0_seq1.mrna1;Target=comp136640_c0_seq1 151 156 +
Chr2	stalkie_big_nohaplotig	exon	52020694	52020698	100	-	.	Parent=comp136640_c0_seq1.mrna1;Target=comp136640_c0_seq1 146 150 +
Chr2	stalkie_big_nohaplotig	CDS	51766615	51766728	.	-	0	Parent=comp136640_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52019425	52021232	.	-	.	ID=FBgn0038734.2.mrna1;geneID=FBgn0038734.2.path1;Name=FBgn0038734.2;Dir=sensecoverage=100.0;identity=99.6;matches=1620;mismatches=6;indels=0;unknowns=0;locus=RLOC_00017324
Chr2	stalkie_big_nohaplotig	exon	52019425	52020367	99	-	.	Parent=FBgn0038734.2.mrna1;Target=FBgn0038734.2 684 1626 +
Chr2	stalkie_big_nohaplotig	exon	52020429	52020545	100	-	.	Parent=FBgn0038734.2.mrna1;Target=FBgn0038734.2 567 683 +
Chr2	stalkie_big_nohaplotig	exon	52020610	52020796	99	-	.	Parent=FBgn0038734.2.mrna1;Target=FBgn0038734.2 380 566 +
Chr2	stalkie_big_nohaplotig	exon	52020854	52021232	99	-	.	Parent=FBgn0038734.2.mrna1;Target=FBgn0038734.2 1 379 +
Chr2	stalkie_big_nohaplotig	CDS	52019425	52020367	.	-	1	Parent=FBgn0038734.2.mrna1;Target=FBgn0038734.2 684 1626 +
Chr2	stalkie_big_nohaplotig	CDS	52020429	52020545	.	-	1	Parent=FBgn0038734.2.mrna1;Target=FBgn0038734.2 567 683 +
Chr2	stalkie_big_nohaplotig	CDS	52020610	52020796	.	-	2	Parent=FBgn0038734.2.mrna1;Target=FBgn0038734.2 380 566 +
Chr2	stalkie_big_nohaplotig	CDS	52020854	52021232	.	-	0	Parent=FBgn0038734.2.mrna1;Target=FBgn0038734.2 1 379 +
Chr2	gffcl	locus	51814139	51814837	.	+	.	ID=RLOC_00017325;geneIDs=Dv_FBgn0209813.1.path7;transcripts=Dv_FBgn0209813.1.mrna7
Chr2	stalkie_big_nohaplotig	mRNA	51814139	51814837	.	+	.	ID=Dv_FBgn0209813.1.mrna7;geneID=Dv_FBgn0209813.1.path7;Name=Dv_FBgn0209813.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=696;mismatches=3;indels=0;unknowns=0;Target=Dv_FBgn0209813.1 699 1 .;locus=RLOC_00017325
Chr2	stalkie_big_nohaplotig	exon	51814139	51814837	99	+	.	Parent=Dv_FBgn0209813.1.mrna7
Chr2	stalkie_big_nohaplotig	CDS	51814139	51814837	.	+	0	Parent=Dv_FBgn0209813.1.mrna7
Chr2	gffcl	locus	51834413	51836163	.	+	.	ID=RLOC_00017326;geneIDs=FBgn0034109.1.path1;transcripts=FBgn0034109.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51834413	51836163	.	+	.	ID=FBgn0034109.1.mrna1;geneID=FBgn0034109.1.path1;Name=FBgn0034109.1;Dir=sensecoverage=100.0;identity=99.0;matches=1560;mismatches=15;indels=0;unknowns=0;locus=RLOC_00017326
Chr2	stalkie_big_nohaplotig	exon	51834413	51834456	100	+	.	Parent=FBgn0034109.1.mrna1;Target=FBgn0034109.1 1 44 +
Chr2	stalkie_big_nohaplotig	exon	51834512	51835463	99	+	.	Parent=FBgn0034109.1.mrna1;Target=FBgn0034109.1 45 996 +
Chr2	stalkie_big_nohaplotig	exon	51835520	51835671	97	+	.	Parent=FBgn0034109.1.mrna1;Target=FBgn0034109.1 997 1148 +
Chr2	stalkie_big_nohaplotig	exon	51835737	51836163	99	+	.	Parent=FBgn0034109.1.mrna1;Target=FBgn0034109.1 1149 1575 +
Chr2	stalkie_big_nohaplotig	CDS	51834413	51834456	.	+	0	Parent=FBgn0034109.1.mrna1;Target=FBgn0034109.1 1 44 +
Chr2	stalkie_big_nohaplotig	CDS	51834512	51835463	.	+	1	Parent=FBgn0034109.1.mrna1;Target=FBgn0034109.1 45 996 +
Chr2	stalkie_big_nohaplotig	CDS	51835520	51835671	.	+	0	Parent=FBgn0034109.1.mrna1;Target=FBgn0034109.1 997 1148 +
Chr2	stalkie_big_nohaplotig	CDS	51835737	51836163	.	+	1	Parent=FBgn0034109.1.mrna1;Target=FBgn0034109.1 1149 1575 +
Chr2	gffcl	locus	51836269	51836836	.	-	.	ID=RLOC_00017327;geneIDs=FBgn0050100.1.path1;transcripts=FBgn0050100.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51836269	51836836	.	-	.	ID=FBgn0050100.1.mrna1;geneID=FBgn0050100.1.path1;Name=FBgn0050100.1;Dir=sensecoverage=100.0;identity=99.2;matches=512;mismatches=3;indels=1;unknowns=0;locus=RLOC_00017327
Chr2	stalkie_big_nohaplotig	exon	51836269	51836770	99	-	.	Parent=FBgn0050100.1.mrna1;Target=FBgn0050100.1 14 516 +
Chr2	stalkie_big_nohaplotig	exon	51836824	51836836	100	-	.	Parent=FBgn0050100.1.mrna1;Target=FBgn0050100.1 1 13 +
Chr2	stalkie_big_nohaplotig	CDS	51836269	51836770	.	-	2	Parent=FBgn0050100.1.mrna1;Target=FBgn0050100.1 14 516 +
Chr2	stalkie_big_nohaplotig	CDS	51836824	51836836	.	-	0	Parent=FBgn0050100.1.mrna1;Target=FBgn0050100.1 1 13 +
Chr2	gffcl	locus	51928391	51929032	.	+	.	ID=RLOC_00017328;geneIDs=comp152514_c0_seq1.path1;transcripts=comp152514_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51928391	51929032	.	+	.	ID=comp152514_c0_seq1.mrna1;geneID=comp152514_c0_seq1.path1;Name=comp152514_c0_seq1;Dir=sensecoverage=90.4;identity=98.6;matches=582;mismatches=7;indels=1;unknowns=0;locus=RLOC_00017328
Chr2	stalkie_big_nohaplotig	exon	51928391	51928553	96	+	.	Parent=comp152514_c0_seq1.mrna1;Target=comp152514_c0_seq1 55 218 +
Chr2	stalkie_big_nohaplotig	exon	51928607	51929032	99	+	.	Parent=comp152514_c0_seq1.mrna1;Target=comp152514_c0_seq1 219 644 +
Chr2	stalkie_big_nohaplotig	CDS	51928542	51928553	.	+	0	Parent=comp152514_c0_seq1.mrna1;Target=comp152514_c0_seq1 207 218 +
Chr2	stalkie_big_nohaplotig	CDS	51928607	51928891	.	+	0	Parent=comp152514_c0_seq1.mrna1;Target=comp152514_c0_seq1 219 503 +
Chr2	gffcl	locus	51942389	51943673	.	-	.	ID=RLOC_00017329;geneIDs=comp162529_c0_seq1.path1;transcripts=comp162529_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	51942389	51943673	.	-	.	ID=comp162529_c0_seq1.mrna1;geneID=comp162529_c0_seq1.path1;Name=comp162529_c0_seq1;Dir=sensecoverage=99.0;identity=93.6;matches=970;mismatches=32;indels=34;unknowns=0;locus=RLOC_00017329
Chr2	stalkie_big_nohaplotig	exon	51942389	51942612	99	-	.	Parent=comp162529_c0_seq1.mrna1;Target=comp162529_c0_seq1 814 1037 +
Chr2	stalkie_big_nohaplotig	exon	51942677	51943070	86	-	.	Parent=comp162529_c0_seq1.mrna1;Target=comp162529_c0_seq1 404 813 +
Chr2	stalkie_big_nohaplotig	exon	51943168	51943368	98	-	.	Parent=comp162529_c0_seq1.mrna1;Target=comp162529_c0_seq1 203 403 +
Chr2	stalkie_big_nohaplotig	exon	51943422	51943476	100	-	.	Parent=comp162529_c0_seq1.mrna1;Target=comp162529_c0_seq1 148 202 +
Chr2	stalkie_big_nohaplotig	exon	51943540	51943673	95	-	.	Parent=comp162529_c0_seq1.mrna1;Target=comp162529_c0_seq1 8 147 +
Chr2	stalkie_big_nohaplotig	CDS	51943225	51943368	.	-	0	Parent=comp162529_c0_seq1.mrna1;Target=comp162529_c0_seq1 203 346 +
Chr2	stalkie_big_nohaplotig	CDS	51943422	51943476	.	-	1	Parent=comp162529_c0_seq1.mrna1;Target=comp162529_c0_seq1 148 202 +
Chr2	stalkie_big_nohaplotig	CDS	51943540	51943673	.	-	0	Parent=comp162529_c0_seq1.mrna1;Target=comp162529_c0_seq1 8 147 +
Chr2	gffcl	locus	52040653	52041108	.	-	.	ID=RLOC_00017330;geneIDs=comp151451_c0_seq1.path1;transcripts=comp151451_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52040653	52041108	.	-	.	ID=comp151451_c0_seq1.mrna1;geneID=comp151451_c0_seq1.path1;Name=comp151451_c0_seq1;Dir=indeterminatecoverage=100.0;identity=88.9;matches=409;mismatches=47;indels=4;unknowns=0;Target=comp151451_c0_seq1 460 1 .;CDS_Target=comp151451_c0_seq1 112 107 .;locus=RLOC_00017330
Chr2	stalkie_big_nohaplotig	exon	52040653	52041108	88	-	.	Parent=comp151451_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	52040998	52041003	.	-	0	Parent=comp151451_c0_seq1.mrna1
Chr2	gffcl	locus	52080301	52082228	.	-	.	ID=RLOC_00017331;geneIDs=comp131377_c1_seq1.path1;transcripts=comp131377_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52080301	52082228	.	-	.	ID=comp131377_c1_seq1.mrna1;geneID=comp131377_c1_seq1.path1;Name=comp131377_c1_seq1;Dir=indeterminatecoverage=99.8;identity=96.5;matches=641;mismatches=8;indels=15;unknowns=0;Target=comp131377_c1_seq1 201 1 .;locus=RLOC_00017331
Chr2	stalkie_big_nohaplotig	exon	52080301	52080429	96	-	.	Parent=comp131377_c1_seq1.mrna1;Target=comp131377_c1_seq1 664 536 .
Chr2	stalkie_big_nohaplotig	exon	52081709	52082228	96	-	.	Parent=comp131377_c1_seq1.mrna1;Target=comp131377_c1_seq1 535 1 .
Chr2	stalkie_big_nohaplotig	CDS	52082028	52082228	.	-	0	Parent=comp131377_c1_seq1.mrna1
Chr2	gffcl	locus	52136434	52136618	.	+	.	ID=RLOC_00017332;geneIDs=comp99064_c0_seq1.path1;transcripts=comp99064_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52136434	52136618	.	+	.	ID=comp99064_c0_seq1.mrna1;geneID=comp99064_c0_seq1.path1;Name=comp99064_c0_seq1;Dir=indeterminatecoverage=90.7;identity=99.5;matches=184;mismatches=1;indels=0;unknowns=0;Target=comp99064_c0_seq1 204 20 .;CDS_Target=comp99064_c0_seq1 147 22 .;locus=RLOC_00017332
Chr2	stalkie_big_nohaplotig	exon	52136434	52136618	99	+	.	Parent=comp99064_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	52136436	52136561	.	+	0	Parent=comp99064_c0_seq1.mrna1
Chr2	gffcl	locus	52147711	52157677	.	+	.	ID=RLOC_00017333;geneIDs=FBgn0259742.1.path1;transcripts=FBgn0259742.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52147711	52157677	.	+	.	ID=FBgn0259742.1.mrna1;geneID=FBgn0259742.1.path1;Name=FBgn0259742.1;Dir=sensecoverage=100.0;identity=99.5;matches=1594;mismatches=8;indels=0;unknowns=0;locus=RLOC_00017333
Chr2	stalkie_big_nohaplotig	exon	52147711	52147941	99	+	.	Parent=FBgn0259742.1.mrna1;Target=FBgn0259742.1 1 231 +
Chr2	stalkie_big_nohaplotig	exon	52153084	52153167	100	+	.	Parent=FBgn0259742.1.mrna1;Target=FBgn0259742.1 232 315 +
Chr2	stalkie_big_nohaplotig	exon	52154541	52155221	98	+	.	Parent=FBgn0259742.1.mrna1;Target=FBgn0259742.1 316 996 +
Chr2	stalkie_big_nohaplotig	exon	52155274	52155449	100	+	.	Parent=FBgn0259742.1.mrna1;Target=FBgn0259742.1 997 1172 +
Chr2	stalkie_big_nohaplotig	exon	52157186	52157407	100	+	.	Parent=FBgn0259742.1.mrna1;Target=FBgn0259742.1 1173 1394 +
Chr2	stalkie_big_nohaplotig	exon	52157470	52157677	100	+	.	Parent=FBgn0259742.1.mrna1;Target=FBgn0259742.1 1395 1602 +
Chr2	stalkie_big_nohaplotig	CDS	52147711	52147941	.	+	0	Parent=FBgn0259742.1.mrna1;Target=FBgn0259742.1 1 231 +
Chr2	stalkie_big_nohaplotig	CDS	52153084	52153167	.	+	0	Parent=FBgn0259742.1.mrna1;Target=FBgn0259742.1 232 315 +
Chr2	stalkie_big_nohaplotig	CDS	52154541	52155221	.	+	0	Parent=FBgn0259742.1.mrna1;Target=FBgn0259742.1 316 996 +
Chr2	stalkie_big_nohaplotig	CDS	52155274	52155449	.	+	0	Parent=FBgn0259742.1.mrna1;Target=FBgn0259742.1 997 1172 +
Chr2	stalkie_big_nohaplotig	CDS	52157186	52157407	.	+	1	Parent=FBgn0259742.1.mrna1;Target=FBgn0259742.1 1173 1394 +
Chr2	stalkie_big_nohaplotig	CDS	52157470	52157677	.	+	1	Parent=FBgn0259742.1.mrna1;Target=FBgn0259742.1 1395 1602 +
Chr2	gffcl	locus	52149883	52152420	.	+	.	ID=RLOC_00017334;geneIDs=FBgn0259707.1.path1;transcripts=FBgn0259707.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52149883	52152420	.	+	.	ID=FBgn0259707.1.mrna1;geneID=FBgn0259707.1.path1;Name=FBgn0259707.1;Dir=sensecoverage=100.0;identity=99.5;matches=615;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017334
Chr2	stalkie_big_nohaplotig	exon	52149883	52150173	98	+	.	Parent=FBgn0259707.1.mrna1;Target=FBgn0259707.1 1 291 +
Chr2	stalkie_big_nohaplotig	exon	52150231	52150349	100	+	.	Parent=FBgn0259707.1.mrna1;Target=FBgn0259707.1 292 410 +
Chr2	stalkie_big_nohaplotig	exon	52152136	52152229	100	+	.	Parent=FBgn0259707.1.mrna1;Target=FBgn0259707.1 411 504 +
Chr2	stalkie_big_nohaplotig	exon	52152307	52152420	100	+	.	Parent=FBgn0259707.1.mrna1;Target=FBgn0259707.1 505 618 +
Chr2	stalkie_big_nohaplotig	CDS	52149883	52150173	.	+	0	Parent=FBgn0259707.1.mrna1;Target=FBgn0259707.1 1 291 +
Chr2	stalkie_big_nohaplotig	CDS	52150231	52150349	.	+	0	Parent=FBgn0259707.1.mrna1;Target=FBgn0259707.1 292 410 +
Chr2	stalkie_big_nohaplotig	CDS	52152136	52152229	.	+	1	Parent=FBgn0259707.1.mrna1;Target=FBgn0259707.1 411 504 +
Chr2	stalkie_big_nohaplotig	CDS	52152307	52152420	.	+	0	Parent=FBgn0259707.1.mrna1;Target=FBgn0259707.1 505 618 +
Chr2	gffcl	locus	52157944	52158744	.	-	.	ID=RLOC_00017335;geneIDs=comp150872_c0_seq1.path1;transcripts=comp150872_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52157944	52158744	.	-	.	ID=comp150872_c0_seq1.mrna1;geneID=comp150872_c0_seq1.path1;Name=comp150872_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.6;matches=795;mismatches=6;indels=5;unknowns=0;Target=comp150872_c0_seq1 809 4 .;CDS_Target=comp150872_c0_seq1 807 724 .;locus=RLOC_00017335
Chr2	stalkie_big_nohaplotig	exon	52157944	52158744	98	-	.	Parent=comp150872_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	52157946	52158029	.	-	0	Parent=comp150872_c0_seq1.mrna1
Chr2	gffcl	locus	52160367	52160746	.	-	.	ID=RLOC_00017336;geneIDs=comp147755_c0_seq1.path1;transcripts=comp147755_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52160367	52160746	.	-	.	ID=comp147755_c0_seq1.mrna1;geneID=comp147755_c0_seq1.path1;Name=comp147755_c0_seq1;Dir=indeterminatecoverage=97.4;identity=97.9;matches=372;mismatches=8;indels=0;unknowns=0;Target=comp147755_c0_seq1 382 3 .;CDS_Target=comp147755_c0_seq1 75 31 .;locus=RLOC_00017336
Chr2	stalkie_big_nohaplotig	exon	52160367	52160746	97	-	.	Parent=comp147755_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	52160674	52160718	.	-	0	Parent=comp147755_c0_seq1.mrna1
Chr2	gffcl	locus	52161343	52161506	.	+	.	ID=RLOC_00017337;geneIDs=comp158691_c2_seq1.path1;transcripts=comp158691_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52161343	52161506	.	+	.	ID=comp158691_c2_seq1.mrna1;geneID=comp158691_c2_seq1.path1;Name=comp158691_c2_seq1;Dir=indeterminatecoverage=8.8;identity=97.6;matches=160;mismatches=4;indels=0;unknowns=0;Target=comp158691_c2_seq1 165 2 .;locus=RLOC_00017337
Chr2	stalkie_big_nohaplotig	exon	52161343	52161506	97	+	.	Parent=comp158691_c2_seq1.mrna1
Chr2	gffcl	locus	52164076	52179706	.	-	.	ID=RLOC_00017338;geneIDs=comp153196_c0_seq1.path1;transcripts=comp153196_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52164076	52179706	.	-	.	ID=comp153196_c0_seq1.mrna1;geneID=comp153196_c0_seq1.path1;Name=comp153196_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=981;mismatches=1;indels=4;unknowns=0;locus=RLOC_00017338
Chr2	stalkie_big_nohaplotig	exon	52164076	52164561	98	-	.	Parent=comp153196_c0_seq1.mrna1;Target=comp153196_c0_seq1 499 984 +
Chr2	stalkie_big_nohaplotig	exon	52179148	52179187	100	-	.	Parent=comp153196_c0_seq1.mrna1;Target=comp153196_c0_seq1 459 498 +
Chr2	stalkie_big_nohaplotig	exon	52179249	52179706	100	-	.	Parent=comp153196_c0_seq1.mrna1;Target=comp153196_c0_seq1 1 458 +
Chr2	stalkie_big_nohaplotig	CDS	52164254	52164561	.	-	2	Parent=comp153196_c0_seq1.mrna1;Target=comp153196_c0_seq1 499 806 +
Chr2	stalkie_big_nohaplotig	CDS	52179148	52179187	.	-	0	Parent=comp153196_c0_seq1.mrna1;Target=comp153196_c0_seq1 459 498 +
Chr2	stalkie_big_nohaplotig	CDS	52179249	52179536	.	-	0	Parent=comp153196_c0_seq1.mrna1;Target=comp153196_c0_seq1 171 458 +
Chr2	gffcl	locus	52168217	52700497	.	+	.	ID=RLOC_00017339;geneIDs=comp162765_c1_seq1.path1;transcripts=comp162765_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52168217	52700497	.	+	.	ID=comp162765_c1_seq1.mrna1;geneID=comp162765_c1_seq1.path1;Name=comp162765_c1_seq1;Dir=sensecoverage=86.3;identity=95.0;matches=1776;mismatches=74;indels=20;unknowns=0;locus=RLOC_00017339
Chr2	stalkie_big_nohaplotig	exon	52168217	52169342	94	+	.	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 3 1121 +
Chr2	stalkie_big_nohaplotig	exon	52169412	52170022	94	+	.	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 1122 1733 +
Chr2	stalkie_big_nohaplotig	exon	52594757	52594766	100	+	.	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 1734 1743 +
Chr2	stalkie_big_nohaplotig	exon	52610751	52610759	100	+	.	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 1744 1752 +
Chr2	stalkie_big_nohaplotig	exon	52612356	52612361	100	+	.	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 1753 1758 +
Chr2	stalkie_big_nohaplotig	exon	52614204	52614207	100	+	.	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 1759 1762 +
Chr2	stalkie_big_nohaplotig	exon	52614958	52614962	100	+	.	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 1763 1767 +
Chr2	stalkie_big_nohaplotig	exon	52618961	52618962	100	+	.	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 1768 1769 +
Chr2	stalkie_big_nohaplotig	exon	52621475	52621483	100	+	.	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 1770 1778 +
Chr2	stalkie_big_nohaplotig	exon	52626891	52626901	100	+	.	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 1779 1789 +
Chr2	stalkie_big_nohaplotig	exon	52657389	52657400	83	+	.	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 1790 1801 +
Chr2	stalkie_big_nohaplotig	exon	52667080	52667084	100	+	.	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 1802 1806 +
Chr2	stalkie_big_nohaplotig	exon	52681237	52681244	100	+	.	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 1807 1814 +
Chr2	stalkie_big_nohaplotig	exon	52687337	52687348	100	+	.	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 1815 1826 +
Chr2	stalkie_big_nohaplotig	exon	52688422	52688429	100	+	.	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 1827 1834 +
Chr2	stalkie_big_nohaplotig	exon	52691492	52691497	66	+	.	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 1835 1840 +
Chr2	stalkie_big_nohaplotig	exon	52691601	52691602	100	+	.	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 1841 1842 +
Chr2	stalkie_big_nohaplotig	exon	52696041	52696044	100	+	.	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 1843 1846 +
Chr2	stalkie_big_nohaplotig	exon	52696790	52696793	100	+	.	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 1847 1850 +
Chr2	stalkie_big_nohaplotig	exon	52699649	52699653	100	+	.	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 1851 1855 +
Chr2	stalkie_big_nohaplotig	exon	52700494	52700497	100	+	.	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 1856 1859 +
Chr2	stalkie_big_nohaplotig	CDS	52169239	52169342	.	+	0	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 1018 1121 +
Chr2	stalkie_big_nohaplotig	CDS	52169412	52169631	.	+	1	Parent=comp162765_c1_seq1.mrna1;Target=comp162765_c1_seq1 1122 1341 +
Chr2	gffcl	locus	52170644	52172253	.	+	.	ID=RLOC_00017340;geneIDs=FBgn0035039.1.path1;transcripts=FBgn0035039.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52170644	52172253	.	+	.	ID=FBgn0035039.1.mrna1;geneID=FBgn0035039.1.path1;Name=FBgn0035039.1;Dir=sensecoverage=100.0;identity=99.4;matches=1536;mismatches=9;indels=0;unknowns=0;locus=RLOC_00017340
Chr2	stalkie_big_nohaplotig	exon	52170644	52171849	99	+	.	Parent=FBgn0035039.1.mrna1;Target=FBgn0035039.1 1 1206 +
Chr2	stalkie_big_nohaplotig	exon	52171915	52172253	100	+	.	Parent=FBgn0035039.1.mrna1;Target=FBgn0035039.1 1207 1545 +
Chr2	stalkie_big_nohaplotig	CDS	52170644	52171849	.	+	0	Parent=FBgn0035039.1.mrna1;Target=FBgn0035039.1 1 1206 +
Chr2	stalkie_big_nohaplotig	CDS	52171915	52172253	.	+	0	Parent=FBgn0035039.1.mrna1;Target=FBgn0035039.1 1207 1545 +
Chr2	gffcl	locus	52186782	52189798	.	+	.	ID=RLOC_00017341;geneIDs=FBgn0050001.1.path1;transcripts=FBgn0050001.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52186782	52189798	.	+	.	ID=FBgn0050001.1.mrna1;geneID=FBgn0050001.1.path1;Name=FBgn0050001.1;Dir=sensecoverage=99.9;identity=99.6;matches=1033;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017341
Chr2	stalkie_big_nohaplotig	exon	52186782	52186899	100	+	.	Parent=FBgn0050001.1.mrna1;Target=FBgn0050001.1 2 119 +
Chr2	stalkie_big_nohaplotig	exon	52187449	52187543	100	+	.	Parent=FBgn0050001.1.mrna1;Target=FBgn0050001.1 120 214 +
Chr2	stalkie_big_nohaplotig	exon	52187624	52187752	100	+	.	Parent=FBgn0050001.1.mrna1;Target=FBgn0050001.1 215 343 +
Chr2	stalkie_big_nohaplotig	exon	52187809	52187957	100	+	.	Parent=FBgn0050001.1.mrna1;Target=FBgn0050001.1 344 492 +
Chr2	stalkie_big_nohaplotig	exon	52188021	52188165	97	+	.	Parent=FBgn0050001.1.mrna1;Target=FBgn0050001.1 493 637 +
Chr2	stalkie_big_nohaplotig	exon	52188230	52188480	99	+	.	Parent=FBgn0050001.1.mrna1;Target=FBgn0050001.1 638 888 +
Chr2	stalkie_big_nohaplotig	exon	52189649	52189798	100	+	.	Parent=FBgn0050001.1.mrna1;Target=FBgn0050001.1 889 1038 +
Chr2	stalkie_big_nohaplotig	CDS	52186784	52186899	.	+	0	Parent=FBgn0050001.1.mrna1;Target=FBgn0050001.1 4 119 +
Chr2	stalkie_big_nohaplotig	CDS	52187449	52187543	.	+	1	Parent=FBgn0050001.1.mrna1;Target=FBgn0050001.1 120 214 +
Chr2	stalkie_big_nohaplotig	CDS	52187624	52187752	.	+	2	Parent=FBgn0050001.1.mrna1;Target=FBgn0050001.1 215 343 +
Chr2	stalkie_big_nohaplotig	CDS	52187809	52187957	.	+	2	Parent=FBgn0050001.1.mrna1;Target=FBgn0050001.1 344 492 +
Chr2	stalkie_big_nohaplotig	CDS	52188021	52188165	.	+	0	Parent=FBgn0050001.1.mrna1;Target=FBgn0050001.1 493 637 +
Chr2	stalkie_big_nohaplotig	CDS	52188230	52188480	.	+	2	Parent=FBgn0050001.1.mrna1;Target=FBgn0050001.1 638 888 +
Chr2	stalkie_big_nohaplotig	CDS	52189649	52189798	.	+	0	Parent=FBgn0050001.1.mrna1;Target=FBgn0050001.1 889 1038 +
Chr2	gffcl	locus	52192672	52194369	.	-	.	ID=RLOC_00017342;geneIDs=ORF1678.path1;transcripts=ORF1678.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52192672	52194369	.	-	.	ID=ORF1678.mrna1;geneID=ORF1678.path1;Name=ORF1678;Dir=sensecoverage=100.0;identity=99.8;matches=1027;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017342
Chr2	stalkie_big_nohaplotig	exon	52192672	52193004	99	-	.	Parent=ORF1678.mrna1;Target=ORF1678 697 1029 +
Chr2	stalkie_big_nohaplotig	exon	52193065	52193151	100	-	.	Parent=ORF1678.mrna1;Target=ORF1678 610 696 +
Chr2	stalkie_big_nohaplotig	exon	52193761	52194369	100	-	.	Parent=ORF1678.mrna1;Target=ORF1678 1 609 +
Chr2	stalkie_big_nohaplotig	CDS	52192672	52193004	.	-	0	Parent=ORF1678.mrna1;Target=ORF1678 697 1029 +
Chr2	stalkie_big_nohaplotig	CDS	52193065	52193151	.	-	0	Parent=ORF1678.mrna1;Target=ORF1678 610 696 +
Chr2	stalkie_big_nohaplotig	CDS	52193761	52194369	.	-	0	Parent=ORF1678.mrna1;Target=ORF1678 1 609 +
Chr2	gffcl	locus	52198368	52199068	.	-	.	ID=RLOC_00017343;geneIDs=comp147012_c0_seq1.path1;transcripts=comp147012_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52198368	52199068	.	-	.	ID=comp147012_c0_seq1.mrna1;geneID=comp147012_c0_seq1.path1;Name=comp147012_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.0;matches=674;mismatches=27;indels=1;unknowns=0;Target=comp147012_c0_seq1 702 1 .;CDS_Target=comp147012_c0_seq1 401 261 .;locus=RLOC_00017343
Chr2	stalkie_big_nohaplotig	exon	52198368	52199068	96	-	.	Parent=comp147012_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	52198669	52198809	.	-	0	Parent=comp147012_c0_seq1.mrna1
Chr2	gffcl	locus	52199775	52203743	.	-	.	ID=RLOC_00017344;geneIDs=FBgn0034540.1.path1;transcripts=FBgn0034540.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52199775	52203743	.	-	.	ID=FBgn0034540.1.mrna1;geneID=FBgn0034540.1.path1;Name=FBgn0034540.1;Dir=sensecoverage=98.9;identity=99.6;matches=2419;mismatches=9;indels=0;unknowns=0;locus=RLOC_00017344
Chr2	stalkie_big_nohaplotig	exon	52199775	52200312	99	-	.	Parent=FBgn0034540.1.mrna1;Target=FBgn0034540.1 1917 2454 +
Chr2	stalkie_big_nohaplotig	exon	52200373	52200458	100	-	.	Parent=FBgn0034540.1.mrna1;Target=FBgn0034540.1 1831 1916 +
Chr2	stalkie_big_nohaplotig	exon	52200520	52200666	100	-	.	Parent=FBgn0034540.1.mrna1;Target=FBgn0034540.1 1684 1830 +
Chr2	stalkie_big_nohaplotig	exon	52201894	52202605	100	-	.	Parent=FBgn0034540.1.mrna1;Target=FBgn0034540.1 972 1683 +
Chr2	stalkie_big_nohaplotig	exon	52202683	52202968	99	-	.	Parent=FBgn0034540.1.mrna1;Target=FBgn0034540.1 686 971 +
Chr2	stalkie_big_nohaplotig	exon	52203029	52203224	98	-	.	Parent=FBgn0034540.1.mrna1;Target=FBgn0034540.1 490 685 +
Chr2	stalkie_big_nohaplotig	exon	52203281	52203743	98	-	.	Parent=FBgn0034540.1.mrna1;Target=FBgn0034540.1 27 489 +
Chr2	stalkie_big_nohaplotig	CDS	52199775	52200312	.	-	1	Parent=FBgn0034540.1.mrna1;Target=FBgn0034540.1 1917 2454 +
Chr2	stalkie_big_nohaplotig	CDS	52200373	52200458	.	-	0	Parent=FBgn0034540.1.mrna1;Target=FBgn0034540.1 1831 1916 +
Chr2	stalkie_big_nohaplotig	CDS	52200520	52200666	.	-	0	Parent=FBgn0034540.1.mrna1;Target=FBgn0034540.1 1684 1830 +
Chr2	stalkie_big_nohaplotig	CDS	52201894	52202605	.	-	1	Parent=FBgn0034540.1.mrna1;Target=FBgn0034540.1 972 1683 +
Chr2	stalkie_big_nohaplotig	CDS	52202683	52202968	.	-	2	Parent=FBgn0034540.1.mrna1;Target=FBgn0034540.1 686 971 +
Chr2	stalkie_big_nohaplotig	CDS	52203029	52203224	.	-	0	Parent=FBgn0034540.1.mrna1;Target=FBgn0034540.1 490 685 +
Chr2	stalkie_big_nohaplotig	CDS	52203281	52203742	.	-	0	Parent=FBgn0034540.1.mrna1;Target=FBgn0034540.1 28 489 +
Chr2	gffcl	locus	52212967	52217178	.	-	.	ID=RLOC_00017345;geneIDs=FBgn0034539.1.path1;transcripts=FBgn0034539.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52212967	52217178	.	-	.	ID=FBgn0034539.1.mrna1;geneID=FBgn0034539.1.path1;Name=FBgn0034539.1;Dir=sensecoverage=100.0;identity=100.0;matches=444;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017345
Chr2	stalkie_big_nohaplotig	exon	52212967	52213097	100	-	.	Parent=FBgn0034539.1.mrna1;Target=FBgn0034539.1 314 444 +
Chr2	stalkie_big_nohaplotig	exon	52213244	52213307	100	-	.	Parent=FBgn0034539.1.mrna1;Target=FBgn0034539.1 250 313 +
Chr2	stalkie_big_nohaplotig	exon	52213390	52213478	100	-	.	Parent=FBgn0034539.1.mrna1;Target=FBgn0034539.1 161 249 +
Chr2	stalkie_big_nohaplotig	exon	52217019	52217178	100	-	.	Parent=FBgn0034539.1.mrna1;Target=FBgn0034539.1 1 160 +
Chr2	stalkie_big_nohaplotig	CDS	52212967	52213097	.	-	2	Parent=FBgn0034539.1.mrna1;Target=FBgn0034539.1 314 444 +
Chr2	stalkie_big_nohaplotig	CDS	52213244	52213307	.	-	0	Parent=FBgn0034539.1.mrna1;Target=FBgn0034539.1 250 313 +
Chr2	stalkie_big_nohaplotig	CDS	52213390	52213478	.	-	2	Parent=FBgn0034539.1.mrna1;Target=FBgn0034539.1 161 249 +
Chr2	stalkie_big_nohaplotig	CDS	52217019	52217178	.	-	0	Parent=FBgn0034539.1.mrna1;Target=FBgn0034539.1 1 160 +
Chr2	gffcl	locus	52226208	52226815	.	+	.	ID=RLOC_00017346;geneIDs=FBgn0034538.1.path1;transcripts=FBgn0034538.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52226208	52226815	.	+	.	ID=FBgn0034538.1.mrna1;geneID=FBgn0034538.1.path1;Name=FBgn0034538.1;Dir=sensecoverage=97.3;identity=99.6;matches=459;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017346
Chr2	stalkie_big_nohaplotig	exon	52226208	52226358	98	+	.	Parent=FBgn0034538.1.mrna1;Target=FBgn0034538.1 1 151 +
Chr2	stalkie_big_nohaplotig	exon	52226423	52226575	100	+	.	Parent=FBgn0034538.1.mrna1;Target=FBgn0034538.1 152 304 +
Chr2	stalkie_big_nohaplotig	exon	52226659	52226815	100	+	.	Parent=FBgn0034538.1.mrna1;Target=FBgn0034538.1 305 461 +
Chr2	stalkie_big_nohaplotig	CDS	52226208	52226358	.	+	0	Parent=FBgn0034538.1.mrna1;Target=FBgn0034538.1 1 151 +
Chr2	stalkie_big_nohaplotig	CDS	52226423	52226575	.	+	2	Parent=FBgn0034538.1.mrna1;Target=FBgn0034538.1 152 304 +
Chr2	stalkie_big_nohaplotig	CDS	52226659	52226813	.	+	2	Parent=FBgn0034538.1.mrna1;Target=FBgn0034538.1 305 459 +
Chr2	gffcl	locus	52240062	52240916	.	-	.	ID=RLOC_00017347;geneIDs=comp152428_c0_seq1.path1;transcripts=comp152428_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52240062	52240916	.	-	.	ID=comp152428_c0_seq1.mrna1;geneID=comp152428_c0_seq1.path1;Name=comp152428_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=845;mismatches=10;indels=0;unknowns=0;Target=comp152428_c0_seq1 855 1 .;CDS_Target=comp152428_c0_seq1 734 633 .;locus=RLOC_00017347
Chr2	stalkie_big_nohaplotig	exon	52240062	52240916	98	-	.	Parent=comp152428_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	52240183	52240284	.	-	0	Parent=comp152428_c0_seq1.mrna1
Chr2	gffcl	locus	52260858	52261398	.	+	.	ID=RLOC_00017348;geneIDs=comp146929_c0_seq1.path1;transcripts=comp146929_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52260858	52261398	.	+	.	ID=comp146929_c0_seq1.mrna1;geneID=comp146929_c0_seq1.path1;Name=comp146929_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=539;mismatches=0;indels=2;unknowns=0;Target=comp146929_c0_seq1 539 1 .;CDS_Target=comp146929_c0_seq1 459 373 .;locus=RLOC_00017348
Chr2	stalkie_big_nohaplotig	exon	52260858	52261398	99	+	.	Parent=comp146929_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	52261230	52261316	.	+	0	Parent=comp146929_c0_seq1.mrna1
Chr2	gffcl	locus	52269935	52270849	.	+	.	ID=RLOC_00017349;geneIDs=comp154302_c0_seq1.path1;transcripts=comp154302_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52269935	52270849	.	+	.	ID=comp154302_c0_seq1.mrna1;geneID=comp154302_c0_seq1.path1;Name=comp154302_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=912;mismatches=3;indels=0;unknowns=0;Target=comp154302_c0_seq1 915 1 .;CDS_Target=comp154302_c0_seq1 96 1 .;locus=RLOC_00017349
Chr2	stalkie_big_nohaplotig	exon	52269935	52270849	99	+	.	Parent=comp154302_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	52269935	52270030	.	+	0	Parent=comp154302_c0_seq1.mrna1
Chr2	gffcl	locus	52337435	52339226	.	-	.	ID=RLOC_00017350;geneIDs=FBgn0034537.1.path1;transcripts=FBgn0034537.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52337435	52339226	.	-	.	ID=FBgn0034537.1.mrna1;geneID=FBgn0034537.1.path1;Name=FBgn0034537.1;Dir=sensecoverage=100.0;identity=100.0;matches=1353;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017350
Chr2	stalkie_big_nohaplotig	exon	52337435	52337524	100	-	.	Parent=FBgn0034537.1.mrna1;Target=FBgn0034537.1 1264 1353 +
Chr2	stalkie_big_nohaplotig	exon	52337579	52337733	100	-	.	Parent=FBgn0034537.1.mrna1;Target=FBgn0034537.1 1109 1263 +
Chr2	stalkie_big_nohaplotig	exon	52337793	52338048	100	-	.	Parent=FBgn0034537.1.mrna1;Target=FBgn0034537.1 853 1108 +
Chr2	stalkie_big_nohaplotig	exon	52338155	52338485	100	-	.	Parent=FBgn0034537.1.mrna1;Target=FBgn0034537.1 522 852 +
Chr2	stalkie_big_nohaplotig	exon	52338564	52338846	100	-	.	Parent=FBgn0034537.1.mrna1;Target=FBgn0034537.1 239 521 +
Chr2	stalkie_big_nohaplotig	exon	52338922	52339025	100	-	.	Parent=FBgn0034537.1.mrna1;Target=FBgn0034537.1 135 238 +
Chr2	stalkie_big_nohaplotig	exon	52339093	52339226	100	-	.	Parent=FBgn0034537.1.mrna1;Target=FBgn0034537.1 1 134 +
Chr2	stalkie_big_nohaplotig	CDS	52337435	52337524	.	-	0	Parent=FBgn0034537.1.mrna1;Target=FBgn0034537.1 1264 1353 +
Chr2	stalkie_big_nohaplotig	CDS	52337579	52337733	.	-	2	Parent=FBgn0034537.1.mrna1;Target=FBgn0034537.1 1109 1263 +
Chr2	stalkie_big_nohaplotig	CDS	52337793	52338048	.	-	0	Parent=FBgn0034537.1.mrna1;Target=FBgn0034537.1 853 1108 +
Chr2	stalkie_big_nohaplotig	CDS	52338155	52338485	.	-	1	Parent=FBgn0034537.1.mrna1;Target=FBgn0034537.1 522 852 +
Chr2	stalkie_big_nohaplotig	CDS	52338564	52338846	.	-	2	Parent=FBgn0034537.1.mrna1;Target=FBgn0034537.1 239 521 +
Chr2	stalkie_big_nohaplotig	CDS	52338922	52339025	.	-	1	Parent=FBgn0034537.1.mrna1;Target=FBgn0034537.1 135 238 +
Chr2	stalkie_big_nohaplotig	CDS	52339093	52339226	.	-	0	Parent=FBgn0034537.1.mrna1;Target=FBgn0034537.1 1 134 +
Chr2	gffcl	locus	52343178	52345859	.	+	.	ID=RLOC_00017351;geneIDs=FBgn0040780.1.path1;transcripts=FBgn0040780.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52343178	52345859	.	+	.	ID=FBgn0040780.1.mrna1;geneID=FBgn0040780.1.path1;Name=FBgn0040780.1;Dir=sensecoverage=100.0;identity=94.4;matches=714;mismatches=9;indels=33;unknowns=0;locus=RLOC_00017351
Chr2	stalkie_big_nohaplotig	exon	52343178	52343312	100	+	.	Parent=FBgn0040780.1.mrna1;Target=FBgn0040780.1 1 135 +
Chr2	stalkie_big_nohaplotig	exon	52345121	52345472	88	+	.	Parent=FBgn0040780.1.mrna1;Target=FBgn0040780.1 136 454 +
Chr2	stalkie_big_nohaplotig	exon	52345591	52345859	99	+	.	Parent=FBgn0040780.1.mrna1;Target=FBgn0040780.1 455 723 +
Chr2	stalkie_big_nohaplotig	CDS	52343178	52343312	.	+	0	Parent=FBgn0040780.1.mrna1;Target=FBgn0040780.1 1 135 +
Chr2	stalkie_big_nohaplotig	CDS	52345121	52345472	.	+	0	Parent=FBgn0040780.1.mrna1;Target=FBgn0040780.1 136 454 +
Chr2	stalkie_big_nohaplotig	CDS	52345591	52345859	.	+	2	Parent=FBgn0040780.1.mrna1;Target=FBgn0040780.1 455 723 +
Chr2	gffcl	locus	52435752	52436505	.	-	.	ID=RLOC_00017352;geneIDs=comp162646_c0_seq1.path1;transcripts=comp162646_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52435752	52436505	.	-	.	ID=comp162646_c0_seq1.mrna1;geneID=comp162646_c0_seq1.path1;Name=comp162646_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.0;matches=725;mismatches=29;indels=43;unknowns=0;Target=comp162646_c0_seq1 797 1 .;CDS_Target=comp162646_c0_seq1 114 52 .;locus=RLOC_00017352
Chr2	stalkie_big_nohaplotig	exon	52435752	52436505	90	-	.	Parent=comp162646_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	52436392	52436454	.	-	0	Parent=comp162646_c0_seq1.mrna1
Chr2	gffcl	locus	52436592	52436943	.	-	.	ID=RLOC_00017353;geneIDs=comp146409_c0_seq1.path1;transcripts=comp146409_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52436592	52436943	.	-	.	ID=comp146409_c0_seq1.mrna1;geneID=comp146409_c0_seq1.path1;Name=comp146409_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=350;mismatches=2;indels=0;unknowns=0;Target=comp146409_c0_seq1 352 1 .;CDS_Target=comp146409_c0_seq1 164 96 .;locus=RLOC_00017353
Chr2	stalkie_big_nohaplotig	exon	52436592	52436943	99	-	.	Parent=comp146409_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	52436780	52436848	.	-	0	Parent=comp146409_c0_seq1.mrna1
Chr2	gffcl	locus	52437354	52438849	.	-	.	ID=RLOC_00017354;geneIDs=comp151840_c0_seq1.path1;transcripts=comp151840_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52437354	52438849	.	-	.	ID=comp151840_c0_seq1.mrna1;geneID=comp151840_c0_seq1.path1;Name=comp151840_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.9;matches=1438;mismatches=36;indels=57;unknowns=0;Target=comp151840_c0_seq1 1509 1 .;CDS_Target=comp151840_c0_seq1 307 224 .;locus=RLOC_00017354
Chr2	stalkie_big_nohaplotig	exon	52437354	52438849	93	-	.	Parent=comp151840_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	52438543	52438626	.	-	0	Parent=comp151840_c0_seq1.mrna1
Chr2	gffcl	locus	52503900	52504784	.	+	.	ID=RLOC_00017355;geneIDs=Dv_FBgn0206941.2.path7;transcripts=Dv_FBgn0206941.2.mrna7
Chr2	stalkie_big_nohaplotig	mRNA	52503900	52504784	.	+	.	ID=Dv_FBgn0206941.2.mrna7;geneID=Dv_FBgn0206941.2.path7;Name=Dv_FBgn0206941.2;Dir=indeterminatecoverage=100.0;identity=99.7;matches=882;mismatches=3;indels=0;unknowns=0;Target=Dv_FBgn0206941.2 885 1 .;locus=RLOC_00017355
Chr2	stalkie_big_nohaplotig	exon	52503900	52504784	99	+	.	Parent=Dv_FBgn0206941.2.mrna7
Chr2	stalkie_big_nohaplotig	CDS	52503900	52504784	.	+	0	Parent=Dv_FBgn0206941.2.mrna7
Chr2	gffcl	locus	52531104	52531544	.	-	.	ID=RLOC_00017356;geneIDs=comp117819_c1_seq1.path1;transcripts=comp117819_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52531104	52531544	.	-	.	ID=comp117819_c1_seq1.mrna1;geneID=comp117819_c1_seq1.path1;Name=comp117819_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=441;mismatches=0;indels=0;unknowns=0;Target=comp117819_c1_seq1 441 1 .;CDS_Target=comp117819_c1_seq1 248 48 .;locus=RLOC_00017356
Chr2	stalkie_big_nohaplotig	exon	52531104	52531544	100	-	.	Parent=comp117819_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	52531297	52531497	.	-	0	Parent=comp117819_c1_seq1.mrna1
Chr2	gffcl	locus	52545660	52546149	.	+	.	ID=RLOC_00017357;geneIDs=comp154613_c0_seq1.path1;transcripts=comp154613_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52545660	52546149	.	+	.	ID=comp154613_c0_seq1.mrna1;geneID=comp154613_c0_seq1.path1;Name=comp154613_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=479;mismatches=11;indels=0;unknowns=0;Target=comp154613_c0_seq1 490 1 .;CDS_Target=comp154613_c0_seq1 227 84 .;locus=RLOC_00017357
Chr2	stalkie_big_nohaplotig	exon	52545660	52546149	97	+	.	Parent=comp154613_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	52545743	52545886	.	+	0	Parent=comp154613_c0_seq1.mrna1
Chr2	gffcl	locus	52592852	52598728	.	.	.	ID=RLOC_00017358;geneIDs=comp78352_c1_seq1.path1,comp136809_c0_seq1.path1;transcripts=comp78352_c1_seq1.mrna1,comp136809_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52592852	52598721	.	-	.	ID=comp78352_c1_seq1.mrna1;geneID=comp78352_c1_seq1.path1;Name=comp78352_c1_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=627;mismatches=0;indels=0;unknowns=0;Target=comp78352_c1_seq1 369 464 +;locus=RLOC_00017358
Chr2	stalkie_big_nohaplotig	exon	52592852	52593010	100	-	.	Parent=comp78352_c1_seq1.mrna1;Target=comp78352_c1_seq1 469 627 +
Chr2	stalkie_big_nohaplotig	exon	52597267	52597648	100	-	.	Parent=comp78352_c1_seq1.mrna1;Target=comp78352_c1_seq1 87 468 +
Chr2	stalkie_big_nohaplotig	exon	52597706	52597767	100	-	.	Parent=comp78352_c1_seq1.mrna1;Target=comp78352_c1_seq1 25 86 +
Chr2	stalkie_big_nohaplotig	exon	52598698	52598721	100	-	.	Parent=comp78352_c1_seq1.mrna1;Target=comp78352_c1_seq1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	52597271	52597366	.	-	0	Parent=comp78352_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52598132	52598728	.	+	.	ID=comp136809_c0_seq1.mrna1;geneID=comp136809_c0_seq1.path1;Name=comp136809_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.5;matches=594;mismatches=3;indels=0;unknowns=0;Target=comp136809_c0_seq1 598 2 .;CDS_Target=comp136809_c0_seq1 175 2 .;locus=RLOC_00017358
Chr2	stalkie_big_nohaplotig	exon	52598132	52598728	99	+	.	Parent=comp136809_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	52598132	52598305	.	+	0	Parent=comp136809_c0_seq1.mrna1
Chr2	gffcl	locus	52620837	52623056	.	+	.	ID=RLOC_00017359;geneIDs=FBgn0031689.1.path1;transcripts=FBgn0031689.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52620837	52623056	.	+	.	ID=FBgn0031689.1.mrna1;geneID=FBgn0031689.1.path1;Name=FBgn0031689.1;Dir=sensecoverage=100.0;identity=99.7;matches=1538;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017359
Chr2	stalkie_big_nohaplotig	exon	52620837	52621069	100	+	.	Parent=FBgn0031689.1.mrna1;Target=FBgn0031689.1 1 233 +
Chr2	stalkie_big_nohaplotig	exon	52621139	52621277	100	+	.	Parent=FBgn0031689.1.mrna1;Target=FBgn0031689.1 234 372 +
Chr2	stalkie_big_nohaplotig	exon	52621358	52621465	100	+	.	Parent=FBgn0031689.1.mrna1;Target=FBgn0031689.1 373 480 +
Chr2	stalkie_big_nohaplotig	exon	52621731	52621835	100	+	.	Parent=FBgn0031689.1.mrna1;Target=FBgn0031689.1 481 585 +
Chr2	stalkie_big_nohaplotig	exon	52621899	52622312	100	+	.	Parent=FBgn0031689.1.mrna1;Target=FBgn0031689.1 586 999 +
Chr2	stalkie_big_nohaplotig	exon	52622374	52622482	99	+	.	Parent=FBgn0031689.1.mrna1;Target=FBgn0031689.1 1000 1108 +
Chr2	stalkie_big_nohaplotig	exon	52622559	52622828	99	+	.	Parent=FBgn0031689.1.mrna1;Target=FBgn0031689.1 1109 1378 +
Chr2	stalkie_big_nohaplotig	exon	52622893	52623056	99	+	.	Parent=FBgn0031689.1.mrna1;Target=FBgn0031689.1 1379 1542 +
Chr2	stalkie_big_nohaplotig	CDS	52620837	52621069	.	+	0	Parent=FBgn0031689.1.mrna1;Target=FBgn0031689.1 1 233 +
Chr2	stalkie_big_nohaplotig	CDS	52621139	52621277	.	+	1	Parent=FBgn0031689.1.mrna1;Target=FBgn0031689.1 234 372 +
Chr2	stalkie_big_nohaplotig	CDS	52621358	52621465	.	+	0	Parent=FBgn0031689.1.mrna1;Target=FBgn0031689.1 373 480 +
Chr2	stalkie_big_nohaplotig	CDS	52621731	52621835	.	+	0	Parent=FBgn0031689.1.mrna1;Target=FBgn0031689.1 481 585 +
Chr2	stalkie_big_nohaplotig	CDS	52621899	52622312	.	+	0	Parent=FBgn0031689.1.mrna1;Target=FBgn0031689.1 586 999 +
Chr2	stalkie_big_nohaplotig	CDS	52622374	52622482	.	+	0	Parent=FBgn0031689.1.mrna1;Target=FBgn0031689.1 1000 1108 +
Chr2	stalkie_big_nohaplotig	CDS	52622559	52622828	.	+	2	Parent=FBgn0031689.1.mrna1;Target=FBgn0031689.1 1109 1378 +
Chr2	stalkie_big_nohaplotig	CDS	52622893	52623056	.	+	2	Parent=FBgn0031689.1.mrna1;Target=FBgn0031689.1 1379 1542 +
Chr2	gffcl	locus	52623960	52624345	.	+	.	ID=RLOC_00017360;geneIDs=comp145498_c0_seq1.path1;transcripts=comp145498_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52623960	52624345	.	+	.	ID=comp145498_c0_seq1.mrna1;geneID=comp145498_c0_seq1.path1;Name=comp145498_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=386;mismatches=0;indels=0;unknowns=0;Target=comp145498_c0_seq1 386 1 .;CDS_Target=comp145498_c0_seq1 276 211 .;locus=RLOC_00017360
Chr2	stalkie_big_nohaplotig	exon	52623960	52624345	100	+	.	Parent=comp145498_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	52624170	52624235	.	+	0	Parent=comp145498_c0_seq1.mrna1
Chr2	gffcl	locus	52629709	52630094	.	+	.	ID=RLOC_00017361;geneIDs=comp145498_c0_seq1.path2;transcripts=comp145498_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	52629709	52630094	.	+	.	ID=comp145498_c0_seq1.mrna2;geneID=comp145498_c0_seq1.path2;Name=comp145498_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=386;mismatches=0;indels=0;unknowns=0;Target=comp145498_c0_seq1 386 1 .;CDS_Target=comp145498_c0_seq1 276 211 .;locus=RLOC_00017361
Chr2	stalkie_big_nohaplotig	exon	52629709	52630094	100	+	.	Parent=comp145498_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	52629919	52629984	.	+	0	Parent=comp145498_c0_seq1.mrna2
Chr2	gffcl	locus	52638474	52641114	.	-	.	ID=RLOC_00017362;geneIDs=FBgn0015509.1.path2;transcripts=FBgn0015509.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	52638474	52641114	.	-	.	ID=FBgn0015509.1.mrna2;geneID=FBgn0015509.1.path2;Name=FBgn0015509.1;Dir=sensecoverage=99.4;identity=99.9;matches=2458;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017362
Chr2	stalkie_big_nohaplotig	exon	52638474	52638872	100	-	.	Parent=FBgn0015509.1.mrna2;Target=FBgn0015509.1 2077 2475 +
Chr2	stalkie_big_nohaplotig	exon	52638954	52639991	99	-	.	Parent=FBgn0015509.1.mrna2;Target=FBgn0015509.1 1039 2076 +
Chr2	stalkie_big_nohaplotig	exon	52640092	52641114	99	-	.	Parent=FBgn0015509.1.mrna2;Target=FBgn0015509.1 16 1038 +
Chr2	stalkie_big_nohaplotig	CDS	52638474	52638872	.	-	0	Parent=FBgn0015509.1.mrna2;Target=FBgn0015509.1 2077 2475 +
Chr2	stalkie_big_nohaplotig	CDS	52638954	52639991	.	-	0	Parent=FBgn0015509.1.mrna2;Target=FBgn0015509.1 1039 2076 +
Chr2	stalkie_big_nohaplotig	CDS	52640092	52641114	.	-	0	Parent=FBgn0015509.1.mrna2;Target=FBgn0015509.1 16 1038 +
Chr2	gffcl	locus	52647319	52648087	.	-	.	ID=RLOC_00017363;geneIDs=comp142227_c0_seq1.path1;transcripts=comp142227_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52647319	52648087	.	-	.	ID=comp142227_c0_seq1.mrna1;geneID=comp142227_c0_seq1.path1;Name=comp142227_c0_seq1;Dir=indeterminatecoverage=92.4;identity=93.8;matches=737;mismatches=28;indels=21;unknowns=0;Target=comp142227_c0_seq1 814 33 .;CDS_Target=comp142227_c0_seq1 443 369 .;locus=RLOC_00017363
Chr2	stalkie_big_nohaplotig	exon	52647319	52648087	93	-	.	Parent=comp142227_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	52647690	52647765	.	-	0	Parent=comp142227_c0_seq1.mrna1
Chr2	gffcl	locus	52706504	52706903	.	-	.	ID=RLOC_00017364;geneIDs=comp147232_c0_seq1.path9;transcripts=comp147232_c0_seq1.mrna9
Chr2	stalkie_big_nohaplotig	mRNA	52706504	52706903	.	-	.	ID=comp147232_c0_seq1.mrna9;geneID=comp147232_c0_seq1.path9;Name=comp147232_c0_seq1;Dir=indeterminatecoverage=97.3;identity=99.5;matches=400;mismatches=0;indels=2;unknowns=0;Target=comp147232_c0_seq1 413 12 .;CDS_Target=comp147232_c0_seq1 279 136 .;locus=RLOC_00017364
Chr2	stalkie_big_nohaplotig	exon	52706504	52706903	99	-	.	Parent=comp147232_c0_seq1.mrna9
Chr2	stalkie_big_nohaplotig	CDS	52706638	52706780	.	-	0	Parent=comp147232_c0_seq1.mrna9
Chr2	gffcl	locus	52707522	52708973	.	-	.	ID=RLOC_00017365;geneIDs=comp157739_c3_seq1.path2;transcripts=comp157739_c3_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	52707522	52708973	.	-	.	ID=comp157739_c3_seq1.mrna2;geneID=comp157739_c3_seq1.path2;Name=comp157739_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1445;mismatches=5;indels=8;unknowns=0;Target=comp157739_c3_seq1 1456 1 .;CDS_Target=comp157739_c3_seq1 1025 852 .;locus=RLOC_00017365
Chr2	stalkie_big_nohaplotig	exon	52707522	52708973	99	-	.	Parent=comp157739_c3_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	52707953	52708125	.	-	0	Parent=comp157739_c3_seq1.mrna2
Chr2	gffcl	locus	52709765	52710985	.	-	.	ID=RLOC_00017366;geneIDs=comp161809_c0_seq1.path3;transcripts=comp161809_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	52709765	52710985	.	-	.	ID=comp161809_c0_seq1.mrna3;geneID=comp161809_c0_seq1.path3;Name=comp161809_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1220;mismatches=1;indels=0;unknowns=0;Target=comp161809_c0_seq1 1221 1 .;CDS_Target=comp161809_c0_seq1 941 759 .;locus=RLOC_00017366
Chr2	stalkie_big_nohaplotig	exon	52709765	52710985	99	-	.	Parent=comp161809_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	CDS	52710045	52710227	.	-	0	Parent=comp161809_c0_seq1.mrna3
Chr2	gffcl	locus	52818849	52825008	.	-	.	ID=RLOC_00017367;geneIDs=comp149107_c0_seq1.path1;transcripts=comp149107_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52818849	52825008	.	-	.	ID=comp149107_c0_seq1.mrna1;geneID=comp149107_c0_seq1.path1;Name=comp149107_c0_seq1;Dir=antisensecoverage=98.9;identity=99.2;matches=833;mismatches=7;indels=0;unknowns=0;locus=RLOC_00017367
Chr2	stalkie_big_nohaplotig	exon	52818849	52819080	100	-	.	Parent=comp149107_c0_seq1.mrna1;Target=comp149107_c0_seq1 3 234 -
Chr2	stalkie_big_nohaplotig	exon	52824333	52824462	97	-	.	Parent=comp149107_c0_seq1.mrna1;Target=comp149107_c0_seq1 235 364 -
Chr2	stalkie_big_nohaplotig	exon	52824531	52825008	99	-	.	Parent=comp149107_c0_seq1.mrna1;Target=comp149107_c0_seq1 365 842 -
Chr2	stalkie_big_nohaplotig	CDS	52824438	52824462	.	-	1	Parent=comp149107_c0_seq1.mrna1;Target=comp149107_c0_seq1 340 364 .
Chr2	stalkie_big_nohaplotig	CDS	52824531	52824811	.	-	0	Parent=comp149107_c0_seq1.mrna1;Target=comp149107_c0_seq1 365 645 .
Chr2	gffcl	locus	52873793	52875148	.	-	.	ID=RLOC_00017368;geneIDs=comp155809_c0_seq1.path1;transcripts=comp155809_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52873793	52875148	.	-	.	ID=comp155809_c0_seq1.mrna1;geneID=comp155809_c0_seq1.path1;Name=comp155809_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=1293;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017368
Chr2	stalkie_big_nohaplotig	exon	52873793	52874344	99	-	.	Parent=comp155809_c0_seq1.mrna1;Target=comp155809_c0_seq1 1 552 -
Chr2	stalkie_big_nohaplotig	exon	52874404	52875148	100	-	.	Parent=comp155809_c0_seq1.mrna1;Target=comp155809_c0_seq1 553 1297 -
Chr2	stalkie_big_nohaplotig	CDS	52873883	52874344	.	-	0	Parent=comp155809_c0_seq1.mrna1;Target=comp155809_c0_seq1 91 552 .
Chr2	stalkie_big_nohaplotig	CDS	52874404	52875147	.	-	0	Parent=comp155809_c0_seq1.mrna1;Target=comp155809_c0_seq1 553 1296 .
Chr2	gffcl	locus	52885949	52956017	.	+	.	ID=RLOC_00017369;geneIDs=FBgn0050377.1.path1;transcripts=FBgn0050377.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52885949	52956017	.	+	.	ID=FBgn0050377.1.mrna1;geneID=FBgn0050377.1.path1;Name=FBgn0050377.1;Dir=sensecoverage=100.0;identity=99.7;matches=3076;mismatches=8;indels=0;unknowns=0;locus=RLOC_00017369
Chr2	stalkie_big_nohaplotig	exon	52885949	52886583	99	+	.	Parent=FBgn0050377.1.mrna1;Target=FBgn0050377.1 1 635 +
Chr2	stalkie_big_nohaplotig	exon	52900306	52902553	99	+	.	Parent=FBgn0050377.1.mrna1;Target=FBgn0050377.1 636 2883 +
Chr2	stalkie_big_nohaplotig	exon	52955817	52956017	100	+	.	Parent=FBgn0050377.1.mrna1;Target=FBgn0050377.1 2884 3084 +
Chr2	stalkie_big_nohaplotig	CDS	52885949	52886583	.	+	0	Parent=FBgn0050377.1.mrna1;Target=FBgn0050377.1 1 635 +
Chr2	stalkie_big_nohaplotig	CDS	52900306	52902553	.	+	1	Parent=FBgn0050377.1.mrna1;Target=FBgn0050377.1 636 2883 +
Chr2	stalkie_big_nohaplotig	CDS	52955817	52956017	.	+	0	Parent=FBgn0050377.1.mrna1;Target=FBgn0050377.1 2884 3084 +
Chr2	gffcl	locus	52962997	52963721	.	+	.	ID=RLOC_00017370;geneIDs=FBgn0033232.1.path1;transcripts=FBgn0033232.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52962997	52963721	.	+	.	ID=FBgn0033232.1.mrna1;geneID=FBgn0033232.1.path1;Name=FBgn0033232.1;Dir=sensecoverage=100.0;identity=99.8;matches=593;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017370
Chr2	stalkie_big_nohaplotig	exon	52962997	52963442	99	+	.	Parent=FBgn0033232.1.mrna1;Target=FBgn0033232.1 1 446 +
Chr2	stalkie_big_nohaplotig	exon	52963574	52963721	100	+	.	Parent=FBgn0033232.1.mrna1;Target=FBgn0033232.1 447 594 +
Chr2	stalkie_big_nohaplotig	CDS	52962997	52963442	.	+	0	Parent=FBgn0033232.1.mrna1;Target=FBgn0033232.1 1 446 +
Chr2	stalkie_big_nohaplotig	CDS	52963574	52963721	.	+	1	Parent=FBgn0033232.1.mrna1;Target=FBgn0033232.1 447 594 +
Chr2	gffcl	locus	52969148	52976095	.	+	.	ID=RLOC_00017371;geneIDs=FBgn0015509.1.path1;transcripts=FBgn0015509.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52969148	52976095	.	+	.	ID=FBgn0015509.1.mrna1;geneID=FBgn0015509.1.path1;Name=FBgn0015509.1;Dir=sensecoverage=100.0;identity=99.9;matches=2472;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017371
Chr2	stalkie_big_nohaplotig	exon	52969148	52969164	100	+	.	Parent=FBgn0015509.1.mrna1;Target=FBgn0015509.1 1 17 +
Chr2	stalkie_big_nohaplotig	exon	52973457	52974477	99	+	.	Parent=FBgn0015509.1.mrna1;Target=FBgn0015509.1 18 1038 +
Chr2	stalkie_big_nohaplotig	exon	52974578	52975615	99	+	.	Parent=FBgn0015509.1.mrna1;Target=FBgn0015509.1 1039 2076 +
Chr2	stalkie_big_nohaplotig	exon	52975697	52976095	100	+	.	Parent=FBgn0015509.1.mrna1;Target=FBgn0015509.1 2077 2475 +
Chr2	stalkie_big_nohaplotig	CDS	52969148	52969164	.	+	0	Parent=FBgn0015509.1.mrna1;Target=FBgn0015509.1 1 17 +
Chr2	stalkie_big_nohaplotig	CDS	52973457	52974477	.	+	1	Parent=FBgn0015509.1.mrna1;Target=FBgn0015509.1 18 1038 +
Chr2	stalkie_big_nohaplotig	CDS	52974578	52975615	.	+	0	Parent=FBgn0015509.1.mrna1;Target=FBgn0015509.1 1039 2076 +
Chr2	stalkie_big_nohaplotig	CDS	52975697	52976095	.	+	0	Parent=FBgn0015509.1.mrna1;Target=FBgn0015509.1 2077 2475 +
Chr2	gffcl	locus	52969995	52971738	.	+	.	ID=RLOC_00017372;geneIDs=comp160939_c1_seq1.path1;transcripts=comp160939_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52969995	52971738	.	+	.	ID=comp160939_c1_seq1.mrna1;geneID=comp160939_c1_seq1.path1;Name=comp160939_c1_seq1;Dir=antisensecoverage=99.1;identity=97.3;matches=1558;mismatches=30;indels=14;unknowns=0;Target=comp160939_c1_seq1 1036 1212 .;locus=RLOC_00017372
Chr2	stalkie_big_nohaplotig	exon	52969995	52970180	100	+	.	Parent=comp160939_c1_seq1.mrna1;Target=comp160939_c1_seq1 1431 1616 -
Chr2	stalkie_big_nohaplotig	exon	52970257	52970973	96	+	.	Parent=comp160939_c1_seq1.mrna1;Target=comp160939_c1_seq1 703 1430 -
Chr2	stalkie_big_nohaplotig	exon	52971054	52971738	97	+	.	Parent=comp160939_c1_seq1.mrna1;Target=comp160939_c1_seq1 15 702 -
Chr2	stalkie_big_nohaplotig	CDS	52970471	52970647	.	+	0	Parent=comp160939_c1_seq1.mrna1
Chr2	gffcl	locus	52983473	52985690	.	-	.	ID=RLOC_00017373;geneIDs=FBgn0031689.1.path2;transcripts=FBgn0031689.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	52983473	52985690	.	-	.	ID=FBgn0031689.1.mrna2;geneID=FBgn0031689.1.path2;Name=FBgn0031689.1;Dir=sensecoverage=100.0;identity=99.5;matches=1534;mismatches=8;indels=0;unknowns=0;locus=RLOC_00017373
Chr2	stalkie_big_nohaplotig	exon	52983473	52983636	99	-	.	Parent=FBgn0031689.1.mrna2;Target=FBgn0031689.1 1379 1542 +
Chr2	stalkie_big_nohaplotig	exon	52983701	52983970	99	-	.	Parent=FBgn0031689.1.mrna2;Target=FBgn0031689.1 1109 1378 +
Chr2	stalkie_big_nohaplotig	exon	52984047	52984155	98	-	.	Parent=FBgn0031689.1.mrna2;Target=FBgn0031689.1 1000 1108 +
Chr2	stalkie_big_nohaplotig	exon	52984217	52984630	99	-	.	Parent=FBgn0031689.1.mrna2;Target=FBgn0031689.1 586 999 +
Chr2	stalkie_big_nohaplotig	exon	52984694	52984798	99	-	.	Parent=FBgn0031689.1.mrna2;Target=FBgn0031689.1 481 585 +
Chr2	stalkie_big_nohaplotig	exon	52985074	52985181	100	-	.	Parent=FBgn0031689.1.mrna2;Target=FBgn0031689.1 373 480 +
Chr2	stalkie_big_nohaplotig	exon	52985250	52985388	100	-	.	Parent=FBgn0031689.1.mrna2;Target=FBgn0031689.1 234 372 +
Chr2	stalkie_big_nohaplotig	exon	52985458	52985690	99	-	.	Parent=FBgn0031689.1.mrna2;Target=FBgn0031689.1 1 233 +
Chr2	stalkie_big_nohaplotig	CDS	52983473	52983636	.	-	2	Parent=FBgn0031689.1.mrna2;Target=FBgn0031689.1 1379 1542 +
Chr2	stalkie_big_nohaplotig	CDS	52983701	52983970	.	-	2	Parent=FBgn0031689.1.mrna2;Target=FBgn0031689.1 1109 1378 +
Chr2	stalkie_big_nohaplotig	CDS	52984047	52984155	.	-	0	Parent=FBgn0031689.1.mrna2;Target=FBgn0031689.1 1000 1108 +
Chr2	stalkie_big_nohaplotig	CDS	52984217	52984630	.	-	0	Parent=FBgn0031689.1.mrna2;Target=FBgn0031689.1 586 999 +
Chr2	stalkie_big_nohaplotig	CDS	52984694	52984798	.	-	0	Parent=FBgn0031689.1.mrna2;Target=FBgn0031689.1 481 585 +
Chr2	stalkie_big_nohaplotig	CDS	52985074	52985181	.	-	0	Parent=FBgn0031689.1.mrna2;Target=FBgn0031689.1 373 480 +
Chr2	stalkie_big_nohaplotig	CDS	52985250	52985388	.	-	1	Parent=FBgn0031689.1.mrna2;Target=FBgn0031689.1 234 372 +
Chr2	stalkie_big_nohaplotig	CDS	52985458	52985690	.	-	0	Parent=FBgn0031689.1.mrna2;Target=FBgn0031689.1 1 233 +
Chr2	gffcl	locus	52990216	52990711	.	+	.	ID=RLOC_00017374;geneIDs=comp141164_c0_seq1.path1;transcripts=comp141164_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52990216	52990711	.	+	.	ID=comp141164_c0_seq1.mrna1;geneID=comp141164_c0_seq1.path1;Name=comp141164_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=496;mismatches=0;indels=0;unknowns=0;Target=comp141164_c0_seq1 496 1 .;CDS_Target=comp141164_c0_seq1 270 178 .;locus=RLOC_00017374
Chr2	stalkie_big_nohaplotig	exon	52990216	52990711	100	+	.	Parent=comp141164_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	52990393	52990485	.	+	0	Parent=comp141164_c0_seq1.mrna1
Chr2	gffcl	locus	52991905	53000632	.	-	.	ID=RLOC_00017375;geneIDs=FBgn0033233.1.path1,comp156067_c0_seq1.path1;transcripts=comp156067_c0_seq1.mrna1,FBgn0033233.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52991905	53000632	.	-	.	ID=comp156067_c0_seq1.mrna1;geneID=comp156067_c0_seq1.path1;Name=comp156067_c0_seq1;Dir=sensecoverage=100.0;identity=99.1;matches=2077;mismatches=10;indels=9;unknowns=0;locus=RLOC_00017375
Chr2	stalkie_big_nohaplotig	exon	52991905	52992621	98	-	.	Parent=comp156067_c0_seq1.mrna1;Target=comp156067_c0_seq1 1380 2087 +
Chr2	stalkie_big_nohaplotig	exon	52996451	52996592	99	-	.	Parent=comp156067_c0_seq1.mrna1;Target=comp156067_c0_seq1 1238 1379 +
Chr2	stalkie_big_nohaplotig	exon	52996648	52997506	99	-	.	Parent=comp156067_c0_seq1.mrna1;Target=comp156067_c0_seq1 379 1237 +
Chr2	stalkie_big_nohaplotig	exon	53000255	53000632	98	-	.	Parent=comp156067_c0_seq1.mrna1;Target=comp156067_c0_seq1 1 378 +
Chr2	stalkie_big_nohaplotig	CDS	52992526	52992621	.	-	0	Parent=comp156067_c0_seq1.mrna1;Target=comp156067_c0_seq1 1380 1475 +
Chr2	stalkie_big_nohaplotig	CDS	52996451	52996592	.	-	1	Parent=comp156067_c0_seq1.mrna1;Target=comp156067_c0_seq1 1238 1379 +
Chr2	stalkie_big_nohaplotig	CDS	52996648	52997506	.	-	2	Parent=comp156067_c0_seq1.mrna1;Target=comp156067_c0_seq1 379 1237 +
Chr2	stalkie_big_nohaplotig	CDS	53000255	53000489	.	-	0	Parent=comp156067_c0_seq1.mrna1;Target=comp156067_c0_seq1 144 378 +
Chr2	stalkie_big_nohaplotig	mRNA	52996286	53000498	.	-	.	ID=FBgn0033233.1.mrna1;geneID=FBgn0033233.1.path1;Name=FBgn0033233.1;Dir=sensecoverage=100.0;identity=99.6;matches=1404;mismatches=6;indels=0;unknowns=0;locus=RLOC_00017375
Chr2	stalkie_big_nohaplotig	exon	52996286	52996592	99	-	.	Parent=FBgn0033233.1.mrna1;Target=FBgn0033233.1 1104 1410 +
Chr2	stalkie_big_nohaplotig	exon	52996648	52997506	99	-	.	Parent=FBgn0033233.1.mrna1;Target=FBgn0033233.1 245 1103 +
Chr2	stalkie_big_nohaplotig	exon	53000255	53000498	98	-	.	Parent=FBgn0033233.1.mrna1;Target=FBgn0033233.1 1 244 +
Chr2	stalkie_big_nohaplotig	CDS	52996286	52996592	.	-	1	Parent=FBgn0033233.1.mrna1;Target=FBgn0033233.1 1104 1410 +
Chr2	stalkie_big_nohaplotig	CDS	52996648	52997506	.	-	2	Parent=FBgn0033233.1.mrna1;Target=FBgn0033233.1 245 1103 +
Chr2	stalkie_big_nohaplotig	CDS	53000255	53000498	.	-	0	Parent=FBgn0033233.1.mrna1;Target=FBgn0033233.1 1 244 +
Chr2	gffcl	locus	52993179	52994729	.	-	.	ID=RLOC_00017376;geneIDs=comp151393_c0_seq1.path1,comp157525_c0_seq1.path1;transcripts=comp157525_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52993544	52994729	.	-	.	ID=comp157525_c0_seq1.mrna1;geneID=comp157525_c0_seq1.path1;Name=comp157525_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.7;matches=1183;mismatches=3;indels=0;unknowns=0;Target=comp157525_c0_seq1 1194 9 .;CDS_Target=comp157525_c0_seq1 1193 1044 .;locus=RLOC_00017376
Chr2	stalkie_big_nohaplotig	exon	52993544	52994729	99	-	.	Parent=comp157525_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	52993545	52993694	.	-	0	Parent=comp157525_c0_seq1.mrna1
Chr2	gffcl	locus	52999173	52999964	.	+	.	ID=RLOC_00017377;geneIDs=FBgn0025366.1.path1;transcripts=FBgn0025366.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	52999173	52999964	.	+	.	ID=FBgn0025366.1.mrna1;geneID=FBgn0025366.1.path1;Name=FBgn0025366.1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=780;mismatches=12;indels=0;unknowns=0;Target=FBgn0025366.1 792 1 .;locus=RLOC_00017377
Chr2	stalkie_big_nohaplotig	exon	52999173	52999964	98	+	.	Parent=FBgn0025366.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	52999173	52999964	.	+	0	Parent=FBgn0025366.1.mrna1
Chr2	gffcl	locus	53019246	53020795	.	+	.	ID=RLOC_00017378;geneIDs=FBgn0033234.1.path1;transcripts=FBgn0033234.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53019246	53020795	.	+	.	ID=FBgn0033234.1.mrna1;geneID=FBgn0033234.1.path1;Name=FBgn0033234.1;Dir=sensecoverage=94.7;identity=99.8;matches=1409;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017378
Chr2	stalkie_big_nohaplotig	exon	53019246	53019916	99	+	.	Parent=FBgn0033234.1.mrna1;Target=FBgn0033234.1 80 750 +
Chr2	stalkie_big_nohaplotig	exon	53019983	53020510	100	+	.	Parent=FBgn0033234.1.mrna1;Target=FBgn0033234.1 751 1278 +
Chr2	stalkie_big_nohaplotig	exon	53020583	53020795	99	+	.	Parent=FBgn0033234.1.mrna1;Target=FBgn0033234.1 1279 1491 +
Chr2	stalkie_big_nohaplotig	CDS	53019248	53019916	.	+	0	Parent=FBgn0033234.1.mrna1;Target=FBgn0033234.1 82 750 +
Chr2	stalkie_big_nohaplotig	CDS	53019983	53020510	.	+	0	Parent=FBgn0033234.1.mrna1;Target=FBgn0033234.1 751 1278 +
Chr2	stalkie_big_nohaplotig	CDS	53020583	53020795	.	+	0	Parent=FBgn0033234.1.mrna1;Target=FBgn0033234.1 1279 1491 +
Chr2	gffcl	locus	53024127	53025107	.	-	.	ID=RLOC_00017379;geneIDs=FBgn0050381.1.path1;transcripts=FBgn0050381.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53024127	53025107	.	-	.	ID=FBgn0050381.1.mrna1;geneID=FBgn0050381.1.path1;Name=FBgn0050381.1;Dir=sensecoverage=100.0;identity=99.6;matches=804;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017379
Chr2	stalkie_big_nohaplotig	exon	53024127	53024520	99	-	.	Parent=FBgn0050381.1.mrna1;Target=FBgn0050381.1 414 807 +
Chr2	stalkie_big_nohaplotig	exon	53024579	53024727	100	-	.	Parent=FBgn0050381.1.mrna1;Target=FBgn0050381.1 265 413 +
Chr2	stalkie_big_nohaplotig	exon	53024789	53024921	99	-	.	Parent=FBgn0050381.1.mrna1;Target=FBgn0050381.1 132 264 +
Chr2	stalkie_big_nohaplotig	exon	53024977	53025107	99	-	.	Parent=FBgn0050381.1.mrna1;Target=FBgn0050381.1 1 131 +
Chr2	stalkie_big_nohaplotig	CDS	53024127	53024520	.	-	1	Parent=FBgn0050381.1.mrna1;Target=FBgn0050381.1 414 807 +
Chr2	stalkie_big_nohaplotig	CDS	53024579	53024727	.	-	0	Parent=FBgn0050381.1.mrna1;Target=FBgn0050381.1 265 413 +
Chr2	stalkie_big_nohaplotig	CDS	53024789	53024921	.	-	1	Parent=FBgn0050381.1.mrna1;Target=FBgn0050381.1 132 264 +
Chr2	stalkie_big_nohaplotig	CDS	53024977	53025107	.	-	0	Parent=FBgn0050381.1.mrna1;Target=FBgn0050381.1 1 131 +
Chr2	gffcl	locus	53025309	53025748	.	+	.	ID=RLOC_00017380;geneIDs=comp640579_c0_seq1.path1;transcripts=comp640579_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53025309	53025748	.	+	.	ID=comp640579_c0_seq1.mrna1;geneID=comp640579_c0_seq1.path1;Name=comp640579_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=438;mismatches=2;indels=0;unknowns=0;Target=comp640579_c0_seq1 440 1 .;CDS_Target=comp640579_c0_seq1 197 105 .;locus=RLOC_00017380
Chr2	stalkie_big_nohaplotig	exon	53025309	53025748	99	+	.	Parent=comp640579_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	53025413	53025505	.	+	0	Parent=comp640579_c0_seq1.mrna1
Chr2	gffcl	locus	53026291	53027591	.	-	.	ID=RLOC_00017381;geneIDs=FBgn0023171.1.path1;transcripts=FBgn0023171.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53026291	53027591	.	-	.	ID=FBgn0023171.1.mrna1;geneID=FBgn0023171.1.path1;Name=FBgn0023171.1;Dir=sensecoverage=100.0;identity=99.4;matches=1065;mismatches=6;indels=0;unknowns=0;locus=RLOC_00017381
Chr2	stalkie_big_nohaplotig	exon	53026291	53026389	100	-	.	Parent=FBgn0023171.1.mrna1;Target=FBgn0023171.1 973 1071 +
Chr2	stalkie_big_nohaplotig	exon	53026449	53026719	100	-	.	Parent=FBgn0023171.1.mrna1;Target=FBgn0023171.1 702 972 +
Chr2	stalkie_big_nohaplotig	exon	53026780	53027072	99	-	.	Parent=FBgn0023171.1.mrna1;Target=FBgn0023171.1 409 701 +
Chr2	stalkie_big_nohaplotig	exon	53027133	53027391	98	-	.	Parent=FBgn0023171.1.mrna1;Target=FBgn0023171.1 150 408 +
Chr2	stalkie_big_nohaplotig	exon	53027443	53027591	98	-	.	Parent=FBgn0023171.1.mrna1;Target=FBgn0023171.1 1 149 +
Chr2	stalkie_big_nohaplotig	CDS	53026291	53026389	.	-	0	Parent=FBgn0023171.1.mrna1;Target=FBgn0023171.1 973 1071 +
Chr2	stalkie_big_nohaplotig	CDS	53026449	53026719	.	-	1	Parent=FBgn0023171.1.mrna1;Target=FBgn0023171.1 702 972 +
Chr2	stalkie_big_nohaplotig	CDS	53026780	53027072	.	-	0	Parent=FBgn0023171.1.mrna1;Target=FBgn0023171.1 409 701 +
Chr2	stalkie_big_nohaplotig	CDS	53027133	53027391	.	-	1	Parent=FBgn0023171.1.mrna1;Target=FBgn0023171.1 150 408 +
Chr2	stalkie_big_nohaplotig	CDS	53027443	53027591	.	-	0	Parent=FBgn0023171.1.mrna1;Target=FBgn0023171.1 1 149 +
Chr2	gffcl	locus	53029267	53033895	.	+	.	ID=RLOC_00017382;geneIDs=FBgn0026722.1.path1;transcripts=FBgn0026722.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53029267	53033895	.	+	.	ID=FBgn0026722.1.mrna1;geneID=FBgn0026722.1.path1;Name=FBgn0026722.1;Dir=sensecoverage=100.0;identity=99.8;matches=4256;mismatches=10;indels=0;unknowns=0;locus=RLOC_00017382
Chr2	stalkie_big_nohaplotig	exon	53029267	53029886	100	+	.	Parent=FBgn0026722.1.mrna1;Target=FBgn0026722.1 1 620 +
Chr2	stalkie_big_nohaplotig	exon	53029952	53030850	100	+	.	Parent=FBgn0026722.1.mrna1;Target=FBgn0026722.1 621 1519 +
Chr2	stalkie_big_nohaplotig	exon	53030939	53031680	99	+	.	Parent=FBgn0026722.1.mrna1;Target=FBgn0026722.1 1520 2261 +
Chr2	stalkie_big_nohaplotig	exon	53031745	53032355	99	+	.	Parent=FBgn0026722.1.mrna1;Target=FBgn0026722.1 2262 2872 +
Chr2	stalkie_big_nohaplotig	exon	53032422	53033369	99	+	.	Parent=FBgn0026722.1.mrna1;Target=FBgn0026722.1 2873 3820 +
Chr2	stalkie_big_nohaplotig	exon	53033450	53033895	100	+	.	Parent=FBgn0026722.1.mrna1;Target=FBgn0026722.1 3821 4266 +
Chr2	stalkie_big_nohaplotig	CDS	53029267	53029886	.	+	0	Parent=FBgn0026722.1.mrna1;Target=FBgn0026722.1 1 620 +
Chr2	stalkie_big_nohaplotig	CDS	53029952	53030850	.	+	1	Parent=FBgn0026722.1.mrna1;Target=FBgn0026722.1 621 1519 +
Chr2	stalkie_big_nohaplotig	CDS	53030939	53031680	.	+	2	Parent=FBgn0026722.1.mrna1;Target=FBgn0026722.1 1520 2261 +
Chr2	stalkie_big_nohaplotig	CDS	53031745	53032355	.	+	1	Parent=FBgn0026722.1.mrna1;Target=FBgn0026722.1 2262 2872 +
Chr2	stalkie_big_nohaplotig	CDS	53032422	53033369	.	+	2	Parent=FBgn0026722.1.mrna1;Target=FBgn0026722.1 2873 3820 +
Chr2	stalkie_big_nohaplotig	CDS	53033450	53033895	.	+	2	Parent=FBgn0026722.1.mrna1;Target=FBgn0026722.1 3821 4266 +
Chr2	gffcl	locus	53034163	53035527	.	-	.	ID=RLOC_00017383;geneIDs=comp158537_c0_seq1.path1;transcripts=comp158537_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53034163	53035527	.	-	.	ID=comp158537_c0_seq1.mrna1;geneID=comp158537_c0_seq1.path1;Name=comp158537_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=1343;mismatches=8;indels=38;unknowns=0;Target=comp158537_c0_seq1 1375 1 .;CDS_Target=comp158537_c0_seq1 1119 1042 .;locus=RLOC_00017383
Chr2	stalkie_big_nohaplotig	exon	53034163	53035527	96	-	.	Parent=comp158537_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	53034419	53034496	.	-	0	Parent=comp158537_c0_seq1.mrna1
Chr2	gffcl	locus	53035582	53037573	.	-	.	ID=RLOC_00017384;geneIDs=FBgn0033235.1.path1;transcripts=FBgn0033235.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53035582	53037573	.	-	.	ID=FBgn0033235.1.mrna1;geneID=FBgn0033235.1.path1;Name=FBgn0033235.1;Dir=sensecoverage=100.0;identity=99.6;matches=1677;mismatches=6;indels=0;unknowns=0;locus=RLOC_00017384
Chr2	stalkie_big_nohaplotig	exon	53035582	53035748	100	-	.	Parent=FBgn0033235.1.mrna1;Target=FBgn0033235.1 1517 1683 +
Chr2	stalkie_big_nohaplotig	exon	53035815	53036319	99	-	.	Parent=FBgn0033235.1.mrna1;Target=FBgn0033235.1 1012 1516 +
Chr2	stalkie_big_nohaplotig	exon	53036376	53036516	100	-	.	Parent=FBgn0033235.1.mrna1;Target=FBgn0033235.1 871 1011 +
Chr2	stalkie_big_nohaplotig	exon	53036583	53036999	99	-	.	Parent=FBgn0033235.1.mrna1;Target=FBgn0033235.1 454 870 +
Chr2	stalkie_big_nohaplotig	exon	53037059	53037461	99	-	.	Parent=FBgn0033235.1.mrna1;Target=FBgn0033235.1 51 453 +
Chr2	stalkie_big_nohaplotig	exon	53037524	53037573	100	-	.	Parent=FBgn0033235.1.mrna1;Target=FBgn0033235.1 1 50 +
Chr2	stalkie_big_nohaplotig	CDS	53035582	53035748	.	-	2	Parent=FBgn0033235.1.mrna1;Target=FBgn0033235.1 1517 1683 +
Chr2	stalkie_big_nohaplotig	CDS	53035815	53036319	.	-	0	Parent=FBgn0033235.1.mrna1;Target=FBgn0033235.1 1012 1516 +
Chr2	stalkie_big_nohaplotig	CDS	53036376	53036516	.	-	0	Parent=FBgn0033235.1.mrna1;Target=FBgn0033235.1 871 1011 +
Chr2	stalkie_big_nohaplotig	CDS	53036583	53036999	.	-	0	Parent=FBgn0033235.1.mrna1;Target=FBgn0033235.1 454 870 +
Chr2	stalkie_big_nohaplotig	CDS	53037059	53037461	.	-	1	Parent=FBgn0033235.1.mrna1;Target=FBgn0033235.1 51 453 +
Chr2	stalkie_big_nohaplotig	CDS	53037524	53037573	.	-	0	Parent=FBgn0033235.1.mrna1;Target=FBgn0033235.1 1 50 +
Chr2	gffcl	locus	53039730	53040029	.	-	.	ID=RLOC_00017385;geneIDs=FBgn0050380.1.path1;transcripts=FBgn0050380.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53039730	53040029	.	-	.	ID=FBgn0050380.1.mrna1;geneID=FBgn0050380.1.path1;Name=FBgn0050380.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=298;mismatches=2;indels=0;unknowns=0;Target=FBgn0050380.1 300 1 .;locus=RLOC_00017385
Chr2	stalkie_big_nohaplotig	exon	53039730	53040029	99	-	.	Parent=FBgn0050380.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	53039730	53040029	.	-	0	Parent=FBgn0050380.1.mrna1
Chr2	gffcl	locus	53046508	53089368	.	-	.	ID=RLOC_00017386;geneIDs=FBgn0033236.1.path1;transcripts=FBgn0033236.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53046508	53089368	.	-	.	ID=FBgn0033236.1.mrna1;geneID=FBgn0033236.1.path1;Name=FBgn0033236.1;Dir=sensecoverage=100.0;identity=99.6;matches=1100;mismatches=3;indels=1;unknowns=0;Target=FBgn0033236.1 3 89 +;locus=RLOC_00017386
Chr2	stalkie_big_nohaplotig	exon	53046508	53046755	100	-	.	Parent=FBgn0033236.1.mrna1;Target=FBgn0033236.1 857 1104 +
Chr2	stalkie_big_nohaplotig	exon	53088514	53089368	99	-	.	Parent=FBgn0033236.1.mrna1;Target=FBgn0033236.1 1 856 +
Chr2	stalkie_big_nohaplotig	CDS	53089281	53089366	.	-	0	Parent=FBgn0033236.1.mrna1
Chr2	gffcl	locus	53067914	53069542	.	+	.	ID=RLOC_00017388;geneIDs=FBgn0085459.1.path1;transcripts=FBgn0085459.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53067914	53069542	.	+	.	ID=FBgn0085459.1.mrna1;geneID=FBgn0085459.1.path1;Name=FBgn0085459.1;Dir=sensecoverage=100.0;identity=99.6;matches=890;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017388
Chr2	stalkie_big_nohaplotig	exon	53067914	53068052	99	+	.	Parent=FBgn0085459.1.mrna1;Target=FBgn0085459.1 1 139 +
Chr2	stalkie_big_nohaplotig	exon	53068661	53068782	100	+	.	Parent=FBgn0085459.1.mrna1;Target=FBgn0085459.1 140 261 +
Chr2	stalkie_big_nohaplotig	exon	53068851	53069087	99	+	.	Parent=FBgn0085459.1.mrna1;Target=FBgn0085459.1 262 498 +
Chr2	stalkie_big_nohaplotig	exon	53069147	53069542	99	+	.	Parent=FBgn0085459.1.mrna1;Target=FBgn0085459.1 499 894 +
Chr2	stalkie_big_nohaplotig	CDS	53067914	53068052	.	+	0	Parent=FBgn0085459.1.mrna1;Target=FBgn0085459.1 1 139 +
Chr2	stalkie_big_nohaplotig	CDS	53068661	53068782	.	+	2	Parent=FBgn0085459.1.mrna1;Target=FBgn0085459.1 140 261 +
Chr2	stalkie_big_nohaplotig	CDS	53068851	53069087	.	+	0	Parent=FBgn0085459.1.mrna1;Target=FBgn0085459.1 262 498 +
Chr2	stalkie_big_nohaplotig	CDS	53069147	53069542	.	+	0	Parent=FBgn0085459.1.mrna1;Target=FBgn0085459.1 499 894 +
Chr2	gffcl	locus	53151239	53151661	.	-	.	ID=RLOC_00017389;geneIDs=comp135607_c0_seq1.path1;transcripts=comp135607_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53151239	53151661	.	-	.	ID=comp135607_c0_seq1.mrna1;geneID=comp135607_c0_seq1.path1;Name=comp135607_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=421;mismatches=2;indels=0;unknowns=0;Target=comp135607_c0_seq1 423 1 .;CDS_Target=comp135607_c0_seq1 148 2 .;locus=RLOC_00017389
Chr2	stalkie_big_nohaplotig	exon	53151239	53151661	99	-	.	Parent=comp135607_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	53151514	53151660	.	-	0	Parent=comp135607_c0_seq1.mrna1
Chr2	gffcl	locus	53197593	53198213	.	+	.	ID=RLOC_00017390;geneIDs=comp147736_c0_seq1.path1;transcripts=comp147736_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53197593	53198213	.	+	.	ID=comp147736_c0_seq1.mrna1;geneID=comp147736_c0_seq1.path1;Name=comp147736_c0_seq1;Dir=indeterminatecoverage=99.7;identity=91.6;matches=576;mismatches=42;indels=11;unknowns=0;Target=comp147736_c0_seq1 627 2 .;CDS_Target=comp147736_c0_seq1 598 527 .;locus=RLOC_00017390
Chr2	stalkie_big_nohaplotig	exon	53197593	53198213	91	+	.	Parent=comp147736_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	53198113	53198184	.	+	0	Parent=comp147736_c0_seq1.mrna1
Chr2	gffcl	locus	53277262	53438828	.	-	.	ID=RLOC_00017391;geneIDs=comp118313_c0_seq1.path1;transcripts=comp118313_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53277262	53438828	.	-	.	ID=comp118313_c0_seq1.mrna1;geneID=comp118313_c0_seq1.path1;Name=comp118313_c0_seq1;Dir=sensecoverage=93.0;identity=100.0;matches=317;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017391
Chr2	stalkie_big_nohaplotig	exon	53277262	53277299	100	-	.	Parent=comp118313_c0_seq1.mrna1;Target=comp118313_c0_seq1 280 317 +
Chr2	stalkie_big_nohaplotig	exon	53374308	53374425	100	-	.	Parent=comp118313_c0_seq1.mrna1;Target=comp118313_c0_seq1 162 279 +
Chr2	stalkie_big_nohaplotig	exon	53438668	53438828	100	-	.	Parent=comp118313_c0_seq1.mrna1;Target=comp118313_c0_seq1 1 161 +
Chr2	stalkie_big_nohaplotig	CDS	53277264	53277299	.	-	0	Parent=comp118313_c0_seq1.mrna1;Target=comp118313_c0_seq1 280 315 +
Chr2	stalkie_big_nohaplotig	CDS	53374308	53374376	.	-	0	Parent=comp118313_c0_seq1.mrna1;Target=comp118313_c0_seq1 211 279 +
Chr2	gffcl	locus	53311331	53313800	.	+	.	ID=RLOC_00017392;geneIDs=FBgn0033033.path1;transcripts=FBgn0033033.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53311331	53313800	.	+	.	ID=FBgn0033033.mrna1;geneID=FBgn0033033.path1;Name=FBgn0033033;Dir=sensecoverage=100.0;identity=99.8;matches=1159;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017392
Chr2	stalkie_big_nohaplotig	exon	53311331	53311777	99	+	.	Parent=FBgn0033033.mrna1;Target=FBgn0033033 1 447 +
Chr2	stalkie_big_nohaplotig	exon	53311851	53312005	100	+	.	Parent=FBgn0033033.mrna1;Target=FBgn0033033 448 602 +
Chr2	stalkie_big_nohaplotig	exon	53313168	53313436	100	+	.	Parent=FBgn0033033.mrna1;Target=FBgn0033033 603 871 +
Chr2	stalkie_big_nohaplotig	exon	53313511	53313800	100	+	.	Parent=FBgn0033033.mrna1;Target=FBgn0033033 872 1161 +
Chr2	stalkie_big_nohaplotig	CDS	53311331	53311777	.	+	0	Parent=FBgn0033033.mrna1;Target=FBgn0033033 1 447 +
Chr2	stalkie_big_nohaplotig	CDS	53311851	53312005	.	+	0	Parent=FBgn0033033.mrna1;Target=FBgn0033033 448 602 +
Chr2	stalkie_big_nohaplotig	CDS	53313168	53313436	.	+	1	Parent=FBgn0033033.mrna1;Target=FBgn0033033 603 871 +
Chr2	stalkie_big_nohaplotig	CDS	53313511	53313800	.	+	2	Parent=FBgn0033033.mrna1;Target=FBgn0033033 872 1161 +
Chr2	gffcl	locus	53341185	53342579	.	-	.	ID=RLOC_00017394;geneIDs=FBgn0032586.4.path1;transcripts=FBgn0032586.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53341185	53342579	.	-	.	ID=FBgn0032586.4.mrna1;geneID=FBgn0032586.4.path1;Name=FBgn0032586.4;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1387;mismatches=8;indels=0;unknowns=0;Target=FBgn0032586.4 1395 1 .;locus=RLOC_00017394
Chr2	stalkie_big_nohaplotig	exon	53341185	53342579	99	-	.	Parent=FBgn0032586.4.mrna1
Chr2	stalkie_big_nohaplotig	CDS	53341185	53342579	.	-	0	Parent=FBgn0032586.4.mrna1
Chr2	gffcl	locus	53380484	53381470	.	-	.	ID=RLOC_00017395;geneIDs=ORF2033.path1;transcripts=ORF2033.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53380484	53381470	.	-	.	ID=ORF2033.mrna1;geneID=ORF2033.path1;Name=ORF2033;Dir=sensecoverage=100.0;identity=99.6;matches=929;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017395
Chr2	stalkie_big_nohaplotig	exon	53380484	53381306	99	-	.	Parent=ORF2033.mrna1;Target=ORF2033 111 933 +
Chr2	stalkie_big_nohaplotig	exon	53381361	53381470	100	-	.	Parent=ORF2033.mrna1;Target=ORF2033 1 110 +
Chr2	stalkie_big_nohaplotig	CDS	53380484	53381306	.	-	1	Parent=ORF2033.mrna1;Target=ORF2033 111 933 +
Chr2	stalkie_big_nohaplotig	CDS	53381361	53381470	.	-	0	Parent=ORF2033.mrna1;Target=ORF2033 1 110 +
Chr2	gffcl	locus	53406610	53406759	.	+	.	ID=RLOC_00017396;geneIDs=ORF658.path2;transcripts=ORF658.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	53406610	53406759	.	+	.	ID=ORF658.mrna2;geneID=ORF658.path2;Name=ORF658;Dir=indeterminatecoverage=9.6;identity=98.7;matches=148;mismatches=2;indels=0;unknowns=0;Target=ORF658 1557 1408 .;locus=RLOC_00017396
Chr2	stalkie_big_nohaplotig	exon	53406610	53406759	98	+	.	Parent=ORF658.mrna2
Chr2	stalkie_big_nohaplotig	CDS	53406610	53406759	.	+	0	Parent=ORF658.mrna2
Chr2	gffcl	locus	53409812	53410306	.	-	.	ID=RLOC_00017397;geneIDs=comp2446_c0_seq1.path1;transcripts=comp2446_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53409812	53410306	.	-	.	ID=comp2446_c0_seq1.mrna1;geneID=comp2446_c0_seq1.path1;Name=comp2446_c0_seq1;Dir=indeterminatecoverage=99.4;identity=85.8;matches=453;mismatches=26;indels=49;unknowns=0;Target=comp2446_c0_seq1 512 1 .;CDS_Target=comp2446_c0_seq1 333 205 .;locus=RLOC_00017397
Chr2	stalkie_big_nohaplotig	exon	53409812	53410306	85	-	.	Parent=comp2446_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	53410006	53410102	.	-	0	Parent=comp2446_c0_seq1.mrna1
Chr2	gffcl	locus	53555594	53556292	.	+	.	ID=RLOC_00017399;geneIDs=Dv_FBgn0209813.1.path2;transcripts=Dv_FBgn0209813.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	53555594	53556292	.	+	.	ID=Dv_FBgn0209813.1.mrna2;geneID=Dv_FBgn0209813.1.path2;Name=Dv_FBgn0209813.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=699;mismatches=0;indels=0;unknowns=0;Target=Dv_FBgn0209813.1 699 1 .;locus=RLOC_00017399
Chr2	stalkie_big_nohaplotig	exon	53555594	53556292	100	+	.	Parent=Dv_FBgn0209813.1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	53555594	53556292	.	+	0	Parent=Dv_FBgn0209813.1.mrna2
Chr2	gffcl	locus	53705834	53811458	.	-	.	ID=RLOC_00017400;geneIDs=comp58757_c0_seq1.path1;transcripts=comp58757_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53705834	53811458	.	-	.	ID=comp58757_c0_seq1.mrna1;geneID=comp58757_c0_seq1.path1;Name=comp58757_c0_seq1;Dir=indeterminatecoverage=25.5;identity=88.5;matches=276;mismatches=1;indels=35;unknowns=0;Target=comp58757_c0_seq1 591 484 .;locus=RLOC_00017400
Chr2	stalkie_big_nohaplotig	exon	53705834	53705842	100	-	.	Parent=comp58757_c0_seq1.mrna1;Target=comp58757_c0_seq1 758 750 .
Chr2	stalkie_big_nohaplotig	exon	53705984	53706030	25	-	.	Parent=comp58757_c0_seq1.mrna1;Target=comp58757_c0_seq1 749 738 .
Chr2	stalkie_big_nohaplotig	exon	53730396	53730400	100	-	.	Parent=comp58757_c0_seq1.mrna1;Target=comp58757_c0_seq1 737 733 .
Chr2	stalkie_big_nohaplotig	exon	53737550	53737554	100	-	.	Parent=comp58757_c0_seq1.mrna1;Target=comp58757_c0_seq1 732 728 .
Chr2	stalkie_big_nohaplotig	exon	53743116	53743122	100	-	.	Parent=comp58757_c0_seq1.mrna1;Target=comp58757_c0_seq1 727 721 .
Chr2	stalkie_big_nohaplotig	exon	53743810	53743817	100	-	.	Parent=comp58757_c0_seq1.mrna1;Target=comp58757_c0_seq1 720 713 .
Chr2	stalkie_big_nohaplotig	exon	53748554	53748561	100	-	.	Parent=comp58757_c0_seq1.mrna1;Target=comp58757_c0_seq1 712 705 .
Chr2	stalkie_big_nohaplotig	exon	53755709	53755711	100	-	.	Parent=comp58757_c0_seq1.mrna1;Target=comp58757_c0_seq1 704 702 .
Chr2	stalkie_big_nohaplotig	exon	53761807	53761809	100	-	.	Parent=comp58757_c0_seq1.mrna1;Target=comp58757_c0_seq1 701 699 .
Chr2	stalkie_big_nohaplotig	exon	53794454	53794455	100	-	.	Parent=comp58757_c0_seq1.mrna1;Target=comp58757_c0_seq1 698 697 .
Chr2	stalkie_big_nohaplotig	exon	53811244	53811458	99	-	.	Parent=comp58757_c0_seq1.mrna1;Target=comp58757_c0_seq1 696 482 .
Chr2	stalkie_big_nohaplotig	CDS	53811349	53811456	.	-	0	Parent=comp58757_c0_seq1.mrna1
Chr2	gffcl	locus	53801618	53802086	.	+	.	ID=RLOC_00017402;geneIDs=FBgn0053198.1.path1;transcripts=FBgn0053198.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53801618	53802086	.	+	.	ID=FBgn0053198.1.mrna1;geneID=FBgn0053198.1.path1;Name=FBgn0053198.1;Dir=sensecoverage=100.0;identity=100.0;matches=318;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017402
Chr2	stalkie_big_nohaplotig	exon	53801618	53801693	100	+	.	Parent=FBgn0053198.1.mrna1;Target=FBgn0053198.1 1 76 +
Chr2	stalkie_big_nohaplotig	exon	53801783	53801887	100	+	.	Parent=FBgn0053198.1.mrna1;Target=FBgn0053198.1 77 181 +
Chr2	stalkie_big_nohaplotig	exon	53801950	53802086	100	+	.	Parent=FBgn0053198.1.mrna1;Target=FBgn0053198.1 182 318 +
Chr2	stalkie_big_nohaplotig	CDS	53801618	53801693	.	+	0	Parent=FBgn0053198.1.mrna1;Target=FBgn0053198.1 1 76 +
Chr2	stalkie_big_nohaplotig	CDS	53801783	53801887	.	+	2	Parent=FBgn0053198.1.mrna1;Target=FBgn0053198.1 77 181 +
Chr2	stalkie_big_nohaplotig	CDS	53801950	53802086	.	+	2	Parent=FBgn0053198.1.mrna1;Target=FBgn0053198.1 182 318 +
Chr2	gffcl	locus	53802245	53803432	.	-	.	ID=RLOC_00017403;geneIDs=FBgn0053506.1.path1;transcripts=FBgn0053506.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53802245	53803432	.	-	.	ID=FBgn0053506.1.mrna1;geneID=FBgn0053506.1.path1;Name=FBgn0053506.1;Dir=sensecoverage=100.0;identity=99.4;matches=996;mismatches=5;indels=1;unknowns=0;locus=RLOC_00017403
Chr2	stalkie_big_nohaplotig	exon	53802245	53802580	99	-	.	Parent=FBgn0053506.1.mrna1;Target=FBgn0053506.1 667 1002 +
Chr2	stalkie_big_nohaplotig	exon	53802650	53802969	100	-	.	Parent=FBgn0053506.1.mrna1;Target=FBgn0053506.1 347 666 +
Chr2	stalkie_big_nohaplotig	exon	53803026	53803162	100	-	.	Parent=FBgn0053506.1.mrna1;Target=FBgn0053506.1 210 346 +
Chr2	stalkie_big_nohaplotig	exon	53803225	53803432	97	-	.	Parent=FBgn0053506.1.mrna1;Target=FBgn0053506.1 1 209 +
Chr2	stalkie_big_nohaplotig	CDS	53802245	53802580	.	-	0	Parent=FBgn0053506.1.mrna1;Target=FBgn0053506.1 667 1002 +
Chr2	stalkie_big_nohaplotig	CDS	53802650	53802969	.	-	2	Parent=FBgn0053506.1.mrna1;Target=FBgn0053506.1 347 666 +
Chr2	stalkie_big_nohaplotig	CDS	53803026	53803162	.	-	1	Parent=FBgn0053506.1.mrna1;Target=FBgn0053506.1 210 346 +
Chr2	stalkie_big_nohaplotig	CDS	53803225	53803409	.	-	0	Parent=FBgn0053506.1.mrna1;Target=FBgn0053506.1 25 209 +
Chr2	gffcl	locus	53807279	53807476	.	-	.	ID=RLOC_00017404;geneIDs=comp109410_c0_seq1.path1;transcripts=comp109410_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53807279	53807476	.	-	.	ID=comp109410_c0_seq1.mrna1;geneID=comp109410_c0_seq1.path1;Name=comp109410_c0_seq1;Dir=indeterminatecoverage=86.5;identity=99.0;matches=196;mismatches=2;indels=0;unknowns=0;Target=comp109410_c0_seq1 209 12 .;CDS_Target=comp109410_c0_seq1 66 13 .;locus=RLOC_00017404
Chr2	stalkie_big_nohaplotig	exon	53807279	53807476	98	-	.	Parent=comp109410_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	53807422	53807475	.	-	0	Parent=comp109410_c0_seq1.mrna1
Chr2	gffcl	locus	53808661	53809750	.	-	.	ID=RLOC_00017405;geneIDs=comp155373_c0_seq1.path1;transcripts=comp155373_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53808661	53809750	.	-	.	ID=comp155373_c0_seq1.mrna1;geneID=comp155373_c0_seq1.path1;Name=comp155373_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.1;matches=995;mismatches=58;indels=39;unknowns=0;Target=comp155373_c0_seq1 113 3 .;locus=RLOC_00017405
Chr2	stalkie_big_nohaplotig	exon	53808661	53808750	96	-	.	Parent=comp155373_c0_seq1.mrna1;Target=comp155373_c0_seq1 1065 977 .
Chr2	stalkie_big_nohaplotig	exon	53808761	53809750	90	-	.	Parent=comp155373_c0_seq1.mrna1;Target=comp155373_c0_seq1 976 1 .
Chr2	stalkie_big_nohaplotig	CDS	53809638	53809748	.	-	0	Parent=comp155373_c0_seq1.mrna1
Chr2	gffcl	locus	53815741	53831687	.	-	.	ID=RLOC_00017406;geneIDs=FBgn0010575.1.path1,comp161987_c2_seq1.path1;transcripts=FBgn0010575.1.mrna1,comp161987_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53815741	53822763	.	-	.	ID=FBgn0010575.1.mrna1;geneID=FBgn0010575.1.path1;Name=FBgn0010575.1;Dir=sensecoverage=100.0;identity=99.8;matches=5468;mismatches=10;indels=0;unknowns=0;locus=RLOC_00017406
Chr2	stalkie_big_nohaplotig	exon	53815741	53815981	99	-	.	Parent=FBgn0010575.1.mrna1;Target=FBgn0010575.1 5238 5478 +
Chr2	stalkie_big_nohaplotig	exon	53816058	53816305	100	-	.	Parent=FBgn0010575.1.mrna1;Target=FBgn0010575.1 4990 5237 +
Chr2	stalkie_big_nohaplotig	exon	53816362	53816581	98	-	.	Parent=FBgn0010575.1.mrna1;Target=FBgn0010575.1 4770 4989 +
Chr2	stalkie_big_nohaplotig	exon	53816640	53817204	99	-	.	Parent=FBgn0010575.1.mrna1;Target=FBgn0010575.1 4205 4769 +
Chr2	stalkie_big_nohaplotig	exon	53817270	53817449	100	-	.	Parent=FBgn0010575.1.mrna1;Target=FBgn0010575.1 4025 4204 +
Chr2	stalkie_big_nohaplotig	exon	53817512	53817769	100	-	.	Parent=FBgn0010575.1.mrna1;Target=FBgn0010575.1 3767 4024 +
Chr2	stalkie_big_nohaplotig	exon	53817841	53818960	99	-	.	Parent=FBgn0010575.1.mrna1;Target=FBgn0010575.1 2647 3766 +
Chr2	stalkie_big_nohaplotig	exon	53819028	53819145	100	-	.	Parent=FBgn0010575.1.mrna1;Target=FBgn0010575.1 2529 2646 +
Chr2	stalkie_big_nohaplotig	exon	53819629	53821969	99	-	.	Parent=FBgn0010575.1.mrna1;Target=FBgn0010575.1 188 2528 +
Chr2	stalkie_big_nohaplotig	exon	53822091	53822265	100	-	.	Parent=FBgn0010575.1.mrna1;Target=FBgn0010575.1 13 187 +
Chr2	stalkie_big_nohaplotig	exon	53822752	53822763	100	-	.	Parent=FBgn0010575.1.mrna1;Target=FBgn0010575.1 1 12 +
Chr2	stalkie_big_nohaplotig	CDS	53815741	53815981	.	-	1	Parent=FBgn0010575.1.mrna1;Target=FBgn0010575.1 5238 5478 +
Chr2	stalkie_big_nohaplotig	CDS	53816058	53816305	.	-	0	Parent=FBgn0010575.1.mrna1;Target=FBgn0010575.1 4990 5237 +
Chr2	stalkie_big_nohaplotig	CDS	53816362	53816581	.	-	1	Parent=FBgn0010575.1.mrna1;Target=FBgn0010575.1 4770 4989 +
Chr2	stalkie_big_nohaplotig	CDS	53816640	53817204	.	-	2	Parent=FBgn0010575.1.mrna1;Target=FBgn0010575.1 4205 4769 +
Chr2	stalkie_big_nohaplotig	CDS	53817270	53817449	.	-	2	Parent=FBgn0010575.1.mrna1;Target=FBgn0010575.1 4025 4204 +
Chr2	stalkie_big_nohaplotig	CDS	53817512	53817769	.	-	2	Parent=FBgn0010575.1.mrna1;Target=FBgn0010575.1 3767 4024 +
Chr2	stalkie_big_nohaplotig	CDS	53817841	53818960	.	-	0	Parent=FBgn0010575.1.mrna1;Target=FBgn0010575.1 2647 3766 +
Chr2	stalkie_big_nohaplotig	CDS	53819028	53819145	.	-	1	Parent=FBgn0010575.1.mrna1;Target=FBgn0010575.1 2529 2646 +
Chr2	stalkie_big_nohaplotig	CDS	53819629	53821969	.	-	2	Parent=FBgn0010575.1.mrna1;Target=FBgn0010575.1 188 2528 +
Chr2	stalkie_big_nohaplotig	CDS	53822091	53822265	.	-	0	Parent=FBgn0010575.1.mrna1;Target=FBgn0010575.1 13 187 +
Chr2	stalkie_big_nohaplotig	CDS	53822752	53822763	.	-	0	Parent=FBgn0010575.1.mrna1;Target=FBgn0010575.1 1 12 +
Chr2	stalkie_big_nohaplotig	mRNA	53815741	53831687	.	-	.	ID=comp161987_c2_seq1.mrna1;geneID=comp161987_c2_seq1.path1;Name=comp161987_c2_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=6435;mismatches=13;indels=2;unknowns=0;locus=RLOC_00017406
Chr2	stalkie_big_nohaplotig	exon	53815741	53815981	99	-	.	Parent=comp161987_c2_seq1.mrna1;Target=comp161987_c2_seq1 6212 6452 +
Chr2	stalkie_big_nohaplotig	exon	53816058	53816305	100	-	.	Parent=comp161987_c2_seq1.mrna1;Target=comp161987_c2_seq1 5964 6211 +
Chr2	stalkie_big_nohaplotig	exon	53816362	53816581	98	-	.	Parent=comp161987_c2_seq1.mrna1;Target=comp161987_c2_seq1 5744 5963 +
Chr2	stalkie_big_nohaplotig	exon	53816640	53817204	99	-	.	Parent=comp161987_c2_seq1.mrna1;Target=comp161987_c2_seq1 5179 5743 +
Chr2	stalkie_big_nohaplotig	exon	53817270	53817449	100	-	.	Parent=comp161987_c2_seq1.mrna1;Target=comp161987_c2_seq1 4999 5178 +
Chr2	stalkie_big_nohaplotig	exon	53817512	53817769	100	-	.	Parent=comp161987_c2_seq1.mrna1;Target=comp161987_c2_seq1 4741 4998 +
Chr2	stalkie_big_nohaplotig	exon	53817841	53818960	99	-	.	Parent=comp161987_c2_seq1.mrna1;Target=comp161987_c2_seq1 3621 4740 +
Chr2	stalkie_big_nohaplotig	exon	53819028	53819145	100	-	.	Parent=comp161987_c2_seq1.mrna1;Target=comp161987_c2_seq1 3503 3620 +
Chr2	stalkie_big_nohaplotig	exon	53819629	53821969	99	-	.	Parent=comp161987_c2_seq1.mrna1;Target=comp161987_c2_seq1 1162 3502 +
Chr2	stalkie_big_nohaplotig	exon	53822091	53822265	100	-	.	Parent=comp161987_c2_seq1.mrna1;Target=comp161987_c2_seq1 987 1161 +
Chr2	stalkie_big_nohaplotig	exon	53830706	53831687	99	-	.	Parent=comp161987_c2_seq1.mrna1;Target=comp161987_c2_seq1 3 986 +
Chr2	stalkie_big_nohaplotig	CDS	53815741	53815981	.	-	1	Parent=comp161987_c2_seq1.mrna1;Target=comp161987_c2_seq1 6212 6452 +
Chr2	stalkie_big_nohaplotig	CDS	53816058	53816305	.	-	0	Parent=comp161987_c2_seq1.mrna1;Target=comp161987_c2_seq1 5964 6211 +
Chr2	stalkie_big_nohaplotig	CDS	53816362	53816581	.	-	1	Parent=comp161987_c2_seq1.mrna1;Target=comp161987_c2_seq1 5744 5963 +
Chr2	stalkie_big_nohaplotig	CDS	53816640	53817204	.	-	2	Parent=comp161987_c2_seq1.mrna1;Target=comp161987_c2_seq1 5179 5743 +
Chr2	stalkie_big_nohaplotig	CDS	53817270	53817449	.	-	2	Parent=comp161987_c2_seq1.mrna1;Target=comp161987_c2_seq1 4999 5178 +
Chr2	stalkie_big_nohaplotig	CDS	53817512	53817769	.	-	2	Parent=comp161987_c2_seq1.mrna1;Target=comp161987_c2_seq1 4741 4998 +
Chr2	stalkie_big_nohaplotig	CDS	53817841	53818960	.	-	0	Parent=comp161987_c2_seq1.mrna1;Target=comp161987_c2_seq1 3621 4740 +
Chr2	stalkie_big_nohaplotig	CDS	53819028	53819145	.	-	1	Parent=comp161987_c2_seq1.mrna1;Target=comp161987_c2_seq1 3503 3620 +
Chr2	stalkie_big_nohaplotig	CDS	53819629	53821969	.	-	2	Parent=comp161987_c2_seq1.mrna1;Target=comp161987_c2_seq1 1162 3502 +
Chr2	stalkie_big_nohaplotig	CDS	53822091	53822265	.	-	0	Parent=comp161987_c2_seq1.mrna1;Target=comp161987_c2_seq1 987 1161 +
Chr2	stalkie_big_nohaplotig	CDS	53830706	53830720	.	-	0	Parent=comp161987_c2_seq1.mrna1;Target=comp161987_c2_seq1 972 986 +
Chr2	gffcl	locus	53922179	53922587	.	-	.	ID=RLOC_00017407;geneIDs=comp151796_c0_seq1.path1;transcripts=comp151796_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	53922179	53922587	.	-	.	ID=comp151796_c0_seq1.mrna1;geneID=comp151796_c0_seq1.path1;Name=comp151796_c0_seq1;Dir=indeterminatecoverage=99.8;identity=94.9;matches=388;mismatches=21;indels=0;unknowns=0;Target=comp151796_c0_seq1 410 2 .;CDS_Target=comp151796_c0_seq1 75 4 .;locus=RLOC_00017407
Chr2	stalkie_big_nohaplotig	exon	53922179	53922587	94	-	.	Parent=comp151796_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	53922514	53922585	.	-	0	Parent=comp151796_c0_seq1.mrna1
Chr2	gffcl	locus	54092417	54092624	.	+	.	ID=RLOC_00017408;geneIDs=comp148517_c0_seq1.path1;transcripts=comp148517_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54092417	54092624	.	+	.	ID=comp148517_c0_seq1.mrna1;geneID=comp148517_c0_seq1.path1;Name=comp148517_c0_seq1;Dir=indeterminatecoverage=95.5;identity=94.4;matches=202;mismatches=6;indels=6;unknowns=0;Target=comp148517_c0_seq1 224 11 .;CDS_Target=comp148517_c0_seq1 91 11 .;locus=RLOC_00017408
Chr2	stalkie_big_nohaplotig	exon	54092417	54092624	94	+	.	Parent=comp148517_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	54092417	54092491	.	+	0	Parent=comp148517_c0_seq1.mrna1
Chr2	gffcl	locus	54092951	54140813	.	+	.	ID=RLOC_00017409;geneIDs=comp148242_c0_seq1.path1;transcripts=comp148242_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54092951	54140813	.	+	.	ID=comp148242_c0_seq1.mrna1;geneID=comp148242_c0_seq1.path1;Name=comp148242_c0_seq1;Dir=indeterminatecoverage=89.3;identity=90.2;matches=506;mismatches=26;indels=29;unknowns=0;Target=comp148242_c0_seq1 92 60 .;locus=RLOC_00017409
Chr2	stalkie_big_nohaplotig	exon	54092951	54093389	95	+	.	Parent=comp148242_c0_seq1.mrna1;Target=comp148242_c0_seq1 443 2 .
Chr2	stalkie_big_nohaplotig	exon	54095428	54095431	100	+	.	Parent=comp148242_c0_seq1.mrna1;Target=comp148242_c0_seq1 447 444 .
Chr2	stalkie_big_nohaplotig	exon	54101630	54101638	100	+	.	Parent=comp148242_c0_seq1.mrna1;Target=comp148242_c0_seq1 456 448 .
Chr2	stalkie_big_nohaplotig	exon	54108938	54108950	84	+	.	Parent=comp148242_c0_seq1.mrna1;Target=comp148242_c0_seq1 469 457 .
Chr2	stalkie_big_nohaplotig	exon	54109195	54109202	100	+	.	Parent=comp148242_c0_seq1.mrna1;Target=comp148242_c0_seq1 477 470 .
Chr2	stalkie_big_nohaplotig	exon	54116446	54116471	72	+	.	Parent=comp148242_c0_seq1.mrna1;Target=comp148242_c0_seq1 505 478 .
Chr2	stalkie_big_nohaplotig	exon	54122768	54122808	43	+	.	Parent=comp148242_c0_seq1.mrna1;Target=comp148242_c0_seq1 526 506 .
Chr2	stalkie_big_nohaplotig	exon	54140731	54140738	100	+	.	Parent=comp148242_c0_seq1.mrna1;Target=comp148242_c0_seq1 599 592 .
Chr2	stalkie_big_nohaplotig	exon	54140809	54140813	100	+	.	Parent=comp148242_c0_seq1.mrna1;Target=comp148242_c0_seq1 604 600 .
Chr2	stalkie_big_nohaplotig	CDS	54093009	54093041	.	+	0	Parent=comp148242_c0_seq1.mrna1
Chr2	gffcl	locus	54109832	54110372	.	-	.	ID=RLOC_00017410;geneIDs=comp117116_c0_seq1.path1;transcripts=comp117116_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54109832	54110372	.	-	.	ID=comp117116_c0_seq1.mrna1;geneID=comp117116_c0_seq1.path1;Name=comp117116_c0_seq1;Dir=indeterminatecoverage=76.9;identity=94.0;matches=515;mismatches=25;indels=8;unknowns=0;Target=comp117116_c0_seq1 547 1 .;CDS_Target=comp117116_c0_seq1 327 184 .;locus=RLOC_00017410
Chr2	stalkie_big_nohaplotig	exon	54109832	54110372	93	-	.	Parent=comp117116_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	54110052	54110190	.	-	0	Parent=comp117116_c0_seq1.mrna1
Chr2	gffcl	locus	54176850	54177448	.	+	.	ID=RLOC_00017411;geneIDs=comp149231_c0_seq1.path1;transcripts=comp149231_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54176850	54177448	.	+	.	ID=comp149231_c0_seq1.mrna1;geneID=comp149231_c0_seq1.path1;Name=comp149231_c0_seq1;Dir=sensecoverage=96.4;identity=97.9;matches=505;mismatches=10;indels=1;unknowns=0;locus=RLOC_00017411
Chr2	stalkie_big_nohaplotig	exon	54176850	54177066	97	+	.	Parent=comp149231_c0_seq1.mrna1;Target=comp149231_c0_seq1 1 217 +
Chr2	stalkie_big_nohaplotig	exon	54177151	54177448	97	+	.	Parent=comp149231_c0_seq1.mrna1;Target=comp149231_c0_seq1 218 516 +
Chr2	stalkie_big_nohaplotig	CDS	54177055	54177066	.	+	0	Parent=comp149231_c0_seq1.mrna1;Target=comp149231_c0_seq1 206 217 +
Chr2	stalkie_big_nohaplotig	CDS	54177151	54177414	.	+	0	Parent=comp149231_c0_seq1.mrna1;Target=comp149231_c0_seq1 218 481 +
Chr2	gffcl	locus	54181472	54182102	.	+	.	ID=RLOC_00017412;geneIDs=comp58766_c0_seq1.path1;transcripts=comp58766_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54181472	54182102	.	+	.	ID=comp58766_c0_seq1.mrna1;geneID=comp58766_c0_seq1.path1;Name=comp58766_c0_seq1;Dir=antisensecoverage=96.3;identity=99.1;matches=566;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017412
Chr2	stalkie_big_nohaplotig	exon	54181472	54181595	99	+	.	Parent=comp58766_c0_seq1.mrna1;Target=comp58766_c0_seq1 470 593 -
Chr2	stalkie_big_nohaplotig	exon	54181656	54182102	99	+	.	Parent=comp58766_c0_seq1.mrna1;Target=comp58766_c0_seq1 23 469 -
Chr2	stalkie_big_nohaplotig	CDS	54181584	54181595	.	+	0	Parent=comp58766_c0_seq1.mrna1;Target=comp58766_c0_seq1 470 481 .
Chr2	stalkie_big_nohaplotig	CDS	54181656	54182006	.	+	0	Parent=comp58766_c0_seq1.mrna1;Target=comp58766_c0_seq1 119 469 .
Chr2	gffcl	locus	54184740	54185517	.	+	.	ID=RLOC_00017413;geneIDs=FBgn0035044.1.path1;transcripts=FBgn0035044.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54184740	54185517	.	+	.	ID=FBgn0035044.1.mrna1;geneID=FBgn0035044.1.path1;Name=FBgn0035044.1;Dir=sensecoverage=100.0;identity=100.0;matches=609;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017413
Chr2	stalkie_big_nohaplotig	exon	54184740	54184865	100	+	.	Parent=FBgn0035044.1.mrna1;Target=FBgn0035044.1 1 126 +
Chr2	stalkie_big_nohaplotig	exon	54184980	54185189	100	+	.	Parent=FBgn0035044.1.mrna1;Target=FBgn0035044.1 127 336 +
Chr2	stalkie_big_nohaplotig	exon	54185245	54185517	100	+	.	Parent=FBgn0035044.1.mrna1;Target=FBgn0035044.1 337 609 +
Chr2	stalkie_big_nohaplotig	CDS	54184740	54184865	.	+	0	Parent=FBgn0035044.1.mrna1;Target=FBgn0035044.1 1 126 +
Chr2	stalkie_big_nohaplotig	CDS	54184980	54185189	.	+	0	Parent=FBgn0035044.1.mrna1;Target=FBgn0035044.1 127 336 +
Chr2	stalkie_big_nohaplotig	CDS	54185245	54185517	.	+	0	Parent=FBgn0035044.1.mrna1;Target=FBgn0035044.1 337 609 +
Chr2	gffcl	locus	54185932	54186689	.	-	.	ID=RLOC_00017414;geneIDs=FBgn0261373.1.path1;transcripts=FBgn0261373.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54185932	54186689	.	-	.	ID=FBgn0261373.1.mrna1;geneID=FBgn0261373.1.path1;Name=FBgn0261373.1;Dir=sensecoverage=100.0;identity=98.4;matches=635;mismatches=10;indels=0;unknowns=0;locus=RLOC_00017414
Chr2	stalkie_big_nohaplotig	exon	54185932	54186127	99	-	.	Parent=FBgn0261373.1.mrna1;Target=FBgn0261373.1 450 645 +
Chr2	stalkie_big_nohaplotig	exon	54186184	54186546	98	-	.	Parent=FBgn0261373.1.mrna1;Target=FBgn0261373.1 87 449 +
Chr2	stalkie_big_nohaplotig	exon	54186604	54186689	96	-	.	Parent=FBgn0261373.1.mrna1;Target=FBgn0261373.1 1 86 +
Chr2	stalkie_big_nohaplotig	CDS	54185932	54186127	.	-	1	Parent=FBgn0261373.1.mrna1;Target=FBgn0261373.1 450 645 +
Chr2	stalkie_big_nohaplotig	CDS	54186184	54186546	.	-	1	Parent=FBgn0261373.1.mrna1;Target=FBgn0261373.1 87 449 +
Chr2	stalkie_big_nohaplotig	CDS	54186604	54186689	.	-	0	Parent=FBgn0261373.1.mrna1;Target=FBgn0261373.1 1 86 +
Chr2	gffcl	locus	54186976	54188531	.	+	.	ID=RLOC_00017415;geneIDs=FBgn0035047.1.path1;transcripts=FBgn0035047.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54186976	54188531	.	+	.	ID=FBgn0035047.1.mrna1;geneID=FBgn0035047.1.path1;Name=FBgn0035047.1;Dir=sensecoverage=100.0;identity=99.3;matches=1379;mismatches=10;indels=0;unknowns=0;locus=RLOC_00017415
Chr2	stalkie_big_nohaplotig	exon	54186976	54187084	99	+	.	Parent=FBgn0035047.1.mrna1;Target=FBgn0035047.1 1 109 +
Chr2	stalkie_big_nohaplotig	exon	54187138	54188016	99	+	.	Parent=FBgn0035047.1.mrna1;Target=FBgn0035047.1 110 988 +
Chr2	stalkie_big_nohaplotig	exon	54188071	54188223	99	+	.	Parent=FBgn0035047.1.mrna1;Target=FBgn0035047.1 989 1141 +
Chr2	stalkie_big_nohaplotig	exon	54188284	54188531	99	+	.	Parent=FBgn0035047.1.mrna1;Target=FBgn0035047.1 1142 1389 +
Chr2	stalkie_big_nohaplotig	CDS	54186976	54187084	.	+	0	Parent=FBgn0035047.1.mrna1;Target=FBgn0035047.1 1 109 +
Chr2	stalkie_big_nohaplotig	CDS	54187138	54188016	.	+	2	Parent=FBgn0035047.1.mrna1;Target=FBgn0035047.1 110 988 +
Chr2	stalkie_big_nohaplotig	CDS	54188071	54188223	.	+	2	Parent=FBgn0035047.1.mrna1;Target=FBgn0035047.1 989 1141 +
Chr2	stalkie_big_nohaplotig	CDS	54188284	54188531	.	+	2	Parent=FBgn0035047.1.mrna1;Target=FBgn0035047.1 1142 1389 +
Chr2	gffcl	locus	54190783	54193932	.	+	.	ID=RLOC_00017416;geneIDs=FBgn0039139.1.path1;transcripts=FBgn0039139.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54190783	54193932	.	+	.	ID=FBgn0039139.1.mrna1;geneID=FBgn0039139.1.path1;Name=FBgn0039139.1;Dir=sensecoverage=100.0;identity=99.5;matches=2003;mismatches=10;indels=0;unknowns=0;locus=RLOC_00017416
Chr2	stalkie_big_nohaplotig	exon	54190783	54190996	100	+	.	Parent=FBgn0039139.1.mrna1;Target=FBgn0039139.1 1 214 +
Chr2	stalkie_big_nohaplotig	exon	54191061	54191366	99	+	.	Parent=FBgn0039139.1.mrna1;Target=FBgn0039139.1 215 520 +
Chr2	stalkie_big_nohaplotig	exon	54191426	54191553	100	+	.	Parent=FBgn0039139.1.mrna1;Target=FBgn0039139.1 521 648 +
Chr2	stalkie_big_nohaplotig	exon	54191609	54192198	98	+	.	Parent=FBgn0039139.1.mrna1;Target=FBgn0039139.1 649 1238 +
Chr2	stalkie_big_nohaplotig	exon	54192273	54192413	99	+	.	Parent=FBgn0039139.1.mrna1;Target=FBgn0039139.1 1239 1379 +
Chr2	stalkie_big_nohaplotig	exon	54192470	54192552	100	+	.	Parent=FBgn0039139.1.mrna1;Target=FBgn0039139.1 1380 1462 +
Chr2	stalkie_big_nohaplotig	exon	54193325	54193448	100	+	.	Parent=FBgn0039139.1.mrna1;Target=FBgn0039139.1 1463 1586 +
Chr2	stalkie_big_nohaplotig	exon	54193506	54193932	99	+	.	Parent=FBgn0039139.1.mrna1;Target=FBgn0039139.1 1587 2013 +
Chr2	stalkie_big_nohaplotig	CDS	54190783	54190996	.	+	0	Parent=FBgn0039139.1.mrna1;Target=FBgn0039139.1 1 214 +
Chr2	stalkie_big_nohaplotig	CDS	54191061	54191366	.	+	2	Parent=FBgn0039139.1.mrna1;Target=FBgn0039139.1 215 520 +
Chr2	stalkie_big_nohaplotig	CDS	54191426	54191553	.	+	2	Parent=FBgn0039139.1.mrna1;Target=FBgn0039139.1 521 648 +
Chr2	stalkie_big_nohaplotig	CDS	54191609	54192198	.	+	0	Parent=FBgn0039139.1.mrna1;Target=FBgn0039139.1 649 1238 +
Chr2	stalkie_big_nohaplotig	CDS	54192273	54192413	.	+	1	Parent=FBgn0039139.1.mrna1;Target=FBgn0039139.1 1239 1379 +
Chr2	stalkie_big_nohaplotig	CDS	54192470	54192552	.	+	1	Parent=FBgn0039139.1.mrna1;Target=FBgn0039139.1 1380 1462 +
Chr2	stalkie_big_nohaplotig	CDS	54193325	54193448	.	+	2	Parent=FBgn0039139.1.mrna1;Target=FBgn0039139.1 1463 1586 +
Chr2	stalkie_big_nohaplotig	CDS	54193506	54193932	.	+	1	Parent=FBgn0039139.1.mrna1;Target=FBgn0039139.1 1587 2013 +
Chr2	gffcl	locus	54215051	54227568	.	+	.	ID=RLOC_00017419;geneIDs=FBgn0033194.1.path1;transcripts=FBgn0033194.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54215051	54227568	.	+	.	ID=FBgn0033194.1.mrna1;geneID=FBgn0033194.1.path1;Name=FBgn0033194.1;Dir=sensecoverage=98.4;identity=99.5;matches=7668;mismatches=39;indels=0;unknowns=0;locus=RLOC_00017419
Chr2	stalkie_big_nohaplotig	exon	54215051	54215139	98	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 123 211 +
Chr2	stalkie_big_nohaplotig	exon	54215197	54215394	100	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 212 409 +
Chr2	stalkie_big_nohaplotig	exon	54215464	54215829	99	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 410 775 +
Chr2	stalkie_big_nohaplotig	exon	54215883	54216104	99	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 776 997 +
Chr2	stalkie_big_nohaplotig	exon	54216173	54216309	100	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 998 1134 +
Chr2	stalkie_big_nohaplotig	exon	54217229	54217469	99	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 1135 1375 +
Chr2	stalkie_big_nohaplotig	exon	54217537	54217810	98	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 1376 1649 +
Chr2	stalkie_big_nohaplotig	exon	54217868	54218453	100	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 1650 2235 +
Chr2	stalkie_big_nohaplotig	exon	54218633	54219276	99	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 2236 2879 +
Chr2	stalkie_big_nohaplotig	exon	54219372	54219999	99	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 2880 3507 +
Chr2	stalkie_big_nohaplotig	exon	54220064	54220219	100	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 3508 3663 +
Chr2	stalkie_big_nohaplotig	exon	54221022	54221391	99	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 3664 4033 +
Chr2	stalkie_big_nohaplotig	exon	54221465	54221610	100	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 4034 4179 +
Chr2	stalkie_big_nohaplotig	exon	54221684	54221948	97	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 4180 4444 +
Chr2	stalkie_big_nohaplotig	exon	54222018	54222287	100	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 4445 4714 +
Chr2	stalkie_big_nohaplotig	exon	54222349	54222495	99	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 4715 4861 +
Chr2	stalkie_big_nohaplotig	exon	54222568	54222692	98	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 4862 4986 +
Chr2	stalkie_big_nohaplotig	exon	54222747	54223119	99	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 4987 5359 +
Chr2	stalkie_big_nohaplotig	exon	54223174	54223952	99	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 5360 6138 +
Chr2	stalkie_big_nohaplotig	exon	54224309	54224467	99	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 6139 6297 +
Chr2	stalkie_big_nohaplotig	exon	54224558	54224713	99	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 6298 6453 +
Chr2	stalkie_big_nohaplotig	exon	54225029	54225475	99	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 6454 6900 +
Chr2	stalkie_big_nohaplotig	exon	54225635	54225765	98	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 6901 7031 +
Chr2	stalkie_big_nohaplotig	exon	54225874	54226162	100	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 7032 7320 +
Chr2	stalkie_big_nohaplotig	exon	54226235	54226372	100	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 7321 7458 +
Chr2	stalkie_big_nohaplotig	exon	54226532	54226672	100	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 7459 7599 +
Chr2	stalkie_big_nohaplotig	exon	54227339	54227568	97	+	.	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 7600 7829 +
Chr2	stalkie_big_nohaplotig	CDS	54215052	54215139	.	+	0	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 124 211 +
Chr2	stalkie_big_nohaplotig	CDS	54215197	54215394	.	+	2	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 212 409 +
Chr2	stalkie_big_nohaplotig	CDS	54215464	54215829	.	+	2	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 410 775 +
Chr2	stalkie_big_nohaplotig	CDS	54215883	54216104	.	+	2	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 776 997 +
Chr2	stalkie_big_nohaplotig	CDS	54216173	54216309	.	+	2	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 998 1134 +
Chr2	stalkie_big_nohaplotig	CDS	54217229	54217469	.	+	0	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 1135 1375 +
Chr2	stalkie_big_nohaplotig	CDS	54217537	54217810	.	+	2	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 1376 1649 +
Chr2	stalkie_big_nohaplotig	CDS	54217868	54218453	.	+	1	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 1650 2235 +
Chr2	stalkie_big_nohaplotig	CDS	54218633	54219276	.	+	0	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 2236 2879 +
Chr2	stalkie_big_nohaplotig	CDS	54219372	54219999	.	+	1	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 2880 3507 +
Chr2	stalkie_big_nohaplotig	CDS	54220064	54220219	.	+	0	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 3508 3663 +
Chr2	stalkie_big_nohaplotig	CDS	54221022	54221391	.	+	0	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 3664 4033 +
Chr2	stalkie_big_nohaplotig	CDS	54221465	54221610	.	+	2	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 4034 4179 +
Chr2	stalkie_big_nohaplotig	CDS	54221684	54221948	.	+	0	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 4180 4444 +
Chr2	stalkie_big_nohaplotig	CDS	54222018	54222287	.	+	2	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 4445 4714 +
Chr2	stalkie_big_nohaplotig	CDS	54222349	54222495	.	+	2	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 4715 4861 +
Chr2	stalkie_big_nohaplotig	CDS	54222568	54222692	.	+	2	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 4862 4986 +
Chr2	stalkie_big_nohaplotig	CDS	54222747	54223119	.	+	0	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 4987 5359 +
Chr2	stalkie_big_nohaplotig	CDS	54223174	54223952	.	+	2	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 5360 6138 +
Chr2	stalkie_big_nohaplotig	CDS	54224309	54224467	.	+	0	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 6139 6297 +
Chr2	stalkie_big_nohaplotig	CDS	54224558	54224713	.	+	0	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 6298 6453 +
Chr2	stalkie_big_nohaplotig	CDS	54225029	54225475	.	+	0	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 6454 6900 +
Chr2	stalkie_big_nohaplotig	CDS	54225635	54225765	.	+	0	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 6901 7031 +
Chr2	stalkie_big_nohaplotig	CDS	54225874	54226162	.	+	1	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 7032 7320 +
Chr2	stalkie_big_nohaplotig	CDS	54226235	54226372	.	+	0	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 7321 7458 +
Chr2	stalkie_big_nohaplotig	CDS	54226532	54226672	.	+	0	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 7459 7599 +
Chr2	stalkie_big_nohaplotig	CDS	54227339	54227566	.	+	0	Parent=FBgn0033194.1.mrna1;Target=FBgn0033194.1 7600 7827 +
Chr2	gffcl	locus	54232279	54238938	.	-	.	ID=RLOC_00017420;geneIDs=FBgn0004133.1.path1;transcripts=FBgn0004133.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54232279	54238938	.	-	.	ID=FBgn0004133.1.mrna1;geneID=FBgn0004133.1.path1;Name=FBgn0004133.1;Dir=sensecoverage=100.0;identity=99.3;matches=2053;mismatches=14;indels=0;unknowns=0;locus=RLOC_00017420
Chr2	stalkie_big_nohaplotig	exon	54232279	54234002	99	-	.	Parent=FBgn0004133.1.mrna1;Target=FBgn0004133.1 344 2067 +
Chr2	stalkie_big_nohaplotig	exon	54234060	54234323	100	-	.	Parent=FBgn0004133.1.mrna1;Target=FBgn0004133.1 80 343 +
Chr2	stalkie_big_nohaplotig	exon	54238860	54238938	100	-	.	Parent=FBgn0004133.1.mrna1;Target=FBgn0004133.1 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	54232279	54234002	.	-	2	Parent=FBgn0004133.1.mrna1;Target=FBgn0004133.1 344 2067 +
Chr2	stalkie_big_nohaplotig	CDS	54234060	54234323	.	-	2	Parent=FBgn0004133.1.mrna1;Target=FBgn0004133.1 80 343 +
Chr2	stalkie_big_nohaplotig	CDS	54238860	54238938	.	-	0	Parent=FBgn0004133.1.mrna1;Target=FBgn0004133.1 1 79 +
Chr2	gffcl	locus	54239377	54249772	.	-	.	ID=RLOC_00017421;geneIDs=comp150591_c0_seq1.path1;transcripts=comp150591_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54239377	54249772	.	-	.	ID=comp150591_c0_seq1.mrna1;geneID=comp150591_c0_seq1.path1;Name=comp150591_c0_seq1;Dir=antisensecoverage=99.9;identity=97.7;matches=679;mismatches=2;indels=14;unknowns=0;Target=comp150591_c0_seq1 637 681 .;locus=RLOC_00017421
Chr2	stalkie_big_nohaplotig	exon	54239377	54239879	97	-	.	Parent=comp150591_c0_seq1.mrna1;Target=comp150591_c0_seq1 2 516 -
Chr2	stalkie_big_nohaplotig	exon	54249594	54249772	99	-	.	Parent=comp150591_c0_seq1.mrna1;Target=comp150591_c0_seq1 517 695 -
Chr2	stalkie_big_nohaplotig	CDS	54249714	54249758	.	-	0	Parent=comp150591_c0_seq1.mrna1
Chr2	gffcl	locus	54256744	54257633	.	-	.	ID=RLOC_00017422;geneIDs=comp154379_c0_seq1.path1;transcripts=comp154379_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54256744	54257633	.	-	.	ID=comp154379_c0_seq1.mrna1;geneID=comp154379_c0_seq1.path1;Name=comp154379_c0_seq1;Dir=antisensecoverage=100.0;identity=98.3;matches=741;mismatches=13;indels=0;unknowns=0;locus=RLOC_00017422
Chr2	stalkie_big_nohaplotig	exon	54256744	54257027	98	-	.	Parent=comp154379_c0_seq1.mrna1;Target=comp154379_c0_seq1 1 284 -
Chr2	stalkie_big_nohaplotig	exon	54257091	54257355	98	-	.	Parent=comp154379_c0_seq1.mrna1;Target=comp154379_c0_seq1 285 549 -
Chr2	stalkie_big_nohaplotig	exon	54257429	54257633	97	-	.	Parent=comp154379_c0_seq1.mrna1;Target=comp154379_c0_seq1 550 754 -
Chr2	stalkie_big_nohaplotig	CDS	54256746	54257027	.	-	0	Parent=comp154379_c0_seq1.mrna1;Target=comp154379_c0_seq1 3 284 .
Chr2	stalkie_big_nohaplotig	CDS	54257091	54257355	.	-	1	Parent=comp154379_c0_seq1.mrna1;Target=comp154379_c0_seq1 285 549 .
Chr2	stalkie_big_nohaplotig	CDS	54257429	54257529	.	-	0	Parent=comp154379_c0_seq1.mrna1;Target=comp154379_c0_seq1 550 650 .
Chr2	gffcl	locus	54259170	54259624	.	+	.	ID=RLOC_00017423;geneIDs=FBgn0261385.1.path1;transcripts=FBgn0261385.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54259170	54259624	.	+	.	ID=FBgn0261385.1.mrna1;geneID=FBgn0261385.1.path1;Name=FBgn0261385.1;Dir=sensecoverage=9.3;identity=98.3;matches=354;mismatches=6;indels=0;unknowns=0;locus=RLOC_00017423
Chr2	stalkie_big_nohaplotig	exon	54259170	54259202	100	+	.	Parent=FBgn0261385.1.mrna1;Target=FBgn0261385.1 1 33 +
Chr2	stalkie_big_nohaplotig	exon	54259298	54259624	98	+	.	Parent=FBgn0261385.1.mrna1;Target=FBgn0261385.1 34 360 +
Chr2	stalkie_big_nohaplotig	CDS	54259170	54259202	.	+	0	Parent=FBgn0261385.1.mrna1;Target=FBgn0261385.1 1 33 +
Chr2	stalkie_big_nohaplotig	CDS	54259298	54259624	.	+	0	Parent=FBgn0261385.1.mrna1;Target=FBgn0261385.1 34 360 +
Chr2	gffcl	locus	54273383	54278647	.	+	.	ID=RLOC_00017424;geneIDs=FBgn0050047.1.path1;transcripts=FBgn0050047.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54273383	54278647	.	+	.	ID=FBgn0050047.1.mrna1;geneID=FBgn0050047.1.path1;Name=FBgn0050047.1;Dir=sensecoverage=100.0;identity=99.6;matches=1946;mismatches=7;indels=0;unknowns=0;locus=RLOC_00017424
Chr2	stalkie_big_nohaplotig	exon	54273383	54273417	100	+	.	Parent=FBgn0050047.1.mrna1;Target=FBgn0050047.1 1 35 +
Chr2	stalkie_big_nohaplotig	exon	54273498	54273582	96	+	.	Parent=FBgn0050047.1.mrna1;Target=FBgn0050047.1 36 120 +
Chr2	stalkie_big_nohaplotig	exon	54276177	54276297	100	+	.	Parent=FBgn0050047.1.mrna1;Target=FBgn0050047.1 121 241 +
Chr2	stalkie_big_nohaplotig	exon	54276359	54276513	100	+	.	Parent=FBgn0050047.1.mrna1;Target=FBgn0050047.1 242 396 +
Chr2	stalkie_big_nohaplotig	exon	54276582	54276965	100	+	.	Parent=FBgn0050047.1.mrna1;Target=FBgn0050047.1 397 780 +
Chr2	stalkie_big_nohaplotig	exon	54277022	54277202	99	+	.	Parent=FBgn0050047.1.mrna1;Target=FBgn0050047.1 781 961 +
Chr2	stalkie_big_nohaplotig	exon	54277268	54277452	100	+	.	Parent=FBgn0050047.1.mrna1;Target=FBgn0050047.1 962 1146 +
Chr2	stalkie_big_nohaplotig	exon	54277516	54277659	100	+	.	Parent=FBgn0050047.1.mrna1;Target=FBgn0050047.1 1147 1290 +
Chr2	stalkie_big_nohaplotig	exon	54277811	54277913	100	+	.	Parent=FBgn0050047.1.mrna1;Target=FBgn0050047.1 1291 1393 +
Chr2	stalkie_big_nohaplotig	exon	54277980	54278374	99	+	.	Parent=FBgn0050047.1.mrna1;Target=FBgn0050047.1 1394 1788 +
Chr2	stalkie_big_nohaplotig	exon	54278483	54278647	100	+	.	Parent=FBgn0050047.1.mrna1;Target=FBgn0050047.1 1789 1953 +
Chr2	stalkie_big_nohaplotig	CDS	54273383	54273417	.	+	0	Parent=FBgn0050047.1.mrna1;Target=FBgn0050047.1 1 35 +
Chr2	stalkie_big_nohaplotig	CDS	54273498	54273582	.	+	1	Parent=FBgn0050047.1.mrna1;Target=FBgn0050047.1 36 120 +
Chr2	stalkie_big_nohaplotig	CDS	54276177	54276297	.	+	0	Parent=FBgn0050047.1.mrna1;Target=FBgn0050047.1 121 241 +
Chr2	stalkie_big_nohaplotig	CDS	54276359	54276513	.	+	2	Parent=FBgn0050047.1.mrna1;Target=FBgn0050047.1 242 396 +
Chr2	stalkie_big_nohaplotig	CDS	54276582	54276965	.	+	0	Parent=FBgn0050047.1.mrna1;Target=FBgn0050047.1 397 780 +
Chr2	stalkie_big_nohaplotig	CDS	54277022	54277202	.	+	0	Parent=FBgn0050047.1.mrna1;Target=FBgn0050047.1 781 961 +
Chr2	stalkie_big_nohaplotig	CDS	54277268	54277452	.	+	2	Parent=FBgn0050047.1.mrna1;Target=FBgn0050047.1 962 1146 +
Chr2	stalkie_big_nohaplotig	CDS	54277516	54277659	.	+	0	Parent=FBgn0050047.1.mrna1;Target=FBgn0050047.1 1147 1290 +
Chr2	stalkie_big_nohaplotig	CDS	54277811	54277913	.	+	0	Parent=FBgn0050047.1.mrna1;Target=FBgn0050047.1 1291 1393 +
Chr2	stalkie_big_nohaplotig	CDS	54277980	54278374	.	+	2	Parent=FBgn0050047.1.mrna1;Target=FBgn0050047.1 1394 1788 +
Chr2	stalkie_big_nohaplotig	CDS	54278483	54278647	.	+	0	Parent=FBgn0050047.1.mrna1;Target=FBgn0050047.1 1789 1953 +
Chr2	gffcl	locus	54279186	54284565	.	-	.	ID=RLOC_00017425;geneIDs=FBgn0034397.1.path1;transcripts=FBgn0034397.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54279186	54284565	.	-	.	ID=FBgn0034397.1.mrna1;geneID=FBgn0034397.1.path1;Name=FBgn0034397.1;Dir=sensecoverage=100.0;identity=98.7;matches=631;mismatches=8;indels=0;unknowns=0;locus=RLOC_00017425
Chr2	stalkie_big_nohaplotig	exon	54279186	54279502	98	-	.	Parent=FBgn0034397.1.mrna1;Target=FBgn0034397.1 323 639 +
Chr2	stalkie_big_nohaplotig	exon	54284244	54284565	99	-	.	Parent=FBgn0034397.1.mrna1;Target=FBgn0034397.1 1 322 +
Chr2	stalkie_big_nohaplotig	CDS	54279186	54279502	.	-	2	Parent=FBgn0034397.1.mrna1;Target=FBgn0034397.1 323 639 +
Chr2	stalkie_big_nohaplotig	CDS	54284244	54284565	.	-	0	Parent=FBgn0034397.1.mrna1;Target=FBgn0034397.1 1 322 +
Chr2	gffcl	locus	54339173	54356639	.	+	.	ID=RLOC_00017426;geneIDs=FBgn0034396.1.path1;transcripts=FBgn0034396.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54339173	54356639	.	+	.	ID=FBgn0034396.1.mrna1;geneID=FBgn0034396.1.path1;Name=FBgn0034396.1;Dir=sensecoverage=100.0;identity=100.0;matches=1857;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017426
Chr2	stalkie_big_nohaplotig	exon	54339173	54339204	100	+	.	Parent=FBgn0034396.1.mrna1;Target=FBgn0034396.1 1 32 +
Chr2	stalkie_big_nohaplotig	exon	54343056	54343239	100	+	.	Parent=FBgn0034396.1.mrna1;Target=FBgn0034396.1 33 216 +
Chr2	stalkie_big_nohaplotig	exon	54353436	54353532	100	+	.	Parent=FBgn0034396.1.mrna1;Target=FBgn0034396.1 217 313 +
Chr2	stalkie_big_nohaplotig	exon	54353628	54353864	100	+	.	Parent=FBgn0034396.1.mrna1;Target=FBgn0034396.1 314 550 +
Chr2	stalkie_big_nohaplotig	exon	54355216	54355322	100	+	.	Parent=FBgn0034396.1.mrna1;Target=FBgn0034396.1 551 657 +
Chr2	stalkie_big_nohaplotig	exon	54355373	54356361	100	+	.	Parent=FBgn0034396.1.mrna1;Target=FBgn0034396.1 658 1646 +
Chr2	stalkie_big_nohaplotig	exon	54356429	54356639	100	+	.	Parent=FBgn0034396.1.mrna1;Target=FBgn0034396.1 1647 1857 +
Chr2	stalkie_big_nohaplotig	CDS	54339173	54339204	.	+	0	Parent=FBgn0034396.1.mrna1;Target=FBgn0034396.1 1 32 +
Chr2	stalkie_big_nohaplotig	CDS	54343056	54343239	.	+	1	Parent=FBgn0034396.1.mrna1;Target=FBgn0034396.1 33 216 +
Chr2	stalkie_big_nohaplotig	CDS	54353436	54353532	.	+	0	Parent=FBgn0034396.1.mrna1;Target=FBgn0034396.1 217 313 +
Chr2	stalkie_big_nohaplotig	CDS	54353628	54353864	.	+	2	Parent=FBgn0034396.1.mrna1;Target=FBgn0034396.1 314 550 +
Chr2	stalkie_big_nohaplotig	CDS	54355216	54355322	.	+	2	Parent=FBgn0034396.1.mrna1;Target=FBgn0034396.1 551 657 +
Chr2	stalkie_big_nohaplotig	CDS	54355373	54356361	.	+	0	Parent=FBgn0034396.1.mrna1;Target=FBgn0034396.1 658 1646 +
Chr2	stalkie_big_nohaplotig	CDS	54356429	54356639	.	+	1	Parent=FBgn0034396.1.mrna1;Target=FBgn0034396.1 1647 1857 +
Chr2	gffcl	locus	54359736	54363124	.	-	.	ID=RLOC_00017427;geneIDs=FBgn0010551.1.path1,comp153750_c0_seq1.path1;transcripts=FBgn0010551.1.mrna1,comp153750_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54359736	54363124	.	-	.	ID=FBgn0010551.1.mrna1;geneID=FBgn0010551.1.path1;Name=FBgn0010551.1;Dir=sensecoverage=99.8;identity=100.0;matches=1003;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017427
Chr2	stalkie_big_nohaplotig	exon	54359736	54359842	100	-	.	Parent=FBgn0010551.1.mrna1;Target=FBgn0010551.1 899 1005 +
Chr2	stalkie_big_nohaplotig	exon	54360755	54360854	100	-	.	Parent=FBgn0010551.1.mrna1;Target=FBgn0010551.1 799 898 +
Chr2	stalkie_big_nohaplotig	exon	54360927	54361004	100	-	.	Parent=FBgn0010551.1.mrna1;Target=FBgn0010551.1 721 798 +
Chr2	stalkie_big_nohaplotig	exon	54361945	54362178	100	-	.	Parent=FBgn0010551.1.mrna1;Target=FBgn0010551.1 487 720 +
Chr2	stalkie_big_nohaplotig	exon	54362234	54362580	100	-	.	Parent=FBgn0010551.1.mrna1;Target=FBgn0010551.1 140 486 +
Chr2	stalkie_big_nohaplotig	exon	54362988	54363124	100	-	.	Parent=FBgn0010551.1.mrna1;Target=FBgn0010551.1 3 139 +
Chr2	stalkie_big_nohaplotig	CDS	54359736	54359842	.	-	2	Parent=FBgn0010551.1.mrna1;Target=FBgn0010551.1 899 1005 +
Chr2	stalkie_big_nohaplotig	CDS	54360755	54360854	.	-	0	Parent=FBgn0010551.1.mrna1;Target=FBgn0010551.1 799 898 +
Chr2	stalkie_big_nohaplotig	CDS	54360927	54361004	.	-	0	Parent=FBgn0010551.1.mrna1;Target=FBgn0010551.1 721 798 +
Chr2	stalkie_big_nohaplotig	CDS	54361945	54362178	.	-	0	Parent=FBgn0010551.1.mrna1;Target=FBgn0010551.1 487 720 +
Chr2	stalkie_big_nohaplotig	CDS	54362234	54362580	.	-	2	Parent=FBgn0010551.1.mrna1;Target=FBgn0010551.1 140 486 +
Chr2	stalkie_big_nohaplotig	CDS	54362988	54363123	.	-	0	Parent=FBgn0010551.1.mrna1;Target=FBgn0010551.1 4 139 +
Chr2	stalkie_big_nohaplotig	mRNA	54360981	54361968	.	-	.	ID=comp153750_c0_seq1.mrna1;geneID=comp153750_c0_seq1.path1;Name=comp153750_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=979;mismatches=9;indels=1;unknowns=0;Target=comp153750_c0_seq1 989 1 .;CDS_Target=comp153750_c0_seq1 534 511 .;locus=RLOC_00017427
Chr2	stalkie_big_nohaplotig	exon	54360981	54361968	98	-	.	Parent=comp153750_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	54361436	54361458	.	-	0	Parent=comp153750_c0_seq1.mrna1
Chr2	gffcl	locus	54360001	54360328	.	+	.	ID=RLOC_00017428;geneIDs=comp146573_c0_seq1.path1;transcripts=comp146573_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54360001	54360328	.	+	.	ID=comp146573_c0_seq1.mrna1;geneID=comp146573_c0_seq1.path1;Name=comp146573_c0_seq1;Dir=indeterminatecoverage=88.6;identity=99.4;matches=326;mismatches=2;indels=0;unknowns=0;Target=comp146573_c0_seq1 352 25 .;CDS_Target=comp146573_c0_seq1 118 62 .;locus=RLOC_00017428
Chr2	stalkie_big_nohaplotig	exon	54360001	54360328	99	+	.	Parent=comp146573_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	54360038	54360094	.	+	0	Parent=comp146573_c0_seq1.mrna1
Chr2	gffcl	locus	54363581	54422782	.	+	.	ID=RLOC_00017429;geneIDs=comp814525_c0_seq1.path1;transcripts=comp814525_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54363581	54422782	.	+	.	ID=comp814525_c0_seq1.mrna1;geneID=comp814525_c0_seq1.path1;Name=comp814525_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=588;mismatches=0;indels=1;unknowns=0;Target=comp814525_c0_seq1 92 223 +;locus=RLOC_00017429
Chr2	stalkie_big_nohaplotig	exon	54363581	54363825	100	+	.	Parent=comp814525_c0_seq1.mrna1;Target=comp814525_c0_seq1 1 245 +
Chr2	stalkie_big_nohaplotig	exon	54421417	54421736	99	+	.	Parent=comp814525_c0_seq1.mrna1;Target=comp814525_c0_seq1 246 564 +
Chr2	stalkie_big_nohaplotig	exon	54422759	54422782	100	+	.	Parent=comp814525_c0_seq1.mrna1;Target=comp814525_c0_seq1 565 588 +
Chr2	stalkie_big_nohaplotig	CDS	54363672	54363803	.	+	0	Parent=comp814525_c0_seq1.mrna1
Chr2	gffcl	locus	54364060	54371459	.	-	.	ID=RLOC_00017430;geneIDs=FBgn0034786.1.path1;transcripts=FBgn0034786.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54364060	54371459	.	-	.	ID=FBgn0034786.1.mrna1;geneID=FBgn0034786.1.path1;Name=FBgn0034786.1;Dir=sensecoverage=100.0;identity=99.6;matches=5560;mismatches=20;indels=0;unknowns=0;locus=RLOC_00017430
Chr2	stalkie_big_nohaplotig	exon	54364060	54364276	99	-	.	Parent=FBgn0034786.1.mrna1;Target=FBgn0034786.1 5364 5580 +
Chr2	stalkie_big_nohaplotig	exon	54364343	54364504	100	-	.	Parent=FBgn0034786.1.mrna1;Target=FBgn0034786.1 5202 5363 +
Chr2	stalkie_big_nohaplotig	exon	54364579	54365705	99	-	.	Parent=FBgn0034786.1.mrna1;Target=FBgn0034786.1 4075 5201 +
Chr2	stalkie_big_nohaplotig	exon	54365762	54366084	99	-	.	Parent=FBgn0034786.1.mrna1;Target=FBgn0034786.1 3752 4074 +
Chr2	stalkie_big_nohaplotig	exon	54367461	54368625	99	-	.	Parent=FBgn0034786.1.mrna1;Target=FBgn0034786.1 2587 3751 +
Chr2	stalkie_big_nohaplotig	exon	54368692	54369171	100	-	.	Parent=FBgn0034786.1.mrna1;Target=FBgn0034786.1 2107 2586 +
Chr2	stalkie_big_nohaplotig	exon	54369246	54370208	99	-	.	Parent=FBgn0034786.1.mrna1;Target=FBgn0034786.1 1144 2106 +
Chr2	stalkie_big_nohaplotig	exon	54370263	54370460	99	-	.	Parent=FBgn0034786.1.mrna1;Target=FBgn0034786.1 946 1143 +
Chr2	stalkie_big_nohaplotig	exon	54370515	54371459	99	-	.	Parent=FBgn0034786.1.mrna1;Target=FBgn0034786.1 1 945 +
Chr2	stalkie_big_nohaplotig	CDS	54364060	54364276	.	-	1	Parent=FBgn0034786.1.mrna1;Target=FBgn0034786.1 5364 5580 +
Chr2	stalkie_big_nohaplotig	CDS	54364343	54364504	.	-	1	Parent=FBgn0034786.1.mrna1;Target=FBgn0034786.1 5202 5363 +
Chr2	stalkie_big_nohaplotig	CDS	54364579	54365705	.	-	0	Parent=FBgn0034786.1.mrna1;Target=FBgn0034786.1 4075 5201 +
Chr2	stalkie_big_nohaplotig	CDS	54365762	54366084	.	-	2	Parent=FBgn0034786.1.mrna1;Target=FBgn0034786.1 3752 4074 +
Chr2	stalkie_big_nohaplotig	CDS	54367461	54368625	.	-	0	Parent=FBgn0034786.1.mrna1;Target=FBgn0034786.1 2587 3751 +
Chr2	stalkie_big_nohaplotig	CDS	54368692	54369171	.	-	0	Parent=FBgn0034786.1.mrna1;Target=FBgn0034786.1 2107 2586 +
Chr2	stalkie_big_nohaplotig	CDS	54369246	54370208	.	-	0	Parent=FBgn0034786.1.mrna1;Target=FBgn0034786.1 1144 2106 +
Chr2	stalkie_big_nohaplotig	CDS	54370263	54370460	.	-	0	Parent=FBgn0034786.1.mrna1;Target=FBgn0034786.1 946 1143 +
Chr2	stalkie_big_nohaplotig	CDS	54370515	54371459	.	-	0	Parent=FBgn0034786.1.mrna1;Target=FBgn0034786.1 1 945 +
Chr2	gffcl	locus	54512743	54513025	.	-	.	ID=RLOC_00017432;geneIDs=comp144477_c0_seq1.path1;transcripts=comp144477_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54512743	54513025	.	-	.	ID=comp144477_c0_seq1.mrna1;geneID=comp144477_c0_seq1.path1;Name=comp144477_c0_seq1;Dir=indeterminatecoverage=90.7;identity=99.6;matches=282;mismatches=1;indels=0;unknowns=0;Target=comp144477_c0_seq1 311 29 .;CDS_Target=comp144477_c0_seq1 88 29 .;locus=RLOC_00017432
Chr2	stalkie_big_nohaplotig	exon	54512743	54513025	99	-	.	Parent=comp144477_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	54512966	54513025	.	-	0	Parent=comp144477_c0_seq1.mrna1
Chr2	gffcl	locus	54641452	54642426	.	-	.	ID=RLOC_00017433;geneIDs=comp77484_c0_seq1.path1;transcripts=comp77484_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54641452	54642426	.	-	.	ID=comp77484_c0_seq1.mrna1;geneID=comp77484_c0_seq1.path1;Name=comp77484_c0_seq1;Dir=indeterminatecoverage=97.5;identity=99.6;matches=971;mismatches=4;indels=0;unknowns=0;Target=comp77484_c0_seq1 1000 26 .;CDS_Target=comp77484_c0_seq1 402 244 .;locus=RLOC_00017433
Chr2	stalkie_big_nohaplotig	exon	54641452	54642426	99	-	.	Parent=comp77484_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	54642050	54642208	.	-	0	Parent=comp77484_c0_seq1.mrna1
Chr2	gffcl	locus	54645527	54647947	.	+	.	ID=RLOC_00017434;geneIDs=FBgn0085408.1.path1;transcripts=FBgn0085408.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54645527	54647947	.	+	.	ID=FBgn0085408.1.mrna1;geneID=FBgn0085408.1.path1;Name=FBgn0085408.1;Dir=sensecoverage=40.5;identity=99.8;matches=2258;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017434
Chr2	stalkie_big_nohaplotig	exon	54645527	54647261	99	+	.	Parent=FBgn0085408.1.mrna1;Target=FBgn0085408.1 3327 5061 +
Chr2	stalkie_big_nohaplotig	exon	54647360	54647626	99	+	.	Parent=FBgn0085408.1.mrna1;Target=FBgn0085408.1 5062 5328 +
Chr2	stalkie_big_nohaplotig	exon	54647687	54647947	100	+	.	Parent=FBgn0085408.1.mrna1;Target=FBgn0085408.1 5329 5589 +
Chr2	stalkie_big_nohaplotig	CDS	54645528	54647261	.	+	0	Parent=FBgn0085408.1.mrna1;Target=FBgn0085408.1 3328 5061 +
Chr2	stalkie_big_nohaplotig	CDS	54647360	54647626	.	+	0	Parent=FBgn0085408.1.mrna1;Target=FBgn0085408.1 5062 5328 +
Chr2	stalkie_big_nohaplotig	CDS	54647687	54647947	.	+	0	Parent=FBgn0085408.1.mrna1;Target=FBgn0085408.1 5329 5589 +
Chr2	gffcl	locus	54653890	54657846	.	+	.	ID=RLOC_00017435;geneIDs=FBgn0033924.1.path1;transcripts=FBgn0033924.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54653890	54657846	.	+	.	ID=FBgn0033924.1.mrna1;geneID=FBgn0033924.1.path1;Name=FBgn0033924.1;Dir=sensecoverage=100.0;identity=99.6;matches=2495;mismatches=10;indels=0;unknowns=0;locus=RLOC_00017435
Chr2	stalkie_big_nohaplotig	exon	54653890	54653984	100	+	.	Parent=FBgn0033924.1.mrna1;Target=FBgn0033924.1 1 95 +
Chr2	stalkie_big_nohaplotig	exon	54654047	54654199	100	+	.	Parent=FBgn0033924.1.mrna1;Target=FBgn0033924.1 96 248 +
Chr2	stalkie_big_nohaplotig	exon	54654253	54654690	100	+	.	Parent=FBgn0033924.1.mrna1;Target=FBgn0033924.1 249 686 +
Chr2	stalkie_big_nohaplotig	exon	54654747	54655895	99	+	.	Parent=FBgn0033924.1.mrna1;Target=FBgn0033924.1 687 1835 +
Chr2	stalkie_big_nohaplotig	exon	54657119	54657327	99	+	.	Parent=FBgn0033924.1.mrna1;Target=FBgn0033924.1 1836 2044 +
Chr2	stalkie_big_nohaplotig	exon	54657386	54657846	99	+	.	Parent=FBgn0033924.1.mrna1;Target=FBgn0033924.1 2045 2505 +
Chr2	stalkie_big_nohaplotig	CDS	54653890	54653984	.	+	0	Parent=FBgn0033924.1.mrna1;Target=FBgn0033924.1 1 95 +
Chr2	stalkie_big_nohaplotig	CDS	54654047	54654199	.	+	1	Parent=FBgn0033924.1.mrna1;Target=FBgn0033924.1 96 248 +
Chr2	stalkie_big_nohaplotig	CDS	54654253	54654690	.	+	1	Parent=FBgn0033924.1.mrna1;Target=FBgn0033924.1 249 686 +
Chr2	stalkie_big_nohaplotig	CDS	54654747	54655895	.	+	1	Parent=FBgn0033924.1.mrna1;Target=FBgn0033924.1 687 1835 +
Chr2	stalkie_big_nohaplotig	CDS	54657119	54657327	.	+	1	Parent=FBgn0033924.1.mrna1;Target=FBgn0033924.1 1836 2044 +
Chr2	stalkie_big_nohaplotig	CDS	54657386	54657846	.	+	2	Parent=FBgn0033924.1.mrna1;Target=FBgn0033924.1 2045 2505 +
Chr2	gffcl	locus	54662933	54663851	.	-	.	ID=RLOC_00017436;geneIDs=ORF2440.path1;transcripts=ORF2440.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54662933	54663851	.	-	.	ID=ORF2440.mrna1;geneID=ORF2440.path1;Name=ORF2440;Dir=sensecoverage=100.0;identity=99.9;matches=857;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017436
Chr2	stalkie_big_nohaplotig	exon	54662933	54663664	100	-	.	Parent=ORF2440.mrna1;Target=ORF2440 127 858 +
Chr2	stalkie_big_nohaplotig	exon	54663726	54663851	99	-	.	Parent=ORF2440.mrna1;Target=ORF2440 1 126 +
Chr2	stalkie_big_nohaplotig	CDS	54662933	54663664	.	-	0	Parent=ORF2440.mrna1;Target=ORF2440 127 858 +
Chr2	stalkie_big_nohaplotig	CDS	54663726	54663851	.	-	0	Parent=ORF2440.mrna1;Target=ORF2440 1 126 +
Chr2	gffcl	locus	54665809	54709395	.	+	.	ID=RLOC_00017437;geneIDs=FBgn0010621.1.path1;transcripts=FBgn0010621.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54665809	54709395	.	+	.	ID=FBgn0010621.1.mrna1;geneID=FBgn0010621.1.path1;Name=FBgn0010621.1;Dir=sensecoverage=100.0;identity=99.7;matches=1621;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017437
Chr2	stalkie_big_nohaplotig	exon	54665809	54665919	100	+	.	Parent=FBgn0010621.1.mrna1;Target=FBgn0010621.1 1 111 +
Chr2	stalkie_big_nohaplotig	exon	54707751	54708732	99	+	.	Parent=FBgn0010621.1.mrna1;Target=FBgn0010621.1 112 1093 +
Chr2	stalkie_big_nohaplotig	exon	54708805	54708959	100	+	.	Parent=FBgn0010621.1.mrna1;Target=FBgn0010621.1 1094 1248 +
Chr2	stalkie_big_nohaplotig	exon	54709018	54709395	100	+	.	Parent=FBgn0010621.1.mrna1;Target=FBgn0010621.1 1249 1626 +
Chr2	stalkie_big_nohaplotig	CDS	54665809	54665919	.	+	0	Parent=FBgn0010621.1.mrna1;Target=FBgn0010621.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	54707751	54708732	.	+	0	Parent=FBgn0010621.1.mrna1;Target=FBgn0010621.1 112 1093 +
Chr2	stalkie_big_nohaplotig	CDS	54708805	54708959	.	+	2	Parent=FBgn0010621.1.mrna1;Target=FBgn0010621.1 1094 1248 +
Chr2	stalkie_big_nohaplotig	CDS	54709018	54709395	.	+	0	Parent=FBgn0010621.1.mrna1;Target=FBgn0010621.1 1249 1626 +
Chr2	gffcl	locus	54681010	54685744	.	+	.	ID=RLOC_00017438;geneIDs=comp146456_c0_seq1.path1;transcripts=comp146456_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54681010	54685744	.	+	.	ID=comp146456_c0_seq1.mrna1;geneID=comp146456_c0_seq1.path1;Name=comp146456_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=559;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017438
Chr2	stalkie_big_nohaplotig	exon	54681010	54681213	99	+	.	Parent=comp146456_c0_seq1.mrna1;Target=comp146456_c0_seq1 1 204 +
Chr2	stalkie_big_nohaplotig	exon	54684779	54684834	100	+	.	Parent=comp146456_c0_seq1.mrna1;Target=comp146456_c0_seq1 205 260 +
Chr2	stalkie_big_nohaplotig	exon	54685445	54685744	100	+	.	Parent=comp146456_c0_seq1.mrna1;Target=comp146456_c0_seq1 261 560 +
Chr2	stalkie_big_nohaplotig	CDS	54681193	54681213	.	+	0	Parent=comp146456_c0_seq1.mrna1;Target=comp146456_c0_seq1 184 204 +
Chr2	stalkie_big_nohaplotig	CDS	54684779	54684834	.	+	0	Parent=comp146456_c0_seq1.mrna1;Target=comp146456_c0_seq1 205 260 +
Chr2	stalkie_big_nohaplotig	CDS	54685445	54685703	.	+	1	Parent=comp146456_c0_seq1.mrna1;Target=comp146456_c0_seq1 261 519 +
Chr2	gffcl	locus	54690738	54692053	.	-	.	ID=RLOC_00017439;geneIDs=comp152510_c0_seq1.path2;transcripts=comp152510_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	54690738	54692053	.	-	.	ID=comp152510_c0_seq1.mrna2;geneID=comp152510_c0_seq1.path2;Name=comp152510_c0_seq1;Dir=sensecoverage=98.8;identity=95.9;matches=1224;mismatches=4;indels=48;unknowns=0;locus=RLOC_00017439
Chr2	stalkie_big_nohaplotig	exon	54690738	54691588	94	-	.	Parent=comp152510_c0_seq1.mrna2;Target=comp152510_c0_seq1 378 1276 +
Chr2	stalkie_big_nohaplotig	exon	54691677	54692053	100	-	.	Parent=comp152510_c0_seq1.mrna2;Target=comp152510_c0_seq1 1 377 +
Chr2	stalkie_big_nohaplotig	CDS	54691001	54691588	.	-	0	Parent=comp152510_c0_seq1.mrna2;Target=comp152510_c0_seq1 378 1013 +
Chr2	stalkie_big_nohaplotig	CDS	54691677	54691856	.	-	0	Parent=comp152510_c0_seq1.mrna2;Target=comp152510_c0_seq1 198 377 +
Chr2	gffcl	locus	54711366	54712427	.	-	.	ID=RLOC_00017440;geneIDs=FBgn0033690.1.path1;transcripts=FBgn0033690.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54711366	54712427	.	-	.	ID=FBgn0033690.1.mrna1;geneID=FBgn0033690.1.path1;Name=FBgn0033690.1;Dir=sensecoverage=100.0;identity=99.1;matches=999;mismatches=8;indels=1;unknowns=0;locus=RLOC_00017440
Chr2	stalkie_big_nohaplotig	exon	54711366	54712195	98	-	.	Parent=FBgn0033690.1.mrna1;Target=FBgn0033690.1 178 1008 +
Chr2	stalkie_big_nohaplotig	exon	54712251	54712427	100	-	.	Parent=FBgn0033690.1.mrna1;Target=FBgn0033690.1 1 177 +
Chr2	stalkie_big_nohaplotig	CDS	54711366	54712195	.	-	0	Parent=FBgn0033690.1.mrna1;Target=FBgn0033690.1 178 1008 +
Chr2	stalkie_big_nohaplotig	CDS	54712251	54712427	.	-	0	Parent=FBgn0033690.1.mrna1;Target=FBgn0033690.1 1 177 +
Chr2	gffcl	locus	54713718	54750820	.	-	.	ID=RLOC_00017441;geneIDs=FBgn0259226.1.path1;transcripts=FBgn0259226.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54713718	54750820	.	-	.	ID=FBgn0259226.1.mrna1;geneID=FBgn0259226.1.path1;Name=FBgn0259226.1;Dir=sensecoverage=100.0;identity=99.8;matches=4137;mismatches=9;indels=0;unknowns=0;locus=RLOC_00017441
Chr2	stalkie_big_nohaplotig	exon	54713718	54714006	100	-	.	Parent=FBgn0259226.1.mrna1;Target=FBgn0259226.1 3858 4146 +
Chr2	stalkie_big_nohaplotig	exon	54714069	54714252	100	-	.	Parent=FBgn0259226.1.mrna1;Target=FBgn0259226.1 3674 3857 +
Chr2	stalkie_big_nohaplotig	exon	54714620	54714825	100	-	.	Parent=FBgn0259226.1.mrna1;Target=FBgn0259226.1 3468 3673 +
Chr2	stalkie_big_nohaplotig	exon	54714888	54715038	99	-	.	Parent=FBgn0259226.1.mrna1;Target=FBgn0259226.1 3317 3467 +
Chr2	stalkie_big_nohaplotig	exon	54715111	54715428	99	-	.	Parent=FBgn0259226.1.mrna1;Target=FBgn0259226.1 2999 3316 +
Chr2	stalkie_big_nohaplotig	exon	54715519	54715845	100	-	.	Parent=FBgn0259226.1.mrna1;Target=FBgn0259226.1 2672 2998 +
Chr2	stalkie_big_nohaplotig	exon	54715907	54717154	100	-	.	Parent=FBgn0259226.1.mrna1;Target=FBgn0259226.1 1424 2671 +
Chr2	stalkie_big_nohaplotig	exon	54742070	54742129	100	-	.	Parent=FBgn0259226.1.mrna1;Target=FBgn0259226.1 1364 1423 +
Chr2	stalkie_big_nohaplotig	exon	54742187	54743292	99	-	.	Parent=FBgn0259226.1.mrna1;Target=FBgn0259226.1 258 1363 +
Chr2	stalkie_big_nohaplotig	exon	54743403	54743538	100	-	.	Parent=FBgn0259226.1.mrna1;Target=FBgn0259226.1 122 257 +
Chr2	stalkie_big_nohaplotig	exon	54750700	54750820	98	-	.	Parent=FBgn0259226.1.mrna1;Target=FBgn0259226.1 1 121 +
Chr2	stalkie_big_nohaplotig	CDS	54713718	54714006	.	-	1	Parent=FBgn0259226.1.mrna1;Target=FBgn0259226.1 3858 4146 +
Chr2	stalkie_big_nohaplotig	CDS	54714069	54714252	.	-	2	Parent=FBgn0259226.1.mrna1;Target=FBgn0259226.1 3674 3857 +
Chr2	stalkie_big_nohaplotig	CDS	54714620	54714825	.	-	1	Parent=FBgn0259226.1.mrna1;Target=FBgn0259226.1 3468 3673 +
Chr2	stalkie_big_nohaplotig	CDS	54714888	54715038	.	-	2	Parent=FBgn0259226.1.mrna1;Target=FBgn0259226.1 3317 3467 +
Chr2	stalkie_big_nohaplotig	CDS	54715111	54715428	.	-	2	Parent=FBgn0259226.1.mrna1;Target=FBgn0259226.1 2999 3316 +
Chr2	stalkie_big_nohaplotig	CDS	54715519	54715845	.	-	2	Parent=FBgn0259226.1.mrna1;Target=FBgn0259226.1 2672 2998 +
Chr2	stalkie_big_nohaplotig	CDS	54715907	54717154	.	-	2	Parent=FBgn0259226.1.mrna1;Target=FBgn0259226.1 1424 2671 +
Chr2	stalkie_big_nohaplotig	CDS	54742070	54742129	.	-	2	Parent=FBgn0259226.1.mrna1;Target=FBgn0259226.1 1364 1423 +
Chr2	stalkie_big_nohaplotig	CDS	54742187	54743292	.	-	1	Parent=FBgn0259226.1.mrna1;Target=FBgn0259226.1 258 1363 +
Chr2	stalkie_big_nohaplotig	CDS	54743403	54743538	.	-	2	Parent=FBgn0259226.1.mrna1;Target=FBgn0259226.1 122 257 +
Chr2	stalkie_big_nohaplotig	CDS	54750700	54750820	.	-	0	Parent=FBgn0259226.1.mrna1;Target=FBgn0259226.1 1 121 +
Chr2	gffcl	locus	54785850	54790270	.	+	.	ID=RLOC_00017442;geneIDs=comp146456_c0_seq1.path2;transcripts=comp146456_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	54785850	54790270	.	+	.	ID=comp146456_c0_seq1.mrna2;geneID=comp146456_c0_seq1.path2;Name=comp146456_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=556;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017442
Chr2	stalkie_big_nohaplotig	exon	54785850	54786053	99	+	.	Parent=comp146456_c0_seq1.mrna2;Target=comp146456_c0_seq1 1 204 +
Chr2	stalkie_big_nohaplotig	exon	54789303	54789358	100	+	.	Parent=comp146456_c0_seq1.mrna2;Target=comp146456_c0_seq1 205 260 +
Chr2	stalkie_big_nohaplotig	exon	54789971	54790270	99	+	.	Parent=comp146456_c0_seq1.mrna2;Target=comp146456_c0_seq1 261 560 +
Chr2	stalkie_big_nohaplotig	CDS	54786033	54786053	.	+	0	Parent=comp146456_c0_seq1.mrna2;Target=comp146456_c0_seq1 184 204 +
Chr2	stalkie_big_nohaplotig	CDS	54789303	54789358	.	+	0	Parent=comp146456_c0_seq1.mrna2;Target=comp146456_c0_seq1 205 260 +
Chr2	stalkie_big_nohaplotig	CDS	54789971	54790229	.	+	1	Parent=comp146456_c0_seq1.mrna2;Target=comp146456_c0_seq1 261 519 +
Chr2	gffcl	locus	54795287	54796601	.	-	.	ID=RLOC_00017443;geneIDs=comp152510_c0_seq1.path1;transcripts=comp152510_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54795287	54796601	.	-	.	ID=comp152510_c0_seq1.mrna1;geneID=comp152510_c0_seq1.path1;Name=comp152510_c0_seq1;Dir=sensecoverage=98.8;identity=96.0;matches=1225;mismatches=2;indels=49;unknowns=0;locus=RLOC_00017443
Chr2	stalkie_big_nohaplotig	exon	54795287	54796136	94	-	.	Parent=comp152510_c0_seq1.mrna1;Target=comp152510_c0_seq1 378 1276 +
Chr2	stalkie_big_nohaplotig	exon	54796225	54796601	100	-	.	Parent=comp152510_c0_seq1.mrna1;Target=comp152510_c0_seq1 1 377 +
Chr2	stalkie_big_nohaplotig	CDS	54795549	54796136	.	-	0	Parent=comp152510_c0_seq1.mrna1;Target=comp152510_c0_seq1 378 1013 +
Chr2	stalkie_big_nohaplotig	CDS	54796225	54796404	.	-	0	Parent=comp152510_c0_seq1.mrna1;Target=comp152510_c0_seq1 198 377 +
Chr2	gffcl	locus	54809256	55381957	.	.	.	ID=RLOC_00017444;geneIDs=comp150401_c0_seq1.path1,comp159358_c0_seq1.path1,comp159358_c0_seq1.path2;transcripts=comp159358_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54809256	55380708	.	-	.	ID=comp159358_c0_seq1.mrna1;geneID=comp159358_c0_seq1.path1;Name=comp159358_c0_seq1;Dir=indeterminatecoverage=88.3;identity=94.6;matches=506;mismatches=26;indels=3;unknowns=0;Target=comp159358_c0_seq1 331 155 .;locus=RLOC_00017444
Chr2	stalkie_big_nohaplotig	exon	54809256	54809343	68	-	.	Parent=comp159358_c0_seq1.mrna1;Target=comp159358_c0_seq1 682 594 .
Chr2	stalkie_big_nohaplotig	exon	54834745	54834747	100	-	.	Parent=comp159358_c0_seq1.mrna1;Target=comp159358_c0_seq1 593 591 .
Chr2	stalkie_big_nohaplotig	exon	54859223	54859229	100	-	.	Parent=comp159358_c0_seq1.mrna1;Target=comp159358_c0_seq1 590 584 .
Chr2	stalkie_big_nohaplotig	exon	54867347	54867349	100	-	.	Parent=comp159358_c0_seq1.mrna1;Target=comp159358_c0_seq1 583 581 .
Chr2	stalkie_big_nohaplotig	exon	54871263	54871268	83	-	.	Parent=comp159358_c0_seq1.mrna1;Target=comp159358_c0_seq1 580 575 .
Chr2	stalkie_big_nohaplotig	exon	54876212	54876220	100	-	.	Parent=comp159358_c0_seq1.mrna1;Target=comp159358_c0_seq1 574 566 .
Chr2	stalkie_big_nohaplotig	exon	54881804	54881809	100	-	.	Parent=comp159358_c0_seq1.mrna1;Target=comp159358_c0_seq1 565 560 .
Chr2	stalkie_big_nohaplotig	exon	55380299	55380708	100	-	.	Parent=comp159358_c0_seq1.mrna1;Target=comp159358_c0_seq1 412 3 .
Chr2	stalkie_big_nohaplotig	CDS	55380380	55380556	.	-	0	Parent=comp159358_c0_seq1.mrna1
Chr2	gffcl	locus	54815350	54815649	.	+	.	ID=RLOC_00017445;geneIDs=comp137192_c0_seq1.path1;transcripts=comp137192_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54815350	54815649	.	+	.	ID=comp137192_c0_seq1.mrna1;geneID=comp137192_c0_seq1.path1;Name=comp137192_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=297;mismatches=3;indels=0;unknowns=0;Target=comp137192_c0_seq1 300 1 .;CDS_Target=comp137192_c0_seq1 89 3 .;locus=RLOC_00017445
Chr2	stalkie_big_nohaplotig	exon	54815350	54815649	99	+	.	Parent=comp137192_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	54815352	54815438	.	+	0	Parent=comp137192_c0_seq1.mrna1
Chr2	gffcl	locus	54816245	54817870	.	-	.	ID=RLOC_00017446;geneIDs=FBgn0033309.1.path1;transcripts=FBgn0033309.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54816245	54817870	.	-	.	ID=FBgn0033309.1.mrna1;geneID=FBgn0033309.1.path1;Name=FBgn0033309.1;Dir=sensecoverage=100.0;identity=99.8;matches=1200;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017446
Chr2	stalkie_big_nohaplotig	exon	54816245	54816417	100	-	.	Parent=FBgn0033309.1.mrna1;Target=FBgn0033309.1 1031 1203 +
Chr2	stalkie_big_nohaplotig	exon	54816482	54816652	99	-	.	Parent=FBgn0033309.1.mrna1;Target=FBgn0033309.1 860 1030 +
Chr2	stalkie_big_nohaplotig	exon	54816731	54817081	99	-	.	Parent=FBgn0033309.1.mrna1;Target=FBgn0033309.1 509 859 +
Chr2	stalkie_big_nohaplotig	exon	54817148	54817208	100	-	.	Parent=FBgn0033309.1.mrna1;Target=FBgn0033309.1 448 508 +
Chr2	stalkie_big_nohaplotig	exon	54817268	54817400	100	-	.	Parent=FBgn0033309.1.mrna1;Target=FBgn0033309.1 315 447 +
Chr2	stalkie_big_nohaplotig	exon	54817473	54817702	100	-	.	Parent=FBgn0033309.1.mrna1;Target=FBgn0033309.1 85 314 +
Chr2	stalkie_big_nohaplotig	exon	54817787	54817870	98	-	.	Parent=FBgn0033309.1.mrna1;Target=FBgn0033309.1 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	54816245	54816417	.	-	2	Parent=FBgn0033309.1.mrna1;Target=FBgn0033309.1 1031 1203 +
Chr2	stalkie_big_nohaplotig	CDS	54816482	54816652	.	-	2	Parent=FBgn0033309.1.mrna1;Target=FBgn0033309.1 860 1030 +
Chr2	stalkie_big_nohaplotig	CDS	54816731	54817081	.	-	2	Parent=FBgn0033309.1.mrna1;Target=FBgn0033309.1 509 859 +
Chr2	stalkie_big_nohaplotig	CDS	54817148	54817208	.	-	0	Parent=FBgn0033309.1.mrna1;Target=FBgn0033309.1 448 508 +
Chr2	stalkie_big_nohaplotig	CDS	54817268	54817400	.	-	1	Parent=FBgn0033309.1.mrna1;Target=FBgn0033309.1 315 447 +
Chr2	stalkie_big_nohaplotig	CDS	54817473	54817702	.	-	0	Parent=FBgn0033309.1.mrna1;Target=FBgn0033309.1 85 314 +
Chr2	stalkie_big_nohaplotig	CDS	54817787	54817870	.	-	0	Parent=FBgn0033309.1.mrna1;Target=FBgn0033309.1 1 84 +
Chr2	gffcl	locus	54821283	54822772	.	+	.	ID=RLOC_00017447;geneIDs=FBgn0035189.1.path1;transcripts=FBgn0035189.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54821283	54822772	.	+	.	ID=FBgn0035189.1.mrna1;geneID=FBgn0035189.1.path1;Name=FBgn0035189.1;Dir=sensecoverage=100.0;identity=99.7;matches=1116;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017447
Chr2	stalkie_big_nohaplotig	exon	54821283	54821517	99	+	.	Parent=FBgn0035189.1.mrna1;Target=FBgn0035189.1 1 235 +
Chr2	stalkie_big_nohaplotig	exon	54821764	54821862	100	+	.	Parent=FBgn0035189.1.mrna1;Target=FBgn0035189.1 236 334 +
Chr2	stalkie_big_nohaplotig	exon	54821926	54822539	99	+	.	Parent=FBgn0035189.1.mrna1;Target=FBgn0035189.1 335 948 +
Chr2	stalkie_big_nohaplotig	exon	54822602	54822772	100	+	.	Parent=FBgn0035189.1.mrna1;Target=FBgn0035189.1 949 1119 +
Chr2	stalkie_big_nohaplotig	CDS	54821283	54821517	.	+	0	Parent=FBgn0035189.1.mrna1;Target=FBgn0035189.1 1 235 +
Chr2	stalkie_big_nohaplotig	CDS	54821764	54821862	.	+	2	Parent=FBgn0035189.1.mrna1;Target=FBgn0035189.1 236 334 +
Chr2	stalkie_big_nohaplotig	CDS	54821926	54822539	.	+	2	Parent=FBgn0035189.1.mrna1;Target=FBgn0035189.1 335 948 +
Chr2	stalkie_big_nohaplotig	CDS	54822602	54822772	.	+	0	Parent=FBgn0035189.1.mrna1;Target=FBgn0035189.1 949 1119 +
Chr2	gffcl	locus	54822809	54823165	.	+	.	ID=RLOC_00017448;geneIDs=comp144573_c0_seq1.path1;transcripts=comp144573_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54822809	54823165	.	+	.	ID=comp144573_c0_seq1.mrna1;geneID=comp144573_c0_seq1.path1;Name=comp144573_c0_seq1;Dir=indeterminatecoverage=96.5;identity=85.4;matches=350;mismatches=7;indels=53;unknowns=0;Target=comp144573_c0_seq1 410 1 .;CDS_Target=comp144573_c0_seq1 361 323 .;locus=RLOC_00017448
Chr2	stalkie_big_nohaplotig	exon	54822809	54823165	85	+	.	Parent=comp144573_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	54823083	54823120	.	+	0	Parent=comp144573_c0_seq1.mrna1
Chr2	gffcl	locus	54824926	54830030	.	+	.	ID=RLOC_00017449;geneIDs=comp160835_c1_seq1.path1;transcripts=comp160835_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54824926	54830030	.	+	.	ID=comp160835_c1_seq1.mrna1;geneID=comp160835_c1_seq1.path1;Name=comp160835_c1_seq1;Dir=sensecoverage=92.9;identity=94.4;matches=578;mismatches=24;indels=10;unknowns=0;Target=comp160835_c1_seq1 23 214 +;locus=RLOC_00017449
Chr2	stalkie_big_nohaplotig	exon	54824926	54825338	99	+	.	Parent=comp160835_c1_seq1.mrna1;Target=comp160835_c1_seq1 23 435 +
Chr2	stalkie_big_nohaplotig	exon	54825406	54825527	87	+	.	Parent=comp160835_c1_seq1.mrna1;Target=comp160835_c1_seq1 436 557 +
Chr2	stalkie_big_nohaplotig	exon	54829936	54829944	100	+	.	Parent=comp160835_c1_seq1.mrna1;Target=comp160835_c1_seq1 558 566 +
Chr2	stalkie_big_nohaplotig	exon	54829967	54830030	78	+	.	Parent=comp160835_c1_seq1.mrna1;Target=comp160835_c1_seq1 604 665 +
Chr2	stalkie_big_nohaplotig	CDS	54824926	54825117	.	+	0	Parent=comp160835_c1_seq1.mrna1
Chr2	gffcl	locus	54844997	54849007	.	+	.	ID=RLOC_00017450;geneIDs=FBgn0030114.1.path1;transcripts=FBgn0030114.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54844997	54849007	.	+	.	ID=FBgn0030114.1.mrna1;geneID=FBgn0030114.1.path1;Name=FBgn0030114.1;Dir=sensecoverage=100.0;identity=99.2;matches=1761;mismatches=15;indels=0;unknowns=0;locus=RLOC_00017450
Chr2	stalkie_big_nohaplotig	exon	54844997	54845178	100	+	.	Parent=FBgn0030114.1.mrna1;Target=FBgn0030114.1 1 182 +
Chr2	stalkie_big_nohaplotig	exon	54845250	54845613	99	+	.	Parent=FBgn0030114.1.mrna1;Target=FBgn0030114.1 183 546 +
Chr2	stalkie_big_nohaplotig	exon	54845671	54846033	98	+	.	Parent=FBgn0030114.1.mrna1;Target=FBgn0030114.1 547 909 +
Chr2	stalkie_big_nohaplotig	exon	54846102	54846424	98	+	.	Parent=FBgn0030114.1.mrna1;Target=FBgn0030114.1 910 1232 +
Chr2	stalkie_big_nohaplotig	exon	54847818	54848028	99	+	.	Parent=FBgn0030114.1.mrna1;Target=FBgn0030114.1 1233 1443 +
Chr2	stalkie_big_nohaplotig	exon	54848097	54848195	100	+	.	Parent=FBgn0030114.1.mrna1;Target=FBgn0030114.1 1444 1542 +
Chr2	stalkie_big_nohaplotig	exon	54848774	54849007	100	+	.	Parent=FBgn0030114.1.mrna1;Target=FBgn0030114.1 1543 1776 +
Chr2	stalkie_big_nohaplotig	CDS	54844997	54845178	.	+	0	Parent=FBgn0030114.1.mrna1;Target=FBgn0030114.1 1 182 +
Chr2	stalkie_big_nohaplotig	CDS	54845250	54845613	.	+	1	Parent=FBgn0030114.1.mrna1;Target=FBgn0030114.1 183 546 +
Chr2	stalkie_big_nohaplotig	CDS	54845671	54846033	.	+	0	Parent=FBgn0030114.1.mrna1;Target=FBgn0030114.1 547 909 +
Chr2	stalkie_big_nohaplotig	CDS	54846102	54846424	.	+	0	Parent=FBgn0030114.1.mrna1;Target=FBgn0030114.1 910 1232 +
Chr2	stalkie_big_nohaplotig	CDS	54847818	54848028	.	+	1	Parent=FBgn0030114.1.mrna1;Target=FBgn0030114.1 1233 1443 +
Chr2	stalkie_big_nohaplotig	CDS	54848097	54848195	.	+	0	Parent=FBgn0030114.1.mrna1;Target=FBgn0030114.1 1444 1542 +
Chr2	stalkie_big_nohaplotig	CDS	54848774	54849007	.	+	0	Parent=FBgn0030114.1.mrna1;Target=FBgn0030114.1 1543 1776 +
Chr2	gffcl	locus	54862611	54863881	.	+	.	ID=RLOC_00017451;geneIDs=comp157870_c0_seq1.path1;transcripts=comp157870_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54862611	54863881	.	+	.	ID=comp157870_c0_seq1.mrna1;geneID=comp157870_c0_seq1.path1;Name=comp157870_c0_seq1;Dir=sensecoverage=99.9;identity=97.4;matches=1195;mismatches=21;indels=11;unknowns=0;Target=comp157870_c0_seq1 881 925 +;locus=RLOC_00017451
Chr2	stalkie_big_nohaplotig	exon	54862611	54863126	99	+	.	Parent=comp157870_c0_seq1.mrna1;Target=comp157870_c0_seq1 2 517 +
Chr2	stalkie_big_nohaplotig	exon	54863182	54863881	95	+	.	Parent=comp157870_c0_seq1.mrna1;Target=comp157870_c0_seq1 518 1228 +
Chr2	stalkie_big_nohaplotig	CDS	54863544	54863588	.	+	0	Parent=comp157870_c0_seq1.mrna1
Chr2	gffcl	locus	54868833	54890980	.	.	.	ID=RLOC_00017452;geneIDs=FBgn0000606.1.path1,comp156643_c6_seq1.path1,comp158484_c1_seq1.path1;transcripts=comp158484_c1_seq1.mrna1,FBgn0000606.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54868833	54890500	.	-	.	ID=comp158484_c1_seq1.mrna1;geneID=comp158484_c1_seq1.path1;Name=comp158484_c1_seq1;Dir=antisensecoverage=91.4;identity=99.4;matches=2166;mismatches=11;indels=1;unknowns=0;locus=RLOC_00017452
Chr2	stalkie_big_nohaplotig	exon	54868833	54870195	100	-	.	Parent=comp158484_c1_seq1.mrna1;Target=comp158484_c1_seq1 206 1568 -
Chr2	stalkie_big_nohaplotig	exon	54870687	54870818	100	-	.	Parent=comp158484_c1_seq1.mrna1;Target=comp158484_c1_seq1 1569 1700 -
Chr2	stalkie_big_nohaplotig	exon	54873367	54873665	100	-	.	Parent=comp158484_c1_seq1.mrna1;Target=comp158484_c1_seq1 1701 1999 -
Chr2	stalkie_big_nohaplotig	exon	54889817	54889868	100	-	.	Parent=comp158484_c1_seq1.mrna1;Target=comp158484_c1_seq1 2000 2051 -
Chr2	stalkie_big_nohaplotig	exon	54890169	54890500	96	-	.	Parent=comp158484_c1_seq1.mrna1;Target=comp158484_c1_seq1 2052 2382 -
Chr2	stalkie_big_nohaplotig	CDS	54869198	54870195	.	-	2	Parent=comp158484_c1_seq1.mrna1;Target=comp158484_c1_seq1 571 1568 .
Chr2	stalkie_big_nohaplotig	CDS	54870687	54870801	.	-	0	Parent=comp158484_c1_seq1.mrna1;Target=comp158484_c1_seq1 1569 1683 .
Chr2	stalkie_big_nohaplotig	mRNA	54869201	54889850	.	-	.	ID=FBgn0000606.1.mrna1;geneID=FBgn0000606.1.path1;Name=FBgn0000606.1;Dir=sensecoverage=100.0;identity=100.0;matches=1161;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017452
Chr2	stalkie_big_nohaplotig	exon	54869201	54870195	100	-	.	Parent=FBgn0000606.1.mrna1;Target=FBgn0000606.1 167 1161 +
Chr2	stalkie_big_nohaplotig	exon	54870687	54870818	100	-	.	Parent=FBgn0000606.1.mrna1;Target=FBgn0000606.1 35 166 +
Chr2	stalkie_big_nohaplotig	exon	54889817	54889850	100	-	.	Parent=FBgn0000606.1.mrna1;Target=FBgn0000606.1 1 34 +
Chr2	stalkie_big_nohaplotig	CDS	54869201	54870195	.	-	2	Parent=FBgn0000606.1.mrna1;Target=FBgn0000606.1 167 1161 +
Chr2	stalkie_big_nohaplotig	CDS	54870687	54870818	.	-	2	Parent=FBgn0000606.1.mrna1;Target=FBgn0000606.1 35 166 +
Chr2	stalkie_big_nohaplotig	CDS	54889817	54889850	.	-	0	Parent=FBgn0000606.1.mrna1;Target=FBgn0000606.1 1 34 +
Chr2	gffcl	locus	54892734	54894634	.	+	.	ID=RLOC_00017453;geneIDs=FBgn0034061.1.path1;transcripts=FBgn0034061.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54892734	54894634	.	+	.	ID=FBgn0034061.1.mrna1;geneID=FBgn0034061.1.path1;Name=FBgn0034061.1;Dir=sensecoverage=100.0;identity=99.8;matches=596;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017453
Chr2	stalkie_big_nohaplotig	exon	54892734	54892961	100	+	.	Parent=FBgn0034061.1.mrna1;Target=FBgn0034061.1 1 228 +
Chr2	stalkie_big_nohaplotig	exon	54893030	54893161	100	+	.	Parent=FBgn0034061.1.mrna1;Target=FBgn0034061.1 229 360 +
Chr2	stalkie_big_nohaplotig	exon	54893230	54893397	100	+	.	Parent=FBgn0034061.1.mrna1;Target=FBgn0034061.1 361 528 +
Chr2	stalkie_big_nohaplotig	exon	54894566	54894634	98	+	.	Parent=FBgn0034061.1.mrna1;Target=FBgn0034061.1 529 597 +
Chr2	stalkie_big_nohaplotig	CDS	54892734	54892961	.	+	0	Parent=FBgn0034061.1.mrna1;Target=FBgn0034061.1 1 228 +
Chr2	stalkie_big_nohaplotig	CDS	54893030	54893161	.	+	0	Parent=FBgn0034061.1.mrna1;Target=FBgn0034061.1 229 360 +
Chr2	stalkie_big_nohaplotig	CDS	54893230	54893397	.	+	0	Parent=FBgn0034061.1.mrna1;Target=FBgn0034061.1 361 528 +
Chr2	stalkie_big_nohaplotig	CDS	54894566	54894634	.	+	0	Parent=FBgn0034061.1.mrna1;Target=FBgn0034061.1 529 597 +
Chr2	gffcl	locus	54896055	54900774	.	-	.	ID=RLOC_00017454;geneIDs=FBgn0034060.1.path1;transcripts=FBgn0034060.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54896055	54900774	.	-	.	ID=FBgn0034060.1.mrna1;geneID=FBgn0034060.1.path1;Name=FBgn0034060.1;Dir=sensecoverage=100.0;identity=99.6;matches=4592;mismatches=15;indels=4;unknowns=0;locus=RLOC_00017454
Chr2	stalkie_big_nohaplotig	exon	54896055	54898750	99	-	.	Parent=FBgn0034060.1.mrna1;Target=FBgn0034060.1 1915 4608 +
Chr2	stalkie_big_nohaplotig	exon	54898812	54900140	99	-	.	Parent=FBgn0034060.1.mrna1;Target=FBgn0034060.1 586 1914 +
Chr2	stalkie_big_nohaplotig	exon	54900190	54900774	100	-	.	Parent=FBgn0034060.1.mrna1;Target=FBgn0034060.1 1 585 +
Chr2	stalkie_big_nohaplotig	CDS	54896055	54898750	.	-	0	Parent=FBgn0034060.1.mrna1;Target=FBgn0034060.1 1915 4608 +
Chr2	stalkie_big_nohaplotig	CDS	54898812	54900140	.	-	0	Parent=FBgn0034060.1.mrna1;Target=FBgn0034060.1 586 1914 +
Chr2	stalkie_big_nohaplotig	CDS	54900190	54900774	.	-	0	Parent=FBgn0034060.1.mrna1;Target=FBgn0034060.1 1 585 +
Chr2	gffcl	locus	54902411	54902736	.	+	.	ID=RLOC_00017455;geneIDs=comp149766_c0_seq1.path1;transcripts=comp149766_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54902411	54902736	.	+	.	ID=comp149766_c0_seq1.mrna1;geneID=comp149766_c0_seq1.path1;Name=comp149766_c0_seq1;Dir=indeterminatecoverage=96.6;identity=91.1;matches=306;mismatches=20;indels=10;unknowns=0;Target=comp149766_c0_seq1 348 13 .;CDS_Target=comp149766_c0_seq1 187 14 .;locus=RLOC_00017455
Chr2	stalkie_big_nohaplotig	exon	54902411	54902736	91	+	.	Parent=comp149766_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	54902412	54902579	.	+	0	Parent=comp149766_c0_seq1.mrna1
Chr2	gffcl	locus	54903275	54904268	.	-	.	ID=RLOC_00017456;geneIDs=FBgn0030518.1.path1;transcripts=FBgn0030518.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54903275	54904268	.	-	.	ID=FBgn0030518.1.mrna1;geneID=FBgn0030518.1.path1;Name=FBgn0030518.1;Dir=sensecoverage=100.0;identity=99.3;matches=712;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017456
Chr2	stalkie_big_nohaplotig	exon	54903275	54903356	100	-	.	Parent=FBgn0030518.1.mrna1;Target=FBgn0030518.1 636 717 +
Chr2	stalkie_big_nohaplotig	exon	54903415	54903617	99	-	.	Parent=FBgn0030518.1.mrna1;Target=FBgn0030518.1 433 635 +
Chr2	stalkie_big_nohaplotig	exon	54903670	54903823	100	-	.	Parent=FBgn0030518.1.mrna1;Target=FBgn0030518.1 279 432 +
Chr2	stalkie_big_nohaplotig	exon	54903879	54903992	99	-	.	Parent=FBgn0030518.1.mrna1;Target=FBgn0030518.1 165 278 +
Chr2	stalkie_big_nohaplotig	exon	54904052	54904146	98	-	.	Parent=FBgn0030518.1.mrna1;Target=FBgn0030518.1 70 164 +
Chr2	stalkie_big_nohaplotig	exon	54904200	54904268	97	-	.	Parent=FBgn0030518.1.mrna1;Target=FBgn0030518.1 1 69 +
Chr2	stalkie_big_nohaplotig	CDS	54903275	54903356	.	-	1	Parent=FBgn0030518.1.mrna1;Target=FBgn0030518.1 636 717 +
Chr2	stalkie_big_nohaplotig	CDS	54903415	54903617	.	-	0	Parent=FBgn0030518.1.mrna1;Target=FBgn0030518.1 433 635 +
Chr2	stalkie_big_nohaplotig	CDS	54903670	54903823	.	-	1	Parent=FBgn0030518.1.mrna1;Target=FBgn0030518.1 279 432 +
Chr2	stalkie_big_nohaplotig	CDS	54903879	54903992	.	-	1	Parent=FBgn0030518.1.mrna1;Target=FBgn0030518.1 165 278 +
Chr2	stalkie_big_nohaplotig	CDS	54904052	54904146	.	-	0	Parent=FBgn0030518.1.mrna1;Target=FBgn0030518.1 70 164 +
Chr2	stalkie_big_nohaplotig	CDS	54904200	54904268	.	-	0	Parent=FBgn0030518.1.mrna1;Target=FBgn0030518.1 1 69 +
Chr2	stalkie_big_nohaplotig	mRNA	54910214	54912008	.	+	.	ID=comp135837_c0_seq1.mrna1;geneID=comp135837_c0_seq1.path1;Name=comp135837_c0_seq1;Dir=antisensecoverage=95.7;identity=99.7;matches=711;mismatches=2;indels=0;unknowns=0;Target=comp135837_c0_seq1 606 713 .;locus=RLOC_00017457
Chr2	stalkie_big_nohaplotig	exon	54910214	54910902	99	+	.	Parent=comp135837_c0_seq1.mrna1;Target=comp135837_c0_seq1 25 713 -
Chr2	stalkie_big_nohaplotig	exon	54911985	54912008	100	+	.	Parent=comp135837_c0_seq1.mrna1;Target=comp135837_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	CDS	54910214	54910321	.	+	0	Parent=comp135837_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54927340	54927892	.	+	.	ID=comp148833_c0_seq1.mrna1;geneID=comp148833_c0_seq1.path1;Name=comp148833_c0_seq1;Dir=indeterminatecoverage=84.3;identity=91.6;matches=513;mismatches=37;indels=10;unknowns=0;Target=comp148833_c0_seq1 661 105 .;CDS_Target=comp148833_c0_seq1 583 536 .;locus=RLOC_00017457
Chr2	stalkie_big_nohaplotig	exon	54927340	54927892	91	+	.	Parent=comp148833_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	54927767	54927814	.	+	0	Parent=comp148833_c0_seq1.mrna1
Chr2	gffcl	locus	54930691	54930836	.	+	.	ID=RLOC_00017458;geneIDs=comp49304_c0_seq1.path2;transcripts=comp49304_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	54930691	54930836	.	+	.	ID=comp49304_c0_seq1.mrna2;geneID=comp49304_c0_seq1.path2;Name=comp49304_c0_seq1;Dir=indeterminatecoverage=26.0;identity=99.3;matches=145;mismatches=1;indels=0;unknowns=0;Target=comp49304_c0_seq1 561 416 .;locus=RLOC_00017458
Chr2	stalkie_big_nohaplotig	exon	54930691	54930836	99	+	.	Parent=comp49304_c0_seq1.mrna2
Chr2	gffcl	locus	54931912	54932701	.	-	.	ID=RLOC_00017459;geneIDs=FBgn0034059.1.path1;transcripts=FBgn0034059.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54931912	54932701	.	-	.	ID=FBgn0034059.1.mrna1;geneID=FBgn0034059.1.path1;Name=FBgn0034059.1;Dir=sensecoverage=100.0;identity=99.5;matches=585;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017459
Chr2	stalkie_big_nohaplotig	exon	54931912	54932134	98	-	.	Parent=FBgn0034059.1.mrna1;Target=FBgn0034059.1 366 588 +
Chr2	stalkie_big_nohaplotig	exon	54932206	54932342	100	-	.	Parent=FBgn0034059.1.mrna1;Target=FBgn0034059.1 229 365 +
Chr2	stalkie_big_nohaplotig	exon	54932410	54932565	100	-	.	Parent=FBgn0034059.1.mrna1;Target=FBgn0034059.1 73 228 +
Chr2	stalkie_big_nohaplotig	exon	54932630	54932701	100	-	.	Parent=FBgn0034059.1.mrna1;Target=FBgn0034059.1 1 72 +
Chr2	stalkie_big_nohaplotig	CDS	54931912	54932134	.	-	1	Parent=FBgn0034059.1.mrna1;Target=FBgn0034059.1 366 588 +
Chr2	stalkie_big_nohaplotig	CDS	54932206	54932342	.	-	0	Parent=FBgn0034059.1.mrna1;Target=FBgn0034059.1 229 365 +
Chr2	stalkie_big_nohaplotig	CDS	54932410	54932565	.	-	0	Parent=FBgn0034059.1.mrna1;Target=FBgn0034059.1 73 228 +
Chr2	stalkie_big_nohaplotig	CDS	54932630	54932701	.	-	0	Parent=FBgn0034059.1.mrna1;Target=FBgn0034059.1 1 72 +
Chr2	gffcl	locus	54934353	54935242	.	+	.	ID=RLOC_00017460;geneIDs=FBgn0034058.1.path1;transcripts=FBgn0034058.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54934353	54935242	.	+	.	ID=FBgn0034058.1.mrna1;geneID=FBgn0034058.1.path1;Name=FBgn0034058.1;Dir=sensecoverage=100.0;identity=99.9;matches=752;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017460
Chr2	stalkie_big_nohaplotig	exon	54934353	54934432	100	+	.	Parent=FBgn0034058.1.mrna1;Target=FBgn0034058.1 1 80 +
Chr2	stalkie_big_nohaplotig	exon	54934495	54934610	100	+	.	Parent=FBgn0034058.1.mrna1;Target=FBgn0034058.1 81 196 +
Chr2	stalkie_big_nohaplotig	exon	54934686	54935242	99	+	.	Parent=FBgn0034058.1.mrna1;Target=FBgn0034058.1 197 753 +
Chr2	stalkie_big_nohaplotig	CDS	54934353	54934432	.	+	0	Parent=FBgn0034058.1.mrna1;Target=FBgn0034058.1 1 80 +
Chr2	stalkie_big_nohaplotig	CDS	54934495	54934610	.	+	1	Parent=FBgn0034058.1.mrna1;Target=FBgn0034058.1 81 196 +
Chr2	stalkie_big_nohaplotig	CDS	54934686	54935242	.	+	2	Parent=FBgn0034058.1.mrna1;Target=FBgn0034058.1 197 753 +
Chr2	gffcl	locus	54936110	54937279	.	+	.	ID=RLOC_00017461;geneIDs=FBgn0034057.1.path1;transcripts=FBgn0034057.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54936110	54937279	.	+	.	ID=FBgn0034057.1.mrna1;geneID=FBgn0034057.1.path1;Name=FBgn0034057.1;Dir=sensecoverage=100.0;identity=99.9;matches=857;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017461
Chr2	stalkie_big_nohaplotig	exon	54936110	54936190	100	+	.	Parent=FBgn0034057.1.mrna1;Target=FBgn0034057.1 1 81 +
Chr2	stalkie_big_nohaplotig	exon	54936254	54936439	100	+	.	Parent=FBgn0034057.1.mrna1;Target=FBgn0034057.1 82 267 +
Chr2	stalkie_big_nohaplotig	exon	54936510	54936731	99	+	.	Parent=FBgn0034057.1.mrna1;Target=FBgn0034057.1 268 489 +
Chr2	stalkie_big_nohaplotig	exon	54936834	54937046	100	+	.	Parent=FBgn0034057.1.mrna1;Target=FBgn0034057.1 490 702 +
Chr2	stalkie_big_nohaplotig	exon	54937124	54937279	100	+	.	Parent=FBgn0034057.1.mrna1;Target=FBgn0034057.1 703 858 +
Chr2	stalkie_big_nohaplotig	CDS	54936110	54936190	.	+	0	Parent=FBgn0034057.1.mrna1;Target=FBgn0034057.1 1 81 +
Chr2	stalkie_big_nohaplotig	CDS	54936254	54936439	.	+	0	Parent=FBgn0034057.1.mrna1;Target=FBgn0034057.1 82 267 +
Chr2	stalkie_big_nohaplotig	CDS	54936510	54936731	.	+	0	Parent=FBgn0034057.1.mrna1;Target=FBgn0034057.1 268 489 +
Chr2	stalkie_big_nohaplotig	CDS	54936834	54937046	.	+	0	Parent=FBgn0034057.1.mrna1;Target=FBgn0034057.1 490 702 +
Chr2	stalkie_big_nohaplotig	CDS	54937124	54937279	.	+	0	Parent=FBgn0034057.1.mrna1;Target=FBgn0034057.1 703 858 +
Chr2	gffcl	locus	54960146	54960892	.	-	.	ID=RLOC_00017463;geneIDs=comp135690_c0_seq1.path1;transcripts=comp135690_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54960146	54960892	.	-	.	ID=comp135690_c0_seq1.mrna1;geneID=comp135690_c0_seq1.path1;Name=comp135690_c0_seq1;Dir=sensecoverage=99.8;identity=99.6;matches=523;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017463
Chr2	stalkie_big_nohaplotig	exon	54960146	54960389	99	-	.	Parent=comp135690_c0_seq1.mrna1;Target=comp135690_c0_seq1 283 526 +
Chr2	stalkie_big_nohaplotig	exon	54960443	54960552	100	-	.	Parent=comp135690_c0_seq1.mrna1;Target=comp135690_c0_seq1 173 282 +
Chr2	stalkie_big_nohaplotig	exon	54960662	54960678	100	-	.	Parent=comp135690_c0_seq1.mrna1;Target=comp135690_c0_seq1 156 172 +
Chr2	stalkie_big_nohaplotig	exon	54960739	54960892	99	-	.	Parent=comp135690_c0_seq1.mrna1;Target=comp135690_c0_seq1 2 155 +
Chr2	stalkie_big_nohaplotig	CDS	54960281	54960389	.	-	1	Parent=comp135690_c0_seq1.mrna1;Target=comp135690_c0_seq1 283 391 +
Chr2	stalkie_big_nohaplotig	CDS	54960443	54960552	.	-	0	Parent=comp135690_c0_seq1.mrna1;Target=comp135690_c0_seq1 173 282 +
Chr2	stalkie_big_nohaplotig	CDS	54960662	54960678	.	-	2	Parent=comp135690_c0_seq1.mrna1;Target=comp135690_c0_seq1 156 172 +
Chr2	stalkie_big_nohaplotig	CDS	54960739	54960790	.	-	0	Parent=comp135690_c0_seq1.mrna1;Target=comp135690_c0_seq1 104 155 +
Chr2	gffcl	locus	54991010	55048902	.	.	.	ID=RLOC_00017464;geneIDs=FBgn0013988.1.path1,comp116086_c0_seq1.path1,comp163065_c0_seq1.path1,comp163935_c0_seq1.path1;transcripts=comp163935_c0_seq1.mrna1,comp163065_c0_seq1.mrna1,comp116086_c0_seq1.mrna1,FBgn0013988.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	54991010	55010654	.	+	.	ID=comp163935_c0_seq1.mrna1;geneID=comp163935_c0_seq1.path1;Name=comp163935_c0_seq1;Dir=sensecoverage=100.0;identity=98.8;matches=8735;mismatches=85;indels=22;unknowns=0;locus=RLOC_00017464
Chr2	stalkie_big_nohaplotig	exon	54991010	54991842	98	+	.	Parent=comp163935_c0_seq1.mrna1;Target=comp163935_c0_seq1 1 833 +
Chr2	stalkie_big_nohaplotig	exon	54993178	54999701	98	+	.	Parent=comp163935_c0_seq1.mrna1;Target=comp163935_c0_seq1 834 7379 +
Chr2	stalkie_big_nohaplotig	exon	55008917	55009627	99	+	.	Parent=comp163935_c0_seq1.mrna1;Target=comp163935_c0_seq1 7380 8090 +
Chr2	stalkie_big_nohaplotig	exon	55009903	55010654	99	+	.	Parent=comp163935_c0_seq1.mrna1;Target=comp163935_c0_seq1 8091 8842 +
Chr2	stalkie_big_nohaplotig	CDS	54991010	54991842	.	+	0	Parent=comp163935_c0_seq1.mrna1;Target=comp163935_c0_seq1 1 833 +
Chr2	stalkie_big_nohaplotig	CDS	54993178	54999051	.	+	1	Parent=comp163935_c0_seq1.mrna1;Target=comp163935_c0_seq1 834 6729 +
Chr2	stalkie_big_nohaplotig	mRNA	55002123	55048902	.	+	.	ID=comp163065_c0_seq1.mrna1;geneID=comp163065_c0_seq1.path1;Name=comp163065_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=13404;mismatches=33;indels=5;unknowns=0;locus=RLOC_00017464
Chr2	stalkie_big_nohaplotig	exon	55002123	55004703	99	+	.	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 10857 13438 -
Chr2	stalkie_big_nohaplotig	exon	55004774	55005547	100	+	.	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 10083 10856 -
Chr2	stalkie_big_nohaplotig	exon	55005854	55006621	100	+	.	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 9315 10082 -
Chr2	stalkie_big_nohaplotig	exon	55007112	55008722	100	+	.	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 7704 9314 -
Chr2	stalkie_big_nohaplotig	exon	55010960	55011670	100	+	.	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 6993 7703 -
Chr2	stalkie_big_nohaplotig	exon	55011743	55011915	100	+	.	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 6820 6992 -
Chr2	stalkie_big_nohaplotig	exon	55012188	55012441	100	+	.	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 6566 6819 -
Chr2	stalkie_big_nohaplotig	exon	55013906	55015226	99	+	.	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 5245 6565 -
Chr2	stalkie_big_nohaplotig	exon	55015283	55015415	100	+	.	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 5112 5244 -
Chr2	stalkie_big_nohaplotig	exon	55023612	55023780	99	+	.	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 4943 5111 -
Chr2	stalkie_big_nohaplotig	exon	55029380	55029422	97	+	.	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 4900 4942 -
Chr2	stalkie_big_nohaplotig	exon	55029508	55030797	99	+	.	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 3610 4899 -
Chr2	stalkie_big_nohaplotig	exon	55031762	55032080	99	+	.	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 3291 3609 -
Chr2	stalkie_big_nohaplotig	exon	55036076	55036420	100	+	.	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 2946 3290 -
Chr2	stalkie_big_nohaplotig	exon	55043151	55043425	99	+	.	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 2671 2945 -
Chr2	stalkie_big_nohaplotig	exon	55043488	55043714	100	+	.	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 2444 2670 -
Chr2	stalkie_big_nohaplotig	exon	55043855	55044143	100	+	.	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 2155 2443 -
Chr2	stalkie_big_nohaplotig	exon	55044209	55044550	99	+	.	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 1813 2154 -
Chr2	stalkie_big_nohaplotig	exon	55044611	55044890	99	+	.	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 1533 1812 -
Chr2	stalkie_big_nohaplotig	exon	55047287	55048169	99	+	.	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 650 1532 -
Chr2	stalkie_big_nohaplotig	exon	55048250	55048902	99	+	.	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 1 649 -
Chr2	stalkie_big_nohaplotig	CDS	55014058	55015226	.	+	0	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 5245 6413 .
Chr2	stalkie_big_nohaplotig	CDS	55015283	55015415	.	+	1	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 5112 5244 .
Chr2	stalkie_big_nohaplotig	CDS	55023612	55023780	.	+	0	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 4943 5111 .
Chr2	stalkie_big_nohaplotig	CDS	55029380	55029422	.	+	2	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 4900 4942 .
Chr2	stalkie_big_nohaplotig	CDS	55029508	55030797	.	+	1	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 3610 4899 .
Chr2	stalkie_big_nohaplotig	CDS	55031762	55032080	.	+	1	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 3291 3609 .
Chr2	stalkie_big_nohaplotig	CDS	55036076	55036420	.	+	0	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 2946 3290 .
Chr2	stalkie_big_nohaplotig	CDS	55043151	55043425	.	+	0	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 2671 2945 .
Chr2	stalkie_big_nohaplotig	CDS	55043488	55043714	.	+	1	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 2444 2670 .
Chr2	stalkie_big_nohaplotig	CDS	55043855	55044143	.	+	2	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 2155 2443 .
Chr2	stalkie_big_nohaplotig	CDS	55044209	55044550	.	+	1	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 1813 2154 .
Chr2	stalkie_big_nohaplotig	CDS	55044611	55044890	.	+	1	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 1533 1812 .
Chr2	stalkie_big_nohaplotig	CDS	55047287	55048169	.	+	0	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 650 1532 .
Chr2	stalkie_big_nohaplotig	CDS	55048250	55048506	.	+	2	Parent=comp163065_c0_seq1.mrna1;Target=comp163065_c0_seq1 393 649 .
Chr2	stalkie_big_nohaplotig	mRNA	55008699	55008938	.	-	.	ID=comp116086_c0_seq1.mrna1;geneID=comp116086_c0_seq1.path1;Name=comp116086_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=236;mismatches=4;indels=0;unknowns=0;Target=comp116086_c0_seq1 240 1 .;CDS_Target=comp116086_c0_seq1 134 78 .;locus=RLOC_00017464
Chr2	stalkie_big_nohaplotig	exon	55008699	55008938	98	-	.	Parent=comp116086_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55008805	55008861	.	-	0	Parent=comp116086_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55035170	55048503	.	+	.	ID=FBgn0013988.1.mrna1;geneID=FBgn0013988.1.path1;Name=FBgn0013988.1;Dir=sensecoverage=100.0;identity=99.6;matches=2899;mismatches=11;indels=0;unknowns=0;locus=RLOC_00017464
Chr2	stalkie_big_nohaplotig	exon	55035170	55035184	100	+	.	Parent=FBgn0013988.1.mrna1;Target=FBgn0013988.1 1 15 +
Chr2	stalkie_big_nohaplotig	exon	55036076	55036420	100	+	.	Parent=FBgn0013988.1.mrna1;Target=FBgn0013988.1 16 360 +
Chr2	stalkie_big_nohaplotig	exon	55043151	55043425	99	+	.	Parent=FBgn0013988.1.mrna1;Target=FBgn0013988.1 361 635 +
Chr2	stalkie_big_nohaplotig	exon	55043488	55043714	99	+	.	Parent=FBgn0013988.1.mrna1;Target=FBgn0013988.1 636 862 +
Chr2	stalkie_big_nohaplotig	exon	55043855	55044143	100	+	.	Parent=FBgn0013988.1.mrna1;Target=FBgn0013988.1 863 1151 +
Chr2	stalkie_big_nohaplotig	exon	55044209	55044550	99	+	.	Parent=FBgn0013988.1.mrna1;Target=FBgn0013988.1 1152 1493 +
Chr2	stalkie_big_nohaplotig	exon	55044611	55044890	98	+	.	Parent=FBgn0013988.1.mrna1;Target=FBgn0013988.1 1494 1773 +
Chr2	stalkie_big_nohaplotig	exon	55047287	55048169	99	+	.	Parent=FBgn0013988.1.mrna1;Target=FBgn0013988.1 1774 2656 +
Chr2	stalkie_big_nohaplotig	exon	55048250	55048503	99	+	.	Parent=FBgn0013988.1.mrna1;Target=FBgn0013988.1 2657 2910 +
Chr2	stalkie_big_nohaplotig	CDS	55035170	55035184	.	+	0	Parent=FBgn0013988.1.mrna1;Target=FBgn0013988.1 1 15 +
Chr2	stalkie_big_nohaplotig	CDS	55036076	55036420	.	+	0	Parent=FBgn0013988.1.mrna1;Target=FBgn0013988.1 16 360 +
Chr2	stalkie_big_nohaplotig	CDS	55043151	55043425	.	+	0	Parent=FBgn0013988.1.mrna1;Target=FBgn0013988.1 361 635 +
Chr2	stalkie_big_nohaplotig	CDS	55043488	55043714	.	+	1	Parent=FBgn0013988.1.mrna1;Target=FBgn0013988.1 636 862 +
Chr2	stalkie_big_nohaplotig	CDS	55043855	55044143	.	+	2	Parent=FBgn0013988.1.mrna1;Target=FBgn0013988.1 863 1151 +
Chr2	stalkie_big_nohaplotig	CDS	55044209	55044550	.	+	1	Parent=FBgn0013988.1.mrna1;Target=FBgn0013988.1 1152 1493 +
Chr2	stalkie_big_nohaplotig	CDS	55044611	55044890	.	+	1	Parent=FBgn0013988.1.mrna1;Target=FBgn0013988.1 1494 1773 +
Chr2	stalkie_big_nohaplotig	CDS	55047287	55048169	.	+	0	Parent=FBgn0013988.1.mrna1;Target=FBgn0013988.1 1774 2656 +
Chr2	stalkie_big_nohaplotig	CDS	55048250	55048503	.	+	2	Parent=FBgn0013988.1.mrna1;Target=FBgn0013988.1 2657 2910 +
Chr2	gffcl	locus	55001564	55001745	.	+	.	ID=RLOC_00017465;geneIDs=comp149356_c1_seq1.path1;transcripts=comp149356_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55001564	55001745	.	+	.	ID=comp149356_c1_seq1.mrna1;geneID=comp149356_c1_seq1.path1;Name=comp149356_c1_seq1;Dir=indeterminatecoverage=44.9;identity=98.9;matches=180;mismatches=2;indels=0;unknowns=0;Target=comp149356_c1_seq1 182 1 .;CDS_Target=comp149356_c1_seq1 181 2 .;locus=RLOC_00017465
Chr2	stalkie_big_nohaplotig	exon	55001564	55001745	98	+	.	Parent=comp149356_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55001565	55001744	.	+	0	Parent=comp149356_c1_seq1.mrna1
Chr2	gffcl	locus	55023860	55025396	.	-	.	ID=RLOC_00017466;geneIDs=FBgn0034054.1.path1;transcripts=FBgn0034054.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55023860	55025396	.	-	.	ID=FBgn0034054.1.mrna1;geneID=FBgn0034054.1.path1;Name=FBgn0034054.1;Dir=sensecoverage=100.0;identity=99.9;matches=1403;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017466
Chr2	stalkie_big_nohaplotig	exon	55023860	55024890	99	-	.	Parent=FBgn0034054.1.mrna1;Target=FBgn0034054.1 374 1404 +
Chr2	stalkie_big_nohaplotig	exon	55024965	55025155	100	-	.	Parent=FBgn0034054.1.mrna1;Target=FBgn0034054.1 183 373 +
Chr2	stalkie_big_nohaplotig	exon	55025215	55025396	100	-	.	Parent=FBgn0034054.1.mrna1;Target=FBgn0034054.1 1 182 +
Chr2	stalkie_big_nohaplotig	CDS	55023860	55024890	.	-	2	Parent=FBgn0034054.1.mrna1;Target=FBgn0034054.1 374 1404 +
Chr2	stalkie_big_nohaplotig	CDS	55024965	55025155	.	-	1	Parent=FBgn0034054.1.mrna1;Target=FBgn0034054.1 183 373 +
Chr2	stalkie_big_nohaplotig	CDS	55025215	55025396	.	-	0	Parent=FBgn0034054.1.mrna1;Target=FBgn0034054.1 1 182 +
Chr2	gffcl	locus	55045355	55045924	.	-	.	ID=RLOC_00017467;geneIDs=comp148265_c0_seq1.path1;transcripts=comp148265_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55045355	55045924	.	-	.	ID=comp148265_c0_seq1.mrna1;geneID=comp148265_c0_seq1.path1;Name=comp148265_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=566;mismatches=4;indels=0;unknowns=0;Target=comp148265_c0_seq1 570 1 .;CDS_Target=comp148265_c0_seq1 422 297 .;locus=RLOC_00017467
Chr2	stalkie_big_nohaplotig	exon	55045355	55045924	99	-	.	Parent=comp148265_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55045503	55045628	.	-	0	Parent=comp148265_c0_seq1.mrna1
Chr2	gffcl	locus	55050805	55061718	.	-	.	ID=RLOC_00017468;geneIDs=FBgn0034053.1.path1;transcripts=FBgn0034053.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55050805	55061718	.	-	.	ID=FBgn0034053.1.mrna1;geneID=FBgn0034053.1.path1;Name=FBgn0034053.1;Dir=sensecoverage=100.0;identity=100.0;matches=1557;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017468
Chr2	stalkie_big_nohaplotig	exon	55050805	55051693	100	-	.	Parent=FBgn0034053.1.mrna1;Target=FBgn0034053.1 669 1557 +
Chr2	stalkie_big_nohaplotig	exon	55051764	55051830	100	-	.	Parent=FBgn0034053.1.mrna1;Target=FBgn0034053.1 602 668 +
Chr2	stalkie_big_nohaplotig	exon	55051915	55052295	100	-	.	Parent=FBgn0034053.1.mrna1;Target=FBgn0034053.1 221 601 +
Chr2	stalkie_big_nohaplotig	exon	55052364	55052535	100	-	.	Parent=FBgn0034053.1.mrna1;Target=FBgn0034053.1 49 220 +
Chr2	stalkie_big_nohaplotig	exon	55061671	55061718	100	-	.	Parent=FBgn0034053.1.mrna1;Target=FBgn0034053.1 1 48 +
Chr2	stalkie_big_nohaplotig	CDS	55050805	55051693	.	-	1	Parent=FBgn0034053.1.mrna1;Target=FBgn0034053.1 669 1557 +
Chr2	stalkie_big_nohaplotig	CDS	55051764	55051830	.	-	2	Parent=FBgn0034053.1.mrna1;Target=FBgn0034053.1 602 668 +
Chr2	stalkie_big_nohaplotig	CDS	55051915	55052295	.	-	2	Parent=FBgn0034053.1.mrna1;Target=FBgn0034053.1 221 601 +
Chr2	stalkie_big_nohaplotig	CDS	55052364	55052535	.	-	0	Parent=FBgn0034053.1.mrna1;Target=FBgn0034053.1 49 220 +
Chr2	stalkie_big_nohaplotig	CDS	55061671	55061718	.	-	0	Parent=FBgn0034053.1.mrna1;Target=FBgn0034053.1 1 48 +
Chr2	gffcl	locus	55069498	55085545	.	-	.	ID=RLOC_00017469;geneIDs=FBgn0043792.1.path1;transcripts=FBgn0043792.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55069498	55085545	.	-	.	ID=FBgn0043792.1.mrna1;geneID=FBgn0043792.1.path1;Name=FBgn0043792.1;Dir=sensecoverage=96.3;identity=100.0;matches=1497;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017469
Chr2	stalkie_big_nohaplotig	exon	55069498	55069582	100	-	.	Parent=FBgn0043792.1.mrna1;Target=FBgn0043792.1 1470 1554 +
Chr2	stalkie_big_nohaplotig	exon	55069647	55069772	100	-	.	Parent=FBgn0043792.1.mrna1;Target=FBgn0043792.1 1344 1469 +
Chr2	stalkie_big_nohaplotig	exon	55071520	55071651	100	-	.	Parent=FBgn0043792.1.mrna1;Target=FBgn0043792.1 1212 1343 +
Chr2	stalkie_big_nohaplotig	exon	55071777	55071920	100	-	.	Parent=FBgn0043792.1.mrna1;Target=FBgn0043792.1 1068 1211 +
Chr2	stalkie_big_nohaplotig	exon	55072645	55072740	100	-	.	Parent=FBgn0043792.1.mrna1;Target=FBgn0043792.1 972 1067 +
Chr2	stalkie_big_nohaplotig	exon	55072805	55073003	100	-	.	Parent=FBgn0043792.1.mrna1;Target=FBgn0043792.1 773 971 +
Chr2	stalkie_big_nohaplotig	exon	55084687	55085112	100	-	.	Parent=FBgn0043792.1.mrna1;Target=FBgn0043792.1 347 772 +
Chr2	stalkie_big_nohaplotig	exon	55085172	55085250	100	-	.	Parent=FBgn0043792.1.mrna1;Target=FBgn0043792.1 268 346 +
Chr2	stalkie_big_nohaplotig	exon	55085336	55085545	100	-	.	Parent=FBgn0043792.1.mrna1;Target=FBgn0043792.1 58 267 +
Chr2	stalkie_big_nohaplotig	CDS	55069498	55069582	.	-	1	Parent=FBgn0043792.1.mrna1;Target=FBgn0043792.1 1470 1554 +
Chr2	stalkie_big_nohaplotig	CDS	55069647	55069772	.	-	1	Parent=FBgn0043792.1.mrna1;Target=FBgn0043792.1 1344 1469 +
Chr2	stalkie_big_nohaplotig	CDS	55071520	55071651	.	-	1	Parent=FBgn0043792.1.mrna1;Target=FBgn0043792.1 1212 1343 +
Chr2	stalkie_big_nohaplotig	CDS	55071777	55071920	.	-	1	Parent=FBgn0043792.1.mrna1;Target=FBgn0043792.1 1068 1211 +
Chr2	stalkie_big_nohaplotig	CDS	55072645	55072740	.	-	1	Parent=FBgn0043792.1.mrna1;Target=FBgn0043792.1 972 1067 +
Chr2	stalkie_big_nohaplotig	CDS	55072805	55073003	.	-	2	Parent=FBgn0043792.1.mrna1;Target=FBgn0043792.1 773 971 +
Chr2	stalkie_big_nohaplotig	CDS	55084687	55085112	.	-	2	Parent=FBgn0043792.1.mrna1;Target=FBgn0043792.1 347 772 +
Chr2	stalkie_big_nohaplotig	CDS	55085172	55085250	.	-	0	Parent=FBgn0043792.1.mrna1;Target=FBgn0043792.1 268 346 +
Chr2	stalkie_big_nohaplotig	CDS	55085336	55085545	.	-	0	Parent=FBgn0043792.1.mrna1;Target=FBgn0043792.1 58 267 +
Chr2	gffcl	locus	55128097	55129144	.	+	.	ID=RLOC_00017470;geneIDs=FBgn0022343.1.path1;transcripts=FBgn0022343.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55128097	55129144	.	+	.	ID=FBgn0022343.1.mrna1;geneID=FBgn0022343.1.path1;Name=FBgn0022343.1;Dir=sensecoverage=100.0;identity=99.9;matches=833;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017470
Chr2	stalkie_big_nohaplotig	exon	55128097	55128203	100	+	.	Parent=FBgn0022343.1.mrna1;Target=FBgn0022343.1 1 107 +
Chr2	stalkie_big_nohaplotig	exon	55128295	55128511	99	+	.	Parent=FBgn0022343.1.mrna1;Target=FBgn0022343.1 108 324 +
Chr2	stalkie_big_nohaplotig	exon	55128574	55128858	100	+	.	Parent=FBgn0022343.1.mrna1;Target=FBgn0022343.1 325 609 +
Chr2	stalkie_big_nohaplotig	exon	55128920	55129144	100	+	.	Parent=FBgn0022343.1.mrna1;Target=FBgn0022343.1 610 834 +
Chr2	stalkie_big_nohaplotig	CDS	55128097	55128203	.	+	0	Parent=FBgn0022343.1.mrna1;Target=FBgn0022343.1 1 107 +
Chr2	stalkie_big_nohaplotig	CDS	55128295	55128511	.	+	1	Parent=FBgn0022343.1.mrna1;Target=FBgn0022343.1 108 324 +
Chr2	stalkie_big_nohaplotig	CDS	55128574	55128858	.	+	0	Parent=FBgn0022343.1.mrna1;Target=FBgn0022343.1 325 609 +
Chr2	stalkie_big_nohaplotig	CDS	55128920	55129144	.	+	0	Parent=FBgn0022343.1.mrna1;Target=FBgn0022343.1 610 834 +
Chr2	gffcl	locus	55129844	55131112	.	-	.	ID=RLOC_00017471;geneIDs=FBgn0035082.1.path1;transcripts=FBgn0035082.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55129844	55131112	.	-	.	ID=FBgn0035082.1.mrna1;geneID=FBgn0035082.1.path1;Name=FBgn0035082.1;Dir=sensecoverage=97.5;identity=99.4;matches=494;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017471
Chr2	stalkie_big_nohaplotig	exon	55129844	55129997	100	-	.	Parent=FBgn0035082.1.mrna1;Target=FBgn0035082.1 357 510 +
Chr2	stalkie_big_nohaplotig	exon	55130770	55131112	99	-	.	Parent=FBgn0035082.1.mrna1;Target=FBgn0035082.1 14 356 +
Chr2	stalkie_big_nohaplotig	CDS	55129844	55129997	.	-	1	Parent=FBgn0035082.1.mrna1;Target=FBgn0035082.1 357 510 +
Chr2	stalkie_big_nohaplotig	CDS	55130770	55131110	.	-	0	Parent=FBgn0035082.1.mrna1;Target=FBgn0035082.1 16 356 +
Chr2	gffcl	locus	55132720	55141163	.	-	.	ID=RLOC_00017472;geneIDs=FBgn0035083.1.path1;transcripts=FBgn0035083.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55132720	55141163	.	-	.	ID=FBgn0035083.1.mrna1;geneID=FBgn0035083.1.path1;Name=FBgn0035083.1;Dir=sensecoverage=100.0;identity=99.8;matches=518;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017472
Chr2	stalkie_big_nohaplotig	exon	55132720	55132891	100	-	.	Parent=FBgn0035083.1.mrna1;Target=FBgn0035083.1 348 519 +
Chr2	stalkie_big_nohaplotig	exon	55132951	55133270	99	-	.	Parent=FBgn0035083.1.mrna1;Target=FBgn0035083.1 28 347 +
Chr2	stalkie_big_nohaplotig	exon	55141137	55141163	100	-	.	Parent=FBgn0035083.1.mrna1;Target=FBgn0035083.1 1 27 +
Chr2	stalkie_big_nohaplotig	CDS	55132720	55132891	.	-	1	Parent=FBgn0035083.1.mrna1;Target=FBgn0035083.1 348 519 +
Chr2	stalkie_big_nohaplotig	CDS	55132951	55133270	.	-	0	Parent=FBgn0035083.1.mrna1;Target=FBgn0035083.1 28 347 +
Chr2	stalkie_big_nohaplotig	CDS	55141137	55141163	.	-	0	Parent=FBgn0035083.1.mrna1;Target=FBgn0035083.1 1 27 +
Chr2	gffcl	locus	55139135	55139618	.	-	.	ID=RLOC_00017473;geneIDs=comp149597_c0_seq1.path1;transcripts=comp149597_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55139135	55139618	.	-	.	ID=comp149597_c0_seq1.mrna1;geneID=comp149597_c0_seq1.path1;Name=comp149597_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.2;matches=473;mismatches=11;indels=13;unknowns=0;Target=comp149597_c0_seq1 497 1 .;CDS_Target=comp149597_c0_seq1 313 254 .;locus=RLOC_00017473
Chr2	stalkie_big_nohaplotig	exon	55139135	55139618	95	-	.	Parent=comp149597_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55139319	55139378	.	-	0	Parent=comp149597_c0_seq1.mrna1
Chr2	gffcl	locus	55162958	55163709	.	+	.	ID=RLOC_00017474;geneIDs=FBgn0035085.1.path1;transcripts=FBgn0035085.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55162958	55163709	.	+	.	ID=FBgn0035085.1.mrna1;geneID=FBgn0035085.1.path1;Name=FBgn0035085.1;Dir=sensecoverage=100.0;identity=99.7;matches=688;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017474
Chr2	stalkie_big_nohaplotig	exon	55162958	55163393	99	+	.	Parent=FBgn0035085.1.mrna1;Target=FBgn0035085.1 1 436 +
Chr2	stalkie_big_nohaplotig	exon	55163456	55163709	100	+	.	Parent=FBgn0035085.1.mrna1;Target=FBgn0035085.1 437 690 +
Chr2	stalkie_big_nohaplotig	CDS	55162958	55163393	.	+	0	Parent=FBgn0035085.1.mrna1;Target=FBgn0035085.1 1 436 +
Chr2	stalkie_big_nohaplotig	CDS	55163456	55163709	.	+	2	Parent=FBgn0035085.1.mrna1;Target=FBgn0035085.1 437 690 +
Chr2	gffcl	locus	55164127	55165524	.	-	.	ID=RLOC_00017475;geneIDs=FBgn0027599.1.path1;transcripts=FBgn0027599.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55164127	55165524	.	-	.	ID=FBgn0027599.1.mrna1;geneID=FBgn0027599.1.path1;Name=FBgn0027599.1;Dir=sensecoverage=100.0;identity=99.2;matches=1330;mismatches=10;indels=1;unknowns=0;locus=RLOC_00017475
Chr2	stalkie_big_nohaplotig	exon	55164127	55164857	98	-	.	Parent=FBgn0027599.1.mrna1;Target=FBgn0027599.1 610 1341 +
Chr2	stalkie_big_nohaplotig	exon	55164916	55165524	99	-	.	Parent=FBgn0027599.1.mrna1;Target=FBgn0027599.1 1 609 +
Chr2	stalkie_big_nohaplotig	CDS	55164127	55164857	.	-	0	Parent=FBgn0027599.1.mrna1;Target=FBgn0027599.1 610 1341 +
Chr2	stalkie_big_nohaplotig	CDS	55164916	55165524	.	-	0	Parent=FBgn0027599.1.mrna1;Target=FBgn0027599.1 1 609 +
Chr2	gffcl	locus	55185593	55188703	.	+	.	ID=RLOC_00017476;geneIDs=FBgn0035086.path1;transcripts=FBgn0035086.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55185593	55188703	.	+	.	ID=FBgn0035086.mrna1;geneID=FBgn0035086.path1;Name=FBgn0035086;Dir=sensecoverage=99.8;identity=99.8;matches=1266;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017476
Chr2	stalkie_big_nohaplotig	exon	55185593	55185771	99	+	.	Parent=FBgn0035086.mrna1;Target=FBgn0035086 4 182 +
Chr2	stalkie_big_nohaplotig	exon	55185889	55186182	100	+	.	Parent=FBgn0035086.mrna1;Target=FBgn0035086 183 476 +
Chr2	stalkie_big_nohaplotig	exon	55186287	55186757	99	+	.	Parent=FBgn0035086.mrna1;Target=FBgn0035086 477 947 +
Chr2	stalkie_big_nohaplotig	exon	55188217	55188411	100	+	.	Parent=FBgn0035086.mrna1;Target=FBgn0035086 948 1142 +
Chr2	stalkie_big_nohaplotig	exon	55188574	55188703	99	+	.	Parent=FBgn0035086.mrna1;Target=FBgn0035086 1143 1272 +
Chr2	stalkie_big_nohaplotig	CDS	55185593	55185771	.	+	0	Parent=FBgn0035086.mrna1;Target=FBgn0035086 4 182 +
Chr2	stalkie_big_nohaplotig	CDS	55185889	55186182	.	+	1	Parent=FBgn0035086.mrna1;Target=FBgn0035086 183 476 +
Chr2	stalkie_big_nohaplotig	CDS	55186287	55186757	.	+	1	Parent=FBgn0035086.mrna1;Target=FBgn0035086 477 947 +
Chr2	stalkie_big_nohaplotig	CDS	55188217	55188411	.	+	1	Parent=FBgn0035086.mrna1;Target=FBgn0035086 948 1142 +
Chr2	stalkie_big_nohaplotig	CDS	55188574	55188703	.	+	1	Parent=FBgn0035086.mrna1;Target=FBgn0035086 1143 1272 +
Chr2	gffcl	locus	55191242	55193023	.	-	.	ID=RLOC_00017477;geneIDs=comp155689_c0_seq1.path1,comp160198_c0_seq1.path1;transcripts=comp160198_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55191760	55193023	.	-	.	ID=comp160198_c0_seq1.mrna1;geneID=comp160198_c0_seq1.path1;Name=comp160198_c0_seq1;Dir=indeterminatecoverage=99.9;identity=95.1;matches=1212;mismatches=44;indels=18;unknowns=0;Target=comp160198_c0_seq1 1267 2 .;CDS_Target=comp160198_c0_seq1 743 648 .;locus=RLOC_00017477
Chr2	stalkie_big_nohaplotig	exon	55191760	55193023	95	-	.	Parent=comp160198_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55192285	55192380	.	-	0	Parent=comp160198_c0_seq1.mrna1
Chr2	gffcl	locus	55193127	55193323	.	-	.	ID=RLOC_00017478;geneIDs=comp116647_c0_seq1.path1;transcripts=comp116647_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55193127	55193323	.	-	.	ID=comp116647_c0_seq1.mrna1;geneID=comp116647_c0_seq1.path1;Name=comp116647_c0_seq1;Dir=indeterminatecoverage=89.1;identity=98.5;matches=194;mismatches=3;indels=0;unknowns=0;Target=comp116647_c0_seq1 197 1 .;CDS_Target=comp116647_c0_seq1 110 54 .;locus=RLOC_00017478
Chr2	stalkie_big_nohaplotig	exon	55193127	55193323	98	-	.	Parent=comp116647_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55193214	55193270	.	-	0	Parent=comp116647_c0_seq1.mrna1
Chr2	gffcl	locus	55193543	55193846	.	+	.	ID=RLOC_00017479;geneIDs=comp201023_c0_seq1.path1;transcripts=comp201023_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55193543	55193846	.	+	.	ID=comp201023_c0_seq1.mrna1;geneID=comp201023_c0_seq1.path1;Name=comp201023_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=303;mismatches=1;indels=0;unknowns=0;Target=comp201023_c0_seq1 304 1 .;CDS_Target=comp201023_c0_seq1 214 122 .;locus=RLOC_00017479
Chr2	stalkie_big_nohaplotig	exon	55193543	55193846	99	+	.	Parent=comp201023_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55193664	55193756	.	+	0	Parent=comp201023_c0_seq1.mrna1
Chr2	gffcl	locus	55200585	55201257	.	+	.	ID=RLOC_00017480;geneIDs=comp160298_c2_seq1.path1;transcripts=comp160298_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55200585	55201257	.	+	.	ID=comp160298_c2_seq1.mrna1;geneID=comp160298_c2_seq1.path1;Name=comp160298_c2_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=666;mismatches=7;indels=1;unknowns=0;Target=comp160298_c2_seq1 674 1 .;CDS_Target=comp160298_c2_seq1 41 3 .;locus=RLOC_00017480
Chr2	stalkie_big_nohaplotig	exon	55200585	55201257	98	+	.	Parent=comp160298_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55200587	55200625	.	+	0	Parent=comp160298_c2_seq1.mrna1
Chr2	gffcl	locus	55202125	55202325	.	+	.	ID=RLOC_00017481;geneIDs=comp145913_c0_seq1.path2;transcripts=comp145913_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	55202125	55202325	.	+	.	ID=comp145913_c0_seq1.mrna2;geneID=comp145913_c0_seq1.path2;Name=comp145913_c0_seq1;Dir=indeterminatecoverage=62.2;identity=100.0;matches=201;mismatches=0;indels=0;unknowns=0;Target=comp145913_c0_seq1 323 123 .;locus=RLOC_00017481
Chr2	stalkie_big_nohaplotig	exon	55202125	55202325	100	+	.	Parent=comp145913_c0_seq1.mrna2
Chr2	gffcl	locus	55202701	55203132	.	+	.	ID=RLOC_00017482;geneIDs=comp140339_c0_seq1.path1;transcripts=comp140339_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55202701	55203132	.	+	.	ID=comp140339_c0_seq1.mrna1;geneID=comp140339_c0_seq1.path1;Name=comp140339_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=427;mismatches=1;indels=5;unknowns=0;Target=comp140339_c0_seq1 429 1 .;CDS_Target=comp140339_c0_seq1 82 2 .;locus=RLOC_00017482
Chr2	stalkie_big_nohaplotig	exon	55202701	55203132	98	+	.	Parent=comp140339_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55202702	55202782	.	+	0	Parent=comp140339_c0_seq1.mrna1
Chr2	gffcl	locus	55240161	55241083	.	+	.	ID=RLOC_00017484;geneIDs=comp153880_c1_seq1.path1;transcripts=comp153880_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55240161	55241083	.	+	.	ID=comp153880_c1_seq1.mrna1;geneID=comp153880_c1_seq1.path1;Name=comp153880_c1_seq1;Dir=indeterminatecoverage=97.7;identity=99.1;matches=916;mismatches=7;indels=1;unknowns=0;Target=comp153880_c1_seq1 924 1 .;CDS_Target=comp153880_c1_seq1 276 160 .;locus=RLOC_00017484
Chr2	stalkie_big_nohaplotig	exon	55240161	55241083	99	+	.	Parent=comp153880_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55240319	55240435	.	+	0	Parent=comp153880_c1_seq1.mrna1
Chr2	gffcl	locus	55262621	55264173	.	-	.	ID=RLOC_00017485;geneIDs=comp159536_c0_seq1.path1;transcripts=comp159536_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55262621	55264173	.	-	.	ID=comp159536_c0_seq1.mrna1;geneID=comp159536_c0_seq1.path1;Name=comp159536_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1549;mismatches=3;indels=1;unknowns=0;Target=comp159536_c0_seq1 1552 1 .;CDS_Target=comp159536_c0_seq1 1100 975 .;locus=RLOC_00017485
Chr2	stalkie_big_nohaplotig	exon	55262621	55264173	99	-	.	Parent=comp159536_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55263074	55263199	.	-	0	Parent=comp159536_c0_seq1.mrna1
Chr2	gffcl	locus	55267460	55267911	.	-	.	ID=RLOC_00017486;geneIDs=comp117069_c0_seq1.path1;transcripts=comp117069_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55267460	55267911	.	-	.	ID=comp117069_c0_seq1.mrna1;geneID=comp117069_c0_seq1.path1;Name=comp117069_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=452;mismatches=0;indels=0;unknowns=0;Target=comp117069_c0_seq1 452 1 .;CDS_Target=comp117069_c0_seq1 276 58 .;locus=RLOC_00017486
Chr2	stalkie_big_nohaplotig	exon	55267460	55267911	100	-	.	Parent=comp117069_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55267636	55267854	.	-	0	Parent=comp117069_c0_seq1.mrna1
Chr2	gffcl	locus	55268469	55269090	.	-	.	ID=RLOC_00017487;geneIDs=comp149714_c1_seq1.path1;transcripts=comp149714_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55268469	55269090	.	-	.	ID=comp149714_c1_seq1.mrna1;geneID=comp149714_c1_seq1.path1;Name=comp149714_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=622;mismatches=0;indels=0;unknowns=0;Target=comp149714_c1_seq1 622 1 .;CDS_Target=comp149714_c1_seq1 93 1 .;locus=RLOC_00017487
Chr2	stalkie_big_nohaplotig	exon	55268469	55269090	100	-	.	Parent=comp149714_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55268998	55269090	.	-	0	Parent=comp149714_c1_seq1.mrna1
Chr2	gffcl	locus	55270463	55284345	.	-	.	ID=RLOC_00017488;geneIDs=FBgn0034046.1.path1;transcripts=FBgn0034046.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55270463	55284345	.	-	.	ID=FBgn0034046.1.mrna1;geneID=FBgn0034046.1.path1;Name=FBgn0034046.1;Dir=sensecoverage=100.0;identity=99.6;matches=672;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017488
Chr2	stalkie_big_nohaplotig	exon	55270463	55270593	98	-	.	Parent=FBgn0034046.1.mrna1;Target=FBgn0034046.1 545 675 +
Chr2	stalkie_big_nohaplotig	exon	55270686	55270810	99	-	.	Parent=FBgn0034046.1.mrna1;Target=FBgn0034046.1 420 544 +
Chr2	stalkie_big_nohaplotig	exon	55271052	55271200	100	-	.	Parent=FBgn0034046.1.mrna1;Target=FBgn0034046.1 271 419 +
Chr2	stalkie_big_nohaplotig	exon	55274739	55274892	100	-	.	Parent=FBgn0034046.1.mrna1;Target=FBgn0034046.1 117 270 +
Chr2	stalkie_big_nohaplotig	exon	55284230	55284345	100	-	.	Parent=FBgn0034046.1.mrna1;Target=FBgn0034046.1 1 116 +
Chr2	stalkie_big_nohaplotig	CDS	55270463	55270593	.	-	2	Parent=FBgn0034046.1.mrna1;Target=FBgn0034046.1 545 675 +
Chr2	stalkie_big_nohaplotig	CDS	55270686	55270810	.	-	1	Parent=FBgn0034046.1.mrna1;Target=FBgn0034046.1 420 544 +
Chr2	stalkie_big_nohaplotig	CDS	55271052	55271200	.	-	0	Parent=FBgn0034046.1.mrna1;Target=FBgn0034046.1 271 419 +
Chr2	stalkie_big_nohaplotig	CDS	55274739	55274892	.	-	1	Parent=FBgn0034046.1.mrna1;Target=FBgn0034046.1 117 270 +
Chr2	stalkie_big_nohaplotig	CDS	55284230	55284345	.	-	0	Parent=FBgn0034046.1.mrna1;Target=FBgn0034046.1 1 116 +
Chr2	gffcl	locus	55288664	55289048	.	+	.	ID=RLOC_00017489;geneIDs=comp144803_c0_seq1.path1;transcripts=comp144803_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55288664	55289048	.	+	.	ID=comp144803_c0_seq1.mrna1;geneID=comp144803_c0_seq1.path1;Name=comp144803_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=378;mismatches=7;indels=1;unknowns=0;Target=comp144803_c0_seq1 386 1 .;CDS_Target=comp144803_c0_seq1 77 3 .;locus=RLOC_00017489
Chr2	stalkie_big_nohaplotig	exon	55288664	55289048	97	+	.	Parent=comp144803_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55288666	55288740	.	+	0	Parent=comp144803_c0_seq1.mrna1
Chr2	gffcl	locus	55293624	55294935	.	+	.	ID=RLOC_00017490;geneIDs=comp158035_c0_seq1.path1;transcripts=comp158035_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55293624	55294935	.	+	.	ID=comp158035_c0_seq1.mrna1;geneID=comp158035_c0_seq1.path1;Name=comp158035_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=1294;mismatches=11;indels=19;unknowns=0;Target=comp158035_c0_seq1 1317 1 .;CDS_Target=comp158035_c0_seq1 996 907 .;locus=RLOC_00017490
Chr2	stalkie_big_nohaplotig	exon	55293624	55294935	97	+	.	Parent=comp158035_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55294525	55294614	.	+	0	Parent=comp158035_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55339473	55342634	.	+	.	ID=FBgn0034045.2.mrna1;geneID=FBgn0034045.2.path1;Name=FBgn0034045.2;Dir=sensecoverage=100.0;identity=96.8;matches=1513;mismatches=50;indels=0;unknowns=0;locus=RLOC_00017491
Chr2	stalkie_big_nohaplotig	exon	55339473	55339752	99	+	.	Parent=FBgn0034045.2.mrna1;Target=FBgn0034045.2 1 280 +
Chr2	stalkie_big_nohaplotig	exon	55341218	55341409	100	+	.	Parent=FBgn0034045.2.mrna1;Target=FBgn0034045.2 281 472 +
Chr2	stalkie_big_nohaplotig	exon	55341483	55341791	97	+	.	Parent=FBgn0034045.2.mrna1;Target=FBgn0034045.2 473 781 +
Chr2	stalkie_big_nohaplotig	exon	55341853	55342634	94	+	.	Parent=FBgn0034045.2.mrna1;Target=FBgn0034045.2 782 1563 +
Chr2	stalkie_big_nohaplotig	CDS	55339473	55339752	.	+	0	Parent=FBgn0034045.2.mrna1;Target=FBgn0034045.2 1 280 +
Chr2	stalkie_big_nohaplotig	CDS	55341218	55341409	.	+	2	Parent=FBgn0034045.2.mrna1;Target=FBgn0034045.2 281 472 +
Chr2	stalkie_big_nohaplotig	CDS	55341483	55341791	.	+	2	Parent=FBgn0034045.2.mrna1;Target=FBgn0034045.2 473 781 +
Chr2	stalkie_big_nohaplotig	CDS	55341853	55342634	.	+	2	Parent=FBgn0034045.2.mrna1;Target=FBgn0034045.2 782 1563 +
Chr2	gffcl	locus	55361158	55363135	.	+	.	ID=RLOC_00017493;geneIDs=FBgn0029932.1.path1;transcripts=FBgn0029932.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55361158	55363135	.	+	.	ID=FBgn0029932.1.mrna1;geneID=FBgn0029932.1.path1;Name=FBgn0029932.1;Dir=sensecoverage=95.3;identity=99.7;matches=1647;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017493
Chr2	stalkie_big_nohaplotig	exon	55361158	55361336	98	+	.	Parent=FBgn0029932.1.mrna1;Target=FBgn0029932.1 83 261 +
Chr2	stalkie_big_nohaplotig	exon	55361411	55361546	100	+	.	Parent=FBgn0029932.1.mrna1;Target=FBgn0029932.1 262 397 +
Chr2	stalkie_big_nohaplotig	exon	55361601	55361795	100	+	.	Parent=FBgn0029932.1.mrna1;Target=FBgn0029932.1 398 592 +
Chr2	stalkie_big_nohaplotig	exon	55361873	55362021	100	+	.	Parent=FBgn0029932.1.mrna1;Target=FBgn0029932.1 593 741 +
Chr2	stalkie_big_nohaplotig	exon	55362083	55362242	100	+	.	Parent=FBgn0029932.1.mrna1;Target=FBgn0029932.1 742 901 +
Chr2	stalkie_big_nohaplotig	exon	55362303	55363135	99	+	.	Parent=FBgn0029932.1.mrna1;Target=FBgn0029932.1 902 1734 +
Chr2	stalkie_big_nohaplotig	CDS	55361160	55361336	.	+	0	Parent=FBgn0029932.1.mrna1;Target=FBgn0029932.1 85 261 +
Chr2	stalkie_big_nohaplotig	CDS	55361411	55361546	.	+	0	Parent=FBgn0029932.1.mrna1;Target=FBgn0029932.1 262 397 +
Chr2	stalkie_big_nohaplotig	CDS	55361601	55361795	.	+	2	Parent=FBgn0029932.1.mrna1;Target=FBgn0029932.1 398 592 +
Chr2	stalkie_big_nohaplotig	CDS	55361873	55362021	.	+	2	Parent=FBgn0029932.1.mrna1;Target=FBgn0029932.1 593 741 +
Chr2	stalkie_big_nohaplotig	CDS	55362083	55362242	.	+	0	Parent=FBgn0029932.1.mrna1;Target=FBgn0029932.1 742 901 +
Chr2	stalkie_big_nohaplotig	CDS	55362303	55363135	.	+	2	Parent=FBgn0029932.1.mrna1;Target=FBgn0029932.1 902 1734 +
Chr2	gffcl	locus	55374638	55415266	.	-	.	ID=RLOC_00017494;geneIDs=FBgn0033494.1.path1;transcripts=FBgn0033494.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55374638	55415266	.	-	.	ID=FBgn0033494.1.mrna1;geneID=FBgn0033494.1.path1;Name=FBgn0033494.1;Dir=sensecoverage=95.8;identity=99.9;matches=2311;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017494
Chr2	stalkie_big_nohaplotig	exon	55374638	55374724	100	-	.	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 2329 2415 +
Chr2	stalkie_big_nohaplotig	exon	55374836	55375035	99	-	.	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 2129 2328 +
Chr2	stalkie_big_nohaplotig	exon	55375154	55375275	100	-	.	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 2007 2128 +
Chr2	stalkie_big_nohaplotig	exon	55375349	55375470	100	-	.	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 1885 2006 +
Chr2	stalkie_big_nohaplotig	exon	55375624	55375872	100	-	.	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 1636 1884 +
Chr2	stalkie_big_nohaplotig	exon	55375945	55376041	100	-	.	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 1539 1635 +
Chr2	stalkie_big_nohaplotig	exon	55377450	55377577	100	-	.	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 1411 1538 +
Chr2	stalkie_big_nohaplotig	exon	55377682	55377752	100	-	.	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 1340 1410 +
Chr2	stalkie_big_nohaplotig	exon	55386789	55386976	100	-	.	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 1152 1339 +
Chr2	stalkie_big_nohaplotig	exon	55395937	55395981	100	-	.	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 1107 1151 +
Chr2	stalkie_big_nohaplotig	exon	55403492	55403679	100	-	.	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 919 1106 +
Chr2	stalkie_big_nohaplotig	exon	55403743	55403853	99	-	.	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 808 918 +
Chr2	stalkie_big_nohaplotig	exon	55403932	55404057	100	-	.	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 682 807 +
Chr2	stalkie_big_nohaplotig	exon	55404766	55404941	100	-	.	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 506 681 +
Chr2	stalkie_big_nohaplotig	exon	55405032	55405114	100	-	.	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 423 505 +
Chr2	stalkie_big_nohaplotig	exon	55410199	55410333	100	-	.	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 288 422 +
Chr2	stalkie_big_nohaplotig	exon	55415081	55415266	100	-	.	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 102 287 +
Chr2	stalkie_big_nohaplotig	CDS	55374638	55374724	.	-	0	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 2329 2415 +
Chr2	stalkie_big_nohaplotig	CDS	55374836	55375035	.	-	2	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 2129 2328 +
Chr2	stalkie_big_nohaplotig	CDS	55375154	55375275	.	-	1	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 2007 2128 +
Chr2	stalkie_big_nohaplotig	CDS	55375349	55375470	.	-	0	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 1885 2006 +
Chr2	stalkie_big_nohaplotig	CDS	55375624	55375872	.	-	0	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 1636 1884 +
Chr2	stalkie_big_nohaplotig	CDS	55375945	55376041	.	-	1	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 1539 1635 +
Chr2	stalkie_big_nohaplotig	CDS	55377450	55377577	.	-	0	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 1411 1538 +
Chr2	stalkie_big_nohaplotig	CDS	55377682	55377752	.	-	2	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 1340 1410 +
Chr2	stalkie_big_nohaplotig	CDS	55386789	55386976	.	-	1	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 1152 1339 +
Chr2	stalkie_big_nohaplotig	CDS	55395937	55395981	.	-	1	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 1107 1151 +
Chr2	stalkie_big_nohaplotig	CDS	55403492	55403679	.	-	0	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 919 1106 +
Chr2	stalkie_big_nohaplotig	CDS	55403743	55403853	.	-	0	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 808 918 +
Chr2	stalkie_big_nohaplotig	CDS	55403932	55404057	.	-	0	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 682 807 +
Chr2	stalkie_big_nohaplotig	CDS	55404766	55404941	.	-	2	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 506 681 +
Chr2	stalkie_big_nohaplotig	CDS	55405032	55405114	.	-	1	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 423 505 +
Chr2	stalkie_big_nohaplotig	CDS	55410199	55410333	.	-	1	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 288 422 +
Chr2	stalkie_big_nohaplotig	CDS	55415081	55415265	.	-	0	Parent=FBgn0033494.1.mrna1;Target=FBgn0033494.1 103 287 +
Chr2	gffcl	locus	55396420	55397446	.	-	.	ID=RLOC_00017495;geneIDs=comp152707_c0_seq1.path1;transcripts=comp152707_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55396420	55397446	.	-	.	ID=comp152707_c0_seq1.mrna1;geneID=comp152707_c0_seq1.path1;Name=comp152707_c0_seq1;Dir=sensecoverage=100.0;identity=92.1;matches=731;mismatches=47;indels=16;unknowns=0;Target=comp152707_c0_seq1 49 120 +;locus=RLOC_00017495
Chr2	stalkie_big_nohaplotig	exon	55396420	55397038	90	-	.	Parent=comp152707_c0_seq1.mrna1;Target=comp152707_c0_seq1 175 779 +
Chr2	stalkie_big_nohaplotig	exon	55397273	55397446	97	-	.	Parent=comp152707_c0_seq1.mrna1;Target=comp152707_c0_seq1 1 174 +
Chr2	stalkie_big_nohaplotig	CDS	55397327	55397398	.	-	0	Parent=comp152707_c0_seq1.mrna1
Chr2	gffcl	locus	55490691	55492295	.	-	.	ID=RLOC_00017496;geneIDs=FBgn0033495.1.path1;transcripts=FBgn0033495.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55490691	55492295	.	-	.	ID=FBgn0033495.1.mrna1;geneID=FBgn0033495.1.path1;Name=FBgn0033495.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1599;mismatches=6;indels=6;unknowns=0;Target=FBgn0033495.1 1611 1 .;locus=RLOC_00017496
Chr2	stalkie_big_nohaplotig	exon	55490691	55492295	99	-	.	Parent=FBgn0033495.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55490691	55492295	.	-	0	Parent=FBgn0033495.1.mrna1
Chr2	gffcl	locus	55570952	55576611	.	-	.	ID=RLOC_00017497;geneIDs=comp139751_c0_seq1.path1;transcripts=comp139751_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55570952	55576611	.	-	.	ID=comp139751_c0_seq1.mrna1;geneID=comp139751_c0_seq1.path1;Name=comp139751_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=524;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017497
Chr2	stalkie_big_nohaplotig	exon	55570952	55571291	99	-	.	Parent=comp139751_c0_seq1.mrna1;Target=comp139751_c0_seq1 1 340 -
Chr2	stalkie_big_nohaplotig	exon	55571359	55571432	100	-	.	Parent=comp139751_c0_seq1.mrna1;Target=comp139751_c0_seq1 341 414 -
Chr2	stalkie_big_nohaplotig	exon	55576501	55576611	100	-	.	Parent=comp139751_c0_seq1.mrna1;Target=comp139751_c0_seq1 415 525 -
Chr2	stalkie_big_nohaplotig	CDS	55571093	55571291	.	-	1	Parent=comp139751_c0_seq1.mrna1;Target=comp139751_c0_seq1 142 340 .
Chr2	stalkie_big_nohaplotig	CDS	55571359	55571432	.	-	0	Parent=comp139751_c0_seq1.mrna1;Target=comp139751_c0_seq1 341 414 .
Chr2	stalkie_big_nohaplotig	CDS	55576501	55576611	.	-	0	Parent=comp139751_c0_seq1.mrna1;Target=comp139751_c0_seq1 415 525 .
Chr2	gffcl	locus	55597031	55597535	.	-	.	ID=RLOC_00017498;geneIDs=comp147131_c0_seq1.path1;transcripts=comp147131_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55597031	55597535	.	-	.	ID=comp147131_c0_seq1.mrna1;geneID=comp147131_c0_seq1.path1;Name=comp147131_c0_seq1;Dir=indeterminatecoverage=93.2;identity=100.0;matches=505;mismatches=0;indels=0;unknowns=0;Target=comp147131_c0_seq1 525 21 .;CDS_Target=comp147131_c0_seq1 92 33 .;locus=RLOC_00017498
Chr2	stalkie_big_nohaplotig	exon	55597031	55597535	100	-	.	Parent=comp147131_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55597464	55597523	.	-	0	Parent=comp147131_c0_seq1.mrna1
Chr2	gffcl	locus	55598372	55598742	.	-	.	ID=RLOC_00017499;geneIDs=comp146977_c0_seq1.path1;transcripts=comp146977_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55598372	55598742	.	-	.	ID=comp146977_c0_seq1.mrna1;geneID=comp146977_c0_seq1.path1;Name=comp146977_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.2;matches=370;mismatches=1;indels=2;unknowns=0;Target=comp146977_c0_seq1 373 1 .;CDS_Target=comp146977_c0_seq1 216 103 .;locus=RLOC_00017499
Chr2	stalkie_big_nohaplotig	exon	55598372	55598742	99	-	.	Parent=comp146977_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55598527	55598640	.	-	0	Parent=comp146977_c0_seq1.mrna1
Chr2	gffcl	locus	55600246	55601272	.	-	.	ID=RLOC_00017500;geneIDs=comp158652_c0_seq1.path1;transcripts=comp158652_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55600246	55601272	.	-	.	ID=comp158652_c0_seq1.mrna1;geneID=comp158652_c0_seq1.path1;Name=comp158652_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1024;mismatches=3;indels=0;unknowns=0;Target=comp158652_c0_seq1 1027 1 .;CDS_Target=comp158652_c0_seq1 187 2 .;locus=RLOC_00017500
Chr2	stalkie_big_nohaplotig	exon	55600246	55601272	99	-	.	Parent=comp158652_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55601086	55601271	.	-	0	Parent=comp158652_c0_seq1.mrna1
Chr2	gffcl	locus	55601596	55602094	.	+	.	ID=RLOC_00017501;geneIDs=comp156519_c0_seq1.path1;transcripts=comp156519_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55601596	55602094	.	+	.	ID=comp156519_c0_seq1.mrna1;geneID=comp156519_c0_seq1.path1;Name=comp156519_c0_seq1;Dir=indeterminatecoverage=99.6;identity=96.9;matches=493;mismatches=6;indels=10;unknowns=0;Target=comp156519_c0_seq1 511 3 .;CDS_Target=comp156519_c0_seq1 451 371 .;locus=RLOC_00017501
Chr2	stalkie_big_nohaplotig	exon	55601596	55602094	96	+	.	Parent=comp156519_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55601954	55602034	.	+	0	Parent=comp156519_c0_seq1.mrna1
Chr2	gffcl	locus	55604325	55604824	.	+	.	ID=RLOC_00017502;geneIDs=comp566439_c0_seq1.path1;transcripts=comp566439_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55604325	55604824	.	+	.	ID=comp566439_c0_seq1.mrna1;geneID=comp566439_c0_seq1.path1;Name=comp566439_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=500;mismatches=0;indels=4;unknowns=0;Target=comp566439_c0_seq1 504 1 .;CDS_Target=comp566439_c0_seq1 236 150 .;locus=RLOC_00017502
Chr2	stalkie_big_nohaplotig	exon	55604325	55604824	99	+	.	Parent=comp566439_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55604474	55604556	.	+	0	Parent=comp566439_c0_seq1.mrna1
Chr2	gffcl	locus	55605152	55670144	.	-	.	ID=RLOC_00017503;geneIDs=FBgn0000448.1.path1;transcripts=FBgn0000448.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55605152	55670144	.	-	.	ID=FBgn0000448.1.mrna1;geneID=FBgn0000448.1.path1;Name=FBgn0000448.1;Dir=sensecoverage=100.0;identity=99.9;matches=1631;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017503
Chr2	stalkie_big_nohaplotig	exon	55605152	55605269	100	-	.	Parent=FBgn0000448.1.mrna1;Target=FBgn0000448.1 1515 1632 +
Chr2	stalkie_big_nohaplotig	exon	55605343	55605493	99	-	.	Parent=FBgn0000448.1.mrna1;Target=FBgn0000448.1 1364 1514 +
Chr2	stalkie_big_nohaplotig	exon	55605621	55605864	100	-	.	Parent=FBgn0000448.1.mrna1;Target=FBgn0000448.1 1120 1363 +
Chr2	stalkie_big_nohaplotig	exon	55606072	55606218	100	-	.	Parent=FBgn0000448.1.mrna1;Target=FBgn0000448.1 973 1119 +
Chr2	stalkie_big_nohaplotig	exon	55607747	55607850	100	-	.	Parent=FBgn0000448.1.mrna1;Target=FBgn0000448.1 869 972 +
Chr2	stalkie_big_nohaplotig	exon	55609947	55610110	100	-	.	Parent=FBgn0000448.1.mrna1;Target=FBgn0000448.1 705 868 +
Chr2	stalkie_big_nohaplotig	exon	55610185	55610350	100	-	.	Parent=FBgn0000448.1.mrna1;Target=FBgn0000448.1 539 704 +
Chr2	stalkie_big_nohaplotig	exon	55611900	55612127	100	-	.	Parent=FBgn0000448.1.mrna1;Target=FBgn0000448.1 311 538 +
Chr2	stalkie_big_nohaplotig	exon	55669835	55670144	100	-	.	Parent=FBgn0000448.1.mrna1;Target=FBgn0000448.1 1 310 +
Chr2	stalkie_big_nohaplotig	CDS	55605152	55605269	.	-	1	Parent=FBgn0000448.1.mrna1;Target=FBgn0000448.1 1515 1632 +
Chr2	stalkie_big_nohaplotig	CDS	55605343	55605493	.	-	2	Parent=FBgn0000448.1.mrna1;Target=FBgn0000448.1 1364 1514 +
Chr2	stalkie_big_nohaplotig	CDS	55605621	55605864	.	-	0	Parent=FBgn0000448.1.mrna1;Target=FBgn0000448.1 1120 1363 +
Chr2	stalkie_big_nohaplotig	CDS	55606072	55606218	.	-	0	Parent=FBgn0000448.1.mrna1;Target=FBgn0000448.1 973 1119 +
Chr2	stalkie_big_nohaplotig	CDS	55607747	55607850	.	-	2	Parent=FBgn0000448.1.mrna1;Target=FBgn0000448.1 869 972 +
Chr2	stalkie_big_nohaplotig	CDS	55609947	55610110	.	-	1	Parent=FBgn0000448.1.mrna1;Target=FBgn0000448.1 705 868 +
Chr2	stalkie_big_nohaplotig	CDS	55610185	55610350	.	-	2	Parent=FBgn0000448.1.mrna1;Target=FBgn0000448.1 539 704 +
Chr2	stalkie_big_nohaplotig	CDS	55611900	55612127	.	-	2	Parent=FBgn0000448.1.mrna1;Target=FBgn0000448.1 311 538 +
Chr2	stalkie_big_nohaplotig	CDS	55669835	55670144	.	-	0	Parent=FBgn0000448.1.mrna1;Target=FBgn0000448.1 1 310 +
Chr2	gffcl	locus	55647674	55650410	.	-	.	ID=RLOC_00017504;geneIDs=comp137225_c0_seq1.path1;transcripts=comp137225_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55647674	55650410	.	-	.	ID=comp137225_c0_seq1.mrna1;geneID=comp137225_c0_seq1.path1;Name=comp137225_c0_seq1;Dir=sensecoverage=97.9;identity=99.8;matches=657;mismatches=1;indels=0;unknowns=0;Target=comp137225_c0_seq1 532 672 +;locus=RLOC_00017504
Chr2	stalkie_big_nohaplotig	exon	55647674	55648274	99	-	.	Parent=comp137225_c0_seq1.mrna1;Target=comp137225_c0_seq1 72 672 +
Chr2	stalkie_big_nohaplotig	exon	55650354	55650410	100	-	.	Parent=comp137225_c0_seq1.mrna1;Target=comp137225_c0_seq1 15 71 +
Chr2	stalkie_big_nohaplotig	CDS	55647674	55647814	.	-	0	Parent=comp137225_c0_seq1.mrna1
Chr2	gffcl	locus	55653663	55653966	.	+	.	ID=RLOC_00017505;geneIDs=comp1310309_c0_seq1.path1;transcripts=comp1310309_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55653663	55653966	.	+	.	ID=comp1310309_c0_seq1.mrna1;geneID=comp1310309_c0_seq1.path1;Name=comp1310309_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=303;mismatches=0;indels=1;unknowns=0;Target=comp1310309_c0_seq1 303 1 .;CDS_Target=comp1310309_c0_seq1 77 3 .;locus=RLOC_00017505
Chr2	stalkie_big_nohaplotig	exon	55653663	55653966	99	+	.	Parent=comp1310309_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55653665	55653740	.	+	0	Parent=comp1310309_c0_seq1.mrna1
Chr2	gffcl	locus	55738480	55742860	.	+	.	ID=RLOC_00017507;geneIDs=FBgn0033498.2.path2;transcripts=FBgn0033498.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	55738480	55742860	.	+	.	ID=FBgn0033498.2.mrna2;geneID=FBgn0033498.2.path2;Name=FBgn0033498.2;Dir=sensecoverage=98.9;identity=99.1;matches=858;mismatches=8;indels=0;unknowns=0;locus=RLOC_00017507
Chr2	stalkie_big_nohaplotig	exon	55738480	55738745	98	+	.	Parent=FBgn0033498.2.mrna2;Target=FBgn0033498.2 1 266 +
Chr2	stalkie_big_nohaplotig	exon	55738801	55738945	97	+	.	Parent=FBgn0033498.2.mrna2;Target=FBgn0033498.2 267 411 +
Chr2	stalkie_big_nohaplotig	exon	55739034	55739159	100	+	.	Parent=FBgn0033498.2.mrna2;Target=FBgn0033498.2 412 537 +
Chr2	stalkie_big_nohaplotig	exon	55742475	55742624	99	+	.	Parent=FBgn0033498.2.mrna2;Target=FBgn0033498.2 538 687 +
Chr2	stalkie_big_nohaplotig	exon	55742682	55742860	100	+	.	Parent=FBgn0033498.2.mrna2;Target=FBgn0033498.2 688 866 +
Chr2	stalkie_big_nohaplotig	CDS	55738480	55738745	.	+	0	Parent=FBgn0033498.2.mrna2;Target=FBgn0033498.2 1 266 +
Chr2	stalkie_big_nohaplotig	CDS	55738801	55738945	.	+	1	Parent=FBgn0033498.2.mrna2;Target=FBgn0033498.2 267 411 +
Chr2	stalkie_big_nohaplotig	CDS	55739034	55739159	.	+	0	Parent=FBgn0033498.2.mrna2;Target=FBgn0033498.2 412 537 +
Chr2	stalkie_big_nohaplotig	CDS	55742475	55742624	.	+	0	Parent=FBgn0033498.2.mrna2;Target=FBgn0033498.2 538 687 +
Chr2	stalkie_big_nohaplotig	CDS	55742682	55742858	.	+	0	Parent=FBgn0033498.2.mrna2;Target=FBgn0033498.2 688 864 +
Chr2	gffcl	locus	55750301	55751655	.	+	.	ID=RLOC_00017508;geneIDs=CPIJ000850.1.path1;transcripts=CPIJ000850.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55750301	55751655	.	+	.	ID=CPIJ000850.1.mrna1;geneID=CPIJ000850.1.path1;Name=CPIJ000850.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1351;mismatches=3;indels=1;unknowns=1;Target=CPIJ000850.1 1356 1 .;CDS_Target=CPIJ000850.1 101 3 .;locus=RLOC_00017508
Chr2	stalkie_big_nohaplotig	exon	55750301	55751655	99	+	.	Parent=CPIJ000850.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55750303	55750400	.	+	0	Parent=CPIJ000850.1.mrna1
Chr2	gffcl	locus	55753532	55754978	.	+	.	ID=RLOC_00017509;geneIDs=comp157229_c0_seq1.path1;transcripts=comp157229_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55753532	55754978	.	+	.	ID=comp157229_c0_seq1.mrna1;geneID=comp157229_c0_seq1.path1;Name=comp157229_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=1288;mismatches=12;indels=2;unknowns=0;locus=RLOC_00017509
Chr2	stalkie_big_nohaplotig	exon	55753532	55753564	100	+	.	Parent=comp157229_c0_seq1.mrna1;Target=comp157229_c0_seq1 1270 1302 -
Chr2	stalkie_big_nohaplotig	exon	55753639	55754034	100	+	.	Parent=comp157229_c0_seq1.mrna1;Target=comp157229_c0_seq1 874 1269 -
Chr2	stalkie_big_nohaplotig	exon	55754108	55754978	98	+	.	Parent=comp157229_c0_seq1.mrna1;Target=comp157229_c0_seq1 1 873 -
Chr2	stalkie_big_nohaplotig	CDS	55753930	55754034	.	+	0	Parent=comp157229_c0_seq1.mrna1;Target=comp157229_c0_seq1 874 978 .
Chr2	stalkie_big_nohaplotig	CDS	55754108	55754125	.	+	0	Parent=comp157229_c0_seq1.mrna1;Target=comp157229_c0_seq1 856 873 .
Chr2	gffcl	locus	55756584	55760693	.	-	.	ID=RLOC_00017510;geneIDs=FBgn0033498.2.path1;transcripts=FBgn0033498.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55756584	55760693	.	-	.	ID=FBgn0033498.2.mrna1;geneID=FBgn0033498.2.path1;Name=FBgn0033498.2;Dir=sensecoverage=97.0;identity=99.5;matches=846;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017510
Chr2	stalkie_big_nohaplotig	exon	55756584	55756762	99	-	.	Parent=FBgn0033498.2.mrna1;Target=FBgn0033498.2 688 866 +
Chr2	stalkie_big_nohaplotig	exon	55756820	55756969	100	-	.	Parent=FBgn0033498.2.mrna1;Target=FBgn0033498.2 538 687 +
Chr2	stalkie_big_nohaplotig	exon	55760030	55760155	100	-	.	Parent=FBgn0033498.2.mrna1;Target=FBgn0033498.2 412 537 +
Chr2	stalkie_big_nohaplotig	exon	55760244	55760388	100	-	.	Parent=FBgn0033498.2.mrna1;Target=FBgn0033498.2 267 411 +
Chr2	stalkie_big_nohaplotig	exon	55760444	55760693	98	-	.	Parent=FBgn0033498.2.mrna1;Target=FBgn0033498.2 17 266 +
Chr2	stalkie_big_nohaplotig	CDS	55756586	55756762	.	-	0	Parent=FBgn0033498.2.mrna1;Target=FBgn0033498.2 688 864 +
Chr2	stalkie_big_nohaplotig	CDS	55756820	55756969	.	-	0	Parent=FBgn0033498.2.mrna1;Target=FBgn0033498.2 538 687 +
Chr2	stalkie_big_nohaplotig	CDS	55760030	55760155	.	-	0	Parent=FBgn0033498.2.mrna1;Target=FBgn0033498.2 412 537 +
Chr2	stalkie_big_nohaplotig	CDS	55760244	55760388	.	-	1	Parent=FBgn0033498.2.mrna1;Target=FBgn0033498.2 267 411 +
Chr2	stalkie_big_nohaplotig	CDS	55760444	55760691	.	-	0	Parent=FBgn0033498.2.mrna1;Target=FBgn0033498.2 19 266 +
Chr2	gffcl	locus	55780760	57433180	.	+	.	ID=RLOC_00017511;geneIDs=comp160344_c6_seq1.path1;transcripts=comp160344_c6_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55780760	57433180	.	+	.	ID=comp160344_c6_seq1.mrna1;geneID=comp160344_c6_seq1.path1;Name=comp160344_c6_seq1;Dir=indeterminatecoverage=74.5;identity=99.8;matches=3579;mismatches=4;indels=3;unknowns=0;Target=comp160344_c6_seq1 1689 1324 .;locus=RLOC_00017511
Chr2	stalkie_big_nohaplotig	exon	55780760	55784299	99	+	.	Parent=comp160344_c6_seq1.mrna1;Target=comp160344_c6_seq1 3543 1 .
Chr2	stalkie_big_nohaplotig	exon	56967482	56967493	100	+	.	Parent=comp160344_c6_seq1.mrna1;Target=comp160344_c6_seq1 3555 3544 .
Chr2	stalkie_big_nohaplotig	exon	56974813	56974821	100	+	.	Parent=comp160344_c6_seq1.mrna1;Target=comp160344_c6_seq1 3567 3559 .
Chr2	stalkie_big_nohaplotig	exon	56974835	56974837	100	+	.	Parent=comp160344_c6_seq1.mrna1;Target=comp160344_c6_seq1 3621 3619 .
Chr2	stalkie_big_nohaplotig	exon	56979790	56979802	100	+	.	Parent=comp160344_c6_seq1.mrna1;Target=comp160344_c6_seq1 3634 3622 .
Chr2	stalkie_big_nohaplotig	exon	57433176	57433180	100	+	.	Parent=comp160344_c6_seq1.mrna1;Target=comp160344_c6_seq1 4094 4090 .
Chr2	stalkie_big_nohaplotig	CDS	55782083	55782448	.	+	0	Parent=comp160344_c6_seq1.mrna1
Chr2	gffcl	locus	55780762	57457304	.	.	.	ID=RLOC_00017512;geneIDs=FBgn0033504.2.path1,FBgn0053558.1.path1;transcripts=FBgn0053558.1.mrna1,FBgn0033504.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55780762	57457304	.	-	.	ID=FBgn0053558.1.mrna1;geneID=FBgn0053558.1.path1;Name=FBgn0053558.1;Dir=indeterminatecoverage=83.1;identity=99.9;matches=3676;mismatches=3;indels=0;unknowns=0;Target=FBgn0053558.1 4986 1912 .;locus=RLOC_00017512
Chr2	stalkie_big_nohaplotig	exon	55780762	55784298	99	-	.	Parent=FBgn0053558.1.mrna1;Target=FBgn0053558.1 4986 1450 .
Chr2	stalkie_big_nohaplotig	exon	55805586	55805588	100	-	.	Parent=FBgn0053558.1.mrna1;Target=FBgn0053558.1 1449 1447 .
Chr2	stalkie_big_nohaplotig	exon	55815179	55815185	100	-	.	Parent=FBgn0053558.1.mrna1;Target=FBgn0053558.1 1446 1440 .
Chr2	stalkie_big_nohaplotig	exon	55815975	55815977	100	-	.	Parent=FBgn0053558.1.mrna1;Target=FBgn0053558.1 1439 1437 .
Chr2	stalkie_big_nohaplotig	exon	55816012	55816022	100	-	.	Parent=FBgn0053558.1.mrna1;Target=FBgn0053558.1 1396 1386 .
Chr2	stalkie_big_nohaplotig	exon	55827764	55827773	100	-	.	Parent=FBgn0053558.1.mrna1;Target=FBgn0053558.1 1381 1372 .
Chr2	stalkie_big_nohaplotig	exon	55841127	55841133	100	-	.	Parent=FBgn0053558.1.mrna1;Target=FBgn0053558.1 1371 1365 .
Chr2	stalkie_big_nohaplotig	exon	55849090	55849093	100	-	.	Parent=FBgn0053558.1.mrna1;Target=FBgn0053558.1 1364 1361 .
Chr2	stalkie_big_nohaplotig	exon	55864567	55864571	100	-	.	Parent=FBgn0053558.1.mrna1;Target=FBgn0053558.1 1360 1356 .
Chr2	stalkie_big_nohaplotig	exon	55871757	55871759	100	-	.	Parent=FBgn0053558.1.mrna1;Target=FBgn0053558.1 1355 1353 .
Chr2	stalkie_big_nohaplotig	exon	55877979	55877987	100	-	.	Parent=FBgn0053558.1.mrna1;Target=FBgn0053558.1 1352 1344 .
Chr2	stalkie_big_nohaplotig	exon	55878027	55878035	100	-	.	Parent=FBgn0053558.1.mrna1;Target=FBgn0053558.1 1292 1284 .
Chr2	stalkie_big_nohaplotig	exon	55893926	55893934	100	-	.	Parent=FBgn0053558.1.mrna1;Target=FBgn0053558.1 1282 1274 .
Chr2	stalkie_big_nohaplotig	exon	55893981	55893988	100	-	.	Parent=FBgn0053558.1.mrna1;Target=FBgn0053558.1 1221 1214 .
Chr2	stalkie_big_nohaplotig	exon	55909867	55909875	100	-	.	Parent=FBgn0053558.1.mrna1;Target=FBgn0053558.1 1213 1205 .
Chr2	stalkie_big_nohaplotig	exon	55911100	55911104	100	-	.	Parent=FBgn0053558.1.mrna1;Target=FBgn0053558.1 1204 1200 .
Chr2	stalkie_big_nohaplotig	exon	55920773	55920780	100	-	.	Parent=FBgn0053558.1.mrna1;Target=FBgn0053558.1 1199 1192 .
Chr2	stalkie_big_nohaplotig	exon	57450529	57450539	100	-	.	Parent=FBgn0053558.1.mrna1;Target=FBgn0053558.1 881 871 .
Chr2	stalkie_big_nohaplotig	exon	57457214	57457216	100	-	.	Parent=FBgn0053558.1.mrna1;Target=FBgn0053558.1 870 868 .
Chr2	stalkie_big_nohaplotig	exon	57457288	57457304	100	-	.	Parent=FBgn0053558.1.mrna1;Target=FBgn0053558.1 858 842 .
Chr2	stalkie_big_nohaplotig	CDS	55780762	55783836	.	-	0	Parent=FBgn0053558.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55919559	55922943	.	+	.	ID=FBgn0033504.2.mrna1;geneID=FBgn0033504.2.path1;Name=FBgn0033504.2;Dir=indeterminatecoverage=99.5;identity=99.1;matches=3354;mismatches=31;indels=0;unknowns=0;Target=FBgn0033504.2 3385 1 .;CDS_Target=FBgn0033504.2 3384 1 .;locus=RLOC_00017512
Chr2	stalkie_big_nohaplotig	exon	55919559	55922943	99	+	.	Parent=FBgn0033504.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55919559	55922942	.	+	0	Parent=FBgn0033504.2.mrna1
Chr2	gffcl	locus	55806535	55806860	.	-	.	ID=RLOC_00017513;geneIDs=comp146565_c0_seq1.path1;transcripts=comp146565_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55806535	55806860	.	-	.	ID=comp146565_c0_seq1.mrna1;geneID=comp146565_c0_seq1.path1;Name=comp146565_c0_seq1;Dir=indeterminatecoverage=93.1;identity=99.7;matches=325;mismatches=1;indels=0;unknowns=0;Target=comp146565_c0_seq1 326 1 .;CDS_Target=comp146565_c0_seq1 148 77 .;locus=RLOC_00017513
Chr2	stalkie_big_nohaplotig	exon	55806535	55806860	99	-	.	Parent=comp146565_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55806713	55806784	.	-	0	Parent=comp146565_c0_seq1.mrna1
Chr2	gffcl	locus	55819041	55820768	.	-	.	ID=RLOC_00017514;geneIDs=ORF1226.path1;transcripts=ORF1226.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55819041	55820768	.	-	.	ID=ORF1226.mrna1;geneID=ORF1226.path1;Name=ORF1226;Dir=sensecoverage=46.2;identity=99.3;matches=539;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017514
Chr2	stalkie_big_nohaplotig	exon	55819041	55819245	98	-	.	Parent=ORF1226.mrna1;Target=ORF1226 972 1176 +
Chr2	stalkie_big_nohaplotig	exon	55820431	55820768	99	-	.	Parent=ORF1226.mrna1;Target=ORF1226 634 971 +
Chr2	stalkie_big_nohaplotig	CDS	55819041	55819245	.	-	1	Parent=ORF1226.mrna1;Target=ORF1226 972 1176 +
Chr2	stalkie_big_nohaplotig	CDS	55820431	55820768	.	-	0	Parent=ORF1226.mrna1;Target=ORF1226 634 971 +
Chr2	gffcl	locus	55828868	55832327	.	-	.	ID=RLOC_00017515;geneIDs=FBgn0033500.1.path1,comp152941_c0_seq1.path1;transcripts=FBgn0033500.1.mrna1,comp152941_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55828868	55832327	.	-	.	ID=FBgn0033500.1.mrna1;geneID=FBgn0033500.1.path1;Name=FBgn0033500.1;Dir=sensecoverage=100.0;identity=98.5;matches=1746;mismatches=27;indels=0;unknowns=0;locus=RLOC_00017515
Chr2	stalkie_big_nohaplotig	exon	55828868	55829020	97	-	.	Parent=FBgn0033500.1.mrna1;Target=FBgn0033500.1 1621 1773 +
Chr2	stalkie_big_nohaplotig	exon	55829084	55829231	98	-	.	Parent=FBgn0033500.1.mrna1;Target=FBgn0033500.1 1473 1620 +
Chr2	stalkie_big_nohaplotig	exon	55829294	55829445	100	-	.	Parent=FBgn0033500.1.mrna1;Target=FBgn0033500.1 1321 1472 +
Chr2	stalkie_big_nohaplotig	exon	55830874	55831895	98	-	.	Parent=FBgn0033500.1.mrna1;Target=FBgn0033500.1 299 1320 +
Chr2	stalkie_big_nohaplotig	exon	55831966	55832136	100	-	.	Parent=FBgn0033500.1.mrna1;Target=FBgn0033500.1 128 298 +
Chr2	stalkie_big_nohaplotig	exon	55832201	55832327	98	-	.	Parent=FBgn0033500.1.mrna1;Target=FBgn0033500.1 1 127 +
Chr2	stalkie_big_nohaplotig	CDS	55828868	55829020	.	-	0	Parent=FBgn0033500.1.mrna1;Target=FBgn0033500.1 1621 1773 +
Chr2	stalkie_big_nohaplotig	CDS	55829084	55829231	.	-	1	Parent=FBgn0033500.1.mrna1;Target=FBgn0033500.1 1473 1620 +
Chr2	stalkie_big_nohaplotig	CDS	55829294	55829445	.	-	0	Parent=FBgn0033500.1.mrna1;Target=FBgn0033500.1 1321 1472 +
Chr2	stalkie_big_nohaplotig	CDS	55830874	55831895	.	-	2	Parent=FBgn0033500.1.mrna1;Target=FBgn0033500.1 299 1320 +
Chr2	stalkie_big_nohaplotig	CDS	55831966	55832136	.	-	2	Parent=FBgn0033500.1.mrna1;Target=FBgn0033500.1 128 298 +
Chr2	stalkie_big_nohaplotig	CDS	55832201	55832327	.	-	0	Parent=FBgn0033500.1.mrna1;Target=FBgn0033500.1 1 127 +
Chr2	stalkie_big_nohaplotig	mRNA	55829057	55829107	.	-	.	ID=comp152941_c0_seq1.mrna1;geneID=comp152941_c0_seq1.path1;Name=comp152941_c0_seq1;Dir=indeterminatecoverage=4.2;identity=100.0;matches=51;mismatches=0;indels=0;unknowns=0;Target=comp152941_c0_seq1 51 1 .;CDS_Target=comp152941_c0_seq1 51 2 .;locus=RLOC_00017515
Chr2	stalkie_big_nohaplotig	exon	55829057	55829107	100	-	.	Parent=comp152941_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55829057	55829106	.	-	0	Parent=comp152941_c0_seq1.mrna1
Chr2	gffcl	locus	55835741	55840032	.	+	.	ID=RLOC_00017516;geneIDs=FBgn0003660.1.path1,comp117620_c0_seq1.path1;transcripts=FBgn0003660.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55836176	55840032	.	+	.	ID=FBgn0003660.1.mrna1;geneID=FBgn0003660.1.path1;Name=FBgn0003660.1;Dir=sensecoverage=100.0;identity=99.3;matches=405;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017516
Chr2	stalkie_big_nohaplotig	exon	55836176	55836252	100	+	.	Parent=FBgn0003660.1.mrna1;Target=FBgn0003660.1 1 77 +
Chr2	stalkie_big_nohaplotig	exon	55836529	55836845	99	+	.	Parent=FBgn0003660.1.mrna1;Target=FBgn0003660.1 78 394 +
Chr2	stalkie_big_nohaplotig	exon	55840019	55840032	100	+	.	Parent=FBgn0003660.1.mrna1;Target=FBgn0003660.1 395 408 +
Chr2	stalkie_big_nohaplotig	CDS	55836176	55836252	.	+	0	Parent=FBgn0003660.1.mrna1;Target=FBgn0003660.1 1 77 +
Chr2	stalkie_big_nohaplotig	CDS	55836529	55836845	.	+	1	Parent=FBgn0003660.1.mrna1;Target=FBgn0003660.1 78 394 +
Chr2	stalkie_big_nohaplotig	CDS	55840019	55840032	.	+	2	Parent=FBgn0003660.1.mrna1;Target=FBgn0003660.1 395 408 +
Chr2	gffcl	locus	55837722	55839596	.	+	.	ID=RLOC_00017517;geneIDs=comp161424_c0_seq1.path1;transcripts=comp161424_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55837722	55839596	.	+	.	ID=comp161424_c0_seq1.mrna1;geneID=comp161424_c0_seq1.path1;Name=comp161424_c0_seq1;Dir=indeterminatecoverage=76.0;identity=88.1;matches=1613;mismatches=130;indels=88;unknowns=0;Target=comp161424_c0_seq1 781 716 .;locus=RLOC_00017517
Chr2	stalkie_big_nohaplotig	exon	55837722	55838557	88	+	.	Parent=comp161424_c0_seq1.mrna1;Target=comp161424_c0_seq1 1414 577 .
Chr2	stalkie_big_nohaplotig	exon	55838669	55839596	87	+	.	Parent=comp161424_c0_seq1.mrna1;Target=comp161424_c0_seq1 2480 1509 .
Chr2	stalkie_big_nohaplotig	CDS	55837861	55837926	.	+	0	Parent=comp161424_c0_seq1.mrna1
Chr2	gffcl	locus	55843723	55844261	.	+	.	ID=RLOC_00017518;geneIDs=comp147622_c0_seq1.path1;transcripts=comp147622_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55843723	55844261	.	+	.	ID=comp147622_c0_seq1.mrna1;geneID=comp147622_c0_seq1.path1;Name=comp147622_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=535;mismatches=4;indels=0;unknowns=0;Target=comp147622_c0_seq1 539 1 .;CDS_Target=comp147622_c0_seq1 415 266 .;locus=RLOC_00017518
Chr2	stalkie_big_nohaplotig	exon	55843723	55844261	99	+	.	Parent=comp147622_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55843988	55844137	.	+	0	Parent=comp147622_c0_seq1.mrna1
Chr2	gffcl	locus	55856912	55857855	.	+	.	ID=RLOC_00017519;geneIDs=comp151192_c0_seq1.path1;transcripts=comp151192_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55856912	55857855	.	+	.	ID=comp151192_c0_seq1.mrna1;geneID=comp151192_c0_seq1.path1;Name=comp151192_c0_seq1;Dir=sensecoverage=87.0;identity=96.8;matches=568;mismatches=17;indels=2;unknowns=0;Target=comp151192_c0_seq1 264 392 +;locus=RLOC_00017519
Chr2	stalkie_big_nohaplotig	exon	55856912	55857040	92	+	.	Parent=comp151192_c0_seq1.mrna1;Target=comp151192_c0_seq1 1 130 +
Chr2	stalkie_big_nohaplotig	exon	55857400	55857855	98	+	.	Parent=comp151192_c0_seq1.mrna1;Target=comp151192_c0_seq1 131 587 +
Chr2	stalkie_big_nohaplotig	CDS	55857533	55857661	.	+	0	Parent=comp151192_c0_seq1.mrna1
Chr2	gffcl	locus	55863829	55946110	.	+	.	ID=RLOC_00017520;geneIDs=FBgn0033504.1.path1;transcripts=FBgn0033504.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55863829	55946110	.	+	.	ID=FBgn0033504.1.mrna1;geneID=FBgn0033504.1.path1;Name=FBgn0033504.1;Dir=sensecoverage=100.0;identity=99.8;matches=2578;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017520
Chr2	stalkie_big_nohaplotig	exon	55863829	55863907	100	+	.	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 1 79 +
Chr2	stalkie_big_nohaplotig	exon	55864277	55864339	100	+	.	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 80 142 +
Chr2	stalkie_big_nohaplotig	exon	55879542	55879976	100	+	.	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 143 577 +
Chr2	stalkie_big_nohaplotig	exon	55880106	55880201	100	+	.	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 578 673 +
Chr2	stalkie_big_nohaplotig	exon	55880635	55880642	100	+	.	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 674 681 +
Chr2	stalkie_big_nohaplotig	exon	55893125	55893130	100	+	.	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 682 687 +
Chr2	stalkie_big_nohaplotig	exon	55904945	55905070	100	+	.	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 688 813 +
Chr2	stalkie_big_nohaplotig	exon	55905166	55905238	100	+	.	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 814 886 +
Chr2	stalkie_big_nohaplotig	exon	55908610	55908642	100	+	.	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 887 919 +
Chr2	stalkie_big_nohaplotig	exon	55909334	55909496	100	+	.	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 920 1082 +
Chr2	stalkie_big_nohaplotig	exon	55909565	55909685	100	+	.	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 1083 1203 +
Chr2	stalkie_big_nohaplotig	exon	55912199	55912231	100	+	.	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 1204 1236 +
Chr2	stalkie_big_nohaplotig	exon	55917660	55917712	100	+	.	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 1237 1289 +
Chr2	stalkie_big_nohaplotig	exon	55917768	55917946	98	+	.	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 1290 1468 +
Chr2	stalkie_big_nohaplotig	exon	55923343	55923402	98	+	.	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 1469 1528 +
Chr2	stalkie_big_nohaplotig	exon	55942867	55943206	99	+	.	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 1529 1868 +
Chr2	stalkie_big_nohaplotig	exon	55943270	55943384	100	+	.	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 1869 1983 +
Chr2	stalkie_big_nohaplotig	exon	55945380	55945586	100	+	.	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 1984 2190 +
Chr2	stalkie_big_nohaplotig	exon	55945641	55945867	99	+	.	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 2191 2417 +
Chr2	stalkie_big_nohaplotig	exon	55945945	55946110	100	+	.	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 2418 2583 +
Chr2	stalkie_big_nohaplotig	CDS	55863829	55863907	.	+	0	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	55864277	55864339	.	+	2	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 80 142 +
Chr2	stalkie_big_nohaplotig	CDS	55879542	55879976	.	+	2	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 143 577 +
Chr2	stalkie_big_nohaplotig	CDS	55880106	55880201	.	+	2	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 578 673 +
Chr2	stalkie_big_nohaplotig	CDS	55880635	55880642	.	+	2	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 674 681 +
Chr2	stalkie_big_nohaplotig	CDS	55893125	55893130	.	+	0	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 682 687 +
Chr2	stalkie_big_nohaplotig	CDS	55904945	55905070	.	+	0	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 688 813 +
Chr2	stalkie_big_nohaplotig	CDS	55905166	55905238	.	+	0	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 814 886 +
Chr2	stalkie_big_nohaplotig	CDS	55908610	55908642	.	+	2	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 887 919 +
Chr2	stalkie_big_nohaplotig	CDS	55909334	55909496	.	+	2	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 920 1082 +
Chr2	stalkie_big_nohaplotig	CDS	55909565	55909685	.	+	1	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 1083 1203 +
Chr2	stalkie_big_nohaplotig	CDS	55912199	55912231	.	+	0	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 1204 1236 +
Chr2	stalkie_big_nohaplotig	CDS	55917660	55917712	.	+	0	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 1237 1289 +
Chr2	stalkie_big_nohaplotig	CDS	55917768	55917946	.	+	1	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 1290 1468 +
Chr2	stalkie_big_nohaplotig	CDS	55923343	55923402	.	+	2	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 1469 1528 +
Chr2	stalkie_big_nohaplotig	CDS	55942867	55943206	.	+	2	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 1529 1868 +
Chr2	stalkie_big_nohaplotig	CDS	55943270	55943384	.	+	1	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 1869 1983 +
Chr2	stalkie_big_nohaplotig	CDS	55945380	55945586	.	+	0	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 1984 2190 +
Chr2	stalkie_big_nohaplotig	CDS	55945641	55945867	.	+	0	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 2191 2417 +
Chr2	stalkie_big_nohaplotig	CDS	55945945	55946110	.	+	1	Parent=FBgn0033504.1.mrna1;Target=FBgn0033504.1 2418 2583 +
Chr2	gffcl	locus	55890773	56839113	.	+	.	ID=RLOC_00017521;geneIDs=comp146997_c0_seq1.path1,comp157554_c1_seq1.path1;transcripts=comp146997_c0_seq1.mrna1,comp157554_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55890773	56839113	.	+	.	ID=comp146997_c0_seq1.mrna1;geneID=comp146997_c0_seq1.path1;Name=comp146997_c0_seq1;Dir=indeterminatecoverage=43.0;identity=98.9;matches=543;mismatches=6;indels=0;unknowns=0;Target=comp146997_c0_seq1 181 119 .;locus=RLOC_00017521
Chr2	stalkie_big_nohaplotig	exon	55890773	55891312	98	+	.	Parent=comp146997_c0_seq1.mrna1;Target=comp146997_c0_seq1 540 1 .
Chr2	stalkie_big_nohaplotig	exon	56839105	56839113	100	+	.	Parent=comp146997_c0_seq1.mrna1;Target=comp146997_c0_seq1 549 541 .
Chr2	stalkie_big_nohaplotig	CDS	55890891	55890953	.	+	0	Parent=comp146997_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55891311	55891941	.	+	.	ID=comp157554_c1_seq1.mrna1;geneID=comp157554_c1_seq1.path1;Name=comp157554_c1_seq1;Dir=indeterminatecoverage=44.6;identity=96.0;matches=606;mismatches=22;indels=3;unknowns=0;Target=comp157554_c1_seq1 936 309 .;CDS_Target=comp157554_c1_seq1 688 617 .;locus=RLOC_00017521
Chr2	stalkie_big_nohaplotig	exon	55891311	55891941	96	+	.	Parent=comp157554_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55891619	55891690	.	+	0	Parent=comp157554_c1_seq1.mrna1
Chr2	gffcl	locus	55913730	57857048	.	+	.	ID=RLOC_00017522;geneIDs=comp158243_c0_seq1.path1;transcripts=comp158243_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55913730	57857048	.	+	.	ID=comp158243_c0_seq1.mrna1;geneID=comp158243_c0_seq1.path1;Name=comp158243_c0_seq1;Dir=indeterminatecoverage=90.6;identity=92.8;matches=622;mismatches=14;indels=34;unknowns=0;Target=comp158243_c0_seq1 98 3 .;locus=RLOC_00017522
Chr2	stalkie_big_nohaplotig	exon	55913730	55914355	92	+	.	Parent=comp158243_c0_seq1.mrna1;Target=comp158243_c0_seq1 634 1 .
Chr2	stalkie_big_nohaplotig	exon	57851169	57851173	100	+	.	Parent=comp158243_c0_seq1.mrna1;Target=comp158243_c0_seq1 639 635 .
Chr2	stalkie_big_nohaplotig	exon	57852501	57852511	100	+	.	Parent=comp158243_c0_seq1.mrna1;Target=comp158243_c0_seq1 650 640 .
Chr2	stalkie_big_nohaplotig	exon	57857042	57857048	100	+	.	Parent=comp158243_c0_seq1.mrna1;Target=comp158243_c0_seq1 657 651 .
Chr2	stalkie_big_nohaplotig	CDS	55913732	55913827	.	+	0	Parent=comp158243_c0_seq1.mrna1
Chr2	gffcl	locus	55941502	55942390	.	+	.	ID=RLOC_00017523;geneIDs=comp153312_c0_seq1.path1;transcripts=comp153312_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55941502	55942390	.	+	.	ID=comp153312_c0_seq1.mrna1;geneID=comp153312_c0_seq1.path1;Name=comp153312_c0_seq1;Dir=indeterminatecoverage=39.7;identity=95.5;matches=362;mismatches=13;indels=4;unknowns=0;Target=comp153312_c0_seq1 165 100 .;locus=RLOC_00017523
Chr2	stalkie_big_nohaplotig	exon	55941502	55941710	95	+	.	Parent=comp153312_c0_seq1.mrna1;Target=comp153312_c0_seq1 205 1 .
Chr2	stalkie_big_nohaplotig	exon	55942221	55942390	95	+	.	Parent=comp153312_c0_seq1.mrna1;Target=comp153312_c0_seq1 411 242 .
Chr2	stalkie_big_nohaplotig	CDS	55941601	55941670	.	+	0	Parent=comp153312_c0_seq1.mrna1
Chr2	gffcl	locus	55949943	55968955	.	+	.	ID=RLOC_00017524;geneIDs=FBgn0263998.1.path1,comp155420_c0_seq1.path1;transcripts=comp155420_c0_seq1.mrna1,FBgn0263998.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55949943	55951075	.	+	.	ID=comp155420_c0_seq1.mrna1;geneID=comp155420_c0_seq1.path1;Name=comp155420_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1125;mismatches=8;indels=0;unknowns=0;Target=comp155420_c0_seq1 1133 1 .;CDS_Target=comp155420_c0_seq1 367 128 .;locus=RLOC_00017524
Chr2	stalkie_big_nohaplotig	exon	55949943	55951075	99	+	.	Parent=comp155420_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55950070	55950309	.	+	0	Parent=comp155420_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55949948	55968955	.	+	.	ID=FBgn0263998.1.mrna1;geneID=FBgn0263998.1.path1;Name=FBgn0263998.1;Dir=sensecoverage=100.0;identity=99.4;matches=4258;mismatches=20;indels=6;unknowns=0;locus=RLOC_00017524
Chr2	stalkie_big_nohaplotig	exon	55949948	55949966	100	+	.	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 1 19 +
Chr2	stalkie_big_nohaplotig	exon	55955595	55955664	100	+	.	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 20 89 +
Chr2	stalkie_big_nohaplotig	exon	55955720	55956104	99	+	.	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 90 474 +
Chr2	stalkie_big_nohaplotig	exon	55956177	55956478	99	+	.	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 475 776 +
Chr2	stalkie_big_nohaplotig	exon	55956543	55956683	98	+	.	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 777 917 +
Chr2	stalkie_big_nohaplotig	exon	55956742	55956901	99	+	.	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 918 1077 +
Chr2	stalkie_big_nohaplotig	exon	55956964	55957286	99	+	.	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 1078 1400 +
Chr2	stalkie_big_nohaplotig	exon	55958755	55958908	99	+	.	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 1401 1554 +
Chr2	stalkie_big_nohaplotig	exon	55958979	55959760	99	+	.	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 1555 2336 +
Chr2	stalkie_big_nohaplotig	exon	55959826	55960060	99	+	.	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 2337 2571 +
Chr2	stalkie_big_nohaplotig	exon	55967190	55968716	99	+	.	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 2572 4098 +
Chr2	stalkie_big_nohaplotig	exon	55968773	55968955	100	+	.	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 4099 4281 +
Chr2	stalkie_big_nohaplotig	CDS	55949948	55949966	.	+	0	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 1 19 +
Chr2	stalkie_big_nohaplotig	CDS	55955595	55955664	.	+	2	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 20 89 +
Chr2	stalkie_big_nohaplotig	CDS	55955720	55956104	.	+	1	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 90 474 +
Chr2	stalkie_big_nohaplotig	CDS	55956177	55956478	.	+	0	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 475 776 +
Chr2	stalkie_big_nohaplotig	CDS	55956543	55956683	.	+	1	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 777 917 +
Chr2	stalkie_big_nohaplotig	CDS	55956742	55956901	.	+	1	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 918 1077 +
Chr2	stalkie_big_nohaplotig	CDS	55956964	55957286	.	+	0	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 1078 1400 +
Chr2	stalkie_big_nohaplotig	CDS	55958755	55958908	.	+	1	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 1401 1554 +
Chr2	stalkie_big_nohaplotig	CDS	55958979	55959760	.	+	0	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 1555 2336 +
Chr2	stalkie_big_nohaplotig	CDS	55959826	55960060	.	+	1	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 2337 2571 +
Chr2	stalkie_big_nohaplotig	CDS	55967190	55968716	.	+	0	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 2572 4098 +
Chr2	stalkie_big_nohaplotig	CDS	55968773	55968955	.	+	0	Parent=FBgn0263998.1.mrna1;Target=FBgn0263998.1 4099 4281 +
Chr2	gffcl	locus	55964447	56221755	.	-	.	ID=RLOC_00017525;geneIDs=FBgn0033794.1.path1,comp161450_c0_seq1.path1;transcripts=comp161450_c0_seq1.mrna1,FBgn0033794.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55964447	56221755	.	-	.	ID=comp161450_c0_seq1.mrna1;geneID=comp161450_c0_seq1.path1;Name=comp161450_c0_seq1;Dir=indeterminatecoverage=83.3;identity=80.8;matches=559;mismatches=71;indels=62;unknowns=0;locus=RLOC_00017525
Chr2	stalkie_big_nohaplotig	exon	55964447	55964682	97	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 1297 1063 .
Chr2	stalkie_big_nohaplotig	exon	55964767	55964775	100	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 1040 1032 .
Chr2	stalkie_big_nohaplotig	exon	55983445	55983450	100	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 1031 1026 .
Chr2	stalkie_big_nohaplotig	exon	55989582	55989701	52	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 1025 920 .
Chr2	stalkie_big_nohaplotig	exon	56009364	56009378	86	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 919 906 .
Chr2	stalkie_big_nohaplotig	exon	56009533	56009542	80	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 905 896 .
Chr2	stalkie_big_nohaplotig	exon	56012800	56012809	90	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 895 886 .
Chr2	stalkie_big_nohaplotig	exon	56012827	56012834	100	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 831 824 .
Chr2	stalkie_big_nohaplotig	exon	56020707	56020708	50	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 823 822 .
Chr2	stalkie_big_nohaplotig	exon	56023702	56023727	69	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 821 800 .
Chr2	stalkie_big_nohaplotig	exon	56026321	56026329	88	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 799 791 .
Chr2	stalkie_big_nohaplotig	exon	56055405	56055415	83	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 727 716 .
Chr2	stalkie_big_nohaplotig	exon	56061594	56061605	91	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 715 704 .
Chr2	stalkie_big_nohaplotig	exon	56065229	56065238	90	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 703 694 .
Chr2	stalkie_big_nohaplotig	exon	56066490	56066508	78	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 693 676 .
Chr2	stalkie_big_nohaplotig	exon	56080097	56080103	85	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 675 669 .
Chr2	stalkie_big_nohaplotig	exon	56111796	56111802	85	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 668 662 .
Chr2	stalkie_big_nohaplotig	exon	56112276	56112309	57	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 661 636 .
Chr2	stalkie_big_nohaplotig	exon	56126204	56126212	100	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 515 507 .
Chr2	stalkie_big_nohaplotig	exon	56126221	56126228	100	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 491 484 .
Chr2	stalkie_big_nohaplotig	exon	56132024	56132026	100	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 483 481 .
Chr2	stalkie_big_nohaplotig	exon	56135123	56135129	100	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 480 474 .
Chr2	stalkie_big_nohaplotig	exon	56139681	56139683	100	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 473 471 .
Chr2	stalkie_big_nohaplotig	exon	56164174	56164175	100	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 470 469 .
Chr2	stalkie_big_nohaplotig	exon	56177823	56177849	53	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 466 424 .
Chr2	stalkie_big_nohaplotig	exon	56179964	56179971	100	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 423 416 .
Chr2	stalkie_big_nohaplotig	exon	56185432	56185442	100	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 342 332 .
Chr2	stalkie_big_nohaplotig	exon	56190454	56190463	50	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 326 307 .
Chr2	stalkie_big_nohaplotig	exon	56199488	56199499	100	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 275 264 .
Chr2	stalkie_big_nohaplotig	exon	56221748	56221755	100	-	.	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 225 218 .
Chr2	stalkie_big_nohaplotig	CDS	55964620	55964682	.	-	0	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 1125 1063 .
Chr2	stalkie_big_nohaplotig	CDS	55964767	55964775	.	-	0	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 1040 1032 .
Chr2	stalkie_big_nohaplotig	CDS	55983445	55983450	.	-	0	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 1031 1026 .
Chr2	stalkie_big_nohaplotig	CDS	55989582	55989596	.	-	0	Parent=comp161450_c0_seq1.mrna1;Target=comp161450_c0_seq1 1025 1012 .
Chr2	stalkie_big_nohaplotig	mRNA	56020250	56024370	.	-	.	ID=FBgn0033794.1.mrna1;geneID=FBgn0033794.1.path1;Name=FBgn0033794.1;Dir=sensecoverage=100.0;identity=99.5;matches=2623;mismatches=14;indels=0;unknowns=0;locus=RLOC_00017525
Chr2	stalkie_big_nohaplotig	exon	56020250	56020759	99	-	.	Parent=FBgn0033794.1.mrna1;Target=FBgn0033794.1 2128 2637 +
Chr2	stalkie_big_nohaplotig	exon	56020828	56021224	99	-	.	Parent=FBgn0033794.1.mrna1;Target=FBgn0033794.1 1731 2127 +
Chr2	stalkie_big_nohaplotig	exon	56021368	56021600	99	-	.	Parent=FBgn0033794.1.mrna1;Target=FBgn0033794.1 1498 1730 +
Chr2	stalkie_big_nohaplotig	exon	56021760	56022043	98	-	.	Parent=FBgn0033794.1.mrna1;Target=FBgn0033794.1 1214 1497 +
Chr2	stalkie_big_nohaplotig	exon	56023158	56024370	100	-	.	Parent=FBgn0033794.1.mrna1;Target=FBgn0033794.1 1 1213 +
Chr2	stalkie_big_nohaplotig	CDS	56020250	56020759	.	-	0	Parent=FBgn0033794.1.mrna1;Target=FBgn0033794.1 2128 2637 +
Chr2	stalkie_big_nohaplotig	CDS	56020828	56021224	.	-	1	Parent=FBgn0033794.1.mrna1;Target=FBgn0033794.1 1731 2127 +
Chr2	stalkie_big_nohaplotig	CDS	56021368	56021600	.	-	0	Parent=FBgn0033794.1.mrna1;Target=FBgn0033794.1 1498 1730 +
Chr2	stalkie_big_nohaplotig	CDS	56021760	56022043	.	-	2	Parent=FBgn0033794.1.mrna1;Target=FBgn0033794.1 1214 1497 +
Chr2	stalkie_big_nohaplotig	CDS	56023158	56024370	.	-	0	Parent=FBgn0033794.1.mrna1;Target=FBgn0033794.1 1 1213 +
Chr2	gffcl	locus	55965829	55966614	.	-	.	ID=RLOC_00017526;geneIDs=comp143209_c0_seq1.path1;transcripts=comp143209_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55965829	55966614	.	-	.	ID=comp143209_c0_seq1.mrna1;geneID=comp143209_c0_seq1.path1;Name=comp143209_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=784;mismatches=2;indels=5;unknowns=0;Target=comp143209_c0_seq1 791 1 .;CDS_Target=comp143209_c0_seq1 486 415 .;locus=RLOC_00017526
Chr2	stalkie_big_nohaplotig	exon	55965829	55966614	99	-	.	Parent=comp143209_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	55966130	55966201	.	-	0	Parent=comp143209_c0_seq1.mrna1
Chr2	gffcl	locus	55978120	55987427	.	-	.	ID=RLOC_00017527;geneIDs=FBgn0259876.1.path1;transcripts=FBgn0259876.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	55978120	55987427	.	-	.	ID=FBgn0259876.1.mrna1;geneID=FBgn0259876.1.path1;Name=FBgn0259876.1;Dir=sensecoverage=100.0;identity=99.9;matches=4683;mismatches=6;indels=0;unknowns=0;locus=RLOC_00017527
Chr2	stalkie_big_nohaplotig	exon	55978120	55979082	100	-	.	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 3727 4689 +
Chr2	stalkie_big_nohaplotig	exon	55979557	55979694	100	-	.	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 3589 3726 +
Chr2	stalkie_big_nohaplotig	exon	55981863	55982648	99	-	.	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 2803 3588 +
Chr2	stalkie_big_nohaplotig	exon	55982868	55982975	100	-	.	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 2695 2802 +
Chr2	stalkie_big_nohaplotig	exon	55983056	55983432	100	-	.	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 2318 2694 +
Chr2	stalkie_big_nohaplotig	exon	55983489	55983775	100	-	.	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 2031 2317 +
Chr2	stalkie_big_nohaplotig	exon	55983841	55984037	100	-	.	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 1834 2030 +
Chr2	stalkie_big_nohaplotig	exon	55984117	55984245	99	-	.	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 1705 1833 +
Chr2	stalkie_big_nohaplotig	exon	55984306	55984596	99	-	.	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 1414 1704 +
Chr2	stalkie_big_nohaplotig	exon	55985772	55986009	99	-	.	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 1176 1413 +
Chr2	stalkie_big_nohaplotig	exon	55986067	55986270	100	-	.	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 972 1175 +
Chr2	stalkie_big_nohaplotig	exon	55986337	55986953	100	-	.	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 355 971 +
Chr2	stalkie_big_nohaplotig	exon	55987011	55987187	100	-	.	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 178 354 +
Chr2	stalkie_big_nohaplotig	exon	55987251	55987427	100	-	.	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 1 177 +
Chr2	stalkie_big_nohaplotig	CDS	55978120	55979082	.	-	0	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 3727 4689 +
Chr2	stalkie_big_nohaplotig	CDS	55979557	55979694	.	-	0	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 3589 3726 +
Chr2	stalkie_big_nohaplotig	CDS	55981863	55982648	.	-	0	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 2803 3588 +
Chr2	stalkie_big_nohaplotig	CDS	55982868	55982975	.	-	0	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 2695 2802 +
Chr2	stalkie_big_nohaplotig	CDS	55983056	55983432	.	-	2	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 2318 2694 +
Chr2	stalkie_big_nohaplotig	CDS	55983489	55983775	.	-	1	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 2031 2317 +
Chr2	stalkie_big_nohaplotig	CDS	55983841	55984037	.	-	0	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 1834 2030 +
Chr2	stalkie_big_nohaplotig	CDS	55984117	55984245	.	-	0	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 1705 1833 +
Chr2	stalkie_big_nohaplotig	CDS	55984306	55984596	.	-	0	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 1414 1704 +
Chr2	stalkie_big_nohaplotig	CDS	55985772	55986009	.	-	1	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 1176 1413 +
Chr2	stalkie_big_nohaplotig	CDS	55986067	55986270	.	-	1	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 972 1175 +
Chr2	stalkie_big_nohaplotig	CDS	55986337	55986953	.	-	0	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 355 971 +
Chr2	stalkie_big_nohaplotig	CDS	55987011	55987187	.	-	0	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 178 354 +
Chr2	stalkie_big_nohaplotig	CDS	55987251	55987427	.	-	0	Parent=FBgn0259876.1.mrna1;Target=FBgn0259876.1 1 177 +
Chr2	gffcl	locus	56013866	56014508	.	-	.	ID=RLOC_00017528;geneIDs=FBgn0033793.1.path1;transcripts=FBgn0033793.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56013866	56014508	.	-	.	ID=FBgn0033793.1.mrna1;geneID=FBgn0033793.1.path1;Name=FBgn0033793.1;Dir=sensecoverage=100.0;identity=100.0;matches=519;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017528
Chr2	stalkie_big_nohaplotig	exon	56013866	56014144	100	-	.	Parent=FBgn0033793.1.mrna1;Target=FBgn0033793.1 241 519 +
Chr2	stalkie_big_nohaplotig	exon	56014206	56014384	100	-	.	Parent=FBgn0033793.1.mrna1;Target=FBgn0033793.1 62 240 +
Chr2	stalkie_big_nohaplotig	exon	56014448	56014508	100	-	.	Parent=FBgn0033793.1.mrna1;Target=FBgn0033793.1 1 61 +
Chr2	stalkie_big_nohaplotig	CDS	56013866	56014144	.	-	0	Parent=FBgn0033793.1.mrna1;Target=FBgn0033793.1 241 519 +
Chr2	stalkie_big_nohaplotig	CDS	56014206	56014384	.	-	2	Parent=FBgn0033793.1.mrna1;Target=FBgn0033793.1 62 240 +
Chr2	stalkie_big_nohaplotig	CDS	56014448	56014508	.	-	0	Parent=FBgn0033793.1.mrna1;Target=FBgn0033793.1 1 61 +
Chr2	gffcl	locus	56099531	56101469	.	+	.	ID=RLOC_00017529;geneIDs=AAEL017378.1.path4;transcripts=AAEL017378.1.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	56099531	56101469	.	+	.	ID=AAEL017378.1.mrna4;geneID=AAEL017378.1.path4;Name=AAEL017378.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1927;mismatches=10;indels=6;unknowns=0;Target=AAEL017378.1 1941 1 .;CDS_Target=AAEL017378.1 1941 88 .;locus=RLOC_00017529
Chr2	stalkie_big_nohaplotig	exon	56099531	56101469	99	+	.	Parent=AAEL017378.1.mrna4
Chr2	stalkie_big_nohaplotig	CDS	56099619	56101469	.	+	0	Parent=AAEL017378.1.mrna4
Chr2	gffcl	locus	56101472	56104035	.	+	.	ID=RLOC_00017530;geneIDs=comp163535_c2_seq1.path2;transcripts=comp163535_c2_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	56101472	56104035	.	+	.	ID=comp163535_c2_seq1.mrna2;geneID=comp163535_c2_seq1.path2;Name=comp163535_c2_seq1;Dir=indeterminatecoverage=57.3;identity=99.2;matches=2550;mismatches=13;indels=8;unknowns=0;Target=comp163535_c2_seq1 2570 1 .;CDS_Target=comp163535_c2_seq1 2392 2 .;locus=RLOC_00017530
Chr2	stalkie_big_nohaplotig	exon	56101472	56104035	99	+	.	Parent=comp163535_c2_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	56101473	56103857	.	+	0	Parent=comp163535_c2_seq1.mrna2
Chr2	gffcl	locus	56207998	56208520	.	+	.	ID=RLOC_00017531;geneIDs=comp155342_c0_seq1.path1;transcripts=comp155342_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56207998	56208520	.	+	.	ID=comp155342_c0_seq1.mrna1;geneID=comp155342_c0_seq1.path1;Name=comp155342_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=523;mismatches=0;indels=0;unknowns=0;Target=comp155342_c0_seq1 523 1 .;CDS_Target=comp155342_c0_seq1 337 242 .;locus=RLOC_00017531
Chr2	stalkie_big_nohaplotig	exon	56207998	56208520	100	+	.	Parent=comp155342_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	56208239	56208334	.	+	0	Parent=comp155342_c0_seq1.mrna1
Chr2	gffcl	locus	56214128	56214573	.	-	.	ID=RLOC_00017532;geneIDs=comp144073_c0_seq1.path3;transcripts=comp144073_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	56214128	56214573	.	-	.	ID=comp144073_c0_seq1.mrna3;geneID=comp144073_c0_seq1.path3;Name=comp144073_c0_seq1;Dir=sensecoverage=84.1;identity=98.7;matches=313;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017532
Chr2	stalkie_big_nohaplotig	exon	56214128	56214308	100	-	.	Parent=comp144073_c0_seq1.mrna3;Target=comp144073_c0_seq1 137 317 +
Chr2	stalkie_big_nohaplotig	exon	56214369	56214441	100	-	.	Parent=comp144073_c0_seq1.mrna3;Target=comp144073_c0_seq1 64 136 +
Chr2	stalkie_big_nohaplotig	exon	56214511	56214573	93	-	.	Parent=comp144073_c0_seq1.mrna3;Target=comp144073_c0_seq1 1 63 +
Chr2	stalkie_big_nohaplotig	CDS	56214214	56214308	.	-	2	Parent=comp144073_c0_seq1.mrna3;Target=comp144073_c0_seq1 137 231 +
Chr2	stalkie_big_nohaplotig	CDS	56214369	56214441	.	-	0	Parent=comp144073_c0_seq1.mrna3;Target=comp144073_c0_seq1 64 136 +
Chr2	gffcl	locus	56379092	56379348	.	+	.	ID=RLOC_00017533;geneIDs=comp131059_c0_seq1.path1;transcripts=comp131059_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56379092	56379348	.	+	.	ID=comp131059_c0_seq1.mrna1;geneID=comp131059_c0_seq1.path1;Name=comp131059_c0_seq1;Dir=indeterminatecoverage=97.7;identity=99.2;matches=257;mismatches=0;indels=2;unknowns=0;Target=comp131059_c0_seq1 259 1 .;CDS_Target=comp131059_c0_seq1 99 1 .;locus=RLOC_00017533
Chr2	stalkie_big_nohaplotig	exon	56379092	56379348	99	+	.	Parent=comp131059_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	56379092	56379188	.	+	0	Parent=comp131059_c0_seq1.mrna1
Chr2	gffcl	locus	56379520	56380884	.	-	.	ID=RLOC_00017534;geneIDs=comp148313_c0_seq1.path1,comp157422_c0_seq1.path1;transcripts=comp157422_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56379520	56380491	.	-	.	ID=comp157422_c0_seq1.mrna1;geneID=comp157422_c0_seq1.path1;Name=comp157422_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=971;mismatches=1;indels=0;unknowns=0;Target=comp157422_c0_seq1 972 1 .;CDS_Target=comp157422_c0_seq1 496 257 .;locus=RLOC_00017534
Chr2	stalkie_big_nohaplotig	exon	56379520	56380491	99	-	.	Parent=comp157422_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	56379996	56380235	.	-	0	Parent=comp157422_c0_seq1.mrna1
Chr2	gffcl	locus	56381352	56382034	.	+	.	ID=RLOC_00017535;geneIDs=comp154795_c0_seq1.path1;transcripts=comp154795_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56381352	56382034	.	+	.	ID=comp154795_c0_seq1.mrna1;geneID=comp154795_c0_seq1.path1;Name=comp154795_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.4;matches=679;mismatches=4;indels=0;unknowns=0;Target=comp154795_c0_seq1 684 2 .;CDS_Target=comp154795_c0_seq1 318 238 .;locus=RLOC_00017535
Chr2	stalkie_big_nohaplotig	exon	56381352	56382034	99	+	.	Parent=comp154795_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	56381588	56381668	.	+	0	Parent=comp154795_c0_seq1.mrna1
Chr2	gffcl	locus	56382086	56382421	.	-	.	ID=RLOC_00017536;geneIDs=comp106615_c0_seq1.path1;transcripts=comp106615_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56382086	56382421	.	-	.	ID=comp106615_c0_seq1.mrna1;geneID=comp106615_c0_seq1.path1;Name=comp106615_c0_seq1;Dir=indeterminatecoverage=97.3;identity=97.0;matches=326;mismatches=0;indels=10;unknowns=0;Target=comp106615_c0_seq1 335 10 .;CDS_Target=comp106615_c0_seq1 80 12 .;locus=RLOC_00017536
Chr2	stalkie_big_nohaplotig	exon	56382086	56382421	97	-	.	Parent=comp106615_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	56382351	56382419	.	-	0	Parent=comp106615_c0_seq1.mrna1
Chr2	gffcl	locus	56382440	56382941	.	-	.	ID=RLOC_00017537;geneIDs=comp148248_c0_seq1.path1;transcripts=comp148248_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56382440	56382941	.	-	.	ID=comp148248_c0_seq1.mrna1;geneID=comp148248_c0_seq1.path1;Name=comp148248_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=499;mismatches=3;indels=10;unknowns=0;Target=comp148248_c0_seq1 512 1 .;CDS_Target=comp148248_c0_seq1 454 407 .;locus=RLOC_00017537
Chr2	stalkie_big_nohaplotig	exon	56382440	56382941	97	-	.	Parent=comp148248_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	56382498	56382545	.	-	0	Parent=comp148248_c0_seq1.mrna1
Chr2	gffcl	locus	56461123	56461718	.	-	.	ID=RLOC_00017539;geneIDs=comp1197051_c0_seq1.path1;transcripts=comp1197051_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56461123	56461718	.	-	.	ID=comp1197051_c0_seq1.mrna1;geneID=comp1197051_c0_seq1.path1;Name=comp1197051_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.8;matches=595;mismatches=1;indels=0;unknowns=0;Target=comp1197051_c0_seq1 598 3 .;CDS_Target=comp1197051_c0_seq1 576 442 .;locus=RLOC_00017539
Chr2	stalkie_big_nohaplotig	exon	56461123	56461718	99	-	.	Parent=comp1197051_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	56461145	56461279	.	-	0	Parent=comp1197051_c0_seq1.mrna1
Chr2	gffcl	locus	56475961	56478714	.	+	.	ID=RLOC_00017540;geneIDs=ORF787.path1;transcripts=ORF787.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56475961	56478714	.	+	.	ID=ORF787.mrna1;geneID=ORF787.path1;Name=ORF787;Dir=sensecoverage=100.0;identity=98.7;matches=1413;mismatches=18;indels=0;unknowns=0;locus=RLOC_00017540
Chr2	stalkie_big_nohaplotig	exon	56475961	56476204	99	+	.	Parent=ORF787.mrna1;Target=ORF787 1 244 +
Chr2	stalkie_big_nohaplotig	exon	56477202	56477315	98	+	.	Parent=ORF787.mrna1;Target=ORF787 245 358 +
Chr2	stalkie_big_nohaplotig	exon	56477642	56478714	98	+	.	Parent=ORF787.mrna1;Target=ORF787 359 1431 +
Chr2	stalkie_big_nohaplotig	CDS	56475961	56476204	.	+	0	Parent=ORF787.mrna1;Target=ORF787 1 244 +
Chr2	stalkie_big_nohaplotig	CDS	56477202	56477315	.	+	2	Parent=ORF787.mrna1;Target=ORF787 245 358 +
Chr2	stalkie_big_nohaplotig	CDS	56477642	56478714	.	+	2	Parent=ORF787.mrna1;Target=ORF787 359 1431 +
Chr2	gffcl	locus	56502160	56519583	.	-	.	ID=RLOC_00017541;geneIDs=FBgn0262169.1.path1;transcripts=FBgn0262169.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56502160	56519583	.	-	.	ID=FBgn0262169.1.mrna1;geneID=FBgn0262169.1.path1;Name=FBgn0262169.1;Dir=sensecoverage=100.0;identity=99.8;matches=1938;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017541
Chr2	stalkie_big_nohaplotig	exon	56502160	56502227	100	-	.	Parent=FBgn0262169.1.mrna1;Target=FBgn0262169.1 1874 1941 +
Chr2	stalkie_big_nohaplotig	exon	56502289	56502431	100	-	.	Parent=FBgn0262169.1.mrna1;Target=FBgn0262169.1 1731 1873 +
Chr2	stalkie_big_nohaplotig	exon	56502490	56502624	100	-	.	Parent=FBgn0262169.1.mrna1;Target=FBgn0262169.1 1596 1730 +
Chr2	stalkie_big_nohaplotig	exon	56504075	56504349	99	-	.	Parent=FBgn0262169.1.mrna1;Target=FBgn0262169.1 1321 1595 +
Chr2	stalkie_big_nohaplotig	exon	56504412	56504503	100	-	.	Parent=FBgn0262169.1.mrna1;Target=FBgn0262169.1 1229 1320 +
Chr2	stalkie_big_nohaplotig	exon	56504691	56505011	100	-	.	Parent=FBgn0262169.1.mrna1;Target=FBgn0262169.1 908 1228 +
Chr2	stalkie_big_nohaplotig	exon	56507065	56507179	100	-	.	Parent=FBgn0262169.1.mrna1;Target=FBgn0262169.1 793 907 +
Chr2	stalkie_big_nohaplotig	exon	56507247	56507758	99	-	.	Parent=FBgn0262169.1.mrna1;Target=FBgn0262169.1 281 792 +
Chr2	stalkie_big_nohaplotig	exon	56508067	56508223	100	-	.	Parent=FBgn0262169.1.mrna1;Target=FBgn0262169.1 124 280 +
Chr2	stalkie_big_nohaplotig	exon	56519461	56519583	100	-	.	Parent=FBgn0262169.1.mrna1;Target=FBgn0262169.1 1 123 +
Chr2	stalkie_big_nohaplotig	CDS	56502160	56502227	.	-	2	Parent=FBgn0262169.1.mrna1;Target=FBgn0262169.1 1874 1941 +
Chr2	stalkie_big_nohaplotig	CDS	56502289	56502431	.	-	1	Parent=FBgn0262169.1.mrna1;Target=FBgn0262169.1 1731 1873 +
Chr2	stalkie_big_nohaplotig	CDS	56502490	56502624	.	-	1	Parent=FBgn0262169.1.mrna1;Target=FBgn0262169.1 1596 1730 +
Chr2	stalkie_big_nohaplotig	CDS	56504075	56504349	.	-	0	Parent=FBgn0262169.1.mrna1;Target=FBgn0262169.1 1321 1595 +
Chr2	stalkie_big_nohaplotig	CDS	56504412	56504503	.	-	2	Parent=FBgn0262169.1.mrna1;Target=FBgn0262169.1 1229 1320 +
Chr2	stalkie_big_nohaplotig	CDS	56504691	56505011	.	-	2	Parent=FBgn0262169.1.mrna1;Target=FBgn0262169.1 908 1228 +
Chr2	stalkie_big_nohaplotig	CDS	56507065	56507179	.	-	0	Parent=FBgn0262169.1.mrna1;Target=FBgn0262169.1 793 907 +
Chr2	stalkie_big_nohaplotig	CDS	56507247	56507758	.	-	2	Parent=FBgn0262169.1.mrna1;Target=FBgn0262169.1 281 792 +
Chr2	stalkie_big_nohaplotig	CDS	56508067	56508223	.	-	0	Parent=FBgn0262169.1.mrna1;Target=FBgn0262169.1 124 280 +
Chr2	stalkie_big_nohaplotig	CDS	56519461	56519583	.	-	0	Parent=FBgn0262169.1.mrna1;Target=FBgn0262169.1 1 123 +
Chr2	gffcl	locus	56574459	56575580	.	-	.	ID=RLOC_00017543;geneIDs=comp149624_c0_seq1.path1;transcripts=comp149624_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56574459	56575580	.	-	.	ID=comp149624_c0_seq1.mrna1;geneID=comp149624_c0_seq1.path1;Name=comp149624_c0_seq1;Dir=sensecoverage=98.7;identity=99.8;matches=1048;mismatches=0;indels=2;unknowns=0;Target=comp149624_c0_seq1 646 720 +;locus=RLOC_00017543
Chr2	stalkie_big_nohaplotig	exon	56574459	56575478	99	-	.	Parent=comp149624_c0_seq1.mrna1;Target=comp149624_c0_seq1 30 1049 +
Chr2	stalkie_big_nohaplotig	exon	56575552	56575580	100	-	.	Parent=comp149624_c0_seq1.mrna1;Target=comp149624_c0_seq1 1 29 +
Chr2	stalkie_big_nohaplotig	CDS	56574788	56574861	.	-	0	Parent=comp149624_c0_seq1.mrna1
Chr2	gffcl	locus	56579077	56580643	.	-	.	ID=RLOC_00017544;geneIDs=comp138340_c0_seq1.path1;transcripts=comp138340_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56579077	56580643	.	-	.	ID=comp138340_c0_seq1.mrna1;geneID=comp138340_c0_seq1.path1;Name=comp138340_c0_seq1;Dir=indeterminatecoverage=98.2;identity=97.1;matches=568;mismatches=7;indels=10;unknowns=0;Target=comp138340_c0_seq1 582 337 .;locus=RLOC_00017544
Chr2	stalkie_big_nohaplotig	exon	56579077	56579368	98	-	.	Parent=comp138340_c0_seq1.mrna1;Target=comp138340_c0_seq1 594 303 .
Chr2	stalkie_big_nohaplotig	exon	56579850	56579871	95	-	.	Parent=comp138340_c0_seq1.mrna1;Target=comp138340_c0_seq1 302 281 .
Chr2	stalkie_big_nohaplotig	exon	56580382	56580643	95	-	.	Parent=comp138340_c0_seq1.mrna1;Target=comp138340_c0_seq1 280 11 .
Chr2	stalkie_big_nohaplotig	CDS	56579089	56579334	.	-	0	Parent=comp138340_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56655987	56664139	.	+	.	ID=comp161170_c0_seq1.mrna1;geneID=comp161170_c0_seq1.path1;Name=comp161170_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=3728;mismatches=17;indels=0;unknowns=0;Target=comp161170_c0_seq1 2699 1941 .;locus=RLOC_00017546
Chr2	stalkie_big_nohaplotig	exon	56655987	56657327	99	+	.	Parent=comp161170_c0_seq1.mrna1;Target=comp161170_c0_seq1 1341 1 .
Chr2	stalkie_big_nohaplotig	exon	56661670	56663644	99	+	.	Parent=comp161170_c0_seq1.mrna1;Target=comp161170_c0_seq1 3316 1342 .
Chr2	stalkie_big_nohaplotig	exon	56663711	56664139	99	+	.	Parent=comp161170_c0_seq1.mrna1;Target=comp161170_c0_seq1 3745 3317 .
Chr2	stalkie_big_nohaplotig	CDS	56662269	56663027	.	+	0	Parent=comp161170_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56657129	56663024	.	+	.	ID=FBgn0033627.1.mrna1;geneID=FBgn0033627.1.path1;Name=FBgn0033627.1;Dir=sensecoverage=100.0;identity=99.5;matches=1490;mismatches=7;indels=0;unknowns=0;locus=RLOC_00017546
Chr2	stalkie_big_nohaplotig	exon	56657129	56657327	100	+	.	Parent=FBgn0033627.1.mrna1;Target=FBgn0033627.1 1 199 +
Chr2	stalkie_big_nohaplotig	exon	56661670	56661820	99	+	.	Parent=FBgn0033627.1.mrna1;Target=FBgn0033627.1 200 350 +
Chr2	stalkie_big_nohaplotig	exon	56661878	56663024	99	+	.	Parent=FBgn0033627.1.mrna1;Target=FBgn0033627.1 351 1497 +
Chr2	stalkie_big_nohaplotig	CDS	56657129	56657327	.	+	0	Parent=FBgn0033627.1.mrna1;Target=FBgn0033627.1 1 199 +
Chr2	stalkie_big_nohaplotig	CDS	56661670	56661820	.	+	2	Parent=FBgn0033627.1.mrna1;Target=FBgn0033627.1 200 350 +
Chr2	stalkie_big_nohaplotig	CDS	56661878	56663024	.	+	1	Parent=FBgn0033627.1.mrna1;Target=FBgn0033627.1 351 1497 +
Chr2	stalkie_big_nohaplotig	mRNA	56723020	56723639	.	+	.	ID=comp151995_c0_seq1.mrna1;geneID=comp151995_c0_seq1.path1;Name=comp151995_c0_seq1;Dir=indeterminatecoverage=99.6;identity=95.8;matches=542;mismatches=19;indels=5;unknowns=0;Target=comp151995_c0_seq1 393 331 .;locus=RLOC_00017546
Chr2	stalkie_big_nohaplotig	exon	56723020	56723139	81	+	.	Parent=comp151995_c0_seq1.mrna1;Target=comp151995_c0_seq1 127 3 .
Chr2	stalkie_big_nohaplotig	exon	56723199	56723639	99	+	.	Parent=comp151995_c0_seq1.mrna1;Target=comp151995_c0_seq1 570 130 .
Chr2	stalkie_big_nohaplotig	CDS	56723400	56723462	.	+	0	Parent=comp151995_c0_seq1.mrna1
Chr2	gffcl	locus	56635494	56636156	.	-	.	ID=RLOC_00017547;geneIDs=FBgn0034626.1.path1;transcripts=FBgn0034626.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56635494	56636156	.	-	.	ID=FBgn0034626.1.mrna1;geneID=FBgn0034626.1.path1;Name=FBgn0034626.1;Dir=sensecoverage=100.0;identity=100.0;matches=531;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017547
Chr2	stalkie_big_nohaplotig	exon	56635494	56635767	100	-	.	Parent=FBgn0034626.1.mrna1;Target=FBgn0034626.1 258 531 +
Chr2	stalkie_big_nohaplotig	exon	56635835	56635916	100	-	.	Parent=FBgn0034626.1.mrna1;Target=FBgn0034626.1 176 257 +
Chr2	stalkie_big_nohaplotig	exon	56635982	56636156	100	-	.	Parent=FBgn0034626.1.mrna1;Target=FBgn0034626.1 1 175 +
Chr2	stalkie_big_nohaplotig	CDS	56635494	56635767	.	-	1	Parent=FBgn0034626.1.mrna1;Target=FBgn0034626.1 258 531 +
Chr2	stalkie_big_nohaplotig	CDS	56635835	56635916	.	-	2	Parent=FBgn0034626.1.mrna1;Target=FBgn0034626.1 176 257 +
Chr2	stalkie_big_nohaplotig	CDS	56635982	56636156	.	-	0	Parent=FBgn0034626.1.mrna1;Target=FBgn0034626.1 1 175 +
Chr2	gffcl	locus	56638206	56639505	.	-	.	ID=RLOC_00017548;geneIDs=FBgn0034627.1.path1;transcripts=FBgn0034627.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56638206	56639505	.	-	.	ID=FBgn0034627.1.mrna1;geneID=FBgn0034627.1.path1;Name=FBgn0034627.1;Dir=sensecoverage=99.6;identity=99.7;matches=1130;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017548
Chr2	stalkie_big_nohaplotig	exon	56638206	56639050	99	-	.	Parent=FBgn0034627.1.mrna1;Target=FBgn0034627.1 289 1133 +
Chr2	stalkie_big_nohaplotig	exon	56639107	56639372	100	-	.	Parent=FBgn0034627.1.mrna1;Target=FBgn0034627.1 23 288 +
Chr2	stalkie_big_nohaplotig	exon	56639484	56639505	100	-	.	Parent=FBgn0034627.1.mrna1;Target=FBgn0034627.1 1 22 +
Chr2	stalkie_big_nohaplotig	CDS	56638208	56639050	.	-	0	Parent=FBgn0034627.1.mrna1;Target=FBgn0034627.1 289 1131 +
Chr2	stalkie_big_nohaplotig	CDS	56639107	56639372	.	-	2	Parent=FBgn0034627.1.mrna1;Target=FBgn0034627.1 23 288 +
Chr2	stalkie_big_nohaplotig	CDS	56639484	56639505	.	-	0	Parent=FBgn0034627.1.mrna1;Target=FBgn0034627.1 1 22 +
Chr2	gffcl	locus	56640874	56641677	.	+	.	ID=RLOC_00017549;geneIDs=FBgn0024188.1.path1;transcripts=FBgn0024188.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56640874	56641677	.	+	.	ID=FBgn0024188.1.mrna1;geneID=FBgn0024188.1.path1;Name=FBgn0024188.1;Dir=sensecoverage=100.0;identity=99.7;matches=685;mismatches=1;indels=1;unknowns=0;locus=RLOC_00017549
Chr2	stalkie_big_nohaplotig	exon	56640874	56641034	99	+	.	Parent=FBgn0024188.1.mrna1;Target=FBgn0024188.1 1 161 +
Chr2	stalkie_big_nohaplotig	exon	56641098	56641421	100	+	.	Parent=FBgn0024188.1.mrna1;Target=FBgn0024188.1 162 485 +
Chr2	stalkie_big_nohaplotig	exon	56641477	56641677	99	+	.	Parent=FBgn0024188.1.mrna1;Target=FBgn0024188.1 486 687 +
Chr2	stalkie_big_nohaplotig	CDS	56640874	56641034	.	+	0	Parent=FBgn0024188.1.mrna1;Target=FBgn0024188.1 1 161 +
Chr2	stalkie_big_nohaplotig	CDS	56641098	56641421	.	+	1	Parent=FBgn0024188.1.mrna1;Target=FBgn0024188.1 162 485 +
Chr2	stalkie_big_nohaplotig	CDS	56641477	56641677	.	+	1	Parent=FBgn0024188.1.mrna1;Target=FBgn0024188.1 486 687 +
Chr2	gffcl	locus	56655077	56655723	.	+	.	ID=RLOC_00017551;geneIDs=comp78684_c0_seq1.path1;transcripts=comp78684_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56655077	56655723	.	+	.	ID=comp78684_c0_seq1.mrna1;geneID=comp78684_c0_seq1.path1;Name=comp78684_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=647;mismatches=0;indels=0;unknowns=0;Target=comp78684_c0_seq1 647 1 .;CDS_Target=comp78684_c0_seq1 469 353 .;locus=RLOC_00017551
Chr2	stalkie_big_nohaplotig	exon	56655077	56655723	100	+	.	Parent=comp78684_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	56655429	56655545	.	+	0	Parent=comp78684_c0_seq1.mrna1
Chr2	gffcl	locus	56663387	56663971	.	-	.	ID=RLOC_00017552;geneIDs=FBgn0021795.1.path1;transcripts=FBgn0021795.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56663387	56663971	.	-	.	ID=FBgn0021795.1.mrna1;geneID=FBgn0021795.1.path1;Name=FBgn0021795.1;Dir=sensecoverage=100.0;identity=100.0;matches=519;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017552
Chr2	stalkie_big_nohaplotig	exon	56663387	56663644	100	-	.	Parent=FBgn0021795.1.mrna1;Target=FBgn0021795.1 262 519 +
Chr2	stalkie_big_nohaplotig	exon	56663711	56663971	100	-	.	Parent=FBgn0021795.1.mrna1;Target=FBgn0021795.1 1 261 +
Chr2	stalkie_big_nohaplotig	CDS	56663387	56663644	.	-	0	Parent=FBgn0021795.1.mrna1;Target=FBgn0021795.1 262 519 +
Chr2	stalkie_big_nohaplotig	CDS	56663711	56663971	.	-	0	Parent=FBgn0021795.1.mrna1;Target=FBgn0021795.1 1 261 +
Chr2	gffcl	locus	56678016	56679568	.	+	.	ID=RLOC_00017553;geneIDs=FBgn0033628.1.path1;transcripts=FBgn0033628.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56678016	56679568	.	+	.	ID=FBgn0033628.1.mrna1;geneID=FBgn0033628.1.path1;Name=FBgn0033628.1;Dir=sensecoverage=100.0;identity=99.0;matches=1137;mismatches=12;indels=0;unknowns=0;locus=RLOC_00017553
Chr2	stalkie_big_nohaplotig	exon	56678016	56678051	97	+	.	Parent=FBgn0033628.1.mrna1;Target=FBgn0033628.1 1 36 +
Chr2	stalkie_big_nohaplotig	exon	56678398	56679004	98	+	.	Parent=FBgn0033628.1.mrna1;Target=FBgn0033628.1 37 643 +
Chr2	stalkie_big_nohaplotig	exon	56679063	56679568	99	+	.	Parent=FBgn0033628.1.mrna1;Target=FBgn0033628.1 644 1149 +
Chr2	stalkie_big_nohaplotig	CDS	56678016	56678051	.	+	0	Parent=FBgn0033628.1.mrna1;Target=FBgn0033628.1 1 36 +
Chr2	stalkie_big_nohaplotig	CDS	56678398	56679004	.	+	0	Parent=FBgn0033628.1.mrna1;Target=FBgn0033628.1 37 643 +
Chr2	stalkie_big_nohaplotig	CDS	56679063	56679568	.	+	2	Parent=FBgn0033628.1.mrna1;Target=FBgn0033628.1 644 1149 +
Chr2	gffcl	locus	56683176	56685034	.	+	.	ID=RLOC_00017554;geneIDs=FBgn0033479.1.path1;transcripts=FBgn0033479.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56683176	56685034	.	+	.	ID=FBgn0033479.1.mrna1;geneID=FBgn0033479.1.path1;Name=FBgn0033479.1;Dir=sensecoverage=65.0;identity=99.8;matches=1743;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017554
Chr2	stalkie_big_nohaplotig	exon	56683176	56683399	100	+	.	Parent=FBgn0033479.1.mrna1;Target=FBgn0033479.1 1 224 +
Chr2	stalkie_big_nohaplotig	exon	56683459	56684060	99	+	.	Parent=FBgn0033479.1.mrna1;Target=FBgn0033479.1 225 826 +
Chr2	stalkie_big_nohaplotig	exon	56684115	56685034	100	+	.	Parent=FBgn0033479.1.mrna1;Target=FBgn0033479.1 827 1746 +
Chr2	stalkie_big_nohaplotig	CDS	56683176	56683399	.	+	0	Parent=FBgn0033479.1.mrna1;Target=FBgn0033479.1 1 224 +
Chr2	stalkie_big_nohaplotig	CDS	56683459	56684060	.	+	1	Parent=FBgn0033479.1.mrna1;Target=FBgn0033479.1 225 826 +
Chr2	stalkie_big_nohaplotig	CDS	56684115	56685034	.	+	2	Parent=FBgn0033479.1.mrna1;Target=FBgn0033479.1 827 1746 +
Chr2	gffcl	locus	56725816	56726716	.	-	.	ID=RLOC_00017555;geneIDs=FBgn0037481.1.path1;transcripts=FBgn0037481.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56725816	56726716	.	-	.	ID=FBgn0037481.1.mrna1;geneID=FBgn0037481.1.path1;Name=FBgn0037481.1;Dir=sensecoverage=100.0;identity=99.7;matches=655;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017555
Chr2	stalkie_big_nohaplotig	exon	56725816	56725896	98	-	.	Parent=FBgn0037481.1.mrna1;Target=FBgn0037481.1 577 657 +
Chr2	stalkie_big_nohaplotig	exon	56725952	56726024	100	-	.	Parent=FBgn0037481.1.mrna1;Target=FBgn0037481.1 504 576 +
Chr2	stalkie_big_nohaplotig	exon	56726080	56726233	100	-	.	Parent=FBgn0037481.1.mrna1;Target=FBgn0037481.1 350 503 +
Chr2	stalkie_big_nohaplotig	exon	56726296	56726470	100	-	.	Parent=FBgn0037481.1.mrna1;Target=FBgn0037481.1 175 349 +
Chr2	stalkie_big_nohaplotig	exon	56726543	56726716	99	-	.	Parent=FBgn0037481.1.mrna1;Target=FBgn0037481.1 1 174 +
Chr2	stalkie_big_nohaplotig	CDS	56725816	56725896	.	-	0	Parent=FBgn0037481.1.mrna1;Target=FBgn0037481.1 577 657 +
Chr2	stalkie_big_nohaplotig	CDS	56725952	56726024	.	-	1	Parent=FBgn0037481.1.mrna1;Target=FBgn0037481.1 504 576 +
Chr2	stalkie_big_nohaplotig	CDS	56726080	56726233	.	-	2	Parent=FBgn0037481.1.mrna1;Target=FBgn0037481.1 350 503 +
Chr2	stalkie_big_nohaplotig	CDS	56726296	56726470	.	-	0	Parent=FBgn0037481.1.mrna1;Target=FBgn0037481.1 175 349 +
Chr2	stalkie_big_nohaplotig	CDS	56726543	56726716	.	-	0	Parent=FBgn0037481.1.mrna1;Target=FBgn0037481.1 1 174 +
Chr2	gffcl	locus	56732506	58072155	.	-	.	ID=RLOC_00017556;geneIDs=FBgn0024754.1.path1,comp158430_c2_seq1.path1;transcripts=FBgn0024754.1.mrna1,comp158430_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56732506	56734482	.	-	.	ID=FBgn0024754.1.mrna1;geneID=FBgn0024754.1.path1;Name=FBgn0024754.1;Dir=sensecoverage=50.3;identity=93.9;matches=527;mismatches=24;indels=10;unknowns=100;locus=RLOC_00017556
Chr2	stalkie_big_nohaplotig	exon	56732506	56732680	54	-	.	Parent=FBgn0024754.1.mrna1;Target=FBgn0024754.1 487 651 +
Chr2	stalkie_big_nohaplotig	exon	56733716	56734070	100	-	.	Parent=FBgn0024754.1.mrna1;Target=FBgn0024754.1 132 486 +
Chr2	stalkie_big_nohaplotig	exon	56734133	56734208	100	-	.	Parent=FBgn0024754.1.mrna1;Target=FBgn0024754.1 56 131 +
Chr2	stalkie_big_nohaplotig	exon	56734428	56734482	100	-	.	Parent=FBgn0024754.1.mrna1;Target=FBgn0024754.1 1 55 +
Chr2	stalkie_big_nohaplotig	CDS	56732506	56732680	.	-	0	Parent=FBgn0024754.1.mrna1;Target=FBgn0024754.1 487 651 +
Chr2	stalkie_big_nohaplotig	CDS	56733716	56734070	.	-	1	Parent=FBgn0024754.1.mrna1;Target=FBgn0024754.1 132 486 +
Chr2	stalkie_big_nohaplotig	CDS	56734133	56734208	.	-	2	Parent=FBgn0024754.1.mrna1;Target=FBgn0024754.1 56 131 +
Chr2	stalkie_big_nohaplotig	CDS	56734428	56734482	.	-	0	Parent=FBgn0024754.1.mrna1;Target=FBgn0024754.1 1 55 +
Chr2	stalkie_big_nohaplotig	mRNA	56733715	58072155	.	-	.	ID=comp158430_c2_seq1.mrna1;geneID=comp158430_c2_seq1.path1;Name=comp158430_c2_seq1;Dir=sensecoverage=46.5;identity=96.8;matches=984;mismatches=10;indels=23;unknowns=0;locus=RLOC_00017556
Chr2	stalkie_big_nohaplotig	exon	56733715	56734070	100	-	.	Parent=comp158430_c2_seq1.mrna1;Target=comp158430_c2_seq1 902 1257 +
Chr2	stalkie_big_nohaplotig	exon	56734133	56734208	100	-	.	Parent=comp158430_c2_seq1.mrna1;Target=comp158430_c2_seq1 826 901 +
Chr2	stalkie_big_nohaplotig	exon	56734428	56734865	95	-	.	Parent=comp158430_c2_seq1.mrna1;Target=comp158430_c2_seq1 369 825 +
Chr2	stalkie_big_nohaplotig	exon	56734981	56735063	87	-	.	Parent=comp158430_c2_seq1.mrna1;Target=comp158430_c2_seq1 286 368 +
Chr2	stalkie_big_nohaplotig	exon	58070732	58070766	97	-	.	Parent=comp158430_c2_seq1.mrna1;Target=comp158430_c2_seq1 244 278 +
Chr2	stalkie_big_nohaplotig	exon	58072148	58072155	100	-	.	Parent=comp158430_c2_seq1.mrna1;Target=comp158430_c2_seq1 236 243 +
Chr2	stalkie_big_nohaplotig	CDS	56733716	56734070	.	-	1	Parent=comp158430_c2_seq1.mrna1;Target=comp158430_c2_seq1 902 1256 +
Chr2	stalkie_big_nohaplotig	CDS	56734133	56734208	.	-	2	Parent=comp158430_c2_seq1.mrna1;Target=comp158430_c2_seq1 826 901 +
Chr2	stalkie_big_nohaplotig	CDS	56734428	56734479	.	-	0	Parent=comp158430_c2_seq1.mrna1;Target=comp158430_c2_seq1 774 825 +
Chr2	gffcl	locus	56736361	56737034	.	-	.	ID=RLOC_00017557;geneIDs=FBgn0013762.1.path1;transcripts=FBgn0013762.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56736361	56737034	.	-	.	ID=FBgn0013762.1.mrna1;geneID=FBgn0013762.1.path1;Name=FBgn0013762.1;Dir=sensecoverage=100.0;identity=99.6;matches=544;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017557
Chr2	stalkie_big_nohaplotig	exon	56736361	56736467	100	-	.	Parent=FBgn0013762.1.mrna1;Target=FBgn0013762.1 440 546 +
Chr2	stalkie_big_nohaplotig	exon	56736529	56736796	99	-	.	Parent=FBgn0013762.1.mrna1;Target=FBgn0013762.1 172 439 +
Chr2	stalkie_big_nohaplotig	exon	56736864	56737034	100	-	.	Parent=FBgn0013762.1.mrna1;Target=FBgn0013762.1 1 171 +
Chr2	stalkie_big_nohaplotig	CDS	56736361	56736467	.	-	2	Parent=FBgn0013762.1.mrna1;Target=FBgn0013762.1 440 546 +
Chr2	stalkie_big_nohaplotig	CDS	56736529	56736796	.	-	0	Parent=FBgn0013762.1.mrna1;Target=FBgn0013762.1 172 439 +
Chr2	stalkie_big_nohaplotig	CDS	56736864	56737034	.	-	0	Parent=FBgn0013762.1.mrna1;Target=FBgn0013762.1 1 171 +
Chr2	gffcl	locus	56738087	56750535	.	+	.	ID=RLOC_00017558;geneIDs=FBgn0015477.1.path1,comp161486_c0_seq1.path1;transcripts=comp161486_c0_seq1.mrna1,FBgn0015477.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56738087	56750535	.	+	.	ID=comp161486_c0_seq1.mrna1;geneID=comp161486_c0_seq1.path1;Name=comp161486_c0_seq1;Dir=sensecoverage=99.8;identity=99.8;matches=8944;mismatches=17;indels=0;unknowns=0;locus=RLOC_00017558
Chr2	stalkie_big_nohaplotig	exon	56738087	56738878	99	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 1 792 +
Chr2	stalkie_big_nohaplotig	exon	56739163	56739303	99	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 793 933 +
Chr2	stalkie_big_nohaplotig	exon	56739366	56739888	100	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 934 1456 +
Chr2	stalkie_big_nohaplotig	exon	56739946	56740197	100	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 1457 1708 +
Chr2	stalkie_big_nohaplotig	exon	56740260	56740512	100	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 1709 1961 +
Chr2	stalkie_big_nohaplotig	exon	56740577	56740755	100	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 1962 2140 +
Chr2	stalkie_big_nohaplotig	exon	56740824	56741031	100	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 2141 2348 +
Chr2	stalkie_big_nohaplotig	exon	56741091	56741501	100	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 2349 2759 +
Chr2	stalkie_big_nohaplotig	exon	56741558	56741707	100	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 2760 2909 +
Chr2	stalkie_big_nohaplotig	exon	56741763	56741954	99	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 2910 3101 +
Chr2	stalkie_big_nohaplotig	exon	56742020	56742139	100	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 3102 3221 +
Chr2	stalkie_big_nohaplotig	exon	56742193	56742281	100	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 3222 3310 +
Chr2	stalkie_big_nohaplotig	exon	56742337	56742505	100	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 3311 3479 +
Chr2	stalkie_big_nohaplotig	exon	56742566	56743333	99	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 3480 4247 +
Chr2	stalkie_big_nohaplotig	exon	56743417	56743646	100	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 4248 4477 +
Chr2	stalkie_big_nohaplotig	exon	56743706	56744166	99	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 4478 4938 +
Chr2	stalkie_big_nohaplotig	exon	56744226	56744602	100	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 4939 5315 +
Chr2	stalkie_big_nohaplotig	exon	56744659	56745273	99	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 5316 5930 +
Chr2	stalkie_big_nohaplotig	exon	56745344	56745519	100	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 5931 6106 +
Chr2	stalkie_big_nohaplotig	exon	56745582	56746092	99	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 6107 6617 +
Chr2	stalkie_big_nohaplotig	exon	56746428	56746751	100	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 6618 6941 +
Chr2	stalkie_big_nohaplotig	exon	56746814	56746983	100	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 6942 7111 +
Chr2	stalkie_big_nohaplotig	exon	56747045	56747252	100	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 7112 7319 +
Chr2	stalkie_big_nohaplotig	exon	56747317	56747484	100	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 7320 7487 +
Chr2	stalkie_big_nohaplotig	exon	56747540	56747662	100	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 7488 7610 +
Chr2	stalkie_big_nohaplotig	exon	56747725	56747983	99	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 7611 7869 +
Chr2	stalkie_big_nohaplotig	exon	56748067	56748593	100	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 7870 8396 +
Chr2	stalkie_big_nohaplotig	exon	56748650	56748837	99	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 8397 8584 +
Chr2	stalkie_big_nohaplotig	exon	56750085	56750296	100	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 8585 8796 +
Chr2	stalkie_big_nohaplotig	exon	56750371	56750535	100	+	.	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 8797 8961 +
Chr2	stalkie_big_nohaplotig	CDS	56739719	56739888	.	+	0	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 1287 1456 +
Chr2	stalkie_big_nohaplotig	CDS	56739946	56740197	.	+	1	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 1457 1708 +
Chr2	stalkie_big_nohaplotig	CDS	56740260	56740512	.	+	1	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 1709 1961 +
Chr2	stalkie_big_nohaplotig	CDS	56740577	56740755	.	+	0	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 1962 2140 +
Chr2	stalkie_big_nohaplotig	CDS	56740824	56741031	.	+	1	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 2141 2348 +
Chr2	stalkie_big_nohaplotig	CDS	56741091	56741501	.	+	0	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 2349 2759 +
Chr2	stalkie_big_nohaplotig	CDS	56741558	56741707	.	+	0	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 2760 2909 +
Chr2	stalkie_big_nohaplotig	CDS	56741763	56741954	.	+	0	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 2910 3101 +
Chr2	stalkie_big_nohaplotig	CDS	56742020	56742139	.	+	0	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 3102 3221 +
Chr2	stalkie_big_nohaplotig	CDS	56742193	56742281	.	+	0	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 3222 3310 +
Chr2	stalkie_big_nohaplotig	CDS	56742337	56742505	.	+	1	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 3311 3479 +
Chr2	stalkie_big_nohaplotig	CDS	56742566	56743333	.	+	0	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 3480 4247 +
Chr2	stalkie_big_nohaplotig	CDS	56743417	56743646	.	+	0	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 4248 4477 +
Chr2	stalkie_big_nohaplotig	CDS	56743706	56744166	.	+	1	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 4478 4938 +
Chr2	stalkie_big_nohaplotig	CDS	56744226	56744602	.	+	2	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 4939 5315 +
Chr2	stalkie_big_nohaplotig	CDS	56744659	56745273	.	+	0	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 5316 5930 +
Chr2	stalkie_big_nohaplotig	CDS	56745344	56745519	.	+	0	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 5931 6106 +
Chr2	stalkie_big_nohaplotig	CDS	56745582	56746092	.	+	1	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 6107 6617 +
Chr2	stalkie_big_nohaplotig	CDS	56746428	56746751	.	+	0	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 6618 6941 +
Chr2	stalkie_big_nohaplotig	CDS	56746814	56746983	.	+	0	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 6942 7111 +
Chr2	stalkie_big_nohaplotig	CDS	56747045	56747252	.	+	1	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 7112 7319 +
Chr2	stalkie_big_nohaplotig	CDS	56747317	56747484	.	+	0	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 7320 7487 +
Chr2	stalkie_big_nohaplotig	CDS	56747540	56747662	.	+	0	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 7488 7610 +
Chr2	stalkie_big_nohaplotig	CDS	56747725	56747983	.	+	0	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 7611 7869 +
Chr2	stalkie_big_nohaplotig	CDS	56748067	56748182	.	+	2	Parent=comp161486_c0_seq1.mrna1;Target=comp161486_c0_seq1 7870 7985 +
Chr2	stalkie_big_nohaplotig	mRNA	56738666	56748179	.	+	.	ID=FBgn0015477.1.mrna1;geneID=FBgn0015477.1.path1;Name=FBgn0015477.1;Dir=sensecoverage=100.0;identity=99.8;matches=7215;mismatches=12;indels=0;unknowns=0;locus=RLOC_00017558
Chr2	stalkie_big_nohaplotig	exon	56738666	56738878	100	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 1 213 +
Chr2	stalkie_big_nohaplotig	exon	56739163	56739303	99	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 214 354 +
Chr2	stalkie_big_nohaplotig	exon	56739366	56739510	100	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 355 499 +
Chr2	stalkie_big_nohaplotig	exon	56739687	56739888	100	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 500 701 +
Chr2	stalkie_big_nohaplotig	exon	56739946	56740197	100	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 702 953 +
Chr2	stalkie_big_nohaplotig	exon	56740260	56740512	100	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 954 1206 +
Chr2	stalkie_big_nohaplotig	exon	56740577	56740755	100	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 1207 1385 +
Chr2	stalkie_big_nohaplotig	exon	56740824	56741031	100	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 1386 1593 +
Chr2	stalkie_big_nohaplotig	exon	56741091	56741501	100	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 1594 2004 +
Chr2	stalkie_big_nohaplotig	exon	56741558	56741707	100	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 2005 2154 +
Chr2	stalkie_big_nohaplotig	exon	56741763	56741954	99	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 2155 2346 +
Chr2	stalkie_big_nohaplotig	exon	56742020	56742139	100	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 2347 2466 +
Chr2	stalkie_big_nohaplotig	exon	56742193	56742281	100	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 2467 2555 +
Chr2	stalkie_big_nohaplotig	exon	56742337	56742505	100	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 2556 2724 +
Chr2	stalkie_big_nohaplotig	exon	56742566	56743333	99	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 2725 3492 +
Chr2	stalkie_big_nohaplotig	exon	56743417	56743646	100	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 3493 3722 +
Chr2	stalkie_big_nohaplotig	exon	56743706	56744166	99	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 3723 4183 +
Chr2	stalkie_big_nohaplotig	exon	56744226	56744602	100	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 4184 4560 +
Chr2	stalkie_big_nohaplotig	exon	56744659	56745273	99	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 4561 5175 +
Chr2	stalkie_big_nohaplotig	exon	56745344	56745519	100	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 5176 5351 +
Chr2	stalkie_big_nohaplotig	exon	56745582	56746092	99	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 5352 5862 +
Chr2	stalkie_big_nohaplotig	exon	56746428	56746751	100	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 5863 6186 +
Chr2	stalkie_big_nohaplotig	exon	56746814	56746983	100	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 6187 6356 +
Chr2	stalkie_big_nohaplotig	exon	56747045	56747252	100	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 6357 6564 +
Chr2	stalkie_big_nohaplotig	exon	56747317	56747484	100	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 6565 6732 +
Chr2	stalkie_big_nohaplotig	exon	56747540	56747662	100	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 6733 6855 +
Chr2	stalkie_big_nohaplotig	exon	56747725	56747983	99	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 6856 7114 +
Chr2	stalkie_big_nohaplotig	exon	56748067	56748179	100	+	.	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 7115 7227 +
Chr2	stalkie_big_nohaplotig	CDS	56738666	56738878	.	+	0	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 1 213 +
Chr2	stalkie_big_nohaplotig	CDS	56739163	56739303	.	+	0	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 214 354 +
Chr2	stalkie_big_nohaplotig	CDS	56739366	56739510	.	+	0	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 355 499 +
Chr2	stalkie_big_nohaplotig	CDS	56739687	56739888	.	+	2	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 500 701 +
Chr2	stalkie_big_nohaplotig	CDS	56739946	56740197	.	+	1	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 702 953 +
Chr2	stalkie_big_nohaplotig	CDS	56740260	56740512	.	+	1	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 954 1206 +
Chr2	stalkie_big_nohaplotig	CDS	56740577	56740755	.	+	0	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 1207 1385 +
Chr2	stalkie_big_nohaplotig	CDS	56740824	56741031	.	+	1	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 1386 1593 +
Chr2	stalkie_big_nohaplotig	CDS	56741091	56741501	.	+	0	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 1594 2004 +
Chr2	stalkie_big_nohaplotig	CDS	56741558	56741707	.	+	0	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 2005 2154 +
Chr2	stalkie_big_nohaplotig	CDS	56741763	56741954	.	+	0	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 2155 2346 +
Chr2	stalkie_big_nohaplotig	CDS	56742020	56742139	.	+	0	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 2347 2466 +
Chr2	stalkie_big_nohaplotig	CDS	56742193	56742281	.	+	0	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 2467 2555 +
Chr2	stalkie_big_nohaplotig	CDS	56742337	56742505	.	+	1	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 2556 2724 +
Chr2	stalkie_big_nohaplotig	CDS	56742566	56743333	.	+	0	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 2725 3492 +
Chr2	stalkie_big_nohaplotig	CDS	56743417	56743646	.	+	0	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 3493 3722 +
Chr2	stalkie_big_nohaplotig	CDS	56743706	56744166	.	+	1	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 3723 4183 +
Chr2	stalkie_big_nohaplotig	CDS	56744226	56744602	.	+	2	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 4184 4560 +
Chr2	stalkie_big_nohaplotig	CDS	56744659	56745273	.	+	0	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 4561 5175 +
Chr2	stalkie_big_nohaplotig	CDS	56745344	56745519	.	+	0	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 5176 5351 +
Chr2	stalkie_big_nohaplotig	CDS	56745582	56746092	.	+	1	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 5352 5862 +
Chr2	stalkie_big_nohaplotig	CDS	56746428	56746751	.	+	0	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 5863 6186 +
Chr2	stalkie_big_nohaplotig	CDS	56746814	56746983	.	+	0	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 6187 6356 +
Chr2	stalkie_big_nohaplotig	CDS	56747045	56747252	.	+	1	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 6357 6564 +
Chr2	stalkie_big_nohaplotig	CDS	56747317	56747484	.	+	0	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 6565 6732 +
Chr2	stalkie_big_nohaplotig	CDS	56747540	56747662	.	+	0	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 6733 6855 +
Chr2	stalkie_big_nohaplotig	CDS	56747725	56747983	.	+	0	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 6856 7114 +
Chr2	stalkie_big_nohaplotig	CDS	56748067	56748179	.	+	2	Parent=FBgn0015477.1.mrna1;Target=FBgn0015477.1 7115 7227 +
Chr2	gffcl	locus	56752775	56760054	.	+	.	ID=RLOC_00017559;geneIDs=FBgn0034795.1.path1;transcripts=FBgn0034795.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56752775	56760054	.	+	.	ID=FBgn0034795.1.mrna1;geneID=FBgn0034795.1.path1;Name=FBgn0034795.1;Dir=sensecoverage=100.0;identity=100.0;matches=4101;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017559
Chr2	stalkie_big_nohaplotig	exon	56752775	56752819	100	+	.	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 1 45 +
Chr2	stalkie_big_nohaplotig	exon	56752883	56752976	100	+	.	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 46 139 +
Chr2	stalkie_big_nohaplotig	exon	56753045	56753195	100	+	.	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 140 290 +
Chr2	stalkie_big_nohaplotig	exon	56753256	56753388	100	+	.	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 291 423 +
Chr2	stalkie_big_nohaplotig	exon	56753453	56753620	100	+	.	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 424 591 +
Chr2	stalkie_big_nohaplotig	exon	56753684	56754199	100	+	.	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 592 1107 +
Chr2	stalkie_big_nohaplotig	exon	56754262	56754348	100	+	.	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 1108 1194 +
Chr2	stalkie_big_nohaplotig	exon	56754403	56754504	100	+	.	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 1195 1296 +
Chr2	stalkie_big_nohaplotig	exon	56754562	56754662	100	+	.	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 1297 1397 +
Chr2	stalkie_big_nohaplotig	exon	56754726	56754971	100	+	.	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 1398 1643 +
Chr2	stalkie_big_nohaplotig	exon	56755043	56755170	100	+	.	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 1644 1771 +
Chr2	stalkie_big_nohaplotig	exon	56755972	56756146	100	+	.	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 1772 1946 +
Chr2	stalkie_big_nohaplotig	exon	56756210	56756385	100	+	.	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 1947 2122 +
Chr2	stalkie_big_nohaplotig	exon	56756445	56756757	100	+	.	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 2123 2435 +
Chr2	stalkie_big_nohaplotig	exon	56757014	56757337	100	+	.	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 2436 2759 +
Chr2	stalkie_big_nohaplotig	exon	56757399	56757622	100	+	.	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 2760 2983 +
Chr2	stalkie_big_nohaplotig	exon	56757685	56757767	100	+	.	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 2984 3066 +
Chr2	stalkie_big_nohaplotig	exon	56757832	56757979	100	+	.	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 3067 3214 +
Chr2	stalkie_big_nohaplotig	exon	56758057	56758501	100	+	.	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 3215 3659 +
Chr2	stalkie_big_nohaplotig	exon	56758563	56758775	100	+	.	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 3660 3872 +
Chr2	stalkie_big_nohaplotig	exon	56758837	56758977	100	+	.	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 3873 4013 +
Chr2	stalkie_big_nohaplotig	exon	56759967	56760054	100	+	.	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 4014 4101 +
Chr2	stalkie_big_nohaplotig	CDS	56752775	56752819	.	+	0	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 1 45 +
Chr2	stalkie_big_nohaplotig	CDS	56752883	56752976	.	+	0	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 46 139 +
Chr2	stalkie_big_nohaplotig	CDS	56753045	56753195	.	+	2	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 140 290 +
Chr2	stalkie_big_nohaplotig	CDS	56753256	56753388	.	+	1	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 291 423 +
Chr2	stalkie_big_nohaplotig	CDS	56753453	56753620	.	+	0	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 424 591 +
Chr2	stalkie_big_nohaplotig	CDS	56753684	56754199	.	+	0	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 592 1107 +
Chr2	stalkie_big_nohaplotig	CDS	56754262	56754348	.	+	0	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 1108 1194 +
Chr2	stalkie_big_nohaplotig	CDS	56754403	56754504	.	+	0	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 1195 1296 +
Chr2	stalkie_big_nohaplotig	CDS	56754562	56754662	.	+	0	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 1297 1397 +
Chr2	stalkie_big_nohaplotig	CDS	56754726	56754971	.	+	1	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 1398 1643 +
Chr2	stalkie_big_nohaplotig	CDS	56755043	56755170	.	+	1	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 1644 1771 +
Chr2	stalkie_big_nohaplotig	CDS	56755972	56756146	.	+	2	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 1772 1946 +
Chr2	stalkie_big_nohaplotig	CDS	56756210	56756385	.	+	1	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 1947 2122 +
Chr2	stalkie_big_nohaplotig	CDS	56756445	56756757	.	+	2	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 2123 2435 +
Chr2	stalkie_big_nohaplotig	CDS	56757014	56757337	.	+	1	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 2436 2759 +
Chr2	stalkie_big_nohaplotig	CDS	56757399	56757622	.	+	1	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 2760 2983 +
Chr2	stalkie_big_nohaplotig	CDS	56757685	56757767	.	+	2	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 2984 3066 +
Chr2	stalkie_big_nohaplotig	CDS	56757832	56757979	.	+	0	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 3067 3214 +
Chr2	stalkie_big_nohaplotig	CDS	56758057	56758501	.	+	2	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 3215 3659 +
Chr2	stalkie_big_nohaplotig	CDS	56758563	56758775	.	+	1	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 3660 3872 +
Chr2	stalkie_big_nohaplotig	CDS	56758837	56758977	.	+	1	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 3873 4013 +
Chr2	stalkie_big_nohaplotig	CDS	56759967	56760054	.	+	1	Parent=FBgn0034795.1.mrna1;Target=FBgn0034795.1 4014 4101 +
Chr2	gffcl	locus	56760190	56760510	.	+	.	ID=RLOC_00017560;geneIDs=comp168863_c0_seq1.path1;transcripts=comp168863_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56760190	56760510	.	+	.	ID=comp168863_c0_seq1.mrna1;geneID=comp168863_c0_seq1.path1;Name=comp168863_c0_seq1;Dir=indeterminatecoverage=97.6;identity=100.0;matches=321;mismatches=0;indels=0;unknowns=0;Target=comp168863_c0_seq1 321 1 .;CDS_Target=comp168863_c0_seq1 270 1 .;locus=RLOC_00017560
Chr2	stalkie_big_nohaplotig	exon	56760190	56760510	100	+	.	Parent=comp168863_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	56760190	56760459	.	+	0	Parent=comp168863_c0_seq1.mrna1
Chr2	gffcl	locus	56763114	56765004	.	+	.	ID=RLOC_00017561;geneIDs=FBgn0033526.1.path1;transcripts=FBgn0033526.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56763114	56765004	.	+	.	ID=FBgn0033526.1.mrna1;geneID=FBgn0033526.1.path1;Name=FBgn0033526.1;Dir=sensecoverage=99.4;identity=99.7;matches=1810;mismatches=6;indels=0;unknowns=0;locus=RLOC_00017561
Chr2	stalkie_big_nohaplotig	exon	56763114	56763781	99	+	.	Parent=FBgn0033526.1.mrna1;Target=FBgn0033526.1 1 668 +
Chr2	stalkie_big_nohaplotig	exon	56763857	56765004	99	+	.	Parent=FBgn0033526.1.mrna1;Target=FBgn0033526.1 669 1816 +
Chr2	stalkie_big_nohaplotig	CDS	56763114	56763781	.	+	0	Parent=FBgn0033526.1.mrna1;Target=FBgn0033526.1 1 668 +
Chr2	stalkie_big_nohaplotig	CDS	56763857	56765003	.	+	1	Parent=FBgn0033526.1.mrna1;Target=FBgn0033526.1 669 1815 +
Chr2	gffcl	locus	56766480	56767067	.	-	.	ID=RLOC_00017562;geneIDs=FBgn0010602.1.path1;transcripts=FBgn0010602.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56766480	56767067	.	-	.	ID=FBgn0010602.1.mrna1;geneID=FBgn0010602.1.path1;Name=FBgn0010602.1;Dir=sensecoverage=100.0;identity=99.2;matches=485;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017562
Chr2	stalkie_big_nohaplotig	exon	56766480	56766879	99	-	.	Parent=FBgn0010602.1.mrna1;Target=FBgn0010602.1 90 489 +
Chr2	stalkie_big_nohaplotig	exon	56766979	56767067	100	-	.	Parent=FBgn0010602.1.mrna1;Target=FBgn0010602.1 1 89 +
Chr2	stalkie_big_nohaplotig	CDS	56766480	56766879	.	-	1	Parent=FBgn0010602.1.mrna1;Target=FBgn0010602.1 90 489 +
Chr2	stalkie_big_nohaplotig	CDS	56766979	56767067	.	-	0	Parent=FBgn0010602.1.mrna1;Target=FBgn0010602.1 1 89 +
Chr2	gffcl	locus	56769107	56769344	.	+	.	ID=RLOC_00017563;geneIDs=comp1144290_c0_seq1.path1;transcripts=comp1144290_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56769107	56769344	.	+	.	ID=comp1144290_c0_seq1.mrna1;geneID=comp1144290_c0_seq1.path1;Name=comp1144290_c0_seq1;Dir=indeterminatecoverage=94.1;identity=100.0;matches=238;mismatches=0;indels=0;unknowns=0;Target=comp1144290_c0_seq1 239 2 .;CDS_Target=comp1144290_c0_seq1 79 2 .;locus=RLOC_00017563
Chr2	stalkie_big_nohaplotig	exon	56769107	56769344	100	+	.	Parent=comp1144290_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	56769107	56769184	.	+	0	Parent=comp1144290_c0_seq1.mrna1
Chr2	gffcl	locus	56770908	56771488	.	+	.	ID=RLOC_00017564;geneIDs=comp117208_c0_seq1.path1;transcripts=comp117208_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56770908	56771488	.	+	.	ID=comp117208_c0_seq1.mrna1;geneID=comp117208_c0_seq1.path1;Name=comp117208_c0_seq1;Dir=indeterminatecoverage=85.7;identity=99.8;matches=580;mismatches=0;indels=1;unknowns=0;Target=comp117208_c0_seq1 580 1 .;CDS_Target=comp117208_c0_seq1 580 409 .;locus=RLOC_00017564
Chr2	stalkie_big_nohaplotig	exon	56770908	56771488	99	+	.	Parent=comp117208_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	56771317	56771488	.	+	0	Parent=comp117208_c0_seq1.mrna1
Chr2	gffcl	locus	56775283	56845238	.	-	.	ID=RLOC_00017565;geneIDs=FBgn0001122.1.path1;transcripts=FBgn0001122.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56775283	56845238	.	-	.	ID=FBgn0001122.1.mrna1;geneID=FBgn0001122.1.path1;Name=FBgn0001122.1;Dir=sensecoverage=100.0;identity=100.0;matches=1098;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017565
Chr2	stalkie_big_nohaplotig	exon	56775283	56775467	100	-	.	Parent=FBgn0001122.1.mrna1;Target=FBgn0001122.1 914 1098 +
Chr2	stalkie_big_nohaplotig	exon	56777046	56777199	100	-	.	Parent=FBgn0001122.1.mrna1;Target=FBgn0001122.1 760 913 +
Chr2	stalkie_big_nohaplotig	exon	56777263	56777392	100	-	.	Parent=FBgn0001122.1.mrna1;Target=FBgn0001122.1 630 759 +
Chr2	stalkie_big_nohaplotig	exon	56777452	56777580	100	-	.	Parent=FBgn0001122.1.mrna1;Target=FBgn0001122.1 501 629 +
Chr2	stalkie_big_nohaplotig	exon	56824273	56824433	100	-	.	Parent=FBgn0001122.1.mrna1;Target=FBgn0001122.1 340 500 +
Chr2	stalkie_big_nohaplotig	exon	56824586	56824770	100	-	.	Parent=FBgn0001122.1.mrna1;Target=FBgn0001122.1 155 339 +
Chr2	stalkie_big_nohaplotig	exon	56845085	56845238	100	-	.	Parent=FBgn0001122.1.mrna1;Target=FBgn0001122.1 1 154 +
Chr2	stalkie_big_nohaplotig	CDS	56775283	56775467	.	-	2	Parent=FBgn0001122.1.mrna1;Target=FBgn0001122.1 914 1098 +
Chr2	stalkie_big_nohaplotig	CDS	56777046	56777199	.	-	0	Parent=FBgn0001122.1.mrna1;Target=FBgn0001122.1 760 913 +
Chr2	stalkie_big_nohaplotig	CDS	56777263	56777392	.	-	1	Parent=FBgn0001122.1.mrna1;Target=FBgn0001122.1 630 759 +
Chr2	stalkie_big_nohaplotig	CDS	56777452	56777580	.	-	1	Parent=FBgn0001122.1.mrna1;Target=FBgn0001122.1 501 629 +
Chr2	stalkie_big_nohaplotig	CDS	56824273	56824433	.	-	0	Parent=FBgn0001122.1.mrna1;Target=FBgn0001122.1 340 500 +
Chr2	stalkie_big_nohaplotig	CDS	56824586	56824770	.	-	2	Parent=FBgn0001122.1.mrna1;Target=FBgn0001122.1 155 339 +
Chr2	stalkie_big_nohaplotig	CDS	56845085	56845238	.	-	0	Parent=FBgn0001122.1.mrna1;Target=FBgn0001122.1 1 154 +
Chr2	gffcl	locus	56776891	58877400	.	.	.	ID=RLOC_00017566;geneIDs=FBgn0083919.1.path1,comp114146_c0_seq1.path1,comp133967_c0_seq1.path1,comp135430_c0_seq1.path1,comp136011_c0_seq1.path1,comp136675_c0_seq1.path1,comp152165_c0_seq1.path2,comp161734_c0_seq1.path1,comp162947_c0_seq1.path1,comp163524_c1_seq1.path1;transcripts=comp133967_c0_seq1.mrna1,comp161734_c0_seq1.mrna1,FBgn0083919.1.mrna1,comp136011_c0_seq1.mrna1,comp163524_c1_seq1.mrna1,comp162947_c0_seq1.mrna1,comp136675_c0_seq1.mrna1,comp114146_c0_seq1.mrna1,comp135430_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56776891	58737379	.	-	.	ID=comp133967_c0_seq1.mrna1;geneID=comp133967_c0_seq1.path1;Name=comp133967_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=708;mismatches=5;indels=0;unknowns=0;Target=comp133967_c0_seq1 602 531 .;locus=RLOC_00017566
Chr2	stalkie_big_nohaplotig	exon	56776891	56776913	95	-	.	Parent=comp133967_c0_seq1.mrna1;Target=comp133967_c0_seq1 713 691 .
Chr2	stalkie_big_nohaplotig	exon	56783519	56783521	100	-	.	Parent=comp133967_c0_seq1.mrna1;Target=comp133967_c0_seq1 690 688 .
Chr2	stalkie_big_nohaplotig	exon	56788423	56788425	100	-	.	Parent=comp133967_c0_seq1.mrna1;Target=comp133967_c0_seq1 687 685 .
Chr2	stalkie_big_nohaplotig	exon	56796511	56796518	100	-	.	Parent=comp133967_c0_seq1.mrna1;Target=comp133967_c0_seq1 684 677 .
Chr2	stalkie_big_nohaplotig	exon	56799468	56799473	100	-	.	Parent=comp133967_c0_seq1.mrna1;Target=comp133967_c0_seq1 676 671 .
Chr2	stalkie_big_nohaplotig	exon	56804488	56804499	100	-	.	Parent=comp133967_c0_seq1.mrna1;Target=comp133967_c0_seq1 670 659 .
Chr2	stalkie_big_nohaplotig	exon	56812241	56812245	100	-	.	Parent=comp133967_c0_seq1.mrna1;Target=comp133967_c0_seq1 658 654 .
Chr2	stalkie_big_nohaplotig	exon	56818772	56818779	75	-	.	Parent=comp133967_c0_seq1.mrna1;Target=comp133967_c0_seq1 653 646 .
Chr2	stalkie_big_nohaplotig	exon	56827401	56827402	100	-	.	Parent=comp133967_c0_seq1.mrna1;Target=comp133967_c0_seq1 645 644 .
Chr2	stalkie_big_nohaplotig	exon	58736737	58737379	99	-	.	Parent=comp133967_c0_seq1.mrna1;Target=comp133967_c0_seq1 643 1 .
Chr2	stalkie_big_nohaplotig	CDS	58736778	58736849	.	-	0	Parent=comp133967_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58722143	58869016	.	-	.	ID=comp161734_c0_seq1.mrna1;geneID=comp161734_c0_seq1.path1;Name=comp161734_c0_seq1;Dir=antisensecoverage=99.4;identity=99.6;matches=4687;mismatches=18;indels=2;unknowns=0;locus=RLOC_00017566
Chr2	stalkie_big_nohaplotig	exon	58722143	58722795	99	-	.	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 15 666 -
Chr2	stalkie_big_nohaplotig	exon	58722879	58723118	100	-	.	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 667 906 -
Chr2	stalkie_big_nohaplotig	exon	58724191	58724374	100	-	.	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 907 1090 -
Chr2	stalkie_big_nohaplotig	exon	58725792	58726059	100	-	.	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 1091 1358 -
Chr2	stalkie_big_nohaplotig	exon	58736512	58736667	100	-	.	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 1359 1514 -
Chr2	stalkie_big_nohaplotig	exon	58737359	58737533	100	-	.	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 1515 1689 -
Chr2	stalkie_big_nohaplotig	exon	58737794	58738726	99	-	.	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 1690 2622 -
Chr2	stalkie_big_nohaplotig	exon	58743892	58744000	99	-	.	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 2623 2731 -
Chr2	stalkie_big_nohaplotig	exon	58747970	58748164	98	-	.	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 2732 2926 -
Chr2	stalkie_big_nohaplotig	exon	58750754	58751159	100	-	.	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 2927 3332 -
Chr2	stalkie_big_nohaplotig	exon	58753508	58753602	98	-	.	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 3333 3427 -
Chr2	stalkie_big_nohaplotig	exon	58754747	58754880	100	-	.	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 3428 3561 -
Chr2	stalkie_big_nohaplotig	exon	58758141	58758303	100	-	.	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 3562 3724 -
Chr2	stalkie_big_nohaplotig	exon	58758364	58758515	99	-	.	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 3725 3876 -
Chr2	stalkie_big_nohaplotig	exon	58819271	58819409	99	-	.	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 3877 4015 -
Chr2	stalkie_big_nohaplotig	exon	58868104	58868400	100	-	.	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 4016 4312 -
Chr2	stalkie_big_nohaplotig	exon	58868610	58869016	99	-	.	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 4313 4720 -
Chr2	stalkie_big_nohaplotig	CDS	58722718	58722795	.	-	0	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 589 666 .
Chr2	stalkie_big_nohaplotig	CDS	58722879	58723118	.	-	0	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 667 906 .
Chr2	stalkie_big_nohaplotig	CDS	58724191	58724374	.	-	1	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 907 1090 .
Chr2	stalkie_big_nohaplotig	CDS	58725792	58726059	.	-	2	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 1091 1358 .
Chr2	stalkie_big_nohaplotig	CDS	58736512	58736667	.	-	2	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 1359 1514 .
Chr2	stalkie_big_nohaplotig	CDS	58737359	58737533	.	-	0	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 1515 1689 .
Chr2	stalkie_big_nohaplotig	CDS	58737794	58738726	.	-	0	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 1690 2622 .
Chr2	stalkie_big_nohaplotig	CDS	58743892	58744000	.	-	1	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 2623 2731 .
Chr2	stalkie_big_nohaplotig	CDS	58747970	58748164	.	-	1	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 2732 2926 .
Chr2	stalkie_big_nohaplotig	CDS	58750754	58751159	.	-	2	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 2927 3332 .
Chr2	stalkie_big_nohaplotig	CDS	58753508	58753602	.	-	1	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 3333 3427 .
Chr2	stalkie_big_nohaplotig	CDS	58754747	58754880	.	-	0	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 3428 3561 .
Chr2	stalkie_big_nohaplotig	CDS	58758141	58758303	.	-	1	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 3562 3724 .
Chr2	stalkie_big_nohaplotig	CDS	58758364	58758515	.	-	0	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 3725 3876 .
Chr2	stalkie_big_nohaplotig	CDS	58819271	58819381	.	-	0	Parent=comp161734_c0_seq1.mrna1;Target=comp161734_c0_seq1 3877 3987 .
Chr2	stalkie_big_nohaplotig	mRNA	58722721	58758515	.	-	.	ID=FBgn0083919.1.mrna1;geneID=FBgn0083919.1.path1;Name=FBgn0083919.1;Dir=sensecoverage=94.1;identity=99.4;matches=2007;mismatches=9;indels=3;unknowns=0;locus=RLOC_00017566
Chr2	stalkie_big_nohaplotig	exon	58722721	58722795	97	-	.	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 2071 2145 +
Chr2	stalkie_big_nohaplotig	exon	58722879	58723118	100	-	.	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 1831 2070 +
Chr2	stalkie_big_nohaplotig	exon	58724191	58724374	100	-	.	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 1647 1830 +
Chr2	stalkie_big_nohaplotig	exon	58725792	58725918	100	-	.	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 1520 1646 +
Chr2	stalkie_big_nohaplotig	exon	58736512	58736667	100	-	.	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 1364 1519 +
Chr2	stalkie_big_nohaplotig	exon	58737359	58737533	100	-	.	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 1189 1363 +
Chr2	stalkie_big_nohaplotig	exon	58743892	58744000	99	-	.	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 1080 1188 +
Chr2	stalkie_big_nohaplotig	exon	58747970	58748164	98	-	.	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 885 1079 +
Chr2	stalkie_big_nohaplotig	exon	58751667	58751877	98	-	.	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 671 884 +
Chr2	stalkie_big_nohaplotig	exon	58753508	58753602	98	-	.	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 576 670 +
Chr2	stalkie_big_nohaplotig	exon	58754747	58754880	100	-	.	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 442 575 +
Chr2	stalkie_big_nohaplotig	exon	58758141	58758303	100	-	.	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 279 441 +
Chr2	stalkie_big_nohaplotig	exon	58758364	58758515	99	-	.	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 127 278 +
Chr2	stalkie_big_nohaplotig	CDS	58722721	58722795	.	-	0	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 2071 2145 +
Chr2	stalkie_big_nohaplotig	CDS	58722879	58723118	.	-	0	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 1831 2070 +
Chr2	stalkie_big_nohaplotig	CDS	58724191	58724374	.	-	1	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 1647 1830 +
Chr2	stalkie_big_nohaplotig	CDS	58725792	58725918	.	-	2	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 1520 1646 +
Chr2	stalkie_big_nohaplotig	CDS	58736512	58736667	.	-	2	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 1364 1519 +
Chr2	stalkie_big_nohaplotig	CDS	58737359	58737533	.	-	0	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 1189 1363 +
Chr2	stalkie_big_nohaplotig	CDS	58743892	58744000	.	-	1	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 1080 1188 +
Chr2	stalkie_big_nohaplotig	CDS	58747970	58748164	.	-	1	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 885 1079 +
Chr2	stalkie_big_nohaplotig	CDS	58751667	58751877	.	-	2	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 671 884 +
Chr2	stalkie_big_nohaplotig	CDS	58753508	58753602	.	-	1	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 576 670 +
Chr2	stalkie_big_nohaplotig	CDS	58754747	58754880	.	-	0	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 442 575 +
Chr2	stalkie_big_nohaplotig	CDS	58758141	58758303	.	-	1	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 279 441 +
Chr2	stalkie_big_nohaplotig	CDS	58758364	58758515	.	-	0	Parent=FBgn0083919.1.mrna1;Target=FBgn0083919.1 127 278 +
Chr2	stalkie_big_nohaplotig	mRNA	58724354	58724574	.	-	.	ID=comp136011_c0_seq1.mrna1;geneID=comp136011_c0_seq1.path1;Name=comp136011_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.8;matches=214;mismatches=7;indels=0;unknowns=0;Target=comp136011_c0_seq1 221 1 .;CDS_Target=comp136011_c0_seq1 194 78 .;locus=RLOC_00017566
Chr2	stalkie_big_nohaplotig	exon	58724354	58724574	96	-	.	Parent=comp136011_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	58724381	58724497	.	-	0	Parent=comp136011_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58729718	58737380	.	-	.	ID=comp163524_c1_seq1.mrna1;geneID=comp163524_c1_seq1.path1;Name=comp163524_c1_seq1;Dir=sensecoverage=100.0;identity=97.1;matches=2978;mismatches=59;indels=31;unknowns=0;Target=comp163524_c1_seq1 2669 2716 +;locus=RLOC_00017566
Chr2	stalkie_big_nohaplotig	exon	58729718	58732732	97	-	.	Parent=comp163524_c1_seq1.mrna1;Target=comp163524_c1_seq1 23 3068 +
Chr2	stalkie_big_nohaplotig	exon	58737359	58737380	100	-	.	Parent=comp163524_c1_seq1.mrna1;Target=comp163524_c1_seq1 1 22 +
Chr2	stalkie_big_nohaplotig	CDS	58730070	58730116	.	-	0	Parent=comp163524_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58734165	58736532	.	-	.	ID=comp162947_c0_seq1.mrna1;geneID=comp162947_c0_seq1.path1;Name=comp162947_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.0;matches=2282;mismatches=81;indels=64;unknowns=0;Target=comp162947_c0_seq1 2422 1 .;CDS_Target=comp162947_c0_seq1 2034 1861 .;locus=RLOC_00017566
Chr2	stalkie_big_nohaplotig	exon	58734165	58736532	94	-	.	Parent=comp162947_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	58734534	58734707	.	-	0	Parent=comp162947_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58751139	58751689	.	-	.	ID=comp136675_c0_seq1.mrna1;geneID=comp136675_c0_seq1.path1;Name=comp136675_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=541;mismatches=5;indels=6;unknowns=0;Target=comp136675_c0_seq1 547 1 .;CDS_Target=comp136675_c0_seq1 198 115 .;locus=RLOC_00017566
Chr2	stalkie_big_nohaplotig	exon	58751139	58751689	98	-	.	Parent=comp136675_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	58751492	58751575	.	-	0	Parent=comp136675_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58753057	58753531	.	-	.	ID=comp114146_c0_seq1.mrna1;geneID=comp114146_c0_seq1.path1;Name=comp114146_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=469;mismatches=6;indels=0;unknowns=0;Target=comp114146_c0_seq1 475 1 .;CDS_Target=comp114146_c0_seq1 116 3 .;locus=RLOC_00017566
Chr2	stalkie_big_nohaplotig	exon	58753057	58753531	98	-	.	Parent=comp114146_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	58753416	58753529	.	-	0	Parent=comp114146_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58868379	58877400	.	-	.	ID=comp135430_c0_seq1.mrna1;geneID=comp135430_c0_seq1.path1;Name=comp135430_c0_seq1;Dir=antisensecoverage=100.0;identity=98.3;matches=357;mismatches=3;indels=3;unknowns=0;Target=comp135430_c0_seq1 80 361 .;locus=RLOC_00017566
Chr2	stalkie_big_nohaplotig	exon	58868379	58868400	100	-	.	Parent=comp135430_c0_seq1.mrna1;Target=comp135430_c0_seq1 1 22 -
Chr2	stalkie_big_nohaplotig	exon	58877061	58877400	98	-	.	Parent=comp135430_c0_seq1.mrna1;Target=comp135430_c0_seq1 23 361 -
Chr2	stalkie_big_nohaplotig	CDS	58877120	58877400	.	-	0	Parent=comp135430_c0_seq1.mrna1
Chr2	gffcl	locus	56780819	56781649	.	-	.	ID=RLOC_00017567;geneIDs=comp122537_c0_seq1.path1;transcripts=comp122537_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56780819	56781649	.	-	.	ID=comp122537_c0_seq1.mrna1;geneID=comp122537_c0_seq1.path1;Name=comp122537_c0_seq1;Dir=indeterminatecoverage=97.8;identity=99.4;matches=826;mismatches=5;indels=0;unknowns=0;Target=comp122537_c0_seq1 831 1 .;CDS_Target=comp122537_c0_seq1 700 161 .;locus=RLOC_00017567
Chr2	stalkie_big_nohaplotig	exon	56780819	56781649	99	-	.	Parent=comp122537_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	56780950	56781489	.	-	0	Parent=comp122537_c0_seq1.mrna1
Chr2	gffcl	locus	56781835	56782303	.	-	.	ID=RLOC_00017568;geneIDs=comp144722_c0_seq1.path1;transcripts=comp144722_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56781835	56782303	.	-	.	ID=comp144722_c0_seq1.mrna1;geneID=comp144722_c0_seq1.path1;Name=comp144722_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.1;matches=452;mismatches=8;indels=31;unknowns=0;Target=comp144722_c0_seq1 482 1 .;CDS_Target=comp144722_c0_seq1 221 204 .;locus=RLOC_00017568
Chr2	stalkie_big_nohaplotig	exon	56781835	56782303	92	-	.	Parent=comp144722_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	56782081	56782091	.	-	0	Parent=comp144722_c0_seq1.mrna1
Chr2	gffcl	locus	56790946	56791862	.	-	.	ID=RLOC_00017569;geneIDs=comp156171_c0_seq1.path1;transcripts=comp156171_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56790946	56791862	.	-	.	ID=comp156171_c0_seq1.mrna1;geneID=comp156171_c0_seq1.path1;Name=comp156171_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=910;mismatches=7;indels=0;unknowns=0;Target=comp156171_c0_seq1 917 1 .;CDS_Target=comp156171_c0_seq1 748 101 .;locus=RLOC_00017569
Chr2	stalkie_big_nohaplotig	exon	56790946	56791862	99	-	.	Parent=comp156171_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	56791115	56791762	.	-	0	Parent=comp156171_c0_seq1.mrna1
Chr2	gffcl	locus	56809649	56823800	.	+	.	ID=RLOC_00017570;geneIDs=FBgn0033524.1.path1;transcripts=FBgn0033524.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56809649	56823800	.	+	.	ID=FBgn0033524.1.mrna1;geneID=FBgn0033524.1.path1;Name=FBgn0033524.1;Dir=sensecoverage=100.0;identity=99.8;matches=614;mismatches=0;indels=1;unknowns=0;locus=RLOC_00017570
Chr2	stalkie_big_nohaplotig	exon	56809649	56809806	100	+	.	Parent=FBgn0033524.1.mrna1;Target=FBgn0033524.1 1 158 +
Chr2	stalkie_big_nohaplotig	exon	56809874	56809965	100	+	.	Parent=FBgn0033524.1.mrna1;Target=FBgn0033524.1 159 250 +
Chr2	stalkie_big_nohaplotig	exon	56812295	56812461	100	+	.	Parent=FBgn0033524.1.mrna1;Target=FBgn0033524.1 251 417 +
Chr2	stalkie_big_nohaplotig	exon	56823524	56823625	100	+	.	Parent=FBgn0033524.1.mrna1;Target=FBgn0033524.1 1304 1405 +
Chr2	stalkie_big_nohaplotig	exon	56823707	56823800	98	+	.	Parent=FBgn0033524.1.mrna1;Target=FBgn0033524.1 1406 1500 +
Chr2	stalkie_big_nohaplotig	CDS	56809649	56809806	.	+	0	Parent=FBgn0033524.1.mrna1;Target=FBgn0033524.1 1 158 +
Chr2	stalkie_big_nohaplotig	CDS	56809874	56809965	.	+	1	Parent=FBgn0033524.1.mrna1;Target=FBgn0033524.1 159 250 +
Chr2	stalkie_big_nohaplotig	CDS	56812295	56812461	.	+	2	Parent=FBgn0033524.1.mrna1;Target=FBgn0033524.1 251 417 +
Chr2	stalkie_big_nohaplotig	CDS	56823524	56823625	.	+	0	Parent=FBgn0033524.1.mrna1;Target=FBgn0033524.1 1304 1405 +
Chr2	stalkie_big_nohaplotig	CDS	56823707	56823800	.	+	0	Parent=FBgn0033524.1.mrna1;Target=FBgn0033524.1 1406 1500 +
Chr2	gffcl	locus	56849898	56850395	.	+	.	ID=RLOC_00017571;geneIDs=comp150451_c0_seq1.path1;transcripts=comp150451_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56849898	56850395	.	+	.	ID=comp150451_c0_seq1.mrna1;geneID=comp150451_c0_seq1.path1;Name=comp150451_c0_seq1;Dir=indeterminatecoverage=94.1;identity=99.8;matches=497;mismatches=1;indels=0;unknowns=0;Target=comp150451_c0_seq1 529 32 .;CDS_Target=comp150451_c0_seq1 110 33 .;locus=RLOC_00017571
Chr2	stalkie_big_nohaplotig	exon	56849898	56850395	99	+	.	Parent=comp150451_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	56849899	56849976	.	+	0	Parent=comp150451_c0_seq1.mrna1
Chr2	gffcl	locus	56850877	56863591	.	-	.	ID=RLOC_00017572;geneIDs=FBgn0262114.1.path1;transcripts=FBgn0262114.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56850877	56863591	.	-	.	ID=FBgn0262114.1.mrna1;geneID=FBgn0262114.1.path1;Name=FBgn0262114.1;Dir=sensecoverage=100.0;identity=100.0;matches=2171;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017572
Chr2	stalkie_big_nohaplotig	exon	56850877	56851010	100	-	.	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 2039 2172 +
Chr2	stalkie_big_nohaplotig	exon	56851098	56851209	100	-	.	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 1927 2038 +
Chr2	stalkie_big_nohaplotig	exon	56851279	56851415	99	-	.	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 1790 1926 +
Chr2	stalkie_big_nohaplotig	exon	56853457	56853513	100	-	.	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 1733 1789 +
Chr2	stalkie_big_nohaplotig	exon	56854315	56854439	100	-	.	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 1608 1732 +
Chr2	stalkie_big_nohaplotig	exon	56854987	56855159	100	-	.	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 1435 1607 +
Chr2	stalkie_big_nohaplotig	exon	56855229	56855380	100	-	.	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 1283 1434 +
Chr2	stalkie_big_nohaplotig	exon	56855444	56855556	100	-	.	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 1170 1282 +
Chr2	stalkie_big_nohaplotig	exon	56855632	56855819	100	-	.	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 982 1169 +
Chr2	stalkie_big_nohaplotig	exon	56855892	56856082	100	-	.	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 791 981 +
Chr2	stalkie_big_nohaplotig	exon	56856146	56856310	100	-	.	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 626 790 +
Chr2	stalkie_big_nohaplotig	exon	56861629	56862220	100	-	.	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 34 625 +
Chr2	stalkie_big_nohaplotig	exon	56863559	56863591	100	-	.	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 1 33 +
Chr2	stalkie_big_nohaplotig	CDS	56850877	56851010	.	-	2	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 2039 2172 +
Chr2	stalkie_big_nohaplotig	CDS	56851098	56851209	.	-	0	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 1927 2038 +
Chr2	stalkie_big_nohaplotig	CDS	56851279	56851415	.	-	2	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 1790 1926 +
Chr2	stalkie_big_nohaplotig	CDS	56853457	56853513	.	-	2	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 1733 1789 +
Chr2	stalkie_big_nohaplotig	CDS	56854315	56854439	.	-	1	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 1608 1732 +
Chr2	stalkie_big_nohaplotig	CDS	56854987	56855159	.	-	0	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 1435 1607 +
Chr2	stalkie_big_nohaplotig	CDS	56855229	56855380	.	-	2	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 1283 1434 +
Chr2	stalkie_big_nohaplotig	CDS	56855444	56855556	.	-	1	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 1170 1282 +
Chr2	stalkie_big_nohaplotig	CDS	56855632	56855819	.	-	0	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 982 1169 +
Chr2	stalkie_big_nohaplotig	CDS	56855892	56856082	.	-	2	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 791 981 +
Chr2	stalkie_big_nohaplotig	CDS	56856146	56856310	.	-	2	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 626 790 +
Chr2	stalkie_big_nohaplotig	CDS	56861629	56862220	.	-	0	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 34 625 +
Chr2	stalkie_big_nohaplotig	CDS	56863559	56863591	.	-	0	Parent=FBgn0262114.1.mrna1;Target=FBgn0262114.1 1 33 +
Chr2	gffcl	locus	56854315	57141004	.	.	.	ID=RLOC_00017573;geneIDs=comp149308_c1_seq1.path1,comp161506_c0_seq1.path1;transcripts=comp161506_c0_seq1.mrna1,comp149308_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56854315	57141004	.	+	.	ID=comp161506_c0_seq1.mrna1;geneID=comp161506_c0_seq1.path1;Name=comp161506_c0_seq1;Dir=indeterminatecoverage=77.2;identity=98.4;matches=2471;mismatches=23;indels=16;unknowns=0;locus=RLOC_00017573
Chr2	stalkie_big_nohaplotig	exon	56854315	56854441	98	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 127 1 .
Chr2	stalkie_big_nohaplotig	exon	56854989	56855161	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 300 128 .
Chr2	stalkie_big_nohaplotig	exon	56855231	56855380	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 450 301 .
Chr2	stalkie_big_nohaplotig	exon	56855444	56855556	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 563 451 .
Chr2	stalkie_big_nohaplotig	exon	56855632	56855819	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 751 564 .
Chr2	stalkie_big_nohaplotig	exon	56855892	56856082	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 942 752 .
Chr2	stalkie_big_nohaplotig	exon	56856146	56856310	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 1107 943 .
Chr2	stalkie_big_nohaplotig	exon	56861629	56862800	99	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2279 1108 .
Chr2	stalkie_big_nohaplotig	exon	56888842	56888847	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2285 2280 .
Chr2	stalkie_big_nohaplotig	exon	56909074	56909084	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2296 2286 .
Chr2	stalkie_big_nohaplotig	exon	56927625	56927629	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2345 2341 .
Chr2	stalkie_big_nohaplotig	exon	56931842	56931843	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2347 2346 .
Chr2	stalkie_big_nohaplotig	exon	56939093	56939104	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2359 2348 .
Chr2	stalkie_big_nohaplotig	exon	56962239	56962243	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2481 2477 .
Chr2	stalkie_big_nohaplotig	exon	56964559	56964562	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2485 2482 .
Chr2	stalkie_big_nohaplotig	exon	56964575	56964579	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2542 2538 .
Chr2	stalkie_big_nohaplotig	exon	56974915	56974926	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2554 2543 .
Chr2	stalkie_big_nohaplotig	exon	56997031	56997061	50	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2613 2580 .
Chr2	stalkie_big_nohaplotig	exon	57004292	57004297	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2619 2614 .
Chr2	stalkie_big_nohaplotig	exon	57019278	57019286	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2628 2620 .
Chr2	stalkie_big_nohaplotig	exon	57021267	57021275	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2637 2629 .
Chr2	stalkie_big_nohaplotig	exon	57028013	57028019	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2644 2638 .
Chr2	stalkie_big_nohaplotig	exon	57041869	57041872	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2648 2645 .
Chr2	stalkie_big_nohaplotig	exon	57073863	57073870	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2656 2649 .
Chr2	stalkie_big_nohaplotig	exon	57077170	57077200	57	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2779 2740 .
Chr2	stalkie_big_nohaplotig	exon	57079003	57079005	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2782 2780 .
Chr2	stalkie_big_nohaplotig	exon	57085979	57085987	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2866 2858 .
Chr2	stalkie_big_nohaplotig	exon	57110353	57110354	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2870 2869 .
Chr2	stalkie_big_nohaplotig	exon	57110375	57110382	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2924 2917 .
Chr2	stalkie_big_nohaplotig	exon	57114097	57114104	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2932 2925 .
Chr2	stalkie_big_nohaplotig	exon	57119970	57119973	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2946 2943 .
Chr2	stalkie_big_nohaplotig	exon	57137850	57137854	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2951 2947 .
Chr2	stalkie_big_nohaplotig	exon	57140999	57141004	100	+	.	Parent=comp161506_c0_seq1.mrna1;Target=comp161506_c0_seq1 2960 2955 .
Chr2	stalkie_big_nohaplotig	mRNA	56862796	56863203	.	-	.	ID=comp149308_c1_seq1.mrna1;geneID=comp149308_c1_seq1.path1;Name=comp149308_c1_seq1;Dir=indeterminatecoverage=95.6;identity=99.5;matches=406;mismatches=2;indels=0;unknowns=0;Target=comp149308_c1_seq1 427 20 .;CDS_Target=comp149308_c1_seq1 162 76 .;locus=RLOC_00017573
Chr2	stalkie_big_nohaplotig	exon	56862796	56863203	99	-	.	Parent=comp149308_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	56863061	56863147	.	-	0	Parent=comp149308_c1_seq1.mrna1
Chr2	gffcl	locus	56868921	56871176	.	+	.	ID=RLOC_00017574;geneIDs=comp159726_c1_seq1.path1;transcripts=comp159726_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56868921	56871176	.	+	.	ID=comp159726_c1_seq1.mrna1;geneID=comp159726_c1_seq1.path1;Name=comp159726_c1_seq1;Dir=antisensecoverage=98.7;identity=99.9;matches=1865;mismatches=1;indels=0;unknowns=0;Target=comp159726_c1_seq1 1553 1828 .;locus=RLOC_00017574
Chr2	stalkie_big_nohaplotig	exon	56868921	56868952	100	+	.	Parent=comp159726_c1_seq1.mrna1;Target=comp159726_c1_seq1 1835 1866 -
Chr2	stalkie_big_nohaplotig	exon	56869284	56869741	100	+	.	Parent=comp159726_c1_seq1.mrna1;Target=comp159726_c1_seq1 1377 1834 -
Chr2	stalkie_big_nohaplotig	exon	56869801	56871176	99	+	.	Parent=comp159726_c1_seq1.mrna1;Target=comp159726_c1_seq1 1 1376 -
Chr2	stalkie_big_nohaplotig	CDS	56869290	56869565	.	+	0	Parent=comp159726_c1_seq1.mrna1
Chr2	gffcl	locus	56872320	56880157	.	-	.	ID=RLOC_00017575;geneIDs=FBgn0033520.1.path1;transcripts=FBgn0033520.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56872320	56880157	.	-	.	ID=FBgn0033520.1.mrna1;geneID=FBgn0033520.1.path1;Name=FBgn0033520.1;Dir=sensecoverage=100.0;identity=99.7;matches=697;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017575
Chr2	stalkie_big_nohaplotig	exon	56872320	56872445	100	-	.	Parent=FBgn0033520.1.mrna1;Target=FBgn0033520.1 574 699 +
Chr2	stalkie_big_nohaplotig	exon	56878880	56878955	98	-	.	Parent=FBgn0033520.1.mrna1;Target=FBgn0033520.1 498 573 +
Chr2	stalkie_big_nohaplotig	exon	56879020	56879394	100	-	.	Parent=FBgn0033520.1.mrna1;Target=FBgn0033520.1 123 497 +
Chr2	stalkie_big_nohaplotig	exon	56880036	56880157	99	-	.	Parent=FBgn0033520.1.mrna1;Target=FBgn0033520.1 1 122 +
Chr2	stalkie_big_nohaplotig	CDS	56872320	56872445	.	-	0	Parent=FBgn0033520.1.mrna1;Target=FBgn0033520.1 574 699 +
Chr2	stalkie_big_nohaplotig	CDS	56878880	56878955	.	-	1	Parent=FBgn0033520.1.mrna1;Target=FBgn0033520.1 498 573 +
Chr2	stalkie_big_nohaplotig	CDS	56879020	56879394	.	-	1	Parent=FBgn0033520.1.mrna1;Target=FBgn0033520.1 123 497 +
Chr2	stalkie_big_nohaplotig	CDS	56880036	56880157	.	-	0	Parent=FBgn0033520.1.mrna1;Target=FBgn0033520.1 1 122 +
Chr2	gffcl	locus	56894703	56894962	.	+	.	ID=RLOC_00017576;geneIDs=comp896101_c0_seq1.path1;transcripts=comp896101_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56894703	56894962	.	+	.	ID=comp896101_c0_seq1.mrna1;geneID=comp896101_c0_seq1.path1;Name=comp896101_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=260;mismatches=0;indels=0;unknowns=0;Target=comp896101_c0_seq1 260 1 .;CDS_Target=comp896101_c0_seq1 193 95 .;locus=RLOC_00017576
Chr2	stalkie_big_nohaplotig	exon	56894703	56894962	100	+	.	Parent=comp896101_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	56894797	56894895	.	+	0	Parent=comp896101_c0_seq1.mrna1
Chr2	gffcl	locus	56968694	56970277	.	+	.	ID=RLOC_00017577;geneIDs=comp156464_c0_seq1.path1;transcripts=comp156464_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	56968694	56970277	.	+	.	ID=comp156464_c0_seq1.mrna1;geneID=comp156464_c0_seq1.path1;Name=comp156464_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.9;matches=1567;mismatches=17;indels=0;unknowns=0;Target=comp156464_c0_seq1 1587 4 .;CDS_Target=comp156464_c0_seq1 306 148 .;locus=RLOC_00017577
Chr2	stalkie_big_nohaplotig	exon	56968694	56970277	98	+	.	Parent=comp156464_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	56968838	56968996	.	+	0	Parent=comp156464_c0_seq1.mrna1
Chr2	gffcl	locus	57149170	57151096	.	-	.	ID=RLOC_00017578;geneIDs=comp158358_c0_seq1.path1;transcripts=comp158358_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57149170	57151096	.	-	.	ID=comp158358_c0_seq1.mrna1;geneID=comp158358_c0_seq1.path1;Name=comp158358_c0_seq1;Dir=sensecoverage=100.0;identity=98.6;matches=1149;mismatches=8;indels=8;unknowns=0;Target=comp158358_c0_seq1 1 162 +;locus=RLOC_00017578
Chr2	stalkie_big_nohaplotig	exon	57149170	57149499	96	-	.	Parent=comp158358_c0_seq1.mrna1;Target=comp158358_c0_seq1 829 1165 +
Chr2	stalkie_big_nohaplotig	exon	57149562	57149802	100	-	.	Parent=comp158358_c0_seq1.mrna1;Target=comp158358_c0_seq1 588 828 +
Chr2	stalkie_big_nohaplotig	exon	57149877	57150140	98	-	.	Parent=comp158358_c0_seq1.mrna1;Target=comp158358_c0_seq1 323 587 +
Chr2	stalkie_big_nohaplotig	exon	57150712	57150780	98	-	.	Parent=comp158358_c0_seq1.mrna1;Target=comp158358_c0_seq1 254 322 +
Chr2	stalkie_big_nohaplotig	exon	57150844	57151096	99	-	.	Parent=comp158358_c0_seq1.mrna1;Target=comp158358_c0_seq1 1 253 +
Chr2	stalkie_big_nohaplotig	CDS	57150935	57151096	.	-	0	Parent=comp158358_c0_seq1.mrna1
Chr2	gffcl	locus	57189788	59012340	.	-	.	ID=RLOC_00017580;geneIDs=comp149606_c1_seq1.path1;transcripts=comp149606_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57189788	59012340	.	-	.	ID=comp149606_c1_seq1.mrna1;geneID=comp149606_c1_seq1.path1;Name=comp149606_c1_seq1;Dir=indeterminatecoverage=65.6;identity=96.7;matches=350;mismatches=5;indels=7;unknowns=0;Target=comp149606_c1_seq1 192 1 .;locus=RLOC_00017580
Chr2	stalkie_big_nohaplotig	exon	57189788	57189794	100	-	.	Parent=comp149606_c1_seq1.mrna1;Target=comp149606_c1_seq1 356 350 .
Chr2	stalkie_big_nohaplotig	exon	57193778	57193784	100	-	.	Parent=comp149606_c1_seq1.mrna1;Target=comp149606_c1_seq1 349 343 .
Chr2	stalkie_big_nohaplotig	exon	57208624	57208625	100	-	.	Parent=comp149606_c1_seq1.mrna1;Target=comp149606_c1_seq1 341 340 .
Chr2	stalkie_big_nohaplotig	exon	57223336	57223345	100	-	.	Parent=comp149606_c1_seq1.mrna1;Target=comp149606_c1_seq1 339 330 .
Chr2	stalkie_big_nohaplotig	exon	57243300	57243303	100	-	.	Parent=comp149606_c1_seq1.mrna1;Target=comp149606_c1_seq1 329 326 .
Chr2	stalkie_big_nohaplotig	exon	57247268	57247269	100	-	.	Parent=comp149606_c1_seq1.mrna1;Target=comp149606_c1_seq1 325 324 .
Chr2	stalkie_big_nohaplotig	exon	57255475	57255485	100	-	.	Parent=comp149606_c1_seq1.mrna1;Target=comp149606_c1_seq1 323 313 .
Chr2	stalkie_big_nohaplotig	exon	59012022	59012340	96	-	.	Parent=comp149606_c1_seq1.mrna1;Target=comp149606_c1_seq1 312 1 .
Chr2	stalkie_big_nohaplotig	CDS	59012149	59012340	.	-	0	Parent=comp149606_c1_seq1.mrna1
Chr2	gffcl	locus	57255065	57826614	.	-	.	ID=RLOC_00017581;geneIDs=comp163948_c0_seq1.path1;transcripts=comp163948_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57255065	57826614	.	-	.	ID=comp163948_c0_seq1.mrna1;geneID=comp163948_c0_seq1.path1;Name=comp163948_c0_seq1;Dir=indeterminatecoverage=81.8;identity=97.0;matches=3297;mismatches=75;indels=28;unknowns=0;Target=comp163948_c0_seq1 3280 3104 .;locus=RLOC_00017581
Chr2	stalkie_big_nohaplotig	exon	57255065	57255422	95	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 4451 4094 .
Chr2	stalkie_big_nohaplotig	exon	57260826	57260835	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 4012 4003 .
Chr2	stalkie_big_nohaplotig	exon	57263889	57263890	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 4002 4001 .
Chr2	stalkie_big_nohaplotig	exon	57265004	57265074	66	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3928 3840 .
Chr2	stalkie_big_nohaplotig	exon	57271447	57271453	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3839 3833 .
Chr2	stalkie_big_nohaplotig	exon	57277930	57277937	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3832 3825 .
Chr2	stalkie_big_nohaplotig	exon	57279166	57279168	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3824 3822 .
Chr2	stalkie_big_nohaplotig	exon	57286518	57286523	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3821 3816 .
Chr2	stalkie_big_nohaplotig	exon	57288552	57288554	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3808 3806 .
Chr2	stalkie_big_nohaplotig	exon	57290912	57290914	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3805 3803 .
Chr2	stalkie_big_nohaplotig	exon	57299349	57299359	81	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3802 3792 .
Chr2	stalkie_big_nohaplotig	exon	57301486	57301490	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3791 3787 .
Chr2	stalkie_big_nohaplotig	exon	57301494	57301501	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3738 3731 .
Chr2	stalkie_big_nohaplotig	exon	57309367	57309371	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3730 3726 .
Chr2	stalkie_big_nohaplotig	exon	57317639	57317649	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3705 3695 .
Chr2	stalkie_big_nohaplotig	exon	57348376	57348387	91	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3694 3683 .
Chr2	stalkie_big_nohaplotig	exon	57356281	57356285	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3682 3678 .
Chr2	stalkie_big_nohaplotig	exon	57371602	57371606	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3677 3673 .
Chr2	stalkie_big_nohaplotig	exon	57387333	57387337	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3672 3668 .
Chr2	stalkie_big_nohaplotig	exon	57392029	57392031	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3667 3665 .
Chr2	stalkie_big_nohaplotig	exon	57397830	57397835	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3664 3659 .
Chr2	stalkie_big_nohaplotig	exon	57405150	57405151	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3658 3657 .
Chr2	stalkie_big_nohaplotig	exon	57411393	57411397	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3642 3638 .
Chr2	stalkie_big_nohaplotig	exon	57418514	57418517	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3636 3633 .
Chr2	stalkie_big_nohaplotig	exon	57419036	57419040	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3632 3628 .
Chr2	stalkie_big_nohaplotig	exon	57442831	57442832	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3627 3626 .
Chr2	stalkie_big_nohaplotig	exon	57450710	57450711	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3625 3624 .
Chr2	stalkie_big_nohaplotig	exon	57458059	57458061	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3623 3621 .
Chr2	stalkie_big_nohaplotig	exon	57461928	57464475	98	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 3620 1074 .
Chr2	stalkie_big_nohaplotig	exon	57467646	57467649	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 1073 1070 .
Chr2	stalkie_big_nohaplotig	exon	57471240	57471248	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 1062 1054 .
Chr2	stalkie_big_nohaplotig	exon	57477188	57477196	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 1018 1010 .
Chr2	stalkie_big_nohaplotig	exon	57483886	57483894	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 1005 997 .
Chr2	stalkie_big_nohaplotig	exon	57484013	57484019	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 996 990 .
Chr2	stalkie_big_nohaplotig	exon	57487732	57487735	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 989 986 .
Chr2	stalkie_big_nohaplotig	exon	57489865	57489872	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 985 978 .
Chr2	stalkie_big_nohaplotig	exon	57503775	57503778	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 977 974 .
Chr2	stalkie_big_nohaplotig	exon	57506959	57506968	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 940 931 .
Chr2	stalkie_big_nohaplotig	exon	57577758	57577761	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 930 927 .
Chr2	stalkie_big_nohaplotig	exon	57601324	57601329	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 926 921 .
Chr2	stalkie_big_nohaplotig	exon	57603400	57603410	90	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 920 910 .
Chr2	stalkie_big_nohaplotig	exon	57626749	57626757	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 858 850 .
Chr2	stalkie_big_nohaplotig	exon	57626771	57626778	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 834 827 .
Chr2	stalkie_big_nohaplotig	exon	57634298	57634301	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 826 823 .
Chr2	stalkie_big_nohaplotig	exon	57639328	57639341	78	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 822 809 .
Chr2	stalkie_big_nohaplotig	exon	57642227	57642254	60	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 808 790 .
Chr2	stalkie_big_nohaplotig	exon	57723712	57723718	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 789 783 .
Chr2	stalkie_big_nohaplotig	exon	57730917	57730920	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 782 779 .
Chr2	stalkie_big_nohaplotig	exon	57731704	57731708	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 778 774 .
Chr2	stalkie_big_nohaplotig	exon	57736550	57736556	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 773 767 .
Chr2	stalkie_big_nohaplotig	exon	57741478	57741479	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 766 765 .
Chr2	stalkie_big_nohaplotig	exon	57755392	57755395	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 764 761 .
Chr2	stalkie_big_nohaplotig	exon	57762516	57762519	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 760 757 .
Chr2	stalkie_big_nohaplotig	exon	57771663	57771688	80	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 756 731 .
Chr2	stalkie_big_nohaplotig	exon	57779107	57779108	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 730 729 .
Chr2	stalkie_big_nohaplotig	exon	57785160	57785164	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 728 724 .
Chr2	stalkie_big_nohaplotig	exon	57792223	57792226	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 714 711 .
Chr2	stalkie_big_nohaplotig	exon	57797421	57797430	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 710 701 .
Chr2	stalkie_big_nohaplotig	exon	57804823	57804824	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 700 699 .
Chr2	stalkie_big_nohaplotig	exon	57808218	57808219	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 698 697 .
Chr2	stalkie_big_nohaplotig	exon	57812707	57812710	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 696 693 .
Chr2	stalkie_big_nohaplotig	exon	57814519	57814525	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 692 686 .
Chr2	stalkie_big_nohaplotig	exon	57820436	57820441	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 685 680 .
Chr2	stalkie_big_nohaplotig	exon	57826606	57826614	100	-	.	Parent=comp163948_c0_seq1.mrna1;Target=comp163948_c0_seq1 663 655 .
Chr2	stalkie_big_nohaplotig	CDS	57462268	57462444	.	-	0	Parent=comp163948_c0_seq1.mrna1
Chr2	gffcl	locus	57266392	57267559	.	+	.	ID=RLOC_00017582;geneIDs=comp112914_c0_seq1.path1;transcripts=comp112914_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57266392	57267559	.	+	.	ID=comp112914_c0_seq1.mrna1;geneID=comp112914_c0_seq1.path1;Name=comp112914_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1167;mismatches=1;indels=0;unknowns=0;Target=comp112914_c0_seq1 1168 1 .;CDS_Target=comp112914_c0_seq1 625 503 .;locus=RLOC_00017582
Chr2	stalkie_big_nohaplotig	exon	57266392	57267559	99	+	.	Parent=comp112914_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	57266894	57267016	.	+	0	Parent=comp112914_c0_seq1.mrna1
Chr2	gffcl	locus	57300553	57302730	.	-	.	ID=RLOC_00017584;geneIDs=comp158923_c0_seq1.path1;transcripts=comp158923_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57300553	57302730	.	-	.	ID=comp158923_c0_seq1.mrna1;geneID=comp158923_c0_seq1.path1;Name=comp158923_c0_seq1;Dir=sensecoverage=100.0;identity=97.8;matches=1731;mismatches=9;indels=30;unknowns=0;Target=comp158923_c0_seq1 1289 1498 +;locus=RLOC_00017584
Chr2	stalkie_big_nohaplotig	exon	57300553	57301350	100	-	.	Parent=comp158923_c0_seq1.mrna1;Target=comp158923_c0_seq1 971 1768 +
Chr2	stalkie_big_nohaplotig	exon	57301611	57301787	100	-	.	Parent=comp158923_c0_seq1.mrna1;Target=comp158923_c0_seq1 794 970 +
Chr2	stalkie_big_nohaplotig	exon	57301840	57302056	86	-	.	Parent=comp158923_c0_seq1.mrna1;Target=comp158923_c0_seq1 551 793 +
Chr2	stalkie_big_nohaplotig	exon	57302181	57302730	98	-	.	Parent=comp158923_c0_seq1.mrna1;Target=comp158923_c0_seq1 1 550 +
Chr2	stalkie_big_nohaplotig	CDS	57300823	57301032	.	-	0	Parent=comp158923_c0_seq1.mrna1
Chr2	gffcl	locus	57340742	57341259	.	+	.	ID=RLOC_00017585;geneIDs=comp149467_c1_seq1.path1;transcripts=comp149467_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57340742	57341259	.	+	.	ID=comp149467_c1_seq1.mrna1;geneID=comp149467_c1_seq1.path1;Name=comp149467_c1_seq1;Dir=sensecoverage=96.7;identity=97.9;matches=428;mismatches=9;indels=0;unknowns=0;Target=comp149467_c1_seq1 17 106 +;locus=RLOC_00017585
Chr2	stalkie_big_nohaplotig	exon	57340742	57341133	97	+	.	Parent=comp149467_c1_seq1.mrna1;Target=comp149467_c1_seq1 16 407 +
Chr2	stalkie_big_nohaplotig	exon	57341215	57341259	97	+	.	Parent=comp149467_c1_seq1.mrna1;Target=comp149467_c1_seq1 408 452 +
Chr2	stalkie_big_nohaplotig	CDS	57340743	57340832	.	+	0	Parent=comp149467_c1_seq1.mrna1
Chr2	gffcl	locus	57498290	57499117	.	+	.	ID=RLOC_00017586;geneIDs=FBgn0000414.path1;transcripts=FBgn0000414.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57498290	57499117	.	+	.	ID=FBgn0000414.mrna1;geneID=FBgn0000414.path1;Name=FBgn0000414;Dir=sensecoverage=6.4;identity=100.0;matches=195;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017586
Chr2	stalkie_big_nohaplotig	exon	57498290	57498318	100	+	.	Parent=FBgn0000414.mrna1;Target=FBgn0000414 1 29 +
Chr2	stalkie_big_nohaplotig	exon	57498952	57499117	100	+	.	Parent=FBgn0000414.mrna1;Target=FBgn0000414 30 195 +
Chr2	stalkie_big_nohaplotig	CDS	57498290	57498318	.	+	0	Parent=FBgn0000414.mrna1;Target=FBgn0000414 1 29 +
Chr2	stalkie_big_nohaplotig	CDS	57498952	57499117	.	+	1	Parent=FBgn0000414.mrna1;Target=FBgn0000414 30 195 +
Chr2	gffcl	locus	57499121	57526470	.	+	.	ID=RLOC_00017587;geneIDs=FBgn0261698.1.path2;transcripts=FBgn0261698.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	57499121	57526470	.	+	.	ID=FBgn0261698.1.mrna2;geneID=FBgn0261698.1.path2;Name=FBgn0261698.1;Dir=sensecoverage=52.4;identity=100.0;matches=2354;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017587
Chr2	stalkie_big_nohaplotig	exon	57499121	57499157	100	+	.	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 2140 2176 +
Chr2	stalkie_big_nohaplotig	exon	57506176	57506454	100	+	.	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 2177 2455 +
Chr2	stalkie_big_nohaplotig	exon	57506578	57506728	100	+	.	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 2456 2606 +
Chr2	stalkie_big_nohaplotig	exon	57511467	57511572	100	+	.	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 2607 2712 +
Chr2	stalkie_big_nohaplotig	exon	57511661	57511876	100	+	.	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 2713 2928 +
Chr2	stalkie_big_nohaplotig	exon	57511946	57512109	100	+	.	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 2929 3092 +
Chr2	stalkie_big_nohaplotig	exon	57512183	57512294	100	+	.	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 3093 3204 +
Chr2	stalkie_big_nohaplotig	exon	57512414	57512599	100	+	.	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 3205 3390 +
Chr2	stalkie_big_nohaplotig	exon	57512678	57512884	100	+	.	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 3391 3597 +
Chr2	stalkie_big_nohaplotig	exon	57522571	57522776	100	+	.	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 3598 3803 +
Chr2	stalkie_big_nohaplotig	exon	57522847	57523053	100	+	.	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 3804 4010 +
Chr2	stalkie_big_nohaplotig	exon	57523123	57523168	100	+	.	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 4011 4056 +
Chr2	stalkie_big_nohaplotig	exon	57523954	57524142	100	+	.	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 4057 4245 +
Chr2	stalkie_big_nohaplotig	exon	57526222	57526470	99	+	.	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 4246 4494 +
Chr2	stalkie_big_nohaplotig	CDS	57499121	57499157	.	+	0	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 2140 2176 +
Chr2	stalkie_big_nohaplotig	CDS	57506176	57506454	.	+	2	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 2177 2455 +
Chr2	stalkie_big_nohaplotig	CDS	57506578	57506728	.	+	2	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 2456 2606 +
Chr2	stalkie_big_nohaplotig	CDS	57511467	57511572	.	+	1	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 2607 2712 +
Chr2	stalkie_big_nohaplotig	CDS	57511661	57511876	.	+	0	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 2713 2928 +
Chr2	stalkie_big_nohaplotig	CDS	57511946	57512109	.	+	0	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 2929 3092 +
Chr2	stalkie_big_nohaplotig	CDS	57512183	57512294	.	+	1	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 3093 3204 +
Chr2	stalkie_big_nohaplotig	CDS	57512414	57512599	.	+	0	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 3205 3390 +
Chr2	stalkie_big_nohaplotig	CDS	57512678	57512884	.	+	0	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 3391 3597 +
Chr2	stalkie_big_nohaplotig	CDS	57522571	57522776	.	+	0	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 3598 3803 +
Chr2	stalkie_big_nohaplotig	CDS	57522847	57523053	.	+	1	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 3804 4010 +
Chr2	stalkie_big_nohaplotig	CDS	57523123	57523168	.	+	1	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 4011 4056 +
Chr2	stalkie_big_nohaplotig	CDS	57523954	57524142	.	+	0	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 4057 4245 +
Chr2	stalkie_big_nohaplotig	CDS	57526222	57526470	.	+	0	Parent=FBgn0261698.1.mrna2;Target=FBgn0261698.1 4246 4494 +
Chr2	gffcl	locus	57527732	57528446	.	+	.	ID=RLOC_00017588;geneIDs=comp155224_c0_seq1.path1;transcripts=comp155224_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57527732	57528446	.	+	.	ID=comp155224_c0_seq1.mrna1;geneID=comp155224_c0_seq1.path1;Name=comp155224_c0_seq1;Dir=indeterminatecoverage=61.6;identity=96.2;matches=650;mismatches=11;indels=15;unknowns=0;locus=RLOC_00017588
Chr2	stalkie_big_nohaplotig	exon	57527732	57527839	84	+	.	Parent=comp155224_c0_seq1.mrna1;Target=comp155224_c0_seq1 93 1 .
Chr2	stalkie_big_nohaplotig	exon	57527879	57528446	98	+	.	Parent=comp155224_c0_seq1.mrna1;Target=comp155224_c0_seq1 674 107 .
Chr2	stalkie_big_nohaplotig	CDS	57527817	57527839	.	+	0	Parent=comp155224_c0_seq1.mrna1;Target=comp155224_c0_seq1 93 71 .
Chr2	stalkie_big_nohaplotig	CDS	57527879	57527965	.	+	1	Parent=comp155224_c0_seq1.mrna1;Target=comp155224_c0_seq1 193 107 .
Chr2	gffcl	locus	57529264	57530525	.	+	.	ID=RLOC_00017589;geneIDs=comp152597_c0_seq1.path1;transcripts=comp152597_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57529264	57530525	.	+	.	ID=comp152597_c0_seq1.mrna1;geneID=comp152597_c0_seq1.path1;Name=comp152597_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.5;matches=1256;mismatches=6;indels=0;unknowns=0;Target=comp152597_c0_seq1 1262 1 .;CDS_Target=comp152597_c0_seq1 1249 1145 .;locus=RLOC_00017589
Chr2	stalkie_big_nohaplotig	exon	57529264	57530525	99	+	.	Parent=comp152597_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	57530408	57530512	.	+	0	Parent=comp152597_c0_seq1.mrna1
Chr2	gffcl	locus	57552987	57554200	.	-	.	ID=RLOC_00017591;geneIDs=comp135095_c0_seq1.path1;transcripts=comp135095_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57552987	57554200	.	-	.	ID=comp135095_c0_seq1.mrna1;geneID=comp135095_c0_seq1.path1;Name=comp135095_c0_seq1;Dir=sensecoverage=99.9;identity=97.7;matches=847;mismatches=7;indels=13;unknowns=0;locus=RLOC_00017591
Chr2	stalkie_big_nohaplotig	exon	57552987	57553201	99	-	.	Parent=comp135095_c0_seq1.mrna1;Target=comp135095_c0_seq1 653 866 +
Chr2	stalkie_big_nohaplotig	exon	57553330	57553714	99	-	.	Parent=comp135095_c0_seq1.mrna1;Target=comp135095_c0_seq1 268 652 +
Chr2	stalkie_big_nohaplotig	exon	57553780	57553824	97	-	.	Parent=comp135095_c0_seq1.mrna1;Target=comp135095_c0_seq1 223 267 +
Chr2	stalkie_big_nohaplotig	exon	57553991	57554200	92	-	.	Parent=comp135095_c0_seq1.mrna1;Target=comp135095_c0_seq1 1 222 +
Chr2	stalkie_big_nohaplotig	CDS	57553682	57553714	.	-	0	Parent=comp135095_c0_seq1.mrna1;Target=comp135095_c0_seq1 268 300 +
Chr2	stalkie_big_nohaplotig	CDS	57553780	57553824	.	-	0	Parent=comp135095_c0_seq1.mrna1;Target=comp135095_c0_seq1 223 267 +
Chr2	stalkie_big_nohaplotig	CDS	57553991	57554092	.	-	0	Parent=comp135095_c0_seq1.mrna1;Target=comp135095_c0_seq1 121 222 +
Chr2	gffcl	locus	57568827	57570011	.	-	.	ID=RLOC_00017592;geneIDs=comp150615_c0_seq1.path1;transcripts=comp150615_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57568827	57570011	.	-	.	ID=comp150615_c0_seq1.mrna1;geneID=comp150615_c0_seq1.path1;Name=comp150615_c0_seq1;Dir=sensecoverage=98.6;identity=96.5;matches=1067;mismatches=27;indels=12;unknowns=0;Target=comp150615_c0_seq1 666 788 +;locus=RLOC_00017592
Chr2	stalkie_big_nohaplotig	exon	57568827	57569482	95	-	.	Parent=comp150615_c0_seq1.mrna1;Target=comp150615_c0_seq1 458 1107 +
Chr2	stalkie_big_nohaplotig	exon	57569563	57570011	97	-	.	Parent=comp150615_c0_seq1.mrna1;Target=comp150615_c0_seq1 13 457 +
Chr2	stalkie_big_nohaplotig	CDS	57569152	57569274	.	-	0	Parent=comp150615_c0_seq1.mrna1
Chr2	gffcl	locus	57606932	57607646	.	+	.	ID=RLOC_00017593;geneIDs=comp155224_c0_seq1.path2;transcripts=comp155224_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	57606932	57607646	.	+	.	ID=comp155224_c0_seq1.mrna2;geneID=comp155224_c0_seq1.path2;Name=comp155224_c0_seq1;Dir=indeterminatecoverage=61.6;identity=96.2;matches=650;mismatches=11;indels=15;unknowns=0;locus=RLOC_00017593
Chr2	stalkie_big_nohaplotig	exon	57606932	57607039	84	+	.	Parent=comp155224_c0_seq1.mrna2;Target=comp155224_c0_seq1 93 1 .
Chr2	stalkie_big_nohaplotig	exon	57607079	57607646	98	+	.	Parent=comp155224_c0_seq1.mrna2;Target=comp155224_c0_seq1 674 107 .
Chr2	stalkie_big_nohaplotig	CDS	57607017	57607039	.	+	0	Parent=comp155224_c0_seq1.mrna2;Target=comp155224_c0_seq1 93 71 .
Chr2	stalkie_big_nohaplotig	CDS	57607079	57607165	.	+	1	Parent=comp155224_c0_seq1.mrna2;Target=comp155224_c0_seq1 193 107 .
Chr2	gffcl	locus	57608464	57609725	.	+	.	ID=RLOC_00017594;geneIDs=comp152597_c0_seq1.path2;transcripts=comp152597_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	57608464	57609725	.	+	.	ID=comp152597_c0_seq1.mrna2;geneID=comp152597_c0_seq1.path2;Name=comp152597_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.5;matches=1256;mismatches=6;indels=0;unknowns=0;Target=comp152597_c0_seq1 1262 1 .;CDS_Target=comp152597_c0_seq1 1249 1145 .;locus=RLOC_00017594
Chr2	stalkie_big_nohaplotig	exon	57608464	57609725	99	+	.	Parent=comp152597_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	57609608	57609712	.	+	0	Parent=comp152597_c0_seq1.mrna2
Chr2	gffcl	locus	57615676	57631323	.	-	.	ID=RLOC_00017595;geneIDs=FBgn0026403.path1,comp159647_c0_seq1.path1;transcripts=FBgn0026403.mrna1,comp159647_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57615676	57630667	.	-	.	ID=FBgn0026403.mrna1;geneID=FBgn0026403.path1;Name=FBgn0026403;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2003;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017595
Chr2	stalkie_big_nohaplotig	exon	57615676	57617001	99	-	.	Parent=FBgn0026403.mrna1;Target=FBgn0026403 2004 679 .
Chr2	stalkie_big_nohaplotig	exon	57617059	57617235	100	-	.	Parent=FBgn0026403.mrna1;Target=FBgn0026403 678 502 .
Chr2	stalkie_big_nohaplotig	exon	57617895	57618197	100	-	.	Parent=FBgn0026403.mrna1;Target=FBgn0026403 501 199 .
Chr2	stalkie_big_nohaplotig	exon	57630342	57630519	100	-	.	Parent=FBgn0026403.mrna1;Target=FBgn0026403 198 21 .
Chr2	stalkie_big_nohaplotig	exon	57630648	57630667	100	-	.	Parent=FBgn0026403.mrna1;Target=FBgn0026403 20 1 .
Chr2	stalkie_big_nohaplotig	CDS	57615676	57617001	.	-	0	Parent=FBgn0026403.mrna1;Target=FBgn0026403 2004 679 .
Chr2	stalkie_big_nohaplotig	CDS	57617059	57617235	.	-	0	Parent=FBgn0026403.mrna1;Target=FBgn0026403 678 502 .
Chr2	stalkie_big_nohaplotig	CDS	57617895	57618197	.	-	0	Parent=FBgn0026403.mrna1;Target=FBgn0026403 501 199 .
Chr2	stalkie_big_nohaplotig	CDS	57630342	57630519	.	-	1	Parent=FBgn0026403.mrna1;Target=FBgn0026403 198 21 .
Chr2	stalkie_big_nohaplotig	CDS	57630648	57630667	.	-	0	Parent=FBgn0026403.mrna1;Target=FBgn0026403 20 1 .
Chr2	stalkie_big_nohaplotig	mRNA	57615676	57631323	.	-	.	ID=comp159647_c0_seq1.mrna1;geneID=comp159647_c0_seq1.path1;Name=comp159647_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=2728;mismatches=6;indels=0;unknowns=0;locus=RLOC_00017595
Chr2	stalkie_big_nohaplotig	exon	57615676	57617001	99	-	.	Parent=comp159647_c0_seq1.mrna1;Target=comp159647_c0_seq1 2734 1409 .
Chr2	stalkie_big_nohaplotig	exon	57617059	57617235	100	-	.	Parent=comp159647_c0_seq1.mrna1;Target=comp159647_c0_seq1 1408 1232 .
Chr2	stalkie_big_nohaplotig	exon	57617895	57618197	100	-	.	Parent=comp159647_c0_seq1.mrna1;Target=comp159647_c0_seq1 1231 929 .
Chr2	stalkie_big_nohaplotig	exon	57630342	57630885	100	-	.	Parent=comp159647_c0_seq1.mrna1;Target=comp159647_c0_seq1 928 385 .
Chr2	stalkie_big_nohaplotig	exon	57630940	57631323	98	-	.	Parent=comp159647_c0_seq1.mrna1;Target=comp159647_c0_seq1 384 1 .
Chr2	stalkie_big_nohaplotig	CDS	57615676	57617001	.	-	0	Parent=comp159647_c0_seq1.mrna1;Target=comp159647_c0_seq1 2734 1409 .
Chr2	stalkie_big_nohaplotig	CDS	57617059	57617235	.	-	0	Parent=comp159647_c0_seq1.mrna1;Target=comp159647_c0_seq1 1408 1232 .
Chr2	stalkie_big_nohaplotig	CDS	57617895	57618197	.	-	0	Parent=comp159647_c0_seq1.mrna1;Target=comp159647_c0_seq1 1231 929 .
Chr2	stalkie_big_nohaplotig	CDS	57630342	57630569	.	-	0	Parent=comp159647_c0_seq1.mrna1;Target=comp159647_c0_seq1 928 701 .
Chr2	gffcl	locus	57633307	57634393	.	+	.	ID=RLOC_00017596;geneIDs=comp139645_c0_seq1.path1;transcripts=comp139645_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57633307	57634393	.	+	.	ID=comp139645_c0_seq1.mrna1;geneID=comp139645_c0_seq1.path1;Name=comp139645_c0_seq1;Dir=indeterminatecoverage=97.7;identity=97.8;matches=989;mismatches=14;indels=8;unknowns=0;Target=comp139645_c0_seq1 890 801 .;locus=RLOC_00017596
Chr2	stalkie_big_nohaplotig	exon	57633307	57633526	93	+	.	Parent=comp139645_c0_seq1.mrna1;Target=comp139645_c0_seq1 251 25 .
Chr2	stalkie_big_nohaplotig	exon	57633611	57634393	99	+	.	Parent=comp139645_c0_seq1.mrna1;Target=comp139645_c0_seq1 1048 265 .
Chr2	stalkie_big_nohaplotig	CDS	57634147	57634235	.	+	0	Parent=comp139645_c0_seq1.mrna1
Chr2	gffcl	locus	57642629	57651327	.	-	.	ID=RLOC_00017597;geneIDs=FBgn0020370.1.path1;transcripts=FBgn0020370.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57642629	57651327	.	-	.	ID=FBgn0020370.1.mrna1;geneID=FBgn0020370.1.path1;Name=FBgn0020370.1;Dir=sensecoverage=100.0;identity=99.6;matches=3369;mismatches=2;indels=12;unknowns=0;locus=RLOC_00017597
Chr2	stalkie_big_nohaplotig	exon	57642629	57643526	98	-	.	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 2486 3371 +
Chr2	stalkie_big_nohaplotig	exon	57643593	57643704	100	-	.	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 2374 2485 +
Chr2	stalkie_big_nohaplotig	exon	57644312	57644475	100	-	.	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 2210 2373 +
Chr2	stalkie_big_nohaplotig	exon	57644543	57644745	100	-	.	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 2007 2209 +
Chr2	stalkie_big_nohaplotig	exon	57644812	57644968	100	-	.	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 1850 2006 +
Chr2	stalkie_big_nohaplotig	exon	57645041	57645162	100	-	.	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 1728 1849 +
Chr2	stalkie_big_nohaplotig	exon	57645246	57645435	100	-	.	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 1538 1727 +
Chr2	stalkie_big_nohaplotig	exon	57645512	57645745	100	-	.	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 1304 1537 +
Chr2	stalkie_big_nohaplotig	exon	57647867	57647997	100	-	.	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 1173 1303 +
Chr2	stalkie_big_nohaplotig	exon	57649040	57649283	100	-	.	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 929 1172 +
Chr2	stalkie_big_nohaplotig	exon	57649349	57649481	100	-	.	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 796 928 +
Chr2	stalkie_big_nohaplotig	exon	57649540	57649709	100	-	.	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 626 795 +
Chr2	stalkie_big_nohaplotig	exon	57649761	57649959	100	-	.	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 427 625 +
Chr2	stalkie_big_nohaplotig	exon	57650839	57650973	100	-	.	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 292 426 +
Chr2	stalkie_big_nohaplotig	exon	57651037	57651327	100	-	.	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 1 291 +
Chr2	stalkie_big_nohaplotig	CDS	57642631	57643526	.	-	2	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 2486 3369 +
Chr2	stalkie_big_nohaplotig	CDS	57643593	57643704	.	-	0	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 2374 2485 +
Chr2	stalkie_big_nohaplotig	CDS	57644312	57644475	.	-	2	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 2210 2373 +
Chr2	stalkie_big_nohaplotig	CDS	57644543	57644745	.	-	1	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 2007 2209 +
Chr2	stalkie_big_nohaplotig	CDS	57644812	57644968	.	-	2	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 1850 2006 +
Chr2	stalkie_big_nohaplotig	CDS	57645041	57645162	.	-	1	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 1728 1849 +
Chr2	stalkie_big_nohaplotig	CDS	57645246	57645435	.	-	2	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 1538 1727 +
Chr2	stalkie_big_nohaplotig	CDS	57645512	57645745	.	-	2	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 1304 1537 +
Chr2	stalkie_big_nohaplotig	CDS	57647867	57647997	.	-	1	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 1173 1303 +
Chr2	stalkie_big_nohaplotig	CDS	57649040	57649283	.	-	2	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 929 1172 +
Chr2	stalkie_big_nohaplotig	CDS	57649349	57649481	.	-	0	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 796 928 +
Chr2	stalkie_big_nohaplotig	CDS	57649540	57649709	.	-	2	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 626 795 +
Chr2	stalkie_big_nohaplotig	CDS	57649761	57649959	.	-	0	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 427 625 +
Chr2	stalkie_big_nohaplotig	CDS	57650839	57650973	.	-	0	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 292 426 +
Chr2	stalkie_big_nohaplotig	CDS	57651037	57651327	.	-	0	Parent=FBgn0020370.1.mrna1;Target=FBgn0020370.1 1 291 +
Chr2	gffcl	locus	57654337	57657579	.	+	.	ID=RLOC_00017598;geneIDs=FBgn0085468.1.path1;transcripts=FBgn0085468.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57654337	57657579	.	+	.	ID=FBgn0085468.1.mrna1;geneID=FBgn0085468.1.path1;Name=FBgn0085468.1;Dir=sensecoverage=100.0;identity=100.0;matches=231;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017598
Chr2	stalkie_big_nohaplotig	exon	57654337	57654447	100	+	.	Parent=FBgn0085468.1.mrna1;Target=FBgn0085468.1 1 111 +
Chr2	stalkie_big_nohaplotig	exon	57654631	57654717	100	+	.	Parent=FBgn0085468.1.mrna1;Target=FBgn0085468.1 112 198 +
Chr2	stalkie_big_nohaplotig	exon	57657547	57657579	100	+	.	Parent=FBgn0085468.1.mrna1;Target=FBgn0085468.1 199 231 +
Chr2	stalkie_big_nohaplotig	CDS	57654337	57654447	.	+	0	Parent=FBgn0085468.1.mrna1;Target=FBgn0085468.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	57654631	57654717	.	+	0	Parent=FBgn0085468.1.mrna1;Target=FBgn0085468.1 112 198 +
Chr2	stalkie_big_nohaplotig	CDS	57657547	57657579	.	+	0	Parent=FBgn0085468.1.mrna1;Target=FBgn0085468.1 199 231 +
Chr2	gffcl	locus	57658137	57661378	.	+	.	ID=RLOC_00017599;geneIDs=FBgn0020391.1.path1;transcripts=FBgn0020391.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57658137	57661378	.	+	.	ID=FBgn0020391.1.mrna1;geneID=FBgn0020391.1.path1;Name=FBgn0020391.1;Dir=sensecoverage=100.0;identity=99.8;matches=2110;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017599
Chr2	stalkie_big_nohaplotig	exon	57658137	57658487	100	+	.	Parent=FBgn0020391.1.mrna1;Target=FBgn0020391.1 1 351 +
Chr2	stalkie_big_nohaplotig	exon	57658566	57658845	100	+	.	Parent=FBgn0020391.1.mrna1;Target=FBgn0020391.1 352 631 +
Chr2	stalkie_big_nohaplotig	exon	57658914	57659156	99	+	.	Parent=FBgn0020391.1.mrna1;Target=FBgn0020391.1 632 874 +
Chr2	stalkie_big_nohaplotig	exon	57659213	57659652	99	+	.	Parent=FBgn0020391.1.mrna1;Target=FBgn0020391.1 875 1314 +
Chr2	stalkie_big_nohaplotig	exon	57660578	57661378	99	+	.	Parent=FBgn0020391.1.mrna1;Target=FBgn0020391.1 1315 2115 +
Chr2	stalkie_big_nohaplotig	CDS	57658137	57658487	.	+	0	Parent=FBgn0020391.1.mrna1;Target=FBgn0020391.1 1 351 +
Chr2	stalkie_big_nohaplotig	CDS	57658566	57658845	.	+	0	Parent=FBgn0020391.1.mrna1;Target=FBgn0020391.1 352 631 +
Chr2	stalkie_big_nohaplotig	CDS	57658914	57659156	.	+	2	Parent=FBgn0020391.1.mrna1;Target=FBgn0020391.1 632 874 +
Chr2	stalkie_big_nohaplotig	CDS	57659213	57659652	.	+	2	Parent=FBgn0020391.1.mrna1;Target=FBgn0020391.1 875 1314 +
Chr2	stalkie_big_nohaplotig	CDS	57660578	57661378	.	+	0	Parent=FBgn0020391.1.mrna1;Target=FBgn0020391.1 1315 2115 +
Chr2	gffcl	locus	57662126	57663026	.	-	.	ID=RLOC_00017600;geneIDs=comp152328_c0_seq1.path1;transcripts=comp152328_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57662126	57663026	.	-	.	ID=comp152328_c0_seq1.mrna1;geneID=comp152328_c0_seq1.path1;Name=comp152328_c0_seq1;Dir=antisensecoverage=100.0;identity=97.2;matches=737;mismatches=20;indels=1;unknowns=0;locus=RLOC_00017600
Chr2	stalkie_big_nohaplotig	exon	57662126	57662441	97	-	.	Parent=comp152328_c0_seq1.mrna1;Target=comp152328_c0_seq1 1 317 -
Chr2	stalkie_big_nohaplotig	exon	57662507	57662518	100	-	.	Parent=comp152328_c0_seq1.mrna1;Target=comp152328_c0_seq1 318 329 -
Chr2	stalkie_big_nohaplotig	exon	57662577	57662651	94	-	.	Parent=comp152328_c0_seq1.mrna1;Target=comp152328_c0_seq1 330 404 -
Chr2	stalkie_big_nohaplotig	exon	57662673	57663026	97	-	.	Parent=comp152328_c0_seq1.mrna1;Target=comp152328_c0_seq1 405 758 -
Chr2	stalkie_big_nohaplotig	CDS	57662296	57662441	.	-	2	Parent=comp152328_c0_seq1.mrna1;Target=comp152328_c0_seq1 172 317 .
Chr2	stalkie_big_nohaplotig	CDS	57662507	57662518	.	-	2	Parent=comp152328_c0_seq1.mrna1;Target=comp152328_c0_seq1 318 329 .
Chr2	stalkie_big_nohaplotig	CDS	57662577	57662651	.	-	2	Parent=comp152328_c0_seq1.mrna1;Target=comp152328_c0_seq1 330 404 .
Chr2	stalkie_big_nohaplotig	CDS	57662673	57662829	.	-	0	Parent=comp152328_c0_seq1.mrna1;Target=comp152328_c0_seq1 405 561 .
Chr2	gffcl	locus	57665360	57683942	.	-	.	ID=RLOC_00017601;geneIDs=FBgn0033799.1.path1;transcripts=FBgn0033799.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57665360	57683942	.	-	.	ID=FBgn0033799.1.mrna1;geneID=FBgn0033799.1.path1;Name=FBgn0033799.1;Dir=sensecoverage=100.0;identity=99.7;matches=646;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017601
Chr2	stalkie_big_nohaplotig	exon	57665360	57665629	99	-	.	Parent=FBgn0033799.1.mrna1;Target=FBgn0033799.1 379 648 +
Chr2	stalkie_big_nohaplotig	exon	57665733	57665805	100	-	.	Parent=FBgn0033799.1.mrna1;Target=FBgn0033799.1 306 378 +
Chr2	stalkie_big_nohaplotig	exon	57665862	57666016	100	-	.	Parent=FBgn0033799.1.mrna1;Target=FBgn0033799.1 151 305 +
Chr2	stalkie_big_nohaplotig	exon	57683793	57683942	100	-	.	Parent=FBgn0033799.1.mrna1;Target=FBgn0033799.1 1 150 +
Chr2	stalkie_big_nohaplotig	CDS	57665360	57665629	.	-	0	Parent=FBgn0033799.1.mrna1;Target=FBgn0033799.1 379 648 +
Chr2	stalkie_big_nohaplotig	CDS	57665733	57665805	.	-	1	Parent=FBgn0033799.1.mrna1;Target=FBgn0033799.1 306 378 +
Chr2	stalkie_big_nohaplotig	CDS	57665862	57666016	.	-	0	Parent=FBgn0033799.1.mrna1;Target=FBgn0033799.1 151 305 +
Chr2	stalkie_big_nohaplotig	CDS	57683793	57683942	.	-	0	Parent=FBgn0033799.1.mrna1;Target=FBgn0033799.1 1 150 +
Chr2	gffcl	locus	57676827	57678763	.	-	.	ID=RLOC_00017602;geneIDs=AAEL017378.1.path3;transcripts=AAEL017378.1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	57676827	57678763	.	-	.	ID=AAEL017378.1.mrna3;geneID=AAEL017378.1.path3;Name=AAEL017378.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1927;mismatches=10;indels=4;unknowns=0;Target=AAEL017378.1 1941 1 .;CDS_Target=AAEL017378.1 164 87 .;locus=RLOC_00017602
Chr2	stalkie_big_nohaplotig	exon	57676827	57678763	99	-	.	Parent=AAEL017378.1.mrna3
Chr2	stalkie_big_nohaplotig	CDS	57678601	57678677	.	-	0	Parent=AAEL017378.1.mrna3
Chr2	gffcl	locus	57691789	57692126	.	+	.	ID=RLOC_00017603;geneIDs=comp135114_c0_seq1.path1;transcripts=comp135114_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57691789	57692126	.	+	.	ID=comp135114_c0_seq1.mrna1;geneID=comp135114_c0_seq1.path1;Name=comp135114_c0_seq1;Dir=indeterminatecoverage=40.0;identity=99.6;matches=237;mismatches=1;indels=0;unknowns=100;Target=comp135114_c0_seq1 355 18 .;CDS_Target=comp135114_c0_seq1 258 172 .;locus=RLOC_00017603
Chr2	stalkie_big_nohaplotig	exon	57691789	57692126	99	+	.	Parent=comp135114_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	57691943	57692029	.	+	0	Parent=comp135114_c0_seq1.mrna1
Chr2	gffcl	locus	57703478	57704850	.	+	.	ID=RLOC_00017604;geneIDs=comp162740_c1_seq1.path1;transcripts=comp162740_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57703478	57704850	.	+	.	ID=comp162740_c1_seq1.mrna1;geneID=comp162740_c1_seq1.path1;Name=comp162740_c1_seq1;Dir=sensecoverage=97.6;identity=95.2;matches=1037;mismatches=43;indels=9;unknowns=0;Target=comp162740_c1_seq1 214 336 +;locus=RLOC_00017604
Chr2	stalkie_big_nohaplotig	exon	57703478	57703824	98	+	.	Parent=comp162740_c1_seq1.mrna1;Target=comp162740_c1_seq1 12 357 +
Chr2	stalkie_big_nohaplotig	exon	57703893	57703924	96	+	.	Parent=comp162740_c1_seq1.mrna1;Target=comp162740_c1_seq1 358 389 +
Chr2	stalkie_big_nohaplotig	exon	57704038	57704252	94	+	.	Parent=comp162740_c1_seq1.mrna1;Target=comp162740_c1_seq1 390 607 +
Chr2	stalkie_big_nohaplotig	exon	57704310	57704452	90	+	.	Parent=comp162740_c1_seq1.mrna1;Target=comp162740_c1_seq1 608 753 +
Chr2	stalkie_big_nohaplotig	exon	57704506	57704850	93	+	.	Parent=comp162740_c1_seq1.mrna1;Target=comp162740_c1_seq1 754 1098 +
Chr2	stalkie_big_nohaplotig	CDS	57703681	57703803	.	+	0	Parent=comp162740_c1_seq1.mrna1
Chr2	gffcl	locus	57812183	57818012	.	+	.	ID=RLOC_00017606;geneIDs=comp142966_c0_seq1.path1,comp155974_c0_seq1.path1;transcripts=comp155974_c0_seq1.mrna1,comp142966_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57812183	57813183	.	+	.	ID=comp155974_c0_seq1.mrna1;geneID=comp155974_c0_seq1.path1;Name=comp155974_c0_seq1;Dir=antisensecoverage=97.2;identity=93.6;matches=687;mismatches=18;indels=29;unknowns=0;Target=comp155974_c0_seq1 336 449 .;locus=RLOC_00017606
Chr2	stalkie_big_nohaplotig	exon	57812183	57812255	95	+	.	Parent=comp155974_c0_seq1.mrna1;Target=comp155974_c0_seq1 654 726 -
Chr2	stalkie_big_nohaplotig	exon	57812326	57812363	92	+	.	Parent=comp155974_c0_seq1.mrna1;Target=comp155974_c0_seq1 616 653 -
Chr2	stalkie_big_nohaplotig	exon	57812505	57812849	88	+	.	Parent=comp155974_c0_seq1.mrna1;Target=comp155974_c0_seq1 298 615 -
Chr2	stalkie_big_nohaplotig	exon	57812907	57813183	99	+	.	Parent=comp155974_c0_seq1.mrna1;Target=comp155974_c0_seq1 21 297 -
Chr2	stalkie_big_nohaplotig	CDS	57812671	57812811	.	+	0	Parent=comp155974_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57812331	57818012	.	+	.	ID=comp142966_c0_seq1.mrna1;geneID=comp142966_c0_seq1.path1;Name=comp142966_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=946;mismatches=5;indels=1;unknowns=0;Target=comp142966_c0_seq1 47 124 .;locus=RLOC_00017606
Chr2	stalkie_big_nohaplotig	exon	57812331	57812363	100	+	.	Parent=comp142966_c0_seq1.mrna1;Target=comp142966_c0_seq1 920 952 -
Chr2	stalkie_big_nohaplotig	exon	57817033	57817263	100	+	.	Parent=comp142966_c0_seq1.mrna1;Target=comp142966_c0_seq1 689 919 -
Chr2	stalkie_big_nohaplotig	exon	57817326	57818012	99	+	.	Parent=comp142966_c0_seq1.mrna1;Target=comp142966_c0_seq1 1 688 -
Chr2	stalkie_big_nohaplotig	CDS	57817890	57817966	.	+	0	Parent=comp142966_c0_seq1.mrna1
Chr2	gffcl	locus	57854762	57855507	.	+	.	ID=RLOC_00017607;geneIDs=FBgn0031707.1.path1;transcripts=FBgn0031707.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57854762	57855507	.	+	.	ID=FBgn0031707.1.mrna1;geneID=FBgn0031707.1.path1;Name=FBgn0031707.1;Dir=indeterminatecoverage=98.3;identity=97.7;matches=729;mismatches=17;indels=0;unknowns=0;Target=FBgn0031707.1 747 2 .;CDS_Target=FBgn0031707.1 747 4 .;locus=RLOC_00017607
Chr2	stalkie_big_nohaplotig	exon	57854762	57855507	97	+	.	Parent=FBgn0031707.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	57854764	57855507	.	+	0	Parent=FBgn0031707.1.mrna1
Chr2	gffcl	locus	57857680	57899730	.	-	.	ID=RLOC_00017608;geneIDs=FBgn0261625.1.path1,comp114298_c0_seq1.path1,comp159794_c1_seq1.path1;transcripts=comp159794_c1_seq1.mrna1,FBgn0261625.1.mrna1,comp114298_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57857680	57869070	.	-	.	ID=comp159794_c1_seq1.mrna1;geneID=comp159794_c1_seq1.path1;Name=comp159794_c1_seq1;Dir=antisensecoverage=99.2;identity=99.7;matches=3729;mismatches=9;indels=1;unknowns=0;locus=RLOC_00017608
Chr2	stalkie_big_nohaplotig	exon	57857680	57858782	99	-	.	Parent=comp159794_c1_seq1.mrna1;Target=comp159794_c1_seq1 17 1118 -
Chr2	stalkie_big_nohaplotig	exon	57859644	57860390	100	-	.	Parent=comp159794_c1_seq1.mrna1;Target=comp159794_c1_seq1 1119 1865 -
Chr2	stalkie_big_nohaplotig	exon	57860454	57860734	100	-	.	Parent=comp159794_c1_seq1.mrna1;Target=comp159794_c1_seq1 1866 2146 -
Chr2	stalkie_big_nohaplotig	exon	57860802	57861583	100	-	.	Parent=comp159794_c1_seq1.mrna1;Target=comp159794_c1_seq1 2147 2928 -
Chr2	stalkie_big_nohaplotig	exon	57861657	57861896	100	-	.	Parent=comp159794_c1_seq1.mrna1;Target=comp159794_c1_seq1 2929 3168 -
Chr2	stalkie_big_nohaplotig	exon	57868485	57869070	99	-	.	Parent=comp159794_c1_seq1.mrna1;Target=comp159794_c1_seq1 3169 3754 -
Chr2	stalkie_big_nohaplotig	CDS	57858672	57858782	.	-	0	Parent=comp159794_c1_seq1.mrna1;Target=comp159794_c1_seq1 1008 1118 .
Chr2	stalkie_big_nohaplotig	CDS	57859644	57860390	.	-	0	Parent=comp159794_c1_seq1.mrna1;Target=comp159794_c1_seq1 1119 1865 .
Chr2	stalkie_big_nohaplotig	CDS	57860454	57860717	.	-	0	Parent=comp159794_c1_seq1.mrna1;Target=comp159794_c1_seq1 1866 2129 .
Chr2	stalkie_big_nohaplotig	mRNA	57858675	57868702	.	-	.	ID=FBgn0261625.1.mrna1;geneID=FBgn0261625.1.path1;Name=FBgn0261625.1;Dir=sensecoverage=100.0;identity=99.9;matches=1967;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017608
Chr2	stalkie_big_nohaplotig	exon	57858675	57858782	100	-	.	Parent=FBgn0261625.1.mrna1;Target=FBgn0261625.1 1861 1968 +
Chr2	stalkie_big_nohaplotig	exon	57859644	57860390	100	-	.	Parent=FBgn0261625.1.mrna1;Target=FBgn0261625.1 1114 1860 +
Chr2	stalkie_big_nohaplotig	exon	57860454	57860734	100	-	.	Parent=FBgn0261625.1.mrna1;Target=FBgn0261625.1 833 1113 +
Chr2	stalkie_big_nohaplotig	exon	57860802	57860917	100	-	.	Parent=FBgn0261625.1.mrna1;Target=FBgn0261625.1 717 832 +
Chr2	stalkie_big_nohaplotig	exon	57861326	57861583	100	-	.	Parent=FBgn0261625.1.mrna1;Target=FBgn0261625.1 459 716 +
Chr2	stalkie_big_nohaplotig	exon	57861657	57861896	100	-	.	Parent=FBgn0261625.1.mrna1;Target=FBgn0261625.1 219 458 +
Chr2	stalkie_big_nohaplotig	exon	57868485	57868702	99	-	.	Parent=FBgn0261625.1.mrna1;Target=FBgn0261625.1 1 218 +
Chr2	stalkie_big_nohaplotig	CDS	57858675	57858782	.	-	0	Parent=FBgn0261625.1.mrna1;Target=FBgn0261625.1 1861 1968 +
Chr2	stalkie_big_nohaplotig	CDS	57859644	57860390	.	-	0	Parent=FBgn0261625.1.mrna1;Target=FBgn0261625.1 1114 1860 +
Chr2	stalkie_big_nohaplotig	CDS	57860454	57860734	.	-	2	Parent=FBgn0261625.1.mrna1;Target=FBgn0261625.1 833 1113 +
Chr2	stalkie_big_nohaplotig	CDS	57860802	57860917	.	-	1	Parent=FBgn0261625.1.mrna1;Target=FBgn0261625.1 717 832 +
Chr2	stalkie_big_nohaplotig	CDS	57861326	57861583	.	-	1	Parent=FBgn0261625.1.mrna1;Target=FBgn0261625.1 459 716 +
Chr2	stalkie_big_nohaplotig	CDS	57861657	57861896	.	-	1	Parent=FBgn0261625.1.mrna1;Target=FBgn0261625.1 219 458 +
Chr2	stalkie_big_nohaplotig	CDS	57868485	57868702	.	-	0	Parent=FBgn0261625.1.mrna1;Target=FBgn0261625.1 1 218 +
Chr2	stalkie_big_nohaplotig	mRNA	57861873	57899730	.	-	.	ID=comp114298_c0_seq1.mrna1;geneID=comp114298_c0_seq1.path1;Name=comp114298_c0_seq1;Dir=antisensecoverage=99.8;identity=99.8;matches=538;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017608
Chr2	stalkie_big_nohaplotig	exon	57861873	57861896	100	-	.	Parent=comp114298_c0_seq1.mrna1;Target=comp114298_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	exon	57866149	57866178	100	-	.	Parent=comp114298_c0_seq1.mrna1;Target=comp114298_c0_seq1 25 54 -
Chr2	stalkie_big_nohaplotig	exon	57886110	57886210	100	-	.	Parent=comp114298_c0_seq1.mrna1;Target=comp114298_c0_seq1 55 155 -
Chr2	stalkie_big_nohaplotig	exon	57899347	57899730	99	-	.	Parent=comp114298_c0_seq1.mrna1;Target=comp114298_c0_seq1 156 539 -
Chr2	stalkie_big_nohaplotig	CDS	57861875	57861896	.	-	1	Parent=comp114298_c0_seq1.mrna1;Target=comp114298_c0_seq1 3 24 .
Chr2	stalkie_big_nohaplotig	CDS	57866149	57866178	.	-	1	Parent=comp114298_c0_seq1.mrna1;Target=comp114298_c0_seq1 25 54 .
Chr2	stalkie_big_nohaplotig	CDS	57886110	57886210	.	-	0	Parent=comp114298_c0_seq1.mrna1;Target=comp114298_c0_seq1 55 155 .
Chr2	stalkie_big_nohaplotig	CDS	57899347	57899661	.	-	0	Parent=comp114298_c0_seq1.mrna1;Target=comp114298_c0_seq1 156 470 .
Chr2	gffcl	locus	57858846	57859409	.	+	.	ID=RLOC_00017609;geneIDs=comp151588_c0_seq1.path1;transcripts=comp151588_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57858846	57859409	.	+	.	ID=comp151588_c0_seq1.mrna1;geneID=comp151588_c0_seq1.path1;Name=comp151588_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.1;matches=554;mismatches=10;indels=1;unknowns=0;Target=comp151588_c0_seq1 565 1 .;CDS_Target=comp151588_c0_seq1 267 190 .;locus=RLOC_00017609
Chr2	stalkie_big_nohaplotig	exon	57858846	57859409	98	+	.	Parent=comp151588_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	57859035	57859112	.	+	0	Parent=comp151588_c0_seq1.mrna1
Chr2	gffcl	locus	57873740	57874004	.	+	.	ID=RLOC_00017610;geneIDs=comp141708_c0_seq1.path1;transcripts=comp141708_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57873740	57874004	.	+	.	ID=comp141708_c0_seq1.mrna1;geneID=comp141708_c0_seq1.path1;Name=comp141708_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.2;matches=264;mismatches=1;indels=1;unknowns=0;Target=comp141708_c0_seq1 266 1 .;CDS_Target=comp141708_c0_seq1 68 3 .;locus=RLOC_00017610
Chr2	stalkie_big_nohaplotig	exon	57873740	57874004	99	+	.	Parent=comp141708_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	57873742	57873807	.	+	0	Parent=comp141708_c0_seq1.mrna1
Chr2	gffcl	locus	57879808	57880692	.	-	.	ID=RLOC_00017611;geneIDs=Dv_FBgn0206941.2.path2;transcripts=Dv_FBgn0206941.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	57879808	57880692	.	-	.	ID=Dv_FBgn0206941.2.mrna2;geneID=Dv_FBgn0206941.2.path2;Name=Dv_FBgn0206941.2;Dir=indeterminatecoverage=100.0;identity=99.9;matches=884;mismatches=1;indels=0;unknowns=0;Target=Dv_FBgn0206941.2 885 1 .;locus=RLOC_00017611
Chr2	stalkie_big_nohaplotig	exon	57879808	57880692	99	-	.	Parent=Dv_FBgn0206941.2.mrna2
Chr2	stalkie_big_nohaplotig	CDS	57879808	57880692	.	-	0	Parent=Dv_FBgn0206941.2.mrna2
Chr2	gffcl	locus	57903950	57910826	.	-	.	ID=RLOC_00017612;geneIDs=FBgn0033766.1.path1;transcripts=FBgn0033766.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57903950	57910826	.	-	.	ID=FBgn0033766.1.mrna1;geneID=FBgn0033766.1.path1;Name=FBgn0033766.1;Dir=sensecoverage=100.0;identity=99.8;matches=5686;mismatches=11;indels=0;unknowns=0;locus=RLOC_00017612
Chr2	stalkie_big_nohaplotig	exon	57903950	57904870	99	-	.	Parent=FBgn0033766.1.mrna1;Target=FBgn0033766.1 4777 5697 +
Chr2	stalkie_big_nohaplotig	exon	57904941	57905154	99	-	.	Parent=FBgn0033766.1.mrna1;Target=FBgn0033766.1 4563 4776 +
Chr2	stalkie_big_nohaplotig	exon	57905821	57905969	100	-	.	Parent=FBgn0033766.1.mrna1;Target=FBgn0033766.1 4414 4562 +
Chr2	stalkie_big_nohaplotig	exon	57906030	57908088	99	-	.	Parent=FBgn0033766.1.mrna1;Target=FBgn0033766.1 2355 4413 +
Chr2	stalkie_big_nohaplotig	exon	57908167	57908432	100	-	.	Parent=FBgn0033766.1.mrna1;Target=FBgn0033766.1 2089 2354 +
Chr2	stalkie_big_nohaplotig	exon	57908495	57909193	100	-	.	Parent=FBgn0033766.1.mrna1;Target=FBgn0033766.1 1390 2088 +
Chr2	stalkie_big_nohaplotig	exon	57909261	57909370	100	-	.	Parent=FBgn0033766.1.mrna1;Target=FBgn0033766.1 1280 1389 +
Chr2	stalkie_big_nohaplotig	exon	57909432	57909600	100	-	.	Parent=FBgn0033766.1.mrna1;Target=FBgn0033766.1 1111 1279 +
Chr2	stalkie_big_nohaplotig	exon	57909658	57910723	100	-	.	Parent=FBgn0033766.1.mrna1;Target=FBgn0033766.1 45 1110 +
Chr2	stalkie_big_nohaplotig	exon	57910783	57910826	100	-	.	Parent=FBgn0033766.1.mrna1;Target=FBgn0033766.1 1 44 +
Chr2	stalkie_big_nohaplotig	CDS	57903950	57904870	.	-	0	Parent=FBgn0033766.1.mrna1;Target=FBgn0033766.1 4777 5697 +
Chr2	stalkie_big_nohaplotig	CDS	57904941	57905154	.	-	1	Parent=FBgn0033766.1.mrna1;Target=FBgn0033766.1 4563 4776 +
Chr2	stalkie_big_nohaplotig	CDS	57905821	57905969	.	-	0	Parent=FBgn0033766.1.mrna1;Target=FBgn0033766.1 4414 4562 +
Chr2	stalkie_big_nohaplotig	CDS	57906030	57908088	.	-	1	Parent=FBgn0033766.1.mrna1;Target=FBgn0033766.1 2355 4413 +
Chr2	stalkie_big_nohaplotig	CDS	57908167	57908432	.	-	0	Parent=FBgn0033766.1.mrna1;Target=FBgn0033766.1 2089 2354 +
Chr2	stalkie_big_nohaplotig	CDS	57908495	57909193	.	-	0	Parent=FBgn0033766.1.mrna1;Target=FBgn0033766.1 1390 2088 +
Chr2	stalkie_big_nohaplotig	CDS	57909261	57909370	.	-	2	Parent=FBgn0033766.1.mrna1;Target=FBgn0033766.1 1280 1389 +
Chr2	stalkie_big_nohaplotig	CDS	57909432	57909600	.	-	0	Parent=FBgn0033766.1.mrna1;Target=FBgn0033766.1 1111 1279 +
Chr2	stalkie_big_nohaplotig	CDS	57909658	57910723	.	-	1	Parent=FBgn0033766.1.mrna1;Target=FBgn0033766.1 45 1110 +
Chr2	stalkie_big_nohaplotig	CDS	57910783	57910826	.	-	0	Parent=FBgn0033766.1.mrna1;Target=FBgn0033766.1 1 44 +
Chr2	gffcl	locus	57914265	57916069	.	+	.	ID=RLOC_00017613;geneIDs=FBgn0033767.1.path1;transcripts=FBgn0033767.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57914265	57916069	.	+	.	ID=FBgn0033767.1.mrna1;geneID=FBgn0033767.1.path1;Name=FBgn0033767.1;Dir=sensecoverage=100.0;identity=100.0;matches=1119;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017613
Chr2	stalkie_big_nohaplotig	exon	57914265	57914421	100	+	.	Parent=FBgn0033767.1.mrna1;Target=FBgn0033767.1 1 157 +
Chr2	stalkie_big_nohaplotig	exon	57915108	57916069	100	+	.	Parent=FBgn0033767.1.mrna1;Target=FBgn0033767.1 158 1119 +
Chr2	stalkie_big_nohaplotig	CDS	57914265	57914421	.	+	0	Parent=FBgn0033767.1.mrna1;Target=FBgn0033767.1 1 157 +
Chr2	stalkie_big_nohaplotig	CDS	57915108	57916069	.	+	2	Parent=FBgn0033767.1.mrna1;Target=FBgn0033767.1 158 1119 +
Chr2	gffcl	locus	57918961	57920058	.	-	.	ID=RLOC_00017614;geneIDs=FBgn0050053.1.path1;transcripts=FBgn0050053.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57918961	57920058	.	-	.	ID=FBgn0050053.1.mrna1;geneID=FBgn0050053.1.path1;Name=FBgn0050053.1;Dir=sensecoverage=100.0;identity=98.8;matches=1031;mismatches=13;indels=0;unknowns=0;locus=RLOC_00017614
Chr2	stalkie_big_nohaplotig	exon	57918961	57919592	98	-	.	Parent=FBgn0050053.1.mrna1;Target=FBgn0050053.1 413 1044 +
Chr2	stalkie_big_nohaplotig	exon	57919647	57920058	98	-	.	Parent=FBgn0050053.1.mrna1;Target=FBgn0050053.1 1 412 +
Chr2	stalkie_big_nohaplotig	CDS	57918961	57919592	.	-	2	Parent=FBgn0050053.1.mrna1;Target=FBgn0050053.1 413 1044 +
Chr2	stalkie_big_nohaplotig	CDS	57919647	57920058	.	-	0	Parent=FBgn0050053.1.mrna1;Target=FBgn0050053.1 1 412 +
Chr2	gffcl	locus	57924787	57926054	.	-	.	ID=RLOC_00017615;geneIDs=comp162740_c1_seq1.path2;transcripts=comp162740_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	57924787	57926054	.	-	.	ID=comp162740_c1_seq1.mrna2;geneID=comp162740_c1_seq1.path2;Name=comp162740_c1_seq1;Dir=sensecoverage=85.1;identity=93.8;matches=876;mismatches=35;indels=23;unknowns=0;Target=comp162740_c1_seq1 13 54 +;locus=RLOC_00017615
Chr2	stalkie_big_nohaplotig	exon	57924787	57924966	85	-	.	Parent=comp162740_c1_seq1.mrna2;Target=comp162740_c1_seq1 769 959 +
Chr2	stalkie_big_nohaplotig	exon	57925048	57925193	95	-	.	Parent=comp162740_c1_seq1.mrna2;Target=comp162740_c1_seq1 608 753 +
Chr2	stalkie_big_nohaplotig	exon	57925251	57925468	97	-	.	Parent=comp162740_c1_seq1.mrna2;Target=comp162740_c1_seq1 390 607 +
Chr2	stalkie_big_nohaplotig	exon	57925619	57925650	96	-	.	Parent=comp162740_c1_seq1.mrna2;Target=comp162740_c1_seq1 358 389 +
Chr2	stalkie_big_nohaplotig	exon	57925719	57926054	94	-	.	Parent=comp162740_c1_seq1.mrna2;Target=comp162740_c1_seq1 12 357 +
Chr2	stalkie_big_nohaplotig	CDS	57926012	57926053	.	-	0	Parent=comp162740_c1_seq1.mrna2
Chr2	gffcl	locus	57927609	57928454	.	-	.	ID=RLOC_00017616;geneIDs=FBgn0050052.1.path1;transcripts=FBgn0050052.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57927609	57928454	.	-	.	ID=FBgn0050052.1.mrna1;geneID=FBgn0050052.1.path1;Name=FBgn0050052.1;Dir=sensecoverage=100.0;identity=99.2;matches=658;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017616
Chr2	stalkie_big_nohaplotig	exon	57927609	57927989	98	-	.	Parent=FBgn0050052.1.mrna1;Target=FBgn0050052.1 283 663 +
Chr2	stalkie_big_nohaplotig	exon	57928053	57928223	100	-	.	Parent=FBgn0050052.1.mrna1;Target=FBgn0050052.1 112 282 +
Chr2	stalkie_big_nohaplotig	exon	57928281	57928334	100	-	.	Parent=FBgn0050052.1.mrna1;Target=FBgn0050052.1 58 111 +
Chr2	stalkie_big_nohaplotig	exon	57928398	57928454	100	-	.	Parent=FBgn0050052.1.mrna1;Target=FBgn0050052.1 1 57 +
Chr2	stalkie_big_nohaplotig	CDS	57927609	57927989	.	-	0	Parent=FBgn0050052.1.mrna1;Target=FBgn0050052.1 283 663 +
Chr2	stalkie_big_nohaplotig	CDS	57928053	57928223	.	-	0	Parent=FBgn0050052.1.mrna1;Target=FBgn0050052.1 112 282 +
Chr2	stalkie_big_nohaplotig	CDS	57928281	57928334	.	-	0	Parent=FBgn0050052.1.mrna1;Target=FBgn0050052.1 58 111 +
Chr2	stalkie_big_nohaplotig	CDS	57928398	57928454	.	-	0	Parent=FBgn0050052.1.mrna1;Target=FBgn0050052.1 1 57 +
Chr2	gffcl	locus	57991522	57992116	.	+	.	ID=RLOC_00017617;geneIDs=comp357120_c0_seq1.path1;transcripts=comp357120_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	57991522	57992116	.	+	.	ID=comp357120_c0_seq1.mrna1;geneID=comp357120_c0_seq1.path1;Name=comp357120_c0_seq1;Dir=indeterminatecoverage=100.0;identity=89.8;matches=552;mismatches=35;indels=28;unknowns=0;Target=comp357120_c0_seq1 607 1 .;CDS_Target=comp357120_c0_seq1 431 375 .;locus=RLOC_00017617
Chr2	stalkie_big_nohaplotig	exon	57991522	57992116	89	+	.	Parent=comp357120_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	57991894	57991954	.	+	0	Parent=comp357120_c0_seq1.mrna1
Chr2	gffcl	locus	58039459	58064360	.	+	.	ID=RLOC_00017619;geneIDs=comp147589_c0_seq1.path1;transcripts=comp147589_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58039459	58064360	.	+	.	ID=comp147589_c0_seq1.mrna1;geneID=comp147589_c0_seq1.path1;Name=comp147589_c0_seq1;Dir=indeterminatecoverage=90.2;identity=99.1;matches=1012;mismatches=9;indels=0;unknowns=0;Target=comp147589_c0_seq1 874 2 .;locus=RLOC_00017619
Chr2	stalkie_big_nohaplotig	exon	58039459	58040453	99	+	.	Parent=comp147589_c0_seq1.mrna1;Target=comp147589_c0_seq1 995 1 .
Chr2	stalkie_big_nohaplotig	exon	58044536	58044545	90	+	.	Parent=comp147589_c0_seq1.mrna1;Target=comp147589_c0_seq1 1005 996 .
Chr2	stalkie_big_nohaplotig	exon	58059607	58059615	100	+	.	Parent=comp147589_c0_seq1.mrna1;Target=comp147589_c0_seq1 1014 1006 .
Chr2	stalkie_big_nohaplotig	exon	58064354	58064360	100	+	.	Parent=comp147589_c0_seq1.mrna1;Target=comp147589_c0_seq1 1021 1015 .
Chr2	stalkie_big_nohaplotig	CDS	58039460	58040332	.	+	0	Parent=comp147589_c0_seq1.mrna1
Chr2	gffcl	locus	58081768	58083243	.	-	.	ID=RLOC_00017620;geneIDs=FBgn0033773.1.path1;transcripts=FBgn0033773.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58081768	58083243	.	-	.	ID=FBgn0033773.1.mrna1;geneID=FBgn0033773.1.path1;Name=FBgn0033773.1;Dir=sensecoverage=100.0;identity=99.8;matches=1156;mismatches=1;indels=1;unknowns=0;locus=RLOC_00017620
Chr2	stalkie_big_nohaplotig	exon	58081768	58082312	99	-	.	Parent=FBgn0033773.1.mrna1;Target=FBgn0033773.1 613 1158 +
Chr2	stalkie_big_nohaplotig	exon	58082423	58082630	100	-	.	Parent=FBgn0033773.1.mrna1;Target=FBgn0033773.1 405 612 +
Chr2	stalkie_big_nohaplotig	exon	58082685	58082791	100	-	.	Parent=FBgn0033773.1.mrna1;Target=FBgn0033773.1 298 404 +
Chr2	stalkie_big_nohaplotig	exon	58082857	58082972	100	-	.	Parent=FBgn0033773.1.mrna1;Target=FBgn0033773.1 182 297 +
Chr2	stalkie_big_nohaplotig	exon	58083063	58083243	100	-	.	Parent=FBgn0033773.1.mrna1;Target=FBgn0033773.1 1 181 +
Chr2	stalkie_big_nohaplotig	CDS	58081768	58082312	.	-	0	Parent=FBgn0033773.1.mrna1;Target=FBgn0033773.1 613 1158 +
Chr2	stalkie_big_nohaplotig	CDS	58082423	58082630	.	-	1	Parent=FBgn0033773.1.mrna1;Target=FBgn0033773.1 405 612 +
Chr2	stalkie_big_nohaplotig	CDS	58082685	58082791	.	-	0	Parent=FBgn0033773.1.mrna1;Target=FBgn0033773.1 298 404 +
Chr2	stalkie_big_nohaplotig	CDS	58082857	58082972	.	-	2	Parent=FBgn0033773.1.mrna1;Target=FBgn0033773.1 182 297 +
Chr2	stalkie_big_nohaplotig	CDS	58083063	58083243	.	-	0	Parent=FBgn0033773.1.mrna1;Target=FBgn0033773.1 1 181 +
Chr2	gffcl	locus	58084126	58098595	.	-	.	ID=RLOC_00017621;geneIDs=FBgn0026619.1.path1,comp157779_c0_seq1.path1;transcripts=comp157779_c0_seq1.mrna1,FBgn0026619.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58084126	58098142	.	-	.	ID=comp157779_c0_seq1.mrna1;geneID=comp157779_c0_seq1.path1;Name=comp157779_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=2304;mismatches=26;indels=0;unknowns=0;locus=RLOC_00017621
Chr2	stalkie_big_nohaplotig	exon	58084126	58084940	96	-	.	Parent=comp157779_c0_seq1.mrna1;Target=comp157779_c0_seq1 1 815 -
Chr2	stalkie_big_nohaplotig	exon	58085411	58085484	100	-	.	Parent=comp157779_c0_seq1.mrna1;Target=comp157779_c0_seq1 816 889 -
Chr2	stalkie_big_nohaplotig	exon	58085554	58085942	100	-	.	Parent=comp157779_c0_seq1.mrna1;Target=comp157779_c0_seq1 890 1278 -
Chr2	stalkie_big_nohaplotig	exon	58086010	58086117	100	-	.	Parent=comp157779_c0_seq1.mrna1;Target=comp157779_c0_seq1 1279 1386 -
Chr2	stalkie_big_nohaplotig	exon	58086204	58086332	100	-	.	Parent=comp157779_c0_seq1.mrna1;Target=comp157779_c0_seq1 1387 1515 -
Chr2	stalkie_big_nohaplotig	exon	58097045	58097422	100	-	.	Parent=comp157779_c0_seq1.mrna1;Target=comp157779_c0_seq1 1516 1893 -
Chr2	stalkie_big_nohaplotig	exon	58097706	58098142	99	-	.	Parent=comp157779_c0_seq1.mrna1;Target=comp157779_c0_seq1 1894 2330 -
Chr2	stalkie_big_nohaplotig	CDS	58085440	58085484	.	-	0	Parent=comp157779_c0_seq1.mrna1;Target=comp157779_c0_seq1 845 889 .
Chr2	stalkie_big_nohaplotig	CDS	58085554	58085942	.	-	2	Parent=comp157779_c0_seq1.mrna1;Target=comp157779_c0_seq1 890 1278 .
Chr2	stalkie_big_nohaplotig	CDS	58086010	58086117	.	-	2	Parent=comp157779_c0_seq1.mrna1;Target=comp157779_c0_seq1 1279 1386 .
Chr2	stalkie_big_nohaplotig	CDS	58086204	58086332	.	-	2	Parent=comp157779_c0_seq1.mrna1;Target=comp157779_c0_seq1 1387 1515 .
Chr2	stalkie_big_nohaplotig	CDS	58097045	58097291	.	-	0	Parent=comp157779_c0_seq1.mrna1;Target=comp157779_c0_seq1 1516 1762 .
Chr2	stalkie_big_nohaplotig	mRNA	58085443	58098595	.	-	.	ID=FBgn0026619.1.mrna1;geneID=FBgn0026619.1.path1;Name=FBgn0026619.1;Dir=sensecoverage=100.0;identity=100.0;matches=981;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017621
Chr2	stalkie_big_nohaplotig	exon	58085443	58085484	100	-	.	Parent=FBgn0026619.1.mrna1;Target=FBgn0026619.1 940 981 +
Chr2	stalkie_big_nohaplotig	exon	58085554	58085942	100	-	.	Parent=FBgn0026619.1.mrna1;Target=FBgn0026619.1 551 939 +
Chr2	stalkie_big_nohaplotig	exon	58086010	58086117	100	-	.	Parent=FBgn0026619.1.mrna1;Target=FBgn0026619.1 443 550 +
Chr2	stalkie_big_nohaplotig	exon	58086204	58086332	100	-	.	Parent=FBgn0026619.1.mrna1;Target=FBgn0026619.1 314 442 +
Chr2	stalkie_big_nohaplotig	exon	58097045	58097249	100	-	.	Parent=FBgn0026619.1.mrna1;Target=FBgn0026619.1 109 313 +
Chr2	stalkie_big_nohaplotig	exon	58098488	58098595	100	-	.	Parent=FBgn0026619.1.mrna1;Target=FBgn0026619.1 1 108 +
Chr2	stalkie_big_nohaplotig	CDS	58085443	58085484	.	-	0	Parent=FBgn0026619.1.mrna1;Target=FBgn0026619.1 940 981 +
Chr2	stalkie_big_nohaplotig	CDS	58085554	58085942	.	-	2	Parent=FBgn0026619.1.mrna1;Target=FBgn0026619.1 551 939 +
Chr2	stalkie_big_nohaplotig	CDS	58086010	58086117	.	-	2	Parent=FBgn0026619.1.mrna1;Target=FBgn0026619.1 443 550 +
Chr2	stalkie_big_nohaplotig	CDS	58086204	58086332	.	-	2	Parent=FBgn0026619.1.mrna1;Target=FBgn0026619.1 314 442 +
Chr2	stalkie_big_nohaplotig	CDS	58097045	58097249	.	-	0	Parent=FBgn0026619.1.mrna1;Target=FBgn0026619.1 109 313 +
Chr2	stalkie_big_nohaplotig	CDS	58098488	58098595	.	-	0	Parent=FBgn0026619.1.mrna1;Target=FBgn0026619.1 1 108 +
Chr2	gffcl	locus	58084976	58085200	.	-	.	ID=RLOC_00017622;geneIDs=comp141960_c0_seq1.path1;transcripts=comp141960_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58084976	58085200	.	-	.	ID=comp141960_c0_seq1.mrna1;geneID=comp141960_c0_seq1.path1;Name=comp141960_c0_seq1;Dir=indeterminatecoverage=83.3;identity=100.0;matches=225;mismatches=0;indels=0;unknowns=0;Target=comp141960_c0_seq1 225 1 .;CDS_Target=comp141960_c0_seq1 65 15 .;locus=RLOC_00017622
Chr2	stalkie_big_nohaplotig	exon	58084976	58085200	100	-	.	Parent=comp141960_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	58085136	58085186	.	-	0	Parent=comp141960_c0_seq1.mrna1
Chr2	gffcl	locus	58099785	58100354	.	+	.	ID=RLOC_00017623;geneIDs=FBgn0026741.1.path1;transcripts=FBgn0026741.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58099785	58100354	.	+	.	ID=FBgn0026741.1.mrna1;geneID=FBgn0026741.1.path1;Name=FBgn0026741.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=570;mismatches=0;indels=0;unknowns=0;Target=FBgn0026741.1 570 1 .;locus=RLOC_00017623
Chr2	stalkie_big_nohaplotig	exon	58099785	58100354	100	+	.	Parent=FBgn0026741.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	58099785	58100354	.	+	0	Parent=FBgn0026741.1.mrna1
Chr2	gffcl	locus	58100370	58100828	.	-	.	ID=RLOC_00017624;geneIDs=comp126528_c0_seq1.path1;transcripts=comp126528_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58100370	58100828	.	-	.	ID=comp126528_c0_seq1.mrna1;geneID=comp126528_c0_seq1.path1;Name=comp126528_c0_seq1;Dir=sensecoverage=94.8;identity=99.8;matches=401;mismatches=0;indels=1;unknowns=0;Target=comp126528_c0_seq1 151 168 +;locus=RLOC_00017624
Chr2	stalkie_big_nohaplotig	exon	58100370	58100488	100	-	.	Parent=comp126528_c0_seq1.mrna1;Target=comp126528_c0_seq1 284 402 +
Chr2	stalkie_big_nohaplotig	exon	58100547	58100828	99	-	.	Parent=comp126528_c0_seq1.mrna1;Target=comp126528_c0_seq1 1 283 +
Chr2	stalkie_big_nohaplotig	CDS	58100662	58100678	.	-	0	Parent=comp126528_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58117636	58118276	.	+	.	ID=comp135580_c0_seq1.mrna1;geneID=comp135580_c0_seq1.path1;Name=comp135580_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=543;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017625
Chr2	stalkie_big_nohaplotig	exon	58117636	58118159	99	+	.	Parent=comp135580_c0_seq1.mrna1;Target=comp135580_c0_seq1 22 545 -
Chr2	stalkie_big_nohaplotig	exon	58118256	58118276	100	+	.	Parent=comp135580_c0_seq1.mrna1;Target=comp135580_c0_seq1 1 21 -
Chr2	stalkie_big_nohaplotig	CDS	58117862	58118159	.	+	0	Parent=comp135580_c0_seq1.mrna1;Target=comp135580_c0_seq1 22 319 .
Chr2	stalkie_big_nohaplotig	CDS	58118256	58118275	.	+	2	Parent=comp135580_c0_seq1.mrna1;Target=comp135580_c0_seq1 2 21 .
Chr2	gffcl	locus	58122115	58122720	.	-	.	ID=RLOC_00017626;geneIDs=comp157860_c0_seq1.path1;transcripts=comp157860_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58122115	58122720	.	-	.	ID=comp157860_c0_seq1.mrna1;geneID=comp157860_c0_seq1.path1;Name=comp157860_c0_seq1;Dir=indeterminatecoverage=99.7;identity=97.5;matches=591;mismatches=15;indels=0;unknowns=0;Target=comp157860_c0_seq1 606 1 .;CDS_Target=comp157860_c0_seq1 513 373 .;locus=RLOC_00017626
Chr2	stalkie_big_nohaplotig	exon	58122115	58122720	97	-	.	Parent=comp157860_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	58122208	58122348	.	-	0	Parent=comp157860_c0_seq1.mrna1
Chr2	gffcl	locus	58125808	58127505	.	+	.	ID=RLOC_00017627;geneIDs=comp163149_c0_seq1.path1;transcripts=comp163149_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58125808	58127505	.	+	.	ID=comp163149_c0_seq1.mrna1;geneID=comp163149_c0_seq1.path1;Name=comp163149_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.7;matches=1416;mismatches=29;indels=19;unknowns=0;locus=RLOC_00017627
Chr2	stalkie_big_nohaplotig	exon	58125808	58126971	97	+	.	Parent=comp163149_c0_seq1.mrna1;Target=comp163149_c0_seq1 1159 2 .
Chr2	stalkie_big_nohaplotig	exon	58127207	58127505	94	+	.	Parent=comp163149_c0_seq1.mrna1;Target=comp163149_c0_seq1 1447 1160 .
Chr2	stalkie_big_nohaplotig	CDS	58126842	58126971	.	+	0	Parent=comp163149_c0_seq1.mrna1;Target=comp163149_c0_seq1 1159 1030 .
Chr2	stalkie_big_nohaplotig	CDS	58127207	58127396	.	+	2	Parent=comp163149_c0_seq1.mrna1;Target=comp163149_c0_seq1 1338 1160 .
Chr2	gffcl	locus	58127998	58188048	.	-	.	ID=RLOC_00017628;geneIDs=FBgn0033491.1.path1;transcripts=FBgn0033491.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58127998	58188048	.	-	.	ID=FBgn0033491.1.mrna1;geneID=FBgn0033491.1.path1;Name=FBgn0033491.1;Dir=sensecoverage=78.1;identity=99.6;matches=1890;mismatches=8;indels=0;unknowns=0;locus=RLOC_00017628
Chr2	stalkie_big_nohaplotig	exon	58127998	58128502	99	-	.	Parent=FBgn0033491.1.mrna1;Target=FBgn0033491.1 1944 2448 +
Chr2	stalkie_big_nohaplotig	exon	58128563	58128747	100	-	.	Parent=FBgn0033491.1.mrna1;Target=FBgn0033491.1 1759 1943 +
Chr2	stalkie_big_nohaplotig	exon	58128807	58129042	100	-	.	Parent=FBgn0033491.1.mrna1;Target=FBgn0033491.1 1523 1758 +
Chr2	stalkie_big_nohaplotig	exon	58130839	58131067	100	-	.	Parent=FBgn0033491.1.mrna1;Target=FBgn0033491.1 1294 1522 +
Chr2	stalkie_big_nohaplotig	exon	58131126	58131389	100	-	.	Parent=FBgn0033491.1.mrna1;Target=FBgn0033491.1 1030 1293 +
Chr2	stalkie_big_nohaplotig	exon	58131447	58131626	99	-	.	Parent=FBgn0033491.1.mrna1;Target=FBgn0033491.1 850 1029 +
Chr2	stalkie_big_nohaplotig	exon	58131688	58131817	100	-	.	Parent=FBgn0033491.1.mrna1;Target=FBgn0033491.1 720 849 +
Chr2	stalkie_big_nohaplotig	exon	58131872	58132015	97	-	.	Parent=FBgn0033491.1.mrna1;Target=FBgn0033491.1 576 719 +
Chr2	stalkie_big_nohaplotig	exon	58132083	58132084	100	-	.	Parent=FBgn0033491.1.mrna1;Target=FBgn0033491.1 574 575 +
Chr2	stalkie_big_nohaplotig	exon	58147590	58147600	100	-	.	Parent=FBgn0033491.1.mrna1;Target=FBgn0033491.1 563 573 +
Chr2	stalkie_big_nohaplotig	exon	58188038	58188048	100	-	.	Parent=FBgn0033491.1.mrna1;Target=FBgn0033491.1 536 546 +
Chr2	stalkie_big_nohaplotig	CDS	58127998	58128502	.	-	2	Parent=FBgn0033491.1.mrna1;Target=FBgn0033491.1 1944 2448 +
Chr2	stalkie_big_nohaplotig	CDS	58128563	58128747	.	-	1	Parent=FBgn0033491.1.mrna1;Target=FBgn0033491.1 1759 1943 +
Chr2	stalkie_big_nohaplotig	CDS	58128807	58129042	.	-	0	Parent=FBgn0033491.1.mrna1;Target=FBgn0033491.1 1523 1758 +
Chr2	stalkie_big_nohaplotig	CDS	58130839	58131067	.	-	1	Parent=FBgn0033491.1.mrna1;Target=FBgn0033491.1 1294 1522 +
Chr2	stalkie_big_nohaplotig	CDS	58131126	58131389	.	-	1	Parent=FBgn0033491.1.mrna1;Target=FBgn0033491.1 1030 1293 +
Chr2	stalkie_big_nohaplotig	CDS	58131447	58131626	.	-	1	Parent=FBgn0033491.1.mrna1;Target=FBgn0033491.1 850 1029 +
Chr2	stalkie_big_nohaplotig	CDS	58131688	58131817	.	-	2	Parent=FBgn0033491.1.mrna1;Target=FBgn0033491.1 720 849 +
Chr2	stalkie_big_nohaplotig	CDS	58131872	58132015	.	-	2	Parent=FBgn0033491.1.mrna1;Target=FBgn0033491.1 576 719 +
Chr2	stalkie_big_nohaplotig	CDS	58132083	58132084	.	-	1	Parent=FBgn0033491.1.mrna1;Target=FBgn0033491.1 574 575 +
Chr2	stalkie_big_nohaplotig	CDS	58147590	58147600	.	-	0	Parent=FBgn0033491.1.mrna1;Target=FBgn0033491.1 563 573 +
Chr2	stalkie_big_nohaplotig	CDS	58188038	58188046	.	-	0	Parent=FBgn0033491.1.mrna1;Target=FBgn0033491.1 538 546 +
Chr2	gffcl	locus	58132741	58132949	.	-	.	ID=RLOC_00017629;geneIDs=comp140856_c0_seq1.path2;transcripts=comp140856_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	58132741	58132949	.	-	.	ID=comp140856_c0_seq1.mrna2;geneID=comp140856_c0_seq1.path2;Name=comp140856_c0_seq1;Dir=indeterminatecoverage=98.7;identity=87.6;matches=204;mismatches=3;indels=26;unknowns=0;Target=comp140856_c0_seq1 231 1 .;CDS_Target=comp140856_c0_seq1 58 2 .;locus=RLOC_00017629
Chr2	stalkie_big_nohaplotig	exon	58132741	58132949	87	-	.	Parent=comp140856_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	58132891	58132948	.	-	0	Parent=comp140856_c0_seq1.mrna2
Chr2	gffcl	locus	58152169	58152802	.	-	.	ID=RLOC_00017630;geneIDs=comp61405_c0_seq1.path1;transcripts=comp61405_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58152169	58152802	.	-	.	ID=comp61405_c0_seq1.mrna1;geneID=comp61405_c0_seq1.path1;Name=comp61405_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.8;matches=633;mismatches=1;indels=0;unknowns=0;Target=comp61405_c0_seq1 639 6 .;CDS_Target=comp61405_c0_seq1 94 8 .;locus=RLOC_00017630
Chr2	stalkie_big_nohaplotig	exon	58152169	58152802	99	-	.	Parent=comp61405_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	58152714	58152800	.	-	0	Parent=comp61405_c0_seq1.mrna1
Chr2	gffcl	locus	58161096	58163075	.	+	.	ID=RLOC_00017631;geneIDs=FBgn0000256.1.path1;transcripts=FBgn0000256.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58161096	58163075	.	+	.	ID=FBgn0000256.1.mrna1;geneID=FBgn0000256.1.path1;Name=FBgn0000256.1;Dir=sensecoverage=100.0;identity=99.9;matches=1919;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017631
Chr2	stalkie_big_nohaplotig	exon	58161096	58162716	99	+	.	Parent=FBgn0000256.1.mrna1;Target=FBgn0000256.1 1 1621 +
Chr2	stalkie_big_nohaplotig	exon	58162777	58163075	100	+	.	Parent=FBgn0000256.1.mrna1;Target=FBgn0000256.1 1622 1920 +
Chr2	stalkie_big_nohaplotig	CDS	58161096	58162716	.	+	0	Parent=FBgn0000256.1.mrna1;Target=FBgn0000256.1 1 1621 +
Chr2	stalkie_big_nohaplotig	CDS	58162777	58163075	.	+	2	Parent=FBgn0000256.1.mrna1;Target=FBgn0000256.1 1622 1920 +
Chr2	gffcl	locus	58170030	58170530	.	+	.	ID=RLOC_00017632;geneIDs=FBgn0260392.1.path1;transcripts=FBgn0260392.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58170030	58170530	.	+	.	ID=FBgn0260392.1.mrna1;geneID=FBgn0260392.1.path1;Name=FBgn0260392.1;Dir=sensecoverage=100.0;identity=100.0;matches=279;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017632
Chr2	stalkie_big_nohaplotig	exon	58170030	58170232	100	+	.	Parent=FBgn0260392.1.mrna1;Target=FBgn0260392.1 1 203 +
Chr2	stalkie_big_nohaplotig	exon	58170455	58170530	100	+	.	Parent=FBgn0260392.1.mrna1;Target=FBgn0260392.1 204 279 +
Chr2	stalkie_big_nohaplotig	CDS	58170030	58170232	.	+	0	Parent=FBgn0260392.1.mrna1;Target=FBgn0260392.1 1 203 +
Chr2	stalkie_big_nohaplotig	CDS	58170455	58170530	.	+	1	Parent=FBgn0260392.1.mrna1;Target=FBgn0260392.1 204 279 +
Chr2	gffcl	locus	58172940	58177294	.	-	.	ID=RLOC_00017633;geneIDs=FBgn0027836.1.path1;transcripts=FBgn0027836.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58172940	58177294	.	-	.	ID=FBgn0027836.1.mrna1;geneID=FBgn0027836.1.path1;Name=FBgn0027836.1;Dir=sensecoverage=100.0;identity=99.4;matches=1981;mismatches=11;indels=0;unknowns=0;locus=RLOC_00017633
Chr2	stalkie_big_nohaplotig	exon	58172940	58173563	99	-	.	Parent=FBgn0027836.1.mrna1;Target=FBgn0027836.1 1369 1992 +
Chr2	stalkie_big_nohaplotig	exon	58173620	58174216	99	-	.	Parent=FBgn0027836.1.mrna1;Target=FBgn0027836.1 772 1368 +
Chr2	stalkie_big_nohaplotig	exon	58174280	58174458	98	-	.	Parent=FBgn0027836.1.mrna1;Target=FBgn0027836.1 593 771 +
Chr2	stalkie_big_nohaplotig	exon	58176577	58176740	100	-	.	Parent=FBgn0027836.1.mrna1;Target=FBgn0027836.1 429 592 +
Chr2	stalkie_big_nohaplotig	exon	58176799	58176979	100	-	.	Parent=FBgn0027836.1.mrna1;Target=FBgn0027836.1 248 428 +
Chr2	stalkie_big_nohaplotig	exon	58177048	58177294	100	-	.	Parent=FBgn0027836.1.mrna1;Target=FBgn0027836.1 1 247 +
Chr2	stalkie_big_nohaplotig	CDS	58172940	58173563	.	-	0	Parent=FBgn0027836.1.mrna1;Target=FBgn0027836.1 1369 1992 +
Chr2	stalkie_big_nohaplotig	CDS	58173620	58174216	.	-	0	Parent=FBgn0027836.1.mrna1;Target=FBgn0027836.1 772 1368 +
Chr2	stalkie_big_nohaplotig	CDS	58174280	58174458	.	-	2	Parent=FBgn0027836.1.mrna1;Target=FBgn0027836.1 593 771 +
Chr2	stalkie_big_nohaplotig	CDS	58176577	58176740	.	-	1	Parent=FBgn0027836.1.mrna1;Target=FBgn0027836.1 429 592 +
Chr2	stalkie_big_nohaplotig	CDS	58176799	58176979	.	-	2	Parent=FBgn0027836.1.mrna1;Target=FBgn0027836.1 248 428 +
Chr2	stalkie_big_nohaplotig	CDS	58177048	58177294	.	-	0	Parent=FBgn0027836.1.mrna1;Target=FBgn0027836.1 1 247 +
Chr2	gffcl	locus	58228235	58247833	.	-	.	ID=RLOC_00017635;geneIDs=FBgn0011746.1.path1;transcripts=FBgn0011746.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58228235	58247833	.	-	.	ID=FBgn0011746.1.mrna1;geneID=FBgn0011746.1.path1;Name=FBgn0011746.1;Dir=sensecoverage=100.0;identity=99.8;matches=1431;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017635
Chr2	stalkie_big_nohaplotig	exon	58228235	58228628	99	-	.	Parent=FBgn0011746.1.mrna1;Target=FBgn0011746.1 1041 1434 +
Chr2	stalkie_big_nohaplotig	exon	58231874	58231946	98	-	.	Parent=FBgn0011746.1.mrna1;Target=FBgn0011746.1 968 1040 +
Chr2	stalkie_big_nohaplotig	exon	58232853	58233098	100	-	.	Parent=FBgn0011746.1.mrna1;Target=FBgn0011746.1 722 967 +
Chr2	stalkie_big_nohaplotig	exon	58233155	58233528	99	-	.	Parent=FBgn0011746.1.mrna1;Target=FBgn0011746.1 348 721 +
Chr2	stalkie_big_nohaplotig	exon	58247487	58247833	100	-	.	Parent=FBgn0011746.1.mrna1;Target=FBgn0011746.1 1 347 +
Chr2	stalkie_big_nohaplotig	CDS	58228235	58228628	.	-	1	Parent=FBgn0011746.1.mrna1;Target=FBgn0011746.1 1041 1434 +
Chr2	stalkie_big_nohaplotig	CDS	58231874	58231946	.	-	2	Parent=FBgn0011746.1.mrna1;Target=FBgn0011746.1 968 1040 +
Chr2	stalkie_big_nohaplotig	CDS	58232853	58233098	.	-	2	Parent=FBgn0011746.1.mrna1;Target=FBgn0011746.1 722 967 +
Chr2	stalkie_big_nohaplotig	CDS	58233155	58233528	.	-	1	Parent=FBgn0011746.1.mrna1;Target=FBgn0011746.1 348 721 +
Chr2	stalkie_big_nohaplotig	CDS	58247487	58247833	.	-	0	Parent=FBgn0011746.1.mrna1;Target=FBgn0011746.1 1 347 +
Chr2	gffcl	locus	58271486	58272695	.	+	.	ID=RLOC_00017636;geneIDs=FBgn0033369.1.path1;transcripts=FBgn0033369.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58271486	58272695	.	+	.	ID=FBgn0033369.1.mrna1;geneID=FBgn0033369.1.path1;Name=FBgn0033369.1;Dir=sensecoverage=100.0;identity=99.6;matches=1147;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017636
Chr2	stalkie_big_nohaplotig	exon	58271486	58271897	99	+	.	Parent=FBgn0033369.1.mrna1;Target=FBgn0033369.1 1 412 +
Chr2	stalkie_big_nohaplotig	exon	58271956	58272695	99	+	.	Parent=FBgn0033369.1.mrna1;Target=FBgn0033369.1 413 1152 +
Chr2	stalkie_big_nohaplotig	CDS	58271486	58271897	.	+	0	Parent=FBgn0033369.1.mrna1;Target=FBgn0033369.1 1 412 +
Chr2	stalkie_big_nohaplotig	CDS	58271956	58272695	.	+	2	Parent=FBgn0033369.1.mrna1;Target=FBgn0033369.1 413 1152 +
Chr2	gffcl	locus	58341595	58342869	.	+	.	ID=RLOC_00017637;geneIDs=comp162311_c0_seq1.path1;transcripts=comp162311_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58341595	58342869	.	+	.	ID=comp162311_c0_seq1.mrna1;geneID=comp162311_c0_seq1.path1;Name=comp162311_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1265;mismatches=10;indels=3;unknowns=0;Target=comp162311_c0_seq1 1278 1 .;CDS_Target=comp162311_c0_seq1 1188 1063 .;locus=RLOC_00017637
Chr2	stalkie_big_nohaplotig	exon	58341595	58342869	98	+	.	Parent=comp162311_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	58342654	58342779	.	+	0	Parent=comp162311_c0_seq1.mrna1
Chr2	gffcl	locus	58344669	58347098	.	+	.	ID=RLOC_00017638;geneIDs=FBgn0033367.1.path1;transcripts=FBgn0033367.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58344669	58347098	.	+	.	ID=FBgn0033367.1.mrna1;geneID=FBgn0033367.1.path1;Name=FBgn0033367.1;Dir=sensecoverage=100.0;identity=100.0;matches=2187;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017638
Chr2	stalkie_big_nohaplotig	exon	58344669	58345784	100	+	.	Parent=FBgn0033367.1.mrna1;Target=FBgn0033367.1 1 1116 +
Chr2	stalkie_big_nohaplotig	exon	58345860	58346481	100	+	.	Parent=FBgn0033367.1.mrna1;Target=FBgn0033367.1 1117 1738 +
Chr2	stalkie_big_nohaplotig	exon	58346586	58346821	100	+	.	Parent=FBgn0033367.1.mrna1;Target=FBgn0033367.1 1739 1974 +
Chr2	stalkie_big_nohaplotig	exon	58346886	58347098	100	+	.	Parent=FBgn0033367.1.mrna1;Target=FBgn0033367.1 1975 2187 +
Chr2	stalkie_big_nohaplotig	CDS	58344669	58345784	.	+	0	Parent=FBgn0033367.1.mrna1;Target=FBgn0033367.1 1 1116 +
Chr2	stalkie_big_nohaplotig	CDS	58345860	58346481	.	+	0	Parent=FBgn0033367.1.mrna1;Target=FBgn0033367.1 1117 1738 +
Chr2	stalkie_big_nohaplotig	CDS	58346586	58346821	.	+	2	Parent=FBgn0033367.1.mrna1;Target=FBgn0033367.1 1739 1974 +
Chr2	stalkie_big_nohaplotig	CDS	58346886	58347098	.	+	0	Parent=FBgn0033367.1.mrna1;Target=FBgn0033367.1 1975 2187 +
Chr2	gffcl	locus	58349187	58349376	.	+	.	ID=RLOC_00017639;geneIDs=comp140682_c0_seq1.path1;transcripts=comp140682_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58349187	58349376	.	+	.	ID=comp140682_c0_seq1.mrna1;geneID=comp140682_c0_seq1.path1;Name=comp140682_c0_seq1;Dir=indeterminatecoverage=57.8;identity=93.7;matches=178;mismatches=12;indels=0;unknowns=0;Target=comp140682_c0_seq1 329 140 .;CDS_Target=comp140682_c0_seq1 216 142 .;locus=RLOC_00017639
Chr2	stalkie_big_nohaplotig	exon	58349187	58349376	93	+	.	Parent=comp140682_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	58349189	58349263	.	+	0	Parent=comp140682_c0_seq1.mrna1
Chr2	gffcl	locus	58378469	58379078	.	-	.	ID=RLOC_00017640;geneIDs=comp1516094_c0_seq1.path1;transcripts=comp1516094_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58378469	58379078	.	-	.	ID=comp1516094_c0_seq1.mrna1;geneID=comp1516094_c0_seq1.path1;Name=comp1516094_c0_seq1;Dir=indeterminatecoverage=95.9;identity=94.6;matches=582;mismatches=22;indels=11;unknowns=0;Target=comp1516094_c0_seq1 629 21 .;CDS_Target=comp1516094_c0_seq1 542 513 .;locus=RLOC_00017640
Chr2	stalkie_big_nohaplotig	exon	58378469	58379078	94	-	.	Parent=comp1516094_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	58378556	58378585	.	-	0	Parent=comp1516094_c0_seq1.mrna1
Chr2	gffcl	locus	58415241	58415949	.	+	.	ID=RLOC_00017641;geneIDs=comp150085_c0_seq1.path1;transcripts=comp150085_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58415241	58415949	.	+	.	ID=comp150085_c0_seq1.mrna1;geneID=comp150085_c0_seq1.path1;Name=comp150085_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.8;matches=669;mismatches=40;indels=12;unknowns=0;Target=comp150085_c0_seq1 721 1 .;CDS_Target=comp150085_c0_seq1 383 309 .;locus=RLOC_00017641
Chr2	stalkie_big_nohaplotig	exon	58415241	58415949	92	+	.	Parent=comp150085_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	58415548	58415611	.	+	0	Parent=comp150085_c0_seq1.mrna1
Chr2	gffcl	locus	58416472	58420219	.	.	.	ID=RLOC_00017642;geneIDs=comp140629_c0_seq1.path1,comp149433_c0_seq1.path1,comp161805_c1_seq1.path1;transcripts=comp161805_c1_seq1.mrna1,comp140629_c0_seq1.mrna1,comp149433_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58416472	58420219	.	-	.	ID=comp161805_c1_seq1.mrna1;geneID=comp161805_c1_seq1.path1;Name=comp161805_c1_seq1;Dir=sensecoverage=83.7;identity=97.8;matches=1687;mismatches=38;indels=0;unknowns=0;locus=RLOC_00017642
Chr2	stalkie_big_nohaplotig	exon	58416472	58416595	99	-	.	Parent=comp161805_c1_seq1.mrna1;Target=comp161805_c1_seq1 1627 1750 +
Chr2	stalkie_big_nohaplotig	exon	58416659	58416661	100	-	.	Parent=comp161805_c1_seq1.mrna1;Target=comp161805_c1_seq1 1624 1626 +
Chr2	stalkie_big_nohaplotig	exon	58417217	58417433	97	-	.	Parent=comp161805_c1_seq1.mrna1;Target=comp161805_c1_seq1 1407 1623 +
Chr2	stalkie_big_nohaplotig	exon	58417500	58418193	97	-	.	Parent=comp161805_c1_seq1.mrna1;Target=comp161805_c1_seq1 713 1406 +
Chr2	stalkie_big_nohaplotig	exon	58418264	58418825	97	-	.	Parent=comp161805_c1_seq1.mrna1;Target=comp161805_c1_seq1 151 712 +
Chr2	stalkie_big_nohaplotig	exon	58420095	58420219	99	-	.	Parent=comp161805_c1_seq1.mrna1;Target=comp161805_c1_seq1 26 150 +
Chr2	stalkie_big_nohaplotig	CDS	58416581	58416595	.	-	0	Parent=comp161805_c1_seq1.mrna1;Target=comp161805_c1_seq1 1627 1641 +
Chr2	stalkie_big_nohaplotig	CDS	58416659	58416661	.	-	0	Parent=comp161805_c1_seq1.mrna1;Target=comp161805_c1_seq1 1624 1626 +
Chr2	stalkie_big_nohaplotig	CDS	58417217	58417433	.	-	1	Parent=comp161805_c1_seq1.mrna1;Target=comp161805_c1_seq1 1407 1623 +
Chr2	stalkie_big_nohaplotig	CDS	58417500	58418193	.	-	2	Parent=comp161805_c1_seq1.mrna1;Target=comp161805_c1_seq1 713 1406 +
Chr2	stalkie_big_nohaplotig	CDS	58418264	58418825	.	-	0	Parent=comp161805_c1_seq1.mrna1;Target=comp161805_c1_seq1 151 712 +
Chr2	stalkie_big_nohaplotig	CDS	58420095	58420142	.	-	0	Parent=comp161805_c1_seq1.mrna1;Target=comp161805_c1_seq1 103 150 +
Chr2	stalkie_big_nohaplotig	mRNA	58416573	58417214	.	+	.	ID=comp140629_c0_seq1.mrna1;geneID=comp140629_c0_seq1.path1;Name=comp140629_c0_seq1;Dir=indeterminatecoverage=100.0;identity=86.9;matches=576;mismatches=22;indels=65;unknowns=0;Target=comp140629_c0_seq1 619 1 .;CDS_Target=comp140629_c0_seq1 249 139 .;locus=RLOC_00017642
Chr2	stalkie_big_nohaplotig	exon	58416573	58417214	86	+	.	Parent=comp140629_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	58416711	58416821	.	+	0	Parent=comp140629_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58418941	58420118	.	+	.	ID=comp149433_c0_seq1.mrna1;geneID=comp149433_c0_seq1.path1;Name=comp149433_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.2;matches=1126;mismatches=39;indels=30;unknowns=0;Target=comp149433_c0_seq1 1182 1 .;CDS_Target=comp149433_c0_seq1 185 129 .;locus=RLOC_00017642
Chr2	stalkie_big_nohaplotig	exon	58418941	58420118	94	+	.	Parent=comp149433_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	58419052	58419108	.	+	0	Parent=comp149433_c0_seq1.mrna1
Chr2	gffcl	locus	58425297	58430004	.	+	.	ID=RLOC_00017643;geneIDs=FBgn0033366.3.path1,comp155280_c0_seq1.path1;transcripts=FBgn0033366.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58425297	58429522	.	+	.	ID=FBgn0033366.3.mrna1;geneID=FBgn0033366.3.path1;Name=FBgn0033366.3;Dir=sensecoverage=98.3;identity=91.1;matches=1450;mismatches=142;indels=0;unknowns=0;locus=RLOC_00017643
Chr2	stalkie_big_nohaplotig	exon	58425297	58425423	99	+	.	Parent=FBgn0033366.3.mrna1;Target=FBgn0033366.3 15 141 +
Chr2	stalkie_big_nohaplotig	exon	58427905	58428459	94	+	.	Parent=FBgn0033366.3.mrna1;Target=FBgn0033366.3 142 696 +
Chr2	stalkie_big_nohaplotig	exon	58428536	58429227	88	+	.	Parent=FBgn0033366.3.mrna1;Target=FBgn0033366.3 710 1401 +
Chr2	stalkie_big_nohaplotig	exon	58429305	58429522	88	+	.	Parent=FBgn0033366.3.mrna1;Target=FBgn0033366.3 1402 1619 +
Chr2	stalkie_big_nohaplotig	CDS	58428580	58429227	.	+	0	Parent=FBgn0033366.3.mrna1;Target=FBgn0033366.3 754 1401 +
Chr2	stalkie_big_nohaplotig	CDS	58429305	58429520	.	+	0	Parent=FBgn0033366.3.mrna1;Target=FBgn0033366.3 1402 1617 +
Chr2	gffcl	locus	58430616	58431998	.	+	.	ID=RLOC_00017644;geneIDs=comp156285_c1_seq1.path1;transcripts=comp156285_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58430616	58431998	.	+	.	ID=comp156285_c1_seq1.mrna1;geneID=comp156285_c1_seq1.path1;Name=comp156285_c1_seq1;Dir=indeterminatecoverage=99.9;identity=95.2;matches=1337;mismatches=44;indels=24;unknowns=0;Target=comp156285_c1_seq1 1403 1 .;CDS_Target=comp156285_c1_seq1 793 494 .;locus=RLOC_00017644
Chr2	stalkie_big_nohaplotig	exon	58430616	58431998	95	+	.	Parent=comp156285_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	58431107	58431405	.	+	0	Parent=comp156285_c1_seq1.mrna1
Chr2	gffcl	locus	58432993	58435031	.	+	.	ID=RLOC_00017645;geneIDs=FBgn0033366.1.path1;transcripts=FBgn0033366.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58432993	58435031	.	+	.	ID=FBgn0033366.1.mrna1;geneID=FBgn0033366.1.path1;Name=FBgn0033366.1;Dir=sensecoverage=99.6;identity=99.3;matches=1764;mismatches=13;indels=0;unknowns=0;locus=RLOC_00017645
Chr2	stalkie_big_nohaplotig	exon	58432993	58433560	99	+	.	Parent=FBgn0033366.1.mrna1;Target=FBgn0033366.1 1 568 +
Chr2	stalkie_big_nohaplotig	exon	58433644	58434332	99	+	.	Parent=FBgn0033366.1.mrna1;Target=FBgn0033366.1 569 1257 +
Chr2	stalkie_big_nohaplotig	exon	58434390	58434607	99	+	.	Parent=FBgn0033366.1.mrna1;Target=FBgn0033366.1 1258 1475 +
Chr2	stalkie_big_nohaplotig	exon	58434668	58434790	98	+	.	Parent=FBgn0033366.1.mrna1;Target=FBgn0033366.1 1476 1598 +
Chr2	stalkie_big_nohaplotig	exon	58434853	58435031	98	+	.	Parent=FBgn0033366.1.mrna1;Target=FBgn0033366.1 1599 1777 +
Chr2	stalkie_big_nohaplotig	CDS	58432993	58433560	.	+	0	Parent=FBgn0033366.1.mrna1;Target=FBgn0033366.1 1 568 +
Chr2	stalkie_big_nohaplotig	CDS	58433644	58434332	.	+	2	Parent=FBgn0033366.1.mrna1;Target=FBgn0033366.1 569 1257 +
Chr2	stalkie_big_nohaplotig	CDS	58434390	58434607	.	+	0	Parent=FBgn0033366.1.mrna1;Target=FBgn0033366.1 1258 1475 +
Chr2	stalkie_big_nohaplotig	CDS	58434668	58434790	.	+	1	Parent=FBgn0033366.1.mrna1;Target=FBgn0033366.1 1476 1598 +
Chr2	stalkie_big_nohaplotig	CDS	58434853	58435030	.	+	1	Parent=FBgn0033366.1.mrna1;Target=FBgn0033366.1 1599 1776 +
Chr2	gffcl	locus	58438408	58442273	.	+	.	ID=RLOC_00017646;geneIDs=FBgn0033366.2.path1;transcripts=FBgn0033366.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58438408	58442273	.	+	.	ID=FBgn0033366.2.mrna1;geneID=FBgn0033366.2.path1;Name=FBgn0033366.2;Dir=sensecoverage=100.0;identity=98.8;matches=1855;mismatches=23;indels=0;unknowns=0;locus=RLOC_00017646
Chr2	stalkie_big_nohaplotig	exon	58438408	58438464	100	+	.	Parent=FBgn0033366.2.mrna1;Target=FBgn0033366.2 1 57 +
Chr2	stalkie_big_nohaplotig	exon	58440142	58440700	98	+	.	Parent=FBgn0033366.2.mrna1;Target=FBgn0033366.2 58 616 +
Chr2	stalkie_big_nohaplotig	exon	58440788	58441482	98	+	.	Parent=FBgn0033366.2.mrna1;Target=FBgn0033366.2 617 1311 +
Chr2	stalkie_big_nohaplotig	exon	58441536	58441753	99	+	.	Parent=FBgn0033366.2.mrna1;Target=FBgn0033366.2 1312 1529 +
Chr2	stalkie_big_nohaplotig	exon	58441816	58441938	100	+	.	Parent=FBgn0033366.2.mrna1;Target=FBgn0033366.2 1530 1652 +
Chr2	stalkie_big_nohaplotig	exon	58441997	58442175	98	+	.	Parent=FBgn0033366.2.mrna1;Target=FBgn0033366.2 1653 1831 +
Chr2	stalkie_big_nohaplotig	exon	58442227	58442273	95	+	.	Parent=FBgn0033366.2.mrna1;Target=FBgn0033366.2 1832 1878 +
Chr2	stalkie_big_nohaplotig	CDS	58438408	58438464	.	+	0	Parent=FBgn0033366.2.mrna1;Target=FBgn0033366.2 1 57 +
Chr2	stalkie_big_nohaplotig	CDS	58440142	58440700	.	+	0	Parent=FBgn0033366.2.mrna1;Target=FBgn0033366.2 58 616 +
Chr2	stalkie_big_nohaplotig	CDS	58440788	58441482	.	+	2	Parent=FBgn0033366.2.mrna1;Target=FBgn0033366.2 617 1311 +
Chr2	stalkie_big_nohaplotig	CDS	58441536	58441753	.	+	0	Parent=FBgn0033366.2.mrna1;Target=FBgn0033366.2 1312 1529 +
Chr2	stalkie_big_nohaplotig	CDS	58441816	58441938	.	+	1	Parent=FBgn0033366.2.mrna1;Target=FBgn0033366.2 1530 1652 +
Chr2	stalkie_big_nohaplotig	CDS	58441997	58442175	.	+	1	Parent=FBgn0033366.2.mrna1;Target=FBgn0033366.2 1653 1831 +
Chr2	stalkie_big_nohaplotig	CDS	58442227	58442273	.	+	2	Parent=FBgn0033366.2.mrna1;Target=FBgn0033366.2 1832 1878 +
Chr2	gffcl	locus	58477334	58479752	.	-	.	ID=RLOC_00017647;geneIDs=comp81674_c0_seq1.path1;transcripts=comp81674_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58477334	58479752	.	-	.	ID=comp81674_c0_seq1.mrna1;geneID=comp81674_c0_seq1.path1;Name=comp81674_c0_seq1;Dir=sensecoverage=100.0;identity=98.1;matches=367;mismatches=7;indels=0;unknowns=0;locus=RLOC_00017647
Chr2	stalkie_big_nohaplotig	exon	58477334	58477482	98	-	.	Parent=comp81674_c0_seq1.mrna1;Target=comp81674_c0_seq1 226 374 +
Chr2	stalkie_big_nohaplotig	exon	58477560	58477741	97	-	.	Parent=comp81674_c0_seq1.mrna1;Target=comp81674_c0_seq1 44 225 +
Chr2	stalkie_big_nohaplotig	exon	58479710	58479752	97	-	.	Parent=comp81674_c0_seq1.mrna1;Target=comp81674_c0_seq1 1 43 +
Chr2	stalkie_big_nohaplotig	CDS	58477379	58477482	.	-	2	Parent=comp81674_c0_seq1.mrna1;Target=comp81674_c0_seq1 226 329 +
Chr2	stalkie_big_nohaplotig	CDS	58477560	58477741	.	-	1	Parent=comp81674_c0_seq1.mrna1;Target=comp81674_c0_seq1 44 225 +
Chr2	stalkie_big_nohaplotig	CDS	58479710	58479750	.	-	0	Parent=comp81674_c0_seq1.mrna1;Target=comp81674_c0_seq1 3 43 +
Chr2	gffcl	locus	58595700	61561726	.	+	.	ID=RLOC_00017648;geneIDs=FBgn0050089.path1;transcripts=FBgn0050089.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58595700	61561726	.	+	.	ID=FBgn0050089.mrna1;geneID=FBgn0050089.path1;Name=FBgn0050089;Dir=sensecoverage=100.0;identity=99.8;matches=1847;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017648
Chr2	stalkie_big_nohaplotig	exon	58595700	58596520	99	+	.	Parent=FBgn0050089.mrna1;Target=FBgn0050089 1 821 +
Chr2	stalkie_big_nohaplotig	exon	58689178	58689362	100	+	.	Parent=FBgn0050089.mrna1;Target=FBgn0050089 822 1006 +
Chr2	stalkie_big_nohaplotig	exon	58704153	58704375	100	+	.	Parent=FBgn0050089.mrna1;Target=FBgn0050089 1007 1229 +
Chr2	stalkie_big_nohaplotig	exon	58704757	58704849	100	+	.	Parent=FBgn0050089.mrna1;Target=FBgn0050089 1230 1322 +
Chr2	stalkie_big_nohaplotig	exon	58715663	58716191	99	+	.	Parent=FBgn0050089.mrna1;Target=FBgn0050089 1323 1851 +
Chr2	stalkie_big_nohaplotig	exon	61560915	61561726	99	+	.	Parent=FBgn0050089.mrna1;Target=FBgn0050089 875 64 .
Chr2	stalkie_big_nohaplotig	CDS	58595700	58596520	.	+	0	Parent=FBgn0050089.mrna1;Target=FBgn0050089 1 821 +
Chr2	stalkie_big_nohaplotig	CDS	58689178	58689362	.	+	1	Parent=FBgn0050089.mrna1;Target=FBgn0050089 822 1006 +
Chr2	stalkie_big_nohaplotig	CDS	58704153	58704375	.	+	2	Parent=FBgn0050089.mrna1;Target=FBgn0050089 1007 1229 +
Chr2	stalkie_big_nohaplotig	CDS	58704757	58704849	.	+	1	Parent=FBgn0050089.mrna1;Target=FBgn0050089 1230 1322 +
Chr2	stalkie_big_nohaplotig	CDS	58715663	58716191	.	+	1	Parent=FBgn0050089.mrna1;Target=FBgn0050089 1323 1851 +
Chr2	stalkie_big_nohaplotig	CDS	61560915	61561724	.	+	0	Parent=FBgn0050089.mrna1;Target=FBgn0050089 873 64 .
Chr2	gffcl	locus	58679625	58680530	.	-	.	ID=RLOC_00017649;geneIDs=comp148481_c0_seq1.path1;transcripts=comp148481_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58679625	58680530	.	-	.	ID=comp148481_c0_seq1.mrna1;geneID=comp148481_c0_seq1.path1;Name=comp148481_c0_seq1;Dir=indeterminatecoverage=71.3;identity=94.5;matches=549;mismatches=16;indels=16;unknowns=0;Target=comp148481_c0_seq1 200 3 .;locus=RLOC_00017649
Chr2	stalkie_big_nohaplotig	exon	58679625	58679782	81	-	.	Parent=comp148481_c0_seq1.mrna1;Target=comp148481_c0_seq1 621 475 .
Chr2	stalkie_big_nohaplotig	exon	58680086	58680093	100	-	.	Parent=comp148481_c0_seq1.mrna1;Target=comp148481_c0_seq1 435 428 .
Chr2	stalkie_big_nohaplotig	exon	58680118	58680530	99	-	.	Parent=comp148481_c0_seq1.mrna1;Target=comp148481_c0_seq1 413 2 .
Chr2	stalkie_big_nohaplotig	CDS	58680331	58680529	.	-	0	Parent=comp148481_c0_seq1.mrna1
Chr2	gffcl	locus	58739647	58740949	.	+	.	ID=RLOC_00017650;geneIDs=comp163442_c0_seq1.path1;transcripts=comp163442_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58739647	58740949	.	+	.	ID=comp163442_c0_seq1.mrna1;geneID=comp163442_c0_seq1.path1;Name=comp163442_c0_seq1;Dir=indeterminatecoverage=64.5;identity=92.2;matches=1236;mismatches=57;indels=48;unknowns=0;Target=comp163442_c0_seq1 2064 734 .;CDS_Target=comp163442_c0_seq1 1993 1868 .;locus=RLOC_00017650
Chr2	stalkie_big_nohaplotig	exon	58739647	58740949	92	+	.	Parent=comp163442_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	58740759	58740878	.	+	0	Parent=comp163442_c0_seq1.mrna1
Chr2	gffcl	locus	58748504	58749175	.	-	.	ID=RLOC_00017651;geneIDs=comp152499_c0_seq1.path1;transcripts=comp152499_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58748504	58749175	.	-	.	ID=comp152499_c0_seq1.mrna1;geneID=comp152499_c0_seq1.path1;Name=comp152499_c0_seq1;Dir=indeterminatecoverage=93.0;identity=89.0;matches=598;mismatches=51;indels=23;unknowns=0;Target=comp152499_c0_seq1 693 45 .;CDS_Target=comp152499_c0_seq1 664 554 .;locus=RLOC_00017651
Chr2	stalkie_big_nohaplotig	exon	58748504	58749175	88	-	.	Parent=comp152499_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	58748533	58748643	.	-	0	Parent=comp152499_c0_seq1.mrna1
Chr2	gffcl	locus	58841401	58842212	.	-	.	ID=RLOC_00017652;geneIDs=comp112701_c0_seq1.path1;transcripts=comp112701_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58841401	58842212	.	-	.	ID=comp112701_c0_seq1.mrna1;geneID=comp112701_c0_seq1.path1;Name=comp112701_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=791;mismatches=9;indels=8;unknowns=0;Target=comp112701_c0_seq1 334 301 .;locus=RLOC_00017652
Chr2	stalkie_big_nohaplotig	exon	58841401	58841872	97	-	.	Parent=comp112701_c0_seq1.mrna1;Target=comp112701_c0_seq1 864 397 .
Chr2	stalkie_big_nohaplotig	exon	58841879	58842212	98	-	.	Parent=comp112701_c0_seq1.mrna1;Target=comp112701_c0_seq1 334 1 .
Chr2	stalkie_big_nohaplotig	CDS	58841879	58841912	.	-	0	Parent=comp112701_c0_seq1.mrna1
Chr2	gffcl	locus	58883346	58884156	.	-	.	ID=RLOC_00017653;geneIDs=comp149764_c0_seq1.path1;transcripts=comp149764_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58883346	58884156	.	-	.	ID=comp149764_c0_seq1.mrna1;geneID=comp149764_c0_seq1.path1;Name=comp149764_c0_seq1;Dir=sensecoverage=97.1;identity=97.4;matches=721;mismatches=13;indels=6;unknowns=0;Target=comp149764_c0_seq1 1 102 +;locus=RLOC_00017653
Chr2	stalkie_big_nohaplotig	exon	58883346	58883622	100	-	.	Parent=comp149764_c0_seq1.mrna1;Target=comp149764_c0_seq1 463 739 +
Chr2	stalkie_big_nohaplotig	exon	58883699	58884156	95	-	.	Parent=comp149764_c0_seq1.mrna1;Target=comp149764_c0_seq1 1 462 +
Chr2	stalkie_big_nohaplotig	CDS	58884055	58884156	.	-	0	Parent=comp149764_c0_seq1.mrna1
Chr2	gffcl	locus	58975379	58976662	.	+	.	ID=RLOC_00017655;geneIDs=comp107597_c0_seq1.path1;transcripts=comp107597_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	58975379	58976662	.	+	.	ID=comp107597_c0_seq1.mrna1;geneID=comp107597_c0_seq1.path1;Name=comp107597_c0_seq1;Dir=indeterminatecoverage=97.0;identity=98.9;matches=1270;mismatches=14;indels=0;unknowns=0;Target=comp107597_c0_seq1 1305 22 .;CDS_Target=comp107597_c0_seq1 896 738 .;locus=RLOC_00017655
Chr2	stalkie_big_nohaplotig	exon	58975379	58976662	98	+	.	Parent=comp107597_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	58976095	58976253	.	+	0	Parent=comp107597_c0_seq1.mrna1
Chr2	gffcl	locus	59025743	59056744	.	+	.	ID=RLOC_00017657;geneIDs=comp156201_c0_seq1.path1;transcripts=comp156201_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59025743	59056744	.	+	.	ID=comp156201_c0_seq1.mrna1;geneID=comp156201_c0_seq1.path1;Name=comp156201_c0_seq1;Dir=indeterminatecoverage=56.7;identity=96.1;matches=983;mismatches=8;indels=32;unknowns=0;locus=RLOC_00017657
Chr2	stalkie_big_nohaplotig	exon	59025743	59025749	100	+	.	Parent=comp156201_c0_seq1.mrna1;Target=comp156201_c0_seq1 784 778 .
Chr2	stalkie_big_nohaplotig	exon	59027856	59027861	100	+	.	Parent=comp156201_c0_seq1.mrna1;Target=comp156201_c0_seq1 790 785 .
Chr2	stalkie_big_nohaplotig	exon	59039616	59039636	54	+	.	Parent=comp156201_c0_seq1.mrna1;Target=comp156201_c0_seq1 827 791 .
Chr2	stalkie_big_nohaplotig	exon	59040427	59040428	100	+	.	Parent=comp156201_c0_seq1.mrna1;Target=comp156201_c0_seq1 829 828 .
Chr2	stalkie_big_nohaplotig	exon	59043077	59043080	100	+	.	Parent=comp156201_c0_seq1.mrna1;Target=comp156201_c0_seq1 833 830 .
Chr2	stalkie_big_nohaplotig	exon	59049794	59049799	100	+	.	Parent=comp156201_c0_seq1.mrna1;Target=comp156201_c0_seq1 839 834 .
Chr2	stalkie_big_nohaplotig	exon	59051558	59051561	100	+	.	Parent=comp156201_c0_seq1.mrna1;Target=comp156201_c0_seq1 843 840 .
Chr2	stalkie_big_nohaplotig	exon	59052393	59052405	100	+	.	Parent=comp156201_c0_seq1.mrna1;Target=comp156201_c0_seq1 856 844 .
Chr2	stalkie_big_nohaplotig	exon	59055812	59056744	97	+	.	Parent=comp156201_c0_seq1.mrna1;Target=comp156201_c0_seq1 1795 857 .
Chr2	stalkie_big_nohaplotig	CDS	59025744	59025749	.	+	0	Parent=comp156201_c0_seq1.mrna1;Target=comp156201_c0_seq1 784 779 .
Chr2	stalkie_big_nohaplotig	CDS	59027856	59027861	.	+	0	Parent=comp156201_c0_seq1.mrna1;Target=comp156201_c0_seq1 790 785 .
Chr2	stalkie_big_nohaplotig	CDS	59039616	59039636	.	+	0	Parent=comp156201_c0_seq1.mrna1;Target=comp156201_c0_seq1 827 791 .
Chr2	stalkie_big_nohaplotig	CDS	59040427	59040428	.	+	0	Parent=comp156201_c0_seq1.mrna1;Target=comp156201_c0_seq1 829 828 .
Chr2	stalkie_big_nohaplotig	CDS	59043077	59043080	.	+	1	Parent=comp156201_c0_seq1.mrna1;Target=comp156201_c0_seq1 833 830 .
Chr2	stalkie_big_nohaplotig	CDS	59049794	59049799	.	+	0	Parent=comp156201_c0_seq1.mrna1;Target=comp156201_c0_seq1 839 834 .
Chr2	stalkie_big_nohaplotig	CDS	59051558	59051561	.	+	0	Parent=comp156201_c0_seq1.mrna1;Target=comp156201_c0_seq1 843 840 .
Chr2	stalkie_big_nohaplotig	CDS	59052393	59052405	.	+	2	Parent=comp156201_c0_seq1.mrna1;Target=comp156201_c0_seq1 856 844 .
Chr2	stalkie_big_nohaplotig	CDS	59055812	59055814	.	+	1	Parent=comp156201_c0_seq1.mrna1;Target=comp156201_c0_seq1 859 857 .
Chr2	gffcl	locus	59071233	59074769	.	+	.	ID=RLOC_00017658;geneIDs=FBgn0035050.1.path1;transcripts=FBgn0035050.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59071233	59074769	.	+	.	ID=FBgn0035050.1.mrna1;geneID=FBgn0035050.1.path1;Name=FBgn0035050.1;Dir=sensecoverage=100.0;identity=99.3;matches=1078;mismatches=8;indels=0;unknowns=0;locus=RLOC_00017658
Chr2	stalkie_big_nohaplotig	exon	59071233	59071680	98	+	.	Parent=FBgn0035050.1.mrna1;Target=FBgn0035050.1 1 448 +
Chr2	stalkie_big_nohaplotig	exon	59071740	59071837	98	+	.	Parent=FBgn0035050.1.mrna1;Target=FBgn0035050.1 449 546 +
Chr2	stalkie_big_nohaplotig	exon	59071965	59072244	99	+	.	Parent=FBgn0035050.1.mrna1;Target=FBgn0035050.1 547 826 +
Chr2	stalkie_big_nohaplotig	exon	59074238	59074335	100	+	.	Parent=FBgn0035050.1.mrna1;Target=FBgn0035050.1 827 924 +
Chr2	stalkie_big_nohaplotig	exon	59074608	59074769	100	+	.	Parent=FBgn0035050.1.mrna1;Target=FBgn0035050.1 925 1086 +
Chr2	stalkie_big_nohaplotig	CDS	59071233	59071680	.	+	0	Parent=FBgn0035050.1.mrna1;Target=FBgn0035050.1 1 448 +
Chr2	stalkie_big_nohaplotig	CDS	59071740	59071837	.	+	2	Parent=FBgn0035050.1.mrna1;Target=FBgn0035050.1 449 546 +
Chr2	stalkie_big_nohaplotig	CDS	59071965	59072244	.	+	0	Parent=FBgn0035050.1.mrna1;Target=FBgn0035050.1 547 826 +
Chr2	stalkie_big_nohaplotig	CDS	59074238	59074335	.	+	2	Parent=FBgn0035050.1.mrna1;Target=FBgn0035050.1 827 924 +
Chr2	stalkie_big_nohaplotig	CDS	59074608	59074769	.	+	0	Parent=FBgn0035050.1.mrna1;Target=FBgn0035050.1 925 1086 +
Chr2	gffcl	locus	59075026	59075361	.	+	.	ID=RLOC_00017659;geneIDs=comp134774_c0_seq1.path1;transcripts=comp134774_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59075026	59075361	.	+	.	ID=comp134774_c0_seq1.mrna1;geneID=comp134774_c0_seq1.path1;Name=comp134774_c0_seq1;Dir=indeterminatecoverage=99.5;identity=91.5;matches=332;mismatches=4;indels=27;unknowns=0;Target=comp134774_c0_seq1 365 3 .;CDS_Target=comp134774_c0_seq1 159 28 .;locus=RLOC_00017659
Chr2	stalkie_big_nohaplotig	exon	59075026	59075361	91	+	.	Parent=comp134774_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59075051	59075155	.	+	0	Parent=comp134774_c0_seq1.mrna1
Chr2	gffcl	locus	59098787	59099443	.	-	.	ID=RLOC_00017661;geneIDs=comp117982_c0_seq1.path1;transcripts=comp117982_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59098787	59099443	.	-	.	ID=comp117982_c0_seq1.mrna1;geneID=comp117982_c0_seq1.path1;Name=comp117982_c0_seq1;Dir=indeterminatecoverage=96.5;identity=99.8;matches=657;mismatches=0;indels=1;unknowns=0;Target=comp117982_c0_seq1 682 25 .;CDS_Target=comp117982_c0_seq1 140 27 .;locus=RLOC_00017661
Chr2	stalkie_big_nohaplotig	exon	59098787	59099443	99	-	.	Parent=comp117982_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59099328	59099441	.	-	0	Parent=comp117982_c0_seq1.mrna1
Chr2	gffcl	locus	59126613	59126798	.	+	.	ID=RLOC_00017662;geneIDs=FBgn0035049.1.path1;transcripts=FBgn0035049.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59126613	59126798	.	+	.	ID=FBgn0035049.1.mrna1;geneID=FBgn0035049.1.path1;Name=FBgn0035049.1;Dir=indeterminatecoverage=11.3;identity=100.0;matches=186;mismatches=0;indels=0;unknowns=0;Target=FBgn0035049.1 186 1 .;locus=RLOC_00017662
Chr2	stalkie_big_nohaplotig	exon	59126613	59126798	100	+	.	Parent=FBgn0035049.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59126613	59126798	.	+	0	Parent=FBgn0035049.1.mrna1
Chr2	gffcl	locus	59147982	59155120	.	+	.	ID=RLOC_00017663;geneIDs=FBgn0034068.1.path1;transcripts=FBgn0034068.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59147982	59155120	.	+	.	ID=FBgn0034068.1.mrna1;geneID=FBgn0034068.1.path1;Name=FBgn0034068.1;Dir=sensecoverage=100.0;identity=99.7;matches=1786;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017663
Chr2	stalkie_big_nohaplotig	exon	59147982	59148162	100	+	.	Parent=FBgn0034068.1.mrna1;Target=FBgn0034068.1 1 181 +
Chr2	stalkie_big_nohaplotig	exon	59148231	59148420	100	+	.	Parent=FBgn0034068.1.mrna1;Target=FBgn0034068.1 182 371 +
Chr2	stalkie_big_nohaplotig	exon	59148483	59148687	99	+	.	Parent=FBgn0034068.1.mrna1;Target=FBgn0034068.1 372 576 +
Chr2	stalkie_big_nohaplotig	exon	59148756	59148850	100	+	.	Parent=FBgn0034068.1.mrna1;Target=FBgn0034068.1 577 671 +
Chr2	stalkie_big_nohaplotig	exon	59148920	59149038	100	+	.	Parent=FBgn0034068.1.mrna1;Target=FBgn0034068.1 672 790 +
Chr2	stalkie_big_nohaplotig	exon	59149101	59149246	100	+	.	Parent=FBgn0034068.1.mrna1;Target=FBgn0034068.1 791 936 +
Chr2	stalkie_big_nohaplotig	exon	59149309	59149463	99	+	.	Parent=FBgn0034068.1.mrna1;Target=FBgn0034068.1 937 1091 +
Chr2	stalkie_big_nohaplotig	exon	59149536	59149684	100	+	.	Parent=FBgn0034068.1.mrna1;Target=FBgn0034068.1 1092 1240 +
Chr2	stalkie_big_nohaplotig	exon	59149744	59150018	99	+	.	Parent=FBgn0034068.1.mrna1;Target=FBgn0034068.1 1241 1515 +
Chr2	stalkie_big_nohaplotig	exon	59154777	59154896	99	+	.	Parent=FBgn0034068.1.mrna1;Target=FBgn0034068.1 1516 1635 +
Chr2	stalkie_big_nohaplotig	exon	59154965	59155120	100	+	.	Parent=FBgn0034068.1.mrna1;Target=FBgn0034068.1 1636 1791 +
Chr2	stalkie_big_nohaplotig	CDS	59147982	59148162	.	+	0	Parent=FBgn0034068.1.mrna1;Target=FBgn0034068.1 1 181 +
Chr2	stalkie_big_nohaplotig	CDS	59148231	59148420	.	+	2	Parent=FBgn0034068.1.mrna1;Target=FBgn0034068.1 182 371 +
Chr2	stalkie_big_nohaplotig	CDS	59148483	59148687	.	+	1	Parent=FBgn0034068.1.mrna1;Target=FBgn0034068.1 372 576 +
Chr2	stalkie_big_nohaplotig	CDS	59148756	59148850	.	+	0	Parent=FBgn0034068.1.mrna1;Target=FBgn0034068.1 577 671 +
Chr2	stalkie_big_nohaplotig	CDS	59148920	59149038	.	+	1	Parent=FBgn0034068.1.mrna1;Target=FBgn0034068.1 672 790 +
Chr2	stalkie_big_nohaplotig	CDS	59149101	59149246	.	+	2	Parent=FBgn0034068.1.mrna1;Target=FBgn0034068.1 791 936 +
Chr2	stalkie_big_nohaplotig	CDS	59149309	59149463	.	+	0	Parent=FBgn0034068.1.mrna1;Target=FBgn0034068.1 937 1091 +
Chr2	stalkie_big_nohaplotig	CDS	59149536	59149684	.	+	1	Parent=FBgn0034068.1.mrna1;Target=FBgn0034068.1 1092 1240 +
Chr2	stalkie_big_nohaplotig	CDS	59149744	59150018	.	+	2	Parent=FBgn0034068.1.mrna1;Target=FBgn0034068.1 1241 1515 +
Chr2	stalkie_big_nohaplotig	CDS	59154777	59154896	.	+	0	Parent=FBgn0034068.1.mrna1;Target=FBgn0034068.1 1516 1635 +
Chr2	stalkie_big_nohaplotig	CDS	59154965	59155120	.	+	0	Parent=FBgn0034068.1.mrna1;Target=FBgn0034068.1 1636 1791 +
Chr2	gffcl	locus	59155887	59158707	.	-	.	ID=RLOC_00017664;geneIDs=FBgn0034067.1.path1;transcripts=FBgn0034067.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59155887	59158707	.	-	.	ID=FBgn0034067.1.mrna1;geneID=FBgn0034067.1.path1;Name=FBgn0034067.1;Dir=sensecoverage=100.0;identity=99.3;matches=1922;mismatches=13;indels=0;unknowns=0;locus=RLOC_00017664
Chr2	stalkie_big_nohaplotig	exon	59155887	59156006	97	-	.	Parent=FBgn0034067.1.mrna1;Target=FBgn0034067.1 1816 1935 +
Chr2	stalkie_big_nohaplotig	exon	59156077	59156196	100	-	.	Parent=FBgn0034067.1.mrna1;Target=FBgn0034067.1 1696 1815 +
Chr2	stalkie_big_nohaplotig	exon	59156400	59156512	99	-	.	Parent=FBgn0034067.1.mrna1;Target=FBgn0034067.1 1583 1695 +
Chr2	stalkie_big_nohaplotig	exon	59156573	59156816	99	-	.	Parent=FBgn0034067.1.mrna1;Target=FBgn0034067.1 1339 1582 +
Chr2	stalkie_big_nohaplotig	exon	59156883	59157109	99	-	.	Parent=FBgn0034067.1.mrna1;Target=FBgn0034067.1 1112 1338 +
Chr2	stalkie_big_nohaplotig	exon	59157172	59157328	98	-	.	Parent=FBgn0034067.1.mrna1;Target=FBgn0034067.1 955 1111 +
Chr2	stalkie_big_nohaplotig	exon	59157564	59157715	100	-	.	Parent=FBgn0034067.1.mrna1;Target=FBgn0034067.1 803 954 +
Chr2	stalkie_big_nohaplotig	exon	59157779	59158101	100	-	.	Parent=FBgn0034067.1.mrna1;Target=FBgn0034067.1 480 802 +
Chr2	stalkie_big_nohaplotig	exon	59158165	59158322	99	-	.	Parent=FBgn0034067.1.mrna1;Target=FBgn0034067.1 322 479 +
Chr2	stalkie_big_nohaplotig	exon	59158387	59158707	99	-	.	Parent=FBgn0034067.1.mrna1;Target=FBgn0034067.1 1 321 +
Chr2	stalkie_big_nohaplotig	CDS	59155887	59156006	.	-	0	Parent=FBgn0034067.1.mrna1;Target=FBgn0034067.1 1816 1935 +
Chr2	stalkie_big_nohaplotig	CDS	59156077	59156196	.	-	0	Parent=FBgn0034067.1.mrna1;Target=FBgn0034067.1 1696 1815 +
Chr2	stalkie_big_nohaplotig	CDS	59156400	59156512	.	-	2	Parent=FBgn0034067.1.mrna1;Target=FBgn0034067.1 1583 1695 +
Chr2	stalkie_big_nohaplotig	CDS	59156573	59156816	.	-	0	Parent=FBgn0034067.1.mrna1;Target=FBgn0034067.1 1339 1582 +
Chr2	stalkie_big_nohaplotig	CDS	59156883	59157109	.	-	2	Parent=FBgn0034067.1.mrna1;Target=FBgn0034067.1 1112 1338 +
Chr2	stalkie_big_nohaplotig	CDS	59157172	59157328	.	-	0	Parent=FBgn0034067.1.mrna1;Target=FBgn0034067.1 955 1111 +
Chr2	stalkie_big_nohaplotig	CDS	59157564	59157715	.	-	2	Parent=FBgn0034067.1.mrna1;Target=FBgn0034067.1 803 954 +
Chr2	stalkie_big_nohaplotig	CDS	59157779	59158101	.	-	1	Parent=FBgn0034067.1.mrna1;Target=FBgn0034067.1 480 802 +
Chr2	stalkie_big_nohaplotig	CDS	59158165	59158322	.	-	0	Parent=FBgn0034067.1.mrna1;Target=FBgn0034067.1 322 479 +
Chr2	stalkie_big_nohaplotig	CDS	59158387	59158707	.	-	0	Parent=FBgn0034067.1.mrna1;Target=FBgn0034067.1 1 321 +
Chr2	gffcl	locus	59195443	59196360	.	+	.	ID=RLOC_00017665;geneIDs=FBgn0034066.1.path1;transcripts=FBgn0034066.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59195443	59196360	.	+	.	ID=FBgn0034066.1.mrna1;geneID=FBgn0034066.1.path1;Name=FBgn0034066.1;Dir=sensecoverage=100.0;identity=99.6;matches=741;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017665
Chr2	stalkie_big_nohaplotig	exon	59195443	59195808	99	+	.	Parent=FBgn0034066.1.mrna1;Target=FBgn0034066.1 1 366 +
Chr2	stalkie_big_nohaplotig	exon	59195865	59196011	100	+	.	Parent=FBgn0034066.1.mrna1;Target=FBgn0034066.1 367 513 +
Chr2	stalkie_big_nohaplotig	exon	59196072	59196200	100	+	.	Parent=FBgn0034066.1.mrna1;Target=FBgn0034066.1 514 642 +
Chr2	stalkie_big_nohaplotig	exon	59196259	59196360	100	+	.	Parent=FBgn0034066.1.mrna1;Target=FBgn0034066.1 643 744 +
Chr2	stalkie_big_nohaplotig	CDS	59195443	59195808	.	+	0	Parent=FBgn0034066.1.mrna1;Target=FBgn0034066.1 1 366 +
Chr2	stalkie_big_nohaplotig	CDS	59195865	59196011	.	+	0	Parent=FBgn0034066.1.mrna1;Target=FBgn0034066.1 367 513 +
Chr2	stalkie_big_nohaplotig	CDS	59196072	59196200	.	+	0	Parent=FBgn0034066.1.mrna1;Target=FBgn0034066.1 514 642 +
Chr2	stalkie_big_nohaplotig	CDS	59196259	59196360	.	+	0	Parent=FBgn0034066.1.mrna1;Target=FBgn0034066.1 643 744 +
Chr2	gffcl	locus	59196486	59197608	.	-	.	ID=RLOC_00017666;geneIDs=FBgn0034065.1.path1;transcripts=FBgn0034065.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59196486	59197608	.	-	.	ID=FBgn0034065.1.mrna1;geneID=FBgn0034065.1.path1;Name=FBgn0034065.1;Dir=sensecoverage=100.0;identity=99.7;matches=891;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017666
Chr2	stalkie_big_nohaplotig	exon	59196486	59196664	100	-	.	Parent=FBgn0034065.1.mrna1;Target=FBgn0034065.1 716 894 +
Chr2	stalkie_big_nohaplotig	exon	59196717	59197005	99	-	.	Parent=FBgn0034065.1.mrna1;Target=FBgn0034065.1 427 715 +
Chr2	stalkie_big_nohaplotig	exon	59197066	59197231	100	-	.	Parent=FBgn0034065.1.mrna1;Target=FBgn0034065.1 261 426 +
Chr2	stalkie_big_nohaplotig	exon	59197296	59197492	100	-	.	Parent=FBgn0034065.1.mrna1;Target=FBgn0034065.1 64 260 +
Chr2	stalkie_big_nohaplotig	exon	59197546	59197608	98	-	.	Parent=FBgn0034065.1.mrna1;Target=FBgn0034065.1 1 63 +
Chr2	stalkie_big_nohaplotig	CDS	59196486	59196664	.	-	2	Parent=FBgn0034065.1.mrna1;Target=FBgn0034065.1 716 894 +
Chr2	stalkie_big_nohaplotig	CDS	59196717	59197005	.	-	0	Parent=FBgn0034065.1.mrna1;Target=FBgn0034065.1 427 715 +
Chr2	stalkie_big_nohaplotig	CDS	59197066	59197231	.	-	1	Parent=FBgn0034065.1.mrna1;Target=FBgn0034065.1 261 426 +
Chr2	stalkie_big_nohaplotig	CDS	59197296	59197492	.	-	0	Parent=FBgn0034065.1.mrna1;Target=FBgn0034065.1 64 260 +
Chr2	stalkie_big_nohaplotig	CDS	59197546	59197608	.	-	0	Parent=FBgn0034065.1.mrna1;Target=FBgn0034065.1 1 63 +
Chr2	gffcl	locus	59215184	59216298	.	-	.	ID=RLOC_00017668;geneIDs=FBgn0026593.2.path1,FBgn0035309.1.path1;transcripts=FBgn0026593.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59215184	59216298	.	-	.	ID=FBgn0026593.2.mrna1;geneID=FBgn0026593.2.path1;Name=FBgn0026593.2;Dir=sensecoverage=100.0;identity=88.1;matches=928;mismatches=122;indels=3;unknowns=0;locus=RLOC_00017668
Chr2	stalkie_big_nohaplotig	exon	59215184	59216131	86	-	.	Parent=FBgn0026593.2.mrna1;Target=FBgn0026593.2 106 1050 +
Chr2	stalkie_big_nohaplotig	exon	59216194	59216298	99	-	.	Parent=FBgn0026593.2.mrna1;Target=FBgn0026593.2 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	59215184	59216131	.	-	0	Parent=FBgn0026593.2.mrna1;Target=FBgn0026593.2 106 1050 +
Chr2	stalkie_big_nohaplotig	CDS	59216194	59216298	.	-	0	Parent=FBgn0026593.2.mrna1;Target=FBgn0026593.2 1 105 +
Chr2	gffcl	locus	59222804	59223819	.	-	.	ID=RLOC_00017669;geneIDs=FBgn0026593.3.path1;transcripts=FBgn0026593.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59222804	59223819	.	-	.	ID=FBgn0026593.3.mrna1;geneID=FBgn0026593.3.path1;Name=FBgn0026593.3;Dir=sensecoverage=97.6;identity=97.6;matches=920;mismatches=23;indels=0;unknowns=0;locus=RLOC_00017669
Chr2	stalkie_big_nohaplotig	exon	59222804	59223725	97	-	.	Parent=FBgn0026593.3.mrna1;Target=FBgn0026593.3 22 943 +
Chr2	stalkie_big_nohaplotig	exon	59223799	59223819	100	-	.	Parent=FBgn0026593.3.mrna1;Target=FBgn0026593.3 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	59222805	59223725	.	-	0	Parent=FBgn0026593.3.mrna1;Target=FBgn0026593.3 22 942 +
Chr2	stalkie_big_nohaplotig	CDS	59223799	59223819	.	-	0	Parent=FBgn0026593.3.mrna1;Target=FBgn0026593.3 1 21 +
Chr2	gffcl	locus	59222970	59287601	.	+	.	ID=RLOC_00017670;geneIDs=comp161524_c0_seq1.path1;transcripts=comp161524_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59222970	59287601	.	+	.	ID=comp161524_c0_seq1.mrna1;geneID=comp161524_c0_seq1.path1;Name=comp161524_c0_seq1;Dir=indeterminatecoverage=60.6;identity=80.7;matches=763;mismatches=135;indels=48;unknowns=0;Target=comp161524_c0_seq1 961 932 .;locus=RLOC_00017670
Chr2	stalkie_big_nohaplotig	exon	59222970	59223706	83	+	.	Parent=comp161524_c0_seq1.mrna1;Target=comp161524_c0_seq1 1102 366 .
Chr2	stalkie_big_nohaplotig	exon	59231012	59231018	100	+	.	Parent=comp161524_c0_seq1.mrna1;Target=comp161524_c0_seq1 1122 1116 .
Chr2	stalkie_big_nohaplotig	exon	59232540	59232544	100	+	.	Parent=comp161524_c0_seq1.mrna1;Target=comp161524_c0_seq1 1127 1123 .
Chr2	stalkie_big_nohaplotig	exon	59239152	59239154	100	+	.	Parent=comp161524_c0_seq1.mrna1;Target=comp161524_c0_seq1 1130 1128 .
Chr2	stalkie_big_nohaplotig	exon	59245939	59245947	100	+	.	Parent=comp161524_c0_seq1.mrna1;Target=comp161524_c0_seq1 1139 1131 .
Chr2	stalkie_big_nohaplotig	exon	59252061	59252070	100	+	.	Parent=comp161524_c0_seq1.mrna1;Target=comp161524_c0_seq1 1149 1140 .
Chr2	stalkie_big_nohaplotig	exon	59252091	59252096	100	+	.	Parent=comp161524_c0_seq1.mrna1;Target=comp161524_c0_seq1 1183 1178 .
Chr2	stalkie_big_nohaplotig	exon	59256379	59256385	100	+	.	Parent=comp161524_c0_seq1.mrna1;Target=comp161524_c0_seq1 1190 1184 .
Chr2	stalkie_big_nohaplotig	exon	59258304	59258311	100	+	.	Parent=comp161524_c0_seq1.mrna1;Target=comp161524_c0_seq1 1198 1191 .
Chr2	stalkie_big_nohaplotig	exon	59258331	59258388	17	+	.	Parent=comp161524_c0_seq1.mrna1;Target=comp161524_c0_seq1 1245 1236 .
Chr2	stalkie_big_nohaplotig	exon	59262353	59262361	100	+	.	Parent=comp161524_c0_seq1.mrna1;Target=comp161524_c0_seq1 1254 1246 .
Chr2	stalkie_big_nohaplotig	exon	59262368	59262369	100	+	.	Parent=comp161524_c0_seq1.mrna1;Target=comp161524_c0_seq1 1277 1276 .
Chr2	stalkie_big_nohaplotig	exon	59262849	59262851	100	+	.	Parent=comp161524_c0_seq1.mrna1;Target=comp161524_c0_seq1 1280 1278 .
Chr2	stalkie_big_nohaplotig	exon	59267029	59267033	100	+	.	Parent=comp161524_c0_seq1.mrna1;Target=comp161524_c0_seq1 1285 1281 .
Chr2	stalkie_big_nohaplotig	exon	59272114	59272124	100	+	.	Parent=comp161524_c0_seq1.mrna1;Target=comp161524_c0_seq1 1296 1286 .
Chr2	stalkie_big_nohaplotig	exon	59273572	59273605	58	+	.	Parent=comp161524_c0_seq1.mrna1;Target=comp161524_c0_seq1 1347 1314 .
Chr2	stalkie_big_nohaplotig	exon	59277356	59277365	100	+	.	Parent=comp161524_c0_seq1.mrna1;Target=comp161524_c0_seq1 1357 1348 .
Chr2	stalkie_big_nohaplotig	exon	59278533	59278540	100	+	.	Parent=comp161524_c0_seq1.mrna1;Target=comp161524_c0_seq1 1368 1361 .
Chr2	stalkie_big_nohaplotig	exon	59280676	59280683	100	+	.	Parent=comp161524_c0_seq1.mrna1;Target=comp161524_c0_seq1 1422 1415 .
Chr2	stalkie_big_nohaplotig	exon	59287598	59287601	100	+	.	Parent=comp161524_c0_seq1.mrna1;Target=comp161524_c0_seq1 1426 1423 .
Chr2	stalkie_big_nohaplotig	CDS	59223536	59223565	.	+	0	Parent=comp161524_c0_seq1.mrna1
Chr2	gffcl	locus	59225921	59226874	.	+	.	ID=RLOC_00017671;geneIDs=FBgn0010590.2.path1;transcripts=FBgn0010590.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59225921	59226874	.	+	.	ID=FBgn0010590.2.mrna1;geneID=FBgn0010590.2.path1;Name=FBgn0010590.2;Dir=sensecoverage=100.0;identity=99.6;matches=831;mismatches=2;indels=1;unknowns=0;locus=RLOC_00017671
Chr2	stalkie_big_nohaplotig	exon	59225921	59226120	99	+	.	Parent=FBgn0010590.2.mrna1;Target=FBgn0010590.2 1 201 +
Chr2	stalkie_big_nohaplotig	exon	59226179	59226653	100	+	.	Parent=FBgn0010590.2.mrna1;Target=FBgn0010590.2 202 676 +
Chr2	stalkie_big_nohaplotig	exon	59226717	59226874	99	+	.	Parent=FBgn0010590.2.mrna1;Target=FBgn0010590.2 677 834 +
Chr2	stalkie_big_nohaplotig	CDS	59226076	59226120	.	+	0	Parent=FBgn0010590.2.mrna1;Target=FBgn0010590.2 157 201 +
Chr2	stalkie_big_nohaplotig	CDS	59226179	59226653	.	+	0	Parent=FBgn0010590.2.mrna1;Target=FBgn0010590.2 202 676 +
Chr2	stalkie_big_nohaplotig	CDS	59226717	59226874	.	+	2	Parent=FBgn0010590.2.mrna1;Target=FBgn0010590.2 677 834 +
Chr2	gffcl	locus	59228014	59229800	.	-	.	ID=RLOC_00017672;geneIDs=FBgn0034063.1.path1;transcripts=FBgn0034063.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59228014	59229800	.	-	.	ID=FBgn0034063.1.mrna1;geneID=FBgn0034063.1.path1;Name=FBgn0034063.1;Dir=sensecoverage=100.0;identity=99.5;matches=1468;mismatches=8;indels=0;unknowns=0;locus=RLOC_00017672
Chr2	stalkie_big_nohaplotig	exon	59228014	59228405	99	-	.	Parent=FBgn0034063.1.mrna1;Target=FBgn0034063.1 1085 1476 +
Chr2	stalkie_big_nohaplotig	exon	59228467	59228632	100	-	.	Parent=FBgn0034063.1.mrna1;Target=FBgn0034063.1 919 1084 +
Chr2	stalkie_big_nohaplotig	exon	59228694	59229026	99	-	.	Parent=FBgn0034063.1.mrna1;Target=FBgn0034063.1 586 918 +
Chr2	stalkie_big_nohaplotig	exon	59229093	59229299	99	-	.	Parent=FBgn0034063.1.mrna1;Target=FBgn0034063.1 379 585 +
Chr2	stalkie_big_nohaplotig	exon	59229362	59229628	100	-	.	Parent=FBgn0034063.1.mrna1;Target=FBgn0034063.1 112 378 +
Chr2	stalkie_big_nohaplotig	exon	59229690	59229800	99	-	.	Parent=FBgn0034063.1.mrna1;Target=FBgn0034063.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	59228014	59228405	.	-	2	Parent=FBgn0034063.1.mrna1;Target=FBgn0034063.1 1085 1476 +
Chr2	stalkie_big_nohaplotig	CDS	59228467	59228632	.	-	0	Parent=FBgn0034063.1.mrna1;Target=FBgn0034063.1 919 1084 +
Chr2	stalkie_big_nohaplotig	CDS	59228694	59229026	.	-	0	Parent=FBgn0034063.1.mrna1;Target=FBgn0034063.1 586 918 +
Chr2	stalkie_big_nohaplotig	CDS	59229093	59229299	.	-	0	Parent=FBgn0034063.1.mrna1;Target=FBgn0034063.1 379 585 +
Chr2	stalkie_big_nohaplotig	CDS	59229362	59229628	.	-	0	Parent=FBgn0034063.1.mrna1;Target=FBgn0034063.1 112 378 +
Chr2	stalkie_big_nohaplotig	CDS	59229690	59229800	.	-	0	Parent=FBgn0034063.1.mrna1;Target=FBgn0034063.1 1 111 +
Chr2	gffcl	locus	59235345	59235594	.	-	.	ID=RLOC_00017673;geneIDs=comp646688_c0_seq1.path1;transcripts=comp646688_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59235345	59235594	.	-	.	ID=comp646688_c0_seq1.mrna1;geneID=comp646688_c0_seq1.path1;Name=comp646688_c0_seq1;Dir=indeterminatecoverage=91.2;identity=99.2;matches=248;mismatches=2;indels=0;unknowns=0;Target=comp646688_c0_seq1 274 25 .;CDS_Target=comp646688_c0_seq1 221 153 .;locus=RLOC_00017673
Chr2	stalkie_big_nohaplotig	exon	59235345	59235594	99	-	.	Parent=comp646688_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59235398	59235466	.	-	0	Parent=comp646688_c0_seq1.mrna1
Chr2	gffcl	locus	59240686	59240965	.	+	.	ID=RLOC_00017674;geneIDs=comp117477_c0_seq1.path1;transcripts=comp117477_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59240686	59240965	.	+	.	ID=comp117477_c0_seq1.mrna1;geneID=comp117477_c0_seq1.path1;Name=comp117477_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=280;mismatches=0;indels=0;unknowns=0;Target=comp117477_c0_seq1 280 1 .;CDS_Target=comp117477_c0_seq1 74 3 .;locus=RLOC_00017674
Chr2	stalkie_big_nohaplotig	exon	59240686	59240965	100	+	.	Parent=comp117477_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59240688	59240759	.	+	0	Parent=comp117477_c0_seq1.mrna1
Chr2	gffcl	locus	59242754	59243420	.	+	.	ID=RLOC_00017675;geneIDs=comp160020_c0_seq1.path1;transcripts=comp160020_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59242754	59243420	.	+	.	ID=comp160020_c0_seq1.mrna1;geneID=comp160020_c0_seq1.path1;Name=comp160020_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=661;mismatches=5;indels=5;unknowns=0;Target=comp160020_c0_seq1 670 1 .;CDS_Target=comp160020_c0_seq1 336 277 .;locus=RLOC_00017675
Chr2	stalkie_big_nohaplotig	exon	59242754	59243420	98	+	.	Parent=comp160020_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59243029	59243088	.	+	0	Parent=comp160020_c0_seq1.mrna1
Chr2	gffcl	locus	59244021	59265707	.	-	.	ID=RLOC_00017676;geneIDs=FBgn0033639.1.path1;transcripts=FBgn0033639.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59244021	59265707	.	-	.	ID=FBgn0033639.1.mrna1;geneID=FBgn0033639.1.path1;Name=FBgn0033639.1;Dir=sensecoverage=98.4;identity=99.9;matches=1578;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017676
Chr2	stalkie_big_nohaplotig	exon	59244021	59244125	100	-	.	Parent=FBgn0033639.1.mrna1;Target=FBgn0033639.1 1501 1605 +
Chr2	stalkie_big_nohaplotig	exon	59244198	59244410	100	-	.	Parent=FBgn0033639.1.mrna1;Target=FBgn0033639.1 1288 1500 +
Chr2	stalkie_big_nohaplotig	exon	59244478	59244771	99	-	.	Parent=FBgn0033639.1.mrna1;Target=FBgn0033639.1 994 1287 +
Chr2	stalkie_big_nohaplotig	exon	59244830	59245018	100	-	.	Parent=FBgn0033639.1.mrna1;Target=FBgn0033639.1 805 993 +
Chr2	stalkie_big_nohaplotig	exon	59249408	59249585	100	-	.	Parent=FBgn0033639.1.mrna1;Target=FBgn0033639.1 627 804 +
Chr2	stalkie_big_nohaplotig	exon	59249649	59249743	100	-	.	Parent=FBgn0033639.1.mrna1;Target=FBgn0033639.1 532 626 +
Chr2	stalkie_big_nohaplotig	exon	59249812	59249895	100	-	.	Parent=FBgn0033639.1.mrna1;Target=FBgn0033639.1 448 531 +
Chr2	stalkie_big_nohaplotig	exon	59258698	59258814	100	-	.	Parent=FBgn0033639.1.mrna1;Target=FBgn0033639.1 331 447 +
Chr2	stalkie_big_nohaplotig	exon	59265404	59265707	100	-	.	Parent=FBgn0033639.1.mrna1;Target=FBgn0033639.1 27 330 +
Chr2	stalkie_big_nohaplotig	CDS	59244021	59244125	.	-	0	Parent=FBgn0033639.1.mrna1;Target=FBgn0033639.1 1501 1605 +
Chr2	stalkie_big_nohaplotig	CDS	59244198	59244410	.	-	0	Parent=FBgn0033639.1.mrna1;Target=FBgn0033639.1 1288 1500 +
Chr2	stalkie_big_nohaplotig	CDS	59244478	59244771	.	-	0	Parent=FBgn0033639.1.mrna1;Target=FBgn0033639.1 994 1287 +
Chr2	stalkie_big_nohaplotig	CDS	59244830	59245018	.	-	0	Parent=FBgn0033639.1.mrna1;Target=FBgn0033639.1 805 993 +
Chr2	stalkie_big_nohaplotig	CDS	59249408	59249585	.	-	1	Parent=FBgn0033639.1.mrna1;Target=FBgn0033639.1 627 804 +
Chr2	stalkie_big_nohaplotig	CDS	59249649	59249743	.	-	0	Parent=FBgn0033639.1.mrna1;Target=FBgn0033639.1 532 626 +
Chr2	stalkie_big_nohaplotig	CDS	59249812	59249895	.	-	0	Parent=FBgn0033639.1.mrna1;Target=FBgn0033639.1 448 531 +
Chr2	stalkie_big_nohaplotig	CDS	59258698	59258814	.	-	0	Parent=FBgn0033639.1.mrna1;Target=FBgn0033639.1 331 447 +
Chr2	stalkie_big_nohaplotig	CDS	59265404	59265706	.	-	0	Parent=FBgn0033639.1.mrna1;Target=FBgn0033639.1 28 330 +
Chr2	gffcl	locus	59294765	59295001	.	-	.	ID=RLOC_00017677;geneIDs=comp135834_c0_seq1.path1;transcripts=comp135834_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59294765	59295001	.	-	.	ID=comp135834_c0_seq1.mrna1;geneID=comp135834_c0_seq1.path1;Name=comp135834_c0_seq1;Dir=indeterminatecoverage=97.1;identity=91.1;matches=216;mismatches=20;indels=1;unknowns=0;Target=comp135834_c0_seq1 236 1 .;CDS_Target=comp135834_c0_seq1 67 2 .;locus=RLOC_00017677
Chr2	stalkie_big_nohaplotig	exon	59294765	59295001	91	-	.	Parent=comp135834_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59294935	59295000	.	-	0	Parent=comp135834_c0_seq1.mrna1
Chr2	gffcl	locus	59295559	59299514	.	+	.	ID=RLOC_00017678;geneIDs=FBgn0004687.1.path1;transcripts=FBgn0004687.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59295559	59299514	.	+	.	ID=FBgn0004687.1.mrna1;geneID=FBgn0004687.1.path1;Name=FBgn0004687.1;Dir=sensecoverage=98.9;identity=100.0;matches=439;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017678
Chr2	stalkie_big_nohaplotig	exon	59295559	59295587	100	+	.	Parent=FBgn0004687.1.mrna1;Target=FBgn0004687.1 6 34 +
Chr2	stalkie_big_nohaplotig	exon	59299105	59299514	100	+	.	Parent=FBgn0004687.1.mrna1;Target=FBgn0004687.1 35 444 +
Chr2	stalkie_big_nohaplotig	CDS	59295560	59295587	.	+	0	Parent=FBgn0004687.1.mrna1;Target=FBgn0004687.1 7 34 +
Chr2	stalkie_big_nohaplotig	CDS	59299105	59299514	.	+	2	Parent=FBgn0004687.1.mrna1;Target=FBgn0004687.1 35 444 +
Chr2	gffcl	locus	59295564	59299152	.	-	.	ID=RLOC_00017679;geneIDs=comp156954_c0_seq1.path1;transcripts=comp156954_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59295564	59299152	.	-	.	ID=comp156954_c0_seq1.mrna1;geneID=comp156954_c0_seq1.path1;Name=comp156954_c0_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=958;mismatches=6;indels=1;unknowns=0;Target=comp156954_c0_seq1 515 625 .;locus=RLOC_00017679
Chr2	stalkie_big_nohaplotig	exon	59295564	59295610	100	-	.	Parent=comp156954_c0_seq1.mrna1;Target=comp156954_c0_seq1 1 47 -
Chr2	stalkie_big_nohaplotig	exon	59298236	59299152	99	-	.	Parent=comp156954_c0_seq1.mrna1;Target=comp156954_c0_seq1 48 965 -
Chr2	stalkie_big_nohaplotig	CDS	59298703	59298813	.	-	0	Parent=comp156954_c0_seq1.mrna1
Chr2	gffcl	locus	59299963	59301459	.	-	.	ID=RLOC_00017680;geneIDs=FBgn0046692.1.path1;transcripts=FBgn0046692.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59299963	59301459	.	-	.	ID=FBgn0046692.1.mrna1;geneID=FBgn0046692.1.path1;Name=FBgn0046692.1;Dir=sensecoverage=100.0;identity=99.5;matches=1066;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017680
Chr2	stalkie_big_nohaplotig	exon	59299963	59300030	100	-	.	Parent=FBgn0046692.1.mrna1;Target=FBgn0046692.1 1004 1071 +
Chr2	stalkie_big_nohaplotig	exon	59300097	59300345	99	-	.	Parent=FBgn0046692.1.mrna1;Target=FBgn0046692.1 755 1003 +
Chr2	stalkie_big_nohaplotig	exon	59300633	59301070	99	-	.	Parent=FBgn0046692.1.mrna1;Target=FBgn0046692.1 317 754 +
Chr2	stalkie_big_nohaplotig	exon	59301144	59301459	99	-	.	Parent=FBgn0046692.1.mrna1;Target=FBgn0046692.1 1 316 +
Chr2	stalkie_big_nohaplotig	CDS	59299963	59300030	.	-	2	Parent=FBgn0046692.1.mrna1;Target=FBgn0046692.1 1004 1071 +
Chr2	stalkie_big_nohaplotig	CDS	59300097	59300345	.	-	2	Parent=FBgn0046692.1.mrna1;Target=FBgn0046692.1 755 1003 +
Chr2	stalkie_big_nohaplotig	CDS	59300633	59301070	.	-	2	Parent=FBgn0046692.1.mrna1;Target=FBgn0046692.1 317 754 +
Chr2	stalkie_big_nohaplotig	CDS	59301144	59301459	.	-	0	Parent=FBgn0046692.1.mrna1;Target=FBgn0046692.1 1 316 +
Chr2	gffcl	locus	59306497	59310580	.	+	.	ID=RLOC_00017681;geneIDs=FBgn0035689.1.path1;transcripts=FBgn0035689.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59306497	59310580	.	+	.	ID=FBgn0035689.1.mrna1;geneID=FBgn0035689.1.path1;Name=FBgn0035689.1;Dir=sensecoverage=100.0;identity=99.1;matches=2679;mismatches=23;indels=0;unknowns=0;locus=RLOC_00017681
Chr2	stalkie_big_nohaplotig	exon	59306497	59306635	98	+	.	Parent=FBgn0035689.1.mrna1;Target=FBgn0035689.1 1 139 +
Chr2	stalkie_big_nohaplotig	exon	59306696	59307931	99	+	.	Parent=FBgn0035689.1.mrna1;Target=FBgn0035689.1 140 1375 +
Chr2	stalkie_big_nohaplotig	exon	59307995	59308398	98	+	.	Parent=FBgn0035689.1.mrna1;Target=FBgn0035689.1 1376 1779 +
Chr2	stalkie_big_nohaplotig	exon	59308501	59308690	100	+	.	Parent=FBgn0035689.1.mrna1;Target=FBgn0035689.1 1780 1969 +
Chr2	stalkie_big_nohaplotig	exon	59308741	59308843	99	+	.	Parent=FBgn0035689.1.mrna1;Target=FBgn0035689.1 1970 2072 +
Chr2	stalkie_big_nohaplotig	exon	59309889	59310438	99	+	.	Parent=FBgn0035689.1.mrna1;Target=FBgn0035689.1 2073 2622 +
Chr2	stalkie_big_nohaplotig	exon	59310501	59310580	100	+	.	Parent=FBgn0035689.1.mrna1;Target=FBgn0035689.1 2623 2702 +
Chr2	stalkie_big_nohaplotig	CDS	59306497	59306635	.	+	0	Parent=FBgn0035689.1.mrna1;Target=FBgn0035689.1 1 139 +
Chr2	stalkie_big_nohaplotig	CDS	59306696	59307931	.	+	2	Parent=FBgn0035689.1.mrna1;Target=FBgn0035689.1 140 1375 +
Chr2	stalkie_big_nohaplotig	CDS	59307995	59308398	.	+	2	Parent=FBgn0035689.1.mrna1;Target=FBgn0035689.1 1376 1779 +
Chr2	stalkie_big_nohaplotig	CDS	59308501	59308690	.	+	0	Parent=FBgn0035689.1.mrna1;Target=FBgn0035689.1 1780 1969 +
Chr2	stalkie_big_nohaplotig	CDS	59308741	59308843	.	+	2	Parent=FBgn0035689.1.mrna1;Target=FBgn0035689.1 1970 2072 +
Chr2	stalkie_big_nohaplotig	CDS	59309889	59310438	.	+	1	Parent=FBgn0035689.1.mrna1;Target=FBgn0035689.1 2073 2622 +
Chr2	stalkie_big_nohaplotig	CDS	59310501	59310578	.	+	0	Parent=FBgn0035689.1.mrna1;Target=FBgn0035689.1 2623 2700 +
Chr2	gffcl	locus	59318595	59319089	.	-	.	ID=RLOC_00017682;geneIDs=comp146468_c0_seq1.path1;transcripts=comp146468_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59318595	59319089	.	-	.	ID=comp146468_c0_seq1.mrna1;geneID=comp146468_c0_seq1.path1;Name=comp146468_c0_seq1;Dir=indeterminatecoverage=99.2;identity=98.4;matches=491;mismatches=4;indels=4;unknowns=0;Target=comp146468_c0_seq1 502 4 .;CDS_Target=comp146468_c0_seq1 333 61 .;locus=RLOC_00017682
Chr2	stalkie_big_nohaplotig	exon	59318595	59319089	98	-	.	Parent=comp146468_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59318760	59319032	.	-	0	Parent=comp146468_c0_seq1.mrna1
Chr2	gffcl	locus	59319814	61259820	.	-	.	ID=RLOC_00017683;geneIDs=FBgn0035049.1.path2,comp160191_c0_seq1.path1;transcripts=FBgn0035049.1.mrna2,comp160191_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59319814	59327353	.	-	.	ID=FBgn0035049.1.mrna2;geneID=FBgn0035049.1.path2;Name=FBgn0035049.1;Dir=sensecoverage=88.7;identity=99.6;matches=1452;mismatches=6;indels=0;unknowns=0;locus=RLOC_00017683
Chr2	stalkie_big_nohaplotig	exon	59319814	59319875	100	-	.	Parent=FBgn0035049.1.mrna2;Target=FBgn0035049.1 1583 1644 +
Chr2	stalkie_big_nohaplotig	exon	59325731	59325809	100	-	.	Parent=FBgn0035049.1.mrna2;Target=FBgn0035049.1 1504 1582 +
Chr2	stalkie_big_nohaplotig	exon	59325877	59326253	99	-	.	Parent=FBgn0035049.1.mrna2;Target=FBgn0035049.1 1127 1503 +
Chr2	stalkie_big_nohaplotig	exon	59326322	59326854	99	-	.	Parent=FBgn0035049.1.mrna2;Target=FBgn0035049.1 594 1126 +
Chr2	stalkie_big_nohaplotig	exon	59326947	59327353	99	-	.	Parent=FBgn0035049.1.mrna2;Target=FBgn0035049.1 187 593 +
Chr2	stalkie_big_nohaplotig	CDS	59319814	59319875	.	-	2	Parent=FBgn0035049.1.mrna2;Target=FBgn0035049.1 1583 1644 +
Chr2	stalkie_big_nohaplotig	CDS	59325731	59325809	.	-	0	Parent=FBgn0035049.1.mrna2;Target=FBgn0035049.1 1504 1582 +
Chr2	stalkie_big_nohaplotig	CDS	59325877	59326253	.	-	2	Parent=FBgn0035049.1.mrna2;Target=FBgn0035049.1 1127 1503 +
Chr2	stalkie_big_nohaplotig	CDS	59326322	59326854	.	-	1	Parent=FBgn0035049.1.mrna2;Target=FBgn0035049.1 594 1126 +
Chr2	stalkie_big_nohaplotig	CDS	59326947	59327353	.	-	0	Parent=FBgn0035049.1.mrna2;Target=FBgn0035049.1 187 593 +
Chr2	stalkie_big_nohaplotig	mRNA	59325731	61259820	.	-	.	ID=comp160191_c0_seq1.mrna1;geneID=comp160191_c0_seq1.path1;Name=comp160191_c0_seq1;Dir=antisensecoverage=85.4;identity=93.1;matches=1722;mismatches=94;indels=33;unknowns=0;locus=RLOC_00017683
Chr2	stalkie_big_nohaplotig	exon	59325731	59325809	100	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 1 79 -
Chr2	stalkie_big_nohaplotig	exon	59325877	59326253	99	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 80 456 -
Chr2	stalkie_big_nohaplotig	exon	59326322	59326854	99	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 457 989 -
Chr2	stalkie_big_nohaplotig	exon	59326947	59327335	99	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 990 1378 -
Chr2	stalkie_big_nohaplotig	exon	61083282	61083284	100	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 1379 1381 -
Chr2	stalkie_big_nohaplotig	exon	61094816	61094822	100	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 1382 1388 -
Chr2	stalkie_big_nohaplotig	exon	61098236	61098243	100	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 1389 1396 -
Chr2	stalkie_big_nohaplotig	exon	61098268	61098276	100	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 1449 1457 -
Chr2	stalkie_big_nohaplotig	exon	61116234	61116248	66	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 1483 1496 -
Chr2	stalkie_big_nohaplotig	exon	61127468	61127479	66	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 1497 1508 -
Chr2	stalkie_big_nohaplotig	exon	61131023	61131031	100	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 1509 1517 -
Chr2	stalkie_big_nohaplotig	exon	61131839	61131848	90	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 1518 1527 -
Chr2	stalkie_big_nohaplotig	exon	61154123	61154169	60	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 1528 1570 -
Chr2	stalkie_big_nohaplotig	exon	61170272	61170279	87	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 1571 1578 -
Chr2	stalkie_big_nohaplotig	exon	61174592	61174602	90	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 1579 1589 -
Chr2	stalkie_big_nohaplotig	exon	61182057	61182065	100	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 1657 1665 -
Chr2	stalkie_big_nohaplotig	exon	61198984	61198992	100	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 1666 1674 -
Chr2	stalkie_big_nohaplotig	exon	61214823	61214833	63	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 1675 1683 -
Chr2	stalkie_big_nohaplotig	exon	61219070	61219077	100	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 1684 1691 -
Chr2	stalkie_big_nohaplotig	exon	61219090	61219100	100	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 1741 1751 -
Chr2	stalkie_big_nohaplotig	exon	61223899	61223909	100	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 1820 1830 -
Chr2	stalkie_big_nohaplotig	exon	61229479	61229495	64	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 1912 1924 -
Chr2	stalkie_big_nohaplotig	exon	61235109	61235130	46	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 1925 1952 -
Chr2	stalkie_big_nohaplotig	exon	61237109	61237118	100	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 1953 1962 -
Chr2	stalkie_big_nohaplotig	exon	61238057	61238068	83	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 1997 2008 -
Chr2	stalkie_big_nohaplotig	exon	61238073	61238083	100	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 2048 2058 -
Chr2	stalkie_big_nohaplotig	exon	61240573	61240597	51	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 2059 2089 -
Chr2	stalkie_big_nohaplotig	exon	61244861	61244870	100	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 2090 2099 -
Chr2	stalkie_big_nohaplotig	exon	61248238	61248344	57	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 2138 2236 -
Chr2	stalkie_big_nohaplotig	exon	61249028	61249036	100	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 2249 2257 -
Chr2	stalkie_big_nohaplotig	exon	61254004	61254009	100	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 2258 2263 -
Chr2	stalkie_big_nohaplotig	exon	61254224	61254240	88	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 2264 2280 -
Chr2	stalkie_big_nohaplotig	exon	61259811	61259820	100	-	.	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 2281 2290 -
Chr2	stalkie_big_nohaplotig	CDS	59325732	59325809	.	-	0	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 2 79 .
Chr2	stalkie_big_nohaplotig	CDS	59325877	59326253	.	-	2	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 80 456 .
Chr2	stalkie_big_nohaplotig	CDS	59326322	59326854	.	-	1	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 457 989 .
Chr2	stalkie_big_nohaplotig	CDS	59326947	59327194	.	-	0	Parent=comp160191_c0_seq1.mrna1;Target=comp160191_c0_seq1 990 1237 .
Chr2	gffcl	locus	59320416	59321058	.	-	.	ID=RLOC_00017684;geneIDs=comp151075_c0_seq1.path1;transcripts=comp151075_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59320416	59321058	.	-	.	ID=comp151075_c0_seq1.mrna1;geneID=comp151075_c0_seq1.path1;Name=comp151075_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=636;mismatches=7;indels=7;unknowns=0;Target=comp151075_c0_seq1 650 1 .;CDS_Target=comp151075_c0_seq1 127 2 .;locus=RLOC_00017684
Chr2	stalkie_big_nohaplotig	exon	59320416	59321058	97	-	.	Parent=comp151075_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59320938	59321057	.	-	0	Parent=comp151075_c0_seq1.mrna1
Chr2	gffcl	locus	59322219	59322769	.	-	.	ID=RLOC_00017685;geneIDs=comp152898_c0_seq1.path1;transcripts=comp152898_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59322219	59322769	.	-	.	ID=comp152898_c0_seq1.mrna1;geneID=comp152898_c0_seq1.path1;Name=comp152898_c0_seq1;Dir=indeterminatecoverage=91.1;identity=96.4;matches=533;mismatches=17;indels=3;unknowns=0;Target=comp152898_c0_seq1 606 55 .;CDS_Target=comp152898_c0_seq1 571 485 .;locus=RLOC_00017685
Chr2	stalkie_big_nohaplotig	exon	59322219	59322769	96	-	.	Parent=comp152898_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59322255	59322341	.	-	0	Parent=comp152898_c0_seq1.mrna1
Chr2	gffcl	locus	59363158	59363890	.	+	.	ID=RLOC_00017686;geneIDs=comp151186_c0_seq1.path1;transcripts=comp151186_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59363158	59363890	.	+	.	ID=comp151186_c0_seq1.mrna1;geneID=comp151186_c0_seq1.path1;Name=comp151186_c0_seq1;Dir=antisensecoverage=96.8;identity=98.2;matches=660;mismatches=12;indels=0;unknowns=0;Target=comp151186_c0_seq1 457 672 .;locus=RLOC_00017686
Chr2	stalkie_big_nohaplotig	exon	59363158	59363424	98	+	.	Parent=comp151186_c0_seq1.mrna1;Target=comp151186_c0_seq1 406 672 -
Chr2	stalkie_big_nohaplotig	exon	59363486	59363890	98	+	.	Parent=comp151186_c0_seq1.mrna1;Target=comp151186_c0_seq1 1 405 -
Chr2	stalkie_big_nohaplotig	CDS	59363158	59363373	.	+	0	Parent=comp151186_c0_seq1.mrna1
Chr2	gffcl	locus	59389119	59403825	.	+	.	ID=RLOC_00017687;geneIDs=FBgn0034070.1.path1;transcripts=FBgn0034070.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59389119	59403825	.	+	.	ID=FBgn0034070.1.mrna1;geneID=FBgn0034070.1.path1;Name=FBgn0034070.1;Dir=sensecoverage=100.0;identity=99.7;matches=4197;mismatches=12;indels=0;unknowns=0;locus=RLOC_00017687
Chr2	stalkie_big_nohaplotig	exon	59389119	59389266	100	+	.	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 1 148 +
Chr2	stalkie_big_nohaplotig	exon	59394311	59394427	100	+	.	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 149 265 +
Chr2	stalkie_big_nohaplotig	exon	59394531	59395419	99	+	.	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 266 1154 +
Chr2	stalkie_big_nohaplotig	exon	59395516	59395622	99	+	.	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 1155 1261 +
Chr2	stalkie_big_nohaplotig	exon	59396385	59396467	96	+	.	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 1262 1344 +
Chr2	stalkie_big_nohaplotig	exon	59398067	59398185	100	+	.	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 1345 1463 +
Chr2	stalkie_big_nohaplotig	exon	59398245	59398389	100	+	.	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 1464 1608 +
Chr2	stalkie_big_nohaplotig	exon	59398447	59398636	98	+	.	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 1609 1798 +
Chr2	stalkie_big_nohaplotig	exon	59398788	59398924	100	+	.	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 1799 1935 +
Chr2	stalkie_big_nohaplotig	exon	59398989	59399066	100	+	.	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 1936 2013 +
Chr2	stalkie_big_nohaplotig	exon	59399163	59399302	99	+	.	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 2014 2153 +
Chr2	stalkie_big_nohaplotig	exon	59399364	59399439	98	+	.	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 2154 2229 +
Chr2	stalkie_big_nohaplotig	exon	59400445	59400597	100	+	.	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 2230 2382 +
Chr2	stalkie_big_nohaplotig	exon	59400948	59402413	99	+	.	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 2383 3848 +
Chr2	stalkie_big_nohaplotig	exon	59403293	59403394	100	+	.	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 3849 3950 +
Chr2	stalkie_big_nohaplotig	exon	59403460	59403566	100	+	.	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 3951 4057 +
Chr2	stalkie_big_nohaplotig	exon	59403674	59403825	100	+	.	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 4058 4209 +
Chr2	stalkie_big_nohaplotig	CDS	59389119	59389266	.	+	0	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 1 148 +
Chr2	stalkie_big_nohaplotig	CDS	59394311	59394427	.	+	2	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 149 265 +
Chr2	stalkie_big_nohaplotig	CDS	59394531	59395419	.	+	2	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 266 1154 +
Chr2	stalkie_big_nohaplotig	CDS	59395516	59395622	.	+	1	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 1155 1261 +
Chr2	stalkie_big_nohaplotig	CDS	59396385	59396467	.	+	2	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 1262 1344 +
Chr2	stalkie_big_nohaplotig	CDS	59398067	59398185	.	+	0	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 1345 1463 +
Chr2	stalkie_big_nohaplotig	CDS	59398245	59398389	.	+	1	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 1464 1608 +
Chr2	stalkie_big_nohaplotig	CDS	59398447	59398636	.	+	0	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 1609 1798 +
Chr2	stalkie_big_nohaplotig	CDS	59398788	59398924	.	+	2	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 1799 1935 +
Chr2	stalkie_big_nohaplotig	CDS	59398989	59399066	.	+	0	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 1936 2013 +
Chr2	stalkie_big_nohaplotig	CDS	59399163	59399302	.	+	0	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 2014 2153 +
Chr2	stalkie_big_nohaplotig	CDS	59399364	59399439	.	+	1	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 2154 2229 +
Chr2	stalkie_big_nohaplotig	CDS	59400445	59400597	.	+	0	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 2230 2382 +
Chr2	stalkie_big_nohaplotig	CDS	59400948	59402413	.	+	0	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 2383 3848 +
Chr2	stalkie_big_nohaplotig	CDS	59403293	59403394	.	+	1	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 3849 3950 +
Chr2	stalkie_big_nohaplotig	CDS	59403460	59403566	.	+	1	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 3951 4057 +
Chr2	stalkie_big_nohaplotig	CDS	59403674	59403825	.	+	2	Parent=FBgn0034070.1.mrna1;Target=FBgn0034070.1 4058 4209 +
Chr2	gffcl	locus	59404226	59405533	.	-	.	ID=RLOC_00017688;geneIDs=comp159301_c0_seq1.path1;transcripts=comp159301_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59404226	59405533	.	-	.	ID=comp159301_c0_seq1.mrna1;geneID=comp159301_c0_seq1.path1;Name=comp159301_c0_seq1;Dir=indeterminatecoverage=99.4;identity=98.1;matches=1285;mismatches=21;indels=4;unknowns=0;Target=comp159301_c0_seq1 1316 9 .;CDS_Target=comp159301_c0_seq1 145 11 .;locus=RLOC_00017688
Chr2	stalkie_big_nohaplotig	exon	59404226	59405533	98	-	.	Parent=comp159301_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59405397	59405531	.	-	0	Parent=comp159301_c0_seq1.mrna1
Chr2	gffcl	locus	59405626	59405828	.	+	.	ID=RLOC_00017689;geneIDs=comp112912_c0_seq1.path1;transcripts=comp112912_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59405626	59405828	.	+	.	ID=comp112912_c0_seq1.mrna1;geneID=comp112912_c0_seq1.path1;Name=comp112912_c0_seq1;Dir=indeterminatecoverage=89.4;identity=100.0;matches=203;mismatches=0;indels=0;unknowns=0;Target=comp112912_c0_seq1 217 15 .;CDS_Target=comp112912_c0_seq1 138 16 .;locus=RLOC_00017689
Chr2	stalkie_big_nohaplotig	exon	59405626	59405828	100	+	.	Parent=comp112912_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59405627	59405749	.	+	0	Parent=comp112912_c0_seq1.mrna1
Chr2	gffcl	locus	59459215	59634924	.	-	.	ID=RLOC_00017691;geneIDs=comp163327_c0_seq1.path1;transcripts=comp163327_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59459215	59634924	.	-	.	ID=comp163327_c0_seq1.mrna1;geneID=comp163327_c0_seq1.path1;Name=comp163327_c0_seq1;Dir=indeterminatecoverage=97.7;identity=96.3;matches=1008;mismatches=30;indels=9;unknowns=0;Target=comp163327_c0_seq1 481 287 .;locus=RLOC_00017691
Chr2	stalkie_big_nohaplotig	exon	59459215	59459366	93	-	.	Parent=comp163327_c0_seq1.mrna1;Target=comp163327_c0_seq1 1113 962 .
Chr2	stalkie_big_nohaplotig	exon	59459405	59459456	78	-	.	Parent=comp163327_c0_seq1.mrna1;Target=comp163327_c0_seq1 941 897 .
Chr2	stalkie_big_nohaplotig	exon	59465783	59465793	100	-	.	Parent=comp163327_c0_seq1.mrna1;Target=comp163327_c0_seq1 896 886 .
Chr2	stalkie_big_nohaplotig	exon	59480864	59480870	100	-	.	Parent=comp163327_c0_seq1.mrna1;Target=comp163327_c0_seq1 885 879 .
Chr2	stalkie_big_nohaplotig	exon	59634101	59634924	97	-	.	Parent=comp163327_c0_seq1.mrna1;Target=comp163327_c0_seq1 850 27 .
Chr2	stalkie_big_nohaplotig	CDS	59634471	59634664	.	-	0	Parent=comp163327_c0_seq1.mrna1
Chr2	gffcl	locus	59489901	59491661	.	-	.	ID=RLOC_00017692;geneIDs=comp158124_c0_seq1.path1;transcripts=comp158124_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59489901	59491661	.	-	.	ID=comp158124_c0_seq1.mrna1;geneID=comp158124_c0_seq1.path1;Name=comp158124_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=1691;mismatches=17;indels=2;unknowns=0;Target=comp158124_c0_seq1 399 842 .;locus=RLOC_00017692
Chr2	stalkie_big_nohaplotig	exon	59489901	59490200	98	-	.	Parent=comp158124_c0_seq1.mrna1;Target=comp158124_c0_seq1 1 301 -
Chr2	stalkie_big_nohaplotig	exon	59490254	59491661	98	-	.	Parent=comp158124_c0_seq1.mrna1;Target=comp158124_c0_seq1 302 1710 -
Chr2	stalkie_big_nohaplotig	CDS	59490351	59490793	.	-	0	Parent=comp158124_c0_seq1.mrna1
Chr2	gffcl	locus	59517865	59519004	.	-	.	ID=RLOC_00017694;geneIDs=comp150615_c0_seq1.path2;transcripts=comp150615_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	59517865	59519004	.	-	.	ID=comp150615_c0_seq1.mrna2;geneID=comp150615_c0_seq1.path2;Name=comp150615_c0_seq1;Dir=sensecoverage=94.4;identity=97.0;matches=1028;mismatches=21;indels=11;unknowns=0;Target=comp150615_c0_seq1 666 788 +;locus=RLOC_00017694
Chr2	stalkie_big_nohaplotig	exon	59517865	59518478	96	-	.	Parent=comp150615_c0_seq1.mrna2;Target=comp150615_c0_seq1 458 1064 +
Chr2	stalkie_big_nohaplotig	exon	59518559	59519004	97	-	.	Parent=comp150615_c0_seq1.mrna2;Target=comp150615_c0_seq1 16 457 +
Chr2	stalkie_big_nohaplotig	CDS	59518148	59518270	.	-	0	Parent=comp150615_c0_seq1.mrna2
Chr2	gffcl	locus	59538021	59541372	.	-	.	ID=RLOC_00017695;geneIDs=comp162072_c0_seq1.path1,comp163074_c1_seq1.path2;transcripts=comp162072_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59538021	59541372	.	-	.	ID=comp162072_c0_seq1.mrna1;geneID=comp162072_c0_seq1.path1;Name=comp162072_c0_seq1;Dir=sensecoverage=100.0;identity=95.1;matches=1600;mismatches=27;indels=55;unknowns=0;locus=RLOC_00017695
Chr2	stalkie_big_nohaplotig	exon	59538021	59538204	87	-	.	Parent=comp162072_c0_seq1.mrna1;Target=comp162072_c0_seq1 1494 1687 +
Chr2	stalkie_big_nohaplotig	exon	59538322	59539014	93	-	.	Parent=comp162072_c0_seq1.mrna1;Target=comp162072_c0_seq1 768 1493 +
Chr2	stalkie_big_nohaplotig	exon	59539345	59539576	97	-	.	Parent=comp162072_c0_seq1.mrna1;Target=comp162072_c0_seq1 536 767 +
Chr2	stalkie_big_nohaplotig	exon	59539889	59540073	98	-	.	Parent=comp162072_c0_seq1.mrna1;Target=comp162072_c0_seq1 340 524 +
Chr2	stalkie_big_nohaplotig	exon	59540176	59540274	96	-	.	Parent=comp162072_c0_seq1.mrna1;Target=comp162072_c0_seq1 241 339 +
Chr2	stalkie_big_nohaplotig	exon	59541133	59541372	100	-	.	Parent=comp162072_c0_seq1.mrna1;Target=comp162072_c0_seq1 1 240 +
Chr2	stalkie_big_nohaplotig	CDS	59540240	59540274	.	-	2	Parent=comp162072_c0_seq1.mrna1;Target=comp162072_c0_seq1 241 275 +
Chr2	stalkie_big_nohaplotig	CDS	59541133	59541247	.	-	0	Parent=comp162072_c0_seq1.mrna1;Target=comp162072_c0_seq1 126 240 +
Chr2	gffcl	locus	59558437	59558882	.	+	.	ID=RLOC_00017696;geneIDs=comp117601_c0_seq1.path1;transcripts=comp117601_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59558437	59558882	.	+	.	ID=comp117601_c0_seq1.mrna1;geneID=comp117601_c0_seq1.path1;Name=comp117601_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.5;matches=435;mismatches=11;indels=0;unknowns=0;Target=comp117601_c0_seq1 446 1 .;CDS_Target=comp117601_c0_seq1 281 198 .;locus=RLOC_00017696
Chr2	stalkie_big_nohaplotig	exon	59558437	59558882	97	+	.	Parent=comp117601_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59558634	59558717	.	+	0	Parent=comp117601_c0_seq1.mrna1
Chr2	gffcl	locus	59581630	59583066	.	-	.	ID=RLOC_00017697;geneIDs=comp153177_c0_seq1.path1;transcripts=comp153177_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59581630	59583066	.	-	.	ID=comp153177_c0_seq1.mrna1;geneID=comp153177_c0_seq1.path1;Name=comp153177_c0_seq1;Dir=indeterminatecoverage=98.9;identity=98.6;matches=1425;mismatches=6;indels=14;unknowns=0;Target=comp153177_c0_seq1 1439 1 .;CDS_Target=comp153177_c0_seq1 1117 1046 .;locus=RLOC_00017697
Chr2	stalkie_big_nohaplotig	exon	59581630	59583066	98	-	.	Parent=comp153177_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59581952	59582023	.	-	0	Parent=comp153177_c0_seq1.mrna1
Chr2	gffcl	locus	59593894	59606799	.	-	.	ID=RLOC_00017698;geneIDs=FBgn0034072.1.path1;transcripts=FBgn0034072.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59593894	59606799	.	-	.	ID=FBgn0034072.1.mrna1;geneID=FBgn0034072.1.path1;Name=FBgn0034072.1;Dir=sensecoverage=92.4;identity=99.4;matches=2682;mismatches=15;indels=0;unknowns=0;locus=RLOC_00017698
Chr2	stalkie_big_nohaplotig	exon	59593894	59594012	100	-	.	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 2801 2919 +
Chr2	stalkie_big_nohaplotig	exon	59595905	59596066	98	-	.	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 2639 2800 +
Chr2	stalkie_big_nohaplotig	exon	59596165	59596359	100	-	.	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 2444 2638 +
Chr2	stalkie_big_nohaplotig	exon	59596554	59597507	98	-	.	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 1490 2443 +
Chr2	stalkie_big_nohaplotig	exon	59597565	59597764	100	-	.	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 1290 1489 +
Chr2	stalkie_big_nohaplotig	exon	59598854	59599227	100	-	.	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 916 1289 +
Chr2	stalkie_big_nohaplotig	exon	59599279	59599341	98	-	.	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 853 915 +
Chr2	stalkie_big_nohaplotig	exon	59605800	59605866	100	-	.	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 786 852 +
Chr2	stalkie_big_nohaplotig	exon	59605958	59606050	100	-	.	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 693 785 +
Chr2	stalkie_big_nohaplotig	exon	59606110	59606252	100	-	.	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 550 692 +
Chr2	stalkie_big_nohaplotig	exon	59606328	59606447	100	-	.	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 430 549 +
Chr2	stalkie_big_nohaplotig	exon	59606593	59606799	100	-	.	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 223 429 +
Chr2	stalkie_big_nohaplotig	CDS	59593894	59594012	.	-	2	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 2801 2919 +
Chr2	stalkie_big_nohaplotig	CDS	59595905	59596066	.	-	2	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 2639 2800 +
Chr2	stalkie_big_nohaplotig	CDS	59596165	59596359	.	-	2	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 2444 2638 +
Chr2	stalkie_big_nohaplotig	CDS	59596554	59597507	.	-	2	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 1490 2443 +
Chr2	stalkie_big_nohaplotig	CDS	59597565	59597764	.	-	1	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 1290 1489 +
Chr2	stalkie_big_nohaplotig	CDS	59598854	59599227	.	-	0	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 916 1289 +
Chr2	stalkie_big_nohaplotig	CDS	59599279	59599341	.	-	0	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 853 915 +
Chr2	stalkie_big_nohaplotig	CDS	59605800	59605866	.	-	1	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 786 852 +
Chr2	stalkie_big_nohaplotig	CDS	59605958	59606050	.	-	1	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 693 785 +
Chr2	stalkie_big_nohaplotig	CDS	59606110	59606252	.	-	0	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 550 692 +
Chr2	stalkie_big_nohaplotig	CDS	59606328	59606447	.	-	0	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 430 549 +
Chr2	stalkie_big_nohaplotig	CDS	59606593	59606799	.	-	0	Parent=FBgn0034072.1.mrna1;Target=FBgn0034072.1 223 429 +
Chr2	gffcl	locus	59667755	59668147	.	+	.	ID=RLOC_00017699;geneIDs=FBgn0083983.1.path1;transcripts=FBgn0083983.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59667755	59668147	.	+	.	ID=FBgn0083983.1.mrna1;geneID=FBgn0083983.1.path1;Name=FBgn0083983.1;Dir=sensecoverage=100.0;identity=94.2;matches=325;mismatches=4;indels=16;unknowns=0;Target=FBgn0083983.1 3 80 +;locus=RLOC_00017699
Chr2	stalkie_big_nohaplotig	exon	59667755	59667863	87	+	.	Parent=FBgn0083983.1.mrna1;Target=FBgn0083983.1 1 125 +
Chr2	stalkie_big_nohaplotig	exon	59667928	59668147	98	+	.	Parent=FBgn0083983.1.mrna1;Target=FBgn0083983.1 126 345 +
Chr2	stalkie_big_nohaplotig	CDS	59667757	59667818	.	+	0	Parent=FBgn0083983.1.mrna1
Chr2	gffcl	locus	59669591	59671067	.	-	.	ID=RLOC_00017700;geneIDs=FBgn0034073.path1;transcripts=FBgn0034073.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59669591	59671067	.	-	.	ID=FBgn0034073.mrna1;geneID=FBgn0034073.path1;Name=FBgn0034073;Dir=sensecoverage=100.0;identity=99.3;matches=1334;mismatches=9;indels=1;unknowns=0;Target=FBgn0034073 3 83 +;locus=RLOC_00017700
Chr2	stalkie_big_nohaplotig	exon	59669591	59669850	100	-	.	Parent=FBgn0034073.mrna1;Target=FBgn0034073 1085 1344 +
Chr2	stalkie_big_nohaplotig	exon	59669915	59670054	99	-	.	Parent=FBgn0034073.mrna1;Target=FBgn0034073 945 1084 +
Chr2	stalkie_big_nohaplotig	exon	59670125	59671067	99	-	.	Parent=FBgn0034073.mrna1;Target=FBgn0034073 1 944 +
Chr2	stalkie_big_nohaplotig	CDS	59670986	59671065	.	-	0	Parent=FBgn0034073.mrna1
Chr2	gffcl	locus	59678370	59684222	.	+	.	ID=RLOC_00017701;geneIDs=FBgn0014020.1.path1;transcripts=FBgn0014020.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59678370	59684222	.	+	.	ID=FBgn0014020.1.mrna1;geneID=FBgn0014020.1.path1;Name=FBgn0014020.1;Dir=sensecoverage=100.0;identity=100.0;matches=579;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017701
Chr2	stalkie_big_nohaplotig	exon	59678370	59678528	100	+	.	Parent=FBgn0014020.1.mrna1;Target=FBgn0014020.1 1 159 +
Chr2	stalkie_big_nohaplotig	exon	59683020	59683169	100	+	.	Parent=FBgn0014020.1.mrna1;Target=FBgn0014020.1 160 309 +
Chr2	stalkie_big_nohaplotig	exon	59683236	59683316	100	+	.	Parent=FBgn0014020.1.mrna1;Target=FBgn0014020.1 310 390 +
Chr2	stalkie_big_nohaplotig	exon	59684034	59684222	100	+	.	Parent=FBgn0014020.1.mrna1;Target=FBgn0014020.1 391 579 +
Chr2	stalkie_big_nohaplotig	CDS	59678370	59678528	.	+	0	Parent=FBgn0014020.1.mrna1;Target=FBgn0014020.1 1 159 +
Chr2	stalkie_big_nohaplotig	CDS	59683020	59683169	.	+	0	Parent=FBgn0014020.1.mrna1;Target=FBgn0014020.1 160 309 +
Chr2	stalkie_big_nohaplotig	CDS	59683236	59683316	.	+	0	Parent=FBgn0014020.1.mrna1;Target=FBgn0014020.1 310 390 +
Chr2	stalkie_big_nohaplotig	CDS	59684034	59684222	.	+	0	Parent=FBgn0014020.1.mrna1;Target=FBgn0014020.1 391 579 +
Chr2	gffcl	locus	59692014	59692364	.	-	.	ID=RLOC_00017702;geneIDs=comp84039_c0_seq1.path1;transcripts=comp84039_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59692014	59692364	.	-	.	ID=comp84039_c0_seq1.mrna1;geneID=comp84039_c0_seq1.path1;Name=comp84039_c0_seq1;Dir=indeterminatecoverage=25.5;identity=100.0;matches=351;mismatches=0;indels=0;unknowns=0;Target=comp84039_c0_seq1 968 618 .;CDS_Target=comp84039_c0_seq1 943 833 .;locus=RLOC_00017702
Chr2	stalkie_big_nohaplotig	exon	59692014	59692364	100	-	.	Parent=comp84039_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59692039	59692149	.	-	0	Parent=comp84039_c0_seq1.mrna1
Chr2	gffcl	locus	59692558	59693071	.	-	.	ID=RLOC_00017703;geneIDs=comp93544_c0_seq1.path1;transcripts=comp93544_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59692558	59693071	.	-	.	ID=comp93544_c0_seq1.mrna1;geneID=comp93544_c0_seq1.path1;Name=comp93544_c0_seq1;Dir=indeterminatecoverage=94.2;identity=99.2;matches=514;mismatches=0;indels=4;unknowns=0;Target=comp93544_c0_seq1 536 19 .;CDS_Target=comp93544_c0_seq1 90 19 .;locus=RLOC_00017703
Chr2	stalkie_big_nohaplotig	exon	59692558	59693071	99	-	.	Parent=comp93544_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59693004	59693071	.	-	0	Parent=comp93544_c0_seq1.mrna1
Chr2	gffcl	locus	59693088	59693492	.	-	.	ID=RLOC_00017704;geneIDs=comp137429_c0_seq1.path1;transcripts=comp137429_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59693088	59693492	.	-	.	ID=comp137429_c0_seq1.mrna1;geneID=comp137429_c0_seq1.path1;Name=comp137429_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=400;mismatches=4;indels=1;unknowns=0;Target=comp137429_c0_seq1 404 1 .;CDS_Target=comp137429_c0_seq1 243 193 .;locus=RLOC_00017704
Chr2	stalkie_big_nohaplotig	exon	59693088	59693492	98	-	.	Parent=comp137429_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59693249	59693299	.	-	0	Parent=comp137429_c0_seq1.mrna1
Chr2	gffcl	locus	59693762	59698411	.	-	.	ID=RLOC_00017705;geneIDs=FBgn0017549.1.path1;transcripts=FBgn0017549.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59693762	59698411	.	-	.	ID=FBgn0017549.1.mrna1;geneID=FBgn0017549.1.path1;Name=FBgn0017549.1;Dir=sensecoverage=100.0;identity=99.6;matches=780;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017705
Chr2	stalkie_big_nohaplotig	exon	59693762	59693872	100	-	.	Parent=FBgn0017549.1.mrna1;Target=FBgn0017549.1 673 783 +
Chr2	stalkie_big_nohaplotig	exon	59693943	59694080	98	-	.	Parent=FBgn0017549.1.mrna1;Target=FBgn0017549.1 535 672 +
Chr2	stalkie_big_nohaplotig	exon	59694143	59694408	99	-	.	Parent=FBgn0017549.1.mrna1;Target=FBgn0017549.1 269 534 +
Chr2	stalkie_big_nohaplotig	exon	59698012	59698068	100	-	.	Parent=FBgn0017549.1.mrna1;Target=FBgn0017549.1 212 268 +
Chr2	stalkie_big_nohaplotig	exon	59698201	59698411	100	-	.	Parent=FBgn0017549.1.mrna1;Target=FBgn0017549.1 1 211 +
Chr2	stalkie_big_nohaplotig	CDS	59693762	59693872	.	-	0	Parent=FBgn0017549.1.mrna1;Target=FBgn0017549.1 673 783 +
Chr2	stalkie_big_nohaplotig	CDS	59693943	59694080	.	-	0	Parent=FBgn0017549.1.mrna1;Target=FBgn0017549.1 535 672 +
Chr2	stalkie_big_nohaplotig	CDS	59694143	59694408	.	-	2	Parent=FBgn0017549.1.mrna1;Target=FBgn0017549.1 269 534 +
Chr2	stalkie_big_nohaplotig	CDS	59698012	59698068	.	-	2	Parent=FBgn0017549.1.mrna1;Target=FBgn0017549.1 212 268 +
Chr2	stalkie_big_nohaplotig	CDS	59698201	59698411	.	-	0	Parent=FBgn0017549.1.mrna1;Target=FBgn0017549.1 1 211 +
Chr2	gffcl	locus	59700992	59701948	.	-	.	ID=RLOC_00017706;geneIDs=FBgn0033101.1.path1;transcripts=FBgn0033101.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59700992	59701948	.	-	.	ID=FBgn0033101.1.mrna1;geneID=FBgn0033101.1.path1;Name=FBgn0033101.1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=946;mismatches=11;indels=0;unknowns=0;Target=FBgn0033101.1 957 1 .;locus=RLOC_00017706
Chr2	stalkie_big_nohaplotig	exon	59700992	59701948	98	-	.	Parent=FBgn0033101.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59700992	59701948	.	-	0	Parent=FBgn0033101.1.mrna1
Chr2	gffcl	locus	59707045	59707369	.	-	.	ID=RLOC_00017707;geneIDs=comp144508_c0_seq1.path1;transcripts=comp144508_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59707045	59707369	.	-	.	ID=comp144508_c0_seq1.mrna1;geneID=comp144508_c0_seq1.path1;Name=comp144508_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=319;mismatches=4;indels=2;unknowns=0;Target=comp144508_c0_seq1 323 1 .;CDS_Target=comp144508_c0_seq1 126 1 .;locus=RLOC_00017707
Chr2	stalkie_big_nohaplotig	exon	59707045	59707369	98	-	.	Parent=comp144508_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59707244	59707369	.	-	0	Parent=comp144508_c0_seq1.mrna1
Chr2	gffcl	locus	59712170	59712984	.	+	.	ID=RLOC_00017708;geneIDs=comp145219_c0_seq1.path1;transcripts=comp145219_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59712170	59712984	.	+	.	ID=comp145219_c0_seq1.mrna1;geneID=comp145219_c0_seq1.path1;Name=comp145219_c0_seq1;Dir=indeterminatecoverage=96.8;identity=99.9;matches=814;mismatches=1;indels=0;unknowns=0;Target=comp145219_c0_seq1 832 18 .;CDS_Target=comp145219_c0_seq1 507 412 .;locus=RLOC_00017708
Chr2	stalkie_big_nohaplotig	exon	59712170	59712984	99	+	.	Parent=comp145219_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59712564	59712659	.	+	0	Parent=comp145219_c0_seq1.mrna1
Chr2	gffcl	locus	59720966	59721290	.	-	.	ID=RLOC_00017709;geneIDs=comp144508_c0_seq1.path2;transcripts=comp144508_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	59720966	59721290	.	-	.	ID=comp144508_c0_seq1.mrna2;geneID=comp144508_c0_seq1.path2;Name=comp144508_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=319;mismatches=4;indels=2;unknowns=0;Target=comp144508_c0_seq1 323 1 .;CDS_Target=comp144508_c0_seq1 126 1 .;locus=RLOC_00017709
Chr2	stalkie_big_nohaplotig	exon	59720966	59721290	98	-	.	Parent=comp144508_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	59721165	59721290	.	-	0	Parent=comp144508_c0_seq1.mrna2
Chr2	gffcl	locus	59725800	59726614	.	+	.	ID=RLOC_00017710;geneIDs=comp145219_c0_seq1.path2;transcripts=comp145219_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	59725800	59726614	.	+	.	ID=comp145219_c0_seq1.mrna2;geneID=comp145219_c0_seq1.path2;Name=comp145219_c0_seq1;Dir=indeterminatecoverage=96.8;identity=99.9;matches=814;mismatches=1;indels=0;unknowns=0;Target=comp145219_c0_seq1 832 18 .;CDS_Target=comp145219_c0_seq1 507 412 .;locus=RLOC_00017710
Chr2	stalkie_big_nohaplotig	exon	59725800	59726614	99	+	.	Parent=comp145219_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	59726194	59726289	.	+	0	Parent=comp145219_c0_seq1.mrna2
Chr2	gffcl	locus	59729471	59730233	.	+	.	ID=RLOC_00017711;geneIDs=comp150641_c0_seq1.path1;transcripts=comp150641_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59729471	59730233	.	+	.	ID=comp150641_c0_seq1.mrna1;geneID=comp150641_c0_seq1.path1;Name=comp150641_c0_seq1;Dir=indeterminatecoverage=99.3;identity=97.7;matches=751;mismatches=6;indels=12;unknowns=0;Target=comp150641_c0_seq1 763 1 .;CDS_Target=comp150641_c0_seq1 700 551 .;locus=RLOC_00017711
Chr2	stalkie_big_nohaplotig	exon	59729471	59730233	97	+	.	Parent=comp150641_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59730021	59730170	.	+	0	Parent=comp150641_c0_seq1.mrna1
Chr2	gffcl	locus	59828289	59829052	.	-	.	ID=RLOC_00017713;geneIDs=comp69582_c0_seq1.path1;transcripts=comp69582_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59828289	59829052	.	-	.	ID=comp69582_c0_seq1.mrna1;geneID=comp69582_c0_seq1.path1;Name=comp69582_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=764;mismatches=0;indels=0;unknowns=0;Target=comp69582_c0_seq1 764 1 .;CDS_Target=comp69582_c0_seq1 426 364 .;locus=RLOC_00017713
Chr2	stalkie_big_nohaplotig	exon	59828289	59829052	100	-	.	Parent=comp69582_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59828627	59828689	.	-	0	Parent=comp69582_c0_seq1.mrna1
Chr2	gffcl	locus	59929127	59929768	.	-	.	ID=RLOC_00017714;geneIDs=comp138430_c2_seq1.path1;transcripts=comp138430_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59929127	59929768	.	-	.	ID=comp138430_c2_seq1.mrna1;geneID=comp138430_c2_seq1.path1;Name=comp138430_c2_seq1;Dir=indeterminatecoverage=99.2;identity=93.8;matches=602;mismatches=37;indels=3;unknowns=0;Target=comp138430_c2_seq1 639 1 .;CDS_Target=comp138430_c2_seq1 628 482 .;locus=RLOC_00017714
Chr2	stalkie_big_nohaplotig	exon	59929127	59929768	93	-	.	Parent=comp138430_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59929138	59929284	.	-	0	Parent=comp138430_c2_seq1.mrna1
Chr2	gffcl	locus	59946603	59952067	.	-	.	ID=RLOC_00017715;geneIDs=comp152261_c0_seq1.path1;transcripts=comp152261_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59946603	59952067	.	-	.	ID=comp152261_c0_seq1.mrna1;geneID=comp152261_c0_seq1.path1;Name=comp152261_c0_seq1;Dir=sensecoverage=99.8;identity=97.2;matches=952;mismatches=26;indels=1;unknowns=0;locus=RLOC_00017715
Chr2	stalkie_big_nohaplotig	exon	59946603	59946784	93	-	.	Parent=comp152261_c0_seq1.mrna1;Target=comp152261_c0_seq1 800 980 +
Chr2	stalkie_big_nohaplotig	exon	59946871	59947100	98	-	.	Parent=comp152261_c0_seq1.mrna1;Target=comp152261_c0_seq1 570 799 +
Chr2	stalkie_big_nohaplotig	exon	59947191	59947362	99	-	.	Parent=comp152261_c0_seq1.mrna1;Target=comp152261_c0_seq1 398 569 +
Chr2	stalkie_big_nohaplotig	exon	59947498	59947624	96	-	.	Parent=comp152261_c0_seq1.mrna1;Target=comp152261_c0_seq1 271 397 +
Chr2	stalkie_big_nohaplotig	exon	59951800	59952067	98	-	.	Parent=comp152261_c0_seq1.mrna1;Target=comp152261_c0_seq1 3 270 +
Chr2	stalkie_big_nohaplotig	CDS	59946690	59946784	.	-	2	Parent=comp152261_c0_seq1.mrna1;Target=comp152261_c0_seq1 800 894 +
Chr2	stalkie_big_nohaplotig	CDS	59946871	59947100	.	-	1	Parent=comp152261_c0_seq1.mrna1;Target=comp152261_c0_seq1 570 799 +
Chr2	stalkie_big_nohaplotig	CDS	59947191	59947362	.	-	2	Parent=comp152261_c0_seq1.mrna1;Target=comp152261_c0_seq1 398 569 +
Chr2	stalkie_big_nohaplotig	CDS	59947498	59947609	.	-	0	Parent=comp152261_c0_seq1.mrna1;Target=comp152261_c0_seq1 286 397 +
Chr2	gffcl	locus	59954327	59955769	.	+	.	ID=RLOC_00017716;geneIDs=FBgn0014028.1.path1;transcripts=FBgn0014028.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59954327	59955769	.	+	.	ID=FBgn0014028.1.mrna1;geneID=FBgn0014028.1.path1;Name=FBgn0014028.1;Dir=sensecoverage=100.0;identity=99.3;matches=885;mismatches=6;indels=0;unknowns=0;locus=RLOC_00017716
Chr2	stalkie_big_nohaplotig	exon	59954327	59954392	98	+	.	Parent=FBgn0014028.1.mrna1;Target=FBgn0014028.1 1 66 +
Chr2	stalkie_big_nohaplotig	exon	59954677	59954975	99	+	.	Parent=FBgn0014028.1.mrna1;Target=FBgn0014028.1 67 365 +
Chr2	stalkie_big_nohaplotig	exon	59955190	59955324	98	+	.	Parent=FBgn0014028.1.mrna1;Target=FBgn0014028.1 366 500 +
Chr2	stalkie_big_nohaplotig	exon	59955379	59955769	99	+	.	Parent=FBgn0014028.1.mrna1;Target=FBgn0014028.1 501 891 +
Chr2	stalkie_big_nohaplotig	CDS	59954327	59954392	.	+	0	Parent=FBgn0014028.1.mrna1;Target=FBgn0014028.1 1 66 +
Chr2	stalkie_big_nohaplotig	CDS	59954677	59954975	.	+	0	Parent=FBgn0014028.1.mrna1;Target=FBgn0014028.1 67 365 +
Chr2	stalkie_big_nohaplotig	CDS	59955190	59955324	.	+	1	Parent=FBgn0014028.1.mrna1;Target=FBgn0014028.1 366 500 +
Chr2	stalkie_big_nohaplotig	CDS	59955379	59955769	.	+	1	Parent=FBgn0014028.1.mrna1;Target=FBgn0014028.1 501 891 +
Chr2	gffcl	locus	59978884	59979373	.	-	.	ID=RLOC_00017718;geneIDs=comp149435_c0_seq1.path1;transcripts=comp149435_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59978884	59979373	.	-	.	ID=comp149435_c0_seq1.mrna1;geneID=comp149435_c0_seq1.path1;Name=comp149435_c0_seq1;Dir=indeterminatecoverage=95.7;identity=99.6;matches=488;mismatches=2;indels=0;unknowns=0;Target=comp149435_c0_seq1 510 21 .;CDS_Target=comp149435_c0_seq1 122 21 .;locus=RLOC_00017718
Chr2	stalkie_big_nohaplotig	exon	59978884	59979373	99	-	.	Parent=comp149435_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59979272	59979373	.	-	0	Parent=comp149435_c0_seq1.mrna1
Chr2	gffcl	locus	59984055	59985885	.	+	.	ID=RLOC_00017719;geneIDs=comp163239_c0_seq1.path1;transcripts=comp163239_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	59984055	59985885	.	+	.	ID=comp163239_c0_seq1.mrna1;geneID=comp163239_c0_seq1.path1;Name=comp163239_c0_seq1;Dir=indeterminatecoverage=99.4;identity=95.6;matches=1757;mismatches=40;indels=41;unknowns=0;Target=comp163239_c0_seq1 1804 1 .;CDS_Target=comp163239_c0_seq1 742 602 .;locus=RLOC_00017719
Chr2	stalkie_big_nohaplotig	exon	59984055	59985885	95	+	.	Parent=comp163239_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	59984687	59984827	.	+	0	Parent=comp163239_c0_seq1.mrna1
Chr2	gffcl	locus	60023224	60023881	.	+	.	ID=RLOC_00017720;geneIDs=comp149430_c0_seq1.path1;transcripts=comp149430_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60023224	60023881	.	+	.	ID=comp149430_c0_seq1.mrna1;geneID=comp149430_c0_seq1.path1;Name=comp149430_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.2;matches=621;mismatches=18;indels=27;unknowns=0;Target=comp149430_c0_seq1 647 1 .;CDS_Target=comp149430_c0_seq1 445 404 .;locus=RLOC_00017720
Chr2	stalkie_big_nohaplotig	exon	60023224	60023881	93	+	.	Parent=comp149430_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60023627	60023678	.	+	0	Parent=comp149430_c0_seq1.mrna1
Chr2	gffcl	locus	60029173	60029547	.	+	.	ID=RLOC_00017721;geneIDs=comp142981_c0_seq1.path1;transcripts=comp142981_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60029173	60029547	.	+	.	ID=comp142981_c0_seq1.mrna1;geneID=comp142981_c0_seq1.path1;Name=comp142981_c0_seq1;Dir=indeterminatecoverage=94.0;identity=99.7;matches=374;mismatches=1;indels=0;unknowns=0;Target=comp142981_c0_seq1 375 1 .;CDS_Target=comp142981_c0_seq1 214 65 .;locus=RLOC_00017721
Chr2	stalkie_big_nohaplotig	exon	60029173	60029547	99	+	.	Parent=comp142981_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60029237	60029386	.	+	0	Parent=comp142981_c0_seq1.mrna1
Chr2	gffcl	locus	60038672	60038936	.	-	.	ID=RLOC_00017722;geneIDs=comp144118_c0_seq1.path1;transcripts=comp144118_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60038672	60038936	.	-	.	ID=comp144118_c0_seq1.mrna1;geneID=comp144118_c0_seq1.path1;Name=comp144118_c0_seq1;Dir=indeterminatecoverage=95.7;identity=99.6;matches=264;mismatches=1;indels=0;unknowns=0;Target=comp144118_c0_seq1 265 1 .;CDS_Target=comp144118_c0_seq1 135 1 .;locus=RLOC_00017722
Chr2	stalkie_big_nohaplotig	exon	60038672	60038936	99	-	.	Parent=comp144118_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60038802	60038936	.	-	0	Parent=comp144118_c0_seq1.mrna1
Chr2	gffcl	locus	60042105	60046285	.	+	.	ID=RLOC_00017723;geneIDs=FBgn0013348.1.path1;transcripts=FBgn0013348.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60042105	60046285	.	+	.	ID=FBgn0013348.1.mrna1;geneID=FBgn0013348.1.path1;Name=FBgn0013348.1;Dir=sensecoverage=100.0;identity=99.5;matches=439;mismatches=1;indels=1;unknowns=0;locus=RLOC_00017723
Chr2	stalkie_big_nohaplotig	exon	60042105	60042122	100	+	.	Parent=FBgn0013348.1.mrna1;Target=FBgn0013348.1 1 18 +
Chr2	stalkie_big_nohaplotig	exon	60045798	60046193	99	+	.	Parent=FBgn0013348.1.mrna1;Target=FBgn0013348.1 19 415 +
Chr2	stalkie_big_nohaplotig	exon	60046260	60046285	100	+	.	Parent=FBgn0013348.1.mrna1;Target=FBgn0013348.1 416 441 +
Chr2	stalkie_big_nohaplotig	CDS	60042107	60042122	.	+	0	Parent=FBgn0013348.1.mrna1;Target=FBgn0013348.1 3 18 +
Chr2	stalkie_big_nohaplotig	CDS	60045798	60045900	.	+	2	Parent=FBgn0013348.1.mrna1;Target=FBgn0013348.1 19 122 +
Chr2	gffcl	locus	60042570	60043097	.	+	.	ID=RLOC_00017724;geneIDs=comp138525_c1_seq1.path1;transcripts=comp138525_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60042570	60043097	.	+	.	ID=comp138525_c1_seq1.mrna1;geneID=comp138525_c1_seq1.path1;Name=comp138525_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=521;mismatches=7;indels=0;unknowns=0;Target=comp138525_c1_seq1 528 1 .;CDS_Target=comp138525_c1_seq1 119 3 .;locus=RLOC_00017724
Chr2	stalkie_big_nohaplotig	exon	60042570	60043097	98	+	.	Parent=comp138525_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60042572	60042688	.	+	0	Parent=comp138525_c1_seq1.mrna1
Chr2	gffcl	locus	60102659	60108424	.	+	.	ID=RLOC_00017725;geneIDs=FBgn0033027.1.path1,comp149037_c0_seq1.path1,comp152606_c0_seq1.path1;transcripts=FBgn0033027.1.mrna1,comp149037_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60102659	60107050	.	+	.	ID=FBgn0033027.1.mrna1;geneID=FBgn0033027.1.path1;Name=FBgn0033027.1;Dir=sensecoverage=100.0;identity=100.0;matches=495;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017725
Chr2	stalkie_big_nohaplotig	exon	60102659	60102697	100	+	.	Parent=FBgn0033027.1.mrna1;Target=FBgn0033027.1 1 39 +
Chr2	stalkie_big_nohaplotig	exon	60106219	60106252	100	+	.	Parent=FBgn0033027.1.mrna1;Target=FBgn0033027.1 40 73 +
Chr2	stalkie_big_nohaplotig	exon	60106319	60106717	100	+	.	Parent=FBgn0033027.1.mrna1;Target=FBgn0033027.1 74 472 +
Chr2	stalkie_big_nohaplotig	exon	60107028	60107050	100	+	.	Parent=FBgn0033027.1.mrna1;Target=FBgn0033027.1 473 495 +
Chr2	stalkie_big_nohaplotig	CDS	60102659	60102697	.	+	0	Parent=FBgn0033027.1.mrna1;Target=FBgn0033027.1 1 39 +
Chr2	stalkie_big_nohaplotig	CDS	60106219	60106252	.	+	0	Parent=FBgn0033027.1.mrna1;Target=FBgn0033027.1 40 73 +
Chr2	stalkie_big_nohaplotig	CDS	60106319	60106717	.	+	2	Parent=FBgn0033027.1.mrna1;Target=FBgn0033027.1 74 472 +
Chr2	stalkie_big_nohaplotig	CDS	60107028	60107050	.	+	2	Parent=FBgn0033027.1.mrna1;Target=FBgn0033027.1 473 495 +
Chr2	stalkie_big_nohaplotig	mRNA	60107027	60108424	.	+	.	ID=comp149037_c0_seq1.mrna1;geneID=comp149037_c0_seq1.path1;Name=comp149037_c0_seq1;Dir=antisensecoverage=99.4;identity=96.6;matches=345;mismatches=9;indels=3;unknowns=0;Target=comp149037_c0_seq1 231 278 .;locus=RLOC_00017725
Chr2	stalkie_big_nohaplotig	exon	60107027	60107048	100	+	.	Parent=comp149037_c0_seq1.mrna1;Target=comp149037_c0_seq1 334 355 -
Chr2	stalkie_big_nohaplotig	exon	60108091	60108424	96	+	.	Parent=comp149037_c0_seq1.mrna1;Target=comp149037_c0_seq1 1 333 -
Chr2	stalkie_big_nohaplotig	CDS	60108146	60108193	.	+	0	Parent=comp149037_c0_seq1.mrna1
Chr2	gffcl	locus	60104785	60106005	.	-	.	ID=RLOC_00017726;geneIDs=comp151222_c0_seq1.path1;transcripts=comp151222_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60104785	60106005	.	-	.	ID=comp151222_c0_seq1.mrna1;geneID=comp151222_c0_seq1.path1;Name=comp151222_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=1195;mismatches=17;indels=0;unknowns=0;Target=comp151222_c0_seq1 135 1 .;locus=RLOC_00017726
Chr2	stalkie_big_nohaplotig	exon	60104785	60105463	97	-	.	Parent=comp151222_c0_seq1.mrna1;Target=comp151222_c0_seq1 1480 802 .
Chr2	stalkie_big_nohaplotig	exon	60105473	60106005	99	-	.	Parent=comp151222_c0_seq1.mrna1;Target=comp151222_c0_seq1 533 1 .
Chr2	stalkie_big_nohaplotig	CDS	60105871	60106005	.	-	0	Parent=comp151222_c0_seq1.mrna1
Chr2	gffcl	locus	60118030	60119620	.	.	.	ID=RLOC_00017727;geneIDs=comp123678_c1_seq1.path2,comp151138_c0_seq1.path1;transcripts=comp123678_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	60118030	60118693	.	+	.	ID=comp123678_c1_seq1.mrna2;geneID=comp123678_c1_seq1.path2;Name=comp123678_c1_seq1;Dir=antisensecoverage=89.2;identity=98.6;matches=584;mismatches=8;indels=0;unknowns=0;locus=RLOC_00017727
Chr2	stalkie_big_nohaplotig	exon	60118030	60118246	100	+	.	Parent=comp123678_c1_seq1.mrna2;Target=comp123678_c1_seq1 448 664 -
Chr2	stalkie_big_nohaplotig	exon	60118319	60118693	97	+	.	Parent=comp123678_c1_seq1.mrna2;Target=comp123678_c1_seq1 73 447 -
Chr2	gffcl	locus	60119963	60120370	.	-	.	ID=RLOC_00017728;geneIDs=comp118266_c0_seq1.path1;transcripts=comp118266_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60119963	60120370	.	-	.	ID=comp118266_c0_seq1.mrna1;geneID=comp118266_c0_seq1.path1;Name=comp118266_c0_seq1;Dir=indeterminatecoverage=82.9;identity=100.0;matches=408;mismatches=0;indels=0;unknowns=0;Target=comp118266_c0_seq1 408 1 .;CDS_Target=comp118266_c0_seq1 363 304 .;locus=RLOC_00017728
Chr2	stalkie_big_nohaplotig	exon	60119963	60120370	100	-	.	Parent=comp118266_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60120008	60120067	.	-	0	Parent=comp118266_c0_seq1.mrna1
Chr2	gffcl	locus	60120443	60120876	.	+	.	ID=RLOC_00017729;geneIDs=comp153456_c0_seq1.path1;transcripts=comp153456_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60120443	60120876	.	+	.	ID=comp153456_c0_seq1.mrna1;geneID=comp153456_c0_seq1.path1;Name=comp153456_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.5;matches=419;mismatches=14;indels=1;unknowns=0;Target=comp153456_c0_seq1 433 1 .;CDS_Target=comp153456_c0_seq1 403 296 .;locus=RLOC_00017729
Chr2	stalkie_big_nohaplotig	exon	60120443	60120876	96	+	.	Parent=comp153456_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60120739	60120846	.	+	0	Parent=comp153456_c0_seq1.mrna1
Chr2	gffcl	locus	60121465	60121813	.	+	.	ID=RLOC_00017730;geneIDs=comp135070_c0_seq1.path1;transcripts=comp135070_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60121465	60121813	.	+	.	ID=comp135070_c0_seq1.mrna1;geneID=comp135070_c0_seq1.path1;Name=comp135070_c0_seq1;Dir=sensecoverage=100.0;identity=98.3;matches=281;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017730
Chr2	stalkie_big_nohaplotig	exon	60121465	60121611	96	+	.	Parent=comp135070_c0_seq1.mrna1;Target=comp135070_c0_seq1 1 147 +
Chr2	stalkie_big_nohaplotig	exon	60121675	60121813	100	+	.	Parent=comp135070_c0_seq1.mrna1;Target=comp135070_c0_seq1 148 286 +
Chr2	stalkie_big_nohaplotig	CDS	60121542	60121611	.	+	0	Parent=comp135070_c0_seq1.mrna1;Target=comp135070_c0_seq1 78 147 +
Chr2	stalkie_big_nohaplotig	CDS	60121675	60121811	.	+	2	Parent=comp135070_c0_seq1.mrna1;Target=comp135070_c0_seq1 148 284 +
Chr2	gffcl	locus	60121844	60122206	.	-	.	ID=RLOC_00017731;geneIDs=comp151235_c1_seq1.path1;transcripts=comp151235_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60121844	60122206	.	-	.	ID=comp151235_c1_seq1.mrna1;geneID=comp151235_c1_seq1.path1;Name=comp151235_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=354;mismatches=9;indels=0;unknowns=0;Target=comp151235_c1_seq1 363 1 .;CDS_Target=comp151235_c1_seq1 48 1 .;locus=RLOC_00017731
Chr2	stalkie_big_nohaplotig	exon	60121844	60122206	97	-	.	Parent=comp151235_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60122159	60122206	.	-	0	Parent=comp151235_c1_seq1.mrna1
Chr2	gffcl	locus	60124190	60124412	.	+	.	ID=RLOC_00017732;geneIDs=comp126828_c0_seq1.path1;transcripts=comp126828_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60124190	60124412	.	+	.	ID=comp126828_c0_seq1.mrna1;geneID=comp126828_c0_seq1.path1;Name=comp126828_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=219;mismatches=4;indels=0;unknowns=0;Target=comp126828_c0_seq1 223 1 .;CDS_Target=comp126828_c0_seq1 87 1 .;locus=RLOC_00017732
Chr2	stalkie_big_nohaplotig	exon	60124190	60124412	98	+	.	Parent=comp126828_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60124190	60124276	.	+	0	Parent=comp126828_c0_seq1.mrna1
Chr2	gffcl	locus	60124665	60141245	.	-	.	ID=RLOC_00017733;geneIDs=comp122413_c0_seq1.path1;transcripts=comp122413_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60124665	60141245	.	-	.	ID=comp122413_c0_seq1.mrna1;geneID=comp122413_c0_seq1.path1;Name=comp122413_c0_seq1;Dir=indeterminatecoverage=86.5;identity=95.2;matches=336;mismatches=17;indels=0;unknowns=0;Target=comp122413_c0_seq1 302 243 .;locus=RLOC_00017733
Chr2	stalkie_big_nohaplotig	exon	60124665	60125006	95	-	.	Parent=comp122413_c0_seq1.mrna1;Target=comp122413_c0_seq1 408 67 .
Chr2	stalkie_big_nohaplotig	exon	60141235	60141245	100	-	.	Parent=comp122413_c0_seq1.mrna1;Target=comp122413_c0_seq1 66 56 .
Chr2	stalkie_big_nohaplotig	CDS	60124771	60124830	.	-	0	Parent=comp122413_c0_seq1.mrna1
Chr2	gffcl	locus	60128322	60128624	.	+	.	ID=RLOC_00017734;geneIDs=comp113419_c0_seq1.path1;transcripts=comp113419_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60128322	60128624	.	+	.	ID=comp113419_c0_seq1.mrna1;geneID=comp113419_c0_seq1.path1;Name=comp113419_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.7;matches=287;mismatches=9;indels=7;unknowns=0;Target=comp113419_c0_seq1 296 1 .;CDS_Target=comp113419_c0_seq1 98 3 .;locus=RLOC_00017734
Chr2	stalkie_big_nohaplotig	exon	60128322	60128624	94	+	.	Parent=comp113419_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60128324	60128419	.	+	0	Parent=comp113419_c0_seq1.mrna1
Chr2	gffcl	locus	60151080	60151303	.	+	.	ID=RLOC_00017735;geneIDs=comp143459_c1_seq1.path1;transcripts=comp143459_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60151080	60151303	.	+	.	ID=comp143459_c1_seq1.mrna1;geneID=comp143459_c1_seq1.path1;Name=comp143459_c1_seq1;Dir=indeterminatecoverage=97.8;identity=100.0;matches=224;mismatches=0;indels=0;unknowns=0;Target=comp143459_c1_seq1 224 1 .;CDS_Target=comp143459_c1_seq1 100 2 .;locus=RLOC_00017735
Chr2	stalkie_big_nohaplotig	exon	60151080	60151303	100	+	.	Parent=comp143459_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60151081	60151179	.	+	0	Parent=comp143459_c1_seq1.mrna1
Chr2	gffcl	locus	60152739	60153223	.	+	.	ID=RLOC_00017736;geneIDs=comp149561_c0_seq1.path1;transcripts=comp149561_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60152739	60153223	.	+	.	ID=comp149561_c0_seq1.mrna1;geneID=comp149561_c0_seq1.path1;Name=comp149561_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=475;mismatches=10;indels=0;unknowns=0;Target=comp149561_c0_seq1 485 1 .;CDS_Target=comp149561_c0_seq1 313 38 .;locus=RLOC_00017736
Chr2	stalkie_big_nohaplotig	exon	60152739	60153223	97	+	.	Parent=comp149561_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60152776	60153051	.	+	0	Parent=comp149561_c0_seq1.mrna1
Chr2	gffcl	locus	60157015	60157667	.	+	.	ID=RLOC_00017737;geneIDs=comp146306_c0_seq1.path1;transcripts=comp146306_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60157015	60157667	.	+	.	ID=comp146306_c0_seq1.mrna1;geneID=comp146306_c0_seq1.path1;Name=comp146306_c0_seq1;Dir=sensecoverage=96.8;identity=99.3;matches=577;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017737
Chr2	stalkie_big_nohaplotig	exon	60157015	60157226	98	+	.	Parent=comp146306_c0_seq1.mrna1;Target=comp146306_c0_seq1 1 212 +
Chr2	stalkie_big_nohaplotig	exon	60157299	60157667	100	+	.	Parent=comp146306_c0_seq1.mrna1;Target=comp146306_c0_seq1 213 581 +
Chr2	stalkie_big_nohaplotig	CDS	60157157	60157226	.	+	0	Parent=comp146306_c0_seq1.mrna1;Target=comp146306_c0_seq1 143 212 +
Chr2	stalkie_big_nohaplotig	CDS	60157299	60157468	.	+	2	Parent=comp146306_c0_seq1.mrna1;Target=comp146306_c0_seq1 213 382 +
Chr2	gffcl	locus	60160367	60160983	.	+	.	ID=RLOC_00017738;geneIDs=comp135083_c0_seq1.path1;transcripts=comp135083_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60160367	60160983	.	+	.	ID=comp135083_c0_seq1.mrna1;geneID=comp135083_c0_seq1.path1;Name=comp135083_c0_seq1;Dir=sensecoverage=95.5;identity=97.7;matches=521;mismatches=9;indels=3;unknowns=0;locus=RLOC_00017738
Chr2	stalkie_big_nohaplotig	exon	60160367	60160560	96	+	.	Parent=comp135083_c0_seq1.mrna1;Target=comp135083_c0_seq1 2 196 +
Chr2	stalkie_big_nohaplotig	exon	60160647	60160983	98	+	.	Parent=comp135083_c0_seq1.mrna1;Target=comp135083_c0_seq1 197 533 +
Chr2	stalkie_big_nohaplotig	CDS	60160498	60160560	.	+	0	Parent=comp135083_c0_seq1.mrna1;Target=comp135083_c0_seq1 134 196 +
Chr2	stalkie_big_nohaplotig	CDS	60160647	60160787	.	+	0	Parent=comp135083_c0_seq1.mrna1;Target=comp135083_c0_seq1 197 337 +
Chr2	gffcl	locus	60164921	60165847	.	+	.	ID=RLOC_00017739;geneIDs=ORF2062.path1;transcripts=ORF2062.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60164921	60165847	.	+	.	ID=ORF2062.mrna1;geneID=ORF2062.path1;Name=ORF2062;Dir=indeterminatecoverage=100.0;identity=98.9;matches=917;mismatches=10;indels=0;unknowns=0;Target=ORF2062 927 1 .;locus=RLOC_00017739
Chr2	stalkie_big_nohaplotig	exon	60164921	60165847	98	+	.	Parent=ORF2062.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60164921	60165847	.	+	0	Parent=ORF2062.mrna1
Chr2	gffcl	locus	60247257	60256255	.	+	.	ID=RLOC_00017741;geneIDs=ORF2446.path1,comp159434_c0_seq1.path1;transcripts=comp159434_c0_seq1.mrna1,ORF2446.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60247257	60256255	.	+	.	ID=comp159434_c0_seq1.mrna1;geneID=comp159434_c0_seq1.path1;Name=comp159434_c0_seq1;Dir=antisensecoverage=99.2;identity=98.3;matches=1171;mismatches=20;indels=0;unknowns=0;locus=RLOC_00017741
Chr2	stalkie_big_nohaplotig	exon	60247257	60247378	98	+	.	Parent=comp159434_c0_seq1.mrna1;Target=comp159434_c0_seq1 1072 1193 -
Chr2	stalkie_big_nohaplotig	exon	60255132	60255250	99	+	.	Parent=comp159434_c0_seq1.mrna1;Target=comp159434_c0_seq1 953 1071 -
Chr2	stalkie_big_nohaplotig	exon	60255306	60256255	98	+	.	Parent=comp159434_c0_seq1.mrna1;Target=comp159434_c0_seq1 3 952 -
Chr2	stalkie_big_nohaplotig	CDS	60255137	60255250	.	+	0	Parent=comp159434_c0_seq1.mrna1;Target=comp159434_c0_seq1 953 1066 .
Chr2	stalkie_big_nohaplotig	CDS	60255306	60256004	.	+	0	Parent=comp159434_c0_seq1.mrna1;Target=comp159434_c0_seq1 254 952 .
Chr2	stalkie_big_nohaplotig	mRNA	60255089	60256001	.	+	.	ID=ORF2446.mrna1;geneID=ORF2446.path1;Name=ORF2446;Dir=sensecoverage=100.0;identity=98.3;matches=843;mismatches=15;indels=0;unknowns=0;locus=RLOC_00017741
Chr2	stalkie_big_nohaplotig	exon	60255089	60255250	99	+	.	Parent=ORF2446.mrna1;Target=ORF2446 1 162 +
Chr2	stalkie_big_nohaplotig	exon	60255306	60256001	97	+	.	Parent=ORF2446.mrna1;Target=ORF2446 163 858 +
Chr2	stalkie_big_nohaplotig	CDS	60255089	60255250	.	+	0	Parent=ORF2446.mrna1;Target=ORF2446 1 162 +
Chr2	stalkie_big_nohaplotig	CDS	60255306	60256001	.	+	0	Parent=ORF2446.mrna1;Target=ORF2446 163 858 +
Chr2	gffcl	locus	60297904	60298392	.	+	.	ID=RLOC_00017742;geneIDs=comp148718_c0_seq1.path1;transcripts=comp148718_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60297904	60298392	.	+	.	ID=comp148718_c0_seq1.mrna1;geneID=comp148718_c0_seq1.path1;Name=comp148718_c0_seq1;Dir=indeterminatecoverage=50.3;identity=92.6;matches=487;mismatches=2;indels=37;unknowns=0;Target=comp148718_c0_seq1 1046 521 .;CDS_Target=comp148718_c0_seq1 648 523 .;locus=RLOC_00017742
Chr2	stalkie_big_nohaplotig	exon	60297904	60298392	92	+	.	Parent=comp148718_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60297906	60298031	.	+	0	Parent=comp148718_c0_seq1.mrna1
Chr2	gffcl	locus	60331075	60332093	.	+	.	ID=RLOC_00017743;geneIDs=comp152012_c0_seq1.path1;transcripts=comp152012_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60331075	60332093	.	+	.	ID=comp152012_c0_seq1.mrna1;geneID=comp152012_c0_seq1.path1;Name=comp152012_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.3;matches=1013;mismatches=5;indels=2;unknowns=0;Target=comp152012_c0_seq1 1020 2 .;CDS_Target=comp152012_c0_seq1 308 153 .;locus=RLOC_00017743
Chr2	stalkie_big_nohaplotig	exon	60331075	60332093	99	+	.	Parent=comp152012_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60331226	60331381	.	+	0	Parent=comp152012_c0_seq1.mrna1
Chr2	gffcl	locus	60333332	60418108	.	+	.	ID=RLOC_00017744;geneIDs=FBgn0259247.1.path1;transcripts=FBgn0259247.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60333332	60418108	.	+	.	ID=FBgn0259247.1.mrna1;geneID=FBgn0259247.1.path1;Name=FBgn0259247.1;Dir=sensecoverage=91.6;identity=100.0;matches=2209;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017744
Chr2	stalkie_big_nohaplotig	exon	60333332	60333338	100	+	.	Parent=FBgn0259247.1.mrna1;Target=FBgn0259247.1 203 209 +
Chr2	stalkie_big_nohaplotig	exon	60336001	60336009	88	+	.	Parent=FBgn0259247.1.mrna1;Target=FBgn0259247.1 210 218 +
Chr2	stalkie_big_nohaplotig	exon	60337758	60338219	100	+	.	Parent=FBgn0259247.1.mrna1;Target=FBgn0259247.1 219 680 +
Chr2	stalkie_big_nohaplotig	exon	60342882	60343166	100	+	.	Parent=FBgn0259247.1.mrna1;Target=FBgn0259247.1 681 965 +
Chr2	stalkie_big_nohaplotig	exon	60406396	60406871	100	+	.	Parent=FBgn0259247.1.mrna1;Target=FBgn0259247.1 966 1441 +
Chr2	stalkie_big_nohaplotig	exon	60411225	60411409	100	+	.	Parent=FBgn0259247.1.mrna1;Target=FBgn0259247.1 1442 1626 +
Chr2	stalkie_big_nohaplotig	exon	60414189	60414384	100	+	.	Parent=FBgn0259247.1.mrna1;Target=FBgn0259247.1 1627 1822 +
Chr2	stalkie_big_nohaplotig	exon	60414445	60414657	100	+	.	Parent=FBgn0259247.1.mrna1;Target=FBgn0259247.1 1823 2035 +
Chr2	stalkie_big_nohaplotig	exon	60417675	60417905	100	+	.	Parent=FBgn0259247.1.mrna1;Target=FBgn0259247.1 2036 2266 +
Chr2	stalkie_big_nohaplotig	exon	60417963	60418108	100	+	.	Parent=FBgn0259247.1.mrna1;Target=FBgn0259247.1 2267 2412 +
Chr2	stalkie_big_nohaplotig	CDS	60333334	60333338	.	+	0	Parent=FBgn0259247.1.mrna1;Target=FBgn0259247.1 205 209 +
Chr2	stalkie_big_nohaplotig	CDS	60336001	60336009	.	+	1	Parent=FBgn0259247.1.mrna1;Target=FBgn0259247.1 210 218 +
Chr2	stalkie_big_nohaplotig	CDS	60337758	60338219	.	+	1	Parent=FBgn0259247.1.mrna1;Target=FBgn0259247.1 219 680 +
Chr2	stalkie_big_nohaplotig	CDS	60342882	60343166	.	+	1	Parent=FBgn0259247.1.mrna1;Target=FBgn0259247.1 681 965 +
Chr2	stalkie_big_nohaplotig	CDS	60406396	60406871	.	+	1	Parent=FBgn0259247.1.mrna1;Target=FBgn0259247.1 966 1441 +
Chr2	stalkie_big_nohaplotig	CDS	60411225	60411409	.	+	2	Parent=FBgn0259247.1.mrna1;Target=FBgn0259247.1 1442 1626 +
Chr2	stalkie_big_nohaplotig	CDS	60414189	60414384	.	+	0	Parent=FBgn0259247.1.mrna1;Target=FBgn0259247.1 1627 1822 +
Chr2	stalkie_big_nohaplotig	CDS	60414445	60414657	.	+	2	Parent=FBgn0259247.1.mrna1;Target=FBgn0259247.1 1823 2035 +
Chr2	stalkie_big_nohaplotig	CDS	60417675	60417905	.	+	2	Parent=FBgn0259247.1.mrna1;Target=FBgn0259247.1 2036 2266 +
Chr2	stalkie_big_nohaplotig	CDS	60417963	60418108	.	+	2	Parent=FBgn0259247.1.mrna1;Target=FBgn0259247.1 2267 2412 +
Chr2	gffcl	locus	60348253	60348698	.	-	.	ID=RLOC_00017745;geneIDs=comp127659_c0_seq1.path1;transcripts=comp127659_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60348253	60348698	.	-	.	ID=comp127659_c0_seq1.mrna1;geneID=comp127659_c0_seq1.path1;Name=comp127659_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.4;matches=407;mismatches=34;indels=9;unknowns=0;Target=comp127659_c0_seq1 445 1 .;CDS_Target=comp127659_c0_seq1 111 1 .;locus=RLOC_00017745
Chr2	stalkie_big_nohaplotig	exon	60348253	60348698	90	-	.	Parent=comp127659_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60348583	60348698	.	-	0	Parent=comp127659_c0_seq1.mrna1
Chr2	gffcl	locus	60367020	60368288	.	-	.	ID=RLOC_00017746;geneIDs=FBgn0033017.1.path1;transcripts=FBgn0033017.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60367020	60368288	.	-	.	ID=FBgn0033017.1.mrna1;geneID=FBgn0033017.1.path1;Name=FBgn0033017.1;Dir=sensecoverage=100.0;identity=99.6;matches=1055;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017746
Chr2	stalkie_big_nohaplotig	exon	60367020	60367738	99	-	.	Parent=FBgn0033017.1.mrna1;Target=FBgn0033017.1 341 1059 +
Chr2	stalkie_big_nohaplotig	exon	60367949	60368288	100	-	.	Parent=FBgn0033017.1.mrna1;Target=FBgn0033017.1 1 340 +
Chr2	stalkie_big_nohaplotig	CDS	60367020	60367738	.	-	2	Parent=FBgn0033017.1.mrna1;Target=FBgn0033017.1 341 1059 +
Chr2	stalkie_big_nohaplotig	CDS	60367949	60368288	.	-	0	Parent=FBgn0033017.1.mrna1;Target=FBgn0033017.1 1 340 +
Chr2	gffcl	locus	60412093	60413051	.	+	.	ID=RLOC_00017747;geneIDs=comp139739_c0_seq1.path1;transcripts=comp139739_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60412093	60413051	.	+	.	ID=comp139739_c0_seq1.mrna1;geneID=comp139739_c0_seq1.path1;Name=comp139739_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=955;mismatches=4;indels=0;unknowns=0;Target=comp139739_c0_seq1 959 1 .;CDS_Target=comp139739_c0_seq1 807 598 .;locus=RLOC_00017747
Chr2	stalkie_big_nohaplotig	exon	60412093	60413051	99	+	.	Parent=comp139739_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60412690	60412899	.	+	0	Parent=comp139739_c0_seq1.mrna1
Chr2	gffcl	locus	60425467	60426502	.	+	.	ID=RLOC_00017748;geneIDs=FBgn0033019.1.path1;transcripts=FBgn0033019.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60425467	60426502	.	+	.	ID=FBgn0033019.1.mrna1;geneID=FBgn0033019.1.path1;Name=FBgn0033019.1;Dir=sensecoverage=100.0;identity=97.5;matches=954;mismatches=24;indels=0;unknowns=0;locus=RLOC_00017748
Chr2	stalkie_big_nohaplotig	exon	60425467	60425491	100	+	.	Parent=FBgn0033019.1.mrna1;Target=FBgn0033019.1 1 25 +
Chr2	stalkie_big_nohaplotig	exon	60425550	60426502	97	+	.	Parent=FBgn0033019.1.mrna1;Target=FBgn0033019.1 26 978 +
Chr2	stalkie_big_nohaplotig	CDS	60425467	60425491	.	+	0	Parent=FBgn0033019.1.mrna1;Target=FBgn0033019.1 1 25 +
Chr2	stalkie_big_nohaplotig	CDS	60425550	60426502	.	+	2	Parent=FBgn0033019.1.mrna1;Target=FBgn0033019.1 26 978 +
Chr2	gffcl	locus	60428805	60430073	.	-	.	ID=RLOC_00017749;geneIDs=FBgn0033017.1.path2;transcripts=FBgn0033017.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	60428805	60430073	.	-	.	ID=FBgn0033017.1.mrna2;geneID=FBgn0033017.1.path2;Name=FBgn0033017.1;Dir=sensecoverage=100.0;identity=99.6;matches=1055;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017749
Chr2	stalkie_big_nohaplotig	exon	60428805	60429523	99	-	.	Parent=FBgn0033017.1.mrna2;Target=FBgn0033017.1 341 1059 +
Chr2	stalkie_big_nohaplotig	exon	60429734	60430073	100	-	.	Parent=FBgn0033017.1.mrna2;Target=FBgn0033017.1 1 340 +
Chr2	stalkie_big_nohaplotig	CDS	60428805	60429523	.	-	2	Parent=FBgn0033017.1.mrna2;Target=FBgn0033017.1 341 1059 +
Chr2	stalkie_big_nohaplotig	CDS	60429734	60430073	.	-	0	Parent=FBgn0033017.1.mrna2;Target=FBgn0033017.1 1 340 +
Chr2	gffcl	locus	60431726	60433247	.	+	.	ID=RLOC_00017750;geneIDs=comp160122_c0_seq1.path1;transcripts=comp160122_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60431726	60433247	.	+	.	ID=comp160122_c0_seq1.mrna1;geneID=comp160122_c0_seq1.path1;Name=comp160122_c0_seq1;Dir=sensecoverage=99.9;identity=98.2;matches=1437;mismatches=25;indels=1;unknowns=0;locus=RLOC_00017750
Chr2	stalkie_big_nohaplotig	exon	60431726	60432494	97	+	.	Parent=comp160122_c0_seq1.mrna1;Target=comp160122_c0_seq1 1 770 +
Chr2	stalkie_big_nohaplotig	exon	60432555	60433247	98	+	.	Parent=comp160122_c0_seq1.mrna1;Target=comp160122_c0_seq1 771 1463 +
Chr2	stalkie_big_nohaplotig	CDS	60431939	60432494	.	+	0	Parent=comp160122_c0_seq1.mrna1;Target=comp160122_c0_seq1 214 770 +
Chr2	stalkie_big_nohaplotig	CDS	60432555	60432594	.	+	2	Parent=comp160122_c0_seq1.mrna1;Target=comp160122_c0_seq1 771 810 +
Chr2	gffcl	locus	60438100	60438718	.	+	.	ID=RLOC_00017751;geneIDs=comp152347_c0_seq1.path1;transcripts=comp152347_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60438100	60438718	.	+	.	ID=comp152347_c0_seq1.mrna1;geneID=comp152347_c0_seq1.path1;Name=comp152347_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.7;matches=603;mismatches=13;indels=21;unknowns=0;Target=comp152347_c0_seq1 634 1 .;CDS_Target=comp152347_c0_seq1 82 2 .;locus=RLOC_00017751
Chr2	stalkie_big_nohaplotig	exon	60438100	60438718	94	+	.	Parent=comp152347_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60438101	60438173	.	+	0	Parent=comp152347_c0_seq1.mrna1
Chr2	gffcl	locus	60447498	60451100	.	+	.	ID=RLOC_00017753;geneIDs=comp159441_c0_seq1.path1;transcripts=comp159441_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60447498	60451100	.	+	.	ID=comp159441_c0_seq1.mrna1;geneID=comp159441_c0_seq1.path1;Name=comp159441_c0_seq1;Dir=sensecoverage=68.0;identity=94.8;matches=753;mismatches=14;indels=27;unknowns=0;locus=RLOC_00017753
Chr2	stalkie_big_nohaplotig	exon	60447498	60447883	90	+	.	Parent=comp159441_c0_seq1.mrna1;Target=comp159441_c0_seq1 9 417 +
Chr2	stalkie_big_nohaplotig	exon	60450577	60450734	98	+	.	Parent=comp159441_c0_seq1.mrna1;Target=comp159441_c0_seq1 418 575 +
Chr2	stalkie_big_nohaplotig	exon	60450796	60450919	100	+	.	Parent=comp159441_c0_seq1.mrna1;Target=comp159441_c0_seq1 576 699 +
Chr2	stalkie_big_nohaplotig	exon	60451000	60451100	99	+	.	Parent=comp159441_c0_seq1.mrna1;Target=comp159441_c0_seq1 700 800 +
Chr2	stalkie_big_nohaplotig	CDS	60450596	60450734	.	+	0	Parent=comp159441_c0_seq1.mrna1;Target=comp159441_c0_seq1 437 575 +
Chr2	stalkie_big_nohaplotig	CDS	60450796	60450919	.	+	2	Parent=comp159441_c0_seq1.mrna1;Target=comp159441_c0_seq1 576 699 +
Chr2	stalkie_big_nohaplotig	CDS	60451000	60451099	.	+	1	Parent=comp159441_c0_seq1.mrna1;Target=comp159441_c0_seq1 700 799 +
Chr2	gffcl	locus	60478765	60480755	.	+	.	ID=RLOC_00017754;geneIDs=comp160313_c0_seq1.path1;transcripts=comp160313_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60478765	60480755	.	+	.	ID=comp160313_c0_seq1.mrna1;geneID=comp160313_c0_seq1.path1;Name=comp160313_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1968;mismatches=3;indels=20;unknowns=0;Target=comp160313_c0_seq1 1971 1 .;CDS_Target=comp160313_c0_seq1 1333 1139 .;locus=RLOC_00017754
Chr2	stalkie_big_nohaplotig	exon	60478765	60480755	98	+	.	Parent=comp160313_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60479903	60480097	.	+	0	Parent=comp160313_c0_seq1.mrna1
Chr2	gffcl	locus	60481612	60482304	.	-	.	ID=RLOC_00017755;geneIDs=comp135776_c0_seq1.path1;transcripts=comp135776_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60481612	60482304	.	-	.	ID=comp135776_c0_seq1.mrna1;geneID=comp135776_c0_seq1.path1;Name=comp135776_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=690;mismatches=3;indels=0;unknowns=0;Target=comp135776_c0_seq1 693 1 .;CDS_Target=comp135776_c0_seq1 498 322 .;locus=RLOC_00017755
Chr2	stalkie_big_nohaplotig	exon	60481612	60482304	99	-	.	Parent=comp135776_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60481807	60481983	.	-	0	Parent=comp135776_c0_seq1.mrna1
Chr2	gffcl	locus	60483007	60483629	.	+	.	ID=RLOC_00017756;geneIDs=comp154406_c0_seq1.path1;transcripts=comp154406_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60483007	60483629	.	+	.	ID=comp154406_c0_seq1.mrna1;geneID=comp154406_c0_seq1.path1;Name=comp154406_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=622;mismatches=1;indels=0;unknowns=0;Target=comp154406_c0_seq1 623 1 .;CDS_Target=comp154406_c0_seq1 252 157 .;locus=RLOC_00017756
Chr2	stalkie_big_nohaplotig	exon	60483007	60483629	99	+	.	Parent=comp154406_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60483163	60483258	.	+	0	Parent=comp154406_c0_seq1.mrna1
Chr2	gffcl	locus	60484536	62354470	.	+	.	ID=RLOC_00017757;geneIDs=comp149543_c0_seq1.path1;transcripts=comp149543_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60484536	62354470	.	+	.	ID=comp149543_c0_seq1.mrna1;geneID=comp149543_c0_seq1.path1;Name=comp149543_c0_seq1;Dir=indeterminatecoverage=85.8;identity=91.5;matches=518;mismatches=5;indels=43;unknowns=0;Target=comp149543_c0_seq1 175 2 .;locus=RLOC_00017757
Chr2	stalkie_big_nohaplotig	exon	60484536	60484975	100	+	.	Parent=comp149543_c0_seq1.mrna1;Target=comp149543_c0_seq1 440 1 .
Chr2	stalkie_big_nohaplotig	exon	62336296	62336306	100	+	.	Parent=comp149543_c0_seq1.mrna1;Target=comp149543_c0_seq1 451 441 .
Chr2	stalkie_big_nohaplotig	exon	62341296	62341298	100	+	.	Parent=comp149543_c0_seq1.mrna1;Target=comp149543_c0_seq1 454 452 .
Chr2	stalkie_big_nohaplotig	exon	62341574	62341578	100	+	.	Parent=comp149543_c0_seq1.mrna1;Target=comp149543_c0_seq1 459 455 .
Chr2	stalkie_big_nohaplotig	exon	62343144	62343168	46	+	.	Parent=comp149543_c0_seq1.mrna1;Target=comp149543_c0_seq1 502 460 .
Chr2	stalkie_big_nohaplotig	exon	62343436	62343444	100	+	.	Parent=comp149543_c0_seq1.mrna1;Target=comp149543_c0_seq1 511 503 .
Chr2	stalkie_big_nohaplotig	exon	62346007	62346019	34	+	.	Parent=comp149543_c0_seq1.mrna1;Target=comp149543_c0_seq1 549 512 .
Chr2	stalkie_big_nohaplotig	exon	62350801	62350808	100	+	.	Parent=comp149543_c0_seq1.mrna1;Target=comp149543_c0_seq1 557 550 .
Chr2	stalkie_big_nohaplotig	exon	62354462	62354470	100	+	.	Parent=comp149543_c0_seq1.mrna1;Target=comp149543_c0_seq1 566 558 .
Chr2	stalkie_big_nohaplotig	CDS	60484537	60484710	.	+	0	Parent=comp149543_c0_seq1.mrna1
Chr2	gffcl	locus	60485037	60485485	.	+	.	ID=RLOC_00017758;geneIDs=comp137647_c0_seq1.path1;transcripts=comp137647_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60485037	60485485	.	+	.	ID=comp137647_c0_seq1.mrna1;geneID=comp137647_c0_seq1.path1;Name=comp137647_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=445;mismatches=0;indels=4;unknowns=0;Target=comp137647_c0_seq1 445 1 .;CDS_Target=comp137647_c0_seq1 443 384 .;locus=RLOC_00017758
Chr2	stalkie_big_nohaplotig	exon	60485037	60485485	99	+	.	Parent=comp137647_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60485424	60485483	.	+	0	Parent=comp137647_c0_seq1.mrna1
Chr2	gffcl	locus	60496070	60498605	.	-	.	ID=RLOC_00017760;geneIDs=FBgn0259682.1.path1;transcripts=FBgn0259682.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60496070	60498605	.	-	.	ID=FBgn0259682.1.mrna1;geneID=FBgn0259682.1.path1;Name=FBgn0259682.1;Dir=sensecoverage=100.0;identity=99.2;matches=1307;mismatches=10;indels=0;unknowns=0;locus=RLOC_00017760
Chr2	stalkie_big_nohaplotig	exon	60496070	60496212	99	-	.	Parent=FBgn0259682.1.mrna1;Target=FBgn0259682.1 1175 1317 +
Chr2	stalkie_big_nohaplotig	exon	60496282	60496365	100	-	.	Parent=FBgn0259682.1.mrna1;Target=FBgn0259682.1 1091 1174 +
Chr2	stalkie_big_nohaplotig	exon	60497332	60497551	98	-	.	Parent=FBgn0259682.1.mrna1;Target=FBgn0259682.1 871 1090 +
Chr2	stalkie_big_nohaplotig	exon	60497609	60497839	100	-	.	Parent=FBgn0259682.1.mrna1;Target=FBgn0259682.1 640 870 +
Chr2	stalkie_big_nohaplotig	exon	60497905	60498278	98	-	.	Parent=FBgn0259682.1.mrna1;Target=FBgn0259682.1 266 639 +
Chr2	stalkie_big_nohaplotig	exon	60498341	60498605	99	-	.	Parent=FBgn0259682.1.mrna1;Target=FBgn0259682.1 1 265 +
Chr2	stalkie_big_nohaplotig	CDS	60496070	60496212	.	-	2	Parent=FBgn0259682.1.mrna1;Target=FBgn0259682.1 1175 1317 +
Chr2	stalkie_big_nohaplotig	CDS	60496282	60496365	.	-	2	Parent=FBgn0259682.1.mrna1;Target=FBgn0259682.1 1091 1174 +
Chr2	stalkie_big_nohaplotig	CDS	60497332	60497551	.	-	0	Parent=FBgn0259682.1.mrna1;Target=FBgn0259682.1 871 1090 +
Chr2	stalkie_big_nohaplotig	CDS	60497609	60497839	.	-	0	Parent=FBgn0259682.1.mrna1;Target=FBgn0259682.1 640 870 +
Chr2	stalkie_big_nohaplotig	CDS	60497905	60498278	.	-	2	Parent=FBgn0259682.1.mrna1;Target=FBgn0259682.1 266 639 +
Chr2	stalkie_big_nohaplotig	CDS	60498341	60498605	.	-	0	Parent=FBgn0259682.1.mrna1;Target=FBgn0259682.1 1 265 +
Chr2	gffcl	locus	60496367	60496976	.	-	.	ID=RLOC_00017761;geneIDs=comp116695_c0_seq1.path1;transcripts=comp116695_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60496367	60496976	.	-	.	ID=comp116695_c0_seq1.mrna1;geneID=comp116695_c0_seq1.path1;Name=comp116695_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=547;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017761
Chr2	stalkie_big_nohaplotig	exon	60496367	60496890	99	-	.	Parent=comp116695_c0_seq1.mrna1;Target=comp116695_c0_seq1 1 524 -
Chr2	stalkie_big_nohaplotig	exon	60496953	60496976	100	-	.	Parent=comp116695_c0_seq1.mrna1;Target=comp116695_c0_seq1 525 548 -
Chr2	stalkie_big_nohaplotig	CDS	60496576	60496890	.	-	0	Parent=comp116695_c0_seq1.mrna1;Target=comp116695_c0_seq1 210 524 .
Chr2	stalkie_big_nohaplotig	CDS	60496953	60496976	.	-	0	Parent=comp116695_c0_seq1.mrna1;Target=comp116695_c0_seq1 525 548 .
Chr2	gffcl	locus	60536398	62372914	.	-	.	ID=RLOC_00017762;geneIDs=comp150535_c0_seq1.path1;transcripts=comp150535_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60536398	62372914	.	-	.	ID=comp150535_c0_seq1.mrna1;geneID=comp150535_c0_seq1.path1;Name=comp150535_c0_seq1;Dir=indeterminatecoverage=95.1;identity=89.4;matches=1168;mismatches=74;indels=65;unknowns=0;locus=RLOC_00017762
Chr2	stalkie_big_nohaplotig	exon	60536398	60536403	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 1423 1418 .
Chr2	stalkie_big_nohaplotig	exon	60537724	60537731	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 1415 1408 .
Chr2	stalkie_big_nohaplotig	exon	60537766	60537774	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 1377 1369 .
Chr2	stalkie_big_nohaplotig	exon	60542623	60542627	83	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 1368 1363 .
Chr2	stalkie_big_nohaplotig	exon	60544679	60544694	87	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 1362 1347 .
Chr2	stalkie_big_nohaplotig	exon	60545615	60545688	53	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 1346 1276 .
Chr2	stalkie_big_nohaplotig	exon	60549059	60549062	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 1237 1234 .
Chr2	stalkie_big_nohaplotig	exon	60554930	60554937	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 1233 1226 .
Chr2	stalkie_big_nohaplotig	exon	60554954	60554961	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 1181 1174 .
Chr2	stalkie_big_nohaplotig	exon	60555248	60555250	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 1166 1164 .
Chr2	stalkie_big_nohaplotig	exon	60558122	60558130	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 1163 1155 .
Chr2	stalkie_big_nohaplotig	exon	60560183	60560195	84	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 1154 1142 .
Chr2	stalkie_big_nohaplotig	exon	60561219	60561223	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 1141 1137 .
Chr2	stalkie_big_nohaplotig	exon	60569403	60569447	47	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 1136 1091 .
Chr2	stalkie_big_nohaplotig	exon	60584796	60584808	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 1090 1078 .
Chr2	stalkie_big_nohaplotig	exon	60587805	60587824	20	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 1077 1027 .
Chr2	stalkie_big_nohaplotig	exon	60590321	60590346	74	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 1026 1002 .
Chr2	stalkie_big_nohaplotig	exon	60594773	60594783	72	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 1001 991 .
Chr2	stalkie_big_nohaplotig	exon	60599990	60599997	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 990 983 .
Chr2	stalkie_big_nohaplotig	exon	60614098	60614104	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 982 976 .
Chr2	stalkie_big_nohaplotig	exon	60622938	60622946	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 957 949 .
Chr2	stalkie_big_nohaplotig	exon	60630003	60630004	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 948 947 .
Chr2	stalkie_big_nohaplotig	exon	60631100	60631103	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 946 943 .
Chr2	stalkie_big_nohaplotig	exon	60639150	60639153	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 942 939 .
Chr2	stalkie_big_nohaplotig	exon	60640856	60640871	75	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 938 923 .
Chr2	stalkie_big_nohaplotig	exon	60641101	60641108	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 922 915 .
Chr2	stalkie_big_nohaplotig	exon	60643243	60643253	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 914 904 .
Chr2	stalkie_big_nohaplotig	exon	60644442	60644446	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 903 899 .
Chr2	stalkie_big_nohaplotig	exon	60644694	60644700	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 898 892 .
Chr2	stalkie_big_nohaplotig	exon	60649713	60649731	47	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 891 877 .
Chr2	stalkie_big_nohaplotig	exon	60661694	60661703	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 876 867 .
Chr2	stalkie_big_nohaplotig	exon	60662944	60662951	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 866 859 .
Chr2	stalkie_big_nohaplotig	exon	60663363	60663366	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 858 855 .
Chr2	stalkie_big_nohaplotig	exon	60671478	60671487	80	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 854 845 .
Chr2	stalkie_big_nohaplotig	exon	60671833	60671834	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 844 843 .
Chr2	stalkie_big_nohaplotig	exon	60679823	60679826	100	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 842 839 .
Chr2	stalkie_big_nohaplotig	exon	62372077	62372914	99	-	.	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 838 1 .
Chr2	stalkie_big_nohaplotig	CDS	60644694	60644700	.	-	0	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 898 892 .
Chr2	stalkie_big_nohaplotig	CDS	60649713	60649731	.	-	1	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 891 877 .
Chr2	stalkie_big_nohaplotig	CDS	60661694	60661695	.	-	0	Parent=comp150535_c0_seq1.mrna1;Target=comp150535_c0_seq1 876 875 .
Chr2	gffcl	locus	60538488	60572993	.	+	.	ID=RLOC_00017763;geneIDs=FBgn0034389.1.path1;transcripts=FBgn0034389.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60538488	60572993	.	+	.	ID=FBgn0034389.1.mrna1;geneID=FBgn0034389.1.path1;Name=FBgn0034389.1;Dir=sensecoverage=100.0;identity=99.3;matches=2705;mismatches=19;indels=0;unknowns=0;locus=RLOC_00017763
Chr2	stalkie_big_nohaplotig	exon	60538488	60538524	100	+	.	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 1 37 +
Chr2	stalkie_big_nohaplotig	exon	60558958	60559559	98	+	.	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 38 639 +
Chr2	stalkie_big_nohaplotig	exon	60560275	60560383	100	+	.	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 640 748 +
Chr2	stalkie_big_nohaplotig	exon	60560465	60560607	98	+	.	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 749 891 +
Chr2	stalkie_big_nohaplotig	exon	60563003	60563194	100	+	.	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 892 1083 +
Chr2	stalkie_big_nohaplotig	exon	60569136	60569287	100	+	.	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 1084 1235 +
Chr2	stalkie_big_nohaplotig	exon	60569432	60569947	99	+	.	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 1236 1751 +
Chr2	stalkie_big_nohaplotig	exon	60571666	60571846	100	+	.	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 1752 1932 +
Chr2	stalkie_big_nohaplotig	exon	60571917	60572095	98	+	.	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 1933 2111 +
Chr2	stalkie_big_nohaplotig	exon	60572196	60572315	100	+	.	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 2112 2231 +
Chr2	stalkie_big_nohaplotig	exon	60572373	60572579	100	+	.	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 2232 2438 +
Chr2	stalkie_big_nohaplotig	exon	60572642	60572849	100	+	.	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 2439 2646 +
Chr2	stalkie_big_nohaplotig	exon	60572916	60572993	100	+	.	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 2647 2724 +
Chr2	stalkie_big_nohaplotig	CDS	60538488	60538524	.	+	0	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 1 37 +
Chr2	stalkie_big_nohaplotig	CDS	60558958	60559559	.	+	2	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 38 639 +
Chr2	stalkie_big_nohaplotig	CDS	60560275	60560383	.	+	0	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 640 748 +
Chr2	stalkie_big_nohaplotig	CDS	60560465	60560607	.	+	2	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 749 891 +
Chr2	stalkie_big_nohaplotig	CDS	60563003	60563194	.	+	0	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 892 1083 +
Chr2	stalkie_big_nohaplotig	CDS	60569136	60569287	.	+	0	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 1084 1235 +
Chr2	stalkie_big_nohaplotig	CDS	60569432	60569947	.	+	1	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 1236 1751 +
Chr2	stalkie_big_nohaplotig	CDS	60571666	60571846	.	+	1	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 1752 1932 +
Chr2	stalkie_big_nohaplotig	CDS	60571917	60572095	.	+	0	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 1933 2111 +
Chr2	stalkie_big_nohaplotig	CDS	60572196	60572315	.	+	1	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 2112 2231 +
Chr2	stalkie_big_nohaplotig	CDS	60572373	60572579	.	+	1	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 2232 2438 +
Chr2	stalkie_big_nohaplotig	CDS	60572642	60572849	.	+	1	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 2439 2646 +
Chr2	stalkie_big_nohaplotig	CDS	60572916	60572993	.	+	0	Parent=FBgn0034389.1.mrna1;Target=FBgn0034389.1 2647 2724 +
Chr2	gffcl	locus	60579012	60580196	.	-	.	ID=RLOC_00017764;geneIDs=FBgn0034390.1.path1;transcripts=FBgn0034390.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60579012	60580196	.	-	.	ID=FBgn0034390.1.mrna1;geneID=FBgn0034390.1.path1;Name=FBgn0034390.1;Dir=sensecoverage=100.0;identity=98.7;matches=1081;mismatches=14;indels=0;unknowns=0;Target=FBgn0034390.1 124 1095 +;locus=RLOC_00017764
Chr2	stalkie_big_nohaplotig	exon	60579012	60580011	99	-	.	Parent=FBgn0034390.1.mrna1;Target=FBgn0034390.1 96 1095 +
Chr2	stalkie_big_nohaplotig	exon	60580102	60580196	94	-	.	Parent=FBgn0034390.1.mrna1;Target=FBgn0034390.1 1 95 +
Chr2	stalkie_big_nohaplotig	CDS	60579012	60579983	.	-	0	Parent=FBgn0034390.1.mrna1
Chr2	gffcl	locus	60637778	60638305	.	+	.	ID=RLOC_00017765;geneIDs=FBgn0039916.1.path2;transcripts=FBgn0039916.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	60637778	60638305	.	+	.	ID=FBgn0039916.1.mrna2;geneID=FBgn0039916.1.path2;Name=FBgn0039916.1;Dir=sensecoverage=17.2;identity=100.0;matches=467;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017765
Chr2	stalkie_big_nohaplotig	exon	60637778	60637966	100	+	.	Parent=FBgn0039916.1.mrna2;Target=FBgn0039916.1 2243 2431 +
Chr2	stalkie_big_nohaplotig	exon	60638028	60638305	100	+	.	Parent=FBgn0039916.1.mrna2;Target=FBgn0039916.1 2432 2709 +
Chr2	stalkie_big_nohaplotig	CDS	60637778	60637966	.	+	1	Parent=FBgn0039916.1.mrna2;Target=FBgn0039916.1 2243 2431 +
Chr2	stalkie_big_nohaplotig	CDS	60638028	60638305	.	+	1	Parent=FBgn0039916.1.mrna2;Target=FBgn0039916.1 2432 2709 +
Chr2	gffcl	locus	60652811	60655045	.	.	.	ID=RLOC_00017766;geneIDs=FBgn0034391.path1,comp163653_c1_seq1.path1;transcripts=FBgn0034391.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60652811	60655045	.	+	.	ID=FBgn0034391.mrna1;geneID=FBgn0034391.path1;Name=FBgn0034391;Dir=indeterminatecoverage=100.0;identity=99.8;matches=2229;mismatches=4;indels=0;unknowns=2;Target=FBgn0034391 2235 1 .;locus=RLOC_00017766
Chr2	stalkie_big_nohaplotig	exon	60652811	60655045	99	+	.	Parent=FBgn0034391.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60652811	60655045	.	+	0	Parent=FBgn0034391.mrna1
Chr2	gffcl	locus	60660579	60661357	.	-	.	ID=RLOC_00017767;geneIDs=FBgn0031458.1.path1;transcripts=FBgn0031458.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60660579	60661357	.	-	.	ID=FBgn0031458.1.mrna1;geneID=FBgn0031458.1.path1;Name=FBgn0031458.1;Dir=sensecoverage=100.0;identity=99.4;matches=716;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017767
Chr2	stalkie_big_nohaplotig	exon	60660579	60660899	99	-	.	Parent=FBgn0031458.1.mrna1;Target=FBgn0031458.1 400 720 +
Chr2	stalkie_big_nohaplotig	exon	60660959	60661357	99	-	.	Parent=FBgn0031458.1.mrna1;Target=FBgn0031458.1 1 399 +
Chr2	stalkie_big_nohaplotig	CDS	60660579	60660899	.	-	0	Parent=FBgn0031458.1.mrna1;Target=FBgn0031458.1 400 720 +
Chr2	stalkie_big_nohaplotig	CDS	60660959	60661357	.	-	0	Parent=FBgn0031458.1.mrna1;Target=FBgn0031458.1 1 399 +
Chr2	gffcl	locus	60663568	60664844	.	-	.	ID=RLOC_00017768;geneIDs=FBgn0034392.2.path1;transcripts=FBgn0034392.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60663568	60664844	.	-	.	ID=FBgn0034392.2.mrna1;geneID=FBgn0034392.2.path1;Name=FBgn0034392.2;Dir=sensecoverage=100.0;identity=98.7;matches=1199;mismatches=16;indels=0;unknowns=0;locus=RLOC_00017768
Chr2	stalkie_big_nohaplotig	exon	60663568	60663768	99	-	.	Parent=FBgn0034392.2.mrna1;Target=FBgn0034392.2 1015 1215 +
Chr2	stalkie_big_nohaplotig	exon	60663831	60664844	98	-	.	Parent=FBgn0034392.2.mrna1;Target=FBgn0034392.2 1 1014 +
Chr2	stalkie_big_nohaplotig	CDS	60663568	60663768	.	-	0	Parent=FBgn0034392.2.mrna1;Target=FBgn0034392.2 1015 1215 +
Chr2	stalkie_big_nohaplotig	CDS	60663831	60664844	.	-	0	Parent=FBgn0034392.2.mrna1;Target=FBgn0034392.2 1 1014 +
Chr2	gffcl	locus	60666501	60668425	.	-	.	ID=RLOC_00017769;geneIDs=FBgn0034392.1.path1;transcripts=FBgn0034392.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60666501	60668425	.	-	.	ID=FBgn0034392.1.mrna1;geneID=FBgn0034392.1.path1;Name=FBgn0034392.1;Dir=sensecoverage=100.0;identity=99.7;matches=1498;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017769
Chr2	stalkie_big_nohaplotig	exon	60666501	60666701	98	-	.	Parent=FBgn0034392.1.mrna1;Target=FBgn0034392.1 1303 1503 +
Chr2	stalkie_big_nohaplotig	exon	60666774	60667865	99	-	.	Parent=FBgn0034392.1.mrna1;Target=FBgn0034392.1 211 1302 +
Chr2	stalkie_big_nohaplotig	exon	60668150	60668286	100	-	.	Parent=FBgn0034392.1.mrna1;Target=FBgn0034392.1 74 210 +
Chr2	stalkie_big_nohaplotig	exon	60668353	60668425	100	-	.	Parent=FBgn0034392.1.mrna1;Target=FBgn0034392.1 1 73 +
Chr2	stalkie_big_nohaplotig	CDS	60666501	60666701	.	-	0	Parent=FBgn0034392.1.mrna1;Target=FBgn0034392.1 1303 1503 +
Chr2	stalkie_big_nohaplotig	CDS	60666774	60667865	.	-	0	Parent=FBgn0034392.1.mrna1;Target=FBgn0034392.1 211 1302 +
Chr2	stalkie_big_nohaplotig	CDS	60668150	60668286	.	-	2	Parent=FBgn0034392.1.mrna1;Target=FBgn0034392.1 74 210 +
Chr2	stalkie_big_nohaplotig	CDS	60668353	60668425	.	-	0	Parent=FBgn0034392.1.mrna1;Target=FBgn0034392.1 1 73 +
Chr2	gffcl	locus	60672138	60673695	.	-	.	ID=RLOC_00017770;geneIDs=FBgn0010651.1.path1;transcripts=FBgn0010651.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60672138	60673695	.	-	.	ID=FBgn0010651.1.mrna1;geneID=FBgn0010651.1.path1;Name=FBgn0010651.1;Dir=sensecoverage=97.5;identity=99.6;matches=1422;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017770
Chr2	stalkie_big_nohaplotig	exon	60672138	60672353	99	-	.	Parent=FBgn0010651.1.mrna1;Target=FBgn0010651.1 1249 1464 +
Chr2	stalkie_big_nohaplotig	exon	60672422	60673495	99	-	.	Parent=FBgn0010651.1.mrna1;Target=FBgn0010651.1 175 1248 +
Chr2	stalkie_big_nohaplotig	exon	60673559	60673695	99	-	.	Parent=FBgn0010651.1.mrna1;Target=FBgn0010651.1 38 174 +
Chr2	stalkie_big_nohaplotig	CDS	60672138	60672353	.	-	0	Parent=FBgn0010651.1.mrna1;Target=FBgn0010651.1 1249 1464 +
Chr2	stalkie_big_nohaplotig	CDS	60672422	60673495	.	-	0	Parent=FBgn0010651.1.mrna1;Target=FBgn0010651.1 175 1248 +
Chr2	stalkie_big_nohaplotig	CDS	60673559	60673693	.	-	0	Parent=FBgn0010651.1.mrna1;Target=FBgn0010651.1 40 174 +
Chr2	gffcl	locus	60672516	60748558	.	+	.	ID=RLOC_00017771;geneIDs=comp156283_c0_seq1.path1;transcripts=comp156283_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60672516	60748558	.	+	.	ID=comp156283_c0_seq1.mrna1;geneID=comp156283_c0_seq1.path1;Name=comp156283_c0_seq1;Dir=indeterminatecoverage=84.3;identity=90.1;matches=1399;mismatches=76;indels=78;unknowns=0;Target=comp156283_c0_seq1 629 594 .;locus=RLOC_00017771
Chr2	stalkie_big_nohaplotig	exon	60672516	60672526	100	+	.	Parent=comp156283_c0_seq1.mrna1;Target=comp156283_c0_seq1 198 188 .
Chr2	stalkie_big_nohaplotig	exon	60678355	60678363	100	+	.	Parent=comp156283_c0_seq1.mrna1;Target=comp156283_c0_seq1 217 209 .
Chr2	stalkie_big_nohaplotig	exon	60686576	60686591	75	+	.	Parent=comp156283_c0_seq1.mrna1;Target=comp156283_c0_seq1 252 240 .
Chr2	stalkie_big_nohaplotig	exon	60701656	60701681	57	+	.	Parent=comp156283_c0_seq1.mrna1;Target=comp156283_c0_seq1 276 253 .
Chr2	stalkie_big_nohaplotig	exon	60707752	60707763	100	+	.	Parent=comp156283_c0_seq1.mrna1;Target=comp156283_c0_seq1 288 277 .
Chr2	stalkie_big_nohaplotig	exon	60715004	60715005	100	+	.	Parent=comp156283_c0_seq1.mrna1;Target=comp156283_c0_seq1 290 289 .
Chr2	stalkie_big_nohaplotig	exon	60720456	60720458	100	+	.	Parent=comp156283_c0_seq1.mrna1;Target=comp156283_c0_seq1 293 291 .
Chr2	stalkie_big_nohaplotig	exon	60728903	60728914	100	+	.	Parent=comp156283_c0_seq1.mrna1;Target=comp156283_c0_seq1 305 294 .
Chr2	stalkie_big_nohaplotig	exon	60731368	60731380	84	+	.	Parent=comp156283_c0_seq1.mrna1;Target=comp156283_c0_seq1 322 310 .
Chr2	stalkie_big_nohaplotig	exon	60747141	60748558	90	+	.	Parent=comp156283_c0_seq1.mrna1;Target=comp156283_c0_seq1 1725 323 .
Chr2	stalkie_big_nohaplotig	CDS	60747425	60747460	.	+	0	Parent=comp156283_c0_seq1.mrna1
Chr2	gffcl	locus	60689849	62634132	.	-	.	ID=RLOC_00017772;geneIDs=comp144754_c0_seq1.path1,comp171892_c0_seq1.path1;transcripts=comp171892_c0_seq1.mrna1,comp144754_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60689849	62634132	.	-	.	ID=comp171892_c0_seq1.mrna1;geneID=comp171892_c0_seq1.path1;Name=comp171892_c0_seq1;Dir=indeterminatecoverage=84.6;identity=94.2;matches=1053;mismatches=11;indels=54;unknowns=0;Target=comp171892_c0_seq1 758 615 .;locus=RLOC_00017772
Chr2	stalkie_big_nohaplotig	exon	60689849	60689897	26	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 1267 1255 .
Chr2	stalkie_big_nohaplotig	exon	60691729	60691737	100	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 1242 1234 .
Chr2	stalkie_big_nohaplotig	exon	60695576	60695585	100	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 1231 1222 .
Chr2	stalkie_big_nohaplotig	exon	60696468	60696473	100	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 1221 1216 .
Chr2	stalkie_big_nohaplotig	exon	60696494	60696536	67	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 1204 1168 .
Chr2	stalkie_big_nohaplotig	exon	60698001	60698019	70	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 1167 1144 .
Chr2	stalkie_big_nohaplotig	exon	60699877	60699881	100	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 1143 1139 .
Chr2	stalkie_big_nohaplotig	exon	60700175	60700187	100	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 1136 1124 .
Chr2	stalkie_big_nohaplotig	exon	60709090	60709098	100	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 1102 1094 .
Chr2	stalkie_big_nohaplotig	exon	60709114	60709122	100	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 1074 1066 .
Chr2	stalkie_big_nohaplotig	exon	60742254	60742263	100	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 1058 1049 .
Chr2	stalkie_big_nohaplotig	exon	60744032	60744038	100	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 1048 1042 .
Chr2	stalkie_big_nohaplotig	exon	60744044	60744051	100	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 1035 1028 .
Chr2	stalkie_big_nohaplotig	exon	60749684	60749688	100	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 1027 1023 .
Chr2	stalkie_big_nohaplotig	exon	60749699	60749702	100	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 987 984 .
Chr2	stalkie_big_nohaplotig	exon	60767451	60767463	100	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 933 921 .
Chr2	stalkie_big_nohaplotig	exon	60767491	60767499	100	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 901 893 .
Chr2	stalkie_big_nohaplotig	exon	60769410	60769417	100	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 892 885 .
Chr2	stalkie_big_nohaplotig	exon	60773330	60773340	100	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 880 870 .
Chr2	stalkie_big_nohaplotig	exon	60776681	60776693	100	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 865 853 .
Chr2	stalkie_big_nohaplotig	exon	60782819	60782820	50	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 852 851 .
Chr2	stalkie_big_nohaplotig	exon	60796216	60796224	22	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 850 849 .
Chr2	stalkie_big_nohaplotig	exon	62633297	62634132	100	-	.	Parent=comp171892_c0_seq1.mrna1;Target=comp171892_c0_seq1 837 2 .
Chr2	stalkie_big_nohaplotig	CDS	62633376	62633519	.	-	0	Parent=comp171892_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60767414	60768048	.	-	.	ID=comp144754_c0_seq1.mrna1;geneID=comp144754_c0_seq1.path1;Name=comp144754_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=629;mismatches=6;indels=0;unknowns=0;Target=comp144754_c0_seq1 635 1 .;CDS_Target=comp144754_c0_seq1 601 431 .;locus=RLOC_00017772
Chr2	stalkie_big_nohaplotig	exon	60767414	60768048	99	-	.	Parent=comp144754_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60767448	60767618	.	-	0	Parent=comp144754_c0_seq1.mrna1
Chr2	gffcl	locus	60744059	60749826	.	-	.	ID=RLOC_00017773;geneIDs=FBgn0034394.4.path1;transcripts=FBgn0034394.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60744059	60749826	.	-	.	ID=FBgn0034394.4.mrna1;geneID=FBgn0034394.4.path1;Name=FBgn0034394.4;Dir=sensecoverage=100.0;identity=99.6;matches=1405;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017773
Chr2	stalkie_big_nohaplotig	exon	60744059	60744229	100	-	.	Parent=FBgn0034394.4.mrna1;Target=FBgn0034394.4 1240 1410 +
Chr2	stalkie_big_nohaplotig	exon	60744290	60745363	99	-	.	Parent=FBgn0034394.4.mrna1;Target=FBgn0034394.4 166 1239 +
Chr2	stalkie_big_nohaplotig	exon	60745427	60745563	100	-	.	Parent=FBgn0034394.4.mrna1;Target=FBgn0034394.4 29 165 +
Chr2	stalkie_big_nohaplotig	exon	60749799	60749826	100	-	.	Parent=FBgn0034394.4.mrna1;Target=FBgn0034394.4 1 28 +
Chr2	stalkie_big_nohaplotig	CDS	60744059	60744229	.	-	0	Parent=FBgn0034394.4.mrna1;Target=FBgn0034394.4 1240 1410 +
Chr2	stalkie_big_nohaplotig	CDS	60744290	60745363	.	-	0	Parent=FBgn0034394.4.mrna1;Target=FBgn0034394.4 166 1239 +
Chr2	stalkie_big_nohaplotig	CDS	60745427	60745563	.	-	2	Parent=FBgn0034394.4.mrna1;Target=FBgn0034394.4 29 165 +
Chr2	stalkie_big_nohaplotig	CDS	60749799	60749826	.	-	0	Parent=FBgn0034394.4.mrna1;Target=FBgn0034394.4 1 28 +
Chr2	gffcl	locus	60745812	60747124	.	+	.	ID=RLOC_00017774;geneIDs=comp155869_c0_seq1.path1;transcripts=comp155869_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60745812	60747124	.	+	.	ID=comp155869_c0_seq1.mrna1;geneID=comp155869_c0_seq1.path1;Name=comp155869_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.1;matches=1176;mismatches=44;indels=4;unknowns=0;Target=comp155869_c0_seq1 1196 1086 .;locus=RLOC_00017774
Chr2	stalkie_big_nohaplotig	exon	60745812	60746647	95	+	.	Parent=comp155869_c0_seq1.mrna1;Target=comp155869_c0_seq1 832 1 .
Chr2	stalkie_big_nohaplotig	exon	60746737	60747124	98	+	.	Parent=comp155869_c0_seq1.mrna1;Target=comp155869_c0_seq1 1220 833 .
Chr2	stalkie_big_nohaplotig	CDS	60746990	60747100	.	+	0	Parent=comp155869_c0_seq1.mrna1
Chr2	gffcl	locus	60756642	60758457	.	-	.	ID=RLOC_00017776;geneIDs=FBgn0034394.2.path1;transcripts=FBgn0034394.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60756642	60758457	.	-	.	ID=FBgn0034394.2.mrna1;geneID=FBgn0034394.2.path1;Name=FBgn0034394.2;Dir=sensecoverage=100.0;identity=99.7;matches=1430;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017776
Chr2	stalkie_big_nohaplotig	exon	60756642	60756803	99	-	.	Parent=FBgn0034394.2.mrna1;Target=FBgn0034394.2 1273 1434 +
Chr2	stalkie_big_nohaplotig	exon	60757071	60758141	99	-	.	Parent=FBgn0034394.2.mrna1;Target=FBgn0034394.2 202 1272 +
Chr2	stalkie_big_nohaplotig	exon	60758196	60758332	100	-	.	Parent=FBgn0034394.2.mrna1;Target=FBgn0034394.2 65 201 +
Chr2	stalkie_big_nohaplotig	exon	60758394	60758457	98	-	.	Parent=FBgn0034394.2.mrna1;Target=FBgn0034394.2 1 64 +
Chr2	stalkie_big_nohaplotig	CDS	60756642	60756803	.	-	0	Parent=FBgn0034394.2.mrna1;Target=FBgn0034394.2 1273 1434 +
Chr2	stalkie_big_nohaplotig	CDS	60757071	60758141	.	-	0	Parent=FBgn0034394.2.mrna1;Target=FBgn0034394.2 202 1272 +
Chr2	stalkie_big_nohaplotig	CDS	60758196	60758332	.	-	2	Parent=FBgn0034394.2.mrna1;Target=FBgn0034394.2 65 201 +
Chr2	stalkie_big_nohaplotig	CDS	60758394	60758457	.	-	0	Parent=FBgn0034394.2.mrna1;Target=FBgn0034394.2 1 64 +
Chr2	gffcl	locus	60762213	60769852	.	-	.	ID=RLOC_00017777;geneIDs=FBgn0034394.3.path1;transcripts=FBgn0034394.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60762213	60769852	.	-	.	ID=FBgn0034394.3.mrna1;geneID=FBgn0034394.3.path1;Name=FBgn0034394.3;Dir=sensecoverage=100.0;identity=99.7;matches=1441;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017777
Chr2	stalkie_big_nohaplotig	exon	60762213	60762380	100	-	.	Parent=FBgn0034394.3.mrna1;Target=FBgn0034394.3 1279 1446 +
Chr2	stalkie_big_nohaplotig	exon	60762453	60763532	99	-	.	Parent=FBgn0034394.3.mrna1;Target=FBgn0034394.3 199 1278 +
Chr2	stalkie_big_nohaplotig	exon	60763597	60763733	99	-	.	Parent=FBgn0034394.3.mrna1;Target=FBgn0034394.3 62 198 +
Chr2	stalkie_big_nohaplotig	exon	60769792	60769852	100	-	.	Parent=FBgn0034394.3.mrna1;Target=FBgn0034394.3 1 61 +
Chr2	stalkie_big_nohaplotig	CDS	60762213	60762380	.	-	0	Parent=FBgn0034394.3.mrna1;Target=FBgn0034394.3 1279 1446 +
Chr2	stalkie_big_nohaplotig	CDS	60762453	60763532	.	-	0	Parent=FBgn0034394.3.mrna1;Target=FBgn0034394.3 199 1278 +
Chr2	stalkie_big_nohaplotig	CDS	60763597	60763733	.	-	2	Parent=FBgn0034394.3.mrna1;Target=FBgn0034394.3 62 198 +
Chr2	stalkie_big_nohaplotig	CDS	60769792	60769852	.	-	0	Parent=FBgn0034394.3.mrna1;Target=FBgn0034394.3 1 61 +
Chr2	gffcl	locus	60763825	60764863	.	+	.	ID=RLOC_00017778;geneIDs=comp135761_c0_seq1.path1;transcripts=comp135761_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60763825	60764863	.	+	.	ID=comp135761_c0_seq1.mrna1;geneID=comp135761_c0_seq1.path1;Name=comp135761_c0_seq1;Dir=indeterminatecoverage=96.5;identity=98.2;matches=1031;mismatches=8;indels=11;unknowns=0;Target=comp135761_c0_seq1 1072 23 .;CDS_Target=comp135761_c0_seq1 177 88 .;locus=RLOC_00017778
Chr2	stalkie_big_nohaplotig	exon	60763825	60764863	98	+	.	Parent=comp135761_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60763890	60763971	.	+	0	Parent=comp135761_c0_seq1.mrna1
Chr2	gffcl	locus	60764966	60766134	.	-	.	ID=RLOC_00017779;geneIDs=comp151968_c1_seq1.path1;transcripts=comp151968_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60764966	60766134	.	-	.	ID=comp151968_c1_seq1.mrna1;geneID=comp151968_c1_seq1.path1;Name=comp151968_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1164;mismatches=5;indels=0;unknowns=0;Target=comp151968_c1_seq1 1169 1 .;CDS_Target=comp151968_c1_seq1 141 28 .;locus=RLOC_00017779
Chr2	stalkie_big_nohaplotig	exon	60764966	60766134	99	-	.	Parent=comp151968_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60765994	60766107	.	-	0	Parent=comp151968_c1_seq1.mrna1
Chr2	gffcl	locus	60766539	60767043	.	-	.	ID=RLOC_00017780;geneIDs=comp88808_c0_seq1.path1;transcripts=comp88808_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60766539	60767043	.	-	.	ID=comp88808_c0_seq1.mrna1;geneID=comp88808_c0_seq1.path1;Name=comp88808_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=505;mismatches=0;indels=0;unknowns=0;Target=comp88808_c0_seq1 505 1 .;CDS_Target=comp88808_c0_seq1 337 224 .;locus=RLOC_00017780
Chr2	stalkie_big_nohaplotig	exon	60766539	60767043	100	-	.	Parent=comp88808_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60766707	60766820	.	-	0	Parent=comp88808_c0_seq1.mrna1
Chr2	gffcl	locus	60788593	60789249	.	-	.	ID=RLOC_00017781;geneIDs=comp148593_c0_seq1.path1;transcripts=comp148593_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60788593	60789249	.	-	.	ID=comp148593_c0_seq1.mrna1;geneID=comp148593_c0_seq1.path1;Name=comp148593_c0_seq1;Dir=indeterminatecoverage=98.1;identity=99.8;matches=656;mismatches=1;indels=0;unknowns=0;Target=comp148593_c0_seq1 657 1 .;CDS_Target=comp148593_c0_seq1 588 523 .;locus=RLOC_00017781
Chr2	stalkie_big_nohaplotig	exon	60788593	60789249	99	-	.	Parent=comp148593_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60788662	60788727	.	-	0	Parent=comp148593_c0_seq1.mrna1
Chr2	gffcl	locus	60804263	60809908	.	-	.	ID=RLOC_00017782;geneIDs=FBgn0034394.5.path1;transcripts=FBgn0034394.5.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60804263	60809908	.	-	.	ID=FBgn0034394.5.mrna1;geneID=FBgn0034394.5.path1;Name=FBgn0034394.5;Dir=sensecoverage=100.0;identity=98.8;matches=1512;mismatches=18;indels=0;unknowns=0;locus=RLOC_00017782
Chr2	stalkie_big_nohaplotig	exon	60804263	60804415	99	-	.	Parent=FBgn0034394.5.mrna1;Target=FBgn0034394.5 1378 1530 +
Chr2	stalkie_big_nohaplotig	exon	60804470	60805549	98	-	.	Parent=FBgn0034394.5.mrna1;Target=FBgn0034394.5 298 1377 +
Chr2	stalkie_big_nohaplotig	exon	60805613	60805752	97	-	.	Parent=FBgn0034394.5.mrna1;Target=FBgn0034394.5 158 297 +
Chr2	stalkie_big_nohaplotig	exon	60809752	60809908	100	-	.	Parent=FBgn0034394.5.mrna1;Target=FBgn0034394.5 1 157 +
Chr2	stalkie_big_nohaplotig	CDS	60804263	60804415	.	-	0	Parent=FBgn0034394.5.mrna1;Target=FBgn0034394.5 1378 1530 +
Chr2	stalkie_big_nohaplotig	CDS	60804470	60805549	.	-	0	Parent=FBgn0034394.5.mrna1;Target=FBgn0034394.5 298 1377 +
Chr2	stalkie_big_nohaplotig	CDS	60805613	60805752	.	-	2	Parent=FBgn0034394.5.mrna1;Target=FBgn0034394.5 158 297 +
Chr2	stalkie_big_nohaplotig	CDS	60809752	60809908	.	-	0	Parent=FBgn0034394.5.mrna1;Target=FBgn0034394.5 1 157 +
Chr2	gffcl	locus	60817446	60819119	.	-	.	ID=RLOC_00017783;geneIDs=FBgn0034785.1.path1;transcripts=FBgn0034785.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60817446	60819119	.	-	.	ID=FBgn0034785.1.mrna1;geneID=FBgn0034785.1.path1;Name=FBgn0034785.1;Dir=sensecoverage=100.0;identity=99.2;matches=1393;mismatches=8;indels=3;unknowns=0;locus=RLOC_00017783
Chr2	stalkie_big_nohaplotig	exon	60817446	60817619	97	-	.	Parent=FBgn0034785.1.mrna1;Target=FBgn0034785.1 1228 1404 +
Chr2	stalkie_big_nohaplotig	exon	60817677	60818338	99	-	.	Parent=FBgn0034785.1.mrna1;Target=FBgn0034785.1 566 1227 +
Chr2	stalkie_big_nohaplotig	exon	60818394	60818802	99	-	.	Parent=FBgn0034785.1.mrna1;Target=FBgn0034785.1 157 565 +
Chr2	stalkie_big_nohaplotig	exon	60818867	60819003	100	-	.	Parent=FBgn0034785.1.mrna1;Target=FBgn0034785.1 20 156 +
Chr2	stalkie_big_nohaplotig	exon	60819101	60819119	100	-	.	Parent=FBgn0034785.1.mrna1;Target=FBgn0034785.1 1 19 +
Chr2	stalkie_big_nohaplotig	CDS	60817446	60817619	.	-	0	Parent=FBgn0034785.1.mrna1;Target=FBgn0034785.1 1228 1404 +
Chr2	stalkie_big_nohaplotig	CDS	60817677	60818338	.	-	2	Parent=FBgn0034785.1.mrna1;Target=FBgn0034785.1 566 1227 +
Chr2	stalkie_big_nohaplotig	CDS	60818394	60818802	.	-	0	Parent=FBgn0034785.1.mrna1;Target=FBgn0034785.1 157 565 +
Chr2	stalkie_big_nohaplotig	CDS	60818867	60819003	.	-	2	Parent=FBgn0034785.1.mrna1;Target=FBgn0034785.1 20 156 +
Chr2	stalkie_big_nohaplotig	CDS	60819101	60819119	.	-	0	Parent=FBgn0034785.1.mrna1;Target=FBgn0034785.1 1 19 +
Chr2	gffcl	locus	60824377	60824744	.	+	.	ID=RLOC_00017784;geneIDs=Dv_FBgn0209645.1.path5;transcripts=Dv_FBgn0209645.1.mrna5
Chr2	stalkie_big_nohaplotig	mRNA	60824377	60824744	.	+	.	ID=Dv_FBgn0209645.1.mrna5;geneID=Dv_FBgn0209645.1.path5;Name=Dv_FBgn0209645.1;Dir=indeterminatecoverage=99.7;identity=98.6;matches=363;mismatches=5;indels=0;unknowns=0;Target=Dv_FBgn0209645.1 368 1 .;CDS_Target=Dv_FBgn0209645.1 366 1 .;locus=RLOC_00017784
Chr2	stalkie_big_nohaplotig	exon	60824377	60824744	98	+	.	Parent=Dv_FBgn0209645.1.mrna5
Chr2	stalkie_big_nohaplotig	CDS	60824377	60824742	.	+	0	Parent=Dv_FBgn0209645.1.mrna5
Chr2	gffcl	locus	60830506	60831658	.	-	.	ID=RLOC_00017785;geneIDs=comp163261_c0_seq1.path5;transcripts=comp163261_c0_seq1.mrna5
Chr2	stalkie_big_nohaplotig	mRNA	60830506	60831658	.	-	.	ID=comp163261_c0_seq1.mrna5;geneID=comp163261_c0_seq1.path5;Name=comp163261_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=1135;mismatches=18;indels=1;unknowns=0;Target=comp163261_c0_seq1 1154 1 .;CDS_Target=comp163261_c0_seq1 556 491 .;locus=RLOC_00017785
Chr2	stalkie_big_nohaplotig	exon	60830506	60831658	98	-	.	Parent=comp163261_c0_seq1.mrna5
Chr2	stalkie_big_nohaplotig	CDS	60831104	60831168	.	-	0	Parent=comp163261_c0_seq1.mrna5
Chr2	gffcl	locus	60838871	60848443	.	-	.	ID=RLOC_00017786;geneIDs=FBgn0034784.1.path1;transcripts=FBgn0034784.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60838871	60848443	.	-	.	ID=FBgn0034784.1.mrna1;geneID=FBgn0034784.1.path1;Name=FBgn0034784.1;Dir=sensecoverage=100.0;identity=100.0;matches=1575;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017786
Chr2	stalkie_big_nohaplotig	exon	60838871	60839179	100	-	.	Parent=FBgn0034784.1.mrna1;Target=FBgn0034784.1 1267 1575 +
Chr2	stalkie_big_nohaplotig	exon	60839245	60840318	100	-	.	Parent=FBgn0034784.1.mrna1;Target=FBgn0034784.1 193 1266 +
Chr2	stalkie_big_nohaplotig	exon	60840406	60840542	100	-	.	Parent=FBgn0034784.1.mrna1;Target=FBgn0034784.1 56 192 +
Chr2	stalkie_big_nohaplotig	exon	60848389	60848443	100	-	.	Parent=FBgn0034784.1.mrna1;Target=FBgn0034784.1 1 55 +
Chr2	stalkie_big_nohaplotig	CDS	60838871	60839179	.	-	0	Parent=FBgn0034784.1.mrna1;Target=FBgn0034784.1 1267 1575 +
Chr2	stalkie_big_nohaplotig	CDS	60839245	60840318	.	-	0	Parent=FBgn0034784.1.mrna1;Target=FBgn0034784.1 193 1266 +
Chr2	stalkie_big_nohaplotig	CDS	60840406	60840542	.	-	2	Parent=FBgn0034784.1.mrna1;Target=FBgn0034784.1 56 192 +
Chr2	stalkie_big_nohaplotig	CDS	60848389	60848443	.	-	0	Parent=FBgn0034784.1.mrna1;Target=FBgn0034784.1 1 55 +
Chr2	gffcl	locus	60857391	60857815	.	+	.	ID=RLOC_00017787;geneIDs=comp134773_c0_seq1.path1;transcripts=comp134773_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60857391	60857815	.	+	.	ID=comp134773_c0_seq1.mrna1;geneID=comp134773_c0_seq1.path1;Name=comp134773_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=420;mismatches=5;indels=0;unknowns=0;Target=comp134773_c0_seq1 425 1 .;CDS_Target=comp134773_c0_seq1 357 190 .;locus=RLOC_00017787
Chr2	stalkie_big_nohaplotig	exon	60857391	60857815	98	+	.	Parent=comp134773_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	60857580	60857747	.	+	0	Parent=comp134773_c0_seq1.mrna1
Chr2	gffcl	locus	60858067	60861991	.	-	.	ID=RLOC_00017788;geneIDs=FBgn0050272.1.path1;transcripts=FBgn0050272.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60858067	60861991	.	-	.	ID=FBgn0050272.1.mrna1;geneID=FBgn0050272.1.path1;Name=FBgn0050272.1;Dir=sensecoverage=100.0;identity=100.0;matches=1449;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017788
Chr2	stalkie_big_nohaplotig	exon	60858067	60858249	100	-	.	Parent=FBgn0050272.1.mrna1;Target=FBgn0050272.1 1267 1449 +
Chr2	stalkie_big_nohaplotig	exon	60858309	60859394	100	-	.	Parent=FBgn0050272.1.mrna1;Target=FBgn0050272.1 181 1266 +
Chr2	stalkie_big_nohaplotig	exon	60859485	60859621	100	-	.	Parent=FBgn0050272.1.mrna1;Target=FBgn0050272.1 44 180 +
Chr2	stalkie_big_nohaplotig	exon	60861949	60861991	100	-	.	Parent=FBgn0050272.1.mrna1;Target=FBgn0050272.1 1 43 +
Chr2	stalkie_big_nohaplotig	CDS	60858067	60858249	.	-	0	Parent=FBgn0050272.1.mrna1;Target=FBgn0050272.1 1267 1449 +
Chr2	stalkie_big_nohaplotig	CDS	60858309	60859394	.	-	0	Parent=FBgn0050272.1.mrna1;Target=FBgn0050272.1 181 1266 +
Chr2	stalkie_big_nohaplotig	CDS	60859485	60859621	.	-	2	Parent=FBgn0050272.1.mrna1;Target=FBgn0050272.1 44 180 +
Chr2	stalkie_big_nohaplotig	CDS	60861949	60861991	.	-	0	Parent=FBgn0050272.1.mrna1;Target=FBgn0050272.1 1 43 +
Chr2	gffcl	locus	60962052	60975082	.	-	.	ID=RLOC_00017791;geneIDs=FBgn0086408.1.path1;transcripts=FBgn0086408.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60962052	60975082	.	-	.	ID=FBgn0086408.1.mrna1;geneID=FBgn0086408.1.path1;Name=FBgn0086408.1;Dir=sensecoverage=94.4;identity=99.3;matches=3547;mismatches=25;indels=0;unknowns=0;locus=RLOC_00017791
Chr2	stalkie_big_nohaplotig	exon	60962052	60962124	98	-	.	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 3710 3782 +
Chr2	stalkie_big_nohaplotig	exon	60963196	60963667	99	-	.	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 3238 3709 +
Chr2	stalkie_big_nohaplotig	exon	60963720	60963991	99	-	.	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 2966 3237 +
Chr2	stalkie_big_nohaplotig	exon	60964058	60964432	98	-	.	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 2591 2965 +
Chr2	stalkie_big_nohaplotig	exon	60964496	60964790	98	-	.	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 2296 2590 +
Chr2	stalkie_big_nohaplotig	exon	60965259	60965417	99	-	.	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 2137 2295 +
Chr2	stalkie_big_nohaplotig	exon	60965482	60965731	99	-	.	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 1887 2136 +
Chr2	stalkie_big_nohaplotig	exon	60965794	60965922	98	-	.	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 1758 1886 +
Chr2	stalkie_big_nohaplotig	exon	60965978	60966140	98	-	.	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 1595 1757 +
Chr2	stalkie_big_nohaplotig	exon	60966197	60967106	99	-	.	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 685 1594 +
Chr2	stalkie_big_nohaplotig	exon	60968668	60968858	100	-	.	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 494 684 +
Chr2	stalkie_big_nohaplotig	exon	60971322	60971531	100	-	.	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 284 493 +
Chr2	stalkie_big_nohaplotig	exon	60975010	60975082	98	-	.	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 211 283 +
Chr2	stalkie_big_nohaplotig	CDS	60962054	60962124	.	-	2	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 3710 3780 +
Chr2	stalkie_big_nohaplotig	CDS	60963196	60963667	.	-	0	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 3238 3709 +
Chr2	stalkie_big_nohaplotig	CDS	60963720	60963991	.	-	2	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 2966 3237 +
Chr2	stalkie_big_nohaplotig	CDS	60964058	60964432	.	-	2	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 2591 2965 +
Chr2	stalkie_big_nohaplotig	CDS	60964496	60964790	.	-	0	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 2296 2590 +
Chr2	stalkie_big_nohaplotig	CDS	60965259	60965417	.	-	0	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 2137 2295 +
Chr2	stalkie_big_nohaplotig	CDS	60965482	60965731	.	-	1	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 1887 2136 +
Chr2	stalkie_big_nohaplotig	CDS	60965794	60965922	.	-	1	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 1758 1886 +
Chr2	stalkie_big_nohaplotig	CDS	60965978	60966140	.	-	2	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 1595 1757 +
Chr2	stalkie_big_nohaplotig	CDS	60966197	60967106	.	-	0	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 685 1594 +
Chr2	stalkie_big_nohaplotig	CDS	60968668	60968858	.	-	2	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 494 684 +
Chr2	stalkie_big_nohaplotig	CDS	60971322	60971531	.	-	2	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 284 493 +
Chr2	stalkie_big_nohaplotig	CDS	60975010	60975082	.	-	0	Parent=FBgn0086408.1.mrna1;Target=FBgn0086408.1 211 283 +
Chr2	gffcl	locus	60993759	60999746	.	-	.	ID=RLOC_00017792;geneIDs=comp117711_c0_seq1.path1;transcripts=comp117711_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	60993759	60999746	.	-	.	ID=comp117711_c0_seq1.mrna1;geneID=comp117711_c0_seq1.path1;Name=comp117711_c0_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=639;mismatches=3;indels=3;unknowns=0;Target=comp117711_c0_seq1 437 643 .;locus=RLOC_00017792
Chr2	stalkie_big_nohaplotig	exon	60993759	60993875	97	-	.	Parent=comp117711_c0_seq1.mrna1;Target=comp117711_c0_seq1 1 119 -
Chr2	stalkie_big_nohaplotig	exon	60999222	60999746	99	-	.	Parent=comp117711_c0_seq1.mrna1;Target=comp117711_c0_seq1 120 645 -
Chr2	stalkie_big_nohaplotig	CDS	60999539	60999744	.	-	0	Parent=comp117711_c0_seq1.mrna1
Chr2	gffcl	locus	61006385	61031643	.	+	.	ID=RLOC_00017793;geneIDs=FBgn0000405.1.path1,FBgn0000405.2.path1,comp158303_c0_seq1.path1;transcripts=FBgn0000405.1.mrna1,comp158303_c0_seq1.mrna1,FBgn0000405.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61006385	61030997	.	+	.	ID=FBgn0000405.1.mrna1;geneID=FBgn0000405.1.path1;Name=FBgn0000405.1;Dir=sensecoverage=99.3;identity=92.9;matches=1658;mismatches=127;indels=0;unknowns=0;locus=RLOC_00017793
Chr2	stalkie_big_nohaplotig	exon	61006385	61006476	98	+	.	Parent=FBgn0000405.1.mrna1;Target=FBgn0000405.1 1 92 +
Chr2	stalkie_big_nohaplotig	exon	61006535	61006658	97	+	.	Parent=FBgn0000405.1.mrna1;Target=FBgn0000405.1 93 216 +
Chr2	stalkie_big_nohaplotig	exon	61016301	61016412	98	+	.	Parent=FBgn0000405.1.mrna1;Target=FBgn0000405.1 217 328 +
Chr2	stalkie_big_nohaplotig	exon	61027087	61027108	100	+	.	Parent=FBgn0000405.1.mrna1;Target=FBgn0000405.1 329 350 +
Chr2	stalkie_big_nohaplotig	exon	61027238	61027494	100	+	.	Parent=FBgn0000405.1.mrna1;Target=FBgn0000405.1 351 607 +
Chr2	stalkie_big_nohaplotig	exon	61027550	61028451	94	+	.	Parent=FBgn0000405.1.mrna1;Target=FBgn0000405.1 608 1509 +
Chr2	stalkie_big_nohaplotig	exon	61030722	61030997	75	+	.	Parent=FBgn0000405.1.mrna1;Target=FBgn0000405.1 1510 1785 +
Chr2	stalkie_big_nohaplotig	CDS	61006385	61006476	.	+	0	Parent=FBgn0000405.1.mrna1;Target=FBgn0000405.1 1 92 +
Chr2	stalkie_big_nohaplotig	CDS	61006535	61006658	.	+	1	Parent=FBgn0000405.1.mrna1;Target=FBgn0000405.1 93 216 +
Chr2	stalkie_big_nohaplotig	CDS	61016301	61016412	.	+	0	Parent=FBgn0000405.1.mrna1;Target=FBgn0000405.1 217 328 +
Chr2	stalkie_big_nohaplotig	CDS	61027087	61027108	.	+	2	Parent=FBgn0000405.1.mrna1;Target=FBgn0000405.1 329 350 +
Chr2	stalkie_big_nohaplotig	CDS	61027238	61027494	.	+	1	Parent=FBgn0000405.1.mrna1;Target=FBgn0000405.1 351 607 +
Chr2	stalkie_big_nohaplotig	CDS	61027550	61028451	.	+	2	Parent=FBgn0000405.1.mrna1;Target=FBgn0000405.1 608 1509 +
Chr2	stalkie_big_nohaplotig	CDS	61030722	61030997	.	+	0	Parent=FBgn0000405.1.mrna1;Target=FBgn0000405.1 1510 1785 +
Chr2	stalkie_big_nohaplotig	mRNA	61015657	61031643	.	+	.	ID=comp158303_c0_seq1.mrna1;geneID=comp158303_c0_seq1.path1;Name=comp158303_c0_seq1;Dir=sensecoverage=99.7;identity=99.3;matches=2638;mismatches=18;indels=0;unknowns=0;locus=RLOC_00017793
Chr2	stalkie_big_nohaplotig	exon	61015657	61016097	96	+	.	Parent=comp158303_c0_seq1.mrna1;Target=comp158303_c0_seq1 8 448 +
Chr2	stalkie_big_nohaplotig	exon	61016301	61016412	98	+	.	Parent=comp158303_c0_seq1.mrna1;Target=comp158303_c0_seq1 449 560 +
Chr2	stalkie_big_nohaplotig	exon	61027087	61027108	100	+	.	Parent=comp158303_c0_seq1.mrna1;Target=comp158303_c0_seq1 561 582 +
Chr2	stalkie_big_nohaplotig	exon	61027238	61027494	100	+	.	Parent=comp158303_c0_seq1.mrna1;Target=comp158303_c0_seq1 583 839 +
Chr2	stalkie_big_nohaplotig	exon	61027550	61028451	100	+	.	Parent=comp158303_c0_seq1.mrna1;Target=comp158303_c0_seq1 840 1741 +
Chr2	stalkie_big_nohaplotig	exon	61030722	61031643	99	+	.	Parent=comp158303_c0_seq1.mrna1;Target=comp158303_c0_seq1 1742 2663 +
Chr2	stalkie_big_nohaplotig	CDS	61016056	61016097	.	+	0	Parent=comp158303_c0_seq1.mrna1;Target=comp158303_c0_seq1 407 448 +
Chr2	stalkie_big_nohaplotig	CDS	61016301	61016412	.	+	0	Parent=comp158303_c0_seq1.mrna1;Target=comp158303_c0_seq1 449 560 +
Chr2	stalkie_big_nohaplotig	CDS	61027087	61027108	.	+	2	Parent=comp158303_c0_seq1.mrna1;Target=comp158303_c0_seq1 561 582 +
Chr2	stalkie_big_nohaplotig	CDS	61027238	61027494	.	+	1	Parent=comp158303_c0_seq1.mrna1;Target=comp158303_c0_seq1 583 839 +
Chr2	stalkie_big_nohaplotig	CDS	61027550	61028451	.	+	2	Parent=comp158303_c0_seq1.mrna1;Target=comp158303_c0_seq1 840 1741 +
Chr2	stalkie_big_nohaplotig	CDS	61030722	61031009	.	+	0	Parent=comp158303_c0_seq1.mrna1;Target=comp158303_c0_seq1 1742 2029 +
Chr2	stalkie_big_nohaplotig	mRNA	61016041	61018038	.	+	.	ID=FBgn0000405.2.mrna1;geneID=FBgn0000405.2.path1;Name=FBgn0000405.2;Dir=sensecoverage=100.0;identity=93.9;matches=1515;mismatches=93;indels=6;unknowns=0;locus=RLOC_00017793
Chr2	stalkie_big_nohaplotig	exon	61016041	61016097	100	+	.	Parent=FBgn0000405.2.mrna1;Target=FBgn0000405.2 1 57 +
Chr2	stalkie_big_nohaplotig	exon	61016301	61016434	98	+	.	Parent=FBgn0000405.2.mrna1;Target=FBgn0000405.2 58 191 +
Chr2	stalkie_big_nohaplotig	exon	61016510	61016754	100	+	.	Parent=FBgn0000405.2.mrna1;Target=FBgn0000405.2 192 436 +
Chr2	stalkie_big_nohaplotig	exon	61016808	61017697	89	+	.	Parent=FBgn0000405.2.mrna1;Target=FBgn0000405.2 437 1320 +
Chr2	stalkie_big_nohaplotig	exon	61017751	61018038	98	+	.	Parent=FBgn0000405.2.mrna1;Target=FBgn0000405.2 1321 1608 +
Chr2	stalkie_big_nohaplotig	CDS	61016041	61016097	.	+	0	Parent=FBgn0000405.2.mrna1;Target=FBgn0000405.2 1 57 +
Chr2	stalkie_big_nohaplotig	CDS	61016301	61016434	.	+	0	Parent=FBgn0000405.2.mrna1;Target=FBgn0000405.2 58 191 +
Chr2	stalkie_big_nohaplotig	CDS	61016510	61016754	.	+	1	Parent=FBgn0000405.2.mrna1;Target=FBgn0000405.2 192 436 +
Chr2	stalkie_big_nohaplotig	CDS	61016808	61017697	.	+	2	Parent=FBgn0000405.2.mrna1;Target=FBgn0000405.2 437 1320 +
Chr2	stalkie_big_nohaplotig	CDS	61017751	61018038	.	+	0	Parent=FBgn0000405.2.mrna1;Target=FBgn0000405.2 1321 1608 +
Chr2	gffcl	locus	61008542	61420090	.	+	.	ID=RLOC_00017794;geneIDs=comp163590_c0_seq1.path1;transcripts=comp163590_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61008542	61420090	.	+	.	ID=comp163590_c0_seq1.mrna1;geneID=comp163590_c0_seq1.path1;Name=comp163590_c0_seq1;Dir=indeterminatecoverage=94.4;identity=96.8;matches=1014;mismatches=26;indels=7;unknowns=0;Target=comp163590_c0_seq1 965 801 .;locus=RLOC_00017794
Chr2	stalkie_big_nohaplotig	exon	61008542	61008602	100	+	.	Parent=comp163590_c0_seq1.mrna1;Target=comp163590_c0_seq1 61 1 .
Chr2	stalkie_big_nohaplotig	exon	61009893	61010257	99	+	.	Parent=comp163590_c0_seq1.mrna1;Target=comp163590_c0_seq1 426 62 .
Chr2	stalkie_big_nohaplotig	exon	61029280	61029283	100	+	.	Parent=comp163590_c0_seq1.mrna1;Target=comp163590_c0_seq1 430 427 .
Chr2	stalkie_big_nohaplotig	exon	61037365	61037367	100	+	.	Parent=comp163590_c0_seq1.mrna1;Target=comp163590_c0_seq1 433 431 .
Chr2	stalkie_big_nohaplotig	exon	61043240	61043250	100	+	.	Parent=comp163590_c0_seq1.mrna1;Target=comp163590_c0_seq1 444 434 .
Chr2	stalkie_big_nohaplotig	exon	61412511	61412519	100	+	.	Parent=comp163590_c0_seq1.mrna1;Target=comp163590_c0_seq1 561 553 .
Chr2	stalkie_big_nohaplotig	exon	61414927	61414931	100	+	.	Parent=comp163590_c0_seq1.mrna1;Target=comp163590_c0_seq1 566 562 .
Chr2	stalkie_big_nohaplotig	exon	61418628	61418641	100	+	.	Parent=comp163590_c0_seq1.mrna1;Target=comp163590_c0_seq1 580 567 .
Chr2	stalkie_big_nohaplotig	exon	61418727	61419218	95	+	.	Parent=comp163590_c0_seq1.mrna1;Target=comp163590_c0_seq1 1079 581 .
Chr2	stalkie_big_nohaplotig	exon	61420016	61420090	88	+	.	Parent=comp163590_c0_seq1.mrna1;Target=comp163590_c0_seq1 1154 1080 .
Chr2	stalkie_big_nohaplotig	CDS	61418947	61419104	.	+	0	Parent=comp163590_c0_seq1.mrna1
Chr2	gffcl	locus	61042235	61044906	.	-	.	ID=RLOC_00017795;geneIDs=FBgn0011211.1.path1;transcripts=FBgn0011211.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61042235	61044906	.	-	.	ID=FBgn0011211.1.mrna1;geneID=FBgn0011211.1.path1;Name=FBgn0011211.1;Dir=sensecoverage=100.0;identity=99.9;matches=1661;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017795
Chr2	stalkie_big_nohaplotig	exon	61042235	61042441	100	-	.	Parent=FBgn0011211.1.mrna1;Target=FBgn0011211.1 1456 1662 +
Chr2	stalkie_big_nohaplotig	exon	61042507	61043308	99	-	.	Parent=FBgn0011211.1.mrna1;Target=FBgn0011211.1 654 1455 +
Chr2	stalkie_big_nohaplotig	exon	61043371	61043951	100	-	.	Parent=FBgn0011211.1.mrna1;Target=FBgn0011211.1 73 653 +
Chr2	stalkie_big_nohaplotig	exon	61044835	61044906	100	-	.	Parent=FBgn0011211.1.mrna1;Target=FBgn0011211.1 1 72 +
Chr2	stalkie_big_nohaplotig	CDS	61042235	61042441	.	-	0	Parent=FBgn0011211.1.mrna1;Target=FBgn0011211.1 1456 1662 +
Chr2	stalkie_big_nohaplotig	CDS	61042507	61043308	.	-	1	Parent=FBgn0011211.1.mrna1;Target=FBgn0011211.1 654 1455 +
Chr2	stalkie_big_nohaplotig	CDS	61043371	61043951	.	-	0	Parent=FBgn0011211.1.mrna1;Target=FBgn0011211.1 73 653 +
Chr2	stalkie_big_nohaplotig	CDS	61044835	61044906	.	-	0	Parent=FBgn0011211.1.mrna1;Target=FBgn0011211.1 1 72 +
Chr2	gffcl	locus	61144088	61144624	.	+	.	ID=RLOC_00017797;geneIDs=Dp_FBgn0249056.3.path2;transcripts=Dp_FBgn0249056.3.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	61144088	61144624	.	+	.	ID=Dp_FBgn0249056.3.mrna2;geneID=Dp_FBgn0249056.3.path2;Name=Dp_FBgn0249056.3;Dir=indeterminatecoverage=100.0;identity=98.7;matches=530;mismatches=7;indels=0;unknowns=0;Target=Dp_FBgn0249056.3 537 1 .;locus=RLOC_00017797
Chr2	stalkie_big_nohaplotig	exon	61144088	61144624	98	+	.	Parent=Dp_FBgn0249056.3.mrna2
Chr2	stalkie_big_nohaplotig	CDS	61144088	61144624	.	+	0	Parent=Dp_FBgn0249056.3.mrna2
Chr2	gffcl	locus	61158461	61159247	.	-	.	ID=RLOC_00017798;geneIDs=comp118175_c0_seq1.path1;transcripts=comp118175_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61158461	61159247	.	-	.	ID=comp118175_c0_seq1.mrna1;geneID=comp118175_c0_seq1.path1;Name=comp118175_c0_seq1;Dir=indeterminatecoverage=99.4;identity=95.7;matches=780;mismatches=7;indels=28;unknowns=0;Target=comp118175_c0_seq1 820 6 .;CDS_Target=comp118175_c0_seq1 818 411 .;locus=RLOC_00017798
Chr2	stalkie_big_nohaplotig	exon	61158461	61159247	95	-	.	Parent=comp118175_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	61158463	61158870	.	-	0	Parent=comp118175_c0_seq1.mrna1
Chr2	gffcl	locus	61179848	61506297	.	+	.	ID=RLOC_00017799;geneIDs=FBgn0028371.1.path1,comp135535_c0_seq1.path1;transcripts=FBgn0028371.1.mrna1,comp135535_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61179848	61506297	.	+	.	ID=FBgn0028371.1.mrna1;geneID=FBgn0028371.1.path1;Name=FBgn0028371.1;Dir=sensecoverage=96.5;identity=99.7;matches=8267;mismatches=22;indels=0;unknowns=0;locus=RLOC_00017799
Chr2	stalkie_big_nohaplotig	exon	61179848	61180498	100	+	.	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 304 954 +
Chr2	stalkie_big_nohaplotig	exon	61180571	61180876	99	+	.	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 955 1260 +
Chr2	stalkie_big_nohaplotig	exon	61181383	61182387	99	+	.	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 1261 2265 +
Chr2	stalkie_big_nohaplotig	exon	61183014	61183208	98	+	.	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 2266 2460 +
Chr2	stalkie_big_nohaplotig	exon	61183267	61183712	100	+	.	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 2461 2906 +
Chr2	stalkie_big_nohaplotig	exon	61183770	61184197	100	+	.	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 2907 3334 +
Chr2	stalkie_big_nohaplotig	exon	61497378	61498389	100	+	.	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 3335 4346 +
Chr2	stalkie_big_nohaplotig	exon	61498461	61498681	100	+	.	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 4347 4567 +
Chr2	stalkie_big_nohaplotig	exon	61501858	61502006	99	+	.	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 4568 4716 +
Chr2	stalkie_big_nohaplotig	exon	61502103	61504176	99	+	.	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 4717 6790 +
Chr2	stalkie_big_nohaplotig	exon	61504240	61504368	99	+	.	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 6791 6919 +
Chr2	stalkie_big_nohaplotig	exon	61504439	61504800	99	+	.	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 6920 7281 +
Chr2	stalkie_big_nohaplotig	exon	61504857	61505858	100	+	.	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 7282 8283 +
Chr2	stalkie_big_nohaplotig	exon	61505924	61506103	99	+	.	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 8284 8463 +
Chr2	stalkie_big_nohaplotig	exon	61506169	61506297	99	+	.	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 8464 8592 +
Chr2	stalkie_big_nohaplotig	CDS	61179848	61180498	.	+	0	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 304 954 +
Chr2	stalkie_big_nohaplotig	CDS	61180571	61180876	.	+	0	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 955 1260 +
Chr2	stalkie_big_nohaplotig	CDS	61181383	61182387	.	+	0	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 1261 2265 +
Chr2	stalkie_big_nohaplotig	CDS	61183014	61183208	.	+	0	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 2266 2460 +
Chr2	stalkie_big_nohaplotig	CDS	61183267	61183712	.	+	0	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 2461 2906 +
Chr2	stalkie_big_nohaplotig	CDS	61183770	61184197	.	+	1	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 2907 3334 +
Chr2	stalkie_big_nohaplotig	CDS	61497378	61498389	.	+	2	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 3335 4346 +
Chr2	stalkie_big_nohaplotig	CDS	61498461	61498681	.	+	1	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 4347 4567 +
Chr2	stalkie_big_nohaplotig	CDS	61501858	61502006	.	+	2	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 4568 4716 +
Chr2	stalkie_big_nohaplotig	CDS	61502103	61504176	.	+	0	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 4717 6790 +
Chr2	stalkie_big_nohaplotig	CDS	61504240	61504368	.	+	2	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 6791 6919 +
Chr2	stalkie_big_nohaplotig	CDS	61504439	61504800	.	+	2	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 6920 7281 +
Chr2	stalkie_big_nohaplotig	CDS	61504857	61505858	.	+	0	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 7282 8283 +
Chr2	stalkie_big_nohaplotig	CDS	61505924	61506103	.	+	0	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 8284 8463 +
Chr2	stalkie_big_nohaplotig	CDS	61506169	61506297	.	+	0	Parent=FBgn0028371.1.mrna1;Target=FBgn0028371.1 8464 8592 +
Chr2	stalkie_big_nohaplotig	mRNA	61498644	61501038	.	+	.	ID=comp135535_c0_seq1.mrna1;geneID=comp135535_c0_seq1.path1;Name=comp135535_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=426;mismatches=1;indels=2;unknowns=0;Target=comp135535_c0_seq1 83 133 +;locus=RLOC_00017799
Chr2	stalkie_big_nohaplotig	exon	61498644	61498681	97	+	.	Parent=comp135535_c0_seq1.mrna1;Target=comp135535_c0_seq1 1 38 +
Chr2	stalkie_big_nohaplotig	exon	61500648	61501038	99	+	.	Parent=comp135535_c0_seq1.mrna1;Target=comp135535_c0_seq1 39 427 +
Chr2	stalkie_big_nohaplotig	CDS	61500692	61500744	.	+	0	Parent=comp135535_c0_seq1.mrna1
Chr2	gffcl	locus	61182469	61182980	.	+	.	ID=RLOC_00017800;geneIDs=comp150374_c0_seq1.path1;transcripts=comp150374_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61182469	61182980	.	+	.	ID=comp150374_c0_seq1.mrna1;geneID=comp150374_c0_seq1.path1;Name=comp150374_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=511;mismatches=1;indels=0;unknowns=0;Target=comp150374_c0_seq1 512 1 .;CDS_Target=comp150374_c0_seq1 131 3 .;locus=RLOC_00017800
Chr2	stalkie_big_nohaplotig	exon	61182469	61182980	99	+	.	Parent=comp150374_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	61182471	61182599	.	+	0	Parent=comp150374_c0_seq1.mrna1
Chr2	gffcl	locus	61191202	61192314	.	-	.	ID=RLOC_00017801;geneIDs=Dp_FBgn0249247.8.path2;transcripts=Dp_FBgn0249247.8.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	61191202	61192314	.	-	.	ID=Dp_FBgn0249247.8.mrna2;geneID=Dp_FBgn0249247.8.path2;Name=Dp_FBgn0249247.8;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1110;mismatches=3;indels=0;unknowns=0;Target=Dp_FBgn0249247.8 1113 1 .;locus=RLOC_00017801
Chr2	stalkie_big_nohaplotig	exon	61191202	61192314	99	-	.	Parent=Dp_FBgn0249247.8.mrna2
Chr2	stalkie_big_nohaplotig	CDS	61191202	61192314	.	-	0	Parent=Dp_FBgn0249247.8.mrna2
Chr2	gffcl	locus	61194433	61194969	.	-	.	ID=RLOC_00017802;geneIDs=Dp_FBgn0249056.3.path3;transcripts=Dp_FBgn0249056.3.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	61194433	61194969	.	-	.	ID=Dp_FBgn0249056.3.mrna3;geneID=Dp_FBgn0249056.3.path3;Name=Dp_FBgn0249056.3;Dir=indeterminatecoverage=100.0;identity=98.0;matches=526;mismatches=11;indels=0;unknowns=0;Target=Dp_FBgn0249056.3 537 1 .;locus=RLOC_00017802
Chr2	stalkie_big_nohaplotig	exon	61194433	61194969	97	-	.	Parent=Dp_FBgn0249056.3.mrna3
Chr2	stalkie_big_nohaplotig	CDS	61194433	61194969	.	-	0	Parent=Dp_FBgn0249056.3.mrna3
Chr2	gffcl	locus	61210469	61211350	.	-	.	ID=RLOC_00017803;geneIDs=comp142953_c0_seq1.path1;transcripts=comp142953_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61210469	61211350	.	-	.	ID=comp142953_c0_seq1.mrna1;geneID=comp142953_c0_seq1.path1;Name=comp142953_c0_seq1;Dir=indeterminatecoverage=98.0;identity=98.8;matches=879;mismatches=3;indels=8;unknowns=0;Target=comp142953_c0_seq1 899 10 .;CDS_Target=comp142953_c0_seq1 566 480 .;locus=RLOC_00017803
Chr2	stalkie_big_nohaplotig	exon	61210469	61211350	98	-	.	Parent=comp142953_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	61210802	61210887	.	-	0	Parent=comp142953_c0_seq1.mrna1
Chr2	gffcl	locus	61212896	61213466	.	+	.	ID=RLOC_00017804;geneIDs=comp151288_c0_seq1.path1;transcripts=comp151288_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61212896	61213466	.	+	.	ID=comp151288_c0_seq1.mrna1;geneID=comp151288_c0_seq1.path1;Name=comp151288_c0_seq1;Dir=indeterminatecoverage=84.2;identity=92.4;matches=544;mismatches=24;indels=21;unknowns=0;Target=comp151288_c0_seq1 586 1 .;CDS_Target=comp151288_c0_seq1 205 2 .;locus=RLOC_00017804
Chr2	stalkie_big_nohaplotig	exon	61212896	61213466	92	+	.	Parent=comp151288_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	61212897	61213100	.	+	0	Parent=comp151288_c0_seq1.mrna1
Chr2	gffcl	locus	61214161	61214522	.	+	.	ID=RLOC_00017805;geneIDs=comp151665_c0_seq1.path1;transcripts=comp151665_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61214161	61214522	.	+	.	ID=comp151665_c0_seq1.mrna1;geneID=comp151665_c0_seq1.path1;Name=comp151665_c0_seq1;Dir=indeterminatecoverage=95.3;identity=98.1;matches=355;mismatches=7;indels=0;unknowns=0;Target=comp151665_c0_seq1 380 19 .;CDS_Target=comp151665_c0_seq1 124 20 .;locus=RLOC_00017805
Chr2	stalkie_big_nohaplotig	exon	61214161	61214522	98	+	.	Parent=comp151665_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	61214162	61214266	.	+	0	Parent=comp151665_c0_seq1.mrna1
Chr2	gffcl	locus	61278830	61280781	.	+	.	ID=RLOC_00017806;geneIDs=AAEL017378.1.path5;transcripts=AAEL017378.1.mrna5
Chr2	stalkie_big_nohaplotig	mRNA	61278830	61280781	.	+	.	ID=AAEL017378.1.mrna5;geneID=AAEL017378.1.path5;Name=AAEL017378.1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1930;mismatches=10;indels=13;unknowns=0;Target=AAEL017378.1 1941 1 .;CDS_Target=AAEL017378.1 1941 88 .;locus=RLOC_00017806
Chr2	stalkie_big_nohaplotig	exon	61278830	61280781	98	+	.	Parent=AAEL017378.1.mrna5
Chr2	stalkie_big_nohaplotig	CDS	61278916	61280781	.	+	0	Parent=AAEL017378.1.mrna5
Chr2	gffcl	locus	61317586	61318193	.	+	.	ID=RLOC_00017807;geneIDs=comp948620_c0_seq1.path1;transcripts=comp948620_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61317586	61318193	.	+	.	ID=comp948620_c0_seq1.mrna1;geneID=comp948620_c0_seq1.path1;Name=comp948620_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.7;matches=600;mismatches=8;indels=0;unknowns=0;Target=comp948620_c0_seq1 608 1 .;CDS_Target=comp948620_c0_seq1 480 259 .;locus=RLOC_00017807
Chr2	stalkie_big_nohaplotig	exon	61317586	61318193	98	+	.	Parent=comp948620_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	61317844	61318065	.	+	0	Parent=comp948620_c0_seq1.mrna1
Chr2	gffcl	locus	61325016	61325861	.	+	.	ID=RLOC_00017808;geneIDs=FBgn0051155.2.path1;transcripts=FBgn0051155.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61325016	61325861	.	+	.	ID=FBgn0051155.2.mrna1;geneID=FBgn0051155.2.path1;Name=FBgn0051155.2;Dir=sensecoverage=100.0;identity=99.5;matches=549;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017808
Chr2	stalkie_big_nohaplotig	exon	61325016	61325036	100	+	.	Parent=FBgn0051155.2.mrna1;Target=FBgn0051155.2 1 21 +
Chr2	stalkie_big_nohaplotig	exon	61325124	61325393	99	+	.	Parent=FBgn0051155.2.mrna1;Target=FBgn0051155.2 22 291 +
Chr2	stalkie_big_nohaplotig	exon	61325451	61325501	98	+	.	Parent=FBgn0051155.2.mrna1;Target=FBgn0051155.2 292 342 +
Chr2	stalkie_big_nohaplotig	exon	61325588	61325719	99	+	.	Parent=FBgn0051155.2.mrna1;Target=FBgn0051155.2 343 474 +
Chr2	stalkie_big_nohaplotig	exon	61325784	61325861	100	+	.	Parent=FBgn0051155.2.mrna1;Target=FBgn0051155.2 475 552 +
Chr2	stalkie_big_nohaplotig	CDS	61325016	61325036	.	+	0	Parent=FBgn0051155.2.mrna1;Target=FBgn0051155.2 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	61325124	61325393	.	+	0	Parent=FBgn0051155.2.mrna1;Target=FBgn0051155.2 22 291 +
Chr2	stalkie_big_nohaplotig	CDS	61325451	61325501	.	+	0	Parent=FBgn0051155.2.mrna1;Target=FBgn0051155.2 292 342 +
Chr2	stalkie_big_nohaplotig	CDS	61325588	61325719	.	+	0	Parent=FBgn0051155.2.mrna1;Target=FBgn0051155.2 343 474 +
Chr2	stalkie_big_nohaplotig	CDS	61325784	61325861	.	+	0	Parent=FBgn0051155.2.mrna1;Target=FBgn0051155.2 475 552 +
Chr2	gffcl	locus	61454810	61455364	.	+	.	ID=RLOC_00017809;geneIDs=CPIJ017423.path3;transcripts=CPIJ017423.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	61454810	61455364	.	+	.	ID=CPIJ017423.mrna3;geneID=CPIJ017423.path3;Name=CPIJ017423;Dir=indeterminatecoverage=93.0;identity=99.5;matches=552;mismatches=3;indels=0;unknowns=0;Target=CPIJ017423 597 43 .;locus=RLOC_00017809
Chr2	stalkie_big_nohaplotig	exon	61454810	61455364	99	+	.	Parent=CPIJ017423.mrna3
Chr2	stalkie_big_nohaplotig	CDS	61454810	61455364	.	+	0	Parent=CPIJ017423.mrna3
Chr2	gffcl	locus	61475201	61475904	.	+	.	ID=RLOC_00017810;geneIDs=comp150023_c0_seq1.path1;transcripts=comp150023_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61475201	61475904	.	+	.	ID=comp150023_c0_seq1.mrna1;geneID=comp150023_c0_seq1.path1;Name=comp150023_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=703;mismatches=1;indels=0;unknowns=0;Target=comp150023_c0_seq1 704 1 .;CDS_Target=comp150023_c0_seq1 249 130 .;locus=RLOC_00017810
Chr2	stalkie_big_nohaplotig	exon	61475201	61475904	99	+	.	Parent=comp150023_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	61475330	61475449	.	+	0	Parent=comp150023_c0_seq1.mrna1
Chr2	gffcl	locus	61499804	61510194	.	-	.	ID=RLOC_00017811;geneIDs=comp153911_c0_seq1.path1;transcripts=comp153911_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61499804	61510194	.	-	.	ID=comp153911_c0_seq1.mrna1;geneID=comp153911_c0_seq1.path1;Name=comp153911_c0_seq1;Dir=indeterminatecoverage=90.6;identity=96.5;matches=491;mismatches=17;indels=1;unknowns=0;Target=comp153911_c0_seq1 356 270 .;locus=RLOC_00017811
Chr2	stalkie_big_nohaplotig	exon	61499804	61500296	96	-	.	Parent=comp153911_c0_seq1.mrna1;Target=comp153911_c0_seq1 561 70 .
Chr2	stalkie_big_nohaplotig	exon	61506332	61506337	100	-	.	Parent=comp153911_c0_seq1.mrna1;Target=comp153911_c0_seq1 69 64 .
Chr2	stalkie_big_nohaplotig	exon	61510185	61510194	90	-	.	Parent=comp153911_c0_seq1.mrna1;Target=comp153911_c0_seq1 63 54 .
Chr2	stalkie_big_nohaplotig	CDS	61500009	61500095	.	-	0	Parent=comp153911_c0_seq1.mrna1
Chr2	gffcl	locus	61582373	61649805	.	-	.	ID=RLOC_00017812;geneIDs=FBgn0050089.path2;transcripts=FBgn0050089.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	61582373	61649805	.	-	.	ID=FBgn0050089.mrna2;geneID=FBgn0050089.path2;Name=FBgn0050089;Dir=sensecoverage=53.9;identity=99.4;matches=864;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017812
Chr2	stalkie_big_nohaplotig	exon	61582373	61582676	100	-	.	Parent=FBgn0050089.mrna2;Target=FBgn0050089 1383 1686 +
Chr2	stalkie_big_nohaplotig	exon	61582743	61583249	100	-	.	Parent=FBgn0050089.mrna2;Target=FBgn0050089 876 1382 +
Chr2	stalkie_big_nohaplotig	exon	61589683	61589690	75	-	.	Parent=FBgn0050089.mrna2;Target=FBgn0050089 868 875 +
Chr2	stalkie_big_nohaplotig	exon	61598958	61598970	100	-	.	Parent=FBgn0050089.mrna2;Target=FBgn0050089 814 826 +
Chr2	stalkie_big_nohaplotig	exon	61611575	61611581	100	-	.	Parent=FBgn0050089.mrna2;Target=FBgn0050089 807 813 +
Chr2	stalkie_big_nohaplotig	exon	61633702	61633703	100	-	.	Parent=FBgn0050089.mrna2;Target=FBgn0050089 805 806 +
Chr2	stalkie_big_nohaplotig	exon	61639808	61639815	62	-	.	Parent=FBgn0050089.mrna2;Target=FBgn0050089 797 804 +
Chr2	stalkie_big_nohaplotig	exon	61641755	61641760	100	-	.	Parent=FBgn0050089.mrna2;Target=FBgn0050089 791 796 +
Chr2	stalkie_big_nohaplotig	exon	61645693	61645697	100	-	.	Parent=FBgn0050089.mrna2;Target=FBgn0050089 786 790 +
Chr2	stalkie_big_nohaplotig	exon	61649798	61649805	100	-	.	Parent=FBgn0050089.mrna2;Target=FBgn0050089 778 785 +
Chr2	stalkie_big_nohaplotig	CDS	61639812	61639815	.	-	1	Parent=FBgn0050089.mrna2;Target=FBgn0050089 797 800 +
Chr2	stalkie_big_nohaplotig	CDS	61641755	61641760	.	-	1	Parent=FBgn0050089.mrna2;Target=FBgn0050089 791 796 +
Chr2	stalkie_big_nohaplotig	CDS	61645693	61645697	.	-	0	Parent=FBgn0050089.mrna2;Target=FBgn0050089 786 790 +
Chr2	stalkie_big_nohaplotig	CDS	61649798	61649803	.	-	0	Parent=FBgn0050089.mrna2;Target=FBgn0050089 780 785 +
Chr2	gffcl	locus	61599251	61609908	.	-	.	ID=RLOC_00017813;geneIDs=FBgn0050438.1.path1;transcripts=FBgn0050438.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61599251	61609908	.	-	.	ID=FBgn0050438.1.mrna1;geneID=FBgn0050438.1.path1;Name=FBgn0050438.1;Dir=sensecoverage=98.2;identity=99.9;matches=1550;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017813
Chr2	stalkie_big_nohaplotig	exon	61599251	61599392	100	-	.	Parent=FBgn0050438.1.mrna1;Target=FBgn0050438.1 1440 1581 +
Chr2	stalkie_big_nohaplotig	exon	61599453	61599575	100	-	.	Parent=FBgn0050438.1.mrna1;Target=FBgn0050438.1 1317 1439 +
Chr2	stalkie_big_nohaplotig	exon	61599640	61600304	99	-	.	Parent=FBgn0050438.1.mrna1;Target=FBgn0050438.1 652 1316 +
Chr2	stalkie_big_nohaplotig	exon	61600360	61600656	99	-	.	Parent=FBgn0050438.1.mrna1;Target=FBgn0050438.1 355 651 +
Chr2	stalkie_big_nohaplotig	exon	61606667	61606850	100	-	.	Parent=FBgn0050438.1.mrna1;Target=FBgn0050438.1 171 354 +
Chr2	stalkie_big_nohaplotig	exon	61609768	61609908	100	-	.	Parent=FBgn0050438.1.mrna1;Target=FBgn0050438.1 30 170 +
Chr2	stalkie_big_nohaplotig	CDS	61599251	61599392	.	-	1	Parent=FBgn0050438.1.mrna1;Target=FBgn0050438.1 1440 1581 +
Chr2	stalkie_big_nohaplotig	CDS	61599453	61599575	.	-	1	Parent=FBgn0050438.1.mrna1;Target=FBgn0050438.1 1317 1439 +
Chr2	stalkie_big_nohaplotig	CDS	61599640	61600304	.	-	0	Parent=FBgn0050438.1.mrna1;Target=FBgn0050438.1 652 1316 +
Chr2	stalkie_big_nohaplotig	CDS	61600360	61600656	.	-	0	Parent=FBgn0050438.1.mrna1;Target=FBgn0050438.1 355 651 +
Chr2	stalkie_big_nohaplotig	CDS	61606667	61606850	.	-	1	Parent=FBgn0050438.1.mrna1;Target=FBgn0050438.1 171 354 +
Chr2	stalkie_big_nohaplotig	CDS	61609768	61609907	.	-	0	Parent=FBgn0050438.1.mrna1;Target=FBgn0050438.1 31 170 +
Chr2	gffcl	locus	61675137	61675568	.	-	.	ID=RLOC_00017814;geneIDs=comp155591_c0_seq1.path1;transcripts=comp155591_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61675137	61675568	.	-	.	ID=comp155591_c0_seq1.mrna1;geneID=comp155591_c0_seq1.path1;Name=comp155591_c0_seq1;Dir=indeterminatecoverage=85.0;identity=99.8;matches=431;mismatches=1;indels=0;unknowns=0;Target=comp155591_c0_seq1 508 77 .;CDS_Target=comp155591_c0_seq1 112 77 .;locus=RLOC_00017814
Chr2	stalkie_big_nohaplotig	exon	61675137	61675568	99	-	.	Parent=comp155591_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	61675533	61675568	.	-	0	Parent=comp155591_c0_seq1.mrna1
Chr2	gffcl	locus	61675818	61677800	.	-	.	ID=RLOC_00017815;geneIDs=comp154842_c0_seq1.path1;transcripts=comp154842_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61675818	61677800	.	-	.	ID=comp154842_c0_seq1.mrna1;geneID=comp154842_c0_seq1.path1;Name=comp154842_c0_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=1912;mismatches=11;indels=3;unknowns=0;Target=comp154842_c0_seq1 1134 1577 .;locus=RLOC_00017815
Chr2	stalkie_big_nohaplotig	exon	61675818	61676586	98	-	.	Parent=comp154842_c0_seq1.mrna1;Target=comp154842_c0_seq1 1 767 -
Chr2	stalkie_big_nohaplotig	exon	61676645	61677800	99	-	.	Parent=comp154842_c0_seq1.mrna1;Target=comp154842_c0_seq1 768 1924 -
Chr2	stalkie_big_nohaplotig	CDS	61677011	61677453	.	-	0	Parent=comp154842_c0_seq1.mrna1
Chr2	gffcl	locus	61681037	61681495	.	+	.	ID=RLOC_00017816;geneIDs=FBgn0033550.1.path1;transcripts=FBgn0033550.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61681037	61681495	.	+	.	ID=FBgn0033550.1.mrna1;geneID=FBgn0033550.1.path1;Name=FBgn0033550.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=457;mismatches=2;indels=0;unknowns=0;Target=FBgn0033550.1 459 1 .;locus=RLOC_00017816
Chr2	stalkie_big_nohaplotig	exon	61681037	61681495	99	+	.	Parent=FBgn0033550.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	61681037	61681495	.	+	0	Parent=FBgn0033550.1.mrna1
Chr2	gffcl	locus	61687198	61688136	.	-	.	ID=RLOC_00017817;geneIDs=FBgn0033549.1.path1;transcripts=FBgn0033549.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61687198	61688136	.	-	.	ID=FBgn0033549.1.mrna1;geneID=FBgn0033549.1.path1;Name=FBgn0033549.1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=928;mismatches=11;indels=0;unknowns=0;Target=FBgn0033549.1 939 1 .;locus=RLOC_00017817
Chr2	stalkie_big_nohaplotig	exon	61687198	61688136	98	-	.	Parent=FBgn0033549.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	61687198	61688136	.	-	0	Parent=FBgn0033549.1.mrna1
Chr2	gffcl	locus	61689098	61689356	.	+	.	ID=RLOC_00017818;geneIDs=FBgn0033548.1.path1;transcripts=FBgn0033548.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61689098	61689356	.	+	.	ID=FBgn0033548.1.mrna1;geneID=FBgn0033548.1.path1;Name=FBgn0033548.1;Dir=sensecoverage=100.0;identity=99.0;matches=202;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017818
Chr2	stalkie_big_nohaplotig	exon	61689098	61689163	100	+	.	Parent=FBgn0033548.1.mrna1;Target=FBgn0033548.1 1 66 +
Chr2	stalkie_big_nohaplotig	exon	61689219	61689356	98	+	.	Parent=FBgn0033548.1.mrna1;Target=FBgn0033548.1 67 204 +
Chr2	stalkie_big_nohaplotig	CDS	61689098	61689163	.	+	0	Parent=FBgn0033548.1.mrna1;Target=FBgn0033548.1 1 66 +
Chr2	stalkie_big_nohaplotig	CDS	61689219	61689356	.	+	0	Parent=FBgn0033548.1.mrna1;Target=FBgn0033548.1 67 204 +
Chr2	gffcl	locus	61689448	61690262	.	-	.	ID=RLOC_00017819;geneIDs=FBgn0033547.1.path1;transcripts=FBgn0033547.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61689448	61690262	.	-	.	ID=FBgn0033547.1.mrna1;geneID=FBgn0033547.1.path1;Name=FBgn0033547.1;Dir=sensecoverage=100.0;identity=99.7;matches=757;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017819
Chr2	stalkie_big_nohaplotig	exon	61689448	61689737	99	-	.	Parent=FBgn0033547.1.mrna1;Target=FBgn0033547.1 470 759 +
Chr2	stalkie_big_nohaplotig	exon	61689794	61690262	100	-	.	Parent=FBgn0033547.1.mrna1;Target=FBgn0033547.1 1 469 +
Chr2	stalkie_big_nohaplotig	CDS	61689448	61689737	.	-	2	Parent=FBgn0033547.1.mrna1;Target=FBgn0033547.1 470 759 +
Chr2	stalkie_big_nohaplotig	CDS	61689794	61690262	.	-	0	Parent=FBgn0033547.1.mrna1;Target=FBgn0033547.1 1 469 +
Chr2	gffcl	locus	61705401	61709599	.	+	.	ID=RLOC_00017820;geneIDs=FBgn0027499.1.path1;transcripts=FBgn0027499.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61705401	61709599	.	+	.	ID=FBgn0027499.1.mrna1;geneID=FBgn0027499.1.path1;Name=FBgn0027499.1;Dir=sensecoverage=100.0;identity=99.4;matches=3978;mismatches=24;indels=0;unknowns=0;locus=RLOC_00017820
Chr2	stalkie_big_nohaplotig	exon	61705401	61705548	100	+	.	Parent=FBgn0027499.1.mrna1;Target=FBgn0027499.1 1 148 +
Chr2	stalkie_big_nohaplotig	exon	61705612	61708648	99	+	.	Parent=FBgn0027499.1.mrna1;Target=FBgn0027499.1 149 3185 +
Chr2	stalkie_big_nohaplotig	exon	61708718	61709070	98	+	.	Parent=FBgn0027499.1.mrna1;Target=FBgn0027499.1 3186 3538 +
Chr2	stalkie_big_nohaplotig	exon	61709136	61709599	99	+	.	Parent=FBgn0027499.1.mrna1;Target=FBgn0027499.1 3539 4002 +
Chr2	stalkie_big_nohaplotig	CDS	61705401	61705548	.	+	0	Parent=FBgn0027499.1.mrna1;Target=FBgn0027499.1 1 148 +
Chr2	stalkie_big_nohaplotig	CDS	61705612	61708648	.	+	2	Parent=FBgn0027499.1.mrna1;Target=FBgn0027499.1 149 3185 +
Chr2	stalkie_big_nohaplotig	CDS	61708718	61709070	.	+	1	Parent=FBgn0027499.1.mrna1;Target=FBgn0027499.1 3186 3538 +
Chr2	stalkie_big_nohaplotig	CDS	61709136	61709599	.	+	2	Parent=FBgn0027499.1.mrna1;Target=FBgn0027499.1 3539 4002 +
Chr2	gffcl	locus	61722312	61725356	.	-	.	ID=RLOC_00017821;geneIDs=FBgn0034394.1.path1;transcripts=FBgn0034394.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61722312	61725356	.	-	.	ID=FBgn0034394.1.mrna1;geneID=FBgn0034394.1.path1;Name=FBgn0034394.1;Dir=sensecoverage=100.0;identity=99.8;matches=1434;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017821
Chr2	stalkie_big_nohaplotig	exon	61722312	61722485	99	-	.	Parent=FBgn0034394.1.mrna1;Target=FBgn0034394.1 1264 1437 +
Chr2	stalkie_big_nohaplotig	exon	61722556	61723635	99	-	.	Parent=FBgn0034394.1.mrna1;Target=FBgn0034394.1 184 1263 +
Chr2	stalkie_big_nohaplotig	exon	61723699	61723835	100	-	.	Parent=FBgn0034394.1.mrna1;Target=FBgn0034394.1 47 183 +
Chr2	stalkie_big_nohaplotig	exon	61725311	61725356	100	-	.	Parent=FBgn0034394.1.mrna1;Target=FBgn0034394.1 1 46 +
Chr2	stalkie_big_nohaplotig	CDS	61722312	61722485	.	-	0	Parent=FBgn0034394.1.mrna1;Target=FBgn0034394.1 1264 1437 +
Chr2	stalkie_big_nohaplotig	CDS	61722556	61723635	.	-	0	Parent=FBgn0034394.1.mrna1;Target=FBgn0034394.1 184 1263 +
Chr2	stalkie_big_nohaplotig	CDS	61723699	61723835	.	-	2	Parent=FBgn0034394.1.mrna1;Target=FBgn0034394.1 47 183 +
Chr2	stalkie_big_nohaplotig	CDS	61725311	61725356	.	-	0	Parent=FBgn0034394.1.mrna1;Target=FBgn0034394.1 1 46 +
Chr2	gffcl	locus	61875505	61876328	.	-	.	ID=RLOC_00017822;geneIDs=comp146182_c0_seq1.path1;transcripts=comp146182_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61875505	61876328	.	-	.	ID=comp146182_c0_seq1.mrna1;geneID=comp146182_c0_seq1.path1;Name=comp146182_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.3;matches=818;mismatches=6;indels=0;unknowns=0;Target=comp146182_c0_seq1 824 1 .;CDS_Target=comp146182_c0_seq1 744 151 .;locus=RLOC_00017822
Chr2	stalkie_big_nohaplotig	exon	61875505	61876328	99	-	.	Parent=comp146182_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	61875585	61876178	.	-	0	Parent=comp146182_c0_seq1.mrna1
Chr2	gffcl	locus	61876631	61973553	.	+	.	ID=RLOC_00017823;geneIDs=FBgn0053144.1.path1;transcripts=FBgn0053144.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61876631	61973553	.	+	.	ID=FBgn0053144.1.mrna1;geneID=FBgn0053144.1.path1;Name=FBgn0053144.1;Dir=sensecoverage=100.0;identity=99.9;matches=3828;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017823
Chr2	stalkie_big_nohaplotig	exon	61876631	61877968	100	+	.	Parent=FBgn0053144.1.mrna1;Target=FBgn0053144.1 1 1338 +
Chr2	stalkie_big_nohaplotig	exon	61878197	61879855	99	+	.	Parent=FBgn0053144.1.mrna1;Target=FBgn0053144.1 1339 2997 +
Chr2	stalkie_big_nohaplotig	exon	61970743	61970905	100	+	.	Parent=FBgn0053144.1.mrna1;Target=FBgn0053144.1 2998 3160 +
Chr2	stalkie_big_nohaplotig	exon	61970970	61971184	100	+	.	Parent=FBgn0053144.1.mrna1;Target=FBgn0053144.1 3161 3375 +
Chr2	stalkie_big_nohaplotig	exon	61971249	61971452	100	+	.	Parent=FBgn0053144.1.mrna1;Target=FBgn0053144.1 3376 3579 +
Chr2	stalkie_big_nohaplotig	exon	61973303	61973553	100	+	.	Parent=FBgn0053144.1.mrna1;Target=FBgn0053144.1 3580 3830 +
Chr2	stalkie_big_nohaplotig	CDS	61876631	61877968	.	+	0	Parent=FBgn0053144.1.mrna1;Target=FBgn0053144.1 1 1338 +
Chr2	stalkie_big_nohaplotig	CDS	61878197	61879855	.	+	0	Parent=FBgn0053144.1.mrna1;Target=FBgn0053144.1 1339 2997 +
Chr2	stalkie_big_nohaplotig	CDS	61970743	61970905	.	+	0	Parent=FBgn0053144.1.mrna1;Target=FBgn0053144.1 2998 3160 +
Chr2	stalkie_big_nohaplotig	CDS	61970970	61971184	.	+	2	Parent=FBgn0053144.1.mrna1;Target=FBgn0053144.1 3161 3375 +
Chr2	stalkie_big_nohaplotig	CDS	61971249	61971452	.	+	0	Parent=FBgn0053144.1.mrna1;Target=FBgn0053144.1 3376 3579 +
Chr2	stalkie_big_nohaplotig	CDS	61973303	61973551	.	+	0	Parent=FBgn0053144.1.mrna1;Target=FBgn0053144.1 3580 3828 +
Chr2	gffcl	locus	61971536	61972395	.	+	.	ID=RLOC_00017824;geneIDs=comp156020_c0_seq1.path1;transcripts=comp156020_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61971536	61972395	.	+	.	ID=comp156020_c0_seq1.mrna1;geneID=comp156020_c0_seq1.path1;Name=comp156020_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.9;matches=773;mismatches=31;indels=19;unknowns=0;Target=comp156020_c0_seq1 385 260 .;locus=RLOC_00017824
Chr2	stalkie_big_nohaplotig	exon	61971536	61972178	92	+	.	Parent=comp156020_c0_seq1.mrna1;Target=comp156020_c0_seq1 627 1 .
Chr2	stalkie_big_nohaplotig	exon	61972204	61972292	96	+	.	Parent=comp156020_c0_seq1.mrna1;Target=comp156020_c0_seq1 724 637 .
Chr2	stalkie_big_nohaplotig	exon	61972306	61972395	98	+	.	Parent=comp156020_c0_seq1.mrna1;Target=comp156020_c0_seq1 816 727 .
Chr2	stalkie_big_nohaplotig	CDS	61971811	61971936	.	+	0	Parent=comp156020_c0_seq1.mrna1
Chr2	gffcl	locus	61974162	61974749	.	-	.	ID=RLOC_00017825;geneIDs=comp156772_c1_seq1.path1;transcripts=comp156772_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61974162	61974749	.	-	.	ID=comp156772_c1_seq1.mrna1;geneID=comp156772_c1_seq1.path1;Name=comp156772_c1_seq1;Dir=indeterminatecoverage=96.6;identity=100.0;matches=588;mismatches=0;indels=0;unknowns=0;Target=comp156772_c1_seq1 609 22 .;CDS_Target=comp156772_c1_seq1 129 22 .;locus=RLOC_00017825
Chr2	stalkie_big_nohaplotig	exon	61974162	61974749	100	-	.	Parent=comp156772_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	61974642	61974749	.	-	0	Parent=comp156772_c1_seq1.mrna1
Chr2	gffcl	locus	61976623	61979308	.	-	.	ID=RLOC_00017826;geneIDs=comp161591_c2_seq1.path1;transcripts=comp161591_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61976623	61979308	.	-	.	ID=comp161591_c2_seq1.mrna1;geneID=comp161591_c2_seq1.path1;Name=comp161591_c2_seq1;Dir=antisensecoverage=100.0;identity=93.8;matches=1413;mismatches=21;indels=72;unknowns=0;Target=comp161591_c2_seq1 642 647 .;locus=RLOC_00017826
Chr2	stalkie_big_nohaplotig	exon	61976623	61977629	91	-	.	Parent=comp161591_c2_seq1.mrna1;Target=comp161591_c2_seq1 1 1073 -
Chr2	stalkie_big_nohaplotig	exon	61977727	61977808	100	-	.	Parent=comp161591_c2_seq1.mrna1;Target=comp161591_c2_seq1 1074 1155 -
Chr2	stalkie_big_nohaplotig	exon	61978895	61978939	100	-	.	Parent=comp161591_c2_seq1.mrna1;Target=comp161591_c2_seq1 1156 1200 -
Chr2	stalkie_big_nohaplotig	exon	61979006	61979308	98	-	.	Parent=comp161591_c2_seq1.mrna1;Target=comp161591_c2_seq1 1201 1503 -
Chr2	stalkie_big_nohaplotig	CDS	61977198	61977203	.	-	0	Parent=comp161591_c2_seq1.mrna1
Chr2	gffcl	locus	61982119	61983074	.	+	.	ID=RLOC_00017827;geneIDs=FBgn0024956.1.path1;transcripts=FBgn0024956.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61982119	61983074	.	+	.	ID=FBgn0024956.1.mrna1;geneID=FBgn0024956.1.path1;Name=FBgn0024956.1;Dir=indeterminatecoverage=99.9;identity=98.7;matches=944;mismatches=12;indels=0;unknowns=0;Target=FBgn0024956.1 956 1 .;CDS_Target=FBgn0024956.1 954 1 .;locus=RLOC_00017827
Chr2	stalkie_big_nohaplotig	exon	61982119	61983074	98	+	.	Parent=FBgn0024956.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	61982119	61983072	.	+	0	Parent=FBgn0024956.1.mrna1
Chr2	gffcl	locus	61984600	61993250	.	-	.	ID=RLOC_00017828;geneIDs=FBgn0033544.1.path1,comp146629_c0_seq1.path1,comp149608_c0_seq1.path1;transcripts=comp146629_c0_seq1.mrna1,FBgn0033544.1.mrna1,comp149608_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61984600	61987895	.	-	.	ID=comp146629_c0_seq1.mrna1;geneID=comp146629_c0_seq1.path1;Name=comp146629_c0_seq1;Dir=sensecoverage=99.9;identity=93.5;matches=2221;mismatches=64;indels=91;unknowns=0;locus=RLOC_00017828
Chr2	stalkie_big_nohaplotig	exon	61984600	61986622	92	-	.	Parent=comp146629_c0_seq1.mrna1;Target=comp146629_c0_seq1 308 2331 +
Chr2	stalkie_big_nohaplotig	exon	61986692	61986923	100	-	.	Parent=comp146629_c0_seq1.mrna1;Target=comp146629_c0_seq1 76 307 +
Chr2	stalkie_big_nohaplotig	exon	61987821	61987895	98	-	.	Parent=comp146629_c0_seq1.mrna1;Target=comp146629_c0_seq1 1 75 +
Chr2	stalkie_big_nohaplotig	CDS	61986609	61986622	.	-	2	Parent=comp146629_c0_seq1.mrna1;Target=comp146629_c0_seq1 308 321 +
Chr2	stalkie_big_nohaplotig	CDS	61986692	61986923	.	-	0	Parent=comp146629_c0_seq1.mrna1;Target=comp146629_c0_seq1 76 307 +
Chr2	stalkie_big_nohaplotig	CDS	61987821	61987895	.	-	0	Parent=comp146629_c0_seq1.mrna1;Target=comp146629_c0_seq1 1 75 +
Chr2	stalkie_big_nohaplotig	mRNA	61986692	61993250	.	-	.	ID=FBgn0033544.1.mrna1;geneID=FBgn0033544.1.path1;Name=FBgn0033544.1;Dir=sensecoverage=98.1;identity=99.8;matches=579;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017828
Chr2	stalkie_big_nohaplotig	exon	61986692	61986923	100	-	.	Parent=FBgn0033544.1.mrna1;Target=FBgn0033544.1 349 580 +
Chr2	stalkie_big_nohaplotig	exon	61987821	61987923	99	-	.	Parent=FBgn0033544.1.mrna1;Target=FBgn0033544.1 246 348 +
Chr2	stalkie_big_nohaplotig	exon	61987990	61988081	100	-	.	Parent=FBgn0033544.1.mrna1;Target=FBgn0033544.1 154 245 +
Chr2	stalkie_big_nohaplotig	exon	61993098	61993250	100	-	.	Parent=FBgn0033544.1.mrna1;Target=FBgn0033544.1 1 153 +
Chr2	stalkie_big_nohaplotig	CDS	61986693	61986923	.	-	0	Parent=FBgn0033544.1.mrna1;Target=FBgn0033544.1 349 579 +
Chr2	stalkie_big_nohaplotig	CDS	61987821	61987923	.	-	1	Parent=FBgn0033544.1.mrna1;Target=FBgn0033544.1 246 348 +
Chr2	stalkie_big_nohaplotig	CDS	61987990	61988081	.	-	0	Parent=FBgn0033544.1.mrna1;Target=FBgn0033544.1 154 245 +
Chr2	stalkie_big_nohaplotig	CDS	61993098	61993250	.	-	0	Parent=FBgn0033544.1.mrna1;Target=FBgn0033544.1 1 153 +
Chr2	stalkie_big_nohaplotig	mRNA	61986903	61987515	.	-	.	ID=comp149608_c0_seq1.mrna1;geneID=comp149608_c0_seq1.path1;Name=comp149608_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=613;mismatches=0;indels=0;unknowns=0;Target=comp149608_c0_seq1 613 1 .;CDS_Target=comp149608_c0_seq1 200 144 .;locus=RLOC_00017828
Chr2	stalkie_big_nohaplotig	exon	61986903	61987515	100	-	.	Parent=comp149608_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	61987316	61987372	.	-	0	Parent=comp149608_c0_seq1.mrna1
Chr2	gffcl	locus	61989467	61989961	.	-	.	ID=RLOC_00017829;geneIDs=comp146700_c0_seq1.path1;transcripts=comp146700_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61989467	61989961	.	-	.	ID=comp146700_c0_seq1.mrna1;geneID=comp146700_c0_seq1.path1;Name=comp146700_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.9;matches=451;mismatches=15;indels=30;unknowns=0;Target=comp146700_c0_seq1 467 1 .;CDS_Target=comp146700_c0_seq1 365 261 .;locus=RLOC_00017829
Chr2	stalkie_big_nohaplotig	exon	61989467	61989961	90	-	.	Parent=comp146700_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	61989569	61989702	.	-	0	Parent=comp146700_c0_seq1.mrna1
Chr2	gffcl	locus	61993553	61994498	.	-	.	ID=RLOC_00017830;geneIDs=comp151088_c0_seq1.path1;transcripts=comp151088_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61993553	61994498	.	-	.	ID=comp151088_c0_seq1.mrna1;geneID=comp151088_c0_seq1.path1;Name=comp151088_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=946;mismatches=0;indels=2;unknowns=0;Target=comp151088_c0_seq1 948 1 .;CDS_Target=comp151088_c0_seq1 127 2 .;locus=RLOC_00017830
Chr2	stalkie_big_nohaplotig	exon	61993553	61994498	99	-	.	Parent=comp151088_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	61994372	61994497	.	-	0	Parent=comp151088_c0_seq1.mrna1
Chr2	gffcl	locus	61994734	61997137	.	.	.	ID=RLOC_00017831;geneIDs=comp145129_c0_seq1.path1,comp163723_c4_seq1.path1;transcripts=comp163723_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61994734	61996412	.	+	.	ID=comp163723_c4_seq1.mrna1;geneID=comp163723_c4_seq1.path1;Name=comp163723_c4_seq1;Dir=indeterminatecoverage=98.7;identity=98.0;matches=1646;mismatches=32;indels=2;unknowns=0;Target=comp163723_c4_seq1 1679 1 .;CDS_Target=comp163723_c4_seq1 1658 1512 .;locus=RLOC_00017831
Chr2	stalkie_big_nohaplotig	exon	61994734	61996412	97	+	.	Parent=comp163723_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	61996245	61996391	.	+	0	Parent=comp163723_c4_seq1.mrna1
Chr2	gffcl	locus	61998354	61998887	.	+	.	ID=RLOC_00017832;geneIDs=comp151937_c0_seq1.path1;transcripts=comp151937_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	61998354	61998887	.	+	.	ID=comp151937_c0_seq1.mrna1;geneID=comp151937_c0_seq1.path1;Name=comp151937_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.3;matches=515;mismatches=17;indels=3;unknowns=0;Target=comp151937_c0_seq1 533 1 .;CDS_Target=comp151937_c0_seq1 340 191 .;locus=RLOC_00017832
Chr2	stalkie_big_nohaplotig	exon	61998354	61998887	96	+	.	Parent=comp151937_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	61998544	61998692	.	+	0	Parent=comp151937_c0_seq1.mrna1
Chr2	gffcl	locus	62001158	62002284	.	+	.	ID=RLOC_00017833;geneIDs=comp159283_c0_seq1.path1;transcripts=comp159283_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62001158	62002284	.	+	.	ID=comp159283_c0_seq1.mrna1;geneID=comp159283_c0_seq1.path1;Name=comp159283_c0_seq1;Dir=indeterminatecoverage=97.6;identity=99.2;matches=1118;mismatches=9;indels=0;unknowns=0;Target=comp159283_c0_seq1 1129 3 .;CDS_Target=comp159283_c0_seq1 1117 959 .;locus=RLOC_00017833
Chr2	stalkie_big_nohaplotig	exon	62001158	62002284	99	+	.	Parent=comp159283_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62002114	62002272	.	+	0	Parent=comp159283_c0_seq1.mrna1
Chr2	gffcl	locus	62014135	62014989	.	-	.	ID=RLOC_00017834;geneIDs=comp155897_c0_seq1.path1;transcripts=comp155897_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62014135	62014989	.	-	.	ID=comp155897_c0_seq1.mrna1;geneID=comp155897_c0_seq1.path1;Name=comp155897_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=855;mismatches=0;indels=0;unknowns=0;Target=comp155897_c0_seq1 855 1 .;CDS_Target=comp155897_c0_seq1 749 630 .;locus=RLOC_00017834
Chr2	stalkie_big_nohaplotig	exon	62014135	62014989	100	-	.	Parent=comp155897_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62014241	62014360	.	-	0	Parent=comp155897_c0_seq1.mrna1
Chr2	gffcl	locus	62025553	62030357	.	-	.	ID=RLOC_00017835;geneIDs=FBgn0033543.1.path1,comp163010_c0_seq1.path1;transcripts=comp163010_c0_seq1.mrna1,FBgn0033543.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62025553	62030357	.	-	.	ID=comp163010_c0_seq1.mrna1;geneID=comp163010_c0_seq1.path1;Name=comp163010_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.2;matches=3657;mismatches=27;indels=3;unknowns=0;locus=RLOC_00017835
Chr2	stalkie_big_nohaplotig	exon	62025553	62026068	97	-	.	Parent=comp163010_c0_seq1.mrna1;Target=comp163010_c0_seq1 3685 3170 .
Chr2	stalkie_big_nohaplotig	exon	62026946	62029136	99	-	.	Parent=comp163010_c0_seq1.mrna1;Target=comp163010_c0_seq1 3169 979 .
Chr2	stalkie_big_nohaplotig	exon	62029311	62029434	100	-	.	Parent=comp163010_c0_seq1.mrna1;Target=comp163010_c0_seq1 978 855 .
Chr2	stalkie_big_nohaplotig	exon	62029503	62030357	98	-	.	Parent=comp163010_c0_seq1.mrna1;Target=comp163010_c0_seq1 854 1 .
Chr2	stalkie_big_nohaplotig	CDS	62028987	62029136	.	-	0	Parent=comp163010_c0_seq1.mrna1;Target=comp163010_c0_seq1 1128 979 .
Chr2	stalkie_big_nohaplotig	CDS	62029311	62029434	.	-	1	Parent=comp163010_c0_seq1.mrna1;Target=comp163010_c0_seq1 978 855 .
Chr2	stalkie_big_nohaplotig	CDS	62029503	62029690	.	-	0	Parent=comp163010_c0_seq1.mrna1;Target=comp163010_c0_seq1 854 667 .
Chr2	stalkie_big_nohaplotig	mRNA	62025737	62029750	.	-	.	ID=FBgn0033543.1.mrna1;geneID=FBgn0033543.1.path1;Name=FBgn0033543.1;Dir=sensecoverage=100.0;identity=99.2;matches=1057;mismatches=8;indels=0;unknowns=0;locus=RLOC_00017835
Chr2	stalkie_big_nohaplotig	exon	62025737	62026283	98	-	.	Parent=FBgn0033543.1.mrna1;Target=FBgn0033543.1 519 1065 +
Chr2	stalkie_big_nohaplotig	exon	62028991	62029136	100	-	.	Parent=FBgn0033543.1.mrna1;Target=FBgn0033543.1 373 518 +
Chr2	stalkie_big_nohaplotig	exon	62029311	62029434	100	-	.	Parent=FBgn0033543.1.mrna1;Target=FBgn0033543.1 249 372 +
Chr2	stalkie_big_nohaplotig	exon	62029503	62029750	99	-	.	Parent=FBgn0033543.1.mrna1;Target=FBgn0033543.1 1 248 +
Chr2	stalkie_big_nohaplotig	CDS	62025737	62026283	.	-	1	Parent=FBgn0033543.1.mrna1;Target=FBgn0033543.1 519 1065 +
Chr2	stalkie_big_nohaplotig	CDS	62028991	62029136	.	-	0	Parent=FBgn0033543.1.mrna1;Target=FBgn0033543.1 373 518 +
Chr2	stalkie_big_nohaplotig	CDS	62029311	62029434	.	-	1	Parent=FBgn0033543.1.mrna1;Target=FBgn0033543.1 249 372 +
Chr2	stalkie_big_nohaplotig	CDS	62029503	62029750	.	-	0	Parent=FBgn0033543.1.mrna1;Target=FBgn0033543.1 1 248 +
Chr2	gffcl	locus	62051984	62059152	.	+	.	ID=RLOC_00017836;geneIDs=FBgn0005586.1.path1;transcripts=FBgn0005586.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62051984	62059152	.	+	.	ID=FBgn0005586.1.mrna1;geneID=FBgn0005586.1.path1;Name=FBgn0005586.1;Dir=sensecoverage=96.5;identity=100.0;matches=660;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017836
Chr2	stalkie_big_nohaplotig	exon	62051984	62052208	100	+	.	Parent=FBgn0005586.1.mrna1;Target=FBgn0005586.1 25 249 +
Chr2	stalkie_big_nohaplotig	exon	62058576	62058694	100	+	.	Parent=FBgn0005586.1.mrna1;Target=FBgn0005586.1 250 368 +
Chr2	stalkie_big_nohaplotig	exon	62058769	62058940	100	+	.	Parent=FBgn0005586.1.mrna1;Target=FBgn0005586.1 369 540 +
Chr2	stalkie_big_nohaplotig	exon	62059009	62059152	100	+	.	Parent=FBgn0005586.1.mrna1;Target=FBgn0005586.1 541 684 +
Chr2	stalkie_big_nohaplotig	CDS	62051984	62052208	.	+	0	Parent=FBgn0005586.1.mrna1;Target=FBgn0005586.1 25 249 +
Chr2	stalkie_big_nohaplotig	CDS	62058576	62058694	.	+	0	Parent=FBgn0005586.1.mrna1;Target=FBgn0005586.1 250 368 +
Chr2	stalkie_big_nohaplotig	CDS	62058769	62058940	.	+	1	Parent=FBgn0005586.1.mrna1;Target=FBgn0005586.1 369 540 +
Chr2	stalkie_big_nohaplotig	CDS	62059009	62059152	.	+	0	Parent=FBgn0005586.1.mrna1;Target=FBgn0005586.1 541 684 +
Chr2	gffcl	locus	62059258	62059492	.	+	.	ID=RLOC_00017837;geneIDs=comp107131_c0_seq1.path1;transcripts=comp107131_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62059258	62059492	.	+	.	ID=comp107131_c0_seq1.mrna1;geneID=comp107131_c0_seq1.path1;Name=comp107131_c0_seq1;Dir=indeterminatecoverage=93.3;identity=100.0;matches=235;mismatches=0;indels=0;unknowns=0;Target=comp107131_c0_seq1 252 18 .;CDS_Target=comp107131_c0_seq1 56 18 .;locus=RLOC_00017837
Chr2	stalkie_big_nohaplotig	exon	62059258	62059492	100	+	.	Parent=comp107131_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62059258	62059296	.	+	0	Parent=comp107131_c0_seq1.mrna1
Chr2	gffcl	locus	62059626	62060205	.	+	.	ID=RLOC_00017838;geneIDs=comp154674_c0_seq1.path1;transcripts=comp154674_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62059626	62060205	.	+	.	ID=comp154674_c0_seq1.mrna1;geneID=comp154674_c0_seq1.path1;Name=comp154674_c0_seq1;Dir=indeterminatecoverage=97.8;identity=96.6;matches=563;mismatches=17;indels=3;unknowns=0;Target=comp154674_c0_seq1 596 14 .;CDS_Target=comp154674_c0_seq1 211 101 .;locus=RLOC_00017838
Chr2	stalkie_big_nohaplotig	exon	62059626	62060205	96	+	.	Parent=comp154674_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62059713	62059821	.	+	0	Parent=comp154674_c0_seq1.mrna1
Chr2	gffcl	locus	62060410	62060962	.	-	.	ID=RLOC_00017839;geneIDs=comp147769_c0_seq1.path1;transcripts=comp147769_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62060410	62060962	.	-	.	ID=comp147769_c0_seq1.mrna1;geneID=comp147769_c0_seq1.path1;Name=comp147769_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=550;mismatches=3;indels=0;unknowns=0;Target=comp147769_c0_seq1 553 1 .;CDS_Target=comp147769_c0_seq1 203 132 .;locus=RLOC_00017839
Chr2	stalkie_big_nohaplotig	exon	62060410	62060962	99	-	.	Parent=comp147769_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62060760	62060831	.	-	0	Parent=comp147769_c0_seq1.mrna1
Chr2	gffcl	locus	62062194	62062539	.	-	.	ID=RLOC_00017840;geneIDs=comp143862_c0_seq1.path1;transcripts=comp143862_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62062194	62062539	.	-	.	ID=comp143862_c0_seq1.mrna1;geneID=comp143862_c0_seq1.path1;Name=comp143862_c0_seq1;Dir=indeterminatecoverage=92.5;identity=99.1;matches=343;mismatches=3;indels=0;unknowns=0;Target=comp143862_c0_seq1 374 29 .;CDS_Target=comp143862_c0_seq1 95 39 .;locus=RLOC_00017840
Chr2	stalkie_big_nohaplotig	exon	62062194	62062539	99	-	.	Parent=comp143862_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62062473	62062529	.	-	0	Parent=comp143862_c0_seq1.mrna1
Chr2	gffcl	locus	62062745	63262834	.	+	.	ID=RLOC_00017841;geneIDs=comp116015_c0_seq1.path1;transcripts=comp116015_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62062745	63262834	.	+	.	ID=comp116015_c0_seq1.mrna1;geneID=comp116015_c0_seq1.path1;Name=comp116015_c0_seq1;Dir=indeterminatecoverage=81.7;identity=98.7;matches=309;mismatches=4;indels=0;unknowns=0;Target=comp116015_c0_seq1 306 205 .;locus=RLOC_00017841
Chr2	stalkie_big_nohaplotig	exon	62062745	62062997	98	+	.	Parent=comp116015_c0_seq1.mrna1;Target=comp116015_c0_seq1 312 60 .
Chr2	stalkie_big_nohaplotig	exon	63240577	63240585	100	+	.	Parent=comp116015_c0_seq1.mrna1;Target=comp116015_c0_seq1 321 313 .
Chr2	stalkie_big_nohaplotig	exon	63243973	63243984	100	+	.	Parent=comp116015_c0_seq1.mrna1;Target=comp116015_c0_seq1 333 322 .
Chr2	stalkie_big_nohaplotig	exon	63257259	63257261	100	+	.	Parent=comp116015_c0_seq1.mrna1;Target=comp116015_c0_seq1 340 338 .
Chr2	stalkie_big_nohaplotig	exon	63260670	63260681	100	+	.	Parent=comp116015_c0_seq1.mrna1;Target=comp116015_c0_seq1 352 341 .
Chr2	stalkie_big_nohaplotig	exon	63261743	63261750	100	+	.	Parent=comp116015_c0_seq1.mrna1;Target=comp116015_c0_seq1 365 358 .
Chr2	stalkie_big_nohaplotig	exon	63261959	63261961	100	+	.	Parent=comp116015_c0_seq1.mrna1;Target=comp116015_c0_seq1 368 366 .
Chr2	stalkie_big_nohaplotig	exon	63262822	63262834	100	+	.	Parent=comp116015_c0_seq1.mrna1;Target=comp116015_c0_seq1 381 369 .
Chr2	stalkie_big_nohaplotig	CDS	62062890	62062991	.	+	0	Parent=comp116015_c0_seq1.mrna1
Chr2	gffcl	locus	62064578	62065660	.	-	.	ID=RLOC_00017842;geneIDs=comp154161_c0_seq1.path1;transcripts=comp154161_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62064578	62065660	.	-	.	ID=comp154161_c0_seq1.mrna1;geneID=comp154161_c0_seq1.path1;Name=comp154161_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1082;mismatches=1;indels=2;unknowns=0;Target=comp154161_c0_seq1 1085 1 .;CDS_Target=comp154161_c0_seq1 456 349 .;locus=RLOC_00017842
Chr2	stalkie_big_nohaplotig	exon	62064578	62065660	99	-	.	Parent=comp154161_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62065205	62065312	.	-	0	Parent=comp154161_c0_seq1.mrna1
Chr2	gffcl	locus	62070379	62071344	.	-	.	ID=RLOC_00017843;geneIDs=comp157048_c0_seq1.path1;transcripts=comp157048_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62070379	62071344	.	-	.	ID=comp157048_c0_seq1.mrna1;geneID=comp157048_c0_seq1.path1;Name=comp157048_c0_seq1;Dir=sensecoverage=93.4;identity=99.9;matches=879;mismatches=1;indels=0;unknowns=0;Target=comp157048_c0_seq1 394 534 +;locus=RLOC_00017843
Chr2	stalkie_big_nohaplotig	exon	62070379	62071119	99	-	.	Parent=comp157048_c0_seq1.mrna1;Target=comp157048_c0_seq1 202 942 +
Chr2	stalkie_big_nohaplotig	exon	62071206	62071344	100	-	.	Parent=comp157048_c0_seq1.mrna1;Target=comp157048_c0_seq1 63 201 +
Chr2	stalkie_big_nohaplotig	CDS	62070787	62070927	.	-	0	Parent=comp157048_c0_seq1.mrna1
Chr2	gffcl	locus	62082149	62094685	.	-	.	ID=RLOC_00017844;geneIDs=FBgn0024836.1.path1;transcripts=FBgn0024836.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62082149	62094685	.	-	.	ID=FBgn0024836.1.mrna1;geneID=FBgn0024836.1.path1;Name=FBgn0024836.1;Dir=sensecoverage=100.0;identity=99.8;matches=10763;mismatches=19;indels=0;unknowns=0;locus=RLOC_00017844
Chr2	stalkie_big_nohaplotig	exon	62082149	62082176	100	-	.	Parent=FBgn0024836.1.mrna1;Target=FBgn0024836.1 10755 10782 +
Chr2	stalkie_big_nohaplotig	exon	62083662	62085026	99	-	.	Parent=FBgn0024836.1.mrna1;Target=FBgn0024836.1 9390 10754 +
Chr2	stalkie_big_nohaplotig	exon	62085106	62085645	99	-	.	Parent=FBgn0024836.1.mrna1;Target=FBgn0024836.1 8850 9389 +
Chr2	stalkie_big_nohaplotig	exon	62085753	62092995	99	-	.	Parent=FBgn0024836.1.mrna1;Target=FBgn0024836.1 1607 8849 +
Chr2	stalkie_big_nohaplotig	exon	62093080	62094685	99	-	.	Parent=FBgn0024836.1.mrna1;Target=FBgn0024836.1 1 1606 +
Chr2	stalkie_big_nohaplotig	CDS	62082149	62082176	.	-	1	Parent=FBgn0024836.1.mrna1;Target=FBgn0024836.1 10755 10782 +
Chr2	stalkie_big_nohaplotig	CDS	62083662	62085026	.	-	1	Parent=FBgn0024836.1.mrna1;Target=FBgn0024836.1 9390 10754 +
Chr2	stalkie_big_nohaplotig	CDS	62085106	62085645	.	-	1	Parent=FBgn0024836.1.mrna1;Target=FBgn0024836.1 8850 9389 +
Chr2	stalkie_big_nohaplotig	CDS	62085753	62092995	.	-	2	Parent=FBgn0024836.1.mrna1;Target=FBgn0024836.1 1607 8849 +
Chr2	stalkie_big_nohaplotig	CDS	62093080	62094685	.	-	0	Parent=FBgn0024836.1.mrna1;Target=FBgn0024836.1 1 1606 +
Chr2	gffcl	locus	62143414	62143698	.	-	.	ID=RLOC_00017845;geneIDs=comp118557_c0_seq1.path1;transcripts=comp118557_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62143414	62143698	.	-	.	ID=comp118557_c0_seq1.mrna1;geneID=comp118557_c0_seq1.path1;Name=comp118557_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=285;mismatches=0;indels=0;unknowns=0;Target=comp118557_c0_seq1 285 1 .;CDS_Target=comp118557_c0_seq1 241 2 .;locus=RLOC_00017845
Chr2	stalkie_big_nohaplotig	exon	62143414	62143698	100	-	.	Parent=comp118557_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62143458	62143697	.	-	0	Parent=comp118557_c0_seq1.mrna1
Chr2	gffcl	locus	62228870	62230534	.	-	.	ID=RLOC_00017846;geneIDs=comp162266_c1_seq1.path2;transcripts=comp162266_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	62228870	62230534	.	-	.	ID=comp162266_c1_seq1.mrna2;geneID=comp162266_c1_seq1.path2;Name=comp162266_c1_seq1;Dir=indeterminatecoverage=99.4;identity=99.3;matches=1655;mismatches=9;indels=2;unknowns=0;Target=comp162266_c1_seq1 1675 11 .;CDS_Target=comp162266_c1_seq1 1674 433 .;locus=RLOC_00017846
Chr2	stalkie_big_nohaplotig	exon	62228870	62230534	99	-	.	Parent=comp162266_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	62228871	62230112	.	-	0	Parent=comp162266_c1_seq1.mrna2
Chr2	gffcl	locus	62232709	62234158	.	+	.	ID=RLOC_00017847;geneIDs=comp157739_c3_seq1.path4;transcripts=comp157739_c3_seq1.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	62232709	62234158	.	+	.	ID=comp157739_c3_seq1.mrna4;geneID=comp157739_c3_seq1.path4;Name=comp157739_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1443;mismatches=7;indels=6;unknowns=0;Target=comp157739_c3_seq1 1456 1 .;CDS_Target=comp157739_c3_seq1 1025 852 .;locus=RLOC_00017847
Chr2	stalkie_big_nohaplotig	exon	62232709	62234158	99	+	.	Parent=comp157739_c3_seq1.mrna4
Chr2	stalkie_big_nohaplotig	CDS	62233558	62233730	.	+	0	Parent=comp157739_c3_seq1.mrna4
Chr2	gffcl	locus	62234757	62235163	.	+	.	ID=RLOC_00017848;geneIDs=comp147232_c0_seq1.path10;transcripts=comp147232_c0_seq1.mrna10
Chr2	stalkie_big_nohaplotig	mRNA	62234757	62235163	.	+	.	ID=comp147232_c0_seq1.mrna10;geneID=comp147232_c0_seq1.path10;Name=comp147232_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=400;mismatches=7;indels=6;unknowns=0;Target=comp147232_c0_seq1 413 1 .;CDS_Target=comp147232_c0_seq1 279 136 .;locus=RLOC_00017848
Chr2	stalkie_big_nohaplotig	exon	62234757	62235163	96	+	.	Parent=comp147232_c0_seq1.mrna10
Chr2	stalkie_big_nohaplotig	CDS	62234889	62235029	.	+	0	Parent=comp147232_c0_seq1.mrna10
Chr2	gffcl	locus	62274827	62276252	.	+	.	ID=RLOC_00017850;geneIDs=FBgn0037834.2.path1;transcripts=FBgn0037834.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62274827	62276252	.	+	.	ID=FBgn0037834.2.mrna1;geneID=FBgn0037834.2.path1;Name=FBgn0037834.2;Dir=sensecoverage=98.4;identity=99.3;matches=1061;mismatches=8;indels=0;unknowns=0;locus=RLOC_00017850
Chr2	stalkie_big_nohaplotig	exon	62274827	62275052	98	+	.	Parent=FBgn0037834.2.mrna1;Target=FBgn0037834.2 18 243 +
Chr2	stalkie_big_nohaplotig	exon	62275116	62275339	99	+	.	Parent=FBgn0037834.2.mrna1;Target=FBgn0037834.2 244 467 +
Chr2	stalkie_big_nohaplotig	exon	62275634	62276252	99	+	.	Parent=FBgn0037834.2.mrna1;Target=FBgn0037834.2 468 1086 +
Chr2	stalkie_big_nohaplotig	CDS	62274828	62275052	.	+	0	Parent=FBgn0037834.2.mrna1;Target=FBgn0037834.2 19 243 +
Chr2	stalkie_big_nohaplotig	CDS	62275116	62275339	.	+	0	Parent=FBgn0037834.2.mrna1;Target=FBgn0037834.2 244 467 +
Chr2	stalkie_big_nohaplotig	CDS	62275634	62276252	.	+	1	Parent=FBgn0037834.2.mrna1;Target=FBgn0037834.2 468 1086 +
Chr2	gffcl	locus	62280540	62316793	.	-	.	ID=RLOC_00017851;geneIDs=ORF36.path1;transcripts=ORF36.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62280540	62316793	.	-	.	ID=ORF36.mrna1;geneID=ORF36.path1;Name=ORF36;Dir=sensecoverage=100.0;identity=99.2;matches=3689;mismatches=31;indels=0;unknowns=0;locus=RLOC_00017851
Chr2	stalkie_big_nohaplotig	exon	62280540	62280739	99	-	.	Parent=ORF36.mrna1;Target=ORF36 3521 3720 +
Chr2	stalkie_big_nohaplotig	exon	62280807	62281006	100	-	.	Parent=ORF36.mrna1;Target=ORF36 3321 3520 +
Chr2	stalkie_big_nohaplotig	exon	62281078	62281643	98	-	.	Parent=ORF36.mrna1;Target=ORF36 2755 3320 +
Chr2	stalkie_big_nohaplotig	exon	62281709	62282959	99	-	.	Parent=ORF36.mrna1;Target=ORF36 1504 2754 +
Chr2	stalkie_big_nohaplotig	exon	62310749	62310829	97	-	.	Parent=ORF36.mrna1;Target=ORF36 1423 1503 +
Chr2	stalkie_big_nohaplotig	exon	62310892	62311002	100	-	.	Parent=ORF36.mrna1;Target=ORF36 1312 1422 +
Chr2	stalkie_big_nohaplotig	exon	62311059	62311154	100	-	.	Parent=ORF36.mrna1;Target=ORF36 1216 1311 +
Chr2	stalkie_big_nohaplotig	exon	62311221	62311325	99	-	.	Parent=ORF36.mrna1;Target=ORF36 1111 1215 +
Chr2	stalkie_big_nohaplotig	exon	62311387	62311473	100	-	.	Parent=ORF36.mrna1;Target=ORF36 1024 1110 +
Chr2	stalkie_big_nohaplotig	exon	62311540	62311620	97	-	.	Parent=ORF36.mrna1;Target=ORF36 943 1023 +
Chr2	stalkie_big_nohaplotig	exon	62312450	62312560	98	-	.	Parent=ORF36.mrna1;Target=ORF36 832 942 +
Chr2	stalkie_big_nohaplotig	exon	62312617	62312712	97	-	.	Parent=ORF36.mrna1;Target=ORF36 736 831 +
Chr2	stalkie_big_nohaplotig	exon	62312779	62312859	97	-	.	Parent=ORF36.mrna1;Target=ORF36 655 735 +
Chr2	stalkie_big_nohaplotig	exon	62312916	62313092	98	-	.	Parent=ORF36.mrna1;Target=ORF36 478 654 +
Chr2	stalkie_big_nohaplotig	exon	62313151	62313252	99	-	.	Parent=ORF36.mrna1;Target=ORF36 376 477 +
Chr2	stalkie_big_nohaplotig	exon	62313313	62313387	100	-	.	Parent=ORF36.mrna1;Target=ORF36 301 375 +
Chr2	stalkie_big_nohaplotig	exon	62316387	62316524	99	-	.	Parent=ORF36.mrna1;Target=ORF36 163 300 +
Chr2	stalkie_big_nohaplotig	exon	62316574	62316678	100	-	.	Parent=ORF36.mrna1;Target=ORF36 58 162 +
Chr2	stalkie_big_nohaplotig	exon	62316737	62316793	100	-	.	Parent=ORF36.mrna1;Target=ORF36 1 57 +
Chr2	stalkie_big_nohaplotig	CDS	62280540	62280739	.	-	2	Parent=ORF36.mrna1;Target=ORF36 3521 3720 +
Chr2	stalkie_big_nohaplotig	CDS	62280807	62281006	.	-	1	Parent=ORF36.mrna1;Target=ORF36 3321 3520 +
Chr2	stalkie_big_nohaplotig	CDS	62281078	62281643	.	-	0	Parent=ORF36.mrna1;Target=ORF36 2755 3320 +
Chr2	stalkie_big_nohaplotig	CDS	62281709	62282959	.	-	0	Parent=ORF36.mrna1;Target=ORF36 1504 2754 +
Chr2	stalkie_big_nohaplotig	CDS	62310749	62310829	.	-	0	Parent=ORF36.mrna1;Target=ORF36 1423 1503 +
Chr2	stalkie_big_nohaplotig	CDS	62310892	62311002	.	-	0	Parent=ORF36.mrna1;Target=ORF36 1312 1422 +
Chr2	stalkie_big_nohaplotig	CDS	62311059	62311154	.	-	0	Parent=ORF36.mrna1;Target=ORF36 1216 1311 +
Chr2	stalkie_big_nohaplotig	CDS	62311221	62311325	.	-	0	Parent=ORF36.mrna1;Target=ORF36 1111 1215 +
Chr2	stalkie_big_nohaplotig	CDS	62311387	62311473	.	-	0	Parent=ORF36.mrna1;Target=ORF36 1024 1110 +
Chr2	stalkie_big_nohaplotig	CDS	62311540	62311620	.	-	0	Parent=ORF36.mrna1;Target=ORF36 943 1023 +
Chr2	stalkie_big_nohaplotig	CDS	62312450	62312560	.	-	0	Parent=ORF36.mrna1;Target=ORF36 832 942 +
Chr2	stalkie_big_nohaplotig	CDS	62312617	62312712	.	-	0	Parent=ORF36.mrna1;Target=ORF36 736 831 +
Chr2	stalkie_big_nohaplotig	CDS	62312779	62312859	.	-	0	Parent=ORF36.mrna1;Target=ORF36 655 735 +
Chr2	stalkie_big_nohaplotig	CDS	62312916	62313092	.	-	0	Parent=ORF36.mrna1;Target=ORF36 478 654 +
Chr2	stalkie_big_nohaplotig	CDS	62313151	62313252	.	-	0	Parent=ORF36.mrna1;Target=ORF36 376 477 +
Chr2	stalkie_big_nohaplotig	CDS	62313313	62313387	.	-	0	Parent=ORF36.mrna1;Target=ORF36 301 375 +
Chr2	stalkie_big_nohaplotig	CDS	62316387	62316524	.	-	0	Parent=ORF36.mrna1;Target=ORF36 163 300 +
Chr2	stalkie_big_nohaplotig	CDS	62316574	62316678	.	-	0	Parent=ORF36.mrna1;Target=ORF36 58 162 +
Chr2	stalkie_big_nohaplotig	CDS	62316737	62316793	.	-	0	Parent=ORF36.mrna1;Target=ORF36 1 57 +
Chr2	gffcl	locus	62342247	62343405	.	+	.	ID=RLOC_00017852;geneIDs=comp117135_c0_seq1.path1;transcripts=comp117135_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62342247	62343405	.	+	.	ID=comp117135_c0_seq1.mrna1;geneID=comp117135_c0_seq1.path1;Name=comp117135_c0_seq1;Dir=sensecoverage=94.4;identity=99.4;matches=333;mismatches=2;indels=0;unknowns=0;Target=comp117135_c0_seq1 1 141 +;locus=RLOC_00017852
Chr2	stalkie_big_nohaplotig	exon	62342247	62342426	98	+	.	Parent=comp117135_c0_seq1.mrna1;Target=comp117135_c0_seq1 1 180 +
Chr2	stalkie_big_nohaplotig	exon	62343251	62343405	100	+	.	Parent=comp117135_c0_seq1.mrna1;Target=comp117135_c0_seq1 181 335 +
Chr2	stalkie_big_nohaplotig	CDS	62342247	62342387	.	+	0	Parent=comp117135_c0_seq1.mrna1
Chr2	gffcl	locus	62373130	62374006	.	-	.	ID=RLOC_00017853;geneIDs=comp161075_c0_seq1.path1;transcripts=comp161075_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62373130	62374006	.	-	.	ID=comp161075_c0_seq1.mrna1;geneID=comp161075_c0_seq1.path1;Name=comp161075_c0_seq1;Dir=indeterminatecoverage=96.9;identity=99.4;matches=873;mismatches=4;indels=1;unknowns=0;Target=comp161075_c0_seq1 888 11 .;CDS_Target=comp161075_c0_seq1 386 222 .;locus=RLOC_00017853
Chr2	stalkie_big_nohaplotig	exon	62373130	62374006	99	-	.	Parent=comp161075_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62373632	62373796	.	-	0	Parent=comp161075_c0_seq1.mrna1
Chr2	gffcl	locus	62376947	62379265	.	+	.	ID=RLOC_00017854;geneIDs=FBgn0051040.1.path1;transcripts=FBgn0051040.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62376947	62379265	.	+	.	ID=FBgn0051040.1.mrna1;geneID=FBgn0051040.1.path1;Name=FBgn0051040.1;Dir=sensecoverage=100.0;identity=99.6;matches=2254;mismatches=8;indels=0;unknowns=0;locus=RLOC_00017854
Chr2	stalkie_big_nohaplotig	exon	62376947	62377417	99	+	.	Parent=FBgn0051040.1.mrna1;Target=FBgn0051040.1 1 471 +
Chr2	stalkie_big_nohaplotig	exon	62377475	62379265	99	+	.	Parent=FBgn0051040.1.mrna1;Target=FBgn0051040.1 472 2262 +
Chr2	stalkie_big_nohaplotig	CDS	62376947	62377417	.	+	0	Parent=FBgn0051040.1.mrna1;Target=FBgn0051040.1 1 471 +
Chr2	stalkie_big_nohaplotig	CDS	62377475	62379265	.	+	0	Parent=FBgn0051040.1.mrna1;Target=FBgn0051040.1 472 2262 +
Chr2	gffcl	locus	62406922	62417914	.	+	.	ID=RLOC_00017855;geneIDs=FBgn0033538.1.path1;transcripts=FBgn0033538.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62406922	62417914	.	+	.	ID=FBgn0033538.1.mrna1;geneID=FBgn0033538.1.path1;Name=FBgn0033538.1;Dir=sensecoverage=100.0;identity=99.6;matches=2217;mismatches=9;indels=0;unknowns=0;locus=RLOC_00017855
Chr2	stalkie_big_nohaplotig	exon	62406922	62406944	100	+	.	Parent=FBgn0033538.1.mrna1;Target=FBgn0033538.1 1 23 +
Chr2	stalkie_big_nohaplotig	exon	62414591	62414729	100	+	.	Parent=FBgn0033538.1.mrna1;Target=FBgn0033538.1 24 162 +
Chr2	stalkie_big_nohaplotig	exon	62415141	62415621	99	+	.	Parent=FBgn0033538.1.mrna1;Target=FBgn0033538.1 163 643 +
Chr2	stalkie_big_nohaplotig	exon	62415687	62415773	100	+	.	Parent=FBgn0033538.1.mrna1;Target=FBgn0033538.1 644 730 +
Chr2	stalkie_big_nohaplotig	exon	62415833	62416399	99	+	.	Parent=FBgn0033538.1.mrna1;Target=FBgn0033538.1 731 1297 +
Chr2	stalkie_big_nohaplotig	exon	62416462	62416796	99	+	.	Parent=FBgn0033538.1.mrna1;Target=FBgn0033538.1 1298 1632 +
Chr2	stalkie_big_nohaplotig	exon	62416851	62417030	100	+	.	Parent=FBgn0033538.1.mrna1;Target=FBgn0033538.1 1633 1812 +
Chr2	stalkie_big_nohaplotig	exon	62417156	62417401	100	+	.	Parent=FBgn0033538.1.mrna1;Target=FBgn0033538.1 1813 2058 +
Chr2	stalkie_big_nohaplotig	exon	62417466	62417561	98	+	.	Parent=FBgn0033538.1.mrna1;Target=FBgn0033538.1 2059 2154 +
Chr2	stalkie_big_nohaplotig	exon	62417843	62417914	100	+	.	Parent=FBgn0033538.1.mrna1;Target=FBgn0033538.1 2155 2226 +
Chr2	stalkie_big_nohaplotig	CDS	62406922	62406944	.	+	0	Parent=FBgn0033538.1.mrna1;Target=FBgn0033538.1 1 23 +
Chr2	stalkie_big_nohaplotig	CDS	62414591	62414729	.	+	1	Parent=FBgn0033538.1.mrna1;Target=FBgn0033538.1 24 162 +
Chr2	stalkie_big_nohaplotig	CDS	62415141	62415621	.	+	0	Parent=FBgn0033538.1.mrna1;Target=FBgn0033538.1 163 643 +
Chr2	stalkie_big_nohaplotig	CDS	62415687	62415773	.	+	2	Parent=FBgn0033538.1.mrna1;Target=FBgn0033538.1 644 730 +
Chr2	stalkie_big_nohaplotig	CDS	62415833	62416399	.	+	2	Parent=FBgn0033538.1.mrna1;Target=FBgn0033538.1 731 1297 +
Chr2	stalkie_big_nohaplotig	CDS	62416462	62416796	.	+	2	Parent=FBgn0033538.1.mrna1;Target=FBgn0033538.1 1298 1632 +
Chr2	stalkie_big_nohaplotig	CDS	62416851	62417030	.	+	0	Parent=FBgn0033538.1.mrna1;Target=FBgn0033538.1 1633 1812 +
Chr2	stalkie_big_nohaplotig	CDS	62417156	62417401	.	+	0	Parent=FBgn0033538.1.mrna1;Target=FBgn0033538.1 1813 2058 +
Chr2	stalkie_big_nohaplotig	CDS	62417466	62417561	.	+	0	Parent=FBgn0033538.1.mrna1;Target=FBgn0033538.1 2059 2154 +
Chr2	stalkie_big_nohaplotig	CDS	62417843	62417914	.	+	0	Parent=FBgn0033538.1.mrna1;Target=FBgn0033538.1 2155 2226 +
Chr2	gffcl	locus	62418171	62419036	.	-	.	ID=RLOC_00017856;geneIDs=comp143842_c0_seq1.path1;transcripts=comp143842_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62418171	62419036	.	-	.	ID=comp143842_c0_seq1.mrna1;geneID=comp143842_c0_seq1.path1;Name=comp143842_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=864;mismatches=2;indels=4;unknowns=0;Target=comp143842_c0_seq1 870 1 .;CDS_Target=comp143842_c0_seq1 653 528 .;locus=RLOC_00017856
Chr2	stalkie_big_nohaplotig	exon	62418171	62419036	99	-	.	Parent=comp143842_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62418388	62418513	.	-	0	Parent=comp143842_c0_seq1.mrna1
Chr2	gffcl	locus	62423896	62429454	.	-	.	ID=RLOC_00017857;geneIDs=FBgn0033539.1.path1;transcripts=FBgn0033539.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62423896	62429454	.	-	.	ID=FBgn0033539.1.mrna1;geneID=FBgn0033539.1.path1;Name=FBgn0033539.1;Dir=sensecoverage=100.0;identity=99.6;matches=2178;mismatches=9;indels=0;unknowns=0;locus=RLOC_00017857
Chr2	stalkie_big_nohaplotig	exon	62423896	62424093	100	-	.	Parent=FBgn0033539.1.mrna1;Target=FBgn0033539.1 1990 2187 +
Chr2	stalkie_big_nohaplotig	exon	62424158	62424563	98	-	.	Parent=FBgn0033539.1.mrna1;Target=FBgn0033539.1 1584 1989 +
Chr2	stalkie_big_nohaplotig	exon	62424760	62424947	100	-	.	Parent=FBgn0033539.1.mrna1;Target=FBgn0033539.1 1396 1583 +
Chr2	stalkie_big_nohaplotig	exon	62427802	62428059	98	-	.	Parent=FBgn0033539.1.mrna1;Target=FBgn0033539.1 1138 1395 +
Chr2	stalkie_big_nohaplotig	exon	62428121	62428206	98	-	.	Parent=FBgn0033539.1.mrna1;Target=FBgn0033539.1 1052 1137 +
Chr2	stalkie_big_nohaplotig	exon	62428286	62428442	100	-	.	Parent=FBgn0033539.1.mrna1;Target=FBgn0033539.1 895 1051 +
Chr2	stalkie_big_nohaplotig	exon	62428502	62429205	100	-	.	Parent=FBgn0033539.1.mrna1;Target=FBgn0033539.1 191 894 +
Chr2	stalkie_big_nohaplotig	exon	62429265	62429454	100	-	.	Parent=FBgn0033539.1.mrna1;Target=FBgn0033539.1 1 190 +
Chr2	stalkie_big_nohaplotig	CDS	62423896	62424093	.	-	0	Parent=FBgn0033539.1.mrna1;Target=FBgn0033539.1 1990 2187 +
Chr2	stalkie_big_nohaplotig	CDS	62424158	62424563	.	-	1	Parent=FBgn0033539.1.mrna1;Target=FBgn0033539.1 1584 1989 +
Chr2	stalkie_big_nohaplotig	CDS	62424760	62424947	.	-	0	Parent=FBgn0033539.1.mrna1;Target=FBgn0033539.1 1396 1583 +
Chr2	stalkie_big_nohaplotig	CDS	62427802	62428059	.	-	0	Parent=FBgn0033539.1.mrna1;Target=FBgn0033539.1 1138 1395 +
Chr2	stalkie_big_nohaplotig	CDS	62428121	62428206	.	-	2	Parent=FBgn0033539.1.mrna1;Target=FBgn0033539.1 1052 1137 +
Chr2	stalkie_big_nohaplotig	CDS	62428286	62428442	.	-	0	Parent=FBgn0033539.1.mrna1;Target=FBgn0033539.1 895 1051 +
Chr2	stalkie_big_nohaplotig	CDS	62428502	62429205	.	-	2	Parent=FBgn0033539.1.mrna1;Target=FBgn0033539.1 191 894 +
Chr2	stalkie_big_nohaplotig	CDS	62429265	62429454	.	-	0	Parent=FBgn0033539.1.mrna1;Target=FBgn0033539.1 1 190 +
Chr2	gffcl	locus	62433109	62435890	.	-	.	ID=RLOC_00017858;geneIDs=FBgn0033540.1.path1;transcripts=FBgn0033540.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62433109	62435890	.	-	.	ID=FBgn0033540.1.mrna1;geneID=FBgn0033540.1.path1;Name=FBgn0033540.1;Dir=sensecoverage=100.0;identity=98.8;matches=2452;mismatches=29;indels=0;unknowns=0;locus=RLOC_00017858
Chr2	stalkie_big_nohaplotig	exon	62433109	62433238	96	-	.	Parent=FBgn0033540.1.mrna1;Target=FBgn0033540.1 2352 2481 +
Chr2	stalkie_big_nohaplotig	exon	62433307	62433819	99	-	.	Parent=FBgn0033540.1.mrna1;Target=FBgn0033540.1 1839 2351 +
Chr2	stalkie_big_nohaplotig	exon	62433878	62434178	98	-	.	Parent=FBgn0033540.1.mrna1;Target=FBgn0033540.1 1538 1838 +
Chr2	stalkie_big_nohaplotig	exon	62434244	62434807	99	-	.	Parent=FBgn0033540.1.mrna1;Target=FBgn0033540.1 974 1537 +
Chr2	stalkie_big_nohaplotig	exon	62434863	62435655	98	-	.	Parent=FBgn0033540.1.mrna1;Target=FBgn0033540.1 181 973 +
Chr2	stalkie_big_nohaplotig	exon	62435711	62435890	98	-	.	Parent=FBgn0033540.1.mrna1;Target=FBgn0033540.1 1 180 +
Chr2	stalkie_big_nohaplotig	CDS	62433109	62433238	.	-	1	Parent=FBgn0033540.1.mrna1;Target=FBgn0033540.1 2352 2481 +
Chr2	stalkie_big_nohaplotig	CDS	62433307	62433819	.	-	1	Parent=FBgn0033540.1.mrna1;Target=FBgn0033540.1 1839 2351 +
Chr2	stalkie_big_nohaplotig	CDS	62433878	62434178	.	-	2	Parent=FBgn0033540.1.mrna1;Target=FBgn0033540.1 1538 1838 +
Chr2	stalkie_big_nohaplotig	CDS	62434244	62434807	.	-	2	Parent=FBgn0033540.1.mrna1;Target=FBgn0033540.1 974 1537 +
Chr2	stalkie_big_nohaplotig	CDS	62434863	62435655	.	-	0	Parent=FBgn0033540.1.mrna1;Target=FBgn0033540.1 181 973 +
Chr2	stalkie_big_nohaplotig	CDS	62435711	62435890	.	-	0	Parent=FBgn0033540.1.mrna1;Target=FBgn0033540.1 1 180 +
Chr2	gffcl	locus	62437269	62438290	.	+	.	ID=RLOC_00017859;geneIDs=comp154661_c0_seq1.path1;transcripts=comp154661_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62437269	62438290	.	+	.	ID=comp154661_c0_seq1.mrna1;geneID=comp154661_c0_seq1.path1;Name=comp154661_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.4;matches=1016;mismatches=6;indels=0;unknowns=0;Target=comp154661_c0_seq1 1022 1 .;CDS_Target=comp154661_c0_seq1 944 294 .;locus=RLOC_00017859
Chr2	stalkie_big_nohaplotig	exon	62437269	62438290	99	+	.	Parent=comp154661_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62437562	62438212	.	+	0	Parent=comp154661_c0_seq1.mrna1
Chr2	gffcl	locus	62483394	62484470	.	-	.	ID=RLOC_00017860;geneIDs=comp155668_c0_seq1.path1;transcripts=comp155668_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62483394	62484470	.	-	.	ID=comp155668_c0_seq1.mrna1;geneID=comp155668_c0_seq1.path1;Name=comp155668_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.3;matches=1050;mismatches=7;indels=22;unknowns=0;Target=comp155668_c0_seq1 1061 3 .;CDS_Target=comp155668_c0_seq1 508 200 .;locus=RLOC_00017860
Chr2	stalkie_big_nohaplotig	exon	62483394	62484470	97	-	.	Parent=comp155668_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62483945	62484253	.	-	0	Parent=comp155668_c0_seq1.mrna1
Chr2	gffcl	locus	62529056	62531639	.	+	.	ID=RLOC_00017861;geneIDs=comp154034_c0_seq1.path1;transcripts=comp154034_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62529056	62531639	.	+	.	ID=comp154034_c0_seq1.mrna1;geneID=comp154034_c0_seq1.path1;Name=comp154034_c0_seq1;Dir=antisensecoverage=99.9;identity=98.3;matches=587;mismatches=10;indels=0;unknowns=0;Target=comp154034_c0_seq1 343 531 .;locus=RLOC_00017861
Chr2	stalkie_big_nohaplotig	exon	62529056	62529562	98	+	.	Parent=comp154034_c0_seq1.mrna1;Target=comp154034_c0_seq1 162 668 -
Chr2	stalkie_big_nohaplotig	exon	62531051	62531100	98	+	.	Parent=comp154034_c0_seq1.mrna1;Target=comp154034_c0_seq1 112 161 -
Chr2	stalkie_big_nohaplotig	exon	62531600	62531639	100	+	.	Parent=comp154034_c0_seq1.mrna1;Target=comp154034_c0_seq1 1 40 -
Chr2	stalkie_big_nohaplotig	CDS	62529193	62529381	.	+	0	Parent=comp154034_c0_seq1.mrna1
Chr2	gffcl	locus	62544355	62632733	.	.	.	ID=RLOC_00017862;geneIDs=comp149445_c1_seq1.path1,comp179003_c1_seq1.path1;transcripts=comp179003_c1_seq1.mrna1,comp149445_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62544355	62632733	.	+	.	ID=comp179003_c1_seq1.mrna1;geneID=comp179003_c1_seq1.path1;Name=comp179003_c1_seq1;Dir=indeterminatecoverage=71.5;identity=95.6;matches=549;mismatches=17;indels=8;unknowns=0;locus=RLOC_00017862
Chr2	stalkie_big_nohaplotig	exon	62544355	62544362	100	+	.	Parent=comp179003_c1_seq1.mrna1;Target=comp179003_c1_seq1 252 245 .
Chr2	stalkie_big_nohaplotig	exon	62548545	62548552	100	+	.	Parent=comp179003_c1_seq1.mrna1;Target=comp179003_c1_seq1 260 253 .
Chr2	stalkie_big_nohaplotig	exon	62556641	62556642	100	+	.	Parent=comp179003_c1_seq1.mrna1;Target=comp179003_c1_seq1 262 261 .
Chr2	stalkie_big_nohaplotig	exon	62556650	62556656	100	+	.	Parent=comp179003_c1_seq1.mrna1;Target=comp179003_c1_seq1 313 307 .
Chr2	stalkie_big_nohaplotig	exon	62560052	62560064	100	+	.	Parent=comp179003_c1_seq1.mrna1;Target=comp179003_c1_seq1 326 314 .
Chr2	stalkie_big_nohaplotig	exon	62566748	62566750	100	+	.	Parent=comp179003_c1_seq1.mrna1;Target=comp179003_c1_seq1 329 327 .
Chr2	stalkie_big_nohaplotig	exon	62571821	62571827	100	+	.	Parent=comp179003_c1_seq1.mrna1;Target=comp179003_c1_seq1 336 330 .
Chr2	stalkie_big_nohaplotig	exon	62583250	62583260	100	+	.	Parent=comp179003_c1_seq1.mrna1;Target=comp179003_c1_seq1 347 337 .
Chr2	stalkie_big_nohaplotig	exon	62587744	62587748	100	+	.	Parent=comp179003_c1_seq1.mrna1;Target=comp179003_c1_seq1 352 348 .
Chr2	stalkie_big_nohaplotig	exon	62587913	62587917	100	+	.	Parent=comp179003_c1_seq1.mrna1;Target=comp179003_c1_seq1 357 353 .
Chr2	stalkie_big_nohaplotig	exon	62600913	62600920	100	+	.	Parent=comp179003_c1_seq1.mrna1;Target=comp179003_c1_seq1 365 358 .
Chr2	stalkie_big_nohaplotig	exon	62616687	62616727	48	+	.	Parent=comp179003_c1_seq1.mrna1;Target=comp179003_c1_seq1 414 366 .
Chr2	stalkie_big_nohaplotig	exon	62619181	62619186	100	+	.	Parent=comp179003_c1_seq1.mrna1;Target=comp179003_c1_seq1 420 415 .
Chr2	stalkie_big_nohaplotig	exon	62624195	62624197	100	+	.	Parent=comp179003_c1_seq1.mrna1;Target=comp179003_c1_seq1 423 421 .
Chr2	stalkie_big_nohaplotig	exon	62632295	62632733	100	+	.	Parent=comp179003_c1_seq1.mrna1;Target=comp179003_c1_seq1 862 424 .
Chr2	stalkie_big_nohaplotig	CDS	62544356	62544362	.	+	0	Parent=comp179003_c1_seq1.mrna1;Target=comp179003_c1_seq1 252 246 .
Chr2	stalkie_big_nohaplotig	CDS	62548545	62548552	.	+	2	Parent=comp179003_c1_seq1.mrna1;Target=comp179003_c1_seq1 260 253 .
Chr2	stalkie_big_nohaplotig	CDS	62556641	62556642	.	+	0	Parent=comp179003_c1_seq1.mrna1;Target=comp179003_c1_seq1 262 261 .
Chr2	stalkie_big_nohaplotig	CDS	62556650	62556656	.	+	1	Parent=comp179003_c1_seq1.mrna1;Target=comp179003_c1_seq1 313 307 .
Chr2	stalkie_big_nohaplotig	CDS	62560052	62560064	.	+	0	Parent=comp179003_c1_seq1.mrna1;Target=comp179003_c1_seq1 326 314 .
Chr2	stalkie_big_nohaplotig	CDS	62566748	62566750	.	+	2	Parent=comp179003_c1_seq1.mrna1;Target=comp179003_c1_seq1 329 327 .
Chr2	stalkie_big_nohaplotig	mRNA	62571579	62572024	.	-	.	ID=comp149445_c1_seq1.mrna1;geneID=comp149445_c1_seq1.path1;Name=comp149445_c1_seq1;Dir=indeterminatecoverage=100.0;identity=91.0;matches=436;mismatches=9;indels=34;unknowns=0;Target=comp149445_c1_seq1 478 1 .;CDS_Target=comp149445_c1_seq1 240 94 .;locus=RLOC_00017862
Chr2	stalkie_big_nohaplotig	exon	62571579	62572024	91	-	.	Parent=comp149445_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62571792	62571931	.	-	0	Parent=comp149445_c1_seq1.mrna1
Chr2	gffcl	locus	62559809	62560511	.	-	.	ID=RLOC_00017863;geneIDs=comp147916_c0_seq1.path1;transcripts=comp147916_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62559809	62560511	.	-	.	ID=comp147916_c0_seq1.mrna1;geneID=comp147916_c0_seq1.path1;Name=comp147916_c0_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=629;mismatches=4;indels=0;unknowns=0;Target=comp147916_c0_seq1 100 483 +;locus=RLOC_00017863
Chr2	stalkie_big_nohaplotig	exon	62559809	62560386	99	-	.	Parent=comp147916_c0_seq1.mrna1;Target=comp147916_c0_seq1 56 633 +
Chr2	stalkie_big_nohaplotig	exon	62560457	62560511	96	-	.	Parent=comp147916_c0_seq1.mrna1;Target=comp147916_c0_seq1 1 55 +
Chr2	stalkie_big_nohaplotig	CDS	62559959	62560342	.	-	0	Parent=comp147916_c0_seq1.mrna1
Chr2	gffcl	locus	62579148	62579607	.	-	.	ID=RLOC_00017864;geneIDs=comp156506_c0_seq1.path1;transcripts=comp156506_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62579148	62579607	.	-	.	ID=comp156506_c0_seq1.mrna1;geneID=comp156506_c0_seq1.path1;Name=comp156506_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=459;mismatches=0;indels=1;unknowns=0;Target=comp156506_c0_seq1 460 2 .;CDS_Target=comp156506_c0_seq1 119 3 .;locus=RLOC_00017864
Chr2	stalkie_big_nohaplotig	exon	62579148	62579607	99	-	.	Parent=comp156506_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62579490	62579606	.	-	0	Parent=comp156506_c0_seq1.mrna1
Chr2	gffcl	locus	62591008	62594291	.	-	.	ID=RLOC_00017865;geneIDs=FBgn0036752.2.path1,FBgn0036752.3.path1;transcripts=FBgn0036752.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62591027	62594291	.	-	.	ID=FBgn0036752.2.mrna1;geneID=FBgn0036752.2.path1;Name=FBgn0036752.2;Dir=sensecoverage=96.3;identity=98.4;matches=1546;mismatches=25;indels=0;unknowns=0;locus=RLOC_00017865
Chr2	stalkie_big_nohaplotig	exon	62591027	62591598	96	-	.	Parent=FBgn0036752.2.mrna1;Target=FBgn0036752.2 1000 1571 +
Chr2	stalkie_big_nohaplotig	exon	62592605	62592787	100	-	.	Parent=FBgn0036752.2.mrna1;Target=FBgn0036752.2 817 999 +
Chr2	stalkie_big_nohaplotig	exon	62592856	62593569	99	-	.	Parent=FBgn0036752.2.mrna1;Target=FBgn0036752.2 103 816 +
Chr2	stalkie_big_nohaplotig	exon	62594190	62594291	98	-	.	Parent=FBgn0036752.2.mrna1;Target=FBgn0036752.2 1 102 +
Chr2	stalkie_big_nohaplotig	CDS	62591029	62591598	.	-	0	Parent=FBgn0036752.2.mrna1;Target=FBgn0036752.2 1000 1569 +
Chr2	stalkie_big_nohaplotig	CDS	62592605	62592787	.	-	0	Parent=FBgn0036752.2.mrna1;Target=FBgn0036752.2 817 999 +
Chr2	stalkie_big_nohaplotig	CDS	62592856	62593569	.	-	0	Parent=FBgn0036752.2.mrna1;Target=FBgn0036752.2 103 816 +
Chr2	stalkie_big_nohaplotig	CDS	62594190	62594291	.	-	0	Parent=FBgn0036752.2.mrna1;Target=FBgn0036752.2 1 102 +
Chr2	gffcl	locus	62599157	62599566	.	+	.	ID=RLOC_00017867;geneIDs=comp137717_c2_seq1.path1;transcripts=comp137717_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62599157	62599566	.	+	.	ID=comp137717_c2_seq1.mrna1;geneID=comp137717_c2_seq1.path1;Name=comp137717_c2_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=400;mismatches=10;indels=0;unknowns=0;Target=comp137717_c2_seq1 410 1 .;CDS_Target=comp137717_c2_seq1 247 137 .;locus=RLOC_00017867
Chr2	stalkie_big_nohaplotig	exon	62599157	62599566	97	+	.	Parent=comp137717_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62599293	62599403	.	+	0	Parent=comp137717_c2_seq1.mrna1
Chr2	gffcl	locus	62610920	62612694	.	+	.	ID=RLOC_00017868;geneIDs=comp163453_c1_seq1.path1;transcripts=comp163453_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62610920	62612694	.	+	.	ID=comp163453_c1_seq1.mrna1;geneID=comp163453_c1_seq1.path1;Name=comp163453_c1_seq1;Dir=indeterminatecoverage=99.7;identity=97.7;matches=1761;mismatches=8;indels=34;unknowns=0;Target=comp163453_c1_seq1 1803 7 .;CDS_Target=comp163453_c1_seq1 1389 1153 .;locus=RLOC_00017868
Chr2	stalkie_big_nohaplotig	exon	62610920	62612694	97	+	.	Parent=comp163453_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62612039	62612275	.	+	0	Parent=comp163453_c1_seq1.mrna1
Chr2	gffcl	locus	62615692	62616392	.	-	.	ID=RLOC_00017869;geneIDs=comp145066_c0_seq1.path1;transcripts=comp145066_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62615692	62616392	.	-	.	ID=comp145066_c0_seq1.mrna1;geneID=comp145066_c0_seq1.path1;Name=comp145066_c0_seq1;Dir=indeterminatecoverage=93.6;identity=99.6;matches=701;mismatches=0;indels=3;unknowns=0;Target=comp145066_c0_seq1 715 12 .;CDS_Target=comp145066_c0_seq1 633 466 .;locus=RLOC_00017869
Chr2	stalkie_big_nohaplotig	exon	62615692	62616392	99	-	.	Parent=comp145066_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62615774	62615941	.	-	0	Parent=comp145066_c0_seq1.mrna1
Chr2	gffcl	locus	62628989	62631476	.	-	.	ID=RLOC_00017870;geneIDs=comp159958_c0_seq1.path1;transcripts=comp159958_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62628989	62631476	.	-	.	ID=comp159958_c0_seq1.mrna1;geneID=comp159958_c0_seq1.path1;Name=comp159958_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.2;matches=2468;mismatches=3;indels=18;unknowns=0;Target=comp159958_c0_seq1 2472 1 .;CDS_Target=comp159958_c0_seq1 1941 1780 .;locus=RLOC_00017870
Chr2	stalkie_big_nohaplotig	exon	62628989	62631476	99	-	.	Parent=comp159958_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62629537	62629698	.	-	0	Parent=comp159958_c0_seq1.mrna1
Chr2	gffcl	locus	62636130	62636479	.	-	.	ID=RLOC_00017871;geneIDs=comp134956_c0_seq1.path1;transcripts=comp134956_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62636130	62636479	.	-	.	ID=comp134956_c0_seq1.mrna1;geneID=comp134956_c0_seq1.path1;Name=comp134956_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=350;mismatches=0;indels=1;unknowns=0;Target=comp134956_c0_seq1 351 1 .;CDS_Target=comp134956_c0_seq1 78 1 .;locus=RLOC_00017871
Chr2	stalkie_big_nohaplotig	exon	62636130	62636479	99	-	.	Parent=comp134956_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62636403	62636479	.	-	0	Parent=comp134956_c0_seq1.mrna1
Chr2	gffcl	locus	62638485	62639077	.	+	.	ID=RLOC_00017872;geneIDs=comp147176_c0_seq1.path1;transcripts=comp147176_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62638485	62639077	.	+	.	ID=comp147176_c0_seq1.mrna1;geneID=comp147176_c0_seq1.path1;Name=comp147176_c0_seq1;Dir=indeterminatecoverage=97.2;identity=98.7;matches=585;mismatches=7;indels=1;unknowns=0;Target=comp147176_c0_seq1 592 1 .;CDS_Target=comp147176_c0_seq1 83 3 .;locus=RLOC_00017872
Chr2	stalkie_big_nohaplotig	exon	62638485	62639077	98	+	.	Parent=comp147176_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62638487	62638567	.	+	0	Parent=comp147176_c0_seq1.mrna1
Chr2	gffcl	locus	62639187	62639795	.	+	.	ID=RLOC_00017873;geneIDs=comp138018_c0_seq1.path1;transcripts=comp138018_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62639187	62639795	.	+	.	ID=comp138018_c0_seq1.mrna1;geneID=comp138018_c0_seq1.path1;Name=comp138018_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=609;mismatches=0;indels=0;unknowns=0;Target=comp138018_c0_seq1 609 1 .;CDS_Target=comp138018_c0_seq1 471 415 .;locus=RLOC_00017873
Chr2	stalkie_big_nohaplotig	exon	62639187	62639795	100	+	.	Parent=comp138018_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62639601	62639657	.	+	0	Parent=comp138018_c0_seq1.mrna1
Chr2	gffcl	locus	62640685	62644691	.	+	.	ID=RLOC_00017874;geneIDs=comp149097_c1_seq1.path2;transcripts=comp149097_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	62640685	62644691	.	+	.	ID=comp149097_c1_seq1.mrna2;geneID=comp149097_c1_seq1.path2;Name=comp149097_c1_seq1;Dir=indeterminatecoverage=41.8;identity=98.3;matches=234;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017874
Chr2	stalkie_big_nohaplotig	exon	62640685	62640695	100	+	.	Parent=comp149097_c1_seq1.mrna2;Target=comp149097_c1_seq1 342 332 .
Chr2	stalkie_big_nohaplotig	exon	62643746	62643747	100	+	.	Parent=comp149097_c1_seq1.mrna2;Target=comp149097_c1_seq1 344 343 .
Chr2	stalkie_big_nohaplotig	exon	62644468	62644691	98	+	.	Parent=comp149097_c1_seq1.mrna2;Target=comp149097_c1_seq1 568 345 .
Chr2	gffcl	locus	62641298	62642591	.	-	.	ID=RLOC_00017875;geneIDs=comp155784_c0_seq1.path1;transcripts=comp155784_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62641298	62642591	.	-	.	ID=comp155784_c0_seq1.mrna1;geneID=comp155784_c0_seq1.path1;Name=comp155784_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1293;mismatches=1;indels=0;unknowns=0;Target=comp155784_c0_seq1 1294 1 .;CDS_Target=comp155784_c0_seq1 194 3 .;locus=RLOC_00017875
Chr2	stalkie_big_nohaplotig	exon	62641298	62642591	99	-	.	Parent=comp155784_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62642398	62642589	.	-	0	Parent=comp155784_c0_seq1.mrna1
Chr2	gffcl	locus	62642640	62643732	.	-	.	ID=RLOC_00017876;geneIDs=comp118316_c1_seq1.path1;transcripts=comp118316_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62642640	62643732	.	-	.	ID=comp118316_c1_seq1.mrna1;geneID=comp118316_c1_seq1.path1;Name=comp118316_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1086;mismatches=3;indels=4;unknowns=0;Target=comp118316_c1_seq1 1089 1 .;CDS_Target=comp118316_c1_seq1 74 3 .;locus=RLOC_00017876
Chr2	stalkie_big_nohaplotig	exon	62642640	62643732	99	-	.	Parent=comp118316_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62643659	62643730	.	-	0	Parent=comp118316_c1_seq1.mrna1
Chr2	gffcl	locus	62644726	64348895	.	.	.	ID=RLOC_00017877;geneIDs=comp145794_c0_seq1.path1,comp151498_c1_seq1.path1,comp152598_c0_seq1.path1;transcripts=comp152598_c0_seq1.mrna1,comp151498_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62645218	62646463	.	-	.	ID=comp152598_c0_seq1.mrna1;geneID=comp152598_c0_seq1.path1;Name=comp152598_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.7;matches=1245;mismatches=1;indels=3;unknowns=0;Target=comp152598_c0_seq1 1249 1 .;CDS_Target=comp152598_c0_seq1 884 849 .;locus=RLOC_00017877
Chr2	stalkie_big_nohaplotig	exon	62645218	62646463	99	-	.	Parent=comp152598_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62645583	62645617	.	-	0	Parent=comp152598_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62645704	64348895	.	-	.	ID=comp151498_c1_seq1.mrna1;geneID=comp151498_c1_seq1.path1;Name=comp151498_c1_seq1;Dir=indeterminatecoverage=84.6;identity=99.1;matches=1316;mismatches=2;indels=10;unknowns=0;Target=comp151498_c1_seq1 564 457 .;locus=RLOC_00017877
Chr2	stalkie_big_nohaplotig	exon	62645704	62645709	100	-	.	Parent=comp151498_c1_seq1.mrna1;Target=comp151498_c1_seq1 1339 1334 .
Chr2	stalkie_big_nohaplotig	exon	62647016	62647020	100	-	.	Parent=comp151498_c1_seq1.mrna1;Target=comp151498_c1_seq1 1333 1329 .
Chr2	stalkie_big_nohaplotig	exon	62654062	62654067	100	-	.	Parent=comp151498_c1_seq1.mrna1;Target=comp151498_c1_seq1 1328 1323 .
Chr2	stalkie_big_nohaplotig	exon	64347587	64348895	99	-	.	Parent=comp151498_c1_seq1.mrna1;Target=comp151498_c1_seq1 1321 19 .
Chr2	stalkie_big_nohaplotig	CDS	64348350	64348457	.	-	0	Parent=comp151498_c1_seq1.mrna1
Chr2	gffcl	locus	62648506	62648927	.	-	.	ID=RLOC_00017878;geneIDs=comp146243_c0_seq1.path1;transcripts=comp146243_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62648506	62648927	.	-	.	ID=comp146243_c0_seq1.mrna1;geneID=comp146243_c0_seq1.path1;Name=comp146243_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=420;mismatches=2;indels=4;unknowns=0;Target=comp146243_c0_seq1 426 1 .;CDS_Target=comp146243_c0_seq1 377 282 .;locus=RLOC_00017878
Chr2	stalkie_big_nohaplotig	exon	62648506	62648927	98	-	.	Parent=comp146243_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62648555	62648650	.	-	0	Parent=comp146243_c0_seq1.mrna1
Chr2	gffcl	locus	62654758	62655487	.	+	.	ID=RLOC_00017879;geneIDs=ORF3302.path1;transcripts=ORF3302.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62654758	62655487	.	+	.	ID=ORF3302.mrna1;geneID=ORF3302.path1;Name=ORF3302;Dir=indeterminatecoverage=97.3;identity=100.0;matches=730;mismatches=0;indels=0;unknowns=0;Target=ORF3302 750 21 .;CDS_Target=ORF3302 750 22 .;locus=RLOC_00017879
Chr2	stalkie_big_nohaplotig	exon	62654758	62655487	100	+	.	Parent=ORF3302.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62654759	62655487	.	+	0	Parent=ORF3302.mrna1
Chr2	gffcl	locus	62656462	62661490	.	-	.	ID=RLOC_00017880;geneIDs=comp149716_c0_seq1.path1,comp154162_c3_seq1.path1;transcripts=comp154162_c3_seq1.mrna1,comp149716_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62656462	62661490	.	-	.	ID=comp154162_c3_seq1.mrna1;geneID=comp154162_c3_seq1.path1;Name=comp154162_c3_seq1;Dir=indeterminatecoverage=60.6;identity=96.5;matches=774;mismatches=3;indels=25;unknowns=0;Target=comp154162_c3_seq1 1462 1394 .;locus=RLOC_00017880
Chr2	stalkie_big_nohaplotig	exon	62656462	62657202	98	-	.	Parent=comp154162_c3_seq1.mrna1;Target=comp154162_c3_seq1 1464 736 .
Chr2	stalkie_big_nohaplotig	exon	62659795	62659807	84	-	.	Parent=comp154162_c3_seq1.mrna1;Target=comp154162_c3_seq1 735 723 .
Chr2	stalkie_big_nohaplotig	exon	62661211	62661234	64	-	.	Parent=comp154162_c3_seq1.mrna1;Target=comp154162_c3_seq1 722 686 .
Chr2	stalkie_big_nohaplotig	exon	62661481	62661490	100	-	.	Parent=comp154162_c3_seq1.mrna1;Target=comp154162_c3_seq1 568 559 .
Chr2	stalkie_big_nohaplotig	CDS	62656464	62656532	.	-	0	Parent=comp154162_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62659267	62659922	.	-	.	ID=comp149716_c0_seq1.mrna1;geneID=comp149716_c0_seq1.path1;Name=comp149716_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=654;mismatches=2;indels=0;unknowns=0;Target=comp149716_c0_seq1 656 1 .;CDS_Target=comp149716_c0_seq1 608 495 .;locus=RLOC_00017880
Chr2	stalkie_big_nohaplotig	exon	62659267	62659922	99	-	.	Parent=comp149716_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62659315	62659428	.	-	0	Parent=comp149716_c0_seq1.mrna1
Chr2	gffcl	locus	62660038	62660313	.	-	.	ID=RLOC_00017881;geneIDs=comp108555_c0_seq1.path1;transcripts=comp108555_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62660038	62660313	.	-	.	ID=comp108555_c0_seq1.mrna1;geneID=comp108555_c0_seq1.path1;Name=comp108555_c0_seq1;Dir=indeterminatecoverage=94.5;identity=99.6;matches=275;mismatches=1;indels=0;unknowns=0;Target=comp108555_c0_seq1 292 17 .;CDS_Target=comp108555_c0_seq1 122 18 .;locus=RLOC_00017881
Chr2	stalkie_big_nohaplotig	exon	62660038	62660313	99	-	.	Parent=comp108555_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62660208	62660312	.	-	0	Parent=comp108555_c0_seq1.mrna1
Chr2	gffcl	locus	62662142	62663134	.	-	.	ID=RLOC_00017882;geneIDs=comp143032_c0_seq1.path1;transcripts=comp143032_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62662142	62663134	.	-	.	ID=comp143032_c0_seq1.mrna1;geneID=comp143032_c0_seq1.path1;Name=comp143032_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.8;matches=991;mismatches=2;indels=0;unknowns=0;Target=comp143032_c0_seq1 993 1 .;CDS_Target=comp143032_c0_seq1 804 682 .;locus=RLOC_00017882
Chr2	stalkie_big_nohaplotig	exon	62662142	62663134	99	-	.	Parent=comp143032_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62662331	62662453	.	-	0	Parent=comp143032_c0_seq1.mrna1
Chr2	gffcl	locus	62668488	62669874	.	-	.	ID=RLOC_00017883;geneIDs=comp152847_c0_seq1.path1;transcripts=comp152847_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62668488	62669874	.	-	.	ID=comp152847_c0_seq1.mrna1;geneID=comp152847_c0_seq1.path1;Name=comp152847_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1385;mismatches=2;indels=0;unknowns=0;Target=comp152847_c0_seq1 1387 1 .;CDS_Target=comp152847_c0_seq1 776 597 .;locus=RLOC_00017883
Chr2	stalkie_big_nohaplotig	exon	62668488	62669874	99	-	.	Parent=comp152847_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62669099	62669278	.	-	0	Parent=comp152847_c0_seq1.mrna1
Chr2	gffcl	locus	62670543	62670991	.	-	.	ID=RLOC_00017884;geneIDs=comp143591_c0_seq1.path1;transcripts=comp143591_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62670543	62670991	.	-	.	ID=comp143591_c0_seq1.mrna1;geneID=comp143591_c0_seq1.path1;Name=comp143591_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=447;mismatches=2;indels=0;unknowns=0;Target=comp143591_c0_seq1 449 1 .;CDS_Target=comp143591_c0_seq1 130 2 .;locus=RLOC_00017884
Chr2	stalkie_big_nohaplotig	exon	62670543	62670991	99	-	.	Parent=comp143591_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62670862	62670990	.	-	0	Parent=comp143591_c0_seq1.mrna1
Chr2	gffcl	locus	62674415	62674764	.	+	.	ID=RLOC_00017885;geneIDs=comp143265_c0_seq1.path1;transcripts=comp143265_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62674415	62674764	.	+	.	ID=comp143265_c0_seq1.mrna1;geneID=comp143265_c0_seq1.path1;Name=comp143265_c0_seq1;Dir=indeterminatecoverage=94.1;identity=99.4;matches=348;mismatches=2;indels=0;unknowns=0;Target=comp143265_c0_seq1 372 23 .;CDS_Target=comp143265_c0_seq1 339 25 .;locus=RLOC_00017885
Chr2	stalkie_big_nohaplotig	exon	62674415	62674764	99	+	.	Parent=comp143265_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62674417	62674731	.	+	0	Parent=comp143265_c0_seq1.mrna1
Chr2	gffcl	locus	62678082	62683340	.	+	.	ID=RLOC_00017886;geneIDs=FBgn0005630.1.path1;transcripts=FBgn0005630.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62678082	62683340	.	+	.	ID=FBgn0005630.1.mrna1;geneID=FBgn0005630.1.path1;Name=FBgn0005630.1;Dir=indeterminatecoverage=57.5;identity=100.0;matches=1475;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017886
Chr2	stalkie_big_nohaplotig	exon	62678082	62678094	100	+	.	Parent=FBgn0005630.1.mrna1;Target=FBgn0005630.1 1166 1154 .
Chr2	stalkie_big_nohaplotig	exon	62681879	62683340	100	+	.	Parent=FBgn0005630.1.mrna1;Target=FBgn0005630.1 2712 1251 .
Chr2	stalkie_big_nohaplotig	CDS	62678084	62678094	.	+	0	Parent=FBgn0005630.1.mrna1;Target=FBgn0005630.1 1166 1156 .
Chr2	stalkie_big_nohaplotig	CDS	62681879	62683340	.	+	1	Parent=FBgn0005630.1.mrna1;Target=FBgn0005630.1 2712 1251 .
Chr2	gffcl	locus	62692134	62693097	.	-	.	ID=RLOC_00017887;geneIDs=FBgn0033529.1.path1;transcripts=FBgn0033529.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62692134	62693097	.	-	.	ID=FBgn0033529.1.mrna1;geneID=FBgn0033529.1.path1;Name=FBgn0033529.1;Dir=sensecoverage=100.0;identity=99.8;matches=611;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017887
Chr2	stalkie_big_nohaplotig	exon	62692134	62692357	100	-	.	Parent=FBgn0033529.1.mrna1;Target=FBgn0033529.1 389 612 +
Chr2	stalkie_big_nohaplotig	exon	62692426	62692569	100	-	.	Parent=FBgn0033529.1.mrna1;Target=FBgn0033529.1 245 388 +
Chr2	stalkie_big_nohaplotig	exon	62692801	62693011	100	-	.	Parent=FBgn0033529.1.mrna1;Target=FBgn0033529.1 34 244 +
Chr2	stalkie_big_nohaplotig	exon	62693065	62693097	96	-	.	Parent=FBgn0033529.1.mrna1;Target=FBgn0033529.1 1 33 +
Chr2	stalkie_big_nohaplotig	CDS	62692134	62692357	.	-	2	Parent=FBgn0033529.1.mrna1;Target=FBgn0033529.1 389 612 +
Chr2	stalkie_big_nohaplotig	CDS	62692426	62692569	.	-	2	Parent=FBgn0033529.1.mrna1;Target=FBgn0033529.1 245 388 +
Chr2	stalkie_big_nohaplotig	CDS	62692801	62693011	.	-	0	Parent=FBgn0033529.1.mrna1;Target=FBgn0033529.1 34 244 +
Chr2	stalkie_big_nohaplotig	CDS	62693065	62693097	.	-	0	Parent=FBgn0033529.1.mrna1;Target=FBgn0033529.1 1 33 +
Chr2	gffcl	locus	62695298	62698132	.	+	.	ID=RLOC_00017888;geneIDs=comp163864_c1_seq1.path1;transcripts=comp163864_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62695298	62698132	.	+	.	ID=comp163864_c1_seq1.mrna1;geneID=comp163864_c1_seq1.path1;Name=comp163864_c1_seq1;Dir=indeterminatecoverage=87.9;identity=99.2;matches=2811;mismatches=20;indels=4;unknowns=0;Target=comp163864_c1_seq1 2831 1 .;CDS_Target=comp163864_c1_seq1 2632 1124 .;locus=RLOC_00017888
Chr2	stalkie_big_nohaplotig	exon	62695298	62698132	99	+	.	Parent=comp163864_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62696425	62697933	.	+	0	Parent=comp163864_c1_seq1.mrna1
Chr2	gffcl	locus	62699686	62700655	.	+	.	ID=RLOC_00017889;geneIDs=FBgn0033528.1.path1;transcripts=FBgn0033528.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62699686	62700655	.	+	.	ID=FBgn0033528.1.mrna1;geneID=FBgn0033528.1.path1;Name=FBgn0033528.1;Dir=sensecoverage=100.0;identity=99.6;matches=732;mismatches=3;indels=0;unknowns=0;locus=RLOC_00017889
Chr2	stalkie_big_nohaplotig	exon	62699686	62699796	100	+	.	Parent=FBgn0033528.1.mrna1;Target=FBgn0033528.1 1 111 +
Chr2	stalkie_big_nohaplotig	exon	62699847	62699934	98	+	.	Parent=FBgn0033528.1.mrna1;Target=FBgn0033528.1 112 199 +
Chr2	stalkie_big_nohaplotig	exon	62699997	62700093	98	+	.	Parent=FBgn0033528.1.mrna1;Target=FBgn0033528.1 200 296 +
Chr2	stalkie_big_nohaplotig	exon	62700155	62700270	100	+	.	Parent=FBgn0033528.1.mrna1;Target=FBgn0033528.1 297 412 +
Chr2	stalkie_big_nohaplotig	exon	62700333	62700655	99	+	.	Parent=FBgn0033528.1.mrna1;Target=FBgn0033528.1 413 735 +
Chr2	stalkie_big_nohaplotig	CDS	62699686	62699796	.	+	0	Parent=FBgn0033528.1.mrna1;Target=FBgn0033528.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	62699847	62699934	.	+	0	Parent=FBgn0033528.1.mrna1;Target=FBgn0033528.1 112 199 +
Chr2	stalkie_big_nohaplotig	CDS	62699997	62700093	.	+	2	Parent=FBgn0033528.1.mrna1;Target=FBgn0033528.1 200 296 +
Chr2	stalkie_big_nohaplotig	CDS	62700155	62700270	.	+	1	Parent=FBgn0033528.1.mrna1;Target=FBgn0033528.1 297 412 +
Chr2	stalkie_big_nohaplotig	CDS	62700333	62700655	.	+	2	Parent=FBgn0033528.1.mrna1;Target=FBgn0033528.1 413 735 +
Chr2	gffcl	locus	62724265	62724798	.	-	.	ID=RLOC_00017890;geneIDs=comp143767_c0_seq1.path1;transcripts=comp143767_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62724265	62724798	.	-	.	ID=comp143767_c0_seq1.mrna1;geneID=comp143767_c0_seq1.path1;Name=comp143767_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=532;mismatches=2;indels=0;unknowns=0;Target=comp143767_c0_seq1 534 1 .;CDS_Target=comp143767_c0_seq1 103 2 .;locus=RLOC_00017890
Chr2	stalkie_big_nohaplotig	exon	62724265	62724798	99	-	.	Parent=comp143767_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62724696	62724797	.	-	0	Parent=comp143767_c0_seq1.mrna1
Chr2	gffcl	locus	62737422	62743374	.	.	.	ID=RLOC_00017891;geneIDs=FBgn0261862.1.path1,comp145157_c0_seq1.path1,comp157568_c1_seq1.path1;transcripts=FBgn0261862.1.mrna1,comp145157_c0_seq1.mrna1,comp157568_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62737422	62743374	.	+	.	ID=FBgn0261862.1.mrna1;geneID=FBgn0261862.1.path1;Name=FBgn0261862.1;Dir=sensecoverage=100.0;identity=99.7;matches=2337;mismatches=6;indels=0;unknowns=0;locus=RLOC_00017891
Chr2	stalkie_big_nohaplotig	exon	62737422	62737574	100	+	.	Parent=FBgn0261862.1.mrna1;Target=FBgn0261862.1 1 153 +
Chr2	stalkie_big_nohaplotig	exon	62737641	62738378	99	+	.	Parent=FBgn0261862.1.mrna1;Target=FBgn0261862.1 154 891 +
Chr2	stalkie_big_nohaplotig	exon	62738440	62738639	100	+	.	Parent=FBgn0261862.1.mrna1;Target=FBgn0261862.1 892 1091 +
Chr2	stalkie_big_nohaplotig	exon	62738698	62739036	99	+	.	Parent=FBgn0261862.1.mrna1;Target=FBgn0261862.1 1092 1430 +
Chr2	stalkie_big_nohaplotig	exon	62739454	62739513	100	+	.	Parent=FBgn0261862.1.mrna1;Target=FBgn0261862.1 1431 1490 +
Chr2	stalkie_big_nohaplotig	exon	62742317	62742449	100	+	.	Parent=FBgn0261862.1.mrna1;Target=FBgn0261862.1 1491 1623 +
Chr2	stalkie_big_nohaplotig	exon	62742519	62742767	100	+	.	Parent=FBgn0261862.1.mrna1;Target=FBgn0261862.1 1624 1872 +
Chr2	stalkie_big_nohaplotig	exon	62742834	62743193	100	+	.	Parent=FBgn0261862.1.mrna1;Target=FBgn0261862.1 1873 2232 +
Chr2	stalkie_big_nohaplotig	exon	62743264	62743374	100	+	.	Parent=FBgn0261862.1.mrna1;Target=FBgn0261862.1 2233 2343 +
Chr2	stalkie_big_nohaplotig	CDS	62737422	62737574	.	+	0	Parent=FBgn0261862.1.mrna1;Target=FBgn0261862.1 1 153 +
Chr2	stalkie_big_nohaplotig	CDS	62737641	62738378	.	+	0	Parent=FBgn0261862.1.mrna1;Target=FBgn0261862.1 154 891 +
Chr2	stalkie_big_nohaplotig	CDS	62738440	62738639	.	+	0	Parent=FBgn0261862.1.mrna1;Target=FBgn0261862.1 892 1091 +
Chr2	stalkie_big_nohaplotig	CDS	62738698	62739036	.	+	1	Parent=FBgn0261862.1.mrna1;Target=FBgn0261862.1 1092 1430 +
Chr2	stalkie_big_nohaplotig	CDS	62739454	62739513	.	+	1	Parent=FBgn0261862.1.mrna1;Target=FBgn0261862.1 1431 1490 +
Chr2	stalkie_big_nohaplotig	CDS	62742317	62742449	.	+	1	Parent=FBgn0261862.1.mrna1;Target=FBgn0261862.1 1491 1623 +
Chr2	stalkie_big_nohaplotig	CDS	62742519	62742767	.	+	0	Parent=FBgn0261862.1.mrna1;Target=FBgn0261862.1 1624 1872 +
Chr2	stalkie_big_nohaplotig	CDS	62742834	62743193	.	+	0	Parent=FBgn0261862.1.mrna1;Target=FBgn0261862.1 1873 2232 +
Chr2	stalkie_big_nohaplotig	CDS	62743264	62743374	.	+	0	Parent=FBgn0261862.1.mrna1;Target=FBgn0261862.1 2233 2343 +
Chr2	stalkie_big_nohaplotig	mRNA	62739014	62739475	.	+	.	ID=comp145157_c0_seq1.mrna1;geneID=comp145157_c0_seq1.path1;Name=comp145157_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=458;mismatches=4;indels=0;unknowns=0;Target=comp145157_c0_seq1 462 1 .;CDS_Target=comp145157_c0_seq1 370 257 .;locus=RLOC_00017891
Chr2	stalkie_big_nohaplotig	exon	62739014	62739475	99	+	.	Parent=comp145157_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62739270	62739383	.	+	0	Parent=comp145157_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62740601	62742339	.	-	.	ID=comp157568_c1_seq1.mrna1;geneID=comp157568_c1_seq1.path1;Name=comp157568_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1738;mismatches=1;indels=0;unknowns=0;Target=comp157568_c1_seq1 1739 1 .;CDS_Target=comp157568_c1_seq1 122 3 .;locus=RLOC_00017891
Chr2	stalkie_big_nohaplotig	exon	62740601	62742339	99	-	.	Parent=comp157568_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62742218	62742337	.	-	0	Parent=comp157568_c1_seq1.mrna1
Chr2	gffcl	locus	62744709	62745404	.	-	.	ID=RLOC_00017892;geneIDs=FBgn0033527.1.path1;transcripts=FBgn0033527.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62744709	62745404	.	-	.	ID=FBgn0033527.1.mrna1;geneID=FBgn0033527.1.path1;Name=FBgn0033527.1;Dir=sensecoverage=100.0;identity=98.4;matches=502;mismatches=8;indels=0;unknowns=0;locus=RLOC_00017892
Chr2	stalkie_big_nohaplotig	exon	62744709	62744832	95	-	.	Parent=FBgn0033527.1.mrna1;Target=FBgn0033527.1 387 510 +
Chr2	stalkie_big_nohaplotig	exon	62744897	62745015	98	-	.	Parent=FBgn0033527.1.mrna1;Target=FBgn0033527.1 268 386 +
Chr2	stalkie_big_nohaplotig	exon	62745075	62745311	100	-	.	Parent=FBgn0033527.1.mrna1;Target=FBgn0033527.1 31 267 +
Chr2	stalkie_big_nohaplotig	exon	62745375	62745404	100	-	.	Parent=FBgn0033527.1.mrna1;Target=FBgn0033527.1 1 30 +
Chr2	stalkie_big_nohaplotig	CDS	62744709	62744832	.	-	1	Parent=FBgn0033527.1.mrna1;Target=FBgn0033527.1 387 510 +
Chr2	stalkie_big_nohaplotig	CDS	62744897	62745015	.	-	0	Parent=FBgn0033527.1.mrna1;Target=FBgn0033527.1 268 386 +
Chr2	stalkie_big_nohaplotig	CDS	62745075	62745311	.	-	0	Parent=FBgn0033527.1.mrna1;Target=FBgn0033527.1 31 267 +
Chr2	stalkie_big_nohaplotig	CDS	62745375	62745404	.	-	0	Parent=FBgn0033527.1.mrna1;Target=FBgn0033527.1 1 30 +
Chr2	gffcl	locus	62763668	62763813	.	+	.	ID=RLOC_00017893;geneIDs=comp135128_c0_seq1.path1;transcripts=comp135128_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62763668	62763813	.	+	.	ID=comp135128_c0_seq1.mrna1;geneID=comp135128_c0_seq1.path1;Name=comp135128_c0_seq1;Dir=indeterminatecoverage=46.9;identity=84.9;matches=124;mismatches=22;indels=0;unknowns=0;Target=comp135128_c0_seq1 309 164 .;CDS_Target=comp135128_c0_seq1 215 165 .;locus=RLOC_00017893
Chr2	stalkie_big_nohaplotig	exon	62763668	62763813	84	+	.	Parent=comp135128_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62763669	62763719	.	+	0	Parent=comp135128_c0_seq1.mrna1
Chr2	gffcl	locus	62797756	62800258	.	+	.	ID=RLOC_00017894;geneIDs=comp118641_c0_seq1.path1;transcripts=comp118641_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62797756	62800258	.	+	.	ID=comp118641_c0_seq1.mrna1;geneID=comp118641_c0_seq1.path1;Name=comp118641_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=710;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017894
Chr2	stalkie_big_nohaplotig	exon	62797756	62797854	98	+	.	Parent=comp118641_c0_seq1.mrna1;Target=comp118641_c0_seq1 1 99 +
Chr2	stalkie_big_nohaplotig	exon	62799646	62800258	99	+	.	Parent=comp118641_c0_seq1.mrna1;Target=comp118641_c0_seq1 100 712 +
Chr2	stalkie_big_nohaplotig	CDS	62797756	62797854	.	+	0	Parent=comp118641_c0_seq1.mrna1;Target=comp118641_c0_seq1 1 99 +
Chr2	stalkie_big_nohaplotig	CDS	62799646	62799924	.	+	0	Parent=comp118641_c0_seq1.mrna1;Target=comp118641_c0_seq1 100 378 +
Chr2	gffcl	locus	62876869	62877333	.	-	.	ID=RLOC_00017896;geneIDs=Dp_FBgn0080571.1.path1;transcripts=Dp_FBgn0080571.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62876869	62877333	.	-	.	ID=Dp_FBgn0080571.1.mrna1;geneID=Dp_FBgn0080571.1.path1;Name=Dp_FBgn0080571.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=464;mismatches=1;indels=0;unknowns=0;Target=Dp_FBgn0080571.1 465 1 .;locus=RLOC_00017896
Chr2	stalkie_big_nohaplotig	exon	62876869	62877333	99	-	.	Parent=Dp_FBgn0080571.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62876869	62877333	.	-	0	Parent=Dp_FBgn0080571.1.mrna1
Chr2	gffcl	locus	62896033	62897777	.	-	.	ID=RLOC_00017897;geneIDs=comp124924_c1_seq1.path1,comp143134_c0_seq1.path1;transcripts=comp124924_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62896467	62897777	.	-	.	ID=comp124924_c1_seq1.mrna1;geneID=comp124924_c1_seq1.path1;Name=comp124924_c1_seq1;Dir=sensecoverage=94.9;identity=97.9;matches=640;mismatches=12;indels=2;unknowns=0;locus=RLOC_00017897
Chr2	stalkie_big_nohaplotig	exon	62896467	62896608	99	-	.	Parent=comp124924_c1_seq1.mrna1;Target=comp124924_c1_seq1 529 670 +
Chr2	stalkie_big_nohaplotig	exon	62896680	62896765	100	-	.	Parent=comp124924_c1_seq1.mrna1;Target=comp124924_c1_seq1 443 528 +
Chr2	stalkie_big_nohaplotig	exon	62897020	62897170	98	-	.	Parent=comp124924_c1_seq1.mrna1;Target=comp124924_c1_seq1 292 442 +
Chr2	stalkie_big_nohaplotig	exon	62897505	62897777	96	-	.	Parent=comp124924_c1_seq1.mrna1;Target=comp124924_c1_seq1 17 291 +
Chr2	stalkie_big_nohaplotig	CDS	62896700	62896765	.	-	0	Parent=comp124924_c1_seq1.mrna1;Target=comp124924_c1_seq1 443 508 +
Chr2	stalkie_big_nohaplotig	CDS	62897020	62897031	.	-	0	Parent=comp124924_c1_seq1.mrna1;Target=comp124924_c1_seq1 431 442 +
Chr2	gffcl	locus	62924469	62929401	.	+	.	ID=RLOC_00017898;geneIDs=FBgn0085434.path1;transcripts=FBgn0085434.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62924469	62929401	.	+	.	ID=FBgn0085434.mrna1;geneID=FBgn0085434.path1;Name=FBgn0085434;Dir=sensecoverage=100.0;identity=99.7;matches=2393;mismatches=7;indels=0;unknowns=0;locus=RLOC_00017898
Chr2	stalkie_big_nohaplotig	exon	62924469	62924616	100	+	.	Parent=FBgn0085434.mrna1;Target=FBgn0085434 1 148 +
Chr2	stalkie_big_nohaplotig	exon	62924697	62925366	99	+	.	Parent=FBgn0085434.mrna1;Target=FBgn0085434 149 818 +
Chr2	stalkie_big_nohaplotig	exon	62925425	62925784	99	+	.	Parent=FBgn0085434.mrna1;Target=FBgn0085434 819 1178 +
Chr2	stalkie_big_nohaplotig	exon	62925856	62925964	100	+	.	Parent=FBgn0085434.mrna1;Target=FBgn0085434 1179 1287 +
Chr2	stalkie_big_nohaplotig	exon	62926275	62926456	100	+	.	Parent=FBgn0085434.mrna1;Target=FBgn0085434 1288 1469 +
Chr2	stalkie_big_nohaplotig	exon	62927922	62928040	100	+	.	Parent=FBgn0085434.mrna1;Target=FBgn0085434 1470 1588 +
Chr2	stalkie_big_nohaplotig	exon	62928458	62928643	100	+	.	Parent=FBgn0085434.mrna1;Target=FBgn0085434 1589 1774 +
Chr2	stalkie_big_nohaplotig	exon	62928720	62928887	99	+	.	Parent=FBgn0085434.mrna1;Target=FBgn0085434 1775 1942 +
Chr2	stalkie_big_nohaplotig	exon	62928944	62929401	99	+	.	Parent=FBgn0085434.mrna1;Target=FBgn0085434 1943 2400 +
Chr2	stalkie_big_nohaplotig	CDS	62924469	62924616	.	+	0	Parent=FBgn0085434.mrna1;Target=FBgn0085434 1 148 +
Chr2	stalkie_big_nohaplotig	CDS	62924697	62925366	.	+	2	Parent=FBgn0085434.mrna1;Target=FBgn0085434 149 818 +
Chr2	stalkie_big_nohaplotig	CDS	62925425	62925784	.	+	1	Parent=FBgn0085434.mrna1;Target=FBgn0085434 819 1178 +
Chr2	stalkie_big_nohaplotig	CDS	62925856	62925964	.	+	1	Parent=FBgn0085434.mrna1;Target=FBgn0085434 1179 1287 +
Chr2	stalkie_big_nohaplotig	CDS	62926275	62926456	.	+	0	Parent=FBgn0085434.mrna1;Target=FBgn0085434 1288 1469 +
Chr2	stalkie_big_nohaplotig	CDS	62927922	62928040	.	+	1	Parent=FBgn0085434.mrna1;Target=FBgn0085434 1470 1588 +
Chr2	stalkie_big_nohaplotig	CDS	62928458	62928643	.	+	2	Parent=FBgn0085434.mrna1;Target=FBgn0085434 1589 1774 +
Chr2	stalkie_big_nohaplotig	CDS	62928720	62928887	.	+	2	Parent=FBgn0085434.mrna1;Target=FBgn0085434 1775 1942 +
Chr2	stalkie_big_nohaplotig	CDS	62928944	62929401	.	+	2	Parent=FBgn0085434.mrna1;Target=FBgn0085434 1943 2400 +
Chr2	gffcl	locus	62931248	62931542	.	+	.	ID=RLOC_00017899;geneIDs=comp147429_c1_seq1.path1;transcripts=comp147429_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62931248	62931542	.	+	.	ID=comp147429_c1_seq1.mrna1;geneID=comp147429_c1_seq1.path1;Name=comp147429_c1_seq1;Dir=indeterminatecoverage=88.2;identity=92.0;matches=275;mismatches=12;indels=12;unknowns=0;Target=comp147429_c1_seq1 302 12 .;CDS_Target=comp147429_c1_seq1 243 139 .;locus=RLOC_00017899
Chr2	stalkie_big_nohaplotig	exon	62931248	62931542	91	+	.	Parent=comp147429_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62931375	62931483	.	+	0	Parent=comp147429_c1_seq1.mrna1
Chr2	gffcl	locus	62931892	62932828	.	+	.	ID=RLOC_00017900;geneIDs=comp160846_c0_seq1.path1;transcripts=comp160846_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62931892	62932828	.	+	.	ID=comp160846_c0_seq1.mrna1;geneID=comp160846_c0_seq1.path1;Name=comp160846_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=933;mismatches=4;indels=9;unknowns=0;Target=comp160846_c0_seq1 946 1 .;CDS_Target=comp160846_c0_seq1 463 389 .;locus=RLOC_00017900
Chr2	stalkie_big_nohaplotig	exon	62931892	62932828	98	+	.	Parent=comp160846_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62932280	62932354	.	+	0	Parent=comp160846_c0_seq1.mrna1
Chr2	gffcl	locus	62932923	62933514	.	+	.	ID=RLOC_00017901;geneIDs=comp142683_c0_seq1.path1;transcripts=comp142683_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62932923	62933514	.	+	.	ID=comp142683_c0_seq1.mrna1;geneID=comp142683_c0_seq1.path1;Name=comp142683_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=591;mismatches=1;indels=0;unknowns=0;Target=comp142683_c0_seq1 592 1 .;CDS_Target=comp142683_c0_seq1 66 1 .;locus=RLOC_00017901
Chr2	stalkie_big_nohaplotig	exon	62932923	62933514	99	+	.	Parent=comp142683_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62932923	62932988	.	+	0	Parent=comp142683_c0_seq1.mrna1
Chr2	gffcl	locus	62934035	62934412	.	+	.	ID=RLOC_00017902;geneIDs=comp152540_c0_seq1.path1;transcripts=comp152540_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62934035	62934412	.	+	.	ID=comp152540_c0_seq1.mrna1;geneID=comp152540_c0_seq1.path1;Name=comp152540_c0_seq1;Dir=indeterminatecoverage=95.5;identity=100.0;matches=378;mismatches=0;indels=0;unknowns=0;Target=comp152540_c0_seq1 396 19 .;CDS_Target=comp152540_c0_seq1 81 19 .;locus=RLOC_00017902
Chr2	stalkie_big_nohaplotig	exon	62934035	62934412	100	+	.	Parent=comp152540_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62934035	62934097	.	+	0	Parent=comp152540_c0_seq1.mrna1
Chr2	gffcl	locus	62934946	62935577	.	-	.	ID=RLOC_00017903;geneIDs=comp151994_c0_seq1.path1;transcripts=comp151994_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62934946	62935577	.	-	.	ID=comp151994_c0_seq1.mrna1;geneID=comp151994_c0_seq1.path1;Name=comp151994_c0_seq1;Dir=indeterminatecoverage=88.8;identity=94.6;matches=598;mismatches=2;indels=32;unknowns=0;Target=comp151994_c0_seq1 623 24 .;CDS_Target=comp151994_c0_seq1 420 343 .;locus=RLOC_00017903
Chr2	stalkie_big_nohaplotig	exon	62934946	62935577	94	-	.	Parent=comp151994_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62935149	62935226	.	-	0	Parent=comp151994_c0_seq1.mrna1
Chr2	gffcl	locus	62936473	62937090	.	+	.	ID=RLOC_00017904;geneIDs=comp147143_c0_seq1.path1;transcripts=comp147143_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62936473	62937090	.	+	.	ID=comp147143_c0_seq1.mrna1;geneID=comp147143_c0_seq1.path1;Name=comp147143_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.8;matches=618;mismatches=0;indels=1;unknowns=0;Target=comp147143_c0_seq1 629 11 .;CDS_Target=comp147143_c0_seq1 497 405 .;locus=RLOC_00017904
Chr2	stalkie_big_nohaplotig	exon	62936473	62937090	99	+	.	Parent=comp147143_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62936866	62936958	.	+	0	Parent=comp147143_c0_seq1.mrna1
Chr2	gffcl	locus	62941768	62943134	.	.	.	ID=RLOC_00017905;geneIDs=FBgn0034753.1.path1,comp151546_c0_seq1.path1;transcripts=FBgn0034753.1.mrna1,comp151546_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62941768	62943134	.	-	.	ID=FBgn0034753.1.mrna1;geneID=FBgn0034753.1.path1;Name=FBgn0034753.1;Dir=sensecoverage=100.0;identity=99.8;matches=641;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017905
Chr2	stalkie_big_nohaplotig	exon	62941768	62942167	99	-	.	Parent=FBgn0034753.1.mrna1;Target=FBgn0034753.1 243 642 +
Chr2	stalkie_big_nohaplotig	exon	62942808	62942932	100	-	.	Parent=FBgn0034753.1.mrna1;Target=FBgn0034753.1 118 242 +
Chr2	stalkie_big_nohaplotig	exon	62943018	62943134	100	-	.	Parent=FBgn0034753.1.mrna1;Target=FBgn0034753.1 1 117 +
Chr2	stalkie_big_nohaplotig	CDS	62941768	62942167	.	-	1	Parent=FBgn0034753.1.mrna1;Target=FBgn0034753.1 243 642 +
Chr2	stalkie_big_nohaplotig	CDS	62942808	62942932	.	-	0	Parent=FBgn0034753.1.mrna1;Target=FBgn0034753.1 118 242 +
Chr2	stalkie_big_nohaplotig	CDS	62943018	62943134	.	-	0	Parent=FBgn0034753.1.mrna1;Target=FBgn0034753.1 1 117 +
Chr2	stalkie_big_nohaplotig	mRNA	62942146	62942831	.	+	.	ID=comp151546_c0_seq1.mrna1;geneID=comp151546_c0_seq1.path1;Name=comp151546_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=684;mismatches=2;indels=1;unknowns=0;Target=comp151546_c0_seq1 687 1 .;CDS_Target=comp151546_c0_seq1 429 253 .;locus=RLOC_00017905
Chr2	stalkie_big_nohaplotig	exon	62942146	62942831	99	+	.	Parent=comp151546_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62942398	62942574	.	+	0	Parent=comp151546_c0_seq1.mrna1
Chr2	gffcl	locus	62945138	62949473	.	-	.	ID=RLOC_00017906;geneIDs=FBgn0034032.1.path1;transcripts=FBgn0034032.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62945138	62949473	.	-	.	ID=FBgn0034032.1.mrna1;geneID=FBgn0034032.1.path1;Name=FBgn0034032.1;Dir=sensecoverage=100.0;identity=99.5;matches=1373;mismatches=7;indels=0;unknowns=0;locus=RLOC_00017906
Chr2	stalkie_big_nohaplotig	exon	62945138	62945183	100	-	.	Parent=FBgn0034032.1.mrna1;Target=FBgn0034032.1 1335 1380 +
Chr2	stalkie_big_nohaplotig	exon	62945248	62945499	98	-	.	Parent=FBgn0034032.1.mrna1;Target=FBgn0034032.1 1083 1334 +
Chr2	stalkie_big_nohaplotig	exon	62945562	62945721	100	-	.	Parent=FBgn0034032.1.mrna1;Target=FBgn0034032.1 923 1082 +
Chr2	stalkie_big_nohaplotig	exon	62945791	62945941	99	-	.	Parent=FBgn0034032.1.mrna1;Target=FBgn0034032.1 772 922 +
Chr2	stalkie_big_nohaplotig	exon	62946008	62946190	100	-	.	Parent=FBgn0034032.1.mrna1;Target=FBgn0034032.1 589 771 +
Chr2	stalkie_big_nohaplotig	exon	62946253	62946486	100	-	.	Parent=FBgn0034032.1.mrna1;Target=FBgn0034032.1 355 588 +
Chr2	stalkie_big_nohaplotig	exon	62949002	62949055	100	-	.	Parent=FBgn0034032.1.mrna1;Target=FBgn0034032.1 301 354 +
Chr2	stalkie_big_nohaplotig	exon	62949110	62949250	100	-	.	Parent=FBgn0034032.1.mrna1;Target=FBgn0034032.1 160 300 +
Chr2	stalkie_big_nohaplotig	exon	62949315	62949473	99	-	.	Parent=FBgn0034032.1.mrna1;Target=FBgn0034032.1 1 159 +
Chr2	stalkie_big_nohaplotig	CDS	62945138	62945183	.	-	1	Parent=FBgn0034032.1.mrna1;Target=FBgn0034032.1 1335 1380 +
Chr2	stalkie_big_nohaplotig	CDS	62945248	62945499	.	-	1	Parent=FBgn0034032.1.mrna1;Target=FBgn0034032.1 1083 1334 +
Chr2	stalkie_big_nohaplotig	CDS	62945562	62945721	.	-	2	Parent=FBgn0034032.1.mrna1;Target=FBgn0034032.1 923 1082 +
Chr2	stalkie_big_nohaplotig	CDS	62945791	62945941	.	-	0	Parent=FBgn0034032.1.mrna1;Target=FBgn0034032.1 772 922 +
Chr2	stalkie_big_nohaplotig	CDS	62946008	62946190	.	-	0	Parent=FBgn0034032.1.mrna1;Target=FBgn0034032.1 589 771 +
Chr2	stalkie_big_nohaplotig	CDS	62946253	62946486	.	-	0	Parent=FBgn0034032.1.mrna1;Target=FBgn0034032.1 355 588 +
Chr2	stalkie_big_nohaplotig	CDS	62949002	62949055	.	-	0	Parent=FBgn0034032.1.mrna1;Target=FBgn0034032.1 301 354 +
Chr2	stalkie_big_nohaplotig	CDS	62949110	62949250	.	-	0	Parent=FBgn0034032.1.mrna1;Target=FBgn0034032.1 160 300 +
Chr2	stalkie_big_nohaplotig	CDS	62949315	62949473	.	-	0	Parent=FBgn0034032.1.mrna1;Target=FBgn0034032.1 1 159 +
Chr2	gffcl	locus	62953836	62954459	.	-	.	ID=RLOC_00017907;geneIDs=FBgn0040010.1.path1;transcripts=FBgn0040010.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62953836	62954459	.	-	.	ID=FBgn0040010.1.mrna1;geneID=FBgn0040010.1.path1;Name=FBgn0040010.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=622;mismatches=2;indels=0;unknowns=0;Target=FBgn0040010.1 624 1 .;locus=RLOC_00017907
Chr2	stalkie_big_nohaplotig	exon	62953836	62954459	99	-	.	Parent=FBgn0040010.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	62953836	62954459	.	-	0	Parent=FBgn0040010.1.mrna1
Chr2	gffcl	locus	62957575	62971952	.	+	.	ID=RLOC_00017908;geneIDs=FBgn0033578.1.path1;transcripts=FBgn0033578.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62957575	62971952	.	+	.	ID=FBgn0033578.1.mrna1;geneID=FBgn0033578.1.path1;Name=FBgn0033578.1;Dir=sensecoverage=100.0;identity=99.8;matches=1619;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017908
Chr2	stalkie_big_nohaplotig	exon	62957575	62957734	98	+	.	Parent=FBgn0033578.1.mrna1;Target=FBgn0033578.1 1 160 +
Chr2	stalkie_big_nohaplotig	exon	62957808	62957947	100	+	.	Parent=FBgn0033578.1.mrna1;Target=FBgn0033578.1 161 300 +
Chr2	stalkie_big_nohaplotig	exon	62958207	62958319	100	+	.	Parent=FBgn0033578.1.mrna1;Target=FBgn0033578.1 301 413 +
Chr2	stalkie_big_nohaplotig	exon	62961661	62961951	100	+	.	Parent=FBgn0033578.1.mrna1;Target=FBgn0033578.1 414 704 +
Chr2	stalkie_big_nohaplotig	exon	62962283	62962436	100	+	.	Parent=FBgn0033578.1.mrna1;Target=FBgn0033578.1 705 858 +
Chr2	stalkie_big_nohaplotig	exon	62964296	62964418	100	+	.	Parent=FBgn0033578.1.mrna1;Target=FBgn0033578.1 859 981 +
Chr2	stalkie_big_nohaplotig	exon	62964525	62964609	100	+	.	Parent=FBgn0033578.1.mrna1;Target=FBgn0033578.1 982 1066 +
Chr2	stalkie_big_nohaplotig	exon	62969234	62969320	100	+	.	Parent=FBgn0033578.1.mrna1;Target=FBgn0033578.1 1067 1153 +
Chr2	stalkie_big_nohaplotig	exon	62969523	62969731	100	+	.	Parent=FBgn0033578.1.mrna1;Target=FBgn0033578.1 1154 1362 +
Chr2	stalkie_big_nohaplotig	exon	62971692	62971952	99	+	.	Parent=FBgn0033578.1.mrna1;Target=FBgn0033578.1 1363 1623 +
Chr2	stalkie_big_nohaplotig	CDS	62957575	62957734	.	+	0	Parent=FBgn0033578.1.mrna1;Target=FBgn0033578.1 1 160 +
Chr2	stalkie_big_nohaplotig	CDS	62957808	62957947	.	+	2	Parent=FBgn0033578.1.mrna1;Target=FBgn0033578.1 161 300 +
Chr2	stalkie_big_nohaplotig	CDS	62958207	62958319	.	+	0	Parent=FBgn0033578.1.mrna1;Target=FBgn0033578.1 301 413 +
Chr2	stalkie_big_nohaplotig	CDS	62961661	62961951	.	+	1	Parent=FBgn0033578.1.mrna1;Target=FBgn0033578.1 414 704 +
Chr2	stalkie_big_nohaplotig	CDS	62962283	62962436	.	+	1	Parent=FBgn0033578.1.mrna1;Target=FBgn0033578.1 705 858 +
Chr2	stalkie_big_nohaplotig	CDS	62964296	62964418	.	+	0	Parent=FBgn0033578.1.mrna1;Target=FBgn0033578.1 859 981 +
Chr2	stalkie_big_nohaplotig	CDS	62964525	62964609	.	+	0	Parent=FBgn0033578.1.mrna1;Target=FBgn0033578.1 982 1066 +
Chr2	stalkie_big_nohaplotig	CDS	62969234	62969320	.	+	2	Parent=FBgn0033578.1.mrna1;Target=FBgn0033578.1 1067 1153 +
Chr2	stalkie_big_nohaplotig	CDS	62969523	62969731	.	+	2	Parent=FBgn0033578.1.mrna1;Target=FBgn0033578.1 1154 1362 +
Chr2	stalkie_big_nohaplotig	CDS	62971692	62971952	.	+	0	Parent=FBgn0033578.1.mrna1;Target=FBgn0033578.1 1363 1623 +
Chr2	gffcl	locus	62975701	62985701	.	-	.	ID=RLOC_00017909;geneIDs=FBgn0033579.1.path1;transcripts=FBgn0033579.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	62975701	62985701	.	-	.	ID=FBgn0033579.1.mrna1;geneID=FBgn0033579.1.path1;Name=FBgn0033579.1;Dir=sensecoverage=100.0;identity=99.9;matches=839;mismatches=1;indels=0;unknowns=3;locus=RLOC_00017909
Chr2	stalkie_big_nohaplotig	exon	62975701	62975794	100	-	.	Parent=FBgn0033579.1.mrna1;Target=FBgn0033579.1 750 843 +
Chr2	stalkie_big_nohaplotig	exon	62977393	62977563	100	-	.	Parent=FBgn0033579.1.mrna1;Target=FBgn0033579.1 579 749 +
Chr2	stalkie_big_nohaplotig	exon	62978260	62978448	100	-	.	Parent=FBgn0033579.1.mrna1;Target=FBgn0033579.1 390 578 +
Chr2	stalkie_big_nohaplotig	exon	62979033	62979159	99	-	.	Parent=FBgn0033579.1.mrna1;Target=FBgn0033579.1 263 389 +
Chr2	stalkie_big_nohaplotig	exon	62979230	62979401	100	-	.	Parent=FBgn0033579.1.mrna1;Target=FBgn0033579.1 91 262 +
Chr2	stalkie_big_nohaplotig	exon	62985612	62985701	100	-	.	Parent=FBgn0033579.1.mrna1;Target=FBgn0033579.1 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	62975701	62975794	.	-	1	Parent=FBgn0033579.1.mrna1;Target=FBgn0033579.1 750 843 +
Chr2	stalkie_big_nohaplotig	CDS	62977393	62977563	.	-	1	Parent=FBgn0033579.1.mrna1;Target=FBgn0033579.1 579 749 +
Chr2	stalkie_big_nohaplotig	CDS	62978260	62978448	.	-	1	Parent=FBgn0033579.1.mrna1;Target=FBgn0033579.1 390 578 +
Chr2	stalkie_big_nohaplotig	CDS	62979033	62979159	.	-	2	Parent=FBgn0033579.1.mrna1;Target=FBgn0033579.1 263 389 +
Chr2	stalkie_big_nohaplotig	CDS	62979230	62979401	.	-	0	Parent=FBgn0033579.1.mrna1;Target=FBgn0033579.1 91 262 +
Chr2	stalkie_big_nohaplotig	CDS	62985612	62985701	.	-	0	Parent=FBgn0033579.1.mrna1;Target=FBgn0033579.1 1 90 +
Chr2	gffcl	locus	63141788	63143521	.	+	.	ID=RLOC_00017912;geneIDs=FBgn0035076.1.path1;transcripts=FBgn0035076.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63141788	63143521	.	+	.	ID=FBgn0035076.1.mrna1;geneID=FBgn0035076.1.path1;Name=FBgn0035076.1;Dir=sensecoverage=99.2;identity=99.7;matches=1530;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017912
Chr2	stalkie_big_nohaplotig	exon	63141788	63141853	100	+	.	Parent=FBgn0035076.1.mrna1;Target=FBgn0035076.1 1 66 +
Chr2	stalkie_big_nohaplotig	exon	63141925	63142823	99	+	.	Parent=FBgn0035076.1.mrna1;Target=FBgn0035076.1 67 965 +
Chr2	stalkie_big_nohaplotig	exon	63142884	63143229	99	+	.	Parent=FBgn0035076.1.mrna1;Target=FBgn0035076.1 966 1311 +
Chr2	stalkie_big_nohaplotig	exon	63143298	63143521	99	+	.	Parent=FBgn0035076.1.mrna1;Target=FBgn0035076.1 1312 1535 +
Chr2	stalkie_big_nohaplotig	CDS	63141788	63141853	.	+	0	Parent=FBgn0035076.1.mrna1;Target=FBgn0035076.1 1 66 +
Chr2	stalkie_big_nohaplotig	CDS	63141925	63142823	.	+	0	Parent=FBgn0035076.1.mrna1;Target=FBgn0035076.1 67 965 +
Chr2	stalkie_big_nohaplotig	CDS	63142884	63143229	.	+	1	Parent=FBgn0035076.1.mrna1;Target=FBgn0035076.1 966 1311 +
Chr2	stalkie_big_nohaplotig	CDS	63143298	63143519	.	+	0	Parent=FBgn0035076.1.mrna1;Target=FBgn0035076.1 1312 1533 +
Chr2	gffcl	locus	63146008	63149563	.	+	.	ID=RLOC_00017913;geneIDs=FBgn0035076.2.path1;transcripts=FBgn0035076.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63146008	63149563	.	+	.	ID=FBgn0035076.2.mrna1;geneID=FBgn0035076.2.path1;Name=FBgn0035076.2;Dir=sensecoverage=99.3;identity=99.9;matches=1979;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017913
Chr2	stalkie_big_nohaplotig	exon	63146008	63146127	100	+	.	Parent=FBgn0035076.2.mrna1;Target=FBgn0035076.2 1 120 +
Chr2	stalkie_big_nohaplotig	exon	63146193	63146808	100	+	.	Parent=FBgn0035076.2.mrna1;Target=FBgn0035076.2 121 736 +
Chr2	stalkie_big_nohaplotig	exon	63147741	63148104	99	+	.	Parent=FBgn0035076.2.mrna1;Target=FBgn0035076.2 737 1100 +
Chr2	stalkie_big_nohaplotig	exon	63148174	63148519	100	+	.	Parent=FBgn0035076.2.mrna1;Target=FBgn0035076.2 1101 1446 +
Chr2	stalkie_big_nohaplotig	exon	63148592	63148812	100	+	.	Parent=FBgn0035076.2.mrna1;Target=FBgn0035076.2 1447 1667 +
Chr2	stalkie_big_nohaplotig	exon	63149145	63149285	99	+	.	Parent=FBgn0035076.2.mrna1;Target=FBgn0035076.2 1668 1808 +
Chr2	stalkie_big_nohaplotig	exon	63149391	63149563	100	+	.	Parent=FBgn0035076.2.mrna1;Target=FBgn0035076.2 1809 1981 +
Chr2	stalkie_big_nohaplotig	CDS	63146008	63146127	.	+	0	Parent=FBgn0035076.2.mrna1;Target=FBgn0035076.2 1 120 +
Chr2	stalkie_big_nohaplotig	CDS	63146193	63146808	.	+	0	Parent=FBgn0035076.2.mrna1;Target=FBgn0035076.2 121 736 +
Chr2	stalkie_big_nohaplotig	CDS	63147741	63148104	.	+	2	Parent=FBgn0035076.2.mrna1;Target=FBgn0035076.2 737 1100 +
Chr2	stalkie_big_nohaplotig	CDS	63148174	63148519	.	+	1	Parent=FBgn0035076.2.mrna1;Target=FBgn0035076.2 1101 1446 +
Chr2	stalkie_big_nohaplotig	CDS	63148592	63148812	.	+	0	Parent=FBgn0035076.2.mrna1;Target=FBgn0035076.2 1447 1667 +
Chr2	stalkie_big_nohaplotig	CDS	63149145	63149285	.	+	1	Parent=FBgn0035076.2.mrna1;Target=FBgn0035076.2 1668 1808 +
Chr2	stalkie_big_nohaplotig	CDS	63149391	63149562	.	+	1	Parent=FBgn0035076.2.mrna1;Target=FBgn0035076.2 1809 1980 +
Chr2	gffcl	locus	63150412	65131933	.	.	.	ID=RLOC_00017914;geneIDs=FBgn0027538.1.path1,FBgn0085442.2.path1,comp135775_c0_seq1.path1,comp156910_c2_seq1.path1;transcripts=comp135775_c0_seq1.mrna1,FBgn0085442.2.mrna1,comp156910_c2_seq1.mrna1,FBgn0027538.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63150412	65130336	.	-	.	ID=comp135775_c0_seq1.mrna1;geneID=comp135775_c0_seq1.path1;Name=comp135775_c0_seq1;Dir=indeterminatecoverage=93.7;identity=97.2;matches=591;mismatches=1;indels=16;unknowns=0;Target=comp135775_c0_seq1 311 171 .;locus=RLOC_00017914
Chr2	stalkie_big_nohaplotig	exon	63150412	63150421	100	-	.	Parent=comp135775_c0_seq1.mrna1;Target=comp135775_c0_seq1 608 599 .
Chr2	stalkie_big_nohaplotig	exon	63158561	63158562	100	-	.	Parent=comp135775_c0_seq1.mrna1;Target=comp135775_c0_seq1 598 597 .
Chr2	stalkie_big_nohaplotig	exon	63163695	63163697	100	-	.	Parent=comp135775_c0_seq1.mrna1;Target=comp135775_c0_seq1 596 594 .
Chr2	stalkie_big_nohaplotig	exon	63169858	63169864	100	-	.	Parent=comp135775_c0_seq1.mrna1;Target=comp135775_c0_seq1 593 587 .
Chr2	stalkie_big_nohaplotig	exon	65129767	65130336	97	-	.	Parent=comp135775_c0_seq1.mrna1;Target=comp135775_c0_seq1 586 1 .
Chr2	stalkie_big_nohaplotig	CDS	65130026	65130166	.	-	0	Parent=comp135775_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63167067	63170203	.	-	.	ID=FBgn0085442.2.mrna1;geneID=FBgn0085442.2.path1;Name=FBgn0085442.2;Dir=sensecoverage=100.0;identity=99.6;matches=1055;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017914
Chr2	stalkie_big_nohaplotig	exon	63167067	63168004	99	-	.	Parent=FBgn0085442.2.mrna1;Target=FBgn0085442.2 122 1059 +
Chr2	stalkie_big_nohaplotig	exon	63170083	63170203	100	-	.	Parent=FBgn0085442.2.mrna1;Target=FBgn0085442.2 1 121 +
Chr2	stalkie_big_nohaplotig	CDS	63167067	63168004	.	-	2	Parent=FBgn0085442.2.mrna1;Target=FBgn0085442.2 122 1059 +
Chr2	stalkie_big_nohaplotig	CDS	63170083	63170203	.	-	0	Parent=FBgn0085442.2.mrna1;Target=FBgn0085442.2 1 121 +
Chr2	stalkie_big_nohaplotig	mRNA	63168545	63170303	.	+	.	ID=comp156910_c2_seq1.mrna1;geneID=comp156910_c2_seq1.path1;Name=comp156910_c2_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1758;mismatches=1;indels=0;unknowns=0;Target=comp156910_c2_seq1 1761 3 .;CDS_Target=comp156910_c2_seq1 915 796 .;locus=RLOC_00017914
Chr2	stalkie_big_nohaplotig	exon	63168545	63170303	99	+	.	Parent=comp156910_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	63169338	63169457	.	+	0	Parent=comp156910_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65130313	65131933	.	-	.	ID=FBgn0027538.1.mrna1;geneID=FBgn0027538.1.path1;Name=FBgn0027538.1;Dir=sensecoverage=100.0;identity=100.0;matches=1227;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017914
Chr2	stalkie_big_nohaplotig	exon	65130313	65130451	100	-	.	Parent=FBgn0027538.1.mrna1;Target=FBgn0027538.1 1089 1227 +
Chr2	stalkie_big_nohaplotig	exon	65130508	65130603	100	-	.	Parent=FBgn0027538.1.mrna1;Target=FBgn0027538.1 993 1088 +
Chr2	stalkie_big_nohaplotig	exon	65130786	65130908	100	-	.	Parent=FBgn0027538.1.mrna1;Target=FBgn0027538.1 870 992 +
Chr2	stalkie_big_nohaplotig	exon	65130962	65131385	100	-	.	Parent=FBgn0027538.1.mrna1;Target=FBgn0027538.1 446 869 +
Chr2	stalkie_big_nohaplotig	exon	65131444	65131688	100	-	.	Parent=FBgn0027538.1.mrna1;Target=FBgn0027538.1 201 445 +
Chr2	stalkie_big_nohaplotig	exon	65131734	65131933	100	-	.	Parent=FBgn0027538.1.mrna1;Target=FBgn0027538.1 1 200 +
Chr2	stalkie_big_nohaplotig	CDS	65130313	65130451	.	-	1	Parent=FBgn0027538.1.mrna1;Target=FBgn0027538.1 1089 1227 +
Chr2	stalkie_big_nohaplotig	CDS	65130508	65130603	.	-	1	Parent=FBgn0027538.1.mrna1;Target=FBgn0027538.1 993 1088 +
Chr2	stalkie_big_nohaplotig	CDS	65130786	65130908	.	-	1	Parent=FBgn0027538.1.mrna1;Target=FBgn0027538.1 870 992 +
Chr2	stalkie_big_nohaplotig	CDS	65130962	65131385	.	-	2	Parent=FBgn0027538.1.mrna1;Target=FBgn0027538.1 446 869 +
Chr2	stalkie_big_nohaplotig	CDS	65131444	65131688	.	-	1	Parent=FBgn0027538.1.mrna1;Target=FBgn0027538.1 201 445 +
Chr2	stalkie_big_nohaplotig	CDS	65131734	65131933	.	-	0	Parent=FBgn0027538.1.mrna1;Target=FBgn0027538.1 1 200 +
Chr2	gffcl	locus	63170427	63184556	.	-	.	ID=RLOC_00017915;geneIDs=FBgn0085442.1.path1;transcripts=FBgn0085442.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63170427	63184556	.	-	.	ID=FBgn0085442.1.mrna1;geneID=FBgn0085442.1.path1;Name=FBgn0085442.1;Dir=sensecoverage=96.2;identity=100.0;matches=2442;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017915
Chr2	stalkie_big_nohaplotig	exon	63170427	63172390	100	-	.	Parent=FBgn0085442.1.mrna1;Target=FBgn0085442.1 575 2538 +
Chr2	stalkie_big_nohaplotig	exon	63177559	63177619	100	-	.	Parent=FBgn0085442.1.mrna1;Target=FBgn0085442.1 514 574 +
Chr2	stalkie_big_nohaplotig	exon	63177675	63177872	100	-	.	Parent=FBgn0085442.1.mrna1;Target=FBgn0085442.1 316 513 +
Chr2	stalkie_big_nohaplotig	exon	63177944	63178024	100	-	.	Parent=FBgn0085442.1.mrna1;Target=FBgn0085442.1 235 315 +
Chr2	stalkie_big_nohaplotig	exon	63184419	63184556	100	-	.	Parent=FBgn0085442.1.mrna1;Target=FBgn0085442.1 97 234 +
Chr2	stalkie_big_nohaplotig	CDS	63170427	63172390	.	-	2	Parent=FBgn0085442.1.mrna1;Target=FBgn0085442.1 575 2538 +
Chr2	stalkie_big_nohaplotig	CDS	63177559	63177619	.	-	0	Parent=FBgn0085442.1.mrna1;Target=FBgn0085442.1 514 574 +
Chr2	stalkie_big_nohaplotig	CDS	63177675	63177872	.	-	0	Parent=FBgn0085442.1.mrna1;Target=FBgn0085442.1 316 513 +
Chr2	stalkie_big_nohaplotig	CDS	63177944	63178024	.	-	0	Parent=FBgn0085442.1.mrna1;Target=FBgn0085442.1 235 315 +
Chr2	stalkie_big_nohaplotig	CDS	63184419	63184556	.	-	0	Parent=FBgn0085442.1.mrna1;Target=FBgn0085442.1 97 234 +
Chr2	gffcl	locus	63223616	63226464	.	+	.	ID=RLOC_00017916;geneIDs=comp143624_c0_seq1.path1;transcripts=comp143624_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63223616	63226464	.	+	.	ID=comp143624_c0_seq1.mrna1;geneID=comp143624_c0_seq1.path1;Name=comp143624_c0_seq1;Dir=antisensecoverage=99.6;identity=97.7;matches=732;mismatches=17;indels=0;unknowns=0;Target=comp143624_c0_seq1 157 390 .;locus=RLOC_00017916
Chr2	stalkie_big_nohaplotig	exon	63223616	63223727	96	+	.	Parent=comp143624_c0_seq1.mrna1;Target=comp143624_c0_seq1 640 751 -
Chr2	stalkie_big_nohaplotig	exon	63225828	63226464	97	+	.	Parent=comp143624_c0_seq1.mrna1;Target=comp143624_c0_seq1 3 639 -
Chr2	stalkie_big_nohaplotig	CDS	63226077	63226310	.	+	0	Parent=comp143624_c0_seq1.mrna1
Chr2	gffcl	locus	63241634	63248560	.	-	.	ID=RLOC_00017917;geneIDs=FBgn0033749.1.path1,comp158145_c1_seq1.path1;transcripts=comp158145_c1_seq1.mrna1,FBgn0033749.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63241634	63248560	.	-	.	ID=comp158145_c1_seq1.mrna1;geneID=comp158145_c1_seq1.path1;Name=comp158145_c1_seq1;Dir=antisensecoverage=99.9;identity=99.7;matches=3065;mismatches=9;indels=0;unknowns=0;locus=RLOC_00017917
Chr2	stalkie_big_nohaplotig	exon	63241634	63242298	99	-	.	Parent=comp158145_c1_seq1.mrna1;Target=comp158145_c1_seq1 5 669 -
Chr2	stalkie_big_nohaplotig	exon	63242367	63242639	100	-	.	Parent=comp158145_c1_seq1.mrna1;Target=comp158145_c1_seq1 670 942 -
Chr2	stalkie_big_nohaplotig	exon	63243852	63243967	100	-	.	Parent=comp158145_c1_seq1.mrna1;Target=comp158145_c1_seq1 943 1058 -
Chr2	stalkie_big_nohaplotig	exon	63244198	63244296	100	-	.	Parent=comp158145_c1_seq1.mrna1;Target=comp158145_c1_seq1 1059 1157 -
Chr2	stalkie_big_nohaplotig	exon	63245889	63246034	100	-	.	Parent=comp158145_c1_seq1.mrna1;Target=comp158145_c1_seq1 1158 1303 -
Chr2	stalkie_big_nohaplotig	exon	63246105	63246290	100	-	.	Parent=comp158145_c1_seq1.mrna1;Target=comp158145_c1_seq1 1304 1489 -
Chr2	stalkie_big_nohaplotig	exon	63246353	63246717	100	-	.	Parent=comp158145_c1_seq1.mrna1;Target=comp158145_c1_seq1 1490 1854 -
Chr2	stalkie_big_nohaplotig	exon	63247132	63247311	100	-	.	Parent=comp158145_c1_seq1.mrna1;Target=comp158145_c1_seq1 1855 2034 -
Chr2	stalkie_big_nohaplotig	exon	63247517	63248560	99	-	.	Parent=comp158145_c1_seq1.mrna1;Target=comp158145_c1_seq1 2035 3078 -
Chr2	stalkie_big_nohaplotig	CDS	63242180	63242298	.	-	2	Parent=comp158145_c1_seq1.mrna1;Target=comp158145_c1_seq1 551 669 .
Chr2	stalkie_big_nohaplotig	CDS	63242367	63242639	.	-	2	Parent=comp158145_c1_seq1.mrna1;Target=comp158145_c1_seq1 670 942 .
Chr2	stalkie_big_nohaplotig	CDS	63243852	63243967	.	-	1	Parent=comp158145_c1_seq1.mrna1;Target=comp158145_c1_seq1 943 1058 .
Chr2	stalkie_big_nohaplotig	CDS	63244198	63244296	.	-	1	Parent=comp158145_c1_seq1.mrna1;Target=comp158145_c1_seq1 1059 1157 .
Chr2	stalkie_big_nohaplotig	CDS	63245889	63246034	.	-	0	Parent=comp158145_c1_seq1.mrna1;Target=comp158145_c1_seq1 1158 1303 .
Chr2	stalkie_big_nohaplotig	CDS	63246105	63246290	.	-	0	Parent=comp158145_c1_seq1.mrna1;Target=comp158145_c1_seq1 1304 1489 .
Chr2	stalkie_big_nohaplotig	CDS	63246353	63246717	.	-	2	Parent=comp158145_c1_seq1.mrna1;Target=comp158145_c1_seq1 1490 1854 .
Chr2	stalkie_big_nohaplotig	CDS	63247132	63247255	.	-	0	Parent=comp158145_c1_seq1.mrna1;Target=comp158145_c1_seq1 1855 1978 .
Chr2	stalkie_big_nohaplotig	mRNA	63245497	63247282	.	-	.	ID=FBgn0033749.1.mrna1;geneID=FBgn0033749.1.path1;Name=FBgn0033749.1;Dir=sensecoverage=100.0;identity=99.9;matches=1160;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017917
Chr2	stalkie_big_nohaplotig	exon	63245497	63245809	99	-	.	Parent=FBgn0033749.1.mrna1;Target=FBgn0033749.1 849 1161 +
Chr2	stalkie_big_nohaplotig	exon	63245889	63246034	100	-	.	Parent=FBgn0033749.1.mrna1;Target=FBgn0033749.1 703 848 +
Chr2	stalkie_big_nohaplotig	exon	63246105	63246290	100	-	.	Parent=FBgn0033749.1.mrna1;Target=FBgn0033749.1 517 702 +
Chr2	stalkie_big_nohaplotig	exon	63246353	63246717	100	-	.	Parent=FBgn0033749.1.mrna1;Target=FBgn0033749.1 152 516 +
Chr2	stalkie_big_nohaplotig	exon	63247132	63247282	100	-	.	Parent=FBgn0033749.1.mrna1;Target=FBgn0033749.1 1 151 +
Chr2	stalkie_big_nohaplotig	CDS	63245497	63245809	.	-	1	Parent=FBgn0033749.1.mrna1;Target=FBgn0033749.1 849 1161 +
Chr2	stalkie_big_nohaplotig	CDS	63245889	63246034	.	-	0	Parent=FBgn0033749.1.mrna1;Target=FBgn0033749.1 703 848 +
Chr2	stalkie_big_nohaplotig	CDS	63246105	63246290	.	-	0	Parent=FBgn0033749.1.mrna1;Target=FBgn0033749.1 517 702 +
Chr2	stalkie_big_nohaplotig	CDS	63246353	63246717	.	-	2	Parent=FBgn0033749.1.mrna1;Target=FBgn0033749.1 152 516 +
Chr2	stalkie_big_nohaplotig	CDS	63247132	63247282	.	-	0	Parent=FBgn0033749.1.mrna1;Target=FBgn0033749.1 1 151 +
Chr2	gffcl	locus	63260493	63261595	.	+	.	ID=RLOC_00017918;geneIDs=ORF2975.path1;transcripts=ORF2975.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63260493	63261595	.	+	.	ID=ORF2975.mrna1;geneID=ORF2975.path1;Name=ORF2975;Dir=sensecoverage=99.7;identity=99.5;matches=777;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017918
Chr2	stalkie_big_nohaplotig	exon	63260493	63260546	98	+	.	Parent=ORF2975.mrna1;Target=ORF2975 3 56 +
Chr2	stalkie_big_nohaplotig	exon	63260695	63260727	96	+	.	Parent=ORF2975.mrna1;Target=ORF2975 57 89 +
Chr2	stalkie_big_nohaplotig	exon	63260788	63261000	99	+	.	Parent=ORF2975.mrna1;Target=ORF2975 90 302 +
Chr2	stalkie_big_nohaplotig	exon	63261054	63261181	100	+	.	Parent=ORF2975.mrna1;Target=ORF2975 303 430 +
Chr2	stalkie_big_nohaplotig	exon	63261243	63261595	100	+	.	Parent=ORF2975.mrna1;Target=ORF2975 431 783 +
Chr2	stalkie_big_nohaplotig	CDS	63260720	63260727	.	+	0	Parent=ORF2975.mrna1;Target=ORF2975 82 89 +
Chr2	stalkie_big_nohaplotig	CDS	63260788	63261000	.	+	1	Parent=ORF2975.mrna1;Target=ORF2975 90 302 +
Chr2	stalkie_big_nohaplotig	CDS	63261054	63261181	.	+	1	Parent=ORF2975.mrna1;Target=ORF2975 303 430 +
Chr2	stalkie_big_nohaplotig	CDS	63261243	63261595	.	+	2	Parent=ORF2975.mrna1;Target=ORF2975 431 783 +
Chr2	gffcl	locus	63261777	63262420	.	-	.	ID=RLOC_00017919;geneIDs=comp163035_c1_seq1.path1;transcripts=comp163035_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63261777	63262420	.	-	.	ID=comp163035_c1_seq1.mrna1;geneID=comp163035_c1_seq1.path1;Name=comp163035_c1_seq1;Dir=sensecoverage=21.2;identity=97.3;matches=572;mismatches=14;indels=2;unknowns=0;Target=comp163035_c1_seq1 2411 2551 +;locus=RLOC_00017919
Chr2	stalkie_big_nohaplotig	exon	63261777	63262261	97	-	.	Parent=comp163035_c1_seq1.mrna1;Target=comp163035_c1_seq1 2285 2769 +
Chr2	stalkie_big_nohaplotig	exon	63262318	63262420	96	-	.	Parent=comp163035_c1_seq1.mrna1;Target=comp163035_c1_seq1 2184 2284 +
Chr2	stalkie_big_nohaplotig	CDS	63261995	63262135	.	-	0	Parent=comp163035_c1_seq1.mrna1
Chr2	gffcl	locus	63269485	63270570	.	-	.	ID=RLOC_00017920;geneIDs=FBgn0037239.2.path1;transcripts=FBgn0037239.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63269485	63270570	.	-	.	ID=FBgn0037239.2.mrna1;geneID=FBgn0037239.2.path1;Name=FBgn0037239.2;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1085;mismatches=1;indels=0;unknowns=0;Target=FBgn0037239.2 1086 1 .;locus=RLOC_00017920
Chr2	stalkie_big_nohaplotig	exon	63269485	63270570	99	-	.	Parent=FBgn0037239.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	63269485	63270570	.	-	0	Parent=FBgn0037239.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63281225	65058407	.	-	.	ID=comp163316_c1_seq1.mrna1;geneID=comp163316_c1_seq1.path1;Name=comp163316_c1_seq1;Dir=sensecoverage=88.9;identity=96.7;matches=6895;mismatches=79;indels=153;unknowns=0;locus=RLOC_00017921
Chr2	stalkie_big_nohaplotig	exon	63281225	63281227	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 11138 11140 +
Chr2	stalkie_big_nohaplotig	exon	63285436	63285437	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 11136 11137 +
Chr2	stalkie_big_nohaplotig	exon	63287739	63287746	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 11128 11135 +
Chr2	stalkie_big_nohaplotig	exon	63298521	63298529	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 11105 11113 +
Chr2	stalkie_big_nohaplotig	exon	63303350	63303353	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 11101 11104 +
Chr2	stalkie_big_nohaplotig	exon	63305469	63305508	40	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 11085 11100 +
Chr2	stalkie_big_nohaplotig	exon	63308317	63308319	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 11082 11084 +
Chr2	stalkie_big_nohaplotig	exon	63311954	63311958	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 11077 11081 +
Chr2	stalkie_big_nohaplotig	exon	63312270	63312275	83	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 11071 11076 +
Chr2	stalkie_big_nohaplotig	exon	63323346	63323349	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 11067 11070 +
Chr2	stalkie_big_nohaplotig	exon	63331386	63331392	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 11060 11066 +
Chr2	stalkie_big_nohaplotig	exon	63337640	63337647	75	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 11052 11059 +
Chr2	stalkie_big_nohaplotig	exon	63345674	63345688	86	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 11037 11051 +
Chr2	stalkie_big_nohaplotig	exon	63353462	63353468	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 11030 11036 +
Chr2	stalkie_big_nohaplotig	exon	63358830	63358831	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 11028 11029 +
Chr2	stalkie_big_nohaplotig	exon	63365153	63365158	83	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 11022 11027 +
Chr2	stalkie_big_nohaplotig	exon	63371020	63371021	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 11020 11021 +
Chr2	stalkie_big_nohaplotig	exon	63376894	63376900	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 11013 11019 +
Chr2	stalkie_big_nohaplotig	exon	63383512	63383516	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 11008 11012 +
Chr2	stalkie_big_nohaplotig	exon	63397022	63397044	65	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 10986 11007 +
Chr2	stalkie_big_nohaplotig	exon	63411938	63411942	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 10981 10985 +
Chr2	stalkie_big_nohaplotig	exon	63418824	63418828	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 10976 10980 +
Chr2	stalkie_big_nohaplotig	exon	63424780	63424790	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 10965 10975 +
Chr2	stalkie_big_nohaplotig	exon	63425249	63425251	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 10962 10964 +
Chr2	stalkie_big_nohaplotig	exon	63426082	63426084	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 10959 10961 +
Chr2	stalkie_big_nohaplotig	exon	63430854	63430855	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 10957 10958 +
Chr2	stalkie_big_nohaplotig	exon	63435345	63435347	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 10954 10956 +
Chr2	stalkie_big_nohaplotig	exon	63442607	63442611	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 10949 10953 +
Chr2	stalkie_big_nohaplotig	exon	63446335	63446367	51	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 10918 10948 +
Chr2	stalkie_big_nohaplotig	exon	63483091	63483097	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 10911 10917 +
Chr2	stalkie_big_nohaplotig	exon	63488170	63488173	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 10907 10910 +
Chr2	stalkie_big_nohaplotig	exon	63494635	63494640	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 10901 10906 +
Chr2	stalkie_big_nohaplotig	exon	63494749	63494770	68	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 10883 10900 +
Chr2	stalkie_big_nohaplotig	exon	63494947	63495118	34	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 10805 10882 +
Chr2	stalkie_big_nohaplotig	exon	63495184	63495191	62	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 10798 10804 +
Chr2	stalkie_big_nohaplotig	exon	63504243	63504253	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 10492 10502 +
Chr2	stalkie_big_nohaplotig	exon	63507930	63507937	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 10484 10491 +
Chr2	stalkie_big_nohaplotig	exon	63510501	63510510	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 10474 10483 +
Chr2	stalkie_big_nohaplotig	exon	63519934	63519939	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 9733 9738 +
Chr2	stalkie_big_nohaplotig	exon	63519945	63519952	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 9715 9722 +
Chr2	stalkie_big_nohaplotig	exon	63524756	63524761	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 9709 9714 +
Chr2	stalkie_big_nohaplotig	exon	63531832	63531848	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 8819 8835 +
Chr2	stalkie_big_nohaplotig	exon	63533863	63533864	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 8817 8818 +
Chr2	stalkie_big_nohaplotig	exon	63536363	63536394	66	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 7588 7619 +
Chr2	stalkie_big_nohaplotig	exon	63541347	63541351	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 7583 7587 +
Chr2	stalkie_big_nohaplotig	exon	63542886	63542890	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 7578 7582 +
Chr2	stalkie_big_nohaplotig	exon	63543516	63543525	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 7568 7577 +
Chr2	stalkie_big_nohaplotig	exon	63547198	63547203	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 7562 7567 +
Chr2	stalkie_big_nohaplotig	exon	63547761	63547766	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 7556 7561 +
Chr2	stalkie_big_nohaplotig	exon	63578125	63578194	47	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 7507 7555 +
Chr2	stalkie_big_nohaplotig	exon	63578389	63578394	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 7501 7506 +
Chr2	stalkie_big_nohaplotig	exon	63586484	63586485	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 7499 7500 +
Chr2	stalkie_big_nohaplotig	exon	63590591	63590595	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 7494 7498 +
Chr2	stalkie_big_nohaplotig	exon	63597529	63597533	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 7489 7493 +
Chr2	stalkie_big_nohaplotig	exon	63600725	63600729	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 7484 7488 +
Chr2	stalkie_big_nohaplotig	exon	63622883	63622889	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 7477 7483 +
Chr2	stalkie_big_nohaplotig	exon	63629675	63629676	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 7475 7476 +
Chr2	stalkie_big_nohaplotig	exon	63633615	63633618	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 7471 7474 +
Chr2	stalkie_big_nohaplotig	exon	65050084	65050439	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 7115 7470 +
Chr2	stalkie_big_nohaplotig	exon	65050508	65050637	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 6985 7114 +
Chr2	stalkie_big_nohaplotig	exon	65050699	65051119	100	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 6564 6984 +
Chr2	stalkie_big_nohaplotig	exon	65051721	65054746	99	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 3537 6563 +
Chr2	stalkie_big_nohaplotig	exon	65055915	65058407	99	-	.	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 1041 3536 +
Chr2	stalkie_big_nohaplotig	CDS	65051772	65054746	.	-	0	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 3537 6512 +
Chr2	stalkie_big_nohaplotig	CDS	65055915	65058407	.	-	0	Parent=comp163316_c1_seq1.mrna1;Target=comp163316_c1_seq1 1041 3536 +
Chr2	stalkie_big_nohaplotig	mRNA	63481853	63483484	.	-	.	ID=ORF585.mrna8;geneID=ORF585.path8;Name=ORF585;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1621;mismatches=11;indels=6;unknowns=0;Target=ORF585 1638 1 .;CDS_Target=ORF585 1638 946 .;locus=RLOC_00017921
Chr2	stalkie_big_nohaplotig	exon	63481853	63483484	98	-	.	Parent=ORF585.mrna8
Chr2	stalkie_big_nohaplotig	CDS	63481853	63482544	.	-	0	Parent=ORF585.mrna8
Chr2	stalkie_big_nohaplotig	mRNA	65051775	65066166	.	-	.	ID=FBgn0013756.1.mrna1;geneID=FBgn0013756.1.path1;Name=FBgn0013756.1;Dir=sensecoverage=100.0;identity=99.9;matches=6282;mismatches=5;indels=4;unknowns=0;locus=RLOC_00017921
Chr2	stalkie_big_nohaplotig	exon	65051775	65054746	99	-	.	Parent=FBgn0013756.1.mrna1;Target=FBgn0013756.1 3319 6291 +
Chr2	stalkie_big_nohaplotig	exon	65055915	65059060	99	-	.	Parent=FBgn0013756.1.mrna1;Target=FBgn0013756.1 170 3318 +
Chr2	stalkie_big_nohaplotig	exon	65065998	65066166	100	-	.	Parent=FBgn0013756.1.mrna1;Target=FBgn0013756.1 1 169 +
Chr2	stalkie_big_nohaplotig	CDS	65051775	65054746	.	-	0	Parent=FBgn0013756.1.mrna1;Target=FBgn0013756.1 3319 6291 +
Chr2	stalkie_big_nohaplotig	CDS	65055915	65059060	.	-	2	Parent=FBgn0013756.1.mrna1;Target=FBgn0013756.1 170 3318 +
Chr2	stalkie_big_nohaplotig	CDS	65065998	65066166	.	-	0	Parent=FBgn0013756.1.mrna1;Target=FBgn0013756.1 1 169 +
Chr2	gffcl	locus	63300909	63329449	.	+	.	ID=RLOC_00017923;geneIDs=comp154221_c0_seq1.path1;transcripts=comp154221_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63300909	63329449	.	+	.	ID=comp154221_c0_seq1.mrna1;geneID=comp154221_c0_seq1.path1;Name=comp154221_c0_seq1;Dir=antisensecoverage=90.9;identity=98.5;matches=1012;mismatches=10;indels=5;unknowns=0;Target=comp154221_c0_seq1 826 993 .;locus=RLOC_00017923
Chr2	stalkie_big_nohaplotig	exon	63300909	63301917	98	+	.	Parent=comp154221_c0_seq1.mrna1;Target=comp154221_c0_seq1 133 1146 -
Chr2	stalkie_big_nohaplotig	exon	63304215	63304217	100	+	.	Parent=comp154221_c0_seq1.mrna1;Target=comp154221_c0_seq1 114 116 -
Chr2	stalkie_big_nohaplotig	exon	63329441	63329449	88	+	.	Parent=comp154221_c0_seq1.mrna1;Target=comp154221_c0_seq1 105 113 -
Chr2	stalkie_big_nohaplotig	CDS	63301062	63301229	.	+	0	Parent=comp154221_c0_seq1.mrna1
Chr2	gffcl	locus	63301978	63302474	.	+	.	ID=RLOC_00017924;geneIDs=comp140509_c0_seq1.path1;transcripts=comp140509_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63301978	63302474	.	+	.	ID=comp140509_c0_seq1.mrna1;geneID=comp140509_c0_seq1.path1;Name=comp140509_c0_seq1;Dir=indeterminatecoverage=97.1;identity=100.0;matches=497;mismatches=0;indels=0;unknowns=0;Target=comp140509_c0_seq1 512 16 .;CDS_Target=comp140509_c0_seq1 345 241 .;locus=RLOC_00017924
Chr2	stalkie_big_nohaplotig	exon	63301978	63302474	100	+	.	Parent=comp140509_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	63302203	63302307	.	+	0	Parent=comp140509_c0_seq1.mrna1
Chr2	gffcl	locus	63302652	63303000	.	+	.	ID=RLOC_00017925;geneIDs=comp145242_c0_seq1.path1;transcripts=comp145242_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63302652	63303000	.	+	.	ID=comp145242_c0_seq1.mrna1;geneID=comp145242_c0_seq1.path1;Name=comp145242_c0_seq1;Dir=indeterminatecoverage=88.1;identity=99.1;matches=346;mismatches=3;indels=0;unknowns=0;Target=comp145242_c0_seq1 396 48 .;CDS_Target=comp145242_c0_seq1 124 50 .;locus=RLOC_00017925
Chr2	stalkie_big_nohaplotig	exon	63302652	63303000	99	+	.	Parent=comp145242_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	63302654	63302728	.	+	0	Parent=comp145242_c0_seq1.mrna1
Chr2	gffcl	locus	63337825	63904579	.	+	.	ID=RLOC_00017927;geneIDs=comp159860_c1_seq1.path1;transcripts=comp159860_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63337825	63904579	.	+	.	ID=comp159860_c1_seq1.mrna1;geneID=comp159860_c1_seq1.path1;Name=comp159860_c1_seq1;Dir=antisensecoverage=94.9;identity=99.8;matches=1252;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017927
Chr2	stalkie_big_nohaplotig	exon	63337825	63338392	99	+	.	Parent=comp159860_c1_seq1.mrna1;Target=comp159860_c1_seq1 687 1254 -
Chr2	stalkie_big_nohaplotig	exon	63903894	63904579	99	+	.	Parent=comp159860_c1_seq1.mrna1;Target=comp159860_c1_seq1 1 686 -
Chr2	stalkie_big_nohaplotig	CDS	63338279	63338392	.	+	0	Parent=comp159860_c1_seq1.mrna1;Target=comp159860_c1_seq1 687 800 .
Chr2	stalkie_big_nohaplotig	CDS	63903894	63904577	.	+	0	Parent=comp159860_c1_seq1.mrna1;Target=comp159860_c1_seq1 3 686 .
Chr2	gffcl	locus	63412329	63414454	.	-	.	ID=RLOC_00017928;geneIDs=comp158098_c0_seq1.path2;transcripts=comp158098_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	63412329	63414454	.	-	.	ID=comp158098_c0_seq1.mrna2;geneID=comp158098_c0_seq1.path2;Name=comp158098_c0_seq1;Dir=sensecoverage=96.1;identity=98.5;matches=1975;mismatches=18;indels=12;unknowns=0;Target=comp158098_c0_seq1 263 430 +;locus=RLOC_00017928
Chr2	stalkie_big_nohaplotig	exon	63412329	63414187	99	-	.	Parent=comp158098_c0_seq1.mrna2;Target=comp158098_c0_seq1 228 2080 +
Chr2	stalkie_big_nohaplotig	exon	63414314	63414454	91	-	.	Parent=comp158098_c0_seq1.mrna2;Target=comp158098_c0_seq1 83 227 +
Chr2	stalkie_big_nohaplotig	CDS	63413985	63414152	.	-	0	Parent=comp158098_c0_seq1.mrna2
Chr2	gffcl	locus	63428945	63429875	.	-	.	ID=RLOC_00017929;geneIDs=comp106579_c0_seq1.path1;transcripts=comp106579_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63428945	63429875	.	-	.	ID=comp106579_c0_seq1.mrna1;geneID=comp106579_c0_seq1.path1;Name=comp106579_c0_seq1;Dir=sensecoverage=99.9;identity=96.5;matches=836;mismatches=14;indels=16;unknowns=0;Target=comp106579_c0_seq1 353 415 +;locus=RLOC_00017929
Chr2	stalkie_big_nohaplotig	exon	63428945	63429469	95	-	.	Parent=comp106579_c0_seq1.mrna1;Target=comp106579_c0_seq1 342 850 +
Chr2	stalkie_big_nohaplotig	exon	63429535	63429875	97	-	.	Parent=comp106579_c0_seq1.mrna1;Target=comp106579_c0_seq1 1 341 +
Chr2	stalkie_big_nohaplotig	CDS	63429380	63429458	.	-	0	Parent=comp106579_c0_seq1.mrna1
Chr2	gffcl	locus	63463267	63465558	.	+	.	ID=RLOC_00017930;geneIDs=ORF281.path1;transcripts=ORF281.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63463267	63465558	.	+	.	ID=ORF281.mrna1;geneID=ORF281.path1;Name=ORF281;Dir=sensecoverage=99.9;identity=99.8;matches=2149;mismatches=5;indels=0;unknowns=0;locus=RLOC_00017930
Chr2	stalkie_big_nohaplotig	exon	63463267	63464581	99	+	.	Parent=ORF281.mrna1;Target=ORF281 4 1318 +
Chr2	stalkie_big_nohaplotig	exon	63464720	63465558	99	+	.	Parent=ORF281.mrna1;Target=ORF281 1319 2157 +
Chr2	stalkie_big_nohaplotig	CDS	63463267	63464581	.	+	0	Parent=ORF281.mrna1;Target=ORF281 4 1318 +
Chr2	stalkie_big_nohaplotig	CDS	63464720	63465558	.	+	2	Parent=ORF281.mrna1;Target=ORF281 1319 2157 +
Chr2	gffcl	locus	63577663	63577984	.	+	.	ID=RLOC_00017931;geneIDs=comp145203_c0_seq1.path1;transcripts=comp145203_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63577663	63577984	.	+	.	ID=comp145203_c0_seq1.mrna1;geneID=comp145203_c0_seq1.path1;Name=comp145203_c0_seq1;Dir=indeterminatecoverage=98.2;identity=100.0;matches=322;mismatches=0;indels=0;unknowns=0;Target=comp145203_c0_seq1 324 3 .;CDS_Target=comp145203_c0_seq1 120 4 .;locus=RLOC_00017931
Chr2	stalkie_big_nohaplotig	exon	63577663	63577984	100	+	.	Parent=comp145203_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	63577664	63577780	.	+	0	Parent=comp145203_c0_seq1.mrna1
Chr2	gffcl	locus	63607512	63608323	.	-	.	ID=RLOC_00017932;geneIDs=ORF3202.path1;transcripts=ORF3202.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63607512	63608323	.	-	.	ID=ORF3202.mrna1;geneID=ORF3202.path1;Name=ORF3202;Dir=sensecoverage=100.0;identity=99.5;matches=752;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017932
Chr2	stalkie_big_nohaplotig	exon	63607512	63608188	99	-	.	Parent=ORF3202.mrna1;Target=ORF3202 80 756 +
Chr2	stalkie_big_nohaplotig	exon	63608245	63608323	100	-	.	Parent=ORF3202.mrna1;Target=ORF3202 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	63607512	63608188	.	-	2	Parent=ORF3202.mrna1;Target=ORF3202 80 756 +
Chr2	stalkie_big_nohaplotig	CDS	63608245	63608323	.	-	0	Parent=ORF3202.mrna1;Target=ORF3202 1 79 +
Chr2	gffcl	locus	63616242	63617641	.	-	.	ID=RLOC_00017933;geneIDs=FBgn0033751.1.path1;transcripts=FBgn0033751.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63616242	63617641	.	-	.	ID=FBgn0033751.1.mrna1;geneID=FBgn0033751.1.path1;Name=FBgn0033751.1;Dir=sensecoverage=100.0;identity=99.4;matches=1270;mismatches=8;indels=0;unknowns=0;locus=RLOC_00017933
Chr2	stalkie_big_nohaplotig	exon	63616242	63616435	98	-	.	Parent=FBgn0033751.1.mrna1;Target=FBgn0033751.1 1085 1278 +
Chr2	stalkie_big_nohaplotig	exon	63616501	63616634	99	-	.	Parent=FBgn0033751.1.mrna1;Target=FBgn0033751.1 951 1084 +
Chr2	stalkie_big_nohaplotig	exon	63616692	63617641	99	-	.	Parent=FBgn0033751.1.mrna1;Target=FBgn0033751.1 1 950 +
Chr2	stalkie_big_nohaplotig	CDS	63616242	63616435	.	-	2	Parent=FBgn0033751.1.mrna1;Target=FBgn0033751.1 1085 1278 +
Chr2	stalkie_big_nohaplotig	CDS	63616501	63616634	.	-	1	Parent=FBgn0033751.1.mrna1;Target=FBgn0033751.1 951 1084 +
Chr2	stalkie_big_nohaplotig	CDS	63616692	63617641	.	-	0	Parent=FBgn0033751.1.mrna1;Target=FBgn0033751.1 1 950 +
Chr2	gffcl	locus	63619145	63632809	.	+	.	ID=RLOC_00017934;geneIDs=FBgn0021953.2.path1;transcripts=FBgn0021953.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63619145	63632809	.	+	.	ID=FBgn0021953.2.mrna1;geneID=FBgn0021953.2.path1;Name=FBgn0021953.2;Dir=sensecoverage=100.0;identity=99.2;matches=1880;mismatches=16;indels=0;unknowns=0;locus=RLOC_00017934
Chr2	stalkie_big_nohaplotig	exon	63619145	63619278	99	+	.	Parent=FBgn0021953.2.mrna1;Target=FBgn0021953.2 1 134 +
Chr2	stalkie_big_nohaplotig	exon	63629596	63630216	98	+	.	Parent=FBgn0021953.2.mrna1;Target=FBgn0021953.2 135 755 +
Chr2	stalkie_big_nohaplotig	exon	63631588	63631789	98	+	.	Parent=FBgn0021953.2.mrna1;Target=FBgn0021953.2 756 957 +
Chr2	stalkie_big_nohaplotig	exon	63631871	63632809	99	+	.	Parent=FBgn0021953.2.mrna1;Target=FBgn0021953.2 958 1896 +
Chr2	stalkie_big_nohaplotig	CDS	63619145	63619278	.	+	0	Parent=FBgn0021953.2.mrna1;Target=FBgn0021953.2 1 134 +
Chr2	stalkie_big_nohaplotig	CDS	63629596	63630216	.	+	1	Parent=FBgn0021953.2.mrna1;Target=FBgn0021953.2 135 755 +
Chr2	stalkie_big_nohaplotig	CDS	63631588	63631789	.	+	1	Parent=FBgn0021953.2.mrna1;Target=FBgn0021953.2 756 957 +
Chr2	stalkie_big_nohaplotig	CDS	63631871	63632809	.	+	0	Parent=FBgn0021953.2.mrna1;Target=FBgn0021953.2 958 1896 +
Chr2	stalkie_big_nohaplotig	mRNA	65271034	65272632	.	+	.	ID=comp150399_c0_seq1.mrna1;geneID=comp150399_c0_seq1.path1;Name=comp150399_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1599;mismatches=0;indels=0;unknowns=0;Target=comp150399_c0_seq1 1599 1 .;CDS_Target=comp150399_c0_seq1 1439 1179 .;locus=RLOC_00017935
Chr2	stalkie_big_nohaplotig	exon	65271034	65272632	100	+	.	Parent=comp150399_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65272212	65272472	.	+	0	Parent=comp150399_c0_seq1.mrna1
Chr2	gffcl	locus	63635565	63636568	.	+	.	ID=RLOC_00017936;geneIDs=comp152646_c0_seq1.path1;transcripts=comp152646_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63635565	63636568	.	+	.	ID=comp152646_c0_seq1.mrna1;geneID=comp152646_c0_seq1.path1;Name=comp152646_c0_seq1;Dir=sensecoverage=97.0;identity=99.4;matches=890;mismatches=3;indels=2;unknowns=0;locus=RLOC_00017936
Chr2	stalkie_big_nohaplotig	exon	63635565	63635893	98	+	.	Parent=comp152646_c0_seq1.mrna1;Target=comp152646_c0_seq1 29 355 +
Chr2	stalkie_big_nohaplotig	exon	63635946	63636119	99	+	.	Parent=comp152646_c0_seq1.mrna1;Target=comp152646_c0_seq1 356 529 +
Chr2	stalkie_big_nohaplotig	exon	63636177	63636568	100	+	.	Parent=comp152646_c0_seq1.mrna1;Target=comp152646_c0_seq1 530 921 +
Chr2	stalkie_big_nohaplotig	CDS	63635672	63635893	.	+	0	Parent=comp152646_c0_seq1.mrna1;Target=comp152646_c0_seq1 134 355 +
Chr2	stalkie_big_nohaplotig	CDS	63635946	63636119	.	+	0	Parent=comp152646_c0_seq1.mrna1;Target=comp152646_c0_seq1 356 529 +
Chr2	stalkie_big_nohaplotig	CDS	63636177	63636437	.	+	0	Parent=comp152646_c0_seq1.mrna1;Target=comp152646_c0_seq1 530 790 +
Chr2	gffcl	locus	63645556	63646269	.	+	.	ID=RLOC_00017937;geneIDs=FBgn0033573.1.path1;transcripts=FBgn0033573.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63645556	63646269	.	+	.	ID=FBgn0033573.1.mrna1;geneID=FBgn0033573.1.path1;Name=FBgn0033573.1;Dir=sensecoverage=100.0;identity=99.8;matches=560;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017937
Chr2	stalkie_big_nohaplotig	exon	63645556	63645672	99	+	.	Parent=FBgn0033573.1.mrna1;Target=FBgn0033573.1 1 117 +
Chr2	stalkie_big_nohaplotig	exon	63645826	63646269	100	+	.	Parent=FBgn0033573.1.mrna1;Target=FBgn0033573.1 118 561 +
Chr2	stalkie_big_nohaplotig	CDS	63645556	63645672	.	+	0	Parent=FBgn0033573.1.mrna1;Target=FBgn0033573.1 1 117 +
Chr2	stalkie_big_nohaplotig	CDS	63645826	63646269	.	+	0	Parent=FBgn0033573.1.mrna1;Target=FBgn0033573.1 118 561 +
Chr2	gffcl	locus	63673959	63694629	.	-	.	ID=RLOC_00017938;geneIDs=comp162467_c0_seq1.path1;transcripts=comp162467_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63673959	63694629	.	-	.	ID=comp162467_c0_seq1.mrna1;geneID=comp162467_c0_seq1.path1;Name=comp162467_c0_seq1;Dir=indeterminatecoverage=74.8;identity=95.9;matches=1831;mismatches=29;indels=50;unknowns=0;Target=comp162467_c0_seq1 2567 2133 .;locus=RLOC_00017938
Chr2	stalkie_big_nohaplotig	exon	63673959	63675699	98	-	.	Parent=comp162467_c0_seq1.mrna1;Target=comp162467_c0_seq1 2624 873 .
Chr2	stalkie_big_nohaplotig	exon	63675895	63675904	100	-	.	Parent=comp162467_c0_seq1.mrna1;Target=comp162467_c0_seq1 849 840 .
Chr2	stalkie_big_nohaplotig	exon	63677121	63677124	100	-	.	Parent=comp162467_c0_seq1.mrna1;Target=comp162467_c0_seq1 839 836 .
Chr2	stalkie_big_nohaplotig	exon	63681365	63681375	90	-	.	Parent=comp162467_c0_seq1.mrna1;Target=comp162467_c0_seq1 835 825 .
Chr2	stalkie_big_nohaplotig	exon	63682250	63682254	100	-	.	Parent=comp162467_c0_seq1.mrna1;Target=comp162467_c0_seq1 824 820 .
Chr2	stalkie_big_nohaplotig	exon	63687306	63687340	52	-	.	Parent=comp162467_c0_seq1.mrna1;Target=comp162467_c0_seq1 814 758 .
Chr2	stalkie_big_nohaplotig	exon	63688157	63688178	41	-	.	Parent=comp162467_c0_seq1.mrna1;Target=comp162467_c0_seq1 757 719 .
Chr2	stalkie_big_nohaplotig	exon	63688880	63688888	100	-	.	Parent=comp162467_c0_seq1.mrna1;Target=comp162467_c0_seq1 692 684 .
Chr2	stalkie_big_nohaplotig	exon	63693221	63693232	75	-	.	Parent=comp162467_c0_seq1.mrna1;Target=comp162467_c0_seq1 683 672 .
Chr2	stalkie_big_nohaplotig	exon	63694619	63694629	100	-	.	Parent=comp162467_c0_seq1.mrna1;Target=comp162467_c0_seq1 671 661 .
Chr2	stalkie_big_nohaplotig	CDS	63674016	63674450	.	-	0	Parent=comp162467_c0_seq1.mrna1
Chr2	gffcl	locus	63747180	63748525	.	-	.	ID=RLOC_00017939;geneIDs=comp156965_c0_seq1.path1;transcripts=comp156965_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63747180	63748525	.	-	.	ID=comp156965_c0_seq1.mrna1;geneID=comp156965_c0_seq1.path1;Name=comp156965_c0_seq1;Dir=sensecoverage=98.7;identity=99.1;matches=856;mismatches=8;indels=0;unknowns=0;locus=RLOC_00017939
Chr2	stalkie_big_nohaplotig	exon	63747180	63747353	97	-	.	Parent=comp156965_c0_seq1.mrna1;Target=comp156965_c0_seq1 692 865 +
Chr2	stalkie_big_nohaplotig	exon	63747609	63747720	100	-	.	Parent=comp156965_c0_seq1.mrna1;Target=comp156965_c0_seq1 580 691 +
Chr2	stalkie_big_nohaplotig	exon	63747861	63748151	100	-	.	Parent=comp156965_c0_seq1.mrna1;Target=comp156965_c0_seq1 289 579 +
Chr2	stalkie_big_nohaplotig	exon	63748239	63748525	98	-	.	Parent=comp156965_c0_seq1.mrna1;Target=comp156965_c0_seq1 2 288 +
Chr2	stalkie_big_nohaplotig	CDS	63747280	63747353	.	-	2	Parent=comp156965_c0_seq1.mrna1;Target=comp156965_c0_seq1 692 765 +
Chr2	stalkie_big_nohaplotig	CDS	63747609	63747720	.	-	0	Parent=comp156965_c0_seq1.mrna1;Target=comp156965_c0_seq1 580 691 +
Chr2	stalkie_big_nohaplotig	CDS	63747861	63748151	.	-	0	Parent=comp156965_c0_seq1.mrna1;Target=comp156965_c0_seq1 289 579 +
Chr2	stalkie_big_nohaplotig	CDS	63748239	63748436	.	-	0	Parent=comp156965_c0_seq1.mrna1;Target=comp156965_c0_seq1 91 288 +
Chr2	gffcl	locus	63777934	63779019	.	-	.	ID=RLOC_00017940;geneIDs=FBgn0037239.2.path2;transcripts=FBgn0037239.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	63777934	63779019	.	-	.	ID=FBgn0037239.2.mrna2;geneID=FBgn0037239.2.path2;Name=FBgn0037239.2;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1085;mismatches=1;indels=0;unknowns=0;Target=FBgn0037239.2 1086 1 .;locus=RLOC_00017940
Chr2	stalkie_big_nohaplotig	exon	63777934	63779019	99	-	.	Parent=FBgn0037239.2.mrna2
Chr2	stalkie_big_nohaplotig	CDS	63777934	63779019	.	-	0	Parent=FBgn0037239.2.mrna2
Chr2	gffcl	locus	63803015	63803418	.	-	.	ID=RLOC_00017941;geneIDs=comp149553_c0_seq1.path7;transcripts=comp149553_c0_seq1.mrna7
Chr2	stalkie_big_nohaplotig	mRNA	63803015	63803418	.	-	.	ID=comp149553_c0_seq1.mrna7;geneID=comp149553_c0_seq1.path7;Name=comp149553_c0_seq1;Dir=indeterminatecoverage=89.8;identity=99.8;matches=403;mismatches=1;indels=0;unknowns=0;Target=comp149553_c0_seq1 404 1 .;CDS_Target=comp149553_c0_seq1 384 298 .;locus=RLOC_00017941
Chr2	stalkie_big_nohaplotig	exon	63803015	63803418	99	-	.	Parent=comp149553_c0_seq1.mrna7
Chr2	stalkie_big_nohaplotig	CDS	63803035	63803121	.	-	0	Parent=comp149553_c0_seq1.mrna7
Chr2	gffcl	locus	63803561	63805007	.	+	.	ID=RLOC_00017942;geneIDs=FBgn0039711.3.path5;transcripts=FBgn0039711.3.mrna5
Chr2	stalkie_big_nohaplotig	mRNA	63803561	63805007	.	+	.	ID=FBgn0039711.3.mrna5;geneID=FBgn0039711.3.path5;Name=FBgn0039711.3;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1445;mismatches=1;indels=1;unknowns=0;Target=FBgn0039711.3 1446 1 .;CDS_Target=FBgn0039711.3 1446 391 .;locus=RLOC_00017942
Chr2	stalkie_big_nohaplotig	exon	63803561	63805007	99	+	.	Parent=FBgn0039711.3.mrna5
Chr2	stalkie_big_nohaplotig	CDS	63803952	63805007	.	+	0	Parent=FBgn0039711.3.mrna5
Chr2	gffcl	locus	63852222	63853904	.	+	.	ID=RLOC_00017943;geneIDs=FBgn0036040.1.path1,FBgn0036040.2.path1;transcripts=FBgn0036040.1.mrna1,FBgn0036040.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63852222	63853904	.	+	.	ID=FBgn0036040.1.mrna1;geneID=FBgn0036040.1.path1;Name=FBgn0036040.1;Dir=sensecoverage=100.0;identity=89.2;matches=1431;mismatches=96;indels=78;unknowns=0;locus=RLOC_00017943
Chr2	stalkie_big_nohaplotig	exon	63852222	63852382	61	+	.	Parent=FBgn0036040.1.mrna1;Target=FBgn0036040.1 1 239 +
Chr2	stalkie_big_nohaplotig	exon	63852471	63852479	100	+	.	Parent=FBgn0036040.1.mrna1;Target=FBgn0036040.1 265 273 +
Chr2	stalkie_big_nohaplotig	exon	63852485	63852833	88	+	.	Parent=FBgn0036040.1.mrna1;Target=FBgn0036040.1 288 636 +
Chr2	stalkie_big_nohaplotig	exon	63852897	63853904	95	+	.	Parent=FBgn0036040.1.mrna1;Target=FBgn0036040.1 637 1644 +
Chr2	stalkie_big_nohaplotig	CDS	63852222	63852382	.	+	0	Parent=FBgn0036040.1.mrna1;Target=FBgn0036040.1 1 239 +
Chr2	stalkie_big_nohaplotig	CDS	63852471	63852479	.	+	1	Parent=FBgn0036040.1.mrna1;Target=FBgn0036040.1 265 273 +
Chr2	stalkie_big_nohaplotig	CDS	63852485	63852833	.	+	1	Parent=FBgn0036040.1.mrna1;Target=FBgn0036040.1 288 636 +
Chr2	stalkie_big_nohaplotig	CDS	63852897	63853904	.	+	0	Parent=FBgn0036040.1.mrna1;Target=FBgn0036040.1 637 1644 +
Chr2	stalkie_big_nohaplotig	mRNA	63852222	63853904	.	+	.	ID=FBgn0036040.2.mrna1;geneID=FBgn0036040.2.path1;Name=FBgn0036040.2;Dir=sensecoverage=100.0;identity=97.7;matches=1515;mismatches=36;indels=0;unknowns=0;locus=RLOC_00017943
Chr2	stalkie_big_nohaplotig	exon	63852222	63852384	96	+	.	Parent=FBgn0036040.2.mrna1;Target=FBgn0036040.2 1 163 +
Chr2	stalkie_big_nohaplotig	exon	63852454	63852833	98	+	.	Parent=FBgn0036040.2.mrna1;Target=FBgn0036040.2 164 543 +
Chr2	stalkie_big_nohaplotig	exon	63852897	63853904	97	+	.	Parent=FBgn0036040.2.mrna1;Target=FBgn0036040.2 544 1551 +
Chr2	stalkie_big_nohaplotig	CDS	63852222	63852384	.	+	0	Parent=FBgn0036040.2.mrna1;Target=FBgn0036040.2 1 163 +
Chr2	stalkie_big_nohaplotig	CDS	63852454	63852833	.	+	2	Parent=FBgn0036040.2.mrna1;Target=FBgn0036040.2 164 543 +
Chr2	stalkie_big_nohaplotig	CDS	63852897	63853904	.	+	0	Parent=FBgn0036040.2.mrna1;Target=FBgn0036040.2 544 1551 +
Chr2	gffcl	locus	63905073	63918426	.	+	.	ID=RLOC_00017945;geneIDs=FBgn0040765.path1;transcripts=FBgn0040765.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	63905073	63918426	.	+	.	ID=FBgn0040765.mrna1;geneID=FBgn0040765.path1;Name=FBgn0040765;Dir=sensecoverage=100.0;identity=100.0;matches=384;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017945
Chr2	stalkie_big_nohaplotig	exon	63905073	63905145	100	+	.	Parent=FBgn0040765.mrna1;Target=FBgn0040765 1 73 +
Chr2	stalkie_big_nohaplotig	exon	63906791	63906928	100	+	.	Parent=FBgn0040765.mrna1;Target=FBgn0040765 74 211 +
Chr2	stalkie_big_nohaplotig	exon	63918254	63918426	100	+	.	Parent=FBgn0040765.mrna1;Target=FBgn0040765 212 384 +
Chr2	stalkie_big_nohaplotig	CDS	63905073	63905145	.	+	0	Parent=FBgn0040765.mrna1;Target=FBgn0040765 1 73 +
Chr2	stalkie_big_nohaplotig	CDS	63906791	63906928	.	+	2	Parent=FBgn0040765.mrna1;Target=FBgn0040765 74 211 +
Chr2	stalkie_big_nohaplotig	CDS	63918254	63918426	.	+	2	Parent=FBgn0040765.mrna1;Target=FBgn0040765 212 384 +
Chr2	gffcl	locus	64122309	64123184	.	-	.	ID=RLOC_00017948;geneIDs=comp96986_c0_seq1.path1;transcripts=comp96986_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64122309	64123184	.	-	.	ID=comp96986_c0_seq1.mrna1;geneID=comp96986_c0_seq1.path1;Name=comp96986_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.3;matches=870;mismatches=6;indels=0;unknowns=0;Target=comp96986_c0_seq1 876 1 .;CDS_Target=comp96986_c0_seq1 299 174 .;locus=RLOC_00017948
Chr2	stalkie_big_nohaplotig	exon	64122309	64123184	99	-	.	Parent=comp96986_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64122886	64123011	.	-	0	Parent=comp96986_c0_seq1.mrna1
Chr2	gffcl	locus	64149032	64155904	.	-	.	ID=RLOC_00017949;geneIDs=FBgn0034638.1.path1;transcripts=FBgn0034638.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64149032	64155904	.	-	.	ID=FBgn0034638.1.mrna1;geneID=FBgn0034638.1.path1;Name=FBgn0034638.1;Dir=sensecoverage=100.0;identity=100.0;matches=411;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017949
Chr2	stalkie_big_nohaplotig	exon	64149032	64149150	100	-	.	Parent=FBgn0034638.1.mrna1;Target=FBgn0034638.1 293 411 +
Chr2	stalkie_big_nohaplotig	exon	64149380	64149529	100	-	.	Parent=FBgn0034638.1.mrna1;Target=FBgn0034638.1 143 292 +
Chr2	stalkie_big_nohaplotig	exon	64155763	64155904	100	-	.	Parent=FBgn0034638.1.mrna1;Target=FBgn0034638.1 1 142 +
Chr2	stalkie_big_nohaplotig	CDS	64149032	64149150	.	-	2	Parent=FBgn0034638.1.mrna1;Target=FBgn0034638.1 293 411 +
Chr2	stalkie_big_nohaplotig	CDS	64149380	64149529	.	-	2	Parent=FBgn0034638.1.mrna1;Target=FBgn0034638.1 143 292 +
Chr2	stalkie_big_nohaplotig	CDS	64155763	64155904	.	-	0	Parent=FBgn0034638.1.mrna1;Target=FBgn0034638.1 1 142 +
Chr2	gffcl	locus	64162147	64163936	.	+	.	ID=RLOC_00017950;geneIDs=comp162210_c0_seq1.path1;transcripts=comp162210_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64162147	64163936	.	+	.	ID=comp162210_c0_seq1.mrna1;geneID=comp162210_c0_seq1.path1;Name=comp162210_c0_seq1;Dir=sensecoverage=95.5;identity=100.0;matches=1672;mismatches=0;indels=0;unknowns=0;Target=comp162210_c0_seq1 1607 1672 +;locus=RLOC_00017950
Chr2	stalkie_big_nohaplotig	exon	64162147	64162822	100	+	.	Parent=comp162210_c0_seq1.mrna1;Target=comp162210_c0_seq1 1 676 +
Chr2	stalkie_big_nohaplotig	exon	64162879	64163326	100	+	.	Parent=comp162210_c0_seq1.mrna1;Target=comp162210_c0_seq1 677 1124 +
Chr2	stalkie_big_nohaplotig	exon	64163389	64163936	100	+	.	Parent=comp162210_c0_seq1.mrna1;Target=comp162210_c0_seq1 1125 1672 +
Chr2	stalkie_big_nohaplotig	CDS	64163871	64163936	.	+	0	Parent=comp162210_c0_seq1.mrna1
Chr2	gffcl	locus	64169861	64182708	.	-	.	ID=RLOC_00017951;geneIDs=comp155123_c0_seq1.path1;transcripts=comp155123_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64169861	64182708	.	-	.	ID=comp155123_c0_seq1.mrna1;geneID=comp155123_c0_seq1.path1;Name=comp155123_c0_seq1;Dir=antisensecoverage=99.7;identity=99.3;matches=1771;mismatches=11;indels=1;unknowns=0;locus=RLOC_00017951
Chr2	stalkie_big_nohaplotig	exon	64169861	64170697	99	-	.	Parent=comp155123_c0_seq1.mrna1;Target=comp155123_c0_seq1 6 841 -
Chr2	stalkie_big_nohaplotig	exon	64174064	64174252	99	-	.	Parent=comp155123_c0_seq1.mrna1;Target=comp155123_c0_seq1 842 1030 -
Chr2	stalkie_big_nohaplotig	exon	64181952	64182708	98	-	.	Parent=comp155123_c0_seq1.mrna1;Target=comp155123_c0_seq1 1031 1787 -
Chr2	stalkie_big_nohaplotig	CDS	64170255	64170697	.	-	2	Parent=comp155123_c0_seq1.mrna1;Target=comp155123_c0_seq1 399 841 .
Chr2	stalkie_big_nohaplotig	CDS	64174064	64174252	.	-	2	Parent=comp155123_c0_seq1.mrna1;Target=comp155123_c0_seq1 842 1030 .
Chr2	stalkie_big_nohaplotig	CDS	64181952	64182003	.	-	0	Parent=comp155123_c0_seq1.mrna1;Target=comp155123_c0_seq1 1031 1082 .
Chr2	gffcl	locus	64194623	64197312	.	-	.	ID=RLOC_00017952;geneIDs=FBgn0042180.1.path1;transcripts=FBgn0042180.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64194623	64197312	.	-	.	ID=FBgn0042180.1.mrna1;geneID=FBgn0042180.1.path1;Name=FBgn0042180.1;Dir=sensecoverage=100.0;identity=100.0;matches=996;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017952
Chr2	stalkie_big_nohaplotig	exon	64194623	64194766	100	-	.	Parent=FBgn0042180.1.mrna1;Target=FBgn0042180.1 853 996 +
Chr2	stalkie_big_nohaplotig	exon	64196403	64197175	100	-	.	Parent=FBgn0042180.1.mrna1;Target=FBgn0042180.1 80 852 +
Chr2	stalkie_big_nohaplotig	exon	64197234	64197312	100	-	.	Parent=FBgn0042180.1.mrna1;Target=FBgn0042180.1 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	64194623	64194766	.	-	0	Parent=FBgn0042180.1.mrna1;Target=FBgn0042180.1 853 996 +
Chr2	stalkie_big_nohaplotig	CDS	64196403	64197175	.	-	2	Parent=FBgn0042180.1.mrna1;Target=FBgn0042180.1 80 852 +
Chr2	stalkie_big_nohaplotig	CDS	64197234	64197312	.	-	0	Parent=FBgn0042180.1.mrna1;Target=FBgn0042180.1 1 79 +
Chr2	gffcl	locus	64199144	64200094	.	+	.	ID=RLOC_00017953;geneIDs=comp144805_c0_seq1.path1;transcripts=comp144805_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64199144	64200094	.	+	.	ID=comp144805_c0_seq1.mrna1;geneID=comp144805_c0_seq1.path1;Name=comp144805_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=951;mismatches=0;indels=0;unknowns=0;Target=comp144805_c0_seq1 951 1 .;CDS_Target=comp144805_c0_seq1 490 278 .;locus=RLOC_00017953
Chr2	stalkie_big_nohaplotig	exon	64199144	64200094	100	+	.	Parent=comp144805_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64199421	64199633	.	+	0	Parent=comp144805_c0_seq1.mrna1
Chr2	gffcl	locus	64202161	64203756	.	-	.	ID=RLOC_00017954;geneIDs=FBgn0033903.1.path1;transcripts=FBgn0033903.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64202161	64203756	.	-	.	ID=FBgn0033903.1.mrna1;geneID=FBgn0033903.1.path1;Name=FBgn0033903.1;Dir=sensecoverage=100.0;identity=100.0;matches=948;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017954
Chr2	stalkie_big_nohaplotig	exon	64202161	64202706	100	-	.	Parent=FBgn0033903.1.mrna1;Target=FBgn0033903.1 403 948 +
Chr2	stalkie_big_nohaplotig	exon	64203182	64203317	100	-	.	Parent=FBgn0033903.1.mrna1;Target=FBgn0033903.1 267 402 +
Chr2	stalkie_big_nohaplotig	exon	64203393	64203568	100	-	.	Parent=FBgn0033903.1.mrna1;Target=FBgn0033903.1 91 266 +
Chr2	stalkie_big_nohaplotig	exon	64203667	64203756	100	-	.	Parent=FBgn0033903.1.mrna1;Target=FBgn0033903.1 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	64202161	64202706	.	-	0	Parent=FBgn0033903.1.mrna1;Target=FBgn0033903.1 403 948 +
Chr2	stalkie_big_nohaplotig	CDS	64203182	64203317	.	-	1	Parent=FBgn0033903.1.mrna1;Target=FBgn0033903.1 267 402 +
Chr2	stalkie_big_nohaplotig	CDS	64203393	64203568	.	-	0	Parent=FBgn0033903.1.mrna1;Target=FBgn0033903.1 91 266 +
Chr2	stalkie_big_nohaplotig	CDS	64203667	64203756	.	-	0	Parent=FBgn0033903.1.mrna1;Target=FBgn0033903.1 1 90 +
Chr2	gffcl	locus	64211392	65847780	.	.	.	ID=RLOC_00017955;geneIDs=FBgn0034885.1.path1,comp146981_c0_seq1.path1,comp156841_c0_seq1.path1,comp160102_c0_seq1.path1;transcripts=comp156841_c0_seq1.mrna1,FBgn0034885.1.mrna1,comp160102_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64211392	65847780	.	-	.	ID=comp156841_c0_seq1.mrna1;geneID=comp156841_c0_seq1.path1;Name=comp156841_c0_seq1;Dir=antisensecoverage=95.5;identity=97.4;matches=1880;mismatches=27;indels=24;unknowns=0;locus=RLOC_00017955
Chr2	stalkie_big_nohaplotig	exon	64211392	64212070	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 7 685 -
Chr2	stalkie_big_nohaplotig	exon	64212149	64212707	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 686 1244 -
Chr2	stalkie_big_nohaplotig	exon	64249977	64250309	99	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 1245 1578 -
Chr2	stalkie_big_nohaplotig	exon	65533084	65533090	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 1579 1585 -
Chr2	stalkie_big_nohaplotig	exon	65540731	65540734	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 1586 1589 -
Chr2	stalkie_big_nohaplotig	exon	65546174	65546180	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 1590 1596 -
Chr2	stalkie_big_nohaplotig	exon	65547869	65547877	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 1597 1605 -
Chr2	stalkie_big_nohaplotig	exon	65556859	65556861	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 1606 1608 -
Chr2	stalkie_big_nohaplotig	exon	65558278	65558298	52	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 1609 1620 -
Chr2	stalkie_big_nohaplotig	exon	65567212	65567220	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 1622 1630 -
Chr2	stalkie_big_nohaplotig	exon	65593135	65593138	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 1663 1666 -
Chr2	stalkie_big_nohaplotig	exon	65593329	65593336	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 1667 1674 -
Chr2	stalkie_big_nohaplotig	exon	65593349	65593356	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 1721 1728 -
Chr2	stalkie_big_nohaplotig	exon	65594631	65594638	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 1736 1743 -
Chr2	stalkie_big_nohaplotig	exon	65594675	65594686	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 1803 1814 -
Chr2	stalkie_big_nohaplotig	exon	65596154	65596170	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 1828 1844 -
Chr2	stalkie_big_nohaplotig	exon	65602786	65602793	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 1866 1873 -
Chr2	stalkie_big_nohaplotig	exon	65622920	65622924	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 1933 1937 -
Chr2	stalkie_big_nohaplotig	exon	65671289	65671337	48	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 1938 1978 -
Chr2	stalkie_big_nohaplotig	exon	65677887	65677891	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 1984 1988 -
Chr2	stalkie_big_nohaplotig	exon	65683534	65683543	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 1989 1998 -
Chr2	stalkie_big_nohaplotig	exon	65683882	65683885	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 2071 2074 -
Chr2	stalkie_big_nohaplotig	exon	65687726	65687732	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 2075 2081 -
Chr2	stalkie_big_nohaplotig	exon	65717681	65717684	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 2082 2085 -
Chr2	stalkie_big_nohaplotig	exon	65725074	65725076	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 2095 2097 -
Chr2	stalkie_big_nohaplotig	exon	65728629	65728640	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 2098 2109 -
Chr2	stalkie_big_nohaplotig	exon	65732294	65732302	88	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 2110 2118 -
Chr2	stalkie_big_nohaplotig	exon	65737670	65737692	72	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 2119 2143 -
Chr2	stalkie_big_nohaplotig	exon	65744304	65744309	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 2144 2149 -
Chr2	stalkie_big_nohaplotig	exon	65752076	65752085	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 2150 2159 -
Chr2	stalkie_big_nohaplotig	exon	65785210	65785232	73	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 2160 2178 -
Chr2	stalkie_big_nohaplotig	exon	65791747	65791753	85	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 2179 2185 -
Chr2	stalkie_big_nohaplotig	exon	65796465	65796474	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 2186 2195 -
Chr2	stalkie_big_nohaplotig	exon	65810650	65810652	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 2197 2199 -
Chr2	stalkie_big_nohaplotig	exon	65813351	65813352	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 2200 2201 -
Chr2	stalkie_big_nohaplotig	exon	65816686	65816696	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 2202 2212 -
Chr2	stalkie_big_nohaplotig	exon	65839763	65839767	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 2213 2217 -
Chr2	stalkie_big_nohaplotig	exon	65841795	65841799	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 2218 2222 -
Chr2	stalkie_big_nohaplotig	exon	65847767	65847780	100	-	.	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 2223 2236 -
Chr2	stalkie_big_nohaplotig	CDS	64211858	64212070	.	-	0	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 473 685 .
Chr2	stalkie_big_nohaplotig	CDS	64212149	64212688	.	-	0	Parent=comp156841_c0_seq1.mrna1;Target=comp156841_c0_seq1 686 1225 .
Chr2	stalkie_big_nohaplotig	mRNA	64211861	64216458	.	-	.	ID=FBgn0034885.1.mrna1;geneID=FBgn0034885.1.path1;Name=FBgn0034885.1;Dir=sensecoverage=100.0;identity=100.0;matches=825;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017955
Chr2	stalkie_big_nohaplotig	exon	64211861	64212070	100	-	.	Parent=FBgn0034885.1.mrna1;Target=FBgn0034885.1 616 825 +
Chr2	stalkie_big_nohaplotig	exon	64212149	64212707	100	-	.	Parent=FBgn0034885.1.mrna1;Target=FBgn0034885.1 57 615 +
Chr2	stalkie_big_nohaplotig	exon	64216403	64216458	100	-	.	Parent=FBgn0034885.1.mrna1;Target=FBgn0034885.1 1 56 +
Chr2	stalkie_big_nohaplotig	CDS	64211861	64212070	.	-	0	Parent=FBgn0034885.1.mrna1;Target=FBgn0034885.1 616 825 +
Chr2	stalkie_big_nohaplotig	CDS	64212149	64212707	.	-	1	Parent=FBgn0034885.1.mrna1;Target=FBgn0034885.1 57 615 +
Chr2	stalkie_big_nohaplotig	CDS	64216403	64216458	.	-	0	Parent=FBgn0034885.1.mrna1;Target=FBgn0034885.1 1 56 +
Chr2	stalkie_big_nohaplotig	mRNA	65683458	65685683	.	-	.	ID=comp160102_c0_seq1.mrna1;geneID=comp160102_c0_seq1.path1;Name=comp160102_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=2212;mismatches=14;indels=38;unknowns=0;Target=comp160102_c0_seq1 2264 1 .;CDS_Target=comp160102_c0_seq1 1177 974 .;locus=RLOC_00017955
Chr2	stalkie_big_nohaplotig	exon	65683458	65685683	97	-	.	Parent=comp160102_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65684516	65684719	.	-	0	Parent=comp160102_c0_seq1.mrna1
Chr2	gffcl	locus	64220267	64221781	.	+	.	ID=RLOC_00017956;geneIDs=comp159657_c2_seq1.path1;transcripts=comp159657_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64220267	64221781	.	+	.	ID=comp159657_c2_seq1.mrna1;geneID=comp159657_c2_seq1.path1;Name=comp159657_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1514;mismatches=1;indels=1;unknowns=0;Target=comp159657_c2_seq1 1516 1 .;CDS_Target=comp159657_c2_seq1 127 2 .;locus=RLOC_00017956
Chr2	stalkie_big_nohaplotig	exon	64220267	64221781	99	+	.	Parent=comp159657_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64220268	64220393	.	+	0	Parent=comp159657_c2_seq1.mrna1
Chr2	gffcl	locus	64230802	64231140	.	+	.	ID=RLOC_00017957;geneIDs=comp151629_c0_seq1.path1;transcripts=comp151629_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64230802	64231140	.	+	.	ID=comp151629_c0_seq1.mrna1;geneID=comp151629_c0_seq1.path1;Name=comp151629_c0_seq1;Dir=indeterminatecoverage=88.0;identity=93.4;matches=323;mismatches=16;indels=7;unknowns=0;Target=comp151629_c0_seq1 346 1 .;CDS_Target=comp151629_c0_seq1 133 2 .;locus=RLOC_00017957
Chr2	stalkie_big_nohaplotig	exon	64230802	64231140	93	+	.	Parent=comp151629_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64230803	64230934	.	+	0	Parent=comp151629_c0_seq1.mrna1
Chr2	gffcl	locus	64252916	64254374	.	-	.	ID=RLOC_00017958;geneIDs=comp145861_c0_seq1.path1;transcripts=comp145861_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64252916	64254374	.	-	.	ID=comp145861_c0_seq1.mrna1;geneID=comp145861_c0_seq1.path1;Name=comp145861_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=1364;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017958
Chr2	stalkie_big_nohaplotig	exon	64252916	64253562	100	-	.	Parent=comp145861_c0_seq1.mrna1;Target=comp145861_c0_seq1 1 647 -
Chr2	stalkie_big_nohaplotig	exon	64253658	64254374	100	-	.	Parent=comp145861_c0_seq1.mrna1;Target=comp145861_c0_seq1 649 1365 -
Chr2	stalkie_big_nohaplotig	CDS	64253447	64253562	.	-	0	Parent=comp145861_c0_seq1.mrna1;Target=comp145861_c0_seq1 532 647 .
Chr2	stalkie_big_nohaplotig	CDS	64253658	64253717	.	-	0	Parent=comp145861_c0_seq1.mrna1;Target=comp145861_c0_seq1 649 708 .
Chr2	gffcl	locus	64269820	64270381	.	+	.	ID=RLOC_00017959;geneIDs=comp116696_c0_seq1.path1;transcripts=comp116696_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64269820	64270381	.	+	.	ID=comp116696_c0_seq1.mrna1;geneID=comp116696_c0_seq1.path1;Name=comp116696_c0_seq1;Dir=indeterminatecoverage=94.8;identity=99.5;matches=562;mismatches=0;indels=3;unknowns=0;Target=comp116696_c0_seq1 595 31 .;CDS_Target=comp116696_c0_seq1 595 410 .;locus=RLOC_00017959
Chr2	stalkie_big_nohaplotig	exon	64269820	64270381	99	+	.	Parent=comp116696_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64270196	64270381	.	+	0	Parent=comp116696_c0_seq1.mrna1
Chr2	gffcl	locus	64279844	64289168	.	+	.	ID=RLOC_00017960;geneIDs=FBgn0028741.1.path1,FBgn0250851.1.path1;transcripts=FBgn0250851.1.mrna1,FBgn0028741.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64279844	64281688	.	+	.	ID=FBgn0250851.1.mrna1;geneID=FBgn0250851.1.path1;Name=FBgn0250851.1;Dir=sensecoverage=100.0;identity=100.0;matches=282;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017960
Chr2	stalkie_big_nohaplotig	exon	64279844	64279897	100	+	.	Parent=FBgn0250851.1.mrna1;Target=FBgn0250851.1 1 54 +
Chr2	stalkie_big_nohaplotig	exon	64281395	64281541	100	+	.	Parent=FBgn0250851.1.mrna1;Target=FBgn0250851.1 55 201 +
Chr2	stalkie_big_nohaplotig	exon	64281608	64281688	100	+	.	Parent=FBgn0250851.1.mrna1;Target=FBgn0250851.1 202 282 +
Chr2	stalkie_big_nohaplotig	CDS	64279844	64279897	.	+	0	Parent=FBgn0250851.1.mrna1;Target=FBgn0250851.1 1 54 +
Chr2	stalkie_big_nohaplotig	CDS	64281395	64281541	.	+	0	Parent=FBgn0250851.1.mrna1;Target=FBgn0250851.1 55 201 +
Chr2	stalkie_big_nohaplotig	CDS	64281608	64281688	.	+	0	Parent=FBgn0250851.1.mrna1;Target=FBgn0250851.1 202 282 +
Chr2	stalkie_big_nohaplotig	mRNA	64281675	64289168	.	+	.	ID=FBgn0028741.1.mrna1;geneID=FBgn0028741.1.path1;Name=FBgn0028741.1;Dir=sensecoverage=100.0;identity=99.9;matches=5418;mismatches=4;indels=1;unknowns=0;locus=RLOC_00017960
Chr2	stalkie_big_nohaplotig	exon	64281675	64282187	99	+	.	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 1 513 +
Chr2	stalkie_big_nohaplotig	exon	64282251	64282440	100	+	.	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 514 703 +
Chr2	stalkie_big_nohaplotig	exon	64282501	64283005	99	+	.	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 704 1208 +
Chr2	stalkie_big_nohaplotig	exon	64283062	64284003	100	+	.	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 1209 2150 +
Chr2	stalkie_big_nohaplotig	exon	64284068	64284744	100	+	.	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 2151 2827 +
Chr2	stalkie_big_nohaplotig	exon	64284812	64285106	100	+	.	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 2828 3122 +
Chr2	stalkie_big_nohaplotig	exon	64285162	64286409	100	+	.	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 3123 4370 +
Chr2	stalkie_big_nohaplotig	exon	64286495	64287006	100	+	.	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 4371 4882 +
Chr2	stalkie_big_nohaplotig	exon	64287064	64287226	100	+	.	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 4883 5045 +
Chr2	stalkie_big_nohaplotig	exon	64287296	64287453	100	+	.	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 5046 5203 +
Chr2	stalkie_big_nohaplotig	exon	64288889	64289050	100	+	.	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 5204 5365 +
Chr2	stalkie_big_nohaplotig	exon	64289112	64289168	98	+	.	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 5366 5423 +
Chr2	stalkie_big_nohaplotig	CDS	64281675	64282187	.	+	0	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 1 513 +
Chr2	stalkie_big_nohaplotig	CDS	64282251	64282440	.	+	0	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 514 703 +
Chr2	stalkie_big_nohaplotig	CDS	64282501	64283005	.	+	2	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 704 1208 +
Chr2	stalkie_big_nohaplotig	CDS	64283062	64284003	.	+	1	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 1209 2150 +
Chr2	stalkie_big_nohaplotig	CDS	64284068	64284744	.	+	1	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 2151 2827 +
Chr2	stalkie_big_nohaplotig	CDS	64284812	64285106	.	+	2	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 2828 3122 +
Chr2	stalkie_big_nohaplotig	CDS	64285162	64286409	.	+	1	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 3123 4370 +
Chr2	stalkie_big_nohaplotig	CDS	64286495	64287006	.	+	1	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 4371 4882 +
Chr2	stalkie_big_nohaplotig	CDS	64287064	64287226	.	+	2	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 4883 5045 +
Chr2	stalkie_big_nohaplotig	CDS	64287296	64287453	.	+	1	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 5046 5203 +
Chr2	stalkie_big_nohaplotig	CDS	64288889	64289050	.	+	2	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 5204 5365 +
Chr2	stalkie_big_nohaplotig	CDS	64289112	64289166	.	+	2	Parent=FBgn0028741.1.mrna1;Target=FBgn0028741.1 5366 5421 +
Chr2	gffcl	locus	64295869	64297119	.	+	.	ID=RLOC_00017961;geneIDs=FBgn0028740.1.path1;transcripts=FBgn0028740.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64295869	64297119	.	+	.	ID=FBgn0028740.1.mrna1;geneID=FBgn0028740.1.path1;Name=FBgn0028740.1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1240;mismatches=11;indels=0;unknowns=0;Target=FBgn0028740.1 1251 1 .;locus=RLOC_00017961
Chr2	stalkie_big_nohaplotig	exon	64295869	64297119	99	+	.	Parent=FBgn0028740.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64295869	64297119	.	+	0	Parent=FBgn0028740.1.mrna1
Chr2	gffcl	locus	64308702	64326472	.	+	.	ID=RLOC_00017962;geneIDs=FBgn0033483.1.path1;transcripts=FBgn0033483.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64308702	64326472	.	+	.	ID=FBgn0033483.1.mrna1;geneID=FBgn0033483.1.path1;Name=FBgn0033483.1;Dir=sensecoverage=100.0;identity=100.0;matches=1290;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017962
Chr2	stalkie_big_nohaplotig	exon	64308702	64308869	100	+	.	Parent=FBgn0033483.1.mrna1;Target=FBgn0033483.1 1 168 +
Chr2	stalkie_big_nohaplotig	exon	64315166	64315291	100	+	.	Parent=FBgn0033483.1.mrna1;Target=FBgn0033483.1 169 294 +
Chr2	stalkie_big_nohaplotig	exon	64324306	64324571	100	+	.	Parent=FBgn0033483.1.mrna1;Target=FBgn0033483.1 295 560 +
Chr2	stalkie_big_nohaplotig	exon	64324631	64324768	100	+	.	Parent=FBgn0033483.1.mrna1;Target=FBgn0033483.1 561 698 +
Chr2	stalkie_big_nohaplotig	exon	64324857	64324990	100	+	.	Parent=FBgn0033483.1.mrna1;Target=FBgn0033483.1 699 832 +
Chr2	stalkie_big_nohaplotig	exon	64325954	64326055	100	+	.	Parent=FBgn0033483.1.mrna1;Target=FBgn0033483.1 833 934 +
Chr2	stalkie_big_nohaplotig	exon	64326117	64326472	100	+	.	Parent=FBgn0033483.1.mrna1;Target=FBgn0033483.1 935 1290 +
Chr2	stalkie_big_nohaplotig	CDS	64308702	64308869	.	+	0	Parent=FBgn0033483.1.mrna1;Target=FBgn0033483.1 1 168 +
Chr2	stalkie_big_nohaplotig	CDS	64315166	64315291	.	+	0	Parent=FBgn0033483.1.mrna1;Target=FBgn0033483.1 169 294 +
Chr2	stalkie_big_nohaplotig	CDS	64324306	64324571	.	+	0	Parent=FBgn0033483.1.mrna1;Target=FBgn0033483.1 295 560 +
Chr2	stalkie_big_nohaplotig	CDS	64324631	64324768	.	+	1	Parent=FBgn0033483.1.mrna1;Target=FBgn0033483.1 561 698 +
Chr2	stalkie_big_nohaplotig	CDS	64324857	64324990	.	+	1	Parent=FBgn0033483.1.mrna1;Target=FBgn0033483.1 699 832 +
Chr2	stalkie_big_nohaplotig	CDS	64325954	64326055	.	+	2	Parent=FBgn0033483.1.mrna1;Target=FBgn0033483.1 833 934 +
Chr2	stalkie_big_nohaplotig	CDS	64326117	64326472	.	+	2	Parent=FBgn0033483.1.mrna1;Target=FBgn0033483.1 935 1290 +
Chr2	gffcl	locus	64335694	64336294	.	-	.	ID=RLOC_00017963;geneIDs=comp136291_c0_seq1.path1;transcripts=comp136291_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64335694	64336294	.	-	.	ID=comp136291_c0_seq1.mrna1;geneID=comp136291_c0_seq1.path1;Name=comp136291_c0_seq1;Dir=indeterminatecoverage=96.9;identity=99.5;matches=598;mismatches=3;indels=0;unknowns=0;Target=comp136291_c0_seq1 620 20 .;CDS_Target=comp136291_c0_seq1 179 21 .;locus=RLOC_00017963
Chr2	stalkie_big_nohaplotig	exon	64335694	64336294	99	-	.	Parent=comp136291_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64336135	64336293	.	-	0	Parent=comp136291_c0_seq1.mrna1
Chr2	gffcl	locus	64336349	64337043	.	+	.	ID=RLOC_00017964;geneIDs=comp144623_c0_seq1.path1;transcripts=comp144623_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64336349	64337043	.	+	.	ID=comp144623_c0_seq1.mrna1;geneID=comp144623_c0_seq1.path1;Name=comp144623_c0_seq1;Dir=antisensecoverage=98.8;identity=96.3;matches=578;mismatches=16;indels=6;unknowns=0;locus=RLOC_00017964
Chr2	stalkie_big_nohaplotig	exon	64336349	64336739	97	+	.	Parent=comp144623_c0_seq1.mrna1;Target=comp144623_c0_seq1 206 594 -
Chr2	stalkie_big_nohaplotig	exon	64336835	64337043	93	+	.	Parent=comp144623_c0_seq1.mrna1;Target=comp144623_c0_seq1 1 205 -
Chr2	stalkie_big_nohaplotig	CDS	64336588	64336739	.	+	0	Parent=comp144623_c0_seq1.mrna1;Target=comp144623_c0_seq1 206 356 .
Chr2	stalkie_big_nohaplotig	CDS	64336835	64336857	.	+	1	Parent=comp144623_c0_seq1.mrna1;Target=comp144623_c0_seq1 183 205 .
Chr2	gffcl	locus	64337499	64337962	.	-	.	ID=RLOC_00017965;geneIDs=comp145386_c0_seq1.path1;transcripts=comp145386_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64337499	64337962	.	-	.	ID=comp145386_c0_seq1.mrna1;geneID=comp145386_c0_seq1.path1;Name=comp145386_c0_seq1;Dir=indeterminatecoverage=97.0;identity=96.3;matches=447;mismatches=13;indels=4;unknowns=0;Target=comp145386_c0_seq1 460 1 .;CDS_Target=comp145386_c0_seq1 409 404 .;locus=RLOC_00017965
Chr2	stalkie_big_nohaplotig	exon	64337499	64337962	96	-	.	Parent=comp145386_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64337550	64337559	.	-	0	Parent=comp145386_c0_seq1.mrna1
Chr2	gffcl	locus	64338737	64344559	.	+	.	ID=RLOC_00017966;geneIDs=comp161067_c1_seq1.path1;transcripts=comp161067_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64338737	64344559	.	+	.	ID=comp161067_c1_seq1.mrna1;geneID=comp161067_c1_seq1.path1;Name=comp161067_c1_seq1;Dir=antisensecoverage=100.0;identity=99.2;matches=1538;mismatches=12;indels=1;unknowns=0;locus=RLOC_00017966
Chr2	stalkie_big_nohaplotig	exon	64338737	64339327	98	+	.	Parent=comp161067_c1_seq1.mrna1;Target=comp161067_c1_seq1 961 1551 -
Chr2	stalkie_big_nohaplotig	exon	64342737	64342961	100	+	.	Parent=comp161067_c1_seq1.mrna1;Target=comp161067_c1_seq1 736 960 -
Chr2	stalkie_big_nohaplotig	exon	64343826	64344559	99	+	.	Parent=comp161067_c1_seq1.mrna1;Target=comp161067_c1_seq1 1 735 -
Chr2	stalkie_big_nohaplotig	CDS	64339120	64339327	.	+	0	Parent=comp161067_c1_seq1.mrna1;Target=comp161067_c1_seq1 961 1168 .
Chr2	stalkie_big_nohaplotig	CDS	64342737	64342961	.	+	2	Parent=comp161067_c1_seq1.mrna1;Target=comp161067_c1_seq1 736 960 .
Chr2	stalkie_big_nohaplotig	CDS	64343826	64344144	.	+	2	Parent=comp161067_c1_seq1.mrna1;Target=comp161067_c1_seq1 416 735 .
Chr2	gffcl	locus	64346907	64347170	.	+	.	ID=RLOC_00017967;geneIDs=comp142936_c0_seq1.path1;transcripts=comp142936_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64346907	64347170	.	+	.	ID=comp142936_c0_seq1.mrna1;geneID=comp142936_c0_seq1.path1;Name=comp142936_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=261;mismatches=3;indels=0;unknowns=0;Target=comp142936_c0_seq1 264 1 .;CDS_Target=comp142936_c0_seq1 262 179 .;locus=RLOC_00017967
Chr2	stalkie_big_nohaplotig	exon	64346907	64347170	98	+	.	Parent=comp142936_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64347085	64347168	.	+	0	Parent=comp142936_c0_seq1.mrna1
Chr2	gffcl	locus	64354005	64354835	.	+	.	ID=RLOC_00017968;geneIDs=FBgn0033468.1.path1;transcripts=FBgn0033468.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64354005	64354835	.	+	.	ID=FBgn0033468.1.mrna1;geneID=FBgn0033468.1.path1;Name=FBgn0033468.1;Dir=sensecoverage=100.0;identity=99.7;matches=640;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017968
Chr2	stalkie_big_nohaplotig	exon	64354005	64354150	100	+	.	Parent=FBgn0033468.1.mrna1;Target=FBgn0033468.1 1 146 +
Chr2	stalkie_big_nohaplotig	exon	64354209	64354415	99	+	.	Parent=FBgn0033468.1.mrna1;Target=FBgn0033468.1 147 353 +
Chr2	stalkie_big_nohaplotig	exon	64354484	64354677	99	+	.	Parent=FBgn0033468.1.mrna1;Target=FBgn0033468.1 354 547 +
Chr2	stalkie_big_nohaplotig	exon	64354741	64354835	100	+	.	Parent=FBgn0033468.1.mrna1;Target=FBgn0033468.1 548 642 +
Chr2	stalkie_big_nohaplotig	CDS	64354005	64354150	.	+	0	Parent=FBgn0033468.1.mrna1;Target=FBgn0033468.1 1 146 +
Chr2	stalkie_big_nohaplotig	CDS	64354209	64354415	.	+	1	Parent=FBgn0033468.1.mrna1;Target=FBgn0033468.1 147 353 +
Chr2	stalkie_big_nohaplotig	CDS	64354484	64354677	.	+	1	Parent=FBgn0033468.1.mrna1;Target=FBgn0033468.1 354 547 +
Chr2	stalkie_big_nohaplotig	CDS	64354741	64354835	.	+	2	Parent=FBgn0033468.1.mrna1;Target=FBgn0033468.1 548 642 +
Chr2	gffcl	locus	64355367	64357775	.	-	.	ID=RLOC_00017969;geneIDs=FBgn0034277.1.path1;transcripts=FBgn0034277.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64355367	64357775	.	-	.	ID=FBgn0034277.1.mrna1;geneID=FBgn0034277.1.path1;Name=FBgn0034277.1;Dir=sensecoverage=100.0;identity=100.0;matches=2030;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017969
Chr2	stalkie_big_nohaplotig	exon	64355367	64355746	100	-	.	Parent=FBgn0034277.1.mrna1;Target=FBgn0034277.1 1652 2031 +
Chr2	stalkie_big_nohaplotig	exon	64355802	64356051	99	-	.	Parent=FBgn0034277.1.mrna1;Target=FBgn0034277.1 1402 1651 +
Chr2	stalkie_big_nohaplotig	exon	64356111	64357145	100	-	.	Parent=FBgn0034277.1.mrna1;Target=FBgn0034277.1 367 1401 +
Chr2	stalkie_big_nohaplotig	exon	64357204	64357442	100	-	.	Parent=FBgn0034277.1.mrna1;Target=FBgn0034277.1 128 366 +
Chr2	stalkie_big_nohaplotig	exon	64357649	64357775	100	-	.	Parent=FBgn0034277.1.mrna1;Target=FBgn0034277.1 1 127 +
Chr2	stalkie_big_nohaplotig	CDS	64355367	64355746	.	-	2	Parent=FBgn0034277.1.mrna1;Target=FBgn0034277.1 1652 2031 +
Chr2	stalkie_big_nohaplotig	CDS	64355802	64356051	.	-	0	Parent=FBgn0034277.1.mrna1;Target=FBgn0034277.1 1402 1651 +
Chr2	stalkie_big_nohaplotig	CDS	64356111	64357145	.	-	0	Parent=FBgn0034277.1.mrna1;Target=FBgn0034277.1 367 1401 +
Chr2	stalkie_big_nohaplotig	CDS	64357204	64357442	.	-	2	Parent=FBgn0034277.1.mrna1;Target=FBgn0034277.1 128 366 +
Chr2	stalkie_big_nohaplotig	CDS	64357649	64357775	.	-	0	Parent=FBgn0034277.1.mrna1;Target=FBgn0034277.1 1 127 +
Chr2	gffcl	locus	64360494	64362180	.	-	.	ID=RLOC_00017970;geneIDs=FBgn0034279.1.path1;transcripts=FBgn0034279.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64360494	64362180	.	-	.	ID=FBgn0034279.1.mrna1;geneID=FBgn0034279.1.path1;Name=FBgn0034279.1;Dir=sensecoverage=100.0;identity=99.7;matches=1431;mismatches=2;indels=2;unknowns=0;locus=RLOC_00017970
Chr2	stalkie_big_nohaplotig	exon	64360494	64361367	99	-	.	Parent=FBgn0034279.1.mrna1;Target=FBgn0034279.1 560 1434 +
Chr2	stalkie_big_nohaplotig	exon	64361546	64361761	99	-	.	Parent=FBgn0034279.1.mrna1;Target=FBgn0034279.1 345 559 +
Chr2	stalkie_big_nohaplotig	exon	64361837	64362180	99	-	.	Parent=FBgn0034279.1.mrna1;Target=FBgn0034279.1 1 344 +
Chr2	stalkie_big_nohaplotig	CDS	64360494	64361367	.	-	2	Parent=FBgn0034279.1.mrna1;Target=FBgn0034279.1 560 1434 +
Chr2	stalkie_big_nohaplotig	CDS	64361546	64361747	.	-	0	Parent=FBgn0034279.1.mrna1;Target=FBgn0034279.1 358 559 +
Chr2	gffcl	locus	64365228	64367218	.	-	.	ID=RLOC_00017971;geneIDs=FBgn0003071.2.path1;transcripts=FBgn0003071.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64365228	64367218	.	-	.	ID=FBgn0003071.2.mrna1;geneID=FBgn0003071.2.path1;Name=FBgn0003071.2;Dir=sensecoverage=71.2;identity=99.7;matches=1328;mismatches=4;indels=0;unknowns=0;locus=RLOC_00017971
Chr2	stalkie_big_nohaplotig	exon	64365228	64365678	100	-	.	Parent=FBgn0003071.2.mrna1;Target=FBgn0003071.2 1422 1872 +
Chr2	stalkie_big_nohaplotig	exon	64365882	64366045	98	-	.	Parent=FBgn0003071.2.mrna1;Target=FBgn0003071.2 1258 1421 +
Chr2	stalkie_big_nohaplotig	exon	64366105	64366368	100	-	.	Parent=FBgn0003071.2.mrna1;Target=FBgn0003071.2 994 1257 +
Chr2	stalkie_big_nohaplotig	exon	64366600	64366788	100	-	.	Parent=FBgn0003071.2.mrna1;Target=FBgn0003071.2 805 993 +
Chr2	stalkie_big_nohaplotig	exon	64366900	64367008	99	-	.	Parent=FBgn0003071.2.mrna1;Target=FBgn0003071.2 696 804 +
Chr2	stalkie_big_nohaplotig	exon	64367064	64367218	100	-	.	Parent=FBgn0003071.2.mrna1;Target=FBgn0003071.2 541 695 +
Chr2	stalkie_big_nohaplotig	CDS	64365228	64365678	.	-	1	Parent=FBgn0003071.2.mrna1;Target=FBgn0003071.2 1422 1872 +
Chr2	stalkie_big_nohaplotig	CDS	64365882	64366045	.	-	0	Parent=FBgn0003071.2.mrna1;Target=FBgn0003071.2 1258 1421 +
Chr2	stalkie_big_nohaplotig	CDS	64366105	64366368	.	-	0	Parent=FBgn0003071.2.mrna1;Target=FBgn0003071.2 994 1257 +
Chr2	stalkie_big_nohaplotig	CDS	64366600	64366788	.	-	0	Parent=FBgn0003071.2.mrna1;Target=FBgn0003071.2 805 993 +
Chr2	stalkie_big_nohaplotig	CDS	64366900	64367008	.	-	1	Parent=FBgn0003071.2.mrna1;Target=FBgn0003071.2 696 804 +
Chr2	stalkie_big_nohaplotig	CDS	64367064	64367218	.	-	0	Parent=FBgn0003071.2.mrna1;Target=FBgn0003071.2 541 695 +
Chr2	gffcl	locus	64386890	64391061	.	+	.	ID=RLOC_00017973;geneIDs=FBgn0033482.1.path1;transcripts=FBgn0033482.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64386890	64391061	.	+	.	ID=FBgn0033482.1.mrna1;geneID=FBgn0033482.1.path1;Name=FBgn0033482.1;Dir=sensecoverage=100.0;identity=100.0;matches=3668;mismatches=0;indels=1;unknowns=0;locus=RLOC_00017973
Chr2	stalkie_big_nohaplotig	exon	64386890	64387068	100	+	.	Parent=FBgn0033482.1.mrna1;Target=FBgn0033482.1 1 179 +
Chr2	stalkie_big_nohaplotig	exon	64387202	64387757	100	+	.	Parent=FBgn0033482.1.mrna1;Target=FBgn0033482.1 180 735 +
Chr2	stalkie_big_nohaplotig	exon	64387838	64388089	100	+	.	Parent=FBgn0033482.1.mrna1;Target=FBgn0033482.1 736 987 +
Chr2	stalkie_big_nohaplotig	exon	64388143	64388773	100	+	.	Parent=FBgn0033482.1.mrna1;Target=FBgn0033482.1 988 1618 +
Chr2	stalkie_big_nohaplotig	exon	64388840	64389018	100	+	.	Parent=FBgn0033482.1.mrna1;Target=FBgn0033482.1 1619 1797 +
Chr2	stalkie_big_nohaplotig	exon	64389078	64390042	100	+	.	Parent=FBgn0033482.1.mrna1;Target=FBgn0033482.1 1798 2762 +
Chr2	stalkie_big_nohaplotig	exon	64390156	64391061	99	+	.	Parent=FBgn0033482.1.mrna1;Target=FBgn0033482.1 2763 3669 +
Chr2	stalkie_big_nohaplotig	CDS	64386890	64387068	.	+	0	Parent=FBgn0033482.1.mrna1;Target=FBgn0033482.1 1 179 +
Chr2	stalkie_big_nohaplotig	CDS	64387202	64387757	.	+	1	Parent=FBgn0033482.1.mrna1;Target=FBgn0033482.1 180 735 +
Chr2	stalkie_big_nohaplotig	CDS	64387838	64388089	.	+	0	Parent=FBgn0033482.1.mrna1;Target=FBgn0033482.1 736 987 +
Chr2	stalkie_big_nohaplotig	CDS	64388143	64388773	.	+	0	Parent=FBgn0033482.1.mrna1;Target=FBgn0033482.1 988 1618 +
Chr2	stalkie_big_nohaplotig	CDS	64388840	64389018	.	+	2	Parent=FBgn0033482.1.mrna1;Target=FBgn0033482.1 1619 1797 +
Chr2	stalkie_big_nohaplotig	CDS	64389078	64390042	.	+	0	Parent=FBgn0033482.1.mrna1;Target=FBgn0033482.1 1798 2762 +
Chr2	stalkie_big_nohaplotig	CDS	64390156	64391061	.	+	1	Parent=FBgn0033482.1.mrna1;Target=FBgn0033482.1 2763 3669 +
Chr2	gffcl	locus	64423741	64426373	.	+	.	ID=RLOC_00017975;geneIDs=FBgn0013548.1.path1;transcripts=FBgn0013548.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64423741	64426373	.	+	.	ID=FBgn0013548.1.mrna1;geneID=FBgn0013548.1.path1;Name=FBgn0013548.1;Dir=sensecoverage=100.0;identity=100.0;matches=2208;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017975
Chr2	stalkie_big_nohaplotig	exon	64423741	64423792	100	+	.	Parent=FBgn0013548.1.mrna1;Target=FBgn0013548.1 1 52 +
Chr2	stalkie_big_nohaplotig	exon	64424036	64424353	100	+	.	Parent=FBgn0013548.1.mrna1;Target=FBgn0013548.1 53 370 +
Chr2	stalkie_big_nohaplotig	exon	64424407	64424732	100	+	.	Parent=FBgn0013548.1.mrna1;Target=FBgn0013548.1 371 696 +
Chr2	stalkie_big_nohaplotig	exon	64424806	64425571	100	+	.	Parent=FBgn0013548.1.mrna1;Target=FBgn0013548.1 697 1462 +
Chr2	stalkie_big_nohaplotig	exon	64425628	64426373	100	+	.	Parent=FBgn0013548.1.mrna1;Target=FBgn0013548.1 1463 2208 +
Chr2	stalkie_big_nohaplotig	CDS	64423741	64423792	.	+	0	Parent=FBgn0013548.1.mrna1;Target=FBgn0013548.1 1 52 +
Chr2	stalkie_big_nohaplotig	CDS	64424036	64424353	.	+	2	Parent=FBgn0013548.1.mrna1;Target=FBgn0013548.1 53 370 +
Chr2	stalkie_big_nohaplotig	CDS	64424407	64424732	.	+	2	Parent=FBgn0013548.1.mrna1;Target=FBgn0013548.1 371 696 +
Chr2	stalkie_big_nohaplotig	CDS	64424806	64425571	.	+	0	Parent=FBgn0013548.1.mrna1;Target=FBgn0013548.1 697 1462 +
Chr2	stalkie_big_nohaplotig	CDS	64425628	64426373	.	+	2	Parent=FBgn0013548.1.mrna1;Target=FBgn0013548.1 1463 2208 +
Chr2	gffcl	locus	64426913	64432007	.	-	.	ID=RLOC_00017976;geneIDs=FBgn0011297.1.path1;transcripts=FBgn0011297.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64426913	64432007	.	-	.	ID=FBgn0011297.1.mrna1;geneID=FBgn0011297.1.path1;Name=FBgn0011297.1;Dir=sensecoverage=100.0;identity=99.8;matches=1557;mismatches=2;indels=1;unknowns=0;locus=RLOC_00017976
Chr2	stalkie_big_nohaplotig	exon	64426913	64428176	99	-	.	Parent=FBgn0011297.1.mrna1;Target=FBgn0011297.1 296 1560 +
Chr2	stalkie_big_nohaplotig	exon	64431713	64432007	99	-	.	Parent=FBgn0011297.1.mrna1;Target=FBgn0011297.1 1 295 +
Chr2	stalkie_big_nohaplotig	CDS	64426913	64428176	.	-	2	Parent=FBgn0011297.1.mrna1;Target=FBgn0011297.1 296 1560 +
Chr2	stalkie_big_nohaplotig	CDS	64431713	64432007	.	-	0	Parent=FBgn0011297.1.mrna1;Target=FBgn0011297.1 1 295 +
Chr2	gffcl	locus	64429606	64430988	.	+	.	ID=RLOC_00017977;geneIDs=FBgn0002174.1.path1;transcripts=FBgn0002174.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64429606	64430988	.	+	.	ID=FBgn0002174.1.mrna1;geneID=FBgn0002174.1.path1;Name=FBgn0002174.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1382;mismatches=1;indels=0;unknowns=0;Target=FBgn0002174.1 1383 1 .;locus=RLOC_00017977
Chr2	stalkie_big_nohaplotig	exon	64429606	64430988	99	+	.	Parent=FBgn0002174.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64429606	64430988	.	+	0	Parent=FBgn0002174.1.mrna1
Chr2	gffcl	locus	64434905	65027505	.	-	.	ID=RLOC_00017978;geneIDs=comp147710_c0_seq1.path1;transcripts=comp147710_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64434905	65027505	.	-	.	ID=comp147710_c0_seq1.mrna1;geneID=comp147710_c0_seq1.path1;Name=comp147710_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=372;mismatches=7;indels=1;unknowns=0;locus=RLOC_00017978
Chr2	stalkie_big_nohaplotig	exon	64434905	64434990	94	-	.	Parent=comp147710_c0_seq1.mrna1;Target=comp147710_c0_seq1 379 294 .
Chr2	stalkie_big_nohaplotig	exon	65027212	65027505	98	-	.	Parent=comp147710_c0_seq1.mrna1;Target=comp147710_c0_seq1 293 1 .
Chr2	stalkie_big_nohaplotig	CDS	64434951	64434990	.	-	1	Parent=comp147710_c0_seq1.mrna1;Target=comp147710_c0_seq1 333 294 .
Chr2	stalkie_big_nohaplotig	CDS	65027212	65027249	.	-	0	Parent=comp147710_c0_seq1.mrna1;Target=comp147710_c0_seq1 293 256 .
Chr2	gffcl	locus	64436276	64436926	.	+	.	ID=RLOC_00017979;geneIDs=comp113182_c0_seq1.path1;transcripts=comp113182_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64436276	64436926	.	+	.	ID=comp113182_c0_seq1.mrna1;geneID=comp113182_c0_seq1.path1;Name=comp113182_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=650;mismatches=1;indels=0;unknowns=0;Target=comp113182_c0_seq1 651 1 .;CDS_Target=comp113182_c0_seq1 649 536 .;locus=RLOC_00017979
Chr2	stalkie_big_nohaplotig	exon	64436276	64436926	99	+	.	Parent=comp113182_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64436811	64436924	.	+	0	Parent=comp113182_c0_seq1.mrna1
Chr2	gffcl	locus	64447605	64448058	.	-	.	ID=RLOC_00017980;geneIDs=comp116987_c0_seq1.path1;transcripts=comp116987_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64447605	64448058	.	-	.	ID=comp116987_c0_seq1.mrna1;geneID=comp116987_c0_seq1.path1;Name=comp116987_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=452;mismatches=2;indels=0;unknowns=0;Target=comp116987_c0_seq1 454 1 .;CDS_Target=comp116987_c0_seq1 389 240 .;locus=RLOC_00017980
Chr2	stalkie_big_nohaplotig	exon	64447605	64448058	99	-	.	Parent=comp116987_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64447670	64447819	.	-	0	Parent=comp116987_c0_seq1.mrna1
Chr2	gffcl	locus	64487786	64500328	.	.	.	ID=RLOC_00017981;geneIDs=FBgn0000562.1.path1,comp129636_c0_seq1.path1,comp145492_c0_seq1.path1;transcripts=FBgn0000562.1.mrna1,comp145492_c0_seq1.mrna1,comp129636_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64487786	64500328	.	-	.	ID=FBgn0000562.1.mrna1;geneID=FBgn0000562.1.path1;Name=FBgn0000562.1;Dir=sensecoverage=98.4;identity=99.3;matches=2462;mismatches=2;indels=15;unknowns=67;locus=RLOC_00017981
Chr2	stalkie_big_nohaplotig	exon	64487786	64487815	93	-	.	Parent=FBgn0000562.1.mrna1;Target=FBgn0000562.1 2814 2843 +
Chr2	stalkie_big_nohaplotig	exon	64488440	64488528	100	-	.	Parent=FBgn0000562.1.mrna1;Target=FBgn0000562.1 2725 2813 +
Chr2	stalkie_big_nohaplotig	exon	64488595	64488844	100	-	.	Parent=FBgn0000562.1.mrna1;Target=FBgn0000562.1 2475 2724 +
Chr2	stalkie_big_nohaplotig	exon	64488906	64489004	100	-	.	Parent=FBgn0000562.1.mrna1;Target=FBgn0000562.1 2376 2474 +
Chr2	stalkie_big_nohaplotig	exon	64489068	64489262	100	-	.	Parent=FBgn0000562.1.mrna1;Target=FBgn0000562.1 2181 2375 +
Chr2	stalkie_big_nohaplotig	exon	64489317	64489564	100	-	.	Parent=FBgn0000562.1.mrna1;Target=FBgn0000562.1 1933 2180 +
Chr2	stalkie_big_nohaplotig	exon	64489605	64490782	98	-	.	Parent=FBgn0000562.1.mrna1;Target=FBgn0000562.1 458 1620 +
Chr2	stalkie_big_nohaplotig	exon	64490844	64491089	100	-	.	Parent=FBgn0000562.1.mrna1;Target=FBgn0000562.1 212 457 +
Chr2	stalkie_big_nohaplotig	exon	64500118	64500328	100	-	.	Parent=FBgn0000562.1.mrna1;Target=FBgn0000562.1 1 211 +
Chr2	stalkie_big_nohaplotig	CDS	64487788	64487815	.	-	1	Parent=FBgn0000562.1.mrna1;Target=FBgn0000562.1 2814 2841 +
Chr2	stalkie_big_nohaplotig	CDS	64488440	64488528	.	-	0	Parent=FBgn0000562.1.mrna1;Target=FBgn0000562.1 2725 2813 +
Chr2	stalkie_big_nohaplotig	CDS	64488595	64488844	.	-	1	Parent=FBgn0000562.1.mrna1;Target=FBgn0000562.1 2475 2724 +
Chr2	stalkie_big_nohaplotig	CDS	64488906	64489004	.	-	1	Parent=FBgn0000562.1.mrna1;Target=FBgn0000562.1 2376 2474 +
Chr2	stalkie_big_nohaplotig	CDS	64489068	64489262	.	-	1	Parent=FBgn0000562.1.mrna1;Target=FBgn0000562.1 2181 2375 +
Chr2	stalkie_big_nohaplotig	CDS	64489317	64489564	.	-	0	Parent=FBgn0000562.1.mrna1;Target=FBgn0000562.1 1933 2180 +
Chr2	stalkie_big_nohaplotig	CDS	64489605	64490782	.	-	2	Parent=FBgn0000562.1.mrna1;Target=FBgn0000562.1 458 1620 +
Chr2	stalkie_big_nohaplotig	CDS	64490844	64491089	.	-	2	Parent=FBgn0000562.1.mrna1;Target=FBgn0000562.1 212 457 +
Chr2	stalkie_big_nohaplotig	CDS	64500118	64500328	.	-	0	Parent=FBgn0000562.1.mrna1;Target=FBgn0000562.1 1 211 +
Chr2	stalkie_big_nohaplotig	mRNA	64487793	64488337	.	-	.	ID=comp145492_c0_seq1.mrna1;geneID=comp145492_c0_seq1.path1;Name=comp145492_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.1;matches=540;mismatches=5;indels=35;unknowns=0;Target=comp145492_c0_seq1 580 1 .;CDS_Target=comp145492_c0_seq1 36 1 .;locus=RLOC_00017981
Chr2	stalkie_big_nohaplotig	exon	64487793	64488337	93	-	.	Parent=comp145492_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64488302	64488337	.	-	0	Parent=comp145492_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64491068	64491772	.	+	.	ID=comp129636_c0_seq1.mrna1;geneID=comp129636_c0_seq1.path1;Name=comp129636_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.6;matches=685;mismatches=20;indels=4;unknowns=0;Target=comp129636_c0_seq1 709 1 .;CDS_Target=comp129636_c0_seq1 383 249 .;locus=RLOC_00017981
Chr2	stalkie_big_nohaplotig	exon	64491068	64491772	96	+	.	Parent=comp129636_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64491314	64491448	.	+	0	Parent=comp129636_c0_seq1.mrna1
Chr2	gffcl	locus	64505649	66213638	.	+	.	ID=RLOC_00017982;geneIDs=FBgn0052017.1.path1,comp148957_c0_seq1.path1,comp161167_c0_seq1.path1;transcripts=comp161167_c0_seq1.mrna1,FBgn0052017.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64505649	66211953	.	+	.	ID=comp161167_c0_seq1.mrna1;geneID=comp161167_c0_seq1.path1;Name=comp161167_c0_seq1;Dir=antisensecoverage=94.8;identity=99.8;matches=1997;mismatches=1;indels=2;unknowns=0;locus=RLOC_00017982
Chr2	stalkie_big_nohaplotig	exon	64505649	64505654	100	+	.	Parent=comp161167_c0_seq1.mrna1;Target=comp161167_c0_seq1 2062 2067 -
Chr2	stalkie_big_nohaplotig	exon	64507554	64507565	85	+	.	Parent=comp161167_c0_seq1.mrna1;Target=comp161167_c0_seq1 2048 2061 -
Chr2	stalkie_big_nohaplotig	exon	64507932	64507934	66	+	.	Parent=comp161167_c0_seq1.mrna1;Target=comp161167_c0_seq1 1979 1981 -
Chr2	stalkie_big_nohaplotig	exon	64509903	64509914	100	+	.	Parent=comp161167_c0_seq1.mrna1;Target=comp161167_c0_seq1 1967 1978 -
Chr2	stalkie_big_nohaplotig	exon	64512097	64512104	100	+	.	Parent=comp161167_c0_seq1.mrna1;Target=comp161167_c0_seq1 1959 1966 -
Chr2	stalkie_big_nohaplotig	exon	66195073	66195389	100	+	.	Parent=comp161167_c0_seq1.mrna1;Target=comp161167_c0_seq1 1642 1958 -
Chr2	stalkie_big_nohaplotig	exon	66198946	66199062	100	+	.	Parent=comp161167_c0_seq1.mrna1;Target=comp161167_c0_seq1 1525 1641 -
Chr2	stalkie_big_nohaplotig	exon	66205797	66206189	100	+	.	Parent=comp161167_c0_seq1.mrna1;Target=comp161167_c0_seq1 1132 1524 -
Chr2	stalkie_big_nohaplotig	exon	66208684	66209068	100	+	.	Parent=comp161167_c0_seq1.mrna1;Target=comp161167_c0_seq1 747 1131 -
Chr2	stalkie_big_nohaplotig	exon	66211210	66211953	100	+	.	Parent=comp161167_c0_seq1.mrna1;Target=comp161167_c0_seq1 3 746 -
Chr2	stalkie_big_nohaplotig	CDS	66195382	66195389	.	+	0	Parent=comp161167_c0_seq1.mrna1;Target=comp161167_c0_seq1 1642 1649 .
Chr2	stalkie_big_nohaplotig	CDS	66198946	66199062	.	+	1	Parent=comp161167_c0_seq1.mrna1;Target=comp161167_c0_seq1 1525 1641 .
Chr2	stalkie_big_nohaplotig	CDS	66205797	66206189	.	+	1	Parent=comp161167_c0_seq1.mrna1;Target=comp161167_c0_seq1 1132 1524 .
Chr2	stalkie_big_nohaplotig	CDS	66208684	66209068	.	+	1	Parent=comp161167_c0_seq1.mrna1;Target=comp161167_c0_seq1 747 1131 .
Chr2	stalkie_big_nohaplotig	CDS	66211210	66211452	.	+	0	Parent=comp161167_c0_seq1.mrna1;Target=comp161167_c0_seq1 504 746 .
Chr2	stalkie_big_nohaplotig	mRNA	66195040	66211449	.	+	.	ID=FBgn0052017.1.mrna1;geneID=FBgn0052017.1.path1;Name=FBgn0052017.1;Dir=sensecoverage=98.7;identity=99.9;matches=1484;mismatches=0;indels=1;unknowns=0;Target=FBgn0052017.1 20 58 +;locus=RLOC_00017982
Chr2	stalkie_big_nohaplotig	exon	66195040	66195389	99	+	.	Parent=FBgn0052017.1.mrna1;Target=FBgn0052017.1 20 368 +
Chr2	stalkie_big_nohaplotig	exon	66198946	66199062	100	+	.	Parent=FBgn0052017.1.mrna1;Target=FBgn0052017.1 369 485 +
Chr2	stalkie_big_nohaplotig	exon	66205797	66206189	100	+	.	Parent=FBgn0052017.1.mrna1;Target=FBgn0052017.1 486 878 +
Chr2	stalkie_big_nohaplotig	exon	66208684	66209068	100	+	.	Parent=FBgn0052017.1.mrna1;Target=FBgn0052017.1 879 1263 +
Chr2	stalkie_big_nohaplotig	exon	66211210	66211449	100	+	.	Parent=FBgn0052017.1.mrna1;Target=FBgn0052017.1 1264 1503 +
Chr2	stalkie_big_nohaplotig	CDS	66195040	66195079	.	+	0	Parent=FBgn0052017.1.mrna1
Chr2	gffcl	locus	64505814	64507256	.	-	.	ID=RLOC_00017983;geneIDs=FBgn0050491.1.path1;transcripts=FBgn0050491.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64505814	64507256	.	-	.	ID=FBgn0050491.1.mrna1;geneID=FBgn0050491.1.path1;Name=FBgn0050491.1;Dir=sensecoverage=100.0;identity=100.0;matches=1005;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017983
Chr2	stalkie_big_nohaplotig	exon	64505814	64506030	100	-	.	Parent=FBgn0050491.1.mrna1;Target=FBgn0050491.1 789 1005 +
Chr2	stalkie_big_nohaplotig	exon	64506084	64506174	100	-	.	Parent=FBgn0050491.1.mrna1;Target=FBgn0050491.1 698 788 +
Chr2	stalkie_big_nohaplotig	exon	64506231	64506399	100	-	.	Parent=FBgn0050491.1.mrna1;Target=FBgn0050491.1 529 697 +
Chr2	stalkie_big_nohaplotig	exon	64506465	64506621	100	-	.	Parent=FBgn0050491.1.mrna1;Target=FBgn0050491.1 372 528 +
Chr2	stalkie_big_nohaplotig	exon	64506722	64506819	100	-	.	Parent=FBgn0050491.1.mrna1;Target=FBgn0050491.1 274 371 +
Chr2	stalkie_big_nohaplotig	exon	64506932	64507097	100	-	.	Parent=FBgn0050491.1.mrna1;Target=FBgn0050491.1 108 273 +
Chr2	stalkie_big_nohaplotig	exon	64507150	64507256	100	-	.	Parent=FBgn0050491.1.mrna1;Target=FBgn0050491.1 1 107 +
Chr2	stalkie_big_nohaplotig	CDS	64505814	64506030	.	-	1	Parent=FBgn0050491.1.mrna1;Target=FBgn0050491.1 789 1005 +
Chr2	stalkie_big_nohaplotig	CDS	64506084	64506174	.	-	2	Parent=FBgn0050491.1.mrna1;Target=FBgn0050491.1 698 788 +
Chr2	stalkie_big_nohaplotig	CDS	64506231	64506399	.	-	0	Parent=FBgn0050491.1.mrna1;Target=FBgn0050491.1 529 697 +
Chr2	stalkie_big_nohaplotig	CDS	64506465	64506621	.	-	1	Parent=FBgn0050491.1.mrna1;Target=FBgn0050491.1 372 528 +
Chr2	stalkie_big_nohaplotig	CDS	64506722	64506819	.	-	0	Parent=FBgn0050491.1.mrna1;Target=FBgn0050491.1 274 371 +
Chr2	stalkie_big_nohaplotig	CDS	64506932	64507097	.	-	1	Parent=FBgn0050491.1.mrna1;Target=FBgn0050491.1 108 273 +
Chr2	stalkie_big_nohaplotig	CDS	64507150	64507256	.	-	0	Parent=FBgn0050491.1.mrna1;Target=FBgn0050491.1 1 107 +
Chr2	gffcl	locus	64511741	64513589	.	-	.	ID=RLOC_00017984;geneIDs=FBgn0028983.1.path1;transcripts=FBgn0028983.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64511741	64513589	.	-	.	ID=FBgn0028983.1.mrna1;geneID=FBgn0028983.1.path1;Name=FBgn0028983.1;Dir=sensecoverage=100.0;identity=100.0;matches=1146;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017984
Chr2	stalkie_big_nohaplotig	exon	64511741	64511868	100	-	.	Parent=FBgn0028983.1.mrna1;Target=FBgn0028983.1 1019 1146 +
Chr2	stalkie_big_nohaplotig	exon	64511929	64512070	100	-	.	Parent=FBgn0028983.1.mrna1;Target=FBgn0028983.1 877 1018 +
Chr2	stalkie_big_nohaplotig	exon	64512714	64513589	100	-	.	Parent=FBgn0028983.1.mrna1;Target=FBgn0028983.1 1 876 +
Chr2	stalkie_big_nohaplotig	CDS	64511741	64511868	.	-	2	Parent=FBgn0028983.1.mrna1;Target=FBgn0028983.1 1019 1146 +
Chr2	stalkie_big_nohaplotig	CDS	64511929	64512070	.	-	0	Parent=FBgn0028983.1.mrna1;Target=FBgn0028983.1 877 1018 +
Chr2	stalkie_big_nohaplotig	CDS	64512714	64513589	.	-	0	Parent=FBgn0028983.1.mrna1;Target=FBgn0028983.1 1 876 +
Chr2	gffcl	locus	64514885	64519114	.	-	.	ID=RLOC_00017985;geneIDs=FBgn0035073.1.path1;transcripts=FBgn0035073.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64514885	64519114	.	-	.	ID=FBgn0035073.1.mrna1;geneID=FBgn0035073.1.path1;Name=FBgn0035073.1;Dir=sensecoverage=100.0;identity=100.0;matches=3000;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017985
Chr2	stalkie_big_nohaplotig	exon	64514885	64514995	100	-	.	Parent=FBgn0035073.1.mrna1;Target=FBgn0035073.1 2890 3000 +
Chr2	stalkie_big_nohaplotig	exon	64515055	64515234	100	-	.	Parent=FBgn0035073.1.mrna1;Target=FBgn0035073.1 2710 2889 +
Chr2	stalkie_big_nohaplotig	exon	64515291	64515493	100	-	.	Parent=FBgn0035073.1.mrna1;Target=FBgn0035073.1 2507 2709 +
Chr2	stalkie_big_nohaplotig	exon	64516499	64518364	100	-	.	Parent=FBgn0035073.1.mrna1;Target=FBgn0035073.1 641 2506 +
Chr2	stalkie_big_nohaplotig	exon	64518416	64518567	100	-	.	Parent=FBgn0035073.1.mrna1;Target=FBgn0035073.1 489 640 +
Chr2	stalkie_big_nohaplotig	exon	64518627	64519114	100	-	.	Parent=FBgn0035073.1.mrna1;Target=FBgn0035073.1 1 488 +
Chr2	stalkie_big_nohaplotig	CDS	64514885	64514995	.	-	0	Parent=FBgn0035073.1.mrna1;Target=FBgn0035073.1 2890 3000 +
Chr2	stalkie_big_nohaplotig	CDS	64515055	64515234	.	-	0	Parent=FBgn0035073.1.mrna1;Target=FBgn0035073.1 2710 2889 +
Chr2	stalkie_big_nohaplotig	CDS	64515291	64515493	.	-	2	Parent=FBgn0035073.1.mrna1;Target=FBgn0035073.1 2507 2709 +
Chr2	stalkie_big_nohaplotig	CDS	64516499	64518364	.	-	2	Parent=FBgn0035073.1.mrna1;Target=FBgn0035073.1 641 2506 +
Chr2	stalkie_big_nohaplotig	CDS	64518416	64518567	.	-	1	Parent=FBgn0035073.1.mrna1;Target=FBgn0035073.1 489 640 +
Chr2	stalkie_big_nohaplotig	CDS	64518627	64519114	.	-	0	Parent=FBgn0035073.1.mrna1;Target=FBgn0035073.1 1 488 +
Chr2	gffcl	locus	64538951	64540569	.	-	.	ID=RLOC_00017987;geneIDs=FBgn0004407.1.path1,comp143759_c0_seq1.path1;transcripts=FBgn0004407.1.mrna1,comp143759_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64538951	64540569	.	-	.	ID=FBgn0004407.1.mrna1;geneID=FBgn0004407.1.path1;Name=FBgn0004407.1;Dir=sensecoverage=100.0;identity=99.8;matches=1138;mismatches=2;indels=0;unknowns=0;locus=RLOC_00017987
Chr2	stalkie_big_nohaplotig	exon	64538951	64539231	100	-	.	Parent=FBgn0004407.1.mrna1;Target=FBgn0004407.1 860 1140 +
Chr2	stalkie_big_nohaplotig	exon	64539660	64539758	100	-	.	Parent=FBgn0004407.1.mrna1;Target=FBgn0004407.1 761 859 +
Chr2	stalkie_big_nohaplotig	exon	64539810	64540569	99	-	.	Parent=FBgn0004407.1.mrna1;Target=FBgn0004407.1 1 760 +
Chr2	stalkie_big_nohaplotig	CDS	64538951	64539231	.	-	2	Parent=FBgn0004407.1.mrna1;Target=FBgn0004407.1 860 1140 +
Chr2	stalkie_big_nohaplotig	CDS	64539660	64539758	.	-	2	Parent=FBgn0004407.1.mrna1;Target=FBgn0004407.1 761 859 +
Chr2	stalkie_big_nohaplotig	CDS	64539810	64540569	.	-	0	Parent=FBgn0004407.1.mrna1;Target=FBgn0004407.1 1 760 +
Chr2	stalkie_big_nohaplotig	mRNA	64539278	64539683	.	-	.	ID=comp143759_c0_seq1.mrna1;geneID=comp143759_c0_seq1.path1;Name=comp143759_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=406;mismatches=0;indels=0;unknowns=0;Target=comp143759_c0_seq1 406 1 .;CDS_Target=comp143759_c0_seq1 134 3 .;locus=RLOC_00017987
Chr2	stalkie_big_nohaplotig	exon	64539278	64539683	100	-	.	Parent=comp143759_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64539550	64539681	.	-	0	Parent=comp143759_c0_seq1.mrna1
Chr2	gffcl	locus	64540578	64541096	.	-	.	ID=RLOC_00017988;geneIDs=FBgn0064115.1.path1;transcripts=FBgn0064115.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64540578	64541096	.	-	.	ID=FBgn0064115.1.mrna1;geneID=FBgn0064115.1.path1;Name=FBgn0064115.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=519;mismatches=0;indels=0;unknowns=0;Target=FBgn0064115.1 519 1 .;locus=RLOC_00017988
Chr2	stalkie_big_nohaplotig	exon	64540578	64541096	100	-	.	Parent=FBgn0064115.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64540578	64541096	.	-	0	Parent=FBgn0064115.1.mrna1
Chr2	gffcl	locus	64544822	64545674	.	+	.	ID=RLOC_00017989;geneIDs=FBgn0010590.1.path1;transcripts=FBgn0010590.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64544822	64545674	.	+	.	ID=FBgn0010590.1.mrna1;geneID=FBgn0010590.1.path1;Name=FBgn0010590.1;Dir=sensecoverage=100.0;identity=99.9;matches=725;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017989
Chr2	stalkie_big_nohaplotig	exon	64544822	64544914	100	+	.	Parent=FBgn0010590.1.mrna1;Target=FBgn0010590.1 1 93 +
Chr2	stalkie_big_nohaplotig	exon	64544974	64545448	99	+	.	Parent=FBgn0010590.1.mrna1;Target=FBgn0010590.1 94 568 +
Chr2	stalkie_big_nohaplotig	exon	64545517	64545674	100	+	.	Parent=FBgn0010590.1.mrna1;Target=FBgn0010590.1 569 726 +
Chr2	stalkie_big_nohaplotig	CDS	64544822	64544914	.	+	0	Parent=FBgn0010590.1.mrna1;Target=FBgn0010590.1 1 93 +
Chr2	stalkie_big_nohaplotig	CDS	64544974	64545448	.	+	0	Parent=FBgn0010590.1.mrna1;Target=FBgn0010590.1 94 568 +
Chr2	stalkie_big_nohaplotig	CDS	64545517	64545674	.	+	2	Parent=FBgn0010590.1.mrna1;Target=FBgn0010590.1 569 726 +
Chr2	gffcl	locus	64547655	64548833	.	+	.	ID=RLOC_00017990;geneIDs=comp153900_c0_seq1.path1;transcripts=comp153900_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64547655	64548833	.	+	.	ID=comp153900_c0_seq1.mrna1;geneID=comp153900_c0_seq1.path1;Name=comp153900_c0_seq1;Dir=antisensecoverage=98.4;identity=98.5;matches=993;mismatches=7;indels=8;unknowns=0;locus=RLOC_00017990
Chr2	stalkie_big_nohaplotig	exon	64547655	64547976	99	+	.	Parent=comp153900_c0_seq1.mrna1;Target=comp153900_c0_seq1 697 1018 -
Chr2	stalkie_big_nohaplotig	exon	64548040	64548133	100	+	.	Parent=comp153900_c0_seq1.mrna1;Target=comp153900_c0_seq1 603 696 -
Chr2	stalkie_big_nohaplotig	exon	64548201	64548282	100	+	.	Parent=comp153900_c0_seq1.mrna1;Target=comp153900_c0_seq1 521 602 -
Chr2	stalkie_big_nohaplotig	exon	64548331	64548833	97	+	.	Parent=comp153900_c0_seq1.mrna1;Target=comp153900_c0_seq1 12 520 -
Chr2	stalkie_big_nohaplotig	CDS	64547943	64547976	.	+	0	Parent=comp153900_c0_seq1.mrna1;Target=comp153900_c0_seq1 697 730 .
Chr2	stalkie_big_nohaplotig	CDS	64548040	64548133	.	+	2	Parent=comp153900_c0_seq1.mrna1;Target=comp153900_c0_seq1 603 696 .
Chr2	stalkie_big_nohaplotig	CDS	64548201	64548282	.	+	1	Parent=comp153900_c0_seq1.mrna1;Target=comp153900_c0_seq1 521 602 .
Chr2	stalkie_big_nohaplotig	CDS	64548331	64548684	.	+	0	Parent=comp153900_c0_seq1.mrna1;Target=comp153900_c0_seq1 167 520 .
Chr2	gffcl	locus	64548847	64549531	.	-	.	ID=RLOC_00017991;geneIDs=comp150137_c0_seq1.path1;transcripts=comp150137_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64548847	64549531	.	-	.	ID=comp150137_c0_seq1.mrna1;geneID=comp150137_c0_seq1.path1;Name=comp150137_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.7;matches=676;mismatches=8;indels=1;unknowns=0;Target=comp150137_c0_seq1 687 4 .;CDS_Target=comp150137_c0_seq1 89 6 .;locus=RLOC_00017991
Chr2	stalkie_big_nohaplotig	exon	64548847	64549531	98	-	.	Parent=comp150137_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64549446	64549529	.	-	0	Parent=comp150137_c0_seq1.mrna1
Chr2	gffcl	locus	64550033	64550656	.	-	.	ID=RLOC_00017992;geneIDs=FBgn0050423.1.path1;transcripts=FBgn0050423.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64550033	64550656	.	-	.	ID=FBgn0050423.1.mrna1;geneID=FBgn0050423.1.path1;Name=FBgn0050423.1;Dir=sensecoverage=100.0;identity=100.0;matches=401;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017992
Chr2	stalkie_big_nohaplotig	exon	64550033	64550155	100	-	.	Parent=FBgn0050423.1.mrna1;Target=FBgn0050423.1 280 402 +
Chr2	stalkie_big_nohaplotig	exon	64550211	64550466	100	-	.	Parent=FBgn0050423.1.mrna1;Target=FBgn0050423.1 24 279 +
Chr2	stalkie_big_nohaplotig	exon	64550635	64550656	100	-	.	Parent=FBgn0050423.1.mrna1;Target=FBgn0050423.1 1 22 +
Chr2	stalkie_big_nohaplotig	CDS	64550033	64550155	.	-	0	Parent=FBgn0050423.1.mrna1;Target=FBgn0050423.1 280 402 +
Chr2	stalkie_big_nohaplotig	CDS	64550211	64550447	.	-	0	Parent=FBgn0050423.1.mrna1;Target=FBgn0050423.1 43 279 +
Chr2	gffcl	locus	64555693	64557428	.	+	.	ID=RLOC_00017993;geneIDs=comp160209_c1_seq1.path1;transcripts=comp160209_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64555693	64557428	.	+	.	ID=comp160209_c1_seq1.mrna1;geneID=comp160209_c1_seq1.path1;Name=comp160209_c1_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=1608;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017993
Chr2	stalkie_big_nohaplotig	exon	64555693	64556485	100	+	.	Parent=comp160209_c1_seq1.mrna1;Target=comp160209_c1_seq1 816 1608 -
Chr2	stalkie_big_nohaplotig	exon	64556559	64556829	100	+	.	Parent=comp160209_c1_seq1.mrna1;Target=comp160209_c1_seq1 545 815 -
Chr2	stalkie_big_nohaplotig	exon	64556885	64557428	100	+	.	Parent=comp160209_c1_seq1.mrna1;Target=comp160209_c1_seq1 1 544 -
Chr2	stalkie_big_nohaplotig	CDS	64555695	64556485	.	+	0	Parent=comp160209_c1_seq1.mrna1;Target=comp160209_c1_seq1 816 1606 .
Chr2	stalkie_big_nohaplotig	CDS	64556559	64556829	.	+	1	Parent=comp160209_c1_seq1.mrna1;Target=comp160209_c1_seq1 545 815 .
Chr2	stalkie_big_nohaplotig	CDS	64556885	64557061	.	+	0	Parent=comp160209_c1_seq1.mrna1;Target=comp160209_c1_seq1 368 544 .
Chr2	gffcl	locus	64557786	64558611	.	-	.	ID=RLOC_00017994;geneIDs=comp155451_c0_seq1.path1;transcripts=comp155451_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64557786	64558611	.	-	.	ID=comp155451_c0_seq1.mrna1;geneID=comp155451_c0_seq1.path1;Name=comp155451_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=823;mismatches=3;indels=3;unknowns=0;Target=comp155451_c0_seq1 829 1 .;CDS_Target=comp155451_c0_seq1 246 115 .;locus=RLOC_00017994
Chr2	stalkie_big_nohaplotig	exon	64557786	64558611	99	-	.	Parent=comp155451_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64558366	64558497	.	-	0	Parent=comp155451_c0_seq1.mrna1
Chr2	gffcl	locus	64568342	64573135	.	.	.	ID=RLOC_00017995;geneIDs=FBgn0034158.1.path1,comp155688_c0_seq1.path1;transcripts=FBgn0034158.1.mrna1,comp155688_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64568342	64573135	.	+	.	ID=FBgn0034158.1.mrna1;geneID=FBgn0034158.1.path1;Name=FBgn0034158.1;Dir=sensecoverage=100.0;identity=100.0;matches=2135;mismatches=1;indels=0;unknowns=0;locus=RLOC_00017995
Chr2	stalkie_big_nohaplotig	exon	64568342	64568434	100	+	.	Parent=FBgn0034158.1.mrna1;Target=FBgn0034158.1 1 93 +
Chr2	stalkie_big_nohaplotig	exon	64568500	64568936	99	+	.	Parent=FBgn0034158.1.mrna1;Target=FBgn0034158.1 94 530 +
Chr2	stalkie_big_nohaplotig	exon	64569033	64569357	100	+	.	Parent=FBgn0034158.1.mrna1;Target=FBgn0034158.1 531 855 +
Chr2	stalkie_big_nohaplotig	exon	64569434	64569885	100	+	.	Parent=FBgn0034158.1.mrna1;Target=FBgn0034158.1 856 1307 +
Chr2	stalkie_big_nohaplotig	exon	64569942	64570145	100	+	.	Parent=FBgn0034158.1.mrna1;Target=FBgn0034158.1 1308 1511 +
Chr2	stalkie_big_nohaplotig	exon	64572511	64573135	100	+	.	Parent=FBgn0034158.1.mrna1;Target=FBgn0034158.1 1512 2136 +
Chr2	stalkie_big_nohaplotig	CDS	64568342	64568434	.	+	0	Parent=FBgn0034158.1.mrna1;Target=FBgn0034158.1 1 93 +
Chr2	stalkie_big_nohaplotig	CDS	64568500	64568936	.	+	0	Parent=FBgn0034158.1.mrna1;Target=FBgn0034158.1 94 530 +
Chr2	stalkie_big_nohaplotig	CDS	64569033	64569357	.	+	1	Parent=FBgn0034158.1.mrna1;Target=FBgn0034158.1 531 855 +
Chr2	stalkie_big_nohaplotig	CDS	64569434	64569885	.	+	0	Parent=FBgn0034158.1.mrna1;Target=FBgn0034158.1 856 1307 +
Chr2	stalkie_big_nohaplotig	CDS	64569942	64570145	.	+	1	Parent=FBgn0034158.1.mrna1;Target=FBgn0034158.1 1308 1511 +
Chr2	stalkie_big_nohaplotig	CDS	64572511	64573135	.	+	1	Parent=FBgn0034158.1.mrna1;Target=FBgn0034158.1 1512 2136 +
Chr2	stalkie_big_nohaplotig	mRNA	64570122	64571094	.	-	.	ID=comp155688_c0_seq1.mrna1;geneID=comp155688_c0_seq1.path1;Name=comp155688_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=972;mismatches=1;indels=1;unknowns=0;Target=comp155688_c0_seq1 974 1 .;CDS_Target=comp155688_c0_seq1 157 53 .;locus=RLOC_00017995
Chr2	stalkie_big_nohaplotig	exon	64570122	64571094	99	-	.	Parent=comp155688_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64570938	64571042	.	-	0	Parent=comp155688_c0_seq1.mrna1
Chr2	gffcl	locus	64571106	64572097	.	.	.	ID=RLOC_00017996;geneIDs=comp137133_c0_seq1.path1,comp143450_c0_seq1.path1;transcripts=comp137133_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64571106	64571621	.	-	.	ID=comp137133_c0_seq1.mrna1;geneID=comp137133_c0_seq1.path1;Name=comp137133_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=515;mismatches=1;indels=0;unknowns=0;Target=comp137133_c0_seq1 516 1 .;CDS_Target=comp137133_c0_seq1 324 259 .;locus=RLOC_00017996
Chr2	stalkie_big_nohaplotig	exon	64571106	64571621	99	-	.	Parent=comp137133_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64571298	64571363	.	-	0	Parent=comp137133_c0_seq1.mrna1
Chr2	gffcl	locus	64576616	64577200	.	-	.	ID=RLOC_00017998;geneIDs=FBgn0034159.1.path1;transcripts=FBgn0034159.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64576616	64577200	.	-	.	ID=FBgn0034159.1.mrna1;geneID=FBgn0034159.1.path1;Name=FBgn0034159.1;Dir=indeterminatecoverage=99.5;identity=84.4;matches=557;mismatches=28;indels=75;unknowns=0;Target=FBgn0034159.1 663 4 .;locus=RLOC_00017998
Chr2	stalkie_big_nohaplotig	exon	64576616	64577200	84	-	.	Parent=FBgn0034159.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64576616	64577200	.	-	0	Parent=FBgn0034159.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64605049	66376012	.	+	.	ID=comp147601_c0_seq1.mrna1;geneID=comp147601_c0_seq1.path1;Name=comp147601_c0_seq1;Dir=indeterminatecoverage=96.0;identity=92.1;matches=1068;mismatches=38;indels=53;unknowns=0;locus=RLOC_00017999
Chr2	stalkie_big_nohaplotig	exon	64605049	64605054	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 63 58 .
Chr2	stalkie_big_nohaplotig	exon	64632251	64632258	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 76 69 .
Chr2	stalkie_big_nohaplotig	exon	64654301	64654306	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 82 77 .
Chr2	stalkie_big_nohaplotig	exon	64655281	64655285	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 87 83 .
Chr2	stalkie_big_nohaplotig	exon	64661930	64661935	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 93 88 .
Chr2	stalkie_big_nohaplotig	exon	64665422	64665427	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 99 94 .
Chr2	stalkie_big_nohaplotig	exon	64671198	64671200	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 102 100 .
Chr2	stalkie_big_nohaplotig	exon	64682898	64682899	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 104 103 .
Chr2	stalkie_big_nohaplotig	exon	64696707	64696708	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 106 105 .
Chr2	stalkie_big_nohaplotig	exon	64712316	64712326	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 117 107 .
Chr2	stalkie_big_nohaplotig	exon	64717962	64717963	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 119 118 .
Chr2	stalkie_big_nohaplotig	exon	64737336	64737340	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 124 120 .
Chr2	stalkie_big_nohaplotig	exon	64744724	64744728	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 129 125 .
Chr2	stalkie_big_nohaplotig	exon	64762790	64762817	42	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 141 130 .
Chr2	stalkie_big_nohaplotig	exon	64771597	64771602	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 158 153 .
Chr2	stalkie_big_nohaplotig	exon	64801844	64801848	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 163 159 .
Chr2	stalkie_big_nohaplotig	exon	64809221	64809222	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 165 164 .
Chr2	stalkie_big_nohaplotig	exon	64813296	64813297	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 167 166 .
Chr2	stalkie_big_nohaplotig	exon	64815528	64815535	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 175 168 .
Chr2	stalkie_big_nohaplotig	exon	64823296	64823297	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 177 176 .
Chr2	stalkie_big_nohaplotig	exon	64828301	64828332	43	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 191 178 .
Chr2	stalkie_big_nohaplotig	exon	64855777	64855778	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 193 192 .
Chr2	stalkie_big_nohaplotig	exon	64858282	64858291	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 203 194 .
Chr2	stalkie_big_nohaplotig	exon	64864088	64864108	40	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 231 207 .
Chr2	stalkie_big_nohaplotig	exon	64865166	64865175	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 274 265 .
Chr2	stalkie_big_nohaplotig	exon	64865188	64865230	57	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 364 318 .
Chr2	stalkie_big_nohaplotig	exon	64865542	64865553	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 419 408 .
Chr2	stalkie_big_nohaplotig	exon	64867311	64867319	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 428 420 .
Chr2	stalkie_big_nohaplotig	exon	64889633	64889637	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 500 496 .
Chr2	stalkie_big_nohaplotig	exon	64894129	64894136	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 508 501 .
Chr2	stalkie_big_nohaplotig	exon	64894820	64894822	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 531 529 .
Chr2	stalkie_big_nohaplotig	exon	64899010	64899022	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 544 532 .
Chr2	stalkie_big_nohaplotig	exon	64911753	64911760	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 552 545 .
Chr2	stalkie_big_nohaplotig	exon	64917056	64917067	83	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 564 553 .
Chr2	stalkie_big_nohaplotig	exon	64934446	64934454	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 573 565 .
Chr2	stalkie_big_nohaplotig	exon	64934592	64934611	90	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 607 588 .
Chr2	stalkie_big_nohaplotig	exon	64937876	64937879	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 611 608 .
Chr2	stalkie_big_nohaplotig	exon	64939091	64939097	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 618 612 .
Chr2	stalkie_big_nohaplotig	exon	64943126	64943139	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 632 619 .
Chr2	stalkie_big_nohaplotig	exon	64950769	64950772	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 636 633 .
Chr2	stalkie_big_nohaplotig	exon	64953753	64953754	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 638 637 .
Chr2	stalkie_big_nohaplotig	exon	65904770	65904771	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 640 639 .
Chr2	stalkie_big_nohaplotig	exon	65910723	65910730	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 648 641 .
Chr2	stalkie_big_nohaplotig	exon	65911604	65911611	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 656 649 .
Chr2	stalkie_big_nohaplotig	exon	65920129	65920134	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 662 657 .
Chr2	stalkie_big_nohaplotig	exon	66273044	66273049	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 668 663 .
Chr2	stalkie_big_nohaplotig	exon	66276144	66276147	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 672 669 .
Chr2	stalkie_big_nohaplotig	exon	66279964	66279970	71	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 679 673 .
Chr2	stalkie_big_nohaplotig	exon	66283355	66283356	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 681 680 .
Chr2	stalkie_big_nohaplotig	exon	66289009	66289012	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 685 682 .
Chr2	stalkie_big_nohaplotig	exon	66295077	66295079	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 688 686 .
Chr2	stalkie_big_nohaplotig	exon	66315708	66315717	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 698 689 .
Chr2	stalkie_big_nohaplotig	exon	66320902	66320903	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 700 699 .
Chr2	stalkie_big_nohaplotig	exon	66325439	66325440	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 702 701 .
Chr2	stalkie_big_nohaplotig	exon	66329025	66329026	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 704 703 .
Chr2	stalkie_big_nohaplotig	exon	66329236	66329240	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 709 705 .
Chr2	stalkie_big_nohaplotig	exon	66336672	66336673	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 711 710 .
Chr2	stalkie_big_nohaplotig	exon	66346847	66346862	100	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 727 712 .
Chr2	stalkie_big_nohaplotig	exon	66375329	66376012	97	+	.	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 1414 728 .
Chr2	stalkie_big_nohaplotig	CDS	64605051	64605054	.	+	0	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 63 60 .
Chr2	stalkie_big_nohaplotig	CDS	64632251	64632253	.	+	2	Parent=comp147601_c0_seq1.mrna1;Target=comp147601_c0_seq1 71 69 .
Chr2	stalkie_big_nohaplotig	mRNA	66249807	66325586	.	+	.	ID=comp162902_c0_seq1.mrna1;geneID=comp162902_c0_seq1.path1;Name=comp162902_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=4721;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017999
Chr2	stalkie_big_nohaplotig	exon	66249807	66250243	100	+	.	Parent=comp162902_c0_seq1.mrna1;Target=comp162902_c0_seq1 4285 4721 -
Chr2	stalkie_big_nohaplotig	exon	66252972	66253042	100	+	.	Parent=comp162902_c0_seq1.mrna1;Target=comp162902_c0_seq1 4214 4284 -
Chr2	stalkie_big_nohaplotig	exon	66253107	66253479	100	+	.	Parent=comp162902_c0_seq1.mrna1;Target=comp162902_c0_seq1 3841 4213 -
Chr2	stalkie_big_nohaplotig	exon	66255270	66255318	100	+	.	Parent=comp162902_c0_seq1.mrna1;Target=comp162902_c0_seq1 3792 3840 -
Chr2	stalkie_big_nohaplotig	exon	66266457	66266554	100	+	.	Parent=comp162902_c0_seq1.mrna1;Target=comp162902_c0_seq1 3694 3791 -
Chr2	stalkie_big_nohaplotig	exon	66289124	66289235	100	+	.	Parent=comp162902_c0_seq1.mrna1;Target=comp162902_c0_seq1 3582 3693 -
Chr2	stalkie_big_nohaplotig	exon	66302870	66302957	100	+	.	Parent=comp162902_c0_seq1.mrna1;Target=comp162902_c0_seq1 3494 3581 -
Chr2	stalkie_big_nohaplotig	exon	66303022	66303105	100	+	.	Parent=comp162902_c0_seq1.mrna1;Target=comp162902_c0_seq1 3410 3493 -
Chr2	stalkie_big_nohaplotig	exon	66303391	66303537	100	+	.	Parent=comp162902_c0_seq1.mrna1;Target=comp162902_c0_seq1 3263 3409 -
Chr2	stalkie_big_nohaplotig	exon	66311925	66312117	100	+	.	Parent=comp162902_c0_seq1.mrna1;Target=comp162902_c0_seq1 3070 3262 -
Chr2	stalkie_big_nohaplotig	exon	66312859	66313024	100	+	.	Parent=comp162902_c0_seq1.mrna1;Target=comp162902_c0_seq1 2904 3069 -
Chr2	stalkie_big_nohaplotig	exon	66316542	66316611	100	+	.	Parent=comp162902_c0_seq1.mrna1;Target=comp162902_c0_seq1 2834 2903 -
Chr2	stalkie_big_nohaplotig	exon	66320106	66320885	100	+	.	Parent=comp162902_c0_seq1.mrna1;Target=comp162902_c0_seq1 2054 2833 -
Chr2	stalkie_big_nohaplotig	exon	66323534	66325586	100	+	.	Parent=comp162902_c0_seq1.mrna1;Target=comp162902_c0_seq1 1 2053 -
Chr2	stalkie_big_nohaplotig	CDS	66320863	66320885	.	+	0	Parent=comp162902_c0_seq1.mrna1;Target=comp162902_c0_seq1 2054 2076 .
Chr2	stalkie_big_nohaplotig	CDS	66323534	66325283	.	+	1	Parent=comp162902_c0_seq1.mrna1;Target=comp162902_c0_seq1 304 2053 .
Chr2	stalkie_big_nohaplotig	mRNA	66253264	66325280	.	+	.	ID=FBgn0085432.1.mrna1;geneID=FBgn0085432.1.path1;Name=FBgn0085432.1;Dir=sensecoverage=100.0;identity=100.0;matches=2970;mismatches=0;indels=0;unknowns=0;locus=RLOC_00017999
Chr2	stalkie_big_nohaplotig	exon	66253264	66253479	100	+	.	Parent=FBgn0085432.1.mrna1;Target=FBgn0085432.1 1 216 +
Chr2	stalkie_big_nohaplotig	exon	66255270	66255318	100	+	.	Parent=FBgn0085432.1.mrna1;Target=FBgn0085432.1 217 265 +
Chr2	stalkie_big_nohaplotig	exon	66266457	66266554	100	+	.	Parent=FBgn0085432.1.mrna1;Target=FBgn0085432.1 266 363 +
Chr2	stalkie_big_nohaplotig	exon	66289124	66289235	100	+	.	Parent=FBgn0085432.1.mrna1;Target=FBgn0085432.1 364 475 +
Chr2	stalkie_big_nohaplotig	exon	66302870	66302957	100	+	.	Parent=FBgn0085432.1.mrna1;Target=FBgn0085432.1 476 563 +
Chr2	stalkie_big_nohaplotig	exon	66303022	66303105	100	+	.	Parent=FBgn0085432.1.mrna1;Target=FBgn0085432.1 564 647 +
Chr2	stalkie_big_nohaplotig	exon	66303391	66303537	100	+	.	Parent=FBgn0085432.1.mrna1;Target=FBgn0085432.1 648 794 +
Chr2	stalkie_big_nohaplotig	exon	66311925	66312117	100	+	.	Parent=FBgn0085432.1.mrna1;Target=FBgn0085432.1 795 987 +
Chr2	stalkie_big_nohaplotig	exon	66312859	66313024	100	+	.	Parent=FBgn0085432.1.mrna1;Target=FBgn0085432.1 988 1153 +
Chr2	stalkie_big_nohaplotig	exon	66316542	66316611	100	+	.	Parent=FBgn0085432.1.mrna1;Target=FBgn0085432.1 1154 1223 +
Chr2	stalkie_big_nohaplotig	exon	66323534	66325280	100	+	.	Parent=FBgn0085432.1.mrna1;Target=FBgn0085432.1 1224 2970 +
Chr2	stalkie_big_nohaplotig	CDS	66253264	66253479	.	+	0	Parent=FBgn0085432.1.mrna1;Target=FBgn0085432.1 1 216 +
Chr2	stalkie_big_nohaplotig	CDS	66255270	66255318	.	+	0	Parent=FBgn0085432.1.mrna1;Target=FBgn0085432.1 217 265 +
Chr2	stalkie_big_nohaplotig	CDS	66266457	66266554	.	+	2	Parent=FBgn0085432.1.mrna1;Target=FBgn0085432.1 266 363 +
Chr2	stalkie_big_nohaplotig	CDS	66289124	66289235	.	+	0	Parent=FBgn0085432.1.mrna1;Target=FBgn0085432.1 364 475 +
Chr2	stalkie_big_nohaplotig	CDS	66302870	66302957	.	+	2	Parent=FBgn0085432.1.mrna1;Target=FBgn0085432.1 476 563 +
Chr2	stalkie_big_nohaplotig	CDS	66303022	66303105	.	+	1	Parent=FBgn0085432.1.mrna1;Target=FBgn0085432.1 564 647 +
Chr2	stalkie_big_nohaplotig	CDS	66303391	66303537	.	+	1	Parent=FBgn0085432.1.mrna1;Target=FBgn0085432.1 648 794 +
Chr2	stalkie_big_nohaplotig	CDS	66311925	66312117	.	+	1	Parent=FBgn0085432.1.mrna1;Target=FBgn0085432.1 795 987 +
Chr2	stalkie_big_nohaplotig	CDS	66312859	66313024	.	+	0	Parent=FBgn0085432.1.mrna1;Target=FBgn0085432.1 988 1153 +
Chr2	stalkie_big_nohaplotig	CDS	66316542	66316611	.	+	2	Parent=FBgn0085432.1.mrna1;Target=FBgn0085432.1 1154 1223 +
Chr2	stalkie_big_nohaplotig	CDS	66323534	66325280	.	+	1	Parent=FBgn0085432.1.mrna1;Target=FBgn0085432.1 1224 2970 +
Chr2	gffcl	locus	64612274	64614358	.	-	.	ID=RLOC_00018000;geneIDs=FBgn0033158.1.path1;transcripts=FBgn0033158.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64612274	64614358	.	-	.	ID=FBgn0033158.1.mrna1;geneID=FBgn0033158.1.path1;Name=FBgn0033158.1;Dir=sensecoverage=100.0;identity=100.0;matches=1101;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018000
Chr2	stalkie_big_nohaplotig	exon	64612274	64613332	100	-	.	Parent=FBgn0033158.1.mrna1;Target=FBgn0033158.1 43 1101 +
Chr2	stalkie_big_nohaplotig	exon	64614317	64614358	100	-	.	Parent=FBgn0033158.1.mrna1;Target=FBgn0033158.1 1 42 +
Chr2	stalkie_big_nohaplotig	CDS	64612274	64613332	.	-	0	Parent=FBgn0033158.1.mrna1;Target=FBgn0033158.1 43 1101 +
Chr2	stalkie_big_nohaplotig	CDS	64614317	64614358	.	-	0	Parent=FBgn0033158.1.mrna1;Target=FBgn0033158.1 1 42 +
Chr2	gffcl	locus	64637024	64646484	.	+	.	ID=RLOC_00018001;geneIDs=FBgn0034400.1.path1;transcripts=FBgn0034400.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64637024	64646484	.	+	.	ID=FBgn0034400.1.mrna1;geneID=FBgn0034400.1.path1;Name=FBgn0034400.1;Dir=sensecoverage=100.0;identity=100.0;matches=8169;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018001
Chr2	stalkie_big_nohaplotig	exon	64637024	64637233	100	+	.	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 1 210 +
Chr2	stalkie_big_nohaplotig	exon	64637599	64637780	100	+	.	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 211 392 +
Chr2	stalkie_big_nohaplotig	exon	64637840	64638770	100	+	.	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 393 1323 +
Chr2	stalkie_big_nohaplotig	exon	64638891	64639186	100	+	.	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 1324 1619 +
Chr2	stalkie_big_nohaplotig	exon	64639251	64639539	100	+	.	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 1620 1908 +
Chr2	stalkie_big_nohaplotig	exon	64639601	64640408	100	+	.	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 1909 2716 +
Chr2	stalkie_big_nohaplotig	exon	64640495	64640603	100	+	.	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 2717 2825 +
Chr2	stalkie_big_nohaplotig	exon	64640660	64644377	100	+	.	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 2826 6543 +
Chr2	stalkie_big_nohaplotig	exon	64644440	64645316	100	+	.	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 6544 7420 +
Chr2	stalkie_big_nohaplotig	exon	64645543	64645738	100	+	.	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 7421 7616 +
Chr2	stalkie_big_nohaplotig	exon	64645847	64646186	100	+	.	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 7617 7956 +
Chr2	stalkie_big_nohaplotig	exon	64646272	64646484	100	+	.	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 7957 8169 +
Chr2	stalkie_big_nohaplotig	CDS	64637024	64637233	.	+	0	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 1 210 +
Chr2	stalkie_big_nohaplotig	CDS	64637599	64637780	.	+	0	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 211 392 +
Chr2	stalkie_big_nohaplotig	CDS	64637840	64638770	.	+	1	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 393 1323 +
Chr2	stalkie_big_nohaplotig	CDS	64638891	64639186	.	+	0	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 1324 1619 +
Chr2	stalkie_big_nohaplotig	CDS	64639251	64639539	.	+	1	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 1620 1908 +
Chr2	stalkie_big_nohaplotig	CDS	64639601	64640408	.	+	0	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 1909 2716 +
Chr2	stalkie_big_nohaplotig	CDS	64640495	64640603	.	+	2	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 2717 2825 +
Chr2	stalkie_big_nohaplotig	CDS	64640660	64644377	.	+	1	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 2826 6543 +
Chr2	stalkie_big_nohaplotig	CDS	64644440	64645316	.	+	0	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 6544 7420 +
Chr2	stalkie_big_nohaplotig	CDS	64645543	64645738	.	+	2	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 7421 7616 +
Chr2	stalkie_big_nohaplotig	CDS	64645847	64646186	.	+	1	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 7617 7956 +
Chr2	stalkie_big_nohaplotig	CDS	64646272	64646484	.	+	0	Parent=FBgn0034400.1.mrna1;Target=FBgn0034400.1 7957 8169 +
Chr2	gffcl	locus	64650534	64653337	.	-	.	ID=RLOC_00018002;geneIDs=FBgn0034399.1.path1;transcripts=FBgn0034399.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64650534	64653337	.	-	.	ID=FBgn0034399.1.mrna1;geneID=FBgn0034399.1.path1;Name=FBgn0034399.1;Dir=sensecoverage=100.0;identity=100.0;matches=459;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018002
Chr2	stalkie_big_nohaplotig	exon	64650534	64650622	100	-	.	Parent=FBgn0034399.1.mrna1;Target=FBgn0034399.1 371 459 +
Chr2	stalkie_big_nohaplotig	exon	64652578	64652740	100	-	.	Parent=FBgn0034399.1.mrna1;Target=FBgn0034399.1 208 370 +
Chr2	stalkie_big_nohaplotig	exon	64652793	64652872	100	-	.	Parent=FBgn0034399.1.mrna1;Target=FBgn0034399.1 128 207 +
Chr2	stalkie_big_nohaplotig	exon	64653211	64653337	100	-	.	Parent=FBgn0034399.1.mrna1;Target=FBgn0034399.1 1 127 +
Chr2	stalkie_big_nohaplotig	CDS	64650534	64650622	.	-	2	Parent=FBgn0034399.1.mrna1;Target=FBgn0034399.1 371 459 +
Chr2	stalkie_big_nohaplotig	CDS	64652578	64652740	.	-	0	Parent=FBgn0034399.1.mrna1;Target=FBgn0034399.1 208 370 +
Chr2	stalkie_big_nohaplotig	CDS	64652793	64652872	.	-	2	Parent=FBgn0034399.1.mrna1;Target=FBgn0034399.1 128 207 +
Chr2	stalkie_big_nohaplotig	CDS	64653211	64653337	.	-	0	Parent=FBgn0034399.1.mrna1;Target=FBgn0034399.1 1 127 +
Chr2	gffcl	locus	64671224	64672743	.	+	.	ID=RLOC_00018003;geneIDs=FBgn0034709.1.path1;transcripts=FBgn0034709.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64671224	64672743	.	+	.	ID=FBgn0034709.1.mrna1;geneID=FBgn0034709.1.path1;Name=FBgn0034709.1;Dir=sensecoverage=100.0;identity=99.7;matches=1307;mismatches=4;indels=0;unknowns=0;locus=RLOC_00018003
Chr2	stalkie_big_nohaplotig	exon	64671224	64671407	98	+	.	Parent=FBgn0034709.1.mrna1;Target=FBgn0034709.1 1 184 +
Chr2	stalkie_big_nohaplotig	exon	64671476	64672115	100	+	.	Parent=FBgn0034709.1.mrna1;Target=FBgn0034709.1 185 824 +
Chr2	stalkie_big_nohaplotig	exon	64672180	64672525	99	+	.	Parent=FBgn0034709.1.mrna1;Target=FBgn0034709.1 825 1170 +
Chr2	stalkie_big_nohaplotig	exon	64672603	64672743	100	+	.	Parent=FBgn0034709.1.mrna1;Target=FBgn0034709.1 1171 1311 +
Chr2	stalkie_big_nohaplotig	CDS	64671224	64671407	.	+	0	Parent=FBgn0034709.1.mrna1;Target=FBgn0034709.1 1 184 +
Chr2	stalkie_big_nohaplotig	CDS	64671476	64672115	.	+	2	Parent=FBgn0034709.1.mrna1;Target=FBgn0034709.1 185 824 +
Chr2	stalkie_big_nohaplotig	CDS	64672180	64672525	.	+	1	Parent=FBgn0034709.1.mrna1;Target=FBgn0034709.1 825 1170 +
Chr2	stalkie_big_nohaplotig	CDS	64672603	64672743	.	+	0	Parent=FBgn0034709.1.mrna1;Target=FBgn0034709.1 1171 1311 +
Chr2	gffcl	locus	64678398	64680337	.	+	.	ID=RLOC_00018004;geneIDs=comp160917_c0_seq1.path1;transcripts=comp160917_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64678398	64680337	.	+	.	ID=comp160917_c0_seq1.mrna1;geneID=comp160917_c0_seq1.path1;Name=comp160917_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=1891;mismatches=43;indels=18;unknowns=0;Target=comp160917_c0_seq1 1946 1 .;CDS_Target=comp160917_c0_seq1 913 833 .;locus=RLOC_00018004
Chr2	stalkie_big_nohaplotig	exon	64678398	64680337	96	+	.	Parent=comp160917_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64679220	64679298	.	+	0	Parent=comp160917_c0_seq1.mrna1
Chr2	gffcl	locus	64680410	64681063	.	+	.	ID=RLOC_00018005;geneIDs=comp153372_c0_seq1.path1;transcripts=comp153372_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64680410	64681063	.	+	.	ID=comp153372_c0_seq1.mrna1;geneID=comp153372_c0_seq1.path1;Name=comp153372_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=642;mismatches=6;indels=6;unknowns=0;Target=comp153372_c0_seq1 648 1 .;CDS_Target=comp153372_c0_seq1 444 283 .;locus=RLOC_00018005
Chr2	stalkie_big_nohaplotig	exon	64680410	64681063	98	+	.	Parent=comp153372_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64680692	64680853	.	+	0	Parent=comp153372_c0_seq1.mrna1
Chr2	gffcl	locus	64718129	64718898	.	-	.	ID=RLOC_00018007;geneIDs=comp137359_c0_seq1.path1;transcripts=comp137359_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64718129	64718898	.	-	.	ID=comp137359_c0_seq1.mrna1;geneID=comp137359_c0_seq1.path1;Name=comp137359_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=769;mismatches=1;indels=0;unknowns=0;Target=comp137359_c0_seq1 770 1 .;CDS_Target=comp137359_c0_seq1 480 370 .;locus=RLOC_00018007
Chr2	stalkie_big_nohaplotig	exon	64718129	64718898	99	-	.	Parent=comp137359_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64718419	64718529	.	-	0	Parent=comp137359_c0_seq1.mrna1
Chr2	gffcl	locus	64723332	64724301	.	+	.	ID=RLOC_00018008;geneIDs=comp141831_c0_seq1.path1;transcripts=comp141831_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64723332	64724301	.	+	.	ID=comp141831_c0_seq1.mrna1;geneID=comp141831_c0_seq1.path1;Name=comp141831_c0_seq1;Dir=sensecoverage=99.8;identity=99.7;matches=573;mismatches=2;indels=0;unknowns=0;Target=comp141831_c0_seq1 132 224 +;locus=RLOC_00018008
Chr2	stalkie_big_nohaplotig	exon	64723332	64723364	93	+	.	Parent=comp141831_c0_seq1.mrna1;Target=comp141831_c0_seq1 2 34 +
Chr2	stalkie_big_nohaplotig	exon	64723760	64724301	100	+	.	Parent=comp141831_c0_seq1.mrna1;Target=comp141831_c0_seq1 35 576 +
Chr2	stalkie_big_nohaplotig	CDS	64723857	64723949	.	+	0	Parent=comp141831_c0_seq1.mrna1
Chr2	gffcl	locus	64725330	64728653	.	+	.	ID=RLOC_00018009;geneIDs=FBgn0034435.1.path1;transcripts=FBgn0034435.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64725330	64728653	.	+	.	ID=FBgn0034435.1.mrna1;geneID=FBgn0034435.1.path1;Name=FBgn0034435.1;Dir=sensecoverage=100.0;identity=99.9;matches=1538;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018009
Chr2	stalkie_big_nohaplotig	exon	64725330	64725662	100	+	.	Parent=FBgn0034435.1.mrna1;Target=FBgn0034435.1 1 333 +
Chr2	stalkie_big_nohaplotig	exon	64725731	64726057	100	+	.	Parent=FBgn0034435.1.mrna1;Target=FBgn0034435.1 334 660 +
Chr2	stalkie_big_nohaplotig	exon	64726422	64726612	100	+	.	Parent=FBgn0034435.1.mrna1;Target=FBgn0034435.1 661 851 +
Chr2	stalkie_big_nohaplotig	exon	64726674	64726850	100	+	.	Parent=FBgn0034435.1.mrna1;Target=FBgn0034435.1 852 1028 +
Chr2	stalkie_big_nohaplotig	exon	64727922	64728068	100	+	.	Parent=FBgn0034435.1.mrna1;Target=FBgn0034435.1 1029 1175 +
Chr2	stalkie_big_nohaplotig	exon	64728174	64728314	100	+	.	Parent=FBgn0034435.1.mrna1;Target=FBgn0034435.1 1176 1316 +
Chr2	stalkie_big_nohaplotig	exon	64728368	64728490	99	+	.	Parent=FBgn0034435.1.mrna1;Target=FBgn0034435.1 1317 1439 +
Chr2	stalkie_big_nohaplotig	exon	64728554	64728653	100	+	.	Parent=FBgn0034435.1.mrna1;Target=FBgn0034435.1 1440 1539 +
Chr2	stalkie_big_nohaplotig	CDS	64725330	64725662	.	+	0	Parent=FBgn0034435.1.mrna1;Target=FBgn0034435.1 1 333 +
Chr2	stalkie_big_nohaplotig	CDS	64725731	64726057	.	+	0	Parent=FBgn0034435.1.mrna1;Target=FBgn0034435.1 334 660 +
Chr2	stalkie_big_nohaplotig	CDS	64726422	64726612	.	+	0	Parent=FBgn0034435.1.mrna1;Target=FBgn0034435.1 661 851 +
Chr2	stalkie_big_nohaplotig	CDS	64726674	64726850	.	+	1	Parent=FBgn0034435.1.mrna1;Target=FBgn0034435.1 852 1028 +
Chr2	stalkie_big_nohaplotig	CDS	64727922	64728068	.	+	1	Parent=FBgn0034435.1.mrna1;Target=FBgn0034435.1 1029 1175 +
Chr2	stalkie_big_nohaplotig	CDS	64728174	64728314	.	+	1	Parent=FBgn0034435.1.mrna1;Target=FBgn0034435.1 1176 1316 +
Chr2	stalkie_big_nohaplotig	CDS	64728368	64728490	.	+	1	Parent=FBgn0034435.1.mrna1;Target=FBgn0034435.1 1317 1439 +
Chr2	stalkie_big_nohaplotig	CDS	64728554	64728653	.	+	1	Parent=FBgn0034435.1.mrna1;Target=FBgn0034435.1 1440 1539 +
Chr2	gffcl	locus	64728830	64729198	.	-	.	ID=RLOC_00018010;geneIDs=comp64316_c0_seq1.path1;transcripts=comp64316_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64728830	64729198	.	-	.	ID=comp64316_c0_seq1.mrna1;geneID=comp64316_c0_seq1.path1;Name=comp64316_c0_seq1;Dir=indeterminatecoverage=85.0;identity=100.0;matches=369;mismatches=0;indels=0;unknowns=0;Target=comp64316_c0_seq1 434 66 .;CDS_Target=comp64316_c0_seq1 343 302 .;locus=RLOC_00018010
Chr2	stalkie_big_nohaplotig	exon	64728830	64729198	100	-	.	Parent=comp64316_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64728921	64728962	.	-	0	Parent=comp64316_c0_seq1.mrna1
Chr2	gffcl	locus	64756226	64761454	.	+	.	ID=RLOC_00018011;geneIDs=FBgn0034436.1.path1;transcripts=FBgn0034436.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64756226	64761454	.	+	.	ID=FBgn0034436.1.mrna1;geneID=FBgn0034436.1.path1;Name=FBgn0034436.1;Dir=sensecoverage=100.0;identity=99.8;matches=2683;mismatches=5;indels=0;unknowns=0;locus=RLOC_00018011
Chr2	stalkie_big_nohaplotig	exon	64756226	64756351	100	+	.	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 1 126 +
Chr2	stalkie_big_nohaplotig	exon	64757216	64757696	100	+	.	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 127 607 +
Chr2	stalkie_big_nohaplotig	exon	64757763	64757777	93	+	.	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 608 622 +
Chr2	stalkie_big_nohaplotig	exon	64757840	64757999	100	+	.	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 623 782 +
Chr2	stalkie_big_nohaplotig	exon	64758052	64758136	100	+	.	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 783 867 +
Chr2	stalkie_big_nohaplotig	exon	64758196	64758316	100	+	.	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 868 988 +
Chr2	stalkie_big_nohaplotig	exon	64758598	64758752	100	+	.	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 989 1143 +
Chr2	stalkie_big_nohaplotig	exon	64758810	64759193	99	+	.	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 1144 1527 +
Chr2	stalkie_big_nohaplotig	exon	64759268	64759448	100	+	.	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 1528 1708 +
Chr2	stalkie_big_nohaplotig	exon	64759511	64759695	100	+	.	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 1709 1893 +
Chr2	stalkie_big_nohaplotig	exon	64760252	64760395	99	+	.	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 1894 2037 +
Chr2	stalkie_big_nohaplotig	exon	64760452	64760551	100	+	.	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 2038 2137 +
Chr2	stalkie_big_nohaplotig	exon	64760612	64760714	98	+	.	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 2138 2240 +
Chr2	stalkie_big_nohaplotig	exon	64760785	64761067	100	+	.	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 2241 2523 +
Chr2	stalkie_big_nohaplotig	exon	64761290	64761454	100	+	.	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 2524 2688 +
Chr2	stalkie_big_nohaplotig	CDS	64756226	64756351	.	+	0	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 1 126 +
Chr2	stalkie_big_nohaplotig	CDS	64757216	64757696	.	+	0	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 127 607 +
Chr2	stalkie_big_nohaplotig	CDS	64757763	64757777	.	+	2	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 608 622 +
Chr2	stalkie_big_nohaplotig	CDS	64757840	64757999	.	+	2	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 623 782 +
Chr2	stalkie_big_nohaplotig	CDS	64758052	64758136	.	+	1	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 783 867 +
Chr2	stalkie_big_nohaplotig	CDS	64758196	64758316	.	+	0	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 868 988 +
Chr2	stalkie_big_nohaplotig	CDS	64758598	64758752	.	+	2	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 989 1143 +
Chr2	stalkie_big_nohaplotig	CDS	64758810	64759193	.	+	0	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 1144 1527 +
Chr2	stalkie_big_nohaplotig	CDS	64759268	64759448	.	+	0	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 1528 1708 +
Chr2	stalkie_big_nohaplotig	CDS	64759511	64759695	.	+	2	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 1709 1893 +
Chr2	stalkie_big_nohaplotig	CDS	64760252	64760395	.	+	0	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 1894 2037 +
Chr2	stalkie_big_nohaplotig	CDS	64760452	64760551	.	+	0	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 2038 2137 +
Chr2	stalkie_big_nohaplotig	CDS	64760612	64760714	.	+	2	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 2138 2240 +
Chr2	stalkie_big_nohaplotig	CDS	64760785	64761067	.	+	1	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 2241 2523 +
Chr2	stalkie_big_nohaplotig	CDS	64761290	64761454	.	+	0	Parent=FBgn0034436.1.mrna1;Target=FBgn0034436.1 2524 2688 +
Chr2	gffcl	locus	64766096	64773159	.	+	.	ID=RLOC_00018012;geneIDs=FBgn0034437.1.path1;transcripts=FBgn0034437.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64766096	64773159	.	+	.	ID=FBgn0034437.1.mrna1;geneID=FBgn0034437.1.path1;Name=FBgn0034437.1;Dir=sensecoverage=75.0;identity=98.4;matches=1931;mismatches=31;indels=0;unknowns=0;locus=RLOC_00018012
Chr2	stalkie_big_nohaplotig	exon	64766096	64766793	100	+	.	Parent=FBgn0034437.1.mrna1;Target=FBgn0034437.1 1 698 +
Chr2	stalkie_big_nohaplotig	exon	64766848	64766932	100	+	.	Parent=FBgn0034437.1.mrna1;Target=FBgn0034437.1 699 783 +
Chr2	stalkie_big_nohaplotig	exon	64766995	64767270	99	+	.	Parent=FBgn0034437.1.mrna1;Target=FBgn0034437.1 784 1059 +
Chr2	stalkie_big_nohaplotig	exon	64767323	64767414	100	+	.	Parent=FBgn0034437.1.mrna1;Target=FBgn0034437.1 1060 1151 +
Chr2	stalkie_big_nohaplotig	exon	64772165	64772462	99	+	.	Parent=FBgn0034437.1.mrna1;Target=FBgn0034437.1 1152 1449 +
Chr2	stalkie_big_nohaplotig	exon	64772523	64772703	97	+	.	Parent=FBgn0034437.1.mrna1;Target=FBgn0034437.1 1450 1630 +
Chr2	stalkie_big_nohaplotig	exon	64772772	64772959	92	+	.	Parent=FBgn0034437.1.mrna1;Target=FBgn0034437.1 1631 1818 +
Chr2	stalkie_big_nohaplotig	exon	64773016	64773159	93	+	.	Parent=FBgn0034437.1.mrna1;Target=FBgn0034437.1 1819 1962 +
Chr2	stalkie_big_nohaplotig	CDS	64766096	64766793	.	+	0	Parent=FBgn0034437.1.mrna1;Target=FBgn0034437.1 1 698 +
Chr2	stalkie_big_nohaplotig	CDS	64766848	64766932	.	+	1	Parent=FBgn0034437.1.mrna1;Target=FBgn0034437.1 699 783 +
Chr2	stalkie_big_nohaplotig	CDS	64766995	64767270	.	+	0	Parent=FBgn0034437.1.mrna1;Target=FBgn0034437.1 784 1059 +
Chr2	stalkie_big_nohaplotig	CDS	64767323	64767414	.	+	0	Parent=FBgn0034437.1.mrna1;Target=FBgn0034437.1 1060 1151 +
Chr2	stalkie_big_nohaplotig	CDS	64772165	64772462	.	+	1	Parent=FBgn0034437.1.mrna1;Target=FBgn0034437.1 1152 1449 +
Chr2	stalkie_big_nohaplotig	CDS	64772523	64772703	.	+	0	Parent=FBgn0034437.1.mrna1;Target=FBgn0034437.1 1450 1630 +
Chr2	stalkie_big_nohaplotig	CDS	64772772	64772959	.	+	2	Parent=FBgn0034437.1.mrna1;Target=FBgn0034437.1 1631 1818 +
Chr2	stalkie_big_nohaplotig	CDS	64773016	64773159	.	+	0	Parent=FBgn0034437.1.mrna1;Target=FBgn0034437.1 1819 1962 +
Chr2	gffcl	locus	64774230	64783441	.	-	.	ID=RLOC_00018013;geneIDs=FBgn0034438.1.path1;transcripts=FBgn0034438.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64774230	64783441	.	-	.	ID=FBgn0034438.1.mrna1;geneID=FBgn0034438.1.path1;Name=FBgn0034438.1;Dir=sensecoverage=100.0;identity=99.9;matches=2625;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018013
Chr2	stalkie_big_nohaplotig	exon	64774230	64774394	99	-	.	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 2464 2628 +
Chr2	stalkie_big_nohaplotig	exon	64774468	64774750	99	-	.	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 2181 2463 +
Chr2	stalkie_big_nohaplotig	exon	64774812	64775020	100	-	.	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 1972 2180 +
Chr2	stalkie_big_nohaplotig	exon	64775102	64775245	100	-	.	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 1828 1971 +
Chr2	stalkie_big_nohaplotig	exon	64775563	64775747	100	-	.	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 1643 1827 +
Chr2	stalkie_big_nohaplotig	exon	64775828	64776008	100	-	.	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 1462 1642 +
Chr2	stalkie_big_nohaplotig	exon	64776063	64776247	100	-	.	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 1277 1461 +
Chr2	stalkie_big_nohaplotig	exon	64776300	64776498	100	-	.	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 1078 1276 +
Chr2	stalkie_big_nohaplotig	exon	64776620	64776774	99	-	.	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 923 1077 +
Chr2	stalkie_big_nohaplotig	exon	64776828	64776948	100	-	.	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 802 922 +
Chr2	stalkie_big_nohaplotig	exon	64777016	64777100	100	-	.	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 717 801 +
Chr2	stalkie_big_nohaplotig	exon	64777165	64777853	100	-	.	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 28 716 +
Chr2	stalkie_big_nohaplotig	exon	64783415	64783441	100	-	.	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 1 27 +
Chr2	stalkie_big_nohaplotig	CDS	64774230	64774394	.	-	0	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 2464 2628 +
Chr2	stalkie_big_nohaplotig	CDS	64774468	64774750	.	-	1	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 2181 2463 +
Chr2	stalkie_big_nohaplotig	CDS	64774812	64775020	.	-	0	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 1972 2180 +
Chr2	stalkie_big_nohaplotig	CDS	64775102	64775245	.	-	0	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 1828 1971 +
Chr2	stalkie_big_nohaplotig	CDS	64775563	64775747	.	-	2	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 1643 1827 +
Chr2	stalkie_big_nohaplotig	CDS	64775828	64776008	.	-	0	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 1462 1642 +
Chr2	stalkie_big_nohaplotig	CDS	64776063	64776247	.	-	2	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 1277 1461 +
Chr2	stalkie_big_nohaplotig	CDS	64776300	64776498	.	-	0	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 1078 1276 +
Chr2	stalkie_big_nohaplotig	CDS	64776620	64776774	.	-	2	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 923 1077 +
Chr2	stalkie_big_nohaplotig	CDS	64776828	64776948	.	-	0	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 802 922 +
Chr2	stalkie_big_nohaplotig	CDS	64777016	64777100	.	-	1	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 717 801 +
Chr2	stalkie_big_nohaplotig	CDS	64777165	64777853	.	-	0	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 28 716 +
Chr2	stalkie_big_nohaplotig	CDS	64783415	64783441	.	-	0	Parent=FBgn0034438.1.mrna1;Target=FBgn0034438.1 1 27 +
Chr2	gffcl	locus	64790008	64798844	.	+	.	ID=RLOC_00018014;geneIDs=FBgn0034439.1.path1;transcripts=FBgn0034439.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64790008	64798844	.	+	.	ID=FBgn0034439.1.mrna1;geneID=FBgn0034439.1.path1;Name=FBgn0034439.1;Dir=sensecoverage=100.0;identity=99.9;matches=2592;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018014
Chr2	stalkie_big_nohaplotig	exon	64790008	64790022	100	+	.	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 1 15 +
Chr2	stalkie_big_nohaplotig	exon	64794027	64794694	99	+	.	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 16 683 +
Chr2	stalkie_big_nohaplotig	exon	64796123	64796325	100	+	.	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 684 886 +
Chr2	stalkie_big_nohaplotig	exon	64796382	64796536	100	+	.	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 887 1041 +
Chr2	stalkie_big_nohaplotig	exon	64796652	64797035	99	+	.	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 1042 1425 +
Chr2	stalkie_big_nohaplotig	exon	64797088	64797268	100	+	.	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 1426 1606 +
Chr2	stalkie_big_nohaplotig	exon	64797326	64797510	100	+	.	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 1607 1791 +
Chr2	stalkie_big_nohaplotig	exon	64797568	64797711	100	+	.	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 1792 1935 +
Chr2	stalkie_big_nohaplotig	exon	64797770	64797869	100	+	.	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 1936 2035 +
Chr2	stalkie_big_nohaplotig	exon	64797971	64798073	100	+	.	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 2036 2138 +
Chr2	stalkie_big_nohaplotig	exon	64798288	64798579	100	+	.	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 2139 2430 +
Chr2	stalkie_big_nohaplotig	exon	64798680	64798844	100	+	.	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 2431 2595 +
Chr2	stalkie_big_nohaplotig	CDS	64790008	64790022	.	+	0	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 1 15 +
Chr2	stalkie_big_nohaplotig	CDS	64794027	64794694	.	+	0	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 16 683 +
Chr2	stalkie_big_nohaplotig	CDS	64796123	64796325	.	+	1	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 684 886 +
Chr2	stalkie_big_nohaplotig	CDS	64796382	64796536	.	+	2	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 887 1041 +
Chr2	stalkie_big_nohaplotig	CDS	64796652	64797035	.	+	0	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 1042 1425 +
Chr2	stalkie_big_nohaplotig	CDS	64797088	64797268	.	+	0	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 1426 1606 +
Chr2	stalkie_big_nohaplotig	CDS	64797326	64797510	.	+	2	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 1607 1791 +
Chr2	stalkie_big_nohaplotig	CDS	64797568	64797711	.	+	0	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 1792 1935 +
Chr2	stalkie_big_nohaplotig	CDS	64797770	64797869	.	+	0	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 1936 2035 +
Chr2	stalkie_big_nohaplotig	CDS	64797971	64798073	.	+	2	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 2036 2138 +
Chr2	stalkie_big_nohaplotig	CDS	64798288	64798579	.	+	1	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 2139 2430 +
Chr2	stalkie_big_nohaplotig	CDS	64798680	64798844	.	+	0	Parent=FBgn0034439.1.mrna1;Target=FBgn0034439.1 2431 2595 +
Chr2	gffcl	locus	64812019	64812376	.	+	.	ID=RLOC_00018015;geneIDs=comp141620_c0_seq1.path1;transcripts=comp141620_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64812019	64812376	.	+	.	ID=comp141620_c0_seq1.mrna1;geneID=comp141620_c0_seq1.path1;Name=comp141620_c0_seq1;Dir=indeterminatecoverage=54.1;identity=99.4;matches=356;mismatches=2;indels=0;unknowns=0;Target=comp141620_c0_seq1 360 3 .;CDS_Target=comp141620_c0_seq1 120 4 .;locus=RLOC_00018015
Chr2	stalkie_big_nohaplotig	exon	64812019	64812376	99	+	.	Parent=comp141620_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64812020	64812136	.	+	0	Parent=comp141620_c0_seq1.mrna1
Chr2	gffcl	locus	64814446	64817227	.	-	.	ID=RLOC_00018016;geneIDs=FBgn0033607.1.path1;transcripts=FBgn0033607.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64814446	64817227	.	-	.	ID=FBgn0033607.1.mrna1;geneID=FBgn0033607.1.path1;Name=FBgn0033607.1;Dir=sensecoverage=100.0;identity=100.0;matches=2055;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018016
Chr2	stalkie_big_nohaplotig	exon	64814446	64814559	100	-	.	Parent=FBgn0033607.1.mrna1;Target=FBgn0033607.1 1942 2055 +
Chr2	stalkie_big_nohaplotig	exon	64814627	64814812	100	-	.	Parent=FBgn0033607.1.mrna1;Target=FBgn0033607.1 1756 1941 +
Chr2	stalkie_big_nohaplotig	exon	64814872	64815067	100	-	.	Parent=FBgn0033607.1.mrna1;Target=FBgn0033607.1 1560 1755 +
Chr2	stalkie_big_nohaplotig	exon	64815128	64815267	100	-	.	Parent=FBgn0033607.1.mrna1;Target=FBgn0033607.1 1420 1559 +
Chr2	stalkie_big_nohaplotig	exon	64815421	64815525	100	-	.	Parent=FBgn0033607.1.mrna1;Target=FBgn0033607.1 1315 1419 +
Chr2	stalkie_big_nohaplotig	exon	64815597	64815802	100	-	.	Parent=FBgn0033607.1.mrna1;Target=FBgn0033607.1 1109 1314 +
Chr2	stalkie_big_nohaplotig	exon	64815866	64816447	100	-	.	Parent=FBgn0033607.1.mrna1;Target=FBgn0033607.1 527 1108 +
Chr2	stalkie_big_nohaplotig	exon	64816506	64816718	100	-	.	Parent=FBgn0033607.1.mrna1;Target=FBgn0033607.1 314 526 +
Chr2	stalkie_big_nohaplotig	exon	64816782	64817001	100	-	.	Parent=FBgn0033607.1.mrna1;Target=FBgn0033607.1 94 313 +
Chr2	stalkie_big_nohaplotig	exon	64817135	64817227	100	-	.	Parent=FBgn0033607.1.mrna1;Target=FBgn0033607.1 1 93 +
Chr2	stalkie_big_nohaplotig	CDS	64814446	64814559	.	-	0	Parent=FBgn0033607.1.mrna1;Target=FBgn0033607.1 1942 2055 +
Chr2	stalkie_big_nohaplotig	CDS	64814627	64814812	.	-	0	Parent=FBgn0033607.1.mrna1;Target=FBgn0033607.1 1756 1941 +
Chr2	stalkie_big_nohaplotig	CDS	64814872	64815067	.	-	1	Parent=FBgn0033607.1.mrna1;Target=FBgn0033607.1 1560 1755 +
Chr2	stalkie_big_nohaplotig	CDS	64815128	64815267	.	-	0	Parent=FBgn0033607.1.mrna1;Target=FBgn0033607.1 1420 1559 +
Chr2	stalkie_big_nohaplotig	CDS	64815421	64815525	.	-	0	Parent=FBgn0033607.1.mrna1;Target=FBgn0033607.1 1315 1419 +
Chr2	stalkie_big_nohaplotig	CDS	64815597	64815802	.	-	2	Parent=FBgn0033607.1.mrna1;Target=FBgn0033607.1 1109 1314 +
Chr2	stalkie_big_nohaplotig	CDS	64815866	64816447	.	-	2	Parent=FBgn0033607.1.mrna1;Target=FBgn0033607.1 527 1108 +
Chr2	stalkie_big_nohaplotig	CDS	64816506	64816718	.	-	2	Parent=FBgn0033607.1.mrna1;Target=FBgn0033607.1 314 526 +
Chr2	stalkie_big_nohaplotig	CDS	64816782	64817001	.	-	0	Parent=FBgn0033607.1.mrna1;Target=FBgn0033607.1 94 313 +
Chr2	stalkie_big_nohaplotig	CDS	64817135	64817227	.	-	0	Parent=FBgn0033607.1.mrna1;Target=FBgn0033607.1 1 93 +
Chr2	gffcl	locus	64819266	64819320	.	-	.	ID=RLOC_00018017;geneIDs=comp1039484_c0_seq1.path2;transcripts=comp1039484_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	64819266	64819320	.	-	.	ID=comp1039484_c0_seq1.mrna2;geneID=comp1039484_c0_seq1.path2;Name=comp1039484_c0_seq1;Dir=indeterminatecoverage=9.5;identity=100.0;matches=55;mismatches=0;indels=0;unknowns=0;Target=comp1039484_c0_seq1 578 524 .;locus=RLOC_00018017
Chr2	stalkie_big_nohaplotig	exon	64819266	64819320	100	-	.	Parent=comp1039484_c0_seq1.mrna2
Chr2	gffcl	locus	64819401	64820055	.	+	.	ID=RLOC_00018018;geneIDs=FBgn0033605.1.path1;transcripts=FBgn0033605.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64819401	64820055	.	+	.	ID=FBgn0033605.1.mrna1;geneID=FBgn0033605.1.path1;Name=FBgn0033605.1;Dir=sensecoverage=100.0;identity=100.0;matches=423;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018018
Chr2	stalkie_big_nohaplotig	exon	64819401	64819439	100	+	.	Parent=FBgn0033605.1.mrna1;Target=FBgn0033605.1 1 39 +
Chr2	stalkie_big_nohaplotig	exon	64819498	64819670	100	+	.	Parent=FBgn0033605.1.mrna1;Target=FBgn0033605.1 40 212 +
Chr2	stalkie_big_nohaplotig	exon	64819734	64819821	100	+	.	Parent=FBgn0033605.1.mrna1;Target=FBgn0033605.1 213 300 +
Chr2	stalkie_big_nohaplotig	exon	64819874	64819953	100	+	.	Parent=FBgn0033605.1.mrna1;Target=FBgn0033605.1 301 380 +
Chr2	stalkie_big_nohaplotig	exon	64820013	64820055	100	+	.	Parent=FBgn0033605.1.mrna1;Target=FBgn0033605.1 381 423 +
Chr2	stalkie_big_nohaplotig	CDS	64819401	64819439	.	+	0	Parent=FBgn0033605.1.mrna1;Target=FBgn0033605.1 1 39 +
Chr2	stalkie_big_nohaplotig	CDS	64819498	64819670	.	+	0	Parent=FBgn0033605.1.mrna1;Target=FBgn0033605.1 40 212 +
Chr2	stalkie_big_nohaplotig	CDS	64819734	64819821	.	+	1	Parent=FBgn0033605.1.mrna1;Target=FBgn0033605.1 213 300 +
Chr2	stalkie_big_nohaplotig	CDS	64819874	64819953	.	+	0	Parent=FBgn0033605.1.mrna1;Target=FBgn0033605.1 301 380 +
Chr2	stalkie_big_nohaplotig	CDS	64820013	64820055	.	+	1	Parent=FBgn0033605.1.mrna1;Target=FBgn0033605.1 381 423 +
Chr2	gffcl	locus	64825366	64828169	.	+	.	ID=RLOC_00018019;geneIDs=FBgn0034399.1.path2;transcripts=FBgn0034399.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	64825366	64828169	.	+	.	ID=FBgn0034399.1.mrna2;geneID=FBgn0034399.1.path2;Name=FBgn0034399.1;Dir=sensecoverage=100.0;identity=99.6;matches=457;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018019
Chr2	stalkie_big_nohaplotig	exon	64825366	64825492	100	+	.	Parent=FBgn0034399.1.mrna2;Target=FBgn0034399.1 1 127 +
Chr2	stalkie_big_nohaplotig	exon	64825831	64825910	97	+	.	Parent=FBgn0034399.1.mrna2;Target=FBgn0034399.1 128 207 +
Chr2	stalkie_big_nohaplotig	exon	64825963	64826125	100	+	.	Parent=FBgn0034399.1.mrna2;Target=FBgn0034399.1 208 370 +
Chr2	stalkie_big_nohaplotig	exon	64828081	64828169	100	+	.	Parent=FBgn0034399.1.mrna2;Target=FBgn0034399.1 371 459 +
Chr2	stalkie_big_nohaplotig	CDS	64825366	64825492	.	+	0	Parent=FBgn0034399.1.mrna2;Target=FBgn0034399.1 1 127 +
Chr2	stalkie_big_nohaplotig	CDS	64825831	64825910	.	+	2	Parent=FBgn0034399.1.mrna2;Target=FBgn0034399.1 128 207 +
Chr2	stalkie_big_nohaplotig	CDS	64825963	64826125	.	+	0	Parent=FBgn0034399.1.mrna2;Target=FBgn0034399.1 208 370 +
Chr2	stalkie_big_nohaplotig	CDS	64828081	64828169	.	+	2	Parent=FBgn0034399.1.mrna2;Target=FBgn0034399.1 371 459 +
Chr2	gffcl	locus	64837550	64838180	.	-	.	ID=RLOC_00018020;geneIDs=comp151631_c0_seq1.path1;transcripts=comp151631_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64837550	64838180	.	-	.	ID=comp151631_c0_seq1.mrna1;geneID=comp151631_c0_seq1.path1;Name=comp151631_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=631;mismatches=0;indels=0;unknowns=0;Target=comp151631_c0_seq1 631 1 .;CDS_Target=comp151631_c0_seq1 297 142 .;locus=RLOC_00018020
Chr2	stalkie_big_nohaplotig	exon	64837550	64838180	100	-	.	Parent=comp151631_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64837884	64838039	.	-	0	Parent=comp151631_c0_seq1.mrna1
Chr2	gffcl	locus	64840530	64858712	.	-	.	ID=RLOC_00018021;geneIDs=FBgn0034434.1.path1;transcripts=FBgn0034434.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64840530	64858712	.	-	.	ID=FBgn0034434.1.mrna1;geneID=FBgn0034434.1.path1;Name=FBgn0034434.1;Dir=sensecoverage=100.0;identity=100.0;matches=1536;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018021
Chr2	stalkie_big_nohaplotig	exon	64840530	64840644	100	-	.	Parent=FBgn0034434.1.mrna1;Target=FBgn0034434.1 1422 1536 +
Chr2	stalkie_big_nohaplotig	exon	64840706	64840867	100	-	.	Parent=FBgn0034434.1.mrna1;Target=FBgn0034434.1 1260 1421 +
Chr2	stalkie_big_nohaplotig	exon	64841096	64841231	100	-	.	Parent=FBgn0034434.1.mrna1;Target=FBgn0034434.1 1124 1259 +
Chr2	stalkie_big_nohaplotig	exon	64842790	64842982	100	-	.	Parent=FBgn0034434.1.mrna1;Target=FBgn0034434.1 931 1123 +
Chr2	stalkie_big_nohaplotig	exon	64844750	64844841	100	-	.	Parent=FBgn0034434.1.mrna1;Target=FBgn0034434.1 839 930 +
Chr2	stalkie_big_nohaplotig	exon	64849169	64849263	100	-	.	Parent=FBgn0034434.1.mrna1;Target=FBgn0034434.1 744 838 +
Chr2	stalkie_big_nohaplotig	exon	64849323	64849445	100	-	.	Parent=FBgn0034434.1.mrna1;Target=FBgn0034434.1 621 743 +
Chr2	stalkie_big_nohaplotig	exon	64849504	64849653	100	-	.	Parent=FBgn0034434.1.mrna1;Target=FBgn0034434.1 471 620 +
Chr2	stalkie_big_nohaplotig	exon	64849718	64849819	100	-	.	Parent=FBgn0034434.1.mrna1;Target=FBgn0034434.1 369 470 +
Chr2	stalkie_big_nohaplotig	exon	64852758	64853026	100	-	.	Parent=FBgn0034434.1.mrna1;Target=FBgn0034434.1 100 368 +
Chr2	stalkie_big_nohaplotig	exon	64858614	64858712	100	-	.	Parent=FBgn0034434.1.mrna1;Target=FBgn0034434.1 1 99 +
Chr2	stalkie_big_nohaplotig	CDS	64840530	64840644	.	-	1	Parent=FBgn0034434.1.mrna1;Target=FBgn0034434.1 1422 1536 +
Chr2	stalkie_big_nohaplotig	CDS	64840706	64840867	.	-	1	Parent=FBgn0034434.1.mrna1;Target=FBgn0034434.1 1260 1421 +
Chr2	stalkie_big_nohaplotig	CDS	64841096	64841231	.	-	2	Parent=FBgn0034434.1.mrna1;Target=FBgn0034434.1 1124 1259 +
Chr2	stalkie_big_nohaplotig	CDS	64842790	64842982	.	-	0	Parent=FBgn0034434.1.mrna1;Target=FBgn0034434.1 931 1123 +
Chr2	stalkie_big_nohaplotig	CDS	64844750	64844841	.	-	2	Parent=FBgn0034434.1.mrna1;Target=FBgn0034434.1 839 930 +
Chr2	stalkie_big_nohaplotig	CDS	64849169	64849263	.	-	1	Parent=FBgn0034434.1.mrna1;Target=FBgn0034434.1 744 838 +
Chr2	stalkie_big_nohaplotig	CDS	64849323	64849445	.	-	1	Parent=FBgn0034434.1.mrna1;Target=FBgn0034434.1 621 743 +
Chr2	stalkie_big_nohaplotig	CDS	64849504	64849653	.	-	1	Parent=FBgn0034434.1.mrna1;Target=FBgn0034434.1 471 620 +
Chr2	stalkie_big_nohaplotig	CDS	64849718	64849819	.	-	1	Parent=FBgn0034434.1.mrna1;Target=FBgn0034434.1 369 470 +
Chr2	stalkie_big_nohaplotig	CDS	64852758	64853026	.	-	0	Parent=FBgn0034434.1.mrna1;Target=FBgn0034434.1 100 368 +
Chr2	stalkie_big_nohaplotig	CDS	64858614	64858712	.	-	0	Parent=FBgn0034434.1.mrna1;Target=FBgn0034434.1 1 99 +
Chr2	gffcl	locus	64870196	64871516	.	+	.	ID=RLOC_00018022;geneIDs=comp139407_c0_seq1.path1;transcripts=comp139407_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64870196	64871516	.	+	.	ID=comp139407_c0_seq1.mrna1;geneID=comp139407_c0_seq1.path1;Name=comp139407_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=448;mismatches=0;indels=0;unknowns=0;Target=comp139407_c0_seq1 185 349 .;locus=RLOC_00018022
Chr2	stalkie_big_nohaplotig	exon	64870196	64870583	100	+	.	Parent=comp139407_c0_seq1.mrna1;Target=comp139407_c0_seq1 61 448 -
Chr2	stalkie_big_nohaplotig	exon	64871457	64871516	100	+	.	Parent=comp139407_c0_seq1.mrna1;Target=comp139407_c0_seq1 1 60 -
Chr2	stalkie_big_nohaplotig	CDS	64870295	64870459	.	+	0	Parent=comp139407_c0_seq1.mrna1
Chr2	gffcl	locus	64887296	64890414	.	-	.	ID=RLOC_00018023;geneIDs=FBgn0033918.1.path1;transcripts=FBgn0033918.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64887296	64890414	.	-	.	ID=FBgn0033918.1.mrna1;geneID=FBgn0033918.1.path1;Name=FBgn0033918.1;Dir=sensecoverage=100.0;identity=100.0;matches=1650;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018023
Chr2	stalkie_big_nohaplotig	exon	64887296	64887418	100	-	.	Parent=FBgn0033918.1.mrna1;Target=FBgn0033918.1 1528 1650 +
Chr2	stalkie_big_nohaplotig	exon	64887471	64887894	100	-	.	Parent=FBgn0033918.1.mrna1;Target=FBgn0033918.1 1104 1527 +
Chr2	stalkie_big_nohaplotig	exon	64887947	64888063	100	-	.	Parent=FBgn0033918.1.mrna1;Target=FBgn0033918.1 987 1103 +
Chr2	stalkie_big_nohaplotig	exon	64889307	64889604	100	-	.	Parent=FBgn0033918.1.mrna1;Target=FBgn0033918.1 689 986 +
Chr2	stalkie_big_nohaplotig	exon	64889659	64890235	100	-	.	Parent=FBgn0033918.1.mrna1;Target=FBgn0033918.1 112 688 +
Chr2	stalkie_big_nohaplotig	exon	64890304	64890414	100	-	.	Parent=FBgn0033918.1.mrna1;Target=FBgn0033918.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	64887296	64887418	.	-	0	Parent=FBgn0033918.1.mrna1;Target=FBgn0033918.1 1528 1650 +
Chr2	stalkie_big_nohaplotig	CDS	64887471	64887894	.	-	1	Parent=FBgn0033918.1.mrna1;Target=FBgn0033918.1 1104 1527 +
Chr2	stalkie_big_nohaplotig	CDS	64887947	64888063	.	-	1	Parent=FBgn0033918.1.mrna1;Target=FBgn0033918.1 987 1103 +
Chr2	stalkie_big_nohaplotig	CDS	64889307	64889604	.	-	2	Parent=FBgn0033918.1.mrna1;Target=FBgn0033918.1 689 986 +
Chr2	stalkie_big_nohaplotig	CDS	64889659	64890235	.	-	0	Parent=FBgn0033918.1.mrna1;Target=FBgn0033918.1 112 688 +
Chr2	stalkie_big_nohaplotig	CDS	64890304	64890414	.	-	0	Parent=FBgn0033918.1.mrna1;Target=FBgn0033918.1 1 111 +
Chr2	gffcl	locus	64895049	64898588	.	+	.	ID=RLOC_00018024;geneIDs=FBgn0001220.1.path1;transcripts=FBgn0001220.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64895049	64898588	.	+	.	ID=FBgn0001220.1.mrna1;geneID=FBgn0001220.1.path1;Name=FBgn0001220.1;Dir=sensecoverage=100.0;identity=100.0;matches=2075;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018024
Chr2	stalkie_big_nohaplotig	exon	64895049	64895171	99	+	.	Parent=FBgn0001220.1.mrna1;Target=FBgn0001220.1 1 123 +
Chr2	stalkie_big_nohaplotig	exon	64895273	64895319	100	+	.	Parent=FBgn0001220.1.mrna1;Target=FBgn0001220.1 124 170 +
Chr2	stalkie_big_nohaplotig	exon	64896192	64896770	100	+	.	Parent=FBgn0001220.1.mrna1;Target=FBgn0001220.1 171 749 +
Chr2	stalkie_big_nohaplotig	exon	64896843	64897947	100	+	.	Parent=FBgn0001220.1.mrna1;Target=FBgn0001220.1 750 1854 +
Chr2	stalkie_big_nohaplotig	exon	64898304	64898444	100	+	.	Parent=FBgn0001220.1.mrna1;Target=FBgn0001220.1 1855 1995 +
Chr2	stalkie_big_nohaplotig	exon	64898508	64898588	100	+	.	Parent=FBgn0001220.1.mrna1;Target=FBgn0001220.1 1996 2076 +
Chr2	stalkie_big_nohaplotig	CDS	64895049	64895171	.	+	0	Parent=FBgn0001220.1.mrna1;Target=FBgn0001220.1 1 123 +
Chr2	stalkie_big_nohaplotig	CDS	64895273	64895319	.	+	0	Parent=FBgn0001220.1.mrna1;Target=FBgn0001220.1 124 170 +
Chr2	stalkie_big_nohaplotig	CDS	64896192	64896770	.	+	1	Parent=FBgn0001220.1.mrna1;Target=FBgn0001220.1 171 749 +
Chr2	stalkie_big_nohaplotig	CDS	64896843	64897947	.	+	1	Parent=FBgn0001220.1.mrna1;Target=FBgn0001220.1 750 1854 +
Chr2	stalkie_big_nohaplotig	CDS	64898304	64898444	.	+	0	Parent=FBgn0001220.1.mrna1;Target=FBgn0001220.1 1855 1995 +
Chr2	stalkie_big_nohaplotig	CDS	64898508	64898588	.	+	0	Parent=FBgn0001220.1.mrna1;Target=FBgn0001220.1 1996 2076 +
Chr2	gffcl	locus	64902659	64914935	.	-	.	ID=RLOC_00018025;geneIDs=FBgn0010241.1.path1;transcripts=FBgn0010241.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64902659	64914935	.	-	.	ID=FBgn0010241.1.mrna1;geneID=FBgn0010241.1.path1;Name=FBgn0010241.1;Dir=sensecoverage=100.0;identity=100.0;matches=3891;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018025
Chr2	stalkie_big_nohaplotig	exon	64902659	64902856	100	-	.	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 3694 3891 +
Chr2	stalkie_big_nohaplotig	exon	64902914	64903060	100	-	.	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 3547 3693 +
Chr2	stalkie_big_nohaplotig	exon	64903131	64903692	100	-	.	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 2985 3546 +
Chr2	stalkie_big_nohaplotig	exon	64903751	64903890	100	-	.	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 2845 2984 +
Chr2	stalkie_big_nohaplotig	exon	64904175	64904276	100	-	.	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 2743 2844 +
Chr2	stalkie_big_nohaplotig	exon	64907525	64907728	100	-	.	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 2539 2742 +
Chr2	stalkie_big_nohaplotig	exon	64907802	64907963	100	-	.	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 2377 2538 +
Chr2	stalkie_big_nohaplotig	exon	64908034	64908297	100	-	.	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 2113 2376 +
Chr2	stalkie_big_nohaplotig	exon	64908686	64908958	100	-	.	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 1840 2112 +
Chr2	stalkie_big_nohaplotig	exon	64909015	64909185	100	-	.	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 1669 1839 +
Chr2	stalkie_big_nohaplotig	exon	64909242	64909796	100	-	.	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 1114 1668 +
Chr2	stalkie_big_nohaplotig	exon	64909854	64910174	100	-	.	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 793 1113 +
Chr2	stalkie_big_nohaplotig	exon	64910247	64910418	100	-	.	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 621 792 +
Chr2	stalkie_big_nohaplotig	exon	64910495	64910766	100	-	.	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 349 620 +
Chr2	stalkie_big_nohaplotig	exon	64914255	64914483	100	-	.	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 120 348 +
Chr2	stalkie_big_nohaplotig	exon	64914817	64914935	100	-	.	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 1 119 +
Chr2	stalkie_big_nohaplotig	CDS	64902659	64902856	.	-	0	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 3694 3891 +
Chr2	stalkie_big_nohaplotig	CDS	64902914	64903060	.	-	0	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 3547 3693 +
Chr2	stalkie_big_nohaplotig	CDS	64903131	64903692	.	-	1	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 2985 3546 +
Chr2	stalkie_big_nohaplotig	CDS	64903751	64903890	.	-	0	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 2845 2984 +
Chr2	stalkie_big_nohaplotig	CDS	64904175	64904276	.	-	0	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 2743 2844 +
Chr2	stalkie_big_nohaplotig	CDS	64907525	64907728	.	-	0	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 2539 2742 +
Chr2	stalkie_big_nohaplotig	CDS	64907802	64907963	.	-	0	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 2377 2538 +
Chr2	stalkie_big_nohaplotig	CDS	64908034	64908297	.	-	0	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 2113 2376 +
Chr2	stalkie_big_nohaplotig	CDS	64908686	64908958	.	-	0	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 1840 2112 +
Chr2	stalkie_big_nohaplotig	CDS	64909015	64909185	.	-	0	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 1669 1839 +
Chr2	stalkie_big_nohaplotig	CDS	64909242	64909796	.	-	0	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 1114 1668 +
Chr2	stalkie_big_nohaplotig	CDS	64909854	64910174	.	-	0	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 793 1113 +
Chr2	stalkie_big_nohaplotig	CDS	64910247	64910418	.	-	1	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 621 792 +
Chr2	stalkie_big_nohaplotig	CDS	64910495	64910766	.	-	0	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 349 620 +
Chr2	stalkie_big_nohaplotig	CDS	64914255	64914483	.	-	1	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 120 348 +
Chr2	stalkie_big_nohaplotig	CDS	64914817	64914935	.	-	0	Parent=FBgn0010241.1.mrna1;Target=FBgn0010241.1 1 119 +
Chr2	gffcl	locus	64915372	64921729	.	-	.	ID=RLOC_00018026;geneIDs=FBgn0033917.1.path1;transcripts=FBgn0033917.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64915372	64921729	.	-	.	ID=FBgn0033917.1.mrna1;geneID=FBgn0033917.1.path1;Name=FBgn0033917.1;Dir=sensecoverage=100.0;identity=99.7;matches=1182;mismatches=2;indels=1;unknowns=0;locus=RLOC_00018026
Chr2	stalkie_big_nohaplotig	exon	64915372	64915607	100	-	.	Parent=FBgn0033917.1.mrna1;Target=FBgn0033917.1 950 1185 +
Chr2	stalkie_big_nohaplotig	exon	64915667	64915851	100	-	.	Parent=FBgn0033917.1.mrna1;Target=FBgn0033917.1 765 949 +
Chr2	stalkie_big_nohaplotig	exon	64919046	64919153	100	-	.	Parent=FBgn0033917.1.mrna1;Target=FBgn0033917.1 657 764 +
Chr2	stalkie_big_nohaplotig	exon	64919216	64919644	99	-	.	Parent=FBgn0033917.1.mrna1;Target=FBgn0033917.1 228 656 +
Chr2	stalkie_big_nohaplotig	exon	64919723	64919913	100	-	.	Parent=FBgn0033917.1.mrna1;Target=FBgn0033917.1 37 227 +
Chr2	stalkie_big_nohaplotig	exon	64921695	64921729	97	-	.	Parent=FBgn0033917.1.mrna1;Target=FBgn0033917.1 1 36 +
Chr2	stalkie_big_nohaplotig	CDS	64919903	64919913	.	-	0	Parent=FBgn0033917.1.mrna1;Target=FBgn0033917.1 37 47 +
Chr2	stalkie_big_nohaplotig	CDS	64921695	64921727	.	-	0	Parent=FBgn0033917.1.mrna1;Target=FBgn0033917.1 3 36 +
Chr2	gffcl	locus	64917613	64918149	.	-	.	ID=RLOC_00018027;geneIDs=comp161460_c0_seq1.path2;transcripts=comp161460_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	64917613	64918149	.	-	.	ID=comp161460_c0_seq1.mrna2;geneID=comp161460_c0_seq1.path2;Name=comp161460_c0_seq1;Dir=indeterminatecoverage=67.4;identity=98.1;matches=528;mismatches=9;indels=1;unknowns=0;Target=comp161460_c0_seq1 798 261 .;CDS_Target=comp161460_c0_seq1 409 377 .;locus=RLOC_00018027
Chr2	stalkie_big_nohaplotig	exon	64917613	64918149	98	-	.	Parent=comp161460_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	64918002	64918033	.	-	0	Parent=comp161460_c0_seq1.mrna2
Chr2	gffcl	locus	64928324	64931498	.	-	.	ID=RLOC_00018028;geneIDs=FBgn0033916.1.path1;transcripts=FBgn0033916.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64928324	64931498	.	-	.	ID=FBgn0033916.1.mrna1;geneID=FBgn0033916.1.path1;Name=FBgn0033916.1;Dir=sensecoverage=100.0;identity=99.8;matches=2879;mismatches=1;indels=6;unknowns=0;locus=RLOC_00018028
Chr2	stalkie_big_nohaplotig	exon	64928324	64928559	100	-	.	Parent=FBgn0033916.1.mrna1;Target=FBgn0033916.1 2651 2886 +
Chr2	stalkie_big_nohaplotig	exon	64928622	64928895	97	-	.	Parent=FBgn0033916.1.mrna1;Target=FBgn0033916.1 2371 2650 +
Chr2	stalkie_big_nohaplotig	exon	64928955	64929981	100	-	.	Parent=FBgn0033916.1.mrna1;Target=FBgn0033916.1 1344 2370 +
Chr2	stalkie_big_nohaplotig	exon	64930041	64930779	100	-	.	Parent=FBgn0033916.1.mrna1;Target=FBgn0033916.1 605 1343 +
Chr2	stalkie_big_nohaplotig	exon	64930833	64931340	99	-	.	Parent=FBgn0033916.1.mrna1;Target=FBgn0033916.1 97 604 +
Chr2	stalkie_big_nohaplotig	exon	64931403	64931498	100	-	.	Parent=FBgn0033916.1.mrna1;Target=FBgn0033916.1 1 96 +
Chr2	stalkie_big_nohaplotig	CDS	64928324	64928559	.	-	2	Parent=FBgn0033916.1.mrna1;Target=FBgn0033916.1 2651 2886 +
Chr2	stalkie_big_nohaplotig	CDS	64928622	64928895	.	-	0	Parent=FBgn0033916.1.mrna1;Target=FBgn0033916.1 2371 2650 +
Chr2	stalkie_big_nohaplotig	CDS	64928955	64929981	.	-	1	Parent=FBgn0033916.1.mrna1;Target=FBgn0033916.1 1344 2370 +
Chr2	stalkie_big_nohaplotig	CDS	64930041	64930779	.	-	2	Parent=FBgn0033916.1.mrna1;Target=FBgn0033916.1 605 1343 +
Chr2	stalkie_big_nohaplotig	CDS	64930833	64931340	.	-	0	Parent=FBgn0033916.1.mrna1;Target=FBgn0033916.1 97 604 +
Chr2	stalkie_big_nohaplotig	CDS	64931403	64931498	.	-	0	Parent=FBgn0033916.1.mrna1;Target=FBgn0033916.1 1 96 +
Chr2	gffcl	locus	64943138	64948691	.	-	.	ID=RLOC_00018029;geneIDs=FBgn0033915.1.path1;transcripts=FBgn0033915.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64943138	64948691	.	-	.	ID=FBgn0033915.1.mrna1;geneID=FBgn0033915.1.path1;Name=FBgn0033915.1;Dir=sensecoverage=100.0;identity=100.0;matches=2441;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018029
Chr2	stalkie_big_nohaplotig	exon	64943138	64943647	100	-	.	Parent=FBgn0033915.1.mrna1;Target=FBgn0033915.1 1933 2442 +
Chr2	stalkie_big_nohaplotig	exon	64945904	64946572	100	-	.	Parent=FBgn0033915.1.mrna1;Target=FBgn0033915.1 1264 1932 +
Chr2	stalkie_big_nohaplotig	exon	64946641	64946764	100	-	.	Parent=FBgn0033915.1.mrna1;Target=FBgn0033915.1 1140 1263 +
Chr2	stalkie_big_nohaplotig	exon	64947076	64947213	100	-	.	Parent=FBgn0033915.1.mrna1;Target=FBgn0033915.1 1002 1139 +
Chr2	stalkie_big_nohaplotig	exon	64947273	64947624	100	-	.	Parent=FBgn0033915.1.mrna1;Target=FBgn0033915.1 650 1001 +
Chr2	stalkie_big_nohaplotig	exon	64947674	64947849	100	-	.	Parent=FBgn0033915.1.mrna1;Target=FBgn0033915.1 474 649 +
Chr2	stalkie_big_nohaplotig	exon	64948165	64948383	100	-	.	Parent=FBgn0033915.1.mrna1;Target=FBgn0033915.1 255 473 +
Chr2	stalkie_big_nohaplotig	exon	64948438	64948691	99	-	.	Parent=FBgn0033915.1.mrna1;Target=FBgn0033915.1 1 254 +
Chr2	stalkie_big_nohaplotig	CDS	64943138	64943647	.	-	0	Parent=FBgn0033915.1.mrna1;Target=FBgn0033915.1 1933 2442 +
Chr2	stalkie_big_nohaplotig	CDS	64945904	64946572	.	-	0	Parent=FBgn0033915.1.mrna1;Target=FBgn0033915.1 1264 1932 +
Chr2	stalkie_big_nohaplotig	CDS	64946641	64946764	.	-	1	Parent=FBgn0033915.1.mrna1;Target=FBgn0033915.1 1140 1263 +
Chr2	stalkie_big_nohaplotig	CDS	64947076	64947213	.	-	1	Parent=FBgn0033915.1.mrna1;Target=FBgn0033915.1 1002 1139 +
Chr2	stalkie_big_nohaplotig	CDS	64947273	64947624	.	-	2	Parent=FBgn0033915.1.mrna1;Target=FBgn0033915.1 650 1001 +
Chr2	stalkie_big_nohaplotig	CDS	64947674	64947849	.	-	1	Parent=FBgn0033915.1.mrna1;Target=FBgn0033915.1 474 649 +
Chr2	stalkie_big_nohaplotig	CDS	64948165	64948383	.	-	1	Parent=FBgn0033915.1.mrna1;Target=FBgn0033915.1 255 473 +
Chr2	stalkie_big_nohaplotig	CDS	64948438	64948691	.	-	0	Parent=FBgn0033915.1.mrna1;Target=FBgn0033915.1 1 254 +
Chr2	gffcl	locus	64943864	64944428	.	-	.	ID=RLOC_00018030;geneIDs=comp151948_c0_seq1.path1;transcripts=comp151948_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64943864	64944428	.	-	.	ID=comp151948_c0_seq1.mrna1;geneID=comp151948_c0_seq1.path1;Name=comp151948_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=565;mismatches=0;indels=0;unknowns=0;Target=comp151948_c0_seq1 565 1 .;CDS_Target=comp151948_c0_seq1 250 119 .;locus=RLOC_00018030
Chr2	stalkie_big_nohaplotig	exon	64943864	64944428	100	-	.	Parent=comp151948_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64944179	64944310	.	-	0	Parent=comp151948_c0_seq1.mrna1
Chr2	gffcl	locus	64976323	64981911	.	+	.	ID=RLOC_00018033;geneIDs=FBgn0261276.1.path1;transcripts=FBgn0261276.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64976323	64981911	.	+	.	ID=FBgn0261276.1.mrna1;geneID=FBgn0261276.1.path1;Name=FBgn0261276.1;Dir=sensecoverage=100.0;identity=100.0;matches=2886;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018033
Chr2	stalkie_big_nohaplotig	exon	64976323	64976363	100	+	.	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 1 41 +
Chr2	stalkie_big_nohaplotig	exon	64976416	64976674	100	+	.	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 42 300 +
Chr2	stalkie_big_nohaplotig	exon	64976727	64976862	100	+	.	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 301 436 +
Chr2	stalkie_big_nohaplotig	exon	64977842	64977958	100	+	.	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 437 553 +
Chr2	stalkie_big_nohaplotig	exon	64978076	64978150	100	+	.	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 554 628 +
Chr2	stalkie_big_nohaplotig	exon	64978207	64978796	100	+	.	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 629 1218 +
Chr2	stalkie_big_nohaplotig	exon	64978849	64979076	100	+	.	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 1219 1446 +
Chr2	stalkie_big_nohaplotig	exon	64979145	64979290	100	+	.	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 1447 1592 +
Chr2	stalkie_big_nohaplotig	exon	64979343	64979507	100	+	.	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 1593 1757 +
Chr2	stalkie_big_nohaplotig	exon	64979560	64979747	100	+	.	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 1758 1945 +
Chr2	stalkie_big_nohaplotig	exon	64980367	64980444	100	+	.	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 1946 2023 +
Chr2	stalkie_big_nohaplotig	exon	64980498	64980889	100	+	.	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 2024 2415 +
Chr2	stalkie_big_nohaplotig	exon	64980951	64981069	100	+	.	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 2416 2534 +
Chr2	stalkie_big_nohaplotig	exon	64981424	64981508	100	+	.	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 2535 2619 +
Chr2	stalkie_big_nohaplotig	exon	64981565	64981769	100	+	.	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 2620 2824 +
Chr2	stalkie_big_nohaplotig	exon	64981850	64981911	100	+	.	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 2825 2886 +
Chr2	stalkie_big_nohaplotig	CDS	64976323	64976363	.	+	0	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 1 41 +
Chr2	stalkie_big_nohaplotig	CDS	64976416	64976674	.	+	1	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 42 300 +
Chr2	stalkie_big_nohaplotig	CDS	64976727	64976862	.	+	0	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 301 436 +
Chr2	stalkie_big_nohaplotig	CDS	64977842	64977958	.	+	2	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 437 553 +
Chr2	stalkie_big_nohaplotig	CDS	64978076	64978150	.	+	2	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 554 628 +
Chr2	stalkie_big_nohaplotig	CDS	64978207	64978796	.	+	2	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 629 1218 +
Chr2	stalkie_big_nohaplotig	CDS	64978849	64979076	.	+	0	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 1219 1446 +
Chr2	stalkie_big_nohaplotig	CDS	64979145	64979290	.	+	0	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 1447 1592 +
Chr2	stalkie_big_nohaplotig	CDS	64979343	64979507	.	+	1	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 1593 1757 +
Chr2	stalkie_big_nohaplotig	CDS	64979560	64979747	.	+	1	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 1758 1945 +
Chr2	stalkie_big_nohaplotig	CDS	64980367	64980444	.	+	2	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 1946 2023 +
Chr2	stalkie_big_nohaplotig	CDS	64980498	64980889	.	+	2	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 2024 2415 +
Chr2	stalkie_big_nohaplotig	CDS	64980951	64981069	.	+	0	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 2416 2534 +
Chr2	stalkie_big_nohaplotig	CDS	64981424	64981508	.	+	1	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 2535 2619 +
Chr2	stalkie_big_nohaplotig	CDS	64981565	64981769	.	+	0	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 2620 2824 +
Chr2	stalkie_big_nohaplotig	CDS	64981850	64981911	.	+	2	Parent=FBgn0261276.1.mrna1;Target=FBgn0261276.1 2825 2886 +
Chr2	gffcl	locus	64982762	64991198	.	-	.	ID=RLOC_00018034;geneIDs=FBgn0033913.1.path1;transcripts=FBgn0033913.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64982762	64991198	.	-	.	ID=FBgn0033913.1.mrna1;geneID=FBgn0033913.1.path1;Name=FBgn0033913.1;Dir=sensecoverage=100.0;identity=99.8;matches=2002;mismatches=5;indels=0;unknowns=0;locus=RLOC_00018034
Chr2	stalkie_big_nohaplotig	exon	64982762	64982919	100	-	.	Parent=FBgn0033913.1.mrna1;Target=FBgn0033913.1 1850 2007 +
Chr2	stalkie_big_nohaplotig	exon	64989350	64991198	99	-	.	Parent=FBgn0033913.1.mrna1;Target=FBgn0033913.1 1 1849 +
Chr2	stalkie_big_nohaplotig	CDS	64982762	64982919	.	-	2	Parent=FBgn0033913.1.mrna1;Target=FBgn0033913.1 1850 2007 +
Chr2	stalkie_big_nohaplotig	CDS	64989350	64991198	.	-	0	Parent=FBgn0033913.1.mrna1;Target=FBgn0033913.1 1 1849 +
Chr2	gffcl	locus	64982986	64983096	.	+	.	ID=RLOC_00018035;geneIDs=comp163545_c0_seq1.path2;transcripts=comp163545_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	64982986	64983096	.	+	.	ID=comp163545_c0_seq1.mrna2;geneID=comp163545_c0_seq1.path2;Name=comp163545_c0_seq1;Dir=indeterminatecoverage=2.0;identity=95.5;matches=106;mismatches=5;indels=0;unknowns=0;Target=comp163545_c0_seq1 5447 5337 .;locus=RLOC_00018035
Chr2	stalkie_big_nohaplotig	exon	64982986	64983096	95	+	.	Parent=comp163545_c0_seq1.mrna2
Chr2	gffcl	locus	64984234	64985098	.	+	.	ID=RLOC_00018036;geneIDs=comp152987_c0_seq1.path1;transcripts=comp152987_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64984234	64985098	.	+	.	ID=comp152987_c0_seq1.mrna1;geneID=comp152987_c0_seq1.path1;Name=comp152987_c0_seq1;Dir=indeterminatecoverage=50.7;identity=97.3;matches=852;mismatches=13;indels=11;unknowns=0;Target=comp152987_c0_seq1 1727 852 .;CDS_Target=comp152987_c0_seq1 1610 1488 .;locus=RLOC_00018036
Chr2	stalkie_big_nohaplotig	exon	64984234	64985098	97	+	.	Parent=comp152987_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64984860	64984982	.	+	0	Parent=comp152987_c0_seq1.mrna1
Chr2	gffcl	locus	64986141	64987523	.	+	.	ID=RLOC_00018037;geneIDs=comp161346_c2_seq1.path1;transcripts=comp161346_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	64986141	64987523	.	+	.	ID=comp161346_c2_seq1.mrna1;geneID=comp161346_c2_seq1.path1;Name=comp161346_c2_seq1;Dir=indeterminatecoverage=100.0;identity=93.7;matches=1317;mismatches=65;indels=23;unknowns=0;Target=comp161346_c2_seq1 1404 1 .;CDS_Target=comp161346_c2_seq1 326 168 .;locus=RLOC_00018037
Chr2	stalkie_big_nohaplotig	exon	64986141	64987523	93	+	.	Parent=comp161346_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	64986303	64986461	.	+	0	Parent=comp161346_c2_seq1.mrna1
Chr2	gffcl	locus	65024245	65024864	.	+	.	ID=RLOC_00018038;geneIDs=FBgn0033912.1.path1;transcripts=FBgn0033912.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65024245	65024864	.	+	.	ID=FBgn0033912.1.mrna1;geneID=FBgn0033912.1.path1;Name=FBgn0033912.1;Dir=sensecoverage=98.6;identity=100.0;matches=426;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018038
Chr2	stalkie_big_nohaplotig	exon	65024245	65024405	100	+	.	Parent=FBgn0033912.1.mrna1;Target=FBgn0033912.1 7 167 +
Chr2	stalkie_big_nohaplotig	exon	65024600	65024864	100	+	.	Parent=FBgn0033912.1.mrna1;Target=FBgn0033912.1 168 432 +
Chr2	stalkie_big_nohaplotig	CDS	65024245	65024405	.	+	0	Parent=FBgn0033912.1.mrna1;Target=FBgn0033912.1 7 167 +
Chr2	stalkie_big_nohaplotig	CDS	65024600	65024864	.	+	1	Parent=FBgn0033912.1.mrna1;Target=FBgn0033912.1 168 432 +
Chr2	gffcl	locus	65026486	65026756	.	-	.	ID=RLOC_00018039;geneIDs=comp154391_c0_seq1.path1;transcripts=comp154391_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65026486	65026756	.	-	.	ID=comp154391_c0_seq1.mrna1;geneID=comp154391_c0_seq1.path1;Name=comp154391_c0_seq1;Dir=indeterminatecoverage=58.7;identity=93.5;matches=257;mismatches=10;indels=8;unknowns=0;Target=comp154391_c0_seq1 271 1 .;CDS_Target=comp154391_c0_seq1 114 88 .;locus=RLOC_00018039
Chr2	stalkie_big_nohaplotig	exon	65026486	65026756	93	-	.	Parent=comp154391_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65026643	65026669	.	-	0	Parent=comp154391_c0_seq1.mrna1
Chr2	gffcl	locus	65033824	65035083	.	-	.	ID=RLOC_00018040;geneIDs=FBgn0039711.2.path8;transcripts=FBgn0039711.2.mrna8
Chr2	stalkie_big_nohaplotig	mRNA	65033824	65035083	.	-	.	ID=FBgn0039711.2.mrna8;geneID=FBgn0039711.2.path8;Name=FBgn0039711.2;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1255;mismatches=5;indels=0;unknowns=0;Target=FBgn0039711.2 1260 1 .;locus=RLOC_00018040
Chr2	stalkie_big_nohaplotig	exon	65033824	65035083	99	-	.	Parent=FBgn0039711.2.mrna8
Chr2	stalkie_big_nohaplotig	CDS	65033824	65035083	.	-	0	Parent=FBgn0039711.2.mrna8
Chr2	gffcl	locus	65067494	65068606	.	+	.	ID=RLOC_00018041;geneIDs=Dp_FBgn0249247.8.path4;transcripts=Dp_FBgn0249247.8.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	65067494	65068606	.	+	.	ID=Dp_FBgn0249247.8.mrna4;geneID=Dp_FBgn0249247.8.path4;Name=Dp_FBgn0249247.8;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1108;mismatches=5;indels=0;unknowns=0;Target=Dp_FBgn0249247.8 1113 1 .;locus=RLOC_00018041
Chr2	stalkie_big_nohaplotig	exon	65067494	65068606	99	+	.	Parent=Dp_FBgn0249247.8.mrna4
Chr2	stalkie_big_nohaplotig	CDS	65067494	65068606	.	+	0	Parent=Dp_FBgn0249247.8.mrna4
Chr2	gffcl	locus	65085450	65085857	.	-	.	ID=RLOC_00018042;geneIDs=comp135845_c0_seq1.path1;transcripts=comp135845_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65085450	65085857	.	-	.	ID=comp135845_c0_seq1.mrna1;geneID=comp135845_c0_seq1.path1;Name=comp135845_c0_seq1;Dir=indeterminatecoverage=96.3;identity=92.5;matches=405;mismatches=3;indels=30;unknowns=0;Target=comp135845_c0_seq1 438 1 .;CDS_Target=comp135845_c0_seq1 156 40 .;locus=RLOC_00018042
Chr2	stalkie_big_nohaplotig	exon	65085450	65085857	92	-	.	Parent=comp135845_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65085732	65085818	.	-	0	Parent=comp135845_c0_seq1.mrna1
Chr2	gffcl	locus	65093273	65093640	.	+	.	ID=RLOC_00018043;geneIDs=Dv_FBgn0209645.1.path2;transcripts=Dv_FBgn0209645.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	65093273	65093640	.	+	.	ID=Dv_FBgn0209645.1.mrna2;geneID=Dv_FBgn0209645.1.path2;Name=Dv_FBgn0209645.1;Dir=indeterminatecoverage=99.7;identity=98.9;matches=364;mismatches=4;indels=0;unknowns=0;Target=Dv_FBgn0209645.1 368 1 .;CDS_Target=Dv_FBgn0209645.1 366 1 .;locus=RLOC_00018043
Chr2	stalkie_big_nohaplotig	exon	65093273	65093640	98	+	.	Parent=Dv_FBgn0209645.1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	65093273	65093638	.	+	0	Parent=Dv_FBgn0209645.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	65133773	65135068	.	+	.	ID=comp159036_c0_seq1.mrna1;geneID=comp159036_c0_seq1.path1;Name=comp159036_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1295;mismatches=1;indels=0;unknowns=0;Target=comp159036_c0_seq1 1296 1 .;CDS_Target=comp159036_c0_seq1 158 48 .;locus=RLOC_00018044
Chr2	stalkie_big_nohaplotig	exon	65133773	65135068	99	+	.	Parent=comp159036_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65133820	65133930	.	+	0	Parent=comp159036_c0_seq1.mrna1
Chr2	gffcl	locus	65105246	65105554	.	+	.	ID=RLOC_00018045;geneIDs=comp151143_c4_seq1.path2;transcripts=comp151143_c4_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	65105246	65105554	.	+	.	ID=comp151143_c4_seq1.mrna2;geneID=comp151143_c4_seq1.path2;Name=comp151143_c4_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=302;mismatches=7;indels=0;unknowns=0;Target=comp151143_c4_seq1 309 1 .;CDS_Target=comp151143_c4_seq1 232 83 .;locus=RLOC_00018045
Chr2	stalkie_big_nohaplotig	exon	65105246	65105554	97	+	.	Parent=comp151143_c4_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	65105328	65105477	.	+	0	Parent=comp151143_c4_seq1.mrna2
Chr2	gffcl	locus	65123222	65129494	.	+	.	ID=RLOC_00018046;geneIDs=FBgn0033919.1.path1;transcripts=FBgn0033919.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65123222	65129494	.	+	.	ID=FBgn0033919.1.mrna1;geneID=FBgn0033919.1.path1;Name=FBgn0033919.1;Dir=sensecoverage=100.0;identity=100.0;matches=1623;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018046
Chr2	stalkie_big_nohaplotig	exon	65123222	65123296	100	+	.	Parent=FBgn0033919.1.mrna1;Target=FBgn0033919.1 1 75 +
Chr2	stalkie_big_nohaplotig	exon	65123347	65123506	100	+	.	Parent=FBgn0033919.1.mrna1;Target=FBgn0033919.1 76 235 +
Chr2	stalkie_big_nohaplotig	exon	65126388	65126421	100	+	.	Parent=FBgn0033919.1.mrna1;Target=FBgn0033919.1 236 269 +
Chr2	stalkie_big_nohaplotig	exon	65127876	65128051	100	+	.	Parent=FBgn0033919.1.mrna1;Target=FBgn0033919.1 270 445 +
Chr2	stalkie_big_nohaplotig	exon	65128155	65129020	100	+	.	Parent=FBgn0033919.1.mrna1;Target=FBgn0033919.1 446 1311 +
Chr2	stalkie_big_nohaplotig	exon	65129084	65129263	100	+	.	Parent=FBgn0033919.1.mrna1;Target=FBgn0033919.1 1312 1491 +
Chr2	stalkie_big_nohaplotig	exon	65129363	65129494	100	+	.	Parent=FBgn0033919.1.mrna1;Target=FBgn0033919.1 1492 1623 +
Chr2	stalkie_big_nohaplotig	CDS	65123222	65123296	.	+	0	Parent=FBgn0033919.1.mrna1;Target=FBgn0033919.1 1 75 +
Chr2	stalkie_big_nohaplotig	CDS	65123347	65123506	.	+	0	Parent=FBgn0033919.1.mrna1;Target=FBgn0033919.1 76 235 +
Chr2	stalkie_big_nohaplotig	CDS	65126388	65126421	.	+	2	Parent=FBgn0033919.1.mrna1;Target=FBgn0033919.1 236 269 +
Chr2	stalkie_big_nohaplotig	CDS	65127876	65128051	.	+	1	Parent=FBgn0033919.1.mrna1;Target=FBgn0033919.1 270 445 +
Chr2	stalkie_big_nohaplotig	CDS	65128155	65129020	.	+	2	Parent=FBgn0033919.1.mrna1;Target=FBgn0033919.1 446 1311 +
Chr2	stalkie_big_nohaplotig	CDS	65129084	65129263	.	+	0	Parent=FBgn0033919.1.mrna1;Target=FBgn0033919.1 1312 1491 +
Chr2	stalkie_big_nohaplotig	CDS	65129363	65129494	.	+	0	Parent=FBgn0033919.1.mrna1;Target=FBgn0033919.1 1492 1623 +
Chr2	gffcl	locus	65136556	65137761	.	-	.	ID=RLOC_00018047;geneIDs=FBgn0261270.1.path1;transcripts=FBgn0261270.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65136556	65137761	.	-	.	ID=FBgn0261270.1.mrna1;geneID=FBgn0261270.1.path1;Name=FBgn0261270.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1206;mismatches=0;indels=0;unknowns=0;Target=FBgn0261270.1 1206 1 .;locus=RLOC_00018047
Chr2	stalkie_big_nohaplotig	exon	65136556	65137761	100	-	.	Parent=FBgn0261270.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65136556	65137761	.	-	0	Parent=FBgn0261270.1.mrna1
Chr2	gffcl	locus	65142885	65153156	.	+	.	ID=RLOC_00018048;geneIDs=FBgn0261269.1.path1;transcripts=FBgn0261269.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65142885	65153156	.	+	.	ID=FBgn0261269.1.mrna1;geneID=FBgn0261269.1.path1;Name=FBgn0261269.1;Dir=sensecoverage=99.6;identity=99.6;matches=3268;mismatches=12;indels=0;unknowns=0;locus=RLOC_00018048
Chr2	stalkie_big_nohaplotig	exon	65142885	65143021	100	+	.	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 1 137 +
Chr2	stalkie_big_nohaplotig	exon	65143337	65143497	100	+	.	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 138 298 +
Chr2	stalkie_big_nohaplotig	exon	65143555	65143724	100	+	.	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 299 468 +
Chr2	stalkie_big_nohaplotig	exon	65143778	65143930	100	+	.	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 469 621 +
Chr2	stalkie_big_nohaplotig	exon	65144007	65144209	100	+	.	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 622 824 +
Chr2	stalkie_big_nohaplotig	exon	65144276	65144377	99	+	.	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 825 926 +
Chr2	stalkie_big_nohaplotig	exon	65144450	65144594	100	+	.	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 927 1071 +
Chr2	stalkie_big_nohaplotig	exon	65145571	65145825	100	+	.	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 1072 1326 +
Chr2	stalkie_big_nohaplotig	exon	65145889	65146500	99	+	.	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 1327 1938 +
Chr2	stalkie_big_nohaplotig	exon	65146562	65146656	98	+	.	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 1939 2033 +
Chr2	stalkie_big_nohaplotig	exon	65148787	65148976	100	+	.	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 2034 2223 +
Chr2	stalkie_big_nohaplotig	exon	65149032	65149227	100	+	.	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 2224 2419 +
Chr2	stalkie_big_nohaplotig	exon	65149323	65149824	99	+	.	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 2420 2921 +
Chr2	stalkie_big_nohaplotig	exon	65152798	65153156	99	+	.	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 2922 3280 +
Chr2	stalkie_big_nohaplotig	CDS	65142885	65143021	.	+	0	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 1 137 +
Chr2	stalkie_big_nohaplotig	CDS	65143337	65143497	.	+	1	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 138 298 +
Chr2	stalkie_big_nohaplotig	CDS	65143555	65143724	.	+	2	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 299 468 +
Chr2	stalkie_big_nohaplotig	CDS	65143778	65143930	.	+	0	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 469 621 +
Chr2	stalkie_big_nohaplotig	CDS	65144007	65144209	.	+	0	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 622 824 +
Chr2	stalkie_big_nohaplotig	CDS	65144276	65144377	.	+	1	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 825 926 +
Chr2	stalkie_big_nohaplotig	CDS	65144450	65144594	.	+	1	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 927 1071 +
Chr2	stalkie_big_nohaplotig	CDS	65145571	65145825	.	+	0	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 1072 1326 +
Chr2	stalkie_big_nohaplotig	CDS	65145889	65146500	.	+	0	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 1327 1938 +
Chr2	stalkie_big_nohaplotig	CDS	65146562	65146656	.	+	0	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 1939 2033 +
Chr2	stalkie_big_nohaplotig	CDS	65148787	65148976	.	+	1	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 2034 2223 +
Chr2	stalkie_big_nohaplotig	CDS	65149032	65149227	.	+	0	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 2224 2419 +
Chr2	stalkie_big_nohaplotig	CDS	65149323	65149824	.	+	2	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 2420 2921 +
Chr2	stalkie_big_nohaplotig	CDS	65152798	65153155	.	+	1	Parent=FBgn0261269.1.mrna1;Target=FBgn0261269.1 2922 3279 +
Chr2	gffcl	locus	65151560	65152566	.	+	.	ID=RLOC_00018049;geneIDs=comp152970_c1_seq1.path1;transcripts=comp152970_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65151560	65152566	.	+	.	ID=comp152970_c1_seq1.mrna1;geneID=comp152970_c1_seq1.path1;Name=comp152970_c1_seq1;Dir=indeterminatecoverage=99.6;identity=94.5;matches=981;mismatches=16;indels=41;unknowns=0;Target=comp152970_c1_seq1 936 862 .;locus=RLOC_00018049
Chr2	stalkie_big_nohaplotig	exon	65151560	65152459	93	+	.	Parent=comp152970_c1_seq1.mrna1;Target=comp152970_c1_seq1 936 6 .
Chr2	stalkie_big_nohaplotig	exon	65152465	65152566	100	+	.	Parent=comp152970_c1_seq1.mrna1;Target=comp152970_c1_seq1 1147 1046 .
Chr2	stalkie_big_nohaplotig	CDS	65152385	65152459	.	+	0	Parent=comp152970_c1_seq1.mrna1
Chr2	gffcl	locus	65208785	65255211	.	+	.	ID=RLOC_00018050;geneIDs=FBgn0263397.1.path1;transcripts=FBgn0263397.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65208785	65255211	.	+	.	ID=FBgn0263397.1.mrna1;geneID=FBgn0263397.1.path1;Name=FBgn0263397.1;Dir=sensecoverage=100.0;identity=99.9;matches=3307;mismatches=1;indels=1;unknowns=0;locus=RLOC_00018050
Chr2	stalkie_big_nohaplotig	exon	65208785	65210568	99	+	.	Parent=FBgn0263397.1.mrna1;Target=FBgn0263397.1 1 1784 +
Chr2	stalkie_big_nohaplotig	exon	65226098	65226257	100	+	.	Parent=FBgn0263397.1.mrna1;Target=FBgn0263397.1 1785 1944 +
Chr2	stalkie_big_nohaplotig	exon	65226420	65226658	100	+	.	Parent=FBgn0263397.1.mrna1;Target=FBgn0263397.1 1945 2183 +
Chr2	stalkie_big_nohaplotig	exon	65226723	65226886	100	+	.	Parent=FBgn0263397.1.mrna1;Target=FBgn0263397.1 2184 2347 +
Chr2	stalkie_big_nohaplotig	exon	65228676	65228812	100	+	.	Parent=FBgn0263397.1.mrna1;Target=FBgn0263397.1 2348 2484 +
Chr2	stalkie_big_nohaplotig	exon	65228854	65229006	100	+	.	Parent=FBgn0263397.1.mrna1;Target=FBgn0263397.1 2485 2637 +
Chr2	stalkie_big_nohaplotig	exon	65243417	65243512	100	+	.	Parent=FBgn0263397.1.mrna1;Target=FBgn0263397.1 2638 2733 +
Chr2	stalkie_big_nohaplotig	exon	65248446	65248595	100	+	.	Parent=FBgn0263397.1.mrna1;Target=FBgn0263397.1 2734 2883 +
Chr2	stalkie_big_nohaplotig	exon	65254629	65254705	100	+	.	Parent=FBgn0263397.1.mrna1;Target=FBgn0263397.1 2884 2960 +
Chr2	stalkie_big_nohaplotig	exon	65254769	65255080	100	+	.	Parent=FBgn0263397.1.mrna1;Target=FBgn0263397.1 2961 3272 +
Chr2	stalkie_big_nohaplotig	exon	65255176	65255211	97	+	.	Parent=FBgn0263397.1.mrna1;Target=FBgn0263397.1 3273 3309 +
Chr2	stalkie_big_nohaplotig	CDS	65208785	65210568	.	+	0	Parent=FBgn0263397.1.mrna1;Target=FBgn0263397.1 1 1784 +
Chr2	stalkie_big_nohaplotig	CDS	65226098	65226257	.	+	1	Parent=FBgn0263397.1.mrna1;Target=FBgn0263397.1 1785 1944 +
Chr2	stalkie_big_nohaplotig	CDS	65226420	65226658	.	+	0	Parent=FBgn0263397.1.mrna1;Target=FBgn0263397.1 1945 2183 +
Chr2	stalkie_big_nohaplotig	CDS	65226723	65226886	.	+	1	Parent=FBgn0263397.1.mrna1;Target=FBgn0263397.1 2184 2347 +
Chr2	stalkie_big_nohaplotig	CDS	65228676	65228812	.	+	2	Parent=FBgn0263397.1.mrna1;Target=FBgn0263397.1 2348 2484 +
Chr2	stalkie_big_nohaplotig	CDS	65228854	65229006	.	+	0	Parent=FBgn0263397.1.mrna1;Target=FBgn0263397.1 2485 2637 +
Chr2	stalkie_big_nohaplotig	CDS	65243417	65243512	.	+	0	Parent=FBgn0263397.1.mrna1;Target=FBgn0263397.1 2638 2733 +
Chr2	stalkie_big_nohaplotig	CDS	65248446	65248595	.	+	0	Parent=FBgn0263397.1.mrna1;Target=FBgn0263397.1 2734 2883 +
Chr2	stalkie_big_nohaplotig	CDS	65254629	65254705	.	+	0	Parent=FBgn0263397.1.mrna1;Target=FBgn0263397.1 2884 2960 +
Chr2	stalkie_big_nohaplotig	CDS	65254769	65255080	.	+	1	Parent=FBgn0263397.1.mrna1;Target=FBgn0263397.1 2961 3272 +
Chr2	stalkie_big_nohaplotig	CDS	65255176	65255211	.	+	1	Parent=FBgn0263397.1.mrna1;Target=FBgn0263397.1 3273 3309 +
Chr2	gffcl	locus	65245409	65246627	.	-	.	ID=RLOC_00018051;geneIDs=comp153006_c0_seq1.path1;transcripts=comp153006_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65245409	65246627	.	-	.	ID=comp153006_c0_seq1.mrna1;geneID=comp153006_c0_seq1.path1;Name=comp153006_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1218;mismatches=1;indels=0;unknowns=0;Target=comp153006_c0_seq1 1219 1 .;CDS_Target=comp153006_c0_seq1 943 821 .;locus=RLOC_00018051
Chr2	stalkie_big_nohaplotig	exon	65245409	65246627	99	-	.	Parent=comp153006_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65245685	65245807	.	-	0	Parent=comp153006_c0_seq1.mrna1
Chr2	gffcl	locus	65255394	65256278	.	-	.	ID=RLOC_00018052;geneIDs=comp146098_c0_seq1.path1;transcripts=comp146098_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65255394	65256278	.	-	.	ID=comp146098_c0_seq1.mrna1;geneID=comp146098_c0_seq1.path1;Name=comp146098_c0_seq1;Dir=indeterminatecoverage=97.8;identity=99.3;matches=879;mismatches=6;indels=0;unknowns=0;Target=comp146098_c0_seq1 905 21 .;CDS_Target=comp146098_c0_seq1 905 756 .;locus=RLOC_00018052
Chr2	stalkie_big_nohaplotig	exon	65255394	65256278	99	-	.	Parent=comp146098_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65255394	65255543	.	-	0	Parent=comp146098_c0_seq1.mrna1
Chr2	gffcl	locus	65265301	65266217	.	-	.	ID=RLOC_00018053;geneIDs=comp152140_c0_seq1.path1;transcripts=comp152140_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65265301	65266217	.	-	.	ID=comp152140_c0_seq1.mrna1;geneID=comp152140_c0_seq1.path1;Name=comp152140_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=909;mismatches=2;indels=6;unknowns=0;Target=comp152140_c0_seq1 911 1 .;CDS_Target=comp152140_c0_seq1 471 370 .;locus=RLOC_00018053
Chr2	stalkie_big_nohaplotig	exon	65265301	65266217	99	-	.	Parent=comp152140_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65265741	65265842	.	-	0	Parent=comp152140_c0_seq1.mrna1
Chr2	gffcl	locus	65316766	65317612	.	+	.	ID=RLOC_00018054;geneIDs=FBgn0010078.2.path1;transcripts=FBgn0010078.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65316766	65317612	.	+	.	ID=FBgn0010078.2.mrna1;geneID=FBgn0010078.2.path1;Name=FBgn0010078.2;Dir=sensecoverage=100.0;identity=99.8;matches=482;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018054
Chr2	stalkie_big_nohaplotig	exon	65316766	65316841	100	+	.	Parent=FBgn0010078.2.mrna1;Target=FBgn0010078.2 1 76 +
Chr2	stalkie_big_nohaplotig	exon	65316964	65317047	100	+	.	Parent=FBgn0010078.2.mrna1;Target=FBgn0010078.2 77 160 +
Chr2	stalkie_big_nohaplotig	exon	65317101	65317228	99	+	.	Parent=FBgn0010078.2.mrna1;Target=FBgn0010078.2 161 288 +
Chr2	stalkie_big_nohaplotig	exon	65317418	65317612	100	+	.	Parent=FBgn0010078.2.mrna1;Target=FBgn0010078.2 289 483 +
Chr2	stalkie_big_nohaplotig	CDS	65316766	65316841	.	+	0	Parent=FBgn0010078.2.mrna1;Target=FBgn0010078.2 1 76 +
Chr2	stalkie_big_nohaplotig	CDS	65316964	65317047	.	+	2	Parent=FBgn0010078.2.mrna1;Target=FBgn0010078.2 77 160 +
Chr2	stalkie_big_nohaplotig	CDS	65317101	65317228	.	+	2	Parent=FBgn0010078.2.mrna1;Target=FBgn0010078.2 161 288 +
Chr2	stalkie_big_nohaplotig	CDS	65317418	65317612	.	+	0	Parent=FBgn0010078.2.mrna1;Target=FBgn0010078.2 289 483 +
Chr2	gffcl	locus	65317620	65318045	.	-	.	ID=RLOC_00018055;geneIDs=comp135924_c0_seq1.path1;transcripts=comp135924_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65317620	65318045	.	-	.	ID=comp135924_c0_seq1.mrna1;geneID=comp135924_c0_seq1.path1;Name=comp135924_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=425;mismatches=1;indels=0;unknowns=0;Target=comp135924_c0_seq1 426 1 .;CDS_Target=comp135924_c0_seq1 96 1 .;locus=RLOC_00018055
Chr2	stalkie_big_nohaplotig	exon	65317620	65318045	99	-	.	Parent=comp135924_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65317950	65318045	.	-	0	Parent=comp135924_c0_seq1.mrna1
Chr2	gffcl	locus	65318171	65318980	.	-	.	ID=RLOC_00018056;geneIDs=FBgn0261881.1.path1;transcripts=FBgn0261881.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65318171	65318980	.	-	.	ID=FBgn0261881.1.mrna1;geneID=FBgn0261881.1.path1;Name=FBgn0261881.1;Dir=sensecoverage=100.0;identity=100.0;matches=705;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018056
Chr2	stalkie_big_nohaplotig	exon	65318171	65318552	100	-	.	Parent=FBgn0261881.1.mrna1;Target=FBgn0261881.1 324 705 +
Chr2	stalkie_big_nohaplotig	exon	65318601	65318727	100	-	.	Parent=FBgn0261881.1.mrna1;Target=FBgn0261881.1 197 323 +
Chr2	stalkie_big_nohaplotig	exon	65318785	65318980	100	-	.	Parent=FBgn0261881.1.mrna1;Target=FBgn0261881.1 1 196 +
Chr2	stalkie_big_nohaplotig	CDS	65318171	65318552	.	-	1	Parent=FBgn0261881.1.mrna1;Target=FBgn0261881.1 324 705 +
Chr2	stalkie_big_nohaplotig	CDS	65318601	65318727	.	-	2	Parent=FBgn0261881.1.mrna1;Target=FBgn0261881.1 197 323 +
Chr2	stalkie_big_nohaplotig	CDS	65318785	65318980	.	-	0	Parent=FBgn0261881.1.mrna1;Target=FBgn0261881.1 1 196 +
Chr2	gffcl	locus	65331800	65350708	.	-	.	ID=RLOC_00018057;geneIDs=FBgn0001263.1.path1;transcripts=FBgn0001263.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65331800	65350708	.	-	.	ID=FBgn0001263.1.mrna1;geneID=FBgn0001263.1.path1;Name=FBgn0001263.1;Dir=sensecoverage=100.0;identity=99.7;matches=1969;mismatches=5;indels=0;unknowns=0;locus=RLOC_00018057
Chr2	stalkie_big_nohaplotig	exon	65331800	65331988	100	-	.	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 1786 1974 +
Chr2	stalkie_big_nohaplotig	exon	65332049	65332345	100	-	.	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 1489 1785 +
Chr2	stalkie_big_nohaplotig	exon	65332398	65332540	100	-	.	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 1346 1488 +
Chr2	stalkie_big_nohaplotig	exon	65332608	65332719	100	-	.	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 1234 1345 +
Chr2	stalkie_big_nohaplotig	exon	65332781	65332852	100	-	.	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 1162 1233 +
Chr2	stalkie_big_nohaplotig	exon	65335045	65335197	100	-	.	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 1009 1161 +
Chr2	stalkie_big_nohaplotig	exon	65335248	65335603	100	-	.	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 653 1008 +
Chr2	stalkie_big_nohaplotig	exon	65335665	65335755	100	-	.	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 562 652 +
Chr2	stalkie_big_nohaplotig	exon	65335849	65336018	98	-	.	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 392 561 +
Chr2	stalkie_big_nohaplotig	exon	65336083	65336149	100	-	.	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 325 391 +
Chr2	stalkie_big_nohaplotig	exon	65339083	65339205	99	-	.	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 202 324 +
Chr2	stalkie_big_nohaplotig	exon	65339419	65339508	97	-	.	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 112 201 +
Chr2	stalkie_big_nohaplotig	exon	65347309	65347379	100	-	.	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 41 111 +
Chr2	stalkie_big_nohaplotig	exon	65350669	65350708	100	-	.	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 1 40 +
Chr2	stalkie_big_nohaplotig	CDS	65331800	65331988	.	-	0	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 1786 1974 +
Chr2	stalkie_big_nohaplotig	CDS	65332049	65332345	.	-	0	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 1489 1785 +
Chr2	stalkie_big_nohaplotig	CDS	65332398	65332540	.	-	2	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 1346 1488 +
Chr2	stalkie_big_nohaplotig	CDS	65332608	65332719	.	-	0	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 1234 1345 +
Chr2	stalkie_big_nohaplotig	CDS	65332781	65332852	.	-	0	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 1162 1233 +
Chr2	stalkie_big_nohaplotig	CDS	65335045	65335197	.	-	0	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 1009 1161 +
Chr2	stalkie_big_nohaplotig	CDS	65335248	65335603	.	-	2	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 653 1008 +
Chr2	stalkie_big_nohaplotig	CDS	65335665	65335755	.	-	0	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 562 652 +
Chr2	stalkie_big_nohaplotig	CDS	65335849	65336018	.	-	2	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 392 561 +
Chr2	stalkie_big_nohaplotig	CDS	65336083	65336149	.	-	0	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 325 391 +
Chr2	stalkie_big_nohaplotig	CDS	65339083	65339205	.	-	0	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 202 324 +
Chr2	stalkie_big_nohaplotig	CDS	65339419	65339508	.	-	0	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 112 201 +
Chr2	stalkie_big_nohaplotig	CDS	65347309	65347379	.	-	2	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 41 111 +
Chr2	stalkie_big_nohaplotig	CDS	65350669	65350708	.	-	0	Parent=FBgn0001263.1.mrna1;Target=FBgn0001263.1 1 40 +
Chr2	gffcl	locus	65332922	65333433	.	-	.	ID=RLOC_00018058;geneIDs=comp136831_c0_seq1.path1;transcripts=comp136831_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65332922	65333433	.	-	.	ID=comp136831_c0_seq1.mrna1;geneID=comp136831_c0_seq1.path1;Name=comp136831_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=504;mismatches=4;indels=4;unknowns=0;Target=comp136831_c0_seq1 508 1 .;CDS_Target=comp136831_c0_seq1 185 3 .;locus=RLOC_00018058
Chr2	stalkie_big_nohaplotig	exon	65332922	65333433	98	-	.	Parent=comp136831_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65333249	65333431	.	-	0	Parent=comp136831_c0_seq1.mrna1
Chr2	gffcl	locus	65346346	65346793	.	+	.	ID=RLOC_00018059;geneIDs=Dv_FBgn0209645.2.path2;transcripts=Dv_FBgn0209645.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	65346346	65346793	.	+	.	ID=Dv_FBgn0209645.2.mrna2;geneID=Dv_FBgn0209645.2.path2;Name=Dv_FBgn0209645.2;Dir=indeterminatecoverage=99.8;identity=98.0;matches=440;mismatches=8;indels=1;unknowns=0;Target=Dv_FBgn0209645.2 450 2 .;CDS_Target=Dv_FBgn0209645.2 47 3 .;locus=RLOC_00018059
Chr2	stalkie_big_nohaplotig	exon	65346346	65346793	97	+	.	Parent=Dv_FBgn0209645.2.mrna2
Chr2	stalkie_big_nohaplotig	CDS	65346347	65346390	.	+	0	Parent=Dv_FBgn0209645.2.mrna2
Chr2	gffcl	locus	65352415	65353633	.	-	.	ID=RLOC_00018060;geneIDs=Dv_FBgn0209645.2.path3,comp163741_c0_seq1.path2;transcripts=comp163741_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	65352415	65353633	.	-	.	ID=comp163741_c0_seq1.mrna2;geneID=comp163741_c0_seq1.path2;Name=comp163741_c0_seq1;Dir=sensecoverage=100.0;identity=97.9;matches=1140;mismatches=24;indels=1;unknowns=0;Target=comp163741_c0_seq1 268 402 +;locus=RLOC_00018060
Chr2	stalkie_big_nohaplotig	exon	65352415	65353548	97	-	.	Parent=comp163741_c0_seq1.mrna2;Target=comp163741_c0_seq1 31 1165 +
Chr2	stalkie_big_nohaplotig	exon	65353604	65353633	100	-	.	Parent=comp163741_c0_seq1.mrna2;Target=comp163741_c0_seq1 1 30 +
Chr2	stalkie_big_nohaplotig	CDS	65353178	65353311	.	-	0	Parent=comp163741_c0_seq1.mrna2
Chr2	gffcl	locus	65354485	65745076	.	+	.	ID=RLOC_00018061;geneIDs=FBgn0039890.1.path1;transcripts=FBgn0039890.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65354485	65745076	.	+	.	ID=FBgn0039890.1.mrna1;geneID=FBgn0039890.1.path1;Name=FBgn0039890.1;Dir=sensecoverage=79.5;identity=98.2;matches=1649;mismatches=11;indels=20;unknowns=0;locus=RLOC_00018061
Chr2	stalkie_big_nohaplotig	exon	65354485	65354496	40	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 453 479 +
Chr2	stalkie_big_nohaplotig	exon	65355466	65355474	100	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 480 488 +
Chr2	stalkie_big_nohaplotig	exon	65357900	65357907	100	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 489 496 +
Chr2	stalkie_big_nohaplotig	exon	65359129	65359131	100	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 497 499 +
Chr2	stalkie_big_nohaplotig	exon	65372063	65372071	100	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 500 508 +
Chr2	stalkie_big_nohaplotig	exon	65373716	65373723	100	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 509 516 +
Chr2	stalkie_big_nohaplotig	exon	65375058	65375071	78	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 551 564 +
Chr2	stalkie_big_nohaplotig	exon	65376792	65376798	100	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 565 571 +
Chr2	stalkie_big_nohaplotig	exon	65391096	65391104	100	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 572 580 +
Chr2	stalkie_big_nohaplotig	exon	65395718	65395744	61	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 581 610 +
Chr2	stalkie_big_nohaplotig	exon	65403128	65403135	100	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 613 620 +
Chr2	stalkie_big_nohaplotig	exon	65414107	65414110	100	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 630 633 +
Chr2	stalkie_big_nohaplotig	exon	65422015	65422022	100	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 634 641 +
Chr2	stalkie_big_nohaplotig	exon	65423239	65423240	100	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 642 643 +
Chr2	stalkie_big_nohaplotig	exon	65440147	65440153	100	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 644 650 +
Chr2	stalkie_big_nohaplotig	exon	65656118	65656119	100	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 681 682 +
Chr2	stalkie_big_nohaplotig	exon	65666463	65666472	100	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 683 692 +
Chr2	stalkie_big_nohaplotig	exon	65703270	65703273	100	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 693 696 +
Chr2	stalkie_big_nohaplotig	exon	65730033	65730035	100	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 697 699 +
Chr2	stalkie_big_nohaplotig	exon	65731528	65731669	100	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 700 841 +
Chr2	stalkie_big_nohaplotig	exon	65736592	65736764	100	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 842 1014 +
Chr2	stalkie_big_nohaplotig	exon	65742516	65743393	100	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 1015 1892 +
Chr2	stalkie_big_nohaplotig	exon	65743455	65743544	100	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 1893 1982 +
Chr2	stalkie_big_nohaplotig	exon	65744799	65744924	100	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 1983 2108 +
Chr2	stalkie_big_nohaplotig	exon	65744983	65745076	100	+	.	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 2109 2202 +
Chr2	stalkie_big_nohaplotig	CDS	65731609	65731669	.	+	0	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 781 841 +
Chr2	stalkie_big_nohaplotig	CDS	65736592	65736764	.	+	2	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 842 1014 +
Chr2	stalkie_big_nohaplotig	CDS	65742516	65743393	.	+	0	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 1015 1892 +
Chr2	stalkie_big_nohaplotig	CDS	65743455	65743544	.	+	1	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 1893 1982 +
Chr2	stalkie_big_nohaplotig	CDS	65744799	65744924	.	+	1	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 1983 2108 +
Chr2	stalkie_big_nohaplotig	CDS	65744983	65745076	.	+	1	Parent=FBgn0039890.1.mrna1;Target=FBgn0039890.1 2109 2202 +
Chr2	gffcl	locus	65358197	65373345	.	-	.	ID=RLOC_00018062;geneIDs=FBgn0004896.1.path1;transcripts=FBgn0004896.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65358197	65373345	.	-	.	ID=FBgn0004896.1.mrna1;geneID=FBgn0004896.1.path1;Name=FBgn0004896.1;Dir=sensecoverage=100.0;identity=99.8;matches=1258;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018062
Chr2	stalkie_big_nohaplotig	exon	65358197	65359202	99	-	.	Parent=FBgn0004896.1.mrna1;Target=FBgn0004896.1 255 1260 +
Chr2	stalkie_big_nohaplotig	exon	65373092	65373345	100	-	.	Parent=FBgn0004896.1.mrna1;Target=FBgn0004896.1 1 254 +
Chr2	stalkie_big_nohaplotig	CDS	65358197	65359202	.	-	1	Parent=FBgn0004896.1.mrna1;Target=FBgn0004896.1 255 1260 +
Chr2	stalkie_big_nohaplotig	CDS	65373092	65373345	.	-	0	Parent=FBgn0004896.1.mrna1;Target=FBgn0004896.1 1 254 +
Chr2	gffcl	locus	65375292	65378069	.	+	.	ID=RLOC_00018063;geneIDs=comp120116_c0_seq1.path1;transcripts=comp120116_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65375292	65378069	.	+	.	ID=comp120116_c0_seq1.mrna1;geneID=comp120116_c0_seq1.path1;Name=comp120116_c0_seq1;Dir=antisensecoverage=95.1;identity=100.0;matches=608;mismatches=0;indels=0;unknowns=0;Target=comp120116_c0_seq1 530 607 .;locus=RLOC_00018063
Chr2	stalkie_big_nohaplotig	exon	65375292	65375509	100	+	.	Parent=comp120116_c0_seq1.mrna1;Target=comp120116_c0_seq1 391 608 -
Chr2	stalkie_big_nohaplotig	exon	65377062	65377154	100	+	.	Parent=comp120116_c0_seq1.mrna1;Target=comp120116_c0_seq1 298 390 -
Chr2	stalkie_big_nohaplotig	exon	65377332	65377483	100	+	.	Parent=comp120116_c0_seq1.mrna1;Target=comp120116_c0_seq1 146 297 -
Chr2	stalkie_big_nohaplotig	exon	65377925	65378069	100	+	.	Parent=comp120116_c0_seq1.mrna1;Target=comp120116_c0_seq1 1 145 -
Chr2	stalkie_big_nohaplotig	CDS	65375293	65375370	.	+	0	Parent=comp120116_c0_seq1.mrna1
Chr2	gffcl	locus	65382080	65382749	.	-	.	ID=RLOC_00018064;geneIDs=comp154294_c0_seq1.path1;transcripts=comp154294_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65382080	65382749	.	-	.	ID=comp154294_c0_seq1.mrna1;geneID=comp154294_c0_seq1.path1;Name=comp154294_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=670;mismatches=0;indels=0;unknowns=0;Target=comp154294_c0_seq1 671 2 .;CDS_Target=comp154294_c0_seq1 363 229 .;locus=RLOC_00018064
Chr2	stalkie_big_nohaplotig	exon	65382080	65382749	100	-	.	Parent=comp154294_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65382388	65382522	.	-	0	Parent=comp154294_c0_seq1.mrna1
Chr2	gffcl	locus	65387909	65388328	.	+	.	ID=RLOC_00018065;geneIDs=comp118445_c1_seq1.path1;transcripts=comp118445_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65387909	65388328	.	+	.	ID=comp118445_c1_seq1.mrna1;geneID=comp118445_c1_seq1.path1;Name=comp118445_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=419;mismatches=1;indels=0;unknowns=0;Target=comp118445_c1_seq1 420 1 .;CDS_Target=comp118445_c1_seq1 210 115 .;locus=RLOC_00018065
Chr2	stalkie_big_nohaplotig	exon	65387909	65388328	99	+	.	Parent=comp118445_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65388023	65388118	.	+	0	Parent=comp118445_c1_seq1.mrna1
Chr2	gffcl	locus	65415121	65419752	.	+	.	ID=RLOC_00018066;geneIDs=FBgn0034788.1.path1;transcripts=FBgn0034788.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65415121	65419752	.	+	.	ID=FBgn0034788.1.mrna1;geneID=FBgn0034788.1.path1;Name=FBgn0034788.1;Dir=sensecoverage=100.0;identity=99.9;matches=770;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018066
Chr2	stalkie_big_nohaplotig	exon	65415121	65415144	100	+	.	Parent=FBgn0034788.1.mrna1;Target=FBgn0034788.1 1 24 +
Chr2	stalkie_big_nohaplotig	exon	65415229	65415322	100	+	.	Parent=FBgn0034788.1.mrna1;Target=FBgn0034788.1 25 118 +
Chr2	stalkie_big_nohaplotig	exon	65415382	65415575	99	+	.	Parent=FBgn0034788.1.mrna1;Target=FBgn0034788.1 119 312 +
Chr2	stalkie_big_nohaplotig	exon	65415648	65415810	100	+	.	Parent=FBgn0034788.1.mrna1;Target=FBgn0034788.1 313 475 +
Chr2	stalkie_big_nohaplotig	exon	65419401	65419509	100	+	.	Parent=FBgn0034788.1.mrna1;Target=FBgn0034788.1 476 584 +
Chr2	stalkie_big_nohaplotig	exon	65419566	65419752	100	+	.	Parent=FBgn0034788.1.mrna1;Target=FBgn0034788.1 585 771 +
Chr2	stalkie_big_nohaplotig	CDS	65415121	65415144	.	+	0	Parent=FBgn0034788.1.mrna1;Target=FBgn0034788.1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	65415229	65415322	.	+	0	Parent=FBgn0034788.1.mrna1;Target=FBgn0034788.1 25 118 +
Chr2	stalkie_big_nohaplotig	CDS	65415382	65415575	.	+	2	Parent=FBgn0034788.1.mrna1;Target=FBgn0034788.1 119 312 +
Chr2	stalkie_big_nohaplotig	CDS	65415648	65415810	.	+	0	Parent=FBgn0034788.1.mrna1;Target=FBgn0034788.1 313 475 +
Chr2	stalkie_big_nohaplotig	CDS	65419401	65419509	.	+	2	Parent=FBgn0034788.1.mrna1;Target=FBgn0034788.1 476 584 +
Chr2	stalkie_big_nohaplotig	CDS	65419566	65419752	.	+	1	Parent=FBgn0034788.1.mrna1;Target=FBgn0034788.1 585 771 +
Chr2	gffcl	locus	65421193	65421874	.	-	.	ID=RLOC_00018067;geneIDs=comp145084_c0_seq1.path1;transcripts=comp145084_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65421193	65421874	.	-	.	ID=comp145084_c0_seq1.mrna1;geneID=comp145084_c0_seq1.path1;Name=comp145084_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=682;mismatches=0;indels=0;unknowns=0;Target=comp145084_c0_seq1 682 1 .;CDS_Target=comp145084_c0_seq1 458 336 .;locus=RLOC_00018067
Chr2	stalkie_big_nohaplotig	exon	65421193	65421874	100	-	.	Parent=comp145084_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65421417	65421539	.	-	0	Parent=comp145084_c0_seq1.mrna1
Chr2	gffcl	locus	65428917	65429612	.	+	.	ID=RLOC_00018068;geneIDs=comp119189_c0_seq1.path1;transcripts=comp119189_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65428917	65429612	.	+	.	ID=comp119189_c0_seq1.mrna1;geneID=comp119189_c0_seq1.path1;Name=comp119189_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=694;mismatches=2;indels=0;unknowns=0;Target=comp119189_c0_seq1 696 1 .;CDS_Target=comp119189_c0_seq1 616 416 .;locus=RLOC_00018068
Chr2	stalkie_big_nohaplotig	exon	65428917	65429612	99	+	.	Parent=comp119189_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65429332	65429532	.	+	0	Parent=comp119189_c0_seq1.mrna1
Chr2	gffcl	locus	65429910	65430121	.	-	.	ID=RLOC_00018069;geneIDs=comp118643_c0_seq1.path1;transcripts=comp118643_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65429910	65430121	.	-	.	ID=comp118643_c0_seq1.mrna1;geneID=comp118643_c0_seq1.path1;Name=comp118643_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=212;mismatches=0;indels=0;unknowns=0;Target=comp118643_c0_seq1 212 1 .;CDS_Target=comp118643_c0_seq1 153 1 .;locus=RLOC_00018069
Chr2	stalkie_big_nohaplotig	exon	65429910	65430121	100	-	.	Parent=comp118643_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65429969	65430121	.	-	0	Parent=comp118643_c0_seq1.mrna1
Chr2	gffcl	locus	65455515	65493987	.	-	.	ID=RLOC_00018071;geneIDs=FBgn0034792.1.path1;transcripts=FBgn0034792.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65455515	65493987	.	-	.	ID=FBgn0034792.1.mrna1;geneID=FBgn0034792.1.path1;Name=FBgn0034792.1;Dir=sensecoverage=100.0;identity=100.0;matches=2145;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018071
Chr2	stalkie_big_nohaplotig	exon	65455515	65456006	100	-	.	Parent=FBgn0034792.1.mrna1;Target=FBgn0034792.1 1654 2145 +
Chr2	stalkie_big_nohaplotig	exon	65456057	65456222	100	-	.	Parent=FBgn0034792.1.mrna1;Target=FBgn0034792.1 1488 1653 +
Chr2	stalkie_big_nohaplotig	exon	65456285	65456445	100	-	.	Parent=FBgn0034792.1.mrna1;Target=FBgn0034792.1 1327 1487 +
Chr2	stalkie_big_nohaplotig	exon	65456507	65456736	100	-	.	Parent=FBgn0034792.1.mrna1;Target=FBgn0034792.1 1097 1326 +
Chr2	stalkie_big_nohaplotig	exon	65491276	65491589	100	-	.	Parent=FBgn0034792.1.mrna1;Target=FBgn0034792.1 783 1096 +
Chr2	stalkie_big_nohaplotig	exon	65491656	65491738	100	-	.	Parent=FBgn0034792.1.mrna1;Target=FBgn0034792.1 700 782 +
Chr2	stalkie_big_nohaplotig	exon	65491789	65491884	100	-	.	Parent=FBgn0034792.1.mrna1;Target=FBgn0034792.1 604 699 +
Chr2	stalkie_big_nohaplotig	exon	65493264	65493447	100	-	.	Parent=FBgn0034792.1.mrna1;Target=FBgn0034792.1 420 603 +
Chr2	stalkie_big_nohaplotig	exon	65493512	65493900	100	-	.	Parent=FBgn0034792.1.mrna1;Target=FBgn0034792.1 31 419 +
Chr2	stalkie_big_nohaplotig	exon	65493958	65493987	100	-	.	Parent=FBgn0034792.1.mrna1;Target=FBgn0034792.1 1 30 +
Chr2	stalkie_big_nohaplotig	CDS	65455515	65456006	.	-	0	Parent=FBgn0034792.1.mrna1;Target=FBgn0034792.1 1654 2145 +
Chr2	stalkie_big_nohaplotig	CDS	65456057	65456222	.	-	1	Parent=FBgn0034792.1.mrna1;Target=FBgn0034792.1 1488 1653 +
Chr2	stalkie_big_nohaplotig	CDS	65456285	65456445	.	-	0	Parent=FBgn0034792.1.mrna1;Target=FBgn0034792.1 1327 1487 +
Chr2	stalkie_big_nohaplotig	CDS	65456507	65456736	.	-	2	Parent=FBgn0034792.1.mrna1;Target=FBgn0034792.1 1097 1326 +
Chr2	stalkie_big_nohaplotig	CDS	65491276	65491589	.	-	1	Parent=FBgn0034792.1.mrna1;Target=FBgn0034792.1 783 1096 +
Chr2	stalkie_big_nohaplotig	CDS	65491656	65491738	.	-	0	Parent=FBgn0034792.1.mrna1;Target=FBgn0034792.1 700 782 +
Chr2	stalkie_big_nohaplotig	CDS	65491789	65491884	.	-	0	Parent=FBgn0034792.1.mrna1;Target=FBgn0034792.1 604 699 +
Chr2	stalkie_big_nohaplotig	CDS	65493264	65493447	.	-	1	Parent=FBgn0034792.1.mrna1;Target=FBgn0034792.1 420 603 +
Chr2	stalkie_big_nohaplotig	CDS	65493512	65493900	.	-	0	Parent=FBgn0034792.1.mrna1;Target=FBgn0034792.1 31 419 +
Chr2	stalkie_big_nohaplotig	CDS	65493958	65493987	.	-	0	Parent=FBgn0034792.1.mrna1;Target=FBgn0034792.1 1 30 +
Chr2	gffcl	locus	65495820	65496463	.	+	.	ID=RLOC_00018072;geneIDs=comp153300_c0_seq1.path1;transcripts=comp153300_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65495820	65496463	.	+	.	ID=comp153300_c0_seq1.mrna1;geneID=comp153300_c0_seq1.path1;Name=comp153300_c0_seq1;Dir=indeterminatecoverage=84.5;identity=100.0;matches=644;mismatches=0;indels=0;unknowns=0;Target=comp153300_c0_seq1 762 119 .;CDS_Target=comp153300_c0_seq1 692 510 .;locus=RLOC_00018072
Chr2	stalkie_big_nohaplotig	exon	65495820	65496463	100	+	.	Parent=comp153300_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65496211	65496393	.	+	0	Parent=comp153300_c0_seq1.mrna1
Chr2	gffcl	locus	65516865	65518885	.	+	.	ID=RLOC_00018073;geneIDs=FBgn0259979.1.path1;transcripts=FBgn0259979.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65516865	65518885	.	+	.	ID=FBgn0259979.1.mrna1;geneID=FBgn0259979.1.path1;Name=FBgn0259979.1;Dir=sensecoverage=100.0;identity=100.0;matches=1440;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018073
Chr2	stalkie_big_nohaplotig	exon	65516865	65516905	100	+	.	Parent=FBgn0259979.1.mrna1;Target=FBgn0259979.1 1 41 +
Chr2	stalkie_big_nohaplotig	exon	65517005	65517239	100	+	.	Parent=FBgn0259979.1.mrna1;Target=FBgn0259979.1 42 276 +
Chr2	stalkie_big_nohaplotig	exon	65517294	65517827	100	+	.	Parent=FBgn0259979.1.mrna1;Target=FBgn0259979.1 277 810 +
Chr2	stalkie_big_nohaplotig	exon	65517892	65517959	100	+	.	Parent=FBgn0259979.1.mrna1;Target=FBgn0259979.1 811 878 +
Chr2	stalkie_big_nohaplotig	exon	65518198	65518462	100	+	.	Parent=FBgn0259979.1.mrna1;Target=FBgn0259979.1 879 1143 +
Chr2	stalkie_big_nohaplotig	exon	65518525	65518776	100	+	.	Parent=FBgn0259979.1.mrna1;Target=FBgn0259979.1 1144 1395 +
Chr2	stalkie_big_nohaplotig	exon	65518841	65518885	100	+	.	Parent=FBgn0259979.1.mrna1;Target=FBgn0259979.1 1396 1440 +
Chr2	stalkie_big_nohaplotig	CDS	65516865	65516905	.	+	0	Parent=FBgn0259979.1.mrna1;Target=FBgn0259979.1 1 41 +
Chr2	stalkie_big_nohaplotig	CDS	65517005	65517239	.	+	1	Parent=FBgn0259979.1.mrna1;Target=FBgn0259979.1 42 276 +
Chr2	stalkie_big_nohaplotig	CDS	65517294	65517827	.	+	0	Parent=FBgn0259979.1.mrna1;Target=FBgn0259979.1 277 810 +
Chr2	stalkie_big_nohaplotig	CDS	65517892	65517959	.	+	0	Parent=FBgn0259979.1.mrna1;Target=FBgn0259979.1 811 878 +
Chr2	stalkie_big_nohaplotig	CDS	65518198	65518462	.	+	1	Parent=FBgn0259979.1.mrna1;Target=FBgn0259979.1 879 1143 +
Chr2	stalkie_big_nohaplotig	CDS	65518525	65518776	.	+	0	Parent=FBgn0259979.1.mrna1;Target=FBgn0259979.1 1144 1395 +
Chr2	stalkie_big_nohaplotig	CDS	65518841	65518885	.	+	0	Parent=FBgn0259979.1.mrna1;Target=FBgn0259979.1 1396 1440 +
Chr2	gffcl	locus	65518991	65519916	.	-	.	ID=RLOC_00018074;geneIDs=FBgn0034793.1.path1;transcripts=FBgn0034793.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65518991	65519916	.	-	.	ID=FBgn0034793.1.mrna1;geneID=FBgn0034793.1.path1;Name=FBgn0034793.1;Dir=sensecoverage=100.0;identity=99.9;matches=761;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018074
Chr2	stalkie_big_nohaplotig	exon	65518991	65519235	100	-	.	Parent=FBgn0034793.1.mrna1;Target=FBgn0034793.1 518 762 +
Chr2	stalkie_big_nohaplotig	exon	65519290	65519611	99	-	.	Parent=FBgn0034793.1.mrna1;Target=FBgn0034793.1 196 517 +
Chr2	stalkie_big_nohaplotig	exon	65519665	65519802	100	-	.	Parent=FBgn0034793.1.mrna1;Target=FBgn0034793.1 58 195 +
Chr2	stalkie_big_nohaplotig	exon	65519860	65519916	100	-	.	Parent=FBgn0034793.1.mrna1;Target=FBgn0034793.1 1 57 +
Chr2	stalkie_big_nohaplotig	CDS	65518991	65519235	.	-	2	Parent=FBgn0034793.1.mrna1;Target=FBgn0034793.1 518 762 +
Chr2	stalkie_big_nohaplotig	CDS	65519290	65519611	.	-	0	Parent=FBgn0034793.1.mrna1;Target=FBgn0034793.1 196 517 +
Chr2	stalkie_big_nohaplotig	CDS	65519665	65519802	.	-	0	Parent=FBgn0034793.1.mrna1;Target=FBgn0034793.1 58 195 +
Chr2	stalkie_big_nohaplotig	CDS	65519860	65519916	.	-	0	Parent=FBgn0034793.1.mrna1;Target=FBgn0034793.1 1 57 +
Chr2	gffcl	locus	65524147	65537876	.	.	.	ID=RLOC_00018075;geneIDs=FBgn0259978.1.path1,comp156537_c0_seq1.path1;transcripts=FBgn0259978.1.mrna1,comp156537_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65524147	65537876	.	+	.	ID=FBgn0259978.1.mrna1;geneID=FBgn0259978.1.path1;Name=FBgn0259978.1;Dir=sensecoverage=99.5;identity=99.5;matches=1627;mismatches=8;indels=0;unknowns=0;locus=RLOC_00018075
Chr2	stalkie_big_nohaplotig	exon	65524147	65524231	100	+	.	Parent=FBgn0259978.1.mrna1;Target=FBgn0259978.1 10 94 +
Chr2	stalkie_big_nohaplotig	exon	65532720	65533783	99	+	.	Parent=FBgn0259978.1.mrna1;Target=FBgn0259978.1 95 1158 +
Chr2	stalkie_big_nohaplotig	exon	65535520	65535616	100	+	.	Parent=FBgn0259978.1.mrna1;Target=FBgn0259978.1 1159 1255 +
Chr2	stalkie_big_nohaplotig	exon	65537426	65537580	100	+	.	Parent=FBgn0259978.1.mrna1;Target=FBgn0259978.1 1256 1410 +
Chr2	stalkie_big_nohaplotig	exon	65537643	65537876	100	+	.	Parent=FBgn0259978.1.mrna1;Target=FBgn0259978.1 1411 1644 +
Chr2	stalkie_big_nohaplotig	CDS	65524147	65524231	.	+	0	Parent=FBgn0259978.1.mrna1;Target=FBgn0259978.1 10 94 +
Chr2	stalkie_big_nohaplotig	CDS	65532720	65533783	.	+	2	Parent=FBgn0259978.1.mrna1;Target=FBgn0259978.1 95 1158 +
Chr2	stalkie_big_nohaplotig	CDS	65535520	65535616	.	+	0	Parent=FBgn0259978.1.mrna1;Target=FBgn0259978.1 1159 1255 +
Chr2	stalkie_big_nohaplotig	CDS	65537426	65537580	.	+	2	Parent=FBgn0259978.1.mrna1;Target=FBgn0259978.1 1256 1410 +
Chr2	stalkie_big_nohaplotig	CDS	65537643	65537876	.	+	0	Parent=FBgn0259978.1.mrna1;Target=FBgn0259978.1 1411 1644 +
Chr2	stalkie_big_nohaplotig	mRNA	65535594	65537134	.	-	.	ID=comp156537_c0_seq1.mrna1;geneID=comp156537_c0_seq1.path1;Name=comp156537_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1540;mismatches=1;indels=6;unknowns=0;Target=comp156537_c0_seq1 1547 1 .;CDS_Target=comp156537_c0_seq1 717 457 .;locus=RLOC_00018075
Chr2	stalkie_big_nohaplotig	exon	65535594	65537134	99	-	.	Parent=comp156537_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65536424	65536678	.	-	0	Parent=comp156537_c0_seq1.mrna1
Chr2	gffcl	locus	65545046	65545946	.	+	.	ID=RLOC_00018076;geneIDs=comp155578_c0_seq1.path1;transcripts=comp155578_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65545046	65545946	.	+	.	ID=comp155578_c0_seq1.mrna1;geneID=comp155578_c0_seq1.path1;Name=comp155578_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.4;matches=899;mismatches=2;indels=3;unknowns=0;Target=comp155578_c0_seq1 906 3 .;CDS_Target=comp155578_c0_seq1 902 774 .;locus=RLOC_00018076
Chr2	stalkie_big_nohaplotig	exon	65545046	65545946	99	+	.	Parent=comp155578_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65545814	65545942	.	+	0	Parent=comp155578_c0_seq1.mrna1
Chr2	gffcl	locus	65546366	65547546	.	-	.	ID=RLOC_00018077;geneIDs=comp157315_c0_seq1.path1;transcripts=comp157315_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65546366	65547546	.	-	.	ID=comp157315_c0_seq1.mrna1;geneID=comp157315_c0_seq1.path1;Name=comp157315_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.1;matches=1138;mismatches=9;indels=37;unknowns=0;Target=comp157315_c0_seq1 1150 1 .;CDS_Target=comp157315_c0_seq1 594 499 .;locus=RLOC_00018077
Chr2	stalkie_big_nohaplotig	exon	65546366	65547546	96	-	.	Parent=comp157315_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65546922	65547016	.	-	0	Parent=comp157315_c0_seq1.mrna1
Chr2	gffcl	locus	65548974	65549912	.	-	.	ID=RLOC_00018078;geneIDs=comp150563_c0_seq1.path1;transcripts=comp150563_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65548974	65549912	.	-	.	ID=comp150563_c0_seq1.mrna1;geneID=comp150563_c0_seq1.path1;Name=comp150563_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=938;mismatches=1;indels=0;unknowns=0;Target=comp150563_c0_seq1 939 1 .;CDS_Target=comp150563_c0_seq1 881 765 .;locus=RLOC_00018078
Chr2	stalkie_big_nohaplotig	exon	65548974	65549912	99	-	.	Parent=comp150563_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65549032	65549148	.	-	0	Parent=comp150563_c0_seq1.mrna1
Chr2	gffcl	locus	65550379	65572281	.	-	.	ID=RLOC_00018079;geneIDs=FBgn0000099.1.path2;transcripts=FBgn0000099.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	65550379	65572281	.	-	.	ID=FBgn0000099.1.mrna2;geneID=FBgn0000099.1.path2;Name=FBgn0000099.1;Dir=sensecoverage=96.6;identity=99.8;matches=1353;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018079
Chr2	stalkie_big_nohaplotig	exon	65550379	65550549	100	-	.	Parent=FBgn0000099.1.mrna2;Target=FBgn0000099.1 1234 1404 +
Chr2	stalkie_big_nohaplotig	exon	65552711	65552907	98	-	.	Parent=FBgn0000099.1.mrna2;Target=FBgn0000099.1 1037 1233 +
Chr2	stalkie_big_nohaplotig	exon	65558824	65559077	100	-	.	Parent=FBgn0000099.1.mrna2;Target=FBgn0000099.1 783 1036 +
Chr2	stalkie_big_nohaplotig	exon	65559132	65559305	100	-	.	Parent=FBgn0000099.1.mrna2;Target=FBgn0000099.1 609 782 +
Chr2	stalkie_big_nohaplotig	exon	65566653	65566792	100	-	.	Parent=FBgn0000099.1.mrna2;Target=FBgn0000099.1 469 608 +
Chr2	stalkie_big_nohaplotig	exon	65571798	65572014	100	-	.	Parent=FBgn0000099.1.mrna2;Target=FBgn0000099.1 252 468 +
Chr2	stalkie_big_nohaplotig	exon	65572079	65572281	100	-	.	Parent=FBgn0000099.1.mrna2;Target=FBgn0000099.1 49 251 +
Chr2	stalkie_big_nohaplotig	CDS	65550379	65550549	.	-	0	Parent=FBgn0000099.1.mrna2;Target=FBgn0000099.1 1234 1404 +
Chr2	stalkie_big_nohaplotig	CDS	65552711	65552907	.	-	2	Parent=FBgn0000099.1.mrna2;Target=FBgn0000099.1 1037 1233 +
Chr2	stalkie_big_nohaplotig	CDS	65558824	65559077	.	-	1	Parent=FBgn0000099.1.mrna2;Target=FBgn0000099.1 783 1036 +
Chr2	stalkie_big_nohaplotig	CDS	65559132	65559305	.	-	1	Parent=FBgn0000099.1.mrna2;Target=FBgn0000099.1 609 782 +
Chr2	stalkie_big_nohaplotig	CDS	65566653	65566792	.	-	0	Parent=FBgn0000099.1.mrna2;Target=FBgn0000099.1 469 608 +
Chr2	stalkie_big_nohaplotig	CDS	65571798	65572014	.	-	1	Parent=FBgn0000099.1.mrna2;Target=FBgn0000099.1 252 468 +
Chr2	stalkie_big_nohaplotig	CDS	65572079	65572281	.	-	0	Parent=FBgn0000099.1.mrna2;Target=FBgn0000099.1 49 251 +
Chr2	gffcl	locus	65631247	65631294	.	+	.	ID=RLOC_00018080;geneIDs=FBgn0000099.1.path1;transcripts=FBgn0000099.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65631247	65631294	.	+	.	ID=FBgn0000099.1.mrna1;geneID=FBgn0000099.1.path1;Name=FBgn0000099.1;Dir=indeterminatecoverage=3.4;identity=100.0;matches=48;mismatches=0;indels=0;unknowns=0;Target=FBgn0000099.1 48 1 .;locus=RLOC_00018080
Chr2	stalkie_big_nohaplotig	exon	65631247	65631294	100	+	.	Parent=FBgn0000099.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65631247	65631294	.	+	0	Parent=FBgn0000099.1.mrna1
Chr2	gffcl	locus	65669305	65710529	.	+	.	ID=RLOC_00018081;geneIDs=FBgn0034013.1.path1;transcripts=FBgn0034013.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65669305	65710529	.	+	.	ID=FBgn0034013.1.mrna1;geneID=FBgn0034013.1.path1;Name=FBgn0034013.1;Dir=sensecoverage=100.0;identity=99.7;matches=3123;mismatches=8;indels=1;unknowns=0;locus=RLOC_00018081
Chr2	stalkie_big_nohaplotig	exon	65669305	65669354	100	+	.	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 1 50 +
Chr2	stalkie_big_nohaplotig	exon	65671570	65672137	99	+	.	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 51 618 +
Chr2	stalkie_big_nohaplotig	exon	65682330	65682546	99	+	.	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 619 835 +
Chr2	stalkie_big_nohaplotig	exon	65694521	65694726	100	+	.	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 836 1041 +
Chr2	stalkie_big_nohaplotig	exon	65700576	65700654	100	+	.	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 1042 1120 +
Chr2	stalkie_big_nohaplotig	exon	65703724	65703894	98	+	.	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 1121 1291 +
Chr2	stalkie_big_nohaplotig	exon	65703960	65704013	100	+	.	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 1292 1345 +
Chr2	stalkie_big_nohaplotig	exon	65705538	65705765	100	+	.	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 1346 1573 +
Chr2	stalkie_big_nohaplotig	exon	65708774	65708902	100	+	.	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 1574 1702 +
Chr2	stalkie_big_nohaplotig	exon	65708966	65709116	100	+	.	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 1703 1853 +
Chr2	stalkie_big_nohaplotig	exon	65709174	65709247	100	+	.	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 1854 1927 +
Chr2	stalkie_big_nohaplotig	exon	65709326	65710529	99	+	.	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 1928 3132 +
Chr2	stalkie_big_nohaplotig	CDS	65669305	65669354	.	+	0	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 1 50 +
Chr2	stalkie_big_nohaplotig	CDS	65671570	65672137	.	+	1	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 51 618 +
Chr2	stalkie_big_nohaplotig	CDS	65682330	65682546	.	+	0	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 619 835 +
Chr2	stalkie_big_nohaplotig	CDS	65694521	65694726	.	+	2	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 836 1041 +
Chr2	stalkie_big_nohaplotig	CDS	65700576	65700654	.	+	0	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 1042 1120 +
Chr2	stalkie_big_nohaplotig	CDS	65703724	65703894	.	+	2	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 1121 1291 +
Chr2	stalkie_big_nohaplotig	CDS	65703960	65704013	.	+	2	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 1292 1345 +
Chr2	stalkie_big_nohaplotig	CDS	65705538	65705765	.	+	2	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 1346 1573 +
Chr2	stalkie_big_nohaplotig	CDS	65708774	65708902	.	+	2	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 1574 1702 +
Chr2	stalkie_big_nohaplotig	CDS	65708966	65709116	.	+	2	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 1703 1853 +
Chr2	stalkie_big_nohaplotig	CDS	65709174	65709247	.	+	1	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 1854 1927 +
Chr2	stalkie_big_nohaplotig	CDS	65709326	65710529	.	+	2	Parent=FBgn0034013.1.mrna1;Target=FBgn0034013.1 1928 3132 +
Chr2	gffcl	locus	65714353	65715941	.	+	.	ID=RLOC_00018082;geneIDs=comp160497_c0_seq1.path1;transcripts=comp160497_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65714353	65715941	.	+	.	ID=comp160497_c0_seq1.mrna1;geneID=comp160497_c0_seq1.path1;Name=comp160497_c0_seq1;Dir=indeterminatecoverage=99.1;identity=96.4;matches=1541;mismatches=46;indels=11;unknowns=0;Target=comp160497_c0_seq1 1596 1 .;CDS_Target=comp160497_c0_seq1 779 3 .;locus=RLOC_00018082
Chr2	stalkie_big_nohaplotig	exon	65714353	65715941	96	+	.	Parent=comp160497_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65714355	65715126	.	+	0	Parent=comp160497_c0_seq1.mrna1
Chr2	gffcl	locus	65760680	65792992	.	-	.	ID=RLOC_00018083;geneIDs=FBgn0034012.1.path1;transcripts=FBgn0034012.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65760680	65792992	.	-	.	ID=FBgn0034012.1.mrna1;geneID=FBgn0034012.1.path1;Name=FBgn0034012.1;Dir=sensecoverage=97.3;identity=99.9;matches=1548;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018083
Chr2	stalkie_big_nohaplotig	exon	65760680	65760859	98	-	.	Parent=FBgn0034012.1.mrna1;Target=FBgn0034012.1 1414 1593 +
Chr2	stalkie_big_nohaplotig	exon	65760911	65761075	100	-	.	Parent=FBgn0034012.1.mrna1;Target=FBgn0034012.1 1249 1413 +
Chr2	stalkie_big_nohaplotig	exon	65766265	65766420	100	-	.	Parent=FBgn0034012.1.mrna1;Target=FBgn0034012.1 1093 1248 +
Chr2	stalkie_big_nohaplotig	exon	65773548	65773756	100	-	.	Parent=FBgn0034012.1.mrna1;Target=FBgn0034012.1 884 1092 +
Chr2	stalkie_big_nohaplotig	exon	65774993	65775070	100	-	.	Parent=FBgn0034012.1.mrna1;Target=FBgn0034012.1 806 883 +
Chr2	stalkie_big_nohaplotig	exon	65776635	65776865	100	-	.	Parent=FBgn0034012.1.mrna1;Target=FBgn0034012.1 575 805 +
Chr2	stalkie_big_nohaplotig	exon	65776916	65776971	100	-	.	Parent=FBgn0034012.1.mrna1;Target=FBgn0034012.1 519 574 +
Chr2	stalkie_big_nohaplotig	exon	65777032	65777146	100	-	.	Parent=FBgn0034012.1.mrna1;Target=FBgn0034012.1 404 518 +
Chr2	stalkie_big_nohaplotig	exon	65780072	65780175	100	-	.	Parent=FBgn0034012.1.mrna1;Target=FBgn0034012.1 300 403 +
Chr2	stalkie_big_nohaplotig	exon	65792737	65792992	100	-	.	Parent=FBgn0034012.1.mrna1;Target=FBgn0034012.1 44 299 +
Chr2	stalkie_big_nohaplotig	CDS	65760680	65760859	.	-	0	Parent=FBgn0034012.1.mrna1;Target=FBgn0034012.1 1414 1593 +
Chr2	stalkie_big_nohaplotig	CDS	65760911	65761075	.	-	0	Parent=FBgn0034012.1.mrna1;Target=FBgn0034012.1 1249 1413 +
Chr2	stalkie_big_nohaplotig	CDS	65766265	65766420	.	-	0	Parent=FBgn0034012.1.mrna1;Target=FBgn0034012.1 1093 1248 +
Chr2	stalkie_big_nohaplotig	CDS	65773548	65773756	.	-	2	Parent=FBgn0034012.1.mrna1;Target=FBgn0034012.1 884 1092 +
Chr2	stalkie_big_nohaplotig	CDS	65774993	65775070	.	-	2	Parent=FBgn0034012.1.mrna1;Target=FBgn0034012.1 806 883 +
Chr2	stalkie_big_nohaplotig	CDS	65776635	65776865	.	-	2	Parent=FBgn0034012.1.mrna1;Target=FBgn0034012.1 575 805 +
Chr2	stalkie_big_nohaplotig	CDS	65776916	65776971	.	-	1	Parent=FBgn0034012.1.mrna1;Target=FBgn0034012.1 519 574 +
Chr2	stalkie_big_nohaplotig	CDS	65777032	65777146	.	-	2	Parent=FBgn0034012.1.mrna1;Target=FBgn0034012.1 404 518 +
Chr2	stalkie_big_nohaplotig	CDS	65780072	65780175	.	-	1	Parent=FBgn0034012.1.mrna1;Target=FBgn0034012.1 300 403 +
Chr2	stalkie_big_nohaplotig	CDS	65792737	65792990	.	-	0	Parent=FBgn0034012.1.mrna1;Target=FBgn0034012.1 46 299 +
Chr2	gffcl	locus	65781859	65782553	.	-	.	ID=RLOC_00018084;geneIDs=comp137564_c1_seq1.path1;transcripts=comp137564_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65781859	65782553	.	-	.	ID=comp137564_c1_seq1.mrna1;geneID=comp137564_c1_seq1.path1;Name=comp137564_c1_seq1;Dir=indeterminatecoverage=99.7;identity=95.8;matches=666;mismatches=28;indels=1;unknowns=0;Target=comp137564_c1_seq1 694 1 .;CDS_Target=comp137564_c1_seq1 209 69 .;locus=RLOC_00018084
Chr2	stalkie_big_nohaplotig	exon	65781859	65782553	95	-	.	Parent=comp137564_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65782345	65782485	.	-	0	Parent=comp137564_c1_seq1.mrna1
Chr2	gffcl	locus	65844705	65850849	.	-	.	ID=RLOC_00018085;geneIDs=FBgn0013750.1.path1,comp52300_c0_seq1.path1;transcripts=FBgn0013750.1.mrna1,comp52300_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65844705	65850849	.	-	.	ID=FBgn0013750.1.mrna1;geneID=FBgn0013750.1.path1;Name=FBgn0013750.1;Dir=sensecoverage=100.0;identity=99.8;matches=533;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018085
Chr2	stalkie_big_nohaplotig	exon	65844705	65844844	100	-	.	Parent=FBgn0013750.1.mrna1;Target=FBgn0013750.1 395 534 +
Chr2	stalkie_big_nohaplotig	exon	65847401	65847547	100	-	.	Parent=FBgn0013750.1.mrna1;Target=FBgn0013750.1 248 394 +
Chr2	stalkie_big_nohaplotig	exon	65847600	65847755	99	-	.	Parent=FBgn0013750.1.mrna1;Target=FBgn0013750.1 92 247 +
Chr2	stalkie_big_nohaplotig	exon	65850759	65850849	100	-	.	Parent=FBgn0013750.1.mrna1;Target=FBgn0013750.1 1 91 +
Chr2	stalkie_big_nohaplotig	CDS	65844705	65844844	.	-	2	Parent=FBgn0013750.1.mrna1;Target=FBgn0013750.1 395 534 +
Chr2	stalkie_big_nohaplotig	CDS	65847401	65847547	.	-	2	Parent=FBgn0013750.1.mrna1;Target=FBgn0013750.1 248 394 +
Chr2	stalkie_big_nohaplotig	CDS	65847600	65847755	.	-	2	Parent=FBgn0013750.1.mrna1;Target=FBgn0013750.1 92 247 +
Chr2	stalkie_big_nohaplotig	CDS	65850759	65850849	.	-	0	Parent=FBgn0013750.1.mrna1;Target=FBgn0013750.1 1 91 +
Chr2	stalkie_big_nohaplotig	mRNA	65847732	65848151	.	-	.	ID=comp52300_c0_seq1.mrna1;geneID=comp52300_c0_seq1.path1;Name=comp52300_c0_seq1;Dir=sensecoverage=97.3;identity=96.8;matches=213;mismatches=7;indels=0;unknowns=0;Target=comp52300_c0_seq1 9 116 +;locus=RLOC_00018085
Chr2	stalkie_big_nohaplotig	exon	65847732	65847755	100	-	.	Parent=comp52300_c0_seq1.mrna1;Target=comp52300_c0_seq1 203 226 +
Chr2	stalkie_big_nohaplotig	exon	65847864	65847931	100	-	.	Parent=comp52300_c0_seq1.mrna1;Target=comp52300_c0_seq1 135 202 +
Chr2	stalkie_big_nohaplotig	exon	65848024	65848151	94	-	.	Parent=comp52300_c0_seq1.mrna1;Target=comp52300_c0_seq1 7 134 +
Chr2	stalkie_big_nohaplotig	CDS	65848042	65848149	.	-	0	Parent=comp52300_c0_seq1.mrna1
Chr2	gffcl	locus	65845438	65846012	.	-	.	ID=RLOC_00018086;geneIDs=comp149982_c0_seq1.path1;transcripts=comp149982_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65845438	65846012	.	-	.	ID=comp149982_c0_seq1.mrna1;geneID=comp149982_c0_seq1.path1;Name=comp149982_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=574;mismatches=1;indels=0;unknowns=0;Target=comp149982_c0_seq1 575 1 .;CDS_Target=comp149982_c0_seq1 574 533 .;locus=RLOC_00018086
Chr2	stalkie_big_nohaplotig	exon	65845438	65846012	99	-	.	Parent=comp149982_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	65845439	65845480	.	-	0	Parent=comp149982_c0_seq1.mrna1
Chr2	gffcl	locus	65846435	66106692	.	.	.	ID=RLOC_00018087;geneIDs=FBgn0037098.1.path1,comp155319_c1_seq1.path1,comp160720_c2_seq1.path1;transcripts=comp160720_c2_seq1.mrna1,FBgn0037098.1.mrna1,comp155319_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65846435	66106692	.	+	.	ID=comp160720_c2_seq1.mrna1;geneID=comp160720_c2_seq1.path1;Name=comp160720_c2_seq1;Dir=indeterminatecoverage=85.3;identity=86.3;matches=847;mismatches=72;indels=62;unknowns=0;Target=comp160720_c2_seq1 280 248 .;locus=RLOC_00018087
Chr2	stalkie_big_nohaplotig	exon	65846435	65847021	94	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 750 168 .
Chr2	stalkie_big_nohaplotig	exon	65887708	65887718	100	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 761 751 .
Chr2	stalkie_big_nohaplotig	exon	65911436	65911440	100	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 766 762 .
Chr2	stalkie_big_nohaplotig	exon	65925784	65925796	100	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 779 767 .
Chr2	stalkie_big_nohaplotig	exon	65929512	65929514	66	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 795 794 .
Chr2	stalkie_big_nohaplotig	exon	65931339	65931341	100	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 798 796 .
Chr2	stalkie_big_nohaplotig	exon	65933650	65933661	100	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 810 799 .
Chr2	stalkie_big_nohaplotig	exon	65936225	65936226	100	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 817 816 .
Chr2	stalkie_big_nohaplotig	exon	65940715	65940720	100	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 823 818 .
Chr2	stalkie_big_nohaplotig	exon	65941209	65941214	100	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 829 824 .
Chr2	stalkie_big_nohaplotig	exon	65944220	65944225	100	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 835 830 .
Chr2	stalkie_big_nohaplotig	exon	65950763	65950766	100	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 839 836 .
Chr2	stalkie_big_nohaplotig	exon	65969638	65969646	77	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 848 840 .
Chr2	stalkie_big_nohaplotig	exon	65976116	65976117	100	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 850 849 .
Chr2	stalkie_big_nohaplotig	exon	65983581	65983595	80	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 865 851 .
Chr2	stalkie_big_nohaplotig	exon	66021141	66021168	40	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 972 919 .
Chr2	stalkie_big_nohaplotig	exon	66029757	66029761	100	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 991 987 .
Chr2	stalkie_big_nohaplotig	exon	66043464	66043475	100	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 1003 992 .
Chr2	stalkie_big_nohaplotig	exon	66060501	66060534	47	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 1077 1027 .
Chr2	stalkie_big_nohaplotig	exon	66065420	66065431	100	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 1132 1121 .
Chr2	stalkie_big_nohaplotig	exon	66071219	66071256	48	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 1182 1133 .
Chr2	stalkie_big_nohaplotig	exon	66074614	66074619	100	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 1188 1183 .
Chr2	stalkie_big_nohaplotig	exon	66077605	66077612	100	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 1196 1189 .
Chr2	stalkie_big_nohaplotig	exon	66078774	66078782	88	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 1205 1197 .
Chr2	stalkie_big_nohaplotig	exon	66084095	66084113	78	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 1224 1206 .
Chr2	stalkie_big_nohaplotig	exon	66092105	66092107	100	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 1227 1225 .
Chr2	stalkie_big_nohaplotig	exon	66099142	66099148	100	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 1234 1228 .
Chr2	stalkie_big_nohaplotig	exon	66106635	66106692	89	+	.	Parent=comp160720_c2_seq1.mrna1;Target=comp160720_c2_seq1 1292 1235 .
Chr2	stalkie_big_nohaplotig	CDS	65846515	65846547	.	+	0	Parent=comp160720_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66051628	66089794	.	+	.	ID=FBgn0037098.1.mrna1;geneID=FBgn0037098.1.path1;Name=FBgn0037098.1;Dir=sensecoverage=100.0;identity=100.0;matches=6159;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018087
Chr2	stalkie_big_nohaplotig	exon	66051628	66051698	100	+	.	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 1 71 +
Chr2	stalkie_big_nohaplotig	exon	66065187	66066702	100	+	.	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 72 1587 +
Chr2	stalkie_big_nohaplotig	exon	66067985	66068157	100	+	.	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 1588 1760 +
Chr2	stalkie_big_nohaplotig	exon	66068208	66070023	100	+	.	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 1761 3576 +
Chr2	stalkie_big_nohaplotig	exon	66075445	66075576	100	+	.	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 3577 3708 +
Chr2	stalkie_big_nohaplotig	exon	66081364	66081507	100	+	.	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 3709 3852 +
Chr2	stalkie_big_nohaplotig	exon	66083045	66083968	100	+	.	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 3853 4776 +
Chr2	stalkie_big_nohaplotig	exon	66085490	66085691	100	+	.	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 4777 4978 +
Chr2	stalkie_big_nohaplotig	exon	66085751	66086221	100	+	.	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 4979 5449 +
Chr2	stalkie_big_nohaplotig	exon	66086280	66086350	100	+	.	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 5450 5520 +
Chr2	stalkie_big_nohaplotig	exon	66088954	66089125	100	+	.	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 5521 5692 +
Chr2	stalkie_big_nohaplotig	exon	66089207	66089260	100	+	.	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 5693 5746 +
Chr2	stalkie_big_nohaplotig	exon	66089328	66089576	100	+	.	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 5747 5995 +
Chr2	stalkie_big_nohaplotig	exon	66089631	66089794	100	+	.	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 5996 6159 +
Chr2	stalkie_big_nohaplotig	CDS	66051628	66051698	.	+	0	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 1 71 +
Chr2	stalkie_big_nohaplotig	CDS	66065187	66066702	.	+	1	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 72 1587 +
Chr2	stalkie_big_nohaplotig	CDS	66067985	66068157	.	+	0	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 1588 1760 +
Chr2	stalkie_big_nohaplotig	CDS	66068208	66070023	.	+	1	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 1761 3576 +
Chr2	stalkie_big_nohaplotig	CDS	66075445	66075576	.	+	0	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 3577 3708 +
Chr2	stalkie_big_nohaplotig	CDS	66081364	66081507	.	+	0	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 3709 3852 +
Chr2	stalkie_big_nohaplotig	CDS	66083045	66083968	.	+	0	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 3853 4776 +
Chr2	stalkie_big_nohaplotig	CDS	66085490	66085691	.	+	0	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 4777 4978 +
Chr2	stalkie_big_nohaplotig	CDS	66085751	66086221	.	+	2	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 4979 5449 +
Chr2	stalkie_big_nohaplotig	CDS	66086280	66086350	.	+	2	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 5450 5520 +
Chr2	stalkie_big_nohaplotig	CDS	66088954	66089125	.	+	0	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 5521 5692 +
Chr2	stalkie_big_nohaplotig	CDS	66089207	66089260	.	+	2	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 5693 5746 +
Chr2	stalkie_big_nohaplotig	CDS	66089328	66089576	.	+	2	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 5747 5995 +
Chr2	stalkie_big_nohaplotig	CDS	66089631	66089794	.	+	2	Parent=FBgn0037098.1.mrna1;Target=FBgn0037098.1 5996 6159 +
Chr2	stalkie_big_nohaplotig	mRNA	66091852	66092908	.	-	.	ID=comp155319_c1_seq1.mrna1;geneID=comp155319_c1_seq1.path1;Name=comp155319_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1055;mismatches=2;indels=0;unknowns=0;Target=comp155319_c1_seq1 1057 1 .;CDS_Target=comp155319_c1_seq1 868 680 .;locus=RLOC_00018087
Chr2	stalkie_big_nohaplotig	exon	66091852	66092908	99	-	.	Parent=comp155319_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	66092041	66092229	.	-	0	Parent=comp155319_c1_seq1.mrna1
Chr2	gffcl	locus	65926260	65989859	.	+	.	ID=RLOC_00018088;geneIDs=FBgn0005558.1.path1;transcripts=FBgn0005558.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65926260	65989859	.	+	.	ID=FBgn0005558.1.mrna1;geneID=FBgn0005558.1.path1;Name=FBgn0005558.1;Dir=sensecoverage=88.6;identity=99.7;matches=2150;mismatches=6;indels=0;unknowns=0;locus=RLOC_00018088
Chr2	stalkie_big_nohaplotig	exon	65926260	65926425	100	+	.	Parent=FBgn0005558.1.mrna1;Target=FBgn0005558.1 278 443 +
Chr2	stalkie_big_nohaplotig	exon	65926500	65926680	99	+	.	Parent=FBgn0005558.1.mrna1;Target=FBgn0005558.1 444 624 +
Chr2	stalkie_big_nohaplotig	exon	65945874	65946402	99	+	.	Parent=FBgn0005558.1.mrna1;Target=FBgn0005558.1 625 1153 +
Chr2	stalkie_big_nohaplotig	exon	65983801	65983974	98	+	.	Parent=FBgn0005558.1.mrna1;Target=FBgn0005558.1 1154 1327 +
Chr2	stalkie_big_nohaplotig	exon	65984138	65984389	100	+	.	Parent=FBgn0005558.1.mrna1;Target=FBgn0005558.1 1328 1579 +
Chr2	stalkie_big_nohaplotig	exon	65984515	65984893	99	+	.	Parent=FBgn0005558.1.mrna1;Target=FBgn0005558.1 1580 1958 +
Chr2	stalkie_big_nohaplotig	exon	65989385	65989859	100	+	.	Parent=FBgn0005558.1.mrna1;Target=FBgn0005558.1 1959 2433 +
Chr2	stalkie_big_nohaplotig	CDS	65926262	65926425	.	+	0	Parent=FBgn0005558.1.mrna1;Target=FBgn0005558.1 280 443 +
Chr2	stalkie_big_nohaplotig	CDS	65926500	65926680	.	+	1	Parent=FBgn0005558.1.mrna1;Target=FBgn0005558.1 444 624 +
Chr2	stalkie_big_nohaplotig	CDS	65945874	65946402	.	+	0	Parent=FBgn0005558.1.mrna1;Target=FBgn0005558.1 625 1153 +
Chr2	stalkie_big_nohaplotig	CDS	65983801	65983974	.	+	2	Parent=FBgn0005558.1.mrna1;Target=FBgn0005558.1 1154 1327 +
Chr2	stalkie_big_nohaplotig	CDS	65984138	65984389	.	+	2	Parent=FBgn0005558.1.mrna1;Target=FBgn0005558.1 1328 1579 +
Chr2	stalkie_big_nohaplotig	CDS	65984515	65984893	.	+	2	Parent=FBgn0005558.1.mrna1;Target=FBgn0005558.1 1580 1958 +
Chr2	stalkie_big_nohaplotig	CDS	65989385	65989859	.	+	1	Parent=FBgn0005558.1.mrna1;Target=FBgn0005558.1 1959 2433 +
Chr2	gffcl	locus	65928264	66330743	.	.	.	ID=RLOC_00018089;geneIDs=comp135475_c0_seq1.path1,comp149902_c0_seq1.path1;transcripts=comp149902_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	65928264	66329647	.	-	.	ID=comp149902_c0_seq1.mrna1;geneID=comp149902_c0_seq1.path1;Name=comp149902_c0_seq1;Dir=antisensecoverage=68.5;identity=98.0;matches=647;mismatches=5;indels=8;unknowns=0;Target=comp149902_c0_seq1 729 830 .;locus=RLOC_00018089
Chr2	stalkie_big_nohaplotig	exon	65928264	65928279	100	-	.	Parent=comp149902_c0_seq1.mrna1;Target=comp149902_c0_seq1 311 326 -
Chr2	stalkie_big_nohaplotig	exon	65932988	65932995	100	-	.	Parent=comp149902_c0_seq1.mrna1;Target=comp149902_c0_seq1 341 348 -
Chr2	stalkie_big_nohaplotig	exon	65937426	65937427	100	-	.	Parent=comp149902_c0_seq1.mrna1;Target=comp149902_c0_seq1 351 352 -
Chr2	stalkie_big_nohaplotig	exon	65952201	65952209	100	-	.	Parent=comp149902_c0_seq1.mrna1;Target=comp149902_c0_seq1 353 361 -
Chr2	stalkie_big_nohaplotig	exon	65955765	65955782	56	-	.	Parent=comp149902_c0_seq1.mrna1;Target=comp149902_c0_seq1 362 386 -
Chr2	stalkie_big_nohaplotig	exon	65958677	65958679	100	-	.	Parent=comp149902_c0_seq1.mrna1;Target=comp149902_c0_seq1 387 389 -
Chr2	stalkie_big_nohaplotig	exon	65960658	65960667	100	-	.	Parent=comp149902_c0_seq1.mrna1;Target=comp149902_c0_seq1 390 399 -
Chr2	stalkie_big_nohaplotig	exon	65962297	65962301	100	-	.	Parent=comp149902_c0_seq1.mrna1;Target=comp149902_c0_seq1 400 404 -
Chr2	stalkie_big_nohaplotig	exon	65967212	65967216	100	-	.	Parent=comp149902_c0_seq1.mrna1;Target=comp149902_c0_seq1 405 409 -
Chr2	stalkie_big_nohaplotig	exon	66329074	66329647	99	-	.	Parent=comp149902_c0_seq1.mrna1;Target=comp149902_c0_seq1 410 984 -
Chr2	stalkie_big_nohaplotig	CDS	66329392	66329493	.	-	0	Parent=comp149902_c0_seq1.mrna1
Chr2	gffcl	locus	66005838	66007171	.	-	.	ID=RLOC_00018090;geneIDs=comp155859_c0_seq1.path1;transcripts=comp155859_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66005838	66007171	.	-	.	ID=comp155859_c0_seq1.mrna1;geneID=comp155859_c0_seq1.path1;Name=comp155859_c0_seq1;Dir=indeterminatecoverage=92.2;identity=96.4;matches=1309;mismatches=9;indels=40;unknowns=0;Target=comp155859_c0_seq1 1455 114 .;CDS_Target=comp155859_c0_seq1 1348 1181 .;locus=RLOC_00018090
Chr2	stalkie_big_nohaplotig	exon	66005838	66007171	96	-	.	Parent=comp155859_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	66005958	66006125	.	-	0	Parent=comp155859_c0_seq1.mrna1
Chr2	gffcl	locus	66008943	66020812	.	-	.	ID=RLOC_00018091;geneIDs=FBgn0051998.1.path1;transcripts=FBgn0051998.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66008943	66020812	.	-	.	ID=FBgn0051998.1.mrna1;geneID=FBgn0051998.1.path1;Name=FBgn0051998.1;Dir=sensecoverage=100.0;identity=100.0;matches=4638;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018091
Chr2	stalkie_big_nohaplotig	exon	66008943	66012577	100	-	.	Parent=FBgn0051998.1.mrna1;Target=FBgn0051998.1 1004 4638 +
Chr2	stalkie_big_nohaplotig	exon	66019754	66019965	100	-	.	Parent=FBgn0051998.1.mrna1;Target=FBgn0051998.1 792 1003 +
Chr2	stalkie_big_nohaplotig	exon	66020022	66020812	100	-	.	Parent=FBgn0051998.1.mrna1;Target=FBgn0051998.1 1 791 +
Chr2	stalkie_big_nohaplotig	CDS	66008943	66012577	.	-	2	Parent=FBgn0051998.1.mrna1;Target=FBgn0051998.1 1004 4638 +
Chr2	stalkie_big_nohaplotig	CDS	66019754	66019965	.	-	1	Parent=FBgn0051998.1.mrna1;Target=FBgn0051998.1 792 1003 +
Chr2	stalkie_big_nohaplotig	CDS	66020022	66020812	.	-	0	Parent=FBgn0051998.1.mrna1;Target=FBgn0051998.1 1 791 +
Chr2	gffcl	locus	66024867	66025497	.	-	.	ID=RLOC_00018092;geneIDs=comp138788_c0_seq1.path1;transcripts=comp138788_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66024867	66025497	.	-	.	ID=comp138788_c0_seq1.mrna1;geneID=comp138788_c0_seq1.path1;Name=comp138788_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=626;mismatches=5;indels=0;unknowns=0;Target=comp138788_c0_seq1 631 1 .;CDS_Target=comp138788_c0_seq1 305 57 .;locus=RLOC_00018092
Chr2	stalkie_big_nohaplotig	exon	66024867	66025497	99	-	.	Parent=comp138788_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	66025193	66025441	.	-	0	Parent=comp138788_c0_seq1.mrna1
Chr2	gffcl	locus	66035252	66042136	.	+	.	ID=RLOC_00018093;geneIDs=FBgn0024811.1.path1,comp161519_c3_seq1.path1;transcripts=comp161519_c3_seq1.mrna1,FBgn0024811.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66035252	66042136	.	+	.	ID=comp161519_c3_seq1.mrna1;geneID=comp161519_c3_seq1.path1;Name=comp161519_c3_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=2665;mismatches=10;indels=0;unknowns=0;locus=RLOC_00018093
Chr2	stalkie_big_nohaplotig	exon	66035252	66035467	100	+	.	Parent=comp161519_c3_seq1.mrna1;Target=comp161519_c3_seq1 1 216 +
Chr2	stalkie_big_nohaplotig	exon	66035918	66036040	100	+	.	Parent=comp161519_c3_seq1.mrna1;Target=comp161519_c3_seq1 217 339 +
Chr2	stalkie_big_nohaplotig	exon	66036103	66037431	99	+	.	Parent=comp161519_c3_seq1.mrna1;Target=comp161519_c3_seq1 340 1668 +
Chr2	stalkie_big_nohaplotig	exon	66040982	66041134	100	+	.	Parent=comp161519_c3_seq1.mrna1;Target=comp161519_c3_seq1 1669 1821 +
Chr2	stalkie_big_nohaplotig	exon	66041191	66041749	100	+	.	Parent=comp161519_c3_seq1.mrna1;Target=comp161519_c3_seq1 1822 2380 +
Chr2	stalkie_big_nohaplotig	exon	66041842	66042136	100	+	.	Parent=comp161519_c3_seq1.mrna1;Target=comp161519_c3_seq1 2381 2675 +
Chr2	stalkie_big_nohaplotig	CDS	66035436	66035467	.	+	0	Parent=comp161519_c3_seq1.mrna1;Target=comp161519_c3_seq1 185 216 +
Chr2	stalkie_big_nohaplotig	CDS	66035918	66036040	.	+	1	Parent=comp161519_c3_seq1.mrna1;Target=comp161519_c3_seq1 217 339 +
Chr2	stalkie_big_nohaplotig	CDS	66036103	66036397	.	+	1	Parent=comp161519_c3_seq1.mrna1;Target=comp161519_c3_seq1 340 634 +
Chr2	stalkie_big_nohaplotig	mRNA	66035346	66041460	.	+	.	ID=FBgn0024811.1.mrna1;geneID=FBgn0024811.1.path1;Name=FBgn0024811.1;Dir=sensecoverage=100.0;identity=100.0;matches=1002;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018093
Chr2	stalkie_big_nohaplotig	exon	66035346	66035467	100	+	.	Parent=FBgn0024811.1.mrna1;Target=FBgn0024811.1 1 122 +
Chr2	stalkie_big_nohaplotig	exon	66035918	66036040	100	+	.	Parent=FBgn0024811.1.mrna1;Target=FBgn0024811.1 123 245 +
Chr2	stalkie_big_nohaplotig	exon	66036103	66036307	100	+	.	Parent=FBgn0024811.1.mrna1;Target=FBgn0024811.1 246 450 +
Chr2	stalkie_big_nohaplotig	exon	66037303	66037431	100	+	.	Parent=FBgn0024811.1.mrna1;Target=FBgn0024811.1 451 579 +
Chr2	stalkie_big_nohaplotig	exon	66040982	66041134	100	+	.	Parent=FBgn0024811.1.mrna1;Target=FBgn0024811.1 580 732 +
Chr2	stalkie_big_nohaplotig	exon	66041191	66041460	100	+	.	Parent=FBgn0024811.1.mrna1;Target=FBgn0024811.1 733 1002 +
Chr2	stalkie_big_nohaplotig	CDS	66035346	66035467	.	+	0	Parent=FBgn0024811.1.mrna1;Target=FBgn0024811.1 1 122 +
Chr2	stalkie_big_nohaplotig	CDS	66035918	66036040	.	+	1	Parent=FBgn0024811.1.mrna1;Target=FBgn0024811.1 123 245 +
Chr2	stalkie_big_nohaplotig	CDS	66036103	66036307	.	+	1	Parent=FBgn0024811.1.mrna1;Target=FBgn0024811.1 246 450 +
Chr2	stalkie_big_nohaplotig	CDS	66037303	66037431	.	+	0	Parent=FBgn0024811.1.mrna1;Target=FBgn0024811.1 451 579 +
Chr2	stalkie_big_nohaplotig	CDS	66040982	66041134	.	+	0	Parent=FBgn0024811.1.mrna1;Target=FBgn0024811.1 580 732 +
Chr2	stalkie_big_nohaplotig	CDS	66041191	66041460	.	+	0	Parent=FBgn0024811.1.mrna1;Target=FBgn0024811.1 733 1002 +
Chr2	gffcl	locus	66086856	66087467	.	-	.	ID=RLOC_00018094;geneIDs=comp113745_c0_seq1.path1;transcripts=comp113745_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66086856	66087467	.	-	.	ID=comp113745_c0_seq1.mrna1;geneID=comp113745_c0_seq1.path1;Name=comp113745_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=612;mismatches=0;indels=0;unknowns=0;Target=comp113745_c0_seq1 612 1 .;CDS_Target=comp113745_c0_seq1 296 165 .;locus=RLOC_00018094
Chr2	stalkie_big_nohaplotig	exon	66086856	66087467	100	-	.	Parent=comp113745_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	66087172	66087303	.	-	0	Parent=comp113745_c0_seq1.mrna1
Chr2	gffcl	locus	66094655	66095160	.	-	.	ID=RLOC_00018095;geneIDs=FBgn0083968.1.path1;transcripts=FBgn0083968.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66094655	66095160	.	-	.	ID=FBgn0083968.1.mrna1;geneID=FBgn0083968.1.path1;Name=FBgn0083968.1;Dir=sensecoverage=100.0;identity=100.0;matches=396;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018095
Chr2	stalkie_big_nohaplotig	exon	66094655	66094750	100	-	.	Parent=FBgn0083968.1.mrna1;Target=FBgn0083968.1 301 396 +
Chr2	stalkie_big_nohaplotig	exon	66094805	66094873	100	-	.	Parent=FBgn0083968.1.mrna1;Target=FBgn0083968.1 232 300 +
Chr2	stalkie_big_nohaplotig	exon	66094930	66095160	100	-	.	Parent=FBgn0083968.1.mrna1;Target=FBgn0083968.1 1 231 +
Chr2	stalkie_big_nohaplotig	CDS	66094655	66094750	.	-	0	Parent=FBgn0083968.1.mrna1;Target=FBgn0083968.1 301 396 +
Chr2	stalkie_big_nohaplotig	CDS	66094805	66094873	.	-	0	Parent=FBgn0083968.1.mrna1;Target=FBgn0083968.1 232 300 +
Chr2	stalkie_big_nohaplotig	CDS	66094930	66095160	.	-	0	Parent=FBgn0083968.1.mrna1;Target=FBgn0083968.1 1 231 +
Chr2	gffcl	locus	66121313	66139876	.	+	.	ID=RLOC_00018096;geneIDs=FBgn0039936.1.path1,comp158405_c0_seq1.path1;transcripts=FBgn0039936.1.mrna1,comp158405_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66121313	66139876	.	+	.	ID=FBgn0039936.1.mrna1;geneID=FBgn0039936.1.path1;Name=FBgn0039936.1;Dir=sensecoverage=100.0;identity=100.0;matches=4902;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018096
Chr2	stalkie_big_nohaplotig	exon	66121313	66121415	100	+	.	Parent=FBgn0039936.1.mrna1;Target=FBgn0039936.1 1 103 +
Chr2	stalkie_big_nohaplotig	exon	66131030	66131385	100	+	.	Parent=FBgn0039936.1.mrna1;Target=FBgn0039936.1 104 459 +
Chr2	stalkie_big_nohaplotig	exon	66131460	66131633	100	+	.	Parent=FBgn0039936.1.mrna1;Target=FBgn0039936.1 460 633 +
Chr2	stalkie_big_nohaplotig	exon	66133760	66134015	100	+	.	Parent=FBgn0039936.1.mrna1;Target=FBgn0039936.1 634 889 +
Chr2	stalkie_big_nohaplotig	exon	66134079	66137738	100	+	.	Parent=FBgn0039936.1.mrna1;Target=FBgn0039936.1 890 4549 +
Chr2	stalkie_big_nohaplotig	exon	66139407	66139481	100	+	.	Parent=FBgn0039936.1.mrna1;Target=FBgn0039936.1 4550 4624 +
Chr2	stalkie_big_nohaplotig	exon	66139543	66139697	100	+	.	Parent=FBgn0039936.1.mrna1;Target=FBgn0039936.1 4625 4779 +
Chr2	stalkie_big_nohaplotig	exon	66139754	66139876	100	+	.	Parent=FBgn0039936.1.mrna1;Target=FBgn0039936.1 4780 4902 +
Chr2	stalkie_big_nohaplotig	CDS	66121313	66121415	.	+	0	Parent=FBgn0039936.1.mrna1;Target=FBgn0039936.1 1 103 +
Chr2	stalkie_big_nohaplotig	CDS	66131030	66131385	.	+	2	Parent=FBgn0039936.1.mrna1;Target=FBgn0039936.1 104 459 +
Chr2	stalkie_big_nohaplotig	CDS	66131460	66131633	.	+	0	Parent=FBgn0039936.1.mrna1;Target=FBgn0039936.1 460 633 +
Chr2	stalkie_big_nohaplotig	CDS	66133760	66134015	.	+	0	Parent=FBgn0039936.1.mrna1;Target=FBgn0039936.1 634 889 +
Chr2	stalkie_big_nohaplotig	CDS	66134079	66137738	.	+	2	Parent=FBgn0039936.1.mrna1;Target=FBgn0039936.1 890 4549 +
Chr2	stalkie_big_nohaplotig	CDS	66139407	66139481	.	+	2	Parent=FBgn0039936.1.mrna1;Target=FBgn0039936.1 4550 4624 +
Chr2	stalkie_big_nohaplotig	CDS	66139543	66139697	.	+	2	Parent=FBgn0039936.1.mrna1;Target=FBgn0039936.1 4625 4779 +
Chr2	stalkie_big_nohaplotig	CDS	66139754	66139876	.	+	0	Parent=FBgn0039936.1.mrna1;Target=FBgn0039936.1 4780 4902 +
Chr2	stalkie_big_nohaplotig	mRNA	66131822	66133780	.	+	.	ID=comp158405_c0_seq1.mrna1;geneID=comp158405_c0_seq1.path1;Name=comp158405_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1955;mismatches=4;indels=0;unknowns=0;Target=comp158405_c0_seq1 1959 1 .;CDS_Target=comp158405_c0_seq1 1168 1055 .;locus=RLOC_00018096
Chr2	stalkie_big_nohaplotig	exon	66131822	66133780	99	+	.	Parent=comp158405_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	66132876	66132989	.	+	0	Parent=comp158405_c0_seq1.mrna1
Chr2	gffcl	locus	66203796	66205565	.	+	.	ID=RLOC_00018097;geneIDs=comp162823_c3_seq1.path2;transcripts=comp162823_c3_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	66203796	66205565	.	+	.	ID=comp162823_c3_seq1.mrna2;geneID=comp162823_c3_seq1.path2;Name=comp162823_c3_seq1;Dir=indeterminatecoverage=96.3;identity=99.9;matches=1769;mismatches=1;indels=0;unknowns=0;Target=comp162823_c3_seq1 1838 69 .;CDS_Target=comp162823_c3_seq1 139 69 .;locus=RLOC_00018097
Chr2	stalkie_big_nohaplotig	exon	66203796	66205565	99	+	.	Parent=comp162823_c3_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	66203796	66203866	.	+	1	Parent=comp162823_c3_seq1.mrna2
Chr2	gffcl	locus	66219216	66219465	.	+	.	ID=RLOC_00018098;geneIDs=comp115236_c0_seq1.path1;transcripts=comp115236_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66219216	66219465	.	+	.	ID=comp115236_c0_seq1.mrna1;geneID=comp115236_c0_seq1.path1;Name=comp115236_c0_seq1;Dir=indeterminatecoverage=99.6;identity=97.2;matches=243;mismatches=6;indels=1;unknowns=0;Target=comp115236_c0_seq1 250 2 .;CDS_Target=comp115236_c0_seq1 223 125 .;locus=RLOC_00018098
Chr2	stalkie_big_nohaplotig	exon	66219216	66219465	97	+	.	Parent=comp115236_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	66219340	66219438	.	+	0	Parent=comp115236_c0_seq1.mrna1
Chr2	gffcl	locus	66220151	66233111	.	-	.	ID=RLOC_00018099;geneIDs=FBgn0026777.2.path1;transcripts=FBgn0026777.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66220151	66233111	.	-	.	ID=FBgn0026777.2.mrna1;geneID=FBgn0026777.2.path1;Name=FBgn0026777.2;Dir=sensecoverage=100.0;identity=99.3;matches=1359;mismatches=0;indels=9;unknowns=0;locus=RLOC_00018099
Chr2	stalkie_big_nohaplotig	exon	66220151	66220258	100	-	.	Parent=FBgn0026777.2.mrna1;Target=FBgn0026777.2 1261 1368 +
Chr2	stalkie_big_nohaplotig	exon	66227272	66227658	100	-	.	Parent=FBgn0026777.2.mrna1;Target=FBgn0026777.2 874 1260 +
Chr2	stalkie_big_nohaplotig	exon	66227710	66227804	100	-	.	Parent=FBgn0026777.2.mrna1;Target=FBgn0026777.2 779 873 +
Chr2	stalkie_big_nohaplotig	exon	66229047	66229661	98	-	.	Parent=FBgn0026777.2.mrna1;Target=FBgn0026777.2 155 778 +
Chr2	stalkie_big_nohaplotig	exon	66229721	66229799	100	-	.	Parent=FBgn0026777.2.mrna1;Target=FBgn0026777.2 76 154 +
Chr2	stalkie_big_nohaplotig	exon	66233037	66233111	100	-	.	Parent=FBgn0026777.2.mrna1;Target=FBgn0026777.2 1 75 +
Chr2	stalkie_big_nohaplotig	CDS	66220151	66220258	.	-	0	Parent=FBgn0026777.2.mrna1;Target=FBgn0026777.2 1261 1368 +
Chr2	stalkie_big_nohaplotig	CDS	66227272	66227658	.	-	0	Parent=FBgn0026777.2.mrna1;Target=FBgn0026777.2 874 1260 +
Chr2	stalkie_big_nohaplotig	CDS	66227710	66227804	.	-	2	Parent=FBgn0026777.2.mrna1;Target=FBgn0026777.2 779 873 +
Chr2	stalkie_big_nohaplotig	CDS	66229047	66229661	.	-	2	Parent=FBgn0026777.2.mrna1;Target=FBgn0026777.2 155 778 +
Chr2	stalkie_big_nohaplotig	CDS	66229721	66229799	.	-	0	Parent=FBgn0026777.2.mrna1;Target=FBgn0026777.2 76 154 +
Chr2	stalkie_big_nohaplotig	CDS	66233037	66233111	.	-	0	Parent=FBgn0026777.2.mrna1;Target=FBgn0026777.2 1 75 +
Chr2	gffcl	locus	66221455	66222895	.	-	.	ID=RLOC_00018100;geneIDs=comp160469_c0_seq1.path1;transcripts=comp160469_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66221455	66222895	.	-	.	ID=comp160469_c0_seq1.mrna1;geneID=comp160469_c0_seq1.path1;Name=comp160469_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1440;mismatches=1;indels=0;unknowns=0;Target=comp160469_c0_seq1 1441 1 .;CDS_Target=comp160469_c0_seq1 743 513 .;locus=RLOC_00018100
Chr2	stalkie_big_nohaplotig	exon	66221455	66222895	99	-	.	Parent=comp160469_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	66222153	66222383	.	-	0	Parent=comp160469_c0_seq1.mrna1
Chr2	gffcl	locus	66225502	66225714	.	+	.	ID=RLOC_00018101;geneIDs=comp146992_c0_seq1.path1;transcripts=comp146992_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66225502	66225714	.	+	.	ID=comp146992_c0_seq1.mrna1;geneID=comp146992_c0_seq1.path1;Name=comp146992_c0_seq1;Dir=indeterminatecoverage=99.1;identity=95.8;matches=204;mismatches=6;indels=3;unknowns=0;Target=comp146992_c0_seq1 212 3 .;CDS_Target=comp146992_c0_seq1 166 5 .;locus=RLOC_00018101
Chr2	stalkie_big_nohaplotig	exon	66225502	66225714	95	+	.	Parent=comp146992_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	66225504	66225668	.	+	0	Parent=comp146992_c0_seq1.mrna1
Chr2	gffcl	locus	66283335	66315125	.	+	.	ID=RLOC_00018102;geneIDs=comp135221_c0_seq1.path1;transcripts=comp135221_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66283335	66315125	.	+	.	ID=comp135221_c0_seq1.mrna1;geneID=comp135221_c0_seq1.path1;Name=comp135221_c0_seq1;Dir=indeterminatecoverage=89.6;identity=99.3;matches=592;mismatches=1;indels=3;unknowns=0;Target=comp135221_c0_seq1 603 502 .;locus=RLOC_00018102
Chr2	stalkie_big_nohaplotig	exon	66283335	66283341	100	+	.	Parent=comp135221_c0_seq1.mrna1;Target=comp135221_c0_seq1 76 70 .
Chr2	stalkie_big_nohaplotig	exon	66289095	66289098	100	+	.	Parent=comp135221_c0_seq1.mrna1;Target=comp135221_c0_seq1 80 77 .
Chr2	stalkie_big_nohaplotig	exon	66290677	66290678	100	+	.	Parent=comp135221_c0_seq1.mrna1;Target=comp135221_c0_seq1 82 81 .
Chr2	stalkie_big_nohaplotig	exon	66314544	66315125	99	+	.	Parent=comp135221_c0_seq1.mrna1;Target=comp135221_c0_seq1 663 83 .
Chr2	stalkie_big_nohaplotig	CDS	66314964	66315065	.	+	0	Parent=comp135221_c0_seq1.mrna1
Chr2	gffcl	locus	66285063	66285174	.	-	.	ID=RLOC_00018103;geneIDs=comp147099_c0_seq1.path1;transcripts=comp147099_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66285063	66285174	.	-	.	ID=comp147099_c0_seq1.mrna1;geneID=comp147099_c0_seq1.path1;Name=comp147099_c0_seq1;Dir=indeterminatecoverage=15.3;identity=100.0;matches=112;mismatches=0;indels=0;unknowns=0;Target=comp147099_c0_seq1 112 1 .;locus=RLOC_00018103
Chr2	stalkie_big_nohaplotig	exon	66285063	66285174	100	-	.	Parent=comp147099_c0_seq1.mrna1
Chr2	gffcl	locus	66289209	66293704	.	-	.	ID=RLOC_00018104;geneIDs=comp117637_c0_seq1.path1;transcripts=comp117637_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66289209	66293704	.	-	.	ID=comp117637_c0_seq1.mrna1;geneID=comp117637_c0_seq1.path1;Name=comp117637_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=441;mismatches=0;indels=0;unknowns=0;Target=comp117637_c0_seq1 116 289 +;locus=RLOC_00018104
Chr2	stalkie_big_nohaplotig	exon	66289209	66289229	100	-	.	Parent=comp117637_c0_seq1.mrna1;Target=comp117637_c0_seq1 421 441 +
Chr2	stalkie_big_nohaplotig	exon	66293285	66293704	100	-	.	Parent=comp117637_c0_seq1.mrna1;Target=comp117637_c0_seq1 1 420 +
Chr2	stalkie_big_nohaplotig	CDS	66293416	66293589	.	-	0	Parent=comp117637_c0_seq1.mrna1
Chr2	gffcl	locus	66339237	66340454	.	-	.	ID=RLOC_00018105;geneIDs=comp1855175_c0_seq1.path1;transcripts=comp1855175_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66339237	66340454	.	-	.	ID=comp1855175_c0_seq1.mrna1;geneID=comp1855175_c0_seq1.path1;Name=comp1855175_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1218;mismatches=0;indels=0;unknowns=0;Target=comp1855175_c0_seq1 1218 1 .;CDS_Target=comp1855175_c0_seq1 444 253 .;locus=RLOC_00018105
Chr2	stalkie_big_nohaplotig	exon	66339237	66340454	100	-	.	Parent=comp1855175_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	66340011	66340202	.	-	0	Parent=comp1855175_c0_seq1.mrna1
Chr2	gffcl	locus	66353898	66363384	.	-	.	ID=RLOC_00018106;geneIDs=FBgn0087002.1.path1;transcripts=FBgn0087002.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66353898	66363384	.	-	.	ID=FBgn0087002.1.mrna1;geneID=FBgn0087002.1.path1;Name=FBgn0087002.1;Dir=sensecoverage=99.9;identity=100.0;matches=7172;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018106
Chr2	stalkie_big_nohaplotig	exon	66353898	66357028	99	-	.	Parent=FBgn0087002.1.mrna1;Target=FBgn0087002.1 4045 7175 +
Chr2	stalkie_big_nohaplotig	exon	66357086	66357225	100	-	.	Parent=FBgn0087002.1.mrna1;Target=FBgn0087002.1 3905 4044 +
Chr2	stalkie_big_nohaplotig	exon	66358231	66360862	99	-	.	Parent=FBgn0087002.1.mrna1;Target=FBgn0087002.1 1273 3904 +
Chr2	stalkie_big_nohaplotig	exon	66360951	66362074	99	-	.	Parent=FBgn0087002.1.mrna1;Target=FBgn0087002.1 149 1272 +
Chr2	stalkie_big_nohaplotig	exon	66362144	66362173	100	-	.	Parent=FBgn0087002.1.mrna1;Target=FBgn0087002.1 119 148 +
Chr2	stalkie_big_nohaplotig	exon	66362233	66362333	100	-	.	Parent=FBgn0087002.1.mrna1;Target=FBgn0087002.1 18 118 +
Chr2	stalkie_big_nohaplotig	exon	66363368	66363384	100	-	.	Parent=FBgn0087002.1.mrna1;Target=FBgn0087002.1 1 17 +
Chr2	stalkie_big_nohaplotig	CDS	66353900	66357028	.	-	0	Parent=FBgn0087002.1.mrna1;Target=FBgn0087002.1 4045 7173 +
Chr2	stalkie_big_nohaplotig	CDS	66357086	66357225	.	-	2	Parent=FBgn0087002.1.mrna1;Target=FBgn0087002.1 3905 4044 +
Chr2	stalkie_big_nohaplotig	CDS	66358231	66360862	.	-	0	Parent=FBgn0087002.1.mrna1;Target=FBgn0087002.1 1273 3904 +
Chr2	stalkie_big_nohaplotig	CDS	66360951	66362074	.	-	2	Parent=FBgn0087002.1.mrna1;Target=FBgn0087002.1 149 1272 +
Chr2	stalkie_big_nohaplotig	CDS	66362144	66362173	.	-	2	Parent=FBgn0087002.1.mrna1;Target=FBgn0087002.1 119 148 +
Chr2	stalkie_big_nohaplotig	CDS	66362233	66362333	.	-	1	Parent=FBgn0087002.1.mrna1;Target=FBgn0087002.1 18 118 +
Chr2	stalkie_big_nohaplotig	CDS	66363368	66363384	.	-	0	Parent=FBgn0087002.1.mrna1;Target=FBgn0087002.1 1 17 +
Chr2	gffcl	locus	66376184	66376478	.	-	.	ID=RLOC_00018107;geneIDs=comp149990_c0_seq1.path1;transcripts=comp149990_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66376184	66376478	.	-	.	ID=comp149990_c0_seq1.mrna1;geneID=comp149990_c0_seq1.path1;Name=comp149990_c0_seq1;Dir=indeterminatecoverage=97.7;identity=97.6;matches=288;mismatches=7;indels=0;unknowns=0;Target=comp149990_c0_seq1 302 8 .;CDS_Target=comp149990_c0_seq1 264 202 .;locus=RLOC_00018107
Chr2	stalkie_big_nohaplotig	exon	66376184	66376478	97	-	.	Parent=comp149990_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	66376222	66376284	.	-	0	Parent=comp149990_c0_seq1.mrna1
Chr2	gffcl	locus	66376665	66377842	.	.	.	ID=RLOC_00018108;geneIDs=comp100626_c0_seq1.path1,comp150366_c0_seq1.path1;transcripts=comp150366_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66377043	66377842	.	+	.	ID=comp150366_c0_seq1.mrna1;geneID=comp150366_c0_seq1.path1;Name=comp150366_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=797;mismatches=3;indels=0;unknowns=0;Target=comp150366_c0_seq1 800 1 .;CDS_Target=comp150366_c0_seq1 180 1 .;locus=RLOC_00018108
Chr2	stalkie_big_nohaplotig	exon	66377043	66377842	99	+	.	Parent=comp150366_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	66377043	66377222	.	+	0	Parent=comp150366_c0_seq1.mrna1
Chr2	gffcl	locus	66380546	66391946	.	-	.	ID=RLOC_00018109;geneIDs=FBgn0024913.1.path1;transcripts=FBgn0024913.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66380546	66391946	.	-	.	ID=FBgn0024913.1.mrna1;geneID=FBgn0024913.1.path1;Name=FBgn0024913.1;Dir=sensecoverage=100.0;identity=99.7;matches=2455;mismatches=2;indels=6;unknowns=0;locus=RLOC_00018109
Chr2	stalkie_big_nohaplotig	exon	66380546	66381622	99	-	.	Parent=FBgn0024913.1.mrna1;Target=FBgn0024913.1 1387 2457 +
Chr2	stalkie_big_nohaplotig	exon	66382368	66382597	100	-	.	Parent=FBgn0024913.1.mrna1;Target=FBgn0024913.1 1157 1386 +
Chr2	stalkie_big_nohaplotig	exon	66389732	66390328	100	-	.	Parent=FBgn0024913.1.mrna1;Target=FBgn0024913.1 560 1156 +
Chr2	stalkie_big_nohaplotig	exon	66391388	66391946	100	-	.	Parent=FBgn0024913.1.mrna1;Target=FBgn0024913.1 1 559 +
Chr2	stalkie_big_nohaplotig	CDS	66380546	66381622	.	-	0	Parent=FBgn0024913.1.mrna1;Target=FBgn0024913.1 1387 2457 +
Chr2	stalkie_big_nohaplotig	CDS	66382368	66382597	.	-	2	Parent=FBgn0024913.1.mrna1;Target=FBgn0024913.1 1157 1386 +
Chr2	stalkie_big_nohaplotig	CDS	66389732	66390328	.	-	2	Parent=FBgn0024913.1.mrna1;Target=FBgn0024913.1 560 1156 +
Chr2	stalkie_big_nohaplotig	CDS	66391388	66391946	.	-	0	Parent=FBgn0024913.1.mrna1;Target=FBgn0024913.1 1 559 +
Chr2	gffcl	locus	66507123	66518868	.	+	.	ID=RLOC_00018111;geneIDs=FBgn0026869.1.path1;transcripts=FBgn0026869.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66507123	66518868	.	+	.	ID=FBgn0026869.1.mrna1;geneID=FBgn0026869.1.path1;Name=FBgn0026869.1;Dir=sensecoverage=100.0;identity=99.7;matches=5361;mismatches=17;indels=1;unknowns=0;Target=FBgn0026869.1 3 56 +;locus=RLOC_00018111
Chr2	stalkie_big_nohaplotig	exon	66507123	66508614	99	+	.	Parent=FBgn0026869.1.mrna1;Target=FBgn0026869.1 1 1493 +
Chr2	stalkie_big_nohaplotig	exon	66513459	66514064	99	+	.	Parent=FBgn0026869.1.mrna1;Target=FBgn0026869.1 1494 2099 +
Chr2	stalkie_big_nohaplotig	exon	66514116	66514296	100	+	.	Parent=FBgn0026869.1.mrna1;Target=FBgn0026869.1 2100 2280 +
Chr2	stalkie_big_nohaplotig	exon	66515712	66516074	100	+	.	Parent=FBgn0026869.1.mrna1;Target=FBgn0026869.1 2281 2643 +
Chr2	stalkie_big_nohaplotig	exon	66516133	66518868	99	+	.	Parent=FBgn0026869.1.mrna1;Target=FBgn0026869.1 2644 5379 +
Chr2	stalkie_big_nohaplotig	CDS	66507125	66507177	.	+	0	Parent=FBgn0026869.1.mrna1
Chr2	gffcl	locus	66519086	66520194	.	+	.	ID=RLOC_00018112;geneIDs=comp150594_c0_seq1.path1;transcripts=comp150594_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66519086	66520194	.	+	.	ID=comp150594_c0_seq1.mrna1;geneID=comp150594_c0_seq1.path1;Name=comp150594_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.7;matches=1106;mismatches=3;indels=0;unknowns=0;Target=comp150594_c0_seq1 1113 5 .;CDS_Target=comp150594_c0_seq1 369 268 .;locus=RLOC_00018112
Chr2	stalkie_big_nohaplotig	exon	66519086	66520194	99	+	.	Parent=comp150594_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	66519349	66519450	.	+	0	Parent=comp150594_c0_seq1.mrna1
Chr2	gffcl	locus	66520361	66521395	.	-	.	ID=RLOC_00018113;geneIDs=comp144464_c0_seq1.path1;transcripts=comp144464_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66520361	66521395	.	-	.	ID=comp144464_c0_seq1.mrna1;geneID=comp144464_c0_seq1.path1;Name=comp144464_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.9;matches=1035;mismatches=0;indels=1;unknowns=0;Target=comp144464_c0_seq1 1048 13 .;CDS_Target=comp144464_c0_seq1 381 196 .;locus=RLOC_00018113
Chr2	stalkie_big_nohaplotig	exon	66520361	66521395	99	-	.	Parent=comp144464_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	66521028	66521212	.	-	0	Parent=comp144464_c0_seq1.mrna1
Chr2	gffcl	locus	66574352	66574970	.	-	.	ID=RLOC_00018115;geneIDs=comp153081_c0_seq1.path1;transcripts=comp153081_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66574352	66574970	.	-	.	ID=comp153081_c0_seq1.mrna1;geneID=comp153081_c0_seq1.path1;Name=comp153081_c0_seq1;Dir=indeterminatecoverage=97.8;identity=98.9;matches=617;mismatches=2;indels=5;unknowns=0;Target=comp153081_c0_seq1 638 15 .;CDS_Target=comp153081_c0_seq1 230 15 .;locus=RLOC_00018115
Chr2	stalkie_big_nohaplotig	exon	66574352	66574970	98	-	.	Parent=comp153081_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	66574757	66574970	.	-	0	Parent=comp153081_c0_seq1.mrna1
Chr2	gffcl	locus	66576505	66588752	.	-	.	ID=RLOC_00018116;geneIDs=FBgn0025936.1.path1;transcripts=FBgn0025936.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66576505	66588752	.	-	.	ID=FBgn0025936.1.mrna1;geneID=FBgn0025936.1.path1;Name=FBgn0025936.1;Dir=sensecoverage=100.0;identity=100.0;matches=3677;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018116
Chr2	stalkie_big_nohaplotig	exon	66576505	66576606	100	-	.	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 3577 3678 +
Chr2	stalkie_big_nohaplotig	exon	66577688	66578017	99	-	.	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 3247 3576 +
Chr2	stalkie_big_nohaplotig	exon	66578091	66578237	100	-	.	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 3100 3246 +
Chr2	stalkie_big_nohaplotig	exon	66578315	66578685	100	-	.	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 2729 3099 +
Chr2	stalkie_big_nohaplotig	exon	66578743	66578838	100	-	.	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 2633 2728 +
Chr2	stalkie_big_nohaplotig	exon	66578894	66579022	100	-	.	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 2504 2632 +
Chr2	stalkie_big_nohaplotig	exon	66579823	66579870	100	-	.	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 2456 2503 +
Chr2	stalkie_big_nohaplotig	exon	66583075	66583251	100	-	.	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 2279 2455 +
Chr2	stalkie_big_nohaplotig	exon	66583322	66584230	100	-	.	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 1370 2278 +
Chr2	stalkie_big_nohaplotig	exon	66584425	66584805	100	-	.	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 989 1369 +
Chr2	stalkie_big_nohaplotig	exon	66584868	66584972	100	-	.	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 884 988 +
Chr2	stalkie_big_nohaplotig	exon	66585032	66585212	100	-	.	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 703 883 +
Chr2	stalkie_big_nohaplotig	exon	66586376	66586455	100	-	.	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 623 702 +
Chr2	stalkie_big_nohaplotig	exon	66588131	66588752	100	-	.	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 1 622 +
Chr2	stalkie_big_nohaplotig	CDS	66576505	66576606	.	-	0	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 3577 3678 +
Chr2	stalkie_big_nohaplotig	CDS	66577688	66578017	.	-	0	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 3247 3576 +
Chr2	stalkie_big_nohaplotig	CDS	66578091	66578237	.	-	0	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 3100 3246 +
Chr2	stalkie_big_nohaplotig	CDS	66578315	66578685	.	-	2	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 2729 3099 +
Chr2	stalkie_big_nohaplotig	CDS	66578743	66578838	.	-	2	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 2633 2728 +
Chr2	stalkie_big_nohaplotig	CDS	66578894	66579022	.	-	2	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 2504 2632 +
Chr2	stalkie_big_nohaplotig	CDS	66579823	66579870	.	-	2	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 2456 2503 +
Chr2	stalkie_big_nohaplotig	CDS	66583075	66583251	.	-	2	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 2279 2455 +
Chr2	stalkie_big_nohaplotig	CDS	66583322	66584230	.	-	2	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 1370 2278 +
Chr2	stalkie_big_nohaplotig	CDS	66584425	66584805	.	-	2	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 989 1369 +
Chr2	stalkie_big_nohaplotig	CDS	66584868	66584972	.	-	2	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 884 988 +
Chr2	stalkie_big_nohaplotig	CDS	66585032	66585212	.	-	0	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 703 883 +
Chr2	stalkie_big_nohaplotig	CDS	66586376	66586455	.	-	2	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 623 702 +
Chr2	stalkie_big_nohaplotig	CDS	66588131	66588752	.	-	0	Parent=FBgn0025936.1.mrna1;Target=FBgn0025936.1 1 622 +
Chr2	gffcl	locus	66581720	66582160	.	-	.	ID=RLOC_00018117;geneIDs=comp136313_c0_seq1.path1;transcripts=comp136313_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66581720	66582160	.	-	.	ID=comp136313_c0_seq1.mrna1;geneID=comp136313_c0_seq1.path1;Name=comp136313_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=440;mismatches=1;indels=0;unknowns=0;Target=comp136313_c0_seq1 441 1 .;CDS_Target=comp136313_c0_seq1 441 352 .;locus=RLOC_00018117
Chr2	stalkie_big_nohaplotig	exon	66581720	66582160	99	-	.	Parent=comp136313_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	66581720	66581809	.	-	0	Parent=comp136313_c0_seq1.mrna1
Chr2	gffcl	locus	66612417	66625552	.	+	.	ID=RLOC_00018118;geneIDs=FBgn0033426.1.path1;transcripts=FBgn0033426.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66612417	66625552	.	+	.	ID=FBgn0033426.1.mrna1;geneID=FBgn0033426.1.path1;Name=FBgn0033426.1;Dir=sensecoverage=100.0;identity=99.9;matches=1580;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018118
Chr2	stalkie_big_nohaplotig	exon	66612417	66612615	100	+	.	Parent=FBgn0033426.1.mrna1;Target=FBgn0033426.1 1 199 +
Chr2	stalkie_big_nohaplotig	exon	66612855	66613030	100	+	.	Parent=FBgn0033426.1.mrna1;Target=FBgn0033426.1 200 375 +
Chr2	stalkie_big_nohaplotig	exon	66613087	66613314	100	+	.	Parent=FBgn0033426.1.mrna1;Target=FBgn0033426.1 376 603 +
Chr2	stalkie_big_nohaplotig	exon	66613372	66613667	100	+	.	Parent=FBgn0033426.1.mrna1;Target=FBgn0033426.1 604 899 +
Chr2	stalkie_big_nohaplotig	exon	66622188	66622374	100	+	.	Parent=FBgn0033426.1.mrna1;Target=FBgn0033426.1 900 1086 +
Chr2	stalkie_big_nohaplotig	exon	66624943	66625083	100	+	.	Parent=FBgn0033426.1.mrna1;Target=FBgn0033426.1 1087 1227 +
Chr2	stalkie_big_nohaplotig	exon	66625144	66625295	99	+	.	Parent=FBgn0033426.1.mrna1;Target=FBgn0033426.1 1228 1379 +
Chr2	stalkie_big_nohaplotig	exon	66625351	66625552	100	+	.	Parent=FBgn0033426.1.mrna1;Target=FBgn0033426.1 1380 1581 +
Chr2	stalkie_big_nohaplotig	CDS	66612417	66612615	.	+	0	Parent=FBgn0033426.1.mrna1;Target=FBgn0033426.1 1 199 +
Chr2	stalkie_big_nohaplotig	CDS	66612855	66613030	.	+	2	Parent=FBgn0033426.1.mrna1;Target=FBgn0033426.1 200 375 +
Chr2	stalkie_big_nohaplotig	CDS	66613087	66613314	.	+	0	Parent=FBgn0033426.1.mrna1;Target=FBgn0033426.1 376 603 +
Chr2	stalkie_big_nohaplotig	CDS	66613372	66613667	.	+	0	Parent=FBgn0033426.1.mrna1;Target=FBgn0033426.1 604 899 +
Chr2	stalkie_big_nohaplotig	CDS	66622188	66622374	.	+	1	Parent=FBgn0033426.1.mrna1;Target=FBgn0033426.1 900 1086 +
Chr2	stalkie_big_nohaplotig	CDS	66624943	66625083	.	+	0	Parent=FBgn0033426.1.mrna1;Target=FBgn0033426.1 1087 1227 +
Chr2	stalkie_big_nohaplotig	CDS	66625144	66625295	.	+	0	Parent=FBgn0033426.1.mrna1;Target=FBgn0033426.1 1228 1379 +
Chr2	stalkie_big_nohaplotig	CDS	66625351	66625552	.	+	1	Parent=FBgn0033426.1.mrna1;Target=FBgn0033426.1 1380 1581 +
Chr2	gffcl	locus	66663579	66664406	.	-	.	ID=RLOC_00018120;geneIDs=FBgn0019650.1.path1;transcripts=FBgn0019650.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66663579	66664406	.	-	.	ID=FBgn0019650.1.mrna1;geneID=FBgn0019650.1.path1;Name=FBgn0019650.1;Dir=sensecoverage=27.0;identity=100.0;matches=438;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018120
Chr2	stalkie_big_nohaplotig	exon	66663579	66663759	100	-	.	Parent=FBgn0019650.1.mrna1;Target=FBgn0019650.1 258 438 +
Chr2	stalkie_big_nohaplotig	exon	66664150	66664406	100	-	.	Parent=FBgn0019650.1.mrna1;Target=FBgn0019650.1 1 257 +
Chr2	stalkie_big_nohaplotig	CDS	66663579	66663759	.	-	1	Parent=FBgn0019650.1.mrna1;Target=FBgn0019650.1 258 438 +
Chr2	stalkie_big_nohaplotig	CDS	66664150	66664406	.	-	0	Parent=FBgn0019650.1.mrna1;Target=FBgn0019650.1 1 257 +
Chr2	gffcl	locus	66732133	66739526	.	-	.	ID=RLOC_00018121;geneIDs=FBgn0002521.1.path1;transcripts=FBgn0002521.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66732133	66739526	.	-	.	ID=FBgn0002521.1.mrna1;geneID=FBgn0002521.1.path1;Name=FBgn0002521.1;Dir=sensecoverage=100.0;identity=100.0;matches=1695;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018121
Chr2	stalkie_big_nohaplotig	exon	66732133	66732256	100	-	.	Parent=FBgn0002521.1.mrna1;Target=FBgn0002521.1 1572 1695 +
Chr2	stalkie_big_nohaplotig	exon	66735123	66735242	100	-	.	Parent=FBgn0002521.1.mrna1;Target=FBgn0002521.1 1452 1571 +
Chr2	stalkie_big_nohaplotig	exon	66735303	66736379	100	-	.	Parent=FBgn0002521.1.mrna1;Target=FBgn0002521.1 375 1451 +
Chr2	stalkie_big_nohaplotig	exon	66739098	66739260	100	-	.	Parent=FBgn0002521.1.mrna1;Target=FBgn0002521.1 212 374 +
Chr2	stalkie_big_nohaplotig	exon	66739316	66739526	100	-	.	Parent=FBgn0002521.1.mrna1;Target=FBgn0002521.1 1 211 +
Chr2	stalkie_big_nohaplotig	CDS	66732133	66732256	.	-	1	Parent=FBgn0002521.1.mrna1;Target=FBgn0002521.1 1572 1695 +
Chr2	stalkie_big_nohaplotig	CDS	66735123	66735242	.	-	1	Parent=FBgn0002521.1.mrna1;Target=FBgn0002521.1 1452 1571 +
Chr2	stalkie_big_nohaplotig	CDS	66735303	66736379	.	-	1	Parent=FBgn0002521.1.mrna1;Target=FBgn0002521.1 375 1451 +
Chr2	stalkie_big_nohaplotig	CDS	66739098	66739260	.	-	2	Parent=FBgn0002521.1.mrna1;Target=FBgn0002521.1 212 374 +
Chr2	stalkie_big_nohaplotig	CDS	66739316	66739526	.	-	0	Parent=FBgn0002521.1.mrna1;Target=FBgn0002521.1 1 211 +
Chr2	gffcl	locus	66746048	66752768	.	+	.	ID=RLOC_00018122;geneIDs=comp160790_c1_seq1.path3;transcripts=comp160790_c1_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	66746048	66752768	.	+	.	ID=comp160790_c1_seq1.mrna3;geneID=comp160790_c1_seq1.path3;Name=comp160790_c1_seq1;Dir=indeterminatecoverage=99.2;identity=96.6;matches=1464;mismatches=3;indels=49;unknowns=0;locus=RLOC_00018122
Chr2	stalkie_big_nohaplotig	exon	66746048	66746323	99	+	.	Parent=comp160790_c1_seq1.mrna3;Target=comp160790_c1_seq1 288 13 .
Chr2	stalkie_big_nohaplotig	exon	66746465	66746847	100	+	.	Parent=comp160790_c1_seq1.mrna3;Target=comp160790_c1_seq1 671 289 .
Chr2	stalkie_big_nohaplotig	exon	66751852	66752402	90	+	.	Parent=comp160790_c1_seq1.mrna3;Target=comp160790_c1_seq1 1173 672 .
Chr2	stalkie_big_nohaplotig	exon	66752463	66752768	100	+	.	Parent=comp160790_c1_seq1.mrna3;Target=comp160790_c1_seq1 1479 1174 .
Chr2	stalkie_big_nohaplotig	CDS	66746049	66746323	.	+	0	Parent=comp160790_c1_seq1.mrna3;Target=comp160790_c1_seq1 288 14 .
Chr2	stalkie_big_nohaplotig	CDS	66746465	66746639	.	+	1	Parent=comp160790_c1_seq1.mrna3;Target=comp160790_c1_seq1 463 289 .
Chr2	gffcl	locus	66751907	66752702	.	-	.	ID=RLOC_00018124;geneIDs=Dv_FBgn0201266.6.path2;transcripts=Dv_FBgn0201266.6.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	66751907	66752702	.	-	.	ID=Dv_FBgn0201266.6.mrna2;geneID=Dv_FBgn0201266.6.path2;Name=Dv_FBgn0201266.6;Dir=sensecoverage=100.0;identity=99.7;matches=685;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018124
Chr2	stalkie_big_nohaplotig	exon	66751907	66751953	100	-	.	Parent=Dv_FBgn0201266.6.mrna2;Target=Dv_FBgn0201266.6 641 687 +
Chr2	stalkie_big_nohaplotig	exon	66752003	66752402	99	-	.	Parent=Dv_FBgn0201266.6.mrna2;Target=Dv_FBgn0201266.6 241 640 +
Chr2	stalkie_big_nohaplotig	exon	66752463	66752702	100	-	.	Parent=Dv_FBgn0201266.6.mrna2;Target=Dv_FBgn0201266.6 1 240 +
Chr2	stalkie_big_nohaplotig	CDS	66751907	66751953	.	-	2	Parent=Dv_FBgn0201266.6.mrna2;Target=Dv_FBgn0201266.6 641 687 +
Chr2	stalkie_big_nohaplotig	CDS	66752003	66752402	.	-	0	Parent=Dv_FBgn0201266.6.mrna2;Target=Dv_FBgn0201266.6 241 640 +
Chr2	stalkie_big_nohaplotig	CDS	66752463	66752702	.	-	0	Parent=Dv_FBgn0201266.6.mrna2;Target=Dv_FBgn0201266.6 1 240 +
Chr2	gffcl	locus	66763293	66763582	.	+	.	ID=RLOC_00018125;geneIDs=comp152613_c0_seq1.path1;transcripts=comp152613_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66763293	66763582	.	+	.	ID=comp152613_c0_seq1.mrna1;geneID=comp152613_c0_seq1.path1;Name=comp152613_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=288;mismatches=2;indels=0;unknowns=0;Target=comp152613_c0_seq1 290 1 .;CDS_Target=comp152613_c0_seq1 256 185 .;locus=RLOC_00018125
Chr2	stalkie_big_nohaplotig	exon	66763293	66763582	99	+	.	Parent=comp152613_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	66763477	66763548	.	+	0	Parent=comp152613_c0_seq1.mrna1
Chr2	gffcl	locus	66821440	66825778	.	+	.	ID=RLOC_00018128;geneIDs=FBgn0002521.1.path2;transcripts=FBgn0002521.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	66821440	66825778	.	+	.	ID=FBgn0002521.1.mrna2;geneID=FBgn0002521.1.path2;Name=FBgn0002521.1;Dir=sensecoverage=92.7;identity=99.9;matches=1569;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018128
Chr2	stalkie_big_nohaplotig	exon	66821440	66821650	99	+	.	Parent=FBgn0002521.1.mrna2;Target=FBgn0002521.1 1 211 +
Chr2	stalkie_big_nohaplotig	exon	66821706	66821868	99	+	.	Parent=FBgn0002521.1.mrna2;Target=FBgn0002521.1 212 374 +
Chr2	stalkie_big_nohaplotig	exon	66824522	66825598	100	+	.	Parent=FBgn0002521.1.mrna2;Target=FBgn0002521.1 375 1451 +
Chr2	stalkie_big_nohaplotig	exon	66825659	66825778	100	+	.	Parent=FBgn0002521.1.mrna2;Target=FBgn0002521.1 1452 1571 +
Chr2	stalkie_big_nohaplotig	CDS	66821440	66821650	.	+	0	Parent=FBgn0002521.1.mrna2;Target=FBgn0002521.1 1 211 +
Chr2	stalkie_big_nohaplotig	CDS	66821706	66821868	.	+	2	Parent=FBgn0002521.1.mrna2;Target=FBgn0002521.1 212 374 +
Chr2	stalkie_big_nohaplotig	CDS	66824522	66825598	.	+	1	Parent=FBgn0002521.1.mrna2;Target=FBgn0002521.1 375 1451 +
Chr2	stalkie_big_nohaplotig	CDS	66825659	66825776	.	+	1	Parent=FBgn0002521.1.mrna2;Target=FBgn0002521.1 1452 1569 +
Chr2	gffcl	locus	66828752	66872593	.	.	.	ID=RLOC_00018129;geneIDs=comp154490_c0_seq1.path1,comp159652_c1_seq1.path1;transcripts=comp159652_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66828752	66871511	.	-	.	ID=comp159652_c1_seq1.mrna1;geneID=comp159652_c1_seq1.path1;Name=comp159652_c1_seq1;Dir=indeterminatecoverage=99.9;identity=98.7;matches=745;mismatches=10;indels=0;unknowns=0;Target=comp159652_c1_seq1 596 420 .;locus=RLOC_00018129
Chr2	stalkie_big_nohaplotig	exon	66828752	66828860	98	-	.	Parent=comp159652_c1_seq1.mrna1;Target=comp159652_c1_seq1 755 647 .
Chr2	stalkie_big_nohaplotig	exon	66870866	66871511	98	-	.	Parent=comp159652_c1_seq1.mrna1;Target=comp159652_c1_seq1 646 1 .
Chr2	stalkie_big_nohaplotig	CDS	66870916	66871092	.	-	0	Parent=comp159652_c1_seq1.mrna1
Chr2	gffcl	locus	66854781	66855361	.	-	.	ID=RLOC_00018130;geneIDs=comp147783_c0_seq1.path1;transcripts=comp147783_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66854781	66855361	.	-	.	ID=comp147783_c0_seq1.mrna1;geneID=comp147783_c0_seq1.path1;Name=comp147783_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=581;mismatches=0;indels=0;unknowns=0;Target=comp147783_c0_seq1 582 2 .;CDS_Target=comp147783_c0_seq1 321 232 .;locus=RLOC_00018130
Chr2	stalkie_big_nohaplotig	exon	66854781	66855361	100	-	.	Parent=comp147783_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	66855042	66855131	.	-	0	Parent=comp147783_c0_seq1.mrna1
Chr2	gffcl	locus	66867194	66867453	.	-	.	ID=RLOC_00018131;geneIDs=comp118521_c0_seq1.path1;transcripts=comp118521_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66867194	66867453	.	-	.	ID=comp118521_c0_seq1.mrna1;geneID=comp118521_c0_seq1.path1;Name=comp118521_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=260;mismatches=0;indels=0;unknowns=0;Target=comp118521_c0_seq1 260 1 .;CDS_Target=comp118521_c0_seq1 138 55 .;locus=RLOC_00018131
Chr2	stalkie_big_nohaplotig	exon	66867194	66867453	100	-	.	Parent=comp118521_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	66867316	66867399	.	-	0	Parent=comp118521_c0_seq1.mrna1
Chr2	gffcl	locus	66867926	66869026	.	-	.	ID=RLOC_00018132;geneIDs=comp161255_c0_seq1.path1;transcripts=comp161255_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66867926	66869026	.	-	.	ID=comp161255_c0_seq1.mrna1;geneID=comp161255_c0_seq1.path1;Name=comp161255_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.2;matches=1091;mismatches=10;indels=45;unknowns=0;Target=comp161255_c0_seq1 1146 1 .;CDS_Target=comp161255_c0_seq1 618 409 .;locus=RLOC_00018132
Chr2	stalkie_big_nohaplotig	exon	66867926	66869026	95	-	.	Parent=comp161255_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	66868418	66868618	.	-	0	Parent=comp161255_c0_seq1.mrna1
Chr2	gffcl	locus	66890407	66891327	.	-	.	ID=RLOC_00018133;geneIDs=comp151046_c0_seq1.path1;transcripts=comp151046_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66890407	66891327	.	-	.	ID=comp151046_c0_seq1.mrna1;geneID=comp151046_c0_seq1.path1;Name=comp151046_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=911;mismatches=10;indels=0;unknowns=0;Target=comp151046_c0_seq1 921 1 .;CDS_Target=comp151046_c0_seq1 557 303 .;locus=RLOC_00018133
Chr2	stalkie_big_nohaplotig	exon	66890407	66891327	98	-	.	Parent=comp151046_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	66890771	66891025	.	-	0	Parent=comp151046_c0_seq1.mrna1
Chr2	gffcl	locus	66963807	67002159	.	+	.	ID=RLOC_00018135;geneIDs=FBgn0039920.1.path1,FBgn0053653.1.path1;transcripts=FBgn0053653.1.mrna1,FBgn0039920.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	66963807	66993309	.	+	.	ID=FBgn0053653.1.mrna1;geneID=FBgn0053653.1.path1;Name=FBgn0053653.1;Dir=sensecoverage=69.6;identity=100.0;matches=3492;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018135
Chr2	stalkie_big_nohaplotig	exon	66963807	66964353	100	+	.	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 339 885 +
Chr2	stalkie_big_nohaplotig	exon	66969138	66969305	100	+	.	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 886 1053 +
Chr2	stalkie_big_nohaplotig	exon	66969373	66969548	100	+	.	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 1054 1229 +
Chr2	stalkie_big_nohaplotig	exon	66969604	66969835	100	+	.	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 1230 1461 +
Chr2	stalkie_big_nohaplotig	exon	66975259	66975505	100	+	.	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 1462 1708 +
Chr2	stalkie_big_nohaplotig	exon	66975569	66975580	100	+	.	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 1709 1720 +
Chr2	stalkie_big_nohaplotig	exon	66976006	66976012	100	+	.	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 1721 1727 +
Chr2	stalkie_big_nohaplotig	exon	66979262	66979492	100	+	.	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 1728 1958 +
Chr2	stalkie_big_nohaplotig	exon	66979561	66979705	100	+	.	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 1959 2103 +
Chr2	stalkie_big_nohaplotig	exon	66982655	66982761	100	+	.	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 2104 2210 +
Chr2	stalkie_big_nohaplotig	exon	66982832	66983007	100	+	.	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 2211 2386 +
Chr2	stalkie_big_nohaplotig	exon	66983072	66983278	100	+	.	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 2387 2593 +
Chr2	stalkie_big_nohaplotig	exon	66987040	66987176	100	+	.	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 2594 2730 +
Chr2	stalkie_big_nohaplotig	exon	66987246	66987433	100	+	.	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 2731 2918 +
Chr2	stalkie_big_nohaplotig	exon	66987551	66987840	100	+	.	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 2919 3208 +
Chr2	stalkie_big_nohaplotig	exon	66987922	66988034	100	+	.	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 3209 3321 +
Chr2	stalkie_big_nohaplotig	exon	66988403	66988612	100	+	.	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 3322 3531 +
Chr2	stalkie_big_nohaplotig	exon	66992951	66993107	99	+	.	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 3532 3688 +
Chr2	stalkie_big_nohaplotig	exon	66993167	66993309	100	+	.	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 3689 3831 +
Chr2	stalkie_big_nohaplotig	CDS	66963808	66964353	.	+	0	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 340 885 +
Chr2	stalkie_big_nohaplotig	CDS	66969138	66969305	.	+	0	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 886 1053 +
Chr2	stalkie_big_nohaplotig	CDS	66969373	66969548	.	+	0	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 1054 1229 +
Chr2	stalkie_big_nohaplotig	CDS	66969604	66969835	.	+	1	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 1230 1461 +
Chr2	stalkie_big_nohaplotig	CDS	66975259	66975505	.	+	0	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 1462 1708 +
Chr2	stalkie_big_nohaplotig	CDS	66975569	66975580	.	+	2	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 1709 1720 +
Chr2	stalkie_big_nohaplotig	CDS	66976006	66976012	.	+	2	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 1721 1727 +
Chr2	stalkie_big_nohaplotig	CDS	66979262	66979492	.	+	1	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 1728 1958 +
Chr2	stalkie_big_nohaplotig	CDS	66979561	66979705	.	+	1	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 1959 2103 +
Chr2	stalkie_big_nohaplotig	CDS	66982655	66982761	.	+	0	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 2104 2210 +
Chr2	stalkie_big_nohaplotig	CDS	66982832	66983007	.	+	1	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 2211 2386 +
Chr2	stalkie_big_nohaplotig	CDS	66983072	66983278	.	+	2	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 2387 2593 +
Chr2	stalkie_big_nohaplotig	CDS	66987040	66987176	.	+	2	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 2594 2730 +
Chr2	stalkie_big_nohaplotig	CDS	66987246	66987433	.	+	0	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 2731 2918 +
Chr2	stalkie_big_nohaplotig	CDS	66987551	66987840	.	+	1	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 2919 3208 +
Chr2	stalkie_big_nohaplotig	CDS	66987922	66988034	.	+	2	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 3209 3321 +
Chr2	stalkie_big_nohaplotig	CDS	66988403	66988612	.	+	0	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 3322 3531 +
Chr2	stalkie_big_nohaplotig	CDS	66992951	66993107	.	+	0	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 3532 3688 +
Chr2	stalkie_big_nohaplotig	CDS	66993167	66993309	.	+	2	Parent=FBgn0053653.1.mrna1;Target=FBgn0053653.1 3689 3831 +
Chr2	stalkie_big_nohaplotig	mRNA	66964206	67002159	.	+	.	ID=FBgn0039920.1.mrna1;geneID=FBgn0039920.1.path1;Name=FBgn0039920.1;Dir=indeterminatecoverage=73.0;identity=99.6;matches=1559;mismatches=1;indels=6;unknowns=0;Target=FBgn0039920.1 681 675 .;locus=RLOC_00018135
Chr2	stalkie_big_nohaplotig	exon	66964206	66964212	100	+	.	Parent=FBgn0039920.1.mrna1;Target=FBgn0039920.1 681 675 .
Chr2	stalkie_big_nohaplotig	exon	66974971	66974978	100	+	.	Parent=FBgn0039920.1.mrna1;Target=FBgn0039920.1 766 759 .
Chr2	stalkie_big_nohaplotig	exon	66981154	66981169	62	+	.	Parent=FBgn0039920.1.mrna1;Target=FBgn0039920.1 800 791 .
Chr2	stalkie_big_nohaplotig	exon	66990695	66990700	83	+	.	Parent=FBgn0039920.1.mrna1;Target=FBgn0039920.1 869 864 .
Chr2	stalkie_big_nohaplotig	exon	66990777	66990778	100	+	.	Parent=FBgn0039920.1.mrna1;Target=FBgn0039920.1 968 967 .
Chr2	stalkie_big_nohaplotig	exon	67000635	67002159	100	+	.	Parent=FBgn0039920.1.mrna1;Target=FBgn0039920.1 2493 969 .
Chr2	stalkie_big_nohaplotig	CDS	66964206	66964212	.	+	0	Parent=FBgn0039920.1.mrna1
Chr2	gffcl	locus	66992186	66992766	.	-	.	ID=RLOC_00018136;geneIDs=comp147783_c0_seq1.path2;transcripts=comp147783_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	66992186	66992766	.	-	.	ID=comp147783_c0_seq1.mrna2;geneID=comp147783_c0_seq1.path2;Name=comp147783_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=581;mismatches=0;indels=0;unknowns=0;Target=comp147783_c0_seq1 582 2 .;CDS_Target=comp147783_c0_seq1 321 232 .;locus=RLOC_00018136
Chr2	stalkie_big_nohaplotig	exon	66992186	66992766	100	-	.	Parent=comp147783_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	66992447	66992536	.	-	0	Parent=comp147783_c0_seq1.mrna2
Chr2	gffcl	locus	67004298	67005757	.	-	.	ID=RLOC_00018137;geneIDs=comp154679_c0_seq1.path1;transcripts=comp154679_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67004298	67005757	.	-	.	ID=comp154679_c0_seq1.mrna1;geneID=comp154679_c0_seq1.path1;Name=comp154679_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1458;mismatches=2;indels=0;unknowns=0;Target=comp154679_c0_seq1 1460 1 .;CDS_Target=comp154679_c0_seq1 638 570 .;locus=RLOC_00018137
Chr2	stalkie_big_nohaplotig	exon	67004298	67005757	99	-	.	Parent=comp154679_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67005120	67005188	.	-	0	Parent=comp154679_c0_seq1.mrna1
Chr2	gffcl	locus	67051424	67084561	.	+	.	ID=RLOC_00018138;geneIDs=FBgn0039927.1.path1;transcripts=FBgn0039927.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67051424	67084561	.	+	.	ID=FBgn0039927.1.mrna1;geneID=FBgn0039927.1.path1;Name=FBgn0039927.1;Dir=sensecoverage=100.0;identity=99.9;matches=2750;mismatches=4;indels=0;unknowns=0;locus=RLOC_00018138
Chr2	stalkie_big_nohaplotig	exon	67051424	67051574	100	+	.	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 1 151 +
Chr2	stalkie_big_nohaplotig	exon	67051624	67052037	99	+	.	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 152 565 +
Chr2	stalkie_big_nohaplotig	exon	67052209	67052390	100	+	.	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 566 747 +
Chr2	stalkie_big_nohaplotig	exon	67054325	67054378	100	+	.	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 748 801 +
Chr2	stalkie_big_nohaplotig	exon	67060437	67060601	100	+	.	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 802 966 +
Chr2	stalkie_big_nohaplotig	exon	67069781	67069933	100	+	.	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 967 1119 +
Chr2	stalkie_big_nohaplotig	exon	67070000	67070203	100	+	.	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 1120 1323 +
Chr2	stalkie_big_nohaplotig	exon	67070285	67070488	100	+	.	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 1324 1527 +
Chr2	stalkie_big_nohaplotig	exon	67070581	67070685	100	+	.	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 1528 1632 +
Chr2	stalkie_big_nohaplotig	exon	67070774	67071031	100	+	.	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 1633 1890 +
Chr2	stalkie_big_nohaplotig	exon	67073731	67073928	100	+	.	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 1891 2088 +
Chr2	stalkie_big_nohaplotig	exon	67073987	67074194	99	+	.	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 2089 2296 +
Chr2	stalkie_big_nohaplotig	exon	67084049	67084231	99	+	.	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 2297 2479 +
Chr2	stalkie_big_nohaplotig	exon	67084287	67084561	100	+	.	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 2480 2754 +
Chr2	stalkie_big_nohaplotig	CDS	67051424	67051574	.	+	0	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 1 151 +
Chr2	stalkie_big_nohaplotig	CDS	67051624	67052037	.	+	2	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 152 565 +
Chr2	stalkie_big_nohaplotig	CDS	67052209	67052390	.	+	2	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 566 747 +
Chr2	stalkie_big_nohaplotig	CDS	67054325	67054378	.	+	0	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 748 801 +
Chr2	stalkie_big_nohaplotig	CDS	67060437	67060601	.	+	0	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 802 966 +
Chr2	stalkie_big_nohaplotig	CDS	67069781	67069933	.	+	0	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 967 1119 +
Chr2	stalkie_big_nohaplotig	CDS	67070000	67070203	.	+	0	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 1120 1323 +
Chr2	stalkie_big_nohaplotig	CDS	67070285	67070488	.	+	0	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 1324 1527 +
Chr2	stalkie_big_nohaplotig	CDS	67070581	67070685	.	+	0	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 1528 1632 +
Chr2	stalkie_big_nohaplotig	CDS	67070774	67071031	.	+	0	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 1633 1890 +
Chr2	stalkie_big_nohaplotig	CDS	67073731	67073928	.	+	0	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 1891 2088 +
Chr2	stalkie_big_nohaplotig	CDS	67073987	67074194	.	+	0	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 2089 2296 +
Chr2	stalkie_big_nohaplotig	CDS	67084049	67084231	.	+	2	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 2297 2479 +
Chr2	stalkie_big_nohaplotig	CDS	67084287	67084561	.	+	2	Parent=FBgn0039927.1.mrna1;Target=FBgn0039927.1 2480 2754 +
Chr2	gffcl	locus	67087009	67087428	.	+	.	ID=RLOC_00018139;geneIDs=Dp_FBgn0245431.1.path3;transcripts=Dp_FBgn0245431.1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	67087009	67087428	.	+	.	ID=Dp_FBgn0245431.1.mrna3;geneID=Dp_FBgn0245431.1.path3;Name=Dp_FBgn0245431.1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=414;mismatches=6;indels=0;unknowns=0;Target=Dp_FBgn0245431.1 420 1 .;locus=RLOC_00018139
Chr2	stalkie_big_nohaplotig	exon	67087009	67087428	98	+	.	Parent=Dp_FBgn0245431.1.mrna3
Chr2	stalkie_big_nohaplotig	CDS	67087009	67087428	.	+	0	Parent=Dp_FBgn0245431.1.mrna3
Chr2	gffcl	locus	67099495	67100615	.	-	.	ID=RLOC_00018142;geneIDs=comp163371_c2_seq1.path1;transcripts=comp163371_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67099495	67100615	.	-	.	ID=comp163371_c2_seq1.mrna1;geneID=comp163371_c2_seq1.path1;Name=comp163371_c2_seq1;Dir=indeterminatecoverage=75.2;identity=98.4;matches=1103;mismatches=11;indels=7;unknowns=0;Target=comp163371_c2_seq1 1114 1 .;CDS_Target=comp163371_c2_seq1 210 7 .;locus=RLOC_00018142
Chr2	stalkie_big_nohaplotig	exon	67099495	67100615	98	-	.	Parent=comp163371_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67100406	67100609	.	-	0	Parent=comp163371_c2_seq1.mrna1
Chr2	gffcl	locus	67104661	67105015	.	+	.	ID=RLOC_00018143;geneIDs=comp147221_c0_seq1.path1;transcripts=comp147221_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67104661	67105015	.	+	.	ID=comp147221_c0_seq1.mrna1;geneID=comp147221_c0_seq1.path1;Name=comp147221_c0_seq1;Dir=indeterminatecoverage=58.9;identity=100.0;matches=355;mismatches=0;indels=0;unknowns=0;Target=comp147221_c0_seq1 356 2 .;CDS_Target=comp147221_c0_seq1 279 202 .;locus=RLOC_00018143
Chr2	stalkie_big_nohaplotig	exon	67104661	67105015	100	+	.	Parent=comp147221_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67104861	67104938	.	+	0	Parent=comp147221_c0_seq1.mrna1
Chr2	gffcl	locus	67109527	67110014	.	-	.	ID=RLOC_00018144;geneIDs=comp146246_c0_seq1.path1;transcripts=comp146246_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67109527	67110014	.	-	.	ID=comp146246_c0_seq1.mrna1;geneID=comp146246_c0_seq1.path1;Name=comp146246_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=409;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018144
Chr2	stalkie_big_nohaplotig	exon	67109527	67109718	100	-	.	Parent=comp146246_c0_seq1.mrna1;Target=comp146246_c0_seq1 1 192 -
Chr2	stalkie_big_nohaplotig	exon	67109798	67110014	100	-	.	Parent=comp146246_c0_seq1.mrna1;Target=comp146246_c0_seq1 193 409 -
Chr2	stalkie_big_nohaplotig	CDS	67109688	67109718	.	-	1	Parent=comp146246_c0_seq1.mrna1;Target=comp146246_c0_seq1 162 192 .
Chr2	stalkie_big_nohaplotig	CDS	67109798	67109892	.	-	0	Parent=comp146246_c0_seq1.mrna1;Target=comp146246_c0_seq1 193 287 .
Chr2	gffcl	locus	67114542	67115948	.	+	.	ID=RLOC_00018145;geneIDs=comp149447_c0_seq1.path1;transcripts=comp149447_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67114542	67115948	.	+	.	ID=comp149447_c0_seq1.mrna1;geneID=comp149447_c0_seq1.path1;Name=comp149447_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1403;mismatches=4;indels=0;unknowns=0;Target=comp149447_c0_seq1 1407 1 .;CDS_Target=comp149447_c0_seq1 1243 1049 .;locus=RLOC_00018145
Chr2	stalkie_big_nohaplotig	exon	67114542	67115948	99	+	.	Parent=comp149447_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67115590	67115784	.	+	0	Parent=comp149447_c0_seq1.mrna1
Chr2	gffcl	locus	67118244	67167569	.	.	.	ID=RLOC_00018146;geneIDs=FBgn0039911.1.path1,FBgn0040324.1.path1,comp150272_c0_seq1.path1,comp154199_c0_seq1.path1,comp161011_c1_seq1.path1;transcripts=comp161011_c1_seq1.mrna1,FBgn0039911.1.mrna1,comp154199_c0_seq1.mrna1,comp150272_c0_seq1.mrna1,FBgn0040324.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67118244	67167569	.	-	.	ID=comp161011_c1_seq1.mrna1;geneID=comp161011_c1_seq1.path1;Name=comp161011_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=5602;mismatches=6;indels=1;unknowns=0;locus=RLOC_00018146
Chr2	stalkie_big_nohaplotig	exon	67118244	67118411	100	-	.	Parent=comp161011_c1_seq1.mrna1;Target=comp161011_c1_seq1 5609 5442 .
Chr2	stalkie_big_nohaplotig	exon	67122320	67122372	100	-	.	Parent=comp161011_c1_seq1.mrna1;Target=comp161011_c1_seq1 5441 5389 .
Chr2	stalkie_big_nohaplotig	exon	67122431	67122513	100	-	.	Parent=comp161011_c1_seq1.mrna1;Target=comp161011_c1_seq1 5388 5306 .
Chr2	stalkie_big_nohaplotig	exon	67122584	67122750	100	-	.	Parent=comp161011_c1_seq1.mrna1;Target=comp161011_c1_seq1 5305 5139 .
Chr2	stalkie_big_nohaplotig	exon	67122964	67123626	100	-	.	Parent=comp161011_c1_seq1.mrna1;Target=comp161011_c1_seq1 5138 4476 .
Chr2	stalkie_big_nohaplotig	exon	67123691	67123789	100	-	.	Parent=comp161011_c1_seq1.mrna1;Target=comp161011_c1_seq1 4475 4377 .
Chr2	stalkie_big_nohaplotig	exon	67123860	67124051	100	-	.	Parent=comp161011_c1_seq1.mrna1;Target=comp161011_c1_seq1 4376 4185 .
Chr2	stalkie_big_nohaplotig	exon	67126775	67126974	100	-	.	Parent=comp161011_c1_seq1.mrna1;Target=comp161011_c1_seq1 4184 3985 .
Chr2	stalkie_big_nohaplotig	exon	67127467	67129465	99	-	.	Parent=comp161011_c1_seq1.mrna1;Target=comp161011_c1_seq1 3984 1985 .
Chr2	stalkie_big_nohaplotig	exon	67158437	67159012	100	-	.	Parent=comp161011_c1_seq1.mrna1;Target=comp161011_c1_seq1 1984 1409 .
Chr2	stalkie_big_nohaplotig	exon	67159064	67159374	100	-	.	Parent=comp161011_c1_seq1.mrna1;Target=comp161011_c1_seq1 1408 1098 .
Chr2	stalkie_big_nohaplotig	exon	67164970	67165749	100	-	.	Parent=comp161011_c1_seq1.mrna1;Target=comp161011_c1_seq1 1097 318 .
Chr2	stalkie_big_nohaplotig	exon	67167253	67167569	100	-	.	Parent=comp161011_c1_seq1.mrna1;Target=comp161011_c1_seq1 317 1 .
Chr2	stalkie_big_nohaplotig	CDS	67129446	67129465	.	-	2	Parent=comp161011_c1_seq1.mrna1;Target=comp161011_c1_seq1 2004 1985 .
Chr2	stalkie_big_nohaplotig	CDS	67158437	67159012	.	-	2	Parent=comp161011_c1_seq1.mrna1;Target=comp161011_c1_seq1 1984 1409 .
Chr2	stalkie_big_nohaplotig	CDS	67159064	67159374	.	-	1	Parent=comp161011_c1_seq1.mrna1;Target=comp161011_c1_seq1 1408 1098 .
Chr2	stalkie_big_nohaplotig	CDS	67164970	67165682	.	-	0	Parent=comp161011_c1_seq1.mrna1;Target=comp161011_c1_seq1 1097 385 .
Chr2	stalkie_big_nohaplotig	mRNA	67122332	67127878	.	+	.	ID=FBgn0039911.1.mrna1;geneID=FBgn0039911.1.path1;Name=FBgn0039911.1;Dir=sensecoverage=100.0;identity=99.9;matches=1856;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018146
Chr2	stalkie_big_nohaplotig	exon	67122332	67122372	100	+	.	Parent=FBgn0039911.1.mrna1;Target=FBgn0039911.1 1 41 +
Chr2	stalkie_big_nohaplotig	exon	67122431	67122513	100	+	.	Parent=FBgn0039911.1.mrna1;Target=FBgn0039911.1 42 124 +
Chr2	stalkie_big_nohaplotig	exon	67122584	67122750	100	+	.	Parent=FBgn0039911.1.mrna1;Target=FBgn0039911.1 125 291 +
Chr2	stalkie_big_nohaplotig	exon	67122964	67123626	100	+	.	Parent=FBgn0039911.1.mrna1;Target=FBgn0039911.1 292 954 +
Chr2	stalkie_big_nohaplotig	exon	67123691	67123789	100	+	.	Parent=FBgn0039911.1.mrna1;Target=FBgn0039911.1 955 1053 +
Chr2	stalkie_big_nohaplotig	exon	67123860	67124051	100	+	.	Parent=FBgn0039911.1.mrna1;Target=FBgn0039911.1 1054 1245 +
Chr2	stalkie_big_nohaplotig	exon	67126775	67126974	100	+	.	Parent=FBgn0039911.1.mrna1;Target=FBgn0039911.1 1246 1445 +
Chr2	stalkie_big_nohaplotig	exon	67127467	67127878	99	+	.	Parent=FBgn0039911.1.mrna1;Target=FBgn0039911.1 1446 1857 +
Chr2	stalkie_big_nohaplotig	CDS	67122332	67122372	.	+	0	Parent=FBgn0039911.1.mrna1;Target=FBgn0039911.1 1 41 +
Chr2	stalkie_big_nohaplotig	CDS	67122431	67122513	.	+	1	Parent=FBgn0039911.1.mrna1;Target=FBgn0039911.1 42 124 +
Chr2	stalkie_big_nohaplotig	CDS	67122584	67122750	.	+	2	Parent=FBgn0039911.1.mrna1;Target=FBgn0039911.1 125 291 +
Chr2	stalkie_big_nohaplotig	CDS	67122964	67123626	.	+	0	Parent=FBgn0039911.1.mrna1;Target=FBgn0039911.1 292 954 +
Chr2	stalkie_big_nohaplotig	CDS	67123691	67123789	.	+	0	Parent=FBgn0039911.1.mrna1;Target=FBgn0039911.1 955 1053 +
Chr2	stalkie_big_nohaplotig	CDS	67123860	67124051	.	+	0	Parent=FBgn0039911.1.mrna1;Target=FBgn0039911.1 1054 1245 +
Chr2	stalkie_big_nohaplotig	CDS	67126775	67126974	.	+	0	Parent=FBgn0039911.1.mrna1;Target=FBgn0039911.1 1246 1445 +
Chr2	stalkie_big_nohaplotig	CDS	67127467	67127878	.	+	1	Parent=FBgn0039911.1.mrna1;Target=FBgn0039911.1 1446 1857 +
Chr2	stalkie_big_nohaplotig	mRNA	67125733	67126796	.	-	.	ID=comp154199_c0_seq1.mrna1;geneID=comp154199_c0_seq1.path1;Name=comp154199_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1062;mismatches=2;indels=0;unknowns=0;Target=comp154199_c0_seq1 1064 1 .;CDS_Target=comp154199_c0_seq1 840 616 .;locus=RLOC_00018146
Chr2	stalkie_big_nohaplotig	exon	67125733	67126796	99	-	.	Parent=comp154199_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67125957	67126181	.	-	0	Parent=comp154199_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67126954	67127277	.	-	.	ID=comp150272_c0_seq1.mrna1;geneID=comp150272_c0_seq1.path1;Name=comp150272_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=324;mismatches=0;indels=0;unknowns=0;Target=comp150272_c0_seq1 324 1 .;CDS_Target=comp150272_c0_seq1 86 3 .;locus=RLOC_00018146
Chr2	stalkie_big_nohaplotig	exon	67126954	67127277	100	-	.	Parent=comp150272_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67127192	67127275	.	-	0	Parent=comp150272_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67149933	67165685	.	-	.	ID=FBgn0040324.1.mrna1;geneID=FBgn0040324.1.path1;Name=FBgn0040324.1;Dir=sensecoverage=100.0;identity=100.0;matches=2103;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018146
Chr2	stalkie_big_nohaplotig	exon	67149933	67150432	100	-	.	Parent=FBgn0040324.1.mrna1;Target=FBgn0040324.1 1604 2103 +
Chr2	stalkie_big_nohaplotig	exon	67158437	67159012	100	-	.	Parent=FBgn0040324.1.mrna1;Target=FBgn0040324.1 1028 1603 +
Chr2	stalkie_big_nohaplotig	exon	67159064	67159374	100	-	.	Parent=FBgn0040324.1.mrna1;Target=FBgn0040324.1 717 1027 +
Chr2	stalkie_big_nohaplotig	exon	67164970	67165685	100	-	.	Parent=FBgn0040324.1.mrna1;Target=FBgn0040324.1 1 716 +
Chr2	stalkie_big_nohaplotig	CDS	67149933	67150432	.	-	2	Parent=FBgn0040324.1.mrna1;Target=FBgn0040324.1 1604 2103 +
Chr2	stalkie_big_nohaplotig	CDS	67158437	67159012	.	-	2	Parent=FBgn0040324.1.mrna1;Target=FBgn0040324.1 1028 1603 +
Chr2	stalkie_big_nohaplotig	CDS	67159064	67159374	.	-	1	Parent=FBgn0040324.1.mrna1;Target=FBgn0040324.1 717 1027 +
Chr2	stalkie_big_nohaplotig	CDS	67164970	67165685	.	-	0	Parent=FBgn0040324.1.mrna1;Target=FBgn0040324.1 1 716 +
Chr2	stalkie_big_nohaplotig	mRNA	67146150	67308653	.	-	.	ID=comp162867_c0_seq1.mrna1;geneID=comp162867_c0_seq1.path1;Name=comp162867_c0_seq1;Dir=indeterminatecoverage=81.3;identity=98.8;matches=403;mismatches=5;indels=0;unknowns=0;Target=comp162867_c0_seq1 418 314 .;locus=RLOC_00018147
Chr2	stalkie_big_nohaplotig	exon	67146150	67146528	99	-	.	Parent=comp162867_c0_seq1.mrna1;Target=comp162867_c0_seq1 502 124 .
Chr2	stalkie_big_nohaplotig	exon	67297787	67297790	75	-	.	Parent=comp162867_c0_seq1.mrna1;Target=comp162867_c0_seq1 123 120 .
Chr2	stalkie_big_nohaplotig	exon	67304965	67304966	100	-	.	Parent=comp162867_c0_seq1.mrna1;Target=comp162867_c0_seq1 119 118 .
Chr2	stalkie_big_nohaplotig	exon	67306509	67306516	75	-	.	Parent=comp162867_c0_seq1.mrna1;Target=comp162867_c0_seq1 117 110 .
Chr2	stalkie_big_nohaplotig	exon	67308373	67308378	100	-	.	Parent=comp162867_c0_seq1.mrna1;Target=comp162867_c0_seq1 109 104 .
Chr2	stalkie_big_nohaplotig	exon	67308645	67308653	100	-	.	Parent=comp162867_c0_seq1.mrna1;Target=comp162867_c0_seq1 103 95 .
Chr2	stalkie_big_nohaplotig	CDS	67146234	67146338	.	-	0	Parent=comp162867_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67299239	67301788	.	-	.	ID=comp160213_c2_seq1.mrna1;geneID=comp160213_c2_seq1.path1;Name=comp160213_c2_seq1;Dir=indeterminatecoverage=99.5;identity=99.4;matches=2546;mismatches=4;indels=11;unknowns=0;Target=comp160213_c2_seq1 2573 13 .;CDS_Target=comp160213_c2_seq1 2020 1781 .;locus=RLOC_00018147
Chr2	stalkie_big_nohaplotig	exon	67299239	67301788	99	-	.	Parent=comp160213_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67299792	67300031	.	-	0	Parent=comp160213_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67307984	67308605	.	-	.	ID=comp147262_c0_seq1.mrna1;geneID=comp147262_c0_seq1.path1;Name=comp147262_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=527;mismatches=1;indels=0;unknowns=0;Target=comp147262_c0_seq1 88 195 +;locus=RLOC_00018147
Chr2	stalkie_big_nohaplotig	exon	67307984	67308007	100	-	.	Parent=comp147262_c0_seq1.mrna1;Target=comp147262_c0_seq1 505 528 +
Chr2	stalkie_big_nohaplotig	exon	67308102	67308605	99	-	.	Parent=comp147262_c0_seq1.mrna1;Target=comp147262_c0_seq1 1 504 +
Chr2	stalkie_big_nohaplotig	CDS	67308411	67308518	.	-	0	Parent=comp147262_c0_seq1.mrna1
Chr2	gffcl	locus	67159533	67232928	.	+	.	ID=RLOC_00018148;geneIDs=comp162795_c0_seq1.path1;transcripts=comp162795_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67159533	67232928	.	+	.	ID=comp162795_c0_seq1.mrna1;geneID=comp162795_c0_seq1.path1;Name=comp162795_c0_seq1;Dir=indeterminatecoverage=86.0;identity=92.3;matches=1753;mismatches=79;indels=67;unknowns=0;Target=comp162795_c0_seq1 1186 995 .;locus=RLOC_00018148
Chr2	stalkie_big_nohaplotig	exon	67159533	67159541	100	+	.	Parent=comp162795_c0_seq1.mrna1;Target=comp162795_c0_seq1 320 312 .
Chr2	stalkie_big_nohaplotig	exon	67160305	67160311	100	+	.	Parent=comp162795_c0_seq1.mrna1;Target=comp162795_c0_seq1 327 321 .
Chr2	stalkie_big_nohaplotig	exon	67160327	67160366	60	+	.	Parent=comp162795_c0_seq1.mrna1;Target=comp162795_c0_seq1 410 372 .
Chr2	stalkie_big_nohaplotig	exon	67167839	67167850	83	+	.	Parent=comp162795_c0_seq1.mrna1;Target=comp162795_c0_seq1 421 411 .
Chr2	stalkie_big_nohaplotig	exon	67172378	67172383	100	+	.	Parent=comp162795_c0_seq1.mrna1;Target=comp162795_c0_seq1 427 422 .
Chr2	stalkie_big_nohaplotig	exon	67180571	67180575	100	+	.	Parent=comp162795_c0_seq1.mrna1;Target=comp162795_c0_seq1 432 428 .
Chr2	stalkie_big_nohaplotig	exon	67182547	67182557	90	+	.	Parent=comp162795_c0_seq1.mrna1;Target=comp162795_c0_seq1 443 433 .
Chr2	stalkie_big_nohaplotig	exon	67185971	67185981	100	+	.	Parent=comp162795_c0_seq1.mrna1;Target=comp162795_c0_seq1 454 444 .
Chr2	stalkie_big_nohaplotig	exon	67189752	67189760	88	+	.	Parent=comp162795_c0_seq1.mrna1;Target=comp162795_c0_seq1 463 455 .
Chr2	stalkie_big_nohaplotig	exon	67190969	67191000	56	+	.	Parent=comp162795_c0_seq1.mrna1;Target=comp162795_c0_seq1 513 464 .
Chr2	stalkie_big_nohaplotig	exon	67203344	67203405	43	+	.	Parent=comp162795_c0_seq1.mrna1;Target=comp162795_c0_seq1 566 514 .
Chr2	stalkie_big_nohaplotig	exon	67208747	67208782	54	+	.	Parent=comp162795_c0_seq1.mrna1;Target=comp162795_c0_seq1 593 567 .
Chr2	stalkie_big_nohaplotig	exon	67215255	67215256	100	+	.	Parent=comp162795_c0_seq1.mrna1;Target=comp162795_c0_seq1 595 594 .
Chr2	stalkie_big_nohaplotig	exon	67217484	67217486	100	+	.	Parent=comp162795_c0_seq1.mrna1;Target=comp162795_c0_seq1 598 596 .
Chr2	stalkie_big_nohaplotig	exon	67225326	67225396	54	+	.	Parent=comp162795_c0_seq1.mrna1;Target=comp162795_c0_seq1 675 599 .
Chr2	stalkie_big_nohaplotig	exon	67231386	67232928	99	+	.	Parent=comp162795_c0_seq1.mrna1;Target=comp162795_c0_seq1 2227 676 .
Chr2	stalkie_big_nohaplotig	CDS	67231698	67231889	.	+	0	Parent=comp162795_c0_seq1.mrna1
Chr2	gffcl	locus	67178700	67179730	.	+	.	ID=RLOC_00018149;geneIDs=ORF1657.path1;transcripts=ORF1657.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67178700	67179730	.	+	.	ID=ORF1657.mrna1;geneID=ORF1657.path1;Name=ORF1657;Dir=indeterminatecoverage=99.6;identity=100.0;matches=1031;mismatches=0;indels=0;unknowns=0;Target=ORF1657 1035 5 .;CDS_Target=ORF1657 1035 7 .;locus=RLOC_00018149
Chr2	stalkie_big_nohaplotig	exon	67178700	67179730	100	+	.	Parent=ORF1657.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67178702	67179730	.	+	0	Parent=ORF1657.mrna1
Chr2	gffcl	locus	67212463	67212983	.	-	.	ID=RLOC_00018150;geneIDs=comp143454_c0_seq1.path2;transcripts=comp143454_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	67212463	67212983	.	-	.	ID=comp143454_c0_seq1.mrna2;geneID=comp143454_c0_seq1.path2;Name=comp143454_c0_seq1;Dir=indeterminatecoverage=69.4;identity=91.2;matches=425;mismatches=22;indels=19;unknowns=0;locus=RLOC_00018150
Chr2	stalkie_big_nohaplotig	exon	67212463	67212892	93	-	.	Parent=comp143454_c0_seq1.mrna2;Target=comp143454_c0_seq1 674 243 .
Chr2	stalkie_big_nohaplotig	exon	67212965	67212983	56	-	.	Parent=comp143454_c0_seq1.mrna2;Target=comp143454_c0_seq1 238 207 .
Chr2	stalkie_big_nohaplotig	CDS	67212889	67212892	.	-	0	Parent=comp143454_c0_seq1.mrna2;Target=comp143454_c0_seq1 246 243 .
Chr2	stalkie_big_nohaplotig	CDS	67212965	67212982	.	-	0	Parent=comp143454_c0_seq1.mrna2;Target=comp143454_c0_seq1 238 208 .
Chr2	gffcl	locus	67212831	67213318	.	+	.	ID=RLOC_00018151;geneIDs=comp146246_c0_seq1.path2;transcripts=comp146246_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	67212831	67213318	.	+	.	ID=comp146246_c0_seq1.mrna2;geneID=comp146246_c0_seq1.path2;Name=comp146246_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=407;mismatches=2;indels=0;unknowns=0;Target=comp146246_c0_seq1 348 407 .;locus=RLOC_00018151
Chr2	stalkie_big_nohaplotig	exon	67212831	67213047	99	+	.	Parent=comp146246_c0_seq1.mrna2;Target=comp146246_c0_seq1 193 409 -
Chr2	stalkie_big_nohaplotig	exon	67213127	67213318	99	+	.	Parent=comp146246_c0_seq1.mrna2;Target=comp146246_c0_seq1 1 192 -
Chr2	stalkie_big_nohaplotig	CDS	67212833	67212892	.	+	0	Parent=comp146246_c0_seq1.mrna2
Chr2	gffcl	locus	67221720	67227064	.	+	.	ID=RLOC_00018152;geneIDs=FBgn0028996.1.path1;transcripts=FBgn0028996.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67221720	67227064	.	+	.	ID=FBgn0028996.1.mrna1;geneID=FBgn0028996.1.path1;Name=FBgn0028996.1;Dir=sensecoverage=100.0;identity=100.0;matches=2876;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018152
Chr2	stalkie_big_nohaplotig	exon	67221720	67224147	99	+	.	Parent=FBgn0028996.1.mrna1;Target=FBgn0028996.1 1 2428 +
Chr2	stalkie_big_nohaplotig	exon	67224205	67224338	100	+	.	Parent=FBgn0028996.1.mrna1;Target=FBgn0028996.1 2429 2562 +
Chr2	stalkie_big_nohaplotig	exon	67226750	67227064	100	+	.	Parent=FBgn0028996.1.mrna1;Target=FBgn0028996.1 2563 2877 +
Chr2	stalkie_big_nohaplotig	CDS	67221720	67224147	.	+	0	Parent=FBgn0028996.1.mrna1;Target=FBgn0028996.1 1 2428 +
Chr2	stalkie_big_nohaplotig	CDS	67224205	67224338	.	+	2	Parent=FBgn0028996.1.mrna1;Target=FBgn0028996.1 2429 2562 +
Chr2	stalkie_big_nohaplotig	CDS	67226750	67227064	.	+	0	Parent=FBgn0028996.1.mrna1;Target=FBgn0028996.1 2563 2877 +
Chr2	gffcl	locus	67228546	67229300	.	+	.	ID=RLOC_00018153;geneIDs=comp152056_c1_seq1.path1;transcripts=comp152056_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67228546	67229300	.	+	.	ID=comp152056_c1_seq1.mrna1;geneID=comp152056_c1_seq1.path1;Name=comp152056_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=755;mismatches=0;indels=0;unknowns=0;Target=comp152056_c1_seq1 755 1 .;CDS_Target=comp152056_c1_seq1 553 377 .;locus=RLOC_00018153
Chr2	stalkie_big_nohaplotig	exon	67228546	67229300	100	+	.	Parent=comp152056_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67228922	67229098	.	+	0	Parent=comp152056_c1_seq1.mrna1
Chr2	gffcl	locus	67230527	67231100	.	-	.	ID=RLOC_00018154;geneIDs=comp152089_c0_seq1.path1;transcripts=comp152089_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67230527	67231100	.	-	.	ID=comp152089_c0_seq1.mrna1;geneID=comp152089_c0_seq1.path1;Name=comp152089_c0_seq1;Dir=indeterminatecoverage=100.0;identity=80.3;matches=552;mismatches=14;indels=121;unknowns=0;Target=comp152089_c0_seq1 679 1 .;CDS_Target=comp152089_c0_seq1 106 2 .;locus=RLOC_00018154
Chr2	stalkie_big_nohaplotig	exon	67230527	67231100	80	-	.	Parent=comp152089_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67230995	67231099	.	-	0	Parent=comp152089_c0_seq1.mrna1
Chr2	gffcl	locus	67235732	67235983	.	+	.	ID=RLOC_00018155;geneIDs=comp149291_c0_seq1.path1;transcripts=comp149291_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67235732	67235983	.	+	.	ID=comp149291_c0_seq1.mrna1;geneID=comp149291_c0_seq1.path1;Name=comp149291_c0_seq1;Dir=indeterminatecoverage=98.8;identity=98.8;matches=249;mismatches=3;indels=0;unknowns=0;Target=comp149291_c0_seq1 254 3 .;CDS_Target=comp149291_c0_seq1 207 166 .;locus=RLOC_00018155
Chr2	stalkie_big_nohaplotig	exon	67235732	67235983	98	+	.	Parent=comp149291_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67235895	67235936	.	+	0	Parent=comp149291_c0_seq1.mrna1
Chr2	gffcl	locus	67236122	67236586	.	-	.	ID=RLOC_00018156;geneIDs=comp142417_c0_seq1.path1;transcripts=comp142417_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67236122	67236586	.	-	.	ID=comp142417_c0_seq1.mrna1;geneID=comp142417_c0_seq1.path1;Name=comp142417_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=465;mismatches=0;indels=0;unknowns=0;Target=comp142417_c0_seq1 465 1 .;CDS_Target=comp142417_c0_seq1 116 3 .;locus=RLOC_00018156
Chr2	stalkie_big_nohaplotig	exon	67236122	67236586	100	-	.	Parent=comp142417_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67236471	67236584	.	-	0	Parent=comp142417_c0_seq1.mrna1
Chr2	gffcl	locus	67244044	67258763	.	.	.	ID=RLOC_00018157;geneIDs=FBgn0250819.1.path1,comp118960_c0_seq1.path1,comp135601_c0_seq1.path1,comp154732_c0_seq1.path1,comp156324_c0_seq1.path1,comp1102920_c0_seq1.path1;transcripts=FBgn0250819.1.mrna1,comp135601_c0_seq1.mrna1,comp118960_c0_seq1.mrna1,comp1102920_c0_seq1.mrna1,comp154732_c0_seq1.mrna1,comp156324_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67244044	67258763	.	+	.	ID=FBgn0250819.1.mrna1;geneID=FBgn0250819.1.path1;Name=FBgn0250819.1;Dir=sensecoverage=97.9;identity=100.0;matches=2390;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018157
Chr2	stalkie_big_nohaplotig	exon	67244044	67244136	100	+	.	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 52 144 +
Chr2	stalkie_big_nohaplotig	exon	67244407	67244430	100	+	.	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 145 168 +
Chr2	stalkie_big_nohaplotig	exon	67244486	67244806	100	+	.	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 169 489 +
Chr2	stalkie_big_nohaplotig	exon	67244876	67244992	100	+	.	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 490 606 +
Chr2	stalkie_big_nohaplotig	exon	67251377	67251427	100	+	.	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 607 657 +
Chr2	stalkie_big_nohaplotig	exon	67254273	67254406	100	+	.	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 658 791 +
Chr2	stalkie_big_nohaplotig	exon	67254468	67254634	100	+	.	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 792 958 +
Chr2	stalkie_big_nohaplotig	exon	67254747	67255226	100	+	.	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 959 1438 +
Chr2	stalkie_big_nohaplotig	exon	67255284	67255457	100	+	.	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 1439 1612 +
Chr2	stalkie_big_nohaplotig	exon	67257503	67257642	100	+	.	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 1613 1752 +
Chr2	stalkie_big_nohaplotig	exon	67257697	67258158	100	+	.	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 1753 2214 +
Chr2	stalkie_big_nohaplotig	exon	67258478	67258623	99	+	.	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 2215 2360 +
Chr2	stalkie_big_nohaplotig	exon	67258682	67258763	100	+	.	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 2361 2442 +
Chr2	stalkie_big_nohaplotig	CDS	67244044	67244136	.	+	0	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 52 144 +
Chr2	stalkie_big_nohaplotig	CDS	67244407	67244430	.	+	0	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 145 168 +
Chr2	stalkie_big_nohaplotig	CDS	67244486	67244806	.	+	0	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 169 489 +
Chr2	stalkie_big_nohaplotig	CDS	67244876	67244992	.	+	0	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 490 606 +
Chr2	stalkie_big_nohaplotig	CDS	67251377	67251427	.	+	0	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 607 657 +
Chr2	stalkie_big_nohaplotig	CDS	67254273	67254406	.	+	0	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 658 791 +
Chr2	stalkie_big_nohaplotig	CDS	67254468	67254634	.	+	1	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 792 958 +
Chr2	stalkie_big_nohaplotig	CDS	67254747	67255226	.	+	2	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 959 1438 +
Chr2	stalkie_big_nohaplotig	CDS	67255284	67255457	.	+	2	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 1439 1612 +
Chr2	stalkie_big_nohaplotig	CDS	67257503	67257642	.	+	2	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 1613 1752 +
Chr2	stalkie_big_nohaplotig	CDS	67257697	67258158	.	+	0	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 1753 2214 +
Chr2	stalkie_big_nohaplotig	CDS	67258478	67258623	.	+	0	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 2215 2360 +
Chr2	stalkie_big_nohaplotig	CDS	67258682	67258763	.	+	1	Parent=FBgn0250819.1.mrna1;Target=FBgn0250819.1 2361 2442 +
Chr2	stalkie_big_nohaplotig	mRNA	67244114	67244428	.	-	.	ID=comp135601_c0_seq1.mrna1;geneID=comp135601_c0_seq1.path1;Name=comp135601_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=315;mismatches=0;indels=0;unknowns=0;Target=comp135601_c0_seq1 315 1 .;CDS_Target=comp135601_c0_seq1 315 220 .;locus=RLOC_00018157
Chr2	stalkie_big_nohaplotig	exon	67244114	67244428	100	-	.	Parent=comp135601_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67244114	67244209	.	-	0	Parent=comp135601_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67244970	67247326	.	+	.	ID=comp118960_c0_seq1.mrna1;geneID=comp118960_c0_seq1.path1;Name=comp118960_c0_seq1;Dir=antisensecoverage=99.1;identity=97.9;matches=329;mismatches=7;indels=0;unknowns=0;locus=RLOC_00018157
Chr2	stalkie_big_nohaplotig	exon	67244970	67244992	100	+	.	Parent=comp118960_c0_seq1.mrna1;Target=comp118960_c0_seq1 317 339 -
Chr2	stalkie_big_nohaplotig	exon	67247014	67247326	97	+	.	Parent=comp118960_c0_seq1.mrna1;Target=comp118960_c0_seq1 4 316 -
Chr2	stalkie_big_nohaplotig	CDS	67244972	67244992	.	+	0	Parent=comp118960_c0_seq1.mrna1;Target=comp118960_c0_seq1 317 337 .
Chr2	stalkie_big_nohaplotig	CDS	67247014	67247088	.	+	0	Parent=comp118960_c0_seq1.mrna1;Target=comp118960_c0_seq1 242 316 .
Chr2	stalkie_big_nohaplotig	mRNA	67251405	67251826	.	-	.	ID=comp1102920_c0_seq1.mrna1;geneID=comp1102920_c0_seq1.path1;Name=comp1102920_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=422;mismatches=0;indels=0;unknowns=0;Target=comp1102920_c0_seq1 422 1 .;CDS_Target=comp1102920_c0_seq1 350 153 .;locus=RLOC_00018157
Chr2	stalkie_big_nohaplotig	exon	67251405	67251826	100	-	.	Parent=comp1102920_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67251477	67251674	.	-	0	Parent=comp1102920_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67255434	67256077	.	+	.	ID=comp154732_c0_seq1.mrna1;geneID=comp154732_c0_seq1.path1;Name=comp154732_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.5;matches=641;mismatches=3;indels=0;unknowns=0;Target=comp154732_c0_seq1 644 1 .;CDS_Target=comp154732_c0_seq1 412 245 .;locus=RLOC_00018157
Chr2	stalkie_big_nohaplotig	exon	67255434	67256077	99	+	.	Parent=comp154732_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67255678	67255845	.	+	0	Parent=comp154732_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67256340	67257523	.	+	.	ID=comp156324_c0_seq1.mrna1;geneID=comp156324_c0_seq1.path1;Name=comp156324_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.0;matches=1021;mismatches=16;indels=26;unknowns=0;Target=comp156324_c0_seq1 669 439 .;locus=RLOC_00018157
Chr2	stalkie_big_nohaplotig	exon	67256340	67256752	97	+	.	Parent=comp156324_c0_seq1.mrna1;Target=comp156324_c0_seq1 415 1 .
Chr2	stalkie_big_nohaplotig	exon	67256895	67257523	95	+	.	Parent=comp156324_c0_seq1.mrna1;Target=comp156324_c0_seq1 1058 416 .
Chr2	stalkie_big_nohaplotig	CDS	67256918	67257148	.	+	0	Parent=comp156324_c0_seq1.mrna1
Chr2	gffcl	locus	67252461	67253848	.	+	.	ID=RLOC_00018158;geneIDs=comp156118_c1_seq1.path1;transcripts=comp156118_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67252461	67253848	.	+	.	ID=comp156118_c1_seq1.mrna1;geneID=comp156118_c1_seq1.path1;Name=comp156118_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1387;mismatches=1;indels=0;unknowns=0;Target=comp156118_c1_seq1 1388 1 .;CDS_Target=comp156118_c1_seq1 824 588 .;locus=RLOC_00018158
Chr2	stalkie_big_nohaplotig	exon	67252461	67253848	99	+	.	Parent=comp156118_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67253048	67253284	.	+	0	Parent=comp156118_c1_seq1.mrna1
Chr2	gffcl	locus	67273796	67274217	.	-	.	ID=RLOC_00018159;geneIDs=comp1102920_c0_seq1.path2;transcripts=comp1102920_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	67273796	67274217	.	-	.	ID=comp1102920_c0_seq1.mrna2;geneID=comp1102920_c0_seq1.path2;Name=comp1102920_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=422;mismatches=0;indels=0;unknowns=0;Target=comp1102920_c0_seq1 422 1 .;CDS_Target=comp1102920_c0_seq1 350 153 .;locus=RLOC_00018159
Chr2	stalkie_big_nohaplotig	exon	67273796	67274217	100	-	.	Parent=comp1102920_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	67273868	67274065	.	-	0	Parent=comp1102920_c0_seq1.mrna2
Chr2	gffcl	locus	67274852	67276239	.	+	.	ID=RLOC_00018160;geneIDs=comp156118_c1_seq1.path2;transcripts=comp156118_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	67274852	67276239	.	+	.	ID=comp156118_c1_seq1.mrna2;geneID=comp156118_c1_seq1.path2;Name=comp156118_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1387;mismatches=1;indels=0;unknowns=0;Target=comp156118_c1_seq1 1388 1 .;CDS_Target=comp156118_c1_seq1 824 588 .;locus=RLOC_00018160
Chr2	stalkie_big_nohaplotig	exon	67274852	67276239	99	+	.	Parent=comp156118_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	67275439	67275675	.	+	0	Parent=comp156118_c1_seq1.mrna2
Chr2	gffcl	locus	67277825	67278468	.	+	.	ID=RLOC_00018161;geneIDs=comp154732_c0_seq1.path2;transcripts=comp154732_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	67277825	67278468	.	+	.	ID=comp154732_c0_seq1.mrna2;geneID=comp154732_c0_seq1.path2;Name=comp154732_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.5;matches=641;mismatches=3;indels=0;unknowns=0;Target=comp154732_c0_seq1 644 1 .;CDS_Target=comp154732_c0_seq1 412 245 .;locus=RLOC_00018161
Chr2	stalkie_big_nohaplotig	exon	67277825	67278468	99	+	.	Parent=comp154732_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	67278069	67278236	.	+	0	Parent=comp154732_c0_seq1.mrna2
Chr2	gffcl	locus	67295019	67295683	.	-	.	ID=RLOC_00018162;geneIDs=comp155418_c0_seq1.path1;transcripts=comp155418_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67295019	67295683	.	-	.	ID=comp155418_c0_seq1.mrna1;geneID=comp155418_c0_seq1.path1;Name=comp155418_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.9;matches=658;mismatches=7;indels=36;unknowns=0;Target=comp155418_c0_seq1 701 1 .;CDS_Target=comp155418_c0_seq1 325 248 .;locus=RLOC_00018162
Chr2	stalkie_big_nohaplotig	exon	67295019	67295683	93	-	.	Parent=comp155418_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67295359	67295436	.	-	0	Parent=comp155418_c0_seq1.mrna1
Chr2	gffcl	locus	67319591	67327937	.	+	.	ID=RLOC_00018163;geneIDs=FBgn0039924.1.path1;transcripts=FBgn0039924.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67319591	67327937	.	+	.	ID=FBgn0039924.1.mrna1;geneID=FBgn0039924.1.path1;Name=FBgn0039924.1;Dir=sensecoverage=100.0;identity=100.0;matches=1236;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018163
Chr2	stalkie_big_nohaplotig	exon	67319591	67319755	100	+	.	Parent=FBgn0039924.1.mrna1;Target=FBgn0039924.1 1 165 +
Chr2	stalkie_big_nohaplotig	exon	67319830	67319927	100	+	.	Parent=FBgn0039924.1.mrna1;Target=FBgn0039924.1 166 263 +
Chr2	stalkie_big_nohaplotig	exon	67319980	67320229	100	+	.	Parent=FBgn0039924.1.mrna1;Target=FBgn0039924.1 264 513 +
Chr2	stalkie_big_nohaplotig	exon	67324688	67324818	100	+	.	Parent=FBgn0039924.1.mrna1;Target=FBgn0039924.1 514 644 +
Chr2	stalkie_big_nohaplotig	exon	67324898	67325066	100	+	.	Parent=FBgn0039924.1.mrna1;Target=FBgn0039924.1 645 813 +
Chr2	stalkie_big_nohaplotig	exon	67325958	67326106	100	+	.	Parent=FBgn0039924.1.mrna1;Target=FBgn0039924.1 814 962 +
Chr2	stalkie_big_nohaplotig	exon	67326167	67326261	100	+	.	Parent=FBgn0039924.1.mrna1;Target=FBgn0039924.1 963 1057 +
Chr2	stalkie_big_nohaplotig	exon	67327706	67327770	100	+	.	Parent=FBgn0039924.1.mrna1;Target=FBgn0039924.1 1058 1122 +
Chr2	stalkie_big_nohaplotig	exon	67327824	67327937	100	+	.	Parent=FBgn0039924.1.mrna1;Target=FBgn0039924.1 1123 1236 +
Chr2	stalkie_big_nohaplotig	CDS	67319591	67319755	.	+	0	Parent=FBgn0039924.1.mrna1;Target=FBgn0039924.1 1 165 +
Chr2	stalkie_big_nohaplotig	CDS	67319830	67319927	.	+	0	Parent=FBgn0039924.1.mrna1;Target=FBgn0039924.1 166 263 +
Chr2	stalkie_big_nohaplotig	CDS	67319980	67320229	.	+	1	Parent=FBgn0039924.1.mrna1;Target=FBgn0039924.1 264 513 +
Chr2	stalkie_big_nohaplotig	CDS	67324688	67324818	.	+	0	Parent=FBgn0039924.1.mrna1;Target=FBgn0039924.1 514 644 +
Chr2	stalkie_big_nohaplotig	CDS	67324898	67325066	.	+	1	Parent=FBgn0039924.1.mrna1;Target=FBgn0039924.1 645 813 +
Chr2	stalkie_big_nohaplotig	CDS	67325958	67326106	.	+	0	Parent=FBgn0039924.1.mrna1;Target=FBgn0039924.1 814 962 +
Chr2	stalkie_big_nohaplotig	CDS	67326167	67326261	.	+	1	Parent=FBgn0039924.1.mrna1;Target=FBgn0039924.1 963 1057 +
Chr2	stalkie_big_nohaplotig	CDS	67327706	67327770	.	+	2	Parent=FBgn0039924.1.mrna1;Target=FBgn0039924.1 1058 1122 +
Chr2	stalkie_big_nohaplotig	CDS	67327824	67327937	.	+	0	Parent=FBgn0039924.1.mrna1;Target=FBgn0039924.1 1123 1236 +
Chr2	gffcl	locus	67323537	67324392	.	-	.	ID=RLOC_00018164;geneIDs=comp150546_c1_seq1.path1;transcripts=comp150546_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67323537	67324392	.	-	.	ID=comp150546_c1_seq1.mrna1;geneID=comp150546_c1_seq1.path1;Name=comp150546_c1_seq1;Dir=indeterminatecoverage=100.0;identity=96.8;matches=839;mismatches=16;indels=12;unknowns=0;Target=comp150546_c1_seq1 866 1 .;CDS_Target=comp150546_c1_seq1 745 632 .;locus=RLOC_00018164
Chr2	stalkie_big_nohaplotig	exon	67323537	67324392	96	-	.	Parent=comp150546_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67323647	67323761	.	-	0	Parent=comp150546_c1_seq1.mrna1
Chr2	gffcl	locus	67343426	67354400	.	+	.	ID=RLOC_00018165;geneIDs=FBgn0026262.1.path1;transcripts=FBgn0026262.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67343426	67354400	.	+	.	ID=FBgn0026262.1.mrna1;geneID=FBgn0026262.1.path1;Name=FBgn0026262.1;Dir=sensecoverage=100.0;identity=99.9;matches=4896;mismatches=6;indels=0;unknowns=0;locus=RLOC_00018165
Chr2	stalkie_big_nohaplotig	exon	67343426	67343594	100	+	.	Parent=FBgn0026262.1.mrna1;Target=FBgn0026262.1 1 169 +
Chr2	stalkie_big_nohaplotig	exon	67344057	67344587	100	+	.	Parent=FBgn0026262.1.mrna1;Target=FBgn0026262.1 170 700 +
Chr2	stalkie_big_nohaplotig	exon	67344674	67346656	99	+	.	Parent=FBgn0026262.1.mrna1;Target=FBgn0026262.1 701 2683 +
Chr2	stalkie_big_nohaplotig	exon	67348785	67350115	99	+	.	Parent=FBgn0026262.1.mrna1;Target=FBgn0026262.1 2684 4014 +
Chr2	stalkie_big_nohaplotig	exon	67352006	67352336	100	+	.	Parent=FBgn0026262.1.mrna1;Target=FBgn0026262.1 4015 4345 +
Chr2	stalkie_big_nohaplotig	exon	67352392	67352726	100	+	.	Parent=FBgn0026262.1.mrna1;Target=FBgn0026262.1 4346 4680 +
Chr2	stalkie_big_nohaplotig	exon	67352781	67352881	100	+	.	Parent=FBgn0026262.1.mrna1;Target=FBgn0026262.1 4681 4781 +
Chr2	stalkie_big_nohaplotig	exon	67354280	67354400	100	+	.	Parent=FBgn0026262.1.mrna1;Target=FBgn0026262.1 4782 4902 +
Chr2	stalkie_big_nohaplotig	CDS	67343426	67343594	.	+	0	Parent=FBgn0026262.1.mrna1;Target=FBgn0026262.1 1 169 +
Chr2	stalkie_big_nohaplotig	CDS	67344057	67344587	.	+	2	Parent=FBgn0026262.1.mrna1;Target=FBgn0026262.1 170 700 +
Chr2	stalkie_big_nohaplotig	CDS	67344674	67346656	.	+	2	Parent=FBgn0026262.1.mrna1;Target=FBgn0026262.1 701 2683 +
Chr2	stalkie_big_nohaplotig	CDS	67348785	67350115	.	+	2	Parent=FBgn0026262.1.mrna1;Target=FBgn0026262.1 2684 4014 +
Chr2	stalkie_big_nohaplotig	CDS	67352006	67352336	.	+	0	Parent=FBgn0026262.1.mrna1;Target=FBgn0026262.1 4015 4345 +
Chr2	stalkie_big_nohaplotig	CDS	67352392	67352726	.	+	2	Parent=FBgn0026262.1.mrna1;Target=FBgn0026262.1 4346 4680 +
Chr2	stalkie_big_nohaplotig	CDS	67352781	67352881	.	+	0	Parent=FBgn0026262.1.mrna1;Target=FBgn0026262.1 4681 4781 +
Chr2	stalkie_big_nohaplotig	CDS	67354280	67354400	.	+	1	Parent=FBgn0026262.1.mrna1;Target=FBgn0026262.1 4782 4902 +
Chr2	gffcl	locus	67353168	67353497	.	+	.	ID=RLOC_00018166;geneIDs=comp142328_c0_seq1.path1;transcripts=comp142328_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67353168	67353497	.	+	.	ID=comp142328_c0_seq1.mrna1;geneID=comp142328_c0_seq1.path1;Name=comp142328_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=330;mismatches=0;indels=0;unknowns=0;Target=comp142328_c0_seq1 330 1 .;CDS_Target=comp142328_c0_seq1 106 2 .;locus=RLOC_00018166
Chr2	stalkie_big_nohaplotig	exon	67353168	67353497	100	+	.	Parent=comp142328_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67353169	67353273	.	+	0	Parent=comp142328_c0_seq1.mrna1
Chr2	gffcl	locus	67353646	67354033	.	+	.	ID=RLOC_00018167;geneIDs=comp145620_c0_seq1.path1;transcripts=comp145620_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67353646	67354033	.	+	.	ID=comp145620_c0_seq1.mrna1;geneID=comp145620_c0_seq1.path1;Name=comp145620_c0_seq1;Dir=indeterminatecoverage=99.5;identity=96.9;matches=376;mismatches=12;indels=0;unknowns=0;Target=comp145620_c0_seq1 390 3 .;CDS_Target=comp145620_c0_seq1 138 61 .;locus=RLOC_00018167
Chr2	stalkie_big_nohaplotig	exon	67353646	67354033	96	+	.	Parent=comp145620_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67353704	67353781	.	+	0	Parent=comp145620_c0_seq1.mrna1
Chr2	gffcl	locus	67355796	67356093	.	+	.	ID=RLOC_00018168;geneIDs=comp117543_c0_seq1.path1;transcripts=comp117543_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67355796	67356093	.	+	.	ID=comp117543_c0_seq1.mrna1;geneID=comp117543_c0_seq1.path1;Name=comp117543_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=296;mismatches=2;indels=0;unknowns=0;Target=comp117543_c0_seq1 298 1 .;CDS_Target=comp117543_c0_seq1 142 2 .;locus=RLOC_00018168
Chr2	stalkie_big_nohaplotig	exon	67355796	67356093	99	+	.	Parent=comp117543_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67355797	67355937	.	+	0	Parent=comp117543_c0_seq1.mrna1
Chr2	gffcl	locus	67366260	67394374	.	.	.	ID=RLOC_00018169;geneIDs=FBgn0016126.1.path1,comp142488_c0_seq1.path1;transcripts=FBgn0016126.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67366260	67393695	.	-	.	ID=FBgn0016126.1.mrna1;geneID=FBgn0016126.1.path1;Name=FBgn0016126.1;Dir=sensecoverage=100.0;identity=100.0;matches=1365;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018169
Chr2	stalkie_big_nohaplotig	exon	67366260	67366586	100	-	.	Parent=FBgn0016126.1.mrna1;Target=FBgn0016126.1 1039 1365 +
Chr2	stalkie_big_nohaplotig	exon	67371385	67371472	100	-	.	Parent=FBgn0016126.1.mrna1;Target=FBgn0016126.1 951 1038 +
Chr2	stalkie_big_nohaplotig	exon	67371530	67371656	100	-	.	Parent=FBgn0016126.1.mrna1;Target=FBgn0016126.1 824 950 +
Chr2	stalkie_big_nohaplotig	exon	67375556	67375820	100	-	.	Parent=FBgn0016126.1.mrna1;Target=FBgn0016126.1 559 823 +
Chr2	stalkie_big_nohaplotig	exon	67383058	67383196	100	-	.	Parent=FBgn0016126.1.mrna1;Target=FBgn0016126.1 420 558 +
Chr2	stalkie_big_nohaplotig	exon	67383302	67383376	100	-	.	Parent=FBgn0016126.1.mrna1;Target=FBgn0016126.1 345 419 +
Chr2	stalkie_big_nohaplotig	exon	67383641	67383685	100	-	.	Parent=FBgn0016126.1.mrna1;Target=FBgn0016126.1 300 344 +
Chr2	stalkie_big_nohaplotig	exon	67389350	67389484	100	-	.	Parent=FBgn0016126.1.mrna1;Target=FBgn0016126.1 165 299 +
Chr2	stalkie_big_nohaplotig	exon	67393532	67393695	100	-	.	Parent=FBgn0016126.1.mrna1;Target=FBgn0016126.1 1 164 +
Chr2	stalkie_big_nohaplotig	CDS	67366260	67366586	.	-	0	Parent=FBgn0016126.1.mrna1;Target=FBgn0016126.1 1039 1365 +
Chr2	stalkie_big_nohaplotig	CDS	67371385	67371472	.	-	1	Parent=FBgn0016126.1.mrna1;Target=FBgn0016126.1 951 1038 +
Chr2	stalkie_big_nohaplotig	CDS	67371530	67371656	.	-	2	Parent=FBgn0016126.1.mrna1;Target=FBgn0016126.1 824 950 +
Chr2	stalkie_big_nohaplotig	CDS	67375556	67375820	.	-	0	Parent=FBgn0016126.1.mrna1;Target=FBgn0016126.1 559 823 +
Chr2	stalkie_big_nohaplotig	CDS	67383058	67383196	.	-	1	Parent=FBgn0016126.1.mrna1;Target=FBgn0016126.1 420 558 +
Chr2	stalkie_big_nohaplotig	CDS	67383302	67383376	.	-	1	Parent=FBgn0016126.1.mrna1;Target=FBgn0016126.1 345 419 +
Chr2	stalkie_big_nohaplotig	CDS	67383641	67383685	.	-	1	Parent=FBgn0016126.1.mrna1;Target=FBgn0016126.1 300 344 +
Chr2	stalkie_big_nohaplotig	CDS	67389350	67389484	.	-	1	Parent=FBgn0016126.1.mrna1;Target=FBgn0016126.1 165 299 +
Chr2	stalkie_big_nohaplotig	CDS	67393532	67393695	.	-	0	Parent=FBgn0016126.1.mrna1;Target=FBgn0016126.1 1 164 +
Chr2	gffcl	locus	67377844	67378797	.	-	.	ID=RLOC_00018170;geneIDs=comp119285_c0_seq1.path1;transcripts=comp119285_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67377844	67378797	.	-	.	ID=comp119285_c0_seq1.mrna1;geneID=comp119285_c0_seq1.path1;Name=comp119285_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=954;mismatches=0;indels=0;unknowns=0;Target=comp119285_c0_seq1 957 4 .;CDS_Target=comp119285_c0_seq1 567 304 .;locus=RLOC_00018170
Chr2	stalkie_big_nohaplotig	exon	67377844	67378797	100	-	.	Parent=comp119285_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67378234	67378497	.	-	0	Parent=comp119285_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67384078	69106581	.	+	.	ID=comp156315_c0_seq1.mrna1;geneID=comp156315_c0_seq1.path1;Name=comp156315_c0_seq1;Dir=sensecoverage=88.1;identity=92.8;matches=1598;mismatches=81;indels=43;unknowns=0;Target=comp156315_c0_seq1 428 583 +;locus=RLOC_00018171
Chr2	stalkie_big_nohaplotig	exon	67384078	67385297	99	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1 1220 +
Chr2	stalkie_big_nohaplotig	exon	67405216	67405255	54	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1251 1296 +
Chr2	stalkie_big_nohaplotig	exon	67405326	67405338	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1297 1309 +
Chr2	stalkie_big_nohaplotig	exon	67405571	67405573	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1310 1312 +
Chr2	stalkie_big_nohaplotig	exon	67409767	67409773	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1313 1319 +
Chr2	stalkie_big_nohaplotig	exon	67413606	67413617	75	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1320 1331 +
Chr2	stalkie_big_nohaplotig	exon	67418943	67418980	47	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1332 1367 +
Chr2	stalkie_big_nohaplotig	exon	67419633	67419639	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1368 1374 +
Chr2	stalkie_big_nohaplotig	exon	68292793	68292800	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1476 1483 +
Chr2	stalkie_big_nohaplotig	exon	68298745	68298746	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1484 1485 +
Chr2	stalkie_big_nohaplotig	exon	68305674	68305683	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1486 1495 +
Chr2	stalkie_big_nohaplotig	exon	68309567	68309577	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1496 1506 +
Chr2	stalkie_big_nohaplotig	exon	68751725	68751729	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1523 1527 +
Chr2	stalkie_big_nohaplotig	exon	68757135	68757142	75	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1528 1535 +
Chr2	stalkie_big_nohaplotig	exon	68763030	68763046	70	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1536 1552 +
Chr2	stalkie_big_nohaplotig	exon	68770206	68770214	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1553 1561 +
Chr2	stalkie_big_nohaplotig	exon	68774093	68774101	88	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1562 1570 +
Chr2	stalkie_big_nohaplotig	exon	68788833	68788838	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1571 1576 +
Chr2	stalkie_big_nohaplotig	exon	68804751	68804755	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1577 1581 +
Chr2	stalkie_big_nohaplotig	exon	68807673	68807682	90	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1582 1591 +
Chr2	stalkie_big_nohaplotig	exon	68839592	68839597	83	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1621 1626 +
Chr2	stalkie_big_nohaplotig	exon	68840153	68840162	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1715 1724 +
Chr2	stalkie_big_nohaplotig	exon	68876592	68876596	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1740 1744 +
Chr2	stalkie_big_nohaplotig	exon	68884067	68884076	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1745 1754 +
Chr2	stalkie_big_nohaplotig	exon	68896484	68896488	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1767 1771 +
Chr2	stalkie_big_nohaplotig	exon	68913483	68913489	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1772 1778 +
Chr2	stalkie_big_nohaplotig	exon	68926220	68926228	88	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1804 1812 +
Chr2	stalkie_big_nohaplotig	exon	68954903	68954911	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1813 1821 +
Chr2	stalkie_big_nohaplotig	exon	68957054	68957056	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1822 1824 +
Chr2	stalkie_big_nohaplotig	exon	68962139	68962144	66	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1825 1830 +
Chr2	stalkie_big_nohaplotig	exon	69007177	69007192	87	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1831 1846 +
Chr2	stalkie_big_nohaplotig	exon	69020142	69020182	58	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1847 1886 +
Chr2	stalkie_big_nohaplotig	exon	69050465	69050472	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 1887 1894 +
Chr2	stalkie_big_nohaplotig	exon	69056077	69056085	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 2004 2012 +
Chr2	stalkie_big_nohaplotig	exon	69061586	69061590	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 2041 2045 +
Chr2	stalkie_big_nohaplotig	exon	69067071	69067115	51	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 2046 2119 +
Chr2	stalkie_big_nohaplotig	exon	69074464	69074478	93	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 2120 2133 +
Chr2	stalkie_big_nohaplotig	exon	69077819	69077825	71	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 2134 2140 +
Chr2	stalkie_big_nohaplotig	exon	69082632	69082638	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 2141 2147 +
Chr2	stalkie_big_nohaplotig	exon	69086485	69086487	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 2148 2150 +
Chr2	stalkie_big_nohaplotig	exon	69106571	69106581	100	+	.	Parent=comp156315_c0_seq1.mrna1;Target=comp156315_c0_seq1 2151 2161 +
Chr2	stalkie_big_nohaplotig	CDS	67384505	67384660	.	+	0	Parent=comp156315_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68456303	69265983	.	-	.	ID=FBgn0025726.1.mrna1;geneID=FBgn0025726.1.path1;Name=FBgn0025726.1;Dir=sensecoverage=75.5;identity=98.3;matches=6308;mismatches=62;indels=47;unknowns=0;locus=RLOC_00018171
Chr2	stalkie_big_nohaplotig	exon	68456303	68456312	100	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 7050 7059 +
Chr2	stalkie_big_nohaplotig	exon	68458292	68458299	100	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 7036 7043 +
Chr2	stalkie_big_nohaplotig	exon	68458483	68458484	100	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 7034 7035 +
Chr2	stalkie_big_nohaplotig	exon	68463069	68463106	53	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6898 6948 +
Chr2	stalkie_big_nohaplotig	exon	68482098	68482107	100	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6879 6888 +
Chr2	stalkie_big_nohaplotig	exon	68482504	68482520	76	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6862 6878 +
Chr2	stalkie_big_nohaplotig	exon	68485213	68485216	75	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6858 6861 +
Chr2	stalkie_big_nohaplotig	exon	68503279	68503288	90	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6848 6857 +
Chr2	stalkie_big_nohaplotig	exon	68514933	68514940	100	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6807 6814 +
Chr2	stalkie_big_nohaplotig	exon	68532180	68532190	100	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6760 6770 +
Chr2	stalkie_big_nohaplotig	exon	68557501	68557509	100	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6751 6759 +
Chr2	stalkie_big_nohaplotig	exon	68584564	68584572	100	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6693 6701 +
Chr2	stalkie_big_nohaplotig	exon	68593425	68593463	48	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6661 6692 +
Chr2	stalkie_big_nohaplotig	exon	68601996	68602006	100	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6650 6660 +
Chr2	stalkie_big_nohaplotig	exon	68607543	68607575	44	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6603 6649 +
Chr2	stalkie_big_nohaplotig	exon	68793960	68793966	100	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6494 6500 +
Chr2	stalkie_big_nohaplotig	exon	68927614	68927620	100	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6487 6493 +
Chr2	stalkie_big_nohaplotig	exon	68936262	68936270	100	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6459 6467 +
Chr2	stalkie_big_nohaplotig	exon	69039497	69039505	100	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6219 6227 +
Chr2	stalkie_big_nohaplotig	exon	69039543	69039550	100	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6166 6173 +
Chr2	stalkie_big_nohaplotig	exon	69046385	69046386	100	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6164 6165 +
Chr2	stalkie_big_nohaplotig	exon	69046434	69046441	100	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6111 6118 +
Chr2	stalkie_big_nohaplotig	exon	69243736	69244001	88	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 5842 6110 +
Chr2	stalkie_big_nohaplotig	exon	69244062	69244136	100	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 5767 5841 +
Chr2	stalkie_big_nohaplotig	exon	69244882	69244890	100	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 5758 5766 +
Chr2	stalkie_big_nohaplotig	exon	69248022	69248153	100	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 5626 5757 +
Chr2	stalkie_big_nohaplotig	exon	69260032	69262283	100	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 3374 5625 +
Chr2	stalkie_big_nohaplotig	exon	69262495	69265834	100	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 34 3373 +
Chr2	stalkie_big_nohaplotig	exon	69265951	69265983	100	-	.	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 1 33 +
Chr2	stalkie_big_nohaplotig	CDS	68456303	68456312	.	-	0	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 7050 7059 +
Chr2	stalkie_big_nohaplotig	CDS	68458292	68458299	.	-	2	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 7036 7043 +
Chr2	stalkie_big_nohaplotig	CDS	68458483	68458484	.	-	1	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 7034 7035 +
Chr2	stalkie_big_nohaplotig	CDS	68463069	68463106	.	-	0	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6898 6948 +
Chr2	stalkie_big_nohaplotig	CDS	68482098	68482107	.	-	1	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6879 6888 +
Chr2	stalkie_big_nohaplotig	CDS	68482504	68482520	.	-	0	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6862 6878 +
Chr2	stalkie_big_nohaplotig	CDS	68485213	68485216	.	-	1	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6858 6861 +
Chr2	stalkie_big_nohaplotig	CDS	68503279	68503288	.	-	2	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6848 6857 +
Chr2	stalkie_big_nohaplotig	CDS	68514933	68514940	.	-	1	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6807 6814 +
Chr2	stalkie_big_nohaplotig	CDS	68532180	68532190	.	-	0	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6760 6770 +
Chr2	stalkie_big_nohaplotig	CDS	68557501	68557509	.	-	0	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6751 6759 +
Chr2	stalkie_big_nohaplotig	CDS	68584564	68584572	.	-	0	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6693 6701 +
Chr2	stalkie_big_nohaplotig	CDS	68593425	68593463	.	-	0	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6661 6692 +
Chr2	stalkie_big_nohaplotig	CDS	68601996	68602006	.	-	2	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6650 6660 +
Chr2	stalkie_big_nohaplotig	CDS	68607543	68607575	.	-	2	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6603 6649 +
Chr2	stalkie_big_nohaplotig	CDS	68793960	68793966	.	-	0	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6494 6500 +
Chr2	stalkie_big_nohaplotig	CDS	68927614	68927620	.	-	1	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6487 6493 +
Chr2	stalkie_big_nohaplotig	CDS	68936262	68936270	.	-	1	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6459 6467 +
Chr2	stalkie_big_nohaplotig	CDS	69039497	69039505	.	-	1	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6219 6227 +
Chr2	stalkie_big_nohaplotig	CDS	69039543	69039550	.	-	0	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6166 6173 +
Chr2	stalkie_big_nohaplotig	CDS	69046385	69046386	.	-	2	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6164 6165 +
Chr2	stalkie_big_nohaplotig	CDS	69046434	69046441	.	-	1	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 6111 6118 +
Chr2	stalkie_big_nohaplotig	CDS	69243736	69244001	.	-	0	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 5842 6110 +
Chr2	stalkie_big_nohaplotig	CDS	69244062	69244136	.	-	0	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 5767 5841 +
Chr2	stalkie_big_nohaplotig	CDS	69244882	69244890	.	-	0	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 5758 5766 +
Chr2	stalkie_big_nohaplotig	CDS	69248022	69248153	.	-	0	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 5626 5757 +
Chr2	stalkie_big_nohaplotig	CDS	69260032	69262283	.	-	2	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 3374 5625 +
Chr2	stalkie_big_nohaplotig	CDS	69262495	69265834	.	-	0	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 34 3373 +
Chr2	stalkie_big_nohaplotig	CDS	69265951	69265983	.	-	0	Parent=FBgn0025726.1.mrna1;Target=FBgn0025726.1 1 33 +
Chr2	stalkie_big_nohaplotig	mRNA	68600857	68623979	.	-	.	ID=FBgn0263112.1.mrna1;geneID=FBgn0263112.1.path1;Name=FBgn0263112.1;Dir=sensecoverage=100.0;identity=99.8;matches=2315;mismatches=4;indels=0;unknowns=0;locus=RLOC_00018171
Chr2	stalkie_big_nohaplotig	exon	68600857	68601468	100	-	.	Parent=FBgn0263112.1.mrna1;Target=FBgn0263112.1 1708 2319 +
Chr2	stalkie_big_nohaplotig	exon	68601526	68601690	100	-	.	Parent=FBgn0263112.1.mrna1;Target=FBgn0263112.1 1543 1707 +
Chr2	stalkie_big_nohaplotig	exon	68601759	68602000	100	-	.	Parent=FBgn0263112.1.mrna1;Target=FBgn0263112.1 1301 1542 +
Chr2	stalkie_big_nohaplotig	exon	68602062	68602239	100	-	.	Parent=FBgn0263112.1.mrna1;Target=FBgn0263112.1 1123 1300 +
Chr2	stalkie_big_nohaplotig	exon	68618819	68619184	98	-	.	Parent=FBgn0263112.1.mrna1;Target=FBgn0263112.1 757 1122 +
Chr2	stalkie_big_nohaplotig	exon	68619274	68619393	100	-	.	Parent=FBgn0263112.1.mrna1;Target=FBgn0263112.1 637 756 +
Chr2	stalkie_big_nohaplotig	exon	68619774	68620167	100	-	.	Parent=FBgn0263112.1.mrna1;Target=FBgn0263112.1 243 636 +
Chr2	stalkie_big_nohaplotig	exon	68623738	68623979	100	-	.	Parent=FBgn0263112.1.mrna1;Target=FBgn0263112.1 1 242 +
Chr2	stalkie_big_nohaplotig	CDS	68600857	68601468	.	-	0	Parent=FBgn0263112.1.mrna1;Target=FBgn0263112.1 1708 2319 +
Chr2	stalkie_big_nohaplotig	CDS	68601526	68601690	.	-	0	Parent=FBgn0263112.1.mrna1;Target=FBgn0263112.1 1543 1707 +
Chr2	stalkie_big_nohaplotig	CDS	68601759	68602000	.	-	2	Parent=FBgn0263112.1.mrna1;Target=FBgn0263112.1 1301 1542 +
Chr2	stalkie_big_nohaplotig	CDS	68602062	68602239	.	-	0	Parent=FBgn0263112.1.mrna1;Target=FBgn0263112.1 1123 1300 +
Chr2	stalkie_big_nohaplotig	CDS	68618819	68619184	.	-	0	Parent=FBgn0263112.1.mrna1;Target=FBgn0263112.1 757 1122 +
Chr2	stalkie_big_nohaplotig	CDS	68619274	68619393	.	-	0	Parent=FBgn0263112.1.mrna1;Target=FBgn0263112.1 637 756 +
Chr2	stalkie_big_nohaplotig	CDS	68619774	68620167	.	-	1	Parent=FBgn0263112.1.mrna1;Target=FBgn0263112.1 243 636 +
Chr2	stalkie_big_nohaplotig	CDS	68623738	68623979	.	-	0	Parent=FBgn0263112.1.mrna1;Target=FBgn0263112.1 1 242 +
Chr2	stalkie_big_nohaplotig	mRNA	68774015	68781270	.	+	.	ID=FBgn0036168.1.mrna1;geneID=FBgn0036168.1.path1;Name=FBgn0036168.1;Dir=sensecoverage=100.0;identity=99.3;matches=2032;mismatches=14;indels=0;unknowns=0;locus=RLOC_00018171
Chr2	stalkie_big_nohaplotig	exon	68774015	68774581	100	+	.	Parent=FBgn0036168.1.mrna1;Target=FBgn0036168.1 1 567 +
Chr2	stalkie_big_nohaplotig	exon	68778615	68778821	100	+	.	Parent=FBgn0036168.1.mrna1;Target=FBgn0036168.1 568 774 +
Chr2	stalkie_big_nohaplotig	exon	68779928	68779985	94	+	.	Parent=FBgn0036168.1.mrna1;Target=FBgn0036168.1 775 832 +
Chr2	stalkie_big_nohaplotig	exon	68780057	68781270	99	+	.	Parent=FBgn0036168.1.mrna1;Target=FBgn0036168.1 833 2046 +
Chr2	stalkie_big_nohaplotig	CDS	68774015	68774581	.	+	0	Parent=FBgn0036168.1.mrna1;Target=FBgn0036168.1 1 567 +
Chr2	stalkie_big_nohaplotig	CDS	68778615	68778821	.	+	0	Parent=FBgn0036168.1.mrna1;Target=FBgn0036168.1 568 774 +
Chr2	stalkie_big_nohaplotig	CDS	68779928	68779985	.	+	0	Parent=FBgn0036168.1.mrna1;Target=FBgn0036168.1 775 832 +
Chr2	stalkie_big_nohaplotig	CDS	68780057	68781270	.	+	2	Parent=FBgn0036168.1.mrna1;Target=FBgn0036168.1 833 2046 +
Chr2	stalkie_big_nohaplotig	mRNA	68955862	68957641	.	-	.	ID=comp154057_c0_seq1.mrna1;geneID=comp154057_c0_seq1.path1;Name=comp154057_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1778;mismatches=2;indels=0;unknowns=0;Target=comp154057_c0_seq1 1780 1 .;CDS_Target=comp154057_c0_seq1 404 204 .;locus=RLOC_00018171
Chr2	stalkie_big_nohaplotig	exon	68955862	68957641	99	-	.	Parent=comp154057_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68957238	68957438	.	-	0	Parent=comp154057_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69032244	69266975	.	-	.	ID=comp160331_c1_seq1.mrna1;geneID=comp160331_c1_seq1.path1;Name=comp160331_c1_seq1;Dir=antisensecoverage=64.8;identity=98.6;matches=6769;mismatches=65;indels=33;unknowns=0;locus=RLOC_00018171
Chr2	stalkie_big_nohaplotig	exon	69032244	69032249	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 3789 3794 -
Chr2	stalkie_big_nohaplotig	exon	69038885	69038886	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 3795 3796 -
Chr2	stalkie_big_nohaplotig	exon	69039048	69039050	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 3797 3799 -
Chr2	stalkie_big_nohaplotig	exon	69044228	69044229	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 3800 3801 -
Chr2	stalkie_big_nohaplotig	exon	69056976	69056978	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 3802 3804 -
Chr2	stalkie_big_nohaplotig	exon	69062683	69062684	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 3805 3806 -
Chr2	stalkie_big_nohaplotig	exon	69066307	69066314	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 3807 3814 -
Chr2	stalkie_big_nohaplotig	exon	69073940	69073942	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 3815 3817 -
Chr2	stalkie_big_nohaplotig	exon	69075618	69075623	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 3818 3823 -
Chr2	stalkie_big_nohaplotig	exon	69079196	69079202	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 3824 3830 -
Chr2	stalkie_big_nohaplotig	exon	69079205	69079208	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 3861 3864 -
Chr2	stalkie_big_nohaplotig	exon	69079341	69079347	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 3865 3871 -
Chr2	stalkie_big_nohaplotig	exon	69079508	69079513	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 3872 3877 -
Chr2	stalkie_big_nohaplotig	exon	69080154	69080158	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 3878 3882 -
Chr2	stalkie_big_nohaplotig	exon	69080178	69080182	60	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 3942 3944 -
Chr2	stalkie_big_nohaplotig	exon	69093502	69093533	62	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 3945 3981 -
Chr2	stalkie_big_nohaplotig	exon	69095611	69095612	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 3982 3983 -
Chr2	stalkie_big_nohaplotig	exon	69099769	69099771	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 3984 3986 -
Chr2	stalkie_big_nohaplotig	exon	69103091	69103097	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 3987 3993 -
Chr2	stalkie_big_nohaplotig	exon	69114544	69114545	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 3994 3995 -
Chr2	stalkie_big_nohaplotig	exon	69117609	69117626	83	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 3996 4011 -
Chr2	stalkie_big_nohaplotig	exon	69120028	69120038	90	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4012 4022 -
Chr2	stalkie_big_nohaplotig	exon	69126602	69126612	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4023 4033 -
Chr2	stalkie_big_nohaplotig	exon	69131344	69131351	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4047 4054 -
Chr2	stalkie_big_nohaplotig	exon	69138244	69138257	73	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4055 4069 -
Chr2	stalkie_big_nohaplotig	exon	69142946	69142957	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4070 4081 -
Chr2	stalkie_big_nohaplotig	exon	69143759	69143763	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4082 4086 -
Chr2	stalkie_big_nohaplotig	exon	69145525	69145531	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4087 4093 -
Chr2	stalkie_big_nohaplotig	exon	69149200	69149204	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4094 4098 -
Chr2	stalkie_big_nohaplotig	exon	69155909	69155911	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4099 4101 -
Chr2	stalkie_big_nohaplotig	exon	69162862	69162864	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4102 4104 -
Chr2	stalkie_big_nohaplotig	exon	69168664	69168673	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4105 4114 -
Chr2	stalkie_big_nohaplotig	exon	69172539	69172560	65	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4115 4146 -
Chr2	stalkie_big_nohaplotig	exon	69194393	69194396	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4147 4150 -
Chr2	stalkie_big_nohaplotig	exon	69200199	69200207	66	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4151 4159 -
Chr2	stalkie_big_nohaplotig	exon	69208123	69208129	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4160 4166 -
Chr2	stalkie_big_nohaplotig	exon	69212688	69212695	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4178 4185 -
Chr2	stalkie_big_nohaplotig	exon	69224658	69224710	50	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4195 4241 -
Chr2	stalkie_big_nohaplotig	exon	69233559	69233565	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4242 4248 -
Chr2	stalkie_big_nohaplotig	exon	69243728	69244001	88	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4249 4525 -
Chr2	stalkie_big_nohaplotig	exon	69244062	69244136	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4526 4600 -
Chr2	stalkie_big_nohaplotig	exon	69244882	69244890	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4601 4609 -
Chr2	stalkie_big_nohaplotig	exon	69248022	69248153	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4610 4741 -
Chr2	stalkie_big_nohaplotig	exon	69260032	69262283	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4742 6993 -
Chr2	stalkie_big_nohaplotig	exon	69262495	69265834	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 6994 10333 -
Chr2	stalkie_big_nohaplotig	exon	69265951	69266202	100	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 10334 10585 -
Chr2	stalkie_big_nohaplotig	exon	69266799	69266975	99	-	.	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 10586 10762 -
Chr2	stalkie_big_nohaplotig	CDS	69212691	69212695	.	-	2	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4181 4185 .
Chr2	stalkie_big_nohaplotig	CDS	69224658	69224710	.	-	1	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4195 4241 .
Chr2	stalkie_big_nohaplotig	CDS	69233559	69233565	.	-	2	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4242 4248 .
Chr2	stalkie_big_nohaplotig	CDS	69243728	69244001	.	-	0	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4249 4525 .
Chr2	stalkie_big_nohaplotig	CDS	69244062	69244136	.	-	0	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4526 4600 .
Chr2	stalkie_big_nohaplotig	CDS	69244882	69244890	.	-	0	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4601 4609 .
Chr2	stalkie_big_nohaplotig	CDS	69248022	69248153	.	-	0	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4610 4741 .
Chr2	stalkie_big_nohaplotig	CDS	69260032	69262283	.	-	2	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 4742 6993 .
Chr2	stalkie_big_nohaplotig	CDS	69262495	69265834	.	-	0	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 6994 10333 .
Chr2	stalkie_big_nohaplotig	CDS	69265951	69265956	.	-	0	Parent=comp160331_c1_seq1.mrna1;Target=comp160331_c1_seq1 10334 10339 .
Chr2	stalkie_big_nohaplotig	mRNA	69033036	69102829	.	-	.	ID=FBgn0005666.1.mrna1;geneID=FBgn0005666.1.path1;Name=FBgn0005666.1;Dir=sensecoverage=99.9;identity=100.0;matches=23316;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018171
Chr2	stalkie_big_nohaplotig	exon	69033036	69033670	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 22682 23316 +
Chr2	stalkie_big_nohaplotig	exon	69033739	69038643	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 17777 22681 +
Chr2	stalkie_big_nohaplotig	exon	69040671	69045245	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 13202 17776 +
Chr2	stalkie_big_nohaplotig	exon	69045304	69045603	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 12902 13201 +
Chr2	stalkie_big_nohaplotig	exon	69045667	69045948	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 12620 12901 +
Chr2	stalkie_big_nohaplotig	exon	69046452	69049121	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 9950 12619 +
Chr2	stalkie_big_nohaplotig	exon	69049194	69050084	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 9059 9949 +
Chr2	stalkie_big_nohaplotig	exon	69050253	69050388	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 8923 9058 +
Chr2	stalkie_big_nohaplotig	exon	69050516	69051279	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 8159 8922 +
Chr2	stalkie_big_nohaplotig	exon	69051349	69052248	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 7259 8158 +
Chr2	stalkie_big_nohaplotig	exon	69053043	69054755	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 5546 7258 +
Chr2	stalkie_big_nohaplotig	exon	69054842	69055195	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 5192 5545 +
Chr2	stalkie_big_nohaplotig	exon	69055361	69056060	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 4492 5191 +
Chr2	stalkie_big_nohaplotig	exon	69058726	69058851	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 4366 4491 +
Chr2	stalkie_big_nohaplotig	exon	69062311	69062684	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 3992 4365 +
Chr2	stalkie_big_nohaplotig	exon	69065337	69065484	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 3844 3991 +
Chr2	stalkie_big_nohaplotig	exon	69069589	69069621	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 3811 3843 +
Chr2	stalkie_big_nohaplotig	exon	69071819	69071992	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 3637 3810 +
Chr2	stalkie_big_nohaplotig	exon	69077601	69077726	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 3511 3636 +
Chr2	stalkie_big_nohaplotig	exon	69081267	69081581	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 3196 3510 +
Chr2	stalkie_big_nohaplotig	exon	69082008	69082106	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 3097 3195 +
Chr2	stalkie_big_nohaplotig	exon	69083583	69083642	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 3037 3096 +
Chr2	stalkie_big_nohaplotig	exon	69083766	69083888	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 2914 3036 +
Chr2	stalkie_big_nohaplotig	exon	69086036	69086080	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 2869 2913 +
Chr2	stalkie_big_nohaplotig	exon	69086369	69086650	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 2587 2868 +
Chr2	stalkie_big_nohaplotig	exon	69087899	69088569	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 1916 2586 +
Chr2	stalkie_big_nohaplotig	exon	69088672	69089074	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 1513 1915 +
Chr2	stalkie_big_nohaplotig	exon	69089133	69089356	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 1289 1512 +
Chr2	stalkie_big_nohaplotig	exon	69095392	69095693	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 987 1288 +
Chr2	stalkie_big_nohaplotig	exon	69096087	69096287	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 786 986 +
Chr2	stalkie_big_nohaplotig	exon	69096652	69096787	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 650 785 +
Chr2	stalkie_big_nohaplotig	exon	69097956	69098097	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 508 649 +
Chr2	stalkie_big_nohaplotig	exon	69098157	69098319	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 345 507 +
Chr2	stalkie_big_nohaplotig	exon	69101943	69101964	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 323 344 +
Chr2	stalkie_big_nohaplotig	exon	69102508	69102829	100	-	.	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 1 322 +
Chr2	stalkie_big_nohaplotig	CDS	69033036	69033670	.	-	2	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 22682 23316 +
Chr2	stalkie_big_nohaplotig	CDS	69033739	69038643	.	-	2	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 17777 22681 +
Chr2	stalkie_big_nohaplotig	CDS	69040671	69045245	.	-	2	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 13202 17776 +
Chr2	stalkie_big_nohaplotig	CDS	69045304	69045603	.	-	2	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 12902 13201 +
Chr2	stalkie_big_nohaplotig	CDS	69045667	69045948	.	-	2	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 12620 12901 +
Chr2	stalkie_big_nohaplotig	CDS	69046452	69049121	.	-	2	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 9950 12619 +
Chr2	stalkie_big_nohaplotig	CDS	69049194	69050084	.	-	2	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 9059 9949 +
Chr2	stalkie_big_nohaplotig	CDS	69050253	69050388	.	-	0	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 8923 9058 +
Chr2	stalkie_big_nohaplotig	CDS	69050516	69051279	.	-	2	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 8159 8922 +
Chr2	stalkie_big_nohaplotig	CDS	69051349	69052248	.	-	2	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 7259 8158 +
Chr2	stalkie_big_nohaplotig	CDS	69053043	69054755	.	-	2	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 5546 7258 +
Chr2	stalkie_big_nohaplotig	CDS	69054842	69055195	.	-	2	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 5192 5545 +
Chr2	stalkie_big_nohaplotig	CDS	69055361	69056060	.	-	0	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 4492 5191 +
Chr2	stalkie_big_nohaplotig	CDS	69058726	69058851	.	-	0	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 4366 4491 +
Chr2	stalkie_big_nohaplotig	CDS	69062311	69062684	.	-	2	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 3992 4365 +
Chr2	stalkie_big_nohaplotig	CDS	69065337	69065484	.	-	0	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 3844 3991 +
Chr2	stalkie_big_nohaplotig	CDS	69069589	69069621	.	-	0	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 3811 3843 +
Chr2	stalkie_big_nohaplotig	CDS	69071819	69071992	.	-	0	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 3637 3810 +
Chr2	stalkie_big_nohaplotig	CDS	69077601	69077726	.	-	0	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 3511 3636 +
Chr2	stalkie_big_nohaplotig	CDS	69081267	69081581	.	-	0	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 3196 3510 +
Chr2	stalkie_big_nohaplotig	CDS	69082008	69082106	.	-	0	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 3097 3195 +
Chr2	stalkie_big_nohaplotig	CDS	69083583	69083642	.	-	0	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 3037 3096 +
Chr2	stalkie_big_nohaplotig	CDS	69083766	69083888	.	-	0	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 2914 3036 +
Chr2	stalkie_big_nohaplotig	CDS	69086036	69086080	.	-	0	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 2869 2913 +
Chr2	stalkie_big_nohaplotig	CDS	69086369	69086650	.	-	0	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 2587 2868 +
Chr2	stalkie_big_nohaplotig	CDS	69087899	69088569	.	-	2	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 1916 2586 +
Chr2	stalkie_big_nohaplotig	CDS	69088672	69089074	.	-	0	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 1513 1915 +
Chr2	stalkie_big_nohaplotig	CDS	69089133	69089356	.	-	2	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 1289 1512 +
Chr2	stalkie_big_nohaplotig	CDS	69095392	69095693	.	-	1	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 987 1288 +
Chr2	stalkie_big_nohaplotig	CDS	69096087	69096287	.	-	1	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 786 986 +
Chr2	stalkie_big_nohaplotig	CDS	69096652	69096787	.	-	2	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 650 785 +
Chr2	stalkie_big_nohaplotig	CDS	69097956	69098097	.	-	0	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 508 649 +
Chr2	stalkie_big_nohaplotig	CDS	69098157	69098319	.	-	1	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 345 507 +
Chr2	stalkie_big_nohaplotig	CDS	69101943	69101964	.	-	2	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 323 344 +
Chr2	stalkie_big_nohaplotig	CDS	69102508	69102829	.	-	0	Parent=FBgn0005666.1.mrna1;Target=FBgn0005666.1 1 322 +
Chr2	stalkie_big_nohaplotig	mRNA	69056038	69056849	.	-	.	ID=comp145784_c0_seq1.mrna1;geneID=comp145784_c0_seq1.path1;Name=comp145784_c0_seq1;Dir=indeterminatecoverage=98.7;identity=99.8;matches=811;mismatches=1;indels=1;unknowns=0;Target=comp145784_c0_seq1 824 12 .;CDS_Target=comp145784_c0_seq1 710 615 .;locus=RLOC_00018171
Chr2	stalkie_big_nohaplotig	exon	69056038	69056849	99	-	.	Parent=comp145784_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69056152	69056247	.	-	0	Parent=comp145784_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69056951	69057919	.	-	.	ID=comp98271_c0_seq1.mrna1;geneID=comp98271_c0_seq1.path1;Name=comp98271_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=969;mismatches=0;indels=0;unknowns=0;Target=comp98271_c0_seq1 969 1 .;CDS_Target=comp98271_c0_seq1 710 591 .;locus=RLOC_00018171
Chr2	stalkie_big_nohaplotig	exon	69056951	69057919	100	-	.	Parent=comp98271_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69057210	69057329	.	-	0	Parent=comp98271_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69062664	69064361	.	-	.	ID=comp144808_c0_seq1.mrna1;geneID=comp144808_c0_seq1.path1;Name=comp144808_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1696;mismatches=2;indels=0;unknowns=0;Target=comp144808_c0_seq1 1698 1 .;CDS_Target=comp144808_c0_seq1 124 2 .;locus=RLOC_00018171
Chr2	stalkie_big_nohaplotig	exon	69062664	69064361	99	-	.	Parent=comp144808_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69064238	69064360	.	-	0	Parent=comp144808_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69069600	69070636	.	+	.	ID=comp118426_c0_seq1.mrna1;geneID=comp118426_c0_seq1.path1;Name=comp118426_c0_seq1;Dir=indeterminatecoverage=99.4;identity=100.0;matches=1037;mismatches=0;indels=0;unknowns=0;Target=comp118426_c0_seq1 1037 1 .;CDS_Target=comp118426_c0_seq1 155 3 .;locus=RLOC_00018171
Chr2	stalkie_big_nohaplotig	exon	69069600	69070636	100	+	.	Parent=comp118426_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69069602	69069754	.	+	0	Parent=comp118426_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69083208	69083606	.	-	.	ID=comp41365_c0_seq1.mrna1;geneID=comp41365_c0_seq1.path1;Name=comp41365_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=399;mismatches=0;indels=0;unknowns=0;Target=comp41365_c0_seq1 399 1 .;CDS_Target=comp41365_c0_seq1 255 100 .;locus=RLOC_00018171
Chr2	stalkie_big_nohaplotig	exon	69083208	69083606	100	-	.	Parent=comp41365_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69083352	69083507	.	-	0	Parent=comp41365_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69117054	71057027	.	+	.	ID=comp160689_c7_seq1.mrna1;geneID=comp160689_c7_seq1.path1;Name=comp160689_c7_seq1;Dir=indeterminatecoverage=70.1;identity=85.3;matches=911;mismatches=89;indels=68;unknowns=0;Target=comp160689_c7_seq1 986 930 .;locus=RLOC_00018171
Chr2	stalkie_big_nohaplotig	exon	69117054	69117135	85	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 476 393 .
Chr2	stalkie_big_nohaplotig	exon	69117218	69117889	91	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1157 477 .
Chr2	stalkie_big_nohaplotig	exon	70930304	70930308	100	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1162 1158 .
Chr2	stalkie_big_nohaplotig	exon	70935602	70935606	100	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1167 1163 .
Chr2	stalkie_big_nohaplotig	exon	70940025	70940036	75	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1179 1168 .
Chr2	stalkie_big_nohaplotig	exon	70945745	70945754	100	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1189 1180 .
Chr2	stalkie_big_nohaplotig	exon	70947255	70947262	100	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1197 1190 .
Chr2	stalkie_big_nohaplotig	exon	70950971	70950972	100	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1199 1198 .
Chr2	stalkie_big_nohaplotig	exon	70952939	70952942	100	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1203 1200 .
Chr2	stalkie_big_nohaplotig	exon	70965728	70965740	84	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1216 1204 .
Chr2	stalkie_big_nohaplotig	exon	70968851	70968861	100	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1227 1217 .
Chr2	stalkie_big_nohaplotig	exon	70979260	70979274	93	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1242 1228 .
Chr2	stalkie_big_nohaplotig	exon	70986542	70986564	60	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1268 1255 .
Chr2	stalkie_big_nohaplotig	exon	70989655	70989663	35	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1333 1317 .
Chr2	stalkie_big_nohaplotig	exon	70991371	70991378	100	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1341 1334 .
Chr2	stalkie_big_nohaplotig	exon	70993649	70993652	100	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1345 1342 .
Chr2	stalkie_big_nohaplotig	exon	70998423	70998428	100	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1351 1346 .
Chr2	stalkie_big_nohaplotig	exon	71003137	71003139	100	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1386 1384 .
Chr2	stalkie_big_nohaplotig	exon	71005042	71005044	100	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1389 1387 .
Chr2	stalkie_big_nohaplotig	exon	71010511	71010519	100	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1398 1390 .
Chr2	stalkie_big_nohaplotig	exon	71010536	71010543	100	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1415 1408 .
Chr2	stalkie_big_nohaplotig	exon	71017110	71017119	90	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1478 1469 .
Chr2	stalkie_big_nohaplotig	exon	71020096	71020114	34	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1518 1493 .
Chr2	stalkie_big_nohaplotig	exon	71024192	71024199	100	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1526 1519 .
Chr2	stalkie_big_nohaplotig	exon	71030488	71030499	100	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1538 1527 .
Chr2	stalkie_big_nohaplotig	exon	71051295	71051330	37	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1605 1539 .
Chr2	stalkie_big_nohaplotig	exon	71057018	71057027	100	+	.	Parent=comp160689_c7_seq1.mrna1;Target=comp160689_c7_seq1 1615 1606 .
Chr2	stalkie_big_nohaplotig	CDS	69117670	69117720	.	+	0	Parent=comp160689_c7_seq1.mrna1
Chr2	gffcl	locus	67423972	67425138	.	.	.	ID=RLOC_00018172;geneIDs=FBgn0051997.1.path1,comp147809_c0_seq1.path1;transcripts=FBgn0051997.1.mrna1,comp147809_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67423972	67425138	.	-	.	ID=FBgn0051997.1.mrna1;geneID=FBgn0051997.1.path1;Name=FBgn0051997.1;Dir=sensecoverage=100.0;identity=100.0;matches=471;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018172
Chr2	stalkie_big_nohaplotig	exon	67423972	67424149	100	-	.	Parent=FBgn0051997.1.mrna1;Target=FBgn0051997.1 294 471 +
Chr2	stalkie_big_nohaplotig	exon	67424212	67424332	100	-	.	Parent=FBgn0051997.1.mrna1;Target=FBgn0051997.1 173 293 +
Chr2	stalkie_big_nohaplotig	exon	67424967	67425138	100	-	.	Parent=FBgn0051997.1.mrna1;Target=FBgn0051997.1 1 172 +
Chr2	stalkie_big_nohaplotig	CDS	67423972	67424149	.	-	1	Parent=FBgn0051997.1.mrna1;Target=FBgn0051997.1 294 471 +
Chr2	stalkie_big_nohaplotig	CDS	67424212	67424332	.	-	2	Parent=FBgn0051997.1.mrna1;Target=FBgn0051997.1 173 293 +
Chr2	stalkie_big_nohaplotig	CDS	67424967	67425138	.	-	0	Parent=FBgn0051997.1.mrna1;Target=FBgn0051997.1 1 172 +
Chr2	stalkie_big_nohaplotig	mRNA	67424312	67424990	.	+	.	ID=comp147809_c0_seq1.mrna1;geneID=comp147809_c0_seq1.path1;Name=comp147809_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=675;mismatches=4;indels=8;unknowns=0;Target=comp147809_c0_seq1 687 1 .;CDS_Target=comp147809_c0_seq1 150 1 .;locus=RLOC_00018172
Chr2	stalkie_big_nohaplotig	exon	67424312	67424990	98	+	.	Parent=comp147809_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67424312	67424461	.	+	0	Parent=comp147809_c0_seq1.mrna1
Chr2	gffcl	locus	67441818	67442878	.	+	.	ID=RLOC_00018173;geneIDs=comp152888_c0_seq1.path1,comp152933_c0_seq1.path1;transcripts=comp152888_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67441818	67442421	.	+	.	ID=comp152888_c0_seq1.mrna1;geneID=comp152888_c0_seq1.path1;Name=comp152888_c0_seq1;Dir=indeterminatecoverage=99.8;identity=95.7;matches=585;mismatches=3;indels=23;unknowns=0;Target=comp152888_c0_seq1 595 1 .;CDS_Target=comp152888_c0_seq1 289 191 .;locus=RLOC_00018173
Chr2	stalkie_big_nohaplotig	exon	67441818	67442421	95	+	.	Parent=comp152888_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67442008	67442122	.	+	0	Parent=comp152888_c0_seq1.mrna1
Chr2	gffcl	locus	67443017	67444315	.	-	.	ID=RLOC_00018174;geneIDs=comp161223_c0_seq1.path1;transcripts=comp161223_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67443017	67444315	.	-	.	ID=comp161223_c0_seq1.mrna1;geneID=comp161223_c0_seq1.path1;Name=comp161223_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1294;mismatches=5;indels=0;unknowns=0;Target=comp161223_c0_seq1 1299 1 .;CDS_Target=comp161223_c0_seq1 590 450 .;locus=RLOC_00018174
Chr2	stalkie_big_nohaplotig	exon	67443017	67444315	99	-	.	Parent=comp161223_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67443726	67443866	.	-	0	Parent=comp161223_c0_seq1.mrna1
Chr2	gffcl	locus	67445341	67547144	.	.	.	ID=RLOC_00018175;geneIDs=comp135145_c0_seq1.path1,comp156959_c0_seq1.path1,comp157178_c0_seq1.path1,comp160392_c0_seq1.path1;transcripts=comp160392_c0_seq1.mrna1,comp156959_c0_seq1.mrna1,comp157178_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67445341	67545345	.	+	.	ID=comp160392_c0_seq1.mrna1;geneID=comp160392_c0_seq1.path1;Name=comp160392_c0_seq1;Dir=indeterminatecoverage=54.5;identity=98.8;matches=1541;mismatches=11;indels=7;unknowns=0;Target=comp160392_c0_seq1 1035 802 .;locus=RLOC_00018175
Chr2	stalkie_big_nohaplotig	exon	67445341	67446863	98	+	.	Parent=comp160392_c0_seq1.mrna1;Target=comp160392_c0_seq1 1530 1 .
Chr2	stalkie_big_nohaplotig	exon	67523220	67523222	100	+	.	Parent=comp160392_c0_seq1.mrna1;Target=comp160392_c0_seq1 1533 1531 .
Chr2	stalkie_big_nohaplotig	exon	67529548	67529551	100	+	.	Parent=comp160392_c0_seq1.mrna1;Target=comp160392_c0_seq1 1537 1534 .
Chr2	stalkie_big_nohaplotig	exon	67535773	67535775	100	+	.	Parent=comp160392_c0_seq1.mrna1;Target=comp160392_c0_seq1 1540 1538 .
Chr2	stalkie_big_nohaplotig	exon	67537701	67537705	100	+	.	Parent=comp160392_c0_seq1.mrna1;Target=comp160392_c0_seq1 1545 1541 .
Chr2	stalkie_big_nohaplotig	exon	67539957	67539966	80	+	.	Parent=comp160392_c0_seq1.mrna1;Target=comp160392_c0_seq1 1555 1546 .
Chr2	stalkie_big_nohaplotig	exon	67545342	67545345	100	+	.	Parent=comp160392_c0_seq1.mrna1;Target=comp160392_c0_seq1 1559 1556 .
Chr2	stalkie_big_nohaplotig	CDS	67446135	67446368	.	+	0	Parent=comp160392_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67535760	67537706	.	+	.	ID=comp156959_c0_seq1.mrna1;geneID=comp156959_c0_seq1.path1;Name=comp156959_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.4;matches=1939;mismatches=8;indels=4;unknowns=0;Target=comp156959_c0_seq1 1963 13 .;CDS_Target=comp156959_c0_seq1 489 367 .;locus=RLOC_00018175
Chr2	stalkie_big_nohaplotig	exon	67535760	67537706	99	+	.	Parent=comp156959_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67536114	67536236	.	+	0	Parent=comp156959_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67545017	67546665	.	-	.	ID=comp157178_c0_seq1.mrna1;geneID=comp157178_c0_seq1.path1;Name=comp157178_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=1623;mismatches=5;indels=23;unknowns=0;Target=comp157178_c0_seq1 1630 1 .;CDS_Target=comp157178_c0_seq1 885 712 .;locus=RLOC_00018175
Chr2	stalkie_big_nohaplotig	exon	67545017	67546665	98	-	.	Parent=comp157178_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67545769	67545942	.	-	0	Parent=comp157178_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67454180	67455158	.	-	.	ID=comp158753_c1_seq1.mrna1;geneID=comp158753_c1_seq1.path1;Name=comp158753_c1_seq1;Dir=sensecoverage=99.8;identity=100.0;matches=428;mismatches=0;indels=0;unknowns=0;Target=comp158753_c1_seq1 3 134 +;locus=RLOC_00018176
Chr2	stalkie_big_nohaplotig	exon	67454180	67454202	100	-	.	Parent=comp158753_c1_seq1.mrna1;Target=comp158753_c1_seq1 407 429 +
Chr2	stalkie_big_nohaplotig	exon	67454754	67455158	100	-	.	Parent=comp158753_c1_seq1.mrna1;Target=comp158753_c1_seq1 2 406 +
Chr2	stalkie_big_nohaplotig	CDS	67455026	67455157	.	-	0	Parent=comp158753_c1_seq1.mrna1
Chr2	gffcl	locus	67448123	67448693	.	+	.	ID=RLOC_00018177;geneIDs=comp140755_c0_seq1.path1;transcripts=comp140755_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67448123	67448693	.	+	.	ID=comp140755_c0_seq1.mrna1;geneID=comp140755_c0_seq1.path1;Name=comp140755_c0_seq1;Dir=indeterminatecoverage=99.7;identity=95.5;matches=550;mismatches=20;indels=6;unknowns=0;Target=comp140755_c0_seq1 576 2 .;CDS_Target=comp140755_c0_seq1 116 3 .;locus=RLOC_00018177
Chr2	stalkie_big_nohaplotig	exon	67448123	67448693	95	+	.	Parent=comp140755_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67448124	67448236	.	+	0	Parent=comp140755_c0_seq1.mrna1
Chr2	gffcl	locus	67451539	67452286	.	-	.	ID=RLOC_00018178;geneIDs=comp154163_c0_seq1.path1;transcripts=comp154163_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67451539	67452286	.	-	.	ID=comp154163_c0_seq1.mrna1;geneID=comp154163_c0_seq1.path1;Name=comp154163_c0_seq1;Dir=indeterminatecoverage=79.2;identity=96.5;matches=722;mismatches=26;indels=0;unknowns=0;Target=comp154163_c0_seq1 945 198 .;CDS_Target=comp154163_c0_seq1 579 322 .;locus=RLOC_00018178
Chr2	stalkie_big_nohaplotig	exon	67451539	67452286	96	-	.	Parent=comp154163_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67451905	67452162	.	-	0	Parent=comp154163_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67490675	67493477	.	-	.	ID=comp146280_c0_seq1.mrna1;geneID=comp146280_c0_seq1.path1;Name=comp146280_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2799;mismatches=4;indels=0;unknowns=0;Target=comp146280_c0_seq1 2803 1 .;CDS_Target=comp146280_c0_seq1 2289 2092 .;locus=RLOC_00018179
Chr2	stalkie_big_nohaplotig	exon	67490675	67493477	99	-	.	Parent=comp146280_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67491189	67491386	.	-	0	Parent=comp146280_c0_seq1.mrna1
Chr2	gffcl	locus	67485817	67486181	.	+	.	ID=RLOC_00018180;geneIDs=comp85369_c0_seq1.path1;transcripts=comp85369_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67485817	67486181	.	+	.	ID=comp85369_c0_seq1.mrna1;geneID=comp85369_c0_seq1.path1;Name=comp85369_c0_seq1;Dir=indeterminatecoverage=95.8;identity=99.7;matches=364;mismatches=1;indels=0;unknowns=0;Target=comp85369_c0_seq1 381 17 .;CDS_Target=comp85369_c0_seq1 363 109 .;locus=RLOC_00018180
Chr2	stalkie_big_nohaplotig	exon	67485817	67486181	99	+	.	Parent=comp85369_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67485909	67486163	.	+	0	Parent=comp85369_c0_seq1.mrna1
Chr2	gffcl	locus	67486325	67488232	.	-	.	ID=RLOC_00018181;geneIDs=comp156888_c0_seq1.path1;transcripts=comp156888_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67486325	67488232	.	-	.	ID=comp156888_c0_seq1.mrna1;geneID=comp156888_c0_seq1.path1;Name=comp156888_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1908;mismatches=0;indels=1;unknowns=0;Target=comp156888_c0_seq1 1909 1 .;CDS_Target=comp156888_c0_seq1 1903 1532 .;locus=RLOC_00018181
Chr2	stalkie_big_nohaplotig	exon	67486325	67488232	99	-	.	Parent=comp156888_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67486331	67486702	.	-	0	Parent=comp156888_c0_seq1.mrna1
Chr2	gffcl	locus	67495065	67495579	.	-	.	ID=RLOC_00018182;geneIDs=comp147000_c1_seq1.path1;transcripts=comp147000_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67495065	67495579	.	-	.	ID=comp147000_c1_seq1.mrna1;geneID=comp147000_c1_seq1.path1;Name=comp147000_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=508;mismatches=7;indels=0;unknowns=0;Target=comp147000_c1_seq1 515 1 .;CDS_Target=comp147000_c1_seq1 441 346 .;locus=RLOC_00018182
Chr2	stalkie_big_nohaplotig	exon	67495065	67495579	98	-	.	Parent=comp147000_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67495139	67495234	.	-	0	Parent=comp147000_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67527608	67527847	.	-	.	ID=comp115834_c0_seq1.mrna1;geneID=comp115834_c0_seq1.path1;Name=comp115834_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=239;mismatches=1;indels=0;unknowns=0;Target=comp115834_c0_seq1 240 1 .;CDS_Target=comp115834_c0_seq1 240 184 .;locus=RLOC_00018183
Chr2	stalkie_big_nohaplotig	exon	67527608	67527847	99	-	.	Parent=comp115834_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67527608	67527664	.	-	0	Parent=comp115834_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67533300	67533948	.	+	.	ID=comp147474_c0_seq1.mrna1;geneID=comp147474_c0_seq1.path1;Name=comp147474_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=649;mismatches=0;indels=0;unknowns=0;Target=comp147474_c0_seq1 649 1 .;CDS_Target=comp147474_c0_seq1 486 331 .;locus=RLOC_00018183
Chr2	stalkie_big_nohaplotig	exon	67533300	67533948	100	+	.	Parent=comp147474_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67533630	67533785	.	+	0	Parent=comp147474_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67534501	67535033	.	-	.	ID=comp145445_c0_seq1.mrna1;geneID=comp145445_c0_seq1.path1;Name=comp145445_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=533;mismatches=0;indels=1;unknowns=0;Target=comp145445_c0_seq1 534 1 .;CDS_Target=comp145445_c0_seq1 481 407 .;locus=RLOC_00018183
Chr2	stalkie_big_nohaplotig	exon	67534501	67535033	99	-	.	Parent=comp145445_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67534554	67534627	.	-	0	Parent=comp145445_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67538200	67538508	.	-	.	ID=comp301860_c0_seq1.mrna1;geneID=comp301860_c0_seq1.path1;Name=comp301860_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=309;mismatches=0;indels=0;unknowns=0;Target=comp301860_c0_seq1 309 1 .;CDS_Target=comp301860_c0_seq1 256 182 .;locus=RLOC_00018183
Chr2	stalkie_big_nohaplotig	exon	67538200	67538508	100	-	.	Parent=comp301860_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67538253	67538327	.	-	0	Parent=comp301860_c0_seq1.mrna1
Chr2	gffcl	locus	67535042	67535288	.	-	.	ID=RLOC_00018184;geneIDs=comp411262_c0_seq1.path1;transcripts=comp411262_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67535042	67535288	.	-	.	ID=comp411262_c0_seq1.mrna1;geneID=comp411262_c0_seq1.path1;Name=comp411262_c0_seq1;Dir=indeterminatecoverage=95.0;identity=100.0;matches=247;mismatches=0;indels=0;unknowns=0;Target=comp411262_c0_seq1 260 14 .;CDS_Target=comp411262_c0_seq1 64 14 .;locus=RLOC_00018184
Chr2	stalkie_big_nohaplotig	exon	67535042	67535288	100	-	.	Parent=comp411262_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67535238	67535288	.	-	0	Parent=comp411262_c0_seq1.mrna1
Chr2	gffcl	locus	67540863	67541147	.	+	.	ID=RLOC_00018185;geneIDs=comp78205_c0_seq1.path1;transcripts=comp78205_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67540863	67541147	.	+	.	ID=comp78205_c0_seq1.mrna1;geneID=comp78205_c0_seq1.path1;Name=comp78205_c0_seq1;Dir=indeterminatecoverage=99.3;identity=98.9;matches=282;mismatches=3;indels=0;unknowns=0;Target=comp78205_c0_seq1 287 3 .;CDS_Target=comp78205_c0_seq1 240 88 .;locus=RLOC_00018185
Chr2	stalkie_big_nohaplotig	exon	67540863	67541147	98	+	.	Parent=comp78205_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67540948	67541100	.	+	0	Parent=comp78205_c0_seq1.mrna1
Chr2	gffcl	locus	67554048	67555205	.	-	.	ID=RLOC_00018186;geneIDs=comp112850_c0_seq1.path1;transcripts=comp112850_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67554048	67555205	.	-	.	ID=comp112850_c0_seq1.mrna1;geneID=comp112850_c0_seq1.path1;Name=comp112850_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=1104;mismatches=0;indels=3;unknowns=0;Target=comp112850_c0_seq1 301 447 .;locus=RLOC_00018186
Chr2	stalkie_big_nohaplotig	exon	67554048	67554157	97	-	.	Parent=comp112850_c0_seq1.mrna1;Target=comp112850_c0_seq1 1 113 -
Chr2	stalkie_big_nohaplotig	exon	67554212	67555205	100	-	.	Parent=comp112850_c0_seq1.mrna1;Target=comp112850_c0_seq1 114 1107 -
Chr2	stalkie_big_nohaplotig	CDS	67554399	67554545	.	-	0	Parent=comp112850_c0_seq1.mrna1
Chr2	gffcl	locus	67555269	67555493	.	+	.	ID=RLOC_00018187;geneIDs=comp118234_c0_seq1.path1;transcripts=comp118234_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67555269	67555493	.	+	.	ID=comp118234_c0_seq1.mrna1;geneID=comp118234_c0_seq1.path1;Name=comp118234_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=225;mismatches=0;indels=0;unknowns=0;Target=comp118234_c0_seq1 225 1 .;CDS_Target=comp118234_c0_seq1 134 3 .;locus=RLOC_00018187
Chr2	stalkie_big_nohaplotig	exon	67555269	67555493	100	+	.	Parent=comp118234_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67555271	67555402	.	+	0	Parent=comp118234_c0_seq1.mrna1
Chr2	gffcl	locus	67555781	67567168	.	-	.	ID=RLOC_00018188;geneIDs=FBgn0058263.1.path1;transcripts=FBgn0058263.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67555781	67567168	.	-	.	ID=FBgn0058263.1.mrna1;geneID=FBgn0058263.1.path1;Name=FBgn0058263.1;Dir=sensecoverage=100.0;identity=99.9;matches=1652;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018188
Chr2	stalkie_big_nohaplotig	exon	67555781	67555969	100	-	.	Parent=FBgn0058263.1.mrna1;Target=FBgn0058263.1 1465 1653 +
Chr2	stalkie_big_nohaplotig	exon	67556029	67557096	99	-	.	Parent=FBgn0058263.1.mrna1;Target=FBgn0058263.1 397 1464 +
Chr2	stalkie_big_nohaplotig	exon	67557162	67557397	100	-	.	Parent=FBgn0058263.1.mrna1;Target=FBgn0058263.1 161 396 +
Chr2	stalkie_big_nohaplotig	exon	67567009	67567168	100	-	.	Parent=FBgn0058263.1.mrna1;Target=FBgn0058263.1 1 160 +
Chr2	stalkie_big_nohaplotig	CDS	67555781	67555969	.	-	0	Parent=FBgn0058263.1.mrna1;Target=FBgn0058263.1 1465 1653 +
Chr2	stalkie_big_nohaplotig	CDS	67556029	67557096	.	-	0	Parent=FBgn0058263.1.mrna1;Target=FBgn0058263.1 397 1464 +
Chr2	stalkie_big_nohaplotig	CDS	67557162	67557397	.	-	2	Parent=FBgn0058263.1.mrna1;Target=FBgn0058263.1 161 396 +
Chr2	stalkie_big_nohaplotig	CDS	67567009	67567168	.	-	0	Parent=FBgn0058263.1.mrna1;Target=FBgn0058263.1 1 160 +
Chr2	gffcl	locus	67560584	67568936	.	.	.	ID=RLOC_00018189;geneIDs=comp141000_c0_seq1.path1,comp162808_c0_seq1.path1;transcripts=comp162808_c0_seq1.mrna1,comp141000_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67560584	67568936	.	+	.	ID=comp162808_c0_seq1.mrna1;geneID=comp162808_c0_seq1.path1;Name=comp162808_c0_seq1;Dir=indeterminatecoverage=10.2;identity=85.1;matches=378;mismatches=24;indels=42;unknowns=0;Target=comp162808_c0_seq1 894 808 .;locus=RLOC_00018189
Chr2	stalkie_big_nohaplotig	exon	67560584	67560598	40	+	.	Parent=comp162808_c0_seq1.mrna1;Target=comp162808_c0_seq1 487 482 .
Chr2	stalkie_big_nohaplotig	exon	67560830	67560838	100	+	.	Parent=comp162808_c0_seq1.mrna1;Target=comp162808_c0_seq1 496 488 .
Chr2	stalkie_big_nohaplotig	exon	67565039	67565053	73	+	.	Parent=comp162808_c0_seq1.mrna1;Target=comp162808_c0_seq1 511 497 .
Chr2	stalkie_big_nohaplotig	exon	67565463	67565469	100	+	.	Parent=comp162808_c0_seq1.mrna1;Target=comp162808_c0_seq1 518 512 .
Chr2	stalkie_big_nohaplotig	exon	67567493	67567509	76	+	.	Parent=comp162808_c0_seq1.mrna1;Target=comp162808_c0_seq1 532 519 .
Chr2	stalkie_big_nohaplotig	exon	67568569	67568936	87	+	.	Parent=comp162808_c0_seq1.mrna1;Target=comp162808_c0_seq1 896 533 .
Chr2	stalkie_big_nohaplotig	CDS	67568851	67568934	.	+	0	Parent=comp162808_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67568402	67568611	.	-	.	ID=comp141000_c0_seq1.mrna1;geneID=comp141000_c0_seq1.path1;Name=comp141000_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=210;mismatches=0;indels=0;unknowns=0;Target=comp141000_c0_seq1 210 1 .;CDS_Target=comp141000_c0_seq1 97 2 .;locus=RLOC_00018189
Chr2	stalkie_big_nohaplotig	exon	67568402	67568611	100	-	.	Parent=comp141000_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67568515	67568610	.	-	0	Parent=comp141000_c0_seq1.mrna1
Chr2	gffcl	locus	67562180	68091125	.	+	.	ID=RLOC_00018190;geneIDs=comp149422_c0_seq1.path1;transcripts=comp149422_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67562180	68091125	.	+	.	ID=comp149422_c0_seq1.mrna1;geneID=comp149422_c0_seq1.path1;Name=comp149422_c0_seq1;Dir=antisensecoverage=81.6;identity=98.8;matches=713;mismatches=9;indels=0;unknowns=0;Target=comp149422_c0_seq1 66 218 .;locus=RLOC_00018190
Chr2	stalkie_big_nohaplotig	exon	67562180	67562192	92	+	.	Parent=comp149422_c0_seq1.mrna1;Target=comp149422_c0_seq1 711 723 -
Chr2	stalkie_big_nohaplotig	exon	67578490	67578491	100	+	.	Parent=comp149422_c0_seq1.mrna1;Target=comp149422_c0_seq1 709 710 -
Chr2	stalkie_big_nohaplotig	exon	67582350	67582354	80	+	.	Parent=comp149422_c0_seq1.mrna1;Target=comp149422_c0_seq1 704 708 -
Chr2	stalkie_big_nohaplotig	exon	68090317	68090372	91	+	.	Parent=comp149422_c0_seq1.mrna1;Target=comp149422_c0_seq1 648 703 -
Chr2	stalkie_big_nohaplotig	exon	68090480	68091125	99	+	.	Parent=comp149422_c0_seq1.mrna1;Target=comp149422_c0_seq1 2 647 -
Chr2	stalkie_big_nohaplotig	CDS	68090909	68091061	.	+	0	Parent=comp149422_c0_seq1.mrna1
Chr2	gffcl	locus	67605417	67621668	.	+	.	ID=RLOC_00018192;geneIDs=FBgn0025740.1.path1;transcripts=FBgn0025740.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67605417	67621668	.	+	.	ID=FBgn0025740.1.mrna1;geneID=FBgn0025740.1.path1;Name=FBgn0025740.1;Dir=sensecoverage=100.0;identity=100.0;matches=6198;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018192
Chr2	stalkie_big_nohaplotig	exon	67605417	67606071	99	+	.	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 1 655 +
Chr2	stalkie_big_nohaplotig	exon	67606135	67606898	100	+	.	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 656 1419 +
Chr2	stalkie_big_nohaplotig	exon	67606959	67607261	99	+	.	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 1420 1722 +
Chr2	stalkie_big_nohaplotig	exon	67611004	67611807	100	+	.	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 1723 2526 +
Chr2	stalkie_big_nohaplotig	exon	67611875	67612882	100	+	.	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 2527 3534 +
Chr2	stalkie_big_nohaplotig	exon	67615575	67615737	100	+	.	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 3535 3697 +
Chr2	stalkie_big_nohaplotig	exon	67615796	67616601	100	+	.	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 3698 4503 +
Chr2	stalkie_big_nohaplotig	exon	67616658	67616791	100	+	.	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 4504 4637 +
Chr2	stalkie_big_nohaplotig	exon	67618514	67619211	100	+	.	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 4638 5335 +
Chr2	stalkie_big_nohaplotig	exon	67619267	67619844	100	+	.	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 5336 5913 +
Chr2	stalkie_big_nohaplotig	exon	67619906	67620088	100	+	.	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 5914 6096 +
Chr2	stalkie_big_nohaplotig	exon	67621564	67621668	100	+	.	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 6097 6201 +
Chr2	stalkie_big_nohaplotig	CDS	67605417	67606071	.	+	0	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 1 655 +
Chr2	stalkie_big_nohaplotig	CDS	67606135	67606898	.	+	2	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 656 1419 +
Chr2	stalkie_big_nohaplotig	CDS	67606959	67607261	.	+	0	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 1420 1722 +
Chr2	stalkie_big_nohaplotig	CDS	67611004	67611807	.	+	0	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 1723 2526 +
Chr2	stalkie_big_nohaplotig	CDS	67611875	67612882	.	+	0	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 2527 3534 +
Chr2	stalkie_big_nohaplotig	CDS	67615575	67615737	.	+	0	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 3535 3697 +
Chr2	stalkie_big_nohaplotig	CDS	67615796	67616601	.	+	2	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 3698 4503 +
Chr2	stalkie_big_nohaplotig	CDS	67616658	67616791	.	+	0	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 4504 4637 +
Chr2	stalkie_big_nohaplotig	CDS	67618514	67619211	.	+	1	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 4638 5335 +
Chr2	stalkie_big_nohaplotig	CDS	67619267	67619844	.	+	2	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 5336 5913 +
Chr2	stalkie_big_nohaplotig	CDS	67619906	67620088	.	+	0	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 5914 6096 +
Chr2	stalkie_big_nohaplotig	CDS	67621564	67621668	.	+	0	Parent=FBgn0025740.1.mrna1;Target=FBgn0025740.1 6097 6201 +
Chr2	gffcl	locus	67670303	67671057	.	-	.	ID=RLOC_00018193;geneIDs=comp134316_c1_seq1.path1;transcripts=comp134316_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67670303	67671057	.	-	.	ID=comp134316_c1_seq1.mrna1;geneID=comp134316_c1_seq1.path1;Name=comp134316_c1_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=755;mismatches=0;indels=0;unknowns=0;Target=comp134316_c1_seq1 755 1 .;CDS_Target=comp134316_c1_seq1 606 490 .;locus=RLOC_00018193
Chr2	stalkie_big_nohaplotig	exon	67670303	67671057	100	-	.	Parent=comp134316_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67670452	67670568	.	-	0	Parent=comp134316_c1_seq1.mrna1
Chr2	gffcl	locus	67671252	67682873	.	-	.	ID=RLOC_00018194;geneIDs=FBgn0051992.1.path1;transcripts=FBgn0051992.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67671252	67682873	.	-	.	ID=FBgn0051992.1.mrna1;geneID=FBgn0051992.1.path1;Name=FBgn0051992.1;Dir=sensecoverage=100.0;identity=100.0;matches=4323;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018194
Chr2	stalkie_big_nohaplotig	exon	67671252	67671875	100	-	.	Parent=FBgn0051992.1.mrna1;Target=FBgn0051992.1 3700 4323 +
Chr2	stalkie_big_nohaplotig	exon	67671934	67672213	100	-	.	Parent=FBgn0051992.1.mrna1;Target=FBgn0051992.1 3420 3699 +
Chr2	stalkie_big_nohaplotig	exon	67676129	67676334	100	-	.	Parent=FBgn0051992.1.mrna1;Target=FBgn0051992.1 3214 3419 +
Chr2	stalkie_big_nohaplotig	exon	67676390	67676534	100	-	.	Parent=FBgn0051992.1.mrna1;Target=FBgn0051992.1 3069 3213 +
Chr2	stalkie_big_nohaplotig	exon	67676597	67676781	100	-	.	Parent=FBgn0051992.1.mrna1;Target=FBgn0051992.1 2884 3068 +
Chr2	stalkie_big_nohaplotig	exon	67676846	67677109	100	-	.	Parent=FBgn0051992.1.mrna1;Target=FBgn0051992.1 2620 2883 +
Chr2	stalkie_big_nohaplotig	exon	67677174	67677545	100	-	.	Parent=FBgn0051992.1.mrna1;Target=FBgn0051992.1 2248 2619 +
Chr2	stalkie_big_nohaplotig	exon	67677602	67679082	100	-	.	Parent=FBgn0051992.1.mrna1;Target=FBgn0051992.1 767 2247 +
Chr2	stalkie_big_nohaplotig	exon	67679145	67679805	100	-	.	Parent=FBgn0051992.1.mrna1;Target=FBgn0051992.1 106 766 +
Chr2	stalkie_big_nohaplotig	exon	67682769	67682873	100	-	.	Parent=FBgn0051992.1.mrna1;Target=FBgn0051992.1 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	67671252	67671875	.	-	0	Parent=FBgn0051992.1.mrna1;Target=FBgn0051992.1 3700 4323 +
Chr2	stalkie_big_nohaplotig	CDS	67671934	67672213	.	-	1	Parent=FBgn0051992.1.mrna1;Target=FBgn0051992.1 3420 3699 +
Chr2	stalkie_big_nohaplotig	CDS	67676129	67676334	.	-	0	Parent=FBgn0051992.1.mrna1;Target=FBgn0051992.1 3214 3419 +
Chr2	stalkie_big_nohaplotig	CDS	67676390	67676534	.	-	1	Parent=FBgn0051992.1.mrna1;Target=FBgn0051992.1 3069 3213 +
Chr2	stalkie_big_nohaplotig	CDS	67676597	67676781	.	-	0	Parent=FBgn0051992.1.mrna1;Target=FBgn0051992.1 2884 3068 +
Chr2	stalkie_big_nohaplotig	CDS	67676846	67677109	.	-	0	Parent=FBgn0051992.1.mrna1;Target=FBgn0051992.1 2620 2883 +
Chr2	stalkie_big_nohaplotig	CDS	67677174	67677545	.	-	0	Parent=FBgn0051992.1.mrna1;Target=FBgn0051992.1 2248 2619 +
Chr2	stalkie_big_nohaplotig	CDS	67677602	67679082	.	-	2	Parent=FBgn0051992.1.mrna1;Target=FBgn0051992.1 767 2247 +
Chr2	stalkie_big_nohaplotig	CDS	67679145	67679805	.	-	0	Parent=FBgn0051992.1.mrna1;Target=FBgn0051992.1 106 766 +
Chr2	stalkie_big_nohaplotig	CDS	67682769	67682873	.	-	0	Parent=FBgn0051992.1.mrna1;Target=FBgn0051992.1 1 105 +
Chr2	gffcl	locus	67683035	67691197	.	-	.	ID=RLOC_00018195;geneIDs=comp441092_c0_seq1.path1;transcripts=comp441092_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67683035	67691197	.	-	.	ID=comp441092_c0_seq1.mrna1;geneID=comp441092_c0_seq1.path1;Name=comp441092_c0_seq1;Dir=antisensecoverage=99.6;identity=100.0;matches=234;mismatches=0;indels=0;unknowns=0;Target=comp441092_c0_seq1 178 234 .;locus=RLOC_00018195
Chr2	stalkie_big_nohaplotig	exon	67683035	67683058	100	-	.	Parent=comp441092_c0_seq1.mrna1;Target=comp441092_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	exon	67690988	67691197	100	-	.	Parent=comp441092_c0_seq1.mrna1;Target=comp441092_c0_seq1 25 234 -
Chr2	stalkie_big_nohaplotig	CDS	67691141	67691197	.	-	0	Parent=comp441092_c0_seq1.mrna1
Chr2	gffcl	locus	67727945	67739966	.	-	.	ID=RLOC_00018196;geneIDs=FBgn0004859.1.path1;transcripts=FBgn0004859.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67727945	67739966	.	-	.	ID=FBgn0004859.1.mrna1;geneID=FBgn0004859.1.path1;Name=FBgn0004859.1;Dir=sensecoverage=100.0;identity=99.7;matches=3432;mismatches=8;indels=1;unknowns=0;locus=RLOC_00018196
Chr2	stalkie_big_nohaplotig	exon	67727945	67729737	99	-	.	Parent=FBgn0004859.1.mrna1;Target=FBgn0004859.1 1648 3441 +
Chr2	stalkie_big_nohaplotig	exon	67729805	67729969	100	-	.	Parent=FBgn0004859.1.mrna1;Target=FBgn0004859.1 1483 1647 +
Chr2	stalkie_big_nohaplotig	exon	67730069	67730530	99	-	.	Parent=FBgn0004859.1.mrna1;Target=FBgn0004859.1 1021 1482 +
Chr2	stalkie_big_nohaplotig	exon	67730656	67731272	100	-	.	Parent=FBgn0004859.1.mrna1;Target=FBgn0004859.1 404 1020 +
Chr2	stalkie_big_nohaplotig	exon	67731328	67731674	100	-	.	Parent=FBgn0004859.1.mrna1;Target=FBgn0004859.1 57 403 +
Chr2	stalkie_big_nohaplotig	exon	67739911	67739966	100	-	.	Parent=FBgn0004859.1.mrna1;Target=FBgn0004859.1 1 56 +
Chr2	stalkie_big_nohaplotig	CDS	67727945	67729737	.	-	0	Parent=FBgn0004859.1.mrna1;Target=FBgn0004859.1 1648 3441 +
Chr2	stalkie_big_nohaplotig	CDS	67729805	67729969	.	-	0	Parent=FBgn0004859.1.mrna1;Target=FBgn0004859.1 1483 1647 +
Chr2	stalkie_big_nohaplotig	CDS	67730069	67730530	.	-	0	Parent=FBgn0004859.1.mrna1;Target=FBgn0004859.1 1021 1482 +
Chr2	stalkie_big_nohaplotig	CDS	67730656	67731272	.	-	2	Parent=FBgn0004859.1.mrna1;Target=FBgn0004859.1 404 1020 +
Chr2	stalkie_big_nohaplotig	CDS	67731328	67731674	.	-	1	Parent=FBgn0004859.1.mrna1;Target=FBgn0004859.1 57 403 +
Chr2	stalkie_big_nohaplotig	CDS	67739911	67739966	.	-	0	Parent=FBgn0004859.1.mrna1;Target=FBgn0004859.1 1 56 +
Chr2	gffcl	locus	67746918	68119876	.	-	.	ID=RLOC_00018197;geneIDs=comp76004_c0_seq1.path1;transcripts=comp76004_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67746918	68119876	.	-	.	ID=comp76004_c0_seq1.mrna1;geneID=comp76004_c0_seq1.path1;Name=comp76004_c0_seq1;Dir=indeterminatecoverage=89.3;identity=98.9;matches=370;mismatches=4;indels=0;unknowns=0;Target=comp76004_c0_seq1 314 207 .;locus=RLOC_00018197
Chr2	stalkie_big_nohaplotig	exon	67746918	67747246	99	-	.	Parent=comp76004_c0_seq1.mrna1;Target=comp76004_c0_seq1 419 91 .
Chr2	stalkie_big_nohaplotig	exon	68119832	68119876	97	-	.	Parent=comp76004_c0_seq1.mrna1;Target=comp76004_c0_seq1 90 46 .
Chr2	stalkie_big_nohaplotig	CDS	67747023	67747130	.	-	0	Parent=comp76004_c0_seq1.mrna1
Chr2	gffcl	locus	67769286	67770082	.	+	.	ID=RLOC_00018198;geneIDs=comp163475_c0_seq1.path4;transcripts=comp163475_c0_seq1.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	67769286	67770082	.	+	.	ID=comp163475_c0_seq1.mrna4;geneID=comp163475_c0_seq1.path4;Name=comp163475_c0_seq1;Dir=indeterminatecoverage=62.5;identity=98.0;matches=781;mismatches=13;indels=3;unknowns=0;Target=comp163475_c0_seq1 795 2 .;CDS_Target=comp163475_c0_seq1 330 109 .;locus=RLOC_00018198
Chr2	stalkie_big_nohaplotig	exon	67769286	67770082	97	+	.	Parent=comp163475_c0_seq1.mrna4
Chr2	stalkie_big_nohaplotig	CDS	67769393	67769614	.	+	0	Parent=comp163475_c0_seq1.mrna4
Chr2	gffcl	locus	67782037	67851908	.	+	.	ID=RLOC_00018199;geneIDs=comp998664_c0_seq1.path1;transcripts=comp998664_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67782037	67851908	.	+	.	ID=comp998664_c0_seq1.mrna1;geneID=comp998664_c0_seq1.path1;Name=comp998664_c0_seq1;Dir=indeterminatecoverage=99.9;identity=95.3;matches=1404;mismatches=20;indels=50;unknowns=0;Target=comp998664_c0_seq1 914 699 .;locus=RLOC_00018199
Chr2	stalkie_big_nohaplotig	exon	67782037	67782498	87	+	.	Parent=comp998664_c0_seq1.mrna1;Target=comp998664_c0_seq1 423 1 .
Chr2	stalkie_big_nohaplotig	exon	67850900	67851908	98	+	.	Parent=comp998664_c0_seq1.mrna1;Target=comp998664_c0_seq1 1427 424 .
Chr2	stalkie_big_nohaplotig	CDS	67851175	67851396	.	+	0	Parent=comp998664_c0_seq1.mrna1
Chr2	gffcl	locus	67797544	67798776	.	+	.	ID=RLOC_00018200;geneIDs=comp160644_c0_seq1.path1;transcripts=comp160644_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67797544	67798776	.	+	.	ID=comp160644_c0_seq1.mrna1;geneID=comp160644_c0_seq1.path1;Name=comp160644_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.2;matches=1228;mismatches=5;indels=5;unknowns=0;Target=comp160644_c0_seq1 1238 1 .;CDS_Target=comp160644_c0_seq1 329 228 .;locus=RLOC_00018200
Chr2	stalkie_big_nohaplotig	exon	67797544	67798776	99	+	.	Parent=comp160644_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67797771	67797870	.	+	0	Parent=comp160644_c0_seq1.mrna1
Chr2	gffcl	locus	67803287	67803929	.	+	.	ID=RLOC_00018201;geneIDs=comp152701_c0_seq1.path1;transcripts=comp152701_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67803287	67803929	.	+	.	ID=comp152701_c0_seq1.mrna1;geneID=comp152701_c0_seq1.path1;Name=comp152701_c0_seq1;Dir=indeterminatecoverage=87.7;identity=96.0;matches=617;mismatches=24;indels=2;unknowns=0;Target=comp152701_c0_seq1 731 91 .;CDS_Target=comp152701_c0_seq1 729 478 .;locus=RLOC_00018201
Chr2	stalkie_big_nohaplotig	exon	67803287	67803929	95	+	.	Parent=comp152701_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67803676	67803927	.	+	0	Parent=comp152701_c0_seq1.mrna1
Chr2	gffcl	locus	67878280	68364914	.	.	.	ID=RLOC_00018203;geneIDs=FBgn0039908.1.path1,FBgn0039932.1.path1,comp155225_c0_seq1.path1,comp161402_c0_seq1.path1;transcripts=FBgn0039932.1.mrna1,FBgn0039908.1.mrna1,comp155225_c0_seq1.mrna1,comp161402_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67878280	67885868	.	+	.	ID=FBgn0039932.1.mrna1;geneID=FBgn0039932.1.path1;Name=FBgn0039932.1;Dir=sensecoverage=100.0;identity=99.8;matches=2161;mismatches=5;indels=0;unknowns=0;locus=RLOC_00018203
Chr2	stalkie_big_nohaplotig	exon	67878280	67878456	100	+	.	Parent=FBgn0039932.1.mrna1;Target=FBgn0039932.1 1 177 +
Chr2	stalkie_big_nohaplotig	exon	67883880	67885868	99	+	.	Parent=FBgn0039932.1.mrna1;Target=FBgn0039932.1 178 2166 +
Chr2	stalkie_big_nohaplotig	CDS	67878280	67878456	.	+	0	Parent=FBgn0039932.1.mrna1;Target=FBgn0039932.1 1 177 +
Chr2	stalkie_big_nohaplotig	CDS	67883880	67885868	.	+	0	Parent=FBgn0039932.1.mrna1;Target=FBgn0039932.1 178 2166 +
Chr2	stalkie_big_nohaplotig	mRNA	67882517	68364914	.	+	.	ID=FBgn0039908.1.mrna1;geneID=FBgn0039908.1.path1;Name=FBgn0039908.1;Dir=sensecoverage=71.0;identity=98.4;matches=2967;mismatches=33;indels=15;unknowns=0;locus=RLOC_00018203
Chr2	stalkie_big_nohaplotig	exon	67882517	67882524	75	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1337 1344 +
Chr2	stalkie_big_nohaplotig	exon	67885691	67885692	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1345 1346 +
Chr2	stalkie_big_nohaplotig	exon	67888699	67888705	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1347 1353 +
Chr2	stalkie_big_nohaplotig	exon	67892056	67892062	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1354 1360 +
Chr2	stalkie_big_nohaplotig	exon	67892076	67892080	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1415 1419 +
Chr2	stalkie_big_nohaplotig	exon	67912568	67912571	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1420 1423 +
Chr2	stalkie_big_nohaplotig	exon	67919655	67919662	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1424 1431 +
Chr2	stalkie_big_nohaplotig	exon	67948811	67948818	87	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1432 1439 +
Chr2	stalkie_big_nohaplotig	exon	67969937	67969945	77	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1440 1448 +
Chr2	stalkie_big_nohaplotig	exon	67986002	67986006	60	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1449 1453 +
Chr2	stalkie_big_nohaplotig	exon	67986092	67986101	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1454 1463 +
Chr2	stalkie_big_nohaplotig	exon	67997592	67997599	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1465 1472 +
Chr2	stalkie_big_nohaplotig	exon	68025401	68025411	81	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1473 1483 +
Chr2	stalkie_big_nohaplotig	exon	68051797	68051804	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1484 1491 +
Chr2	stalkie_big_nohaplotig	exon	68081157	68081160	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1532 1535 +
Chr2	stalkie_big_nohaplotig	exon	68088500	68088507	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1536 1543 +
Chr2	stalkie_big_nohaplotig	exon	68107332	68107336	80	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1544 1548 +
Chr2	stalkie_big_nohaplotig	exon	68107346	68107357	91	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1581 1592 +
Chr2	stalkie_big_nohaplotig	exon	68122276	68122282	85	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1593 1599 +
Chr2	stalkie_big_nohaplotig	exon	68125691	68125703	84	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1600 1612 +
Chr2	stalkie_big_nohaplotig	exon	68131549	68131557	88	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1613 1621 +
Chr2	stalkie_big_nohaplotig	exon	68131764	68131808	51	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1622 1681 +
Chr2	stalkie_big_nohaplotig	exon	68135738	68135743	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1721 1726 +
Chr2	stalkie_big_nohaplotig	exon	68168072	68168081	90	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1727 1736 +
Chr2	stalkie_big_nohaplotig	exon	68237243	68237247	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1787 1791 +
Chr2	stalkie_big_nohaplotig	exon	68245412	68245414	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1808 1810 +
Chr2	stalkie_big_nohaplotig	exon	68249270	68249271	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1811 1812 +
Chr2	stalkie_big_nohaplotig	exon	68265549	68265550	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1813 1814 +
Chr2	stalkie_big_nohaplotig	exon	68272730	68272741	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1815 1826 +
Chr2	stalkie_big_nohaplotig	exon	68292165	68292169	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1851 1855 +
Chr2	stalkie_big_nohaplotig	exon	68332159	68332166	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1856 1863 +
Chr2	stalkie_big_nohaplotig	exon	68348154	68349029	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 1864 2739 +
Chr2	stalkie_big_nohaplotig	exon	68352766	68352974	99	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 2740 2948 +
Chr2	stalkie_big_nohaplotig	exon	68360990	68361134	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 2949 3093 +
Chr2	stalkie_big_nohaplotig	exon	68363116	68363229	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 3094 3207 +
Chr2	stalkie_big_nohaplotig	exon	68363285	68363567	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 3208 3490 +
Chr2	stalkie_big_nohaplotig	exon	68363625	68364068	99	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 3491 3934 +
Chr2	stalkie_big_nohaplotig	exon	68364125	68364391	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 3935 4201 +
Chr2	stalkie_big_nohaplotig	exon	68364453	68364549	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 4202 4298 +
Chr2	stalkie_big_nohaplotig	exon	68364611	68364914	100	+	.	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 4299 4602 +
Chr2	stalkie_big_nohaplotig	CDS	68348352	68349029	.	+	0	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 2062 2739 +
Chr2	stalkie_big_nohaplotig	CDS	68352766	68352974	.	+	0	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 2740 2948 +
Chr2	stalkie_big_nohaplotig	CDS	68360990	68361134	.	+	1	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 2949 3093 +
Chr2	stalkie_big_nohaplotig	CDS	68363116	68363229	.	+	0	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 3094 3207 +
Chr2	stalkie_big_nohaplotig	CDS	68363285	68363567	.	+	0	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 3208 3490 +
Chr2	stalkie_big_nohaplotig	CDS	68363625	68364068	.	+	2	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 3491 3934 +
Chr2	stalkie_big_nohaplotig	CDS	68364125	68364391	.	+	2	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 3935 4201 +
Chr2	stalkie_big_nohaplotig	CDS	68364453	68364549	.	+	2	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 4202 4298 +
Chr2	stalkie_big_nohaplotig	CDS	68364611	68364914	.	+	1	Parent=FBgn0039908.1.mrna1;Target=FBgn0039908.1 4299 4602 +
Chr2	stalkie_big_nohaplotig	mRNA	68129737	68132344	.	+	.	ID=comp155225_c0_seq1.mrna1;geneID=comp155225_c0_seq1.path1;Name=comp155225_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=2601;mismatches=7;indels=1;unknowns=0;Target=comp155225_c0_seq1 2609 1 .;CDS_Target=comp155225_c0_seq1 2254 2102 .;locus=RLOC_00018203
Chr2	stalkie_big_nohaplotig	exon	68129737	68132344	99	+	.	Parent=comp155225_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68131837	68131989	.	+	0	Parent=comp155225_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68237071	68239335	.	-	.	ID=comp161402_c0_seq1.mrna1;geneID=comp161402_c0_seq1.path1;Name=comp161402_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.8;matches=2261;mismatches=4;indels=0;unknowns=0;Target=comp161402_c0_seq1 2294 30 .;CDS_Target=comp161402_c0_seq1 1351 1118 .;locus=RLOC_00018203
Chr2	stalkie_big_nohaplotig	exon	68237071	68239335	99	-	.	Parent=comp161402_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68238014	68238247	.	-	0	Parent=comp161402_c0_seq1.mrna1
Chr2	gffcl	locus	67947936	67949000	.	-	.	ID=RLOC_00018204;geneIDs=FBgn0039902.1.path1;transcripts=FBgn0039902.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67947936	67949000	.	-	.	ID=FBgn0039902.1.mrna1;geneID=FBgn0039902.1.path1;Name=FBgn0039902.1;Dir=sensecoverage=100.0;identity=100.0;matches=924;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018204
Chr2	stalkie_big_nohaplotig	exon	67947936	67948450	100	-	.	Parent=FBgn0039902.1.mrna1;Target=FBgn0039902.1 410 924 +
Chr2	stalkie_big_nohaplotig	exon	67948535	67948829	100	-	.	Parent=FBgn0039902.1.mrna1;Target=FBgn0039902.1 115 409 +
Chr2	stalkie_big_nohaplotig	exon	67948887	67949000	100	-	.	Parent=FBgn0039902.1.mrna1;Target=FBgn0039902.1 1 114 +
Chr2	stalkie_big_nohaplotig	CDS	67947936	67948450	.	-	2	Parent=FBgn0039902.1.mrna1;Target=FBgn0039902.1 410 924 +
Chr2	stalkie_big_nohaplotig	CDS	67948535	67948829	.	-	0	Parent=FBgn0039902.1.mrna1;Target=FBgn0039902.1 115 409 +
Chr2	stalkie_big_nohaplotig	CDS	67948887	67949000	.	-	0	Parent=FBgn0039902.1.mrna1;Target=FBgn0039902.1 1 114 +
Chr2	gffcl	locus	67966564	67967083	.	-	.	ID=RLOC_00018205;geneIDs=comp150686_c0_seq1.path1;transcripts=comp150686_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67966564	67967083	.	-	.	ID=comp150686_c0_seq1.mrna1;geneID=comp150686_c0_seq1.path1;Name=comp150686_c0_seq1;Dir=antisensecoverage=97.0;identity=98.0;matches=442;mismatches=9;indels=0;unknowns=0;Target=comp150686_c0_seq1 1 99 .;locus=RLOC_00018205
Chr2	stalkie_big_nohaplotig	exon	67966564	67966883	98	-	.	Parent=comp150686_c0_seq1.mrna1;Target=comp150686_c0_seq1 1 320 -
Chr2	stalkie_big_nohaplotig	exon	67966953	67967083	97	-	.	Parent=comp150686_c0_seq1.mrna1;Target=comp150686_c0_seq1 321 451 -
Chr2	stalkie_big_nohaplotig	CDS	67966564	67966662	.	-	0	Parent=comp150686_c0_seq1.mrna1
Chr2	gffcl	locus	67968696	67968896	.	+	.	ID=RLOC_00018206;geneIDs=comp106258_c0_seq1.path1;transcripts=comp106258_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67968696	67968896	.	+	.	ID=comp106258_c0_seq1.mrna1;geneID=comp106258_c0_seq1.path1;Name=comp106258_c0_seq1;Dir=indeterminatecoverage=99.5;identity=97.0;matches=195;mismatches=6;indels=0;unknowns=0;Target=comp106258_c0_seq1 202 2 .;CDS_Target=comp106258_c0_seq1 152 3 .;locus=RLOC_00018206
Chr2	stalkie_big_nohaplotig	exon	67968696	67968896	97	+	.	Parent=comp106258_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67968697	67968846	.	+	0	Parent=comp106258_c0_seq1.mrna1
Chr2	gffcl	locus	67971020	67983605	.	-	.	ID=RLOC_00018207;geneIDs=FBgn0067102.1.path1;transcripts=FBgn0067102.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67971020	67983605	.	-	.	ID=FBgn0067102.1.mrna1;geneID=FBgn0067102.1.path1;Name=FBgn0067102.1;Dir=sensecoverage=100.0;identity=100.0;matches=1254;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018207
Chr2	stalkie_big_nohaplotig	exon	67971020	67971220	100	-	.	Parent=FBgn0067102.1.mrna1;Target=FBgn0067102.1 1054 1254 +
Chr2	stalkie_big_nohaplotig	exon	67971416	67971871	100	-	.	Parent=FBgn0067102.1.mrna1;Target=FBgn0067102.1 598 1053 +
Chr2	stalkie_big_nohaplotig	exon	67971927	67972039	100	-	.	Parent=FBgn0067102.1.mrna1;Target=FBgn0067102.1 485 597 +
Chr2	stalkie_big_nohaplotig	exon	67976241	67976445	100	-	.	Parent=FBgn0067102.1.mrna1;Target=FBgn0067102.1 280 484 +
Chr2	stalkie_big_nohaplotig	exon	67976494	67976635	100	-	.	Parent=FBgn0067102.1.mrna1;Target=FBgn0067102.1 138 279 +
Chr2	stalkie_big_nohaplotig	exon	67983469	67983605	100	-	.	Parent=FBgn0067102.1.mrna1;Target=FBgn0067102.1 1 137 +
Chr2	stalkie_big_nohaplotig	CDS	67971020	67971220	.	-	0	Parent=FBgn0067102.1.mrna1;Target=FBgn0067102.1 1054 1254 +
Chr2	stalkie_big_nohaplotig	CDS	67971416	67971871	.	-	0	Parent=FBgn0067102.1.mrna1;Target=FBgn0067102.1 598 1053 +
Chr2	stalkie_big_nohaplotig	CDS	67971927	67972039	.	-	2	Parent=FBgn0067102.1.mrna1;Target=FBgn0067102.1 485 597 +
Chr2	stalkie_big_nohaplotig	CDS	67976241	67976445	.	-	0	Parent=FBgn0067102.1.mrna1;Target=FBgn0067102.1 280 484 +
Chr2	stalkie_big_nohaplotig	CDS	67976494	67976635	.	-	1	Parent=FBgn0067102.1.mrna1;Target=FBgn0067102.1 138 279 +
Chr2	stalkie_big_nohaplotig	CDS	67983469	67983605	.	-	0	Parent=FBgn0067102.1.mrna1;Target=FBgn0067102.1 1 137 +
Chr2	gffcl	locus	67984310	67986395	.	-	.	ID=RLOC_00018208;geneIDs=comp160790_c1_seq1.path2;transcripts=comp160790_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	67984310	67986395	.	-	.	ID=comp160790_c1_seq1.mrna2;geneID=comp160790_c1_seq1.path2;Name=comp160790_c1_seq1;Dir=indeterminatecoverage=99.2;identity=96.6;matches=1464;mismatches=3;indels=49;unknowns=0;locus=RLOC_00018208
Chr2	stalkie_big_nohaplotig	exon	67984310	67984615	100	-	.	Parent=comp160790_c1_seq1.mrna2;Target=comp160790_c1_seq1 1479 1174 .
Chr2	stalkie_big_nohaplotig	exon	67984676	67985226	90	-	.	Parent=comp160790_c1_seq1.mrna2;Target=comp160790_c1_seq1 1173 672 .
Chr2	stalkie_big_nohaplotig	exon	67985596	67985978	99	-	.	Parent=comp160790_c1_seq1.mrna2;Target=comp160790_c1_seq1 671 289 .
Chr2	stalkie_big_nohaplotig	exon	67986120	67986395	99	-	.	Parent=comp160790_c1_seq1.mrna2;Target=comp160790_c1_seq1 288 13 .
Chr2	stalkie_big_nohaplotig	CDS	67985804	67985978	.	-	1	Parent=comp160790_c1_seq1.mrna2;Target=comp160790_c1_seq1 463 289 .
Chr2	stalkie_big_nohaplotig	CDS	67986120	67986394	.	-	0	Parent=comp160790_c1_seq1.mrna2;Target=comp160790_c1_seq1 288 14 .
Chr2	gffcl	locus	67984376	67985171	.	+	.	ID=RLOC_00018209;geneIDs=Dv_FBgn0201266.6.path1;transcripts=Dv_FBgn0201266.6.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67984376	67985171	.	+	.	ID=Dv_FBgn0201266.6.mrna1;geneID=Dv_FBgn0201266.6.path1;Name=Dv_FBgn0201266.6;Dir=sensecoverage=100.0;identity=99.9;matches=686;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018209
Chr2	stalkie_big_nohaplotig	exon	67984376	67984615	100	+	.	Parent=Dv_FBgn0201266.6.mrna1;Target=Dv_FBgn0201266.6 1 240 +
Chr2	stalkie_big_nohaplotig	exon	67984676	67985075	99	+	.	Parent=Dv_FBgn0201266.6.mrna1;Target=Dv_FBgn0201266.6 241 640 +
Chr2	stalkie_big_nohaplotig	exon	67985125	67985171	100	+	.	Parent=Dv_FBgn0201266.6.mrna1;Target=Dv_FBgn0201266.6 641 687 +
Chr2	stalkie_big_nohaplotig	CDS	67984376	67984615	.	+	0	Parent=Dv_FBgn0201266.6.mrna1;Target=Dv_FBgn0201266.6 1 240 +
Chr2	stalkie_big_nohaplotig	CDS	67984676	67985075	.	+	0	Parent=Dv_FBgn0201266.6.mrna1;Target=Dv_FBgn0201266.6 241 640 +
Chr2	stalkie_big_nohaplotig	CDS	67985125	67985171	.	+	2	Parent=Dv_FBgn0201266.6.mrna1;Target=Dv_FBgn0201266.6 641 687 +
Chr2	gffcl	locus	67996120	67997295	.	-	.	ID=RLOC_00018211;geneIDs=comp153102_c0_seq1.path1;transcripts=comp153102_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	67996120	67997295	.	-	.	ID=comp153102_c0_seq1.mrna1;geneID=comp153102_c0_seq1.path1;Name=comp153102_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.7;matches=1172;mismatches=4;indels=0;unknowns=0;Target=comp153102_c0_seq1 1188 13 .;CDS_Target=comp153102_c0_seq1 350 279 .;locus=RLOC_00018211
Chr2	stalkie_big_nohaplotig	exon	67996120	67997295	99	-	.	Parent=comp153102_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	67996958	67997029	.	-	0	Parent=comp153102_c0_seq1.mrna1
Chr2	gffcl	locus	68012196	68019158	.	-	.	ID=RLOC_00018212;geneIDs=FBgn0039923.1.path1;transcripts=FBgn0039923.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68012196	68019158	.	-	.	ID=FBgn0039923.1.mrna1;geneID=FBgn0039923.1.path1;Name=FBgn0039923.1;Dir=sensecoverage=100.0;identity=100.0;matches=2806;mismatches=0;indels=1;unknowns=0;Target=FBgn0039923.1 3 50 +;locus=RLOC_00018212
Chr2	stalkie_big_nohaplotig	exon	68012196	68014785	100	-	.	Parent=FBgn0039923.1.mrna1;Target=FBgn0039923.1 218 2807 +
Chr2	stalkie_big_nohaplotig	exon	68014877	68014972	100	-	.	Parent=FBgn0039923.1.mrna1;Target=FBgn0039923.1 122 217 +
Chr2	stalkie_big_nohaplotig	exon	68019039	68019158	99	-	.	Parent=FBgn0039923.1.mrna1;Target=FBgn0039923.1 1 121 +
Chr2	stalkie_big_nohaplotig	CDS	68019110	68019156	.	-	0	Parent=FBgn0039923.1.mrna1
Chr2	gffcl	locus	68016095	68017286	.	+	.	ID=RLOC_00018213;geneIDs=comp158932_c4_seq1.path1;transcripts=comp158932_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68016095	68017286	.	+	.	ID=comp158932_c4_seq1.mrna1;geneID=comp158932_c4_seq1.path1;Name=comp158932_c4_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1190;mismatches=2;indels=0;unknowns=0;Target=comp158932_c4_seq1 1192 1 .;CDS_Target=comp158932_c4_seq1 604 407 .;locus=RLOC_00018213
Chr2	stalkie_big_nohaplotig	exon	68016095	68017286	99	+	.	Parent=comp158932_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68016501	68016698	.	+	0	Parent=comp158932_c4_seq1.mrna1
Chr2	gffcl	locus	68029277	68030165	.	+	.	ID=RLOC_00018214;geneIDs=FBgn0011824.2.path1;transcripts=FBgn0011824.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68029277	68030165	.	+	.	ID=FBgn0011824.2.mrna1;geneID=FBgn0011824.2.path1;Name=FBgn0011824.2;Dir=sensecoverage=100.0;identity=100.0;matches=657;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018214
Chr2	stalkie_big_nohaplotig	exon	68029277	68029310	100	+	.	Parent=FBgn0011824.2.mrna1;Target=FBgn0011824.2 1 34 +
Chr2	stalkie_big_nohaplotig	exon	68029366	68029487	100	+	.	Parent=FBgn0011824.2.mrna1;Target=FBgn0011824.2 35 156 +
Chr2	stalkie_big_nohaplotig	exon	68029547	68029904	100	+	.	Parent=FBgn0011824.2.mrna1;Target=FBgn0011824.2 157 514 +
Chr2	stalkie_big_nohaplotig	exon	68029962	68030003	100	+	.	Parent=FBgn0011824.2.mrna1;Target=FBgn0011824.2 515 556 +
Chr2	stalkie_big_nohaplotig	exon	68030065	68030165	100	+	.	Parent=FBgn0011824.2.mrna1;Target=FBgn0011824.2 557 657 +
Chr2	stalkie_big_nohaplotig	CDS	68029277	68029310	.	+	0	Parent=FBgn0011824.2.mrna1;Target=FBgn0011824.2 1 34 +
Chr2	stalkie_big_nohaplotig	CDS	68029366	68029487	.	+	2	Parent=FBgn0011824.2.mrna1;Target=FBgn0011824.2 35 156 +
Chr2	stalkie_big_nohaplotig	CDS	68029547	68029904	.	+	0	Parent=FBgn0011824.2.mrna1;Target=FBgn0011824.2 157 514 +
Chr2	stalkie_big_nohaplotig	CDS	68029962	68030003	.	+	2	Parent=FBgn0011824.2.mrna1;Target=FBgn0011824.2 515 556 +
Chr2	stalkie_big_nohaplotig	CDS	68030065	68030165	.	+	2	Parent=FBgn0011824.2.mrna1;Target=FBgn0011824.2 557 657 +
Chr2	gffcl	locus	68031902	68032379	.	+	.	ID=RLOC_00018215;geneIDs=comp145122_c0_seq1.path1;transcripts=comp145122_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68031902	68032379	.	+	.	ID=comp145122_c0_seq1.mrna1;geneID=comp145122_c0_seq1.path1;Name=comp145122_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.5;matches=478;mismatches=0;indels=39;unknowns=0;Target=comp145122_c0_seq1 517 1 .;CDS_Target=comp145122_c0_seq1 511 386 .;locus=RLOC_00018215
Chr2	stalkie_big_nohaplotig	exon	68031902	68032379	92	+	.	Parent=comp145122_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68032248	68032373	.	+	0	Parent=comp145122_c0_seq1.mrna1
Chr2	gffcl	locus	68032787	68033672	.	-	.	ID=RLOC_00018216;geneIDs=comp149244_c2_seq1.path1;transcripts=comp149244_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68032787	68033672	.	-	.	ID=comp149244_c2_seq1.mrna1;geneID=comp149244_c2_seq1.path1;Name=comp149244_c2_seq1;Dir=indeterminatecoverage=99.2;identity=100.0;matches=886;mismatches=0;indels=0;unknowns=0;Target=comp149244_c2_seq1 886 1 .;CDS_Target=comp149244_c2_seq1 464 324 .;locus=RLOC_00018216
Chr2	stalkie_big_nohaplotig	exon	68032787	68033672	100	-	.	Parent=comp149244_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68033209	68033349	.	-	0	Parent=comp149244_c2_seq1.mrna1
Chr2	gffcl	locus	68039798	68043504	.	-	.	ID=RLOC_00018217;geneIDs=FBgn0041723.1.path1;transcripts=FBgn0041723.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68039798	68043504	.	-	.	ID=FBgn0041723.1.mrna1;geneID=FBgn0041723.1.path1;Name=FBgn0041723.1;Dir=sensecoverage=100.0;identity=99.9;matches=3601;mismatches=1;indels=1;unknowns=0;locus=RLOC_00018217
Chr2	stalkie_big_nohaplotig	exon	68039798	68039844	97	-	.	Parent=FBgn0041723.1.mrna1;Target=FBgn0041723.1 3556 3603 +
Chr2	stalkie_big_nohaplotig	exon	68039898	68040239	100	-	.	Parent=FBgn0041723.1.mrna1;Target=FBgn0041723.1 3214 3555 +
Chr2	stalkie_big_nohaplotig	exon	68040292	68043504	99	-	.	Parent=FBgn0041723.1.mrna1;Target=FBgn0041723.1 1 3213 +
Chr2	stalkie_big_nohaplotig	CDS	68039798	68039844	.	-	0	Parent=FBgn0041723.1.mrna1;Target=FBgn0041723.1 3556 3603 +
Chr2	stalkie_big_nohaplotig	CDS	68039898	68040239	.	-	0	Parent=FBgn0041723.1.mrna1;Target=FBgn0041723.1 3214 3555 +
Chr2	stalkie_big_nohaplotig	CDS	68040292	68043504	.	-	0	Parent=FBgn0041723.1.mrna1;Target=FBgn0041723.1 1 3213 +
Chr2	gffcl	locus	68083250	68094201	.	-	.	ID=RLOC_00018218;geneIDs=FBgn0051999.1.path1;transcripts=FBgn0051999.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68083250	68094201	.	-	.	ID=FBgn0051999.1.mrna1;geneID=FBgn0051999.1.path1;Name=FBgn0051999.1;Dir=sensecoverage=91.2;identity=99.9;matches=2591;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018218
Chr2	stalkie_big_nohaplotig	exon	68083250	68083480	100	-	.	Parent=FBgn0051999.1.mrna1;Target=FBgn0051999.1 2454 2684 +
Chr2	stalkie_big_nohaplotig	exon	68083549	68084197	100	-	.	Parent=FBgn0051999.1.mrna1;Target=FBgn0051999.1 1805 2453 +
Chr2	stalkie_big_nohaplotig	exon	68084262	68084399	100	-	.	Parent=FBgn0051999.1.mrna1;Target=FBgn0051999.1 1667 1804 +
Chr2	stalkie_big_nohaplotig	exon	68088560	68088886	100	-	.	Parent=FBgn0051999.1.mrna1;Target=FBgn0051999.1 1340 1666 +
Chr2	stalkie_big_nohaplotig	exon	68088936	68089076	100	-	.	Parent=FBgn0051999.1.mrna1;Target=FBgn0051999.1 1199 1339 +
Chr2	stalkie_big_nohaplotig	exon	68089157	68089285	100	-	.	Parent=FBgn0051999.1.mrna1;Target=FBgn0051999.1 1070 1198 +
Chr2	stalkie_big_nohaplotig	exon	68093146	68093595	100	-	.	Parent=FBgn0051999.1.mrna1;Target=FBgn0051999.1 620 1069 +
Chr2	stalkie_big_nohaplotig	exon	68093674	68094201	99	-	.	Parent=FBgn0051999.1.mrna1;Target=FBgn0051999.1 92 619 +
Chr2	stalkie_big_nohaplotig	CDS	68083252	68083480	.	-	1	Parent=FBgn0051999.1.mrna1;Target=FBgn0051999.1 2454 2682 +
Chr2	stalkie_big_nohaplotig	CDS	68083549	68084197	.	-	2	Parent=FBgn0051999.1.mrna1;Target=FBgn0051999.1 1805 2453 +
Chr2	stalkie_big_nohaplotig	CDS	68084262	68084399	.	-	2	Parent=FBgn0051999.1.mrna1;Target=FBgn0051999.1 1667 1804 +
Chr2	stalkie_big_nohaplotig	CDS	68088560	68088886	.	-	2	Parent=FBgn0051999.1.mrna1;Target=FBgn0051999.1 1340 1666 +
Chr2	stalkie_big_nohaplotig	CDS	68088936	68089076	.	-	2	Parent=FBgn0051999.1.mrna1;Target=FBgn0051999.1 1199 1339 +
Chr2	stalkie_big_nohaplotig	CDS	68089157	68089285	.	-	2	Parent=FBgn0051999.1.mrna1;Target=FBgn0051999.1 1070 1198 +
Chr2	stalkie_big_nohaplotig	CDS	68093146	68093595	.	-	2	Parent=FBgn0051999.1.mrna1;Target=FBgn0051999.1 620 1069 +
Chr2	stalkie_big_nohaplotig	CDS	68093674	68094199	.	-	0	Parent=FBgn0051999.1.mrna1;Target=FBgn0051999.1 94 619 +
Chr2	gffcl	locus	68104312	68105085	.	+	.	ID=RLOC_00018219;geneIDs=comp161870_c0_seq1.path4;transcripts=comp161870_c0_seq1.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	68104312	68105085	.	+	.	ID=comp161870_c0_seq1.mrna4;geneID=comp161870_c0_seq1.path4;Name=comp161870_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.0;matches=744;mismatches=10;indels=21;unknowns=0;Target=comp161870_c0_seq1 755 1 .;CDS_Target=comp161870_c0_seq1 316 206 .;locus=RLOC_00018219
Chr2	stalkie_big_nohaplotig	exon	68104312	68105085	96	+	.	Parent=comp161870_c0_seq1.mrna4
Chr2	stalkie_big_nohaplotig	CDS	68104517	68104626	.	+	0	Parent=comp161870_c0_seq1.mrna4
Chr2	gffcl	locus	68109155	68116307	.	-	.	ID=RLOC_00018220;geneIDs=FBgn0039896.1.path1;transcripts=FBgn0039896.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68109155	68116307	.	-	.	ID=FBgn0039896.1.mrna1;geneID=FBgn0039896.1.path1;Name=FBgn0039896.1;Dir=sensecoverage=100.0;identity=100.0;matches=1452;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018220
Chr2	stalkie_big_nohaplotig	exon	68109155	68109631	100	-	.	Parent=FBgn0039896.1.mrna1;Target=FBgn0039896.1 976 1452 +
Chr2	stalkie_big_nohaplotig	exon	68115261	68115939	100	-	.	Parent=FBgn0039896.1.mrna1;Target=FBgn0039896.1 297 975 +
Chr2	stalkie_big_nohaplotig	exon	68116012	68116307	100	-	.	Parent=FBgn0039896.1.mrna1;Target=FBgn0039896.1 1 296 +
Chr2	stalkie_big_nohaplotig	CDS	68109155	68109631	.	-	0	Parent=FBgn0039896.1.mrna1;Target=FBgn0039896.1 976 1452 +
Chr2	stalkie_big_nohaplotig	CDS	68115261	68115939	.	-	1	Parent=FBgn0039896.1.mrna1;Target=FBgn0039896.1 297 975 +
Chr2	stalkie_big_nohaplotig	CDS	68116012	68116307	.	-	0	Parent=FBgn0039896.1.mrna1;Target=FBgn0039896.1 1 296 +
Chr2	gffcl	locus	68110695	68111552	.	+	.	ID=RLOC_00018221;geneIDs=comp147830_c0_seq1.path1;transcripts=comp147830_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68110695	68111552	.	+	.	ID=comp147830_c0_seq1.mrna1;geneID=comp147830_c0_seq1.path1;Name=comp147830_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=796;mismatches=0;indels=2;unknowns=0;Target=comp147830_c0_seq1 500 628 .;locus=RLOC_00018221
Chr2	stalkie_big_nohaplotig	exon	68110695	68111208	100	+	.	Parent=comp147830_c0_seq1.mrna1;Target=comp147830_c0_seq1 284 797 -
Chr2	stalkie_big_nohaplotig	exon	68111270	68111552	99	+	.	Parent=comp147830_c0_seq1.mrna1;Target=comp147830_c0_seq1 1 283 -
Chr2	stalkie_big_nohaplotig	CDS	68110864	68110992	.	+	0	Parent=comp147830_c0_seq1.mrna1
Chr2	gffcl	locus	68111885	68112412	.	+	.	ID=RLOC_00018222;geneIDs=comp156302_c0_seq1.path1;transcripts=comp156302_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68111885	68112412	.	+	.	ID=comp156302_c0_seq1.mrna1;geneID=comp156302_c0_seq1.path1;Name=comp156302_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=528;mismatches=0;indels=0;unknowns=0;Target=comp156302_c0_seq1 528 1 .;CDS_Target=comp156302_c0_seq1 526 431 .;locus=RLOC_00018222
Chr2	stalkie_big_nohaplotig	exon	68111885	68112412	100	+	.	Parent=comp156302_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68112315	68112410	.	+	0	Parent=comp156302_c0_seq1.mrna1
Chr2	gffcl	locus	68146082	70074861	.	-	.	ID=RLOC_00018223;geneIDs=comp157984_c0_seq1.path1;transcripts=comp157984_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68146082	70074861	.	-	.	ID=comp157984_c0_seq1.mrna1;geneID=comp157984_c0_seq1.path1;Name=comp157984_c0_seq1;Dir=indeterminatecoverage=84.5;identity=90.1;matches=1006;mismatches=105;indels=6;unknowns=0;Target=comp157984_c0_seq1 447 415 .;locus=RLOC_00018223
Chr2	stalkie_big_nohaplotig	exon	68146082	68146167	90	-	.	Parent=comp157984_c0_seq1.mrna1;Target=comp157984_c0_seq1 1333 1248 .
Chr2	stalkie_big_nohaplotig	exon	68146794	68146798	100	-	.	Parent=comp157984_c0_seq1.mrna1;Target=comp157984_c0_seq1 1247 1243 .
Chr2	stalkie_big_nohaplotig	exon	68195649	68195683	88	-	.	Parent=comp157984_c0_seq1.mrna1;Target=comp157984_c0_seq1 1242 1208 .
Chr2	stalkie_big_nohaplotig	exon	68196054	68196094	80	-	.	Parent=comp157984_c0_seq1.mrna1;Target=comp157984_c0_seq1 1201 1161 .
Chr2	stalkie_big_nohaplotig	exon	68196103	68196125	100	-	.	Parent=comp157984_c0_seq1.mrna1;Target=comp157984_c0_seq1 1151 1129 .
Chr2	stalkie_big_nohaplotig	exon	68197410	68197411	100	-	.	Parent=comp157984_c0_seq1.mrna1;Target=comp157984_c0_seq1 1128 1127 .
Chr2	stalkie_big_nohaplotig	exon	68202610	68202611	100	-	.	Parent=comp157984_c0_seq1.mrna1;Target=comp157984_c0_seq1 1126 1125 .
Chr2	stalkie_big_nohaplotig	exon	68211484	68211507	66	-	.	Parent=comp157984_c0_seq1.mrna1;Target=comp157984_c0_seq1 1124 1101 .
Chr2	stalkie_big_nohaplotig	exon	68218376	68218378	100	-	.	Parent=comp157984_c0_seq1.mrna1;Target=comp157984_c0_seq1 1100 1098 .
Chr2	stalkie_big_nohaplotig	exon	70072131	70072221	89	-	.	Parent=comp157984_c0_seq1.mrna1;Target=comp157984_c0_seq1 1097 1007 .
Chr2	stalkie_big_nohaplotig	exon	70074057	70074861	90	-	.	Parent=comp157984_c0_seq1.mrna1;Target=comp157984_c0_seq1 1006 208 .
Chr2	stalkie_big_nohaplotig	CDS	70074622	70074654	.	-	0	Parent=comp157984_c0_seq1.mrna1
Chr2	gffcl	locus	68192340	68233849	.	+	.	ID=RLOC_00018224;geneIDs=FBgn0004624.1.path1;transcripts=FBgn0004624.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68192340	68233849	.	+	.	ID=FBgn0004624.1.mrna1;geneID=FBgn0004624.1.path1;Name=FBgn0004624.1;Dir=sensecoverage=99.8;identity=99.9;matches=1695;mismatches=0;indels=1;unknowns=0;Target=FBgn0004624.1 5 13 +;locus=RLOC_00018224
Chr2	stalkie_big_nohaplotig	exon	68192340	68192504	99	+	.	Parent=FBgn0004624.1.mrna1;Target=FBgn0004624.1 4 167 +
Chr2	stalkie_big_nohaplotig	exon	68192647	68192741	100	+	.	Parent=FBgn0004624.1.mrna1;Target=FBgn0004624.1 168 262 +
Chr2	stalkie_big_nohaplotig	exon	68192793	68192852	100	+	.	Parent=FBgn0004624.1.mrna1;Target=FBgn0004624.1 263 322 +
Chr2	stalkie_big_nohaplotig	exon	68199577	68199631	100	+	.	Parent=FBgn0004624.1.mrna1;Target=FBgn0004624.1 323 377 +
Chr2	stalkie_big_nohaplotig	exon	68200477	68200802	100	+	.	Parent=FBgn0004624.1.mrna1;Target=FBgn0004624.1 378 703 +
Chr2	stalkie_big_nohaplotig	exon	68200863	68200957	100	+	.	Parent=FBgn0004624.1.mrna1;Target=FBgn0004624.1 704 798 +
Chr2	stalkie_big_nohaplotig	exon	68201012	68201134	100	+	.	Parent=FBgn0004624.1.mrna1;Target=FBgn0004624.1 799 921 +
Chr2	stalkie_big_nohaplotig	exon	68201205	68201331	100	+	.	Parent=FBgn0004624.1.mrna1;Target=FBgn0004624.1 922 1048 +
Chr2	stalkie_big_nohaplotig	exon	68208648	68208740	100	+	.	Parent=FBgn0004624.1.mrna1;Target=FBgn0004624.1 1049 1141 +
Chr2	stalkie_big_nohaplotig	exon	68214098	68214154	100	+	.	Parent=FBgn0004624.1.mrna1;Target=FBgn0004624.1 1142 1198 +
Chr2	stalkie_big_nohaplotig	exon	68224346	68224414	100	+	.	Parent=FBgn0004624.1.mrna1;Target=FBgn0004624.1 1199 1267 +
Chr2	stalkie_big_nohaplotig	exon	68227293	68227371	100	+	.	Parent=FBgn0004624.1.mrna1;Target=FBgn0004624.1 1268 1346 +
Chr2	stalkie_big_nohaplotig	exon	68231933	68232027	100	+	.	Parent=FBgn0004624.1.mrna1;Target=FBgn0004624.1 1347 1441 +
Chr2	stalkie_big_nohaplotig	exon	68232078	68232192	100	+	.	Parent=FBgn0004624.1.mrna1;Target=FBgn0004624.1 1442 1556 +
Chr2	stalkie_big_nohaplotig	exon	68233708	68233849	100	+	.	Parent=FBgn0004624.1.mrna1;Target=FBgn0004624.1 1557 1698 +
Chr2	stalkie_big_nohaplotig	CDS	68192341	68192350	.	+	0	Parent=FBgn0004624.1.mrna1
Chr2	gffcl	locus	68220949	68223105	.	+	.	ID=RLOC_00018225;geneIDs=comp161952_c0_seq1.path1;transcripts=comp161952_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68220949	68223105	.	+	.	ID=comp161952_c0_seq1.mrna1;geneID=comp161952_c0_seq1.path1;Name=comp161952_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=2153;mismatches=4;indels=3;unknowns=0;Target=comp161952_c0_seq1 2160 1 .;CDS_Target=comp161952_c0_seq1 620 456 .;locus=RLOC_00018225
Chr2	stalkie_big_nohaplotig	exon	68220949	68223105	99	+	.	Parent=comp161952_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68221403	68221567	.	+	0	Parent=comp161952_c0_seq1.mrna1
Chr2	gffcl	locus	68225277	68227169	.	+	.	ID=RLOC_00018226;geneIDs=comp160935_c0_seq1.path1;transcripts=comp160935_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68225277	68227169	.	+	.	ID=comp160935_c0_seq1.mrna1;geneID=comp160935_c0_seq1.path1;Name=comp160935_c0_seq1;Dir=indeterminatecoverage=99.1;identity=97.1;matches=1873;mismatches=20;indels=36;unknowns=0;Target=comp160935_c0_seq1 1947 19 .;CDS_Target=comp160935_c0_seq1 1177 947 .;locus=RLOC_00018226
Chr2	stalkie_big_nohaplotig	exon	68225277	68227169	97	+	.	Parent=comp160935_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68226205	68226432	.	+	0	Parent=comp160935_c0_seq1.mrna1
Chr2	gffcl	locus	68262030	68263970	.	-	.	ID=RLOC_00018227;geneIDs=comp163611_c0_seq1.path7;transcripts=comp163611_c0_seq1.mrna7
Chr2	stalkie_big_nohaplotig	mRNA	68262030	68263970	.	-	.	ID=comp163611_c0_seq1.mrna7;geneID=comp163611_c0_seq1.path7;Name=comp163611_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1933;mismatches=8;indels=0;unknowns=0;Target=comp163611_c0_seq1 1941 1 .;CDS_Target=comp163611_c0_seq1 1941 478 .;locus=RLOC_00018227
Chr2	stalkie_big_nohaplotig	exon	68262030	68263970	99	-	.	Parent=comp163611_c0_seq1.mrna7
Chr2	stalkie_big_nohaplotig	CDS	68262030	68263493	.	-	0	Parent=comp163611_c0_seq1.mrna7
Chr2	gffcl	locus	68305915	68307855	.	+	.	ID=RLOC_00018228;geneIDs=comp163611_c0_seq1.path8;transcripts=comp163611_c0_seq1.mrna8
Chr2	stalkie_big_nohaplotig	mRNA	68305915	68307855	.	+	.	ID=comp163611_c0_seq1.mrna8;geneID=comp163611_c0_seq1.path8;Name=comp163611_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1933;mismatches=8;indels=0;unknowns=0;Target=comp163611_c0_seq1 1941 1 .;locus=RLOC_00018228
Chr2	stalkie_big_nohaplotig	exon	68305915	68307855	99	+	.	Parent=comp163611_c0_seq1.mrna8
Chr2	stalkie_big_nohaplotig	CDS	68305915	68307855	.	+	0	Parent=comp163611_c0_seq1.mrna8
Chr2	gffcl	locus	68365856	68366177	.	-	.	ID=RLOC_00018229;geneIDs=comp135455_c0_seq1.path1;transcripts=comp135455_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68365856	68366177	.	-	.	ID=comp135455_c0_seq1.mrna1;geneID=comp135455_c0_seq1.path1;Name=comp135455_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=316;mismatches=6;indels=0;unknowns=0;Target=comp135455_c0_seq1 322 1 .;CDS_Target=comp135455_c0_seq1 53 3 .;locus=RLOC_00018229
Chr2	stalkie_big_nohaplotig	exon	68365856	68366177	98	-	.	Parent=comp135455_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68366125	68366175	.	-	0	Parent=comp135455_c0_seq1.mrna1
Chr2	gffcl	locus	68372720	68377197	.	-	.	ID=RLOC_00018230;geneIDs=FBgn0053481.1.path1,comp140959_c0_seq1.path1,comp150439_c0_seq1.path1;transcripts=FBgn0053481.1.mrna1,comp140959_c0_seq1.mrna1,comp150439_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68372720	68376518	.	-	.	ID=FBgn0053481.1.mrna1;geneID=FBgn0053481.1.path1;Name=FBgn0053481.1;Dir=sensecoverage=100.0;identity=100.0;matches=891;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018230
Chr2	stalkie_big_nohaplotig	exon	68372720	68372871	100	-	.	Parent=FBgn0053481.1.mrna1;Target=FBgn0053481.1 740 891 +
Chr2	stalkie_big_nohaplotig	exon	68372942	68373024	100	-	.	Parent=FBgn0053481.1.mrna1;Target=FBgn0053481.1 657 739 +
Chr2	stalkie_big_nohaplotig	exon	68373092	68373196	100	-	.	Parent=FBgn0053481.1.mrna1;Target=FBgn0053481.1 552 656 +
Chr2	stalkie_big_nohaplotig	exon	68373397	68373499	100	-	.	Parent=FBgn0053481.1.mrna1;Target=FBgn0053481.1 449 551 +
Chr2	stalkie_big_nohaplotig	exon	68375933	68376143	100	-	.	Parent=FBgn0053481.1.mrna1;Target=FBgn0053481.1 238 448 +
Chr2	stalkie_big_nohaplotig	exon	68376212	68376327	100	-	.	Parent=FBgn0053481.1.mrna1;Target=FBgn0053481.1 122 237 +
Chr2	stalkie_big_nohaplotig	exon	68376398	68376518	100	-	.	Parent=FBgn0053481.1.mrna1;Target=FBgn0053481.1 1 121 +
Chr2	stalkie_big_nohaplotig	CDS	68372720	68372871	.	-	2	Parent=FBgn0053481.1.mrna1;Target=FBgn0053481.1 740 891 +
Chr2	stalkie_big_nohaplotig	CDS	68372942	68373024	.	-	1	Parent=FBgn0053481.1.mrna1;Target=FBgn0053481.1 657 739 +
Chr2	stalkie_big_nohaplotig	CDS	68373092	68373196	.	-	1	Parent=FBgn0053481.1.mrna1;Target=FBgn0053481.1 552 656 +
Chr2	stalkie_big_nohaplotig	CDS	68373397	68373499	.	-	2	Parent=FBgn0053481.1.mrna1;Target=FBgn0053481.1 449 551 +
Chr2	stalkie_big_nohaplotig	CDS	68375933	68376143	.	-	0	Parent=FBgn0053481.1.mrna1;Target=FBgn0053481.1 238 448 +
Chr2	stalkie_big_nohaplotig	CDS	68376212	68376327	.	-	2	Parent=FBgn0053481.1.mrna1;Target=FBgn0053481.1 122 237 +
Chr2	stalkie_big_nohaplotig	CDS	68376398	68376518	.	-	0	Parent=FBgn0053481.1.mrna1;Target=FBgn0053481.1 1 121 +
Chr2	stalkie_big_nohaplotig	mRNA	68373174	68373433	.	-	.	ID=comp140959_c0_seq1.mrna1;geneID=comp140959_c0_seq1.path1;Name=comp140959_c0_seq1;Dir=indeterminatecoverage=99.6;identity=96.9;matches=252;mismatches=8;indels=0;unknowns=0;Target=comp140959_c0_seq1 261 2 .;CDS_Target=comp140959_c0_seq1 137 3 .;locus=RLOC_00018230
Chr2	stalkie_big_nohaplotig	exon	68373174	68373433	96	-	.	Parent=comp140959_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68373298	68373432	.	-	0	Parent=comp140959_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68374662	68377197	.	-	.	ID=comp150439_c0_seq1.mrna1;geneID=comp150439_c0_seq1.path1;Name=comp150439_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=2054;mismatches=7;indels=8;unknowns=0;locus=RLOC_00018230
Chr2	stalkie_big_nohaplotig	exon	68374662	68376143	99	-	.	Parent=comp150439_c0_seq1.mrna1;Target=comp150439_c0_seq1 580 2069 +
Chr2	stalkie_big_nohaplotig	exon	68376212	68376327	100	-	.	Parent=comp150439_c0_seq1.mrna1;Target=comp150439_c0_seq1 464 579 +
Chr2	stalkie_big_nohaplotig	exon	68376398	68376549	100	-	.	Parent=comp150439_c0_seq1.mrna1;Target=comp150439_c0_seq1 312 463 +
Chr2	stalkie_big_nohaplotig	exon	68376887	68377197	99	-	.	Parent=comp150439_c0_seq1.mrna1;Target=comp150439_c0_seq1 1 311 +
Chr2	stalkie_big_nohaplotig	CDS	68375913	68376143	.	-	0	Parent=comp150439_c0_seq1.mrna1;Target=comp150439_c0_seq1 580 810 +
Chr2	stalkie_big_nohaplotig	CDS	68376212	68376327	.	-	2	Parent=comp150439_c0_seq1.mrna1;Target=comp150439_c0_seq1 464 579 +
Chr2	stalkie_big_nohaplotig	CDS	68376398	68376500	.	-	0	Parent=comp150439_c0_seq1.mrna1;Target=comp150439_c0_seq1 361 463 +
Chr2	gffcl	locus	68402696	68435778	.	-	.	ID=RLOC_00018231;geneIDs=comp140297_c0_seq1.path1;transcripts=comp140297_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68402696	68435778	.	-	.	ID=comp140297_c0_seq1.mrna1;geneID=comp140297_c0_seq1.path1;Name=comp140297_c0_seq1;Dir=sensecoverage=89.3;identity=99.7;matches=778;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018231
Chr2	stalkie_big_nohaplotig	exon	68402696	68403100	100	-	.	Parent=comp140297_c0_seq1.mrna1;Target=comp140297_c0_seq1 469 873 +
Chr2	stalkie_big_nohaplotig	exon	68403199	68403440	100	-	.	Parent=comp140297_c0_seq1.mrna1;Target=comp140297_c0_seq1 227 468 +
Chr2	stalkie_big_nohaplotig	exon	68403497	68403621	98	-	.	Parent=comp140297_c0_seq1.mrna1;Target=comp140297_c0_seq1 102 226 +
Chr2	stalkie_big_nohaplotig	exon	68435771	68435778	100	-	.	Parent=comp140297_c0_seq1.mrna1;Target=comp140297_c0_seq1 94 101 +
Chr2	stalkie_big_nohaplotig	CDS	68403062	68403100	.	-	0	Parent=comp140297_c0_seq1.mrna1;Target=comp140297_c0_seq1 469 507 +
Chr2	stalkie_big_nohaplotig	CDS	68403199	68403279	.	-	0	Parent=comp140297_c0_seq1.mrna1;Target=comp140297_c0_seq1 388 468 +
Chr2	gffcl	locus	68403872	68404271	.	+	.	ID=RLOC_00018232;geneIDs=comp139117_c1_seq1.path1;transcripts=comp139117_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68403872	68404271	.	+	.	ID=comp139117_c1_seq1.mrna1;geneID=comp139117_c1_seq1.path1;Name=comp139117_c1_seq1;Dir=sensecoverage=100.0;identity=92.9;matches=326;mismatches=8;indels=17;unknowns=0;Target=comp139117_c1_seq1 1 96 +;locus=RLOC_00018232
Chr2	stalkie_big_nohaplotig	exon	68403872	68403985	97	+	.	Parent=comp139117_c1_seq1.mrna1;Target=comp139117_c1_seq1 1 114 +
Chr2	stalkie_big_nohaplotig	exon	68404042	68404271	90	+	.	Parent=comp139117_c1_seq1.mrna1;Target=comp139117_c1_seq1 115 341 +
Chr2	stalkie_big_nohaplotig	CDS	68403872	68403967	.	+	0	Parent=comp139117_c1_seq1.mrna1
Chr2	gffcl	locus	68411054	68413132	.	-	.	ID=RLOC_00018233;geneIDs=FBgn0052006.1.path1;transcripts=FBgn0052006.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68411054	68413132	.	-	.	ID=FBgn0052006.1.mrna1;geneID=FBgn0052006.1.path1;Name=FBgn0052006.1;Dir=sensecoverage=100.0;identity=99.8;matches=1778;mismatches=4;indels=0;unknowns=0;locus=RLOC_00018233
Chr2	stalkie_big_nohaplotig	exon	68411054	68411422	99	-	.	Parent=FBgn0052006.1.mrna1;Target=FBgn0052006.1 1414 1782 +
Chr2	stalkie_big_nohaplotig	exon	68411483	68412160	99	-	.	Parent=FBgn0052006.1.mrna1;Target=FBgn0052006.1 736 1413 +
Chr2	stalkie_big_nohaplotig	exon	68412219	68412402	100	-	.	Parent=FBgn0052006.1.mrna1;Target=FBgn0052006.1 552 735 +
Chr2	stalkie_big_nohaplotig	exon	68412582	68413132	100	-	.	Parent=FBgn0052006.1.mrna1;Target=FBgn0052006.1 1 551 +
Chr2	stalkie_big_nohaplotig	CDS	68411054	68411422	.	-	0	Parent=FBgn0052006.1.mrna1;Target=FBgn0052006.1 1414 1782 +
Chr2	stalkie_big_nohaplotig	CDS	68411483	68412160	.	-	0	Parent=FBgn0052006.1.mrna1;Target=FBgn0052006.1 736 1413 +
Chr2	stalkie_big_nohaplotig	CDS	68412219	68412402	.	-	1	Parent=FBgn0052006.1.mrna1;Target=FBgn0052006.1 552 735 +
Chr2	stalkie_big_nohaplotig	CDS	68412582	68413132	.	-	0	Parent=FBgn0052006.1.mrna1;Target=FBgn0052006.1 1 551 +
Chr2	gffcl	locus	68414727	68415735	.	+	.	ID=RLOC_00018234;geneIDs=comp138107_c0_seq1.path1;transcripts=comp138107_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68414727	68415735	.	+	.	ID=comp138107_c0_seq1.mrna1;geneID=comp138107_c0_seq1.path1;Name=comp138107_c0_seq1;Dir=sensecoverage=100.0;identity=96.9;matches=760;mismatches=12;indels=12;unknowns=0;locus=RLOC_00018234
Chr2	stalkie_big_nohaplotig	exon	68414727	68415023	99	+	.	Parent=comp138107_c0_seq1.mrna1;Target=comp138107_c0_seq1 1 297 +
Chr2	stalkie_big_nohaplotig	exon	68415192	68415361	99	+	.	Parent=comp138107_c0_seq1.mrna1;Target=comp138107_c0_seq1 298 466 +
Chr2	stalkie_big_nohaplotig	exon	68415430	68415735	93	+	.	Parent=comp138107_c0_seq1.mrna1;Target=comp138107_c0_seq1 467 783 +
Chr2	stalkie_big_nohaplotig	CDS	68415347	68415361	.	+	0	Parent=comp138107_c0_seq1.mrna1;Target=comp138107_c0_seq1 452 466 +
Chr2	stalkie_big_nohaplotig	CDS	68415430	68415495	.	+	0	Parent=comp138107_c0_seq1.mrna1;Target=comp138107_c0_seq1 467 532 +
Chr2	gffcl	locus	68437298	68438006	.	+	.	ID=RLOC_00018235;geneIDs=comp119021_c0_seq1.path1;transcripts=comp119021_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68437298	68438006	.	+	.	ID=comp119021_c0_seq1.mrna1;geneID=comp119021_c0_seq1.path1;Name=comp119021_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=707;mismatches=2;indels=0;unknowns=0;Target=comp119021_c0_seq1 709 1 .;CDS_Target=comp119021_c0_seq1 427 116 .;locus=RLOC_00018235
Chr2	stalkie_big_nohaplotig	exon	68437298	68438006	99	+	.	Parent=comp119021_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68437413	68437724	.	+	0	Parent=comp119021_c0_seq1.mrna1
Chr2	gffcl	locus	68443169	68461155	.	-	.	ID=RLOC_00018236;geneIDs=FBgn0053978.1.path1;transcripts=FBgn0053978.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68443169	68461155	.	-	.	ID=FBgn0053978.1.mrna1;geneID=FBgn0053978.1.path1;Name=FBgn0053978.1;Dir=sensecoverage=100.0;identity=99.9;matches=4766;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018236
Chr2	stalkie_big_nohaplotig	exon	68443169	68447711	99	-	.	Parent=FBgn0053978.1.mrna1;Target=FBgn0053978.1 227 4769 +
Chr2	stalkie_big_nohaplotig	exon	68452730	68452780	100	-	.	Parent=FBgn0053978.1.mrna1;Target=FBgn0053978.1 176 226 +
Chr2	stalkie_big_nohaplotig	exon	68460981	68461155	99	-	.	Parent=FBgn0053978.1.mrna1;Target=FBgn0053978.1 1 175 +
Chr2	stalkie_big_nohaplotig	CDS	68443171	68447711	.	-	2	Parent=FBgn0053978.1.mrna1;Target=FBgn0053978.1 227 4767 +
Chr2	stalkie_big_nohaplotig	CDS	68452730	68452780	.	-	2	Parent=FBgn0053978.1.mrna1;Target=FBgn0053978.1 176 226 +
Chr2	stalkie_big_nohaplotig	CDS	68460981	68461155	.	-	0	Parent=FBgn0053978.1.mrna1;Target=FBgn0053978.1 1 175 +
Chr2	gffcl	locus	68485818	68582525	.	-	.	ID=RLOC_00018237;geneIDs=FBgn0052000.1.path1;transcripts=FBgn0052000.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68485818	68582525	.	-	.	ID=FBgn0052000.1.mrna1;geneID=FBgn0052000.1.path1;Name=FBgn0052000.1;Dir=sensecoverage=100.0;identity=99.9;matches=4556;mismatches=4;indels=0;unknowns=0;locus=RLOC_00018237
Chr2	stalkie_big_nohaplotig	exon	68485818	68486461	100	-	.	Parent=FBgn0052000.1.mrna1;Target=FBgn0052000.1 3917 4560 +
Chr2	stalkie_big_nohaplotig	exon	68486520	68488046	100	-	.	Parent=FBgn0052000.1.mrna1;Target=FBgn0052000.1 2390 3916 +
Chr2	stalkie_big_nohaplotig	exon	68488107	68488398	99	-	.	Parent=FBgn0052000.1.mrna1;Target=FBgn0052000.1 2098 2389 +
Chr2	stalkie_big_nohaplotig	exon	68488467	68488667	99	-	.	Parent=FBgn0052000.1.mrna1;Target=FBgn0052000.1 1897 2097 +
Chr2	stalkie_big_nohaplotig	exon	68488784	68489088	100	-	.	Parent=FBgn0052000.1.mrna1;Target=FBgn0052000.1 1592 1896 +
Chr2	stalkie_big_nohaplotig	exon	68497131	68497329	98	-	.	Parent=FBgn0052000.1.mrna1;Target=FBgn0052000.1 1393 1591 +
Chr2	stalkie_big_nohaplotig	exon	68497386	68497747	100	-	.	Parent=FBgn0052000.1.mrna1;Target=FBgn0052000.1 1031 1392 +
Chr2	stalkie_big_nohaplotig	exon	68497812	68497927	100	-	.	Parent=FBgn0052000.1.mrna1;Target=FBgn0052000.1 915 1030 +
Chr2	stalkie_big_nohaplotig	exon	68568522	68568810	100	-	.	Parent=FBgn0052000.1.mrna1;Target=FBgn0052000.1 626 914 +
Chr2	stalkie_big_nohaplotig	exon	68581901	68582525	100	-	.	Parent=FBgn0052000.1.mrna1;Target=FBgn0052000.1 1 625 +
Chr2	stalkie_big_nohaplotig	CDS	68485818	68486461	.	-	2	Parent=FBgn0052000.1.mrna1;Target=FBgn0052000.1 3917 4560 +
Chr2	stalkie_big_nohaplotig	CDS	68486520	68488046	.	-	2	Parent=FBgn0052000.1.mrna1;Target=FBgn0052000.1 2390 3916 +
Chr2	stalkie_big_nohaplotig	CDS	68488107	68488398	.	-	0	Parent=FBgn0052000.1.mrna1;Target=FBgn0052000.1 2098 2389 +
Chr2	stalkie_big_nohaplotig	CDS	68488467	68488667	.	-	0	Parent=FBgn0052000.1.mrna1;Target=FBgn0052000.1 1897 2097 +
Chr2	stalkie_big_nohaplotig	CDS	68488784	68489088	.	-	2	Parent=FBgn0052000.1.mrna1;Target=FBgn0052000.1 1592 1896 +
Chr2	stalkie_big_nohaplotig	CDS	68497131	68497329	.	-	0	Parent=FBgn0052000.1.mrna1;Target=FBgn0052000.1 1393 1591 +
Chr2	stalkie_big_nohaplotig	CDS	68497386	68497747	.	-	2	Parent=FBgn0052000.1.mrna1;Target=FBgn0052000.1 1031 1392 +
Chr2	stalkie_big_nohaplotig	CDS	68497812	68497927	.	-	1	Parent=FBgn0052000.1.mrna1;Target=FBgn0052000.1 915 1030 +
Chr2	stalkie_big_nohaplotig	CDS	68568522	68568810	.	-	2	Parent=FBgn0052000.1.mrna1;Target=FBgn0052000.1 626 914 +
Chr2	stalkie_big_nohaplotig	CDS	68581901	68582525	.	-	0	Parent=FBgn0052000.1.mrna1;Target=FBgn0052000.1 1 625 +
Chr2	gffcl	locus	68495694	70489182	.	+	.	ID=RLOC_00018238;geneIDs=comp41626_c0_seq1.path1;transcripts=comp41626_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68495694	70489182	.	+	.	ID=comp41626_c0_seq1.mrna1;geneID=comp41626_c0_seq1.path1;Name=comp41626_c0_seq1;Dir=indeterminatecoverage=97.0;identity=89.5;matches=315;mismatches=6;indels=31;unknowns=0;Target=comp41626_c0_seq1 100 11 .;locus=RLOC_00018238
Chr2	stalkie_big_nohaplotig	exon	68495694	68495954	87	+	.	Parent=comp41626_c0_seq1.mrna1;Target=comp41626_c0_seq1 301 10 .
Chr2	stalkie_big_nohaplotig	exon	70462171	70462172	100	+	.	Parent=comp41626_c0_seq1.mrna1;Target=comp41626_c0_seq1 303 302 .
Chr2	stalkie_big_nohaplotig	exon	70469751	70469758	100	+	.	Parent=comp41626_c0_seq1.mrna1;Target=comp41626_c0_seq1 311 304 .
Chr2	stalkie_big_nohaplotig	exon	70475099	70475105	100	+	.	Parent=comp41626_c0_seq1.mrna1;Target=comp41626_c0_seq1 318 312 .
Chr2	stalkie_big_nohaplotig	exon	70475472	70475474	100	+	.	Parent=comp41626_c0_seq1.mrna1;Target=comp41626_c0_seq1 321 319 .
Chr2	stalkie_big_nohaplotig	exon	70478532	70478535	100	+	.	Parent=comp41626_c0_seq1.mrna1;Target=comp41626_c0_seq1 325 322 .
Chr2	stalkie_big_nohaplotig	exon	70481693	70481700	100	+	.	Parent=comp41626_c0_seq1.mrna1;Target=comp41626_c0_seq1 333 326 .
Chr2	stalkie_big_nohaplotig	exon	70486292	70486300	100	+	.	Parent=comp41626_c0_seq1.mrna1;Target=comp41626_c0_seq1 342 334 .
Chr2	stalkie_big_nohaplotig	exon	70487237	70487239	100	+	.	Parent=comp41626_c0_seq1.mrna1;Target=comp41626_c0_seq1 345 343 .
Chr2	stalkie_big_nohaplotig	exon	70489167	70489182	100	+	.	Parent=comp41626_c0_seq1.mrna1;Target=comp41626_c0_seq1 361 346 .
Chr2	stalkie_big_nohaplotig	CDS	68495695	68495784	.	+	0	Parent=comp41626_c0_seq1.mrna1
Chr2	gffcl	locus	68500411	68501202	.	-	.	ID=RLOC_00018239;geneIDs=comp162944_c4_seq1.path1;transcripts=comp162944_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68500411	68501202	.	-	.	ID=comp162944_c4_seq1.mrna1;geneID=comp162944_c4_seq1.path1;Name=comp162944_c4_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=785;mismatches=5;indels=2;unknowns=0;Target=comp162944_c4_seq1 790 1 .;CDS_Target=comp162944_c4_seq1 751 674 .;locus=RLOC_00018239
Chr2	stalkie_big_nohaplotig	exon	68500411	68501202	99	-	.	Parent=comp162944_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68500452	68500529	.	-	0	Parent=comp162944_c4_seq1.mrna1
Chr2	gffcl	locus	68534193	68534557	.	-	.	ID=RLOC_00018240;geneIDs=comp135715_c0_seq1.path1;transcripts=comp135715_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68534193	68534557	.	-	.	ID=comp135715_c0_seq1.mrna1;geneID=comp135715_c0_seq1.path1;Name=comp135715_c0_seq1;Dir=indeterminatecoverage=95.5;identity=99.2;matches=362;mismatches=3;indels=0;unknowns=0;Target=comp135715_c0_seq1 379 15 .;CDS_Target=comp135715_c0_seq1 212 147 .;locus=RLOC_00018240
Chr2	stalkie_big_nohaplotig	exon	68534193	68534557	99	-	.	Parent=comp135715_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68534360	68534425	.	-	0	Parent=comp135715_c0_seq1.mrna1
Chr2	gffcl	locus	68552171	68563943	.	+	.	ID=RLOC_00018241;geneIDs=FBgn0011642.1.path1;transcripts=FBgn0011642.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68552171	68563943	.	+	.	ID=FBgn0011642.1.mrna1;geneID=FBgn0011642.1.path1;Name=FBgn0011642.1;Dir=sensecoverage=71.1;identity=99.6;matches=1466;mismatches=6;indels=0;unknowns=0;locus=RLOC_00018241
Chr2	stalkie_big_nohaplotig	exon	68552171	68552398	100	+	.	Parent=FBgn0011642.1.mrna1;Target=FBgn0011642.1 1 228 +
Chr2	stalkie_big_nohaplotig	exon	68552602	68553130	98	+	.	Parent=FBgn0011642.1.mrna1;Target=FBgn0011642.1 229 757 +
Chr2	stalkie_big_nohaplotig	exon	68553897	68554228	100	+	.	Parent=FBgn0011642.1.mrna1;Target=FBgn0011642.1 758 1089 +
Chr2	stalkie_big_nohaplotig	exon	68554294	68554344	100	+	.	Parent=FBgn0011642.1.mrna1;Target=FBgn0011642.1 1090 1140 +
Chr2	stalkie_big_nohaplotig	exon	68563612	68563943	100	+	.	Parent=FBgn0011642.1.mrna1;Target=FBgn0011642.1 1141 1472 +
Chr2	stalkie_big_nohaplotig	CDS	68552171	68552398	.	+	0	Parent=FBgn0011642.1.mrna1;Target=FBgn0011642.1 1 228 +
Chr2	stalkie_big_nohaplotig	CDS	68552602	68553130	.	+	0	Parent=FBgn0011642.1.mrna1;Target=FBgn0011642.1 229 757 +
Chr2	stalkie_big_nohaplotig	CDS	68553897	68554228	.	+	2	Parent=FBgn0011642.1.mrna1;Target=FBgn0011642.1 758 1089 +
Chr2	stalkie_big_nohaplotig	CDS	68554294	68554344	.	+	0	Parent=FBgn0011642.1.mrna1;Target=FBgn0011642.1 1090 1140 +
Chr2	stalkie_big_nohaplotig	CDS	68563612	68563941	.	+	0	Parent=FBgn0011642.1.mrna1;Target=FBgn0011642.1 1141 1470 +
Chr2	gffcl	locus	68573056	68574465	.	+	.	ID=RLOC_00018242;geneIDs=comp160169_c0_seq1.path1;transcripts=comp160169_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68573056	68574465	.	+	.	ID=comp160169_c0_seq1.mrna1;geneID=comp160169_c0_seq1.path1;Name=comp160169_c0_seq1;Dir=indeterminatecoverage=99.1;identity=97.2;matches=1374;mismatches=36;indels=4;unknowns=0;Target=comp160169_c0_seq1 1415 2 .;CDS_Target=comp160169_c0_seq1 302 75 .;locus=RLOC_00018242
Chr2	stalkie_big_nohaplotig	exon	68573056	68574465	97	+	.	Parent=comp160169_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68573129	68573356	.	+	0	Parent=comp160169_c0_seq1.mrna1
Chr2	gffcl	locus	68577638	68578440	.	+	.	ID=RLOC_00018243;geneIDs=comp155991_c0_seq1.path1;transcripts=comp155991_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68577638	68578440	.	+	.	ID=comp155991_c0_seq1.mrna1;geneID=comp155991_c0_seq1.path1;Name=comp155991_c0_seq1;Dir=indeterminatecoverage=97.3;identity=99.3;matches=797;mismatches=6;indels=0;unknowns=0;Target=comp155991_c0_seq1 822 20 .;CDS_Target=comp155991_c0_seq1 239 138 .;locus=RLOC_00018243
Chr2	stalkie_big_nohaplotig	exon	68577638	68578440	99	+	.	Parent=comp155991_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68577756	68577857	.	+	0	Parent=comp155991_c0_seq1.mrna1
Chr2	gffcl	locus	68598038	68599481	.	-	.	ID=RLOC_00018244;geneIDs=comp160002_c0_seq1.path1;transcripts=comp160002_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68598038	68599481	.	-	.	ID=comp160002_c0_seq1.mrna1;geneID=comp160002_c0_seq1.path1;Name=comp160002_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=1437;mismatches=7;indels=21;unknowns=0;Target=comp160002_c0_seq1 1465 1 .;CDS_Target=comp160002_c0_seq1 436 308 .;locus=RLOC_00018244
Chr2	stalkie_big_nohaplotig	exon	68598038	68599481	98	-	.	Parent=comp160002_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68599063	68599191	.	-	0	Parent=comp160002_c0_seq1.mrna1
Chr2	gffcl	locus	68621041	68622101	.	+	.	ID=RLOC_00018245;geneIDs=comp142878_c1_seq1.path1;transcripts=comp142878_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68621041	68622101	.	+	.	ID=comp142878_c1_seq1.mrna1;geneID=comp142878_c1_seq1.path1;Name=comp142878_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1059;mismatches=2;indels=0;unknowns=0;Target=comp142878_c1_seq1 1061 1 .;CDS_Target=comp142878_c1_seq1 498 325 .;locus=RLOC_00018245
Chr2	stalkie_big_nohaplotig	exon	68621041	68622101	99	+	.	Parent=comp142878_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68621365	68621538	.	+	0	Parent=comp142878_c1_seq1.mrna1
Chr2	gffcl	locus	68625134	68626137	.	-	.	ID=RLOC_00018246;geneIDs=FBgn0052850.1.path1;transcripts=FBgn0052850.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68625134	68626137	.	-	.	ID=FBgn0052850.1.mrna1;geneID=FBgn0052850.1.path1;Name=FBgn0052850.1;Dir=sensecoverage=100.0;identity=100.0;matches=459;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018246
Chr2	stalkie_big_nohaplotig	exon	68625134	68625333	100	-	.	Parent=FBgn0052850.1.mrna1;Target=FBgn0052850.1 260 459 +
Chr2	stalkie_big_nohaplotig	exon	68625664	68625784	100	-	.	Parent=FBgn0052850.1.mrna1;Target=FBgn0052850.1 139 259 +
Chr2	stalkie_big_nohaplotig	exon	68626000	68626137	100	-	.	Parent=FBgn0052850.1.mrna1;Target=FBgn0052850.1 1 138 +
Chr2	stalkie_big_nohaplotig	CDS	68625134	68625333	.	-	2	Parent=FBgn0052850.1.mrna1;Target=FBgn0052850.1 260 459 +
Chr2	stalkie_big_nohaplotig	CDS	68625664	68625784	.	-	0	Parent=FBgn0052850.1.mrna1;Target=FBgn0052850.1 139 259 +
Chr2	stalkie_big_nohaplotig	CDS	68626000	68626137	.	-	0	Parent=FBgn0052850.1.mrna1;Target=FBgn0052850.1 1 138 +
Chr2	gffcl	locus	68632356	68636666	.	-	.	ID=RLOC_00018247;geneIDs=FBgn0013749.1.path1,comp158339_c0_seq1.path1;transcripts=FBgn0013749.1.mrna1,comp158339_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68632356	68636666	.	-	.	ID=FBgn0013749.1.mrna1;geneID=FBgn0013749.1.path1;Name=FBgn0013749.1;Dir=sensecoverage=100.0;identity=99.8;matches=512;mismatches=0;indels=1;unknowns=0;locus=RLOC_00018247
Chr2	stalkie_big_nohaplotig	exon	68632356	68632439	100	-	.	Parent=FBgn0013749.1.mrna1;Target=FBgn0013749.1 430 513 +
Chr2	stalkie_big_nohaplotig	exon	68635894	68636019	100	-	.	Parent=FBgn0013749.1.mrna1;Target=FBgn0013749.1 304 429 +
Chr2	stalkie_big_nohaplotig	exon	68636072	68636334	100	-	.	Parent=FBgn0013749.1.mrna1;Target=FBgn0013749.1 41 303 +
Chr2	stalkie_big_nohaplotig	exon	68636628	68636666	97	-	.	Parent=FBgn0013749.1.mrna1;Target=FBgn0013749.1 1 40 +
Chr2	stalkie_big_nohaplotig	CDS	68636247	68636334	.	-	2	Parent=FBgn0013749.1.mrna1;Target=FBgn0013749.1 41 128 +
Chr2	stalkie_big_nohaplotig	CDS	68636628	68636664	.	-	0	Parent=FBgn0013749.1.mrna1;Target=FBgn0013749.1 3 40 +
Chr2	stalkie_big_nohaplotig	mRNA	68632417	68635133	.	-	.	ID=comp158339_c0_seq1.mrna1;geneID=comp158339_c0_seq1.path1;Name=comp158339_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=2686;mismatches=18;indels=33;unknowns=0;Target=comp158339_c0_seq1 2724 1 .;CDS_Target=comp158339_c0_seq1 1402 1250 .;locus=RLOC_00018247
Chr2	stalkie_big_nohaplotig	exon	68632417	68635133	98	-	.	Parent=comp158339_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68633751	68633884	.	-	0	Parent=comp158339_c0_seq1.mrna1
Chr2	gffcl	locus	68648721	68649363	.	+	.	ID=RLOC_00018248;geneIDs=comp276653_c0_seq1.path1;transcripts=comp276653_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68648721	68649363	.	+	.	ID=comp276653_c0_seq1.mrna1;geneID=comp276653_c0_seq1.path1;Name=comp276653_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=643;mismatches=0;indels=0;unknowns=0;Target=comp276653_c0_seq1 643 1 .;CDS_Target=comp276653_c0_seq1 53 3 .;locus=RLOC_00018248
Chr2	stalkie_big_nohaplotig	exon	68648721	68649363	100	+	.	Parent=comp276653_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68648723	68648773	.	+	0	Parent=comp276653_c0_seq1.mrna1
Chr2	gffcl	locus	68650744	68671369	.	-	.	ID=RLOC_00018249;geneIDs=FBgn0262636.path1,comp156205_c1_seq1.path1;transcripts=comp156205_c1_seq1.mrna1,FBgn0262636.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68650744	68671369	.	-	.	ID=comp156205_c1_seq1.mrna1;geneID=comp156205_c1_seq1.path1;Name=comp156205_c1_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=2039;mismatches=3;indels=3;unknowns=0;locus=RLOC_00018249
Chr2	stalkie_big_nohaplotig	exon	68650744	68651064	100	-	.	Parent=comp156205_c1_seq1.mrna1;Target=comp156205_c1_seq1 1722 2042 +
Chr2	stalkie_big_nohaplotig	exon	68651126	68651353	100	-	.	Parent=comp156205_c1_seq1.mrna1;Target=comp156205_c1_seq1 1494 1721 +
Chr2	stalkie_big_nohaplotig	exon	68651860	68652022	100	-	.	Parent=comp156205_c1_seq1.mrna1;Target=comp156205_c1_seq1 1331 1493 +
Chr2	stalkie_big_nohaplotig	exon	68653052	68653236	99	-	.	Parent=comp156205_c1_seq1.mrna1;Target=comp156205_c1_seq1 1146 1330 +
Chr2	stalkie_big_nohaplotig	exon	68662200	68662455	100	-	.	Parent=comp156205_c1_seq1.mrna1;Target=comp156205_c1_seq1 890 1145 +
Chr2	stalkie_big_nohaplotig	exon	68667254	68667355	100	-	.	Parent=comp156205_c1_seq1.mrna1;Target=comp156205_c1_seq1 788 889 +
Chr2	stalkie_big_nohaplotig	exon	68670580	68671369	99	-	.	Parent=comp156205_c1_seq1.mrna1;Target=comp156205_c1_seq1 1 787 +
Chr2	stalkie_big_nohaplotig	CDS	68650745	68651064	.	-	2	Parent=comp156205_c1_seq1.mrna1;Target=comp156205_c1_seq1 1722 2041 +
Chr2	stalkie_big_nohaplotig	CDS	68651126	68651353	.	-	2	Parent=comp156205_c1_seq1.mrna1;Target=comp156205_c1_seq1 1494 1721 +
Chr2	stalkie_big_nohaplotig	CDS	68651860	68652022	.	-	0	Parent=comp156205_c1_seq1.mrna1;Target=comp156205_c1_seq1 1331 1493 +
Chr2	stalkie_big_nohaplotig	CDS	68653052	68653236	.	-	2	Parent=comp156205_c1_seq1.mrna1;Target=comp156205_c1_seq1 1146 1330 +
Chr2	stalkie_big_nohaplotig	CDS	68662200	68662455	.	-	0	Parent=comp156205_c1_seq1.mrna1;Target=comp156205_c1_seq1 890 1145 +
Chr2	stalkie_big_nohaplotig	CDS	68667254	68667355	.	-	0	Parent=comp156205_c1_seq1.mrna1;Target=comp156205_c1_seq1 788 889 +
Chr2	stalkie_big_nohaplotig	CDS	68670580	68671368	.	-	0	Parent=comp156205_c1_seq1.mrna1;Target=comp156205_c1_seq1 2 787 +
Chr2	stalkie_big_nohaplotig	mRNA	68650745	68671368	.	-	.	ID=FBgn0262636.mrna1;geneID=FBgn0262636.path1;Name=FBgn0262636;Dir=sensecoverage=100.0;identity=99.7;matches=2013;mismatches=3;indels=3;unknowns=0;locus=RLOC_00018249
Chr2	stalkie_big_nohaplotig	exon	68650745	68651064	100	-	.	Parent=FBgn0262636.mrna1;Target=FBgn0262636 1697 2016 +
Chr2	stalkie_big_nohaplotig	exon	68651126	68651353	100	-	.	Parent=FBgn0262636.mrna1;Target=FBgn0262636 1469 1696 +
Chr2	stalkie_big_nohaplotig	exon	68651860	68652022	100	-	.	Parent=FBgn0262636.mrna1;Target=FBgn0262636 1306 1468 +
Chr2	stalkie_big_nohaplotig	exon	68653052	68653236	99	-	.	Parent=FBgn0262636.mrna1;Target=FBgn0262636 1121 1305 +
Chr2	stalkie_big_nohaplotig	exon	68662200	68662455	100	-	.	Parent=FBgn0262636.mrna1;Target=FBgn0262636 865 1120 +
Chr2	stalkie_big_nohaplotig	exon	68667278	68667355	100	-	.	Parent=FBgn0262636.mrna1;Target=FBgn0262636 787 864 +
Chr2	stalkie_big_nohaplotig	exon	68670580	68671368	99	-	.	Parent=FBgn0262636.mrna1;Target=FBgn0262636 1 786 +
Chr2	stalkie_big_nohaplotig	CDS	68650745	68651064	.	-	2	Parent=FBgn0262636.mrna1;Target=FBgn0262636 1697 2016 +
Chr2	stalkie_big_nohaplotig	CDS	68651126	68651353	.	-	2	Parent=FBgn0262636.mrna1;Target=FBgn0262636 1469 1696 +
Chr2	stalkie_big_nohaplotig	CDS	68651860	68652022	.	-	0	Parent=FBgn0262636.mrna1;Target=FBgn0262636 1306 1468 +
Chr2	stalkie_big_nohaplotig	CDS	68653052	68653236	.	-	2	Parent=FBgn0262636.mrna1;Target=FBgn0262636 1121 1305 +
Chr2	stalkie_big_nohaplotig	CDS	68662200	68662455	.	-	0	Parent=FBgn0262636.mrna1;Target=FBgn0262636 865 1120 +
Chr2	stalkie_big_nohaplotig	CDS	68667278	68667355	.	-	0	Parent=FBgn0262636.mrna1;Target=FBgn0262636 787 864 +
Chr2	stalkie_big_nohaplotig	CDS	68670580	68671368	.	-	0	Parent=FBgn0262636.mrna1;Target=FBgn0262636 1 786 +
Chr2	gffcl	locus	68698021	68698687	.	+	.	ID=RLOC_00018250;geneIDs=comp126114_c2_seq1.path1;transcripts=comp126114_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68698021	68698687	.	+	.	ID=comp126114_c2_seq1.mrna1;geneID=comp126114_c2_seq1.path1;Name=comp126114_c2_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=667;mismatches=0;indels=0;unknowns=0;Target=comp126114_c2_seq1 667 1 .;CDS_Target=comp126114_c2_seq1 491 336 .;locus=RLOC_00018250
Chr2	stalkie_big_nohaplotig	exon	68698021	68698687	100	+	.	Parent=comp126114_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68698356	68698511	.	+	0	Parent=comp126114_c2_seq1.mrna1
Chr2	gffcl	locus	68759297	68760866	.	.	.	ID=RLOC_00018251;geneIDs=comp116392_c0_seq1.path1,comp150231_c0_seq1.path1;transcripts=comp150231_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68759847	68760866	.	+	.	ID=comp150231_c0_seq1.mrna1;geneID=comp150231_c0_seq1.path1;Name=comp150231_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1019;mismatches=1;indels=0;unknowns=0;Target=comp150231_c0_seq1 1020 1 .;CDS_Target=comp150231_c0_seq1 581 462 .;locus=RLOC_00018251
Chr2	stalkie_big_nohaplotig	exon	68759847	68760866	99	+	.	Parent=comp150231_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68760308	68760427	.	+	0	Parent=comp150231_c0_seq1.mrna1
Chr2	gffcl	locus	68760928	68761543	.	+	.	ID=RLOC_00018252;geneIDs=comp147427_c0_seq1.path1;transcripts=comp147427_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68760928	68761543	.	+	.	ID=comp147427_c0_seq1.mrna1;geneID=comp147427_c0_seq1.path1;Name=comp147427_c0_seq1;Dir=indeterminatecoverage=96.7;identity=99.8;matches=615;mismatches=1;indels=0;unknowns=0;Target=comp147427_c0_seq1 616 1 .;CDS_Target=comp147427_c0_seq1 311 225 .;locus=RLOC_00018252
Chr2	stalkie_big_nohaplotig	exon	68760928	68761543	99	+	.	Parent=comp147427_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68761152	68761238	.	+	0	Parent=comp147427_c0_seq1.mrna1
Chr2	gffcl	locus	68764221	70386938	.	-	.	ID=RLOC_00018253;geneIDs=Dp_FBgn0250603.path4,comp162537_c0_seq1.path1;transcripts=comp162537_c0_seq1.mrna1,Dp_FBgn0250603.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	68764221	70386938	.	-	.	ID=comp162537_c0_seq1.mrna1;geneID=comp162537_c0_seq1.path1;Name=comp162537_c0_seq1;Dir=indeterminatecoverage=94.7;identity=93.4;matches=1788;mismatches=111;indels=15;unknowns=0;locus=RLOC_00018253
Chr2	stalkie_big_nohaplotig	exon	68764221	68764224	100	-	.	Parent=comp162537_c0_seq1.mrna1;Target=comp162537_c0_seq1 2057 2054 .
Chr2	stalkie_big_nohaplotig	exon	68769610	68769618	100	-	.	Parent=comp162537_c0_seq1.mrna1;Target=comp162537_c0_seq1 2047 2039 .
Chr2	stalkie_big_nohaplotig	exon	68770366	68770368	100	-	.	Parent=comp162537_c0_seq1.mrna1;Target=comp162537_c0_seq1 2038 2036 .
Chr2	stalkie_big_nohaplotig	exon	68770380	68770388	100	-	.	Parent=comp162537_c0_seq1.mrna1;Target=comp162537_c0_seq1 1999 1991 .
Chr2	stalkie_big_nohaplotig	exon	68784789	68784795	100	-	.	Parent=comp162537_c0_seq1.mrna1;Target=comp162537_c0_seq1 1990 1984 .
Chr2	stalkie_big_nohaplotig	exon	68787252	68787259	100	-	.	Parent=comp162537_c0_seq1.mrna1;Target=comp162537_c0_seq1 1983 1976 .
Chr2	stalkie_big_nohaplotig	exon	68808087	68808092	100	-	.	Parent=comp162537_c0_seq1.mrna1;Target=comp162537_c0_seq1 1975 1970 .
Chr2	stalkie_big_nohaplotig	exon	68811743	68811754	100	-	.	Parent=comp162537_c0_seq1.mrna1;Target=comp162537_c0_seq1 1958 1947 .
Chr2	stalkie_big_nohaplotig	exon	68823697	68823704	100	-	.	Parent=comp162537_c0_seq1.mrna1;Target=comp162537_c0_seq1 1946 1939 .
Chr2	stalkie_big_nohaplotig	exon	68846340	68846349	100	-	.	Parent=comp162537_c0_seq1.mrna1;Target=comp162537_c0_seq1 1931 1922 .
Chr2	stalkie_big_nohaplotig	exon	68846377	68846384	100	-	.	Parent=comp162537_c0_seq1.mrna1;Target=comp162537_c0_seq1 1898 1891 .
Chr2	stalkie_big_nohaplotig	exon	68854245	68854247	100	-	.	Parent=comp162537_c0_seq1.mrna1;Target=comp162537_c0_seq1 1890 1888 .
Chr2	stalkie_big_nohaplotig	exon	68862258	68862261	100	-	.	Parent=comp162537_c0_seq1.mrna1;Target=comp162537_c0_seq1 1887 1884 .
Chr2	stalkie_big_nohaplotig	exon	68867955	68867964	100	-	.	Parent=comp162537_c0_seq1.mrna1;Target=comp162537_c0_seq1 1880 1871 .
Chr2	stalkie_big_nohaplotig	exon	68874556	68874564	100	-	.	Parent=comp162537_c0_seq1.mrna1;Target=comp162537_c0_seq1 1867 1859 .
Chr2	stalkie_big_nohaplotig	exon	70380318	70380532	92	-	.	Parent=comp162537_c0_seq1.mrna1;Target=comp162537_c0_seq1 1825 1608 .
Chr2	stalkie_big_nohaplotig	exon	70385367	70386938	93	-	.	Parent=comp162537_c0_seq1.mrna1;Target=comp162537_c0_seq1 1607 24 .
Chr2	stalkie_big_nohaplotig	CDS	70380318	70380532	.	-	0	Parent=comp162537_c0_seq1.mrna1;Target=comp162537_c0_seq1 1825 1608 .
Chr2	stalkie_big_nohaplotig	CDS	70385367	70386209	.	-	0	Parent=comp162537_c0_seq1.mrna1;Target=comp162537_c0_seq1 1607 758 .
Chr2	stalkie_big_nohaplotig	mRNA	68823344	68824054	.	-	.	ID=Dp_FBgn0250603.mrna4;geneID=Dp_FBgn0250603.path4;Name=Dp_FBgn0250603;Dir=indeterminatecoverage=100.0;identity=98.7;matches=702;mismatches=9;indels=0;unknowns=0;Target=Dp_FBgn0250603 711 1 .;locus=RLOC_00018253
Chr2	stalkie_big_nohaplotig	exon	68823344	68824054	98	-	.	Parent=Dp_FBgn0250603.mrna4
Chr2	stalkie_big_nohaplotig	CDS	68823344	68824054	.	-	0	Parent=Dp_FBgn0250603.mrna4
Chr2	gffcl	locus	68764506	68764984	.	+	.	ID=RLOC_00018254;geneIDs=comp151020_c0_seq1.path1;transcripts=comp151020_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68764506	68764984	.	+	.	ID=comp151020_c0_seq1.mrna1;geneID=comp151020_c0_seq1.path1;Name=comp151020_c0_seq1;Dir=indeterminatecoverage=88.6;identity=95.5;matches=462;mismatches=17;indels=5;unknowns=0;Target=comp151020_c0_seq1 546 63 .;CDS_Target=comp151020_c0_seq1 217 65 .;locus=RLOC_00018254
Chr2	stalkie_big_nohaplotig	exon	68764506	68764984	95	+	.	Parent=comp151020_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68764508	68764660	.	+	0	Parent=comp151020_c0_seq1.mrna1
Chr2	gffcl	locus	68774835	68775811	.	-	.	ID=RLOC_00018255;geneIDs=comp107040_c0_seq1.path1;transcripts=comp107040_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68774835	68775811	.	-	.	ID=comp107040_c0_seq1.mrna1;geneID=comp107040_c0_seq1.path1;Name=comp107040_c0_seq1;Dir=sensecoverage=100.0;identity=93.3;matches=614;mismatches=13;indels=31;unknowns=0;Target=comp107040_c0_seq1 1 102 +;locus=RLOC_00018255
Chr2	stalkie_big_nohaplotig	exon	68774835	68775265	94	-	.	Parent=comp107040_c0_seq1.mrna1;Target=comp107040_c0_seq1 215 628 +
Chr2	stalkie_big_nohaplotig	exon	68775586	68775811	91	-	.	Parent=comp107040_c0_seq1.mrna1;Target=comp107040_c0_seq1 1 214 +
Chr2	stalkie_big_nohaplotig	CDS	68775698	68775811	.	-	0	Parent=comp107040_c0_seq1.mrna1
Chr2	gffcl	locus	68791568	68804467	.	-	.	ID=RLOC_00018256;geneIDs=FBgn0039907.1.path1;transcripts=FBgn0039907.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68791568	68804467	.	-	.	ID=FBgn0039907.1.mrna1;geneID=FBgn0039907.1.path1;Name=FBgn0039907.1;Dir=sensecoverage=100.0;identity=99.9;matches=4563;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018256
Chr2	stalkie_big_nohaplotig	exon	68791568	68793073	100	-	.	Parent=FBgn0039907.1.mrna1;Target=FBgn0039907.1 3061 4566 +
Chr2	stalkie_big_nohaplotig	exon	68798499	68798665	99	-	.	Parent=FBgn0039907.1.mrna1;Target=FBgn0039907.1 2894 3060 +
Chr2	stalkie_big_nohaplotig	exon	68798744	68800861	99	-	.	Parent=FBgn0039907.1.mrna1;Target=FBgn0039907.1 776 2893 +
Chr2	stalkie_big_nohaplotig	exon	68803573	68803800	99	-	.	Parent=FBgn0039907.1.mrna1;Target=FBgn0039907.1 548 775 +
Chr2	stalkie_big_nohaplotig	exon	68803861	68804214	100	-	.	Parent=FBgn0039907.1.mrna1;Target=FBgn0039907.1 194 547 +
Chr2	stalkie_big_nohaplotig	exon	68804275	68804467	100	-	.	Parent=FBgn0039907.1.mrna1;Target=FBgn0039907.1 1 193 +
Chr2	stalkie_big_nohaplotig	CDS	68791568	68793073	.	-	0	Parent=FBgn0039907.1.mrna1;Target=FBgn0039907.1 3061 4566 +
Chr2	stalkie_big_nohaplotig	CDS	68798499	68798665	.	-	2	Parent=FBgn0039907.1.mrna1;Target=FBgn0039907.1 2894 3060 +
Chr2	stalkie_big_nohaplotig	CDS	68798744	68800861	.	-	2	Parent=FBgn0039907.1.mrna1;Target=FBgn0039907.1 776 2893 +
Chr2	stalkie_big_nohaplotig	CDS	68803573	68803800	.	-	2	Parent=FBgn0039907.1.mrna1;Target=FBgn0039907.1 548 775 +
Chr2	stalkie_big_nohaplotig	CDS	68803861	68804214	.	-	2	Parent=FBgn0039907.1.mrna1;Target=FBgn0039907.1 194 547 +
Chr2	stalkie_big_nohaplotig	CDS	68804275	68804467	.	-	0	Parent=FBgn0039907.1.mrna1;Target=FBgn0039907.1 1 193 +
Chr2	gffcl	locus	68841120	68875472	.	-	.	ID=RLOC_00018257;geneIDs=FBgn0039915.1.path1;transcripts=FBgn0039915.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68841120	68875472	.	-	.	ID=FBgn0039915.1.mrna1;geneID=FBgn0039915.1.path1;Name=FBgn0039915.1;Dir=sensecoverage=100.0;identity=100.0;matches=1971;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018257
Chr2	stalkie_big_nohaplotig	exon	68841120	68841206	100	-	.	Parent=FBgn0039915.1.mrna1;Target=FBgn0039915.1 1885 1971 +
Chr2	stalkie_big_nohaplotig	exon	68841267	68841434	100	-	.	Parent=FBgn0039915.1.mrna1;Target=FBgn0039915.1 1717 1884 +
Chr2	stalkie_big_nohaplotig	exon	68841497	68841700	100	-	.	Parent=FBgn0039915.1.mrna1;Target=FBgn0039915.1 1513 1716 +
Chr2	stalkie_big_nohaplotig	exon	68841811	68842055	100	-	.	Parent=FBgn0039915.1.mrna1;Target=FBgn0039915.1 1268 1512 +
Chr2	stalkie_big_nohaplotig	exon	68845193	68845317	100	-	.	Parent=FBgn0039915.1.mrna1;Target=FBgn0039915.1 1143 1267 +
Chr2	stalkie_big_nohaplotig	exon	68845377	68845480	100	-	.	Parent=FBgn0039915.1.mrna1;Target=FBgn0039915.1 1039 1142 +
Chr2	stalkie_big_nohaplotig	exon	68845533	68845800	100	-	.	Parent=FBgn0039915.1.mrna1;Target=FBgn0039915.1 771 1038 +
Chr2	stalkie_big_nohaplotig	exon	68863773	68863953	100	-	.	Parent=FBgn0039915.1.mrna1;Target=FBgn0039915.1 590 770 +
Chr2	stalkie_big_nohaplotig	exon	68864005	68864106	100	-	.	Parent=FBgn0039915.1.mrna1;Target=FBgn0039915.1 488 589 +
Chr2	stalkie_big_nohaplotig	exon	68864172	68864439	100	-	.	Parent=FBgn0039915.1.mrna1;Target=FBgn0039915.1 220 487 +
Chr2	stalkie_big_nohaplotig	exon	68875254	68875472	100	-	.	Parent=FBgn0039915.1.mrna1;Target=FBgn0039915.1 1 219 +
Chr2	stalkie_big_nohaplotig	CDS	68841120	68841206	.	-	0	Parent=FBgn0039915.1.mrna1;Target=FBgn0039915.1 1885 1971 +
Chr2	stalkie_big_nohaplotig	CDS	68841267	68841434	.	-	0	Parent=FBgn0039915.1.mrna1;Target=FBgn0039915.1 1717 1884 +
Chr2	stalkie_big_nohaplotig	CDS	68841497	68841700	.	-	0	Parent=FBgn0039915.1.mrna1;Target=FBgn0039915.1 1513 1716 +
Chr2	stalkie_big_nohaplotig	CDS	68841811	68842055	.	-	2	Parent=FBgn0039915.1.mrna1;Target=FBgn0039915.1 1268 1512 +
Chr2	stalkie_big_nohaplotig	CDS	68845193	68845317	.	-	1	Parent=FBgn0039915.1.mrna1;Target=FBgn0039915.1 1143 1267 +
Chr2	stalkie_big_nohaplotig	CDS	68845377	68845480	.	-	0	Parent=FBgn0039915.1.mrna1;Target=FBgn0039915.1 1039 1142 +
Chr2	stalkie_big_nohaplotig	CDS	68845533	68845800	.	-	1	Parent=FBgn0039915.1.mrna1;Target=FBgn0039915.1 771 1038 +
Chr2	stalkie_big_nohaplotig	CDS	68863773	68863953	.	-	2	Parent=FBgn0039915.1.mrna1;Target=FBgn0039915.1 590 770 +
Chr2	stalkie_big_nohaplotig	CDS	68864005	68864106	.	-	2	Parent=FBgn0039915.1.mrna1;Target=FBgn0039915.1 488 589 +
Chr2	stalkie_big_nohaplotig	CDS	68864172	68864439	.	-	0	Parent=FBgn0039915.1.mrna1;Target=FBgn0039915.1 220 487 +
Chr2	stalkie_big_nohaplotig	CDS	68875254	68875472	.	-	0	Parent=FBgn0039915.1.mrna1;Target=FBgn0039915.1 1 219 +
Chr2	gffcl	locus	68875830	68876528	.	+	.	ID=RLOC_00018258;geneIDs=comp151623_c0_seq1.path1;transcripts=comp151623_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68875830	68876528	.	+	.	ID=comp151623_c0_seq1.mrna1;geneID=comp151623_c0_seq1.path1;Name=comp151623_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=676;mismatches=9;indels=14;unknowns=0;Target=comp151623_c0_seq1 685 1 .;CDS_Target=comp151623_c0_seq1 485 333 .;locus=RLOC_00018258
Chr2	stalkie_big_nohaplotig	exon	68875830	68876528	96	+	.	Parent=comp151623_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68876162	68876328	.	+	0	Parent=comp151623_c0_seq1.mrna1
Chr2	gffcl	locus	68911148	68912281	.	+	.	ID=RLOC_00018259;geneIDs=comp163184_c7_seq1.path2;transcripts=comp163184_c7_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	68911148	68912281	.	+	.	ID=comp163184_c7_seq1.mrna2;geneID=comp163184_c7_seq1.path2;Name=comp163184_c7_seq1;Dir=indeterminatecoverage=36.9;identity=99.9;matches=1133;mismatches=1;indels=0;unknowns=0;Target=comp163184_c7_seq1 3072 1939 .;CDS_Target=comp163184_c7_seq1 2057 1939 .;locus=RLOC_00018259
Chr2	stalkie_big_nohaplotig	exon	68911148	68912281	99	+	.	Parent=comp163184_c7_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	68911148	68911266	.	+	1	Parent=comp163184_c7_seq1.mrna2
Chr2	gffcl	locus	68930352	68983721	.	-	.	ID=RLOC_00018260;geneIDs=FBgn0032704.path1,FBgn0042696.1.path1,comp146084_c0_seq1.path1,comp147605_c0_seq1.path1,comp158750_c2_seq1.path1;transcripts=comp158750_c2_seq1.mrna1,FBgn0042696.1.mrna1,comp146084_c0_seq1.mrna1,FBgn0032704.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68930352	68982707	.	-	.	ID=comp158750_c2_seq1.mrna1;geneID=comp158750_c2_seq1.path1;Name=comp158750_c2_seq1;Dir=antisensecoverage=99.4;identity=100.0;matches=5226;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018260
Chr2	stalkie_big_nohaplotig	exon	68930352	68931350	100	-	.	Parent=comp158750_c2_seq1.mrna1;Target=comp158750_c2_seq1 17 1015 -
Chr2	stalkie_big_nohaplotig	exon	68938815	68939047	100	-	.	Parent=comp158750_c2_seq1.mrna1;Target=comp158750_c2_seq1 1016 1248 -
Chr2	stalkie_big_nohaplotig	exon	68939115	68940036	100	-	.	Parent=comp158750_c2_seq1.mrna1;Target=comp158750_c2_seq1 1249 2170 -
Chr2	stalkie_big_nohaplotig	exon	68940092	68940355	99	-	.	Parent=comp158750_c2_seq1.mrna1;Target=comp158750_c2_seq1 2171 2434 -
Chr2	stalkie_big_nohaplotig	exon	68945092	68945301	100	-	.	Parent=comp158750_c2_seq1.mrna1;Target=comp158750_c2_seq1 2435 2644 -
Chr2	stalkie_big_nohaplotig	exon	68945372	68945464	100	-	.	Parent=comp158750_c2_seq1.mrna1;Target=comp158750_c2_seq1 2645 2737 -
Chr2	stalkie_big_nohaplotig	exon	68951712	68952258	100	-	.	Parent=comp158750_c2_seq1.mrna1;Target=comp158750_c2_seq1 2738 3284 -
Chr2	stalkie_big_nohaplotig	exon	68952323	68952478	100	-	.	Parent=comp158750_c2_seq1.mrna1;Target=comp158750_c2_seq1 3285 3440 -
Chr2	stalkie_big_nohaplotig	exon	68961297	68961520	100	-	.	Parent=comp158750_c2_seq1.mrna1;Target=comp158750_c2_seq1 3441 3664 -
Chr2	stalkie_big_nohaplotig	exon	68981013	68981249	100	-	.	Parent=comp158750_c2_seq1.mrna1;Target=comp158750_c2_seq1 3665 3901 -
Chr2	stalkie_big_nohaplotig	exon	68981307	68981574	100	-	.	Parent=comp158750_c2_seq1.mrna1;Target=comp158750_c2_seq1 3902 4169 -
Chr2	stalkie_big_nohaplotig	exon	68981634	68982707	100	-	.	Parent=comp158750_c2_seq1.mrna1;Target=comp158750_c2_seq1 4170 5243 -
Chr2	stalkie_big_nohaplotig	CDS	68939231	68940036	.	-	2	Parent=comp158750_c2_seq1.mrna1;Target=comp158750_c2_seq1 1365 2170 .
Chr2	stalkie_big_nohaplotig	CDS	68940092	68940355	.	-	2	Parent=comp158750_c2_seq1.mrna1;Target=comp158750_c2_seq1 2171 2434 .
Chr2	stalkie_big_nohaplotig	CDS	68945092	68945301	.	-	2	Parent=comp158750_c2_seq1.mrna1;Target=comp158750_c2_seq1 2435 2644 .
Chr2	stalkie_big_nohaplotig	CDS	68945372	68945464	.	-	2	Parent=comp158750_c2_seq1.mrna1;Target=comp158750_c2_seq1 2645 2737 .
Chr2	stalkie_big_nohaplotig	CDS	68951712	68952258	.	-	0	Parent=comp158750_c2_seq1.mrna1;Target=comp158750_c2_seq1 2738 3284 .
Chr2	stalkie_big_nohaplotig	CDS	68952323	68952478	.	-	0	Parent=comp158750_c2_seq1.mrna1;Target=comp158750_c2_seq1 3285 3440 .
Chr2	stalkie_big_nohaplotig	CDS	68961297	68961377	.	-	0	Parent=comp158750_c2_seq1.mrna1;Target=comp158750_c2_seq1 3441 3521 .
Chr2	stalkie_big_nohaplotig	mRNA	68931301	68961392	.	-	.	ID=FBgn0042696.1.mrna1;geneID=FBgn0042696.1.path1;Name=FBgn0042696.1;Dir=sensecoverage=100.0;identity=100.0;matches=2438;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018260
Chr2	stalkie_big_nohaplotig	exon	68931301	68931350	100	-	.	Parent=FBgn0042696.1.mrna1;Target=FBgn0042696.1 2390 2439 +
Chr2	stalkie_big_nohaplotig	exon	68938815	68939040	100	-	.	Parent=FBgn0042696.1.mrna1;Target=FBgn0042696.1 2164 2389 +
Chr2	stalkie_big_nohaplotig	exon	68939240	68940036	100	-	.	Parent=FBgn0042696.1.mrna1;Target=FBgn0042696.1 1367 2163 +
Chr2	stalkie_big_nohaplotig	exon	68940092	68940355	99	-	.	Parent=FBgn0042696.1.mrna1;Target=FBgn0042696.1 1103 1366 +
Chr2	stalkie_big_nohaplotig	exon	68945092	68945301	100	-	.	Parent=FBgn0042696.1.mrna1;Target=FBgn0042696.1 893 1102 +
Chr2	stalkie_big_nohaplotig	exon	68945372	68945464	100	-	.	Parent=FBgn0042696.1.mrna1;Target=FBgn0042696.1 800 892 +
Chr2	stalkie_big_nohaplotig	exon	68951712	68952258	100	-	.	Parent=FBgn0042696.1.mrna1;Target=FBgn0042696.1 253 799 +
Chr2	stalkie_big_nohaplotig	exon	68952323	68952478	100	-	.	Parent=FBgn0042696.1.mrna1;Target=FBgn0042696.1 97 252 +
Chr2	stalkie_big_nohaplotig	exon	68961297	68961392	100	-	.	Parent=FBgn0042696.1.mrna1;Target=FBgn0042696.1 1 96 +
Chr2	stalkie_big_nohaplotig	CDS	68931301	68931350	.	-	2	Parent=FBgn0042696.1.mrna1;Target=FBgn0042696.1 2390 2439 +
Chr2	stalkie_big_nohaplotig	CDS	68938815	68939040	.	-	0	Parent=FBgn0042696.1.mrna1;Target=FBgn0042696.1 2164 2389 +
Chr2	stalkie_big_nohaplotig	CDS	68939240	68940036	.	-	2	Parent=FBgn0042696.1.mrna1;Target=FBgn0042696.1 1367 2163 +
Chr2	stalkie_big_nohaplotig	CDS	68940092	68940355	.	-	2	Parent=FBgn0042696.1.mrna1;Target=FBgn0042696.1 1103 1366 +
Chr2	stalkie_big_nohaplotig	CDS	68945092	68945301	.	-	2	Parent=FBgn0042696.1.mrna1;Target=FBgn0042696.1 893 1102 +
Chr2	stalkie_big_nohaplotig	CDS	68945372	68945464	.	-	2	Parent=FBgn0042696.1.mrna1;Target=FBgn0042696.1 800 892 +
Chr2	stalkie_big_nohaplotig	CDS	68951712	68952258	.	-	0	Parent=FBgn0042696.1.mrna1;Target=FBgn0042696.1 253 799 +
Chr2	stalkie_big_nohaplotig	CDS	68952323	68952478	.	-	0	Parent=FBgn0042696.1.mrna1;Target=FBgn0042696.1 97 252 +
Chr2	stalkie_big_nohaplotig	CDS	68961297	68961392	.	-	0	Parent=FBgn0042696.1.mrna1;Target=FBgn0042696.1 1 96 +
Chr2	stalkie_big_nohaplotig	mRNA	68940062	68940115	.	-	.	ID=comp146084_c0_seq1.mrna1;geneID=comp146084_c0_seq1.path1;Name=comp146084_c0_seq1;Dir=indeterminatecoverage=6.3;identity=98.1;matches=53;mismatches=1;indels=0;unknowns=0;Target=comp146084_c0_seq1 54 1 .;locus=RLOC_00018260
Chr2	stalkie_big_nohaplotig	exon	68940062	68940115	98	-	.	Parent=comp146084_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68983132	68983427	.	-	.	ID=FBgn0032704.mrna1;geneID=FBgn0032704.path1;Name=FBgn0032704;Dir=indeterminatecoverage=94.0;identity=100.0;matches=296;mismatches=0;indels=0;unknowns=0;Target=FBgn0032704 296 1 .;CDS_Target=FBgn0032704 294 1 .;locus=RLOC_00018260
Chr2	stalkie_big_nohaplotig	exon	68983132	68983427	100	-	.	Parent=FBgn0032704.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68983134	68983427	.	-	0	Parent=FBgn0032704.mrna1
Chr2	gffcl	locus	68952964	68953444	.	+	.	ID=RLOC_00018261;geneIDs=comp116063_c1_seq1.path1;transcripts=comp116063_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68952964	68953444	.	+	.	ID=comp116063_c1_seq1.mrna1;geneID=comp116063_c1_seq1.path1;Name=comp116063_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=479;mismatches=2;indels=0;unknowns=0;Target=comp116063_c1_seq1 481 1 .;CDS_Target=comp116063_c1_seq1 181 80 .;locus=RLOC_00018261
Chr2	stalkie_big_nohaplotig	exon	68952964	68953444	99	+	.	Parent=comp116063_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68953043	68953144	.	+	0	Parent=comp116063_c1_seq1.mrna1
Chr2	gffcl	locus	68954970	68955227	.	+	.	ID=RLOC_00018262;geneIDs=comp105329_c0_seq1.path1;transcripts=comp105329_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68954970	68955227	.	+	.	ID=comp105329_c0_seq1.mrna1;geneID=comp105329_c0_seq1.path1;Name=comp105329_c0_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=258;mismatches=0;indels=0;unknowns=0;Target=comp105329_c0_seq1 258 1 .;CDS_Target=comp105329_c0_seq1 168 1 .;locus=RLOC_00018262
Chr2	stalkie_big_nohaplotig	exon	68954970	68955227	100	+	.	Parent=comp105329_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68954970	68955137	.	+	0	Parent=comp105329_c0_seq1.mrna1
Chr2	gffcl	locus	68957704	68958993	.	-	.	ID=RLOC_00018263;geneIDs=comp118981_c0_seq1.path1;transcripts=comp118981_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68957704	68958993	.	-	.	ID=comp118981_c0_seq1.mrna1;geneID=comp118981_c0_seq1.path1;Name=comp118981_c0_seq1;Dir=indeterminatecoverage=99.5;identity=100.0;matches=1290;mismatches=0;indels=0;unknowns=0;Target=comp118981_c0_seq1 1296 7 .;CDS_Target=comp118981_c0_seq1 652 512 .;locus=RLOC_00018263
Chr2	stalkie_big_nohaplotig	exon	68957704	68958993	100	-	.	Parent=comp118981_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68958348	68958488	.	-	0	Parent=comp118981_c0_seq1.mrna1
Chr2	gffcl	locus	68959499	68959987	.	-	.	ID=RLOC_00018264;geneIDs=comp150274_c0_seq1.path1;transcripts=comp150274_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	68959499	68959987	.	-	.	ID=comp150274_c0_seq1.mrna1;geneID=comp150274_c0_seq1.path1;Name=comp150274_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.6;matches=487;mismatches=2;indels=0;unknowns=0;Target=comp150274_c0_seq1 489 1 .;CDS_Target=comp150274_c0_seq1 119 60 .;locus=RLOC_00018264
Chr2	stalkie_big_nohaplotig	exon	68959499	68959987	99	-	.	Parent=comp150274_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	68959869	68959928	.	-	0	Parent=comp150274_c0_seq1.mrna1
Chr2	gffcl	locus	69022199	69024224	.	-	.	ID=RLOC_00018265;geneIDs=comp147627_c0_seq1.path1;transcripts=comp147627_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69022199	69024224	.	-	.	ID=comp147627_c0_seq1.mrna1;geneID=comp147627_c0_seq1.path1;Name=comp147627_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=2025;mismatches=1;indels=1;unknowns=0;Target=comp147627_c0_seq1 2030 4 .;CDS_Target=comp147627_c0_seq1 1604 1494 .;locus=RLOC_00018265
Chr2	stalkie_big_nohaplotig	exon	69022199	69024224	99	-	.	Parent=comp147627_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69022625	69022735	.	-	0	Parent=comp147627_c0_seq1.mrna1
Chr2	gffcl	locus	69025399	69025801	.	+	.	ID=RLOC_00018266;geneIDs=comp116732_c1_seq1.path1;transcripts=comp116732_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69025399	69025801	.	+	.	ID=comp116732_c1_seq1.mrna1;geneID=comp116732_c1_seq1.path1;Name=comp116732_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=403;mismatches=0;indels=0;unknowns=0;Target=comp116732_c1_seq1 403 1 .;CDS_Target=comp116732_c1_seq1 64 2 .;locus=RLOC_00018266
Chr2	stalkie_big_nohaplotig	exon	69025399	69025801	100	+	.	Parent=comp116732_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69025400	69025462	.	+	0	Parent=comp116732_c1_seq1.mrna1
Chr2	gffcl	locus	69025958	69026778	.	+	.	ID=RLOC_00018267;geneIDs=comp145517_c0_seq1.path1;transcripts=comp145517_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69025958	69026778	.	+	.	ID=comp145517_c0_seq1.mrna1;geneID=comp145517_c0_seq1.path1;Name=comp145517_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=816;mismatches=5;indels=0;unknowns=0;Target=comp145517_c0_seq1 821 1 .;CDS_Target=comp145517_c0_seq1 117 1 .;locus=RLOC_00018267
Chr2	stalkie_big_nohaplotig	exon	69025958	69026778	99	+	.	Parent=comp145517_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69025958	69026074	.	+	0	Parent=comp145517_c0_seq1.mrna1
Chr2	gffcl	locus	69027550	69030083	.	+	.	ID=RLOC_00018268;geneIDs=comp154099_c0_seq1.path1;transcripts=comp154099_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69027550	69030083	.	+	.	ID=comp154099_c0_seq1.mrna1;geneID=comp154099_c0_seq1.path1;Name=comp154099_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=2525;mismatches=4;indels=7;unknowns=0;Target=comp154099_c0_seq1 2531 1 .;CDS_Target=comp154099_c0_seq1 485 267 .;locus=RLOC_00018268
Chr2	stalkie_big_nohaplotig	exon	69027550	69030083	99	+	.	Parent=comp154099_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69027821	69028039	.	+	0	Parent=comp154099_c0_seq1.mrna1
Chr2	gffcl	locus	69059205	69061426	.	-	.	ID=RLOC_00018269;geneIDs=comp154443_c0_seq1.path1;transcripts=comp154443_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69059205	69061426	.	-	.	ID=comp154443_c0_seq1.mrna1;geneID=comp154443_c0_seq1.path1;Name=comp154443_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2219;mismatches=3;indels=0;unknowns=0;Target=comp154443_c0_seq1 2222 1 .;CDS_Target=comp154443_c0_seq1 884 741 .;locus=RLOC_00018269
Chr2	stalkie_big_nohaplotig	exon	69059205	69061426	99	-	.	Parent=comp154443_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69060543	69060686	.	-	0	Parent=comp154443_c0_seq1.mrna1
Chr2	gffcl	locus	69065465	69068305	.	-	.	ID=RLOC_00018270;geneIDs=comp136786_c0_seq1.path1;transcripts=comp136786_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69065465	69068305	.	-	.	ID=comp136786_c0_seq1.mrna1;geneID=comp136786_c0_seq1.path1;Name=comp136786_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=1847;mismatches=4;indels=1;unknowns=0;Target=comp136786_c0_seq1 478 654 +;locus=RLOC_00018270
Chr2	stalkie_big_nohaplotig	exon	69065465	69065484	100	-	.	Parent=comp136786_c0_seq1.mrna1;Target=comp136786_c0_seq1 1833 1852 +
Chr2	stalkie_big_nohaplotig	exon	69066475	69068305	99	-	.	Parent=comp136786_c0_seq1.mrna1;Target=comp136786_c0_seq1 1 1832 +
Chr2	stalkie_big_nohaplotig	CDS	69067652	69067828	.	-	0	Parent=comp136786_c0_seq1.mrna1
Chr2	gffcl	locus	69071970	69072781	.	-	.	ID=RLOC_00018271;geneIDs=comp50120_c0_seq1.path1;transcripts=comp50120_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69071970	69072781	.	-	.	ID=comp50120_c0_seq1.mrna1;geneID=comp50120_c0_seq1.path1;Name=comp50120_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=414;mismatches=0;indels=0;unknowns=0;Target=comp50120_c0_seq1 3 56 +;locus=RLOC_00018271
Chr2	stalkie_big_nohaplotig	exon	69071970	69071992	100	-	.	Parent=comp50120_c0_seq1.mrna1;Target=comp50120_c0_seq1 392 414 +
Chr2	stalkie_big_nohaplotig	exon	69072391	69072781	100	-	.	Parent=comp50120_c0_seq1.mrna1;Target=comp50120_c0_seq1 1 391 +
Chr2	stalkie_big_nohaplotig	CDS	69072726	69072779	.	-	0	Parent=comp50120_c0_seq1.mrna1
Chr2	gffcl	locus	69144607	69145075	.	-	.	ID=RLOC_00018272;geneIDs=comp143658_c0_seq1.path1;transcripts=comp143658_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69144607	69145075	.	-	.	ID=comp143658_c0_seq1.mrna1;geneID=comp143658_c0_seq1.path1;Name=comp143658_c0_seq1;Dir=indeterminatecoverage=99.6;identity=97.7;matches=461;mismatches=8;indels=3;unknowns=0;Target=comp143658_c0_seq1 473 2 .;CDS_Target=comp143658_c0_seq1 248 171 .;locus=RLOC_00018272
Chr2	stalkie_big_nohaplotig	exon	69144607	69145075	97	-	.	Parent=comp143658_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69144832	69144909	.	-	0	Parent=comp143658_c0_seq1.mrna1
Chr2	gffcl	locus	69167110	69167796	.	+	.	ID=RLOC_00018273;geneIDs=comp91862_c0_seq1.path1;transcripts=comp91862_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69167110	69167796	.	+	.	ID=comp91862_c0_seq1.mrna1;geneID=comp91862_c0_seq1.path1;Name=comp91862_c0_seq1;Dir=indeterminatecoverage=96.5;identity=99.9;matches=687;mismatches=0;indels=1;unknowns=0;Target=comp91862_c0_seq1 713 26 .;CDS_Target=comp91862_c0_seq1 85 26 .;locus=RLOC_00018273
Chr2	stalkie_big_nohaplotig	exon	69167110	69167796	99	+	.	Parent=comp91862_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69167110	69167168	.	+	0	Parent=comp91862_c0_seq1.mrna1
Chr2	gffcl	locus	69168024	69196728	.	+	.	ID=RLOC_00018274;geneIDs=FBgn0023213.1.path1;transcripts=FBgn0023213.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69168024	69196728	.	+	.	ID=FBgn0023213.1.mrna1;geneID=FBgn0023213.1.path1;Name=FBgn0023213.1;Dir=sensecoverage=97.6;identity=99.6;matches=5076;mismatches=9;indels=9;unknowns=0;locus=RLOC_00018274
Chr2	stalkie_big_nohaplotig	exon	69168024	69168629	100	+	.	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 127 732 +
Chr2	stalkie_big_nohaplotig	exon	69168685	69168862	100	+	.	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 733 910 +
Chr2	stalkie_big_nohaplotig	exon	69168917	69169034	100	+	.	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 911 1028 +
Chr2	stalkie_big_nohaplotig	exon	69177697	69177740	100	+	.	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 1029 1072 +
Chr2	stalkie_big_nohaplotig	exon	69191681	69194151	99	+	.	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 1073 3552 +
Chr2	stalkie_big_nohaplotig	exon	69194412	69194664	100	+	.	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 3553 3805 +
Chr2	stalkie_big_nohaplotig	exon	69194716	69194876	100	+	.	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 3806 3966 +
Chr2	stalkie_big_nohaplotig	exon	69194955	69195435	100	+	.	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 3967 4447 +
Chr2	stalkie_big_nohaplotig	exon	69195501	69195724	99	+	.	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 4448 4671 +
Chr2	stalkie_big_nohaplotig	exon	69195828	69195974	100	+	.	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 4672 4818 +
Chr2	stalkie_big_nohaplotig	exon	69196037	69196259	100	+	.	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 4819 5041 +
Chr2	stalkie_big_nohaplotig	exon	69196396	69196497	100	+	.	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 5042 5143 +
Chr2	stalkie_big_nohaplotig	exon	69196652	69196728	100	+	.	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 5144 5220 +
Chr2	stalkie_big_nohaplotig	CDS	69168024	69168629	.	+	0	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 127 732 +
Chr2	stalkie_big_nohaplotig	CDS	69168685	69168862	.	+	0	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 733 910 +
Chr2	stalkie_big_nohaplotig	CDS	69168917	69169034	.	+	2	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 911 1028 +
Chr2	stalkie_big_nohaplotig	CDS	69177697	69177740	.	+	1	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 1029 1072 +
Chr2	stalkie_big_nohaplotig	CDS	69191681	69194151	.	+	2	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 1073 3552 +
Chr2	stalkie_big_nohaplotig	CDS	69194412	69194664	.	+	0	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 3553 3805 +
Chr2	stalkie_big_nohaplotig	CDS	69194716	69194876	.	+	2	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 3806 3966 +
Chr2	stalkie_big_nohaplotig	CDS	69194955	69195435	.	+	0	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 3967 4447 +
Chr2	stalkie_big_nohaplotig	CDS	69195501	69195724	.	+	2	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 4448 4671 +
Chr2	stalkie_big_nohaplotig	CDS	69195828	69195974	.	+	0	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 4672 4818 +
Chr2	stalkie_big_nohaplotig	CDS	69196037	69196259	.	+	0	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 4819 5041 +
Chr2	stalkie_big_nohaplotig	CDS	69196396	69196497	.	+	2	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 5042 5143 +
Chr2	stalkie_big_nohaplotig	CDS	69196652	69196728	.	+	2	Parent=FBgn0023213.1.mrna1;Target=FBgn0023213.1 5144 5220 +
Chr2	gffcl	locus	69172623	69173968	.	-	.	ID=RLOC_00018275;geneIDs=comp145299_c0_seq1.path1;transcripts=comp145299_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69172623	69173968	.	-	.	ID=comp145299_c0_seq1.mrna1;geneID=comp145299_c0_seq1.path1;Name=comp145299_c0_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=1346;mismatches=0;indels=0;unknowns=0;Target=comp145299_c0_seq1 1346 1 .;CDS_Target=comp145299_c0_seq1 465 346 .;locus=RLOC_00018275
Chr2	stalkie_big_nohaplotig	exon	69172623	69173968	100	-	.	Parent=comp145299_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69173504	69173623	.	-	0	Parent=comp145299_c0_seq1.mrna1
Chr2	gffcl	locus	69178985	69179720	.	+	.	ID=RLOC_00018276;geneIDs=comp118590_c0_seq1.path1;transcripts=comp118590_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69178985	69179720	.	+	.	ID=comp118590_c0_seq1.mrna1;geneID=comp118590_c0_seq1.path1;Name=comp118590_c0_seq1;Dir=sensecoverage=90.3;identity=91.7;matches=444;mismatches=39;indels=1;unknowns=0;locus=RLOC_00018276
Chr2	stalkie_big_nohaplotig	exon	69178985	69179037	86	+	.	Parent=comp118590_c0_seq1.mrna1;Target=comp118590_c0_seq1 53 105 +
Chr2	stalkie_big_nohaplotig	exon	69179291	69179720	92	+	.	Parent=comp118590_c0_seq1.mrna1;Target=comp118590_c0_seq1 106 536 +
Chr2	stalkie_big_nohaplotig	CDS	69178985	69179037	.	+	0	Parent=comp118590_c0_seq1.mrna1;Target=comp118590_c0_seq1 53 105 +
Chr2	stalkie_big_nohaplotig	CDS	69179291	69179294	.	+	1	Parent=comp118590_c0_seq1.mrna1;Target=comp118590_c0_seq1 106 109 +
Chr2	gffcl	locus	69188269	69188870	.	-	.	ID=RLOC_00018277;geneIDs=comp140562_c2_seq1.path1;transcripts=comp140562_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69188269	69188870	.	-	.	ID=comp140562_c2_seq1.mrna1;geneID=comp140562_c2_seq1.path1;Name=comp140562_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=601;mismatches=1;indels=0;unknowns=0;Target=comp140562_c2_seq1 602 1 .;CDS_Target=comp140562_c2_seq1 191 132 .;locus=RLOC_00018277
Chr2	stalkie_big_nohaplotig	exon	69188269	69188870	99	-	.	Parent=comp140562_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69188680	69188739	.	-	0	Parent=comp140562_c2_seq1.mrna1
Chr2	gffcl	locus	69246055	69247128	.	+	.	ID=RLOC_00018278;geneIDs=comp149285_c0_seq1.path1;transcripts=comp149285_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69246055	69247128	.	+	.	ID=comp149285_c0_seq1.mrna1;geneID=comp149285_c0_seq1.path1;Name=comp149285_c0_seq1;Dir=indeterminatecoverage=92.2;identity=98.9;matches=1063;mismatches=5;indels=7;unknowns=0;Target=comp149285_c0_seq1 1069 1 .;CDS_Target=comp149285_c0_seq1 359 288 .;locus=RLOC_00018278
Chr2	stalkie_big_nohaplotig	exon	69246055	69247128	98	+	.	Parent=comp149285_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69246342	69246412	.	+	0	Parent=comp149285_c0_seq1.mrna1
Chr2	gffcl	locus	69355169	69357302	.	.	.	ID=RLOC_00018279;geneIDs=Dp_FBgn0249247.9.path3,comp162761_c1_seq1.path3;transcripts=comp162761_c1_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	69355169	69357302	.	+	.	ID=comp162761_c1_seq1.mrna3;geneID=comp162761_c1_seq1.path3;Name=comp162761_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=2129;mismatches=5;indels=0;unknowns=0;Target=comp162761_c1_seq1 2134 1 .;CDS_Target=comp162761_c1_seq1 1327 1136 .;locus=RLOC_00018279
Chr2	stalkie_big_nohaplotig	exon	69355169	69357302	99	+	.	Parent=comp162761_c1_seq1.mrna3
Chr2	stalkie_big_nohaplotig	CDS	69356304	69356495	.	+	0	Parent=comp162761_c1_seq1.mrna3
Chr2	gffcl	locus	69395226	69395527	.	+	.	ID=RLOC_00018280;geneIDs=comp135107_c0_seq1.path2;transcripts=comp135107_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	69395226	69395527	.	+	.	ID=comp135107_c0_seq1.mrna2;geneID=comp135107_c0_seq1.path2;Name=comp135107_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=300;mismatches=2;indels=0;unknowns=0;Target=comp135107_c0_seq1 302 1 .;CDS_Target=comp135107_c0_seq1 119 3 .;locus=RLOC_00018280
Chr2	stalkie_big_nohaplotig	exon	69395226	69395527	99	+	.	Parent=comp135107_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	69395228	69395344	.	+	0	Parent=comp135107_c0_seq1.mrna2
Chr2	gffcl	locus	69461493	69463643	.	+	.	ID=RLOC_00018284;geneIDs=comp162131_c0_seq1.path1;transcripts=comp162131_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69461493	69463643	.	+	.	ID=comp162131_c0_seq1.mrna1;geneID=comp162131_c0_seq1.path1;Name=comp162131_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.8;matches=2078;mismatches=73;indels=41;unknowns=0;Target=comp162131_c0_seq1 2192 1 .;CDS_Target=comp162131_c0_seq1 2192 222 .;locus=RLOC_00018284
Chr2	stalkie_big_nohaplotig	exon	69461493	69463643	94	+	.	Parent=comp162131_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69461714	69463643	.	+	0	Parent=comp162131_c0_seq1.mrna1
Chr2	gffcl	locus	69474933	69475499	.	-	.	ID=RLOC_00018285;geneIDs=comp148249_c0_seq1.path1;transcripts=comp148249_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69474933	69475499	.	-	.	ID=comp148249_c0_seq1.mrna1;geneID=comp148249_c0_seq1.path1;Name=comp148249_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=567;mismatches=0;indels=5;unknowns=0;Target=comp148249_c0_seq1 572 1 .;CDS_Target=comp148249_c0_seq1 452 405 .;locus=RLOC_00018285
Chr2	stalkie_big_nohaplotig	exon	69474933	69475499	99	-	.	Parent=comp148249_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69475052	69475099	.	-	0	Parent=comp148249_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69475528	69513253	.	-	.	ID=comp157908_c0_seq1.mrna1;geneID=comp157908_c0_seq1.path1;Name=comp157908_c0_seq1;Dir=indeterminatecoverage=48.5;identity=94.2;matches=2506;mismatches=77;indels=77;unknowns=0;Target=comp157908_c0_seq1 3676 3512 .;locus=RLOC_00018286
Chr2	stalkie_big_nohaplotig	exon	69475528	69477796	99	-	.	Parent=comp157908_c0_seq1.mrna1;Target=comp157908_c0_seq1 5107 2839 .
Chr2	stalkie_big_nohaplotig	exon	69479133	69479139	100	-	.	Parent=comp157908_c0_seq1.mrna1;Target=comp157908_c0_seq1 2838 2832 .
Chr2	stalkie_big_nohaplotig	exon	69479448	69479488	50	-	.	Parent=comp157908_c0_seq1.mrna1;Target=comp157908_c0_seq1 2831 2772 .
Chr2	stalkie_big_nohaplotig	exon	69483443	69483475	52	-	.	Parent=comp157908_c0_seq1.mrna1;Target=comp157908_c0_seq1 2771 2741 .
Chr2	stalkie_big_nohaplotig	exon	69487157	69487164	100	-	.	Parent=comp157908_c0_seq1.mrna1;Target=comp157908_c0_seq1 2726 2719 .
Chr2	stalkie_big_nohaplotig	exon	69487173	69487180	100	-	.	Parent=comp157908_c0_seq1.mrna1;Target=comp157908_c0_seq1 2681 2674 .
Chr2	stalkie_big_nohaplotig	exon	69493553	69493560	100	-	.	Parent=comp157908_c0_seq1.mrna1;Target=comp157908_c0_seq1 2610 2603 .
Chr2	stalkie_big_nohaplotig	exon	69493809	69493822	85	-	.	Parent=comp157908_c0_seq1.mrna1;Target=comp157908_c0_seq1 2602 2589 .
Chr2	stalkie_big_nohaplotig	exon	69495200	69495221	52	-	.	Parent=comp157908_c0_seq1.mrna1;Target=comp157908_c0_seq1 2588 2569 .
Chr2	stalkie_big_nohaplotig	exon	69498134	69498143	90	-	.	Parent=comp157908_c0_seq1.mrna1;Target=comp157908_c0_seq1 2564 2555 .
Chr2	stalkie_big_nohaplotig	exon	69500121	69500188	50	-	.	Parent=comp157908_c0_seq1.mrna1;Target=comp157908_c0_seq1 2554 2478 .
Chr2	stalkie_big_nohaplotig	exon	69500305	69500355	53	-	.	Parent=comp157908_c0_seq1.mrna1;Target=comp157908_c0_seq1 2477 2411 .
Chr2	stalkie_big_nohaplotig	exon	69501078	69501089	37	-	.	Parent=comp157908_c0_seq1.mrna1;Target=comp157908_c0_seq1 2410 2379 .
Chr2	stalkie_big_nohaplotig	exon	69503399	69503404	100	-	.	Parent=comp157908_c0_seq1.mrna1;Target=comp157908_c0_seq1 2378 2373 .
Chr2	stalkie_big_nohaplotig	exon	69505360	69505367	100	-	.	Parent=comp157908_c0_seq1.mrna1;Target=comp157908_c0_seq1 2372 2365 .
Chr2	stalkie_big_nohaplotig	exon	69505398	69505408	81	-	.	Parent=comp157908_c0_seq1.mrna1;Target=comp157908_c0_seq1 2279 2269 .
Chr2	stalkie_big_nohaplotig	exon	69513240	69513253	92	-	.	Parent=comp157908_c0_seq1.mrna1;Target=comp157908_c0_seq1 2268 2256 .
Chr2	stalkie_big_nohaplotig	CDS	69476959	69477123	.	-	0	Parent=comp157908_c0_seq1.mrna1
Chr2	gffcl	locus	69537987	69540737	.	.	.	ID=RLOC_00018288;geneIDs=FBgn0022361.1.path1,comp147873_c0_seq1.path1;transcripts=FBgn0022361.1.mrna1,comp147873_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69537987	69540737	.	-	.	ID=FBgn0022361.1.mrna1;geneID=FBgn0022361.1.path1;Name=FBgn0022361.1;Dir=sensecoverage=100.0;identity=100.0;matches=852;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018288
Chr2	stalkie_big_nohaplotig	exon	69537987	69538145	100	-	.	Parent=FBgn0022361.1.mrna1;Target=FBgn0022361.1 694 852 +
Chr2	stalkie_big_nohaplotig	exon	69538198	69538303	100	-	.	Parent=FBgn0022361.1.mrna1;Target=FBgn0022361.1 588 693 +
Chr2	stalkie_big_nohaplotig	exon	69538358	69538479	100	-	.	Parent=FBgn0022361.1.mrna1;Target=FBgn0022361.1 466 587 +
Chr2	stalkie_big_nohaplotig	exon	69538532	69538650	100	-	.	Parent=FBgn0022361.1.mrna1;Target=FBgn0022361.1 347 465 +
Chr2	stalkie_big_nohaplotig	exon	69539994	69540096	100	-	.	Parent=FBgn0022361.1.mrna1;Target=FBgn0022361.1 244 346 +
Chr2	stalkie_big_nohaplotig	exon	69540146	69540258	100	-	.	Parent=FBgn0022361.1.mrna1;Target=FBgn0022361.1 131 243 +
Chr2	stalkie_big_nohaplotig	exon	69540309	69540368	100	-	.	Parent=FBgn0022361.1.mrna1;Target=FBgn0022361.1 71 130 +
Chr2	stalkie_big_nohaplotig	exon	69540611	69540655	100	-	.	Parent=FBgn0022361.1.mrna1;Target=FBgn0022361.1 26 70 +
Chr2	stalkie_big_nohaplotig	exon	69540713	69540737	100	-	.	Parent=FBgn0022361.1.mrna1;Target=FBgn0022361.1 1 25 +
Chr2	stalkie_big_nohaplotig	CDS	69537987	69538145	.	-	0	Parent=FBgn0022361.1.mrna1;Target=FBgn0022361.1 694 852 +
Chr2	stalkie_big_nohaplotig	CDS	69538198	69538303	.	-	1	Parent=FBgn0022361.1.mrna1;Target=FBgn0022361.1 588 693 +
Chr2	stalkie_big_nohaplotig	CDS	69538358	69538479	.	-	0	Parent=FBgn0022361.1.mrna1;Target=FBgn0022361.1 466 587 +
Chr2	stalkie_big_nohaplotig	CDS	69538532	69538650	.	-	2	Parent=FBgn0022361.1.mrna1;Target=FBgn0022361.1 347 465 +
Chr2	stalkie_big_nohaplotig	CDS	69539994	69540096	.	-	0	Parent=FBgn0022361.1.mrna1;Target=FBgn0022361.1 244 346 +
Chr2	stalkie_big_nohaplotig	CDS	69540146	69540258	.	-	2	Parent=FBgn0022361.1.mrna1;Target=FBgn0022361.1 131 243 +
Chr2	stalkie_big_nohaplotig	CDS	69540309	69540368	.	-	2	Parent=FBgn0022361.1.mrna1;Target=FBgn0022361.1 71 130 +
Chr2	stalkie_big_nohaplotig	CDS	69540611	69540655	.	-	2	Parent=FBgn0022361.1.mrna1;Target=FBgn0022361.1 26 70 +
Chr2	stalkie_big_nohaplotig	CDS	69540713	69540737	.	-	0	Parent=FBgn0022361.1.mrna1;Target=FBgn0022361.1 1 25 +
Chr2	stalkie_big_nohaplotig	mRNA	69538629	69539174	.	+	.	ID=comp147873_c0_seq1.mrna1;geneID=comp147873_c0_seq1.path1;Name=comp147873_c0_seq1;Dir=indeterminatecoverage=97.9;identity=99.6;matches=546;mismatches=0;indels=2;unknowns=0;Target=comp147873_c0_seq1 548 1 .;CDS_Target=comp147873_c0_seq1 400 302 .;locus=RLOC_00018288
Chr2	stalkie_big_nohaplotig	exon	69538629	69539174	99	+	.	Parent=comp147873_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69538929	69539026	.	+	0	Parent=comp147873_c0_seq1.mrna1
Chr2	gffcl	locus	69539371	69539748	.	+	.	ID=RLOC_00018289;geneIDs=comp565271_c0_seq1.path1;transcripts=comp565271_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69539371	69539748	.	+	.	ID=comp565271_c0_seq1.mrna1;geneID=comp565271_c0_seq1.path1;Name=comp565271_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=378;mismatches=0;indels=0;unknowns=0;Target=comp565271_c0_seq1 379 2 .;CDS_Target=comp565271_c0_seq1 261 187 .;locus=RLOC_00018289
Chr2	stalkie_big_nohaplotig	exon	69539371	69539748	100	+	.	Parent=comp565271_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69539556	69539630	.	+	0	Parent=comp565271_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69626881	71598161	.	-	.	ID=comp163333_c3_seq1.mrna1;geneID=comp163333_c3_seq1.path1;Name=comp163333_c3_seq1;Dir=indeterminatecoverage=96.0;identity=90.8;matches=2462;mismatches=104;indels=144;unknowns=0;locus=RLOC_00018290
Chr2	stalkie_big_nohaplotig	exon	69626881	69626886	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3572 3567 .
Chr2	stalkie_big_nohaplotig	exon	69631701	69631708	87	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3522 3515 .
Chr2	stalkie_big_nohaplotig	exon	69631765	69631772	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3514 3507 .
Chr2	stalkie_big_nohaplotig	exon	69643756	69643758	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3506 3504 .
Chr2	stalkie_big_nohaplotig	exon	69664930	69664938	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3458 3450 .
Chr2	stalkie_big_nohaplotig	exon	69665080	69665090	81	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3449 3439 .
Chr2	stalkie_big_nohaplotig	exon	69672106	69672117	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3406 3395 .
Chr2	stalkie_big_nohaplotig	exon	69680749	69680757	88	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3394 3387 .
Chr2	stalkie_big_nohaplotig	exon	69681123	69681139	25	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3386 3332 .
Chr2	stalkie_big_nohaplotig	exon	69685157	69685162	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3331 3326 .
Chr2	stalkie_big_nohaplotig	exon	69690172	69690190	45	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3325 3291 .
Chr2	stalkie_big_nohaplotig	exon	69690985	69691003	34	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3290 3253 .
Chr2	stalkie_big_nohaplotig	exon	69695677	69695686	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3235 3226 .
Chr2	stalkie_big_nohaplotig	exon	69700238	69700240	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3225 3223 .
Chr2	stalkie_big_nohaplotig	exon	69706649	69706654	62	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3222 3215 .
Chr2	stalkie_big_nohaplotig	exon	69724322	69724341	75	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3214 3197 .
Chr2	stalkie_big_nohaplotig	exon	69729637	69729646	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3196 3187 .
Chr2	stalkie_big_nohaplotig	exon	69734266	69734278	84	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3186 3174 .
Chr2	stalkie_big_nohaplotig	exon	69737364	69737376	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3173 3161 .
Chr2	stalkie_big_nohaplotig	exon	69741622	69741625	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3160 3157 .
Chr2	stalkie_big_nohaplotig	exon	69748022	69748034	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3104 3092 .
Chr2	stalkie_big_nohaplotig	exon	69751046	69751051	66	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3091 3086 .
Chr2	stalkie_big_nohaplotig	exon	69759999	69760008	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3060 3051 .
Chr2	stalkie_big_nohaplotig	exon	69779832	69779842	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 3046 3036 .
Chr2	stalkie_big_nohaplotig	exon	69834473	69834522	52	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2930 2862 .
Chr2	stalkie_big_nohaplotig	exon	69839222	69839229	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2861 2854 .
Chr2	stalkie_big_nohaplotig	exon	69842534	69842544	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2853 2843 .
Chr2	stalkie_big_nohaplotig	exon	69846497	69846565	47	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2842 2754 .
Chr2	stalkie_big_nohaplotig	exon	69847238	69847248	90	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2732 2722 .
Chr2	stalkie_big_nohaplotig	exon	69848507	69848508	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2721 2720 .
Chr2	stalkie_big_nohaplotig	exon	69863534	69863535	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2719 2718 .
Chr2	stalkie_big_nohaplotig	exon	69868746	69868753	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2717 2710 .
Chr2	stalkie_big_nohaplotig	exon	69876312	69876322	72	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2709 2699 .
Chr2	stalkie_big_nohaplotig	exon	69883993	69883998	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2698 2693 .
Chr2	stalkie_big_nohaplotig	exon	69886899	69886910	83	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2692 2681 .
Chr2	stalkie_big_nohaplotig	exon	69892605	69892644	45	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2680 2622 .
Chr2	stalkie_big_nohaplotig	exon	69897047	69897056	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2507 2498 .
Chr2	stalkie_big_nohaplotig	exon	69904461	69904469	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2497 2489 .
Chr2	stalkie_big_nohaplotig	exon	69919958	69919960	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2488 2486 .
Chr2	stalkie_big_nohaplotig	exon	70256454	70256465	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2271 2260 .
Chr2	stalkie_big_nohaplotig	exon	70260365	70260372	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2192 2185 .
Chr2	stalkie_big_nohaplotig	exon	70260449	70260455	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2153 2147 .
Chr2	stalkie_big_nohaplotig	exon	70305275	70305285	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2146 2136 .
Chr2	stalkie_big_nohaplotig	exon	70308234	70308242	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2135 2127 .
Chr2	stalkie_big_nohaplotig	exon	70312282	70312283	50	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2126 2125 .
Chr2	stalkie_big_nohaplotig	exon	71066459	71066469	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2109 2099 .
Chr2	stalkie_big_nohaplotig	exon	71210027	71210036	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2088 2079 .
Chr2	stalkie_big_nohaplotig	exon	71213999	71214008	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2060 2051 .
Chr2	stalkie_big_nohaplotig	exon	71361004	71361012	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2037 2029 .
Chr2	stalkie_big_nohaplotig	exon	71366265	71366269	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2028 2024 .
Chr2	stalkie_big_nohaplotig	exon	71369711	71369722	75	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2023 2012 .
Chr2	stalkie_big_nohaplotig	exon	71372737	71372743	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2011 2005 .
Chr2	stalkie_big_nohaplotig	exon	71373281	71373283	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2004 2002 .
Chr2	stalkie_big_nohaplotig	exon	71385148	71385152	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 2001 1997 .
Chr2	stalkie_big_nohaplotig	exon	71396865	71396870	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 1996 1991 .
Chr2	stalkie_big_nohaplotig	exon	71419280	71419289	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 1934 1925 .
Chr2	stalkie_big_nohaplotig	exon	71543499	71543504	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 1924 1919 .
Chr2	stalkie_big_nohaplotig	exon	71547973	71547977	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 1918 1914 .
Chr2	stalkie_big_nohaplotig	exon	71548060	71548063	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 1913 1910 .
Chr2	stalkie_big_nohaplotig	exon	71551731	71551734	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 1909 1906 .
Chr2	stalkie_big_nohaplotig	exon	71558563	71558574	83	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 1905 1894 .
Chr2	stalkie_big_nohaplotig	exon	71560542	71560591	58	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 1893 1844 .
Chr2	stalkie_big_nohaplotig	exon	71567471	71567477	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 1843 1837 .
Chr2	stalkie_big_nohaplotig	exon	71573871	71573872	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 1836 1835 .
Chr2	stalkie_big_nohaplotig	exon	71582301	71582304	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 1834 1831 .
Chr2	stalkie_big_nohaplotig	exon	71596154	71596398	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 1830 1586 .
Chr2	stalkie_big_nohaplotig	exon	71596522	71597993	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 1585 114 .
Chr2	stalkie_big_nohaplotig	exon	71598049	71598161	100	-	.	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 113 1 .
Chr2	stalkie_big_nohaplotig	CDS	71560588	71560591	.	-	1	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 1847 1844 .
Chr2	stalkie_big_nohaplotig	CDS	71567471	71567477	.	-	2	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 1843 1837 .
Chr2	stalkie_big_nohaplotig	CDS	71573871	71573872	.	-	1	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 1836 1835 .
Chr2	stalkie_big_nohaplotig	CDS	71582301	71582304	.	-	2	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 1834 1831 .
Chr2	stalkie_big_nohaplotig	CDS	71596154	71596398	.	-	1	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 1830 1586 .
Chr2	stalkie_big_nohaplotig	CDS	71596522	71597897	.	-	0	Parent=comp163333_c3_seq1.mrna1;Target=comp163333_c3_seq1 1585 210 .
Chr2	stalkie_big_nohaplotig	mRNA	69801665	69943557	.	-	.	ID=comp151724_c0_seq1.mrna1;geneID=comp151724_c0_seq1.path1;Name=comp151724_c0_seq1;Dir=antisensecoverage=95.3;identity=99.2;matches=3252;mismatches=14;indels=13;unknowns=0;locus=RLOC_00018290
Chr2	stalkie_big_nohaplotig	exon	69801665	69801675	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 181 191 -
Chr2	stalkie_big_nohaplotig	exon	69803089	69803095	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 192 198 -
Chr2	stalkie_big_nohaplotig	exon	69805854	69805861	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 199 206 -
Chr2	stalkie_big_nohaplotig	exon	69819920	69819927	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 207 214 -
Chr2	stalkie_big_nohaplotig	exon	69825273	69825280	87	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 215 222 -
Chr2	stalkie_big_nohaplotig	exon	69828386	69828391	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 223 228 -
Chr2	stalkie_big_nohaplotig	exon	69829222	69829223	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 229 230 -
Chr2	stalkie_big_nohaplotig	exon	69835528	69835531	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 231 234 -
Chr2	stalkie_big_nohaplotig	exon	69839191	69839198	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 235 242 -
Chr2	stalkie_big_nohaplotig	exon	69844727	69844737	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 243 253 -
Chr2	stalkie_big_nohaplotig	exon	69866965	69866967	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 254 256 -
Chr2	stalkie_big_nohaplotig	exon	69872319	69872320	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 257 258 -
Chr2	stalkie_big_nohaplotig	exon	69877802	69877806	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 259 263 -
Chr2	stalkie_big_nohaplotig	exon	69895728	69895736	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 264 272 -
Chr2	stalkie_big_nohaplotig	exon	69899229	69899236	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 273 280 -
Chr2	stalkie_big_nohaplotig	exon	69901647	69901654	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 295 302 -
Chr2	stalkie_big_nohaplotig	exon	69907283	69907286	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 303 306 -
Chr2	stalkie_big_nohaplotig	exon	69907911	69907921	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 307 317 -
Chr2	stalkie_big_nohaplotig	exon	69919679	69919680	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 632 633 -
Chr2	stalkie_big_nohaplotig	exon	69922623	69922634	83	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 634 645 -
Chr2	stalkie_big_nohaplotig	exon	69926597	69926626	53	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 709 751 -
Chr2	stalkie_big_nohaplotig	exon	69927069	69927595	99	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 768 1294 -
Chr2	stalkie_big_nohaplotig	exon	69927652	69927807	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 1295 1450 -
Chr2	stalkie_big_nohaplotig	exon	69928067	69929497	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 1451 2881 -
Chr2	stalkie_big_nohaplotig	exon	69931428	69931571	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 2882 3025 -
Chr2	stalkie_big_nohaplotig	exon	69942183	69942502	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 3026 3345 -
Chr2	stalkie_big_nohaplotig	exon	69943041	69943557	100	-	.	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 3346 3862 -
Chr2	stalkie_big_nohaplotig	CDS	69927512	69927595	.	-	0	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 1211 1294 .
Chr2	stalkie_big_nohaplotig	CDS	69927652	69927807	.	-	0	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 1295 1450 .
Chr2	stalkie_big_nohaplotig	CDS	69928067	69929497	.	-	0	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 1451 2881 .
Chr2	stalkie_big_nohaplotig	CDS	69931428	69931571	.	-	0	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 2882 3025 .
Chr2	stalkie_big_nohaplotig	CDS	69942183	69942497	.	-	0	Parent=comp151724_c0_seq1.mrna1;Target=comp151724_c0_seq1 3026 3340 .
Chr2	stalkie_big_nohaplotig	mRNA	69835235	69836038	.	+	.	ID=comp141387_c0_seq1.mrna1;geneID=comp141387_c0_seq1.path1;Name=comp141387_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=801;mismatches=3;indels=0;unknowns=0;Target=comp141387_c0_seq1 804 1 .;CDS_Target=comp141387_c0_seq1 692 567 .;locus=RLOC_00018290
Chr2	stalkie_big_nohaplotig	exon	69835235	69836038	99	+	.	Parent=comp141387_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69835801	69835926	.	+	0	Parent=comp141387_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69846458	69846848	.	-	.	ID=Dp_FBgn0245446.mrna2;geneID=Dp_FBgn0245446.path2;Name=Dp_FBgn0245446;Dir=indeterminatecoverage=100.0;identity=86.4;matches=338;mismatches=19;indels=34;unknowns=0;Target=Dp_FBgn0245446 357 1 .;locus=RLOC_00018290
Chr2	stalkie_big_nohaplotig	exon	69846458	69846848	86	-	.	Parent=Dp_FBgn0245446.mrna2
Chr2	stalkie_big_nohaplotig	CDS	69846458	69846848	.	-	0	Parent=Dp_FBgn0245446.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	69881444	69884350	.	-	.	ID=comp235381_c0_seq1.mrna1;geneID=comp235381_c0_seq1.path1;Name=comp235381_c0_seq1;Dir=antisensecoverage=99.8;identity=100.0;matches=423;mismatches=0;indels=0;unknowns=0;Target=comp235381_c0_seq1 232 321 .;locus=RLOC_00018290
Chr2	stalkie_big_nohaplotig	exon	69881444	69881844	100	-	.	Parent=comp235381_c0_seq1.mrna1;Target=comp235381_c0_seq1 2 402 -
Chr2	stalkie_big_nohaplotig	exon	69884329	69884350	100	-	.	Parent=comp235381_c0_seq1.mrna1;Target=comp235381_c0_seq1 403 424 -
Chr2	stalkie_big_nohaplotig	CDS	69881674	69881763	.	-	0	Parent=comp235381_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69884301	69897313	.	-	.	ID=FBgn0039904.1.mrna1;geneID=FBgn0039904.1.path1;Name=FBgn0039904.1;Dir=sensecoverage=100.0;identity=100.0;matches=3789;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018290
Chr2	stalkie_big_nohaplotig	exon	69884301	69884444	100	-	.	Parent=FBgn0039904.1.mrna1;Target=FBgn0039904.1 3646 3789 +
Chr2	stalkie_big_nohaplotig	exon	69884503	69886968	100	-	.	Parent=FBgn0039904.1.mrna1;Target=FBgn0039904.1 1180 3645 +
Chr2	stalkie_big_nohaplotig	exon	69890659	69890810	100	-	.	Parent=FBgn0039904.1.mrna1;Target=FBgn0039904.1 1028 1179 +
Chr2	stalkie_big_nohaplotig	exon	69890871	69891059	100	-	.	Parent=FBgn0039904.1.mrna1;Target=FBgn0039904.1 839 1027 +
Chr2	stalkie_big_nohaplotig	exon	69891107	69891315	100	-	.	Parent=FBgn0039904.1.mrna1;Target=FBgn0039904.1 630 838 +
Chr2	stalkie_big_nohaplotig	exon	69896571	69896880	100	-	.	Parent=FBgn0039904.1.mrna1;Target=FBgn0039904.1 320 629 +
Chr2	stalkie_big_nohaplotig	exon	69896937	69897116	100	-	.	Parent=FBgn0039904.1.mrna1;Target=FBgn0039904.1 140 319 +
Chr2	stalkie_big_nohaplotig	exon	69897175	69897313	100	-	.	Parent=FBgn0039904.1.mrna1;Target=FBgn0039904.1 1 139 +
Chr2	stalkie_big_nohaplotig	CDS	69884301	69884444	.	-	0	Parent=FBgn0039904.1.mrna1;Target=FBgn0039904.1 3646 3789 +
Chr2	stalkie_big_nohaplotig	CDS	69884503	69886968	.	-	0	Parent=FBgn0039904.1.mrna1;Target=FBgn0039904.1 1180 3645 +
Chr2	stalkie_big_nohaplotig	CDS	69890659	69890810	.	-	2	Parent=FBgn0039904.1.mrna1;Target=FBgn0039904.1 1028 1179 +
Chr2	stalkie_big_nohaplotig	CDS	69890871	69891059	.	-	2	Parent=FBgn0039904.1.mrna1;Target=FBgn0039904.1 839 1027 +
Chr2	stalkie_big_nohaplotig	CDS	69891107	69891315	.	-	1	Parent=FBgn0039904.1.mrna1;Target=FBgn0039904.1 630 838 +
Chr2	stalkie_big_nohaplotig	CDS	69896571	69896880	.	-	2	Parent=FBgn0039904.1.mrna1;Target=FBgn0039904.1 320 629 +
Chr2	stalkie_big_nohaplotig	CDS	69896937	69897116	.	-	2	Parent=FBgn0039904.1.mrna1;Target=FBgn0039904.1 140 319 +
Chr2	stalkie_big_nohaplotig	CDS	69897175	69897313	.	-	0	Parent=FBgn0039904.1.mrna1;Target=FBgn0039904.1 1 139 +
Chr2	stalkie_big_nohaplotig	mRNA	69926689	69927081	.	+	.	ID=comp119096_c0_seq1.mrna2;geneID=comp119096_c0_seq1.path2;Name=comp119096_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=391;mismatches=2;indels=7;unknowns=0;Target=comp119096_c0_seq1 400 1 .;CDS_Target=comp119096_c0_seq1 112 26 .;locus=RLOC_00018290
Chr2	stalkie_big_nohaplotig	exon	69926689	69927081	97	+	.	Parent=comp119096_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	69926714	69926800	.	+	0	Parent=comp119096_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	69927515	69942504	.	-	.	ID=FBgn0029095.1.mrna1;geneID=FBgn0029095.1.path1;Name=FBgn0029095.1;Dir=sensecoverage=99.9;identity=100.0;matches=2134;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018290
Chr2	stalkie_big_nohaplotig	exon	69927515	69927595	100	-	.	Parent=FBgn0029095.1.mrna1;Target=FBgn0029095.1 2056 2136 +
Chr2	stalkie_big_nohaplotig	exon	69927652	69927807	100	-	.	Parent=FBgn0029095.1.mrna1;Target=FBgn0029095.1 1900 2055 +
Chr2	stalkie_big_nohaplotig	exon	69928067	69929497	100	-	.	Parent=FBgn0029095.1.mrna1;Target=FBgn0029095.1 469 1899 +
Chr2	stalkie_big_nohaplotig	exon	69934308	69934451	100	-	.	Parent=FBgn0029095.1.mrna1;Target=FBgn0029095.1 325 468 +
Chr2	stalkie_big_nohaplotig	exon	69942183	69942504	100	-	.	Parent=FBgn0029095.1.mrna1;Target=FBgn0029095.1 3 324 +
Chr2	stalkie_big_nohaplotig	CDS	69927515	69927595	.	-	0	Parent=FBgn0029095.1.mrna1;Target=FBgn0029095.1 2056 2136 +
Chr2	stalkie_big_nohaplotig	CDS	69927652	69927807	.	-	0	Parent=FBgn0029095.1.mrna1;Target=FBgn0029095.1 1900 2055 +
Chr2	stalkie_big_nohaplotig	CDS	69928067	69929497	.	-	0	Parent=FBgn0029095.1.mrna1;Target=FBgn0029095.1 469 1899 +
Chr2	stalkie_big_nohaplotig	CDS	69934308	69934451	.	-	0	Parent=FBgn0029095.1.mrna1;Target=FBgn0029095.1 325 468 +
Chr2	stalkie_big_nohaplotig	CDS	69942183	69942503	.	-	0	Parent=FBgn0029095.1.mrna1;Target=FBgn0029095.1 4 324 +
Chr2	stalkie_big_nohaplotig	mRNA	70312270	70312716	.	+	.	ID=comp102648_c0_seq1.mrna1;geneID=comp102648_c0_seq1.path1;Name=comp102648_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=446;mismatches=1;indels=1;unknowns=0;Target=comp102648_c0_seq1 448 1 .;CDS_Target=comp102648_c0_seq1 176 3 .;locus=RLOC_00018290
Chr2	stalkie_big_nohaplotig	exon	70312270	70312716	99	+	.	Parent=comp102648_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	70312272	70312445	.	+	0	Parent=comp102648_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	71413227	71597909	.	-	.	ID=FBgn0019985.1.mrna1;geneID=FBgn0019985.1.path1;Name=FBgn0019985.1;Dir=sensecoverage=100.0;identity=98.3;matches=3072;mismatches=28;indels=26;unknowns=0;locus=RLOC_00018290
Chr2	stalkie_big_nohaplotig	exon	71413227	71413748	100	-	.	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 2689 3210 +
Chr2	stalkie_big_nohaplotig	exon	71444332	71444627	100	-	.	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 2393 2688 +
Chr2	stalkie_big_nohaplotig	exon	71522407	71522930	99	-	.	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 1869 2392 +
Chr2	stalkie_big_nohaplotig	exon	71530666	71530676	90	-	.	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 1858 1868 +
Chr2	stalkie_big_nohaplotig	exon	71533006	71533073	54	-	.	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 1787 1857 +
Chr2	stalkie_big_nohaplotig	exon	71543477	71543484	100	-	.	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 1779 1786 +
Chr2	stalkie_big_nohaplotig	exon	71567547	71567553	77	-	.	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 1770 1778 +
Chr2	stalkie_big_nohaplotig	exon	71578031	71578039	100	-	.	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 1761 1769 +
Chr2	stalkie_big_nohaplotig	exon	71592804	71592810	100	-	.	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 1754 1760 +
Chr2	stalkie_big_nohaplotig	exon	71593287	71593295	100	-	.	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 1658 1666 +
Chr2	stalkie_big_nohaplotig	exon	71596147	71596398	93	-	.	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 1389 1657 +
Chr2	stalkie_big_nohaplotig	exon	71596522	71597909	100	-	.	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 1 1388 +
Chr2	stalkie_big_nohaplotig	CDS	71413227	71413748	.	-	1	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 2689 3210 +
Chr2	stalkie_big_nohaplotig	CDS	71444332	71444627	.	-	0	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 2393 2688 +
Chr2	stalkie_big_nohaplotig	CDS	71522407	71522930	.	-	2	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 1869 2392 +
Chr2	stalkie_big_nohaplotig	CDS	71530666	71530676	.	-	1	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 1858 1868 +
Chr2	stalkie_big_nohaplotig	CDS	71533006	71533073	.	-	0	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 1787 1857 +
Chr2	stalkie_big_nohaplotig	CDS	71543477	71543484	.	-	2	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 1779 1786 +
Chr2	stalkie_big_nohaplotig	CDS	71567547	71567553	.	-	0	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 1770 1778 +
Chr2	stalkie_big_nohaplotig	CDS	71578031	71578039	.	-	0	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 1761 1769 +
Chr2	stalkie_big_nohaplotig	CDS	71592804	71592810	.	-	1	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 1754 1760 +
Chr2	stalkie_big_nohaplotig	CDS	71593287	71593295	.	-	1	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 1658 1666 +
Chr2	stalkie_big_nohaplotig	CDS	71596147	71596398	.	-	1	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 1389 1657 +
Chr2	stalkie_big_nohaplotig	CDS	71596522	71597909	.	-	0	Parent=FBgn0019985.1.mrna1;Target=FBgn0019985.1 1 1388 +
Chr2	gffcl	locus	69717997	69719070	.	-	.	ID=RLOC_00018291;geneIDs=comp141425_c0_seq1.path1;transcripts=comp141425_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69717997	69719070	.	-	.	ID=comp141425_c0_seq1.mrna1;geneID=comp141425_c0_seq1.path1;Name=comp141425_c0_seq1;Dir=sensecoverage=99.9;identity=100.0;matches=996;mismatches=0;indels=0;unknowns=0;Target=comp141425_c0_seq1 606 743 +;locus=RLOC_00018291
Chr2	stalkie_big_nohaplotig	exon	69717997	69718539	100	-	.	Parent=comp141425_c0_seq1.mrna1;Target=comp141425_c0_seq1 455 997 +
Chr2	stalkie_big_nohaplotig	exon	69718618	69719070	100	-	.	Parent=comp141425_c0_seq1.mrna1;Target=comp141425_c0_seq1 2 454 +
Chr2	stalkie_big_nohaplotig	CDS	69718251	69718388	.	-	0	Parent=comp141425_c0_seq1.mrna1
Chr2	gffcl	locus	69791524	69792478	.	.	.	ID=RLOC_00018293;geneIDs=comp109079_c0_seq1.path1,comp135217_c0_seq1.path1;transcripts=comp135217_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69791814	69792478	.	-	.	ID=comp135217_c0_seq1.mrna1;geneID=comp135217_c0_seq1.path1;Name=comp135217_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=664;mismatches=1;indels=0;unknowns=0;Target=comp135217_c0_seq1 665 1 .;CDS_Target=comp135217_c0_seq1 550 464 .;locus=RLOC_00018293
Chr2	stalkie_big_nohaplotig	exon	69791814	69792478	99	-	.	Parent=comp135217_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69791929	69792015	.	-	0	Parent=comp135217_c0_seq1.mrna1
Chr2	gffcl	locus	69792819	69793733	.	.	.	ID=RLOC_00018294;geneIDs=comp115176_c0_seq1.path1,comp548963_c0_seq1.path1;transcripts=comp115176_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69793058	69793733	.	-	.	ID=comp115176_c0_seq1.mrna1;geneID=comp115176_c0_seq1.path1;Name=comp115176_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=676;mismatches=0;indels=0;unknowns=0;Target=comp115176_c0_seq1 676 1 .;CDS_Target=comp115176_c0_seq1 527 402 .;locus=RLOC_00018294
Chr2	stalkie_big_nohaplotig	exon	69793058	69793733	100	-	.	Parent=comp115176_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69793207	69793332	.	-	0	Parent=comp115176_c0_seq1.mrna1
Chr2	gffcl	locus	69830514	69862918	.	-	.	ID=RLOC_00018295;geneIDs=comp153937_c0_seq1.path1;transcripts=comp153937_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69830514	69862918	.	-	.	ID=comp153937_c0_seq1.mrna1;geneID=comp153937_c0_seq1.path1;Name=comp153937_c0_seq1;Dir=indeterminatecoverage=64.5;identity=87.6;matches=674;mismatches=42;indels=53;unknowns=0;Target=comp153937_c0_seq1 965 825 .;locus=RLOC_00018295
Chr2	stalkie_big_nohaplotig	exon	69830514	69831111	97	-	.	Parent=comp153937_c0_seq1.mrna1;Target=comp153937_c0_seq1 1206 609 .
Chr2	stalkie_big_nohaplotig	exon	69843557	69843583	39	-	.	Parent=comp153937_c0_seq1.mrna1;Target=comp153937_c0_seq1 608 553 .
Chr2	stalkie_big_nohaplotig	exon	69849681	69849683	100	-	.	Parent=comp153937_c0_seq1.mrna1;Target=comp153937_c0_seq1 552 550 .
Chr2	stalkie_big_nohaplotig	exon	69851112	69851166	55	-	.	Parent=comp153937_c0_seq1.mrna1;Target=comp153937_c0_seq1 549 503 .
Chr2	stalkie_big_nohaplotig	exon	69854813	69854844	55	-	.	Parent=comp153937_c0_seq1.mrna1;Target=comp153937_c0_seq1 498 455 .
Chr2	stalkie_big_nohaplotig	exon	69862908	69862918	100	-	.	Parent=comp153937_c0_seq1.mrna1;Target=comp153937_c0_seq1 439 429 .
Chr2	stalkie_big_nohaplotig	CDS	69830755	69830895	.	-	0	Parent=comp153937_c0_seq1.mrna1
Chr2	gffcl	locus	69845390	69846368	.	-	.	ID=RLOC_00018296;geneIDs=comp161217_c0_seq1.path2;transcripts=comp161217_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	69845390	69846368	.	-	.	ID=comp161217_c0_seq1.mrna2;geneID=comp161217_c0_seq1.path2;Name=comp161217_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.4;matches=774;mismatches=63;indels=1;unknowns=0;Target=comp161217_c0_seq1 365 183 .;locus=RLOC_00018296
Chr2	stalkie_big_nohaplotig	exon	69845390	69845704	92	-	.	Parent=comp161217_c0_seq1.mrna2;Target=comp161217_c0_seq1 850 536 .
Chr2	stalkie_big_nohaplotig	exon	69845731	69846205	92	-	.	Parent=comp161217_c0_seq1.mrna2;Target=comp161217_c0_seq1 522 49 .
Chr2	stalkie_big_nohaplotig	exon	69846321	69846368	97	-	.	Parent=comp161217_c0_seq1.mrna2;Target=comp161217_c0_seq1 48 1 .
Chr2	stalkie_big_nohaplotig	CDS	69845889	69846071	.	-	0	Parent=comp161217_c0_seq1.mrna2
Chr2	gffcl	locus	69879385	69917282	.	-	.	ID=RLOC_00018297;geneIDs=Dv_FBgn0204253.1.path3,comp145813_c2_seq1.path1;transcripts=Dv_FBgn0204253.1.mrna3,comp145813_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69879385	69917282	.	-	.	ID=Dv_FBgn0204253.1.mrna3;geneID=Dv_FBgn0204253.1.path3;Name=Dv_FBgn0204253.1;Dir=indeterminatecoverage=99.6;identity=90.3;matches=410;mismatches=17;indels=27;unknowns=0;locus=RLOC_00018297
Chr2	stalkie_big_nohaplotig	exon	69879385	69879438	94	-	.	Parent=Dv_FBgn0204253.1.mrna3;Target=Dv_FBgn0204253.1 454 401 .
Chr2	stalkie_big_nohaplotig	exon	69889084	69889087	100	-	.	Parent=Dv_FBgn0204253.1.mrna3;Target=Dv_FBgn0204253.1 400 397 .
Chr2	stalkie_big_nohaplotig	exon	69899616	69899619	75	-	.	Parent=Dv_FBgn0204253.1.mrna3;Target=Dv_FBgn0204253.1 396 393 .
Chr2	stalkie_big_nohaplotig	exon	69909854	69909866	84	-	.	Parent=Dv_FBgn0204253.1.mrna3;Target=Dv_FBgn0204253.1 392 380 .
Chr2	stalkie_big_nohaplotig	exon	69916931	69917282	89	-	.	Parent=Dv_FBgn0204253.1.mrna3;Target=Dv_FBgn0204253.1 379 1 .
Chr2	stalkie_big_nohaplotig	CDS	69879386	69879438	.	-	2	Parent=Dv_FBgn0204253.1.mrna3;Target=Dv_FBgn0204253.1 453 401 .
Chr2	stalkie_big_nohaplotig	CDS	69889084	69889087	.	-	0	Parent=Dv_FBgn0204253.1.mrna3;Target=Dv_FBgn0204253.1 400 397 .
Chr2	stalkie_big_nohaplotig	CDS	69899616	69899619	.	-	1	Parent=Dv_FBgn0204253.1.mrna3;Target=Dv_FBgn0204253.1 396 393 .
Chr2	stalkie_big_nohaplotig	CDS	69909854	69909866	.	-	2	Parent=Dv_FBgn0204253.1.mrna3;Target=Dv_FBgn0204253.1 392 380 .
Chr2	stalkie_big_nohaplotig	CDS	69916931	69917282	.	-	0	Parent=Dv_FBgn0204253.1.mrna3;Target=Dv_FBgn0204253.1 379 1 .
Chr2	stalkie_big_nohaplotig	mRNA	69888853	69890490	.	-	.	ID=comp145813_c2_seq1.mrna1;geneID=comp145813_c2_seq1.path1;Name=comp145813_c2_seq1;Dir=indeterminatecoverage=77.9;identity=99.9;matches=1636;mismatches=2;indels=0;unknowns=0;Target=comp145813_c2_seq1 2103 466 .;CDS_Target=comp145813_c2_seq1 1382 1281 .;locus=RLOC_00018297
Chr2	stalkie_big_nohaplotig	exon	69888853	69890490	99	-	.	Parent=comp145813_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	69889574	69889675	.	-	0	Parent=comp145813_c2_seq1.mrna1
Chr2	gffcl	locus	69945899	69946808	.	-	.	ID=RLOC_00018298;geneIDs=FBgn0262534.1.path3;transcripts=FBgn0262534.1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	69945899	69946808	.	-	.	ID=FBgn0262534.1.mrna3;geneID=FBgn0262534.1.path3;Name=FBgn0262534.1;Dir=sensecoverage=98.8;identity=98.8;matches=790;mismatches=10;indels=0;unknowns=0;locus=RLOC_00018298
Chr2	stalkie_big_nohaplotig	exon	69945899	69946073	98	-	.	Parent=FBgn0262534.1.mrna3;Target=FBgn0262534.1 626 800 +
Chr2	stalkie_big_nohaplotig	exon	69946127	69946342	99	-	.	Parent=FBgn0262534.1.mrna3;Target=FBgn0262534.1 410 625 +
Chr2	stalkie_big_nohaplotig	exon	69946400	69946808	98	-	.	Parent=FBgn0262534.1.mrna3;Target=FBgn0262534.1 1 409 +
Chr2	stalkie_big_nohaplotig	CDS	69945945	69946073	.	-	0	Parent=FBgn0262534.1.mrna3;Target=FBgn0262534.1 626 754 +
Chr2	stalkie_big_nohaplotig	CDS	69946127	69946237	.	-	0	Parent=FBgn0262534.1.mrna3;Target=FBgn0262534.1 515 625 +
Chr2	gffcl	locus	69980271	69982022	.	-	.	ID=RLOC_00018299;geneIDs=Dp_FBgn0249247.9.path5;transcripts=Dp_FBgn0249247.9.mrna5
Chr2	stalkie_big_nohaplotig	mRNA	69980271	69982022	.	-	.	ID=Dp_FBgn0249247.9.mrna5;geneID=Dp_FBgn0249247.9.path5;Name=Dp_FBgn0249247.9;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1748;mismatches=4;indels=0;unknowns=0;Target=Dp_FBgn0249247.9 1752 1 .;locus=RLOC_00018299
Chr2	stalkie_big_nohaplotig	exon	69980271	69982022	99	-	.	Parent=Dp_FBgn0249247.9.mrna5
Chr2	stalkie_big_nohaplotig	CDS	69980271	69982022	.	-	0	Parent=Dp_FBgn0249247.9.mrna5
Chr2	gffcl	locus	69994955	70702070	.	-	.	ID=RLOC_00018300;geneIDs=AGAP003812.1.path1;transcripts=AGAP003812.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	69994955	70702070	.	-	.	ID=AGAP003812.1.mrna1;geneID=AGAP003812.1.path1;Name=AGAP003812.1;Dir=indeterminatecoverage=75.0;identity=95.9;matches=726;mismatches=26;indels=5;unknowns=0;Target=AGAP003812.1 565 374 .;locus=RLOC_00018300
Chr2	stalkie_big_nohaplotig	exon	69994955	69995523	97	-	.	Parent=AGAP003812.1.mrna1;Target=AGAP003812.1 790 223 .
Chr2	stalkie_big_nohaplotig	exon	70668338	70668350	100	-	.	Parent=AGAP003812.1.mrna1;Target=AGAP003812.1 183 171 .
Chr2	stalkie_big_nohaplotig	exon	70670264	70670274	72	-	.	Parent=AGAP003812.1.mrna1;Target=AGAP003812.1 170 160 .
Chr2	stalkie_big_nohaplotig	exon	70676682	70676692	100	-	.	Parent=AGAP003812.1.mrna1;Target=AGAP003812.1 159 149 .
Chr2	stalkie_big_nohaplotig	exon	70678951	70678983	72	-	.	Parent=AGAP003812.1.mrna1;Target=AGAP003812.1 148 120 .
Chr2	stalkie_big_nohaplotig	exon	70701952	70702070	98	-	.	Parent=AGAP003812.1.mrna1;Target=AGAP003812.1 119 1 .
Chr2	stalkie_big_nohaplotig	CDS	69995180	69995372	.	-	0	Parent=AGAP003812.1.mrna1
Chr2	gffcl	locus	70021441	70021864	.	+	.	ID=RLOC_00018302;geneIDs=comp150930_c0_seq1.path2;transcripts=comp150930_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	70021441	70021864	.	+	.	ID=comp150930_c0_seq1.mrna2;geneID=comp150930_c0_seq1.path2;Name=comp150930_c0_seq1;Dir=sensecoverage=23.3;identity=99.7;matches=353;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018302
Chr2	stalkie_big_nohaplotig	exon	70021441	70021618	99	+	.	Parent=comp150930_c0_seq1.mrna2;Target=comp150930_c0_seq1 681 858 +
Chr2	stalkie_big_nohaplotig	exon	70021689	70021864	100	+	.	Parent=comp150930_c0_seq1.mrna2;Target=comp150930_c0_seq1 859 1034 +
Chr2	stalkie_big_nohaplotig	CDS	70021441	70021618	.	+	2	Parent=comp150930_c0_seq1.mrna2;Target=comp150930_c0_seq1 681 858 +
Chr2	stalkie_big_nohaplotig	CDS	70021689	70021862	.	+	1	Parent=comp150930_c0_seq1.mrna2;Target=comp150930_c0_seq1 859 1032 +
Chr2	gffcl	locus	70079646	70402787	.	-	.	ID=RLOC_00018303;geneIDs=comp163964_c0_seq1.path1;transcripts=comp163964_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70079646	70402787	.	-	.	ID=comp163964_c0_seq1.mrna1;geneID=comp163964_c0_seq1.path1;Name=comp163964_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.6;matches=2708;mismatches=134;indels=146;unknowns=0;Target=comp163964_c0_seq1 1438 1250 .;locus=RLOC_00018303
Chr2	stalkie_big_nohaplotig	exon	70079646	70079752	90	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2980 2877 .
Chr2	stalkie_big_nohaplotig	exon	70080110	70080117	87	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2876 2869 .
Chr2	stalkie_big_nohaplotig	exon	70083484	70083491	100	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2868 2861 .
Chr2	stalkie_big_nohaplotig	exon	70091048	70091063	81	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2860 2846 .
Chr2	stalkie_big_nohaplotig	exon	70097376	70097393	80	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2845 2826 .
Chr2	stalkie_big_nohaplotig	exon	70098783	70098795	84	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2825 2813 .
Chr2	stalkie_big_nohaplotig	exon	70102378	70102407	47	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2812 2765 .
Chr2	stalkie_big_nohaplotig	exon	70105307	70105360	46	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2764 2695 .
Chr2	stalkie_big_nohaplotig	exon	70113159	70113168	90	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2694 2685 .
Chr2	stalkie_big_nohaplotig	exon	70135973	70135975	33	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2684 2682 .
Chr2	stalkie_big_nohaplotig	exon	70142362	70142369	87	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2681 2674 .
Chr2	stalkie_big_nohaplotig	exon	70152000	70152012	100	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2673 2661 .
Chr2	stalkie_big_nohaplotig	exon	70154434	70154437	100	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2660 2657 .
Chr2	stalkie_big_nohaplotig	exon	70159322	70159327	100	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2656 2651 .
Chr2	stalkie_big_nohaplotig	exon	70164574	70164578	100	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2650 2646 .
Chr2	stalkie_big_nohaplotig	exon	70164586	70164594	100	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2633 2625 .
Chr2	stalkie_big_nohaplotig	exon	70176321	70176325	100	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2624 2620 .
Chr2	stalkie_big_nohaplotig	exon	70193382	70193384	100	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2619 2617 .
Chr2	stalkie_big_nohaplotig	exon	70200512	70200566	41	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2616 2529 .
Chr2	stalkie_big_nohaplotig	exon	70208002	70208008	100	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2528 2522 .
Chr2	stalkie_big_nohaplotig	exon	70215666	70215669	75	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2521 2518 .
Chr2	stalkie_big_nohaplotig	exon	70222368	70222374	71	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2517 2511 .
Chr2	stalkie_big_nohaplotig	exon	70224309	70224315	100	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2510 2504 .
Chr2	stalkie_big_nohaplotig	exon	70232117	70232124	100	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2503 2496 .
Chr2	stalkie_big_nohaplotig	exon	70238254	70238287	45	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2495 2446 .
Chr2	stalkie_big_nohaplotig	exon	70251191	70251200	80	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2445 2436 .
Chr2	stalkie_big_nohaplotig	exon	70267888	70267894	100	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2435 2429 .
Chr2	stalkie_big_nohaplotig	exon	70288563	70288579	58	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2428 2405 .
Chr2	stalkie_big_nohaplotig	exon	70294526	70294575	58	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2404 2356 .
Chr2	stalkie_big_nohaplotig	exon	70295274	70295281	100	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2355 2348 .
Chr2	stalkie_big_nohaplotig	exon	70295691	70295693	100	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2347 2345 .
Chr2	stalkie_big_nohaplotig	exon	70295936	70295939	100	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2344 2341 .
Chr2	stalkie_big_nohaplotig	exon	70299847	70299850	100	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2340 2337 .
Chr2	stalkie_big_nohaplotig	exon	70300387	70300388	100	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2336 2335 .
Chr2	stalkie_big_nohaplotig	exon	70303628	70303632	100	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2334 2330 .
Chr2	stalkie_big_nohaplotig	exon	70309106	70309109	100	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2329 2326 .
Chr2	stalkie_big_nohaplotig	exon	70395490	70396721	96	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 2325 1088 .
Chr2	stalkie_big_nohaplotig	exon	70401713	70402787	96	-	.	Parent=comp163964_c0_seq1.mrna1;Target=comp163964_c0_seq1 1086 1 .
Chr2	stalkie_big_nohaplotig	CDS	70396371	70396559	.	-	0	Parent=comp163964_c0_seq1.mrna1
Chr2	gffcl	locus	70288859	70290543	.	+	.	ID=RLOC_00018306;geneIDs=comp132456_c0_seq1.path1,comp150930_c0_seq1.path1;transcripts=comp132456_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70288859	70289887	.	+	.	ID=comp132456_c0_seq1.mrna1;geneID=comp132456_c0_seq1.path1;Name=comp132456_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1029;mismatches=0;indels=1;unknowns=0;Target=comp132456_c0_seq1 1030 1 .;CDS_Target=comp132456_c0_seq1 928 641 .;locus=RLOC_00018306
Chr2	stalkie_big_nohaplotig	exon	70288859	70289887	99	+	.	Parent=comp132456_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	70289498	70289785	.	+	0	Parent=comp132456_c0_seq1.mrna1
Chr2	gffcl	locus	70290945	70291358	.	-	.	ID=RLOC_00018307;geneIDs=comp141076_c0_seq1.path1;transcripts=comp141076_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70290945	70291358	.	-	.	ID=comp141076_c0_seq1.mrna1;geneID=comp141076_c0_seq1.path1;Name=comp141076_c0_seq1;Dir=indeterminatecoverage=99.3;identity=100.0;matches=414;mismatches=0;indels=0;unknowns=0;Target=comp141076_c0_seq1 417 4 .;CDS_Target=comp141076_c0_seq1 303 214 .;locus=RLOC_00018307
Chr2	stalkie_big_nohaplotig	exon	70290945	70291358	100	-	.	Parent=comp141076_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	70291059	70291148	.	-	0	Parent=comp141076_c0_seq1.mrna1
Chr2	gffcl	locus	70465518	70535241	.	-	.	ID=RLOC_00018309;geneIDs=FBgn0259214.1.path1;transcripts=FBgn0259214.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70465518	70535241	.	-	.	ID=FBgn0259214.1.mrna1;geneID=FBgn0259214.1.path1;Name=FBgn0259214.1;Dir=sensecoverage=100.0;identity=100.0;matches=3602;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018309
Chr2	stalkie_big_nohaplotig	exon	70465518	70465736	100	-	.	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 3400 3618 +
Chr2	stalkie_big_nohaplotig	exon	70487329	70487397	100	-	.	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 3331 3399 +
Chr2	stalkie_big_nohaplotig	exon	70513384	70513518	100	-	.	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 3180 3314 +
Chr2	stalkie_big_nohaplotig	exon	70519091	70519242	100	-	.	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 3028 3179 +
Chr2	stalkie_big_nohaplotig	exon	70519298	70519509	100	-	.	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 2816 3027 +
Chr2	stalkie_big_nohaplotig	exon	70519647	70519845	100	-	.	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 2617 2815 +
Chr2	stalkie_big_nohaplotig	exon	70519906	70520219	100	-	.	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 2303 2616 +
Chr2	stalkie_big_nohaplotig	exon	70523418	70523505	100	-	.	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 2215 2302 +
Chr2	stalkie_big_nohaplotig	exon	70523570	70524014	100	-	.	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 1770 2214 +
Chr2	stalkie_big_nohaplotig	exon	70524158	70524399	100	-	.	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 1528 1769 +
Chr2	stalkie_big_nohaplotig	exon	70524456	70524698	100	-	.	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 1285 1527 +
Chr2	stalkie_big_nohaplotig	exon	70524758	70525152	100	-	.	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 890 1284 +
Chr2	stalkie_big_nohaplotig	exon	70525586	70525621	100	-	.	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 854 889 +
Chr2	stalkie_big_nohaplotig	exon	70525968	70526178	100	-	.	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 643 853 +
Chr2	stalkie_big_nohaplotig	exon	70526522	70526808	100	-	.	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 356 642 +
Chr2	stalkie_big_nohaplotig	exon	70534833	70535027	100	-	.	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 161 355 +
Chr2	stalkie_big_nohaplotig	exon	70535082	70535241	100	-	.	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 1 160 +
Chr2	stalkie_big_nohaplotig	CDS	70465518	70465736	.	-	1	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 3400 3618 +
Chr2	stalkie_big_nohaplotig	CDS	70487329	70487397	.	-	1	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 3331 3399 +
Chr2	stalkie_big_nohaplotig	CDS	70513384	70513518	.	-	1	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 3180 3314 +
Chr2	stalkie_big_nohaplotig	CDS	70519091	70519242	.	-	0	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 3028 3179 +
Chr2	stalkie_big_nohaplotig	CDS	70519298	70519509	.	-	2	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 2816 3027 +
Chr2	stalkie_big_nohaplotig	CDS	70519647	70519845	.	-	0	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 2617 2815 +
Chr2	stalkie_big_nohaplotig	CDS	70519906	70520219	.	-	2	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 2303 2616 +
Chr2	stalkie_big_nohaplotig	CDS	70523418	70523505	.	-	0	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 2215 2302 +
Chr2	stalkie_big_nohaplotig	CDS	70523570	70524014	.	-	1	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 1770 2214 +
Chr2	stalkie_big_nohaplotig	CDS	70524158	70524399	.	-	0	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 1528 1769 +
Chr2	stalkie_big_nohaplotig	CDS	70524456	70524698	.	-	0	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 1285 1527 +
Chr2	stalkie_big_nohaplotig	CDS	70524758	70525152	.	-	2	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 890 1284 +
Chr2	stalkie_big_nohaplotig	CDS	70525586	70525621	.	-	2	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 854 889 +
Chr2	stalkie_big_nohaplotig	CDS	70525968	70526178	.	-	0	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 643 853 +
Chr2	stalkie_big_nohaplotig	CDS	70526522	70526808	.	-	2	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 356 642 +
Chr2	stalkie_big_nohaplotig	CDS	70534833	70535027	.	-	2	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 161 355 +
Chr2	stalkie_big_nohaplotig	CDS	70535082	70535241	.	-	0	Parent=FBgn0259214.1.mrna1;Target=FBgn0259214.1 1 160 +
Chr2	gffcl	locus	70465889	70467068	.	+	.	ID=RLOC_00018310;geneIDs=comp149601_c0_seq1.path1;transcripts=comp149601_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70465889	70467068	.	+	.	ID=comp149601_c0_seq1.mrna1;geneID=comp149601_c0_seq1.path1;Name=comp149601_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=1180;mismatches=0;indels=0;unknowns=0;Target=comp149601_c0_seq1 1180 1 .;CDS_Target=comp149601_c0_seq1 541 356 .;locus=RLOC_00018310
Chr2	stalkie_big_nohaplotig	exon	70465889	70467068	100	+	.	Parent=comp149601_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	70466244	70466429	.	+	0	Parent=comp149601_c0_seq1.mrna1
Chr2	gffcl	locus	70467706	70468101	.	+	.	ID=RLOC_00018311;geneIDs=comp115910_c0_seq1.path1;transcripts=comp115910_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70467706	70468101	.	+	.	ID=comp115910_c0_seq1.mrna1;geneID=comp115910_c0_seq1.path1;Name=comp115910_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.5;matches=387;mismatches=9;indels=5;unknowns=0;Target=comp115910_c0_seq1 401 1 .;CDS_Target=comp115910_c0_seq1 321 178 .;locus=RLOC_00018311
Chr2	stalkie_big_nohaplotig	exon	70467706	70468101	96	+	.	Parent=comp115910_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	70467883	70468026	.	+	0	Parent=comp115910_c0_seq1.mrna1
Chr2	gffcl	locus	70469274	70469648	.	+	.	ID=RLOC_00018312;geneIDs=comp928700_c0_seq1.path1;transcripts=comp928700_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70469274	70469648	.	+	.	ID=comp928700_c0_seq1.mrna1;geneID=comp928700_c0_seq1.path1;Name=comp928700_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=375;mismatches=0;indels=0;unknowns=0;Target=comp928700_c0_seq1 375 1 .;CDS_Target=comp928700_c0_seq1 374 279 .;locus=RLOC_00018312
Chr2	stalkie_big_nohaplotig	exon	70469274	70469648	100	+	.	Parent=comp928700_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	70469552	70469647	.	+	0	Parent=comp928700_c0_seq1.mrna1
Chr2	gffcl	locus	70489781	70490482	.	+	.	ID=RLOC_00018313;geneIDs=comp95319_c0_seq1.path1;transcripts=comp95319_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70489781	70490482	.	+	.	ID=comp95319_c0_seq1.mrna1;geneID=comp95319_c0_seq1.path1;Name=comp95319_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=701;mismatches=0;indels=1;unknowns=0;Target=comp95319_c0_seq1 701 1 .;CDS_Target=comp95319_c0_seq1 295 200 .;locus=RLOC_00018313
Chr2	stalkie_big_nohaplotig	exon	70489781	70490482	99	+	.	Parent=comp95319_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	70489980	70490075	.	+	0	Parent=comp95319_c0_seq1.mrna1
Chr2	gffcl	locus	70490768	70491345	.	+	.	ID=RLOC_00018314;geneIDs=comp148317_c0_seq1.path1;transcripts=comp148317_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70490768	70491345	.	+	.	ID=comp148317_c0_seq1.mrna1;geneID=comp148317_c0_seq1.path1;Name=comp148317_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.0;matches=572;mismatches=6;indels=0;unknowns=0;Target=comp148317_c0_seq1 584 7 .;CDS_Target=comp148317_c0_seq1 246 7 .;locus=RLOC_00018314
Chr2	stalkie_big_nohaplotig	exon	70490768	70491345	98	+	.	Parent=comp148317_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	70490768	70491007	.	+	0	Parent=comp148317_c0_seq1.mrna1
Chr2	gffcl	locus	70492652	70493246	.	-	.	ID=RLOC_00018315;geneIDs=comp145940_c0_seq1.path1;transcripts=comp145940_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70492652	70493246	.	-	.	ID=comp145940_c0_seq1.mrna1;geneID=comp145940_c0_seq1.path1;Name=comp145940_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=586;mismatches=9;indels=0;unknowns=0;Target=comp145940_c0_seq1 595 1 .;CDS_Target=comp145940_c0_seq1 538 458 .;locus=RLOC_00018315
Chr2	stalkie_big_nohaplotig	exon	70492652	70493246	98	-	.	Parent=comp145940_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	70492709	70492789	.	-	0	Parent=comp145940_c0_seq1.mrna1
Chr2	gffcl	locus	70493409	70494318	.	+	.	ID=RLOC_00018316;geneIDs=comp142783_c0_seq1.path1;transcripts=comp142783_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70493409	70494318	.	+	.	ID=comp142783_c0_seq1.mrna1;geneID=comp142783_c0_seq1.path1;Name=comp142783_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.7;matches=907;mismatches=3;indels=0;unknowns=0;Target=comp142783_c0_seq1 910 1 .;CDS_Target=comp142783_c0_seq1 159 1 .;locus=RLOC_00018316
Chr2	stalkie_big_nohaplotig	exon	70493409	70494318	99	+	.	Parent=comp142783_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	70493409	70493567	.	+	0	Parent=comp142783_c0_seq1.mrna1
Chr2	gffcl	locus	70496762	70497321	.	-	.	ID=RLOC_00018317;geneIDs=comp115932_c0_seq1.path1;transcripts=comp115932_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70496762	70497321	.	-	.	ID=comp115932_c0_seq1.mrna1;geneID=comp115932_c0_seq1.path1;Name=comp115932_c0_seq1;Dir=indeterminatecoverage=99.5;identity=100.0;matches=560;mismatches=0;indels=0;unknowns=0;Target=comp115932_c0_seq1 563 4 .;CDS_Target=comp115932_c0_seq1 493 299 .;locus=RLOC_00018317
Chr2	stalkie_big_nohaplotig	exon	70496762	70497321	100	-	.	Parent=comp115932_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	70496832	70497026	.	-	0	Parent=comp115932_c0_seq1.mrna1
Chr2	gffcl	locus	70497672	70497910	.	-	.	ID=RLOC_00018318;geneIDs=comp1029965_c0_seq1.path1;transcripts=comp1029965_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70497672	70497910	.	-	.	ID=comp1029965_c0_seq1.mrna1;geneID=comp1029965_c0_seq1.path1;Name=comp1029965_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=239;mismatches=0;indels=0;unknowns=0;Target=comp1029965_c0_seq1 239 1 .;CDS_Target=comp1029965_c0_seq1 144 58 .;locus=RLOC_00018318
Chr2	stalkie_big_nohaplotig	exon	70497672	70497910	100	-	.	Parent=comp1029965_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	70497767	70497853	.	-	0	Parent=comp1029965_c0_seq1.mrna1
Chr2	gffcl	locus	70498284	70498918	.	-	.	ID=RLOC_00018319;geneIDs=comp129129_c1_seq1.path1;transcripts=comp129129_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70498284	70498918	.	-	.	ID=comp129129_c1_seq1.mrna1;geneID=comp129129_c1_seq1.path1;Name=comp129129_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=634;mismatches=1;indels=0;unknowns=0;Target=comp129129_c1_seq1 635 1 .;CDS_Target=comp129129_c1_seq1 492 388 .;locus=RLOC_00018319
Chr2	stalkie_big_nohaplotig	exon	70498284	70498918	99	-	.	Parent=comp129129_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	70498427	70498531	.	-	0	Parent=comp129129_c1_seq1.mrna1
Chr2	gffcl	locus	70503203	70503798	.	+	.	ID=RLOC_00018320;geneIDs=comp145398_c0_seq1.path1;transcripts=comp145398_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70503203	70503798	.	+	.	ID=comp145398_c0_seq1.mrna1;geneID=comp145398_c0_seq1.path1;Name=comp145398_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=596;mismatches=0;indels=0;unknowns=0;Target=comp145398_c0_seq1 596 1 .;CDS_Target=comp145398_c0_seq1 202 2 .;locus=RLOC_00018320
Chr2	stalkie_big_nohaplotig	exon	70503203	70503798	100	+	.	Parent=comp145398_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	70503204	70503404	.	+	0	Parent=comp145398_c0_seq1.mrna1
Chr2	gffcl	locus	70541478	70542437	.	+	.	ID=RLOC_00018321;geneIDs=comp163744_c3_seq1.path1;transcripts=comp163744_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70541478	70542437	.	+	.	ID=comp163744_c3_seq1.mrna1;geneID=comp163744_c3_seq1.path1;Name=comp163744_c3_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=960;mismatches=0;indels=0;unknowns=0;Target=comp163744_c3_seq1 960 1 .;CDS_Target=comp163744_c3_seq1 897 766 .;locus=RLOC_00018321
Chr2	stalkie_big_nohaplotig	exon	70541478	70542437	100	+	.	Parent=comp163744_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	70542243	70542374	.	+	0	Parent=comp163744_c3_seq1.mrna1
Chr2	gffcl	locus	70660251	70661404	.	+	.	ID=RLOC_00018325;geneIDs=comp163261_c0_seq1.path2;transcripts=comp163261_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	70660251	70661404	.	+	.	ID=comp163261_c0_seq1.mrna2;geneID=comp163261_c0_seq1.path2;Name=comp163261_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=1137;mismatches=17;indels=0;unknowns=0;Target=comp163261_c0_seq1 1154 1 .;CDS_Target=comp163261_c0_seq1 953 114 .;locus=RLOC_00018325
Chr2	stalkie_big_nohaplotig	exon	70660251	70661404	98	+	.	Parent=comp163261_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	70660364	70661203	.	+	0	Parent=comp163261_c0_seq1.mrna2
Chr2	gffcl	locus	70662956	70663987	.	+	.	ID=RLOC_00018326;geneIDs=Dp_FBgn0244711.1.path8;transcripts=Dp_FBgn0244711.1.mrna8
Chr2	stalkie_big_nohaplotig	mRNA	70662956	70663987	.	+	.	ID=Dp_FBgn0244711.1.mrna8;geneID=Dp_FBgn0244711.1.path8;Name=Dp_FBgn0244711.1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1020;mismatches=12;indels=0;unknowns=0;Target=Dp_FBgn0244711.1 1032 1 .;locus=RLOC_00018326
Chr2	stalkie_big_nohaplotig	exon	70662956	70663987	98	+	.	Parent=Dp_FBgn0244711.1.mrna8
Chr2	stalkie_big_nohaplotig	CDS	70662956	70663987	.	+	0	Parent=Dp_FBgn0244711.1.mrna8
Chr2	gffcl	locus	70710893	70711717	.	+	.	ID=RLOC_00018327;geneIDs=comp162183_c4_seq1.path2;transcripts=comp162183_c4_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	70710893	70711717	.	+	.	ID=comp162183_c4_seq1.mrna2;geneID=comp162183_c4_seq1.path2;Name=comp162183_c4_seq1;Dir=indeterminatecoverage=73.2;identity=98.2;matches=811;mismatches=11;indels=4;unknowns=0;Target=comp162183_c4_seq1 1079 257 .;CDS_Target=comp162183_c4_seq1 807 652 .;locus=RLOC_00018327
Chr2	stalkie_big_nohaplotig	exon	70710893	70711717	98	+	.	Parent=comp162183_c4_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	70711291	70711446	.	+	0	Parent=comp162183_c4_seq1.mrna2
Chr2	gffcl	locus	70740623	70742486	.	+	.	ID=RLOC_00018329;geneIDs=FBgn0039909.1.path1;transcripts=FBgn0039909.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70740623	70742486	.	+	.	ID=FBgn0039909.1.mrna1;geneID=FBgn0039909.1.path1;Name=FBgn0039909.1;Dir=sensecoverage=100.0;identity=100.0;matches=1419;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018329
Chr2	stalkie_big_nohaplotig	exon	70740623	70740732	100	+	.	Parent=FBgn0039909.1.mrna1;Target=FBgn0039909.1 1 110 +
Chr2	stalkie_big_nohaplotig	exon	70740885	70741006	100	+	.	Parent=FBgn0039909.1.mrna1;Target=FBgn0039909.1 111 232 +
Chr2	stalkie_big_nohaplotig	exon	70741065	70741174	100	+	.	Parent=FBgn0039909.1.mrna1;Target=FBgn0039909.1 233 342 +
Chr2	stalkie_big_nohaplotig	exon	70741227	70741428	100	+	.	Parent=FBgn0039909.1.mrna1;Target=FBgn0039909.1 343 544 +
Chr2	stalkie_big_nohaplotig	exon	70741559	70741746	100	+	.	Parent=FBgn0039909.1.mrna1;Target=FBgn0039909.1 545 732 +
Chr2	stalkie_big_nohaplotig	exon	70741800	70742486	100	+	.	Parent=FBgn0039909.1.mrna1;Target=FBgn0039909.1 733 1419 +
Chr2	stalkie_big_nohaplotig	CDS	70740623	70740732	.	+	0	Parent=FBgn0039909.1.mrna1;Target=FBgn0039909.1 1 110 +
Chr2	stalkie_big_nohaplotig	CDS	70740885	70741006	.	+	1	Parent=FBgn0039909.1.mrna1;Target=FBgn0039909.1 111 232 +
Chr2	stalkie_big_nohaplotig	CDS	70741065	70741174	.	+	2	Parent=FBgn0039909.1.mrna1;Target=FBgn0039909.1 233 342 +
Chr2	stalkie_big_nohaplotig	CDS	70741227	70741428	.	+	0	Parent=FBgn0039909.1.mrna1;Target=FBgn0039909.1 343 544 +
Chr2	stalkie_big_nohaplotig	CDS	70741559	70741746	.	+	2	Parent=FBgn0039909.1.mrna1;Target=FBgn0039909.1 545 732 +
Chr2	stalkie_big_nohaplotig	CDS	70741800	70742486	.	+	0	Parent=FBgn0039909.1.mrna1;Target=FBgn0039909.1 733 1419 +
Chr2	gffcl	locus	70781607	70782396	.	+	.	ID=RLOC_00018330;geneIDs=comp160242_c3_seq1.path1;transcripts=comp160242_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70781607	70782396	.	+	.	ID=comp160242_c3_seq1.mrna1;geneID=comp160242_c3_seq1.path1;Name=comp160242_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=789;mismatches=1;indels=0;unknowns=0;Target=comp160242_c3_seq1 790 1 .;CDS_Target=comp160242_c3_seq1 574 431 .;locus=RLOC_00018330
Chr2	stalkie_big_nohaplotig	exon	70781607	70782396	99	+	.	Parent=comp160242_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	70782037	70782180	.	+	0	Parent=comp160242_c3_seq1.mrna1
Chr2	gffcl	locus	70798592	70799622	.	+	.	ID=RLOC_00018331;geneIDs=comp157992_c2_seq1.path1;transcripts=comp157992_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70798592	70799622	.	+	.	ID=comp157992_c2_seq1.mrna1;geneID=comp157992_c2_seq1.path1;Name=comp157992_c2_seq1;Dir=indeterminatecoverage=32.5;identity=99.9;matches=1030;mismatches=1;indels=0;unknowns=0;Target=comp157992_c2_seq1 1031 1 .;locus=RLOC_00018331
Chr2	stalkie_big_nohaplotig	exon	70798592	70799622	99	+	.	Parent=comp157992_c2_seq1.mrna1
Chr2	gffcl	locus	70801213	70802536	.	-	.	ID=RLOC_00018332;geneIDs=comp142813_c1_seq1.path1,comp151772_c0_seq1.path1;transcripts=comp151772_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70801213	70802310	.	-	.	ID=comp151772_c0_seq1.mrna1;geneID=comp151772_c0_seq1.path1;Name=comp151772_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1098;mismatches=0;indels=0;unknowns=0;Target=comp151772_c0_seq1 1098 1 .;CDS_Target=comp151772_c0_seq1 562 338 .;locus=RLOC_00018332
Chr2	stalkie_big_nohaplotig	exon	70801213	70802310	100	-	.	Parent=comp151772_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	70801749	70801973	.	-	0	Parent=comp151772_c0_seq1.mrna1
Chr2	gffcl	locus	70802998	70803254	.	+	.	ID=RLOC_00018333;geneIDs=comp49406_c0_seq1.path1;transcripts=comp49406_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70802998	70803254	.	+	.	ID=comp49406_c0_seq1.mrna1;geneID=comp49406_c0_seq1.path1;Name=comp49406_c0_seq1;Dir=indeterminatecoverage=93.8;identity=100.0;matches=257;mismatches=0;indels=0;unknowns=0;Target=comp49406_c0_seq1 274 18 .;CDS_Target=comp49406_c0_seq1 119 18 .;locus=RLOC_00018333
Chr2	stalkie_big_nohaplotig	exon	70802998	70803254	100	+	.	Parent=comp49406_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	70802998	70803099	.	+	0	Parent=comp49406_c0_seq1.mrna1
Chr2	gffcl	locus	70803722	70804391	.	+	.	ID=RLOC_00018334;geneIDs=comp119022_c0_seq1.path1;transcripts=comp119022_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70803722	70804391	.	+	.	ID=comp119022_c0_seq1.mrna1;geneID=comp119022_c0_seq1.path1;Name=comp119022_c0_seq1;Dir=indeterminatecoverage=99.1;identity=98.8;matches=662;mismatches=8;indels=0;unknowns=0;Target=comp119022_c0_seq1 670 1 .;CDS_Target=comp119022_c0_seq1 650 552 .;locus=RLOC_00018334
Chr2	stalkie_big_nohaplotig	exon	70803722	70804391	98	+	.	Parent=comp119022_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	70804273	70804371	.	+	0	Parent=comp119022_c0_seq1.mrna1
Chr2	gffcl	locus	70862438	70863278	.	+	.	ID=RLOC_00018336;geneIDs=comp491679_c0_seq1.path1;transcripts=comp491679_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70862438	70863278	.	+	.	ID=comp491679_c0_seq1.mrna1;geneID=comp491679_c0_seq1.path1;Name=comp491679_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=839;mismatches=2;indels=0;unknowns=0;Target=comp491679_c0_seq1 841 1 .;CDS_Target=comp491679_c0_seq1 352 158 .;locus=RLOC_00018336
Chr2	stalkie_big_nohaplotig	exon	70862438	70863278	99	+	.	Parent=comp491679_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	70862595	70862789	.	+	0	Parent=comp491679_c0_seq1.mrna1
Chr2	gffcl	locus	70957505	70957583	.	-	.	ID=RLOC_00018337;geneIDs=comp810432_c0_seq1.path1;transcripts=comp810432_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	70957505	70957583	.	-	.	ID=comp810432_c0_seq1.mrna1;geneID=comp810432_c0_seq1.path1;Name=comp810432_c0_seq1;Dir=indeterminatecoverage=15.6;identity=100.0;matches=79;mismatches=0;indels=0;unknowns=0;Target=comp810432_c0_seq1 79 1 .;locus=RLOC_00018337
Chr2	stalkie_big_nohaplotig	exon	70957505	70957583	100	-	.	Parent=comp810432_c0_seq1.mrna1
Chr2	gffcl	locus	71099624	71101536	.	+	.	ID=RLOC_00018339;geneIDs=FBgn0010620.1.path1;transcripts=FBgn0010620.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	71099624	71101536	.	+	.	ID=FBgn0010620.1.mrna1;geneID=FBgn0010620.1.path1;Name=FBgn0010620.1;Dir=sensecoverage=100.0;identity=100.0;matches=849;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018339
Chr2	stalkie_big_nohaplotig	exon	71099624	71099645	100	+	.	Parent=FBgn0010620.1.mrna1;Target=FBgn0010620.1 1 22 +
Chr2	stalkie_big_nohaplotig	exon	71100710	71101536	100	+	.	Parent=FBgn0010620.1.mrna1;Target=FBgn0010620.1 23 849 +
Chr2	stalkie_big_nohaplotig	CDS	71099624	71099645	.	+	0	Parent=FBgn0010620.1.mrna1;Target=FBgn0010620.1 1 22 +
Chr2	stalkie_big_nohaplotig	CDS	71100710	71101536	.	+	2	Parent=FBgn0010620.1.mrna1;Target=FBgn0010620.1 23 849 +
Chr2	gffcl	locus	71106047	71106084	.	+	.	ID=RLOC_00018340;geneIDs=comp162970_c5_seq1.path2;transcripts=comp162970_c5_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	71106047	71106084	.	+	.	ID=comp162970_c5_seq1.mrna2;geneID=comp162970_c5_seq1.path2;Name=comp162970_c5_seq1;Dir=indeterminatecoverage=7.0;identity=100.0;matches=38;mismatches=0;indels=0;unknowns=0;Target=comp162970_c5_seq1 545 508 .;locus=RLOC_00018340
Chr2	stalkie_big_nohaplotig	exon	71106047	71106084	100	+	.	Parent=comp162970_c5_seq1.mrna2
Chr2	gffcl	locus	71145008	71146290	.	-	.	ID=RLOC_00018341;geneIDs=comp155712_c0_seq1.path1;transcripts=comp155712_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	71145008	71146290	.	-	.	ID=comp155712_c0_seq1.mrna1;geneID=comp155712_c0_seq1.path1;Name=comp155712_c0_seq1;Dir=indeterminatecoverage=86.1;identity=87.3;matches=1126;mismatches=109;indels=55;unknowns=0;Target=comp155712_c0_seq1 571 197 .;locus=RLOC_00018341
Chr2	stalkie_big_nohaplotig	exon	71145008	71146165	87	-	.	Parent=comp155712_c0_seq1.mrna1;Target=comp155712_c0_seq1 1314 190 .
Chr2	stalkie_big_nohaplotig	exon	71146167	71146290	87	-	.	Parent=comp155712_c0_seq1.mrna1;Target=comp155712_c0_seq1 173 56 .
Chr2	stalkie_big_nohaplotig	CDS	71145784	71146158	.	-	0	Parent=comp155712_c0_seq1.mrna1
Chr2	gffcl	locus	71169667	71172591	.	-	.	ID=RLOC_00018342;geneIDs=FBgn0005564.1.path1;transcripts=FBgn0005564.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	71169667	71172591	.	-	.	ID=FBgn0005564.1.mrna1;geneID=FBgn0005564.1.path1;Name=FBgn0005564.1;Dir=sensecoverage=100.0;identity=100.0;matches=1779;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018342
Chr2	stalkie_big_nohaplotig	exon	71169667	71169759	100	-	.	Parent=FBgn0005564.1.mrna1;Target=FBgn0005564.1 1687 1779 +
Chr2	stalkie_big_nohaplotig	exon	71169810	71169962	100	-	.	Parent=FBgn0005564.1.mrna1;Target=FBgn0005564.1 1534 1686 +
Chr2	stalkie_big_nohaplotig	exon	71170939	71171127	100	-	.	Parent=FBgn0005564.1.mrna1;Target=FBgn0005564.1 1345 1533 +
Chr2	stalkie_big_nohaplotig	exon	71171190	71171352	100	-	.	Parent=FBgn0005564.1.mrna1;Target=FBgn0005564.1 1182 1344 +
Chr2	stalkie_big_nohaplotig	exon	71171411	71172591	100	-	.	Parent=FBgn0005564.1.mrna1;Target=FBgn0005564.1 1 1181 +
Chr2	stalkie_big_nohaplotig	CDS	71169667	71169759	.	-	0	Parent=FBgn0005564.1.mrna1;Target=FBgn0005564.1 1687 1779 +
Chr2	stalkie_big_nohaplotig	CDS	71169810	71169962	.	-	0	Parent=FBgn0005564.1.mrna1;Target=FBgn0005564.1 1534 1686 +
Chr2	stalkie_big_nohaplotig	CDS	71170939	71171127	.	-	0	Parent=FBgn0005564.1.mrna1;Target=FBgn0005564.1 1345 1533 +
Chr2	stalkie_big_nohaplotig	CDS	71171190	71171352	.	-	1	Parent=FBgn0005564.1.mrna1;Target=FBgn0005564.1 1182 1344 +
Chr2	stalkie_big_nohaplotig	CDS	71171411	71172591	.	-	0	Parent=FBgn0005564.1.mrna1;Target=FBgn0005564.1 1 1181 +
Chr2	gffcl	locus	71258988	71260928	.	+	.	ID=RLOC_00018343;geneIDs=comp163611_c0_seq1.path9;transcripts=comp163611_c0_seq1.mrna9
Chr2	stalkie_big_nohaplotig	mRNA	71258988	71260928	.	+	.	ID=comp163611_c0_seq1.mrna9;geneID=comp163611_c0_seq1.path9;Name=comp163611_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1933;mismatches=8;indels=0;unknowns=0;Target=comp163611_c0_seq1 1941 1 .;locus=RLOC_00018343
Chr2	stalkie_big_nohaplotig	exon	71258988	71260928	99	+	.	Parent=comp163611_c0_seq1.mrna9
Chr2	stalkie_big_nohaplotig	CDS	71258988	71260928	.	+	0	Parent=comp163611_c0_seq1.mrna9
Chr2	gffcl	locus	71334076	71394615	.	+	.	ID=RLOC_00018346;geneIDs=FBgn0024728.1.path1;transcripts=FBgn0024728.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	71334076	71394615	.	+	.	ID=FBgn0024728.1.mrna1;geneID=FBgn0024728.1.path1;Name=FBgn0024728.1;Dir=sensecoverage=100.0;identity=99.9;matches=1967;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018346
Chr2	stalkie_big_nohaplotig	exon	71334076	71334994	99	+	.	Parent=FBgn0024728.1.mrna1;Target=FBgn0024728.1 1 919 +
Chr2	stalkie_big_nohaplotig	exon	71356917	71357146	100	+	.	Parent=FBgn0024728.1.mrna1;Target=FBgn0024728.1 920 1149 +
Chr2	stalkie_big_nohaplotig	exon	71393797	71394615	100	+	.	Parent=FBgn0024728.1.mrna1;Target=FBgn0024728.1 1150 1968 +
Chr2	stalkie_big_nohaplotig	CDS	71334076	71334994	.	+	0	Parent=FBgn0024728.1.mrna1;Target=FBgn0024728.1 1 919 +
Chr2	stalkie_big_nohaplotig	CDS	71356917	71357146	.	+	2	Parent=FBgn0024728.1.mrna1;Target=FBgn0024728.1 920 1149 +
Chr2	stalkie_big_nohaplotig	CDS	71393797	71394615	.	+	0	Parent=FBgn0024728.1.mrna1;Target=FBgn0024728.1 1150 1968 +
Chr2	gffcl	locus	71378780	71379339	.	+	.	ID=RLOC_00018347;geneIDs=comp163656_c0_seq1.path2;transcripts=comp163656_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	71378780	71379339	.	+	.	ID=comp163656_c0_seq1.mrna2;geneID=comp163656_c0_seq1.path2;Name=comp163656_c0_seq1;Dir=indeterminatecoverage=60.6;identity=99.5;matches=557;mismatches=3;indels=0;unknowns=0;Target=comp163656_c0_seq1 924 365 .;CDS_Target=comp163656_c0_seq1 447 365 .;locus=RLOC_00018347
Chr2	stalkie_big_nohaplotig	exon	71378780	71379339	99	+	.	Parent=comp163656_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	71378780	71378862	.	+	1	Parent=comp163656_c0_seq1.mrna2
Chr2	gffcl	locus	71391503	71392974	.	+	.	ID=RLOC_00018348;geneIDs=comp161959_c1_seq1.path6;transcripts=comp161959_c1_seq1.mrna6
Chr2	stalkie_big_nohaplotig	mRNA	71391503	71392974	.	+	.	ID=comp161959_c1_seq1.mrna6;geneID=comp161959_c1_seq1.path6;Name=comp161959_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1463;mismatches=9;indels=0;unknowns=0;Target=comp161959_c1_seq1 1472 1 .;CDS_Target=comp161959_c1_seq1 1265 453 .;locus=RLOC_00018348
Chr2	stalkie_big_nohaplotig	exon	71391503	71392974	99	+	.	Parent=comp161959_c1_seq1.mrna6
Chr2	stalkie_big_nohaplotig	CDS	71391955	71392767	.	+	0	Parent=comp161959_c1_seq1.mrna6
Chr2	gffcl	locus	71397056	71399023	.	+	.	ID=RLOC_00018349;geneIDs=comp160732_c3_seq1.path1;transcripts=comp160732_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	71397056	71399023	.	+	.	ID=comp160732_c3_seq1.mrna1;geneID=comp160732_c3_seq1.path1;Name=comp160732_c3_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=1968;mismatches=0;indels=0;unknowns=0;Target=comp160732_c3_seq1 1968 1 .;CDS_Target=comp160732_c3_seq1 643 386 .;locus=RLOC_00018349
Chr2	stalkie_big_nohaplotig	exon	71397056	71399023	100	+	.	Parent=comp160732_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	71397441	71397698	.	+	0	Parent=comp160732_c3_seq1.mrna1
Chr2	gffcl	locus	71401484	71401707	.	+	.	ID=RLOC_00018350;geneIDs=comp159671_c1_seq1.path1;transcripts=comp159671_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	71401484	71401707	.	+	.	ID=comp159671_c1_seq1.mrna1;geneID=comp159671_c1_seq1.path1;Name=comp159671_c1_seq1;Dir=indeterminatecoverage=32.9;identity=100.0;matches=224;mismatches=0;indels=0;unknowns=0;Target=comp159671_c1_seq1 249 26 .;locus=RLOC_00018350
Chr2	stalkie_big_nohaplotig	exon	71401484	71401707	100	+	.	Parent=comp159671_c1_seq1.mrna1
Chr2	gffcl	locus	71403330	71404549	.	+	.	ID=RLOC_00018351;geneIDs=AAEL017378.path4;transcripts=AAEL017378.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	71403330	71404549	.	+	.	ID=AAEL017378.mrna4;geneID=AAEL017378.path4;Name=AAEL017378;Dir=indeterminatecoverage=100.0;identity=97.2;matches=1219;mismatches=1;indels=34;unknowns=0;Target=AAEL017378 1254 1 .;locus=RLOC_00018351
Chr2	stalkie_big_nohaplotig	exon	71403330	71404549	97	+	.	Parent=AAEL017378.mrna4
Chr2	stalkie_big_nohaplotig	CDS	71403330	71404549	.	+	0	Parent=AAEL017378.mrna4
Chr2	gffcl	locus	71412409	71412955	.	-	.	ID=RLOC_00018352;geneIDs=comp134874_c0_seq1.path1;transcripts=comp134874_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	71412409	71412955	.	-	.	ID=comp134874_c0_seq1.mrna1;geneID=comp134874_c0_seq1.path1;Name=comp134874_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=547;mismatches=0;indels=0;unknowns=0;Target=comp134874_c0_seq1 547 1 .;CDS_Target=comp134874_c0_seq1 168 106 .;locus=RLOC_00018352
Chr2	stalkie_big_nohaplotig	exon	71412409	71412955	100	-	.	Parent=comp134874_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	71412788	71412850	.	-	0	Parent=comp134874_c0_seq1.mrna1
Chr2	gffcl	locus	71544162	71545148	.	+	.	ID=RLOC_00018354;geneIDs=ORF1835.path4;transcripts=ORF1835.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	71544162	71545148	.	+	.	ID=ORF1835.mrna4;geneID=ORF1835.path4;Name=ORF1835;Dir=indeterminatecoverage=100.0;identity=98.7;matches=974;mismatches=13;indels=0;unknowns=0;Target=ORF1835 987 1 .;CDS_Target=ORF1835 987 106 .;locus=RLOC_00018354
Chr2	stalkie_big_nohaplotig	exon	71544162	71545148	98	+	.	Parent=ORF1835.mrna4
Chr2	stalkie_big_nohaplotig	CDS	71544267	71545148	.	+	0	Parent=ORF1835.mrna4
Chr2	gffcl	locus	71707508	71708818	.	+	.	ID=RLOC_00018356;geneIDs=comp146844_c0_seq1.path1;transcripts=comp146844_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	71707508	71708818	.	+	.	ID=comp146844_c0_seq1.mrna1;geneID=comp146844_c0_seq1.path1;Name=comp146844_c0_seq1;Dir=antisensecoverage=97.4;identity=99.9;matches=866;mismatches=0;indels=1;unknowns=0;locus=RLOC_00018356
Chr2	stalkie_big_nohaplotig	exon	71707508	71707657	100	+	.	Parent=comp146844_c0_seq1.mrna1;Target=comp146844_c0_seq1 741 890 -
Chr2	stalkie_big_nohaplotig	exon	71707976	71708092	100	+	.	Parent=comp146844_c0_seq1.mrna1;Target=comp146844_c0_seq1 624 740 -
Chr2	stalkie_big_nohaplotig	exon	71708143	71708252	100	+	.	Parent=comp146844_c0_seq1.mrna1;Target=comp146844_c0_seq1 514 623 -
Chr2	stalkie_big_nohaplotig	exon	71708330	71708818	99	+	.	Parent=comp146844_c0_seq1.mrna1;Target=comp146844_c0_seq1 24 513 -
Chr2	stalkie_big_nohaplotig	CDS	71707646	71707657	.	+	0	Parent=comp146844_c0_seq1.mrna1;Target=comp146844_c0_seq1 741 752 .
Chr2	stalkie_big_nohaplotig	CDS	71707976	71708092	.	+	0	Parent=comp146844_c0_seq1.mrna1;Target=comp146844_c0_seq1 624 740 .
Chr2	stalkie_big_nohaplotig	CDS	71708143	71708181	.	+	0	Parent=comp146844_c0_seq1.mrna1;Target=comp146844_c0_seq1 585 623 .
Chr2	gffcl	locus	71726567	71730546	.	-	.	ID=RLOC_00018357;geneIDs=comp163889_c0_seq1.path1;transcripts=comp163889_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	71726567	71730546	.	-	.	ID=comp163889_c0_seq1.mrna1;geneID=comp163889_c0_seq1.path1;Name=comp163889_c0_seq1;Dir=indeterminatecoverage=98.0;identity=93.2;matches=3743;mismatches=234;indels=39;unknowns=0;Target=comp163889_c0_seq1 4066 54 .;CDS_Target=comp163889_c0_seq1 3831 1591 .;locus=RLOC_00018357
Chr2	stalkie_big_nohaplotig	exon	71726567	71730546	93	-	.	Parent=comp163889_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	71726801	71729017	.	-	0	Parent=comp163889_c0_seq1.mrna1
Chr2	gffcl	locus	71907741	72751383	.	.	.	ID=RLOC_00018359;geneIDs=FBgn0001991.1.path1,FBgn0005642.1.path1,comp5191_c0_seq1.path1,comp116879_c0_seq1.path1,comp122950_c0_seq1.path1,comp148980_c1_seq1.path1,comp159964_c0_seq1.path1,comp163943_c1_seq1.path1;transcripts=comp148980_c1_seq1.mrna1,FBgn0001991.1.mrna1,comp163943_c1_seq1.mrna1,comp159964_c0_seq1.mrna1,comp116879_c0_seq1.mrna1,comp122950_c0_seq1.mrna1,FBgn0005642.1.mrna1,comp5191_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	71907741	72751383	.	-	.	ID=comp148980_c1_seq1.mrna1;geneID=comp148980_c1_seq1.path1;Name=comp148980_c1_seq1;Dir=antisensecoverage=96.3;identity=96.4;matches=6442;mismatches=102;indels=140;unknowns=0;locus=RLOC_00018359
Chr2	stalkie_big_nohaplotig	exon	71907741	71908130	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 4 393 -
Chr2	stalkie_big_nohaplotig	exon	71908190	71908320	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 394 524 -
Chr2	stalkie_big_nohaplotig	exon	71953197	71953237	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 525 565 -
Chr2	stalkie_big_nohaplotig	exon	71953315	71953694	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 566 945 -
Chr2	stalkie_big_nohaplotig	exon	72005024	72005684	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 946 1606 -
Chr2	stalkie_big_nohaplotig	exon	72009324	72009331	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 1607 1614 -
Chr2	stalkie_big_nohaplotig	exon	72048303	72048306	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 1756 1759 -
Chr2	stalkie_big_nohaplotig	exon	72053489	72053494	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 1760 1765 -
Chr2	stalkie_big_nohaplotig	exon	72054683	72054690	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 1766 1773 -
Chr2	stalkie_big_nohaplotig	exon	72066991	72066993	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 1829 1831 -
Chr2	stalkie_big_nohaplotig	exon	72078142	72078154	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 1832 1844 -
Chr2	stalkie_big_nohaplotig	exon	72091559	72091621	47	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 1884 1953 -
Chr2	stalkie_big_nohaplotig	exon	72094084	72094091	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 2020 2027 -
Chr2	stalkie_big_nohaplotig	exon	72098022	72098084	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 2041 2103 -
Chr2	stalkie_big_nohaplotig	exon	72113844	72113927	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 2104 2187 -
Chr2	stalkie_big_nohaplotig	exon	72129126	72129597	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 2188 2659 -
Chr2	stalkie_big_nohaplotig	exon	72134359	72134505	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 2660 2806 -
Chr2	stalkie_big_nohaplotig	exon	72138612	72138664	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 2807 2859 -
Chr2	stalkie_big_nohaplotig	exon	72159813	72159920	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 2860 2967 -
Chr2	stalkie_big_nohaplotig	exon	72171385	72171472	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 2968 3055 -
Chr2	stalkie_big_nohaplotig	exon	72171544	72171710	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 3056 3222 -
Chr2	stalkie_big_nohaplotig	exon	72176813	72176942	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 3223 3352 -
Chr2	stalkie_big_nohaplotig	exon	72216032	72216161	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 3353 3482 -
Chr2	stalkie_big_nohaplotig	exon	72222211	72222269	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 3483 3541 -
Chr2	stalkie_big_nohaplotig	exon	72222698	72223020	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 3542 3864 -
Chr2	stalkie_big_nohaplotig	exon	72223303	72223513	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 3865 4075 -
Chr2	stalkie_big_nohaplotig	exon	72243288	72243513	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 4076 4301 -
Chr2	stalkie_big_nohaplotig	exon	72243572	72244091	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 4302 4821 -
Chr2	stalkie_big_nohaplotig	exon	72244188	72244366	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 4822 5000 -
Chr2	stalkie_big_nohaplotig	exon	72294625	72294777	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 5001 5153 -
Chr2	stalkie_big_nohaplotig	exon	72294838	72294944	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 5154 5260 -
Chr2	stalkie_big_nohaplotig	exon	72313045	72313184	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 5261 5400 -
Chr2	stalkie_big_nohaplotig	exon	72341695	72342088	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 5401 5794 -
Chr2	stalkie_big_nohaplotig	exon	72363091	72363095	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 5795 5799 -
Chr2	stalkie_big_nohaplotig	exon	72382289	72382299	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 5800 5810 -
Chr2	stalkie_big_nohaplotig	exon	72397938	72397946	66	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 5811 5819 -
Chr2	stalkie_big_nohaplotig	exon	72407722	72407733	91	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 5820 5831 -
Chr2	stalkie_big_nohaplotig	exon	72424910	72424921	83	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 5832 5843 -
Chr2	stalkie_big_nohaplotig	exon	72439010	72439055	63	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 5844 5887 -
Chr2	stalkie_big_nohaplotig	exon	72447712	72447720	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 5888 5896 -
Chr2	stalkie_big_nohaplotig	exon	72449255	72449262	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 5897 5904 -
Chr2	stalkie_big_nohaplotig	exon	72452905	72452909	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 5905 5909 -
Chr2	stalkie_big_nohaplotig	exon	72458614	72458622	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 5910 5918 -
Chr2	stalkie_big_nohaplotig	exon	72461363	72461364	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 5923 5924 -
Chr2	stalkie_big_nohaplotig	exon	72464948	72464965	38	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 5925 5971 -
Chr2	stalkie_big_nohaplotig	exon	72466321	72466326	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6031 6036 -
Chr2	stalkie_big_nohaplotig	exon	72468102	72468112	81	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6037 6047 -
Chr2	stalkie_big_nohaplotig	exon	72471380	72471385	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6048 6053 -
Chr2	stalkie_big_nohaplotig	exon	72475865	72475918	58	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6054 6126 -
Chr2	stalkie_big_nohaplotig	exon	72495112	72495117	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6127 6132 -
Chr2	stalkie_big_nohaplotig	exon	72496757	72496766	80	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6133 6142 -
Chr2	stalkie_big_nohaplotig	exon	72496773	72496780	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6201 6208 -
Chr2	stalkie_big_nohaplotig	exon	72497844	72497845	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6209 6210 -
Chr2	stalkie_big_nohaplotig	exon	72498998	72499001	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6211 6214 -
Chr2	stalkie_big_nohaplotig	exon	72499054	72499062	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6215 6223 -
Chr2	stalkie_big_nohaplotig	exon	72501203	72501205	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6224 6226 -
Chr2	stalkie_big_nohaplotig	exon	72506113	72506124	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6227 6238 -
Chr2	stalkie_big_nohaplotig	exon	72507473	72507481	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6239 6247 -
Chr2	stalkie_big_nohaplotig	exon	72512359	72512361	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6248 6250 -
Chr2	stalkie_big_nohaplotig	exon	72526339	72526340	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6251 6252 -
Chr2	stalkie_big_nohaplotig	exon	72531106	72531114	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6253 6261 -
Chr2	stalkie_big_nohaplotig	exon	72543185	72543196	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6262 6273 -
Chr2	stalkie_big_nohaplotig	exon	72567342	72567344	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6274 6276 -
Chr2	stalkie_big_nohaplotig	exon	72568683	72568690	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6277 6284 -
Chr2	stalkie_big_nohaplotig	exon	72568693	72568698	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6336 6341 -
Chr2	stalkie_big_nohaplotig	exon	72583046	72583053	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6342 6349 -
Chr2	stalkie_big_nohaplotig	exon	72584913	72584922	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6445 6454 -
Chr2	stalkie_big_nohaplotig	exon	72622078	72622147	38	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6480 6595 -
Chr2	stalkie_big_nohaplotig	exon	72627086	72627096	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6596 6606 -
Chr2	stalkie_big_nohaplotig	exon	72655173	72655234	51	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6622 6675 -
Chr2	stalkie_big_nohaplotig	exon	72662832	72662833	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6735 6736 -
Chr2	stalkie_big_nohaplotig	exon	72687939	72687944	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6737 6742 -
Chr2	stalkie_big_nohaplotig	exon	72691713	72691722	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6743 6752 -
Chr2	stalkie_big_nohaplotig	exon	72693483	72693514	63	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6753 6781 -
Chr2	stalkie_big_nohaplotig	exon	72698479	72698486	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6782 6789 -
Chr2	stalkie_big_nohaplotig	exon	72698493	72698497	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6825 6829 -
Chr2	stalkie_big_nohaplotig	exon	72704441	72704444	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6830 6833 -
Chr2	stalkie_big_nohaplotig	exon	72726739	72726744	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6834 6839 -
Chr2	stalkie_big_nohaplotig	exon	72733399	72733400	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6840 6841 -
Chr2	stalkie_big_nohaplotig	exon	72744115	72744119	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6842 6846 -
Chr2	stalkie_big_nohaplotig	exon	72750859	72751383	100	-	.	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 6847 7371 -
Chr2	stalkie_big_nohaplotig	CDS	71907969	71908130	.	-	0	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 232 393 .
Chr2	stalkie_big_nohaplotig	CDS	71908190	71908320	.	-	2	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 394 524 .
Chr2	stalkie_big_nohaplotig	CDS	71953197	71953237	.	-	1	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 525 565 .
Chr2	stalkie_big_nohaplotig	CDS	71953315	71953694	.	-	0	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 566 945 .
Chr2	stalkie_big_nohaplotig	CDS	72005024	72005684	.	-	1	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 946 1606 .
Chr2	stalkie_big_nohaplotig	CDS	72009324	72009331	.	-	0	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 1607 1614 .
Chr2	stalkie_big_nohaplotig	CDS	72048303	72048306	.	-	1	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 1756 1759 .
Chr2	stalkie_big_nohaplotig	CDS	72053489	72053494	.	-	1	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 1760 1765 .
Chr2	stalkie_big_nohaplotig	CDS	72054683	72054690	.	-	0	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 1766 1773 .
Chr2	stalkie_big_nohaplotig	CDS	72066991	72066993	.	-	0	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 1829 1831 .
Chr2	stalkie_big_nohaplotig	CDS	72078142	72078154	.	-	1	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 1832 1844 .
Chr2	stalkie_big_nohaplotig	CDS	72091559	72091621	.	-	1	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 1884 1953 .
Chr2	stalkie_big_nohaplotig	CDS	72094084	72094091	.	-	0	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 2020 2027 .
Chr2	stalkie_big_nohaplotig	CDS	72098022	72098084	.	-	0	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 2041 2103 .
Chr2	stalkie_big_nohaplotig	CDS	72113844	72113927	.	-	0	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 2104 2187 .
Chr2	stalkie_big_nohaplotig	CDS	72129126	72129597	.	-	1	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 2188 2659 .
Chr2	stalkie_big_nohaplotig	CDS	72134359	72134505	.	-	1	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 2660 2806 .
Chr2	stalkie_big_nohaplotig	CDS	72138612	72138664	.	-	0	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 2807 2859 .
Chr2	stalkie_big_nohaplotig	CDS	72159813	72159920	.	-	0	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 2860 2967 .
Chr2	stalkie_big_nohaplotig	CDS	72171385	72171472	.	-	1	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 2968 3055 .
Chr2	stalkie_big_nohaplotig	CDS	72171544	72171710	.	-	0	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 3056 3222 .
Chr2	stalkie_big_nohaplotig	CDS	72176813	72176942	.	-	1	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 3223 3352 .
Chr2	stalkie_big_nohaplotig	CDS	72216032	72216161	.	-	2	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 3353 3482 .
Chr2	stalkie_big_nohaplotig	CDS	72222211	72222269	.	-	1	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 3483 3541 .
Chr2	stalkie_big_nohaplotig	CDS	72222698	72223020	.	-	0	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 3542 3864 .
Chr2	stalkie_big_nohaplotig	CDS	72223303	72223513	.	-	1	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 3865 4075 .
Chr2	stalkie_big_nohaplotig	CDS	72243288	72243513	.	-	2	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 4076 4301 .
Chr2	stalkie_big_nohaplotig	CDS	72243572	72244091	.	-	0	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 4302 4821 .
Chr2	stalkie_big_nohaplotig	CDS	72244188	72244366	.	-	2	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 4822 5000 .
Chr2	stalkie_big_nohaplotig	CDS	72294625	72294777	.	-	2	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 5001 5153 .
Chr2	stalkie_big_nohaplotig	CDS	72294838	72294944	.	-	1	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 5154 5260 .
Chr2	stalkie_big_nohaplotig	CDS	72313045	72313136	.	-	0	Parent=comp148980_c1_seq1.mrna1;Target=comp148980_c1_seq1 5261 5352 .
Chr2	stalkie_big_nohaplotig	mRNA	71907972	72644981	.	-	.	ID=FBgn0001991.1.mrna1;geneID=FBgn0001991.1.path1;Name=FBgn0001991.1;Dir=sensecoverage=88.9;identity=96.4;matches=5496;mismatches=96;indels=108;unknowns=0;locus=RLOC_00018359
Chr2	stalkie_big_nohaplotig	exon	71907972	71908130	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 6982 7140 +
Chr2	stalkie_big_nohaplotig	exon	71908190	71908320	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 6851 6981 +
Chr2	stalkie_big_nohaplotig	exon	71953197	71953237	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 6810 6850 +
Chr2	stalkie_big_nohaplotig	exon	71953315	71953694	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 6430 6809 +
Chr2	stalkie_big_nohaplotig	exon	72005024	72005684	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 5769 6429 +
Chr2	stalkie_big_nohaplotig	exon	72008885	72008891	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 5762 5768 +
Chr2	stalkie_big_nohaplotig	exon	72009331	72009332	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 5760 5761 +
Chr2	stalkie_big_nohaplotig	exon	72016836	72016841	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 5754 5759 +
Chr2	stalkie_big_nohaplotig	exon	72019918	72019922	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 5749 5753 +
Chr2	stalkie_big_nohaplotig	exon	72022552	72022556	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 5744 5748 +
Chr2	stalkie_big_nohaplotig	exon	72039792	72039795	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 5739 5742 +
Chr2	stalkie_big_nohaplotig	exon	72053616	72053619	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 5735 5738 +
Chr2	stalkie_big_nohaplotig	exon	72064669	72064676	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 5727 5734 +
Chr2	stalkie_big_nohaplotig	exon	72064716	72064723	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 5686 5693 +
Chr2	stalkie_big_nohaplotig	exon	72065317	72065320	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 5682 5685 +
Chr2	stalkie_big_nohaplotig	exon	72073399	72073406	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 5674 5681 +
Chr2	stalkie_big_nohaplotig	exon	72079514	72079520	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 5667 5673 +
Chr2	stalkie_big_nohaplotig	exon	72080290	72080291	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 5665 5666 +
Chr2	stalkie_big_nohaplotig	exon	72098042	72098084	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 5272 5314 +
Chr2	stalkie_big_nohaplotig	exon	72113844	72113927	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 5188 5271 +
Chr2	stalkie_big_nohaplotig	exon	72129126	72129597	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 4716 5187 +
Chr2	stalkie_big_nohaplotig	exon	72134359	72134505	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 4569 4715 +
Chr2	stalkie_big_nohaplotig	exon	72138612	72138664	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 4516 4568 +
Chr2	stalkie_big_nohaplotig	exon	72159813	72159920	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 4408 4515 +
Chr2	stalkie_big_nohaplotig	exon	72171385	72171472	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 4320 4407 +
Chr2	stalkie_big_nohaplotig	exon	72171544	72171710	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 4153 4319 +
Chr2	stalkie_big_nohaplotig	exon	72176813	72176942	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 4023 4152 +
Chr2	stalkie_big_nohaplotig	exon	72203450	72203561	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 3911 4022 +
Chr2	stalkie_big_nohaplotig	exon	72222211	72222269	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 3852 3910 +
Chr2	stalkie_big_nohaplotig	exon	72222698	72223020	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 3529 3851 +
Chr2	stalkie_big_nohaplotig	exon	72223303	72223513	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 3318 3528 +
Chr2	stalkie_big_nohaplotig	exon	72243288	72243513	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 3092 3317 +
Chr2	stalkie_big_nohaplotig	exon	72243572	72244091	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 2572 3091 +
Chr2	stalkie_big_nohaplotig	exon	72244188	72244366	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 2393 2571 +
Chr2	stalkie_big_nohaplotig	exon	72294625	72294777	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 2240 2392 +
Chr2	stalkie_big_nohaplotig	exon	72294838	72294944	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 2133 2239 +
Chr2	stalkie_big_nohaplotig	exon	72313045	72313184	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1993 2132 +
Chr2	stalkie_big_nohaplotig	exon	72341695	72341800	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1887 1992 +
Chr2	stalkie_big_nohaplotig	exon	72341893	72342089	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1690 1886 +
Chr2	stalkie_big_nohaplotig	exon	72343122	72343130	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1640 1648 +
Chr2	stalkie_big_nohaplotig	exon	72343745	72343791	57	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1581 1639 +
Chr2	stalkie_big_nohaplotig	exon	72349141	72349142	50	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1579 1580 +
Chr2	stalkie_big_nohaplotig	exon	72361982	72362025	50	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1532 1578 +
Chr2	stalkie_big_nohaplotig	exon	72365280	72365290	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1454 1464 +
Chr2	stalkie_big_nohaplotig	exon	72371081	72371099	54	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1437 1453 +
Chr2	stalkie_big_nohaplotig	exon	72372993	72373003	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1399 1409 +
Chr2	stalkie_big_nohaplotig	exon	72374827	72374835	66	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1390 1398 +
Chr2	stalkie_big_nohaplotig	exon	72379072	72379122	49	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1341 1389 +
Chr2	stalkie_big_nohaplotig	exon	72381093	72381100	87	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1333 1340 +
Chr2	stalkie_big_nohaplotig	exon	72402935	72402943	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1281 1289 +
Chr2	stalkie_big_nohaplotig	exon	72420297	72420314	94	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1263 1280 +
Chr2	stalkie_big_nohaplotig	exon	72421754	72421790	61	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1228 1262 +
Chr2	stalkie_big_nohaplotig	exon	72422114	72422121	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1179 1186 +
Chr2	stalkie_big_nohaplotig	exon	72425112	72425123	38	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1147 1177 +
Chr2	stalkie_big_nohaplotig	exon	72433005	72433012	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1139 1146 +
Chr2	stalkie_big_nohaplotig	exon	72439969	72439980	83	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1127 1138 +
Chr2	stalkie_big_nohaplotig	exon	72440329	72440353	32	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1060 1126 +
Chr2	stalkie_big_nohaplotig	exon	72440791	72440800	90	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1043 1052 +
Chr2	stalkie_big_nohaplotig	exon	72456928	72456930	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1040 1042 +
Chr2	stalkie_big_nohaplotig	exon	72460562	72460571	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1030 1039 +
Chr2	stalkie_big_nohaplotig	exon	72466788	72466792	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1011 1015 +
Chr2	stalkie_big_nohaplotig	exon	72478352	72478357	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1005 1010 +
Chr2	stalkie_big_nohaplotig	exon	72493836	72493842	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 998 1004 +
Chr2	stalkie_big_nohaplotig	exon	72496912	72496916	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 993 997 +
Chr2	stalkie_big_nohaplotig	exon	72505848	72505854	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 986 992 +
Chr2	stalkie_big_nohaplotig	exon	72512300	72512302	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 983 985 +
Chr2	stalkie_big_nohaplotig	exon	72519452	72519455	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 979 982 +
Chr2	stalkie_big_nohaplotig	exon	72524102	72524122	76	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 961 978 +
Chr2	stalkie_big_nohaplotig	exon	72537650	72537657	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 953 960 +
Chr2	stalkie_big_nohaplotig	exon	72539549	72539553	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 948 952 +
Chr2	stalkie_big_nohaplotig	exon	72544149	72544151	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 945 947 +
Chr2	stalkie_big_nohaplotig	exon	72552600	72552611	83	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 933 944 +
Chr2	stalkie_big_nohaplotig	exon	72573341	72573372	58	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 890 932 +
Chr2	stalkie_big_nohaplotig	exon	72583027	72583049	73	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 867 889 +
Chr2	stalkie_big_nohaplotig	exon	72614073	72614082	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 819 828 +
Chr2	stalkie_big_nohaplotig	exon	72623827	72623828	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 817 818 +
Chr2	stalkie_big_nohaplotig	exon	72627164	72627169	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 811 816 +
Chr2	stalkie_big_nohaplotig	exon	72635360	72635364	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 806 810 +
Chr2	stalkie_big_nohaplotig	exon	72644973	72644981	100	-	.	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 797 805 +
Chr2	stalkie_big_nohaplotig	CDS	72343122	72343130	.	-	0	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1640 1648 +
Chr2	stalkie_big_nohaplotig	CDS	72343745	72343747	.	-	0	Parent=FBgn0001991.1.mrna1;Target=FBgn0001991.1 1637 1639 +
Chr2	stalkie_big_nohaplotig	mRNA	72009301	72013392	.	-	.	ID=comp163943_c1_seq1.mrna1;geneID=comp163943_c1_seq1.path1;Name=comp163943_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=3902;mismatches=52;indels=9;unknowns=0;Target=comp163943_c1_seq1 3419 3366 .;locus=RLOC_00018359
Chr2	stalkie_big_nohaplotig	exon	72009301	72010980	98	-	.	Parent=comp163943_c1_seq1.mrna1;Target=comp163943_c1_seq1 3959 2277 .
Chr2	stalkie_big_nohaplotig	exon	72011115	72013392	98	-	.	Parent=comp163943_c1_seq1.mrna1;Target=comp163943_c1_seq1 2276 1 .
Chr2	stalkie_big_nohaplotig	CDS	72009840	72009892	.	-	0	Parent=comp163943_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	72469958	72517404	.	+	.	ID=comp159964_c0_seq1.mrna1;geneID=comp159964_c0_seq1.path1;Name=comp159964_c0_seq1;Dir=indeterminatecoverage=37.4;identity=87.6;matches=503;mismatches=55;indels=16;unknowns=0;locus=RLOC_00018359
Chr2	stalkie_big_nohaplotig	exon	72469958	72469965	100	+	.	Parent=comp159964_c0_seq1.mrna1;Target=comp159964_c0_seq1 866 859 .
Chr2	stalkie_big_nohaplotig	exon	72469982	72469983	100	+	.	Parent=comp159964_c0_seq1.mrna1;Target=comp159964_c0_seq1 917 916 .
Chr2	stalkie_big_nohaplotig	exon	72471270	72471419	90	+	.	Parent=comp159964_c0_seq1.mrna1;Target=comp159964_c0_seq1 1067 918 .
Chr2	stalkie_big_nohaplotig	exon	72472789	72472820	93	+	.	Parent=comp159964_c0_seq1.mrna1;Target=comp159964_c0_seq1 1099 1068 .
Chr2	stalkie_big_nohaplotig	exon	72472879	72473186	83	+	.	Parent=comp159964_c0_seq1.mrna1;Target=comp159964_c0_seq1 1456 1137 .
Chr2	stalkie_big_nohaplotig	exon	72478065	72478076	100	+	.	Parent=comp159964_c0_seq1.mrna1;Target=comp159964_c0_seq1 1468 1457 .
Chr2	stalkie_big_nohaplotig	exon	72478089	72478097	100	+	.	Parent=comp159964_c0_seq1.mrna1;Target=comp159964_c0_seq1 1480 1472 .
Chr2	stalkie_big_nohaplotig	exon	72479302	72479305	100	+	.	Parent=comp159964_c0_seq1.mrna1;Target=comp159964_c0_seq1 1489 1486 .
Chr2	stalkie_big_nohaplotig	exon	72490278	72490283	100	+	.	Parent=comp159964_c0_seq1.mrna1;Target=comp159964_c0_seq1 1495 1490 .
Chr2	stalkie_big_nohaplotig	exon	72496936	72496939	100	+	.	Parent=comp159964_c0_seq1.mrna1;Target=comp159964_c0_seq1 1499 1496 .
Chr2	stalkie_big_nohaplotig	exon	72501027	72501030	100	+	.	Parent=comp159964_c0_seq1.mrna1;Target=comp159964_c0_seq1 1503 1500 .
Chr2	stalkie_big_nohaplotig	exon	72504687	72504690	100	+	.	Parent=comp159964_c0_seq1.mrna1;Target=comp159964_c0_seq1 1507 1504 .
Chr2	stalkie_big_nohaplotig	exon	72505055	72505057	100	+	.	Parent=comp159964_c0_seq1.mrna1;Target=comp159964_c0_seq1 1510 1508 .
Chr2	stalkie_big_nohaplotig	exon	72513548	72513549	100	+	.	Parent=comp159964_c0_seq1.mrna1;Target=comp159964_c0_seq1 1512 1511 .
Chr2	stalkie_big_nohaplotig	exon	72517393	72517404	100	+	.	Parent=comp159964_c0_seq1.mrna1;Target=comp159964_c0_seq1 1524 1513 .
Chr2	stalkie_big_nohaplotig	CDS	72471337	72471419	.	+	0	Parent=comp159964_c0_seq1.mrna1;Target=comp159964_c0_seq1 1067 985 .
Chr2	stalkie_big_nohaplotig	CDS	72472789	72472820	.	+	1	Parent=comp159964_c0_seq1.mrna1;Target=comp159964_c0_seq1 1099 1068 .
Chr2	stalkie_big_nohaplotig	mRNA	72478296	72478867	.	+	.	ID=comp116879_c0_seq1.mrna1;geneID=comp116879_c0_seq1.path1;Name=comp116879_c0_seq1;Dir=indeterminatecoverage=82.8;identity=99.0;matches=570;mismatches=2;indels=4;unknowns=0;Target=comp116879_c0_seq1 576 1 .;CDS_Target=comp116879_c0_seq1 555 385 .;locus=RLOC_00018359
Chr2	stalkie_big_nohaplotig	exon	72478296	72478867	98	+	.	Parent=comp116879_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	72478676	72478846	.	+	0	Parent=comp116879_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	72479238	72479679	.	-	.	ID=comp122950_c0_seq1.mrna1;geneID=comp122950_c0_seq1.path1;Name=comp122950_c0_seq1;Dir=indeterminatecoverage=96.5;identity=98.2;matches=434;mismatches=8;indels=0;unknowns=0;Target=comp122950_c0_seq1 457 16 .;CDS_Target=comp122950_c0_seq1 419 258 .;locus=RLOC_00018359
Chr2	stalkie_big_nohaplotig	exon	72479238	72479679	98	-	.	Parent=comp122950_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	72479276	72479437	.	-	0	Parent=comp122950_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	72491617	72494374	.	-	.	ID=FBgn0005642.1.mrna1;geneID=FBgn0005642.1.path1;Name=FBgn0005642.1;Dir=sensecoverage=100.0;identity=99.7;matches=2564;mismatches=1;indels=6;unknowns=0;locus=RLOC_00018359
Chr2	stalkie_big_nohaplotig	exon	72491617	72492137	100	-	.	Parent=FBgn0005642.1.mrna1;Target=FBgn0005642.1 2051 2571 +
Chr2	stalkie_big_nohaplotig	exon	72492209	72493116	100	-	.	Parent=FBgn0005642.1.mrna1;Target=FBgn0005642.1 1143 2050 +
Chr2	stalkie_big_nohaplotig	exon	72493177	72493341	100	-	.	Parent=FBgn0005642.1.mrna1;Target=FBgn0005642.1 978 1142 +
Chr2	stalkie_big_nohaplotig	exon	72493404	72494374	99	-	.	Parent=FBgn0005642.1.mrna1;Target=FBgn0005642.1 1 977 +
Chr2	stalkie_big_nohaplotig	CDS	72491617	72492137	.	-	2	Parent=FBgn0005642.1.mrna1;Target=FBgn0005642.1 2051 2571 +
Chr2	stalkie_big_nohaplotig	CDS	72492209	72493116	.	-	1	Parent=FBgn0005642.1.mrna1;Target=FBgn0005642.1 1143 2050 +
Chr2	stalkie_big_nohaplotig	CDS	72493177	72493341	.	-	1	Parent=FBgn0005642.1.mrna1;Target=FBgn0005642.1 978 1142 +
Chr2	stalkie_big_nohaplotig	CDS	72493404	72494374	.	-	0	Parent=FBgn0005642.1.mrna1;Target=FBgn0005642.1 1 977 +
Chr2	stalkie_big_nohaplotig	mRNA	72500658	72501789	.	-	.	ID=comp5191_c0_seq1.mrna1;geneID=comp5191_c0_seq1.path1;Name=comp5191_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=1132;mismatches=0;indels=0;unknowns=0;Target=comp5191_c0_seq1 1132 1 .;CDS_Target=comp5191_c0_seq1 441 205 .;locus=RLOC_00018359
Chr2	stalkie_big_nohaplotig	exon	72500658	72501789	100	-	.	Parent=comp5191_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	72501349	72501585	.	-	0	Parent=comp5191_c0_seq1.mrna1
Chr2	gffcl	locus	71944899	72150190	.	-	.	ID=RLOC_00018360;geneIDs=comp155207_c0_seq1.path1;transcripts=comp155207_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	71944899	72150190	.	-	.	ID=comp155207_c0_seq1.mrna1;geneID=comp155207_c0_seq1.path1;Name=comp155207_c0_seq1;Dir=indeterminatecoverage=93.0;identity=96.6;matches=4224;mismatches=74;indels=74;unknowns=0;Target=comp155207_c0_seq1 2287 1688 .;locus=RLOC_00018360
Chr2	stalkie_big_nohaplotig	exon	71944899	71944909	100	-	.	Parent=comp155207_c0_seq1.mrna1;Target=comp155207_c0_seq1 4378 4368 .
Chr2	stalkie_big_nohaplotig	exon	72073544	72073549	83	-	.	Parent=comp155207_c0_seq1.mrna1;Target=comp155207_c0_seq1 4367 4362 .
Chr2	stalkie_big_nohaplotig	exon	72081697	72081705	100	-	.	Parent=comp155207_c0_seq1.mrna1;Target=comp155207_c0_seq1 4361 4353 .
Chr2	stalkie_big_nohaplotig	exon	72082839	72082842	100	-	.	Parent=comp155207_c0_seq1.mrna1;Target=comp155207_c0_seq1 4352 4349 .
Chr2	stalkie_big_nohaplotig	exon	72087573	72087575	100	-	.	Parent=comp155207_c0_seq1.mrna1;Target=comp155207_c0_seq1 4348 4346 .
Chr2	stalkie_big_nohaplotig	exon	72090053	72090061	15	-	.	Parent=comp155207_c0_seq1.mrna1;Target=comp155207_c0_seq1 4339 4280 .
Chr2	stalkie_big_nohaplotig	exon	72100545	72100550	100	-	.	Parent=comp155207_c0_seq1.mrna1;Target=comp155207_c0_seq1 4279 4274 .
Chr2	stalkie_big_nohaplotig	exon	72115472	72115513	59	-	.	Parent=comp155207_c0_seq1.mrna1;Target=comp155207_c0_seq1 4273 4238 .
Chr2	stalkie_big_nohaplotig	exon	72119111	72119128	83	-	.	Parent=comp155207_c0_seq1.mrna1;Target=comp155207_c0_seq1 4237 4221 .
Chr2	stalkie_big_nohaplotig	exon	72123155	72123159	100	-	.	Parent=comp155207_c0_seq1.mrna1;Target=comp155207_c0_seq1 4220 4216 .
Chr2	stalkie_big_nohaplotig	exon	72145978	72146039	88	-	.	Parent=comp155207_c0_seq1.mrna1;Target=comp155207_c0_seq1 4215 4154 .
Chr2	stalkie_big_nohaplotig	exon	72146050	72150190	98	-	.	Parent=comp155207_c0_seq1.mrna1;Target=comp155207_c0_seq1 4153 21 .
Chr2	stalkie_big_nohaplotig	CDS	72147924	72148523	.	-	0	Parent=comp155207_c0_seq1.mrna1
Chr2	gffcl	locus	71982906	71983303	.	-	.	ID=RLOC_00018361;geneIDs=comp143626_c0_seq1.path1;transcripts=comp143626_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	71982906	71983303	.	-	.	ID=comp143626_c0_seq1.mrna1;geneID=comp143626_c0_seq1.path1;Name=comp143626_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.5;matches=393;mismatches=5;indels=1;unknowns=0;Target=comp143626_c0_seq1 399 1 .;CDS_Target=comp143626_c0_seq1 378 1 .;locus=RLOC_00018361
Chr2	stalkie_big_nohaplotig	exon	71982906	71983303	98	-	.	Parent=comp143626_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	71982927	71983303	.	-	0	Parent=comp143626_c0_seq1.mrna1
Chr2	gffcl	locus	72138977	72139952	.	+	.	ID=RLOC_00018363;geneIDs=comp141890_c0_seq1.path1;transcripts=comp141890_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	72138977	72139952	.	+	.	ID=comp141890_c0_seq1.mrna1;geneID=comp141890_c0_seq1.path1;Name=comp141890_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.8;matches=974;mismatches=2;indels=41;unknowns=0;Target=comp141890_c0_seq1 1017 1 .;CDS_Target=comp141890_c0_seq1 1004 816 .;locus=RLOC_00018363
Chr2	stalkie_big_nohaplotig	exon	72138977	72139952	95	+	.	Parent=comp141890_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	72139751	72139939	.	+	0	Parent=comp141890_c0_seq1.mrna1
Chr2	gffcl	locus	72142790	72143340	.	-	.	ID=RLOC_00018364;geneIDs=comp918710_c0_seq1.path1;transcripts=comp918710_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	72142790	72143340	.	-	.	ID=comp918710_c0_seq1.mrna1;geneID=comp918710_c0_seq1.path1;Name=comp918710_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=551;mismatches=0;indels=0;unknowns=0;Target=comp918710_c0_seq1 552 2 .;CDS_Target=comp918710_c0_seq1 411 343 .;locus=RLOC_00018364
Chr2	stalkie_big_nohaplotig	exon	72142790	72143340	100	-	.	Parent=comp918710_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	72142931	72142999	.	-	0	Parent=comp918710_c0_seq1.mrna1
Chr2	gffcl	locus	72166031	72166695	.	-	.	ID=RLOC_00018365;geneIDs=comp159851_c2_seq1.path1;transcripts=comp159851_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	72166031	72166695	.	-	.	ID=comp159851_c2_seq1.mrna1;geneID=comp159851_c2_seq1.path1;Name=comp159851_c2_seq1;Dir=indeterminatecoverage=83.4;identity=96.7;matches=643;mismatches=22;indels=0;unknowns=0;Target=comp159851_c2_seq1 735 71 .;CDS_Target=comp159851_c2_seq1 735 460 .;locus=RLOC_00018365
Chr2	stalkie_big_nohaplotig	exon	72166031	72166695	96	-	.	Parent=comp159851_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	72166031	72166306	.	-	0	Parent=comp159851_c2_seq1.mrna1
Chr2	gffcl	locus	72275007	73421269	.	+	.	ID=RLOC_00018368;geneIDs=comp160475_c2_seq1.path1;transcripts=comp160475_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	72275007	73421269	.	+	.	ID=comp160475_c2_seq1.mrna1;geneID=comp160475_c2_seq1.path1;Name=comp160475_c2_seq1;Dir=antisensecoverage=94.1;identity=96.4;matches=1201;mismatches=22;indels=23;unknowns=0;Target=comp160475_c2_seq1 171 656 .;locus=RLOC_00018368
Chr2	stalkie_big_nohaplotig	exon	72275007	72275025	84	+	.	Parent=comp160475_c2_seq1.mrna1;Target=comp160475_c2_seq1 1324 1341 -
Chr2	stalkie_big_nohaplotig	exon	72277166	72277172	100	+	.	Parent=comp160475_c2_seq1.mrna1;Target=comp160475_c2_seq1 1317 1323 -
Chr2	stalkie_big_nohaplotig	exon	72280297	72280304	100	+	.	Parent=comp160475_c2_seq1.mrna1;Target=comp160475_c2_seq1 1309 1316 -
Chr2	stalkie_big_nohaplotig	exon	72287885	72287892	100	+	.	Parent=comp160475_c2_seq1.mrna1;Target=comp160475_c2_seq1 1301 1308 -
Chr2	stalkie_big_nohaplotig	exon	72290593	72290601	100	+	.	Parent=comp160475_c2_seq1.mrna1;Target=comp160475_c2_seq1 1271 1279 -
Chr2	stalkie_big_nohaplotig	exon	72296982	72296983	100	+	.	Parent=comp160475_c2_seq1.mrna1;Target=comp160475_c2_seq1 1269 1270 -
Chr2	stalkie_big_nohaplotig	exon	72301670	72301671	100	+	.	Parent=comp160475_c2_seq1.mrna1;Target=comp160475_c2_seq1 1267 1268 -
Chr2	stalkie_big_nohaplotig	exon	72308734	72308742	77	+	.	Parent=comp160475_c2_seq1.mrna1;Target=comp160475_c2_seq1 1258 1266 -
Chr2	stalkie_big_nohaplotig	exon	72313305	72313312	100	+	.	Parent=comp160475_c2_seq1.mrna1;Target=comp160475_c2_seq1 1250 1257 -
Chr2	stalkie_big_nohaplotig	exon	72321044	72321051	100	+	.	Parent=comp160475_c2_seq1.mrna1;Target=comp160475_c2_seq1 1229 1236 -
Chr2	stalkie_big_nohaplotig	exon	72328651	72328659	100	+	.	Parent=comp160475_c2_seq1.mrna1;Target=comp160475_c2_seq1 1215 1223 -
Chr2	stalkie_big_nohaplotig	exon	72336739	72336755	82	+	.	Parent=comp160475_c2_seq1.mrna1;Target=comp160475_c2_seq1 1199 1214 -
Chr2	stalkie_big_nohaplotig	exon	72346783	72346784	100	+	.	Parent=comp160475_c2_seq1.mrna1;Target=comp160475_c2_seq1 1143 1144 -
Chr2	stalkie_big_nohaplotig	exon	72362251	72362259	100	+	.	Parent=comp160475_c2_seq1.mrna1;Target=comp160475_c2_seq1 1134 1142 -
Chr2	stalkie_big_nohaplotig	exon	72387299	72387310	75	+	.	Parent=comp160475_c2_seq1.mrna1;Target=comp160475_c2_seq1 1122 1133 -
Chr2	stalkie_big_nohaplotig	exon	72392329	72392333	100	+	.	Parent=comp160475_c2_seq1.mrna1;Target=comp160475_c2_seq1 1117 1121 -
Chr2	stalkie_big_nohaplotig	exon	72395351	72395357	100	+	.	Parent=comp160475_c2_seq1.mrna1;Target=comp160475_c2_seq1 1110 1116 -
Chr2	stalkie_big_nohaplotig	exon	72397648	72397656	100	+	.	Parent=comp160475_c2_seq1.mrna1;Target=comp160475_c2_seq1 1101 1109 -
Chr2	stalkie_big_nohaplotig	exon	72398776	72398788	100	+	.	Parent=comp160475_c2_seq1.mrna1;Target=comp160475_c2_seq1 1068 1080 -
Chr2	stalkie_big_nohaplotig	exon	72404735	72404759	51	+	.	Parent=comp160475_c2_seq1.mrna1;Target=comp160475_c2_seq1 1038 1067 -
Chr2	stalkie_big_nohaplotig	exon	72412693	72412695	100	+	.	Parent=comp160475_c2_seq1.mrna1;Target=comp160475_c2_seq1 1035 1037 -
Chr2	stalkie_big_nohaplotig	exon	73420230	73421269	98	+	.	Parent=comp160475_c2_seq1.mrna1;Target=comp160475_c2_seq1 1 1034 -
Chr2	stalkie_big_nohaplotig	CDS	73420614	73421099	.	+	0	Parent=comp160475_c2_seq1.mrna1
Chr2	gffcl	locus	72379721	72380630	.	+	.	ID=RLOC_00018369;geneIDs=comp150114_c0_seq1.path1;transcripts=comp150114_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	72379721	72380630	.	+	.	ID=comp150114_c0_seq1.mrna1;geneID=comp150114_c0_seq1.path1;Name=comp150114_c0_seq1;Dir=sensecoverage=100.0;identity=91.1;matches=682;mismatches=35;indels=32;unknowns=0;Target=comp150114_c0_seq1 356 400 +;locus=RLOC_00018369
Chr2	stalkie_big_nohaplotig	exon	72379721	72380239	92	+	.	Parent=comp150114_c0_seq1.mrna1;Target=comp150114_c0_seq1 1 502 +
Chr2	stalkie_big_nohaplotig	exon	72380412	72380630	88	+	.	Parent=comp150114_c0_seq1.mrna1;Target=comp150114_c0_seq1 503 728 +
Chr2	stalkie_big_nohaplotig	CDS	72380089	72380137	.	+	0	Parent=comp150114_c0_seq1.mrna1
Chr2	gffcl	locus	72453909	72454871	.	+	.	ID=RLOC_00018370;geneIDs=comp154393_c0_seq1.path1;transcripts=comp154393_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	72453909	72454871	.	+	.	ID=comp154393_c0_seq1.mrna1;geneID=comp154393_c0_seq1.path1;Name=comp154393_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=963;mismatches=0;indels=0;unknowns=0;Target=comp154393_c0_seq1 963 1 .;CDS_Target=comp154393_c0_seq1 781 665 .;locus=RLOC_00018370
Chr2	stalkie_big_nohaplotig	exon	72453909	72454871	100	+	.	Parent=comp154393_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	72454573	72454689	.	+	0	Parent=comp154393_c0_seq1.mrna1
Chr2	gffcl	locus	72455041	72455397	.	-	.	ID=RLOC_00018371;geneIDs=comp81339_c0_seq1.path1;transcripts=comp81339_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	72455041	72455397	.	-	.	ID=comp81339_c0_seq1.mrna1;geneID=comp81339_c0_seq1.path1;Name=comp81339_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=356;mismatches=1;indels=0;unknowns=0;Target=comp81339_c0_seq1 357 1 .;CDS_Target=comp81339_c0_seq1 81 1 .;locus=RLOC_00018371
Chr2	stalkie_big_nohaplotig	exon	72455041	72455397	99	-	.	Parent=comp81339_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	72455317	72455397	.	-	0	Parent=comp81339_c0_seq1.mrna1
Chr2	gffcl	locus	72475985	72476525	.	-	.	ID=RLOC_00018372;geneIDs=comp151534_c1_seq1.path1;transcripts=comp151534_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	72475985	72476525	.	-	.	ID=comp151534_c1_seq1.mrna1;geneID=comp151534_c1_seq1.path1;Name=comp151534_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.0;matches=525;mismatches=16;indels=0;unknowns=0;Target=comp151534_c1_seq1 541 1 .;CDS_Target=comp151534_c1_seq1 187 86 .;locus=RLOC_00018372
Chr2	stalkie_big_nohaplotig	exon	72475985	72476525	97	-	.	Parent=comp151534_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	72476339	72476440	.	-	0	Parent=comp151534_c1_seq1.mrna1
Chr2	gffcl	locus	72479757	72480084	.	+	.	ID=RLOC_00018374;geneIDs=comp140191_c0_seq1.path1;transcripts=comp140191_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	72479757	72480084	.	+	.	ID=comp140191_c0_seq1.mrna1;geneID=comp140191_c0_seq1.path1;Name=comp140191_c0_seq1;Dir=indeterminatecoverage=92.1;identity=99.1;matches=325;mismatches=3;indels=0;unknowns=0;Target=comp140191_c0_seq1 346 19 .;CDS_Target=comp140191_c0_seq1 142 20 .;locus=RLOC_00018374
Chr2	stalkie_big_nohaplotig	exon	72479757	72480084	99	+	.	Parent=comp140191_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	72479758	72479880	.	+	0	Parent=comp140191_c0_seq1.mrna1
Chr2	gffcl	locus	72497016	72498757	.	.	.	ID=RLOC_00018375;geneIDs=FBgn0039686.1.path2,comp67088_c0_seq1.path1;transcripts=FBgn0039686.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	72497016	72498089	.	-	.	ID=FBgn0039686.1.mrna2;geneID=FBgn0039686.1.path2;Name=FBgn0039686.1;Dir=sensecoverage=94.0;identity=99.6;matches=890;mismatches=4;indels=0;unknowns=0;locus=RLOC_00018375
Chr2	stalkie_big_nohaplotig	exon	72497016	72497669	99	-	.	Parent=FBgn0039686.1.mrna2;Target=FBgn0039686.1 298 951 +
Chr2	stalkie_big_nohaplotig	exon	72497850	72498089	99	-	.	Parent=FBgn0039686.1.mrna2;Target=FBgn0039686.1 58 297 +
Chr2	stalkie_big_nohaplotig	CDS	72497016	72497669	.	-	0	Parent=FBgn0039686.1.mrna2;Target=FBgn0039686.1 298 951 +
Chr2	stalkie_big_nohaplotig	CDS	72497850	72498089	.	-	0	Parent=FBgn0039686.1.mrna2;Target=FBgn0039686.1 58 297 +
Chr2	gffcl	locus	72519275	72520121	.	+	.	ID=RLOC_00018376;geneIDs=FBgn0010078.2.path2;transcripts=FBgn0010078.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	72519275	72520121	.	+	.	ID=FBgn0010078.2.mrna2;geneID=FBgn0010078.2.path2;Name=FBgn0010078.2;Dir=sensecoverage=100.0;identity=99.8;matches=482;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018376
Chr2	stalkie_big_nohaplotig	exon	72519275	72519350	100	+	.	Parent=FBgn0010078.2.mrna2;Target=FBgn0010078.2 1 76 +
Chr2	stalkie_big_nohaplotig	exon	72519473	72519556	100	+	.	Parent=FBgn0010078.2.mrna2;Target=FBgn0010078.2 77 160 +
Chr2	stalkie_big_nohaplotig	exon	72519610	72519737	99	+	.	Parent=FBgn0010078.2.mrna2;Target=FBgn0010078.2 161 288 +
Chr2	stalkie_big_nohaplotig	exon	72519927	72520121	100	+	.	Parent=FBgn0010078.2.mrna2;Target=FBgn0010078.2 289 483 +
Chr2	stalkie_big_nohaplotig	CDS	72519275	72519350	.	+	0	Parent=FBgn0010078.2.mrna2;Target=FBgn0010078.2 1 76 +
Chr2	stalkie_big_nohaplotig	CDS	72519473	72519556	.	+	2	Parent=FBgn0010078.2.mrna2;Target=FBgn0010078.2 77 160 +
Chr2	stalkie_big_nohaplotig	CDS	72519610	72519737	.	+	2	Parent=FBgn0010078.2.mrna2;Target=FBgn0010078.2 161 288 +
Chr2	stalkie_big_nohaplotig	CDS	72519927	72520121	.	+	0	Parent=FBgn0010078.2.mrna2;Target=FBgn0010078.2 289 483 +
Chr2	gffcl	locus	72520129	72520554	.	-	.	ID=RLOC_00018377;geneIDs=comp135924_c0_seq1.path2;transcripts=comp135924_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	72520129	72520554	.	-	.	ID=comp135924_c0_seq1.mrna2;geneID=comp135924_c0_seq1.path2;Name=comp135924_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=425;mismatches=1;indels=0;unknowns=0;Target=comp135924_c0_seq1 426 1 .;CDS_Target=comp135924_c0_seq1 96 1 .;locus=RLOC_00018377
Chr2	stalkie_big_nohaplotig	exon	72520129	72520554	99	-	.	Parent=comp135924_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	72520459	72520554	.	-	0	Parent=comp135924_c0_seq1.mrna2
Chr2	gffcl	locus	72520680	72521489	.	-	.	ID=RLOC_00018378;geneIDs=FBgn0261881.1.path2;transcripts=FBgn0261881.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	72520680	72521489	.	-	.	ID=FBgn0261881.1.mrna2;geneID=FBgn0261881.1.path2;Name=FBgn0261881.1;Dir=sensecoverage=100.0;identity=99.9;matches=704;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018378
Chr2	stalkie_big_nohaplotig	exon	72520680	72521061	100	-	.	Parent=FBgn0261881.1.mrna2;Target=FBgn0261881.1 324 705 +
Chr2	stalkie_big_nohaplotig	exon	72521110	72521236	99	-	.	Parent=FBgn0261881.1.mrna2;Target=FBgn0261881.1 197 323 +
Chr2	stalkie_big_nohaplotig	exon	72521294	72521489	100	-	.	Parent=FBgn0261881.1.mrna2;Target=FBgn0261881.1 1 196 +
Chr2	stalkie_big_nohaplotig	CDS	72520680	72521061	.	-	1	Parent=FBgn0261881.1.mrna2;Target=FBgn0261881.1 324 705 +
Chr2	stalkie_big_nohaplotig	CDS	72521110	72521236	.	-	2	Parent=FBgn0261881.1.mrna2;Target=FBgn0261881.1 197 323 +
Chr2	stalkie_big_nohaplotig	CDS	72521294	72521489	.	-	0	Parent=FBgn0261881.1.mrna2;Target=FBgn0261881.1 1 196 +
Chr2	gffcl	locus	72540778	72541719	.	+	.	ID=RLOC_00018379;geneIDs=Dp_FBgn0249247.10.path2;transcripts=Dp_FBgn0249247.10.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	72540778	72541719	.	+	.	ID=Dp_FBgn0249247.10.mrna2;geneID=Dp_FBgn0249247.10.path2;Name=Dp_FBgn0249247.10;Dir=indeterminatecoverage=100.0;identity=98.8;matches=931;mismatches=11;indels=0;unknowns=0;Target=Dp_FBgn0249247.10 942 1 .;locus=RLOC_00018379
Chr2	stalkie_big_nohaplotig	exon	72540778	72541719	98	+	.	Parent=Dp_FBgn0249247.10.mrna2
Chr2	stalkie_big_nohaplotig	CDS	72540778	72541719	.	+	0	Parent=Dp_FBgn0249247.10.mrna2
Chr2	gffcl	locus	72738447	72739439	.	+	.	ID=RLOC_00018382;geneIDs=comp163951_c1_seq1.path2;transcripts=comp163951_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	72738447	72739439	.	+	.	ID=comp163951_c1_seq1.mrna2;geneID=comp163951_c1_seq1.path2;Name=comp163951_c1_seq1;Dir=indeterminatecoverage=63.1;identity=95.8;matches=958;mismatches=34;indels=8;unknowns=0;Target=comp163951_c1_seq1 1104 106 .;CDS_Target=comp163951_c1_seq1 305 174 .;locus=RLOC_00018382
Chr2	stalkie_big_nohaplotig	exon	72738447	72739439	95	+	.	Parent=comp163951_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	72738515	72738646	.	+	0	Parent=comp163951_c1_seq1.mrna2
Chr2	gffcl	locus	72741119	73308779	.	+	.	ID=RLOC_00018383;geneIDs=comp163905_c1_seq1.path1;transcripts=comp163905_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	72741119	73308779	.	+	.	ID=comp163905_c1_seq1.mrna1;geneID=comp163905_c1_seq1.path1;Name=comp163905_c1_seq1;Dir=indeterminatecoverage=87.1;identity=92.7;matches=3194;mismatches=200;indels=52;unknowns=0;Target=comp163905_c1_seq1 3146 3132 .;locus=RLOC_00018383
Chr2	stalkie_big_nohaplotig	exon	72741119	72743477	92	+	.	Parent=comp163905_c1_seq1.mrna1;Target=comp163905_c1_seq1 2939 562 .
Chr2	stalkie_big_nohaplotig	exon	72747850	72747855	50	+	.	Parent=comp163905_c1_seq1.mrna1;Target=comp163905_c1_seq1 2971 2967 .
Chr2	stalkie_big_nohaplotig	exon	72748394	72748452	96	+	.	Parent=comp163905_c1_seq1.mrna1;Target=comp163905_c1_seq1 3030 2972 .
Chr2	stalkie_big_nohaplotig	exon	72915633	72915685	57	+	.	Parent=comp163905_c1_seq1.mrna1;Target=comp163905_c1_seq1 3174 3122 .
Chr2	stalkie_big_nohaplotig	exon	73180546	73180601	89	+	.	Parent=comp163905_c1_seq1.mrna1;Target=comp163905_c1_seq1 3230 3175 .
Chr2	stalkie_big_nohaplotig	exon	73180604	73180686	86	+	.	Parent=comp163905_c1_seq1.mrna1;Target=comp163905_c1_seq1 3418 3339 .
Chr2	stalkie_big_nohaplotig	exon	73307972	73308380	98	+	.	Parent=comp163905_c1_seq1.mrna1;Target=comp163905_c1_seq1 3827 3419 .
Chr2	stalkie_big_nohaplotig	exon	73308393	73308779	94	+	.	Parent=comp163905_c1_seq1.mrna1;Target=comp163905_c1_seq1 4345 3958 .
Chr2	stalkie_big_nohaplotig	CDS	72915647	72915659	.	+	0	Parent=comp163905_c1_seq1.mrna1
Chr2	gffcl	locus	72936210	72936626	.	-	.	ID=RLOC_00018384;geneIDs=comp810432_c0_seq1.path2;transcripts=comp810432_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	72936210	72936626	.	-	.	ID=comp810432_c0_seq1.mrna2;geneID=comp810432_c0_seq1.path2;Name=comp810432_c0_seq1;Dir=indeterminatecoverage=82.1;identity=100.0;matches=417;mismatches=0;indels=0;unknowns=0;Target=comp810432_c0_seq1 496 80 .;CDS_Target=comp810432_c0_seq1 471 367 .;locus=RLOC_00018384
Chr2	stalkie_big_nohaplotig	exon	72936210	72936626	100	-	.	Parent=comp810432_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	72936235	72936339	.	-	0	Parent=comp810432_c0_seq1.mrna2
Chr2	gffcl	locus	73155205	73156337	.	-	.	ID=RLOC_00018386;geneIDs=comp163325_c0_seq1.path8;transcripts=comp163325_c0_seq1.mrna8
Chr2	stalkie_big_nohaplotig	mRNA	73155205	73156337	.	-	.	ID=comp163325_c0_seq1.mrna8;geneID=comp163325_c0_seq1.path8;Name=comp163325_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1130;mismatches=3;indels=0;unknowns=0;Target=comp163325_c0_seq1 1133 1 .;CDS_Target=comp163325_c0_seq1 255 1 .;locus=RLOC_00018386
Chr2	stalkie_big_nohaplotig	exon	73155205	73156337	99	-	.	Parent=comp163325_c0_seq1.mrna8
Chr2	stalkie_big_nohaplotig	CDS	73156083	73156337	.	-	0	Parent=comp163325_c0_seq1.mrna8
Chr2	gffcl	locus	73216204	73217665	.	-	.	ID=RLOC_00018388;geneIDs=ORF749.path5;transcripts=ORF749.mrna5
Chr2	stalkie_big_nohaplotig	mRNA	73216204	73217665	.	-	.	ID=ORF749.mrna5;geneID=ORF749.path5;Name=ORF749;Dir=indeterminatecoverage=99.8;identity=99.5;matches=1455;mismatches=6;indels=1;unknowns=0;Target=ORF749 1464 4 .;CDS_Target=ORF749 28 5 .;locus=RLOC_00018388
Chr2	stalkie_big_nohaplotig	exon	73216204	73217665	99	-	.	Parent=ORF749.mrna5
Chr2	stalkie_big_nohaplotig	CDS	73217640	73217664	.	-	0	Parent=ORF749.mrna5
Chr2	gffcl	locus	73247214	73247424	.	+	.	ID=RLOC_00018389;geneIDs=comp150287_c0_seq1.path4;transcripts=comp150287_c0_seq1.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	73247214	73247424	.	+	.	ID=comp150287_c0_seq1.mrna4;geneID=comp150287_c0_seq1.path4;Name=comp150287_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=207;mismatches=4;indels=0;unknowns=0;Target=comp150287_c0_seq1 211 1 .;CDS_Target=comp150287_c0_seq1 211 2 .;locus=RLOC_00018389
Chr2	stalkie_big_nohaplotig	exon	73247214	73247424	98	+	.	Parent=comp150287_c0_seq1.mrna4
Chr2	stalkie_big_nohaplotig	CDS	73247215	73247424	.	+	0	Parent=comp150287_c0_seq1.mrna4
Chr2	gffcl	locus	73283253	73284895	.	+	.	ID=RLOC_00018390;geneIDs=FBgn0025739.1.path2;transcripts=FBgn0025739.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	73283253	73284895	.	+	.	ID=FBgn0025739.1.mrna2;geneID=FBgn0025739.1.path2;Name=FBgn0025739.1;Dir=sensecoverage=100.0;identity=99.9;matches=1588;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018390
Chr2	stalkie_big_nohaplotig	exon	73283253	73283645	99	+	.	Parent=FBgn0025739.1.mrna2;Target=FBgn0025739.1 1 393 +
Chr2	stalkie_big_nohaplotig	exon	73283699	73284895	99	+	.	Parent=FBgn0025739.1.mrna2;Target=FBgn0025739.1 394 1590 +
Chr2	stalkie_big_nohaplotig	CDS	73283253	73283645	.	+	0	Parent=FBgn0025739.1.mrna2;Target=FBgn0025739.1 1 393 +
Chr2	stalkie_big_nohaplotig	CDS	73283699	73284895	.	+	0	Parent=FBgn0025739.1.mrna2;Target=FBgn0025739.1 394 1590 +
Chr2	gffcl	locus	73293927	73795336	.	+	.	ID=RLOC_00018391;geneIDs=comp153183_c1_seq1.path2;transcripts=comp153183_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	73293927	73795336	.	+	.	ID=comp153183_c1_seq1.mrna2;geneID=comp153183_c1_seq1.path2;Name=comp153183_c1_seq1;Dir=indeterminatecoverage=95.7;identity=96.8;matches=1321;mismatches=21;indels=23;unknowns=0;Target=comp153183_c1_seq1 1145 3 .;locus=RLOC_00018391
Chr2	stalkie_big_nohaplotig	exon	73293927	73295149	99	+	.	Parent=comp153183_c1_seq1.mrna2;Target=comp153183_c1_seq1 1222 1 .
Chr2	stalkie_big_nohaplotig	exon	73754835	73754840	100	+	.	Parent=comp153183_c1_seq1.mrna2;Target=comp153183_c1_seq1 1228 1223 .
Chr2	stalkie_big_nohaplotig	exon	73756612	73756613	100	+	.	Parent=comp153183_c1_seq1.mrna2;Target=comp153183_c1_seq1 1230 1229 .
Chr2	stalkie_big_nohaplotig	exon	73760866	73760873	42	+	.	Parent=comp153183_c1_seq1.mrna2;Target=comp153183_c1_seq1 1249 1231 .
Chr2	stalkie_big_nohaplotig	exon	73760932	73760950	78	+	.	Parent=comp153183_c1_seq1.mrna2;Target=comp153183_c1_seq1 1268 1250 .
Chr2	stalkie_big_nohaplotig	exon	73764480	73764487	100	+	.	Parent=comp153183_c1_seq1.mrna2;Target=comp153183_c1_seq1 1276 1269 .
Chr2	stalkie_big_nohaplotig	exon	73765827	73765843	73	+	.	Parent=comp153183_c1_seq1.mrna2;Target=comp153183_c1_seq1 1299 1281 .
Chr2	stalkie_big_nohaplotig	exon	73768879	73768903	58	+	.	Parent=comp153183_c1_seq1.mrna2;Target=comp153183_c1_seq1 1333 1300 .
Chr2	stalkie_big_nohaplotig	exon	73781506	73781515	100	+	.	Parent=comp153183_c1_seq1.mrna2;Target=comp153183_c1_seq1 1343 1334 .
Chr2	stalkie_big_nohaplotig	exon	73788912	73788921	100	+	.	Parent=comp153183_c1_seq1.mrna2;Target=comp153183_c1_seq1 1353 1344 .
Chr2	stalkie_big_nohaplotig	exon	73791560	73791561	100	+	.	Parent=comp153183_c1_seq1.mrna2;Target=comp153183_c1_seq1 1355 1354 .
Chr2	stalkie_big_nohaplotig	exon	73793147	73793152	100	+	.	Parent=comp153183_c1_seq1.mrna2;Target=comp153183_c1_seq1 1361 1356 .
Chr2	stalkie_big_nohaplotig	exon	73795330	73795336	100	+	.	Parent=comp153183_c1_seq1.mrna2;Target=comp153183_c1_seq1 1368 1362 .
Chr2	stalkie_big_nohaplotig	CDS	73293929	73295071	.	+	0	Parent=comp153183_c1_seq1.mrna2
Chr2	gffcl	locus	73300388	73300942	.	+	.	ID=RLOC_00018392;geneIDs=comp160431_c0_seq1.path8;transcripts=comp160431_c0_seq1.mrna8
Chr2	stalkie_big_nohaplotig	mRNA	73300388	73300942	.	+	.	ID=comp160431_c0_seq1.mrna8;geneID=comp160431_c0_seq1.path8;Name=comp160431_c0_seq1;Dir=indeterminatecoverage=91.8;identity=98.4;matches=549;mismatches=6;indels=3;unknowns=0;Target=comp160431_c0_seq1 558 1 .;CDS_Target=comp160431_c0_seq1 528 1 .;locus=RLOC_00018392
Chr2	stalkie_big_nohaplotig	exon	73300388	73300942	98	+	.	Parent=comp160431_c0_seq1.mrna8
Chr2	stalkie_big_nohaplotig	CDS	73300388	73300915	.	+	0	Parent=comp160431_c0_seq1.mrna8
Chr2	gffcl	locus	73343346	73344340	.	+	.	ID=RLOC_00018393;geneIDs=FBgn0038552.1.path1;transcripts=FBgn0038552.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	73343346	73344340	.	+	.	ID=FBgn0038552.1.mrna1;geneID=FBgn0038552.1.path1;Name=FBgn0038552.1;Dir=sensecoverage=63.3;identity=100.0;matches=871;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018393
Chr2	stalkie_big_nohaplotig	exon	73343346	73343935	100	+	.	Parent=FBgn0038552.1.mrna1;Target=FBgn0038552.1 1 590 +
Chr2	stalkie_big_nohaplotig	exon	73344060	73344340	100	+	.	Parent=FBgn0038552.1.mrna1;Target=FBgn0038552.1 591 871 +
Chr2	stalkie_big_nohaplotig	CDS	73343346	73343935	.	+	0	Parent=FBgn0038552.1.mrna1;Target=FBgn0038552.1 1 590 +
Chr2	stalkie_big_nohaplotig	CDS	73344060	73344340	.	+	1	Parent=FBgn0038552.1.mrna1;Target=FBgn0038552.1 591 871 +
Chr2	gffcl	locus	73368684	73368767	.	+	.	ID=RLOC_00018394;geneIDs=comp160475_c2_seq1.path2;transcripts=comp160475_c2_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	73368684	73368767	.	+	.	ID=comp160475_c2_seq1.mrna2;geneID=comp160475_c2_seq1.path2;Name=comp160475_c2_seq1;Dir=indeterminatecoverage=5.9;identity=97.6;matches=82;mismatches=2;indels=0;unknowns=0;Target=comp160475_c2_seq1 1425 1342 .;locus=RLOC_00018394
Chr2	stalkie_big_nohaplotig	exon	73368684	73368767	97	+	.	Parent=comp160475_c2_seq1.mrna2
Chr2	gffcl	locus	73468350	73468907	.	-	.	ID=RLOC_00018397;geneIDs=FBgn0038552.1.path2;transcripts=FBgn0038552.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	73468350	73468907	.	-	.	ID=FBgn0038552.1.mrna2;geneID=FBgn0038552.1.path2;Name=FBgn0038552.1;Dir=sensecoverage=36.7;identity=100.0;matches=506;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018397
Chr2	stalkie_big_nohaplotig	exon	73468350	73468566	100	-	.	Parent=FBgn0038552.1.mrna2;Target=FBgn0038552.1 1161 1377 +
Chr2	stalkie_big_nohaplotig	exon	73468619	73468907	100	-	.	Parent=FBgn0038552.1.mrna2;Target=FBgn0038552.1 872 1160 +
Chr2	stalkie_big_nohaplotig	CDS	73468350	73468566	.	-	0	Parent=FBgn0038552.1.mrna2;Target=FBgn0038552.1 1161 1377 +
Chr2	stalkie_big_nohaplotig	CDS	73468619	73468907	.	-	1	Parent=FBgn0038552.1.mrna2;Target=FBgn0038552.1 872 1160 +
Chr2	gffcl	locus	73469351	73469656	.	+	.	ID=RLOC_00018398;geneIDs=comp135826_c0_seq1.path1;transcripts=comp135826_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	73469351	73469656	.	+	.	ID=comp135826_c0_seq1.mrna1;geneID=comp135826_c0_seq1.path1;Name=comp135826_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=306;mismatches=0;indels=0;unknowns=0;Target=comp135826_c0_seq1 306 1 .;CDS_Target=comp135826_c0_seq1 236 48 .;locus=RLOC_00018398
Chr2	stalkie_big_nohaplotig	exon	73469351	73469656	100	+	.	Parent=comp135826_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	73469398	73469586	.	+	0	Parent=comp135826_c0_seq1.mrna1
Chr2	gffcl	locus	73470402	73472237	.	.	.	ID=RLOC_00018399;geneIDs=Dp_FBgn0243606.path1,Dp_FBgn0249326.path1,comp161474_c0_seq1.path1;transcripts=comp161474_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	73470402	73472237	.	+	.	ID=comp161474_c0_seq1.mrna1;geneID=comp161474_c0_seq1.path1;Name=comp161474_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1834;mismatches=2;indels=7;unknowns=0;Target=comp161474_c0_seq1 1843 1 .;CDS_Target=comp161474_c0_seq1 653 501 .;locus=RLOC_00018399
Chr2	stalkie_big_nohaplotig	exon	73470402	73472237	99	+	.	Parent=comp161474_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	73470902	73471047	.	+	0	Parent=comp161474_c0_seq1.mrna1
Chr2	gffcl	locus	73474764	73475630	.	-	.	ID=RLOC_00018400;geneIDs=comp117718_c0_seq1.path1;transcripts=comp117718_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	73474764	73475630	.	-	.	ID=comp117718_c0_seq1.mrna1;geneID=comp117718_c0_seq1.path1;Name=comp117718_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=866;mismatches=1;indels=0;unknowns=0;Target=comp117718_c0_seq1 867 1 .;CDS_Target=comp117718_c0_seq1 323 177 .;locus=RLOC_00018400
Chr2	stalkie_big_nohaplotig	exon	73474764	73475630	99	-	.	Parent=comp117718_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	73475308	73475454	.	-	0	Parent=comp117718_c0_seq1.mrna1
Chr2	gffcl	locus	73542846	73548795	.	-	.	ID=RLOC_00018401;geneIDs=comp163377_c0_seq1.path1;transcripts=comp163377_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	73542846	73548795	.	-	.	ID=comp163377_c0_seq1.mrna1;geneID=comp163377_c0_seq1.path1;Name=comp163377_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.3;matches=3108;mismatches=128;indels=26;unknowns=0;Target=comp163377_c0_seq1 2285 1446 .;locus=RLOC_00018401
Chr2	stalkie_big_nohaplotig	exon	73542846	73543365	95	-	.	Parent=comp163377_c0_seq1.mrna1;Target=comp163377_c0_seq1 3237 2718 .
Chr2	stalkie_big_nohaplotig	exon	73545405	73546721	96	-	.	Parent=comp163377_c0_seq1.mrna1;Target=comp163377_c0_seq1 2717 1400 .
Chr2	stalkie_big_nohaplotig	exon	73547372	73548795	93	-	.	Parent=comp163377_c0_seq1.mrna1;Target=comp163377_c0_seq1 1399 1 .
Chr2	stalkie_big_nohaplotig	CDS	73545837	73546675	.	-	0	Parent=comp163377_c0_seq1.mrna1
Chr2	gffcl	locus	73594459	73596506	.	.	.	ID=RLOC_00018402;geneIDs=FBgn0023423.1.path1,comp93764_c0_seq1.path1;transcripts=FBgn0023423.1.mrna1,comp93764_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	73594459	73596506	.	+	.	ID=FBgn0023423.1.mrna1;geneID=FBgn0023423.1.path1;Name=FBgn0023423.1;Dir=sensecoverage=94.4;identity=100.0;matches=1459;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018402
Chr2	stalkie_big_nohaplotig	exon	73594459	73594681	100	+	.	Parent=FBgn0023423.1.mrna1;Target=FBgn0023423.1 70 292 +
Chr2	stalkie_big_nohaplotig	exon	73594785	73595056	100	+	.	Parent=FBgn0023423.1.mrna1;Target=FBgn0023423.1 293 564 +
Chr2	stalkie_big_nohaplotig	exon	73595137	73595316	100	+	.	Parent=FBgn0023423.1.mrna1;Target=FBgn0023423.1 565 744 +
Chr2	stalkie_big_nohaplotig	exon	73595417	73595871	100	+	.	Parent=FBgn0023423.1.mrna1;Target=FBgn0023423.1 745 1199 +
Chr2	stalkie_big_nohaplotig	exon	73595923	73596112	100	+	.	Parent=FBgn0023423.1.mrna1;Target=FBgn0023423.1 1200 1389 +
Chr2	stalkie_big_nohaplotig	exon	73596220	73596222	100	+	.	Parent=FBgn0023423.1.mrna1;Target=FBgn0023423.1 1390 1392 +
Chr2	stalkie_big_nohaplotig	exon	73596371	73596506	100	+	.	Parent=FBgn0023423.1.mrna1;Target=FBgn0023423.1 1393 1528 +
Chr2	stalkie_big_nohaplotig	CDS	73594459	73594681	.	+	0	Parent=FBgn0023423.1.mrna1;Target=FBgn0023423.1 70 292 +
Chr2	stalkie_big_nohaplotig	CDS	73594785	73595056	.	+	2	Parent=FBgn0023423.1.mrna1;Target=FBgn0023423.1 293 564 +
Chr2	stalkie_big_nohaplotig	CDS	73595137	73595316	.	+	0	Parent=FBgn0023423.1.mrna1;Target=FBgn0023423.1 565 744 +
Chr2	stalkie_big_nohaplotig	CDS	73595417	73595871	.	+	0	Parent=FBgn0023423.1.mrna1;Target=FBgn0023423.1 745 1199 +
Chr2	stalkie_big_nohaplotig	CDS	73595923	73596112	.	+	1	Parent=FBgn0023423.1.mrna1;Target=FBgn0023423.1 1200 1389 +
Chr2	stalkie_big_nohaplotig	CDS	73596220	73596222	.	+	0	Parent=FBgn0023423.1.mrna1;Target=FBgn0023423.1 1390 1392 +
Chr2	stalkie_big_nohaplotig	CDS	73596371	73596505	.	+	0	Parent=FBgn0023423.1.mrna1;Target=FBgn0023423.1 1393 1527 +
Chr2	stalkie_big_nohaplotig	mRNA	73596091	73596418	.	-	.	ID=comp93764_c0_seq1.mrna1;geneID=comp93764_c0_seq1.path1;Name=comp93764_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=327;mismatches=1;indels=0;unknowns=0;Target=comp93764_c0_seq1 328 1 .;CDS_Target=comp93764_c0_seq1 108 1 .;locus=RLOC_00018402
Chr2	stalkie_big_nohaplotig	exon	73596091	73596418	99	-	.	Parent=comp93764_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	73596311	73596418	.	-	0	Parent=comp93764_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	73602448	74056336	.	+	.	ID=comp162690_c2_seq1.mrna1;geneID=comp162690_c2_seq1.path1;Name=comp162690_c2_seq1;Dir=indeterminatecoverage=83.7;identity=95.3;matches=966;mismatches=32;indels=16;unknowns=0;Target=comp162690_c2_seq1 994 988 .;locus=RLOC_00018404
Chr2	stalkie_big_nohaplotig	exon	73602448	73603163	96	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 821 102 .
Chr2	stalkie_big_nohaplotig	exon	73607070	73607133	61	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 877 822 .
Chr2	stalkie_big_nohaplotig	exon	73607289	73607299	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 888 878 .
Chr2	stalkie_big_nohaplotig	exon	73613029	73613037	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 904 896 .
Chr2	stalkie_big_nohaplotig	exon	73613958	73613966	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 913 905 .
Chr2	stalkie_big_nohaplotig	exon	73614952	73614953	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 931 930 .
Chr2	stalkie_big_nohaplotig	exon	73621809	73621819	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 942 932 .
Chr2	stalkie_big_nohaplotig	exon	73624651	73624663	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 955 943 .
Chr2	stalkie_big_nohaplotig	exon	73632762	73632771	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 994 985 .
Chr2	stalkie_big_nohaplotig	exon	73632804	73632809	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1048 1043 .
Chr2	stalkie_big_nohaplotig	exon	73640470	73640473	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1052 1049 .
Chr2	stalkie_big_nohaplotig	exon	73647632	73647640	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1061 1053 .
Chr2	stalkie_big_nohaplotig	exon	73647652	73647659	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1102 1095 .
Chr2	stalkie_big_nohaplotig	exon	73653165	73653168	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1106 1103 .
Chr2	stalkie_big_nohaplotig	exon	73654094	73654098	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1111 1107 .
Chr2	stalkie_big_nohaplotig	exon	73657670	73657677	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1119 1112 .
Chr2	stalkie_big_nohaplotig	exon	73662032	73662035	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1123 1120 .
Chr2	stalkie_big_nohaplotig	exon	73665551	73665554	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1127 1124 .
Chr2	stalkie_big_nohaplotig	exon	73669511	73669519	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1136 1128 .
Chr2	stalkie_big_nohaplotig	exon	73669560	73669565	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1188 1183 .
Chr2	stalkie_big_nohaplotig	exon	73685073	73685080	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1196 1189 .
Chr2	stalkie_big_nohaplotig	exon	73685101	73685108	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1249 1242 .
Chr2	stalkie_big_nohaplotig	exon	73685116	73685125	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1269 1260 .
Chr2	stalkie_big_nohaplotig	exon	74034106	74034110	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1380 1376 .
Chr2	stalkie_big_nohaplotig	exon	74034420	74034428	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1389 1381 .
Chr2	stalkie_big_nohaplotig	exon	74038991	74038995	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1394 1390 .
Chr2	stalkie_big_nohaplotig	exon	74039402	74039410	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1403 1395 .
Chr2	stalkie_big_nohaplotig	exon	74041712	74041718	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1410 1404 .
Chr2	stalkie_big_nohaplotig	exon	74044365	74044366	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1412 1411 .
Chr2	stalkie_big_nohaplotig	exon	74048437	74048444	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1420 1413 .
Chr2	stalkie_big_nohaplotig	exon	74048466	74048468	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1466 1464 .
Chr2	stalkie_big_nohaplotig	exon	74055095	74055101	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1473 1467 .
Chr2	stalkie_big_nohaplotig	exon	74056326	74056336	100	+	.	Parent=comp162690_c2_seq1.mrna1;Target=comp162690_c2_seq1 1484 1474 .
Chr2	stalkie_big_nohaplotig	CDS	73632765	73632771	.	+	0	Parent=comp162690_c2_seq1.mrna1
Chr2	gffcl	locus	73634032	73634693	.	-	.	ID=RLOC_00018406;geneIDs=comp117519_c0_seq1.path1;transcripts=comp117519_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	73634032	73634693	.	-	.	ID=comp117519_c0_seq1.mrna1;geneID=comp117519_c0_seq1.path1;Name=comp117519_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=662;mismatches=0;indels=0;unknowns=0;Target=comp117519_c0_seq1 662 1 .;CDS_Target=comp117519_c0_seq1 506 411 .;locus=RLOC_00018406
Chr2	stalkie_big_nohaplotig	exon	73634032	73634693	100	-	.	Parent=comp117519_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	73634188	73634283	.	-	0	Parent=comp117519_c0_seq1.mrna1
Chr2	gffcl	locus	73634742	75462997	.	-	.	ID=RLOC_00018407;geneIDs=comp58562_c0_seq1.path1;transcripts=comp58562_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	73634742	75462997	.	-	.	ID=comp58562_c0_seq1.mrna1;geneID=comp58562_c0_seq1.path1;Name=comp58562_c0_seq1;Dir=sensecoverage=99.8;identity=99.5;matches=949;mismatches=5;indels=0;unknowns=0;locus=RLOC_00018407
Chr2	stalkie_big_nohaplotig	exon	73634742	73635220	100	-	.	Parent=comp58562_c0_seq1.mrna1;Target=comp58562_c0_seq1 478 956 +
Chr2	stalkie_big_nohaplotig	exon	73635276	73635350	100	-	.	Parent=comp58562_c0_seq1.mrna1;Target=comp58562_c0_seq1 403 477 +
Chr2	stalkie_big_nohaplotig	exon	73635408	73635592	100	-	.	Parent=comp58562_c0_seq1.mrna1;Target=comp58562_c0_seq1 218 402 +
Chr2	stalkie_big_nohaplotig	exon	75462783	75462997	97	-	.	Parent=comp58562_c0_seq1.mrna1;Target=comp58562_c0_seq1 3 217 +
Chr2	stalkie_big_nohaplotig	CDS	73635149	73635220	.	-	0	Parent=comp58562_c0_seq1.mrna1;Target=comp58562_c0_seq1 478 549 +
Chr2	stalkie_big_nohaplotig	CDS	73635276	73635350	.	-	0	Parent=comp58562_c0_seq1.mrna1;Target=comp58562_c0_seq1 403 477 +
Chr2	stalkie_big_nohaplotig	CDS	73635408	73635515	.	-	0	Parent=comp58562_c0_seq1.mrna1;Target=comp58562_c0_seq1 295 402 +
Chr2	gffcl	locus	73691226	73692193	.	+	.	ID=RLOC_00018410;geneIDs=comp162746_c0_seq1.path4;transcripts=comp162746_c0_seq1.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	73691226	73692193	.	+	.	ID=comp162746_c0_seq1.mrna4;geneID=comp162746_c0_seq1.path4;Name=comp162746_c0_seq1;Dir=indeterminatecoverage=89.1;identity=99.5;matches=963;mismatches=5;indels=0;unknowns=0;Target=comp162746_c0_seq1 1067 100 .;CDS_Target=comp162746_c0_seq1 961 521 .;locus=RLOC_00018410
Chr2	stalkie_big_nohaplotig	exon	73691226	73692193	99	+	.	Parent=comp162746_c0_seq1.mrna4
Chr2	stalkie_big_nohaplotig	CDS	73691647	73692087	.	+	0	Parent=comp162746_c0_seq1.mrna4
Chr2	gffcl	locus	73824187	73824593	.	+	.	ID=RLOC_00018411;geneIDs=FBgn0014001.1.path1;transcripts=FBgn0014001.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	73824187	73824593	.	+	.	ID=FBgn0014001.1.mrna1;geneID=FBgn0014001.1.path1;Name=FBgn0014001.1;Dir=sensecoverage=16.6;identity=100.0;matches=352;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018411
Chr2	stalkie_big_nohaplotig	exon	73824187	73824383	100	+	.	Parent=FBgn0014001.1.mrna1;Target=FBgn0014001.1 9 205 +
Chr2	stalkie_big_nohaplotig	exon	73824439	73824593	100	+	.	Parent=FBgn0014001.1.mrna1;Target=FBgn0014001.1 206 360 +
Chr2	stalkie_big_nohaplotig	CDS	73824188	73824383	.	+	0	Parent=FBgn0014001.1.mrna1;Target=FBgn0014001.1 10 205 +
Chr2	stalkie_big_nohaplotig	CDS	73824439	73824593	.	+	2	Parent=FBgn0014001.1.mrna1;Target=FBgn0014001.1 206 360 +
Chr2	gffcl	locus	73840039	73841799	.	+	.	ID=RLOC_00018412;geneIDs=Dp_FBgn0250603.path2,comp163088_c0_seq1.path1;transcripts=comp163088_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	73840039	73841799	.	+	.	ID=comp163088_c0_seq1.mrna1;geneID=comp163088_c0_seq1.path1;Name=comp163088_c0_seq1;Dir=indeterminatecoverage=94.4;identity=97.2;matches=1731;mismatches=24;indels=25;unknowns=0;Target=comp163088_c0_seq1 1857 84 .;CDS_Target=comp163088_c0_seq1 938 123 .;locus=RLOC_00018412
Chr2	stalkie_big_nohaplotig	exon	73840039	73841799	97	+	.	Parent=comp163088_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	73840078	73840893	.	+	0	Parent=comp163088_c0_seq1.mrna1
Chr2	gffcl	locus	73888511	73888777	.	-	.	ID=RLOC_00018413;geneIDs=FBgn0026199.1.path2;transcripts=FBgn0026199.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	73888511	73888777	.	-	.	ID=FBgn0026199.1.mrna2;geneID=FBgn0026199.1.path2;Name=FBgn0026199.1;Dir=indeterminatecoverage=23.8;identity=100.0;matches=267;mismatches=0;indels=0;unknowns=0;Target=FBgn0026199.1 1120 854 .;CDS_Target=FBgn0026199.1 1119 854 .;locus=RLOC_00018413
Chr2	stalkie_big_nohaplotig	exon	73888511	73888777	100	-	.	Parent=FBgn0026199.1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	73888512	73888777	.	-	1	Parent=FBgn0026199.1.mrna2
Chr2	gffcl	locus	73953203	73962086	.	+	.	ID=RLOC_00018414;geneIDs=FBgn0026199.1.path1;transcripts=FBgn0026199.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	73953203	73962086	.	+	.	ID=FBgn0026199.1.mrna1;geneID=FBgn0026199.1.path1;Name=FBgn0026199.1;Dir=indeterminatecoverage=74.2;identity=99.9;matches=832;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018414
Chr2	stalkie_big_nohaplotig	exon	73953203	73954029	99	+	.	Parent=FBgn0026199.1.mrna1;Target=FBgn0026199.1 847 21 .
Chr2	stalkie_big_nohaplotig	exon	73962081	73962086	100	+	.	Parent=FBgn0026199.1.mrna1;Target=FBgn0026199.1 853 848 .
Chr2	stalkie_big_nohaplotig	CDS	73953204	73954029	.	+	0	Parent=FBgn0026199.1.mrna1;Target=FBgn0026199.1 847 22 .
Chr2	stalkie_big_nohaplotig	CDS	73962081	73962086	.	+	2	Parent=FBgn0026199.1.mrna1;Target=FBgn0026199.1 853 848 .
Chr2	gffcl	locus	74049195	74050105	.	-	.	ID=RLOC_00018418;geneIDs=comp146307_c0_seq1.path1;transcripts=comp146307_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	74049195	74050105	.	-	.	ID=comp146307_c0_seq1.mrna1;geneID=comp146307_c0_seq1.path1;Name=comp146307_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=857;mismatches=1;indels=2;unknowns=0;locus=RLOC_00018418
Chr2	stalkie_big_nohaplotig	exon	74049195	74049579	99	-	.	Parent=comp146307_c0_seq1.mrna1;Target=comp146307_c0_seq1 859 475 .
Chr2	stalkie_big_nohaplotig	exon	74049632	74050105	99	-	.	Parent=comp146307_c0_seq1.mrna1;Target=comp146307_c0_seq1 474 1 .
Chr2	stalkie_big_nohaplotig	CDS	74049572	74049579	.	-	2	Parent=comp146307_c0_seq1.mrna1;Target=comp146307_c0_seq1 482 475 .
Chr2	stalkie_big_nohaplotig	CDS	74049632	74049725	.	-	0	Parent=comp146307_c0_seq1.mrna1;Target=comp146307_c0_seq1 474 381 .
Chr2	gffcl	locus	74050310	74050522	.	-	.	ID=RLOC_00018419;geneIDs=comp142821_c1_seq1.path1;transcripts=comp142821_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	74050310	74050522	.	-	.	ID=comp142821_c1_seq1.mrna1;geneID=comp142821_c1_seq1.path1;Name=comp142821_c1_seq1;Dir=indeterminatecoverage=48.6;identity=96.3;matches=206;mismatches=7;indels=1;unknowns=0;Target=comp142821_c1_seq1 309 96 .;CDS_Target=comp142821_c1_seq1 245 96 .;locus=RLOC_00018419
Chr2	stalkie_big_nohaplotig	exon	74050310	74050522	96	-	.	Parent=comp142821_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	74050374	74050522	.	-	0	Parent=comp142821_c1_seq1.mrna1
Chr2	gffcl	locus	74082611	74094497	.	+	.	ID=RLOC_00018420;geneIDs=comp163954_c1_seq1.path1;transcripts=comp163954_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	74082611	74094497	.	+	.	ID=comp163954_c1_seq1.mrna1;geneID=comp163954_c1_seq1.path1;Name=comp163954_c1_seq1;Dir=indeterminatecoverage=89.2;identity=97.8;matches=7401;mismatches=64;indels=100;unknowns=0;Target=comp163954_c1_seq1 6556 6221 .;locus=RLOC_00018420
Chr2	stalkie_big_nohaplotig	exon	74082611	74082624	54	+	.	Parent=comp163954_c1_seq1.mrna1;Target=comp163954_c1_seq1 932 912 .
Chr2	stalkie_big_nohaplotig	exon	74083790	74083806	82	+	.	Parent=comp163954_c1_seq1.mrna1;Target=comp163954_c1_seq1 948 933 .
Chr2	stalkie_big_nohaplotig	exon	74087032	74094497	97	+	.	Parent=comp163954_c1_seq1.mrna1;Target=comp163954_c1_seq1 8444 949 .
Chr2	stalkie_big_nohaplotig	CDS	74092283	74092609	.	+	0	Parent=comp163954_c1_seq1.mrna1
Chr2	gffcl	locus	74101277	74102051	.	-	.	ID=RLOC_00018421;geneIDs=comp118747_c0_seq1.path1;transcripts=comp118747_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	74101277	74102051	.	-	.	ID=comp118747_c0_seq1.mrna1;geneID=comp118747_c0_seq1.path1;Name=comp118747_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=775;mismatches=0;indels=0;unknowns=0;Target=comp118747_c0_seq1 775 1 .;CDS_Target=comp118747_c0_seq1 268 143 .;locus=RLOC_00018421
Chr2	stalkie_big_nohaplotig	exon	74101277	74102051	100	-	.	Parent=comp118747_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	74101784	74101909	.	-	0	Parent=comp118747_c0_seq1.mrna1
Chr2	gffcl	locus	74102536	74103470	.	+	.	ID=RLOC_00018422;geneIDs=comp154731_c0_seq1.path1;transcripts=comp154731_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	74102536	74103470	.	+	.	ID=comp154731_c0_seq1.mrna1;geneID=comp154731_c0_seq1.path1;Name=comp154731_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.9;matches=934;mismatches=1;indels=0;unknowns=0;Target=comp154731_c0_seq1 936 2 .;CDS_Target=comp154731_c0_seq1 657 520 .;locus=RLOC_00018422
Chr2	stalkie_big_nohaplotig	exon	74102536	74103470	99	+	.	Parent=comp154731_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	74103054	74103191	.	+	0	Parent=comp154731_c0_seq1.mrna1
Chr2	gffcl	locus	74107902	74108395	.	-	.	ID=RLOC_00018423;geneIDs=CPIJ014761.path2;transcripts=CPIJ014761.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	74107902	74108395	.	-	.	ID=CPIJ014761.mrna2;geneID=CPIJ014761.path2;Name=CPIJ014761;Dir=indeterminatecoverage=87.6;identity=100.0;matches=494;mismatches=0;indels=0;unknowns=0;Target=CPIJ014761 564 71 .;locus=RLOC_00018423
Chr2	stalkie_big_nohaplotig	exon	74107902	74108395	100	-	.	Parent=CPIJ014761.mrna2
Chr2	stalkie_big_nohaplotig	CDS	74107902	74108395	.	-	1	Parent=CPIJ014761.mrna2
Chr2	gffcl	locus	74198519	74200155	.	-	.	ID=RLOC_00018424;geneIDs=ORF585.path7;transcripts=ORF585.mrna7
Chr2	stalkie_big_nohaplotig	mRNA	74198519	74200155	.	-	.	ID=ORF585.mrna7;geneID=ORF585.path7;Name=ORF585;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1625;mismatches=12;indels=1;unknowns=0;Target=ORF585 1638 1 .;locus=RLOC_00018424
Chr2	stalkie_big_nohaplotig	exon	74198519	74200155	99	-	.	Parent=ORF585.mrna7
Chr2	stalkie_big_nohaplotig	CDS	74198519	74200155	.	-	0	Parent=ORF585.mrna7
Chr2	gffcl	locus	74210110	74210359	.	+	.	ID=RLOC_00018425;geneIDs=comp137198_c0_seq1.path1;transcripts=comp137198_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	74210110	74210359	.	+	.	ID=comp137198_c0_seq1.mrna1;geneID=comp137198_c0_seq1.path1;Name=comp137198_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=250;mismatches=0;indels=0;unknowns=0;Target=comp137198_c0_seq1 250 1 .;CDS_Target=comp137198_c0_seq1 117 1 .;locus=RLOC_00018425
Chr2	stalkie_big_nohaplotig	exon	74210110	74210359	100	+	.	Parent=comp137198_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	74210110	74210226	.	+	0	Parent=comp137198_c0_seq1.mrna1
Chr2	gffcl	locus	74260195	74282430	.	-	.	ID=RLOC_00018426;geneIDs=comp161455_c1_seq1.path1;transcripts=comp161455_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	74260195	74282430	.	-	.	ID=comp161455_c1_seq1.mrna1;geneID=comp161455_c1_seq1.path1;Name=comp161455_c1_seq1;Dir=antisensecoverage=99.8;identity=95.8;matches=973;mismatches=19;indels=24;unknowns=0;Target=comp161455_c1_seq1 818 991 .;locus=RLOC_00018426
Chr2	stalkie_big_nohaplotig	exon	74260195	74260453	99	-	.	Parent=comp161455_c1_seq1.mrna1;Target=comp161455_c1_seq1 1 259 -
Chr2	stalkie_big_nohaplotig	exon	74281619	74281670	100	-	.	Parent=comp161455_c1_seq1.mrna1;Target=comp161455_c1_seq1 260 311 -
Chr2	stalkie_big_nohaplotig	exon	74281727	74282430	94	-	.	Parent=comp161455_c1_seq1.mrna1;Target=comp161455_c1_seq1 312 993 -
Chr2	stalkie_big_nohaplotig	CDS	74282255	74282428	.	-	0	Parent=comp161455_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	74287699	74288319	.	-	.	ID=comp146256_c0_seq1.mrna1;geneID=comp146256_c0_seq1.path1;Name=comp146256_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=621;mismatches=0;indels=0;unknowns=0;Target=comp146256_c0_seq1 621 1 .;CDS_Target=comp146256_c0_seq1 70 2 .;locus=RLOC_00018427
Chr2	stalkie_big_nohaplotig	exon	74287699	74288319	100	-	.	Parent=comp146256_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	74288250	74288318	.	-	0	Parent=comp146256_c0_seq1.mrna1
Chr2	gffcl	locus	74483808	74484344	.	-	.	ID=RLOC_00018432;geneIDs=comp133351_c0_seq1.path1;transcripts=comp133351_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	74483808	74484344	.	-	.	ID=comp133351_c0_seq1.mrna1;geneID=comp133351_c0_seq1.path1;Name=comp133351_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=537;mismatches=0;indels=0;unknowns=0;Target=comp133351_c0_seq1 537 1 .;CDS_Target=comp133351_c0_seq1 445 353 .;locus=RLOC_00018432
Chr2	stalkie_big_nohaplotig	exon	74483808	74484344	100	-	.	Parent=comp133351_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	74483900	74483992	.	-	0	Parent=comp133351_c0_seq1.mrna1
Chr2	gffcl	locus	74484585	74745198	.	+	.	ID=RLOC_00018433;geneIDs=FBgn0066101.1.path1,comp753614_c0_seq1.path1;transcripts=FBgn0066101.1.mrna1,comp753614_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	74484585	74745198	.	+	.	ID=FBgn0066101.1.mrna1;geneID=FBgn0066101.1.path1;Name=FBgn0066101.1;Dir=sensecoverage=87.3;identity=100.0;matches=2824;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018433
Chr2	stalkie_big_nohaplotig	exon	74484585	74485092	100	+	.	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 1 508 +
Chr2	stalkie_big_nohaplotig	exon	74592942	74593082	100	+	.	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 509 649 +
Chr2	stalkie_big_nohaplotig	exon	74634788	74634907	100	+	.	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 650 769 +
Chr2	stalkie_big_nohaplotig	exon	74635208	74635324	100	+	.	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 770 886 +
Chr2	stalkie_big_nohaplotig	exon	74674499	74674621	100	+	.	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 887 1009 +
Chr2	stalkie_big_nohaplotig	exon	74678836	74679062	100	+	.	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 1010 1236 +
Chr2	stalkie_big_nohaplotig	exon	74716126	74716390	100	+	.	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 1237 1501 +
Chr2	stalkie_big_nohaplotig	exon	74716472	74716694	100	+	.	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 1502 1724 +
Chr2	stalkie_big_nohaplotig	exon	74730268	74730600	100	+	.	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 1725 2057 +
Chr2	stalkie_big_nohaplotig	exon	74738637	74738855	100	+	.	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 2058 2276 +
Chr2	stalkie_big_nohaplotig	exon	74740590	74740938	100	+	.	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 2277 2625 +
Chr2	stalkie_big_nohaplotig	exon	74745000	74745198	100	+	.	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 2626 2824 +
Chr2	stalkie_big_nohaplotig	CDS	74484585	74485092	.	+	0	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 1 508 +
Chr2	stalkie_big_nohaplotig	CDS	74592942	74593082	.	+	2	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 509 649 +
Chr2	stalkie_big_nohaplotig	CDS	74634788	74634907	.	+	2	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 650 769 +
Chr2	stalkie_big_nohaplotig	CDS	74635208	74635324	.	+	2	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 770 886 +
Chr2	stalkie_big_nohaplotig	CDS	74674499	74674621	.	+	2	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 887 1009 +
Chr2	stalkie_big_nohaplotig	CDS	74678836	74679062	.	+	2	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 1010 1236 +
Chr2	stalkie_big_nohaplotig	CDS	74716126	74716390	.	+	0	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 1237 1501 +
Chr2	stalkie_big_nohaplotig	CDS	74716472	74716694	.	+	2	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 1502 1724 +
Chr2	stalkie_big_nohaplotig	CDS	74730268	74730600	.	+	1	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 1725 2057 +
Chr2	stalkie_big_nohaplotig	CDS	74738637	74738855	.	+	1	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 2058 2276 +
Chr2	stalkie_big_nohaplotig	CDS	74740590	74740938	.	+	1	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 2277 2625 +
Chr2	stalkie_big_nohaplotig	CDS	74745000	74745197	.	+	0	Parent=FBgn0066101.1.mrna1;Target=FBgn0066101.1 2626 2823 +
Chr2	stalkie_big_nohaplotig	mRNA	74635301	74635719	.	+	.	ID=comp753614_c0_seq1.mrna1;geneID=comp753614_c0_seq1.path1;Name=comp753614_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=419;mismatches=0;indels=0;unknowns=0;Target=comp753614_c0_seq1 419 1 .;CDS_Target=comp753614_c0_seq1 390 298 .;locus=RLOC_00018433
Chr2	stalkie_big_nohaplotig	exon	74635301	74635719	100	+	.	Parent=comp753614_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	74635598	74635690	.	+	0	Parent=comp753614_c0_seq1.mrna1
Chr2	gffcl	locus	74502206	74503042	.	-	.	ID=RLOC_00018434;geneIDs=Dp_FBgn0250603.path3;transcripts=Dp_FBgn0250603.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	74502206	74503042	.	-	.	ID=Dp_FBgn0250603.mrna3;geneID=Dp_FBgn0250603.path3;Name=Dp_FBgn0250603;Dir=indeterminatecoverage=100.0;identity=99.9;matches=836;mismatches=1;indels=0;unknowns=0;Target=Dp_FBgn0250603 837 1 .;locus=RLOC_00018434
Chr2	stalkie_big_nohaplotig	exon	74502206	74503042	99	-	.	Parent=Dp_FBgn0250603.mrna3
Chr2	stalkie_big_nohaplotig	CDS	74502206	74503042	.	-	0	Parent=Dp_FBgn0250603.mrna3
Chr2	gffcl	locus	74506274	74688344	.	-	.	ID=RLOC_00018435;geneIDs=comp163731_c1_seq1.path2;transcripts=comp163731_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	74506274	74688344	.	-	.	ID=comp163731_c1_seq1.mrna2;geneID=comp163731_c1_seq1.path2;Name=comp163731_c1_seq1;Dir=indeterminatecoverage=70.0;identity=98.5;matches=3619;mismatches=42;indels=14;unknowns=0;Target=comp163731_c1_seq1 1818 1036 .;locus=RLOC_00018435
Chr2	stalkie_big_nohaplotig	exon	74506274	74506280	100	-	.	Parent=comp163731_c1_seq1.mrna2;Target=comp163731_c1_seq1 4748 4742 .
Chr2	stalkie_big_nohaplotig	exon	74512696	74512701	100	-	.	Parent=comp163731_c1_seq1.mrna2;Target=comp163731_c1_seq1 4741 4736 .
Chr2	stalkie_big_nohaplotig	exon	74532597	74532604	100	-	.	Parent=comp163731_c1_seq1.mrna2;Target=comp163731_c1_seq1 4735 4728 .
Chr2	stalkie_big_nohaplotig	exon	74536602	74536606	100	-	.	Parent=comp163731_c1_seq1.mrna2;Target=comp163731_c1_seq1 4727 4723 .
Chr2	stalkie_big_nohaplotig	exon	74536617	74536625	100	-	.	Parent=comp163731_c1_seq1.mrna2;Target=comp163731_c1_seq1 4691 4683 .
Chr2	stalkie_big_nohaplotig	exon	74548714	74548722	100	-	.	Parent=comp163731_c1_seq1.mrna2;Target=comp163731_c1_seq1 4628 4620 .
Chr2	stalkie_big_nohaplotig	exon	74569700	74569701	100	-	.	Parent=comp163731_c1_seq1.mrna2;Target=comp163731_c1_seq1 4619 4618 .
Chr2	stalkie_big_nohaplotig	exon	74571215	74571222	100	-	.	Parent=comp163731_c1_seq1.mrna2;Target=comp163731_c1_seq1 4617 4610 .
Chr2	stalkie_big_nohaplotig	exon	74578476	74578480	100	-	.	Parent=comp163731_c1_seq1.mrna2;Target=comp163731_c1_seq1 4609 4605 .
Chr2	stalkie_big_nohaplotig	exon	74631589	74631611	55	-	.	Parent=comp163731_c1_seq1.mrna2;Target=comp163731_c1_seq1 4537 4513 .
Chr2	stalkie_big_nohaplotig	exon	74636856	74636867	100	-	.	Parent=comp163731_c1_seq1.mrna2;Target=comp163731_c1_seq1 4488 4477 .
Chr2	stalkie_big_nohaplotig	exon	74639001	74639005	100	-	.	Parent=comp163731_c1_seq1.mrna2;Target=comp163731_c1_seq1 4476 4472 .
Chr2	stalkie_big_nohaplotig	exon	74655088	74655096	100	-	.	Parent=comp163731_c1_seq1.mrna2;Target=comp163731_c1_seq1 4471 4463 .
Chr2	stalkie_big_nohaplotig	exon	74662316	74662325	100	-	.	Parent=comp163731_c1_seq1.mrna2;Target=comp163731_c1_seq1 4425 4416 .
Chr2	stalkie_big_nohaplotig	exon	74663303	74663308	100	-	.	Parent=comp163731_c1_seq1.mrna2;Target=comp163731_c1_seq1 4415 4410 .
Chr2	stalkie_big_nohaplotig	exon	74670419	74670423	100	-	.	Parent=comp163731_c1_seq1.mrna2;Target=comp163731_c1_seq1 4409 4405 .
Chr2	stalkie_big_nohaplotig	exon	74671634	74671644	100	-	.	Parent=comp163731_c1_seq1.mrna2;Target=comp163731_c1_seq1 4389 4379 .
Chr2	stalkie_big_nohaplotig	exon	74684825	74688344	98	-	.	Parent=comp163731_c1_seq1.mrna2;Target=comp163731_c1_seq1 4378 851 .
Chr2	stalkie_big_nohaplotig	CDS	74687379	74688159	.	-	0	Parent=comp163731_c1_seq1.mrna2
Chr2	gffcl	locus	74526511	74591931	.	+	.	ID=RLOC_00018436;geneIDs=comp147589_c0_seq1.path9;transcripts=comp147589_c0_seq1.mrna9
Chr2	stalkie_big_nohaplotig	mRNA	74526511	74591931	.	+	.	ID=comp147589_c0_seq1.mrna9;geneID=comp147589_c0_seq1.path9;Name=comp147589_c0_seq1;Dir=indeterminatecoverage=95.3;identity=95.7;matches=1036;mismatches=23;indels=24;unknowns=0;Target=comp147589_c0_seq1 874 2 .;locus=RLOC_00018436
Chr2	stalkie_big_nohaplotig	exon	74526511	74527504	98	+	.	Parent=comp147589_c0_seq1.mrna9;Target=comp147589_c0_seq1 993 1 .
Chr2	stalkie_big_nohaplotig	exon	74534687	74534688	100	+	.	Parent=comp147589_c0_seq1.mrna9;Target=comp147589_c0_seq1 995 994 .
Chr2	stalkie_big_nohaplotig	exon	74547359	74547402	47	+	.	Parent=comp147589_c0_seq1.mrna9;Target=comp147589_c0_seq1 1056 996 .
Chr2	stalkie_big_nohaplotig	exon	74548328	74548334	100	+	.	Parent=comp147589_c0_seq1.mrna9;Target=comp147589_c0_seq1 1063 1057 .
Chr2	stalkie_big_nohaplotig	exon	74555721	74555722	100	+	.	Parent=comp147589_c0_seq1.mrna9;Target=comp147589_c0_seq1 1065 1064 .
Chr2	stalkie_big_nohaplotig	exon	74568422	74568427	100	+	.	Parent=comp147589_c0_seq1.mrna9;Target=comp147589_c0_seq1 1071 1066 .
Chr2	stalkie_big_nohaplotig	exon	74575912	74575916	100	+	.	Parent=comp147589_c0_seq1.mrna9;Target=comp147589_c0_seq1 1076 1072 .
Chr2	stalkie_big_nohaplotig	exon	74591929	74591931	66	+	.	Parent=comp147589_c0_seq1.mrna9;Target=comp147589_c0_seq1 1079 1077 .
Chr2	stalkie_big_nohaplotig	CDS	74526512	74527388	.	+	0	Parent=comp147589_c0_seq1.mrna9
Chr2	gffcl	locus	74576466	74577178	.	+	.	ID=RLOC_00018438;geneIDs=comp139064_c0_seq1.path1;transcripts=comp139064_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	74576466	74577178	.	+	.	ID=comp139064_c0_seq1.mrna1;geneID=comp139064_c0_seq1.path1;Name=comp139064_c0_seq1;Dir=antisensecoverage=97.8;identity=99.6;matches=538;mismatches=0;indels=2;unknowns=0;Target=comp139064_c0_seq1 209 304 .;locus=RLOC_00018438
Chr2	stalkie_big_nohaplotig	exon	74576466	74576819	100	+	.	Parent=comp139064_c0_seq1.mrna1;Target=comp139064_c0_seq1 199 552 -
Chr2	stalkie_big_nohaplotig	exon	74576888	74576961	100	+	.	Parent=comp139064_c0_seq1.mrna1;Target=comp139064_c0_seq1 125 198 -
Chr2	stalkie_big_nohaplotig	exon	74577069	74577178	98	+	.	Parent=comp139064_c0_seq1.mrna1;Target=comp139064_c0_seq1 13 124 -
Chr2	stalkie_big_nohaplotig	CDS	74576714	74576809	.	+	0	Parent=comp139064_c0_seq1.mrna1
Chr2	gffcl	locus	74615409	74615997	.	+	.	ID=RLOC_00018439;geneIDs=comp90144_c0_seq1.path1;transcripts=comp90144_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	74615409	74615997	.	+	.	ID=comp90144_c0_seq1.mrna1;geneID=comp90144_c0_seq1.path1;Name=comp90144_c0_seq1;Dir=indeterminatecoverage=97.7;identity=99.8;matches=589;mismatches=0;indels=1;unknowns=0;Target=comp90144_c0_seq1 602 13 .;CDS_Target=comp90144_c0_seq1 469 389 .;locus=RLOC_00018439
Chr2	stalkie_big_nohaplotig	exon	74615409	74615997	99	+	.	Parent=comp90144_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	74615784	74615864	.	+	0	Parent=comp90144_c0_seq1.mrna1
Chr2	gffcl	locus	74617997	74622532	.	+	.	ID=RLOC_00018440;geneIDs=comp147274_c0_seq1.path1;transcripts=comp147274_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	74617997	74622532	.	+	.	ID=comp147274_c0_seq1.mrna1;geneID=comp147274_c0_seq1.path1;Name=comp147274_c0_seq1;Dir=antisensecoverage=96.3;identity=100.0;matches=601;mismatches=0;indels=0;unknowns=0;Target=comp147274_c0_seq1 25 138 .;locus=RLOC_00018440
Chr2	stalkie_big_nohaplotig	exon	74617997	74618318	100	+	.	Parent=comp147274_c0_seq1.mrna1;Target=comp147274_c0_seq1 303 624 -
Chr2	stalkie_big_nohaplotig	exon	74622254	74622532	100	+	.	Parent=comp147274_c0_seq1.mrna1;Target=comp147274_c0_seq1 24 302 -
Chr2	stalkie_big_nohaplotig	CDS	74622418	74622531	.	+	0	Parent=comp147274_c0_seq1.mrna1
Chr2	gffcl	locus	74782879	75723012	.	+	.	ID=RLOC_00018442;geneIDs=FBgn0262483.1.path1,comp162062_c2_seq1.path1;transcripts=comp162062_c2_seq1.mrna1,FBgn0262483.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	74782879	75723012	.	+	.	ID=comp162062_c2_seq1.mrna1;geneID=comp162062_c2_seq1.path1;Name=comp162062_c2_seq1;Dir=antisensecoverage=58.2;identity=100.0;matches=2741;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018442
Chr2	stalkie_big_nohaplotig	exon	74782879	74782891	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 4618 4630 -
Chr2	stalkie_big_nohaplotig	exon	74788861	74788865	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 4613 4617 -
Chr2	stalkie_big_nohaplotig	exon	74790264	74790265	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 4611 4612 -
Chr2	stalkie_big_nohaplotig	exon	74792511	74792516	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 4605 4610 -
Chr2	stalkie_big_nohaplotig	exon	74795383	74795390	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 4597 4604 -
Chr2	stalkie_big_nohaplotig	exon	74814435	74814438	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 4593 4596 -
Chr2	stalkie_big_nohaplotig	exon	74821235	74821241	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 4586 4592 -
Chr2	stalkie_big_nohaplotig	exon	74843518	74843523	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 4580 4585 -
Chr2	stalkie_big_nohaplotig	exon	74847134	74847140	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 4573 4579 -
Chr2	stalkie_big_nohaplotig	exon	74854787	74854789	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 4570 4572 -
Chr2	stalkie_big_nohaplotig	exon	74862445	74862448	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 4566 4569 -
Chr2	stalkie_big_nohaplotig	exon	74862487	74862497	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 4510 4520 -
Chr2	stalkie_big_nohaplotig	exon	74870521	74870524	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 4506 4509 -
Chr2	stalkie_big_nohaplotig	exon	74877872	74877875	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 4502 4505 -
Chr2	stalkie_big_nohaplotig	exon	75706519	75706633	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 4385 4499 -
Chr2	stalkie_big_nohaplotig	exon	75708852	75708974	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 4262 4384 -
Chr2	stalkie_big_nohaplotig	exon	75715090	75715188	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 4163 4261 -
Chr2	stalkie_big_nohaplotig	exon	75715333	75715533	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 3962 4162 -
Chr2	stalkie_big_nohaplotig	exon	75719291	75719402	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 3850 3961 -
Chr2	stalkie_big_nohaplotig	exon	75719457	75719492	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 3814 3849 -
Chr2	stalkie_big_nohaplotig	exon	75719555	75719925	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 3443 3813 -
Chr2	stalkie_big_nohaplotig	exon	75721062	75721608	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 2896 3442 -
Chr2	stalkie_big_nohaplotig	exon	75721704	75721815	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 2784 2895 -
Chr2	stalkie_big_nohaplotig	exon	75721877	75722022	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 2638 2783 -
Chr2	stalkie_big_nohaplotig	exon	75722089	75722289	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 2437 2637 -
Chr2	stalkie_big_nohaplotig	exon	75722367	75722557	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 2246 2436 -
Chr2	stalkie_big_nohaplotig	exon	75722610	75723012	100	+	.	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 1843 2245 -
Chr2	stalkie_big_nohaplotig	CDS	75708858	75708974	.	+	0	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 4262 4378 .
Chr2	stalkie_big_nohaplotig	CDS	75715090	75715188	.	+	0	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 4163 4261 .
Chr2	stalkie_big_nohaplotig	CDS	75715333	75715533	.	+	0	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 3962 4162 .
Chr2	stalkie_big_nohaplotig	CDS	75719291	75719402	.	+	0	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 3850 3961 .
Chr2	stalkie_big_nohaplotig	CDS	75719457	75719492	.	+	2	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 3814 3849 .
Chr2	stalkie_big_nohaplotig	CDS	75719555	75719925	.	+	2	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 3443 3813 .
Chr2	stalkie_big_nohaplotig	CDS	75721062	75721608	.	+	0	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 2896 3442 .
Chr2	stalkie_big_nohaplotig	CDS	75721704	75721815	.	+	2	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 2784 2895 .
Chr2	stalkie_big_nohaplotig	CDS	75721877	75722022	.	+	1	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 2638 2783 .
Chr2	stalkie_big_nohaplotig	CDS	75722089	75722289	.	+	2	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 2437 2637 .
Chr2	stalkie_big_nohaplotig	CDS	75722367	75722557	.	+	2	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 2246 2436 .
Chr2	stalkie_big_nohaplotig	CDS	75722610	75723011	.	+	0	Parent=comp162062_c2_seq1.mrna1;Target=comp162062_c2_seq1 1844 2245 .
Chr2	stalkie_big_nohaplotig	mRNA	75707324	75723011	.	+	.	ID=FBgn0262483.1.mrna1;geneID=FBgn0262483.1.path1;Name=FBgn0262483.1;Dir=sensecoverage=58.2;identity=100.0;matches=2562;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018442
Chr2	stalkie_big_nohaplotig	exon	75707324	75707344	100	+	.	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 1 21 +
Chr2	stalkie_big_nohaplotig	exon	75708852	75708974	100	+	.	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 22 144 +
Chr2	stalkie_big_nohaplotig	exon	75715090	75715188	100	+	.	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 145 243 +
Chr2	stalkie_big_nohaplotig	exon	75715333	75715533	100	+	.	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 244 444 +
Chr2	stalkie_big_nohaplotig	exon	75719291	75719402	100	+	.	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 445 556 +
Chr2	stalkie_big_nohaplotig	exon	75719457	75719492	100	+	.	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 557 592 +
Chr2	stalkie_big_nohaplotig	exon	75719555	75719925	100	+	.	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 593 963 +
Chr2	stalkie_big_nohaplotig	exon	75721062	75721608	100	+	.	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 964 1510 +
Chr2	stalkie_big_nohaplotig	exon	75721704	75721815	100	+	.	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 1511 1622 +
Chr2	stalkie_big_nohaplotig	exon	75721877	75722022	100	+	.	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 1623 1768 +
Chr2	stalkie_big_nohaplotig	exon	75722089	75722289	100	+	.	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 1769 1969 +
Chr2	stalkie_big_nohaplotig	exon	75722367	75722557	100	+	.	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 1970 2160 +
Chr2	stalkie_big_nohaplotig	exon	75722610	75723011	100	+	.	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 2161 2562 +
Chr2	stalkie_big_nohaplotig	CDS	75707324	75707344	.	+	0	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	75708852	75708974	.	+	0	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 22 144 +
Chr2	stalkie_big_nohaplotig	CDS	75715090	75715188	.	+	0	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 145 243 +
Chr2	stalkie_big_nohaplotig	CDS	75715333	75715533	.	+	0	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 244 444 +
Chr2	stalkie_big_nohaplotig	CDS	75719291	75719402	.	+	0	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 445 556 +
Chr2	stalkie_big_nohaplotig	CDS	75719457	75719492	.	+	2	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 557 592 +
Chr2	stalkie_big_nohaplotig	CDS	75719555	75719925	.	+	2	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 593 963 +
Chr2	stalkie_big_nohaplotig	CDS	75721062	75721608	.	+	0	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 964 1510 +
Chr2	stalkie_big_nohaplotig	CDS	75721704	75721815	.	+	2	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 1511 1622 +
Chr2	stalkie_big_nohaplotig	CDS	75721877	75722022	.	+	1	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 1623 1768 +
Chr2	stalkie_big_nohaplotig	CDS	75722089	75722289	.	+	2	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 1769 1969 +
Chr2	stalkie_big_nohaplotig	CDS	75722367	75722557	.	+	2	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 1970 2160 +
Chr2	stalkie_big_nohaplotig	CDS	75722610	75723011	.	+	0	Parent=FBgn0262483.1.mrna1;Target=FBgn0262483.1 2161 2562 +
Chr2	gffcl	locus	74843685	74844613	.	-	.	ID=RLOC_00018444;geneIDs=comp148837_c0_seq1.path2;transcripts=comp148837_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	74843685	74844613	.	-	.	ID=comp148837_c0_seq1.mrna2;geneID=comp148837_c0_seq1.path2;Name=comp148837_c0_seq1;Dir=sensecoverage=97.4;identity=95.6;matches=742;mismatches=7;indels=27;unknowns=0;locus=RLOC_00018444
Chr2	stalkie_big_nohaplotig	exon	74843685	74844334	94	-	.	Parent=comp148837_c0_seq1.mrna2;Target=comp148837_c0_seq1 144 772 +
Chr2	stalkie_big_nohaplotig	exon	74844407	74844459	100	-	.	Parent=comp148837_c0_seq1.mrna2;Target=comp148837_c0_seq1 91 143 +
Chr2	stalkie_big_nohaplotig	exon	74844544	74844613	100	-	.	Parent=comp148837_c0_seq1.mrna2;Target=comp148837_c0_seq1 21 90 +
Chr2	stalkie_big_nohaplotig	CDS	74844043	74844334	.	-	1	Parent=comp148837_c0_seq1.mrna2;Target=comp148837_c0_seq1 144 414 +
Chr2	stalkie_big_nohaplotig	CDS	74844407	74844459	.	-	0	Parent=comp148837_c0_seq1.mrna2;Target=comp148837_c0_seq1 91 143 +
Chr2	stalkie_big_nohaplotig	CDS	74844544	74844612	.	-	0	Parent=comp148837_c0_seq1.mrna2;Target=comp148837_c0_seq1 22 90 +
Chr2	gffcl	locus	74924743	74926328	.	+	.	ID=RLOC_00018445;geneIDs=FBgn0038722.1.path1;transcripts=FBgn0038722.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	74924743	74926328	.	+	.	ID=FBgn0038722.1.mrna1;geneID=FBgn0038722.1.path1;Name=FBgn0038722.1;Dir=sensecoverage=100.0;identity=99.9;matches=1531;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018445
Chr2	stalkie_big_nohaplotig	exon	74924743	74925549	99	+	.	Parent=FBgn0038722.1.mrna1;Target=FBgn0038722.1 1 807 +
Chr2	stalkie_big_nohaplotig	exon	74925603	74926328	100	+	.	Parent=FBgn0038722.1.mrna1;Target=FBgn0038722.1 808 1533 +
Chr2	stalkie_big_nohaplotig	CDS	74924743	74925549	.	+	0	Parent=FBgn0038722.1.mrna1;Target=FBgn0038722.1 1 807 +
Chr2	stalkie_big_nohaplotig	CDS	74925603	74926328	.	+	0	Parent=FBgn0038722.1.mrna1;Target=FBgn0038722.1 808 1533 +
Chr2	gffcl	locus	74926557	74927918	.	-	.	ID=RLOC_00018446;geneIDs=FBgn0038723.1.path1;transcripts=FBgn0038723.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	74926557	74927918	.	-	.	ID=FBgn0038723.1.mrna1;geneID=FBgn0038723.1.path1;Name=FBgn0038723.1;Dir=sensecoverage=100.0;identity=100.0;matches=1134;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018446
Chr2	stalkie_big_nohaplotig	exon	74926557	74926715	100	-	.	Parent=FBgn0038723.1.mrna1;Target=FBgn0038723.1 976 1134 +
Chr2	stalkie_big_nohaplotig	exon	74926783	74927340	100	-	.	Parent=FBgn0038723.1.mrna1;Target=FBgn0038723.1 418 975 +
Chr2	stalkie_big_nohaplotig	exon	74927400	74927707	100	-	.	Parent=FBgn0038723.1.mrna1;Target=FBgn0038723.1 110 417 +
Chr2	stalkie_big_nohaplotig	exon	74927810	74927918	100	-	.	Parent=FBgn0038723.1.mrna1;Target=FBgn0038723.1 1 109 +
Chr2	stalkie_big_nohaplotig	CDS	74926557	74926715	.	-	0	Parent=FBgn0038723.1.mrna1;Target=FBgn0038723.1 976 1134 +
Chr2	stalkie_big_nohaplotig	CDS	74926783	74927340	.	-	0	Parent=FBgn0038723.1.mrna1;Target=FBgn0038723.1 418 975 +
Chr2	stalkie_big_nohaplotig	CDS	74927400	74927707	.	-	2	Parent=FBgn0038723.1.mrna1;Target=FBgn0038723.1 110 417 +
Chr2	stalkie_big_nohaplotig	CDS	74927810	74927918	.	-	0	Parent=FBgn0038723.1.mrna1;Target=FBgn0038723.1 1 109 +
Chr2	gffcl	locus	74970949	74974311	.	-	.	ID=RLOC_00018447;geneIDs=FBgn0038725.1.path1;transcripts=FBgn0038725.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	74970949	74974311	.	-	.	ID=FBgn0038725.1.mrna1;geneID=FBgn0038725.1.path1;Name=FBgn0038725.1;Dir=sensecoverage=100.0;identity=100.0;matches=2940;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018447
Chr2	stalkie_big_nohaplotig	exon	74970949	74971193	100	-	.	Parent=FBgn0038725.1.mrna1;Target=FBgn0038725.1 2696 2940 +
Chr2	stalkie_big_nohaplotig	exon	74971248	74971836	100	-	.	Parent=FBgn0038725.1.mrna1;Target=FBgn0038725.1 2107 2695 +
Chr2	stalkie_big_nohaplotig	exon	74971903	74972219	100	-	.	Parent=FBgn0038725.1.mrna1;Target=FBgn0038725.1 1790 2106 +
Chr2	stalkie_big_nohaplotig	exon	74972273	74972398	100	-	.	Parent=FBgn0038725.1.mrna1;Target=FBgn0038725.1 1664 1789 +
Chr2	stalkie_big_nohaplotig	exon	74972475	74973333	100	-	.	Parent=FBgn0038725.1.mrna1;Target=FBgn0038725.1 805 1663 +
Chr2	stalkie_big_nohaplotig	exon	74973397	74973614	100	-	.	Parent=FBgn0038725.1.mrna1;Target=FBgn0038725.1 587 804 +
Chr2	stalkie_big_nohaplotig	exon	74973674	74974115	100	-	.	Parent=FBgn0038725.1.mrna1;Target=FBgn0038725.1 145 586 +
Chr2	stalkie_big_nohaplotig	exon	74974168	74974311	100	-	.	Parent=FBgn0038725.1.mrna1;Target=FBgn0038725.1 1 144 +
Chr2	stalkie_big_nohaplotig	CDS	74970949	74971193	.	-	2	Parent=FBgn0038725.1.mrna1;Target=FBgn0038725.1 2696 2940 +
Chr2	stalkie_big_nohaplotig	CDS	74971248	74971836	.	-	0	Parent=FBgn0038725.1.mrna1;Target=FBgn0038725.1 2107 2695 +
Chr2	stalkie_big_nohaplotig	CDS	74971903	74972219	.	-	2	Parent=FBgn0038725.1.mrna1;Target=FBgn0038725.1 1790 2106 +
Chr2	stalkie_big_nohaplotig	CDS	74972273	74972398	.	-	2	Parent=FBgn0038725.1.mrna1;Target=FBgn0038725.1 1664 1789 +
Chr2	stalkie_big_nohaplotig	CDS	74972475	74973333	.	-	0	Parent=FBgn0038725.1.mrna1;Target=FBgn0038725.1 805 1663 +
Chr2	stalkie_big_nohaplotig	CDS	74973397	74973614	.	-	2	Parent=FBgn0038725.1.mrna1;Target=FBgn0038725.1 587 804 +
Chr2	stalkie_big_nohaplotig	CDS	74973674	74974115	.	-	0	Parent=FBgn0038725.1.mrna1;Target=FBgn0038725.1 145 586 +
Chr2	stalkie_big_nohaplotig	CDS	74974168	74974311	.	-	0	Parent=FBgn0038725.1.mrna1;Target=FBgn0038725.1 1 144 +
Chr2	gffcl	locus	75046525	75046842	.	-	.	ID=RLOC_00018448;geneIDs=Dp_FBgn0250085.path7;transcripts=Dp_FBgn0250085.mrna7
Chr2	stalkie_big_nohaplotig	mRNA	75046525	75046842	.	-	.	ID=Dp_FBgn0250085.mrna7;geneID=Dp_FBgn0250085.path7;Name=Dp_FBgn0250085;Dir=indeterminatecoverage=100.0;identity=99.7;matches=317;mismatches=1;indels=0;unknowns=0;Target=Dp_FBgn0250085 318 1 .;locus=RLOC_00018448
Chr2	stalkie_big_nohaplotig	exon	75046525	75046842	99	-	.	Parent=Dp_FBgn0250085.mrna7
Chr2	stalkie_big_nohaplotig	CDS	75046525	75046842	.	-	0	Parent=Dp_FBgn0250085.mrna7
Chr2	gffcl	locus	75128753	75129790	.	+	.	ID=RLOC_00018451;geneIDs=FBgn0039857.1.path1,comp148531_c1_seq1.path1;transcripts=FBgn0039857.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75128753	75129790	.	+	.	ID=FBgn0039857.1.mrna1;geneID=FBgn0039857.1.path1;Name=FBgn0039857.1;Dir=sensecoverage=100.0;identity=99.6;matches=814;mismatches=0;indels=3;unknowns=0;locus=RLOC_00018451
Chr2	stalkie_big_nohaplotig	exon	75128753	75128892	99	+	.	Parent=FBgn0039857.1.mrna1;Target=FBgn0039857.1 1 141 +
Chr2	stalkie_big_nohaplotig	exon	75129116	75129790	99	+	.	Parent=FBgn0039857.1.mrna1;Target=FBgn0039857.1 142 816 +
Chr2	stalkie_big_nohaplotig	CDS	75128782	75128892	.	+	0	Parent=FBgn0039857.1.mrna1;Target=FBgn0039857.1 30 141 +
Chr2	stalkie_big_nohaplotig	CDS	75129116	75129147	.	+	0	Parent=FBgn0039857.1.mrna1;Target=FBgn0039857.1 142 173 +
Chr2	gffcl	locus	75130778	75132359	.	-	.	ID=RLOC_00018452;geneIDs=FBgn0039854.1.path1;transcripts=FBgn0039854.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75130778	75132359	.	-	.	ID=FBgn0039854.1.mrna1;geneID=FBgn0039854.1.path1;Name=FBgn0039854.1;Dir=sensecoverage=100.0;identity=100.0;matches=1374;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018452
Chr2	stalkie_big_nohaplotig	exon	75130778	75131715	100	-	.	Parent=FBgn0039854.1.mrna1;Target=FBgn0039854.1 437 1374 +
Chr2	stalkie_big_nohaplotig	exon	75131772	75132014	100	-	.	Parent=FBgn0039854.1.mrna1;Target=FBgn0039854.1 194 436 +
Chr2	stalkie_big_nohaplotig	exon	75132074	75132138	100	-	.	Parent=FBgn0039854.1.mrna1;Target=FBgn0039854.1 129 193 +
Chr2	stalkie_big_nohaplotig	exon	75132232	75132359	100	-	.	Parent=FBgn0039854.1.mrna1;Target=FBgn0039854.1 1 128 +
Chr2	stalkie_big_nohaplotig	CDS	75130778	75131715	.	-	2	Parent=FBgn0039854.1.mrna1;Target=FBgn0039854.1 437 1374 +
Chr2	stalkie_big_nohaplotig	CDS	75131772	75132014	.	-	2	Parent=FBgn0039854.1.mrna1;Target=FBgn0039854.1 194 436 +
Chr2	stalkie_big_nohaplotig	CDS	75132074	75132138	.	-	1	Parent=FBgn0039854.1.mrna1;Target=FBgn0039854.1 129 193 +
Chr2	stalkie_big_nohaplotig	CDS	75132232	75132359	.	-	0	Parent=FBgn0039854.1.mrna1;Target=FBgn0039854.1 1 128 +
Chr2	gffcl	locus	75163458	75165878	.	.	.	ID=RLOC_00018453;geneIDs=FBgn0039875.1.path1,comp427726_c0_seq1.path1;transcripts=FBgn0039875.1.mrna1,comp427726_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75163458	75165878	.	-	.	ID=FBgn0039875.1.mrna1;geneID=FBgn0039875.1.path1;Name=FBgn0039875.1;Dir=sensecoverage=100.0;identity=100.0;matches=1950;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018453
Chr2	stalkie_big_nohaplotig	exon	75163458	75163937	100	-	.	Parent=FBgn0039875.1.mrna1;Target=FBgn0039875.1 1471 1950 +
Chr2	stalkie_big_nohaplotig	exon	75163993	75164210	100	-	.	Parent=FBgn0039875.1.mrna1;Target=FBgn0039875.1 1253 1470 +
Chr2	stalkie_big_nohaplotig	exon	75164273	75164568	100	-	.	Parent=FBgn0039875.1.mrna1;Target=FBgn0039875.1 957 1252 +
Chr2	stalkie_big_nohaplotig	exon	75164628	75165133	100	-	.	Parent=FBgn0039875.1.mrna1;Target=FBgn0039875.1 451 956 +
Chr2	stalkie_big_nohaplotig	exon	75165288	75165476	100	-	.	Parent=FBgn0039875.1.mrna1;Target=FBgn0039875.1 262 450 +
Chr2	stalkie_big_nohaplotig	exon	75165559	75165615	100	-	.	Parent=FBgn0039875.1.mrna1;Target=FBgn0039875.1 205 261 +
Chr2	stalkie_big_nohaplotig	exon	75165675	75165878	100	-	.	Parent=FBgn0039875.1.mrna1;Target=FBgn0039875.1 1 204 +
Chr2	stalkie_big_nohaplotig	CDS	75163458	75163937	.	-	0	Parent=FBgn0039875.1.mrna1;Target=FBgn0039875.1 1471 1950 +
Chr2	stalkie_big_nohaplotig	CDS	75163993	75164210	.	-	2	Parent=FBgn0039875.1.mrna1;Target=FBgn0039875.1 1253 1470 +
Chr2	stalkie_big_nohaplotig	CDS	75164273	75164568	.	-	1	Parent=FBgn0039875.1.mrna1;Target=FBgn0039875.1 957 1252 +
Chr2	stalkie_big_nohaplotig	CDS	75164628	75165133	.	-	0	Parent=FBgn0039875.1.mrna1;Target=FBgn0039875.1 451 956 +
Chr2	stalkie_big_nohaplotig	CDS	75165288	75165476	.	-	0	Parent=FBgn0039875.1.mrna1;Target=FBgn0039875.1 262 450 +
Chr2	stalkie_big_nohaplotig	CDS	75165559	75165615	.	-	0	Parent=FBgn0039875.1.mrna1;Target=FBgn0039875.1 205 261 +
Chr2	stalkie_big_nohaplotig	CDS	75165675	75165878	.	-	0	Parent=FBgn0039875.1.mrna1;Target=FBgn0039875.1 1 204 +
Chr2	stalkie_big_nohaplotig	mRNA	75165110	75165310	.	+	.	ID=comp427726_c0_seq1.mrna1;geneID=comp427726_c0_seq1.path1;Name=comp427726_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=201;mismatches=0;indels=0;unknowns=0;Target=comp427726_c0_seq1 201 1 .;CDS_Target=comp427726_c0_seq1 66 1 .;locus=RLOC_00018453
Chr2	stalkie_big_nohaplotig	exon	75165110	75165310	100	+	.	Parent=comp427726_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	75165110	75165175	.	+	0	Parent=comp427726_c0_seq1.mrna1
Chr2	gffcl	locus	75187790	75188520	.	-	.	ID=RLOC_00018454;geneIDs=comp155983_c0_seq1.path9;transcripts=comp155983_c0_seq1.mrna9
Chr2	stalkie_big_nohaplotig	mRNA	75187790	75188520	.	-	.	ID=comp155983_c0_seq1.mrna9;geneID=comp155983_c0_seq1.path9;Name=comp155983_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=722;mismatches=9;indels=0;unknowns=0;Target=comp155983_c0_seq1 731 1 .;CDS_Target=comp155983_c0_seq1 105 1 .;locus=RLOC_00018454
Chr2	stalkie_big_nohaplotig	exon	75187790	75188520	98	-	.	Parent=comp155983_c0_seq1.mrna9
Chr2	stalkie_big_nohaplotig	CDS	75188416	75188520	.	-	0	Parent=comp155983_c0_seq1.mrna9
Chr2	gffcl	locus	75195621	75196351	.	+	.	ID=RLOC_00018455;geneIDs=comp155983_c0_seq1.path10;transcripts=comp155983_c0_seq1.mrna10
Chr2	stalkie_big_nohaplotig	mRNA	75195621	75196351	.	+	.	ID=comp155983_c0_seq1.mrna10;geneID=comp155983_c0_seq1.path10;Name=comp155983_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=722;mismatches=9;indels=0;unknowns=0;Target=comp155983_c0_seq1 731 1 .;CDS_Target=comp155983_c0_seq1 105 1 .;locus=RLOC_00018455
Chr2	stalkie_big_nohaplotig	exon	75195621	75196351	98	+	.	Parent=comp155983_c0_seq1.mrna10
Chr2	stalkie_big_nohaplotig	CDS	75195621	75195725	.	+	0	Parent=comp155983_c0_seq1.mrna10
Chr2	gffcl	locus	75200854	75202964	.	+	.	ID=RLOC_00018456;geneIDs=FBgn0039877.1.path1;transcripts=FBgn0039877.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75200854	75202964	.	+	.	ID=FBgn0039877.1.mrna1;geneID=FBgn0039877.1.path1;Name=FBgn0039877.1;Dir=sensecoverage=99.4;identity=100.0;matches=1802;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018456
Chr2	stalkie_big_nohaplotig	exon	75200854	75200897	100	+	.	Parent=FBgn0039877.1.mrna1;Target=FBgn0039877.1 1 44 +
Chr2	stalkie_big_nohaplotig	exon	75200995	75201772	100	+	.	Parent=FBgn0039877.1.mrna1;Target=FBgn0039877.1 45 822 +
Chr2	stalkie_big_nohaplotig	exon	75201828	75202132	100	+	.	Parent=FBgn0039877.1.mrna1;Target=FBgn0039877.1 823 1127 +
Chr2	stalkie_big_nohaplotig	exon	75202184	75202385	100	+	.	Parent=FBgn0039877.1.mrna1;Target=FBgn0039877.1 1128 1329 +
Chr2	stalkie_big_nohaplotig	exon	75202436	75202724	100	+	.	Parent=FBgn0039877.1.mrna1;Target=FBgn0039877.1 1330 1618 +
Chr2	stalkie_big_nohaplotig	exon	75202781	75202964	100	+	.	Parent=FBgn0039877.1.mrna1;Target=FBgn0039877.1 1619 1802 +
Chr2	stalkie_big_nohaplotig	CDS	75200854	75200897	.	+	0	Parent=FBgn0039877.1.mrna1;Target=FBgn0039877.1 1 44 +
Chr2	stalkie_big_nohaplotig	CDS	75200995	75201772	.	+	1	Parent=FBgn0039877.1.mrna1;Target=FBgn0039877.1 45 822 +
Chr2	stalkie_big_nohaplotig	CDS	75201828	75202132	.	+	0	Parent=FBgn0039877.1.mrna1;Target=FBgn0039877.1 823 1127 +
Chr2	stalkie_big_nohaplotig	CDS	75202184	75202385	.	+	1	Parent=FBgn0039877.1.mrna1;Target=FBgn0039877.1 1128 1329 +
Chr2	stalkie_big_nohaplotig	CDS	75202436	75202724	.	+	0	Parent=FBgn0039877.1.mrna1;Target=FBgn0039877.1 1330 1618 +
Chr2	stalkie_big_nohaplotig	CDS	75202781	75202962	.	+	2	Parent=FBgn0039877.1.mrna1;Target=FBgn0039877.1 1619 1800 +
Chr2	gffcl	locus	75205715	75223573	.	-	.	ID=RLOC_00018457;geneIDs=FBgn0005632.1.path1;transcripts=FBgn0005632.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75205715	75223573	.	-	.	ID=FBgn0005632.1.mrna1;geneID=FBgn0005632.1.path1;Name=FBgn0005632.1;Dir=sensecoverage=100.0;identity=100.0;matches=8046;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018457
Chr2	stalkie_big_nohaplotig	exon	75205715	75205864	100	-	.	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 7897 8046 +
Chr2	stalkie_big_nohaplotig	exon	75213120	75213431	100	-	.	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 7585 7896 +
Chr2	stalkie_big_nohaplotig	exon	75214610	75215186	100	-	.	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 7008 7584 +
Chr2	stalkie_big_nohaplotig	exon	75215351	75215610	100	-	.	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 6748 7007 +
Chr2	stalkie_big_nohaplotig	exon	75215667	75216018	100	-	.	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 6396 6747 +
Chr2	stalkie_big_nohaplotig	exon	75216083	75216192	100	-	.	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 6286 6395 +
Chr2	stalkie_big_nohaplotig	exon	75216263	75216374	100	-	.	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 6174 6285 +
Chr2	stalkie_big_nohaplotig	exon	75216430	75216738	100	-	.	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 5865 6173 +
Chr2	stalkie_big_nohaplotig	exon	75216797	75216947	100	-	.	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 5714 5864 +
Chr2	stalkie_big_nohaplotig	exon	75217011	75217164	100	-	.	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 5560 5713 +
Chr2	stalkie_big_nohaplotig	exon	75217258	75217573	100	-	.	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 5244 5559 +
Chr2	stalkie_big_nohaplotig	exon	75217632	75218001	100	-	.	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 4874 5243 +
Chr2	stalkie_big_nohaplotig	exon	75218056	75219421	100	-	.	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 3508 4873 +
Chr2	stalkie_big_nohaplotig	exon	75219486	75220778	100	-	.	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 2215 3507 +
Chr2	stalkie_big_nohaplotig	exon	75220848	75221447	100	-	.	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 1615 2214 +
Chr2	stalkie_big_nohaplotig	exon	75221539	75221796	100	-	.	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 1357 1614 +
Chr2	stalkie_big_nohaplotig	exon	75221895	75222877	100	-	.	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 374 1356 +
Chr2	stalkie_big_nohaplotig	exon	75222947	75223095	100	-	.	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 225 373 +
Chr2	stalkie_big_nohaplotig	exon	75223350	75223573	100	-	.	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 1 224 +
Chr2	stalkie_big_nohaplotig	CDS	75205715	75205864	.	-	0	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 7897 8046 +
Chr2	stalkie_big_nohaplotig	CDS	75213120	75213431	.	-	0	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 7585 7896 +
Chr2	stalkie_big_nohaplotig	CDS	75214610	75215186	.	-	1	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 7008 7584 +
Chr2	stalkie_big_nohaplotig	CDS	75215351	75215610	.	-	0	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 6748 7007 +
Chr2	stalkie_big_nohaplotig	CDS	75215667	75216018	.	-	1	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 6396 6747 +
Chr2	stalkie_big_nohaplotig	CDS	75216083	75216192	.	-	0	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 6286 6395 +
Chr2	stalkie_big_nohaplotig	CDS	75216263	75216374	.	-	1	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 6174 6285 +
Chr2	stalkie_big_nohaplotig	CDS	75216430	75216738	.	-	1	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 5865 6173 +
Chr2	stalkie_big_nohaplotig	CDS	75216797	75216947	.	-	2	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 5714 5864 +
Chr2	stalkie_big_nohaplotig	CDS	75217011	75217164	.	-	0	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 5560 5713 +
Chr2	stalkie_big_nohaplotig	CDS	75217258	75217573	.	-	1	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 5244 5559 +
Chr2	stalkie_big_nohaplotig	CDS	75217632	75218001	.	-	2	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 4874 5243 +
Chr2	stalkie_big_nohaplotig	CDS	75218056	75219421	.	-	0	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 3508 4873 +
Chr2	stalkie_big_nohaplotig	CDS	75219486	75220778	.	-	0	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 2215 3507 +
Chr2	stalkie_big_nohaplotig	CDS	75220848	75221447	.	-	0	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 1615 2214 +
Chr2	stalkie_big_nohaplotig	CDS	75221539	75221796	.	-	0	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 1357 1614 +
Chr2	stalkie_big_nohaplotig	CDS	75221895	75222877	.	-	2	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 374 1356 +
Chr2	stalkie_big_nohaplotig	CDS	75222947	75223095	.	-	1	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 225 373 +
Chr2	stalkie_big_nohaplotig	CDS	75223350	75223573	.	-	0	Parent=FBgn0005632.1.mrna1;Target=FBgn0005632.1 1 224 +
Chr2	gffcl	locus	75226969	75229389	.	.	.	ID=RLOC_00018458;geneIDs=FBgn0039875.1.path2,comp427726_c0_seq1.path2;transcripts=FBgn0039875.1.mrna2,comp427726_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	75226969	75229389	.	+	.	ID=FBgn0039875.1.mrna2;geneID=FBgn0039875.1.path2;Name=FBgn0039875.1;Dir=sensecoverage=100.0;identity=100.0;matches=1950;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018458
Chr2	stalkie_big_nohaplotig	exon	75226969	75227172	100	+	.	Parent=FBgn0039875.1.mrna2;Target=FBgn0039875.1 1 204 +
Chr2	stalkie_big_nohaplotig	exon	75227232	75227288	100	+	.	Parent=FBgn0039875.1.mrna2;Target=FBgn0039875.1 205 261 +
Chr2	stalkie_big_nohaplotig	exon	75227371	75227559	100	+	.	Parent=FBgn0039875.1.mrna2;Target=FBgn0039875.1 262 450 +
Chr2	stalkie_big_nohaplotig	exon	75227714	75228219	100	+	.	Parent=FBgn0039875.1.mrna2;Target=FBgn0039875.1 451 956 +
Chr2	stalkie_big_nohaplotig	exon	75228279	75228574	100	+	.	Parent=FBgn0039875.1.mrna2;Target=FBgn0039875.1 957 1252 +
Chr2	stalkie_big_nohaplotig	exon	75228637	75228854	100	+	.	Parent=FBgn0039875.1.mrna2;Target=FBgn0039875.1 1253 1470 +
Chr2	stalkie_big_nohaplotig	exon	75228910	75229389	100	+	.	Parent=FBgn0039875.1.mrna2;Target=FBgn0039875.1 1471 1950 +
Chr2	stalkie_big_nohaplotig	CDS	75226969	75227172	.	+	0	Parent=FBgn0039875.1.mrna2;Target=FBgn0039875.1 1 204 +
Chr2	stalkie_big_nohaplotig	CDS	75227232	75227288	.	+	0	Parent=FBgn0039875.1.mrna2;Target=FBgn0039875.1 205 261 +
Chr2	stalkie_big_nohaplotig	CDS	75227371	75227559	.	+	0	Parent=FBgn0039875.1.mrna2;Target=FBgn0039875.1 262 450 +
Chr2	stalkie_big_nohaplotig	CDS	75227714	75228219	.	+	0	Parent=FBgn0039875.1.mrna2;Target=FBgn0039875.1 451 956 +
Chr2	stalkie_big_nohaplotig	CDS	75228279	75228574	.	+	1	Parent=FBgn0039875.1.mrna2;Target=FBgn0039875.1 957 1252 +
Chr2	stalkie_big_nohaplotig	CDS	75228637	75228854	.	+	2	Parent=FBgn0039875.1.mrna2;Target=FBgn0039875.1 1253 1470 +
Chr2	stalkie_big_nohaplotig	CDS	75228910	75229389	.	+	0	Parent=FBgn0039875.1.mrna2;Target=FBgn0039875.1 1471 1950 +
Chr2	stalkie_big_nohaplotig	mRNA	75227537	75227737	.	-	.	ID=comp427726_c0_seq1.mrna2;geneID=comp427726_c0_seq1.path2;Name=comp427726_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=201;mismatches=0;indels=0;unknowns=0;Target=comp427726_c0_seq1 201 1 .;CDS_Target=comp427726_c0_seq1 66 1 .;locus=RLOC_00018458
Chr2	stalkie_big_nohaplotig	exon	75227537	75227737	100	-	.	Parent=comp427726_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	75227672	75227737	.	-	0	Parent=comp427726_c0_seq1.mrna2
Chr2	gffcl	locus	75308775	75310874	.	+	.	ID=RLOC_00018459;geneIDs=FBgn0000239.1.path1;transcripts=FBgn0000239.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75308775	75310874	.	+	.	ID=FBgn0000239.1.mrna1;geneID=FBgn0000239.1.path1;Name=FBgn0000239.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2100;mismatches=0;indels=0;unknowns=0;Target=FBgn0000239.1 2100 1 .;locus=RLOC_00018459
Chr2	stalkie_big_nohaplotig	exon	75308775	75310874	100	+	.	Parent=FBgn0000239.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	75308775	75310874	.	+	0	Parent=FBgn0000239.1.mrna1
Chr2	gffcl	locus	75311591	75313689	.	+	.	ID=RLOC_00018460;geneIDs=FBgn0260386.1.path1;transcripts=FBgn0260386.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75311591	75313689	.	+	.	ID=FBgn0260386.1.mrna1;geneID=FBgn0260386.1.path1;Name=FBgn0260386.1;Dir=sensecoverage=95.4;identity=100.0;matches=1562;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018460
Chr2	stalkie_big_nohaplotig	exon	75311591	75311713	100	+	.	Parent=FBgn0260386.1.mrna1;Target=FBgn0260386.1 77 199 +
Chr2	stalkie_big_nohaplotig	exon	75311964	75312094	100	+	.	Parent=FBgn0260386.1.mrna1;Target=FBgn0260386.1 200 330 +
Chr2	stalkie_big_nohaplotig	exon	75312166	75312447	100	+	.	Parent=FBgn0260386.1.mrna1;Target=FBgn0260386.1 331 612 +
Chr2	stalkie_big_nohaplotig	exon	75312510	75312992	100	+	.	Parent=FBgn0260386.1.mrna1;Target=FBgn0260386.1 613 1095 +
Chr2	stalkie_big_nohaplotig	exon	75313063	75313218	100	+	.	Parent=FBgn0260386.1.mrna1;Target=FBgn0260386.1 1096 1251 +
Chr2	stalkie_big_nohaplotig	exon	75313303	75313689	100	+	.	Parent=FBgn0260386.1.mrna1;Target=FBgn0260386.1 1252 1638 +
Chr2	stalkie_big_nohaplotig	CDS	75311593	75311713	.	+	0	Parent=FBgn0260386.1.mrna1;Target=FBgn0260386.1 79 199 +
Chr2	stalkie_big_nohaplotig	CDS	75311964	75312094	.	+	2	Parent=FBgn0260386.1.mrna1;Target=FBgn0260386.1 200 330 +
Chr2	stalkie_big_nohaplotig	CDS	75312166	75312447	.	+	0	Parent=FBgn0260386.1.mrna1;Target=FBgn0260386.1 331 612 +
Chr2	stalkie_big_nohaplotig	CDS	75312510	75312992	.	+	0	Parent=FBgn0260386.1.mrna1;Target=FBgn0260386.1 613 1095 +
Chr2	stalkie_big_nohaplotig	CDS	75313063	75313218	.	+	0	Parent=FBgn0260386.1.mrna1;Target=FBgn0260386.1 1096 1251 +
Chr2	stalkie_big_nohaplotig	CDS	75313303	75313689	.	+	0	Parent=FBgn0260386.1.mrna1;Target=FBgn0260386.1 1252 1638 +
Chr2	stalkie_big_nohaplotig	mRNA	75350405	75350841	.	-	.	ID=comp170024_c0_seq1.mrna1;geneID=comp170024_c0_seq1.path1;Name=comp170024_c0_seq1;Dir=indeterminatecoverage=95.8;identity=100.0;matches=437;mismatches=0;indels=0;unknowns=0;Target=comp170024_c0_seq1 456 20 .;CDS_Target=comp170024_c0_seq1 347 273 .;locus=RLOC_00018461
Chr2	stalkie_big_nohaplotig	exon	75350405	75350841	100	-	.	Parent=comp170024_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	75350514	75350588	.	-	0	Parent=comp170024_c0_seq1.mrna1
Chr2	gffcl	locus	75337135	75337616	.	+	.	ID=RLOC_00018462;geneIDs=comp152975_c0_seq1.path9;transcripts=comp152975_c0_seq1.mrna9
Chr2	stalkie_big_nohaplotig	mRNA	75337135	75337616	.	+	.	ID=comp152975_c0_seq1.mrna9;geneID=comp152975_c0_seq1.path9;Name=comp152975_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=477;mismatches=5;indels=0;unknowns=0;Target=comp152975_c0_seq1 482 1 .;CDS_Target=comp152975_c0_seq1 185 63 .;locus=RLOC_00018462
Chr2	stalkie_big_nohaplotig	exon	75337135	75337616	98	+	.	Parent=comp152975_c0_seq1.mrna9
Chr2	stalkie_big_nohaplotig	CDS	75337197	75337319	.	+	0	Parent=comp152975_c0_seq1.mrna9
Chr2	gffcl	locus	75342276	75343100	.	+	.	ID=RLOC_00018463;geneIDs=FBgn0037570.1.path1;transcripts=FBgn0037570.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75342276	75343100	.	+	.	ID=FBgn0037570.1.mrna1;geneID=FBgn0037570.1.path1;Name=FBgn0037570.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=824;mismatches=1;indels=0;unknowns=0;Target=FBgn0037570.1 825 1 .;locus=RLOC_00018463
Chr2	stalkie_big_nohaplotig	exon	75342276	75343100	99	+	.	Parent=FBgn0037570.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	75342276	75343100	.	+	0	Parent=FBgn0037570.1.mrna1
Chr2	gffcl	locus	75388210	75392579	.	+	.	ID=RLOC_00018464;geneIDs=comp163985_c0_seq1.path1;transcripts=comp163985_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75388210	75392579	.	+	.	ID=comp163985_c0_seq1.mrna1;geneID=comp163985_c0_seq1.path1;Name=comp163985_c0_seq1;Dir=indeterminatecoverage=97.6;identity=98.0;matches=4253;mismatches=72;indels=17;unknowns=0;Target=comp163985_c0_seq1 679 629 .;locus=RLOC_00018464
Chr2	stalkie_big_nohaplotig	exon	75388210	75392359	98	+	.	Parent=comp163985_c0_seq1.mrna1;Target=comp163985_c0_seq1 4148 1 .
Chr2	stalkie_big_nohaplotig	exon	75392391	75392579	82	+	.	Parent=comp163985_c0_seq1.mrna1;Target=comp163985_c0_seq1 4346 4167 .
Chr2	stalkie_big_nohaplotig	CDS	75388838	75388888	.	+	0	Parent=comp163985_c0_seq1.mrna1
Chr2	gffcl	locus	75447283	75447501	.	-	.	ID=RLOC_00018466;geneIDs=comp564456_c0_seq1.path1;transcripts=comp564456_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75447283	75447501	.	-	.	ID=comp564456_c0_seq1.mrna1;geneID=comp564456_c0_seq1.path1;Name=comp564456_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=219;mismatches=0;indels=0;unknowns=0;Target=comp564456_c0_seq1 219 1 .;CDS_Target=comp564456_c0_seq1 205 53 .;locus=RLOC_00018466
Chr2	stalkie_big_nohaplotig	exon	75447283	75447501	100	-	.	Parent=comp564456_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	75447297	75447449	.	-	0	Parent=comp564456_c0_seq1.mrna1
Chr2	gffcl	locus	75452467	75457045	.	+	.	ID=RLOC_00018467;geneIDs=FBgn0039617.1.path1;transcripts=FBgn0039617.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75452467	75457045	.	+	.	ID=FBgn0039617.1.mrna1;geneID=FBgn0039617.1.path1;Name=FBgn0039617.1;Dir=sensecoverage=100.0;identity=100.0;matches=1275;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018467
Chr2	stalkie_big_nohaplotig	exon	75452467	75452569	100	+	.	Parent=FBgn0039617.1.mrna1;Target=FBgn0039617.1 1 103 +
Chr2	stalkie_big_nohaplotig	exon	75452633	75452751	100	+	.	Parent=FBgn0039617.1.mrna1;Target=FBgn0039617.1 104 222 +
Chr2	stalkie_big_nohaplotig	exon	75453644	75453851	100	+	.	Parent=FBgn0039617.1.mrna1;Target=FBgn0039617.1 223 430 +
Chr2	stalkie_big_nohaplotig	exon	75453920	75454093	100	+	.	Parent=FBgn0039617.1.mrna1;Target=FBgn0039617.1 431 604 +
Chr2	stalkie_big_nohaplotig	exon	75454152	75454280	100	+	.	Parent=FBgn0039617.1.mrna1;Target=FBgn0039617.1 605 733 +
Chr2	stalkie_big_nohaplotig	exon	75456242	75456321	100	+	.	Parent=FBgn0039617.1.mrna1;Target=FBgn0039617.1 734 813 +
Chr2	stalkie_big_nohaplotig	exon	75456381	75456499	100	+	.	Parent=FBgn0039617.1.mrna1;Target=FBgn0039617.1 814 932 +
Chr2	stalkie_big_nohaplotig	exon	75456569	75456717	100	+	.	Parent=FBgn0039617.1.mrna1;Target=FBgn0039617.1 933 1081 +
Chr2	stalkie_big_nohaplotig	exon	75456777	75456836	100	+	.	Parent=FBgn0039617.1.mrna1;Target=FBgn0039617.1 1082 1141 +
Chr2	stalkie_big_nohaplotig	exon	75456912	75457045	100	+	.	Parent=FBgn0039617.1.mrna1;Target=FBgn0039617.1 1142 1275 +
Chr2	stalkie_big_nohaplotig	CDS	75452467	75452569	.	+	0	Parent=FBgn0039617.1.mrna1;Target=FBgn0039617.1 1 103 +
Chr2	stalkie_big_nohaplotig	CDS	75452633	75452751	.	+	2	Parent=FBgn0039617.1.mrna1;Target=FBgn0039617.1 104 222 +
Chr2	stalkie_big_nohaplotig	CDS	75453644	75453851	.	+	0	Parent=FBgn0039617.1.mrna1;Target=FBgn0039617.1 223 430 +
Chr2	stalkie_big_nohaplotig	CDS	75453920	75454093	.	+	2	Parent=FBgn0039617.1.mrna1;Target=FBgn0039617.1 431 604 +
Chr2	stalkie_big_nohaplotig	CDS	75454152	75454280	.	+	2	Parent=FBgn0039617.1.mrna1;Target=FBgn0039617.1 605 733 +
Chr2	stalkie_big_nohaplotig	CDS	75456242	75456321	.	+	2	Parent=FBgn0039617.1.mrna1;Target=FBgn0039617.1 734 813 +
Chr2	stalkie_big_nohaplotig	CDS	75456381	75456499	.	+	0	Parent=FBgn0039617.1.mrna1;Target=FBgn0039617.1 814 932 +
Chr2	stalkie_big_nohaplotig	CDS	75456569	75456717	.	+	1	Parent=FBgn0039617.1.mrna1;Target=FBgn0039617.1 933 1081 +
Chr2	stalkie_big_nohaplotig	CDS	75456777	75456836	.	+	2	Parent=FBgn0039617.1.mrna1;Target=FBgn0039617.1 1082 1141 +
Chr2	stalkie_big_nohaplotig	CDS	75456912	75457045	.	+	2	Parent=FBgn0039617.1.mrna1;Target=FBgn0039617.1 1142 1275 +
Chr2	gffcl	locus	75472441	75476237	.	-	.	ID=RLOC_00018469;geneIDs=FBgn0039620.1.path1;transcripts=FBgn0039620.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75472441	75476237	.	-	.	ID=FBgn0039620.1.mrna1;geneID=FBgn0039620.1.path1;Name=FBgn0039620.1;Dir=sensecoverage=100.0;identity=99.7;matches=1543;mismatches=5;indels=0;unknowns=0;locus=RLOC_00018469
Chr2	stalkie_big_nohaplotig	exon	75472441	75472528	100	-	.	Parent=FBgn0039620.1.mrna1;Target=FBgn0039620.1 1461 1548 +
Chr2	stalkie_big_nohaplotig	exon	75472607	75472864	99	-	.	Parent=FBgn0039620.1.mrna1;Target=FBgn0039620.1 1203 1460 +
Chr2	stalkie_big_nohaplotig	exon	75472927	75473166	99	-	.	Parent=FBgn0039620.1.mrna1;Target=FBgn0039620.1 963 1202 +
Chr2	stalkie_big_nohaplotig	exon	75473239	75473320	100	-	.	Parent=FBgn0039620.1.mrna1;Target=FBgn0039620.1 881 962 +
Chr2	stalkie_big_nohaplotig	exon	75473382	75473492	100	-	.	Parent=FBgn0039620.1.mrna1;Target=FBgn0039620.1 770 880 +
Chr2	stalkie_big_nohaplotig	exon	75473556	75473811	100	-	.	Parent=FBgn0039620.1.mrna1;Target=FBgn0039620.1 514 769 +
Chr2	stalkie_big_nohaplotig	exon	75473949	75474197	100	-	.	Parent=FBgn0039620.1.mrna1;Target=FBgn0039620.1 265 513 +
Chr2	stalkie_big_nohaplotig	exon	75474808	75474920	100	-	.	Parent=FBgn0039620.1.mrna1;Target=FBgn0039620.1 152 264 +
Chr2	stalkie_big_nohaplotig	exon	75474986	75475060	100	-	.	Parent=FBgn0039620.1.mrna1;Target=FBgn0039620.1 77 151 +
Chr2	stalkie_big_nohaplotig	exon	75476162	75476237	97	-	.	Parent=FBgn0039620.1.mrna1;Target=FBgn0039620.1 1 76 +
Chr2	stalkie_big_nohaplotig	CDS	75472441	75472528	.	-	1	Parent=FBgn0039620.1.mrna1;Target=FBgn0039620.1 1461 1548 +
Chr2	stalkie_big_nohaplotig	CDS	75472607	75472864	.	-	1	Parent=FBgn0039620.1.mrna1;Target=FBgn0039620.1 1203 1460 +
Chr2	stalkie_big_nohaplotig	CDS	75472927	75473166	.	-	1	Parent=FBgn0039620.1.mrna1;Target=FBgn0039620.1 963 1202 +
Chr2	stalkie_big_nohaplotig	CDS	75473239	75473320	.	-	2	Parent=FBgn0039620.1.mrna1;Target=FBgn0039620.1 881 962 +
Chr2	stalkie_big_nohaplotig	CDS	75473382	75473492	.	-	2	Parent=FBgn0039620.1.mrna1;Target=FBgn0039620.1 770 880 +
Chr2	stalkie_big_nohaplotig	CDS	75473556	75473811	.	-	0	Parent=FBgn0039620.1.mrna1;Target=FBgn0039620.1 514 769 +
Chr2	stalkie_big_nohaplotig	CDS	75473949	75474197	.	-	0	Parent=FBgn0039620.1.mrna1;Target=FBgn0039620.1 265 513 +
Chr2	stalkie_big_nohaplotig	CDS	75474808	75474920	.	-	2	Parent=FBgn0039620.1.mrna1;Target=FBgn0039620.1 152 264 +
Chr2	stalkie_big_nohaplotig	CDS	75474986	75475060	.	-	2	Parent=FBgn0039620.1.mrna1;Target=FBgn0039620.1 77 151 +
Chr2	stalkie_big_nohaplotig	CDS	75476162	75476222	.	-	0	Parent=FBgn0039620.1.mrna1;Target=FBgn0039620.1 16 76 +
Chr2	gffcl	locus	75524829	75525971	.	-	.	ID=RLOC_00018471;geneIDs=FBgn0039625.1.path1;transcripts=FBgn0039625.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75524829	75525971	.	-	.	ID=FBgn0039625.1.mrna1;geneID=FBgn0039625.1.path1;Name=FBgn0039625.1;Dir=sensecoverage=100.0;identity=100.0;matches=1035;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018471
Chr2	stalkie_big_nohaplotig	exon	75524829	75525061	100	-	.	Parent=FBgn0039625.1.mrna1;Target=FBgn0039625.1 803 1035 +
Chr2	stalkie_big_nohaplotig	exon	75525118	75525564	100	-	.	Parent=FBgn0039625.1.mrna1;Target=FBgn0039625.1 356 802 +
Chr2	stalkie_big_nohaplotig	exon	75525617	75525971	100	-	.	Parent=FBgn0039625.1.mrna1;Target=FBgn0039625.1 1 355 +
Chr2	stalkie_big_nohaplotig	CDS	75524829	75525061	.	-	2	Parent=FBgn0039625.1.mrna1;Target=FBgn0039625.1 803 1035 +
Chr2	stalkie_big_nohaplotig	CDS	75525118	75525564	.	-	2	Parent=FBgn0039625.1.mrna1;Target=FBgn0039625.1 356 802 +
Chr2	stalkie_big_nohaplotig	CDS	75525617	75525971	.	-	0	Parent=FBgn0039625.1.mrna1;Target=FBgn0039625.1 1 355 +
Chr2	gffcl	locus	75527562	75528636	.	-	.	ID=RLOC_00018472;geneIDs=FBgn0039630.1.path1;transcripts=FBgn0039630.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75527562	75528636	.	-	.	ID=FBgn0039630.1.mrna1;geneID=FBgn0039630.1.path1;Name=FBgn0039630.1;Dir=sensecoverage=100.0;identity=99.8;matches=880;mismatches=1;indels=1;unknowns=0;locus=RLOC_00018472
Chr2	stalkie_big_nohaplotig	exon	75527562	75527981	99	-	.	Parent=FBgn0039630.1.mrna1;Target=FBgn0039630.1 462 882 +
Chr2	stalkie_big_nohaplotig	exon	75528118	75528388	100	-	.	Parent=FBgn0039630.1.mrna1;Target=FBgn0039630.1 191 461 +
Chr2	stalkie_big_nohaplotig	exon	75528447	75528636	99	-	.	Parent=FBgn0039630.1.mrna1;Target=FBgn0039630.1 1 190 +
Chr2	stalkie_big_nohaplotig	CDS	75527562	75527981	.	-	1	Parent=FBgn0039630.1.mrna1;Target=FBgn0039630.1 462 882 +
Chr2	stalkie_big_nohaplotig	CDS	75528118	75528388	.	-	2	Parent=FBgn0039630.1.mrna1;Target=FBgn0039630.1 191 461 +
Chr2	stalkie_big_nohaplotig	CDS	75528447	75528636	.	-	0	Parent=FBgn0039630.1.mrna1;Target=FBgn0039630.1 1 190 +
Chr2	gffcl	locus	75529116	75530298	.	-	.	ID=RLOC_00018473;geneIDs=FBgn0039627.1.path1;transcripts=FBgn0039627.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75529116	75530298	.	-	.	ID=FBgn0039627.1.mrna1;geneID=FBgn0039627.1.path1;Name=FBgn0039627.1;Dir=sensecoverage=100.0;identity=100.0;matches=927;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018473
Chr2	stalkie_big_nohaplotig	exon	75529116	75529262	100	-	.	Parent=FBgn0039627.1.mrna1;Target=FBgn0039627.1 781 927 +
Chr2	stalkie_big_nohaplotig	exon	75529460	75530175	100	-	.	Parent=FBgn0039627.1.mrna1;Target=FBgn0039627.1 65 780 +
Chr2	stalkie_big_nohaplotig	exon	75530235	75530298	100	-	.	Parent=FBgn0039627.1.mrna1;Target=FBgn0039627.1 1 64 +
Chr2	stalkie_big_nohaplotig	CDS	75529116	75529262	.	-	0	Parent=FBgn0039627.1.mrna1;Target=FBgn0039627.1 781 927 +
Chr2	stalkie_big_nohaplotig	CDS	75529460	75530175	.	-	2	Parent=FBgn0039627.1.mrna1;Target=FBgn0039627.1 65 780 +
Chr2	stalkie_big_nohaplotig	CDS	75530235	75530298	.	-	0	Parent=FBgn0039627.1.mrna1;Target=FBgn0039627.1 1 64 +
Chr2	gffcl	locus	75539724	75541348	.	-	.	ID=RLOC_00018474;geneIDs=comp156650_c2_seq1.path1;transcripts=comp156650_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75539724	75541348	.	-	.	ID=comp156650_c2_seq1.mrna1;geneID=comp156650_c2_seq1.path1;Name=comp156650_c2_seq1;Dir=sensecoverage=88.4;identity=98.9;matches=527;mismatches=6;indels=0;unknowns=0;locus=RLOC_00018474
Chr2	stalkie_big_nohaplotig	exon	75539724	75540153	98	-	.	Parent=comp156650_c2_seq1.mrna1;Target=comp156650_c2_seq1 104 533 +
Chr2	stalkie_big_nohaplotig	exon	75541246	75541348	100	-	.	Parent=comp156650_c2_seq1.mrna1;Target=comp156650_c2_seq1 1 103 +
Chr2	stalkie_big_nohaplotig	CDS	75539756	75540153	.	-	2	Parent=comp156650_c2_seq1.mrna1;Target=comp156650_c2_seq1 104 501 +
Chr2	stalkie_big_nohaplotig	CDS	75541246	75541348	.	-	0	Parent=comp156650_c2_seq1.mrna1;Target=comp156650_c2_seq1 1 103 +
Chr2	gffcl	locus	75556789	75558572	.	-	.	ID=RLOC_00018476;geneIDs=comp163857_c1_seq1.path1;transcripts=comp163857_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75556789	75558572	.	-	.	ID=comp163857_c1_seq1.mrna1;geneID=comp163857_c1_seq1.path1;Name=comp163857_c1_seq1;Dir=indeterminatecoverage=94.4;identity=97.2;matches=1383;mismatches=35;indels=5;unknowns=0;Target=comp163857_c1_seq1 1412 1278 .;locus=RLOC_00018476
Chr2	stalkie_big_nohaplotig	exon	75556789	75556990	83	-	.	Parent=comp163857_c1_seq1.mrna1;Target=comp163857_c1_seq1 1419 1219 .
Chr2	stalkie_big_nohaplotig	exon	75557353	75558572	99	-	.	Parent=comp163857_c1_seq1.mrna1;Target=comp163857_c1_seq1 1218 1 .
Chr2	stalkie_big_nohaplotig	CDS	75556796	75556931	.	-	0	Parent=comp163857_c1_seq1.mrna1
Chr2	gffcl	locus	75582919	75583457	.	+	.	ID=RLOC_00018477;geneIDs=comp155506_c2_seq1.path1;transcripts=comp155506_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75582919	75583457	.	+	.	ID=comp155506_c2_seq1.mrna1;geneID=comp155506_c2_seq1.path1;Name=comp155506_c2_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=531;mismatches=8;indels=0;unknowns=0;Target=comp155506_c2_seq1 539 1 .;CDS_Target=comp155506_c2_seq1 44 3 .;locus=RLOC_00018477
Chr2	stalkie_big_nohaplotig	exon	75582919	75583457	98	+	.	Parent=comp155506_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	75582921	75582962	.	+	0	Parent=comp155506_c2_seq1.mrna1
Chr2	gffcl	locus	75586417	75588939	.	+	.	ID=RLOC_00018478;geneIDs=FBgn0027873.1.path1;transcripts=FBgn0027873.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75586417	75588939	.	+	.	ID=FBgn0027873.1.mrna1;geneID=FBgn0027873.1.path1;Name=FBgn0027873.1;Dir=sensecoverage=100.0;identity=100.0;matches=2244;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018478
Chr2	stalkie_big_nohaplotig	exon	75586417	75586571	100	+	.	Parent=FBgn0027873.1.mrna1;Target=FBgn0027873.1 1 155 +
Chr2	stalkie_big_nohaplotig	exon	75586631	75586896	100	+	.	Parent=FBgn0027873.1.mrna1;Target=FBgn0027873.1 156 421 +
Chr2	stalkie_big_nohaplotig	exon	75586955	75587612	100	+	.	Parent=FBgn0027873.1.mrna1;Target=FBgn0027873.1 422 1079 +
Chr2	stalkie_big_nohaplotig	exon	75587661	75588124	100	+	.	Parent=FBgn0027873.1.mrna1;Target=FBgn0027873.1 1080 1543 +
Chr2	stalkie_big_nohaplotig	exon	75588187	75588431	100	+	.	Parent=FBgn0027873.1.mrna1;Target=FBgn0027873.1 1544 1788 +
Chr2	stalkie_big_nohaplotig	exon	75588484	75588939	100	+	.	Parent=FBgn0027873.1.mrna1;Target=FBgn0027873.1 1789 2244 +
Chr2	stalkie_big_nohaplotig	CDS	75586417	75586571	.	+	0	Parent=FBgn0027873.1.mrna1;Target=FBgn0027873.1 1 155 +
Chr2	stalkie_big_nohaplotig	CDS	75586631	75586896	.	+	1	Parent=FBgn0027873.1.mrna1;Target=FBgn0027873.1 156 421 +
Chr2	stalkie_big_nohaplotig	CDS	75586955	75587612	.	+	2	Parent=FBgn0027873.1.mrna1;Target=FBgn0027873.1 422 1079 +
Chr2	stalkie_big_nohaplotig	CDS	75587661	75588124	.	+	1	Parent=FBgn0027873.1.mrna1;Target=FBgn0027873.1 1080 1543 +
Chr2	stalkie_big_nohaplotig	CDS	75588187	75588431	.	+	2	Parent=FBgn0027873.1.mrna1;Target=FBgn0027873.1 1544 1788 +
Chr2	stalkie_big_nohaplotig	CDS	75588484	75588939	.	+	0	Parent=FBgn0027873.1.mrna1;Target=FBgn0027873.1 1789 2244 +
Chr2	gffcl	locus	75588985	75590866	.	-	.	ID=RLOC_00018479;geneIDs=FBgn0039626.1.path2;transcripts=FBgn0039626.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	75588985	75590866	.	-	.	ID=FBgn0039626.1.mrna2;geneID=FBgn0039626.1.path2;Name=FBgn0039626.1;Dir=sensecoverage=100.0;identity=100.0;matches=1629;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018479
Chr2	stalkie_big_nohaplotig	exon	75588985	75589341	100	-	.	Parent=FBgn0039626.1.mrna2;Target=FBgn0039626.1 1273 1629 +
Chr2	stalkie_big_nohaplotig	exon	75589396	75589647	100	-	.	Parent=FBgn0039626.1.mrna2;Target=FBgn0039626.1 1021 1272 +
Chr2	stalkie_big_nohaplotig	exon	75589712	75589895	100	-	.	Parent=FBgn0039626.1.mrna2;Target=FBgn0039626.1 837 1020 +
Chr2	stalkie_big_nohaplotig	exon	75589946	75590174	100	-	.	Parent=FBgn0039626.1.mrna2;Target=FBgn0039626.1 608 836 +
Chr2	stalkie_big_nohaplotig	exon	75590260	75590866	100	-	.	Parent=FBgn0039626.1.mrna2;Target=FBgn0039626.1 1 607 +
Chr2	stalkie_big_nohaplotig	CDS	75588985	75589341	.	-	0	Parent=FBgn0039626.1.mrna2;Target=FBgn0039626.1 1273 1629 +
Chr2	stalkie_big_nohaplotig	CDS	75589396	75589647	.	-	0	Parent=FBgn0039626.1.mrna2;Target=FBgn0039626.1 1021 1272 +
Chr2	stalkie_big_nohaplotig	CDS	75589712	75589895	.	-	1	Parent=FBgn0039626.1.mrna2;Target=FBgn0039626.1 837 1020 +
Chr2	stalkie_big_nohaplotig	CDS	75589946	75590174	.	-	2	Parent=FBgn0039626.1.mrna2;Target=FBgn0039626.1 608 836 +
Chr2	stalkie_big_nohaplotig	CDS	75590260	75590866	.	-	0	Parent=FBgn0039626.1.mrna2;Target=FBgn0039626.1 1 607 +
Chr2	gffcl	locus	75694100	75696616	.	+	.	ID=RLOC_00018480;geneIDs=FBgn0039631.1.path1;transcripts=FBgn0039631.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75694100	75696616	.	+	.	ID=FBgn0039631.1.mrna1;geneID=FBgn0039631.1.path1;Name=FBgn0039631.1;Dir=sensecoverage=100.0;identity=100.0;matches=2405;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018480
Chr2	stalkie_big_nohaplotig	exon	75694100	75694243	100	+	.	Parent=FBgn0039631.1.mrna1;Target=FBgn0039631.1 1 144 +
Chr2	stalkie_big_nohaplotig	exon	75694356	75696616	100	+	.	Parent=FBgn0039631.1.mrna1;Target=FBgn0039631.1 145 2405 +
Chr2	stalkie_big_nohaplotig	CDS	75694100	75694243	.	+	0	Parent=FBgn0039631.1.mrna1;Target=FBgn0039631.1 1 144 +
Chr2	stalkie_big_nohaplotig	CDS	75694356	75696614	.	+	0	Parent=FBgn0039631.1.mrna1;Target=FBgn0039631.1 145 2403 +
Chr2	gffcl	locus	75697117	75700406	.	-	.	ID=RLOC_00018481;geneIDs=FBgn0039632.1.path1;transcripts=FBgn0039632.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75697117	75700406	.	-	.	ID=FBgn0039632.1.mrna1;geneID=FBgn0039632.1.path1;Name=FBgn0039632.1;Dir=sensecoverage=100.0;identity=100.0;matches=2388;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018481
Chr2	stalkie_big_nohaplotig	exon	75697117	75697251	100	-	.	Parent=FBgn0039632.1.mrna1;Target=FBgn0039632.1 2254 2388 +
Chr2	stalkie_big_nohaplotig	exon	75697309	75697458	100	-	.	Parent=FBgn0039632.1.mrna1;Target=FBgn0039632.1 2104 2253 +
Chr2	stalkie_big_nohaplotig	exon	75697535	75697710	100	-	.	Parent=FBgn0039632.1.mrna1;Target=FBgn0039632.1 1928 2103 +
Chr2	stalkie_big_nohaplotig	exon	75697772	75698129	100	-	.	Parent=FBgn0039632.1.mrna1;Target=FBgn0039632.1 1570 1927 +
Chr2	stalkie_big_nohaplotig	exon	75698182	75698302	100	-	.	Parent=FBgn0039632.1.mrna1;Target=FBgn0039632.1 1449 1569 +
Chr2	stalkie_big_nohaplotig	exon	75698882	75699114	100	-	.	Parent=FBgn0039632.1.mrna1;Target=FBgn0039632.1 1216 1448 +
Chr2	stalkie_big_nohaplotig	exon	75699192	75700406	100	-	.	Parent=FBgn0039632.1.mrna1;Target=FBgn0039632.1 1 1215 +
Chr2	stalkie_big_nohaplotig	CDS	75697117	75697251	.	-	0	Parent=FBgn0039632.1.mrna1;Target=FBgn0039632.1 2254 2388 +
Chr2	stalkie_big_nohaplotig	CDS	75697309	75697458	.	-	0	Parent=FBgn0039632.1.mrna1;Target=FBgn0039632.1 2104 2253 +
Chr2	stalkie_big_nohaplotig	CDS	75697535	75697710	.	-	2	Parent=FBgn0039632.1.mrna1;Target=FBgn0039632.1 1928 2103 +
Chr2	stalkie_big_nohaplotig	CDS	75697772	75698129	.	-	0	Parent=FBgn0039632.1.mrna1;Target=FBgn0039632.1 1570 1927 +
Chr2	stalkie_big_nohaplotig	CDS	75698182	75698302	.	-	1	Parent=FBgn0039632.1.mrna1;Target=FBgn0039632.1 1449 1569 +
Chr2	stalkie_big_nohaplotig	CDS	75698882	75699114	.	-	0	Parent=FBgn0039632.1.mrna1;Target=FBgn0039632.1 1216 1448 +
Chr2	stalkie_big_nohaplotig	CDS	75699192	75700406	.	-	0	Parent=FBgn0039632.1.mrna1;Target=FBgn0039632.1 1 1215 +
Chr2	gffcl	locus	75701050	75702197	.	+	.	ID=RLOC_00018482;geneIDs=FBgn0038331.1.path1;transcripts=FBgn0038331.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75701050	75702197	.	+	.	ID=FBgn0038331.1.mrna1;geneID=FBgn0038331.1.path1;Name=FBgn0038331.1;Dir=sensecoverage=100.0;identity=100.0;matches=660;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018482
Chr2	stalkie_big_nohaplotig	exon	75701050	75701151	100	+	.	Parent=FBgn0038331.1.mrna1;Target=FBgn0038331.1 1 102 +
Chr2	stalkie_big_nohaplotig	exon	75701210	75701387	100	+	.	Parent=FBgn0038331.1.mrna1;Target=FBgn0038331.1 103 280 +
Chr2	stalkie_big_nohaplotig	exon	75701450	75701582	100	+	.	Parent=FBgn0038331.1.mrna1;Target=FBgn0038331.1 281 413 +
Chr2	stalkie_big_nohaplotig	exon	75701634	75701798	100	+	.	Parent=FBgn0038331.1.mrna1;Target=FBgn0038331.1 414 578 +
Chr2	stalkie_big_nohaplotig	exon	75702116	75702197	100	+	.	Parent=FBgn0038331.1.mrna1;Target=FBgn0038331.1 579 660 +
Chr2	stalkie_big_nohaplotig	CDS	75701050	75701151	.	+	0	Parent=FBgn0038331.1.mrna1;Target=FBgn0038331.1 1 102 +
Chr2	stalkie_big_nohaplotig	CDS	75701210	75701387	.	+	0	Parent=FBgn0038331.1.mrna1;Target=FBgn0038331.1 103 280 +
Chr2	stalkie_big_nohaplotig	CDS	75701450	75701582	.	+	2	Parent=FBgn0038331.1.mrna1;Target=FBgn0038331.1 281 413 +
Chr2	stalkie_big_nohaplotig	CDS	75701634	75701798	.	+	1	Parent=FBgn0038331.1.mrna1;Target=FBgn0038331.1 414 578 +
Chr2	stalkie_big_nohaplotig	CDS	75702116	75702197	.	+	1	Parent=FBgn0038331.1.mrna1;Target=FBgn0038331.1 579 660 +
Chr2	gffcl	locus	75767851	75801464	.	-	.	ID=RLOC_00018483;geneIDs=FBgn0262483.1.path2,comp135575_c0_seq1.path1,comp163100_c1_seq1.path1;transcripts=comp163100_c1_seq1.mrna1,comp135575_c0_seq1.mrna1,FBgn0262483.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	75767851	75801464	.	-	.	ID=comp163100_c1_seq1.mrna1;geneID=comp163100_c1_seq1.path1;Name=comp163100_c1_seq1;Dir=indeterminatecoverage=73.5;identity=97.7;matches=1898;mismatches=30;indels=15;unknowns=0;Target=comp163100_c1_seq1 924 694 .;locus=RLOC_00018483
Chr2	stalkie_big_nohaplotig	exon	75767851	75767852	100	-	.	Parent=comp163100_c1_seq1.mrna1;Target=comp163100_c1_seq1 1994 1993 .
Chr2	stalkie_big_nohaplotig	exon	75775125	75775127	100	-	.	Parent=comp163100_c1_seq1.mrna1;Target=comp163100_c1_seq1 1992 1990 .
Chr2	stalkie_big_nohaplotig	exon	75778733	75778735	100	-	.	Parent=comp163100_c1_seq1.mrna1;Target=comp163100_c1_seq1 1989 1987 .
Chr2	stalkie_big_nohaplotig	exon	75779954	75779963	100	-	.	Parent=comp163100_c1_seq1.mrna1;Target=comp163100_c1_seq1 1986 1977 .
Chr2	stalkie_big_nohaplotig	exon	75781132	75781134	100	-	.	Parent=comp163100_c1_seq1.mrna1;Target=comp163100_c1_seq1 1976 1974 .
Chr2	stalkie_big_nohaplotig	exon	75781284	75781290	100	-	.	Parent=comp163100_c1_seq1.mrna1;Target=comp163100_c1_seq1 1973 1967 .
Chr2	stalkie_big_nohaplotig	exon	75790751	75790759	88	-	.	Parent=comp163100_c1_seq1.mrna1;Target=comp163100_c1_seq1 1905 1897 .
Chr2	stalkie_big_nohaplotig	exon	75793386	75793396	90	-	.	Parent=comp163100_c1_seq1.mrna1;Target=comp163100_c1_seq1 1896 1886 .
Chr2	stalkie_big_nohaplotig	exon	75799575	75801464	97	-	.	Parent=comp163100_c1_seq1.mrna1;Target=comp163100_c1_seq1 1885 3 .
Chr2	stalkie_big_nohaplotig	CDS	75800544	75800774	.	-	0	Parent=comp163100_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75779644	75781323	.	-	.	ID=comp135575_c0_seq1.mrna1;geneID=comp135575_c0_seq1.path1;Name=comp135575_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.3;matches=1673;mismatches=2;indels=10;unknowns=0;Target=comp135575_c0_seq1 1693 14 .;CDS_Target=comp135575_c0_seq1 1587 1420 .;locus=RLOC_00018483
Chr2	stalkie_big_nohaplotig	exon	75779644	75781323	99	-	.	Parent=comp135575_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	75779750	75779917	.	-	0	Parent=comp135575_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75782437	75795360	.	-	.	ID=FBgn0262483.1.mrna2;geneID=FBgn0262483.1.path2;Name=FBgn0262483.1;Dir=sensecoverage=41.8;identity=100.0;matches=1842;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018483
Chr2	stalkie_big_nohaplotig	exon	75782437	75782490	100	-	.	Parent=FBgn0262483.1.mrna2;Target=FBgn0262483.1 4351 4404 +
Chr2	stalkie_big_nohaplotig	exon	75786423	75786490	100	-	.	Parent=FBgn0262483.1.mrna2;Target=FBgn0262483.1 4283 4350 +
Chr2	stalkie_big_nohaplotig	exon	75790458	75790752	100	-	.	Parent=FBgn0262483.1.mrna2;Target=FBgn0262483.1 3988 4282 +
Chr2	stalkie_big_nohaplotig	exon	75791022	75791315	100	-	.	Parent=FBgn0262483.1.mrna2;Target=FBgn0262483.1 3694 3987 +
Chr2	stalkie_big_nohaplotig	exon	75791888	75792442	100	-	.	Parent=FBgn0262483.1.mrna2;Target=FBgn0262483.1 3139 3693 +
Chr2	stalkie_big_nohaplotig	exon	75793731	75793823	100	-	.	Parent=FBgn0262483.1.mrna2;Target=FBgn0262483.1 3046 3138 +
Chr2	stalkie_big_nohaplotig	exon	75794820	75795040	100	-	.	Parent=FBgn0262483.1.mrna2;Target=FBgn0262483.1 2825 3045 +
Chr2	stalkie_big_nohaplotig	exon	75795099	75795360	100	-	.	Parent=FBgn0262483.1.mrna2;Target=FBgn0262483.1 2563 2824 +
Chr2	stalkie_big_nohaplotig	CDS	75782437	75782490	.	-	0	Parent=FBgn0262483.1.mrna2;Target=FBgn0262483.1 4351 4404 +
Chr2	stalkie_big_nohaplotig	CDS	75786423	75786490	.	-	2	Parent=FBgn0262483.1.mrna2;Target=FBgn0262483.1 4283 4350 +
Chr2	stalkie_big_nohaplotig	CDS	75790458	75790752	.	-	0	Parent=FBgn0262483.1.mrna2;Target=FBgn0262483.1 3988 4282 +
Chr2	stalkie_big_nohaplotig	CDS	75791022	75791315	.	-	0	Parent=FBgn0262483.1.mrna2;Target=FBgn0262483.1 3694 3987 +
Chr2	stalkie_big_nohaplotig	CDS	75791888	75792442	.	-	0	Parent=FBgn0262483.1.mrna2;Target=FBgn0262483.1 3139 3693 +
Chr2	stalkie_big_nohaplotig	CDS	75793731	75793823	.	-	0	Parent=FBgn0262483.1.mrna2;Target=FBgn0262483.1 3046 3138 +
Chr2	stalkie_big_nohaplotig	CDS	75794820	75795040	.	-	2	Parent=FBgn0262483.1.mrna2;Target=FBgn0262483.1 2825 3045 +
Chr2	stalkie_big_nohaplotig	CDS	75795099	75795360	.	-	0	Parent=FBgn0262483.1.mrna2;Target=FBgn0262483.1 2563 2824 +
Chr2	gffcl	locus	75769025	75769678	.	+	.	ID=RLOC_00018484;geneIDs=comp138081_c1_seq1.path1;transcripts=comp138081_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75769025	75769678	.	+	.	ID=comp138081_c1_seq1.mrna1;geneID=comp138081_c1_seq1.path1;Name=comp138081_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=654;mismatches=0;indels=0;unknowns=0;Target=comp138081_c1_seq1 654 1 .;CDS_Target=comp138081_c1_seq1 280 2 .;locus=RLOC_00018484
Chr2	stalkie_big_nohaplotig	exon	75769025	75769678	100	+	.	Parent=comp138081_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	75769026	75769304	.	+	0	Parent=comp138081_c1_seq1.mrna1
Chr2	gffcl	locus	75771077	75772487	.	+	.	ID=RLOC_00018485;geneIDs=FBgn0038337.path1;transcripts=FBgn0038337.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75771077	75772487	.	+	.	ID=FBgn0038337.mrna1;geneID=FBgn0038337.path1;Name=FBgn0038337;Dir=sensecoverage=100.0;identity=99.9;matches=1112;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018485
Chr2	stalkie_big_nohaplotig	exon	75771077	75771218	100	+	.	Parent=FBgn0038337.mrna1;Target=FBgn0038337 1 142 +
Chr2	stalkie_big_nohaplotig	exon	75771292	75771564	100	+	.	Parent=FBgn0038337.mrna1;Target=FBgn0038337 143 415 +
Chr2	stalkie_big_nohaplotig	exon	75771643	75771813	100	+	.	Parent=FBgn0038337.mrna1;Target=FBgn0038337 416 586 +
Chr2	stalkie_big_nohaplotig	exon	75771892	75772094	100	+	.	Parent=FBgn0038337.mrna1;Target=FBgn0038337 587 789 +
Chr2	stalkie_big_nohaplotig	exon	75772164	75772487	99	+	.	Parent=FBgn0038337.mrna1;Target=FBgn0038337 790 1113 +
Chr2	stalkie_big_nohaplotig	CDS	75771077	75771218	.	+	0	Parent=FBgn0038337.mrna1;Target=FBgn0038337 1 142 +
Chr2	stalkie_big_nohaplotig	CDS	75771292	75771564	.	+	2	Parent=FBgn0038337.mrna1;Target=FBgn0038337 143 415 +
Chr2	stalkie_big_nohaplotig	CDS	75771643	75771813	.	+	2	Parent=FBgn0038337.mrna1;Target=FBgn0038337 416 586 +
Chr2	stalkie_big_nohaplotig	CDS	75771892	75772094	.	+	2	Parent=FBgn0038337.mrna1;Target=FBgn0038337 587 789 +
Chr2	stalkie_big_nohaplotig	CDS	75772164	75772487	.	+	0	Parent=FBgn0038337.mrna1;Target=FBgn0038337 790 1113 +
Chr2	gffcl	locus	75778297	75779520	.	-	.	ID=RLOC_00018486;geneIDs=comp150260_c0_seq1.path1;transcripts=comp150260_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75778297	75779520	.	-	.	ID=comp150260_c0_seq1.mrna1;geneID=comp150260_c0_seq1.path1;Name=comp150260_c0_seq1;Dir=sensecoverage=98.4;identity=97.1;matches=1008;mismatches=7;indels=23;unknowns=0;Target=comp150260_c0_seq1 17 118 +;locus=RLOC_00018486
Chr2	stalkie_big_nohaplotig	exon	75778297	75778702	92	-	.	Parent=comp150260_c0_seq1.mrna1;Target=comp150260_c0_seq1 648 1030 +
Chr2	stalkie_big_nohaplotig	exon	75778889	75779520	100	-	.	Parent=comp150260_c0_seq1.mrna1;Target=comp150260_c0_seq1 16 647 +
Chr2	stalkie_big_nohaplotig	CDS	75779418	75779519	.	-	0	Parent=comp150260_c0_seq1.mrna1
Chr2	gffcl	locus	75825583	75831719	.	+	.	ID=RLOC_00018487;geneIDs=FBgn0041188.1.path1;transcripts=FBgn0041188.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75825583	75831719	.	+	.	ID=FBgn0041188.1.mrna1;geneID=FBgn0041188.1.path1;Name=FBgn0041188.1;Dir=sensecoverage=100.0;identity=100.0;matches=3174;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018487
Chr2	stalkie_big_nohaplotig	exon	75825583	75825662	100	+	.	Parent=FBgn0041188.1.mrna1;Target=FBgn0041188.1 1 80 +
Chr2	stalkie_big_nohaplotig	exon	75826485	75826843	100	+	.	Parent=FBgn0041188.1.mrna1;Target=FBgn0041188.1 81 439 +
Chr2	stalkie_big_nohaplotig	exon	75826902	75827859	100	+	.	Parent=FBgn0041188.1.mrna1;Target=FBgn0041188.1 440 1397 +
Chr2	stalkie_big_nohaplotig	exon	75827930	75828089	100	+	.	Parent=FBgn0041188.1.mrna1;Target=FBgn0041188.1 1398 1557 +
Chr2	stalkie_big_nohaplotig	exon	75828147	75829323	100	+	.	Parent=FBgn0041188.1.mrna1;Target=FBgn0041188.1 1558 2734 +
Chr2	stalkie_big_nohaplotig	exon	75829407	75829552	100	+	.	Parent=FBgn0041188.1.mrna1;Target=FBgn0041188.1 2735 2880 +
Chr2	stalkie_big_nohaplotig	exon	75831426	75831719	100	+	.	Parent=FBgn0041188.1.mrna1;Target=FBgn0041188.1 2881 3174 +
Chr2	stalkie_big_nohaplotig	CDS	75825583	75825662	.	+	0	Parent=FBgn0041188.1.mrna1;Target=FBgn0041188.1 1 80 +
Chr2	stalkie_big_nohaplotig	CDS	75826485	75826843	.	+	1	Parent=FBgn0041188.1.mrna1;Target=FBgn0041188.1 81 439 +
Chr2	stalkie_big_nohaplotig	CDS	75826902	75827859	.	+	2	Parent=FBgn0041188.1.mrna1;Target=FBgn0041188.1 440 1397 +
Chr2	stalkie_big_nohaplotig	CDS	75827930	75828089	.	+	1	Parent=FBgn0041188.1.mrna1;Target=FBgn0041188.1 1398 1557 +
Chr2	stalkie_big_nohaplotig	CDS	75828147	75829323	.	+	0	Parent=FBgn0041188.1.mrna1;Target=FBgn0041188.1 1558 2734 +
Chr2	stalkie_big_nohaplotig	CDS	75829407	75829552	.	+	2	Parent=FBgn0041188.1.mrna1;Target=FBgn0041188.1 2735 2880 +
Chr2	stalkie_big_nohaplotig	CDS	75831426	75831719	.	+	0	Parent=FBgn0041188.1.mrna1;Target=FBgn0041188.1 2881 3174 +
Chr2	gffcl	locus	75830976	75831172	.	-	.	ID=RLOC_00018488;geneIDs=comp155295_c1_seq1.path1;transcripts=comp155295_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75830976	75831172	.	-	.	ID=comp155295_c1_seq1.mrna1;geneID=comp155295_c1_seq1.path1;Name=comp155295_c1_seq1;Dir=indeterminatecoverage=12.3;identity=99.0;matches=195;mismatches=2;indels=0;unknowns=0;Target=comp155295_c1_seq1 197 1 .;CDS_Target=comp155295_c1_seq1 197 133 .;locus=RLOC_00018488
Chr2	stalkie_big_nohaplotig	exon	75830976	75831172	98	-	.	Parent=comp155295_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	75830976	75831040	.	-	0	Parent=comp155295_c1_seq1.mrna1
Chr2	gffcl	locus	75834210	75834866	.	+	.	ID=RLOC_00018489;geneIDs=comp145263_c0_seq1.path1;transcripts=comp145263_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75834210	75834866	.	+	.	ID=comp145263_c0_seq1.mrna1;geneID=comp145263_c0_seq1.path1;Name=comp145263_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=655;mismatches=2;indels=0;unknowns=0;Target=comp145263_c0_seq1 657 1 .;CDS_Target=comp145263_c0_seq1 271 125 .;locus=RLOC_00018489
Chr2	stalkie_big_nohaplotig	exon	75834210	75834866	99	+	.	Parent=comp145263_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	75834334	75834480	.	+	0	Parent=comp145263_c0_seq1.mrna1
Chr2	gffcl	locus	75841289	75843213	.	-	.	ID=RLOC_00018490;geneIDs=comp145678_c1_seq1.path1;transcripts=comp145678_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75841289	75843213	.	-	.	ID=comp145678_c1_seq1.mrna1;geneID=comp145678_c1_seq1.path1;Name=comp145678_c1_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=1493;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018490
Chr2	stalkie_big_nohaplotig	exon	75841289	75842383	100	-	.	Parent=comp145678_c1_seq1.mrna1;Target=comp145678_c1_seq1 1 1095 -
Chr2	stalkie_big_nohaplotig	exon	75842630	75842707	100	-	.	Parent=comp145678_c1_seq1.mrna1;Target=comp145678_c1_seq1 1096 1173 -
Chr2	stalkie_big_nohaplotig	exon	75842798	75842929	100	-	.	Parent=comp145678_c1_seq1.mrna1;Target=comp145678_c1_seq1 1174 1305 -
Chr2	stalkie_big_nohaplotig	exon	75843025	75843213	99	-	.	Parent=comp145678_c1_seq1.mrna1;Target=comp145678_c1_seq1 1306 1494 -
Chr2	stalkie_big_nohaplotig	CDS	75841289	75842383	.	-	0	Parent=comp145678_c1_seq1.mrna1;Target=comp145678_c1_seq1 1 1095 .
Chr2	stalkie_big_nohaplotig	CDS	75842630	75842707	.	-	0	Parent=comp145678_c1_seq1.mrna1;Target=comp145678_c1_seq1 1096 1173 .
Chr2	stalkie_big_nohaplotig	CDS	75842798	75842929	.	-	0	Parent=comp145678_c1_seq1.mrna1;Target=comp145678_c1_seq1 1174 1305 .
Chr2	stalkie_big_nohaplotig	CDS	75843025	75843213	.	-	0	Parent=comp145678_c1_seq1.mrna1;Target=comp145678_c1_seq1 1306 1494 .
Chr2	gffcl	locus	75843508	75853526	.	-	.	ID=RLOC_00018491;geneIDs=FBgn0038339.path1;transcripts=FBgn0038339.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75843508	75853526	.	-	.	ID=FBgn0038339.mrna1;geneID=FBgn0038339.path1;Name=FBgn0038339;Dir=sensecoverage=100.0;identity=99.9;matches=752;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018491
Chr2	stalkie_big_nohaplotig	exon	75843508	75843984	99	-	.	Parent=FBgn0038339.mrna1;Target=FBgn0038339 277 753 +
Chr2	stalkie_big_nohaplotig	exon	75844070	75844151	100	-	.	Parent=FBgn0038339.mrna1;Target=FBgn0038339 195 276 +
Chr2	stalkie_big_nohaplotig	exon	75844993	75845086	100	-	.	Parent=FBgn0038339.mrna1;Target=FBgn0038339 101 194 +
Chr2	stalkie_big_nohaplotig	exon	75853427	75853526	100	-	.	Parent=FBgn0038339.mrna1;Target=FBgn0038339 1 100 +
Chr2	stalkie_big_nohaplotig	CDS	75843508	75843984	.	-	0	Parent=FBgn0038339.mrna1;Target=FBgn0038339 277 753 +
Chr2	stalkie_big_nohaplotig	CDS	75844070	75844151	.	-	1	Parent=FBgn0038339.mrna1;Target=FBgn0038339 195 276 +
Chr2	stalkie_big_nohaplotig	CDS	75844993	75845086	.	-	2	Parent=FBgn0038339.mrna1;Target=FBgn0038339 101 194 +
Chr2	stalkie_big_nohaplotig	CDS	75853427	75853526	.	-	0	Parent=FBgn0038339.mrna1;Target=FBgn0038339 1 100 +
Chr2	gffcl	locus	75860245	75860770	.	+	.	ID=RLOC_00018492;geneIDs=comp117483_c0_seq1.path1;transcripts=comp117483_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75860245	75860770	.	+	.	ID=comp117483_c0_seq1.mrna1;geneID=comp117483_c0_seq1.path1;Name=comp117483_c0_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=526;mismatches=0;indels=0;unknowns=0;Target=comp117483_c0_seq1 528 3 .;CDS_Target=comp117483_c0_seq1 495 340 .;locus=RLOC_00018492
Chr2	stalkie_big_nohaplotig	exon	75860245	75860770	100	+	.	Parent=comp117483_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	75860582	75860737	.	+	0	Parent=comp117483_c0_seq1.mrna1
Chr2	gffcl	locus	75866920	75869583	.	+	.	ID=RLOC_00018493;geneIDs=FBgn0262743.2.path1;transcripts=FBgn0262743.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75866920	75869583	.	+	.	ID=FBgn0262743.2.mrna1;geneID=FBgn0262743.2.path1;Name=FBgn0262743.2;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2662;mismatches=2;indels=0;unknowns=0;Target=FBgn0262743.2 2664 1 .;locus=RLOC_00018493
Chr2	stalkie_big_nohaplotig	exon	75866920	75869583	99	+	.	Parent=FBgn0262743.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	75866920	75869583	.	+	0	Parent=FBgn0262743.2.mrna1
Chr2	gffcl	locus	75872933	75873404	.	-	.	ID=RLOC_00018494;geneIDs=comp117414_c0_seq1.path1;transcripts=comp117414_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75872933	75873404	.	-	.	ID=comp117414_c0_seq1.mrna1;geneID=comp117414_c0_seq1.path1;Name=comp117414_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=470;mismatches=2;indels=0;unknowns=0;Target=comp117414_c0_seq1 472 1 .;CDS_Target=comp117414_c0_seq1 319 203 .;locus=RLOC_00018494
Chr2	stalkie_big_nohaplotig	exon	75872933	75873404	99	-	.	Parent=comp117414_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	75873086	75873202	.	-	0	Parent=comp117414_c0_seq1.mrna1
Chr2	gffcl	locus	75877869	75878034	.	+	.	ID=RLOC_00018496;geneIDs=comp150575_c0_seq1.path1;transcripts=comp150575_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75877869	75878034	.	+	.	ID=comp150575_c0_seq1.mrna1;geneID=comp150575_c0_seq1.path1;Name=comp150575_c0_seq1;Dir=indeterminatecoverage=31.1;identity=99.4;matches=165;mismatches=1;indels=0;unknowns=0;Target=comp150575_c0_seq1 388 223 .;CDS_Target=comp150575_c0_seq1 331 287 .;locus=RLOC_00018496
Chr2	stalkie_big_nohaplotig	exon	75877869	75878034	99	+	.	Parent=comp150575_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	75877933	75877977	.	+	0	Parent=comp150575_c0_seq1.mrna1
Chr2	gffcl	locus	75884574	75885024	.	-	.	ID=RLOC_00018497;geneIDs=comp140221_c0_seq1.path1;transcripts=comp140221_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75884574	75885024	.	-	.	ID=comp140221_c0_seq1.mrna1;geneID=comp140221_c0_seq1.path1;Name=comp140221_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=447;mismatches=3;indels=1;unknowns=0;Target=comp140221_c0_seq1 450 1 .;CDS_Target=comp140221_c0_seq1 420 277 .;locus=RLOC_00018497
Chr2	stalkie_big_nohaplotig	exon	75884574	75885024	99	-	.	Parent=comp140221_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	75884604	75884747	.	-	0	Parent=comp140221_c0_seq1.mrna1
Chr2	gffcl	locus	75887168	75895054	.	-	.	ID=RLOC_00018498;geneIDs=FBgn0038341.1.path1;transcripts=FBgn0038341.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75887168	75895054	.	-	.	ID=FBgn0038341.1.mrna1;geneID=FBgn0038341.1.path1;Name=FBgn0038341.1;Dir=sensecoverage=90.6;identity=99.8;matches=4506;mismatches=9;indels=0;unknowns=0;locus=RLOC_00018498
Chr2	stalkie_big_nohaplotig	exon	75887168	75887260	98	-	.	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 4894 4986 +
Chr2	stalkie_big_nohaplotig	exon	75887329	75887943	100	-	.	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 4279 4893 +
Chr2	stalkie_big_nohaplotig	exon	75888026	75888388	100	-	.	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 3916 4278 +
Chr2	stalkie_big_nohaplotig	exon	75888459	75888635	98	-	.	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 3739 3915 +
Chr2	stalkie_big_nohaplotig	exon	75888696	75888860	100	-	.	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 3574 3738 +
Chr2	stalkie_big_nohaplotig	exon	75888929	75889130	100	-	.	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 3372 3573 +
Chr2	stalkie_big_nohaplotig	exon	75889203	75889483	100	-	.	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 3091 3371 +
Chr2	stalkie_big_nohaplotig	exon	75889560	75889786	100	-	.	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 2864 3090 +
Chr2	stalkie_big_nohaplotig	exon	75891067	75891198	100	-	.	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 2732 2863 +
Chr2	stalkie_big_nohaplotig	exon	75891337	75891516	100	-	.	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 2552 2731 +
Chr2	stalkie_big_nohaplotig	exon	75891573	75892138	99	-	.	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 1986 2551 +
Chr2	stalkie_big_nohaplotig	exon	75892260	75892412	99	-	.	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 1833 1985 +
Chr2	stalkie_big_nohaplotig	exon	75892479	75892628	100	-	.	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 1683 1832 +
Chr2	stalkie_big_nohaplotig	exon	75892705	75892792	100	-	.	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 1595 1682 +
Chr2	stalkie_big_nohaplotig	exon	75893460	75893868	100	-	.	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 1186 1594 +
Chr2	stalkie_big_nohaplotig	exon	75894113	75894244	100	-	.	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 1054 1185 +
Chr2	stalkie_big_nohaplotig	exon	75894324	75894478	99	-	.	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 899 1053 +
Chr2	stalkie_big_nohaplotig	exon	75894535	75894696	99	-	.	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 737 898 +
Chr2	stalkie_big_nohaplotig	exon	75894790	75895054	100	-	.	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 472 736 +
Chr2	stalkie_big_nohaplotig	CDS	75887168	75887260	.	-	0	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 4894 4986 +
Chr2	stalkie_big_nohaplotig	CDS	75887329	75887943	.	-	0	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 4279 4893 +
Chr2	stalkie_big_nohaplotig	CDS	75888026	75888388	.	-	0	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 3916 4278 +
Chr2	stalkie_big_nohaplotig	CDS	75888459	75888635	.	-	0	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 3739 3915 +
Chr2	stalkie_big_nohaplotig	CDS	75888696	75888860	.	-	0	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 3574 3738 +
Chr2	stalkie_big_nohaplotig	CDS	75888929	75889130	.	-	1	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 3372 3573 +
Chr2	stalkie_big_nohaplotig	CDS	75889203	75889483	.	-	0	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 3091 3371 +
Chr2	stalkie_big_nohaplotig	CDS	75889560	75889786	.	-	2	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 2864 3090 +
Chr2	stalkie_big_nohaplotig	CDS	75891067	75891198	.	-	2	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 2732 2863 +
Chr2	stalkie_big_nohaplotig	CDS	75891337	75891516	.	-	2	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 2552 2731 +
Chr2	stalkie_big_nohaplotig	CDS	75891573	75892138	.	-	1	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 1986 2551 +
Chr2	stalkie_big_nohaplotig	CDS	75892260	75892412	.	-	1	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 1833 1985 +
Chr2	stalkie_big_nohaplotig	CDS	75892479	75892628	.	-	1	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 1683 1832 +
Chr2	stalkie_big_nohaplotig	CDS	75892705	75892792	.	-	2	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 1595 1682 +
Chr2	stalkie_big_nohaplotig	CDS	75893460	75893868	.	-	0	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 1186 1594 +
Chr2	stalkie_big_nohaplotig	CDS	75894113	75894244	.	-	0	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 1054 1185 +
Chr2	stalkie_big_nohaplotig	CDS	75894324	75894478	.	-	2	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 899 1053 +
Chr2	stalkie_big_nohaplotig	CDS	75894535	75894696	.	-	2	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 737 898 +
Chr2	stalkie_big_nohaplotig	CDS	75894790	75895054	.	-	0	Parent=FBgn0038341.1.mrna1;Target=FBgn0038341.1 472 736 +
Chr2	gffcl	locus	75933593	75933978	.	+	.	ID=RLOC_00018500;geneIDs=comp105028_c0_seq1.path1;transcripts=comp105028_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75933593	75933978	.	+	.	ID=comp105028_c0_seq1.mrna1;geneID=comp105028_c0_seq1.path1;Name=comp105028_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=383;mismatches=3;indels=0;unknowns=0;Target=comp105028_c0_seq1 386 1 .;CDS_Target=comp105028_c0_seq1 280 206 .;locus=RLOC_00018500
Chr2	stalkie_big_nohaplotig	exon	75933593	75933978	99	+	.	Parent=comp105028_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	75933798	75933872	.	+	0	Parent=comp105028_c0_seq1.mrna1
Chr2	gffcl	locus	75946643	75948059	.	+	.	ID=RLOC_00018501;geneIDs=FBgn0019940.1.path1;transcripts=FBgn0019940.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75946643	75948059	.	+	.	ID=FBgn0019940.1.mrna1;geneID=FBgn0019940.1.path1;Name=FBgn0019940.1;Dir=sensecoverage=100.0;identity=99.9;matches=1163;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018501
Chr2	stalkie_big_nohaplotig	exon	75946643	75947407	99	+	.	Parent=FBgn0019940.1.mrna1;Target=FBgn0019940.1 1 765 +
Chr2	stalkie_big_nohaplotig	exon	75947526	75947649	100	+	.	Parent=FBgn0019940.1.mrna1;Target=FBgn0019940.1 766 889 +
Chr2	stalkie_big_nohaplotig	exon	75947717	75947873	100	+	.	Parent=FBgn0019940.1.mrna1;Target=FBgn0019940.1 890 1046 +
Chr2	stalkie_big_nohaplotig	exon	75947942	75948059	100	+	.	Parent=FBgn0019940.1.mrna1;Target=FBgn0019940.1 1047 1164 +
Chr2	stalkie_big_nohaplotig	CDS	75946643	75947407	.	+	0	Parent=FBgn0019940.1.mrna1;Target=FBgn0019940.1 1 765 +
Chr2	stalkie_big_nohaplotig	CDS	75947526	75947649	.	+	0	Parent=FBgn0019940.1.mrna1;Target=FBgn0019940.1 766 889 +
Chr2	stalkie_big_nohaplotig	CDS	75947717	75947873	.	+	2	Parent=FBgn0019940.1.mrna1;Target=FBgn0019940.1 890 1046 +
Chr2	stalkie_big_nohaplotig	CDS	75947942	75948059	.	+	1	Parent=FBgn0019940.1.mrna1;Target=FBgn0019940.1 1047 1164 +
Chr2	gffcl	locus	75948227	75949222	.	+	.	ID=RLOC_00018502;geneIDs=comp151679_c0_seq1.path1;transcripts=comp151679_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75948227	75949222	.	+	.	ID=comp151679_c0_seq1.mrna1;geneID=comp151679_c0_seq1.path1;Name=comp151679_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=981;mismatches=2;indels=13;unknowns=0;Target=comp151679_c0_seq1 983 1 .;CDS_Target=comp151679_c0_seq1 624 469 .;locus=RLOC_00018502
Chr2	stalkie_big_nohaplotig	exon	75948227	75949222	98	+	.	Parent=comp151679_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	75948695	75948850	.	+	0	Parent=comp151679_c0_seq1.mrna1
Chr2	gffcl	locus	75949535	75950296	.	-	.	ID=RLOC_00018503;geneIDs=FBgn0038343.1.path1;transcripts=FBgn0038343.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75949535	75950296	.	-	.	ID=FBgn0038343.1.mrna1;geneID=FBgn0038343.1.path1;Name=FBgn0038343.1;Dir=sensecoverage=100.0;identity=100.0;matches=372;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018503
Chr2	stalkie_big_nohaplotig	exon	75949535	75949739	100	-	.	Parent=FBgn0038343.1.mrna1;Target=FBgn0038343.1 168 372 +
Chr2	stalkie_big_nohaplotig	exon	75949960	75950053	100	-	.	Parent=FBgn0038343.1.mrna1;Target=FBgn0038343.1 74 167 +
Chr2	stalkie_big_nohaplotig	exon	75950224	75950296	100	-	.	Parent=FBgn0038343.1.mrna1;Target=FBgn0038343.1 1 73 +
Chr2	stalkie_big_nohaplotig	CDS	75949535	75949739	.	-	1	Parent=FBgn0038343.1.mrna1;Target=FBgn0038343.1 168 372 +
Chr2	stalkie_big_nohaplotig	CDS	75949960	75950053	.	-	2	Parent=FBgn0038343.1.mrna1;Target=FBgn0038343.1 74 167 +
Chr2	stalkie_big_nohaplotig	CDS	75950224	75950296	.	-	0	Parent=FBgn0038343.1.mrna1;Target=FBgn0038343.1 1 73 +
Chr2	gffcl	locus	75970278	75991291	.	+	.	ID=RLOC_00018504;geneIDs=FBgn0034139.1.path1;transcripts=FBgn0034139.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75970278	75991291	.	+	.	ID=FBgn0034139.1.mrna1;geneID=FBgn0034139.1.path1;Name=FBgn0034139.1;Dir=sensecoverage=90.2;identity=100.0;matches=971;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018504
Chr2	stalkie_big_nohaplotig	exon	75970278	75970478	100	+	.	Parent=FBgn0034139.1.mrna1;Target=FBgn0034139.1 107 307 +
Chr2	stalkie_big_nohaplotig	exon	75990463	75990667	100	+	.	Parent=FBgn0034139.1.mrna1;Target=FBgn0034139.1 308 512 +
Chr2	stalkie_big_nohaplotig	exon	75990727	75991291	100	+	.	Parent=FBgn0034139.1.mrna1;Target=FBgn0034139.1 513 1077 +
Chr2	stalkie_big_nohaplotig	CDS	75970280	75970478	.	+	0	Parent=FBgn0034139.1.mrna1;Target=FBgn0034139.1 109 307 +
Chr2	stalkie_big_nohaplotig	CDS	75990463	75990667	.	+	2	Parent=FBgn0034139.1.mrna1;Target=FBgn0034139.1 308 512 +
Chr2	stalkie_big_nohaplotig	CDS	75990727	75991291	.	+	1	Parent=FBgn0034139.1.mrna1;Target=FBgn0034139.1 513 1077 +
Chr2	gffcl	locus	75989775	75990429	.	-	.	ID=RLOC_00018505;geneIDs=comp147557_c0_seq1.path1;transcripts=comp147557_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75989775	75990429	.	-	.	ID=comp147557_c0_seq1.mrna1;geneID=comp147557_c0_seq1.path1;Name=comp147557_c0_seq1;Dir=indeterminatecoverage=99.7;identity=95.9;matches=629;mismatches=26;indels=1;unknowns=0;Target=comp147557_c0_seq1 658 3 .;CDS_Target=comp147557_c0_seq1 595 563 .;locus=RLOC_00018505
Chr2	stalkie_big_nohaplotig	exon	75989775	75990429	95	-	.	Parent=comp147557_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	75989838	75989869	.	-	0	Parent=comp147557_c0_seq1.mrna1
Chr2	gffcl	locus	75998811	76006433	.	+	.	ID=RLOC_00018506;geneIDs=FBgn0038344.1.path1;transcripts=FBgn0038344.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	75998811	76006433	.	+	.	ID=FBgn0038344.1.mrna1;geneID=FBgn0038344.1.path1;Name=FBgn0038344.1;Dir=sensecoverage=100.0;identity=99.9;matches=6496;mismatches=8;indels=0;unknowns=0;locus=RLOC_00018506
Chr2	stalkie_big_nohaplotig	exon	75998811	75998935	100	+	.	Parent=FBgn0038344.1.mrna1;Target=FBgn0038344.1 1 125 +
Chr2	stalkie_big_nohaplotig	exon	75998999	76000659	99	+	.	Parent=FBgn0038344.1.mrna1;Target=FBgn0038344.1 126 1786 +
Chr2	stalkie_big_nohaplotig	exon	76000723	76001418	100	+	.	Parent=FBgn0038344.1.mrna1;Target=FBgn0038344.1 1787 2482 +
Chr2	stalkie_big_nohaplotig	exon	76001475	76002163	100	+	.	Parent=FBgn0038344.1.mrna1;Target=FBgn0038344.1 2483 3171 +
Chr2	stalkie_big_nohaplotig	exon	76002224	76002772	100	+	.	Parent=FBgn0038344.1.mrna1;Target=FBgn0038344.1 3172 3720 +
Chr2	stalkie_big_nohaplotig	exon	76002828	76003704	99	+	.	Parent=FBgn0038344.1.mrna1;Target=FBgn0038344.1 3721 4597 +
Chr2	stalkie_big_nohaplotig	exon	76003863	76004871	100	+	.	Parent=FBgn0038344.1.mrna1;Target=FBgn0038344.1 4598 5606 +
Chr2	stalkie_big_nohaplotig	exon	76004936	76005104	100	+	.	Parent=FBgn0038344.1.mrna1;Target=FBgn0038344.1 5607 5775 +
Chr2	stalkie_big_nohaplotig	exon	76005581	76005862	100	+	.	Parent=FBgn0038344.1.mrna1;Target=FBgn0038344.1 5776 6057 +
Chr2	stalkie_big_nohaplotig	exon	76005928	76006059	99	+	.	Parent=FBgn0038344.1.mrna1;Target=FBgn0038344.1 6058 6189 +
Chr2	stalkie_big_nohaplotig	exon	76006119	76006433	98	+	.	Parent=FBgn0038344.1.mrna1;Target=FBgn0038344.1 6190 6504 +
Chr2	stalkie_big_nohaplotig	CDS	75998811	75998935	.	+	0	Parent=FBgn0038344.1.mrna1;Target=FBgn0038344.1 1 125 +
Chr2	stalkie_big_nohaplotig	CDS	75998999	76000659	.	+	1	Parent=FBgn0038344.1.mrna1;Target=FBgn0038344.1 126 1786 +
Chr2	stalkie_big_nohaplotig	CDS	76000723	76001418	.	+	2	Parent=FBgn0038344.1.mrna1;Target=FBgn0038344.1 1787 2482 +
Chr2	stalkie_big_nohaplotig	CDS	76001475	76002163	.	+	2	Parent=FBgn0038344.1.mrna1;Target=FBgn0038344.1 2483 3171 +
Chr2	stalkie_big_nohaplotig	CDS	76002224	76002772	.	+	0	Parent=FBgn0038344.1.mrna1;Target=FBgn0038344.1 3172 3720 +
Chr2	stalkie_big_nohaplotig	CDS	76002828	76003704	.	+	0	Parent=FBgn0038344.1.mrna1;Target=FBgn0038344.1 3721 4597 +
Chr2	stalkie_big_nohaplotig	CDS	76003863	76004871	.	+	2	Parent=FBgn0038344.1.mrna1;Target=FBgn0038344.1 4598 5606 +
Chr2	stalkie_big_nohaplotig	CDS	76004936	76005104	.	+	1	Parent=FBgn0038344.1.mrna1;Target=FBgn0038344.1 5607 5775 +
Chr2	stalkie_big_nohaplotig	CDS	76005581	76005862	.	+	0	Parent=FBgn0038344.1.mrna1;Target=FBgn0038344.1 5776 6057 +
Chr2	stalkie_big_nohaplotig	CDS	76005928	76006059	.	+	0	Parent=FBgn0038344.1.mrna1;Target=FBgn0038344.1 6058 6189 +
Chr2	stalkie_big_nohaplotig	CDS	76006119	76006433	.	+	0	Parent=FBgn0038344.1.mrna1;Target=FBgn0038344.1 6190 6504 +
Chr2	gffcl	locus	76007112	76007507	.	.	.	ID=RLOC_00018507;geneIDs=comp147001_c0_seq1.path1,comp154974_c0_seq1.path1;transcripts=comp147001_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76007264	76007507	.	+	.	ID=comp147001_c0_seq1.mrna1;geneID=comp147001_c0_seq1.path1;Name=comp147001_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=242;mismatches=2;indels=0;unknowns=0;Target=comp147001_c0_seq1 244 1 .;CDS_Target=comp147001_c0_seq1 108 1 .;locus=RLOC_00018507
Chr2	stalkie_big_nohaplotig	exon	76007264	76007507	99	+	.	Parent=comp147001_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76007264	76007371	.	+	0	Parent=comp147001_c0_seq1.mrna1
Chr2	gffcl	locus	76007700	77955145	.	-	.	ID=RLOC_00018508;geneIDs=FBgn0261649.path1,FBgn0014006.1.path1,FBgn0038811.1.path1,FBgn0260003.1.path1,comp121688_c0_seq1.path1,comp150322_c0_seq1.path2,comp154277_c1_seq1.path1;transcripts=comp150322_c0_seq1.mrna2,comp154277_c1_seq1.mrna1,FBgn0014006.1.mrna1,FBgn0038811.1.mrna1,FBgn0261649.mrna1,comp121688_c0_seq1.mrna1,FBgn0260003.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76007700	76193022	.	-	.	ID=comp150322_c0_seq1.mrna2;geneID=comp150322_c0_seq1.path2;Name=comp150322_c0_seq1;Dir=indeterminatecoverage=77.0;identity=95.5;matches=596;mismatches=9;indels=19;unknowns=0;Target=comp150322_c0_seq1 630 460 .;locus=RLOC_00018508
Chr2	stalkie_big_nohaplotig	exon	76007700	76008150	99	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 845 395 .
Chr2	stalkie_big_nohaplotig	exon	76038340	76038349	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 394 385 .
Chr2	stalkie_big_nohaplotig	exon	76043954	76043961	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 384 377 .
Chr2	stalkie_big_nohaplotig	exon	76058721	76058724	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 376 373 .
Chr2	stalkie_big_nohaplotig	exon	76063420	76063421	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 372 371 .
Chr2	stalkie_big_nohaplotig	exon	76079445	76079448	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 370 367 .
Chr2	stalkie_big_nohaplotig	exon	76085994	76085996	33	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 366 364 .
Chr2	stalkie_big_nohaplotig	exon	76088664	76088666	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 363 361 .
Chr2	stalkie_big_nohaplotig	exon	76088673	76088679	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 324 318 .
Chr2	stalkie_big_nohaplotig	exon	76095987	76095988	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 317 316 .
Chr2	stalkie_big_nohaplotig	exon	76108862	76108868	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 315 309 .
Chr2	stalkie_big_nohaplotig	exon	76109938	76109958	54	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 308 278 .
Chr2	stalkie_big_nohaplotig	exon	76112698	76112704	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 277 271 .
Chr2	stalkie_big_nohaplotig	exon	76116133	76116140	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 270 263 .
Chr2	stalkie_big_nohaplotig	exon	76123021	76123031	90	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 262 252 .
Chr2	stalkie_big_nohaplotig	exon	76128905	76128911	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 251 245 .
Chr2	stalkie_big_nohaplotig	exon	76129566	76129568	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 244 242 .
Chr2	stalkie_big_nohaplotig	exon	76131375	76131376	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 241 240 .
Chr2	stalkie_big_nohaplotig	exon	76132937	76132942	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 239 234 .
Chr2	stalkie_big_nohaplotig	exon	76140988	76140996	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 233 225 .
Chr2	stalkie_big_nohaplotig	exon	76156350	76156351	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 224 223 .
Chr2	stalkie_big_nohaplotig	exon	76160213	76160217	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 222 218 .
Chr2	stalkie_big_nohaplotig	exon	76174764	76174767	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 217 214 .
Chr2	stalkie_big_nohaplotig	exon	76175401	76175414	35	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 213 209 .
Chr2	stalkie_big_nohaplotig	exon	76178941	76178945	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 208 204 .
Chr2	stalkie_big_nohaplotig	exon	76184476	76184478	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 203 201 .
Chr2	stalkie_big_nohaplotig	exon	76188118	76188120	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 200 198 .
Chr2	stalkie_big_nohaplotig	exon	76193020	76193022	100	-	.	Parent=comp150322_c0_seq1.mrna2;Target=comp150322_c0_seq1 197 195 .
Chr2	stalkie_big_nohaplotig	CDS	76007915	76008085	.	-	0	Parent=comp150322_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	76059226	76375647	.	-	.	ID=comp154277_c1_seq1.mrna1;geneID=comp154277_c1_seq1.path1;Name=comp154277_c1_seq1;Dir=antisensecoverage=65.8;identity=99.9;matches=3652;mismatches=0;indels=2;unknowns=0;locus=RLOC_00018508
Chr2	stalkie_big_nohaplotig	exon	76059226	76059233	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 122 129 -
Chr2	stalkie_big_nohaplotig	exon	76063420	76063424	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 130 134 -
Chr2	stalkie_big_nohaplotig	exon	76065173	76065176	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 135 138 -
Chr2	stalkie_big_nohaplotig	exon	76080951	76080954	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 139 142 -
Chr2	stalkie_big_nohaplotig	exon	76085200	76085202	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 143 145 -
Chr2	stalkie_big_nohaplotig	exon	76088378	76088386	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 146 154 -
Chr2	stalkie_big_nohaplotig	exon	76103192	76103197	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 155 160 -
Chr2	stalkie_big_nohaplotig	exon	76109932	76109933	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 161 162 -
Chr2	stalkie_big_nohaplotig	exon	76111078	76111081	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 163 166 -
Chr2	stalkie_big_nohaplotig	exon	76118560	76118561	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 167 168 -
Chr2	stalkie_big_nohaplotig	exon	76125946	76125953	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 169 176 -
Chr2	stalkie_big_nohaplotig	exon	76258755	76259287	99	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 177 707 -
Chr2	stalkie_big_nohaplotig	exon	76259394	76259471	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 708 785 -
Chr2	stalkie_big_nohaplotig	exon	76261297	76261500	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 786 989 -
Chr2	stalkie_big_nohaplotig	exon	76263996	76264272	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 990 1266 -
Chr2	stalkie_big_nohaplotig	exon	76264353	76264792	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 1267 1706 -
Chr2	stalkie_big_nohaplotig	exon	76264858	76264978	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 1707 1827 -
Chr2	stalkie_big_nohaplotig	exon	76265155	76265310	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 1828 1983 -
Chr2	stalkie_big_nohaplotig	exon	76265584	76265714	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 1984 2114 -
Chr2	stalkie_big_nohaplotig	exon	76266789	76266885	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 2115 2211 -
Chr2	stalkie_big_nohaplotig	exon	76266980	76267108	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 2212 2340 -
Chr2	stalkie_big_nohaplotig	exon	76267206	76267435	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 2341 2570 -
Chr2	stalkie_big_nohaplotig	exon	76267497	76267630	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 2571 2704 -
Chr2	stalkie_big_nohaplotig	exon	76267885	76268085	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 2705 2905 -
Chr2	stalkie_big_nohaplotig	exon	76268272	76268531	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 2906 3165 -
Chr2	stalkie_big_nohaplotig	exon	76358373	76358530	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 3166 3323 -
Chr2	stalkie_big_nohaplotig	exon	76363991	76364114	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 3324 3447 -
Chr2	stalkie_big_nohaplotig	exon	76369186	76369336	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 3448 3598 -
Chr2	stalkie_big_nohaplotig	exon	76375473	76375647	100	-	.	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 3599 3773 -
Chr2	stalkie_big_nohaplotig	CDS	76259461	76259471	.	-	2	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 775 785 .
Chr2	stalkie_big_nohaplotig	CDS	76261297	76261500	.	-	2	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 786 989 .
Chr2	stalkie_big_nohaplotig	CDS	76263996	76264272	.	-	0	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 990 1266 .
Chr2	stalkie_big_nohaplotig	CDS	76264353	76264792	.	-	2	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 1267 1706 .
Chr2	stalkie_big_nohaplotig	CDS	76264858	76264978	.	-	0	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 1707 1827 .
Chr2	stalkie_big_nohaplotig	CDS	76265155	76265310	.	-	0	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 1828 1983 .
Chr2	stalkie_big_nohaplotig	CDS	76265584	76265714	.	-	2	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 1984 2114 .
Chr2	stalkie_big_nohaplotig	CDS	76266789	76266885	.	-	0	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 2115 2211 .
Chr2	stalkie_big_nohaplotig	CDS	76266980	76267108	.	-	0	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 2212 2340 .
Chr2	stalkie_big_nohaplotig	CDS	76267206	76267435	.	-	2	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 2341 2570 .
Chr2	stalkie_big_nohaplotig	CDS	76267497	76267630	.	-	1	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 2571 2704 .
Chr2	stalkie_big_nohaplotig	CDS	76267885	76268085	.	-	1	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 2705 2905 .
Chr2	stalkie_big_nohaplotig	CDS	76268272	76268531	.	-	0	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 2906 3165 .
Chr2	stalkie_big_nohaplotig	CDS	76358373	76358530	.	-	2	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 3166 3323 .
Chr2	stalkie_big_nohaplotig	CDS	76363991	76364114	.	-	0	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 3324 3447 .
Chr2	stalkie_big_nohaplotig	CDS	76369186	76369336	.	-	1	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 3448 3598 .
Chr2	stalkie_big_nohaplotig	CDS	76375473	76375645	.	-	0	Parent=comp154277_c1_seq1.mrna1;Target=comp154277_c1_seq1 3599 3771 .
Chr2	stalkie_big_nohaplotig	mRNA	76067807	77955145	.	-	.	ID=FBgn0014006.1.mrna1;geneID=FBgn0014006.1.path1;Name=FBgn0014006.1;Dir=sensecoverage=94.5;identity=97.3;matches=3792;mismatches=47;indels=58;unknowns=0;locus=RLOC_00018508
Chr2	stalkie_big_nohaplotig	exon	76067807	76067816	100	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3884 3893 +
Chr2	stalkie_big_nohaplotig	exon	76076595	76076605	90	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3873 3883 +
Chr2	stalkie_big_nohaplotig	exon	76081889	76081904	87	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3858 3872 +
Chr2	stalkie_big_nohaplotig	exon	76090330	76090349	46	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3815 3857 +
Chr2	stalkie_big_nohaplotig	exon	76094806	76094815	80	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3805 3814 +
Chr2	stalkie_big_nohaplotig	exon	76095153	76095154	100	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3803 3804 +
Chr2	stalkie_big_nohaplotig	exon	76096185	76096195	100	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3792 3802 +
Chr2	stalkie_big_nohaplotig	exon	76110572	76110651	54	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3719 3791 +
Chr2	stalkie_big_nohaplotig	exon	76110720	76110753	50	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3675 3718 +
Chr2	stalkie_big_nohaplotig	exon	76111081	76111093	42	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3647 3674 +
Chr2	stalkie_big_nohaplotig	exon	76125614	76125620	100	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3635 3641 +
Chr2	stalkie_big_nohaplotig	exon	76132947	76132950	100	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3631 3634 +
Chr2	stalkie_big_nohaplotig	exon	76136406	76136408	100	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3628 3630 +
Chr2	stalkie_big_nohaplotig	exon	76137772	76137779	100	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3620 3627 +
Chr2	stalkie_big_nohaplotig	exon	76156127	76156130	100	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3616 3619 +
Chr2	stalkie_big_nohaplotig	exon	77950397	77950614	100	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3398 3615 +
Chr2	stalkie_big_nohaplotig	exon	77950683	77951239	99	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 2841 3397 +
Chr2	stalkie_big_nohaplotig	exon	77951339	77951494	100	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 2685 2840 +
Chr2	stalkie_big_nohaplotig	exon	77951560	77952161	99	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 2083 2684 +
Chr2	stalkie_big_nohaplotig	exon	77952228	77952428	100	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 1882 2082 +
Chr2	stalkie_big_nohaplotig	exon	77952512	77952853	100	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 1540 1881 +
Chr2	stalkie_big_nohaplotig	exon	77952922	77953641	100	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 820 1539 +
Chr2	stalkie_big_nohaplotig	exon	77953699	77953870	100	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 648 819 +
Chr2	stalkie_big_nohaplotig	exon	77953970	77954130	100	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 487 647 +
Chr2	stalkie_big_nohaplotig	exon	77954513	77954707	100	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 292 486 +
Chr2	stalkie_big_nohaplotig	exon	77954795	77954824	100	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 262 291 +
Chr2	stalkie_big_nohaplotig	exon	77954885	77955145	100	-	.	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 1 261 +
Chr2	stalkie_big_nohaplotig	CDS	76067809	76067816	.	-	2	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3884 3891 +
Chr2	stalkie_big_nohaplotig	CDS	76076595	76076605	.	-	1	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3873 3883 +
Chr2	stalkie_big_nohaplotig	CDS	76081889	76081904	.	-	2	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3858 3872 +
Chr2	stalkie_big_nohaplotig	CDS	76090330	76090349	.	-	1	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3815 3857 +
Chr2	stalkie_big_nohaplotig	CDS	76094806	76094815	.	-	2	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3805 3814 +
Chr2	stalkie_big_nohaplotig	CDS	76095153	76095154	.	-	1	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3803 3804 +
Chr2	stalkie_big_nohaplotig	CDS	76096185	76096195	.	-	0	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3792 3802 +
Chr2	stalkie_big_nohaplotig	CDS	76110572	76110651	.	-	2	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3719 3791 +
Chr2	stalkie_big_nohaplotig	CDS	76110720	76110753	.	-	0	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3675 3718 +
Chr2	stalkie_big_nohaplotig	CDS	76111081	76111093	.	-	1	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3647 3674 +
Chr2	stalkie_big_nohaplotig	CDS	76125614	76125620	.	-	2	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3635 3641 +
Chr2	stalkie_big_nohaplotig	CDS	76132947	76132950	.	-	0	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3631 3634 +
Chr2	stalkie_big_nohaplotig	CDS	76136406	76136408	.	-	0	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3628 3630 +
Chr2	stalkie_big_nohaplotig	CDS	76137772	76137779	.	-	2	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3620 3627 +
Chr2	stalkie_big_nohaplotig	CDS	76156127	76156130	.	-	0	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3616 3619 +
Chr2	stalkie_big_nohaplotig	CDS	77950397	77950614	.	-	2	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 3398 3615 +
Chr2	stalkie_big_nohaplotig	CDS	77950683	77951239	.	-	1	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 2841 3397 +
Chr2	stalkie_big_nohaplotig	CDS	77951339	77951494	.	-	1	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 2685 2840 +
Chr2	stalkie_big_nohaplotig	CDS	77951560	77952161	.	-	0	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 2083 2684 +
Chr2	stalkie_big_nohaplotig	CDS	77952228	77952428	.	-	0	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 1882 2082 +
Chr2	stalkie_big_nohaplotig	CDS	77952512	77952853	.	-	0	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 1540 1881 +
Chr2	stalkie_big_nohaplotig	CDS	77952922	77953641	.	-	0	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 820 1539 +
Chr2	stalkie_big_nohaplotig	CDS	77953699	77953870	.	-	1	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 648 819 +
Chr2	stalkie_big_nohaplotig	CDS	77953970	77954130	.	-	0	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 487 647 +
Chr2	stalkie_big_nohaplotig	CDS	77954513	77954707	.	-	0	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 292 486 +
Chr2	stalkie_big_nohaplotig	CDS	77954795	77954824	.	-	0	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 262 291 +
Chr2	stalkie_big_nohaplotig	CDS	77954885	77955145	.	-	0	Parent=FBgn0014006.1.mrna1;Target=FBgn0014006.1 1 261 +
Chr2	stalkie_big_nohaplotig	mRNA	76088679	76090161	.	-	.	ID=FBgn0038811.1.mrna1;geneID=FBgn0038811.1.path1;Name=FBgn0038811.1;Dir=sensecoverage=100.0;identity=100.0;matches=1320;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018508
Chr2	stalkie_big_nohaplotig	exon	76088679	76089153	100	-	.	Parent=FBgn0038811.1.mrna1;Target=FBgn0038811.1 846 1320 +
Chr2	stalkie_big_nohaplotig	exon	76089209	76089479	100	-	.	Parent=FBgn0038811.1.mrna1;Target=FBgn0038811.1 575 845 +
Chr2	stalkie_big_nohaplotig	exon	76089531	76089999	100	-	.	Parent=FBgn0038811.1.mrna1;Target=FBgn0038811.1 106 574 +
Chr2	stalkie_big_nohaplotig	exon	76090057	76090161	100	-	.	Parent=FBgn0038811.1.mrna1;Target=FBgn0038811.1 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	76088679	76089153	.	-	1	Parent=FBgn0038811.1.mrna1;Target=FBgn0038811.1 846 1320 +
Chr2	stalkie_big_nohaplotig	CDS	76089209	76089479	.	-	2	Parent=FBgn0038811.1.mrna1;Target=FBgn0038811.1 575 845 +
Chr2	stalkie_big_nohaplotig	CDS	76089531	76089999	.	-	0	Parent=FBgn0038811.1.mrna1;Target=FBgn0038811.1 106 574 +
Chr2	stalkie_big_nohaplotig	CDS	76090057	76090161	.	-	0	Parent=FBgn0038811.1.mrna1;Target=FBgn0038811.1 1 105 +
Chr2	stalkie_big_nohaplotig	mRNA	76118096	76125393	.	-	.	ID=FBgn0261649.mrna1;geneID=FBgn0261649.path1;Name=FBgn0261649;Dir=sensecoverage=100.0;identity=99.9;matches=2169;mismatches=1;indels=2;unknowns=0;Target=FBgn0261649 3 59 +;locus=RLOC_00018508
Chr2	stalkie_big_nohaplotig	exon	76118096	76118153	98	-	.	Parent=FBgn0261649.mrna1;Target=FBgn0261649 2114 2172 +
Chr2	stalkie_big_nohaplotig	exon	76118235	76120052	99	-	.	Parent=FBgn0261649.mrna1;Target=FBgn0261649 296 2113 +
Chr2	stalkie_big_nohaplotig	exon	76123734	76123968	100	-	.	Parent=FBgn0261649.mrna1;Target=FBgn0261649 61 295 +
Chr2	stalkie_big_nohaplotig	exon	76125335	76125393	98	-	.	Parent=FBgn0261649.mrna1;Target=FBgn0261649 1 60 +
Chr2	stalkie_big_nohaplotig	CDS	76125336	76125391	.	-	0	Parent=FBgn0261649.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76136073	76138557	.	-	.	ID=comp121688_c0_seq1.mrna1;geneID=comp121688_c0_seq1.path1;Name=comp121688_c0_seq1;Dir=sensecoverage=99.9;identity=99.8;matches=1099;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018508
Chr2	stalkie_big_nohaplotig	exon	76136073	76136557	100	-	.	Parent=comp121688_c0_seq1.mrna1;Target=comp121688_c0_seq1 618 1102 +
Chr2	stalkie_big_nohaplotig	exon	76137755	76137790	100	-	.	Parent=comp121688_c0_seq1.mrna1;Target=comp121688_c0_seq1 582 617 +
Chr2	stalkie_big_nohaplotig	exon	76137867	76138062	100	-	.	Parent=comp121688_c0_seq1.mrna1;Target=comp121688_c0_seq1 386 581 +
Chr2	stalkie_big_nohaplotig	exon	76138115	76138319	100	-	.	Parent=comp121688_c0_seq1.mrna1;Target=comp121688_c0_seq1 181 385 +
Chr2	stalkie_big_nohaplotig	exon	76138379	76138557	98	-	.	Parent=comp121688_c0_seq1.mrna1;Target=comp121688_c0_seq1 2 180 +
Chr2	stalkie_big_nohaplotig	CDS	76136278	76136557	.	-	1	Parent=comp121688_c0_seq1.mrna1;Target=comp121688_c0_seq1 618 897 +
Chr2	stalkie_big_nohaplotig	CDS	76137755	76137790	.	-	1	Parent=comp121688_c0_seq1.mrna1;Target=comp121688_c0_seq1 582 617 +
Chr2	stalkie_big_nohaplotig	CDS	76137867	76138062	.	-	2	Parent=comp121688_c0_seq1.mrna1;Target=comp121688_c0_seq1 386 581 +
Chr2	stalkie_big_nohaplotig	CDS	76138115	76138310	.	-	0	Parent=comp121688_c0_seq1.mrna1;Target=comp121688_c0_seq1 190 385 +
Chr2	stalkie_big_nohaplotig	mRNA	76259169	76287014	.	-	.	ID=FBgn0260003.1.mrna1;geneID=FBgn0260003.1.path1;Name=FBgn0260003.1;Dir=sensecoverage=100.0;identity=100.0;matches=2780;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018508
Chr2	stalkie_big_nohaplotig	exon	76259169	76259287	100	-	.	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 2663 2781 +
Chr2	stalkie_big_nohaplotig	exon	76263996	76264272	100	-	.	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 2386 2662 +
Chr2	stalkie_big_nohaplotig	exon	76264353	76264792	100	-	.	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 1946 2385 +
Chr2	stalkie_big_nohaplotig	exon	76264858	76264978	100	-	.	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 1825 1945 +
Chr2	stalkie_big_nohaplotig	exon	76265155	76265310	100	-	.	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 1669 1824 +
Chr2	stalkie_big_nohaplotig	exon	76265584	76265714	100	-	.	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 1538 1668 +
Chr2	stalkie_big_nohaplotig	exon	76266789	76266885	100	-	.	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 1441 1537 +
Chr2	stalkie_big_nohaplotig	exon	76266980	76267108	100	-	.	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 1312 1440 +
Chr2	stalkie_big_nohaplotig	exon	76267206	76267435	100	-	.	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 1082 1311 +
Chr2	stalkie_big_nohaplotig	exon	76267497	76267630	100	-	.	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 948 1081 +
Chr2	stalkie_big_nohaplotig	exon	76267885	76268085	100	-	.	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 747 947 +
Chr2	stalkie_big_nohaplotig	exon	76268272	76268531	100	-	.	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 487 746 +
Chr2	stalkie_big_nohaplotig	exon	76286529	76287014	99	-	.	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 1 486 +
Chr2	stalkie_big_nohaplotig	CDS	76259169	76259287	.	-	2	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 2663 2781 +
Chr2	stalkie_big_nohaplotig	CDS	76263996	76264272	.	-	0	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 2386 2662 +
Chr2	stalkie_big_nohaplotig	CDS	76264353	76264792	.	-	2	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 1946 2385 +
Chr2	stalkie_big_nohaplotig	CDS	76264858	76264978	.	-	0	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 1825 1945 +
Chr2	stalkie_big_nohaplotig	CDS	76265155	76265310	.	-	0	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 1669 1824 +
Chr2	stalkie_big_nohaplotig	CDS	76265584	76265714	.	-	2	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 1538 1668 +
Chr2	stalkie_big_nohaplotig	CDS	76266789	76266885	.	-	0	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 1441 1537 +
Chr2	stalkie_big_nohaplotig	CDS	76266980	76267108	.	-	0	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 1312 1440 +
Chr2	stalkie_big_nohaplotig	CDS	76267206	76267435	.	-	2	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 1082 1311 +
Chr2	stalkie_big_nohaplotig	CDS	76267497	76267630	.	-	1	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 948 1081 +
Chr2	stalkie_big_nohaplotig	CDS	76267885	76268085	.	-	1	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 747 947 +
Chr2	stalkie_big_nohaplotig	CDS	76268272	76268531	.	-	0	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 487 746 +
Chr2	stalkie_big_nohaplotig	CDS	76286529	76287014	.	-	0	Parent=FBgn0260003.1.mrna1;Target=FBgn0260003.1 1 486 +
Chr2	gffcl	locus	76008278	76008705	.	-	.	ID=RLOC_00018509;geneIDs=FBgn0039007.1.path1;transcripts=FBgn0039007.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76008278	76008705	.	-	.	ID=FBgn0039007.1.mrna1;geneID=FBgn0039007.1.path1;Name=FBgn0039007.1;Dir=sensecoverage=100.0;identity=100.0;matches=345;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018509
Chr2	stalkie_big_nohaplotig	exon	76008278	76008543	100	-	.	Parent=FBgn0039007.1.mrna1;Target=FBgn0039007.1 80 345 +
Chr2	stalkie_big_nohaplotig	exon	76008627	76008705	100	-	.	Parent=FBgn0039007.1.mrna1;Target=FBgn0039007.1 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	76008278	76008543	.	-	2	Parent=FBgn0039007.1.mrna1;Target=FBgn0039007.1 80 345 +
Chr2	stalkie_big_nohaplotig	CDS	76008627	76008705	.	-	0	Parent=FBgn0039007.1.mrna1;Target=FBgn0039007.1 1 79 +
Chr2	gffcl	locus	76008950	76009723	.	-	.	ID=RLOC_00018510;geneIDs=comp118006_c0_seq1.path1;transcripts=comp118006_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76008950	76009723	.	-	.	ID=comp118006_c0_seq1.mrna1;geneID=comp118006_c0_seq1.path1;Name=comp118006_c0_seq1;Dir=indeterminatecoverage=98.5;identity=99.5;matches=770;mismatches=4;indels=0;unknowns=0;Target=comp118006_c0_seq1 774 1 .;CDS_Target=comp118006_c0_seq1 745 611 .;locus=RLOC_00018510
Chr2	stalkie_big_nohaplotig	exon	76008950	76009723	99	-	.	Parent=comp118006_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76008979	76009113	.	-	0	Parent=comp118006_c0_seq1.mrna1
Chr2	gffcl	locus	76020193	76020850	.	+	.	ID=RLOC_00018512;geneIDs=comp139380_c0_seq1.path1;transcripts=comp139380_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76020193	76020850	.	+	.	ID=comp139380_c0_seq1.mrna1;geneID=comp139380_c0_seq1.path1;Name=comp139380_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=602;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018512
Chr2	stalkie_big_nohaplotig	exon	76020193	76020295	100	+	.	Parent=comp139380_c0_seq1.mrna1;Target=comp139380_c0_seq1 500 602 -
Chr2	stalkie_big_nohaplotig	exon	76020352	76020850	100	+	.	Parent=comp139380_c0_seq1.mrna1;Target=comp139380_c0_seq1 1 499 -
Chr2	stalkie_big_nohaplotig	CDS	76020193	76020295	.	+	0	Parent=comp139380_c0_seq1.mrna1;Target=comp139380_c0_seq1 500 602 .
Chr2	stalkie_big_nohaplotig	CDS	76020352	76020689	.	+	2	Parent=comp139380_c0_seq1.mrna1;Target=comp139380_c0_seq1 162 499 .
Chr2	gffcl	locus	76021607	76028231	.	-	.	ID=RLOC_00018513;geneIDs=FBgn0039009.path1;transcripts=FBgn0039009.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76021607	76028231	.	-	.	ID=FBgn0039009.mrna1;geneID=FBgn0039009.path1;Name=FBgn0039009;Dir=sensecoverage=100.0;identity=100.0;matches=1260;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018513
Chr2	stalkie_big_nohaplotig	exon	76021607	76021698	100	-	.	Parent=FBgn0039009.mrna1;Target=FBgn0039009 1169 1260 +
Chr2	stalkie_big_nohaplotig	exon	76021759	76021932	100	-	.	Parent=FBgn0039009.mrna1;Target=FBgn0039009 995 1168 +
Chr2	stalkie_big_nohaplotig	exon	76021979	76022345	100	-	.	Parent=FBgn0039009.mrna1;Target=FBgn0039009 628 994 +
Chr2	stalkie_big_nohaplotig	exon	76027469	76027678	100	-	.	Parent=FBgn0039009.mrna1;Target=FBgn0039009 418 627 +
Chr2	stalkie_big_nohaplotig	exon	76027737	76027937	100	-	.	Parent=FBgn0039009.mrna1;Target=FBgn0039009 217 417 +
Chr2	stalkie_big_nohaplotig	exon	76028016	76028231	100	-	.	Parent=FBgn0039009.mrna1;Target=FBgn0039009 1 216 +
Chr2	stalkie_big_nohaplotig	CDS	76021607	76021698	.	-	2	Parent=FBgn0039009.mrna1;Target=FBgn0039009 1169 1260 +
Chr2	stalkie_big_nohaplotig	CDS	76021759	76021932	.	-	2	Parent=FBgn0039009.mrna1;Target=FBgn0039009 995 1168 +
Chr2	stalkie_big_nohaplotig	CDS	76021979	76022345	.	-	0	Parent=FBgn0039009.mrna1;Target=FBgn0039009 628 994 +
Chr2	stalkie_big_nohaplotig	CDS	76027469	76027678	.	-	0	Parent=FBgn0039009.mrna1;Target=FBgn0039009 418 627 +
Chr2	stalkie_big_nohaplotig	CDS	76027737	76027937	.	-	0	Parent=FBgn0039009.mrna1;Target=FBgn0039009 217 417 +
Chr2	stalkie_big_nohaplotig	CDS	76028016	76028231	.	-	0	Parent=FBgn0039009.mrna1;Target=FBgn0039009 1 216 +
Chr2	gffcl	locus	76029937	76031501	.	-	.	ID=RLOC_00018514;geneIDs=comp150003_c0_seq1.path1;transcripts=comp150003_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76029937	76031501	.	-	.	ID=comp150003_c0_seq1.mrna1;geneID=comp150003_c0_seq1.path1;Name=comp150003_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.9;matches=1564;mismatches=1;indels=0;unknowns=0;Target=comp150003_c0_seq1 1574 10 .;CDS_Target=comp150003_c0_seq1 918 664 .;locus=RLOC_00018514
Chr2	stalkie_big_nohaplotig	exon	76029937	76031501	99	-	.	Parent=comp150003_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76030593	76030847	.	-	0	Parent=comp150003_c0_seq1.mrna1
Chr2	gffcl	locus	76035513	76035786	.	-	.	ID=RLOC_00018515;geneIDs=comp224527_c0_seq1.path1;transcripts=comp224527_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76035513	76035786	.	-	.	ID=comp224527_c0_seq1.mrna1;geneID=comp224527_c0_seq1.path1;Name=comp224527_c0_seq1;Dir=indeterminatecoverage=88.4;identity=100.0;matches=274;mismatches=0;indels=0;unknowns=0;Target=comp224527_c0_seq1 296 23 .;CDS_Target=comp224527_c0_seq1 123 31 .;locus=RLOC_00018515
Chr2	stalkie_big_nohaplotig	exon	76035513	76035786	100	-	.	Parent=comp224527_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76035686	76035778	.	-	0	Parent=comp224527_c0_seq1.mrna1
Chr2	gffcl	locus	76036964	76042783	.	-	.	ID=RLOC_00018516;geneIDs=FBgn0051151.1.path1;transcripts=FBgn0051151.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76036964	76042783	.	-	.	ID=FBgn0051151.1.mrna1;geneID=FBgn0051151.1.path1;Name=FBgn0051151.1;Dir=sensecoverage=100.0;identity=99.9;matches=4587;mismatches=5;indels=1;unknowns=0;locus=RLOC_00018516
Chr2	stalkie_big_nohaplotig	exon	76036964	76037426	99	-	.	Parent=FBgn0051151.1.mrna1;Target=FBgn0051151.1 4130 4593 +
Chr2	stalkie_big_nohaplotig	exon	76038017	76038248	100	-	.	Parent=FBgn0051151.1.mrna1;Target=FBgn0051151.1 3898 4129 +
Chr2	stalkie_big_nohaplotig	exon	76038354	76041322	99	-	.	Parent=FBgn0051151.1.mrna1;Target=FBgn0051151.1 929 3897 +
Chr2	stalkie_big_nohaplotig	exon	76041450	76041566	100	-	.	Parent=FBgn0051151.1.mrna1;Target=FBgn0051151.1 812 928 +
Chr2	stalkie_big_nohaplotig	exon	76041687	76041839	100	-	.	Parent=FBgn0051151.1.mrna1;Target=FBgn0051151.1 659 811 +
Chr2	stalkie_big_nohaplotig	exon	76042060	76042200	100	-	.	Parent=FBgn0051151.1.mrna1;Target=FBgn0051151.1 518 658 +
Chr2	stalkie_big_nohaplotig	exon	76042267	76042783	100	-	.	Parent=FBgn0051151.1.mrna1;Target=FBgn0051151.1 1 517 +
Chr2	stalkie_big_nohaplotig	CDS	76036964	76037426	.	-	2	Parent=FBgn0051151.1.mrna1;Target=FBgn0051151.1 4130 4593 +
Chr2	stalkie_big_nohaplotig	CDS	76038017	76038248	.	-	0	Parent=FBgn0051151.1.mrna1;Target=FBgn0051151.1 3898 4129 +
Chr2	stalkie_big_nohaplotig	CDS	76038354	76041322	.	-	2	Parent=FBgn0051151.1.mrna1;Target=FBgn0051151.1 929 3897 +
Chr2	stalkie_big_nohaplotig	CDS	76041450	76041566	.	-	2	Parent=FBgn0051151.1.mrna1;Target=FBgn0051151.1 812 928 +
Chr2	stalkie_big_nohaplotig	CDS	76041687	76041839	.	-	2	Parent=FBgn0051151.1.mrna1;Target=FBgn0051151.1 659 811 +
Chr2	stalkie_big_nohaplotig	CDS	76042060	76042200	.	-	2	Parent=FBgn0051151.1.mrna1;Target=FBgn0051151.1 518 658 +
Chr2	stalkie_big_nohaplotig	CDS	76042267	76042783	.	-	0	Parent=FBgn0051151.1.mrna1;Target=FBgn0051151.1 1 517 +
Chr2	gffcl	locus	76050606	76051746	.	-	.	ID=RLOC_00018517;geneIDs=FBgn0039013.1.path1;transcripts=FBgn0039013.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76050606	76051746	.	-	.	ID=FBgn0039013.1.mrna1;geneID=FBgn0039013.1.path1;Name=FBgn0039013.1;Dir=sensecoverage=100.0;identity=100.0;matches=1089;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018517
Chr2	stalkie_big_nohaplotig	exon	76050606	76051379	100	-	.	Parent=FBgn0039013.1.mrna1;Target=FBgn0039013.1 316 1089 +
Chr2	stalkie_big_nohaplotig	exon	76051432	76051746	100	-	.	Parent=FBgn0039013.1.mrna1;Target=FBgn0039013.1 1 315 +
Chr2	stalkie_big_nohaplotig	CDS	76050606	76051379	.	-	0	Parent=FBgn0039013.1.mrna1;Target=FBgn0039013.1 316 1089 +
Chr2	stalkie_big_nohaplotig	CDS	76051432	76051746	.	-	0	Parent=FBgn0039013.1.mrna1;Target=FBgn0039013.1 1 315 +
Chr2	gffcl	locus	76058729	76066706	.	+	.	ID=RLOC_00018518;geneIDs=FBgn0039014.1.path1;transcripts=FBgn0039014.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76058729	76066706	.	+	.	ID=FBgn0039014.1.mrna1;geneID=FBgn0039014.1.path1;Name=FBgn0039014.1;Dir=sensecoverage=100.0;identity=100.0;matches=828;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018518
Chr2	stalkie_big_nohaplotig	exon	76058729	76058922	100	+	.	Parent=FBgn0039014.1.mrna1;Target=FBgn0039014.1 1 194 +
Chr2	stalkie_big_nohaplotig	exon	76059970	76060045	100	+	.	Parent=FBgn0039014.1.mrna1;Target=FBgn0039014.1 195 270 +
Chr2	stalkie_big_nohaplotig	exon	76064826	76065012	100	+	.	Parent=FBgn0039014.1.mrna1;Target=FBgn0039014.1 271 457 +
Chr2	stalkie_big_nohaplotig	exon	76066207	76066356	100	+	.	Parent=FBgn0039014.1.mrna1;Target=FBgn0039014.1 458 607 +
Chr2	stalkie_big_nohaplotig	exon	76066427	76066489	100	+	.	Parent=FBgn0039014.1.mrna1;Target=FBgn0039014.1 608 670 +
Chr2	stalkie_big_nohaplotig	exon	76066549	76066706	100	+	.	Parent=FBgn0039014.1.mrna1;Target=FBgn0039014.1 671 828 +
Chr2	stalkie_big_nohaplotig	CDS	76058729	76058922	.	+	0	Parent=FBgn0039014.1.mrna1;Target=FBgn0039014.1 1 194 +
Chr2	stalkie_big_nohaplotig	CDS	76059970	76060045	.	+	1	Parent=FBgn0039014.1.mrna1;Target=FBgn0039014.1 195 270 +
Chr2	stalkie_big_nohaplotig	CDS	76064826	76065012	.	+	0	Parent=FBgn0039014.1.mrna1;Target=FBgn0039014.1 271 457 +
Chr2	stalkie_big_nohaplotig	CDS	76066207	76066356	.	+	2	Parent=FBgn0039014.1.mrna1;Target=FBgn0039014.1 458 607 +
Chr2	stalkie_big_nohaplotig	CDS	76066427	76066489	.	+	2	Parent=FBgn0039014.1.mrna1;Target=FBgn0039014.1 608 670 +
Chr2	stalkie_big_nohaplotig	CDS	76066549	76066706	.	+	2	Parent=FBgn0039014.1.mrna1;Target=FBgn0039014.1 671 828 +
Chr2	gffcl	locus	76064159	76064492	.	+	.	ID=RLOC_00018519;geneIDs=comp116856_c0_seq1.path1;transcripts=comp116856_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76064159	76064492	.	+	.	ID=comp116856_c0_seq1.mrna1;geneID=comp116856_c0_seq1.path1;Name=comp116856_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=332;mismatches=2;indels=0;unknowns=0;Target=comp116856_c0_seq1 334 1 .;CDS_Target=comp116856_c0_seq1 333 247 .;locus=RLOC_00018519
Chr2	stalkie_big_nohaplotig	exon	76064159	76064492	99	+	.	Parent=comp116856_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76064405	76064491	.	+	0	Parent=comp116856_c0_seq1.mrna1
Chr2	gffcl	locus	76068522	76272955	.	+	.	ID=RLOC_00018520;geneIDs=comp152259_c0_seq1.path1,comp162654_c0_seq1.path1;transcripts=comp162654_c0_seq1.mrna1,comp152259_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76068522	76272955	.	+	.	ID=comp162654_c0_seq1.mrna1;geneID=comp162654_c0_seq1.path1;Name=comp162654_c0_seq1;Dir=indeterminatecoverage=83.1;identity=98.8;matches=1297;mismatches=13;indels=3;unknowns=0;Target=comp162654_c0_seq1 1044 1003 .;locus=RLOC_00018520
Chr2	stalkie_big_nohaplotig	exon	76068522	76069443	99	+	.	Parent=comp162654_c0_seq1.mrna1;Target=comp162654_c0_seq1 922 1 .
Chr2	stalkie_big_nohaplotig	exon	76071071	76071371	96	+	.	Parent=comp162654_c0_seq1.mrna1;Target=comp162654_c0_seq1 1226 923 .
Chr2	stalkie_big_nohaplotig	exon	76166926	76166932	100	+	.	Parent=comp162654_c0_seq1.mrna1;Target=comp162654_c0_seq1 1233 1227 .
Chr2	stalkie_big_nohaplotig	exon	76166958	76166959	100	+	.	Parent=comp162654_c0_seq1.mrna1;Target=comp162654_c0_seq1 1283 1282 .
Chr2	stalkie_big_nohaplotig	exon	76174764	76174767	100	+	.	Parent=comp162654_c0_seq1.mrna1;Target=comp162654_c0_seq1 1287 1284 .
Chr2	stalkie_big_nohaplotig	exon	76176273	76176274	100	+	.	Parent=comp162654_c0_seq1.mrna1;Target=comp162654_c0_seq1 1289 1288 .
Chr2	stalkie_big_nohaplotig	exon	76184117	76184124	75	+	.	Parent=comp162654_c0_seq1.mrna1;Target=comp162654_c0_seq1 1297 1290 .
Chr2	stalkie_big_nohaplotig	exon	76191852	76191855	100	+	.	Parent=comp162654_c0_seq1.mrna1;Target=comp162654_c0_seq1 1301 1298 .
Chr2	stalkie_big_nohaplotig	exon	76199359	76199363	100	+	.	Parent=comp162654_c0_seq1.mrna1;Target=comp162654_c0_seq1 1306 1302 .
Chr2	stalkie_big_nohaplotig	exon	76206259	76206260	100	+	.	Parent=comp162654_c0_seq1.mrna1;Target=comp162654_c0_seq1 1308 1307 .
Chr2	stalkie_big_nohaplotig	exon	76211033	76211035	100	+	.	Parent=comp162654_c0_seq1.mrna1;Target=comp162654_c0_seq1 1311 1309 .
Chr2	stalkie_big_nohaplotig	exon	76215618	76215622	100	+	.	Parent=comp162654_c0_seq1.mrna1;Target=comp162654_c0_seq1 1316 1312 .
Chr2	stalkie_big_nohaplotig	exon	76220675	76220690	100	+	.	Parent=comp162654_c0_seq1.mrna1;Target=comp162654_c0_seq1 1332 1317 .
Chr2	stalkie_big_nohaplotig	exon	76259104	76259110	100	+	.	Parent=comp162654_c0_seq1.mrna1;Target=comp162654_c0_seq1 1339 1333 .
Chr2	stalkie_big_nohaplotig	exon	76266921	76266925	100	+	.	Parent=comp162654_c0_seq1.mrna1;Target=comp162654_c0_seq1 1344 1340 .
Chr2	stalkie_big_nohaplotig	exon	76268151	76268155	100	+	.	Parent=comp162654_c0_seq1.mrna1;Target=comp162654_c0_seq1 1349 1345 .
Chr2	stalkie_big_nohaplotig	exon	76270668	76270677	100	+	.	Parent=comp162654_c0_seq1.mrna1;Target=comp162654_c0_seq1 1359 1350 .
Chr2	stalkie_big_nohaplotig	exon	76272954	76272955	100	+	.	Parent=comp162654_c0_seq1.mrna1;Target=comp162654_c0_seq1 1361 1360 .
Chr2	stalkie_big_nohaplotig	CDS	76071151	76071191	.	+	0	Parent=comp162654_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76068592	76109966	.	+	.	ID=comp152259_c0_seq1.mrna1;geneID=comp152259_c0_seq1.path1;Name=comp152259_c0_seq1;Dir=indeterminatecoverage=71.4;identity=99.1;matches=1172;mismatches=9;indels=2;unknowns=0;locus=RLOC_00018520
Chr2	stalkie_big_nohaplotig	exon	76068592	76068603	91	+	.	Parent=comp152259_c0_seq1.mrna1;Target=comp152259_c0_seq1 494 483 .
Chr2	stalkie_big_nohaplotig	exon	76088605	76088608	100	+	.	Parent=comp152259_c0_seq1.mrna1;Target=comp152259_c0_seq1 520 517 .
Chr2	stalkie_big_nohaplotig	exon	76108802	76109966	99	+	.	Parent=comp152259_c0_seq1.mrna1;Target=comp152259_c0_seq1 1685 521 .
Chr2	stalkie_big_nohaplotig	CDS	76068593	76068603	.	+	0	Parent=comp152259_c0_seq1.mrna1;Target=comp152259_c0_seq1 494 484 .
Chr2	stalkie_big_nohaplotig	CDS	76088605	76088608	.	+	1	Parent=comp152259_c0_seq1.mrna1;Target=comp152259_c0_seq1 520 517 .
Chr2	stalkie_big_nohaplotig	CDS	76108802	76108920	.	+	0	Parent=comp152259_c0_seq1.mrna1;Target=comp152259_c0_seq1 639 521 .
Chr2	gffcl	locus	76074709	76075974	.	-	.	ID=RLOC_00018521;geneIDs=FBgn0038809.path1;transcripts=FBgn0038809.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76074709	76075974	.	-	.	ID=FBgn0038809.mrna1;geneID=FBgn0038809.path1;Name=FBgn0038809;Dir=sensecoverage=100.0;identity=100.0;matches=981;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018521
Chr2	stalkie_big_nohaplotig	exon	76074709	76074916	100	-	.	Parent=FBgn0038809.mrna1;Target=FBgn0038809 774 981 +
Chr2	stalkie_big_nohaplotig	exon	76074975	76075083	100	-	.	Parent=FBgn0038809.mrna1;Target=FBgn0038809 665 773 +
Chr2	stalkie_big_nohaplotig	exon	76075147	76075311	100	-	.	Parent=FBgn0038809.mrna1;Target=FBgn0038809 500 664 +
Chr2	stalkie_big_nohaplotig	exon	76075415	76075534	100	-	.	Parent=FBgn0038809.mrna1;Target=FBgn0038809 380 499 +
Chr2	stalkie_big_nohaplotig	exon	76075596	76075974	100	-	.	Parent=FBgn0038809.mrna1;Target=FBgn0038809 1 379 +
Chr2	stalkie_big_nohaplotig	CDS	76074709	76074916	.	-	1	Parent=FBgn0038809.mrna1;Target=FBgn0038809 774 981 +
Chr2	stalkie_big_nohaplotig	CDS	76074975	76075083	.	-	2	Parent=FBgn0038809.mrna1;Target=FBgn0038809 665 773 +
Chr2	stalkie_big_nohaplotig	CDS	76075147	76075311	.	-	2	Parent=FBgn0038809.mrna1;Target=FBgn0038809 500 664 +
Chr2	stalkie_big_nohaplotig	CDS	76075415	76075534	.	-	2	Parent=FBgn0038809.mrna1;Target=FBgn0038809 380 499 +
Chr2	stalkie_big_nohaplotig	CDS	76075596	76075974	.	-	0	Parent=FBgn0038809.mrna1;Target=FBgn0038809 1 379 +
Chr2	gffcl	locus	76077147	76077531	.	-	.	ID=RLOC_00018522;geneIDs=comp147890_c0_seq1.path1;transcripts=comp147890_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76077147	76077531	.	-	.	ID=comp147890_c0_seq1.mrna1;geneID=comp147890_c0_seq1.path1;Name=comp147890_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=385;mismatches=0;indels=0;unknowns=0;Target=comp147890_c0_seq1 385 1 .;CDS_Target=comp147890_c0_seq1 352 149 .;locus=RLOC_00018522
Chr2	stalkie_big_nohaplotig	exon	76077147	76077531	100	-	.	Parent=comp147890_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76077180	76077383	.	-	0	Parent=comp147890_c0_seq1.mrna1
Chr2	gffcl	locus	76086162	76088481	.	+	.	ID=RLOC_00018523;geneIDs=FBgn0038810.1.path1;transcripts=FBgn0038810.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76086162	76088481	.	+	.	ID=FBgn0038810.1.mrna1;geneID=FBgn0038810.1.path1;Name=FBgn0038810.1;Dir=sensecoverage=100.0;identity=99.7;matches=2013;mismatches=6;indels=0;unknowns=0;locus=RLOC_00018523
Chr2	stalkie_big_nohaplotig	exon	76086162	76086336	100	+	.	Parent=FBgn0038810.1.mrna1;Target=FBgn0038810.1 1 175 +
Chr2	stalkie_big_nohaplotig	exon	76086393	76086766	99	+	.	Parent=FBgn0038810.1.mrna1;Target=FBgn0038810.1 176 549 +
Chr2	stalkie_big_nohaplotig	exon	76086822	76087481	99	+	.	Parent=FBgn0038810.1.mrna1;Target=FBgn0038810.1 550 1209 +
Chr2	stalkie_big_nohaplotig	exon	76087546	76087707	100	+	.	Parent=FBgn0038810.1.mrna1;Target=FBgn0038810.1 1210 1371 +
Chr2	stalkie_big_nohaplotig	exon	76087773	76088293	99	+	.	Parent=FBgn0038810.1.mrna1;Target=FBgn0038810.1 1372 1892 +
Chr2	stalkie_big_nohaplotig	exon	76088355	76088481	99	+	.	Parent=FBgn0038810.1.mrna1;Target=FBgn0038810.1 1893 2019 +
Chr2	stalkie_big_nohaplotig	CDS	76086162	76086336	.	+	0	Parent=FBgn0038810.1.mrna1;Target=FBgn0038810.1 1 175 +
Chr2	stalkie_big_nohaplotig	CDS	76086393	76086766	.	+	2	Parent=FBgn0038810.1.mrna1;Target=FBgn0038810.1 176 549 +
Chr2	stalkie_big_nohaplotig	CDS	76086822	76087481	.	+	0	Parent=FBgn0038810.1.mrna1;Target=FBgn0038810.1 550 1209 +
Chr2	stalkie_big_nohaplotig	CDS	76087546	76087707	.	+	0	Parent=FBgn0038810.1.mrna1;Target=FBgn0038810.1 1210 1371 +
Chr2	stalkie_big_nohaplotig	CDS	76087773	76088293	.	+	0	Parent=FBgn0038810.1.mrna1;Target=FBgn0038810.1 1372 1892 +
Chr2	stalkie_big_nohaplotig	CDS	76088355	76088481	.	+	1	Parent=FBgn0038810.1.mrna1;Target=FBgn0038810.1 1893 2019 +
Chr2	gffcl	locus	76090489	76091581	.	+	.	ID=RLOC_00018524;geneIDs=FBgn0263863.1.path1;transcripts=FBgn0263863.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76090489	76091581	.	+	.	ID=FBgn0263863.1.mrna1;geneID=FBgn0263863.1.path1;Name=FBgn0263863.1;Dir=sensecoverage=100.0;identity=99.9;matches=1040;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018524
Chr2	stalkie_big_nohaplotig	exon	76090489	76090554	98	+	.	Parent=FBgn0263863.1.mrna1;Target=FBgn0263863.1 1 66 +
Chr2	stalkie_big_nohaplotig	exon	76090607	76091581	100	+	.	Parent=FBgn0263863.1.mrna1;Target=FBgn0263863.1 67 1041 +
Chr2	stalkie_big_nohaplotig	CDS	76090489	76090554	.	+	0	Parent=FBgn0263863.1.mrna1;Target=FBgn0263863.1 1 66 +
Chr2	stalkie_big_nohaplotig	CDS	76090607	76091581	.	+	0	Parent=FBgn0263863.1.mrna1;Target=FBgn0263863.1 67 1041 +
Chr2	gffcl	locus	76091865	76107385	.	-	.	ID=RLOC_00018525;geneIDs=FBgn0020278.1.path1;transcripts=FBgn0020278.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76091865	76107385	.	-	.	ID=FBgn0020278.1.mrna1;geneID=FBgn0020278.1.path1;Name=FBgn0020278.1;Dir=sensecoverage=100.0;identity=99.9;matches=4710;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018525
Chr2	stalkie_big_nohaplotig	exon	76091865	76092415	100	-	.	Parent=FBgn0020278.1.mrna1;Target=FBgn0020278.1 4163 4713 +
Chr2	stalkie_big_nohaplotig	exon	76092490	76092733	100	-	.	Parent=FBgn0020278.1.mrna1;Target=FBgn0020278.1 3919 4162 +
Chr2	stalkie_big_nohaplotig	exon	76092899	76093855	99	-	.	Parent=FBgn0020278.1.mrna1;Target=FBgn0020278.1 2962 3918 +
Chr2	stalkie_big_nohaplotig	exon	76093915	76094697	100	-	.	Parent=FBgn0020278.1.mrna1;Target=FBgn0020278.1 2179 2961 +
Chr2	stalkie_big_nohaplotig	exon	76105208	76107385	99	-	.	Parent=FBgn0020278.1.mrna1;Target=FBgn0020278.1 1 2178 +
Chr2	stalkie_big_nohaplotig	CDS	76091865	76092415	.	-	2	Parent=FBgn0020278.1.mrna1;Target=FBgn0020278.1 4163 4713 +
Chr2	stalkie_big_nohaplotig	CDS	76092490	76092733	.	-	0	Parent=FBgn0020278.1.mrna1;Target=FBgn0020278.1 3919 4162 +
Chr2	stalkie_big_nohaplotig	CDS	76092899	76093855	.	-	0	Parent=FBgn0020278.1.mrna1;Target=FBgn0020278.1 2962 3918 +
Chr2	stalkie_big_nohaplotig	CDS	76093915	76094697	.	-	0	Parent=FBgn0020278.1.mrna1;Target=FBgn0020278.1 2179 2961 +
Chr2	stalkie_big_nohaplotig	CDS	76105208	76107385	.	-	0	Parent=FBgn0020278.1.mrna1;Target=FBgn0020278.1 1 2178 +
Chr2	gffcl	locus	76147036	76166871	.	+	.	ID=RLOC_00018527;geneIDs=FBgn0038721.1.path1;transcripts=FBgn0038721.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76147036	76166871	.	+	.	ID=FBgn0038721.1.mrna1;geneID=FBgn0038721.1.path1;Name=FBgn0038721.1;Dir=sensecoverage=100.0;identity=100.0;matches=3350;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018527
Chr2	stalkie_big_nohaplotig	exon	76147036	76147484	100	+	.	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 1 449 +
Chr2	stalkie_big_nohaplotig	exon	76157426	76157789	100	+	.	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 450 813 +
Chr2	stalkie_big_nohaplotig	exon	76157850	76157918	100	+	.	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 814 882 +
Chr2	stalkie_big_nohaplotig	exon	76159180	76159251	100	+	.	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 883 954 +
Chr2	stalkie_big_nohaplotig	exon	76159674	76159834	99	+	.	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 955 1115 +
Chr2	stalkie_big_nohaplotig	exon	76160699	76160867	100	+	.	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 1116 1284 +
Chr2	stalkie_big_nohaplotig	exon	76160921	76161041	100	+	.	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 1285 1405 +
Chr2	stalkie_big_nohaplotig	exon	76161102	76161213	100	+	.	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 1406 1517 +
Chr2	stalkie_big_nohaplotig	exon	76161277	76161838	100	+	.	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 1518 2079 +
Chr2	stalkie_big_nohaplotig	exon	76161945	76162148	100	+	.	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 2080 2283 +
Chr2	stalkie_big_nohaplotig	exon	76162212	76162470	100	+	.	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 2284 2542 +
Chr2	stalkie_big_nohaplotig	exon	76162536	76162741	100	+	.	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 2543 2748 +
Chr2	stalkie_big_nohaplotig	exon	76162817	76162992	100	+	.	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 2749 2924 +
Chr2	stalkie_big_nohaplotig	exon	76163057	76163162	100	+	.	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 2925 3030 +
Chr2	stalkie_big_nohaplotig	exon	76166495	76166633	100	+	.	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 3031 3169 +
Chr2	stalkie_big_nohaplotig	exon	76166690	76166871	100	+	.	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 3170 3351 +
Chr2	stalkie_big_nohaplotig	CDS	76147036	76147484	.	+	0	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 1 449 +
Chr2	stalkie_big_nohaplotig	CDS	76157426	76157789	.	+	1	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 450 813 +
Chr2	stalkie_big_nohaplotig	CDS	76157850	76157918	.	+	0	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 814 882 +
Chr2	stalkie_big_nohaplotig	CDS	76159180	76159251	.	+	0	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 883 954 +
Chr2	stalkie_big_nohaplotig	CDS	76159674	76159834	.	+	0	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 955 1115 +
Chr2	stalkie_big_nohaplotig	CDS	76160699	76160867	.	+	1	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 1116 1284 +
Chr2	stalkie_big_nohaplotig	CDS	76160921	76161041	.	+	0	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 1285 1405 +
Chr2	stalkie_big_nohaplotig	CDS	76161102	76161213	.	+	2	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 1406 1517 +
Chr2	stalkie_big_nohaplotig	CDS	76161277	76161838	.	+	1	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 1518 2079 +
Chr2	stalkie_big_nohaplotig	CDS	76161945	76162148	.	+	0	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 2080 2283 +
Chr2	stalkie_big_nohaplotig	CDS	76162212	76162470	.	+	0	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 2284 2542 +
Chr2	stalkie_big_nohaplotig	CDS	76162536	76162741	.	+	2	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 2543 2748 +
Chr2	stalkie_big_nohaplotig	CDS	76162817	76162992	.	+	0	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 2749 2924 +
Chr2	stalkie_big_nohaplotig	CDS	76163057	76163162	.	+	1	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 2925 3030 +
Chr2	stalkie_big_nohaplotig	CDS	76166495	76166633	.	+	0	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 3031 3169 +
Chr2	stalkie_big_nohaplotig	CDS	76166690	76166871	.	+	2	Parent=FBgn0038721.1.mrna1;Target=FBgn0038721.1 3170 3351 +
Chr2	gffcl	locus	76167581	76167836	.	-	.	ID=RLOC_00018528;geneIDs=comp145783_c0_seq1.path1;transcripts=comp145783_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76167581	76167836	.	-	.	ID=comp145783_c0_seq1.mrna1;geneID=comp145783_c0_seq1.path1;Name=comp145783_c0_seq1;Dir=indeterminatecoverage=86.5;identity=99.6;matches=255;mismatches=1;indels=0;unknowns=0;Target=comp145783_c0_seq1 256 1 .;CDS_Target=comp145783_c0_seq1 126 85 .;locus=RLOC_00018528
Chr2	stalkie_big_nohaplotig	exon	76167581	76167836	99	-	.	Parent=comp145783_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76167711	76167752	.	-	0	Parent=comp145783_c0_seq1.mrna1
Chr2	gffcl	locus	76174041	76174674	.	+	.	ID=RLOC_00018529;geneIDs=comp74314_c0_seq1.path1;transcripts=comp74314_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76174041	76174674	.	+	.	ID=comp74314_c0_seq1.mrna1;geneID=comp74314_c0_seq1.path1;Name=comp74314_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=633;mismatches=1;indels=0;unknowns=0;Target=comp74314_c0_seq1 634 1 .;CDS_Target=comp74314_c0_seq1 414 208 .;locus=RLOC_00018529
Chr2	stalkie_big_nohaplotig	exon	76174041	76174674	99	+	.	Parent=comp74314_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76174248	76174454	.	+	0	Parent=comp74314_c0_seq1.mrna1
Chr2	gffcl	locus	76180121	76182142	.	+	.	ID=RLOC_00018530;geneIDs=comp147444_c0_seq1.path1;transcripts=comp147444_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76180121	76182142	.	+	.	ID=comp147444_c0_seq1.mrna1;geneID=comp147444_c0_seq1.path1;Name=comp147444_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=417;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018530
Chr2	stalkie_big_nohaplotig	exon	76180121	76180328	100	+	.	Parent=comp147444_c0_seq1.mrna1;Target=comp147444_c0_seq1 1 208 +
Chr2	stalkie_big_nohaplotig	exon	76181934	76182142	100	+	.	Parent=comp147444_c0_seq1.mrna1;Target=comp147444_c0_seq1 209 417 +
Chr2	stalkie_big_nohaplotig	CDS	76180300	76180328	.	+	0	Parent=comp147444_c0_seq1.mrna1;Target=comp147444_c0_seq1 180 208 +
Chr2	stalkie_big_nohaplotig	CDS	76181934	76181997	.	+	1	Parent=comp147444_c0_seq1.mrna1;Target=comp147444_c0_seq1 209 272 +
Chr2	gffcl	locus	76201000	76202265	.	+	.	ID=RLOC_00018531;geneIDs=FBgn0038720.1.path1;transcripts=FBgn0038720.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76201000	76202265	.	+	.	ID=FBgn0038720.1.mrna1;geneID=FBgn0038720.1.path1;Name=FBgn0038720.1;Dir=sensecoverage=100.0;identity=99.9;matches=1046;mismatches=0;indels=1;unknowns=0;locus=RLOC_00018531
Chr2	stalkie_big_nohaplotig	exon	76201000	76201347	100	+	.	Parent=FBgn0038720.1.mrna1;Target=FBgn0038720.1 1 348 +
Chr2	stalkie_big_nohaplotig	exon	76201414	76201672	100	+	.	Parent=FBgn0038720.1.mrna1;Target=FBgn0038720.1 349 607 +
Chr2	stalkie_big_nohaplotig	exon	76201748	76202165	99	+	.	Parent=FBgn0038720.1.mrna1;Target=FBgn0038720.1 608 1026 +
Chr2	stalkie_big_nohaplotig	exon	76202245	76202265	100	+	.	Parent=FBgn0038720.1.mrna1;Target=FBgn0038720.1 1027 1047 +
Chr2	stalkie_big_nohaplotig	CDS	76201000	76201347	.	+	0	Parent=FBgn0038720.1.mrna1;Target=FBgn0038720.1 1 348 +
Chr2	stalkie_big_nohaplotig	CDS	76201414	76201672	.	+	0	Parent=FBgn0038720.1.mrna1;Target=FBgn0038720.1 349 607 +
Chr2	stalkie_big_nohaplotig	CDS	76201748	76202165	.	+	2	Parent=FBgn0038720.1.mrna1;Target=FBgn0038720.1 608 1026 +
Chr2	stalkie_big_nohaplotig	CDS	76202245	76202265	.	+	1	Parent=FBgn0038720.1.mrna1;Target=FBgn0038720.1 1027 1047 +
Chr2	gffcl	locus	76227976	76230088	.	-	.	ID=RLOC_00018533;geneIDs=FBgn0038719.1.path1;transcripts=FBgn0038719.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76227976	76230088	.	-	.	ID=FBgn0038719.1.mrna1;geneID=FBgn0038719.1.path1;Name=FBgn0038719.1;Dir=sensecoverage=100.0;identity=99.8;matches=1670;mismatches=4;indels=0;unknowns=0;locus=RLOC_00018533
Chr2	stalkie_big_nohaplotig	exon	76227976	76228096	100	-	.	Parent=FBgn0038719.1.mrna1;Target=FBgn0038719.1 1554 1674 +
Chr2	stalkie_big_nohaplotig	exon	76228152	76228658	99	-	.	Parent=FBgn0038719.1.mrna1;Target=FBgn0038719.1 1047 1553 +
Chr2	stalkie_big_nohaplotig	exon	76228723	76229140	100	-	.	Parent=FBgn0038719.1.mrna1;Target=FBgn0038719.1 629 1046 +
Chr2	stalkie_big_nohaplotig	exon	76229216	76229474	100	-	.	Parent=FBgn0038719.1.mrna1;Target=FBgn0038719.1 370 628 +
Chr2	stalkie_big_nohaplotig	exon	76229645	76229831	100	-	.	Parent=FBgn0038719.1.mrna1;Target=FBgn0038719.1 183 369 +
Chr2	stalkie_big_nohaplotig	exon	76229907	76230088	98	-	.	Parent=FBgn0038719.1.mrna1;Target=FBgn0038719.1 1 182 +
Chr2	stalkie_big_nohaplotig	CDS	76227976	76228096	.	-	1	Parent=FBgn0038719.1.mrna1;Target=FBgn0038719.1 1554 1674 +
Chr2	stalkie_big_nohaplotig	CDS	76228152	76228658	.	-	1	Parent=FBgn0038719.1.mrna1;Target=FBgn0038719.1 1047 1553 +
Chr2	stalkie_big_nohaplotig	CDS	76228723	76229140	.	-	2	Parent=FBgn0038719.1.mrna1;Target=FBgn0038719.1 629 1046 +
Chr2	stalkie_big_nohaplotig	CDS	76229216	76229474	.	-	0	Parent=FBgn0038719.1.mrna1;Target=FBgn0038719.1 370 628 +
Chr2	stalkie_big_nohaplotig	CDS	76229645	76229831	.	-	1	Parent=FBgn0038719.1.mrna1;Target=FBgn0038719.1 183 369 +
Chr2	stalkie_big_nohaplotig	CDS	76229907	76230088	.	-	0	Parent=FBgn0038719.1.mrna1;Target=FBgn0038719.1 1 182 +
Chr2	gffcl	locus	76240098	76244485	.	+	.	ID=RLOC_00018534;geneIDs=FBgn0038716.1.path1;transcripts=FBgn0038716.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76240098	76244485	.	+	.	ID=FBgn0038716.1.mrna1;geneID=FBgn0038716.1.path1;Name=FBgn0038716.1;Dir=sensecoverage=100.0;identity=99.9;matches=1682;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018534
Chr2	stalkie_big_nohaplotig	exon	76240098	76240285	100	+	.	Parent=FBgn0038716.1.mrna1;Target=FBgn0038716.1 1 188 +
Chr2	stalkie_big_nohaplotig	exon	76240361	76240635	99	+	.	Parent=FBgn0038716.1.mrna1;Target=FBgn0038716.1 189 463 +
Chr2	stalkie_big_nohaplotig	exon	76240694	76240843	100	+	.	Parent=FBgn0038716.1.mrna1;Target=FBgn0038716.1 464 613 +
Chr2	stalkie_big_nohaplotig	exon	76243209	76243614	100	+	.	Parent=FBgn0038716.1.mrna1;Target=FBgn0038716.1 614 1019 +
Chr2	stalkie_big_nohaplotig	exon	76243680	76243918	100	+	.	Parent=FBgn0038716.1.mrna1;Target=FBgn0038716.1 1020 1258 +
Chr2	stalkie_big_nohaplotig	exon	76244003	76244276	100	+	.	Parent=FBgn0038716.1.mrna1;Target=FBgn0038716.1 1259 1532 +
Chr2	stalkie_big_nohaplotig	exon	76244335	76244485	100	+	.	Parent=FBgn0038716.1.mrna1;Target=FBgn0038716.1 1533 1683 +
Chr2	stalkie_big_nohaplotig	CDS	76240098	76240285	.	+	0	Parent=FBgn0038716.1.mrna1;Target=FBgn0038716.1 1 188 +
Chr2	stalkie_big_nohaplotig	CDS	76240361	76240635	.	+	1	Parent=FBgn0038716.1.mrna1;Target=FBgn0038716.1 189 463 +
Chr2	stalkie_big_nohaplotig	CDS	76240694	76240843	.	+	2	Parent=FBgn0038716.1.mrna1;Target=FBgn0038716.1 464 613 +
Chr2	stalkie_big_nohaplotig	CDS	76243209	76243614	.	+	2	Parent=FBgn0038716.1.mrna1;Target=FBgn0038716.1 614 1019 +
Chr2	stalkie_big_nohaplotig	CDS	76243680	76243918	.	+	1	Parent=FBgn0038716.1.mrna1;Target=FBgn0038716.1 1020 1258 +
Chr2	stalkie_big_nohaplotig	CDS	76244003	76244276	.	+	2	Parent=FBgn0038716.1.mrna1;Target=FBgn0038716.1 1259 1532 +
Chr2	stalkie_big_nohaplotig	CDS	76244335	76244485	.	+	1	Parent=FBgn0038716.1.mrna1;Target=FBgn0038716.1 1533 1683 +
Chr2	gffcl	locus	76253871	76254275	.	-	.	ID=RLOC_00018536;geneIDs=comp112936_c0_seq1.path1;transcripts=comp112936_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76253871	76254275	.	-	.	ID=comp112936_c0_seq1.mrna1;geneID=comp112936_c0_seq1.path1;Name=comp112936_c0_seq1;Dir=indeterminatecoverage=95.5;identity=99.3;matches=402;mismatches=3;indels=0;unknowns=0;Target=comp112936_c0_seq1 408 4 .;CDS_Target=comp112936_c0_seq1 336 271 .;locus=RLOC_00018536
Chr2	stalkie_big_nohaplotig	exon	76253871	76254275	99	-	.	Parent=comp112936_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76253943	76254008	.	-	0	Parent=comp112936_c0_seq1.mrna1
Chr2	gffcl	locus	76255417	76255803	.	+	.	ID=RLOC_00018537;geneIDs=comp159519_c1_seq1.path1;transcripts=comp159519_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76255417	76255803	.	+	.	ID=comp159519_c1_seq1.mrna1;geneID=comp159519_c1_seq1.path1;Name=comp159519_c1_seq1;Dir=indeterminatecoverage=99.7;identity=99.5;matches=385;mismatches=2;indels=0;unknowns=0;Target=comp159519_c1_seq1 388 2 .;CDS_Target=comp159519_c1_seq1 47 3 .;locus=RLOC_00018537
Chr2	stalkie_big_nohaplotig	exon	76255417	76255803	99	+	.	Parent=comp159519_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76255418	76255462	.	+	0	Parent=comp159519_c1_seq1.mrna1
Chr2	gffcl	locus	76258341	76258605	.	+	.	ID=RLOC_00018538;geneIDs=comp46316_c0_seq1.path1;transcripts=comp46316_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76258341	76258605	.	+	.	ID=comp46316_c0_seq1.mrna1;geneID=comp46316_c0_seq1.path1;Name=comp46316_c0_seq1;Dir=indeterminatecoverage=94.3;identity=100.0;matches=265;mismatches=0;indels=0;unknowns=0;Target=comp46316_c0_seq1 265 1 .;CDS_Target=comp46316_c0_seq1 51 1 .;locus=RLOC_00018538
Chr2	stalkie_big_nohaplotig	exon	76258341	76258605	100	+	.	Parent=comp46316_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76258341	76258391	.	+	0	Parent=comp46316_c0_seq1.mrna1
Chr2	gffcl	locus	76259852	76260338	.	-	.	ID=RLOC_00018539;geneIDs=comp148409_c0_seq1.path1;transcripts=comp148409_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76259852	76260338	.	-	.	ID=comp148409_c0_seq1.mrna1;geneID=comp148409_c0_seq1.path1;Name=comp148409_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=485;mismatches=2;indels=6;unknowns=0;Target=comp148409_c0_seq1 493 1 .;CDS_Target=comp148409_c0_seq1 463 347 .;locus=RLOC_00018539
Chr2	stalkie_big_nohaplotig	exon	76259852	76260338	98	-	.	Parent=comp148409_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76259877	76259992	.	-	0	Parent=comp148409_c0_seq1.mrna1
Chr2	gffcl	locus	76382337	76382609	.	-	.	ID=RLOC_00018540;geneIDs=comp83833_c0_seq1.path1;transcripts=comp83833_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76382337	76382609	.	-	.	ID=comp83833_c0_seq1.mrna1;geneID=comp83833_c0_seq1.path1;Name=comp83833_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=273;mismatches=0;indels=0;unknowns=0;Target=comp83833_c0_seq1 273 1 .;CDS_Target=comp83833_c0_seq1 180 1 .;locus=RLOC_00018540
Chr2	stalkie_big_nohaplotig	exon	76382337	76382609	100	-	.	Parent=comp83833_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76382430	76382609	.	-	0	Parent=comp83833_c0_seq1.mrna1
Chr2	gffcl	locus	76468335	76472748	.	+	.	ID=RLOC_00018543;geneIDs=comp163314_c1_seq1.path1;transcripts=comp163314_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76468335	76472748	.	+	.	ID=comp163314_c1_seq1.mrna1;geneID=comp163314_c1_seq1.path1;Name=comp163314_c1_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=3267;mismatches=4;indels=0;unknowns=0;locus=RLOC_00018543
Chr2	stalkie_big_nohaplotig	exon	76468335	76469795	99	+	.	Parent=comp163314_c1_seq1.mrna1;Target=comp163314_c1_seq1 1811 3271 -
Chr2	stalkie_big_nohaplotig	exon	76469860	76470174	100	+	.	Parent=comp163314_c1_seq1.mrna1;Target=comp163314_c1_seq1 1496 1810 -
Chr2	stalkie_big_nohaplotig	exon	76470239	76470544	100	+	.	Parent=comp163314_c1_seq1.mrna1;Target=comp163314_c1_seq1 1190 1495 -
Chr2	stalkie_big_nohaplotig	exon	76470628	76471130	100	+	.	Parent=comp163314_c1_seq1.mrna1;Target=comp163314_c1_seq1 687 1189 -
Chr2	stalkie_big_nohaplotig	exon	76471199	76471286	100	+	.	Parent=comp163314_c1_seq1.mrna1;Target=comp163314_c1_seq1 599 686 -
Chr2	stalkie_big_nohaplotig	exon	76472151	76472748	99	+	.	Parent=comp163314_c1_seq1.mrna1;Target=comp163314_c1_seq1 1 598 -
Chr2	stalkie_big_nohaplotig	CDS	76468335	76469795	.	+	0	Parent=comp163314_c1_seq1.mrna1;Target=comp163314_c1_seq1 1811 3271 .
Chr2	stalkie_big_nohaplotig	CDS	76469860	76470174	.	+	0	Parent=comp163314_c1_seq1.mrna1;Target=comp163314_c1_seq1 1496 1810 .
Chr2	stalkie_big_nohaplotig	CDS	76470239	76470544	.	+	0	Parent=comp163314_c1_seq1.mrna1;Target=comp163314_c1_seq1 1190 1495 .
Chr2	stalkie_big_nohaplotig	CDS	76470628	76471130	.	+	0	Parent=comp163314_c1_seq1.mrna1;Target=comp163314_c1_seq1 687 1189 .
Chr2	stalkie_big_nohaplotig	CDS	76471199	76471286	.	+	1	Parent=comp163314_c1_seq1.mrna1;Target=comp163314_c1_seq1 599 686 .
Chr2	stalkie_big_nohaplotig	CDS	76472151	76472747	.	+	0	Parent=comp163314_c1_seq1.mrna1;Target=comp163314_c1_seq1 2 598 .
Chr2	gffcl	locus	76522365	76523459	.	-	.	ID=RLOC_00018544;geneIDs=comp144056_c0_seq1.path1;transcripts=comp144056_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76522365	76523459	.	-	.	ID=comp144056_c0_seq1.mrna1;geneID=comp144056_c0_seq1.path1;Name=comp144056_c0_seq1;Dir=antisensecoverage=99.9;identity=99.9;matches=683;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018544
Chr2	stalkie_big_nohaplotig	exon	76522365	76522725	99	-	.	Parent=comp144056_c0_seq1.mrna1;Target=comp144056_c0_seq1 1 361 -
Chr2	stalkie_big_nohaplotig	exon	76523137	76523459	100	-	.	Parent=comp144056_c0_seq1.mrna1;Target=comp144056_c0_seq1 362 684 -
Chr2	stalkie_big_nohaplotig	CDS	76522378	76522725	.	-	0	Parent=comp144056_c0_seq1.mrna1;Target=comp144056_c0_seq1 14 361 .
Chr2	stalkie_big_nohaplotig	CDS	76523137	76523415	.	-	0	Parent=comp144056_c0_seq1.mrna1;Target=comp144056_c0_seq1 362 640 .
Chr2	gffcl	locus	76531285	76620075	.	-	.	ID=RLOC_00018545;geneIDs=comp155706_c0_seq1.path1;transcripts=comp155706_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76531285	76620075	.	-	.	ID=comp155706_c0_seq1.mrna1;geneID=comp155706_c0_seq1.path1;Name=comp155706_c0_seq1;Dir=indeterminatecoverage=96.6;identity=99.1;matches=1990;mismatches=3;indels=15;unknowns=0;Target=comp155706_c0_seq1 613 452 .;locus=RLOC_00018545
Chr2	stalkie_big_nohaplotig	exon	76531285	76531299	100	-	.	Parent=comp155706_c0_seq1.mrna1;Target=comp155706_c0_seq1 2043 2029 .
Chr2	stalkie_big_nohaplotig	exon	76531741	76531746	100	-	.	Parent=comp155706_c0_seq1.mrna1;Target=comp155706_c0_seq1 2028 2023 .
Chr2	stalkie_big_nohaplotig	exon	76539142	76539144	100	-	.	Parent=comp155706_c0_seq1.mrna1;Target=comp155706_c0_seq1 2022 2020 .
Chr2	stalkie_big_nohaplotig	exon	76542813	76542821	100	-	.	Parent=comp155706_c0_seq1.mrna1;Target=comp155706_c0_seq1 2019 2011 .
Chr2	stalkie_big_nohaplotig	exon	76546188	76546203	50	-	.	Parent=comp155706_c0_seq1.mrna1;Target=comp155706_c0_seq1 2010 2003 .
Chr2	stalkie_big_nohaplotig	exon	76552476	76552477	100	-	.	Parent=comp155706_c0_seq1.mrna1;Target=comp155706_c0_seq1 2002 2001 .
Chr2	stalkie_big_nohaplotig	exon	76552486	76552494	100	-	.	Parent=comp155706_c0_seq1.mrna1;Target=comp155706_c0_seq1 1974 1966 .
Chr2	stalkie_big_nohaplotig	exon	76557978	76557980	100	-	.	Parent=comp155706_c0_seq1.mrna1;Target=comp155706_c0_seq1 1965 1963 .
Chr2	stalkie_big_nohaplotig	exon	76563418	76563428	36	-	.	Parent=comp155706_c0_seq1.mrna1;Target=comp155706_c0_seq1 1962 1959 .
Chr2	stalkie_big_nohaplotig	exon	76569656	76569658	100	-	.	Parent=comp155706_c0_seq1.mrna1;Target=comp155706_c0_seq1 1958 1956 .
Chr2	stalkie_big_nohaplotig	exon	76572420	76572427	100	-	.	Parent=comp155706_c0_seq1.mrna1;Target=comp155706_c0_seq1 1955 1948 .
Chr2	stalkie_big_nohaplotig	exon	76572973	76572982	100	-	.	Parent=comp155706_c0_seq1.mrna1;Target=comp155706_c0_seq1 1947 1938 .
Chr2	stalkie_big_nohaplotig	exon	76578762	76578769	100	-	.	Parent=comp155706_c0_seq1.mrna1;Target=comp155706_c0_seq1 1930 1923 .
Chr2	stalkie_big_nohaplotig	exon	76584323	76584334	100	-	.	Parent=comp155706_c0_seq1.mrna1;Target=comp155706_c0_seq1 1916 1905 .
Chr2	stalkie_big_nohaplotig	exon	76584340	76584347	100	-	.	Parent=comp155706_c0_seq1.mrna1;Target=comp155706_c0_seq1 1897 1890 .
Chr2	stalkie_big_nohaplotig	exon	76598654	76598657	100	-	.	Parent=comp155706_c0_seq1.mrna1;Target=comp155706_c0_seq1 1888 1885 .
Chr2	stalkie_big_nohaplotig	exon	76603098	76603103	100	-	.	Parent=comp155706_c0_seq1.mrna1;Target=comp155706_c0_seq1 1884 1879 .
Chr2	stalkie_big_nohaplotig	exon	76604875	76604877	100	-	.	Parent=comp155706_c0_seq1.mrna1;Target=comp155706_c0_seq1 1878 1876 .
Chr2	stalkie_big_nohaplotig	exon	76617657	76617662	100	-	.	Parent=comp155706_c0_seq1.mrna1;Target=comp155706_c0_seq1 1875 1870 .
Chr2	stalkie_big_nohaplotig	exon	76618211	76620075	99	-	.	Parent=comp155706_c0_seq1.mrna1;Target=comp155706_c0_seq1 1869 5 .
Chr2	stalkie_big_nohaplotig	CDS	76619467	76619628	.	-	0	Parent=comp155706_c0_seq1.mrna1
Chr2	gffcl	locus	76546230	76546563	.	-	.	ID=RLOC_00018546;geneIDs=comp146112_c1_seq1.path1;transcripts=comp146112_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76546230	76546563	.	-	.	ID=comp146112_c1_seq1.mrna1;geneID=comp146112_c1_seq1.path1;Name=comp146112_c1_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=334;mismatches=0;indels=0;unknowns=0;Target=comp146112_c1_seq1 335 2 .;CDS_Target=comp146112_c1_seq1 96 4 .;locus=RLOC_00018546
Chr2	stalkie_big_nohaplotig	exon	76546230	76546563	100	-	.	Parent=comp146112_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76546469	76546561	.	-	0	Parent=comp146112_c1_seq1.mrna1
Chr2	gffcl	locus	76551117	76551482	.	-	.	ID=RLOC_00018547;geneIDs=comp148840_c0_seq1.path1;transcripts=comp148840_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76551117	76551482	.	-	.	ID=comp148840_c0_seq1.mrna1;geneID=comp148840_c0_seq1.path1;Name=comp148840_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=365;mismatches=1;indels=0;unknowns=0;Target=comp148840_c0_seq1 366 1 .;CDS_Target=comp148840_c0_seq1 75 1 .;locus=RLOC_00018547
Chr2	stalkie_big_nohaplotig	exon	76551117	76551482	99	-	.	Parent=comp148840_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76551408	76551482	.	-	0	Parent=comp148840_c0_seq1.mrna1
Chr2	gffcl	locus	76601547	76615021	.	+	.	ID=RLOC_00018548;geneIDs=FBgn0051221.1.path2;transcripts=FBgn0051221.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	76601547	76615021	.	+	.	ID=FBgn0051221.1.mrna2;geneID=FBgn0051221.1.path2;Name=FBgn0051221.1;Dir=sensecoverage=69.2;identity=100.0;matches=473;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018548
Chr2	stalkie_big_nohaplotig	exon	76601547	76601675	100	+	.	Parent=FBgn0051221.1.mrna2;Target=FBgn0051221.1 212 340 +
Chr2	stalkie_big_nohaplotig	exon	76611250	76611448	100	+	.	Parent=FBgn0051221.1.mrna2;Target=FBgn0051221.1 341 539 +
Chr2	stalkie_big_nohaplotig	exon	76614877	76615021	100	+	.	Parent=FBgn0051221.1.mrna2;Target=FBgn0051221.1 540 684 +
Chr2	stalkie_big_nohaplotig	CDS	76601547	76601675	.	+	1	Parent=FBgn0051221.1.mrna2;Target=FBgn0051221.1 212 340 +
Chr2	stalkie_big_nohaplotig	CDS	76611250	76611448	.	+	1	Parent=FBgn0051221.1.mrna2;Target=FBgn0051221.1 341 539 +
Chr2	stalkie_big_nohaplotig	CDS	76614877	76615021	.	+	0	Parent=FBgn0051221.1.mrna2;Target=FBgn0051221.1 540 684 +
Chr2	gffcl	locus	76616712	76617643	.	+	.	ID=RLOC_00018549;geneIDs=comp160440_c0_seq1.path1;transcripts=comp160440_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76616712	76617643	.	+	.	ID=comp160440_c0_seq1.mrna1;geneID=comp160440_c0_seq1.path1;Name=comp160440_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=928;mismatches=4;indels=1;unknowns=0;Target=comp160440_c0_seq1 933 1 .;CDS_Target=comp160440_c0_seq1 304 206 .;locus=RLOC_00018549
Chr2	stalkie_big_nohaplotig	exon	76616712	76617643	99	+	.	Parent=comp160440_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76616917	76617015	.	+	0	Parent=comp160440_c0_seq1.mrna1
Chr2	gffcl	locus	76617664	76618166	.	-	.	ID=RLOC_00018550;geneIDs=comp154430_c0_seq1.path1;transcripts=comp154430_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76617664	76618166	.	-	.	ID=comp154430_c0_seq1.mrna1;geneID=comp154430_c0_seq1.path1;Name=comp154430_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=500;mismatches=3;indels=0;unknowns=0;Target=comp154430_c0_seq1 503 1 .;CDS_Target=comp154430_c0_seq1 402 313 .;locus=RLOC_00018550
Chr2	stalkie_big_nohaplotig	exon	76617664	76618166	99	-	.	Parent=comp154430_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76617765	76617854	.	-	0	Parent=comp154430_c0_seq1.mrna1
Chr2	gffcl	locus	76660250	76661330	.	-	.	ID=RLOC_00018553;geneIDs=comp140424_c0_seq1.path1;transcripts=comp140424_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76660250	76661330	.	-	.	ID=comp140424_c0_seq1.mrna1;geneID=comp140424_c0_seq1.path1;Name=comp140424_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1069;mismatches=12;indels=1;unknowns=0;Target=comp140424_c0_seq1 1082 1 .;CDS_Target=comp140424_c0_seq1 916 830 .;locus=RLOC_00018553
Chr2	stalkie_big_nohaplotig	exon	76660250	76661330	98	-	.	Parent=comp140424_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76660416	76660502	.	-	0	Parent=comp140424_c0_seq1.mrna1
Chr2	gffcl	locus	76662076	76663029	.	+	.	ID=RLOC_00018554;geneIDs=FBgn0038706.4.path1;transcripts=FBgn0038706.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76662076	76663029	.	+	.	ID=FBgn0038706.4.mrna1;geneID=FBgn0038706.4.path1;Name=FBgn0038706.4;Dir=indeterminatecoverage=100.0;identity=99.7;matches=951;mismatches=3;indels=0;unknowns=0;Target=FBgn0038706.4 954 1 .;locus=RLOC_00018554
Chr2	stalkie_big_nohaplotig	exon	76662076	76663029	99	+	.	Parent=FBgn0038706.4.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76662076	76663029	.	+	0	Parent=FBgn0038706.4.mrna1
Chr2	gffcl	locus	76663870	76664949	.	+	.	ID=RLOC_00018555;geneIDs=FBgn0038706.1.path1;transcripts=FBgn0038706.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76663870	76664949	.	+	.	ID=FBgn0038706.1.mrna1;geneID=FBgn0038706.1.path1;Name=FBgn0038706.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1078;mismatches=2;indels=0;unknowns=0;Target=FBgn0038706.1 1080 1 .;locus=RLOC_00018555
Chr2	stalkie_big_nohaplotig	exon	76663870	76664949	99	+	.	Parent=FBgn0038706.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76663870	76664949	.	+	0	Parent=FBgn0038706.1.mrna1
Chr2	gffcl	locus	76666098	76667138	.	+	.	ID=RLOC_00018556;geneIDs=FBgn0038706.3.path1;transcripts=FBgn0038706.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76666098	76667138	.	+	.	ID=FBgn0038706.3.mrna1;geneID=FBgn0038706.3.path1;Name=FBgn0038706.3;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1039;mismatches=2;indels=0;unknowns=0;Target=FBgn0038706.3 1041 1 .;locus=RLOC_00018556
Chr2	stalkie_big_nohaplotig	exon	76666098	76667138	99	+	.	Parent=FBgn0038706.3.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76666098	76667138	.	+	0	Parent=FBgn0038706.3.mrna1
Chr2	gffcl	locus	76667551	76668609	.	+	.	ID=RLOC_00018557;geneIDs=FBgn0038706.2.path1;transcripts=FBgn0038706.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76667551	76668609	.	+	.	ID=FBgn0038706.2.mrna1;geneID=FBgn0038706.2.path1;Name=FBgn0038706.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1059;mismatches=0;indels=0;unknowns=0;Target=FBgn0038706.2 1059 1 .;locus=RLOC_00018557
Chr2	stalkie_big_nohaplotig	exon	76667551	76668609	100	+	.	Parent=FBgn0038706.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76667551	76668609	.	+	0	Parent=FBgn0038706.2.mrna1
Chr2	gffcl	locus	76692531	76692741	.	-	.	ID=RLOC_00018558;geneIDs=FBgn0051221.1.path1;transcripts=FBgn0051221.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76692531	76692741	.	-	.	ID=FBgn0051221.1.mrna1;geneID=FBgn0051221.1.path1;Name=FBgn0051221.1;Dir=indeterminatecoverage=30.8;identity=100.0;matches=211;mismatches=0;indels=0;unknowns=0;Target=FBgn0051221.1 211 1 .;locus=RLOC_00018558
Chr2	stalkie_big_nohaplotig	exon	76692531	76692741	100	-	.	Parent=FBgn0051221.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76692531	76692741	.	-	0	Parent=FBgn0051221.1.mrna1
Chr2	gffcl	locus	76729554	76786231	.	+	.	ID=RLOC_00018559;geneIDs=FBgn0086613.1.path1;transcripts=FBgn0086613.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76729554	76786231	.	+	.	ID=FBgn0086613.1.mrna1;geneID=FBgn0086613.1.path1;Name=FBgn0086613.1;Dir=sensecoverage=100.0;identity=99.7;matches=4748;mismatches=12;indels=1;unknowns=0;locus=RLOC_00018559
Chr2	stalkie_big_nohaplotig	exon	76729554	76729661	99	+	.	Parent=FBgn0086613.1.mrna1;Target=FBgn0086613.1 1 109 +
Chr2	stalkie_big_nohaplotig	exon	76729784	76729977	100	+	.	Parent=FBgn0086613.1.mrna1;Target=FBgn0086613.1 110 303 +
Chr2	stalkie_big_nohaplotig	exon	76730061	76731129	99	+	.	Parent=FBgn0086613.1.mrna1;Target=FBgn0086613.1 304 1372 +
Chr2	stalkie_big_nohaplotig	exon	76731185	76732223	99	+	.	Parent=FBgn0086613.1.mrna1;Target=FBgn0086613.1 1373 2411 +
Chr2	stalkie_big_nohaplotig	exon	76732294	76732494	100	+	.	Parent=FBgn0086613.1.mrna1;Target=FBgn0086613.1 2412 2612 +
Chr2	stalkie_big_nohaplotig	exon	76732566	76732743	99	+	.	Parent=FBgn0086613.1.mrna1;Target=FBgn0086613.1 2613 2790 +
Chr2	stalkie_big_nohaplotig	exon	76732858	76733228	99	+	.	Parent=FBgn0086613.1.mrna1;Target=FBgn0086613.1 2791 3161 +
Chr2	stalkie_big_nohaplotig	exon	76736438	76736699	100	+	.	Parent=FBgn0086613.1.mrna1;Target=FBgn0086613.1 3162 3423 +
Chr2	stalkie_big_nohaplotig	exon	76736757	76736924	99	+	.	Parent=FBgn0086613.1.mrna1;Target=FBgn0086613.1 3424 3591 +
Chr2	stalkie_big_nohaplotig	exon	76759472	76759630	100	+	.	Parent=FBgn0086613.1.mrna1;Target=FBgn0086613.1 3592 3750 +
Chr2	stalkie_big_nohaplotig	exon	76760458	76760560	100	+	.	Parent=FBgn0086613.1.mrna1;Target=FBgn0086613.1 3751 3853 +
Chr2	stalkie_big_nohaplotig	exon	76760654	76760742	100	+	.	Parent=FBgn0086613.1.mrna1;Target=FBgn0086613.1 3854 3942 +
Chr2	stalkie_big_nohaplotig	exon	76764196	76764469	100	+	.	Parent=FBgn0086613.1.mrna1;Target=FBgn0086613.1 3943 4216 +
Chr2	stalkie_big_nohaplotig	exon	76784181	76784396	100	+	.	Parent=FBgn0086613.1.mrna1;Target=FBgn0086613.1 4217 4432 +
Chr2	stalkie_big_nohaplotig	exon	76785903	76786231	100	+	.	Parent=FBgn0086613.1.mrna1;Target=FBgn0086613.1 4433 4761 +
Chr2	stalkie_big_nohaplotig	CDS	76729556	76729661	.	+	0	Parent=FBgn0086613.1.mrna1;Target=FBgn0086613.1 3 109 +
Chr2	stalkie_big_nohaplotig	CDS	76729784	76729814	.	+	2	Parent=FBgn0086613.1.mrna1;Target=FBgn0086613.1 110 140 +
Chr2	gffcl	locus	76737841	76738680	.	+	.	ID=RLOC_00018560;geneIDs=ORF2567.path1;transcripts=ORF2567.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76737841	76738680	.	+	.	ID=ORF2567.mrna1;geneID=ORF2567.path1;Name=ORF2567;Dir=indeterminatecoverage=100.0;identity=100.0;matches=840;mismatches=0;indels=0;unknowns=0;Target=ORF2567 840 1 .;locus=RLOC_00018560
Chr2	stalkie_big_nohaplotig	exon	76737841	76738680	100	+	.	Parent=ORF2567.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76737841	76738680	.	+	0	Parent=ORF2567.mrna1
Chr2	gffcl	locus	76745624	76747724	.	-	.	ID=RLOC_00018561;geneIDs=FBgn0038701.1.path1;transcripts=FBgn0038701.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76745624	76747724	.	-	.	ID=FBgn0038701.1.mrna1;geneID=FBgn0038701.1.path1;Name=FBgn0038701.1;Dir=sensecoverage=99.3;identity=99.9;matches=1523;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018561
Chr2	stalkie_big_nohaplotig	exon	76745624	76746257	99	-	.	Parent=FBgn0038701.1.mrna1;Target=FBgn0038701.1 903 1536 +
Chr2	stalkie_big_nohaplotig	exon	76746328	76746559	99	-	.	Parent=FBgn0038701.1.mrna1;Target=FBgn0038701.1 671 902 +
Chr2	stalkie_big_nohaplotig	exon	76746625	76746860	100	-	.	Parent=FBgn0038701.1.mrna1;Target=FBgn0038701.1 435 670 +
Chr2	stalkie_big_nohaplotig	exon	76746925	76747106	100	-	.	Parent=FBgn0038701.1.mrna1;Target=FBgn0038701.1 253 434 +
Chr2	stalkie_big_nohaplotig	exon	76747484	76747724	100	-	.	Parent=FBgn0038701.1.mrna1;Target=FBgn0038701.1 12 252 +
Chr2	stalkie_big_nohaplotig	CDS	76745624	76746257	.	-	1	Parent=FBgn0038701.1.mrna1;Target=FBgn0038701.1 903 1536 +
Chr2	stalkie_big_nohaplotig	CDS	76746328	76746559	.	-	2	Parent=FBgn0038701.1.mrna1;Target=FBgn0038701.1 671 902 +
Chr2	stalkie_big_nohaplotig	CDS	76746625	76746860	.	-	1	Parent=FBgn0038701.1.mrna1;Target=FBgn0038701.1 435 670 +
Chr2	stalkie_big_nohaplotig	CDS	76746925	76747106	.	-	0	Parent=FBgn0038701.1.mrna1;Target=FBgn0038701.1 253 434 +
Chr2	stalkie_big_nohaplotig	CDS	76747484	76747723	.	-	0	Parent=FBgn0038701.1.mrna1;Target=FBgn0038701.1 13 252 +
Chr2	gffcl	locus	76749164	76751381	.	-	.	ID=RLOC_00018562;geneIDs=FBgn0038700.1.path1;transcripts=FBgn0038700.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76749164	76751381	.	-	.	ID=FBgn0038700.1.mrna1;geneID=FBgn0038700.1.path1;Name=FBgn0038700.1;Dir=sensecoverage=100.0;identity=99.7;matches=1559;mismatches=4;indels=0;unknowns=0;locus=RLOC_00018562
Chr2	stalkie_big_nohaplotig	exon	76749164	76749333	100	-	.	Parent=FBgn0038700.1.mrna1;Target=FBgn0038700.1 1394 1563 +
Chr2	stalkie_big_nohaplotig	exon	76749403	76749693	100	-	.	Parent=FBgn0038700.1.mrna1;Target=FBgn0038700.1 1103 1393 +
Chr2	stalkie_big_nohaplotig	exon	76749752	76749918	98	-	.	Parent=FBgn0038700.1.mrna1;Target=FBgn0038700.1 936 1102 +
Chr2	stalkie_big_nohaplotig	exon	76749977	76750208	99	-	.	Parent=FBgn0038700.1.mrna1;Target=FBgn0038700.1 704 935 +
Chr2	stalkie_big_nohaplotig	exon	76750430	76750665	100	-	.	Parent=FBgn0038700.1.mrna1;Target=FBgn0038700.1 468 703 +
Chr2	stalkie_big_nohaplotig	exon	76750750	76750931	99	-	.	Parent=FBgn0038700.1.mrna1;Target=FBgn0038700.1 286 467 +
Chr2	stalkie_big_nohaplotig	exon	76751097	76751381	100	-	.	Parent=FBgn0038700.1.mrna1;Target=FBgn0038700.1 1 285 +
Chr2	stalkie_big_nohaplotig	CDS	76749164	76749333	.	-	2	Parent=FBgn0038700.1.mrna1;Target=FBgn0038700.1 1394 1563 +
Chr2	stalkie_big_nohaplotig	CDS	76749403	76749693	.	-	2	Parent=FBgn0038700.1.mrna1;Target=FBgn0038700.1 1103 1393 +
Chr2	stalkie_big_nohaplotig	CDS	76749752	76749918	.	-	1	Parent=FBgn0038700.1.mrna1;Target=FBgn0038700.1 936 1102 +
Chr2	stalkie_big_nohaplotig	CDS	76749977	76750208	.	-	2	Parent=FBgn0038700.1.mrna1;Target=FBgn0038700.1 704 935 +
Chr2	stalkie_big_nohaplotig	CDS	76750430	76750665	.	-	1	Parent=FBgn0038700.1.mrna1;Target=FBgn0038700.1 468 703 +
Chr2	stalkie_big_nohaplotig	CDS	76750750	76750931	.	-	0	Parent=FBgn0038700.1.mrna1;Target=FBgn0038700.1 286 467 +
Chr2	stalkie_big_nohaplotig	CDS	76751097	76751381	.	-	0	Parent=FBgn0038700.1.mrna1;Target=FBgn0038700.1 1 285 +
Chr2	gffcl	locus	76774911	76775696	.	+	.	ID=RLOC_00018563;geneIDs=FBgn0051245.2.path1;transcripts=FBgn0051245.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76774911	76775696	.	+	.	ID=FBgn0051245.2.mrna1;geneID=FBgn0051245.2.path1;Name=FBgn0051245.2;Dir=indeterminatecoverage=100.0;identity=99.7;matches=784;mismatches=2;indels=0;unknowns=0;Target=FBgn0051245.2 786 1 .;locus=RLOC_00018563
Chr2	stalkie_big_nohaplotig	exon	76774911	76775696	99	+	.	Parent=FBgn0051245.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76774911	76775696	.	+	0	Parent=FBgn0051245.2.mrna1
Chr2	gffcl	locus	76787754	76788555	.	+	.	ID=RLOC_00018564;geneIDs=comp158639_c0_seq1.path1;transcripts=comp158639_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76787754	76788555	.	+	.	ID=comp158639_c0_seq1.mrna1;geneID=comp158639_c0_seq1.path1;Name=comp158639_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.9;matches=778;mismatches=23;indels=46;unknowns=0;Target=comp158639_c0_seq1 846 1 .;CDS_Target=comp158639_c0_seq1 301 269 .;locus=RLOC_00018564
Chr2	stalkie_big_nohaplotig	exon	76787754	76788555	91	+	.	Parent=comp158639_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76788022	76788053	.	+	0	Parent=comp158639_c0_seq1.mrna1
Chr2	gffcl	locus	76827701	76828367	.	-	.	ID=RLOC_00018565;geneIDs=comp151506_c0_seq1.path1;transcripts=comp151506_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76827701	76828367	.	-	.	ID=comp151506_c0_seq1.mrna1;geneID=comp151506_c0_seq1.path1;Name=comp151506_c0_seq1;Dir=indeterminatecoverage=99.9;identity=92.8;matches=644;mismatches=21;indels=29;unknowns=0;Target=comp151506_c0_seq1 692 1 .;CDS_Target=comp151506_c0_seq1 414 313 .;locus=RLOC_00018565
Chr2	stalkie_big_nohaplotig	exon	76827701	76828367	92	-	.	Parent=comp151506_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76827959	76828060	.	-	0	Parent=comp151506_c0_seq1.mrna1
Chr2	gffcl	locus	76854527	76855141	.	+	.	ID=RLOC_00018566;geneIDs=FBgn0026316.1.path1;transcripts=FBgn0026316.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76854527	76855141	.	+	.	ID=FBgn0026316.1.mrna1;geneID=FBgn0026316.1.path1;Name=FBgn0026316.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=614;mismatches=1;indels=0;unknowns=0;Target=FBgn0026316.1 615 1 .;locus=RLOC_00018566
Chr2	stalkie_big_nohaplotig	exon	76854527	76855141	99	+	.	Parent=FBgn0026316.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76854527	76855141	.	+	0	Parent=FBgn0026316.1.mrna1
Chr2	gffcl	locus	76901930	76902964	.	-	.	ID=RLOC_00018567;geneIDs=comp146350_c0_seq1.path1;transcripts=comp146350_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76901930	76902964	.	-	.	ID=comp146350_c0_seq1.mrna1;geneID=comp146350_c0_seq1.path1;Name=comp146350_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.7;matches=1034;mismatches=0;indels=3;unknowns=0;Target=comp146350_c0_seq1 1046 11 .;CDS_Target=comp146350_c0_seq1 888 682 .;locus=RLOC_00018567
Chr2	stalkie_big_nohaplotig	exon	76901930	76902964	99	-	.	Parent=comp146350_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	76902088	76902294	.	-	0	Parent=comp146350_c0_seq1.mrna1
Chr2	gffcl	locus	76911217	76946479	.	+	.	ID=RLOC_00018568;geneIDs=FBgn0000463.1.path1;transcripts=FBgn0000463.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	76911217	76946479	.	+	.	ID=FBgn0000463.1.mrna1;geneID=FBgn0000463.1.path1;Name=FBgn0000463.1;Dir=sensecoverage=97.0;identity=99.9;matches=2482;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018568
Chr2	stalkie_big_nohaplotig	exon	76911217	76911528	100	+	.	Parent=FBgn0000463.1.mrna1;Target=FBgn0000463.1 79 390 +
Chr2	stalkie_big_nohaplotig	exon	76918617	76918683	100	+	.	Parent=FBgn0000463.1.mrna1;Target=FBgn0000463.1 391 457 +
Chr2	stalkie_big_nohaplotig	exon	76927574	76927822	100	+	.	Parent=FBgn0000463.1.mrna1;Target=FBgn0000463.1 458 706 +
Chr2	stalkie_big_nohaplotig	exon	76934871	76934925	100	+	.	Parent=FBgn0000463.1.mrna1;Target=FBgn0000463.1 707 761 +
Chr2	stalkie_big_nohaplotig	exon	76944679	76946479	99	+	.	Parent=FBgn0000463.1.mrna1;Target=FBgn0000463.1 762 2562 +
Chr2	stalkie_big_nohaplotig	CDS	76911217	76911528	.	+	0	Parent=FBgn0000463.1.mrna1;Target=FBgn0000463.1 79 390 +
Chr2	stalkie_big_nohaplotig	CDS	76918617	76918683	.	+	0	Parent=FBgn0000463.1.mrna1;Target=FBgn0000463.1 391 457 +
Chr2	stalkie_big_nohaplotig	CDS	76927574	76927822	.	+	2	Parent=FBgn0000463.1.mrna1;Target=FBgn0000463.1 458 706 +
Chr2	stalkie_big_nohaplotig	CDS	76934871	76934925	.	+	2	Parent=FBgn0000463.1.mrna1;Target=FBgn0000463.1 707 761 +
Chr2	stalkie_big_nohaplotig	CDS	76944679	76946479	.	+	1	Parent=FBgn0000463.1.mrna1;Target=FBgn0000463.1 762 2562 +
Chr2	gffcl	locus	77044912	77045586	.	-	.	ID=RLOC_00018569;geneIDs=FBgn0038695.path1;transcripts=FBgn0038695.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77044912	77045586	.	-	.	ID=FBgn0038695.mrna1;geneID=FBgn0038695.path1;Name=FBgn0038695;Dir=sensecoverage=100.0;identity=100.0;matches=483;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018569
Chr2	stalkie_big_nohaplotig	exon	77044912	77045165	100	-	.	Parent=FBgn0038695.mrna1;Target=FBgn0038695 230 483 +
Chr2	stalkie_big_nohaplotig	exon	77045287	77045404	100	-	.	Parent=FBgn0038695.mrna1;Target=FBgn0038695 112 229 +
Chr2	stalkie_big_nohaplotig	exon	77045476	77045586	100	-	.	Parent=FBgn0038695.mrna1;Target=FBgn0038695 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	77044912	77045165	.	-	2	Parent=FBgn0038695.mrna1;Target=FBgn0038695 230 483 +
Chr2	stalkie_big_nohaplotig	CDS	77045287	77045404	.	-	0	Parent=FBgn0038695.mrna1;Target=FBgn0038695 112 229 +
Chr2	stalkie_big_nohaplotig	CDS	77045476	77045586	.	-	0	Parent=FBgn0038695.mrna1;Target=FBgn0038695 1 111 +
Chr2	gffcl	locus	77067730	77068609	.	+	.	ID=RLOC_00018570;geneIDs=comp143579_c3_seq1.path1;transcripts=comp143579_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77067730	77068609	.	+	.	ID=comp143579_c3_seq1.mrna1;geneID=comp143579_c3_seq1.path1;Name=comp143579_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=874;mismatches=6;indels=0;unknowns=0;Target=comp143579_c3_seq1 880 1 .;CDS_Target=comp143579_c3_seq1 187 2 .;locus=RLOC_00018570
Chr2	stalkie_big_nohaplotig	exon	77067730	77068609	99	+	.	Parent=comp143579_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77067731	77067916	.	+	0	Parent=comp143579_c3_seq1.mrna1
Chr2	gffcl	locus	77072600	77084829	.	+	.	ID=RLOC_00018571;geneIDs=FBgn0038693.path1;transcripts=FBgn0038693.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77072600	77084829	.	+	.	ID=FBgn0038693.mrna1;geneID=FBgn0038693.path1;Name=FBgn0038693;Dir=sensecoverage=100.0;identity=99.8;matches=3077;mismatches=7;indels=0;unknowns=0;locus=RLOC_00018571
Chr2	stalkie_big_nohaplotig	exon	77072600	77072638	100	+	.	Parent=FBgn0038693.mrna1;Target=FBgn0038693 1 39 +
Chr2	stalkie_big_nohaplotig	exon	77072890	77072998	100	+	.	Parent=FBgn0038693.mrna1;Target=FBgn0038693 40 148 +
Chr2	stalkie_big_nohaplotig	exon	77073066	77073185	100	+	.	Parent=FBgn0038693.mrna1;Target=FBgn0038693 149 268 +
Chr2	stalkie_big_nohaplotig	exon	77073574	77073735	100	+	.	Parent=FBgn0038693.mrna1;Target=FBgn0038693 269 430 +
Chr2	stalkie_big_nohaplotig	exon	77073804	77073974	100	+	.	Parent=FBgn0038693.mrna1;Target=FBgn0038693 431 601 +
Chr2	stalkie_big_nohaplotig	exon	77074091	77074180	100	+	.	Parent=FBgn0038693.mrna1;Target=FBgn0038693 602 691 +
Chr2	stalkie_big_nohaplotig	exon	77074240	77074425	100	+	.	Parent=FBgn0038693.mrna1;Target=FBgn0038693 692 877 +
Chr2	stalkie_big_nohaplotig	exon	77074499	77075191	99	+	.	Parent=FBgn0038693.mrna1;Target=FBgn0038693 878 1570 +
Chr2	stalkie_big_nohaplotig	exon	77075249	77075337	100	+	.	Parent=FBgn0038693.mrna1;Target=FBgn0038693 1571 1659 +
Chr2	stalkie_big_nohaplotig	exon	77075399	77075951	99	+	.	Parent=FBgn0038693.mrna1;Target=FBgn0038693 1660 2212 +
Chr2	stalkie_big_nohaplotig	exon	77076524	77076795	100	+	.	Parent=FBgn0038693.mrna1;Target=FBgn0038693 2213 2484 +
Chr2	stalkie_big_nohaplotig	exon	77076854	77076955	100	+	.	Parent=FBgn0038693.mrna1;Target=FBgn0038693 2485 2586 +
Chr2	stalkie_big_nohaplotig	exon	77077028	77077172	100	+	.	Parent=FBgn0038693.mrna1;Target=FBgn0038693 2587 2731 +
Chr2	stalkie_big_nohaplotig	exon	77080504	77080583	100	+	.	Parent=FBgn0038693.mrna1;Target=FBgn0038693 2732 2811 +
Chr2	stalkie_big_nohaplotig	exon	77081142	77081204	100	+	.	Parent=FBgn0038693.mrna1;Target=FBgn0038693 2812 2874 +
Chr2	stalkie_big_nohaplotig	exon	77084557	77084665	100	+	.	Parent=FBgn0038693.mrna1;Target=FBgn0038693 2875 2983 +
Chr2	stalkie_big_nohaplotig	exon	77084729	77084829	100	+	.	Parent=FBgn0038693.mrna1;Target=FBgn0038693 2984 3084 +
Chr2	stalkie_big_nohaplotig	CDS	77072600	77072638	.	+	0	Parent=FBgn0038693.mrna1;Target=FBgn0038693 1 39 +
Chr2	stalkie_big_nohaplotig	CDS	77072890	77072998	.	+	0	Parent=FBgn0038693.mrna1;Target=FBgn0038693 40 148 +
Chr2	stalkie_big_nohaplotig	CDS	77073066	77073185	.	+	2	Parent=FBgn0038693.mrna1;Target=FBgn0038693 149 268 +
Chr2	stalkie_big_nohaplotig	CDS	77073574	77073735	.	+	2	Parent=FBgn0038693.mrna1;Target=FBgn0038693 269 430 +
Chr2	stalkie_big_nohaplotig	CDS	77073804	77073974	.	+	2	Parent=FBgn0038693.mrna1;Target=FBgn0038693 431 601 +
Chr2	stalkie_big_nohaplotig	CDS	77074091	77074180	.	+	2	Parent=FBgn0038693.mrna1;Target=FBgn0038693 602 691 +
Chr2	stalkie_big_nohaplotig	CDS	77074240	77074425	.	+	2	Parent=FBgn0038693.mrna1;Target=FBgn0038693 692 877 +
Chr2	stalkie_big_nohaplotig	CDS	77074499	77075191	.	+	2	Parent=FBgn0038693.mrna1;Target=FBgn0038693 878 1570 +
Chr2	stalkie_big_nohaplotig	CDS	77075249	77075337	.	+	2	Parent=FBgn0038693.mrna1;Target=FBgn0038693 1571 1659 +
Chr2	stalkie_big_nohaplotig	CDS	77075399	77075951	.	+	0	Parent=FBgn0038693.mrna1;Target=FBgn0038693 1660 2212 +
Chr2	stalkie_big_nohaplotig	CDS	77076524	77076795	.	+	2	Parent=FBgn0038693.mrna1;Target=FBgn0038693 2213 2484 +
Chr2	stalkie_big_nohaplotig	CDS	77076854	77076955	.	+	0	Parent=FBgn0038693.mrna1;Target=FBgn0038693 2485 2586 +
Chr2	stalkie_big_nohaplotig	CDS	77077028	77077172	.	+	0	Parent=FBgn0038693.mrna1;Target=FBgn0038693 2587 2731 +
Chr2	stalkie_big_nohaplotig	CDS	77080504	77080583	.	+	2	Parent=FBgn0038693.mrna1;Target=FBgn0038693 2732 2811 +
Chr2	stalkie_big_nohaplotig	CDS	77081142	77081204	.	+	0	Parent=FBgn0038693.mrna1;Target=FBgn0038693 2812 2874 +
Chr2	stalkie_big_nohaplotig	CDS	77084557	77084665	.	+	0	Parent=FBgn0038693.mrna1;Target=FBgn0038693 2875 2983 +
Chr2	stalkie_big_nohaplotig	CDS	77084729	77084829	.	+	2	Parent=FBgn0038693.mrna1;Target=FBgn0038693 2984 3084 +
Chr2	gffcl	locus	77096330	77097555	.	-	.	ID=RLOC_00018572;geneIDs=FBgn0038692.1.path1;transcripts=FBgn0038692.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77096330	77097555	.	-	.	ID=FBgn0038692.1.mrna1;geneID=FBgn0038692.1.path1;Name=FBgn0038692.1;Dir=sensecoverage=100.0;identity=99.9;matches=1103;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018572
Chr2	stalkie_big_nohaplotig	exon	77096330	77096515	100	-	.	Parent=FBgn0038692.1.mrna1;Target=FBgn0038692.1 919 1104 +
Chr2	stalkie_big_nohaplotig	exon	77096572	77097328	99	-	.	Parent=FBgn0038692.1.mrna1;Target=FBgn0038692.1 162 918 +
Chr2	stalkie_big_nohaplotig	exon	77097395	77097555	100	-	.	Parent=FBgn0038692.1.mrna1;Target=FBgn0038692.1 1 161 +
Chr2	stalkie_big_nohaplotig	CDS	77096330	77096515	.	-	0	Parent=FBgn0038692.1.mrna1;Target=FBgn0038692.1 919 1104 +
Chr2	stalkie_big_nohaplotig	CDS	77096572	77097328	.	-	1	Parent=FBgn0038692.1.mrna1;Target=FBgn0038692.1 162 918 +
Chr2	stalkie_big_nohaplotig	CDS	77097395	77097555	.	-	0	Parent=FBgn0038692.1.mrna1;Target=FBgn0038692.1 1 161 +
Chr2	gffcl	locus	77100230	77102708	.	+	.	ID=RLOC_00018573;geneIDs=FBgn0027090.1.path1;transcripts=FBgn0027090.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77100230	77102708	.	+	.	ID=FBgn0027090.1.mrna1;geneID=FBgn0027090.1.path1;Name=FBgn0027090.1;Dir=sensecoverage=100.0;identity=100.0;matches=2370;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018573
Chr2	stalkie_big_nohaplotig	exon	77100230	77100863	100	+	.	Parent=FBgn0027090.1.mrna1;Target=FBgn0027090.1 1 634 +
Chr2	stalkie_big_nohaplotig	exon	77100918	77101626	100	+	.	Parent=FBgn0027090.1.mrna1;Target=FBgn0027090.1 635 1343 +
Chr2	stalkie_big_nohaplotig	exon	77101682	77102708	100	+	.	Parent=FBgn0027090.1.mrna1;Target=FBgn0027090.1 1344 2370 +
Chr2	stalkie_big_nohaplotig	CDS	77100230	77100863	.	+	0	Parent=FBgn0027090.1.mrna1;Target=FBgn0027090.1 1 634 +
Chr2	stalkie_big_nohaplotig	CDS	77100918	77101626	.	+	2	Parent=FBgn0027090.1.mrna1;Target=FBgn0027090.1 635 1343 +
Chr2	stalkie_big_nohaplotig	CDS	77101682	77102708	.	+	1	Parent=FBgn0027090.1.mrna1;Target=FBgn0027090.1 1344 2370 +
Chr2	gffcl	locus	77103445	77103939	.	-	.	ID=RLOC_00018574;geneIDs=FBgn0039305.1.path1;transcripts=FBgn0039305.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77103445	77103939	.	-	.	ID=FBgn0039305.1.mrna1;geneID=FBgn0039305.1.path1;Name=FBgn0039305.1;Dir=sensecoverage=100.0;identity=100.0;matches=444;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018574
Chr2	stalkie_big_nohaplotig	exon	77103445	77103752	100	-	.	Parent=FBgn0039305.1.mrna1;Target=FBgn0039305.1 137 444 +
Chr2	stalkie_big_nohaplotig	exon	77103804	77103939	100	-	.	Parent=FBgn0039305.1.mrna1;Target=FBgn0039305.1 1 136 +
Chr2	stalkie_big_nohaplotig	CDS	77103445	77103752	.	-	2	Parent=FBgn0039305.1.mrna1;Target=FBgn0039305.1 137 444 +
Chr2	stalkie_big_nohaplotig	CDS	77103804	77103939	.	-	0	Parent=FBgn0039305.1.mrna1;Target=FBgn0039305.1 1 136 +
Chr2	gffcl	locus	77106925	77108186	.	+	.	ID=RLOC_00018575;geneIDs=FBgn0026250.1.path1;transcripts=FBgn0026250.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77106925	77108186	.	+	.	ID=FBgn0026250.1.mrna1;geneID=FBgn0026250.1.path1;Name=FBgn0026250.1;Dir=sensecoverage=100.0;identity=100.0;matches=450;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018575
Chr2	stalkie_big_nohaplotig	exon	77106925	77107134	100	+	.	Parent=FBgn0026250.1.mrna1;Target=FBgn0026250.1 1 210 +
Chr2	stalkie_big_nohaplotig	exon	77107947	77108186	100	+	.	Parent=FBgn0026250.1.mrna1;Target=FBgn0026250.1 211 450 +
Chr2	stalkie_big_nohaplotig	CDS	77106925	77107134	.	+	0	Parent=FBgn0026250.1.mrna1;Target=FBgn0026250.1 1 210 +
Chr2	stalkie_big_nohaplotig	CDS	77107947	77108186	.	+	0	Parent=FBgn0026250.1.mrna1;Target=FBgn0026250.1 211 450 +
Chr2	gffcl	locus	77108874	77109128	.	-	.	ID=RLOC_00018576;geneIDs=comp201181_c0_seq1.path1;transcripts=comp201181_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77108874	77109128	.	-	.	ID=comp201181_c0_seq1.mrna1;geneID=comp201181_c0_seq1.path1;Name=comp201181_c0_seq1;Dir=indeterminatecoverage=32.1;identity=99.2;matches=253;mismatches=2;indels=0;unknowns=0;Target=comp201181_c0_seq1 255 1 .;locus=RLOC_00018576
Chr2	stalkie_big_nohaplotig	exon	77108874	77109128	99	-	.	Parent=comp201181_c0_seq1.mrna1
Chr2	gffcl	locus	77115570	77116559	.	-	.	ID=RLOC_00018577;geneIDs=FBgn0038595.1.path1;transcripts=FBgn0038595.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77115570	77116559	.	-	.	ID=FBgn0038595.1.mrna1;geneID=FBgn0038595.1.path1;Name=FBgn0038595.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=988;mismatches=2;indels=0;unknowns=0;Target=FBgn0038595.1 990 1 .;locus=RLOC_00018577
Chr2	stalkie_big_nohaplotig	exon	77115570	77116559	99	-	.	Parent=FBgn0038595.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77115570	77116559	.	-	0	Parent=FBgn0038595.1.mrna1
Chr2	gffcl	locus	77121094	77121762	.	+	.	ID=RLOC_00018578;geneIDs=comp58208_c0_seq1.path1;transcripts=comp58208_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77121094	77121762	.	+	.	ID=comp58208_c0_seq1.mrna1;geneID=comp58208_c0_seq1.path1;Name=comp58208_c0_seq1;Dir=antisensecoverage=88.3;identity=99.8;matches=603;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018578
Chr2	stalkie_big_nohaplotig	exon	77121094	77121201	100	+	.	Parent=comp58208_c0_seq1.mrna1;Target=comp58208_c0_seq1 520 627 -
Chr2	stalkie_big_nohaplotig	exon	77121267	77121762	99	+	.	Parent=comp58208_c0_seq1.mrna1;Target=comp58208_c0_seq1 24 519 -
Chr2	stalkie_big_nohaplotig	CDS	77121197	77121201	.	+	0	Parent=comp58208_c0_seq1.mrna1;Target=comp58208_c0_seq1 520 524 .
Chr2	stalkie_big_nohaplotig	CDS	77121267	77121684	.	+	1	Parent=comp58208_c0_seq1.mrna1;Target=comp58208_c0_seq1 102 519 .
Chr2	gffcl	locus	77122639	77124792	.	+	.	ID=RLOC_00018579;geneIDs=FBgn0038598.1.path1,comp118820_c0_seq1.path1;transcripts=FBgn0038598.1.mrna1,comp118820_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77122639	77124792	.	+	.	ID=FBgn0038598.1.mrna1;geneID=FBgn0038598.1.path1;Name=FBgn0038598.1;Dir=sensecoverage=100.0;identity=99.9;matches=1594;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018579
Chr2	stalkie_big_nohaplotig	exon	77122639	77122694	100	+	.	Parent=FBgn0038598.1.mrna1;Target=FBgn0038598.1 1 56 +
Chr2	stalkie_big_nohaplotig	exon	77122769	77123795	99	+	.	Parent=FBgn0038598.1.mrna1;Target=FBgn0038598.1 57 1083 +
Chr2	stalkie_big_nohaplotig	exon	77124225	77124684	100	+	.	Parent=FBgn0038598.1.mrna1;Target=FBgn0038598.1 1084 1543 +
Chr2	stalkie_big_nohaplotig	exon	77124740	77124792	100	+	.	Parent=FBgn0038598.1.mrna1;Target=FBgn0038598.1 1544 1596 +
Chr2	stalkie_big_nohaplotig	CDS	77122639	77122694	.	+	0	Parent=FBgn0038598.1.mrna1;Target=FBgn0038598.1 1 56 +
Chr2	stalkie_big_nohaplotig	CDS	77122769	77123795	.	+	1	Parent=FBgn0038598.1.mrna1;Target=FBgn0038598.1 57 1083 +
Chr2	stalkie_big_nohaplotig	CDS	77124225	77124684	.	+	0	Parent=FBgn0038598.1.mrna1;Target=FBgn0038598.1 1084 1543 +
Chr2	stalkie_big_nohaplotig	CDS	77124740	77124792	.	+	2	Parent=FBgn0038598.1.mrna1;Target=FBgn0038598.1 1544 1596 +
Chr2	stalkie_big_nohaplotig	mRNA	77124042	77124245	.	+	.	ID=comp118820_c0_seq1.mrna1;geneID=comp118820_c0_seq1.path1;Name=comp118820_c0_seq1;Dir=indeterminatecoverage=95.3;identity=98.0;matches=200;mismatches=4;indels=0;unknowns=0;Target=comp118820_c0_seq1 214 11 .;CDS_Target=comp118820_c0_seq1 96 13 .;locus=RLOC_00018579
Chr2	stalkie_big_nohaplotig	exon	77124042	77124245	98	+	.	Parent=comp118820_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77124044	77124127	.	+	0	Parent=comp118820_c0_seq1.mrna1
Chr2	gffcl	locus	77125068	77127983	.	-	.	ID=RLOC_00018580;geneIDs=FBgn0038597.1.path2;transcripts=FBgn0038597.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	77125068	77127983	.	-	.	ID=FBgn0038597.1.mrna2;geneID=FBgn0038597.1.path2;Name=FBgn0038597.1;Dir=sensecoverage=100.0;identity=99.7;matches=2792;mismatches=7;indels=0;unknowns=0;locus=RLOC_00018580
Chr2	stalkie_big_nohaplotig	exon	77125068	77125843	99	-	.	Parent=FBgn0038597.1.mrna2;Target=FBgn0038597.1 2024 2799 +
Chr2	stalkie_big_nohaplotig	exon	77125904	77127720	99	-	.	Parent=FBgn0038597.1.mrna2;Target=FBgn0038597.1 207 2023 +
Chr2	stalkie_big_nohaplotig	exon	77127778	77127983	100	-	.	Parent=FBgn0038597.1.mrna2;Target=FBgn0038597.1 1 206 +
Chr2	stalkie_big_nohaplotig	CDS	77125068	77125843	.	-	2	Parent=FBgn0038597.1.mrna2;Target=FBgn0038597.1 2024 2799 +
Chr2	stalkie_big_nohaplotig	CDS	77125904	77127720	.	-	1	Parent=FBgn0038597.1.mrna2;Target=FBgn0038597.1 207 2023 +
Chr2	stalkie_big_nohaplotig	CDS	77127778	77127983	.	-	0	Parent=FBgn0038597.1.mrna2;Target=FBgn0038597.1 1 206 +
Chr2	gffcl	locus	77142622	77144056	.	+	.	ID=RLOC_00018581;geneIDs=FBgn0027378.1.path1;transcripts=FBgn0027378.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77142622	77144056	.	+	.	ID=FBgn0027378.1.mrna1;geneID=FBgn0027378.1.path1;Name=FBgn0027378.1;Dir=sensecoverage=100.0;identity=100.0;matches=1266;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018581
Chr2	stalkie_big_nohaplotig	exon	77142622	77142736	100	+	.	Parent=FBgn0027378.1.mrna1;Target=FBgn0027378.1 1 115 +
Chr2	stalkie_big_nohaplotig	exon	77142800	77142917	100	+	.	Parent=FBgn0027378.1.mrna1;Target=FBgn0027378.1 116 233 +
Chr2	stalkie_big_nohaplotig	exon	77142974	77143086	100	+	.	Parent=FBgn0027378.1.mrna1;Target=FBgn0027378.1 234 346 +
Chr2	stalkie_big_nohaplotig	exon	77143137	77144056	100	+	.	Parent=FBgn0027378.1.mrna1;Target=FBgn0027378.1 347 1266 +
Chr2	stalkie_big_nohaplotig	CDS	77142622	77142736	.	+	0	Parent=FBgn0027378.1.mrna1;Target=FBgn0027378.1 1 115 +
Chr2	stalkie_big_nohaplotig	CDS	77142800	77142917	.	+	2	Parent=FBgn0027378.1.mrna1;Target=FBgn0027378.1 116 233 +
Chr2	stalkie_big_nohaplotig	CDS	77142974	77143086	.	+	1	Parent=FBgn0027378.1.mrna1;Target=FBgn0027378.1 234 346 +
Chr2	stalkie_big_nohaplotig	CDS	77143137	77144056	.	+	2	Parent=FBgn0027378.1.mrna1;Target=FBgn0027378.1 347 1266 +
Chr2	gffcl	locus	77144529	77145314	.	-	.	ID=RLOC_00018582;geneIDs=FBgn0038313.1.path1;transcripts=FBgn0038313.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77144529	77145314	.	-	.	ID=FBgn0038313.1.mrna1;geneID=FBgn0038313.1.path1;Name=FBgn0038313.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=785;mismatches=1;indels=0;unknowns=0;Target=FBgn0038313.1 786 1 .;locus=RLOC_00018582
Chr2	stalkie_big_nohaplotig	exon	77144529	77145314	99	-	.	Parent=FBgn0038313.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77144529	77145314	.	-	0	Parent=FBgn0038313.1.mrna1
Chr2	gffcl	locus	77162712	77203404	.	+	.	ID=RLOC_00018583;geneIDs=ORF3228.path1,FBgn0003721.2.path1,comp63748_c0_seq1.path1,comp77739_c0_seq1.path1,comp115047_c0_seq1.path1,comp135154_c0_seq1.path1,comp147668_c0_seq1.path1,comp149645_c0_seq1.path1,comp150179_c0_seq1.path1,comp153108_c0_seq1.path1,comp155394_c0_seq1.path1,comp156844_c0_seq1.path1,comp157062_c0_seq1.path1;transcripts=FBgn0003721.2.mrna1,comp150179_c0_seq1.mrna1,comp157062_c0_seq1.mrna1,comp155394_c0_seq1.mrna1,comp77739_c0_seq1.mrna1,comp153108_c0_seq1.mrna1,comp149645_c0_seq1.mrna1,comp63748_c0_seq1.mrna1,ORF3228.mrna1,comp147668_c0_seq1.mrna1,comp115047_c0_seq1.mrna1,comp156844_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77162712	77202570	.	+	.	ID=FBgn0003721.2.mrna1;geneID=FBgn0003721.2.path1;Name=FBgn0003721.2;Dir=sensecoverage=100.0;identity=99.9;matches=860;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018583
Chr2	stalkie_big_nohaplotig	exon	77162712	77162831	100	+	.	Parent=FBgn0003721.2.mrna1;Target=FBgn0003721.2 1 120 +
Chr2	stalkie_big_nohaplotig	exon	77163012	77163137	100	+	.	Parent=FBgn0003721.2.mrna1;Target=FBgn0003721.2 121 246 +
Chr2	stalkie_big_nohaplotig	exon	77180224	77180357	100	+	.	Parent=FBgn0003721.2.mrna1;Target=FBgn0003721.2 247 380 +
Chr2	stalkie_big_nohaplotig	exon	77182530	77182647	100	+	.	Parent=FBgn0003721.2.mrna1;Target=FBgn0003721.2 381 498 +
Chr2	stalkie_big_nohaplotig	exon	77188875	77188945	100	+	.	Parent=FBgn0003721.2.mrna1;Target=FBgn0003721.2 499 569 +
Chr2	stalkie_big_nohaplotig	exon	77190869	77190944	98	+	.	Parent=FBgn0003721.2.mrna1;Target=FBgn0003721.2 570 645 +
Chr2	stalkie_big_nohaplotig	exon	77191133	77191195	100	+	.	Parent=FBgn0003721.2.mrna1;Target=FBgn0003721.2 646 708 +
Chr2	stalkie_big_nohaplotig	exon	77195505	77195574	100	+	.	Parent=FBgn0003721.2.mrna1;Target=FBgn0003721.2 709 778 +
Chr2	stalkie_big_nohaplotig	exon	77202488	77202570	100	+	.	Parent=FBgn0003721.2.mrna1;Target=FBgn0003721.2 779 861 +
Chr2	stalkie_big_nohaplotig	CDS	77162712	77162831	.	+	0	Parent=FBgn0003721.2.mrna1;Target=FBgn0003721.2 1 120 +
Chr2	stalkie_big_nohaplotig	CDS	77163012	77163137	.	+	0	Parent=FBgn0003721.2.mrna1;Target=FBgn0003721.2 121 246 +
Chr2	stalkie_big_nohaplotig	CDS	77180224	77180357	.	+	0	Parent=FBgn0003721.2.mrna1;Target=FBgn0003721.2 247 380 +
Chr2	stalkie_big_nohaplotig	CDS	77182530	77182647	.	+	1	Parent=FBgn0003721.2.mrna1;Target=FBgn0003721.2 381 498 +
Chr2	stalkie_big_nohaplotig	CDS	77188875	77188945	.	+	0	Parent=FBgn0003721.2.mrna1;Target=FBgn0003721.2 499 569 +
Chr2	stalkie_big_nohaplotig	CDS	77190869	77190944	.	+	1	Parent=FBgn0003721.2.mrna1;Target=FBgn0003721.2 570 645 +
Chr2	stalkie_big_nohaplotig	CDS	77191133	77191195	.	+	0	Parent=FBgn0003721.2.mrna1;Target=FBgn0003721.2 646 708 +
Chr2	stalkie_big_nohaplotig	CDS	77195505	77195574	.	+	0	Parent=FBgn0003721.2.mrna1;Target=FBgn0003721.2 709 778 +
Chr2	stalkie_big_nohaplotig	CDS	77202488	77202570	.	+	2	Parent=FBgn0003721.2.mrna1;Target=FBgn0003721.2 779 861 +
Chr2	stalkie_big_nohaplotig	mRNA	77179522	77180245	.	+	.	ID=comp150179_c0_seq1.mrna1;geneID=comp150179_c0_seq1.path1;Name=comp150179_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=718;mismatches=5;indels=6;unknowns=0;Target=comp150179_c0_seq1 728 1 .;CDS_Target=comp150179_c0_seq1 124 2 .;locus=RLOC_00018583
Chr2	stalkie_big_nohaplotig	exon	77179522	77180245	98	+	.	Parent=comp150179_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77179523	77179645	.	+	0	Parent=comp150179_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77181177	77182551	.	+	.	ID=comp157062_c0_seq1.mrna1;geneID=comp157062_c0_seq1.path1;Name=comp157062_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.5;matches=1364;mismatches=5;indels=16;unknowns=0;Target=comp157062_c0_seq1 1489 1382 .;locus=RLOC_00018583
Chr2	stalkie_big_nohaplotig	exon	77181177	77181596	100	+	.	Parent=comp157062_c0_seq1.mrna1;Target=comp157062_c0_seq1 425 6 .
Chr2	stalkie_big_nohaplotig	exon	77181604	77182551	97	+	.	Parent=comp157062_c0_seq1.mrna1;Target=comp157062_c0_seq1 1491 528 .
Chr2	stalkie_big_nohaplotig	CDS	77182442	77182549	.	+	0	Parent=comp157062_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77183875	77185796	.	+	.	ID=comp155394_c0_seq1.mrna1;geneID=comp155394_c0_seq1.path1;Name=comp155394_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.9;matches=1912;mismatches=10;indels=11;unknowns=0;Target=comp155394_c0_seq1 1935 3 .;CDS_Target=comp155394_c0_seq1 1550 1446 .;locus=RLOC_00018583
Chr2	stalkie_big_nohaplotig	exon	77183875	77185796	98	+	.	Parent=comp155394_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77185307	77185411	.	+	0	Parent=comp155394_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77188230	77188895	.	+	.	ID=comp77739_c0_seq1.mrna1;geneID=comp77739_c0_seq1.path1;Name=comp77739_c0_seq1;Dir=indeterminatecoverage=95.7;identity=100.0;matches=666;mismatches=0;indels=0;unknowns=0;Target=comp77739_c0_seq1 696 31 .;CDS_Target=comp77739_c0_seq1 600 493 .;locus=RLOC_00018583
Chr2	stalkie_big_nohaplotig	exon	77188230	77188895	100	+	.	Parent=comp77739_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77188692	77188799	.	+	0	Parent=comp77739_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77190013	77190889	.	+	.	ID=comp153108_c0_seq1.mrna1;geneID=comp153108_c0_seq1.path1;Name=comp153108_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=873;mismatches=4;indels=0;unknowns=0;Target=comp153108_c0_seq1 877 1 .;CDS_Target=comp153108_c0_seq1 179 60 .;locus=RLOC_00018583
Chr2	stalkie_big_nohaplotig	exon	77190013	77190889	99	+	.	Parent=comp153108_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77190072	77190191	.	+	0	Parent=comp153108_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77195551	77196374	.	+	.	ID=comp149645_c0_seq1.mrna1;geneID=comp149645_c0_seq1.path1;Name=comp149645_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.6;matches=821;mismatches=3;indels=0;unknowns=0;Target=comp149645_c0_seq1 824 1 .;CDS_Target=comp149645_c0_seq1 78 1 .;locus=RLOC_00018583
Chr2	stalkie_big_nohaplotig	exon	77195551	77196374	99	+	.	Parent=comp149645_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77195551	77195628	.	+	0	Parent=comp149645_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77195552	77203404	.	+	.	ID=comp63748_c0_seq1.mrna1;geneID=comp63748_c0_seq1.path1;Name=comp63748_c0_seq1;Dir=sensecoverage=99.7;identity=98.7;matches=382;mismatches=0;indels=5;unknowns=0;locus=RLOC_00018583
Chr2	stalkie_big_nohaplotig	exon	77195552	77195574	100	+	.	Parent=comp63748_c0_seq1.mrna1;Target=comp63748_c0_seq1 1 23 +
Chr2	stalkie_big_nohaplotig	exon	77203046	77203404	98	+	.	Parent=comp63748_c0_seq1.mrna1;Target=comp63748_c0_seq1 24 387 +
Chr2	stalkie_big_nohaplotig	CDS	77195553	77195574	.	+	0	Parent=comp63748_c0_seq1.mrna1;Target=comp63748_c0_seq1 2 23 +
Chr2	stalkie_big_nohaplotig	CDS	77203046	77203122	.	+	2	Parent=comp63748_c0_seq1.mrna1;Target=comp63748_c0_seq1 24 100 +
Chr2	stalkie_big_nohaplotig	mRNA	77195559	77201272	.	+	.	ID=ORF3228.mrna1;geneID=ORF3228.path1;Name=ORF3228;Dir=sensecoverage=100.0;identity=100.0;matches=753;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018583
Chr2	stalkie_big_nohaplotig	exon	77195559	77195574	100	+	.	Parent=ORF3228.mrna1;Target=ORF3228 1 16 +
Chr2	stalkie_big_nohaplotig	exon	77200536	77201272	100	+	.	Parent=ORF3228.mrna1;Target=ORF3228 17 753 +
Chr2	stalkie_big_nohaplotig	CDS	77195559	77195574	.	+	0	Parent=ORF3228.mrna1;Target=ORF3228 1 16 +
Chr2	stalkie_big_nohaplotig	CDS	77200536	77201272	.	+	2	Parent=ORF3228.mrna1;Target=ORF3228 17 753 +
Chr2	stalkie_big_nohaplotig	mRNA	77199742	77200557	.	+	.	ID=comp147668_c0_seq1.mrna1;geneID=comp147668_c0_seq1.path1;Name=comp147668_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=816;mismatches=0;indels=0;unknowns=0;Target=comp147668_c0_seq1 816 1 .;CDS_Target=comp147668_c0_seq1 379 2 .;locus=RLOC_00018583
Chr2	stalkie_big_nohaplotig	exon	77199742	77200557	100	+	.	Parent=comp147668_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77199743	77200120	.	+	0	Parent=comp147668_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77201366	77202507	.	+	.	ID=comp115047_c0_seq1.mrna1;geneID=comp115047_c0_seq1.path1;Name=comp115047_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=209;mismatches=0;indels=1;unknowns=0;Target=comp115047_c0_seq1 5 115 +;locus=RLOC_00018583
Chr2	stalkie_big_nohaplotig	exon	77201366	77201554	99	+	.	Parent=comp115047_c0_seq1.mrna1;Target=comp115047_c0_seq1 1 190 +
Chr2	stalkie_big_nohaplotig	exon	77202488	77202507	100	+	.	Parent=comp115047_c0_seq1.mrna1;Target=comp115047_c0_seq1 191 210 +
Chr2	stalkie_big_nohaplotig	CDS	77201370	77201479	.	+	0	Parent=comp115047_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77201531	77202508	.	+	.	ID=comp156844_c0_seq1.mrna1;geneID=comp156844_c0_seq1.path1;Name=comp156844_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=952;mismatches=2;indels=26;unknowns=0;Target=comp156844_c0_seq1 956 1 .;CDS_Target=comp156844_c0_seq1 413 240 .;locus=RLOC_00018583
Chr2	stalkie_big_nohaplotig	exon	77201531	77202508	97	+	.	Parent=comp156844_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77201794	77201967	.	+	0	Parent=comp156844_c0_seq1.mrna1
Chr2	gffcl	locus	77166885	77168705	.	+	.	ID=RLOC_00018584;geneIDs=FBgn0003721.1.path1;transcripts=FBgn0003721.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77166885	77168705	.	+	.	ID=FBgn0003721.1.mrna1;geneID=FBgn0003721.1.path1;Name=FBgn0003721.1;Dir=indeterminatecoverage=98.9;identity=99.7;matches=1815;mismatches=6;indels=0;unknowns=0;Target=FBgn0003721.1 1821 1 .;locus=RLOC_00018584
Chr2	stalkie_big_nohaplotig	exon	77166885	77168705	99	+	.	Parent=FBgn0003721.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77166885	77168705	.	+	0	Parent=FBgn0003721.1.mrna1
Chr2	gffcl	locus	77170520	77172495	.	-	.	ID=RLOC_00018585;geneIDs=comp156747_c0_seq1.path1;transcripts=comp156747_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77170520	77172495	.	-	.	ID=comp156747_c0_seq1.mrna1;geneID=comp156747_c0_seq1.path1;Name=comp156747_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.4;matches=1959;mismatches=9;indels=23;unknowns=0;Target=comp156747_c0_seq1 1983 1 .;CDS_Target=comp156747_c0_seq1 1510 1394 .;locus=RLOC_00018585
Chr2	stalkie_big_nohaplotig	exon	77170520	77172495	98	-	.	Parent=comp156747_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77170993	77171109	.	-	0	Parent=comp156747_c0_seq1.mrna1
Chr2	gffcl	locus	77174064	77174685	.	-	.	ID=RLOC_00018586;geneIDs=comp142733_c0_seq1.path1;transcripts=comp142733_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77174064	77174685	.	-	.	ID=comp142733_c0_seq1.mrna1;geneID=comp142733_c0_seq1.path1;Name=comp142733_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=618;mismatches=4;indels=0;unknowns=0;Target=comp142733_c0_seq1 622 1 .;CDS_Target=comp142733_c0_seq1 622 554 .;locus=RLOC_00018586
Chr2	stalkie_big_nohaplotig	exon	77174064	77174685	99	-	.	Parent=comp142733_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77174064	77174132	.	-	0	Parent=comp142733_c0_seq1.mrna1
Chr2	gffcl	locus	77176492	77177093	.	-	.	ID=RLOC_00018587;geneIDs=comp96010_c0_seq1.path1;transcripts=comp96010_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77176492	77177093	.	-	.	ID=comp96010_c0_seq1.mrna1;geneID=comp96010_c0_seq1.path1;Name=comp96010_c0_seq1;Dir=indeterminatecoverage=90.0;identity=99.5;matches=599;mismatches=3;indels=0;unknowns=0;Target=comp96010_c0_seq1 669 68 .;CDS_Target=comp96010_c0_seq1 444 331 .;locus=RLOC_00018587
Chr2	stalkie_big_nohaplotig	exon	77176492	77177093	99	-	.	Parent=comp96010_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77176717	77176830	.	-	0	Parent=comp96010_c0_seq1.mrna1
Chr2	gffcl	locus	77177181	77178402	.	-	.	ID=RLOC_00018588;geneIDs=comp156034_c0_seq1.path1;transcripts=comp156034_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77177181	77178402	.	-	.	ID=comp156034_c0_seq1.mrna1;geneID=comp156034_c0_seq1.path1;Name=comp156034_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.4;matches=1219;mismatches=3;indels=4;unknowns=0;Target=comp156034_c0_seq1 1227 2 .;CDS_Target=comp156034_c0_seq1 853 701 .;locus=RLOC_00018588
Chr2	stalkie_big_nohaplotig	exon	77177181	77178402	99	-	.	Parent=comp156034_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77177555	77177707	.	-	0	Parent=comp156034_c0_seq1.mrna1
Chr2	gffcl	locus	77178587	77179381	.	+	.	ID=RLOC_00018589;geneIDs=comp146550_c0_seq1.path1;transcripts=comp146550_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77178587	77179381	.	+	.	ID=comp146550_c0_seq1.mrna1;geneID=comp146550_c0_seq1.path1;Name=comp146550_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=790;mismatches=5;indels=7;unknowns=0;Target=comp146550_c0_seq1 802 1 .;CDS_Target=comp146550_c0_seq1 446 306 .;locus=RLOC_00018589
Chr2	stalkie_big_nohaplotig	exon	77178587	77179381	98	+	.	Parent=comp146550_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77178885	77179025	.	+	0	Parent=comp146550_c0_seq1.mrna1
Chr2	gffcl	locus	77180701	77181018	.	+	.	ID=RLOC_00018590;geneIDs=comp112614_c1_seq1.path1;transcripts=comp112614_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77180701	77181018	.	+	.	ID=comp112614_c1_seq1.mrna1;geneID=comp112614_c1_seq1.path1;Name=comp112614_c1_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=318;mismatches=0;indels=0;unknowns=0;Target=comp112614_c1_seq1 318 1 .;CDS_Target=comp112614_c1_seq1 171 64 .;locus=RLOC_00018590
Chr2	stalkie_big_nohaplotig	exon	77180701	77181018	100	+	.	Parent=comp112614_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77180764	77180871	.	+	0	Parent=comp112614_c1_seq1.mrna1
Chr2	gffcl	locus	77186010	77187948	.	-	.	ID=RLOC_00018591;geneIDs=comp158797_c0_seq1.path1;transcripts=comp158797_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77186010	77187948	.	-	.	ID=comp158797_c0_seq1.mrna1;geneID=comp158797_c0_seq1.path1;Name=comp158797_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1939;mismatches=0;indels=0;unknowns=0;Target=comp158797_c0_seq1 1939 1 .;CDS_Target=comp158797_c0_seq1 967 764 .;locus=RLOC_00018591
Chr2	stalkie_big_nohaplotig	exon	77186010	77187948	100	-	.	Parent=comp158797_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77186982	77187185	.	-	0	Parent=comp158797_c0_seq1.mrna1
Chr2	gffcl	locus	77191197	77191449	.	-	.	ID=RLOC_00018592;geneIDs=comp119223_c1_seq1.path1;transcripts=comp119223_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77191197	77191449	.	-	.	ID=comp119223_c1_seq1.mrna1;geneID=comp119223_c1_seq1.path1;Name=comp119223_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=253;mismatches=0;indels=0;unknowns=0;Target=comp119223_c1_seq1 253 1 .;CDS_Target=comp119223_c1_seq1 49 2 .;locus=RLOC_00018592
Chr2	stalkie_big_nohaplotig	exon	77191197	77191449	100	-	.	Parent=comp119223_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77191401	77191448	.	-	0	Parent=comp119223_c1_seq1.mrna1
Chr2	gffcl	locus	77191928	77192247	.	+	.	ID=RLOC_00018593;geneIDs=comp118232_c0_seq1.path1;transcripts=comp118232_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77191928	77192247	.	+	.	ID=comp118232_c0_seq1.mrna1;geneID=comp118232_c0_seq1.path1;Name=comp118232_c0_seq1;Dir=indeterminatecoverage=92.8;identity=99.7;matches=319;mismatches=1;indels=0;unknowns=0;Target=comp118232_c0_seq1 320 1 .;CDS_Target=comp118232_c0_seq1 318 1 .;locus=RLOC_00018593
Chr2	stalkie_big_nohaplotig	exon	77191928	77192247	99	+	.	Parent=comp118232_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77191928	77192245	.	+	0	Parent=comp118232_c0_seq1.mrna1
Chr2	gffcl	locus	77192324	77193889	.	-	.	ID=RLOC_00018594;geneIDs=comp159411_c0_seq1.path1;transcripts=comp159411_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77192324	77193889	.	-	.	ID=comp159411_c0_seq1.mrna1;geneID=comp159411_c0_seq1.path1;Name=comp159411_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=1553;mismatches=5;indels=18;unknowns=0;Target=comp159411_c0_seq1 1568 1 .;CDS_Target=comp159411_c0_seq1 751 647 .;locus=RLOC_00018594
Chr2	stalkie_big_nohaplotig	exon	77192324	77193889	98	-	.	Parent=comp159411_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77193139	77193243	.	-	0	Parent=comp159411_c0_seq1.mrna1
Chr2	gffcl	locus	77196378	77197048	.	-	.	ID=RLOC_00018595;geneIDs=comp116374_c0_seq1.path1;transcripts=comp116374_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77196378	77197048	.	-	.	ID=comp116374_c0_seq1.mrna1;geneID=comp116374_c0_seq1.path1;Name=comp116374_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.9;matches=670;mismatches=1;indels=0;unknowns=0;Target=comp116374_c0_seq1 676 6 .;CDS_Target=comp116374_c0_seq1 311 225 .;locus=RLOC_00018595
Chr2	stalkie_big_nohaplotig	exon	77196378	77197048	99	-	.	Parent=comp116374_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77196743	77196829	.	-	0	Parent=comp116374_c0_seq1.mrna1
Chr2	gffcl	locus	77198692	77199024	.	+	.	ID=RLOC_00018596;geneIDs=comp142433_c1_seq1.path1;transcripts=comp142433_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77198692	77199024	.	+	.	ID=comp142433_c1_seq1.mrna1;geneID=comp142433_c1_seq1.path1;Name=comp142433_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=331;mismatches=2;indels=0;unknowns=0;Target=comp142433_c1_seq1 333 1 .;CDS_Target=comp142433_c1_seq1 49 2 .;locus=RLOC_00018596
Chr2	stalkie_big_nohaplotig	exon	77198692	77199024	99	+	.	Parent=comp142433_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77198693	77198740	.	+	0	Parent=comp142433_c1_seq1.mrna1
Chr2	gffcl	locus	77203473	77204784	.	+	.	ID=RLOC_00018597;geneIDs=comp160149_c0_seq1.path1;transcripts=comp160149_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77203473	77204784	.	+	.	ID=comp160149_c0_seq1.mrna1;geneID=comp160149_c0_seq1.path1;Name=comp160149_c0_seq1;Dir=indeterminatecoverage=98.1;identity=98.5;matches=1298;mismatches=14;indels=6;unknowns=0;Target=comp160149_c0_seq1 1318 1 .;CDS_Target=comp160149_c0_seq1 866 597 .;locus=RLOC_00018597
Chr2	stalkie_big_nohaplotig	exon	77203473	77204784	98	+	.	Parent=comp160149_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77204069	77204338	.	+	0	Parent=comp160149_c0_seq1.mrna1
Chr2	gffcl	locus	77220362	77223693	.	.	.	ID=RLOC_00018598;geneIDs=FBgn0004117.1.path1,comp110904_c0_seq1.path1;transcripts=FBgn0004117.1.mrna1,comp110904_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77220362	77223693	.	+	.	ID=FBgn0004117.1.mrna1;geneID=FBgn0004117.1.path1;Name=FBgn0004117.1;Dir=sensecoverage=100.0;identity=100.0;matches=870;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018598
Chr2	stalkie_big_nohaplotig	exon	77220362	77220753	100	+	.	Parent=FBgn0004117.1.mrna1;Target=FBgn0004117.1 1 392 +
Chr2	stalkie_big_nohaplotig	exon	77220819	77221038	100	+	.	Parent=FBgn0004117.1.mrna1;Target=FBgn0004117.1 393 612 +
Chr2	stalkie_big_nohaplotig	exon	77221097	77221274	100	+	.	Parent=FBgn0004117.1.mrna1;Target=FBgn0004117.1 613 790 +
Chr2	stalkie_big_nohaplotig	exon	77223614	77223693	100	+	.	Parent=FBgn0004117.1.mrna1;Target=FBgn0004117.1 791 870 +
Chr2	stalkie_big_nohaplotig	CDS	77220362	77220753	.	+	0	Parent=FBgn0004117.1.mrna1;Target=FBgn0004117.1 1 392 +
Chr2	stalkie_big_nohaplotig	CDS	77220819	77221038	.	+	1	Parent=FBgn0004117.1.mrna1;Target=FBgn0004117.1 393 612 +
Chr2	stalkie_big_nohaplotig	CDS	77221097	77221274	.	+	0	Parent=FBgn0004117.1.mrna1;Target=FBgn0004117.1 613 790 +
Chr2	stalkie_big_nohaplotig	CDS	77223614	77223693	.	+	2	Parent=FBgn0004117.1.mrna1;Target=FBgn0004117.1 791 870 +
Chr2	stalkie_big_nohaplotig	mRNA	77223343	77223659	.	-	.	ID=comp110904_c0_seq1.mrna1;geneID=comp110904_c0_seq1.path1;Name=comp110904_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.1;matches=304;mismatches=5;indels=14;unknowns=0;Target=comp110904_c0_seq1 315 1 .;CDS_Target=comp110904_c0_seq1 66 1 .;locus=RLOC_00018598
Chr2	stalkie_big_nohaplotig	exon	77223343	77223659	94	-	.	Parent=comp110904_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77223594	77223659	.	-	0	Parent=comp110904_c0_seq1.mrna1
Chr2	gffcl	locus	77222134	77223019	.	-	.	ID=RLOC_00018599;geneIDs=comp156734_c0_seq1.path1;transcripts=comp156734_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77222134	77223019	.	-	.	ID=comp156734_c0_seq1.mrna1;geneID=comp156734_c0_seq1.path1;Name=comp156734_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=884;mismatches=2;indels=1;unknowns=0;Target=comp156734_c0_seq1 887 1 .;CDS_Target=comp156734_c0_seq1 371 273 .;locus=RLOC_00018599
Chr2	stalkie_big_nohaplotig	exon	77222134	77223019	99	-	.	Parent=comp156734_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77222649	77222747	.	-	0	Parent=comp156734_c0_seq1.mrna1
Chr2	gffcl	locus	77232019	77232875	.	+	.	ID=RLOC_00018600;geneIDs=FBgn0038315.path1;transcripts=FBgn0038315.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77232019	77232875	.	+	.	ID=FBgn0038315.mrna1;geneID=FBgn0038315.path1;Name=FBgn0038315;Dir=sensecoverage=100.0;identity=99.9;matches=794;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018600
Chr2	stalkie_big_nohaplotig	exon	77232019	77232235	100	+	.	Parent=FBgn0038315.mrna1;Target=FBgn0038315 1 217 +
Chr2	stalkie_big_nohaplotig	exon	77232298	77232875	99	+	.	Parent=FBgn0038315.mrna1;Target=FBgn0038315 218 795 +
Chr2	stalkie_big_nohaplotig	CDS	77232019	77232235	.	+	0	Parent=FBgn0038315.mrna1;Target=FBgn0038315 1 217 +
Chr2	stalkie_big_nohaplotig	CDS	77232298	77232875	.	+	2	Parent=FBgn0038315.mrna1;Target=FBgn0038315 218 795 +
Chr2	gffcl	locus	77240001	77243168	.	+	.	ID=RLOC_00018601;geneIDs=FBgn0026441.1.path1;transcripts=FBgn0026441.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77240001	77243168	.	+	.	ID=FBgn0026441.1.mrna1;geneID=FBgn0026441.1.path1;Name=FBgn0026441.1;Dir=sensecoverage=100.0;identity=99.7;matches=2874;mismatches=3;indels=6;unknowns=0;locus=RLOC_00018601
Chr2	stalkie_big_nohaplotig	exon	77240001	77240190	100	+	.	Parent=FBgn0026441.1.mrna1;Target=FBgn0026441.1 1 190 +
Chr2	stalkie_big_nohaplotig	exon	77240476	77243168	99	+	.	Parent=FBgn0026441.1.mrna1;Target=FBgn0026441.1 191 2877 +
Chr2	stalkie_big_nohaplotig	CDS	77240001	77240190	.	+	0	Parent=FBgn0026441.1.mrna1;Target=FBgn0026441.1 1 190 +
Chr2	stalkie_big_nohaplotig	CDS	77240476	77243168	.	+	2	Parent=FBgn0026441.1.mrna1;Target=FBgn0026441.1 191 2877 +
Chr2	gffcl	locus	77248228	77250740	.	+	.	ID=RLOC_00018602;geneIDs=comp83135_c1_seq1.path1,comp161391_c0_seq1.path1;transcripts=comp161391_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77248228	77250258	.	+	.	ID=comp161391_c0_seq1.mrna1;geneID=comp161391_c0_seq1.path1;Name=comp161391_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=2022;mismatches=2;indels=24;unknowns=0;Target=comp161391_c0_seq1 2041 1 .;CDS_Target=comp161391_c0_seq1 475 314 .;locus=RLOC_00018602
Chr2	stalkie_big_nohaplotig	exon	77248228	77250258	98	+	.	Parent=comp161391_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77248532	77248693	.	+	0	Parent=comp161391_c0_seq1.mrna1
Chr2	gffcl	locus	77256133	77256776	.	+	.	ID=RLOC_00018603;geneIDs=comp151465_c0_seq1.path1;transcripts=comp151465_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77256133	77256776	.	+	.	ID=comp151465_c0_seq1.mrna1;geneID=comp151465_c0_seq1.path1;Name=comp151465_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=643;mismatches=1;indels=0;unknowns=0;Target=comp151465_c0_seq1 644 1 .;CDS_Target=comp151465_c0_seq1 54 1 .;locus=RLOC_00018603
Chr2	stalkie_big_nohaplotig	exon	77256133	77256776	99	+	.	Parent=comp151465_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77256133	77256186	.	+	0	Parent=comp151465_c0_seq1.mrna1
Chr2	gffcl	locus	77259182	77262213	.	-	.	ID=RLOC_00018604;geneIDs=FBgn0259823.1.path1;transcripts=FBgn0259823.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77259182	77262213	.	-	.	ID=FBgn0259823.1.mrna1;geneID=FBgn0259823.1.path1;Name=FBgn0259823.1;Dir=sensecoverage=99.5;identity=99.9;matches=2858;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018604
Chr2	stalkie_big_nohaplotig	exon	77259182	77259260	100	-	.	Parent=FBgn0259823.1.mrna1;Target=FBgn0259823.1 2796 2874 +
Chr2	stalkie_big_nohaplotig	exon	77259342	77260600	100	-	.	Parent=FBgn0259823.1.mrna1;Target=FBgn0259823.1 1537 2795 +
Chr2	stalkie_big_nohaplotig	exon	77260692	77262213	99	-	.	Parent=FBgn0259823.1.mrna1;Target=FBgn0259823.1 15 1536 +
Chr2	stalkie_big_nohaplotig	CDS	77259182	77259260	.	-	1	Parent=FBgn0259823.1.mrna1;Target=FBgn0259823.1 2796 2874 +
Chr2	stalkie_big_nohaplotig	CDS	77259342	77260600	.	-	0	Parent=FBgn0259823.1.mrna1;Target=FBgn0259823.1 1537 2795 +
Chr2	stalkie_big_nohaplotig	CDS	77260692	77262212	.	-	0	Parent=FBgn0259823.1.mrna1;Target=FBgn0259823.1 16 1536 +
Chr2	gffcl	locus	77277946	77284490	.	+	.	ID=RLOC_00018605;geneIDs=FBgn0038309.1.path1;transcripts=FBgn0038309.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77277946	77284490	.	+	.	ID=FBgn0038309.1.mrna1;geneID=FBgn0038309.1.path1;Name=FBgn0038309.1;Dir=sensecoverage=100.0;identity=99.6;matches=1793;mismatches=7;indels=0;unknowns=0;locus=RLOC_00018605
Chr2	stalkie_big_nohaplotig	exon	77277946	77278117	100	+	.	Parent=FBgn0038309.1.mrna1;Target=FBgn0038309.1 1 172 +
Chr2	stalkie_big_nohaplotig	exon	77282528	77282683	98	+	.	Parent=FBgn0038309.1.mrna1;Target=FBgn0038309.1 173 328 +
Chr2	stalkie_big_nohaplotig	exon	77282752	77282881	99	+	.	Parent=FBgn0038309.1.mrna1;Target=FBgn0038309.1 329 458 +
Chr2	stalkie_big_nohaplotig	exon	77282947	77283092	98	+	.	Parent=FBgn0038309.1.mrna1;Target=FBgn0038309.1 459 604 +
Chr2	stalkie_big_nohaplotig	exon	77283161	77283410	100	+	.	Parent=FBgn0038309.1.mrna1;Target=FBgn0038309.1 605 854 +
Chr2	stalkie_big_nohaplotig	exon	77283474	77283706	99	+	.	Parent=FBgn0038309.1.mrna1;Target=FBgn0038309.1 855 1087 +
Chr2	stalkie_big_nohaplotig	exon	77283778	77284490	100	+	.	Parent=FBgn0038309.1.mrna1;Target=FBgn0038309.1 1088 1800 +
Chr2	stalkie_big_nohaplotig	CDS	77277946	77278117	.	+	0	Parent=FBgn0038309.1.mrna1;Target=FBgn0038309.1 1 172 +
Chr2	stalkie_big_nohaplotig	CDS	77282528	77282683	.	+	2	Parent=FBgn0038309.1.mrna1;Target=FBgn0038309.1 173 328 +
Chr2	stalkie_big_nohaplotig	CDS	77282752	77282881	.	+	2	Parent=FBgn0038309.1.mrna1;Target=FBgn0038309.1 329 458 +
Chr2	stalkie_big_nohaplotig	CDS	77282947	77283092	.	+	1	Parent=FBgn0038309.1.mrna1;Target=FBgn0038309.1 459 604 +
Chr2	stalkie_big_nohaplotig	CDS	77283161	77283410	.	+	2	Parent=FBgn0038309.1.mrna1;Target=FBgn0038309.1 605 854 +
Chr2	stalkie_big_nohaplotig	CDS	77283474	77283706	.	+	1	Parent=FBgn0038309.1.mrna1;Target=FBgn0038309.1 855 1087 +
Chr2	stalkie_big_nohaplotig	CDS	77283778	77284490	.	+	2	Parent=FBgn0038309.1.mrna1;Target=FBgn0038309.1 1088 1800 +
Chr2	gffcl	locus	77285047	77286986	.	-	.	ID=RLOC_00018606;geneIDs=FBgn0001219.1.path1;transcripts=FBgn0001219.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77285047	77286986	.	-	.	ID=FBgn0001219.1.mrna1;geneID=FBgn0001219.1.path1;Name=FBgn0001219.1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=1940;mismatches=0;indels=0;unknowns=0;Target=FBgn0001219.1 1947 8 .;CDS_Target=FBgn0001219.1 1947 10 .;locus=RLOC_00018606
Chr2	stalkie_big_nohaplotig	exon	77285047	77286986	100	-	.	Parent=FBgn0001219.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77285047	77286984	.	-	0	Parent=FBgn0001219.1.mrna1
Chr2	gffcl	locus	77288602	77289206	.	+	.	ID=RLOC_00018607;geneIDs=FBgn0038437.1.path1;transcripts=FBgn0038437.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77288602	77289206	.	+	.	ID=FBgn0038437.1.mrna1;geneID=FBgn0038437.1.path1;Name=FBgn0038437.1;Dir=sensecoverage=100.0;identity=100.0;matches=465;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018607
Chr2	stalkie_big_nohaplotig	exon	77288602	77288761	100	+	.	Parent=FBgn0038437.1.mrna1;Target=FBgn0038437.1 1 160 +
Chr2	stalkie_big_nohaplotig	exon	77288838	77288947	100	+	.	Parent=FBgn0038437.1.mrna1;Target=FBgn0038437.1 161 270 +
Chr2	stalkie_big_nohaplotig	exon	77289012	77289206	100	+	.	Parent=FBgn0038437.1.mrna1;Target=FBgn0038437.1 271 465 +
Chr2	stalkie_big_nohaplotig	CDS	77288602	77288761	.	+	0	Parent=FBgn0038437.1.mrna1;Target=FBgn0038437.1 1 160 +
Chr2	stalkie_big_nohaplotig	CDS	77288838	77288947	.	+	2	Parent=FBgn0038437.1.mrna1;Target=FBgn0038437.1 161 270 +
Chr2	stalkie_big_nohaplotig	CDS	77289012	77289206	.	+	0	Parent=FBgn0038437.1.mrna1;Target=FBgn0038437.1 271 465 +
Chr2	gffcl	locus	77289279	77289963	.	-	.	ID=RLOC_00018608;geneIDs=FBgn0004087.1.path1;transcripts=FBgn0004087.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77289279	77289963	.	-	.	ID=FBgn0004087.1.mrna1;geneID=FBgn0004087.1.path1;Name=FBgn0004087.1;Dir=sensecoverage=100.0;identity=100.0;matches=624;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018608
Chr2	stalkie_big_nohaplotig	exon	77289279	77289762	100	-	.	Parent=FBgn0004087.1.mrna1;Target=FBgn0004087.1 141 624 +
Chr2	stalkie_big_nohaplotig	exon	77289824	77289963	100	-	.	Parent=FBgn0004087.1.mrna1;Target=FBgn0004087.1 1 140 +
Chr2	stalkie_big_nohaplotig	CDS	77289279	77289762	.	-	1	Parent=FBgn0004087.1.mrna1;Target=FBgn0004087.1 141 624 +
Chr2	stalkie_big_nohaplotig	CDS	77289824	77289963	.	-	0	Parent=FBgn0004087.1.mrna1;Target=FBgn0004087.1 1 140 +
Chr2	gffcl	locus	77292217	77295585	.	-	.	ID=RLOC_00018609;geneIDs=FBgn0038436.1.path1;transcripts=FBgn0038436.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77292217	77295585	.	-	.	ID=FBgn0038436.1.mrna1;geneID=FBgn0038436.1.path1;Name=FBgn0038436.1;Dir=sensecoverage=100.0;identity=99.8;matches=2045;mismatches=4;indels=0;unknowns=0;locus=RLOC_00018609
Chr2	stalkie_big_nohaplotig	exon	77292217	77292839	99	-	.	Parent=FBgn0038436.1.mrna1;Target=FBgn0038436.1 1427 2049 +
Chr2	stalkie_big_nohaplotig	exon	77294160	77295585	99	-	.	Parent=FBgn0038436.1.mrna1;Target=FBgn0038436.1 1 1426 +
Chr2	stalkie_big_nohaplotig	CDS	77292217	77292839	.	-	2	Parent=FBgn0038436.1.mrna1;Target=FBgn0038436.1 1427 2049 +
Chr2	stalkie_big_nohaplotig	CDS	77294160	77295585	.	-	0	Parent=FBgn0038436.1.mrna1;Target=FBgn0038436.1 1 1426 +
Chr2	gffcl	locus	77299686	77300755	.	-	.	ID=RLOC_00018610;geneIDs=FBgn0027053.1.path1;transcripts=FBgn0027053.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77299686	77300755	.	-	.	ID=FBgn0027053.1.mrna1;geneID=FBgn0027053.1.path1;Name=FBgn0027053.1;Dir=sensecoverage=100.0;identity=100.0;matches=1005;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018610
Chr2	stalkie_big_nohaplotig	exon	77299686	77299828	100	-	.	Parent=FBgn0027053.1.mrna1;Target=FBgn0027053.1 863 1005 +
Chr2	stalkie_big_nohaplotig	exon	77299894	77300755	100	-	.	Parent=FBgn0027053.1.mrna1;Target=FBgn0027053.1 1 862 +
Chr2	stalkie_big_nohaplotig	CDS	77299686	77299828	.	-	2	Parent=FBgn0027053.1.mrna1;Target=FBgn0027053.1 863 1005 +
Chr2	stalkie_big_nohaplotig	CDS	77299894	77300755	.	-	0	Parent=FBgn0027053.1.mrna1;Target=FBgn0027053.1 1 862 +
Chr2	gffcl	locus	77305675	77311635	.	+	.	ID=RLOC_00018611;geneIDs=comp160942_c0_seq1.path1;transcripts=comp160942_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77305675	77311635	.	+	.	ID=comp160942_c0_seq1.mrna1;geneID=comp160942_c0_seq1.path1;Name=comp160942_c0_seq1;Dir=antisensecoverage=99.9;identity=99.5;matches=5489;mismatches=9;indels=16;unknowns=0;locus=RLOC_00018611
Chr2	stalkie_big_nohaplotig	exon	77305675	77306304	99	+	.	Parent=comp160942_c0_seq1.mrna1;Target=comp160942_c0_seq1 4885 5514 -
Chr2	stalkie_big_nohaplotig	exon	77306356	77306568	100	+	.	Parent=comp160942_c0_seq1.mrna1;Target=comp160942_c0_seq1 4672 4884 -
Chr2	stalkie_big_nohaplotig	exon	77306628	77306665	100	+	.	Parent=comp160942_c0_seq1.mrna1;Target=comp160942_c0_seq1 4634 4671 -
Chr2	stalkie_big_nohaplotig	exon	77306802	77308411	99	+	.	Parent=comp160942_c0_seq1.mrna1;Target=comp160942_c0_seq1 3023 4633 -
Chr2	stalkie_big_nohaplotig	exon	77308510	77308575	100	+	.	Parent=comp160942_c0_seq1.mrna1;Target=comp160942_c0_seq1 2957 3022 -
Chr2	stalkie_big_nohaplotig	exon	77308642	77308734	100	+	.	Parent=comp160942_c0_seq1.mrna1;Target=comp160942_c0_seq1 2864 2956 -
Chr2	stalkie_big_nohaplotig	exon	77308788	77311635	99	+	.	Parent=comp160942_c0_seq1.mrna1;Target=comp160942_c0_seq1 1 2863 -
Chr2	stalkie_big_nohaplotig	CDS	77306131	77306304	.	+	0	Parent=comp160942_c0_seq1.mrna1;Target=comp160942_c0_seq1 4885 5058 .
Chr2	stalkie_big_nohaplotig	CDS	77306356	77306568	.	+	0	Parent=comp160942_c0_seq1.mrna1;Target=comp160942_c0_seq1 4672 4884 .
Chr2	stalkie_big_nohaplotig	CDS	77306628	77306665	.	+	0	Parent=comp160942_c0_seq1.mrna1;Target=comp160942_c0_seq1 4634 4671 .
Chr2	stalkie_big_nohaplotig	CDS	77306802	77307026	.	+	1	Parent=comp160942_c0_seq1.mrna1;Target=comp160942_c0_seq1 4408 4633 .
Chr2	gffcl	locus	77312993	77316978	.	+	.	ID=RLOC_00018612;geneIDs=ORF26.path1;transcripts=ORF26.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77312993	77316978	.	+	.	ID=ORF26.mrna1;geneID=ORF26.path1;Name=ORF26;Dir=sensecoverage=100.0;identity=98.8;matches=3853;mismatches=45;indels=0;unknowns=14;locus=RLOC_00018612
Chr2	stalkie_big_nohaplotig	exon	77312993	77315657	98	+	.	Parent=ORF26.mrna1;Target=ORF26 1 2665 +
Chr2	stalkie_big_nohaplotig	exon	77315732	77316978	99	+	.	Parent=ORF26.mrna1;Target=ORF26 2666 3912 +
Chr2	stalkie_big_nohaplotig	CDS	77312993	77315657	.	+	0	Parent=ORF26.mrna1;Target=ORF26 1 2665 +
Chr2	stalkie_big_nohaplotig	CDS	77315732	77316978	.	+	2	Parent=ORF26.mrna1;Target=ORF26 2666 3912 +
Chr2	gffcl	locus	77318136	77319238	.	-	.	ID=RLOC_00018613;geneIDs=FBgn0038432.1.path1;transcripts=FBgn0038432.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77318136	77319238	.	-	.	ID=FBgn0038432.1.mrna1;geneID=FBgn0038432.1.path1;Name=FBgn0038432.1;Dir=sensecoverage=99.6;identity=99.3;matches=804;mismatches=6;indels=0;unknowns=0;locus=RLOC_00018613
Chr2	stalkie_big_nohaplotig	exon	77318136	77318286	99	-	.	Parent=FBgn0038432.1.mrna1;Target=FBgn0038432.1 663 813 +
Chr2	stalkie_big_nohaplotig	exon	77318354	77318529	98	-	.	Parent=FBgn0038432.1.mrna1;Target=FBgn0038432.1 487 662 +
Chr2	stalkie_big_nohaplotig	exon	77318611	77318809	100	-	.	Parent=FBgn0038432.1.mrna1;Target=FBgn0038432.1 288 486 +
Chr2	stalkie_big_nohaplotig	exon	77318882	77319054	100	-	.	Parent=FBgn0038432.1.mrna1;Target=FBgn0038432.1 115 287 +
Chr2	stalkie_big_nohaplotig	exon	77319128	77319238	98	-	.	Parent=FBgn0038432.1.mrna1;Target=FBgn0038432.1 4 114 +
Chr2	stalkie_big_nohaplotig	CDS	77318136	77318286	.	-	1	Parent=FBgn0038432.1.mrna1;Target=FBgn0038432.1 663 813 +
Chr2	stalkie_big_nohaplotig	CDS	77318354	77318529	.	-	0	Parent=FBgn0038432.1.mrna1;Target=FBgn0038432.1 487 662 +
Chr2	stalkie_big_nohaplotig	CDS	77318611	77318809	.	-	1	Parent=FBgn0038432.1.mrna1;Target=FBgn0038432.1 288 486 +
Chr2	stalkie_big_nohaplotig	CDS	77318882	77319054	.	-	0	Parent=FBgn0038432.1.mrna1;Target=FBgn0038432.1 115 287 +
Chr2	stalkie_big_nohaplotig	CDS	77319128	77319238	.	-	0	Parent=FBgn0038432.1.mrna1;Target=FBgn0038432.1 4 114 +
Chr2	gffcl	locus	77320627	77322022	.	-	.	ID=RLOC_00018614;geneIDs=FBgn0038431.1.path1;transcripts=FBgn0038431.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77320627	77322022	.	-	.	ID=FBgn0038431.1.mrna1;geneID=FBgn0038431.1.path1;Name=FBgn0038431.1;Dir=sensecoverage=100.0;identity=99.9;matches=824;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018614
Chr2	stalkie_big_nohaplotig	exon	77320627	77320816	100	-	.	Parent=FBgn0038431.1.mrna1;Target=FBgn0038431.1 636 825 +
Chr2	stalkie_big_nohaplotig	exon	77320872	77321326	99	-	.	Parent=FBgn0038431.1.mrna1;Target=FBgn0038431.1 181 635 +
Chr2	stalkie_big_nohaplotig	exon	77321843	77322022	100	-	.	Parent=FBgn0038431.1.mrna1;Target=FBgn0038431.1 1 180 +
Chr2	stalkie_big_nohaplotig	CDS	77320627	77320816	.	-	1	Parent=FBgn0038431.1.mrna1;Target=FBgn0038431.1 636 825 +
Chr2	stalkie_big_nohaplotig	CDS	77320872	77321326	.	-	0	Parent=FBgn0038431.1.mrna1;Target=FBgn0038431.1 181 635 +
Chr2	stalkie_big_nohaplotig	CDS	77321843	77322022	.	-	0	Parent=FBgn0038431.1.mrna1;Target=FBgn0038431.1 1 180 +
Chr2	gffcl	locus	77325934	77327642	.	+	.	ID=RLOC_00018615;geneIDs=FBgn0041191.1.path1;transcripts=FBgn0041191.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77325934	77327642	.	+	.	ID=FBgn0041191.1.mrna1;geneID=FBgn0041191.1.path1;Name=FBgn0041191.1;Dir=sensecoverage=100.0;identity=99.8;matches=599;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018615
Chr2	stalkie_big_nohaplotig	exon	77325934	77326036	99	+	.	Parent=FBgn0041191.1.mrna1;Target=FBgn0041191.1 1 103 +
Chr2	stalkie_big_nohaplotig	exon	77326146	77326217	100	+	.	Parent=FBgn0041191.1.mrna1;Target=FBgn0041191.1 104 175 +
Chr2	stalkie_big_nohaplotig	exon	77327080	77327287	100	+	.	Parent=FBgn0041191.1.mrna1;Target=FBgn0041191.1 176 383 +
Chr2	stalkie_big_nohaplotig	exon	77327360	77327489	100	+	.	Parent=FBgn0041191.1.mrna1;Target=FBgn0041191.1 384 513 +
Chr2	stalkie_big_nohaplotig	exon	77327556	77327642	100	+	.	Parent=FBgn0041191.1.mrna1;Target=FBgn0041191.1 514 600 +
Chr2	stalkie_big_nohaplotig	CDS	77325934	77326036	.	+	0	Parent=FBgn0041191.1.mrna1;Target=FBgn0041191.1 1 103 +
Chr2	stalkie_big_nohaplotig	CDS	77326146	77326217	.	+	2	Parent=FBgn0041191.1.mrna1;Target=FBgn0041191.1 104 175 +
Chr2	stalkie_big_nohaplotig	CDS	77327080	77327287	.	+	2	Parent=FBgn0041191.1.mrna1;Target=FBgn0041191.1 176 383 +
Chr2	stalkie_big_nohaplotig	CDS	77327360	77327489	.	+	1	Parent=FBgn0041191.1.mrna1;Target=FBgn0041191.1 384 513 +
Chr2	stalkie_big_nohaplotig	CDS	77327556	77327642	.	+	0	Parent=FBgn0041191.1.mrna1;Target=FBgn0041191.1 514 600 +
Chr2	gffcl	locus	77342784	77343602	.	+	.	ID=RLOC_00018616;geneIDs=comp149428_c0_seq1.path1;transcripts=comp149428_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77342784	77343602	.	+	.	ID=comp149428_c0_seq1.mrna1;geneID=comp149428_c0_seq1.path1;Name=comp149428_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=818;mismatches=1;indels=0;unknowns=0;Target=comp149428_c0_seq1 819 1 .;CDS_Target=comp149428_c0_seq1 63 1 .;locus=RLOC_00018616
Chr2	stalkie_big_nohaplotig	exon	77342784	77343602	99	+	.	Parent=comp149428_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77342784	77342846	.	+	0	Parent=comp149428_c0_seq1.mrna1
Chr2	gffcl	locus	77353132	77355359	.	+	.	ID=RLOC_00018617;geneIDs=FBgn0010877.1.path1;transcripts=FBgn0010877.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77353132	77355359	.	+	.	ID=FBgn0010877.1.mrna1;geneID=FBgn0010877.1.path1;Name=FBgn0010877.1;Dir=sensecoverage=99.7;identity=100.0;matches=1771;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018617
Chr2	stalkie_big_nohaplotig	exon	77353132	77354515	100	+	.	Parent=FBgn0010877.1.mrna1;Target=FBgn0010877.1 6 1389 +
Chr2	stalkie_big_nohaplotig	exon	77354899	77355159	100	+	.	Parent=FBgn0010877.1.mrna1;Target=FBgn0010877.1 1390 1650 +
Chr2	stalkie_big_nohaplotig	exon	77355234	77355359	100	+	.	Parent=FBgn0010877.1.mrna1;Target=FBgn0010877.1 1651 1776 +
Chr2	stalkie_big_nohaplotig	CDS	77353133	77354515	.	+	0	Parent=FBgn0010877.1.mrna1;Target=FBgn0010877.1 7 1389 +
Chr2	stalkie_big_nohaplotig	CDS	77354899	77355159	.	+	0	Parent=FBgn0010877.1.mrna1;Target=FBgn0010877.1 1390 1650 +
Chr2	stalkie_big_nohaplotig	CDS	77355234	77355359	.	+	0	Parent=FBgn0010877.1.mrna1;Target=FBgn0010877.1 1651 1776 +
Chr2	gffcl	locus	77356750	77357037	.	+	.	ID=RLOC_00018618;geneIDs=FBgn0038596.1.path1;transcripts=FBgn0038596.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77356750	77357037	.	+	.	ID=FBgn0038596.1.mrna1;geneID=FBgn0038596.1.path1;Name=FBgn0038596.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=288;mismatches=0;indels=0;unknowns=0;Target=FBgn0038596.1 288 1 .;locus=RLOC_00018618
Chr2	stalkie_big_nohaplotig	exon	77356750	77357037	100	+	.	Parent=FBgn0038596.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77356750	77357037	.	+	0	Parent=FBgn0038596.1.mrna1
Chr2	gffcl	locus	77366456	77366923	.	-	.	ID=RLOC_00018619;geneIDs=comp135591_c0_seq1.path1;transcripts=comp135591_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77366456	77366923	.	-	.	ID=comp135591_c0_seq1.mrna1;geneID=comp135591_c0_seq1.path1;Name=comp135591_c0_seq1;Dir=indeterminatecoverage=95.3;identity=99.8;matches=467;mismatches=1;indels=0;unknowns=0;Target=comp135591_c0_seq1 468 1 .;CDS_Target=comp135591_c0_seq1 467 291 .;locus=RLOC_00018619
Chr2	stalkie_big_nohaplotig	exon	77366456	77366923	99	-	.	Parent=comp135591_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77366457	77366633	.	-	0	Parent=comp135591_c0_seq1.mrna1
Chr2	gffcl	locus	77369082	77369683	.	+	.	ID=RLOC_00018620;geneIDs=FBgn0027358.1.path1;transcripts=FBgn0027358.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77369082	77369683	.	+	.	ID=FBgn0027358.1.mrna1;geneID=FBgn0027358.1.path1;Name=FBgn0027358.1;Dir=sensecoverage=100.0;identity=100.0;matches=363;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018620
Chr2	stalkie_big_nohaplotig	exon	77369082	77369102	100	+	.	Parent=FBgn0027358.1.mrna1;Target=FBgn0027358.1 1 21 +
Chr2	stalkie_big_nohaplotig	exon	77369279	77369374	100	+	.	Parent=FBgn0027358.1.mrna1;Target=FBgn0027358.1 22 117 +
Chr2	stalkie_big_nohaplotig	exon	77369438	77369683	100	+	.	Parent=FBgn0027358.1.mrna1;Target=FBgn0027358.1 118 363 +
Chr2	stalkie_big_nohaplotig	CDS	77369082	77369102	.	+	0	Parent=FBgn0027358.1.mrna1;Target=FBgn0027358.1 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	77369279	77369374	.	+	0	Parent=FBgn0027358.1.mrna1;Target=FBgn0027358.1 22 117 +
Chr2	stalkie_big_nohaplotig	CDS	77369438	77369683	.	+	0	Parent=FBgn0027358.1.mrna1;Target=FBgn0027358.1 118 363 +
Chr2	gffcl	locus	77369687	77370583	.	+	.	ID=RLOC_00018621;geneIDs=FBgn0031041.1.path1;transcripts=FBgn0031041.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77369687	77370583	.	+	.	ID=FBgn0031041.1.mrna1;geneID=FBgn0031041.1.path1;Name=FBgn0031041.1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=893;mismatches=4;indels=6;unknowns=0;Target=FBgn0031041.1 903 1 .;locus=RLOC_00018621
Chr2	stalkie_big_nohaplotig	exon	77369687	77370583	98	+	.	Parent=FBgn0031041.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77369687	77370583	.	+	0	Parent=FBgn0031041.1.mrna1
Chr2	gffcl	locus	77372079	77373012	.	-	.	ID=RLOC_00018622;geneIDs=FBgn0037848.1.path1;transcripts=FBgn0037848.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77372079	77373012	.	-	.	ID=FBgn0037848.1.mrna1;geneID=FBgn0037848.1.path1;Name=FBgn0037848.1;Dir=sensecoverage=100.0;identity=100.0;matches=879;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018622
Chr2	stalkie_big_nohaplotig	exon	77372079	77372401	100	-	.	Parent=FBgn0037848.1.mrna1;Target=FBgn0037848.1 557 879 +
Chr2	stalkie_big_nohaplotig	exon	77372457	77373012	100	-	.	Parent=FBgn0037848.1.mrna1;Target=FBgn0037848.1 1 556 +
Chr2	stalkie_big_nohaplotig	CDS	77372079	77372401	.	-	2	Parent=FBgn0037848.1.mrna1;Target=FBgn0037848.1 557 879 +
Chr2	stalkie_big_nohaplotig	CDS	77372457	77373012	.	-	0	Parent=FBgn0037848.1.mrna1;Target=FBgn0037848.1 1 556 +
Chr2	stalkie_big_nohaplotig	mRNA	77376814	77377518	.	+	.	ID=comp150080_c0_seq1.mrna1;geneID=comp150080_c0_seq1.path1;Name=comp150080_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=700;mismatches=5;indels=3;unknowns=0;Target=comp150080_c0_seq1 708 1 .;CDS_Target=comp150080_c0_seq1 436 350 .;locus=RLOC_00018623
Chr2	stalkie_big_nohaplotig	exon	77376814	77377518	98	+	.	Parent=comp150080_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77377163	77377249	.	+	0	Parent=comp150080_c0_seq1.mrna1
Chr2	gffcl	locus	77375436	77379098	.	-	.	ID=RLOC_00018624;geneIDs=FBgn0011768.3.path1;transcripts=FBgn0011768.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77375436	77379098	.	-	.	ID=FBgn0011768.3.mrna1;geneID=FBgn0011768.3.path1;Name=FBgn0011768.3;Dir=sensecoverage=100.0;identity=99.8;matches=1285;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018624
Chr2	stalkie_big_nohaplotig	exon	77375436	77375996	99	-	.	Parent=FBgn0011768.3.mrna1;Target=FBgn0011768.3 727 1287 +
Chr2	stalkie_big_nohaplotig	exon	77376081	77376167	100	-	.	Parent=FBgn0011768.3.mrna1;Target=FBgn0011768.3 640 726 +
Chr2	stalkie_big_nohaplotig	exon	77376223	77376702	99	-	.	Parent=FBgn0011768.3.mrna1;Target=FBgn0011768.3 160 639 +
Chr2	stalkie_big_nohaplotig	exon	77378940	77379098	100	-	.	Parent=FBgn0011768.3.mrna1;Target=FBgn0011768.3 1 159 +
Chr2	stalkie_big_nohaplotig	CDS	77375436	77375996	.	-	0	Parent=FBgn0011768.3.mrna1;Target=FBgn0011768.3 727 1287 +
Chr2	stalkie_big_nohaplotig	CDS	77376081	77376167	.	-	0	Parent=FBgn0011768.3.mrna1;Target=FBgn0011768.3 640 726 +
Chr2	stalkie_big_nohaplotig	CDS	77376223	77376702	.	-	0	Parent=FBgn0011768.3.mrna1;Target=FBgn0011768.3 160 639 +
Chr2	stalkie_big_nohaplotig	CDS	77378940	77379098	.	-	0	Parent=FBgn0011768.3.mrna1;Target=FBgn0011768.3 1 159 +
Chr2	gffcl	locus	77383731	77386153	.	-	.	ID=RLOC_00018625;geneIDs=FBgn0011768.2.path1;transcripts=FBgn0011768.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77383731	77386153	.	-	.	ID=FBgn0011768.2.mrna1;geneID=FBgn0011768.2.path1;Name=FBgn0011768.2;Dir=sensecoverage=100.0;identity=99.8;matches=1168;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018625
Chr2	stalkie_big_nohaplotig	exon	77383731	77384288	100	-	.	Parent=FBgn0011768.2.mrna1;Target=FBgn0011768.2 613 1170 +
Chr2	stalkie_big_nohaplotig	exon	77384363	77384449	100	-	.	Parent=FBgn0011768.2.mrna1;Target=FBgn0011768.2 526 612 +
Chr2	stalkie_big_nohaplotig	exon	77385170	77385649	99	-	.	Parent=FBgn0011768.2.mrna1;Target=FBgn0011768.2 46 525 +
Chr2	stalkie_big_nohaplotig	exon	77386109	77386153	100	-	.	Parent=FBgn0011768.2.mrna1;Target=FBgn0011768.2 1 45 +
Chr2	stalkie_big_nohaplotig	CDS	77383731	77384288	.	-	0	Parent=FBgn0011768.2.mrna1;Target=FBgn0011768.2 613 1170 +
Chr2	stalkie_big_nohaplotig	CDS	77384363	77384449	.	-	0	Parent=FBgn0011768.2.mrna1;Target=FBgn0011768.2 526 612 +
Chr2	stalkie_big_nohaplotig	CDS	77385170	77385649	.	-	0	Parent=FBgn0011768.2.mrna1;Target=FBgn0011768.2 46 525 +
Chr2	stalkie_big_nohaplotig	CDS	77386109	77386153	.	-	0	Parent=FBgn0011768.2.mrna1;Target=FBgn0011768.2 1 45 +
Chr2	gffcl	locus	77384828	77385038	.	+	.	ID=RLOC_00018626;geneIDs=comp143977_c0_seq1.path1;transcripts=comp143977_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77384828	77385038	.	+	.	ID=comp143977_c0_seq1.mrna1;geneID=comp143977_c0_seq1.path1;Name=comp143977_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=211;mismatches=0;indels=0;unknowns=0;Target=comp143977_c0_seq1 211 1 .;CDS_Target=comp143977_c0_seq1 70 2 .;locus=RLOC_00018626
Chr2	stalkie_big_nohaplotig	exon	77384828	77385038	100	+	.	Parent=comp143977_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77384829	77384897	.	+	0	Parent=comp143977_c0_seq1.mrna1
Chr2	gffcl	locus	77391577	77393045	.	-	.	ID=RLOC_00018627;geneIDs=FBgn0011768.1.path1;transcripts=FBgn0011768.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77391577	77393045	.	-	.	ID=FBgn0011768.1.mrna1;geneID=FBgn0011768.1.path1;Name=FBgn0011768.1;Dir=sensecoverage=100.0;identity=99.9;matches=1238;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018627
Chr2	stalkie_big_nohaplotig	exon	77391577	77392140	100	-	.	Parent=FBgn0011768.1.mrna1;Target=FBgn0011768.1 676 1239 +
Chr2	stalkie_big_nohaplotig	exon	77392206	77392292	100	-	.	Parent=FBgn0011768.1.mrna1;Target=FBgn0011768.1 589 675 +
Chr2	stalkie_big_nohaplotig	exon	77392356	77392820	100	-	.	Parent=FBgn0011768.1.mrna1;Target=FBgn0011768.1 124 588 +
Chr2	stalkie_big_nohaplotig	exon	77392923	77393045	99	-	.	Parent=FBgn0011768.1.mrna1;Target=FBgn0011768.1 1 123 +
Chr2	stalkie_big_nohaplotig	CDS	77391577	77392140	.	-	0	Parent=FBgn0011768.1.mrna1;Target=FBgn0011768.1 676 1239 +
Chr2	stalkie_big_nohaplotig	CDS	77392206	77392292	.	-	0	Parent=FBgn0011768.1.mrna1;Target=FBgn0011768.1 589 675 +
Chr2	stalkie_big_nohaplotig	CDS	77392356	77392820	.	-	0	Parent=FBgn0011768.1.mrna1;Target=FBgn0011768.1 124 588 +
Chr2	stalkie_big_nohaplotig	CDS	77392923	77393045	.	-	0	Parent=FBgn0011768.1.mrna1;Target=FBgn0011768.1 1 123 +
Chr2	gffcl	locus	77396675	77401756	.	-	.	ID=RLOC_00018628;geneIDs=FBgn0002783.1.path1,comp159771_c1_seq1.path1;transcripts=comp159771_c1_seq1.mrna1,FBgn0002783.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77396675	77401273	.	-	.	ID=comp159771_c1_seq1.mrna1;geneID=comp159771_c1_seq1.path1;Name=comp159771_c1_seq1;Dir=antisensecoverage=97.1;identity=99.7;matches=3756;mismatches=12;indels=0;unknowns=0;locus=RLOC_00018628
Chr2	stalkie_big_nohaplotig	exon	77396675	77396977	99	-	.	Parent=comp159771_c1_seq1.mrna1;Target=comp159771_c1_seq1 1 303 -
Chr2	stalkie_big_nohaplotig	exon	77397029	77397631	100	-	.	Parent=comp159771_c1_seq1.mrna1;Target=comp159771_c1_seq1 304 906 -
Chr2	stalkie_big_nohaplotig	exon	77397980	77398181	100	-	.	Parent=comp159771_c1_seq1.mrna1;Target=comp159771_c1_seq1 907 1108 -
Chr2	stalkie_big_nohaplotig	exon	77398251	77399025	99	-	.	Parent=comp159771_c1_seq1.mrna1;Target=comp159771_c1_seq1 1109 1883 -
Chr2	stalkie_big_nohaplotig	exon	77399091	77399421	99	-	.	Parent=comp159771_c1_seq1.mrna1;Target=comp159771_c1_seq1 1884 2214 -
Chr2	stalkie_big_nohaplotig	exon	77399476	77400385	99	-	.	Parent=comp159771_c1_seq1.mrna1;Target=comp159771_c1_seq1 2215 3124 -
Chr2	stalkie_big_nohaplotig	exon	77400540	77400665	100	-	.	Parent=comp159771_c1_seq1.mrna1;Target=comp159771_c1_seq1 3125 3250 -
Chr2	stalkie_big_nohaplotig	exon	77400756	77401273	98	-	.	Parent=comp159771_c1_seq1.mrna1;Target=comp159771_c1_seq1 3251 3768 -
Chr2	stalkie_big_nohaplotig	CDS	77396793	77396977	.	-	2	Parent=comp159771_c1_seq1.mrna1;Target=comp159771_c1_seq1 119 303 .
Chr2	stalkie_big_nohaplotig	CDS	77397029	77397631	.	-	2	Parent=comp159771_c1_seq1.mrna1;Target=comp159771_c1_seq1 304 906 .
Chr2	stalkie_big_nohaplotig	CDS	77397980	77398181	.	-	0	Parent=comp159771_c1_seq1.mrna1;Target=comp159771_c1_seq1 907 1108 .
Chr2	stalkie_big_nohaplotig	CDS	77398251	77399025	.	-	1	Parent=comp159771_c1_seq1.mrna1;Target=comp159771_c1_seq1 1109 1883 .
Chr2	stalkie_big_nohaplotig	CDS	77399091	77399421	.	-	2	Parent=comp159771_c1_seq1.mrna1;Target=comp159771_c1_seq1 1884 2214 .
Chr2	stalkie_big_nohaplotig	CDS	77399476	77400385	.	-	0	Parent=comp159771_c1_seq1.mrna1;Target=comp159771_c1_seq1 2215 3124 .
Chr2	stalkie_big_nohaplotig	CDS	77400540	77400665	.	-	0	Parent=comp159771_c1_seq1.mrna1;Target=comp159771_c1_seq1 3125 3250 .
Chr2	stalkie_big_nohaplotig	CDS	77400756	77400872	.	-	0	Parent=comp159771_c1_seq1.mrna1;Target=comp159771_c1_seq1 3251 3367 .
Chr2	stalkie_big_nohaplotig	mRNA	77396796	77401756	.	-	.	ID=FBgn0002783.1.mrna1;geneID=FBgn0002783.1.path1;Name=FBgn0002783.1;Dir=sensecoverage=100.0;identity=99.8;matches=3308;mismatches=6;indels=1;unknowns=0;locus=RLOC_00018628
Chr2	stalkie_big_nohaplotig	exon	77396796	77396977	98	-	.	Parent=FBgn0002783.1.mrna1;Target=FBgn0002783.1 3134 3315 +
Chr2	stalkie_big_nohaplotig	exon	77397029	77397631	100	-	.	Parent=FBgn0002783.1.mrna1;Target=FBgn0002783.1 2531 3133 +
Chr2	stalkie_big_nohaplotig	exon	77397980	77398181	100	-	.	Parent=FBgn0002783.1.mrna1;Target=FBgn0002783.1 2329 2530 +
Chr2	stalkie_big_nohaplotig	exon	77398251	77399025	99	-	.	Parent=FBgn0002783.1.mrna1;Target=FBgn0002783.1 1554 2328 +
Chr2	stalkie_big_nohaplotig	exon	77399091	77399421	99	-	.	Parent=FBgn0002783.1.mrna1;Target=FBgn0002783.1 1223 1553 +
Chr2	stalkie_big_nohaplotig	exon	77399476	77400385	99	-	.	Parent=FBgn0002783.1.mrna1;Target=FBgn0002783.1 313 1222 +
Chr2	stalkie_big_nohaplotig	exon	77400540	77400665	100	-	.	Parent=FBgn0002783.1.mrna1;Target=FBgn0002783.1 187 312 +
Chr2	stalkie_big_nohaplotig	exon	77400756	77400896	100	-	.	Parent=FBgn0002783.1.mrna1;Target=FBgn0002783.1 46 186 +
Chr2	stalkie_big_nohaplotig	exon	77401713	77401756	95	-	.	Parent=FBgn0002783.1.mrna1;Target=FBgn0002783.1 1 45 +
Chr2	stalkie_big_nohaplotig	CDS	77400889	77400896	.	-	0	Parent=FBgn0002783.1.mrna1;Target=FBgn0002783.1 46 53 +
Chr2	stalkie_big_nohaplotig	CDS	77401713	77401754	.	-	0	Parent=FBgn0002783.1.mrna1;Target=FBgn0002783.1 3 45 +
Chr2	gffcl	locus	77410421	77416987	.	+	.	ID=RLOC_00018629;geneIDs=FBgn0022787.1.path1;transcripts=FBgn0022787.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77410421	77416987	.	+	.	ID=FBgn0022787.1.mrna1;geneID=FBgn0022787.1.path1;Name=FBgn0022787.1;Dir=sensecoverage=100.0;identity=99.8;matches=5434;mismatches=10;indels=1;unknowns=0;locus=RLOC_00018629
Chr2	stalkie_big_nohaplotig	exon	77410421	77410434	100	+	.	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 1 14 +
Chr2	stalkie_big_nohaplotig	exon	77410570	77411182	100	+	.	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 15 627 +
Chr2	stalkie_big_nohaplotig	exon	77411307	77411583	99	+	.	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 628 904 +
Chr2	stalkie_big_nohaplotig	exon	77411670	77411863	100	+	.	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 905 1098 +
Chr2	stalkie_big_nohaplotig	exon	77411935	77412479	99	+	.	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 1099 1643 +
Chr2	stalkie_big_nohaplotig	exon	77412542	77413341	99	+	.	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 1644 2443 +
Chr2	stalkie_big_nohaplotig	exon	77413431	77413560	100	+	.	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 2444 2573 +
Chr2	stalkie_big_nohaplotig	exon	77413622	77414111	100	+	.	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 2574 3063 +
Chr2	stalkie_big_nohaplotig	exon	77414185	77414415	100	+	.	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 3064 3294 +
Chr2	stalkie_big_nohaplotig	exon	77414489	77414809	99	+	.	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 3295 3615 +
Chr2	stalkie_big_nohaplotig	exon	77414880	77415093	99	+	.	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 3616 3829 +
Chr2	stalkie_big_nohaplotig	exon	77415162	77416410	99	+	.	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 3830 5078 +
Chr2	stalkie_big_nohaplotig	exon	77416544	77416784	99	+	.	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 5079 5319 +
Chr2	stalkie_big_nohaplotig	exon	77416863	77416987	99	+	.	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 5320 5445 +
Chr2	stalkie_big_nohaplotig	CDS	77410421	77410434	.	+	0	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 1 14 +
Chr2	stalkie_big_nohaplotig	CDS	77410570	77411182	.	+	1	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 15 627 +
Chr2	stalkie_big_nohaplotig	CDS	77411307	77411583	.	+	0	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 628 904 +
Chr2	stalkie_big_nohaplotig	CDS	77411670	77411863	.	+	2	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 905 1098 +
Chr2	stalkie_big_nohaplotig	CDS	77411935	77412479	.	+	0	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 1099 1643 +
Chr2	stalkie_big_nohaplotig	CDS	77412542	77413341	.	+	1	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 1644 2443 +
Chr2	stalkie_big_nohaplotig	CDS	77413431	77413560	.	+	2	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 2444 2573 +
Chr2	stalkie_big_nohaplotig	CDS	77413622	77414111	.	+	1	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 2574 3063 +
Chr2	stalkie_big_nohaplotig	CDS	77414185	77414415	.	+	0	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 3064 3294 +
Chr2	stalkie_big_nohaplotig	CDS	77414489	77414809	.	+	0	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 3295 3615 +
Chr2	stalkie_big_nohaplotig	CDS	77414880	77415093	.	+	0	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 3616 3829 +
Chr2	stalkie_big_nohaplotig	CDS	77415162	77416410	.	+	2	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 3830 5078 +
Chr2	stalkie_big_nohaplotig	CDS	77416544	77416784	.	+	1	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 5079 5319 +
Chr2	stalkie_big_nohaplotig	CDS	77416863	77416987	.	+	0	Parent=FBgn0022787.1.mrna1;Target=FBgn0022787.1 5320 5445 +
Chr2	gffcl	locus	77417723	77418152	.	+	.	ID=RLOC_00018630;geneIDs=comp122966_c0_seq1.path2;transcripts=comp122966_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	77417723	77418152	.	+	.	ID=comp122966_c0_seq1.mrna2;geneID=comp122966_c0_seq1.path2;Name=comp122966_c0_seq1;Dir=indeterminatecoverage=90.1;identity=96.6;matches=423;mismatches=7;indels=8;unknowns=0;Target=comp122966_c0_seq1 485 48 .;CDS_Target=comp122966_c0_seq1 81 48 .;locus=RLOC_00018630
Chr2	stalkie_big_nohaplotig	exon	77417723	77418152	96	+	.	Parent=comp122966_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	77417723	77417756	.	+	2	Parent=comp122966_c0_seq1.mrna2
Chr2	gffcl	locus	77425020	77427305	.	+	.	ID=RLOC_00018631;geneIDs=FBgn0038783.1.path1;transcripts=FBgn0038783.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77425020	77427305	.	+	.	ID=FBgn0038783.1.mrna1;geneID=FBgn0038783.1.path1;Name=FBgn0038783.1;Dir=sensecoverage=100.0;identity=100.0;matches=759;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018631
Chr2	stalkie_big_nohaplotig	exon	77425020	77425238	100	+	.	Parent=FBgn0038783.1.mrna1;Target=FBgn0038783.1 1 219 +
Chr2	stalkie_big_nohaplotig	exon	77425307	77425682	100	+	.	Parent=FBgn0038783.1.mrna1;Target=FBgn0038783.1 220 595 +
Chr2	stalkie_big_nohaplotig	exon	77427142	77427305	100	+	.	Parent=FBgn0038783.1.mrna1;Target=FBgn0038783.1 596 759 +
Chr2	stalkie_big_nohaplotig	CDS	77425020	77425238	.	+	0	Parent=FBgn0038783.1.mrna1;Target=FBgn0038783.1 1 219 +
Chr2	stalkie_big_nohaplotig	CDS	77425307	77425682	.	+	0	Parent=FBgn0038783.1.mrna1;Target=FBgn0038783.1 220 595 +
Chr2	stalkie_big_nohaplotig	CDS	77427142	77427305	.	+	2	Parent=FBgn0038783.1.mrna1;Target=FBgn0038783.1 596 759 +
Chr2	gffcl	locus	77425720	77426871	.	+	.	ID=RLOC_00018632;geneIDs=comp1672992_c0_seq1.path1;transcripts=comp1672992_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77425720	77426871	.	+	.	ID=comp1672992_c0_seq1.mrna1;geneID=comp1672992_c0_seq1.path1;Name=comp1672992_c0_seq1;Dir=indeterminatecoverage=98.6;identity=99.5;matches=1146;mismatches=0;indels=6;unknowns=0;Target=comp1672992_c0_seq1 1146 1 .;CDS_Target=comp1672992_c0_seq1 401 264 .;locus=RLOC_00018632
Chr2	stalkie_big_nohaplotig	exon	77425720	77426871	99	+	.	Parent=comp1672992_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77425989	77426126	.	+	0	Parent=comp1672992_c0_seq1.mrna1
Chr2	gffcl	locus	77431012	77433277	.	-	.	ID=RLOC_00018633;geneIDs=comp130912_c0_seq1.path1,comp158353_c0_seq1.path1;transcripts=comp158353_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77431962	77433277	.	-	.	ID=comp158353_c0_seq1.mrna1;geneID=comp158353_c0_seq1.path1;Name=comp158353_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.6;matches=1313;mismatches=3;indels=2;unknowns=0;Target=comp158353_c0_seq1 1327 10 .;CDS_Target=comp158353_c0_seq1 1191 1072 .;locus=RLOC_00018633
Chr2	stalkie_big_nohaplotig	exon	77431962	77433277	99	-	.	Parent=comp158353_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77432098	77432217	.	-	0	Parent=comp158353_c0_seq1.mrna1
Chr2	gffcl	locus	77433739	77434967	.	.	.	ID=RLOC_00018634;geneIDs=comp135866_c0_seq1.path1,comp146106_c0_seq1.path1;transcripts=comp146106_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77434304	77434967	.	-	.	ID=comp146106_c0_seq1.mrna1;geneID=comp146106_c0_seq1.path1;Name=comp146106_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=663;mismatches=1;indels=0;unknowns=0;Target=comp146106_c0_seq1 664 1 .;CDS_Target=comp146106_c0_seq1 621 478 .;locus=RLOC_00018634
Chr2	stalkie_big_nohaplotig	exon	77434304	77434967	99	-	.	Parent=comp146106_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77434347	77434490	.	-	0	Parent=comp146106_c0_seq1.mrna1
Chr2	gffcl	locus	77436385	77437104	.	-	.	ID=RLOC_00018635;geneIDs=comp147234_c0_seq1.path1;transcripts=comp147234_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77436385	77437104	.	-	.	ID=comp147234_c0_seq1.mrna1;geneID=comp147234_c0_seq1.path1;Name=comp147234_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=718;mismatches=2;indels=0;unknowns=0;Target=comp147234_c0_seq1 720 1 .;CDS_Target=comp147234_c0_seq1 288 124 .;locus=RLOC_00018635
Chr2	stalkie_big_nohaplotig	exon	77436385	77437104	99	-	.	Parent=comp147234_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77436817	77436981	.	-	0	Parent=comp147234_c0_seq1.mrna1
Chr2	gffcl	locus	77437210	77438459	.	+	.	ID=RLOC_00018636;geneIDs=comp153158_c0_seq1.path1;transcripts=comp153158_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77437210	77438459	.	+	.	ID=comp153158_c0_seq1.mrna1;geneID=comp153158_c0_seq1.path1;Name=comp153158_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1249;mismatches=1;indels=14;unknowns=0;Target=comp153158_c0_seq1 1264 1 .;CDS_Target=comp153158_c0_seq1 459 358 .;locus=RLOC_00018636
Chr2	stalkie_big_nohaplotig	exon	77437210	77438459	98	+	.	Parent=comp153158_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77437567	77437668	.	+	0	Parent=comp153158_c0_seq1.mrna1
Chr2	gffcl	locus	77438953	77555226	.	-	.	ID=RLOC_00018637;geneIDs=FBgn0037949.1.path1,FBgn0262582.1.path2,comp161709_c1_seq1.path1;transcripts=comp161709_c1_seq1.mrna1,FBgn0262582.1.mrna2,FBgn0037949.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77438953	77555226	.	-	.	ID=comp161709_c1_seq1.mrna1;geneID=comp161709_c1_seq1.path1;Name=comp161709_c1_seq1;Dir=antisensecoverage=98.5;identity=99.9;matches=6759;mismatches=9;indels=0;unknowns=0;locus=RLOC_00018637
Chr2	stalkie_big_nohaplotig	exon	77438953	77439409	99	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 32 488 -
Chr2	stalkie_big_nohaplotig	exon	77442050	77442233	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 489 672 -
Chr2	stalkie_big_nohaplotig	exon	77442307	77442491	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 673 857 -
Chr2	stalkie_big_nohaplotig	exon	77442562	77442657	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 858 953 -
Chr2	stalkie_big_nohaplotig	exon	77442733	77442896	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 954 1117 -
Chr2	stalkie_big_nohaplotig	exon	77442963	77443263	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 1118 1418 -
Chr2	stalkie_big_nohaplotig	exon	77443321	77443545	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 1419 1643 -
Chr2	stalkie_big_nohaplotig	exon	77443626	77443821	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 1644 1839 -
Chr2	stalkie_big_nohaplotig	exon	77444006	77444232	99	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 1840 2066 -
Chr2	stalkie_big_nohaplotig	exon	77446342	77446587	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 2067 2312 -
Chr2	stalkie_big_nohaplotig	exon	77446725	77446998	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 2313 2586 -
Chr2	stalkie_big_nohaplotig	exon	77447069	77447272	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 2587 2790 -
Chr2	stalkie_big_nohaplotig	exon	77447357	77447881	99	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 2791 3315 -
Chr2	stalkie_big_nohaplotig	exon	77447954	77448588	99	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 3316 3950 -
Chr2	stalkie_big_nohaplotig	exon	77448681	77449514	99	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 3951 4784 -
Chr2	stalkie_big_nohaplotig	exon	77450524	77450654	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 4785 4915 -
Chr2	stalkie_big_nohaplotig	exon	77450780	77450986	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 4916 5122 -
Chr2	stalkie_big_nohaplotig	exon	77451357	77452210	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 5123 5976 -
Chr2	stalkie_big_nohaplotig	exon	77452290	77452433	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 5977 6120 -
Chr2	stalkie_big_nohaplotig	exon	77452534	77452957	99	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 6121 6544 -
Chr2	stalkie_big_nohaplotig	exon	77453022	77453175	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 6545 6698 -
Chr2	stalkie_big_nohaplotig	exon	77454199	77454208	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 6728 6737 -
Chr2	stalkie_big_nohaplotig	exon	77454219	77454221	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 6765 6767 -
Chr2	stalkie_big_nohaplotig	exon	77457703	77457710	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 6768 6775 -
Chr2	stalkie_big_nohaplotig	exon	77457729	77457733	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 6824 6828 -
Chr2	stalkie_big_nohaplotig	exon	77473334	77473343	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 6829 6838 -
Chr2	stalkie_big_nohaplotig	exon	77473359	77473360	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 6853 6854 -
Chr2	stalkie_big_nohaplotig	exon	77474398	77474400	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 6855 6857 -
Chr2	stalkie_big_nohaplotig	exon	77480232	77480239	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 6858 6865 -
Chr2	stalkie_big_nohaplotig	exon	77486834	77486836	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 6866 6868 -
Chr2	stalkie_big_nohaplotig	exon	77517235	77517237	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 6869 6871 -
Chr2	stalkie_big_nohaplotig	exon	77531135	77531142	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 6872 6879 -
Chr2	stalkie_big_nohaplotig	exon	77538281	77538282	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 6880 6881 -
Chr2	stalkie_big_nohaplotig	exon	77553478	77553486	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 6882 6890 -
Chr2	stalkie_big_nohaplotig	exon	77553540	77553547	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 6942 6949 -
Chr2	stalkie_big_nohaplotig	exon	77555026	77555027	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 6960 6961 -
Chr2	stalkie_big_nohaplotig	exon	77555204	77555211	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 6962 6969 -
Chr2	stalkie_big_nohaplotig	exon	77555218	77555226	100	-	.	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 7010 7018 -
Chr2	stalkie_big_nohaplotig	CDS	77439348	77439409	.	-	2	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 427 488 .
Chr2	stalkie_big_nohaplotig	CDS	77442050	77442233	.	-	0	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 489 672 .
Chr2	stalkie_big_nohaplotig	CDS	77442307	77442491	.	-	2	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 673 857 .
Chr2	stalkie_big_nohaplotig	CDS	77442562	77442657	.	-	2	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 858 953 .
Chr2	stalkie_big_nohaplotig	CDS	77442733	77442896	.	-	1	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 954 1117 .
Chr2	stalkie_big_nohaplotig	CDS	77442963	77443263	.	-	2	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 1118 1418 .
Chr2	stalkie_big_nohaplotig	CDS	77443321	77443545	.	-	2	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 1419 1643 .
Chr2	stalkie_big_nohaplotig	CDS	77443626	77443821	.	-	0	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 1644 1839 .
Chr2	stalkie_big_nohaplotig	CDS	77444006	77444232	.	-	2	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 1840 2066 .
Chr2	stalkie_big_nohaplotig	CDS	77446342	77446587	.	-	2	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 2067 2312 .
Chr2	stalkie_big_nohaplotig	CDS	77446725	77446998	.	-	0	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 2313 2586 .
Chr2	stalkie_big_nohaplotig	CDS	77447069	77447272	.	-	0	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 2587 2790 .
Chr2	stalkie_big_nohaplotig	CDS	77447357	77447881	.	-	0	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 2791 3315 .
Chr2	stalkie_big_nohaplotig	CDS	77447954	77448588	.	-	2	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 3316 3950 .
Chr2	stalkie_big_nohaplotig	CDS	77448681	77449514	.	-	2	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 3951 4784 .
Chr2	stalkie_big_nohaplotig	CDS	77450524	77450654	.	-	1	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 4785 4915 .
Chr2	stalkie_big_nohaplotig	CDS	77450780	77450986	.	-	1	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 4916 5122 .
Chr2	stalkie_big_nohaplotig	CDS	77451357	77452210	.	-	0	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 5123 5976 .
Chr2	stalkie_big_nohaplotig	CDS	77452290	77452433	.	-	0	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 5977 6120 .
Chr2	stalkie_big_nohaplotig	CDS	77452534	77452957	.	-	1	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 6121 6544 .
Chr2	stalkie_big_nohaplotig	CDS	77453022	77453164	.	-	0	Parent=comp161709_c1_seq1.mrna1;Target=comp161709_c1_seq1 6545 6687 .
Chr2	stalkie_big_nohaplotig	mRNA	77439351	77453171	.	-	.	ID=FBgn0262582.1.mrna2;geneID=FBgn0262582.1.path2;Name=FBgn0262582.1;Dir=sensecoverage=94.0;identity=99.9;matches=6231;mismatches=7;indels=0;unknowns=0;locus=RLOC_00018637
Chr2	stalkie_big_nohaplotig	exon	77439351	77439382	100	-	.	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 6608 6639 +
Chr2	stalkie_big_nohaplotig	exon	77442050	77442233	100	-	.	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 6424 6607 +
Chr2	stalkie_big_nohaplotig	exon	77442307	77442491	100	-	.	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 6239 6423 +
Chr2	stalkie_big_nohaplotig	exon	77442562	77442657	100	-	.	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 6143 6238 +
Chr2	stalkie_big_nohaplotig	exon	77442733	77442896	100	-	.	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 5979 6142 +
Chr2	stalkie_big_nohaplotig	exon	77442963	77443263	100	-	.	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 5678 5978 +
Chr2	stalkie_big_nohaplotig	exon	77443321	77443545	100	-	.	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 5453 5677 +
Chr2	stalkie_big_nohaplotig	exon	77443626	77443821	100	-	.	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 5257 5452 +
Chr2	stalkie_big_nohaplotig	exon	77444006	77444232	99	-	.	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 5030 5256 +
Chr2	stalkie_big_nohaplotig	exon	77446342	77446587	100	-	.	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 4784 5029 +
Chr2	stalkie_big_nohaplotig	exon	77446725	77446998	100	-	.	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 4510 4783 +
Chr2	stalkie_big_nohaplotig	exon	77447069	77447272	100	-	.	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 4306 4509 +
Chr2	stalkie_big_nohaplotig	exon	77447357	77447881	99	-	.	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 3781 4305 +
Chr2	stalkie_big_nohaplotig	exon	77447954	77448588	99	-	.	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 3146 3780 +
Chr2	stalkie_big_nohaplotig	exon	77448681	77449514	99	-	.	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 2312 3145 +
Chr2	stalkie_big_nohaplotig	exon	77450524	77450654	100	-	.	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 2181 2311 +
Chr2	stalkie_big_nohaplotig	exon	77450780	77450986	100	-	.	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 1974 2180 +
Chr2	stalkie_big_nohaplotig	exon	77451357	77452210	100	-	.	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 1120 1973 +
Chr2	stalkie_big_nohaplotig	exon	77452290	77452433	100	-	.	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 976 1119 +
Chr2	stalkie_big_nohaplotig	exon	77452534	77452957	99	-	.	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 552 975 +
Chr2	stalkie_big_nohaplotig	exon	77453022	77453171	100	-	.	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 402 551 +
Chr2	stalkie_big_nohaplotig	CDS	77439351	77439382	.	-	0	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 6608 6639 +
Chr2	stalkie_big_nohaplotig	CDS	77442050	77442233	.	-	1	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 6424 6607 +
Chr2	stalkie_big_nohaplotig	CDS	77442307	77442491	.	-	0	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 6239 6423 +
Chr2	stalkie_big_nohaplotig	CDS	77442562	77442657	.	-	0	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 6143 6238 +
Chr2	stalkie_big_nohaplotig	CDS	77442733	77442896	.	-	2	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 5979 6142 +
Chr2	stalkie_big_nohaplotig	CDS	77442963	77443263	.	-	0	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 5678 5978 +
Chr2	stalkie_big_nohaplotig	CDS	77443321	77443545	.	-	0	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 5453 5677 +
Chr2	stalkie_big_nohaplotig	CDS	77443626	77443821	.	-	1	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 5257 5452 +
Chr2	stalkie_big_nohaplotig	CDS	77444006	77444232	.	-	0	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 5030 5256 +
Chr2	stalkie_big_nohaplotig	CDS	77446342	77446587	.	-	0	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 4784 5029 +
Chr2	stalkie_big_nohaplotig	CDS	77446725	77446998	.	-	1	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 4510 4783 +
Chr2	stalkie_big_nohaplotig	CDS	77447069	77447272	.	-	1	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 4306 4509 +
Chr2	stalkie_big_nohaplotig	CDS	77447357	77447881	.	-	1	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 3781 4305 +
Chr2	stalkie_big_nohaplotig	CDS	77447954	77448588	.	-	0	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 3146 3780 +
Chr2	stalkie_big_nohaplotig	CDS	77448681	77449514	.	-	0	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 2312 3145 +
Chr2	stalkie_big_nohaplotig	CDS	77450524	77450654	.	-	2	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 2181 2311 +
Chr2	stalkie_big_nohaplotig	CDS	77450780	77450986	.	-	2	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 1974 2180 +
Chr2	stalkie_big_nohaplotig	CDS	77451357	77452210	.	-	1	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 1120 1973 +
Chr2	stalkie_big_nohaplotig	CDS	77452290	77452433	.	-	1	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 976 1119 +
Chr2	stalkie_big_nohaplotig	CDS	77452534	77452957	.	-	2	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 552 975 +
Chr2	stalkie_big_nohaplotig	CDS	77453022	77453171	.	-	2	Parent=FBgn0262582.1.mrna2;Target=FBgn0262582.1 402 551 +
Chr2	stalkie_big_nohaplotig	mRNA	77453332	77458327	.	-	.	ID=FBgn0037949.1.mrna1;geneID=FBgn0037949.1.path1;Name=FBgn0037949.1;Dir=sensecoverage=100.0;identity=100.0;matches=4343;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018637
Chr2	stalkie_big_nohaplotig	exon	77453332	77453457	100	-	.	Parent=FBgn0037949.1.mrna1;Target=FBgn0037949.1 4219 4344 +
Chr2	stalkie_big_nohaplotig	exon	77453527	77453946	100	-	.	Parent=FBgn0037949.1.mrna1;Target=FBgn0037949.1 3799 4218 +
Chr2	stalkie_big_nohaplotig	exon	77454075	77454269	100	-	.	Parent=FBgn0037949.1.mrna1;Target=FBgn0037949.1 3604 3798 +
Chr2	stalkie_big_nohaplotig	exon	77454337	77454550	100	-	.	Parent=FBgn0037949.1.mrna1;Target=FBgn0037949.1 3390 3603 +
Chr2	stalkie_big_nohaplotig	exon	77454616	77455001	99	-	.	Parent=FBgn0037949.1.mrna1;Target=FBgn0037949.1 3004 3389 +
Chr2	stalkie_big_nohaplotig	exon	77455067	77455219	100	-	.	Parent=FBgn0037949.1.mrna1;Target=FBgn0037949.1 2851 3003 +
Chr2	stalkie_big_nohaplotig	exon	77455321	77456174	100	-	.	Parent=FBgn0037949.1.mrna1;Target=FBgn0037949.1 1997 2850 +
Chr2	stalkie_big_nohaplotig	exon	77456261	77457208	100	-	.	Parent=FBgn0037949.1.mrna1;Target=FBgn0037949.1 1049 1996 +
Chr2	stalkie_big_nohaplotig	exon	77457280	77458327	100	-	.	Parent=FBgn0037949.1.mrna1;Target=FBgn0037949.1 1 1048 +
Chr2	stalkie_big_nohaplotig	CDS	77453332	77453457	.	-	0	Parent=FBgn0037949.1.mrna1;Target=FBgn0037949.1 4219 4344 +
Chr2	stalkie_big_nohaplotig	CDS	77453527	77453946	.	-	0	Parent=FBgn0037949.1.mrna1;Target=FBgn0037949.1 3799 4218 +
Chr2	stalkie_big_nohaplotig	CDS	77454075	77454269	.	-	0	Parent=FBgn0037949.1.mrna1;Target=FBgn0037949.1 3604 3798 +
Chr2	stalkie_big_nohaplotig	CDS	77454337	77454550	.	-	1	Parent=FBgn0037949.1.mrna1;Target=FBgn0037949.1 3390 3603 +
Chr2	stalkie_big_nohaplotig	CDS	77454616	77455001	.	-	0	Parent=FBgn0037949.1.mrna1;Target=FBgn0037949.1 3004 3389 +
Chr2	stalkie_big_nohaplotig	CDS	77455067	77455219	.	-	0	Parent=FBgn0037949.1.mrna1;Target=FBgn0037949.1 2851 3003 +
Chr2	stalkie_big_nohaplotig	CDS	77455321	77456174	.	-	2	Parent=FBgn0037949.1.mrna1;Target=FBgn0037949.1 1997 2850 +
Chr2	stalkie_big_nohaplotig	CDS	77456261	77457208	.	-	2	Parent=FBgn0037949.1.mrna1;Target=FBgn0037949.1 1049 1996 +
Chr2	stalkie_big_nohaplotig	CDS	77457280	77458327	.	-	0	Parent=FBgn0037949.1.mrna1;Target=FBgn0037949.1 1 1048 +
Chr2	gffcl	locus	77460750	77464897	.	+	.	ID=RLOC_00018639;geneIDs=FBgn0037950.1.path1;transcripts=FBgn0037950.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77460750	77464897	.	+	.	ID=FBgn0037950.1.mrna1;geneID=FBgn0037950.1.path1;Name=FBgn0037950.1;Dir=sensecoverage=93.6;identity=99.8;matches=1272;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018639
Chr2	stalkie_big_nohaplotig	exon	77460750	77460871	99	+	.	Parent=FBgn0037950.1.mrna1;Target=FBgn0037950.1 88 209 +
Chr2	stalkie_big_nohaplotig	exon	77461323	77461506	100	+	.	Parent=FBgn0037950.1.mrna1;Target=FBgn0037950.1 210 393 +
Chr2	stalkie_big_nohaplotig	exon	77461562	77461788	100	+	.	Parent=FBgn0037950.1.mrna1;Target=FBgn0037950.1 394 620 +
Chr2	stalkie_big_nohaplotig	exon	77463643	77463725	98	+	.	Parent=FBgn0037950.1.mrna1;Target=FBgn0037950.1 621 703 +
Chr2	stalkie_big_nohaplotig	exon	77463783	77463917	100	+	.	Parent=FBgn0037950.1.mrna1;Target=FBgn0037950.1 704 838 +
Chr2	stalkie_big_nohaplotig	exon	77464323	77464702	100	+	.	Parent=FBgn0037950.1.mrna1;Target=FBgn0037950.1 839 1218 +
Chr2	stalkie_big_nohaplotig	exon	77464754	77464897	99	+	.	Parent=FBgn0037950.1.mrna1;Target=FBgn0037950.1 1219 1362 +
Chr2	stalkie_big_nohaplotig	CDS	77460750	77460871	.	+	0	Parent=FBgn0037950.1.mrna1;Target=FBgn0037950.1 88 209 +
Chr2	stalkie_big_nohaplotig	CDS	77461323	77461506	.	+	1	Parent=FBgn0037950.1.mrna1;Target=FBgn0037950.1 210 393 +
Chr2	stalkie_big_nohaplotig	CDS	77461562	77461788	.	+	0	Parent=FBgn0037950.1.mrna1;Target=FBgn0037950.1 394 620 +
Chr2	stalkie_big_nohaplotig	CDS	77463643	77463725	.	+	1	Parent=FBgn0037950.1.mrna1;Target=FBgn0037950.1 621 703 +
Chr2	stalkie_big_nohaplotig	CDS	77463783	77463917	.	+	2	Parent=FBgn0037950.1.mrna1;Target=FBgn0037950.1 704 838 +
Chr2	stalkie_big_nohaplotig	CDS	77464323	77464702	.	+	2	Parent=FBgn0037950.1.mrna1;Target=FBgn0037950.1 839 1218 +
Chr2	stalkie_big_nohaplotig	CDS	77464754	77464897	.	+	0	Parent=FBgn0037950.1.mrna1;Target=FBgn0037950.1 1219 1362 +
Chr2	gffcl	locus	77462069	77462452	.	-	.	ID=RLOC_00018640;geneIDs=comp150652_c0_seq1.path1;transcripts=comp150652_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77462069	77462452	.	-	.	ID=comp150652_c0_seq1.mrna1;geneID=comp150652_c0_seq1.path1;Name=comp150652_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=378;mismatches=6;indels=2;unknowns=0;Target=comp150652_c0_seq1 386 1 .;CDS_Target=comp150652_c0_seq1 79 2 .;locus=RLOC_00018640
Chr2	stalkie_big_nohaplotig	exon	77462069	77462452	97	-	.	Parent=comp150652_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77462374	77462451	.	-	0	Parent=comp150652_c0_seq1.mrna1
Chr2	gffcl	locus	77462632	77463446	.	-	.	ID=RLOC_00018641;geneIDs=comp143640_c0_seq1.path1;transcripts=comp143640_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77462632	77463446	.	-	.	ID=comp143640_c0_seq1.mrna1;geneID=comp143640_c0_seq1.path1;Name=comp143640_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=814;mismatches=1;indels=0;unknowns=0;Target=comp143640_c0_seq1 815 1 .;CDS_Target=comp143640_c0_seq1 354 223 .;locus=RLOC_00018641
Chr2	stalkie_big_nohaplotig	exon	77462632	77463446	99	-	.	Parent=comp143640_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77463093	77463224	.	-	0	Parent=comp143640_c0_seq1.mrna1
Chr2	gffcl	locus	77465505	77473219	.	-	.	ID=RLOC_00018642;geneIDs=FBgn0025802.1.path1;transcripts=FBgn0025802.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77465505	77473219	.	-	.	ID=FBgn0025802.1.mrna1;geneID=FBgn0025802.1.path1;Name=FBgn0025802.1;Dir=sensecoverage=100.0;identity=99.8;matches=5951;mismatches=10;indels=0;unknowns=0;locus=RLOC_00018642
Chr2	stalkie_big_nohaplotig	exon	77465505	77465594	100	-	.	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 5872 5961 +
Chr2	stalkie_big_nohaplotig	exon	77465671	77465753	100	-	.	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 5789 5871 +
Chr2	stalkie_big_nohaplotig	exon	77465823	77465947	100	-	.	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 5664 5788 +
Chr2	stalkie_big_nohaplotig	exon	77466025	77466931	99	-	.	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 4757 5663 +
Chr2	stalkie_big_nohaplotig	exon	77467043	77467726	100	-	.	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 4073 4756 +
Chr2	stalkie_big_nohaplotig	exon	77467797	77468165	100	-	.	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 3704 4072 +
Chr2	stalkie_big_nohaplotig	exon	77468233	77469057	99	-	.	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 2879 3703 +
Chr2	stalkie_big_nohaplotig	exon	77469129	77469532	99	-	.	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 2475 2878 +
Chr2	stalkie_big_nohaplotig	exon	77469619	77469773	99	-	.	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 2320 2474 +
Chr2	stalkie_big_nohaplotig	exon	77469855	77470209	100	-	.	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 1965 2319 +
Chr2	stalkie_big_nohaplotig	exon	77470580	77470764	100	-	.	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 1780 1964 +
Chr2	stalkie_big_nohaplotig	exon	77470818	77471123	99	-	.	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 1474 1779 +
Chr2	stalkie_big_nohaplotig	exon	77471192	77471435	100	-	.	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 1230 1473 +
Chr2	stalkie_big_nohaplotig	exon	77471493	77471867	100	-	.	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 855 1229 +
Chr2	stalkie_big_nohaplotig	exon	77471927	77472053	100	-	.	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 728 854 +
Chr2	stalkie_big_nohaplotig	exon	77472117	77472336	99	-	.	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 508 727 +
Chr2	stalkie_big_nohaplotig	exon	77472451	77472759	99	-	.	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 199 507 +
Chr2	stalkie_big_nohaplotig	exon	77472820	77472920	100	-	.	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 98 198 +
Chr2	stalkie_big_nohaplotig	exon	77473123	77473219	100	-	.	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 1 97 +
Chr2	stalkie_big_nohaplotig	CDS	77465505	77465594	.	-	0	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 5872 5961 +
Chr2	stalkie_big_nohaplotig	CDS	77465671	77465753	.	-	2	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 5789 5871 +
Chr2	stalkie_big_nohaplotig	CDS	77465823	77465947	.	-	1	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 5664 5788 +
Chr2	stalkie_big_nohaplotig	CDS	77466025	77466931	.	-	2	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 4757 5663 +
Chr2	stalkie_big_nohaplotig	CDS	77467043	77467726	.	-	2	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 4073 4756 +
Chr2	stalkie_big_nohaplotig	CDS	77467797	77468165	.	-	2	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 3704 4072 +
Chr2	stalkie_big_nohaplotig	CDS	77468233	77469057	.	-	2	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 2879 3703 +
Chr2	stalkie_big_nohaplotig	CDS	77469129	77469532	.	-	1	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 2475 2878 +
Chr2	stalkie_big_nohaplotig	CDS	77469619	77469773	.	-	0	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 2320 2474 +
Chr2	stalkie_big_nohaplotig	CDS	77469855	77470209	.	-	1	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 1965 2319 +
Chr2	stalkie_big_nohaplotig	CDS	77470580	77470764	.	-	0	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 1780 1964 +
Chr2	stalkie_big_nohaplotig	CDS	77470818	77471123	.	-	0	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 1474 1779 +
Chr2	stalkie_big_nohaplotig	CDS	77471192	77471435	.	-	1	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 1230 1473 +
Chr2	stalkie_big_nohaplotig	CDS	77471493	77471867	.	-	1	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 855 1229 +
Chr2	stalkie_big_nohaplotig	CDS	77471927	77472053	.	-	2	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 728 854 +
Chr2	stalkie_big_nohaplotig	CDS	77472117	77472336	.	-	0	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 508 727 +
Chr2	stalkie_big_nohaplotig	CDS	77472451	77472759	.	-	0	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 199 507 +
Chr2	stalkie_big_nohaplotig	CDS	77472820	77472920	.	-	2	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 98 198 +
Chr2	stalkie_big_nohaplotig	CDS	77473123	77473219	.	-	0	Parent=FBgn0025802.1.mrna1;Target=FBgn0025802.1 1 97 +
Chr2	gffcl	locus	77480340	77483412	.	-	.	ID=RLOC_00018643;geneIDs=FBgn0051159.1.path1,comp158789_c2_seq1.path1;transcripts=FBgn0051159.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77480428	77483412	.	-	.	ID=FBgn0051159.1.mrna1;geneID=FBgn0051159.1.path1;Name=FBgn0051159.1;Dir=sensecoverage=99.9;identity=99.7;matches=2340;mismatches=6;indels=0;unknowns=0;locus=RLOC_00018643
Chr2	stalkie_big_nohaplotig	exon	77480428	77480589	99	-	.	Parent=FBgn0051159.1.mrna1;Target=FBgn0051159.1 2188 2349 +
Chr2	stalkie_big_nohaplotig	exon	77480650	77480796	100	-	.	Parent=FBgn0051159.1.mrna1;Target=FBgn0051159.1 2041 2187 +
Chr2	stalkie_big_nohaplotig	exon	77480855	77481068	100	-	.	Parent=FBgn0051159.1.mrna1;Target=FBgn0051159.1 1827 2040 +
Chr2	stalkie_big_nohaplotig	exon	77481163	77481373	100	-	.	Parent=FBgn0051159.1.mrna1;Target=FBgn0051159.1 1616 1826 +
Chr2	stalkie_big_nohaplotig	exon	77481455	77481755	100	-	.	Parent=FBgn0051159.1.mrna1;Target=FBgn0051159.1 1315 1615 +
Chr2	stalkie_big_nohaplotig	exon	77481823	77482045	100	-	.	Parent=FBgn0051159.1.mrna1;Target=FBgn0051159.1 1092 1314 +
Chr2	stalkie_big_nohaplotig	exon	77482105	77482477	99	-	.	Parent=FBgn0051159.1.mrna1;Target=FBgn0051159.1 719 1091 +
Chr2	stalkie_big_nohaplotig	exon	77482540	77482832	99	-	.	Parent=FBgn0051159.1.mrna1;Target=FBgn0051159.1 426 718 +
Chr2	stalkie_big_nohaplotig	exon	77482881	77483043	99	-	.	Parent=FBgn0051159.1.mrna1;Target=FBgn0051159.1 263 425 +
Chr2	stalkie_big_nohaplotig	exon	77483096	77483332	99	-	.	Parent=FBgn0051159.1.mrna1;Target=FBgn0051159.1 26 262 +
Chr2	stalkie_big_nohaplotig	exon	77483391	77483412	100	-	.	Parent=FBgn0051159.1.mrna1;Target=FBgn0051159.1 4 25 +
Chr2	stalkie_big_nohaplotig	CDS	77480428	77480589	.	-	0	Parent=FBgn0051159.1.mrna1;Target=FBgn0051159.1 2188 2349 +
Chr2	stalkie_big_nohaplotig	CDS	77480650	77480796	.	-	0	Parent=FBgn0051159.1.mrna1;Target=FBgn0051159.1 2041 2187 +
Chr2	stalkie_big_nohaplotig	CDS	77480855	77481068	.	-	1	Parent=FBgn0051159.1.mrna1;Target=FBgn0051159.1 1827 2040 +
Chr2	stalkie_big_nohaplotig	CDS	77481163	77481373	.	-	2	Parent=FBgn0051159.1.mrna1;Target=FBgn0051159.1 1616 1826 +
Chr2	stalkie_big_nohaplotig	CDS	77481455	77481755	.	-	0	Parent=FBgn0051159.1.mrna1;Target=FBgn0051159.1 1315 1615 +
Chr2	stalkie_big_nohaplotig	CDS	77481823	77482045	.	-	1	Parent=FBgn0051159.1.mrna1;Target=FBgn0051159.1 1092 1314 +
Chr2	stalkie_big_nohaplotig	CDS	77482105	77482477	.	-	2	Parent=FBgn0051159.1.mrna1;Target=FBgn0051159.1 719 1091 +
Chr2	stalkie_big_nohaplotig	CDS	77482540	77482832	.	-	1	Parent=FBgn0051159.1.mrna1;Target=FBgn0051159.1 426 718 +
Chr2	stalkie_big_nohaplotig	CDS	77482881	77483043	.	-	2	Parent=FBgn0051159.1.mrna1;Target=FBgn0051159.1 263 425 +
Chr2	stalkie_big_nohaplotig	CDS	77483096	77483332	.	-	2	Parent=FBgn0051159.1.mrna1;Target=FBgn0051159.1 26 262 +
Chr2	stalkie_big_nohaplotig	CDS	77483391	77483412	.	-	0	Parent=FBgn0051159.1.mrna1;Target=FBgn0051159.1 4 25 +
Chr2	gffcl	locus	77486443	77488996	.	+	.	ID=RLOC_00018644;geneIDs=FBgn0051156.1.path1;transcripts=FBgn0051156.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77486443	77488996	.	+	.	ID=FBgn0051156.1.mrna1;geneID=FBgn0051156.1.path1;Name=FBgn0051156.1;Dir=sensecoverage=100.0;identity=99.8;matches=2069;mismatches=3;indels=1;unknowns=0;locus=RLOC_00018644
Chr2	stalkie_big_nohaplotig	exon	77486443	77486630	100	+	.	Parent=FBgn0051156.1.mrna1;Target=FBgn0051156.1 1 188 +
Chr2	stalkie_big_nohaplotig	exon	77486692	77486951	100	+	.	Parent=FBgn0051156.1.mrna1;Target=FBgn0051156.1 189 448 +
Chr2	stalkie_big_nohaplotig	exon	77487015	77487328	100	+	.	Parent=FBgn0051156.1.mrna1;Target=FBgn0051156.1 449 762 +
Chr2	stalkie_big_nohaplotig	exon	77487378	77487616	99	+	.	Parent=FBgn0051156.1.mrna1;Target=FBgn0051156.1 763 1001 +
Chr2	stalkie_big_nohaplotig	exon	77487678	77488021	100	+	.	Parent=FBgn0051156.1.mrna1;Target=FBgn0051156.1 1002 1345 +
Chr2	stalkie_big_nohaplotig	exon	77488085	77488367	100	+	.	Parent=FBgn0051156.1.mrna1;Target=FBgn0051156.1 1346 1628 +
Chr2	stalkie_big_nohaplotig	exon	77488421	77488620	100	+	.	Parent=FBgn0051156.1.mrna1;Target=FBgn0051156.1 1629 1828 +
Chr2	stalkie_big_nohaplotig	exon	77488701	77488890	98	+	.	Parent=FBgn0051156.1.mrna1;Target=FBgn0051156.1 1829 2018 +
Chr2	stalkie_big_nohaplotig	exon	77488943	77488996	98	+	.	Parent=FBgn0051156.1.mrna1;Target=FBgn0051156.1 2019 2073 +
Chr2	stalkie_big_nohaplotig	CDS	77486443	77486630	.	+	0	Parent=FBgn0051156.1.mrna1;Target=FBgn0051156.1 1 188 +
Chr2	stalkie_big_nohaplotig	CDS	77486692	77486951	.	+	1	Parent=FBgn0051156.1.mrna1;Target=FBgn0051156.1 189 448 +
Chr2	stalkie_big_nohaplotig	CDS	77487015	77487328	.	+	2	Parent=FBgn0051156.1.mrna1;Target=FBgn0051156.1 449 762 +
Chr2	stalkie_big_nohaplotig	CDS	77487378	77487616	.	+	0	Parent=FBgn0051156.1.mrna1;Target=FBgn0051156.1 763 1001 +
Chr2	stalkie_big_nohaplotig	CDS	77487678	77488021	.	+	1	Parent=FBgn0051156.1.mrna1;Target=FBgn0051156.1 1002 1345 +
Chr2	stalkie_big_nohaplotig	CDS	77488085	77488367	.	+	2	Parent=FBgn0051156.1.mrna1;Target=FBgn0051156.1 1346 1628 +
Chr2	stalkie_big_nohaplotig	CDS	77488421	77488620	.	+	1	Parent=FBgn0051156.1.mrna1;Target=FBgn0051156.1 1629 1828 +
Chr2	stalkie_big_nohaplotig	CDS	77488701	77488890	.	+	2	Parent=FBgn0051156.1.mrna1;Target=FBgn0051156.1 1829 2018 +
Chr2	stalkie_big_nohaplotig	CDS	77488943	77488996	.	+	1	Parent=FBgn0051156.1.mrna1;Target=FBgn0051156.1 2019 2073 +
Chr2	gffcl	locus	77493584	77503647	.	-	.	ID=RLOC_00018645;geneIDs=FBgn0051158.1.path1;transcripts=FBgn0051158.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77493584	77503647	.	-	.	ID=FBgn0051158.1.mrna1;geneID=FBgn0051158.1.path1;Name=FBgn0051158.1;Dir=sensecoverage=99.5;identity=99.8;matches=4246;mismatches=7;indels=3;unknowns=0;locus=RLOC_00018645
Chr2	stalkie_big_nohaplotig	exon	77493584	77493810	98	-	.	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 4030 4253 +
Chr2	stalkie_big_nohaplotig	exon	77493870	77494007	100	-	.	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 3892 4029 +
Chr2	stalkie_big_nohaplotig	exon	77494113	77494388	99	-	.	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 3616 3891 +
Chr2	stalkie_big_nohaplotig	exon	77494480	77494577	100	-	.	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 3518 3615 +
Chr2	stalkie_big_nohaplotig	exon	77494644	77494816	100	-	.	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 3345 3517 +
Chr2	stalkie_big_nohaplotig	exon	77494882	77495074	100	-	.	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 3152 3344 +
Chr2	stalkie_big_nohaplotig	exon	77495136	77495329	100	-	.	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 2958 3151 +
Chr2	stalkie_big_nohaplotig	exon	77495388	77495847	99	-	.	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 2498 2957 +
Chr2	stalkie_big_nohaplotig	exon	77496043	77496373	100	-	.	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 2167 2497 +
Chr2	stalkie_big_nohaplotig	exon	77497755	77498969	99	-	.	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 952 2166 +
Chr2	stalkie_big_nohaplotig	exon	77499045	77499727	100	-	.	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 269 951 +
Chr2	stalkie_big_nohaplotig	exon	77499787	77499840	100	-	.	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 215 268 +
Chr2	stalkie_big_nohaplotig	exon	77499907	77499973	98	-	.	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 148 214 +
Chr2	stalkie_big_nohaplotig	exon	77503501	77503647	100	-	.	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 1 147 +
Chr2	stalkie_big_nohaplotig	CDS	77493586	77493810	.	-	0	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 4030 4251 +
Chr2	stalkie_big_nohaplotig	CDS	77493870	77494007	.	-	0	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 3892 4029 +
Chr2	stalkie_big_nohaplotig	CDS	77494113	77494388	.	-	0	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 3616 3891 +
Chr2	stalkie_big_nohaplotig	CDS	77494480	77494577	.	-	2	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 3518 3615 +
Chr2	stalkie_big_nohaplotig	CDS	77494644	77494816	.	-	1	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 3345 3517 +
Chr2	stalkie_big_nohaplotig	CDS	77494882	77495074	.	-	2	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 3152 3344 +
Chr2	stalkie_big_nohaplotig	CDS	77495136	77495329	.	-	1	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 2958 3151 +
Chr2	stalkie_big_nohaplotig	CDS	77495388	77495847	.	-	2	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 2498 2957 +
Chr2	stalkie_big_nohaplotig	CDS	77496043	77496373	.	-	0	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 2167 2497 +
Chr2	stalkie_big_nohaplotig	CDS	77497755	77498969	.	-	0	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 952 2166 +
Chr2	stalkie_big_nohaplotig	CDS	77499045	77499727	.	-	2	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 269 951 +
Chr2	stalkie_big_nohaplotig	CDS	77499787	77499840	.	-	2	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 215 268 +
Chr2	stalkie_big_nohaplotig	CDS	77499907	77499973	.	-	0	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 148 214 +
Chr2	stalkie_big_nohaplotig	CDS	77503501	77503647	.	-	0	Parent=FBgn0051158.1.mrna1;Target=FBgn0051158.1 1 147 +
Chr2	gffcl	locus	77496676	79167754	.	-	.	ID=RLOC_00018646;geneIDs=comp150513_c0_seq1.path1,comp159593_c0_seq1.path1;transcripts=comp159593_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77496676	79167262	.	-	.	ID=comp159593_c0_seq1.mrna1;geneID=comp159593_c0_seq1.path1;Name=comp159593_c0_seq1;Dir=indeterminatecoverage=96.8;identity=98.4;matches=1265;mismatches=12;indels=8;unknowns=0;Target=comp159593_c0_seq1 720 619 .;locus=RLOC_00018646
Chr2	stalkie_big_nohaplotig	exon	77496676	77496680	100	-	.	Parent=comp159593_c0_seq1.mrna1;Target=comp159593_c0_seq1 1314 1310 .
Chr2	stalkie_big_nohaplotig	exon	77501914	77501922	100	-	.	Parent=comp159593_c0_seq1.mrna1;Target=comp159593_c0_seq1 1309 1301 .
Chr2	stalkie_big_nohaplotig	exon	77504384	77504393	100	-	.	Parent=comp159593_c0_seq1.mrna1;Target=comp159593_c0_seq1 1270 1261 .
Chr2	stalkie_big_nohaplotig	exon	79166011	79167262	98	-	.	Parent=comp159593_c0_seq1.mrna1;Target=comp159593_c0_seq1 1260 1 .
Chr2	stalkie_big_nohaplotig	CDS	79166551	79166652	.	-	0	Parent=comp159593_c0_seq1.mrna1
Chr2	gffcl	locus	77506680	77507575	.	+	.	ID=RLOC_00018647;geneIDs=FBgn0062442.1.path1;transcripts=FBgn0062442.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77506680	77507575	.	+	.	ID=FBgn0062442.1.mrna1;geneID=FBgn0062442.1.path1;Name=FBgn0062442.1;Dir=sensecoverage=100.0;identity=99.7;matches=395;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018647
Chr2	stalkie_big_nohaplotig	exon	77506680	77506779	100	+	.	Parent=FBgn0062442.1.mrna1;Target=FBgn0062442.1 1 100 +
Chr2	stalkie_big_nohaplotig	exon	77507215	77507429	99	+	.	Parent=FBgn0062442.1.mrna1;Target=FBgn0062442.1 101 315 +
Chr2	stalkie_big_nohaplotig	exon	77507495	77507575	100	+	.	Parent=FBgn0062442.1.mrna1;Target=FBgn0062442.1 316 396 +
Chr2	stalkie_big_nohaplotig	CDS	77506680	77506779	.	+	0	Parent=FBgn0062442.1.mrna1;Target=FBgn0062442.1 1 100 +
Chr2	stalkie_big_nohaplotig	CDS	77507215	77507429	.	+	2	Parent=FBgn0062442.1.mrna1;Target=FBgn0062442.1 101 315 +
Chr2	stalkie_big_nohaplotig	CDS	77507495	77507575	.	+	0	Parent=FBgn0062442.1.mrna1;Target=FBgn0062442.1 316 396 +
Chr2	gffcl	locus	77508000	77509573	.	-	.	ID=RLOC_00018648;geneIDs=FBgn0029176.1.path1;transcripts=FBgn0029176.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77508000	77509573	.	-	.	ID=FBgn0029176.1.mrna1;geneID=FBgn0029176.1.path1;Name=FBgn0029176.1;Dir=sensecoverage=100.0;identity=99.6;matches=1368;mismatches=6;indels=0;unknowns=0;locus=RLOC_00018648
Chr2	stalkie_big_nohaplotig	exon	77508000	77509118	99	-	.	Parent=FBgn0029176.1.mrna1;Target=FBgn0029176.1 256 1374 +
Chr2	stalkie_big_nohaplotig	exon	77509177	77509326	100	-	.	Parent=FBgn0029176.1.mrna1;Target=FBgn0029176.1 106 255 +
Chr2	stalkie_big_nohaplotig	exon	77509469	77509573	99	-	.	Parent=FBgn0029176.1.mrna1;Target=FBgn0029176.1 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	77508000	77509118	.	-	0	Parent=FBgn0029176.1.mrna1;Target=FBgn0029176.1 256 1374 +
Chr2	stalkie_big_nohaplotig	CDS	77509177	77509326	.	-	0	Parent=FBgn0029176.1.mrna1;Target=FBgn0029176.1 106 255 +
Chr2	stalkie_big_nohaplotig	CDS	77509469	77509573	.	-	0	Parent=FBgn0029176.1.mrna1;Target=FBgn0029176.1 1 105 +
Chr2	gffcl	locus	77512406	77517572	.	+	.	ID=RLOC_00018649;geneIDs=FBgn0028476.1.path1;transcripts=FBgn0028476.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77512406	77517572	.	+	.	ID=FBgn0028476.1.mrna1;geneID=FBgn0028476.1.path1;Name=FBgn0028476.1;Dir=sensecoverage=100.0;identity=99.7;matches=3260;mismatches=10;indels=0;unknowns=0;locus=RLOC_00018649
Chr2	stalkie_big_nohaplotig	exon	77512406	77512469	100	+	.	Parent=FBgn0028476.1.mrna1;Target=FBgn0028476.1 1 64 +
Chr2	stalkie_big_nohaplotig	exon	77513130	77513786	99	+	.	Parent=FBgn0028476.1.mrna1;Target=FBgn0028476.1 65 721 +
Chr2	stalkie_big_nohaplotig	exon	77513952	77514879	99	+	.	Parent=FBgn0028476.1.mrna1;Target=FBgn0028476.1 722 1649 +
Chr2	stalkie_big_nohaplotig	exon	77514951	77515497	100	+	.	Parent=FBgn0028476.1.mrna1;Target=FBgn0028476.1 1650 2196 +
Chr2	stalkie_big_nohaplotig	exon	77516499	77517572	99	+	.	Parent=FBgn0028476.1.mrna1;Target=FBgn0028476.1 2197 3270 +
Chr2	stalkie_big_nohaplotig	CDS	77512406	77512469	.	+	0	Parent=FBgn0028476.1.mrna1;Target=FBgn0028476.1 1 64 +
Chr2	stalkie_big_nohaplotig	CDS	77513130	77513786	.	+	2	Parent=FBgn0028476.1.mrna1;Target=FBgn0028476.1 65 721 +
Chr2	stalkie_big_nohaplotig	CDS	77513952	77514879	.	+	2	Parent=FBgn0028476.1.mrna1;Target=FBgn0028476.1 722 1649 +
Chr2	stalkie_big_nohaplotig	CDS	77514951	77515497	.	+	1	Parent=FBgn0028476.1.mrna1;Target=FBgn0028476.1 1650 2196 +
Chr2	stalkie_big_nohaplotig	CDS	77516499	77517572	.	+	0	Parent=FBgn0028476.1.mrna1;Target=FBgn0028476.1 2197 3270 +
Chr2	gffcl	locus	77521057	77522592	.	-	.	ID=RLOC_00018650;geneIDs=comp152962_c0_seq1.path1;transcripts=comp152962_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77521057	77522592	.	-	.	ID=comp152962_c0_seq1.mrna1;geneID=comp152962_c0_seq1.path1;Name=comp152962_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=1510;mismatches=22;indels=4;unknowns=0;Target=comp152962_c0_seq1 1532 1 .;CDS_Target=comp152962_c0_seq1 1380 1066 .;locus=RLOC_00018650
Chr2	stalkie_big_nohaplotig	exon	77521057	77522592	98	-	.	Parent=comp152962_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77521209	77521523	.	-	0	Parent=comp152962_c0_seq1.mrna1
Chr2	gffcl	locus	77526048	77540833	.	-	.	ID=RLOC_00018651;geneIDs=FBgn0263236.1.path1;transcripts=FBgn0263236.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77526048	77540833	.	-	.	ID=FBgn0263236.1.mrna1;geneID=FBgn0263236.1.path1;Name=FBgn0263236.1;Dir=sensecoverage=100.0;identity=99.6;matches=2862;mismatches=6;indels=6;unknowns=0;locus=RLOC_00018651
Chr2	stalkie_big_nohaplotig	exon	77526048	77526276	99	-	.	Parent=FBgn0263236.1.mrna1;Target=FBgn0263236.1 2643 2871 +
Chr2	stalkie_big_nohaplotig	exon	77526332	77526858	99	-	.	Parent=FBgn0263236.1.mrna1;Target=FBgn0263236.1 2116 2642 +
Chr2	stalkie_big_nohaplotig	exon	77528286	77529699	99	-	.	Parent=FBgn0263236.1.mrna1;Target=FBgn0263236.1 702 2115 +
Chr2	stalkie_big_nohaplotig	exon	77529823	77529978	96	-	.	Parent=FBgn0263236.1.mrna1;Target=FBgn0263236.1 546 701 +
Chr2	stalkie_big_nohaplotig	exon	77531220	77531718	99	-	.	Parent=FBgn0263236.1.mrna1;Target=FBgn0263236.1 47 545 +
Chr2	stalkie_big_nohaplotig	exon	77540788	77540833	100	-	.	Parent=FBgn0263236.1.mrna1;Target=FBgn0263236.1 1 46 +
Chr2	stalkie_big_nohaplotig	CDS	77526048	77526276	.	-	1	Parent=FBgn0263236.1.mrna1;Target=FBgn0263236.1 2643 2871 +
Chr2	stalkie_big_nohaplotig	CDS	77526332	77526858	.	-	0	Parent=FBgn0263236.1.mrna1;Target=FBgn0263236.1 2116 2642 +
Chr2	stalkie_big_nohaplotig	CDS	77528286	77529699	.	-	1	Parent=FBgn0263236.1.mrna1;Target=FBgn0263236.1 702 2115 +
Chr2	stalkie_big_nohaplotig	CDS	77529823	77529978	.	-	1	Parent=FBgn0263236.1.mrna1;Target=FBgn0263236.1 546 701 +
Chr2	stalkie_big_nohaplotig	CDS	77531220	77531718	.	-	2	Parent=FBgn0263236.1.mrna1;Target=FBgn0263236.1 47 545 +
Chr2	stalkie_big_nohaplotig	CDS	77540788	77540833	.	-	0	Parent=FBgn0263236.1.mrna1;Target=FBgn0263236.1 1 46 +
Chr2	gffcl	locus	77552242	77554281	.	+	.	ID=RLOC_00018652;geneIDs=FBgn0015270.1.path1;transcripts=FBgn0015270.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77552242	77554281	.	+	.	ID=FBgn0015270.1.mrna1;geneID=FBgn0015270.1.path1;Name=FBgn0015270.1;Dir=sensecoverage=100.0;identity=99.9;matches=1859;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018652
Chr2	stalkie_big_nohaplotig	exon	77552242	77552827	99	+	.	Parent=FBgn0015270.1.mrna1;Target=FBgn0015270.1 1 586 +
Chr2	stalkie_big_nohaplotig	exon	77552881	77553720	100	+	.	Parent=FBgn0015270.1.mrna1;Target=FBgn0015270.1 587 1426 +
Chr2	stalkie_big_nohaplotig	exon	77553781	77554014	100	+	.	Parent=FBgn0015270.1.mrna1;Target=FBgn0015270.1 1427 1660 +
Chr2	stalkie_big_nohaplotig	exon	77554082	77554281	100	+	.	Parent=FBgn0015270.1.mrna1;Target=FBgn0015270.1 1661 1860 +
Chr2	stalkie_big_nohaplotig	CDS	77552242	77552827	.	+	0	Parent=FBgn0015270.1.mrna1;Target=FBgn0015270.1 1 586 +
Chr2	stalkie_big_nohaplotig	CDS	77552881	77553720	.	+	2	Parent=FBgn0015270.1.mrna1;Target=FBgn0015270.1 587 1426 +
Chr2	stalkie_big_nohaplotig	CDS	77553781	77554014	.	+	2	Parent=FBgn0015270.1.mrna1;Target=FBgn0015270.1 1427 1660 +
Chr2	stalkie_big_nohaplotig	CDS	77554082	77554281	.	+	2	Parent=FBgn0015270.1.mrna1;Target=FBgn0015270.1 1661 1860 +
Chr2	gffcl	locus	77556192	77556673	.	-	.	ID=RLOC_00018653;geneIDs=comp145921_c0_seq1.path1;transcripts=comp145921_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77556192	77556673	.	-	.	ID=comp145921_c0_seq1.mrna1;geneID=comp145921_c0_seq1.path1;Name=comp145921_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=482;mismatches=0;indels=0;unknowns=0;Target=comp145921_c0_seq1 482 1 .;CDS_Target=comp145921_c0_seq1 166 104 .;locus=RLOC_00018653
Chr2	stalkie_big_nohaplotig	exon	77556192	77556673	100	-	.	Parent=comp145921_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77556508	77556570	.	-	0	Parent=comp145921_c0_seq1.mrna1
Chr2	gffcl	locus	77557748	77613786	.	-	.	ID=RLOC_00018654;geneIDs=FBgn0264493.1.path1;transcripts=FBgn0264493.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77557748	77613786	.	-	.	ID=FBgn0264493.1.mrna1;geneID=FBgn0264493.1.path1;Name=FBgn0264493.1;Dir=sensecoverage=100.0;identity=99.9;matches=1268;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018654
Chr2	stalkie_big_nohaplotig	exon	77557748	77557889	100	-	.	Parent=FBgn0264493.1.mrna1;Target=FBgn0264493.1 1128 1269 +
Chr2	stalkie_big_nohaplotig	exon	77559469	77559611	100	-	.	Parent=FBgn0264493.1.mrna1;Target=FBgn0264493.1 985 1127 +
Chr2	stalkie_big_nohaplotig	exon	77559687	77559865	100	-	.	Parent=FBgn0264493.1.mrna1;Target=FBgn0264493.1 806 984 +
Chr2	stalkie_big_nohaplotig	exon	77559934	77560229	100	-	.	Parent=FBgn0264493.1.mrna1;Target=FBgn0264493.1 510 805 +
Chr2	stalkie_big_nohaplotig	exon	77561827	77561988	99	-	.	Parent=FBgn0264493.1.mrna1;Target=FBgn0264493.1 348 509 +
Chr2	stalkie_big_nohaplotig	exon	77562053	77562174	100	-	.	Parent=FBgn0264493.1.mrna1;Target=FBgn0264493.1 226 347 +
Chr2	stalkie_big_nohaplotig	exon	77562804	77562954	100	-	.	Parent=FBgn0264493.1.mrna1;Target=FBgn0264493.1 75 225 +
Chr2	stalkie_big_nohaplotig	exon	77613713	77613786	100	-	.	Parent=FBgn0264493.1.mrna1;Target=FBgn0264493.1 1 74 +
Chr2	stalkie_big_nohaplotig	CDS	77557748	77557889	.	-	1	Parent=FBgn0264493.1.mrna1;Target=FBgn0264493.1 1128 1269 +
Chr2	stalkie_big_nohaplotig	CDS	77559469	77559611	.	-	0	Parent=FBgn0264493.1.mrna1;Target=FBgn0264493.1 985 1127 +
Chr2	stalkie_big_nohaplotig	CDS	77559687	77559865	.	-	2	Parent=FBgn0264493.1.mrna1;Target=FBgn0264493.1 806 984 +
Chr2	stalkie_big_nohaplotig	CDS	77559934	77560229	.	-	1	Parent=FBgn0264493.1.mrna1;Target=FBgn0264493.1 510 805 +
Chr2	stalkie_big_nohaplotig	CDS	77561827	77561988	.	-	1	Parent=FBgn0264493.1.mrna1;Target=FBgn0264493.1 348 509 +
Chr2	stalkie_big_nohaplotig	CDS	77562053	77562174	.	-	0	Parent=FBgn0264493.1.mrna1;Target=FBgn0264493.1 226 347 +
Chr2	stalkie_big_nohaplotig	CDS	77562804	77562954	.	-	1	Parent=FBgn0264493.1.mrna1;Target=FBgn0264493.1 75 225 +
Chr2	stalkie_big_nohaplotig	CDS	77613713	77613786	.	-	0	Parent=FBgn0264493.1.mrna1;Target=FBgn0264493.1 1 74 +
Chr2	gffcl	locus	77559126	77559419	.	-	.	ID=RLOC_00018655;geneIDs=comp144435_c0_seq1.path1;transcripts=comp144435_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77559126	77559419	.	-	.	ID=comp144435_c0_seq1.mrna1;geneID=comp144435_c0_seq1.path1;Name=comp144435_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=294;mismatches=0;indels=0;unknowns=0;Target=comp144435_c0_seq1 294 1 .;CDS_Target=comp144435_c0_seq1 53 3 .;locus=RLOC_00018655
Chr2	stalkie_big_nohaplotig	exon	77559126	77559419	100	-	.	Parent=comp144435_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77559367	77559417	.	-	0	Parent=comp144435_c0_seq1.mrna1
Chr2	gffcl	locus	77622691	77624892	.	+	.	ID=RLOC_00018657;geneIDs=FBgn0038195.1.path1;transcripts=FBgn0038195.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77622691	77624892	.	+	.	ID=FBgn0038195.1.mrna1;geneID=FBgn0038195.1.path1;Name=FBgn0038195.1;Dir=sensecoverage=100.0;identity=100.0;matches=1104;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018657
Chr2	stalkie_big_nohaplotig	exon	77622691	77622832	100	+	.	Parent=FBgn0038195.1.mrna1;Target=FBgn0038195.1 1 142 +
Chr2	stalkie_big_nohaplotig	exon	77622893	77623058	100	+	.	Parent=FBgn0038195.1.mrna1;Target=FBgn0038195.1 143 308 +
Chr2	stalkie_big_nohaplotig	exon	77623112	77623514	100	+	.	Parent=FBgn0038195.1.mrna1;Target=FBgn0038195.1 309 711 +
Chr2	stalkie_big_nohaplotig	exon	77624371	77624489	100	+	.	Parent=FBgn0038195.1.mrna1;Target=FBgn0038195.1 712 830 +
Chr2	stalkie_big_nohaplotig	exon	77624550	77624713	100	+	.	Parent=FBgn0038195.1.mrna1;Target=FBgn0038195.1 831 994 +
Chr2	stalkie_big_nohaplotig	exon	77624783	77624892	100	+	.	Parent=FBgn0038195.1.mrna1;Target=FBgn0038195.1 995 1104 +
Chr2	stalkie_big_nohaplotig	CDS	77622691	77622832	.	+	0	Parent=FBgn0038195.1.mrna1;Target=FBgn0038195.1 1 142 +
Chr2	stalkie_big_nohaplotig	CDS	77622893	77623058	.	+	2	Parent=FBgn0038195.1.mrna1;Target=FBgn0038195.1 143 308 +
Chr2	stalkie_big_nohaplotig	CDS	77623112	77623514	.	+	1	Parent=FBgn0038195.1.mrna1;Target=FBgn0038195.1 309 711 +
Chr2	stalkie_big_nohaplotig	CDS	77624371	77624489	.	+	0	Parent=FBgn0038195.1.mrna1;Target=FBgn0038195.1 712 830 +
Chr2	stalkie_big_nohaplotig	CDS	77624550	77624713	.	+	1	Parent=FBgn0038195.1.mrna1;Target=FBgn0038195.1 831 994 +
Chr2	stalkie_big_nohaplotig	CDS	77624783	77624892	.	+	2	Parent=FBgn0038195.1.mrna1;Target=FBgn0038195.1 995 1104 +
Chr2	gffcl	locus	77625866	77626357	.	-	.	ID=RLOC_00018658;geneIDs=FBgn0038196.1.path2;transcripts=FBgn0038196.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	77625866	77626357	.	-	.	ID=FBgn0038196.1.mrna2;geneID=FBgn0038196.1.path2;Name=FBgn0038196.1;Dir=sensecoverage=100.0;identity=99.7;matches=362;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018658
Chr2	stalkie_big_nohaplotig	exon	77625866	77625961	100	-	.	Parent=FBgn0038196.1.mrna2;Target=FBgn0038196.1 268 363 +
Chr2	stalkie_big_nohaplotig	exon	77626020	77626127	100	-	.	Parent=FBgn0038196.1.mrna2;Target=FBgn0038196.1 160 267 +
Chr2	stalkie_big_nohaplotig	exon	77626199	77626357	99	-	.	Parent=FBgn0038196.1.mrna2;Target=FBgn0038196.1 1 159 +
Chr2	stalkie_big_nohaplotig	CDS	77625866	77625961	.	-	0	Parent=FBgn0038196.1.mrna2;Target=FBgn0038196.1 268 363 +
Chr2	stalkie_big_nohaplotig	CDS	77626020	77626127	.	-	0	Parent=FBgn0038196.1.mrna2;Target=FBgn0038196.1 160 267 +
Chr2	stalkie_big_nohaplotig	CDS	77626199	77626357	.	-	0	Parent=FBgn0038196.1.mrna2;Target=FBgn0038196.1 1 159 +
Chr2	gffcl	locus	77642952	77647550	.	-	.	ID=RLOC_00018659;geneIDs=FBgn0039379.1.path1;transcripts=FBgn0039379.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77642952	77647550	.	-	.	ID=FBgn0039379.1.mrna1;geneID=FBgn0039379.1.path1;Name=FBgn0039379.1;Dir=sensecoverage=100.0;identity=100.0;matches=1662;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018659
Chr2	stalkie_big_nohaplotig	exon	77642952	77643800	100	-	.	Parent=FBgn0039379.1.mrna1;Target=FBgn0039379.1 814 1662 +
Chr2	stalkie_big_nohaplotig	exon	77643863	77644043	100	-	.	Parent=FBgn0039379.1.mrna1;Target=FBgn0039379.1 633 813 +
Chr2	stalkie_big_nohaplotig	exon	77644668	77644814	100	-	.	Parent=FBgn0039379.1.mrna1;Target=FBgn0039379.1 486 632 +
Chr2	stalkie_big_nohaplotig	exon	77646933	77647142	100	-	.	Parent=FBgn0039379.1.mrna1;Target=FBgn0039379.1 276 485 +
Chr2	stalkie_big_nohaplotig	exon	77647214	77647404	100	-	.	Parent=FBgn0039379.1.mrna1;Target=FBgn0039379.1 85 275 +
Chr2	stalkie_big_nohaplotig	exon	77647467	77647550	100	-	.	Parent=FBgn0039379.1.mrna1;Target=FBgn0039379.1 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	77642952	77643800	.	-	0	Parent=FBgn0039379.1.mrna1;Target=FBgn0039379.1 814 1662 +
Chr2	stalkie_big_nohaplotig	CDS	77643863	77644043	.	-	1	Parent=FBgn0039379.1.mrna1;Target=FBgn0039379.1 633 813 +
Chr2	stalkie_big_nohaplotig	CDS	77644668	77644814	.	-	1	Parent=FBgn0039379.1.mrna1;Target=FBgn0039379.1 486 632 +
Chr2	stalkie_big_nohaplotig	CDS	77646933	77647142	.	-	1	Parent=FBgn0039379.1.mrna1;Target=FBgn0039379.1 276 485 +
Chr2	stalkie_big_nohaplotig	CDS	77647214	77647404	.	-	0	Parent=FBgn0039379.1.mrna1;Target=FBgn0039379.1 85 275 +
Chr2	stalkie_big_nohaplotig	CDS	77647467	77647550	.	-	0	Parent=FBgn0039379.1.mrna1;Target=FBgn0039379.1 1 84 +
Chr2	gffcl	locus	77645744	77646088	.	+	.	ID=RLOC_00018660;geneIDs=comp145995_c0_seq1.path1;transcripts=comp145995_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77645744	77646088	.	+	.	ID=comp145995_c0_seq1.mrna1;geneID=comp145995_c0_seq1.path1;Name=comp145995_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.4;matches=329;mismatches=16;indels=0;unknowns=0;Target=comp145995_c0_seq1 345 1 .;CDS_Target=comp145995_c0_seq1 106 2 .;locus=RLOC_00018660
Chr2	stalkie_big_nohaplotig	exon	77645744	77646088	95	+	.	Parent=comp145995_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77645745	77645849	.	+	0	Parent=comp145995_c0_seq1.mrna1
Chr2	gffcl	locus	77648280	77648854	.	+	.	ID=RLOC_00018661;geneIDs=FBgn0026753.1.path1;transcripts=FBgn0026753.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77648280	77648854	.	+	.	ID=FBgn0026753.1.mrna1;geneID=FBgn0026753.1.path1;Name=FBgn0026753.1;Dir=sensecoverage=100.0;identity=100.0;matches=369;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018661
Chr2	stalkie_big_nohaplotig	exon	77648280	77648379	100	+	.	Parent=FBgn0026753.1.mrna1;Target=FBgn0026753.1 1 100 +
Chr2	stalkie_big_nohaplotig	exon	77648487	77648587	100	+	.	Parent=FBgn0026753.1.mrna1;Target=FBgn0026753.1 101 201 +
Chr2	stalkie_big_nohaplotig	exon	77648687	77648854	100	+	.	Parent=FBgn0026753.1.mrna1;Target=FBgn0026753.1 202 369 +
Chr2	stalkie_big_nohaplotig	CDS	77648280	77648379	.	+	0	Parent=FBgn0026753.1.mrna1;Target=FBgn0026753.1 1 100 +
Chr2	stalkie_big_nohaplotig	CDS	77648487	77648587	.	+	2	Parent=FBgn0026753.1.mrna1;Target=FBgn0026753.1 101 201 +
Chr2	stalkie_big_nohaplotig	CDS	77648687	77648854	.	+	0	Parent=FBgn0026753.1.mrna1;Target=FBgn0026753.1 202 369 +
Chr2	gffcl	locus	77649280	77650198	.	-	.	ID=RLOC_00018662;geneIDs=FBgn0038704.path1;transcripts=FBgn0038704.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77649280	77650198	.	-	.	ID=FBgn0038704.mrna1;geneID=FBgn0038704.path1;Name=FBgn0038704;Dir=sensecoverage=100.0;identity=100.0;matches=546;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018662
Chr2	stalkie_big_nohaplotig	exon	77649280	77649428	100	-	.	Parent=FBgn0038704.mrna1;Target=FBgn0038704 398 546 +
Chr2	stalkie_big_nohaplotig	exon	77649483	77649708	100	-	.	Parent=FBgn0038704.mrna1;Target=FBgn0038704 172 397 +
Chr2	stalkie_big_nohaplotig	exon	77650028	77650198	100	-	.	Parent=FBgn0038704.mrna1;Target=FBgn0038704 1 171 +
Chr2	stalkie_big_nohaplotig	CDS	77649280	77649428	.	-	2	Parent=FBgn0038704.mrna1;Target=FBgn0038704 398 546 +
Chr2	stalkie_big_nohaplotig	CDS	77649483	77649708	.	-	0	Parent=FBgn0038704.mrna1;Target=FBgn0038704 172 397 +
Chr2	stalkie_big_nohaplotig	CDS	77650028	77650198	.	-	0	Parent=FBgn0038704.mrna1;Target=FBgn0038704 1 171 +
Chr2	gffcl	locus	77676207	77676838	.	+	.	ID=RLOC_00018663;geneIDs=FBgn0037603.1.path1;transcripts=FBgn0037603.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77676207	77676838	.	+	.	ID=FBgn0037603.1.mrna1;geneID=FBgn0037603.1.path1;Name=FBgn0037603.1;Dir=sensecoverage=100.0;identity=100.0;matches=510;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018663
Chr2	stalkie_big_nohaplotig	exon	77676207	77676401	100	+	.	Parent=FBgn0037603.1.mrna1;Target=FBgn0037603.1 1 195 +
Chr2	stalkie_big_nohaplotig	exon	77676467	77676588	100	+	.	Parent=FBgn0037603.1.mrna1;Target=FBgn0037603.1 196 317 +
Chr2	stalkie_big_nohaplotig	exon	77676646	77676838	100	+	.	Parent=FBgn0037603.1.mrna1;Target=FBgn0037603.1 318 510 +
Chr2	stalkie_big_nohaplotig	CDS	77676207	77676401	.	+	0	Parent=FBgn0037603.1.mrna1;Target=FBgn0037603.1 1 195 +
Chr2	stalkie_big_nohaplotig	CDS	77676467	77676588	.	+	0	Parent=FBgn0037603.1.mrna1;Target=FBgn0037603.1 196 317 +
Chr2	stalkie_big_nohaplotig	CDS	77676646	77676838	.	+	1	Parent=FBgn0037603.1.mrna1;Target=FBgn0037603.1 318 510 +
Chr2	gffcl	locus	77678688	77684408	.	-	.	ID=RLOC_00018664;geneIDs=FBgn0263231.1.path1;transcripts=FBgn0263231.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77678688	77684408	.	-	.	ID=FBgn0263231.1.mrna1;geneID=FBgn0263231.1.path1;Name=FBgn0263231.1;Dir=sensecoverage=100.0;identity=98.9;matches=2244;mismatches=0;indels=24;unknowns=0;locus=RLOC_00018664
Chr2	stalkie_big_nohaplotig	exon	77678688	77678800	100	-	.	Parent=FBgn0263231.1.mrna1;Target=FBgn0263231.1 2156 2268 +
Chr2	stalkie_big_nohaplotig	exon	77678870	77680651	98	-	.	Parent=FBgn0263231.1.mrna1;Target=FBgn0263231.1 350 2155 +
Chr2	stalkie_big_nohaplotig	exon	77680716	77680892	100	-	.	Parent=FBgn0263231.1.mrna1;Target=FBgn0263231.1 173 349 +
Chr2	stalkie_big_nohaplotig	exon	77683003	77683117	100	-	.	Parent=FBgn0263231.1.mrna1;Target=FBgn0263231.1 58 172 +
Chr2	stalkie_big_nohaplotig	exon	77684352	77684408	100	-	.	Parent=FBgn0263231.1.mrna1;Target=FBgn0263231.1 1 57 +
Chr2	stalkie_big_nohaplotig	CDS	77678688	77678800	.	-	2	Parent=FBgn0263231.1.mrna1;Target=FBgn0263231.1 2156 2268 +
Chr2	stalkie_big_nohaplotig	CDS	77678870	77680651	.	-	2	Parent=FBgn0263231.1.mrna1;Target=FBgn0263231.1 350 2155 +
Chr2	stalkie_big_nohaplotig	CDS	77680716	77680892	.	-	2	Parent=FBgn0263231.1.mrna1;Target=FBgn0263231.1 173 349 +
Chr2	stalkie_big_nohaplotig	CDS	77683003	77683117	.	-	0	Parent=FBgn0263231.1.mrna1;Target=FBgn0263231.1 58 172 +
Chr2	stalkie_big_nohaplotig	CDS	77684352	77684408	.	-	0	Parent=FBgn0263231.1.mrna1;Target=FBgn0263231.1 1 57 +
Chr2	gffcl	locus	77689313	77690852	.	+	.	ID=RLOC_00018665;geneIDs=FBgn0038360.1.path1;transcripts=FBgn0038360.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77689313	77690852	.	+	.	ID=FBgn0038360.1.mrna1;geneID=FBgn0038360.1.path1;Name=FBgn0038360.1;Dir=sensecoverage=100.0;identity=99.9;matches=1423;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018665
Chr2	stalkie_big_nohaplotig	exon	77689313	77689990	99	+	.	Parent=FBgn0038360.1.mrna1;Target=FBgn0038360.1 1 678 +
Chr2	stalkie_big_nohaplotig	exon	77690051	77690418	100	+	.	Parent=FBgn0038360.1.mrna1;Target=FBgn0038360.1 679 1046 +
Chr2	stalkie_big_nohaplotig	exon	77690474	77690852	100	+	.	Parent=FBgn0038360.1.mrna1;Target=FBgn0038360.1 1047 1425 +
Chr2	stalkie_big_nohaplotig	CDS	77689313	77689990	.	+	0	Parent=FBgn0038360.1.mrna1;Target=FBgn0038360.1 1 678 +
Chr2	stalkie_big_nohaplotig	CDS	77690051	77690418	.	+	0	Parent=FBgn0038360.1.mrna1;Target=FBgn0038360.1 679 1046 +
Chr2	stalkie_big_nohaplotig	CDS	77690474	77690852	.	+	1	Parent=FBgn0038360.1.mrna1;Target=FBgn0038360.1 1047 1425 +
Chr2	gffcl	locus	77691899	77693938	.	-	.	ID=RLOC_00018666;geneIDs=FBgn0037657.1.path1;transcripts=FBgn0037657.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77691899	77693938	.	-	.	ID=FBgn0037657.1.mrna1;geneID=FBgn0037657.1.path1;Name=FBgn0037657.1;Dir=sensecoverage=100.0;identity=99.6;matches=1577;mismatches=7;indels=0;unknowns=0;locus=RLOC_00018666
Chr2	stalkie_big_nohaplotig	exon	77691899	77691932	100	-	.	Parent=FBgn0037657.1.mrna1;Target=FBgn0037657.1 1551 1584 +
Chr2	stalkie_big_nohaplotig	exon	77691995	77692136	100	-	.	Parent=FBgn0037657.1.mrna1;Target=FBgn0037657.1 1409 1550 +
Chr2	stalkie_big_nohaplotig	exon	77692203	77692365	100	-	.	Parent=FBgn0037657.1.mrna1;Target=FBgn0037657.1 1246 1408 +
Chr2	stalkie_big_nohaplotig	exon	77692438	77692655	99	-	.	Parent=FBgn0037657.1.mrna1;Target=FBgn0037657.1 1028 1245 +
Chr2	stalkie_big_nohaplotig	exon	77692711	77692818	98	-	.	Parent=FBgn0037657.1.mrna1;Target=FBgn0037657.1 920 1027 +
Chr2	stalkie_big_nohaplotig	exon	77692878	77693550	99	-	.	Parent=FBgn0037657.1.mrna1;Target=FBgn0037657.1 247 919 +
Chr2	stalkie_big_nohaplotig	exon	77693619	77693724	100	-	.	Parent=FBgn0037657.1.mrna1;Target=FBgn0037657.1 141 246 +
Chr2	stalkie_big_nohaplotig	exon	77693799	77693938	99	-	.	Parent=FBgn0037657.1.mrna1;Target=FBgn0037657.1 1 140 +
Chr2	stalkie_big_nohaplotig	CDS	77691899	77691932	.	-	1	Parent=FBgn0037657.1.mrna1;Target=FBgn0037657.1 1551 1584 +
Chr2	stalkie_big_nohaplotig	CDS	77691995	77692136	.	-	2	Parent=FBgn0037657.1.mrna1;Target=FBgn0037657.1 1409 1550 +
Chr2	stalkie_big_nohaplotig	CDS	77692203	77692365	.	-	0	Parent=FBgn0037657.1.mrna1;Target=FBgn0037657.1 1246 1408 +
Chr2	stalkie_big_nohaplotig	CDS	77692438	77692655	.	-	2	Parent=FBgn0037657.1.mrna1;Target=FBgn0037657.1 1028 1245 +
Chr2	stalkie_big_nohaplotig	CDS	77692711	77692818	.	-	2	Parent=FBgn0037657.1.mrna1;Target=FBgn0037657.1 920 1027 +
Chr2	stalkie_big_nohaplotig	CDS	77692878	77693550	.	-	0	Parent=FBgn0037657.1.mrna1;Target=FBgn0037657.1 247 919 +
Chr2	stalkie_big_nohaplotig	CDS	77693619	77693724	.	-	1	Parent=FBgn0037657.1.mrna1;Target=FBgn0037657.1 141 246 +
Chr2	stalkie_big_nohaplotig	CDS	77693799	77693938	.	-	0	Parent=FBgn0037657.1.mrna1;Target=FBgn0037657.1 1 140 +
Chr2	gffcl	locus	77696314	77734594	.	+	.	ID=RLOC_00018667;geneIDs=FBgn0002932.1.path1;transcripts=FBgn0002932.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77696314	77734594	.	+	.	ID=FBgn0002932.1.mrna1;geneID=FBgn0002932.1.path1;Name=FBgn0002932.1;Dir=sensecoverage=100.0;identity=100.0;matches=2039;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018667
Chr2	stalkie_big_nohaplotig	exon	77696314	77696359	100	+	.	Parent=FBgn0002932.1.mrna1;Target=FBgn0002932.1 1 46 +
Chr2	stalkie_big_nohaplotig	exon	77732537	77734293	99	+	.	Parent=FBgn0002932.1.mrna1;Target=FBgn0002932.1 47 1803 +
Chr2	stalkie_big_nohaplotig	exon	77734358	77734594	100	+	.	Parent=FBgn0002932.1.mrna1;Target=FBgn0002932.1 1804 2040 +
Chr2	stalkie_big_nohaplotig	CDS	77696314	77696359	.	+	0	Parent=FBgn0002932.1.mrna1;Target=FBgn0002932.1 1 46 +
Chr2	stalkie_big_nohaplotig	CDS	77732537	77734293	.	+	2	Parent=FBgn0002932.1.mrna1;Target=FBgn0002932.1 47 1803 +
Chr2	stalkie_big_nohaplotig	CDS	77734358	77734594	.	+	0	Parent=FBgn0002932.1.mrna1;Target=FBgn0002932.1 1804 2040 +
Chr2	gffcl	locus	77735621	77736710	.	+	.	ID=RLOC_00018668;geneIDs=comp138386_c1_seq1.path1;transcripts=comp138386_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77735621	77736710	.	+	.	ID=comp138386_c1_seq1.mrna1;geneID=comp138386_c1_seq1.path1;Name=comp138386_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1082;mismatches=6;indels=2;unknowns=0;Target=comp138386_c1_seq1 1088 1 .;CDS_Target=comp138386_c1_seq1 823 713 .;locus=RLOC_00018668
Chr2	stalkie_big_nohaplotig	exon	77735621	77736710	99	+	.	Parent=comp138386_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77736335	77736445	.	+	0	Parent=comp138386_c1_seq1.mrna1
Chr2	gffcl	locus	77741540	77742424	.	+	.	ID=RLOC_00018669;geneIDs=FBgn0038857.1.path1;transcripts=FBgn0038857.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77741540	77742424	.	+	.	ID=FBgn0038857.1.mrna1;geneID=FBgn0038857.1.path1;Name=FBgn0038857.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=881;mismatches=4;indels=0;unknowns=0;Target=FBgn0038857.1 885 1 .;locus=RLOC_00018669
Chr2	stalkie_big_nohaplotig	exon	77741540	77742424	99	+	.	Parent=FBgn0038857.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77741540	77742424	.	+	0	Parent=FBgn0038857.1.mrna1
Chr2	gffcl	locus	77742533	77744061	.	-	.	ID=RLOC_00018670;geneIDs=FBgn0010770.1.path1;transcripts=FBgn0010770.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77742533	77744061	.	-	.	ID=FBgn0010770.1.mrna1;geneID=FBgn0010770.1.path1;Name=FBgn0010770.1;Dir=sensecoverage=100.0;identity=99.0;matches=1251;mismatches=10;indels=2;unknowns=0;locus=RLOC_00018670
Chr2	stalkie_big_nohaplotig	exon	77742533	77742633	100	-	.	Parent=FBgn0010770.1.mrna1;Target=FBgn0010770.1 1163 1263 +
Chr2	stalkie_big_nohaplotig	exon	77742690	77743111	99	-	.	Parent=FBgn0010770.1.mrna1;Target=FBgn0010770.1 741 1162 +
Chr2	stalkie_big_nohaplotig	exon	77743170	77743354	99	-	.	Parent=FBgn0010770.1.mrna1;Target=FBgn0010770.1 556 740 +
Chr2	stalkie_big_nohaplotig	exon	77743415	77743594	97	-	.	Parent=FBgn0010770.1.mrna1;Target=FBgn0010770.1 376 555 +
Chr2	stalkie_big_nohaplotig	exon	77743689	77744061	99	-	.	Parent=FBgn0010770.1.mrna1;Target=FBgn0010770.1 1 375 +
Chr2	stalkie_big_nohaplotig	CDS	77742533	77742633	.	-	2	Parent=FBgn0010770.1.mrna1;Target=FBgn0010770.1 1163 1263 +
Chr2	stalkie_big_nohaplotig	CDS	77742690	77743111	.	-	1	Parent=FBgn0010770.1.mrna1;Target=FBgn0010770.1 741 1162 +
Chr2	stalkie_big_nohaplotig	CDS	77743170	77743354	.	-	0	Parent=FBgn0010770.1.mrna1;Target=FBgn0010770.1 556 740 +
Chr2	stalkie_big_nohaplotig	CDS	77743415	77743594	.	-	0	Parent=FBgn0010770.1.mrna1;Target=FBgn0010770.1 376 555 +
Chr2	stalkie_big_nohaplotig	CDS	77743689	77744018	.	-	0	Parent=FBgn0010770.1.mrna1;Target=FBgn0010770.1 46 375 +
Chr2	gffcl	locus	77747972	77753474	.	-	.	ID=RLOC_00018671;geneIDs=FBgn0015790.1.path1;transcripts=FBgn0015790.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77747972	77753474	.	-	.	ID=FBgn0015790.1.mrna1;geneID=FBgn0015790.1.path1;Name=FBgn0015790.1;Dir=sensecoverage=100.0;identity=99.7;matches=673;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018671
Chr2	stalkie_big_nohaplotig	exon	77747972	77748099	100	-	.	Parent=FBgn0015790.1.mrna1;Target=FBgn0015790.1 548 675 +
Chr2	stalkie_big_nohaplotig	exon	77748173	77748521	99	-	.	Parent=FBgn0015790.1.mrna1;Target=FBgn0015790.1 199 547 +
Chr2	stalkie_big_nohaplotig	exon	77748908	77749029	100	-	.	Parent=FBgn0015790.1.mrna1;Target=FBgn0015790.1 77 198 +
Chr2	stalkie_big_nohaplotig	exon	77753399	77753474	100	-	.	Parent=FBgn0015790.1.mrna1;Target=FBgn0015790.1 1 76 +
Chr2	stalkie_big_nohaplotig	CDS	77747972	77748099	.	-	2	Parent=FBgn0015790.1.mrna1;Target=FBgn0015790.1 548 675 +
Chr2	stalkie_big_nohaplotig	CDS	77748173	77748521	.	-	0	Parent=FBgn0015790.1.mrna1;Target=FBgn0015790.1 199 547 +
Chr2	stalkie_big_nohaplotig	CDS	77748908	77749029	.	-	2	Parent=FBgn0015790.1.mrna1;Target=FBgn0015790.1 77 198 +
Chr2	stalkie_big_nohaplotig	CDS	77753399	77753474	.	-	0	Parent=FBgn0015790.1.mrna1;Target=FBgn0015790.1 1 76 +
Chr2	gffcl	locus	77753557	77882650	.	-	.	ID=RLOC_00018672;geneIDs=comp135852_c0_seq1.path1;transcripts=comp135852_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77753557	77882650	.	-	.	ID=comp135852_c0_seq1.mrna1;geneID=comp135852_c0_seq1.path1;Name=comp135852_c0_seq1;Dir=indeterminatecoverage=87.9;identity=98.7;matches=315;mismatches=4;indels=0;unknowns=0;locus=RLOC_00018672
Chr2	stalkie_big_nohaplotig	exon	77753557	77753768	99	-	.	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 363 152 .
Chr2	stalkie_big_nohaplotig	exon	77770351	77770360	80	-	.	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 151 142 .
Chr2	stalkie_big_nohaplotig	exon	77771197	77771198	100	-	.	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 141 140 .
Chr2	stalkie_big_nohaplotig	exon	77777474	77777480	100	-	.	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 139 133 .
Chr2	stalkie_big_nohaplotig	exon	77806756	77806763	100	-	.	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 132 125 .
Chr2	stalkie_big_nohaplotig	exon	77809273	77809276	100	-	.	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 124 121 .
Chr2	stalkie_big_nohaplotig	exon	77816938	77816944	100	-	.	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 120 114 .
Chr2	stalkie_big_nohaplotig	exon	77824441	77824448	100	-	.	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 113 106 .
Chr2	stalkie_big_nohaplotig	exon	77847672	77847676	80	-	.	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 105 101 .
Chr2	stalkie_big_nohaplotig	exon	77852954	77852957	100	-	.	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 100 97 .
Chr2	stalkie_big_nohaplotig	exon	77856755	77856759	100	-	.	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 96 92 .
Chr2	stalkie_big_nohaplotig	exon	77859801	77859804	100	-	.	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 91 88 .
Chr2	stalkie_big_nohaplotig	exon	77865982	77865988	100	-	.	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 87 81 .
Chr2	stalkie_big_nohaplotig	exon	77869791	77869799	100	-	.	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 80 72 .
Chr2	stalkie_big_nohaplotig	exon	77877163	77877169	100	-	.	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 71 65 .
Chr2	stalkie_big_nohaplotig	exon	77879041	77879045	100	-	.	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 64 60 .
Chr2	stalkie_big_nohaplotig	exon	77879449	77879456	100	-	.	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 59 52 .
Chr2	stalkie_big_nohaplotig	exon	77882644	77882650	100	-	.	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 51 45 .
Chr2	stalkie_big_nohaplotig	CDS	77806760	77806763	.	-	1	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 128 125 .
Chr2	stalkie_big_nohaplotig	CDS	77809273	77809276	.	-	2	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 124 121 .
Chr2	stalkie_big_nohaplotig	CDS	77816938	77816944	.	-	0	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 120 114 .
Chr2	stalkie_big_nohaplotig	CDS	77824441	77824448	.	-	2	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 113 106 .
Chr2	stalkie_big_nohaplotig	CDS	77847672	77847676	.	-	1	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 105 101 .
Chr2	stalkie_big_nohaplotig	CDS	77852954	77852957	.	-	2	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 100 97 .
Chr2	stalkie_big_nohaplotig	CDS	77856755	77856759	.	-	1	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 96 92 .
Chr2	stalkie_big_nohaplotig	CDS	77859801	77859804	.	-	2	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 91 88 .
Chr2	stalkie_big_nohaplotig	CDS	77865982	77865988	.	-	0	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 87 81 .
Chr2	stalkie_big_nohaplotig	CDS	77869791	77869799	.	-	0	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 80 72 .
Chr2	stalkie_big_nohaplotig	CDS	77877163	77877169	.	-	1	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 71 65 .
Chr2	stalkie_big_nohaplotig	CDS	77879041	77879045	.	-	0	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 64 60 .
Chr2	stalkie_big_nohaplotig	CDS	77879449	77879456	.	-	2	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 59 52 .
Chr2	stalkie_big_nohaplotig	CDS	77882644	77882650	.	-	0	Parent=comp135852_c0_seq1.mrna1;Target=comp135852_c0_seq1 51 45 .
Chr2	gffcl	locus	77757858	77760114	.	-	.	ID=RLOC_00018673;geneIDs=FBgn0028468.1.path1;transcripts=FBgn0028468.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77757858	77760114	.	-	.	ID=FBgn0028468.1.mrna1;geneID=FBgn0028468.1.path1;Name=FBgn0028468.1;Dir=sensecoverage=100.0;identity=100.0;matches=1404;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018673
Chr2	stalkie_big_nohaplotig	exon	77757858	77757946	100	-	.	Parent=FBgn0028468.1.mrna1;Target=FBgn0028468.1 1316 1404 +
Chr2	stalkie_big_nohaplotig	exon	77758000	77758137	100	-	.	Parent=FBgn0028468.1.mrna1;Target=FBgn0028468.1 1178 1315 +
Chr2	stalkie_big_nohaplotig	exon	77758217	77758384	100	-	.	Parent=FBgn0028468.1.mrna1;Target=FBgn0028468.1 1010 1177 +
Chr2	stalkie_big_nohaplotig	exon	77758470	77758645	100	-	.	Parent=FBgn0028468.1.mrna1;Target=FBgn0028468.1 834 1009 +
Chr2	stalkie_big_nohaplotig	exon	77759136	77759209	100	-	.	Parent=FBgn0028468.1.mrna1;Target=FBgn0028468.1 760 833 +
Chr2	stalkie_big_nohaplotig	exon	77759293	77759634	100	-	.	Parent=FBgn0028468.1.mrna1;Target=FBgn0028468.1 418 759 +
Chr2	stalkie_big_nohaplotig	exon	77759698	77760114	100	-	.	Parent=FBgn0028468.1.mrna1;Target=FBgn0028468.1 1 417 +
Chr2	stalkie_big_nohaplotig	CDS	77757858	77757946	.	-	2	Parent=FBgn0028468.1.mrna1;Target=FBgn0028468.1 1316 1404 +
Chr2	stalkie_big_nohaplotig	CDS	77758000	77758137	.	-	2	Parent=FBgn0028468.1.mrna1;Target=FBgn0028468.1 1178 1315 +
Chr2	stalkie_big_nohaplotig	CDS	77758217	77758384	.	-	2	Parent=FBgn0028468.1.mrna1;Target=FBgn0028468.1 1010 1177 +
Chr2	stalkie_big_nohaplotig	CDS	77758470	77758645	.	-	1	Parent=FBgn0028468.1.mrna1;Target=FBgn0028468.1 834 1009 +
Chr2	stalkie_big_nohaplotig	CDS	77759136	77759209	.	-	0	Parent=FBgn0028468.1.mrna1;Target=FBgn0028468.1 760 833 +
Chr2	stalkie_big_nohaplotig	CDS	77759293	77759634	.	-	0	Parent=FBgn0028468.1.mrna1;Target=FBgn0028468.1 418 759 +
Chr2	stalkie_big_nohaplotig	CDS	77759698	77760114	.	-	0	Parent=FBgn0028468.1.mrna1;Target=FBgn0028468.1 1 417 +
Chr2	gffcl	locus	77760497	77763286	.	+	.	ID=RLOC_00018674;geneIDs=FBgn0038856.1.path1;transcripts=FBgn0038856.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77760497	77763286	.	+	.	ID=FBgn0038856.1.mrna1;geneID=FBgn0038856.1.path1;Name=FBgn0038856.1;Dir=sensecoverage=100.0;identity=100.0;matches=2295;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018674
Chr2	stalkie_big_nohaplotig	exon	77760497	77760599	100	+	.	Parent=FBgn0038856.1.mrna1;Target=FBgn0038856.1 1 103 +
Chr2	stalkie_big_nohaplotig	exon	77760657	77761741	100	+	.	Parent=FBgn0038856.1.mrna1;Target=FBgn0038856.1 104 1188 +
Chr2	stalkie_big_nohaplotig	exon	77762180	77763286	100	+	.	Parent=FBgn0038856.1.mrna1;Target=FBgn0038856.1 1189 2295 +
Chr2	stalkie_big_nohaplotig	CDS	77760497	77760599	.	+	0	Parent=FBgn0038856.1.mrna1;Target=FBgn0038856.1 1 103 +
Chr2	stalkie_big_nohaplotig	CDS	77760657	77761741	.	+	2	Parent=FBgn0038856.1.mrna1;Target=FBgn0038856.1 104 1188 +
Chr2	stalkie_big_nohaplotig	CDS	77762180	77763286	.	+	0	Parent=FBgn0038856.1.mrna1;Target=FBgn0038856.1 1189 2295 +
Chr2	gffcl	locus	77763742	77765754	.	-	.	ID=RLOC_00018675;geneIDs=FBgn0038855.1.path1;transcripts=FBgn0038855.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77763742	77765754	.	-	.	ID=FBgn0038855.1.mrna1;geneID=FBgn0038855.1.path1;Name=FBgn0038855.1;Dir=sensecoverage=100.0;identity=99.9;matches=1561;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018675
Chr2	stalkie_big_nohaplotig	exon	77763742	77763873	100	-	.	Parent=FBgn0038855.1.mrna1;Target=FBgn0038855.1 1432 1563 +
Chr2	stalkie_big_nohaplotig	exon	77763941	77764164	100	-	.	Parent=FBgn0038855.1.mrna1;Target=FBgn0038855.1 1208 1431 +
Chr2	stalkie_big_nohaplotig	exon	77764231	77764413	100	-	.	Parent=FBgn0038855.1.mrna1;Target=FBgn0038855.1 1025 1207 +
Chr2	stalkie_big_nohaplotig	exon	77764468	77764654	100	-	.	Parent=FBgn0038855.1.mrna1;Target=FBgn0038855.1 838 1024 +
Chr2	stalkie_big_nohaplotig	exon	77764730	77764891	99	-	.	Parent=FBgn0038855.1.mrna1;Target=FBgn0038855.1 676 837 +
Chr2	stalkie_big_nohaplotig	exon	77764952	77765129	100	-	.	Parent=FBgn0038855.1.mrna1;Target=FBgn0038855.1 498 675 +
Chr2	stalkie_big_nohaplotig	exon	77765187	77765367	99	-	.	Parent=FBgn0038855.1.mrna1;Target=FBgn0038855.1 317 497 +
Chr2	stalkie_big_nohaplotig	exon	77765439	77765754	100	-	.	Parent=FBgn0038855.1.mrna1;Target=FBgn0038855.1 1 316 +
Chr2	stalkie_big_nohaplotig	CDS	77763742	77763873	.	-	0	Parent=FBgn0038855.1.mrna1;Target=FBgn0038855.1 1432 1563 +
Chr2	stalkie_big_nohaplotig	CDS	77763941	77764164	.	-	2	Parent=FBgn0038855.1.mrna1;Target=FBgn0038855.1 1208 1431 +
Chr2	stalkie_big_nohaplotig	CDS	77764231	77764413	.	-	2	Parent=FBgn0038855.1.mrna1;Target=FBgn0038855.1 1025 1207 +
Chr2	stalkie_big_nohaplotig	CDS	77764468	77764654	.	-	0	Parent=FBgn0038855.1.mrna1;Target=FBgn0038855.1 838 1024 +
Chr2	stalkie_big_nohaplotig	CDS	77764730	77764891	.	-	0	Parent=FBgn0038855.1.mrna1;Target=FBgn0038855.1 676 837 +
Chr2	stalkie_big_nohaplotig	CDS	77764952	77765129	.	-	1	Parent=FBgn0038855.1.mrna1;Target=FBgn0038855.1 498 675 +
Chr2	stalkie_big_nohaplotig	CDS	77765187	77765367	.	-	2	Parent=FBgn0038855.1.mrna1;Target=FBgn0038855.1 317 497 +
Chr2	stalkie_big_nohaplotig	CDS	77765439	77765754	.	-	0	Parent=FBgn0038855.1.mrna1;Target=FBgn0038855.1 1 316 +
Chr2	gffcl	locus	77785099	77788813	.	+	.	ID=RLOC_00018677;geneIDs=FBgn0038853.1.path1;transcripts=FBgn0038853.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77785099	77788813	.	+	.	ID=FBgn0038853.1.mrna1;geneID=FBgn0038853.1.path1;Name=FBgn0038853.1;Dir=sensecoverage=100.0;identity=100.0;matches=2870;mismatches=0;indels=1;unknowns=0;Target=FBgn0038853.1 3 272 +;locus=RLOC_00018677
Chr2	stalkie_big_nohaplotig	exon	77785099	77785400	99	+	.	Parent=FBgn0038853.1.mrna1;Target=FBgn0038853.1 1 303 +
Chr2	stalkie_big_nohaplotig	exon	77785460	77785867	100	+	.	Parent=FBgn0038853.1.mrna1;Target=FBgn0038853.1 304 711 +
Chr2	stalkie_big_nohaplotig	exon	77785923	77786090	100	+	.	Parent=FBgn0038853.1.mrna1;Target=FBgn0038853.1 712 879 +
Chr2	stalkie_big_nohaplotig	exon	77786312	77786610	100	+	.	Parent=FBgn0038853.1.mrna1;Target=FBgn0038853.1 880 1178 +
Chr2	stalkie_big_nohaplotig	exon	77786674	77787217	100	+	.	Parent=FBgn0038853.1.mrna1;Target=FBgn0038853.1 1179 1722 +
Chr2	stalkie_big_nohaplotig	exon	77787281	77787486	100	+	.	Parent=FBgn0038853.1.mrna1;Target=FBgn0038853.1 1723 1928 +
Chr2	stalkie_big_nohaplotig	exon	77787548	77787691	100	+	.	Parent=FBgn0038853.1.mrna1;Target=FBgn0038853.1 1929 2072 +
Chr2	stalkie_big_nohaplotig	exon	77787749	77787929	100	+	.	Parent=FBgn0038853.1.mrna1;Target=FBgn0038853.1 2073 2253 +
Chr2	stalkie_big_nohaplotig	exon	77788001	77788117	100	+	.	Parent=FBgn0038853.1.mrna1;Target=FBgn0038853.1 2254 2370 +
Chr2	stalkie_big_nohaplotig	exon	77788179	77788302	100	+	.	Parent=FBgn0038853.1.mrna1;Target=FBgn0038853.1 2371 2494 +
Chr2	stalkie_big_nohaplotig	exon	77788368	77788522	100	+	.	Parent=FBgn0038853.1.mrna1;Target=FBgn0038853.1 2495 2649 +
Chr2	stalkie_big_nohaplotig	exon	77788592	77788813	100	+	.	Parent=FBgn0038853.1.mrna1;Target=FBgn0038853.1 2650 2871 +
Chr2	stalkie_big_nohaplotig	CDS	77785101	77785369	.	+	0	Parent=FBgn0038853.1.mrna1
Chr2	gffcl	locus	77790220	77805766	.	-	.	ID=RLOC_00018678;geneIDs=FBgn0038852.1.path1;transcripts=FBgn0038852.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77790220	77805766	.	-	.	ID=FBgn0038852.1.mrna1;geneID=FBgn0038852.1.path1;Name=FBgn0038852.1;Dir=sensecoverage=98.7;identity=99.9;matches=973;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018678
Chr2	stalkie_big_nohaplotig	exon	77790220	77790658	99	-	.	Parent=FBgn0038852.1.mrna1;Target=FBgn0038852.1 536 974 +
Chr2	stalkie_big_nohaplotig	exon	77805232	77805766	100	-	.	Parent=FBgn0038852.1.mrna1;Target=FBgn0038852.1 1 535 +
Chr2	stalkie_big_nohaplotig	CDS	77790222	77790658	.	-	2	Parent=FBgn0038852.1.mrna1;Target=FBgn0038852.1 536 972 +
Chr2	stalkie_big_nohaplotig	CDS	77805232	77805766	.	-	0	Parent=FBgn0038852.1.mrna1;Target=FBgn0038852.1 1 535 +
Chr2	gffcl	locus	77828674	77828751	.	+	.	ID=RLOC_00018679;geneIDs=comp1070057_c0_seq1.path2;transcripts=comp1070057_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	77828674	77828751	.	+	.	ID=comp1070057_c0_seq1.mrna2;geneID=comp1070057_c0_seq1.path2;Name=comp1070057_c0_seq1;Dir=indeterminatecoverage=33.2;identity=100.0;matches=78;mismatches=0;indels=0;unknowns=0;Target=comp1070057_c0_seq1 235 158 .;locus=RLOC_00018679
Chr2	stalkie_big_nohaplotig	exon	77828674	77828751	100	+	.	Parent=comp1070057_c0_seq1.mrna2
Chr2	gffcl	locus	77832862	77854513	.	+	.	ID=RLOC_00018680;geneIDs=FBgn0017581.1.path1;transcripts=FBgn0017581.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77832862	77854513	.	+	.	ID=FBgn0017581.1.mrna1;geneID=FBgn0017581.1.path1;Name=FBgn0017581.1;Dir=sensecoverage=100.0;identity=99.9;matches=3476;mismatches=4;indels=0;unknowns=0;locus=RLOC_00018680
Chr2	stalkie_big_nohaplotig	exon	77832862	77832970	100	+	.	Parent=FBgn0017581.1.mrna1;Target=FBgn0017581.1 1 109 +
Chr2	stalkie_big_nohaplotig	exon	77850465	77850647	98	+	.	Parent=FBgn0017581.1.mrna1;Target=FBgn0017581.1 110 292 +
Chr2	stalkie_big_nohaplotig	exon	77851107	77851348	100	+	.	Parent=FBgn0017581.1.mrna1;Target=FBgn0017581.1 293 534 +
Chr2	stalkie_big_nohaplotig	exon	77851415	77851907	99	+	.	Parent=FBgn0017581.1.mrna1;Target=FBgn0017581.1 535 1027 +
Chr2	stalkie_big_nohaplotig	exon	77852005	77852218	100	+	.	Parent=FBgn0017581.1.mrna1;Target=FBgn0017581.1 1028 1241 +
Chr2	stalkie_big_nohaplotig	exon	77852275	77854513	99	+	.	Parent=FBgn0017581.1.mrna1;Target=FBgn0017581.1 1242 3480 +
Chr2	stalkie_big_nohaplotig	CDS	77832862	77832970	.	+	0	Parent=FBgn0017581.1.mrna1;Target=FBgn0017581.1 1 109 +
Chr2	stalkie_big_nohaplotig	CDS	77850465	77850647	.	+	2	Parent=FBgn0017581.1.mrna1;Target=FBgn0017581.1 110 292 +
Chr2	stalkie_big_nohaplotig	CDS	77851107	77851348	.	+	2	Parent=FBgn0017581.1.mrna1;Target=FBgn0017581.1 293 534 +
Chr2	stalkie_big_nohaplotig	CDS	77851415	77851907	.	+	0	Parent=FBgn0017581.1.mrna1;Target=FBgn0017581.1 535 1027 +
Chr2	stalkie_big_nohaplotig	CDS	77852005	77852218	.	+	2	Parent=FBgn0017581.1.mrna1;Target=FBgn0017581.1 1028 1241 +
Chr2	stalkie_big_nohaplotig	CDS	77852275	77854513	.	+	1	Parent=FBgn0017581.1.mrna1;Target=FBgn0017581.1 1242 3480 +
Chr2	gffcl	locus	77834835	77835419	.	-	.	ID=RLOC_00018681;geneIDs=comp135752_c0_seq1.path1;transcripts=comp135752_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77834835	77835419	.	-	.	ID=comp135752_c0_seq1.mrna1;geneID=comp135752_c0_seq1.path1;Name=comp135752_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.1;matches=580;mismatches=4;indels=1;unknowns=0;Target=comp135752_c0_seq1 584 1 .;CDS_Target=comp135752_c0_seq1 363 259 .;locus=RLOC_00018681
Chr2	stalkie_big_nohaplotig	exon	77834835	77835419	99	-	.	Parent=comp135752_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77835056	77835161	.	-	0	Parent=comp135752_c0_seq1.mrna1
Chr2	gffcl	locus	77836714	77837588	.	+	.	ID=RLOC_00018682;geneIDs=comp113422_c1_seq1.path1;transcripts=comp113422_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77836714	77837588	.	+	.	ID=comp113422_c1_seq1.mrna1;geneID=comp113422_c1_seq1.path1;Name=comp113422_c1_seq1;Dir=sensecoverage=99.7;identity=99.5;matches=363;mismatches=1;indels=1;unknowns=0;Target=comp113422_c1_seq1 85 153 +;locus=RLOC_00018682
Chr2	stalkie_big_nohaplotig	exon	77836714	77836736	100	+	.	Parent=comp113422_c1_seq1.mrna1;Target=comp113422_c1_seq1 1 23 +
Chr2	stalkie_big_nohaplotig	exon	77837248	77837588	99	+	.	Parent=comp113422_c1_seq1.mrna1;Target=comp113422_c1_seq1 24 365 +
Chr2	stalkie_big_nohaplotig	CDS	77837309	77837377	.	+	0	Parent=comp113422_c1_seq1.mrna1
Chr2	gffcl	locus	77841829	77845176	.	.	.	ID=RLOC_00018683;geneIDs=CPIJ017423.1.path4,comp163228_c0_seq1.path4;transcripts=CPIJ017423.1.mrna4,comp163228_c0_seq1.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	77841829	77844779	.	-	.	ID=CPIJ017423.1.mrna4;geneID=CPIJ017423.1.path4;Name=CPIJ017423.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=2939;mismatches=12;indels=1;unknowns=0;Target=CPIJ017423.1 2952 1 .;CDS_Target=CPIJ017423.1 56 3 .;locus=RLOC_00018683
Chr2	stalkie_big_nohaplotig	exon	77841829	77844779	99	-	.	Parent=CPIJ017423.1.mrna4
Chr2	stalkie_big_nohaplotig	CDS	77844725	77844777	.	-	0	Parent=CPIJ017423.1.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	77841843	77845176	.	+	.	ID=comp163228_c0_seq1.mrna4;geneID=comp163228_c0_seq1.path4;Name=comp163228_c0_seq1;Dir=indeterminatecoverage=94.5;identity=99.4;matches=3311;mismatches=16;indels=3;unknowns=0;Target=comp163228_c0_seq1 496 197 .;locus=RLOC_00018683
Chr2	stalkie_big_nohaplotig	exon	77841843	77842475	99	+	.	Parent=comp163228_c0_seq1.mrna4;Target=comp163228_c0_seq1 825 195 .
Chr2	stalkie_big_nohaplotig	exon	77842481	77845176	99	+	.	Parent=comp163228_c0_seq1.mrna4;Target=comp163228_c0_seq1 3544 848 .
Chr2	stalkie_big_nohaplotig	CDS	77841845	77842144	.	+	0	Parent=comp163228_c0_seq1.mrna4
Chr2	gffcl	locus	77856888	77857845	.	-	.	ID=RLOC_00018684;geneIDs=comp161929_c0_seq1.path1;transcripts=comp161929_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77856888	77857845	.	-	.	ID=comp161929_c0_seq1.mrna1;geneID=comp161929_c0_seq1.path1;Name=comp161929_c0_seq1;Dir=indeterminatecoverage=36.3;identity=99.7;matches=955;mismatches=1;indels=2;unknowns=0;Target=comp161929_c0_seq1 956 1 .;CDS_Target=comp161929_c0_seq1 340 167 .;locus=RLOC_00018684
Chr2	stalkie_big_nohaplotig	exon	77856888	77857845	99	-	.	Parent=comp161929_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77857504	77857677	.	-	0	Parent=comp161929_c0_seq1.mrna1
Chr2	gffcl	locus	77882101	77885009	.	+	.	ID=RLOC_00018686;geneIDs=FBgn0259139.1.path1;transcripts=FBgn0259139.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77882101	77885009	.	+	.	ID=FBgn0259139.1.mrna1;geneID=FBgn0259139.1.path1;Name=FBgn0259139.1;Dir=sensecoverage=86.2;identity=99.8;matches=1404;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018686
Chr2	stalkie_big_nohaplotig	exon	77882101	77882353	100	+	.	Parent=FBgn0259139.1.mrna1;Target=FBgn0259139.1 226 478 +
Chr2	stalkie_big_nohaplotig	exon	77882413	77882544	99	+	.	Parent=FBgn0259139.1.mrna1;Target=FBgn0259139.1 479 610 +
Chr2	stalkie_big_nohaplotig	exon	77882975	77883119	100	+	.	Parent=FBgn0259139.1.mrna1;Target=FBgn0259139.1 611 755 +
Chr2	stalkie_big_nohaplotig	exon	77883546	77883688	100	+	.	Parent=FBgn0259139.1.mrna1;Target=FBgn0259139.1 756 898 +
Chr2	stalkie_big_nohaplotig	exon	77883762	77884291	99	+	.	Parent=FBgn0259139.1.mrna1;Target=FBgn0259139.1 899 1428 +
Chr2	stalkie_big_nohaplotig	exon	77884806	77885009	99	+	.	Parent=FBgn0259139.1.mrna1;Target=FBgn0259139.1 1429 1632 +
Chr2	stalkie_big_nohaplotig	CDS	77882101	77882353	.	+	0	Parent=FBgn0259139.1.mrna1;Target=FBgn0259139.1 226 478 +
Chr2	stalkie_big_nohaplotig	CDS	77882413	77882544	.	+	2	Parent=FBgn0259139.1.mrna1;Target=FBgn0259139.1 479 610 +
Chr2	stalkie_big_nohaplotig	CDS	77882975	77883119	.	+	2	Parent=FBgn0259139.1.mrna1;Target=FBgn0259139.1 611 755 +
Chr2	stalkie_big_nohaplotig	CDS	77883546	77883688	.	+	1	Parent=FBgn0259139.1.mrna1;Target=FBgn0259139.1 756 898 +
Chr2	stalkie_big_nohaplotig	CDS	77883762	77884291	.	+	2	Parent=FBgn0259139.1.mrna1;Target=FBgn0259139.1 899 1428 +
Chr2	stalkie_big_nohaplotig	CDS	77884806	77885009	.	+	0	Parent=FBgn0259139.1.mrna1;Target=FBgn0259139.1 1429 1632 +
Chr2	gffcl	locus	77895431	77947083	.	+	.	ID=RLOC_00018687;geneIDs=FBgn0051116.1.path1,comp158504_c0_seq1.path1,comp162658_c2_seq1.path1;transcripts=comp158504_c0_seq1.mrna1,FBgn0051116.1.mrna1,comp162658_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77895431	77947083	.	+	.	ID=comp158504_c0_seq1.mrna1;geneID=comp158504_c0_seq1.path1;Name=comp158504_c0_seq1;Dir=sensecoverage=99.3;identity=100.0;matches=5010;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018687
Chr2	stalkie_big_nohaplotig	exon	77895431	77895723	100	+	.	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 33 325 +
Chr2	stalkie_big_nohaplotig	exon	77900603	77902042	100	+	.	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 326 1765 +
Chr2	stalkie_big_nohaplotig	exon	77932198	77932305	100	+	.	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 1766 1873 +
Chr2	stalkie_big_nohaplotig	exon	77934447	77934634	100	+	.	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 1874 2061 +
Chr2	stalkie_big_nohaplotig	exon	77934727	77934855	100	+	.	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 2062 2190 +
Chr2	stalkie_big_nohaplotig	exon	77937997	77938130	100	+	.	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 2191 2324 +
Chr2	stalkie_big_nohaplotig	exon	77938270	77938426	100	+	.	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 2325 2481 +
Chr2	stalkie_big_nohaplotig	exon	77938511	77938721	100	+	.	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 2482 2692 +
Chr2	stalkie_big_nohaplotig	exon	77938795	77938896	100	+	.	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 2693 2794 +
Chr2	stalkie_big_nohaplotig	exon	77940482	77940716	100	+	.	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 2795 3029 +
Chr2	stalkie_big_nohaplotig	exon	77940784	77941436	100	+	.	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 3030 3682 +
Chr2	stalkie_big_nohaplotig	exon	77941505	77941946	99	+	.	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 3683 4124 +
Chr2	stalkie_big_nohaplotig	exon	77945013	77945048	100	+	.	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 4125 4160 +
Chr2	stalkie_big_nohaplotig	exon	77946130	77946363	100	+	.	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 4161 4394 +
Chr2	stalkie_big_nohaplotig	exon	77946434	77947083	99	+	.	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 4395 5044 +
Chr2	stalkie_big_nohaplotig	CDS	77932241	77932305	.	+	0	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 1809 1873 +
Chr2	stalkie_big_nohaplotig	CDS	77934447	77934634	.	+	1	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 1874 2061 +
Chr2	stalkie_big_nohaplotig	CDS	77934727	77934855	.	+	2	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 2062 2190 +
Chr2	stalkie_big_nohaplotig	CDS	77937997	77938130	.	+	2	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 2191 2324 +
Chr2	stalkie_big_nohaplotig	CDS	77938270	77938426	.	+	0	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 2325 2481 +
Chr2	stalkie_big_nohaplotig	CDS	77938511	77938721	.	+	2	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 2482 2692 +
Chr2	stalkie_big_nohaplotig	CDS	77938795	77938896	.	+	1	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 2693 2794 +
Chr2	stalkie_big_nohaplotig	CDS	77940482	77940716	.	+	1	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 2795 3029 +
Chr2	stalkie_big_nohaplotig	CDS	77940784	77941436	.	+	0	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 3030 3682 +
Chr2	stalkie_big_nohaplotig	CDS	77941505	77941946	.	+	1	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 3683 4124 +
Chr2	stalkie_big_nohaplotig	CDS	77945013	77945048	.	+	0	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 4125 4160 +
Chr2	stalkie_big_nohaplotig	CDS	77946130	77946363	.	+	0	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 4161 4394 +
Chr2	stalkie_big_nohaplotig	CDS	77946434	77946712	.	+	0	Parent=comp158504_c0_seq1.mrna1;Target=comp158504_c0_seq1 4395 4673 +
Chr2	stalkie_big_nohaplotig	mRNA	77932198	77946709	.	+	.	ID=FBgn0051116.1.mrna1;geneID=FBgn0051116.1.path1;Name=FBgn0051116.1;Dir=sensecoverage=92.0;identity=100.0;matches=2846;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018687
Chr2	stalkie_big_nohaplotig	exon	77932198	77932305	100	+	.	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 250 357 +
Chr2	stalkie_big_nohaplotig	exon	77934469	77934634	100	+	.	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 358 523 +
Chr2	stalkie_big_nohaplotig	exon	77934727	77934855	100	+	.	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 524 652 +
Chr2	stalkie_big_nohaplotig	exon	77937997	77938130	100	+	.	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 653 786 +
Chr2	stalkie_big_nohaplotig	exon	77938270	77938426	100	+	.	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 787 943 +
Chr2	stalkie_big_nohaplotig	exon	77938511	77938721	100	+	.	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 944 1154 +
Chr2	stalkie_big_nohaplotig	exon	77938795	77938896	100	+	.	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 1155 1256 +
Chr2	stalkie_big_nohaplotig	exon	77940482	77940716	100	+	.	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 1257 1491 +
Chr2	stalkie_big_nohaplotig	exon	77940784	77941436	100	+	.	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 1492 2144 +
Chr2	stalkie_big_nohaplotig	exon	77941505	77941946	99	+	.	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 2145 2586 +
Chr2	stalkie_big_nohaplotig	exon	77946130	77946363	100	+	.	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 2587 2820 +
Chr2	stalkie_big_nohaplotig	exon	77946434	77946709	100	+	.	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 2821 3096 +
Chr2	stalkie_big_nohaplotig	CDS	77932198	77932305	.	+	0	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 250 357 +
Chr2	stalkie_big_nohaplotig	CDS	77934469	77934634	.	+	0	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 358 523 +
Chr2	stalkie_big_nohaplotig	CDS	77934727	77934855	.	+	2	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 524 652 +
Chr2	stalkie_big_nohaplotig	CDS	77937997	77938130	.	+	2	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 653 786 +
Chr2	stalkie_big_nohaplotig	CDS	77938270	77938426	.	+	0	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 787 943 +
Chr2	stalkie_big_nohaplotig	CDS	77938511	77938721	.	+	2	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 944 1154 +
Chr2	stalkie_big_nohaplotig	CDS	77938795	77938896	.	+	1	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 1155 1256 +
Chr2	stalkie_big_nohaplotig	CDS	77940482	77940716	.	+	1	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 1257 1491 +
Chr2	stalkie_big_nohaplotig	CDS	77940784	77941436	.	+	0	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 1492 2144 +
Chr2	stalkie_big_nohaplotig	CDS	77941505	77941946	.	+	1	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 2145 2586 +
Chr2	stalkie_big_nohaplotig	CDS	77946130	77946363	.	+	0	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 2587 2820 +
Chr2	stalkie_big_nohaplotig	CDS	77946434	77946709	.	+	0	Parent=FBgn0051116.1.mrna1;Target=FBgn0051116.1 2821 3096 +
Chr2	stalkie_big_nohaplotig	mRNA	77941924	77943984	.	+	.	ID=comp162658_c2_seq1.mrna1;geneID=comp162658_c2_seq1.path1;Name=comp162658_c2_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=1915;mismatches=24;indels=15;unknowns=0;Target=comp162658_c2_seq1 164 3 .;locus=RLOC_00018687
Chr2	stalkie_big_nohaplotig	exon	77941924	77943163	99	+	.	Parent=comp162658_c2_seq1.mrna1;Target=comp162658_c2_seq1 1239 1 .
Chr2	stalkie_big_nohaplotig	exon	77943172	77943179	100	+	.	Parent=comp162658_c2_seq1.mrna1;Target=comp162658_c2_seq1 1348 1341 .
Chr2	stalkie_big_nohaplotig	exon	77943185	77943260	76	+	.	Parent=comp162658_c2_seq1.mrna1;Target=comp162658_c2_seq1 1876 1789 .
Chr2	stalkie_big_nohaplotig	exon	77943268	77943277	100	+	.	Parent=comp162658_c2_seq1.mrna1;Target=comp162658_c2_seq1 2160 2151 .
Chr2	stalkie_big_nohaplotig	exon	77943378	77943984	98	+	.	Parent=comp162658_c2_seq1.mrna1;Target=comp162658_c2_seq1 3133 2527 .
Chr2	stalkie_big_nohaplotig	CDS	77941926	77942087	.	+	0	Parent=comp162658_c2_seq1.mrna1
Chr2	gffcl	locus	77935765	77936817	.	+	.	ID=RLOC_00018688;geneIDs=comp152350_c0_seq1.path1;transcripts=comp152350_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77935765	77936817	.	+	.	ID=comp152350_c0_seq1.mrna1;geneID=comp152350_c0_seq1.path1;Name=comp152350_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.1;matches=1003;mismatches=19;indels=33;unknowns=0;Target=comp152350_c0_seq1 1024 1 .;CDS_Target=comp152350_c0_seq1 110 3 .;locus=RLOC_00018688
Chr2	stalkie_big_nohaplotig	exon	77935765	77936817	95	+	.	Parent=comp152350_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	77935767	77935874	.	+	0	Parent=comp152350_c0_seq1.mrna1
Chr2	gffcl	locus	77948112	77949774	.	-	.	ID=RLOC_00018689;geneIDs=comp161929_c0_seq1.path2;transcripts=comp161929_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	77948112	77949774	.	-	.	ID=comp161929_c0_seq1.mrna2;geneID=comp161929_c0_seq1.path2;Name=comp161929_c0_seq1;Dir=indeterminatecoverage=63.0;identity=99.5;matches=1654;mismatches=7;indels=2;unknowns=0;Target=comp161929_c0_seq1 2617 957 .;locus=RLOC_00018689
Chr2	stalkie_big_nohaplotig	exon	77948112	77949774	99	-	.	Parent=comp161929_c0_seq1.mrna2
Chr2	gffcl	locus	77973287	77976390	.	+	.	ID=RLOC_00018691;geneIDs=FBgn0027865.1.path1;transcripts=FBgn0027865.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	77973287	77976390	.	+	.	ID=FBgn0027865.1.mrna1;geneID=FBgn0027865.1.path1;Name=FBgn0027865.1;Dir=sensecoverage=90.4;identity=99.9;matches=737;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018691
Chr2	stalkie_big_nohaplotig	exon	77973287	77973481	99	+	.	Parent=FBgn0027865.1.mrna1;Target=FBgn0027865.1 79 273 +
Chr2	stalkie_big_nohaplotig	exon	77973759	77973938	100	+	.	Parent=FBgn0027865.1.mrna1;Target=FBgn0027865.1 274 453 +
Chr2	stalkie_big_nohaplotig	exon	77975958	77976173	100	+	.	Parent=FBgn0027865.1.mrna1;Target=FBgn0027865.1 454 669 +
Chr2	stalkie_big_nohaplotig	exon	77976244	77976390	100	+	.	Parent=FBgn0027865.1.mrna1;Target=FBgn0027865.1 670 816 +
Chr2	stalkie_big_nohaplotig	CDS	77973287	77973481	.	+	0	Parent=FBgn0027865.1.mrna1;Target=FBgn0027865.1 79 273 +
Chr2	stalkie_big_nohaplotig	CDS	77973759	77973938	.	+	0	Parent=FBgn0027865.1.mrna1;Target=FBgn0027865.1 274 453 +
Chr2	stalkie_big_nohaplotig	CDS	77975958	77976173	.	+	0	Parent=FBgn0027865.1.mrna1;Target=FBgn0027865.1 454 669 +
Chr2	stalkie_big_nohaplotig	CDS	77976244	77976390	.	+	0	Parent=FBgn0027865.1.mrna1;Target=FBgn0027865.1 670 816 +
Chr2	stalkie_big_nohaplotig	mRNA	77984705	77987204	.	-	.	ID=comp163613_c0_seq1.mrna2;geneID=comp163613_c0_seq1.path2;Name=comp163613_c0_seq1;Dir=indeterminatecoverage=89.4;identity=99.5;matches=2487;mismatches=13;indels=0;unknowns=0;Target=comp163613_c0_seq1 2795 296 .;CDS_Target=comp163613_c0_seq1 1888 1616 .;locus=RLOC_00018692
Chr2	stalkie_big_nohaplotig	exon	77984705	77987204	99	-	.	Parent=comp163613_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	77985612	77985884	.	-	0	Parent=comp163613_c0_seq1.mrna2
Chr2	gffcl	locus	78017148	78021746	.	-	.	ID=RLOC_00018693;geneIDs=FBgn0039379.1.path2;transcripts=FBgn0039379.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	78017148	78021746	.	-	.	ID=FBgn0039379.1.mrna2;geneID=FBgn0039379.1.path2;Name=FBgn0039379.1;Dir=sensecoverage=100.0;identity=100.0;matches=1662;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018693
Chr2	stalkie_big_nohaplotig	exon	78017148	78017996	100	-	.	Parent=FBgn0039379.1.mrna2;Target=FBgn0039379.1 814 1662 +
Chr2	stalkie_big_nohaplotig	exon	78018059	78018239	100	-	.	Parent=FBgn0039379.1.mrna2;Target=FBgn0039379.1 633 813 +
Chr2	stalkie_big_nohaplotig	exon	78018864	78019010	100	-	.	Parent=FBgn0039379.1.mrna2;Target=FBgn0039379.1 486 632 +
Chr2	stalkie_big_nohaplotig	exon	78021129	78021338	100	-	.	Parent=FBgn0039379.1.mrna2;Target=FBgn0039379.1 276 485 +
Chr2	stalkie_big_nohaplotig	exon	78021410	78021600	100	-	.	Parent=FBgn0039379.1.mrna2;Target=FBgn0039379.1 85 275 +
Chr2	stalkie_big_nohaplotig	exon	78021663	78021746	100	-	.	Parent=FBgn0039379.1.mrna2;Target=FBgn0039379.1 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	78017148	78017996	.	-	0	Parent=FBgn0039379.1.mrna2;Target=FBgn0039379.1 814 1662 +
Chr2	stalkie_big_nohaplotig	CDS	78018059	78018239	.	-	1	Parent=FBgn0039379.1.mrna2;Target=FBgn0039379.1 633 813 +
Chr2	stalkie_big_nohaplotig	CDS	78018864	78019010	.	-	1	Parent=FBgn0039379.1.mrna2;Target=FBgn0039379.1 486 632 +
Chr2	stalkie_big_nohaplotig	CDS	78021129	78021338	.	-	1	Parent=FBgn0039379.1.mrna2;Target=FBgn0039379.1 276 485 +
Chr2	stalkie_big_nohaplotig	CDS	78021410	78021600	.	-	0	Parent=FBgn0039379.1.mrna2;Target=FBgn0039379.1 85 275 +
Chr2	stalkie_big_nohaplotig	CDS	78021663	78021746	.	-	0	Parent=FBgn0039379.1.mrna2;Target=FBgn0039379.1 1 84 +
Chr2	gffcl	locus	78019940	78020284	.	+	.	ID=RLOC_00018694;geneIDs=comp145995_c0_seq1.path2;transcripts=comp145995_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	78019940	78020284	.	+	.	ID=comp145995_c0_seq1.mrna2;geneID=comp145995_c0_seq1.path2;Name=comp145995_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.4;matches=329;mismatches=16;indels=0;unknowns=0;Target=comp145995_c0_seq1 345 1 .;CDS_Target=comp145995_c0_seq1 106 2 .;locus=RLOC_00018694
Chr2	stalkie_big_nohaplotig	exon	78019940	78020284	95	+	.	Parent=comp145995_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	78019941	78020045	.	+	0	Parent=comp145995_c0_seq1.mrna2
Chr2	gffcl	locus	78022476	78023050	.	+	.	ID=RLOC_00018695;geneIDs=FBgn0026753.1.path2;transcripts=FBgn0026753.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	78022476	78023050	.	+	.	ID=FBgn0026753.1.mrna2;geneID=FBgn0026753.1.path2;Name=FBgn0026753.1;Dir=sensecoverage=100.0;identity=100.0;matches=369;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018695
Chr2	stalkie_big_nohaplotig	exon	78022476	78022575	100	+	.	Parent=FBgn0026753.1.mrna2;Target=FBgn0026753.1 1 100 +
Chr2	stalkie_big_nohaplotig	exon	78022683	78022783	100	+	.	Parent=FBgn0026753.1.mrna2;Target=FBgn0026753.1 101 201 +
Chr2	stalkie_big_nohaplotig	exon	78022883	78023050	100	+	.	Parent=FBgn0026753.1.mrna2;Target=FBgn0026753.1 202 369 +
Chr2	stalkie_big_nohaplotig	CDS	78022476	78022575	.	+	0	Parent=FBgn0026753.1.mrna2;Target=FBgn0026753.1 1 100 +
Chr2	stalkie_big_nohaplotig	CDS	78022683	78022783	.	+	2	Parent=FBgn0026753.1.mrna2;Target=FBgn0026753.1 101 201 +
Chr2	stalkie_big_nohaplotig	CDS	78022883	78023050	.	+	0	Parent=FBgn0026753.1.mrna2;Target=FBgn0026753.1 202 369 +
Chr2	gffcl	locus	78024314	78025351	.	-	.	ID=RLOC_00018696;geneIDs=FBgn0002940.1.path1,comp135732_c0_seq1.path1;transcripts=FBgn0002940.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78024592	78025351	.	-	.	ID=FBgn0002940.1.mrna1;geneID=FBgn0002940.1.path1;Name=FBgn0002940.1;Dir=sensecoverage=50.9;identity=100.0;matches=577;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018696
Chr2	stalkie_big_nohaplotig	exon	78024592	78025078	100	-	.	Parent=FBgn0002940.1.mrna1;Target=FBgn0002940.1 91 577 +
Chr2	stalkie_big_nohaplotig	exon	78025141	78025207	100	-	.	Parent=FBgn0002940.1.mrna1;Target=FBgn0002940.1 24 90 +
Chr2	stalkie_big_nohaplotig	exon	78025329	78025351	100	-	.	Parent=FBgn0002940.1.mrna1;Target=FBgn0002940.1 1 23 +
Chr2	stalkie_big_nohaplotig	CDS	78024593	78025078	.	-	0	Parent=FBgn0002940.1.mrna1;Target=FBgn0002940.1 91 576 +
Chr2	stalkie_big_nohaplotig	CDS	78025141	78025207	.	-	1	Parent=FBgn0002940.1.mrna1;Target=FBgn0002940.1 24 90 +
Chr2	stalkie_big_nohaplotig	CDS	78025329	78025351	.	-	0	Parent=FBgn0002940.1.mrna1;Target=FBgn0002940.1 1 23 +
Chr2	gffcl	locus	78029580	78030334	.	-	.	ID=RLOC_00018697;geneIDs=comp145155_c0_seq1.path1;transcripts=comp145155_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78029580	78030334	.	-	.	ID=comp145155_c0_seq1.mrna1;geneID=comp145155_c0_seq1.path1;Name=comp145155_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=751;mismatches=2;indels=12;unknowns=0;Target=comp145155_c0_seq1 763 1 .;CDS_Target=comp145155_c0_seq1 470 3 .;locus=RLOC_00018697
Chr2	stalkie_big_nohaplotig	exon	78029580	78030334	98	-	.	Parent=comp145155_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78029874	78030332	.	-	0	Parent=comp145155_c0_seq1.mrna1
Chr2	gffcl	locus	78031391	78056478	.	+	.	ID=RLOC_00018698;geneIDs=FBgn0038744.1.path1;transcripts=FBgn0038744.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78031391	78056478	.	+	.	ID=FBgn0038744.1.mrna1;geneID=FBgn0038744.1.path1;Name=FBgn0038744.1;Dir=sensecoverage=95.6;identity=99.9;matches=1578;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018698
Chr2	stalkie_big_nohaplotig	exon	78031391	78031567	100	+	.	Parent=FBgn0038744.1.mrna1;Target=FBgn0038744.1 74 250 +
Chr2	stalkie_big_nohaplotig	exon	78041894	78042030	100	+	.	Parent=FBgn0038744.1.mrna1;Target=FBgn0038744.1 251 387 +
Chr2	stalkie_big_nohaplotig	exon	78054754	78054842	100	+	.	Parent=FBgn0038744.1.mrna1;Target=FBgn0038744.1 388 476 +
Chr2	stalkie_big_nohaplotig	exon	78054944	78055177	100	+	.	Parent=FBgn0038744.1.mrna1;Target=FBgn0038744.1 477 710 +
Chr2	stalkie_big_nohaplotig	exon	78055246	78055516	99	+	.	Parent=FBgn0038744.1.mrna1;Target=FBgn0038744.1 711 981 +
Chr2	stalkie_big_nohaplotig	exon	78055581	78055930	100	+	.	Parent=FBgn0038744.1.mrna1;Target=FBgn0038744.1 982 1331 +
Chr2	stalkie_big_nohaplotig	exon	78055989	78056088	100	+	.	Parent=FBgn0038744.1.mrna1;Target=FBgn0038744.1 1332 1431 +
Chr2	stalkie_big_nohaplotig	exon	78056192	78056350	100	+	.	Parent=FBgn0038744.1.mrna1;Target=FBgn0038744.1 1432 1590 +
Chr2	stalkie_big_nohaplotig	exon	78056416	78056478	100	+	.	Parent=FBgn0038744.1.mrna1;Target=FBgn0038744.1 1591 1653 +
Chr2	stalkie_big_nohaplotig	CDS	78031393	78031567	.	+	0	Parent=FBgn0038744.1.mrna1;Target=FBgn0038744.1 76 250 +
Chr2	stalkie_big_nohaplotig	CDS	78041894	78042030	.	+	2	Parent=FBgn0038744.1.mrna1;Target=FBgn0038744.1 251 387 +
Chr2	stalkie_big_nohaplotig	CDS	78054754	78054842	.	+	0	Parent=FBgn0038744.1.mrna1;Target=FBgn0038744.1 388 476 +
Chr2	stalkie_big_nohaplotig	CDS	78054944	78055177	.	+	1	Parent=FBgn0038744.1.mrna1;Target=FBgn0038744.1 477 710 +
Chr2	stalkie_big_nohaplotig	CDS	78055246	78055516	.	+	1	Parent=FBgn0038744.1.mrna1;Target=FBgn0038744.1 711 981 +
Chr2	stalkie_big_nohaplotig	CDS	78055581	78055930	.	+	0	Parent=FBgn0038744.1.mrna1;Target=FBgn0038744.1 982 1331 +
Chr2	stalkie_big_nohaplotig	CDS	78055989	78056088	.	+	1	Parent=FBgn0038744.1.mrna1;Target=FBgn0038744.1 1332 1431 +
Chr2	stalkie_big_nohaplotig	CDS	78056192	78056350	.	+	0	Parent=FBgn0038744.1.mrna1;Target=FBgn0038744.1 1432 1590 +
Chr2	stalkie_big_nohaplotig	CDS	78056416	78056478	.	+	0	Parent=FBgn0038744.1.mrna1;Target=FBgn0038744.1 1591 1653 +
Chr2	gffcl	locus	78040769	78041645	.	+	.	ID=RLOC_00018699;geneIDs=ORF1663.path1;transcripts=ORF1663.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78040769	78041645	.	+	.	ID=ORF1663.mrna1;geneID=ORF1663.path1;Name=ORF1663;Dir=indeterminatecoverage=85.0;identity=99.5;matches=873;mismatches=4;indels=0;unknowns=0;Target=ORF1663 1032 156 .;CDS_Target=ORF1663 1032 157 .;locus=RLOC_00018699
Chr2	stalkie_big_nohaplotig	exon	78040769	78041645	99	+	.	Parent=ORF1663.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78040770	78041645	.	+	0	Parent=ORF1663.mrna1
Chr2	gffcl	locus	78057021	78059789	.	-	.	ID=RLOC_00018700;geneIDs=FBgn0038745.1.path1;transcripts=FBgn0038745.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78057021	78059789	.	-	.	ID=FBgn0038745.1.mrna1;geneID=FBgn0038745.1.path1;Name=FBgn0038745.1;Dir=sensecoverage=100.0;identity=99.9;matches=1811;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018700
Chr2	stalkie_big_nohaplotig	exon	78057021	78057209	100	-	.	Parent=FBgn0038745.1.mrna1;Target=FBgn0038745.1 1624 1812 +
Chr2	stalkie_big_nohaplotig	exon	78057282	78057503	100	-	.	Parent=FBgn0038745.1.mrna1;Target=FBgn0038745.1 1402 1623 +
Chr2	stalkie_big_nohaplotig	exon	78057562	78057711	100	-	.	Parent=FBgn0038745.1.mrna1;Target=FBgn0038745.1 1252 1401 +
Chr2	stalkie_big_nohaplotig	exon	78057772	78058048	100	-	.	Parent=FBgn0038745.1.mrna1;Target=FBgn0038745.1 975 1251 +
Chr2	stalkie_big_nohaplotig	exon	78058119	78059004	99	-	.	Parent=FBgn0038745.1.mrna1;Target=FBgn0038745.1 89 974 +
Chr2	stalkie_big_nohaplotig	exon	78059702	78059789	100	-	.	Parent=FBgn0038745.1.mrna1;Target=FBgn0038745.1 1 88 +
Chr2	stalkie_big_nohaplotig	CDS	78057021	78057209	.	-	0	Parent=FBgn0038745.1.mrna1;Target=FBgn0038745.1 1624 1812 +
Chr2	stalkie_big_nohaplotig	CDS	78057282	78057503	.	-	0	Parent=FBgn0038745.1.mrna1;Target=FBgn0038745.1 1402 1623 +
Chr2	stalkie_big_nohaplotig	CDS	78057562	78057711	.	-	0	Parent=FBgn0038745.1.mrna1;Target=FBgn0038745.1 1252 1401 +
Chr2	stalkie_big_nohaplotig	CDS	78057772	78058048	.	-	1	Parent=FBgn0038745.1.mrna1;Target=FBgn0038745.1 975 1251 +
Chr2	stalkie_big_nohaplotig	CDS	78058119	78059004	.	-	2	Parent=FBgn0038745.1.mrna1;Target=FBgn0038745.1 89 974 +
Chr2	stalkie_big_nohaplotig	CDS	78059702	78059789	.	-	0	Parent=FBgn0038745.1.mrna1;Target=FBgn0038745.1 1 88 +
Chr2	gffcl	locus	78060278	78061190	.	-	.	ID=RLOC_00018702;geneIDs=FBgn0038746.1.path1;transcripts=FBgn0038746.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78060278	78061190	.	-	.	ID=FBgn0038746.1.mrna1;geneID=FBgn0038746.1.path1;Name=FBgn0038746.1;Dir=sensecoverage=100.0;identity=100.0;matches=861;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018702
Chr2	stalkie_big_nohaplotig	exon	78060278	78061026	100	-	.	Parent=FBgn0038746.1.mrna1;Target=FBgn0038746.1 113 861 +
Chr2	stalkie_big_nohaplotig	exon	78061079	78061190	100	-	.	Parent=FBgn0038746.1.mrna1;Target=FBgn0038746.1 1 112 +
Chr2	stalkie_big_nohaplotig	CDS	78060278	78061026	.	-	2	Parent=FBgn0038746.1.mrna1;Target=FBgn0038746.1 113 861 +
Chr2	stalkie_big_nohaplotig	CDS	78061079	78061190	.	-	0	Parent=FBgn0038746.1.mrna1;Target=FBgn0038746.1 1 112 +
Chr2	gffcl	locus	78075357	78075803	.	+	.	ID=RLOC_00018703;geneIDs=FBgn0038749.1.path1;transcripts=FBgn0038749.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78075357	78075803	.	+	.	ID=FBgn0038749.1.mrna1;geneID=FBgn0038749.1.path1;Name=FBgn0038749.1;Dir=sensecoverage=100.0;identity=99.7;matches=365;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018703
Chr2	stalkie_big_nohaplotig	exon	78075357	78075594	99	+	.	Parent=FBgn0038749.1.mrna1;Target=FBgn0038749.1 1 238 +
Chr2	stalkie_big_nohaplotig	exon	78075676	78075803	100	+	.	Parent=FBgn0038749.1.mrna1;Target=FBgn0038749.1 239 366 +
Chr2	stalkie_big_nohaplotig	CDS	78075357	78075594	.	+	0	Parent=FBgn0038749.1.mrna1;Target=FBgn0038749.1 1 238 +
Chr2	stalkie_big_nohaplotig	CDS	78075676	78075803	.	+	2	Parent=FBgn0038749.1.mrna1;Target=FBgn0038749.1 239 366 +
Chr2	gffcl	locus	78076403	78076921	.	+	.	ID=RLOC_00018704;geneIDs=comp139341_c0_seq1.path1;transcripts=comp139341_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78076403	78076921	.	+	.	ID=comp139341_c0_seq1.mrna1;geneID=comp139341_c0_seq1.path1;Name=comp139341_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=518;mismatches=1;indels=0;unknowns=0;Target=comp139341_c0_seq1 519 1 .;CDS_Target=comp139341_c0_seq1 320 240 .;locus=RLOC_00018704
Chr2	stalkie_big_nohaplotig	exon	78076403	78076921	99	+	.	Parent=comp139341_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78076642	78076722	.	+	0	Parent=comp139341_c0_seq1.mrna1
Chr2	gffcl	locus	78082287	78090505	.	+	.	ID=RLOC_00018705;geneIDs=FBgn0036348.1.path1;transcripts=FBgn0036348.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78082287	78090505	.	+	.	ID=FBgn0036348.1.mrna1;geneID=FBgn0036348.1.path1;Name=FBgn0036348.1;Dir=sensecoverage=100.0;identity=99.9;matches=4632;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018705
Chr2	stalkie_big_nohaplotig	exon	78082287	78082303	100	+	.	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 1 17 +
Chr2	stalkie_big_nohaplotig	exon	78082367	78082632	100	+	.	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 18 283 +
Chr2	stalkie_big_nohaplotig	exon	78082782	78083164	99	+	.	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 284 666 +
Chr2	stalkie_big_nohaplotig	exon	78083227	78084425	99	+	.	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 667 1865 +
Chr2	stalkie_big_nohaplotig	exon	78086173	78086932	100	+	.	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 1866 2625 +
Chr2	stalkie_big_nohaplotig	exon	78086998	78087225	100	+	.	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 2626 2853 +
Chr2	stalkie_big_nohaplotig	exon	78087321	78087814	99	+	.	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 2854 3347 +
Chr2	stalkie_big_nohaplotig	exon	78088236	78088797	100	+	.	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 3348 3909 +
Chr2	stalkie_big_nohaplotig	exon	78088860	78089003	100	+	.	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 3910 4053 +
Chr2	stalkie_big_nohaplotig	exon	78089081	78089224	100	+	.	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 4054 4197 +
Chr2	stalkie_big_nohaplotig	exon	78089283	78089422	100	+	.	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 4198 4337 +
Chr2	stalkie_big_nohaplotig	exon	78089537	78089698	100	+	.	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 4338 4499 +
Chr2	stalkie_big_nohaplotig	exon	78090370	78090505	100	+	.	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 4500 4635 +
Chr2	stalkie_big_nohaplotig	CDS	78082287	78082303	.	+	0	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 1 17 +
Chr2	stalkie_big_nohaplotig	CDS	78082367	78082632	.	+	1	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 18 283 +
Chr2	stalkie_big_nohaplotig	CDS	78082782	78083164	.	+	2	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 284 666 +
Chr2	stalkie_big_nohaplotig	CDS	78083227	78084425	.	+	0	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 667 1865 +
Chr2	stalkie_big_nohaplotig	CDS	78086173	78086932	.	+	1	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 1866 2625 +
Chr2	stalkie_big_nohaplotig	CDS	78086998	78087225	.	+	0	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 2626 2853 +
Chr2	stalkie_big_nohaplotig	CDS	78087321	78087814	.	+	0	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 2854 3347 +
Chr2	stalkie_big_nohaplotig	CDS	78088236	78088797	.	+	1	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 3348 3909 +
Chr2	stalkie_big_nohaplotig	CDS	78088860	78089003	.	+	0	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 3910 4053 +
Chr2	stalkie_big_nohaplotig	CDS	78089081	78089224	.	+	0	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 4054 4197 +
Chr2	stalkie_big_nohaplotig	CDS	78089283	78089422	.	+	0	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 4198 4337 +
Chr2	stalkie_big_nohaplotig	CDS	78089537	78089698	.	+	1	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 4338 4499 +
Chr2	stalkie_big_nohaplotig	CDS	78090370	78090505	.	+	1	Parent=FBgn0036348.1.mrna1;Target=FBgn0036348.1 4500 4635 +
Chr2	gffcl	locus	78090635	78095984	.	-	.	ID=RLOC_00018706;geneIDs=FBgn0038751.1.path1;transcripts=FBgn0038751.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78090635	78095984	.	-	.	ID=FBgn0038751.1.mrna1;geneID=FBgn0038751.1.path1;Name=FBgn0038751.1;Dir=sensecoverage=100.0;identity=99.7;matches=1468;mismatches=5;indels=0;unknowns=0;locus=RLOC_00018706
Chr2	stalkie_big_nohaplotig	exon	78090635	78090698	100	-	.	Parent=FBgn0038751.1.mrna1;Target=FBgn0038751.1 1410 1473 +
Chr2	stalkie_big_nohaplotig	exon	78091921	78092406	100	-	.	Parent=FBgn0038751.1.mrna1;Target=FBgn0038751.1 924 1409 +
Chr2	stalkie_big_nohaplotig	exon	78092473	78092768	99	-	.	Parent=FBgn0038751.1.mrna1;Target=FBgn0038751.1 628 923 +
Chr2	stalkie_big_nohaplotig	exon	78093399	78093557	100	-	.	Parent=FBgn0038751.1.mrna1;Target=FBgn0038751.1 469 627 +
Chr2	stalkie_big_nohaplotig	exon	78093624	78093787	99	-	.	Parent=FBgn0038751.1.mrna1;Target=FBgn0038751.1 305 468 +
Chr2	stalkie_big_nohaplotig	exon	78093848	78094072	99	-	.	Parent=FBgn0038751.1.mrna1;Target=FBgn0038751.1 80 304 +
Chr2	stalkie_big_nohaplotig	exon	78095906	78095984	100	-	.	Parent=FBgn0038751.1.mrna1;Target=FBgn0038751.1 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	78090635	78090698	.	-	1	Parent=FBgn0038751.1.mrna1;Target=FBgn0038751.1 1410 1473 +
Chr2	stalkie_big_nohaplotig	CDS	78091921	78092406	.	-	1	Parent=FBgn0038751.1.mrna1;Target=FBgn0038751.1 924 1409 +
Chr2	stalkie_big_nohaplotig	CDS	78092473	78092768	.	-	0	Parent=FBgn0038751.1.mrna1;Target=FBgn0038751.1 628 923 +
Chr2	stalkie_big_nohaplotig	CDS	78093399	78093557	.	-	0	Parent=FBgn0038751.1.mrna1;Target=FBgn0038751.1 469 627 +
Chr2	stalkie_big_nohaplotig	CDS	78093624	78093787	.	-	2	Parent=FBgn0038751.1.mrna1;Target=FBgn0038751.1 305 468 +
Chr2	stalkie_big_nohaplotig	CDS	78093848	78094072	.	-	2	Parent=FBgn0038751.1.mrna1;Target=FBgn0038751.1 80 304 +
Chr2	stalkie_big_nohaplotig	CDS	78095906	78095984	.	-	0	Parent=FBgn0038751.1.mrna1;Target=FBgn0038751.1 1 79 +
Chr2	gffcl	locus	78097681	78098091	.	-	.	ID=RLOC_00018707;geneIDs=comp147626_c0_seq1.path1;transcripts=comp147626_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78097681	78098091	.	-	.	ID=comp147626_c0_seq1.mrna1;geneID=comp147626_c0_seq1.path1;Name=comp147626_c0_seq1;Dir=indeterminatecoverage=91.3;identity=92.1;matches=396;mismatches=15;indels=19;unknowns=0;Target=comp147626_c0_seq1 449 20 .;CDS_Target=comp147626_c0_seq1 272 222 .;locus=RLOC_00018707
Chr2	stalkie_big_nohaplotig	exon	78097681	78098091	92	-	.	Parent=comp147626_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78097839	78097889	.	-	0	Parent=comp147626_c0_seq1.mrna1
Chr2	gffcl	locus	78098311	78105082	.	-	.	ID=RLOC_00018708;geneIDs=FBgn0038752.1.path1;transcripts=FBgn0038752.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78098311	78105082	.	-	.	ID=FBgn0038752.1.mrna1;geneID=FBgn0038752.1.path1;Name=FBgn0038752.1;Dir=sensecoverage=100.0;identity=99.9;matches=1739;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018708
Chr2	stalkie_big_nohaplotig	exon	78098311	78098699	99	-	.	Parent=FBgn0038752.1.mrna1;Target=FBgn0038752.1 1352 1740 +
Chr2	stalkie_big_nohaplotig	exon	78098767	78098910	100	-	.	Parent=FBgn0038752.1.mrna1;Target=FBgn0038752.1 1208 1351 +
Chr2	stalkie_big_nohaplotig	exon	78098977	78099480	100	-	.	Parent=FBgn0038752.1.mrna1;Target=FBgn0038752.1 704 1207 +
Chr2	stalkie_big_nohaplotig	exon	78104326	78104480	100	-	.	Parent=FBgn0038752.1.mrna1;Target=FBgn0038752.1 549 703 +
Chr2	stalkie_big_nohaplotig	exon	78104535	78105082	100	-	.	Parent=FBgn0038752.1.mrna1;Target=FBgn0038752.1 1 548 +
Chr2	stalkie_big_nohaplotig	CDS	78098311	78098699	.	-	2	Parent=FBgn0038752.1.mrna1;Target=FBgn0038752.1 1352 1740 +
Chr2	stalkie_big_nohaplotig	CDS	78098767	78098910	.	-	2	Parent=FBgn0038752.1.mrna1;Target=FBgn0038752.1 1208 1351 +
Chr2	stalkie_big_nohaplotig	CDS	78098977	78099480	.	-	2	Parent=FBgn0038752.1.mrna1;Target=FBgn0038752.1 704 1207 +
Chr2	stalkie_big_nohaplotig	CDS	78104326	78104480	.	-	1	Parent=FBgn0038752.1.mrna1;Target=FBgn0038752.1 549 703 +
Chr2	stalkie_big_nohaplotig	CDS	78104535	78105082	.	-	0	Parent=FBgn0038752.1.mrna1;Target=FBgn0038752.1 1 548 +
Chr2	gffcl	locus	78130759	78132923	.	-	.	ID=RLOC_00018710;geneIDs=comp145036_c0_seq1.path1,comp154153_c0_seq1.path1;transcripts=comp154153_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78130759	78132017	.	-	.	ID=comp154153_c0_seq1.mrna1;geneID=comp154153_c0_seq1.path1;Name=comp154153_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.2;matches=1249;mismatches=10;indels=0;unknowns=0;Target=comp154153_c0_seq1 1260 2 .;CDS_Target=comp154153_c0_seq1 1124 936 .;locus=RLOC_00018710
Chr2	stalkie_big_nohaplotig	exon	78130759	78132017	99	-	.	Parent=comp154153_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78130895	78131083	.	-	0	Parent=comp154153_c0_seq1.mrna1
Chr2	gffcl	locus	78134159	78215997	.	-	.	ID=RLOC_00018711;geneIDs=FBgn0003513.1.path1;transcripts=FBgn0003513.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78134159	78215997	.	-	.	ID=FBgn0003513.1.mrna1;geneID=FBgn0003513.1.path1;Name=FBgn0003513.1;Dir=sensecoverage=100.0;identity=99.8;matches=2859;mismatches=0;indels=6;unknowns=0;locus=RLOC_00018711
Chr2	stalkie_big_nohaplotig	exon	78134159	78135223	99	-	.	Parent=FBgn0003513.1.mrna1;Target=FBgn0003513.1 1801 2859 +
Chr2	stalkie_big_nohaplotig	exon	78135287	78135667	100	-	.	Parent=FBgn0003513.1.mrna1;Target=FBgn0003513.1 1420 1800 +
Chr2	stalkie_big_nohaplotig	exon	78135731	78136058	100	-	.	Parent=FBgn0003513.1.mrna1;Target=FBgn0003513.1 1092 1419 +
Chr2	stalkie_big_nohaplotig	exon	78136135	78136213	100	-	.	Parent=FBgn0003513.1.mrna1;Target=FBgn0003513.1 1013 1091 +
Chr2	stalkie_big_nohaplotig	exon	78136281	78136387	100	-	.	Parent=FBgn0003513.1.mrna1;Target=FBgn0003513.1 906 1012 +
Chr2	stalkie_big_nohaplotig	exon	78136474	78136871	100	-	.	Parent=FBgn0003513.1.mrna1;Target=FBgn0003513.1 508 905 +
Chr2	stalkie_big_nohaplotig	exon	78143291	78143380	100	-	.	Parent=FBgn0003513.1.mrna1;Target=FBgn0003513.1 418 507 +
Chr2	stalkie_big_nohaplotig	exon	78159877	78160001	100	-	.	Parent=FBgn0003513.1.mrna1;Target=FBgn0003513.1 293 417 +
Chr2	stalkie_big_nohaplotig	exon	78176743	78176933	100	-	.	Parent=FBgn0003513.1.mrna1;Target=FBgn0003513.1 102 292 +
Chr2	stalkie_big_nohaplotig	exon	78215897	78215997	100	-	.	Parent=FBgn0003513.1.mrna1;Target=FBgn0003513.1 1 101 +
Chr2	stalkie_big_nohaplotig	CDS	78134159	78135223	.	-	0	Parent=FBgn0003513.1.mrna1;Target=FBgn0003513.1 1801 2859 +
Chr2	stalkie_big_nohaplotig	CDS	78135287	78135667	.	-	0	Parent=FBgn0003513.1.mrna1;Target=FBgn0003513.1 1420 1800 +
Chr2	stalkie_big_nohaplotig	CDS	78135731	78136058	.	-	1	Parent=FBgn0003513.1.mrna1;Target=FBgn0003513.1 1092 1419 +
Chr2	stalkie_big_nohaplotig	CDS	78136135	78136213	.	-	2	Parent=FBgn0003513.1.mrna1;Target=FBgn0003513.1 1013 1091 +
Chr2	stalkie_big_nohaplotig	CDS	78136281	78136387	.	-	1	Parent=FBgn0003513.1.mrna1;Target=FBgn0003513.1 906 1012 +
Chr2	stalkie_big_nohaplotig	CDS	78136474	78136871	.	-	0	Parent=FBgn0003513.1.mrna1;Target=FBgn0003513.1 508 905 +
Chr2	stalkie_big_nohaplotig	CDS	78143291	78143380	.	-	0	Parent=FBgn0003513.1.mrna1;Target=FBgn0003513.1 418 507 +
Chr2	stalkie_big_nohaplotig	CDS	78159877	78160001	.	-	2	Parent=FBgn0003513.1.mrna1;Target=FBgn0003513.1 293 417 +
Chr2	stalkie_big_nohaplotig	CDS	78176743	78176933	.	-	1	Parent=FBgn0003513.1.mrna1;Target=FBgn0003513.1 102 292 +
Chr2	stalkie_big_nohaplotig	CDS	78215897	78215997	.	-	0	Parent=FBgn0003513.1.mrna1;Target=FBgn0003513.1 1 101 +
Chr2	gffcl	locus	78139466	78250117	.	+	.	ID=RLOC_00018712;geneIDs=comp147898_c0_seq1.path1;transcripts=comp147898_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78139466	78250117	.	+	.	ID=comp147898_c0_seq1.mrna1;geneID=comp147898_c0_seq1.path1;Name=comp147898_c0_seq1;Dir=antisensecoverage=79.0;identity=90.6;matches=464;mismatches=22;indels=26;unknowns=0;Target=comp147898_c0_seq1 396 404 .;locus=RLOC_00018712
Chr2	stalkie_big_nohaplotig	exon	78139466	78139477	100	+	.	Parent=comp147898_c0_seq1.mrna1;Target=comp147898_c0_seq1 496 507 -
Chr2	stalkie_big_nohaplotig	exon	78145713	78145729	57	+	.	Parent=comp147898_c0_seq1.mrna1;Target=comp147898_c0_seq1 468 495 -
Chr2	stalkie_big_nohaplotig	exon	78159565	78159619	55	+	.	Parent=comp147898_c0_seq1.mrna1;Target=comp147898_c0_seq1 411 467 -
Chr2	stalkie_big_nohaplotig	exon	78163509	78163510	100	+	.	Parent=comp147898_c0_seq1.mrna1;Target=comp147898_c0_seq1 409 410 -
Chr2	stalkie_big_nohaplotig	exon	78192279	78192294	87	+	.	Parent=comp147898_c0_seq1.mrna1;Target=comp147898_c0_seq1 394 408 -
Chr2	stalkie_big_nohaplotig	exon	78242093	78242099	100	+	.	Parent=comp147898_c0_seq1.mrna1;Target=comp147898_c0_seq1 387 393 -
Chr2	stalkie_big_nohaplotig	exon	78249734	78250117	98	+	.	Parent=comp147898_c0_seq1.mrna1;Target=comp147898_c0_seq1 3 386 -
Chr2	stalkie_big_nohaplotig	CDS	78192283	78192292	.	+	0	Parent=comp147898_c0_seq1.mrna1
Chr2	gffcl	locus	78197752	78286030	.	+	.	ID=RLOC_00018713;geneIDs=comp139999_c0_seq1.path1;transcripts=comp139999_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78197752	78286030	.	+	.	ID=comp139999_c0_seq1.mrna1;geneID=comp139999_c0_seq1.path1;Name=comp139999_c0_seq1;Dir=sensecoverage=98.6;identity=99.8;matches=561;mismatches=1;indels=0;unknowns=0;Target=comp139999_c0_seq1 422 568 +;locus=RLOC_00018713
Chr2	stalkie_big_nohaplotig	exon	78197752	78197872	100	+	.	Parent=comp139999_c0_seq1.mrna1;Target=comp139999_c0_seq1 8 128 +
Chr2	stalkie_big_nohaplotig	exon	78285590	78286030	99	+	.	Parent=comp139999_c0_seq1.mrna1;Target=comp139999_c0_seq1 129 569 +
Chr2	stalkie_big_nohaplotig	CDS	78285883	78286029	.	+	0	Parent=comp139999_c0_seq1.mrna1
Chr2	gffcl	locus	78317858	78319976	.	-	.	ID=RLOC_00018714;geneIDs=FBgn0051279.1.path1;transcripts=FBgn0051279.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78317858	78319976	.	-	.	ID=FBgn0051279.1.mrna1;geneID=FBgn0051279.1.path1;Name=FBgn0051279.1;Dir=sensecoverage=100.0;identity=100.0;matches=1188;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018714
Chr2	stalkie_big_nohaplotig	exon	78317858	78318043	100	-	.	Parent=FBgn0051279.1.mrna1;Target=FBgn0051279.1 1003 1188 +
Chr2	stalkie_big_nohaplotig	exon	78318098	78318304	100	-	.	Parent=FBgn0051279.1.mrna1;Target=FBgn0051279.1 796 1002 +
Chr2	stalkie_big_nohaplotig	exon	78318584	78318709	100	-	.	Parent=FBgn0051279.1.mrna1;Target=FBgn0051279.1 670 795 +
Chr2	stalkie_big_nohaplotig	exon	78318777	78318931	100	-	.	Parent=FBgn0051279.1.mrna1;Target=FBgn0051279.1 515 669 +
Chr2	stalkie_big_nohaplotig	exon	78318986	78319127	100	-	.	Parent=FBgn0051279.1.mrna1;Target=FBgn0051279.1 373 514 +
Chr2	stalkie_big_nohaplotig	exon	78319206	78319286	100	-	.	Parent=FBgn0051279.1.mrna1;Target=FBgn0051279.1 292 372 +
Chr2	stalkie_big_nohaplotig	exon	78319348	78319460	100	-	.	Parent=FBgn0051279.1.mrna1;Target=FBgn0051279.1 179 291 +
Chr2	stalkie_big_nohaplotig	exon	78319799	78319976	100	-	.	Parent=FBgn0051279.1.mrna1;Target=FBgn0051279.1 1 178 +
Chr2	stalkie_big_nohaplotig	CDS	78317858	78318043	.	-	0	Parent=FBgn0051279.1.mrna1;Target=FBgn0051279.1 1003 1188 +
Chr2	stalkie_big_nohaplotig	CDS	78318098	78318304	.	-	0	Parent=FBgn0051279.1.mrna1;Target=FBgn0051279.1 796 1002 +
Chr2	stalkie_big_nohaplotig	CDS	78318584	78318709	.	-	0	Parent=FBgn0051279.1.mrna1;Target=FBgn0051279.1 670 795 +
Chr2	stalkie_big_nohaplotig	CDS	78318777	78318931	.	-	2	Parent=FBgn0051279.1.mrna1;Target=FBgn0051279.1 515 669 +
Chr2	stalkie_big_nohaplotig	CDS	78318986	78319127	.	-	0	Parent=FBgn0051279.1.mrna1;Target=FBgn0051279.1 373 514 +
Chr2	stalkie_big_nohaplotig	CDS	78319206	78319286	.	-	0	Parent=FBgn0051279.1.mrna1;Target=FBgn0051279.1 292 372 +
Chr2	stalkie_big_nohaplotig	CDS	78319348	78319460	.	-	2	Parent=FBgn0051279.1.mrna1;Target=FBgn0051279.1 179 291 +
Chr2	stalkie_big_nohaplotig	CDS	78319799	78319976	.	-	0	Parent=FBgn0051279.1.mrna1;Target=FBgn0051279.1 1 178 +
Chr2	gffcl	locus	78320449	78322134	.	+	.	ID=RLOC_00018715;geneIDs=FBgn0038424.1.path1;transcripts=FBgn0038424.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78320449	78322134	.	+	.	ID=FBgn0038424.1.mrna1;geneID=FBgn0038424.1.path1;Name=FBgn0038424.1;Dir=sensecoverage=100.0;identity=99.9;matches=1357;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018715
Chr2	stalkie_big_nohaplotig	exon	78320449	78320568	100	+	.	Parent=FBgn0038424.1.mrna1;Target=FBgn0038424.1 1 120 +
Chr2	stalkie_big_nohaplotig	exon	78320630	78320886	99	+	.	Parent=FBgn0038424.1.mrna1;Target=FBgn0038424.1 121 377 +
Chr2	stalkie_big_nohaplotig	exon	78320942	78321377	99	+	.	Parent=FBgn0038424.1.mrna1;Target=FBgn0038424.1 378 813 +
Chr2	stalkie_big_nohaplotig	exon	78321483	78321612	100	+	.	Parent=FBgn0038424.1.mrna1;Target=FBgn0038424.1 814 943 +
Chr2	stalkie_big_nohaplotig	exon	78321669	78321771	100	+	.	Parent=FBgn0038424.1.mrna1;Target=FBgn0038424.1 944 1046 +
Chr2	stalkie_big_nohaplotig	exon	78321822	78322134	100	+	.	Parent=FBgn0038424.1.mrna1;Target=FBgn0038424.1 1047 1359 +
Chr2	stalkie_big_nohaplotig	CDS	78320449	78320568	.	+	0	Parent=FBgn0038424.1.mrna1;Target=FBgn0038424.1 1 120 +
Chr2	stalkie_big_nohaplotig	CDS	78320630	78320886	.	+	0	Parent=FBgn0038424.1.mrna1;Target=FBgn0038424.1 121 377 +
Chr2	stalkie_big_nohaplotig	CDS	78320942	78321377	.	+	1	Parent=FBgn0038424.1.mrna1;Target=FBgn0038424.1 378 813 +
Chr2	stalkie_big_nohaplotig	CDS	78321483	78321612	.	+	0	Parent=FBgn0038424.1.mrna1;Target=FBgn0038424.1 814 943 +
Chr2	stalkie_big_nohaplotig	CDS	78321669	78321771	.	+	2	Parent=FBgn0038424.1.mrna1;Target=FBgn0038424.1 944 1046 +
Chr2	stalkie_big_nohaplotig	CDS	78321822	78322134	.	+	1	Parent=FBgn0038424.1.mrna1;Target=FBgn0038424.1 1047 1359 +
Chr2	gffcl	locus	78322387	78323320	.	-	.	ID=RLOC_00018716;geneIDs=comp144013_c2_seq1.path1;transcripts=comp144013_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78322387	78323320	.	-	.	ID=comp144013_c2_seq1.mrna1;geneID=comp144013_c2_seq1.path1;Name=comp144013_c2_seq1;Dir=indeterminatecoverage=98.6;identity=99.8;matches=932;mismatches=2;indels=0;unknowns=0;Target=comp144013_c2_seq1 947 14 .;CDS_Target=comp144013_c2_seq1 687 484 .;locus=RLOC_00018716
Chr2	stalkie_big_nohaplotig	exon	78322387	78323320	99	-	.	Parent=comp144013_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78322647	78322850	.	-	0	Parent=comp144013_c2_seq1.mrna1
Chr2	gffcl	locus	78323742	78323950	.	-	.	ID=RLOC_00018717;geneIDs=comp147560_c1_seq1.path1;transcripts=comp147560_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78323742	78323950	.	-	.	ID=comp147560_c1_seq1.mrna1;geneID=comp147560_c1_seq1.path1;Name=comp147560_c1_seq1;Dir=indeterminatecoverage=76.0;identity=100.0;matches=209;mismatches=0;indels=0;unknowns=0;Target=comp147560_c1_seq1 275 67 .;CDS_Target=comp147560_c1_seq1 203 69 .;locus=RLOC_00018717
Chr2	stalkie_big_nohaplotig	exon	78323742	78323950	100	-	.	Parent=comp147560_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78323814	78323948	.	-	0	Parent=comp147560_c1_seq1.mrna1
Chr2	gffcl	locus	78324354	78325238	.	+	.	ID=RLOC_00018718;geneIDs=FBgn0037878.1.path1;transcripts=FBgn0037878.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78324354	78325238	.	+	.	ID=FBgn0037878.1.mrna1;geneID=FBgn0037878.1.path1;Name=FBgn0037878.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=885;mismatches=0;indels=0;unknowns=0;Target=FBgn0037878.1 885 1 .;locus=RLOC_00018718
Chr2	stalkie_big_nohaplotig	exon	78324354	78325238	100	+	.	Parent=FBgn0037878.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78324354	78325238	.	+	0	Parent=FBgn0037878.1.mrna1
Chr2	gffcl	locus	78334744	78335183	.	-	.	ID=RLOC_00018719;geneIDs=comp152849_c0_seq1.path1;transcripts=comp152849_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78334744	78335183	.	-	.	ID=comp152849_c0_seq1.mrna1;geneID=comp152849_c0_seq1.path1;Name=comp152849_c0_seq1;Dir=indeterminatecoverage=98.4;identity=96.6;matches=425;mismatches=8;indels=7;unknowns=0;Target=comp152849_c0_seq1 439 7 .;CDS_Target=comp152849_c0_seq1 401 300 .;locus=RLOC_00018719
Chr2	stalkie_big_nohaplotig	exon	78334744	78335183	96	-	.	Parent=comp152849_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78334782	78334883	.	-	0	Parent=comp152849_c0_seq1.mrna1
Chr2	gffcl	locus	78335395	78336689	.	+	.	ID=RLOC_00018720;geneIDs=FBgn0037920.1.path1;transcripts=FBgn0037920.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78335395	78336689	.	+	.	ID=FBgn0037920.1.mrna1;geneID=FBgn0037920.1.path1;Name=FBgn0037920.1;Dir=sensecoverage=100.0;identity=100.0;matches=1053;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018720
Chr2	stalkie_big_nohaplotig	exon	78335395	78335544	100	+	.	Parent=FBgn0037920.1.mrna1;Target=FBgn0037920.1 1 150 +
Chr2	stalkie_big_nohaplotig	exon	78335598	78336133	100	+	.	Parent=FBgn0037920.1.mrna1;Target=FBgn0037920.1 151 686 +
Chr2	stalkie_big_nohaplotig	exon	78336196	78336330	100	+	.	Parent=FBgn0037920.1.mrna1;Target=FBgn0037920.1 687 821 +
Chr2	stalkie_big_nohaplotig	exon	78336396	78336506	100	+	.	Parent=FBgn0037920.1.mrna1;Target=FBgn0037920.1 822 932 +
Chr2	stalkie_big_nohaplotig	exon	78336569	78336689	100	+	.	Parent=FBgn0037920.1.mrna1;Target=FBgn0037920.1 933 1053 +
Chr2	stalkie_big_nohaplotig	CDS	78335395	78335544	.	+	0	Parent=FBgn0037920.1.mrna1;Target=FBgn0037920.1 1 150 +
Chr2	stalkie_big_nohaplotig	CDS	78335598	78336133	.	+	0	Parent=FBgn0037920.1.mrna1;Target=FBgn0037920.1 151 686 +
Chr2	stalkie_big_nohaplotig	CDS	78336196	78336330	.	+	1	Parent=FBgn0037920.1.mrna1;Target=FBgn0037920.1 687 821 +
Chr2	stalkie_big_nohaplotig	CDS	78336396	78336506	.	+	1	Parent=FBgn0037920.1.mrna1;Target=FBgn0037920.1 822 932 +
Chr2	stalkie_big_nohaplotig	CDS	78336569	78336689	.	+	1	Parent=FBgn0037920.1.mrna1;Target=FBgn0037920.1 933 1053 +
Chr2	gffcl	locus	78337327	78341217	.	-	.	ID=RLOC_00018721;geneIDs=FBgn0037921.1.path1;transcripts=FBgn0037921.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78337327	78341217	.	-	.	ID=FBgn0037921.1.mrna1;geneID=FBgn0037921.1.path1;Name=FBgn0037921.1;Dir=sensecoverage=100.0;identity=100.0;matches=1599;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018721
Chr2	stalkie_big_nohaplotig	exon	78337327	78337426	100	-	.	Parent=FBgn0037921.1.mrna1;Target=FBgn0037921.1 1500 1599 +
Chr2	stalkie_big_nohaplotig	exon	78337479	78337589	100	-	.	Parent=FBgn0037921.1.mrna1;Target=FBgn0037921.1 1389 1499 +
Chr2	stalkie_big_nohaplotig	exon	78337983	78338117	100	-	.	Parent=FBgn0037921.1.mrna1;Target=FBgn0037921.1 1254 1388 +
Chr2	stalkie_big_nohaplotig	exon	78338178	78339199	100	-	.	Parent=FBgn0037921.1.mrna1;Target=FBgn0037921.1 232 1253 +
Chr2	stalkie_big_nohaplotig	exon	78339260	78339472	100	-	.	Parent=FBgn0037921.1.mrna1;Target=FBgn0037921.1 19 231 +
Chr2	stalkie_big_nohaplotig	exon	78341200	78341217	100	-	.	Parent=FBgn0037921.1.mrna1;Target=FBgn0037921.1 1 18 +
Chr2	stalkie_big_nohaplotig	CDS	78337327	78337426	.	-	1	Parent=FBgn0037921.1.mrna1;Target=FBgn0037921.1 1500 1599 +
Chr2	stalkie_big_nohaplotig	CDS	78337479	78337589	.	-	1	Parent=FBgn0037921.1.mrna1;Target=FBgn0037921.1 1389 1499 +
Chr2	stalkie_big_nohaplotig	CDS	78337983	78338117	.	-	1	Parent=FBgn0037921.1.mrna1;Target=FBgn0037921.1 1254 1388 +
Chr2	stalkie_big_nohaplotig	CDS	78338178	78339199	.	-	0	Parent=FBgn0037921.1.mrna1;Target=FBgn0037921.1 232 1253 +
Chr2	stalkie_big_nohaplotig	CDS	78339260	78339472	.	-	0	Parent=FBgn0037921.1.mrna1;Target=FBgn0037921.1 19 231 +
Chr2	stalkie_big_nohaplotig	CDS	78341200	78341217	.	-	0	Parent=FBgn0037921.1.mrna1;Target=FBgn0037921.1 1 18 +
Chr2	gffcl	locus	78342723	78346233	.	.	.	ID=RLOC_00018722;geneIDs=FBgn0037922.1.path1,comp100186_c0_seq1.path1;transcripts=FBgn0037922.1.mrna1,comp100186_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78342723	78346233	.	+	.	ID=FBgn0037922.1.mrna1;geneID=FBgn0037922.1.path1;Name=FBgn0037922.1;Dir=sensecoverage=100.0;identity=100.0;matches=1206;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018722
Chr2	stalkie_big_nohaplotig	exon	78342723	78342789	100	+	.	Parent=FBgn0037922.1.mrna1;Target=FBgn0037922.1 1 67 +
Chr2	stalkie_big_nohaplotig	exon	78344583	78344719	100	+	.	Parent=FBgn0037922.1.mrna1;Target=FBgn0037922.1 68 204 +
Chr2	stalkie_big_nohaplotig	exon	78344789	78344914	100	+	.	Parent=FBgn0037922.1.mrna1;Target=FBgn0037922.1 205 330 +
Chr2	stalkie_big_nohaplotig	exon	78344968	78345428	100	+	.	Parent=FBgn0037922.1.mrna1;Target=FBgn0037922.1 331 791 +
Chr2	stalkie_big_nohaplotig	exon	78345490	78345624	100	+	.	Parent=FBgn0037922.1.mrna1;Target=FBgn0037922.1 792 926 +
Chr2	stalkie_big_nohaplotig	exon	78345687	78345797	100	+	.	Parent=FBgn0037922.1.mrna1;Target=FBgn0037922.1 927 1037 +
Chr2	stalkie_big_nohaplotig	exon	78346065	78346233	100	+	.	Parent=FBgn0037922.1.mrna1;Target=FBgn0037922.1 1038 1206 +
Chr2	stalkie_big_nohaplotig	CDS	78342723	78342789	.	+	0	Parent=FBgn0037922.1.mrna1;Target=FBgn0037922.1 1 67 +
Chr2	stalkie_big_nohaplotig	CDS	78344583	78344719	.	+	2	Parent=FBgn0037922.1.mrna1;Target=FBgn0037922.1 68 204 +
Chr2	stalkie_big_nohaplotig	CDS	78344789	78344914	.	+	0	Parent=FBgn0037922.1.mrna1;Target=FBgn0037922.1 205 330 +
Chr2	stalkie_big_nohaplotig	CDS	78344968	78345428	.	+	0	Parent=FBgn0037922.1.mrna1;Target=FBgn0037922.1 331 791 +
Chr2	stalkie_big_nohaplotig	CDS	78345490	78345624	.	+	1	Parent=FBgn0037922.1.mrna1;Target=FBgn0037922.1 792 926 +
Chr2	stalkie_big_nohaplotig	CDS	78345687	78345797	.	+	1	Parent=FBgn0037922.1.mrna1;Target=FBgn0037922.1 927 1037 +
Chr2	stalkie_big_nohaplotig	CDS	78346065	78346233	.	+	1	Parent=FBgn0037922.1.mrna1;Target=FBgn0037922.1 1038 1206 +
Chr2	stalkie_big_nohaplotig	mRNA	78345775	78346087	.	-	.	ID=comp100186_c0_seq1.mrna1;geneID=comp100186_c0_seq1.path1;Name=comp100186_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=312;mismatches=1;indels=0;unknowns=0;Target=comp100186_c0_seq1 313 1 .;CDS_Target=comp100186_c0_seq1 32 3 .;locus=RLOC_00018722
Chr2	stalkie_big_nohaplotig	exon	78345775	78346087	99	-	.	Parent=comp100186_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78346056	78346085	.	-	0	Parent=comp100186_c0_seq1.mrna1
Chr2	gffcl	locus	78346394	78347714	.	-	.	ID=RLOC_00018723;geneIDs=FBgn0037619.2.path1;transcripts=FBgn0037619.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78346394	78347714	.	-	.	ID=FBgn0037619.2.mrna1;geneID=FBgn0037619.2.path1;Name=FBgn0037619.2;Dir=sensecoverage=100.0;identity=100.0;matches=1050;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018723
Chr2	stalkie_big_nohaplotig	exon	78346394	78346502	100	-	.	Parent=FBgn0037619.2.mrna1;Target=FBgn0037619.2 942 1050 +
Chr2	stalkie_big_nohaplotig	exon	78346582	78346692	100	-	.	Parent=FBgn0037619.2.mrna1;Target=FBgn0037619.2 831 941 +
Chr2	stalkie_big_nohaplotig	exon	78346752	78346886	100	-	.	Parent=FBgn0037619.2.mrna1;Target=FBgn0037619.2 696 830 +
Chr2	stalkie_big_nohaplotig	exon	78346956	78347515	100	-	.	Parent=FBgn0037619.2.mrna1;Target=FBgn0037619.2 136 695 +
Chr2	stalkie_big_nohaplotig	exon	78347580	78347714	100	-	.	Parent=FBgn0037619.2.mrna1;Target=FBgn0037619.2 1 135 +
Chr2	stalkie_big_nohaplotig	CDS	78346394	78346502	.	-	1	Parent=FBgn0037619.2.mrna1;Target=FBgn0037619.2 942 1050 +
Chr2	stalkie_big_nohaplotig	CDS	78346582	78346692	.	-	1	Parent=FBgn0037619.2.mrna1;Target=FBgn0037619.2 831 941 +
Chr2	stalkie_big_nohaplotig	CDS	78346752	78346886	.	-	1	Parent=FBgn0037619.2.mrna1;Target=FBgn0037619.2 696 830 +
Chr2	stalkie_big_nohaplotig	CDS	78346956	78347515	.	-	0	Parent=FBgn0037619.2.mrna1;Target=FBgn0037619.2 136 695 +
Chr2	stalkie_big_nohaplotig	CDS	78347580	78347714	.	-	0	Parent=FBgn0037619.2.mrna1;Target=FBgn0037619.2 1 135 +
Chr2	gffcl	locus	78351182	78352503	.	-	.	ID=RLOC_00018724;geneIDs=FBgn0037621.1.path1;transcripts=FBgn0037621.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78351182	78352503	.	-	.	ID=FBgn0037621.1.mrna1;geneID=FBgn0037621.1.path1;Name=FBgn0037621.1;Dir=sensecoverage=94.2;identity=99.7;matches=995;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018724
Chr2	stalkie_big_nohaplotig	exon	78351182	78351280	98	-	.	Parent=FBgn0037621.1.mrna1;Target=FBgn0037621.1 900 998 +
Chr2	stalkie_big_nohaplotig	exon	78351435	78351545	100	-	.	Parent=FBgn0037621.1.mrna1;Target=FBgn0037621.1 789 899 +
Chr2	stalkie_big_nohaplotig	exon	78351600	78351734	100	-	.	Parent=FBgn0037621.1.mrna1;Target=FBgn0037621.1 654 788 +
Chr2	stalkie_big_nohaplotig	exon	78351790	78352319	99	-	.	Parent=FBgn0037621.1.mrna1;Target=FBgn0037621.1 124 653 +
Chr2	stalkie_big_nohaplotig	exon	78352381	78352503	100	-	.	Parent=FBgn0037621.1.mrna1;Target=FBgn0037621.1 1 123 +
Chr2	stalkie_big_nohaplotig	CDS	78351184	78351280	.	-	1	Parent=FBgn0037621.1.mrna1;Target=FBgn0037621.1 900 996 +
Chr2	stalkie_big_nohaplotig	CDS	78351435	78351545	.	-	1	Parent=FBgn0037621.1.mrna1;Target=FBgn0037621.1 789 899 +
Chr2	stalkie_big_nohaplotig	CDS	78351600	78351734	.	-	1	Parent=FBgn0037621.1.mrna1;Target=FBgn0037621.1 654 788 +
Chr2	stalkie_big_nohaplotig	CDS	78351790	78352319	.	-	0	Parent=FBgn0037621.1.mrna1;Target=FBgn0037621.1 124 653 +
Chr2	stalkie_big_nohaplotig	CDS	78352381	78352503	.	-	0	Parent=FBgn0037621.1.mrna1;Target=FBgn0037621.1 1 123 +
Chr2	gffcl	locus	78359754	78360939	.	+	.	ID=RLOC_00018725;geneIDs=FBgn0037652.1.path1;transcripts=FBgn0037652.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78359754	78360939	.	+	.	ID=FBgn0037652.1.mrna1;geneID=FBgn0037652.1.path1;Name=FBgn0037652.1;Dir=sensecoverage=100.0;identity=99.9;matches=1127;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018725
Chr2	stalkie_big_nohaplotig	exon	78359754	78360142	100	+	.	Parent=FBgn0037652.1.mrna1;Target=FBgn0037652.1 1 389 +
Chr2	stalkie_big_nohaplotig	exon	78360201	78360939	99	+	.	Parent=FBgn0037652.1.mrna1;Target=FBgn0037652.1 390 1128 +
Chr2	stalkie_big_nohaplotig	CDS	78359754	78360142	.	+	0	Parent=FBgn0037652.1.mrna1;Target=FBgn0037652.1 1 389 +
Chr2	stalkie_big_nohaplotig	CDS	78360201	78360939	.	+	1	Parent=FBgn0037652.1.mrna1;Target=FBgn0037652.1 390 1128 +
Chr2	gffcl	locus	78361132	78361764	.	-	.	ID=RLOC_00018726;geneIDs=FBgn0026380.2.path1;transcripts=FBgn0026380.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78361132	78361764	.	-	.	ID=FBgn0026380.2.mrna1;geneID=FBgn0026380.2.path1;Name=FBgn0026380.2;Dir=indeterminatecoverage=100.0;identity=99.7;matches=631;mismatches=2;indels=0;unknowns=0;Target=FBgn0026380.2 633 1 .;locus=RLOC_00018726
Chr2	stalkie_big_nohaplotig	exon	78361132	78361764	99	-	.	Parent=FBgn0026380.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78361132	78361764	.	-	0	Parent=FBgn0026380.2.mrna1
Chr2	gffcl	locus	78367728	78368819	.	+	.	ID=RLOC_00018728;geneIDs=FBgn0037653.1.path1;transcripts=FBgn0037653.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78367728	78368819	.	+	.	ID=FBgn0037653.1.mrna1;geneID=FBgn0037653.1.path1;Name=FBgn0037653.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1091;mismatches=1;indels=0;unknowns=0;Target=FBgn0037653.1 1092 1 .;locus=RLOC_00018728
Chr2	stalkie_big_nohaplotig	exon	78367728	78368819	99	+	.	Parent=FBgn0037653.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78367728	78368819	.	+	0	Parent=FBgn0037653.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79252316	79253146	.	-	.	ID=comp146124_c0_seq1.mrna1;geneID=comp146124_c0_seq1.path1;Name=comp146124_c0_seq1;Dir=indeterminatecoverage=97.4;identity=93.8;matches=796;mismatches=26;indels=27;unknowns=0;Target=comp146124_c0_seq1 840 1 .;CDS_Target=comp146124_c0_seq1 721 605 .;locus=RLOC_00018729
Chr2	stalkie_big_nohaplotig	exon	79252316	79253146	93	-	.	Parent=comp146124_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	79252435	79252551	.	-	0	Parent=comp146124_c0_seq1.mrna1
Chr2	gffcl	locus	78388912	78390394	.	-	.	ID=RLOC_00018731;geneIDs=FBgn0037656.1.path1;transcripts=FBgn0037656.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78388912	78390394	.	-	.	ID=FBgn0037656.1.mrna1;geneID=FBgn0037656.1.path1;Name=FBgn0037656.1;Dir=sensecoverage=100.0;identity=99.6;matches=1335;mismatches=6;indels=0;unknowns=0;locus=RLOC_00018731
Chr2	stalkie_big_nohaplotig	exon	78388912	78389322	99	-	.	Parent=FBgn0037656.1.mrna1;Target=FBgn0037656.1 931 1341 +
Chr2	stalkie_big_nohaplotig	exon	78389379	78390090	99	-	.	Parent=FBgn0037656.1.mrna1;Target=FBgn0037656.1 219 930 +
Chr2	stalkie_big_nohaplotig	exon	78390177	78390394	99	-	.	Parent=FBgn0037656.1.mrna1;Target=FBgn0037656.1 1 218 +
Chr2	stalkie_big_nohaplotig	CDS	78388912	78389322	.	-	0	Parent=FBgn0037656.1.mrna1;Target=FBgn0037656.1 931 1341 +
Chr2	stalkie_big_nohaplotig	CDS	78389379	78390090	.	-	1	Parent=FBgn0037656.1.mrna1;Target=FBgn0037656.1 219 930 +
Chr2	stalkie_big_nohaplotig	CDS	78390177	78390394	.	-	0	Parent=FBgn0037656.1.mrna1;Target=FBgn0037656.1 1 218 +
Chr2	gffcl	locus	78390548	78390829	.	+	.	ID=RLOC_00018732;geneIDs=FBgn0040534.1.path1;transcripts=FBgn0040534.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78390548	78390829	.	+	.	ID=FBgn0040534.1.mrna1;geneID=FBgn0040534.1.path1;Name=FBgn0040534.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=282;mismatches=0;indels=0;unknowns=0;Target=FBgn0040534.1 282 1 .;locus=RLOC_00018732
Chr2	stalkie_big_nohaplotig	exon	78390548	78390829	100	+	.	Parent=FBgn0040534.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78390548	78390829	.	+	0	Parent=FBgn0040534.1.mrna1
Chr2	gffcl	locus	78393676	78395598	.	-	.	ID=RLOC_00018733;geneIDs=FBgn0264075.1.path1;transcripts=FBgn0264075.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78393676	78395598	.	-	.	ID=FBgn0264075.1.mrna1;geneID=FBgn0264075.1.path1;Name=FBgn0264075.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1921;mismatches=2;indels=0;unknowns=0;Target=FBgn0264075.1 1923 1 .;locus=RLOC_00018733
Chr2	stalkie_big_nohaplotig	exon	78393676	78395598	99	-	.	Parent=FBgn0264075.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78393676	78395598	.	-	0	Parent=FBgn0264075.1.mrna1
Chr2	gffcl	locus	78395699	78414060	.	-	.	ID=RLOC_00018734;geneIDs=comp140048_c0_seq1.path1;transcripts=comp140048_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78395699	78414060	.	-	.	ID=comp140048_c0_seq1.mrna1;geneID=comp140048_c0_seq1.path1;Name=comp140048_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=316;mismatches=1;indels=0;unknowns=0;Target=comp140048_c0_seq1 233 316 .;locus=RLOC_00018734
Chr2	stalkie_big_nohaplotig	exon	78395699	78395722	100	-	.	Parent=comp140048_c0_seq1.mrna1;Target=comp140048_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	exon	78401499	78401642	99	-	.	Parent=comp140048_c0_seq1.mrna1;Target=comp140048_c0_seq1 25 168 -
Chr2	stalkie_big_nohaplotig	exon	78413912	78414060	100	-	.	Parent=comp140048_c0_seq1.mrna1;Target=comp140048_c0_seq1 169 317 -
Chr2	stalkie_big_nohaplotig	CDS	78413976	78414059	.	-	0	Parent=comp140048_c0_seq1.mrna1
Chr2	gffcl	locus	78402691	78404480	.	+	.	ID=RLOC_00018736;geneIDs=comp145828_c0_seq1.path1;transcripts=comp145828_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78402691	78404480	.	+	.	ID=comp145828_c0_seq1.mrna1;geneID=comp145828_c0_seq1.path1;Name=comp145828_c0_seq1;Dir=sensecoverage=95.6;identity=99.6;matches=1172;mismatches=2;indels=3;unknowns=0;locus=RLOC_00018736
Chr2	stalkie_big_nohaplotig	exon	78402691	78402787	100	+	.	Parent=comp145828_c0_seq1.mrna1;Target=comp145828_c0_seq1 1 97 +
Chr2	stalkie_big_nohaplotig	exon	78403229	78403719	100	+	.	Parent=comp145828_c0_seq1.mrna1;Target=comp145828_c0_seq1 98 588 +
Chr2	stalkie_big_nohaplotig	exon	78403779	78403913	98	+	.	Parent=comp145828_c0_seq1.mrna1;Target=comp145828_c0_seq1 589 724 +
Chr2	stalkie_big_nohaplotig	exon	78403973	78404083	99	+	.	Parent=comp145828_c0_seq1.mrna1;Target=comp145828_c0_seq1 725 835 +
Chr2	stalkie_big_nohaplotig	exon	78404139	78404480	99	+	.	Parent=comp145828_c0_seq1.mrna1;Target=comp145828_c0_seq1 836 1175 +
Chr2	stalkie_big_nohaplotig	CDS	78402692	78402787	.	+	0	Parent=comp145828_c0_seq1.mrna1;Target=comp145828_c0_seq1 2 97 +
Chr2	stalkie_big_nohaplotig	CDS	78403229	78403719	.	+	0	Parent=comp145828_c0_seq1.mrna1;Target=comp145828_c0_seq1 98 588 +
Chr2	stalkie_big_nohaplotig	CDS	78403779	78403889	.	+	1	Parent=comp145828_c0_seq1.mrna1;Target=comp145828_c0_seq1 589 700 +
Chr2	gffcl	locus	78404964	78406249	.	+	.	ID=RLOC_00018737;geneIDs=FBgn0037619.1.path1;transcripts=FBgn0037619.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78404964	78406249	.	+	.	ID=FBgn0037619.1.mrna1;geneID=FBgn0037619.1.path1;Name=FBgn0037619.1;Dir=sensecoverage=100.0;identity=100.0;matches=1044;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018737
Chr2	stalkie_big_nohaplotig	exon	78404964	78405161	100	+	.	Parent=FBgn0037619.1.mrna1;Target=FBgn0037619.1 1 198 +
Chr2	stalkie_big_nohaplotig	exon	78405244	78405740	100	+	.	Parent=FBgn0037619.1.mrna1;Target=FBgn0037619.1 199 695 +
Chr2	stalkie_big_nohaplotig	exon	78405797	78405931	100	+	.	Parent=FBgn0037619.1.mrna1;Target=FBgn0037619.1 696 830 +
Chr2	stalkie_big_nohaplotig	exon	78405984	78406094	100	+	.	Parent=FBgn0037619.1.mrna1;Target=FBgn0037619.1 831 941 +
Chr2	stalkie_big_nohaplotig	exon	78406147	78406249	100	+	.	Parent=FBgn0037619.1.mrna1;Target=FBgn0037619.1 942 1044 +
Chr2	stalkie_big_nohaplotig	CDS	78404964	78405161	.	+	0	Parent=FBgn0037619.1.mrna1;Target=FBgn0037619.1 1 198 +
Chr2	stalkie_big_nohaplotig	CDS	78405244	78405740	.	+	0	Parent=FBgn0037619.1.mrna1;Target=FBgn0037619.1 199 695 +
Chr2	stalkie_big_nohaplotig	CDS	78405797	78405931	.	+	1	Parent=FBgn0037619.1.mrna1;Target=FBgn0037619.1 696 830 +
Chr2	stalkie_big_nohaplotig	CDS	78405984	78406094	.	+	1	Parent=FBgn0037619.1.mrna1;Target=FBgn0037619.1 831 941 +
Chr2	stalkie_big_nohaplotig	CDS	78406147	78406249	.	+	1	Parent=FBgn0037619.1.mrna1;Target=FBgn0037619.1 942 1044 +
Chr2	gffcl	locus	78412521	78413783	.	+	.	ID=RLOC_00018738;geneIDs=FBgn0037619.3.path1;transcripts=FBgn0037619.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78412521	78413783	.	+	.	ID=FBgn0037619.3.mrna1;geneID=FBgn0037619.3.path1;Name=FBgn0037619.3;Dir=sensecoverage=100.0;identity=99.9;matches=1010;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018738
Chr2	stalkie_big_nohaplotig	exon	78412521	78412649	100	+	.	Parent=FBgn0037619.3.mrna1;Target=FBgn0037619.3 1 129 +
Chr2	stalkie_big_nohaplotig	exon	78412722	78413245	99	+	.	Parent=FBgn0037619.3.mrna1;Target=FBgn0037619.3 130 653 +
Chr2	stalkie_big_nohaplotig	exon	78413311	78413445	100	+	.	Parent=FBgn0037619.3.mrna1;Target=FBgn0037619.3 654 788 +
Chr2	stalkie_big_nohaplotig	exon	78413502	78413615	100	+	.	Parent=FBgn0037619.3.mrna1;Target=FBgn0037619.3 789 902 +
Chr2	stalkie_big_nohaplotig	exon	78413675	78413783	100	+	.	Parent=FBgn0037619.3.mrna1;Target=FBgn0037619.3 903 1011 +
Chr2	stalkie_big_nohaplotig	CDS	78412521	78412649	.	+	0	Parent=FBgn0037619.3.mrna1;Target=FBgn0037619.3 1 129 +
Chr2	stalkie_big_nohaplotig	CDS	78412722	78413245	.	+	0	Parent=FBgn0037619.3.mrna1;Target=FBgn0037619.3 130 653 +
Chr2	stalkie_big_nohaplotig	CDS	78413311	78413445	.	+	1	Parent=FBgn0037619.3.mrna1;Target=FBgn0037619.3 654 788 +
Chr2	stalkie_big_nohaplotig	CDS	78413502	78413615	.	+	1	Parent=FBgn0037619.3.mrna1;Target=FBgn0037619.3 789 902 +
Chr2	stalkie_big_nohaplotig	CDS	78413675	78413783	.	+	1	Parent=FBgn0037619.3.mrna1;Target=FBgn0037619.3 903 1011 +
Chr2	gffcl	locus	78428628	78440702	.	+	.	ID=RLOC_00018739;geneIDs=FBgn0051100.1.path1,comp116699_c0_seq1.path1;transcripts=comp116699_c0_seq1.mrna1,FBgn0051100.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78428628	78434182	.	+	.	ID=comp116699_c0_seq1.mrna1;geneID=comp116699_c0_seq1.path1;Name=comp116699_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=437;mismatches=0;indels=0;unknowns=0;Target=comp116699_c0_seq1 108 221 +;locus=RLOC_00018739
Chr2	stalkie_big_nohaplotig	exon	78428628	78429040	100	+	.	Parent=comp116699_c0_seq1.mrna1;Target=comp116699_c0_seq1 1 413 +
Chr2	stalkie_big_nohaplotig	exon	78434159	78434182	100	+	.	Parent=comp116699_c0_seq1.mrna1;Target=comp116699_c0_seq1 414 437 +
Chr2	stalkie_big_nohaplotig	CDS	78428735	78428848	.	+	0	Parent=comp116699_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78434002	78440702	.	+	.	ID=FBgn0051100.1.mrna1;geneID=FBgn0051100.1.path1;Name=FBgn0051100.1;Dir=sensecoverage=100.0;identity=99.6;matches=2238;mismatches=9;indels=0;unknowns=0;locus=RLOC_00018739
Chr2	stalkie_big_nohaplotig	exon	78434002	78434036	97	+	.	Parent=FBgn0051100.1.mrna1;Target=FBgn0051100.1 1 35 +
Chr2	stalkie_big_nohaplotig	exon	78434159	78434292	100	+	.	Parent=FBgn0051100.1.mrna1;Target=FBgn0051100.1 36 169 +
Chr2	stalkie_big_nohaplotig	exon	78434373	78434483	100	+	.	Parent=FBgn0051100.1.mrna1;Target=FBgn0051100.1 170 280 +
Chr2	stalkie_big_nohaplotig	exon	78434548	78434633	98	+	.	Parent=FBgn0051100.1.mrna1;Target=FBgn0051100.1 281 366 +
Chr2	stalkie_big_nohaplotig	exon	78436543	78436659	100	+	.	Parent=FBgn0051100.1.mrna1;Target=FBgn0051100.1 367 483 +
Chr2	stalkie_big_nohaplotig	exon	78438732	78439226	99	+	.	Parent=FBgn0051100.1.mrna1;Target=FBgn0051100.1 484 978 +
Chr2	stalkie_big_nohaplotig	exon	78439295	78440329	99	+	.	Parent=FBgn0051100.1.mrna1;Target=FBgn0051100.1 979 2013 +
Chr2	stalkie_big_nohaplotig	exon	78440469	78440702	99	+	.	Parent=FBgn0051100.1.mrna1;Target=FBgn0051100.1 2014 2247 +
Chr2	stalkie_big_nohaplotig	CDS	78434002	78434036	.	+	0	Parent=FBgn0051100.1.mrna1;Target=FBgn0051100.1 1 35 +
Chr2	stalkie_big_nohaplotig	CDS	78434159	78434292	.	+	1	Parent=FBgn0051100.1.mrna1;Target=FBgn0051100.1 36 169 +
Chr2	stalkie_big_nohaplotig	CDS	78434373	78434483	.	+	2	Parent=FBgn0051100.1.mrna1;Target=FBgn0051100.1 170 280 +
Chr2	stalkie_big_nohaplotig	CDS	78434548	78434633	.	+	2	Parent=FBgn0051100.1.mrna1;Target=FBgn0051100.1 281 366 +
Chr2	stalkie_big_nohaplotig	CDS	78436543	78436659	.	+	0	Parent=FBgn0051100.1.mrna1;Target=FBgn0051100.1 367 483 +
Chr2	stalkie_big_nohaplotig	CDS	78438732	78439226	.	+	0	Parent=FBgn0051100.1.mrna1;Target=FBgn0051100.1 484 978 +
Chr2	stalkie_big_nohaplotig	CDS	78439295	78440329	.	+	0	Parent=FBgn0051100.1.mrna1;Target=FBgn0051100.1 979 2013 +
Chr2	stalkie_big_nohaplotig	CDS	78440469	78440702	.	+	0	Parent=FBgn0051100.1.mrna1;Target=FBgn0051100.1 2014 2247 +
Chr2	gffcl	locus	78433013	78433919	.	+	.	ID=RLOC_00018740;geneIDs=comp147244_c0_seq1.path1;transcripts=comp147244_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78433013	78433919	.	+	.	ID=comp147244_c0_seq1.mrna1;geneID=comp147244_c0_seq1.path1;Name=comp147244_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=902;mismatches=5;indels=2;unknowns=0;Target=comp147244_c0_seq1 909 1 .;CDS_Target=comp147244_c0_seq1 465 241 .;locus=RLOC_00018740
Chr2	stalkie_big_nohaplotig	exon	78433013	78433919	99	+	.	Parent=comp147244_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78433253	78433477	.	+	0	Parent=comp147244_c0_seq1.mrna1
Chr2	gffcl	locus	78451092	78452190	.	-	.	ID=RLOC_00018741;geneIDs=comp157302_c2_seq1.path1;transcripts=comp157302_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78451092	78452190	.	-	.	ID=comp157302_c2_seq1.mrna1;geneID=comp157302_c2_seq1.path1;Name=comp157302_c2_seq1;Dir=indeterminatecoverage=89.9;identity=95.0;matches=1051;mismatches=16;indels=39;unknowns=0;Target=comp157302_c2_seq1 1187 114 .;CDS_Target=comp157302_c2_seq1 930 781 .;locus=RLOC_00018741
Chr2	stalkie_big_nohaplotig	exon	78451092	78452190	95	-	.	Parent=comp157302_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78451381	78451530	.	-	0	Parent=comp157302_c2_seq1.mrna1
Chr2	gffcl	locus	78458256	78458813	.	+	.	ID=RLOC_00018744;geneIDs=comp120662_c0_seq1.path1;transcripts=comp120662_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78458256	78458813	.	+	.	ID=comp120662_c0_seq1.mrna1;geneID=comp120662_c0_seq1.path1;Name=comp120662_c0_seq1;Dir=indeterminatecoverage=94.4;identity=98.6;matches=551;mismatches=7;indels=1;unknowns=0;Target=comp120662_c0_seq1 592 34 .;CDS_Target=comp120662_c0_seq1 591 502 .;locus=RLOC_00018744
Chr2	stalkie_big_nohaplotig	exon	78458256	78458813	98	+	.	Parent=comp120662_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78458723	78458812	.	+	0	Parent=comp120662_c0_seq1.mrna1
Chr2	gffcl	locus	78460950	78466029	.	+	.	ID=RLOC_00018745;geneIDs=FBgn0027503.1.path1;transcripts=FBgn0027503.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78460950	78466029	.	+	.	ID=FBgn0027503.1.mrna1;geneID=FBgn0027503.1.path1;Name=FBgn0027503.1;Dir=sensecoverage=100.0;identity=99.9;matches=4459;mismatches=5;indels=0;unknowns=0;locus=RLOC_00018745
Chr2	stalkie_big_nohaplotig	exon	78460950	78461978	99	+	.	Parent=FBgn0027503.1.mrna1;Target=FBgn0027503.1 1 1029 +
Chr2	stalkie_big_nohaplotig	exon	78462040	78465034	99	+	.	Parent=FBgn0027503.1.mrna1;Target=FBgn0027503.1 1030 4024 +
Chr2	stalkie_big_nohaplotig	exon	78465590	78466029	100	+	.	Parent=FBgn0027503.1.mrna1;Target=FBgn0027503.1 4025 4464 +
Chr2	stalkie_big_nohaplotig	CDS	78460950	78461978	.	+	0	Parent=FBgn0027503.1.mrna1;Target=FBgn0027503.1 1 1029 +
Chr2	stalkie_big_nohaplotig	CDS	78462040	78465034	.	+	0	Parent=FBgn0027503.1.mrna1;Target=FBgn0027503.1 1030 4024 +
Chr2	stalkie_big_nohaplotig	CDS	78465590	78466029	.	+	2	Parent=FBgn0027503.1.mrna1;Target=FBgn0027503.1 4025 4464 +
Chr2	gffcl	locus	78512224	78513246	.	+	.	ID=RLOC_00018746;geneIDs=ORF1696.path1;transcripts=ORF1696.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78512224	78513246	.	+	.	ID=ORF1696.mrna1;geneID=ORF1696.path1;Name=ORF1696;Dir=indeterminatecoverage=100.0;identity=98.2;matches=1005;mismatches=18;indels=0;unknowns=0;Target=ORF1696 1023 1 .;locus=RLOC_00018746
Chr2	stalkie_big_nohaplotig	exon	78512224	78513246	98	+	.	Parent=ORF1696.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78512224	78513246	.	+	0	Parent=ORF1696.mrna1
Chr2	gffcl	locus	78514301	78516225	.	.	.	ID=RLOC_00018747;geneIDs=comp127415_c0_seq1.path1,comp153690_c0_seq1.path1;transcripts=comp127415_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78514920	78516225	.	+	.	ID=comp127415_c0_seq1.mrna1;geneID=comp127415_c0_seq1.path1;Name=comp127415_c0_seq1;Dir=indeterminatecoverage=94.2;identity=99.8;matches=1306;mismatches=0;indels=2;unknowns=0;Target=comp127415_c0_seq1 1328 21 .;CDS_Target=comp127415_c0_seq1 145 23 .;locus=RLOC_00018747
Chr2	stalkie_big_nohaplotig	exon	78514920	78516225	99	+	.	Parent=comp127415_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78514922	78515044	.	+	0	Parent=comp127415_c0_seq1.mrna1
Chr2	gffcl	locus	78516552	78519501	.	-	.	ID=RLOC_00018748;geneIDs=FBgn0015324.1.path1;transcripts=FBgn0015324.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78516552	78519501	.	-	.	ID=FBgn0015324.1.mrna1;geneID=FBgn0015324.1.path1;Name=FBgn0015324.1;Dir=sensecoverage=100.0;identity=100.0;matches=696;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018748
Chr2	stalkie_big_nohaplotig	exon	78516552	78516656	100	-	.	Parent=FBgn0015324.1.mrna1;Target=FBgn0015324.1 592 696 +
Chr2	stalkie_big_nohaplotig	exon	78517902	78518228	100	-	.	Parent=FBgn0015324.1.mrna1;Target=FBgn0015324.1 265 591 +
Chr2	stalkie_big_nohaplotig	exon	78518291	78518503	100	-	.	Parent=FBgn0015324.1.mrna1;Target=FBgn0015324.1 52 264 +
Chr2	stalkie_big_nohaplotig	exon	78519451	78519501	100	-	.	Parent=FBgn0015324.1.mrna1;Target=FBgn0015324.1 1 51 +
Chr2	stalkie_big_nohaplotig	CDS	78516552	78516656	.	-	0	Parent=FBgn0015324.1.mrna1;Target=FBgn0015324.1 592 696 +
Chr2	stalkie_big_nohaplotig	CDS	78517902	78518228	.	-	0	Parent=FBgn0015324.1.mrna1;Target=FBgn0015324.1 265 591 +
Chr2	stalkie_big_nohaplotig	CDS	78518291	78518503	.	-	0	Parent=FBgn0015324.1.mrna1;Target=FBgn0015324.1 52 264 +
Chr2	stalkie_big_nohaplotig	CDS	78519451	78519501	.	-	0	Parent=FBgn0015324.1.mrna1;Target=FBgn0015324.1 1 51 +
Chr2	gffcl	locus	78538595	78545441	.	+	.	ID=RLOC_00018749;geneIDs=FBgn0017550.1.path1;transcripts=FBgn0017550.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78538595	78545441	.	+	.	ID=FBgn0017550.1.mrna1;geneID=FBgn0017550.1.path1;Name=FBgn0017550.1;Dir=sensecoverage=100.0;identity=99.9;matches=1442;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018749
Chr2	stalkie_big_nohaplotig	exon	78538595	78538730	100	+	.	Parent=FBgn0017550.1.mrna1;Target=FBgn0017550.1 1 136 +
Chr2	stalkie_big_nohaplotig	exon	78538807	78538973	100	+	.	Parent=FBgn0017550.1.mrna1;Target=FBgn0017550.1 137 303 +
Chr2	stalkie_big_nohaplotig	exon	78540791	78541037	100	+	.	Parent=FBgn0017550.1.mrna1;Target=FBgn0017550.1 304 550 +
Chr2	stalkie_big_nohaplotig	exon	78541608	78541907	99	+	.	Parent=FBgn0017550.1.mrna1;Target=FBgn0017550.1 551 850 +
Chr2	stalkie_big_nohaplotig	exon	78541980	78542184	100	+	.	Parent=FBgn0017550.1.mrna1;Target=FBgn0017550.1 851 1055 +
Chr2	stalkie_big_nohaplotig	exon	78544974	78545138	100	+	.	Parent=FBgn0017550.1.mrna1;Target=FBgn0017550.1 1056 1220 +
Chr2	stalkie_big_nohaplotig	exon	78545219	78545441	100	+	.	Parent=FBgn0017550.1.mrna1;Target=FBgn0017550.1 1221 1443 +
Chr2	stalkie_big_nohaplotig	CDS	78538595	78538730	.	+	0	Parent=FBgn0017550.1.mrna1;Target=FBgn0017550.1 1 136 +
Chr2	stalkie_big_nohaplotig	CDS	78538807	78538973	.	+	2	Parent=FBgn0017550.1.mrna1;Target=FBgn0017550.1 137 303 +
Chr2	stalkie_big_nohaplotig	CDS	78540791	78541037	.	+	0	Parent=FBgn0017550.1.mrna1;Target=FBgn0017550.1 304 550 +
Chr2	stalkie_big_nohaplotig	CDS	78541608	78541907	.	+	2	Parent=FBgn0017550.1.mrna1;Target=FBgn0017550.1 551 850 +
Chr2	stalkie_big_nohaplotig	CDS	78541980	78542184	.	+	2	Parent=FBgn0017550.1.mrna1;Target=FBgn0017550.1 851 1055 +
Chr2	stalkie_big_nohaplotig	CDS	78544974	78545138	.	+	1	Parent=FBgn0017550.1.mrna1;Target=FBgn0017550.1 1056 1220 +
Chr2	stalkie_big_nohaplotig	CDS	78545219	78545441	.	+	1	Parent=FBgn0017550.1.mrna1;Target=FBgn0017550.1 1221 1443 +
Chr2	gffcl	locus	78548352	78553361	.	+	.	ID=RLOC_00018750;geneIDs=FBgn0261004.1.path1;transcripts=FBgn0261004.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78548352	78553361	.	+	.	ID=FBgn0261004.1.mrna1;geneID=FBgn0261004.1.path1;Name=FBgn0261004.1;Dir=sensecoverage=99.7;identity=99.7;matches=3027;mismatches=9;indels=1;unknowns=0;locus=RLOC_00018750
Chr2	stalkie_big_nohaplotig	exon	78548352	78548495	98	+	.	Parent=FBgn0261004.1.mrna1;Target=FBgn0261004.1 9 153 +
Chr2	stalkie_big_nohaplotig	exon	78549055	78549858	99	+	.	Parent=FBgn0261004.1.mrna1;Target=FBgn0261004.1 154 957 +
Chr2	stalkie_big_nohaplotig	exon	78549928	78551043	99	+	.	Parent=FBgn0261004.1.mrna1;Target=FBgn0261004.1 958 2073 +
Chr2	stalkie_big_nohaplotig	exon	78551113	78551940	99	+	.	Parent=FBgn0261004.1.mrna1;Target=FBgn0261004.1 2074 2901 +
Chr2	stalkie_big_nohaplotig	exon	78552087	78552206	100	+	.	Parent=FBgn0261004.1.mrna1;Target=FBgn0261004.1 2902 3021 +
Chr2	stalkie_big_nohaplotig	exon	78553338	78553361	100	+	.	Parent=FBgn0261004.1.mrna1;Target=FBgn0261004.1 3022 3045 +
Chr2	stalkie_big_nohaplotig	CDS	78548379	78548495	.	+	0	Parent=FBgn0261004.1.mrna1;Target=FBgn0261004.1 37 153 +
Chr2	stalkie_big_nohaplotig	CDS	78549055	78549858	.	+	0	Parent=FBgn0261004.1.mrna1;Target=FBgn0261004.1 154 957 +
Chr2	stalkie_big_nohaplotig	CDS	78549928	78551043	.	+	0	Parent=FBgn0261004.1.mrna1;Target=FBgn0261004.1 958 2073 +
Chr2	stalkie_big_nohaplotig	CDS	78551113	78551940	.	+	0	Parent=FBgn0261004.1.mrna1;Target=FBgn0261004.1 2074 2901 +
Chr2	stalkie_big_nohaplotig	CDS	78552087	78552206	.	+	0	Parent=FBgn0261004.1.mrna1;Target=FBgn0261004.1 2902 3021 +
Chr2	stalkie_big_nohaplotig	CDS	78553338	78553361	.	+	0	Parent=FBgn0261004.1.mrna1;Target=FBgn0261004.1 3022 3045 +
Chr2	gffcl	locus	78579172	80419292	.	-	.	ID=RLOC_00018751;geneIDs=comp149366_c1_seq1.path1;transcripts=comp149366_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78579172	80419292	.	-	.	ID=comp149366_c1_seq1.mrna1;geneID=comp149366_c1_seq1.path1;Name=comp149366_c1_seq1;Dir=indeterminatecoverage=72.7;identity=99.7;matches=343;mismatches=0;indels=1;unknowns=0;Target=comp149366_c1_seq1 230 159 .;locus=RLOC_00018751
Chr2	stalkie_big_nohaplotig	exon	78579172	78579173	100	-	.	Parent=comp149366_c1_seq1.mrna1;Target=comp149366_c1_seq1 344 343 .
Chr2	stalkie_big_nohaplotig	exon	78582666	78582672	100	-	.	Parent=comp149366_c1_seq1.mrna1;Target=comp149366_c1_seq1 342 336 .
Chr2	stalkie_big_nohaplotig	exon	78583933	78583936	100	-	.	Parent=comp149366_c1_seq1.mrna1;Target=comp149366_c1_seq1 335 332 .
Chr2	stalkie_big_nohaplotig	exon	78589942	78589949	100	-	.	Parent=comp149366_c1_seq1.mrna1;Target=comp149366_c1_seq1 331 324 .
Chr2	stalkie_big_nohaplotig	exon	78592058	78592065	100	-	.	Parent=comp149366_c1_seq1.mrna1;Target=comp149366_c1_seq1 323 316 .
Chr2	stalkie_big_nohaplotig	exon	80418979	80419292	99	-	.	Parent=comp149366_c1_seq1.mrna1;Target=comp149366_c1_seq1 315 1 .
Chr2	stalkie_big_nohaplotig	CDS	80419064	80419135	.	-	0	Parent=comp149366_c1_seq1.mrna1
Chr2	gffcl	locus	78595040	78596736	.	+	.	ID=RLOC_00018752;geneIDs=FBgn0037347.1.path1;transcripts=FBgn0037347.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78595040	78596736	.	+	.	ID=FBgn0037347.1.mrna1;geneID=FBgn0037347.1.path1;Name=FBgn0037347.1;Dir=sensecoverage=100.0;identity=99.4;matches=1383;mismatches=9;indels=0;unknowns=0;locus=RLOC_00018752
Chr2	stalkie_big_nohaplotig	exon	78595040	78595153	100	+	.	Parent=FBgn0037347.1.mrna1;Target=FBgn0037347.1 1 114 +
Chr2	stalkie_big_nohaplotig	exon	78595270	78595399	100	+	.	Parent=FBgn0037347.1.mrna1;Target=FBgn0037347.1 115 244 +
Chr2	stalkie_big_nohaplotig	exon	78595462	78596154	99	+	.	Parent=FBgn0037347.1.mrna1;Target=FBgn0037347.1 245 937 +
Chr2	stalkie_big_nohaplotig	exon	78596214	78596531	99	+	.	Parent=FBgn0037347.1.mrna1;Target=FBgn0037347.1 938 1255 +
Chr2	stalkie_big_nohaplotig	exon	78596600	78596736	99	+	.	Parent=FBgn0037347.1.mrna1;Target=FBgn0037347.1 1256 1392 +
Chr2	stalkie_big_nohaplotig	CDS	78595040	78595153	.	+	0	Parent=FBgn0037347.1.mrna1;Target=FBgn0037347.1 1 114 +
Chr2	stalkie_big_nohaplotig	CDS	78595270	78595399	.	+	0	Parent=FBgn0037347.1.mrna1;Target=FBgn0037347.1 115 244 +
Chr2	stalkie_big_nohaplotig	CDS	78595462	78596154	.	+	2	Parent=FBgn0037347.1.mrna1;Target=FBgn0037347.1 245 937 +
Chr2	stalkie_big_nohaplotig	CDS	78596214	78596531	.	+	2	Parent=FBgn0037347.1.mrna1;Target=FBgn0037347.1 938 1255 +
Chr2	stalkie_big_nohaplotig	CDS	78596600	78596736	.	+	2	Parent=FBgn0037347.1.mrna1;Target=FBgn0037347.1 1256 1392 +
Chr2	gffcl	locus	78603940	78607914	.	+	.	ID=RLOC_00018753;geneIDs=FBgn0039338.2.path1;transcripts=FBgn0039338.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78603940	78607914	.	+	.	ID=FBgn0039338.2.mrna1;geneID=FBgn0039338.2.path1;Name=FBgn0039338.2;Dir=sensecoverage=100.0;identity=99.9;matches=3822;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018753
Chr2	stalkie_big_nohaplotig	exon	78603940	78605833	100	+	.	Parent=FBgn0039338.2.mrna1;Target=FBgn0039338.2 1 1894 +
Chr2	stalkie_big_nohaplotig	exon	78605909	78606772	99	+	.	Parent=FBgn0039338.2.mrna1;Target=FBgn0039338.2 1895 2758 +
Chr2	stalkie_big_nohaplotig	exon	78606848	78607914	99	+	.	Parent=FBgn0039338.2.mrna1;Target=FBgn0039338.2 2759 3825 +
Chr2	stalkie_big_nohaplotig	CDS	78603940	78605833	.	+	0	Parent=FBgn0039338.2.mrna1;Target=FBgn0039338.2 1 1894 +
Chr2	stalkie_big_nohaplotig	CDS	78605909	78606772	.	+	2	Parent=FBgn0039338.2.mrna1;Target=FBgn0039338.2 1895 2758 +
Chr2	stalkie_big_nohaplotig	CDS	78606848	78607914	.	+	2	Parent=FBgn0039338.2.mrna1;Target=FBgn0039338.2 2759 3825 +
Chr2	gffcl	locus	78608492	78608988	.	-	.	ID=RLOC_00018754;geneIDs=FBgn0039337.1.path1;transcripts=FBgn0039337.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78608492	78608988	.	-	.	ID=FBgn0039337.1.mrna1;geneID=FBgn0039337.1.path1;Name=FBgn0039337.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=496;mismatches=1;indels=1;unknowns=0;Target=FBgn0039337.1 498 1 .;CDS_Target=FBgn0039337.1 71 3 .;locus=RLOC_00018754
Chr2	stalkie_big_nohaplotig	exon	78608492	78608988	99	-	.	Parent=FBgn0039337.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78608919	78608986	.	-	0	Parent=FBgn0039337.1.mrna1
Chr2	gffcl	locus	78618785	78621012	.	-	.	ID=RLOC_00018755;geneIDs=FBgn0000244.1.path1;transcripts=FBgn0000244.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78618785	78621012	.	-	.	ID=FBgn0000244.1.mrna1;geneID=FBgn0000244.1.path1;Name=FBgn0000244.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=2218;mismatches=10;indels=1;unknowns=0;Target=FBgn0000244.1 2229 1 .;locus=RLOC_00018755
Chr2	stalkie_big_nohaplotig	exon	78618785	78621012	99	-	.	Parent=FBgn0000244.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78618785	78621012	.	-	0	Parent=FBgn0000244.1.mrna1
Chr2	gffcl	locus	78631777	78655926	.	+	.	ID=RLOC_00018756;geneIDs=FBgn0037632.1.path1;transcripts=FBgn0037632.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78631777	78655926	.	+	.	ID=FBgn0037632.1.mrna1;geneID=FBgn0037632.1.path1;Name=FBgn0037632.1;Dir=sensecoverage=99.5;identity=99.6;matches=1621;mismatches=6;indels=0;unknowns=0;locus=RLOC_00018756
Chr2	stalkie_big_nohaplotig	exon	78631777	78632038	100	+	.	Parent=FBgn0037632.1.mrna1;Target=FBgn0037632.1 9 270 +
Chr2	stalkie_big_nohaplotig	exon	78632094	78632913	99	+	.	Parent=FBgn0037632.1.mrna1;Target=FBgn0037632.1 271 1090 +
Chr2	stalkie_big_nohaplotig	exon	78632977	78633111	99	+	.	Parent=FBgn0037632.1.mrna1;Target=FBgn0037632.1 1091 1225 +
Chr2	stalkie_big_nohaplotig	exon	78652454	78652642	100	+	.	Parent=FBgn0037632.1.mrna1;Target=FBgn0037632.1 1226 1414 +
Chr2	stalkie_big_nohaplotig	exon	78655706	78655926	99	+	.	Parent=FBgn0037632.1.mrna1;Target=FBgn0037632.1 1415 1635 +
Chr2	stalkie_big_nohaplotig	CDS	78631778	78632038	.	+	0	Parent=FBgn0037632.1.mrna1;Target=FBgn0037632.1 10 270 +
Chr2	stalkie_big_nohaplotig	CDS	78632094	78632913	.	+	0	Parent=FBgn0037632.1.mrna1;Target=FBgn0037632.1 271 1090 +
Chr2	stalkie_big_nohaplotig	CDS	78632977	78633111	.	+	2	Parent=FBgn0037632.1.mrna1;Target=FBgn0037632.1 1091 1225 +
Chr2	stalkie_big_nohaplotig	CDS	78652454	78652642	.	+	2	Parent=FBgn0037632.1.mrna1;Target=FBgn0037632.1 1226 1414 +
Chr2	stalkie_big_nohaplotig	CDS	78655706	78655926	.	+	2	Parent=FBgn0037632.1.mrna1;Target=FBgn0037632.1 1415 1635 +
Chr2	gffcl	locus	78639690	78640019	.	+	.	ID=RLOC_00018757;geneIDs=comp63090_c0_seq1.path1;transcripts=comp63090_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78639690	78640019	.	+	.	ID=comp63090_c0_seq1.mrna1;geneID=comp63090_c0_seq1.path1;Name=comp63090_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=329;mismatches=1;indels=0;unknowns=0;Target=comp63090_c0_seq1 331 2 .;CDS_Target=comp63090_c0_seq1 53 12 .;locus=RLOC_00018757
Chr2	stalkie_big_nohaplotig	exon	78639690	78640019	99	+	.	Parent=comp63090_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78639700	78639741	.	+	0	Parent=comp63090_c0_seq1.mrna1
Chr2	gffcl	locus	78660115	78662012	.	+	.	ID=RLOC_00018758;geneIDs=Dv_FBgn0210594.1.path1;transcripts=Dv_FBgn0210594.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78660115	78662012	.	+	.	ID=Dv_FBgn0210594.1.mrna1;geneID=Dv_FBgn0210594.1.path1;Name=Dv_FBgn0210594.1;Dir=sensecoverage=100.0;identity=99.7;matches=867;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018758
Chr2	stalkie_big_nohaplotig	exon	78660115	78660340	100	+	.	Parent=Dv_FBgn0210594.1.mrna1;Target=Dv_FBgn0210594.1 1 226 +
Chr2	stalkie_big_nohaplotig	exon	78661369	78662012	99	+	.	Parent=Dv_FBgn0210594.1.mrna1;Target=Dv_FBgn0210594.1 227 870 +
Chr2	stalkie_big_nohaplotig	CDS	78660115	78660340	.	+	0	Parent=Dv_FBgn0210594.1.mrna1;Target=Dv_FBgn0210594.1 1 226 +
Chr2	stalkie_big_nohaplotig	CDS	78661369	78662012	.	+	2	Parent=Dv_FBgn0210594.1.mrna1;Target=Dv_FBgn0210594.1 227 870 +
Chr2	gffcl	locus	78665177	78665986	.	+	.	ID=RLOC_00018759;geneIDs=ORF3266.path1;transcripts=ORF3266.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78665177	78665986	.	+	.	ID=ORF3266.mrna1;geneID=ORF3266.path1;Name=ORF3266;Dir=sensecoverage=100.0;identity=99.6;matches=747;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018759
Chr2	stalkie_big_nohaplotig	exon	78665177	78665257	100	+	.	Parent=ORF3266.mrna1;Target=ORF3266 1 81 +
Chr2	stalkie_big_nohaplotig	exon	78665318	78665986	99	+	.	Parent=ORF3266.mrna1;Target=ORF3266 82 750 +
Chr2	stalkie_big_nohaplotig	CDS	78665177	78665257	.	+	0	Parent=ORF3266.mrna1;Target=ORF3266 1 81 +
Chr2	stalkie_big_nohaplotig	CDS	78665318	78665986	.	+	0	Parent=ORF3266.mrna1;Target=ORF3266 82 750 +
Chr2	gffcl	locus	78710662	78711987	.	-	.	ID=RLOC_00018760;geneIDs=comp158118_c0_seq1.path1;transcripts=comp158118_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78710662	78711987	.	-	.	ID=comp158118_c0_seq1.mrna1;geneID=comp158118_c0_seq1.path1;Name=comp158118_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1326;mismatches=0;indels=0;unknowns=0;Target=comp158118_c0_seq1 1326 1 .;CDS_Target=comp158118_c0_seq1 914 723 .;locus=RLOC_00018760
Chr2	stalkie_big_nohaplotig	exon	78710662	78711987	100	-	.	Parent=comp158118_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78711074	78711265	.	-	0	Parent=comp158118_c0_seq1.mrna1
Chr2	gffcl	locus	78735840	78736479	.	+	.	ID=RLOC_00018761;geneIDs=comp147751_c0_seq1.path1;transcripts=comp147751_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78735840	78736479	.	+	.	ID=comp147751_c0_seq1.mrna1;geneID=comp147751_c0_seq1.path1;Name=comp147751_c0_seq1;Dir=indeterminatecoverage=100.0;identity=87.3;matches=578;mismatches=13;indels=71;unknowns=0;Target=comp147751_c0_seq1 613 1 .;CDS_Target=comp147751_c0_seq1 612 433 .;locus=RLOC_00018761
Chr2	stalkie_big_nohaplotig	exon	78735840	78736479	87	+	.	Parent=comp147751_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78736257	78736478	.	+	0	Parent=comp147751_c0_seq1.mrna1
Chr2	gffcl	locus	78737292	78738113	.	-	.	ID=RLOC_00018762;geneIDs=comp150743_c0_seq1.path1;transcripts=comp150743_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78737292	78738113	.	-	.	ID=comp150743_c0_seq1.mrna1;geneID=comp150743_c0_seq1.path1;Name=comp150743_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=819;mismatches=3;indels=0;unknowns=0;Target=comp150743_c0_seq1 822 1 .;CDS_Target=comp150743_c0_seq1 670 593 .;locus=RLOC_00018762
Chr2	stalkie_big_nohaplotig	exon	78737292	78738113	99	-	.	Parent=comp150743_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78737444	78737521	.	-	0	Parent=comp150743_c0_seq1.mrna1
Chr2	gffcl	locus	78738327	78738699	.	-	.	ID=RLOC_00018763;geneIDs=comp116754_c0_seq1.path1;transcripts=comp116754_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78738327	78738699	.	-	.	ID=comp116754_c0_seq1.mrna1;geneID=comp116754_c0_seq1.path1;Name=comp116754_c0_seq1;Dir=indeterminatecoverage=95.9;identity=99.7;matches=372;mismatches=1;indels=0;unknowns=0;Target=comp116754_c0_seq1 389 17 .;CDS_Target=comp116754_c0_seq1 304 197 .;locus=RLOC_00018763
Chr2	stalkie_big_nohaplotig	exon	78738327	78738699	99	-	.	Parent=comp116754_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78738412	78738519	.	-	0	Parent=comp116754_c0_seq1.mrna1
Chr2	gffcl	locus	78739282	78739977	.	-	.	ID=RLOC_00018764;geneIDs=comp150560_c1_seq1.path1;transcripts=comp150560_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78739282	78739977	.	-	.	ID=comp150560_c1_seq1.mrna1;geneID=comp150560_c1_seq1.path1;Name=comp150560_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=694;mismatches=2;indels=4;unknowns=0;Target=comp150560_c1_seq1 700 1 .;CDS_Target=comp150560_c1_seq1 298 140 .;locus=RLOC_00018764
Chr2	stalkie_big_nohaplotig	exon	78739282	78739977	99	-	.	Parent=comp150560_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78739680	78739838	.	-	0	Parent=comp150560_c1_seq1.mrna1
Chr2	gffcl	locus	78740323	78740794	.	-	.	ID=RLOC_00018765;geneIDs=comp147877_c3_seq1.path1;transcripts=comp147877_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78740323	78740794	.	-	.	ID=comp147877_c3_seq1.mrna1;geneID=comp147877_c3_seq1.path1;Name=comp147877_c3_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=466;mismatches=6;indels=0;unknowns=0;Target=comp147877_c3_seq1 472 1 .;CDS_Target=comp147877_c3_seq1 132 37 .;locus=RLOC_00018765
Chr2	stalkie_big_nohaplotig	exon	78740323	78740794	98	-	.	Parent=comp147877_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78740663	78740758	.	-	0	Parent=comp147877_c3_seq1.mrna1
Chr2	gffcl	locus	78751711	78753286	.	-	.	ID=RLOC_00018766;geneIDs=comp153023_c0_seq1.path1;transcripts=comp153023_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78751711	78753286	.	-	.	ID=comp153023_c0_seq1.mrna1;geneID=comp153023_c0_seq1.path1;Name=comp153023_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1568;mismatches=1;indels=7;unknowns=0;Target=comp153023_c0_seq1 1569 1 .;CDS_Target=comp153023_c0_seq1 1567 1373 .;locus=RLOC_00018766
Chr2	stalkie_big_nohaplotig	exon	78751711	78753286	99	-	.	Parent=comp153023_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78751713	78751907	.	-	0	Parent=comp153023_c0_seq1.mrna1
Chr2	gffcl	locus	78756117	78761887	.	-	.	ID=RLOC_00018767;geneIDs=Dv_FBgn0210827.1.path1,comp148531_c1_seq1.path2;transcripts=comp148531_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	78756117	78761887	.	-	.	ID=comp148531_c1_seq1.mrna2;geneID=comp148531_c1_seq1.path2;Name=comp148531_c1_seq1;Dir=sensecoverage=98.4;identity=99.5;matches=2969;mismatches=4;indels=10;unknowns=0;Target=comp148531_c1_seq1 1712 2689 +;locus=RLOC_00018767
Chr2	stalkie_big_nohaplotig	exon	78756117	78758135	99	-	.	Parent=comp148531_c1_seq1.mrna2;Target=comp148531_c1_seq1 1006 3022 +
Chr2	stalkie_big_nohaplotig	exon	78760928	78761887	100	-	.	Parent=comp148531_c1_seq1.mrna2;Target=comp148531_c1_seq1 46 1005 +
Chr2	stalkie_big_nohaplotig	CDS	78756455	78757429	.	-	0	Parent=comp148531_c1_seq1.mrna2
Chr2	gffcl	locus	78763441	78764176	.	.	.	ID=RLOC_00018768;geneIDs=comp118320_c0_seq1.path1,comp143887_c0_seq1.path1;transcripts=comp118320_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78763773	78764176	.	+	.	ID=comp118320_c0_seq1.mrna1;geneID=comp118320_c0_seq1.path1;Name=comp118320_c0_seq1;Dir=indeterminatecoverage=98.1;identity=100.0;matches=404;mismatches=0;indels=0;unknowns=0;Target=comp118320_c0_seq1 412 9 .;CDS_Target=comp118320_c0_seq1 64 11 .;locus=RLOC_00018768
Chr2	stalkie_big_nohaplotig	exon	78763773	78764176	100	+	.	Parent=comp118320_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78763775	78763828	.	+	0	Parent=comp118320_c0_seq1.mrna1
Chr2	gffcl	locus	78766080	78767281	.	+	.	ID=RLOC_00018769;geneIDs=comp159555_c0_seq1.path1;transcripts=comp159555_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78766080	78767281	.	+	.	ID=comp159555_c0_seq1.mrna1;geneID=comp159555_c0_seq1.path1;Name=comp159555_c0_seq1;Dir=indeterminatecoverage=45.9;identity=99.3;matches=1194;mismatches=8;indels=0;unknowns=0;Target=comp159555_c0_seq1 2621 1420 .;CDS_Target=comp159555_c0_seq1 2236 2015 .;locus=RLOC_00018769
Chr2	stalkie_big_nohaplotig	exon	78766080	78767281	99	+	.	Parent=comp159555_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78766675	78766896	.	+	0	Parent=comp159555_c0_seq1.mrna1
Chr2	gffcl	locus	78768084	78769215	.	-	.	ID=RLOC_00018770;geneIDs=comp143062_c0_seq1.path1;transcripts=comp143062_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78768084	78769215	.	-	.	ID=comp143062_c0_seq1.mrna1;geneID=comp143062_c0_seq1.path1;Name=comp143062_c0_seq1;Dir=indeterminatecoverage=96.4;identity=99.0;matches=1125;mismatches=2;indels=9;unknowns=0;Target=comp143062_c0_seq1 1172 42 .;CDS_Target=comp143062_c0_seq1 939 820 .;locus=RLOC_00018770
Chr2	stalkie_big_nohaplotig	exon	78768084	78769215	99	-	.	Parent=comp143062_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78768317	78768436	.	-	0	Parent=comp143062_c0_seq1.mrna1
Chr2	gffcl	locus	78771582	78790358	.	-	.	ID=RLOC_00018771;geneIDs=FBgn0037705.1.path1;transcripts=FBgn0037705.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78771582	78790358	.	-	.	ID=FBgn0037705.1.mrna1;geneID=FBgn0037705.1.path1;Name=FBgn0037705.1;Dir=sensecoverage=100.0;identity=99.8;matches=2654;mismatches=4;indels=0;unknowns=0;locus=RLOC_00018771
Chr2	stalkie_big_nohaplotig	exon	78771582	78771821	100	-	.	Parent=FBgn0037705.1.mrna1;Target=FBgn0037705.1 2419 2658 +
Chr2	stalkie_big_nohaplotig	exon	78772203	78772315	100	-	.	Parent=FBgn0037705.1.mrna1;Target=FBgn0037705.1 2306 2418 +
Chr2	stalkie_big_nohaplotig	exon	78773042	78773226	100	-	.	Parent=FBgn0037705.1.mrna1;Target=FBgn0037705.1 2121 2305 +
Chr2	stalkie_big_nohaplotig	exon	78773287	78773432	100	-	.	Parent=FBgn0037705.1.mrna1;Target=FBgn0037705.1 1975 2120 +
Chr2	stalkie_big_nohaplotig	exon	78773539	78774531	99	-	.	Parent=FBgn0037705.1.mrna1;Target=FBgn0037705.1 982 1974 +
Chr2	stalkie_big_nohaplotig	exon	78774598	78774978	99	-	.	Parent=FBgn0037705.1.mrna1;Target=FBgn0037705.1 601 981 +
Chr2	stalkie_big_nohaplotig	exon	78775110	78775449	100	-	.	Parent=FBgn0037705.1.mrna1;Target=FBgn0037705.1 261 600 +
Chr2	stalkie_big_nohaplotig	exon	78790099	78790358	99	-	.	Parent=FBgn0037705.1.mrna1;Target=FBgn0037705.1 1 260 +
Chr2	stalkie_big_nohaplotig	CDS	78771582	78771821	.	-	0	Parent=FBgn0037705.1.mrna1;Target=FBgn0037705.1 2419 2658 +
Chr2	stalkie_big_nohaplotig	CDS	78772203	78772315	.	-	2	Parent=FBgn0037705.1.mrna1;Target=FBgn0037705.1 2306 2418 +
Chr2	stalkie_big_nohaplotig	CDS	78773042	78773226	.	-	1	Parent=FBgn0037705.1.mrna1;Target=FBgn0037705.1 2121 2305 +
Chr2	stalkie_big_nohaplotig	CDS	78773287	78773432	.	-	0	Parent=FBgn0037705.1.mrna1;Target=FBgn0037705.1 1975 2120 +
Chr2	stalkie_big_nohaplotig	CDS	78773539	78774531	.	-	0	Parent=FBgn0037705.1.mrna1;Target=FBgn0037705.1 982 1974 +
Chr2	stalkie_big_nohaplotig	CDS	78774598	78774978	.	-	0	Parent=FBgn0037705.1.mrna1;Target=FBgn0037705.1 601 981 +
Chr2	stalkie_big_nohaplotig	CDS	78775110	78775449	.	-	1	Parent=FBgn0037705.1.mrna1;Target=FBgn0037705.1 261 600 +
Chr2	stalkie_big_nohaplotig	CDS	78790099	78790358	.	-	0	Parent=FBgn0037705.1.mrna1;Target=FBgn0037705.1 1 260 +
Chr2	gffcl	locus	78777133	78782569	.	-	.	ID=RLOC_00018772;geneIDs=comp155737_c0_seq1.path1;transcripts=comp155737_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78777133	78782569	.	-	.	ID=comp155737_c0_seq1.mrna1;geneID=comp155737_c0_seq1.path1;Name=comp155737_c0_seq1;Dir=indeterminatecoverage=92.5;identity=99.8;matches=1264;mismatches=2;indels=1;unknowns=0;Target=comp155737_c0_seq1 408 286 .;locus=RLOC_00018772
Chr2	stalkie_big_nohaplotig	exon	78777133	78778375	99	-	.	Parent=comp155737_c0_seq1.mrna1;Target=comp155737_c0_seq1 1369 126 .
Chr2	stalkie_big_nohaplotig	exon	78779501	78779508	100	-	.	Parent=comp155737_c0_seq1.mrna1;Target=comp155737_c0_seq1 125 118 .
Chr2	stalkie_big_nohaplotig	exon	78780022	78780025	100	-	.	Parent=comp155737_c0_seq1.mrna1;Target=comp155737_c0_seq1 117 114 .
Chr2	stalkie_big_nohaplotig	exon	78782559	78782569	100	-	.	Parent=comp155737_c0_seq1.mrna1;Target=comp155737_c0_seq1 113 103 .
Chr2	stalkie_big_nohaplotig	CDS	78778093	78778215	.	-	0	Parent=comp155737_c0_seq1.mrna1
Chr2	gffcl	locus	78780072	78781880	.	+	.	ID=RLOC_00018773;geneIDs=comp158410_c0_seq1.path1;transcripts=comp158410_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78780072	78781880	.	+	.	ID=comp158410_c0_seq1.mrna1;geneID=comp158410_c0_seq1.path1;Name=comp158410_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.7;matches=1799;mismatches=10;indels=13;unknowns=0;Target=comp158410_c0_seq1 1824 3 .;CDS_Target=comp158410_c0_seq1 275 165 .;locus=RLOC_00018773
Chr2	stalkie_big_nohaplotig	exon	78780072	78781880	98	+	.	Parent=comp158410_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78780234	78780344	.	+	0	Parent=comp158410_c0_seq1.mrna1
Chr2	gffcl	locus	78786308	78787088	.	+	.	ID=RLOC_00018774;geneIDs=comp146001_c1_seq1.path1;transcripts=comp146001_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78786308	78787088	.	+	.	ID=comp146001_c1_seq1.mrna1;geneID=comp146001_c1_seq1.path1;Name=comp146001_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=773;mismatches=8;indels=0;unknowns=0;Target=comp146001_c1_seq1 781 1 .;CDS_Target=comp146001_c1_seq1 508 398 .;locus=RLOC_00018774
Chr2	stalkie_big_nohaplotig	exon	78786308	78787088	98	+	.	Parent=comp146001_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78786705	78786815	.	+	0	Parent=comp146001_c1_seq1.mrna1
Chr2	gffcl	locus	78797625	78799310	.	+	.	ID=RLOC_00018775;geneIDs=FBgn0038424.1.path2;transcripts=FBgn0038424.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	78797625	78799310	.	+	.	ID=FBgn0038424.1.mrna2;geneID=FBgn0038424.1.path2;Name=FBgn0038424.1;Dir=sensecoverage=100.0;identity=99.9;matches=1357;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018775
Chr2	stalkie_big_nohaplotig	exon	78797625	78797744	100	+	.	Parent=FBgn0038424.1.mrna2;Target=FBgn0038424.1 1 120 +
Chr2	stalkie_big_nohaplotig	exon	78797806	78798062	99	+	.	Parent=FBgn0038424.1.mrna2;Target=FBgn0038424.1 121 377 +
Chr2	stalkie_big_nohaplotig	exon	78798118	78798553	99	+	.	Parent=FBgn0038424.1.mrna2;Target=FBgn0038424.1 378 813 +
Chr2	stalkie_big_nohaplotig	exon	78798659	78798788	100	+	.	Parent=FBgn0038424.1.mrna2;Target=FBgn0038424.1 814 943 +
Chr2	stalkie_big_nohaplotig	exon	78798845	78798947	100	+	.	Parent=FBgn0038424.1.mrna2;Target=FBgn0038424.1 944 1046 +
Chr2	stalkie_big_nohaplotig	exon	78798998	78799310	100	+	.	Parent=FBgn0038424.1.mrna2;Target=FBgn0038424.1 1047 1359 +
Chr2	stalkie_big_nohaplotig	CDS	78797625	78797744	.	+	0	Parent=FBgn0038424.1.mrna2;Target=FBgn0038424.1 1 120 +
Chr2	stalkie_big_nohaplotig	CDS	78797806	78798062	.	+	0	Parent=FBgn0038424.1.mrna2;Target=FBgn0038424.1 121 377 +
Chr2	stalkie_big_nohaplotig	CDS	78798118	78798553	.	+	1	Parent=FBgn0038424.1.mrna2;Target=FBgn0038424.1 378 813 +
Chr2	stalkie_big_nohaplotig	CDS	78798659	78798788	.	+	0	Parent=FBgn0038424.1.mrna2;Target=FBgn0038424.1 814 943 +
Chr2	stalkie_big_nohaplotig	CDS	78798845	78798947	.	+	2	Parent=FBgn0038424.1.mrna2;Target=FBgn0038424.1 944 1046 +
Chr2	stalkie_big_nohaplotig	CDS	78798998	78799310	.	+	1	Parent=FBgn0038424.1.mrna2;Target=FBgn0038424.1 1047 1359 +
Chr2	gffcl	locus	78800901	78801109	.	-	.	ID=RLOC_00018776;geneIDs=comp147560_c1_seq1.path2;transcripts=comp147560_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	78800901	78801109	.	-	.	ID=comp147560_c1_seq1.mrna2;geneID=comp147560_c1_seq1.path2;Name=comp147560_c1_seq1;Dir=indeterminatecoverage=76.0;identity=100.0;matches=209;mismatches=0;indels=0;unknowns=0;Target=comp147560_c1_seq1 275 67 .;CDS_Target=comp147560_c1_seq1 203 69 .;locus=RLOC_00018776
Chr2	stalkie_big_nohaplotig	exon	78800901	78801109	100	-	.	Parent=comp147560_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	78800973	78801107	.	-	0	Parent=comp147560_c1_seq1.mrna2
Chr2	gffcl	locus	78801792	78804890	.	+	.	ID=RLOC_00018777;geneIDs=comp158279_c0_seq1.path1;transcripts=comp158279_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78801792	78804890	.	+	.	ID=comp158279_c0_seq1.mrna1;geneID=comp158279_c0_seq1.path1;Name=comp158279_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=833;mismatches=6;indels=0;unknowns=0;locus=RLOC_00018777
Chr2	stalkie_big_nohaplotig	exon	78801792	78801815	100	+	.	Parent=comp158279_c0_seq1.mrna1;Target=comp158279_c0_seq1 1 24 +
Chr2	stalkie_big_nohaplotig	exon	78802324	78802409	100	+	.	Parent=comp158279_c0_seq1.mrna1;Target=comp158279_c0_seq1 25 110 +
Chr2	stalkie_big_nohaplotig	exon	78803920	78804176	100	+	.	Parent=comp158279_c0_seq1.mrna1;Target=comp158279_c0_seq1 111 367 +
Chr2	stalkie_big_nohaplotig	exon	78804240	78804337	100	+	.	Parent=comp158279_c0_seq1.mrna1;Target=comp158279_c0_seq1 368 465 +
Chr2	stalkie_big_nohaplotig	exon	78804454	78804563	100	+	.	Parent=comp158279_c0_seq1.mrna1;Target=comp158279_c0_seq1 466 575 +
Chr2	stalkie_big_nohaplotig	exon	78804627	78804890	97	+	.	Parent=comp158279_c0_seq1.mrna1;Target=comp158279_c0_seq1 576 839 +
Chr2	stalkie_big_nohaplotig	CDS	78802352	78802409	.	+	0	Parent=comp158279_c0_seq1.mrna1;Target=comp158279_c0_seq1 53 110 +
Chr2	stalkie_big_nohaplotig	CDS	78803920	78804176	.	+	2	Parent=comp158279_c0_seq1.mrna1;Target=comp158279_c0_seq1 111 367 +
Chr2	stalkie_big_nohaplotig	CDS	78804240	78804337	.	+	0	Parent=comp158279_c0_seq1.mrna1;Target=comp158279_c0_seq1 368 465 +
Chr2	stalkie_big_nohaplotig	CDS	78804454	78804563	.	+	1	Parent=comp158279_c0_seq1.mrna1;Target=comp158279_c0_seq1 466 575 +
Chr2	stalkie_big_nohaplotig	CDS	78804627	78804835	.	+	2	Parent=comp158279_c0_seq1.mrna1;Target=comp158279_c0_seq1 576 784 +
Chr2	gffcl	locus	78808731	78808939	.	-	.	ID=RLOC_00018778;geneIDs=comp147560_c1_seq1.path3;transcripts=comp147560_c1_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	78808731	78808939	.	-	.	ID=comp147560_c1_seq1.mrna3;geneID=comp147560_c1_seq1.path3;Name=comp147560_c1_seq1;Dir=indeterminatecoverage=76.0;identity=100.0;matches=209;mismatches=0;indels=0;unknowns=0;Target=comp147560_c1_seq1 275 67 .;CDS_Target=comp147560_c1_seq1 203 69 .;locus=RLOC_00018778
Chr2	stalkie_big_nohaplotig	exon	78808731	78808939	100	-	.	Parent=comp147560_c1_seq1.mrna3
Chr2	stalkie_big_nohaplotig	CDS	78808803	78808937	.	-	0	Parent=comp147560_c1_seq1.mrna3
Chr2	gffcl	locus	78815432	78816650	.	+	.	ID=RLOC_00018779;geneIDs=comp158928_c1_seq1.path1;transcripts=comp158928_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78815432	78816650	.	+	.	ID=comp158928_c1_seq1.mrna1;geneID=comp158928_c1_seq1.path1;Name=comp158928_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1217;mismatches=2;indels=0;unknowns=0;Target=comp158928_c1_seq1 1219 1 .;CDS_Target=comp158928_c1_seq1 331 275 .;locus=RLOC_00018779
Chr2	stalkie_big_nohaplotig	exon	78815432	78816650	99	+	.	Parent=comp158928_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78815706	78815762	.	+	0	Parent=comp158928_c1_seq1.mrna1
Chr2	gffcl	locus	78817065	78818423	.	+	.	ID=RLOC_00018780;geneIDs=comp159003_c0_seq1.path1;transcripts=comp159003_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78817065	78818423	.	+	.	ID=comp159003_c0_seq1.mrna1;geneID=comp159003_c0_seq1.path1;Name=comp159003_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.6;matches=1354;mismatches=4;indels=2;unknowns=0;Target=comp159003_c0_seq1 1359 1 .;CDS_Target=comp159003_c0_seq1 62 3 .;locus=RLOC_00018780
Chr2	stalkie_big_nohaplotig	exon	78817065	78818423	99	+	.	Parent=comp159003_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78817067	78817125	.	+	0	Parent=comp159003_c0_seq1.mrna1
Chr2	gffcl	locus	78818661	78872584	.	-	.	ID=RLOC_00018781;geneIDs=comp135839_c0_seq1.path1;transcripts=comp135839_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78818661	78872584	.	-	.	ID=comp135839_c0_seq1.mrna1;geneID=comp135839_c0_seq1.path1;Name=comp135839_c0_seq1;Dir=sensecoverage=99.2;identity=99.8;matches=639;mismatches=1;indels=0;unknowns=0;Target=comp135839_c0_seq1 423 563 +;locus=RLOC_00018781
Chr2	stalkie_big_nohaplotig	exon	78818661	78819149	99	-	.	Parent=comp135839_c0_seq1.mrna1;Target=comp135839_c0_seq1 157 645 +
Chr2	stalkie_big_nohaplotig	exon	78872434	78872584	100	-	.	Parent=comp135839_c0_seq1.mrna1;Target=comp135839_c0_seq1 6 156 +
Chr2	stalkie_big_nohaplotig	CDS	78818743	78818883	.	-	0	Parent=comp135839_c0_seq1.mrna1
Chr2	gffcl	locus	78875701	78877219	.	-	.	ID=RLOC_00018782;geneIDs=FBgn0053301.1.path1;transcripts=FBgn0053301.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78875701	78877219	.	-	.	ID=FBgn0053301.1.mrna1;geneID=FBgn0053301.1.path1;Name=FBgn0053301.1;Dir=sensecoverage=100.0;identity=99.2;matches=1232;mismatches=10;indels=0;unknowns=0;locus=RLOC_00018782
Chr2	stalkie_big_nohaplotig	exon	78875701	78875885	98	-	.	Parent=FBgn0053301.1.mrna1;Target=FBgn0053301.1 1058 1242 +
Chr2	stalkie_big_nohaplotig	exon	78875971	78876187	99	-	.	Parent=FBgn0053301.1.mrna1;Target=FBgn0053301.1 841 1057 +
Chr2	stalkie_big_nohaplotig	exon	78876254	78876550	98	-	.	Parent=FBgn0053301.1.mrna1;Target=FBgn0053301.1 544 840 +
Chr2	stalkie_big_nohaplotig	exon	78876619	78876778	98	-	.	Parent=FBgn0053301.1.mrna1;Target=FBgn0053301.1 384 543 +
Chr2	stalkie_big_nohaplotig	exon	78876837	78877219	99	-	.	Parent=FBgn0053301.1.mrna1;Target=FBgn0053301.1 1 383 +
Chr2	stalkie_big_nohaplotig	CDS	78875701	78875885	.	-	2	Parent=FBgn0053301.1.mrna1;Target=FBgn0053301.1 1058 1242 +
Chr2	stalkie_big_nohaplotig	CDS	78875971	78876187	.	-	0	Parent=FBgn0053301.1.mrna1;Target=FBgn0053301.1 841 1057 +
Chr2	stalkie_big_nohaplotig	CDS	78876254	78876550	.	-	0	Parent=FBgn0053301.1.mrna1;Target=FBgn0053301.1 544 840 +
Chr2	stalkie_big_nohaplotig	CDS	78876619	78876778	.	-	1	Parent=FBgn0053301.1.mrna1;Target=FBgn0053301.1 384 543 +
Chr2	stalkie_big_nohaplotig	CDS	78876837	78877219	.	-	0	Parent=FBgn0053301.1.mrna1;Target=FBgn0053301.1 1 383 +
Chr2	gffcl	locus	78884343	78888557	.	+	.	ID=RLOC_00018783;geneIDs=FBgn0038076.1.path1;transcripts=FBgn0038076.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78884343	78888557	.	+	.	ID=FBgn0038076.1.mrna1;geneID=FBgn0038076.1.path1;Name=FBgn0038076.1;Dir=sensecoverage=99.9;identity=99.5;matches=1533;mismatches=7;indels=0;unknowns=0;locus=RLOC_00018783
Chr2	stalkie_big_nohaplotig	exon	78884343	78884538	99	+	.	Parent=FBgn0038076.1.mrna1;Target=FBgn0038076.1 1 196 +
Chr2	stalkie_big_nohaplotig	exon	78884613	78885002	99	+	.	Parent=FBgn0038076.1.mrna1;Target=FBgn0038076.1 197 586 +
Chr2	stalkie_big_nohaplotig	exon	78886552	78886627	100	+	.	Parent=FBgn0038076.1.mrna1;Target=FBgn0038076.1 587 662 +
Chr2	stalkie_big_nohaplotig	exon	78886778	78886892	100	+	.	Parent=FBgn0038076.1.mrna1;Target=FBgn0038076.1 663 777 +
Chr2	stalkie_big_nohaplotig	exon	78886974	78887156	99	+	.	Parent=FBgn0038076.1.mrna1;Target=FBgn0038076.1 778 960 +
Chr2	stalkie_big_nohaplotig	exon	78887829	78888252	99	+	.	Parent=FBgn0038076.1.mrna1;Target=FBgn0038076.1 961 1384 +
Chr2	stalkie_big_nohaplotig	exon	78888402	78888557	99	+	.	Parent=FBgn0038076.1.mrna1;Target=FBgn0038076.1 1385 1540 +
Chr2	stalkie_big_nohaplotig	CDS	78884343	78884538	.	+	0	Parent=FBgn0038076.1.mrna1;Target=FBgn0038076.1 1 196 +
Chr2	stalkie_big_nohaplotig	CDS	78884613	78885002	.	+	2	Parent=FBgn0038076.1.mrna1;Target=FBgn0038076.1 197 586 +
Chr2	stalkie_big_nohaplotig	CDS	78886552	78886627	.	+	2	Parent=FBgn0038076.1.mrna1;Target=FBgn0038076.1 587 662 +
Chr2	stalkie_big_nohaplotig	CDS	78886778	78886892	.	+	1	Parent=FBgn0038076.1.mrna1;Target=FBgn0038076.1 663 777 +
Chr2	stalkie_big_nohaplotig	CDS	78886974	78887156	.	+	0	Parent=FBgn0038076.1.mrna1;Target=FBgn0038076.1 778 960 +
Chr2	stalkie_big_nohaplotig	CDS	78887829	78888252	.	+	0	Parent=FBgn0038076.1.mrna1;Target=FBgn0038076.1 961 1384 +
Chr2	stalkie_big_nohaplotig	CDS	78888402	78888556	.	+	2	Parent=FBgn0038076.1.mrna1;Target=FBgn0038076.1 1385 1539 +
Chr2	gffcl	locus	78894426	78898354	.	-	.	ID=RLOC_00018784;geneIDs=FBgn0037708.1.path1;transcripts=FBgn0037708.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78894426	78898354	.	-	.	ID=FBgn0037708.1.mrna1;geneID=FBgn0037708.1.path1;Name=FBgn0037708.1;Dir=sensecoverage=100.0;identity=99.5;matches=1734;mismatches=8;indels=1;unknowns=0;Target=FBgn0037708.1 3 110 +;locus=RLOC_00018784
Chr2	stalkie_big_nohaplotig	exon	78894426	78895511	99	-	.	Parent=FBgn0037708.1.mrna1;Target=FBgn0037708.1 658 1743 +
Chr2	stalkie_big_nohaplotig	exon	78897640	78897929	99	-	.	Parent=FBgn0037708.1.mrna1;Target=FBgn0037708.1 368 657 +
Chr2	stalkie_big_nohaplotig	exon	78897989	78898354	98	-	.	Parent=FBgn0037708.1.mrna1;Target=FBgn0037708.1 1 367 +
Chr2	stalkie_big_nohaplotig	CDS	78898246	78898352	.	-	0	Parent=FBgn0037708.1.mrna1
Chr2	gffcl	locus	78898911	78902211	.	+	.	ID=RLOC_00018785;geneIDs=FBgn0037709.1.path1;transcripts=FBgn0037709.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78898911	78902211	.	+	.	ID=FBgn0037709.1.mrna1;geneID=FBgn0037709.1.path1;Name=FBgn0037709.1;Dir=sensecoverage=100.0;identity=99.9;matches=1340;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018785
Chr2	stalkie_big_nohaplotig	exon	78898911	78899006	100	+	.	Parent=FBgn0037709.1.mrna1;Target=FBgn0037709.1 1 96 +
Chr2	stalkie_big_nohaplotig	exon	78899064	78899366	100	+	.	Parent=FBgn0037709.1.mrna1;Target=FBgn0037709.1 97 399 +
Chr2	stalkie_big_nohaplotig	exon	78899430	78899593	99	+	.	Parent=FBgn0037709.1.mrna1;Target=FBgn0037709.1 400 563 +
Chr2	stalkie_big_nohaplotig	exon	78901221	78901288	100	+	.	Parent=FBgn0037709.1.mrna1;Target=FBgn0037709.1 564 631 +
Chr2	stalkie_big_nohaplotig	exon	78901365	78901530	100	+	.	Parent=FBgn0037709.1.mrna1;Target=FBgn0037709.1 632 797 +
Chr2	stalkie_big_nohaplotig	exon	78901602	78901805	100	+	.	Parent=FBgn0037709.1.mrna1;Target=FBgn0037709.1 798 1001 +
Chr2	stalkie_big_nohaplotig	exon	78901872	78902211	100	+	.	Parent=FBgn0037709.1.mrna1;Target=FBgn0037709.1 1002 1341 +
Chr2	stalkie_big_nohaplotig	CDS	78898911	78899006	.	+	0	Parent=FBgn0037709.1.mrna1;Target=FBgn0037709.1 1 96 +
Chr2	stalkie_big_nohaplotig	CDS	78899064	78899366	.	+	0	Parent=FBgn0037709.1.mrna1;Target=FBgn0037709.1 97 399 +
Chr2	stalkie_big_nohaplotig	CDS	78899430	78899593	.	+	0	Parent=FBgn0037709.1.mrna1;Target=FBgn0037709.1 400 563 +
Chr2	stalkie_big_nohaplotig	CDS	78901221	78901288	.	+	1	Parent=FBgn0037709.1.mrna1;Target=FBgn0037709.1 564 631 +
Chr2	stalkie_big_nohaplotig	CDS	78901365	78901530	.	+	2	Parent=FBgn0037709.1.mrna1;Target=FBgn0037709.1 632 797 +
Chr2	stalkie_big_nohaplotig	CDS	78901602	78901805	.	+	1	Parent=FBgn0037709.1.mrna1;Target=FBgn0037709.1 798 1001 +
Chr2	stalkie_big_nohaplotig	CDS	78901872	78902211	.	+	1	Parent=FBgn0037709.1.mrna1;Target=FBgn0037709.1 1002 1341 +
Chr2	gffcl	locus	78902870	78904273	.	-	.	ID=RLOC_00018786;geneIDs=FBgn0024833.1.path1;transcripts=FBgn0024833.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78902870	78904273	.	-	.	ID=FBgn0024833.1.mrna1;geneID=FBgn0024833.1.path1;Name=FBgn0024833.1;Dir=sensecoverage=100.0;identity=99.9;matches=1343;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018786
Chr2	stalkie_big_nohaplotig	exon	78902870	78903325	100	-	.	Parent=FBgn0024833.1.mrna1;Target=FBgn0024833.1 889 1344 +
Chr2	stalkie_big_nohaplotig	exon	78903386	78904273	99	-	.	Parent=FBgn0024833.1.mrna1;Target=FBgn0024833.1 1 888 +
Chr2	stalkie_big_nohaplotig	CDS	78902870	78903325	.	-	0	Parent=FBgn0024833.1.mrna1;Target=FBgn0024833.1 889 1344 +
Chr2	stalkie_big_nohaplotig	CDS	78903386	78904273	.	-	0	Parent=FBgn0024833.1.mrna1;Target=FBgn0024833.1 1 888 +
Chr2	gffcl	locus	78907079	78912647	.	+	.	ID=RLOC_00018787;geneIDs=FBgn0261532.1.path1;transcripts=FBgn0261532.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78907079	78912647	.	+	.	ID=FBgn0261532.1.mrna1;geneID=FBgn0261532.1.path1;Name=FBgn0261532.1;Dir=sensecoverage=100.0;identity=99.9;matches=2961;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018787
Chr2	stalkie_big_nohaplotig	exon	78907079	78907276	100	+	.	Parent=FBgn0261532.1.mrna1;Target=FBgn0261532.1 1 198 +
Chr2	stalkie_big_nohaplotig	exon	78907348	78907515	100	+	.	Parent=FBgn0261532.1.mrna1;Target=FBgn0261532.1 199 366 +
Chr2	stalkie_big_nohaplotig	exon	78907580	78907729	100	+	.	Parent=FBgn0261532.1.mrna1;Target=FBgn0261532.1 367 516 +
Chr2	stalkie_big_nohaplotig	exon	78907787	78907965	100	+	.	Parent=FBgn0261532.1.mrna1;Target=FBgn0261532.1 517 695 +
Chr2	stalkie_big_nohaplotig	exon	78908196	78908883	100	+	.	Parent=FBgn0261532.1.mrna1;Target=FBgn0261532.1 696 1383 +
Chr2	stalkie_big_nohaplotig	exon	78908950	78909549	99	+	.	Parent=FBgn0261532.1.mrna1;Target=FBgn0261532.1 1384 1983 +
Chr2	stalkie_big_nohaplotig	exon	78909607	78909810	100	+	.	Parent=FBgn0261532.1.mrna1;Target=FBgn0261532.1 1984 2187 +
Chr2	stalkie_big_nohaplotig	exon	78911680	78911817	98	+	.	Parent=FBgn0261532.1.mrna1;Target=FBgn0261532.1 2188 2325 +
Chr2	stalkie_big_nohaplotig	exon	78911877	78911969	100	+	.	Parent=FBgn0261532.1.mrna1;Target=FBgn0261532.1 2326 2418 +
Chr2	stalkie_big_nohaplotig	exon	78912034	78912500	100	+	.	Parent=FBgn0261532.1.mrna1;Target=FBgn0261532.1 2419 2885 +
Chr2	stalkie_big_nohaplotig	exon	78912569	78912647	100	+	.	Parent=FBgn0261532.1.mrna1;Target=FBgn0261532.1 2886 2964 +
Chr2	stalkie_big_nohaplotig	CDS	78907079	78907276	.	+	0	Parent=FBgn0261532.1.mrna1;Target=FBgn0261532.1 1 198 +
Chr2	stalkie_big_nohaplotig	CDS	78907348	78907515	.	+	0	Parent=FBgn0261532.1.mrna1;Target=FBgn0261532.1 199 366 +
Chr2	stalkie_big_nohaplotig	CDS	78907580	78907729	.	+	0	Parent=FBgn0261532.1.mrna1;Target=FBgn0261532.1 367 516 +
Chr2	stalkie_big_nohaplotig	CDS	78907787	78907965	.	+	0	Parent=FBgn0261532.1.mrna1;Target=FBgn0261532.1 517 695 +
Chr2	stalkie_big_nohaplotig	CDS	78908196	78908883	.	+	1	Parent=FBgn0261532.1.mrna1;Target=FBgn0261532.1 696 1383 +
Chr2	stalkie_big_nohaplotig	CDS	78908950	78909549	.	+	0	Parent=FBgn0261532.1.mrna1;Target=FBgn0261532.1 1384 1983 +
Chr2	stalkie_big_nohaplotig	CDS	78909607	78909810	.	+	0	Parent=FBgn0261532.1.mrna1;Target=FBgn0261532.1 1984 2187 +
Chr2	stalkie_big_nohaplotig	CDS	78911680	78911817	.	+	0	Parent=FBgn0261532.1.mrna1;Target=FBgn0261532.1 2188 2325 +
Chr2	stalkie_big_nohaplotig	CDS	78911877	78911969	.	+	0	Parent=FBgn0261532.1.mrna1;Target=FBgn0261532.1 2326 2418 +
Chr2	stalkie_big_nohaplotig	CDS	78912034	78912500	.	+	0	Parent=FBgn0261532.1.mrna1;Target=FBgn0261532.1 2419 2885 +
Chr2	stalkie_big_nohaplotig	CDS	78912569	78912647	.	+	1	Parent=FBgn0261532.1.mrna1;Target=FBgn0261532.1 2886 2964 +
Chr2	gffcl	locus	78914821	79692788	.	.	.	ID=RLOC_00018788;geneIDs=FBgn0042693.1.path1,comp146920_c0_seq1.path1,comp151960_c0_seq1.path1,comp157548_c0_seq1.path1,comp158435_c7_seq1.path1,comp171611_c0_seq1.path1;transcripts=comp171611_c0_seq1.mrna1,comp158435_c7_seq1.mrna1,FBgn0042693.1.mrna1,comp151960_c0_seq1.mrna1,comp157548_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78914821	78923536	.	-	.	ID=comp171611_c0_seq1.mrna1;geneID=comp171611_c0_seq1.path1;Name=comp171611_c0_seq1;Dir=antisensecoverage=98.2;identity=100.0;matches=821;mismatches=0;indels=0;unknowns=0;Target=comp171611_c0_seq1 296 361 .;locus=RLOC_00018788
Chr2	stalkie_big_nohaplotig	exon	78914821	78915617	100	-	.	Parent=comp171611_c0_seq1.mrna1;Target=comp171611_c0_seq1 16 812 -
Chr2	stalkie_big_nohaplotig	exon	78923513	78923536	100	-	.	Parent=comp171611_c0_seq1.mrna1;Target=comp171611_c0_seq1 813 836 -
Chr2	stalkie_big_nohaplotig	CDS	78915101	78915166	.	-	0	Parent=comp171611_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78919758	79692788	.	-	.	ID=comp158435_c7_seq1.mrna1;geneID=comp158435_c7_seq1.path1;Name=comp158435_c7_seq1;Dir=antisensecoverage=90.7;identity=96.5;matches=3441;mismatches=63;indels=63;unknowns=0;locus=RLOC_00018788
Chr2	stalkie_big_nohaplotig	exon	78919758	78920946	98	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 1 1180 -
Chr2	stalkie_big_nohaplotig	exon	78923513	78924227	99	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 1181 1895 -
Chr2	stalkie_big_nohaplotig	exon	78928733	78928963	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 1896 2126 -
Chr2	stalkie_big_nohaplotig	exon	78929034	78929368	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 2127 2461 -
Chr2	stalkie_big_nohaplotig	exon	78929431	78929627	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 2462 2658 -
Chr2	stalkie_big_nohaplotig	exon	78950812	78950989	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 2659 2836 -
Chr2	stalkie_big_nohaplotig	exon	78965262	78965416	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 2837 2991 -
Chr2	stalkie_big_nohaplotig	exon	78972659	78972672	78	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 2992 3005 -
Chr2	stalkie_big_nohaplotig	exon	78984199	78984206	87	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3006 3013 -
Chr2	stalkie_big_nohaplotig	exon	78987203	78987212	90	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3014 3023 -
Chr2	stalkie_big_nohaplotig	exon	78991127	78991129	33	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3024 3026 -
Chr2	stalkie_big_nohaplotig	exon	79031034	79031066	51	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3028 3056 -
Chr2	stalkie_big_nohaplotig	exon	79071330	79071332	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3057 3059 -
Chr2	stalkie_big_nohaplotig	exon	79100410	79100421	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3060 3071 -
Chr2	stalkie_big_nohaplotig	exon	79108063	79108074	83	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3103 3114 -
Chr2	stalkie_big_nohaplotig	exon	79109125	79109135	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3115 3125 -
Chr2	stalkie_big_nohaplotig	exon	79113673	79113674	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3126 3127 -
Chr2	stalkie_big_nohaplotig	exon	79113708	79113709	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3182 3183 -
Chr2	stalkie_big_nohaplotig	exon	79121987	79121992	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3184 3189 -
Chr2	stalkie_big_nohaplotig	exon	79128728	79128757	64	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3190 3231 -
Chr2	stalkie_big_nohaplotig	exon	79128777	79128784	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3282 3289 -
Chr2	stalkie_big_nohaplotig	exon	79152274	79152275	50	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3307 3308 -
Chr2	stalkie_big_nohaplotig	exon	79163709	79163721	69	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3309 3321 -
Chr2	stalkie_big_nohaplotig	exon	79171327	79171329	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3322 3324 -
Chr2	stalkie_big_nohaplotig	exon	79177807	79177814	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3325 3332 -
Chr2	stalkie_big_nohaplotig	exon	79182388	79182389	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3333 3334 -
Chr2	stalkie_big_nohaplotig	exon	79188244	79188250	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3335 3341 -
Chr2	stalkie_big_nohaplotig	exon	79196475	79196500	61	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3342 3358 -
Chr2	stalkie_big_nohaplotig	exon	79205160	79205167	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3375 3382 -
Chr2	stalkie_big_nohaplotig	exon	79208694	79208698	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3383 3387 -
Chr2	stalkie_big_nohaplotig	exon	79213329	79213335	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3388 3394 -
Chr2	stalkie_big_nohaplotig	exon	79213371	79213376	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3454 3459 -
Chr2	stalkie_big_nohaplotig	exon	79214579	79214592	92	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3460 3472 -
Chr2	stalkie_big_nohaplotig	exon	79221862	79221872	81	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3473 3482 -
Chr2	stalkie_big_nohaplotig	exon	79224750	79224756	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3495 3501 -
Chr2	stalkie_big_nohaplotig	exon	79228628	79228638	81	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3502 3512 -
Chr2	stalkie_big_nohaplotig	exon	79232762	79232765	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 3513 3516 -
Chr2	stalkie_big_nohaplotig	exon	79452628	79452641	85	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4246 4259 -
Chr2	stalkie_big_nohaplotig	exon	79457981	79457991	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4260 4270 -
Chr2	stalkie_big_nohaplotig	exon	79481512	79481519	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4292 4299 -
Chr2	stalkie_big_nohaplotig	exon	79489011	79489019	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4300 4308 -
Chr2	stalkie_big_nohaplotig	exon	79496079	79496085	85	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4309 4315 -
Chr2	stalkie_big_nohaplotig	exon	79515031	79515032	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4316 4317 -
Chr2	stalkie_big_nohaplotig	exon	79518098	79518108	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4379 4389 -
Chr2	stalkie_big_nohaplotig	exon	79629440	79629444	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4500 4504 -
Chr2	stalkie_big_nohaplotig	exon	79636273	79636278	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4505 4510 -
Chr2	stalkie_big_nohaplotig	exon	79643684	79643691	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4511 4518 -
Chr2	stalkie_big_nohaplotig	exon	79646886	79646890	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4519 4523 -
Chr2	stalkie_big_nohaplotig	exon	79649192	79649198	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4524 4530 -
Chr2	stalkie_big_nohaplotig	exon	79649741	79649743	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4531 4533 -
Chr2	stalkie_big_nohaplotig	exon	79652971	79652981	90	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4534 4544 -
Chr2	stalkie_big_nohaplotig	exon	79668059	79668069	81	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4545 4555 -
Chr2	stalkie_big_nohaplotig	exon	79671471	79671480	80	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4567 4576 -
Chr2	stalkie_big_nohaplotig	exon	79675675	79675682	87	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4577 4584 -
Chr2	stalkie_big_nohaplotig	exon	79681050	79681058	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4585 4593 -
Chr2	stalkie_big_nohaplotig	exon	79687627	79687633	26	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4598 4623 -
Chr2	stalkie_big_nohaplotig	exon	79688836	79688874	55	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4646 4692 -
Chr2	stalkie_big_nohaplotig	exon	79688877	79688886	90	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4725 4734 -
Chr2	stalkie_big_nohaplotig	exon	79689185	79689189	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4735 4739 -
Chr2	stalkie_big_nohaplotig	exon	79690720	79690721	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4740 4741 -
Chr2	stalkie_big_nohaplotig	exon	79691091	79691103	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4742 4754 -
Chr2	stalkie_big_nohaplotig	exon	79692778	79692788	100	-	.	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 4755 4765 -
Chr2	stalkie_big_nohaplotig	CDS	78923810	78924227	.	-	1	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 1478 1895 .
Chr2	stalkie_big_nohaplotig	CDS	78928733	78928963	.	-	1	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 1896 2126 .
Chr2	stalkie_big_nohaplotig	CDS	78929034	78929368	.	-	0	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 2127 2461 .
Chr2	stalkie_big_nohaplotig	CDS	78929431	78929499	.	-	0	Parent=comp158435_c7_seq1.mrna1;Target=comp158435_c7_seq1 2462 2530 .
Chr2	stalkie_big_nohaplotig	mRNA	78920806	78965618	.	-	.	ID=FBgn0042693.1.mrna1;geneID=FBgn0042693.1.path1;Name=FBgn0042693.1;Dir=sensecoverage=100.0;identity=98.1;matches=2051;mismatches=1;indels=39;unknowns=0;locus=RLOC_00018788
Chr2	stalkie_big_nohaplotig	exon	78920806	78920946	100	-	.	Parent=FBgn0042693.1.mrna1;Target=FBgn0042693.1 1951 2091 +
Chr2	stalkie_big_nohaplotig	exon	78923513	78923732	100	-	.	Parent=FBgn0042693.1.mrna1;Target=FBgn0042693.1 1731 1950 +
Chr2	stalkie_big_nohaplotig	exon	78923835	78924227	99	-	.	Parent=FBgn0042693.1.mrna1;Target=FBgn0042693.1 1338 1730 +
Chr2	stalkie_big_nohaplotig	exon	78928733	78928963	100	-	.	Parent=FBgn0042693.1.mrna1;Target=FBgn0042693.1 1107 1337 +
Chr2	stalkie_big_nohaplotig	exon	78929034	78929368	100	-	.	Parent=FBgn0042693.1.mrna1;Target=FBgn0042693.1 772 1106 +
Chr2	stalkie_big_nohaplotig	exon	78929431	78929627	100	-	.	Parent=FBgn0042693.1.mrna1;Target=FBgn0042693.1 575 771 +
Chr2	stalkie_big_nohaplotig	exon	78950812	78950989	100	-	.	Parent=FBgn0042693.1.mrna1;Target=FBgn0042693.1 397 574 +
Chr2	stalkie_big_nohaplotig	exon	78965262	78965618	90	-	.	Parent=FBgn0042693.1.mrna1;Target=FBgn0042693.1 1 396 +
Chr2	stalkie_big_nohaplotig	CDS	78920806	78920946	.	-	0	Parent=FBgn0042693.1.mrna1;Target=FBgn0042693.1 1951 2091 +
Chr2	stalkie_big_nohaplotig	CDS	78923513	78923732	.	-	1	Parent=FBgn0042693.1.mrna1;Target=FBgn0042693.1 1731 1950 +
Chr2	stalkie_big_nohaplotig	CDS	78923835	78924227	.	-	1	Parent=FBgn0042693.1.mrna1;Target=FBgn0042693.1 1338 1730 +
Chr2	stalkie_big_nohaplotig	CDS	78928733	78928963	.	-	1	Parent=FBgn0042693.1.mrna1;Target=FBgn0042693.1 1107 1337 +
Chr2	stalkie_big_nohaplotig	CDS	78929034	78929368	.	-	0	Parent=FBgn0042693.1.mrna1;Target=FBgn0042693.1 772 1106 +
Chr2	stalkie_big_nohaplotig	CDS	78929431	78929627	.	-	2	Parent=FBgn0042693.1.mrna1;Target=FBgn0042693.1 575 771 +
Chr2	stalkie_big_nohaplotig	CDS	78950812	78950989	.	-	0	Parent=FBgn0042693.1.mrna1;Target=FBgn0042693.1 397 574 +
Chr2	stalkie_big_nohaplotig	CDS	78965262	78965618	.	-	0	Parent=FBgn0042693.1.mrna1;Target=FBgn0042693.1 1 396 +
Chr2	stalkie_big_nohaplotig	mRNA	78929606	78936765	.	-	.	ID=comp151960_c0_seq1.mrna1;geneID=comp151960_c0_seq1.path1;Name=comp151960_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=903;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018788
Chr2	stalkie_big_nohaplotig	exon	78929606	78929627	100	-	.	Parent=comp151960_c0_seq1.mrna1;Target=comp151960_c0_seq1 885 906 +
Chr2	stalkie_big_nohaplotig	exon	78934777	78935293	100	-	.	Parent=comp151960_c0_seq1.mrna1;Target=comp151960_c0_seq1 368 884 +
Chr2	stalkie_big_nohaplotig	exon	78936399	78936765	99	-	.	Parent=comp151960_c0_seq1.mrna1;Target=comp151960_c0_seq1 1 367 +
Chr2	stalkie_big_nohaplotig	CDS	78929608	78929627	.	-	2	Parent=comp151960_c0_seq1.mrna1;Target=comp151960_c0_seq1 885 904 +
Chr2	stalkie_big_nohaplotig	CDS	78934777	78935293	.	-	0	Parent=comp151960_c0_seq1.mrna1;Target=comp151960_c0_seq1 368 884 +
Chr2	stalkie_big_nohaplotig	CDS	78936399	78936764	.	-	0	Parent=comp151960_c0_seq1.mrna1;Target=comp151960_c0_seq1 2 367 +
Chr2	stalkie_big_nohaplotig	mRNA	79228625	79229340	.	-	.	ID=comp157548_c0_seq1.mrna1;geneID=comp157548_c0_seq1.path1;Name=comp157548_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.1;matches=700;mismatches=14;indels=7;unknowns=0;Target=comp157548_c0_seq1 719 1 .;CDS_Target=comp157548_c0_seq1 493 356 .;locus=RLOC_00018788
Chr2	stalkie_big_nohaplotig	exon	79228625	79229340	97	-	.	Parent=comp157548_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	79228852	79228989	.	-	0	Parent=comp157548_c0_seq1.mrna1
Chr2	gffcl	locus	78915710	78916370	.	+	.	ID=RLOC_00018789;geneIDs=comp155294_c0_seq1.path1;transcripts=comp155294_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78915710	78916370	.	+	.	ID=comp155294_c0_seq1.mrna1;geneID=comp155294_c0_seq1.path1;Name=comp155294_c0_seq1;Dir=indeterminatecoverage=94.0;identity=97.6;matches=654;mismatches=7;indels=9;unknowns=0;Target=comp155294_c0_seq1 688 19 .;CDS_Target=comp155294_c0_seq1 467 192 .;locus=RLOC_00018789
Chr2	stalkie_big_nohaplotig	exon	78915710	78916370	97	+	.	Parent=comp155294_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78915883	78916149	.	+	0	Parent=comp155294_c0_seq1.mrna1
Chr2	gffcl	locus	78918451	80810417	.	.	.	ID=RLOC_00018790;geneIDs=FBgn0051269.1.path1,comp151552_c0_seq1.path1,comp157759_c0_seq1.path1,comp163457_c0_seq1.path1;transcripts=comp157759_c0_seq1.mrna1,FBgn0051269.1.mrna1,comp163457_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78918451	80810417	.	+	.	ID=comp157759_c0_seq1.mrna1;geneID=comp157759_c0_seq1.path1;Name=comp157759_c0_seq1;Dir=indeterminatecoverage=81.9;identity=97.1;matches=601;mismatches=8;indels=10;unknowns=0;Target=comp157759_c0_seq1 332 225 .;locus=RLOC_00018790
Chr2	stalkie_big_nohaplotig	exon	78918451	78918912	97	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 539 74 .
Chr2	stalkie_big_nohaplotig	exon	80635622	80635629	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 547 540 .
Chr2	stalkie_big_nohaplotig	exon	80647720	80647731	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 559 548 .
Chr2	stalkie_big_nohaplotig	exon	80652403	80652404	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 563 562 .
Chr2	stalkie_big_nohaplotig	exon	80657430	80657441	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 575 564 .
Chr2	stalkie_big_nohaplotig	exon	80662199	80662202	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 579 576 .
Chr2	stalkie_big_nohaplotig	exon	80664858	80664859	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 581 580 .
Chr2	stalkie_big_nohaplotig	exon	80669474	80669476	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 584 582 .
Chr2	stalkie_big_nohaplotig	exon	80674241	80674253	53	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 591 585 .
Chr2	stalkie_big_nohaplotig	exon	80678530	80678536	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 598 592 .
Chr2	stalkie_big_nohaplotig	exon	80685422	80685429	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 606 599 .
Chr2	stalkie_big_nohaplotig	exon	80688235	80688237	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 612 610 .
Chr2	stalkie_big_nohaplotig	exon	80696143	80696145	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 615 613 .
Chr2	stalkie_big_nohaplotig	exon	80710369	80710370	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 617 616 .
Chr2	stalkie_big_nohaplotig	exon	80723320	80723322	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 620 618 .
Chr2	stalkie_big_nohaplotig	exon	80728301	80728306	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 626 621 .
Chr2	stalkie_big_nohaplotig	exon	80734390	80734396	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 633 627 .
Chr2	stalkie_big_nohaplotig	exon	80757290	80757295	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 640 635 .
Chr2	stalkie_big_nohaplotig	exon	80760125	80760134	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 650 641 .
Chr2	stalkie_big_nohaplotig	exon	80767199	80767202	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 654 651 .
Chr2	stalkie_big_nohaplotig	exon	80780990	80780994	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 659 655 .
Chr2	stalkie_big_nohaplotig	exon	80782896	80782901	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 665 660 .
Chr2	stalkie_big_nohaplotig	exon	80799092	80799095	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 669 666 .
Chr2	stalkie_big_nohaplotig	exon	80802173	80802179	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 676 670 .
Chr2	stalkie_big_nohaplotig	exon	80806844	80806845	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 678 677 .
Chr2	stalkie_big_nohaplotig	exon	80810406	80810417	100	+	.	Parent=comp157759_c0_seq1.mrna1;Target=comp157759_c0_seq1 690 679 .
Chr2	stalkie_big_nohaplotig	CDS	78918599	78918705	.	+	0	Parent=comp157759_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80722897	80723706	.	-	.	ID=FBgn0051269.1.mrna1;geneID=FBgn0051269.1.path1;Name=FBgn0051269.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=806;mismatches=4;indels=0;unknowns=0;Target=FBgn0051269.1 810 1 .;locus=RLOC_00018790
Chr2	stalkie_big_nohaplotig	exon	80722897	80723706	99	-	.	Parent=FBgn0051269.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80722897	80723706	.	-	0	Parent=FBgn0051269.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80800128	80801997	.	-	.	ID=comp163457_c0_seq1.mrna1;geneID=comp163457_c0_seq1.path1;Name=comp163457_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=1841;mismatches=29;indels=3;unknowns=0;Target=comp163457_c0_seq1 1873 1 .;CDS_Target=comp163457_c0_seq1 214 2 .;locus=RLOC_00018790
Chr2	stalkie_big_nohaplotig	exon	80800128	80801997	98	-	.	Parent=comp163457_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80801784	80801996	.	-	0	Parent=comp163457_c0_seq1.mrna1
Chr2	gffcl	locus	78918964	78919694	.	+	.	ID=RLOC_00018791;geneIDs=comp153637_c0_seq1.path1;transcripts=comp153637_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78918964	78919694	.	+	.	ID=comp153637_c0_seq1.mrna1;geneID=comp153637_c0_seq1.path1;Name=comp153637_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.6;matches=722;mismatches=9;indels=1;unknowns=0;Target=comp153637_c0_seq1 733 2 .;CDS_Target=comp153637_c0_seq1 285 31 .;locus=RLOC_00018791
Chr2	stalkie_big_nohaplotig	exon	78918964	78919694	98	+	.	Parent=comp153637_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78918993	78919246	.	+	0	Parent=comp153637_c0_seq1.mrna1
Chr2	gffcl	locus	78921086	78921412	.	-	.	ID=RLOC_00018792;geneIDs=comp151478_c0_seq1.path1;transcripts=comp151478_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78921086	78921412	.	-	.	ID=comp151478_c0_seq1.mrna1;geneID=comp151478_c0_seq1.path1;Name=comp151478_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.7;matches=326;mismatches=1;indels=0;unknowns=0;Target=comp151478_c0_seq1 327 1 .;CDS_Target=comp151478_c0_seq1 277 173 .;locus=RLOC_00018792
Chr2	stalkie_big_nohaplotig	exon	78921086	78921412	99	-	.	Parent=comp151478_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78921136	78921240	.	-	0	Parent=comp151478_c0_seq1.mrna1
Chr2	gffcl	locus	78921534	78922203	.	+	.	ID=RLOC_00018793;geneIDs=comp155621_c0_seq1.path1;transcripts=comp155621_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78921534	78922203	.	+	.	ID=comp155621_c0_seq1.mrna1;geneID=comp155621_c0_seq1.path1;Name=comp155621_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.5;matches=657;mismatches=12;indels=5;unknowns=0;Target=comp155621_c0_seq1 674 2 .;CDS_Target=comp155621_c0_seq1 550 500 .;locus=RLOC_00018793
Chr2	stalkie_big_nohaplotig	exon	78921534	78922203	97	+	.	Parent=comp155621_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78922033	78922079	.	+	0	Parent=comp155621_c0_seq1.mrna1
Chr2	gffcl	locus	78974677	78975658	.	+	.	ID=RLOC_00018794;geneIDs=FBgn0038571.1.path1,comp149448_c1_seq1.path1;transcripts=FBgn0038571.1.mrna1,comp149448_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78974677	78975658	.	+	.	ID=FBgn0038571.1.mrna1;geneID=FBgn0038571.1.path1;Name=FBgn0038571.1;Dir=sensecoverage=100.0;identity=100.0;matches=432;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018794
Chr2	stalkie_big_nohaplotig	exon	78974677	78974781	100	+	.	Parent=FBgn0038571.1.mrna1;Target=FBgn0038571.1 1 105 +
Chr2	stalkie_big_nohaplotig	exon	78974841	78974982	100	+	.	Parent=FBgn0038571.1.mrna1;Target=FBgn0038571.1 106 247 +
Chr2	stalkie_big_nohaplotig	exon	78975474	78975658	100	+	.	Parent=FBgn0038571.1.mrna1;Target=FBgn0038571.1 248 432 +
Chr2	stalkie_big_nohaplotig	CDS	78974677	78974781	.	+	0	Parent=FBgn0038571.1.mrna1;Target=FBgn0038571.1 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	78974841	78974982	.	+	0	Parent=FBgn0038571.1.mrna1;Target=FBgn0038571.1 106 247 +
Chr2	stalkie_big_nohaplotig	CDS	78975474	78975658	.	+	2	Parent=FBgn0038571.1.mrna1;Target=FBgn0038571.1 248 432 +
Chr2	stalkie_big_nohaplotig	mRNA	78974959	78975495	.	+	.	ID=comp149448_c1_seq1.mrna1;geneID=comp149448_c1_seq1.path1;Name=comp149448_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=537;mismatches=0;indels=0;unknowns=0;Target=comp149448_c1_seq1 537 1 .;CDS_Target=comp149448_c1_seq1 405 316 .;locus=RLOC_00018794
Chr2	stalkie_big_nohaplotig	exon	78974959	78975495	100	+	.	Parent=comp149448_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78975274	78975363	.	+	0	Parent=comp149448_c1_seq1.mrna1
Chr2	gffcl	locus	78975948	78976799	.	.	.	ID=RLOC_00018795;geneIDs=FBgn0038570.1.path1,comp135444_c0_seq1.path1;transcripts=FBgn0038570.1.mrna1,comp135444_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78975948	78976799	.	+	.	ID=FBgn0038570.1.mrna1;geneID=FBgn0038570.1.path1;Name=FBgn0038570.1;Dir=sensecoverage=100.0;identity=99.8;matches=605;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018795
Chr2	stalkie_big_nohaplotig	exon	78975948	78976091	99	+	.	Parent=FBgn0038570.1.mrna1;Target=FBgn0038570.1 1 144 +
Chr2	stalkie_big_nohaplotig	exon	78976282	78976416	100	+	.	Parent=FBgn0038570.1.mrna1;Target=FBgn0038570.1 145 279 +
Chr2	stalkie_big_nohaplotig	exon	78976473	78976799	100	+	.	Parent=FBgn0038570.1.mrna1;Target=FBgn0038570.1 280 606 +
Chr2	stalkie_big_nohaplotig	CDS	78975948	78976091	.	+	0	Parent=FBgn0038570.1.mrna1;Target=FBgn0038570.1 1 144 +
Chr2	stalkie_big_nohaplotig	CDS	78976282	78976416	.	+	0	Parent=FBgn0038570.1.mrna1;Target=FBgn0038570.1 145 279 +
Chr2	stalkie_big_nohaplotig	CDS	78976473	78976799	.	+	0	Parent=FBgn0038570.1.mrna1;Target=FBgn0038570.1 280 606 +
Chr2	stalkie_big_nohaplotig	mRNA	78976071	78976305	.	-	.	ID=comp135444_c0_seq1.mrna1;geneID=comp135444_c0_seq1.path1;Name=comp135444_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=234;mismatches=1;indels=0;unknowns=0;Target=comp135444_c0_seq1 235 1 .;CDS_Target=comp135444_c0_seq1 235 71 .;locus=RLOC_00018795
Chr2	stalkie_big_nohaplotig	exon	78976071	78976305	99	-	.	Parent=comp135444_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	78976071	78976235	.	-	0	Parent=comp135444_c0_seq1.mrna1
Chr2	gffcl	locus	78979903	78980492	.	-	.	ID=RLOC_00018796;geneIDs=FBgn0022943.2.path1;transcripts=FBgn0022943.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78979903	78980492	.	-	.	ID=FBgn0022943.2.mrna1;geneID=FBgn0022943.2.path1;Name=FBgn0022943.2;Dir=sensecoverage=100.0;identity=100.0;matches=477;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018796
Chr2	stalkie_big_nohaplotig	exon	78979903	78980098	100	-	.	Parent=FBgn0022943.2.mrna1;Target=FBgn0022943.2 282 477 +
Chr2	stalkie_big_nohaplotig	exon	78980161	78980378	100	-	.	Parent=FBgn0022943.2.mrna1;Target=FBgn0022943.2 64 281 +
Chr2	stalkie_big_nohaplotig	exon	78980430	78980492	100	-	.	Parent=FBgn0022943.2.mrna1;Target=FBgn0022943.2 1 63 +
Chr2	stalkie_big_nohaplotig	CDS	78979903	78980098	.	-	1	Parent=FBgn0022943.2.mrna1;Target=FBgn0022943.2 282 477 +
Chr2	stalkie_big_nohaplotig	CDS	78980161	78980378	.	-	0	Parent=FBgn0022943.2.mrna1;Target=FBgn0022943.2 64 281 +
Chr2	stalkie_big_nohaplotig	CDS	78980430	78980492	.	-	0	Parent=FBgn0022943.2.mrna1;Target=FBgn0022943.2 1 63 +
Chr2	gffcl	locus	78980845	78982404	.	+	.	ID=RLOC_00018797;geneIDs=FBgn0039204.1.path1;transcripts=FBgn0039204.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78980845	78982404	.	+	.	ID=FBgn0039204.1.mrna1;geneID=FBgn0039204.1.path1;Name=FBgn0039204.1;Dir=sensecoverage=100.0;identity=99.8;matches=1267;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018797
Chr2	stalkie_big_nohaplotig	exon	78980845	78980910	100	+	.	Parent=FBgn0039204.1.mrna1;Target=FBgn0039204.1 1 66 +
Chr2	stalkie_big_nohaplotig	exon	78980969	78981331	99	+	.	Parent=FBgn0039204.1.mrna1;Target=FBgn0039204.1 67 429 +
Chr2	stalkie_big_nohaplotig	exon	78981391	78981570	100	+	.	Parent=FBgn0039204.1.mrna1;Target=FBgn0039204.1 430 609 +
Chr2	stalkie_big_nohaplotig	exon	78981630	78981943	99	+	.	Parent=FBgn0039204.1.mrna1;Target=FBgn0039204.1 610 923 +
Chr2	stalkie_big_nohaplotig	exon	78981996	78982254	100	+	.	Parent=FBgn0039204.1.mrna1;Target=FBgn0039204.1 924 1182 +
Chr2	stalkie_big_nohaplotig	exon	78982318	78982404	100	+	.	Parent=FBgn0039204.1.mrna1;Target=FBgn0039204.1 1183 1269 +
Chr2	stalkie_big_nohaplotig	CDS	78980845	78980910	.	+	0	Parent=FBgn0039204.1.mrna1;Target=FBgn0039204.1 1 66 +
Chr2	stalkie_big_nohaplotig	CDS	78980969	78981331	.	+	0	Parent=FBgn0039204.1.mrna1;Target=FBgn0039204.1 67 429 +
Chr2	stalkie_big_nohaplotig	CDS	78981391	78981570	.	+	0	Parent=FBgn0039204.1.mrna1;Target=FBgn0039204.1 430 609 +
Chr2	stalkie_big_nohaplotig	CDS	78981630	78981943	.	+	0	Parent=FBgn0039204.1.mrna1;Target=FBgn0039204.1 610 923 +
Chr2	stalkie_big_nohaplotig	CDS	78981996	78982254	.	+	1	Parent=FBgn0039204.1.mrna1;Target=FBgn0039204.1 924 1182 +
Chr2	stalkie_big_nohaplotig	CDS	78982318	78982404	.	+	0	Parent=FBgn0039204.1.mrna1;Target=FBgn0039204.1 1183 1269 +
Chr2	gffcl	locus	78983300	78983818	.	-	.	ID=RLOC_00018798;geneIDs=FBgn0039205.1.path1;transcripts=FBgn0039205.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78983300	78983818	.	-	.	ID=FBgn0039205.1.mrna1;geneID=FBgn0039205.1.path1;Name=FBgn0039205.1;Dir=sensecoverage=100.0;identity=99.4;matches=465;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018798
Chr2	stalkie_big_nohaplotig	exon	78983300	78983720	99	-	.	Parent=FBgn0039205.1.mrna1;Target=FBgn0039205.1 48 468 +
Chr2	stalkie_big_nohaplotig	exon	78983772	78983818	97	-	.	Parent=FBgn0039205.1.mrna1;Target=FBgn0039205.1 1 47 +
Chr2	stalkie_big_nohaplotig	CDS	78983300	78983720	.	-	1	Parent=FBgn0039205.1.mrna1;Target=FBgn0039205.1 48 468 +
Chr2	stalkie_big_nohaplotig	CDS	78983772	78983818	.	-	0	Parent=FBgn0039205.1.mrna1;Target=FBgn0039205.1 1 47 +
Chr2	gffcl	locus	78984087	78985102	.	+	.	ID=RLOC_00018799;geneIDs=FBgn0037543.1.path1;transcripts=FBgn0037543.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78984087	78985102	.	+	.	ID=FBgn0037543.1.mrna1;geneID=FBgn0037543.1.path1;Name=FBgn0037543.1;Dir=sensecoverage=100.0;identity=100.0;matches=837;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018799
Chr2	stalkie_big_nohaplotig	exon	78984087	78984137	100	+	.	Parent=FBgn0037543.1.mrna1;Target=FBgn0037543.1 1 51 +
Chr2	stalkie_big_nohaplotig	exon	78984193	78984230	100	+	.	Parent=FBgn0037543.1.mrna1;Target=FBgn0037543.1 52 89 +
Chr2	stalkie_big_nohaplotig	exon	78984294	78984856	100	+	.	Parent=FBgn0037543.1.mrna1;Target=FBgn0037543.1 90 652 +
Chr2	stalkie_big_nohaplotig	exon	78984918	78985102	100	+	.	Parent=FBgn0037543.1.mrna1;Target=FBgn0037543.1 653 837 +
Chr2	stalkie_big_nohaplotig	CDS	78984087	78984137	.	+	0	Parent=FBgn0037543.1.mrna1;Target=FBgn0037543.1 1 51 +
Chr2	stalkie_big_nohaplotig	CDS	78984193	78984230	.	+	0	Parent=FBgn0037543.1.mrna1;Target=FBgn0037543.1 52 89 +
Chr2	stalkie_big_nohaplotig	CDS	78984294	78984856	.	+	1	Parent=FBgn0037543.1.mrna1;Target=FBgn0037543.1 90 652 +
Chr2	stalkie_big_nohaplotig	CDS	78984918	78985102	.	+	2	Parent=FBgn0037543.1.mrna1;Target=FBgn0037543.1 653 837 +
Chr2	gffcl	locus	78985193	78985968	.	-	.	ID=RLOC_00018800;geneIDs=FBgn0037544.1.path1;transcripts=FBgn0037544.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78985193	78985968	.	-	.	ID=FBgn0037544.1.mrna1;geneID=FBgn0037544.1.path1;Name=FBgn0037544.1;Dir=sensecoverage=99.4;identity=99.9;matches=715;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018800
Chr2	stalkie_big_nohaplotig	exon	78985193	78985580	100	-	.	Parent=FBgn0037544.1.mrna1;Target=FBgn0037544.1 329 716 +
Chr2	stalkie_big_nohaplotig	exon	78985641	78985968	99	-	.	Parent=FBgn0037544.1.mrna1;Target=FBgn0037544.1 1 328 +
Chr2	stalkie_big_nohaplotig	CDS	78985195	78985580	.	-	2	Parent=FBgn0037544.1.mrna1;Target=FBgn0037544.1 329 714 +
Chr2	stalkie_big_nohaplotig	CDS	78985641	78985968	.	-	0	Parent=FBgn0037544.1.mrna1;Target=FBgn0037544.1 1 328 +
Chr2	gffcl	locus	78986641	78989691	.	+	.	ID=RLOC_00018801;geneIDs=FBgn0010812.1.path1;transcripts=FBgn0010812.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	78986641	78989691	.	+	.	ID=FBgn0010812.1.mrna1;geneID=FBgn0010812.1.path1;Name=FBgn0010812.1;Dir=sensecoverage=100.0;identity=99.8;matches=2855;mismatches=7;indels=0;unknowns=0;locus=RLOC_00018801
Chr2	stalkie_big_nohaplotig	exon	78986641	78987093	99	+	.	Parent=FBgn0010812.1.mrna1;Target=FBgn0010812.1 1 453 +
Chr2	stalkie_big_nohaplotig	exon	78987152	78987998	99	+	.	Parent=FBgn0010812.1.mrna1;Target=FBgn0010812.1 454 1300 +
Chr2	stalkie_big_nohaplotig	exon	78988064	78988849	100	+	.	Parent=FBgn0010812.1.mrna1;Target=FBgn0010812.1 1301 2086 +
Chr2	stalkie_big_nohaplotig	exon	78988916	78989691	99	+	.	Parent=FBgn0010812.1.mrna1;Target=FBgn0010812.1 2087 2862 +
Chr2	stalkie_big_nohaplotig	CDS	78986641	78987093	.	+	0	Parent=FBgn0010812.1.mrna1;Target=FBgn0010812.1 1 453 +
Chr2	stalkie_big_nohaplotig	CDS	78987152	78987998	.	+	0	Parent=FBgn0010812.1.mrna1;Target=FBgn0010812.1 454 1300 +
Chr2	stalkie_big_nohaplotig	CDS	78988064	78988849	.	+	2	Parent=FBgn0010812.1.mrna1;Target=FBgn0010812.1 1301 2086 +
Chr2	stalkie_big_nohaplotig	CDS	78988916	78989691	.	+	2	Parent=FBgn0010812.1.mrna1;Target=FBgn0010812.1 2087 2862 +
Chr2	gffcl	locus	79048651	79049094	.	-	.	ID=RLOC_00018802;geneIDs=comp71650_c0_seq1.path1;transcripts=comp71650_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79048651	79049094	.	-	.	ID=comp71650_c0_seq1.mrna1;geneID=comp71650_c0_seq1.path1;Name=comp71650_c0_seq1;Dir=indeterminatecoverage=97.6;identity=99.8;matches=443;mismatches=1;indels=0;unknowns=0;Target=comp71650_c0_seq1 455 12 .;CDS_Target=comp71650_c0_seq1 454 236 .;locus=RLOC_00018802
Chr2	stalkie_big_nohaplotig	exon	79048651	79049094	99	-	.	Parent=comp71650_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	79048652	79048870	.	-	0	Parent=comp71650_c0_seq1.mrna1
Chr2	gffcl	locus	79097701	79098594	.	-	.	ID=RLOC_00018804;geneIDs=ORF2236.path1;transcripts=ORF2236.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79097701	79098594	.	-	.	ID=ORF2236.mrna1;geneID=ORF2236.path1;Name=ORF2236;Dir=indeterminatecoverage=100.0;identity=98.0;matches=876;mismatches=18;indels=0;unknowns=0;Target=ORF2236 894 1 .;locus=RLOC_00018804
Chr2	stalkie_big_nohaplotig	exon	79097701	79098594	97	-	.	Parent=ORF2236.mrna1
Chr2	stalkie_big_nohaplotig	CDS	79097701	79098594	.	-	0	Parent=ORF2236.mrna1
Chr2	gffcl	locus	79101472	79361407	.	-	.	ID=RLOC_00018805;geneIDs=FBgn0042094.2.path2,comp162097_c1_seq1.path1;transcripts=comp162097_c1_seq1.mrna1,FBgn0042094.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	79101472	79361407	.	-	.	ID=comp162097_c1_seq1.mrna1;geneID=comp162097_c1_seq1.path1;Name=comp162097_c1_seq1;Dir=indeterminatecoverage=56.1;identity=91.3;matches=401;mismatches=12;indels=26;unknowns=0;locus=RLOC_00018805
Chr2	stalkie_big_nohaplotig	exon	79101472	79101481	100	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 815 806 .
Chr2	stalkie_big_nohaplotig	exon	79108237	79108239	100	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 805 803 .
Chr2	stalkie_big_nohaplotig	exon	79110726	79110727	100	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 802 801 .
Chr2	stalkie_big_nohaplotig	exon	79115096	79115098	100	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 800 798 .
Chr2	stalkie_big_nohaplotig	exon	79120736	79120743	87	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 797 790 .
Chr2	stalkie_big_nohaplotig	exon	79123695	79123704	100	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 789 780 .
Chr2	stalkie_big_nohaplotig	exon	79125339	79125340	100	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 779 778 .
Chr2	stalkie_big_nohaplotig	exon	79125873	79125881	100	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 777 769 .
Chr2	stalkie_big_nohaplotig	exon	79131056	79131065	50	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 768 753 .
Chr2	stalkie_big_nohaplotig	exon	79138297	79138303	100	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 752 746 .
Chr2	stalkie_big_nohaplotig	exon	79150761	79150767	85	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 745 739 .
Chr2	stalkie_big_nohaplotig	exon	79165507	79165515	100	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 738 730 .
Chr2	stalkie_big_nohaplotig	exon	79170877	79170880	100	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 677 674 .
Chr2	stalkie_big_nohaplotig	exon	79192185	79192196	91	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 673 663 .
Chr2	stalkie_big_nohaplotig	exon	79197568	79197570	100	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 662 660 .
Chr2	stalkie_big_nohaplotig	exon	79200636	79200640	100	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 659 655 .
Chr2	stalkie_big_nohaplotig	exon	79205270	79205275	100	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 654 649 .
Chr2	stalkie_big_nohaplotig	exon	79217492	79217496	100	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 648 644 .
Chr2	stalkie_big_nohaplotig	exon	79228107	79228112	100	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 643 638 .
Chr2	stalkie_big_nohaplotig	exon	79257443	79257446	100	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 637 634 .
Chr2	stalkie_big_nohaplotig	exon	79313869	79314090	100	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 633 412 .
Chr2	stalkie_big_nohaplotig	exon	79346816	79346825	80	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 411 402 .
Chr2	stalkie_big_nohaplotig	exon	79347088	79347096	88	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 401 393 .
Chr2	stalkie_big_nohaplotig	exon	79350496	79350503	100	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 392 385 .
Chr2	stalkie_big_nohaplotig	exon	79355483	79355497	53	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 384 377 .
Chr2	stalkie_big_nohaplotig	exon	79355784	79355804	48	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 376 344 .
Chr2	stalkie_big_nohaplotig	exon	79361398	79361407	100	-	.	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 343 334 .
Chr2	stalkie_big_nohaplotig	CDS	79314076	79314090	.	-	2	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 426 412 .
Chr2	stalkie_big_nohaplotig	CDS	79346816	79346825	.	-	0	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 411 402 .
Chr2	stalkie_big_nohaplotig	CDS	79347088	79347096	.	-	0	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 401 393 .
Chr2	stalkie_big_nohaplotig	CDS	79350496	79350503	.	-	2	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 392 385 .
Chr2	stalkie_big_nohaplotig	CDS	79355483	79355497	.	-	2	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 384 377 .
Chr2	stalkie_big_nohaplotig	CDS	79355784	79355787	.	-	0	Parent=comp162097_c1_seq1.mrna1;Target=comp162097_c1_seq1 376 373 .
Chr2	stalkie_big_nohaplotig	mRNA	79346120	79346923	.	-	.	ID=FBgn0042094.2.mrna2;geneID=FBgn0042094.2.path2;Name=FBgn0042094.2;Dir=indeterminatecoverage=100.0;identity=99.9;matches=803;mismatches=1;indels=0;unknowns=0;Target=FBgn0042094.2 804 1 .;locus=RLOC_00018805
Chr2	stalkie_big_nohaplotig	exon	79346120	79346923	99	-	.	Parent=FBgn0042094.2.mrna2
Chr2	stalkie_big_nohaplotig	CDS	79346120	79346923	.	-	0	Parent=FBgn0042094.2.mrna2
Chr2	gffcl	locus	79167926	79168298	.	+	.	ID=RLOC_00018807;geneIDs=comp146730_c0_seq1.path1;transcripts=comp146730_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79167926	79168298	.	+	.	ID=comp146730_c0_seq1.mrna1;geneID=comp146730_c0_seq1.path1;Name=comp146730_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=372;mismatches=1;indels=0;unknowns=0;Target=comp146730_c0_seq1 374 2 .;CDS_Target=comp146730_c0_seq1 74 3 .;locus=RLOC_00018807
Chr2	stalkie_big_nohaplotig	exon	79167926	79168298	99	+	.	Parent=comp146730_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	79167927	79167998	.	+	0	Parent=comp146730_c0_seq1.mrna1
Chr2	gffcl	locus	79172090	79179596	.	+	.	ID=RLOC_00018808;geneIDs=FBgn0037622.1.path1;transcripts=FBgn0037622.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79172090	79179596	.	+	.	ID=FBgn0037622.1.mrna1;geneID=FBgn0037622.1.path1;Name=FBgn0037622.1;Dir=sensecoverage=100.0;identity=99.8;matches=2932;mismatches=5;indels=0;unknowns=0;locus=RLOC_00018808
Chr2	stalkie_big_nohaplotig	exon	79172090	79172124	94	+	.	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 1 35 +
Chr2	stalkie_big_nohaplotig	exon	79172328	79172418	100	+	.	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 36 126 +
Chr2	stalkie_big_nohaplotig	exon	79172475	79172669	100	+	.	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 127 321 +
Chr2	stalkie_big_nohaplotig	exon	79172732	79172897	100	+	.	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 322 487 +
Chr2	stalkie_big_nohaplotig	exon	79172952	79173285	99	+	.	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 488 821 +
Chr2	stalkie_big_nohaplotig	exon	79173528	79173677	100	+	.	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 822 971 +
Chr2	stalkie_big_nohaplotig	exon	79174721	79174889	100	+	.	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 972 1140 +
Chr2	stalkie_big_nohaplotig	exon	79174968	79175134	100	+	.	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 1141 1307 +
Chr2	stalkie_big_nohaplotig	exon	79175193	79175475	100	+	.	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 1308 1590 +
Chr2	stalkie_big_nohaplotig	exon	79175538	79175681	100	+	.	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 1591 1734 +
Chr2	stalkie_big_nohaplotig	exon	79175741	79175907	100	+	.	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 1735 1901 +
Chr2	stalkie_big_nohaplotig	exon	79175960	79176315	100	+	.	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 1902 2257 +
Chr2	stalkie_big_nohaplotig	exon	79176368	79176507	100	+	.	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 2258 2397 +
Chr2	stalkie_big_nohaplotig	exon	79176584	79176749	99	+	.	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 2398 2563 +
Chr2	stalkie_big_nohaplotig	exon	79179144	79179412	100	+	.	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 2564 2832 +
Chr2	stalkie_big_nohaplotig	exon	79179492	79179596	100	+	.	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 2833 2937 +
Chr2	stalkie_big_nohaplotig	CDS	79172090	79172124	.	+	0	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 1 35 +
Chr2	stalkie_big_nohaplotig	CDS	79172328	79172418	.	+	1	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 36 126 +
Chr2	stalkie_big_nohaplotig	CDS	79172475	79172669	.	+	0	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 127 321 +
Chr2	stalkie_big_nohaplotig	CDS	79172732	79172897	.	+	0	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 322 487 +
Chr2	stalkie_big_nohaplotig	CDS	79172952	79173285	.	+	2	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 488 821 +
Chr2	stalkie_big_nohaplotig	CDS	79173528	79173677	.	+	1	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 822 971 +
Chr2	stalkie_big_nohaplotig	CDS	79174721	79174889	.	+	1	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 972 1140 +
Chr2	stalkie_big_nohaplotig	CDS	79174968	79175134	.	+	0	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 1141 1307 +
Chr2	stalkie_big_nohaplotig	CDS	79175193	79175475	.	+	1	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 1308 1590 +
Chr2	stalkie_big_nohaplotig	CDS	79175538	79175681	.	+	0	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 1591 1734 +
Chr2	stalkie_big_nohaplotig	CDS	79175741	79175907	.	+	0	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 1735 1901 +
Chr2	stalkie_big_nohaplotig	CDS	79175960	79176315	.	+	1	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 1902 2257 +
Chr2	stalkie_big_nohaplotig	CDS	79176368	79176507	.	+	2	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 2258 2397 +
Chr2	stalkie_big_nohaplotig	CDS	79176584	79176749	.	+	0	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 2398 2563 +
Chr2	stalkie_big_nohaplotig	CDS	79179144	79179412	.	+	2	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 2564 2832 +
Chr2	stalkie_big_nohaplotig	CDS	79179492	79179596	.	+	0	Parent=FBgn0037622.1.mrna1;Target=FBgn0037622.1 2833 2937 +
Chr2	gffcl	locus	79187250	79187601	.	+	.	ID=RLOC_00018809;geneIDs=comp833726_c0_seq1.path1;transcripts=comp833726_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79187250	79187601	.	+	.	ID=comp833726_c0_seq1.mrna1;geneID=comp833726_c0_seq1.path1;Name=comp833726_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=352;mismatches=0;indels=0;unknowns=0;Target=comp833726_c0_seq1 352 1 .;CDS_Target=comp833726_c0_seq1 93 1 .;locus=RLOC_00018809
Chr2	stalkie_big_nohaplotig	exon	79187250	79187601	100	+	.	Parent=comp833726_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	79187250	79187342	.	+	0	Parent=comp833726_c0_seq1.mrna1
Chr2	gffcl	locus	79214303	79214350	.	-	.	ID=RLOC_00018810;geneIDs=comp140269_c0_seq1.path1;transcripts=comp140269_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79214303	79214350	.	-	.	ID=comp140269_c0_seq1.mrna1;geneID=comp140269_c0_seq1.path1;Name=comp140269_c0_seq1;Dir=indeterminatecoverage=11.0;identity=97.9;matches=47;mismatches=1;indels=0;unknowns=0;Target=comp140269_c0_seq1 60 13 .;CDS_Target=comp140269_c0_seq1 60 15 .;locus=RLOC_00018810
Chr2	stalkie_big_nohaplotig	exon	79214303	79214350	97	-	.	Parent=comp140269_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	79214303	79214348	.	-	0	Parent=comp140269_c0_seq1.mrna1
Chr2	gffcl	locus	79225258	79226061	.	+	.	ID=RLOC_00018811;geneIDs=FBgn0042094.2.path1;transcripts=FBgn0042094.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79225258	79226061	.	+	.	ID=FBgn0042094.2.mrna1;geneID=FBgn0042094.2.path1;Name=FBgn0042094.2;Dir=indeterminatecoverage=100.0;identity=99.9;matches=803;mismatches=1;indels=0;unknowns=0;Target=FBgn0042094.2 804 1 .;locus=RLOC_00018811
Chr2	stalkie_big_nohaplotig	exon	79225258	79226061	99	+	.	Parent=FBgn0042094.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	79225258	79226061	.	+	0	Parent=FBgn0042094.2.mrna1
Chr2	gffcl	locus	79226293	79226964	.	+	.	ID=RLOC_00018812;geneIDs=FBgn0042094.3.path1;transcripts=FBgn0042094.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79226293	79226964	.	+	.	ID=FBgn0042094.3.mrna1;geneID=FBgn0042094.3.path1;Name=FBgn0042094.3;Dir=indeterminatecoverage=100.0;identity=99.7;matches=670;mismatches=2;indels=0;unknowns=0;Target=FBgn0042094.3 672 1 .;locus=RLOC_00018812
Chr2	stalkie_big_nohaplotig	exon	79226293	79226964	99	+	.	Parent=FBgn0042094.3.mrna1
Chr2	stalkie_big_nohaplotig	CDS	79226293	79226964	.	+	0	Parent=FBgn0042094.3.mrna1
Chr2	gffcl	locus	79229867	79230625	.	+	.	ID=RLOC_00018813;geneIDs=FBgn0042094.1.path1;transcripts=FBgn0042094.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79229867	79230625	.	+	.	ID=FBgn0042094.1.mrna1;geneID=FBgn0042094.1.path1;Name=FBgn0042094.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=756;mismatches=3;indels=0;unknowns=0;Target=FBgn0042094.1 759 1 .;locus=RLOC_00018813
Chr2	stalkie_big_nohaplotig	exon	79229867	79230625	99	+	.	Parent=FBgn0042094.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	79229867	79230625	.	+	0	Parent=FBgn0042094.1.mrna1
Chr2	gffcl	locus	79233335	79233470	.	-	.	ID=RLOC_00018814;geneIDs=FBgn0037856.1.path1;transcripts=FBgn0037856.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79233335	79233470	.	-	.	ID=FBgn0037856.1.mrna1;geneID=FBgn0037856.1.path1;Name=FBgn0037856.1;Dir=indeterminatecoverage=9.1;identity=99.3;matches=135;mismatches=1;indels=0;unknowns=0;Target=FBgn0037856.1 136 1 .;locus=RLOC_00018814
Chr2	stalkie_big_nohaplotig	exon	79233335	79233470	99	-	.	Parent=FBgn0037856.1.mrna1
Chr2	gffcl	locus	79237958	79243842	.	+	.	ID=RLOC_00018815;geneIDs=FBgn0037853.1.path1;transcripts=FBgn0037853.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79237958	79243842	.	+	.	ID=FBgn0037853.1.mrna1;geneID=FBgn0037853.1.path1;Name=FBgn0037853.1;Dir=sensecoverage=100.0;identity=99.7;matches=1424;mismatches=4;indels=0;unknowns=0;locus=RLOC_00018815
Chr2	stalkie_big_nohaplotig	exon	79237958	79238078	100	+	.	Parent=FBgn0037853.1.mrna1;Target=FBgn0037853.1 1 121 +
Chr2	stalkie_big_nohaplotig	exon	79242403	79242770	100	+	.	Parent=FBgn0037853.1.mrna1;Target=FBgn0037853.1 122 489 +
Chr2	stalkie_big_nohaplotig	exon	79242836	79243358	99	+	.	Parent=FBgn0037853.1.mrna1;Target=FBgn0037853.1 490 1012 +
Chr2	stalkie_big_nohaplotig	exon	79243427	79243842	100	+	.	Parent=FBgn0037853.1.mrna1;Target=FBgn0037853.1 1013 1428 +
Chr2	stalkie_big_nohaplotig	CDS	79237958	79238078	.	+	0	Parent=FBgn0037853.1.mrna1;Target=FBgn0037853.1 1 121 +
Chr2	stalkie_big_nohaplotig	CDS	79242403	79242770	.	+	2	Parent=FBgn0037853.1.mrna1;Target=FBgn0037853.1 122 489 +
Chr2	stalkie_big_nohaplotig	CDS	79242836	79243358	.	+	0	Parent=FBgn0037853.1.mrna1;Target=FBgn0037853.1 490 1012 +
Chr2	stalkie_big_nohaplotig	CDS	79243427	79243842	.	+	2	Parent=FBgn0037853.1.mrna1;Target=FBgn0037853.1 1013 1428 +
Chr2	gffcl	locus	79255332	79256439	.	+	.	ID=RLOC_00018816;geneIDs=FBgn0037852.2.path1;transcripts=FBgn0037852.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79255332	79256439	.	+	.	ID=FBgn0037852.2.mrna1;geneID=FBgn0037852.2.path1;Name=FBgn0037852.2;Dir=sensecoverage=100.0;identity=99.2;matches=1033;mismatches=8;indels=0;unknowns=0;locus=RLOC_00018816
Chr2	stalkie_big_nohaplotig	exon	79255332	79256068	99	+	.	Parent=FBgn0037852.2.mrna1;Target=FBgn0037852.2 1 737 +
Chr2	stalkie_big_nohaplotig	exon	79256136	79256439	99	+	.	Parent=FBgn0037852.2.mrna1;Target=FBgn0037852.2 738 1041 +
Chr2	stalkie_big_nohaplotig	CDS	79255332	79256068	.	+	0	Parent=FBgn0037852.2.mrna1;Target=FBgn0037852.2 1 737 +
Chr2	stalkie_big_nohaplotig	CDS	79256136	79256439	.	+	1	Parent=FBgn0037852.2.mrna1;Target=FBgn0037852.2 738 1041 +
Chr2	gffcl	locus	79259172	79260251	.	+	.	ID=RLOC_00018817;geneIDs=FBgn0015351.1.path1;transcripts=FBgn0015351.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79259172	79260251	.	+	.	ID=FBgn0015351.1.mrna1;geneID=FBgn0015351.1.path1;Name=FBgn0015351.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1078;mismatches=2;indels=0;unknowns=0;Target=FBgn0015351.1 1080 1 .;locus=RLOC_00018817
Chr2	stalkie_big_nohaplotig	exon	79259172	79260251	99	+	.	Parent=FBgn0015351.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	79259172	79260251	.	+	0	Parent=FBgn0015351.1.mrna1
Chr2	gffcl	locus	79260468	79262389	.	-	.	ID=RLOC_00018818;geneIDs=FBgn0015019.1.path1;transcripts=FBgn0015019.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79260468	79262389	.	-	.	ID=FBgn0015019.1.mrna1;geneID=FBgn0015019.1.path1;Name=FBgn0015019.1;Dir=sensecoverage=100.0;identity=99.8;matches=1640;mismatches=4;indels=0;unknowns=0;locus=RLOC_00018818
Chr2	stalkie_big_nohaplotig	exon	79260468	79260688	100	-	.	Parent=FBgn0015019.1.mrna1;Target=FBgn0015019.1 1424 1644 +
Chr2	stalkie_big_nohaplotig	exon	79260756	79261570	99	-	.	Parent=FBgn0015019.1.mrna1;Target=FBgn0015019.1 609 1423 +
Chr2	stalkie_big_nohaplotig	exon	79261626	79262125	100	-	.	Parent=FBgn0015019.1.mrna1;Target=FBgn0015019.1 109 608 +
Chr2	stalkie_big_nohaplotig	exon	79262224	79262285	100	-	.	Parent=FBgn0015019.1.mrna1;Target=FBgn0015019.1 47 108 +
Chr2	stalkie_big_nohaplotig	exon	79262344	79262389	100	-	.	Parent=FBgn0015019.1.mrna1;Target=FBgn0015019.1 1 46 +
Chr2	stalkie_big_nohaplotig	CDS	79260468	79260688	.	-	2	Parent=FBgn0015019.1.mrna1;Target=FBgn0015019.1 1424 1644 +
Chr2	stalkie_big_nohaplotig	CDS	79260756	79261570	.	-	1	Parent=FBgn0015019.1.mrna1;Target=FBgn0015019.1 609 1423 +
Chr2	stalkie_big_nohaplotig	CDS	79261626	79262125	.	-	0	Parent=FBgn0015019.1.mrna1;Target=FBgn0015019.1 109 608 +
Chr2	stalkie_big_nohaplotig	CDS	79262224	79262285	.	-	2	Parent=FBgn0015019.1.mrna1;Target=FBgn0015019.1 47 108 +
Chr2	stalkie_big_nohaplotig	CDS	79262344	79262389	.	-	0	Parent=FBgn0015019.1.mrna1;Target=FBgn0015019.1 1 46 +
Chr2	gffcl	locus	79263577	79264688	.	+	.	ID=RLOC_00018819;geneIDs=FBgn0038585.1.path1;transcripts=FBgn0038585.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79263577	79264688	.	+	.	ID=FBgn0038585.1.mrna1;geneID=FBgn0038585.1.path1;Name=FBgn0038585.1;Dir=sensecoverage=100.0;identity=99.3;matches=980;mismatches=7;indels=0;unknowns=0;locus=RLOC_00018819
Chr2	stalkie_big_nohaplotig	exon	79263577	79263641	98	+	.	Parent=FBgn0038585.1.mrna1;Target=FBgn0038585.1 1 65 +
Chr2	stalkie_big_nohaplotig	exon	79263697	79263912	100	+	.	Parent=FBgn0038585.1.mrna1;Target=FBgn0038585.1 66 281 +
Chr2	stalkie_big_nohaplotig	exon	79263983	79264688	99	+	.	Parent=FBgn0038585.1.mrna1;Target=FBgn0038585.1 282 987 +
Chr2	stalkie_big_nohaplotig	CDS	79263577	79263641	.	+	0	Parent=FBgn0038585.1.mrna1;Target=FBgn0038585.1 1 65 +
Chr2	stalkie_big_nohaplotig	CDS	79263697	79263912	.	+	1	Parent=FBgn0038585.1.mrna1;Target=FBgn0038585.1 66 281 +
Chr2	stalkie_big_nohaplotig	CDS	79263983	79264688	.	+	1	Parent=FBgn0038585.1.mrna1;Target=FBgn0038585.1 282 987 +
Chr2	gffcl	locus	79264831	79265505	.	-	.	ID=RLOC_00018820;geneIDs=FBgn0038586.1.path1;transcripts=FBgn0038586.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79264831	79265505	.	-	.	ID=FBgn0038586.1.mrna1;geneID=FBgn0038586.1.path1;Name=FBgn0038586.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=672;mismatches=3;indels=0;unknowns=0;Target=FBgn0038586.1 675 1 .;locus=RLOC_00018820
Chr2	stalkie_big_nohaplotig	exon	79264831	79265505	99	-	.	Parent=FBgn0038586.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	79264831	79265505	.	-	0	Parent=FBgn0038586.1.mrna1
Chr2	gffcl	locus	79266894	79269365	.	+	.	ID=RLOC_00018821;geneIDs=FBgn0026056.1.path1;transcripts=FBgn0026056.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79266894	79269365	.	+	.	ID=FBgn0026056.1.mrna1;geneID=FBgn0026056.1.path1;Name=FBgn0026056.1;Dir=sensecoverage=100.0;identity=99.6;matches=1996;mismatches=8;indels=0;unknowns=0;locus=RLOC_00018821
Chr2	stalkie_big_nohaplotig	exon	79266894	79267038	100	+	.	Parent=FBgn0026056.1.mrna1;Target=FBgn0026056.1 1 145 +
Chr2	stalkie_big_nohaplotig	exon	79267114	79267252	100	+	.	Parent=FBgn0026056.1.mrna1;Target=FBgn0026056.1 146 284 +
Chr2	stalkie_big_nohaplotig	exon	79267314	79267865	99	+	.	Parent=FBgn0026056.1.mrna1;Target=FBgn0026056.1 285 836 +
Chr2	stalkie_big_nohaplotig	exon	79267922	79268230	99	+	.	Parent=FBgn0026056.1.mrna1;Target=FBgn0026056.1 837 1145 +
Chr2	stalkie_big_nohaplotig	exon	79268507	79269365	99	+	.	Parent=FBgn0026056.1.mrna1;Target=FBgn0026056.1 1146 2004 +
Chr2	stalkie_big_nohaplotig	CDS	79266894	79267038	.	+	0	Parent=FBgn0026056.1.mrna1;Target=FBgn0026056.1 1 145 +
Chr2	stalkie_big_nohaplotig	CDS	79267114	79267252	.	+	2	Parent=FBgn0026056.1.mrna1;Target=FBgn0026056.1 146 284 +
Chr2	stalkie_big_nohaplotig	CDS	79267314	79267865	.	+	1	Parent=FBgn0026056.1.mrna1;Target=FBgn0026056.1 285 836 +
Chr2	stalkie_big_nohaplotig	CDS	79267922	79268230	.	+	1	Parent=FBgn0026056.1.mrna1;Target=FBgn0026056.1 837 1145 +
Chr2	stalkie_big_nohaplotig	CDS	79268507	79269365	.	+	1	Parent=FBgn0026056.1.mrna1;Target=FBgn0026056.1 1146 2004 +
Chr2	gffcl	locus	79272802	79275003	.	+	.	ID=RLOC_00018822;geneIDs=FBgn0262559.1.path1;transcripts=FBgn0262559.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79272802	79275003	.	+	.	ID=FBgn0262559.1.mrna1;geneID=FBgn0262559.1.path1;Name=FBgn0262559.1;Dir=sensecoverage=100.0;identity=99.8;matches=1012;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018822
Chr2	stalkie_big_nohaplotig	exon	79272802	79272873	98	+	.	Parent=FBgn0262559.1.mrna1;Target=FBgn0262559.1 1 72 +
Chr2	stalkie_big_nohaplotig	exon	79273069	79273276	100	+	.	Parent=FBgn0262559.1.mrna1;Target=FBgn0262559.1 73 280 +
Chr2	stalkie_big_nohaplotig	exon	79274203	79274399	100	+	.	Parent=FBgn0262559.1.mrna1;Target=FBgn0262559.1 281 477 +
Chr2	stalkie_big_nohaplotig	exon	79274467	79275003	99	+	.	Parent=FBgn0262559.1.mrna1;Target=FBgn0262559.1 478 1014 +
Chr2	stalkie_big_nohaplotig	CDS	79272802	79272873	.	+	0	Parent=FBgn0262559.1.mrna1;Target=FBgn0262559.1 1 72 +
Chr2	stalkie_big_nohaplotig	CDS	79273069	79273276	.	+	0	Parent=FBgn0262559.1.mrna1;Target=FBgn0262559.1 73 280 +
Chr2	stalkie_big_nohaplotig	CDS	79274203	79274399	.	+	2	Parent=FBgn0262559.1.mrna1;Target=FBgn0262559.1 281 477 +
Chr2	stalkie_big_nohaplotig	CDS	79274467	79275003	.	+	0	Parent=FBgn0262559.1.mrna1;Target=FBgn0262559.1 478 1014 +
Chr2	gffcl	locus	79315738	79318271	.	-	.	ID=RLOC_00018824;geneIDs=FBgn0038588.1.path1;transcripts=FBgn0038588.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79315738	79318271	.	-	.	ID=FBgn0038588.1.mrna1;geneID=FBgn0038588.1.path1;Name=FBgn0038588.1;Dir=sensecoverage=100.0;identity=99.9;matches=2302;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018824
Chr2	stalkie_big_nohaplotig	exon	79315738	79315971	100	-	.	Parent=FBgn0038588.1.mrna1;Target=FBgn0038588.1 2071 2304 +
Chr2	stalkie_big_nohaplotig	exon	79316029	79316245	100	-	.	Parent=FBgn0038588.1.mrna1;Target=FBgn0038588.1 1854 2070 +
Chr2	stalkie_big_nohaplotig	exon	79316310	79317336	100	-	.	Parent=FBgn0038588.1.mrna1;Target=FBgn0038588.1 827 1853 +
Chr2	stalkie_big_nohaplotig	exon	79317386	79318109	99	-	.	Parent=FBgn0038588.1.mrna1;Target=FBgn0038588.1 103 826 +
Chr2	stalkie_big_nohaplotig	exon	79318170	79318271	100	-	.	Parent=FBgn0038588.1.mrna1;Target=FBgn0038588.1 1 102 +
Chr2	stalkie_big_nohaplotig	CDS	79315738	79315971	.	-	0	Parent=FBgn0038588.1.mrna1;Target=FBgn0038588.1 2071 2304 +
Chr2	stalkie_big_nohaplotig	CDS	79316029	79316245	.	-	1	Parent=FBgn0038588.1.mrna1;Target=FBgn0038588.1 1854 2070 +
Chr2	stalkie_big_nohaplotig	CDS	79316310	79317336	.	-	2	Parent=FBgn0038588.1.mrna1;Target=FBgn0038588.1 827 1853 +
Chr2	stalkie_big_nohaplotig	CDS	79317386	79318109	.	-	0	Parent=FBgn0038588.1.mrna1;Target=FBgn0038588.1 103 826 +
Chr2	stalkie_big_nohaplotig	CDS	79318170	79318271	.	-	0	Parent=FBgn0038588.1.mrna1;Target=FBgn0038588.1 1 102 +
Chr2	gffcl	locus	79320494	79331525	.	+	.	ID=RLOC_00018825;geneIDs=FBgn0020238.11.path1;transcripts=FBgn0020238.11.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79320494	79331525	.	+	.	ID=FBgn0020238.11.mrna1;geneID=FBgn0020238.11.path1;Name=FBgn0020238.11;Dir=sensecoverage=100.0;identity=100.0;matches=795;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018825
Chr2	stalkie_big_nohaplotig	exon	79320494	79320584	100	+	.	Parent=FBgn0020238.11.mrna1;Target=FBgn0020238.11 1 91 +
Chr2	stalkie_big_nohaplotig	exon	79328189	79328658	100	+	.	Parent=FBgn0020238.11.mrna1;Target=FBgn0020238.11 92 561 +
Chr2	stalkie_big_nohaplotig	exon	79328741	79328921	100	+	.	Parent=FBgn0020238.11.mrna1;Target=FBgn0020238.11 562 742 +
Chr2	stalkie_big_nohaplotig	exon	79331473	79331525	100	+	.	Parent=FBgn0020238.11.mrna1;Target=FBgn0020238.11 743 795 +
Chr2	stalkie_big_nohaplotig	CDS	79320494	79320584	.	+	0	Parent=FBgn0020238.11.mrna1;Target=FBgn0020238.11 1 91 +
Chr2	stalkie_big_nohaplotig	CDS	79328189	79328658	.	+	2	Parent=FBgn0020238.11.mrna1;Target=FBgn0020238.11 92 561 +
Chr2	stalkie_big_nohaplotig	CDS	79328741	79328921	.	+	0	Parent=FBgn0020238.11.mrna1;Target=FBgn0020238.11 562 742 +
Chr2	stalkie_big_nohaplotig	CDS	79331473	79331525	.	+	2	Parent=FBgn0020238.11.mrna1;Target=FBgn0020238.11 743 795 +
Chr2	gffcl	locus	79322340	79324183	.	-	.	ID=RLOC_00018826;geneIDs=comp149340_c0_seq1.path1;transcripts=comp149340_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79322340	79324183	.	-	.	ID=comp149340_c0_seq1.mrna1;geneID=comp149340_c0_seq1.path1;Name=comp149340_c0_seq1;Dir=antisensecoverage=99.2;identity=99.2;matches=392;mismatches=3;indels=0;unknowns=0;Target=comp149340_c0_seq1 283 336 .;locus=RLOC_00018826
Chr2	stalkie_big_nohaplotig	exon	79322340	79322607	98	-	.	Parent=comp149340_c0_seq1.mrna1;Target=comp149340_c0_seq1 4 271 -
Chr2	stalkie_big_nohaplotig	exon	79324057	79324183	100	-	.	Parent=comp149340_c0_seq1.mrna1;Target=comp149340_c0_seq1 272 398 -
Chr2	stalkie_big_nohaplotig	CDS	79324068	79324121	.	-	0	Parent=comp149340_c0_seq1.mrna1
Chr2	gffcl	locus	79332673	79334226	.	+	.	ID=RLOC_00018827;geneIDs=comp155694_c0_seq1.path1;transcripts=comp155694_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79332673	79334226	.	+	.	ID=comp155694_c0_seq1.mrna1;geneID=comp155694_c0_seq1.path1;Name=comp155694_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.5;matches=1552;mismatches=2;indels=6;unknowns=0;Target=comp155694_c0_seq1 1573 14 .;CDS_Target=comp155694_c0_seq1 676 521 .;locus=RLOC_00018827
Chr2	stalkie_big_nohaplotig	exon	79332673	79334226	99	+	.	Parent=comp155694_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	79333174	79333329	.	+	0	Parent=comp155694_c0_seq1.mrna1
Chr2	gffcl	locus	79347123	79350420	.	-	.	ID=RLOC_00018828;geneIDs=FBgn0037855.1.path1;transcripts=FBgn0037855.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79347123	79350420	.	-	.	ID=FBgn0037855.1.mrna1;geneID=FBgn0037855.1.path1;Name=FBgn0037855.1;Dir=sensecoverage=100.0;identity=99.0;matches=2589;mismatches=12;indels=15;unknowns=0;locus=RLOC_00018828
Chr2	stalkie_big_nohaplotig	exon	79347123	79347978	97	-	.	Parent=FBgn0037855.1.mrna1;Target=FBgn0037855.1 1755 2610 +
Chr2	stalkie_big_nohaplotig	exon	79348177	79348355	98	-	.	Parent=FBgn0037855.1.mrna1;Target=FBgn0037855.1 1573 1754 +
Chr2	stalkie_big_nohaplotig	exon	79348407	79348564	100	-	.	Parent=FBgn0037855.1.mrna1;Target=FBgn0037855.1 1415 1572 +
Chr2	stalkie_big_nohaplotig	exon	79348685	79348768	97	-	.	Parent=FBgn0037855.1.mrna1;Target=FBgn0037855.1 1331 1414 +
Chr2	stalkie_big_nohaplotig	exon	79348821	79349221	99	-	.	Parent=FBgn0037855.1.mrna1;Target=FBgn0037855.1 930 1330 +
Chr2	stalkie_big_nohaplotig	exon	79349288	79349497	100	-	.	Parent=FBgn0037855.1.mrna1;Target=FBgn0037855.1 720 929 +
Chr2	stalkie_big_nohaplotig	exon	79349567	79349778	99	-	.	Parent=FBgn0037855.1.mrna1;Target=FBgn0037855.1 508 719 +
Chr2	stalkie_big_nohaplotig	exon	79349834	79350051	99	-	.	Parent=FBgn0037855.1.mrna1;Target=FBgn0037855.1 290 507 +
Chr2	stalkie_big_nohaplotig	exon	79350132	79350420	100	-	.	Parent=FBgn0037855.1.mrna1;Target=FBgn0037855.1 1 289 +
Chr2	stalkie_big_nohaplotig	CDS	79347123	79347978	.	-	1	Parent=FBgn0037855.1.mrna1;Target=FBgn0037855.1 1755 2610 +
Chr2	stalkie_big_nohaplotig	CDS	79348177	79348355	.	-	0	Parent=FBgn0037855.1.mrna1;Target=FBgn0037855.1 1573 1754 +
Chr2	stalkie_big_nohaplotig	CDS	79348407	79348564	.	-	2	Parent=FBgn0037855.1.mrna1;Target=FBgn0037855.1 1415 1572 +
Chr2	stalkie_big_nohaplotig	CDS	79348685	79348768	.	-	2	Parent=FBgn0037855.1.mrna1;Target=FBgn0037855.1 1331 1414 +
Chr2	stalkie_big_nohaplotig	CDS	79348821	79349221	.	-	1	Parent=FBgn0037855.1.mrna1;Target=FBgn0037855.1 930 1330 +
Chr2	stalkie_big_nohaplotig	CDS	79349288	79349497	.	-	1	Parent=FBgn0037855.1.mrna1;Target=FBgn0037855.1 720 929 +
Chr2	stalkie_big_nohaplotig	CDS	79349567	79349778	.	-	0	Parent=FBgn0037855.1.mrna1;Target=FBgn0037855.1 508 719 +
Chr2	stalkie_big_nohaplotig	CDS	79349834	79350051	.	-	2	Parent=FBgn0037855.1.mrna1;Target=FBgn0037855.1 290 507 +
Chr2	stalkie_big_nohaplotig	CDS	79350132	79350420	.	-	0	Parent=FBgn0037855.1.mrna1;Target=FBgn0037855.1 1 289 +
Chr2	gffcl	locus	79353219	79356591	.	+	.	ID=RLOC_00018829;geneIDs=FBgn0037856.1.path2;transcripts=FBgn0037856.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	79353219	79356591	.	+	.	ID=FBgn0037856.1.mrna2;geneID=FBgn0037856.1.path2;Name=FBgn0037856.1;Dir=sensecoverage=90.9;identity=99.9;matches=1357;mismatches=1;indels=1;unknowns=0;locus=RLOC_00018829
Chr2	stalkie_big_nohaplotig	exon	79353219	79354521	99	+	.	Parent=FBgn0037856.1.mrna2;Target=FBgn0037856.1 137 1438 +
Chr2	stalkie_big_nohaplotig	exon	79356536	79356591	100	+	.	Parent=FBgn0037856.1.mrna2;Target=FBgn0037856.1 1439 1494 +
Chr2	stalkie_big_nohaplotig	CDS	79353264	79354521	.	+	0	Parent=FBgn0037856.1.mrna2;Target=FBgn0037856.1 181 1438 +
Chr2	stalkie_big_nohaplotig	CDS	79356536	79356591	.	+	2	Parent=FBgn0037856.1.mrna2;Target=FBgn0037856.1 1439 1494 +
Chr2	gffcl	locus	79359390	79360084	.	-	.	ID=RLOC_00018830;geneIDs=comp158529_c0_seq1.path1;transcripts=comp158529_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79359390	79360084	.	-	.	ID=comp158529_c0_seq1.mrna1;geneID=comp158529_c0_seq1.path1;Name=comp158529_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.7;matches=686;mismatches=9;indels=0;unknowns=0;Target=comp158529_c0_seq1 696 2 .;CDS_Target=comp158529_c0_seq1 695 387 .;locus=RLOC_00018830
Chr2	stalkie_big_nohaplotig	exon	79359390	79360084	98	-	.	Parent=comp158529_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	79359391	79359699	.	-	0	Parent=comp158529_c0_seq1.mrna1
Chr2	gffcl	locus	79380216	79385276	.	+	.	ID=RLOC_00018831;geneIDs=FBgn0037646.1.path1;transcripts=FBgn0037646.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79380216	79385276	.	+	.	ID=FBgn0037646.1.mrna1;geneID=FBgn0037646.1.path1;Name=FBgn0037646.1;Dir=sensecoverage=100.0;identity=99.4;matches=766;mismatches=5;indels=0;unknowns=0;locus=RLOC_00018831
Chr2	stalkie_big_nohaplotig	exon	79380216	79380314	100	+	.	Parent=FBgn0037646.1.mrna1;Target=FBgn0037646.1 1 99 +
Chr2	stalkie_big_nohaplotig	exon	79384347	79384431	100	+	.	Parent=FBgn0037646.1.mrna1;Target=FBgn0037646.1 100 184 +
Chr2	stalkie_big_nohaplotig	exon	79384530	79384717	99	+	.	Parent=FBgn0037646.1.mrna1;Target=FBgn0037646.1 185 372 +
Chr2	stalkie_big_nohaplotig	exon	79384878	79385276	98	+	.	Parent=FBgn0037646.1.mrna1;Target=FBgn0037646.1 373 771 +
Chr2	stalkie_big_nohaplotig	CDS	79380216	79380314	.	+	0	Parent=FBgn0037646.1.mrna1;Target=FBgn0037646.1 1 99 +
Chr2	stalkie_big_nohaplotig	CDS	79384347	79384431	.	+	0	Parent=FBgn0037646.1.mrna1;Target=FBgn0037646.1 100 184 +
Chr2	stalkie_big_nohaplotig	CDS	79384530	79384717	.	+	2	Parent=FBgn0037646.1.mrna1;Target=FBgn0037646.1 185 372 +
Chr2	stalkie_big_nohaplotig	CDS	79384878	79385276	.	+	0	Parent=FBgn0037646.1.mrna1;Target=FBgn0037646.1 373 771 +
Chr2	gffcl	locus	79385777	79389319	.	-	.	ID=RLOC_00018832;geneIDs=FBgn0037647.1.path1;transcripts=FBgn0037647.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79385777	79389319	.	-	.	ID=FBgn0037647.1.mrna1;geneID=FBgn0037647.1.path1;Name=FBgn0037647.1;Dir=sensecoverage=100.0;identity=99.4;matches=963;mismatches=6;indels=0;unknowns=0;locus=RLOC_00018832
Chr2	stalkie_big_nohaplotig	exon	79385777	79386206	99	-	.	Parent=FBgn0037647.1.mrna1;Target=FBgn0037647.1 540 969 +
Chr2	stalkie_big_nohaplotig	exon	79388602	79388768	98	-	.	Parent=FBgn0037647.1.mrna1;Target=FBgn0037647.1 373 539 +
Chr2	stalkie_big_nohaplotig	exon	79388827	79389044	98	-	.	Parent=FBgn0037647.1.mrna1;Target=FBgn0037647.1 155 372 +
Chr2	stalkie_big_nohaplotig	exon	79389101	79389200	100	-	.	Parent=FBgn0037647.1.mrna1;Target=FBgn0037647.1 55 154 +
Chr2	stalkie_big_nohaplotig	exon	79389266	79389319	100	-	.	Parent=FBgn0037647.1.mrna1;Target=FBgn0037647.1 1 54 +
Chr2	stalkie_big_nohaplotig	CDS	79385777	79386206	.	-	1	Parent=FBgn0037647.1.mrna1;Target=FBgn0037647.1 540 969 +
Chr2	stalkie_big_nohaplotig	CDS	79388602	79388768	.	-	0	Parent=FBgn0037647.1.mrna1;Target=FBgn0037647.1 373 539 +
Chr2	stalkie_big_nohaplotig	CDS	79388827	79389044	.	-	2	Parent=FBgn0037647.1.mrna1;Target=FBgn0037647.1 155 372 +
Chr2	stalkie_big_nohaplotig	CDS	79389101	79389200	.	-	0	Parent=FBgn0037647.1.mrna1;Target=FBgn0037647.1 55 154 +
Chr2	stalkie_big_nohaplotig	CDS	79389266	79389319	.	-	0	Parent=FBgn0037647.1.mrna1;Target=FBgn0037647.1 1 54 +
Chr2	gffcl	locus	79393560	79395950	.	+	.	ID=RLOC_00018833;geneIDs=FBgn0037721.1.path1;transcripts=FBgn0037721.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79393560	79395950	.	+	.	ID=FBgn0037721.1.mrna1;geneID=FBgn0037721.1.path1;Name=FBgn0037721.1;Dir=sensecoverage=100.0;identity=99.7;matches=670;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018833
Chr2	stalkie_big_nohaplotig	exon	79393560	79393691	99	+	.	Parent=FBgn0037721.1.mrna1;Target=FBgn0037721.1 1 132 +
Chr2	stalkie_big_nohaplotig	exon	79393770	79393901	100	+	.	Parent=FBgn0037721.1.mrna1;Target=FBgn0037721.1 133 264 +
Chr2	stalkie_big_nohaplotig	exon	79393966	79394127	100	+	.	Parent=FBgn0037721.1.mrna1;Target=FBgn0037721.1 265 426 +
Chr2	stalkie_big_nohaplotig	exon	79395551	79395688	99	+	.	Parent=FBgn0037721.1.mrna1;Target=FBgn0037721.1 427 564 +
Chr2	stalkie_big_nohaplotig	exon	79395843	79395950	100	+	.	Parent=FBgn0037721.1.mrna1;Target=FBgn0037721.1 565 672 +
Chr2	stalkie_big_nohaplotig	CDS	79393614	79393691	.	+	0	Parent=FBgn0037721.1.mrna1;Target=FBgn0037721.1 55 132 +
Chr2	stalkie_big_nohaplotig	CDS	79393770	79393901	.	+	0	Parent=FBgn0037721.1.mrna1;Target=FBgn0037721.1 133 264 +
Chr2	stalkie_big_nohaplotig	CDS	79393966	79394127	.	+	0	Parent=FBgn0037721.1.mrna1;Target=FBgn0037721.1 265 426 +
Chr2	stalkie_big_nohaplotig	CDS	79395551	79395688	.	+	0	Parent=FBgn0037721.1.mrna1;Target=FBgn0037721.1 427 564 +
Chr2	stalkie_big_nohaplotig	CDS	79395843	79395950	.	+	0	Parent=FBgn0037721.1.mrna1;Target=FBgn0037721.1 565 672 +
Chr2	gffcl	locus	79427969	79429570	.	+	.	ID=RLOC_00018834;geneIDs=FBgn0052645.path2,comp163620_c3_seq1.path2;transcripts=FBgn0052645.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	79427969	79429531	.	+	.	ID=FBgn0052645.mrna2;geneID=FBgn0052645.path2;Name=FBgn0052645;Dir=sensecoverage=100.0;identity=99.8;matches=1386;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018834
Chr2	stalkie_big_nohaplotig	exon	79427969	79428441	99	+	.	Parent=FBgn0052645.mrna2;Target=FBgn0052645 1 473 +
Chr2	stalkie_big_nohaplotig	exon	79428498	79428663	99	+	.	Parent=FBgn0052645.mrna2;Target=FBgn0052645 474 639 +
Chr2	stalkie_big_nohaplotig	exon	79428717	79429340	100	+	.	Parent=FBgn0052645.mrna2;Target=FBgn0052645 640 1263 +
Chr2	stalkie_big_nohaplotig	exon	79429406	79429531	100	+	.	Parent=FBgn0052645.mrna2;Target=FBgn0052645 1264 1389 +
Chr2	stalkie_big_nohaplotig	CDS	79427969	79428441	.	+	0	Parent=FBgn0052645.mrna2;Target=FBgn0052645 1 473 +
Chr2	stalkie_big_nohaplotig	CDS	79428498	79428663	.	+	1	Parent=FBgn0052645.mrna2;Target=FBgn0052645 474 639 +
Chr2	stalkie_big_nohaplotig	CDS	79428717	79429340	.	+	0	Parent=FBgn0052645.mrna2;Target=FBgn0052645 640 1263 +
Chr2	stalkie_big_nohaplotig	CDS	79429406	79429531	.	+	0	Parent=FBgn0052645.mrna2;Target=FBgn0052645 1264 1389 +
Chr2	gffcl	locus	79431239	79433086	.	-	.	ID=RLOC_00018835;geneIDs=FBgn0030456.1.path3;transcripts=FBgn0030456.1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	79431239	79433086	.	-	.	ID=FBgn0030456.1.mrna3;geneID=FBgn0030456.1.path3;Name=FBgn0030456.1;Dir=sensecoverage=100.0;identity=99.8;matches=1661;mismatches=4;indels=0;unknowns=0;locus=RLOC_00018835
Chr2	stalkie_big_nohaplotig	exon	79431239	79432000	99	-	.	Parent=FBgn0030456.1.mrna3;Target=FBgn0030456.1 904 1665 +
Chr2	stalkie_big_nohaplotig	exon	79432060	79432503	99	-	.	Parent=FBgn0030456.1.mrna3;Target=FBgn0030456.1 460 903 +
Chr2	stalkie_big_nohaplotig	exon	79432571	79432705	100	-	.	Parent=FBgn0030456.1.mrna3;Target=FBgn0030456.1 325 459 +
Chr2	stalkie_big_nohaplotig	exon	79432763	79433086	99	-	.	Parent=FBgn0030456.1.mrna3;Target=FBgn0030456.1 1 324 +
Chr2	stalkie_big_nohaplotig	CDS	79431239	79432000	.	-	0	Parent=FBgn0030456.1.mrna3;Target=FBgn0030456.1 904 1665 +
Chr2	stalkie_big_nohaplotig	CDS	79432060	79432503	.	-	0	Parent=FBgn0030456.1.mrna3;Target=FBgn0030456.1 460 903 +
Chr2	stalkie_big_nohaplotig	CDS	79432571	79432705	.	-	0	Parent=FBgn0030456.1.mrna3;Target=FBgn0030456.1 325 459 +
Chr2	stalkie_big_nohaplotig	CDS	79432763	79433086	.	-	0	Parent=FBgn0030456.1.mrna3;Target=FBgn0030456.1 1 324 +
Chr2	gffcl	locus	79583858	79584303	.	+	.	ID=RLOC_00018836;geneIDs=comp148497_c0_seq1.path1;transcripts=comp148497_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79583858	79584303	.	+	.	ID=comp148497_c0_seq1.mrna1;geneID=comp148497_c0_seq1.path1;Name=comp148497_c0_seq1;Dir=indeterminatecoverage=64.6;identity=91.5;matches=408;mismatches=33;indels=5;unknowns=0;Target=comp148497_c0_seq1 683 243 .;CDS_Target=comp148497_c0_seq1 330 244 .;locus=RLOC_00018836
Chr2	stalkie_big_nohaplotig	exon	79583858	79584303	91	+	.	Parent=comp148497_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	79583859	79583945	.	+	0	Parent=comp148497_c0_seq1.mrna1
Chr2	gffcl	locus	79632121	79680438	.	+	.	ID=RLOC_00018837;geneIDs=comp158526_c1_seq1.path1;transcripts=comp158526_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79632121	79680438	.	+	.	ID=comp158526_c1_seq1.mrna1;geneID=comp158526_c1_seq1.path1;Name=comp158526_c1_seq1;Dir=indeterminatecoverage=89.5;identity=97.7;matches=1635;mismatches=34;indels=4;unknowns=0;Target=comp158526_c1_seq1 1201 782 .;locus=RLOC_00018837
Chr2	stalkie_big_nohaplotig	exon	79632121	79632127	100	+	.	Parent=comp158526_c1_seq1.mrna1;Target=comp158526_c1_seq1 202 196 .
Chr2	stalkie_big_nohaplotig	exon	79638050	79638052	100	+	.	Parent=comp158526_c1_seq1.mrna1;Target=comp158526_c1_seq1 205 203 .
Chr2	stalkie_big_nohaplotig	exon	79649483	79649494	100	+	.	Parent=comp158526_c1_seq1.mrna1;Target=comp158526_c1_seq1 217 206 .
Chr2	stalkie_big_nohaplotig	exon	79652218	79652224	100	+	.	Parent=comp158526_c1_seq1.mrna1;Target=comp158526_c1_seq1 224 218 .
Chr2	stalkie_big_nohaplotig	exon	79658773	79658786	78	+	.	Parent=comp158526_c1_seq1.mrna1;Target=comp158526_c1_seq1 237 225 .
Chr2	stalkie_big_nohaplotig	exon	79662269	79662273	100	+	.	Parent=comp158526_c1_seq1.mrna1;Target=comp158526_c1_seq1 242 238 .
Chr2	stalkie_big_nohaplotig	exon	79668876	79668879	100	+	.	Parent=comp158526_c1_seq1.mrna1;Target=comp158526_c1_seq1 246 243 .
Chr2	stalkie_big_nohaplotig	exon	79673513	79673518	100	+	.	Parent=comp158526_c1_seq1.mrna1;Target=comp158526_c1_seq1 252 247 .
Chr2	stalkie_big_nohaplotig	exon	79678825	79680438	97	+	.	Parent=comp158526_c1_seq1.mrna1;Target=comp158526_c1_seq1 1865 253 .
Chr2	stalkie_big_nohaplotig	CDS	79679355	79679774	.	+	0	Parent=comp158526_c1_seq1.mrna1
Chr2	gffcl	locus	79681069	79681911	.	-	.	ID=RLOC_00018838;geneIDs=comp149980_c0_seq1.path1;transcripts=comp149980_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79681069	79681911	.	-	.	ID=comp149980_c0_seq1.mrna1;geneID=comp149980_c0_seq1.path1;Name=comp149980_c0_seq1;Dir=sensecoverage=99.4;identity=100.0;matches=780;mismatches=0;indels=0;unknowns=0;Target=comp149980_c0_seq1 140 316 +;locus=RLOC_00018838
Chr2	stalkie_big_nohaplotig	exon	79681069	79681441	100	-	.	Parent=comp149980_c0_seq1.mrna1;Target=comp149980_c0_seq1 413 785 +
Chr2	stalkie_big_nohaplotig	exon	79681505	79681911	100	-	.	Parent=comp149980_c0_seq1.mrna1;Target=comp149980_c0_seq1 6 412 +
Chr2	stalkie_big_nohaplotig	CDS	79681601	79681777	.	-	0	Parent=comp149980_c0_seq1.mrna1
Chr2	gffcl	locus	79725907	79727314	.	+	.	ID=RLOC_00018839;geneIDs=comp159876_c0_seq1.path1;transcripts=comp159876_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79725907	79727314	.	+	.	ID=comp159876_c0_seq1.mrna1;geneID=comp159876_c0_seq1.path1;Name=comp159876_c0_seq1;Dir=indeterminatecoverage=98.7;identity=97.1;matches=1379;mismatches=28;indels=13;unknowns=0;Target=comp159876_c0_seq1 1438 20 .;CDS_Target=comp159876_c0_seq1 213 22 .;locus=RLOC_00018839
Chr2	stalkie_big_nohaplotig	exon	79725907	79727314	97	+	.	Parent=comp159876_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	79725909	79726100	.	+	0	Parent=comp159876_c0_seq1.mrna1
Chr2	gffcl	locus	79728496	79729076	.	-	.	ID=RLOC_00018840;geneIDs=comp152311_c0_seq1.path1;transcripts=comp152311_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79728496	79729076	.	-	.	ID=comp152311_c0_seq1.mrna1;geneID=comp152311_c0_seq1.path1;Name=comp152311_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.9;matches=578;mismatches=3;indels=22;unknowns=0;Target=comp152311_c0_seq1 603 1 .;CDS_Target=comp152311_c0_seq1 179 3 .;locus=RLOC_00018840
Chr2	stalkie_big_nohaplotig	exon	79728496	79729076	95	-	.	Parent=comp152311_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	79728898	79729074	.	-	0	Parent=comp152311_c0_seq1.mrna1
Chr2	gffcl	locus	79729577	79730830	.	+	.	ID=RLOC_00018841;geneIDs=ORF956.path3;transcripts=ORF956.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	79729577	79730830	.	+	.	ID=ORF956.mrna3;geneID=ORF956.path3;Name=ORF956;Dir=indeterminatecoverage=100.0;identity=94.3;matches=1251;mismatches=3;indels=72;unknowns=0;Target=ORF956 1326 1 .;locus=RLOC_00018841
Chr2	stalkie_big_nohaplotig	exon	79729577	79730830	94	+	.	Parent=ORF956.mrna3
Chr2	stalkie_big_nohaplotig	CDS	79729577	79730830	.	+	0	Parent=ORF956.mrna3
Chr2	gffcl	locus	79740002	79740287	.	-	.	ID=RLOC_00018842;geneIDs=comp151435_c1_seq1.path1;transcripts=comp151435_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79740002	79740287	.	-	.	ID=comp151435_c1_seq1.mrna1;geneID=comp151435_c1_seq1.path1;Name=comp151435_c1_seq1;Dir=indeterminatecoverage=99.3;identity=95.8;matches=274;mismatches=12;indels=0;unknowns=0;Target=comp151435_c1_seq1 286 1 .;CDS_Target=comp151435_c1_seq1 64 2 .;locus=RLOC_00018842
Chr2	stalkie_big_nohaplotig	exon	79740002	79740287	95	-	.	Parent=comp151435_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	79740224	79740286	.	-	0	Parent=comp151435_c1_seq1.mrna1
Chr2	gffcl	locus	79776567	79777403	.	-	.	ID=RLOC_00018844;geneIDs=ORF2583.path1;transcripts=ORF2583.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79776567	79777403	.	-	.	ID=ORF2583.mrna1;geneID=ORF2583.path1;Name=ORF2583;Dir=indeterminatecoverage=100.0;identity=100.0;matches=837;mismatches=0;indels=0;unknowns=0;Target=ORF2583 837 1 .;locus=RLOC_00018844
Chr2	stalkie_big_nohaplotig	exon	79776567	79777403	100	-	.	Parent=ORF2583.mrna1
Chr2	stalkie_big_nohaplotig	CDS	79776567	79777403	.	-	0	Parent=ORF2583.mrna1
Chr2	gffcl	locus	79777847	79780683	.	-	.	ID=RLOC_00018845;geneIDs=comp162428_c4_seq1.path1;transcripts=comp162428_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79777847	79780683	.	-	.	ID=comp162428_c4_seq1.mrna1;geneID=comp162428_c4_seq1.path1;Name=comp162428_c4_seq1;Dir=antisensecoverage=100.0;identity=99.2;matches=1679;mismatches=9;indels=4;unknowns=0;Target=comp162428_c4_seq1 1007 1063 .;locus=RLOC_00018845
Chr2	stalkie_big_nohaplotig	exon	79777847	79778792	98	-	.	Parent=comp162428_c4_seq1.mrna1;Target=comp162428_c4_seq1 1 949 -
Chr2	stalkie_big_nohaplotig	exon	79779942	79780683	99	-	.	Parent=comp162428_c4_seq1.mrna1;Target=comp162428_c4_seq1 950 1692 -
Chr2	stalkie_big_nohaplotig	CDS	79779999	79780054	.	-	0	Parent=comp162428_c4_seq1.mrna1
Chr2	gffcl	locus	79794992	79804252	.	+	.	ID=RLOC_00018846;geneIDs=comp162229_c0_seq1.path2;transcripts=comp162229_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	79794992	79804252	.	+	.	ID=comp162229_c0_seq1.mrna2;geneID=comp162229_c0_seq1.path2;Name=comp162229_c0_seq1;Dir=antisensecoverage=97.5;identity=99.5;matches=2892;mismatches=13;indels=2;unknowns=0;Target=comp162229_c0_seq1 1711 1884 .;locus=RLOC_00018846
Chr2	stalkie_big_nohaplotig	exon	79794992	79795246	100	+	.	Parent=comp162229_c0_seq1.mrna2;Target=comp162229_c0_seq1 2729 2983 -
Chr2	stalkie_big_nohaplotig	exon	79795400	79795528	96	+	.	Parent=comp162229_c0_seq1.mrna2;Target=comp162229_c0_seq1 2600 2728 -
Chr2	stalkie_big_nohaplotig	exon	79795595	79796145	98	+	.	Parent=comp162229_c0_seq1.mrna2;Target=comp162229_c0_seq1 2048 2599 -
Chr2	stalkie_big_nohaplotig	exon	79796204	79796615	100	+	.	Parent=comp162229_c0_seq1.mrna2;Target=comp162229_c0_seq1 1636 2047 -
Chr2	stalkie_big_nohaplotig	exon	79796774	79797203	99	+	.	Parent=comp162229_c0_seq1.mrna2;Target=comp162229_c0_seq1 1205 1635 -
Chr2	stalkie_big_nohaplotig	exon	79797264	79797440	100	+	.	Parent=comp162229_c0_seq1.mrna2;Target=comp162229_c0_seq1 1028 1204 -
Chr2	stalkie_big_nohaplotig	exon	79803302	79804252	99	+	.	Parent=comp162229_c0_seq1.mrna2;Target=comp162229_c0_seq1 77 1027 -
Chr2	stalkie_big_nohaplotig	CDS	79796367	79796540	.	+	2	Parent=comp162229_c0_seq1.mrna2
Chr2	gffcl	locus	79877585	79878505	.	+	.	ID=RLOC_00018847;geneIDs=FBgn0029134.2.path1;transcripts=FBgn0029134.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79877585	79878505	.	+	.	ID=FBgn0029134.2.mrna1;geneID=FBgn0029134.2.path1;Name=FBgn0029134.2;Dir=sensecoverage=100.0;identity=99.4;matches=859;mismatches=5;indels=0;unknowns=0;locus=RLOC_00018847
Chr2	stalkie_big_nohaplotig	exon	79877585	79877698	96	+	.	Parent=FBgn0029134.2.mrna1;Target=FBgn0029134.2 1 114 +
Chr2	stalkie_big_nohaplotig	exon	79877756	79878505	99	+	.	Parent=FBgn0029134.2.mrna1;Target=FBgn0029134.2 115 864 +
Chr2	stalkie_big_nohaplotig	CDS	79877585	79877698	.	+	0	Parent=FBgn0029134.2.mrna1;Target=FBgn0029134.2 1 114 +
Chr2	stalkie_big_nohaplotig	CDS	79877756	79878505	.	+	0	Parent=FBgn0029134.2.mrna1;Target=FBgn0029134.2 115 864 +
Chr2	stalkie_big_nohaplotig	mRNA	79913650	79924169	.	+	.	ID=FBgn0026314.2.mrna1;geneID=FBgn0026314.2.path1;Name=FBgn0026314.2;Dir=sensecoverage=100.0;identity=99.6;matches=1586;mismatches=7;indels=0;unknowns=0;locus=RLOC_00018848
Chr2	stalkie_big_nohaplotig	exon	79913650	79913938	99	+	.	Parent=FBgn0026314.2.mrna1;Target=FBgn0026314.2 1 289 +
Chr2	stalkie_big_nohaplotig	exon	79922866	79924169	99	+	.	Parent=FBgn0026314.2.mrna1;Target=FBgn0026314.2 290 1593 +
Chr2	stalkie_big_nohaplotig	CDS	79913650	79913938	.	+	0	Parent=FBgn0026314.2.mrna1;Target=FBgn0026314.2 1 289 +
Chr2	stalkie_big_nohaplotig	CDS	79922866	79924169	.	+	2	Parent=FBgn0026314.2.mrna1;Target=FBgn0026314.2 290 1593 +
Chr2	stalkie_big_nohaplotig	mRNA	80083841	80084644	.	+	.	ID=comp154680_c0_seq1.mrna1;geneID=comp154680_c0_seq1.path1;Name=comp154680_c0_seq1;Dir=indeterminatecoverage=99.8;identity=90.7;matches=786;mismatches=17;indels=64;unknowns=0;Target=comp154680_c0_seq1 868 3 .;CDS_Target=comp154680_c0_seq1 83 3 .;locus=RLOC_00018848
Chr2	stalkie_big_nohaplotig	exon	80083841	80084644	90	+	.	Parent=comp154680_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80083841	80083887	.	+	0	Parent=comp154680_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80364708	80371113	.	+	.	ID=comp139725_c0_seq1.mrna1;geneID=comp139725_c0_seq1.path1;Name=comp139725_c0_seq1;Dir=antisensecoverage=94.3;identity=98.9;matches=374;mismatches=4;indels=0;unknowns=0;locus=RLOC_00018848
Chr2	stalkie_big_nohaplotig	exon	80364708	80364745	100	+	.	Parent=comp139725_c0_seq1.mrna1;Target=comp139725_c0_seq1 341 378 -
Chr2	stalkie_big_nohaplotig	exon	80364872	80365187	98	+	.	Parent=comp139725_c0_seq1.mrna1;Target=comp139725_c0_seq1 25 340 -
Chr2	stalkie_big_nohaplotig	exon	80371090	80371113	100	+	.	Parent=comp139725_c0_seq1.mrna1;Target=comp139725_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	CDS	80364710	80364745	.	+	0	Parent=comp139725_c0_seq1.mrna1;Target=comp139725_c0_seq1 341 376 .
Chr2	stalkie_big_nohaplotig	CDS	80364872	80364970	.	+	0	Parent=comp139725_c0_seq1.mrna1;Target=comp139725_c0_seq1 242 340 .
Chr2	stalkie_big_nohaplotig	mRNA	80371090	80373409	.	+	.	ID=FBgn0260746.1.mrna1;geneID=FBgn0260746.1.path1;Name=FBgn0260746.1;Dir=sensecoverage=97.4;identity=99.9;matches=1901;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018848
Chr2	stalkie_big_nohaplotig	exon	80371090	80371320	100	+	.	Parent=FBgn0260746.1.mrna1;Target=FBgn0260746.1 51 281 +
Chr2	stalkie_big_nohaplotig	exon	80371387	80371537	100	+	.	Parent=FBgn0260746.1.mrna1;Target=FBgn0260746.1 282 432 +
Chr2	stalkie_big_nohaplotig	exon	80371595	80371658	98	+	.	Parent=FBgn0260746.1.mrna1;Target=FBgn0260746.1 433 496 +
Chr2	stalkie_big_nohaplotig	exon	80371731	80372148	100	+	.	Parent=FBgn0260746.1.mrna1;Target=FBgn0260746.1 497 914 +
Chr2	stalkie_big_nohaplotig	exon	80372371	80373409	99	+	.	Parent=FBgn0260746.1.mrna1;Target=FBgn0260746.1 915 1953 +
Chr2	stalkie_big_nohaplotig	CDS	80371091	80371320	.	+	0	Parent=FBgn0260746.1.mrna1;Target=FBgn0260746.1 52 281 +
Chr2	stalkie_big_nohaplotig	CDS	80371387	80371537	.	+	1	Parent=FBgn0260746.1.mrna1;Target=FBgn0260746.1 282 432 +
Chr2	stalkie_big_nohaplotig	CDS	80371595	80371658	.	+	0	Parent=FBgn0260746.1.mrna1;Target=FBgn0260746.1 433 496 +
Chr2	stalkie_big_nohaplotig	CDS	80371731	80372148	.	+	2	Parent=FBgn0260746.1.mrna1;Target=FBgn0260746.1 497 914 +
Chr2	stalkie_big_nohaplotig	CDS	80372371	80373409	.	+	1	Parent=FBgn0260746.1.mrna1;Target=FBgn0260746.1 915 1953 +
Chr2	stalkie_big_nohaplotig	mRNA	80496564	80500217	.	+	.	ID=comp155568_c1_seq1.mrna1;geneID=comp155568_c1_seq1.path1;Name=comp155568_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=3648;mismatches=6;indels=0;unknowns=0;Target=comp155568_c1_seq1 3654 1 .;CDS_Target=comp155568_c1_seq1 3288 2989 .;locus=RLOC_00018848
Chr2	stalkie_big_nohaplotig	exon	80496564	80500217	99	+	.	Parent=comp155568_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80499552	80499851	.	+	0	Parent=comp155568_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80554661	80562687	.	+	.	ID=FBgn0250757.4.mrna1;geneID=FBgn0250757.4.path1;Name=FBgn0250757.4;Dir=sensecoverage=100.0;identity=99.3;matches=1412;mismatches=10;indels=0;unknowns=0;locus=RLOC_00018848
Chr2	stalkie_big_nohaplotig	exon	80554661	80554681	100	+	.	Parent=FBgn0250757.4.mrna1;Target=FBgn0250757.4 1 21 +
Chr2	stalkie_big_nohaplotig	exon	80559615	80559680	100	+	.	Parent=FBgn0250757.4.mrna1;Target=FBgn0250757.4 22 87 +
Chr2	stalkie_big_nohaplotig	exon	80559954	80560005	100	+	.	Parent=FBgn0250757.4.mrna1;Target=FBgn0250757.4 88 139 +
Chr2	stalkie_big_nohaplotig	exon	80560112	80560179	100	+	.	Parent=FBgn0250757.4.mrna1;Target=FBgn0250757.4 140 207 +
Chr2	stalkie_big_nohaplotig	exon	80560248	80560402	100	+	.	Parent=FBgn0250757.4.mrna1;Target=FBgn0250757.4 208 362 +
Chr2	stalkie_big_nohaplotig	exon	80561206	80561455	97	+	.	Parent=FBgn0250757.4.mrna1;Target=FBgn0250757.4 363 612 +
Chr2	stalkie_big_nohaplotig	exon	80561741	80562121	99	+	.	Parent=FBgn0250757.4.mrna1;Target=FBgn0250757.4 613 993 +
Chr2	stalkie_big_nohaplotig	exon	80562182	80562360	100	+	.	Parent=FBgn0250757.4.mrna1;Target=FBgn0250757.4 994 1172 +
Chr2	stalkie_big_nohaplotig	exon	80562438	80562687	99	+	.	Parent=FBgn0250757.4.mrna1;Target=FBgn0250757.4 1173 1422 +
Chr2	stalkie_big_nohaplotig	CDS	80554661	80554681	.	+	0	Parent=FBgn0250757.4.mrna1;Target=FBgn0250757.4 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	80559615	80559680	.	+	0	Parent=FBgn0250757.4.mrna1;Target=FBgn0250757.4 22 87 +
Chr2	stalkie_big_nohaplotig	CDS	80559954	80560005	.	+	0	Parent=FBgn0250757.4.mrna1;Target=FBgn0250757.4 88 139 +
Chr2	stalkie_big_nohaplotig	CDS	80560112	80560179	.	+	2	Parent=FBgn0250757.4.mrna1;Target=FBgn0250757.4 140 207 +
Chr2	stalkie_big_nohaplotig	CDS	80560248	80560402	.	+	0	Parent=FBgn0250757.4.mrna1;Target=FBgn0250757.4 208 362 +
Chr2	stalkie_big_nohaplotig	CDS	80561206	80561455	.	+	1	Parent=FBgn0250757.4.mrna1;Target=FBgn0250757.4 363 612 +
Chr2	stalkie_big_nohaplotig	CDS	80561741	80562121	.	+	0	Parent=FBgn0250757.4.mrna1;Target=FBgn0250757.4 613 993 +
Chr2	stalkie_big_nohaplotig	CDS	80562182	80562360	.	+	0	Parent=FBgn0250757.4.mrna1;Target=FBgn0250757.4 994 1172 +
Chr2	stalkie_big_nohaplotig	CDS	80562438	80562687	.	+	1	Parent=FBgn0250757.4.mrna1;Target=FBgn0250757.4 1173 1422 +
Chr2	gffcl	locus	79902208	79904741	.	.	.	ID=RLOC_00018849;geneIDs=comp160031_c0_seq1.path3,comp160259_c0_seq1.path2;transcripts=comp160031_c0_seq1.mrna3,comp160259_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	79902208	79904192	.	+	.	ID=comp160031_c0_seq1.mrna3;geneID=comp160031_c0_seq1.path3;Name=comp160031_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.7;matches=1574;mismatches=138;indels=24;unknowns=0;Target=comp160031_c0_seq1 670 494 .;locus=RLOC_00018849
Chr2	stalkie_big_nohaplotig	exon	79902208	79902609	90	+	.	Parent=comp160031_c0_seq1.mrna3;Target=comp160031_c0_seq1 394 1 .
Chr2	stalkie_big_nohaplotig	exon	79902792	79903985	91	+	.	Parent=comp160031_c0_seq1.mrna3;Target=comp160031_c0_seq1 1594 417 .
Chr2	stalkie_big_nohaplotig	exon	79904053	79904192	87	+	.	Parent=comp160031_c0_seq1.mrna3;Target=comp160031_c0_seq1 1781 1642 .
Chr2	stalkie_big_nohaplotig	CDS	79902869	79903059	.	+	0	Parent=comp160031_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	79903721	79904741	.	-	.	ID=comp160259_c0_seq1.mrna2;geneID=comp160259_c0_seq1.path2;Name=comp160259_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=991;mismatches=16;indels=14;unknowns=0;Target=comp160259_c0_seq1 1007 1 .;CDS_Target=comp160259_c0_seq1 929 837 .;locus=RLOC_00018849
Chr2	stalkie_big_nohaplotig	exon	79903721	79904741	97	-	.	Parent=comp160259_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	79903799	79903891	.	-	0	Parent=comp160259_c0_seq1.mrna2
Chr2	gffcl	locus	79917592	79917850	.	-	.	ID=RLOC_00018850;geneIDs=comp1210111_c0_seq1.path1;transcripts=comp1210111_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79917592	79917850	.	-	.	ID=comp1210111_c0_seq1.mrna1;geneID=comp1210111_c0_seq1.path1;Name=comp1210111_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=259;mismatches=0;indels=0;unknowns=0;Target=comp1210111_c0_seq1 259 1 .;CDS_Target=comp1210111_c0_seq1 128 39 .;locus=RLOC_00018850
Chr2	stalkie_big_nohaplotig	exon	79917592	79917850	100	-	.	Parent=comp1210111_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	79917723	79917812	.	-	0	Parent=comp1210111_c0_seq1.mrna1
Chr2	gffcl	locus	79930975	79932103	.	+	.	ID=RLOC_00018851;geneIDs=FBgn0026314.1.path1;transcripts=FBgn0026314.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79930975	79932103	.	+	.	ID=FBgn0026314.1.mrna1;geneID=FBgn0026314.1.path1;Name=FBgn0026314.1;Dir=sensecoverage=100.0;identity=99.3;matches=1058;mismatches=7;indels=0;unknowns=0;locus=RLOC_00018851
Chr2	stalkie_big_nohaplotig	exon	79930975	79931305	99	+	.	Parent=FBgn0026314.1.mrna1;Target=FBgn0026314.1 1 331 +
Chr2	stalkie_big_nohaplotig	exon	79931370	79932103	99	+	.	Parent=FBgn0026314.1.mrna1;Target=FBgn0026314.1 332 1065 +
Chr2	stalkie_big_nohaplotig	CDS	79930975	79931305	.	+	0	Parent=FBgn0026314.1.mrna1;Target=FBgn0026314.1 1 331 +
Chr2	stalkie_big_nohaplotig	CDS	79931370	79932103	.	+	2	Parent=FBgn0026314.1.mrna1;Target=FBgn0026314.1 332 1065 +
Chr2	gffcl	locus	79937960	79939604	.	+	.	ID=RLOC_00018852;geneIDs=FBgn0026314.3.path1;transcripts=FBgn0026314.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79937960	79939604	.	+	.	ID=FBgn0026314.3.mrna1;geneID=FBgn0026314.3.path1;Name=FBgn0026314.3;Dir=sensecoverage=100.0;identity=97.8;matches=1552;mismatches=35;indels=0;unknowns=0;locus=RLOC_00018852
Chr2	stalkie_big_nohaplotig	exon	79937960	79938227	97	+	.	Parent=FBgn0026314.3.mrna1;Target=FBgn0026314.3 1 268 +
Chr2	stalkie_big_nohaplotig	exon	79938286	79939604	97	+	.	Parent=FBgn0026314.3.mrna1;Target=FBgn0026314.3 269 1587 +
Chr2	stalkie_big_nohaplotig	CDS	79937960	79938227	.	+	0	Parent=FBgn0026314.3.mrna1;Target=FBgn0026314.3 1 268 +
Chr2	stalkie_big_nohaplotig	CDS	79938286	79939604	.	+	2	Parent=FBgn0026314.3.mrna1;Target=FBgn0026314.3 269 1587 +
Chr2	gffcl	locus	79954322	79966025	.	-	.	ID=RLOC_00018853;geneIDs=FBgn0040259.2.path1;transcripts=FBgn0040259.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79954322	79966025	.	-	.	ID=FBgn0040259.2.mrna1;geneID=FBgn0040259.2.path1;Name=FBgn0040259.2;Dir=sensecoverage=100.0;identity=99.4;matches=1229;mismatches=6;indels=1;unknowns=0;locus=RLOC_00018853
Chr2	stalkie_big_nohaplotig	exon	79954322	79955037	99	-	.	Parent=FBgn0040259.2.mrna1;Target=FBgn0040259.2 520 1236 +
Chr2	stalkie_big_nohaplotig	exon	79955100	79955359	100	-	.	Parent=FBgn0040259.2.mrna1;Target=FBgn0040259.2 260 519 +
Chr2	stalkie_big_nohaplotig	exon	79965767	79966025	99	-	.	Parent=FBgn0040259.2.mrna1;Target=FBgn0040259.2 1 259 +
Chr2	stalkie_big_nohaplotig	CDS	79954322	79955037	.	-	0	Parent=FBgn0040259.2.mrna1;Target=FBgn0040259.2 520 1236 +
Chr2	stalkie_big_nohaplotig	CDS	79955100	79955359	.	-	2	Parent=FBgn0040259.2.mrna1;Target=FBgn0040259.2 260 519 +
Chr2	stalkie_big_nohaplotig	CDS	79965767	79966025	.	-	0	Parent=FBgn0040259.2.mrna1;Target=FBgn0040259.2 1 259 +
Chr2	gffcl	locus	79971259	79972956	.	-	.	ID=RLOC_00018854;geneIDs=FBgn0040259.1.path1;transcripts=FBgn0040259.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	79971259	79972956	.	-	.	ID=FBgn0040259.1.mrna1;geneID=FBgn0040259.1.path1;Name=FBgn0040259.1;Dir=sensecoverage=99.5;identity=99.7;matches=1572;mismatches=4;indels=0;unknowns=0;locus=RLOC_00018854
Chr2	stalkie_big_nohaplotig	exon	79971259	79972311	99	-	.	Parent=FBgn0040259.1.mrna1;Target=FBgn0040259.1 532 1584 +
Chr2	stalkie_big_nohaplotig	exon	79972370	79972629	99	-	.	Parent=FBgn0040259.1.mrna1;Target=FBgn0040259.1 272 531 +
Chr2	stalkie_big_nohaplotig	exon	79972694	79972956	100	-	.	Parent=FBgn0040259.1.mrna1;Target=FBgn0040259.1 9 271 +
Chr2	stalkie_big_nohaplotig	CDS	79971259	79972311	.	-	0	Parent=FBgn0040259.1.mrna1;Target=FBgn0040259.1 532 1584 +
Chr2	stalkie_big_nohaplotig	CDS	79972370	79972629	.	-	2	Parent=FBgn0040259.1.mrna1;Target=FBgn0040259.1 272 531 +
Chr2	stalkie_big_nohaplotig	CDS	79972694	79972955	.	-	0	Parent=FBgn0040259.1.mrna1;Target=FBgn0040259.1 10 271 +
Chr2	gffcl	locus	80056609	80058114	.	+	.	ID=RLOC_00018855;geneIDs=FBgn0037297.1.path1;transcripts=FBgn0037297.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80056609	80058114	.	+	.	ID=FBgn0037297.1.mrna1;geneID=FBgn0037297.1.path1;Name=FBgn0037297.1;Dir=sensecoverage=100.0;identity=99.8;matches=1281;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018855
Chr2	stalkie_big_nohaplotig	exon	80056609	80056742	99	+	.	Parent=FBgn0037297.1.mrna1;Target=FBgn0037297.1 1 134 +
Chr2	stalkie_big_nohaplotig	exon	80056803	80057023	100	+	.	Parent=FBgn0037297.1.mrna1;Target=FBgn0037297.1 135 355 +
Chr2	stalkie_big_nohaplotig	exon	80057077	80057183	100	+	.	Parent=FBgn0037297.1.mrna1;Target=FBgn0037297.1 356 462 +
Chr2	stalkie_big_nohaplotig	exon	80057233	80057397	99	+	.	Parent=FBgn0037297.1.mrna1;Target=FBgn0037297.1 463 627 +
Chr2	stalkie_big_nohaplotig	exon	80057458	80058114	99	+	.	Parent=FBgn0037297.1.mrna1;Target=FBgn0037297.1 628 1284 +
Chr2	stalkie_big_nohaplotig	CDS	80056609	80056742	.	+	0	Parent=FBgn0037297.1.mrna1;Target=FBgn0037297.1 1 134 +
Chr2	stalkie_big_nohaplotig	CDS	80056803	80057023	.	+	1	Parent=FBgn0037297.1.mrna1;Target=FBgn0037297.1 135 355 +
Chr2	stalkie_big_nohaplotig	CDS	80057077	80057183	.	+	2	Parent=FBgn0037297.1.mrna1;Target=FBgn0037297.1 356 462 +
Chr2	stalkie_big_nohaplotig	CDS	80057233	80057397	.	+	0	Parent=FBgn0037297.1.mrna1;Target=FBgn0037297.1 463 627 +
Chr2	stalkie_big_nohaplotig	CDS	80057458	80058114	.	+	0	Parent=FBgn0037297.1.mrna1;Target=FBgn0037297.1 628 1284 +
Chr2	gffcl	locus	80058336	80059189	.	-	.	ID=RLOC_00018856;geneIDs=FBgn0051249.1.path1;transcripts=FBgn0051249.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80058336	80059189	.	-	.	ID=FBgn0051249.1.mrna1;geneID=FBgn0051249.1.path1;Name=FBgn0051249.1;Dir=sensecoverage=100.0;identity=100.0;matches=744;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018856
Chr2	stalkie_big_nohaplotig	exon	80058336	80058688	100	-	.	Parent=FBgn0051249.1.mrna1;Target=FBgn0051249.1 392 744 +
Chr2	stalkie_big_nohaplotig	exon	80058745	80059071	100	-	.	Parent=FBgn0051249.1.mrna1;Target=FBgn0051249.1 65 391 +
Chr2	stalkie_big_nohaplotig	exon	80059126	80059189	100	-	.	Parent=FBgn0051249.1.mrna1;Target=FBgn0051249.1 1 64 +
Chr2	stalkie_big_nohaplotig	CDS	80058336	80058688	.	-	2	Parent=FBgn0051249.1.mrna1;Target=FBgn0051249.1 392 744 +
Chr2	stalkie_big_nohaplotig	CDS	80058745	80059071	.	-	2	Parent=FBgn0051249.1.mrna1;Target=FBgn0051249.1 65 391 +
Chr2	stalkie_big_nohaplotig	CDS	80059126	80059189	.	-	0	Parent=FBgn0051249.1.mrna1;Target=FBgn0051249.1 1 64 +
Chr2	gffcl	locus	80059338	80060236	.	+	.	ID=RLOC_00018857;geneIDs=FBgn0038275.1.path1;transcripts=FBgn0038275.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80059338	80060236	.	+	.	ID=FBgn0038275.1.mrna1;geneID=FBgn0038275.1.path1;Name=FBgn0038275.1;Dir=sensecoverage=100.0;identity=99.4;matches=832;mismatches=5;indels=0;unknowns=0;locus=RLOC_00018857
Chr2	stalkie_big_nohaplotig	exon	80059338	80059443	100	+	.	Parent=FBgn0038275.1.mrna1;Target=FBgn0038275.1 1 106 +
Chr2	stalkie_big_nohaplotig	exon	80059506	80060236	99	+	.	Parent=FBgn0038275.1.mrna1;Target=FBgn0038275.1 107 837 +
Chr2	stalkie_big_nohaplotig	CDS	80059338	80059443	.	+	0	Parent=FBgn0038275.1.mrna1;Target=FBgn0038275.1 1 106 +
Chr2	stalkie_big_nohaplotig	CDS	80059506	80060236	.	+	2	Parent=FBgn0038275.1.mrna1;Target=FBgn0038275.1 107 837 +
Chr2	gffcl	locus	80064287	80065049	.	-	.	ID=RLOC_00018858;geneIDs=FBgn0028662.1.path1;transcripts=FBgn0028662.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80064287	80065049	.	-	.	ID=FBgn0028662.1.mrna1;geneID=FBgn0028662.1.path1;Name=FBgn0028662.1;Dir=sensecoverage=100.0;identity=99.9;matches=674;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018858
Chr2	stalkie_big_nohaplotig	exon	80064287	80064946	99	-	.	Parent=FBgn0028662.1.mrna1;Target=FBgn0028662.1 16 675 +
Chr2	stalkie_big_nohaplotig	exon	80065035	80065049	100	-	.	Parent=FBgn0028662.1.mrna1;Target=FBgn0028662.1 1 15 +
Chr2	stalkie_big_nohaplotig	CDS	80064287	80064946	.	-	0	Parent=FBgn0028662.1.mrna1;Target=FBgn0028662.1 16 675 +
Chr2	stalkie_big_nohaplotig	CDS	80065035	80065049	.	-	0	Parent=FBgn0028662.1.mrna1;Target=FBgn0028662.1 1 15 +
Chr2	gffcl	locus	80067468	80068392	.	-	.	ID=RLOC_00018860;geneIDs=FBgn0086472.1.path1;transcripts=FBgn0086472.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80067468	80068392	.	-	.	ID=FBgn0086472.1.mrna1;geneID=FBgn0086472.1.path1;Name=FBgn0086472.1;Dir=sensecoverage=100.0;identity=99.6;matches=493;mismatches=1;indels=1;unknowns=0;locus=RLOC_00018860
Chr2	stalkie_big_nohaplotig	exon	80067468	80067538	100	-	.	Parent=FBgn0086472.1.mrna1;Target=FBgn0086472.1 425 495 +
Chr2	stalkie_big_nohaplotig	exon	80067604	80067880	99	-	.	Parent=FBgn0086472.1.mrna1;Target=FBgn0086472.1 147 424 +
Chr2	stalkie_big_nohaplotig	exon	80068247	80068392	99	-	.	Parent=FBgn0086472.1.mrna1;Target=FBgn0086472.1 1 146 +
Chr2	stalkie_big_nohaplotig	CDS	80067813	80067880	.	-	0	Parent=FBgn0086472.1.mrna1;Target=FBgn0086472.1 147 215 +
Chr2	stalkie_big_nohaplotig	CDS	80068247	80068249	.	-	0	Parent=FBgn0086472.1.mrna1;Target=FBgn0086472.1 144 146 +
Chr2	gffcl	locus	80074897	80075686	.	-	.	ID=RLOC_00018861;geneIDs=Dv_FBgn0200550.1.path1;transcripts=Dv_FBgn0200550.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80074897	80075686	.	-	.	ID=Dv_FBgn0200550.1.mrna1;geneID=Dv_FBgn0200550.1.path1;Name=Dv_FBgn0200550.1;Dir=sensecoverage=100.0;identity=100.0;matches=723;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018861
Chr2	stalkie_big_nohaplotig	exon	80074897	80075235	100	-	.	Parent=Dv_FBgn0200550.1.mrna1;Target=Dv_FBgn0200550.1 385 723 +
Chr2	stalkie_big_nohaplotig	exon	80075303	80075686	100	-	.	Parent=Dv_FBgn0200550.1.mrna1;Target=Dv_FBgn0200550.1 1 384 +
Chr2	stalkie_big_nohaplotig	CDS	80074897	80075235	.	-	0	Parent=Dv_FBgn0200550.1.mrna1;Target=Dv_FBgn0200550.1 385 723 +
Chr2	stalkie_big_nohaplotig	CDS	80075303	80075686	.	-	0	Parent=Dv_FBgn0200550.1.mrna1;Target=Dv_FBgn0200550.1 1 384 +
Chr2	gffcl	locus	80079417	80079956	.	-	.	ID=RLOC_00018862;geneIDs=FBgn0037874.1.path1;transcripts=FBgn0037874.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80079417	80079956	.	-	.	ID=FBgn0037874.1.mrna1;geneID=FBgn0037874.1.path1;Name=FBgn0037874.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=540;mismatches=0;indels=0;unknowns=0;Target=FBgn0037874.1 540 1 .;locus=RLOC_00018862
Chr2	stalkie_big_nohaplotig	exon	80079417	80079956	100	-	.	Parent=FBgn0037874.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80079417	80079956	.	-	0	Parent=FBgn0037874.1.mrna1
Chr2	gffcl	locus	80082432	80083044	.	+	.	ID=RLOC_00018863;geneIDs=FBgn0037873.1.path1;transcripts=FBgn0037873.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80082432	80083044	.	+	.	ID=FBgn0037873.1.mrna1;geneID=FBgn0037873.1.path1;Name=FBgn0037873.1;Dir=sensecoverage=100.0;identity=99.8;matches=560;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018863
Chr2	stalkie_big_nohaplotig	exon	80082432	80082478	97	+	.	Parent=FBgn0037873.1.mrna1;Target=FBgn0037873.1 1 47 +
Chr2	stalkie_big_nohaplotig	exon	80082531	80083044	100	+	.	Parent=FBgn0037873.1.mrna1;Target=FBgn0037873.1 48 561 +
Chr2	stalkie_big_nohaplotig	CDS	80082432	80082478	.	+	0	Parent=FBgn0037873.1.mrna1;Target=FBgn0037873.1 1 47 +
Chr2	stalkie_big_nohaplotig	CDS	80082531	80083044	.	+	1	Parent=FBgn0037873.1.mrna1;Target=FBgn0037873.1 48 561 +
Chr2	gffcl	locus	80107405	80108964	.	-	.	ID=RLOC_00018864;geneIDs=comp82062_c0_seq1.path1;transcripts=comp82062_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80107405	80108964	.	-	.	ID=comp82062_c0_seq1.mrna1;geneID=comp82062_c0_seq1.path1;Name=comp82062_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=1560;mismatches=0;indels=0;unknowns=0;Target=comp82062_c0_seq1 1560 1 .;CDS_Target=comp82062_c0_seq1 347 111 .;locus=RLOC_00018864
Chr2	stalkie_big_nohaplotig	exon	80107405	80108964	100	-	.	Parent=comp82062_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80108618	80108854	.	-	0	Parent=comp82062_c0_seq1.mrna1
Chr2	gffcl	locus	80161437	80162572	.	-	.	ID=RLOC_00018865;geneIDs=FBgn0037328.1.path1;transcripts=FBgn0037328.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80161437	80162572	.	-	.	ID=FBgn0037328.1.mrna1;geneID=FBgn0037328.1.path1;Name=FBgn0037328.1;Dir=sensecoverage=100.0;identity=99.6;matches=523;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018865
Chr2	stalkie_big_nohaplotig	exon	80161437	80161457	100	-	.	Parent=FBgn0037328.1.mrna1;Target=FBgn0037328.1 505 525 +
Chr2	stalkie_big_nohaplotig	exon	80161668	80161895	100	-	.	Parent=FBgn0037328.1.mrna1;Target=FBgn0037328.1 277 504 +
Chr2	stalkie_big_nohaplotig	exon	80161956	80162186	99	-	.	Parent=FBgn0037328.1.mrna1;Target=FBgn0037328.1 46 276 +
Chr2	stalkie_big_nohaplotig	exon	80162528	80162572	100	-	.	Parent=FBgn0037328.1.mrna1;Target=FBgn0037328.1 1 45 +
Chr2	stalkie_big_nohaplotig	CDS	80161437	80161457	.	-	0	Parent=FBgn0037328.1.mrna1;Target=FBgn0037328.1 505 525 +
Chr2	stalkie_big_nohaplotig	CDS	80161668	80161895	.	-	0	Parent=FBgn0037328.1.mrna1;Target=FBgn0037328.1 277 504 +
Chr2	stalkie_big_nohaplotig	CDS	80161956	80162186	.	-	0	Parent=FBgn0037328.1.mrna1;Target=FBgn0037328.1 46 276 +
Chr2	stalkie_big_nohaplotig	CDS	80162528	80162572	.	-	0	Parent=FBgn0037328.1.mrna1;Target=FBgn0037328.1 1 45 +
Chr2	gffcl	locus	80248803	80250035	.	+	.	ID=RLOC_00018866;geneIDs=comp153183_c1_seq1.path3;transcripts=comp153183_c1_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	80248803	80250035	.	+	.	ID=comp153183_c1_seq1.mrna3;geneID=comp153183_c1_seq1.path3;Name=comp153183_c1_seq1;Dir=indeterminatecoverage=86.3;identity=99.2;matches=1223;mismatches=10;indels=0;unknowns=0;Target=comp153183_c1_seq1 1233 1 .;CDS_Target=comp153183_c1_seq1 1145 3 .;locus=RLOC_00018866
Chr2	stalkie_big_nohaplotig	exon	80248803	80250035	99	+	.	Parent=comp153183_c1_seq1.mrna3
Chr2	stalkie_big_nohaplotig	CDS	80248805	80249947	.	+	0	Parent=comp153183_c1_seq1.mrna3
Chr2	gffcl	locus	80289154	80290087	.	-	.	ID=RLOC_00018867;geneIDs=comp151346_c0_seq1.path1;transcripts=comp151346_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80289154	80290087	.	-	.	ID=comp151346_c0_seq1.mrna1;geneID=comp151346_c0_seq1.path1;Name=comp151346_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=933;mismatches=1;indels=12;unknowns=0;Target=comp151346_c0_seq1 946 1 .;CDS_Target=comp151346_c0_seq1 237 133 .;locus=RLOC_00018867
Chr2	stalkie_big_nohaplotig	exon	80289154	80290087	98	-	.	Parent=comp151346_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80289851	80289955	.	-	0	Parent=comp151346_c0_seq1.mrna1
Chr2	gffcl	locus	80290168	80327572	.	-	.	ID=RLOC_00018868;geneIDs=comp153956_c0_seq1.path2;transcripts=comp153956_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	80290168	80327572	.	-	.	ID=comp153956_c0_seq1.mrna2;geneID=comp153956_c0_seq1.path2;Name=comp153956_c0_seq1;Dir=indeterminatecoverage=89.4;identity=97.4;matches=634;mismatches=10;indels=7;unknowns=0;Target=comp153956_c0_seq1 455 375 .;locus=RLOC_00018868
Chr2	stalkie_big_nohaplotig	exon	80290168	80290800	97	-	.	Parent=comp153956_c0_seq1.mrna2;Target=comp153956_c0_seq1 728 89 .
Chr2	stalkie_big_nohaplotig	exon	80313119	80313122	100	-	.	Parent=comp153956_c0_seq1.mrna2;Target=comp153956_c0_seq1 88 85 .
Chr2	stalkie_big_nohaplotig	exon	80320581	80320584	100	-	.	Parent=comp153956_c0_seq1.mrna2;Target=comp153956_c0_seq1 84 81 .
Chr2	stalkie_big_nohaplotig	exon	80327570	80327572	100	-	.	Parent=comp153956_c0_seq1.mrna2;Target=comp153956_c0_seq1 80 78 .
Chr2	stalkie_big_nohaplotig	CDS	80290436	80290516	.	-	0	Parent=comp153956_c0_seq1.mrna2
Chr2	gffcl	locus	80290922	80291606	.	+	.	ID=RLOC_00018869;geneIDs=comp143807_c0_seq1.path2;transcripts=comp143807_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	80290922	80291606	.	+	.	ID=comp143807_c0_seq1.mrna2;geneID=comp143807_c0_seq1.path2;Name=comp143807_c0_seq1;Dir=indeterminatecoverage=97.0;identity=99.4;matches=681;mismatches=3;indels=1;unknowns=0;Target=comp143807_c0_seq1 705 22 .;CDS_Target=comp143807_c0_seq1 406 365 .;locus=RLOC_00018869
Chr2	stalkie_big_nohaplotig	exon	80290922	80291606	99	+	.	Parent=comp143807_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	80291265	80291306	.	+	0	Parent=comp143807_c0_seq1.mrna2
Chr2	gffcl	locus	80291881	80297041	.	-	.	ID=RLOC_00018870;geneIDs=FBgn0037443.1.path1;transcripts=FBgn0037443.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80291881	80297041	.	-	.	ID=FBgn0037443.1.mrna1;geneID=FBgn0037443.1.path1;Name=FBgn0037443.1;Dir=sensecoverage=100.0;identity=99.9;matches=1724;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018870
Chr2	stalkie_big_nohaplotig	exon	80291881	80292004	100	-	.	Parent=FBgn0037443.1.mrna1;Target=FBgn0037443.1 1602 1725 +
Chr2	stalkie_big_nohaplotig	exon	80292088	80292263	99	-	.	Parent=FBgn0037443.1.mrna1;Target=FBgn0037443.1 1426 1601 +
Chr2	stalkie_big_nohaplotig	exon	80292329	80292442	100	-	.	Parent=FBgn0037443.1.mrna1;Target=FBgn0037443.1 1312 1425 +
Chr2	stalkie_big_nohaplotig	exon	80293500	80293604	100	-	.	Parent=FBgn0037443.1.mrna1;Target=FBgn0037443.1 1207 1311 +
Chr2	stalkie_big_nohaplotig	exon	80293994	80294114	100	-	.	Parent=FBgn0037443.1.mrna1;Target=FBgn0037443.1 1086 1206 +
Chr2	stalkie_big_nohaplotig	exon	80294186	80294363	100	-	.	Parent=FBgn0037443.1.mrna1;Target=FBgn0037443.1 908 1085 +
Chr2	stalkie_big_nohaplotig	exon	80294436	80294563	100	-	.	Parent=FBgn0037443.1.mrna1;Target=FBgn0037443.1 780 907 +
Chr2	stalkie_big_nohaplotig	exon	80294639	80294808	100	-	.	Parent=FBgn0037443.1.mrna1;Target=FBgn0037443.1 610 779 +
Chr2	stalkie_big_nohaplotig	exon	80294886	80294950	100	-	.	Parent=FBgn0037443.1.mrna1;Target=FBgn0037443.1 545 609 +
Chr2	stalkie_big_nohaplotig	exon	80296424	80296618	100	-	.	Parent=FBgn0037443.1.mrna1;Target=FBgn0037443.1 350 544 +
Chr2	stalkie_big_nohaplotig	exon	80296693	80297041	100	-	.	Parent=FBgn0037443.1.mrna1;Target=FBgn0037443.1 1 349 +
Chr2	stalkie_big_nohaplotig	CDS	80291881	80292004	.	-	1	Parent=FBgn0037443.1.mrna1;Target=FBgn0037443.1 1602 1725 +
Chr2	stalkie_big_nohaplotig	CDS	80292088	80292263	.	-	0	Parent=FBgn0037443.1.mrna1;Target=FBgn0037443.1 1426 1601 +
Chr2	stalkie_big_nohaplotig	CDS	80292329	80292442	.	-	0	Parent=FBgn0037443.1.mrna1;Target=FBgn0037443.1 1312 1425 +
Chr2	stalkie_big_nohaplotig	CDS	80293500	80293604	.	-	0	Parent=FBgn0037443.1.mrna1;Target=FBgn0037443.1 1207 1311 +
Chr2	stalkie_big_nohaplotig	CDS	80293994	80294114	.	-	1	Parent=FBgn0037443.1.mrna1;Target=FBgn0037443.1 1086 1206 +
Chr2	stalkie_big_nohaplotig	CDS	80294186	80294363	.	-	2	Parent=FBgn0037443.1.mrna1;Target=FBgn0037443.1 908 1085 +
Chr2	stalkie_big_nohaplotig	CDS	80294436	80294563	.	-	1	Parent=FBgn0037443.1.mrna1;Target=FBgn0037443.1 780 907 +
Chr2	stalkie_big_nohaplotig	CDS	80294639	80294808	.	-	0	Parent=FBgn0037443.1.mrna1;Target=FBgn0037443.1 610 779 +
Chr2	stalkie_big_nohaplotig	CDS	80294886	80294950	.	-	2	Parent=FBgn0037443.1.mrna1;Target=FBgn0037443.1 545 609 +
Chr2	stalkie_big_nohaplotig	CDS	80296424	80296618	.	-	2	Parent=FBgn0037443.1.mrna1;Target=FBgn0037443.1 350 544 +
Chr2	stalkie_big_nohaplotig	CDS	80296693	80297041	.	-	0	Parent=FBgn0037443.1.mrna1;Target=FBgn0037443.1 1 349 +
Chr2	gffcl	locus	80329775	80330259	.	+	.	ID=RLOC_00018871;geneIDs=comp135437_c0_seq1.path1;transcripts=comp135437_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80329775	80330259	.	+	.	ID=comp135437_c0_seq1.mrna1;geneID=comp135437_c0_seq1.path1;Name=comp135437_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=484;mismatches=1;indels=1;unknowns=0;Target=comp135437_c0_seq1 486 1 .;CDS_Target=comp135437_c0_seq1 159 73 .;locus=RLOC_00018871
Chr2	stalkie_big_nohaplotig	exon	80329775	80330259	99	+	.	Parent=comp135437_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80329847	80329933	.	+	0	Parent=comp135437_c0_seq1.mrna1
Chr2	gffcl	locus	80388215	80391455	.	+	.	ID=RLOC_00018872;geneIDs=FBgn0014001.1.path2;transcripts=FBgn0014001.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	80388215	80391455	.	+	.	ID=FBgn0014001.1.mrna2;geneID=FBgn0014001.1.path2;Name=FBgn0014001.1;Dir=sensecoverage=83.0;identity=99.8;matches=1758;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018872
Chr2	stalkie_big_nohaplotig	exon	80388215	80388380	100	+	.	Parent=FBgn0014001.1.mrna2;Target=FBgn0014001.1 361 526 +
Chr2	stalkie_big_nohaplotig	exon	80388444	80388977	99	+	.	Parent=FBgn0014001.1.mrna2;Target=FBgn0014001.1 527 1060 +
Chr2	stalkie_big_nohaplotig	exon	80389582	80390342	99	+	.	Parent=FBgn0014001.1.mrna2;Target=FBgn0014001.1 1061 1821 +
Chr2	stalkie_big_nohaplotig	exon	80391092	80391310	100	+	.	Parent=FBgn0014001.1.mrna2;Target=FBgn0014001.1 1822 2040 +
Chr2	stalkie_big_nohaplotig	exon	80391375	80391455	100	+	.	Parent=FBgn0014001.1.mrna2;Target=FBgn0014001.1 2041 2121 +
Chr2	stalkie_big_nohaplotig	CDS	80388215	80388380	.	+	0	Parent=FBgn0014001.1.mrna2;Target=FBgn0014001.1 361 526 +
Chr2	stalkie_big_nohaplotig	CDS	80388444	80388977	.	+	2	Parent=FBgn0014001.1.mrna2;Target=FBgn0014001.1 527 1060 +
Chr2	stalkie_big_nohaplotig	CDS	80389582	80390342	.	+	2	Parent=FBgn0014001.1.mrna2;Target=FBgn0014001.1 1061 1821 +
Chr2	stalkie_big_nohaplotig	CDS	80391092	80391310	.	+	0	Parent=FBgn0014001.1.mrna2;Target=FBgn0014001.1 1822 2040 +
Chr2	stalkie_big_nohaplotig	CDS	80391375	80391455	.	+	0	Parent=FBgn0014001.1.mrna2;Target=FBgn0014001.1 2041 2121 +
Chr2	gffcl	locus	80396387	80396947	.	-	.	ID=RLOC_00018873;geneIDs=FBgn0032053.1.path1;transcripts=FBgn0032053.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80396387	80396947	.	-	.	ID=FBgn0032053.1.mrna1;geneID=FBgn0032053.1.path1;Name=FBgn0032053.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=558;mismatches=3;indels=0;unknowns=0;Target=FBgn0032053.1 561 1 .;locus=RLOC_00018873
Chr2	stalkie_big_nohaplotig	exon	80396387	80396947	99	-	.	Parent=FBgn0032053.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80396387	80396947	.	-	0	Parent=FBgn0032053.1.mrna1
Chr2	gffcl	locus	80409672	80411408	.	+	.	ID=RLOC_00018875;geneIDs=FBgn0037470.1.path1;transcripts=FBgn0037470.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80409672	80411408	.	+	.	ID=FBgn0037470.1.mrna1;geneID=FBgn0037470.1.path1;Name=FBgn0037470.1;Dir=sensecoverage=100.0;identity=100.0;matches=1401;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018875
Chr2	stalkie_big_nohaplotig	exon	80409672	80409695	100	+	.	Parent=FBgn0037470.1.mrna1;Target=FBgn0037470.1 1 24 +
Chr2	stalkie_big_nohaplotig	exon	80409755	80410121	100	+	.	Parent=FBgn0037470.1.mrna1;Target=FBgn0037470.1 25 391 +
Chr2	stalkie_big_nohaplotig	exon	80410173	80410397	100	+	.	Parent=FBgn0037470.1.mrna1;Target=FBgn0037470.1 392 616 +
Chr2	stalkie_big_nohaplotig	exon	80410451	80410699	100	+	.	Parent=FBgn0037470.1.mrna1;Target=FBgn0037470.1 617 865 +
Chr2	stalkie_big_nohaplotig	exon	80410761	80410925	100	+	.	Parent=FBgn0037470.1.mrna1;Target=FBgn0037470.1 866 1030 +
Chr2	stalkie_big_nohaplotig	exon	80410981	80411179	100	+	.	Parent=FBgn0037470.1.mrna1;Target=FBgn0037470.1 1031 1229 +
Chr2	stalkie_big_nohaplotig	exon	80411237	80411408	100	+	.	Parent=FBgn0037470.1.mrna1;Target=FBgn0037470.1 1230 1401 +
Chr2	stalkie_big_nohaplotig	CDS	80409672	80409695	.	+	0	Parent=FBgn0037470.1.mrna1;Target=FBgn0037470.1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	80409755	80410121	.	+	0	Parent=FBgn0037470.1.mrna1;Target=FBgn0037470.1 25 391 +
Chr2	stalkie_big_nohaplotig	CDS	80410173	80410397	.	+	2	Parent=FBgn0037470.1.mrna1;Target=FBgn0037470.1 392 616 +
Chr2	stalkie_big_nohaplotig	CDS	80410451	80410699	.	+	2	Parent=FBgn0037470.1.mrna1;Target=FBgn0037470.1 617 865 +
Chr2	stalkie_big_nohaplotig	CDS	80410761	80410925	.	+	2	Parent=FBgn0037470.1.mrna1;Target=FBgn0037470.1 866 1030 +
Chr2	stalkie_big_nohaplotig	CDS	80410981	80411179	.	+	2	Parent=FBgn0037470.1.mrna1;Target=FBgn0037470.1 1031 1229 +
Chr2	stalkie_big_nohaplotig	CDS	80411237	80411408	.	+	1	Parent=FBgn0037470.1.mrna1;Target=FBgn0037470.1 1230 1401 +
Chr2	gffcl	locus	80419376	80422695	.	-	.	ID=RLOC_00018876;geneIDs=FBgn0037976.1.path1;transcripts=FBgn0037976.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80419376	80422695	.	-	.	ID=FBgn0037976.1.mrna1;geneID=FBgn0037976.1.path1;Name=FBgn0037976.1;Dir=sensecoverage=100.0;identity=99.4;matches=1029;mismatches=6;indels=0;unknowns=0;locus=RLOC_00018876
Chr2	stalkie_big_nohaplotig	exon	80419376	80419398	100	-	.	Parent=FBgn0037976.1.mrna1;Target=FBgn0037976.1 1013 1035 +
Chr2	stalkie_big_nohaplotig	exon	80421221	80421461	99	-	.	Parent=FBgn0037976.1.mrna1;Target=FBgn0037976.1 772 1012 +
Chr2	stalkie_big_nohaplotig	exon	80421605	80422136	99	-	.	Parent=FBgn0037976.1.mrna1;Target=FBgn0037976.1 240 771 +
Chr2	stalkie_big_nohaplotig	exon	80422288	80422427	100	-	.	Parent=FBgn0037976.1.mrna1;Target=FBgn0037976.1 100 239 +
Chr2	stalkie_big_nohaplotig	exon	80422597	80422695	100	-	.	Parent=FBgn0037976.1.mrna1;Target=FBgn0037976.1 1 99 +
Chr2	stalkie_big_nohaplotig	CDS	80419376	80419398	.	-	2	Parent=FBgn0037976.1.mrna1;Target=FBgn0037976.1 1013 1035 +
Chr2	stalkie_big_nohaplotig	CDS	80421221	80421461	.	-	0	Parent=FBgn0037976.1.mrna1;Target=FBgn0037976.1 772 1012 +
Chr2	stalkie_big_nohaplotig	CDS	80421605	80422136	.	-	1	Parent=FBgn0037976.1.mrna1;Target=FBgn0037976.1 240 771 +
Chr2	stalkie_big_nohaplotig	CDS	80422288	80422427	.	-	0	Parent=FBgn0037976.1.mrna1;Target=FBgn0037976.1 100 239 +
Chr2	stalkie_big_nohaplotig	CDS	80422597	80422695	.	-	0	Parent=FBgn0037976.1.mrna1;Target=FBgn0037976.1 1 99 +
Chr2	gffcl	locus	80443306	80449163	.	-	.	ID=RLOC_00018877;geneIDs=FBgn0037978.1.path1,comp153558_c1_seq1.path1;transcripts=FBgn0037978.1.mrna1,comp153558_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80443306	80449163	.	-	.	ID=FBgn0037978.1.mrna1;geneID=FBgn0037978.1.path1;Name=FBgn0037978.1;Dir=sensecoverage=100.0;identity=99.8;matches=1788;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018877
Chr2	stalkie_big_nohaplotig	exon	80443306	80443445	100	-	.	Parent=FBgn0037978.1.mrna1;Target=FBgn0037978.1 1652 1791 +
Chr2	stalkie_big_nohaplotig	exon	80443498	80443852	100	-	.	Parent=FBgn0037978.1.mrna1;Target=FBgn0037978.1 1297 1651 +
Chr2	stalkie_big_nohaplotig	exon	80446101	80446215	100	-	.	Parent=FBgn0037978.1.mrna1;Target=FBgn0037978.1 1182 1296 +
Chr2	stalkie_big_nohaplotig	exon	80447618	80447761	99	-	.	Parent=FBgn0037978.1.mrna1;Target=FBgn0037978.1 1038 1181 +
Chr2	stalkie_big_nohaplotig	exon	80447823	80447969	100	-	.	Parent=FBgn0037978.1.mrna1;Target=FBgn0037978.1 891 1037 +
Chr2	stalkie_big_nohaplotig	exon	80448026	80448726	99	-	.	Parent=FBgn0037978.1.mrna1;Target=FBgn0037978.1 190 890 +
Chr2	stalkie_big_nohaplotig	exon	80448975	80449163	99	-	.	Parent=FBgn0037978.1.mrna1;Target=FBgn0037978.1 1 189 +
Chr2	stalkie_big_nohaplotig	CDS	80443306	80443445	.	-	2	Parent=FBgn0037978.1.mrna1;Target=FBgn0037978.1 1652 1791 +
Chr2	stalkie_big_nohaplotig	CDS	80443498	80443852	.	-	0	Parent=FBgn0037978.1.mrna1;Target=FBgn0037978.1 1297 1651 +
Chr2	stalkie_big_nohaplotig	CDS	80446101	80446215	.	-	1	Parent=FBgn0037978.1.mrna1;Target=FBgn0037978.1 1182 1296 +
Chr2	stalkie_big_nohaplotig	CDS	80447618	80447761	.	-	1	Parent=FBgn0037978.1.mrna1;Target=FBgn0037978.1 1038 1181 +
Chr2	stalkie_big_nohaplotig	CDS	80447823	80447969	.	-	1	Parent=FBgn0037978.1.mrna1;Target=FBgn0037978.1 891 1037 +
Chr2	stalkie_big_nohaplotig	CDS	80448026	80448726	.	-	0	Parent=FBgn0037978.1.mrna1;Target=FBgn0037978.1 190 890 +
Chr2	stalkie_big_nohaplotig	CDS	80448975	80449163	.	-	0	Parent=FBgn0037978.1.mrna1;Target=FBgn0037978.1 1 189 +
Chr2	stalkie_big_nohaplotig	mRNA	80444789	80446121	.	-	.	ID=comp153558_c1_seq1.mrna1;geneID=comp153558_c1_seq1.path1;Name=comp153558_c1_seq1;Dir=indeterminatecoverage=99.9;identity=96.4;matches=1322;mismatches=11;indels=39;unknowns=0;Target=comp153558_c1_seq1 1372 1 .;CDS_Target=comp153558_c1_seq1 1091 960 .;locus=RLOC_00018877
Chr2	stalkie_big_nohaplotig	exon	80444789	80446121	96	-	.	Parent=comp153558_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80445031	80445162	.	-	0	Parent=comp153558_c1_seq1.mrna1
Chr2	gffcl	locus	80449335	80450320	.	+	.	ID=RLOC_00018878;geneIDs=FBgn0037981.1.path1;transcripts=FBgn0037981.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80449335	80450320	.	+	.	ID=FBgn0037981.1.mrna1;geneID=FBgn0037981.1.path1;Name=FBgn0037981.1;Dir=indeterminatecoverage=99.9;identity=99.2;matches=978;mismatches=2;indels=6;unknowns=0;Target=FBgn0037981.1 981 2 .;CDS_Target=FBgn0037981.1 981 4 .;locus=RLOC_00018878
Chr2	stalkie_big_nohaplotig	exon	80449335	80450320	99	+	.	Parent=FBgn0037981.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80449337	80450320	.	+	0	Parent=FBgn0037981.1.mrna1
Chr2	gffcl	locus	80450548	80452011	.	-	.	ID=RLOC_00018879;geneIDs=FBgn0037446.1.path1;transcripts=FBgn0037446.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80450548	80452011	.	-	.	ID=FBgn0037446.1.mrna1;geneID=FBgn0037446.1.path1;Name=FBgn0037446.1;Dir=sensecoverage=100.0;identity=99.8;matches=1276;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018879
Chr2	stalkie_big_nohaplotig	exon	80450548	80450758	100	-	.	Parent=FBgn0037446.1.mrna1;Target=FBgn0037446.1 1068 1278 +
Chr2	stalkie_big_nohaplotig	exon	80450837	80450971	100	-	.	Parent=FBgn0037446.1.mrna1;Target=FBgn0037446.1 933 1067 +
Chr2	stalkie_big_nohaplotig	exon	80451029	80451798	99	-	.	Parent=FBgn0037446.1.mrna1;Target=FBgn0037446.1 163 932 +
Chr2	stalkie_big_nohaplotig	exon	80451850	80452011	100	-	.	Parent=FBgn0037446.1.mrna1;Target=FBgn0037446.1 1 162 +
Chr2	stalkie_big_nohaplotig	CDS	80450548	80450758	.	-	1	Parent=FBgn0037446.1.mrna1;Target=FBgn0037446.1 1068 1278 +
Chr2	stalkie_big_nohaplotig	CDS	80450837	80450971	.	-	1	Parent=FBgn0037446.1.mrna1;Target=FBgn0037446.1 933 1067 +
Chr2	stalkie_big_nohaplotig	CDS	80451029	80451798	.	-	0	Parent=FBgn0037446.1.mrna1;Target=FBgn0037446.1 163 932 +
Chr2	stalkie_big_nohaplotig	CDS	80451850	80452011	.	-	0	Parent=FBgn0037446.1.mrna1;Target=FBgn0037446.1 1 162 +
Chr2	gffcl	locus	80453766	80455778	.	+	.	ID=RLOC_00018880;geneIDs=FBgn0037980.1.path1;transcripts=FBgn0037980.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80453766	80455778	.	+	.	ID=FBgn0037980.1.mrna1;geneID=FBgn0037980.1.path1;Name=FBgn0037980.1;Dir=sensecoverage=100.0;identity=99.9;matches=1415;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018880
Chr2	stalkie_big_nohaplotig	exon	80453766	80454071	100	+	.	Parent=FBgn0037980.1.mrna1;Target=FBgn0037980.1 1 306 +
Chr2	stalkie_big_nohaplotig	exon	80454141	80454293	99	+	.	Parent=FBgn0037980.1.mrna1;Target=FBgn0037980.1 307 459 +
Chr2	stalkie_big_nohaplotig	exon	80454350	80454751	100	+	.	Parent=FBgn0037980.1.mrna1;Target=FBgn0037980.1 460 861 +
Chr2	stalkie_big_nohaplotig	exon	80454827	80455042	100	+	.	Parent=FBgn0037980.1.mrna1;Target=FBgn0037980.1 862 1077 +
Chr2	stalkie_big_nohaplotig	exon	80455126	80455314	100	+	.	Parent=FBgn0037980.1.mrna1;Target=FBgn0037980.1 1078 1266 +
Chr2	stalkie_big_nohaplotig	exon	80455629	80455778	100	+	.	Parent=FBgn0037980.1.mrna1;Target=FBgn0037980.1 1267 1416 +
Chr2	stalkie_big_nohaplotig	CDS	80453766	80454071	.	+	0	Parent=FBgn0037980.1.mrna1;Target=FBgn0037980.1 1 306 +
Chr2	stalkie_big_nohaplotig	CDS	80454141	80454293	.	+	0	Parent=FBgn0037980.1.mrna1;Target=FBgn0037980.1 307 459 +
Chr2	stalkie_big_nohaplotig	CDS	80454350	80454751	.	+	0	Parent=FBgn0037980.1.mrna1;Target=FBgn0037980.1 460 861 +
Chr2	stalkie_big_nohaplotig	CDS	80454827	80455042	.	+	0	Parent=FBgn0037980.1.mrna1;Target=FBgn0037980.1 862 1077 +
Chr2	stalkie_big_nohaplotig	CDS	80455126	80455314	.	+	0	Parent=FBgn0037980.1.mrna1;Target=FBgn0037980.1 1078 1266 +
Chr2	stalkie_big_nohaplotig	CDS	80455629	80455778	.	+	0	Parent=FBgn0037980.1.mrna1;Target=FBgn0037980.1 1267 1416 +
Chr2	gffcl	locus	80456271	80475236	.	-	.	ID=RLOC_00018881;geneIDs=comp129175_c0_seq1.path1;transcripts=comp129175_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80456271	80475236	.	-	.	ID=comp129175_c0_seq1.mrna1;geneID=comp129175_c0_seq1.path1;Name=comp129175_c0_seq1;Dir=indeterminatecoverage=86.9;identity=99.7;matches=766;mismatches=1;indels=1;unknowns=0;Target=comp129175_c0_seq1 716 627 .;locus=RLOC_00018881
Chr2	stalkie_big_nohaplotig	exon	80456271	80456277	100	-	.	Parent=comp129175_c0_seq1.mrna1;Target=comp129175_c0_seq1 768 762 .
Chr2	stalkie_big_nohaplotig	exon	80474477	80475236	99	-	.	Parent=comp129175_c0_seq1.mrna1;Target=comp129175_c0_seq1 761 1 .
Chr2	stalkie_big_nohaplotig	CDS	80474522	80474610	.	-	0	Parent=comp129175_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80464980	80468680	.	+	.	ID=FBgn0037445.1.mrna1;geneID=FBgn0037445.1.path1;Name=FBgn0037445.1;Dir=sensecoverage=100.0;identity=99.8;matches=3417;mismatches=6;indels=0;unknowns=0;locus=RLOC_00018882
Chr2	stalkie_big_nohaplotig	exon	80464980	80465788	100	+	.	Parent=FBgn0037445.1.mrna1;Target=FBgn0037445.1 1 809 +
Chr2	stalkie_big_nohaplotig	exon	80465857	80465966	100	+	.	Parent=FBgn0037445.1.mrna1;Target=FBgn0037445.1 810 919 +
Chr2	stalkie_big_nohaplotig	exon	80466036	80466168	99	+	.	Parent=FBgn0037445.1.mrna1;Target=FBgn0037445.1 920 1052 +
Chr2	stalkie_big_nohaplotig	exon	80466228	80466684	100	+	.	Parent=FBgn0037445.1.mrna1;Target=FBgn0037445.1 1053 1509 +
Chr2	stalkie_big_nohaplotig	exon	80466767	80468680	99	+	.	Parent=FBgn0037445.1.mrna1;Target=FBgn0037445.1 1510 3423 +
Chr2	stalkie_big_nohaplotig	CDS	80464980	80465788	.	+	0	Parent=FBgn0037445.1.mrna1;Target=FBgn0037445.1 1 809 +
Chr2	stalkie_big_nohaplotig	CDS	80465857	80465966	.	+	1	Parent=FBgn0037445.1.mrna1;Target=FBgn0037445.1 810 919 +
Chr2	stalkie_big_nohaplotig	CDS	80466036	80466168	.	+	2	Parent=FBgn0037445.1.mrna1;Target=FBgn0037445.1 920 1052 +
Chr2	stalkie_big_nohaplotig	CDS	80466228	80466684	.	+	1	Parent=FBgn0037445.1.mrna1;Target=FBgn0037445.1 1053 1509 +
Chr2	stalkie_big_nohaplotig	CDS	80466767	80468680	.	+	0	Parent=FBgn0037445.1.mrna1;Target=FBgn0037445.1 1510 3423 +
Chr2	gffcl	locus	80473577	80536608	.	-	.	ID=RLOC_00018883;geneIDs=comp159438_c2_seq1.path1;transcripts=comp159438_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80473577	80536608	.	-	.	ID=comp159438_c2_seq1.mrna1;geneID=comp159438_c2_seq1.path1;Name=comp159438_c2_seq1;Dir=indeterminatecoverage=85.6;identity=99.6;matches=3707;mismatches=16;indels=0;unknowns=0;Target=comp159438_c2_seq1 3476 948 .;locus=RLOC_00018883
Chr2	stalkie_big_nohaplotig	exon	80473577	80473586	100	-	.	Parent=comp159438_c2_seq1.mrna1;Target=comp159438_c2_seq1 3761 3752 .
Chr2	stalkie_big_nohaplotig	exon	80476487	80476494	100	-	.	Parent=comp159438_c2_seq1.mrna1;Target=comp159438_c2_seq1 3751 3744 .
Chr2	stalkie_big_nohaplotig	exon	80489485	80489486	100	-	.	Parent=comp159438_c2_seq1.mrna1;Target=comp159438_c2_seq1 3743 3742 .
Chr2	stalkie_big_nohaplotig	exon	80494926	80494928	100	-	.	Parent=comp159438_c2_seq1.mrna1;Target=comp159438_c2_seq1 3741 3739 .
Chr2	stalkie_big_nohaplotig	exon	80508318	80508322	100	-	.	Parent=comp159438_c2_seq1.mrna1;Target=comp159438_c2_seq1 3738 3734 .
Chr2	stalkie_big_nohaplotig	exon	80511163	80511165	100	-	.	Parent=comp159438_c2_seq1.mrna1;Target=comp159438_c2_seq1 3733 3731 .
Chr2	stalkie_big_nohaplotig	exon	80515721	80515723	100	-	.	Parent=comp159438_c2_seq1.mrna1;Target=comp159438_c2_seq1 3723 3721 .
Chr2	stalkie_big_nohaplotig	exon	80522249	80522251	100	-	.	Parent=comp159438_c2_seq1.mrna1;Target=comp159438_c2_seq1 3720 3718 .
Chr2	stalkie_big_nohaplotig	exon	80529062	80529064	100	-	.	Parent=comp159438_c2_seq1.mrna1;Target=comp159438_c2_seq1 3717 3715 .
Chr2	stalkie_big_nohaplotig	exon	80532926	80536608	99	-	.	Parent=comp159438_c2_seq1.mrna1;Target=comp159438_c2_seq1 3714 32 .
Chr2	stalkie_big_nohaplotig	CDS	80533164	80535692	.	-	0	Parent=comp159438_c2_seq1.mrna1
Chr2	gffcl	locus	80475345	80475752	.	+	.	ID=RLOC_00018884;geneIDs=comp129975_c0_seq1.path1;transcripts=comp129975_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80475345	80475752	.	+	.	ID=comp129975_c0_seq1.mrna1;geneID=comp129975_c0_seq1.path1;Name=comp129975_c0_seq1;Dir=indeterminatecoverage=95.4;identity=98.8;matches=407;mismatches=1;indels=4;unknowns=0;Target=comp129975_c0_seq1 431 20 .;CDS_Target=comp129975_c0_seq1 203 21 .;locus=RLOC_00018884
Chr2	stalkie_big_nohaplotig	exon	80475345	80475752	98	+	.	Parent=comp129975_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80475346	80475528	.	+	0	Parent=comp129975_c0_seq1.mrna1
Chr2	gffcl	locus	80485226	80485715	.	-	.	ID=RLOC_00018885;geneIDs=comp119304_c0_seq1.path1;transcripts=comp119304_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80485226	80485715	.	-	.	ID=comp119304_c0_seq1.mrna1;geneID=comp119304_c0_seq1.path1;Name=comp119304_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=484;mismatches=6;indels=0;unknowns=0;Target=comp119304_c0_seq1 490 1 .;CDS_Target=comp119304_c0_seq1 52 2 .;locus=RLOC_00018885
Chr2	stalkie_big_nohaplotig	exon	80485226	80485715	98	-	.	Parent=comp119304_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80485664	80485714	.	-	0	Parent=comp119304_c0_seq1.mrna1
Chr2	gffcl	locus	80486106	80487354	.	-	.	ID=RLOC_00018886;geneIDs=comp155642_c0_seq1.path1;transcripts=comp155642_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80486106	80487354	.	-	.	ID=comp155642_c0_seq1.mrna1;geneID=comp155642_c0_seq1.path1;Name=comp155642_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.8;matches=1247;mismatches=2;indels=0;unknowns=0;Target=comp155642_c0_seq1 1254 6 .;CDS_Target=comp155642_c0_seq1 446 330 .;locus=RLOC_00018886
Chr2	stalkie_big_nohaplotig	exon	80486106	80487354	99	-	.	Parent=comp155642_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80486914	80487030	.	-	0	Parent=comp155642_c0_seq1.mrna1
Chr2	gffcl	locus	80490390	80490732	.	-	.	ID=RLOC_00018887;geneIDs=comp93107_c0_seq1.path1;transcripts=comp93107_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80490390	80490732	.	-	.	ID=comp93107_c0_seq1.mrna1;geneID=comp93107_c0_seq1.path1;Name=comp93107_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=341;mismatches=2;indels=0;unknowns=0;Target=comp93107_c0_seq1 343 1 .;CDS_Target=comp93107_c0_seq1 301 218 .;locus=RLOC_00018887
Chr2	stalkie_big_nohaplotig	exon	80490390	80490732	99	-	.	Parent=comp93107_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80490432	80490515	.	-	0	Parent=comp93107_c0_seq1.mrna1
Chr2	gffcl	locus	80500195	80503425	.	-	.	ID=RLOC_00018888;geneIDs=FBgn0264495.path1;transcripts=FBgn0264495.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80500195	80503425	.	-	.	ID=FBgn0264495.mrna1;geneID=FBgn0264495.path1;Name=FBgn0264495;Dir=sensecoverage=100.0;identity=100.0;matches=1230;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018888
Chr2	stalkie_big_nohaplotig	exon	80500195	80500370	100	-	.	Parent=FBgn0264495.mrna1;Target=FBgn0264495 1055 1230 +
Chr2	stalkie_big_nohaplotig	exon	80500779	80500954	100	-	.	Parent=FBgn0264495.mrna1;Target=FBgn0264495 879 1054 +
Chr2	stalkie_big_nohaplotig	exon	80501043	80501626	100	-	.	Parent=FBgn0264495.mrna1;Target=FBgn0264495 295 878 +
Chr2	stalkie_big_nohaplotig	exon	80503132	80503425	100	-	.	Parent=FBgn0264495.mrna1;Target=FBgn0264495 1 294 +
Chr2	stalkie_big_nohaplotig	CDS	80500195	80500370	.	-	2	Parent=FBgn0264495.mrna1;Target=FBgn0264495 1055 1230 +
Chr2	stalkie_big_nohaplotig	CDS	80500779	80500954	.	-	1	Parent=FBgn0264495.mrna1;Target=FBgn0264495 879 1054 +
Chr2	stalkie_big_nohaplotig	CDS	80501043	80501626	.	-	0	Parent=FBgn0264495.mrna1;Target=FBgn0264495 295 878 +
Chr2	stalkie_big_nohaplotig	CDS	80503132	80503425	.	-	0	Parent=FBgn0264495.mrna1;Target=FBgn0264495 1 294 +
Chr2	gffcl	locus	80503761	80504489	.	-	.	ID=RLOC_00018889;geneIDs=comp144026_c0_seq1.path1;transcripts=comp144026_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80503761	80504489	.	-	.	ID=comp144026_c0_seq1.mrna1;geneID=comp144026_c0_seq1.path1;Name=comp144026_c0_seq1;Dir=indeterminatecoverage=73.0;identity=99.9;matches=728;mismatches=1;indels=0;unknowns=0;Target=comp144026_c0_seq1 983 255 .;CDS_Target=comp144026_c0_seq1 744 541 .;locus=RLOC_00018889
Chr2	stalkie_big_nohaplotig	exon	80503761	80504489	99	-	.	Parent=comp144026_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80504000	80504203	.	-	0	Parent=comp144026_c0_seq1.mrna1
Chr2	gffcl	locus	80530406	80530714	.	+	.	ID=RLOC_00018890;geneIDs=comp149403_c0_seq1.path1;transcripts=comp149403_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80530406	80530714	.	+	.	ID=comp149403_c0_seq1.mrna1;geneID=comp149403_c0_seq1.path1;Name=comp149403_c0_seq1;Dir=indeterminatecoverage=99.7;identity=97.7;matches=302;mismatches=7;indels=0;unknowns=0;Target=comp149403_c0_seq1 309 1 .;CDS_Target=comp149403_c0_seq1 86 3 .;locus=RLOC_00018890
Chr2	stalkie_big_nohaplotig	exon	80530406	80530714	97	+	.	Parent=comp149403_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80530408	80530491	.	+	0	Parent=comp149403_c0_seq1.mrna1
Chr2	gffcl	locus	80539506	82490487	.	-	.	ID=RLOC_00018891;geneIDs=comp49812_c0_seq1.path1;transcripts=comp49812_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80539506	82490487	.	-	.	ID=comp49812_c0_seq1.mrna1;geneID=comp49812_c0_seq1.path1;Name=comp49812_c0_seq1;Dir=indeterminatecoverage=89.7;identity=97.6;matches=409;mismatches=10;indels=0;unknowns=0;Target=comp49812_c0_seq1 260 168 .;locus=RLOC_00018891
Chr2	stalkie_big_nohaplotig	exon	80539506	80539512	100	-	.	Parent=comp49812_c0_seq1.mrna1;Target=comp49812_c0_seq1 420 414 .
Chr2	stalkie_big_nohaplotig	exon	80542188	80542196	100	-	.	Parent=comp49812_c0_seq1.mrna1;Target=comp49812_c0_seq1 413 405 .
Chr2	stalkie_big_nohaplotig	exon	80545501	80545518	72	-	.	Parent=comp49812_c0_seq1.mrna1;Target=comp49812_c0_seq1 404 387 .
Chr2	stalkie_big_nohaplotig	exon	80547045	80547048	100	-	.	Parent=comp49812_c0_seq1.mrna1;Target=comp49812_c0_seq1 386 383 .
Chr2	stalkie_big_nohaplotig	exon	80547446	80547449	100	-	.	Parent=comp49812_c0_seq1.mrna1;Target=comp49812_c0_seq1 382 379 .
Chr2	stalkie_big_nohaplotig	exon	82490111	82490487	98	-	.	Parent=comp49812_c0_seq1.mrna1;Target=comp49812_c0_seq1 378 2 .
Chr2	stalkie_big_nohaplotig	CDS	82490229	82490321	.	-	0	Parent=comp49812_c0_seq1.mrna1
Chr2	gffcl	locus	80558809	80559232	.	-	.	ID=RLOC_00018892;geneIDs=comp139308_c0_seq1.path1;transcripts=comp139308_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80558809	80559232	.	-	.	ID=comp139308_c0_seq1.mrna1;geneID=comp139308_c0_seq1.path1;Name=comp139308_c0_seq1;Dir=indeterminatecoverage=99.3;identity=98.1;matches=418;mismatches=6;indels=2;unknowns=0;Target=comp139308_c0_seq1 427 2 .;CDS_Target=comp139308_c0_seq1 425 81 .;locus=RLOC_00018892
Chr2	stalkie_big_nohaplotig	exon	80558809	80559232	98	-	.	Parent=comp139308_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80558811	80559153	.	-	0	Parent=comp139308_c0_seq1.mrna1
Chr2	gffcl	locus	80566010	80568789	.	+	.	ID=RLOC_00018893;geneIDs=FBgn0250757.1.path1;transcripts=FBgn0250757.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80566010	80568789	.	+	.	ID=FBgn0250757.1.mrna1;geneID=FBgn0250757.1.path1;Name=FBgn0250757.1;Dir=sensecoverage=100.0;identity=99.7;matches=1442;mismatches=4;indels=0;unknowns=0;locus=RLOC_00018893
Chr2	stalkie_big_nohaplotig	exon	80566010	80566075	100	+	.	Parent=FBgn0250757.1.mrna1;Target=FBgn0250757.1 1 66 +
Chr2	stalkie_big_nohaplotig	exon	80566499	80566550	100	+	.	Parent=FBgn0250757.1.mrna1;Target=FBgn0250757.1 67 118 +
Chr2	stalkie_big_nohaplotig	exon	80566606	80566673	100	+	.	Parent=FBgn0250757.1.mrna1;Target=FBgn0250757.1 119 186 +
Chr2	stalkie_big_nohaplotig	exon	80567259	80567413	100	+	.	Parent=FBgn0250757.1.mrna1;Target=FBgn0250757.1 187 341 +
Chr2	stalkie_big_nohaplotig	exon	80567495	80567744	99	+	.	Parent=FBgn0250757.1.mrna1;Target=FBgn0250757.1 342 591 +
Chr2	stalkie_big_nohaplotig	exon	80567807	80568187	100	+	.	Parent=FBgn0250757.1.mrna1;Target=FBgn0250757.1 592 972 +
Chr2	stalkie_big_nohaplotig	exon	80568242	80568411	100	+	.	Parent=FBgn0250757.1.mrna1;Target=FBgn0250757.1 973 1142 +
Chr2	stalkie_big_nohaplotig	exon	80568486	80568789	99	+	.	Parent=FBgn0250757.1.mrna1;Target=FBgn0250757.1 1143 1446 +
Chr2	stalkie_big_nohaplotig	CDS	80566010	80566075	.	+	0	Parent=FBgn0250757.1.mrna1;Target=FBgn0250757.1 1 66 +
Chr2	stalkie_big_nohaplotig	CDS	80566499	80566550	.	+	0	Parent=FBgn0250757.1.mrna1;Target=FBgn0250757.1 67 118 +
Chr2	stalkie_big_nohaplotig	CDS	80566606	80566673	.	+	2	Parent=FBgn0250757.1.mrna1;Target=FBgn0250757.1 119 186 +
Chr2	stalkie_big_nohaplotig	CDS	80567259	80567413	.	+	0	Parent=FBgn0250757.1.mrna1;Target=FBgn0250757.1 187 341 +
Chr2	stalkie_big_nohaplotig	CDS	80567495	80567744	.	+	1	Parent=FBgn0250757.1.mrna1;Target=FBgn0250757.1 342 591 +
Chr2	stalkie_big_nohaplotig	CDS	80567807	80568187	.	+	0	Parent=FBgn0250757.1.mrna1;Target=FBgn0250757.1 592 972 +
Chr2	stalkie_big_nohaplotig	CDS	80568242	80568411	.	+	0	Parent=FBgn0250757.1.mrna1;Target=FBgn0250757.1 973 1142 +
Chr2	stalkie_big_nohaplotig	CDS	80568486	80568789	.	+	1	Parent=FBgn0250757.1.mrna1;Target=FBgn0250757.1 1143 1446 +
Chr2	gffcl	locus	80569315	80572839	.	+	.	ID=RLOC_00018894;geneIDs=FBgn0250757.3.path1;transcripts=FBgn0250757.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80569315	80572839	.	+	.	ID=FBgn0250757.3.mrna1;geneID=FBgn0250757.3.path1;Name=FBgn0250757.3;Dir=sensecoverage=100.0;identity=99.6;matches=1358;mismatches=5;indels=0;unknowns=8;locus=RLOC_00018894
Chr2	stalkie_big_nohaplotig	exon	80569315	80569380	100	+	.	Parent=FBgn0250757.3.mrna1;Target=FBgn0250757.3 1 66 +
Chr2	stalkie_big_nohaplotig	exon	80569472	80569523	100	+	.	Parent=FBgn0250757.3.mrna1;Target=FBgn0250757.3 67 118 +
Chr2	stalkie_big_nohaplotig	exon	80570095	80570162	100	+	.	Parent=FBgn0250757.3.mrna1;Target=FBgn0250757.3 119 186 +
Chr2	stalkie_big_nohaplotig	exon	80571320	80571474	99	+	.	Parent=FBgn0250757.3.mrna1;Target=FBgn0250757.3 187 341 +
Chr2	stalkie_big_nohaplotig	exon	80571532	80571781	100	+	.	Parent=FBgn0250757.3.mrna1;Target=FBgn0250757.3 342 591 +
Chr2	stalkie_big_nohaplotig	exon	80571860	80572240	99	+	.	Parent=FBgn0250757.3.mrna1;Target=FBgn0250757.3 592 972 +
Chr2	stalkie_big_nohaplotig	exon	80572372	80572541	100	+	.	Parent=FBgn0250757.3.mrna1;Target=FBgn0250757.3 973 1142 +
Chr2	stalkie_big_nohaplotig	exon	80572611	80572839	99	+	.	Parent=FBgn0250757.3.mrna1;Target=FBgn0250757.3 1143 1371 +
Chr2	stalkie_big_nohaplotig	CDS	80569315	80569380	.	+	0	Parent=FBgn0250757.3.mrna1;Target=FBgn0250757.3 1 66 +
Chr2	stalkie_big_nohaplotig	CDS	80569472	80569523	.	+	0	Parent=FBgn0250757.3.mrna1;Target=FBgn0250757.3 67 118 +
Chr2	stalkie_big_nohaplotig	CDS	80570095	80570162	.	+	2	Parent=FBgn0250757.3.mrna1;Target=FBgn0250757.3 119 186 +
Chr2	stalkie_big_nohaplotig	CDS	80571320	80571474	.	+	0	Parent=FBgn0250757.3.mrna1;Target=FBgn0250757.3 187 341 +
Chr2	stalkie_big_nohaplotig	CDS	80571532	80571781	.	+	1	Parent=FBgn0250757.3.mrna1;Target=FBgn0250757.3 342 591 +
Chr2	stalkie_big_nohaplotig	CDS	80571860	80572240	.	+	0	Parent=FBgn0250757.3.mrna1;Target=FBgn0250757.3 592 972 +
Chr2	stalkie_big_nohaplotig	CDS	80572372	80572541	.	+	0	Parent=FBgn0250757.3.mrna1;Target=FBgn0250757.3 973 1142 +
Chr2	stalkie_big_nohaplotig	CDS	80572611	80572839	.	+	1	Parent=FBgn0250757.3.mrna1;Target=FBgn0250757.3 1143 1371 +
Chr2	gffcl	locus	80573659	80577560	.	+	.	ID=RLOC_00018895;geneIDs=FBgn0250757.2.path1;transcripts=FBgn0250757.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80573659	80577560	.	+	.	ID=FBgn0250757.2.mrna1;geneID=FBgn0250757.2.path1;Name=FBgn0250757.2;Dir=sensecoverage=98.8;identity=99.9;matches=1421;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018895
Chr2	stalkie_big_nohaplotig	exon	80573659	80573724	98	+	.	Parent=FBgn0250757.2.mrna1;Target=FBgn0250757.2 19 84 +
Chr2	stalkie_big_nohaplotig	exon	80573895	80573946	100	+	.	Parent=FBgn0250757.2.mrna1;Target=FBgn0250757.2 85 136 +
Chr2	stalkie_big_nohaplotig	exon	80575175	80575242	100	+	.	Parent=FBgn0250757.2.mrna1;Target=FBgn0250757.2 137 204 +
Chr2	stalkie_big_nohaplotig	exon	80576066	80576220	100	+	.	Parent=FBgn0250757.2.mrna1;Target=FBgn0250757.2 205 359 +
Chr2	stalkie_big_nohaplotig	exon	80576286	80576535	100	+	.	Parent=FBgn0250757.2.mrna1;Target=FBgn0250757.2 360 609 +
Chr2	stalkie_big_nohaplotig	exon	80576602	80576982	100	+	.	Parent=FBgn0250757.2.mrna1;Target=FBgn0250757.2 610 990 +
Chr2	stalkie_big_nohaplotig	exon	80577043	80577212	100	+	.	Parent=FBgn0250757.2.mrna1;Target=FBgn0250757.2 991 1160 +
Chr2	stalkie_big_nohaplotig	exon	80577281	80577560	100	+	.	Parent=FBgn0250757.2.mrna1;Target=FBgn0250757.2 1161 1440 +
Chr2	stalkie_big_nohaplotig	CDS	80573659	80573724	.	+	0	Parent=FBgn0250757.2.mrna1;Target=FBgn0250757.2 19 84 +
Chr2	stalkie_big_nohaplotig	CDS	80573895	80573946	.	+	0	Parent=FBgn0250757.2.mrna1;Target=FBgn0250757.2 85 136 +
Chr2	stalkie_big_nohaplotig	CDS	80575175	80575242	.	+	2	Parent=FBgn0250757.2.mrna1;Target=FBgn0250757.2 137 204 +
Chr2	stalkie_big_nohaplotig	CDS	80576066	80576220	.	+	0	Parent=FBgn0250757.2.mrna1;Target=FBgn0250757.2 205 359 +
Chr2	stalkie_big_nohaplotig	CDS	80576286	80576535	.	+	1	Parent=FBgn0250757.2.mrna1;Target=FBgn0250757.2 360 609 +
Chr2	stalkie_big_nohaplotig	CDS	80576602	80576982	.	+	0	Parent=FBgn0250757.2.mrna1;Target=FBgn0250757.2 610 990 +
Chr2	stalkie_big_nohaplotig	CDS	80577043	80577212	.	+	0	Parent=FBgn0250757.2.mrna1;Target=FBgn0250757.2 991 1160 +
Chr2	stalkie_big_nohaplotig	CDS	80577281	80577560	.	+	1	Parent=FBgn0250757.2.mrna1;Target=FBgn0250757.2 1161 1440 +
Chr2	gffcl	locus	80578086	80579575	.	+	.	ID=RLOC_00018896;geneIDs=ORF2073.path1;transcripts=ORF2073.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80578086	80579575	.	+	.	ID=ORF2073.mrna1;geneID=ORF2073.path1;Name=ORF2073;Dir=sensecoverage=100.0;identity=99.7;matches=921;mismatches=0;indels=3;unknowns=0;locus=RLOC_00018896
Chr2	stalkie_big_nohaplotig	exon	80578086	80578370	98	+	.	Parent=ORF2073.mrna1;Target=ORF2073 1 288 +
Chr2	stalkie_big_nohaplotig	exon	80578447	80578495	100	+	.	Parent=ORF2073.mrna1;Target=ORF2073 289 337 +
Chr2	stalkie_big_nohaplotig	exon	80578989	80579575	100	+	.	Parent=ORF2073.mrna1;Target=ORF2073 338 924 +
Chr2	stalkie_big_nohaplotig	CDS	80578086	80578370	.	+	0	Parent=ORF2073.mrna1;Target=ORF2073 1 288 +
Chr2	stalkie_big_nohaplotig	CDS	80578447	80578495	.	+	0	Parent=ORF2073.mrna1;Target=ORF2073 289 337 +
Chr2	stalkie_big_nohaplotig	CDS	80578989	80579575	.	+	2	Parent=ORF2073.mrna1;Target=ORF2073 338 924 +
Chr2	gffcl	locus	80583019	80584357	.	+	.	ID=RLOC_00018897;geneIDs=ORF1296.path1;transcripts=ORF1296.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80583019	80584357	.	+	.	ID=ORF1296.mrna1;geneID=ORF1296.path1;Name=ORF1296;Dir=sensecoverage=100.0;identity=99.9;matches=1151;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018897
Chr2	stalkie_big_nohaplotig	exon	80583019	80583501	99	+	.	Parent=ORF1296.mrna1;Target=ORF1296 1 483 +
Chr2	stalkie_big_nohaplotig	exon	80583585	80583708	100	+	.	Parent=ORF1296.mrna1;Target=ORF1296 484 607 +
Chr2	stalkie_big_nohaplotig	exon	80583813	80584357	100	+	.	Parent=ORF1296.mrna1;Target=ORF1296 608 1152 +
Chr2	stalkie_big_nohaplotig	CDS	80583019	80583501	.	+	0	Parent=ORF1296.mrna1;Target=ORF1296 1 483 +
Chr2	stalkie_big_nohaplotig	CDS	80583585	80583708	.	+	0	Parent=ORF1296.mrna1;Target=ORF1296 484 607 +
Chr2	stalkie_big_nohaplotig	CDS	80583813	80584357	.	+	2	Parent=ORF1296.mrna1;Target=ORF1296 608 1152 +
Chr2	gffcl	locus	80594825	80953298	.	-	.	ID=RLOC_00018898;geneIDs=FBgn0039396.1.path1;transcripts=FBgn0039396.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80594825	80953298	.	-	.	ID=FBgn0039396.1.mrna1;geneID=FBgn0039396.1.path1;Name=FBgn0039396.1;Dir=sensecoverage=90.1;identity=96.4;matches=1302;mismatches=29;indels=19;unknowns=0;locus=RLOC_00018898
Chr2	stalkie_big_nohaplotig	exon	80594825	80595041	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 1524 1740 +
Chr2	stalkie_big_nohaplotig	exon	80595144	80595420	99	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 1247 1523 +
Chr2	stalkie_big_nohaplotig	exon	80597057	80597317	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 986 1246 +
Chr2	stalkie_big_nohaplotig	exon	80597681	80597878	99	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 788 985 +
Chr2	stalkie_big_nohaplotig	exon	80600144	80600279	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 652 787 +
Chr2	stalkie_big_nohaplotig	exon	80606234	80606235	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 650 651 +
Chr2	stalkie_big_nohaplotig	exon	80620241	80620247	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 643 649 +
Chr2	stalkie_big_nohaplotig	exon	80644175	80644179	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 638 642 +
Chr2	stalkie_big_nohaplotig	exon	80659284	80659288	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 633 637 +
Chr2	stalkie_big_nohaplotig	exon	80664847	80664852	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 627 632 +
Chr2	stalkie_big_nohaplotig	exon	80669566	80669577	92	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 614 626 +
Chr2	stalkie_big_nohaplotig	exon	80671861	80671869	66	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 605 613 +
Chr2	stalkie_big_nohaplotig	exon	80693938	80693944	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 598 604 +
Chr2	stalkie_big_nohaplotig	exon	80693949	80693954	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 557 562 +
Chr2	stalkie_big_nohaplotig	exon	80706716	80706725	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 519 528 +
Chr2	stalkie_big_nohaplotig	exon	80714591	80714595	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 514 518 +
Chr2	stalkie_big_nohaplotig	exon	80731238	80731243	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 508 513 +
Chr2	stalkie_big_nohaplotig	exon	80733094	80733097	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 504 507 +
Chr2	stalkie_big_nohaplotig	exon	80736888	80736939	54	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 444 503 +
Chr2	stalkie_big_nohaplotig	exon	80807221	80807231	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 286 296 +
Chr2	stalkie_big_nohaplotig	exon	80811345	80811346	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 284 285 +
Chr2	stalkie_big_nohaplotig	exon	80815610	80815611	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 282 283 +
Chr2	stalkie_big_nohaplotig	exon	80817085	80817090	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 265 270 +
Chr2	stalkie_big_nohaplotig	exon	80824914	80824921	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 257 264 +
Chr2	stalkie_big_nohaplotig	exon	80834100	80834105	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 251 256 +
Chr2	stalkie_big_nohaplotig	exon	80843284	80843286	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 248 250 +
Chr2	stalkie_big_nohaplotig	exon	80850693	80850696	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 244 247 +
Chr2	stalkie_big_nohaplotig	exon	80855853	80855855	100	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 241 243 +
Chr2	stalkie_big_nohaplotig	exon	80900286	80900309	80	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 216 240 +
Chr2	stalkie_big_nohaplotig	exon	80907901	80907903	66	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 213 215 +
Chr2	stalkie_big_nohaplotig	exon	80920871	80920881	90	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 202 212 +
Chr2	stalkie_big_nohaplotig	exon	80945722	80945733	83	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 190 201 +
Chr2	stalkie_big_nohaplotig	exon	80953288	80953298	68	-	.	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 174 189 +
Chr2	stalkie_big_nohaplotig	CDS	80594825	80595041	.	-	1	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 1524 1740 +
Chr2	stalkie_big_nohaplotig	CDS	80595144	80595420	.	-	2	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 1247 1523 +
Chr2	stalkie_big_nohaplotig	CDS	80597057	80597317	.	-	2	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 986 1246 +
Chr2	stalkie_big_nohaplotig	CDS	80597681	80597878	.	-	2	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 788 985 +
Chr2	stalkie_big_nohaplotig	CDS	80600144	80600207	.	-	0	Parent=FBgn0039396.1.mrna1;Target=FBgn0039396.1 724 787 +
Chr2	gffcl	locus	80622000	80690804	.	-	.	ID=RLOC_00018899;geneIDs=FBgn0038481.1.path1;transcripts=FBgn0038481.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80622000	80690804	.	-	.	ID=FBgn0038481.1.mrna1;geneID=FBgn0038481.1.path1;Name=FBgn0038481.1;Dir=indeterminatecoverage=6.4;identity=100.0;matches=44;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018899
Chr2	stalkie_big_nohaplotig	exon	80622000	80622001	100	-	.	Parent=FBgn0038481.1.mrna1;Target=FBgn0038481.1 646 645 .
Chr2	stalkie_big_nohaplotig	exon	80630065	80630069	100	-	.	Parent=FBgn0038481.1.mrna1;Target=FBgn0038481.1 644 640 .
Chr2	stalkie_big_nohaplotig	exon	80638381	80638390	100	-	.	Parent=FBgn0038481.1.mrna1;Target=FBgn0038481.1 637 628 .
Chr2	stalkie_big_nohaplotig	exon	80642817	80642822	100	-	.	Parent=FBgn0038481.1.mrna1;Target=FBgn0038481.1 627 622 .
Chr2	stalkie_big_nohaplotig	exon	80665905	80665909	100	-	.	Parent=FBgn0038481.1.mrna1;Target=FBgn0038481.1 621 617 .
Chr2	stalkie_big_nohaplotig	exon	80678646	80678650	100	-	.	Parent=FBgn0038481.1.mrna1;Target=FBgn0038481.1 616 612 .
Chr2	stalkie_big_nohaplotig	exon	80690794	80690804	100	-	.	Parent=FBgn0038481.1.mrna1;Target=FBgn0038481.1 601 591 .
Chr2	stalkie_big_nohaplotig	CDS	80630065	80630069	.	-	0	Parent=FBgn0038481.1.mrna1;Target=FBgn0038481.1 644 640 .
Chr2	stalkie_big_nohaplotig	CDS	80638381	80638390	.	-	1	Parent=FBgn0038481.1.mrna1;Target=FBgn0038481.1 637 628 .
Chr2	stalkie_big_nohaplotig	CDS	80642817	80642822	.	-	1	Parent=FBgn0038481.1.mrna1;Target=FBgn0038481.1 627 622 .
Chr2	stalkie_big_nohaplotig	CDS	80665905	80665909	.	-	0	Parent=FBgn0038481.1.mrna1;Target=FBgn0038481.1 621 617 .
Chr2	stalkie_big_nohaplotig	CDS	80678646	80678650	.	-	2	Parent=FBgn0038481.1.mrna1;Target=FBgn0038481.1 616 612 .
Chr2	stalkie_big_nohaplotig	CDS	80690794	80690803	.	-	0	Parent=FBgn0038481.1.mrna1;Target=FBgn0038481.1 601 592 .
Chr2	gffcl	locus	80725767	80726564	.	-	.	ID=RLOC_00018900;geneIDs=FBgn0051269.2.path1;transcripts=FBgn0051269.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80725767	80726564	.	-	.	ID=FBgn0051269.2.mrna1;geneID=FBgn0051269.2.path1;Name=FBgn0051269.2;Dir=indeterminatecoverage=100.0;identity=98.7;matches=788;mismatches=10;indels=0;unknowns=0;Target=FBgn0051269.2 798 1 .;locus=RLOC_00018900
Chr2	stalkie_big_nohaplotig	exon	80725767	80726564	98	-	.	Parent=FBgn0051269.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80725767	80726564	.	-	0	Parent=FBgn0051269.2.mrna1
Chr2	gffcl	locus	80778404	80779243	.	-	.	ID=RLOC_00018901;geneIDs=FBgn0038482.1.path1;transcripts=FBgn0038482.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80778404	80779243	.	-	.	ID=FBgn0038482.1.mrna1;geneID=FBgn0038482.1.path1;Name=FBgn0038482.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=834;mismatches=6;indels=0;unknowns=0;Target=FBgn0038482.1 840 1 .;locus=RLOC_00018901
Chr2	stalkie_big_nohaplotig	exon	80778404	80779243	99	-	.	Parent=FBgn0038482.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80778404	80779243	.	-	0	Parent=FBgn0038482.1.mrna1
Chr2	gffcl	locus	80781073	80781577	.	+	.	ID=RLOC_00018902;geneIDs=FBgn0051267.1.path1;transcripts=FBgn0051267.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80781073	80781577	.	+	.	ID=FBgn0051267.1.mrna1;geneID=FBgn0051267.1.path1;Name=FBgn0051267.1;Dir=indeterminatecoverage=97.3;identity=99.0;matches=500;mismatches=5;indels=0;unknowns=0;Target=FBgn0051267.1 505 1 .;CDS_Target=FBgn0051267.1 504 1 .;locus=RLOC_00018902
Chr2	stalkie_big_nohaplotig	exon	80781073	80781577	99	+	.	Parent=FBgn0051267.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80781073	80781576	.	+	0	Parent=FBgn0051267.1.mrna1
Chr2	gffcl	locus	80785754	80786563	.	+	.	ID=RLOC_00018903;geneIDs=FBgn0038484.1.path1;transcripts=FBgn0038484.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80785754	80786563	.	+	.	ID=FBgn0038484.1.mrna1;geneID=FBgn0038484.1.path1;Name=FBgn0038484.1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=799;mismatches=11;indels=0;unknowns=0;Target=FBgn0038484.1 810 1 .;locus=RLOC_00018903
Chr2	stalkie_big_nohaplotig	exon	80785754	80786563	98	+	.	Parent=FBgn0038484.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80785754	80786563	.	+	0	Parent=FBgn0038484.1.mrna1
Chr2	gffcl	locus	80787776	80788815	.	-	.	ID=RLOC_00018904;geneIDs=FBgn0038485.1.path1;transcripts=FBgn0038485.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80787776	80788815	.	-	.	ID=FBgn0038485.1.mrna1;geneID=FBgn0038485.1.path1;Name=FBgn0038485.1;Dir=sensecoverage=100.0;identity=99.4;matches=951;mismatches=6;indels=0;unknowns=0;locus=RLOC_00018904
Chr2	stalkie_big_nohaplotig	exon	80787776	80788221	98	-	.	Parent=FBgn0038485.1.mrna1;Target=FBgn0038485.1 512 957 +
Chr2	stalkie_big_nohaplotig	exon	80788305	80788815	99	-	.	Parent=FBgn0038485.1.mrna1;Target=FBgn0038485.1 1 511 +
Chr2	stalkie_big_nohaplotig	CDS	80787776	80788221	.	-	2	Parent=FBgn0038485.1.mrna1;Target=FBgn0038485.1 512 957 +
Chr2	stalkie_big_nohaplotig	CDS	80788305	80788815	.	-	0	Parent=FBgn0038485.1.mrna1;Target=FBgn0038485.1 1 511 +
Chr2	gffcl	locus	80874861	80875145	.	-	.	ID=RLOC_00018906;geneIDs=comp160314_c2_seq1.path2;transcripts=comp160314_c2_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	80874861	80875145	.	-	.	ID=comp160314_c2_seq1.mrna2;geneID=comp160314_c2_seq1.path2;Name=comp160314_c2_seq1;Dir=indeterminatecoverage=10.2;identity=95.5;matches=278;mismatches=1;indels=12;unknowns=0;Target=comp160314_c2_seq1 2807 2523 .;locus=RLOC_00018906
Chr2	stalkie_big_nohaplotig	exon	80874861	80875145	95	-	.	Parent=comp160314_c2_seq1.mrna2
Chr2	gffcl	locus	80939023	80943400	.	-	.	ID=RLOC_00018907;geneIDs=FBgn0003900.path1;transcripts=FBgn0003900.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80939023	80943400	.	-	.	ID=FBgn0003900.mrna1;geneID=FBgn0003900.path1;Name=FBgn0003900;Dir=sensecoverage=100.0;identity=98.9;matches=730;mismatches=8;indels=0;unknowns=0;locus=RLOC_00018907
Chr2	stalkie_big_nohaplotig	exon	80939023	80939263	98	-	.	Parent=FBgn0003900.mrna1;Target=FBgn0003900 498 738 +
Chr2	stalkie_big_nohaplotig	exon	80942904	80943400	98	-	.	Parent=FBgn0003900.mrna1;Target=FBgn0003900 1 497 +
Chr2	stalkie_big_nohaplotig	CDS	80939023	80939263	.	-	1	Parent=FBgn0003900.mrna1;Target=FBgn0003900 498 738 +
Chr2	stalkie_big_nohaplotig	CDS	80942904	80943400	.	-	0	Parent=FBgn0003900.mrna1;Target=FBgn0003900 1 497 +
Chr2	gffcl	locus	80943427	80944398	.	+	.	ID=RLOC_00018908;geneIDs=comp151544_c1_seq1.path1;transcripts=comp151544_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	80943427	80944398	.	+	.	ID=comp151544_c1_seq1.mrna1;geneID=comp151544_c1_seq1.path1;Name=comp151544_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=965;mismatches=7;indels=1;unknowns=0;Target=comp151544_c1_seq1 973 1 .;CDS_Target=comp151544_c1_seq1 215 51 .;locus=RLOC_00018908
Chr2	stalkie_big_nohaplotig	exon	80943427	80944398	99	+	.	Parent=comp151544_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	80943477	80943641	.	+	0	Parent=comp151544_c1_seq1.mrna1
Chr2	gffcl	locus	81021397	81026796	.	+	.	ID=RLOC_00018909;geneIDs=FBgn0000206.1.path1;transcripts=FBgn0000206.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81021397	81026796	.	+	.	ID=FBgn0000206.1.mrna1;geneID=FBgn0000206.1.path1;Name=FBgn0000206.1;Dir=sensecoverage=100.0;identity=99.4;matches=2632;mismatches=17;indels=0;unknowns=0;locus=RLOC_00018909
Chr2	stalkie_big_nohaplotig	exon	81021397	81021469	100	+	.	Parent=FBgn0000206.1.mrna1;Target=FBgn0000206.1 1 73 +
Chr2	stalkie_big_nohaplotig	exon	81023655	81024083	99	+	.	Parent=FBgn0000206.1.mrna1;Target=FBgn0000206.1 74 502 +
Chr2	stalkie_big_nohaplotig	exon	81024145	81024594	99	+	.	Parent=FBgn0000206.1.mrna1;Target=FBgn0000206.1 503 952 +
Chr2	stalkie_big_nohaplotig	exon	81024661	81026105	99	+	.	Parent=FBgn0000206.1.mrna1;Target=FBgn0000206.1 953 2397 +
Chr2	stalkie_big_nohaplotig	exon	81026545	81026796	100	+	.	Parent=FBgn0000206.1.mrna1;Target=FBgn0000206.1 2398 2649 +
Chr2	stalkie_big_nohaplotig	CDS	81021397	81021469	.	+	0	Parent=FBgn0000206.1.mrna1;Target=FBgn0000206.1 1 73 +
Chr2	stalkie_big_nohaplotig	CDS	81023655	81024083	.	+	2	Parent=FBgn0000206.1.mrna1;Target=FBgn0000206.1 74 502 +
Chr2	stalkie_big_nohaplotig	CDS	81024145	81024594	.	+	2	Parent=FBgn0000206.1.mrna1;Target=FBgn0000206.1 503 952 +
Chr2	stalkie_big_nohaplotig	CDS	81024661	81026105	.	+	2	Parent=FBgn0000206.1.mrna1;Target=FBgn0000206.1 953 2397 +
Chr2	stalkie_big_nohaplotig	CDS	81026545	81026796	.	+	0	Parent=FBgn0000206.1.mrna1;Target=FBgn0000206.1 2398 2649 +
Chr2	gffcl	locus	81088909	81090392	.	+	.	ID=RLOC_00018910;geneIDs=FBgn0039398.1.path1;transcripts=FBgn0039398.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81088909	81090392	.	+	.	ID=FBgn0039398.1.mrna1;geneID=FBgn0039398.1.path1;Name=FBgn0039398.1;Dir=sensecoverage=100.0;identity=99.6;matches=1321;mismatches=2;indels=3;unknowns=0;locus=RLOC_00018910
Chr2	stalkie_big_nohaplotig	exon	81088909	81089478	99	+	.	Parent=FBgn0039398.1.mrna1;Target=FBgn0039398.1 1 570 +
Chr2	stalkie_big_nohaplotig	exon	81089543	81089666	100	+	.	Parent=FBgn0039398.1.mrna1;Target=FBgn0039398.1 571 694 +
Chr2	stalkie_big_nohaplotig	exon	81089761	81090392	99	+	.	Parent=FBgn0039398.1.mrna1;Target=FBgn0039398.1 695 1323 +
Chr2	stalkie_big_nohaplotig	CDS	81088909	81089478	.	+	0	Parent=FBgn0039398.1.mrna1;Target=FBgn0039398.1 1 570 +
Chr2	stalkie_big_nohaplotig	CDS	81089543	81089666	.	+	0	Parent=FBgn0039398.1.mrna1;Target=FBgn0039398.1 571 694 +
Chr2	stalkie_big_nohaplotig	CDS	81089761	81090392	.	+	2	Parent=FBgn0039398.1.mrna1;Target=FBgn0039398.1 695 1323 +
Chr2	gffcl	locus	81095710	81104985	.	-	.	ID=RLOC_00018911;geneIDs=FBgn0038481.1.path2;transcripts=FBgn0038481.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	81095710	81104985	.	-	.	ID=FBgn0038481.1.mrna2;geneID=FBgn0038481.1.path2;Name=FBgn0038481.1;Dir=indeterminatecoverage=10.5;identity=94.7;matches=36;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018911
Chr2	stalkie_big_nohaplotig	exon	81095710	81095717	100	-	.	Parent=FBgn0038481.1.mrna2;Target=FBgn0038481.1 131 124 .
Chr2	stalkie_big_nohaplotig	exon	81095748	81095756	100	-	.	Parent=FBgn0038481.1.mrna2;Target=FBgn0038481.1 70 62 .
Chr2	stalkie_big_nohaplotig	exon	81099403	81099411	77	-	.	Parent=FBgn0038481.1.mrna2;Target=FBgn0038481.1 61 53 .
Chr2	stalkie_big_nohaplotig	exon	81101447	81101453	100	-	.	Parent=FBgn0038481.1.mrna2;Target=FBgn0038481.1 52 46 .
Chr2	stalkie_big_nohaplotig	exon	81104981	81104985	100	-	.	Parent=FBgn0038481.1.mrna2;Target=FBgn0038481.1 45 41 .
Chr2	stalkie_big_nohaplotig	CDS	81095712	81095717	.	-	2	Parent=FBgn0038481.1.mrna2;Target=FBgn0038481.1 129 124 .
Chr2	stalkie_big_nohaplotig	CDS	81095748	81095756	.	-	2	Parent=FBgn0038481.1.mrna2;Target=FBgn0038481.1 70 62 .
Chr2	stalkie_big_nohaplotig	CDS	81099403	81099411	.	-	2	Parent=FBgn0038481.1.mrna2;Target=FBgn0038481.1 61 53 .
Chr2	stalkie_big_nohaplotig	CDS	81101447	81101453	.	-	0	Parent=FBgn0038481.1.mrna2;Target=FBgn0038481.1 52 46 .
Chr2	stalkie_big_nohaplotig	CDS	81104981	81104983	.	-	0	Parent=FBgn0038481.1.mrna2;Target=FBgn0038481.1 45 43 .
Chr2	gffcl	locus	81107918	81129610	.	+	.	ID=RLOC_00018912;geneIDs=FBgn0259146.path1;transcripts=FBgn0259146.mrna1,FBgn0259146.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81107918	81129610	.	+	.	ID=FBgn0259146.mrna1;geneID=FBgn0259146.path1;Name=FBgn0259146;Dir=sensecoverage=100.0;identity=98.8;matches=771;mismatches=9;indels=0;unknowns=0;locus=RLOC_00018912
Chr2	stalkie_big_nohaplotig	exon	81107918	81108280	98	+	.	Parent=FBgn0259146.mrna1;Target=FBgn0259146 1 363 +
Chr2	stalkie_big_nohaplotig	exon	81126160	81126576	99	+	.	Parent=FBgn0259146.mrna1;Target=FBgn0259146 1 24 +
Chr2	stalkie_big_nohaplotig	exon	81127751	81129610	99	+	.	Parent=FBgn0259146.mrna1;Target=FBgn0259146 25 1884 +
Chr2	stalkie_big_nohaplotig	CDS	81107918	81108280	.	+	0	Parent=FBgn0259146.mrna1;Target=FBgn0259146 1 363 +
Chr2	stalkie_big_nohaplotig	CDS	81126160	81126576	.	+	0	Parent=FBgn0259146.mrna1;Target=FBgn0259146 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	81127751	81129610	.	+	0	Parent=FBgn0259146.mrna1;Target=FBgn0259146 25 1884 +
Chr2	stalkie_big_nohaplotig	mRNA	81126547	81129610	.	+	.	ID=FBgn0259146.mrna1;geneID=FBgn0259146.path1;Name=FBgn0259146;Dir=sensecoverage=100.0;identity=99.5;matches=1875;mismatches=9;indels=0;unknowns=0;locus=RLOC_00018912
Chr2	stalkie_big_nohaplotig	exon	81126547	81129610	.	+	.	Parent=FBgn0259146.mrna1
Chr2	gffcl	locus	81131765	81132159	.	-	.	ID=RLOC_00018913;geneIDs=comp150509_c0_seq1.path1;transcripts=comp150509_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81131765	81132159	.	-	.	ID=comp150509_c0_seq1.mrna1;geneID=comp150509_c0_seq1.path1;Name=comp150509_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.4;matches=365;mismatches=15;indels=15;unknowns=0;Target=comp150509_c0_seq1 380 1 .;CDS_Target=comp150509_c0_seq1 379 287 .;locus=RLOC_00018913
Chr2	stalkie_big_nohaplotig	exon	81131765	81132159	92	-	.	Parent=comp150509_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	81131766	81131858	.	-	0	Parent=comp150509_c0_seq1.mrna1
Chr2	gffcl	locus	81132166	81132542	.	-	.	ID=RLOC_00018914;geneIDs=comp159773_c0_seq1.path1;transcripts=comp159773_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81132166	81132542	.	-	.	ID=comp159773_c0_seq1.mrna1;geneID=comp159773_c0_seq1.path1;Name=comp159773_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=329;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018914
Chr2	stalkie_big_nohaplotig	exon	81132166	81132314	100	-	.	Parent=comp159773_c0_seq1.mrna1;Target=comp159773_c0_seq1 345 197 .
Chr2	stalkie_big_nohaplotig	exon	81132363	81132542	100	-	.	Parent=comp159773_c0_seq1.mrna1;Target=comp159773_c0_seq1 180 1 .
Chr2	stalkie_big_nohaplotig	CDS	81132258	81132314	.	-	1	Parent=comp159773_c0_seq1.mrna1;Target=comp159773_c0_seq1 253 197 .
Chr2	stalkie_big_nohaplotig	CDS	81132363	81132418	.	-	0	Parent=comp159773_c0_seq1.mrna1;Target=comp159773_c0_seq1 180 125 .
Chr2	gffcl	locus	81150599	81153234	.	-	.	ID=RLOC_00018916;geneIDs=FBgn0038301.3.path1,comp156659_c1_seq1.path1;transcripts=FBgn0038301.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81151202	81153234	.	-	.	ID=FBgn0038301.3.mrna1;geneID=FBgn0038301.3.path1;Name=FBgn0038301.3;Dir=sensecoverage=100.0;identity=99.8;matches=1853;mismatches=4;indels=0;unknowns=0;locus=RLOC_00018916
Chr2	stalkie_big_nohaplotig	exon	81151202	81151590	99	-	.	Parent=FBgn0038301.3.mrna1;Target=FBgn0038301.3 1469 1857 +
Chr2	stalkie_big_nohaplotig	exon	81151644	81152019	100	-	.	Parent=FBgn0038301.3.mrna1;Target=FBgn0038301.3 1093 1468 +
Chr2	stalkie_big_nohaplotig	exon	81152078	81153004	99	-	.	Parent=FBgn0038301.3.mrna1;Target=FBgn0038301.3 166 1092 +
Chr2	stalkie_big_nohaplotig	exon	81153070	81153234	100	-	.	Parent=FBgn0038301.3.mrna1;Target=FBgn0038301.3 1 165 +
Chr2	stalkie_big_nohaplotig	CDS	81151202	81151590	.	-	2	Parent=FBgn0038301.3.mrna1;Target=FBgn0038301.3 1469 1857 +
Chr2	stalkie_big_nohaplotig	CDS	81151644	81152019	.	-	0	Parent=FBgn0038301.3.mrna1;Target=FBgn0038301.3 1093 1468 +
Chr2	stalkie_big_nohaplotig	CDS	81152078	81153004	.	-	0	Parent=FBgn0038301.3.mrna1;Target=FBgn0038301.3 166 1092 +
Chr2	stalkie_big_nohaplotig	CDS	81153070	81153234	.	-	0	Parent=FBgn0038301.3.mrna1;Target=FBgn0038301.3 1 165 +
Chr2	gffcl	locus	81155028	81156730	.	+	.	ID=RLOC_00018917;geneIDs=FBgn0037584.1.path1;transcripts=FBgn0037584.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81155028	81156730	.	+	.	ID=FBgn0037584.1.mrna1;geneID=FBgn0037584.1.path1;Name=FBgn0037584.1;Dir=sensecoverage=100.0;identity=99.7;matches=1588;mismatches=5;indels=0;unknowns=0;locus=RLOC_00018917
Chr2	stalkie_big_nohaplotig	exon	81155028	81155222	98	+	.	Parent=FBgn0037584.1.mrna1;Target=FBgn0037584.1 1 195 +
Chr2	stalkie_big_nohaplotig	exon	81155278	81156182	99	+	.	Parent=FBgn0037584.1.mrna1;Target=FBgn0037584.1 196 1100 +
Chr2	stalkie_big_nohaplotig	exon	81156238	81156730	99	+	.	Parent=FBgn0037584.1.mrna1;Target=FBgn0037584.1 1101 1593 +
Chr2	stalkie_big_nohaplotig	CDS	81155028	81155222	.	+	0	Parent=FBgn0037584.1.mrna1;Target=FBgn0037584.1 1 195 +
Chr2	stalkie_big_nohaplotig	CDS	81155278	81156182	.	+	0	Parent=FBgn0037584.1.mrna1;Target=FBgn0037584.1 196 1100 +
Chr2	stalkie_big_nohaplotig	CDS	81156238	81156730	.	+	1	Parent=FBgn0037584.1.mrna1;Target=FBgn0037584.1 1101 1593 +
Chr2	gffcl	locus	81166066	81166383	.	+	.	ID=RLOC_00018920;geneIDs=comp153175_c0_seq1.path1;transcripts=comp153175_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81166066	81166383	.	+	.	ID=comp153175_c0_seq1.mrna1;geneID=comp153175_c0_seq1.path1;Name=comp153175_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.1;matches=315;mismatches=3;indels=0;unknowns=0;Target=comp153175_c0_seq1 318 1 .;CDS_Target=comp153175_c0_seq1 73 2 .;locus=RLOC_00018920
Chr2	stalkie_big_nohaplotig	exon	81166066	81166383	99	+	.	Parent=comp153175_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	81166067	81166138	.	+	0	Parent=comp153175_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81446145	81446536	.	+	.	ID=comp136424_c1_seq1.mrna2;geneID=comp136424_c1_seq1.path2;Name=comp136424_c1_seq1;Dir=indeterminatecoverage=99.7;identity=99.2;matches=390;mismatches=1;indels=2;unknowns=0;Target=comp136424_c1_seq1 393 2 .;CDS_Target=comp136424_c1_seq1 98 3 .;locus=RLOC_00018922
Chr2	stalkie_big_nohaplotig	exon	81446145	81446536	99	+	.	Parent=comp136424_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	81446146	81446240	.	+	0	Parent=comp136424_c1_seq1.mrna2
Chr2	gffcl	locus	81464131	81464931	.	+	.	ID=RLOC_00018924;geneIDs=comp144168_c0_seq1.path1;transcripts=comp144168_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81464131	81464931	.	+	.	ID=comp144168_c0_seq1.mrna1;geneID=comp144168_c0_seq1.path1;Name=comp144168_c0_seq1;Dir=antisensecoverage=97.7;identity=99.3;matches=592;mismatches=3;indels=1;unknowns=0;Target=comp144168_c0_seq1 190 408 .;locus=RLOC_00018924
Chr2	stalkie_big_nohaplotig	exon	81464131	81464226	96	+	.	Parent=comp144168_c0_seq1.mrna1;Target=comp144168_c0_seq1 515 609 -
Chr2	stalkie_big_nohaplotig	exon	81464432	81464931	99	+	.	Parent=comp144168_c0_seq1.mrna1;Target=comp144168_c0_seq1 15 514 -
Chr2	stalkie_big_nohaplotig	CDS	81464538	81464756	.	+	0	Parent=comp144168_c0_seq1.mrna1
Chr2	gffcl	locus	81521481	81522432	.	+	.	ID=RLOC_00018925;geneIDs=comp156198_c0_seq1.path1;transcripts=comp156198_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81521481	81522432	.	+	.	ID=comp156198_c0_seq1.mrna1;geneID=comp156198_c0_seq1.path1;Name=comp156198_c0_seq1;Dir=indeterminatecoverage=99.9;identity=93.8;matches=893;mismatches=49;indels=10;unknowns=0;Target=comp156198_c0_seq1 942 1 .;CDS_Target=comp156198_c0_seq1 776 531 .;locus=RLOC_00018925
Chr2	stalkie_big_nohaplotig	exon	81521481	81522432	93	+	.	Parent=comp156198_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	81522021	81522266	.	+	0	Parent=comp156198_c0_seq1.mrna1
Chr2	gffcl	locus	81541274	81541473	.	-	.	ID=RLOC_00018927;geneIDs=comp202023_c0_seq1.path1;transcripts=comp202023_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81541274	81541473	.	-	.	ID=comp202023_c0_seq1.mrna1;geneID=comp202023_c0_seq1.path1;Name=comp202023_c0_seq1;Dir=indeterminatecoverage=93.0;identity=100.0;matches=200;mismatches=0;indels=0;unknowns=0;Target=comp202023_c0_seq1 200 1 .;CDS_Target=comp202023_c0_seq1 193 110 .;locus=RLOC_00018927
Chr2	stalkie_big_nohaplotig	exon	81541274	81541473	100	-	.	Parent=comp202023_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	81541281	81541364	.	-	0	Parent=comp202023_c0_seq1.mrna1
Chr2	gffcl	locus	81542142	81549496	.	-	.	ID=RLOC_00018928;geneIDs=FBgn0250753.1.path1,comp135570_c0_seq1.path1;transcripts=FBgn0250753.1.mrna1,comp135570_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81542142	81547441	.	-	.	ID=FBgn0250753.1.mrna1;geneID=FBgn0250753.1.path1;Name=FBgn0250753.1;Dir=sensecoverage=100.0;identity=100.0;matches=1296;mismatches=0;indels=0;unknowns=0;locus=RLOC_00018928
Chr2	stalkie_big_nohaplotig	exon	81542142	81542194	100	-	.	Parent=FBgn0250753.1.mrna1;Target=FBgn0250753.1 1244 1296 +
Chr2	stalkie_big_nohaplotig	exon	81542702	81542824	100	-	.	Parent=FBgn0250753.1.mrna1;Target=FBgn0250753.1 1121 1243 +
Chr2	stalkie_big_nohaplotig	exon	81542891	81543110	100	-	.	Parent=FBgn0250753.1.mrna1;Target=FBgn0250753.1 901 1120 +
Chr2	stalkie_big_nohaplotig	exon	81544132	81544375	100	-	.	Parent=FBgn0250753.1.mrna1;Target=FBgn0250753.1 657 900 +
Chr2	stalkie_big_nohaplotig	exon	81545860	81546025	100	-	.	Parent=FBgn0250753.1.mrna1;Target=FBgn0250753.1 491 656 +
Chr2	stalkie_big_nohaplotig	exon	81546465	81546603	100	-	.	Parent=FBgn0250753.1.mrna1;Target=FBgn0250753.1 352 490 +
Chr2	stalkie_big_nohaplotig	exon	81546940	81547040	100	-	.	Parent=FBgn0250753.1.mrna1;Target=FBgn0250753.1 251 351 +
Chr2	stalkie_big_nohaplotig	exon	81547115	81547291	100	-	.	Parent=FBgn0250753.1.mrna1;Target=FBgn0250753.1 74 250 +
Chr2	stalkie_big_nohaplotig	exon	81547369	81547441	100	-	.	Parent=FBgn0250753.1.mrna1;Target=FBgn0250753.1 1 73 +
Chr2	stalkie_big_nohaplotig	CDS	81542142	81542194	.	-	2	Parent=FBgn0250753.1.mrna1;Target=FBgn0250753.1 1244 1296 +
Chr2	stalkie_big_nohaplotig	CDS	81542702	81542824	.	-	2	Parent=FBgn0250753.1.mrna1;Target=FBgn0250753.1 1121 1243 +
Chr2	stalkie_big_nohaplotig	CDS	81542891	81543110	.	-	0	Parent=FBgn0250753.1.mrna1;Target=FBgn0250753.1 901 1120 +
Chr2	stalkie_big_nohaplotig	CDS	81544132	81544375	.	-	1	Parent=FBgn0250753.1.mrna1;Target=FBgn0250753.1 657 900 +
Chr2	stalkie_big_nohaplotig	CDS	81545860	81546025	.	-	2	Parent=FBgn0250753.1.mrna1;Target=FBgn0250753.1 491 656 +
Chr2	stalkie_big_nohaplotig	CDS	81546465	81546603	.	-	0	Parent=FBgn0250753.1.mrna1;Target=FBgn0250753.1 352 490 +
Chr2	stalkie_big_nohaplotig	CDS	81546940	81547040	.	-	2	Parent=FBgn0250753.1.mrna1;Target=FBgn0250753.1 251 351 +
Chr2	stalkie_big_nohaplotig	CDS	81547115	81547291	.	-	2	Parent=FBgn0250753.1.mrna1;Target=FBgn0250753.1 74 250 +
Chr2	stalkie_big_nohaplotig	CDS	81547369	81547441	.	-	0	Parent=FBgn0250753.1.mrna1;Target=FBgn0250753.1 1 73 +
Chr2	stalkie_big_nohaplotig	mRNA	81547419	81549496	.	-	.	ID=comp135570_c0_seq1.mrna1;geneID=comp135570_c0_seq1.path1;Name=comp135570_c0_seq1;Dir=antisensecoverage=100.0;identity=95.9;matches=211;mismatches=1;indels=8;unknowns=0;Target=comp135570_c0_seq1 188 220 .;locus=RLOC_00018928
Chr2	stalkie_big_nohaplotig	exon	81547419	81547440	100	-	.	Parent=comp135570_c0_seq1.mrna1;Target=comp135570_c0_seq1 1 22 -
Chr2	stalkie_big_nohaplotig	exon	81549307	81549496	95	-	.	Parent=comp135570_c0_seq1.mrna1;Target=comp135570_c0_seq1 23 220 -
Chr2	stalkie_big_nohaplotig	CDS	81549464	81549496	.	-	0	Parent=comp135570_c0_seq1.mrna1
Chr2	gffcl	locus	81555101	81555708	.	+	.	ID=RLOC_00018929;geneIDs=FBgn0051450.1.path1;transcripts=FBgn0051450.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81555101	81555708	.	+	.	ID=FBgn0051450.1.mrna1;geneID=FBgn0051450.1.path1;Name=FBgn0051450.1;Dir=sensecoverage=100.0;identity=98.7;matches=465;mismatches=6;indels=0;unknowns=0;locus=RLOC_00018929
Chr2	stalkie_big_nohaplotig	exon	81555101	81555203	100	+	.	Parent=FBgn0051450.1.mrna1;Target=FBgn0051450.1 1 103 +
Chr2	stalkie_big_nohaplotig	exon	81555283	81555486	98	+	.	Parent=FBgn0051450.1.mrna1;Target=FBgn0051450.1 104 307 +
Chr2	stalkie_big_nohaplotig	exon	81555545	81555708	98	+	.	Parent=FBgn0051450.1.mrna1;Target=FBgn0051450.1 308 471 +
Chr2	stalkie_big_nohaplotig	CDS	81555101	81555203	.	+	0	Parent=FBgn0051450.1.mrna1;Target=FBgn0051450.1 1 103 +
Chr2	stalkie_big_nohaplotig	CDS	81555283	81555486	.	+	2	Parent=FBgn0051450.1.mrna1;Target=FBgn0051450.1 104 307 +
Chr2	stalkie_big_nohaplotig	CDS	81555545	81555708	.	+	2	Parent=FBgn0051450.1.mrna1;Target=FBgn0051450.1 308 471 +
Chr2	gffcl	locus	81557161	81558576	.	+	.	ID=RLOC_00018930;geneIDs=FBgn0051453.1.path1;transcripts=FBgn0051453.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81557161	81558576	.	+	.	ID=FBgn0051453.1.mrna1;geneID=FBgn0051453.1.path1;Name=FBgn0051453.1;Dir=sensecoverage=100.0;identity=99.6;matches=1249;mismatches=5;indels=0;unknowns=0;locus=RLOC_00018930
Chr2	stalkie_big_nohaplotig	exon	81557161	81557237	100	+	.	Parent=FBgn0051453.1.mrna1;Target=FBgn0051453.1 1 77 +
Chr2	stalkie_big_nohaplotig	exon	81557287	81557449	100	+	.	Parent=FBgn0051453.1.mrna1;Target=FBgn0051453.1 78 240 +
Chr2	stalkie_big_nohaplotig	exon	81557507	81557707	99	+	.	Parent=FBgn0051453.1.mrna1;Target=FBgn0051453.1 241 441 +
Chr2	stalkie_big_nohaplotig	exon	81557764	81558576	99	+	.	Parent=FBgn0051453.1.mrna1;Target=FBgn0051453.1 442 1254 +
Chr2	stalkie_big_nohaplotig	CDS	81557161	81557237	.	+	0	Parent=FBgn0051453.1.mrna1;Target=FBgn0051453.1 1 77 +
Chr2	stalkie_big_nohaplotig	CDS	81557287	81557449	.	+	1	Parent=FBgn0051453.1.mrna1;Target=FBgn0051453.1 78 240 +
Chr2	stalkie_big_nohaplotig	CDS	81557507	81557707	.	+	0	Parent=FBgn0051453.1.mrna1;Target=FBgn0051453.1 241 441 +
Chr2	stalkie_big_nohaplotig	CDS	81557764	81558576	.	+	0	Parent=FBgn0051453.1.mrna1;Target=FBgn0051453.1 442 1254 +
Chr2	gffcl	locus	81616316	81616609	.	+	.	ID=RLOC_00018931;geneIDs=comp150148_c0_seq1.path1;transcripts=comp150148_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81616316	81616609	.	+	.	ID=comp150148_c0_seq1.mrna1;geneID=comp150148_c0_seq1.path1;Name=comp150148_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.6;matches=278;mismatches=14;indels=2;unknowns=0;Target=comp150148_c0_seq1 292 1 .;CDS_Target=comp150148_c0_seq1 79 2 .;locus=RLOC_00018931
Chr2	stalkie_big_nohaplotig	exon	81616316	81616609	94	+	.	Parent=comp150148_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	81616317	81616394	.	+	0	Parent=comp150148_c0_seq1.mrna1
Chr2	gffcl	locus	81636674	81637355	.	-	.	ID=RLOC_00018932;geneIDs=comp148744_c0_seq1.path1;transcripts=comp148744_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81636674	81637355	.	-	.	ID=comp148744_c0_seq1.mrna1;geneID=comp148744_c0_seq1.path1;Name=comp148744_c0_seq1;Dir=indeterminatecoverage=98.1;identity=99.0;matches=677;mismatches=5;indels=2;unknowns=0;Target=comp148744_c0_seq1 697 14 .;CDS_Target=comp148744_c0_seq1 640 560 .;locus=RLOC_00018932
Chr2	stalkie_big_nohaplotig	exon	81636674	81637355	98	-	.	Parent=comp148744_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	81636731	81636811	.	-	0	Parent=comp148744_c0_seq1.mrna1
Chr2	gffcl	locus	81638257	81639048	.	-	.	ID=RLOC_00018933;geneIDs=comp142736_c0_seq1.path2;transcripts=comp142736_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	81638257	81639048	.	-	.	ID=comp142736_c0_seq1.mrna2;geneID=comp142736_c0_seq1.path2;Name=comp142736_c0_seq1;Dir=indeterminatecoverage=92.7;identity=97.9;matches=775;mismatches=12;indels=5;unknowns=0;Target=comp142736_c0_seq1 849 63 .;CDS_Target=comp142736_c0_seq1 268 71 .;locus=RLOC_00018933
Chr2	stalkie_big_nohaplotig	exon	81638257	81639048	97	-	.	Parent=comp142736_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	81638839	81639040	.	-	0	Parent=comp142736_c0_seq1.mrna2
Chr2	gffcl	locus	81639788	81646588	.	-	.	ID=RLOC_00018934;geneIDs=FBgn0261986.1.path1;transcripts=FBgn0261986.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81639788	81646588	.	-	.	ID=FBgn0261986.1.mrna1;geneID=FBgn0261986.1.path1;Name=FBgn0261986.1;Dir=sensecoverage=99.7;identity=99.7;matches=1810;mismatches=5;indels=0;unknowns=0;locus=RLOC_00018934
Chr2	stalkie_big_nohaplotig	exon	81639788	81639885	100	-	.	Parent=FBgn0261986.1.mrna1;Target=FBgn0261986.1 1724 1821 +
Chr2	stalkie_big_nohaplotig	exon	81641418	81641505	100	-	.	Parent=FBgn0261986.1.mrna1;Target=FBgn0261986.1 1636 1723 +
Chr2	stalkie_big_nohaplotig	exon	81641570	81641726	100	-	.	Parent=FBgn0261986.1.mrna1;Target=FBgn0261986.1 1479 1635 +
Chr2	stalkie_big_nohaplotig	exon	81641796	81641998	100	-	.	Parent=FBgn0261986.1.mrna1;Target=FBgn0261986.1 1276 1478 +
Chr2	stalkie_big_nohaplotig	exon	81645192	81645308	100	-	.	Parent=FBgn0261986.1.mrna1;Target=FBgn0261986.1 1159 1275 +
Chr2	stalkie_big_nohaplotig	exon	81645381	81646275	99	-	.	Parent=FBgn0261986.1.mrna1;Target=FBgn0261986.1 264 1158 +
Chr2	stalkie_big_nohaplotig	exon	81646332	81646588	99	-	.	Parent=FBgn0261986.1.mrna1;Target=FBgn0261986.1 7 263 +
Chr2	stalkie_big_nohaplotig	CDS	81639788	81639885	.	-	2	Parent=FBgn0261986.1.mrna1;Target=FBgn0261986.1 1724 1821 +
Chr2	stalkie_big_nohaplotig	CDS	81641418	81641505	.	-	0	Parent=FBgn0261986.1.mrna1;Target=FBgn0261986.1 1636 1723 +
Chr2	stalkie_big_nohaplotig	CDS	81641570	81641726	.	-	1	Parent=FBgn0261986.1.mrna1;Target=FBgn0261986.1 1479 1635 +
Chr2	stalkie_big_nohaplotig	CDS	81641796	81641998	.	-	0	Parent=FBgn0261986.1.mrna1;Target=FBgn0261986.1 1276 1478 +
Chr2	stalkie_big_nohaplotig	CDS	81645192	81645308	.	-	0	Parent=FBgn0261986.1.mrna1;Target=FBgn0261986.1 1159 1275 +
Chr2	stalkie_big_nohaplotig	CDS	81645381	81646275	.	-	1	Parent=FBgn0261986.1.mrna1;Target=FBgn0261986.1 264 1158 +
Chr2	stalkie_big_nohaplotig	CDS	81646332	81646588	.	-	0	Parent=FBgn0261986.1.mrna1;Target=FBgn0261986.1 7 263 +
Chr2	gffcl	locus	81642135	81642942	.	+	.	ID=RLOC_00018935;geneIDs=comp156057_c0_seq1.path1;transcripts=comp156057_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81642135	81642942	.	+	.	ID=comp156057_c0_seq1.mrna1;geneID=comp156057_c0_seq1.path1;Name=comp156057_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.3;matches=804;mismatches=4;indels=10;unknowns=0;Target=comp156057_c0_seq1 818 1 .;CDS_Target=comp156057_c0_seq1 185 123 .;locus=RLOC_00018935
Chr2	stalkie_big_nohaplotig	exon	81642135	81642942	98	+	.	Parent=comp156057_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	81642257	81642319	.	+	0	Parent=comp156057_c0_seq1.mrna1
Chr2	gffcl	locus	81650369	81664799	.	+	.	ID=RLOC_00018937;geneIDs=FBgn0027508.1.path1;transcripts=FBgn0027508.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81650369	81664799	.	+	.	ID=FBgn0027508.1.mrna1;geneID=FBgn0027508.1.path1;Name=FBgn0027508.1;Dir=sensecoverage=100.0;identity=99.8;matches=3594;mismatches=6;indels=0;unknowns=0;locus=RLOC_00018937
Chr2	stalkie_big_nohaplotig	exon	81650369	81650630	100	+	.	Parent=FBgn0027508.1.mrna1;Target=FBgn0027508.1 1 262 +
Chr2	stalkie_big_nohaplotig	exon	81660907	81661689	100	+	.	Parent=FBgn0027508.1.mrna1;Target=FBgn0027508.1 263 1045 +
Chr2	stalkie_big_nohaplotig	exon	81661761	81661921	100	+	.	Parent=FBgn0027508.1.mrna1;Target=FBgn0027508.1 1046 1206 +
Chr2	stalkie_big_nohaplotig	exon	81662112	81663822	99	+	.	Parent=FBgn0027508.1.mrna1;Target=FBgn0027508.1 1207 2917 +
Chr2	stalkie_big_nohaplotig	exon	81663887	81664044	99	+	.	Parent=FBgn0027508.1.mrna1;Target=FBgn0027508.1 2918 3075 +
Chr2	stalkie_big_nohaplotig	exon	81664101	81664393	100	+	.	Parent=FBgn0027508.1.mrna1;Target=FBgn0027508.1 3076 3368 +
Chr2	stalkie_big_nohaplotig	exon	81664451	81664607	99	+	.	Parent=FBgn0027508.1.mrna1;Target=FBgn0027508.1 3369 3525 +
Chr2	stalkie_big_nohaplotig	exon	81664725	81664799	100	+	.	Parent=FBgn0027508.1.mrna1;Target=FBgn0027508.1 3526 3600 +
Chr2	stalkie_big_nohaplotig	CDS	81650369	81650630	.	+	0	Parent=FBgn0027508.1.mrna1;Target=FBgn0027508.1 1 262 +
Chr2	stalkie_big_nohaplotig	CDS	81660907	81661689	.	+	2	Parent=FBgn0027508.1.mrna1;Target=FBgn0027508.1 263 1045 +
Chr2	stalkie_big_nohaplotig	CDS	81661761	81661921	.	+	2	Parent=FBgn0027508.1.mrna1;Target=FBgn0027508.1 1046 1206 +
Chr2	stalkie_big_nohaplotig	CDS	81662112	81663822	.	+	0	Parent=FBgn0027508.1.mrna1;Target=FBgn0027508.1 1207 2917 +
Chr2	stalkie_big_nohaplotig	CDS	81663887	81664044	.	+	2	Parent=FBgn0027508.1.mrna1;Target=FBgn0027508.1 2918 3075 +
Chr2	stalkie_big_nohaplotig	CDS	81664101	81664393	.	+	0	Parent=FBgn0027508.1.mrna1;Target=FBgn0027508.1 3076 3368 +
Chr2	stalkie_big_nohaplotig	CDS	81664451	81664607	.	+	1	Parent=FBgn0027508.1.mrna1;Target=FBgn0027508.1 3369 3525 +
Chr2	stalkie_big_nohaplotig	CDS	81664725	81664799	.	+	0	Parent=FBgn0027508.1.mrna1;Target=FBgn0027508.1 3526 3600 +
Chr2	gffcl	locus	81665264	81665750	.	+	.	ID=RLOC_00018938;geneIDs=FBgn0036134.1.path2;transcripts=FBgn0036134.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	81665264	81665750	.	+	.	ID=FBgn0036134.1.mrna2;geneID=FBgn0036134.1.path2;Name=FBgn0036134.1;Dir=indeterminatecoverage=19.3;identity=100.0;matches=487;mismatches=0;indels=0;unknowns=0;Target=FBgn0036134.1 2523 2037 .;locus=RLOC_00018938
Chr2	stalkie_big_nohaplotig	exon	81665264	81665750	100	+	.	Parent=FBgn0036134.1.mrna2
Chr2	gffcl	locus	81688818	81690346	.	+	.	ID=RLOC_00018939;geneIDs=comp151170_c1_seq1.path4;transcripts=comp151170_c1_seq1.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	81688818	81690346	.	+	.	ID=comp151170_c1_seq1.mrna4;geneID=comp151170_c1_seq1.path4;Name=comp151170_c1_seq1;Dir=indeterminatecoverage=76.5;identity=89.9;matches=1331;mismatches=97;indels=53;unknowns=0;Target=comp151170_c1_seq1 551 441 .;locus=RLOC_00018939
Chr2	stalkie_big_nohaplotig	exon	81688818	81689553	96	+	.	Parent=comp151170_c1_seq1.mrna4;Target=comp151170_c1_seq1 1175 439 .
Chr2	stalkie_big_nohaplotig	exon	81689605	81690346	83	+	.	Parent=comp151170_c1_seq1.mrna4;Target=comp151170_c1_seq1 1869 1176 .
Chr2	stalkie_big_nohaplotig	CDS	81688820	81688930	.	+	0	Parent=comp151170_c1_seq1.mrna4
Chr2	gffcl	locus	81694649	81697115	.	-	.	ID=RLOC_00018940;geneIDs=Dv_FBgn0198238.1.path1;transcripts=Dv_FBgn0198238.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81694649	81697115	.	-	.	ID=Dv_FBgn0198238.1.mrna1;geneID=Dv_FBgn0198238.1.path1;Name=Dv_FBgn0198238.1;Dir=sensecoverage=100.0;identity=99.8;matches=1078;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018940
Chr2	stalkie_big_nohaplotig	exon	81694649	81695096	100	-	.	Parent=Dv_FBgn0198238.1.mrna1;Target=Dv_FBgn0198238.1 633 1080 +
Chr2	stalkie_big_nohaplotig	exon	81695172	81695243	100	-	.	Parent=Dv_FBgn0198238.1.mrna1;Target=Dv_FBgn0198238.1 561 632 +
Chr2	stalkie_big_nohaplotig	exon	81695310	81695661	100	-	.	Parent=Dv_FBgn0198238.1.mrna1;Target=Dv_FBgn0198238.1 209 560 +
Chr2	stalkie_big_nohaplotig	exon	81696908	81697115	99	-	.	Parent=Dv_FBgn0198238.1.mrna1;Target=Dv_FBgn0198238.1 1 208 +
Chr2	stalkie_big_nohaplotig	CDS	81694649	81695096	.	-	1	Parent=Dv_FBgn0198238.1.mrna1;Target=Dv_FBgn0198238.1 633 1080 +
Chr2	stalkie_big_nohaplotig	CDS	81695172	81695243	.	-	1	Parent=Dv_FBgn0198238.1.mrna1;Target=Dv_FBgn0198238.1 561 632 +
Chr2	stalkie_big_nohaplotig	CDS	81695310	81695661	.	-	2	Parent=Dv_FBgn0198238.1.mrna1;Target=Dv_FBgn0198238.1 209 560 +
Chr2	stalkie_big_nohaplotig	CDS	81696908	81697115	.	-	0	Parent=Dv_FBgn0198238.1.mrna1;Target=Dv_FBgn0198238.1 1 208 +
Chr2	gffcl	locus	81707429	81728626	.	-	.	ID=RLOC_00018941;geneIDs=comp157264_c0_seq1.path1;transcripts=comp157264_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81707429	81728626	.	-	.	ID=comp157264_c0_seq1.mrna1;geneID=comp157264_c0_seq1.path1;Name=comp157264_c0_seq1;Dir=antisensecoverage=96.7;identity=97.7;matches=1462;mismatches=13;indels=21;unknowns=0;Target=comp157264_c0_seq1 1052 1210 .;locus=RLOC_00018941
Chr2	stalkie_big_nohaplotig	exon	81707429	81708365	96	-	.	Parent=comp157264_c0_seq1.mrna1;Target=comp157264_c0_seq1 23 972 -
Chr2	stalkie_big_nohaplotig	exon	81728086	81728626	99	-	.	Parent=comp157264_c0_seq1.mrna1;Target=comp157264_c0_seq1 973 1515 -
Chr2	stalkie_big_nohaplotig	CDS	81728165	81728322	.	-	0	Parent=comp157264_c0_seq1.mrna1
Chr2	gffcl	locus	81728663	81728757	.	-	.	ID=RLOC_00018942;geneIDs=comp116902_c0_seq1.path1;transcripts=comp116902_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81728663	81728757	.	-	.	ID=comp116902_c0_seq1.mrna1;geneID=comp116902_c0_seq1.path1;Name=comp116902_c0_seq1;Dir=indeterminatecoverage=13.3;identity=97.9;matches=95;mismatches=0;indels=2;unknowns=0;Target=comp116902_c0_seq1 97 1 .;locus=RLOC_00018942
Chr2	stalkie_big_nohaplotig	exon	81728663	81728757	97	-	.	Parent=comp116902_c0_seq1.mrna1
Chr2	gffcl	locus	81766097	81775539	.	-	.	ID=RLOC_00018943;geneIDs=FBgn0038003.3.path1;transcripts=FBgn0038003.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81766097	81775539	.	-	.	ID=FBgn0038003.3.mrna1;geneID=FBgn0038003.3.path1;Name=FBgn0038003.3;Dir=sensecoverage=100.0;identity=99.9;matches=797;mismatches=1;indels=0;unknowns=0;locus=RLOC_00018943
Chr2	stalkie_big_nohaplotig	exon	81766097	81766267	100	-	.	Parent=FBgn0038003.3.mrna1;Target=FBgn0038003.3 628 798 +
Chr2	stalkie_big_nohaplotig	exon	81766345	81766918	99	-	.	Parent=FBgn0038003.3.mrna1;Target=FBgn0038003.3 54 627 +
Chr2	stalkie_big_nohaplotig	exon	81775487	81775539	100	-	.	Parent=FBgn0038003.3.mrna1;Target=FBgn0038003.3 1 53 +
Chr2	stalkie_big_nohaplotig	CDS	81766097	81766267	.	-	0	Parent=FBgn0038003.3.mrna1;Target=FBgn0038003.3 628 798 +
Chr2	stalkie_big_nohaplotig	CDS	81766345	81766918	.	-	1	Parent=FBgn0038003.3.mrna1;Target=FBgn0038003.3 54 627 +
Chr2	stalkie_big_nohaplotig	CDS	81775487	81775539	.	-	0	Parent=FBgn0038003.3.mrna1;Target=FBgn0038003.3 1 53 +
Chr2	gffcl	locus	81791024	81795473	.	+	.	ID=RLOC_00018945;geneIDs=FBgn0037998.1.path1;transcripts=FBgn0037998.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81791024	81795473	.	+	.	ID=FBgn0037998.1.mrna1;geneID=FBgn0037998.1.path1;Name=FBgn0037998.1;Dir=sensecoverage=100.0;identity=99.6;matches=2795;mismatches=11;indels=0;unknowns=2;locus=RLOC_00018945
Chr2	stalkie_big_nohaplotig	exon	81791024	81791319	99	+	.	Parent=FBgn0037998.1.mrna1;Target=FBgn0037998.1 1 296 +
Chr2	stalkie_big_nohaplotig	exon	81791390	81792069	99	+	.	Parent=FBgn0037998.1.mrna1;Target=FBgn0037998.1 297 976 +
Chr2	stalkie_big_nohaplotig	exon	81792132	81793198	99	+	.	Parent=FBgn0037998.1.mrna1;Target=FBgn0037998.1 977 2043 +
Chr2	stalkie_big_nohaplotig	exon	81793271	81793924	99	+	.	Parent=FBgn0037998.1.mrna1;Target=FBgn0037998.1 2044 2697 +
Chr2	stalkie_big_nohaplotig	exon	81795363	81795473	100	+	.	Parent=FBgn0037998.1.mrna1;Target=FBgn0037998.1 2698 2808 +
Chr2	stalkie_big_nohaplotig	CDS	81791024	81791319	.	+	0	Parent=FBgn0037998.1.mrna1;Target=FBgn0037998.1 1 296 +
Chr2	stalkie_big_nohaplotig	CDS	81791390	81792069	.	+	1	Parent=FBgn0037998.1.mrna1;Target=FBgn0037998.1 297 976 +
Chr2	stalkie_big_nohaplotig	CDS	81792132	81793198	.	+	2	Parent=FBgn0037998.1.mrna1;Target=FBgn0037998.1 977 2043 +
Chr2	stalkie_big_nohaplotig	CDS	81793271	81793924	.	+	0	Parent=FBgn0037998.1.mrna1;Target=FBgn0037998.1 2044 2697 +
Chr2	stalkie_big_nohaplotig	CDS	81795363	81795473	.	+	0	Parent=FBgn0037998.1.mrna1;Target=FBgn0037998.1 2698 2808 +
Chr2	gffcl	locus	81797763	81798366	.	+	.	ID=RLOC_00018946;geneIDs=comp157787_c0_seq1.path1;transcripts=comp157787_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81797763	81798366	.	+	.	ID=comp157787_c0_seq1.mrna1;geneID=comp157787_c0_seq1.path1;Name=comp157787_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=599;mismatches=5;indels=0;unknowns=0;Target=comp157787_c0_seq1 604 1 .;CDS_Target=comp157787_c0_seq1 134 42 .;locus=RLOC_00018946
Chr2	stalkie_big_nohaplotig	exon	81797763	81798366	99	+	.	Parent=comp157787_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	81797804	81797896	.	+	0	Parent=comp157787_c0_seq1.mrna1
Chr2	gffcl	locus	81799427	81800430	.	-	.	ID=RLOC_00018947;geneIDs=comp158610_c1_seq1.path1;transcripts=comp158610_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81799427	81800430	.	-	.	ID=comp158610_c1_seq1.mrna1;geneID=comp158610_c1_seq1.path1;Name=comp158610_c1_seq1;Dir=indeterminatecoverage=100.0;identity=96.6;matches=986;mismatches=18;indels=17;unknowns=0;Target=comp158610_c1_seq1 1021 1 .;CDS_Target=comp158610_c1_seq1 709 551 .;locus=RLOC_00018947
Chr2	stalkie_big_nohaplotig	exon	81799427	81800430	96	-	.	Parent=comp158610_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	81799729	81799887	.	-	0	Parent=comp158610_c1_seq1.mrna1
Chr2	gffcl	locus	81804878	81806723	.	+	.	ID=RLOC_00018948;geneIDs=ORF2635.path1;transcripts=ORF2635.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81804878	81806723	.	+	.	ID=ORF2635.mrna1;geneID=ORF2635.path1;Name=ORF2635;Dir=sensecoverage=100.0;identity=99.6;matches=828;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018948
Chr2	stalkie_big_nohaplotig	exon	81804878	81805382	99	+	.	Parent=ORF2635.mrna1;Target=ORF2635 1 505 +
Chr2	stalkie_big_nohaplotig	exon	81806337	81806382	100	+	.	Parent=ORF2635.mrna1;Target=ORF2635 506 551 +
Chr2	stalkie_big_nohaplotig	exon	81806444	81806723	100	+	.	Parent=ORF2635.mrna1;Target=ORF2635 552 831 +
Chr2	stalkie_big_nohaplotig	CDS	81804878	81805382	.	+	0	Parent=ORF2635.mrna1;Target=ORF2635 1 505 +
Chr2	stalkie_big_nohaplotig	CDS	81806337	81806382	.	+	2	Parent=ORF2635.mrna1;Target=ORF2635 506 551 +
Chr2	stalkie_big_nohaplotig	CDS	81806444	81806723	.	+	1	Parent=ORF2635.mrna1;Target=ORF2635 552 831 +
Chr2	gffcl	locus	81810389	81812947	.	-	.	ID=RLOC_00018949;geneIDs=comp155615_c1_seq1.path1;transcripts=comp155615_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81810389	81812947	.	-	.	ID=comp155615_c1_seq1.mrna1;geneID=comp155615_c1_seq1.path1;Name=comp155615_c1_seq1;Dir=indeterminatecoverage=99.9;identity=99.8;matches=872;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018949
Chr2	stalkie_big_nohaplotig	exon	81810389	81810925	99	-	.	Parent=comp155615_c1_seq1.mrna1;Target=comp155615_c1_seq1 874 338 .
Chr2	stalkie_big_nohaplotig	exon	81812160	81812283	100	-	.	Parent=comp155615_c1_seq1.mrna1;Target=comp155615_c1_seq1 337 214 .
Chr2	stalkie_big_nohaplotig	exon	81812735	81812947	99	-	.	Parent=comp155615_c1_seq1.mrna1;Target=comp155615_c1_seq1 213 1 .
Chr2	stalkie_big_nohaplotig	CDS	81812282	81812283	.	-	2	Parent=comp155615_c1_seq1.mrna1;Target=comp155615_c1_seq1 215 214 .
Chr2	stalkie_big_nohaplotig	CDS	81812735	81812912	.	-	0	Parent=comp155615_c1_seq1.mrna1;Target=comp155615_c1_seq1 213 36 .
Chr2	gffcl	locus	81817895	81834530	.	+	.	ID=RLOC_00018950;geneIDs=FBgn0039355.3.path1,comp163470_c1_seq1.path1;transcripts=comp163470_c1_seq1.mrna1,FBgn0039355.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81817895	81829469	.	+	.	ID=comp163470_c1_seq1.mrna1;geneID=comp163470_c1_seq1.path1;Name=comp163470_c1_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=3244;mismatches=19;indels=1;unknowns=0;locus=RLOC_00018950
Chr2	stalkie_big_nohaplotig	exon	81817895	81818556	98	+	.	Parent=comp163470_c1_seq1.mrna1;Target=comp163470_c1_seq1 2603 3264 -
Chr2	stalkie_big_nohaplotig	exon	81820707	81821089	99	+	.	Parent=comp163470_c1_seq1.mrna1;Target=comp163470_c1_seq1 2220 2602 -
Chr2	stalkie_big_nohaplotig	exon	81824738	81825531	99	+	.	Parent=comp163470_c1_seq1.mrna1;Target=comp163470_c1_seq1 1426 2219 -
Chr2	stalkie_big_nohaplotig	exon	81827989	81828766	99	+	.	Parent=comp163470_c1_seq1.mrna1;Target=comp163470_c1_seq1 647 1425 -
Chr2	stalkie_big_nohaplotig	exon	81828824	81829469	99	+	.	Parent=comp163470_c1_seq1.mrna1;Target=comp163470_c1_seq1 1 646 -
Chr2	stalkie_big_nohaplotig	CDS	81825021	81825531	.	+	0	Parent=comp163470_c1_seq1.mrna1;Target=comp163470_c1_seq1 1426 1936 .
Chr2	stalkie_big_nohaplotig	CDS	81827989	81828484	.	+	2	Parent=comp163470_c1_seq1.mrna1;Target=comp163470_c1_seq1 929 1425 .
Chr2	stalkie_big_nohaplotig	mRNA	81824982	81834530	.	+	.	ID=FBgn0039355.3.mrna1;geneID=FBgn0039355.3.path1;Name=FBgn0039355.3;Dir=sensecoverage=100.0;identity=99.5;matches=1450;mismatches=8;indels=0;unknowns=0;locus=RLOC_00018950
Chr2	stalkie_big_nohaplotig	exon	81824982	81825531	99	+	.	Parent=FBgn0039355.3.mrna1;Target=FBgn0039355.3 1 550 +
Chr2	stalkie_big_nohaplotig	exon	81833559	81834303	99	+	.	Parent=FBgn0039355.3.mrna1;Target=FBgn0039355.3 551 1295 +
Chr2	stalkie_big_nohaplotig	exon	81834368	81834530	100	+	.	Parent=FBgn0039355.3.mrna1;Target=FBgn0039355.3 1296 1458 +
Chr2	stalkie_big_nohaplotig	CDS	81824982	81825531	.	+	0	Parent=FBgn0039355.3.mrna1;Target=FBgn0039355.3 1 550 +
Chr2	stalkie_big_nohaplotig	CDS	81833559	81834303	.	+	2	Parent=FBgn0039355.3.mrna1;Target=FBgn0039355.3 551 1295 +
Chr2	stalkie_big_nohaplotig	CDS	81834368	81834530	.	+	1	Parent=FBgn0039355.3.mrna1;Target=FBgn0039355.3 1296 1458 +
Chr2	gffcl	locus	81821091	81822361	.	-	.	ID=RLOC_00018951;geneIDs=comp160757_c0_seq1.path1;transcripts=comp160757_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81821091	81822361	.	-	.	ID=comp160757_c0_seq1.mrna1;geneID=comp160757_c0_seq1.path1;Name=comp160757_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1266;mismatches=4;indels=5;unknowns=0;Target=comp160757_c0_seq1 1274 1 .;CDS_Target=comp160757_c0_seq1 1202 1008 .;locus=RLOC_00018951
Chr2	stalkie_big_nohaplotig	exon	81821091	81822361	99	-	.	Parent=comp160757_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	81821163	81821357	.	-	0	Parent=comp160757_c0_seq1.mrna1
Chr2	gffcl	locus	81830657	81831031	.	-	.	ID=RLOC_00018952;geneIDs=comp143699_c0_seq1.path1;transcripts=comp143699_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81830657	81831031	.	-	.	ID=comp143699_c0_seq1.mrna1;geneID=comp143699_c0_seq1.path1;Name=comp143699_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=369;mismatches=6;indels=0;unknowns=0;Target=comp143699_c0_seq1 375 1 .;CDS_Target=comp143699_c0_seq1 87 25 .;locus=RLOC_00018952
Chr2	stalkie_big_nohaplotig	exon	81830657	81831031	98	-	.	Parent=comp143699_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	81830945	81831007	.	-	0	Parent=comp143699_c0_seq1.mrna1
Chr2	gffcl	locus	81836569	81837608	.	+	.	ID=RLOC_00018953;geneIDs=FBgn0039355.1.path1;transcripts=FBgn0039355.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81836569	81837608	.	+	.	ID=FBgn0039355.1.mrna1;geneID=FBgn0039355.1.path1;Name=FBgn0039355.1;Dir=sensecoverage=97.8;identity=99.7;matches=971;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018953
Chr2	stalkie_big_nohaplotig	exon	81836569	81837355	99	+	.	Parent=FBgn0039355.1.mrna1;Target=FBgn0039355.1 23 809 +
Chr2	stalkie_big_nohaplotig	exon	81837422	81837608	99	+	.	Parent=FBgn0039355.1.mrna1;Target=FBgn0039355.1 810 996 +
Chr2	stalkie_big_nohaplotig	CDS	81836571	81837355	.	+	0	Parent=FBgn0039355.1.mrna1;Target=FBgn0039355.1 25 809 +
Chr2	stalkie_big_nohaplotig	CDS	81837422	81837608	.	+	1	Parent=FBgn0039355.1.mrna1;Target=FBgn0039355.1 810 996 +
Chr2	gffcl	locus	81841836	81869435	.	-	.	ID=RLOC_00018954;geneIDs=FBgn0039354.1.path1;transcripts=FBgn0039354.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81841836	81869435	.	-	.	ID=FBgn0039354.1.mrna1;geneID=FBgn0039354.1.path1;Name=FBgn0039354.1;Dir=sensecoverage=99.9;identity=99.3;matches=2318;mismatches=8;indels=9;unknowns=0;locus=RLOC_00018954
Chr2	stalkie_big_nohaplotig	exon	81841836	81841876	100	-	.	Parent=FBgn0039354.1.mrna1;Target=FBgn0039354.1 2288 2328 +
Chr2	stalkie_big_nohaplotig	exon	81841967	81842167	98	-	.	Parent=FBgn0039354.1.mrna1;Target=FBgn0039354.1 2087 2287 +
Chr2	stalkie_big_nohaplotig	exon	81842320	81842864	100	-	.	Parent=FBgn0039354.1.mrna1;Target=FBgn0039354.1 1542 2086 +
Chr2	stalkie_big_nohaplotig	exon	81842960	81843403	100	-	.	Parent=FBgn0039354.1.mrna1;Target=FBgn0039354.1 1098 1541 +
Chr2	stalkie_big_nohaplotig	exon	81844790	81844861	100	-	.	Parent=FBgn0039354.1.mrna1;Target=FBgn0039354.1 1026 1097 +
Chr2	stalkie_big_nohaplotig	exon	81857332	81857403	100	-	.	Parent=FBgn0039354.1.mrna1;Target=FBgn0039354.1 954 1025 +
Chr2	stalkie_big_nohaplotig	exon	81862922	81862990	100	-	.	Parent=FBgn0039354.1.mrna1;Target=FBgn0039354.1 885 953 +
Chr2	stalkie_big_nohaplotig	exon	81866298	81866582	98	-	.	Parent=FBgn0039354.1.mrna1;Target=FBgn0039354.1 600 884 +
Chr2	stalkie_big_nohaplotig	exon	81866792	81866871	100	-	.	Parent=FBgn0039354.1.mrna1;Target=FBgn0039354.1 520 599 +
Chr2	stalkie_big_nohaplotig	exon	81866984	81867084	100	-	.	Parent=FBgn0039354.1.mrna1;Target=FBgn0039354.1 419 519 +
Chr2	stalkie_big_nohaplotig	exon	81869011	81869435	97	-	.	Parent=FBgn0039354.1.mrna1;Target=FBgn0039354.1 3 418 +
Chr2	stalkie_big_nohaplotig	CDS	81841836	81841876	.	-	2	Parent=FBgn0039354.1.mrna1;Target=FBgn0039354.1 2288 2328 +
Chr2	stalkie_big_nohaplotig	CDS	81841967	81842167	.	-	2	Parent=FBgn0039354.1.mrna1;Target=FBgn0039354.1 2087 2287 +
Chr2	stalkie_big_nohaplotig	CDS	81842320	81842864	.	-	1	Parent=FBgn0039354.1.mrna1;Target=FBgn0039354.1 1542 2086 +
Chr2	stalkie_big_nohaplotig	CDS	81842960	81843403	.	-	1	Parent=FBgn0039354.1.mrna1;Target=FBgn0039354.1 1098 1541 +
Chr2	stalkie_big_nohaplotig	CDS	81844790	81844861	.	-	1	Parent=FBgn0039354.1.mrna1;Target=FBgn0039354.1 1026 1097 +
Chr2	stalkie_big_nohaplotig	CDS	81857332	81857403	.	-	1	Parent=FBgn0039354.1.mrna1;Target=FBgn0039354.1 954 1025 +
Chr2	stalkie_big_nohaplotig	CDS	81862922	81862990	.	-	1	Parent=FBgn0039354.1.mrna1;Target=FBgn0039354.1 885 953 +
Chr2	stalkie_big_nohaplotig	CDS	81866298	81866582	.	-	1	Parent=FBgn0039354.1.mrna1;Target=FBgn0039354.1 600 884 +
Chr2	stalkie_big_nohaplotig	CDS	81866792	81866871	.	-	0	Parent=FBgn0039354.1.mrna1;Target=FBgn0039354.1 520 599 +
Chr2	stalkie_big_nohaplotig	CDS	81866984	81867084	.	-	2	Parent=FBgn0039354.1.mrna1;Target=FBgn0039354.1 419 519 +
Chr2	stalkie_big_nohaplotig	CDS	81869011	81869434	.	-	0	Parent=FBgn0039354.1.mrna1;Target=FBgn0039354.1 4 418 +
Chr2	gffcl	locus	81865308	83298708	.	-	.	ID=RLOC_00018955;geneIDs=comp158869_c0_seq1.path1;transcripts=comp158869_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81865308	83298708	.	-	.	ID=comp158869_c0_seq1.mrna1;geneID=comp158869_c0_seq1.path1;Name=comp158869_c0_seq1;Dir=indeterminatecoverage=90.4;identity=98.7;matches=1787;mismatches=5;indels=19;unknowns=0;Target=comp158869_c0_seq1 1388 1248 .;locus=RLOC_00018955
Chr2	stalkie_big_nohaplotig	exon	81865308	81865315	100	-	.	Parent=comp158869_c0_seq1.mrna1;Target=comp158869_c0_seq1 1811 1804 .
Chr2	stalkie_big_nohaplotig	exon	81865643	81865647	100	-	.	Parent=comp158869_c0_seq1.mrna1;Target=comp158869_c0_seq1 1803 1799 .
Chr2	stalkie_big_nohaplotig	exon	81869613	81869618	100	-	.	Parent=comp158869_c0_seq1.mrna1;Target=comp158869_c0_seq1 1798 1793 .
Chr2	stalkie_big_nohaplotig	exon	83296936	83298708	98	-	.	Parent=comp158869_c0_seq1.mrna1;Target=comp158869_c0_seq1 1792 1 .
Chr2	stalkie_big_nohaplotig	CDS	83297340	83297480	.	-	0	Parent=comp158869_c0_seq1.mrna1
Chr2	gffcl	locus	81886630	81887170	.	-	.	ID=RLOC_00018956;geneIDs=comp149599_c0_seq1.path1;transcripts=comp149599_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81886630	81887170	.	-	.	ID=comp149599_c0_seq1.mrna1;geneID=comp149599_c0_seq1.path1;Name=comp149599_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.5;matches=513;mismatches=28;indels=26;unknowns=0;Target=comp149599_c0_seq1 567 1 .;CDS_Target=comp149599_c0_seq1 288 160 .;locus=RLOC_00018956
Chr2	stalkie_big_nohaplotig	exon	81886630	81887170	90	-	.	Parent=comp149599_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	81886909	81887037	.	-	0	Parent=comp149599_c0_seq1.mrna1
Chr2	gffcl	locus	81913314	81913419	.	+	.	ID=RLOC_00018957;geneIDs=comp140966_c1_seq1.path5;transcripts=comp140966_c1_seq1.mrna5
Chr2	stalkie_big_nohaplotig	mRNA	81913314	81913419	.	+	.	ID=comp140966_c1_seq1.mrna5;geneID=comp140966_c1_seq1.path5;Name=comp140966_c1_seq1;Dir=indeterminatecoverage=19.1;identity=86.8;matches=92;mismatches=14;indels=0;unknowns=0;Target=comp140966_c1_seq1 515 410 .;CDS_Target=comp140966_c1_seq1 456 412 .;locus=RLOC_00018957
Chr2	stalkie_big_nohaplotig	exon	81913314	81913419	86	+	.	Parent=comp140966_c1_seq1.mrna5
Chr2	stalkie_big_nohaplotig	CDS	81913316	81913360	.	+	0	Parent=comp140966_c1_seq1.mrna5
Chr2	gffcl	locus	81951723	81953013	.	+	.	ID=RLOC_00018958;geneIDs=comp156390_c0_seq1.path1;transcripts=comp156390_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81951723	81953013	.	+	.	ID=comp156390_c0_seq1.mrna1;geneID=comp156390_c0_seq1.path1;Name=comp156390_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.2;matches=1253;mismatches=18;indels=45;unknowns=0;Target=comp156390_c0_seq1 1296 1 .;CDS_Target=comp156390_c0_seq1 462 439 .;locus=RLOC_00018958
Chr2	stalkie_big_nohaplotig	exon	81951723	81953013	95	+	.	Parent=comp156390_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	81952155	81952179	.	+	0	Parent=comp156390_c0_seq1.mrna1
Chr2	gffcl	locus	81989348	81989864	.	+	.	ID=RLOC_00018959;geneIDs=comp107030_c0_seq1.path1;transcripts=comp107030_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81989348	81989864	.	+	.	ID=comp107030_c0_seq1.mrna1;geneID=comp107030_c0_seq1.path1;Name=comp107030_c0_seq1;Dir=indeterminatecoverage=94.2;identity=100.0;matches=517;mismatches=0;indels=0;unknowns=0;Target=comp107030_c0_seq1 517 1 .;CDS_Target=comp107030_c0_seq1 113 3 .;locus=RLOC_00018959
Chr2	stalkie_big_nohaplotig	exon	81989348	81989864	100	+	.	Parent=comp107030_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	81989350	81989460	.	+	0	Parent=comp107030_c0_seq1.mrna1
Chr2	gffcl	locus	81989947	81990646	.	+	.	ID=RLOC_00018960;geneIDs=FBgn0003651.2.path1;transcripts=FBgn0003651.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	81989947	81990646	.	+	.	ID=FBgn0003651.2.mrna1;geneID=FBgn0003651.2.path1;Name=FBgn0003651.2;Dir=indeterminatecoverage=41.2;identity=100.0;matches=700;mismatches=0;indels=0;unknowns=0;Target=FBgn0003651.2 700 1 .;locus=RLOC_00018960
Chr2	stalkie_big_nohaplotig	exon	81989947	81990646	100	+	.	Parent=FBgn0003651.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	81989947	81990646	.	+	0	Parent=FBgn0003651.2.mrna1
Chr2	gffcl	locus	82002620	82112877	.	-	.	ID=RLOC_00018961;geneIDs=FBgn0003651.2.path2;transcripts=FBgn0003651.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	82002620	82112877	.	-	.	ID=FBgn0003651.2.mrna2;geneID=FBgn0003651.2.path2;Name=FBgn0003651.2;Dir=sensecoverage=58.8;identity=99.4;matches=995;mismatches=6;indels=0;unknowns=0;locus=RLOC_00018961
Chr2	stalkie_big_nohaplotig	exon	82002620	82002733	100	-	.	Parent=FBgn0003651.2.mrna2;Target=FBgn0003651.2 1588 1701 +
Chr2	stalkie_big_nohaplotig	exon	82003203	82003360	99	-	.	Parent=FBgn0003651.2.mrna2;Target=FBgn0003651.2 1430 1587 +
Chr2	stalkie_big_nohaplotig	exon	82018543	82019088	99	-	.	Parent=FBgn0003651.2.mrna2;Target=FBgn0003651.2 884 1429 +
Chr2	stalkie_big_nohaplotig	exon	82028083	82028232	100	-	.	Parent=FBgn0003651.2.mrna2;Target=FBgn0003651.2 734 883 +
Chr2	stalkie_big_nohaplotig	exon	82040839	82040845	100	-	.	Parent=FBgn0003651.2.mrna2;Target=FBgn0003651.2 727 733 +
Chr2	stalkie_big_nohaplotig	exon	82045674	82045677	100	-	.	Parent=FBgn0003651.2.mrna2;Target=FBgn0003651.2 723 726 +
Chr2	stalkie_big_nohaplotig	exon	82069146	82069148	100	-	.	Parent=FBgn0003651.2.mrna2;Target=FBgn0003651.2 720 722 +
Chr2	stalkie_big_nohaplotig	exon	82073450	82073452	100	-	.	Parent=FBgn0003651.2.mrna2;Target=FBgn0003651.2 717 719 +
Chr2	stalkie_big_nohaplotig	exon	82097574	82097575	100	-	.	Parent=FBgn0003651.2.mrna2;Target=FBgn0003651.2 715 716 +
Chr2	stalkie_big_nohaplotig	exon	82105179	82105186	100	-	.	Parent=FBgn0003651.2.mrna2;Target=FBgn0003651.2 707 714 +
Chr2	stalkie_big_nohaplotig	exon	82112872	82112877	100	-	.	Parent=FBgn0003651.2.mrna2;Target=FBgn0003651.2 701 706 +
Chr2	stalkie_big_nohaplotig	CDS	82002620	82002733	.	-	2	Parent=FBgn0003651.2.mrna2;Target=FBgn0003651.2 1588 1701 +
Chr2	stalkie_big_nohaplotig	CDS	82003203	82003360	.	-	1	Parent=FBgn0003651.2.mrna2;Target=FBgn0003651.2 1430 1587 +
Chr2	stalkie_big_nohaplotig	CDS	82018543	82019088	.	-	1	Parent=FBgn0003651.2.mrna2;Target=FBgn0003651.2 884 1429 +
Chr2	stalkie_big_nohaplotig	CDS	82028083	82028232	.	-	1	Parent=FBgn0003651.2.mrna2;Target=FBgn0003651.2 734 883 +
Chr2	stalkie_big_nohaplotig	CDS	82040839	82040845	.	-	2	Parent=FBgn0003651.2.mrna2;Target=FBgn0003651.2 727 733 +
Chr2	stalkie_big_nohaplotig	CDS	82045674	82045677	.	-	0	Parent=FBgn0003651.2.mrna2;Target=FBgn0003651.2 723 726 +
Chr2	stalkie_big_nohaplotig	CDS	82069146	82069148	.	-	0	Parent=FBgn0003651.2.mrna2;Target=FBgn0003651.2 720 722 +
Chr2	stalkie_big_nohaplotig	CDS	82073450	82073452	.	-	0	Parent=FBgn0003651.2.mrna2;Target=FBgn0003651.2 717 719 +
Chr2	stalkie_big_nohaplotig	CDS	82097574	82097575	.	-	2	Parent=FBgn0003651.2.mrna2;Target=FBgn0003651.2 715 716 +
Chr2	stalkie_big_nohaplotig	CDS	82105179	82105186	.	-	1	Parent=FBgn0003651.2.mrna2;Target=FBgn0003651.2 707 714 +
Chr2	stalkie_big_nohaplotig	CDS	82112872	82112877	.	-	1	Parent=FBgn0003651.2.mrna2;Target=FBgn0003651.2 701 706 +
Chr2	gffcl	locus	82072255	82075013	.	-	.	ID=RLOC_00018962;geneIDs=comp158179_c0_seq1.path1;transcripts=comp158179_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82072255	82075013	.	-	.	ID=comp158179_c0_seq1.mrna1;geneID=comp158179_c0_seq1.path1;Name=comp158179_c0_seq1;Dir=sensecoverage=99.5;identity=99.3;matches=1328;mismatches=7;indels=2;unknowns=0;Target=comp158179_c0_seq1 156 617 +;locus=RLOC_00018962
Chr2	stalkie_big_nohaplotig	exon	82072255	82072655	99	-	.	Parent=comp158179_c0_seq1.mrna1;Target=comp158179_c0_seq1 944 1344 +
Chr2	stalkie_big_nohaplotig	exon	82072720	82072939	99	-	.	Parent=comp158179_c0_seq1.mrna1;Target=comp158179_c0_seq1 724 943 +
Chr2	stalkie_big_nohaplotig	exon	82074300	82075013	99	-	.	Parent=comp158179_c0_seq1.mrna1;Target=comp158179_c0_seq1 8 723 +
Chr2	stalkie_big_nohaplotig	CDS	82074406	82074865	.	-	0	Parent=comp158179_c0_seq1.mrna1
Chr2	gffcl	locus	82122434	82123153	.	+	.	ID=RLOC_00018963;geneIDs=comp156280_c0_seq1.path1;transcripts=comp156280_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82122434	82123153	.	+	.	ID=comp156280_c0_seq1.mrna1;geneID=comp156280_c0_seq1.path1;Name=comp156280_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.4;matches=678;mismatches=17;indels=1;unknowns=0;Target=comp156280_c0_seq1 518 321 .;locus=RLOC_00018963
Chr2	stalkie_big_nohaplotig	exon	82122434	82122679	97	+	.	Parent=comp156280_c0_seq1.mrna1;Target=comp156280_c0_seq1 247 2 .
Chr2	stalkie_big_nohaplotig	exon	82122705	82123153	97	+	.	Parent=comp156280_c0_seq1.mrna1;Target=comp156280_c0_seq1 697 248 .
Chr2	stalkie_big_nohaplotig	CDS	82122778	82122974	.	+	0	Parent=comp156280_c0_seq1.mrna1
Chr2	gffcl	locus	82123974	82124499	.	-	.	ID=RLOC_00018964;geneIDs=comp149854_c0_seq1.path1;transcripts=comp149854_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82123974	82124499	.	-	.	ID=comp149854_c0_seq1.mrna1;geneID=comp149854_c0_seq1.path1;Name=comp149854_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=515;mismatches=11;indels=2;unknowns=0;Target=comp149854_c0_seq1 528 1 .;CDS_Target=comp149854_c0_seq1 301 2 .;locus=RLOC_00018964
Chr2	stalkie_big_nohaplotig	exon	82123974	82124499	97	-	.	Parent=comp149854_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	82124201	82124498	.	-	0	Parent=comp149854_c0_seq1.mrna1
Chr2	gffcl	locus	82135130	82136661	.	+	.	ID=RLOC_00018965;geneIDs=FBgn0051288.2.path1;transcripts=FBgn0051288.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82135130	82136661	.	+	.	ID=FBgn0051288.2.mrna1;geneID=FBgn0051288.2.path1;Name=FBgn0051288.2;Dir=sensecoverage=99.8;identity=99.2;matches=1280;mismatches=10;indels=0;unknowns=0;locus=RLOC_00018965
Chr2	stalkie_big_nohaplotig	exon	82135130	82135337	98	+	.	Parent=FBgn0051288.2.mrna1;Target=FBgn0051288.2 4 211 +
Chr2	stalkie_big_nohaplotig	exon	82135449	82135954	99	+	.	Parent=FBgn0051288.2.mrna1;Target=FBgn0051288.2 212 717 +
Chr2	stalkie_big_nohaplotig	exon	82136019	82136388	99	+	.	Parent=FBgn0051288.2.mrna1;Target=FBgn0051288.2 718 1087 +
Chr2	stalkie_big_nohaplotig	exon	82136456	82136661	99	+	.	Parent=FBgn0051288.2.mrna1;Target=FBgn0051288.2 1088 1293 +
Chr2	stalkie_big_nohaplotig	CDS	82135130	82135337	.	+	0	Parent=FBgn0051288.2.mrna1;Target=FBgn0051288.2 4 211 +
Chr2	stalkie_big_nohaplotig	CDS	82135449	82135954	.	+	2	Parent=FBgn0051288.2.mrna1;Target=FBgn0051288.2 212 717 +
Chr2	stalkie_big_nohaplotig	CDS	82136019	82136388	.	+	0	Parent=FBgn0051288.2.mrna1;Target=FBgn0051288.2 718 1087 +
Chr2	stalkie_big_nohaplotig	CDS	82136456	82136661	.	+	2	Parent=FBgn0051288.2.mrna1;Target=FBgn0051288.2 1088 1293 +
Chr2	gffcl	locus	82140857	82143332	.	+	.	ID=RLOC_00018966;geneIDs=FBgn0051102.1.path1;transcripts=FBgn0051102.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82140857	82143332	.	+	.	ID=FBgn0051102.1.mrna1;geneID=FBgn0051102.1.path1;Name=FBgn0051102.1;Dir=sensecoverage=100.0;identity=98.1;matches=1317;mismatches=3;indels=23;unknowns=0;locus=RLOC_00018966
Chr2	stalkie_big_nohaplotig	exon	82140857	82141147	92	+	.	Parent=FBgn0051102.1.mrna1;Target=FBgn0051102.1 1 268 +
Chr2	stalkie_big_nohaplotig	exon	82141209	82141705	100	+	.	Parent=FBgn0051102.1.mrna1;Target=FBgn0051102.1 269 765 +
Chr2	stalkie_big_nohaplotig	exon	82141769	82142132	99	+	.	Parent=FBgn0051102.1.mrna1;Target=FBgn0051102.1 766 1129 +
Chr2	stalkie_big_nohaplotig	exon	82143142	82143332	99	+	.	Parent=FBgn0051102.1.mrna1;Target=FBgn0051102.1 1130 1320 +
Chr2	stalkie_big_nohaplotig	CDS	82140943	82141147	.	+	0	Parent=FBgn0051102.1.mrna1;Target=FBgn0051102.1 64 268 +
Chr2	stalkie_big_nohaplotig	CDS	82141209	82141705	.	+	2	Parent=FBgn0051102.1.mrna1;Target=FBgn0051102.1 269 765 +
Chr2	stalkie_big_nohaplotig	CDS	82141769	82142132	.	+	0	Parent=FBgn0051102.1.mrna1;Target=FBgn0051102.1 766 1129 +
Chr2	stalkie_big_nohaplotig	CDS	82143142	82143332	.	+	2	Parent=FBgn0051102.1.mrna1;Target=FBgn0051102.1 1130 1320 +
Chr2	gffcl	locus	82146699	82190006	.	+	.	ID=RLOC_00018967;geneIDs=FBgn0039311.1.path1,comp156335_c0_seq1.path1;transcripts=comp156335_c0_seq1.mrna1,FBgn0039311.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82146699	82190006	.	+	.	ID=comp156335_c0_seq1.mrna1;geneID=comp156335_c0_seq1.path1;Name=comp156335_c0_seq1;Dir=antisensecoverage=74.9;identity=97.2;matches=761;mismatches=8;indels=14;unknowns=0;locus=RLOC_00018967
Chr2	stalkie_big_nohaplotig	exon	82146699	82146712	92	+	.	Parent=comp156335_c0_seq1.mrna1;Target=comp156335_c0_seq1 813 825 -
Chr2	stalkie_big_nohaplotig	exon	82151858	82151867	100	+	.	Parent=comp156335_c0_seq1.mrna1;Target=comp156335_c0_seq1 803 812 -
Chr2	stalkie_big_nohaplotig	exon	82153042	82153051	90	+	.	Parent=comp156335_c0_seq1.mrna1;Target=comp156335_c0_seq1 793 802 -
Chr2	stalkie_big_nohaplotig	exon	82159080	82159082	100	+	.	Parent=comp156335_c0_seq1.mrna1;Target=comp156335_c0_seq1 790 792 -
Chr2	stalkie_big_nohaplotig	exon	82159098	82159104	100	+	.	Parent=comp156335_c0_seq1.mrna1;Target=comp156335_c0_seq1 732 738 -
Chr2	stalkie_big_nohaplotig	exon	82163112	82163113	100	+	.	Parent=comp156335_c0_seq1.mrna1;Target=comp156335_c0_seq1 730 731 -
Chr2	stalkie_big_nohaplotig	exon	82164099	82164101	100	+	.	Parent=comp156335_c0_seq1.mrna1;Target=comp156335_c0_seq1 727 729 -
Chr2	stalkie_big_nohaplotig	exon	82171019	82171025	100	+	.	Parent=comp156335_c0_seq1.mrna1;Target=comp156335_c0_seq1 720 726 -
Chr2	stalkie_big_nohaplotig	exon	82178773	82178783	90	+	.	Parent=comp156335_c0_seq1.mrna1;Target=comp156335_c0_seq1 704 714 -
Chr2	stalkie_big_nohaplotig	exon	82189239	82189624	98	+	.	Parent=comp156335_c0_seq1.mrna1;Target=comp156335_c0_seq1 318 703 -
Chr2	stalkie_big_nohaplotig	exon	82189677	82190006	95	+	.	Parent=comp156335_c0_seq1.mrna1;Target=comp156335_c0_seq1 1 317 -
Chr2	stalkie_big_nohaplotig	CDS	82189551	82189624	.	+	0	Parent=comp156335_c0_seq1.mrna1;Target=comp156335_c0_seq1 318 391 .
Chr2	stalkie_big_nohaplotig	CDS	82189677	82189818	.	+	1	Parent=comp156335_c0_seq1.mrna1;Target=comp156335_c0_seq1 176 317 .
Chr2	stalkie_big_nohaplotig	mRNA	82178343	82179733	.	+	.	ID=FBgn0039311.1.mrna1;geneID=FBgn0039311.1.path1;Name=FBgn0039311.1;Dir=sensecoverage=100.0;identity=99.8;matches=1291;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018967
Chr2	stalkie_big_nohaplotig	exon	82178343	82179438	99	+	.	Parent=FBgn0039311.1.mrna1;Target=FBgn0039311.1 1 1096 +
Chr2	stalkie_big_nohaplotig	exon	82179537	82179733	100	+	.	Parent=FBgn0039311.1.mrna1;Target=FBgn0039311.1 1097 1293 +
Chr2	stalkie_big_nohaplotig	CDS	82178343	82179438	.	+	0	Parent=FBgn0039311.1.mrna1;Target=FBgn0039311.1 1 1096 +
Chr2	stalkie_big_nohaplotig	CDS	82179537	82179733	.	+	2	Parent=FBgn0039311.1.mrna1;Target=FBgn0039311.1 1097 1293 +
Chr2	gffcl	locus	82153089	82154770	.	.	.	ID=RLOC_00018969;geneIDs=FBgn0039313.1.path1,comp116947_c0_seq1.path1;transcripts=FBgn0039313.1.mrna1,comp116947_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82153089	82154770	.	-	.	ID=FBgn0039313.1.mrna1;geneID=FBgn0039313.1.path1;Name=FBgn0039313.1;Dir=sensecoverage=100.0;identity=99.5;matches=1337;mismatches=7;indels=0;unknowns=0;locus=RLOC_00018969
Chr2	stalkie_big_nohaplotig	exon	82153089	82153285	100	-	.	Parent=FBgn0039313.1.mrna1;Target=FBgn0039313.1 1148 1344 +
Chr2	stalkie_big_nohaplotig	exon	82153624	82154770	99	-	.	Parent=FBgn0039313.1.mrna1;Target=FBgn0039313.1 1 1147 +
Chr2	stalkie_big_nohaplotig	CDS	82153089	82153285	.	-	2	Parent=FBgn0039313.1.mrna1;Target=FBgn0039313.1 1148 1344 +
Chr2	stalkie_big_nohaplotig	CDS	82153624	82154770	.	-	0	Parent=FBgn0039313.1.mrna1;Target=FBgn0039313.1 1 1147 +
Chr2	stalkie_big_nohaplotig	mRNA	82153427	82153647	.	+	.	ID=comp116947_c0_seq1.mrna1;geneID=comp116947_c0_seq1.path1;Name=comp116947_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.7;matches=207;mismatches=13;indels=1;unknowns=0;Target=comp116947_c0_seq1 220 1 .;CDS_Target=comp116947_c0_seq1 113 33 .;locus=RLOC_00018969
Chr2	stalkie_big_nohaplotig	exon	82153427	82153647	93	+	.	Parent=comp116947_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	82153459	82153540	.	+	0	Parent=comp116947_c0_seq1.mrna1
Chr2	gffcl	locus	82168801	82170872	.	+	.	ID=RLOC_00018970;geneIDs=FBgn0039312.1.path1;transcripts=FBgn0039312.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82168801	82170872	.	+	.	ID=FBgn0039312.1.mrna1;geneID=FBgn0039312.1.path1;Name=FBgn0039312.1;Dir=sensecoverage=100.0;identity=99.8;matches=1258;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018970
Chr2	stalkie_big_nohaplotig	exon	82168801	82169857	99	+	.	Parent=FBgn0039312.1.mrna1;Target=FBgn0039312.1 1 1057 +
Chr2	stalkie_big_nohaplotig	exon	82170670	82170872	100	+	.	Parent=FBgn0039312.1.mrna1;Target=FBgn0039312.1 1058 1260 +
Chr2	stalkie_big_nohaplotig	CDS	82168801	82169857	.	+	0	Parent=FBgn0039312.1.mrna1;Target=FBgn0039312.1 1 1057 +
Chr2	stalkie_big_nohaplotig	CDS	82170670	82170872	.	+	2	Parent=FBgn0039312.1.mrna1;Target=FBgn0039312.1 1058 1260 +
Chr2	gffcl	locus	82175312	82177710	.	+	.	ID=RLOC_00018971;geneIDs=FBgn0039311.2.path1,comp142155_c0_seq1.path1;transcripts=FBgn0039311.2.mrna1,comp142155_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82175312	82176745	.	+	.	ID=FBgn0039311.2.mrna1;geneID=FBgn0039311.2.path1;Name=FBgn0039311.2;Dir=sensecoverage=100.0;identity=98.5;matches=1312;mismatches=20;indels=0;unknowns=0;locus=RLOC_00018971
Chr2	stalkie_big_nohaplotig	exon	82175312	82176446	98	+	.	Parent=FBgn0039311.2.mrna1;Target=FBgn0039311.2 1 1135 +
Chr2	stalkie_big_nohaplotig	exon	82176549	82176745	97	+	.	Parent=FBgn0039311.2.mrna1;Target=FBgn0039311.2 1136 1332 +
Chr2	stalkie_big_nohaplotig	CDS	82175396	82176446	.	+	0	Parent=FBgn0039311.2.mrna1;Target=FBgn0039311.2 85 1135 +
Chr2	stalkie_big_nohaplotig	CDS	82176549	82176745	.	+	2	Parent=FBgn0039311.2.mrna1;Target=FBgn0039311.2 1136 1332 +
Chr2	stalkie_big_nohaplotig	mRNA	82176658	82177710	.	+	.	ID=comp142155_c0_seq1.mrna1;geneID=comp142155_c0_seq1.path1;Name=comp142155_c0_seq1;Dir=sensecoverage=97.7;identity=91.8;matches=597;mismatches=44;indels=9;unknowns=0;Target=comp142155_c0_seq1 79 219 +;locus=RLOC_00018971
Chr2	stalkie_big_nohaplotig	exon	82176658	82176679	100	+	.	Parent=comp142155_c0_seq1.mrna1;Target=comp142155_c0_seq1 1 22 +
Chr2	stalkie_big_nohaplotig	exon	82176995	82177429	89	+	.	Parent=comp142155_c0_seq1.mrna1;Target=comp142155_c0_seq1 23 456 +
Chr2	stalkie_big_nohaplotig	exon	82177522	82177710	95	+	.	Parent=comp142155_c0_seq1.mrna1;Target=comp142155_c0_seq1 457 645 +
Chr2	stalkie_big_nohaplotig	CDS	82177051	82177192	.	+	0	Parent=comp142155_c0_seq1.mrna1
Chr2	gffcl	locus	82181453	82182810	.	-	.	ID=RLOC_00018972;geneIDs=FBgn0039309.1.path1;transcripts=FBgn0039309.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82181453	82182810	.	-	.	ID=FBgn0039309.1.mrna1;geneID=FBgn0039309.1.path1;Name=FBgn0039309.1;Dir=sensecoverage=100.0;identity=99.2;matches=1283;mismatches=10;indels=0;unknowns=0;locus=RLOC_00018972
Chr2	stalkie_big_nohaplotig	exon	82181453	82181649	98	-	.	Parent=FBgn0039309.1.mrna1;Target=FBgn0039309.1 1097 1293 +
Chr2	stalkie_big_nohaplotig	exon	82181715	82182810	99	-	.	Parent=FBgn0039309.1.mrna1;Target=FBgn0039309.1 1 1096 +
Chr2	stalkie_big_nohaplotig	CDS	82181453	82181649	.	-	2	Parent=FBgn0039309.1.mrna1;Target=FBgn0039309.1 1097 1293 +
Chr2	stalkie_big_nohaplotig	CDS	82181715	82182810	.	-	0	Parent=FBgn0039309.1.mrna1;Target=FBgn0039309.1 1 1096 +
Chr2	gffcl	locus	82183555	82187597	.	-	.	ID=RLOC_00018973;geneIDs=FBgn0039306.1.path1;transcripts=FBgn0039306.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82183555	82187597	.	-	.	ID=FBgn0039306.1.mrna1;geneID=FBgn0039306.1.path1;Name=FBgn0039306.1;Dir=sensecoverage=100.0;identity=99.1;matches=1670;mismatches=16;indels=0;unknowns=0;locus=RLOC_00018973
Chr2	stalkie_big_nohaplotig	exon	82183555	82184277	98	-	.	Parent=FBgn0039306.1.mrna1;Target=FBgn0039306.1 964 1686 +
Chr2	stalkie_big_nohaplotig	exon	82184335	82184506	99	-	.	Parent=FBgn0039306.1.mrna1;Target=FBgn0039306.1 792 963 +
Chr2	stalkie_big_nohaplotig	exon	82186617	82186808	99	-	.	Parent=FBgn0039306.1.mrna1;Target=FBgn0039306.1 600 791 +
Chr2	stalkie_big_nohaplotig	exon	82186863	82187241	99	-	.	Parent=FBgn0039306.1.mrna1;Target=FBgn0039306.1 221 599 +
Chr2	stalkie_big_nohaplotig	exon	82187308	82187449	100	-	.	Parent=FBgn0039306.1.mrna1;Target=FBgn0039306.1 79 220 +
Chr2	stalkie_big_nohaplotig	exon	82187520	82187597	100	-	.	Parent=FBgn0039306.1.mrna1;Target=FBgn0039306.1 1 78 +
Chr2	stalkie_big_nohaplotig	CDS	82183555	82184277	.	-	0	Parent=FBgn0039306.1.mrna1;Target=FBgn0039306.1 964 1686 +
Chr2	stalkie_big_nohaplotig	CDS	82184335	82184506	.	-	1	Parent=FBgn0039306.1.mrna1;Target=FBgn0039306.1 792 963 +
Chr2	stalkie_big_nohaplotig	CDS	82186617	82186808	.	-	1	Parent=FBgn0039306.1.mrna1;Target=FBgn0039306.1 600 791 +
Chr2	stalkie_big_nohaplotig	CDS	82186863	82187241	.	-	2	Parent=FBgn0039306.1.mrna1;Target=FBgn0039306.1 221 599 +
Chr2	stalkie_big_nohaplotig	CDS	82187308	82187449	.	-	0	Parent=FBgn0039306.1.mrna1;Target=FBgn0039306.1 79 220 +
Chr2	stalkie_big_nohaplotig	CDS	82187520	82187597	.	-	0	Parent=FBgn0039306.1.mrna1;Target=FBgn0039306.1 1 78 +
Chr2	gffcl	locus	82190648	82192821	.	-	.	ID=RLOC_00018974;geneIDs=FBgn0038762.path1;transcripts=FBgn0038762.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82190648	82192821	.	-	.	ID=FBgn0038762.mrna1;geneID=FBgn0038762.path1;Name=FBgn0038762;Dir=sensecoverage=100.0;identity=99.8;matches=1359;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018974
Chr2	stalkie_big_nohaplotig	exon	82190648	82190813	100	-	.	Parent=FBgn0038762.mrna1;Target=FBgn0038762 1197 1362 +
Chr2	stalkie_big_nohaplotig	exon	82190870	82191528	99	-	.	Parent=FBgn0038762.mrna1;Target=FBgn0038762 538 1196 +
Chr2	stalkie_big_nohaplotig	exon	82191588	82191709	100	-	.	Parent=FBgn0038762.mrna1;Target=FBgn0038762 416 537 +
Chr2	stalkie_big_nohaplotig	exon	82191782	82192043	99	-	.	Parent=FBgn0038762.mrna1;Target=FBgn0038762 154 415 +
Chr2	stalkie_big_nohaplotig	exon	82192669	82192821	99	-	.	Parent=FBgn0038762.mrna1;Target=FBgn0038762 1 153 +
Chr2	stalkie_big_nohaplotig	CDS	82190648	82190813	.	-	1	Parent=FBgn0038762.mrna1;Target=FBgn0038762 1197 1362 +
Chr2	stalkie_big_nohaplotig	CDS	82190870	82191528	.	-	0	Parent=FBgn0038762.mrna1;Target=FBgn0038762 538 1196 +
Chr2	stalkie_big_nohaplotig	CDS	82191588	82191709	.	-	2	Parent=FBgn0038762.mrna1;Target=FBgn0038762 416 537 +
Chr2	stalkie_big_nohaplotig	CDS	82191782	82192043	.	-	0	Parent=FBgn0038762.mrna1;Target=FBgn0038762 154 415 +
Chr2	stalkie_big_nohaplotig	CDS	82192669	82192821	.	-	0	Parent=FBgn0038762.mrna1;Target=FBgn0038762 1 153 +
Chr2	gffcl	locus	82194125	82197464	.	-	.	ID=RLOC_00018975;geneIDs=Dv_FBgn0198269.path1;transcripts=Dv_FBgn0198269.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82194125	82197464	.	-	.	ID=Dv_FBgn0198269.mrna1;geneID=Dv_FBgn0198269.path1;Name=Dv_FBgn0198269;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1991;mismatches=10;indels=6;unknowns=0;locus=RLOC_00018975
Chr2	stalkie_big_nohaplotig	exon	82194125	82194401	95	-	.	Parent=Dv_FBgn0198269.mrna1;Target=Dv_FBgn0198269 2007 1725 .
Chr2	stalkie_big_nohaplotig	exon	82194453	82194515	100	-	.	Parent=Dv_FBgn0198269.mrna1;Target=Dv_FBgn0198269 1724 1662 .
Chr2	stalkie_big_nohaplotig	exon	82194591	82196206	99	-	.	Parent=Dv_FBgn0198269.mrna1;Target=Dv_FBgn0198269 1661 46 .
Chr2	stalkie_big_nohaplotig	exon	82197420	82197464	100	-	.	Parent=Dv_FBgn0198269.mrna1;Target=Dv_FBgn0198269 45 1 .
Chr2	stalkie_big_nohaplotig	CDS	82194125	82194401	.	-	1	Parent=Dv_FBgn0198269.mrna1;Target=Dv_FBgn0198269 2007 1725 .
Chr2	stalkie_big_nohaplotig	CDS	82194453	82194515	.	-	1	Parent=Dv_FBgn0198269.mrna1;Target=Dv_FBgn0198269 1724 1662 .
Chr2	stalkie_big_nohaplotig	CDS	82194591	82196206	.	-	0	Parent=Dv_FBgn0198269.mrna1;Target=Dv_FBgn0198269 1661 46 .
Chr2	stalkie_big_nohaplotig	CDS	82197420	82197464	.	-	0	Parent=Dv_FBgn0198269.mrna1;Target=Dv_FBgn0198269 45 1 .
Chr2	gffcl	locus	82205944	82207319	.	+	.	ID=RLOC_00018976;geneIDs=FBgn0037834.3.path1;transcripts=FBgn0037834.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82205944	82207319	.	+	.	ID=FBgn0037834.3.mrna1;geneID=FBgn0037834.3.path1;Name=FBgn0037834.3;Dir=sensecoverage=100.0;identity=99.4;matches=1312;mismatches=8;indels=0;unknowns=0;locus=RLOC_00018976
Chr2	stalkie_big_nohaplotig	exon	82205944	82206615	99	+	.	Parent=FBgn0037834.3.mrna1;Target=FBgn0037834.3 1 672 +
Chr2	stalkie_big_nohaplotig	exon	82206672	82207319	99	+	.	Parent=FBgn0037834.3.mrna1;Target=FBgn0037834.3 673 1320 +
Chr2	stalkie_big_nohaplotig	CDS	82205944	82206615	.	+	0	Parent=FBgn0037834.3.mrna1;Target=FBgn0037834.3 1 672 +
Chr2	stalkie_big_nohaplotig	CDS	82206672	82207319	.	+	0	Parent=FBgn0037834.3.mrna1;Target=FBgn0037834.3 673 1320 +
Chr2	gffcl	locus	82210140	82214546	.	+	.	ID=RLOC_00018977;geneIDs=ORF3176.path1;transcripts=ORF3176.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82210140	82214546	.	+	.	ID=ORF3176.mrna1;geneID=ORF3176.path1;Name=ORF3176;Dir=sensecoverage=100.0;identity=99.6;matches=756;mismatches=2;indels=1;unknowns=0;Target=ORF3176 3 38 +;locus=RLOC_00018977
Chr2	stalkie_big_nohaplotig	exon	82210140	82210213	97	+	.	Parent=ORF3176.mrna1;Target=ORF3176 1 75 +
Chr2	stalkie_big_nohaplotig	exon	82213812	82214004	100	+	.	Parent=ORF3176.mrna1;Target=ORF3176 76 268 +
Chr2	stalkie_big_nohaplotig	exon	82214056	82214546	99	+	.	Parent=ORF3176.mrna1;Target=ORF3176 269 759 +
Chr2	stalkie_big_nohaplotig	CDS	82210142	82210176	.	+	0	Parent=ORF3176.mrna1
Chr2	gffcl	locus	82247447	82248949	.	+	.	ID=RLOC_00018979;geneIDs=comp148125_c0_seq1.path1;transcripts=comp148125_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82247447	82248949	.	+	.	ID=comp148125_c0_seq1.mrna1;geneID=comp148125_c0_seq1.path1;Name=comp148125_c0_seq1;Dir=antisensecoverage=100.0;identity=97.4;matches=1005;mismatches=1;indels=26;unknowns=0;Target=comp148125_c0_seq1 274 435 .;locus=RLOC_00018979
Chr2	stalkie_big_nohaplotig	exon	82247447	82247492	100	+	.	Parent=comp148125_c0_seq1.mrna1;Target=comp148125_c0_seq1 961 1006 -
Chr2	stalkie_big_nohaplotig	exon	82247964	82248949	97	+	.	Parent=comp148125_c0_seq1.mrna1;Target=comp148125_c0_seq1 1 960 -
Chr2	stalkie_big_nohaplotig	CDS	82248515	82248676	.	+	0	Parent=comp148125_c0_seq1.mrna1
Chr2	gffcl	locus	82253563	82255617	.	-	.	ID=RLOC_00018980;geneIDs=FBgn0051288.1.path1;transcripts=FBgn0051288.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82253563	82255617	.	-	.	ID=FBgn0051288.1.mrna1;geneID=FBgn0051288.1.path1;Name=FBgn0051288.1;Dir=sensecoverage=100.0;identity=98.6;matches=1325;mismatches=13;indels=6;unknowns=0;locus=RLOC_00018980
Chr2	stalkie_big_nohaplotig	exon	82253563	82253765	99	-	.	Parent=FBgn0051288.1.mrna1;Target=FBgn0051288.1 1142 1344 +
Chr2	stalkie_big_nohaplotig	exon	82254331	82254700	100	-	.	Parent=FBgn0051288.1.mrna1;Target=FBgn0051288.1 772 1141 +
Chr2	stalkie_big_nohaplotig	exon	82254778	82255283	98	-	.	Parent=FBgn0051288.1.mrna1;Target=FBgn0051288.1 266 771 +
Chr2	stalkie_big_nohaplotig	exon	82255359	82255617	96	-	.	Parent=FBgn0051288.1.mrna1;Target=FBgn0051288.1 1 265 +
Chr2	stalkie_big_nohaplotig	CDS	82253563	82253765	.	-	2	Parent=FBgn0051288.1.mrna1;Target=FBgn0051288.1 1142 1344 +
Chr2	stalkie_big_nohaplotig	CDS	82254331	82254700	.	-	0	Parent=FBgn0051288.1.mrna1;Target=FBgn0051288.1 772 1141 +
Chr2	stalkie_big_nohaplotig	CDS	82254778	82255283	.	-	2	Parent=FBgn0051288.1.mrna1;Target=FBgn0051288.1 266 771 +
Chr2	stalkie_big_nohaplotig	CDS	82255359	82255617	.	-	0	Parent=FBgn0051288.1.mrna1;Target=FBgn0051288.1 1 265 +
Chr2	gffcl	locus	82256299	82257854	.	-	.	ID=RLOC_00018981;geneIDs=FBgn0039321.1.path1;transcripts=FBgn0039321.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82256299	82257854	.	-	.	ID=FBgn0039321.1.mrna1;geneID=FBgn0039321.1.path1;Name=FBgn0039321.1;Dir=sensecoverage=99.9;identity=98.9;matches=1275;mismatches=14;indels=0;unknowns=0;locus=RLOC_00018981
Chr2	stalkie_big_nohaplotig	exon	82256299	82256486	97	-	.	Parent=FBgn0039321.1.mrna1;Target=FBgn0039321.1 1103 1290 +
Chr2	stalkie_big_nohaplotig	exon	82256553	82257431	99	-	.	Parent=FBgn0039321.1.mrna1;Target=FBgn0039321.1 224 1102 +
Chr2	stalkie_big_nohaplotig	exon	82257633	82257854	98	-	.	Parent=FBgn0039321.1.mrna1;Target=FBgn0039321.1 2 223 +
Chr2	stalkie_big_nohaplotig	CDS	82256299	82256486	.	-	2	Parent=FBgn0039321.1.mrna1;Target=FBgn0039321.1 1103 1290 +
Chr2	stalkie_big_nohaplotig	CDS	82256553	82257431	.	-	2	Parent=FBgn0039321.1.mrna1;Target=FBgn0039321.1 224 1102 +
Chr2	stalkie_big_nohaplotig	CDS	82257633	82257852	.	-	0	Parent=FBgn0039321.1.mrna1;Target=FBgn0039321.1 4 223 +
Chr2	gffcl	locus	82262062	82263506	.	-	.	ID=RLOC_00018982;geneIDs=FBgn0039321.2.path1;transcripts=FBgn0039321.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82262062	82263506	.	-	.	ID=FBgn0039321.2.mrna1;geneID=FBgn0039321.2.path1;Name=FBgn0039321.2;Dir=sensecoverage=100.0;identity=99.4;matches=1297;mismatches=8;indels=0;unknowns=0;locus=RLOC_00018982
Chr2	stalkie_big_nohaplotig	exon	82262062	82262273	99	-	.	Parent=FBgn0039321.2.mrna1;Target=FBgn0039321.2 1094 1305 +
Chr2	stalkie_big_nohaplotig	exon	82262338	82263207	99	-	.	Parent=FBgn0039321.2.mrna1;Target=FBgn0039321.2 224 1093 +
Chr2	stalkie_big_nohaplotig	exon	82263284	82263506	98	-	.	Parent=FBgn0039321.2.mrna1;Target=FBgn0039321.2 1 223 +
Chr2	stalkie_big_nohaplotig	CDS	82262062	82262273	.	-	2	Parent=FBgn0039321.2.mrna1;Target=FBgn0039321.2 1094 1305 +
Chr2	stalkie_big_nohaplotig	CDS	82262338	82263207	.	-	2	Parent=FBgn0039321.2.mrna1;Target=FBgn0039321.2 224 1093 +
Chr2	stalkie_big_nohaplotig	CDS	82263284	82263506	.	-	0	Parent=FBgn0039321.2.mrna1;Target=FBgn0039321.2 1 223 +
Chr2	gffcl	locus	82273226	82274153	.	-	.	ID=RLOC_00018983;geneIDs=FBgn0051087.1.path1;transcripts=FBgn0051087.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82273226	82274153	.	-	.	ID=FBgn0051087.1.mrna1;geneID=FBgn0051087.1.path1;Name=FBgn0051087.1;Dir=sensecoverage=90.0;identity=90.2;matches=719;mismatches=44;indels=34;unknowns=0;Target=FBgn0051087.1 745 924 +;locus=RLOC_00018983
Chr2	stalkie_big_nohaplotig	exon	82273226	82273410	99	-	.	Parent=FBgn0051087.1.mrna1;Target=FBgn0051087.1 740 924 +
Chr2	stalkie_big_nohaplotig	exon	82273467	82273706	98	-	.	Parent=FBgn0051087.1.mrna1;Target=FBgn0051087.1 500 739 +
Chr2	stalkie_big_nohaplotig	exon	82273789	82274153	80	-	.	Parent=FBgn0051087.1.mrna1;Target=FBgn0051087.1 93 437 +
Chr2	stalkie_big_nohaplotig	CDS	82273226	82273405	.	-	0	Parent=FBgn0051087.1.mrna1
Chr2	gffcl	locus	82281229	82282817	.	-	.	ID=RLOC_00018984;geneIDs=FBgn0039326.2.path1;transcripts=FBgn0039326.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82281229	82282817	.	-	.	ID=FBgn0039326.2.mrna1;geneID=FBgn0039326.2.path1;Name=FBgn0039326.2;Dir=sensecoverage=100.0;identity=99.1;matches=1180;mismatches=10;indels=1;unknowns=0;locus=RLOC_00018984
Chr2	stalkie_big_nohaplotig	exon	82281229	82281307	98	-	.	Parent=FBgn0039326.2.mrna1;Target=FBgn0039326.2 1112 1191 +
Chr2	stalkie_big_nohaplotig	exon	82281364	82281730	99	-	.	Parent=FBgn0039326.2.mrna1;Target=FBgn0039326.2 745 1111 +
Chr2	stalkie_big_nohaplotig	exon	82281992	82282482	98	-	.	Parent=FBgn0039326.2.mrna1;Target=FBgn0039326.2 254 744 +
Chr2	stalkie_big_nohaplotig	exon	82282565	82282817	99	-	.	Parent=FBgn0039326.2.mrna1;Target=FBgn0039326.2 1 253 +
Chr2	stalkie_big_nohaplotig	CDS	82281229	82281307	.	-	2	Parent=FBgn0039326.2.mrna1;Target=FBgn0039326.2 1112 1191 +
Chr2	stalkie_big_nohaplotig	CDS	82281364	82281730	.	-	0	Parent=FBgn0039326.2.mrna1;Target=FBgn0039326.2 745 1111 +
Chr2	stalkie_big_nohaplotig	CDS	82281992	82282482	.	-	2	Parent=FBgn0039326.2.mrna1;Target=FBgn0039326.2 254 744 +
Chr2	stalkie_big_nohaplotig	CDS	82282565	82282817	.	-	0	Parent=FBgn0039326.2.mrna1;Target=FBgn0039326.2 1 253 +
Chr2	gffcl	locus	82286181	82288205	.	-	.	ID=RLOC_00018985;geneIDs=FBgn0039326.4.path1;transcripts=FBgn0039326.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82286181	82288205	.	-	.	ID=FBgn0039326.4.mrna1;geneID=FBgn0039326.4.path1;Name=FBgn0039326.4;Dir=sensecoverage=100.0;identity=99.0;matches=1238;mismatches=13;indels=0;unknowns=0;locus=RLOC_00018985
Chr2	stalkie_big_nohaplotig	exon	82286181	82286371	100	-	.	Parent=FBgn0039326.4.mrna1;Target=FBgn0039326.4 1061 1251 +
Chr2	stalkie_big_nohaplotig	exon	82286479	82286845	98	-	.	Parent=FBgn0039326.4.mrna1;Target=FBgn0039326.4 694 1060 +
Chr2	stalkie_big_nohaplotig	exon	82287444	82287934	99	-	.	Parent=FBgn0039326.4.mrna1;Target=FBgn0039326.4 203 693 +
Chr2	stalkie_big_nohaplotig	exon	82288004	82288205	98	-	.	Parent=FBgn0039326.4.mrna1;Target=FBgn0039326.4 1 202 +
Chr2	stalkie_big_nohaplotig	CDS	82286181	82286371	.	-	2	Parent=FBgn0039326.4.mrna1;Target=FBgn0039326.4 1061 1251 +
Chr2	stalkie_big_nohaplotig	CDS	82286479	82286845	.	-	0	Parent=FBgn0039326.4.mrna1;Target=FBgn0039326.4 694 1060 +
Chr2	stalkie_big_nohaplotig	CDS	82287444	82287934	.	-	2	Parent=FBgn0039326.4.mrna1;Target=FBgn0039326.4 203 693 +
Chr2	stalkie_big_nohaplotig	CDS	82288004	82288205	.	-	0	Parent=FBgn0039326.4.mrna1;Target=FBgn0039326.4 1 202 +
Chr2	gffcl	locus	82290047	82293012	.	-	.	ID=RLOC_00018986;geneIDs=FBgn0039326.5.path1;transcripts=FBgn0039326.5.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82290047	82293012	.	-	.	ID=FBgn0039326.5.mrna1;geneID=FBgn0039326.5.path1;Name=FBgn0039326.5;Dir=sensecoverage=100.0;identity=99.4;matches=1249;mismatches=8;indels=0;unknowns=0;locus=RLOC_00018986
Chr2	stalkie_big_nohaplotig	exon	82290047	82290237	99	-	.	Parent=FBgn0039326.5.mrna1;Target=FBgn0039326.5 1067 1257 +
Chr2	stalkie_big_nohaplotig	exon	82291792	82292158	99	-	.	Parent=FBgn0039326.5.mrna1;Target=FBgn0039326.5 700 1066 +
Chr2	stalkie_big_nohaplotig	exon	82292218	82292714	98	-	.	Parent=FBgn0039326.5.mrna1;Target=FBgn0039326.5 203 699 +
Chr2	stalkie_big_nohaplotig	exon	82292811	82293012	99	-	.	Parent=FBgn0039326.5.mrna1;Target=FBgn0039326.5 1 202 +
Chr2	stalkie_big_nohaplotig	CDS	82290047	82290237	.	-	2	Parent=FBgn0039326.5.mrna1;Target=FBgn0039326.5 1067 1257 +
Chr2	stalkie_big_nohaplotig	CDS	82291792	82292158	.	-	0	Parent=FBgn0039326.5.mrna1;Target=FBgn0039326.5 700 1066 +
Chr2	stalkie_big_nohaplotig	CDS	82292218	82292714	.	-	2	Parent=FBgn0039326.5.mrna1;Target=FBgn0039326.5 203 699 +
Chr2	stalkie_big_nohaplotig	CDS	82292811	82293012	.	-	0	Parent=FBgn0039326.5.mrna1;Target=FBgn0039326.5 1 202 +
Chr2	gffcl	locus	82293768	82295246	.	-	.	ID=RLOC_00018987;geneIDs=FBgn0039326.1.path1;transcripts=FBgn0039326.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82293768	82295246	.	-	.	ID=FBgn0039326.1.mrna1;geneID=FBgn0039326.1.path1;Name=FBgn0039326.1;Dir=sensecoverage=100.0;identity=99.8;matches=1297;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018987
Chr2	stalkie_big_nohaplotig	exon	82293768	82293958	98	-	.	Parent=FBgn0039326.1.mrna1;Target=FBgn0039326.1 1109 1299 +
Chr2	stalkie_big_nohaplotig	exon	82294014	82294380	100	-	.	Parent=FBgn0039326.1.mrna1;Target=FBgn0039326.1 742 1108 +
Chr2	stalkie_big_nohaplotig	exon	82294442	82294935	100	-	.	Parent=FBgn0039326.1.mrna1;Target=FBgn0039326.1 248 741 +
Chr2	stalkie_big_nohaplotig	exon	82295000	82295246	100	-	.	Parent=FBgn0039326.1.mrna1;Target=FBgn0039326.1 1 247 +
Chr2	stalkie_big_nohaplotig	CDS	82293768	82293958	.	-	2	Parent=FBgn0039326.1.mrna1;Target=FBgn0039326.1 1109 1299 +
Chr2	stalkie_big_nohaplotig	CDS	82294014	82294380	.	-	0	Parent=FBgn0039326.1.mrna1;Target=FBgn0039326.1 742 1108 +
Chr2	stalkie_big_nohaplotig	CDS	82294442	82294935	.	-	2	Parent=FBgn0039326.1.mrna1;Target=FBgn0039326.1 248 741 +
Chr2	stalkie_big_nohaplotig	CDS	82295000	82295246	.	-	0	Parent=FBgn0039326.1.mrna1;Target=FBgn0039326.1 1 247 +
Chr2	gffcl	locus	82299339	82300835	.	+	.	ID=RLOC_00018988;geneIDs=FBgn0039326.3.path1;transcripts=FBgn0039326.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82299339	82300835	.	+	.	ID=FBgn0039326.3.mrna1;geneID=FBgn0039326.3.path1;Name=FBgn0039326.3;Dir=sensecoverage=100.0;identity=99.6;matches=1294;mismatches=5;indels=0;unknowns=0;locus=RLOC_00018988
Chr2	stalkie_big_nohaplotig	exon	82299339	82299594	99	+	.	Parent=FBgn0039326.3.mrna1;Target=FBgn0039326.3 1 256 +
Chr2	stalkie_big_nohaplotig	exon	82299662	82300149	99	+	.	Parent=FBgn0039326.3.mrna1;Target=FBgn0039326.3 257 744 +
Chr2	stalkie_big_nohaplotig	exon	82300216	82300582	99	+	.	Parent=FBgn0039326.3.mrna1;Target=FBgn0039326.3 745 1111 +
Chr2	stalkie_big_nohaplotig	exon	82300648	82300835	99	+	.	Parent=FBgn0039326.3.mrna1;Target=FBgn0039326.3 1112 1299 +
Chr2	stalkie_big_nohaplotig	CDS	82299339	82299594	.	+	0	Parent=FBgn0039326.3.mrna1;Target=FBgn0039326.3 1 256 +
Chr2	stalkie_big_nohaplotig	CDS	82299662	82300149	.	+	2	Parent=FBgn0039326.3.mrna1;Target=FBgn0039326.3 257 744 +
Chr2	stalkie_big_nohaplotig	CDS	82300216	82300582	.	+	0	Parent=FBgn0039326.3.mrna1;Target=FBgn0039326.3 745 1111 +
Chr2	stalkie_big_nohaplotig	CDS	82300648	82300835	.	+	2	Parent=FBgn0039326.3.mrna1;Target=FBgn0039326.3 1112 1299 +
Chr2	gffcl	locus	82302931	82314843	.	-	.	ID=RLOC_00018989;geneIDs=FBgn0037935.1.path1;transcripts=FBgn0037935.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82302931	82314843	.	-	.	ID=FBgn0037935.1.mrna1;geneID=FBgn0037935.1.path1;Name=FBgn0037935.1;Dir=sensecoverage=99.1;identity=99.4;matches=3835;mismatches=23;indels=0;unknowns=0;locus=RLOC_00018989
Chr2	stalkie_big_nohaplotig	exon	82302931	82303243	99	-	.	Parent=FBgn0037935.1.mrna1;Target=FBgn0037935.1 3547 3859 +
Chr2	stalkie_big_nohaplotig	exon	82303508	82303998	99	-	.	Parent=FBgn0037935.1.mrna1;Target=FBgn0037935.1 3056 3546 +
Chr2	stalkie_big_nohaplotig	exon	82304241	82304515	98	-	.	Parent=FBgn0037935.1.mrna1;Target=FBgn0037935.1 2781 3055 +
Chr2	stalkie_big_nohaplotig	exon	82305973	82306165	100	-	.	Parent=FBgn0037935.1.mrna1;Target=FBgn0037935.1 2588 2780 +
Chr2	stalkie_big_nohaplotig	exon	82306230	82306596	100	-	.	Parent=FBgn0037935.1.mrna1;Target=FBgn0037935.1 2221 2587 +
Chr2	stalkie_big_nohaplotig	exon	82306683	82307179	100	-	.	Parent=FBgn0037935.1.mrna1;Target=FBgn0037935.1 1724 2220 +
Chr2	stalkie_big_nohaplotig	exon	82307238	82307518	100	-	.	Parent=FBgn0037935.1.mrna1;Target=FBgn0037935.1 1443 1723 +
Chr2	stalkie_big_nohaplotig	exon	82307609	82308168	100	-	.	Parent=FBgn0037935.1.mrna1;Target=FBgn0037935.1 883 1442 +
Chr2	stalkie_big_nohaplotig	exon	82308362	82308819	98	-	.	Parent=FBgn0037935.1.mrna1;Target=FBgn0037935.1 425 882 +
Chr2	stalkie_big_nohaplotig	exon	82314306	82314341	100	-	.	Parent=FBgn0037935.1.mrna1;Target=FBgn0037935.1 389 424 +
Chr2	stalkie_big_nohaplotig	exon	82314457	82314843	98	-	.	Parent=FBgn0037935.1.mrna1;Target=FBgn0037935.1 2 388 +
Chr2	stalkie_big_nohaplotig	CDS	82302932	82303243	.	-	0	Parent=FBgn0037935.1.mrna1;Target=FBgn0037935.1 3547 3858 +
Chr2	stalkie_big_nohaplotig	CDS	82303508	82303998	.	-	2	Parent=FBgn0037935.1.mrna1;Target=FBgn0037935.1 3056 3546 +
Chr2	stalkie_big_nohaplotig	CDS	82304241	82304515	.	-	1	Parent=FBgn0037935.1.mrna1;Target=FBgn0037935.1 2781 3055 +
Chr2	stalkie_big_nohaplotig	CDS	82305973	82306165	.	-	2	Parent=FBgn0037935.1.mrna1;Target=FBgn0037935.1 2588 2780 +
Chr2	stalkie_big_nohaplotig	CDS	82306230	82306596	.	-	0	Parent=FBgn0037935.1.mrna1;Target=FBgn0037935.1 2221 2587 +
Chr2	stalkie_big_nohaplotig	CDS	82306683	82307179	.	-	2	Parent=FBgn0037935.1.mrna1;Target=FBgn0037935.1 1724 2220 +
Chr2	stalkie_big_nohaplotig	CDS	82307238	82307518	.	-	1	Parent=FBgn0037935.1.mrna1;Target=FBgn0037935.1 1443 1723 +
Chr2	stalkie_big_nohaplotig	CDS	82307609	82308168	.	-	0	Parent=FBgn0037935.1.mrna1;Target=FBgn0037935.1 883 1442 +
Chr2	stalkie_big_nohaplotig	CDS	82308362	82308819	.	-	2	Parent=FBgn0037935.1.mrna1;Target=FBgn0037935.1 425 882 +
Chr2	stalkie_big_nohaplotig	CDS	82314306	82314341	.	-	2	Parent=FBgn0037935.1.mrna1;Target=FBgn0037935.1 389 424 +
Chr2	stalkie_big_nohaplotig	CDS	82314457	82314841	.	-	0	Parent=FBgn0037935.1.mrna1;Target=FBgn0037935.1 4 388 +
Chr2	gffcl	locus	82317663	82320509	.	-	.	ID=RLOC_00018990;geneIDs=FBgn0037936.1.path1;transcripts=FBgn0037936.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82317663	82320509	.	-	.	ID=FBgn0037936.1.mrna1;geneID=FBgn0037936.1.path1;Name=FBgn0037936.1;Dir=sensecoverage=100.0;identity=99.5;matches=1281;mismatches=6;indels=0;unknowns=0;locus=RLOC_00018990
Chr2	stalkie_big_nohaplotig	exon	82317663	82317871	99	-	.	Parent=FBgn0037936.1.mrna1;Target=FBgn0037936.1 1079 1287 +
Chr2	stalkie_big_nohaplotig	exon	82317973	82318339	99	-	.	Parent=FBgn0037936.1.mrna1;Target=FBgn0037936.1 712 1078 +
Chr2	stalkie_big_nohaplotig	exon	82318415	82318902	99	-	.	Parent=FBgn0037936.1.mrna1;Target=FBgn0037936.1 224 711 +
Chr2	stalkie_big_nohaplotig	exon	82320287	82320509	100	-	.	Parent=FBgn0037936.1.mrna1;Target=FBgn0037936.1 1 223 +
Chr2	stalkie_big_nohaplotig	CDS	82317663	82317871	.	-	2	Parent=FBgn0037936.1.mrna1;Target=FBgn0037936.1 1079 1287 +
Chr2	stalkie_big_nohaplotig	CDS	82317973	82318339	.	-	0	Parent=FBgn0037936.1.mrna1;Target=FBgn0037936.1 712 1078 +
Chr2	stalkie_big_nohaplotig	CDS	82318415	82318902	.	-	2	Parent=FBgn0037936.1.mrna1;Target=FBgn0037936.1 224 711 +
Chr2	stalkie_big_nohaplotig	CDS	82320287	82320509	.	-	0	Parent=FBgn0037936.1.mrna1;Target=FBgn0037936.1 1 223 +
Chr2	gffcl	locus	82350233	82351512	.	+	.	ID=RLOC_00018991;geneIDs=FBgn0037834.1.path1;transcripts=FBgn0037834.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82350233	82351512	.	+	.	ID=FBgn0037834.1.mrna1;geneID=FBgn0037834.1.path1;Name=FBgn0037834.1;Dir=sensecoverage=100.0;identity=99.8;matches=1225;mismatches=2;indels=0;unknowns=0;locus=RLOC_00018991
Chr2	stalkie_big_nohaplotig	exon	82350233	82350862	100	+	.	Parent=FBgn0037834.1.mrna1;Target=FBgn0037834.1 1 630 +
Chr2	stalkie_big_nohaplotig	exon	82350916	82351512	99	+	.	Parent=FBgn0037834.1.mrna1;Target=FBgn0037834.1 631 1227 +
Chr2	stalkie_big_nohaplotig	CDS	82350233	82350862	.	+	0	Parent=FBgn0037834.1.mrna1;Target=FBgn0037834.1 1 630 +
Chr2	stalkie_big_nohaplotig	CDS	82350916	82351512	.	+	0	Parent=FBgn0037834.1.mrna1;Target=FBgn0037834.1 631 1227 +
Chr2	gffcl	locus	82439395	82456049	.	-	.	ID=RLOC_00018993;geneIDs=FBgn0037726.path1;transcripts=FBgn0037726.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82439395	82456049	.	-	.	ID=FBgn0037726.mrna1;geneID=FBgn0037726.path1;Name=FBgn0037726;Dir=sensecoverage=100.0;identity=99.7;matches=1851;mismatches=6;indels=0;unknowns=0;locus=RLOC_00018993
Chr2	stalkie_big_nohaplotig	exon	82439395	82439807	99	-	.	Parent=FBgn0037726.mrna1;Target=FBgn0037726 1445 1857 +
Chr2	stalkie_big_nohaplotig	exon	82440951	82441184	100	-	.	Parent=FBgn0037726.mrna1;Target=FBgn0037726 1211 1444 +
Chr2	stalkie_big_nohaplotig	exon	82441243	82441828	99	-	.	Parent=FBgn0037726.mrna1;Target=FBgn0037726 625 1210 +
Chr2	stalkie_big_nohaplotig	exon	82442067	82442453	100	-	.	Parent=FBgn0037726.mrna1;Target=FBgn0037726 238 624 +
Chr2	stalkie_big_nohaplotig	exon	82455604	82455814	99	-	.	Parent=FBgn0037726.mrna1;Target=FBgn0037726 27 237 +
Chr2	stalkie_big_nohaplotig	exon	82456024	82456049	100	-	.	Parent=FBgn0037726.mrna1;Target=FBgn0037726 1 26 +
Chr2	stalkie_big_nohaplotig	CDS	82439395	82439807	.	-	2	Parent=FBgn0037726.mrna1;Target=FBgn0037726 1445 1857 +
Chr2	stalkie_big_nohaplotig	CDS	82440951	82441184	.	-	2	Parent=FBgn0037726.mrna1;Target=FBgn0037726 1211 1444 +
Chr2	stalkie_big_nohaplotig	CDS	82441243	82441828	.	-	0	Parent=FBgn0037726.mrna1;Target=FBgn0037726 625 1210 +
Chr2	stalkie_big_nohaplotig	CDS	82442067	82442453	.	-	0	Parent=FBgn0037726.mrna1;Target=FBgn0037726 238 624 +
Chr2	stalkie_big_nohaplotig	CDS	82455604	82455814	.	-	1	Parent=FBgn0037726.mrna1;Target=FBgn0037726 27 237 +
Chr2	stalkie_big_nohaplotig	CDS	82456024	82456049	.	-	0	Parent=FBgn0037726.mrna1;Target=FBgn0037726 1 26 +
Chr2	gffcl	locus	82499686	82501074	.	-	.	ID=RLOC_00018994;geneIDs=comp144169_c0_seq1.path1;transcripts=comp144169_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82499686	82501074	.	-	.	ID=comp144169_c0_seq1.mrna1;geneID=comp144169_c0_seq1.path1;Name=comp144169_c0_seq1;Dir=sensecoverage=98.4;identity=98.5;matches=844;mismatches=12;indels=1;unknowns=0;locus=RLOC_00018994
Chr2	stalkie_big_nohaplotig	exon	82499686	82500031	100	-	.	Parent=comp144169_c0_seq1.mrna1;Target=comp144169_c0_seq1 512 857 +
Chr2	stalkie_big_nohaplotig	exon	82500096	82500152	98	-	.	Parent=comp144169_c0_seq1.mrna1;Target=comp144169_c0_seq1 455 511 +
Chr2	stalkie_big_nohaplotig	exon	82500223	82500455	98	-	.	Parent=comp144169_c0_seq1.mrna1;Target=comp144169_c0_seq1 222 454 +
Chr2	stalkie_big_nohaplotig	exon	82500855	82501074	96	-	.	Parent=comp144169_c0_seq1.mrna1;Target=comp144169_c0_seq1 1 221 +
Chr2	stalkie_big_nohaplotig	CDS	82499786	82500031	.	-	0	Parent=comp144169_c0_seq1.mrna1;Target=comp144169_c0_seq1 512 757 +
Chr2	stalkie_big_nohaplotig	CDS	82500096	82500152	.	-	0	Parent=comp144169_c0_seq1.mrna1;Target=comp144169_c0_seq1 455 511 +
Chr2	gffcl	locus	82518545	82521921	.	+	.	ID=RLOC_00018995;geneIDs=FBgn0038330.1.path1,comp161298_c1_seq1.path1;transcripts=comp161298_c1_seq1.mrna1,FBgn0038330.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82518545	82521921	.	+	.	ID=comp161298_c1_seq1.mrna1;geneID=comp161298_c1_seq1.path1;Name=comp161298_c1_seq1;Dir=sensecoverage=76.8;identity=99.6;matches=2300;mismatches=6;indels=3;unknowns=0;locus=RLOC_00018995
Chr2	stalkie_big_nohaplotig	exon	82518545	82519363	99	+	.	Parent=comp161298_c1_seq1.mrna1;Target=comp161298_c1_seq1 657 1475 +
Chr2	stalkie_big_nohaplotig	exon	82519424	82519567	99	+	.	Parent=comp161298_c1_seq1.mrna1;Target=comp161298_c1_seq1 1476 1619 +
Chr2	stalkie_big_nohaplotig	exon	82519625	82519732	100	+	.	Parent=comp161298_c1_seq1.mrna1;Target=comp161298_c1_seq1 1620 1727 +
Chr2	stalkie_big_nohaplotig	exon	82520607	82520745	100	+	.	Parent=comp161298_c1_seq1.mrna1;Target=comp161298_c1_seq1 1728 1866 +
Chr2	stalkie_big_nohaplotig	exon	82520823	82521921	99	+	.	Parent=comp161298_c1_seq1.mrna1;Target=comp161298_c1_seq1 1867 2962 +
Chr2	stalkie_big_nohaplotig	CDS	82518815	82519363	.	+	0	Parent=comp161298_c1_seq1.mrna1;Target=comp161298_c1_seq1 927 1475 +
Chr2	stalkie_big_nohaplotig	CDS	82519424	82519567	.	+	0	Parent=comp161298_c1_seq1.mrna1;Target=comp161298_c1_seq1 1476 1619 +
Chr2	stalkie_big_nohaplotig	CDS	82519625	82519732	.	+	0	Parent=comp161298_c1_seq1.mrna1;Target=comp161298_c1_seq1 1620 1727 +
Chr2	stalkie_big_nohaplotig	CDS	82520607	82520609	.	+	0	Parent=comp161298_c1_seq1.mrna1;Target=comp161298_c1_seq1 1728 1730 +
Chr2	stalkie_big_nohaplotig	mRNA	82518812	82521516	.	+	.	ID=FBgn0038330.1.mrna1;geneID=FBgn0038330.1.path1;Name=FBgn0038330.1;Dir=sensecoverage=100.0;identity=99.7;matches=1632;mismatches=5;indels=0;unknowns=1;locus=RLOC_00018995
Chr2	stalkie_big_nohaplotig	exon	82518812	82519363	99	+	.	Parent=FBgn0038330.1.mrna1;Target=FBgn0038330.1 1 552 +
Chr2	stalkie_big_nohaplotig	exon	82519424	82519567	99	+	.	Parent=FBgn0038330.1.mrna1;Target=FBgn0038330.1 553 696 +
Chr2	stalkie_big_nohaplotig	exon	82519625	82519732	100	+	.	Parent=FBgn0038330.1.mrna1;Target=FBgn0038330.1 697 804 +
Chr2	stalkie_big_nohaplotig	exon	82520606	82520745	100	+	.	Parent=FBgn0038330.1.mrna1;Target=FBgn0038330.1 805 944 +
Chr2	stalkie_big_nohaplotig	exon	82520823	82521516	100	+	.	Parent=FBgn0038330.1.mrna1;Target=FBgn0038330.1 945 1638 +
Chr2	stalkie_big_nohaplotig	CDS	82518812	82519363	.	+	0	Parent=FBgn0038330.1.mrna1;Target=FBgn0038330.1 1 552 +
Chr2	stalkie_big_nohaplotig	CDS	82519424	82519567	.	+	0	Parent=FBgn0038330.1.mrna1;Target=FBgn0038330.1 553 696 +
Chr2	stalkie_big_nohaplotig	CDS	82519625	82519732	.	+	0	Parent=FBgn0038330.1.mrna1;Target=FBgn0038330.1 697 804 +
Chr2	stalkie_big_nohaplotig	CDS	82520606	82520745	.	+	0	Parent=FBgn0038330.1.mrna1;Target=FBgn0038330.1 805 944 +
Chr2	stalkie_big_nohaplotig	CDS	82520823	82521516	.	+	1	Parent=FBgn0038330.1.mrna1;Target=FBgn0038330.1 945 1638 +
Chr2	gffcl	locus	82522242	82523879	.	-	.	ID=RLOC_00018996;geneIDs=comp155805_c0_seq1.path1;transcripts=comp155805_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82522242	82523879	.	-	.	ID=comp155805_c0_seq1.mrna1;geneID=comp155805_c0_seq1.path1;Name=comp155805_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1626;mismatches=12;indels=0;unknowns=0;Target=comp155805_c0_seq1 1638 1 .;CDS_Target=comp155805_c0_seq1 1637 1464 .;locus=RLOC_00018996
Chr2	stalkie_big_nohaplotig	exon	82522242	82523879	99	-	.	Parent=comp155805_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	82522243	82522416	.	-	0	Parent=comp155805_c0_seq1.mrna1
Chr2	gffcl	locus	82531900	82533600	.	.	.	ID=RLOC_00018998;geneIDs=FBgn0085326.1.path1,comp114735_c1_seq1.path2;transcripts=FBgn0085326.1.mrna1,comp114735_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	82531900	82533600	.	+	.	ID=FBgn0085326.1.mrna1;geneID=FBgn0085326.1.path1;Name=FBgn0085326.1;Dir=sensecoverage=100.0;identity=99.6;matches=690;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018998
Chr2	stalkie_big_nohaplotig	exon	82531900	82532036	99	+	.	Parent=FBgn0085326.1.mrna1;Target=FBgn0085326.1 1 137 +
Chr2	stalkie_big_nohaplotig	exon	82532105	82532320	99	+	.	Parent=FBgn0085326.1.mrna1;Target=FBgn0085326.1 138 353 +
Chr2	stalkie_big_nohaplotig	exon	82533134	82533256	99	+	.	Parent=FBgn0085326.1.mrna1;Target=FBgn0085326.1 354 476 +
Chr2	stalkie_big_nohaplotig	exon	82533384	82533600	100	+	.	Parent=FBgn0085326.1.mrna1;Target=FBgn0085326.1 477 693 +
Chr2	stalkie_big_nohaplotig	CDS	82531900	82532036	.	+	0	Parent=FBgn0085326.1.mrna1;Target=FBgn0085326.1 1 137 +
Chr2	stalkie_big_nohaplotig	CDS	82532105	82532320	.	+	1	Parent=FBgn0085326.1.mrna1;Target=FBgn0085326.1 138 353 +
Chr2	stalkie_big_nohaplotig	CDS	82533134	82533256	.	+	1	Parent=FBgn0085326.1.mrna1;Target=FBgn0085326.1 354 476 +
Chr2	stalkie_big_nohaplotig	CDS	82533384	82533600	.	+	1	Parent=FBgn0085326.1.mrna1;Target=FBgn0085326.1 477 693 +
Chr2	stalkie_big_nohaplotig	mRNA	82532017	82532082	.	-	.	ID=comp114735_c1_seq1.mrna2;geneID=comp114735_c1_seq1.path2;Name=comp114735_c1_seq1;Dir=indeterminatecoverage=11.8;identity=100.0;matches=66;mismatches=0;indels=0;unknowns=0;Target=comp114735_c1_seq1 559 494 .;locus=RLOC_00018998
Chr2	stalkie_big_nohaplotig	exon	82532017	82532082	100	-	.	Parent=comp114735_c1_seq1.mrna2
Chr2	gffcl	locus	82562274	82564417	.	+	.	ID=RLOC_00018999;geneIDs=FBgn0027617.1.path1;transcripts=FBgn0027617.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82562274	82564417	.	+	.	ID=FBgn0027617.1.mrna1;geneID=FBgn0027617.1.path1;Name=FBgn0027617.1;Dir=sensecoverage=100.0;identity=99.9;matches=2082;mismatches=3;indels=0;unknowns=0;locus=RLOC_00018999
Chr2	stalkie_big_nohaplotig	exon	82562274	82562694	100	+	.	Parent=FBgn0027617.1.mrna1;Target=FBgn0027617.1 1 421 +
Chr2	stalkie_big_nohaplotig	exon	82562754	82564417	99	+	.	Parent=FBgn0027617.1.mrna1;Target=FBgn0027617.1 422 2085 +
Chr2	stalkie_big_nohaplotig	CDS	82562274	82562694	.	+	0	Parent=FBgn0027617.1.mrna1;Target=FBgn0027617.1 1 421 +
Chr2	stalkie_big_nohaplotig	CDS	82562754	82564417	.	+	2	Parent=FBgn0027617.1.mrna1;Target=FBgn0027617.1 422 2085 +
Chr2	gffcl	locus	82567206	82567761	.	-	.	ID=RLOC_00019000;geneIDs=Dv_FBgn0205474.1.path1;transcripts=Dv_FBgn0205474.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82567206	82567761	.	-	.	ID=Dv_FBgn0205474.1.mrna1;geneID=Dv_FBgn0205474.1.path1;Name=Dv_FBgn0205474.1;Dir=sensecoverage=100.0;identity=100.0;matches=333;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019000
Chr2	stalkie_big_nohaplotig	exon	82567206	82567364	100	-	.	Parent=Dv_FBgn0205474.1.mrna1;Target=Dv_FBgn0205474.1 175 333 +
Chr2	stalkie_big_nohaplotig	exon	82567423	82567569	100	-	.	Parent=Dv_FBgn0205474.1.mrna1;Target=Dv_FBgn0205474.1 28 174 +
Chr2	stalkie_big_nohaplotig	exon	82567735	82567761	100	-	.	Parent=Dv_FBgn0205474.1.mrna1;Target=Dv_FBgn0205474.1 1 27 +
Chr2	stalkie_big_nohaplotig	CDS	82567206	82567364	.	-	0	Parent=Dv_FBgn0205474.1.mrna1;Target=Dv_FBgn0205474.1 175 333 +
Chr2	stalkie_big_nohaplotig	CDS	82567423	82567569	.	-	0	Parent=Dv_FBgn0205474.1.mrna1;Target=Dv_FBgn0205474.1 28 174 +
Chr2	stalkie_big_nohaplotig	CDS	82567735	82567761	.	-	0	Parent=Dv_FBgn0205474.1.mrna1;Target=Dv_FBgn0205474.1 1 27 +
Chr2	gffcl	locus	82571270	82571322	.	+	.	ID=RLOC_00019001;geneIDs=comp135082_c0_seq1.path2;transcripts=comp135082_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	82571270	82571322	.	+	.	ID=comp135082_c0_seq1.mrna2;geneID=comp135082_c0_seq1.path2;Name=comp135082_c0_seq1;Dir=indeterminatecoverage=8.0;identity=100.0;matches=53;mismatches=0;indels=0;unknowns=0;Target=comp135082_c0_seq1 665 613 .;CDS_Target=comp135082_c0_seq1 664 613 .;locus=RLOC_00019001
Chr2	stalkie_big_nohaplotig	exon	82571270	82571322	100	+	.	Parent=comp135082_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	82571270	82571321	.	+	2	Parent=comp135082_c0_seq1.mrna2
Chr2	gffcl	locus	82576930	82577329	.	+	.	ID=RLOC_00019002;geneIDs=comp119096_c0_seq1.path1;transcripts=comp119096_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82576930	82577329	.	+	.	ID=comp119096_c0_seq1.mrna1;geneID=comp119096_c0_seq1.path1;Name=comp119096_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=400;mismatches=0;indels=0;unknowns=0;Target=comp119096_c0_seq1 400 1 .;CDS_Target=comp119096_c0_seq1 112 26 .;locus=RLOC_00019002
Chr2	stalkie_big_nohaplotig	exon	82576930	82577329	100	+	.	Parent=comp119096_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	82576955	82577041	.	+	0	Parent=comp119096_c0_seq1.mrna1
Chr2	gffcl	locus	82609464	82610431	.	-	.	ID=RLOC_00019003;geneIDs=comp143190_c0_seq1.path1;transcripts=comp143190_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82609464	82610431	.	-	.	ID=comp143190_c0_seq1.mrna1;geneID=comp143190_c0_seq1.path1;Name=comp143190_c0_seq1;Dir=sensecoverage=94.9;identity=99.4;matches=789;mismatches=4;indels=1;unknowns=0;locus=RLOC_00019003
Chr2	stalkie_big_nohaplotig	exon	82609464	82609786	99	-	.	Parent=comp143190_c0_seq1.mrna1;Target=comp143190_c0_seq1 500 822 +
Chr2	stalkie_big_nohaplotig	exon	82609844	82609925	100	-	.	Parent=comp143190_c0_seq1.mrna1;Target=comp143190_c0_seq1 418 499 +
Chr2	stalkie_big_nohaplotig	exon	82609987	82610130	97	-	.	Parent=comp143190_c0_seq1.mrna1;Target=comp143190_c0_seq1 273 417 +
Chr2	stalkie_big_nohaplotig	exon	82610188	82610431	100	-	.	Parent=comp143190_c0_seq1.mrna1;Target=comp143190_c0_seq1 29 272 +
Chr2	stalkie_big_nohaplotig	CDS	82610024	82610130	.	-	0	Parent=comp143190_c0_seq1.mrna1;Target=comp143190_c0_seq1 273 380 +
Chr2	stalkie_big_nohaplotig	CDS	82610188	82610205	.	-	0	Parent=comp143190_c0_seq1.mrna1;Target=comp143190_c0_seq1 255 272 +
Chr2	gffcl	locus	82612247	82612802	.	-	.	ID=RLOC_00019004;geneIDs=Dv_FBgn0205474.1.path2;transcripts=Dv_FBgn0205474.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	82612247	82612802	.	-	.	ID=Dv_FBgn0205474.1.mrna2;geneID=Dv_FBgn0205474.1.path2;Name=Dv_FBgn0205474.1;Dir=sensecoverage=100.0;identity=100.0;matches=333;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019004
Chr2	stalkie_big_nohaplotig	exon	82612247	82612405	100	-	.	Parent=Dv_FBgn0205474.1.mrna2;Target=Dv_FBgn0205474.1 175 333 +
Chr2	stalkie_big_nohaplotig	exon	82612464	82612610	100	-	.	Parent=Dv_FBgn0205474.1.mrna2;Target=Dv_FBgn0205474.1 28 174 +
Chr2	stalkie_big_nohaplotig	exon	82612776	82612802	100	-	.	Parent=Dv_FBgn0205474.1.mrna2;Target=Dv_FBgn0205474.1 1 27 +
Chr2	stalkie_big_nohaplotig	CDS	82612247	82612405	.	-	0	Parent=Dv_FBgn0205474.1.mrna2;Target=Dv_FBgn0205474.1 175 333 +
Chr2	stalkie_big_nohaplotig	CDS	82612464	82612610	.	-	0	Parent=Dv_FBgn0205474.1.mrna2;Target=Dv_FBgn0205474.1 28 174 +
Chr2	stalkie_big_nohaplotig	CDS	82612776	82612802	.	-	0	Parent=Dv_FBgn0205474.1.mrna2;Target=Dv_FBgn0205474.1 1 27 +
Chr2	gffcl	locus	82615060	82615339	.	-	.	ID=RLOC_00019005;geneIDs=comp153740_c0_seq1.path1;transcripts=comp153740_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82615060	82615339	.	-	.	ID=comp153740_c0_seq1.mrna1;geneID=comp153740_c0_seq1.path1;Name=comp153740_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=275;mismatches=5;indels=0;unknowns=0;Target=comp153740_c0_seq1 280 1 .;CDS_Target=comp153740_c0_seq1 45 1 .;locus=RLOC_00019005
Chr2	stalkie_big_nohaplotig	exon	82615060	82615339	98	-	.	Parent=comp153740_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	82615295	82615339	.	-	0	Parent=comp153740_c0_seq1.mrna1
Chr2	gffcl	locus	82615724	82624109	.	-	.	ID=RLOC_00019006;geneIDs=FBgn0029752.1.path1;transcripts=FBgn0029752.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82615724	82624109	.	-	.	ID=FBgn0029752.1.mrna1;geneID=FBgn0029752.1.path1;Name=FBgn0029752.1;Dir=sensecoverage=100.0;identity=100.0;matches=324;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019006
Chr2	stalkie_big_nohaplotig	exon	82615724	82615870	100	-	.	Parent=FBgn0029752.1.mrna1;Target=FBgn0029752.1 178 324 +
Chr2	stalkie_big_nohaplotig	exon	82617326	82617472	100	-	.	Parent=FBgn0029752.1.mrna1;Target=FBgn0029752.1 31 177 +
Chr2	stalkie_big_nohaplotig	exon	82624080	82624109	100	-	.	Parent=FBgn0029752.1.mrna1;Target=FBgn0029752.1 1 30 +
Chr2	stalkie_big_nohaplotig	CDS	82615724	82615870	.	-	0	Parent=FBgn0029752.1.mrna1;Target=FBgn0029752.1 178 324 +
Chr2	stalkie_big_nohaplotig	CDS	82617326	82617472	.	-	0	Parent=FBgn0029752.1.mrna1;Target=FBgn0029752.1 31 177 +
Chr2	stalkie_big_nohaplotig	CDS	82624080	82624109	.	-	0	Parent=FBgn0029752.1.mrna1;Target=FBgn0029752.1 1 30 +
Chr2	gffcl	locus	82628208	82632330	.	+	.	ID=RLOC_00019007;geneIDs=FBgn0051118.1.path1;transcripts=FBgn0051118.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82628208	82632330	.	+	.	ID=FBgn0051118.1.mrna1;geneID=FBgn0051118.1.path1;Name=FBgn0051118.1;Dir=sensecoverage=100.0;identity=100.0;matches=462;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019007
Chr2	stalkie_big_nohaplotig	exon	82628208	82628346	100	+	.	Parent=FBgn0051118.1.mrna1;Target=FBgn0051118.1 1 139 +
Chr2	stalkie_big_nohaplotig	exon	82631117	82631316	100	+	.	Parent=FBgn0051118.1.mrna1;Target=FBgn0051118.1 140 339 +
Chr2	stalkie_big_nohaplotig	exon	82631371	82631463	100	+	.	Parent=FBgn0051118.1.mrna1;Target=FBgn0051118.1 340 432 +
Chr2	stalkie_big_nohaplotig	exon	82632301	82632330	100	+	.	Parent=FBgn0051118.1.mrna1;Target=FBgn0051118.1 433 462 +
Chr2	stalkie_big_nohaplotig	CDS	82628208	82628346	.	+	0	Parent=FBgn0051118.1.mrna1;Target=FBgn0051118.1 1 139 +
Chr2	stalkie_big_nohaplotig	CDS	82631117	82631316	.	+	2	Parent=FBgn0051118.1.mrna1;Target=FBgn0051118.1 140 339 +
Chr2	stalkie_big_nohaplotig	CDS	82631371	82631463	.	+	0	Parent=FBgn0051118.1.mrna1;Target=FBgn0051118.1 340 432 +
Chr2	stalkie_big_nohaplotig	CDS	82632301	82632330	.	+	0	Parent=FBgn0051118.1.mrna1;Target=FBgn0051118.1 433 462 +
Chr2	gffcl	locus	82635267	82635646	.	-	.	ID=RLOC_00019008;geneIDs=comp152064_c1_seq1.path1;transcripts=comp152064_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82635267	82635646	.	-	.	ID=comp152064_c1_seq1.mrna1;geneID=comp152064_c1_seq1.path1;Name=comp152064_c1_seq1;Dir=indeterminatecoverage=95.3;identity=98.2;matches=379;mismatches=1;indels=6;unknowns=0;Target=comp152064_c1_seq1 405 20 .;CDS_Target=comp152064_c1_seq1 81 22 .;locus=RLOC_00019008
Chr2	stalkie_big_nohaplotig	exon	82635267	82635646	98	-	.	Parent=comp152064_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	82635585	82635644	.	-	0	Parent=comp152064_c1_seq1.mrna1
Chr2	gffcl	locus	82643321	82643960	.	+	.	ID=RLOC_00019009;geneIDs=FBgn0039229.1.path2;transcripts=FBgn0039229.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	82643321	82643960	.	+	.	ID=FBgn0039229.1.mrna2;geneID=FBgn0039229.1.path2;Name=FBgn0039229.1;Dir=sensecoverage=23.3;identity=100.0;matches=580;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019009
Chr2	stalkie_big_nohaplotig	exon	82643321	82643656	100	+	.	Parent=FBgn0039229.1.mrna2;Target=FBgn0039229.1 1911 2246 +
Chr2	stalkie_big_nohaplotig	exon	82643717	82643960	100	+	.	Parent=FBgn0039229.1.mrna2;Target=FBgn0039229.1 2247 2490 +
Chr2	stalkie_big_nohaplotig	CDS	82643321	82643656	.	+	2	Parent=FBgn0039229.1.mrna2;Target=FBgn0039229.1 1911 2246 +
Chr2	stalkie_big_nohaplotig	CDS	82643717	82643960	.	+	2	Parent=FBgn0039229.1.mrna2;Target=FBgn0039229.1 2247 2490 +
Chr2	gffcl	locus	82644505	82655202	.	-	.	ID=RLOC_00019010;geneIDs=FBgn0045980.1.path1;transcripts=FBgn0045980.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82644505	82655202	.	-	.	ID=FBgn0045980.1.mrna1;geneID=FBgn0045980.1.path1;Name=FBgn0045980.1;Dir=sensecoverage=100.0;identity=99.6;matches=2570;mismatches=10;indels=0;unknowns=0;locus=RLOC_00019010
Chr2	stalkie_big_nohaplotig	exon	82644505	82644637	100	-	.	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 2448 2580 +
Chr2	stalkie_big_nohaplotig	exon	82647963	82648084	100	-	.	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 2326 2447 +
Chr2	stalkie_big_nohaplotig	exon	82648146	82648262	100	-	.	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 2209 2325 +
Chr2	stalkie_big_nohaplotig	exon	82648325	82648510	100	-	.	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 2023 2208 +
Chr2	stalkie_big_nohaplotig	exon	82648588	82648756	98	-	.	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 1854 2022 +
Chr2	stalkie_big_nohaplotig	exon	82648818	82649084	100	-	.	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 1587 1853 +
Chr2	stalkie_big_nohaplotig	exon	82649140	82649257	100	-	.	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 1469 1586 +
Chr2	stalkie_big_nohaplotig	exon	82649321	82649445	100	-	.	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 1344 1468 +
Chr2	stalkie_big_nohaplotig	exon	82649604	82649795	99	-	.	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 1152 1343 +
Chr2	stalkie_big_nohaplotig	exon	82652958	82653043	100	-	.	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 1066 1151 +
Chr2	stalkie_big_nohaplotig	exon	82653415	82653483	100	-	.	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 997 1065 +
Chr2	stalkie_big_nohaplotig	exon	82653676	82653804	100	-	.	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 868 996 +
Chr2	stalkie_big_nohaplotig	exon	82653875	82654013	100	-	.	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 729 867 +
Chr2	stalkie_big_nohaplotig	exon	82654334	82654522	99	-	.	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 540 728 +
Chr2	stalkie_big_nohaplotig	exon	82654592	82654748	99	-	.	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 383 539 +
Chr2	stalkie_big_nohaplotig	exon	82654821	82655202	98	-	.	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 1 382 +
Chr2	stalkie_big_nohaplotig	CDS	82644505	82644637	.	-	1	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 2448 2580 +
Chr2	stalkie_big_nohaplotig	CDS	82647963	82648084	.	-	0	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 2326 2447 +
Chr2	stalkie_big_nohaplotig	CDS	82648146	82648262	.	-	0	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 2209 2325 +
Chr2	stalkie_big_nohaplotig	CDS	82648325	82648510	.	-	0	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 2023 2208 +
Chr2	stalkie_big_nohaplotig	CDS	82648588	82648756	.	-	1	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 1854 2022 +
Chr2	stalkie_big_nohaplotig	CDS	82648818	82649084	.	-	1	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 1587 1853 +
Chr2	stalkie_big_nohaplotig	CDS	82649140	82649257	.	-	2	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 1469 1586 +
Chr2	stalkie_big_nohaplotig	CDS	82649321	82649445	.	-	1	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 1344 1468 +
Chr2	stalkie_big_nohaplotig	CDS	82649604	82649795	.	-	1	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 1152 1343 +
Chr2	stalkie_big_nohaplotig	CDS	82652958	82653043	.	-	0	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 1066 1151 +
Chr2	stalkie_big_nohaplotig	CDS	82653415	82653483	.	-	0	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 997 1065 +
Chr2	stalkie_big_nohaplotig	CDS	82653676	82653804	.	-	0	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 868 996 +
Chr2	stalkie_big_nohaplotig	CDS	82653875	82654013	.	-	1	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 729 867 +
Chr2	stalkie_big_nohaplotig	CDS	82654334	82654522	.	-	1	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 540 728 +
Chr2	stalkie_big_nohaplotig	CDS	82654592	82654748	.	-	2	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 383 539 +
Chr2	stalkie_big_nohaplotig	CDS	82654821	82655202	.	-	0	Parent=FBgn0045980.1.mrna1;Target=FBgn0045980.1 1 382 +
Chr2	gffcl	locus	82658181	82659885	.	+	.	ID=RLOC_00019011;geneIDs=comp152064_c1_seq1.path2,comp161387_c1_seq1.path1;transcripts=comp161387_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82658181	82659510	.	+	.	ID=comp161387_c1_seq1.mrna1;geneID=comp161387_c1_seq1.path1;Name=comp161387_c1_seq1;Dir=indeterminatecoverage=98.6;identity=97.6;matches=1304;mismatches=26;indels=6;unknowns=0;Target=comp161387_c1_seq1 1343 8 .;CDS_Target=comp161387_c1_seq1 874 749 .;locus=RLOC_00019011
Chr2	stalkie_big_nohaplotig	exon	82658181	82659510	97	+	.	Parent=comp161387_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	82658922	82659047	.	+	0	Parent=comp161387_c1_seq1.mrna1
Chr2	gffcl	locus	82799523	82804720	.	-	.	ID=RLOC_00019012;geneIDs=FBgn0039229.1.path1,comp117248_c0_seq1.path1;transcripts=FBgn0039229.1.mrna1,comp117248_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82799523	82804720	.	-	.	ID=FBgn0039229.1.mrna1;geneID=FBgn0039229.1.path1;Name=FBgn0039229.1;Dir=sensecoverage=76.7;identity=99.6;matches=1903;mismatches=7;indels=0;unknowns=0;locus=RLOC_00019012
Chr2	stalkie_big_nohaplotig	exon	82799523	82799684	100	-	.	Parent=FBgn0039229.1.mrna1;Target=FBgn0039229.1 1749 1910 +
Chr2	stalkie_big_nohaplotig	exon	82800078	82800987	99	-	.	Parent=FBgn0039229.1.mrna1;Target=FBgn0039229.1 839 1748 +
Chr2	stalkie_big_nohaplotig	exon	82803080	82803123	100	-	.	Parent=FBgn0039229.1.mrna1;Target=FBgn0039229.1 795 838 +
Chr2	stalkie_big_nohaplotig	exon	82803440	82803593	99	-	.	Parent=FBgn0039229.1.mrna1;Target=FBgn0039229.1 641 794 +
Chr2	stalkie_big_nohaplotig	exon	82803884	82803908	100	-	.	Parent=FBgn0039229.1.mrna1;Target=FBgn0039229.1 616 640 +
Chr2	stalkie_big_nohaplotig	exon	82803971	82804444	99	-	.	Parent=FBgn0039229.1.mrna1;Target=FBgn0039229.1 142 615 +
Chr2	stalkie_big_nohaplotig	exon	82804580	82804720	97	-	.	Parent=FBgn0039229.1.mrna1;Target=FBgn0039229.1 1 141 +
Chr2	stalkie_big_nohaplotig	CDS	82799523	82799684	.	-	1	Parent=FBgn0039229.1.mrna1;Target=FBgn0039229.1 1749 1910 +
Chr2	stalkie_big_nohaplotig	CDS	82800078	82800987	.	-	2	Parent=FBgn0039229.1.mrna1;Target=FBgn0039229.1 839 1748 +
Chr2	stalkie_big_nohaplotig	CDS	82803080	82803123	.	-	1	Parent=FBgn0039229.1.mrna1;Target=FBgn0039229.1 795 838 +
Chr2	stalkie_big_nohaplotig	CDS	82803440	82803593	.	-	2	Parent=FBgn0039229.1.mrna1;Target=FBgn0039229.1 641 794 +
Chr2	stalkie_big_nohaplotig	CDS	82803884	82803908	.	-	0	Parent=FBgn0039229.1.mrna1;Target=FBgn0039229.1 616 640 +
Chr2	stalkie_big_nohaplotig	CDS	82803971	82804444	.	-	0	Parent=FBgn0039229.1.mrna1;Target=FBgn0039229.1 142 615 +
Chr2	stalkie_big_nohaplotig	CDS	82804580	82804720	.	-	0	Parent=FBgn0039229.1.mrna1;Target=FBgn0039229.1 1 141 +
Chr2	stalkie_big_nohaplotig	mRNA	82803103	82803463	.	-	.	ID=comp117248_c0_seq1.mrna1;geneID=comp117248_c0_seq1.path1;Name=comp117248_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=361;mismatches=0;indels=0;unknowns=0;Target=comp117248_c0_seq1 361 1 .;CDS_Target=comp117248_c0_seq1 359 177 .;locus=RLOC_00019012
Chr2	stalkie_big_nohaplotig	exon	82803103	82803463	100	-	.	Parent=comp117248_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	82803105	82803287	.	-	0	Parent=comp117248_c0_seq1.mrna1
Chr2	gffcl	locus	82811241	82812565	.	+	.	ID=RLOC_00019013;geneIDs=FBgn0002622.1.path1;transcripts=FBgn0002622.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82811241	82812565	.	+	.	ID=FBgn0002622.1.mrna1;geneID=FBgn0002622.1.path1;Name=FBgn0002622.1;Dir=sensecoverage=100.0;identity=99.7;matches=742;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019013
Chr2	stalkie_big_nohaplotig	exon	82811241	82811279	100	+	.	Parent=FBgn0002622.1.mrna1;Target=FBgn0002622.1 1 39 +
Chr2	stalkie_big_nohaplotig	exon	82811861	82812565	99	+	.	Parent=FBgn0002622.1.mrna1;Target=FBgn0002622.1 40 744 +
Chr2	stalkie_big_nohaplotig	CDS	82811241	82811279	.	+	0	Parent=FBgn0002622.1.mrna1;Target=FBgn0002622.1 1 39 +
Chr2	stalkie_big_nohaplotig	CDS	82811861	82812565	.	+	0	Parent=FBgn0002622.1.mrna1;Target=FBgn0002622.1 40 744 +
Chr2	gffcl	locus	82813072	82813479	.	+	.	ID=RLOC_00019014;geneIDs=FBgn0033687.1.path1;transcripts=FBgn0033687.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82813072	82813479	.	+	.	ID=FBgn0033687.1.mrna1;geneID=FBgn0033687.1.path1;Name=FBgn0033687.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=408;mismatches=0;indels=0;unknowns=0;Target=FBgn0033687.1 408 1 .;locus=RLOC_00019014
Chr2	stalkie_big_nohaplotig	exon	82813072	82813479	100	+	.	Parent=FBgn0033687.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	82813072	82813479	.	+	0	Parent=FBgn0033687.1.mrna1
Chr2	gffcl	locus	82898033	82898857	.	-	.	ID=RLOC_00019015;geneIDs=comp140164_c0_seq1.path1;transcripts=comp140164_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	82898033	82898857	.	-	.	ID=comp140164_c0_seq1.mrna1;geneID=comp140164_c0_seq1.path1;Name=comp140164_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=825;mismatches=0;indels=0;unknowns=0;Target=comp140164_c0_seq1 825 1 .;CDS_Target=comp140164_c0_seq1 352 272 .;locus=RLOC_00019015
Chr2	stalkie_big_nohaplotig	exon	82898033	82898857	100	-	.	Parent=comp140164_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	82898506	82898586	.	-	0	Parent=comp140164_c0_seq1.mrna1
Chr2	gffcl	locus	82953862	83617401	.	-	.	ID=RLOC_00019016;geneIDs=comp140966_c1_seq1.path6;transcripts=comp140966_c1_seq1.mrna6
Chr2	stalkie_big_nohaplotig	mRNA	82953862	83617401	.	-	.	ID=comp140966_c1_seq1.mrna6;geneID=comp140966_c1_seq1.path6;Name=comp140966_c1_seq1;Dir=indeterminatecoverage=19.1;identity=86.8;matches=92;mismatches=14;indels=0;unknowns=0;Target=comp140966_c1_seq1 517 470 .;locus=RLOC_00019016
Chr2	stalkie_big_nohaplotig	exon	82953862	82953956	85	-	.	Parent=comp140966_c1_seq1.mrna6;Target=comp140966_c1_seq1 517 423 .
Chr2	stalkie_big_nohaplotig	exon	83617391	83617401	100	-	.	Parent=comp140966_c1_seq1.mrna6;Target=comp140966_c1_seq1 422 412 .
Chr2	stalkie_big_nohaplotig	CDS	82953862	82953909	.	-	0	Parent=comp140966_c1_seq1.mrna6
Chr2	gffcl	locus	83008772	83679945	.	.	.	ID=RLOC_00019017;geneIDs=comp151425_c0_seq1.path1,comp155632_c0_seq1.path1;transcripts=comp151425_c0_seq1.mrna1,comp155632_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83008772	83679945	.	+	.	ID=comp151425_c0_seq1.mrna1;geneID=comp151425_c0_seq1.path1;Name=comp151425_c0_seq1;Dir=antisensecoverage=72.8;identity=95.0;matches=1179;mismatches=55;indels=7;unknowns=0;Target=comp151425_c0_seq1 661 894 .;locus=RLOC_00019017
Chr2	stalkie_big_nohaplotig	exon	83008772	83008777	100	+	.	Parent=comp151425_c0_seq1.mrna1;Target=comp151425_c0_seq1 1269 1274 -
Chr2	stalkie_big_nohaplotig	exon	83021781	83021782	100	+	.	Parent=comp151425_c0_seq1.mrna1;Target=comp151425_c0_seq1 1267 1268 -
Chr2	stalkie_big_nohaplotig	exon	83033697	83033700	100	+	.	Parent=comp151425_c0_seq1.mrna1;Target=comp151425_c0_seq1 1262 1265 -
Chr2	stalkie_big_nohaplotig	exon	83035669	83035672	100	+	.	Parent=comp151425_c0_seq1.mrna1;Target=comp151425_c0_seq1 1258 1261 -
Chr2	stalkie_big_nohaplotig	exon	83058805	83058807	100	+	.	Parent=comp151425_c0_seq1.mrna1;Target=comp151425_c0_seq1 1255 1257 -
Chr2	stalkie_big_nohaplotig	exon	83059048	83059049	100	+	.	Parent=comp151425_c0_seq1.mrna1;Target=comp151425_c0_seq1 1253 1254 -
Chr2	stalkie_big_nohaplotig	exon	83063381	83063387	100	+	.	Parent=comp151425_c0_seq1.mrna1;Target=comp151425_c0_seq1 1246 1252 -
Chr2	stalkie_big_nohaplotig	exon	83063965	83063971	100	+	.	Parent=comp151425_c0_seq1.mrna1;Target=comp151425_c0_seq1 1239 1245 -
Chr2	stalkie_big_nohaplotig	exon	83073008	83073016	33	+	.	Parent=comp151425_c0_seq1.mrna1;Target=comp151425_c0_seq1 1236 1238 -
Chr2	stalkie_big_nohaplotig	exon	83677712	83677860	95	+	.	Parent=comp151425_c0_seq1.mrna1;Target=comp151425_c0_seq1 1087 1235 -
Chr2	stalkie_big_nohaplotig	exon	83678515	83678571	94	+	.	Parent=comp151425_c0_seq1.mrna1;Target=comp151425_c0_seq1 1030 1086 -
Chr2	stalkie_big_nohaplotig	exon	83678757	83679679	95	+	.	Parent=comp151425_c0_seq1.mrna1;Target=comp151425_c0_seq1 108 1029 -
Chr2	stalkie_big_nohaplotig	exon	83679879	83679945	95	+	.	Parent=comp151425_c0_seq1.mrna1;Target=comp151425_c0_seq1 41 107 -
Chr2	stalkie_big_nohaplotig	CDS	83678892	83679126	.	+	0	Parent=comp151425_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83072983	83073503	.	-	.	ID=comp155632_c0_seq1.mrna1;geneID=comp155632_c0_seq1.path1;Name=comp155632_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=504;mismatches=3;indels=14;unknowns=0;Target=comp155632_c0_seq1 507 1 .;CDS_Target=comp155632_c0_seq1 79 2 .;locus=RLOC_00019017
Chr2	stalkie_big_nohaplotig	exon	83072983	83073503	96	-	.	Parent=comp155632_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83073411	83073502	.	-	0	Parent=comp155632_c0_seq1.mrna1
Chr2	gffcl	locus	83075003	83075659	.	+	.	ID=RLOC_00019018;geneIDs=comp157827_c0_seq1.path1;transcripts=comp157827_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83075003	83075659	.	+	.	ID=comp157827_c0_seq1.mrna1;geneID=comp157827_c0_seq1.path1;Name=comp157827_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=653;mismatches=4;indels=0;unknowns=0;Target=comp157827_c0_seq1 657 1 .;CDS_Target=comp157827_c0_seq1 317 258 .;locus=RLOC_00019018
Chr2	stalkie_big_nohaplotig	exon	83075003	83075659	99	+	.	Parent=comp157827_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83075260	83075319	.	+	0	Parent=comp157827_c0_seq1.mrna1
Chr2	gffcl	locus	83079346	83084402	.	-	.	ID=RLOC_00019019;geneIDs=FBgn0039075.1.path1;transcripts=FBgn0039075.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83079346	83084402	.	-	.	ID=FBgn0039075.1.mrna1;geneID=FBgn0039075.1.path1;Name=FBgn0039075.1;Dir=sensecoverage=99.7;identity=99.8;matches=3567;mismatches=8;indels=0;unknowns=0;locus=RLOC_00019019
Chr2	stalkie_big_nohaplotig	exon	83079346	83079391	100	-	.	Parent=FBgn0039075.1.mrna1;Target=FBgn0039075.1 3540 3585 +
Chr2	stalkie_big_nohaplotig	exon	83079453	83079710	98	-	.	Parent=FBgn0039075.1.mrna1;Target=FBgn0039075.1 3282 3539 +
Chr2	stalkie_big_nohaplotig	exon	83079784	83080019	100	-	.	Parent=FBgn0039075.1.mrna1;Target=FBgn0039075.1 3046 3281 +
Chr2	stalkie_big_nohaplotig	exon	83080092	83081166	99	-	.	Parent=FBgn0039075.1.mrna1;Target=FBgn0039075.1 1971 3045 +
Chr2	stalkie_big_nohaplotig	exon	83081278	83081488	100	-	.	Parent=FBgn0039075.1.mrna1;Target=FBgn0039075.1 1760 1970 +
Chr2	stalkie_big_nohaplotig	exon	83081580	83081918	100	-	.	Parent=FBgn0039075.1.mrna1;Target=FBgn0039075.1 1421 1759 +
Chr2	stalkie_big_nohaplotig	exon	83081988	83082067	100	-	.	Parent=FBgn0039075.1.mrna1;Target=FBgn0039075.1 1341 1420 +
Chr2	stalkie_big_nohaplotig	exon	83082947	83083274	100	-	.	Parent=FBgn0039075.1.mrna1;Target=FBgn0039075.1 1013 1340 +
Chr2	stalkie_big_nohaplotig	exon	83083344	83083947	99	-	.	Parent=FBgn0039075.1.mrna1;Target=FBgn0039075.1 409 1012 +
Chr2	stalkie_big_nohaplotig	exon	83084005	83084402	100	-	.	Parent=FBgn0039075.1.mrna1;Target=FBgn0039075.1 11 408 +
Chr2	stalkie_big_nohaplotig	CDS	83079346	83079391	.	-	1	Parent=FBgn0039075.1.mrna1;Target=FBgn0039075.1 3540 3585 +
Chr2	stalkie_big_nohaplotig	CDS	83079453	83079710	.	-	1	Parent=FBgn0039075.1.mrna1;Target=FBgn0039075.1 3282 3539 +
Chr2	stalkie_big_nohaplotig	CDS	83079784	83080019	.	-	0	Parent=FBgn0039075.1.mrna1;Target=FBgn0039075.1 3046 3281 +
Chr2	stalkie_big_nohaplotig	CDS	83080092	83081166	.	-	1	Parent=FBgn0039075.1.mrna1;Target=FBgn0039075.1 1971 3045 +
Chr2	stalkie_big_nohaplotig	CDS	83081278	83081488	.	-	2	Parent=FBgn0039075.1.mrna1;Target=FBgn0039075.1 1760 1970 +
Chr2	stalkie_big_nohaplotig	CDS	83081580	83081918	.	-	2	Parent=FBgn0039075.1.mrna1;Target=FBgn0039075.1 1421 1759 +
Chr2	stalkie_big_nohaplotig	CDS	83081988	83082067	.	-	1	Parent=FBgn0039075.1.mrna1;Target=FBgn0039075.1 1341 1420 +
Chr2	stalkie_big_nohaplotig	CDS	83082947	83083274	.	-	2	Parent=FBgn0039075.1.mrna1;Target=FBgn0039075.1 1013 1340 +
Chr2	stalkie_big_nohaplotig	CDS	83083344	83083947	.	-	0	Parent=FBgn0039075.1.mrna1;Target=FBgn0039075.1 409 1012 +
Chr2	stalkie_big_nohaplotig	CDS	83084005	83084400	.	-	0	Parent=FBgn0039075.1.mrna1;Target=FBgn0039075.1 13 408 +
Chr2	gffcl	locus	83199866	83209418	.	+	.	ID=RLOC_00019020;geneIDs=FBgn0039078.1.path1;transcripts=FBgn0039078.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83199866	83209418	.	+	.	ID=FBgn0039078.1.mrna1;geneID=FBgn0039078.1.path1;Name=FBgn0039078.1;Dir=sensecoverage=100.0;identity=99.6;matches=2250;mismatches=9;indels=0;unknowns=0;locus=RLOC_00019020
Chr2	stalkie_big_nohaplotig	exon	83199866	83200177	99	+	.	Parent=FBgn0039078.1.mrna1;Target=FBgn0039078.1 1 312 +
Chr2	stalkie_big_nohaplotig	exon	83207147	83207800	99	+	.	Parent=FBgn0039078.1.mrna1;Target=FBgn0039078.1 313 966 +
Chr2	stalkie_big_nohaplotig	exon	83207949	83208095	100	+	.	Parent=FBgn0039078.1.mrna1;Target=FBgn0039078.1 967 1113 +
Chr2	stalkie_big_nohaplotig	exon	83208273	83209418	99	+	.	Parent=FBgn0039078.1.mrna1;Target=FBgn0039078.1 1114 2259 +
Chr2	stalkie_big_nohaplotig	CDS	83199866	83200177	.	+	0	Parent=FBgn0039078.1.mrna1;Target=FBgn0039078.1 1 312 +
Chr2	stalkie_big_nohaplotig	CDS	83207147	83207800	.	+	0	Parent=FBgn0039078.1.mrna1;Target=FBgn0039078.1 313 966 +
Chr2	stalkie_big_nohaplotig	CDS	83207949	83208095	.	+	0	Parent=FBgn0039078.1.mrna1;Target=FBgn0039078.1 967 1113 +
Chr2	stalkie_big_nohaplotig	CDS	83208273	83209418	.	+	0	Parent=FBgn0039078.1.mrna1;Target=FBgn0039078.1 1114 2259 +
Chr2	gffcl	locus	83211992	83212331	.	-	.	ID=RLOC_00019021;geneIDs=comp136312_c0_seq1.path1;transcripts=comp136312_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83211992	83212331	.	-	.	ID=comp136312_c0_seq1.mrna1;geneID=comp136312_c0_seq1.path1;Name=comp136312_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=340;mismatches=0;indels=0;unknowns=0;Target=comp136312_c0_seq1 340 1 .;CDS_Target=comp136312_c0_seq1 110 3 .;locus=RLOC_00019021
Chr2	stalkie_big_nohaplotig	exon	83211992	83212331	100	-	.	Parent=comp136312_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83212222	83212329	.	-	0	Parent=comp136312_c0_seq1.mrna1
Chr2	gffcl	locus	83246867	83247513	.	+	.	ID=RLOC_00019022;geneIDs=comp156107_c0_seq1.path1;transcripts=comp156107_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83246867	83247513	.	+	.	ID=comp156107_c0_seq1.mrna1;geneID=comp156107_c0_seq1.path1;Name=comp156107_c0_seq1;Dir=antisensecoverage=93.3;identity=97.6;matches=534;mismatches=13;indels=0;unknowns=0;locus=RLOC_00019022
Chr2	stalkie_big_nohaplotig	exon	83246867	83246971	100	+	.	Parent=comp156107_c0_seq1.mrna1;Target=comp156107_c0_seq1 474 578 -
Chr2	stalkie_big_nohaplotig	exon	83247072	83247513	97	+	.	Parent=comp156107_c0_seq1.mrna1;Target=comp156107_c0_seq1 32 473 -
Chr2	stalkie_big_nohaplotig	CDS	83246961	83246971	.	+	0	Parent=comp156107_c0_seq1.mrna1;Target=comp156107_c0_seq1 474 484 .
Chr2	stalkie_big_nohaplotig	CDS	83247072	83247354	.	+	1	Parent=comp156107_c0_seq1.mrna1;Target=comp156107_c0_seq1 191 473 .
Chr2	gffcl	locus	83282465	83283798	.	+	.	ID=RLOC_00019023;geneIDs=comp139440_c0_seq1.path1;transcripts=comp139440_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83282465	83283798	.	+	.	ID=comp139440_c0_seq1.mrna1;geneID=comp139440_c0_seq1.path1;Name=comp139440_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.9;matches=745;mismatches=36;indels=39;unknowns=0;Target=comp139440_c0_seq1 470 330 .;locus=RLOC_00019023
Chr2	stalkie_big_nohaplotig	exon	83282465	83283184	90	+	.	Parent=comp139440_c0_seq1.mrna1;Target=comp139440_c0_seq1 681 1 .
Chr2	stalkie_big_nohaplotig	exon	83283699	83283798	92	+	.	Parent=comp139440_c0_seq1.mrna1;Target=comp139440_c0_seq1 781 682 .
Chr2	stalkie_big_nohaplotig	CDS	83282795	83282947	.	+	0	Parent=comp139440_c0_seq1.mrna1
Chr2	gffcl	locus	83299709	83311333	.	-	.	ID=RLOC_00019024;geneIDs=FBgn0039061.1.path1;transcripts=FBgn0039061.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83299709	83311333	.	-	.	ID=FBgn0039061.1.mrna1;geneID=FBgn0039061.1.path1;Name=FBgn0039061.1;Dir=sensecoverage=100.0;identity=99.9;matches=1591;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019024
Chr2	stalkie_big_nohaplotig	exon	83299709	83300157	100	-	.	Parent=FBgn0039061.1.mrna1;Target=FBgn0039061.1 1145 1593 +
Chr2	stalkie_big_nohaplotig	exon	83300215	83300451	100	-	.	Parent=FBgn0039061.1.mrna1;Target=FBgn0039061.1 908 1144 +
Chr2	stalkie_big_nohaplotig	exon	83300516	83300705	98	-	.	Parent=FBgn0039061.1.mrna1;Target=FBgn0039061.1 718 907 +
Chr2	stalkie_big_nohaplotig	exon	83300773	83301303	100	-	.	Parent=FBgn0039061.1.mrna1;Target=FBgn0039061.1 187 717 +
Chr2	stalkie_big_nohaplotig	exon	83304220	83304334	100	-	.	Parent=FBgn0039061.1.mrna1;Target=FBgn0039061.1 72 186 +
Chr2	stalkie_big_nohaplotig	exon	83311263	83311333	100	-	.	Parent=FBgn0039061.1.mrna1;Target=FBgn0039061.1 1 71 +
Chr2	stalkie_big_nohaplotig	CDS	83299709	83300157	.	-	2	Parent=FBgn0039061.1.mrna1;Target=FBgn0039061.1 1145 1593 +
Chr2	stalkie_big_nohaplotig	CDS	83300215	83300451	.	-	2	Parent=FBgn0039061.1.mrna1;Target=FBgn0039061.1 908 1144 +
Chr2	stalkie_big_nohaplotig	CDS	83300516	83300705	.	-	0	Parent=FBgn0039061.1.mrna1;Target=FBgn0039061.1 718 907 +
Chr2	stalkie_big_nohaplotig	CDS	83300773	83301303	.	-	0	Parent=FBgn0039061.1.mrna1;Target=FBgn0039061.1 187 717 +
Chr2	stalkie_big_nohaplotig	CDS	83304220	83304334	.	-	1	Parent=FBgn0039061.1.mrna1;Target=FBgn0039061.1 72 186 +
Chr2	stalkie_big_nohaplotig	CDS	83311263	83311333	.	-	0	Parent=FBgn0039061.1.mrna1;Target=FBgn0039061.1 1 71 +
Chr2	gffcl	locus	83329018	83400421	.	-	.	ID=RLOC_00019025;geneIDs=comp142741_c0_seq1.path1;transcripts=comp142741_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83329018	83400421	.	-	.	ID=comp142741_c0_seq1.mrna1;geneID=comp142741_c0_seq1.path1;Name=comp142741_c0_seq1;Dir=sensecoverage=64.3;identity=98.2;matches=654;mismatches=11;indels=1;unknowns=8;Target=comp142741_c0_seq1 186 281 +;locus=RLOC_00019025
Chr2	stalkie_big_nohaplotig	exon	83329018	83329025	100	-	.	Parent=comp142741_c0_seq1.mrna1;Target=comp142741_c0_seq1 666 673 +
Chr2	stalkie_big_nohaplotig	exon	83340458	83340465	62	-	.	Parent=comp142741_c0_seq1.mrna1;Target=comp142741_c0_seq1 659 665 +
Chr2	stalkie_big_nohaplotig	exon	83354833	83354837	100	-	.	Parent=comp142741_c0_seq1.mrna1;Target=comp142741_c0_seq1 654 658 +
Chr2	stalkie_big_nohaplotig	exon	83357623	83357629	100	-	.	Parent=comp142741_c0_seq1.mrna1;Target=comp142741_c0_seq1 647 653 +
Chr2	stalkie_big_nohaplotig	exon	83361086	83361095	70	-	.	Parent=comp142741_c0_seq1.mrna1;Target=comp142741_c0_seq1 637 646 +
Chr2	stalkie_big_nohaplotig	exon	83384303	83384309	100	-	.	Parent=comp142741_c0_seq1.mrna1;Target=comp142741_c0_seq1 630 636 +
Chr2	stalkie_big_nohaplotig	exon	83392061	83392062	100	-	.	Parent=comp142741_c0_seq1.mrna1;Target=comp142741_c0_seq1 628 629 +
Chr2	stalkie_big_nohaplotig	exon	83394291	83394293	100	-	.	Parent=comp142741_c0_seq1.mrna1;Target=comp142741_c0_seq1 625 627 +
Chr2	stalkie_big_nohaplotig	exon	83399741	83400286	98	-	.	Parent=comp142741_c0_seq1.mrna1;Target=comp142741_c0_seq1 79 624 +
Chr2	stalkie_big_nohaplotig	exon	83400344	83400421	100	-	.	Parent=comp142741_c0_seq1.mrna1;Target=comp142741_c0_seq1 1 78 +
Chr2	stalkie_big_nohaplotig	CDS	83400084	83400179	.	-	0	Parent=comp142741_c0_seq1.mrna1
Chr2	gffcl	locus	83334837	83342405	.	-	.	ID=RLOC_00019026;geneIDs=comp152470_c0_seq1.path1;transcripts=comp152470_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83334837	83342405	.	-	.	ID=comp152470_c0_seq1.mrna1;geneID=comp152470_c0_seq1.path1;Name=comp152470_c0_seq1;Dir=sensecoverage=98.6;identity=94.6;matches=1024;mismatches=49;indels=9;unknowns=0;locus=RLOC_00019026
Chr2	stalkie_big_nohaplotig	exon	83334837	83335629	94	-	.	Parent=comp152470_c0_seq1.mrna1;Target=comp152470_c0_seq1 287 1075 +
Chr2	stalkie_big_nohaplotig	exon	83335659	83335924	95	-	.	Parent=comp152470_c0_seq1.mrna1;Target=comp152470_c0_seq1 22 286 +
Chr2	stalkie_big_nohaplotig	exon	83342385	83342405	100	-	.	Parent=comp152470_c0_seq1.mrna1;Target=comp152470_c0_seq1 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	83335490	83335629	.	-	2	Parent=comp152470_c0_seq1.mrna1;Target=comp152470_c0_seq1 287 426 +
Chr2	stalkie_big_nohaplotig	CDS	83335659	83335704	.	-	0	Parent=comp152470_c0_seq1.mrna1;Target=comp152470_c0_seq1 241 286 +
Chr2	gffcl	locus	83412374	83413024	.	+	.	ID=RLOC_00019027;geneIDs=comp135703_c0_seq1.path1;transcripts=comp135703_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83412374	83413024	.	+	.	ID=comp135703_c0_seq1.mrna1;geneID=comp135703_c0_seq1.path1;Name=comp135703_c0_seq1;Dir=indeterminatecoverage=98.2;identity=98.9;matches=646;mismatches=4;indels=3;unknowns=0;Target=comp135703_c0_seq1 652 1 .;CDS_Target=comp135703_c0_seq1 90 1 .;locus=RLOC_00019027
Chr2	stalkie_big_nohaplotig	exon	83412374	83413024	98	+	.	Parent=comp135703_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83412374	83412463	.	+	0	Parent=comp135703_c0_seq1.mrna1
Chr2	gffcl	locus	83483878	83597251	.	-	.	ID=RLOC_00019028;geneIDs=comp159210_c1_seq1.path1;transcripts=comp159210_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83483878	83597251	.	-	.	ID=comp159210_c1_seq1.mrna1;geneID=comp159210_c1_seq1.path1;Name=comp159210_c1_seq1;Dir=indeterminatecoverage=56.8;identity=97.4;matches=4361;mismatches=34;indels=82;unknowns=0;Target=comp159210_c1_seq1 4240 4064 .;locus=RLOC_00019028
Chr2	stalkie_big_nohaplotig	exon	83483878	83488235	97	-	.	Parent=comp159210_c1_seq1.mrna1;Target=comp159210_c1_seq1 7777 3341 .
Chr2	stalkie_big_nohaplotig	exon	83517356	83517367	75	-	.	Parent=comp159210_c1_seq1.mrna1;Target=comp159210_c1_seq1 3340 3329 .
Chr2	stalkie_big_nohaplotig	exon	83546351	83546356	100	-	.	Parent=comp159210_c1_seq1.mrna1;Target=comp159210_c1_seq1 3328 3323 .
Chr2	stalkie_big_nohaplotig	exon	83554499	83554504	100	-	.	Parent=comp159210_c1_seq1.mrna1;Target=comp159210_c1_seq1 3322 3317 .
Chr2	stalkie_big_nohaplotig	exon	83562169	83562170	100	-	.	Parent=comp159210_c1_seq1.mrna1;Target=comp159210_c1_seq1 3316 3315 .
Chr2	stalkie_big_nohaplotig	exon	83597239	83597251	92	-	.	Parent=comp159210_c1_seq1.mrna1;Target=comp159210_c1_seq1 3314 3303 .
Chr2	stalkie_big_nohaplotig	CDS	83487338	83487514	.	-	0	Parent=comp159210_c1_seq1.mrna1
Chr2	gffcl	locus	83571609	83572158	.	+	.	ID=RLOC_00019029;geneIDs=comp154844_c0_seq1.path1;transcripts=comp154844_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83571609	83572158	.	+	.	ID=comp154844_c0_seq1.mrna1;geneID=comp154844_c0_seq1.path1;Name=comp154844_c0_seq1;Dir=indeterminatecoverage=95.5;identity=97.8;matches=539;mismatches=11;indels=1;unknowns=0;Target=comp154844_c0_seq1 551 1 .;CDS_Target=comp154844_c0_seq1 533 489 .;locus=RLOC_00019029
Chr2	stalkie_big_nohaplotig	exon	83571609	83572158	97	+	.	Parent=comp154844_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83572096	83572140	.	+	0	Parent=comp154844_c0_seq1.mrna1
Chr2	gffcl	locus	83573028	83573674	.	-	.	ID=RLOC_00019030;geneIDs=comp150748_c0_seq1.path1;transcripts=comp150748_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83573028	83573674	.	-	.	ID=comp150748_c0_seq1.mrna1;geneID=comp150748_c0_seq1.path1;Name=comp150748_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=642;mismatches=5;indels=2;unknowns=0;Target=comp150748_c0_seq1 649 1 .;CDS_Target=comp150748_c0_seq1 82 2 .;locus=RLOC_00019030
Chr2	stalkie_big_nohaplotig	exon	83573028	83573674	98	-	.	Parent=comp150748_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83573593	83573673	.	-	0	Parent=comp150748_c0_seq1.mrna1
Chr2	gffcl	locus	83574289	83574598	.	-	.	ID=RLOC_00019031;geneIDs=comp151879_c0_seq1.path1;transcripts=comp151879_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83574289	83574598	.	-	.	ID=comp151879_c0_seq1.mrna1;geneID=comp151879_c0_seq1.path1;Name=comp151879_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.9;matches=285;mismatches=14;indels=11;unknowns=0;Target=comp151879_c0_seq1 299 1 .;CDS_Target=comp151879_c0_seq1 90 1 .;locus=RLOC_00019031
Chr2	stalkie_big_nohaplotig	exon	83574289	83574598	91	-	.	Parent=comp151879_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83574509	83574598	.	-	0	Parent=comp151879_c0_seq1.mrna1
Chr2	gffcl	locus	83575457	83576467	.	-	.	ID=RLOC_00019032;geneIDs=ORF1727.path1;transcripts=ORF1727.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83575457	83576467	.	-	.	ID=ORF1727.mrna1;geneID=ORF1727.path1;Name=ORF1727;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1008;mismatches=3;indels=0;unknowns=0;Target=ORF1727 1011 1 .;locus=RLOC_00019032
Chr2	stalkie_big_nohaplotig	exon	83575457	83576467	99	-	.	Parent=ORF1727.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83575457	83576467	.	-	0	Parent=ORF1727.mrna1
Chr2	gffcl	locus	83647078	83647566	.	-	.	ID=RLOC_00019034;geneIDs=comp118032_c0_seq1.path1;transcripts=comp118032_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83647078	83647566	.	-	.	ID=comp118032_c0_seq1.mrna1;geneID=comp118032_c0_seq1.path1;Name=comp118032_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.7;matches=463;mismatches=2;indels=24;unknowns=0;Target=comp118032_c0_seq1 465 1 .;CDS_Target=comp118032_c0_seq1 432 301 .;locus=RLOC_00019034
Chr2	stalkie_big_nohaplotig	exon	83647078	83647566	94	-	.	Parent=comp118032_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83647111	83647242	.	-	0	Parent=comp118032_c0_seq1.mrna1
Chr2	gffcl	locus	83652852	83658170	.	+	.	ID=RLOC_00019035;geneIDs=FBgn0039507.1.path1;transcripts=FBgn0039507.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83652852	83658170	.	+	.	ID=FBgn0039507.1.mrna1;geneID=FBgn0039507.1.path1;Name=FBgn0039507.1;Dir=sensecoverage=99.9;identity=99.4;matches=1874;mismatches=12;indels=0;unknowns=0;locus=RLOC_00019035
Chr2	stalkie_big_nohaplotig	exon	83652852	83652936	100	+	.	Parent=FBgn0039507.1.mrna1;Target=FBgn0039507.1 1 85 +
Chr2	stalkie_big_nohaplotig	exon	83656315	83657025	99	+	.	Parent=FBgn0039507.1.mrna1;Target=FBgn0039507.1 86 796 +
Chr2	stalkie_big_nohaplotig	exon	83657081	83658170	99	+	.	Parent=FBgn0039507.1.mrna1;Target=FBgn0039507.1 797 1886 +
Chr2	stalkie_big_nohaplotig	CDS	83652852	83652936	.	+	0	Parent=FBgn0039507.1.mrna1;Target=FBgn0039507.1 1 85 +
Chr2	stalkie_big_nohaplotig	CDS	83656315	83657025	.	+	2	Parent=FBgn0039507.1.mrna1;Target=FBgn0039507.1 86 796 +
Chr2	stalkie_big_nohaplotig	CDS	83657081	83658168	.	+	2	Parent=FBgn0039507.1.mrna1;Target=FBgn0039507.1 797 1884 +
Chr2	gffcl	locus	83665164	83674600	.	-	.	ID=RLOC_00019036;geneIDs=FBgn0046247.1.path1;transcripts=FBgn0046247.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83665164	83674600	.	-	.	ID=FBgn0046247.1.mrna1;geneID=FBgn0046247.1.path1;Name=FBgn0046247.1;Dir=sensecoverage=100.0;identity=99.6;matches=538;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019036
Chr2	stalkie_big_nohaplotig	exon	83665164	83665328	99	-	.	Parent=FBgn0046247.1.mrna1;Target=FBgn0046247.1 376 540 +
Chr2	stalkie_big_nohaplotig	exon	83665811	83666021	100	-	.	Parent=FBgn0046247.1.mrna1;Target=FBgn0046247.1 165 375 +
Chr2	stalkie_big_nohaplotig	exon	83674437	83674600	99	-	.	Parent=FBgn0046247.1.mrna1;Target=FBgn0046247.1 1 164 +
Chr2	stalkie_big_nohaplotig	CDS	83665164	83665328	.	-	0	Parent=FBgn0046247.1.mrna1;Target=FBgn0046247.1 376 540 +
Chr2	stalkie_big_nohaplotig	CDS	83665811	83666021	.	-	1	Parent=FBgn0046247.1.mrna1;Target=FBgn0046247.1 165 375 +
Chr2	stalkie_big_nohaplotig	CDS	83674437	83674600	.	-	0	Parent=FBgn0046247.1.mrna1;Target=FBgn0046247.1 1 164 +
Chr2	gffcl	locus	83680844	83681155	.	-	.	ID=RLOC_00019037;geneIDs=comp117004_c0_seq1.path1;transcripts=comp117004_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83680844	83681155	.	-	.	ID=comp117004_c0_seq1.mrna1;geneID=comp117004_c0_seq1.path1;Name=comp117004_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=311;mismatches=1;indels=0;unknowns=0;Target=comp117004_c0_seq1 312 1 .;CDS_Target=comp117004_c0_seq1 77 3 .;locus=RLOC_00019037
Chr2	stalkie_big_nohaplotig	exon	83680844	83681155	99	-	.	Parent=comp117004_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83681079	83681153	.	-	0	Parent=comp117004_c0_seq1.mrna1
Chr2	gffcl	locus	83681250	83681731	.	-	.	ID=RLOC_00019038;geneIDs=FBgn0039505.1.path1;transcripts=FBgn0039505.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83681250	83681731	.	-	.	ID=FBgn0039505.1.mrna1;geneID=FBgn0039505.1.path1;Name=FBgn0039505.1;Dir=sensecoverage=100.0;identity=99.8;matches=416;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019038
Chr2	stalkie_big_nohaplotig	exon	83681250	83681590	99	-	.	Parent=FBgn0039505.1.mrna1;Target=FBgn0039505.1 77 417 +
Chr2	stalkie_big_nohaplotig	exon	83681656	83681731	100	-	.	Parent=FBgn0039505.1.mrna1;Target=FBgn0039505.1 1 76 +
Chr2	stalkie_big_nohaplotig	CDS	83681250	83681590	.	-	2	Parent=FBgn0039505.1.mrna1;Target=FBgn0039505.1 77 417 +
Chr2	stalkie_big_nohaplotig	CDS	83681656	83681731	.	-	0	Parent=FBgn0039505.1.mrna1;Target=FBgn0039505.1 1 76 +
Chr2	gffcl	locus	83693940	83695255	.	-	.	ID=RLOC_00019040;geneIDs=comp159421_c0_seq1.path1;transcripts=comp159421_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83693940	83695255	.	-	.	ID=comp159421_c0_seq1.mrna1;geneID=comp159421_c0_seq1.path1;Name=comp159421_c0_seq1;Dir=indeterminatecoverage=99.2;identity=98.1;matches=1292;mismatches=23;indels=2;unknowns=0;Target=comp159421_c0_seq1 1326 11 .;CDS_Target=comp159421_c0_seq1 1097 846 .;locus=RLOC_00019040
Chr2	stalkie_big_nohaplotig	exon	83693940	83695255	98	-	.	Parent=comp159421_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83694169	83694420	.	-	0	Parent=comp159421_c0_seq1.mrna1
Chr2	gffcl	locus	83698109	83714788	.	+	.	ID=RLOC_00019041;geneIDs=FBgn0010328.1.path1;transcripts=FBgn0010328.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83698109	83714788	.	+	.	ID=FBgn0010328.1.mrna1;geneID=FBgn0010328.1.path1;Name=FBgn0010328.1;Dir=sensecoverage=100.0;identity=96.1;matches=5103;mismatches=84;indels=123;unknowns=0;locus=RLOC_00019041
Chr2	stalkie_big_nohaplotig	exon	83698109	83699321	96	+	.	Parent=FBgn0010328.1.mrna1;Target=FBgn0010328.1 1 1243 +
Chr2	stalkie_big_nohaplotig	exon	83699389	83699622	99	+	.	Parent=FBgn0010328.1.mrna1;Target=FBgn0010328.1 1244 1477 +
Chr2	stalkie_big_nohaplotig	exon	83701909	83701974	100	+	.	Parent=FBgn0010328.1.mrna1;Target=FBgn0010328.1 1478 1543 +
Chr2	stalkie_big_nohaplotig	exon	83702135	83703867	99	+	.	Parent=FBgn0010328.1.mrna1;Target=FBgn0010328.1 1544 3276 +
Chr2	stalkie_big_nohaplotig	exon	83708258	83709262	93	+	.	Parent=FBgn0010328.1.mrna1;Target=FBgn0010328.1 3277 4319 +
Chr2	stalkie_big_nohaplotig	exon	83709372	83709650	73	+	.	Parent=FBgn0010328.1.mrna1;Target=FBgn0010328.1 4386 4707 +
Chr2	stalkie_big_nohaplotig	exon	83711144	83711282	95	+	.	Parent=FBgn0010328.1.mrna1;Target=FBgn0010328.1 4708 4846 +
Chr2	stalkie_big_nohaplotig	exon	83712039	83712160	100	+	.	Parent=FBgn0010328.1.mrna1;Target=FBgn0010328.1 4847 4968 +
Chr2	stalkie_big_nohaplotig	exon	83712222	83712351	100	+	.	Parent=FBgn0010328.1.mrna1;Target=FBgn0010328.1 4969 5098 +
Chr2	stalkie_big_nohaplotig	exon	83714452	83714551	100	+	.	Parent=FBgn0010328.1.mrna1;Target=FBgn0010328.1 5099 5198 +
Chr2	stalkie_big_nohaplotig	exon	83714617	83714788	100	+	.	Parent=FBgn0010328.1.mrna1;Target=FBgn0010328.1 5199 5370 +
Chr2	stalkie_big_nohaplotig	CDS	83698109	83699321	.	+	0	Parent=FBgn0010328.1.mrna1;Target=FBgn0010328.1 1 1243 +
Chr2	stalkie_big_nohaplotig	CDS	83699389	83699622	.	+	2	Parent=FBgn0010328.1.mrna1;Target=FBgn0010328.1 1244 1477 +
Chr2	stalkie_big_nohaplotig	CDS	83701909	83701974	.	+	2	Parent=FBgn0010328.1.mrna1;Target=FBgn0010328.1 1478 1543 +
Chr2	stalkie_big_nohaplotig	CDS	83702135	83703867	.	+	2	Parent=FBgn0010328.1.mrna1;Target=FBgn0010328.1 1544 3276 +
Chr2	stalkie_big_nohaplotig	CDS	83708258	83709262	.	+	0	Parent=FBgn0010328.1.mrna1;Target=FBgn0010328.1 3277 4319 +
Chr2	stalkie_big_nohaplotig	CDS	83709372	83709650	.	+	0	Parent=FBgn0010328.1.mrna1;Target=FBgn0010328.1 4386 4707 +
Chr2	stalkie_big_nohaplotig	CDS	83711144	83711282	.	+	0	Parent=FBgn0010328.1.mrna1;Target=FBgn0010328.1 4708 4846 +
Chr2	stalkie_big_nohaplotig	CDS	83712039	83712160	.	+	2	Parent=FBgn0010328.1.mrna1;Target=FBgn0010328.1 4847 4968 +
Chr2	stalkie_big_nohaplotig	CDS	83712222	83712351	.	+	0	Parent=FBgn0010328.1.mrna1;Target=FBgn0010328.1 4969 5098 +
Chr2	stalkie_big_nohaplotig	CDS	83714452	83714551	.	+	2	Parent=FBgn0010328.1.mrna1;Target=FBgn0010328.1 5099 5198 +
Chr2	stalkie_big_nohaplotig	CDS	83714617	83714788	.	+	1	Parent=FBgn0010328.1.mrna1;Target=FBgn0010328.1 5199 5370 +
Chr2	gffcl	locus	83715911	83737524	.	-	.	ID=RLOC_00019042;geneIDs=FBgn0011289.1.path2,FBgn0011289.2.path1,comp156044_c0_seq1.path1,comp162012_c0_seq1.path1;transcripts=comp156044_c0_seq1.mrna1,FBgn0011289.2.mrna1,comp162012_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83715911	83737524	.	-	.	ID=comp156044_c0_seq1.mrna1;geneID=comp156044_c0_seq1.path1;Name=comp156044_c0_seq1;Dir=sensecoverage=99.0;identity=99.8;matches=2133;mismatches=4;indels=0;unknowns=0;locus=RLOC_00019042
Chr2	stalkie_big_nohaplotig	exon	83715911	83716414	100	-	.	Parent=comp156044_c0_seq1.mrna1;Target=comp156044_c0_seq1 1634 2137 +
Chr2	stalkie_big_nohaplotig	exon	83716482	83716723	100	-	.	Parent=comp156044_c0_seq1.mrna1;Target=comp156044_c0_seq1 1392 1633 +
Chr2	stalkie_big_nohaplotig	exon	83718280	83718487	98	-	.	Parent=comp156044_c0_seq1.mrna1;Target=comp156044_c0_seq1 1184 1391 +
Chr2	stalkie_big_nohaplotig	exon	83718582	83718992	100	-	.	Parent=comp156044_c0_seq1.mrna1;Target=comp156044_c0_seq1 773 1183 +
Chr2	stalkie_big_nohaplotig	exon	83722208	83722216	100	-	.	Parent=comp156044_c0_seq1.mrna1;Target=comp156044_c0_seq1 764 772 +
Chr2	stalkie_big_nohaplotig	exon	83725090	83725287	100	-	.	Parent=comp156044_c0_seq1.mrna1;Target=comp156044_c0_seq1 566 763 +
Chr2	stalkie_big_nohaplotig	exon	83736960	83737524	99	-	.	Parent=comp156044_c0_seq1.mrna1;Target=comp156044_c0_seq1 1 565 +
Chr2	stalkie_big_nohaplotig	CDS	83716307	83716414	.	-	0	Parent=comp156044_c0_seq1.mrna1;Target=comp156044_c0_seq1 1634 1741 +
Chr2	stalkie_big_nohaplotig	CDS	83716482	83716723	.	-	2	Parent=comp156044_c0_seq1.mrna1;Target=comp156044_c0_seq1 1392 1633 +
Chr2	stalkie_big_nohaplotig	CDS	83718280	83718487	.	-	0	Parent=comp156044_c0_seq1.mrna1;Target=comp156044_c0_seq1 1184 1391 +
Chr2	stalkie_big_nohaplotig	CDS	83718582	83718992	.	-	0	Parent=comp156044_c0_seq1.mrna1;Target=comp156044_c0_seq1 773 1183 +
Chr2	stalkie_big_nohaplotig	CDS	83722208	83722216	.	-	0	Parent=comp156044_c0_seq1.mrna1;Target=comp156044_c0_seq1 764 772 +
Chr2	stalkie_big_nohaplotig	CDS	83725090	83725287	.	-	0	Parent=comp156044_c0_seq1.mrna1;Target=comp156044_c0_seq1 566 763 +
Chr2	stalkie_big_nohaplotig	CDS	83736960	83736983	.	-	0	Parent=comp156044_c0_seq1.mrna1;Target=comp156044_c0_seq1 542 565 +
Chr2	stalkie_big_nohaplotig	mRNA	83716310	83737046	.	-	.	ID=FBgn0011289.2.mrna1;geneID=FBgn0011289.2.path1;Name=FBgn0011289.2;Dir=sensecoverage=100.0;identity=99.7;matches=1113;mismatches=3;indels=0;unknowns=0;locus=RLOC_00019042
Chr2	stalkie_big_nohaplotig	exon	83716310	83716414	100	-	.	Parent=FBgn0011289.2.mrna1;Target=FBgn0011289.2 1012 1116 +
Chr2	stalkie_big_nohaplotig	exon	83716482	83716723	100	-	.	Parent=FBgn0011289.2.mrna1;Target=FBgn0011289.2 770 1011 +
Chr2	stalkie_big_nohaplotig	exon	83718280	83718487	98	-	.	Parent=FBgn0011289.2.mrna1;Target=FBgn0011289.2 562 769 +
Chr2	stalkie_big_nohaplotig	exon	83718582	83718658	100	-	.	Parent=FBgn0011289.2.mrna1;Target=FBgn0011289.2 485 561 +
Chr2	stalkie_big_nohaplotig	exon	83718803	83718992	100	-	.	Parent=FBgn0011289.2.mrna1;Target=FBgn0011289.2 295 484 +
Chr2	stalkie_big_nohaplotig	exon	83722208	83722216	100	-	.	Parent=FBgn0011289.2.mrna1;Target=FBgn0011289.2 286 294 +
Chr2	stalkie_big_nohaplotig	exon	83725090	83725287	100	-	.	Parent=FBgn0011289.2.mrna1;Target=FBgn0011289.2 88 285 +
Chr2	stalkie_big_nohaplotig	exon	83736960	83737046	100	-	.	Parent=FBgn0011289.2.mrna1;Target=FBgn0011289.2 1 87 +
Chr2	stalkie_big_nohaplotig	CDS	83716310	83716414	.	-	0	Parent=FBgn0011289.2.mrna1;Target=FBgn0011289.2 1012 1116 +
Chr2	stalkie_big_nohaplotig	CDS	83716482	83716723	.	-	2	Parent=FBgn0011289.2.mrna1;Target=FBgn0011289.2 770 1011 +
Chr2	stalkie_big_nohaplotig	CDS	83718280	83718487	.	-	0	Parent=FBgn0011289.2.mrna1;Target=FBgn0011289.2 562 769 +
Chr2	stalkie_big_nohaplotig	CDS	83718582	83718658	.	-	2	Parent=FBgn0011289.2.mrna1;Target=FBgn0011289.2 485 561 +
Chr2	stalkie_big_nohaplotig	CDS	83718803	83718992	.	-	0	Parent=FBgn0011289.2.mrna1;Target=FBgn0011289.2 295 484 +
Chr2	stalkie_big_nohaplotig	CDS	83722208	83722216	.	-	0	Parent=FBgn0011289.2.mrna1;Target=FBgn0011289.2 286 294 +
Chr2	stalkie_big_nohaplotig	CDS	83725090	83725287	.	-	0	Parent=FBgn0011289.2.mrna1;Target=FBgn0011289.2 88 285 +
Chr2	stalkie_big_nohaplotig	CDS	83736960	83737046	.	-	0	Parent=FBgn0011289.2.mrna1;Target=FBgn0011289.2 1 87 +
Chr2	stalkie_big_nohaplotig	mRNA	83720409	83722605	.	-	.	ID=comp162012_c0_seq1.mrna1;geneID=comp162012_c0_seq1.path1;Name=comp162012_c0_seq1;Dir=indeterminatecoverage=99.7;identity=94.6;matches=2117;mismatches=40;indels=82;unknowns=0;Target=comp162012_c0_seq1 2205 7 .;CDS_Target=comp162012_c0_seq1 775 671 .;locus=RLOC_00019042
Chr2	stalkie_big_nohaplotig	exon	83720409	83722605	94	-	.	Parent=comp162012_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83721838	83721942	.	-	0	Parent=comp162012_c0_seq1.mrna1
Chr2	gffcl	locus	83738974	83740111	.	+	.	ID=RLOC_00019043;geneIDs=FBgn0037608.1.path1;transcripts=FBgn0037608.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83738974	83740111	.	+	.	ID=FBgn0037608.1.mrna1;geneID=FBgn0037608.1.path1;Name=FBgn0037608.1;Dir=sensecoverage=100.0;identity=99.6;matches=1025;mismatches=4;indels=0;unknowns=0;locus=RLOC_00019043
Chr2	stalkie_big_nohaplotig	exon	83738974	83739157	100	+	.	Parent=FBgn0037608.1.mrna1;Target=FBgn0037608.1 1 184 +
Chr2	stalkie_big_nohaplotig	exon	83739213	83739515	99	+	.	Parent=FBgn0037608.1.mrna1;Target=FBgn0037608.1 185 487 +
Chr2	stalkie_big_nohaplotig	exon	83739570	83740111	99	+	.	Parent=FBgn0037608.1.mrna1;Target=FBgn0037608.1 488 1029 +
Chr2	stalkie_big_nohaplotig	CDS	83738974	83739157	.	+	0	Parent=FBgn0037608.1.mrna1;Target=FBgn0037608.1 1 184 +
Chr2	stalkie_big_nohaplotig	CDS	83739213	83739515	.	+	2	Parent=FBgn0037608.1.mrna1;Target=FBgn0037608.1 185 487 +
Chr2	stalkie_big_nohaplotig	CDS	83739570	83740111	.	+	2	Parent=FBgn0037608.1.mrna1;Target=FBgn0037608.1 488 1029 +
Chr2	gffcl	locus	83740883	83741904	.	-	.	ID=RLOC_00019044;geneIDs=FBgn0037609.1.path1;transcripts=FBgn0037609.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83740883	83741904	.	-	.	ID=FBgn0037609.1.mrna1;geneID=FBgn0037609.1.path1;Name=FBgn0037609.1;Dir=sensecoverage=100.0;identity=99.9;matches=839;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019044
Chr2	stalkie_big_nohaplotig	exon	83740883	83741028	100	-	.	Parent=FBgn0037609.1.mrna1;Target=FBgn0037609.1 695 840 +
Chr2	stalkie_big_nohaplotig	exon	83741087	83741446	100	-	.	Parent=FBgn0037609.1.mrna1;Target=FBgn0037609.1 335 694 +
Chr2	stalkie_big_nohaplotig	exon	83741512	83741577	100	-	.	Parent=FBgn0037609.1.mrna1;Target=FBgn0037609.1 269 334 +
Chr2	stalkie_big_nohaplotig	exon	83741637	83741904	99	-	.	Parent=FBgn0037609.1.mrna1;Target=FBgn0037609.1 1 268 +
Chr2	stalkie_big_nohaplotig	CDS	83740883	83741028	.	-	2	Parent=FBgn0037609.1.mrna1;Target=FBgn0037609.1 695 840 +
Chr2	stalkie_big_nohaplotig	CDS	83741087	83741446	.	-	2	Parent=FBgn0037609.1.mrna1;Target=FBgn0037609.1 335 694 +
Chr2	stalkie_big_nohaplotig	CDS	83741512	83741577	.	-	2	Parent=FBgn0037609.1.mrna1;Target=FBgn0037609.1 269 334 +
Chr2	stalkie_big_nohaplotig	CDS	83741637	83741904	.	-	0	Parent=FBgn0037609.1.mrna1;Target=FBgn0037609.1 1 268 +
Chr2	gffcl	locus	83743114	83746605	.	+	.	ID=RLOC_00019045;geneIDs=FBgn0011655.1.path1;transcripts=FBgn0011655.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83743114	83746605	.	+	.	ID=FBgn0011655.1.mrna1;geneID=FBgn0011655.1.path1;Name=FBgn0011655.1;Dir=sensecoverage=100.0;identity=99.8;matches=2297;mismatches=4;indels=0;unknowns=0;locus=RLOC_00019045
Chr2	stalkie_big_nohaplotig	exon	83743114	83743145	100	+	.	Parent=FBgn0011655.1.mrna1;Target=FBgn0011655.1 1 32 +
Chr2	stalkie_big_nohaplotig	exon	83743422	83743597	99	+	.	Parent=FBgn0011655.1.mrna1;Target=FBgn0011655.1 33 208 +
Chr2	stalkie_big_nohaplotig	exon	83743658	83743929	99	+	.	Parent=FBgn0011655.1.mrna1;Target=FBgn0011655.1 209 480 +
Chr2	stalkie_big_nohaplotig	exon	83744194	83744536	100	+	.	Parent=FBgn0011655.1.mrna1;Target=FBgn0011655.1 481 823 +
Chr2	stalkie_big_nohaplotig	exon	83744670	83744834	100	+	.	Parent=FBgn0011655.1.mrna1;Target=FBgn0011655.1 824 988 +
Chr2	stalkie_big_nohaplotig	exon	83744964	83745521	100	+	.	Parent=FBgn0011655.1.mrna1;Target=FBgn0011655.1 989 1546 +
Chr2	stalkie_big_nohaplotig	exon	83745588	83745840	99	+	.	Parent=FBgn0011655.1.mrna1;Target=FBgn0011655.1 1547 1799 +
Chr2	stalkie_big_nohaplotig	exon	83745922	83746090	100	+	.	Parent=FBgn0011655.1.mrna1;Target=FBgn0011655.1 1800 1968 +
Chr2	stalkie_big_nohaplotig	exon	83746149	83746275	100	+	.	Parent=FBgn0011655.1.mrna1;Target=FBgn0011655.1 1969 2095 +
Chr2	stalkie_big_nohaplotig	exon	83746400	83746605	99	+	.	Parent=FBgn0011655.1.mrna1;Target=FBgn0011655.1 2096 2301 +
Chr2	stalkie_big_nohaplotig	CDS	83743114	83743145	.	+	0	Parent=FBgn0011655.1.mrna1;Target=FBgn0011655.1 1 32 +
Chr2	stalkie_big_nohaplotig	CDS	83743422	83743597	.	+	1	Parent=FBgn0011655.1.mrna1;Target=FBgn0011655.1 33 208 +
Chr2	stalkie_big_nohaplotig	CDS	83743658	83743929	.	+	2	Parent=FBgn0011655.1.mrna1;Target=FBgn0011655.1 209 480 +
Chr2	stalkie_big_nohaplotig	CDS	83744194	83744536	.	+	0	Parent=FBgn0011655.1.mrna1;Target=FBgn0011655.1 481 823 +
Chr2	stalkie_big_nohaplotig	CDS	83744670	83744834	.	+	2	Parent=FBgn0011655.1.mrna1;Target=FBgn0011655.1 824 988 +
Chr2	stalkie_big_nohaplotig	CDS	83744964	83745521	.	+	2	Parent=FBgn0011655.1.mrna1;Target=FBgn0011655.1 989 1546 +
Chr2	stalkie_big_nohaplotig	CDS	83745588	83745840	.	+	2	Parent=FBgn0011655.1.mrna1;Target=FBgn0011655.1 1547 1799 +
Chr2	stalkie_big_nohaplotig	CDS	83745922	83746090	.	+	1	Parent=FBgn0011655.1.mrna1;Target=FBgn0011655.1 1800 1968 +
Chr2	stalkie_big_nohaplotig	CDS	83746149	83746275	.	+	0	Parent=FBgn0011655.1.mrna1;Target=FBgn0011655.1 1969 2095 +
Chr2	stalkie_big_nohaplotig	CDS	83746400	83746605	.	+	2	Parent=FBgn0011655.1.mrna1;Target=FBgn0011655.1 2096 2301 +
Chr2	gffcl	locus	83747131	83747767	.	-	.	ID=RLOC_00019046;geneIDs=FBgn0039859.1.path1;transcripts=FBgn0039859.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83747131	83747767	.	-	.	ID=FBgn0039859.1.mrna1;geneID=FBgn0039859.1.path1;Name=FBgn0039859.1;Dir=indeterminatecoverage=98.3;identity=98.9;matches=630;mismatches=7;indels=0;unknowns=0;Target=FBgn0039859.1 648 12 .;CDS_Target=FBgn0039859.1 648 13 .;locus=RLOC_00019046
Chr2	stalkie_big_nohaplotig	exon	83747131	83747767	98	-	.	Parent=FBgn0039859.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83747131	83747766	.	-	0	Parent=FBgn0039859.1.mrna1
Chr2	gffcl	locus	83750475	83756673	.	+	.	ID=RLOC_00019047;geneIDs=FBgn0039861.1.path1;transcripts=FBgn0039861.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83750475	83756673	.	+	.	ID=FBgn0039861.1.mrna1;geneID=FBgn0039861.1.path1;Name=FBgn0039861.1;Dir=sensecoverage=100.0;identity=99.5;matches=1531;mismatches=8;indels=0;unknowns=0;locus=RLOC_00019047
Chr2	stalkie_big_nohaplotig	exon	83750475	83750703	100	+	.	Parent=FBgn0039861.1.mrna1;Target=FBgn0039861.1 1 229 +
Chr2	stalkie_big_nohaplotig	exon	83751336	83751506	100	+	.	Parent=FBgn0039861.1.mrna1;Target=FBgn0039861.1 230 400 +
Chr2	stalkie_big_nohaplotig	exon	83751589	83751731	99	+	.	Parent=FBgn0039861.1.mrna1;Target=FBgn0039861.1 401 543 +
Chr2	stalkie_big_nohaplotig	exon	83751796	83752000	99	+	.	Parent=FBgn0039861.1.mrna1;Target=FBgn0039861.1 544 748 +
Chr2	stalkie_big_nohaplotig	exon	83755795	83756420	99	+	.	Parent=FBgn0039861.1.mrna1;Target=FBgn0039861.1 749 1374 +
Chr2	stalkie_big_nohaplotig	exon	83756509	83756673	98	+	.	Parent=FBgn0039861.1.mrna1;Target=FBgn0039861.1 1375 1539 +
Chr2	stalkie_big_nohaplotig	CDS	83750475	83750703	.	+	0	Parent=FBgn0039861.1.mrna1;Target=FBgn0039861.1 1 229 +
Chr2	stalkie_big_nohaplotig	CDS	83751336	83751506	.	+	2	Parent=FBgn0039861.1.mrna1;Target=FBgn0039861.1 230 400 +
Chr2	stalkie_big_nohaplotig	CDS	83751589	83751731	.	+	2	Parent=FBgn0039861.1.mrna1;Target=FBgn0039861.1 401 543 +
Chr2	stalkie_big_nohaplotig	CDS	83751796	83752000	.	+	0	Parent=FBgn0039861.1.mrna1;Target=FBgn0039861.1 544 748 +
Chr2	stalkie_big_nohaplotig	CDS	83755795	83756420	.	+	2	Parent=FBgn0039861.1.mrna1;Target=FBgn0039861.1 749 1374 +
Chr2	stalkie_big_nohaplotig	CDS	83756509	83756673	.	+	0	Parent=FBgn0039861.1.mrna1;Target=FBgn0039861.1 1375 1539 +
Chr2	stalkie_big_nohaplotig	mRNA	83765456	83766297	.	-	.	ID=comp151218_c0_seq1.mrna1;geneID=comp151218_c0_seq1.path1;Name=comp151218_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.6;matches=831;mismatches=11;indels=1;unknowns=0;Target=comp151218_c0_seq1 845 3 .;CDS_Target=comp151218_c0_seq1 12 4 .;locus=RLOC_00019048
Chr2	stalkie_big_nohaplotig	exon	83765456	83766297	98	-	.	Parent=comp151218_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83766288	83766296	.	-	0	Parent=comp151218_c0_seq1.mrna1
Chr2	gffcl	locus	83779657	83780272	.	+	.	ID=RLOC_00019049;geneIDs=comp61688_c0_seq1.path1;transcripts=comp61688_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83779657	83780272	.	+	.	ID=comp61688_c0_seq1.mrna1;geneID=comp61688_c0_seq1.path1;Name=comp61688_c0_seq1;Dir=indeterminatecoverage=98.2;identity=99.8;matches=615;mismatches=1;indels=0;unknowns=0;Target=comp61688_c0_seq1 627 12 .;CDS_Target=comp61688_c0_seq1 154 14 .;locus=RLOC_00019049
Chr2	stalkie_big_nohaplotig	exon	83779657	83780272	99	+	.	Parent=comp61688_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83779659	83779799	.	+	0	Parent=comp61688_c0_seq1.mrna1
Chr2	gffcl	locus	83782396	83787272	.	-	.	ID=RLOC_00019050;geneIDs=FBgn0039864.1.path1;transcripts=FBgn0039864.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83782396	83787272	.	-	.	ID=FBgn0039864.1.mrna1;geneID=FBgn0039864.1.path1;Name=FBgn0039864.1;Dir=sensecoverage=100.0;identity=99.9;matches=908;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019050
Chr2	stalkie_big_nohaplotig	exon	83782396	83782547	100	-	.	Parent=FBgn0039864.1.mrna1;Target=FBgn0039864.1 758 909 +
Chr2	stalkie_big_nohaplotig	exon	83782771	83782984	100	-	.	Parent=FBgn0039864.1.mrna1;Target=FBgn0039864.1 544 757 +
Chr2	stalkie_big_nohaplotig	exon	83783060	83783204	100	-	.	Parent=FBgn0039864.1.mrna1;Target=FBgn0039864.1 399 543 +
Chr2	stalkie_big_nohaplotig	exon	83786803	83786910	100	-	.	Parent=FBgn0039864.1.mrna1;Target=FBgn0039864.1 291 398 +
Chr2	stalkie_big_nohaplotig	exon	83786983	83787272	99	-	.	Parent=FBgn0039864.1.mrna1;Target=FBgn0039864.1 1 290 +
Chr2	stalkie_big_nohaplotig	CDS	83782396	83782547	.	-	2	Parent=FBgn0039864.1.mrna1;Target=FBgn0039864.1 758 909 +
Chr2	stalkie_big_nohaplotig	CDS	83782771	83782984	.	-	0	Parent=FBgn0039864.1.mrna1;Target=FBgn0039864.1 544 757 +
Chr2	stalkie_big_nohaplotig	CDS	83783060	83783204	.	-	1	Parent=FBgn0039864.1.mrna1;Target=FBgn0039864.1 399 543 +
Chr2	stalkie_big_nohaplotig	CDS	83786803	83786910	.	-	1	Parent=FBgn0039864.1.mrna1;Target=FBgn0039864.1 291 398 +
Chr2	stalkie_big_nohaplotig	CDS	83786983	83787272	.	-	0	Parent=FBgn0039864.1.mrna1;Target=FBgn0039864.1 1 290 +
Chr2	gffcl	locus	83783583	83785053	.	+	.	ID=RLOC_00019051;geneIDs=comp157784_c0_seq1.path1;transcripts=comp157784_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83783583	83785053	.	+	.	ID=comp157784_c0_seq1.mrna1;geneID=comp157784_c0_seq1.path1;Name=comp157784_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=1447;mismatches=19;indels=5;unknowns=0;Target=comp157784_c0_seq1 1466 1 .;CDS_Target=comp157784_c0_seq1 752 489 .;locus=RLOC_00019051
Chr2	stalkie_big_nohaplotig	exon	83783583	83785053	98	+	.	Parent=comp157784_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83784071	83784334	.	+	0	Parent=comp157784_c0_seq1.mrna1
Chr2	gffcl	locus	83882760	83883265	.	+	.	ID=RLOC_00019052;geneIDs=comp135048_c0_seq1.path1;transcripts=comp135048_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83882760	83883265	.	+	.	ID=comp135048_c0_seq1.mrna1;geneID=comp135048_c0_seq1.path1;Name=comp135048_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=498;mismatches=5;indels=6;unknowns=0;Target=comp135048_c0_seq1 506 1 .;CDS_Target=comp135048_c0_seq1 248 180 .;locus=RLOC_00019052
Chr2	stalkie_big_nohaplotig	exon	83882760	83883265	97	+	.	Parent=comp135048_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83882939	83883007	.	+	0	Parent=comp135048_c0_seq1.mrna1
Chr2	gffcl	locus	83925930	83926819	.	+	.	ID=RLOC_00019053;geneIDs=comp47216_c0_seq1.path1;transcripts=comp47216_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83925930	83926819	.	+	.	ID=comp47216_c0_seq1.mrna1;geneID=comp47216_c0_seq1.path1;Name=comp47216_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=890;mismatches=0;indels=0;unknowns=0;Target=comp47216_c0_seq1 893 4 .;CDS_Target=comp47216_c0_seq1 181 5 .;locus=RLOC_00019053
Chr2	stalkie_big_nohaplotig	exon	83925930	83926819	100	+	.	Parent=comp47216_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83925931	83926107	.	+	0	Parent=comp47216_c0_seq1.mrna1
Chr2	gffcl	locus	83943454	83943818	.	-	.	ID=RLOC_00019054;geneIDs=comp130704_c0_seq1.path1;transcripts=comp130704_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83943454	83943818	.	-	.	ID=comp130704_c0_seq1.mrna1;geneID=comp130704_c0_seq1.path1;Name=comp130704_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=364;mismatches=1;indels=0;unknowns=0;Target=comp130704_c0_seq1 365 1 .;CDS_Target=comp130704_c0_seq1 161 3 .;locus=RLOC_00019054
Chr2	stalkie_big_nohaplotig	exon	83943454	83943818	99	-	.	Parent=comp130704_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83943658	83943816	.	-	0	Parent=comp130704_c0_seq1.mrna1
Chr2	gffcl	locus	83945157	83951451	.	+	.	ID=RLOC_00019055;geneIDs=FBgn0003870.1.path1;transcripts=FBgn0003870.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83945157	83951451	.	+	.	ID=FBgn0003870.1.mrna1;geneID=FBgn0003870.1.path1;Name=FBgn0003870.1;Dir=sensecoverage=100.0;identity=99.9;matches=1893;mismatches=0;indels=1;unknowns=0;locus=RLOC_00019055
Chr2	stalkie_big_nohaplotig	exon	83945157	83945324	100	+	.	Parent=FBgn0003870.1.mrna1;Target=FBgn0003870.1 1 168 +
Chr2	stalkie_big_nohaplotig	exon	83945664	83946168	99	+	.	Parent=FBgn0003870.1.mrna1;Target=FBgn0003870.1 169 672 +
Chr2	stalkie_big_nohaplotig	exon	83946236	83946340	100	+	.	Parent=FBgn0003870.1.mrna1;Target=FBgn0003870.1 673 777 +
Chr2	stalkie_big_nohaplotig	exon	83947714	83947804	100	+	.	Parent=FBgn0003870.1.mrna1;Target=FBgn0003870.1 778 868 +
Chr2	stalkie_big_nohaplotig	exon	83949102	83949535	100	+	.	Parent=FBgn0003870.1.mrna1;Target=FBgn0003870.1 869 1302 +
Chr2	stalkie_big_nohaplotig	exon	83950861	83951451	100	+	.	Parent=FBgn0003870.1.mrna1;Target=FBgn0003870.1 1303 1893 +
Chr2	stalkie_big_nohaplotig	CDS	83946028	83946168	.	+	0	Parent=FBgn0003870.1.mrna1;Target=FBgn0003870.1 532 672 +
Chr2	stalkie_big_nohaplotig	CDS	83946236	83946340	.	+	0	Parent=FBgn0003870.1.mrna1;Target=FBgn0003870.1 673 777 +
Chr2	stalkie_big_nohaplotig	CDS	83947714	83947804	.	+	0	Parent=FBgn0003870.1.mrna1;Target=FBgn0003870.1 778 868 +
Chr2	stalkie_big_nohaplotig	CDS	83949102	83949535	.	+	2	Parent=FBgn0003870.1.mrna1;Target=FBgn0003870.1 869 1302 +
Chr2	stalkie_big_nohaplotig	CDS	83950861	83951451	.	+	0	Parent=FBgn0003870.1.mrna1;Target=FBgn0003870.1 1303 1893 +
Chr2	gffcl	locus	83954226	83954620	.	+	.	ID=RLOC_00019056;geneIDs=comp144107_c1_seq1.path1;transcripts=comp144107_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83954226	83954620	.	+	.	ID=comp144107_c1_seq1.mrna1;geneID=comp144107_c1_seq1.path1;Name=comp144107_c1_seq1;Dir=indeterminatecoverage=88.2;identity=99.0;matches=391;mismatches=4;indels=0;unknowns=0;Target=comp144107_c1_seq1 398 4 .;CDS_Target=comp144107_c1_seq1 155 6 .;locus=RLOC_00019056
Chr2	stalkie_big_nohaplotig	exon	83954226	83954620	98	+	.	Parent=comp144107_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83954228	83954377	.	+	0	Parent=comp144107_c1_seq1.mrna1
Chr2	gffcl	locus	83957761	83958514	.	-	.	ID=RLOC_00019057;geneIDs=comp158363_c0_seq1.path1;transcripts=comp158363_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83957761	83958514	.	-	.	ID=comp158363_c0_seq1.mrna1;geneID=comp158363_c0_seq1.path1;Name=comp158363_c0_seq1;Dir=indeterminatecoverage=99.2;identity=98.4;matches=742;mismatches=12;indels=0;unknowns=0;Target=comp158363_c0_seq1 754 1 .;CDS_Target=comp158363_c0_seq1 109 17 .;locus=RLOC_00019057
Chr2	stalkie_big_nohaplotig	exon	83957761	83958514	98	-	.	Parent=comp158363_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83958406	83958498	.	-	0	Parent=comp158363_c0_seq1.mrna1
Chr2	gffcl	locus	83960059	83961447	.	-	.	ID=RLOC_00019058;geneIDs=FBgn0039867.1.path1;transcripts=FBgn0039867.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83960059	83961447	.	-	.	ID=FBgn0039867.1.mrna1;geneID=FBgn0039867.1.path1;Name=FBgn0039867.1;Dir=sensecoverage=100.0;identity=99.9;matches=1271;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019058
Chr2	stalkie_big_nohaplotig	exon	83960059	83960394	99	-	.	Parent=FBgn0039867.1.mrna1;Target=FBgn0039867.1 937 1272 +
Chr2	stalkie_big_nohaplotig	exon	83960459	83961323	100	-	.	Parent=FBgn0039867.1.mrna1;Target=FBgn0039867.1 72 936 +
Chr2	stalkie_big_nohaplotig	exon	83961377	83961447	100	-	.	Parent=FBgn0039867.1.mrna1;Target=FBgn0039867.1 1 71 +
Chr2	stalkie_big_nohaplotig	CDS	83960059	83960394	.	-	0	Parent=FBgn0039867.1.mrna1;Target=FBgn0039867.1 937 1272 +
Chr2	stalkie_big_nohaplotig	CDS	83960459	83961323	.	-	1	Parent=FBgn0039867.1.mrna1;Target=FBgn0039867.1 72 936 +
Chr2	stalkie_big_nohaplotig	CDS	83961377	83961447	.	-	0	Parent=FBgn0039867.1.mrna1;Target=FBgn0039867.1 1 71 +
Chr2	gffcl	locus	83962554	83964661	.	+	.	ID=RLOC_00019059;geneIDs=FBgn0039868.1.path1;transcripts=FBgn0039868.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83962554	83964661	.	+	.	ID=FBgn0039868.1.mrna1;geneID=FBgn0039868.1.path1;Name=FBgn0039868.1;Dir=sensecoverage=100.0;identity=99.6;matches=771;mismatches=3;indels=0;unknowns=0;locus=RLOC_00019059
Chr2	stalkie_big_nohaplotig	exon	83962554	83962831	99	+	.	Parent=FBgn0039868.1.mrna1;Target=FBgn0039868.1 1 278 +
Chr2	stalkie_big_nohaplotig	exon	83962898	83963155	99	+	.	Parent=FBgn0039868.1.mrna1;Target=FBgn0039868.1 279 536 +
Chr2	stalkie_big_nohaplotig	exon	83964424	83964661	100	+	.	Parent=FBgn0039868.1.mrna1;Target=FBgn0039868.1 537 774 +
Chr2	stalkie_big_nohaplotig	CDS	83962554	83962831	.	+	0	Parent=FBgn0039868.1.mrna1;Target=FBgn0039868.1 1 278 +
Chr2	stalkie_big_nohaplotig	CDS	83962898	83963155	.	+	1	Parent=FBgn0039868.1.mrna1;Target=FBgn0039868.1 279 536 +
Chr2	stalkie_big_nohaplotig	CDS	83964424	83964661	.	+	1	Parent=FBgn0039868.1.mrna1;Target=FBgn0039868.1 537 774 +
Chr2	gffcl	locus	83971328	83972100	.	+	.	ID=RLOC_00019060;geneIDs=comp147071_c0_seq1.path1;transcripts=comp147071_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83971328	83972100	.	+	.	ID=comp147071_c0_seq1.mrna1;geneID=comp147071_c0_seq1.path1;Name=comp147071_c0_seq1;Dir=indeterminatecoverage=99.8;identity=94.7;matches=756;mismatches=17;indels=25;unknowns=0;Target=comp147071_c0_seq1 798 1 .;CDS_Target=comp147071_c0_seq1 237 151 .;locus=RLOC_00019060
Chr2	stalkie_big_nohaplotig	exon	83971328	83972100	94	+	.	Parent=comp147071_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83971478	83971564	.	+	0	Parent=comp147071_c0_seq1.mrna1
Chr2	gffcl	locus	83973405	83975072	.	-	.	ID=RLOC_00019061;geneIDs=comp160683_c0_seq1.path1;transcripts=comp160683_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83973405	83975072	.	-	.	ID=comp160683_c0_seq1.mrna1;geneID=comp160683_c0_seq1.path1;Name=comp160683_c0_seq1;Dir=indeterminatecoverage=99.7;identity=96.7;matches=1509;mismatches=42;indels=10;unknowns=0;Target=comp160683_c0_seq1 1238 1113 .;locus=RLOC_00019061
Chr2	stalkie_big_nohaplotig	exon	83973405	83973964	93	-	.	Parent=comp160683_c0_seq1.mrna1;Target=comp160683_c0_seq1 1556 1002 .
Chr2	stalkie_big_nohaplotig	exon	83974077	83975072	98	-	.	Parent=comp160683_c0_seq1.mrna1;Target=comp160683_c0_seq1 1001 1 .
Chr2	stalkie_big_nohaplotig	CDS	83973723	83973848	.	-	0	Parent=comp160683_c0_seq1.mrna1
Chr2	gffcl	locus	83975251	83975572	.	-	.	ID=RLOC_00019062;geneIDs=comp136615_c0_seq1.path1;transcripts=comp136615_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83975251	83975572	.	-	.	ID=comp136615_c0_seq1.mrna1;geneID=comp136615_c0_seq1.path1;Name=comp136615_c0_seq1;Dir=indeterminatecoverage=96.7;identity=94.5;matches=311;mismatches=4;indels=14;unknowns=0;Target=comp136615_c0_seq1 322 1 .;CDS_Target=comp136615_c0_seq1 49 2 .;locus=RLOC_00019062
Chr2	stalkie_big_nohaplotig	exon	83975251	83975572	94	-	.	Parent=comp136615_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83975524	83975571	.	-	0	Parent=comp136615_c0_seq1.mrna1
Chr2	gffcl	locus	83975781	83979332	.	+	.	ID=RLOC_00019063;geneIDs=FBgn0000557.1.path1;transcripts=FBgn0000557.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83975781	83979332	.	+	.	ID=FBgn0000557.1.mrna1;geneID=FBgn0000557.1.path1;Name=FBgn0000557.1;Dir=sensecoverage=100.0;identity=99.7;matches=1385;mismatches=4;indels=0;unknowns=0;locus=RLOC_00019063
Chr2	stalkie_big_nohaplotig	exon	83975781	83976606	99	+	.	Parent=FBgn0000557.1.mrna1;Target=FBgn0000557.1 1 826 +
Chr2	stalkie_big_nohaplotig	exon	83976895	83977100	100	+	.	Parent=FBgn0000557.1.mrna1;Target=FBgn0000557.1 827 1032 +
Chr2	stalkie_big_nohaplotig	exon	83978976	83979332	99	+	.	Parent=FBgn0000557.1.mrna1;Target=FBgn0000557.1 1033 1389 +
Chr2	stalkie_big_nohaplotig	CDS	83975781	83976606	.	+	0	Parent=FBgn0000557.1.mrna1;Target=FBgn0000557.1 1 826 +
Chr2	stalkie_big_nohaplotig	CDS	83976895	83977100	.	+	2	Parent=FBgn0000557.1.mrna1;Target=FBgn0000557.1 827 1032 +
Chr2	stalkie_big_nohaplotig	CDS	83978976	83979332	.	+	0	Parent=FBgn0000557.1.mrna1;Target=FBgn0000557.1 1033 1389 +
Chr2	gffcl	locus	83978094	83978562	.	+	.	ID=RLOC_00019064;geneIDs=comp143851_c1_seq1.path1;transcripts=comp143851_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83978094	83978562	.	+	.	ID=comp143851_c1_seq1.mrna1;geneID=comp143851_c1_seq1.path1;Name=comp143851_c1_seq1;Dir=indeterminatecoverage=99.8;identity=98.5;matches=462;mismatches=7;indels=0;unknowns=0;Target=comp143851_c1_seq1 469 1 .;CDS_Target=comp143851_c1_seq1 190 2 .;locus=RLOC_00019064
Chr2	stalkie_big_nohaplotig	exon	83978094	83978562	98	+	.	Parent=comp143851_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83978095	83978283	.	+	0	Parent=comp143851_c1_seq1.mrna1
Chr2	gffcl	locus	83982913	83983336	.	+	.	ID=RLOC_00019065;geneIDs=FBgn0039869.1.path1;transcripts=FBgn0039869.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83982913	83983336	.	+	.	ID=FBgn0039869.1.mrna1;geneID=FBgn0039869.1.path1;Name=FBgn0039869.1;Dir=sensecoverage=99.7;identity=99.7;matches=337;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019065
Chr2	stalkie_big_nohaplotig	exon	83982913	83983123	99	+	.	Parent=FBgn0039869.1.mrna1;Target=FBgn0039869.1 2 212 +
Chr2	stalkie_big_nohaplotig	exon	83983210	83983336	100	+	.	Parent=FBgn0039869.1.mrna1;Target=FBgn0039869.1 213 339 +
Chr2	stalkie_big_nohaplotig	CDS	83982915	83983123	.	+	0	Parent=FBgn0039869.1.mrna1;Target=FBgn0039869.1 4 212 +
Chr2	stalkie_big_nohaplotig	CDS	83983210	83983336	.	+	1	Parent=FBgn0039869.1.mrna1;Target=FBgn0039869.1 213 339 +
Chr2	gffcl	locus	83984486	83985251	.	-	.	ID=RLOC_00019066;geneIDs=FBgn0000150.1.path1;transcripts=FBgn0000150.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83984486	83985251	.	-	.	ID=FBgn0000150.1.mrna1;geneID=FBgn0000150.1.path1;Name=FBgn0000150.1;Dir=sensecoverage=100.0;identity=99.8;matches=584;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019066
Chr2	stalkie_big_nohaplotig	exon	83984486	83984815	100	-	.	Parent=FBgn0000150.1.mrna1;Target=FBgn0000150.1 256 585 +
Chr2	stalkie_big_nohaplotig	exon	83984997	83985251	99	-	.	Parent=FBgn0000150.1.mrna1;Target=FBgn0000150.1 1 255 +
Chr2	stalkie_big_nohaplotig	CDS	83984486	83984815	.	-	0	Parent=FBgn0000150.1.mrna1;Target=FBgn0000150.1 256 585 +
Chr2	stalkie_big_nohaplotig	CDS	83984997	83985251	.	-	0	Parent=FBgn0000150.1.mrna1;Target=FBgn0000150.1 1 255 +
Chr2	gffcl	locus	83986266	83987202	.	-	.	ID=RLOC_00019067;geneIDs=FBgn0261479.1.path1;transcripts=FBgn0261479.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83986266	83987202	.	-	.	ID=FBgn0261479.1.mrna1;geneID=FBgn0261479.1.path1;Name=FBgn0261479.1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=927;mismatches=9;indels=1;unknowns=0;Target=FBgn0261479.1 936 1 .;CDS_Target=FBgn0261479.1 28 2 .;locus=RLOC_00019067
Chr2	stalkie_big_nohaplotig	exon	83986266	83987202	98	-	.	Parent=FBgn0261479.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83987174	83987201	.	-	0	Parent=FBgn0261479.1.mrna1
Chr2	gffcl	locus	83994219	83995122	.	+	.	ID=RLOC_00019069;geneIDs=comp150961_c0_seq1.path1;transcripts=comp150961_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83994219	83995122	.	+	.	ID=comp150961_c0_seq1.mrna1;geneID=comp150961_c0_seq1.path1;Name=comp150961_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=901;mismatches=3;indels=0;unknowns=0;Target=comp150961_c0_seq1 904 1 .;CDS_Target=comp150961_c0_seq1 238 140 .;locus=RLOC_00019069
Chr2	stalkie_big_nohaplotig	exon	83994219	83995122	99	+	.	Parent=comp150961_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	83994358	83994456	.	+	0	Parent=comp150961_c0_seq1.mrna1
Chr2	gffcl	locus	83998836	84003849	.	-	.	ID=RLOC_00019070;geneIDs=FBgn0017448.1.path1,comp155254_c0_seq1.path1;transcripts=FBgn0017448.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	83998836	84003687	.	-	.	ID=FBgn0017448.1.mrna1;geneID=FBgn0017448.1.path1;Name=FBgn0017448.1;Dir=sensecoverage=100.0;identity=99.9;matches=1699;mismatches=1;indels=0;unknowns=1;locus=RLOC_00019070
Chr2	stalkie_big_nohaplotig	exon	83998836	83998879	100	-	.	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 1658 1701 +
Chr2	stalkie_big_nohaplotig	exon	83998942	83999063	100	-	.	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 1536 1657 +
Chr2	stalkie_big_nohaplotig	exon	83999431	83999588	100	-	.	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 1378 1535 +
Chr2	stalkie_big_nohaplotig	exon	83999646	84000020	100	-	.	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 1003 1377 +
Chr2	stalkie_big_nohaplotig	exon	84000098	84000206	100	-	.	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 894 1002 +
Chr2	stalkie_big_nohaplotig	exon	84001301	84001441	99	-	.	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 753 893 +
Chr2	stalkie_big_nohaplotig	exon	84001505	84001656	100	-	.	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 601 752 +
Chr2	stalkie_big_nohaplotig	exon	84001728	84001795	100	-	.	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 533 600 +
Chr2	stalkie_big_nohaplotig	exon	84001860	84001977	100	-	.	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 415 532 +
Chr2	stalkie_big_nohaplotig	exon	84002061	84002167	100	-	.	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 308 414 +
Chr2	stalkie_big_nohaplotig	exon	84002320	84002372	100	-	.	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 255 307 +
Chr2	stalkie_big_nohaplotig	exon	84003434	84003687	100	-	.	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 1 254 +
Chr2	stalkie_big_nohaplotig	CDS	83998836	83998879	.	-	2	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 1658 1701 +
Chr2	stalkie_big_nohaplotig	CDS	83998942	83999063	.	-	1	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 1536 1657 +
Chr2	stalkie_big_nohaplotig	CDS	83999431	83999588	.	-	0	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 1378 1535 +
Chr2	stalkie_big_nohaplotig	CDS	83999646	84000020	.	-	0	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 1003 1377 +
Chr2	stalkie_big_nohaplotig	CDS	84000098	84000206	.	-	1	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 894 1002 +
Chr2	stalkie_big_nohaplotig	CDS	84001301	84001441	.	-	1	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 753 893 +
Chr2	stalkie_big_nohaplotig	CDS	84001505	84001656	.	-	0	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 601 752 +
Chr2	stalkie_big_nohaplotig	CDS	84001728	84001795	.	-	2	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 533 600 +
Chr2	stalkie_big_nohaplotig	CDS	84001860	84001977	.	-	0	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 415 532 +
Chr2	stalkie_big_nohaplotig	CDS	84002061	84002167	.	-	2	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 308 414 +
Chr2	stalkie_big_nohaplotig	CDS	84002320	84002372	.	-	1	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 255 307 +
Chr2	stalkie_big_nohaplotig	CDS	84003434	84003687	.	-	0	Parent=FBgn0017448.1.mrna1;Target=FBgn0017448.1 1 254 +
Chr2	gffcl	locus	84008803	84029311	.	-	.	ID=RLOC_00019071;geneIDs=FBgn0017448.2.path1,FBgn0017448.3.path1;transcripts=FBgn0017448.3.mrna1,FBgn0017448.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84008803	84024630	.	-	.	ID=FBgn0017448.3.mrna1;geneID=FBgn0017448.3.path1;Name=FBgn0017448.3;Dir=sensecoverage=100.0;identity=99.6;matches=1423;mismatches=5;indels=0;unknowns=0;locus=RLOC_00019071
Chr2	stalkie_big_nohaplotig	exon	84008803	84009068	99	-	.	Parent=FBgn0017448.3.mrna1;Target=FBgn0017448.3 1163 1428 +
Chr2	stalkie_big_nohaplotig	exon	84009150	84009277	100	-	.	Parent=FBgn0017448.3.mrna1;Target=FBgn0017448.3 1035 1162 +
Chr2	stalkie_big_nohaplotig	exon	84009340	84009497	98	-	.	Parent=FBgn0017448.3.mrna1;Target=FBgn0017448.3 877 1034 +
Chr2	stalkie_big_nohaplotig	exon	84009768	84010142	99	-	.	Parent=FBgn0017448.3.mrna1;Target=FBgn0017448.3 502 876 +
Chr2	stalkie_big_nohaplotig	exon	84010324	84010432	100	-	.	Parent=FBgn0017448.3.mrna1;Target=FBgn0017448.3 393 501 +
Chr2	stalkie_big_nohaplotig	exon	84011253	84011393	100	-	.	Parent=FBgn0017448.3.mrna1;Target=FBgn0017448.3 252 392 +
Chr2	stalkie_big_nohaplotig	exon	84011643	84011794	100	-	.	Parent=FBgn0017448.3.mrna1;Target=FBgn0017448.3 100 251 +
Chr2	stalkie_big_nohaplotig	exon	84012483	84012550	100	-	.	Parent=FBgn0017448.3.mrna1;Target=FBgn0017448.3 32 99 +
Chr2	stalkie_big_nohaplotig	exon	84024600	84024630	100	-	.	Parent=FBgn0017448.3.mrna1;Target=FBgn0017448.3 1 31 +
Chr2	stalkie_big_nohaplotig	CDS	84008803	84009068	.	-	2	Parent=FBgn0017448.3.mrna1;Target=FBgn0017448.3 1163 1428 +
Chr2	stalkie_big_nohaplotig	CDS	84009150	84009277	.	-	1	Parent=FBgn0017448.3.mrna1;Target=FBgn0017448.3 1035 1162 +
Chr2	stalkie_big_nohaplotig	CDS	84009340	84009497	.	-	0	Parent=FBgn0017448.3.mrna1;Target=FBgn0017448.3 877 1034 +
Chr2	stalkie_big_nohaplotig	CDS	84009768	84010142	.	-	0	Parent=FBgn0017448.3.mrna1;Target=FBgn0017448.3 502 876 +
Chr2	stalkie_big_nohaplotig	CDS	84010324	84010432	.	-	1	Parent=FBgn0017448.3.mrna1;Target=FBgn0017448.3 393 501 +
Chr2	stalkie_big_nohaplotig	CDS	84011253	84011393	.	-	1	Parent=FBgn0017448.3.mrna1;Target=FBgn0017448.3 252 392 +
Chr2	stalkie_big_nohaplotig	CDS	84011643	84011794	.	-	0	Parent=FBgn0017448.3.mrna1;Target=FBgn0017448.3 100 251 +
Chr2	stalkie_big_nohaplotig	CDS	84012483	84012550	.	-	2	Parent=FBgn0017448.3.mrna1;Target=FBgn0017448.3 32 99 +
Chr2	stalkie_big_nohaplotig	CDS	84024600	84024630	.	-	0	Parent=FBgn0017448.3.mrna1;Target=FBgn0017448.3 1 31 +
Chr2	stalkie_big_nohaplotig	mRNA	84017480	84029311	.	-	.	ID=FBgn0017448.2.mrna1;geneID=FBgn0017448.2.path1;Name=FBgn0017448.2;Dir=sensecoverage=100.0;identity=99.9;matches=1918;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019071
Chr2	stalkie_big_nohaplotig	exon	84017480	84017745	100	-	.	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 1655 1920 +
Chr2	stalkie_big_nohaplotig	exon	84017816	84017943	100	-	.	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 1527 1654 +
Chr2	stalkie_big_nohaplotig	exon	84018006	84018163	100	-	.	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 1369 1526 +
Chr2	stalkie_big_nohaplotig	exon	84019037	84019411	100	-	.	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 994 1368 +
Chr2	stalkie_big_nohaplotig	exon	84019545	84019653	100	-	.	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 885 993 +
Chr2	stalkie_big_nohaplotig	exon	84021878	84022018	100	-	.	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 744 884 +
Chr2	stalkie_big_nohaplotig	exon	84022277	84022428	100	-	.	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 592 743 +
Chr2	stalkie_big_nohaplotig	exon	84024169	84024236	100	-	.	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 524 591 +
Chr2	stalkie_big_nohaplotig	exon	84024600	84024717	99	-	.	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 406 523 +
Chr2	stalkie_big_nohaplotig	exon	84024782	84024888	100	-	.	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 299 405 +
Chr2	stalkie_big_nohaplotig	exon	84025662	84025714	100	-	.	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 246 298 +
Chr2	stalkie_big_nohaplotig	exon	84029067	84029311	99	-	.	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 1 245 +
Chr2	stalkie_big_nohaplotig	CDS	84017480	84017745	.	-	2	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 1655 1920 +
Chr2	stalkie_big_nohaplotig	CDS	84017816	84017943	.	-	1	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 1527 1654 +
Chr2	stalkie_big_nohaplotig	CDS	84018006	84018163	.	-	0	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 1369 1526 +
Chr2	stalkie_big_nohaplotig	CDS	84019037	84019411	.	-	0	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 994 1368 +
Chr2	stalkie_big_nohaplotig	CDS	84019545	84019653	.	-	1	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 885 993 +
Chr2	stalkie_big_nohaplotig	CDS	84021878	84022018	.	-	1	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 744 884 +
Chr2	stalkie_big_nohaplotig	CDS	84022277	84022428	.	-	0	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 592 743 +
Chr2	stalkie_big_nohaplotig	CDS	84024169	84024236	.	-	2	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 524 591 +
Chr2	stalkie_big_nohaplotig	CDS	84024600	84024717	.	-	0	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 406 523 +
Chr2	stalkie_big_nohaplotig	CDS	84024782	84024888	.	-	2	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 299 405 +
Chr2	stalkie_big_nohaplotig	CDS	84025662	84025714	.	-	1	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 246 298 +
Chr2	stalkie_big_nohaplotig	CDS	84029067	84029311	.	-	0	Parent=FBgn0017448.2.mrna1;Target=FBgn0017448.2 1 245 +
Chr2	gffcl	locus	84037727	84048794	.	-	.	ID=RLOC_00019072;geneIDs=FBgn0039873.1.path1;transcripts=FBgn0039873.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84037727	84048794	.	-	.	ID=FBgn0039873.1.mrna1;geneID=FBgn0039873.1.path1;Name=FBgn0039873.1;Dir=sensecoverage=100.0;identity=98.9;matches=1736;mismatches=19;indels=0;unknowns=0;locus=RLOC_00019072
Chr2	stalkie_big_nohaplotig	exon	84037727	84038003	98	-	.	Parent=FBgn0039873.1.mrna1;Target=FBgn0039873.1 1479 1755 +
Chr2	stalkie_big_nohaplotig	exon	84039981	84040108	99	-	.	Parent=FBgn0039873.1.mrna1;Target=FBgn0039873.1 1351 1478 +
Chr2	stalkie_big_nohaplotig	exon	84040202	84040685	99	-	.	Parent=FBgn0039873.1.mrna1;Target=FBgn0039873.1 867 1350 +
Chr2	stalkie_big_nohaplotig	exon	84041803	84041943	97	-	.	Parent=FBgn0039873.1.mrna1;Target=FBgn0039873.1 726 866 +
Chr2	stalkie_big_nohaplotig	exon	84042092	84042243	100	-	.	Parent=FBgn0039873.1.mrna1;Target=FBgn0039873.1 574 725 +
Chr2	stalkie_big_nohaplotig	exon	84042306	84042373	100	-	.	Parent=FBgn0039873.1.mrna1;Target=FBgn0039873.1 506 573 +
Chr2	stalkie_big_nohaplotig	exon	84048115	84048232	96	-	.	Parent=FBgn0039873.1.mrna1;Target=FBgn0039873.1 388 505 +
Chr2	stalkie_big_nohaplotig	exon	84048295	84048454	99	-	.	Parent=FBgn0039873.1.mrna1;Target=FBgn0039873.1 228 387 +
Chr2	stalkie_big_nohaplotig	exon	84048568	84048794	98	-	.	Parent=FBgn0039873.1.mrna1;Target=FBgn0039873.1 1 227 +
Chr2	stalkie_big_nohaplotig	CDS	84037727	84038003	.	-	1	Parent=FBgn0039873.1.mrna1;Target=FBgn0039873.1 1479 1755 +
Chr2	stalkie_big_nohaplotig	CDS	84039981	84040108	.	-	0	Parent=FBgn0039873.1.mrna1;Target=FBgn0039873.1 1351 1478 +
Chr2	stalkie_big_nohaplotig	CDS	84040202	84040685	.	-	1	Parent=FBgn0039873.1.mrna1;Target=FBgn0039873.1 867 1350 +
Chr2	stalkie_big_nohaplotig	CDS	84041803	84041943	.	-	1	Parent=FBgn0039873.1.mrna1;Target=FBgn0039873.1 726 866 +
Chr2	stalkie_big_nohaplotig	CDS	84042092	84042243	.	-	0	Parent=FBgn0039873.1.mrna1;Target=FBgn0039873.1 574 725 +
Chr2	stalkie_big_nohaplotig	CDS	84042306	84042373	.	-	2	Parent=FBgn0039873.1.mrna1;Target=FBgn0039873.1 506 573 +
Chr2	stalkie_big_nohaplotig	CDS	84048115	84048232	.	-	0	Parent=FBgn0039873.1.mrna1;Target=FBgn0039873.1 388 505 +
Chr2	stalkie_big_nohaplotig	CDS	84048295	84048454	.	-	1	Parent=FBgn0039873.1.mrna1;Target=FBgn0039873.1 228 387 +
Chr2	stalkie_big_nohaplotig	CDS	84048568	84048794	.	-	0	Parent=FBgn0039873.1.mrna1;Target=FBgn0039873.1 1 227 +
Chr2	gffcl	locus	84062114	84113857	.	+	.	ID=RLOC_00019073;geneIDs=comp159693_c1_seq1.path1;transcripts=comp159693_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84062114	84113857	.	+	.	ID=comp159693_c1_seq1.mrna1;geneID=comp159693_c1_seq1.path1;Name=comp159693_c1_seq1;Dir=sensecoverage=69.4;identity=91.8;matches=917;mismatches=37;indels=45;unknowns=0;locus=RLOC_00019073
Chr2	stalkie_big_nohaplotig	exon	84062114	84062207	100	+	.	Parent=comp159693_c1_seq1.mrna1;Target=comp159693_c1_seq1 1 94 +
Chr2	stalkie_big_nohaplotig	exon	84062308	84063063	94	+	.	Parent=comp159693_c1_seq1.mrna1;Target=comp159693_c1_seq1 95 872 +
Chr2	stalkie_big_nohaplotig	exon	84067164	84067171	100	+	.	Parent=comp159693_c1_seq1.mrna1;Target=comp159693_c1_seq1 884 891 +
Chr2	stalkie_big_nohaplotig	exon	84068565	84068579	38	+	.	Parent=comp159693_c1_seq1.mrna1;Target=comp159693_c1_seq1 897 922 +
Chr2	stalkie_big_nohaplotig	exon	84079916	84079920	100	+	.	Parent=comp159693_c1_seq1.mrna1;Target=comp159693_c1_seq1 923 927 +
Chr2	stalkie_big_nohaplotig	exon	84086650	84086710	60	+	.	Parent=comp159693_c1_seq1.mrna1;Target=comp159693_c1_seq1 928 976 +
Chr2	stalkie_big_nohaplotig	exon	84086773	84086778	100	+	.	Parent=comp159693_c1_seq1.mrna1;Target=comp159693_c1_seq1 977 982 +
Chr2	stalkie_big_nohaplotig	exon	84093689	84093697	100	+	.	Parent=comp159693_c1_seq1.mrna1;Target=comp159693_c1_seq1 984 992 +
Chr2	stalkie_big_nohaplotig	exon	84110475	84110481	100	+	.	Parent=comp159693_c1_seq1.mrna1;Target=comp159693_c1_seq1 1007 1013 +
Chr2	stalkie_big_nohaplotig	exon	84113856	84113857	100	+	.	Parent=comp159693_c1_seq1.mrna1;Target=comp159693_c1_seq1 1014 1015 +
Chr2	stalkie_big_nohaplotig	CDS	84062115	84062207	.	+	0	Parent=comp159693_c1_seq1.mrna1;Target=comp159693_c1_seq1 2 94 +
Chr2	stalkie_big_nohaplotig	CDS	84062308	84062823	.	+	0	Parent=comp159693_c1_seq1.mrna1;Target=comp159693_c1_seq1 95 610 +
Chr2	gffcl	locus	84150840	84153465	.	+	.	ID=RLOC_00019074;geneIDs=FBgn0043900.1.path1;transcripts=FBgn0043900.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84150840	84153465	.	+	.	ID=FBgn0043900.1.mrna1;geneID=FBgn0043900.1.path1;Name=FBgn0043900.1;Dir=sensecoverage=100.0;identity=99.8;matches=2557;mismatches=4;indels=1;unknowns=0;locus=RLOC_00019074
Chr2	stalkie_big_nohaplotig	exon	84150840	84153282	99	+	.	Parent=FBgn0043900.1.mrna1;Target=FBgn0043900.1 1 2444 +
Chr2	stalkie_big_nohaplotig	exon	84153348	84153465	100	+	.	Parent=FBgn0043900.1.mrna1;Target=FBgn0043900.1 2445 2562 +
Chr2	stalkie_big_nohaplotig	CDS	84150926	84153282	.	+	0	Parent=FBgn0043900.1.mrna1;Target=FBgn0043900.1 88 2444 +
Chr2	stalkie_big_nohaplotig	CDS	84153348	84153465	.	+	1	Parent=FBgn0043900.1.mrna1;Target=FBgn0043900.1 2445 2562 +
Chr2	gffcl	locus	84157064	84157639	.	-	.	ID=RLOC_00019075;geneIDs=FBgn0039501.1.path1;transcripts=FBgn0039501.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84157064	84157639	.	-	.	ID=FBgn0039501.1.mrna1;geneID=FBgn0039501.1.path1;Name=FBgn0039501.1;Dir=sensecoverage=21.7;identity=100.0;matches=475;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019075
Chr2	stalkie_big_nohaplotig	exon	84157064	84157186	100	-	.	Parent=FBgn0039501.1.mrna1;Target=FBgn0039501.1 2068 2190 +
Chr2	stalkie_big_nohaplotig	exon	84157288	84157639	100	-	.	Parent=FBgn0039501.1.mrna1;Target=FBgn0039501.1 1716 2067 +
Chr2	stalkie_big_nohaplotig	CDS	84157064	84157186	.	-	0	Parent=FBgn0039501.1.mrna1;Target=FBgn0039501.1 2068 2190 +
Chr2	stalkie_big_nohaplotig	CDS	84157288	84157638	.	-	0	Parent=FBgn0039501.1.mrna1;Target=FBgn0039501.1 1717 2067 +
Chr2	gffcl	locus	84158896	84161941	.	-	.	ID=RLOC_00019076;geneIDs=FBgn0010441.1.path1;transcripts=FBgn0010441.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84158896	84161941	.	-	.	ID=FBgn0010441.1.mrna1;geneID=FBgn0010441.1.path1;Name=FBgn0010441.1;Dir=sensecoverage=100.0;identity=99.7;matches=1564;mismatches=5;indels=0;unknowns=0;locus=RLOC_00019076
Chr2	stalkie_big_nohaplotig	exon	84158896	84159424	99	-	.	Parent=FBgn0010441.1.mrna1;Target=FBgn0010441.1 1041 1569 +
Chr2	stalkie_big_nohaplotig	exon	84159481	84160176	99	-	.	Parent=FBgn0010441.1.mrna1;Target=FBgn0010441.1 345 1040 +
Chr2	stalkie_big_nohaplotig	exon	84161531	84161640	100	-	.	Parent=FBgn0010441.1.mrna1;Target=FBgn0010441.1 235 344 +
Chr2	stalkie_big_nohaplotig	exon	84161708	84161941	100	-	.	Parent=FBgn0010441.1.mrna1;Target=FBgn0010441.1 1 234 +
Chr2	stalkie_big_nohaplotig	CDS	84158896	84159424	.	-	1	Parent=FBgn0010441.1.mrna1;Target=FBgn0010441.1 1041 1569 +
Chr2	stalkie_big_nohaplotig	CDS	84159481	84160176	.	-	1	Parent=FBgn0010441.1.mrna1;Target=FBgn0010441.1 345 1040 +
Chr2	stalkie_big_nohaplotig	CDS	84161531	84161640	.	-	0	Parent=FBgn0010441.1.mrna1;Target=FBgn0010441.1 235 344 +
Chr2	stalkie_big_nohaplotig	CDS	84161708	84161941	.	-	0	Parent=FBgn0010441.1.mrna1;Target=FBgn0010441.1 1 234 +
Chr2	gffcl	locus	84163197	84166424	.	+	.	ID=RLOC_00019077;geneIDs=FBgn0014930.1.path1;transcripts=FBgn0014930.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84163197	84166424	.	+	.	ID=FBgn0014930.1.mrna1;geneID=FBgn0014930.1.path1;Name=FBgn0014930.1;Dir=sensecoverage=100.0;identity=99.8;matches=551;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019077
Chr2	stalkie_big_nohaplotig	exon	84163197	84163326	99	+	.	Parent=FBgn0014930.1.mrna1;Target=FBgn0014930.1 1 130 +
Chr2	stalkie_big_nohaplotig	exon	84163394	84163545	100	+	.	Parent=FBgn0014930.1.mrna1;Target=FBgn0014930.1 131 282 +
Chr2	stalkie_big_nohaplotig	exon	84166155	84166424	100	+	.	Parent=FBgn0014930.1.mrna1;Target=FBgn0014930.1 283 552 +
Chr2	stalkie_big_nohaplotig	CDS	84163197	84163326	.	+	0	Parent=FBgn0014930.1.mrna1;Target=FBgn0014930.1 1 130 +
Chr2	stalkie_big_nohaplotig	CDS	84163394	84163545	.	+	2	Parent=FBgn0014930.1.mrna1;Target=FBgn0014930.1 131 282 +
Chr2	stalkie_big_nohaplotig	CDS	84166155	84166424	.	+	0	Parent=FBgn0014930.1.mrna1;Target=FBgn0014930.1 283 552 +
Chr2	gffcl	locus	84169293	84170129	.	-	.	ID=RLOC_00019078;geneIDs=comp153781_c0_seq1.path1;transcripts=comp153781_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84169293	84170129	.	-	.	ID=comp153781_c0_seq1.mrna1;geneID=comp153781_c0_seq1.path1;Name=comp153781_c0_seq1;Dir=indeterminatecoverage=83.2;identity=95.7;matches=805;mismatches=28;indels=8;unknowns=0;Target=comp153781_c0_seq1 997 161 .;CDS_Target=comp153781_c0_seq1 560 429 .;locus=RLOC_00019078
Chr2	stalkie_big_nohaplotig	exon	84169293	84170129	95	-	.	Parent=comp153781_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84169727	84169858	.	-	0	Parent=comp153781_c0_seq1.mrna1
Chr2	gffcl	locus	84173057	84174027	.	-	.	ID=RLOC_00019080;geneIDs=FBgn0024909.1.path1;transcripts=FBgn0024909.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84173057	84174027	.	-	.	ID=FBgn0024909.1.mrna1;geneID=FBgn0024909.1.path1;Name=FBgn0024909.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=967;mismatches=2;indels=1;unknowns=2;Target=FBgn0024909.1 972 1 .;CDS_Target=FBgn0024909.1 56 3 .;locus=RLOC_00019080
Chr2	stalkie_big_nohaplotig	exon	84173057	84174027	99	-	.	Parent=FBgn0024909.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84173973	84174025	.	-	0	Parent=FBgn0024909.1.mrna1
Chr2	gffcl	locus	84178529	84183402	.	+	.	ID=RLOC_00019081;geneIDs=FBgn0037530.1.path1;transcripts=FBgn0037530.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84178529	84183402	.	+	.	ID=FBgn0037530.1.mrna1;geneID=FBgn0037530.1.path1;Name=FBgn0037530.1;Dir=sensecoverage=100.0;identity=99.6;matches=2745;mismatches=12;indels=0;unknowns=0;locus=RLOC_00019081
Chr2	stalkie_big_nohaplotig	exon	84178529	84178635	99	+	.	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 1 107 +
Chr2	stalkie_big_nohaplotig	exon	84178697	84179339	99	+	.	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 108 750 +
Chr2	stalkie_big_nohaplotig	exon	84179408	84179554	100	+	.	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 751 897 +
Chr2	stalkie_big_nohaplotig	exon	84179622	84179934	99	+	.	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 898 1210 +
Chr2	stalkie_big_nohaplotig	exon	84180032	84180052	100	+	.	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 1211 1231 +
Chr2	stalkie_big_nohaplotig	exon	84180257	84180591	98	+	.	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 1232 1566 +
Chr2	stalkie_big_nohaplotig	exon	84180660	84180854	100	+	.	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 1567 1761 +
Chr2	stalkie_big_nohaplotig	exon	84181055	84181132	100	+	.	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 1762 1839 +
Chr2	stalkie_big_nohaplotig	exon	84181955	84182156	99	+	.	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 1840 2041 +
Chr2	stalkie_big_nohaplotig	exon	84182230	84182382	99	+	.	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 2042 2194 +
Chr2	stalkie_big_nohaplotig	exon	84182706	84182876	100	+	.	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 2195 2365 +
Chr2	stalkie_big_nohaplotig	exon	84182946	84183179	100	+	.	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 2366 2599 +
Chr2	stalkie_big_nohaplotig	exon	84183245	84183402	100	+	.	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 2600 2757 +
Chr2	stalkie_big_nohaplotig	CDS	84178529	84178635	.	+	0	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 1 107 +
Chr2	stalkie_big_nohaplotig	CDS	84178697	84179339	.	+	1	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 108 750 +
Chr2	stalkie_big_nohaplotig	CDS	84179408	84179554	.	+	0	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 751 897 +
Chr2	stalkie_big_nohaplotig	CDS	84179622	84179934	.	+	0	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 898 1210 +
Chr2	stalkie_big_nohaplotig	CDS	84180032	84180052	.	+	2	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 1211 1231 +
Chr2	stalkie_big_nohaplotig	CDS	84180257	84180591	.	+	2	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 1232 1566 +
Chr2	stalkie_big_nohaplotig	CDS	84180660	84180854	.	+	0	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 1567 1761 +
Chr2	stalkie_big_nohaplotig	CDS	84181055	84181132	.	+	0	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 1762 1839 +
Chr2	stalkie_big_nohaplotig	CDS	84181955	84182156	.	+	0	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 1840 2041 +
Chr2	stalkie_big_nohaplotig	CDS	84182230	84182382	.	+	2	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 2042 2194 +
Chr2	stalkie_big_nohaplotig	CDS	84182706	84182876	.	+	2	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 2195 2365 +
Chr2	stalkie_big_nohaplotig	CDS	84182946	84183179	.	+	2	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 2366 2599 +
Chr2	stalkie_big_nohaplotig	CDS	84183245	84183402	.	+	2	Parent=FBgn0037530.1.mrna1;Target=FBgn0037530.1 2600 2757 +
Chr2	gffcl	locus	84186244	84247760	.	+	.	ID=RLOC_00019082;geneIDs=FBgn0037529.1.path1;transcripts=FBgn0037529.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84186244	84247760	.	+	.	ID=FBgn0037529.1.mrna1;geneID=FBgn0037529.1.path1;Name=FBgn0037529.1;Dir=sensecoverage=100.0;identity=99.9;matches=1187;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019082
Chr2	stalkie_big_nohaplotig	exon	84186244	84186348	100	+	.	Parent=FBgn0037529.1.mrna1;Target=FBgn0037529.1 1 105 +
Chr2	stalkie_big_nohaplotig	exon	84186530	84186739	99	+	.	Parent=FBgn0037529.1.mrna1;Target=FBgn0037529.1 106 315 +
Chr2	stalkie_big_nohaplotig	exon	84186814	84186987	100	+	.	Parent=FBgn0037529.1.mrna1;Target=FBgn0037529.1 316 489 +
Chr2	stalkie_big_nohaplotig	exon	84187056	84187141	100	+	.	Parent=FBgn0037529.1.mrna1;Target=FBgn0037529.1 490 575 +
Chr2	stalkie_big_nohaplotig	exon	84187938	84188182	100	+	.	Parent=FBgn0037529.1.mrna1;Target=FBgn0037529.1 576 820 +
Chr2	stalkie_big_nohaplotig	exon	84188380	84188495	100	+	.	Parent=FBgn0037529.1.mrna1;Target=FBgn0037529.1 821 936 +
Chr2	stalkie_big_nohaplotig	exon	84247443	84247605	100	+	.	Parent=FBgn0037529.1.mrna1;Target=FBgn0037529.1 937 1099 +
Chr2	stalkie_big_nohaplotig	exon	84247672	84247760	100	+	.	Parent=FBgn0037529.1.mrna1;Target=FBgn0037529.1 1100 1188 +
Chr2	stalkie_big_nohaplotig	CDS	84186244	84186348	.	+	0	Parent=FBgn0037529.1.mrna1;Target=FBgn0037529.1 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	84186530	84186739	.	+	0	Parent=FBgn0037529.1.mrna1;Target=FBgn0037529.1 106 315 +
Chr2	stalkie_big_nohaplotig	CDS	84186814	84186987	.	+	0	Parent=FBgn0037529.1.mrna1;Target=FBgn0037529.1 316 489 +
Chr2	stalkie_big_nohaplotig	CDS	84187056	84187141	.	+	0	Parent=FBgn0037529.1.mrna1;Target=FBgn0037529.1 490 575 +
Chr2	stalkie_big_nohaplotig	CDS	84187938	84188182	.	+	1	Parent=FBgn0037529.1.mrna1;Target=FBgn0037529.1 576 820 +
Chr2	stalkie_big_nohaplotig	CDS	84188380	84188495	.	+	2	Parent=FBgn0037529.1.mrna1;Target=FBgn0037529.1 821 936 +
Chr2	stalkie_big_nohaplotig	CDS	84247443	84247605	.	+	0	Parent=FBgn0037529.1.mrna1;Target=FBgn0037529.1 937 1099 +
Chr2	stalkie_big_nohaplotig	CDS	84247672	84247760	.	+	2	Parent=FBgn0037529.1.mrna1;Target=FBgn0037529.1 1100 1188 +
Chr2	gffcl	locus	84190911	84197806	.	-	.	ID=RLOC_00019083;geneIDs=comp132858_c0_seq1.path1;transcripts=comp132858_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84190911	84197806	.	-	.	ID=comp132858_c0_seq1.mrna1;geneID=comp132858_c0_seq1.path1;Name=comp132858_c0_seq1;Dir=indeterminatecoverage=58.9;identity=96.7;matches=582;mismatches=12;indels=8;unknowns=0;Target=comp132858_c0_seq1 680 636 .;locus=RLOC_00019083
Chr2	stalkie_big_nohaplotig	exon	84190911	84191457	98	-	.	Parent=comp132858_c0_seq1.mrna1;Target=comp132858_c0_seq1 1003 458 .
Chr2	stalkie_big_nohaplotig	exon	84195789	84195816	62	-	.	Parent=comp132858_c0_seq1.mrna1;Target=comp132858_c0_seq1 457 423 .
Chr2	stalkie_big_nohaplotig	exon	84196626	84196632	100	-	.	Parent=comp132858_c0_seq1.mrna1;Target=comp132858_c0_seq1 422 416 .
Chr2	stalkie_big_nohaplotig	exon	84197794	84197806	100	-	.	Parent=comp132858_c0_seq1.mrna1;Target=comp132858_c0_seq1 415 403 .
Chr2	stalkie_big_nohaplotig	CDS	84191234	84191278	.	-	0	Parent=comp132858_c0_seq1.mrna1
Chr2	gffcl	locus	84192889	84201859	.	-	.	ID=RLOC_00019084;geneIDs=FBgn0260005.1.path1;transcripts=FBgn0260005.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84192889	84201859	.	-	.	ID=FBgn0260005.1.mrna1;geneID=FBgn0260005.1.path1;Name=FBgn0260005.1;Dir=sensecoverage=100.0;identity=99.5;matches=2935;mismatches=14;indels=0;unknowns=0;locus=RLOC_00019084
Chr2	stalkie_big_nohaplotig	exon	84192889	84195715	99	-	.	Parent=FBgn0260005.1.mrna1;Target=FBgn0260005.1 123 2949 +
Chr2	stalkie_big_nohaplotig	exon	84201738	84201859	99	-	.	Parent=FBgn0260005.1.mrna1;Target=FBgn0260005.1 1 122 +
Chr2	stalkie_big_nohaplotig	CDS	84192889	84195715	.	-	1	Parent=FBgn0260005.1.mrna1;Target=FBgn0260005.1 123 2949 +
Chr2	stalkie_big_nohaplotig	CDS	84201738	84201859	.	-	0	Parent=FBgn0260005.1.mrna1;Target=FBgn0260005.1 1 122 +
Chr2	gffcl	locus	84247851	84249663	.	-	.	ID=RLOC_00019085;geneIDs=FBgn0037526.1.path1;transcripts=FBgn0037526.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84247851	84249663	.	-	.	ID=FBgn0037526.1.mrna1;geneID=FBgn0037526.1.path1;Name=FBgn0037526.1;Dir=sensecoverage=100.0;identity=100.0;matches=1689;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019085
Chr2	stalkie_big_nohaplotig	exon	84247851	84248001	100	-	.	Parent=FBgn0037526.1.mrna1;Target=FBgn0037526.1 1539 1689 +
Chr2	stalkie_big_nohaplotig	exon	84248068	84248434	100	-	.	Parent=FBgn0037526.1.mrna1;Target=FBgn0037526.1 1172 1538 +
Chr2	stalkie_big_nohaplotig	exon	84248493	84249663	100	-	.	Parent=FBgn0037526.1.mrna1;Target=FBgn0037526.1 1 1171 +
Chr2	stalkie_big_nohaplotig	CDS	84247851	84248001	.	-	1	Parent=FBgn0037526.1.mrna1;Target=FBgn0037526.1 1539 1689 +
Chr2	stalkie_big_nohaplotig	CDS	84248068	84248434	.	-	2	Parent=FBgn0037526.1.mrna1;Target=FBgn0037526.1 1172 1538 +
Chr2	stalkie_big_nohaplotig	CDS	84248493	84249663	.	-	0	Parent=FBgn0037526.1.mrna1;Target=FBgn0037526.1 1 1171 +
Chr2	gffcl	locus	84250706	84251355	.	-	.	ID=RLOC_00019086;geneIDs=comp129803_c0_seq1.path1;transcripts=comp129803_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84250706	84251355	.	-	.	ID=comp129803_c0_seq1.mrna1;geneID=comp129803_c0_seq1.path1;Name=comp129803_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=646;mismatches=4;indels=1;unknowns=0;Target=comp129803_c0_seq1 651 1 .;CDS_Target=comp129803_c0_seq1 378 262 .;locus=RLOC_00019086
Chr2	stalkie_big_nohaplotig	exon	84250706	84251355	99	-	.	Parent=comp129803_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84250979	84251095	.	-	0	Parent=comp129803_c0_seq1.mrna1
Chr2	gffcl	locus	84251551	84252586	.	-	.	ID=RLOC_00019087;geneIDs=FBgn0037460.1.path1;transcripts=FBgn0037460.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84251551	84252586	.	-	.	ID=FBgn0037460.1.mrna1;geneID=FBgn0037460.1.path1;Name=FBgn0037460.1;Dir=sensecoverage=100.0;identity=100.0;matches=759;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019087
Chr2	stalkie_big_nohaplotig	exon	84251551	84251832	100	-	.	Parent=FBgn0037460.1.mrna1;Target=FBgn0037460.1 478 759 +
Chr2	stalkie_big_nohaplotig	exon	84252023	84252130	100	-	.	Parent=FBgn0037460.1.mrna1;Target=FBgn0037460.1 370 477 +
Chr2	stalkie_big_nohaplotig	exon	84252218	84252586	100	-	.	Parent=FBgn0037460.1.mrna1;Target=FBgn0037460.1 1 369 +
Chr2	stalkie_big_nohaplotig	CDS	84251551	84251832	.	-	0	Parent=FBgn0037460.1.mrna1;Target=FBgn0037460.1 478 759 +
Chr2	stalkie_big_nohaplotig	CDS	84252023	84252130	.	-	0	Parent=FBgn0037460.1.mrna1;Target=FBgn0037460.1 370 477 +
Chr2	stalkie_big_nohaplotig	CDS	84252218	84252586	.	-	0	Parent=FBgn0037460.1.mrna1;Target=FBgn0037460.1 1 369 +
Chr2	gffcl	locus	84253941	84254767	.	-	.	ID=RLOC_00019088;geneIDs=FBgn0037460.2.path1;transcripts=FBgn0037460.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84253941	84254767	.	-	.	ID=FBgn0037460.2.mrna1;geneID=FBgn0037460.2.path1;Name=FBgn0037460.2;Dir=sensecoverage=100.0;identity=99.4;matches=689;mismatches=4;indels=0;unknowns=0;locus=RLOC_00019088
Chr2	stalkie_big_nohaplotig	exon	84253941	84254156	99	-	.	Parent=FBgn0037460.2.mrna1;Target=FBgn0037460.2 478 693 +
Chr2	stalkie_big_nohaplotig	exon	84254222	84254329	100	-	.	Parent=FBgn0037460.2.mrna1;Target=FBgn0037460.2 370 477 +
Chr2	stalkie_big_nohaplotig	exon	84254399	84254767	99	-	.	Parent=FBgn0037460.2.mrna1;Target=FBgn0037460.2 1 369 +
Chr2	stalkie_big_nohaplotig	CDS	84253941	84254156	.	-	0	Parent=FBgn0037460.2.mrna1;Target=FBgn0037460.2 478 693 +
Chr2	stalkie_big_nohaplotig	CDS	84254222	84254329	.	-	0	Parent=FBgn0037460.2.mrna1;Target=FBgn0037460.2 370 477 +
Chr2	stalkie_big_nohaplotig	CDS	84254399	84254767	.	-	0	Parent=FBgn0037460.2.mrna1;Target=FBgn0037460.2 1 369 +
Chr2	gffcl	locus	84256438	84256807	.	-	.	ID=RLOC_00019089;geneIDs=comp152985_c0_seq1.path1;transcripts=comp152985_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84256438	84256807	.	-	.	ID=comp152985_c0_seq1.mrna1;geneID=comp152985_c0_seq1.path1;Name=comp152985_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=370;mismatches=0;indels=0;unknowns=0;Target=comp152985_c0_seq1 370 1 .;CDS_Target=comp152985_c0_seq1 137 3 .;locus=RLOC_00019089
Chr2	stalkie_big_nohaplotig	exon	84256438	84256807	100	-	.	Parent=comp152985_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84256671	84256805	.	-	0	Parent=comp152985_c0_seq1.mrna1
Chr2	gffcl	locus	84260080	84295344	.	.	.	ID=RLOC_00019090;geneIDs=FBgn0086372.1.path1,comp143313_c1_seq1.path1,comp159918_c0_seq1.path1;transcripts=FBgn0086372.1.mrna1,comp143313_c1_seq1.mrna1,comp159918_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84260080	84295344	.	+	.	ID=FBgn0086372.1.mrna1;geneID=FBgn0086372.1.path1;Name=FBgn0086372.1;Dir=sensecoverage=100.0;identity=99.8;matches=2369;mismatches=4;indels=0;unknowns=0;locus=RLOC_00019090
Chr2	stalkie_big_nohaplotig	exon	84260080	84260251	99	+	.	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 1 172 +
Chr2	stalkie_big_nohaplotig	exon	84271287	84271429	100	+	.	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 173 315 +
Chr2	stalkie_big_nohaplotig	exon	84274655	84274730	100	+	.	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 316 391 +
Chr2	stalkie_big_nohaplotig	exon	84275494	84275526	100	+	.	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 392 424 +
Chr2	stalkie_big_nohaplotig	exon	84275765	84275867	100	+	.	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 425 527 +
Chr2	stalkie_big_nohaplotig	exon	84278298	84278419	100	+	.	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 528 649 +
Chr2	stalkie_big_nohaplotig	exon	84278574	84278767	100	+	.	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 650 843 +
Chr2	stalkie_big_nohaplotig	exon	84278828	84278964	100	+	.	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 844 980 +
Chr2	stalkie_big_nohaplotig	exon	84279811	84279837	100	+	.	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 981 1007 +
Chr2	stalkie_big_nohaplotig	exon	84280468	84280633	100	+	.	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 1008 1173 +
Chr2	stalkie_big_nohaplotig	exon	84280707	84280953	100	+	.	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 1174 1420 +
Chr2	stalkie_big_nohaplotig	exon	84282488	84282580	100	+	.	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 1421 1513 +
Chr2	stalkie_big_nohaplotig	exon	84284776	84285024	99	+	.	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 1514 1762 +
Chr2	stalkie_big_nohaplotig	exon	84288762	84288981	99	+	.	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 1763 1982 +
Chr2	stalkie_big_nohaplotig	exon	84290157	84290256	100	+	.	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 1983 2082 +
Chr2	stalkie_big_nohaplotig	exon	84292124	84292213	100	+	.	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 2083 2172 +
Chr2	stalkie_big_nohaplotig	exon	84295144	84295344	100	+	.	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 2173 2373 +
Chr2	stalkie_big_nohaplotig	CDS	84260080	84260251	.	+	0	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 1 172 +
Chr2	stalkie_big_nohaplotig	CDS	84271287	84271429	.	+	2	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 173 315 +
Chr2	stalkie_big_nohaplotig	CDS	84274655	84274730	.	+	0	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 316 391 +
Chr2	stalkie_big_nohaplotig	CDS	84275494	84275526	.	+	2	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 392 424 +
Chr2	stalkie_big_nohaplotig	CDS	84275765	84275867	.	+	2	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 425 527 +
Chr2	stalkie_big_nohaplotig	CDS	84278298	84278419	.	+	1	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 528 649 +
Chr2	stalkie_big_nohaplotig	CDS	84278574	84278767	.	+	2	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 650 843 +
Chr2	stalkie_big_nohaplotig	CDS	84278828	84278964	.	+	0	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 844 980 +
Chr2	stalkie_big_nohaplotig	CDS	84279811	84279837	.	+	1	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 981 1007 +
Chr2	stalkie_big_nohaplotig	CDS	84280468	84280633	.	+	1	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 1008 1173 +
Chr2	stalkie_big_nohaplotig	CDS	84280707	84280953	.	+	0	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 1174 1420 +
Chr2	stalkie_big_nohaplotig	CDS	84282488	84282580	.	+	2	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 1421 1513 +
Chr2	stalkie_big_nohaplotig	CDS	84284776	84285024	.	+	2	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 1514 1762 +
Chr2	stalkie_big_nohaplotig	CDS	84288762	84288981	.	+	2	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 1763 1982 +
Chr2	stalkie_big_nohaplotig	CDS	84290157	84290256	.	+	1	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 1983 2082 +
Chr2	stalkie_big_nohaplotig	CDS	84292124	84292213	.	+	0	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 2083 2172 +
Chr2	stalkie_big_nohaplotig	CDS	84295144	84295344	.	+	0	Parent=FBgn0086372.1.mrna1;Target=FBgn0086372.1 2173 2373 +
Chr2	stalkie_big_nohaplotig	mRNA	84290234	84290501	.	-	.	ID=comp143313_c1_seq1.mrna1;geneID=comp143313_c1_seq1.path1;Name=comp143313_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=265;mismatches=2;indels=1;unknowns=0;Target=comp143313_c1_seq1 267 1 .;CDS_Target=comp143313_c1_seq1 25 2 .;locus=RLOC_00019090
Chr2	stalkie_big_nohaplotig	exon	84290234	84290501	98	-	.	Parent=comp143313_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84290477	84290500	.	-	0	Parent=comp143313_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84292190	84293630	.	-	.	ID=comp159918_c0_seq1.mrna1;geneID=comp159918_c0_seq1.path1;Name=comp159918_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.1;matches=1371;mismatches=34;indels=52;unknowns=0;Target=comp159918_c0_seq1 1421 1 .;CDS_Target=comp159918_c0_seq1 238 86 .;locus=RLOC_00019090
Chr2	stalkie_big_nohaplotig	exon	84292190	84293630	94	-	.	Parent=comp159918_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84293368	84293544	.	-	0	Parent=comp159918_c0_seq1.mrna1
Chr2	gffcl	locus	84286103	84287679	.	-	.	ID=RLOC_00019091;geneIDs=comp157285_c1_seq1.path1;transcripts=comp157285_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84286103	84287679	.	-	.	ID=comp157285_c1_seq1.mrna1;geneID=comp157285_c1_seq1.path1;Name=comp157285_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1569;mismatches=7;indels=1;unknowns=0;Target=comp157285_c1_seq1 1576 1 .;CDS_Target=comp157285_c1_seq1 780 619 .;locus=RLOC_00019091
Chr2	stalkie_big_nohaplotig	exon	84286103	84287679	99	-	.	Parent=comp157285_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84286900	84287061	.	-	0	Parent=comp157285_c1_seq1.mrna1
Chr2	gffcl	locus	84293874	84294928	.	-	.	ID=RLOC_00019092;geneIDs=comp158706_c0_seq1.path1;transcripts=comp158706_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84293874	84294928	.	-	.	ID=comp158706_c0_seq1.mrna1;geneID=comp158706_c0_seq1.path1;Name=comp158706_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=1037;mismatches=18;indels=3;unknowns=0;Target=comp158706_c0_seq1 1058 1 .;CDS_Target=comp158706_c0_seq1 87 1 .;locus=RLOC_00019092
Chr2	stalkie_big_nohaplotig	exon	84293874	84294928	98	-	.	Parent=comp158706_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84294842	84294928	.	-	0	Parent=comp158706_c0_seq1.mrna1
Chr2	gffcl	locus	84295571	84297008	.	+	.	ID=RLOC_00019093;geneIDs=comp157948_c0_seq1.path1;transcripts=comp157948_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84295571	84297008	.	+	.	ID=comp157948_c0_seq1.mrna1;geneID=comp157948_c0_seq1.path1;Name=comp157948_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1429;mismatches=9;indels=0;unknowns=0;Target=comp157948_c0_seq1 1438 1 .;CDS_Target=comp157948_c0_seq1 819 652 .;locus=RLOC_00019093
Chr2	stalkie_big_nohaplotig	exon	84295571	84297008	99	+	.	Parent=comp157948_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84296222	84296389	.	+	0	Parent=comp157948_c0_seq1.mrna1
Chr2	gffcl	locus	84297108	84298151	.	+	.	ID=RLOC_00019094;geneIDs=comp155475_c0_seq1.path1;transcripts=comp155475_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84297108	84298151	.	+	.	ID=comp155475_c0_seq1.mrna1;geneID=comp155475_c0_seq1.path1;Name=comp155475_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1039;mismatches=5;indels=2;unknowns=0;Target=comp155475_c0_seq1 1046 1 .;CDS_Target=comp155475_c0_seq1 263 123 .;locus=RLOC_00019094
Chr2	stalkie_big_nohaplotig	exon	84297108	84298151	99	+	.	Parent=comp155475_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84297230	84297370	.	+	0	Parent=comp155475_c0_seq1.mrna1
Chr2	gffcl	locus	84298163	84298399	.	-	.	ID=RLOC_00019095;geneIDs=comp71982_c0_seq1.path1;transcripts=comp71982_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84298163	84298399	.	-	.	ID=comp71982_c0_seq1.mrna1;geneID=comp71982_c0_seq1.path1;Name=comp71982_c0_seq1;Dir=indeterminatecoverage=94.4;identity=99.2;matches=235;mismatches=2;indels=0;unknowns=0;Target=comp71982_c0_seq1 237 1 .;CDS_Target=comp71982_c0_seq1 29 3 .;locus=RLOC_00019095
Chr2	stalkie_big_nohaplotig	exon	84298163	84298399	99	-	.	Parent=comp71982_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84298371	84298397	.	-	0	Parent=comp71982_c0_seq1.mrna1
Chr2	gffcl	locus	84300203	84300604	.	-	.	ID=RLOC_00019096;geneIDs=comp151755_c0_seq1.path1;transcripts=comp151755_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84300203	84300604	.	-	.	ID=comp151755_c0_seq1.mrna1;geneID=comp151755_c0_seq1.path1;Name=comp151755_c0_seq1;Dir=indeterminatecoverage=75.1;identity=97.5;matches=392;mismatches=10;indels=0;unknowns=0;Target=comp151755_c0_seq1 535 134 .;CDS_Target=comp151755_c0_seq1 325 293 .;locus=RLOC_00019096
Chr2	stalkie_big_nohaplotig	exon	84300203	84300604	97	-	.	Parent=comp151755_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84300413	84300445	.	-	0	Parent=comp151755_c0_seq1.mrna1
Chr2	gffcl	locus	84302687	84302888	.	+	.	ID=RLOC_00019097;geneIDs=comp145272_c0_seq1.path1;transcripts=comp145272_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84302687	84302888	.	+	.	ID=comp145272_c0_seq1.mrna1;geneID=comp145272_c0_seq1.path1;Name=comp145272_c0_seq1;Dir=indeterminatecoverage=90.7;identity=95.6;matches=195;mismatches=7;indels=2;unknowns=0;Target=comp145272_c0_seq1 224 21 .;CDS_Target=comp145272_c0_seq1 41 21 .;locus=RLOC_00019097
Chr2	stalkie_big_nohaplotig	exon	84302687	84302888	95	+	.	Parent=comp145272_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84302687	84302707	.	+	0	Parent=comp145272_c0_seq1.mrna1
Chr2	gffcl	locus	84306010	84307163	.	+	.	ID=RLOC_00019098;geneIDs=comp163261_c0_seq1.path3;transcripts=comp163261_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	84306010	84307163	.	+	.	ID=comp163261_c0_seq1.mrna3;geneID=comp163261_c0_seq1.path3;Name=comp163261_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=1136;mismatches=18;indels=0;unknowns=0;Target=comp163261_c0_seq1 1154 1 .;CDS_Target=comp163261_c0_seq1 953 114 .;locus=RLOC_00019098
Chr2	stalkie_big_nohaplotig	exon	84306010	84307163	98	+	.	Parent=comp163261_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	CDS	84306123	84306962	.	+	0	Parent=comp163261_c0_seq1.mrna3
Chr2	gffcl	locus	84310311	84310601	.	-	.	ID=RLOC_00019099;geneIDs=comp146467_c0_seq1.path1;transcripts=comp146467_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84310311	84310601	.	-	.	ID=comp146467_c0_seq1.mrna1;geneID=comp146467_c0_seq1.path1;Name=comp146467_c0_seq1;Dir=indeterminatecoverage=85.8;identity=97.9;matches=285;mismatches=6;indels=0;unknowns=0;Target=comp146467_c0_seq1 312 22 .;CDS_Target=comp146467_c0_seq1 154 23 .;locus=RLOC_00019099
Chr2	stalkie_big_nohaplotig	exon	84310311	84310601	97	-	.	Parent=comp146467_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84310469	84310600	.	-	0	Parent=comp146467_c0_seq1.mrna1
Chr2	gffcl	locus	84314526	84319558	.	+	.	ID=RLOC_00019100;geneIDs=FBgn0037483.1.path2;transcripts=FBgn0037483.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	84314526	84319558	.	+	.	ID=FBgn0037483.1.mrna2;geneID=FBgn0037483.1.path2;Name=FBgn0037483.1;Dir=sensecoverage=100.0;identity=99.7;matches=1762;mismatches=5;indels=0;unknowns=0;locus=RLOC_00019100
Chr2	stalkie_big_nohaplotig	exon	84314526	84314715	100	+	.	Parent=FBgn0037483.1.mrna2;Target=FBgn0037483.1 1 190 +
Chr2	stalkie_big_nohaplotig	exon	84315387	84315691	99	+	.	Parent=FBgn0037483.1.mrna2;Target=FBgn0037483.1 191 495 +
Chr2	stalkie_big_nohaplotig	exon	84315758	84316063	100	+	.	Parent=FBgn0037483.1.mrna2;Target=FBgn0037483.1 496 801 +
Chr2	stalkie_big_nohaplotig	exon	84316128	84316384	100	+	.	Parent=FBgn0037483.1.mrna2;Target=FBgn0037483.1 802 1058 +
Chr2	stalkie_big_nohaplotig	exon	84318661	84318807	99	+	.	Parent=FBgn0037483.1.mrna2;Target=FBgn0037483.1 1059 1205 +
Chr2	stalkie_big_nohaplotig	exon	84318873	84319141	100	+	.	Parent=FBgn0037483.1.mrna2;Target=FBgn0037483.1 1206 1474 +
Chr2	stalkie_big_nohaplotig	exon	84319266	84319558	99	+	.	Parent=FBgn0037483.1.mrna2;Target=FBgn0037483.1 1475 1767 +
Chr2	stalkie_big_nohaplotig	CDS	84314526	84314715	.	+	0	Parent=FBgn0037483.1.mrna2;Target=FBgn0037483.1 1 190 +
Chr2	stalkie_big_nohaplotig	CDS	84315387	84315691	.	+	2	Parent=FBgn0037483.1.mrna2;Target=FBgn0037483.1 191 495 +
Chr2	stalkie_big_nohaplotig	CDS	84315758	84316063	.	+	0	Parent=FBgn0037483.1.mrna2;Target=FBgn0037483.1 496 801 +
Chr2	stalkie_big_nohaplotig	CDS	84316128	84316384	.	+	0	Parent=FBgn0037483.1.mrna2;Target=FBgn0037483.1 802 1058 +
Chr2	stalkie_big_nohaplotig	CDS	84318661	84318807	.	+	1	Parent=FBgn0037483.1.mrna2;Target=FBgn0037483.1 1059 1205 +
Chr2	stalkie_big_nohaplotig	CDS	84318873	84319141	.	+	1	Parent=FBgn0037483.1.mrna2;Target=FBgn0037483.1 1206 1474 +
Chr2	stalkie_big_nohaplotig	CDS	84319266	84319558	.	+	2	Parent=FBgn0037483.1.mrna2;Target=FBgn0037483.1 1475 1767 +
Chr2	gffcl	locus	84322340	84324450	.	+	.	ID=RLOC_00019101;geneIDs=comp146011_c0_seq1.path2;transcripts=comp146011_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	84322340	84324450	.	+	.	ID=comp146011_c0_seq1.mrna2;geneID=comp146011_c0_seq1.path2;Name=comp146011_c0_seq1;Dir=antisensecoverage=99.1;identity=99.0;matches=788;mismatches=8;indels=0;unknowns=0;locus=RLOC_00019101
Chr2	stalkie_big_nohaplotig	exon	84322340	84322642	99	+	.	Parent=comp146011_c0_seq1.mrna2;Target=comp146011_c0_seq1 495 797 -
Chr2	stalkie_big_nohaplotig	exon	84323906	84324176	99	+	.	Parent=comp146011_c0_seq1.mrna2;Target=comp146011_c0_seq1 224 494 -
Chr2	stalkie_big_nohaplotig	exon	84324229	84324450	98	+	.	Parent=comp146011_c0_seq1.mrna2;Target=comp146011_c0_seq1 2 223 -
Chr2	stalkie_big_nohaplotig	CDS	84322483	84322642	.	+	0	Parent=comp146011_c0_seq1.mrna2;Target=comp146011_c0_seq1 495 654 .
Chr2	stalkie_big_nohaplotig	CDS	84323906	84324078	.	+	2	Parent=comp146011_c0_seq1.mrna2;Target=comp146011_c0_seq1 322 494 .
Chr2	gffcl	locus	84462731	84475069	.	+	.	ID=RLOC_00019102;geneIDs=FBgn0037487.1.path1;transcripts=FBgn0037487.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84462731	84475069	.	+	.	ID=FBgn0037487.1.mrna1;geneID=FBgn0037487.1.path1;Name=FBgn0037487.1;Dir=sensecoverage=99.2;identity=99.4;matches=3718;mismatches=22;indels=0;unknowns=0;locus=RLOC_00019102
Chr2	stalkie_big_nohaplotig	exon	84462731	84462787	100	+	.	Parent=FBgn0037487.1.mrna1;Target=FBgn0037487.1 32 88 +
Chr2	stalkie_big_nohaplotig	exon	84471244	84471290	100	+	.	Parent=FBgn0037487.1.mrna1;Target=FBgn0037487.1 89 135 +
Chr2	stalkie_big_nohaplotig	exon	84471352	84471612	100	+	.	Parent=FBgn0037487.1.mrna1;Target=FBgn0037487.1 136 396 +
Chr2	stalkie_big_nohaplotig	exon	84471695	84475069	99	+	.	Parent=FBgn0037487.1.mrna1;Target=FBgn0037487.1 397 3771 +
Chr2	stalkie_big_nohaplotig	CDS	84462733	84462787	.	+	0	Parent=FBgn0037487.1.mrna1;Target=FBgn0037487.1 34 88 +
Chr2	stalkie_big_nohaplotig	CDS	84471244	84471290	.	+	2	Parent=FBgn0037487.1.mrna1;Target=FBgn0037487.1 89 135 +
Chr2	stalkie_big_nohaplotig	CDS	84471352	84471612	.	+	0	Parent=FBgn0037487.1.mrna1;Target=FBgn0037487.1 136 396 +
Chr2	stalkie_big_nohaplotig	CDS	84471695	84475069	.	+	0	Parent=FBgn0037487.1.mrna1;Target=FBgn0037487.1 397 3771 +
Chr2	gffcl	locus	84486627	84487743	.	+	.	ID=RLOC_00019103;geneIDs=FBgn0037488.1.path1;transcripts=FBgn0037488.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84486627	84487743	.	+	.	ID=FBgn0037488.1.mrna1;geneID=FBgn0037488.1.path1;Name=FBgn0037488.1;Dir=indeterminatecoverage=99.6;identity=99.3;matches=1109;mismatches=8;indels=0;unknowns=0;Target=FBgn0037488.1 1122 6 .;CDS_Target=FBgn0037488.1 1122 7 .;locus=RLOC_00019103
Chr2	stalkie_big_nohaplotig	exon	84486627	84487743	99	+	.	Parent=FBgn0037488.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84486628	84487743	.	+	0	Parent=FBgn0037488.1.mrna1
Chr2	gffcl	locus	84489777	84492167	.	+	.	ID=RLOC_00019104;geneIDs=FBgn0040333.1.path1;transcripts=FBgn0040333.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84489777	84492167	.	+	.	ID=FBgn0040333.1.mrna1;geneID=FBgn0040333.1.path1;Name=FBgn0040333.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=2378;mismatches=13;indels=0;unknowns=0;Target=FBgn0040333.1 2391 1 .;locus=RLOC_00019104
Chr2	stalkie_big_nohaplotig	exon	84489777	84492167	99	+	.	Parent=FBgn0040333.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84489777	84492167	.	+	0	Parent=FBgn0040333.1.mrna1
Chr2	gffcl	locus	84497414	84498066	.	+	.	ID=RLOC_00019105;geneIDs=comp151283_c0_seq1.path1;transcripts=comp151283_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84497414	84498066	.	+	.	ID=comp151283_c0_seq1.mrna1;geneID=comp151283_c0_seq1.path1;Name=comp151283_c0_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=558;mismatches=5;indels=0;unknowns=0;locus=RLOC_00019105
Chr2	stalkie_big_nohaplotig	exon	84497414	84497560	100	+	.	Parent=comp151283_c0_seq1.mrna1;Target=comp151283_c0_seq1 417 563 -
Chr2	stalkie_big_nohaplotig	exon	84497651	84498066	98	+	.	Parent=comp151283_c0_seq1.mrna1;Target=comp151283_c0_seq1 1 416 -
Chr2	stalkie_big_nohaplotig	CDS	84497504	84497560	.	+	0	Parent=comp151283_c0_seq1.mrna1;Target=comp151283_c0_seq1 417 473 .
Chr2	stalkie_big_nohaplotig	CDS	84497651	84497980	.	+	0	Parent=comp151283_c0_seq1.mrna1;Target=comp151283_c0_seq1 87 416 .
Chr2	gffcl	locus	84508289	84515823	.	+	.	ID=RLOC_00019106;geneIDs=FBgn0014018.1.path1,comp159346_c2_seq1.path1;transcripts=FBgn0014018.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84508289	84515743	.	+	.	ID=FBgn0014018.1.mrna1;geneID=FBgn0014018.1.path1;Name=FBgn0014018.1;Dir=sensecoverage=100.0;identity=99.9;matches=3163;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019106
Chr2	stalkie_big_nohaplotig	exon	84508289	84508489	100	+	.	Parent=FBgn0014018.1.mrna1;Target=FBgn0014018.1 1 201 +
Chr2	stalkie_big_nohaplotig	exon	84512713	84513564	100	+	.	Parent=FBgn0014018.1.mrna1;Target=FBgn0014018.1 202 1053 +
Chr2	stalkie_big_nohaplotig	exon	84513632	84515743	99	+	.	Parent=FBgn0014018.1.mrna1;Target=FBgn0014018.1 1054 3165 +
Chr2	stalkie_big_nohaplotig	CDS	84508289	84508489	.	+	0	Parent=FBgn0014018.1.mrna1;Target=FBgn0014018.1 1 201 +
Chr2	stalkie_big_nohaplotig	CDS	84512713	84513564	.	+	0	Parent=FBgn0014018.1.mrna1;Target=FBgn0014018.1 202 1053 +
Chr2	stalkie_big_nohaplotig	CDS	84513632	84515743	.	+	0	Parent=FBgn0014018.1.mrna1;Target=FBgn0014018.1 1054 3165 +
Chr2	gffcl	locus	84508631	84524324	.	+	.	ID=RLOC_00019107;geneIDs=FBgn0010222.1.path1;transcripts=FBgn0010222.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84508631	84524324	.	+	.	ID=FBgn0010222.1.mrna1;geneID=FBgn0010222.1.path1;Name=FBgn0010222.1;Dir=sensecoverage=100.0;identity=99.3;matches=1126;mismatches=8;indels=0;unknowns=0;locus=RLOC_00019107
Chr2	stalkie_big_nohaplotig	exon	84508631	84508836	98	+	.	Parent=FBgn0010222.1.mrna1;Target=FBgn0010222.1 1 206 +
Chr2	stalkie_big_nohaplotig	exon	84523329	84524116	99	+	.	Parent=FBgn0010222.1.mrna1;Target=FBgn0010222.1 207 994 +
Chr2	stalkie_big_nohaplotig	exon	84524185	84524324	100	+	.	Parent=FBgn0010222.1.mrna1;Target=FBgn0010222.1 995 1134 +
Chr2	stalkie_big_nohaplotig	CDS	84508631	84508836	.	+	0	Parent=FBgn0010222.1.mrna1;Target=FBgn0010222.1 1 206 +
Chr2	stalkie_big_nohaplotig	CDS	84523329	84524116	.	+	1	Parent=FBgn0010222.1.mrna1;Target=FBgn0010222.1 207 994 +
Chr2	stalkie_big_nohaplotig	CDS	84524185	84524324	.	+	2	Parent=FBgn0010222.1.mrna1;Target=FBgn0010222.1 995 1134 +
Chr2	gffcl	locus	84528168	84530061	.	+	.	ID=RLOC_00019108;geneIDs=FBgn0085190.1.path1;transcripts=FBgn0085190.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84528168	84530061	.	+	.	ID=FBgn0085190.1.mrna1;geneID=FBgn0085190.1.path1;Name=FBgn0085190.1;Dir=sensecoverage=100.0;identity=100.0;matches=441;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019108
Chr2	stalkie_big_nohaplotig	exon	84528168	84528369	100	+	.	Parent=FBgn0085190.1.mrna1;Target=FBgn0085190.1 1 202 +
Chr2	stalkie_big_nohaplotig	exon	84528432	84528448	100	+	.	Parent=FBgn0085190.1.mrna1;Target=FBgn0085190.1 203 219 +
Chr2	stalkie_big_nohaplotig	exon	84529770	84529879	100	+	.	Parent=FBgn0085190.1.mrna1;Target=FBgn0085190.1 220 329 +
Chr2	stalkie_big_nohaplotig	exon	84529950	84530061	100	+	.	Parent=FBgn0085190.1.mrna1;Target=FBgn0085190.1 330 441 +
Chr2	stalkie_big_nohaplotig	CDS	84528168	84528369	.	+	0	Parent=FBgn0085190.1.mrna1;Target=FBgn0085190.1 1 202 +
Chr2	stalkie_big_nohaplotig	CDS	84528432	84528448	.	+	2	Parent=FBgn0085190.1.mrna1;Target=FBgn0085190.1 203 219 +
Chr2	stalkie_big_nohaplotig	CDS	84529770	84529879	.	+	0	Parent=FBgn0085190.1.mrna1;Target=FBgn0085190.1 220 329 +
Chr2	stalkie_big_nohaplotig	CDS	84529950	84530061	.	+	1	Parent=FBgn0085190.1.mrna1;Target=FBgn0085190.1 330 441 +
Chr2	gffcl	locus	84530958	84532161	.	+	.	ID=RLOC_00019109;geneIDs=comp159409_c0_seq1.path1;transcripts=comp159409_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84530958	84532161	.	+	.	ID=comp159409_c0_seq1.mrna1;geneID=comp159409_c0_seq1.path1;Name=comp159409_c0_seq1;Dir=antisensecoverage=100.0;identity=91.7;matches=1081;mismatches=19;indels=79;unknowns=0;Target=comp159409_c0_seq1 965 1096 .;locus=RLOC_00019109
Chr2	stalkie_big_nohaplotig	exon	84530958	84531629	92	+	.	Parent=comp159409_c0_seq1.mrna1;Target=comp159409_c0_seq1 508 1139 -
Chr2	stalkie_big_nohaplotig	exon	84531694	84532161	90	+	.	Parent=comp159409_c0_seq1.mrna1;Target=comp159409_c0_seq1 1 507 -
Chr2	stalkie_big_nohaplotig	CDS	84531001	84531132	.	+	0	Parent=comp159409_c0_seq1.mrna1
Chr2	gffcl	locus	84533493	84536315	.	-	.	ID=RLOC_00019110;geneIDs=FBgn0038365.1.path1;transcripts=FBgn0038365.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84533493	84536315	.	-	.	ID=FBgn0038365.1.mrna1;geneID=FBgn0038365.1.path1;Name=FBgn0038365.1;Dir=sensecoverage=100.0;identity=99.6;matches=1276;mismatches=4;indels=1;unknowns=0;Target=FBgn0038365.1 3 35 +;locus=RLOC_00019110
Chr2	stalkie_big_nohaplotig	exon	84533493	84533571	100	-	.	Parent=FBgn0038365.1.mrna1;Target=FBgn0038365.1 1203 1281 +
Chr2	stalkie_big_nohaplotig	exon	84533683	84534071	99	-	.	Parent=FBgn0038365.1.mrna1;Target=FBgn0038365.1 814 1202 +
Chr2	stalkie_big_nohaplotig	exon	84534141	84534298	100	-	.	Parent=FBgn0038365.1.mrna1;Target=FBgn0038365.1 656 813 +
Chr2	stalkie_big_nohaplotig	exon	84535607	84535759	100	-	.	Parent=FBgn0038365.1.mrna1;Target=FBgn0038365.1 503 655 +
Chr2	stalkie_big_nohaplotig	exon	84535815	84536315	99	-	.	Parent=FBgn0038365.1.mrna1;Target=FBgn0038365.1 1 502 +
Chr2	stalkie_big_nohaplotig	CDS	84536282	84536313	.	-	0	Parent=FBgn0038365.1.mrna1
Chr2	gffcl	locus	84539359	84540526	.	.	.	ID=RLOC_00019111;geneIDs=comp66209_c0_seq1.path1,comp118506_c0_seq1.path1,comp135465_c0_seq1.path1;transcripts=comp135465_c0_seq1.mrna1,comp66209_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84539359	84539891	.	-	.	ID=comp135465_c0_seq1.mrna1;geneID=comp135465_c0_seq1.path1;Name=comp135465_c0_seq1;Dir=indeterminatecoverage=96.9;identity=99.8;matches=532;mismatches=1;indels=0;unknowns=0;Target=comp135465_c0_seq1 535 3 .;CDS_Target=comp135465_c0_seq1 349 284 .;locus=RLOC_00019111
Chr2	stalkie_big_nohaplotig	exon	84539359	84539891	99	-	.	Parent=comp135465_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84539545	84539610	.	-	0	Parent=comp135465_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84540050	84540526	.	+	.	ID=comp66209_c0_seq1.mrna1;geneID=comp66209_c0_seq1.path1;Name=comp66209_c0_seq1;Dir=indeterminatecoverage=86.5;identity=99.2;matches=475;mismatches=2;indels=2;unknowns=0;Target=comp66209_c0_seq1 515 37 .;CDS_Target=comp66209_c0_seq1 140 39 .;locus=RLOC_00019111
Chr2	stalkie_big_nohaplotig	exon	84540050	84540526	99	+	.	Parent=comp66209_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84540052	84540151	.	+	0	Parent=comp66209_c0_seq1.mrna1
Chr2	gffcl	locus	84540921	84551661	.	-	.	ID=RLOC_00019112;geneIDs=FBgn0262527.1.path1;transcripts=FBgn0262527.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84540921	84551661	.	-	.	ID=FBgn0262527.1.mrna1;geneID=FBgn0262527.1.path1;Name=FBgn0262527.1;Dir=sensecoverage=100.0;identity=99.7;matches=4658;mismatches=13;indels=0;unknowns=0;locus=RLOC_00019112
Chr2	stalkie_big_nohaplotig	exon	84540921	84541430	99	-	.	Parent=FBgn0262527.1.mrna1;Target=FBgn0262527.1 4162 4671 +
Chr2	stalkie_big_nohaplotig	exon	84545067	84545194	100	-	.	Parent=FBgn0262527.1.mrna1;Target=FBgn0262527.1 4034 4161 +
Chr2	stalkie_big_nohaplotig	exon	84545259	84545337	100	-	.	Parent=FBgn0262527.1.mrna1;Target=FBgn0262527.1 3955 4033 +
Chr2	stalkie_big_nohaplotig	exon	84545396	84546038	99	-	.	Parent=FBgn0262527.1.mrna1;Target=FBgn0262527.1 3312 3954 +
Chr2	stalkie_big_nohaplotig	exon	84547057	84547173	100	-	.	Parent=FBgn0262527.1.mrna1;Target=FBgn0262527.1 3195 3311 +
Chr2	stalkie_big_nohaplotig	exon	84547245	84547674	100	-	.	Parent=FBgn0262527.1.mrna1;Target=FBgn0262527.1 2765 3194 +
Chr2	stalkie_big_nohaplotig	exon	84548056	84548310	100	-	.	Parent=FBgn0262527.1.mrna1;Target=FBgn0262527.1 2510 2764 +
Chr2	stalkie_big_nohaplotig	exon	84548371	84548531	100	-	.	Parent=FBgn0262527.1.mrna1;Target=FBgn0262527.1 2349 2509 +
Chr2	stalkie_big_nohaplotig	exon	84549190	84549489	100	-	.	Parent=FBgn0262527.1.mrna1;Target=FBgn0262527.1 2049 2348 +
Chr2	stalkie_big_nohaplotig	exon	84549545	84550586	99	-	.	Parent=FBgn0262527.1.mrna1;Target=FBgn0262527.1 1007 2048 +
Chr2	stalkie_big_nohaplotig	exon	84550656	84551661	99	-	.	Parent=FBgn0262527.1.mrna1;Target=FBgn0262527.1 1 1006 +
Chr2	stalkie_big_nohaplotig	CDS	84540921	84541430	.	-	0	Parent=FBgn0262527.1.mrna1;Target=FBgn0262527.1 4162 4671 +
Chr2	stalkie_big_nohaplotig	CDS	84545067	84545194	.	-	2	Parent=FBgn0262527.1.mrna1;Target=FBgn0262527.1 4034 4161 +
Chr2	stalkie_big_nohaplotig	CDS	84545259	84545337	.	-	0	Parent=FBgn0262527.1.mrna1;Target=FBgn0262527.1 3955 4033 +
Chr2	stalkie_big_nohaplotig	CDS	84545396	84546038	.	-	1	Parent=FBgn0262527.1.mrna1;Target=FBgn0262527.1 3312 3954 +
Chr2	stalkie_big_nohaplotig	CDS	84547057	84547173	.	-	1	Parent=FBgn0262527.1.mrna1;Target=FBgn0262527.1 3195 3311 +
Chr2	stalkie_big_nohaplotig	CDS	84547245	84547674	.	-	2	Parent=FBgn0262527.1.mrna1;Target=FBgn0262527.1 2765 3194 +
Chr2	stalkie_big_nohaplotig	CDS	84548056	84548310	.	-	2	Parent=FBgn0262527.1.mrna1;Target=FBgn0262527.1 2510 2764 +
Chr2	stalkie_big_nohaplotig	CDS	84548371	84548531	.	-	1	Parent=FBgn0262527.1.mrna1;Target=FBgn0262527.1 2349 2509 +
Chr2	stalkie_big_nohaplotig	CDS	84549190	84549489	.	-	1	Parent=FBgn0262527.1.mrna1;Target=FBgn0262527.1 2049 2348 +
Chr2	stalkie_big_nohaplotig	CDS	84549545	84550586	.	-	2	Parent=FBgn0262527.1.mrna1;Target=FBgn0262527.1 1007 2048 +
Chr2	stalkie_big_nohaplotig	CDS	84550656	84551661	.	-	0	Parent=FBgn0262527.1.mrna1;Target=FBgn0262527.1 1 1006 +
Chr2	gffcl	locus	84557686	84559395	.	+	.	ID=RLOC_00019113;geneIDs=FBgn0044826.1.path1;transcripts=FBgn0044826.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84557686	84559395	.	+	.	ID=FBgn0044826.1.mrna1;geneID=FBgn0044826.1.path1;Name=FBgn0044826.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1702;mismatches=8;indels=0;unknowns=0;Target=FBgn0044826.1 1710 1 .;locus=RLOC_00019113
Chr2	stalkie_big_nohaplotig	exon	84557686	84559395	99	+	.	Parent=FBgn0044826.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84557686	84559395	.	+	0	Parent=FBgn0044826.1.mrna1
Chr2	gffcl	locus	84580405	84581220	.	-	.	ID=RLOC_00019114;geneIDs=comp154924_c0_seq1.path1;transcripts=comp154924_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84580405	84581220	.	-	.	ID=comp154924_c0_seq1.mrna1;geneID=comp154924_c0_seq1.path1;Name=comp154924_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=794;mismatches=22;indels=1;unknowns=0;Target=comp154924_c0_seq1 817 1 .;CDS_Target=comp154924_c0_seq1 587 465 .;locus=RLOC_00019114
Chr2	stalkie_big_nohaplotig	exon	84580405	84581220	97	-	.	Parent=comp154924_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84580634	84580756	.	-	0	Parent=comp154924_c0_seq1.mrna1
Chr2	gffcl	locus	84581357	84583356	.	-	.	ID=RLOC_00019115;geneIDs=comp160405_c0_seq1.path1;transcripts=comp160405_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84581357	84583356	.	-	.	ID=comp160405_c0_seq1.mrna1;geneID=comp160405_c0_seq1.path1;Name=comp160405_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1981;mismatches=19;indels=6;unknowns=0;Target=comp160405_c0_seq1 2006 1 .;CDS_Target=comp160405_c0_seq1 1010 873 .;locus=RLOC_00019115
Chr2	stalkie_big_nohaplotig	exon	84581357	84583356	98	-	.	Parent=comp160405_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84582351	84582488	.	-	0	Parent=comp160405_c0_seq1.mrna1
Chr2	gffcl	locus	84599828	86558053	.	.	.	ID=RLOC_00019116;geneIDs=comp154050_c0_seq1.path1,comp163942_c1_seq1.path1;transcripts=comp163942_c1_seq1.mrna1,comp154050_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84599828	86558053	.	-	.	ID=comp163942_c1_seq1.mrna1;geneID=comp163942_c1_seq1.path1;Name=comp163942_c1_seq1;Dir=sensecoverage=67.9;identity=96.4;matches=4489;mismatches=46;indels=120;unknowns=0;locus=RLOC_00019116
Chr2	stalkie_big_nohaplotig	exon	84599828	84599840	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 5311 5323 +
Chr2	stalkie_big_nohaplotig	exon	84600691	84600692	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 5309 5310 +
Chr2	stalkie_big_nohaplotig	exon	84602982	84602991	31	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 5280 5308 +
Chr2	stalkie_big_nohaplotig	exon	84603059	84603081	48	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 5245 5279 +
Chr2	stalkie_big_nohaplotig	exon	84603197	84603204	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 5192 5199 +
Chr2	stalkie_big_nohaplotig	exon	84608912	84608927	75	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 5164 5179 +
Chr2	stalkie_big_nohaplotig	exon	84630307	84630319	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 5151 5163 +
Chr2	stalkie_big_nohaplotig	exon	84652543	84652551	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 5142 5150 +
Chr2	stalkie_big_nohaplotig	exon	84656944	84656947	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 5138 5141 +
Chr2	stalkie_big_nohaplotig	exon	84656965	84656970	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 5087 5092 +
Chr2	stalkie_big_nohaplotig	exon	84667676	84667685	83	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 5050 5061 +
Chr2	stalkie_big_nohaplotig	exon	84680406	84680418	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 5002 5014 +
Chr2	stalkie_big_nohaplotig	exon	84684586	84684594	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4992 5000 +
Chr2	stalkie_big_nohaplotig	exon	84684632	84684642	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4932 4942 +
Chr2	stalkie_big_nohaplotig	exon	84690525	84690532	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4911 4918 +
Chr2	stalkie_big_nohaplotig	exon	84693700	84693734	57	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4873 4910 +
Chr2	stalkie_big_nohaplotig	exon	84709552	84709561	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4811 4820 +
Chr2	stalkie_big_nohaplotig	exon	84711719	84711725	20	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4776 4810 +
Chr2	stalkie_big_nohaplotig	exon	84712873	84712882	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4765 4774 +
Chr2	stalkie_big_nohaplotig	exon	84716544	84716551	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4727 4734 +
Chr2	stalkie_big_nohaplotig	exon	84720082	84720088	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4720 4726 +
Chr2	stalkie_big_nohaplotig	exon	84720115	84720124	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4689 4698 +
Chr2	stalkie_big_nohaplotig	exon	84730344	84730379	44	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4661 4676 +
Chr2	stalkie_big_nohaplotig	exon	84733088	84733094	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4654 4660 +
Chr2	stalkie_big_nohaplotig	exon	84748397	84748404	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4557 4564 +
Chr2	stalkie_big_nohaplotig	exon	84749258	84749261	50	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4507 4508 +
Chr2	stalkie_big_nohaplotig	exon	84750674	84750680	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4429 4435 +
Chr2	stalkie_big_nohaplotig	exon	84775153	84775158	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4423 4428 +
Chr2	stalkie_big_nohaplotig	exon	84798156	84798168	92	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4394 4406 +
Chr2	stalkie_big_nohaplotig	exon	84809196	84809202	85	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4387 4393 +
Chr2	stalkie_big_nohaplotig	exon	84816487	84816491	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4382 4386 +
Chr2	stalkie_big_nohaplotig	exon	84822363	84822371	77	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4373 4381 +
Chr2	stalkie_big_nohaplotig	exon	84825700	84825709	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4363 4372 +
Chr2	stalkie_big_nohaplotig	exon	84830703	84830712	30	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4333 4362 +
Chr2	stalkie_big_nohaplotig	exon	84845140	84845150	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4299 4309 +
Chr2	stalkie_big_nohaplotig	exon	84845442	84845444	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4296 4298 +
Chr2	stalkie_big_nohaplotig	exon	84845845	84845849	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4291 4295 +
Chr2	stalkie_big_nohaplotig	exon	84845873	84845880	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4266 4273 +
Chr2	stalkie_big_nohaplotig	exon	84845979	84845983	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4261 4265 +
Chr2	stalkie_big_nohaplotig	exon	84847208	84847220	92	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4249 4260 +
Chr2	stalkie_big_nohaplotig	exon	84851512	84851517	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4243 4248 +
Chr2	stalkie_big_nohaplotig	exon	84866278	84866282	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4224 4228 +
Chr2	stalkie_big_nohaplotig	exon	84895101	84895105	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4219 4223 +
Chr2	stalkie_big_nohaplotig	exon	85379564	85379573	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4177 4186 +
Chr2	stalkie_big_nohaplotig	exon	85381771	85381774	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4173 4176 +
Chr2	stalkie_big_nohaplotig	exon	85386337	85386339	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4170 4172 +
Chr2	stalkie_big_nohaplotig	exon	85386371	85386379	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4112 4120 +
Chr2	stalkie_big_nohaplotig	exon	85392680	85392683	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4108 4111 +
Chr2	stalkie_big_nohaplotig	exon	85400183	85400193	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4096 4106 +
Chr2	stalkie_big_nohaplotig	exon	85407188	85407193	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4090 4095 +
Chr2	stalkie_big_nohaplotig	exon	86507747	86507766	75	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4071 4089 +
Chr2	stalkie_big_nohaplotig	exon	86523611	86523619	88	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4062 4070 +
Chr2	stalkie_big_nohaplotig	exon	86524625	86524626	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4060 4061 +
Chr2	stalkie_big_nohaplotig	exon	86531932	86531936	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4055 4059 +
Chr2	stalkie_big_nohaplotig	exon	86533601	86533606	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4043 4048 +
Chr2	stalkie_big_nohaplotig	exon	86547530	86547534	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4038 4042 +
Chr2	stalkie_big_nohaplotig	exon	86550461	86550463	100	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 4035 4037 +
Chr2	stalkie_big_nohaplotig	exon	86553539	86555820	99	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 1751 4034 +
Chr2	stalkie_big_nohaplotig	exon	86555913	86557156	99	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 507 1750 +
Chr2	stalkie_big_nohaplotig	exon	86557445	86557546	99	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 405 506 +
Chr2	stalkie_big_nohaplotig	exon	86557650	86558053	99	-	.	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 1 404 +
Chr2	stalkie_big_nohaplotig	CDS	86553721	86555820	.	-	0	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 1751 3853 +
Chr2	stalkie_big_nohaplotig	CDS	86555913	86557156	.	-	2	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 507 1750 +
Chr2	stalkie_big_nohaplotig	CDS	86557445	86557546	.	-	2	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 405 506 +
Chr2	stalkie_big_nohaplotig	CDS	86557650	86557926	.	-	0	Parent=comp163942_c1_seq1.mrna1;Target=comp163942_c1_seq1 128 404 +
Chr2	stalkie_big_nohaplotig	mRNA	84846630	84847527	.	+	.	ID=comp154050_c0_seq1.mrna1;geneID=comp154050_c0_seq1.path1;Name=comp154050_c0_seq1;Dir=indeterminatecoverage=98.2;identity=98.8;matches=887;mismatches=11;indels=0;unknowns=0;Target=comp154050_c0_seq1 899 2 .;CDS_Target=comp154050_c0_seq1 596 477 .;locus=RLOC_00019116
Chr2	stalkie_big_nohaplotig	exon	84846630	84847527	98	+	.	Parent=comp154050_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84847105	84847224	.	+	0	Parent=comp154050_c0_seq1.mrna1
Chr2	gffcl	locus	84660124	84691549	.	-	.	ID=RLOC_00019118;geneIDs=FBgn0037589.1.path1,comp156918_c0_seq1.path1;transcripts=comp156918_c0_seq1.mrna1,FBgn0037589.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84660124	84691549	.	-	.	ID=comp156918_c0_seq1.mrna1;geneID=comp156918_c0_seq1.path1;Name=comp156918_c0_seq1;Dir=antisensecoverage=92.4;identity=97.1;matches=1237;mismatches=27;indels=10;unknowns=0;locus=RLOC_00019118
Chr2	stalkie_big_nohaplotig	exon	84660124	84660889	95	-	.	Parent=comp156918_c0_seq1.mrna1;Target=comp156918_c0_seq1 5 771 -
Chr2	stalkie_big_nohaplotig	exon	84688814	84688957	98	-	.	Parent=comp156918_c0_seq1.mrna1;Target=comp156918_c0_seq1 772 915 -
Chr2	stalkie_big_nohaplotig	exon	84690263	84690428	98	-	.	Parent=comp156918_c0_seq1.mrna1;Target=comp156918_c0_seq1 916 1081 -
Chr2	stalkie_big_nohaplotig	exon	84691298	84691429	98	-	.	Parent=comp156918_c0_seq1.mrna1;Target=comp156918_c0_seq1 1082 1214 -
Chr2	stalkie_big_nohaplotig	exon	84691490	84691549	100	-	.	Parent=comp156918_c0_seq1.mrna1;Target=comp156918_c0_seq1 1215 1274 -
Chr2	stalkie_big_nohaplotig	CDS	84691317	84691429	.	-	0	Parent=comp156918_c0_seq1.mrna1;Target=comp156918_c0_seq1 1101 1214 .
Chr2	stalkie_big_nohaplotig	CDS	84691490	84691549	.	-	0	Parent=comp156918_c0_seq1.mrna1;Target=comp156918_c0_seq1 1215 1274 .
Chr2	stalkie_big_nohaplotig	mRNA	84688749	84691401	.	-	.	ID=FBgn0037589.1.mrna1;geneID=FBgn0037589.1.path1;Name=FBgn0037589.1;Dir=sensecoverage=100.0;identity=98.5;matches=473;mismatches=6;indels=1;unknowns=0;Target=FBgn0037589.1 3 86 +;locus=RLOC_00019118
Chr2	stalkie_big_nohaplotig	exon	84688749	84688957	98	-	.	Parent=FBgn0037589.1.mrna1;Target=FBgn0037589.1 272 480 +
Chr2	stalkie_big_nohaplotig	exon	84690263	84690428	98	-	.	Parent=FBgn0037589.1.mrna1;Target=FBgn0037589.1 106 271 +
Chr2	stalkie_big_nohaplotig	exon	84691298	84691401	98	-	.	Parent=FBgn0037589.1.mrna1;Target=FBgn0037589.1 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	84691317	84691399	.	-	0	Parent=FBgn0037589.1.mrna1
Chr2	gffcl	locus	84701835	84702463	.	-	.	ID=RLOC_00019119;geneIDs=comp156204_c0_seq1.path1;transcripts=comp156204_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84701835	84702463	.	-	.	ID=comp156204_c0_seq1.mrna1;geneID=comp156204_c0_seq1.path1;Name=comp156204_c0_seq1;Dir=indeterminatecoverage=92.5;identity=97.6;matches=615;mismatches=14;indels=1;unknowns=0;Target=comp156204_c0_seq1 630 1 .;CDS_Target=comp156204_c0_seq1 146 3 .;locus=RLOC_00019119
Chr2	stalkie_big_nohaplotig	exon	84701835	84702463	97	-	.	Parent=comp156204_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84702318	84702461	.	-	0	Parent=comp156204_c0_seq1.mrna1
Chr2	gffcl	locus	84772911	84782820	.	-	.	ID=RLOC_00019121;geneIDs=FBgn0004118.1.path1;transcripts=FBgn0004118.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84772911	84782820	.	-	.	ID=FBgn0004118.1.mrna1;geneID=FBgn0004118.1.path1;Name=FBgn0004118.1;Dir=sensecoverage=74.6;identity=99.4;matches=1163;mismatches=7;indels=0;unknowns=0;locus=RLOC_00019121
Chr2	stalkie_big_nohaplotig	exon	84772911	84773064	100	-	.	Parent=FBgn0004118.1.mrna1;Target=FBgn0004118.1 1017 1170 +
Chr2	stalkie_big_nohaplotig	exon	84773201	84773376	98	-	.	Parent=FBgn0004118.1.mrna1;Target=FBgn0004118.1 841 1016 +
Chr2	stalkie_big_nohaplotig	exon	84779646	84779773	99	-	.	Parent=FBgn0004118.1.mrna1;Target=FBgn0004118.1 713 840 +
Chr2	stalkie_big_nohaplotig	exon	84779897	84780029	100	-	.	Parent=FBgn0004118.1.mrna1;Target=FBgn0004118.1 580 712 +
Chr2	stalkie_big_nohaplotig	exon	84781293	84781478	100	-	.	Parent=FBgn0004118.1.mrna1;Target=FBgn0004118.1 394 579 +
Chr2	stalkie_big_nohaplotig	exon	84781607	84781735	97	-	.	Parent=FBgn0004118.1.mrna1;Target=FBgn0004118.1 265 393 +
Chr2	stalkie_big_nohaplotig	exon	84781818	84782011	100	-	.	Parent=FBgn0004118.1.mrna1;Target=FBgn0004118.1 71 264 +
Chr2	stalkie_big_nohaplotig	exon	84782751	84782820	100	-	.	Parent=FBgn0004118.1.mrna1;Target=FBgn0004118.1 1 70 +
Chr2	stalkie_big_nohaplotig	CDS	84772911	84773064	.	-	1	Parent=FBgn0004118.1.mrna1;Target=FBgn0004118.1 1017 1170 +
Chr2	stalkie_big_nohaplotig	CDS	84773201	84773376	.	-	0	Parent=FBgn0004118.1.mrna1;Target=FBgn0004118.1 841 1016 +
Chr2	stalkie_big_nohaplotig	CDS	84779646	84779773	.	-	2	Parent=FBgn0004118.1.mrna1;Target=FBgn0004118.1 713 840 +
Chr2	stalkie_big_nohaplotig	CDS	84779897	84780029	.	-	0	Parent=FBgn0004118.1.mrna1;Target=FBgn0004118.1 580 712 +
Chr2	stalkie_big_nohaplotig	CDS	84781293	84781478	.	-	0	Parent=FBgn0004118.1.mrna1;Target=FBgn0004118.1 394 579 +
Chr2	stalkie_big_nohaplotig	CDS	84781607	84781735	.	-	0	Parent=FBgn0004118.1.mrna1;Target=FBgn0004118.1 265 393 +
Chr2	stalkie_big_nohaplotig	CDS	84781818	84782011	.	-	2	Parent=FBgn0004118.1.mrna1;Target=FBgn0004118.1 71 264 +
Chr2	stalkie_big_nohaplotig	CDS	84782751	84782820	.	-	0	Parent=FBgn0004118.1.mrna1;Target=FBgn0004118.1 1 70 +
Chr2	gffcl	locus	84775218	84779128	.	-	.	ID=RLOC_00019122;geneIDs=comp158260_c0_seq1.path2;transcripts=comp158260_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	84775218	84779128	.	-	.	ID=comp158260_c0_seq1.mrna2;geneID=comp158260_c0_seq1.path2;Name=comp158260_c0_seq1;Dir=indeterminatecoverage=72.4;identity=86.2;matches=1160;mismatches=40;indels=145;unknowns=0;Target=comp158260_c0_seq1 385 230 .;locus=RLOC_00019122
Chr2	stalkie_big_nohaplotig	exon	84775218	84775226	100	-	.	Parent=comp158260_c0_seq1.mrna2;Target=comp158260_c0_seq1 1317 1309 .
Chr2	stalkie_big_nohaplotig	exon	84777739	84777742	100	-	.	Parent=comp158260_c0_seq1.mrna2;Target=comp158260_c0_seq1 1308 1305 .
Chr2	stalkie_big_nohaplotig	exon	84777911	84779128	86	-	.	Parent=comp158260_c0_seq1.mrna2;Target=comp158260_c0_seq1 1304 4 .
Chr2	stalkie_big_nohaplotig	CDS	84778778	84778902	.	-	0	Parent=comp158260_c0_seq1.mrna2
Chr2	gffcl	locus	84776317	84776693	.	-	.	ID=RLOC_00019123;geneIDs=comp161239_c2_seq1.path1;transcripts=comp161239_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84776317	84776693	.	-	.	ID=comp161239_c2_seq1.mrna1;geneID=comp161239_c2_seq1.path1;Name=comp161239_c2_seq1;Dir=indeterminatecoverage=37.7;identity=96.8;matches=365;mismatches=12;indels=0;unknowns=0;Target=comp161239_c2_seq1 377 1 .;locus=RLOC_00019123
Chr2	stalkie_big_nohaplotig	exon	84776317	84776693	96	-	.	Parent=comp161239_c2_seq1.mrna1
Chr2	gffcl	locus	84784778	84785953	.	+	.	ID=RLOC_00019124;geneIDs=FBgn0039201.path1;transcripts=FBgn0039201.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84784778	84785953	.	+	.	ID=FBgn0039201.mrna1;geneID=FBgn0039201.path1;Name=FBgn0039201;Dir=sensecoverage=98.9;identity=98.5;matches=1090;mismatches=17;indels=0;unknowns=0;locus=RLOC_00019124
Chr2	stalkie_big_nohaplotig	exon	84784778	84784892	99	+	.	Parent=FBgn0039201.mrna1;Target=FBgn0039201 1 115 +
Chr2	stalkie_big_nohaplotig	exon	84784962	84785953	98	+	.	Parent=FBgn0039201.mrna1;Target=FBgn0039201 116 1107 +
Chr2	stalkie_big_nohaplotig	CDS	84784778	84784892	.	+	0	Parent=FBgn0039201.mrna1;Target=FBgn0039201 1 115 +
Chr2	stalkie_big_nohaplotig	CDS	84784962	84785953	.	+	2	Parent=FBgn0039201.mrna1;Target=FBgn0039201 116 1107 +
Chr2	gffcl	locus	84789915	84790714	.	-	.	ID=RLOC_00019125;geneIDs=FBgn0039403.1.path1;transcripts=FBgn0039403.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84789915	84790714	.	-	.	ID=FBgn0039403.1.mrna1;geneID=FBgn0039403.1.path1;Name=FBgn0039403.1;Dir=sensecoverage=100.0;identity=99.7;matches=670;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019125
Chr2	stalkie_big_nohaplotig	exon	84789915	84790033	100	-	.	Parent=FBgn0039403.1.mrna1;Target=FBgn0039403.1 554 672 +
Chr2	stalkie_big_nohaplotig	exon	84790101	84790554	99	-	.	Parent=FBgn0039403.1.mrna1;Target=FBgn0039403.1 100 553 +
Chr2	stalkie_big_nohaplotig	exon	84790616	84790714	100	-	.	Parent=FBgn0039403.1.mrna1;Target=FBgn0039403.1 1 99 +
Chr2	stalkie_big_nohaplotig	CDS	84789915	84790033	.	-	2	Parent=FBgn0039403.1.mrna1;Target=FBgn0039403.1 554 672 +
Chr2	stalkie_big_nohaplotig	CDS	84790101	84790554	.	-	0	Parent=FBgn0039403.1.mrna1;Target=FBgn0039403.1 100 553 +
Chr2	stalkie_big_nohaplotig	CDS	84790616	84790714	.	-	0	Parent=FBgn0039403.1.mrna1;Target=FBgn0039403.1 1 99 +
Chr2	gffcl	locus	84790810	84791598	.	+	.	ID=RLOC_00019126;geneIDs=FBgn0039404.1.path2;transcripts=FBgn0039404.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	84790810	84791598	.	+	.	ID=FBgn0039404.1.mrna2;geneID=FBgn0039404.1.path2;Name=FBgn0039404.1;Dir=sensecoverage=100.0;identity=99.7;matches=670;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019126
Chr2	stalkie_big_nohaplotig	exon	84790810	84791019	99	+	.	Parent=FBgn0039404.1.mrna2;Target=FBgn0039404.1 1 210 +
Chr2	stalkie_big_nohaplotig	exon	84791079	84791217	100	+	.	Parent=FBgn0039404.1.mrna2;Target=FBgn0039404.1 211 349 +
Chr2	stalkie_big_nohaplotig	exon	84791276	84791598	100	+	.	Parent=FBgn0039404.1.mrna2;Target=FBgn0039404.1 350 672 +
Chr2	stalkie_big_nohaplotig	CDS	84790810	84791019	.	+	0	Parent=FBgn0039404.1.mrna2;Target=FBgn0039404.1 1 210 +
Chr2	stalkie_big_nohaplotig	CDS	84791079	84791217	.	+	0	Parent=FBgn0039404.1.mrna2;Target=FBgn0039404.1 211 349 +
Chr2	stalkie_big_nohaplotig	CDS	84791276	84791598	.	+	2	Parent=FBgn0039404.1.mrna2;Target=FBgn0039404.1 350 672 +
Chr2	gffcl	locus	84792425	84793270	.	-	.	ID=RLOC_00019127;geneIDs=FBgn0039405.1.path2,FBgn0260224.1.path1;transcripts=FBgn0260224.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84792873	84793270	.	-	.	ID=FBgn0260224.1.mrna1;geneID=FBgn0260224.1.path1;Name=FBgn0260224.1;Dir=sensecoverage=100.0;identity=99.7;matches=335;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019127
Chr2	stalkie_big_nohaplotig	exon	84792873	84793137	99	-	.	Parent=FBgn0260224.1.mrna1;Target=FBgn0260224.1 72 336 +
Chr2	stalkie_big_nohaplotig	exon	84793200	84793270	100	-	.	Parent=FBgn0260224.1.mrna1;Target=FBgn0260224.1 1 71 +
Chr2	stalkie_big_nohaplotig	CDS	84792873	84793137	.	-	1	Parent=FBgn0260224.1.mrna1;Target=FBgn0260224.1 72 336 +
Chr2	stalkie_big_nohaplotig	CDS	84793200	84793270	.	-	0	Parent=FBgn0260224.1.mrna1;Target=FBgn0260224.1 1 71 +
Chr2	gffcl	locus	84803839	84804951	.	+	.	ID=RLOC_00019128;geneIDs=FBgn0037255.path1;transcripts=FBgn0037255.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84803839	84804951	.	+	.	ID=FBgn0037255.mrna1;geneID=FBgn0037255.path1;Name=FBgn0037255;Dir=sensecoverage=100.0;identity=99.6;matches=1046;mismatches=3;indels=1;unknowns=0;locus=RLOC_00019128
Chr2	stalkie_big_nohaplotig	exon	84803839	84804177	100	+	.	Parent=FBgn0037255.mrna1;Target=FBgn0037255 1 339 +
Chr2	stalkie_big_nohaplotig	exon	84804242	84804951	99	+	.	Parent=FBgn0037255.mrna1;Target=FBgn0037255 340 1050 +
Chr2	stalkie_big_nohaplotig	CDS	84803839	84804177	.	+	0	Parent=FBgn0037255.mrna1;Target=FBgn0037255 1 339 +
Chr2	stalkie_big_nohaplotig	CDS	84804242	84804951	.	+	0	Parent=FBgn0037255.mrna1;Target=FBgn0037255 340 1050 +
Chr2	gffcl	locus	84807145	84807750	.	-	.	ID=RLOC_00019129;geneIDs=FBgn0010622.1.path1;transcripts=FBgn0010622.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84807145	84807750	.	-	.	ID=FBgn0010622.1.mrna1;geneID=FBgn0010622.1.path1;Name=FBgn0010622.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=605;mismatches=1;indels=0;unknowns=0;Target=FBgn0010622.1 606 1 .;locus=RLOC_00019129
Chr2	stalkie_big_nohaplotig	exon	84807145	84807750	99	-	.	Parent=FBgn0010622.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84807145	84807750	.	-	0	Parent=FBgn0010622.1.mrna1
Chr2	gffcl	locus	84810716	84811561	.	+	.	ID=RLOC_00019130;geneIDs=FBgn0039405.1.path1,FBgn0260224.1.path2;transcripts=FBgn0260224.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	84810716	84811113	.	+	.	ID=FBgn0260224.1.mrna2;geneID=FBgn0260224.1.path2;Name=FBgn0260224.1;Dir=sensecoverage=100.0;identity=99.7;matches=335;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019130
Chr2	stalkie_big_nohaplotig	exon	84810716	84810786	100	+	.	Parent=FBgn0260224.1.mrna2;Target=FBgn0260224.1 1 71 +
Chr2	stalkie_big_nohaplotig	exon	84810849	84811113	99	+	.	Parent=FBgn0260224.1.mrna2;Target=FBgn0260224.1 72 336 +
Chr2	stalkie_big_nohaplotig	CDS	84810716	84810786	.	+	0	Parent=FBgn0260224.1.mrna2;Target=FBgn0260224.1 1 71 +
Chr2	stalkie_big_nohaplotig	CDS	84810849	84811113	.	+	1	Parent=FBgn0260224.1.mrna2;Target=FBgn0260224.1 72 336 +
Chr2	gffcl	locus	84812383	84813171	.	-	.	ID=RLOC_00019131;geneIDs=FBgn0039404.1.path1;transcripts=FBgn0039404.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84812383	84813171	.	-	.	ID=FBgn0039404.1.mrna1;geneID=FBgn0039404.1.path1;Name=FBgn0039404.1;Dir=sensecoverage=100.0;identity=99.9;matches=671;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019131
Chr2	stalkie_big_nohaplotig	exon	84812383	84812705	100	-	.	Parent=FBgn0039404.1.mrna1;Target=FBgn0039404.1 350 672 +
Chr2	stalkie_big_nohaplotig	exon	84812764	84812902	100	-	.	Parent=FBgn0039404.1.mrna1;Target=FBgn0039404.1 211 349 +
Chr2	stalkie_big_nohaplotig	exon	84812962	84813171	99	-	.	Parent=FBgn0039404.1.mrna1;Target=FBgn0039404.1 1 210 +
Chr2	stalkie_big_nohaplotig	CDS	84812383	84812705	.	-	2	Parent=FBgn0039404.1.mrna1;Target=FBgn0039404.1 350 672 +
Chr2	stalkie_big_nohaplotig	CDS	84812764	84812902	.	-	0	Parent=FBgn0039404.1.mrna1;Target=FBgn0039404.1 211 349 +
Chr2	stalkie_big_nohaplotig	CDS	84812962	84813171	.	-	0	Parent=FBgn0039404.1.mrna1;Target=FBgn0039404.1 1 210 +
Chr2	gffcl	locus	84813267	84814066	.	+	.	ID=RLOC_00019132;geneIDs=FBgn0039403.1.path2;transcripts=FBgn0039403.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	84813267	84814066	.	+	.	ID=FBgn0039403.1.mrna2;geneID=FBgn0039403.1.path2;Name=FBgn0039403.1;Dir=sensecoverage=100.0;identity=99.3;matches=667;mismatches=5;indels=0;unknowns=0;locus=RLOC_00019132
Chr2	stalkie_big_nohaplotig	exon	84813267	84813365	98	+	.	Parent=FBgn0039403.1.mrna2;Target=FBgn0039403.1 1 99 +
Chr2	stalkie_big_nohaplotig	exon	84813427	84813880	99	+	.	Parent=FBgn0039403.1.mrna2;Target=FBgn0039403.1 100 553 +
Chr2	stalkie_big_nohaplotig	exon	84813948	84814066	100	+	.	Parent=FBgn0039403.1.mrna2;Target=FBgn0039403.1 554 672 +
Chr2	stalkie_big_nohaplotig	CDS	84813267	84813365	.	+	0	Parent=FBgn0039403.1.mrna2;Target=FBgn0039403.1 1 99 +
Chr2	stalkie_big_nohaplotig	CDS	84813427	84813880	.	+	0	Parent=FBgn0039403.1.mrna2;Target=FBgn0039403.1 100 553 +
Chr2	stalkie_big_nohaplotig	CDS	84813948	84814066	.	+	2	Parent=FBgn0039403.1.mrna2;Target=FBgn0039403.1 554 672 +
Chr2	gffcl	locus	84824756	84841273	.	+	.	ID=RLOC_00019133;geneIDs=FBgn0000039.1.path1;transcripts=FBgn0000039.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84824756	84841273	.	+	.	ID=FBgn0000039.1.mrna1;geneID=FBgn0000039.1.path1;Name=FBgn0000039.1;Dir=sensecoverage=100.0;identity=99.7;matches=1693;mismatches=5;indels=0;unknowns=0;locus=RLOC_00019133
Chr2	stalkie_big_nohaplotig	exon	84824756	84824983	99	+	.	Parent=FBgn0000039.1.mrna1;Target=FBgn0000039.1 1 228 +
Chr2	stalkie_big_nohaplotig	exon	84829854	84830008	100	+	.	Parent=FBgn0000039.1.mrna1;Target=FBgn0000039.1 229 383 +
Chr2	stalkie_big_nohaplotig	exon	84830086	84830266	99	+	.	Parent=FBgn0000039.1.mrna1;Target=FBgn0000039.1 384 564 +
Chr2	stalkie_big_nohaplotig	exon	84830892	84831051	100	+	.	Parent=FBgn0000039.1.mrna1;Target=FBgn0000039.1 565 724 +
Chr2	stalkie_big_nohaplotig	exon	84836916	84837495	99	+	.	Parent=FBgn0000039.1.mrna1;Target=FBgn0000039.1 725 1304 +
Chr2	stalkie_big_nohaplotig	exon	84837669	84837870	100	+	.	Parent=FBgn0000039.1.mrna1;Target=FBgn0000039.1 1305 1506 +
Chr2	stalkie_big_nohaplotig	exon	84841082	84841273	98	+	.	Parent=FBgn0000039.1.mrna1;Target=FBgn0000039.1 1507 1698 +
Chr2	stalkie_big_nohaplotig	CDS	84824756	84824983	.	+	0	Parent=FBgn0000039.1.mrna1;Target=FBgn0000039.1 1 228 +
Chr2	stalkie_big_nohaplotig	CDS	84829854	84830008	.	+	0	Parent=FBgn0000039.1.mrna1;Target=FBgn0000039.1 229 383 +
Chr2	stalkie_big_nohaplotig	CDS	84830086	84830266	.	+	1	Parent=FBgn0000039.1.mrna1;Target=FBgn0000039.1 384 564 +
Chr2	stalkie_big_nohaplotig	CDS	84830892	84831051	.	+	0	Parent=FBgn0000039.1.mrna1;Target=FBgn0000039.1 565 724 +
Chr2	stalkie_big_nohaplotig	CDS	84836916	84837495	.	+	2	Parent=FBgn0000039.1.mrna1;Target=FBgn0000039.1 725 1304 +
Chr2	stalkie_big_nohaplotig	CDS	84837669	84837870	.	+	1	Parent=FBgn0000039.1.mrna1;Target=FBgn0000039.1 1305 1506 +
Chr2	stalkie_big_nohaplotig	CDS	84841082	84841273	.	+	0	Parent=FBgn0000039.1.mrna1;Target=FBgn0000039.1 1507 1698 +
Chr2	gffcl	locus	84863546	84864038	.	-	.	ID=RLOC_00019134;geneIDs=FBgn0038196.1.path1;transcripts=FBgn0038196.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84863546	84864038	.	-	.	ID=FBgn0038196.1.mrna1;geneID=FBgn0038196.1.path1;Name=FBgn0038196.1;Dir=sensecoverage=100.0;identity=100.0;matches=363;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019134
Chr2	stalkie_big_nohaplotig	exon	84863546	84863641	100	-	.	Parent=FBgn0038196.1.mrna1;Target=FBgn0038196.1 268 363 +
Chr2	stalkie_big_nohaplotig	exon	84863700	84863807	100	-	.	Parent=FBgn0038196.1.mrna1;Target=FBgn0038196.1 160 267 +
Chr2	stalkie_big_nohaplotig	exon	84863880	84864038	100	-	.	Parent=FBgn0038196.1.mrna1;Target=FBgn0038196.1 1 159 +
Chr2	stalkie_big_nohaplotig	CDS	84863546	84863641	.	-	0	Parent=FBgn0038196.1.mrna1;Target=FBgn0038196.1 268 363 +
Chr2	stalkie_big_nohaplotig	CDS	84863700	84863807	.	-	0	Parent=FBgn0038196.1.mrna1;Target=FBgn0038196.1 160 267 +
Chr2	stalkie_big_nohaplotig	CDS	84863880	84864038	.	-	0	Parent=FBgn0038196.1.mrna1;Target=FBgn0038196.1 1 159 +
Chr2	gffcl	locus	84899201	84900895	.	+	.	ID=RLOC_00019135;geneIDs=FBgn0040373.4.path1;transcripts=FBgn0040373.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84899201	84900895	.	+	.	ID=FBgn0040373.4.mrna1;geneID=FBgn0040373.4.path1;Name=FBgn0040373.4;Dir=sensecoverage=100.0;identity=99.7;matches=1101;mismatches=3;indels=0;unknowns=0;locus=RLOC_00019135
Chr2	stalkie_big_nohaplotig	exon	84899201	84899441	100	+	.	Parent=FBgn0040373.4.mrna1;Target=FBgn0040373.4 1 241 +
Chr2	stalkie_big_nohaplotig	exon	84900033	84900895	99	+	.	Parent=FBgn0040373.4.mrna1;Target=FBgn0040373.4 242 1104 +
Chr2	stalkie_big_nohaplotig	CDS	84899201	84899441	.	+	0	Parent=FBgn0040373.4.mrna1;Target=FBgn0040373.4 1 241 +
Chr2	stalkie_big_nohaplotig	CDS	84900033	84900895	.	+	2	Parent=FBgn0040373.4.mrna1;Target=FBgn0040373.4 242 1104 +
Chr2	gffcl	locus	84915250	84928304	.	+	.	ID=RLOC_00019136;geneIDs=FBgn0086910.1.path1;transcripts=FBgn0086910.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84915250	84928304	.	+	.	ID=FBgn0086910.1.mrna1;geneID=FBgn0086910.1.path1;Name=FBgn0086910.1;Dir=sensecoverage=100.0;identity=100.0;matches=1395;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019136
Chr2	stalkie_big_nohaplotig	exon	84915250	84915466	100	+	.	Parent=FBgn0086910.1.mrna1;Target=FBgn0086910.1 1 217 +
Chr2	stalkie_big_nohaplotig	exon	84923322	84923459	100	+	.	Parent=FBgn0086910.1.mrna1;Target=FBgn0086910.1 218 355 +
Chr2	stalkie_big_nohaplotig	exon	84925853	84926652	100	+	.	Parent=FBgn0086910.1.mrna1;Target=FBgn0086910.1 356 1155 +
Chr2	stalkie_big_nohaplotig	exon	84926774	84926870	100	+	.	Parent=FBgn0086910.1.mrna1;Target=FBgn0086910.1 1156 1252 +
Chr2	stalkie_big_nohaplotig	exon	84928162	84928304	100	+	.	Parent=FBgn0086910.1.mrna1;Target=FBgn0086910.1 1253 1395 +
Chr2	stalkie_big_nohaplotig	CDS	84915250	84915466	.	+	0	Parent=FBgn0086910.1.mrna1;Target=FBgn0086910.1 1 217 +
Chr2	stalkie_big_nohaplotig	CDS	84923322	84923459	.	+	2	Parent=FBgn0086910.1.mrna1;Target=FBgn0086910.1 218 355 +
Chr2	stalkie_big_nohaplotig	CDS	84925853	84926652	.	+	2	Parent=FBgn0086910.1.mrna1;Target=FBgn0086910.1 356 1155 +
Chr2	stalkie_big_nohaplotig	CDS	84926774	84926870	.	+	0	Parent=FBgn0086910.1.mrna1;Target=FBgn0086910.1 1156 1252 +
Chr2	stalkie_big_nohaplotig	CDS	84928162	84928304	.	+	2	Parent=FBgn0086910.1.mrna1;Target=FBgn0086910.1 1253 1395 +
Chr2	gffcl	locus	84931694	84932168	.	-	.	ID=RLOC_00019137;geneIDs=comp121646_c0_seq1.path1;transcripts=comp121646_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84931694	84932168	.	-	.	ID=comp121646_c0_seq1.mrna1;geneID=comp121646_c0_seq1.path1;Name=comp121646_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=474;mismatches=1;indels=1;unknowns=0;Target=comp121646_c0_seq1 476 1 .;CDS_Target=comp121646_c0_seq1 358 281 .;locus=RLOC_00019137
Chr2	stalkie_big_nohaplotig	exon	84931694	84932168	99	-	.	Parent=comp121646_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84931812	84931889	.	-	0	Parent=comp121646_c0_seq1.mrna1
Chr2	gffcl	locus	84933077	84933416	.	+	.	ID=RLOC_00019138;geneIDs=comp135352_c0_seq1.path1;transcripts=comp135352_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84933077	84933416	.	+	.	ID=comp135352_c0_seq1.mrna1;geneID=comp135352_c0_seq1.path1;Name=comp135352_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=340;mismatches=0;indels=0;unknowns=0;Target=comp135352_c0_seq1 340 1 .;CDS_Target=comp135352_c0_seq1 221 117 .;locus=RLOC_00019138
Chr2	stalkie_big_nohaplotig	exon	84933077	84933416	100	+	.	Parent=comp135352_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84933193	84933297	.	+	0	Parent=comp135352_c0_seq1.mrna1
Chr2	gffcl	locus	84936262	84936899	.	-	.	ID=RLOC_00019139;geneIDs=comp149936_c1_seq1.path1;transcripts=comp149936_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84936262	84936899	.	-	.	ID=comp149936_c1_seq1.mrna1;geneID=comp149936_c1_seq1.path1;Name=comp149936_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=637;mismatches=1;indels=0;unknowns=0;Target=comp149936_c1_seq1 638 1 .;CDS_Target=comp149936_c1_seq1 270 94 .;locus=RLOC_00019139
Chr2	stalkie_big_nohaplotig	exon	84936262	84936899	99	-	.	Parent=comp149936_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84936630	84936806	.	-	0	Parent=comp149936_c1_seq1.mrna1
Chr2	gffcl	locus	84936911	84938117	.	-	.	ID=RLOC_00019140;geneIDs=comp131145_c0_seq1.path1;transcripts=comp131145_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84936911	84938117	.	-	.	ID=comp131145_c0_seq1.mrna1;geneID=comp131145_c0_seq1.path1;Name=comp131145_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1204;mismatches=1;indels=2;unknowns=0;Target=comp131145_c0_seq1 1205 1 .;CDS_Target=comp131145_c0_seq1 394 347 .;locus=RLOC_00019140
Chr2	stalkie_big_nohaplotig	exon	84936911	84938117	99	-	.	Parent=comp131145_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84937722	84937771	.	-	0	Parent=comp131145_c0_seq1.mrna1
Chr2	gffcl	locus	84940944	84941645	.	+	.	ID=RLOC_00019141;geneIDs=comp117833_c0_seq1.path1;transcripts=comp117833_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84940944	84941645	.	+	.	ID=comp117833_c0_seq1.mrna1;geneID=comp117833_c0_seq1.path1;Name=comp117833_c0_seq1;Dir=sensecoverage=99.8;identity=100.0;matches=627;mismatches=0;indels=0;unknowns=0;Target=comp117833_c0_seq1 243 356 +;locus=RLOC_00019141
Chr2	stalkie_big_nohaplotig	exon	84940944	84940980	100	+	.	Parent=comp117833_c0_seq1.mrna1;Target=comp117833_c0_seq1 1 37 +
Chr2	stalkie_big_nohaplotig	exon	84941056	84941645	100	+	.	Parent=comp117833_c0_seq1.mrna1;Target=comp117833_c0_seq1 38 627 +
Chr2	stalkie_big_nohaplotig	CDS	84941261	84941374	.	+	0	Parent=comp117833_c0_seq1.mrna1
Chr2	gffcl	locus	84942802	84952447	.	+	.	ID=RLOC_00019142;geneIDs=FBgn0050344.2.path1;transcripts=FBgn0050344.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84942802	84952447	.	+	.	ID=FBgn0050344.2.mrna1;geneID=FBgn0050344.2.path1;Name=FBgn0050344.2;Dir=sensecoverage=100.0;identity=100.0;matches=1536;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019142
Chr2	stalkie_big_nohaplotig	exon	84942802	84943024	100	+	.	Parent=FBgn0050344.2.mrna1;Target=FBgn0050344.2 1 223 +
Chr2	stalkie_big_nohaplotig	exon	84943092	84943207	100	+	.	Parent=FBgn0050344.2.mrna1;Target=FBgn0050344.2 224 339 +
Chr2	stalkie_big_nohaplotig	exon	84949887	84950037	100	+	.	Parent=FBgn0050344.2.mrna1;Target=FBgn0050344.2 340 490 +
Chr2	stalkie_big_nohaplotig	exon	84950849	84951032	100	+	.	Parent=FBgn0050344.2.mrna1;Target=FBgn0050344.2 491 674 +
Chr2	stalkie_big_nohaplotig	exon	84951229	84951409	100	+	.	Parent=FBgn0050344.2.mrna1;Target=FBgn0050344.2 675 855 +
Chr2	stalkie_big_nohaplotig	exon	84951474	84951609	100	+	.	Parent=FBgn0050344.2.mrna1;Target=FBgn0050344.2 856 991 +
Chr2	stalkie_big_nohaplotig	exon	84951683	84951819	100	+	.	Parent=FBgn0050344.2.mrna1;Target=FBgn0050344.2 992 1128 +
Chr2	stalkie_big_nohaplotig	exon	84951880	84952069	100	+	.	Parent=FBgn0050344.2.mrna1;Target=FBgn0050344.2 1129 1318 +
Chr2	stalkie_big_nohaplotig	exon	84952148	84952304	100	+	.	Parent=FBgn0050344.2.mrna1;Target=FBgn0050344.2 1319 1475 +
Chr2	stalkie_big_nohaplotig	exon	84952387	84952447	100	+	.	Parent=FBgn0050344.2.mrna1;Target=FBgn0050344.2 1476 1536 +
Chr2	stalkie_big_nohaplotig	CDS	84942802	84943024	.	+	0	Parent=FBgn0050344.2.mrna1;Target=FBgn0050344.2 1 223 +
Chr2	stalkie_big_nohaplotig	CDS	84943092	84943207	.	+	2	Parent=FBgn0050344.2.mrna1;Target=FBgn0050344.2 224 339 +
Chr2	stalkie_big_nohaplotig	CDS	84949887	84950037	.	+	0	Parent=FBgn0050344.2.mrna1;Target=FBgn0050344.2 340 490 +
Chr2	stalkie_big_nohaplotig	CDS	84950849	84951032	.	+	2	Parent=FBgn0050344.2.mrna1;Target=FBgn0050344.2 491 674 +
Chr2	stalkie_big_nohaplotig	CDS	84951229	84951409	.	+	1	Parent=FBgn0050344.2.mrna1;Target=FBgn0050344.2 675 855 +
Chr2	stalkie_big_nohaplotig	CDS	84951474	84951609	.	+	0	Parent=FBgn0050344.2.mrna1;Target=FBgn0050344.2 856 991 +
Chr2	stalkie_big_nohaplotig	CDS	84951683	84951819	.	+	2	Parent=FBgn0050344.2.mrna1;Target=FBgn0050344.2 992 1128 +
Chr2	stalkie_big_nohaplotig	CDS	84951880	84952069	.	+	0	Parent=FBgn0050344.2.mrna1;Target=FBgn0050344.2 1129 1318 +
Chr2	stalkie_big_nohaplotig	CDS	84952148	84952304	.	+	2	Parent=FBgn0050344.2.mrna1;Target=FBgn0050344.2 1319 1475 +
Chr2	stalkie_big_nohaplotig	CDS	84952387	84952447	.	+	1	Parent=FBgn0050344.2.mrna1;Target=FBgn0050344.2 1476 1536 +
Chr2	gffcl	locus	84953842	84954416	.	+	.	ID=RLOC_00019143;geneIDs=comp143654_c0_seq1.path1;transcripts=comp143654_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84953842	84954416	.	+	.	ID=comp143654_c0_seq1.mrna1;geneID=comp143654_c0_seq1.path1;Name=comp143654_c0_seq1;Dir=indeterminatecoverage=89.4;identity=97.6;matches=563;mismatches=10;indels=4;unknowns=0;Target=comp143654_c0_seq1 575 1 .;CDS_Target=comp143654_c0_seq1 558 493 .;locus=RLOC_00019143
Chr2	stalkie_big_nohaplotig	exon	84953842	84954416	97	+	.	Parent=comp143654_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	84954334	84954399	.	+	0	Parent=comp143654_c0_seq1.mrna1
Chr2	gffcl	locus	84955575	84958873	.	+	.	ID=RLOC_00019144;geneIDs=FBgn0003257.1.path1;transcripts=FBgn0003257.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	84955575	84958873	.	+	.	ID=FBgn0003257.1.mrna1;geneID=FBgn0003257.1.path1;Name=FBgn0003257.1;Dir=sensecoverage=100.0;identity=100.0;matches=1479;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019144
Chr2	stalkie_big_nohaplotig	exon	84955575	84955739	100	+	.	Parent=FBgn0003257.1.mrna1;Target=FBgn0003257.1 1 165 +
Chr2	stalkie_big_nohaplotig	exon	84955802	84956309	100	+	.	Parent=FBgn0003257.1.mrna1;Target=FBgn0003257.1 166 673 +
Chr2	stalkie_big_nohaplotig	exon	84958068	84958873	100	+	.	Parent=FBgn0003257.1.mrna1;Target=FBgn0003257.1 674 1479 +
Chr2	stalkie_big_nohaplotig	CDS	84955575	84955739	.	+	0	Parent=FBgn0003257.1.mrna1;Target=FBgn0003257.1 1 165 +
Chr2	stalkie_big_nohaplotig	CDS	84955802	84956309	.	+	0	Parent=FBgn0003257.1.mrna1;Target=FBgn0003257.1 166 673 +
Chr2	stalkie_big_nohaplotig	CDS	84958068	84958873	.	+	2	Parent=FBgn0003257.1.mrna1;Target=FBgn0003257.1 674 1479 +
Chr2	gffcl	locus	84962044	84962428	.	-	.	ID=RLOC_00019145;geneIDs=comp100408_c0_seq1.path2;transcripts=comp100408_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	84962044	84962428	.	-	.	ID=comp100408_c0_seq1.mrna2;geneID=comp100408_c0_seq1.path2;Name=comp100408_c0_seq1;Dir=indeterminatecoverage=91.2;identity=98.4;matches=379;mismatches=6;indels=0;unknowns=0;Target=comp100408_c0_seq1 385 1 .;CDS_Target=comp100408_c0_seq1 87 1 .;locus=RLOC_00019145
Chr2	stalkie_big_nohaplotig	exon	84962044	84962428	98	-	.	Parent=comp100408_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	84962342	84962428	.	-	0	Parent=comp100408_c0_seq1.mrna2
Chr2	gffcl	locus	84965795	84966750	.	+	.	ID=RLOC_00019146;geneIDs=FBgn0051472.1.path2;transcripts=FBgn0051472.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	84965795	84966750	.	+	.	ID=FBgn0051472.1.mrna2;geneID=FBgn0051472.1.path2;Name=FBgn0051472.1;Dir=sensecoverage=100.0;identity=99.1;matches=743;mismatches=7;indels=0;unknowns=0;locus=RLOC_00019146
Chr2	stalkie_big_nohaplotig	exon	84965795	84965867	98	+	.	Parent=FBgn0051472.1.mrna2;Target=FBgn0051472.1 1 73 +
Chr2	stalkie_big_nohaplotig	exon	84965926	84966082	98	+	.	Parent=FBgn0051472.1.mrna2;Target=FBgn0051472.1 74 230 +
Chr2	stalkie_big_nohaplotig	exon	84966167	84966623	99	+	.	Parent=FBgn0051472.1.mrna2;Target=FBgn0051472.1 231 687 +
Chr2	stalkie_big_nohaplotig	exon	84966688	84966750	98	+	.	Parent=FBgn0051472.1.mrna2;Target=FBgn0051472.1 688 750 +
Chr2	stalkie_big_nohaplotig	CDS	84965795	84965867	.	+	0	Parent=FBgn0051472.1.mrna2;Target=FBgn0051472.1 1 73 +
Chr2	stalkie_big_nohaplotig	CDS	84965926	84966082	.	+	2	Parent=FBgn0051472.1.mrna2;Target=FBgn0051472.1 74 230 +
Chr2	stalkie_big_nohaplotig	CDS	84966167	84966623	.	+	1	Parent=FBgn0051472.1.mrna2;Target=FBgn0051472.1 231 687 +
Chr2	stalkie_big_nohaplotig	CDS	84966688	84966750	.	+	0	Parent=FBgn0051472.1.mrna2;Target=FBgn0051472.1 688 750 +
Chr2	gffcl	locus	84986118	84988619	.	+	.	ID=RLOC_00019147;geneIDs=FBgn0002723.1.path2;transcripts=FBgn0002723.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	84986118	84988619	.	+	.	ID=FBgn0002723.1.mrna2;geneID=FBgn0002723.1.path2;Name=FBgn0002723.1;Dir=sensecoverage=100.0;identity=99.5;matches=2272;mismatches=11;indels=0;unknowns=0;locus=RLOC_00019147
Chr2	stalkie_big_nohaplotig	exon	84986118	84987182	99	+	.	Parent=FBgn0002723.1.mrna2;Target=FBgn0002723.1 1 1065 +
Chr2	stalkie_big_nohaplotig	exon	84987402	84988619	99	+	.	Parent=FBgn0002723.1.mrna2;Target=FBgn0002723.1 1066 2283 +
Chr2	stalkie_big_nohaplotig	CDS	84986118	84987182	.	+	0	Parent=FBgn0002723.1.mrna2;Target=FBgn0002723.1 1 1065 +
Chr2	stalkie_big_nohaplotig	CDS	84987402	84988619	.	+	0	Parent=FBgn0002723.1.mrna2;Target=FBgn0002723.1 1066 2283 +
Chr2	gffcl	locus	85063288	85063880	.	+	.	ID=RLOC_00019148;geneIDs=Dp_FBgn0249362.path9;transcripts=Dp_FBgn0249362.mrna9
Chr2	stalkie_big_nohaplotig	mRNA	85063288	85063880	.	+	.	ID=Dp_FBgn0249362.mrna9;geneID=Dp_FBgn0249362.path9;Name=Dp_FBgn0249362;Dir=indeterminatecoverage=100.0;identity=99.3;matches=590;mismatches=3;indels=1;unknowns=0;Target=Dp_FBgn0249362 594 1 .;locus=RLOC_00019148
Chr2	stalkie_big_nohaplotig	exon	85063288	85063880	99	+	.	Parent=Dp_FBgn0249362.mrna9
Chr2	stalkie_big_nohaplotig	CDS	85063288	85063880	.	+	0	Parent=Dp_FBgn0249362.mrna9
Chr2	gffcl	locus	85155170	85156414	.	.	.	ID=RLOC_00019149;geneIDs=comp119001_c0_seq1.path1,comp162860_c0_seq1.path2;transcripts=comp162860_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	85155397	85156414	.	+	.	ID=comp162860_c0_seq1.mrna2;geneID=comp162860_c0_seq1.path2;Name=comp162860_c0_seq1;Dir=indeterminatecoverage=89.3;identity=91.5;matches=938;mismatches=52;indels=35;unknowns=0;Target=comp162860_c0_seq1 1116 120 .;CDS_Target=comp162860_c0_seq1 181 120 .;locus=RLOC_00019149
Chr2	stalkie_big_nohaplotig	exon	85155397	85156414	91	+	.	Parent=comp162860_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	85155397	85155458	.	+	1	Parent=comp162860_c0_seq1.mrna2
Chr2	gffcl	locus	85318129	87214475	.	+	.	ID=RLOC_00019150;geneIDs=FBgn0037540.1.path2,comp158260_c0_seq1.path1;transcripts=comp158260_c0_seq1.mrna1,FBgn0037540.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	85318129	87214475	.	+	.	ID=comp158260_c0_seq1.mrna1;geneID=comp158260_c0_seq1.path1;Name=comp158260_c0_seq1;Dir=indeterminatecoverage=73.7;identity=88.4;matches=1192;mismatches=46;indels=111;unknowns=0;Target=comp158260_c0_seq1 385 230 .;locus=RLOC_00019150
Chr2	stalkie_big_nohaplotig	exon	85318129	85319257	89	+	.	Parent=comp158260_c0_seq1.mrna1;Target=comp158260_c0_seq1 1229 5 .
Chr2	stalkie_big_nohaplotig	exon	87143235	87143240	100	+	.	Parent=comp158260_c0_seq1.mrna1;Target=comp158260_c0_seq1 1235 1230 .
Chr2	stalkie_big_nohaplotig	exon	87150770	87150773	100	+	.	Parent=comp158260_c0_seq1.mrna1;Target=comp158260_c0_seq1 1239 1236 .
Chr2	stalkie_big_nohaplotig	exon	87153780	87153787	100	+	.	Parent=comp158260_c0_seq1.mrna1;Target=comp158260_c0_seq1 1247 1240 .
Chr2	stalkie_big_nohaplotig	exon	87160324	87160330	100	+	.	Parent=comp158260_c0_seq1.mrna1;Target=comp158260_c0_seq1 1254 1248 .
Chr2	stalkie_big_nohaplotig	exon	87168366	87168371	100	+	.	Parent=comp158260_c0_seq1.mrna1;Target=comp158260_c0_seq1 1260 1255 .
Chr2	stalkie_big_nohaplotig	exon	87178369	87178389	66	+	.	Parent=comp158260_c0_seq1.mrna1;Target=comp158260_c0_seq1 1277 1261 .
Chr2	stalkie_big_nohaplotig	exon	87190812	87190832	47	+	.	Parent=comp158260_c0_seq1.mrna1;Target=comp158260_c0_seq1 1290 1278 .
Chr2	stalkie_big_nohaplotig	exon	87201317	87201325	100	+	.	Parent=comp158260_c0_seq1.mrna1;Target=comp158260_c0_seq1 1299 1291 .
Chr2	stalkie_big_nohaplotig	exon	87203356	87203359	100	+	.	Parent=comp158260_c0_seq1.mrna1;Target=comp158260_c0_seq1 1303 1300 .
Chr2	stalkie_big_nohaplotig	exon	87210252	87210254	100	+	.	Parent=comp158260_c0_seq1.mrna1;Target=comp158260_c0_seq1 1306 1304 .
Chr2	stalkie_big_nohaplotig	exon	87214444	87214475	82	+	.	Parent=comp158260_c0_seq1.mrna1;Target=comp158260_c0_seq1 1341 1307 .
Chr2	stalkie_big_nohaplotig	CDS	85318354	85318478	.	+	0	Parent=comp158260_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87167276	87169197	.	+	.	ID=FBgn0037540.1.mrna2;geneID=FBgn0037540.1.path2;Name=FBgn0037540.1;Dir=sensecoverage=100.0;identity=94.9;matches=1728;mismatches=84;indels=9;unknowns=0;locus=RLOC_00019150
Chr2	stalkie_big_nohaplotig	exon	87167276	87167866	89	+	.	Parent=FBgn0037540.1.mrna2;Target=FBgn0037540.1 1 600 +
Chr2	stalkie_big_nohaplotig	exon	87167925	87168471	96	+	.	Parent=FBgn0037540.1.mrna2;Target=FBgn0037540.1 601 1147 +
Chr2	stalkie_big_nohaplotig	exon	87168524	87169197	98	+	.	Parent=FBgn0037540.1.mrna2;Target=FBgn0037540.1 1148 1821 +
Chr2	stalkie_big_nohaplotig	CDS	87167276	87167866	.	+	0	Parent=FBgn0037540.1.mrna2;Target=FBgn0037540.1 1 600 +
Chr2	stalkie_big_nohaplotig	CDS	87167925	87168471	.	+	0	Parent=FBgn0037540.1.mrna2;Target=FBgn0037540.1 601 1147 +
Chr2	stalkie_big_nohaplotig	CDS	87168524	87169197	.	+	2	Parent=FBgn0037540.1.mrna2;Target=FBgn0037540.1 1148 1821 +
Chr2	gffcl	locus	85325015	85325791	.	-	.	ID=RLOC_00019151;geneIDs=comp154918_c1_seq1.path1;transcripts=comp154918_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85325015	85325791	.	-	.	ID=comp154918_c1_seq1.mrna1;geneID=comp154918_c1_seq1.path1;Name=comp154918_c1_seq1;Dir=indeterminatecoverage=99.4;identity=98.8;matches=768;mismatches=9;indels=0;unknowns=0;Target=comp154918_c1_seq1 777 1 .;CDS_Target=comp154918_c1_seq1 520 461 .;locus=RLOC_00019151
Chr2	stalkie_big_nohaplotig	exon	85325015	85325791	98	-	.	Parent=comp154918_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85325272	85325331	.	-	0	Parent=comp154918_c1_seq1.mrna1
Chr2	gffcl	locus	85326303	85326886	.	-	.	ID=RLOC_00019152;geneIDs=comp150543_c0_seq1.path1;transcripts=comp150543_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85326303	85326886	.	-	.	ID=comp150543_c0_seq1.mrna1;geneID=comp150543_c0_seq1.path1;Name=comp150543_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=577;mismatches=6;indels=1;unknowns=0;Target=comp150543_c0_seq1 583 1 .;CDS_Target=comp150543_c0_seq1 45 19 .;locus=RLOC_00019152
Chr2	stalkie_big_nohaplotig	exon	85326303	85326886	98	-	.	Parent=comp150543_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85326841	85326868	.	-	0	Parent=comp150543_c0_seq1.mrna1
Chr2	gffcl	locus	85363385	85366213	.	-	.	ID=RLOC_00019153;geneIDs=FBgn0039197.2.path1;transcripts=FBgn0039197.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85363385	85366213	.	-	.	ID=FBgn0039197.2.mrna1;geneID=FBgn0039197.2.path1;Name=FBgn0039197.2;Dir=sensecoverage=82.4;identity=99.4;matches=634;mismatches=4;indels=0;unknowns=0;locus=RLOC_00019153
Chr2	stalkie_big_nohaplotig	exon	85363385	85363773	99	-	.	Parent=FBgn0039197.2.mrna1;Target=FBgn0039197.2 250 638 +
Chr2	stalkie_big_nohaplotig	exon	85365965	85366213	98	-	.	Parent=FBgn0039197.2.mrna1;Target=FBgn0039197.2 1 249 +
Chr2	stalkie_big_nohaplotig	CDS	85363385	85363773	.	-	0	Parent=FBgn0039197.2.mrna1;Target=FBgn0039197.2 250 638 +
Chr2	stalkie_big_nohaplotig	CDS	85365965	85366213	.	-	0	Parent=FBgn0039197.2.mrna1;Target=FBgn0039197.2 1 249 +
Chr2	gffcl	locus	85386390	85387308	.	+	.	ID=RLOC_00019155;geneIDs=comp149641_c0_seq1.path1,comp156746_c1_seq1.path1;transcripts=comp149641_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85386674	85387308	.	+	.	ID=comp149641_c0_seq1.mrna1;geneID=comp149641_c0_seq1.path1;Name=comp149641_c0_seq1;Dir=indeterminatecoverage=98.6;identity=98.9;matches=628;mismatches=2;indels=5;unknowns=0;Target=comp149641_c0_seq1 630 1 .;CDS_Target=comp149641_c0_seq1 475 374 .;locus=RLOC_00019155
Chr2	stalkie_big_nohaplotig	exon	85386674	85387308	98	+	.	Parent=comp149641_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85387052	85387153	.	+	0	Parent=comp149641_c0_seq1.mrna1
Chr2	gffcl	locus	85387911	85388314	.	+	.	ID=RLOC_00019156;geneIDs=comp148061_c0_seq1.path1;transcripts=comp148061_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85387911	85388314	.	+	.	ID=comp148061_c0_seq1.mrna1;geneID=comp148061_c0_seq1.path1;Name=comp148061_c0_seq1;Dir=indeterminatecoverage=97.1;identity=96.6;matches=396;mismatches=2;indels=12;unknowns=0;Target=comp148061_c0_seq1 404 1 .;CDS_Target=comp148061_c0_seq1 139 44 .;locus=RLOC_00019156
Chr2	stalkie_big_nohaplotig	exon	85387911	85388314	96	+	.	Parent=comp148061_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85387954	85388049	.	+	0	Parent=comp148061_c0_seq1.mrna1
Chr2	gffcl	locus	85388358	85389185	.	-	.	ID=RLOC_00019157;geneIDs=comp158320_c0_seq1.path1;transcripts=comp158320_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85388358	85389185	.	-	.	ID=comp158320_c0_seq1.mrna1;geneID=comp158320_c0_seq1.path1;Name=comp158320_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=805;mismatches=15;indels=11;unknowns=0;Target=comp158320_c0_seq1 823 1 .;CDS_Target=comp158320_c0_seq1 442 269 .;locus=RLOC_00019157
Chr2	stalkie_big_nohaplotig	exon	85388358	85389185	96	-	.	Parent=comp158320_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85388737	85388910	.	-	0	Parent=comp158320_c0_seq1.mrna1
Chr2	gffcl	locus	85389958	85390598	.	+	.	ID=RLOC_00019158;geneIDs=comp153474_c0_seq1.path1;transcripts=comp153474_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85389958	85390598	.	+	.	ID=comp153474_c0_seq1.mrna1;geneID=comp153474_c0_seq1.path1;Name=comp153474_c0_seq1;Dir=indeterminatecoverage=87.9;identity=98.0;matches=628;mismatches=13;indels=0;unknowns=0;Target=comp153474_c0_seq1 729 89 .;CDS_Target=comp153474_c0_seq1 220 89 .;locus=RLOC_00019158
Chr2	stalkie_big_nohaplotig	exon	85389958	85390598	97	+	.	Parent=comp153474_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85389958	85390089	.	+	0	Parent=comp153474_c0_seq1.mrna1
Chr2	gffcl	locus	85390973	85391296	.	+	.	ID=RLOC_00019159;geneIDs=comp143607_c0_seq1.path1;transcripts=comp143607_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85390973	85391296	.	+	.	ID=comp143607_c0_seq1.mrna1;geneID=comp143607_c0_seq1.path1;Name=comp143607_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=320;mismatches=4;indels=0;unknowns=0;Target=comp143607_c0_seq1 324 1 .;CDS_Target=comp143607_c0_seq1 25 20 .;locus=RLOC_00019159
Chr2	stalkie_big_nohaplotig	exon	85390973	85391296	98	+	.	Parent=comp143607_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85390992	85390997	.	+	0	Parent=comp143607_c0_seq1.mrna1
Chr2	gffcl	locus	85391466	85391678	.	+	.	ID=RLOC_00019160;geneIDs=comp700408_c0_seq1.path1;transcripts=comp700408_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85391466	85391678	.	+	.	ID=comp700408_c0_seq1.mrna1;geneID=comp700408_c0_seq1.path1;Name=comp700408_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=213;mismatches=0;indels=0;unknowns=0;Target=comp700408_c0_seq1 213 1 .;CDS_Target=comp700408_c0_seq1 90 1 .;locus=RLOC_00019160
Chr2	stalkie_big_nohaplotig	exon	85391466	85391678	100	+	.	Parent=comp700408_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85391466	85391555	.	+	0	Parent=comp700408_c0_seq1.mrna1
Chr2	gffcl	locus	85395512	85818391	.	+	.	ID=RLOC_00019161;geneIDs=comp150832_c1_seq1.path1;transcripts=comp150832_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85395512	85818391	.	+	.	ID=comp150832_c1_seq1.mrna1;geneID=comp150832_c1_seq1.path1;Name=comp150832_c1_seq1;Dir=indeterminatecoverage=96.0;identity=86.4;matches=643;mismatches=33;indels=68;unknowns=0;Target=comp150832_c1_seq1 362 219 .;locus=RLOC_00019161
Chr2	stalkie_big_nohaplotig	exon	85395512	85396003	92	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 460 1 .
Chr2	stalkie_big_nohaplotig	exon	85646770	85646772	66	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 463 461 .
Chr2	stalkie_big_nohaplotig	exon	85652053	85652062	100	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 473 464 .
Chr2	stalkie_big_nohaplotig	exon	85663335	85663339	100	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 493 489 .
Chr2	stalkie_big_nohaplotig	exon	85664624	85664629	100	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 499 494 .
Chr2	stalkie_big_nohaplotig	exon	85670349	85670350	100	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 501 500 .
Chr2	stalkie_big_nohaplotig	exon	85678451	85678454	100	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 505 502 .
Chr2	stalkie_big_nohaplotig	exon	85681893	85681898	100	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 511 506 .
Chr2	stalkie_big_nohaplotig	exon	85684770	85684773	100	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 515 512 .
Chr2	stalkie_big_nohaplotig	exon	85699564	85699569	100	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 521 516 .
Chr2	stalkie_big_nohaplotig	exon	85707317	85707347	64	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 549 522 .
Chr2	stalkie_big_nohaplotig	exon	85708963	85708967	100	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 554 550 .
Chr2	stalkie_big_nohaplotig	exon	85725228	85725238	100	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 565 555 .
Chr2	stalkie_big_nohaplotig	exon	85731778	85731797	48	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 596 566 .
Chr2	stalkie_big_nohaplotig	exon	85769971	85769979	100	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 605 597 .
Chr2	stalkie_big_nohaplotig	exon	85779710	85779717	100	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 635 628 .
Chr2	stalkie_big_nohaplotig	exon	85790513	85790559	50	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 721 655 .
Chr2	stalkie_big_nohaplotig	exon	85791289	85791296	100	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 729 722 .
Chr2	stalkie_big_nohaplotig	exon	85799298	85799304	100	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 736 730 .
Chr2	stalkie_big_nohaplotig	exon	85804726	85804727	100	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 738 737 .
Chr2	stalkie_big_nohaplotig	exon	85806134	85806149	81	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 752 739 .
Chr2	stalkie_big_nohaplotig	exon	85813289	85813293	100	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 757 753 .
Chr2	stalkie_big_nohaplotig	exon	85818388	85818391	100	+	.	Parent=comp150832_c1_seq1.mrna1;Target=comp150832_c1_seq1 761 758 .
Chr2	stalkie_big_nohaplotig	CDS	85395748	85395905	.	+	0	Parent=comp150832_c1_seq1.mrna1
Chr2	gffcl	locus	85466388	85473181	.	+	.	ID=RLOC_00019162;geneIDs=FBgn0039197.2.path2,FBgn0039198.1.path1;transcripts=FBgn0039198.1.mrna1,FBgn0039197.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	85466388	85469651	.	+	.	ID=FBgn0039198.1.mrna1;geneID=FBgn0039198.1.path1;Name=FBgn0039198.1;Dir=sensecoverage=100.0;identity=99.9;matches=1103;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019162
Chr2	stalkie_big_nohaplotig	exon	85466388	85466987	99	+	.	Parent=FBgn0039198.1.mrna1;Target=FBgn0039198.1 1 600 +
Chr2	stalkie_big_nohaplotig	exon	85468232	85468443	100	+	.	Parent=FBgn0039198.1.mrna1;Target=FBgn0039198.1 601 812 +
Chr2	stalkie_big_nohaplotig	exon	85468541	85468651	100	+	.	Parent=FBgn0039198.1.mrna1;Target=FBgn0039198.1 813 923 +
Chr2	stalkie_big_nohaplotig	exon	85469471	85469651	100	+	.	Parent=FBgn0039198.1.mrna1;Target=FBgn0039198.1 924 1104 +
Chr2	stalkie_big_nohaplotig	CDS	85466388	85466987	.	+	0	Parent=FBgn0039198.1.mrna1;Target=FBgn0039198.1 1 600 +
Chr2	stalkie_big_nohaplotig	CDS	85468232	85468443	.	+	0	Parent=FBgn0039198.1.mrna1;Target=FBgn0039198.1 601 812 +
Chr2	stalkie_big_nohaplotig	CDS	85468541	85468651	.	+	1	Parent=FBgn0039198.1.mrna1;Target=FBgn0039198.1 813 923 +
Chr2	stalkie_big_nohaplotig	CDS	85469471	85469651	.	+	1	Parent=FBgn0039198.1.mrna1;Target=FBgn0039198.1 924 1104 +
Chr2	stalkie_big_nohaplotig	mRNA	85468541	85473181	.	+	.	ID=FBgn0039197.2.mrna2;geneID=FBgn0039197.2.path2;Name=FBgn0039197.2;Dir=sensecoverage=17.6;identity=100.0;matches=136;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019162
Chr2	stalkie_big_nohaplotig	exon	85468541	85468651	100	+	.	Parent=FBgn0039197.2.mrna2;Target=FBgn0039197.2 639 749 +
Chr2	stalkie_big_nohaplotig	exon	85473157	85473181	100	+	.	Parent=FBgn0039197.2.mrna2;Target=FBgn0039197.2 750 774 +
Chr2	stalkie_big_nohaplotig	CDS	85468541	85468651	.	+	2	Parent=FBgn0039197.2.mrna2;Target=FBgn0039197.2 639 749 +
Chr2	stalkie_big_nohaplotig	CDS	85473157	85473181	.	+	2	Parent=FBgn0039197.2.mrna2;Target=FBgn0039197.2 750 774 +
Chr2	gffcl	locus	85473199	85485052	.	-	.	ID=RLOC_00019163;geneIDs=FBgn0039197.1.path1;transcripts=FBgn0039197.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85473199	85485052	.	-	.	ID=FBgn0039197.1.mrna1;geneID=FBgn0039197.1.path1;Name=FBgn0039197.1;Dir=sensecoverage=100.0;identity=97.2;matches=790;mismatches=2;indels=21;unknowns=0;locus=RLOC_00019163
Chr2	stalkie_big_nohaplotig	exon	85473199	85473316	100	-	.	Parent=FBgn0039197.1.mrna1;Target=FBgn0039197.1 675 792 +
Chr2	stalkie_big_nohaplotig	exon	85480730	85480843	100	-	.	Parent=FBgn0039197.1.mrna1;Target=FBgn0039197.1 561 674 +
Chr2	stalkie_big_nohaplotig	exon	85480903	85481060	100	-	.	Parent=FBgn0039197.1.mrna1;Target=FBgn0039197.1 403 560 +
Chr2	stalkie_big_nohaplotig	exon	85484630	85485052	94	-	.	Parent=FBgn0039197.1.mrna1;Target=FBgn0039197.1 1 402 +
Chr2	stalkie_big_nohaplotig	CDS	85473199	85473316	.	-	1	Parent=FBgn0039197.1.mrna1;Target=FBgn0039197.1 675 792 +
Chr2	stalkie_big_nohaplotig	CDS	85480730	85480843	.	-	1	Parent=FBgn0039197.1.mrna1;Target=FBgn0039197.1 561 674 +
Chr2	stalkie_big_nohaplotig	CDS	85480903	85481060	.	-	0	Parent=FBgn0039197.1.mrna1;Target=FBgn0039197.1 403 560 +
Chr2	stalkie_big_nohaplotig	CDS	85484630	85485052	.	-	0	Parent=FBgn0039197.1.mrna1;Target=FBgn0039197.1 1 402 +
Chr2	gffcl	locus	85516426	85517549	.	-	.	ID=RLOC_00019164;geneIDs=comp159869_c1_seq1.path1;transcripts=comp159869_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85516426	85517549	.	-	.	ID=comp159869_c1_seq1.mrna1;geneID=comp159869_c1_seq1.path1;Name=comp159869_c1_seq1;Dir=indeterminatecoverage=68.4;identity=92.6;matches=1046;mismatches=60;indels=24;unknowns=0;Target=comp159869_c1_seq1 1112 1 .;CDS_Target=comp159869_c1_seq1 248 90 .;locus=RLOC_00019164
Chr2	stalkie_big_nohaplotig	exon	85516426	85517549	92	-	.	Parent=comp159869_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85517303	85517460	.	-	0	Parent=comp159869_c1_seq1.mrna1
Chr2	gffcl	locus	85563595	85564181	.	-	.	ID=RLOC_00019166;geneIDs=FBgn0261994.2.path1;transcripts=FBgn0261994.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85563595	85564181	.	-	.	ID=FBgn0261994.2.mrna1;geneID=FBgn0261994.2.path1;Name=FBgn0261994.2;Dir=sensecoverage=100.0;identity=99.5;matches=430;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019166
Chr2	stalkie_big_nohaplotig	exon	85563595	85563748	99	-	.	Parent=FBgn0261994.2.mrna1;Target=FBgn0261994.2 279 432 +
Chr2	stalkie_big_nohaplotig	exon	85563815	85563925	100	-	.	Parent=FBgn0261994.2.mrna1;Target=FBgn0261994.2 168 278 +
Chr2	stalkie_big_nohaplotig	exon	85564015	85564181	99	-	.	Parent=FBgn0261994.2.mrna1;Target=FBgn0261994.2 1 167 +
Chr2	stalkie_big_nohaplotig	CDS	85563595	85563748	.	-	1	Parent=FBgn0261994.2.mrna1;Target=FBgn0261994.2 279 432 +
Chr2	stalkie_big_nohaplotig	CDS	85563815	85563925	.	-	1	Parent=FBgn0261994.2.mrna1;Target=FBgn0261994.2 168 278 +
Chr2	stalkie_big_nohaplotig	CDS	85564015	85564181	.	-	0	Parent=FBgn0261994.2.mrna1;Target=FBgn0261994.2 1 167 +
Chr2	gffcl	locus	85567156	85578992	.	-	.	ID=RLOC_00019167;geneIDs=comp162274_c0_seq1.path1;transcripts=comp162274_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85567156	85578992	.	-	.	ID=comp162274_c0_seq1.mrna1;geneID=comp162274_c0_seq1.path1;Name=comp162274_c0_seq1;Dir=antisensecoverage=98.4;identity=99.6;matches=2467;mismatches=8;indels=1;unknowns=0;Target=comp162274_c0_seq1 405 596 .;locus=RLOC_00019167
Chr2	stalkie_big_nohaplotig	exon	85567156	85567845	100	-	.	Parent=comp162274_c0_seq1.mrna1;Target=comp162274_c0_seq1 1 690 -
Chr2	stalkie_big_nohaplotig	exon	85573109	85573412	99	-	.	Parent=comp162274_c0_seq1.mrna1;Target=comp162274_c0_seq1 691 994 -
Chr2	stalkie_big_nohaplotig	exon	85573497	85573738	99	-	.	Parent=comp162274_c0_seq1.mrna1;Target=comp162274_c0_seq1 995 1236 -
Chr2	stalkie_big_nohaplotig	exon	85577754	85578992	99	-	.	Parent=comp162274_c0_seq1.mrna1;Target=comp162274_c0_seq1 1237 2476 -
Chr2	stalkie_big_nohaplotig	CDS	85567560	85567751	.	-	0	Parent=comp162274_c0_seq1.mrna1
Chr2	gffcl	locus	85581694	85582875	.	+	.	ID=RLOC_00019168;geneIDs=FBgn0053339.1.path1;transcripts=FBgn0053339.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85581694	85582875	.	+	.	ID=FBgn0053339.1.mrna1;geneID=FBgn0053339.1.path1;Name=FBgn0053339.1;Dir=sensecoverage=100.0;identity=99.6;matches=1016;mismatches=4;indels=0;unknowns=0;locus=RLOC_00019168
Chr2	stalkie_big_nohaplotig	exon	85581694	85582190	99	+	.	Parent=FBgn0053339.1.mrna1;Target=FBgn0053339.1 1 497 +
Chr2	stalkie_big_nohaplotig	exon	85582239	85582517	100	+	.	Parent=FBgn0053339.1.mrna1;Target=FBgn0053339.1 498 776 +
Chr2	stalkie_big_nohaplotig	exon	85582572	85582682	100	+	.	Parent=FBgn0053339.1.mrna1;Target=FBgn0053339.1 777 887 +
Chr2	stalkie_big_nohaplotig	exon	85582743	85582875	99	+	.	Parent=FBgn0053339.1.mrna1;Target=FBgn0053339.1 888 1020 +
Chr2	stalkie_big_nohaplotig	CDS	85581694	85582190	.	+	0	Parent=FBgn0053339.1.mrna1;Target=FBgn0053339.1 1 497 +
Chr2	stalkie_big_nohaplotig	CDS	85582239	85582517	.	+	1	Parent=FBgn0053339.1.mrna1;Target=FBgn0053339.1 498 776 +
Chr2	stalkie_big_nohaplotig	CDS	85582572	85582682	.	+	1	Parent=FBgn0053339.1.mrna1;Target=FBgn0053339.1 777 887 +
Chr2	stalkie_big_nohaplotig	CDS	85582743	85582875	.	+	1	Parent=FBgn0053339.1.mrna1;Target=FBgn0053339.1 888 1020 +
Chr2	gffcl	locus	85584871	85588510	.	+	.	ID=RLOC_00019169;geneIDs=FBgn0039189.1.path1,comp134819_c0_seq1.path2;transcripts=FBgn0039189.1.mrna1,comp134819_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	85584871	85588510	.	+	.	ID=FBgn0039189.1.mrna1;geneID=FBgn0039189.1.path1;Name=FBgn0039189.1;Dir=sensecoverage=100.0;identity=99.0;matches=1479;mismatches=15;indels=0;unknowns=0;locus=RLOC_00019169
Chr2	stalkie_big_nohaplotig	exon	85584871	85584967	98	+	.	Parent=FBgn0039189.1.mrna1;Target=FBgn0039189.1 1 97 +
Chr2	stalkie_big_nohaplotig	exon	85585030	85585430	98	+	.	Parent=FBgn0039189.1.mrna1;Target=FBgn0039189.1 98 498 +
Chr2	stalkie_big_nohaplotig	exon	85585480	85585798	99	+	.	Parent=FBgn0039189.1.mrna1;Target=FBgn0039189.1 499 817 +
Chr2	stalkie_big_nohaplotig	exon	85585853	85586285	99	+	.	Parent=FBgn0039189.1.mrna1;Target=FBgn0039189.1 818 1250 +
Chr2	stalkie_big_nohaplotig	exon	85588267	85588510	97	+	.	Parent=FBgn0039189.1.mrna1;Target=FBgn0039189.1 1251 1494 +
Chr2	stalkie_big_nohaplotig	CDS	85584871	85584967	.	+	0	Parent=FBgn0039189.1.mrna1;Target=FBgn0039189.1 1 97 +
Chr2	stalkie_big_nohaplotig	CDS	85585030	85585430	.	+	2	Parent=FBgn0039189.1.mrna1;Target=FBgn0039189.1 98 498 +
Chr2	stalkie_big_nohaplotig	CDS	85585480	85585798	.	+	0	Parent=FBgn0039189.1.mrna1;Target=FBgn0039189.1 499 817 +
Chr2	stalkie_big_nohaplotig	CDS	85585853	85586285	.	+	2	Parent=FBgn0039189.1.mrna1;Target=FBgn0039189.1 818 1250 +
Chr2	stalkie_big_nohaplotig	CDS	85588267	85588510	.	+	1	Parent=FBgn0039189.1.mrna1;Target=FBgn0039189.1 1251 1494 +
Chr2	stalkie_big_nohaplotig	mRNA	85584978	85585061	.	+	.	ID=comp134819_c0_seq1.mrna2;geneID=comp134819_c0_seq1.path2;Name=comp134819_c0_seq1;Dir=indeterminatecoverage=20.8;identity=98.8;matches=83;mismatches=1;indels=0;unknowns=0;Target=comp134819_c0_seq1 404 321 .;CDS_Target=comp134819_c0_seq1 403 321 .;locus=RLOC_00019169
Chr2	stalkie_big_nohaplotig	exon	85584978	85585061	98	+	.	Parent=comp134819_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	85584978	85585060	.	+	1	Parent=comp134819_c0_seq1.mrna2
Chr2	gffcl	locus	85590341	85593799	.	+	.	ID=RLOC_00019170;geneIDs=FBgn0260946.1.path1;transcripts=FBgn0260946.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85590341	85593799	.	+	.	ID=FBgn0260946.1.mrna1;geneID=FBgn0260946.1.path1;Name=FBgn0260946.1;Dir=sensecoverage=100.0;identity=99.9;matches=2067;mismatches=3;indels=0;unknowns=0;locus=RLOC_00019170
Chr2	stalkie_big_nohaplotig	exon	85590341	85590425	100	+	.	Parent=FBgn0260946.1.mrna1;Target=FBgn0260946.1 1 85 +
Chr2	stalkie_big_nohaplotig	exon	85590479	85590634	99	+	.	Parent=FBgn0260946.1.mrna1;Target=FBgn0260946.1 86 241 +
Chr2	stalkie_big_nohaplotig	exon	85590697	85591024	100	+	.	Parent=FBgn0260946.1.mrna1;Target=FBgn0260946.1 242 569 +
Chr2	stalkie_big_nohaplotig	exon	85591083	85591224	99	+	.	Parent=FBgn0260946.1.mrna1;Target=FBgn0260946.1 570 711 +
Chr2	stalkie_big_nohaplotig	exon	85591294	85591942	99	+	.	Parent=FBgn0260946.1.mrna1;Target=FBgn0260946.1 712 1360 +
Chr2	stalkie_big_nohaplotig	exon	85592948	85593078	100	+	.	Parent=FBgn0260946.1.mrna1;Target=FBgn0260946.1 1361 1491 +
Chr2	stalkie_big_nohaplotig	exon	85593151	85593549	100	+	.	Parent=FBgn0260946.1.mrna1;Target=FBgn0260946.1 1492 1890 +
Chr2	stalkie_big_nohaplotig	exon	85593620	85593799	100	+	.	Parent=FBgn0260946.1.mrna1;Target=FBgn0260946.1 1891 2070 +
Chr2	stalkie_big_nohaplotig	CDS	85590341	85590425	.	+	0	Parent=FBgn0260946.1.mrna1;Target=FBgn0260946.1 1 85 +
Chr2	stalkie_big_nohaplotig	CDS	85590479	85590634	.	+	2	Parent=FBgn0260946.1.mrna1;Target=FBgn0260946.1 86 241 +
Chr2	stalkie_big_nohaplotig	CDS	85590697	85591024	.	+	2	Parent=FBgn0260946.1.mrna1;Target=FBgn0260946.1 242 569 +
Chr2	stalkie_big_nohaplotig	CDS	85591083	85591224	.	+	1	Parent=FBgn0260946.1.mrna1;Target=FBgn0260946.1 570 711 +
Chr2	stalkie_big_nohaplotig	CDS	85591294	85591942	.	+	0	Parent=FBgn0260946.1.mrna1;Target=FBgn0260946.1 712 1360 +
Chr2	stalkie_big_nohaplotig	CDS	85592948	85593078	.	+	2	Parent=FBgn0260946.1.mrna1;Target=FBgn0260946.1 1361 1491 +
Chr2	stalkie_big_nohaplotig	CDS	85593151	85593549	.	+	0	Parent=FBgn0260946.1.mrna1;Target=FBgn0260946.1 1492 1890 +
Chr2	stalkie_big_nohaplotig	CDS	85593620	85593799	.	+	0	Parent=FBgn0260946.1.mrna1;Target=FBgn0260946.1 1891 2070 +
Chr2	gffcl	locus	85598934	85612751	.	-	.	ID=RLOC_00019171;geneIDs=FBgn0001139.1.path1;transcripts=FBgn0001139.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85598934	85612751	.	-	.	ID=FBgn0001139.1.mrna1;geneID=FBgn0001139.1.path1;Name=FBgn0001139.1;Dir=sensecoverage=100.0;identity=99.9;matches=2191;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019171
Chr2	stalkie_big_nohaplotig	exon	85598934	85599038	100	-	.	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 2089 2193 +
Chr2	stalkie_big_nohaplotig	exon	85599144	85599343	100	-	.	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 1889 2088 +
Chr2	stalkie_big_nohaplotig	exon	85600534	85601207	100	-	.	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 1215 1888 +
Chr2	stalkie_big_nohaplotig	exon	85601279	85601553	99	-	.	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 940 1214 +
Chr2	stalkie_big_nohaplotig	exon	85601630	85601812	100	-	.	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 757 939 +
Chr2	stalkie_big_nohaplotig	exon	85602248	85602304	100	-	.	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 700 756 +
Chr2	stalkie_big_nohaplotig	exon	85602663	85602761	100	-	.	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 601 699 +
Chr2	stalkie_big_nohaplotig	exon	85602830	85603036	99	-	.	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 394 600 +
Chr2	stalkie_big_nohaplotig	exon	85609978	85610115	100	-	.	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 256 393 +
Chr2	stalkie_big_nohaplotig	exon	85610227	85610271	100	-	.	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 211 255 +
Chr2	stalkie_big_nohaplotig	exon	85610354	85610417	100	-	.	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 147 210 +
Chr2	stalkie_big_nohaplotig	exon	85612535	85612629	100	-	.	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 52 146 +
Chr2	stalkie_big_nohaplotig	exon	85612701	85612751	100	-	.	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 1 51 +
Chr2	stalkie_big_nohaplotig	CDS	85598934	85599038	.	-	0	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 2089 2193 +
Chr2	stalkie_big_nohaplotig	CDS	85599144	85599343	.	-	2	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 1889 2088 +
Chr2	stalkie_big_nohaplotig	CDS	85600534	85601207	.	-	1	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 1215 1888 +
Chr2	stalkie_big_nohaplotig	CDS	85601279	85601553	.	-	0	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 940 1214 +
Chr2	stalkie_big_nohaplotig	CDS	85601630	85601812	.	-	0	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 757 939 +
Chr2	stalkie_big_nohaplotig	CDS	85602248	85602304	.	-	0	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 700 756 +
Chr2	stalkie_big_nohaplotig	CDS	85602663	85602761	.	-	0	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 601 699 +
Chr2	stalkie_big_nohaplotig	CDS	85602830	85603036	.	-	0	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 394 600 +
Chr2	stalkie_big_nohaplotig	CDS	85609978	85610115	.	-	0	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 256 393 +
Chr2	stalkie_big_nohaplotig	CDS	85610227	85610271	.	-	0	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 211 255 +
Chr2	stalkie_big_nohaplotig	CDS	85610354	85610417	.	-	1	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 147 210 +
Chr2	stalkie_big_nohaplotig	CDS	85612535	85612629	.	-	0	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 52 146 +
Chr2	stalkie_big_nohaplotig	CDS	85612701	85612751	.	-	0	Parent=FBgn0001139.1.mrna1;Target=FBgn0001139.1 1 51 +
Chr2	gffcl	locus	85614074	85921776	.	+	.	ID=RLOC_00019172;geneIDs=comp159927_c1_seq1.path1;transcripts=comp159927_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85614074	85921776	.	+	.	ID=comp159927_c1_seq1.mrna1;geneID=comp159927_c1_seq1.path1;Name=comp159927_c1_seq1;Dir=antisensecoverage=60.3;identity=94.0;matches=1362;mismatches=65;indels=22;unknowns=0;Target=comp159927_c1_seq1 1294 1323 .;locus=RLOC_00019172
Chr2	stalkie_big_nohaplotig	exon	85614074	85614078	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1540 1544 -
Chr2	stalkie_big_nohaplotig	exon	85616599	85616609	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1516 1526 -
Chr2	stalkie_big_nohaplotig	exon	85623492	85623505	92	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1502 1515 -
Chr2	stalkie_big_nohaplotig	exon	85627570	85627573	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1498 1501 -
Chr2	stalkie_big_nohaplotig	exon	85640798	85640799	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1496 1497 -
Chr2	stalkie_big_nohaplotig	exon	85644859	85644867	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1486 1494 -
Chr2	stalkie_big_nohaplotig	exon	85644937	85644942	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1419 1424 -
Chr2	stalkie_big_nohaplotig	exon	85683934	85683948	80	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1404 1418 -
Chr2	stalkie_big_nohaplotig	exon	85687969	85687972	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1400 1403 -
Chr2	stalkie_big_nohaplotig	exon	85693298	85693299	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1398 1399 -
Chr2	stalkie_big_nohaplotig	exon	85704269	85704277	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1372 1380 -
Chr2	stalkie_big_nohaplotig	exon	85707868	85707876	88	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1363 1371 -
Chr2	stalkie_big_nohaplotig	exon	85708510	85708512	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1360 1362 -
Chr2	stalkie_big_nohaplotig	exon	85718009	85718011	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1357 1359 -
Chr2	stalkie_big_nohaplotig	exon	85718371	85718376	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1351 1356 -
Chr2	stalkie_big_nohaplotig	exon	85720555	85720558	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1347 1350 -
Chr2	stalkie_big_nohaplotig	exon	85736247	85736255	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1338 1346 -
Chr2	stalkie_big_nohaplotig	exon	85756433	85756479	58	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1287 1337 -
Chr2	stalkie_big_nohaplotig	exon	85784440	85784448	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1278 1286 -
Chr2	stalkie_big_nohaplotig	exon	85790012	85790024	84	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1265 1277 -
Chr2	stalkie_big_nohaplotig	exon	85790415	85790466	46	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1220 1264 -
Chr2	stalkie_big_nohaplotig	exon	85803158	85803172	86	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1199 1212 -
Chr2	stalkie_big_nohaplotig	exon	85805148	85805157	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1189 1198 -
Chr2	stalkie_big_nohaplotig	exon	85811622	85811646	67	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1158 1188 -
Chr2	stalkie_big_nohaplotig	exon	85838801	85838803	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1155 1157 -
Chr2	stalkie_big_nohaplotig	exon	85856554	85856561	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1147 1154 -
Chr2	stalkie_big_nohaplotig	exon	85858255	85858262	87	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1139 1146 -
Chr2	stalkie_big_nohaplotig	exon	85861444	85861459	81	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1123 1138 -
Chr2	stalkie_big_nohaplotig	exon	85864392	85864398	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1116 1122 -
Chr2	stalkie_big_nohaplotig	exon	85870867	85870868	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1114 1115 -
Chr2	stalkie_big_nohaplotig	exon	85874603	85874608	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1108 1113 -
Chr2	stalkie_big_nohaplotig	exon	85881388	85881393	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1102 1107 -
Chr2	stalkie_big_nohaplotig	exon	85888109	85888115	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1095 1101 -
Chr2	stalkie_big_nohaplotig	exon	85889334	85889358	76	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1071 1094 -
Chr2	stalkie_big_nohaplotig	exon	85899208	85899218	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1056 1066 -
Chr2	stalkie_big_nohaplotig	exon	85902433	85902441	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1042 1050 -
Chr2	stalkie_big_nohaplotig	exon	85905867	85905870	100	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1038 1041 -
Chr2	stalkie_big_nohaplotig	exon	85920743	85921776	99	+	.	Parent=comp159927_c1_seq1.mrna1;Target=comp159927_c1_seq1 1 1037 -
Chr2	stalkie_big_nohaplotig	CDS	85756444	85756472	.	+	0	Parent=comp159927_c1_seq1.mrna1
Chr2	gffcl	locus	85619101	85620737	.	+	.	ID=RLOC_00019173;geneIDs=Dv_FBgn0198541.1.path1;transcripts=Dv_FBgn0198541.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85619101	85620737	.	+	.	ID=Dv_FBgn0198541.1.mrna1;geneID=Dv_FBgn0198541.1.path1;Name=Dv_FBgn0198541.1;Dir=sensecoverage=100.0;identity=98.8;matches=738;mismatches=9;indels=0;unknowns=0;locus=RLOC_00019173
Chr2	stalkie_big_nohaplotig	exon	85619101	85619490	98	+	.	Parent=Dv_FBgn0198541.1.mrna1;Target=Dv_FBgn0198541.1 1 390 +
Chr2	stalkie_big_nohaplotig	exon	85620381	85620737	98	+	.	Parent=Dv_FBgn0198541.1.mrna1;Target=Dv_FBgn0198541.1 391 747 +
Chr2	stalkie_big_nohaplotig	CDS	85619101	85619490	.	+	0	Parent=Dv_FBgn0198541.1.mrna1;Target=Dv_FBgn0198541.1 1 390 +
Chr2	stalkie_big_nohaplotig	CDS	85620381	85620737	.	+	0	Parent=Dv_FBgn0198541.1.mrna1;Target=Dv_FBgn0198541.1 391 747 +
Chr2	gffcl	locus	85622059	85623016	.	-	.	ID=RLOC_00019174;geneIDs=FBgn0029980.1.path1;transcripts=FBgn0029980.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85622059	85623016	.	-	.	ID=FBgn0029980.1.mrna1;geneID=FBgn0029980.1.path1;Name=FBgn0029980.1;Dir=sensecoverage=100.0;identity=99.8;matches=892;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019174
Chr2	stalkie_big_nohaplotig	exon	85622059	85622283	99	-	.	Parent=FBgn0029980.1.mrna1;Target=FBgn0029980.1 670 894 +
Chr2	stalkie_big_nohaplotig	exon	85622348	85623016	100	-	.	Parent=FBgn0029980.1.mrna1;Target=FBgn0029980.1 1 669 +
Chr2	stalkie_big_nohaplotig	CDS	85622059	85622283	.	-	0	Parent=FBgn0029980.1.mrna1;Target=FBgn0029980.1 670 894 +
Chr2	stalkie_big_nohaplotig	CDS	85622348	85623016	.	-	0	Parent=FBgn0029980.1.mrna1;Target=FBgn0029980.1 1 669 +
Chr2	gffcl	locus	85626647	85627376	.	-	.	ID=RLOC_00019175;geneIDs=comp160646_c1_seq1.path1;transcripts=comp160646_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85626647	85627376	.	-	.	ID=comp160646_c1_seq1.mrna1;geneID=comp160646_c1_seq1.path1;Name=comp160646_c1_seq1;Dir=sensecoverage=99.3;identity=97.6;matches=651;mismatches=14;indels=2;unknowns=0;Target=comp160646_c1_seq1 5 313 +;locus=RLOC_00019175
Chr2	stalkie_big_nohaplotig	exon	85626647	85626810	98	-	.	Parent=comp160646_c1_seq1.mrna1;Target=comp160646_c1_seq1 507 671 +
Chr2	stalkie_big_nohaplotig	exon	85626876	85627376	97	-	.	Parent=comp160646_c1_seq1.mrna1;Target=comp160646_c1_seq1 5 506 +
Chr2	stalkie_big_nohaplotig	CDS	85627069	85627376	.	-	0	Parent=comp160646_c1_seq1.mrna1
Chr2	gffcl	locus	85629311	85630009	.	-	.	ID=RLOC_00019177;geneIDs=comp154219_c0_seq1.path1;transcripts=comp154219_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85629311	85630009	.	-	.	ID=comp154219_c0_seq1.mrna1;geneID=comp154219_c0_seq1.path1;Name=comp154219_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=556;mismatches=0;indels=0;unknowns=0;Target=comp154219_c0_seq1 359 556 .;locus=RLOC_00019177
Chr2	stalkie_big_nohaplotig	exon	85629311	85629386	100	-	.	Parent=comp154219_c0_seq1.mrna1;Target=comp154219_c0_seq1 1 76 -
Chr2	stalkie_big_nohaplotig	exon	85629476	85629587	100	-	.	Parent=comp154219_c0_seq1.mrna1;Target=comp154219_c0_seq1 77 188 -
Chr2	stalkie_big_nohaplotig	exon	85629642	85630009	100	-	.	Parent=comp154219_c0_seq1.mrna1;Target=comp154219_c0_seq1 189 556 -
Chr2	stalkie_big_nohaplotig	CDS	85629812	85630009	.	-	0	Parent=comp154219_c0_seq1.mrna1
Chr2	gffcl	locus	85651402	85651584	.	+	.	ID=RLOC_00019178;geneIDs=FBgn0039411.1.path1;transcripts=FBgn0039411.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85651402	85651584	.	+	.	ID=FBgn0039411.1.mrna1;geneID=FBgn0039411.1.path1;Name=FBgn0039411.1;Dir=indeterminatecoverage=7.6;identity=100.0;matches=183;mismatches=0;indels=0;unknowns=0;Target=FBgn0039411.1 220 38 .;CDS_Target=FBgn0039411.1 220 40 .;locus=RLOC_00019178
Chr2	stalkie_big_nohaplotig	exon	85651402	85651584	100	+	.	Parent=FBgn0039411.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85651404	85651584	.	+	0	Parent=FBgn0039411.1.mrna1
Chr2	gffcl	locus	85680062	85680966	.	+	.	ID=RLOC_00019179;geneIDs=comp140654_c1_seq1.path1;transcripts=comp140654_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85680062	85680966	.	+	.	ID=comp140654_c1_seq1.mrna1;geneID=comp140654_c1_seq1.path1;Name=comp140654_c1_seq1;Dir=indeterminatecoverage=100.0;identity=86.4;matches=494;mismatches=25;indels=53;unknowns=0;Target=comp140654_c1_seq1 520 257 .;locus=RLOC_00019179
Chr2	stalkie_big_nohaplotig	exon	85680062	85680274	82	+	.	Parent=comp140654_c1_seq1.mrna1;Target=comp140654_c1_seq1 207 1 .
Chr2	stalkie_big_nohaplotig	exon	85680611	85680966	88	+	.	Parent=comp140654_c1_seq1.mrna1;Target=comp140654_c1_seq1 522 208 .
Chr2	stalkie_big_nohaplotig	CDS	85680701	85680964	.	+	0	Parent=comp140654_c1_seq1.mrna1
Chr2	gffcl	locus	85712867	85713833	.	-	.	ID=RLOC_00019180;geneIDs=ORF2452.path1;transcripts=ORF2452.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85712867	85713833	.	-	.	ID=ORF2452.mrna1;geneID=ORF2452.path1;Name=ORF2452;Dir=sensecoverage=100.0;identity=98.4;matches=844;mismatches=14;indels=0;unknowns=0;locus=RLOC_00019180
Chr2	stalkie_big_nohaplotig	exon	85712867	85713205	98	-	.	Parent=ORF2452.mrna1;Target=ORF2452 520 858 +
Chr2	stalkie_big_nohaplotig	exon	85713265	85713465	98	-	.	Parent=ORF2452.mrna1;Target=ORF2452 319 519 +
Chr2	stalkie_big_nohaplotig	exon	85713516	85713833	98	-	.	Parent=ORF2452.mrna1;Target=ORF2452 1 318 +
Chr2	stalkie_big_nohaplotig	CDS	85712867	85713205	.	-	0	Parent=ORF2452.mrna1;Target=ORF2452 520 858 +
Chr2	stalkie_big_nohaplotig	CDS	85713265	85713465	.	-	0	Parent=ORF2452.mrna1;Target=ORF2452 319 519 +
Chr2	stalkie_big_nohaplotig	CDS	85713516	85713833	.	-	0	Parent=ORF2452.mrna1;Target=ORF2452 1 318 +
Chr2	gffcl	locus	85715701	85727259	.	+	.	ID=RLOC_00019181;geneIDs=FBgn0039187.1.path1,comp153339_c0_seq1.path1;transcripts=FBgn0039187.1.mrna1,comp153339_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85715701	85727259	.	+	.	ID=FBgn0039187.1.mrna1;geneID=FBgn0039187.1.path1;Name=FBgn0039187.1;Dir=sensecoverage=100.0;identity=99.8;matches=3286;mismatches=5;indels=0;unknowns=0;locus=RLOC_00019181
Chr2	stalkie_big_nohaplotig	exon	85715701	85715879	100	+	.	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 1 179 +
Chr2	stalkie_big_nohaplotig	exon	85716029	85716330	99	+	.	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 180 481 +
Chr2	stalkie_big_nohaplotig	exon	85716395	85716555	100	+	.	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 482 642 +
Chr2	stalkie_big_nohaplotig	exon	85716629	85716810	100	+	.	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 643 824 +
Chr2	stalkie_big_nohaplotig	exon	85719025	85719284	99	+	.	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 825 1084 +
Chr2	stalkie_big_nohaplotig	exon	85722563	85722896	100	+	.	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 1085 1418 +
Chr2	stalkie_big_nohaplotig	exon	85722990	85723414	100	+	.	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 1419 1843 +
Chr2	stalkie_big_nohaplotig	exon	85723475	85724174	100	+	.	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 1844 2543 +
Chr2	stalkie_big_nohaplotig	exon	85724312	85724399	100	+	.	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 2544 2631 +
Chr2	stalkie_big_nohaplotig	exon	85726035	85726361	99	+	.	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 2632 2958 +
Chr2	stalkie_big_nohaplotig	exon	85726425	85726592	100	+	.	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 2959 3126 +
Chr2	stalkie_big_nohaplotig	exon	85726661	85726765	99	+	.	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 3127 3231 +
Chr2	stalkie_big_nohaplotig	exon	85727200	85727259	98	+	.	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 3232 3291 +
Chr2	stalkie_big_nohaplotig	CDS	85715701	85715879	.	+	0	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 1 179 +
Chr2	stalkie_big_nohaplotig	CDS	85716029	85716330	.	+	1	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 180 481 +
Chr2	stalkie_big_nohaplotig	CDS	85716395	85716555	.	+	2	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 482 642 +
Chr2	stalkie_big_nohaplotig	CDS	85716629	85716810	.	+	0	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 643 824 +
Chr2	stalkie_big_nohaplotig	CDS	85719025	85719284	.	+	1	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 825 1084 +
Chr2	stalkie_big_nohaplotig	CDS	85722563	85722896	.	+	2	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 1085 1418 +
Chr2	stalkie_big_nohaplotig	CDS	85722990	85723414	.	+	1	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 1419 1843 +
Chr2	stalkie_big_nohaplotig	CDS	85723475	85724174	.	+	2	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 1844 2543 +
Chr2	stalkie_big_nohaplotig	CDS	85724312	85724399	.	+	1	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 2544 2631 +
Chr2	stalkie_big_nohaplotig	CDS	85726035	85726361	.	+	0	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 2632 2958 +
Chr2	stalkie_big_nohaplotig	CDS	85726425	85726592	.	+	0	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 2959 3126 +
Chr2	stalkie_big_nohaplotig	CDS	85726661	85726765	.	+	0	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 3127 3231 +
Chr2	stalkie_big_nohaplotig	CDS	85727200	85727259	.	+	0	Parent=FBgn0039187.1.mrna1;Target=FBgn0039187.1 3232 3291 +
Chr2	stalkie_big_nohaplotig	mRNA	85719262	85719635	.	+	.	ID=comp153339_c0_seq1.mrna1;geneID=comp153339_c0_seq1.path1;Name=comp153339_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=369;mismatches=5;indels=1;unknowns=0;Target=comp153339_c0_seq1 375 1 .;CDS_Target=comp153339_c0_seq1 82 2 .;locus=RLOC_00019181
Chr2	stalkie_big_nohaplotig	exon	85719262	85719635	98	+	.	Parent=comp153339_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85719263	85719343	.	+	0	Parent=comp153339_c0_seq1.mrna1
Chr2	gffcl	locus	85720589	85721041	.	+	.	ID=RLOC_00019182;geneIDs=comp144279_c0_seq1.path1;transcripts=comp144279_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85720589	85721041	.	+	.	ID=comp144279_c0_seq1.mrna1;geneID=comp144279_c0_seq1.path1;Name=comp144279_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=442;mismatches=11;indels=0;unknowns=0;Target=comp144279_c0_seq1 453 1 .;CDS_Target=comp144279_c0_seq1 375 304 .;locus=RLOC_00019182
Chr2	stalkie_big_nohaplotig	exon	85720589	85721041	97	+	.	Parent=comp144279_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85720892	85720963	.	+	0	Parent=comp144279_c0_seq1.mrna1
Chr2	gffcl	locus	85729266	85731187	.	+	.	ID=RLOC_00019183;geneIDs=FBgn0039188.1.path1;transcripts=FBgn0039188.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85729266	85731187	.	+	.	ID=FBgn0039188.1.mrna1;geneID=FBgn0039188.1.path1;Name=FBgn0039188.1;Dir=sensecoverage=100.0;identity=99.7;matches=1618;mismatches=5;indels=0;unknowns=0;locus=RLOC_00019183
Chr2	stalkie_big_nohaplotig	exon	85729266	85729288	100	+	.	Parent=FBgn0039188.1.mrna1;Target=FBgn0039188.1 1 23 +
Chr2	stalkie_big_nohaplotig	exon	85729406	85729762	99	+	.	Parent=FBgn0039188.1.mrna1;Target=FBgn0039188.1 24 380 +
Chr2	stalkie_big_nohaplotig	exon	85729816	85730758	99	+	.	Parent=FBgn0039188.1.mrna1;Target=FBgn0039188.1 381 1323 +
Chr2	stalkie_big_nohaplotig	exon	85730831	85730915	98	+	.	Parent=FBgn0039188.1.mrna1;Target=FBgn0039188.1 1324 1408 +
Chr2	stalkie_big_nohaplotig	exon	85730973	85731187	100	+	.	Parent=FBgn0039188.1.mrna1;Target=FBgn0039188.1 1409 1623 +
Chr2	stalkie_big_nohaplotig	CDS	85729266	85729288	.	+	0	Parent=FBgn0039188.1.mrna1;Target=FBgn0039188.1 1 23 +
Chr2	stalkie_big_nohaplotig	CDS	85729406	85729762	.	+	1	Parent=FBgn0039188.1.mrna1;Target=FBgn0039188.1 24 380 +
Chr2	stalkie_big_nohaplotig	CDS	85729816	85730758	.	+	1	Parent=FBgn0039188.1.mrna1;Target=FBgn0039188.1 381 1323 +
Chr2	stalkie_big_nohaplotig	CDS	85730831	85730915	.	+	0	Parent=FBgn0039188.1.mrna1;Target=FBgn0039188.1 1324 1408 +
Chr2	stalkie_big_nohaplotig	CDS	85730973	85731187	.	+	2	Parent=FBgn0039188.1.mrna1;Target=FBgn0039188.1 1409 1623 +
Chr2	gffcl	locus	85733042	85733871	.	+	.	ID=RLOC_00019184;geneIDs=FBgn0039402.1.path1;transcripts=FBgn0039402.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85733042	85733871	.	+	.	ID=FBgn0039402.1.mrna1;geneID=FBgn0039402.1.path1;Name=FBgn0039402.1;Dir=sensecoverage=99.9;identity=99.5;matches=766;mismatches=4;indels=0;unknowns=0;locus=RLOC_00019184
Chr2	stalkie_big_nohaplotig	exon	85733042	85733383	98	+	.	Parent=FBgn0039402.1.mrna1;Target=FBgn0039402.1 2 343 +
Chr2	stalkie_big_nohaplotig	exon	85733444	85733871	100	+	.	Parent=FBgn0039402.1.mrna1;Target=FBgn0039402.1 344 771 +
Chr2	stalkie_big_nohaplotig	CDS	85733071	85733383	.	+	0	Parent=FBgn0039402.1.mrna1;Target=FBgn0039402.1 31 343 +
Chr2	stalkie_big_nohaplotig	CDS	85733444	85733871	.	+	2	Parent=FBgn0039402.1.mrna1;Target=FBgn0039402.1 344 771 +
Chr2	gffcl	locus	85734623	85735384	.	-	.	ID=RLOC_00019185;geneIDs=FBgn0028833.1.path1;transcripts=FBgn0028833.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85734623	85735384	.	-	.	ID=FBgn0028833.1.mrna1;geneID=FBgn0028833.1.path1;Name=FBgn0028833.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=760;mismatches=2;indels=0;unknowns=0;Target=FBgn0028833.1 762 1 .;locus=RLOC_00019185
Chr2	stalkie_big_nohaplotig	exon	85734623	85735384	99	-	.	Parent=FBgn0028833.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85734623	85735384	.	-	0	Parent=FBgn0028833.1.mrna1
Chr2	gffcl	locus	85737538	85738621	.	-	.	ID=RLOC_00019186;geneIDs=FBgn0039407.1.path1;transcripts=FBgn0039407.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85737538	85738621	.	-	.	ID=FBgn0039407.1.mrna1;geneID=FBgn0039407.1.path1;Name=FBgn0039407.1;Dir=sensecoverage=100.0;identity=99.8;matches=940;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019186
Chr2	stalkie_big_nohaplotig	exon	85737538	85737675	100	-	.	Parent=FBgn0039407.1.mrna1;Target=FBgn0039407.1 805 942 +
Chr2	stalkie_big_nohaplotig	exon	85737743	85737912	100	-	.	Parent=FBgn0039407.1.mrna1;Target=FBgn0039407.1 635 804 +
Chr2	stalkie_big_nohaplotig	exon	85737988	85738621	99	-	.	Parent=FBgn0039407.1.mrna1;Target=FBgn0039407.1 1 634 +
Chr2	stalkie_big_nohaplotig	CDS	85737538	85737675	.	-	0	Parent=FBgn0039407.1.mrna1;Target=FBgn0039407.1 805 942 +
Chr2	stalkie_big_nohaplotig	CDS	85737743	85737912	.	-	2	Parent=FBgn0039407.1.mrna1;Target=FBgn0039407.1 635 804 +
Chr2	stalkie_big_nohaplotig	CDS	85737988	85738621	.	-	0	Parent=FBgn0039407.1.mrna1;Target=FBgn0039407.1 1 634 +
Chr2	gffcl	locus	85782526	85783420	.	+	.	ID=RLOC_00019187;geneIDs=comp163485_c4_seq1.path1;transcripts=comp163485_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85782526	85783420	.	+	.	ID=comp163485_c4_seq1.mrna1;geneID=comp163485_c4_seq1.path1;Name=comp163485_c4_seq1;Dir=indeterminatecoverage=52.0;identity=84.0;matches=766;mismatches=68;indels=78;unknowns=0;Target=comp163485_c4_seq1 1002 152 .;CDS_Target=comp163485_c4_seq1 680 525 .;locus=RLOC_00019187
Chr2	stalkie_big_nohaplotig	exon	85782526	85783420	83	+	.	Parent=comp163485_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85782949	85783104	.	+	0	Parent=comp163485_c4_seq1.mrna1
Chr2	gffcl	locus	85799482	85832777	.	-	.	ID=RLOC_00019188;geneIDs=FBgn0039411.1.path2;transcripts=FBgn0039411.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	85799482	85832777	.	-	.	ID=FBgn0039411.1.mrna2;geneID=FBgn0039411.1.path2;Name=FBgn0039411.1;Dir=sensecoverage=90.9;identity=99.7;matches=2192;mismatches=6;indels=0;unknowns=0;locus=RLOC_00019188
Chr2	stalkie_big_nohaplotig	exon	85799482	85799495	100	-	.	Parent=FBgn0039411.1.mrna2;Target=FBgn0039411.1 2405 2418 +
Chr2	stalkie_big_nohaplotig	exon	85800998	85802322	99	-	.	Parent=FBgn0039411.1.mrna2;Target=FBgn0039411.1 1080 2404 +
Chr2	stalkie_big_nohaplotig	exon	85802755	85802908	100	-	.	Parent=FBgn0039411.1.mrna2;Target=FBgn0039411.1 926 1079 +
Chr2	stalkie_big_nohaplotig	exon	85803049	85803155	100	-	.	Parent=FBgn0039411.1.mrna2;Target=FBgn0039411.1 819 925 +
Chr2	stalkie_big_nohaplotig	exon	85803259	85803443	100	-	.	Parent=FBgn0039411.1.mrna2;Target=FBgn0039411.1 634 818 +
Chr2	stalkie_big_nohaplotig	exon	85811701	85811961	99	-	.	Parent=FBgn0039411.1.mrna2;Target=FBgn0039411.1 373 633 +
Chr2	stalkie_big_nohaplotig	exon	85825401	85825490	100	-	.	Parent=FBgn0039411.1.mrna2;Target=FBgn0039411.1 283 372 +
Chr2	stalkie_big_nohaplotig	exon	85832716	85832777	96	-	.	Parent=FBgn0039411.1.mrna2;Target=FBgn0039411.1 221 282 +
Chr2	stalkie_big_nohaplotig	CDS	85799482	85799495	.	-	1	Parent=FBgn0039411.1.mrna2;Target=FBgn0039411.1 2405 2418 +
Chr2	stalkie_big_nohaplotig	CDS	85800998	85802322	.	-	0	Parent=FBgn0039411.1.mrna2;Target=FBgn0039411.1 1080 2404 +
Chr2	stalkie_big_nohaplotig	CDS	85802755	85802908	.	-	1	Parent=FBgn0039411.1.mrna2;Target=FBgn0039411.1 926 1079 +
Chr2	stalkie_big_nohaplotig	CDS	85803049	85803155	.	-	0	Parent=FBgn0039411.1.mrna2;Target=FBgn0039411.1 819 925 +
Chr2	stalkie_big_nohaplotig	CDS	85803259	85803443	.	-	2	Parent=FBgn0039411.1.mrna2;Target=FBgn0039411.1 634 818 +
Chr2	stalkie_big_nohaplotig	CDS	85811701	85811961	.	-	2	Parent=FBgn0039411.1.mrna2;Target=FBgn0039411.1 373 633 +
Chr2	stalkie_big_nohaplotig	CDS	85825401	85825490	.	-	2	Parent=FBgn0039411.1.mrna2;Target=FBgn0039411.1 283 372 +
Chr2	stalkie_big_nohaplotig	CDS	85832716	85832777	.	-	1	Parent=FBgn0039411.1.mrna2;Target=FBgn0039411.1 221 282 +
Chr2	gffcl	locus	85853424	85854289	.	+	.	ID=RLOC_00019189;geneIDs=comp144130_c0_seq1.path1;transcripts=comp144130_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85853424	85854289	.	+	.	ID=comp144130_c0_seq1.mrna1;geneID=comp144130_c0_seq1.path1;Name=comp144130_c0_seq1;Dir=indeterminatecoverage=98.1;identity=97.8;matches=858;mismatches=8;indels=11;unknowns=0;Target=comp144130_c0_seq1 878 2 .;CDS_Target=comp144130_c0_seq1 613 86 .;locus=RLOC_00019189
Chr2	stalkie_big_nohaplotig	exon	85853424	85854289	97	+	.	Parent=comp144130_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85853497	85854024	.	+	0	Parent=comp144130_c0_seq1.mrna1
Chr2	gffcl	locus	85882774	85883619	.	-	.	ID=RLOC_00019190;geneIDs=comp152775_c0_seq1.path1;transcripts=comp152775_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85882774	85883619	.	-	.	ID=comp152775_c0_seq1.mrna1;geneID=comp152775_c0_seq1.path1;Name=comp152775_c0_seq1;Dir=antisensecoverage=95.3;identity=99.2;matches=784;mismatches=4;indels=2;unknowns=0;Target=comp152775_c0_seq1 353 655 .;locus=RLOC_00019190
Chr2	stalkie_big_nohaplotig	exon	85882774	85883031	99	-	.	Parent=comp152775_c0_seq1.mrna1;Target=comp152775_c0_seq1 2 259 -
Chr2	stalkie_big_nohaplotig	exon	85883090	85883619	99	-	.	Parent=comp152775_c0_seq1.mrna1;Target=comp152775_c0_seq1 260 791 -
Chr2	stalkie_big_nohaplotig	CDS	85883181	85883483	.	-	0	Parent=comp152775_c0_seq1.mrna1
Chr2	gffcl	locus	85891325	85892281	.	+	.	ID=RLOC_00019191;geneIDs=FBgn0001255.1.path1;transcripts=FBgn0001255.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85891325	85892281	.	+	.	ID=FBgn0001255.1.mrna1;geneID=FBgn0001255.1.path1;Name=FBgn0001255.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=952;mismatches=5;indels=0;unknowns=0;Target=FBgn0001255.1 957 1 .;locus=RLOC_00019191
Chr2	stalkie_big_nohaplotig	exon	85891325	85892281	99	+	.	Parent=FBgn0001255.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85891325	85892281	.	+	0	Parent=FBgn0001255.1.mrna1
Chr2	gffcl	locus	85899377	85917381	.	+	.	ID=RLOC_00019192;geneIDs=FBgn0037541.1.path1;transcripts=FBgn0037541.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85899377	85917381	.	+	.	ID=FBgn0037541.1.mrna1;geneID=FBgn0037541.1.path1;Name=FBgn0037541.1;Dir=sensecoverage=100.0;identity=99.8;matches=5316;mismatches=9;indels=1;unknowns=2;locus=RLOC_00019192
Chr2	stalkie_big_nohaplotig	exon	85899377	85899453	100	+	.	Parent=FBgn0037541.1.mrna1;Target=FBgn0037541.1 1 77 +
Chr2	stalkie_big_nohaplotig	exon	85907338	85907763	100	+	.	Parent=FBgn0037541.1.mrna1;Target=FBgn0037541.1 78 503 +
Chr2	stalkie_big_nohaplotig	exon	85907847	85907994	100	+	.	Parent=FBgn0037541.1.mrna1;Target=FBgn0037541.1 504 651 +
Chr2	stalkie_big_nohaplotig	exon	85908069	85909546	99	+	.	Parent=FBgn0037541.1.mrna1;Target=FBgn0037541.1 652 2129 +
Chr2	stalkie_big_nohaplotig	exon	85909607	85909880	100	+	.	Parent=FBgn0037541.1.mrna1;Target=FBgn0037541.1 2130 2403 +
Chr2	stalkie_big_nohaplotig	exon	85913379	85913411	100	+	.	Parent=FBgn0037541.1.mrna1;Target=FBgn0037541.1 2404 2436 +
Chr2	stalkie_big_nohaplotig	exon	85913803	85914675	99	+	.	Parent=FBgn0037541.1.mrna1;Target=FBgn0037541.1 2437 3309 +
Chr2	stalkie_big_nohaplotig	exon	85914735	85915697	99	+	.	Parent=FBgn0037541.1.mrna1;Target=FBgn0037541.1 3310 4272 +
Chr2	stalkie_big_nohaplotig	exon	85916327	85917381	99	+	.	Parent=FBgn0037541.1.mrna1;Target=FBgn0037541.1 4273 5328 +
Chr2	stalkie_big_nohaplotig	CDS	85899377	85899453	.	+	0	Parent=FBgn0037541.1.mrna1;Target=FBgn0037541.1 1 77 +
Chr2	stalkie_big_nohaplotig	CDS	85907338	85907763	.	+	1	Parent=FBgn0037541.1.mrna1;Target=FBgn0037541.1 78 503 +
Chr2	stalkie_big_nohaplotig	CDS	85907847	85907994	.	+	1	Parent=FBgn0037541.1.mrna1;Target=FBgn0037541.1 504 651 +
Chr2	stalkie_big_nohaplotig	CDS	85908069	85909546	.	+	0	Parent=FBgn0037541.1.mrna1;Target=FBgn0037541.1 652 2129 +
Chr2	stalkie_big_nohaplotig	CDS	85909607	85909880	.	+	1	Parent=FBgn0037541.1.mrna1;Target=FBgn0037541.1 2130 2403 +
Chr2	stalkie_big_nohaplotig	CDS	85913379	85913411	.	+	0	Parent=FBgn0037541.1.mrna1;Target=FBgn0037541.1 2404 2436 +
Chr2	stalkie_big_nohaplotig	CDS	85913803	85914675	.	+	0	Parent=FBgn0037541.1.mrna1;Target=FBgn0037541.1 2437 3309 +
Chr2	stalkie_big_nohaplotig	CDS	85914735	85915697	.	+	0	Parent=FBgn0037541.1.mrna1;Target=FBgn0037541.1 3310 4272 +
Chr2	stalkie_big_nohaplotig	CDS	85916327	85917381	.	+	0	Parent=FBgn0037541.1.mrna1;Target=FBgn0037541.1 4273 5328 +
Chr2	gffcl	locus	85923921	85925150	.	+	.	ID=RLOC_00019193;geneIDs=comp151969_c0_seq1.path1;transcripts=comp151969_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85923921	85925150	.	+	.	ID=comp151969_c0_seq1.mrna1;geneID=comp151969_c0_seq1.path1;Name=comp151969_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1227;mismatches=3;indels=0;unknowns=0;Target=comp151969_c0_seq1 1230 1 .;CDS_Target=comp151969_c0_seq1 215 3 .;locus=RLOC_00019193
Chr2	stalkie_big_nohaplotig	exon	85923921	85925150	99	+	.	Parent=comp151969_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85923923	85924135	.	+	0	Parent=comp151969_c0_seq1.mrna1
Chr2	gffcl	locus	85925487	85925970	.	+	.	ID=RLOC_00019194;geneIDs=comp141636_c0_seq1.path1;transcripts=comp141636_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85925487	85925970	.	+	.	ID=comp141636_c0_seq1.mrna1;geneID=comp141636_c0_seq1.path1;Name=comp141636_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.6;matches=478;mismatches=6;indels=32;unknowns=0;Target=comp141636_c0_seq1 516 1 .;CDS_Target=comp141636_c0_seq1 100 2 .;locus=RLOC_00019194
Chr2	stalkie_big_nohaplotig	exon	85925487	85925970	92	+	.	Parent=comp141636_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85925488	85925585	.	+	0	Parent=comp141636_c0_seq1.mrna1
Chr2	gffcl	locus	85927487	85928266	.	+	.	ID=RLOC_00019195;geneIDs=comp154727_c2_seq1.path1;transcripts=comp154727_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85927487	85928266	.	+	.	ID=comp154727_c2_seq1.mrna1;geneID=comp154727_c2_seq1.path1;Name=comp154727_c2_seq1;Dir=indeterminatecoverage=100.0;identity=96.2;matches=750;mismatches=30;indels=0;unknowns=0;Target=comp154727_c2_seq1 780 1 .;CDS_Target=comp154727_c2_seq1 537 232 .;locus=RLOC_00019195
Chr2	stalkie_big_nohaplotig	exon	85927487	85928266	96	+	.	Parent=comp154727_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85927718	85928023	.	+	0	Parent=comp154727_c2_seq1.mrna1
Chr2	gffcl	locus	85937821	85939983	.	+	.	ID=RLOC_00019196;geneIDs=FBgn0037540.2.path1;transcripts=FBgn0037540.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85937821	85939983	.	+	.	ID=FBgn0037540.2.mrna1;geneID=FBgn0037540.2.path1;Name=FBgn0037540.2;Dir=sensecoverage=100.0;identity=99.9;matches=2047;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019196
Chr2	stalkie_big_nohaplotig	exon	85937821	85938288	99	+	.	Parent=FBgn0037540.2.mrna1;Target=FBgn0037540.2 1 468 +
Chr2	stalkie_big_nohaplotig	exon	85938340	85938886	99	+	.	Parent=FBgn0037540.2.mrna1;Target=FBgn0037540.2 469 1015 +
Chr2	stalkie_big_nohaplotig	exon	85938950	85939983	100	+	.	Parent=FBgn0037540.2.mrna1;Target=FBgn0037540.2 1016 2049 +
Chr2	stalkie_big_nohaplotig	CDS	85937821	85938288	.	+	0	Parent=FBgn0037540.2.mrna1;Target=FBgn0037540.2 1 468 +
Chr2	stalkie_big_nohaplotig	CDS	85938340	85938886	.	+	0	Parent=FBgn0037540.2.mrna1;Target=FBgn0037540.2 469 1015 +
Chr2	stalkie_big_nohaplotig	CDS	85938950	85939983	.	+	2	Parent=FBgn0037540.2.mrna1;Target=FBgn0037540.2 1016 2049 +
Chr2	gffcl	locus	85944572	85946758	.	+	.	ID=RLOC_00019197;geneIDs=FBgn0037539.path1;transcripts=FBgn0037539.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85944572	85946758	.	+	.	ID=FBgn0037539.mrna1;geneID=FBgn0037539.path1;Name=FBgn0037539;Dir=sensecoverage=100.0;identity=99.8;matches=647;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019197
Chr2	stalkie_big_nohaplotig	exon	85944572	85944944	99	+	.	Parent=FBgn0037539.mrna1;Target=FBgn0037539 1 373 +
Chr2	stalkie_big_nohaplotig	exon	85946429	85946580	100	+	.	Parent=FBgn0037539.mrna1;Target=FBgn0037539 374 525 +
Chr2	stalkie_big_nohaplotig	exon	85946636	85946758	100	+	.	Parent=FBgn0037539.mrna1;Target=FBgn0037539 526 648 +
Chr2	stalkie_big_nohaplotig	CDS	85944572	85944944	.	+	0	Parent=FBgn0037539.mrna1;Target=FBgn0037539 1 373 +
Chr2	stalkie_big_nohaplotig	CDS	85946429	85946580	.	+	2	Parent=FBgn0037539.mrna1;Target=FBgn0037539 374 525 +
Chr2	stalkie_big_nohaplotig	CDS	85946636	85946758	.	+	0	Parent=FBgn0037539.mrna1;Target=FBgn0037539 526 648 +
Chr2	gffcl	locus	85947424	85948751	.	-	.	ID=RLOC_00019198;geneIDs=FBgn0037538.1.path1;transcripts=FBgn0037538.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85947424	85948751	.	-	.	ID=FBgn0037538.1.mrna1;geneID=FBgn0037538.1.path1;Name=FBgn0037538.1;Dir=sensecoverage=100.0;identity=99.5;matches=1096;mismatches=5;indels=0;unknowns=0;locus=RLOC_00019198
Chr2	stalkie_big_nohaplotig	exon	85947424	85947947	100	-	.	Parent=FBgn0037538.1.mrna1;Target=FBgn0037538.1 578 1101 +
Chr2	stalkie_big_nohaplotig	exon	85948084	85948509	99	-	.	Parent=FBgn0037538.1.mrna1;Target=FBgn0037538.1 152 577 +
Chr2	stalkie_big_nohaplotig	exon	85948601	85948751	98	-	.	Parent=FBgn0037538.1.mrna1;Target=FBgn0037538.1 1 151 +
Chr2	stalkie_big_nohaplotig	CDS	85947424	85947947	.	-	2	Parent=FBgn0037538.1.mrna1;Target=FBgn0037538.1 578 1101 +
Chr2	stalkie_big_nohaplotig	CDS	85948084	85948509	.	-	2	Parent=FBgn0037538.1.mrna1;Target=FBgn0037538.1 152 577 +
Chr2	stalkie_big_nohaplotig	CDS	85948601	85948751	.	-	0	Parent=FBgn0037538.1.mrna1;Target=FBgn0037538.1 1 151 +
Chr2	stalkie_big_nohaplotig	mRNA	85950324	85950815	.	+	.	ID=FBgn0040524.1.mrna1;geneID=FBgn0040524.1.path1;Name=FBgn0040524.1;Dir=sensecoverage=100.0;identity=100.0;matches=291;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019199
Chr2	stalkie_big_nohaplotig	exon	85950324	85950375	100	+	.	Parent=FBgn0040524.1.mrna1;Target=FBgn0040524.1 1 52 +
Chr2	stalkie_big_nohaplotig	exon	85950440	85950456	100	+	.	Parent=FBgn0040524.1.mrna1;Target=FBgn0040524.1 53 69 +
Chr2	stalkie_big_nohaplotig	exon	85950521	85950630	100	+	.	Parent=FBgn0040524.1.mrna1;Target=FBgn0040524.1 70 179 +
Chr2	stalkie_big_nohaplotig	exon	85950704	85950815	100	+	.	Parent=FBgn0040524.1.mrna1;Target=FBgn0040524.1 180 291 +
Chr2	stalkie_big_nohaplotig	CDS	85950324	85950375	.	+	0	Parent=FBgn0040524.1.mrna1;Target=FBgn0040524.1 1 52 +
Chr2	stalkie_big_nohaplotig	CDS	85950440	85950456	.	+	2	Parent=FBgn0040524.1.mrna1;Target=FBgn0040524.1 53 69 +
Chr2	stalkie_big_nohaplotig	CDS	85950521	85950630	.	+	0	Parent=FBgn0040524.1.mrna1;Target=FBgn0040524.1 70 179 +
Chr2	stalkie_big_nohaplotig	CDS	85950704	85950815	.	+	1	Parent=FBgn0040524.1.mrna1;Target=FBgn0040524.1 180 291 +
Chr2	stalkie_big_nohaplotig	mRNA	85964963	85967278	.	-	.	ID=comp158909_c0_seq1.mrna1;geneID=comp158909_c0_seq1.path1;Name=comp158909_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=2314;mismatches=2;indels=2;unknowns=0;Target=comp158909_c0_seq1 2318 1 .;CDS_Target=comp158909_c0_seq1 686 573 .;locus=RLOC_00019199
Chr2	stalkie_big_nohaplotig	exon	85964963	85967278	99	-	.	Parent=comp158909_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85966595	85966708	.	-	0	Parent=comp158909_c0_seq1.mrna1
Chr2	gffcl	locus	85951479	85952107	.	-	.	ID=RLOC_00019200;geneIDs=comp1586652_c0_seq1.path1;transcripts=comp1586652_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85951479	85952107	.	-	.	ID=comp1586652_c0_seq1.mrna1;geneID=comp1586652_c0_seq1.path1;Name=comp1586652_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=628;mismatches=1;indels=0;unknowns=0;Target=comp1586652_c0_seq1 629 1 .;CDS_Target=comp1586652_c0_seq1 546 274 .;locus=RLOC_00019200
Chr2	stalkie_big_nohaplotig	exon	85951479	85952107	99	-	.	Parent=comp1586652_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85951562	85951834	.	-	0	Parent=comp1586652_c0_seq1.mrna1
Chr2	gffcl	locus	85953572	85954663	.	+	.	ID=RLOC_00019201;geneIDs=comp142393_c0_seq1.path1;transcripts=comp142393_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85953572	85954663	.	+	.	ID=comp142393_c0_seq1.mrna1;geneID=comp142393_c0_seq1.path1;Name=comp142393_c0_seq1;Dir=indeterminatecoverage=96.9;identity=99.5;matches=1088;mismatches=3;indels=2;unknowns=0;Target=comp142393_c0_seq1 1092 1 .;CDS_Target=comp142393_c0_seq1 103 2 .;locus=RLOC_00019201
Chr2	stalkie_big_nohaplotig	exon	85953572	85954663	99	+	.	Parent=comp142393_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85953573	85953674	.	+	0	Parent=comp142393_c0_seq1.mrna1
Chr2	gffcl	locus	85969912	85971068	.	.	.	ID=RLOC_00019202;geneIDs=comp115187_c0_seq1.path1,comp135061_c0_seq1.path1;transcripts=comp135061_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85970457	85971068	.	-	.	ID=comp135061_c0_seq1.mrna1;geneID=comp135061_c0_seq1.path1;Name=comp135061_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=611;mismatches=0;indels=1;unknowns=0;Target=comp135061_c0_seq1 612 2 .;CDS_Target=comp135061_c0_seq1 100 2 .;locus=RLOC_00019202
Chr2	stalkie_big_nohaplotig	exon	85970457	85971068	99	-	.	Parent=comp135061_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85970970	85971068	.	-	0	Parent=comp135061_c0_seq1.mrna1
Chr2	gffcl	locus	85972327	85973025	.	-	.	ID=RLOC_00019203;geneIDs=comp116377_c0_seq1.path1;transcripts=comp116377_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85972327	85973025	.	-	.	ID=comp116377_c0_seq1.mrna1;geneID=comp116377_c0_seq1.path1;Name=comp116377_c0_seq1;Dir=indeterminatecoverage=98.3;identity=100.0;matches=699;mismatches=0;indels=0;unknowns=0;Target=comp116377_c0_seq1 711 13 .;CDS_Target=comp116377_c0_seq1 102 13 .;locus=RLOC_00019203
Chr2	stalkie_big_nohaplotig	exon	85972327	85973025	100	-	.	Parent=comp116377_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85972936	85973025	.	-	0	Parent=comp116377_c0_seq1.mrna1
Chr2	gffcl	locus	85974375	85975359	.	+	.	ID=RLOC_00019204;geneIDs=comp152739_c0_seq1.path1;transcripts=comp152739_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	85974375	85975359	.	+	.	ID=comp152739_c0_seq1.mrna1;geneID=comp152739_c0_seq1.path1;Name=comp152739_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.9;matches=984;mismatches=1;indels=0;unknowns=0;Target=comp152739_c0_seq1 995 11 .;CDS_Target=comp152739_c0_seq1 64 11 .;locus=RLOC_00019204
Chr2	stalkie_big_nohaplotig	exon	85974375	85975359	99	+	.	Parent=comp152739_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	85974375	85974428	.	+	0	Parent=comp152739_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86033696	86224754	.	-	.	ID=comp135012_c0_seq1.mrna1;geneID=comp135012_c0_seq1.path1;Name=comp135012_c0_seq1;Dir=sensecoverage=100.0;identity=98.9;matches=468;mismatches=1;indels=4;unknowns=0;Target=comp135012_c0_seq1 2 124 +;locus=RLOC_00019205
Chr2	stalkie_big_nohaplotig	exon	86033696	86033998	98	-	.	Parent=comp135012_c0_seq1.mrna1;Target=comp135012_c0_seq1 171 469 +
Chr2	stalkie_big_nohaplotig	exon	86224585	86224754	100	-	.	Parent=comp135012_c0_seq1.mrna1;Target=comp135012_c0_seq1 1 170 +
Chr2	stalkie_big_nohaplotig	CDS	86224631	86224753	.	-	0	Parent=comp135012_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86224743	86227676	.	-	.	ID=comp116234_c0_seq1.mrna1;geneID=comp116234_c0_seq1.path1;Name=comp116234_c0_seq1;Dir=sensecoverage=90.3;identity=99.6;matches=522;mismatches=1;indels=1;unknowns=0;Target=comp116234_c0_seq1 256 303 +;locus=RLOC_00019205
Chr2	stalkie_big_nohaplotig	exon	86224743	86224907	99	-	.	Parent=comp116234_c0_seq1.mrna1;Target=comp116234_c0_seq1 384 548 +
Chr2	stalkie_big_nohaplotig	exon	86227319	86227676	99	-	.	Parent=comp116234_c0_seq1.mrna1;Target=comp116234_c0_seq1 25 383 +
Chr2	stalkie_big_nohaplotig	CDS	86227399	86227446	.	-	0	Parent=comp116234_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87857976	87888826	.	-	.	ID=FBgn0037906.3.mrna1;geneID=FBgn0037906.3.path1;Name=FBgn0037906.3;Dir=sensecoverage=100.0;identity=100.0;matches=648;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019205
Chr2	stalkie_big_nohaplotig	exon	87857976	87858187	100	-	.	Parent=FBgn0037906.3.mrna1;Target=FBgn0037906.3 437 648 +
Chr2	stalkie_big_nohaplotig	exon	87858263	87858613	100	-	.	Parent=FBgn0037906.3.mrna1;Target=FBgn0037906.3 86 436 +
Chr2	stalkie_big_nohaplotig	exon	87888742	87888826	100	-	.	Parent=FBgn0037906.3.mrna1;Target=FBgn0037906.3 1 85 +
Chr2	stalkie_big_nohaplotig	CDS	87857976	87858187	.	-	2	Parent=FBgn0037906.3.mrna1;Target=FBgn0037906.3 437 648 +
Chr2	stalkie_big_nohaplotig	CDS	87858263	87858613	.	-	2	Parent=FBgn0037906.3.mrna1;Target=FBgn0037906.3 86 436 +
Chr2	stalkie_big_nohaplotig	CDS	87888742	87888826	.	-	0	Parent=FBgn0037906.3.mrna1;Target=FBgn0037906.3 1 85 +
Chr2	gffcl	locus	86076730	86077733	.	-	.	ID=RLOC_00019206;geneIDs=comp152761_c0_seq1.path1;transcripts=comp152761_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86076730	86077733	.	-	.	ID=comp152761_c0_seq1.mrna1;geneID=comp152761_c0_seq1.path1;Name=comp152761_c0_seq1;Dir=sensecoverage=100.0;identity=99.1;matches=912;mismatches=2;indels=6;unknowns=0;Target=comp152761_c0_seq1 3 146 +;locus=RLOC_00019206
Chr2	stalkie_big_nohaplotig	exon	86076730	86077337	99	-	.	Parent=comp152761_c0_seq1.mrna1;Target=comp152761_c0_seq1 313 920 +
Chr2	stalkie_big_nohaplotig	exon	86077428	86077733	98	-	.	Parent=comp152761_c0_seq1.mrna1;Target=comp152761_c0_seq1 1 312 +
Chr2	stalkie_big_nohaplotig	CDS	86077594	86077731	.	-	0	Parent=comp152761_c0_seq1.mrna1
Chr2	gffcl	locus	86227772	86228042	.	+	.	ID=RLOC_00019209;geneIDs=comp1296208_c0_seq1.path1;transcripts=comp1296208_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86227772	86228042	.	+	.	ID=comp1296208_c0_seq1.mrna1;geneID=comp1296208_c0_seq1.path1;Name=comp1296208_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=268;mismatches=3;indels=0;unknowns=0;Target=comp1296208_c0_seq1 271 1 .;CDS_Target=comp1296208_c0_seq1 105 1 .;locus=RLOC_00019209
Chr2	stalkie_big_nohaplotig	exon	86227772	86228042	98	+	.	Parent=comp1296208_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	86227772	86227876	.	+	0	Parent=comp1296208_c0_seq1.mrna1
Chr2	gffcl	locus	86402807	86405330	.	-	.	ID=RLOC_00019210;geneIDs=comp162708_c0_seq1.path1;transcripts=comp162708_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86402807	86405330	.	-	.	ID=comp162708_c0_seq1.mrna1;geneID=comp162708_c0_seq1.path1;Name=comp162708_c0_seq1;Dir=antisensecoverage=98.7;identity=95.6;matches=1239;mismatches=47;indels=10;unknowns=0;locus=RLOC_00019210
Chr2	stalkie_big_nohaplotig	exon	86402807	86403090	94	-	.	Parent=comp162708_c0_seq1.mrna1;Target=comp162708_c0_seq1 1 284 -
Chr2	stalkie_big_nohaplotig	exon	86403148	86403338	92	-	.	Parent=comp162708_c0_seq1.mrna1;Target=comp162708_c0_seq1 285 466 -
Chr2	stalkie_big_nohaplotig	exon	86403387	86403490	98	-	.	Parent=comp162708_c0_seq1.mrna1;Target=comp162708_c0_seq1 467 570 -
Chr2	stalkie_big_nohaplotig	exon	86404480	86404791	97	-	.	Parent=comp162708_c0_seq1.mrna1;Target=comp162708_c0_seq1 571 882 -
Chr2	stalkie_big_nohaplotig	exon	86404927	86405330	96	-	.	Parent=comp162708_c0_seq1.mrna1;Target=comp162708_c0_seq1 883 1287 -
Chr2	stalkie_big_nohaplotig	CDS	86404612	86404791	.	-	0	Parent=comp162708_c0_seq1.mrna1;Target=comp162708_c0_seq1 703 882 .
Chr2	stalkie_big_nohaplotig	CDS	86404927	86405133	.	-	0	Parent=comp162708_c0_seq1.mrna1;Target=comp162708_c0_seq1 883 1089 .
Chr2	gffcl	locus	86410386	86411956	.	-	.	ID=RLOC_00019211;geneIDs=comp160400_c0_seq1.path1;transcripts=comp160400_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86410386	86411956	.	-	.	ID=comp160400_c0_seq1.mrna1;geneID=comp160400_c0_seq1.path1;Name=comp160400_c0_seq1;Dir=antisensecoverage=98.9;identity=94.4;matches=1343;mismatches=69;indels=11;unknowns=0;Target=comp160400_c0_seq1 333 433 .;locus=RLOC_00019211
Chr2	stalkie_big_nohaplotig	exon	86410386	86410687	90	-	.	Parent=comp160400_c0_seq1.mrna1;Target=comp160400_c0_seq1 1 303 -
Chr2	stalkie_big_nohaplotig	exon	86410733	86411359	94	-	.	Parent=comp160400_c0_seq1.mrna1;Target=comp160400_c0_seq1 333 969 -
Chr2	stalkie_big_nohaplotig	exon	86411474	86411956	96	-	.	Parent=comp160400_c0_seq1.mrna1;Target=comp160400_c0_seq1 970 1452 -
Chr2	stalkie_big_nohaplotig	CDS	86410733	86410833	.	-	0	Parent=comp160400_c0_seq1.mrna1
Chr2	gffcl	locus	86436863	86437130	.	-	.	ID=RLOC_00019212;geneIDs=comp78392_c0_seq1.path1;transcripts=comp78392_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86436863	86437130	.	-	.	ID=comp78392_c0_seq1.mrna1;geneID=comp78392_c0_seq1.path1;Name=comp78392_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.0;matches=260;mismatches=2;indels=6;unknowns=0;Target=comp78392_c0_seq1 262 1 .;CDS_Target=comp78392_c0_seq1 79 2 .;locus=RLOC_00019212
Chr2	stalkie_big_nohaplotig	exon	86436863	86437130	97	-	.	Parent=comp78392_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	86437046	86437129	.	-	0	Parent=comp78392_c0_seq1.mrna1
Chr2	gffcl	locus	86437303	86438760	.	.	.	ID=RLOC_00019213;geneIDs=comp156023_c0_seq1.path1,comp156980_c0_seq1.path1;transcripts=comp156023_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86437303	86438231	.	+	.	ID=comp156023_c0_seq1.mrna1;geneID=comp156023_c0_seq1.path1;Name=comp156023_c0_seq1;Dir=indeterminatecoverage=98.7;identity=97.0;matches=903;mismatches=26;indels=2;unknowns=0;Target=comp156023_c0_seq1 931 1 .;CDS_Target=comp156023_c0_seq1 73 2 .;locus=RLOC_00019213
Chr2	stalkie_big_nohaplotig	exon	86437303	86438231	96	+	.	Parent=comp156023_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	86437304	86437375	.	+	0	Parent=comp156023_c0_seq1.mrna1
Chr2	gffcl	locus	86438787	86439720	.	-	.	ID=RLOC_00019214;geneIDs=comp159874_c0_seq1.path1;transcripts=comp159874_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86438787	86439720	.	-	.	ID=comp159874_c0_seq1.mrna1;geneID=comp159874_c0_seq1.path1;Name=comp159874_c0_seq1;Dir=indeterminatecoverage=99.8;identity=96.4;matches=902;mismatches=32;indels=2;unknowns=0;Target=comp159874_c0_seq1 936 1 .;CDS_Target=comp159874_c0_seq1 542 330 .;locus=RLOC_00019214
Chr2	stalkie_big_nohaplotig	exon	86438787	86439720	96	-	.	Parent=comp159874_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	86439179	86439391	.	-	0	Parent=comp159874_c0_seq1.mrna1
Chr2	gffcl	locus	86440975	86441910	.	+	.	ID=RLOC_00019215;geneIDs=comp156038_c0_seq1.path1;transcripts=comp156038_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86440975	86441910	.	+	.	ID=comp156038_c0_seq1.mrna1;geneID=comp156038_c0_seq1.path1;Name=comp156038_c0_seq1;Dir=indeterminatecoverage=99.7;identity=93.6;matches=905;mismatches=15;indels=47;unknowns=0;Target=comp156038_c0_seq1 954 4 .;CDS_Target=comp156038_c0_seq1 367 35 .;locus=RLOC_00019215
Chr2	stalkie_big_nohaplotig	exon	86440975	86441910	93	+	.	Parent=comp156038_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	86441006	86441322	.	+	0	Parent=comp156038_c0_seq1.mrna1
Chr2	gffcl	locus	86442498	86443228	.	+	.	ID=RLOC_00019216;geneIDs=comp151043_c0_seq1.path1;transcripts=comp151043_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86442498	86443228	.	+	.	ID=comp151043_c0_seq1.mrna1;geneID=comp151043_c0_seq1.path1;Name=comp151043_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=730;mismatches=1;indels=0;unknowns=0;Target=comp151043_c0_seq1 731 1 .;CDS_Target=comp151043_c0_seq1 227 87 .;locus=RLOC_00019216
Chr2	stalkie_big_nohaplotig	exon	86442498	86443228	99	+	.	Parent=comp151043_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	86442584	86442724	.	+	0	Parent=comp151043_c0_seq1.mrna1
Chr2	gffcl	locus	86474641	86476046	.	+	.	ID=RLOC_00019217;geneIDs=FBgn0037884.1.path1;transcripts=FBgn0037884.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86474641	86476046	.	+	.	ID=FBgn0037884.1.mrna1;geneID=FBgn0037884.1.path1;Name=FBgn0037884.1;Dir=sensecoverage=100.0;identity=100.0;matches=1053;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019217
Chr2	stalkie_big_nohaplotig	exon	86474641	86474734	100	+	.	Parent=FBgn0037884.1.mrna1;Target=FBgn0037884.1 1 94 +
Chr2	stalkie_big_nohaplotig	exon	86474785	86474928	100	+	.	Parent=FBgn0037884.1.mrna1;Target=FBgn0037884.1 95 238 +
Chr2	stalkie_big_nohaplotig	exon	86474978	86475473	100	+	.	Parent=FBgn0037884.1.mrna1;Target=FBgn0037884.1 239 734 +
Chr2	stalkie_big_nohaplotig	exon	86475618	86475783	100	+	.	Parent=FBgn0037884.1.mrna1;Target=FBgn0037884.1 735 900 +
Chr2	stalkie_big_nohaplotig	exon	86475839	86475946	100	+	.	Parent=FBgn0037884.1.mrna1;Target=FBgn0037884.1 901 1008 +
Chr2	stalkie_big_nohaplotig	exon	86476002	86476046	100	+	.	Parent=FBgn0037884.1.mrna1;Target=FBgn0037884.1 1009 1053 +
Chr2	stalkie_big_nohaplotig	CDS	86474641	86474734	.	+	0	Parent=FBgn0037884.1.mrna1;Target=FBgn0037884.1 1 94 +
Chr2	stalkie_big_nohaplotig	CDS	86474785	86474928	.	+	2	Parent=FBgn0037884.1.mrna1;Target=FBgn0037884.1 95 238 +
Chr2	stalkie_big_nohaplotig	CDS	86474978	86475473	.	+	2	Parent=FBgn0037884.1.mrna1;Target=FBgn0037884.1 239 734 +
Chr2	stalkie_big_nohaplotig	CDS	86475618	86475783	.	+	1	Parent=FBgn0037884.1.mrna1;Target=FBgn0037884.1 735 900 +
Chr2	stalkie_big_nohaplotig	CDS	86475839	86475946	.	+	0	Parent=FBgn0037884.1.mrna1;Target=FBgn0037884.1 901 1008 +
Chr2	stalkie_big_nohaplotig	CDS	86476002	86476046	.	+	0	Parent=FBgn0037884.1.mrna1;Target=FBgn0037884.1 1009 1053 +
Chr2	gffcl	locus	86531921	86533980	.	+	.	ID=RLOC_00019218;geneIDs=ORF341.path1;transcripts=ORF341.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86531921	86533980	.	+	.	ID=ORF341.mrna1;geneID=ORF341.path1;Name=ORF341;Dir=sensecoverage=100.0;identity=98.3;matches=1953;mismatches=21;indels=12;unknowns=0;locus=RLOC_00019218
Chr2	stalkie_big_nohaplotig	exon	86531921	86532499	100	+	.	Parent=ORF341.mrna1;Target=ORF341 1 579 +
Chr2	stalkie_big_nohaplotig	exon	86532586	86533980	97	+	.	Parent=ORF341.mrna1;Target=ORF341 580 1986 +
Chr2	stalkie_big_nohaplotig	CDS	86531921	86532499	.	+	0	Parent=ORF341.mrna1;Target=ORF341 1 579 +
Chr2	stalkie_big_nohaplotig	CDS	86532586	86533980	.	+	0	Parent=ORF341.mrna1;Target=ORF341 580 1986 +
Chr2	gffcl	locus	86569869	86570913	.	-	.	ID=RLOC_00019219;geneIDs=comp146692_c0_seq1.path1;transcripts=comp146692_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86569869	86570913	.	-	.	ID=comp146692_c0_seq1.mrna1;geneID=comp146692_c0_seq1.path1;Name=comp146692_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.3;matches=778;mismatches=35;indels=30;unknowns=0;Target=comp146692_c0_seq1 738 619 .;locus=RLOC_00019219
Chr2	stalkie_big_nohaplotig	exon	86569869	86570393	96	-	.	Parent=comp146692_c0_seq1.mrna1;Target=comp146692_c0_seq1 843 316 .
Chr2	stalkie_big_nohaplotig	exon	86570626	86570913	85	-	.	Parent=comp146692_c0_seq1.mrna1;Target=comp146692_c0_seq1 315 1 .
Chr2	stalkie_big_nohaplotig	CDS	86569974	86570090	.	-	0	Parent=comp146692_c0_seq1.mrna1
Chr2	gffcl	locus	86625133	86626299	.	+	.	ID=RLOC_00019220;geneIDs=FBgn0050280.2.path1;transcripts=FBgn0050280.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86625133	86626299	.	+	.	ID=FBgn0050280.2.mrna1;geneID=FBgn0050280.2.path1;Name=FBgn0050280.2;Dir=sensecoverage=100.0;identity=100.0;matches=933;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019220
Chr2	stalkie_big_nohaplotig	exon	86625133	86625201	100	+	.	Parent=FBgn0050280.2.mrna1;Target=FBgn0050280.2 1 69 +
Chr2	stalkie_big_nohaplotig	exon	86625262	86625371	100	+	.	Parent=FBgn0050280.2.mrna1;Target=FBgn0050280.2 70 179 +
Chr2	stalkie_big_nohaplotig	exon	86625425	86626033	100	+	.	Parent=FBgn0050280.2.mrna1;Target=FBgn0050280.2 180 788 +
Chr2	stalkie_big_nohaplotig	exon	86626080	86626205	100	+	.	Parent=FBgn0050280.2.mrna1;Target=FBgn0050280.2 789 914 +
Chr2	stalkie_big_nohaplotig	exon	86626281	86626299	100	+	.	Parent=FBgn0050280.2.mrna1;Target=FBgn0050280.2 915 933 +
Chr2	stalkie_big_nohaplotig	CDS	86625133	86625201	.	+	0	Parent=FBgn0050280.2.mrna1;Target=FBgn0050280.2 1 69 +
Chr2	stalkie_big_nohaplotig	CDS	86625262	86625371	.	+	0	Parent=FBgn0050280.2.mrna1;Target=FBgn0050280.2 70 179 +
Chr2	stalkie_big_nohaplotig	CDS	86625425	86626033	.	+	1	Parent=FBgn0050280.2.mrna1;Target=FBgn0050280.2 180 788 +
Chr2	stalkie_big_nohaplotig	CDS	86626080	86626205	.	+	1	Parent=FBgn0050280.2.mrna1;Target=FBgn0050280.2 789 914 +
Chr2	stalkie_big_nohaplotig	CDS	86626281	86626299	.	+	1	Parent=FBgn0050280.2.mrna1;Target=FBgn0050280.2 915 933 +
Chr2	gffcl	locus	86650270	86650744	.	+	.	ID=RLOC_00019221;geneIDs=comp1196_c0_seq1.path1;transcripts=comp1196_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86650270	86650744	.	+	.	ID=comp1196_c0_seq1.mrna1;geneID=comp1196_c0_seq1.path1;Name=comp1196_c0_seq1;Dir=indeterminatecoverage=99.0;identity=97.9;matches=472;mismatches=3;indels=7;unknowns=0;Target=comp1196_c0_seq1 482 1 .;CDS_Target=comp1196_c0_seq1 91 8 .;locus=RLOC_00019221
Chr2	stalkie_big_nohaplotig	exon	86650270	86650744	97	+	.	Parent=comp1196_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	86650277	86650360	.	+	0	Parent=comp1196_c0_seq1.mrna1
Chr2	gffcl	locus	86655981	86657917	.	+	.	ID=RLOC_00019222;geneIDs=FBgn0037540.1.path1;transcripts=FBgn0037540.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86655981	86657917	.	+	.	ID=FBgn0037540.1.mrna1;geneID=FBgn0037540.1.path1;Name=FBgn0037540.1;Dir=sensecoverage=100.0;identity=95.1;matches=1737;mismatches=84;indels=6;unknowns=0;locus=RLOC_00019222
Chr2	stalkie_big_nohaplotig	exon	86655981	86656586	89	+	.	Parent=FBgn0037540.1.mrna1;Target=FBgn0037540.1 1 600 +
Chr2	stalkie_big_nohaplotig	exon	86656645	86657191	96	+	.	Parent=FBgn0037540.1.mrna1;Target=FBgn0037540.1 601 1147 +
Chr2	stalkie_big_nohaplotig	exon	86657244	86657917	98	+	.	Parent=FBgn0037540.1.mrna1;Target=FBgn0037540.1 1148 1821 +
Chr2	stalkie_big_nohaplotig	CDS	86655981	86656586	.	+	0	Parent=FBgn0037540.1.mrna1;Target=FBgn0037540.1 1 600 +
Chr2	stalkie_big_nohaplotig	CDS	86656645	86657191	.	+	0	Parent=FBgn0037540.1.mrna1;Target=FBgn0037540.1 601 1147 +
Chr2	stalkie_big_nohaplotig	CDS	86657244	86657917	.	+	2	Parent=FBgn0037540.1.mrna1;Target=FBgn0037540.1 1148 1821 +
Chr2	gffcl	locus	86674039	86675000	.	-	.	ID=RLOC_00019223;geneIDs=comp155322_c0_seq1.path1;transcripts=comp155322_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86674039	86675000	.	-	.	ID=comp155322_c0_seq1.mrna1;geneID=comp155322_c0_seq1.path1;Name=comp155322_c0_seq1;Dir=indeterminatecoverage=95.1;identity=95.5;matches=922;mismatches=38;indels=5;unknowns=0;Target=comp155322_c0_seq1 963 1 .;CDS_Target=comp155322_c0_seq1 314 225 .;locus=RLOC_00019223
Chr2	stalkie_big_nohaplotig	exon	86674039	86675000	95	-	.	Parent=comp155322_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	86674687	86674774	.	-	0	Parent=comp155322_c0_seq1.mrna1
Chr2	gffcl	locus	86678193	86679431	.	-	.	ID=RLOC_00019224;geneIDs=comp160844_c1_seq1.path1;transcripts=comp160844_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86678193	86679431	.	-	.	ID=comp160844_c1_seq1.mrna1;geneID=comp160844_c1_seq1.path1;Name=comp160844_c1_seq1;Dir=indeterminatecoverage=99.8;identity=94.0;matches=1165;mismatches=27;indels=47;unknowns=0;Target=comp160844_c1_seq1 1192 1 .;CDS_Target=comp160844_c1_seq1 877 728 .;locus=RLOC_00019224
Chr2	stalkie_big_nohaplotig	exon	86678193	86679431	94	-	.	Parent=comp160844_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	86678555	86678704	.	-	0	Parent=comp160844_c1_seq1.mrna1
Chr2	gffcl	locus	86689705	86691502	.	-	.	ID=RLOC_00019225;geneIDs=FBgn0039319.1.path1;transcripts=FBgn0039319.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86689705	86691502	.	-	.	ID=FBgn0039319.1.mrna1;geneID=FBgn0039319.1.path1;Name=FBgn0039319.1;Dir=sensecoverage=100.0;identity=99.4;matches=785;mismatches=5;indels=0;unknowns=5;locus=RLOC_00019225
Chr2	stalkie_big_nohaplotig	exon	86689705	86689883	98	-	.	Parent=FBgn0039319.1.mrna1;Target=FBgn0039319.1 617 795 +
Chr2	stalkie_big_nohaplotig	exon	86689992	86690520	99	-	.	Parent=FBgn0039319.1.mrna1;Target=FBgn0039319.1 88 616 +
Chr2	stalkie_big_nohaplotig	exon	86691416	86691502	100	-	.	Parent=FBgn0039319.1.mrna1;Target=FBgn0039319.1 1 87 +
Chr2	stalkie_big_nohaplotig	CDS	86689705	86689883	.	-	2	Parent=FBgn0039319.1.mrna1;Target=FBgn0039319.1 617 795 +
Chr2	stalkie_big_nohaplotig	CDS	86689992	86690520	.	-	0	Parent=FBgn0039319.1.mrna1;Target=FBgn0039319.1 88 616 +
Chr2	stalkie_big_nohaplotig	CDS	86691416	86691502	.	-	0	Parent=FBgn0039319.1.mrna1;Target=FBgn0039319.1 1 87 +
Chr2	gffcl	locus	86697245	86700159	.	-	.	ID=RLOC_00019226;geneIDs=FBgn0051436.2.path1;transcripts=FBgn0051436.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86697245	86700159	.	-	.	ID=FBgn0051436.2.mrna1;geneID=FBgn0051436.2.path1;Name=FBgn0051436.2;Dir=sensecoverage=100.0;identity=99.7;matches=1286;mismatches=4;indels=0;unknowns=0;locus=RLOC_00019226
Chr2	stalkie_big_nohaplotig	exon	86697245	86697447	100	-	.	Parent=FBgn0051436.2.mrna1;Target=FBgn0051436.2 1088 1290 +
Chr2	stalkie_big_nohaplotig	exon	86697558	86698086	99	-	.	Parent=FBgn0051436.2.mrna1;Target=FBgn0051436.2 559 1087 +
Chr2	stalkie_big_nohaplotig	exon	86699537	86699702	100	-	.	Parent=FBgn0051436.2.mrna1;Target=FBgn0051436.2 393 558 +
Chr2	stalkie_big_nohaplotig	exon	86699768	86700159	100	-	.	Parent=FBgn0051436.2.mrna1;Target=FBgn0051436.2 1 392 +
Chr2	stalkie_big_nohaplotig	CDS	86697245	86697447	.	-	2	Parent=FBgn0051436.2.mrna1;Target=FBgn0051436.2 1088 1290 +
Chr2	stalkie_big_nohaplotig	CDS	86697558	86698086	.	-	0	Parent=FBgn0051436.2.mrna1;Target=FBgn0051436.2 559 1087 +
Chr2	stalkie_big_nohaplotig	CDS	86699537	86699702	.	-	1	Parent=FBgn0051436.2.mrna1;Target=FBgn0051436.2 393 558 +
Chr2	stalkie_big_nohaplotig	CDS	86699768	86700159	.	-	0	Parent=FBgn0051436.2.mrna1;Target=FBgn0051436.2 1 392 +
Chr2	gffcl	locus	86723032	86725576	.	+	.	ID=RLOC_00019227;geneIDs=FBgn0051104.2.path1;transcripts=FBgn0051104.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86723032	86725576	.	+	.	ID=FBgn0051104.2.mrna1;geneID=FBgn0051104.2.path1;Name=FBgn0051104.2;Dir=sensecoverage=100.0;identity=99.7;matches=1253;mismatches=4;indels=0;unknowns=0;locus=RLOC_00019227
Chr2	stalkie_big_nohaplotig	exon	86723032	86723130	100	+	.	Parent=FBgn0051104.2.mrna1;Target=FBgn0051104.2 1 99 +
Chr2	stalkie_big_nohaplotig	exon	86723232	86723518	98	+	.	Parent=FBgn0051104.2.mrna1;Target=FBgn0051104.2 100 386 +
Chr2	stalkie_big_nohaplotig	exon	86724420	86724585	100	+	.	Parent=FBgn0051104.2.mrna1;Target=FBgn0051104.2 387 552 +
Chr2	stalkie_big_nohaplotig	exon	86724643	86724954	100	+	.	Parent=FBgn0051104.2.mrna1;Target=FBgn0051104.2 553 864 +
Chr2	stalkie_big_nohaplotig	exon	86725030	86725246	100	+	.	Parent=FBgn0051104.2.mrna1;Target=FBgn0051104.2 865 1081 +
Chr2	stalkie_big_nohaplotig	exon	86725401	86725576	99	+	.	Parent=FBgn0051104.2.mrna1;Target=FBgn0051104.2 1082 1257 +
Chr2	stalkie_big_nohaplotig	CDS	86723032	86723130	.	+	0	Parent=FBgn0051104.2.mrna1;Target=FBgn0051104.2 1 99 +
Chr2	stalkie_big_nohaplotig	CDS	86723232	86723518	.	+	0	Parent=FBgn0051104.2.mrna1;Target=FBgn0051104.2 100 386 +
Chr2	stalkie_big_nohaplotig	CDS	86724420	86724585	.	+	1	Parent=FBgn0051104.2.mrna1;Target=FBgn0051104.2 387 552 +
Chr2	stalkie_big_nohaplotig	CDS	86724643	86724954	.	+	0	Parent=FBgn0051104.2.mrna1;Target=FBgn0051104.2 553 864 +
Chr2	stalkie_big_nohaplotig	CDS	86725030	86725246	.	+	0	Parent=FBgn0051104.2.mrna1;Target=FBgn0051104.2 865 1081 +
Chr2	stalkie_big_nohaplotig	CDS	86725401	86725576	.	+	2	Parent=FBgn0051104.2.mrna1;Target=FBgn0051104.2 1082 1257 +
Chr2	gffcl	locus	86725881	86726147	.	-	.	ID=RLOC_00019228;geneIDs=comp148687_c0_seq1.path1;transcripts=comp148687_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86725881	86726147	.	-	.	ID=comp148687_c0_seq1.mrna1;geneID=comp148687_c0_seq1.path1;Name=comp148687_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=266;mismatches=1;indels=0;unknowns=0;Target=comp148687_c0_seq1 267 1 .;CDS_Target=comp148687_c0_seq1 231 1 .;locus=RLOC_00019228
Chr2	stalkie_big_nohaplotig	exon	86725881	86726147	99	-	.	Parent=comp148687_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	86725917	86726147	.	-	0	Parent=comp148687_c0_seq1.mrna1
Chr2	gffcl	locus	86729375	86730853	.	-	.	ID=RLOC_00019229;geneIDs=FBgn0039316.1.path1;transcripts=FBgn0039316.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86729375	86730853	.	-	.	ID=FBgn0039316.1.mrna1;geneID=FBgn0039316.1.path1;Name=FBgn0039316.1;Dir=sensecoverage=100.0;identity=99.9;matches=821;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019229
Chr2	stalkie_big_nohaplotig	exon	86729375	86729632	100	-	.	Parent=FBgn0039316.1.mrna1;Target=FBgn0039316.1 565 822 +
Chr2	stalkie_big_nohaplotig	exon	86729704	86729869	100	-	.	Parent=FBgn0039316.1.mrna1;Target=FBgn0039316.1 399 564 +
Chr2	stalkie_big_nohaplotig	exon	86730456	86730853	99	-	.	Parent=FBgn0039316.1.mrna1;Target=FBgn0039316.1 1 398 +
Chr2	stalkie_big_nohaplotig	CDS	86729375	86729632	.	-	0	Parent=FBgn0039316.1.mrna1;Target=FBgn0039316.1 565 822 +
Chr2	stalkie_big_nohaplotig	CDS	86729704	86729869	.	-	1	Parent=FBgn0039316.1.mrna1;Target=FBgn0039316.1 399 564 +
Chr2	stalkie_big_nohaplotig	CDS	86730456	86730853	.	-	0	Parent=FBgn0039316.1.mrna1;Target=FBgn0039316.1 1 398 +
Chr2	gffcl	locus	86740371	86742230	.	-	.	ID=RLOC_00019231;geneIDs=comp149611_c0_seq1.path1;transcripts=comp149611_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86740371	86742230	.	-	.	ID=comp149611_c0_seq1.mrna1;geneID=comp149611_c0_seq1.path1;Name=comp149611_c0_seq1;Dir=antisensecoverage=100.0;identity=98.5;matches=526;mismatches=8;indels=0;unknowns=0;locus=RLOC_00019231
Chr2	stalkie_big_nohaplotig	exon	86740371	86740516	97	-	.	Parent=comp149611_c0_seq1.mrna1;Target=comp149611_c0_seq1 1 146 -
Chr2	stalkie_big_nohaplotig	exon	86740576	86740741	96	-	.	Parent=comp149611_c0_seq1.mrna1;Target=comp149611_c0_seq1 147 312 -
Chr2	stalkie_big_nohaplotig	exon	86742009	86742230	100	-	.	Parent=comp149611_c0_seq1.mrna1;Target=comp149611_c0_seq1 313 534 -
Chr2	stalkie_big_nohaplotig	CDS	86740373	86740516	.	-	0	Parent=comp149611_c0_seq1.mrna1;Target=comp149611_c0_seq1 3 146 .
Chr2	stalkie_big_nohaplotig	CDS	86740576	86740741	.	-	1	Parent=comp149611_c0_seq1.mrna1;Target=comp149611_c0_seq1 147 312 .
Chr2	stalkie_big_nohaplotig	CDS	86742009	86742229	.	-	0	Parent=comp149611_c0_seq1.mrna1;Target=comp149611_c0_seq1 313 533 .
Chr2	gffcl	locus	86744501	86746849	.	.	.	ID=RLOC_00019232;geneIDs=FBgn0051300.1.path1,FBgn0051300.2.path1,comp116659_c0_seq1.path1;transcripts=FBgn0051300.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86744744	86746849	.	-	.	ID=FBgn0051300.2.mrna1;geneID=FBgn0051300.2.path1;Name=FBgn0051300.2;Dir=sensecoverage=100.0;identity=100.0;matches=1182;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019232
Chr2	stalkie_big_nohaplotig	exon	86744744	86744778	100	-	.	Parent=FBgn0051300.2.mrna1;Target=FBgn0051300.2 1148 1182 +
Chr2	stalkie_big_nohaplotig	exon	86744835	86745363	100	-	.	Parent=FBgn0051300.2.mrna1;Target=FBgn0051300.2 619 1147 +
Chr2	stalkie_big_nohaplotig	exon	86745420	86745585	100	-	.	Parent=FBgn0051300.2.mrna1;Target=FBgn0051300.2 453 618 +
Chr2	stalkie_big_nohaplotig	exon	86746398	86746849	100	-	.	Parent=FBgn0051300.2.mrna1;Target=FBgn0051300.2 1 452 +
Chr2	stalkie_big_nohaplotig	CDS	86744744	86744778	.	-	2	Parent=FBgn0051300.2.mrna1;Target=FBgn0051300.2 1148 1182 +
Chr2	stalkie_big_nohaplotig	CDS	86744835	86745363	.	-	0	Parent=FBgn0051300.2.mrna1;Target=FBgn0051300.2 619 1147 +
Chr2	stalkie_big_nohaplotig	CDS	86745420	86745585	.	-	1	Parent=FBgn0051300.2.mrna1;Target=FBgn0051300.2 453 618 +
Chr2	stalkie_big_nohaplotig	CDS	86746398	86746849	.	-	0	Parent=FBgn0051300.2.mrna1;Target=FBgn0051300.2 1 452 +
Chr2	gffcl	locus	86754498	86754716	.	+	.	ID=RLOC_00019233;geneIDs=comp143022_c0_seq1.path1;transcripts=comp143022_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86754498	86754716	.	+	.	ID=comp143022_c0_seq1.mrna1;geneID=comp143022_c0_seq1.path1;Name=comp143022_c0_seq1;Dir=indeterminatecoverage=93.2;identity=99.1;matches=217;mismatches=2;indels=0;unknowns=0;Target=comp143022_c0_seq1 234 16 .;CDS_Target=comp143022_c0_seq1 103 17 .;locus=RLOC_00019233
Chr2	stalkie_big_nohaplotig	exon	86754498	86754716	99	+	.	Parent=comp143022_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	86754499	86754585	.	+	0	Parent=comp143022_c0_seq1.mrna1
Chr2	gffcl	locus	86781695	86782519	.	-	.	ID=RLOC_00019235;geneIDs=comp77803_c0_seq1.path1;transcripts=comp77803_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86781695	86782519	.	-	.	ID=comp77803_c0_seq1.mrna1;geneID=comp77803_c0_seq1.path1;Name=comp77803_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.3;matches=798;mismatches=27;indels=21;unknowns=0;Target=comp77803_c0_seq1 846 1 .;CDS_Target=comp77803_c0_seq1 740 561 .;locus=RLOC_00019235
Chr2	stalkie_big_nohaplotig	exon	86781695	86782519	94	-	.	Parent=comp77803_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	86781801	86781980	.	-	0	Parent=comp77803_c0_seq1.mrna1
Chr2	gffcl	locus	86796020	86797601	.	+	.	ID=RLOC_00019236;geneIDs=FBgn0039316.2.path1;transcripts=FBgn0039316.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86796020	86797601	.	+	.	ID=FBgn0039316.2.mrna1;geneID=FBgn0039316.2.path1;Name=FBgn0039316.2;Dir=sensecoverage=100.0;identity=100.0;matches=1206;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019236
Chr2	stalkie_big_nohaplotig	exon	86796020	86796345	100	+	.	Parent=FBgn0039316.2.mrna1;Target=FBgn0039316.2 1 326 +
Chr2	stalkie_big_nohaplotig	exon	86796610	86796775	100	+	.	Parent=FBgn0039316.2.mrna1;Target=FBgn0039316.2 327 492 +
Chr2	stalkie_big_nohaplotig	exon	86796831	86797359	100	+	.	Parent=FBgn0039316.2.mrna1;Target=FBgn0039316.2 493 1021 +
Chr2	stalkie_big_nohaplotig	exon	86797417	86797601	100	+	.	Parent=FBgn0039316.2.mrna1;Target=FBgn0039316.2 1022 1206 +
Chr2	stalkie_big_nohaplotig	CDS	86796020	86796345	.	+	0	Parent=FBgn0039316.2.mrna1;Target=FBgn0039316.2 1 326 +
Chr2	stalkie_big_nohaplotig	CDS	86796610	86796775	.	+	1	Parent=FBgn0039316.2.mrna1;Target=FBgn0039316.2 327 492 +
Chr2	stalkie_big_nohaplotig	CDS	86796831	86797359	.	+	0	Parent=FBgn0039316.2.mrna1;Target=FBgn0039316.2 493 1021 +
Chr2	stalkie_big_nohaplotig	CDS	86797417	86797601	.	+	2	Parent=FBgn0039316.2.mrna1;Target=FBgn0039316.2 1022 1206 +
Chr2	gffcl	locus	86803091	86806413	.	+	.	ID=RLOC_00019237;geneIDs=FBgn0051300.1.path2;transcripts=FBgn0051300.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	86803091	86806413	.	+	.	ID=FBgn0051300.1.mrna2;geneID=FBgn0051300.1.path2;Name=FBgn0051300.1;Dir=sensecoverage=94.2;identity=99.5;matches=1249;mismatches=6;indels=0;unknowns=0;locus=RLOC_00019237
Chr2	stalkie_big_nohaplotig	exon	86803091	86803465	99	+	.	Parent=FBgn0051300.1.mrna2;Target=FBgn0051300.1 78 452 +
Chr2	stalkie_big_nohaplotig	exon	86805419	86805584	100	+	.	Parent=FBgn0051300.1.mrna2;Target=FBgn0051300.1 453 618 +
Chr2	stalkie_big_nohaplotig	exon	86805643	86806171	99	+	.	Parent=FBgn0051300.1.mrna2;Target=FBgn0051300.1 619 1147 +
Chr2	stalkie_big_nohaplotig	exon	86806229	86806413	100	+	.	Parent=FBgn0051300.1.mrna2;Target=FBgn0051300.1 1148 1332 +
Chr2	stalkie_big_nohaplotig	CDS	86803091	86803465	.	+	2	Parent=FBgn0051300.1.mrna2;Target=FBgn0051300.1 78 452 +
Chr2	stalkie_big_nohaplotig	CDS	86805419	86805584	.	+	2	Parent=FBgn0051300.1.mrna2;Target=FBgn0051300.1 453 618 +
Chr2	stalkie_big_nohaplotig	CDS	86805643	86806171	.	+	1	Parent=FBgn0051300.1.mrna2;Target=FBgn0051300.1 619 1147 +
Chr2	stalkie_big_nohaplotig	CDS	86806229	86806413	.	+	0	Parent=FBgn0051300.1.mrna2;Target=FBgn0051300.1 1148 1332 +
Chr2	gffcl	locus	86819658	86820649	.	-	.	ID=RLOC_00019238;geneIDs=comp136019_c0_seq1.path1;transcripts=comp136019_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86819658	86820649	.	-	.	ID=comp136019_c0_seq1.mrna1;geneID=comp136019_c0_seq1.path1;Name=comp136019_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=932;mismatches=7;indels=0;unknowns=0;Target=comp136019_c0_seq1 163 579 +;locus=RLOC_00019238
Chr2	stalkie_big_nohaplotig	exon	86819658	86820461	99	-	.	Parent=comp136019_c0_seq1.mrna1;Target=comp136019_c0_seq1 136 939 +
Chr2	stalkie_big_nohaplotig	exon	86820515	86820649	98	-	.	Parent=comp136019_c0_seq1.mrna1;Target=comp136019_c0_seq1 1 135 +
Chr2	stalkie_big_nohaplotig	CDS	86820018	86820434	.	-	0	Parent=comp136019_c0_seq1.mrna1
Chr2	gffcl	locus	86921925	86922816	.	+	.	ID=RLOC_00019239;geneIDs=comp155875_c0_seq1.path1;transcripts=comp155875_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86921925	86922816	.	+	.	ID=comp155875_c0_seq1.mrna1;geneID=comp155875_c0_seq1.path1;Name=comp155875_c0_seq1;Dir=sensecoverage=99.6;identity=100.0;matches=726;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019239
Chr2	stalkie_big_nohaplotig	exon	86921925	86922093	100	+	.	Parent=comp155875_c0_seq1.mrna1;Target=comp155875_c0_seq1 2 170 +
Chr2	stalkie_big_nohaplotig	exon	86922152	86922349	100	+	.	Parent=comp155875_c0_seq1.mrna1;Target=comp155875_c0_seq1 171 368 +
Chr2	stalkie_big_nohaplotig	exon	86922403	86922452	100	+	.	Parent=comp155875_c0_seq1.mrna1;Target=comp155875_c0_seq1 369 418 +
Chr2	stalkie_big_nohaplotig	exon	86922508	86922816	100	+	.	Parent=comp155875_c0_seq1.mrna1;Target=comp155875_c0_seq1 419 727 +
Chr2	stalkie_big_nohaplotig	CDS	86922268	86922349	.	+	0	Parent=comp155875_c0_seq1.mrna1;Target=comp155875_c0_seq1 287 368 +
Chr2	stalkie_big_nohaplotig	CDS	86922403	86922452	.	+	2	Parent=comp155875_c0_seq1.mrna1;Target=comp155875_c0_seq1 369 418 +
Chr2	stalkie_big_nohaplotig	CDS	86922508	86922723	.	+	0	Parent=comp155875_c0_seq1.mrna1;Target=comp155875_c0_seq1 419 634 +
Chr2	gffcl	locus	86954206	86965576	.	+	.	ID=RLOC_00019240;geneIDs=FBgn0038681.3.path1,FBgn0038681.4.path1;transcripts=FBgn0038681.3.mrna1,FBgn0038681.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86954206	86965576	.	+	.	ID=FBgn0038681.3.mrna1;geneID=FBgn0038681.3.path1;Name=FBgn0038681.3;Dir=sensecoverage=99.8;identity=97.5;matches=1579;mismatches=41;indels=0;unknowns=0;locus=RLOC_00019240
Chr2	stalkie_big_nohaplotig	exon	86954206	86954307	97	+	.	Parent=FBgn0038681.3.mrna1;Target=FBgn0038681.3 1 102 +
Chr2	stalkie_big_nohaplotig	exon	86956234	86956558	99	+	.	Parent=FBgn0038681.3.mrna1;Target=FBgn0038681.3 103 427 +
Chr2	stalkie_big_nohaplotig	exon	86963786	86963828	97	+	.	Parent=FBgn0038681.3.mrna1;Target=FBgn0038681.3 428 470 +
Chr2	stalkie_big_nohaplotig	exon	86963889	86964005	98	+	.	Parent=FBgn0038681.3.mrna1;Target=FBgn0038681.3 471 587 +
Chr2	stalkie_big_nohaplotig	exon	86964067	86964514	96	+	.	Parent=FBgn0038681.3.mrna1;Target=FBgn0038681.3 588 1035 +
Chr2	stalkie_big_nohaplotig	exon	86964992	86965576	96	+	.	Parent=FBgn0038681.3.mrna1;Target=FBgn0038681.3 1036 1620 +
Chr2	stalkie_big_nohaplotig	CDS	86954206	86954307	.	+	0	Parent=FBgn0038681.3.mrna1;Target=FBgn0038681.3 1 102 +
Chr2	stalkie_big_nohaplotig	CDS	86956234	86956558	.	+	0	Parent=FBgn0038681.3.mrna1;Target=FBgn0038681.3 103 427 +
Chr2	stalkie_big_nohaplotig	CDS	86963786	86963828	.	+	2	Parent=FBgn0038681.3.mrna1;Target=FBgn0038681.3 428 470 +
Chr2	stalkie_big_nohaplotig	CDS	86963889	86964005	.	+	1	Parent=FBgn0038681.3.mrna1;Target=FBgn0038681.3 471 587 +
Chr2	stalkie_big_nohaplotig	CDS	86964067	86964514	.	+	1	Parent=FBgn0038681.3.mrna1;Target=FBgn0038681.3 588 1035 +
Chr2	stalkie_big_nohaplotig	CDS	86964992	86965576	.	+	0	Parent=FBgn0038681.3.mrna1;Target=FBgn0038681.3 1036 1620 +
Chr2	stalkie_big_nohaplotig	mRNA	86956273	86958363	.	+	.	ID=FBgn0038681.4.mrna1;geneID=FBgn0038681.4.path1;Name=FBgn0038681.4;Dir=sensecoverage=97.8;identity=95.5;matches=1416;mismatches=66;indels=0;unknowns=0;locus=RLOC_00019240
Chr2	stalkie_big_nohaplotig	exon	86956273	86956601	85	+	.	Parent=FBgn0038681.4.mrna1;Target=FBgn0038681.4 34 362 +
Chr2	stalkie_big_nohaplotig	exon	86956657	86956773	99	+	.	Parent=FBgn0038681.4.mrna1;Target=FBgn0038681.4 363 479 +
Chr2	stalkie_big_nohaplotig	exon	86956834	86957281	99	+	.	Parent=FBgn0038681.4.mrna1;Target=FBgn0038681.4 480 927 +
Chr2	stalkie_big_nohaplotig	exon	86957776	86958363	97	+	.	Parent=FBgn0038681.4.mrna1;Target=FBgn0038681.4 928 1515 +
Chr2	stalkie_big_nohaplotig	CDS	86956273	86956601	.	+	0	Parent=FBgn0038681.4.mrna1;Target=FBgn0038681.4 34 362 +
Chr2	stalkie_big_nohaplotig	CDS	86956657	86956773	.	+	1	Parent=FBgn0038681.4.mrna1;Target=FBgn0038681.4 363 479 +
Chr2	stalkie_big_nohaplotig	CDS	86956834	86957281	.	+	1	Parent=FBgn0038681.4.mrna1;Target=FBgn0038681.4 480 927 +
Chr2	stalkie_big_nohaplotig	CDS	86957776	86958363	.	+	0	Parent=FBgn0038681.4.mrna1;Target=FBgn0038681.4 928 1515 +
Chr2	gffcl	locus	86968445	86973021	.	+	.	ID=RLOC_00019241;geneIDs=FBgn0038681.2.path1;transcripts=FBgn0038681.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	86968445	86973021	.	+	.	ID=FBgn0038681.2.mrna1;geneID=FBgn0038681.2.path1;Name=FBgn0038681.2;Dir=sensecoverage=100.0;identity=99.6;matches=1611;mismatches=6;indels=0;unknowns=0;locus=RLOC_00019241
Chr2	stalkie_big_nohaplotig	exon	86968445	86968525	100	+	.	Parent=FBgn0038681.2.mrna1;Target=FBgn0038681.2 1 81 +
Chr2	stalkie_big_nohaplotig	exon	86971204	86971586	98	+	.	Parent=FBgn0038681.2.mrna1;Target=FBgn0038681.2 82 464 +
Chr2	stalkie_big_nohaplotig	exon	86971654	86971770	100	+	.	Parent=FBgn0038681.2.mrna1;Target=FBgn0038681.2 465 581 +
Chr2	stalkie_big_nohaplotig	exon	86971830	86972277	99	+	.	Parent=FBgn0038681.2.mrna1;Target=FBgn0038681.2 582 1029 +
Chr2	stalkie_big_nohaplotig	exon	86972434	86973021	99	+	.	Parent=FBgn0038681.2.mrna1;Target=FBgn0038681.2 1030 1617 +
Chr2	stalkie_big_nohaplotig	CDS	86968445	86968525	.	+	0	Parent=FBgn0038681.2.mrna1;Target=FBgn0038681.2 1 81 +
Chr2	stalkie_big_nohaplotig	CDS	86971204	86971586	.	+	0	Parent=FBgn0038681.2.mrna1;Target=FBgn0038681.2 82 464 +
Chr2	stalkie_big_nohaplotig	CDS	86971654	86971770	.	+	1	Parent=FBgn0038681.2.mrna1;Target=FBgn0038681.2 465 581 +
Chr2	stalkie_big_nohaplotig	CDS	86971830	86972277	.	+	1	Parent=FBgn0038681.2.mrna1;Target=FBgn0038681.2 582 1029 +
Chr2	stalkie_big_nohaplotig	CDS	86972434	86973021	.	+	0	Parent=FBgn0038681.2.mrna1;Target=FBgn0038681.2 1030 1617 +
Chr2	gffcl	locus	87011296	87012159	.	-	.	ID=RLOC_00019242;geneIDs=ORF2410.path1;transcripts=ORF2410.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87011296	87012159	.	-	.	ID=ORF2410.mrna1;geneID=ORF2410.path1;Name=ORF2410;Dir=indeterminatecoverage=100.0;identity=100.0;matches=864;mismatches=0;indels=0;unknowns=0;Target=ORF2410 864 1 .;locus=RLOC_00019242
Chr2	stalkie_big_nohaplotig	exon	87011296	87012159	100	-	.	Parent=ORF2410.mrna1
Chr2	stalkie_big_nohaplotig	CDS	87011296	87012159	.	-	0	Parent=ORF2410.mrna1
Chr2	gffcl	locus	87076696	87078033	.	-	.	ID=RLOC_00019243;geneIDs=comp158096_c0_seq1.path1;transcripts=comp158096_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87076696	87078033	.	-	.	ID=comp158096_c0_seq1.mrna1;geneID=comp158096_c0_seq1.path1;Name=comp158096_c0_seq1;Dir=sensecoverage=99.9;identity=95.1;matches=1049;mismatches=37;indels=17;unknowns=0;locus=RLOC_00019243
Chr2	stalkie_big_nohaplotig	exon	87076696	87076869	85	-	.	Parent=comp158096_c0_seq1.mrna1;Target=comp158096_c0_seq1 930 1086 +
Chr2	stalkie_big_nohaplotig	exon	87076999	87077488	96	-	.	Parent=comp158096_c0_seq1.mrna1;Target=comp158096_c0_seq1 440 929 +
Chr2	stalkie_big_nohaplotig	exon	87077595	87078033	97	-	.	Parent=comp158096_c0_seq1.mrna1;Target=comp158096_c0_seq1 1 439 +
Chr2	stalkie_big_nohaplotig	CDS	87077174	87077488	.	-	0	Parent=comp158096_c0_seq1.mrna1;Target=comp158096_c0_seq1 440 754 +
Chr2	stalkie_big_nohaplotig	CDS	87077595	87077810	.	-	0	Parent=comp158096_c0_seq1.mrna1;Target=comp158096_c0_seq1 224 439 +
Chr2	gffcl	locus	87135467	87139919	.	+	.	ID=RLOC_00019244;geneIDs=FBgn0051436.1.path1;transcripts=FBgn0051436.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87135467	87139919	.	+	.	ID=FBgn0051436.1.mrna1;geneID=FBgn0051436.1.path1;Name=FBgn0051436.1;Dir=sensecoverage=100.0;identity=100.0;matches=1104;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019244
Chr2	stalkie_big_nohaplotig	exon	87135467	87135693	100	+	.	Parent=FBgn0051436.1.mrna1;Target=FBgn0051436.1 1 227 +
Chr2	stalkie_big_nohaplotig	exon	87135753	87135918	100	+	.	Parent=FBgn0051436.1.mrna1;Target=FBgn0051436.1 228 393 +
Chr2	stalkie_big_nohaplotig	exon	87137982	87138510	100	+	.	Parent=FBgn0051436.1.mrna1;Target=FBgn0051436.1 394 922 +
Chr2	stalkie_big_nohaplotig	exon	87139738	87139919	100	+	.	Parent=FBgn0051436.1.mrna1;Target=FBgn0051436.1 923 1104 +
Chr2	stalkie_big_nohaplotig	CDS	87135467	87135693	.	+	0	Parent=FBgn0051436.1.mrna1;Target=FBgn0051436.1 1 227 +
Chr2	stalkie_big_nohaplotig	CDS	87135753	87135918	.	+	1	Parent=FBgn0051436.1.mrna1;Target=FBgn0051436.1 228 393 +
Chr2	stalkie_big_nohaplotig	CDS	87137982	87138510	.	+	0	Parent=FBgn0051436.1.mrna1;Target=FBgn0051436.1 394 922 +
Chr2	stalkie_big_nohaplotig	CDS	87139738	87139919	.	+	2	Parent=FBgn0051436.1.mrna1;Target=FBgn0051436.1 923 1104 +
Chr2	gffcl	locus	87240120	87262397	.	-	.	ID=RLOC_00019245;geneIDs=FBgn0037908.1.path1;transcripts=FBgn0037908.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87240120	87262397	.	-	.	ID=FBgn0037908.1.mrna1;geneID=FBgn0037908.1.path1;Name=FBgn0037908.1;Dir=sensecoverage=100.0;identity=99.9;matches=992;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019245
Chr2	stalkie_big_nohaplotig	exon	87240120	87240140	100	-	.	Parent=FBgn0037908.1.mrna1;Target=FBgn0037908.1 973 993 +
Chr2	stalkie_big_nohaplotig	exon	87240496	87240614	100	-	.	Parent=FBgn0037908.1.mrna1;Target=FBgn0037908.1 854 972 +
Chr2	stalkie_big_nohaplotig	exon	87245848	87246105	100	-	.	Parent=FBgn0037908.1.mrna1;Target=FBgn0037908.1 596 853 +
Chr2	stalkie_big_nohaplotig	exon	87246215	87246607	99	-	.	Parent=FBgn0037908.1.mrna1;Target=FBgn0037908.1 203 595 +
Chr2	stalkie_big_nohaplotig	exon	87262196	87262397	100	-	.	Parent=FBgn0037908.1.mrna1;Target=FBgn0037908.1 1 202 +
Chr2	stalkie_big_nohaplotig	CDS	87240120	87240140	.	-	0	Parent=FBgn0037908.1.mrna1;Target=FBgn0037908.1 973 993 +
Chr2	stalkie_big_nohaplotig	CDS	87240496	87240614	.	-	2	Parent=FBgn0037908.1.mrna1;Target=FBgn0037908.1 854 972 +
Chr2	stalkie_big_nohaplotig	CDS	87245848	87246105	.	-	2	Parent=FBgn0037908.1.mrna1;Target=FBgn0037908.1 596 853 +
Chr2	stalkie_big_nohaplotig	CDS	87246215	87246607	.	-	2	Parent=FBgn0037908.1.mrna1;Target=FBgn0037908.1 203 595 +
Chr2	stalkie_big_nohaplotig	CDS	87262196	87262397	.	-	0	Parent=FBgn0037908.1.mrna1;Target=FBgn0037908.1 1 202 +
Chr2	gffcl	locus	87297855	87301322	.	-	.	ID=RLOC_00019246;geneIDs=comp146241_c0_seq1.path1;transcripts=comp146241_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87297855	87301322	.	-	.	ID=comp146241_c0_seq1.mrna1;geneID=comp146241_c0_seq1.path1;Name=comp146241_c0_seq1;Dir=sensecoverage=91.2;identity=100.0;matches=782;mismatches=0;indels=0;unknowns=0;Target=comp146241_c0_seq1 241 339 +;locus=RLOC_00019246
Chr2	stalkie_big_nohaplotig	exon	87297855	87298239	100	-	.	Parent=comp146241_c0_seq1.mrna1;Target=comp146241_c0_seq1 473 857 +
Chr2	stalkie_big_nohaplotig	exon	87300926	87301322	100	-	.	Parent=comp146241_c0_seq1.mrna1;Target=comp146241_c0_seq1 76 472 +
Chr2	stalkie_big_nohaplotig	CDS	87301059	87301157	.	-	0	Parent=comp146241_c0_seq1.mrna1
Chr2	gffcl	locus	87305780	87306161	.	-	.	ID=RLOC_00019247;geneIDs=comp153355_c0_seq1.path1;transcripts=comp153355_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87305780	87306161	.	-	.	ID=comp153355_c0_seq1.mrna1;geneID=comp153355_c0_seq1.path1;Name=comp153355_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=218;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019247
Chr2	stalkie_big_nohaplotig	exon	87305780	87305800	100	-	.	Parent=comp153355_c0_seq1.mrna1;Target=comp153355_c0_seq1 198 218 +
Chr2	stalkie_big_nohaplotig	exon	87305897	87306070	100	-	.	Parent=comp153355_c0_seq1.mrna1;Target=comp153355_c0_seq1 24 197 +
Chr2	stalkie_big_nohaplotig	exon	87306139	87306161	100	-	.	Parent=comp153355_c0_seq1.mrna1;Target=comp153355_c0_seq1 1 23 +
Chr2	stalkie_big_nohaplotig	CDS	87305782	87305800	.	-	1	Parent=comp153355_c0_seq1.mrna1;Target=comp153355_c0_seq1 198 216 +
Chr2	stalkie_big_nohaplotig	CDS	87305897	87305982	.	-	0	Parent=comp153355_c0_seq1.mrna1;Target=comp153355_c0_seq1 112 197 +
Chr2	gffcl	locus	87475471	87479437	.	-	.	ID=RLOC_00019248;geneIDs=comp140360_c0_seq1.path1;transcripts=comp140360_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87475471	87479437	.	-	.	ID=comp140360_c0_seq1.mrna1;geneID=comp140360_c0_seq1.path1;Name=comp140360_c0_seq1;Dir=antisensecoverage=99.7;identity=100.0;matches=286;mismatches=0;indels=0;unknowns=0;Target=comp140360_c0_seq1 189 284 .;locus=RLOC_00019248
Chr2	stalkie_big_nohaplotig	exon	87475471	87475553	100	-	.	Parent=comp140360_c0_seq1.mrna1;Target=comp140360_c0_seq1 1 83 -
Chr2	stalkie_big_nohaplotig	exon	87479235	87479437	100	-	.	Parent=comp140360_c0_seq1.mrna1;Target=comp140360_c0_seq1 84 286 -
Chr2	stalkie_big_nohaplotig	CDS	87479340	87479435	.	-	0	Parent=comp140360_c0_seq1.mrna1
Chr2	gffcl	locus	87487620	87488531	.	-	.	ID=RLOC_00019249;geneIDs=comp53441_c0_seq1.path1;transcripts=comp53441_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87487620	87488531	.	-	.	ID=comp53441_c0_seq1.mrna1;geneID=comp53441_c0_seq1.path1;Name=comp53441_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=912;mismatches=0;indels=0;unknowns=0;Target=comp53441_c0_seq1 912 1 .;CDS_Target=comp53441_c0_seq1 147 1 .;locus=RLOC_00019249
Chr2	stalkie_big_nohaplotig	exon	87487620	87488531	100	-	.	Parent=comp53441_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	87488385	87488531	.	-	0	Parent=comp53441_c0_seq1.mrna1
Chr2	gffcl	locus	87517244	87517493	.	-	.	ID=RLOC_00019250;geneIDs=comp146019_c0_seq1.path1;transcripts=comp146019_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87517244	87517493	.	-	.	ID=comp146019_c0_seq1.mrna1;geneID=comp146019_c0_seq1.path1;Name=comp146019_c0_seq1;Dir=indeterminatecoverage=99.6;identity=96.1;matches=245;mismatches=5;indels=5;unknowns=0;Target=comp146019_c0_seq1 256 2 .;CDS_Target=comp146019_c0_seq1 69 4 .;locus=RLOC_00019250
Chr2	stalkie_big_nohaplotig	exon	87517244	87517493	96	-	.	Parent=comp146019_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	87517426	87517491	.	-	0	Parent=comp146019_c0_seq1.mrna1
Chr2	gffcl	locus	87530515	87536402	.	-	.	ID=RLOC_00019251;geneIDs=comp153641_c0_seq1.path1;transcripts=comp153641_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87530515	87536402	.	-	.	ID=comp153641_c0_seq1.mrna1;geneID=comp153641_c0_seq1.path1;Name=comp153641_c0_seq1;Dir=antisensecoverage=95.2;identity=100.0;matches=675;mismatches=0;indels=0;unknowns=0;Target=comp153641_c0_seq1 285 461 .;locus=RLOC_00019251
Chr2	stalkie_big_nohaplotig	exon	87530515	87531099	100	-	.	Parent=comp153641_c0_seq1.mrna1;Target=comp153641_c0_seq1 23 607 -
Chr2	stalkie_big_nohaplotig	exon	87536313	87536402	100	-	.	Parent=comp153641_c0_seq1.mrna1;Target=comp153641_c0_seq1 608 697 -
Chr2	stalkie_big_nohaplotig	CDS	87530777	87530953	.	-	0	Parent=comp153641_c0_seq1.mrna1
Chr2	gffcl	locus	87582678	87585062	.	-	.	ID=RLOC_00019252;geneIDs=comp163199_c0_seq1.path1;transcripts=comp163199_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87582678	87585062	.	-	.	ID=comp163199_c0_seq1.mrna1;geneID=comp163199_c0_seq1.path1;Name=comp163199_c0_seq1;Dir=antisensecoverage=99.8;identity=96.6;matches=1987;mismatches=26;indels=45;unknowns=0;locus=RLOC_00019252
Chr2	stalkie_big_nohaplotig	exon	87582678	87583135	99	-	.	Parent=comp163199_c0_seq1.mrna1;Target=comp163199_c0_seq1 5 462 -
Chr2	stalkie_big_nohaplotig	exon	87583193	87583351	98	-	.	Parent=comp163199_c0_seq1.mrna1;Target=comp163199_c0_seq1 463 621 -
Chr2	stalkie_big_nohaplotig	exon	87583412	87583462	55	-	.	Parent=comp163199_c0_seq1.mrna1;Target=comp163199_c0_seq1 622 711 -
Chr2	stalkie_big_nohaplotig	exon	87583521	87583944	94	-	.	Parent=comp163199_c0_seq1.mrna1;Target=comp163199_c0_seq1 712 1141 -
Chr2	stalkie_big_nohaplotig	exon	87584004	87584480	99	-	.	Parent=comp163199_c0_seq1.mrna1;Target=comp163199_c0_seq1 1142 1618 -
Chr2	stalkie_big_nohaplotig	exon	87584544	87584666	100	-	.	Parent=comp163199_c0_seq1.mrna1;Target=comp163199_c0_seq1 1619 1741 -
Chr2	stalkie_big_nohaplotig	exon	87584742	87585062	99	-	.	Parent=comp163199_c0_seq1.mrna1;Target=comp163199_c0_seq1 1742 2062 -
Chr2	stalkie_big_nohaplotig	CDS	87583686	87583944	.	-	1	Parent=comp163199_c0_seq1.mrna1;Target=comp163199_c0_seq1 883 1141 .
Chr2	stalkie_big_nohaplotig	CDS	87584004	87584480	.	-	1	Parent=comp163199_c0_seq1.mrna1;Target=comp163199_c0_seq1 1142 1618 .
Chr2	stalkie_big_nohaplotig	CDS	87584544	87584647	.	-	0	Parent=comp163199_c0_seq1.mrna1;Target=comp163199_c0_seq1 1619 1722 .
Chr2	gffcl	locus	87646934	87652292	.	+	.	ID=RLOC_00019253;geneIDs=FBgn0031785.1.path1;transcripts=FBgn0031785.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87646934	87652292	.	+	.	ID=FBgn0031785.1.mrna1;geneID=FBgn0031785.1.path1;Name=FBgn0031785.1;Dir=sensecoverage=100.0;identity=99.7;matches=4970;mismatches=13;indels=0;unknowns=0;locus=RLOC_00019253
Chr2	stalkie_big_nohaplotig	exon	87646934	87650524	99	+	.	Parent=FBgn0031785.1.mrna1;Target=FBgn0031785.1 1 3591 +
Chr2	stalkie_big_nohaplotig	exon	87650594	87651383	99	+	.	Parent=FBgn0031785.1.mrna1;Target=FBgn0031785.1 3592 4381 +
Chr2	stalkie_big_nohaplotig	exon	87651509	87651681	100	+	.	Parent=FBgn0031785.1.mrna1;Target=FBgn0031785.1 4382 4554 +
Chr2	stalkie_big_nohaplotig	exon	87651864	87652292	100	+	.	Parent=FBgn0031785.1.mrna1;Target=FBgn0031785.1 4555 4983 +
Chr2	stalkie_big_nohaplotig	CDS	87646934	87650524	.	+	0	Parent=FBgn0031785.1.mrna1;Target=FBgn0031785.1 1 3591 +
Chr2	stalkie_big_nohaplotig	CDS	87650594	87651383	.	+	0	Parent=FBgn0031785.1.mrna1;Target=FBgn0031785.1 3592 4381 +
Chr2	stalkie_big_nohaplotig	CDS	87651509	87651681	.	+	2	Parent=FBgn0031785.1.mrna1;Target=FBgn0031785.1 4382 4554 +
Chr2	stalkie_big_nohaplotig	CDS	87651864	87652292	.	+	0	Parent=FBgn0031785.1.mrna1;Target=FBgn0031785.1 4555 4983 +
Chr2	gffcl	locus	87676133	87677550	.	-	.	ID=RLOC_00019254;geneIDs=comp160299_c2_seq1.path1;transcripts=comp160299_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87676133	87677550	.	-	.	ID=comp160299_c2_seq1.mrna1;geneID=comp160299_c2_seq1.path1;Name=comp160299_c2_seq1;Dir=indeterminatecoverage=98.9;identity=97.2;matches=1381;mismatches=37;indels=3;unknowns=0;Target=comp160299_c2_seq1 1437 17 .;CDS_Target=comp160299_c2_seq1 347 243 .;locus=RLOC_00019254
Chr2	stalkie_big_nohaplotig	exon	87676133	87677550	97	-	.	Parent=comp160299_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	87677221	87677324	.	-	0	Parent=comp160299_c2_seq1.mrna1
Chr2	gffcl	locus	87723674	87761356	.	+	.	ID=RLOC_00019255;geneIDs=FBgn0019650.1.path2;transcripts=FBgn0019650.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	87723674	87761356	.	+	.	ID=FBgn0019650.1.mrna2;geneID=FBgn0019650.1.path2;Name=FBgn0019650.1;Dir=sensecoverage=73.0;identity=100.0;matches=1182;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019255
Chr2	stalkie_big_nohaplotig	exon	87723674	87723914	100	+	.	Parent=FBgn0019650.1.mrna2;Target=FBgn0019650.1 439 679 +
Chr2	stalkie_big_nohaplotig	exon	87725807	87725980	100	+	.	Parent=FBgn0019650.1.mrna2;Target=FBgn0019650.1 680 853 +
Chr2	stalkie_big_nohaplotig	exon	87740073	87740155	100	+	.	Parent=FBgn0019650.1.mrna2;Target=FBgn0019650.1 854 936 +
Chr2	stalkie_big_nohaplotig	exon	87760438	87760805	100	+	.	Parent=FBgn0019650.1.mrna2;Target=FBgn0019650.1 937 1304 +
Chr2	stalkie_big_nohaplotig	exon	87760858	87761063	100	+	.	Parent=FBgn0019650.1.mrna2;Target=FBgn0019650.1 1305 1510 +
Chr2	stalkie_big_nohaplotig	exon	87761247	87761356	100	+	.	Parent=FBgn0019650.1.mrna2;Target=FBgn0019650.1 1511 1620 +
Chr2	stalkie_big_nohaplotig	CDS	87723674	87723914	.	+	0	Parent=FBgn0019650.1.mrna2;Target=FBgn0019650.1 439 679 +
Chr2	stalkie_big_nohaplotig	CDS	87725807	87725980	.	+	2	Parent=FBgn0019650.1.mrna2;Target=FBgn0019650.1 680 853 +
Chr2	stalkie_big_nohaplotig	CDS	87740073	87740155	.	+	2	Parent=FBgn0019650.1.mrna2;Target=FBgn0019650.1 854 936 +
Chr2	stalkie_big_nohaplotig	CDS	87760438	87760805	.	+	0	Parent=FBgn0019650.1.mrna2;Target=FBgn0019650.1 937 1304 +
Chr2	stalkie_big_nohaplotig	CDS	87760858	87761063	.	+	1	Parent=FBgn0019650.1.mrna2;Target=FBgn0019650.1 1305 1510 +
Chr2	stalkie_big_nohaplotig	CDS	87761247	87761356	.	+	2	Parent=FBgn0019650.1.mrna2;Target=FBgn0019650.1 1511 1620 +
Chr2	gffcl	locus	87734774	87741506	.	-	.	ID=RLOC_00019256;geneIDs=comp145584_c0_seq1.path1;transcripts=comp145584_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87734774	87741506	.	-	.	ID=comp145584_c0_seq1.mrna1;geneID=comp145584_c0_seq1.path1;Name=comp145584_c0_seq1;Dir=antisensecoverage=100.0;identity=97.3;matches=576;mismatches=16;indels=0;unknowns=0;Target=comp145584_c0_seq1 390 458 .;locus=RLOC_00019256
Chr2	stalkie_big_nohaplotig	exon	87734774	87734848	97	-	.	Parent=comp145584_c0_seq1.mrna1;Target=comp145584_c0_seq1 1 75 -
Chr2	stalkie_big_nohaplotig	exon	87735468	87735879	96	-	.	Parent=comp145584_c0_seq1.mrna1;Target=comp145584_c0_seq1 76 487 -
Chr2	stalkie_big_nohaplotig	exon	87741402	87741506	99	-	.	Parent=comp145584_c0_seq1.mrna1;Target=comp145584_c0_seq1 488 592 -
Chr2	stalkie_big_nohaplotig	CDS	87735782	87735850	.	-	0	Parent=comp145584_c0_seq1.mrna1
Chr2	gffcl	locus	87790186	87790342	.	+	.	ID=RLOC_00019257;geneIDs=comp154300_c0_seq1.path2;transcripts=comp154300_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	87790186	87790342	.	+	.	ID=comp154300_c0_seq1.mrna2;geneID=comp154300_c0_seq1.path2;Name=comp154300_c0_seq1;Dir=indeterminatecoverage=9.1;identity=100.0;matches=157;mismatches=0;indels=0;unknowns=0;Target=comp154300_c0_seq1 1470 1314 .;CDS_Target=comp154300_c0_seq1 1469 1314 .;locus=RLOC_00019257
Chr2	stalkie_big_nohaplotig	exon	87790186	87790342	100	+	.	Parent=comp154300_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	87790186	87790341	.	+	2	Parent=comp154300_c0_seq1.mrna2
Chr2	gffcl	locus	87840919	87841846	.	+	.	ID=RLOC_00019258;geneIDs=comp159153_c0_seq1.path1;transcripts=comp159153_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87840919	87841846	.	+	.	ID=comp159153_c0_seq1.mrna1;geneID=comp159153_c0_seq1.path1;Name=comp159153_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.3;matches=912;mismatches=15;indels=1;unknowns=0;Target=comp159153_c0_seq1 928 2 .;CDS_Target=comp159153_c0_seq1 691 398 .;locus=RLOC_00019258
Chr2	stalkie_big_nohaplotig	exon	87840919	87841846	98	+	.	Parent=comp159153_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	87841316	87841609	.	+	0	Parent=comp159153_c0_seq1.mrna1
Chr2	gffcl	locus	87882091	87882348	.	+	.	ID=RLOC_00019259;geneIDs=comp52916_c0_seq1.path1;transcripts=comp52916_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87882091	87882348	.	+	.	ID=comp52916_c0_seq1.mrna1;geneID=comp52916_c0_seq1.path1;Name=comp52916_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=257;mismatches=1;indels=0;unknowns=0;Target=comp52916_c0_seq1 258 1 .;CDS_Target=comp52916_c0_seq1 256 191 .;locus=RLOC_00019259
Chr2	stalkie_big_nohaplotig	exon	87882091	87882348	99	+	.	Parent=comp52916_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	87882281	87882346	.	+	0	Parent=comp52916_c0_seq1.mrna1
Chr2	gffcl	locus	87896045	87902304	.	-	.	ID=RLOC_00019260;geneIDs=FBgn0037906.2.path1;transcripts=FBgn0037906.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87896045	87902304	.	-	.	ID=FBgn0037906.2.mrna1;geneID=FBgn0037906.2.path1;Name=FBgn0037906.2;Dir=sensecoverage=100.0;identity=100.0;matches=786;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019260
Chr2	stalkie_big_nohaplotig	exon	87896045	87896226	100	-	.	Parent=FBgn0037906.2.mrna1;Target=FBgn0037906.2 605 786 +
Chr2	stalkie_big_nohaplotig	exon	87901512	87901916	100	-	.	Parent=FBgn0037906.2.mrna1;Target=FBgn0037906.2 200 604 +
Chr2	stalkie_big_nohaplotig	exon	87902106	87902304	100	-	.	Parent=FBgn0037906.2.mrna1;Target=FBgn0037906.2 1 199 +
Chr2	stalkie_big_nohaplotig	CDS	87896045	87896226	.	-	2	Parent=FBgn0037906.2.mrna1;Target=FBgn0037906.2 605 786 +
Chr2	stalkie_big_nohaplotig	CDS	87901512	87901916	.	-	2	Parent=FBgn0037906.2.mrna1;Target=FBgn0037906.2 200 604 +
Chr2	stalkie_big_nohaplotig	CDS	87902106	87902304	.	-	0	Parent=FBgn0037906.2.mrna1;Target=FBgn0037906.2 1 199 +
Chr2	gffcl	locus	87914642	87915679	.	-	.	ID=RLOC_00019261;geneIDs=comp153229_c1_seq1.path1;transcripts=comp153229_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87914642	87915679	.	-	.	ID=comp153229_c1_seq1.mrna1;geneID=comp153229_c1_seq1.path1;Name=comp153229_c1_seq1;Dir=indeterminatecoverage=93.8;identity=88.2;matches=695;mismatches=45;indels=48;unknowns=0;Target=comp153229_c1_seq1 841 824 .;locus=RLOC_00019261
Chr2	stalkie_big_nohaplotig	exon	87914642	87914794	73	-	.	Parent=comp153229_c1_seq1.mrna1;Target=comp153229_c1_seq1 907 770 .
Chr2	stalkie_big_nohaplotig	exon	87915051	87915058	100	-	.	Parent=comp153229_c1_seq1.mrna1;Target=comp153229_c1_seq1 683 676 .
Chr2	stalkie_big_nohaplotig	exon	87915067	87915118	86	-	.	Parent=comp153229_c1_seq1.mrna1;Target=comp153229_c1_seq1 628 581 .
Chr2	stalkie_big_nohaplotig	exon	87915135	87915679	91	-	.	Parent=comp153229_c1_seq1.mrna1;Target=comp153229_c1_seq1 574 1 .
Chr2	stalkie_big_nohaplotig	CDS	87914709	87914733	.	-	0	Parent=comp153229_c1_seq1.mrna1
Chr2	gffcl	locus	87918719	87920665	.	+	.	ID=RLOC_00019262;geneIDs=FBgn0043575.1.path1;transcripts=FBgn0043575.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87918719	87920665	.	+	.	ID=FBgn0043575.1.mrna1;geneID=FBgn0043575.1.path1;Name=FBgn0043575.1;Dir=sensecoverage=100.0;identity=99.6;matches=562;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019262
Chr2	stalkie_big_nohaplotig	exon	87918719	87918770	100	+	.	Parent=FBgn0043575.1.mrna1;Target=FBgn0043575.1 1 52 +
Chr2	stalkie_big_nohaplotig	exon	87920154	87920665	99	+	.	Parent=FBgn0043575.1.mrna1;Target=FBgn0043575.1 53 564 +
Chr2	stalkie_big_nohaplotig	CDS	87918719	87918770	.	+	0	Parent=FBgn0043575.1.mrna1;Target=FBgn0043575.1 1 52 +
Chr2	stalkie_big_nohaplotig	CDS	87920154	87920665	.	+	2	Parent=FBgn0043575.1.mrna1;Target=FBgn0043575.1 53 564 +
Chr2	gffcl	locus	87944109	87944186	.	+	.	ID=RLOC_00019264;geneIDs=comp161523_c0_seq1.path2;transcripts=comp161523_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	87944109	87944186	.	+	.	ID=comp161523_c0_seq1.mrna2;geneID=comp161523_c0_seq1.path2;Name=comp161523_c0_seq1;Dir=indeterminatecoverage=6.4;identity=96.2;matches=75;mismatches=3;indels=0;unknowns=0;Target=comp161523_c0_seq1 1215 1138 .;locus=RLOC_00019264
Chr2	stalkie_big_nohaplotig	exon	87944109	87944186	96	+	.	Parent=comp161523_c0_seq1.mrna2
Chr2	gffcl	locus	87970810	87976088	.	+	.	ID=RLOC_00019265;geneIDs=comp160524_c1_seq1.path1;transcripts=comp160524_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87970810	87976088	.	+	.	ID=comp160524_c1_seq1.mrna1;geneID=comp160524_c1_seq1.path1;Name=comp160524_c1_seq1;Dir=sensecoverage=99.4;identity=99.7;matches=2071;mismatches=7;indels=0;unknowns=0;Target=comp160524_c1_seq1 2 445 +;locus=RLOC_00019265
Chr2	stalkie_big_nohaplotig	exon	87970810	87971316	99	+	.	Parent=comp160524_c1_seq1.mrna1;Target=comp160524_c1_seq1 1 507 +
Chr2	stalkie_big_nohaplotig	exon	87972809	87973250	100	+	.	Parent=comp160524_c1_seq1.mrna1;Target=comp160524_c1_seq1 508 949 +
Chr2	stalkie_big_nohaplotig	exon	87974692	87975217	99	+	.	Parent=comp160524_c1_seq1.mrna1;Target=comp160524_c1_seq1 950 1475 +
Chr2	stalkie_big_nohaplotig	exon	87975289	87975402	100	+	.	Parent=comp160524_c1_seq1.mrna1;Target=comp160524_c1_seq1 1476 1589 +
Chr2	stalkie_big_nohaplotig	exon	87975455	87975479	100	+	.	Parent=comp160524_c1_seq1.mrna1;Target=comp160524_c1_seq1 1590 1614 +
Chr2	stalkie_big_nohaplotig	exon	87975563	87975695	100	+	.	Parent=comp160524_c1_seq1.mrna1;Target=comp160524_c1_seq1 1615 1747 +
Chr2	stalkie_big_nohaplotig	exon	87975758	87976088	100	+	.	Parent=comp160524_c1_seq1.mrna1;Target=comp160524_c1_seq1 1748 2078 +
Chr2	stalkie_big_nohaplotig	CDS	87970811	87971254	.	+	0	Parent=comp160524_c1_seq1.mrna1
Chr2	gffcl	locus	87994436	87995611	.	+	.	ID=RLOC_00019266;geneIDs=comp158785_c0_seq1.path1;transcripts=comp158785_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87994436	87995611	.	+	.	ID=comp158785_c0_seq1.mrna1;geneID=comp158785_c0_seq1.path1;Name=comp158785_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.6;matches=1142;mismatches=34;indels=6;unknowns=0;Target=comp158785_c0_seq1 1183 2 .;CDS_Target=comp158785_c0_seq1 566 411 .;locus=RLOC_00019266
Chr2	stalkie_big_nohaplotig	exon	87994436	87995611	96	+	.	Parent=comp158785_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	87994845	87994999	.	+	0	Parent=comp158785_c0_seq1.mrna1
Chr2	gffcl	locus	87997106	87997760	.	-	.	ID=RLOC_00019267;geneIDs=comp145186_c0_seq1.path1;transcripts=comp145186_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	87997106	87997760	.	-	.	ID=comp145186_c0_seq1.mrna1;geneID=comp145186_c0_seq1.path1;Name=comp145186_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=653;mismatches=2;indels=0;unknowns=0;Target=comp145186_c0_seq1 655 1 .;CDS_Target=comp145186_c0_seq1 429 292 .;locus=RLOC_00019267
Chr2	stalkie_big_nohaplotig	exon	87997106	87997760	99	-	.	Parent=comp145186_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	87997332	87997469	.	-	0	Parent=comp145186_c0_seq1.mrna1
Chr2	gffcl	locus	88009806	88011780	.	+	.	ID=RLOC_00019268;geneIDs=FBgn0031785.2.path1;transcripts=FBgn0031785.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88009806	88011780	.	+	.	ID=FBgn0031785.2.mrna1;geneID=FBgn0031785.2.path1;Name=FBgn0031785.2;Dir=indeterminatecoverage=39.7;identity=98.2;matches=1954;mismatches=19;indels=17;unknowns=0;Target=FBgn0031785.2 1988 1 .;CDS_Target=FBgn0031785.2 113 3 .;locus=RLOC_00019268
Chr2	stalkie_big_nohaplotig	exon	88009806	88011780	98	+	.	Parent=FBgn0031785.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88009808	88009905	.	+	0	Parent=FBgn0031785.2.mrna1
Chr2	gffcl	locus	88136954	88138639	.	-	.	ID=RLOC_00019269;geneIDs=FBgn0046225.1.path1;transcripts=FBgn0046225.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88136954	88138639	.	-	.	ID=FBgn0046225.1.mrna1;geneID=FBgn0046225.1.path1;Name=FBgn0046225.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1682;mismatches=4;indels=0;unknowns=0;Target=FBgn0046225.1 1686 1 .;locus=RLOC_00019269
Chr2	stalkie_big_nohaplotig	exon	88136954	88138639	99	-	.	Parent=FBgn0046225.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88136954	88138639	.	-	0	Parent=FBgn0046225.1.mrna1
Chr2	gffcl	locus	88147429	88155505	.	+	.	ID=RLOC_00019270;geneIDs=FBgn0037906.1.path1;transcripts=FBgn0037906.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88147429	88155505	.	+	.	ID=FBgn0037906.1.mrna1;geneID=FBgn0037906.1.path1;Name=FBgn0037906.1;Dir=sensecoverage=100.0;identity=100.0;matches=732;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019270
Chr2	stalkie_big_nohaplotig	exon	88147429	88147537	100	+	.	Parent=FBgn0037906.1.mrna1;Target=FBgn0037906.1 1 109 +
Chr2	stalkie_big_nohaplotig	exon	88150703	88151134	100	+	.	Parent=FBgn0037906.1.mrna1;Target=FBgn0037906.1 110 541 +
Chr2	stalkie_big_nohaplotig	exon	88155315	88155505	100	+	.	Parent=FBgn0037906.1.mrna1;Target=FBgn0037906.1 542 732 +
Chr2	stalkie_big_nohaplotig	CDS	88147429	88147537	.	+	0	Parent=FBgn0037906.1.mrna1;Target=FBgn0037906.1 1 109 +
Chr2	stalkie_big_nohaplotig	CDS	88150703	88151134	.	+	2	Parent=FBgn0037906.1.mrna1;Target=FBgn0037906.1 110 541 +
Chr2	stalkie_big_nohaplotig	CDS	88155315	88155505	.	+	2	Parent=FBgn0037906.1.mrna1;Target=FBgn0037906.1 542 732 +
Chr2	gffcl	locus	88196410	88196561	.	-	.	ID=RLOC_00019271;geneIDs=comp149866_c0_seq1.path4;transcripts=comp149866_c0_seq1.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	88196410	88196561	.	-	.	ID=comp149866_c0_seq1.mrna4;geneID=comp149866_c0_seq1.path4;Name=comp149866_c0_seq1;Dir=indeterminatecoverage=39.5;identity=76.6;matches=121;mismatches=19;indels=18;unknowns=0;Target=comp149866_c0_seq1 146 1 .;CDS_Target=comp149866_c0_seq1 63 1 .;locus=RLOC_00019271
Chr2	stalkie_big_nohaplotig	exon	88196410	88196561	76	-	.	Parent=comp149866_c0_seq1.mrna4
Chr2	stalkie_big_nohaplotig	CDS	88196495	88196561	.	-	0	Parent=comp149866_c0_seq1.mrna4
Chr2	gffcl	locus	88204618	88205137	.	-	.	ID=RLOC_00019272;geneIDs=comp137242_c0_seq1.path1;transcripts=comp137242_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88204618	88205137	.	-	.	ID=comp137242_c0_seq1.mrna1;geneID=comp137242_c0_seq1.path1;Name=comp137242_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=517;mismatches=3;indels=0;unknowns=0;Target=comp137242_c0_seq1 520 1 .;CDS_Target=comp137242_c0_seq1 231 118 .;locus=RLOC_00019272
Chr2	stalkie_big_nohaplotig	exon	88204618	88205137	99	-	.	Parent=comp137242_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88204907	88205020	.	-	0	Parent=comp137242_c0_seq1.mrna1
Chr2	gffcl	locus	88205798	88247401	.	+	.	ID=RLOC_00019273;geneIDs=FBgn0051374.1.path1,comp135663_c0_seq1.path1,comp136945_c0_seq1.path1;transcripts=FBgn0051374.1.mrna1,comp136945_c0_seq1.mrna1,comp135663_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88205798	88247401	.	+	.	ID=FBgn0051374.1.mrna1;geneID=FBgn0051374.1.path1;Name=FBgn0051374.1;Dir=sensecoverage=100.0;identity=99.8;matches=2381;mismatches=3;indels=1;unknowns=0;Target=FBgn0051374.1 3 95 +;locus=RLOC_00019273
Chr2	stalkie_big_nohaplotig	exon	88205798	88206538	99	+	.	Parent=FBgn0051374.1.mrna1;Target=FBgn0051374.1 1 742 +
Chr2	stalkie_big_nohaplotig	exon	88240869	88240995	100	+	.	Parent=FBgn0051374.1.mrna1;Target=FBgn0051374.1 743 869 +
Chr2	stalkie_big_nohaplotig	exon	88241064	88241153	100	+	.	Parent=FBgn0051374.1.mrna1;Target=FBgn0051374.1 870 959 +
Chr2	stalkie_big_nohaplotig	exon	88243844	88244087	100	+	.	Parent=FBgn0051374.1.mrna1;Target=FBgn0051374.1 960 1203 +
Chr2	stalkie_big_nohaplotig	exon	88244159	88244644	100	+	.	Parent=FBgn0051374.1.mrna1;Target=FBgn0051374.1 1204 1689 +
Chr2	stalkie_big_nohaplotig	exon	88244979	88245241	99	+	.	Parent=FBgn0051374.1.mrna1;Target=FBgn0051374.1 1690 1952 +
Chr2	stalkie_big_nohaplotig	exon	88245298	88245406	99	+	.	Parent=FBgn0051374.1.mrna1;Target=FBgn0051374.1 1953 2061 +
Chr2	stalkie_big_nohaplotig	exon	88247012	88247137	99	+	.	Parent=FBgn0051374.1.mrna1;Target=FBgn0051374.1 2062 2187 +
Chr2	stalkie_big_nohaplotig	exon	88247204	88247401	100	+	.	Parent=FBgn0051374.1.mrna1;Target=FBgn0051374.1 2188 2385 +
Chr2	stalkie_big_nohaplotig	CDS	88205800	88205891	.	+	0	Parent=FBgn0051374.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88240045	88240890	.	+	.	ID=comp136945_c0_seq1.mrna1;geneID=comp136945_c0_seq1.path1;Name=comp136945_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=841;mismatches=5;indels=0;unknowns=0;Target=comp136945_c0_seq1 846 1 .;CDS_Target=comp136945_c0_seq1 132 55 .;locus=RLOC_00019273
Chr2	stalkie_big_nohaplotig	exon	88240045	88240890	99	+	.	Parent=comp136945_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88240099	88240176	.	+	0	Parent=comp136945_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88244622	88244999	.	+	.	ID=comp135663_c0_seq1.mrna1;geneID=comp135663_c0_seq1.path1;Name=comp135663_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=276;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019273
Chr2	stalkie_big_nohaplotig	exon	88244622	88244876	100	+	.	Parent=comp135663_c0_seq1.mrna1;Target=comp135663_c0_seq1 1 255 +
Chr2	stalkie_big_nohaplotig	exon	88244979	88244999	100	+	.	Parent=comp135663_c0_seq1.mrna1;Target=comp135663_c0_seq1 256 276 +
Chr2	stalkie_big_nohaplotig	CDS	88244736	88244876	.	+	0	Parent=comp135663_c0_seq1.mrna1;Target=comp135663_c0_seq1 115 255 +
Chr2	stalkie_big_nohaplotig	CDS	88244979	88244999	.	+	0	Parent=comp135663_c0_seq1.mrna1;Target=comp135663_c0_seq1 256 276 +
Chr2	gffcl	locus	88216582	88217248	.	-	.	ID=RLOC_00019274;geneIDs=comp146514_c0_seq1.path1;transcripts=comp146514_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88216582	88217248	.	-	.	ID=comp146514_c0_seq1.mrna1;geneID=comp146514_c0_seq1.path1;Name=comp146514_c0_seq1;Dir=indeterminatecoverage=96.6;identity=97.5;matches=661;mismatches=6;indels=11;unknowns=0;Target=comp146514_c0_seq1 702 25 .;CDS_Target=comp146514_c0_seq1 131 27 .;locus=RLOC_00019274
Chr2	stalkie_big_nohaplotig	exon	88216582	88217248	97	-	.	Parent=comp146514_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88217142	88217246	.	-	0	Parent=comp146514_c0_seq1.mrna1
Chr2	gffcl	locus	88238723	88239265	.	-	.	ID=RLOC_00019275;geneIDs=comp138487_c0_seq1.path1;transcripts=comp138487_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88238723	88239265	.	-	.	ID=comp138487_c0_seq1.mrna1;geneID=comp138487_c0_seq1.path1;Name=comp138487_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.9;matches=522;mismatches=17;indels=17;unknowns=0;Target=comp138487_c0_seq1 552 1 .;CDS_Target=comp138487_c0_seq1 509 405 .;locus=RLOC_00019275
Chr2	stalkie_big_nohaplotig	exon	88238723	88239265	93	-	.	Parent=comp138487_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88238766	88238870	.	-	0	Parent=comp138487_c0_seq1.mrna1
Chr2	gffcl	locus	88245575	88246765	.	+	.	ID=RLOC_00019276;geneIDs=comp152741_c0_seq1.path1;transcripts=comp152741_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88245575	88246765	.	+	.	ID=comp152741_c0_seq1.mrna1;geneID=comp152741_c0_seq1.path1;Name=comp152741_c0_seq1;Dir=indeterminatecoverage=98.6;identity=98.6;matches=1183;mismatches=8;indels=9;unknowns=0;Target=comp152741_c0_seq1 1200 1 .;CDS_Target=comp152741_c0_seq1 382 182 .;locus=RLOC_00019276
Chr2	stalkie_big_nohaplotig	exon	88245575	88246765	98	+	.	Parent=comp152741_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88245756	88245956	.	+	0	Parent=comp152741_c0_seq1.mrna1
Chr2	gffcl	locus	88260606	88261749	.	+	.	ID=RLOC_00019277;geneIDs=FBgn0037902.1.path1;transcripts=FBgn0037902.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88260606	88261749	.	+	.	ID=FBgn0037902.1.mrna1;geneID=FBgn0037902.1.path1;Name=FBgn0037902.1;Dir=sensecoverage=100.0;identity=99.4;matches=1085;mismatches=7;indels=0;unknowns=0;locus=RLOC_00019277
Chr2	stalkie_big_nohaplotig	exon	88260606	88260859	99	+	.	Parent=FBgn0037902.1.mrna1;Target=FBgn0037902.1 1 254 +
Chr2	stalkie_big_nohaplotig	exon	88260912	88261749	99	+	.	Parent=FBgn0037902.1.mrna1;Target=FBgn0037902.1 255 1092 +
Chr2	stalkie_big_nohaplotig	CDS	88260651	88260859	.	+	0	Parent=FBgn0037902.1.mrna1;Target=FBgn0037902.1 46 254 +
Chr2	stalkie_big_nohaplotig	CDS	88260912	88261749	.	+	1	Parent=FBgn0037902.1.mrna1;Target=FBgn0037902.1 255 1092 +
Chr2	gffcl	locus	88264704	88268743	.	+	.	ID=RLOC_00019278;geneIDs=FBgn0037901.1.path1;transcripts=FBgn0037901.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88264704	88268743	.	+	.	ID=FBgn0037901.1.mrna1;geneID=FBgn0037901.1.path1;Name=FBgn0037901.1;Dir=sensecoverage=100.0;identity=99.7;matches=1752;mismatches=6;indels=0;unknowns=0;locus=RLOC_00019278
Chr2	stalkie_big_nohaplotig	exon	88264704	88264954	100	+	.	Parent=FBgn0037901.1.mrna1;Target=FBgn0037901.1 1 251 +
Chr2	stalkie_big_nohaplotig	exon	88265016	88265492	99	+	.	Parent=FBgn0037901.1.mrna1;Target=FBgn0037901.1 252 728 +
Chr2	stalkie_big_nohaplotig	exon	88265550	88265998	99	+	.	Parent=FBgn0037901.1.mrna1;Target=FBgn0037901.1 729 1177 +
Chr2	stalkie_big_nohaplotig	exon	88266058	88266226	100	+	.	Parent=FBgn0037901.1.mrna1;Target=FBgn0037901.1 1178 1346 +
Chr2	stalkie_big_nohaplotig	exon	88266317	88266469	100	+	.	Parent=FBgn0037901.1.mrna1;Target=FBgn0037901.1 1347 1499 +
Chr2	stalkie_big_nohaplotig	exon	88268429	88268596	98	+	.	Parent=FBgn0037901.1.mrna1;Target=FBgn0037901.1 1500 1667 +
Chr2	stalkie_big_nohaplotig	exon	88268653	88268743	100	+	.	Parent=FBgn0037901.1.mrna1;Target=FBgn0037901.1 1668 1758 +
Chr2	stalkie_big_nohaplotig	CDS	88264704	88264954	.	+	0	Parent=FBgn0037901.1.mrna1;Target=FBgn0037901.1 1 251 +
Chr2	stalkie_big_nohaplotig	CDS	88265016	88265492	.	+	1	Parent=FBgn0037901.1.mrna1;Target=FBgn0037901.1 252 728 +
Chr2	stalkie_big_nohaplotig	CDS	88265550	88265998	.	+	1	Parent=FBgn0037901.1.mrna1;Target=FBgn0037901.1 729 1177 +
Chr2	stalkie_big_nohaplotig	CDS	88266058	88266226	.	+	2	Parent=FBgn0037901.1.mrna1;Target=FBgn0037901.1 1178 1346 +
Chr2	stalkie_big_nohaplotig	CDS	88266317	88266469	.	+	1	Parent=FBgn0037901.1.mrna1;Target=FBgn0037901.1 1347 1499 +
Chr2	stalkie_big_nohaplotig	CDS	88268429	88268596	.	+	1	Parent=FBgn0037901.1.mrna1;Target=FBgn0037901.1 1500 1667 +
Chr2	stalkie_big_nohaplotig	CDS	88268653	88268743	.	+	1	Parent=FBgn0037901.1.mrna1;Target=FBgn0037901.1 1668 1758 +
Chr2	gffcl	locus	88269950	88273456	.	-	.	ID=RLOC_00019279;geneIDs=FBgn0037900.1.path1;transcripts=FBgn0037900.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88269950	88273456	.	-	.	ID=FBgn0037900.1.mrna1;geneID=FBgn0037900.1.path1;Name=FBgn0037900.1;Dir=sensecoverage=100.0;identity=100.0;matches=1350;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019279
Chr2	stalkie_big_nohaplotig	exon	88269950	88270244	100	-	.	Parent=FBgn0037900.1.mrna1;Target=FBgn0037900.1 1056 1350 +
Chr2	stalkie_big_nohaplotig	exon	88272402	88273456	100	-	.	Parent=FBgn0037900.1.mrna1;Target=FBgn0037900.1 1 1055 +
Chr2	stalkie_big_nohaplotig	CDS	88269950	88270244	.	-	1	Parent=FBgn0037900.1.mrna1;Target=FBgn0037900.1 1056 1350 +
Chr2	stalkie_big_nohaplotig	CDS	88272402	88273456	.	-	0	Parent=FBgn0037900.1.mrna1;Target=FBgn0037900.1 1 1055 +
Chr2	gffcl	locus	88275776	88276483	.	+	.	ID=RLOC_00019280;geneIDs=FBgn0037899.1.path1;transcripts=FBgn0037899.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88275776	88276483	.	+	.	ID=FBgn0037899.1.mrna1;geneID=FBgn0037899.1.path1;Name=FBgn0037899.1;Dir=sensecoverage=100.0;identity=99.8;matches=599;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019280
Chr2	stalkie_big_nohaplotig	exon	88275776	88275880	99	+	.	Parent=FBgn0037899.1.mrna1;Target=FBgn0037899.1 1 105 +
Chr2	stalkie_big_nohaplotig	exon	88275989	88276483	100	+	.	Parent=FBgn0037899.1.mrna1;Target=FBgn0037899.1 106 600 +
Chr2	stalkie_big_nohaplotig	CDS	88275776	88275880	.	+	0	Parent=FBgn0037899.1.mrna1;Target=FBgn0037899.1 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	88275989	88276483	.	+	0	Parent=FBgn0037899.1.mrna1;Target=FBgn0037899.1 106 600 +
Chr2	gffcl	locus	88276881	88279153	.	+	.	ID=RLOC_00019281;geneIDs=FBgn0037896.1.path1;transcripts=FBgn0037896.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88276881	88279153	.	+	.	ID=FBgn0037896.1.mrna1;geneID=FBgn0037896.1.path1;Name=FBgn0037896.1;Dir=sensecoverage=100.0;identity=99.7;matches=1815;mismatches=6;indels=0;unknowns=0;locus=RLOC_00019281
Chr2	stalkie_big_nohaplotig	exon	88276881	88276917	100	+	.	Parent=FBgn0037896.1.mrna1;Target=FBgn0037896.1 1 37 +
Chr2	stalkie_big_nohaplotig	exon	88276984	88277115	100	+	.	Parent=FBgn0037896.1.mrna1;Target=FBgn0037896.1 38 169 +
Chr2	stalkie_big_nohaplotig	exon	88277178	88277380	99	+	.	Parent=FBgn0037896.1.mrna1;Target=FBgn0037896.1 170 372 +
Chr2	stalkie_big_nohaplotig	exon	88277650	88278944	99	+	.	Parent=FBgn0037896.1.mrna1;Target=FBgn0037896.1 373 1667 +
Chr2	stalkie_big_nohaplotig	exon	88279000	88279153	100	+	.	Parent=FBgn0037896.1.mrna1;Target=FBgn0037896.1 1668 1821 +
Chr2	stalkie_big_nohaplotig	CDS	88276881	88276917	.	+	0	Parent=FBgn0037896.1.mrna1;Target=FBgn0037896.1 1 37 +
Chr2	stalkie_big_nohaplotig	CDS	88276984	88277115	.	+	2	Parent=FBgn0037896.1.mrna1;Target=FBgn0037896.1 38 169 +
Chr2	stalkie_big_nohaplotig	CDS	88277178	88277380	.	+	2	Parent=FBgn0037896.1.mrna1;Target=FBgn0037896.1 170 372 +
Chr2	stalkie_big_nohaplotig	CDS	88277650	88278944	.	+	0	Parent=FBgn0037896.1.mrna1;Target=FBgn0037896.1 373 1667 +
Chr2	stalkie_big_nohaplotig	CDS	88279000	88279153	.	+	1	Parent=FBgn0037896.1.mrna1;Target=FBgn0037896.1 1668 1821 +
Chr2	gffcl	locus	88289800	88297534	.	+	.	ID=RLOC_00019282;geneIDs=FBgn0037895.1.path1;transcripts=FBgn0037895.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88289800	88297534	.	+	.	ID=FBgn0037895.1.mrna1;geneID=FBgn0037895.1.path1;Name=FBgn0037895.1;Dir=sensecoverage=100.0;identity=99.9;matches=1787;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019282
Chr2	stalkie_big_nohaplotig	exon	88289800	88290174	100	+	.	Parent=FBgn0037895.1.mrna1;Target=FBgn0037895.1 1 375 +
Chr2	stalkie_big_nohaplotig	exon	88291870	88291935	100	+	.	Parent=FBgn0037895.1.mrna1;Target=FBgn0037895.1 376 441 +
Chr2	stalkie_big_nohaplotig	exon	88292010	88292129	100	+	.	Parent=FBgn0037895.1.mrna1;Target=FBgn0037895.1 442 561 +
Chr2	stalkie_big_nohaplotig	exon	88292544	88292698	100	+	.	Parent=FBgn0037895.1.mrna1;Target=FBgn0037895.1 562 716 +
Chr2	stalkie_big_nohaplotig	exon	88292765	88293014	99	+	.	Parent=FBgn0037895.1.mrna1;Target=FBgn0037895.1 717 966 +
Chr2	stalkie_big_nohaplotig	exon	88293909	88294289	100	+	.	Parent=FBgn0037895.1.mrna1;Target=FBgn0037895.1 967 1347 +
Chr2	stalkie_big_nohaplotig	exon	88295074	88295264	100	+	.	Parent=FBgn0037895.1.mrna1;Target=FBgn0037895.1 1348 1538 +
Chr2	stalkie_big_nohaplotig	exon	88297211	88297400	100	+	.	Parent=FBgn0037895.1.mrna1;Target=FBgn0037895.1 1539 1728 +
Chr2	stalkie_big_nohaplotig	exon	88297475	88297534	100	+	.	Parent=FBgn0037895.1.mrna1;Target=FBgn0037895.1 1729 1788 +
Chr2	stalkie_big_nohaplotig	CDS	88289800	88290174	.	+	0	Parent=FBgn0037895.1.mrna1;Target=FBgn0037895.1 1 375 +
Chr2	stalkie_big_nohaplotig	CDS	88291870	88291935	.	+	0	Parent=FBgn0037895.1.mrna1;Target=FBgn0037895.1 376 441 +
Chr2	stalkie_big_nohaplotig	CDS	88292010	88292129	.	+	0	Parent=FBgn0037895.1.mrna1;Target=FBgn0037895.1 442 561 +
Chr2	stalkie_big_nohaplotig	CDS	88292544	88292698	.	+	0	Parent=FBgn0037895.1.mrna1;Target=FBgn0037895.1 562 716 +
Chr2	stalkie_big_nohaplotig	CDS	88292765	88293014	.	+	1	Parent=FBgn0037895.1.mrna1;Target=FBgn0037895.1 717 966 +
Chr2	stalkie_big_nohaplotig	CDS	88293909	88294289	.	+	0	Parent=FBgn0037895.1.mrna1;Target=FBgn0037895.1 967 1347 +
Chr2	stalkie_big_nohaplotig	CDS	88295074	88295264	.	+	0	Parent=FBgn0037895.1.mrna1;Target=FBgn0037895.1 1348 1538 +
Chr2	stalkie_big_nohaplotig	CDS	88297211	88297400	.	+	1	Parent=FBgn0037895.1.mrna1;Target=FBgn0037895.1 1539 1728 +
Chr2	stalkie_big_nohaplotig	CDS	88297475	88297534	.	+	0	Parent=FBgn0037895.1.mrna1;Target=FBgn0037895.1 1729 1788 +
Chr2	gffcl	locus	88307215	88307836	.	-	.	ID=RLOC_00019283;geneIDs=comp148545_c0_seq1.path1;transcripts=comp148545_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88307215	88307836	.	-	.	ID=comp148545_c0_seq1.mrna1;geneID=comp148545_c0_seq1.path1;Name=comp148545_c0_seq1;Dir=indeterminatecoverage=92.7;identity=99.7;matches=622;mismatches=0;indels=2;unknowns=0;Target=comp148545_c0_seq1 646 23 .;CDS_Target=comp148545_c0_seq1 241 23 .;locus=RLOC_00019283
Chr2	stalkie_big_nohaplotig	exon	88307215	88307836	99	-	.	Parent=comp148545_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88307620	88307836	.	-	0	Parent=comp148545_c0_seq1.mrna1
Chr2	gffcl	locus	88324968	88326583	.	+	.	ID=RLOC_00019284;geneIDs=FBgn0031483.2.path2;transcripts=FBgn0031483.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	88324968	88326583	.	+	.	ID=FBgn0031483.2.mrna2;geneID=FBgn0031483.2.path2;Name=FBgn0031483.2;Dir=indeterminatecoverage=100.0;identity=98.1;matches=1586;mismatches=9;indels=22;unknowns=0;Target=FBgn0031483.2 1596 1 .;locus=RLOC_00019284
Chr2	stalkie_big_nohaplotig	exon	88324968	88326583	98	+	.	Parent=FBgn0031483.2.mrna2
Chr2	stalkie_big_nohaplotig	CDS	88324968	88326583	.	+	0	Parent=FBgn0031483.2.mrna2
Chr2	gffcl	locus	88359230	88359361	.	-	.	ID=RLOC_00019285;geneIDs=FBgn0038422.1.path1;transcripts=FBgn0038422.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88359230	88359361	.	-	.	ID=FBgn0038422.1.mrna1;geneID=FBgn0038422.1.path1;Name=FBgn0038422.1;Dir=indeterminatecoverage=5.8;identity=100.0;matches=132;mismatches=0;indels=0;unknowns=0;Target=FBgn0038422.1 132 1 .;locus=RLOC_00019285
Chr2	stalkie_big_nohaplotig	exon	88359230	88359361	100	-	.	Parent=FBgn0038422.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88359230	88359361	.	-	0	Parent=FBgn0038422.1.mrna1
Chr2	gffcl	locus	88390708	88391559	.	+	.	ID=RLOC_00019287;geneIDs=comp60082_c0_seq1.path1;transcripts=comp60082_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88390708	88391559	.	+	.	ID=comp60082_c0_seq1.mrna1;geneID=comp60082_c0_seq1.path1;Name=comp60082_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=786;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019287
Chr2	stalkie_big_nohaplotig	exon	88390708	88390771	100	+	.	Parent=comp60082_c0_seq1.mrna1;Target=comp60082_c0_seq1 724 787 -
Chr2	stalkie_big_nohaplotig	exon	88390837	88391559	99	+	.	Parent=comp60082_c0_seq1.mrna1;Target=comp60082_c0_seq1 1 723 -
Chr2	stalkie_big_nohaplotig	CDS	88390709	88390771	.	+	0	Parent=comp60082_c0_seq1.mrna1;Target=comp60082_c0_seq1 724 786 .
Chr2	stalkie_big_nohaplotig	CDS	88390837	88391103	.	+	0	Parent=comp60082_c0_seq1.mrna1;Target=comp60082_c0_seq1 457 723 .
Chr2	gffcl	locus	88392064	88392355	.	+	.	ID=RLOC_00019288;geneIDs=comp79123_c0_seq1.path1;transcripts=comp79123_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88392064	88392355	.	+	.	ID=comp79123_c0_seq1.mrna1;geneID=comp79123_c0_seq1.path1;Name=comp79123_c0_seq1;Dir=indeterminatecoverage=99.7;identity=95.5;matches=279;mismatches=13;indels=0;unknowns=0;Target=comp79123_c0_seq1 292 1 .;CDS_Target=comp79123_c0_seq1 204 124 .;locus=RLOC_00019288
Chr2	stalkie_big_nohaplotig	exon	88392064	88392355	95	+	.	Parent=comp79123_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88392187	88392267	.	+	0	Parent=comp79123_c0_seq1.mrna1
Chr2	gffcl	locus	88416147	88416525	.	-	.	ID=RLOC_00019289;geneIDs=comp141267_c0_seq1.path1;transcripts=comp141267_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88416147	88416525	.	-	.	ID=comp141267_c0_seq1.mrna1;geneID=comp141267_c0_seq1.path1;Name=comp141267_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=379;mismatches=0;indels=0;unknowns=0;Target=comp141267_c0_seq1 379 1 .;CDS_Target=comp141267_c0_seq1 83 3 .;locus=RLOC_00019289
Chr2	stalkie_big_nohaplotig	exon	88416147	88416525	100	-	.	Parent=comp141267_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88416443	88416523	.	-	0	Parent=comp141267_c0_seq1.mrna1
Chr2	gffcl	locus	88417069	88799619	.	.	.	ID=RLOC_00019290;geneIDs=FBgn0262081.1.path1,comp155490_c1_seq1.path1,comp156945_c1_seq1.path1;transcripts=comp155490_c1_seq1.mrna1,comp156945_c1_seq1.mrna1,FBgn0262081.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88417069	88799619	.	-	.	ID=comp155490_c1_seq1.mrna1;geneID=comp155490_c1_seq1.path1;Name=comp155490_c1_seq1;Dir=sensecoverage=80.5;identity=99.8;matches=2563;mismatches=5;indels=0;unknowns=0;locus=RLOC_00019290
Chr2	stalkie_big_nohaplotig	exon	88417069	88417086	83	-	.	Parent=comp155490_c1_seq1.mrna1;Target=comp155490_c1_seq1 2598 2615 +
Chr2	stalkie_big_nohaplotig	exon	88763202	88763207	100	-	.	Parent=comp155490_c1_seq1.mrna1;Target=comp155490_c1_seq1 2592 2597 +
Chr2	stalkie_big_nohaplotig	exon	88763563	88763571	88	-	.	Parent=comp155490_c1_seq1.mrna1;Target=comp155490_c1_seq1 2583 2591 +
Chr2	stalkie_big_nohaplotig	exon	88771102	88771114	92	-	.	Parent=comp155490_c1_seq1.mrna1;Target=comp155490_c1_seq1 2522 2534 +
Chr2	stalkie_big_nohaplotig	exon	88771352	88771639	100	-	.	Parent=comp155490_c1_seq1.mrna1;Target=comp155490_c1_seq1 2234 2521 +
Chr2	stalkie_big_nohaplotig	exon	88771705	88772396	100	-	.	Parent=comp155490_c1_seq1.mrna1;Target=comp155490_c1_seq1 1542 2233 +
Chr2	stalkie_big_nohaplotig	exon	88792008	88793206	100	-	.	Parent=comp155490_c1_seq1.mrna1;Target=comp155490_c1_seq1 343 1541 +
Chr2	stalkie_big_nohaplotig	exon	88799278	88799619	100	-	.	Parent=comp155490_c1_seq1.mrna1;Target=comp155490_c1_seq1 1 342 +
Chr2	stalkie_big_nohaplotig	CDS	88771109	88771114	.	-	0	Parent=comp155490_c1_seq1.mrna1;Target=comp155490_c1_seq1 2522 2527 +
Chr2	stalkie_big_nohaplotig	CDS	88771352	88771639	.	-	0	Parent=comp155490_c1_seq1.mrna1;Target=comp155490_c1_seq1 2234 2521 +
Chr2	stalkie_big_nohaplotig	CDS	88771705	88772396	.	-	2	Parent=comp155490_c1_seq1.mrna1;Target=comp155490_c1_seq1 1542 2233 +
Chr2	stalkie_big_nohaplotig	CDS	88792008	88793088	.	-	0	Parent=comp155490_c1_seq1.mrna1;Target=comp155490_c1_seq1 461 1541 +
Chr2	stalkie_big_nohaplotig	mRNA	88763366	88763913	.	+	.	ID=comp156945_c1_seq1.mrna1;geneID=comp156945_c1_seq1.path1;Name=comp156945_c1_seq1;Dir=indeterminatecoverage=100.0;identity=93.7;matches=548;mismatches=0;indels=37;unknowns=0;Target=comp156945_c1_seq1 585 1 .;CDS_Target=comp156945_c1_seq1 341 177 .;locus=RLOC_00019290
Chr2	stalkie_big_nohaplotig	exon	88763366	88763913	93	+	.	Parent=comp156945_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88763505	88763669	.	+	0	Parent=comp156945_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88770953	88793121	.	-	.	ID=FBgn0262081.1.mrna1;geneID=FBgn0262081.1.path1;Name=FBgn0262081.1;Dir=sensecoverage=100.0;identity=100.0;matches=2493;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019290
Chr2	stalkie_big_nohaplotig	exon	88770953	88771639	100	-	.	Parent=FBgn0262081.1.mrna1;Target=FBgn0262081.1 1807 2493 +
Chr2	stalkie_big_nohaplotig	exon	88771705	88772396	100	-	.	Parent=FBgn0262081.1.mrna1;Target=FBgn0262081.1 1115 1806 +
Chr2	stalkie_big_nohaplotig	exon	88792008	88793121	100	-	.	Parent=FBgn0262081.1.mrna1;Target=FBgn0262081.1 1 1114 +
Chr2	stalkie_big_nohaplotig	CDS	88770953	88771639	.	-	0	Parent=FBgn0262081.1.mrna1;Target=FBgn0262081.1 1807 2493 +
Chr2	stalkie_big_nohaplotig	CDS	88771705	88772396	.	-	2	Parent=FBgn0262081.1.mrna1;Target=FBgn0262081.1 1115 1806 +
Chr2	stalkie_big_nohaplotig	CDS	88792008	88793121	.	-	0	Parent=FBgn0262081.1.mrna1;Target=FBgn0262081.1 1 1114 +
Chr2	gffcl	locus	88454215	88455809	.	-	.	ID=RLOC_00019291;geneIDs=FBgn0031483.2.path1;transcripts=FBgn0031483.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88454215	88455809	.	-	.	ID=FBgn0031483.2.mrna1;geneID=FBgn0031483.2.path1;Name=FBgn0031483.2;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1582;mismatches=13;indels=1;unknowns=0;Target=FBgn0031483.2 1596 1 .;locus=RLOC_00019291
Chr2	stalkie_big_nohaplotig	exon	88454215	88455809	99	-	.	Parent=FBgn0031483.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88454215	88455809	.	-	0	Parent=FBgn0031483.2.mrna1
Chr2	gffcl	locus	88456598	88459275	.	+	.	ID=RLOC_00019292;geneIDs=FBgn0038422.1.path2;transcripts=FBgn0038422.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	88456598	88459275	.	+	.	ID=FBgn0038422.1.mrna2;geneID=FBgn0038422.1.path2;Name=FBgn0038422.1;Dir=sensecoverage=94.2;identity=100.0;matches=2157;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019292
Chr2	stalkie_big_nohaplotig	exon	88456598	88456699	100	+	.	Parent=FBgn0038422.1.mrna2;Target=FBgn0038422.1 133 234 +
Chr2	stalkie_big_nohaplotig	exon	88456981	88457131	100	+	.	Parent=FBgn0038422.1.mrna2;Target=FBgn0038422.1 235 385 +
Chr2	stalkie_big_nohaplotig	exon	88457316	88457437	100	+	.	Parent=FBgn0038422.1.mrna2;Target=FBgn0038422.1 386 507 +
Chr2	stalkie_big_nohaplotig	exon	88457494	88459275	100	+	.	Parent=FBgn0038422.1.mrna2;Target=FBgn0038422.1 508 2289 +
Chr2	stalkie_big_nohaplotig	CDS	88456598	88456699	.	+	0	Parent=FBgn0038422.1.mrna2;Target=FBgn0038422.1 133 234 +
Chr2	stalkie_big_nohaplotig	CDS	88456981	88457131	.	+	0	Parent=FBgn0038422.1.mrna2;Target=FBgn0038422.1 235 385 +
Chr2	stalkie_big_nohaplotig	CDS	88457316	88457437	.	+	2	Parent=FBgn0038422.1.mrna2;Target=FBgn0038422.1 386 507 +
Chr2	stalkie_big_nohaplotig	CDS	88457494	88459275	.	+	0	Parent=FBgn0038422.1.mrna2;Target=FBgn0038422.1 508 2289 +
Chr2	gffcl	locus	88459812	88460183	.	+	.	ID=RLOC_00019293;geneIDs=comp147730_c0_seq1.path1;transcripts=comp147730_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88459812	88460183	.	+	.	ID=comp147730_c0_seq1.mrna1;geneID=comp147730_c0_seq1.path1;Name=comp147730_c0_seq1;Dir=indeterminatecoverage=86.9;identity=90.1;matches=317;mismatches=15;indels=20;unknowns=0;Target=comp147730_c0_seq1 365 300 .;locus=RLOC_00019293
Chr2	stalkie_big_nohaplotig	exon	88459812	88459937	95	+	.	Parent=comp147730_c0_seq1.mrna1;Target=comp147730_c0_seq1 126 1 .
Chr2	stalkie_big_nohaplotig	exon	88459978	88460183	87	+	.	Parent=comp147730_c0_seq1.mrna1;Target=comp147730_c0_seq1 365 140 .
Chr2	stalkie_big_nohaplotig	CDS	88460118	88460183	.	+	0	Parent=comp147730_c0_seq1.mrna1
Chr2	gffcl	locus	88463683	88467139	.	-	.	ID=RLOC_00019294;geneIDs=FBgn0039751.1.path1;transcripts=FBgn0039751.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88463683	88467139	.	-	.	ID=FBgn0039751.1.mrna1;geneID=FBgn0039751.1.path1;Name=FBgn0039751.1;Dir=sensecoverage=100.0;identity=99.2;matches=744;mismatches=6;indels=0;unknowns=0;locus=RLOC_00019294
Chr2	stalkie_big_nohaplotig	exon	88463683	88463742	100	-	.	Parent=FBgn0039751.1.mrna1;Target=FBgn0039751.1 691 750 +
Chr2	stalkie_big_nohaplotig	exon	88463800	88464041	98	-	.	Parent=FBgn0039751.1.mrna1;Target=FBgn0039751.1 449 690 +
Chr2	stalkie_big_nohaplotig	exon	88464104	88464251	98	-	.	Parent=FBgn0039751.1.mrna1;Target=FBgn0039751.1 301 448 +
Chr2	stalkie_big_nohaplotig	exon	88466730	88466942	100	-	.	Parent=FBgn0039751.1.mrna1;Target=FBgn0039751.1 88 300 +
Chr2	stalkie_big_nohaplotig	exon	88467053	88467139	100	-	.	Parent=FBgn0039751.1.mrna1;Target=FBgn0039751.1 1 87 +
Chr2	stalkie_big_nohaplotig	CDS	88463683	88463742	.	-	0	Parent=FBgn0039751.1.mrna1;Target=FBgn0039751.1 691 750 +
Chr2	stalkie_big_nohaplotig	CDS	88463800	88464041	.	-	2	Parent=FBgn0039751.1.mrna1;Target=FBgn0039751.1 449 690 +
Chr2	stalkie_big_nohaplotig	CDS	88464104	88464251	.	-	0	Parent=FBgn0039751.1.mrna1;Target=FBgn0039751.1 301 448 +
Chr2	stalkie_big_nohaplotig	CDS	88466730	88466942	.	-	0	Parent=FBgn0039751.1.mrna1;Target=FBgn0039751.1 88 300 +
Chr2	stalkie_big_nohaplotig	CDS	88467053	88467139	.	-	0	Parent=FBgn0039751.1.mrna1;Target=FBgn0039751.1 1 87 +
Chr2	gffcl	locus	88468545	89316475	.	+	.	ID=RLOC_00019295;geneIDs=comp130793_c0_seq1.path1;transcripts=comp130793_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88468545	89316475	.	+	.	ID=comp130793_c0_seq1.mrna1;geneID=comp130793_c0_seq1.path1;Name=comp130793_c0_seq1;Dir=indeterminatecoverage=89.7;identity=100.0;matches=542;mismatches=0;indels=0;unknowns=0;Target=comp130793_c0_seq1 407 342 .;locus=RLOC_00019295
Chr2	stalkie_big_nohaplotig	exon	88468545	88469049	100	+	.	Parent=comp130793_c0_seq1.mrna1;Target=comp130793_c0_seq1 525 21 .
Chr2	stalkie_big_nohaplotig	exon	89282091	89282095	100	+	.	Parent=comp130793_c0_seq1.mrna1;Target=comp130793_c0_seq1 530 526 .
Chr2	stalkie_big_nohaplotig	exon	89286729	89286731	100	+	.	Parent=comp130793_c0_seq1.mrna1;Target=comp130793_c0_seq1 533 531 .
Chr2	stalkie_big_nohaplotig	exon	89293363	89293367	100	+	.	Parent=comp130793_c0_seq1.mrna1;Target=comp130793_c0_seq1 538 534 .
Chr2	stalkie_big_nohaplotig	exon	89304352	89304354	100	+	.	Parent=comp130793_c0_seq1.mrna1;Target=comp130793_c0_seq1 541 539 .
Chr2	stalkie_big_nohaplotig	exon	89308589	89308591	100	+	.	Parent=comp130793_c0_seq1.mrna1;Target=comp130793_c0_seq1 544 542 .
Chr2	stalkie_big_nohaplotig	exon	89311874	89311882	100	+	.	Parent=comp130793_c0_seq1.mrna1;Target=comp130793_c0_seq1 553 545 .
Chr2	stalkie_big_nohaplotig	exon	89316467	89316475	100	+	.	Parent=comp130793_c0_seq1.mrna1;Target=comp130793_c0_seq1 566 558 .
Chr2	stalkie_big_nohaplotig	CDS	88468866	88468931	.	+	0	Parent=comp130793_c0_seq1.mrna1
Chr2	gffcl	locus	88469066	88631723	.	-	.	ID=RLOC_00019296;geneIDs=FBgn0261015.1.path1,comp162215_c2_seq1.path1;transcripts=comp162215_c2_seq1.mrna1,FBgn0261015.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88469066	88501728	.	-	.	ID=comp162215_c2_seq1.mrna1;geneID=comp162215_c2_seq1.path1;Name=comp162215_c2_seq1;Dir=sensecoverage=83.9;identity=84.6;matches=5352;mismatches=236;indels=741;unknowns=0;locus=RLOC_00019296
Chr2	stalkie_big_nohaplotig	exon	88469066	88469925	99	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 9793 10653 +
Chr2	stalkie_big_nohaplotig	exon	88469987	88470124	100	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 9655 9792 +
Chr2	stalkie_big_nohaplotig	exon	88470225	88470299	100	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 9580 9654 +
Chr2	stalkie_big_nohaplotig	exon	88470476	88473765	90	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 6013 9579 +
Chr2	stalkie_big_nohaplotig	exon	88473905	88473985	39	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 5659 5707 +
Chr2	stalkie_big_nohaplotig	exon	88476015	88476030	87	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 5643 5658 +
Chr2	stalkie_big_nohaplotig	exon	88477411	88477420	100	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 5633 5642 +
Chr2	stalkie_big_nohaplotig	exon	88479198	88479201	100	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 5629 5632 +
Chr2	stalkie_big_nohaplotig	exon	88481536	88481544	100	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 5620 5628 +
Chr2	stalkie_big_nohaplotig	exon	88481655	88481663	100	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 5047 5055 +
Chr2	stalkie_big_nohaplotig	exon	88481766	88481774	100	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 4853 4861 +
Chr2	stalkie_big_nohaplotig	exon	88482054	88482062	100	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 4283 4291 +
Chr2	stalkie_big_nohaplotig	exon	88482118	88482253	45	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 4034 4194 +
Chr2	stalkie_big_nohaplotig	exon	88482421	88482429	100	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 3880 3888 +
Chr2	stalkie_big_nohaplotig	exon	88482480	88482487	100	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 3716 3723 +
Chr2	stalkie_big_nohaplotig	exon	88482547	88482683	50	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 3260 3382 +
Chr2	stalkie_big_nohaplotig	exon	88482692	88482830	31	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 2777 3097 +
Chr2	stalkie_big_nohaplotig	exon	88482876	88482884	100	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 2578 2586 +
Chr2	stalkie_big_nohaplotig	exon	88482921	88482933	100	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 2327 2339 +
Chr2	stalkie_big_nohaplotig	exon	88483624	88483631	100	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 2275 2282 +
Chr2	stalkie_big_nohaplotig	exon	88487718	88487728	40	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 2222 2248 +
Chr2	stalkie_big_nohaplotig	exon	88487891	88487903	84	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 2209 2221 +
Chr2	stalkie_big_nohaplotig	exon	88488953	88488989	68	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 2165 2208 +
Chr2	stalkie_big_nohaplotig	exon	88489070	88489205	30	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 2116 2164 +
Chr2	stalkie_big_nohaplotig	exon	88489265	88489271	100	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 2109 2115 +
Chr2	stalkie_big_nohaplotig	exon	88489533	88489543	81	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 2098 2108 +
Chr2	stalkie_big_nohaplotig	exon	88490410	88490472	52	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 2032 2097 +
Chr2	stalkie_big_nohaplotig	exon	88491486	88491500	86	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 2006 2020 +
Chr2	stalkie_big_nohaplotig	exon	88492522	88492531	100	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 1996 2005 +
Chr2	stalkie_big_nohaplotig	exon	88493111	88493139	53	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 1955 1995 +
Chr2	stalkie_big_nohaplotig	exon	88493255	88493266	100	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 1922 1933 +
Chr2	stalkie_big_nohaplotig	exon	88494493	88494497	100	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 1917 1921 +
Chr2	stalkie_big_nohaplotig	exon	88495261	88495268	100	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 1909 1916 +
Chr2	stalkie_big_nohaplotig	exon	88495874	88495879	100	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 1903 1908 +
Chr2	stalkie_big_nohaplotig	exon	88498997	88499002	100	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 1897 1902 +
Chr2	stalkie_big_nohaplotig	exon	88499061	88499080	61	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 1866 1896 +
Chr2	stalkie_big_nohaplotig	exon	88500950	88500993	51	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 1825 1865 +
Chr2	stalkie_big_nohaplotig	exon	88501373	88501728	98	-	.	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 1470 1824 +
Chr2	stalkie_big_nohaplotig	CDS	88469608	88469925	.	-	0	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 9793 10110 +
Chr2	stalkie_big_nohaplotig	CDS	88469987	88470124	.	-	0	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 9655 9792 +
Chr2	stalkie_big_nohaplotig	CDS	88470225	88470299	.	-	0	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 9580 9654 +
Chr2	stalkie_big_nohaplotig	CDS	88470476	88473694	.	-	0	Parent=comp162215_c2_seq1.mrna1;Target=comp162215_c2_seq1 6361 9579 +
Chr2	stalkie_big_nohaplotig	mRNA	88478022	88631723	.	-	.	ID=FBgn0261015.1.mrna1;geneID=FBgn0261015.1.path1;Name=FBgn0261015.1;Dir=sensecoverage=100.0;identity=99.5;matches=5709;mismatches=6;indels=21;unknowns=0;locus=RLOC_00019296
Chr2	stalkie_big_nohaplotig	exon	88478022	88478165	100	-	.	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 5578 5721 +
Chr2	stalkie_big_nohaplotig	exon	88478326	88479528	99	-	.	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 4369 5577 +
Chr2	stalkie_big_nohaplotig	exon	88479591	88481507	100	-	.	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 2452 4368 +
Chr2	stalkie_big_nohaplotig	exon	88481765	88481962	100	-	.	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 2254 2451 +
Chr2	stalkie_big_nohaplotig	exon	88482032	88482244	100	-	.	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 2041 2253 +
Chr2	stalkie_big_nohaplotig	exon	88512836	88512988	100	-	.	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 1888 2040 +
Chr2	stalkie_big_nohaplotig	exon	88514805	88514939	100	-	.	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 1753 1887 +
Chr2	stalkie_big_nohaplotig	exon	88517107	88517208	100	-	.	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 1651 1752 +
Chr2	stalkie_big_nohaplotig	exon	88517276	88517632	95	-	.	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 1309 1650 +
Chr2	stalkie_big_nohaplotig	exon	88620147	88620389	100	-	.	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 1066 1308 +
Chr2	stalkie_big_nohaplotig	exon	88626403	88626516	100	-	.	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 952 1065 +
Chr2	stalkie_big_nohaplotig	exon	88630643	88630889	100	-	.	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 705 951 +
Chr2	stalkie_big_nohaplotig	exon	88631020	88631723	100	-	.	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 1 704 +
Chr2	stalkie_big_nohaplotig	CDS	88478022	88478165	.	-	0	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 5578 5721 +
Chr2	stalkie_big_nohaplotig	CDS	88478326	88479528	.	-	0	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 4369 5577 +
Chr2	stalkie_big_nohaplotig	CDS	88479591	88481507	.	-	0	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 2452 4368 +
Chr2	stalkie_big_nohaplotig	CDS	88481765	88481962	.	-	0	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 2254 2451 +
Chr2	stalkie_big_nohaplotig	CDS	88482032	88482244	.	-	0	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 2041 2253 +
Chr2	stalkie_big_nohaplotig	CDS	88512836	88512988	.	-	0	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 1888 2040 +
Chr2	stalkie_big_nohaplotig	CDS	88514805	88514939	.	-	0	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 1753 1887 +
Chr2	stalkie_big_nohaplotig	CDS	88517107	88517208	.	-	0	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 1651 1752 +
Chr2	stalkie_big_nohaplotig	CDS	88517276	88517632	.	-	0	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 1309 1650 +
Chr2	stalkie_big_nohaplotig	CDS	88620147	88620389	.	-	0	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 1066 1308 +
Chr2	stalkie_big_nohaplotig	CDS	88626403	88626516	.	-	0	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 952 1065 +
Chr2	stalkie_big_nohaplotig	CDS	88630643	88630889	.	-	1	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 705 951 +
Chr2	stalkie_big_nohaplotig	CDS	88631020	88631723	.	-	0	Parent=FBgn0261015.1.mrna1;Target=FBgn0261015.1 1 704 +
Chr2	gffcl	locus	88474109	88475539	.	-	.	ID=RLOC_00019297;geneIDs=FBgn0053191.1.path1;transcripts=FBgn0053191.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88474109	88475539	.	-	.	ID=FBgn0053191.1.mrna1;geneID=FBgn0053191.1.path1;Name=FBgn0053191.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1429;mismatches=2;indels=0;unknowns=0;Target=FBgn0053191.1 1431 1 .;locus=RLOC_00019297
Chr2	stalkie_big_nohaplotig	exon	88474109	88475539	99	-	.	Parent=FBgn0053191.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88474109	88475539	.	-	0	Parent=FBgn0053191.1.mrna1
Chr2	gffcl	locus	88590042	88590418	.	+	.	ID=RLOC_00019298;geneIDs=comp145545_c0_seq1.path1;transcripts=comp145545_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88590042	88590418	.	+	.	ID=comp145545_c0_seq1.mrna1;geneID=comp145545_c0_seq1.path1;Name=comp145545_c0_seq1;Dir=indeterminatecoverage=94.3;identity=95.7;matches=377;mismatches=0;indels=17;unknowns=0;Target=comp145545_c0_seq1 394 1 .;CDS_Target=comp145545_c0_seq1 300 1 .;locus=RLOC_00019298
Chr2	stalkie_big_nohaplotig	exon	88590042	88590418	95	+	.	Parent=comp145545_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88590042	88590341	.	+	0	Parent=comp145545_c0_seq1.mrna1
Chr2	gffcl	locus	88618700	88622679	.	+	.	ID=RLOC_00019299;geneIDs=comp159683_c0_seq1.path1;transcripts=comp159683_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88618700	88622679	.	+	.	ID=comp159683_c0_seq1.mrna1;geneID=comp159683_c0_seq1.path1;Name=comp159683_c0_seq1;Dir=sensecoverage=100.0;identity=99.0;matches=1266;mismatches=13;indels=0;unknowns=0;locus=RLOC_00019299
Chr2	stalkie_big_nohaplotig	exon	88618700	88618866	97	+	.	Parent=comp159683_c0_seq1.mrna1;Target=comp159683_c0_seq1 1 167 +
Chr2	stalkie_big_nohaplotig	exon	88621476	88621623	99	+	.	Parent=comp159683_c0_seq1.mrna1;Target=comp159683_c0_seq1 168 315 +
Chr2	stalkie_big_nohaplotig	exon	88621716	88622679	99	+	.	Parent=comp159683_c0_seq1.mrna1;Target=comp159683_c0_seq1 316 1279 +
Chr2	stalkie_big_nohaplotig	CDS	88621507	88621623	.	+	0	Parent=comp159683_c0_seq1.mrna1;Target=comp159683_c0_seq1 199 315 +
Chr2	stalkie_big_nohaplotig	CDS	88621716	88621904	.	+	0	Parent=comp159683_c0_seq1.mrna1;Target=comp159683_c0_seq1 316 504 +
Chr2	gffcl	locus	88632117	88637619	.	-	.	ID=RLOC_00019300;geneIDs=comp118359_c0_seq1.path1;transcripts=comp118359_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88632117	88637619	.	-	.	ID=comp118359_c0_seq1.mrna1;geneID=comp118359_c0_seq1.path1;Name=comp118359_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=537;mismatches=1;indels=0;unknowns=0;Target=comp118359_c0_seq1 423 536 .;locus=RLOC_00019300
Chr2	stalkie_big_nohaplotig	exon	88632117	88632137	100	-	.	Parent=comp118359_c0_seq1.mrna1;Target=comp118359_c0_seq1 1 21 -
Chr2	stalkie_big_nohaplotig	exon	88637103	88637619	99	-	.	Parent=comp118359_c0_seq1.mrna1;Target=comp118359_c0_seq1 22 538 -
Chr2	stalkie_big_nohaplotig	CDS	88637504	88637617	.	-	0	Parent=comp118359_c0_seq1.mrna1
Chr2	gffcl	locus	88656787	88657098	.	-	.	ID=RLOC_00019301;geneIDs=comp1305838_c0_seq1.path1;transcripts=comp1305838_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88656787	88657098	.	-	.	ID=comp1305838_c0_seq1.mrna1;geneID=comp1305838_c0_seq1.path1;Name=comp1305838_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=311;mismatches=1;indels=0;unknowns=0;Target=comp1305838_c0_seq1 312 1 .;CDS_Target=comp1305838_c0_seq1 81 1 .;locus=RLOC_00019301
Chr2	stalkie_big_nohaplotig	exon	88656787	88657098	99	-	.	Parent=comp1305838_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88657018	88657098	.	-	0	Parent=comp1305838_c0_seq1.mrna1
Chr2	gffcl	locus	88672578	88672948	.	-	.	ID=RLOC_00019302;geneIDs=comp150850_c2_seq1.path1;transcripts=comp150850_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88672578	88672948	.	-	.	ID=comp150850_c2_seq1.mrna1;geneID=comp150850_c2_seq1.path1;Name=comp150850_c2_seq1;Dir=indeterminatecoverage=99.7;identity=97.9;matches=366;mismatches=5;indels=3;unknowns=0;Target=comp150850_c2_seq1 374 1 .;CDS_Target=comp150850_c2_seq1 112 2 .;locus=RLOC_00019302
Chr2	stalkie_big_nohaplotig	exon	88672578	88672948	97	-	.	Parent=comp150850_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88672837	88672947	.	-	0	Parent=comp150850_c2_seq1.mrna1
Chr2	gffcl	locus	88673000	88674876	.	+	.	ID=RLOC_00019303;geneIDs=FBgn0003884.2.path1;transcripts=FBgn0003884.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88673000	88674876	.	+	.	ID=FBgn0003884.2.mrna1;geneID=FBgn0003884.2.path1;Name=FBgn0003884.2;Dir=sensecoverage=100.0;identity=100.0;matches=1371;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019303
Chr2	stalkie_big_nohaplotig	exon	88673000	88673023	100	+	.	Parent=FBgn0003884.2.mrna1;Target=FBgn0003884.2 1 24 +
Chr2	stalkie_big_nohaplotig	exon	88673530	88674876	100	+	.	Parent=FBgn0003884.2.mrna1;Target=FBgn0003884.2 25 1371 +
Chr2	stalkie_big_nohaplotig	CDS	88673000	88673023	.	+	0	Parent=FBgn0003884.2.mrna1;Target=FBgn0003884.2 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	88673530	88674876	.	+	0	Parent=FBgn0003884.2.mrna1;Target=FBgn0003884.2 25 1371 +
Chr2	gffcl	locus	88682899	88683308	.	+	.	ID=RLOC_00019304;geneIDs=FBgn0000618.1.path1;transcripts=FBgn0000618.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88682899	88683308	.	+	.	ID=FBgn0000618.1.mrna1;geneID=FBgn0000618.1.path1;Name=FBgn0000618.1;Dir=sensecoverage=100.0;identity=100.0;matches=282;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019304
Chr2	stalkie_big_nohaplotig	exon	88682899	88682957	100	+	.	Parent=FBgn0000618.1.mrna1;Target=FBgn0000618.1 1 59 +
Chr2	stalkie_big_nohaplotig	exon	88683020	88683101	100	+	.	Parent=FBgn0000618.1.mrna1;Target=FBgn0000618.1 60 141 +
Chr2	stalkie_big_nohaplotig	exon	88683168	88683308	100	+	.	Parent=FBgn0000618.1.mrna1;Target=FBgn0000618.1 142 282 +
Chr2	stalkie_big_nohaplotig	CDS	88682899	88682957	.	+	0	Parent=FBgn0000618.1.mrna1;Target=FBgn0000618.1 1 59 +
Chr2	stalkie_big_nohaplotig	CDS	88683020	88683101	.	+	1	Parent=FBgn0000618.1.mrna1;Target=FBgn0000618.1 60 141 +
Chr2	stalkie_big_nohaplotig	CDS	88683168	88683308	.	+	0	Parent=FBgn0000618.1.mrna1;Target=FBgn0000618.1 142 282 +
Chr2	gffcl	locus	88684785	88685376	.	+	.	ID=RLOC_00019305;geneIDs=comp150277_c1_seq1.path1;transcripts=comp150277_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88684785	88685376	.	+	.	ID=comp150277_c1_seq1.mrna1;geneID=comp150277_c1_seq1.path1;Name=comp150277_c1_seq1;Dir=indeterminatecoverage=100.0;identity=84.2;matches=542;mismatches=50;indels=52;unknowns=0;Target=comp150277_c1_seq1 644 1 .;CDS_Target=comp150277_c1_seq1 127 116 .;locus=RLOC_00019305
Chr2	stalkie_big_nohaplotig	exon	88684785	88685376	84	+	.	Parent=comp150277_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88684896	88684907	.	+	0	Parent=comp150277_c1_seq1.mrna1
Chr2	gffcl	locus	88685709	88687392	.	+	.	ID=RLOC_00019306;geneIDs=comp1091216_c0_seq1.path1;transcripts=comp1091216_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88685709	88687392	.	+	.	ID=comp1091216_c0_seq1.mrna1;geneID=comp1091216_c0_seq1.path1;Name=comp1091216_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=1631;mismatches=0;indels=0;unknowns=0;Target=comp1091216_c0_seq1 3 239 +;locus=RLOC_00019306
Chr2	stalkie_big_nohaplotig	exon	88685709	88686476	100	+	.	Parent=comp1091216_c0_seq1.mrna1;Target=comp1091216_c0_seq1 1 768 +
Chr2	stalkie_big_nohaplotig	exon	88686530	88687392	100	+	.	Parent=comp1091216_c0_seq1.mrna1;Target=comp1091216_c0_seq1 769 1631 +
Chr2	stalkie_big_nohaplotig	CDS	88685711	88685947	.	+	0	Parent=comp1091216_c0_seq1.mrna1
Chr2	gffcl	locus	88687575	88692237	.	-	.	ID=RLOC_00019307;geneIDs=FBgn0052557.1.path1;transcripts=FBgn0052557.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88687575	88692237	.	-	.	ID=FBgn0052557.1.mrna1;geneID=FBgn0052557.1.path1;Name=FBgn0052557.1;Dir=sensecoverage=100.0;identity=100.0;matches=1974;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019307
Chr2	stalkie_big_nohaplotig	exon	88687575	88687826	100	-	.	Parent=FBgn0052557.1.mrna1;Target=FBgn0052557.1 1723 1974 +
Chr2	stalkie_big_nohaplotig	exon	88687888	88688322	100	-	.	Parent=FBgn0052557.1.mrna1;Target=FBgn0052557.1 1288 1722 +
Chr2	stalkie_big_nohaplotig	exon	88688389	88688511	100	-	.	Parent=FBgn0052557.1.mrna1;Target=FBgn0052557.1 1165 1287 +
Chr2	stalkie_big_nohaplotig	exon	88688655	88688833	100	-	.	Parent=FBgn0052557.1.mrna1;Target=FBgn0052557.1 986 1164 +
Chr2	stalkie_big_nohaplotig	exon	88688889	88689191	100	-	.	Parent=FBgn0052557.1.mrna1;Target=FBgn0052557.1 683 985 +
Chr2	stalkie_big_nohaplotig	exon	88689408	88689965	100	-	.	Parent=FBgn0052557.1.mrna1;Target=FBgn0052557.1 125 682 +
Chr2	stalkie_big_nohaplotig	exon	88692114	88692237	100	-	.	Parent=FBgn0052557.1.mrna1;Target=FBgn0052557.1 1 124 +
Chr2	stalkie_big_nohaplotig	CDS	88687575	88687826	.	-	0	Parent=FBgn0052557.1.mrna1;Target=FBgn0052557.1 1723 1974 +
Chr2	stalkie_big_nohaplotig	CDS	88687888	88688322	.	-	0	Parent=FBgn0052557.1.mrna1;Target=FBgn0052557.1 1288 1722 +
Chr2	stalkie_big_nohaplotig	CDS	88688389	88688511	.	-	0	Parent=FBgn0052557.1.mrna1;Target=FBgn0052557.1 1165 1287 +
Chr2	stalkie_big_nohaplotig	CDS	88688655	88688833	.	-	2	Parent=FBgn0052557.1.mrna1;Target=FBgn0052557.1 986 1164 +
Chr2	stalkie_big_nohaplotig	CDS	88688889	88689191	.	-	2	Parent=FBgn0052557.1.mrna1;Target=FBgn0052557.1 683 985 +
Chr2	stalkie_big_nohaplotig	CDS	88689408	88689965	.	-	2	Parent=FBgn0052557.1.mrna1;Target=FBgn0052557.1 125 682 +
Chr2	stalkie_big_nohaplotig	CDS	88692114	88692237	.	-	0	Parent=FBgn0052557.1.mrna1;Target=FBgn0052557.1 1 124 +
Chr2	gffcl	locus	88703454	88705189	.	+	.	ID=RLOC_00019309;geneIDs=comp157863_c0_seq1.path1;transcripts=comp157863_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88703454	88705189	.	+	.	ID=comp157863_c0_seq1.mrna1;geneID=comp157863_c0_seq1.path1;Name=comp157863_c0_seq1;Dir=indeterminatecoverage=99.0;identity=99.9;matches=1735;mismatches=1;indels=0;unknowns=0;Target=comp157863_c0_seq1 1754 19 .;CDS_Target=comp157863_c0_seq1 623 510 .;locus=RLOC_00019309
Chr2	stalkie_big_nohaplotig	exon	88703454	88705189	99	+	.	Parent=comp157863_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88703945	88704058	.	+	0	Parent=comp157863_c0_seq1.mrna1
Chr2	gffcl	locus	88705554	88749320	.	-	.	ID=RLOC_00019311;geneIDs=FBgn0261238.1.path1;transcripts=FBgn0261238.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88705554	88749320	.	-	.	ID=FBgn0261238.1.mrna1;geneID=FBgn0261238.1.path1;Name=FBgn0261238.1;Dir=sensecoverage=100.0;identity=99.9;matches=3941;mismatches=0;indels=2;unknowns=0;locus=RLOC_00019311
Chr2	stalkie_big_nohaplotig	exon	88705554	88705711	100	-	.	Parent=FBgn0261238.1.mrna1;Target=FBgn0261238.1 3785 3942 +
Chr2	stalkie_big_nohaplotig	exon	88707388	88707577	100	-	.	Parent=FBgn0261238.1.mrna1;Target=FBgn0261238.1 3595 3784 +
Chr2	stalkie_big_nohaplotig	exon	88707647	88708673	100	-	.	Parent=FBgn0261238.1.mrna1;Target=FBgn0261238.1 2568 3594 +
Chr2	stalkie_big_nohaplotig	exon	88711409	88711805	100	-	.	Parent=FBgn0261238.1.mrna1;Target=FBgn0261238.1 2171 2567 +
Chr2	stalkie_big_nohaplotig	exon	88711869	88712367	99	-	.	Parent=FBgn0261238.1.mrna1;Target=FBgn0261238.1 1671 2170 +
Chr2	stalkie_big_nohaplotig	exon	88747385	88747478	98	-	.	Parent=FBgn0261238.1.mrna1;Target=FBgn0261238.1 1578 1670 +
Chr2	stalkie_big_nohaplotig	exon	88747537	88748519	100	-	.	Parent=FBgn0261238.1.mrna1;Target=FBgn0261238.1 595 1577 +
Chr2	stalkie_big_nohaplotig	exon	88748592	88748606	100	-	.	Parent=FBgn0261238.1.mrna1;Target=FBgn0261238.1 580 594 +
Chr2	stalkie_big_nohaplotig	exon	88748684	88748880	100	-	.	Parent=FBgn0261238.1.mrna1;Target=FBgn0261238.1 383 579 +
Chr2	stalkie_big_nohaplotig	exon	88748939	88749320	100	-	.	Parent=FBgn0261238.1.mrna1;Target=FBgn0261238.1 1 382 +
Chr2	stalkie_big_nohaplotig	CDS	88705554	88705711	.	-	2	Parent=FBgn0261238.1.mrna1;Target=FBgn0261238.1 3785 3942 +
Chr2	stalkie_big_nohaplotig	CDS	88707388	88707577	.	-	0	Parent=FBgn0261238.1.mrna1;Target=FBgn0261238.1 3595 3784 +
Chr2	stalkie_big_nohaplotig	CDS	88707647	88708673	.	-	1	Parent=FBgn0261238.1.mrna1;Target=FBgn0261238.1 2568 3594 +
Chr2	stalkie_big_nohaplotig	CDS	88711409	88711805	.	-	2	Parent=FBgn0261238.1.mrna1;Target=FBgn0261238.1 2171 2567 +
Chr2	stalkie_big_nohaplotig	CDS	88711869	88712367	.	-	0	Parent=FBgn0261238.1.mrna1;Target=FBgn0261238.1 1671 2170 +
Chr2	stalkie_big_nohaplotig	CDS	88747385	88747478	.	-	1	Parent=FBgn0261238.1.mrna1;Target=FBgn0261238.1 1578 1670 +
Chr2	stalkie_big_nohaplotig	CDS	88747537	88748519	.	-	0	Parent=FBgn0261238.1.mrna1;Target=FBgn0261238.1 595 1577 +
Chr2	stalkie_big_nohaplotig	CDS	88748592	88748606	.	-	0	Parent=FBgn0261238.1.mrna1;Target=FBgn0261238.1 580 594 +
Chr2	stalkie_big_nohaplotig	CDS	88748684	88748880	.	-	2	Parent=FBgn0261238.1.mrna1;Target=FBgn0261238.1 383 579 +
Chr2	stalkie_big_nohaplotig	CDS	88748939	88749320	.	-	0	Parent=FBgn0261238.1.mrna1;Target=FBgn0261238.1 1 382 +
Chr2	gffcl	locus	88727099	88727630	.	+	.	ID=RLOC_00019312;geneIDs=comp86369_c0_seq1.path1;transcripts=comp86369_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88727099	88727630	.	+	.	ID=comp86369_c0_seq1.mrna1;geneID=comp86369_c0_seq1.path1;Name=comp86369_c0_seq1;Dir=indeterminatecoverage=95.7;identity=100.0;matches=532;mismatches=0;indels=0;unknowns=0;Target=comp86369_c0_seq1 556 25 .;CDS_Target=comp86369_c0_seq1 555 238 .;locus=RLOC_00019312
Chr2	stalkie_big_nohaplotig	exon	88727099	88727630	100	+	.	Parent=comp86369_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88727312	88727629	.	+	0	Parent=comp86369_c0_seq1.mrna1
Chr2	gffcl	locus	88727773	88728533	.	-	.	ID=RLOC_00019313;geneIDs=comp116931_c0_seq1.path1;transcripts=comp116931_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88727773	88728533	.	-	.	ID=comp116931_c0_seq1.mrna1;geneID=comp116931_c0_seq1.path1;Name=comp116931_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=761;mismatches=0;indels=0;unknowns=0;Target=comp116931_c0_seq1 761 1 .;CDS_Target=comp116931_c0_seq1 72 1 .;locus=RLOC_00019313
Chr2	stalkie_big_nohaplotig	exon	88727773	88728533	100	-	.	Parent=comp116931_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88728462	88728533	.	-	0	Parent=comp116931_c0_seq1.mrna1
Chr2	gffcl	locus	88764182	88764635	.	-	.	ID=RLOC_00019314;geneIDs=comp152556_c0_seq1.path1;transcripts=comp152556_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88764182	88764635	.	-	.	ID=comp152556_c0_seq1.mrna1;geneID=comp152556_c0_seq1.path1;Name=comp152556_c0_seq1;Dir=indeterminatecoverage=99.8;identity=89.6;matches=407;mismatches=7;indels=40;unknowns=0;Target=comp152556_c0_seq1 414 1 .;CDS_Target=comp152556_c0_seq1 87 1 .;locus=RLOC_00019314
Chr2	stalkie_big_nohaplotig	exon	88764182	88764635	89	-	.	Parent=comp152556_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88764549	88764635	.	-	0	Parent=comp152556_c0_seq1.mrna1
Chr2	gffcl	locus	88764812	88764984	.	+	.	ID=RLOC_00019315;geneIDs=comp144548_c0_seq1.path1;transcripts=comp144548_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88764812	88764984	.	+	.	ID=comp144548_c0_seq1.mrna1;geneID=comp144548_c0_seq1.path1;Name=comp144548_c0_seq1;Dir=indeterminatecoverage=59.1;identity=99.4;matches=172;mismatches=0;indels=1;unknowns=0;Target=comp144548_c0_seq1 172 1 .;CDS_Target=comp144548_c0_seq1 16 2 .;locus=RLOC_00019315
Chr2	stalkie_big_nohaplotig	exon	88764812	88764984	99	+	.	Parent=comp144548_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88764813	88764827	.	+	0	Parent=comp144548_c0_seq1.mrna1
Chr2	gffcl	locus	88765355	88765593	.	+	.	ID=RLOC_00019316;geneIDs=comp151584_c1_seq1.path2;transcripts=comp151584_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	88765355	88765593	.	+	.	ID=comp151584_c1_seq1.mrna2;geneID=comp151584_c1_seq1.path2;Name=comp151584_c1_seq1;Dir=indeterminatecoverage=41.5;identity=100.0;matches=239;mismatches=0;indels=0;unknowns=0;Target=comp151584_c1_seq1 576 338 .;locus=RLOC_00019316
Chr2	stalkie_big_nohaplotig	exon	88765355	88765593	100	+	.	Parent=comp151584_c1_seq1.mrna2
Chr2	gffcl	locus	88820438	88916863	.	+	.	ID=RLOC_00019317;geneIDs=FBgn0037926.1.path1;transcripts=FBgn0037926.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88820438	88916863	.	+	.	ID=FBgn0037926.1.mrna1;geneID=FBgn0037926.1.path1;Name=FBgn0037926.1;Dir=sensecoverage=100.0;identity=99.9;matches=3337;mismatches=0;indels=2;unknowns=0;Target=FBgn0037926.1 3 119 +;locus=RLOC_00019317
Chr2	stalkie_big_nohaplotig	exon	88820438	88820919	99	+	.	Parent=FBgn0037926.1.mrna1;Target=FBgn0037926.1 1 483 +
Chr2	stalkie_big_nohaplotig	exon	88820978	88821492	100	+	.	Parent=FBgn0037926.1.mrna1;Target=FBgn0037926.1 484 998 +
Chr2	stalkie_big_nohaplotig	exon	88821892	88822978	100	+	.	Parent=FBgn0037926.1.mrna1;Target=FBgn0037926.1 999 2085 +
Chr2	stalkie_big_nohaplotig	exon	88823039	88823777	100	+	.	Parent=FBgn0037926.1.mrna1;Target=FBgn0037926.1 2086 2824 +
Chr2	stalkie_big_nohaplotig	exon	88914128	88914164	100	+	.	Parent=FBgn0037926.1.mrna1;Target=FBgn0037926.1 2825 2861 +
Chr2	stalkie_big_nohaplotig	exon	88916251	88916429	100	+	.	Parent=FBgn0037926.1.mrna1;Target=FBgn0037926.1 2862 3040 +
Chr2	stalkie_big_nohaplotig	exon	88916493	88916724	100	+	.	Parent=FBgn0037926.1.mrna1;Target=FBgn0037926.1 3041 3272 +
Chr2	stalkie_big_nohaplotig	exon	88916798	88916863	98	+	.	Parent=FBgn0037926.1.mrna1;Target=FBgn0037926.1 3273 3339 +
Chr2	stalkie_big_nohaplotig	CDS	88820440	88820555	.	+	0	Parent=FBgn0037926.1.mrna1
Chr2	gffcl	locus	88837830	88841092	.	+	.	ID=RLOC_00019318;geneIDs=FBgn0038734.1.path2;transcripts=FBgn0038734.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	88837830	88841092	.	+	.	ID=FBgn0038734.1.mrna2;geneID=FBgn0038734.1.path2;Name=FBgn0038734.1;Dir=sensecoverage=100.0;identity=99.9;matches=1340;mismatches=0;indels=1;unknowns=0;locus=RLOC_00019318
Chr2	stalkie_big_nohaplotig	exon	88837830	88837994	100	+	.	Parent=FBgn0038734.1.mrna2;Target=FBgn0038734.1 1 165 +
Chr2	stalkie_big_nohaplotig	exon	88838050	88838257	100	+	.	Parent=FBgn0038734.1.mrna2;Target=FBgn0038734.1 166 373 +
Chr2	stalkie_big_nohaplotig	exon	88840007	88840199	100	+	.	Parent=FBgn0038734.1.mrna2;Target=FBgn0038734.1 374 566 +
Chr2	stalkie_big_nohaplotig	exon	88840255	88840371	100	+	.	Parent=FBgn0038734.1.mrna2;Target=FBgn0038734.1 567 683 +
Chr2	stalkie_big_nohaplotig	exon	88840436	88841092	99	+	.	Parent=FBgn0038734.1.mrna2;Target=FBgn0038734.1 684 1341 +
Chr2	stalkie_big_nohaplotig	CDS	88837830	88837994	.	+	0	Parent=FBgn0038734.1.mrna2;Target=FBgn0038734.1 1 165 +
Chr2	stalkie_big_nohaplotig	CDS	88838050	88838257	.	+	0	Parent=FBgn0038734.1.mrna2;Target=FBgn0038734.1 166 373 +
Chr2	stalkie_big_nohaplotig	CDS	88840007	88840199	.	+	2	Parent=FBgn0038734.1.mrna2;Target=FBgn0038734.1 374 566 +
Chr2	stalkie_big_nohaplotig	CDS	88840255	88840371	.	+	1	Parent=FBgn0038734.1.mrna2;Target=FBgn0038734.1 567 683 +
Chr2	stalkie_big_nohaplotig	CDS	88840436	88841092	.	+	1	Parent=FBgn0038734.1.mrna2;Target=FBgn0038734.1 684 1341 +
Chr2	gffcl	locus	88863782	88865253	.	+	.	ID=RLOC_00019319;geneIDs=comp161959_c1_seq1.path5;transcripts=comp161959_c1_seq1.mrna5
Chr2	stalkie_big_nohaplotig	mRNA	88863782	88865253	.	+	.	ID=comp161959_c1_seq1.mrna5;geneID=comp161959_c1_seq1.path5;Name=comp161959_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1464;mismatches=8;indels=0;unknowns=0;Target=comp161959_c1_seq1 1472 1 .;CDS_Target=comp161959_c1_seq1 1265 453 .;locus=RLOC_00019319
Chr2	stalkie_big_nohaplotig	exon	88863782	88865253	99	+	.	Parent=comp161959_c1_seq1.mrna5
Chr2	stalkie_big_nohaplotig	CDS	88864234	88865046	.	+	0	Parent=comp161959_c1_seq1.mrna5
Chr2	gffcl	locus	88865687	88866947	.	-	.	ID=RLOC_00019320;geneIDs=ORF971.path4,comp160705_c3_seq1.path4;transcripts=ORF971.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	88865687	88866947	.	-	.	ID=ORF971.mrna4;geneID=ORF971.path4;Name=ORF971;Dir=indeterminatecoverage=96.6;identity=98.1;matches=1240;mismatches=20;indels=4;unknowns=0;Target=ORF971 1308 46 .;CDS_Target=ORF971 358 263 .;locus=RLOC_00019320
Chr2	stalkie_big_nohaplotig	exon	88865687	88866947	98	-	.	Parent=ORF971.mrna4
Chr2	stalkie_big_nohaplotig	CDS	88866638	88866733	.	-	0	Parent=ORF971.mrna4
Chr2	gffcl	locus	88980481	88980648	.	+	.	ID=RLOC_00019321;geneIDs=comp8821_c0_seq1.path1;transcripts=comp8821_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88980481	88980648	.	+	.	ID=comp8821_c0_seq1.mrna1;geneID=comp8821_c0_seq1.path1;Name=comp8821_c0_seq1;Dir=indeterminatecoverage=75.0;identity=99.4;matches=167;mismatches=1;indels=0;unknowns=0;Target=comp8821_c0_seq1 224 57 .;CDS_Target=comp8821_c0_seq1 186 58 .;locus=RLOC_00019321
Chr2	stalkie_big_nohaplotig	exon	88980481	88980648	99	+	.	Parent=comp8821_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88980482	88980610	.	+	0	Parent=comp8821_c0_seq1.mrna1
Chr2	gffcl	locus	88983143	88983649	.	+	.	ID=RLOC_00019322;geneIDs=FBgn0037930.1.path1;transcripts=FBgn0037930.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88983143	88983649	.	+	.	ID=FBgn0037930.1.mrna1;geneID=FBgn0037930.1.path1;Name=FBgn0037930.1;Dir=sensecoverage=100.0;identity=100.0;matches=450;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019322
Chr2	stalkie_big_nohaplotig	exon	88983143	88983340	100	+	.	Parent=FBgn0037930.1.mrna1;Target=FBgn0037930.1 1 198 +
Chr2	stalkie_big_nohaplotig	exon	88983398	88983649	100	+	.	Parent=FBgn0037930.1.mrna1;Target=FBgn0037930.1 199 450 +
Chr2	stalkie_big_nohaplotig	CDS	88983143	88983340	.	+	0	Parent=FBgn0037930.1.mrna1;Target=FBgn0037930.1 1 198 +
Chr2	stalkie_big_nohaplotig	CDS	88983398	88983649	.	+	0	Parent=FBgn0037930.1.mrna1;Target=FBgn0037930.1 199 450 +
Chr2	gffcl	locus	88989454	88990085	.	-	.	ID=RLOC_00019323;geneIDs=comp161998_c0_seq1.path1;transcripts=comp161998_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	88989454	88990085	.	-	.	ID=comp161998_c0_seq1.mrna1;geneID=comp161998_c0_seq1.path1;Name=comp161998_c0_seq1;Dir=indeterminatecoverage=72.1;identity=99.4;matches=628;mismatches=4;indels=0;unknowns=0;Target=comp161998_c0_seq1 632 1 .;CDS_Target=comp161998_c0_seq1 632 3 .;locus=RLOC_00019323
Chr2	stalkie_big_nohaplotig	exon	88989454	88990085	99	-	.	Parent=comp161998_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	88989454	88990083	.	-	0	Parent=comp161998_c0_seq1.mrna1
Chr2	gffcl	locus	88992476	88992716	.	-	.	ID=RLOC_00019324;geneIDs=comp162752_c0_seq1.path2;transcripts=comp162752_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	88992476	88992716	.	-	.	ID=comp162752_c0_seq1.mrna2;geneID=comp162752_c0_seq1.path2;Name=comp162752_c0_seq1;Dir=indeterminatecoverage=13.3;identity=99.6;matches=240;mismatches=1;indels=0;unknowns=0;Target=comp162752_c0_seq1 1623 1383 .;locus=RLOC_00019324
Chr2	stalkie_big_nohaplotig	exon	88992476	88992716	99	-	.	Parent=comp162752_c0_seq1.mrna2
Chr2	gffcl	locus	89002050	89003311	.	-	.	ID=RLOC_00019326;geneIDs=FBgn0037933.1.path1;transcripts=FBgn0037933.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89002050	89003311	.	-	.	ID=FBgn0037933.1.mrna1;geneID=FBgn0037933.1.path1;Name=FBgn0037933.1;Dir=sensecoverage=100.0;identity=100.0;matches=828;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019326
Chr2	stalkie_big_nohaplotig	exon	89002050	89002747	100	-	.	Parent=FBgn0037933.1.mrna1;Target=FBgn0037933.1 131 828 +
Chr2	stalkie_big_nohaplotig	exon	89003182	89003311	100	-	.	Parent=FBgn0037933.1.mrna1;Target=FBgn0037933.1 1 130 +
Chr2	stalkie_big_nohaplotig	CDS	89002050	89002747	.	-	2	Parent=FBgn0037933.1.mrna1;Target=FBgn0037933.1 131 828 +
Chr2	stalkie_big_nohaplotig	CDS	89003182	89003311	.	-	0	Parent=FBgn0037933.1.mrna1;Target=FBgn0037933.1 1 130 +
Chr2	gffcl	locus	89005785	89007071	.	+	.	ID=RLOC_00019327;geneIDs=ORF1244.path1;transcripts=ORF1244.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89005785	89007071	.	+	.	ID=ORF1244.mrna1;geneID=ORF1244.path1;Name=ORF1244;Dir=sensecoverage=100.0;identity=99.9;matches=1166;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019327
Chr2	stalkie_big_nohaplotig	exon	89005785	89005952	100	+	.	Parent=ORF1244.mrna1;Target=ORF1244 1 168 +
Chr2	stalkie_big_nohaplotig	exon	89006008	89006371	99	+	.	Parent=ORF1244.mrna1;Target=ORF1244 169 532 +
Chr2	stalkie_big_nohaplotig	exon	89006437	89007071	100	+	.	Parent=ORF1244.mrna1;Target=ORF1244 533 1167 +
Chr2	stalkie_big_nohaplotig	CDS	89005785	89005952	.	+	0	Parent=ORF1244.mrna1;Target=ORF1244 1 168 +
Chr2	stalkie_big_nohaplotig	CDS	89006008	89006371	.	+	0	Parent=ORF1244.mrna1;Target=ORF1244 169 532 +
Chr2	stalkie_big_nohaplotig	CDS	89006437	89007071	.	+	2	Parent=ORF1244.mrna1;Target=ORF1244 533 1167 +
Chr2	gffcl	locus	89016130	89016758	.	-	.	ID=RLOC_00019329;geneIDs=FBgn0011290.1.path1;transcripts=FBgn0011290.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89016130	89016758	.	-	.	ID=FBgn0011290.1.mrna1;geneID=FBgn0011290.1.path1;Name=FBgn0011290.1;Dir=sensecoverage=100.0;identity=100.0;matches=558;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019329
Chr2	stalkie_big_nohaplotig	exon	89016130	89016447	100	-	.	Parent=FBgn0011290.1.mrna1;Target=FBgn0011290.1 241 558 +
Chr2	stalkie_big_nohaplotig	exon	89016519	89016758	100	-	.	Parent=FBgn0011290.1.mrna1;Target=FBgn0011290.1 1 240 +
Chr2	stalkie_big_nohaplotig	CDS	89016130	89016447	.	-	0	Parent=FBgn0011290.1.mrna1;Target=FBgn0011290.1 241 558 +
Chr2	stalkie_big_nohaplotig	CDS	89016519	89016758	.	-	0	Parent=FBgn0011290.1.mrna1;Target=FBgn0011290.1 1 240 +
Chr2	gffcl	locus	89019755	89024398	.	+	.	ID=RLOC_00019330;geneIDs=ORF223.path1;transcripts=ORF223.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89019755	89024398	.	+	.	ID=ORF223.mrna1;geneID=ORF223.path1;Name=ORF223;Dir=sensecoverage=100.0;identity=99.9;matches=2343;mismatches=3;indels=0;unknowns=0;locus=RLOC_00019330
Chr2	stalkie_big_nohaplotig	exon	89019755	89019958	100	+	.	Parent=ORF223.mrna1;Target=ORF223 1 204 +
Chr2	stalkie_big_nohaplotig	exon	89020024	89020357	100	+	.	Parent=ORF223.mrna1;Target=ORF223 205 538 +
Chr2	stalkie_big_nohaplotig	exon	89020427	89020493	100	+	.	Parent=ORF223.mrna1;Target=ORF223 539 605 +
Chr2	stalkie_big_nohaplotig	exon	89020551	89020790	100	+	.	Parent=ORF223.mrna1;Target=ORF223 606 845 +
Chr2	stalkie_big_nohaplotig	exon	89020853	89020983	100	+	.	Parent=ORF223.mrna1;Target=ORF223 846 976 +
Chr2	stalkie_big_nohaplotig	exon	89021160	89021393	100	+	.	Parent=ORF223.mrna1;Target=ORF223 977 1210 +
Chr2	stalkie_big_nohaplotig	exon	89022836	89023042	99	+	.	Parent=ORF223.mrna1;Target=ORF223 1211 1417 +
Chr2	stalkie_big_nohaplotig	exon	89023102	89023195	98	+	.	Parent=ORF223.mrna1;Target=ORF223 1418 1511 +
Chr2	stalkie_big_nohaplotig	exon	89023269	89023529	100	+	.	Parent=ORF223.mrna1;Target=ORF223 1512 1772 +
Chr2	stalkie_big_nohaplotig	exon	89023593	89023723	100	+	.	Parent=ORF223.mrna1;Target=ORF223 1773 1903 +
Chr2	stalkie_big_nohaplotig	exon	89023833	89023923	100	+	.	Parent=ORF223.mrna1;Target=ORF223 1904 1994 +
Chr2	stalkie_big_nohaplotig	exon	89023989	89024246	100	+	.	Parent=ORF223.mrna1;Target=ORF223 1995 2252 +
Chr2	stalkie_big_nohaplotig	exon	89024305	89024398	100	+	.	Parent=ORF223.mrna1;Target=ORF223 2253 2346 +
Chr2	stalkie_big_nohaplotig	CDS	89019755	89019958	.	+	0	Parent=ORF223.mrna1;Target=ORF223 1 204 +
Chr2	stalkie_big_nohaplotig	CDS	89020024	89020357	.	+	0	Parent=ORF223.mrna1;Target=ORF223 205 538 +
Chr2	stalkie_big_nohaplotig	CDS	89020427	89020493	.	+	2	Parent=ORF223.mrna1;Target=ORF223 539 605 +
Chr2	stalkie_big_nohaplotig	CDS	89020551	89020790	.	+	1	Parent=ORF223.mrna1;Target=ORF223 606 845 +
Chr2	stalkie_big_nohaplotig	CDS	89020853	89020983	.	+	1	Parent=ORF223.mrna1;Target=ORF223 846 976 +
Chr2	stalkie_big_nohaplotig	CDS	89021160	89021393	.	+	2	Parent=ORF223.mrna1;Target=ORF223 977 1210 +
Chr2	stalkie_big_nohaplotig	CDS	89022836	89023042	.	+	2	Parent=ORF223.mrna1;Target=ORF223 1211 1417 +
Chr2	stalkie_big_nohaplotig	CDS	89023102	89023195	.	+	2	Parent=ORF223.mrna1;Target=ORF223 1418 1511 +
Chr2	stalkie_big_nohaplotig	CDS	89023269	89023529	.	+	1	Parent=ORF223.mrna1;Target=ORF223 1512 1772 +
Chr2	stalkie_big_nohaplotig	CDS	89023593	89023723	.	+	1	Parent=ORF223.mrna1;Target=ORF223 1773 1903 +
Chr2	stalkie_big_nohaplotig	CDS	89023833	89023923	.	+	2	Parent=ORF223.mrna1;Target=ORF223 1904 1994 +
Chr2	stalkie_big_nohaplotig	CDS	89023989	89024246	.	+	1	Parent=ORF223.mrna1;Target=ORF223 1995 2252 +
Chr2	stalkie_big_nohaplotig	CDS	89024305	89024398	.	+	1	Parent=ORF223.mrna1;Target=ORF223 2253 2346 +
Chr2	gffcl	locus	89025721	89029140	.	+	.	ID=RLOC_00019331;geneIDs=FBgn0028647.2.path1;transcripts=FBgn0028647.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89025721	89029140	.	+	.	ID=FBgn0028647.2.mrna1;geneID=FBgn0028647.2.path1;Name=FBgn0028647.2;Dir=sensecoverage=100.0;identity=100.0;matches=3111;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019331
Chr2	stalkie_big_nohaplotig	exon	89025721	89025985	100	+	.	Parent=FBgn0028647.2.mrna1;Target=FBgn0028647.2 1 265 +
Chr2	stalkie_big_nohaplotig	exon	89026047	89026140	100	+	.	Parent=FBgn0028647.2.mrna1;Target=FBgn0028647.2 266 359 +
Chr2	stalkie_big_nohaplotig	exon	89026205	89026330	100	+	.	Parent=FBgn0028647.2.mrna1;Target=FBgn0028647.2 360 485 +
Chr2	stalkie_big_nohaplotig	exon	89026386	89028244	100	+	.	Parent=FBgn0028647.2.mrna1;Target=FBgn0028647.2 486 2344 +
Chr2	stalkie_big_nohaplotig	exon	89028314	89028930	100	+	.	Parent=FBgn0028647.2.mrna1;Target=FBgn0028647.2 2345 2961 +
Chr2	stalkie_big_nohaplotig	exon	89028991	89029140	100	+	.	Parent=FBgn0028647.2.mrna1;Target=FBgn0028647.2 2962 3111 +
Chr2	stalkie_big_nohaplotig	CDS	89025721	89025985	.	+	0	Parent=FBgn0028647.2.mrna1;Target=FBgn0028647.2 1 265 +
Chr2	stalkie_big_nohaplotig	CDS	89026047	89026140	.	+	2	Parent=FBgn0028647.2.mrna1;Target=FBgn0028647.2 266 359 +
Chr2	stalkie_big_nohaplotig	CDS	89026205	89026330	.	+	1	Parent=FBgn0028647.2.mrna1;Target=FBgn0028647.2 360 485 +
Chr2	stalkie_big_nohaplotig	CDS	89026386	89028244	.	+	1	Parent=FBgn0028647.2.mrna1;Target=FBgn0028647.2 486 2344 +
Chr2	stalkie_big_nohaplotig	CDS	89028314	89028930	.	+	2	Parent=FBgn0028647.2.mrna1;Target=FBgn0028647.2 2345 2961 +
Chr2	stalkie_big_nohaplotig	CDS	89028991	89029140	.	+	0	Parent=FBgn0028647.2.mrna1;Target=FBgn0028647.2 2962 3111 +
Chr2	gffcl	locus	89036579	89039178	.	-	.	ID=RLOC_00019332;geneIDs=FBgn0261575.1.path1;transcripts=FBgn0261575.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89036579	89039178	.	-	.	ID=FBgn0261575.1.mrna1;geneID=FBgn0261575.1.path1;Name=FBgn0261575.1;Dir=sensecoverage=100.0;identity=100.0;matches=2010;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019332
Chr2	stalkie_big_nohaplotig	exon	89036579	89036766	100	-	.	Parent=FBgn0261575.1.mrna1;Target=FBgn0261575.1 1823 2010 +
Chr2	stalkie_big_nohaplotig	exon	89036853	89037571	100	-	.	Parent=FBgn0261575.1.mrna1;Target=FBgn0261575.1 1104 1822 +
Chr2	stalkie_big_nohaplotig	exon	89037933	89038815	100	-	.	Parent=FBgn0261575.1.mrna1;Target=FBgn0261575.1 221 1103 +
Chr2	stalkie_big_nohaplotig	exon	89038959	89039178	100	-	.	Parent=FBgn0261575.1.mrna1;Target=FBgn0261575.1 1 220 +
Chr2	stalkie_big_nohaplotig	CDS	89036579	89036766	.	-	2	Parent=FBgn0261575.1.mrna1;Target=FBgn0261575.1 1823 2010 +
Chr2	stalkie_big_nohaplotig	CDS	89036853	89037571	.	-	1	Parent=FBgn0261575.1.mrna1;Target=FBgn0261575.1 1104 1822 +
Chr2	stalkie_big_nohaplotig	CDS	89037933	89038815	.	-	2	Parent=FBgn0261575.1.mrna1;Target=FBgn0261575.1 221 1103 +
Chr2	stalkie_big_nohaplotig	CDS	89038959	89039178	.	-	0	Parent=FBgn0261575.1.mrna1;Target=FBgn0261575.1 1 220 +
Chr2	gffcl	locus	89050963	89532976	.	-	.	ID=RLOC_00019333;geneIDs=FBgn0004509.1.path1,comp149715_c0_seq1.path1,comp161726_c2_seq1.path1;transcripts=comp161726_c2_seq1.mrna1,FBgn0004509.1.mrna1,comp149715_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89050963	89532976	.	-	.	ID=comp161726_c2_seq1.mrna1;geneID=comp161726_c2_seq1.path1;Name=comp161726_c2_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=4277;mismatches=0;indels=2;unknowns=0;locus=RLOC_00019333
Chr2	stalkie_big_nohaplotig	exon	89050963	89051902	99	-	.	Parent=comp161726_c2_seq1.mrna1;Target=comp161726_c2_seq1 3339 4279 +
Chr2	stalkie_big_nohaplotig	exon	89064304	89064370	100	-	.	Parent=comp161726_c2_seq1.mrna1;Target=comp161726_c2_seq1 3272 3338 +
Chr2	stalkie_big_nohaplotig	exon	89075147	89075319	100	-	.	Parent=comp161726_c2_seq1.mrna1;Target=comp161726_c2_seq1 3099 3271 +
Chr2	stalkie_big_nohaplotig	exon	89078366	89078484	100	-	.	Parent=comp161726_c2_seq1.mrna1;Target=comp161726_c2_seq1 2980 3098 +
Chr2	stalkie_big_nohaplotig	exon	89078813	89078983	100	-	.	Parent=comp161726_c2_seq1.mrna1;Target=comp161726_c2_seq1 2809 2979 +
Chr2	stalkie_big_nohaplotig	exon	89079084	89079958	100	-	.	Parent=comp161726_c2_seq1.mrna1;Target=comp161726_c2_seq1 1934 2808 +
Chr2	stalkie_big_nohaplotig	exon	89080018	89080449	100	-	.	Parent=comp161726_c2_seq1.mrna1;Target=comp161726_c2_seq1 1502 1933 +
Chr2	stalkie_big_nohaplotig	exon	89252549	89253413	100	-	.	Parent=comp161726_c2_seq1.mrna1;Target=comp161726_c2_seq1 637 1501 +
Chr2	stalkie_big_nohaplotig	exon	89333175	89333223	100	-	.	Parent=comp161726_c2_seq1.mrna1;Target=comp161726_c2_seq1 588 636 +
Chr2	stalkie_big_nohaplotig	exon	89361848	89361852	100	-	.	Parent=comp161726_c2_seq1.mrna1;Target=comp161726_c2_seq1 583 587 +
Chr2	stalkie_big_nohaplotig	exon	89386330	89386383	100	-	.	Parent=comp161726_c2_seq1.mrna1;Target=comp161726_c2_seq1 529 582 +
Chr2	stalkie_big_nohaplotig	exon	89409227	89409275	100	-	.	Parent=comp161726_c2_seq1.mrna1;Target=comp161726_c2_seq1 480 528 +
Chr2	stalkie_big_nohaplotig	exon	89532499	89532976	99	-	.	Parent=comp161726_c2_seq1.mrna1;Target=comp161726_c2_seq1 1 479 +
Chr2	stalkie_big_nohaplotig	CDS	89051812	89051902	.	-	2	Parent=comp161726_c2_seq1.mrna1;Target=comp161726_c2_seq1 3339 3430 +
Chr2	stalkie_big_nohaplotig	CDS	89064304	89064370	.	-	0	Parent=comp161726_c2_seq1.mrna1;Target=comp161726_c2_seq1 3272 3338 +
Chr2	stalkie_big_nohaplotig	CDS	89075147	89075319	.	-	2	Parent=comp161726_c2_seq1.mrna1;Target=comp161726_c2_seq1 3099 3271 +
Chr2	stalkie_big_nohaplotig	CDS	89078366	89078484	.	-	1	Parent=comp161726_c2_seq1.mrna1;Target=comp161726_c2_seq1 2980 3098 +
Chr2	stalkie_big_nohaplotig	CDS	89078813	89078983	.	-	1	Parent=comp161726_c2_seq1.mrna1;Target=comp161726_c2_seq1 2809 2979 +
Chr2	stalkie_big_nohaplotig	CDS	89079084	89079958	.	-	0	Parent=comp161726_c2_seq1.mrna1;Target=comp161726_c2_seq1 1934 2808 +
Chr2	stalkie_big_nohaplotig	CDS	89080018	89080449	.	-	0	Parent=comp161726_c2_seq1.mrna1;Target=comp161726_c2_seq1 1502 1933 +
Chr2	stalkie_big_nohaplotig	CDS	89252549	89253253	.	-	0	Parent=comp161726_c2_seq1.mrna1;Target=comp161726_c2_seq1 797 1501 +
Chr2	stalkie_big_nohaplotig	mRNA	89075147	89253334	.	-	.	ID=FBgn0004509.1.mrna1;geneID=FBgn0004509.1.path1;Name=FBgn0004509.1;Dir=sensecoverage=94.1;identity=100.0;matches=2499;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019333
Chr2	stalkie_big_nohaplotig	exon	89075147	89075319	100	-	.	Parent=FBgn0004509.1.mrna1;Target=FBgn0004509.1 2327 2499 +
Chr2	stalkie_big_nohaplotig	exon	89078366	89078484	100	-	.	Parent=FBgn0004509.1.mrna1;Target=FBgn0004509.1 2208 2326 +
Chr2	stalkie_big_nohaplotig	exon	89078813	89078983	100	-	.	Parent=FBgn0004509.1.mrna1;Target=FBgn0004509.1 2037 2207 +
Chr2	stalkie_big_nohaplotig	exon	89079084	89079958	100	-	.	Parent=FBgn0004509.1.mrna1;Target=FBgn0004509.1 1162 2036 +
Chr2	stalkie_big_nohaplotig	exon	89080018	89080146	100	-	.	Parent=FBgn0004509.1.mrna1;Target=FBgn0004509.1 1033 1161 +
Chr2	stalkie_big_nohaplotig	exon	89080204	89080449	100	-	.	Parent=FBgn0004509.1.mrna1;Target=FBgn0004509.1 787 1032 +
Chr2	stalkie_big_nohaplotig	exon	89252549	89253334	100	-	.	Parent=FBgn0004509.1.mrna1;Target=FBgn0004509.1 1 786 +
Chr2	stalkie_big_nohaplotig	CDS	89075147	89075319	.	-	2	Parent=FBgn0004509.1.mrna1;Target=FBgn0004509.1 2327 2499 +
Chr2	stalkie_big_nohaplotig	CDS	89078366	89078484	.	-	1	Parent=FBgn0004509.1.mrna1;Target=FBgn0004509.1 2208 2326 +
Chr2	stalkie_big_nohaplotig	CDS	89078813	89078983	.	-	1	Parent=FBgn0004509.1.mrna1;Target=FBgn0004509.1 2037 2207 +
Chr2	stalkie_big_nohaplotig	CDS	89079084	89079958	.	-	0	Parent=FBgn0004509.1.mrna1;Target=FBgn0004509.1 1162 2036 +
Chr2	stalkie_big_nohaplotig	CDS	89080018	89080146	.	-	0	Parent=FBgn0004509.1.mrna1;Target=FBgn0004509.1 1033 1161 +
Chr2	stalkie_big_nohaplotig	CDS	89080204	89080449	.	-	0	Parent=FBgn0004509.1.mrna1;Target=FBgn0004509.1 787 1032 +
Chr2	stalkie_big_nohaplotig	CDS	89252549	89253334	.	-	0	Parent=FBgn0004509.1.mrna1;Target=FBgn0004509.1 1 786 +
Chr2	stalkie_big_nohaplotig	mRNA	89361696	89362160	.	-	.	ID=comp149715_c0_seq1.mrna1;geneID=comp149715_c0_seq1.path1;Name=comp149715_c0_seq1;Dir=sensecoverage=99.2;identity=100.0;matches=395;mismatches=0;indels=0;unknowns=0;Target=comp149715_c0_seq1 3 155 +;locus=RLOC_00019333
Chr2	stalkie_big_nohaplotig	exon	89361696	89361852	100	-	.	Parent=comp149715_c0_seq1.mrna1;Target=comp149715_c0_seq1 241 397 +
Chr2	stalkie_big_nohaplotig	exon	89361923	89362160	100	-	.	Parent=comp149715_c0_seq1.mrna1;Target=comp149715_c0_seq1 3 240 +
Chr2	stalkie_big_nohaplotig	CDS	89362008	89362160	.	-	0	Parent=comp149715_c0_seq1.mrna1
Chr2	gffcl	locus	89054271	89054688	.	-	.	ID=RLOC_00019334;geneIDs=comp145241_c0_seq1.path1;transcripts=comp145241_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89054271	89054688	.	-	.	ID=comp145241_c0_seq1.mrna1;geneID=comp145241_c0_seq1.path1;Name=comp145241_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=411;mismatches=6;indels=3;unknowns=0;Target=comp145241_c0_seq1 419 1 .;CDS_Target=comp145241_c0_seq1 286 209 .;locus=RLOC_00019334
Chr2	stalkie_big_nohaplotig	exon	89054271	89054688	97	-	.	Parent=comp145241_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89054404	89054480	.	-	0	Parent=comp145241_c0_seq1.mrna1
Chr2	gffcl	locus	89055703	89056487	.	-	.	ID=RLOC_00019335;geneIDs=comp135313_c0_seq1.path1;transcripts=comp135313_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89055703	89056487	.	-	.	ID=comp135313_c0_seq1.mrna1;geneID=comp135313_c0_seq1.path1;Name=comp135313_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.7;matches=785;mismatches=0;indels=2;unknowns=0;Target=comp135313_c0_seq1 794 8 .;CDS_Target=comp135313_c0_seq1 761 717 .;locus=RLOC_00019335
Chr2	stalkie_big_nohaplotig	exon	89055703	89056487	99	-	.	Parent=comp135313_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89055736	89055780	.	-	0	Parent=comp135313_c0_seq1.mrna1
Chr2	gffcl	locus	89059610	89060319	.	+	.	ID=RLOC_00019336;geneIDs=comp145170_c0_seq1.path1;transcripts=comp145170_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89059610	89060319	.	+	.	ID=comp145170_c0_seq1.mrna1;geneID=comp145170_c0_seq1.path1;Name=comp145170_c0_seq1;Dir=indeterminatecoverage=98.2;identity=100.0;matches=710;mismatches=0;indels=0;unknowns=0;Target=comp145170_c0_seq1 723 14 .;CDS_Target=comp145170_c0_seq1 108 16 .;locus=RLOC_00019336
Chr2	stalkie_big_nohaplotig	exon	89059610	89060319	100	+	.	Parent=comp145170_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89059612	89059704	.	+	0	Parent=comp145170_c0_seq1.mrna1
Chr2	gffcl	locus	89061870	89062217	.	-	.	ID=RLOC_00019337;geneIDs=comp134739_c1_seq1.path1;transcripts=comp134739_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89061870	89062217	.	-	.	ID=comp134739_c1_seq1.mrna1;geneID=comp134739_c1_seq1.path1;Name=comp134739_c1_seq1;Dir=indeterminatecoverage=99.7;identity=88.7;matches=330;mismatches=10;indels=32;unknowns=0;Target=comp134739_c1_seq1 364 1 .;CDS_Target=comp134739_c1_seq1 289 101 .;locus=RLOC_00019337
Chr2	stalkie_big_nohaplotig	exon	89061870	89062217	88	-	.	Parent=comp134739_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89061945	89062117	.	-	0	Parent=comp134739_c1_seq1.mrna1
Chr2	gffcl	locus	89062708	89063108	.	+	.	ID=RLOC_00019338;geneIDs=comp149842_c0_seq1.path1;transcripts=comp149842_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89062708	89063108	.	+	.	ID=comp149842_c0_seq1.mrna1;geneID=comp149842_c0_seq1.path1;Name=comp149842_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.6;matches=384;mismatches=17;indels=23;unknowns=0;Target=comp149842_c0_seq1 424 1 .;CDS_Target=comp149842_c0_seq1 423 322 .;locus=RLOC_00019338
Chr2	stalkie_big_nohaplotig	exon	89062708	89063108	90	+	.	Parent=comp149842_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89063006	89063107	.	+	0	Parent=comp149842_c0_seq1.mrna1
Chr2	gffcl	locus	89063366	89063802	.	+	.	ID=RLOC_00019339;geneIDs=comp522496_c0_seq1.path1;transcripts=comp522496_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89063366	89063802	.	+	.	ID=comp522496_c0_seq1.mrna1;geneID=comp522496_c0_seq1.path1;Name=comp522496_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=434;mismatches=3;indels=0;unknowns=0;Target=comp522496_c0_seq1 437 1 .;CDS_Target=comp522496_c0_seq1 201 1 .;locus=RLOC_00019339
Chr2	stalkie_big_nohaplotig	exon	89063366	89063802	99	+	.	Parent=comp522496_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89063366	89063566	.	+	0	Parent=comp522496_c0_seq1.mrna1
Chr2	gffcl	locus	89198827	91196640	.	+	.	ID=RLOC_00019341;geneIDs=comp151402_c1_seq1.path1;transcripts=comp151402_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89198827	91196640	.	+	.	ID=comp151402_c1_seq1.mrna1;geneID=comp151402_c1_seq1.path1;Name=comp151402_c1_seq1;Dir=indeterminatecoverage=94.5;identity=99.1;matches=453;mismatches=4;indels=0;unknowns=0;Target=comp151402_c1_seq1 111 43 .;locus=RLOC_00019341
Chr2	stalkie_big_nohaplotig	exon	89198827	89199204	98	+	.	Parent=comp151402_c1_seq1.mrna1;Target=comp151402_c1_seq1 379 2 .
Chr2	stalkie_big_nohaplotig	exon	91103799	91103806	100	+	.	Parent=comp151402_c1_seq1.mrna1;Target=comp151402_c1_seq1 387 380 .
Chr2	stalkie_big_nohaplotig	exon	91106857	91106860	100	+	.	Parent=comp151402_c1_seq1.mrna1;Target=comp151402_c1_seq1 391 388 .
Chr2	stalkie_big_nohaplotig	exon	91110662	91110668	100	+	.	Parent=comp151402_c1_seq1.mrna1;Target=comp151402_c1_seq1 398 392 .
Chr2	stalkie_big_nohaplotig	exon	91110969	91110971	100	+	.	Parent=comp151402_c1_seq1.mrna1;Target=comp151402_c1_seq1 401 399 .
Chr2	stalkie_big_nohaplotig	exon	91117915	91117919	100	+	.	Parent=comp151402_c1_seq1.mrna1;Target=comp151402_c1_seq1 406 402 .
Chr2	stalkie_big_nohaplotig	exon	91121886	91121894	100	+	.	Parent=comp151402_c1_seq1.mrna1;Target=comp151402_c1_seq1 415 407 .
Chr2	stalkie_big_nohaplotig	exon	91121905	91121906	100	+	.	Parent=comp151402_c1_seq1.mrna1;Target=comp151402_c1_seq1 426 425 .
Chr2	stalkie_big_nohaplotig	exon	91124236	91124243	100	+	.	Parent=comp151402_c1_seq1.mrna1;Target=comp151402_c1_seq1 434 427 .
Chr2	stalkie_big_nohaplotig	exon	91144652	91144655	100	+	.	Parent=comp151402_c1_seq1.mrna1;Target=comp151402_c1_seq1 438 435 .
Chr2	stalkie_big_nohaplotig	exon	91150826	91150831	100	+	.	Parent=comp151402_c1_seq1.mrna1;Target=comp151402_c1_seq1 444 439 .
Chr2	stalkie_big_nohaplotig	exon	91154033	91154034	100	+	.	Parent=comp151402_c1_seq1.mrna1;Target=comp151402_c1_seq1 446 445 .
Chr2	stalkie_big_nohaplotig	exon	91192117	91192119	100	+	.	Parent=comp151402_c1_seq1.mrna1;Target=comp151402_c1_seq1 449 447 .
Chr2	stalkie_big_nohaplotig	exon	91196623	91196640	100	+	.	Parent=comp151402_c1_seq1.mrna1;Target=comp151402_c1_seq1 467 450 .
Chr2	stalkie_big_nohaplotig	CDS	89198868	89198936	.	+	0	Parent=comp151402_c1_seq1.mrna1
Chr2	gffcl	locus	89199305	89199596	.	+	.	ID=RLOC_00019342;geneIDs=comp113801_c0_seq1.path1;transcripts=comp113801_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89199305	89199596	.	+	.	ID=comp113801_c0_seq1.mrna1;geneID=comp113801_c0_seq1.path1;Name=comp113801_c0_seq1;Dir=indeterminatecoverage=89.3;identity=99.7;matches=291;mismatches=1;indels=0;unknowns=0;Target=comp113801_c0_seq1 318 27 .;CDS_Target=comp113801_c0_seq1 309 229 .;locus=RLOC_00019342
Chr2	stalkie_big_nohaplotig	exon	89199305	89199596	99	+	.	Parent=comp113801_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89199507	89199587	.	+	0	Parent=comp113801_c0_seq1.mrna1
Chr2	gffcl	locus	89199653	89199975	.	-	.	ID=RLOC_00019343;geneIDs=comp74805_c0_seq1.path1;transcripts=comp74805_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89199653	89199975	.	-	.	ID=comp74805_c0_seq1.mrna1;geneID=comp74805_c0_seq1.path1;Name=comp74805_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=323;mismatches=0;indels=0;unknowns=0;Target=comp74805_c0_seq1 323 1 .;CDS_Target=comp74805_c0_seq1 25 2 .;locus=RLOC_00019343
Chr2	stalkie_big_nohaplotig	exon	89199653	89199975	100	-	.	Parent=comp74805_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89199951	89199974	.	-	0	Parent=comp74805_c0_seq1.mrna1
Chr2	gffcl	locus	89200822	89202225	.	-	.	ID=RLOC_00019344;geneIDs=FBgn0039332.1.path1;transcripts=FBgn0039332.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89200822	89202225	.	-	.	ID=FBgn0039332.1.mrna1;geneID=FBgn0039332.1.path1;Name=FBgn0039332.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1400;mismatches=4;indels=0;unknowns=0;Target=FBgn0039332.1 1404 1 .;locus=RLOC_00019344
Chr2	stalkie_big_nohaplotig	exon	89200822	89202225	99	-	.	Parent=FBgn0039332.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89200822	89202225	.	-	0	Parent=FBgn0039332.1.mrna1
Chr2	gffcl	locus	89331313	89331600	.	+	.	ID=RLOC_00019345;geneIDs=comp147981_c0_seq1.path1;transcripts=comp147981_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89331313	89331600	.	+	.	ID=comp147981_c0_seq1.mrna1;geneID=comp147981_c0_seq1.path1;Name=comp147981_c0_seq1;Dir=indeterminatecoverage=98.0;identity=100.0;matches=288;mismatches=0;indels=0;unknowns=0;Target=comp147981_c0_seq1 288 1 .;locus=RLOC_00019345
Chr2	stalkie_big_nohaplotig	exon	89331313	89331600	100	+	.	Parent=comp147981_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89331313	89331600	.	+	0	Parent=comp147981_c0_seq1.mrna1
Chr2	gffcl	locus	89331969	89332352	.	-	.	ID=RLOC_00019346;geneIDs=comp113088_c0_seq1.path1;transcripts=comp113088_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89331969	89332352	.	-	.	ID=comp113088_c0_seq1.mrna1;geneID=comp113088_c0_seq1.path1;Name=comp113088_c0_seq1;Dir=indeterminatecoverage=98.7;identity=98.2;matches=379;mismatches=5;indels=2;unknowns=0;Target=comp113088_c0_seq1 386 1 .;CDS_Target=comp113088_c0_seq1 300 205 .;locus=RLOC_00019346
Chr2	stalkie_big_nohaplotig	exon	89331969	89332352	98	-	.	Parent=comp113088_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89332053	89332148	.	-	0	Parent=comp113088_c0_seq1.mrna1
Chr2	gffcl	locus	89479234	89479708	.	-	.	ID=RLOC_00019349;geneIDs=comp116103_c0_seq1.path1;transcripts=comp116103_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89479234	89479708	.	-	.	ID=comp116103_c0_seq1.mrna1;geneID=comp116103_c0_seq1.path1;Name=comp116103_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=463;mismatches=12;indels=1;unknowns=0;Target=comp116103_c0_seq1 476 1 .;CDS_Target=comp116103_c0_seq1 474 424 .;locus=RLOC_00019349
Chr2	stalkie_big_nohaplotig	exon	89479234	89479708	97	-	.	Parent=comp116103_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89479236	89479286	.	-	0	Parent=comp116103_c0_seq1.mrna1
Chr2	gffcl	locus	89479846	89483276	.	.	.	ID=RLOC_00019350;geneIDs=FBgn0039298.1.path1,comp142536_c0_seq1.path1;transcripts=FBgn0039298.1.mrna1,comp142536_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89479846	89483276	.	-	.	ID=FBgn0039298.1.mrna1;geneID=FBgn0039298.1.path1;Name=FBgn0039298.1;Dir=sensecoverage=100.0;identity=100.0;matches=774;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019350
Chr2	stalkie_big_nohaplotig	exon	89479846	89480144	100	-	.	Parent=FBgn0039298.1.mrna1;Target=FBgn0039298.1 476 774 +
Chr2	stalkie_big_nohaplotig	exon	89480218	89480357	100	-	.	Parent=FBgn0039298.1.mrna1;Target=FBgn0039298.1 336 475 +
Chr2	stalkie_big_nohaplotig	exon	89480690	89480840	100	-	.	Parent=FBgn0039298.1.mrna1;Target=FBgn0039298.1 185 335 +
Chr2	stalkie_big_nohaplotig	exon	89480907	89480990	100	-	.	Parent=FBgn0039298.1.mrna1;Target=FBgn0039298.1 101 184 +
Chr2	stalkie_big_nohaplotig	exon	89483177	89483276	100	-	.	Parent=FBgn0039298.1.mrna1;Target=FBgn0039298.1 1 100 +
Chr2	stalkie_big_nohaplotig	CDS	89479846	89480144	.	-	2	Parent=FBgn0039298.1.mrna1;Target=FBgn0039298.1 476 774 +
Chr2	stalkie_big_nohaplotig	CDS	89480218	89480357	.	-	1	Parent=FBgn0039298.1.mrna1;Target=FBgn0039298.1 336 475 +
Chr2	stalkie_big_nohaplotig	CDS	89480690	89480840	.	-	2	Parent=FBgn0039298.1.mrna1;Target=FBgn0039298.1 185 335 +
Chr2	stalkie_big_nohaplotig	CDS	89480907	89480990	.	-	2	Parent=FBgn0039298.1.mrna1;Target=FBgn0039298.1 101 184 +
Chr2	stalkie_big_nohaplotig	CDS	89483177	89483276	.	-	0	Parent=FBgn0039298.1.mrna1;Target=FBgn0039298.1 1 100 +
Chr2	stalkie_big_nohaplotig	mRNA	89480334	89480713	.	+	.	ID=comp142536_c0_seq1.mrna1;geneID=comp142536_c0_seq1.path1;Name=comp142536_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=379;mismatches=1;indels=1;unknowns=0;Target=comp142536_c0_seq1 381 1 .;CDS_Target=comp142536_c0_seq1 320 219 .;locus=RLOC_00019350
Chr2	stalkie_big_nohaplotig	exon	89480334	89480713	99	+	.	Parent=comp142536_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89480552	89480653	.	+	0	Parent=comp142536_c0_seq1.mrna1
Chr2	gffcl	locus	89482223	89482800	.	-	.	ID=RLOC_00019351;geneIDs=comp152563_c0_seq1.path1;transcripts=comp152563_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89482223	89482800	.	-	.	ID=comp152563_c0_seq1.mrna1;geneID=comp152563_c0_seq1.path1;Name=comp152563_c0_seq1;Dir=indeterminatecoverage=71.5;identity=97.6;matches=564;mismatches=7;indels=7;unknowns=0;Target=comp152563_c0_seq1 587 17 .;CDS_Target=comp152563_c0_seq1 150 19 .;locus=RLOC_00019351
Chr2	stalkie_big_nohaplotig	exon	89482223	89482800	97	-	.	Parent=comp152563_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89482667	89482798	.	-	0	Parent=comp152563_c0_seq1.mrna1
Chr2	gffcl	locus	89490148	89491032	.	-	.	ID=RLOC_00019352;geneIDs=Dv_FBgn0206941.2.path6;transcripts=Dv_FBgn0206941.2.mrna6
Chr2	stalkie_big_nohaplotig	mRNA	89490148	89491032	.	-	.	ID=Dv_FBgn0206941.2.mrna6;geneID=Dv_FBgn0206941.2.path6;Name=Dv_FBgn0206941.2;Dir=indeterminatecoverage=100.0;identity=99.8;matches=883;mismatches=2;indels=0;unknowns=0;Target=Dv_FBgn0206941.2 885 1 .;locus=RLOC_00019352
Chr2	stalkie_big_nohaplotig	exon	89490148	89491032	99	-	.	Parent=Dv_FBgn0206941.2.mrna6
Chr2	stalkie_big_nohaplotig	CDS	89490148	89491032	.	-	0	Parent=Dv_FBgn0206941.2.mrna6
Chr2	gffcl	locus	89534673	89536707	.	+	.	ID=RLOC_00019353;geneIDs=FBgn0039335.1.path1;transcripts=FBgn0039335.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89534673	89536707	.	+	.	ID=FBgn0039335.1.mrna1;geneID=FBgn0039335.1.path1;Name=FBgn0039335.1;Dir=sensecoverage=100.0;identity=99.9;matches=1910;mismatches=0;indels=1;unknowns=0;Target=FBgn0039335.1 3 101 +;locus=RLOC_00019353
Chr2	stalkie_big_nohaplotig	exon	89534673	89534787	99	+	.	Parent=FBgn0039335.1.mrna1;Target=FBgn0039335.1 1 116 +
Chr2	stalkie_big_nohaplotig	exon	89534850	89535177	100	+	.	Parent=FBgn0039335.1.mrna1;Target=FBgn0039335.1 117 444 +
Chr2	stalkie_big_nohaplotig	exon	89535241	89536707	100	+	.	Parent=FBgn0039335.1.mrna1;Target=FBgn0039335.1 445 1911 +
Chr2	stalkie_big_nohaplotig	CDS	89534675	89534772	.	+	0	Parent=FBgn0039335.1.mrna1
Chr2	gffcl	locus	89538988	89540202	.	+	.	ID=RLOC_00019354;geneIDs=FBgn0039336.1.path1;transcripts=FBgn0039336.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89538988	89540202	.	+	.	ID=FBgn0039336.1.mrna1;geneID=FBgn0039336.1.path1;Name=FBgn0039336.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1215;mismatches=0;indels=0;unknowns=0;Target=FBgn0039336.1 1215 1 .;locus=RLOC_00019354
Chr2	stalkie_big_nohaplotig	exon	89538988	89540202	100	+	.	Parent=FBgn0039336.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89538988	89540202	.	+	0	Parent=FBgn0039336.1.mrna1
Chr2	gffcl	locus	89542088	90764295	.	.	.	ID=RLOC_00019355;geneIDs=comp150967_c0_seq1.path1,comp150967_c0_seq1.path2;transcripts=comp150967_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89542088	90764295	.	+	.	ID=comp150967_c0_seq1.mrna1;geneID=comp150967_c0_seq1.path1;Name=comp150967_c0_seq1;Dir=indeterminatecoverage=68.5;identity=99.4;matches=479;mismatches=3;indels=0;unknowns=0;Target=comp150967_c0_seq1 70 2 .;locus=RLOC_00019355
Chr2	stalkie_big_nohaplotig	exon	89542088	89542508	99	+	.	Parent=comp150967_c0_seq1.mrna1;Target=comp150967_c0_seq1 421 1 .
Chr2	stalkie_big_nohaplotig	exon	90696000	90696003	100	+	.	Parent=comp150967_c0_seq1.mrna1;Target=comp150967_c0_seq1 425 422 .
Chr2	stalkie_big_nohaplotig	exon	90701486	90701489	100	+	.	Parent=comp150967_c0_seq1.mrna1;Target=comp150967_c0_seq1 429 426 .
Chr2	stalkie_big_nohaplotig	exon	90709117	90709118	100	+	.	Parent=comp150967_c0_seq1.mrna1;Target=comp150967_c0_seq1 431 430 .
Chr2	stalkie_big_nohaplotig	exon	90714339	90714345	100	+	.	Parent=comp150967_c0_seq1.mrna1;Target=comp150967_c0_seq1 438 432 .
Chr2	stalkie_big_nohaplotig	exon	90720939	90720940	100	+	.	Parent=comp150967_c0_seq1.mrna1;Target=comp150967_c0_seq1 440 439 .
Chr2	stalkie_big_nohaplotig	exon	90729089	90729099	100	+	.	Parent=comp150967_c0_seq1.mrna1;Target=comp150967_c0_seq1 451 441 .
Chr2	stalkie_big_nohaplotig	exon	90729226	90729241	87	+	.	Parent=comp150967_c0_seq1.mrna1;Target=comp150967_c0_seq1 467 452 .
Chr2	stalkie_big_nohaplotig	exon	90729734	90729739	100	+	.	Parent=comp150967_c0_seq1.mrna1;Target=comp150967_c0_seq1 473 468 .
Chr2	stalkie_big_nohaplotig	exon	90736784	90736787	100	+	.	Parent=comp150967_c0_seq1.mrna1;Target=comp150967_c0_seq1 477 474 .
Chr2	stalkie_big_nohaplotig	exon	90742871	90742873	100	+	.	Parent=comp150967_c0_seq1.mrna1;Target=comp150967_c0_seq1 480 478 .
Chr2	stalkie_big_nohaplotig	exon	90764294	90764295	100	+	.	Parent=comp150967_c0_seq1.mrna1;Target=comp150967_c0_seq1 482 481 .
Chr2	stalkie_big_nohaplotig	CDS	89542089	89542157	.	+	0	Parent=comp150967_c0_seq1.mrna1
Chr2	gffcl	locus	89543149	89564740	.	-	.	ID=RLOC_00019356;geneIDs=FBgn0037702.1.path1;transcripts=FBgn0037702.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89543149	89564740	.	-	.	ID=FBgn0037702.1.mrna1;geneID=FBgn0037702.1.path1;Name=FBgn0037702.1;Dir=sensecoverage=100.0;identity=100.0;matches=3300;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019356
Chr2	stalkie_big_nohaplotig	exon	89543149	89543243	100	-	.	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 3206 3300 +
Chr2	stalkie_big_nohaplotig	exon	89543301	89543530	100	-	.	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 2976 3205 +
Chr2	stalkie_big_nohaplotig	exon	89544732	89545067	100	-	.	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 2640 2975 +
Chr2	stalkie_big_nohaplotig	exon	89550732	89550905	100	-	.	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 2466 2639 +
Chr2	stalkie_big_nohaplotig	exon	89550984	89551358	100	-	.	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 2091 2465 +
Chr2	stalkie_big_nohaplotig	exon	89552094	89552236	100	-	.	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 1948 2090 +
Chr2	stalkie_big_nohaplotig	exon	89552333	89552505	100	-	.	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 1775 1947 +
Chr2	stalkie_big_nohaplotig	exon	89552562	89552899	100	-	.	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 1437 1774 +
Chr2	stalkie_big_nohaplotig	exon	89553965	89554070	100	-	.	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 1331 1436 +
Chr2	stalkie_big_nohaplotig	exon	89558696	89559223	100	-	.	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 803 1330 +
Chr2	stalkie_big_nohaplotig	exon	89560835	89560931	100	-	.	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 706 802 +
Chr2	stalkie_big_nohaplotig	exon	89560999	89561097	100	-	.	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 607 705 +
Chr2	stalkie_big_nohaplotig	exon	89561185	89561751	100	-	.	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 40 606 +
Chr2	stalkie_big_nohaplotig	exon	89564702	89564740	100	-	.	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 1 39 +
Chr2	stalkie_big_nohaplotig	CDS	89543149	89543243	.	-	2	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 3206 3300 +
Chr2	stalkie_big_nohaplotig	CDS	89543301	89543530	.	-	1	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 2976 3205 +
Chr2	stalkie_big_nohaplotig	CDS	89544732	89545067	.	-	1	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 2640 2975 +
Chr2	stalkie_big_nohaplotig	CDS	89550732	89550905	.	-	1	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 2466 2639 +
Chr2	stalkie_big_nohaplotig	CDS	89550984	89551358	.	-	1	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 2091 2465 +
Chr2	stalkie_big_nohaplotig	CDS	89552094	89552236	.	-	0	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 1948 2090 +
Chr2	stalkie_big_nohaplotig	CDS	89552333	89552505	.	-	2	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 1775 1947 +
Chr2	stalkie_big_nohaplotig	CDS	89552562	89552899	.	-	1	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 1437 1774 +
Chr2	stalkie_big_nohaplotig	CDS	89553965	89554070	.	-	2	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 1331 1436 +
Chr2	stalkie_big_nohaplotig	CDS	89558696	89559223	.	-	2	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 803 1330 +
Chr2	stalkie_big_nohaplotig	CDS	89560835	89560931	.	-	0	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 706 802 +
Chr2	stalkie_big_nohaplotig	CDS	89560999	89561097	.	-	0	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 607 705 +
Chr2	stalkie_big_nohaplotig	CDS	89561185	89561751	.	-	0	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 40 606 +
Chr2	stalkie_big_nohaplotig	CDS	89564702	89564740	.	-	0	Parent=FBgn0037702.1.mrna1;Target=FBgn0037702.1 1 39 +
Chr2	gffcl	locus	89554502	89555499	.	+	.	ID=RLOC_00019357;geneIDs=comp143284_c0_seq1.path1;transcripts=comp143284_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89554502	89555499	.	+	.	ID=comp143284_c0_seq1.mrna1;geneID=comp143284_c0_seq1.path1;Name=comp143284_c0_seq1;Dir=indeterminatecoverage=81.6;identity=95.9;matches=985;mismatches=11;indels=31;unknowns=0;Target=comp143284_c0_seq1 1025 1 .;CDS_Target=comp143284_c0_seq1 106 2 .;locus=RLOC_00019357
Chr2	stalkie_big_nohaplotig	exon	89554502	89555499	95	+	.	Parent=comp143284_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89554503	89554607	.	+	0	Parent=comp143284_c0_seq1.mrna1
Chr2	gffcl	locus	89566659	89570597	.	-	.	ID=RLOC_00019358;geneIDs=FBgn0037703.2.path1;transcripts=FBgn0037703.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89566659	89570597	.	-	.	ID=FBgn0037703.2.mrna1;geneID=FBgn0037703.2.path1;Name=FBgn0037703.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=3939;mismatches=0;indels=0;unknowns=0;Target=FBgn0037703.2 3939 1 .;locus=RLOC_00019358
Chr2	stalkie_big_nohaplotig	exon	89566659	89570597	100	-	.	Parent=FBgn0037703.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89566659	89570597	.	-	0	Parent=FBgn0037703.2.mrna1
Chr2	gffcl	locus	89593862	89595243	.	+	.	ID=RLOC_00019360;geneIDs=FBgn0014022.1.path1;transcripts=FBgn0014022.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89593862	89595243	.	+	.	ID=FBgn0014022.1.mrna1;geneID=FBgn0014022.1.path1;Name=FBgn0014022.1;Dir=sensecoverage=100.0;identity=99.5;matches=1310;mismatches=3;indels=4;unknowns=0;locus=RLOC_00019360
Chr2	stalkie_big_nohaplotig	exon	89593862	89594065	100	+	.	Parent=FBgn0014022.1.mrna1;Target=FBgn0014022.1 1 204 +
Chr2	stalkie_big_nohaplotig	exon	89594135	89595243	99	+	.	Parent=FBgn0014022.1.mrna1;Target=FBgn0014022.1 205 1317 +
Chr2	stalkie_big_nohaplotig	CDS	89593862	89594065	.	+	0	Parent=FBgn0014022.1.mrna1;Target=FBgn0014022.1 1 204 +
Chr2	stalkie_big_nohaplotig	CDS	89594135	89595243	.	+	0	Parent=FBgn0014022.1.mrna1;Target=FBgn0014022.1 205 1317 +
Chr2	gffcl	locus	89595514	89596591	.	-	.	ID=RLOC_00019361;geneIDs=FBgn0014023.1.path1;transcripts=FBgn0014023.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89595514	89596591	.	-	.	ID=FBgn0014023.1.mrna1;geneID=FBgn0014023.1.path1;Name=FBgn0014023.1;Dir=sensecoverage=100.0;identity=100.0;matches=825;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019361
Chr2	stalkie_big_nohaplotig	exon	89595514	89595655	100	-	.	Parent=FBgn0014023.1.mrna1;Target=FBgn0014023.1 684 825 +
Chr2	stalkie_big_nohaplotig	exon	89595720	89595860	100	-	.	Parent=FBgn0014023.1.mrna1;Target=FBgn0014023.1 543 683 +
Chr2	stalkie_big_nohaplotig	exon	89595935	89596071	100	-	.	Parent=FBgn0014023.1.mrna1;Target=FBgn0014023.1 406 542 +
Chr2	stalkie_big_nohaplotig	exon	89596126	89596420	100	-	.	Parent=FBgn0014023.1.mrna1;Target=FBgn0014023.1 111 405 +
Chr2	stalkie_big_nohaplotig	exon	89596482	89596591	100	-	.	Parent=FBgn0014023.1.mrna1;Target=FBgn0014023.1 1 110 +
Chr2	stalkie_big_nohaplotig	CDS	89595514	89595655	.	-	1	Parent=FBgn0014023.1.mrna1;Target=FBgn0014023.1 684 825 +
Chr2	stalkie_big_nohaplotig	CDS	89595720	89595860	.	-	1	Parent=FBgn0014023.1.mrna1;Target=FBgn0014023.1 543 683 +
Chr2	stalkie_big_nohaplotig	CDS	89595935	89596071	.	-	0	Parent=FBgn0014023.1.mrna1;Target=FBgn0014023.1 406 542 +
Chr2	stalkie_big_nohaplotig	CDS	89596126	89596420	.	-	1	Parent=FBgn0014023.1.mrna1;Target=FBgn0014023.1 111 405 +
Chr2	stalkie_big_nohaplotig	CDS	89596482	89596591	.	-	0	Parent=FBgn0014023.1.mrna1;Target=FBgn0014023.1 1 110 +
Chr2	gffcl	locus	89597655	89602844	.	+	.	ID=RLOC_00019362;geneIDs=FBgn0038953.1.path1;transcripts=FBgn0038953.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89597655	89602844	.	+	.	ID=FBgn0038953.1.mrna1;geneID=FBgn0038953.1.path1;Name=FBgn0038953.1;Dir=sensecoverage=100.0;identity=100.0;matches=3551;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019362
Chr2	stalkie_big_nohaplotig	exon	89597655	89599603	99	+	.	Parent=FBgn0038953.1.mrna1;Target=FBgn0038953.1 1 1949 +
Chr2	stalkie_big_nohaplotig	exon	89600470	89600664	100	+	.	Parent=FBgn0038953.1.mrna1;Target=FBgn0038953.1 1950 2144 +
Chr2	stalkie_big_nohaplotig	exon	89600766	89601135	100	+	.	Parent=FBgn0038953.1.mrna1;Target=FBgn0038953.1 2145 2514 +
Chr2	stalkie_big_nohaplotig	exon	89601362	89601546	100	+	.	Parent=FBgn0038953.1.mrna1;Target=FBgn0038953.1 2515 2699 +
Chr2	stalkie_big_nohaplotig	exon	89601597	89601981	100	+	.	Parent=FBgn0038953.1.mrna1;Target=FBgn0038953.1 2700 3084 +
Chr2	stalkie_big_nohaplotig	exon	89602049	89602185	100	+	.	Parent=FBgn0038953.1.mrna1;Target=FBgn0038953.1 3085 3221 +
Chr2	stalkie_big_nohaplotig	exon	89602452	89602622	100	+	.	Parent=FBgn0038953.1.mrna1;Target=FBgn0038953.1 3222 3392 +
Chr2	stalkie_big_nohaplotig	exon	89602685	89602844	100	+	.	Parent=FBgn0038953.1.mrna1;Target=FBgn0038953.1 3393 3552 +
Chr2	stalkie_big_nohaplotig	CDS	89597655	89599603	.	+	0	Parent=FBgn0038953.1.mrna1;Target=FBgn0038953.1 1 1949 +
Chr2	stalkie_big_nohaplotig	CDS	89600470	89600664	.	+	1	Parent=FBgn0038953.1.mrna1;Target=FBgn0038953.1 1950 2144 +
Chr2	stalkie_big_nohaplotig	CDS	89600766	89601135	.	+	1	Parent=FBgn0038953.1.mrna1;Target=FBgn0038953.1 2145 2514 +
Chr2	stalkie_big_nohaplotig	CDS	89601362	89601546	.	+	0	Parent=FBgn0038953.1.mrna1;Target=FBgn0038953.1 2515 2699 +
Chr2	stalkie_big_nohaplotig	CDS	89601597	89601981	.	+	1	Parent=FBgn0038953.1.mrna1;Target=FBgn0038953.1 2700 3084 +
Chr2	stalkie_big_nohaplotig	CDS	89602049	89602185	.	+	0	Parent=FBgn0038953.1.mrna1;Target=FBgn0038953.1 3085 3221 +
Chr2	stalkie_big_nohaplotig	CDS	89602452	89602622	.	+	1	Parent=FBgn0038953.1.mrna1;Target=FBgn0038953.1 3222 3392 +
Chr2	stalkie_big_nohaplotig	CDS	89602685	89602844	.	+	1	Parent=FBgn0038953.1.mrna1;Target=FBgn0038953.1 3393 3552 +
Chr2	gffcl	locus	89605663	89610149	.	+	.	ID=RLOC_00019363;geneIDs=FBgn0260010.1.path1,comp135706_c0_seq1.path1,comp158633_c0_seq1.path1,comp159120_c1_seq1.path1;transcripts=FBgn0260010.1.mrna1,comp158633_c0_seq1.mrna1,comp135706_c0_seq1.mrna1,comp159120_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89605663	89609897	.	+	.	ID=FBgn0260010.1.mrna1;geneID=FBgn0260010.1.path1;Name=FBgn0260010.1;Dir=sensecoverage=100.0;identity=100.0;matches=1803;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019363
Chr2	stalkie_big_nohaplotig	exon	89605663	89605687	100	+	.	Parent=FBgn0260010.1.mrna1;Target=FBgn0260010.1 1 25 +
Chr2	stalkie_big_nohaplotig	exon	89605882	89606380	100	+	.	Parent=FBgn0260010.1.mrna1;Target=FBgn0260010.1 26 524 +
Chr2	stalkie_big_nohaplotig	exon	89607710	89607848	100	+	.	Parent=FBgn0260010.1.mrna1;Target=FBgn0260010.1 525 663 +
Chr2	stalkie_big_nohaplotig	exon	89608609	89609556	100	+	.	Parent=FBgn0260010.1.mrna1;Target=FBgn0260010.1 664 1611 +
Chr2	stalkie_big_nohaplotig	exon	89609634	89609769	100	+	.	Parent=FBgn0260010.1.mrna1;Target=FBgn0260010.1 1612 1747 +
Chr2	stalkie_big_nohaplotig	exon	89609842	89609897	100	+	.	Parent=FBgn0260010.1.mrna1;Target=FBgn0260010.1 1748 1803 +
Chr2	stalkie_big_nohaplotig	CDS	89605663	89605687	.	+	0	Parent=FBgn0260010.1.mrna1;Target=FBgn0260010.1 1 25 +
Chr2	stalkie_big_nohaplotig	CDS	89605882	89606380	.	+	2	Parent=FBgn0260010.1.mrna1;Target=FBgn0260010.1 26 524 +
Chr2	stalkie_big_nohaplotig	CDS	89607710	89607848	.	+	1	Parent=FBgn0260010.1.mrna1;Target=FBgn0260010.1 525 663 +
Chr2	stalkie_big_nohaplotig	CDS	89608609	89609556	.	+	0	Parent=FBgn0260010.1.mrna1;Target=FBgn0260010.1 664 1611 +
Chr2	stalkie_big_nohaplotig	CDS	89609634	89609769	.	+	0	Parent=FBgn0260010.1.mrna1;Target=FBgn0260010.1 1612 1747 +
Chr2	stalkie_big_nohaplotig	CDS	89609842	89609897	.	+	2	Parent=FBgn0260010.1.mrna1;Target=FBgn0260010.1 1748 1803 +
Chr2	stalkie_big_nohaplotig	mRNA	89606358	89607732	.	+	.	ID=comp158633_c0_seq1.mrna1;geneID=comp158633_c0_seq1.path1;Name=comp158633_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1375;mismatches=0;indels=1;unknowns=0;Target=comp158633_c0_seq1 1376 1 .;CDS_Target=comp158633_c0_seq1 901 749 .;locus=RLOC_00019363
Chr2	stalkie_big_nohaplotig	exon	89606358	89607732	99	+	.	Parent=comp158633_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89607105	89607257	.	+	0	Parent=comp158633_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89607826	89608382	.	+	.	ID=comp135706_c0_seq1.mrna1;geneID=comp135706_c0_seq1.path1;Name=comp135706_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=554;mismatches=3;indels=0;unknowns=0;Target=comp135706_c0_seq1 557 1 .;CDS_Target=comp135706_c0_seq1 101 3 .;locus=RLOC_00019363
Chr2	stalkie_big_nohaplotig	exon	89607826	89608382	99	+	.	Parent=comp135706_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89607828	89607926	.	+	0	Parent=comp135706_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89608392	89610149	.	+	.	ID=comp159120_c1_seq1.mrna1;geneID=comp159120_c1_seq1.path1;Name=comp159120_c1_seq1;Dir=sensecoverage=57.8;identity=99.7;matches=1604;mismatches=5;indels=0;unknowns=0;locus=RLOC_00019363
Chr2	stalkie_big_nohaplotig	exon	89608392	89609556	99	+	.	Parent=comp159120_c1_seq1.mrna1;Target=comp159120_c1_seq1 1178 2342 +
Chr2	stalkie_big_nohaplotig	exon	89609634	89609769	100	+	.	Parent=comp159120_c1_seq1.mrna1;Target=comp159120_c1_seq1 2343 2478 +
Chr2	stalkie_big_nohaplotig	exon	89609842	89610149	99	+	.	Parent=comp159120_c1_seq1.mrna1;Target=comp159120_c1_seq1 2479 2786 +
Chr2	stalkie_big_nohaplotig	CDS	89608765	89609556	.	+	0	Parent=comp159120_c1_seq1.mrna1;Target=comp159120_c1_seq1 1551 2342 +
Chr2	stalkie_big_nohaplotig	CDS	89609634	89609769	.	+	0	Parent=comp159120_c1_seq1.mrna1;Target=comp159120_c1_seq1 2343 2478 +
Chr2	stalkie_big_nohaplotig	CDS	89609842	89609900	.	+	2	Parent=comp159120_c1_seq1.mrna1;Target=comp159120_c1_seq1 2479 2537 +
Chr2	gffcl	locus	89611635	89612609	.	-	.	ID=RLOC_00019364;geneIDs=FBgn0037700.1.path1;transcripts=FBgn0037700.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89611635	89612609	.	-	.	ID=FBgn0037700.1.mrna1;geneID=FBgn0037700.1.path1;Name=FBgn0037700.1;Dir=sensecoverage=100.0;identity=100.0;matches=909;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019364
Chr2	stalkie_big_nohaplotig	exon	89611635	89612507	100	-	.	Parent=FBgn0037700.1.mrna1;Target=FBgn0037700.1 37 909 +
Chr2	stalkie_big_nohaplotig	exon	89612574	89612609	100	-	.	Parent=FBgn0037700.1.mrna1;Target=FBgn0037700.1 1 36 +
Chr2	stalkie_big_nohaplotig	CDS	89611635	89612507	.	-	0	Parent=FBgn0037700.1.mrna1;Target=FBgn0037700.1 37 909 +
Chr2	stalkie_big_nohaplotig	CDS	89612574	89612609	.	-	0	Parent=FBgn0037700.1.mrna1;Target=FBgn0037700.1 1 36 +
Chr2	gffcl	locus	89646126	89647642	.	+	.	ID=RLOC_00019366;geneIDs=comp162611_c0_seq1.path1;transcripts=comp162611_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89646126	89647642	.	+	.	ID=comp162611_c0_seq1.mrna1;geneID=comp162611_c0_seq1.path1;Name=comp162611_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.1;matches=1462;mismatches=11;indels=49;unknowns=0;Target=comp162611_c0_seq1 1478 1 .;CDS_Target=comp162611_c0_seq1 327 112 .;locus=RLOC_00019366
Chr2	stalkie_big_nohaplotig	exon	89646126	89647642	96	+	.	Parent=comp162611_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89646237	89646452	.	+	0	Parent=comp162611_c0_seq1.mrna1
Chr2	gffcl	locus	89649182	89654013	.	-	.	ID=RLOC_00019367;geneIDs=FBgn0037363.1.path1;transcripts=FBgn0037363.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89649182	89654013	.	-	.	ID=FBgn0037363.1.mrna1;geneID=FBgn0037363.1.path1;Name=FBgn0037363.1;Dir=sensecoverage=100.0;identity=100.0;matches=4179;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019367
Chr2	stalkie_big_nohaplotig	exon	89649182	89649867	100	-	.	Parent=FBgn0037363.1.mrna1;Target=FBgn0037363.1 3494 4179 +
Chr2	stalkie_big_nohaplotig	exon	89650330	89650429	100	-	.	Parent=FBgn0037363.1.mrna1;Target=FBgn0037363.1 3394 3493 +
Chr2	stalkie_big_nohaplotig	exon	89650496	89650796	100	-	.	Parent=FBgn0037363.1.mrna1;Target=FBgn0037363.1 3093 3393 +
Chr2	stalkie_big_nohaplotig	exon	89650860	89652439	100	-	.	Parent=FBgn0037363.1.mrna1;Target=FBgn0037363.1 1513 3092 +
Chr2	stalkie_big_nohaplotig	exon	89652502	89654013	100	-	.	Parent=FBgn0037363.1.mrna1;Target=FBgn0037363.1 1 1512 +
Chr2	stalkie_big_nohaplotig	CDS	89649182	89649867	.	-	2	Parent=FBgn0037363.1.mrna1;Target=FBgn0037363.1 3494 4179 +
Chr2	stalkie_big_nohaplotig	CDS	89650330	89650429	.	-	0	Parent=FBgn0037363.1.mrna1;Target=FBgn0037363.1 3394 3493 +
Chr2	stalkie_big_nohaplotig	CDS	89650496	89650796	.	-	1	Parent=FBgn0037363.1.mrna1;Target=FBgn0037363.1 3093 3393 +
Chr2	stalkie_big_nohaplotig	CDS	89650860	89652439	.	-	0	Parent=FBgn0037363.1.mrna1;Target=FBgn0037363.1 1513 3092 +
Chr2	stalkie_big_nohaplotig	CDS	89652502	89654013	.	-	0	Parent=FBgn0037363.1.mrna1;Target=FBgn0037363.1 1 1512 +
Chr2	gffcl	locus	89685577	89704149	.	+	.	ID=RLOC_00019368;geneIDs=FBgn0046222.1.path1;transcripts=FBgn0046222.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89685577	89704149	.	+	.	ID=FBgn0046222.1.mrna1;geneID=FBgn0046222.1.path1;Name=FBgn0046222.1;Dir=sensecoverage=100.0;identity=100.0;matches=2634;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019368
Chr2	stalkie_big_nohaplotig	exon	89685577	89685885	100	+	.	Parent=FBgn0046222.1.mrna1;Target=FBgn0046222.1 1 309 +
Chr2	stalkie_big_nohaplotig	exon	89685968	89686237	100	+	.	Parent=FBgn0046222.1.mrna1;Target=FBgn0046222.1 310 579 +
Chr2	stalkie_big_nohaplotig	exon	89687954	89688105	100	+	.	Parent=FBgn0046222.1.mrna1;Target=FBgn0046222.1 580 731 +
Chr2	stalkie_big_nohaplotig	exon	89698427	89698524	100	+	.	Parent=FBgn0046222.1.mrna1;Target=FBgn0046222.1 732 829 +
Chr2	stalkie_big_nohaplotig	exon	89701925	89702051	100	+	.	Parent=FBgn0046222.1.mrna1;Target=FBgn0046222.1 830 956 +
Chr2	stalkie_big_nohaplotig	exon	89702255	89702488	100	+	.	Parent=FBgn0046222.1.mrna1;Target=FBgn0046222.1 957 1190 +
Chr2	stalkie_big_nohaplotig	exon	89702633	89702844	100	+	.	Parent=FBgn0046222.1.mrna1;Target=FBgn0046222.1 1191 1402 +
Chr2	stalkie_big_nohaplotig	exon	89702918	89704149	100	+	.	Parent=FBgn0046222.1.mrna1;Target=FBgn0046222.1 1403 2634 +
Chr2	stalkie_big_nohaplotig	CDS	89685577	89685885	.	+	0	Parent=FBgn0046222.1.mrna1;Target=FBgn0046222.1 1 309 +
Chr2	stalkie_big_nohaplotig	CDS	89685968	89686237	.	+	0	Parent=FBgn0046222.1.mrna1;Target=FBgn0046222.1 310 579 +
Chr2	stalkie_big_nohaplotig	CDS	89687954	89688105	.	+	0	Parent=FBgn0046222.1.mrna1;Target=FBgn0046222.1 580 731 +
Chr2	stalkie_big_nohaplotig	CDS	89698427	89698524	.	+	1	Parent=FBgn0046222.1.mrna1;Target=FBgn0046222.1 732 829 +
Chr2	stalkie_big_nohaplotig	CDS	89701925	89702051	.	+	2	Parent=FBgn0046222.1.mrna1;Target=FBgn0046222.1 830 956 +
Chr2	stalkie_big_nohaplotig	CDS	89702255	89702488	.	+	1	Parent=FBgn0046222.1.mrna1;Target=FBgn0046222.1 957 1190 +
Chr2	stalkie_big_nohaplotig	CDS	89702633	89702844	.	+	1	Parent=FBgn0046222.1.mrna1;Target=FBgn0046222.1 1191 1402 +
Chr2	stalkie_big_nohaplotig	CDS	89702918	89704149	.	+	2	Parent=FBgn0046222.1.mrna1;Target=FBgn0046222.1 1403 2634 +
Chr2	gffcl	locus	89706342	89709492	.	-	.	ID=RLOC_00019369;geneIDs=FBgn0010772.1.path1;transcripts=FBgn0010772.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89706342	89709492	.	-	.	ID=FBgn0010772.1.mrna1;geneID=FBgn0010772.1.path1;Name=FBgn0010772.1;Dir=sensecoverage=100.0;identity=100.0;matches=2436;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019369
Chr2	stalkie_big_nohaplotig	exon	89706342	89706942	100	-	.	Parent=FBgn0010772.1.mrna1;Target=FBgn0010772.1 1836 2436 +
Chr2	stalkie_big_nohaplotig	exon	89707006	89707628	100	-	.	Parent=FBgn0010772.1.mrna1;Target=FBgn0010772.1 1213 1835 +
Chr2	stalkie_big_nohaplotig	exon	89707702	89707909	100	-	.	Parent=FBgn0010772.1.mrna1;Target=FBgn0010772.1 1005 1212 +
Chr2	stalkie_big_nohaplotig	exon	89708372	89708629	100	-	.	Parent=FBgn0010772.1.mrna1;Target=FBgn0010772.1 747 1004 +
Chr2	stalkie_big_nohaplotig	exon	89708682	89709142	100	-	.	Parent=FBgn0010772.1.mrna1;Target=FBgn0010772.1 286 746 +
Chr2	stalkie_big_nohaplotig	exon	89709208	89709492	100	-	.	Parent=FBgn0010772.1.mrna1;Target=FBgn0010772.1 1 285 +
Chr2	stalkie_big_nohaplotig	CDS	89706342	89706942	.	-	1	Parent=FBgn0010772.1.mrna1;Target=FBgn0010772.1 1836 2436 +
Chr2	stalkie_big_nohaplotig	CDS	89707006	89707628	.	-	0	Parent=FBgn0010772.1.mrna1;Target=FBgn0010772.1 1213 1835 +
Chr2	stalkie_big_nohaplotig	CDS	89707702	89707909	.	-	1	Parent=FBgn0010772.1.mrna1;Target=FBgn0010772.1 1005 1212 +
Chr2	stalkie_big_nohaplotig	CDS	89708372	89708629	.	-	1	Parent=FBgn0010772.1.mrna1;Target=FBgn0010772.1 747 1004 +
Chr2	stalkie_big_nohaplotig	CDS	89708682	89709142	.	-	0	Parent=FBgn0010772.1.mrna1;Target=FBgn0010772.1 286 746 +
Chr2	stalkie_big_nohaplotig	CDS	89709208	89709492	.	-	0	Parent=FBgn0010772.1.mrna1;Target=FBgn0010772.1 1 285 +
Chr2	gffcl	locus	89756337	89822814	.	+	.	ID=RLOC_00019370;geneIDs=FBgn0027570.1.path1,comp109972_c0_seq1.path1,comp145933_c1_seq1.path1;transcripts=comp109972_c0_seq1.mrna1,FBgn0027570.1.mrna1,comp145933_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89756337	89811046	.	+	.	ID=comp109972_c0_seq1.mrna1;geneID=comp109972_c0_seq1.path1;Name=comp109972_c0_seq1;Dir=sensecoverage=100.0;identity=98.4;matches=303;mismatches=5;indels=0;unknowns=0;locus=RLOC_00019370
Chr2	stalkie_big_nohaplotig	exon	89756337	89756595	98	+	.	Parent=comp109972_c0_seq1.mrna1;Target=comp109972_c0_seq1 1 259 +
Chr2	stalkie_big_nohaplotig	exon	89810998	89811046	97	+	.	Parent=comp109972_c0_seq1.mrna1;Target=comp109972_c0_seq1 260 308 +
Chr2	stalkie_big_nohaplotig	CDS	89756477	89756595	.	+	0	Parent=comp109972_c0_seq1.mrna1;Target=comp109972_c0_seq1 141 259 +
Chr2	stalkie_big_nohaplotig	CDS	89810998	89811046	.	+	1	Parent=comp109972_c0_seq1.mrna1;Target=comp109972_c0_seq1 260 308 +
Chr2	stalkie_big_nohaplotig	mRNA	89810998	89822814	.	+	.	ID=FBgn0027570.1.mrna1;geneID=FBgn0027570.1.path1;Name=FBgn0027570.1;Dir=sensecoverage=99.1;identity=100.0;matches=2296;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019370
Chr2	stalkie_big_nohaplotig	exon	89810998	89811131	100	+	.	Parent=FBgn0027570.1.mrna1;Target=FBgn0027570.1 21 154 +
Chr2	stalkie_big_nohaplotig	exon	89812709	89813104	100	+	.	Parent=FBgn0027570.1.mrna1;Target=FBgn0027570.1 155 550 +
Chr2	stalkie_big_nohaplotig	exon	89813172	89813386	100	+	.	Parent=FBgn0027570.1.mrna1;Target=FBgn0027570.1 551 765 +
Chr2	stalkie_big_nohaplotig	exon	89813443	89813619	100	+	.	Parent=FBgn0027570.1.mrna1;Target=FBgn0027570.1 766 942 +
Chr2	stalkie_big_nohaplotig	exon	89815448	89815824	100	+	.	Parent=FBgn0027570.1.mrna1;Target=FBgn0027570.1 943 1319 +
Chr2	stalkie_big_nohaplotig	exon	89820470	89820879	100	+	.	Parent=FBgn0027570.1.mrna1;Target=FBgn0027570.1 1320 1729 +
Chr2	stalkie_big_nohaplotig	exon	89820944	89821194	100	+	.	Parent=FBgn0027570.1.mrna1;Target=FBgn0027570.1 1730 1980 +
Chr2	stalkie_big_nohaplotig	exon	89821299	89821485	100	+	.	Parent=FBgn0027570.1.mrna1;Target=FBgn0027570.1 1981 2167 +
Chr2	stalkie_big_nohaplotig	exon	89822666	89822814	100	+	.	Parent=FBgn0027570.1.mrna1;Target=FBgn0027570.1 2168 2316 +
Chr2	stalkie_big_nohaplotig	CDS	89810999	89811131	.	+	0	Parent=FBgn0027570.1.mrna1;Target=FBgn0027570.1 22 154 +
Chr2	stalkie_big_nohaplotig	CDS	89812709	89813104	.	+	2	Parent=FBgn0027570.1.mrna1;Target=FBgn0027570.1 155 550 +
Chr2	stalkie_big_nohaplotig	CDS	89813172	89813386	.	+	2	Parent=FBgn0027570.1.mrna1;Target=FBgn0027570.1 551 765 +
Chr2	stalkie_big_nohaplotig	CDS	89813443	89813619	.	+	0	Parent=FBgn0027570.1.mrna1;Target=FBgn0027570.1 766 942 +
Chr2	stalkie_big_nohaplotig	CDS	89815448	89815824	.	+	0	Parent=FBgn0027570.1.mrna1;Target=FBgn0027570.1 943 1319 +
Chr2	stalkie_big_nohaplotig	CDS	89820470	89820879	.	+	1	Parent=FBgn0027570.1.mrna1;Target=FBgn0027570.1 1320 1729 +
Chr2	stalkie_big_nohaplotig	CDS	89820944	89821194	.	+	2	Parent=FBgn0027570.1.mrna1;Target=FBgn0027570.1 1730 1980 +
Chr2	stalkie_big_nohaplotig	CDS	89821299	89821485	.	+	0	Parent=FBgn0027570.1.mrna1;Target=FBgn0027570.1 1981 2167 +
Chr2	stalkie_big_nohaplotig	CDS	89822666	89822814	.	+	2	Parent=FBgn0027570.1.mrna1;Target=FBgn0027570.1 2168 2316 +
Chr2	stalkie_big_nohaplotig	mRNA	89815801	89816332	.	+	.	ID=comp145933_c1_seq1.mrna1;geneID=comp145933_c1_seq1.path1;Name=comp145933_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=532;mismatches=0;indels=0;unknowns=0;Target=comp145933_c1_seq1 532 1 .;CDS_Target=comp145933_c1_seq1 530 456 .;locus=RLOC_00019370
Chr2	stalkie_big_nohaplotig	exon	89815801	89816332	100	+	.	Parent=comp145933_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89816256	89816330	.	+	0	Parent=comp145933_c1_seq1.mrna1
Chr2	gffcl	locus	89817359	89818326	.	-	.	ID=RLOC_00019371;geneIDs=comp151446_c0_seq1.path1;transcripts=comp151446_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89817359	89818326	.	-	.	ID=comp151446_c0_seq1.mrna1;geneID=comp151446_c0_seq1.path1;Name=comp151446_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=963;mismatches=4;indels=1;unknowns=0;Target=comp151446_c0_seq1 967 1 .;CDS_Target=comp151446_c0_seq1 421 344 .;locus=RLOC_00019371
Chr2	stalkie_big_nohaplotig	exon	89817359	89818326	99	-	.	Parent=comp151446_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89817905	89817982	.	-	0	Parent=comp151446_c0_seq1.mrna1
Chr2	gffcl	locus	89823162	89823453	.	-	.	ID=RLOC_00019372;geneIDs=comp129678_c0_seq1.path1;transcripts=comp129678_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89823162	89823453	.	-	.	ID=comp129678_c0_seq1.mrna1;geneID=comp129678_c0_seq1.path1;Name=comp129678_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=292;mismatches=0;indels=0;unknowns=0;Target=comp129678_c0_seq1 292 1 .;CDS_Target=comp129678_c0_seq1 69 1 .;locus=RLOC_00019372
Chr2	stalkie_big_nohaplotig	exon	89823162	89823453	100	-	.	Parent=comp129678_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89823385	89823453	.	-	0	Parent=comp129678_c0_seq1.mrna1
Chr2	gffcl	locus	89823692	89954457	.	-	.	ID=RLOC_00019373;geneIDs=FBgn0031885.1.path2,comp163861_c0_seq1.path2;transcripts=comp163861_c0_seq1.mrna2,FBgn0031885.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	89823692	89832079	.	-	.	ID=comp163861_c0_seq1.mrna2;geneID=comp163861_c0_seq1.path2;Name=comp163861_c0_seq1;Dir=sensecoverage=38.6;identity=99.8;matches=3732;mismatches=6;indels=1;unknowns=0;locus=RLOC_00019373
Chr2	stalkie_big_nohaplotig	exon	89823692	89825163	99	-	.	Parent=comp163861_c0_seq1.mrna2;Target=comp163861_c0_seq1 8203 9675 +
Chr2	stalkie_big_nohaplotig	exon	89828497	89828762	100	-	.	Parent=comp163861_c0_seq1.mrna2;Target=comp163861_c0_seq1 7937 8202 +
Chr2	stalkie_big_nohaplotig	exon	89828850	89830224	100	-	.	Parent=comp163861_c0_seq1.mrna2;Target=comp163861_c0_seq1 6562 7936 +
Chr2	stalkie_big_nohaplotig	exon	89831455	89832079	100	-	.	Parent=comp163861_c0_seq1.mrna2;Target=comp163861_c0_seq1 5937 6561 +
Chr2	stalkie_big_nohaplotig	CDS	89824976	89825163	.	-	2	Parent=comp163861_c0_seq1.mrna2;Target=comp163861_c0_seq1 8203 8390 +
Chr2	stalkie_big_nohaplotig	CDS	89828497	89828762	.	-	1	Parent=comp163861_c0_seq1.mrna2;Target=comp163861_c0_seq1 7937 8202 +
Chr2	stalkie_big_nohaplotig	CDS	89828850	89830224	.	-	2	Parent=comp163861_c0_seq1.mrna2;Target=comp163861_c0_seq1 6562 7936 +
Chr2	stalkie_big_nohaplotig	CDS	89831455	89831836	.	-	0	Parent=comp163861_c0_seq1.mrna2;Target=comp163861_c0_seq1 6180 6561 +
Chr2	stalkie_big_nohaplotig	mRNA	89825106	89954457	.	-	.	ID=FBgn0031885.1.mrna2;geneID=FBgn0031885.1.path2;Name=FBgn0031885.1;Dir=sensecoverage=59.9;identity=97.3;matches=2309;mismatches=29;indels=36;unknowns=0;locus=RLOC_00019373
Chr2	stalkie_big_nohaplotig	exon	89825106	89825163	100	-	.	Parent=FBgn0031885.1.mrna2;Target=FBgn0031885.1 3891 3948 +
Chr2	stalkie_big_nohaplotig	exon	89828850	89829346	100	-	.	Parent=FBgn0031885.1.mrna2;Target=FBgn0031885.1 3394 3890 +
Chr2	stalkie_big_nohaplotig	exon	89829449	89830224	97	-	.	Parent=FBgn0031885.1.mrna2;Target=FBgn0031885.1 2600 3393 +
Chr2	stalkie_big_nohaplotig	exon	89831455	89832328	98	-	.	Parent=FBgn0031885.1.mrna2;Target=FBgn0031885.1 1724 2599 +
Chr2	stalkie_big_nohaplotig	exon	89841640	89841647	100	-	.	Parent=FBgn0031885.1.mrna2;Target=FBgn0031885.1 1716 1723 +
Chr2	stalkie_big_nohaplotig	exon	89849055	89849064	70	-	.	Parent=FBgn0031885.1.mrna2;Target=FBgn0031885.1 1706 1715 +
Chr2	stalkie_big_nohaplotig	exon	89851979	89851983	100	-	.	Parent=FBgn0031885.1.mrna2;Target=FBgn0031885.1 1701 1705 +
Chr2	stalkie_big_nohaplotig	exon	89865828	89865830	100	-	.	Parent=FBgn0031885.1.mrna2;Target=FBgn0031885.1 1698 1700 +
Chr2	stalkie_big_nohaplotig	exon	89873304	89873311	87	-	.	Parent=FBgn0031885.1.mrna2;Target=FBgn0031885.1 1690 1697 +
Chr2	stalkie_big_nohaplotig	exon	89884299	89884313	80	-	.	Parent=FBgn0031885.1.mrna2;Target=FBgn0031885.1 1676 1689 +
Chr2	stalkie_big_nohaplotig	exon	89889750	89889756	100	-	.	Parent=FBgn0031885.1.mrna2;Target=FBgn0031885.1 1669 1675 +
Chr2	stalkie_big_nohaplotig	exon	89891238	89891239	100	-	.	Parent=FBgn0031885.1.mrna2;Target=FBgn0031885.1 1667 1668 +
Chr2	stalkie_big_nohaplotig	exon	89898960	89898964	100	-	.	Parent=FBgn0031885.1.mrna2;Target=FBgn0031885.1 1662 1666 +
Chr2	stalkie_big_nohaplotig	exon	89904618	89904686	59	-	.	Parent=FBgn0031885.1.mrna2;Target=FBgn0031885.1 1596 1661 +
Chr2	stalkie_big_nohaplotig	exon	89916064	89916065	100	-	.	Parent=FBgn0031885.1.mrna2;Target=FBgn0031885.1 1594 1595 +
Chr2	stalkie_big_nohaplotig	exon	89921810	89921816	100	-	.	Parent=FBgn0031885.1.mrna2;Target=FBgn0031885.1 1587 1593 +
Chr2	stalkie_big_nohaplotig	exon	89954456	89954457	100	-	.	Parent=FBgn0031885.1.mrna2;Target=FBgn0031885.1 1585 1586 +
Chr2	stalkie_big_nohaplotig	CDS	89825106	89825163	.	-	1	Parent=FBgn0031885.1.mrna2;Target=FBgn0031885.1 3891 3948 +
Chr2	stalkie_big_nohaplotig	CDS	89828850	89829346	.	-	0	Parent=FBgn0031885.1.mrna2;Target=FBgn0031885.1 3394 3890 +
Chr2	stalkie_big_nohaplotig	CDS	89829449	89830224	.	-	2	Parent=FBgn0031885.1.mrna2;Target=FBgn0031885.1 2600 3393 +
Chr2	stalkie_big_nohaplotig	CDS	89831455	89831836	.	-	0	Parent=FBgn0031885.1.mrna2;Target=FBgn0031885.1 2218 2599 +
Chr2	gffcl	locus	89825834	89825997	.	-	.	ID=RLOC_00019374;geneIDs=comp147807_c0_seq1.path2;transcripts=comp147807_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	89825834	89825997	.	-	.	ID=comp147807_c0_seq1.mrna2;geneID=comp147807_c0_seq1.path2;Name=comp147807_c0_seq1;Dir=indeterminatecoverage=74.2;identity=93.3;matches=153;mismatches=11;indels=0;unknowns=0;Target=comp147807_c0_seq1 164 1 .;CDS_Target=comp147807_c0_seq1 162 112 .;locus=RLOC_00019374
Chr2	stalkie_big_nohaplotig	exon	89825834	89825997	93	-	.	Parent=comp147807_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	89825836	89825886	.	-	0	Parent=comp147807_c0_seq1.mrna2
Chr2	gffcl	locus	89826685	89827559	.	+	.	ID=RLOC_00019375;geneIDs=comp150233_c0_seq1.path1;transcripts=comp150233_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89826685	89827559	.	+	.	ID=comp150233_c0_seq1.mrna1;geneID=comp150233_c0_seq1.path1;Name=comp150233_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.1;matches=867;mismatches=8;indels=0;unknowns=0;Target=comp150233_c0_seq1 875 1 .;CDS_Target=comp150233_c0_seq1 227 144 .;locus=RLOC_00019375
Chr2	stalkie_big_nohaplotig	exon	89826685	89827559	99	+	.	Parent=comp150233_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89826828	89826911	.	+	0	Parent=comp150233_c0_seq1.mrna1
Chr2	gffcl	locus	89827629	89828372	.	+	.	ID=RLOC_00019376;geneIDs=comp151249_c0_seq1.path1;transcripts=comp151249_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89827629	89828372	.	+	.	ID=comp151249_c0_seq1.mrna1;geneID=comp151249_c0_seq1.path1;Name=comp151249_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.5;matches=740;mismatches=4;indels=0;unknowns=0;Target=comp151249_c0_seq1 744 1 .;CDS_Target=comp151249_c0_seq1 696 505 .;locus=RLOC_00019376
Chr2	stalkie_big_nohaplotig	exon	89827629	89828372	99	+	.	Parent=comp151249_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	89828133	89828324	.	+	0	Parent=comp151249_c0_seq1.mrna1
Chr2	gffcl	locus	89849397	89866915	.	-	.	ID=RLOC_00019377;geneIDs=FBgn0263346.1.path1;transcripts=FBgn0263346.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89849397	89866915	.	-	.	ID=FBgn0263346.1.mrna1;geneID=FBgn0263346.1.path1;Name=FBgn0263346.1;Dir=sensecoverage=100.0;identity=99.9;matches=1543;mismatches=1;indels=1;unknowns=0;locus=RLOC_00019377
Chr2	stalkie_big_nohaplotig	exon	89849397	89850199	99	-	.	Parent=FBgn0263346.1.mrna1;Target=FBgn0263346.1 742 1545 +
Chr2	stalkie_big_nohaplotig	exon	89855713	89855866	100	-	.	Parent=FBgn0263346.1.mrna1;Target=FBgn0263346.1 588 741 +
Chr2	stalkie_big_nohaplotig	exon	89855943	89856085	100	-	.	Parent=FBgn0263346.1.mrna1;Target=FBgn0263346.1 445 587 +
Chr2	stalkie_big_nohaplotig	exon	89862462	89862668	100	-	.	Parent=FBgn0263346.1.mrna1;Target=FBgn0263346.1 238 444 +
Chr2	stalkie_big_nohaplotig	exon	89866679	89866915	100	-	.	Parent=FBgn0263346.1.mrna1;Target=FBgn0263346.1 1 237 +
Chr2	stalkie_big_nohaplotig	CDS	89849397	89850199	.	-	0	Parent=FBgn0263346.1.mrna1;Target=FBgn0263346.1 742 1545 +
Chr2	stalkie_big_nohaplotig	CDS	89855713	89855866	.	-	1	Parent=FBgn0263346.1.mrna1;Target=FBgn0263346.1 588 741 +
Chr2	stalkie_big_nohaplotig	CDS	89855943	89856085	.	-	0	Parent=FBgn0263346.1.mrna1;Target=FBgn0263346.1 445 587 +
Chr2	stalkie_big_nohaplotig	CDS	89862462	89862668	.	-	0	Parent=FBgn0263346.1.mrna1;Target=FBgn0263346.1 238 444 +
Chr2	stalkie_big_nohaplotig	CDS	89866679	89866915	.	-	0	Parent=FBgn0263346.1.mrna1;Target=FBgn0263346.1 1 237 +
Chr2	gffcl	locus	89984478	89987448	.	-	.	ID=RLOC_00019378;geneIDs=FBgn0037338.1.path1;transcripts=FBgn0037338.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89984478	89987448	.	-	.	ID=FBgn0037338.1.mrna1;geneID=FBgn0037338.1.path1;Name=FBgn0037338.1;Dir=sensecoverage=100.0;identity=99.9;matches=1964;mismatches=0;indels=1;unknowns=0;locus=RLOC_00019378
Chr2	stalkie_big_nohaplotig	exon	89984478	89984695	99	-	.	Parent=FBgn0037338.1.mrna1;Target=FBgn0037338.1 1747 1965 +
Chr2	stalkie_big_nohaplotig	exon	89984760	89985210	100	-	.	Parent=FBgn0037338.1.mrna1;Target=FBgn0037338.1 1296 1746 +
Chr2	stalkie_big_nohaplotig	exon	89986084	89986195	100	-	.	Parent=FBgn0037338.1.mrna1;Target=FBgn0037338.1 1184 1295 +
Chr2	stalkie_big_nohaplotig	exon	89986266	89987448	100	-	.	Parent=FBgn0037338.1.mrna1;Target=FBgn0037338.1 1 1183 +
Chr2	stalkie_big_nohaplotig	CDS	89984478	89984695	.	-	0	Parent=FBgn0037338.1.mrna1;Target=FBgn0037338.1 1747 1965 +
Chr2	stalkie_big_nohaplotig	CDS	89984760	89985210	.	-	1	Parent=FBgn0037338.1.mrna1;Target=FBgn0037338.1 1296 1746 +
Chr2	stalkie_big_nohaplotig	CDS	89986084	89986195	.	-	2	Parent=FBgn0037338.1.mrna1;Target=FBgn0037338.1 1184 1295 +
Chr2	stalkie_big_nohaplotig	CDS	89986266	89987448	.	-	0	Parent=FBgn0037338.1.mrna1;Target=FBgn0037338.1 1 1183 +
Chr2	gffcl	locus	89989841	90010858	.	+	.	ID=RLOC_00019379;geneIDs=comp161116_c0_seq1.path2;transcripts=comp161116_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	89989841	90010858	.	+	.	ID=comp161116_c0_seq1.mrna2;geneID=comp161116_c0_seq1.path2;Name=comp161116_c0_seq1;Dir=indeterminatecoverage=3.7;identity=100.0;matches=170;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019379
Chr2	stalkie_big_nohaplotig	exon	89989841	89989842	100	+	.	Parent=comp161116_c0_seq1.mrna2;Target=comp161116_c0_seq1 4352 4351 .
Chr2	stalkie_big_nohaplotig	exon	89993969	89993970	100	+	.	Parent=comp161116_c0_seq1.mrna2;Target=comp161116_c0_seq1 4354 4353 .
Chr2	stalkie_big_nohaplotig	exon	90010693	90010858	100	+	.	Parent=comp161116_c0_seq1.mrna2;Target=comp161116_c0_seq1 4520 4355 .
Chr2	gffcl	locus	89998534	90016844	.	+	.	ID=RLOC_00019380;geneIDs=FBgn0037336.1.path1;transcripts=FBgn0037336.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	89998534	90016844	.	+	.	ID=FBgn0037336.1.mrna1;geneID=FBgn0037336.1.path1;Name=FBgn0037336.1;Dir=sensecoverage=100.0;identity=100.0;matches=3888;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019380
Chr2	stalkie_big_nohaplotig	exon	89998534	89998741	100	+	.	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 1 208 +
Chr2	stalkie_big_nohaplotig	exon	89998813	89999020	100	+	.	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 209 416 +
Chr2	stalkie_big_nohaplotig	exon	89999528	89999599	100	+	.	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 417 488 +
Chr2	stalkie_big_nohaplotig	exon	90003267	90003502	100	+	.	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 489 724 +
Chr2	stalkie_big_nohaplotig	exon	90003565	90003650	100	+	.	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 725 810 +
Chr2	stalkie_big_nohaplotig	exon	90003731	90004033	100	+	.	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 811 1113 +
Chr2	stalkie_big_nohaplotig	exon	90005969	90006875	100	+	.	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 1114 2020 +
Chr2	stalkie_big_nohaplotig	exon	90006945	90007304	100	+	.	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 2021 2380 +
Chr2	stalkie_big_nohaplotig	exon	90007367	90007824	100	+	.	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 2381 2838 +
Chr2	stalkie_big_nohaplotig	exon	90014693	90014791	100	+	.	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 2839 2937 +
Chr2	stalkie_big_nohaplotig	exon	90014854	90015164	100	+	.	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 2938 3248 +
Chr2	stalkie_big_nohaplotig	exon	90015221	90015497	100	+	.	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 3249 3525 +
Chr2	stalkie_big_nohaplotig	exon	90015565	90015726	100	+	.	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 3526 3687 +
Chr2	stalkie_big_nohaplotig	exon	90016644	90016844	100	+	.	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 3688 3888 +
Chr2	stalkie_big_nohaplotig	CDS	89998534	89998741	.	+	0	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 1 208 +
Chr2	stalkie_big_nohaplotig	CDS	89998813	89999020	.	+	2	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 209 416 +
Chr2	stalkie_big_nohaplotig	CDS	89999528	89999599	.	+	1	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 417 488 +
Chr2	stalkie_big_nohaplotig	CDS	90003267	90003502	.	+	1	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 489 724 +
Chr2	stalkie_big_nohaplotig	CDS	90003565	90003650	.	+	2	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 725 810 +
Chr2	stalkie_big_nohaplotig	CDS	90003731	90004033	.	+	0	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 811 1113 +
Chr2	stalkie_big_nohaplotig	CDS	90005969	90006875	.	+	0	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 1114 2020 +
Chr2	stalkie_big_nohaplotig	CDS	90006945	90007304	.	+	2	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 2021 2380 +
Chr2	stalkie_big_nohaplotig	CDS	90007367	90007824	.	+	2	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 2381 2838 +
Chr2	stalkie_big_nohaplotig	CDS	90014693	90014791	.	+	0	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 2839 2937 +
Chr2	stalkie_big_nohaplotig	CDS	90014854	90015164	.	+	0	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 2938 3248 +
Chr2	stalkie_big_nohaplotig	CDS	90015221	90015497	.	+	1	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 3249 3525 +
Chr2	stalkie_big_nohaplotig	CDS	90015565	90015726	.	+	0	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 3526 3687 +
Chr2	stalkie_big_nohaplotig	CDS	90016644	90016844	.	+	0	Parent=FBgn0037336.1.mrna1;Target=FBgn0037336.1 3688 3888 +
Chr2	gffcl	locus	90017633	90018321	.	+	.	ID=RLOC_00019381;geneIDs=comp112890_c0_seq1.path1;transcripts=comp112890_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90017633	90018321	.	+	.	ID=comp112890_c0_seq1.mrna1;geneID=comp112890_c0_seq1.path1;Name=comp112890_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=688;mismatches=1;indels=0;unknowns=0;Target=comp112890_c0_seq1 689 1 .;CDS_Target=comp112890_c0_seq1 609 526 .;locus=RLOC_00019381
Chr2	stalkie_big_nohaplotig	exon	90017633	90018321	99	+	.	Parent=comp112890_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	90018158	90018241	.	+	0	Parent=comp112890_c0_seq1.mrna1
Chr2	gffcl	locus	90018479	90019907	.	-	.	ID=RLOC_00019382;geneIDs=comp156387_c0_seq1.path1;transcripts=comp156387_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90018479	90019907	.	-	.	ID=comp156387_c0_seq1.mrna1;geneID=comp156387_c0_seq1.path1;Name=comp156387_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1426;mismatches=3;indels=0;unknowns=0;Target=comp156387_c0_seq1 1429 1 .;CDS_Target=comp156387_c0_seq1 976 836 .;locus=RLOC_00019382
Chr2	stalkie_big_nohaplotig	exon	90018479	90019907	99	-	.	Parent=comp156387_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	90018932	90019072	.	-	0	Parent=comp156387_c0_seq1.mrna1
Chr2	gffcl	locus	90021240	90023932	.	+	.	ID=RLOC_00019383;geneIDs=ORF2156.path1;transcripts=ORF2156.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90021240	90023932	.	+	.	ID=ORF2156.mrna1;geneID=ORF2156.path1;Name=ORF2156;Dir=sensecoverage=100.0;identity=100.0;matches=906;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019383
Chr2	stalkie_big_nohaplotig	exon	90021240	90021305	100	+	.	Parent=ORF2156.mrna1;Target=ORF2156 1 66 +
Chr2	stalkie_big_nohaplotig	exon	90021380	90021478	100	+	.	Parent=ORF2156.mrna1;Target=ORF2156 67 165 +
Chr2	stalkie_big_nohaplotig	exon	90021541	90021709	100	+	.	Parent=ORF2156.mrna1;Target=ORF2156 166 334 +
Chr2	stalkie_big_nohaplotig	exon	90023361	90023932	100	+	.	Parent=ORF2156.mrna1;Target=ORF2156 335 906 +
Chr2	stalkie_big_nohaplotig	CDS	90021240	90021305	.	+	0	Parent=ORF2156.mrna1;Target=ORF2156 1 66 +
Chr2	stalkie_big_nohaplotig	CDS	90021380	90021478	.	+	0	Parent=ORF2156.mrna1;Target=ORF2156 67 165 +
Chr2	stalkie_big_nohaplotig	CDS	90021541	90021709	.	+	0	Parent=ORF2156.mrna1;Target=ORF2156 166 334 +
Chr2	stalkie_big_nohaplotig	CDS	90023361	90023932	.	+	2	Parent=ORF2156.mrna1;Target=ORF2156 335 906 +
Chr2	gffcl	locus	90026325	90028499	.	+	.	ID=RLOC_00019384;geneIDs=ORF1072.path1;transcripts=ORF1072.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90026325	90028499	.	+	.	ID=ORF1072.mrna1;geneID=ORF1072.path1;Name=ORF1072;Dir=sensecoverage=100.0;identity=99.9;matches=1250;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019384
Chr2	stalkie_big_nohaplotig	exon	90026325	90026369	100	+	.	Parent=ORF1072.mrna1;Target=ORF1072 1 45 +
Chr2	stalkie_big_nohaplotig	exon	90026439	90026638	100	+	.	Parent=ORF1072.mrna1;Target=ORF1072 46 245 +
Chr2	stalkie_big_nohaplotig	exon	90027433	90027563	100	+	.	Parent=ORF1072.mrna1;Target=ORF1072 246 376 +
Chr2	stalkie_big_nohaplotig	exon	90027625	90028499	99	+	.	Parent=ORF1072.mrna1;Target=ORF1072 377 1251 +
Chr2	stalkie_big_nohaplotig	CDS	90026325	90026369	.	+	0	Parent=ORF1072.mrna1;Target=ORF1072 1 45 +
Chr2	stalkie_big_nohaplotig	CDS	90026439	90026638	.	+	0	Parent=ORF1072.mrna1;Target=ORF1072 46 245 +
Chr2	stalkie_big_nohaplotig	CDS	90027433	90027563	.	+	1	Parent=ORF1072.mrna1;Target=ORF1072 246 376 +
Chr2	stalkie_big_nohaplotig	CDS	90027625	90028499	.	+	2	Parent=ORF1072.mrna1;Target=ORF1072 377 1251 +
Chr2	gffcl	locus	90044622	90047239	.	+	.	ID=RLOC_00019386;geneIDs=ORF2372.path1;transcripts=ORF2372.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90044622	90047239	.	+	.	ID=ORF2372.mrna1;geneID=ORF2372.path1;Name=ORF2372;Dir=sensecoverage=100.0;identity=100.0;matches=870;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019386
Chr2	stalkie_big_nohaplotig	exon	90044622	90044750	100	+	.	Parent=ORF2372.mrna1;Target=ORF2372 1 129 +
Chr2	stalkie_big_nohaplotig	exon	90045981	90046079	100	+	.	Parent=ORF2372.mrna1;Target=ORF2372 130 228 +
Chr2	stalkie_big_nohaplotig	exon	90046379	90046547	100	+	.	Parent=ORF2372.mrna1;Target=ORF2372 229 397 +
Chr2	stalkie_big_nohaplotig	exon	90046696	90046857	100	+	.	Parent=ORF2372.mrna1;Target=ORF2372 398 559 +
Chr2	stalkie_big_nohaplotig	exon	90046929	90047239	100	+	.	Parent=ORF2372.mrna1;Target=ORF2372 560 870 +
Chr2	stalkie_big_nohaplotig	CDS	90044622	90044750	.	+	0	Parent=ORF2372.mrna1;Target=ORF2372 1 129 +
Chr2	stalkie_big_nohaplotig	CDS	90045981	90046079	.	+	0	Parent=ORF2372.mrna1;Target=ORF2372 130 228 +
Chr2	stalkie_big_nohaplotig	CDS	90046379	90046547	.	+	0	Parent=ORF2372.mrna1;Target=ORF2372 229 397 +
Chr2	stalkie_big_nohaplotig	CDS	90046696	90046857	.	+	2	Parent=ORF2372.mrna1;Target=ORF2372 398 559 +
Chr2	stalkie_big_nohaplotig	CDS	90046929	90047239	.	+	2	Parent=ORF2372.mrna1;Target=ORF2372 560 870 +
Chr2	gffcl	locus	90048370	90053558	.	+	.	ID=RLOC_00019387;geneIDs=ORF1173.path1;transcripts=ORF1173.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90048370	90053558	.	+	.	ID=ORF1173.mrna1;geneID=ORF1173.path1;Name=ORF1173;Dir=sensecoverage=100.0;identity=99.8;matches=1197;mismatches=3;indels=0;unknowns=0;locus=RLOC_00019387
Chr2	stalkie_big_nohaplotig	exon	90048370	90048759	99	+	.	Parent=ORF1173.mrna1;Target=ORF1173 1 390 +
Chr2	stalkie_big_nohaplotig	exon	90052502	90052588	100	+	.	Parent=ORF1173.mrna1;Target=ORF1173 391 477 +
Chr2	stalkie_big_nohaplotig	exon	90052645	90052813	100	+	.	Parent=ORF1173.mrna1;Target=ORF1173 478 646 +
Chr2	stalkie_big_nohaplotig	exon	90053005	90053558	99	+	.	Parent=ORF1173.mrna1;Target=ORF1173 647 1200 +
Chr2	stalkie_big_nohaplotig	CDS	90048370	90048759	.	+	0	Parent=ORF1173.mrna1;Target=ORF1173 1 390 +
Chr2	stalkie_big_nohaplotig	CDS	90052502	90052588	.	+	0	Parent=ORF1173.mrna1;Target=ORF1173 391 477 +
Chr2	stalkie_big_nohaplotig	CDS	90052645	90052813	.	+	0	Parent=ORF1173.mrna1;Target=ORF1173 478 646 +
Chr2	stalkie_big_nohaplotig	CDS	90053005	90053558	.	+	2	Parent=ORF1173.mrna1;Target=ORF1173 647 1200 +
Chr2	gffcl	locus	90053651	90055135	.	+	.	ID=RLOC_00019388;geneIDs=comp161620_c1_seq1.path1;transcripts=comp161620_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90053651	90055135	.	+	.	ID=comp161620_c1_seq1.mrna1;geneID=comp161620_c1_seq1.path1;Name=comp161620_c1_seq1;Dir=indeterminatecoverage=99.2;identity=99.5;matches=1483;mismatches=2;indels=5;unknowns=0;Target=comp161620_c1_seq1 1502 13 .;CDS_Target=comp161620_c1_seq1 1311 1150 .;locus=RLOC_00019388
Chr2	stalkie_big_nohaplotig	exon	90053651	90055135	99	+	.	Parent=comp161620_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	90054783	90054944	.	+	0	Parent=comp161620_c1_seq1.mrna1
Chr2	gffcl	locus	90063030	90070656	.	+	.	ID=RLOC_00019389;geneIDs=ORF340.path1,comp162568_c0_seq1.path1;transcripts=comp162568_c0_seq1.mrna1,ORF340.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90063030	90070656	.	+	.	ID=comp162568_c0_seq1.mrna1;geneID=comp162568_c0_seq1.path1;Name=comp162568_c0_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=4686;mismatches=6;indels=36;unknowns=0;locus=RLOC_00019389
Chr2	stalkie_big_nohaplotig	exon	90063030	90063227	100	+	.	Parent=comp162568_c0_seq1.mrna1;Target=comp162568_c0_seq1 4531 4728 -
Chr2	stalkie_big_nohaplotig	exon	90063288	90063427	98	+	.	Parent=comp162568_c0_seq1.mrna1;Target=comp162568_c0_seq1 4391 4530 -
Chr2	stalkie_big_nohaplotig	exon	90064268	90064359	100	+	.	Parent=comp162568_c0_seq1.mrna1;Target=comp162568_c0_seq1 4299 4390 -
Chr2	stalkie_big_nohaplotig	exon	90064415	90064583	100	+	.	Parent=comp162568_c0_seq1.mrna1;Target=comp162568_c0_seq1 4130 4298 -
Chr2	stalkie_big_nohaplotig	exon	90065019	90067933	98	+	.	Parent=comp162568_c0_seq1.mrna1;Target=comp162568_c0_seq1 1179 4129 -
Chr2	stalkie_big_nohaplotig	exon	90069216	90069308	100	+	.	Parent=comp162568_c0_seq1.mrna1;Target=comp162568_c0_seq1 1086 1178 -
Chr2	stalkie_big_nohaplotig	exon	90069366	90069534	100	+	.	Parent=comp162568_c0_seq1.mrna1;Target=comp162568_c0_seq1 917 1085 -
Chr2	stalkie_big_nohaplotig	exon	90069741	90070656	100	+	.	Parent=comp162568_c0_seq1.mrna1;Target=comp162568_c0_seq1 1 916 -
Chr2	stalkie_big_nohaplotig	CDS	90066803	90067933	.	+	0	Parent=comp162568_c0_seq1.mrna1;Target=comp162568_c0_seq1 1179 2345 .
Chr2	stalkie_big_nohaplotig	CDS	90069216	90069308	.	+	0	Parent=comp162568_c0_seq1.mrna1;Target=comp162568_c0_seq1 1086 1178 .
Chr2	stalkie_big_nohaplotig	CDS	90069366	90069534	.	+	0	Parent=comp162568_c0_seq1.mrna1;Target=comp162568_c0_seq1 917 1085 .
Chr2	stalkie_big_nohaplotig	CDS	90069741	90070285	.	+	2	Parent=comp162568_c0_seq1.mrna1;Target=comp162568_c0_seq1 372 916 .
Chr2	stalkie_big_nohaplotig	mRNA	90066788	90070282	.	+	.	ID=ORF340.mrna1;geneID=ORF340.path1;Name=ORF340;Dir=sensecoverage=100.0;identity=99.6;matches=1938;mismatches=3;indels=5;unknowns=0;locus=RLOC_00019389
Chr2	stalkie_big_nohaplotig	exon	90066788	90067435	99	+	.	Parent=ORF340.mrna1;Target=ORF340 1 648 +
Chr2	stalkie_big_nohaplotig	exon	90067445	90067933	98	+	.	Parent=ORF340.mrna1;Target=ORF340 689 1182 +
Chr2	stalkie_big_nohaplotig	exon	90069216	90069308	100	+	.	Parent=ORF340.mrna1;Target=ORF340 1183 1275 +
Chr2	stalkie_big_nohaplotig	exon	90069366	90069534	100	+	.	Parent=ORF340.mrna1;Target=ORF340 1276 1444 +
Chr2	stalkie_big_nohaplotig	exon	90069741	90070282	100	+	.	Parent=ORF340.mrna1;Target=ORF340 1445 1986 +
Chr2	stalkie_big_nohaplotig	CDS	90066788	90067435	.	+	0	Parent=ORF340.mrna1;Target=ORF340 1 648 +
Chr2	stalkie_big_nohaplotig	CDS	90067445	90067933	.	+	0	Parent=ORF340.mrna1;Target=ORF340 689 1182 +
Chr2	stalkie_big_nohaplotig	CDS	90069216	90069308	.	+	0	Parent=ORF340.mrna1;Target=ORF340 1183 1275 +
Chr2	stalkie_big_nohaplotig	CDS	90069366	90069534	.	+	0	Parent=ORF340.mrna1;Target=ORF340 1276 1444 +
Chr2	stalkie_big_nohaplotig	CDS	90069741	90070282	.	+	2	Parent=ORF340.mrna1;Target=ORF340 1445 1986 +
Chr2	stalkie_big_nohaplotig	mRNA	90066629	90194384	.	-	.	ID=comp158533_c0_seq1.mrna1;geneID=comp158533_c0_seq1.path1;Name=comp158533_c0_seq1;Dir=antisensecoverage=79.4;identity=92.2;matches=1456;mismatches=36;indels=87;unknowns=0;Target=comp158533_c0_seq1 1031 1633 .;locus=RLOC_00019390
Chr2	stalkie_big_nohaplotig	exon	90066629	90066637	100	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 402 410 -
Chr2	stalkie_big_nohaplotig	exon	90068272	90068278	100	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 411 417 -
Chr2	stalkie_big_nohaplotig	exon	90076169	90076187	44	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 418 451 -
Chr2	stalkie_big_nohaplotig	exon	90079648	90079658	100	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 452 462 -
Chr2	stalkie_big_nohaplotig	exon	90087183	90087209	54	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 463 497 -
Chr2	stalkie_big_nohaplotig	exon	90091123	90091128	100	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 498 503 -
Chr2	stalkie_big_nohaplotig	exon	90091228	90091239	91	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 542 553 -
Chr2	stalkie_big_nohaplotig	exon	90098290	90098297	87	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 554 561 -
Chr2	stalkie_big_nohaplotig	exon	90104572	90104577	100	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 562 567 -
Chr2	stalkie_big_nohaplotig	exon	90112081	90112087	100	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 568 574 -
Chr2	stalkie_big_nohaplotig	exon	90116342	90116345	100	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 575 578 -
Chr2	stalkie_big_nohaplotig	exon	90124344	90124348	80	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 579 583 -
Chr2	stalkie_big_nohaplotig	exon	90128563	90128573	100	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 584 594 -
Chr2	stalkie_big_nohaplotig	exon	90133992	90134000	66	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 595 603 -
Chr2	stalkie_big_nohaplotig	exon	90137959	90137965	100	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 604 610 -
Chr2	stalkie_big_nohaplotig	exon	90143105	90143108	100	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 611 614 -
Chr2	stalkie_big_nohaplotig	exon	90143771	90143775	100	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 615 619 -
Chr2	stalkie_big_nohaplotig	exon	90149436	90149450	80	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 620 634 -
Chr2	stalkie_big_nohaplotig	exon	90150049	90150054	100	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 635 640 -
Chr2	stalkie_big_nohaplotig	exon	90152463	90152474	83	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 641 650 -
Chr2	stalkie_big_nohaplotig	exon	90156165	90156205	44	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 651 704 -
Chr2	stalkie_big_nohaplotig	exon	90170106	90170123	85	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 705 724 -
Chr2	stalkie_big_nohaplotig	exon	90171062	90171067	100	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 725 730 -
Chr2	stalkie_big_nohaplotig	exon	90177520	90177528	100	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 731 739 -
Chr2	stalkie_big_nohaplotig	exon	90181343	90181345	100	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 740 742 -
Chr2	stalkie_big_nohaplotig	exon	90185617	90185621	100	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 743 747 -
Chr2	stalkie_big_nohaplotig	exon	90191121	90191292	100	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 748 919 -
Chr2	stalkie_big_nohaplotig	exon	90191348	90192142	94	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 920 1673 -
Chr2	stalkie_big_nohaplotig	exon	90192686	90192750	100	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 1674 1738 -
Chr2	stalkie_big_nohaplotig	exon	90192811	90192889	100	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 1739 1817 -
Chr2	stalkie_big_nohaplotig	exon	90194231	90194384	100	-	.	Parent=comp158533_c0_seq1.mrna1;Target=comp158533_c0_seq1 1818 1971 -
Chr2	stalkie_big_nohaplotig	CDS	90191459	90192102	.	-	0	Parent=comp158533_c0_seq1.mrna1
Chr2	gffcl	locus	90077283	90096962	.	+	.	ID=RLOC_00019391;geneIDs=FBgn0038419.1.path1;transcripts=FBgn0038419.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90077283	90096962	.	+	.	ID=FBgn0038419.1.mrna1;geneID=FBgn0038419.1.path1;Name=FBgn0038419.1;Dir=sensecoverage=100.0;identity=100.0;matches=438;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019391
Chr2	stalkie_big_nohaplotig	exon	90077283	90077380	100	+	.	Parent=FBgn0038419.1.mrna1;Target=FBgn0038419.1 1 98 +
Chr2	stalkie_big_nohaplotig	exon	90096524	90096678	100	+	.	Parent=FBgn0038419.1.mrna1;Target=FBgn0038419.1 99 253 +
Chr2	stalkie_big_nohaplotig	exon	90096778	90096962	100	+	.	Parent=FBgn0038419.1.mrna1;Target=FBgn0038419.1 254 438 +
Chr2	stalkie_big_nohaplotig	CDS	90077283	90077380	.	+	0	Parent=FBgn0038419.1.mrna1;Target=FBgn0038419.1 1 98 +
Chr2	stalkie_big_nohaplotig	CDS	90096524	90096678	.	+	1	Parent=FBgn0038419.1.mrna1;Target=FBgn0038419.1 99 253 +
Chr2	stalkie_big_nohaplotig	CDS	90096778	90096962	.	+	2	Parent=FBgn0038419.1.mrna1;Target=FBgn0038419.1 254 438 +
Chr2	gffcl	locus	90115875	90117904	.	+	.	ID=RLOC_00019392;geneIDs=FBgn0010750.1.path1;transcripts=FBgn0010750.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90115875	90117904	.	+	.	ID=FBgn0010750.1.mrna1;geneID=FBgn0010750.1.path1;Name=FBgn0010750.1;Dir=sensecoverage=100.0;identity=100.0;matches=1794;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019392
Chr2	stalkie_big_nohaplotig	exon	90115875	90115957	100	+	.	Parent=FBgn0010750.1.mrna1;Target=FBgn0010750.1 1 83 +
Chr2	stalkie_big_nohaplotig	exon	90116011	90116977	100	+	.	Parent=FBgn0010750.1.mrna1;Target=FBgn0010750.1 84 1050 +
Chr2	stalkie_big_nohaplotig	exon	90117161	90117904	100	+	.	Parent=FBgn0010750.1.mrna1;Target=FBgn0010750.1 1051 1794 +
Chr2	stalkie_big_nohaplotig	CDS	90115875	90115957	.	+	0	Parent=FBgn0010750.1.mrna1;Target=FBgn0010750.1 1 83 +
Chr2	stalkie_big_nohaplotig	CDS	90116011	90116977	.	+	1	Parent=FBgn0010750.1.mrna1;Target=FBgn0010750.1 84 1050 +
Chr2	stalkie_big_nohaplotig	CDS	90117161	90117904	.	+	0	Parent=FBgn0010750.1.mrna1;Target=FBgn0010750.1 1051 1794 +
Chr2	gffcl	locus	90118051	90125705	.	-	.	ID=RLOC_00019393;geneIDs=FBgn0037276.1.path1;transcripts=FBgn0037276.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90118051	90125705	.	-	.	ID=FBgn0037276.1.mrna1;geneID=FBgn0037276.1.path1;Name=FBgn0037276.1;Dir=sensecoverage=100.0;identity=99.8;matches=2840;mismatches=7;indels=0;unknowns=0;locus=RLOC_00019393
Chr2	stalkie_big_nohaplotig	exon	90118051	90118154	100	-	.	Parent=FBgn0037276.1.mrna1;Target=FBgn0037276.1 2744 2847 +
Chr2	stalkie_big_nohaplotig	exon	90118217	90118575	100	-	.	Parent=FBgn0037276.1.mrna1;Target=FBgn0037276.1 2385 2743 +
Chr2	stalkie_big_nohaplotig	exon	90119786	90119951	100	-	.	Parent=FBgn0037276.1.mrna1;Target=FBgn0037276.1 2219 2384 +
Chr2	stalkie_big_nohaplotig	exon	90120006	90120582	100	-	.	Parent=FBgn0037276.1.mrna1;Target=FBgn0037276.1 1642 2218 +
Chr2	stalkie_big_nohaplotig	exon	90120642	90120869	100	-	.	Parent=FBgn0037276.1.mrna1;Target=FBgn0037276.1 1414 1641 +
Chr2	stalkie_big_nohaplotig	exon	90122624	90122725	100	-	.	Parent=FBgn0037276.1.mrna1;Target=FBgn0037276.1 1312 1413 +
Chr2	stalkie_big_nohaplotig	exon	90122788	90123117	100	-	.	Parent=FBgn0037276.1.mrna1;Target=FBgn0037276.1 982 1311 +
Chr2	stalkie_big_nohaplotig	exon	90123396	90123967	98	-	.	Parent=FBgn0037276.1.mrna1;Target=FBgn0037276.1 410 981 +
Chr2	stalkie_big_nohaplotig	exon	90124099	90124246	99	-	.	Parent=FBgn0037276.1.mrna1;Target=FBgn0037276.1 262 409 +
Chr2	stalkie_big_nohaplotig	exon	90125445	90125705	100	-	.	Parent=FBgn0037276.1.mrna1;Target=FBgn0037276.1 1 261 +
Chr2	stalkie_big_nohaplotig	CDS	90118051	90118154	.	-	2	Parent=FBgn0037276.1.mrna1;Target=FBgn0037276.1 2744 2847 +
Chr2	stalkie_big_nohaplotig	CDS	90118217	90118575	.	-	1	Parent=FBgn0037276.1.mrna1;Target=FBgn0037276.1 2385 2743 +
Chr2	stalkie_big_nohaplotig	CDS	90119786	90119951	.	-	2	Parent=FBgn0037276.1.mrna1;Target=FBgn0037276.1 2219 2384 +
Chr2	stalkie_big_nohaplotig	CDS	90120006	90120582	.	-	0	Parent=FBgn0037276.1.mrna1;Target=FBgn0037276.1 1642 2218 +
Chr2	stalkie_big_nohaplotig	CDS	90120642	90120869	.	-	0	Parent=FBgn0037276.1.mrna1;Target=FBgn0037276.1 1414 1641 +
Chr2	stalkie_big_nohaplotig	CDS	90122624	90122725	.	-	0	Parent=FBgn0037276.1.mrna1;Target=FBgn0037276.1 1312 1413 +
Chr2	stalkie_big_nohaplotig	CDS	90122788	90123117	.	-	0	Parent=FBgn0037276.1.mrna1;Target=FBgn0037276.1 982 1311 +
Chr2	stalkie_big_nohaplotig	CDS	90123396	90123967	.	-	2	Parent=FBgn0037276.1.mrna1;Target=FBgn0037276.1 410 981 +
Chr2	stalkie_big_nohaplotig	CDS	90124099	90124246	.	-	0	Parent=FBgn0037276.1.mrna1;Target=FBgn0037276.1 262 409 +
Chr2	stalkie_big_nohaplotig	CDS	90125445	90125705	.	-	0	Parent=FBgn0037276.1.mrna1;Target=FBgn0037276.1 1 261 +
Chr2	gffcl	locus	90128836	90132575	.	-	.	ID=RLOC_00019394;geneIDs=FBgn0037275.1.path1;transcripts=FBgn0037275.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90128836	90132575	.	-	.	ID=FBgn0037275.1.mrna1;geneID=FBgn0037275.1.path1;Name=FBgn0037275.1;Dir=sensecoverage=100.0;identity=99.9;matches=1948;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019394
Chr2	stalkie_big_nohaplotig	exon	90128836	90129449	100	-	.	Parent=FBgn0037275.1.mrna1;Target=FBgn0037275.1 1337 1950 +
Chr2	stalkie_big_nohaplotig	exon	90129518	90129715	98	-	.	Parent=FBgn0037275.1.mrna1;Target=FBgn0037275.1 1139 1336 +
Chr2	stalkie_big_nohaplotig	exon	90131438	90132575	100	-	.	Parent=FBgn0037275.1.mrna1;Target=FBgn0037275.1 1 1138 +
Chr2	stalkie_big_nohaplotig	CDS	90128836	90129449	.	-	2	Parent=FBgn0037275.1.mrna1;Target=FBgn0037275.1 1337 1950 +
Chr2	stalkie_big_nohaplotig	CDS	90129518	90129715	.	-	2	Parent=FBgn0037275.1.mrna1;Target=FBgn0037275.1 1139 1336 +
Chr2	stalkie_big_nohaplotig	CDS	90131438	90132575	.	-	0	Parent=FBgn0037275.1.mrna1;Target=FBgn0037275.1 1 1138 +
Chr2	gffcl	locus	90138103	90148332	.	-	.	ID=RLOC_00019395;geneIDs=FBgn0260794.1.path1;transcripts=FBgn0260794.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90138103	90148332	.	-	.	ID=FBgn0260794.1.mrna1;geneID=FBgn0260794.1.path1;Name=FBgn0260794.1;Dir=sensecoverage=99.9;identity=99.9;matches=5922;mismatches=3;indels=0;unknowns=0;locus=RLOC_00019395
Chr2	stalkie_big_nohaplotig	exon	90138103	90138557	100	-	.	Parent=FBgn0260794.1.mrna1;Target=FBgn0260794.1 5474 5928 +
Chr2	stalkie_big_nohaplotig	exon	90138625	90138826	100	-	.	Parent=FBgn0260794.1.mrna1;Target=FBgn0260794.1 5272 5473 +
Chr2	stalkie_big_nohaplotig	exon	90138887	90139075	100	-	.	Parent=FBgn0260794.1.mrna1;Target=FBgn0260794.1 5083 5271 +
Chr2	stalkie_big_nohaplotig	exon	90140985	90141674	100	-	.	Parent=FBgn0260794.1.mrna1;Target=FBgn0260794.1 4393 5082 +
Chr2	stalkie_big_nohaplotig	exon	90141749	90142554	100	-	.	Parent=FBgn0260794.1.mrna1;Target=FBgn0260794.1 3587 4392 +
Chr2	stalkie_big_nohaplotig	exon	90142617	90142956	100	-	.	Parent=FBgn0260794.1.mrna1;Target=FBgn0260794.1 3247 3586 +
Chr2	stalkie_big_nohaplotig	exon	90145015	90145910	100	-	.	Parent=FBgn0260794.1.mrna1;Target=FBgn0260794.1 2351 3246 +
Chr2	stalkie_big_nohaplotig	exon	90145986	90148332	99	-	.	Parent=FBgn0260794.1.mrna1;Target=FBgn0260794.1 4 2350 +
Chr2	stalkie_big_nohaplotig	CDS	90138103	90138557	.	-	2	Parent=FBgn0260794.1.mrna1;Target=FBgn0260794.1 5474 5928 +
Chr2	stalkie_big_nohaplotig	CDS	90138625	90138826	.	-	0	Parent=FBgn0260794.1.mrna1;Target=FBgn0260794.1 5272 5473 +
Chr2	stalkie_big_nohaplotig	CDS	90138887	90139075	.	-	0	Parent=FBgn0260794.1.mrna1;Target=FBgn0260794.1 5083 5271 +
Chr2	stalkie_big_nohaplotig	CDS	90140985	90141674	.	-	0	Parent=FBgn0260794.1.mrna1;Target=FBgn0260794.1 4393 5082 +
Chr2	stalkie_big_nohaplotig	CDS	90141749	90142554	.	-	2	Parent=FBgn0260794.1.mrna1;Target=FBgn0260794.1 3587 4392 +
Chr2	stalkie_big_nohaplotig	CDS	90142617	90142956	.	-	0	Parent=FBgn0260794.1.mrna1;Target=FBgn0260794.1 3247 3586 +
Chr2	stalkie_big_nohaplotig	CDS	90145015	90145910	.	-	2	Parent=FBgn0260794.1.mrna1;Target=FBgn0260794.1 2351 3246 +
Chr2	stalkie_big_nohaplotig	CDS	90145986	90148332	.	-	0	Parent=FBgn0260794.1.mrna1;Target=FBgn0260794.1 4 2350 +
Chr2	gffcl	locus	90173258	90174157	.	-	.	ID=RLOC_00019396;geneIDs=FBgn0026417.1.path1;transcripts=FBgn0026417.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90173258	90174157	.	-	.	ID=FBgn0026417.1.mrna1;geneID=FBgn0026417.1.path1;Name=FBgn0026417.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=900;mismatches=0;indels=0;unknowns=0;Target=FBgn0026417.1 900 1 .;locus=RLOC_00019396
Chr2	stalkie_big_nohaplotig	exon	90173258	90174157	100	-	.	Parent=FBgn0026417.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	90173258	90174157	.	-	0	Parent=FBgn0026417.1.mrna1
Chr2	gffcl	locus	90182470	90184953	.	+	.	ID=RLOC_00019397;geneIDs=FBgn0037279.1.path1;transcripts=FBgn0037279.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90182470	90184953	.	+	.	ID=FBgn0037279.1.mrna1;geneID=FBgn0037279.1.path1;Name=FBgn0037279.1;Dir=sensecoverage=100.0;identity=100.0;matches=1122;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019397
Chr2	stalkie_big_nohaplotig	exon	90182470	90182658	100	+	.	Parent=FBgn0037279.1.mrna1;Target=FBgn0037279.1 1 189 +
Chr2	stalkie_big_nohaplotig	exon	90182717	90183251	100	+	.	Parent=FBgn0037279.1.mrna1;Target=FBgn0037279.1 190 724 +
Chr2	stalkie_big_nohaplotig	exon	90184556	90184953	100	+	.	Parent=FBgn0037279.1.mrna1;Target=FBgn0037279.1 725 1122 +
Chr2	stalkie_big_nohaplotig	CDS	90182470	90182658	.	+	0	Parent=FBgn0037279.1.mrna1;Target=FBgn0037279.1 1 189 +
Chr2	stalkie_big_nohaplotig	CDS	90182717	90183251	.	+	0	Parent=FBgn0037279.1.mrna1;Target=FBgn0037279.1 190 724 +
Chr2	stalkie_big_nohaplotig	CDS	90184556	90184953	.	+	2	Parent=FBgn0037279.1.mrna1;Target=FBgn0037279.1 725 1122 +
Chr2	gffcl	locus	90185241	90185582	.	-	.	ID=RLOC_00019398;geneIDs=comp689587_c0_seq1.path1;transcripts=comp689587_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90185241	90185582	.	-	.	ID=comp689587_c0_seq1.mrna1;geneID=comp689587_c0_seq1.path1;Name=comp689587_c0_seq1;Dir=indeterminatecoverage=96.1;identity=99.7;matches=341;mismatches=1;indels=0;unknowns=0;Target=comp689587_c0_seq1 346 5 .;CDS_Target=comp689587_c0_seq1 189 118 .;locus=RLOC_00019398
Chr2	stalkie_big_nohaplotig	exon	90185241	90185582	99	-	.	Parent=comp689587_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	90185398	90185469	.	-	0	Parent=comp689587_c0_seq1.mrna1
Chr2	gffcl	locus	90186649	90189602	.	+	.	ID=RLOC_00019399;geneIDs=FBgn0037280.1.path1;transcripts=FBgn0037280.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90186649	90189602	.	+	.	ID=FBgn0037280.1.mrna1;geneID=FBgn0037280.1.path1;Name=FBgn0037280.1;Dir=sensecoverage=100.0;identity=100.0;matches=1110;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019399
Chr2	stalkie_big_nohaplotig	exon	90186649	90186722	100	+	.	Parent=FBgn0037280.1.mrna1;Target=FBgn0037280.1 1 74 +
Chr2	stalkie_big_nohaplotig	exon	90186819	90186967	100	+	.	Parent=FBgn0037280.1.mrna1;Target=FBgn0037280.1 75 223 +
Chr2	stalkie_big_nohaplotig	exon	90188537	90188726	100	+	.	Parent=FBgn0037280.1.mrna1;Target=FBgn0037280.1 224 413 +
Chr2	stalkie_big_nohaplotig	exon	90188837	90189074	100	+	.	Parent=FBgn0037280.1.mrna1;Target=FBgn0037280.1 414 651 +
Chr2	stalkie_big_nohaplotig	exon	90189144	90189602	100	+	.	Parent=FBgn0037280.1.mrna1;Target=FBgn0037280.1 652 1110 +
Chr2	stalkie_big_nohaplotig	CDS	90186649	90186722	.	+	0	Parent=FBgn0037280.1.mrna1;Target=FBgn0037280.1 1 74 +
Chr2	stalkie_big_nohaplotig	CDS	90186819	90186967	.	+	1	Parent=FBgn0037280.1.mrna1;Target=FBgn0037280.1 75 223 +
Chr2	stalkie_big_nohaplotig	CDS	90188537	90188726	.	+	2	Parent=FBgn0037280.1.mrna1;Target=FBgn0037280.1 224 413 +
Chr2	stalkie_big_nohaplotig	CDS	90188837	90189074	.	+	1	Parent=FBgn0037280.1.mrna1;Target=FBgn0037280.1 414 651 +
Chr2	stalkie_big_nohaplotig	CDS	90189144	90189602	.	+	0	Parent=FBgn0037280.1.mrna1;Target=FBgn0037280.1 652 1110 +
Chr2	gffcl	locus	90202394	90203179	.	-	.	ID=RLOC_00019400;geneIDs=comp152193_c0_seq1.path1;transcripts=comp152193_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90202394	90203179	.	-	.	ID=comp152193_c0_seq1.mrna1;geneID=comp152193_c0_seq1.path1;Name=comp152193_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=780;mismatches=6;indels=2;unknowns=0;Target=comp152193_c0_seq1 788 1 .;CDS_Target=comp152193_c0_seq1 141 1 .;locus=RLOC_00019400
Chr2	stalkie_big_nohaplotig	exon	90202394	90203179	98	-	.	Parent=comp152193_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	90203039	90203179	.	-	0	Parent=comp152193_c0_seq1.mrna1
Chr2	gffcl	locus	90207509	90208394	.	+	.	ID=RLOC_00019401;geneIDs=comp149289_c0_seq1.path1;transcripts=comp149289_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90207509	90208394	.	+	.	ID=comp149289_c0_seq1.mrna1;geneID=comp149289_c0_seq1.path1;Name=comp149289_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=886;mismatches=0;indels=0;unknowns=0;Target=comp149289_c0_seq1 887 2 .;CDS_Target=comp149289_c0_seq1 861 718 .;locus=RLOC_00019401
Chr2	stalkie_big_nohaplotig	exon	90207509	90208394	100	+	.	Parent=comp149289_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	90208225	90208368	.	+	0	Parent=comp149289_c0_seq1.mrna1
Chr2	gffcl	locus	90245307	90250998	.	+	.	ID=RLOC_00019403;geneIDs=Dv_FBgn0208060.1.path1,comp143991_c1_seq1.path1;transcripts=Dv_FBgn0208060.1.mrna1,comp143991_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90245307	90247688	.	+	.	ID=Dv_FBgn0208060.1.mrna1;geneID=Dv_FBgn0208060.1.path1;Name=Dv_FBgn0208060.1;Dir=sensecoverage=100.0;identity=99.7;matches=948;mismatches=1;indels=2;unknowns=0;locus=RLOC_00019403
Chr2	stalkie_big_nohaplotig	exon	90245307	90245494	98	+	.	Parent=Dv_FBgn0208060.1.mrna1;Target=Dv_FBgn0208060.1 1 190 +
Chr2	stalkie_big_nohaplotig	exon	90246784	90246956	100	+	.	Parent=Dv_FBgn0208060.1.mrna1;Target=Dv_FBgn0208060.1 191 363 +
Chr2	stalkie_big_nohaplotig	exon	90247037	90247209	100	+	.	Parent=Dv_FBgn0208060.1.mrna1;Target=Dv_FBgn0208060.1 364 536 +
Chr2	stalkie_big_nohaplotig	exon	90247274	90247688	99	+	.	Parent=Dv_FBgn0208060.1.mrna1;Target=Dv_FBgn0208060.1 537 951 +
Chr2	stalkie_big_nohaplotig	CDS	90245446	90245494	.	+	0	Parent=Dv_FBgn0208060.1.mrna1;Target=Dv_FBgn0208060.1 142 190 +
Chr2	stalkie_big_nohaplotig	CDS	90246784	90246956	.	+	2	Parent=Dv_FBgn0208060.1.mrna1;Target=Dv_FBgn0208060.1 191 363 +
Chr2	stalkie_big_nohaplotig	CDS	90247037	90247209	.	+	0	Parent=Dv_FBgn0208060.1.mrna1;Target=Dv_FBgn0208060.1 364 536 +
Chr2	stalkie_big_nohaplotig	CDS	90247274	90247688	.	+	1	Parent=Dv_FBgn0208060.1.mrna1;Target=Dv_FBgn0208060.1 537 951 +
Chr2	stalkie_big_nohaplotig	mRNA	90245476	90250998	.	+	.	ID=comp143991_c1_seq1.mrna1;geneID=comp143991_c1_seq1.path1;Name=comp143991_c1_seq1;Dir=sensecoverage=99.8;identity=98.5;matches=447;mismatches=7;indels=0;unknowns=0;Target=comp143991_c1_seq1 255 392 +;locus=RLOC_00019403
Chr2	stalkie_big_nohaplotig	exon	90245476	90245494	100	+	.	Parent=comp143991_c1_seq1.mrna1;Target=comp143991_c1_seq1 1 19 +
Chr2	stalkie_big_nohaplotig	exon	90250564	90250998	98	+	.	Parent=comp143991_c1_seq1.mrna1;Target=comp143991_c1_seq1 20 454 +
Chr2	stalkie_big_nohaplotig	CDS	90250799	90250936	.	+	0	Parent=comp143991_c1_seq1.mrna1
Chr2	gffcl	locus	90307521	90309026	.	-	.	ID=RLOC_00019404;geneIDs=ORF840.path1;transcripts=ORF840.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90307521	90309026	.	-	.	ID=ORF840.mrna1;geneID=ORF840.path1;Name=ORF840;Dir=sensecoverage=100.0;identity=99.8;matches=1395;mismatches=3;indels=0;unknowns=0;locus=RLOC_00019404
Chr2	stalkie_big_nohaplotig	exon	90307521	90308482	99	-	.	Parent=ORF840.mrna1;Target=ORF840 437 1398 +
Chr2	stalkie_big_nohaplotig	exon	90308537	90308785	100	-	.	Parent=ORF840.mrna1;Target=ORF840 188 436 +
Chr2	stalkie_big_nohaplotig	exon	90308840	90309026	100	-	.	Parent=ORF840.mrna1;Target=ORF840 1 187 +
Chr2	stalkie_big_nohaplotig	CDS	90307521	90308482	.	-	2	Parent=ORF840.mrna1;Target=ORF840 437 1398 +
Chr2	stalkie_big_nohaplotig	CDS	90308537	90308785	.	-	2	Parent=ORF840.mrna1;Target=ORF840 188 436 +
Chr2	stalkie_big_nohaplotig	CDS	90308840	90309026	.	-	0	Parent=ORF840.mrna1;Target=ORF840 1 187 +
Chr2	stalkie_big_nohaplotig	mRNA	90399603	90400487	.	-	.	ID=comp160714_c3_seq1.mrna1;geneID=comp160714_c3_seq1.path1;Name=comp160714_c3_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=872;mismatches=12;indels=1;unknowns=0;Target=comp160714_c3_seq1 884 1 .;CDS_Target=comp160714_c3_seq1 598 527 .;locus=RLOC_00019407
Chr2	stalkie_big_nohaplotig	exon	90399603	90400487	98	-	.	Parent=comp160714_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	90399890	90399961	.	-	0	Parent=comp160714_c3_seq1.mrna1
Chr2	gffcl	locus	90413658	90415013	.	+	.	ID=RLOC_00019408;geneIDs=FBgn0031321.1.path1;transcripts=FBgn0031321.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90413658	90415013	.	+	.	ID=FBgn0031321.1.mrna1;geneID=FBgn0031321.1.path1;Name=FBgn0031321.1;Dir=sensecoverage=100.0;identity=100.0;matches=1296;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019408
Chr2	stalkie_big_nohaplotig	exon	90413658	90413873	100	+	.	Parent=FBgn0031321.1.mrna1;Target=FBgn0031321.1 1 216 +
Chr2	stalkie_big_nohaplotig	exon	90413934	90415013	100	+	.	Parent=FBgn0031321.1.mrna1;Target=FBgn0031321.1 217 1296 +
Chr2	stalkie_big_nohaplotig	CDS	90413658	90413873	.	+	0	Parent=FBgn0031321.1.mrna1;Target=FBgn0031321.1 1 216 +
Chr2	stalkie_big_nohaplotig	CDS	90413934	90415013	.	+	0	Parent=FBgn0031321.1.mrna1;Target=FBgn0031321.1 217 1296 +
Chr2	gffcl	locus	90417095	90422297	.	-	.	ID=RLOC_00019409;geneIDs=FBgn0004913.1.path1;transcripts=FBgn0004913.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90417095	90422297	.	-	.	ID=FBgn0004913.1.mrna1;geneID=FBgn0004913.1.path1;Name=FBgn0004913.1;Dir=sensecoverage=100.0;identity=100.0;matches=3294;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019409
Chr2	stalkie_big_nohaplotig	exon	90417095	90417211	100	-	.	Parent=FBgn0004913.1.mrna1;Target=FBgn0004913.1 3178 3294 +
Chr2	stalkie_big_nohaplotig	exon	90417648	90418311	100	-	.	Parent=FBgn0004913.1.mrna1;Target=FBgn0004913.1 2514 3177 +
Chr2	stalkie_big_nohaplotig	exon	90418477	90418628	100	-	.	Parent=FBgn0004913.1.mrna1;Target=FBgn0004913.1 2362 2513 +
Chr2	stalkie_big_nohaplotig	exon	90418692	90419263	100	-	.	Parent=FBgn0004913.1.mrna1;Target=FBgn0004913.1 1790 2361 +
Chr2	stalkie_big_nohaplotig	exon	90420234	90420367	100	-	.	Parent=FBgn0004913.1.mrna1;Target=FBgn0004913.1 1656 1789 +
Chr2	stalkie_big_nohaplotig	exon	90420433	90421061	100	-	.	Parent=FBgn0004913.1.mrna1;Target=FBgn0004913.1 1027 1655 +
Chr2	stalkie_big_nohaplotig	exon	90421147	90421259	100	-	.	Parent=FBgn0004913.1.mrna1;Target=FBgn0004913.1 914 1026 +
Chr2	stalkie_big_nohaplotig	exon	90421328	90422216	100	-	.	Parent=FBgn0004913.1.mrna1;Target=FBgn0004913.1 25 913 +
Chr2	stalkie_big_nohaplotig	exon	90422274	90422297	100	-	.	Parent=FBgn0004913.1.mrna1;Target=FBgn0004913.1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	90417095	90417211	.	-	0	Parent=FBgn0004913.1.mrna1;Target=FBgn0004913.1 3178 3294 +
Chr2	stalkie_big_nohaplotig	CDS	90417648	90418311	.	-	1	Parent=FBgn0004913.1.mrna1;Target=FBgn0004913.1 2514 3177 +
Chr2	stalkie_big_nohaplotig	CDS	90418477	90418628	.	-	0	Parent=FBgn0004913.1.mrna1;Target=FBgn0004913.1 2362 2513 +
Chr2	stalkie_big_nohaplotig	CDS	90418692	90419263	.	-	2	Parent=FBgn0004913.1.mrna1;Target=FBgn0004913.1 1790 2361 +
Chr2	stalkie_big_nohaplotig	CDS	90420234	90420367	.	-	1	Parent=FBgn0004913.1.mrna1;Target=FBgn0004913.1 1656 1789 +
Chr2	stalkie_big_nohaplotig	CDS	90420433	90421061	.	-	0	Parent=FBgn0004913.1.mrna1;Target=FBgn0004913.1 1027 1655 +
Chr2	stalkie_big_nohaplotig	CDS	90421147	90421259	.	-	2	Parent=FBgn0004913.1.mrna1;Target=FBgn0004913.1 914 1026 +
Chr2	stalkie_big_nohaplotig	CDS	90421328	90422216	.	-	0	Parent=FBgn0004913.1.mrna1;Target=FBgn0004913.1 25 913 +
Chr2	stalkie_big_nohaplotig	CDS	90422274	90422297	.	-	0	Parent=FBgn0004913.1.mrna1;Target=FBgn0004913.1 1 24 +
Chr2	gffcl	locus	90442606	90443727	.	+	.	ID=RLOC_00019411;geneIDs=comp148048_c0_seq1.path1;transcripts=comp148048_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90442606	90443727	.	+	.	ID=comp148048_c0_seq1.mrna1;geneID=comp148048_c0_seq1.path1;Name=comp148048_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.8;matches=1097;mismatches=11;indels=14;unknowns=0;Target=comp148048_c0_seq1 1109 2 .;CDS_Target=comp148048_c0_seq1 830 435 .;locus=RLOC_00019411
Chr2	stalkie_big_nohaplotig	exon	90442606	90443727	97	+	.	Parent=comp148048_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	90443039	90443446	.	+	0	Parent=comp148048_c0_seq1.mrna1
Chr2	gffcl	locus	90493157	90493555	.	-	.	ID=RLOC_00019412;geneIDs=comp144380_c0_seq1.path1;transcripts=comp144380_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90493157	90493555	.	-	.	ID=comp144380_c0_seq1.mrna1;geneID=comp144380_c0_seq1.path1;Name=comp144380_c0_seq1;Dir=indeterminatecoverage=94.5;identity=100.0;matches=399;mismatches=0;indels=0;unknowns=0;Target=comp144380_c0_seq1 399 1 .;CDS_Target=comp144380_c0_seq1 139 2 .;locus=RLOC_00019412
Chr2	stalkie_big_nohaplotig	exon	90493157	90493555	100	-	.	Parent=comp144380_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	90493417	90493554	.	-	0	Parent=comp144380_c0_seq1.mrna1
Chr2	gffcl	locus	90551807	90560335	.	+	.	ID=RLOC_00019414;geneIDs=FBgn0085335.1.path1;transcripts=FBgn0085335.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90551807	90560335	.	+	.	ID=FBgn0085335.1.mrna1;geneID=FBgn0085335.1.path1;Name=FBgn0085335.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=8524;mismatches=5;indels=0;unknowns=0;Target=FBgn0085335.1 8529 1 .;locus=RLOC_00019414
Chr2	stalkie_big_nohaplotig	exon	90551807	90560335	99	+	.	Parent=FBgn0085335.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	90551807	90560335	.	+	0	Parent=FBgn0085335.1.mrna1
Chr2	gffcl	locus	90562608	90563487	.	+	.	ID=RLOC_00019415;geneIDs=comp134922_c1_seq1.path1,comp139322_c0_seq1.path1;transcripts=comp134922_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90562998	90563487	.	+	.	ID=comp134922_c1_seq1.mrna1;geneID=comp134922_c1_seq1.path1;Name=comp134922_c1_seq1;Dir=indeterminatecoverage=96.5;identity=99.4;matches=487;mismatches=3;indels=0;unknowns=0;Target=comp134922_c1_seq1 508 19 .;CDS_Target=comp134922_c1_seq1 264 124 .;locus=RLOC_00019415
Chr2	stalkie_big_nohaplotig	exon	90562998	90563487	99	+	.	Parent=comp134922_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	90563103	90563243	.	+	0	Parent=comp134922_c1_seq1.mrna1
Chr2	gffcl	locus	90570266	90570801	.	-	.	ID=RLOC_00019416;geneIDs=comp154416_c0_seq1.path1;transcripts=comp154416_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90570266	90570801	.	-	.	ID=comp154416_c0_seq1.mrna1;geneID=comp154416_c0_seq1.path1;Name=comp154416_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.8;matches=520;mismatches=16;indels=1;unknowns=0;Target=comp154416_c0_seq1 537 1 .;CDS_Target=comp154416_c0_seq1 106 2 .;locus=RLOC_00019416
Chr2	stalkie_big_nohaplotig	exon	90570266	90570801	96	-	.	Parent=comp154416_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	90570696	90570800	.	-	0	Parent=comp154416_c0_seq1.mrna1
Chr2	gffcl	locus	90573693	90574830	.	+	.	ID=RLOC_00019417;geneIDs=comp154224_c0_seq1.path1;transcripts=comp154224_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90573693	90574830	.	+	.	ID=comp154224_c0_seq1.mrna1;geneID=comp154224_c0_seq1.path1;Name=comp154224_c0_seq1;Dir=indeterminatecoverage=88.7;identity=99.6;matches=1136;mismatches=2;indels=2;unknowns=0;Target=comp154224_c0_seq1 1215 76 .;CDS_Target=comp154224_c0_seq1 230 78 .;locus=RLOC_00019417
Chr2	stalkie_big_nohaplotig	exon	90573693	90574830	99	+	.	Parent=comp154224_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	90573695	90573847	.	+	0	Parent=comp154224_c0_seq1.mrna1
Chr2	gffcl	locus	90576053	90588675	.	-	.	ID=RLOC_00019418;geneIDs=FBgn0004436.1.path1;transcripts=FBgn0004436.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90576053	90588675	.	-	.	ID=FBgn0004436.1.mrna1;geneID=FBgn0004436.1.path1;Name=FBgn0004436.1;Dir=sensecoverage=100.0;identity=100.0;matches=459;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019418
Chr2	stalkie_big_nohaplotig	exon	90576053	90576175	100	-	.	Parent=FBgn0004436.1.mrna1;Target=FBgn0004436.1 337 459 +
Chr2	stalkie_big_nohaplotig	exon	90578884	90579169	100	-	.	Parent=FBgn0004436.1.mrna1;Target=FBgn0004436.1 51 336 +
Chr2	stalkie_big_nohaplotig	exon	90588626	90588675	100	-	.	Parent=FBgn0004436.1.mrna1;Target=FBgn0004436.1 1 50 +
Chr2	stalkie_big_nohaplotig	CDS	90576053	90576175	.	-	0	Parent=FBgn0004436.1.mrna1;Target=FBgn0004436.1 337 459 +
Chr2	stalkie_big_nohaplotig	CDS	90578884	90579169	.	-	1	Parent=FBgn0004436.1.mrna1;Target=FBgn0004436.1 51 336 +
Chr2	stalkie_big_nohaplotig	CDS	90588626	90588675	.	-	0	Parent=FBgn0004436.1.mrna1;Target=FBgn0004436.1 1 50 +
Chr2	gffcl	locus	90593138	90593893	.	-	.	ID=RLOC_00019419;geneIDs=FBgn0038545.2.path1;transcripts=FBgn0038545.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90593138	90593893	.	-	.	ID=FBgn0038545.2.mrna1;geneID=FBgn0038545.2.path1;Name=FBgn0038545.2;Dir=sensecoverage=99.4;identity=100.0;matches=513;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019419
Chr2	stalkie_big_nohaplotig	exon	90593138	90593218	100	-	.	Parent=FBgn0038545.2.mrna1;Target=FBgn0038545.2 436 516 +
Chr2	stalkie_big_nohaplotig	exon	90593275	90593325	100	-	.	Parent=FBgn0038545.2.mrna1;Target=FBgn0038545.2 385 435 +
Chr2	stalkie_big_nohaplotig	exon	90593387	90593486	100	-	.	Parent=FBgn0038545.2.mrna1;Target=FBgn0038545.2 285 384 +
Chr2	stalkie_big_nohaplotig	exon	90593547	90593707	100	-	.	Parent=FBgn0038545.2.mrna1;Target=FBgn0038545.2 124 284 +
Chr2	stalkie_big_nohaplotig	exon	90593774	90593893	100	-	.	Parent=FBgn0038545.2.mrna1;Target=FBgn0038545.2 4 123 +
Chr2	stalkie_big_nohaplotig	CDS	90593138	90593218	.	-	0	Parent=FBgn0038545.2.mrna1;Target=FBgn0038545.2 436 516 +
Chr2	stalkie_big_nohaplotig	CDS	90593275	90593325	.	-	0	Parent=FBgn0038545.2.mrna1;Target=FBgn0038545.2 385 435 +
Chr2	stalkie_big_nohaplotig	CDS	90593387	90593486	.	-	1	Parent=FBgn0038545.2.mrna1;Target=FBgn0038545.2 285 384 +
Chr2	stalkie_big_nohaplotig	CDS	90593547	90593707	.	-	0	Parent=FBgn0038545.2.mrna1;Target=FBgn0038545.2 124 284 +
Chr2	stalkie_big_nohaplotig	CDS	90593774	90593893	.	-	0	Parent=FBgn0038545.2.mrna1;Target=FBgn0038545.2 4 123 +
Chr2	stalkie_big_nohaplotig	mRNA	90676564	90682200	.	+	.	ID=ORF163.mrna1;geneID=ORF163.path1;Name=ORF163;Dir=sensecoverage=100.0;identity=99.5;matches=2692;mismatches=14;indels=0;unknowns=0;locus=RLOC_00019420
Chr2	stalkie_big_nohaplotig	exon	90676564	90676703	99	+	.	Parent=ORF163.mrna1;Target=ORF163 1 140 +
Chr2	stalkie_big_nohaplotig	exon	90677089	90677315	100	+	.	Parent=ORF163.mrna1;Target=ORF163 141 367 +
Chr2	stalkie_big_nohaplotig	exon	90679862	90682200	99	+	.	Parent=ORF163.mrna1;Target=ORF163 368 2706 +
Chr2	stalkie_big_nohaplotig	CDS	90676564	90676703	.	+	0	Parent=ORF163.mrna1;Target=ORF163 1 140 +
Chr2	stalkie_big_nohaplotig	CDS	90677089	90677315	.	+	1	Parent=ORF163.mrna1;Target=ORF163 141 367 +
Chr2	stalkie_big_nohaplotig	CDS	90679862	90682200	.	+	2	Parent=ORF163.mrna1;Target=ORF163 368 2706 +
Chr2	gffcl	locus	90733317	90734027	.	+	.	ID=RLOC_00019421;geneIDs=comp151673_c0_seq1.path1;transcripts=comp151673_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90733317	90734027	.	+	.	ID=comp151673_c0_seq1.mrna1;geneID=comp151673_c0_seq1.path1;Name=comp151673_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=709;mismatches=2;indels=2;unknowns=0;Target=comp151673_c0_seq1 713 1 .;CDS_Target=comp151673_c0_seq1 327 202 .;locus=RLOC_00019421
Chr2	stalkie_big_nohaplotig	exon	90733317	90734027	99	+	.	Parent=comp151673_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	90733518	90733643	.	+	0	Parent=comp151673_c0_seq1.mrna1
Chr2	gffcl	locus	90734910	90735488	.	+	.	ID=RLOC_00019422;geneIDs=comp152047_c0_seq1.path1;transcripts=comp152047_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90734910	90735488	.	+	.	ID=comp152047_c0_seq1.mrna1;geneID=comp152047_c0_seq1.path1;Name=comp152047_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=576;mismatches=3;indels=11;unknowns=0;Target=comp152047_c0_seq1 590 1 .;CDS_Target=comp152047_c0_seq1 503 465 .;locus=RLOC_00019422
Chr2	stalkie_big_nohaplotig	exon	90734910	90735488	97	+	.	Parent=comp152047_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	90735363	90735401	.	+	0	Parent=comp152047_c0_seq1.mrna1
Chr2	gffcl	locus	90736873	90737137	.	+	.	ID=RLOC_00019423;geneIDs=comp1933626_c0_seq1.path1;transcripts=comp1933626_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90736873	90737137	.	+	.	ID=comp1933626_c0_seq1.mrna1;geneID=comp1933626_c0_seq1.path1;Name=comp1933626_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.6;matches=264;mismatches=1;indels=0;unknowns=0;Target=comp1933626_c0_seq1 267 3 .;CDS_Target=comp1933626_c0_seq1 45 4 .;locus=RLOC_00019423
Chr2	stalkie_big_nohaplotig	exon	90736873	90737137	99	+	.	Parent=comp1933626_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	90736874	90736915	.	+	0	Parent=comp1933626_c0_seq1.mrna1
Chr2	gffcl	locus	90773518	90773727	.	+	.	ID=RLOC_00019424;geneIDs=FBgn0000036.1.path1,comp156484_c5_seq1.path1;transcripts=FBgn0000036.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90773518	90773727	.	+	.	ID=FBgn0000036.1.mrna1;geneID=FBgn0000036.1.path1;Name=FBgn0000036.1;Dir=indeterminatecoverage=11.8;identity=100.0;matches=210;mismatches=0;indels=0;unknowns=0;Target=FBgn0000036.1 300 91 .;locus=RLOC_00019424
Chr2	stalkie_big_nohaplotig	exon	90773518	90773727	100	+	.	Parent=FBgn0000036.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	90773518	90773727	.	+	0	Parent=FBgn0000036.1.mrna1
Chr2	gffcl	locus	90887107	90911029	.	-	.	ID=RLOC_00019425;geneIDs=comp112695_c0_seq1.path1;transcripts=comp112695_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	90887107	90911029	.	-	.	ID=comp112695_c0_seq1.mrna1;geneID=comp112695_c0_seq1.path1;Name=comp112695_c0_seq1;Dir=indeterminatecoverage=91.1;identity=89.3;matches=258;mismatches=8;indels=23;unknowns=0;Target=comp112695_c0_seq1 42 1 .;locus=RLOC_00019425
Chr2	stalkie_big_nohaplotig	exon	90887107	90887113	100	-	.	Parent=comp112695_c0_seq1.mrna1;Target=comp112695_c0_seq1 266 260 .
Chr2	stalkie_big_nohaplotig	exon	90892192	90892198	100	-	.	Parent=comp112695_c0_seq1.mrna1;Target=comp112695_c0_seq1 259 253 .
Chr2	stalkie_big_nohaplotig	exon	90896507	90896546	37	-	.	Parent=comp112695_c0_seq1.mrna1;Target=comp112695_c0_seq1 252 236 .
Chr2	stalkie_big_nohaplotig	exon	90903778	90903781	100	-	.	Parent=comp112695_c0_seq1.mrna1;Target=comp112695_c0_seq1 235 232 .
Chr2	stalkie_big_nohaplotig	exon	90910799	90911029	97	-	.	Parent=comp112695_c0_seq1.mrna1;Target=comp112695_c0_seq1 231 1 .
Chr2	stalkie_big_nohaplotig	CDS	90910988	90911029	.	-	0	Parent=comp112695_c0_seq1.mrna1
Chr2	gffcl	locus	91019307	91021609	.	-	.	ID=RLOC_00019427;geneIDs=FBgn0033323.1.path1;transcripts=FBgn0033323.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91019307	91021609	.	-	.	ID=FBgn0033323.1.mrna1;geneID=FBgn0033323.1.path1;Name=FBgn0033323.1;Dir=sensecoverage=100.0;identity=99.9;matches=1736;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019427
Chr2	stalkie_big_nohaplotig	exon	91019307	91019504	100	-	.	Parent=FBgn0033323.1.mrna1;Target=FBgn0033323.1 1540 1737 +
Chr2	stalkie_big_nohaplotig	exon	91019563	91019630	100	-	.	Parent=FBgn0033323.1.mrna1;Target=FBgn0033323.1 1472 1539 +
Chr2	stalkie_big_nohaplotig	exon	91019705	91019939	100	-	.	Parent=FBgn0033323.1.mrna1;Target=FBgn0033323.1 1237 1471 +
Chr2	stalkie_big_nohaplotig	exon	91020001	91020119	100	-	.	Parent=FBgn0033323.1.mrna1;Target=FBgn0033323.1 1118 1236 +
Chr2	stalkie_big_nohaplotig	exon	91020175	91020549	100	-	.	Parent=FBgn0033323.1.mrna1;Target=FBgn0033323.1 743 1117 +
Chr2	stalkie_big_nohaplotig	exon	91020623	91020661	100	-	.	Parent=FBgn0033323.1.mrna1;Target=FBgn0033323.1 704 742 +
Chr2	stalkie_big_nohaplotig	exon	91020741	91020815	98	-	.	Parent=FBgn0033323.1.mrna1;Target=FBgn0033323.1 629 703 +
Chr2	stalkie_big_nohaplotig	exon	91020874	91021202	100	-	.	Parent=FBgn0033323.1.mrna1;Target=FBgn0033323.1 300 628 +
Chr2	stalkie_big_nohaplotig	exon	91021262	91021499	100	-	.	Parent=FBgn0033323.1.mrna1;Target=FBgn0033323.1 62 299 +
Chr2	stalkie_big_nohaplotig	exon	91021549	91021609	100	-	.	Parent=FBgn0033323.1.mrna1;Target=FBgn0033323.1 1 61 +
Chr2	stalkie_big_nohaplotig	CDS	91019307	91019504	.	-	0	Parent=FBgn0033323.1.mrna1;Target=FBgn0033323.1 1540 1737 +
Chr2	stalkie_big_nohaplotig	CDS	91019563	91019630	.	-	2	Parent=FBgn0033323.1.mrna1;Target=FBgn0033323.1 1472 1539 +
Chr2	stalkie_big_nohaplotig	CDS	91019705	91019939	.	-	0	Parent=FBgn0033323.1.mrna1;Target=FBgn0033323.1 1237 1471 +
Chr2	stalkie_big_nohaplotig	CDS	91020001	91020119	.	-	2	Parent=FBgn0033323.1.mrna1;Target=FBgn0033323.1 1118 1236 +
Chr2	stalkie_big_nohaplotig	CDS	91020175	91020549	.	-	2	Parent=FBgn0033323.1.mrna1;Target=FBgn0033323.1 743 1117 +
Chr2	stalkie_big_nohaplotig	CDS	91020623	91020661	.	-	2	Parent=FBgn0033323.1.mrna1;Target=FBgn0033323.1 704 742 +
Chr2	stalkie_big_nohaplotig	CDS	91020741	91020815	.	-	2	Parent=FBgn0033323.1.mrna1;Target=FBgn0033323.1 629 703 +
Chr2	stalkie_big_nohaplotig	CDS	91020874	91021202	.	-	1	Parent=FBgn0033323.1.mrna1;Target=FBgn0033323.1 300 628 +
Chr2	stalkie_big_nohaplotig	CDS	91021262	91021499	.	-	2	Parent=FBgn0033323.1.mrna1;Target=FBgn0033323.1 62 299 +
Chr2	stalkie_big_nohaplotig	CDS	91021549	91021609	.	-	0	Parent=FBgn0033323.1.mrna1;Target=FBgn0033323.1 1 61 +
Chr2	gffcl	locus	91027145	91027870	.	+	.	ID=RLOC_00019428;geneIDs=comp148710_c0_seq1.path1;transcripts=comp148710_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91027145	91027870	.	+	.	ID=comp148710_c0_seq1.mrna1;geneID=comp148710_c0_seq1.path1;Name=comp148710_c0_seq1;Dir=indeterminatecoverage=99.2;identity=100.0;matches=726;mismatches=0;indels=0;unknowns=0;Target=comp148710_c0_seq1 732 7 .;CDS_Target=comp148710_c0_seq1 607 524 .;locus=RLOC_00019428
Chr2	stalkie_big_nohaplotig	exon	91027145	91027870	100	+	.	Parent=comp148710_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	91027662	91027745	.	+	0	Parent=comp148710_c0_seq1.mrna1
Chr2	gffcl	locus	91066806	91066966	.	+	.	ID=RLOC_00019430;geneIDs=comp159900_c5_seq1.path2;transcripts=comp159900_c5_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	91066806	91066966	.	+	.	ID=comp159900_c5_seq1.mrna2;geneID=comp159900_c5_seq1.path2;Name=comp159900_c5_seq1;Dir=indeterminatecoverage=9.7;identity=90.7;matches=146;mismatches=15;indels=0;unknowns=0;Target=comp159900_c5_seq1 1657 1497 .;locus=RLOC_00019430
Chr2	stalkie_big_nohaplotig	exon	91066806	91066966	90	+	.	Parent=comp159900_c5_seq1.mrna2
Chr2	gffcl	locus	91091986	91092803	.	-	.	ID=RLOC_00019431;geneIDs=comp146416_c0_seq1.path1,comp146491_c0_seq1.path1;transcripts=comp146491_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91092343	91092803	.	-	.	ID=comp146491_c0_seq1.mrna1;geneID=comp146491_c0_seq1.path1;Name=comp146491_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=457;mismatches=4;indels=2;unknowns=0;Target=comp146491_c0_seq1 463 1 .;CDS_Target=comp146491_c0_seq1 273 184 .;locus=RLOC_00019431
Chr2	stalkie_big_nohaplotig	exon	91092343	91092803	98	-	.	Parent=comp146491_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	91092531	91092620	.	-	0	Parent=comp146491_c0_seq1.mrna1
Chr2	gffcl	locus	91172774	91174549	.	-	.	ID=RLOC_00019433;geneIDs=comp142251_c1_seq1.path2;transcripts=comp142251_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	91172774	91174549	.	-	.	ID=comp142251_c1_seq1.mrna2;geneID=comp142251_c1_seq1.path2;Name=comp142251_c1_seq1;Dir=indeterminatecoverage=60.9;identity=93.4;matches=553;mismatches=29;indels=10;unknowns=0;Target=comp142251_c1_seq1 716 334 .;locus=RLOC_00019433
Chr2	stalkie_big_nohaplotig	exon	91172774	91172780	100	-	.	Parent=comp142251_c1_seq1.mrna2;Target=comp142251_c1_seq1 921 915 .
Chr2	stalkie_big_nohaplotig	exon	91173971	91174549	93	-	.	Parent=comp142251_c1_seq1.mrna2;Target=comp142251_c1_seq1 914 334 .
Chr2	stalkie_big_nohaplotig	CDS	91174173	91174549	.	-	1	Parent=comp142251_c1_seq1.mrna2
Chr2	gffcl	locus	91187184	91188054	.	-	.	ID=RLOC_00019434;geneIDs=comp158266_c3_seq1.path2;transcripts=comp158266_c3_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	91187184	91188054	.	-	.	ID=comp158266_c3_seq1.mrna2;geneID=comp158266_c3_seq1.path2;Name=comp158266_c3_seq1;Dir=indeterminatecoverage=95.3;identity=91.1;matches=848;mismatches=23;indels=60;unknowns=0;Target=comp158266_c3_seq1 931 1 .;CDS_Target=comp158266_c3_seq1 298 2 .;locus=RLOC_00019434
Chr2	stalkie_big_nohaplotig	exon	91187184	91188054	91	-	.	Parent=comp158266_c3_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	91187757	91188053	.	-	0	Parent=comp158266_c3_seq1.mrna2
Chr2	gffcl	locus	91221049	91222246	.	-	.	ID=RLOC_00019435;geneIDs=comp159538_c0_seq1.path1;transcripts=comp159538_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91221049	91222246	.	-	.	ID=comp159538_c0_seq1.mrna1;geneID=comp159538_c0_seq1.path1;Name=comp159538_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.0;matches=1183;mismatches=15;indels=21;unknowns=0;Target=comp159538_c0_seq1 1219 1 .;CDS_Target=comp159538_c0_seq1 1001 846 .;locus=RLOC_00019435
Chr2	stalkie_big_nohaplotig	exon	91221049	91222246	97	-	.	Parent=comp159538_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	91221266	91221421	.	-	0	Parent=comp159538_c0_seq1.mrna1
Chr2	gffcl	locus	91224738	91249429	.	-	.	ID=RLOC_00019436;geneIDs=FBgn0016650.1.path1;transcripts=FBgn0016650.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91224738	91249429	.	-	.	ID=FBgn0016650.1.mrna1;geneID=FBgn0016650.1.path1;Name=FBgn0016650.1;Dir=sensecoverage=100.0;identity=100.0;matches=2634;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019436
Chr2	stalkie_big_nohaplotig	exon	91224738	91224912	100	-	.	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 2460 2634 +
Chr2	stalkie_big_nohaplotig	exon	91224993	91225189	100	-	.	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 2263 2459 +
Chr2	stalkie_big_nohaplotig	exon	91225256	91225451	100	-	.	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 2067 2262 +
Chr2	stalkie_big_nohaplotig	exon	91225514	91225742	100	-	.	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 1838 2066 +
Chr2	stalkie_big_nohaplotig	exon	91227629	91227774	100	-	.	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 1692 1837 +
Chr2	stalkie_big_nohaplotig	exon	91227861	91228013	100	-	.	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 1539 1691 +
Chr2	stalkie_big_nohaplotig	exon	91230878	91231063	100	-	.	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 1353 1538 +
Chr2	stalkie_big_nohaplotig	exon	91231233	91231486	100	-	.	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 1099 1352 +
Chr2	stalkie_big_nohaplotig	exon	91231597	91231714	100	-	.	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 981 1098 +
Chr2	stalkie_big_nohaplotig	exon	91233564	91233635	100	-	.	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 909 980 +
Chr2	stalkie_big_nohaplotig	exon	91233747	91233815	100	-	.	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 840 908 +
Chr2	stalkie_big_nohaplotig	exon	91234540	91234605	100	-	.	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 774 839 +
Chr2	stalkie_big_nohaplotig	exon	91236304	91236378	100	-	.	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 699 773 +
Chr2	stalkie_big_nohaplotig	exon	91236915	91236992	100	-	.	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 621 698 +
Chr2	stalkie_big_nohaplotig	exon	91237232	91237306	100	-	.	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 546 620 +
Chr2	stalkie_big_nohaplotig	exon	91237371	91237522	100	-	.	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 394 545 +
Chr2	stalkie_big_nohaplotig	exon	91249037	91249429	100	-	.	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 1 393 +
Chr2	stalkie_big_nohaplotig	CDS	91224738	91224912	.	-	1	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 2460 2634 +
Chr2	stalkie_big_nohaplotig	CDS	91224993	91225189	.	-	0	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 2263 2459 +
Chr2	stalkie_big_nohaplotig	CDS	91225256	91225451	.	-	1	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 2067 2262 +
Chr2	stalkie_big_nohaplotig	CDS	91225514	91225742	.	-	2	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 1838 2066 +
Chr2	stalkie_big_nohaplotig	CDS	91227629	91227774	.	-	1	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 1692 1837 +
Chr2	stalkie_big_nohaplotig	CDS	91227861	91228013	.	-	1	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 1539 1691 +
Chr2	stalkie_big_nohaplotig	CDS	91230878	91231063	.	-	1	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 1353 1538 +
Chr2	stalkie_big_nohaplotig	CDS	91231233	91231486	.	-	0	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 1099 1352 +
Chr2	stalkie_big_nohaplotig	CDS	91231597	91231714	.	-	1	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 981 1098 +
Chr2	stalkie_big_nohaplotig	CDS	91233564	91233635	.	-	1	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 909 980 +
Chr2	stalkie_big_nohaplotig	CDS	91233747	91233815	.	-	1	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 840 908 +
Chr2	stalkie_big_nohaplotig	CDS	91234540	91234605	.	-	1	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 774 839 +
Chr2	stalkie_big_nohaplotig	CDS	91236304	91236378	.	-	1	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 699 773 +
Chr2	stalkie_big_nohaplotig	CDS	91236915	91236992	.	-	1	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 621 698 +
Chr2	stalkie_big_nohaplotig	CDS	91237232	91237306	.	-	1	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 546 620 +
Chr2	stalkie_big_nohaplotig	CDS	91237371	91237522	.	-	0	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 394 545 +
Chr2	stalkie_big_nohaplotig	CDS	91249037	91249429	.	-	0	Parent=FBgn0016650.1.mrna1;Target=FBgn0016650.1 1 393 +
Chr2	gffcl	locus	91323297	91327335	.	-	.	ID=RLOC_00019437;geneIDs=FBgn0261987.1.path1;transcripts=FBgn0261987.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91323297	91327335	.	-	.	ID=FBgn0261987.1.mrna1;geneID=FBgn0261987.1.path1;Name=FBgn0261987.1;Dir=sensecoverage=100.0;identity=100.0;matches=2474;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019437
Chr2	stalkie_big_nohaplotig	exon	91323297	91323360	100	-	.	Parent=FBgn0261987.1.mrna1;Target=FBgn0261987.1 2412 2475 +
Chr2	stalkie_big_nohaplotig	exon	91323465	91323784	100	-	.	Parent=FBgn0261987.1.mrna1;Target=FBgn0261987.1 2092 2411 +
Chr2	stalkie_big_nohaplotig	exon	91323931	91324089	100	-	.	Parent=FBgn0261987.1.mrna1;Target=FBgn0261987.1 1933 2091 +
Chr2	stalkie_big_nohaplotig	exon	91324150	91324649	99	-	.	Parent=FBgn0261987.1.mrna1;Target=FBgn0261987.1 1433 1932 +
Chr2	stalkie_big_nohaplotig	exon	91325011	91325400	100	-	.	Parent=FBgn0261987.1.mrna1;Target=FBgn0261987.1 1043 1432 +
Chr2	stalkie_big_nohaplotig	exon	91326042	91326439	100	-	.	Parent=FBgn0261987.1.mrna1;Target=FBgn0261987.1 645 1042 +
Chr2	stalkie_big_nohaplotig	exon	91326513	91326756	100	-	.	Parent=FBgn0261987.1.mrna1;Target=FBgn0261987.1 401 644 +
Chr2	stalkie_big_nohaplotig	exon	91326808	91326993	100	-	.	Parent=FBgn0261987.1.mrna1;Target=FBgn0261987.1 215 400 +
Chr2	stalkie_big_nohaplotig	exon	91327122	91327335	100	-	.	Parent=FBgn0261987.1.mrna1;Target=FBgn0261987.1 1 214 +
Chr2	stalkie_big_nohaplotig	CDS	91323297	91323360	.	-	1	Parent=FBgn0261987.1.mrna1;Target=FBgn0261987.1 2412 2475 +
Chr2	stalkie_big_nohaplotig	CDS	91323465	91323784	.	-	0	Parent=FBgn0261987.1.mrna1;Target=FBgn0261987.1 2092 2411 +
Chr2	stalkie_big_nohaplotig	CDS	91323931	91324089	.	-	0	Parent=FBgn0261987.1.mrna1;Target=FBgn0261987.1 1933 2091 +
Chr2	stalkie_big_nohaplotig	CDS	91324150	91324649	.	-	2	Parent=FBgn0261987.1.mrna1;Target=FBgn0261987.1 1433 1932 +
Chr2	stalkie_big_nohaplotig	CDS	91325011	91325400	.	-	2	Parent=FBgn0261987.1.mrna1;Target=FBgn0261987.1 1043 1432 +
Chr2	stalkie_big_nohaplotig	CDS	91326042	91326439	.	-	1	Parent=FBgn0261987.1.mrna1;Target=FBgn0261987.1 645 1042 +
Chr2	stalkie_big_nohaplotig	CDS	91326513	91326756	.	-	2	Parent=FBgn0261987.1.mrna1;Target=FBgn0261987.1 401 644 +
Chr2	stalkie_big_nohaplotig	CDS	91326808	91326993	.	-	2	Parent=FBgn0261987.1.mrna1;Target=FBgn0261987.1 215 400 +
Chr2	stalkie_big_nohaplotig	CDS	91327122	91327335	.	-	0	Parent=FBgn0261987.1.mrna1;Target=FBgn0261987.1 1 214 +
Chr2	gffcl	locus	91329911	91330252	.	-	.	ID=RLOC_00019438;geneIDs=comp145316_c0_seq1.path1;transcripts=comp145316_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91329911	91330252	.	-	.	ID=comp145316_c0_seq1.mrna1;geneID=comp145316_c0_seq1.path1;Name=comp145316_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=340;mismatches=2;indels=5;unknowns=0;Target=comp145316_c0_seq1 347 1 .;CDS_Target=comp145316_c0_seq1 143 33 .;locus=RLOC_00019438
Chr2	stalkie_big_nohaplotig	exon	91329911	91330252	97	-	.	Parent=comp145316_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	91330110	91330220	.	-	0	Parent=comp145316_c0_seq1.mrna1
Chr2	gffcl	locus	91374441	91376277	.	-	.	ID=RLOC_00019439;geneIDs=comp159021_c2_seq1.path1;transcripts=comp159021_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91374441	91376277	.	-	.	ID=comp159021_c2_seq1.mrna1;geneID=comp159021_c2_seq1.path1;Name=comp159021_c2_seq1;Dir=indeterminatecoverage=96.0;identity=96.7;matches=1800;mismatches=31;indels=31;unknowns=0;Target=comp159021_c2_seq1 1872 17 .;CDS_Target=comp159021_c2_seq1 1335 1189 .;locus=RLOC_00019439
Chr2	stalkie_big_nohaplotig	exon	91374441	91376277	96	-	.	Parent=comp159021_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	91374978	91375124	.	-	0	Parent=comp159021_c2_seq1.mrna1
Chr2	gffcl	locus	91377646	91379378	.	-	.	ID=RLOC_00019440;geneIDs=comp163285_c0_seq1.path1;transcripts=comp163285_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91377646	91379378	.	-	.	ID=comp163285_c0_seq1.mrna1;geneID=comp163285_c0_seq1.path1;Name=comp163285_c0_seq1;Dir=antisensecoverage=99.8;identity=94.5;matches=1256;mismatches=54;indels=19;unknowns=0;Target=comp163285_c0_seq1 1193 1348 .;locus=RLOC_00019440
Chr2	stalkie_big_nohaplotig	exon	91377646	91377963	97	-	.	Parent=comp163285_c0_seq1.mrna1;Target=comp163285_c0_seq1 3 320 -
Chr2	stalkie_big_nohaplotig	exon	91378028	91378181	98	-	.	Parent=comp163285_c0_seq1.mrna1;Target=comp163285_c0_seq1 321 474 -
Chr2	stalkie_big_nohaplotig	exon	91378538	91379378	92	-	.	Parent=comp163285_c0_seq1.mrna1;Target=comp163285_c0_seq1 496 1349 -
Chr2	stalkie_big_nohaplotig	CDS	91379222	91379377	.	-	0	Parent=comp163285_c0_seq1.mrna1
Chr2	gffcl	locus	91381033	91381767	.	+	.	ID=RLOC_00019441;geneIDs=FBgn0010894.1.path1;transcripts=FBgn0010894.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91381033	91381767	.	+	.	ID=FBgn0010894.1.mrna1;geneID=FBgn0010894.1.path1;Name=FBgn0010894.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=735;mismatches=0;indels=0;unknowns=0;Target=FBgn0010894.1 735 1 .;locus=RLOC_00019441
Chr2	stalkie_big_nohaplotig	exon	91381033	91381767	100	+	.	Parent=FBgn0010894.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	91381033	91381767	.	+	0	Parent=FBgn0010894.1.mrna1
Chr2	gffcl	locus	91416617	91417025	.	+	.	ID=RLOC_00019442;geneIDs=FBgn0039687.1.path2;transcripts=FBgn0039687.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	91416617	91417025	.	+	.	ID=FBgn0039687.1.mrna2;geneID=FBgn0039687.1.path2;Name=FBgn0039687.1;Dir=sensecoverage=54.6;identity=99.7;matches=353;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019442
Chr2	stalkie_big_nohaplotig	exon	91416617	91416738	100	+	.	Parent=FBgn0039687.1.mrna2;Target=FBgn0039687.1 295 416 +
Chr2	stalkie_big_nohaplotig	exon	91416794	91417025	99	+	.	Parent=FBgn0039687.1.mrna2;Target=FBgn0039687.1 417 648 +
Chr2	stalkie_big_nohaplotig	CDS	91416617	91416738	.	+	0	Parent=FBgn0039687.1.mrna2;Target=FBgn0039687.1 295 416 +
Chr2	stalkie_big_nohaplotig	CDS	91416794	91417025	.	+	1	Parent=FBgn0039687.1.mrna2;Target=FBgn0039687.1 417 648 +
Chr2	gffcl	locus	91417089	91418016	.	-	.	ID=RLOC_00019443;geneIDs=FBgn0024841.1.path1;transcripts=FBgn0024841.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91417089	91418016	.	-	.	ID=FBgn0024841.1.mrna1;geneID=FBgn0024841.1.path1;Name=FBgn0024841.1;Dir=sensecoverage=100.0;identity=99.8;matches=488;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019443
Chr2	stalkie_big_nohaplotig	exon	91417089	91417385	99	-	.	Parent=FBgn0024841.1.mrna1;Target=FBgn0024841.1 193 489 +
Chr2	stalkie_big_nohaplotig	exon	91417762	91417837	100	-	.	Parent=FBgn0024841.1.mrna1;Target=FBgn0024841.1 117 192 +
Chr2	stalkie_big_nohaplotig	exon	91417901	91418016	100	-	.	Parent=FBgn0024841.1.mrna1;Target=FBgn0024841.1 1 116 +
Chr2	stalkie_big_nohaplotig	CDS	91417089	91417385	.	-	0	Parent=FBgn0024841.1.mrna1;Target=FBgn0024841.1 193 489 +
Chr2	stalkie_big_nohaplotig	CDS	91417762	91417837	.	-	1	Parent=FBgn0024841.1.mrna1;Target=FBgn0024841.1 117 192 +
Chr2	stalkie_big_nohaplotig	CDS	91417901	91418016	.	-	0	Parent=FBgn0024841.1.mrna1;Target=FBgn0024841.1 1 116 +
Chr2	gffcl	locus	91419377	91419476	.	+	.	ID=RLOC_00019444;geneIDs=FBgn0038223.1.path1;transcripts=FBgn0038223.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91419377	91419476	.	+	.	ID=FBgn0038223.1.mrna1;geneID=FBgn0038223.1.path1;Name=FBgn0038223.1;Dir=indeterminatecoverage=2.9;identity=100.0;matches=100;mismatches=0;indels=0;unknowns=0;Target=FBgn0038223.1 100 1 .;locus=RLOC_00019444
Chr2	stalkie_big_nohaplotig	exon	91419377	91419476	100	+	.	Parent=FBgn0038223.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	91419377	91419476	.	+	0	Parent=FBgn0038223.1.mrna1
Chr2	gffcl	locus	91422702	91425385	.	+	.	ID=RLOC_00019445;geneIDs=comp160259_c0_seq1.path4;transcripts=comp160259_c0_seq1.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	91422702	91425385	.	+	.	ID=comp160259_c0_seq1.mrna4;geneID=comp160259_c0_seq1.path4;Name=comp160259_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.0;matches=990;mismatches=17;indels=14;unknowns=0;Target=comp160259_c0_seq1 929 837 .;locus=RLOC_00019445
Chr2	stalkie_big_nohaplotig	exon	91422702	91422922	90	+	.	Parent=comp160259_c0_seq1.mrna4;Target=comp160259_c0_seq1 207 1 .
Chr2	stalkie_big_nohaplotig	exon	91424586	91425385	98	+	.	Parent=comp160259_c0_seq1.mrna4;Target=comp160259_c0_seq1 1007 208 .
Chr2	stalkie_big_nohaplotig	CDS	91425215	91425307	.	+	0	Parent=comp160259_c0_seq1.mrna4
Chr2	gffcl	locus	91536070	91544942	.	-	.	ID=RLOC_00019446;geneIDs=comp160586_c2_seq1.path1;transcripts=comp160586_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91536070	91544942	.	-	.	ID=comp160586_c2_seq1.mrna1;geneID=comp160586_c2_seq1.path1;Name=comp160586_c2_seq1;Dir=antisensecoverage=100.0;identity=93.9;matches=1681;mismatches=52;indels=57;unknowns=0;locus=RLOC_00019446
Chr2	stalkie_big_nohaplotig	exon	91536070	91536185	98	-	.	Parent=comp160586_c2_seq1.mrna1;Target=comp160586_c2_seq1 1 116 -
Chr2	stalkie_big_nohaplotig	exon	91543299	91544942	93	-	.	Parent=comp160586_c2_seq1.mrna1;Target=comp160586_c2_seq1 117 1763 -
Chr2	stalkie_big_nohaplotig	CDS	91536070	91536185	.	-	2	Parent=comp160586_c2_seq1.mrna1;Target=comp160586_c2_seq1 1 116 .
Chr2	stalkie_big_nohaplotig	CDS	91543299	91544232	.	-	0	Parent=comp160586_c2_seq1.mrna1;Target=comp160586_c2_seq1 117 1050 .
Chr2	gffcl	locus	91556090	91556844	.	+	.	ID=RLOC_00019448;geneIDs=FBgn0261592.1.path1;transcripts=FBgn0261592.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91556090	91556844	.	+	.	ID=FBgn0261592.1.mrna1;geneID=FBgn0261592.1.path1;Name=FBgn0261592.1;Dir=sensecoverage=100.0;identity=99.8;matches=479;mismatches=0;indels=1;unknowns=0;locus=RLOC_00019448
Chr2	stalkie_big_nohaplotig	exon	91556090	91556218	100	+	.	Parent=FBgn0261592.1.mrna1;Target=FBgn0261592.1 1 129 +
Chr2	stalkie_big_nohaplotig	exon	91556429	91556633	100	+	.	Parent=FBgn0261592.1.mrna1;Target=FBgn0261592.1 130 334 +
Chr2	stalkie_big_nohaplotig	exon	91556700	91556844	99	+	.	Parent=FBgn0261592.1.mrna1;Target=FBgn0261592.1 335 480 +
Chr2	stalkie_big_nohaplotig	CDS	91556090	91556218	.	+	0	Parent=FBgn0261592.1.mrna1;Target=FBgn0261592.1 1 129 +
Chr2	stalkie_big_nohaplotig	CDS	91556429	91556633	.	+	0	Parent=FBgn0261592.1.mrna1;Target=FBgn0261592.1 130 334 +
Chr2	stalkie_big_nohaplotig	CDS	91556700	91556844	.	+	2	Parent=FBgn0261592.1.mrna1;Target=FBgn0261592.1 335 480 +
Chr2	gffcl	locus	91557502	91558080	.	+	.	ID=RLOC_00019449;geneIDs=comp146437_c0_seq1.path1;transcripts=comp146437_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91557502	91558080	.	+	.	ID=comp146437_c0_seq1.mrna1;geneID=comp146437_c0_seq1.path1;Name=comp146437_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=576;mismatches=3;indels=0;unknowns=0;Target=comp146437_c0_seq1 579 1 .;CDS_Target=comp146437_c0_seq1 398 318 .;locus=RLOC_00019449
Chr2	stalkie_big_nohaplotig	exon	91557502	91558080	99	+	.	Parent=comp146437_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	91557819	91557899	.	+	0	Parent=comp146437_c0_seq1.mrna1
Chr2	gffcl	locus	91587428	91632765	.	-	.	ID=RLOC_00019450;geneIDs=comp157256_c2_seq1.path1;transcripts=comp157256_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91587428	91632765	.	-	.	ID=comp157256_c2_seq1.mrna1;geneID=comp157256_c2_seq1.path1;Name=comp157256_c2_seq1;Dir=sensecoverage=99.8;identity=99.5;matches=1076;mismatches=4;indels=1;unknowns=0;locus=RLOC_00019450
Chr2	stalkie_big_nohaplotig	exon	91587428	91587615	100	-	.	Parent=comp157256_c2_seq1.mrna1;Target=comp157256_c2_seq1 894 1081 +
Chr2	stalkie_big_nohaplotig	exon	91587672	91587734	96	-	.	Parent=comp157256_c2_seq1.mrna1;Target=comp157256_c2_seq1 830 893 +
Chr2	stalkie_big_nohaplotig	exon	91587791	91587879	98	-	.	Parent=comp157256_c2_seq1.mrna1;Target=comp157256_c2_seq1 741 829 +
Chr2	stalkie_big_nohaplotig	exon	91587938	91588006	100	-	.	Parent=comp157256_c2_seq1.mrna1;Target=comp157256_c2_seq1 672 740 +
Chr2	stalkie_big_nohaplotig	exon	91588078	91588146	97	-	.	Parent=comp157256_c2_seq1.mrna1;Target=comp157256_c2_seq1 603 671 +
Chr2	stalkie_big_nohaplotig	exon	91588227	91588485	100	-	.	Parent=comp157256_c2_seq1.mrna1;Target=comp157256_c2_seq1 344 602 +
Chr2	stalkie_big_nohaplotig	exon	91632423	91632765	100	-	.	Parent=comp157256_c2_seq1.mrna1;Target=comp157256_c2_seq1 1 343 +
Chr2	stalkie_big_nohaplotig	CDS	91587729	91587734	.	-	0	Parent=comp157256_c2_seq1.mrna1;Target=comp157256_c2_seq1 830 835 +
Chr2	stalkie_big_nohaplotig	CDS	91587791	91587879	.	-	2	Parent=comp157256_c2_seq1.mrna1;Target=comp157256_c2_seq1 741 829 +
Chr2	stalkie_big_nohaplotig	CDS	91587938	91588006	.	-	2	Parent=comp157256_c2_seq1.mrna1;Target=comp157256_c2_seq1 672 740 +
Chr2	stalkie_big_nohaplotig	CDS	91588078	91588146	.	-	2	Parent=comp157256_c2_seq1.mrna1;Target=comp157256_c2_seq1 603 671 +
Chr2	stalkie_big_nohaplotig	CDS	91588227	91588401	.	-	0	Parent=comp157256_c2_seq1.mrna1;Target=comp157256_c2_seq1 428 602 +
Chr2	gffcl	locus	91591906	91593567	.	-	.	ID=RLOC_00019451;geneIDs=ORF608.path1;transcripts=ORF608.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91591906	91593567	.	-	.	ID=ORF608.mrna1;geneID=ORF608.path1;Name=ORF608;Dir=sensecoverage=100.0;identity=98.1;matches=1584;mismatches=27;indels=3;unknowns=0;locus=RLOC_00019451
Chr2	stalkie_big_nohaplotig	exon	91591906	91593350	98	-	.	Parent=ORF608.mrna1;Target=ORF608 167 1614 +
Chr2	stalkie_big_nohaplotig	exon	91593402	91593567	98	-	.	Parent=ORF608.mrna1;Target=ORF608 1 166 +
Chr2	stalkie_big_nohaplotig	CDS	91591906	91593350	.	-	2	Parent=ORF608.mrna1;Target=ORF608 167 1614 +
Chr2	stalkie_big_nohaplotig	CDS	91593402	91593567	.	-	0	Parent=ORF608.mrna1;Target=ORF608 1 166 +
Chr2	gffcl	locus	91594602	91595483	.	-	.	ID=RLOC_00019452;geneIDs=ORF2726.path1;transcripts=ORF2726.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91594602	91595483	.	-	.	ID=ORF2726.mrna1;geneID=ORF2726.path1;Name=ORF2726;Dir=sensecoverage=100.0;identity=99.8;matches=814;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019452
Chr2	stalkie_big_nohaplotig	exon	91594602	91595195	99	-	.	Parent=ORF2726.mrna1;Target=ORF2726 223 816 +
Chr2	stalkie_big_nohaplotig	exon	91595262	91595483	100	-	.	Parent=ORF2726.mrna1;Target=ORF2726 1 222 +
Chr2	stalkie_big_nohaplotig	CDS	91594602	91595195	.	-	0	Parent=ORF2726.mrna1;Target=ORF2726 223 816 +
Chr2	stalkie_big_nohaplotig	CDS	91595262	91595483	.	-	0	Parent=ORF2726.mrna1;Target=ORF2726 1 222 +
Chr2	gffcl	locus	91675201	91775323	.	.	.	ID=RLOC_00019453;geneIDs=FBgn0259212.1.path1,comp154201_c0_seq1.path1,comp513287_c0_seq1.path1;transcripts=FBgn0259212.1.mrna1,comp513287_c0_seq1.mrna1,comp154201_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91675201	91775323	.	+	.	ID=FBgn0259212.1.mrna1;geneID=FBgn0259212.1.path1;Name=FBgn0259212.1;Dir=sensecoverage=100.0;identity=100.0;matches=6274;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019453
Chr2	stalkie_big_nohaplotig	exon	91675201	91675377	98	+	.	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 1 177 +
Chr2	stalkie_big_nohaplotig	exon	91675455	91675563	100	+	.	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 178 286 +
Chr2	stalkie_big_nohaplotig	exon	91675622	91675815	100	+	.	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 287 480 +
Chr2	stalkie_big_nohaplotig	exon	91677644	91678117	100	+	.	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 481 954 +
Chr2	stalkie_big_nohaplotig	exon	91678190	91678271	100	+	.	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 955 1036 +
Chr2	stalkie_big_nohaplotig	exon	91753977	91754164	100	+	.	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 1037 1224 +
Chr2	stalkie_big_nohaplotig	exon	91754330	91754494	100	+	.	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 1225 1389 +
Chr2	stalkie_big_nohaplotig	exon	91757422	91757543	100	+	.	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 1390 1511 +
Chr2	stalkie_big_nohaplotig	exon	91758957	91759011	100	+	.	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 1512 1566 +
Chr2	stalkie_big_nohaplotig	exon	91759130	91759386	100	+	.	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 1567 1823 +
Chr2	stalkie_big_nohaplotig	exon	91759763	91759960	100	+	.	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 1824 2021 +
Chr2	stalkie_big_nohaplotig	exon	91762061	91762526	100	+	.	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 2022 2487 +
Chr2	stalkie_big_nohaplotig	exon	91762639	91763163	100	+	.	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 2488 3012 +
Chr2	stalkie_big_nohaplotig	exon	91763246	91763493	100	+	.	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 3013 3260 +
Chr2	stalkie_big_nohaplotig	exon	91763549	91763667	100	+	.	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 3261 3379 +
Chr2	stalkie_big_nohaplotig	exon	91768348	91768491	100	+	.	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 3380 3523 +
Chr2	stalkie_big_nohaplotig	exon	91768698	91768845	100	+	.	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 3524 3671 +
Chr2	stalkie_big_nohaplotig	exon	91771218	91772400	100	+	.	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 3672 4854 +
Chr2	stalkie_big_nohaplotig	exon	91772479	91773591	100	+	.	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 4855 5967 +
Chr2	stalkie_big_nohaplotig	exon	91773659	91773780	100	+	.	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 5968 6089 +
Chr2	stalkie_big_nohaplotig	exon	91775137	91775323	100	+	.	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 6090 6276 +
Chr2	stalkie_big_nohaplotig	CDS	91675201	91675377	.	+	0	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 1 177 +
Chr2	stalkie_big_nohaplotig	CDS	91675455	91675563	.	+	0	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 178 286 +
Chr2	stalkie_big_nohaplotig	CDS	91675622	91675815	.	+	2	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 287 480 +
Chr2	stalkie_big_nohaplotig	CDS	91677644	91678117	.	+	0	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 481 954 +
Chr2	stalkie_big_nohaplotig	CDS	91678190	91678271	.	+	0	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 955 1036 +
Chr2	stalkie_big_nohaplotig	CDS	91753977	91754164	.	+	2	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 1037 1224 +
Chr2	stalkie_big_nohaplotig	CDS	91754330	91754494	.	+	0	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 1225 1389 +
Chr2	stalkie_big_nohaplotig	CDS	91757422	91757543	.	+	0	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 1390 1511 +
Chr2	stalkie_big_nohaplotig	CDS	91758957	91759011	.	+	1	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 1512 1566 +
Chr2	stalkie_big_nohaplotig	CDS	91759130	91759386	.	+	0	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 1567 1823 +
Chr2	stalkie_big_nohaplotig	CDS	91759763	91759960	.	+	1	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 1824 2021 +
Chr2	stalkie_big_nohaplotig	CDS	91762061	91762526	.	+	1	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 2022 2487 +
Chr2	stalkie_big_nohaplotig	CDS	91762639	91763163	.	+	0	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 2488 3012 +
Chr2	stalkie_big_nohaplotig	CDS	91763246	91763493	.	+	0	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 3013 3260 +
Chr2	stalkie_big_nohaplotig	CDS	91763549	91763667	.	+	1	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 3261 3379 +
Chr2	stalkie_big_nohaplotig	CDS	91768348	91768491	.	+	2	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 3380 3523 +
Chr2	stalkie_big_nohaplotig	CDS	91768698	91768845	.	+	2	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 3524 3671 +
Chr2	stalkie_big_nohaplotig	CDS	91771218	91772400	.	+	1	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 3672 4854 +
Chr2	stalkie_big_nohaplotig	CDS	91772479	91773591	.	+	0	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 4855 5967 +
Chr2	stalkie_big_nohaplotig	CDS	91773659	91773780	.	+	0	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 5968 6089 +
Chr2	stalkie_big_nohaplotig	CDS	91775137	91775323	.	+	1	Parent=FBgn0259212.1.mrna1;Target=FBgn0259212.1 6090 6276 +
Chr2	stalkie_big_nohaplotig	mRNA	91763647	91763870	.	-	.	ID=comp513287_c0_seq1.mrna1;geneID=comp513287_c0_seq1.path1;Name=comp513287_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=223;mismatches=1;indels=0;unknowns=0;Target=comp513287_c0_seq1 224 1 .;CDS_Target=comp513287_c0_seq1 161 39 .;locus=RLOC_00019453
Chr2	stalkie_big_nohaplotig	exon	91763647	91763870	99	-	.	Parent=comp513287_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	91763710	91763832	.	-	0	Parent=comp513287_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91774180	91775155	.	-	.	ID=comp154201_c0_seq1.mrna1;geneID=comp154201_c0_seq1.path1;Name=comp154201_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.4;matches=975;mismatches=1;indels=57;unknowns=0;Target=comp154201_c0_seq1 1033 1 .;CDS_Target=comp154201_c0_seq1 574 437 .;locus=RLOC_00019453
Chr2	stalkie_big_nohaplotig	exon	91774180	91775155	94	-	.	Parent=comp154201_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	91774582	91774719	.	-	0	Parent=comp154201_c0_seq1.mrna1
Chr2	gffcl	locus	91737558	93108758	.	+	.	ID=RLOC_00019454;geneIDs=comp137768_c0_seq1.path1,comp147939_c1_seq1.path1;transcripts=comp137768_c0_seq1.mrna1,comp147939_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91737558	93108758	.	+	.	ID=comp137768_c0_seq1.mrna1;geneID=comp137768_c0_seq1.path1;Name=comp137768_c0_seq1;Dir=indeterminatecoverage=97.6;identity=99.7;matches=321;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019454
Chr2	stalkie_big_nohaplotig	exon	91737558	91737572	100	+	.	Parent=comp137768_c0_seq1.mrna1;Target=comp137768_c0_seq1 23 9 .
Chr2	stalkie_big_nohaplotig	exon	91742422	91742426	100	+	.	Parent=comp137768_c0_seq1.mrna1;Target=comp137768_c0_seq1 28 24 .
Chr2	stalkie_big_nohaplotig	exon	91781298	91781300	100	+	.	Parent=comp137768_c0_seq1.mrna1;Target=comp137768_c0_seq1 31 29 .
Chr2	stalkie_big_nohaplotig	exon	91809484	91809498	100	+	.	Parent=comp137768_c0_seq1.mrna1;Target=comp137768_c0_seq1 46 32 .
Chr2	stalkie_big_nohaplotig	exon	91814721	91814723	100	+	.	Parent=comp137768_c0_seq1.mrna1;Target=comp137768_c0_seq1 49 47 .
Chr2	stalkie_big_nohaplotig	exon	91827240	91827241	100	+	.	Parent=comp137768_c0_seq1.mrna1;Target=comp137768_c0_seq1 51 50 .
Chr2	stalkie_big_nohaplotig	exon	91835709	91835718	100	+	.	Parent=comp137768_c0_seq1.mrna1;Target=comp137768_c0_seq1 61 52 .
Chr2	stalkie_big_nohaplotig	exon	93108490	93108758	99	+	.	Parent=comp137768_c0_seq1.mrna1;Target=comp137768_c0_seq1 330 62 .
Chr2	stalkie_big_nohaplotig	CDS	91737560	91737572	.	+	0	Parent=comp137768_c0_seq1.mrna1;Target=comp137768_c0_seq1 23 11 .
Chr2	stalkie_big_nohaplotig	CDS	91742422	91742426	.	+	2	Parent=comp137768_c0_seq1.mrna1;Target=comp137768_c0_seq1 28 24 .
Chr2	stalkie_big_nohaplotig	CDS	91781298	91781300	.	+	0	Parent=comp137768_c0_seq1.mrna1;Target=comp137768_c0_seq1 31 29 .
Chr2	stalkie_big_nohaplotig	CDS	91809484	91809498	.	+	0	Parent=comp137768_c0_seq1.mrna1;Target=comp137768_c0_seq1 46 32 .
Chr2	stalkie_big_nohaplotig	CDS	91814721	91814723	.	+	0	Parent=comp137768_c0_seq1.mrna1;Target=comp137768_c0_seq1 49 47 .
Chr2	stalkie_big_nohaplotig	CDS	91827240	91827241	.	+	0	Parent=comp137768_c0_seq1.mrna1;Target=comp137768_c0_seq1 51 50 .
Chr2	stalkie_big_nohaplotig	CDS	91835709	91835718	.	+	1	Parent=comp137768_c0_seq1.mrna1;Target=comp137768_c0_seq1 61 52 .
Chr2	stalkie_big_nohaplotig	CDS	93108490	93108498	.	+	0	Parent=comp137768_c0_seq1.mrna1;Target=comp137768_c0_seq1 70 62 .
Chr2	stalkie_big_nohaplotig	mRNA	91835304	91835964	.	+	.	ID=comp147939_c1_seq1.mrna1;geneID=comp147939_c1_seq1.path1;Name=comp147939_c1_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=661;mismatches=0;indels=0;unknowns=0;Target=comp147939_c1_seq1 661 1 .;CDS_Target=comp147939_c1_seq1 129 1 .;locus=RLOC_00019454
Chr2	stalkie_big_nohaplotig	exon	91835304	91835964	100	+	.	Parent=comp147939_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	91835304	91835432	.	+	0	Parent=comp147939_c1_seq1.mrna1
Chr2	gffcl	locus	91779637	91781115	.	-	.	ID=RLOC_00019455;geneIDs=FBgn0037293.1.path1;transcripts=FBgn0037293.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91779637	91781115	.	-	.	ID=FBgn0037293.1.mrna1;geneID=FBgn0037293.1.path1;Name=FBgn0037293.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1479;mismatches=0;indels=0;unknowns=0;Target=FBgn0037293.1 1479 1 .;locus=RLOC_00019455
Chr2	stalkie_big_nohaplotig	exon	91779637	91781115	100	-	.	Parent=FBgn0037293.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	91779637	91781115	.	-	0	Parent=FBgn0037293.1.mrna1
Chr2	gffcl	locus	91782726	91783239	.	-	.	ID=RLOC_00019456;geneIDs=FBgn0037715.1.path1;transcripts=FBgn0037715.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91782726	91783239	.	-	.	ID=FBgn0037715.1.mrna1;geneID=FBgn0037715.1.path1;Name=FBgn0037715.1;Dir=sensecoverage=100.0;identity=100.0;matches=372;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019456
Chr2	stalkie_big_nohaplotig	exon	91782726	91782956	100	-	.	Parent=FBgn0037715.1.mrna1;Target=FBgn0037715.1 142 372 +
Chr2	stalkie_big_nohaplotig	exon	91783018	91783058	100	-	.	Parent=FBgn0037715.1.mrna1;Target=FBgn0037715.1 101 141 +
Chr2	stalkie_big_nohaplotig	exon	91783140	91783239	100	-	.	Parent=FBgn0037715.1.mrna1;Target=FBgn0037715.1 1 100 +
Chr2	stalkie_big_nohaplotig	CDS	91782726	91782956	.	-	0	Parent=FBgn0037715.1.mrna1;Target=FBgn0037715.1 142 372 +
Chr2	stalkie_big_nohaplotig	CDS	91783018	91783058	.	-	2	Parent=FBgn0037715.1.mrna1;Target=FBgn0037715.1 101 141 +
Chr2	stalkie_big_nohaplotig	CDS	91783140	91783239	.	-	0	Parent=FBgn0037715.1.mrna1;Target=FBgn0037715.1 1 100 +
Chr2	gffcl	locus	91787028	91789351	.	-	.	ID=RLOC_00019457;geneIDs=FBgn0027338.2.path1;transcripts=FBgn0027338.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91787028	91789351	.	-	.	ID=FBgn0027338.2.mrna1;geneID=FBgn0027338.2.path1;Name=FBgn0027338.2;Dir=sensecoverage=100.0;identity=100.0;matches=1593;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019457
Chr2	stalkie_big_nohaplotig	exon	91787028	91787117	100	-	.	Parent=FBgn0027338.2.mrna1;Target=FBgn0027338.2 1504 1593 +
Chr2	stalkie_big_nohaplotig	exon	91787180	91787356	100	-	.	Parent=FBgn0027338.2.mrna1;Target=FBgn0027338.2 1327 1503 +
Chr2	stalkie_big_nohaplotig	exon	91787572	91788402	100	-	.	Parent=FBgn0027338.2.mrna1;Target=FBgn0027338.2 496 1326 +
Chr2	stalkie_big_nohaplotig	exon	91788459	91788839	100	-	.	Parent=FBgn0027338.2.mrna1;Target=FBgn0027338.2 115 495 +
Chr2	stalkie_big_nohaplotig	exon	91789238	91789351	100	-	.	Parent=FBgn0027338.2.mrna1;Target=FBgn0027338.2 1 114 +
Chr2	stalkie_big_nohaplotig	CDS	91787028	91787117	.	-	0	Parent=FBgn0027338.2.mrna1;Target=FBgn0027338.2 1504 1593 +
Chr2	stalkie_big_nohaplotig	CDS	91787180	91787356	.	-	0	Parent=FBgn0027338.2.mrna1;Target=FBgn0027338.2 1327 1503 +
Chr2	stalkie_big_nohaplotig	CDS	91787572	91788402	.	-	0	Parent=FBgn0027338.2.mrna1;Target=FBgn0027338.2 496 1326 +
Chr2	stalkie_big_nohaplotig	CDS	91788459	91788839	.	-	0	Parent=FBgn0027338.2.mrna1;Target=FBgn0027338.2 115 495 +
Chr2	stalkie_big_nohaplotig	CDS	91789238	91789351	.	-	0	Parent=FBgn0027338.2.mrna1;Target=FBgn0027338.2 1 114 +
Chr2	gffcl	locus	91791993	91794390	.	+	.	ID=RLOC_00019458;geneIDs=FBgn0037716.1.path1;transcripts=FBgn0037716.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91791993	91794390	.	+	.	ID=FBgn0037716.1.mrna1;geneID=FBgn0037716.1.path1;Name=FBgn0037716.1;Dir=sensecoverage=99.4;identity=99.9;matches=2334;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019458
Chr2	stalkie_big_nohaplotig	exon	91791993	91793957	99	+	.	Parent=FBgn0037716.1.mrna1;Target=FBgn0037716.1 1 1965 +
Chr2	stalkie_big_nohaplotig	exon	91794020	91794390	100	+	.	Parent=FBgn0037716.1.mrna1;Target=FBgn0037716.1 1966 2336 +
Chr2	stalkie_big_nohaplotig	CDS	91791993	91793957	.	+	0	Parent=FBgn0037716.1.mrna1;Target=FBgn0037716.1 1 1965 +
Chr2	stalkie_big_nohaplotig	CDS	91794020	91794388	.	+	0	Parent=FBgn0037716.1.mrna1;Target=FBgn0037716.1 1966 2334 +
Chr2	gffcl	locus	91798718	91805537	.	+	.	ID=RLOC_00019459;geneIDs=FBgn0037717.4.path1;transcripts=FBgn0037717.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91798718	91805537	.	+	.	ID=FBgn0037717.4.mrna1;geneID=FBgn0037717.4.path1;Name=FBgn0037717.4;Dir=sensecoverage=100.0;identity=100.0;matches=2076;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019459
Chr2	stalkie_big_nohaplotig	exon	91798718	91798870	100	+	.	Parent=FBgn0037717.4.mrna1;Target=FBgn0037717.4 1 153 +
Chr2	stalkie_big_nohaplotig	exon	91800758	91801871	100	+	.	Parent=FBgn0037717.4.mrna1;Target=FBgn0037717.4 154 1267 +
Chr2	stalkie_big_nohaplotig	exon	91804162	91804248	100	+	.	Parent=FBgn0037717.4.mrna1;Target=FBgn0037717.4 1268 1354 +
Chr2	stalkie_big_nohaplotig	exon	91804660	91805151	100	+	.	Parent=FBgn0037717.4.mrna1;Target=FBgn0037717.4 1355 1846 +
Chr2	stalkie_big_nohaplotig	exon	91805215	91805364	100	+	.	Parent=FBgn0037717.4.mrna1;Target=FBgn0037717.4 1847 1996 +
Chr2	stalkie_big_nohaplotig	exon	91805458	91805537	100	+	.	Parent=FBgn0037717.4.mrna1;Target=FBgn0037717.4 1997 2076 +
Chr2	stalkie_big_nohaplotig	CDS	91798718	91798870	.	+	0	Parent=FBgn0037717.4.mrna1;Target=FBgn0037717.4 1 153 +
Chr2	stalkie_big_nohaplotig	CDS	91800758	91801871	.	+	0	Parent=FBgn0037717.4.mrna1;Target=FBgn0037717.4 154 1267 +
Chr2	stalkie_big_nohaplotig	CDS	91804162	91804248	.	+	2	Parent=FBgn0037717.4.mrna1;Target=FBgn0037717.4 1268 1354 +
Chr2	stalkie_big_nohaplotig	CDS	91804660	91805151	.	+	2	Parent=FBgn0037717.4.mrna1;Target=FBgn0037717.4 1355 1846 +
Chr2	stalkie_big_nohaplotig	CDS	91805215	91805364	.	+	2	Parent=FBgn0037717.4.mrna1;Target=FBgn0037717.4 1847 1996 +
Chr2	stalkie_big_nohaplotig	CDS	91805458	91805537	.	+	2	Parent=FBgn0037717.4.mrna1;Target=FBgn0037717.4 1997 2076 +
Chr2	gffcl	locus	91809279	91812997	.	+	.	ID=RLOC_00019460;geneIDs=FBgn0037718.1.path1;transcripts=FBgn0037718.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91809279	91812997	.	+	.	ID=FBgn0037718.1.mrna1;geneID=FBgn0037718.1.path1;Name=FBgn0037718.1;Dir=sensecoverage=100.0;identity=100.0;matches=1506;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019460
Chr2	stalkie_big_nohaplotig	exon	91809279	91809390	100	+	.	Parent=FBgn0037718.1.mrna1;Target=FBgn0037718.1 1 112 +
Chr2	stalkie_big_nohaplotig	exon	91809581	91809694	100	+	.	Parent=FBgn0037718.1.mrna1;Target=FBgn0037718.1 113 226 +
Chr2	stalkie_big_nohaplotig	exon	91809784	91809983	100	+	.	Parent=FBgn0037718.1.mrna1;Target=FBgn0037718.1 227 426 +
Chr2	stalkie_big_nohaplotig	exon	91811853	91812811	100	+	.	Parent=FBgn0037718.1.mrna1;Target=FBgn0037718.1 427 1385 +
Chr2	stalkie_big_nohaplotig	exon	91812877	91812997	100	+	.	Parent=FBgn0037718.1.mrna1;Target=FBgn0037718.1 1386 1506 +
Chr2	stalkie_big_nohaplotig	CDS	91809279	91809390	.	+	0	Parent=FBgn0037718.1.mrna1;Target=FBgn0037718.1 1 112 +
Chr2	stalkie_big_nohaplotig	CDS	91809581	91809694	.	+	2	Parent=FBgn0037718.1.mrna1;Target=FBgn0037718.1 113 226 +
Chr2	stalkie_big_nohaplotig	CDS	91809784	91809983	.	+	2	Parent=FBgn0037718.1.mrna1;Target=FBgn0037718.1 227 426 +
Chr2	stalkie_big_nohaplotig	CDS	91811853	91812811	.	+	0	Parent=FBgn0037718.1.mrna1;Target=FBgn0037718.1 427 1385 +
Chr2	stalkie_big_nohaplotig	CDS	91812877	91812997	.	+	1	Parent=FBgn0037718.1.mrna1;Target=FBgn0037718.1 1386 1506 +
Chr2	gffcl	locus	91816065	91817422	.	-	.	ID=RLOC_00019461;geneIDs=ORF897.path1;transcripts=ORF897.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91816065	91817422	.	-	.	ID=ORF897.mrna1;geneID=ORF897.path1;Name=ORF897;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1358;mismatches=0;indels=1;unknowns=0;Target=ORF897 1359 1 .;CDS_Target=ORF897 74 3 .;locus=RLOC_00019461
Chr2	stalkie_big_nohaplotig	exon	91816065	91817422	99	-	.	Parent=ORF897.mrna1
Chr2	stalkie_big_nohaplotig	CDS	91817350	91817420	.	-	0	Parent=ORF897.mrna1
Chr2	gffcl	locus	91864112	91870744	.	+	.	ID=RLOC_00019462;geneIDs=FBgn0038535.1.path1;transcripts=FBgn0038535.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91864112	91870744	.	+	.	ID=FBgn0038535.1.mrna1;geneID=FBgn0038535.1.path1;Name=FBgn0038535.1;Dir=sensecoverage=99.1;identity=99.5;matches=2743;mismatches=13;indels=0;unknowns=0;locus=RLOC_00019462
Chr2	stalkie_big_nohaplotig	exon	91864112	91866140	99	+	.	Parent=FBgn0038535.1.mrna1;Target=FBgn0038535.1 21 2049 +
Chr2	stalkie_big_nohaplotig	exon	91868702	91868803	100	+	.	Parent=FBgn0038535.1.mrna1;Target=FBgn0038535.1 2050 2151 +
Chr2	stalkie_big_nohaplotig	exon	91868920	91869426	100	+	.	Parent=FBgn0038535.1.mrna1;Target=FBgn0038535.1 2152 2658 +
Chr2	stalkie_big_nohaplotig	exon	91870627	91870744	100	+	.	Parent=FBgn0038535.1.mrna1;Target=FBgn0038535.1 2659 2776 +
Chr2	stalkie_big_nohaplotig	CDS	91864113	91866140	.	+	0	Parent=FBgn0038535.1.mrna1;Target=FBgn0038535.1 22 2049 +
Chr2	stalkie_big_nohaplotig	CDS	91868702	91868803	.	+	0	Parent=FBgn0038535.1.mrna1;Target=FBgn0038535.1 2050 2151 +
Chr2	stalkie_big_nohaplotig	CDS	91868920	91869426	.	+	0	Parent=FBgn0038535.1.mrna1;Target=FBgn0038535.1 2152 2658 +
Chr2	stalkie_big_nohaplotig	CDS	91870627	91870743	.	+	0	Parent=FBgn0038535.1.mrna1;Target=FBgn0038535.1 2659 2775 +
Chr2	gffcl	locus	91874250	91877655	.	-	.	ID=RLOC_00019463;geneIDs=FBgn0000063.1.path1;transcripts=FBgn0000063.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91874250	91877655	.	-	.	ID=FBgn0000063.1.mrna1;geneID=FBgn0000063.1.path1;Name=FBgn0000063.1;Dir=sensecoverage=100.0;identity=99.9;matches=1355;mismatches=0;indels=1;unknowns=0;Target=FBgn0000063.1 3 143 +;locus=RLOC_00019463
Chr2	stalkie_big_nohaplotig	exon	91874250	91874369	100	-	.	Parent=FBgn0000063.1.mrna1;Target=FBgn0000063.1 1237 1356 +
Chr2	stalkie_big_nohaplotig	exon	91874436	91874612	100	-	.	Parent=FBgn0000063.1.mrna1;Target=FBgn0000063.1 1060 1236 +
Chr2	stalkie_big_nohaplotig	exon	91876420	91876634	100	-	.	Parent=FBgn0000063.1.mrna1;Target=FBgn0000063.1 845 1059 +
Chr2	stalkie_big_nohaplotig	exon	91876696	91876856	100	-	.	Parent=FBgn0000063.1.mrna1;Target=FBgn0000063.1 684 844 +
Chr2	stalkie_big_nohaplotig	exon	91876916	91877022	100	-	.	Parent=FBgn0000063.1.mrna1;Target=FBgn0000063.1 577 683 +
Chr2	stalkie_big_nohaplotig	exon	91877081	91877655	99	-	.	Parent=FBgn0000063.1.mrna1;Target=FBgn0000063.1 1 576 +
Chr2	stalkie_big_nohaplotig	CDS	91877514	91877653	.	-	0	Parent=FBgn0000063.1.mrna1
Chr2	gffcl	locus	91881587	91885708	.	+	.	ID=RLOC_00019464;geneIDs=FBgn0038533.1.path1;transcripts=FBgn0038533.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	91881587	91885708	.	+	.	ID=FBgn0038533.1.mrna1;geneID=FBgn0038533.1.path1;Name=FBgn0038533.1;Dir=sensecoverage=100.0;identity=99.9;matches=800;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019464
Chr2	stalkie_big_nohaplotig	exon	91881587	91881756	100	+	.	Parent=FBgn0038533.1.mrna1;Target=FBgn0038533.1 1 170 +
Chr2	stalkie_big_nohaplotig	exon	91883398	91883530	100	+	.	Parent=FBgn0038533.1.mrna1;Target=FBgn0038533.1 171 303 +
Chr2	stalkie_big_nohaplotig	exon	91883594	91883870	99	+	.	Parent=FBgn0038533.1.mrna1;Target=FBgn0038533.1 304 580 +
Chr2	stalkie_big_nohaplotig	exon	91883937	91884061	100	+	.	Parent=FBgn0038533.1.mrna1;Target=FBgn0038533.1 581 705 +
Chr2	stalkie_big_nohaplotig	exon	91885613	91885708	100	+	.	Parent=FBgn0038533.1.mrna1;Target=FBgn0038533.1 706 801 +
Chr2	stalkie_big_nohaplotig	CDS	91881587	91881756	.	+	0	Parent=FBgn0038533.1.mrna1;Target=FBgn0038533.1 1 170 +
Chr2	stalkie_big_nohaplotig	CDS	91883398	91883530	.	+	1	Parent=FBgn0038533.1.mrna1;Target=FBgn0038533.1 171 303 +
Chr2	stalkie_big_nohaplotig	CDS	91883594	91883870	.	+	0	Parent=FBgn0038533.1.mrna1;Target=FBgn0038533.1 304 580 +
Chr2	stalkie_big_nohaplotig	CDS	91883937	91884061	.	+	2	Parent=FBgn0038533.1.mrna1;Target=FBgn0038533.1 581 705 +
Chr2	stalkie_big_nohaplotig	CDS	91885613	91885708	.	+	0	Parent=FBgn0038533.1.mrna1;Target=FBgn0038533.1 706 801 +
Chr2	gffcl	locus	92033698	92034349	.	-	.	ID=RLOC_00019466;geneIDs=FBgn0038530.1.path1;transcripts=FBgn0038530.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92033698	92034349	.	-	.	ID=FBgn0038530.1.mrna1;geneID=FBgn0038530.1.path1;Name=FBgn0038530.1;Dir=sensecoverage=100.0;identity=100.0;matches=585;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019466
Chr2	stalkie_big_nohaplotig	exon	92033698	92034094	100	-	.	Parent=FBgn0038530.1.mrna1;Target=FBgn0038530.1 189 585 +
Chr2	stalkie_big_nohaplotig	exon	92034162	92034349	100	-	.	Parent=FBgn0038530.1.mrna1;Target=FBgn0038530.1 1 188 +
Chr2	stalkie_big_nohaplotig	CDS	92033698	92034094	.	-	1	Parent=FBgn0038530.1.mrna1;Target=FBgn0038530.1 189 585 +
Chr2	stalkie_big_nohaplotig	CDS	92034162	92034349	.	-	0	Parent=FBgn0038530.1.mrna1;Target=FBgn0038530.1 1 188 +
Chr2	gffcl	locus	92061990	92062629	.	-	.	ID=RLOC_00019467;geneIDs=comp118108_c0_seq1.path1;transcripts=comp118108_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92061990	92062629	.	-	.	ID=comp118108_c0_seq1.mrna1;geneID=comp118108_c0_seq1.path1;Name=comp118108_c0_seq1;Dir=sensecoverage=98.9;identity=100.0;matches=560;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019467
Chr2	stalkie_big_nohaplotig	exon	92061990	92062371	100	-	.	Parent=comp118108_c0_seq1.mrna1;Target=comp118108_c0_seq1 185 566 +
Chr2	stalkie_big_nohaplotig	exon	92062452	92062629	100	-	.	Parent=comp118108_c0_seq1.mrna1;Target=comp118108_c0_seq1 7 184 +
Chr2	stalkie_big_nohaplotig	CDS	92062102	92062371	.	-	0	Parent=comp118108_c0_seq1.mrna1;Target=comp118108_c0_seq1 185 454 +
Chr2	stalkie_big_nohaplotig	CDS	92062452	92062463	.	-	0	Parent=comp118108_c0_seq1.mrna1;Target=comp118108_c0_seq1 173 184 +
Chr2	gffcl	locus	92083417	92084165	.	+	.	ID=RLOC_00019468;geneIDs=comp142468_c0_seq1.path1;transcripts=comp142468_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92083417	92084165	.	+	.	ID=comp142468_c0_seq1.mrna1;geneID=comp142468_c0_seq1.path1;Name=comp142468_c0_seq1;Dir=sensecoverage=92.9;identity=98.7;matches=622;mismatches=2;indels=6;unknowns=0;locus=RLOC_00019468
Chr2	stalkie_big_nohaplotig	exon	92083417	92083487	100	+	.	Parent=comp142468_c0_seq1.mrna1;Target=comp142468_c0_seq1 1 71 +
Chr2	stalkie_big_nohaplotig	exon	92083613	92084165	98	+	.	Parent=comp142468_c0_seq1.mrna1;Target=comp142468_c0_seq1 72 630 +
Chr2	stalkie_big_nohaplotig	CDS	92083476	92083487	.	+	0	Parent=comp142468_c0_seq1.mrna1;Target=comp142468_c0_seq1 60 71 +
Chr2	stalkie_big_nohaplotig	CDS	92083613	92084053	.	+	0	Parent=comp142468_c0_seq1.mrna1;Target=comp142468_c0_seq1 72 518 +
Chr2	gffcl	locus	92089098	92089507	.	-	.	ID=RLOC_00019469;geneIDs=comp157370_c0_seq1.path1;transcripts=comp157370_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92089098	92089507	.	-	.	ID=comp157370_c0_seq1.mrna1;geneID=comp157370_c0_seq1.path1;Name=comp157370_c0_seq1;Dir=indeterminatecoverage=12.8;identity=99.3;matches=407;mismatches=3;indels=0;unknowns=0;Target=comp157370_c0_seq1 410 1 .;CDS_Target=comp157370_c0_seq1 90 1 .;locus=RLOC_00019469
Chr2	stalkie_big_nohaplotig	exon	92089098	92089507	99	-	.	Parent=comp157370_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	92089418	92089507	.	-	0	Parent=comp157370_c0_seq1.mrna1
Chr2	gffcl	locus	92096559	92100041	.	+	.	ID=RLOC_00019470;geneIDs=FBgn0038524.1.path1;transcripts=FBgn0038524.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92096559	92100041	.	+	.	ID=FBgn0038524.1.mrna1;geneID=FBgn0038524.1.path1;Name=FBgn0038524.1;Dir=sensecoverage=99.9;identity=99.7;matches=1461;mismatches=5;indels=0;unknowns=0;locus=RLOC_00019470
Chr2	stalkie_big_nohaplotig	exon	92096559	92096649	100	+	.	Parent=FBgn0038524.1.mrna1;Target=FBgn0038524.1 2 92 +
Chr2	stalkie_big_nohaplotig	exon	92096724	92096956	100	+	.	Parent=FBgn0038524.1.mrna1;Target=FBgn0038524.1 93 325 +
Chr2	stalkie_big_nohaplotig	exon	92097017	92097864	99	+	.	Parent=FBgn0038524.1.mrna1;Target=FBgn0038524.1 326 1173 +
Chr2	stalkie_big_nohaplotig	exon	92097928	92098053	100	+	.	Parent=FBgn0038524.1.mrna1;Target=FBgn0038524.1 1174 1299 +
Chr2	stalkie_big_nohaplotig	exon	92099874	92100041	100	+	.	Parent=FBgn0038524.1.mrna1;Target=FBgn0038524.1 1300 1467 +
Chr2	stalkie_big_nohaplotig	CDS	92096561	92096649	.	+	0	Parent=FBgn0038524.1.mrna1;Target=FBgn0038524.1 4 92 +
Chr2	stalkie_big_nohaplotig	CDS	92096724	92096956	.	+	1	Parent=FBgn0038524.1.mrna1;Target=FBgn0038524.1 93 325 +
Chr2	stalkie_big_nohaplotig	CDS	92097017	92097864	.	+	2	Parent=FBgn0038524.1.mrna1;Target=FBgn0038524.1 326 1173 +
Chr2	stalkie_big_nohaplotig	CDS	92097928	92098053	.	+	0	Parent=FBgn0038524.1.mrna1;Target=FBgn0038524.1 1174 1299 +
Chr2	stalkie_big_nohaplotig	CDS	92099874	92100041	.	+	0	Parent=FBgn0038524.1.mrna1;Target=FBgn0038524.1 1300 1467 +
Chr2	gffcl	locus	92100588	92101440	.	-	.	ID=RLOC_00019471;geneIDs=comp160138_c0_seq1.path1;transcripts=comp160138_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92100588	92101440	.	-	.	ID=comp160138_c0_seq1.mrna1;geneID=comp160138_c0_seq1.path1;Name=comp160138_c0_seq1;Dir=indeterminatecoverage=99.0;identity=98.8;matches=843;mismatches=10;indels=0;unknowns=0;Target=comp160138_c0_seq1 853 1 .;CDS_Target=comp160138_c0_seq1 587 528 .;locus=RLOC_00019471
Chr2	stalkie_big_nohaplotig	exon	92100588	92101440	98	-	.	Parent=comp160138_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	92100854	92100913	.	-	0	Parent=comp160138_c0_seq1.mrna1
Chr2	gffcl	locus	92150035	92174365	.	-	.	ID=RLOC_00019472;geneIDs=FBgn0087012.1.path1;transcripts=FBgn0087012.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92150035	92174365	.	-	.	ID=FBgn0087012.1.mrna1;geneID=FBgn0087012.1.path1;Name=FBgn0087012.1;Dir=sensecoverage=100.0;identity=99.9;matches=1708;mismatches=1;indels=1;unknowns=0;locus=RLOC_00019472
Chr2	stalkie_big_nohaplotig	exon	92150035	92150218	99	-	.	Parent=FBgn0087012.1.mrna1;Target=FBgn0087012.1 1526 1710 +
Chr2	stalkie_big_nohaplotig	exon	92150379	92150603	100	-	.	Parent=FBgn0087012.1.mrna1;Target=FBgn0087012.1 1301 1525 +
Chr2	stalkie_big_nohaplotig	exon	92173066	92174365	99	-	.	Parent=FBgn0087012.1.mrna1;Target=FBgn0087012.1 1 1300 +
Chr2	stalkie_big_nohaplotig	CDS	92150035	92150218	.	-	2	Parent=FBgn0087012.1.mrna1;Target=FBgn0087012.1 1526 1710 +
Chr2	stalkie_big_nohaplotig	CDS	92150379	92150603	.	-	2	Parent=FBgn0087012.1.mrna1;Target=FBgn0087012.1 1301 1525 +
Chr2	stalkie_big_nohaplotig	CDS	92173066	92174365	.	-	0	Parent=FBgn0087012.1.mrna1;Target=FBgn0087012.1 1 1300 +
Chr2	gffcl	locus	92170093	92171606	.	+	.	ID=RLOC_00019473;geneIDs=comp163503_c1_seq1.path1;transcripts=comp163503_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92170093	92171606	.	+	.	ID=comp163503_c1_seq1.mrna1;geneID=comp163503_c1_seq1.path1;Name=comp163503_c1_seq1;Dir=sensecoverage=85.3;identity=99.8;matches=1077;mismatches=2;indels=0;unknowns=0;Target=comp163503_c1_seq1 466 585 +;locus=RLOC_00019473
Chr2	stalkie_big_nohaplotig	exon	92170093	92170314	99	+	.	Parent=comp163503_c1_seq1.mrna1;Target=comp163503_c1_seq1 1 222 +
Chr2	stalkie_big_nohaplotig	exon	92170655	92171111	100	+	.	Parent=comp163503_c1_seq1.mrna1;Target=comp163503_c1_seq1 223 679 +
Chr2	stalkie_big_nohaplotig	exon	92171207	92171606	100	+	.	Parent=comp163503_c1_seq1.mrna1;Target=comp163503_c1_seq1 680 1079 +
Chr2	stalkie_big_nohaplotig	CDS	92170898	92171017	.	+	0	Parent=comp163503_c1_seq1.mrna1
Chr2	gffcl	locus	92278535	92279256	.	-	.	ID=RLOC_00019475;geneIDs=comp116955_c0_seq1.path1;transcripts=comp116955_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92278535	92279256	.	-	.	ID=comp116955_c0_seq1.mrna1;geneID=comp116955_c0_seq1.path1;Name=comp116955_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=717;mismatches=5;indels=1;unknowns=0;Target=comp116955_c0_seq1 723 1 .;CDS_Target=comp116955_c0_seq1 300 220 .;locus=RLOC_00019475
Chr2	stalkie_big_nohaplotig	exon	92278535	92279256	99	-	.	Parent=comp116955_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	92278958	92279037	.	-	0	Parent=comp116955_c0_seq1.mrna1
Chr2	gffcl	locus	92303824	92305780	.	+	.	ID=RLOC_00019476;geneIDs=FBgn0032235.1.path1;transcripts=FBgn0032235.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92303824	92305780	.	+	.	ID=FBgn0032235.1.mrna1;geneID=FBgn0032235.1.path1;Name=FBgn0032235.1;Dir=sensecoverage=100.0;identity=99.4;matches=1378;mismatches=7;indels=1;unknowns=0;Target=FBgn0032235.1 3 110 +;locus=RLOC_00019476
Chr2	stalkie_big_nohaplotig	exon	92303824	92304362	99	+	.	Parent=FBgn0032235.1.mrna1;Target=FBgn0032235.1 1 540 +
Chr2	stalkie_big_nohaplotig	exon	92304423	92304610	100	+	.	Parent=FBgn0032235.1.mrna1;Target=FBgn0032235.1 541 728 +
Chr2	stalkie_big_nohaplotig	exon	92304993	92305087	100	+	.	Parent=FBgn0032235.1.mrna1;Target=FBgn0032235.1 729 823 +
Chr2	stalkie_big_nohaplotig	exon	92305154	92305266	100	+	.	Parent=FBgn0032235.1.mrna1;Target=FBgn0032235.1 824 936 +
Chr2	stalkie_big_nohaplotig	exon	92305331	92305780	98	+	.	Parent=FBgn0032235.1.mrna1;Target=FBgn0032235.1 937 1386 +
Chr2	stalkie_big_nohaplotig	CDS	92303826	92303932	.	+	0	Parent=FBgn0032235.1.mrna1
Chr2	gffcl	locus	92467510	92467900	.	+	.	ID=RLOC_00019477;geneIDs=comp152582_c0_seq1.path1;transcripts=comp152582_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92467510	92467900	.	+	.	ID=comp152582_c0_seq1.mrna1;geneID=comp152582_c0_seq1.path1;Name=comp152582_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=387;mismatches=3;indels=1;unknowns=0;Target=comp152582_c0_seq1 390 1 .;CDS_Target=comp152582_c0_seq1 108 1 .;locus=RLOC_00019477
Chr2	stalkie_big_nohaplotig	exon	92467510	92467900	98	+	.	Parent=comp152582_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	92467510	92467617	.	+	0	Parent=comp152582_c0_seq1.mrna1
Chr2	gffcl	locus	92477767	92479291	.	-	.	ID=RLOC_00019478;geneIDs=comp147278_c0_seq1.path1;transcripts=comp147278_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92477767	92479291	.	-	.	ID=comp147278_c0_seq1.mrna1;geneID=comp147278_c0_seq1.path1;Name=comp147278_c0_seq1;Dir=antisensecoverage=99.9;identity=97.2;matches=1375;mismatches=27;indels=13;unknowns=0;Target=comp147278_c0_seq1 235 360 .;locus=RLOC_00019478
Chr2	stalkie_big_nohaplotig	exon	92477767	92478884	97	-	.	Parent=comp147278_c0_seq1.mrna1;Target=comp147278_c0_seq1 2 1122 -
Chr2	stalkie_big_nohaplotig	exon	92478944	92479025	97	-	.	Parent=comp147278_c0_seq1.mrna1;Target=comp147278_c0_seq1 1123 1204 -
Chr2	stalkie_big_nohaplotig	exon	92479087	92479291	97	-	.	Parent=comp147278_c0_seq1.mrna1;Target=comp147278_c0_seq1 1205 1413 -
Chr2	stalkie_big_nohaplotig	CDS	92478000	92478125	.	-	0	Parent=comp147278_c0_seq1.mrna1
Chr2	gffcl	locus	92480416	92482107	.	+	.	ID=RLOC_00019479;geneIDs=FBgn0051798.1.path1;transcripts=FBgn0051798.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92480416	92482107	.	+	.	ID=FBgn0051798.1.mrna1;geneID=FBgn0051798.1.path1;Name=FBgn0051798.1;Dir=sensecoverage=100.0;identity=99.8;matches=1452;mismatches=3;indels=0;unknowns=0;locus=RLOC_00019479
Chr2	stalkie_big_nohaplotig	exon	92480416	92480977	99	+	.	Parent=FBgn0051798.1.mrna1;Target=FBgn0051798.1 1 562 +
Chr2	stalkie_big_nohaplotig	exon	92481036	92481266	100	+	.	Parent=FBgn0051798.1.mrna1;Target=FBgn0051798.1 563 793 +
Chr2	stalkie_big_nohaplotig	exon	92481328	92481523	100	+	.	Parent=FBgn0051798.1.mrna1;Target=FBgn0051798.1 794 989 +
Chr2	stalkie_big_nohaplotig	exon	92481642	92482107	100	+	.	Parent=FBgn0051798.1.mrna1;Target=FBgn0051798.1 990 1455 +
Chr2	stalkie_big_nohaplotig	CDS	92480416	92480977	.	+	0	Parent=FBgn0051798.1.mrna1;Target=FBgn0051798.1 1 562 +
Chr2	stalkie_big_nohaplotig	CDS	92481036	92481266	.	+	2	Parent=FBgn0051798.1.mrna1;Target=FBgn0051798.1 563 793 +
Chr2	stalkie_big_nohaplotig	CDS	92481328	92481523	.	+	2	Parent=FBgn0051798.1.mrna1;Target=FBgn0051798.1 794 989 +
Chr2	stalkie_big_nohaplotig	CDS	92481642	92482107	.	+	1	Parent=FBgn0051798.1.mrna1;Target=FBgn0051798.1 990 1455 +
Chr2	gffcl	locus	92485473	92490194	.	+	.	ID=RLOC_00019480;geneIDs=FBgn0037482.1.path1;transcripts=FBgn0037482.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92485473	92490194	.	+	.	ID=FBgn0037482.1.mrna1;geneID=FBgn0037482.1.path1;Name=FBgn0037482.1;Dir=sensecoverage=100.0;identity=99.9;matches=1840;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019480
Chr2	stalkie_big_nohaplotig	exon	92485473	92485660	100	+	.	Parent=FBgn0037482.1.mrna1;Target=FBgn0037482.1 1 188 +
Chr2	stalkie_big_nohaplotig	exon	92485714	92486008	99	+	.	Parent=FBgn0037482.1.mrna1;Target=FBgn0037482.1 189 483 +
Chr2	stalkie_big_nohaplotig	exon	92486070	92486253	100	+	.	Parent=FBgn0037482.1.mrna1;Target=FBgn0037482.1 484 667 +
Chr2	stalkie_big_nohaplotig	exon	92488951	92489083	100	+	.	Parent=FBgn0037482.1.mrna1;Target=FBgn0037482.1 668 800 +
Chr2	stalkie_big_nohaplotig	exon	92489153	92490194	99	+	.	Parent=FBgn0037482.1.mrna1;Target=FBgn0037482.1 801 1842 +
Chr2	stalkie_big_nohaplotig	CDS	92485473	92485660	.	+	0	Parent=FBgn0037482.1.mrna1;Target=FBgn0037482.1 1 188 +
Chr2	stalkie_big_nohaplotig	CDS	92485714	92486008	.	+	1	Parent=FBgn0037482.1.mrna1;Target=FBgn0037482.1 189 483 +
Chr2	stalkie_big_nohaplotig	CDS	92486070	92486253	.	+	0	Parent=FBgn0037482.1.mrna1;Target=FBgn0037482.1 484 667 +
Chr2	stalkie_big_nohaplotig	CDS	92488951	92489083	.	+	2	Parent=FBgn0037482.1.mrna1;Target=FBgn0037482.1 668 800 +
Chr2	stalkie_big_nohaplotig	CDS	92489153	92490194	.	+	1	Parent=FBgn0037482.1.mrna1;Target=FBgn0037482.1 801 1842 +
Chr2	gffcl	locus	92491528	92558895	.	-	.	ID=RLOC_00019481;geneIDs=FBgn0002306.1.path1,comp162827_c0_seq1.path1;transcripts=comp162827_c0_seq1.mrna1,FBgn0002306.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92491528	92520770	.	-	.	ID=comp162827_c0_seq1.mrna1;geneID=comp162827_c0_seq1.path1;Name=comp162827_c0_seq1;Dir=antisensecoverage=90.5;identity=99.8;matches=5281;mismatches=7;indels=1;unknowns=0;locus=RLOC_00019481
Chr2	stalkie_big_nohaplotig	exon	92491528	92491895	99	-	.	Parent=comp162827_c0_seq1.mrna1;Target=comp162827_c0_seq1 1 369 -
Chr2	stalkie_big_nohaplotig	exon	92491961	92492185	100	-	.	Parent=comp162827_c0_seq1.mrna1;Target=comp162827_c0_seq1 370 594 -
Chr2	stalkie_big_nohaplotig	exon	92492723	92493754	99	-	.	Parent=comp162827_c0_seq1.mrna1;Target=comp162827_c0_seq1 595 1626 -
Chr2	stalkie_big_nohaplotig	exon	92494926	92495864	100	-	.	Parent=comp162827_c0_seq1.mrna1;Target=comp162827_c0_seq1 1627 2565 -
Chr2	stalkie_big_nohaplotig	exon	92499535	92499771	100	-	.	Parent=comp162827_c0_seq1.mrna1;Target=comp162827_c0_seq1 2566 2802 -
Chr2	stalkie_big_nohaplotig	exon	92499866	92500513	99	-	.	Parent=comp162827_c0_seq1.mrna1;Target=comp162827_c0_seq1 2803 3450 -
Chr2	stalkie_big_nohaplotig	exon	92502160	92502397	100	-	.	Parent=comp162827_c0_seq1.mrna1;Target=comp162827_c0_seq1 3451 3688 -
Chr2	stalkie_big_nohaplotig	exon	92519170	92520770	99	-	.	Parent=comp162827_c0_seq1.mrna1;Target=comp162827_c0_seq1 3689 5289 -
Chr2	stalkie_big_nohaplotig	CDS	92491888	92491895	.	-	2	Parent=comp162827_c0_seq1.mrna1;Target=comp162827_c0_seq1 362 369 .
Chr2	stalkie_big_nohaplotig	CDS	92491961	92492185	.	-	2	Parent=comp162827_c0_seq1.mrna1;Target=comp162827_c0_seq1 370 594 .
Chr2	stalkie_big_nohaplotig	CDS	92492723	92493754	.	-	2	Parent=comp162827_c0_seq1.mrna1;Target=comp162827_c0_seq1 595 1626 .
Chr2	stalkie_big_nohaplotig	CDS	92494926	92495864	.	-	2	Parent=comp162827_c0_seq1.mrna1;Target=comp162827_c0_seq1 1627 2565 .
Chr2	stalkie_big_nohaplotig	CDS	92499535	92499771	.	-	2	Parent=comp162827_c0_seq1.mrna1;Target=comp162827_c0_seq1 2566 2802 .
Chr2	stalkie_big_nohaplotig	CDS	92499866	92500513	.	-	2	Parent=comp162827_c0_seq1.mrna1;Target=comp162827_c0_seq1 2803 3450 .
Chr2	stalkie_big_nohaplotig	CDS	92502160	92502397	.	-	0	Parent=comp162827_c0_seq1.mrna1;Target=comp162827_c0_seq1 3451 3688 .
Chr2	stalkie_big_nohaplotig	CDS	92519170	92520768	.	-	0	Parent=comp162827_c0_seq1.mrna1;Target=comp162827_c0_seq1 3689 5287 .
Chr2	stalkie_big_nohaplotig	mRNA	92491961	92558895	.	-	.	ID=FBgn0002306.1.mrna1;geneID=FBgn0002306.1.path1;Name=FBgn0002306.1;Dir=sensecoverage=99.9;identity=99.7;matches=5462;mismatches=8;indels=6;unknowns=0;locus=RLOC_00019481
Chr2	stalkie_big_nohaplotig	exon	92491961	92492185	100	-	.	Parent=FBgn0002306.1.mrna1;Target=FBgn0002306.1 5252 5476 +
Chr2	stalkie_big_nohaplotig	exon	92492723	92493754	99	-	.	Parent=FBgn0002306.1.mrna1;Target=FBgn0002306.1 4220 5251 +
Chr2	stalkie_big_nohaplotig	exon	92494926	92495864	100	-	.	Parent=FBgn0002306.1.mrna1;Target=FBgn0002306.1 3281 4219 +
Chr2	stalkie_big_nohaplotig	exon	92499535	92499771	100	-	.	Parent=FBgn0002306.1.mrna1;Target=FBgn0002306.1 3044 3280 +
Chr2	stalkie_big_nohaplotig	exon	92499866	92500513	99	-	.	Parent=FBgn0002306.1.mrna1;Target=FBgn0002306.1 2396 3043 +
Chr2	stalkie_big_nohaplotig	exon	92502160	92502397	100	-	.	Parent=FBgn0002306.1.mrna1;Target=FBgn0002306.1 2158 2395 +
Chr2	stalkie_big_nohaplotig	exon	92519170	92520770	99	-	.	Parent=FBgn0002306.1.mrna1;Target=FBgn0002306.1 557 2157 +
Chr2	stalkie_big_nohaplotig	exon	92558346	92558895	98	-	.	Parent=FBgn0002306.1.mrna1;Target=FBgn0002306.1 1 556 +
Chr2	stalkie_big_nohaplotig	CDS	92491962	92492185	.	-	2	Parent=FBgn0002306.1.mrna1;Target=FBgn0002306.1 5252 5475 +
Chr2	stalkie_big_nohaplotig	CDS	92492723	92493754	.	-	2	Parent=FBgn0002306.1.mrna1;Target=FBgn0002306.1 4220 5251 +
Chr2	stalkie_big_nohaplotig	CDS	92494926	92495864	.	-	2	Parent=FBgn0002306.1.mrna1;Target=FBgn0002306.1 3281 4219 +
Chr2	stalkie_big_nohaplotig	CDS	92499535	92499771	.	-	2	Parent=FBgn0002306.1.mrna1;Target=FBgn0002306.1 3044 3280 +
Chr2	stalkie_big_nohaplotig	CDS	92499866	92500513	.	-	2	Parent=FBgn0002306.1.mrna1;Target=FBgn0002306.1 2396 3043 +
Chr2	stalkie_big_nohaplotig	CDS	92502160	92502397	.	-	0	Parent=FBgn0002306.1.mrna1;Target=FBgn0002306.1 2158 2395 +
Chr2	stalkie_big_nohaplotig	CDS	92519170	92520770	.	-	2	Parent=FBgn0002306.1.mrna1;Target=FBgn0002306.1 557 2157 +
Chr2	stalkie_big_nohaplotig	CDS	92558346	92558895	.	-	0	Parent=FBgn0002306.1.mrna1;Target=FBgn0002306.1 1 556 +
Chr2	gffcl	locus	92536430	92538767	.	-	.	ID=RLOC_00019483;geneIDs=ORF233.path1;transcripts=ORF233.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92536430	92538767	.	-	.	ID=ORF233.mrna1;geneID=ORF233.path1;Name=ORF233;Dir=sensecoverage=99.9;identity=97.5;matches=2257;mismatches=26;indels=33;unknowns=0;locus=RLOC_00019483
Chr2	stalkie_big_nohaplotig	exon	92536430	92537074	94	-	.	Parent=ORF233.mrna1;Target=ORF233 1642 2319 +
Chr2	stalkie_big_nohaplotig	exon	92537130	92538767	98	-	.	Parent=ORF233.mrna1;Target=ORF233 4 1641 +
Chr2	stalkie_big_nohaplotig	CDS	92536430	92537074	.	-	0	Parent=ORF233.mrna1;Target=ORF233 1642 2319 +
Chr2	stalkie_big_nohaplotig	CDS	92537130	92538767	.	-	0	Parent=ORF233.mrna1;Target=ORF233 4 1641 +
Chr2	gffcl	locus	92575327	93904911	.	+	.	ID=RLOC_00019484;geneIDs=comp147859_c0_seq1.path1;transcripts=comp147859_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92575327	93904911	.	+	.	ID=comp147859_c0_seq1.mrna1;geneID=comp147859_c0_seq1.path1;Name=comp147859_c0_seq1;Dir=antisensecoverage=81.8;identity=95.7;matches=688;mismatches=7;indels=24;unknowns=0;Target=comp147859_c0_seq1 202 303 .;locus=RLOC_00019484
Chr2	stalkie_big_nohaplotig	exon	92575327	92575336	100	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 786 795 -
Chr2	stalkie_big_nohaplotig	exon	92579922	92579940	56	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 761 785 -
Chr2	stalkie_big_nohaplotig	exon	92587078	92587083	100	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 755 760 -
Chr2	stalkie_big_nohaplotig	exon	92591911	92591916	100	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 749 754 -
Chr2	stalkie_big_nohaplotig	exon	92596993	92596995	100	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 746 748 -
Chr2	stalkie_big_nohaplotig	exon	92601500	92601506	100	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 739 745 -
Chr2	stalkie_big_nohaplotig	exon	92608260	92608261	100	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 737 738 -
Chr2	stalkie_big_nohaplotig	exon	92613727	92613728	100	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 735 736 -
Chr2	stalkie_big_nohaplotig	exon	92619236	92619238	100	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 732 734 -
Chr2	stalkie_big_nohaplotig	exon	92626238	92626247	100	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 722 731 -
Chr2	stalkie_big_nohaplotig	exon	92627025	92627026	100	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 720 721 -
Chr2	stalkie_big_nohaplotig	exon	92627281	92627283	100	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 717 719 -
Chr2	stalkie_big_nohaplotig	exon	92636060	92636064	100	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 712 716 -
Chr2	stalkie_big_nohaplotig	exon	92637248	92637250	100	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 709 711 -
Chr2	stalkie_big_nohaplotig	exon	92645999	92646028	60	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 643 686 -
Chr2	stalkie_big_nohaplotig	exon	93822246	93822256	100	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 577 587 -
Chr2	stalkie_big_nohaplotig	exon	93825478	93825479	100	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 575 576 -
Chr2	stalkie_big_nohaplotig	exon	93831911	93831917	100	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 568 574 -
Chr2	stalkie_big_nohaplotig	exon	93837576	93837580	100	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 563 567 -
Chr2	stalkie_big_nohaplotig	exon	93846967	93846973	100	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 556 562 -
Chr2	stalkie_big_nohaplotig	exon	93854595	93854635	100	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 515 555 -
Chr2	stalkie_big_nohaplotig	exon	93872849	93872878	100	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 485 514 -
Chr2	stalkie_big_nohaplotig	exon	93904432	93904911	99	+	.	Parent=comp147859_c0_seq1.mrna1;Target=comp147859_c0_seq1 3 484 -
Chr2	stalkie_big_nohaplotig	CDS	93904613	93904714	.	+	0	Parent=comp147859_c0_seq1.mrna1
Chr2	gffcl	locus	92596106	92596724	.	+	.	ID=RLOC_00019485;geneIDs=comp155961_c0_seq1.path1;transcripts=comp155961_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92596106	92596724	.	+	.	ID=comp155961_c0_seq1.mrna1;geneID=comp155961_c0_seq1.path1;Name=comp155961_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.4;matches=615;mismatches=4;indels=0;unknowns=0;Target=comp155961_c0_seq1 621 3 .;CDS_Target=comp155961_c0_seq1 503 396 .;locus=RLOC_00019485
Chr2	stalkie_big_nohaplotig	exon	92596106	92596724	99	+	.	Parent=comp155961_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	92596499	92596606	.	+	0	Parent=comp155961_c0_seq1.mrna1
Chr2	gffcl	locus	92603327	92632713	.	+	.	ID=RLOC_00019486;geneIDs=FBgn0003227.1.path1;transcripts=FBgn0003227.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92603327	92632713	.	+	.	ID=FBgn0003227.1.mrna1;geneID=FBgn0003227.1.path1;Name=FBgn0003227.1;Dir=sensecoverage=100.0;identity=99.4;matches=2598;mismatches=9;indels=6;unknowns=0;locus=RLOC_00019486
Chr2	stalkie_big_nohaplotig	exon	92603327	92604221	99	+	.	Parent=FBgn0003227.1.mrna1;Target=FBgn0003227.1 1 895 +
Chr2	stalkie_big_nohaplotig	exon	92604287	92604913	99	+	.	Parent=FBgn0003227.1.mrna1;Target=FBgn0003227.1 896 1522 +
Chr2	stalkie_big_nohaplotig	exon	92604982	92605587	98	+	.	Parent=FBgn0003227.1.mrna1;Target=FBgn0003227.1 1523 2134 +
Chr2	stalkie_big_nohaplotig	exon	92608586	92608697	100	+	.	Parent=FBgn0003227.1.mrna1;Target=FBgn0003227.1 2135 2246 +
Chr2	stalkie_big_nohaplotig	exon	92632347	92632713	98	+	.	Parent=FBgn0003227.1.mrna1;Target=FBgn0003227.1 2247 2613 +
Chr2	stalkie_big_nohaplotig	CDS	92603327	92604221	.	+	0	Parent=FBgn0003227.1.mrna1;Target=FBgn0003227.1 1 895 +
Chr2	stalkie_big_nohaplotig	CDS	92604287	92604913	.	+	2	Parent=FBgn0003227.1.mrna1;Target=FBgn0003227.1 896 1522 +
Chr2	stalkie_big_nohaplotig	CDS	92604982	92605587	.	+	2	Parent=FBgn0003227.1.mrna1;Target=FBgn0003227.1 1523 2134 +
Chr2	stalkie_big_nohaplotig	CDS	92608586	92608697	.	+	2	Parent=FBgn0003227.1.mrna1;Target=FBgn0003227.1 2135 2246 +
Chr2	stalkie_big_nohaplotig	CDS	92632347	92632713	.	+	1	Parent=FBgn0003227.1.mrna1;Target=FBgn0003227.1 2247 2613 +
Chr2	gffcl	locus	92608830	92624004	.	-	.	ID=RLOC_00019487;geneIDs=FBgn0038366.1.path1;transcripts=FBgn0038366.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92608830	92624004	.	-	.	ID=FBgn0038366.1.mrna1;geneID=FBgn0038366.1.path1;Name=FBgn0038366.1;Dir=sensecoverage=100.0;identity=99.9;matches=2010;mismatches=3;indels=0;unknowns=0;locus=RLOC_00019487
Chr2	stalkie_big_nohaplotig	exon	92608830	92608931	100	-	.	Parent=FBgn0038366.1.mrna1;Target=FBgn0038366.1 1912 2013 +
Chr2	stalkie_big_nohaplotig	exon	92608997	92609139	100	-	.	Parent=FBgn0038366.1.mrna1;Target=FBgn0038366.1 1769 1911 +
Chr2	stalkie_big_nohaplotig	exon	92610216	92610556	100	-	.	Parent=FBgn0038366.1.mrna1;Target=FBgn0038366.1 1428 1768 +
Chr2	stalkie_big_nohaplotig	exon	92610612	92610725	99	-	.	Parent=FBgn0038366.1.mrna1;Target=FBgn0038366.1 1314 1427 +
Chr2	stalkie_big_nohaplotig	exon	92610782	92610861	100	-	.	Parent=FBgn0038366.1.mrna1;Target=FBgn0038366.1 1234 1313 +
Chr2	stalkie_big_nohaplotig	exon	92610920	92611085	100	-	.	Parent=FBgn0038366.1.mrna1;Target=FBgn0038366.1 1068 1233 +
Chr2	stalkie_big_nohaplotig	exon	92611455	92611830	100	-	.	Parent=FBgn0038366.1.mrna1;Target=FBgn0038366.1 692 1067 +
Chr2	stalkie_big_nohaplotig	exon	92611913	92612062	99	-	.	Parent=FBgn0038366.1.mrna1;Target=FBgn0038366.1 542 691 +
Chr2	stalkie_big_nohaplotig	exon	92613261	92613423	100	-	.	Parent=FBgn0038366.1.mrna1;Target=FBgn0038366.1 379 541 +
Chr2	stalkie_big_nohaplotig	exon	92617844	92618136	100	-	.	Parent=FBgn0038366.1.mrna1;Target=FBgn0038366.1 86 378 +
Chr2	stalkie_big_nohaplotig	exon	92623920	92624004	98	-	.	Parent=FBgn0038366.1.mrna1;Target=FBgn0038366.1 1 85 +
Chr2	stalkie_big_nohaplotig	CDS	92608830	92608931	.	-	0	Parent=FBgn0038366.1.mrna1;Target=FBgn0038366.1 1912 2013 +
Chr2	stalkie_big_nohaplotig	CDS	92608997	92609139	.	-	2	Parent=FBgn0038366.1.mrna1;Target=FBgn0038366.1 1769 1911 +
Chr2	stalkie_big_nohaplotig	CDS	92610216	92610556	.	-	1	Parent=FBgn0038366.1.mrna1;Target=FBgn0038366.1 1428 1768 +
Chr2	stalkie_big_nohaplotig	CDS	92610612	92610725	.	-	1	Parent=FBgn0038366.1.mrna1;Target=FBgn0038366.1 1314 1427 +
Chr2	stalkie_big_nohaplotig	CDS	92610782	92610861	.	-	0	Parent=FBgn0038366.1.mrna1;Target=FBgn0038366.1 1234 1313 +
Chr2	stalkie_big_nohaplotig	CDS	92610920	92611085	.	-	1	Parent=FBgn0038366.1.mrna1;Target=FBgn0038366.1 1068 1233 +
Chr2	stalkie_big_nohaplotig	CDS	92611455	92611830	.	-	2	Parent=FBgn0038366.1.mrna1;Target=FBgn0038366.1 692 1067 +
Chr2	stalkie_big_nohaplotig	CDS	92611913	92612062	.	-	2	Parent=FBgn0038366.1.mrna1;Target=FBgn0038366.1 542 691 +
Chr2	stalkie_big_nohaplotig	CDS	92613261	92613423	.	-	0	Parent=FBgn0038366.1.mrna1;Target=FBgn0038366.1 379 541 +
Chr2	stalkie_big_nohaplotig	CDS	92617844	92618136	.	-	2	Parent=FBgn0038366.1.mrna1;Target=FBgn0038366.1 86 378 +
Chr2	stalkie_big_nohaplotig	CDS	92623920	92624004	.	-	0	Parent=FBgn0038366.1.mrna1;Target=FBgn0038366.1 1 85 +
Chr2	gffcl	locus	92640616	92640665	.	+	.	ID=RLOC_00019488;geneIDs=comp162147_c3_seq1.path2;transcripts=comp162147_c3_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	92640616	92640665	.	+	.	ID=comp162147_c3_seq1.mrna2;geneID=comp162147_c3_seq1.path2;Name=comp162147_c3_seq1;Dir=indeterminatecoverage=2.4;identity=100.0;matches=50;mismatches=0;indels=0;unknowns=0;Target=comp162147_c3_seq1 2093 2044 .;locus=RLOC_00019488
Chr2	stalkie_big_nohaplotig	exon	92640616	92640665	100	+	.	Parent=comp162147_c3_seq1.mrna2
Chr2	gffcl	locus	92641539	92642371	.	.	.	ID=RLOC_00019489;geneIDs=comp74007_c0_seq1.path1,comp116825_c0_seq1.path1;transcripts=comp116825_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92641865	92642371	.	+	.	ID=comp116825_c0_seq1.mrna1;geneID=comp116825_c0_seq1.path1;Name=comp116825_c0_seq1;Dir=indeterminatecoverage=79.2;identity=98.8;matches=505;mismatches=2;indels=4;unknowns=0;Target=comp116825_c0_seq1 511 1 .;CDS_Target=comp116825_c0_seq1 511 413 .;locus=RLOC_00019489
Chr2	stalkie_big_nohaplotig	exon	92641865	92642371	98	+	.	Parent=comp116825_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	92642273	92642371	.	+	0	Parent=comp116825_c0_seq1.mrna1
Chr2	gffcl	locus	92651921	92653158	.	+	.	ID=RLOC_00019491;geneIDs=ORF1524.path1;transcripts=ORF1524.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92651921	92653158	.	+	.	ID=ORF1524.mrna1;geneID=ORF1524.path1;Name=ORF1524;Dir=sensecoverage=100.0;identity=99.8;matches=1069;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019491
Chr2	stalkie_big_nohaplotig	exon	92651921	92652365	100	+	.	Parent=ORF1524.mrna1;Target=ORF1524 1 445 +
Chr2	stalkie_big_nohaplotig	exon	92652472	92652804	99	+	.	Parent=ORF1524.mrna1;Target=ORF1524 446 778 +
Chr2	stalkie_big_nohaplotig	exon	92652866	92653158	99	+	.	Parent=ORF1524.mrna1;Target=ORF1524 779 1071 +
Chr2	stalkie_big_nohaplotig	CDS	92651921	92652365	.	+	0	Parent=ORF1524.mrna1;Target=ORF1524 1 445 +
Chr2	stalkie_big_nohaplotig	CDS	92652472	92652804	.	+	2	Parent=ORF1524.mrna1;Target=ORF1524 446 778 +
Chr2	stalkie_big_nohaplotig	CDS	92652866	92653158	.	+	2	Parent=ORF1524.mrna1;Target=ORF1524 779 1071 +
Chr2	gffcl	locus	92662137	92664801	.	-	.	ID=RLOC_00019492;geneIDs=comp139462_c0_seq1.path1;transcripts=comp139462_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92662137	92664801	.	-	.	ID=comp139462_c0_seq1.mrna1;geneID=comp139462_c0_seq1.path1;Name=comp139462_c0_seq1;Dir=antisensecoverage=91.2;identity=92.4;matches=575;mismatches=21;indels=26;unknowns=0;Target=comp139462_c0_seq1 556 621 .;locus=RLOC_00019492
Chr2	stalkie_big_nohaplotig	exon	92662137	92662192	98	-	.	Parent=comp139462_c0_seq1.mrna1;Target=comp139462_c0_seq1 1 56 -
Chr2	stalkie_big_nohaplotig	exon	92664262	92664801	91	-	.	Parent=comp139462_c0_seq1.mrna1;Target=comp139462_c0_seq1 57 622 -
Chr2	stalkie_big_nohaplotig	CDS	92664735	92664800	.	-	0	Parent=comp139462_c0_seq1.mrna1
Chr2	gffcl	locus	92665736	92666473	.	-	.	ID=RLOC_00019493;geneIDs=comp151432_c0_seq1.path1;transcripts=comp151432_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92665736	92666473	.	-	.	ID=comp151432_c0_seq1.mrna1;geneID=comp151432_c0_seq1.path1;Name=comp151432_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=732;mismatches=6;indels=5;unknowns=0;Target=comp151432_c0_seq1 743 1 .;CDS_Target=comp151432_c0_seq1 313 200 .;locus=RLOC_00019493
Chr2	stalkie_big_nohaplotig	exon	92665736	92666473	98	-	.	Parent=comp151432_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	92666161	92666274	.	-	0	Parent=comp151432_c0_seq1.mrna1
Chr2	gffcl	locus	92704226	92706462	.	-	.	ID=RLOC_00019494;geneIDs=comp143438_c0_seq1.path1;transcripts=comp143438_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92704226	92706462	.	-	.	ID=comp143438_c0_seq1.mrna1;geneID=comp143438_c0_seq1.path1;Name=comp143438_c0_seq1;Dir=sensecoverage=100.0;identity=94.6;matches=1778;mismatches=61;indels=40;unknowns=0;Target=comp143438_c0_seq1 877 906 +;locus=RLOC_00019494
Chr2	stalkie_big_nohaplotig	exon	92704226	92704577	95	-	.	Parent=comp143438_c0_seq1.mrna1;Target=comp143438_c0_seq1 1509 1862 +
Chr2	stalkie_big_nohaplotig	exon	92704634	92705377	97	-	.	Parent=comp143438_c0_seq1.mrna1;Target=comp143438_c0_seq1 765 1508 +
Chr2	stalkie_big_nohaplotig	exon	92705703	92706462	91	-	.	Parent=comp143438_c0_seq1.mrna1;Target=comp143438_c0_seq1 1 764 +
Chr2	stalkie_big_nohaplotig	CDS	92705237	92705265	.	-	0	Parent=comp143438_c0_seq1.mrna1
Chr2	gffcl	locus	92725470	92726217	.	+	.	ID=RLOC_00019495;geneIDs=comp157497_c0_seq1.path1;transcripts=comp157497_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92725470	92726217	.	+	.	ID=comp157497_c0_seq1.mrna1;geneID=comp157497_c0_seq1.path1;Name=comp157497_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=735;mismatches=13;indels=0;unknowns=0;Target=comp157497_c0_seq1 748 1 .;CDS_Target=comp157497_c0_seq1 681 187 .;locus=RLOC_00019495
Chr2	stalkie_big_nohaplotig	exon	92725470	92726217	98	+	.	Parent=comp157497_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	92725656	92726150	.	+	0	Parent=comp157497_c0_seq1.mrna1
Chr2	gffcl	locus	92857093	92857758	.	+	.	ID=RLOC_00019496;geneIDs=comp1416671_c0_seq1.path1;transcripts=comp1416671_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92857093	92857758	.	+	.	ID=comp1416671_c0_seq1.mrna1;geneID=comp1416671_c0_seq1.path1;Name=comp1416671_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=659;mismatches=7;indels=0;unknowns=0;Target=comp1416671_c0_seq1 666 1 .;CDS_Target=comp1416671_c0_seq1 407 303 .;locus=RLOC_00019496
Chr2	stalkie_big_nohaplotig	exon	92857093	92857758	98	+	.	Parent=comp1416671_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	92857395	92857499	.	+	0	Parent=comp1416671_c0_seq1.mrna1
Chr2	gffcl	locus	92875744	92876153	.	-	.	ID=RLOC_00019497;geneIDs=comp842793_c0_seq1.path1;transcripts=comp842793_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92875744	92876153	.	-	.	ID=comp842793_c0_seq1.mrna1;geneID=comp842793_c0_seq1.path1;Name=comp842793_c0_seq1;Dir=indeterminatecoverage=94.5;identity=99.8;matches=409;mismatches=1;indels=0;unknowns=0;Target=comp842793_c0_seq1 434 25 .;CDS_Target=comp842793_c0_seq1 275 27 .;locus=RLOC_00019497
Chr2	stalkie_big_nohaplotig	exon	92875744	92876153	99	-	.	Parent=comp842793_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	92875903	92876151	.	-	0	Parent=comp842793_c0_seq1.mrna1
Chr2	gffcl	locus	92887517	92888780	.	-	.	ID=RLOC_00019498;geneIDs=comp156947_c0_seq1.path1;transcripts=comp156947_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92887517	92888780	.	-	.	ID=comp156947_c0_seq1.mrna1;geneID=comp156947_c0_seq1.path1;Name=comp156947_c0_seq1;Dir=indeterminatecoverage=99.2;identity=97.5;matches=1233;mismatches=4;indels=27;unknowns=0;Target=comp156947_c0_seq1 1237 1 .;CDS_Target=comp156947_c0_seq1 1086 979 .;locus=RLOC_00019498
Chr2	stalkie_big_nohaplotig	exon	92887517	92888780	97	-	.	Parent=comp156947_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	92887668	92887775	.	-	0	Parent=comp156947_c0_seq1.mrna1
Chr2	gffcl	locus	92891501	92893728	.	-	.	ID=RLOC_00019499;geneIDs=comp154840_c0_seq1.path1;transcripts=comp154840_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92891501	92893728	.	-	.	ID=comp154840_c0_seq1.mrna1;geneID=comp154840_c0_seq1.path1;Name=comp154840_c0_seq1;Dir=antisensecoverage=99.8;identity=99.9;matches=874;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019499
Chr2	stalkie_big_nohaplotig	exon	92891501	92891648	100	-	.	Parent=comp154840_c0_seq1.mrna1;Target=comp154840_c0_seq1 3 150 -
Chr2	stalkie_big_nohaplotig	exon	92891705	92892055	100	-	.	Parent=comp154840_c0_seq1.mrna1;Target=comp154840_c0_seq1 151 501 -
Chr2	stalkie_big_nohaplotig	exon	92892139	92892250	99	-	.	Parent=comp154840_c0_seq1.mrna1;Target=comp154840_c0_seq1 502 613 -
Chr2	stalkie_big_nohaplotig	exon	92892306	92892405	100	-	.	Parent=comp154840_c0_seq1.mrna1;Target=comp154840_c0_seq1 614 713 -
Chr2	stalkie_big_nohaplotig	exon	92893506	92893612	100	-	.	Parent=comp154840_c0_seq1.mrna1;Target=comp154840_c0_seq1 714 820 -
Chr2	stalkie_big_nohaplotig	exon	92893672	92893728	100	-	.	Parent=comp154840_c0_seq1.mrna1;Target=comp154840_c0_seq1 821 877 -
Chr2	stalkie_big_nohaplotig	CDS	92891625	92891648	.	-	0	Parent=comp154840_c0_seq1.mrna1;Target=comp154840_c0_seq1 127 150 .
Chr2	stalkie_big_nohaplotig	CDS	92891705	92892055	.	-	0	Parent=comp154840_c0_seq1.mrna1;Target=comp154840_c0_seq1 151 501 .
Chr2	gffcl	locus	92928216	92963553	.	+	.	ID=RLOC_00019500;geneIDs=FBgn0037525.1.path1;transcripts=FBgn0037525.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92928216	92963553	.	+	.	ID=FBgn0037525.1.mrna1;geneID=FBgn0037525.1.path1;Name=FBgn0037525.1;Dir=sensecoverage=96.8;identity=100.0;matches=2327;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019500
Chr2	stalkie_big_nohaplotig	exon	92928216	92928321	100	+	.	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 79 184 +
Chr2	stalkie_big_nohaplotig	exon	92930221	92930342	100	+	.	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 185 306 +
Chr2	stalkie_big_nohaplotig	exon	92934844	92934957	100	+	.	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 307 420 +
Chr2	stalkie_big_nohaplotig	exon	92939852	92940095	100	+	.	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 421 664 +
Chr2	stalkie_big_nohaplotig	exon	92945058	92945118	100	+	.	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 665 725 +
Chr2	stalkie_big_nohaplotig	exon	92947832	92948084	100	+	.	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 726 978 +
Chr2	stalkie_big_nohaplotig	exon	92948153	92948271	100	+	.	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 979 1097 +
Chr2	stalkie_big_nohaplotig	exon	92948356	92948534	100	+	.	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 1098 1276 +
Chr2	stalkie_big_nohaplotig	exon	92948628	92948801	100	+	.	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 1277 1450 +
Chr2	stalkie_big_nohaplotig	exon	92952173	92952367	99	+	.	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 1451 1645 +
Chr2	stalkie_big_nohaplotig	exon	92957700	92958119	100	+	.	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 1646 2065 +
Chr2	stalkie_big_nohaplotig	exon	92963146	92963364	100	+	.	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 2066 2284 +
Chr2	stalkie_big_nohaplotig	exon	92963432	92963553	100	+	.	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 2285 2406 +
Chr2	stalkie_big_nohaplotig	CDS	92928216	92928321	.	+	0	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 79 184 +
Chr2	stalkie_big_nohaplotig	CDS	92930221	92930342	.	+	2	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 185 306 +
Chr2	stalkie_big_nohaplotig	CDS	92934844	92934957	.	+	0	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 307 420 +
Chr2	stalkie_big_nohaplotig	CDS	92939852	92940095	.	+	0	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 421 664 +
Chr2	stalkie_big_nohaplotig	CDS	92945058	92945118	.	+	2	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 665 725 +
Chr2	stalkie_big_nohaplotig	CDS	92947832	92948084	.	+	1	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 726 978 +
Chr2	stalkie_big_nohaplotig	CDS	92948153	92948271	.	+	0	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 979 1097 +
Chr2	stalkie_big_nohaplotig	CDS	92948356	92948534	.	+	1	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 1098 1276 +
Chr2	stalkie_big_nohaplotig	CDS	92948628	92948801	.	+	2	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 1277 1450 +
Chr2	stalkie_big_nohaplotig	CDS	92952173	92952367	.	+	2	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 1451 1645 +
Chr2	stalkie_big_nohaplotig	CDS	92957700	92958119	.	+	2	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 1646 2065 +
Chr2	stalkie_big_nohaplotig	CDS	92963146	92963364	.	+	2	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 2066 2284 +
Chr2	stalkie_big_nohaplotig	CDS	92963432	92963553	.	+	2	Parent=FBgn0037525.1.mrna1;Target=FBgn0037525.1 2285 2406 +
Chr2	gffcl	locus	92984581	92992383	.	-	.	ID=RLOC_00019501;geneIDs=FBgn0042104.1.path1;transcripts=FBgn0042104.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92984581	92992383	.	-	.	ID=FBgn0042104.1.mrna1;geneID=FBgn0042104.1.path1;Name=FBgn0042104.1;Dir=sensecoverage=100.0;identity=99.4;matches=1318;mismatches=8;indels=0;unknowns=0;locus=RLOC_00019501
Chr2	stalkie_big_nohaplotig	exon	92984581	92984774	98	-	.	Parent=FBgn0042104.1.mrna1;Target=FBgn0042104.1 1133 1326 +
Chr2	stalkie_big_nohaplotig	exon	92985138	92985798	99	-	.	Parent=FBgn0042104.1.mrna1;Target=FBgn0042104.1 472 1132 +
Chr2	stalkie_big_nohaplotig	exon	92985861	92986075	97	-	.	Parent=FBgn0042104.1.mrna1;Target=FBgn0042104.1 257 471 +
Chr2	stalkie_big_nohaplotig	exon	92987041	92987169	100	-	.	Parent=FBgn0042104.1.mrna1;Target=FBgn0042104.1 128 256 +
Chr2	stalkie_big_nohaplotig	exon	92992257	92992383	100	-	.	Parent=FBgn0042104.1.mrna1;Target=FBgn0042104.1 1 127 +
Chr2	stalkie_big_nohaplotig	CDS	92984581	92984774	.	-	2	Parent=FBgn0042104.1.mrna1;Target=FBgn0042104.1 1133 1326 +
Chr2	stalkie_big_nohaplotig	CDS	92985138	92985798	.	-	0	Parent=FBgn0042104.1.mrna1;Target=FBgn0042104.1 472 1132 +
Chr2	stalkie_big_nohaplotig	CDS	92985861	92986075	.	-	2	Parent=FBgn0042104.1.mrna1;Target=FBgn0042104.1 257 471 +
Chr2	stalkie_big_nohaplotig	CDS	92987041	92987169	.	-	2	Parent=FBgn0042104.1.mrna1;Target=FBgn0042104.1 128 256 +
Chr2	stalkie_big_nohaplotig	CDS	92992257	92992383	.	-	0	Parent=FBgn0042104.1.mrna1;Target=FBgn0042104.1 1 127 +
Chr2	gffcl	locus	92992924	93001671	.	-	.	ID=RLOC_00019502;geneIDs=FBgn0042102.1.path1;transcripts=FBgn0042102.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	92992924	93001671	.	-	.	ID=FBgn0042102.1.mrna1;geneID=FBgn0042102.1.path1;Name=FBgn0042102.1;Dir=sensecoverage=100.0;identity=99.7;matches=1355;mismatches=4;indels=0;unknowns=0;locus=RLOC_00019502
Chr2	stalkie_big_nohaplotig	exon	92992924	92993108	100	-	.	Parent=FBgn0042102.1.mrna1;Target=FBgn0042102.1 1175 1359 +
Chr2	stalkie_big_nohaplotig	exon	92993233	92993908	99	-	.	Parent=FBgn0042102.1.mrna1;Target=FBgn0042102.1 499 1174 +
Chr2	stalkie_big_nohaplotig	exon	92995529	92995743	100	-	.	Parent=FBgn0042102.1.mrna1;Target=FBgn0042102.1 284 498 +
Chr2	stalkie_big_nohaplotig	exon	92996197	92996337	100	-	.	Parent=FBgn0042102.1.mrna1;Target=FBgn0042102.1 143 283 +
Chr2	stalkie_big_nohaplotig	exon	93001530	93001671	100	-	.	Parent=FBgn0042102.1.mrna1;Target=FBgn0042102.1 1 142 +
Chr2	stalkie_big_nohaplotig	CDS	92992924	92993108	.	-	2	Parent=FBgn0042102.1.mrna1;Target=FBgn0042102.1 1175 1359 +
Chr2	stalkie_big_nohaplotig	CDS	92993233	92993908	.	-	0	Parent=FBgn0042102.1.mrna1;Target=FBgn0042102.1 499 1174 +
Chr2	stalkie_big_nohaplotig	CDS	92995529	92995743	.	-	2	Parent=FBgn0042102.1.mrna1;Target=FBgn0042102.1 284 498 +
Chr2	stalkie_big_nohaplotig	CDS	92996197	92996337	.	-	2	Parent=FBgn0042102.1.mrna1;Target=FBgn0042102.1 143 283 +
Chr2	stalkie_big_nohaplotig	CDS	93001530	93001671	.	-	0	Parent=FBgn0042102.1.mrna1;Target=FBgn0042102.1 1 142 +
Chr2	gffcl	locus	93004930	93006662	.	-	.	ID=RLOC_00019503;geneIDs=FBgn0042102.3.path1;transcripts=FBgn0042102.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93004930	93006662	.	-	.	ID=FBgn0042102.3.mrna1;geneID=FBgn0042102.3.path1;Name=FBgn0042102.3;Dir=sensecoverage=100.0;identity=98.7;matches=1179;mismatches=15;indels=0;unknowns=0;locus=RLOC_00019503
Chr2	stalkie_big_nohaplotig	exon	93004930	93005048	99	-	.	Parent=FBgn0042102.3.mrna1;Target=FBgn0042102.3 1076 1194 +
Chr2	stalkie_big_nohaplotig	exon	93005391	93005955	98	-	.	Parent=FBgn0042102.3.mrna1;Target=FBgn0042102.3 511 1075 +
Chr2	stalkie_big_nohaplotig	exon	93006018	93006235	99	-	.	Parent=FBgn0042102.3.mrna1;Target=FBgn0042102.3 293 510 +
Chr2	stalkie_big_nohaplotig	exon	93006305	93006469	97	-	.	Parent=FBgn0042102.3.mrna1;Target=FBgn0042102.3 128 292 +
Chr2	stalkie_big_nohaplotig	exon	93006536	93006662	100	-	.	Parent=FBgn0042102.3.mrna1;Target=FBgn0042102.3 1 127 +
Chr2	stalkie_big_nohaplotig	CDS	93004930	93005048	.	-	2	Parent=FBgn0042102.3.mrna1;Target=FBgn0042102.3 1076 1194 +
Chr2	stalkie_big_nohaplotig	CDS	93005391	93005955	.	-	0	Parent=FBgn0042102.3.mrna1;Target=FBgn0042102.3 511 1075 +
Chr2	stalkie_big_nohaplotig	CDS	93006018	93006235	.	-	2	Parent=FBgn0042102.3.mrna1;Target=FBgn0042102.3 293 510 +
Chr2	stalkie_big_nohaplotig	CDS	93006305	93006469	.	-	2	Parent=FBgn0042102.3.mrna1;Target=FBgn0042102.3 128 292 +
Chr2	stalkie_big_nohaplotig	CDS	93006536	93006662	.	-	0	Parent=FBgn0042102.3.mrna1;Target=FBgn0042102.3 1 127 +
Chr2	gffcl	locus	93033979	93036411	.	-	.	ID=RLOC_00019505;geneIDs=FBgn0042102.2.path1;transcripts=FBgn0042102.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93033979	93036411	.	-	.	ID=FBgn0042102.2.mrna1;geneID=FBgn0042102.2.path1;Name=FBgn0042102.2;Dir=sensecoverage=99.0;identity=99.9;matches=1184;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019505
Chr2	stalkie_big_nohaplotig	exon	93033979	93034103	100	-	.	Parent=FBgn0042102.2.mrna1;Target=FBgn0042102.2 1073 1197 +
Chr2	stalkie_big_nohaplotig	exon	93034792	93035395	99	-	.	Parent=FBgn0042102.2.mrna1;Target=FBgn0042102.2 469 1072 +
Chr2	stalkie_big_nohaplotig	exon	93035574	93035785	100	-	.	Parent=FBgn0042102.2.mrna1;Target=FBgn0042102.2 257 468 +
Chr2	stalkie_big_nohaplotig	exon	93036021	93036146	100	-	.	Parent=FBgn0042102.2.mrna1;Target=FBgn0042102.2 131 256 +
Chr2	stalkie_big_nohaplotig	exon	93036294	93036411	100	-	.	Parent=FBgn0042102.2.mrna1;Target=FBgn0042102.2 13 130 +
Chr2	stalkie_big_nohaplotig	CDS	93033979	93034103	.	-	2	Parent=FBgn0042102.2.mrna1;Target=FBgn0042102.2 1073 1197 +
Chr2	stalkie_big_nohaplotig	CDS	93034792	93035395	.	-	0	Parent=FBgn0042102.2.mrna1;Target=FBgn0042102.2 469 1072 +
Chr2	stalkie_big_nohaplotig	CDS	93035574	93035785	.	-	2	Parent=FBgn0042102.2.mrna1;Target=FBgn0042102.2 257 468 +
Chr2	stalkie_big_nohaplotig	CDS	93036021	93036146	.	-	2	Parent=FBgn0042102.2.mrna1;Target=FBgn0042102.2 131 256 +
Chr2	stalkie_big_nohaplotig	CDS	93036294	93036411	.	-	0	Parent=FBgn0042102.2.mrna1;Target=FBgn0042102.2 13 130 +
Chr2	gffcl	locus	93039100	93045156	.	+	.	ID=RLOC_00019506;geneIDs=FBgn0037517.1.path1;transcripts=FBgn0037517.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93039100	93045156	.	+	.	ID=FBgn0037517.1.mrna1;geneID=FBgn0037517.1.path1;Name=FBgn0037517.1;Dir=sensecoverage=100.0;identity=99.6;matches=1396;mismatches=5;indels=0;unknowns=0;locus=RLOC_00019506
Chr2	stalkie_big_nohaplotig	exon	93039100	93039268	99	+	.	Parent=FBgn0037517.1.mrna1;Target=FBgn0037517.1 1 169 +
Chr2	stalkie_big_nohaplotig	exon	93042517	93042675	100	+	.	Parent=FBgn0037517.1.mrna1;Target=FBgn0037517.1 170 328 +
Chr2	stalkie_big_nohaplotig	exon	93042730	93042944	100	+	.	Parent=FBgn0037517.1.mrna1;Target=FBgn0037517.1 329 543 +
Chr2	stalkie_big_nohaplotig	exon	93043982	93044582	99	+	.	Parent=FBgn0037517.1.mrna1;Target=FBgn0037517.1 544 1144 +
Chr2	stalkie_big_nohaplotig	exon	93044900	93045156	99	+	.	Parent=FBgn0037517.1.mrna1;Target=FBgn0037517.1 1145 1401 +
Chr2	stalkie_big_nohaplotig	CDS	93039100	93039268	.	+	0	Parent=FBgn0037517.1.mrna1;Target=FBgn0037517.1 1 169 +
Chr2	stalkie_big_nohaplotig	CDS	93042517	93042675	.	+	2	Parent=FBgn0037517.1.mrna1;Target=FBgn0037517.1 170 328 +
Chr2	stalkie_big_nohaplotig	CDS	93042730	93042944	.	+	2	Parent=FBgn0037517.1.mrna1;Target=FBgn0037517.1 329 543 +
Chr2	stalkie_big_nohaplotig	CDS	93043982	93044582	.	+	0	Parent=FBgn0037517.1.mrna1;Target=FBgn0037517.1 544 1144 +
Chr2	stalkie_big_nohaplotig	CDS	93044900	93045156	.	+	2	Parent=FBgn0037517.1.mrna1;Target=FBgn0037517.1 1145 1401 +
Chr2	gffcl	locus	93048368	93054834	.	+	.	ID=RLOC_00019507;geneIDs=FBgn0037518.2.path1;transcripts=FBgn0037518.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93048368	93054834	.	+	.	ID=FBgn0037518.2.mrna1;geneID=FBgn0037518.2.path1;Name=FBgn0037518.2;Dir=sensecoverage=100.0;identity=100.0;matches=1371;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019507
Chr2	stalkie_big_nohaplotig	exon	93048368	93048503	100	+	.	Parent=FBgn0037518.2.mrna1;Target=FBgn0037518.2 1 136 +
Chr2	stalkie_big_nohaplotig	exon	93053470	93053819	100	+	.	Parent=FBgn0037518.2.mrna1;Target=FBgn0037518.2 137 486 +
Chr2	stalkie_big_nohaplotig	exon	93053892	93054456	100	+	.	Parent=FBgn0037518.2.mrna1;Target=FBgn0037518.2 487 1051 +
Chr2	stalkie_big_nohaplotig	exon	93054515	93054834	100	+	.	Parent=FBgn0037518.2.mrna1;Target=FBgn0037518.2 1052 1371 +
Chr2	stalkie_big_nohaplotig	CDS	93048368	93048503	.	+	0	Parent=FBgn0037518.2.mrna1;Target=FBgn0037518.2 1 136 +
Chr2	stalkie_big_nohaplotig	CDS	93053470	93053819	.	+	2	Parent=FBgn0037518.2.mrna1;Target=FBgn0037518.2 137 486 +
Chr2	stalkie_big_nohaplotig	CDS	93053892	93054456	.	+	0	Parent=FBgn0037518.2.mrna1;Target=FBgn0037518.2 487 1051 +
Chr2	stalkie_big_nohaplotig	CDS	93054515	93054834	.	+	2	Parent=FBgn0037518.2.mrna1;Target=FBgn0037518.2 1052 1371 +
Chr2	gffcl	locus	93065147	93067811	.	-	.	ID=RLOC_00019508;geneIDs=FBgn0042101.1.path1;transcripts=FBgn0042101.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93065147	93067811	.	-	.	ID=FBgn0042101.1.mrna1;geneID=FBgn0042101.1.path1;Name=FBgn0042101.1;Dir=sensecoverage=100.0;identity=100.0;matches=1362;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019508
Chr2	stalkie_big_nohaplotig	exon	93065147	93065334	100	-	.	Parent=FBgn0042101.1.mrna1;Target=FBgn0042101.1 1175 1362 +
Chr2	stalkie_big_nohaplotig	exon	93065406	93066248	100	-	.	Parent=FBgn0042101.1.mrna1;Target=FBgn0042101.1 332 1174 +
Chr2	stalkie_big_nohaplotig	exon	93066543	93066755	100	-	.	Parent=FBgn0042101.1.mrna1;Target=FBgn0042101.1 119 331 +
Chr2	stalkie_big_nohaplotig	exon	93067694	93067811	100	-	.	Parent=FBgn0042101.1.mrna1;Target=FBgn0042101.1 1 118 +
Chr2	stalkie_big_nohaplotig	CDS	93065147	93065334	.	-	2	Parent=FBgn0042101.1.mrna1;Target=FBgn0042101.1 1175 1362 +
Chr2	stalkie_big_nohaplotig	CDS	93065406	93066248	.	-	2	Parent=FBgn0042101.1.mrna1;Target=FBgn0042101.1 332 1174 +
Chr2	stalkie_big_nohaplotig	CDS	93066543	93066755	.	-	2	Parent=FBgn0042101.1.mrna1;Target=FBgn0042101.1 119 331 +
Chr2	stalkie_big_nohaplotig	CDS	93067694	93067811	.	-	0	Parent=FBgn0042101.1.mrna1;Target=FBgn0042101.1 1 118 +
Chr2	gffcl	locus	93076514	93077301	.	-	.	ID=RLOC_00019509;geneIDs=comp156378_c0_seq1.path1;transcripts=comp156378_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93076514	93077301	.	-	.	ID=comp156378_c0_seq1.mrna1;geneID=comp156378_c0_seq1.path1;Name=comp156378_c0_seq1;Dir=indeterminatecoverage=99.5;identity=97.5;matches=776;mismatches=12;indels=8;unknowns=0;Target=comp156378_c0_seq1 799 4 .;CDS_Target=comp156378_c0_seq1 406 266 .;locus=RLOC_00019509
Chr2	stalkie_big_nohaplotig	exon	93076514	93077301	97	-	.	Parent=comp156378_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	93076907	93077047	.	-	0	Parent=comp156378_c0_seq1.mrna1
Chr2	gffcl	locus	93077747	93078464	.	-	.	ID=RLOC_00019510;geneIDs=comp149544_c0_seq1.path1;transcripts=comp149544_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93077747	93078464	.	-	.	ID=comp149544_c0_seq1.mrna1;geneID=comp149544_c0_seq1.path1;Name=comp149544_c0_seq1;Dir=indeterminatecoverage=96.8;identity=99.9;matches=717;mismatches=1;indels=0;unknowns=0;Target=comp149544_c0_seq1 718 1 .;CDS_Target=comp149544_c0_seq1 718 446 .;locus=RLOC_00019510
Chr2	stalkie_big_nohaplotig	exon	93077747	93078464	99	-	.	Parent=comp149544_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	93077747	93078019	.	-	0	Parent=comp149544_c0_seq1.mrna1
Chr2	gffcl	locus	93079428	93084301	.	-	.	ID=RLOC_00019511;geneIDs=FBgn0037519.1.path1;transcripts=FBgn0037519.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93079428	93084301	.	-	.	ID=FBgn0037519.1.mrna1;geneID=FBgn0037519.1.path1;Name=FBgn0037519.1;Dir=sensecoverage=100.0;identity=99.5;matches=1379;mismatches=7;indels=0;unknowns=0;locus=RLOC_00019511
Chr2	stalkie_big_nohaplotig	exon	93079428	93079750	99	-	.	Parent=FBgn0037519.1.mrna1;Target=FBgn0037519.1 1064 1386 +
Chr2	stalkie_big_nohaplotig	exon	93080995	93081610	99	-	.	Parent=FBgn0037519.1.mrna1;Target=FBgn0037519.1 448 1063 +
Chr2	stalkie_big_nohaplotig	exon	93083735	93084057	99	-	.	Parent=FBgn0037519.1.mrna1;Target=FBgn0037519.1 125 447 +
Chr2	stalkie_big_nohaplotig	exon	93084178	93084301	100	-	.	Parent=FBgn0037519.1.mrna1;Target=FBgn0037519.1 1 124 +
Chr2	stalkie_big_nohaplotig	CDS	93079428	93079750	.	-	2	Parent=FBgn0037519.1.mrna1;Target=FBgn0037519.1 1064 1386 +
Chr2	stalkie_big_nohaplotig	CDS	93080995	93081610	.	-	0	Parent=FBgn0037519.1.mrna1;Target=FBgn0037519.1 448 1063 +
Chr2	stalkie_big_nohaplotig	CDS	93083735	93084057	.	-	2	Parent=FBgn0037519.1.mrna1;Target=FBgn0037519.1 125 447 +
Chr2	stalkie_big_nohaplotig	CDS	93084178	93084301	.	-	0	Parent=FBgn0037519.1.mrna1;Target=FBgn0037519.1 1 124 +
Chr2	gffcl	locus	93089243	93100758	.	-	.	ID=RLOC_00019512;geneIDs=FBgn0037520.1.path1;transcripts=FBgn0037520.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93089243	93100758	.	-	.	ID=FBgn0037520.1.mrna1;geneID=FBgn0037520.1.path1;Name=FBgn0037520.1;Dir=sensecoverage=100.0;identity=99.3;matches=944;mismatches=7;indels=0;unknowns=0;locus=RLOC_00019512
Chr2	stalkie_big_nohaplotig	exon	93089243	93089698	98	-	.	Parent=FBgn0037520.1.mrna1;Target=FBgn0037520.1 496 951 +
Chr2	stalkie_big_nohaplotig	exon	93090026	93090393	99	-	.	Parent=FBgn0037520.1.mrna1;Target=FBgn0037520.1 128 495 +
Chr2	stalkie_big_nohaplotig	exon	93100632	93100758	99	-	.	Parent=FBgn0037520.1.mrna1;Target=FBgn0037520.1 1 127 +
Chr2	stalkie_big_nohaplotig	CDS	93089243	93089698	.	-	0	Parent=FBgn0037520.1.mrna1;Target=FBgn0037520.1 496 951 +
Chr2	stalkie_big_nohaplotig	CDS	93090026	93090393	.	-	2	Parent=FBgn0037520.1.mrna1;Target=FBgn0037520.1 128 495 +
Chr2	stalkie_big_nohaplotig	CDS	93100632	93100758	.	-	0	Parent=FBgn0037520.1.mrna1;Target=FBgn0037520.1 1 127 +
Chr2	gffcl	locus	93101169	93101846	.	-	.	ID=RLOC_00019513;geneIDs=comp150197_c1_seq1.path1;transcripts=comp150197_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93101169	93101846	.	-	.	ID=comp150197_c1_seq1.mrna1;geneID=comp150197_c1_seq1.path1;Name=comp150197_c1_seq1;Dir=antisensecoverage=96.0;identity=99.6;matches=498;mismatches=2;indels=0;unknowns=0;Target=comp150197_c1_seq1 97 186 .;locus=RLOC_00019513
Chr2	stalkie_big_nohaplotig	exon	93101169	93101431	100	-	.	Parent=comp150197_c1_seq1.mrna1;Target=comp150197_c1_seq1 1 263 -
Chr2	stalkie_big_nohaplotig	exon	93101610	93101846	99	-	.	Parent=comp150197_c1_seq1.mrna1;Target=comp150197_c1_seq1 264 500 -
Chr2	stalkie_big_nohaplotig	CDS	93101265	93101354	.	-	0	Parent=comp150197_c1_seq1.mrna1
Chr2	gffcl	locus	93102590	93103096	.	+	.	ID=RLOC_00019514;geneIDs=comp154807_c1_seq1.path1;transcripts=comp154807_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93102590	93103096	.	+	.	ID=comp154807_c1_seq1.mrna1;geneID=comp154807_c1_seq1.path1;Name=comp154807_c1_seq1;Dir=indeterminatecoverage=99.0;identity=99.2;matches=503;mismatches=4;indels=0;unknowns=0;Target=comp154807_c1_seq1 507 1 .;CDS_Target=comp154807_c1_seq1 119 3 .;locus=RLOC_00019514
Chr2	stalkie_big_nohaplotig	exon	93102590	93103096	99	+	.	Parent=comp154807_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	93102592	93102708	.	+	0	Parent=comp154807_c1_seq1.mrna1
Chr2	gffcl	locus	93103107	93103644	.	-	.	ID=RLOC_00019515;geneIDs=comp149781_c0_seq1.path1;transcripts=comp149781_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93103107	93103644	.	-	.	ID=comp149781_c0_seq1.mrna1;geneID=comp149781_c0_seq1.path1;Name=comp149781_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=531;mismatches=7;indels=3;unknowns=0;Target=comp149781_c0_seq1 541 1 .;CDS_Target=comp149781_c0_seq1 82 2 .;locus=RLOC_00019515
Chr2	stalkie_big_nohaplotig	exon	93103107	93103644	98	-	.	Parent=comp149781_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	93103563	93103643	.	-	0	Parent=comp149781_c0_seq1.mrna1
Chr2	gffcl	locus	93111872	93122726	.	-	.	ID=RLOC_00019516;geneIDs=FBgn0037521.1.path1,comp100408_c0_seq1.path1;transcripts=FBgn0037521.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93111872	93122355	.	-	.	ID=FBgn0037521.1.mrna1;geneID=FBgn0037521.1.path1;Name=FBgn0037521.1;Dir=sensecoverage=100.0;identity=99.9;matches=1384;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019516
Chr2	stalkie_big_nohaplotig	exon	93111872	93112077	100	-	.	Parent=FBgn0037521.1.mrna1;Target=FBgn0037521.1 1181 1386 +
Chr2	stalkie_big_nohaplotig	exon	93115015	93115654	99	-	.	Parent=FBgn0037521.1.mrna1;Target=FBgn0037521.1 541 1180 +
Chr2	stalkie_big_nohaplotig	exon	93115935	93116287	100	-	.	Parent=FBgn0037521.1.mrna1;Target=FBgn0037521.1 188 540 +
Chr2	stalkie_big_nohaplotig	exon	93121948	93122071	100	-	.	Parent=FBgn0037521.1.mrna1;Target=FBgn0037521.1 64 187 +
Chr2	stalkie_big_nohaplotig	exon	93122293	93122355	100	-	.	Parent=FBgn0037521.1.mrna1;Target=FBgn0037521.1 1 63 +
Chr2	stalkie_big_nohaplotig	CDS	93111872	93112077	.	-	2	Parent=FBgn0037521.1.mrna1;Target=FBgn0037521.1 1181 1386 +
Chr2	stalkie_big_nohaplotig	CDS	93115015	93115654	.	-	0	Parent=FBgn0037521.1.mrna1;Target=FBgn0037521.1 541 1180 +
Chr2	stalkie_big_nohaplotig	CDS	93115935	93116287	.	-	2	Parent=FBgn0037521.1.mrna1;Target=FBgn0037521.1 188 540 +
Chr2	stalkie_big_nohaplotig	CDS	93121948	93122071	.	-	0	Parent=FBgn0037521.1.mrna1;Target=FBgn0037521.1 64 187 +
Chr2	stalkie_big_nohaplotig	CDS	93122293	93122355	.	-	0	Parent=FBgn0037521.1.mrna1;Target=FBgn0037521.1 1 63 +
Chr2	gffcl	locus	93125872	93126827	.	+	.	ID=RLOC_00019517;geneIDs=FBgn0051472.1.path1;transcripts=FBgn0051472.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93125872	93126827	.	+	.	ID=FBgn0051472.1.mrna1;geneID=FBgn0051472.1.path1;Name=FBgn0051472.1;Dir=sensecoverage=100.0;identity=99.6;matches=747;mismatches=3;indels=0;unknowns=0;locus=RLOC_00019517
Chr2	stalkie_big_nohaplotig	exon	93125872	93125944	100	+	.	Parent=FBgn0051472.1.mrna1;Target=FBgn0051472.1 1 73 +
Chr2	stalkie_big_nohaplotig	exon	93126003	93126159	100	+	.	Parent=FBgn0051472.1.mrna1;Target=FBgn0051472.1 74 230 +
Chr2	stalkie_big_nohaplotig	exon	93126244	93126700	99	+	.	Parent=FBgn0051472.1.mrna1;Target=FBgn0051472.1 231 687 +
Chr2	stalkie_big_nohaplotig	exon	93126765	93126827	100	+	.	Parent=FBgn0051472.1.mrna1;Target=FBgn0051472.1 688 750 +
Chr2	stalkie_big_nohaplotig	CDS	93125872	93125944	.	+	0	Parent=FBgn0051472.1.mrna1;Target=FBgn0051472.1 1 73 +
Chr2	stalkie_big_nohaplotig	CDS	93126003	93126159	.	+	2	Parent=FBgn0051472.1.mrna1;Target=FBgn0051472.1 74 230 +
Chr2	stalkie_big_nohaplotig	CDS	93126244	93126700	.	+	1	Parent=FBgn0051472.1.mrna1;Target=FBgn0051472.1 231 687 +
Chr2	stalkie_big_nohaplotig	CDS	93126765	93126827	.	+	0	Parent=FBgn0051472.1.mrna1;Target=FBgn0051472.1 688 750 +
Chr2	gffcl	locus	93127486	93128765	.	+	.	ID=RLOC_00019518;geneIDs=comp145113_c0_seq1.path1,comp152107_c0_seq1.path1;transcripts=comp152107_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93127486	93128351	.	+	.	ID=comp152107_c0_seq1.mrna1;geneID=comp152107_c0_seq1.path1;Name=comp152107_c0_seq1;Dir=indeterminatecoverage=97.6;identity=99.5;matches=864;mismatches=2;indels=2;unknowns=0;Target=comp152107_c0_seq1 876 9 .;CDS_Target=comp152107_c0_seq1 447 280 .;locus=RLOC_00019518
Chr2	stalkie_big_nohaplotig	exon	93127486	93128351	99	+	.	Parent=comp152107_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	93127757	93127924	.	+	0	Parent=comp152107_c0_seq1.mrna1
Chr2	gffcl	locus	93148429	94203759	.	+	.	ID=RLOC_00019519;geneIDs=FBgn0083963.path1,FBgn0015569.1.path1,comp145434_c0_seq1.path1,comp157080_c1_seq1.path1;transcripts=FBgn0083963.mrna1,FBgn0083963.mrna1,comp145434_c0_seq1.mrna1,FBgn0015569.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93148441	93152694	.	+	.	ID=FBgn0083963.mrna1;geneID=FBgn0083963.path1;Name=FBgn0083963;Dir=sensecoverage=99.9;identity=99.5;matches=1303;mismatches=7;indels=0;unknowns=0;locus=RLOC_00019519
Chr2	stalkie_big_nohaplotig	exon	93148441	93152694	.	+	.	Parent=FBgn0083963.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93148441	94196649	.	+	.	ID=FBgn0083963.mrna1;geneID=FBgn0083963.path1;Name=FBgn0083963;Dir=sensecoverage=68.3;identity=97.2;matches=1103;mismatches=25;indels=7;unknowns=0;locus=RLOC_00019519
Chr2	stalkie_big_nohaplotig	exon	93148441	93148620	98	+	.	Parent=FBgn0083963.mrna1;Target=FBgn0083963 1 180 +
Chr2	stalkie_big_nohaplotig	exon	93150973	93151124	99	+	.	Parent=FBgn0083963.mrna1;Target=FBgn0083963 181 332 +
Chr2	stalkie_big_nohaplotig	exon	93151571	93151683	100	+	.	Parent=FBgn0083963.mrna1;Target=FBgn0083963 333 445 +
Chr2	stalkie_big_nohaplotig	exon	93151830	93152694	99	+	.	Parent=FBgn0083963.mrna1;Target=FBgn0083963 446 1310 +
Chr2	stalkie_big_nohaplotig	exon	93905978	93906834	100	+	.	Parent=FBgn0083963.mrna1;Target=FBgn0083963 1 857 +
Chr2	stalkie_big_nohaplotig	exon	93921909	93922072	100	+	.	Parent=FBgn0083963.mrna1;Target=FBgn0083963 858 1021 +
Chr2	stalkie_big_nohaplotig	exon	94164825	94164850	46	+	.	Parent=FBgn0083963.mrna1;Target=FBgn0083963 1231 1251 +
Chr2	stalkie_big_nohaplotig	exon	94165973	94165979	100	+	.	Parent=FBgn0083963.mrna1;Target=FBgn0083963 1252 1258 +
Chr2	stalkie_big_nohaplotig	exon	94187639	94187682	61	+	.	Parent=FBgn0083963.mrna1;Target=FBgn0083963 1259 1300 +
Chr2	stalkie_big_nohaplotig	exon	94190634	94190639	100	+	.	Parent=FBgn0083963.mrna1;Target=FBgn0083963 1306 1311 +
Chr2	stalkie_big_nohaplotig	exon	94193983	94193986	100	+	.	Parent=FBgn0083963.mrna1;Target=FBgn0083963 1312 1315 +
Chr2	stalkie_big_nohaplotig	exon	94196623	94196649	96	+	.	Parent=FBgn0083963.mrna1;Target=FBgn0083963 1316 1342 +
Chr2	stalkie_big_nohaplotig	CDS	93148441	93148620	98	+	0	Parent=FBgn0083963.mrna1;Target=FBgn0083963 1 180 +
Chr2	stalkie_big_nohaplotig	CDS	93150973	93151124	99	+	0	Parent=FBgn0083963.mrna1;Target=FBgn0083963 181 332 +
Chr2	stalkie_big_nohaplotig	CDS	93151571	93151683	100	+	2	Parent=FBgn0083963.mrna1;Target=FBgn0083963 333 445 +
Chr2	stalkie_big_nohaplotig	CDS	93151830	93152692	99	+	1	Parent=FBgn0083963.mrna1;Target=FBgn0083963 446 1308 +
Chr2	stalkie_big_nohaplotig	CDS	93905978	93906834	100	+	0	Parent=FBgn0083963.mrna1;Target=FBgn0083963 1 857 +
Chr2	stalkie_big_nohaplotig	CDS	93921909	93922072	100	+	2	Parent=FBgn0083963.mrna1;Target=FBgn0083963 858 1021 +
Chr2	stalkie_big_nohaplotig	CDS	94164825	94164850	46	+	0	Parent=FBgn0083963.mrna1;Target=FBgn0083963 1231 1251 +
Chr2	stalkie_big_nohaplotig	CDS	94165973	94165979	100	+	0	Parent=FBgn0083963.mrna1;Target=FBgn0083963 1252 1258 +
Chr2	stalkie_big_nohaplotig	CDS	94187639	94187682	61	+	1	Parent=FBgn0083963.mrna1;Target=FBgn0083963 1259 1300 +
Chr2	stalkie_big_nohaplotig	CDS	94190634	94190639	100	+	0	Parent=FBgn0083963.mrna1;Target=FBgn0083963 1306 1311 +
Chr2	stalkie_big_nohaplotig	CDS	94193983	94193986	100	+	0	Parent=FBgn0083963.mrna1;Target=FBgn0083963 1312 1315 +
Chr2	stalkie_big_nohaplotig	CDS	94196623	94196648	96	+	1	Parent=FBgn0083963.mrna1;Target=FBgn0083963 1316 1341 +
Chr2	stalkie_big_nohaplotig	mRNA	94196142	94196591	.	+	.	ID=comp145434_c0_seq1.mrna1;geneID=comp145434_c0_seq1.path1;Name=comp145434_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=385;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019519
Chr2	stalkie_big_nohaplotig	exon	94196142	94196316	100	+	.	Parent=comp145434_c0_seq1.mrna1;Target=comp145434_c0_seq1 211 385 -
Chr2	stalkie_big_nohaplotig	exon	94196382	94196591	100	+	.	Parent=comp145434_c0_seq1.mrna1;Target=comp145434_c0_seq1 1 210 -
Chr2	stalkie_big_nohaplotig	CDS	94196143	94196316	.	+	0	Parent=comp145434_c0_seq1.mrna1;Target=comp145434_c0_seq1 211 384 .
Chr2	stalkie_big_nohaplotig	CDS	94196382	94196591	.	+	0	Parent=comp145434_c0_seq1.mrna1;Target=comp145434_c0_seq1 1 210 .
Chr2	stalkie_big_nohaplotig	mRNA	94196398	94203759	.	+	.	ID=FBgn0015569.1.mrna1;geneID=FBgn0015569.1.path1;Name=FBgn0015569.1;Dir=sensecoverage=77.0;identity=96.7;matches=1275;mismatches=44;indels=0;unknowns=0;locus=RLOC_00019519
Chr2	stalkie_big_nohaplotig	exon	94196398	94196640	82	+	.	Parent=FBgn0015569.1.mrna1;Target=FBgn0015569.1 395 637 +
Chr2	stalkie_big_nohaplotig	exon	94202033	94202488	99	+	.	Parent=FBgn0015569.1.mrna1;Target=FBgn0015569.1 638 1093 +
Chr2	stalkie_big_nohaplotig	exon	94202559	94202734	100	+	.	Parent=FBgn0015569.1.mrna1;Target=FBgn0015569.1 1094 1269 +
Chr2	stalkie_big_nohaplotig	exon	94203316	94203759	100	+	.	Parent=FBgn0015569.1.mrna1;Target=FBgn0015569.1 1270 1713 +
Chr2	stalkie_big_nohaplotig	CDS	94196400	94196640	.	+	0	Parent=FBgn0015569.1.mrna1;Target=FBgn0015569.1 397 637 +
Chr2	stalkie_big_nohaplotig	CDS	94202033	94202488	.	+	2	Parent=FBgn0015569.1.mrna1;Target=FBgn0015569.1 638 1093 +
Chr2	stalkie_big_nohaplotig	CDS	94202559	94202734	.	+	2	Parent=FBgn0015569.1.mrna1;Target=FBgn0015569.1 1094 1269 +
Chr2	stalkie_big_nohaplotig	CDS	94203316	94203759	.	+	0	Parent=FBgn0015569.1.mrna1;Target=FBgn0015569.1 1270 1713 +
Chr2	gffcl	locus	93154756	93155296	.	+	.	ID=RLOC_00019520;geneIDs=comp119053_c0_seq1.path1;transcripts=comp119053_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93154756	93155296	.	+	.	ID=comp119053_c0_seq1.mrna1;geneID=comp119053_c0_seq1.path1;Name=comp119053_c0_seq1;Dir=indeterminatecoverage=95.8;identity=99.4;matches=538;mismatches=3;indels=0;unknowns=0;Target=comp119053_c0_seq1 564 24 .;CDS_Target=comp119053_c0_seq1 192 25 .;locus=RLOC_00019520
Chr2	stalkie_big_nohaplotig	exon	93154756	93155296	99	+	.	Parent=comp119053_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	93154757	93154924	.	+	0	Parent=comp119053_c0_seq1.mrna1
Chr2	gffcl	locus	93164557	93165462	.	-	.	ID=RLOC_00019521;geneIDs=ORF2159.path1;transcripts=ORF2159.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93164557	93165462	.	-	.	ID=ORF2159.mrna1;geneID=ORF2159.path1;Name=ORF2159;Dir=indeterminatecoverage=100.0;identity=97.1;matches=880;mismatches=26;indels=0;unknowns=0;Target=ORF2159 906 1 .;locus=RLOC_00019521
Chr2	stalkie_big_nohaplotig	exon	93164557	93165462	97	-	.	Parent=ORF2159.mrna1
Chr2	stalkie_big_nohaplotig	CDS	93164557	93165462	.	-	0	Parent=ORF2159.mrna1
Chr2	gffcl	locus	93197205	93198406	.	+	.	ID=RLOC_00019522;geneIDs=comp152179_c0_seq1.path1;transcripts=comp152179_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93197205	93198406	.	+	.	ID=comp152179_c0_seq1.mrna1;geneID=comp152179_c0_seq1.path1;Name=comp152179_c0_seq1;Dir=sensecoverage=98.9;identity=99.3;matches=975;mismatches=7;indels=0;unknowns=0;locus=RLOC_00019522
Chr2	stalkie_big_nohaplotig	exon	93197205	93197364	98	+	.	Parent=comp152179_c0_seq1.mrna1;Target=comp152179_c0_seq1 11 170 +
Chr2	stalkie_big_nohaplotig	exon	93197455	93197642	100	+	.	Parent=comp152179_c0_seq1.mrna1;Target=comp152179_c0_seq1 171 358 +
Chr2	stalkie_big_nohaplotig	exon	93197714	93198144	99	+	.	Parent=comp152179_c0_seq1.mrna1;Target=comp152179_c0_seq1 359 789 +
Chr2	stalkie_big_nohaplotig	exon	93198204	93198406	99	+	.	Parent=comp152179_c0_seq1.mrna1;Target=comp152179_c0_seq1 790 992 +
Chr2	stalkie_big_nohaplotig	CDS	93197462	93197642	.	+	0	Parent=comp152179_c0_seq1.mrna1;Target=comp152179_c0_seq1 178 358 +
Chr2	stalkie_big_nohaplotig	CDS	93197714	93198129	.	+	2	Parent=comp152179_c0_seq1.mrna1;Target=comp152179_c0_seq1 359 774 +
Chr2	gffcl	locus	93232182	93234866	.	-	.	ID=RLOC_00019523;geneIDs=comp154979_c0_seq1.path1;transcripts=comp154979_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93232182	93234866	.	-	.	ID=comp154979_c0_seq1.mrna1;geneID=comp154979_c0_seq1.path1;Name=comp154979_c0_seq1;Dir=antisensecoverage=99.8;identity=96.0;matches=809;mismatches=28;indels=6;unknowns=0;locus=RLOC_00019523
Chr2	stalkie_big_nohaplotig	exon	93232182	93232377	84	-	.	Parent=comp154979_c0_seq1.mrna1;Target=comp154979_c0_seq1 3 192 -
Chr2	stalkie_big_nohaplotig	exon	93232464	93232568	100	-	.	Parent=comp154979_c0_seq1.mrna1;Target=comp154979_c0_seq1 193 297 -
Chr2	stalkie_big_nohaplotig	exon	93232649	93232782	98	-	.	Parent=comp154979_c0_seq1.mrna1;Target=comp154979_c0_seq1 298 431 -
Chr2	stalkie_big_nohaplotig	exon	93234405	93234589	99	-	.	Parent=comp154979_c0_seq1.mrna1;Target=comp154979_c0_seq1 432 616 -
Chr2	stalkie_big_nohaplotig	exon	93234644	93234866	100	-	.	Parent=comp154979_c0_seq1.mrna1;Target=comp154979_c0_seq1 617 839 -
Chr2	stalkie_big_nohaplotig	CDS	93232183	93232377	.	-	0	Parent=comp154979_c0_seq1.mrna1;Target=comp154979_c0_seq1 4 192 .
Chr2	stalkie_big_nohaplotig	CDS	93232464	93232568	.	-	0	Parent=comp154979_c0_seq1.mrna1;Target=comp154979_c0_seq1 193 297 .
Chr2	stalkie_big_nohaplotig	CDS	93232649	93232782	.	-	2	Parent=comp154979_c0_seq1.mrna1;Target=comp154979_c0_seq1 298 431 .
Chr2	stalkie_big_nohaplotig	CDS	93234405	93234567	.	-	0	Parent=comp154979_c0_seq1.mrna1;Target=comp154979_c0_seq1 432 594 .
Chr2	gffcl	locus	93241545	93246233	.	-	.	ID=RLOC_00019524;geneIDs=FBgn0038211.3.path1;transcripts=FBgn0038211.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93241545	93246233	.	-	.	ID=FBgn0038211.3.mrna1;geneID=FBgn0038211.3.path1;Name=FBgn0038211.3;Dir=sensecoverage=100.0;identity=99.9;matches=1714;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019524
Chr2	stalkie_big_nohaplotig	exon	93241545	93241962	100	-	.	Parent=FBgn0038211.3.mrna1;Target=FBgn0038211.3 1299 1716 +
Chr2	stalkie_big_nohaplotig	exon	93242019	93242496	99	-	.	Parent=FBgn0038211.3.mrna1;Target=FBgn0038211.3 821 1298 +
Chr2	stalkie_big_nohaplotig	exon	93243011	93243173	100	-	.	Parent=FBgn0038211.3.mrna1;Target=FBgn0038211.3 658 820 +
Chr2	stalkie_big_nohaplotig	exon	93243242	93243489	100	-	.	Parent=FBgn0038211.3.mrna1;Target=FBgn0038211.3 410 657 +
Chr2	stalkie_big_nohaplotig	exon	93243548	93243710	100	-	.	Parent=FBgn0038211.3.mrna1;Target=FBgn0038211.3 247 409 +
Chr2	stalkie_big_nohaplotig	exon	93245988	93246233	100	-	.	Parent=FBgn0038211.3.mrna1;Target=FBgn0038211.3 1 246 +
Chr2	stalkie_big_nohaplotig	CDS	93241545	93241962	.	-	1	Parent=FBgn0038211.3.mrna1;Target=FBgn0038211.3 1299 1716 +
Chr2	stalkie_big_nohaplotig	CDS	93242019	93242496	.	-	2	Parent=FBgn0038211.3.mrna1;Target=FBgn0038211.3 821 1298 +
Chr2	stalkie_big_nohaplotig	CDS	93243011	93243173	.	-	0	Parent=FBgn0038211.3.mrna1;Target=FBgn0038211.3 658 820 +
Chr2	stalkie_big_nohaplotig	CDS	93243242	93243489	.	-	2	Parent=FBgn0038211.3.mrna1;Target=FBgn0038211.3 410 657 +
Chr2	stalkie_big_nohaplotig	CDS	93243548	93243710	.	-	0	Parent=FBgn0038211.3.mrna1;Target=FBgn0038211.3 247 409 +
Chr2	stalkie_big_nohaplotig	CDS	93245988	93246233	.	-	0	Parent=FBgn0038211.3.mrna1;Target=FBgn0038211.3 1 246 +
Chr2	gffcl	locus	93255729	93256217	.	-	.	ID=RLOC_00019526;geneIDs=comp146962_c2_seq1.path1;transcripts=comp146962_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93255729	93256217	.	-	.	ID=comp146962_c2_seq1.mrna1;geneID=comp146962_c2_seq1.path1;Name=comp146962_c2_seq1;Dir=indeterminatecoverage=100.0;identity=84.8;matches=423;mismatches=22;indels=54;unknowns=0;Target=comp146962_c2_seq1 455 1 .;CDS_Target=comp146962_c2_seq1 378 325 .;locus=RLOC_00019526
Chr2	stalkie_big_nohaplotig	exon	93255729	93256217	84	-	.	Parent=comp146962_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	93255842	93255895	.	-	0	Parent=comp146962_c2_seq1.mrna1
Chr2	gffcl	locus	93257257	93258331	.	+	.	ID=RLOC_00019527;geneIDs=comp156097_c0_seq1.path1;transcripts=comp156097_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93257257	93258331	.	+	.	ID=comp156097_c0_seq1.mrna1;geneID=comp156097_c0_seq1.path1;Name=comp156097_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.9;matches=1074;mismatches=1;indels=0;unknowns=0;Target=comp156097_c0_seq1 1075 1 .;CDS_Target=comp156097_c0_seq1 949 296 .;locus=RLOC_00019527
Chr2	stalkie_big_nohaplotig	exon	93257257	93258331	99	+	.	Parent=comp156097_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	93257552	93258205	.	+	0	Parent=comp156097_c0_seq1.mrna1
Chr2	gffcl	locus	93272293	93273073	.	+	.	ID=RLOC_00019528;geneIDs=comp155273_c0_seq1.path1;transcripts=comp155273_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93272293	93273073	.	+	.	ID=comp155273_c0_seq1.mrna1;geneID=comp155273_c0_seq1.path1;Name=comp155273_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.4;matches=776;mismatches=5;indels=0;unknowns=0;Target=comp155273_c0_seq1 782 2 .;CDS_Target=comp155273_c0_seq1 403 254 .;locus=RLOC_00019528
Chr2	stalkie_big_nohaplotig	exon	93272293	93273073	99	+	.	Parent=comp155273_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	93272545	93272694	.	+	0	Parent=comp155273_c0_seq1.mrna1
Chr2	gffcl	locus	93316424	93317449	.	-	.	ID=RLOC_00019529;geneIDs=comp153237_c0_seq1.path1;transcripts=comp153237_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93316424	93317449	.	-	.	ID=comp153237_c0_seq1.mrna1;geneID=comp153237_c0_seq1.path1;Name=comp153237_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=1005;mismatches=11;indels=10;unknowns=0;Target=comp153237_c0_seq1 1016 1 .;CDS_Target=comp153237_c0_seq1 35 3 .;locus=RLOC_00019529
Chr2	stalkie_big_nohaplotig	exon	93316424	93317449	97	-	.	Parent=comp153237_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	93317415	93317447	.	-	0	Parent=comp153237_c0_seq1.mrna1
Chr2	gffcl	locus	93319467	93330014	.	-	.	ID=RLOC_00019530;geneIDs=FBgn0037515.1.path1;transcripts=FBgn0037515.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93319467	93330014	.	-	.	ID=FBgn0037515.1.mrna1;geneID=FBgn0037515.1.path1;Name=FBgn0037515.1;Dir=sensecoverage=100.0;identity=99.9;matches=1169;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019530
Chr2	stalkie_big_nohaplotig	exon	93319467	93319768	100	-	.	Parent=FBgn0037515.1.mrna1;Target=FBgn0037515.1 869 1170 +
Chr2	stalkie_big_nohaplotig	exon	93319963	93320249	100	-	.	Parent=FBgn0037515.1.mrna1;Target=FBgn0037515.1 582 868 +
Chr2	stalkie_big_nohaplotig	exon	93320421	93320529	100	-	.	Parent=FBgn0037515.1.mrna1;Target=FBgn0037515.1 473 581 +
Chr2	stalkie_big_nohaplotig	exon	93322381	93322773	100	-	.	Parent=FBgn0037515.1.mrna1;Target=FBgn0037515.1 80 472 +
Chr2	stalkie_big_nohaplotig	exon	93329936	93330014	98	-	.	Parent=FBgn0037515.1.mrna1;Target=FBgn0037515.1 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	93319467	93319768	.	-	2	Parent=FBgn0037515.1.mrna1;Target=FBgn0037515.1 869 1170 +
Chr2	stalkie_big_nohaplotig	CDS	93319963	93320249	.	-	1	Parent=FBgn0037515.1.mrna1;Target=FBgn0037515.1 582 868 +
Chr2	stalkie_big_nohaplotig	CDS	93320421	93320529	.	-	2	Parent=FBgn0037515.1.mrna1;Target=FBgn0037515.1 473 581 +
Chr2	stalkie_big_nohaplotig	CDS	93322381	93322773	.	-	2	Parent=FBgn0037515.1.mrna1;Target=FBgn0037515.1 80 472 +
Chr2	stalkie_big_nohaplotig	CDS	93329936	93330014	.	-	0	Parent=FBgn0037515.1.mrna1;Target=FBgn0037515.1 1 79 +
Chr2	gffcl	locus	93426886	93427710	.	-	.	ID=RLOC_00019531;geneIDs=comp147241_c0_seq1.path1;transcripts=comp147241_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93426886	93427710	.	-	.	ID=comp147241_c0_seq1.mrna1;geneID=comp147241_c0_seq1.path1;Name=comp147241_c0_seq1;Dir=sensecoverage=99.4;identity=99.6;matches=768;mismatches=3;indels=0;unknowns=0;Target=comp147241_c0_seq1 163 576 +;locus=RLOC_00019531
Chr2	stalkie_big_nohaplotig	exon	93426886	93427524	99	-	.	Parent=comp147241_c0_seq1.mrna1;Target=comp147241_c0_seq1 138 776 +
Chr2	stalkie_big_nohaplotig	exon	93427579	93427710	98	-	.	Parent=comp147241_c0_seq1.mrna1;Target=comp147241_c0_seq1 6 137 +
Chr2	stalkie_big_nohaplotig	CDS	93427086	93427499	.	-	0	Parent=comp147241_c0_seq1.mrna1
Chr2	gffcl	locus	93452367	95236417	.	-	.	ID=RLOC_00019532;geneIDs=comp156773_c0_seq1.path1;transcripts=comp156773_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93452367	95236417	.	-	.	ID=comp156773_c0_seq1.mrna1;geneID=comp156773_c0_seq1.path1;Name=comp156773_c0_seq1;Dir=indeterminatecoverage=94.7;identity=99.5;matches=791;mismatches=4;indels=0;unknowns=0;Target=comp156773_c0_seq1 731 615 .;locus=RLOC_00019532
Chr2	stalkie_big_nohaplotig	exon	93452367	93452372	100	-	.	Parent=comp156773_c0_seq1.mrna1;Target=comp156773_c0_seq1 912 907 .
Chr2	stalkie_big_nohaplotig	exon	93459208	93459210	100	-	.	Parent=comp156773_c0_seq1.mrna1;Target=comp156773_c0_seq1 906 904 .
Chr2	stalkie_big_nohaplotig	exon	93461737	93461738	100	-	.	Parent=comp156773_c0_seq1.mrna1;Target=comp156773_c0_seq1 903 902 .
Chr2	stalkie_big_nohaplotig	exon	93463685	93463687	100	-	.	Parent=comp156773_c0_seq1.mrna1;Target=comp156773_c0_seq1 901 899 .
Chr2	stalkie_big_nohaplotig	exon	93471197	93471203	100	-	.	Parent=comp156773_c0_seq1.mrna1;Target=comp156773_c0_seq1 898 892 .
Chr2	stalkie_big_nohaplotig	exon	93477498	93477499	100	-	.	Parent=comp156773_c0_seq1.mrna1;Target=comp156773_c0_seq1 891 890 .
Chr2	stalkie_big_nohaplotig	exon	93477782	93477783	100	-	.	Parent=comp156773_c0_seq1.mrna1;Target=comp156773_c0_seq1 889 888 .
Chr2	stalkie_big_nohaplotig	exon	95235644	95236126	99	-	.	Parent=comp156773_c0_seq1.mrna1;Target=comp156773_c0_seq1 887 405 .
Chr2	stalkie_big_nohaplotig	exon	95236131	95236417	98	-	.	Parent=comp156773_c0_seq1.mrna1;Target=comp156773_c0_seq1 287 1 .
Chr2	stalkie_big_nohaplotig	CDS	95235800	95235916	.	-	0	Parent=comp156773_c0_seq1.mrna1
Chr2	gffcl	locus	93503097	93504242	.	+	.	ID=RLOC_00019533;geneIDs=comp158785_c0_seq1.path2;transcripts=comp158785_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	93503097	93504242	.	+	.	ID=comp158785_c0_seq1.mrna2;geneID=comp158785_c0_seq1.path2;Name=comp158785_c0_seq1;Dir=indeterminatecoverage=99.9;identity=94.7;matches=1125;mismatches=15;indels=48;unknowns=0;Target=comp158785_c0_seq1 1183 2 .;CDS_Target=comp158785_c0_seq1 874 608 .;locus=RLOC_00019533
Chr2	stalkie_big_nohaplotig	exon	93503097	93504242	94	+	.	Parent=comp158785_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	93503667	93503933	.	+	0	Parent=comp158785_c0_seq1.mrna2
Chr2	gffcl	locus	93504531	93505196	.	-	.	ID=RLOC_00019534;geneIDs=comp154128_c0_seq1.path1;transcripts=comp154128_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93504531	93505196	.	-	.	ID=comp154128_c0_seq1.mrna1;geneID=comp154128_c0_seq1.path1;Name=comp154128_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=662;mismatches=2;indels=3;unknowns=0;Target=comp154128_c0_seq1 665 1 .;CDS_Target=comp154128_c0_seq1 367 80 .;locus=RLOC_00019534
Chr2	stalkie_big_nohaplotig	exon	93504531	93505196	99	-	.	Parent=comp154128_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	93504830	93505117	.	-	0	Parent=comp154128_c0_seq1.mrna1
Chr2	gffcl	locus	93511236	93511829	.	-	.	ID=RLOC_00019535;geneIDs=comp139859_c0_seq1.path1;transcripts=comp139859_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93511236	93511829	.	-	.	ID=comp139859_c0_seq1.mrna1;geneID=comp139859_c0_seq1.path1;Name=comp139859_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=589;mismatches=5;indels=0;unknowns=0;Target=comp139859_c0_seq1 594 1 .;CDS_Target=comp139859_c0_seq1 246 109 .;locus=RLOC_00019535
Chr2	stalkie_big_nohaplotig	exon	93511236	93511829	99	-	.	Parent=comp139859_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	93511584	93511721	.	-	0	Parent=comp139859_c0_seq1.mrna1
Chr2	gffcl	locus	93535070	93536434	.	+	.	ID=RLOC_00019536;geneIDs=ORF2394.path1,comp156695_c0_seq1.path1;transcripts=comp156695_c0_seq1.mrna1,ORF2394.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93535070	93536434	.	+	.	ID=comp156695_c0_seq1.mrna1;geneID=comp156695_c0_seq1.path1;Name=comp156695_c0_seq1;Dir=sensecoverage=99.8;identity=99.7;matches=1285;mismatches=4;indels=0;unknowns=0;Target=comp156695_c0_seq1 779 1120 +;locus=RLOC_00019536
Chr2	stalkie_big_nohaplotig	exon	93535070	93535706	99	+	.	Parent=comp156695_c0_seq1.mrna1;Target=comp156695_c0_seq1 2 638 +
Chr2	stalkie_big_nohaplotig	exon	93535783	93536434	99	+	.	Parent=comp156695_c0_seq1.mrna1;Target=comp156695_c0_seq1 639 1290 +
Chr2	stalkie_big_nohaplotig	CDS	93535923	93536264	.	+	0	Parent=comp156695_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93535221	93536261	.	+	.	ID=ORF2394.mrna1;geneID=ORF2394.path1;Name=ORF2394;Dir=sensecoverage=100.0;identity=99.3;matches=861;mismatches=6;indels=0;unknowns=0;locus=RLOC_00019536
Chr2	stalkie_big_nohaplotig	exon	93535221	93535458	99	+	.	Parent=ORF2394.mrna1;Target=ORF2394 1 238 +
Chr2	stalkie_big_nohaplotig	exon	93535518	93535706	98	+	.	Parent=ORF2394.mrna1;Target=ORF2394 239 427 +
Chr2	stalkie_big_nohaplotig	exon	93535822	93536261	99	+	.	Parent=ORF2394.mrna1;Target=ORF2394 428 867 +
Chr2	stalkie_big_nohaplotig	CDS	93535221	93535458	.	+	0	Parent=ORF2394.mrna1;Target=ORF2394 1 238 +
Chr2	stalkie_big_nohaplotig	CDS	93535518	93535706	.	+	2	Parent=ORF2394.mrna1;Target=ORF2394 239 427 +
Chr2	stalkie_big_nohaplotig	CDS	93535822	93536261	.	+	2	Parent=ORF2394.mrna1;Target=ORF2394 428 867 +
Chr2	gffcl	locus	93538349	93539278	.	+	.	ID=RLOC_00019537;geneIDs=ORF2048.path1;transcripts=ORF2048.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93538349	93539278	.	+	.	ID=ORF2048.mrna1;geneID=ORF2048.path1;Name=ORF2048;Dir=indeterminatecoverage=100.0;identity=99.5;matches=925;mismatches=5;indels=0;unknowns=0;Target=ORF2048 930 1 .;locus=RLOC_00019537
Chr2	stalkie_big_nohaplotig	exon	93538349	93539278	99	+	.	Parent=ORF2048.mrna1
Chr2	stalkie_big_nohaplotig	CDS	93538349	93539278	.	+	0	Parent=ORF2048.mrna1
Chr2	gffcl	locus	93591832	93594843	.	+	.	ID=RLOC_00019538;geneIDs=comp162306_c0_seq1.path1;transcripts=comp162306_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93591832	93594843	.	+	.	ID=comp162306_c0_seq1.mrna1;geneID=comp162306_c0_seq1.path1;Name=comp162306_c0_seq1;Dir=antisensecoverage=99.8;identity=92.8;matches=2518;mismatches=81;indels=115;unknowns=0;locus=RLOC_00019538
Chr2	stalkie_big_nohaplotig	exon	93591832	93592386	97	+	.	Parent=comp162306_c0_seq1.mrna1;Target=comp162306_c0_seq1 2161 2715 -
Chr2	stalkie_big_nohaplotig	exon	93592796	93594843	91	+	.	Parent=comp162306_c0_seq1.mrna1;Target=comp162306_c0_seq1 6 2160 -
Chr2	stalkie_big_nohaplotig	CDS	93591834	93592386	.	+	0	Parent=comp162306_c0_seq1.mrna1;Target=comp162306_c0_seq1 2161 2713 .
Chr2	stalkie_big_nohaplotig	CDS	93592796	93593189	.	+	2	Parent=comp162306_c0_seq1.mrna1;Target=comp162306_c0_seq1 1661 2160 .
Chr2	gffcl	locus	93643791	93644562	.	.	.	ID=RLOC_00019539;geneIDs=FBgn0039359.1.path1,comp135778_c0_seq1.path1;transcripts=FBgn0039359.1.mrna1,comp135778_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93643791	93644562	.	-	.	ID=FBgn0039359.1.mrna1;geneID=FBgn0039359.1.path1;Name=FBgn0039359.1;Dir=sensecoverage=100.0;identity=100.0;matches=468;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019539
Chr2	stalkie_big_nohaplotig	exon	93643791	93644211	100	-	.	Parent=FBgn0039359.1.mrna1;Target=FBgn0039359.1 48 468 +
Chr2	stalkie_big_nohaplotig	exon	93644516	93644562	100	-	.	Parent=FBgn0039359.1.mrna1;Target=FBgn0039359.1 1 47 +
Chr2	stalkie_big_nohaplotig	CDS	93643791	93644211	.	-	1	Parent=FBgn0039359.1.mrna1;Target=FBgn0039359.1 48 468 +
Chr2	stalkie_big_nohaplotig	CDS	93644516	93644562	.	-	0	Parent=FBgn0039359.1.mrna1;Target=FBgn0039359.1 1 47 +
Chr2	stalkie_big_nohaplotig	mRNA	93644217	93644532	.	+	.	ID=comp135778_c0_seq1.mrna1;geneID=comp135778_c0_seq1.path1;Name=comp135778_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=316;mismatches=0;indels=0;unknowns=0;Target=comp135778_c0_seq1 316 1 .;CDS_Target=comp135778_c0_seq1 77 3 .;locus=RLOC_00019539
Chr2	stalkie_big_nohaplotig	exon	93644217	93644532	100	+	.	Parent=comp135778_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	93644219	93644293	.	+	0	Parent=comp135778_c0_seq1.mrna1
Chr2	gffcl	locus	93644671	93644939	.	+	.	ID=RLOC_00019540;geneIDs=comp135905_c0_seq1.path1;transcripts=comp135905_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93644671	93644939	.	+	.	ID=comp135905_c0_seq1.mrna1;geneID=comp135905_c0_seq1.path1;Name=comp135905_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=269;mismatches=0;indels=0;unknowns=0;Target=comp135905_c0_seq1 269 1 .;CDS_Target=comp135905_c0_seq1 79 2 .;locus=RLOC_00019540
Chr2	stalkie_big_nohaplotig	exon	93644671	93644939	100	+	.	Parent=comp135905_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	93644672	93644749	.	+	0	Parent=comp135905_c0_seq1.mrna1
Chr2	gffcl	locus	93646604	93647388	.	-	.	ID=RLOC_00019541;geneIDs=comp136324_c2_seq1.path1;transcripts=comp136324_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93646604	93647388	.	-	.	ID=comp136324_c2_seq1.mrna1;geneID=comp136324_c2_seq1.path1;Name=comp136324_c2_seq1;Dir=indeterminatecoverage=97.6;identity=99.7;matches=783;mismatches=2;indels=0;unknowns=0;Target=comp136324_c2_seq1 785 1 .;CDS_Target=comp136324_c2_seq1 558 1 .;locus=RLOC_00019541
Chr2	stalkie_big_nohaplotig	exon	93646604	93647388	99	-	.	Parent=comp136324_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	93646831	93647388	.	-	0	Parent=comp136324_c2_seq1.mrna1
Chr2	gffcl	locus	93693074	93694710	.	-	.	ID=RLOC_00019545;geneIDs=ORF585.path3;transcripts=ORF585.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	93693074	93694710	.	-	.	ID=ORF585.mrna3;geneID=ORF585.path3;Name=ORF585;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1627;mismatches=10;indels=1;unknowns=0;Target=ORF585 1638 1 .;locus=RLOC_00019545
Chr2	stalkie_big_nohaplotig	exon	93693074	93694710	99	-	.	Parent=ORF585.mrna3
Chr2	stalkie_big_nohaplotig	CDS	93693074	93694710	.	-	0	Parent=ORF585.mrna3
Chr2	gffcl	locus	93709379	93710298	.	+	.	ID=RLOC_00019546;geneIDs=comp158366_c0_seq1.path1;transcripts=comp158366_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93709379	93710298	.	+	.	ID=comp158366_c0_seq1.mrna1;geneID=comp158366_c0_seq1.path1;Name=comp158366_c0_seq1;Dir=sensecoverage=99.1;identity=99.3;matches=852;mismatches=6;indels=0;unknowns=0;Target=comp158366_c0_seq1 187 717 +;locus=RLOC_00019546
Chr2	stalkie_big_nohaplotig	exon	93709379	93709553	98	+	.	Parent=comp158366_c0_seq1.mrna1;Target=comp158366_c0_seq1 7 181 +
Chr2	stalkie_big_nohaplotig	exon	93709616	93710298	99	+	.	Parent=comp158366_c0_seq1.mrna1;Target=comp158366_c0_seq1 182 864 +
Chr2	stalkie_big_nohaplotig	CDS	93709621	93710151	.	+	0	Parent=comp158366_c0_seq1.mrna1
Chr2	gffcl	locus	93766350	93767555	.	-	.	ID=RLOC_00019547;geneIDs=comp154670_c0_seq1.path1;transcripts=comp154670_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93766350	93767555	.	-	.	ID=comp154670_c0_seq1.mrna1;geneID=comp154670_c0_seq1.path1;Name=comp154670_c0_seq1;Dir=antisensecoverage=98.9;identity=99.8;matches=1069;mismatches=2;indels=0;unknowns=0;Target=comp154670_c0_seq1 135 668 .;locus=RLOC_00019547
Chr2	stalkie_big_nohaplotig	exon	93766350	93767221	99	-	.	Parent=comp154670_c0_seq1.mrna1;Target=comp154670_c0_seq1 13 884 -
Chr2	stalkie_big_nohaplotig	exon	93767357	93767555	99	-	.	Parent=comp154670_c0_seq1.mrna1;Target=comp154670_c0_seq1 885 1083 -
Chr2	stalkie_big_nohaplotig	CDS	93766472	93767005	.	-	0	Parent=comp154670_c0_seq1.mrna1
Chr2	gffcl	locus	93770719	93772293	.	-	.	ID=RLOC_00019548;geneIDs=ORF642.path1;transcripts=ORF642.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93770719	93772293	.	-	.	ID=ORF642.mrna1;geneID=ORF642.path1;Name=ORF642;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1571;mismatches=4;indels=0;unknowns=0;Target=ORF642 1575 1 .;locus=RLOC_00019548
Chr2	stalkie_big_nohaplotig	exon	93770719	93772293	99	-	.	Parent=ORF642.mrna1
Chr2	stalkie_big_nohaplotig	CDS	93770719	93772293	.	-	0	Parent=ORF642.mrna1
Chr2	gffcl	locus	93793926	93794276	.	-	.	ID=RLOC_00019549;geneIDs=comp103691_c0_seq1.path1;transcripts=comp103691_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93793926	93794276	.	-	.	ID=comp103691_c0_seq1.mrna1;geneID=comp103691_c0_seq1.path1;Name=comp103691_c0_seq1;Dir=indeterminatecoverage=93.9;identity=99.7;matches=350;mismatches=1;indels=0;unknowns=0;Target=comp103691_c0_seq1 374 24 .;CDS_Target=comp103691_c0_seq1 320 249 .;locus=RLOC_00019549
Chr2	stalkie_big_nohaplotig	exon	93793926	93794276	99	-	.	Parent=comp103691_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	93793980	93794051	.	-	0	Parent=comp103691_c0_seq1.mrna1
Chr2	gffcl	locus	93804750	93819612	.	-	.	ID=RLOC_00019550;geneIDs=comp163072_c3_seq1.path2;transcripts=comp163072_c3_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	93804750	93819612	.	-	.	ID=comp163072_c3_seq1.mrna2;geneID=comp163072_c3_seq1.path2;Name=comp163072_c3_seq1;Dir=antisensecoverage=20.2;identity=100.0;matches=999;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019550
Chr2	stalkie_big_nohaplotig	exon	93804750	93804917	100	-	.	Parent=comp163072_c3_seq1.mrna2;Target=comp163072_c3_seq1 3676 3843 -
Chr2	stalkie_big_nohaplotig	exon	93805825	93805956	100	-	.	Parent=comp163072_c3_seq1.mrna2;Target=comp163072_c3_seq1 3844 3975 -
Chr2	stalkie_big_nohaplotig	exon	93818610	93818766	100	-	.	Parent=comp163072_c3_seq1.mrna2;Target=comp163072_c3_seq1 3976 4132 -
Chr2	stalkie_big_nohaplotig	exon	93818832	93819020	100	-	.	Parent=comp163072_c3_seq1.mrna2;Target=comp163072_c3_seq1 4133 4321 -
Chr2	stalkie_big_nohaplotig	exon	93819091	93819243	100	-	.	Parent=comp163072_c3_seq1.mrna2;Target=comp163072_c3_seq1 4322 4474 -
Chr2	stalkie_big_nohaplotig	exon	93819413	93819612	100	-	.	Parent=comp163072_c3_seq1.mrna2;Target=comp163072_c3_seq1 4475 4674 -
Chr2	stalkie_big_nohaplotig	CDS	93804750	93804917	.	-	1	Parent=comp163072_c3_seq1.mrna2;Target=comp163072_c3_seq1 3676 3843 .
Chr2	stalkie_big_nohaplotig	CDS	93805825	93805956	.	-	1	Parent=comp163072_c3_seq1.mrna2;Target=comp163072_c3_seq1 3844 3975 .
Chr2	stalkie_big_nohaplotig	CDS	93818610	93818766	.	-	2	Parent=comp163072_c3_seq1.mrna2;Target=comp163072_c3_seq1 3976 4132 .
Chr2	stalkie_big_nohaplotig	CDS	93818832	93819020	.	-	2	Parent=comp163072_c3_seq1.mrna2;Target=comp163072_c3_seq1 4133 4321 .
Chr2	stalkie_big_nohaplotig	CDS	93819091	93819243	.	-	2	Parent=comp163072_c3_seq1.mrna2;Target=comp163072_c3_seq1 4322 4474 .
Chr2	stalkie_big_nohaplotig	CDS	93819413	93819611	.	-	0	Parent=comp163072_c3_seq1.mrna2;Target=comp163072_c3_seq1 4475 4673 .
Chr2	gffcl	locus	93993203	93995336	.	+	.	ID=RLOC_00019553;geneIDs=FBgn0015568.2.path1;transcripts=FBgn0015568.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93993203	93995336	.	+	.	ID=FBgn0015568.2.mrna1;geneID=FBgn0015568.2.path1;Name=FBgn0015568.2;Dir=sensecoverage=99.5;identity=99.3;matches=1720;mismatches=12;indels=0;unknowns=0;locus=RLOC_00019553
Chr2	stalkie_big_nohaplotig	exon	93993203	93993271	97	+	.	Parent=FBgn0015568.2.mrna1;Target=FBgn0015568.2 9 77 +
Chr2	stalkie_big_nohaplotig	exon	93993462	93993777	99	+	.	Parent=FBgn0015568.2.mrna1;Target=FBgn0015568.2 78 393 +
Chr2	stalkie_big_nohaplotig	exon	93993847	93993997	99	+	.	Parent=FBgn0015568.2.mrna1;Target=FBgn0015568.2 394 544 +
Chr2	stalkie_big_nohaplotig	exon	93994058	93994800	99	+	.	Parent=FBgn0015568.2.mrna1;Target=FBgn0015568.2 545 1287 +
Chr2	stalkie_big_nohaplotig	exon	93994884	93995336	99	+	.	Parent=FBgn0015568.2.mrna1;Target=FBgn0015568.2 1288 1740 +
Chr2	stalkie_big_nohaplotig	CDS	93993204	93993271	.	+	0	Parent=FBgn0015568.2.mrna1;Target=FBgn0015568.2 10 77 +
Chr2	stalkie_big_nohaplotig	CDS	93993462	93993777	.	+	1	Parent=FBgn0015568.2.mrna1;Target=FBgn0015568.2 78 393 +
Chr2	stalkie_big_nohaplotig	CDS	93993847	93993997	.	+	0	Parent=FBgn0015568.2.mrna1;Target=FBgn0015568.2 394 544 +
Chr2	stalkie_big_nohaplotig	CDS	93994058	93994800	.	+	2	Parent=FBgn0015568.2.mrna1;Target=FBgn0015568.2 545 1287 +
Chr2	stalkie_big_nohaplotig	CDS	93994884	93995336	.	+	0	Parent=FBgn0015568.2.mrna1;Target=FBgn0015568.2 1288 1740 +
Chr2	gffcl	locus	93999343	94014895	.	+	.	ID=RLOC_00019554;geneIDs=FBgn0015568.1.path1;transcripts=FBgn0015568.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	93999343	94014895	.	+	.	ID=FBgn0015568.1.mrna1;geneID=FBgn0015568.1.path1;Name=FBgn0015568.1;Dir=sensecoverage=100.0;identity=99.9;matches=1718;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019554
Chr2	stalkie_big_nohaplotig	exon	93999343	93999398	100	+	.	Parent=FBgn0015568.1.mrna1;Target=FBgn0015568.1 1 56 +
Chr2	stalkie_big_nohaplotig	exon	94004362	94004677	100	+	.	Parent=FBgn0015568.1.mrna1;Target=FBgn0015568.1 57 372 +
Chr2	stalkie_big_nohaplotig	exon	94004739	94004889	100	+	.	Parent=FBgn0015568.1.mrna1;Target=FBgn0015568.1 373 523 +
Chr2	stalkie_big_nohaplotig	exon	94004952	94005694	99	+	.	Parent=FBgn0015568.1.mrna1;Target=FBgn0015568.1 524 1266 +
Chr2	stalkie_big_nohaplotig	exon	94014443	94014895	100	+	.	Parent=FBgn0015568.1.mrna1;Target=FBgn0015568.1 1267 1719 +
Chr2	stalkie_big_nohaplotig	CDS	93999343	93999398	.	+	0	Parent=FBgn0015568.1.mrna1;Target=FBgn0015568.1 1 56 +
Chr2	stalkie_big_nohaplotig	CDS	94004362	94004677	.	+	1	Parent=FBgn0015568.1.mrna1;Target=FBgn0015568.1 57 372 +
Chr2	stalkie_big_nohaplotig	CDS	94004739	94004889	.	+	0	Parent=FBgn0015568.1.mrna1;Target=FBgn0015568.1 373 523 +
Chr2	stalkie_big_nohaplotig	CDS	94004952	94005694	.	+	2	Parent=FBgn0015568.1.mrna1;Target=FBgn0015568.1 524 1266 +
Chr2	stalkie_big_nohaplotig	CDS	94014443	94014895	.	+	0	Parent=FBgn0015568.1.mrna1;Target=FBgn0015568.1 1267 1719 +
Chr2	gffcl	locus	94006455	94007737	.	-	.	ID=RLOC_00019555;geneIDs=comp66467_c0_seq1.path1;transcripts=comp66467_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94006455	94007737	.	-	.	ID=comp66467_c0_seq1.mrna1;geneID=comp66467_c0_seq1.path1;Name=comp66467_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1282;mismatches=1;indels=0;unknowns=0;Target=comp66467_c0_seq1 1283 1 .;CDS_Target=comp66467_c0_seq1 1248 904 .;locus=RLOC_00019555
Chr2	stalkie_big_nohaplotig	exon	94006455	94007737	99	-	.	Parent=comp66467_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	94006490	94006834	.	-	0	Parent=comp66467_c0_seq1.mrna1
Chr2	gffcl	locus	94015128	94016410	.	-	.	ID=RLOC_00019556;geneIDs=comp66467_c0_seq1.path2;transcripts=comp66467_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	94015128	94016410	.	-	.	ID=comp66467_c0_seq1.mrna2;geneID=comp66467_c0_seq1.path2;Name=comp66467_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1282;mismatches=1;indels=0;unknowns=0;Target=comp66467_c0_seq1 1283 1 .;CDS_Target=comp66467_c0_seq1 1248 904 .;locus=RLOC_00019556
Chr2	stalkie_big_nohaplotig	exon	94015128	94016410	99	-	.	Parent=comp66467_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	94015163	94015507	.	-	0	Parent=comp66467_c0_seq1.mrna2
Chr2	gffcl	locus	94022417	94028306	.	+	.	ID=RLOC_00019557;geneIDs=FBgn0261393.1.path1;transcripts=FBgn0261393.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94022417	94028306	.	+	.	ID=FBgn0261393.1.mrna1;geneID=FBgn0261393.1.path1;Name=FBgn0261393.1;Dir=sensecoverage=100.0;identity=100.0;matches=1644;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019557
Chr2	stalkie_big_nohaplotig	exon	94022417	94022439	100	+	.	Parent=FBgn0261393.1.mrna1;Target=FBgn0261393.1 1 23 +
Chr2	stalkie_big_nohaplotig	exon	94022512	94022788	100	+	.	Parent=FBgn0261393.1.mrna1;Target=FBgn0261393.1 24 300 +
Chr2	stalkie_big_nohaplotig	exon	94026585	94026735	100	+	.	Parent=FBgn0261393.1.mrna1;Target=FBgn0261393.1 301 451 +
Chr2	stalkie_big_nohaplotig	exon	94027052	94027779	100	+	.	Parent=FBgn0261393.1.mrna1;Target=FBgn0261393.1 452 1179 +
Chr2	stalkie_big_nohaplotig	exon	94027842	94028306	100	+	.	Parent=FBgn0261393.1.mrna1;Target=FBgn0261393.1 1180 1644 +
Chr2	stalkie_big_nohaplotig	CDS	94022417	94022439	.	+	0	Parent=FBgn0261393.1.mrna1;Target=FBgn0261393.1 1 23 +
Chr2	stalkie_big_nohaplotig	CDS	94022512	94022788	.	+	1	Parent=FBgn0261393.1.mrna1;Target=FBgn0261393.1 24 300 +
Chr2	stalkie_big_nohaplotig	CDS	94026585	94026735	.	+	0	Parent=FBgn0261393.1.mrna1;Target=FBgn0261393.1 301 451 +
Chr2	stalkie_big_nohaplotig	CDS	94027052	94027779	.	+	2	Parent=FBgn0261393.1.mrna1;Target=FBgn0261393.1 452 1179 +
Chr2	stalkie_big_nohaplotig	CDS	94027842	94028306	.	+	0	Parent=FBgn0261393.1.mrna1;Target=FBgn0261393.1 1180 1644 +
Chr2	gffcl	locus	94036725	94037580	.	+	.	ID=RLOC_00019558;geneIDs=ORF2943.path1;transcripts=ORF2943.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94036725	94037580	.	+	.	ID=ORF2943.mrna1;geneID=ORF2943.path1;Name=ORF2943;Dir=sensecoverage=100.0;identity=99.7;matches=784;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019558
Chr2	stalkie_big_nohaplotig	exon	94036725	94037370	99	+	.	Parent=ORF2943.mrna1;Target=ORF2943 1 646 +
Chr2	stalkie_big_nohaplotig	exon	94037441	94037580	100	+	.	Parent=ORF2943.mrna1;Target=ORF2943 647 786 +
Chr2	stalkie_big_nohaplotig	CDS	94036725	94037370	.	+	0	Parent=ORF2943.mrna1;Target=ORF2943 1 646 +
Chr2	stalkie_big_nohaplotig	CDS	94037441	94037580	.	+	2	Parent=ORF2943.mrna1;Target=ORF2943 647 786 +
Chr2	gffcl	locus	94047240	94049732	.	+	.	ID=RLOC_00019559;geneIDs=FBgn0261393.2.path1,comp119343_c0_seq1.path1;transcripts=FBgn0261393.2.mrna1,comp119343_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94047240	94049732	.	+	.	ID=FBgn0261393.2.mrna1;geneID=FBgn0261393.2.path1;Name=FBgn0261393.2;Dir=sensecoverage=100.0;identity=98.8;matches=1281;mismatches=15;indels=0;unknowns=0;locus=RLOC_00019559
Chr2	stalkie_big_nohaplotig	exon	94047240	94047259	100	+	.	Parent=FBgn0261393.2.mrna1;Target=FBgn0261393.2 1 20 +
Chr2	stalkie_big_nohaplotig	exon	94047371	94047647	99	+	.	Parent=FBgn0261393.2.mrna1;Target=FBgn0261393.2 21 297 +
Chr2	stalkie_big_nohaplotig	exon	94047846	94047996	98	+	.	Parent=FBgn0261393.2.mrna1;Target=FBgn0261393.2 298 448 +
Chr2	stalkie_big_nohaplotig	exon	94048519	94049252	99	+	.	Parent=FBgn0261393.2.mrna1;Target=FBgn0261393.2 449 1182 +
Chr2	stalkie_big_nohaplotig	exon	94049619	94049732	97	+	.	Parent=FBgn0261393.2.mrna1;Target=FBgn0261393.2 1183 1296 +
Chr2	stalkie_big_nohaplotig	CDS	94047240	94047259	.	+	0	Parent=FBgn0261393.2.mrna1;Target=FBgn0261393.2 1 20 +
Chr2	stalkie_big_nohaplotig	CDS	94047371	94047647	.	+	1	Parent=FBgn0261393.2.mrna1;Target=FBgn0261393.2 21 297 +
Chr2	stalkie_big_nohaplotig	CDS	94047846	94047996	.	+	0	Parent=FBgn0261393.2.mrna1;Target=FBgn0261393.2 298 448 +
Chr2	stalkie_big_nohaplotig	CDS	94048519	94049252	.	+	2	Parent=FBgn0261393.2.mrna1;Target=FBgn0261393.2 449 1182 +
Chr2	stalkie_big_nohaplotig	CDS	94049619	94049732	.	+	0	Parent=FBgn0261393.2.mrna1;Target=FBgn0261393.2 1183 1296 +
Chr2	stalkie_big_nohaplotig	mRNA	94047973	94048411	.	+	.	ID=comp119343_c0_seq1.mrna1;geneID=comp119343_c0_seq1.path1;Name=comp119343_c0_seq1;Dir=antisensecoverage=100.0;identity=97.9;matches=368;mismatches=8;indels=0;unknowns=0;locus=RLOC_00019559
Chr2	stalkie_big_nohaplotig	exon	94047973	94047996	100	+	.	Parent=comp119343_c0_seq1.mrna1;Target=comp119343_c0_seq1 353 376 -
Chr2	stalkie_big_nohaplotig	exon	94048060	94048411	97	+	.	Parent=comp119343_c0_seq1.mrna1;Target=comp119343_c0_seq1 1 352 -
Chr2	stalkie_big_nohaplotig	CDS	94047974	94047996	.	+	0	Parent=comp119343_c0_seq1.mrna1;Target=comp119343_c0_seq1 353 375 .
Chr2	stalkie_big_nohaplotig	CDS	94048060	94048141	.	+	1	Parent=comp119343_c0_seq1.mrna1;Target=comp119343_c0_seq1 271 352 .
Chr2	gffcl	locus	94068463	94074957	.	+	.	ID=RLOC_00019560;geneIDs=FBgn0015575.1.path1;transcripts=FBgn0015575.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94068463	94074957	.	+	.	ID=FBgn0015575.1.mrna1;geneID=FBgn0015575.1.path1;Name=FBgn0015575.1;Dir=sensecoverage=100.0;identity=100.0;matches=1737;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019560
Chr2	stalkie_big_nohaplotig	exon	94068463	94068530	100	+	.	Parent=FBgn0015575.1.mrna1;Target=FBgn0015575.1 1 68 +
Chr2	stalkie_big_nohaplotig	exon	94072543	94072855	100	+	.	Parent=FBgn0015575.1.mrna1;Target=FBgn0015575.1 69 381 +
Chr2	stalkie_big_nohaplotig	exon	94072909	94073059	100	+	.	Parent=FBgn0015575.1.mrna1;Target=FBgn0015575.1 382 532 +
Chr2	stalkie_big_nohaplotig	exon	94073130	94073693	100	+	.	Parent=FBgn0015575.1.mrna1;Target=FBgn0015575.1 533 1096 +
Chr2	stalkie_big_nohaplotig	exon	94074253	94074422	100	+	.	Parent=FBgn0015575.1.mrna1;Target=FBgn0015575.1 1097 1266 +
Chr2	stalkie_big_nohaplotig	exon	94074487	94074957	100	+	.	Parent=FBgn0015575.1.mrna1;Target=FBgn0015575.1 1267 1737 +
Chr2	stalkie_big_nohaplotig	CDS	94068463	94068530	.	+	0	Parent=FBgn0015575.1.mrna1;Target=FBgn0015575.1 1 68 +
Chr2	stalkie_big_nohaplotig	CDS	94072543	94072855	.	+	1	Parent=FBgn0015575.1.mrna1;Target=FBgn0015575.1 69 381 +
Chr2	stalkie_big_nohaplotig	CDS	94072909	94073059	.	+	0	Parent=FBgn0015575.1.mrna1;Target=FBgn0015575.1 382 532 +
Chr2	stalkie_big_nohaplotig	CDS	94073130	94073693	.	+	2	Parent=FBgn0015575.1.mrna1;Target=FBgn0015575.1 533 1096 +
Chr2	stalkie_big_nohaplotig	CDS	94074253	94074422	.	+	2	Parent=FBgn0015575.1.mrna1;Target=FBgn0015575.1 1097 1266 +
Chr2	stalkie_big_nohaplotig	CDS	94074487	94074957	.	+	0	Parent=FBgn0015575.1.mrna1;Target=FBgn0015575.1 1267 1737 +
Chr2	gffcl	locus	94080957	94087898	.	+	.	ID=RLOC_00019561;geneIDs=FBgn0015575.2.path1;transcripts=FBgn0015575.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94080957	94087898	.	+	.	ID=FBgn0015575.2.mrna1;geneID=FBgn0015575.2.path1;Name=FBgn0015575.2;Dir=sensecoverage=100.0;identity=100.0;matches=1725;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019561
Chr2	stalkie_big_nohaplotig	exon	94080957	94081015	100	+	.	Parent=FBgn0015575.2.mrna1;Target=FBgn0015575.2 1 59 +
Chr2	stalkie_big_nohaplotig	exon	94085981	94086293	100	+	.	Parent=FBgn0015575.2.mrna1;Target=FBgn0015575.2 60 372 +
Chr2	stalkie_big_nohaplotig	exon	94086352	94086502	100	+	.	Parent=FBgn0015575.2.mrna1;Target=FBgn0015575.2 373 523 +
Chr2	stalkie_big_nohaplotig	exon	94086567	94087127	100	+	.	Parent=FBgn0015575.2.mrna1;Target=FBgn0015575.2 524 1084 +
Chr2	stalkie_big_nohaplotig	exon	94087192	94087361	100	+	.	Parent=FBgn0015575.2.mrna1;Target=FBgn0015575.2 1085 1254 +
Chr2	stalkie_big_nohaplotig	exon	94087428	94087898	100	+	.	Parent=FBgn0015575.2.mrna1;Target=FBgn0015575.2 1255 1725 +
Chr2	stalkie_big_nohaplotig	CDS	94080957	94081015	.	+	0	Parent=FBgn0015575.2.mrna1;Target=FBgn0015575.2 1 59 +
Chr2	stalkie_big_nohaplotig	CDS	94085981	94086293	.	+	1	Parent=FBgn0015575.2.mrna1;Target=FBgn0015575.2 60 372 +
Chr2	stalkie_big_nohaplotig	CDS	94086352	94086502	.	+	0	Parent=FBgn0015575.2.mrna1;Target=FBgn0015575.2 373 523 +
Chr2	stalkie_big_nohaplotig	CDS	94086567	94087127	.	+	2	Parent=FBgn0015575.2.mrna1;Target=FBgn0015575.2 524 1084 +
Chr2	stalkie_big_nohaplotig	CDS	94087192	94087361	.	+	2	Parent=FBgn0015575.2.mrna1;Target=FBgn0015575.2 1085 1254 +
Chr2	stalkie_big_nohaplotig	CDS	94087428	94087898	.	+	0	Parent=FBgn0015575.2.mrna1;Target=FBgn0015575.2 1255 1725 +
Chr2	gffcl	locus	94088598	94089248	.	-	.	ID=RLOC_00019562;geneIDs=comp156787_c0_seq1.path1;transcripts=comp156787_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94088598	94089248	.	-	.	ID=comp156787_c0_seq1.mrna1;geneID=comp156787_c0_seq1.path1;Name=comp156787_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=646;mismatches=5;indels=0;unknowns=0;Target=comp156787_c0_seq1 651 1 .;CDS_Target=comp156787_c0_seq1 13 2 .;locus=RLOC_00019562
Chr2	stalkie_big_nohaplotig	exon	94088598	94089248	99	-	.	Parent=comp156787_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	94089236	94089247	.	-	0	Parent=comp156787_c0_seq1.mrna1
Chr2	gffcl	locus	94091193	94091474	.	+	.	ID=RLOC_00019563;geneIDs=comp729423_c0_seq1.path1;transcripts=comp729423_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94091193	94091474	.	+	.	ID=comp729423_c0_seq1.mrna1;geneID=comp729423_c0_seq1.path1;Name=comp729423_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=282;mismatches=0;indels=0;unknowns=0;Target=comp729423_c0_seq1 282 1 .;CDS_Target=comp729423_c0_seq1 276 160 .;locus=RLOC_00019563
Chr2	stalkie_big_nohaplotig	exon	94091193	94091474	100	+	.	Parent=comp729423_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	94091352	94091468	.	+	0	Parent=comp729423_c0_seq1.mrna1
Chr2	gffcl	locus	94099025	94099478	.	+	.	ID=RLOC_00019564;geneIDs=comp136801_c0_seq1.path1;transcripts=comp136801_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94099025	94099478	.	+	.	ID=comp136801_c0_seq1.mrna1;geneID=comp136801_c0_seq1.path1;Name=comp136801_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=454;mismatches=0;indels=0;unknowns=0;Target=comp136801_c0_seq1 455 2 .;CDS_Target=comp136801_c0_seq1 203 105 .;locus=RLOC_00019564
Chr2	stalkie_big_nohaplotig	exon	94099025	94099478	100	+	.	Parent=comp136801_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	94099128	94099226	.	+	0	Parent=comp136801_c0_seq1.mrna1
Chr2	gffcl	locus	94111956	94112450	.	+	.	ID=RLOC_00019565;geneIDs=comp112788_c0_seq1.path1;transcripts=comp112788_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94111956	94112450	.	+	.	ID=comp112788_c0_seq1.mrna1;geneID=comp112788_c0_seq1.path1;Name=comp112788_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=488;mismatches=1;indels=6;unknowns=0;Target=comp112788_c0_seq1 489 1 .;CDS_Target=comp112788_c0_seq1 84 1 .;locus=RLOC_00019565
Chr2	stalkie_big_nohaplotig	exon	94111956	94112450	98	+	.	Parent=comp112788_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	94111956	94112039	.	+	0	Parent=comp112788_c0_seq1.mrna1
Chr2	gffcl	locus	94112577	94140477	.	+	.	ID=RLOC_00019566;geneIDs=FBgn0015576.1.path1;transcripts=FBgn0015576.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94112577	94140477	.	+	.	ID=FBgn0015576.1.mrna1;geneID=FBgn0015576.1.path1;Name=FBgn0015576.1;Dir=sensecoverage=100.0;identity=99.6;matches=1865;mismatches=7;indels=0;unknowns=0;locus=RLOC_00019566
Chr2	stalkie_big_nohaplotig	exon	94112577	94112656	100	+	.	Parent=FBgn0015576.1.mrna1;Target=FBgn0015576.1 1 80 +
Chr2	stalkie_big_nohaplotig	exon	94137712	94138024	99	+	.	Parent=FBgn0015576.1.mrna1;Target=FBgn0015576.1 81 393 +
Chr2	stalkie_big_nohaplotig	exon	94138597	94138747	100	+	.	Parent=FBgn0015576.1.mrna1;Target=FBgn0015576.1 394 544 +
Chr2	stalkie_big_nohaplotig	exon	94139033	94139763	99	+	.	Parent=FBgn0015576.1.mrna1;Target=FBgn0015576.1 545 1275 +
Chr2	stalkie_big_nohaplotig	exon	94139881	94140477	99	+	.	Parent=FBgn0015576.1.mrna1;Target=FBgn0015576.1 1276 1872 +
Chr2	stalkie_big_nohaplotig	CDS	94112577	94112656	.	+	0	Parent=FBgn0015576.1.mrna1;Target=FBgn0015576.1 1 80 +
Chr2	stalkie_big_nohaplotig	CDS	94137712	94138024	.	+	1	Parent=FBgn0015576.1.mrna1;Target=FBgn0015576.1 81 393 +
Chr2	stalkie_big_nohaplotig	CDS	94138597	94138747	.	+	0	Parent=FBgn0015576.1.mrna1;Target=FBgn0015576.1 394 544 +
Chr2	stalkie_big_nohaplotig	CDS	94139033	94139763	.	+	2	Parent=FBgn0015576.1.mrna1;Target=FBgn0015576.1 545 1275 +
Chr2	stalkie_big_nohaplotig	CDS	94139881	94140477	.	+	0	Parent=FBgn0015576.1.mrna1;Target=FBgn0015576.1 1276 1872 +
Chr2	gffcl	locus	94131922	94134223	.	-	.	ID=RLOC_00019567;geneIDs=FBgn0032228.1.path1;transcripts=FBgn0032228.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94131922	94134223	.	-	.	ID=FBgn0032228.1.mrna1;geneID=FBgn0032228.1.path1;Name=FBgn0032228.1;Dir=sensecoverage=100.0;identity=98.8;matches=1011;mismatches=12;indels=0;unknowns=0;locus=RLOC_00019567
Chr2	stalkie_big_nohaplotig	exon	94131922	94132114	98	-	.	Parent=FBgn0032228.1.mrna1;Target=FBgn0032228.1 831 1023 +
Chr2	stalkie_big_nohaplotig	exon	94132179	94132339	98	-	.	Parent=FBgn0032228.1.mrna1;Target=FBgn0032228.1 670 830 +
Chr2	stalkie_big_nohaplotig	exon	94133035	94133421	98	-	.	Parent=FBgn0032228.1.mrna1;Target=FBgn0032228.1 283 669 +
Chr2	stalkie_big_nohaplotig	exon	94133498	94133650	98	-	.	Parent=FBgn0032228.1.mrna1;Target=FBgn0032228.1 130 282 +
Chr2	stalkie_big_nohaplotig	exon	94134095	94134223	100	-	.	Parent=FBgn0032228.1.mrna1;Target=FBgn0032228.1 1 129 +
Chr2	stalkie_big_nohaplotig	CDS	94131922	94132114	.	-	1	Parent=FBgn0032228.1.mrna1;Target=FBgn0032228.1 831 1023 +
Chr2	stalkie_big_nohaplotig	CDS	94132179	94132339	.	-	0	Parent=FBgn0032228.1.mrna1;Target=FBgn0032228.1 670 830 +
Chr2	stalkie_big_nohaplotig	CDS	94133035	94133421	.	-	0	Parent=FBgn0032228.1.mrna1;Target=FBgn0032228.1 283 669 +
Chr2	stalkie_big_nohaplotig	CDS	94133498	94133650	.	-	0	Parent=FBgn0032228.1.mrna1;Target=FBgn0032228.1 130 282 +
Chr2	stalkie_big_nohaplotig	CDS	94134095	94134223	.	-	0	Parent=FBgn0032228.1.mrna1;Target=FBgn0032228.1 1 129 +
Chr2	gffcl	locus	94157314	94157982	.	+	.	ID=RLOC_00019568;geneIDs=comp93820_c0_seq1.path1;transcripts=comp93820_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94157314	94157982	.	+	.	ID=comp93820_c0_seq1.mrna1;geneID=comp93820_c0_seq1.path1;Name=comp93820_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=669;mismatches=0;indels=0;unknowns=0;Target=comp93820_c0_seq1 669 1 .;CDS_Target=comp93820_c0_seq1 233 150 .;locus=RLOC_00019568
Chr2	stalkie_big_nohaplotig	exon	94157314	94157982	100	+	.	Parent=comp93820_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	94157463	94157546	.	+	0	Parent=comp93820_c0_seq1.mrna1
Chr2	gffcl	locus	94158245	94179514	.	+	.	ID=RLOC_00019569;geneIDs=FBgn0015577.1.path1;transcripts=FBgn0015577.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94158245	94179514	.	+	.	ID=FBgn0015577.1.mrna1;geneID=FBgn0015577.1.path1;Name=FBgn0015577.1;Dir=sensecoverage=100.0;identity=100.0;matches=1722;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019569
Chr2	stalkie_big_nohaplotig	exon	94158245	94158303	100	+	.	Parent=FBgn0015577.1.mrna1;Target=FBgn0015577.1 1 59 +
Chr2	stalkie_big_nohaplotig	exon	94177196	94177508	100	+	.	Parent=FBgn0015577.1.mrna1;Target=FBgn0015577.1 60 372 +
Chr2	stalkie_big_nohaplotig	exon	94177698	94177848	100	+	.	Parent=FBgn0015577.1.mrna1;Target=FBgn0015577.1 373 523 +
Chr2	stalkie_big_nohaplotig	exon	94177932	94178492	100	+	.	Parent=FBgn0015577.1.mrna1;Target=FBgn0015577.1 524 1084 +
Chr2	stalkie_big_nohaplotig	exon	94178813	94178988	100	+	.	Parent=FBgn0015577.1.mrna1;Target=FBgn0015577.1 1085 1260 +
Chr2	stalkie_big_nohaplotig	exon	94179053	94179514	100	+	.	Parent=FBgn0015577.1.mrna1;Target=FBgn0015577.1 1261 1722 +
Chr2	stalkie_big_nohaplotig	CDS	94158245	94158303	.	+	0	Parent=FBgn0015577.1.mrna1;Target=FBgn0015577.1 1 59 +
Chr2	stalkie_big_nohaplotig	CDS	94177196	94177508	.	+	1	Parent=FBgn0015577.1.mrna1;Target=FBgn0015577.1 60 372 +
Chr2	stalkie_big_nohaplotig	CDS	94177698	94177848	.	+	0	Parent=FBgn0015577.1.mrna1;Target=FBgn0015577.1 373 523 +
Chr2	stalkie_big_nohaplotig	CDS	94177932	94178492	.	+	2	Parent=FBgn0015577.1.mrna1;Target=FBgn0015577.1 524 1084 +
Chr2	stalkie_big_nohaplotig	CDS	94178813	94178988	.	+	2	Parent=FBgn0015577.1.mrna1;Target=FBgn0015577.1 1085 1260 +
Chr2	stalkie_big_nohaplotig	CDS	94179053	94179514	.	+	0	Parent=FBgn0015577.1.mrna1;Target=FBgn0015577.1 1261 1722 +
Chr2	gffcl	locus	94180186	94181427	.	+	.	ID=RLOC_00019570;geneIDs=comp116562_c0_seq1.path1,comp151330_c0_seq1.path1;transcripts=comp151330_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94180186	94181076	.	+	.	ID=comp151330_c0_seq1.mrna1;geneID=comp151330_c0_seq1.path1;Name=comp151330_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.4;matches=886;mismatches=5;indels=0;unknowns=0;Target=comp151330_c0_seq1 896 6 .;CDS_Target=comp151330_c0_seq1 492 397 .;locus=RLOC_00019570
Chr2	stalkie_big_nohaplotig	exon	94180186	94181076	99	+	.	Parent=comp151330_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	94180577	94180672	.	+	0	Parent=comp151330_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94220829	94221876	.	-	.	ID=comp151291_c0_seq1.mrna1;geneID=comp151291_c0_seq1.path1;Name=comp151291_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1040;mismatches=2;indels=7;unknowns=0;Target=comp151291_c0_seq1 1043 1 .;CDS_Target=comp151291_c0_seq1 110 3 .;locus=RLOC_00019571
Chr2	stalkie_big_nohaplotig	exon	94220829	94221876	99	-	.	Parent=comp151291_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	94221767	94221874	.	-	0	Parent=comp151291_c0_seq1.mrna1
Chr2	gffcl	locus	94208699	94209071	.	-	.	ID=RLOC_00019572;geneIDs=comp882266_c0_seq1.path1;transcripts=comp882266_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94208699	94209071	.	-	.	ID=comp882266_c0_seq1.mrna1;geneID=comp882266_c0_seq1.path1;Name=comp882266_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=373;mismatches=0;indels=0;unknowns=0;Target=comp882266_c0_seq1 373 1 .;CDS_Target=comp882266_c0_seq1 99 1 .;locus=RLOC_00019572
Chr2	stalkie_big_nohaplotig	exon	94208699	94209071	100	-	.	Parent=comp882266_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	94208973	94209071	.	-	0	Parent=comp882266_c0_seq1.mrna1
Chr2	gffcl	locus	94238265	94239481	.	-	.	ID=RLOC_00019573;geneIDs=ORF1640.path1;transcripts=ORF1640.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94238265	94239481	.	-	.	ID=ORF1640.mrna1;geneID=ORF1640.path1;Name=ORF1640;Dir=sensecoverage=100.0;identity=99.7;matches=1035;mismatches=3;indels=0;unknowns=0;locus=RLOC_00019573
Chr2	stalkie_big_nohaplotig	exon	94238265	94238428	98	-	.	Parent=ORF1640.mrna1;Target=ORF1640 875 1038 +
Chr2	stalkie_big_nohaplotig	exon	94238490	94238600	100	-	.	Parent=ORF1640.mrna1;Target=ORF1640 764 874 +
Chr2	stalkie_big_nohaplotig	exon	94238658	94239224	99	-	.	Parent=ORF1640.mrna1;Target=ORF1640 197 763 +
Chr2	stalkie_big_nohaplotig	exon	94239286	94239481	100	-	.	Parent=ORF1640.mrna1;Target=ORF1640 1 196 +
Chr2	stalkie_big_nohaplotig	CDS	94238265	94238428	.	-	2	Parent=ORF1640.mrna1;Target=ORF1640 875 1038 +
Chr2	stalkie_big_nohaplotig	CDS	94238490	94238600	.	-	2	Parent=ORF1640.mrna1;Target=ORF1640 764 874 +
Chr2	stalkie_big_nohaplotig	CDS	94238658	94239224	.	-	2	Parent=ORF1640.mrna1;Target=ORF1640 197 763 +
Chr2	stalkie_big_nohaplotig	CDS	94239286	94239481	.	-	0	Parent=ORF1640.mrna1;Target=ORF1640 1 196 +
Chr2	gffcl	locus	94318147	94318722	.	-	.	ID=RLOC_00019574;geneIDs=comp151628_c0_seq1.path1;transcripts=comp151628_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94318147	94318722	.	-	.	ID=comp151628_c0_seq1.mrna1;geneID=comp151628_c0_seq1.path1;Name=comp151628_c0_seq1;Dir=indeterminatecoverage=94.4;identity=99.1;matches=571;mismatches=5;indels=0;unknowns=0;Target=comp151628_c0_seq1 592 17 .;CDS_Target=comp151628_c0_seq1 303 199 .;locus=RLOC_00019574
Chr2	stalkie_big_nohaplotig	exon	94318147	94318722	99	-	.	Parent=comp151628_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	94318436	94318540	.	-	0	Parent=comp151628_c0_seq1.mrna1
Chr2	gffcl	locus	94334704	94334791	.	+	.	ID=RLOC_00019575;geneIDs=comp151001_c0_seq1.path1;transcripts=comp151001_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94334704	94334791	.	+	.	ID=comp151001_c0_seq1.mrna1;geneID=comp151001_c0_seq1.path1;Name=comp151001_c0_seq1;Dir=indeterminatecoverage=8.9;identity=100.0;matches=88;mismatches=0;indels=0;unknowns=0;Target=comp151001_c0_seq1 88 1 .;CDS_Target=comp151001_c0_seq1 88 71 .;locus=RLOC_00019575
Chr2	stalkie_big_nohaplotig	exon	94334704	94334791	100	+	.	Parent=comp151001_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	94334774	94334791	.	+	0	Parent=comp151001_c0_seq1.mrna1
Chr2	gffcl	locus	94400051	94412537	.	+	.	ID=RLOC_00019576;geneIDs=FBgn0032769.1.path1;transcripts=FBgn0032769.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94400051	94412537	.	+	.	ID=FBgn0032769.1.mrna1;geneID=FBgn0032769.1.path1;Name=FBgn0032769.1;Dir=sensecoverage=100.0;identity=99.8;matches=982;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019576
Chr2	stalkie_big_nohaplotig	exon	94400051	94400178	100	+	.	Parent=FBgn0032769.1.mrna1;Target=FBgn0032769.1 1 128 +
Chr2	stalkie_big_nohaplotig	exon	94403029	94403483	99	+	.	Parent=FBgn0032769.1.mrna1;Target=FBgn0032769.1 129 583 +
Chr2	stalkie_big_nohaplotig	exon	94406394	94406681	100	+	.	Parent=FBgn0032769.1.mrna1;Target=FBgn0032769.1 584 871 +
Chr2	stalkie_big_nohaplotig	exon	94412425	94412537	100	+	.	Parent=FBgn0032769.1.mrna1;Target=FBgn0032769.1 872 984 +
Chr2	stalkie_big_nohaplotig	CDS	94400051	94400178	.	+	0	Parent=FBgn0032769.1.mrna1;Target=FBgn0032769.1 1 128 +
Chr2	stalkie_big_nohaplotig	CDS	94403029	94403483	.	+	1	Parent=FBgn0032769.1.mrna1;Target=FBgn0032769.1 129 583 +
Chr2	stalkie_big_nohaplotig	CDS	94406394	94406681	.	+	2	Parent=FBgn0032769.1.mrna1;Target=FBgn0032769.1 584 871 +
Chr2	stalkie_big_nohaplotig	CDS	94412425	94412537	.	+	2	Parent=FBgn0032769.1.mrna1;Target=FBgn0032769.1 872 984 +
Chr2	gffcl	locus	94434527	94435837	.	+	.	ID=RLOC_00019577;geneIDs=ORF968.path1;transcripts=ORF968.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94434527	94435837	.	+	.	ID=ORF968.mrna1;geneID=ORF968.path1;Name=ORF968;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1302;mismatches=9;indels=0;unknowns=0;Target=ORF968 1311 1 .;locus=RLOC_00019577
Chr2	stalkie_big_nohaplotig	exon	94434527	94435837	99	+	.	Parent=ORF968.mrna1
Chr2	stalkie_big_nohaplotig	CDS	94434527	94435837	.	+	0	Parent=ORF968.mrna1
Chr2	gffcl	locus	94482708	94490143	.	+	.	ID=RLOC_00019578;geneIDs=comp154317_c0_seq1.path1;transcripts=comp154317_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94482708	94490143	.	+	.	ID=comp154317_c0_seq1.mrna1;geneID=comp154317_c0_seq1.path1;Name=comp154317_c0_seq1;Dir=sensecoverage=100.0;identity=99.1;matches=806;mismatches=7;indels=0;unknowns=0;locus=RLOC_00019578
Chr2	stalkie_big_nohaplotig	exon	94482708	94483018	98	+	.	Parent=comp154317_c0_seq1.mrna1;Target=comp154317_c0_seq1 1 311 +
Chr2	stalkie_big_nohaplotig	exon	94483529	94483707	99	+	.	Parent=comp154317_c0_seq1.mrna1;Target=comp154317_c0_seq1 312 490 +
Chr2	stalkie_big_nohaplotig	exon	94485288	94485564	99	+	.	Parent=comp154317_c0_seq1.mrna1;Target=comp154317_c0_seq1 491 767 +
Chr2	stalkie_big_nohaplotig	exon	94490098	94490143	100	+	.	Parent=comp154317_c0_seq1.mrna1;Target=comp154317_c0_seq1 768 813 +
Chr2	stalkie_big_nohaplotig	CDS	94482895	94483018	.	+	0	Parent=comp154317_c0_seq1.mrna1;Target=comp154317_c0_seq1 188 311 +
Chr2	stalkie_big_nohaplotig	CDS	94483529	94483707	.	+	2	Parent=comp154317_c0_seq1.mrna1;Target=comp154317_c0_seq1 312 490 +
Chr2	stalkie_big_nohaplotig	CDS	94485288	94485560	.	+	0	Parent=comp154317_c0_seq1.mrna1;Target=comp154317_c0_seq1 491 763 +
Chr2	gffcl	locus	94543196	94543374	.	+	.	ID=RLOC_00019579;geneIDs=comp149539_c0_seq1.path1;transcripts=comp149539_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94543196	94543374	.	+	.	ID=comp149539_c0_seq1.mrna1;geneID=comp149539_c0_seq1.path1;Name=comp149539_c0_seq1;Dir=indeterminatecoverage=16.0;identity=98.9;matches=177;mismatches=2;indels=0;unknowns=0;Target=comp149539_c0_seq1 179 1 .;locus=RLOC_00019579
Chr2	stalkie_big_nohaplotig	exon	94543196	94543374	98	+	.	Parent=comp149539_c0_seq1.mrna1
Chr2	gffcl	locus	94624303	94625357	.	-	.	ID=RLOC_00019580;geneIDs=comp156807_c0_seq1.path1;transcripts=comp156807_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94624303	94625357	.	-	.	ID=comp156807_c0_seq1.mrna1;geneID=comp156807_c0_seq1.path1;Name=comp156807_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=1038;mismatches=17;indels=1;unknowns=0;Target=comp156807_c0_seq1 1056 1 .;CDS_Target=comp156807_c0_seq1 371 294 .;locus=RLOC_00019580
Chr2	stalkie_big_nohaplotig	exon	94624303	94625357	98	-	.	Parent=comp156807_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	94624988	94625064	.	-	0	Parent=comp156807_c0_seq1.mrna1
Chr2	gffcl	locus	94630496	94631398	.	-	.	ID=RLOC_00019581;geneIDs=comp151001_c0_seq1.path2;transcripts=comp151001_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	94630496	94631398	.	-	.	ID=comp151001_c0_seq1.mrna2;geneID=comp151001_c0_seq1.path2;Name=comp151001_c0_seq1;Dir=indeterminatecoverage=91.1;identity=99.6;matches=899;mismatches=4;indels=0;unknowns=0;Target=comp151001_c0_seq1 991 89 .;CDS_Target=comp151001_c0_seq1 799 89 .;locus=RLOC_00019581
Chr2	stalkie_big_nohaplotig	exon	94630496	94631398	99	-	.	Parent=comp151001_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	94630688	94631398	.	-	0	Parent=comp151001_c0_seq1.mrna2
Chr2	gffcl	locus	94648363	94650140	.	-	.	ID=RLOC_00019582;geneIDs=FBgn0011774.1.path1;transcripts=FBgn0011774.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94648363	94650140	.	-	.	ID=FBgn0011774.1.mrna1;geneID=FBgn0011774.1.path1;Name=FBgn0011774.1;Dir=sensecoverage=99.3;identity=99.5;matches=1711;mismatches=8;indels=0;unknowns=0;locus=RLOC_00019582
Chr2	stalkie_big_nohaplotig	exon	94648363	94649393	99	-	.	Parent=FBgn0011774.1.mrna1;Target=FBgn0011774.1 689 1719 +
Chr2	stalkie_big_nohaplotig	exon	94649453	94650140	99	-	.	Parent=FBgn0011774.1.mrna1;Target=FBgn0011774.1 1 688 +
Chr2	stalkie_big_nohaplotig	CDS	94648363	94649393	.	-	2	Parent=FBgn0011774.1.mrna1;Target=FBgn0011774.1 689 1719 +
Chr2	stalkie_big_nohaplotig	CDS	94649453	94650140	.	-	0	Parent=FBgn0011774.1.mrna1;Target=FBgn0011774.1 1 688 +
Chr2	gffcl	locus	94651310	94651510	.	+	.	ID=RLOC_00019583;geneIDs=FBgn0033519.1.path1;transcripts=FBgn0033519.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94651310	94651510	.	+	.	ID=FBgn0033519.1.mrna1;geneID=FBgn0033519.1.path1;Name=FBgn0033519.1;Dir=sensecoverage=39.5;identity=99.3;matches=133;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019583
Chr2	stalkie_big_nohaplotig	exon	94651310	94651343	100	+	.	Parent=FBgn0033519.1.mrna1;Target=FBgn0033519.1 1 34 +
Chr2	stalkie_big_nohaplotig	exon	94651411	94651510	99	+	.	Parent=FBgn0033519.1.mrna1;Target=FBgn0033519.1 35 134 +
Chr2	stalkie_big_nohaplotig	CDS	94651310	94651343	.	+	0	Parent=FBgn0033519.1.mrna1;Target=FBgn0033519.1 1 34 +
Chr2	stalkie_big_nohaplotig	CDS	94651411	94651508	.	+	2	Parent=FBgn0033519.1.mrna1;Target=FBgn0033519.1 35 132 +
Chr2	gffcl	locus	94653910	94654949	.	+	.	ID=RLOC_00019584;geneIDs=comp150456_c0_seq1.path1;transcripts=comp150456_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94653910	94654949	.	+	.	ID=comp150456_c0_seq1.mrna1;geneID=comp150456_c0_seq1.path1;Name=comp150456_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1034;mismatches=6;indels=2;unknowns=0;Target=comp150456_c0_seq1 1042 1 .;CDS_Target=comp150456_c0_seq1 529 398 .;locus=RLOC_00019584
Chr2	stalkie_big_nohaplotig	exon	94653910	94654949	99	+	.	Parent=comp150456_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	94654306	94654437	.	+	0	Parent=comp150456_c0_seq1.mrna1
Chr2	gffcl	locus	94655342	94655842	.	-	.	ID=RLOC_00019585;geneIDs=comp157710_c1_seq1.path1;transcripts=comp157710_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94655342	94655842	.	-	.	ID=comp157710_c1_seq1.mrna1;geneID=comp157710_c1_seq1.path1;Name=comp157710_c1_seq1;Dir=indeterminatecoverage=35.2;identity=99.6;matches=499;mismatches=2;indels=0;unknowns=0;Target=comp157710_c1_seq1 1425 925 .;CDS_Target=comp157710_c1_seq1 1070 927 .;locus=RLOC_00019585
Chr2	stalkie_big_nohaplotig	exon	94655342	94655842	99	-	.	Parent=comp157710_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	94655697	94655840	.	-	0	Parent=comp157710_c1_seq1.mrna1
Chr2	gffcl	locus	94669211	94678593	.	+	.	ID=RLOC_00019586;geneIDs=FBgn0038862.1.path1;transcripts=FBgn0038862.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94669211	94678593	.	+	.	ID=FBgn0038862.1.mrna1;geneID=FBgn0038862.1.path1;Name=FBgn0038862.1;Dir=sensecoverage=100.0;identity=99.6;matches=2514;mismatches=8;indels=1;unknowns=0;locus=RLOC_00019586
Chr2	stalkie_big_nohaplotig	exon	94669211	94669326	99	+	.	Parent=FBgn0038862.1.mrna1;Target=FBgn0038862.1 1 116 +
Chr2	stalkie_big_nohaplotig	exon	94669405	94669926	99	+	.	Parent=FBgn0038862.1.mrna1;Target=FBgn0038862.1 117 638 +
Chr2	stalkie_big_nohaplotig	exon	94669997	94670159	99	+	.	Parent=FBgn0038862.1.mrna1;Target=FBgn0038862.1 639 801 +
Chr2	stalkie_big_nohaplotig	exon	94671835	94672338	100	+	.	Parent=FBgn0038862.1.mrna1;Target=FBgn0038862.1 802 1305 +
Chr2	stalkie_big_nohaplotig	exon	94672499	94672867	100	+	.	Parent=FBgn0038862.1.mrna1;Target=FBgn0038862.1 1306 1674 +
Chr2	stalkie_big_nohaplotig	exon	94676824	94677054	99	+	.	Parent=FBgn0038862.1.mrna1;Target=FBgn0038862.1 1675 1905 +
Chr2	stalkie_big_nohaplotig	exon	94677135	94677598	100	+	.	Parent=FBgn0038862.1.mrna1;Target=FBgn0038862.1 1906 2369 +
Chr2	stalkie_big_nohaplotig	exon	94678441	94678593	98	+	.	Parent=FBgn0038862.1.mrna1;Target=FBgn0038862.1 2370 2523 +
Chr2	stalkie_big_nohaplotig	CDS	94669211	94669326	.	+	0	Parent=FBgn0038862.1.mrna1;Target=FBgn0038862.1 1 116 +
Chr2	stalkie_big_nohaplotig	CDS	94669405	94669926	.	+	1	Parent=FBgn0038862.1.mrna1;Target=FBgn0038862.1 117 638 +
Chr2	stalkie_big_nohaplotig	CDS	94669997	94670159	.	+	1	Parent=FBgn0038862.1.mrna1;Target=FBgn0038862.1 639 801 +
Chr2	stalkie_big_nohaplotig	CDS	94671835	94672338	.	+	0	Parent=FBgn0038862.1.mrna1;Target=FBgn0038862.1 802 1305 +
Chr2	stalkie_big_nohaplotig	CDS	94672499	94672867	.	+	0	Parent=FBgn0038862.1.mrna1;Target=FBgn0038862.1 1306 1674 +
Chr2	stalkie_big_nohaplotig	CDS	94676824	94677054	.	+	0	Parent=FBgn0038862.1.mrna1;Target=FBgn0038862.1 1675 1905 +
Chr2	stalkie_big_nohaplotig	CDS	94677135	94677598	.	+	0	Parent=FBgn0038862.1.mrna1;Target=FBgn0038862.1 1906 2369 +
Chr2	stalkie_big_nohaplotig	CDS	94678441	94678593	.	+	1	Parent=FBgn0038862.1.mrna1;Target=FBgn0038862.1 2370 2523 +
Chr2	gffcl	locus	94679262	94679561	.	-	.	ID=RLOC_00019587;geneIDs=comp67013_c0_seq1.path1;transcripts=comp67013_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94679262	94679561	.	-	.	ID=comp67013_c0_seq1.mrna1;geneID=comp67013_c0_seq1.path1;Name=comp67013_c0_seq1;Dir=indeterminatecoverage=96.2;identity=100.0;matches=300;mismatches=0;indels=0;unknowns=0;Target=comp67013_c0_seq1 300 1 .;CDS_Target=comp67013_c0_seq1 33 1 .;locus=RLOC_00019587
Chr2	stalkie_big_nohaplotig	exon	94679262	94679561	100	-	.	Parent=comp67013_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	94679529	94679561	.	-	0	Parent=comp67013_c0_seq1.mrna1
Chr2	gffcl	locus	94681699	94704919	.	-	.	ID=RLOC_00019588;geneIDs=FBgn0038427.1.path2,comp160965_c0_seq1.path1;transcripts=FBgn0038427.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	94681929	94704919	.	-	.	ID=FBgn0038427.1.mrna2;geneID=FBgn0038427.1.path2;Name=FBgn0038427.1;Dir=indeterminatecoverage=86.0;identity=98.8;matches=2783;mismatches=29;indels=4;unknowns=0;locus=RLOC_00019588
Chr2	stalkie_big_nohaplotig	exon	94681929	94682226	99	-	.	Parent=FBgn0038427.1.mrna2;Target=FBgn0038427.1 3276 2979 .
Chr2	stalkie_big_nohaplotig	exon	94682294	94682488	97	-	.	Parent=FBgn0038427.1.mrna2;Target=FBgn0038427.1 2978 2784 .
Chr2	stalkie_big_nohaplotig	exon	94686853	94687118	99	-	.	Parent=FBgn0038427.1.mrna2;Target=FBgn0038427.1 2783 2518 .
Chr2	stalkie_big_nohaplotig	exon	94687176	94687483	98	-	.	Parent=FBgn0038427.1.mrna2;Target=FBgn0038427.1 2517 2210 .
Chr2	stalkie_big_nohaplotig	exon	94687547	94688005	99	-	.	Parent=FBgn0038427.1.mrna2;Target=FBgn0038427.1 2209 1751 .
Chr2	stalkie_big_nohaplotig	exon	94688062	94688178	100	-	.	Parent=FBgn0038427.1.mrna2;Target=FBgn0038427.1 1750 1634 .
Chr2	stalkie_big_nohaplotig	exon	94688824	94689725	99	-	.	Parent=FBgn0038427.1.mrna2;Target=FBgn0038427.1 1633 732 .
Chr2	stalkie_big_nohaplotig	exon	94689788	94689874	97	-	.	Parent=FBgn0038427.1.mrna2;Target=FBgn0038427.1 731 645 .
Chr2	stalkie_big_nohaplotig	exon	94689933	94690075	100	-	.	Parent=FBgn0038427.1.mrna2;Target=FBgn0038427.1 644 502 .
Chr2	stalkie_big_nohaplotig	exon	94692006	94692014	100	-	.	Parent=FBgn0038427.1.mrna2;Target=FBgn0038427.1 501 493 .
Chr2	stalkie_big_nohaplotig	exon	94704892	94704919	53	-	.	Parent=FBgn0038427.1.mrna2;Target=FBgn0038427.1 492 461 .
Chr2	stalkie_big_nohaplotig	CDS	94681929	94682226	.	-	1	Parent=FBgn0038427.1.mrna2;Target=FBgn0038427.1 3276 2979 .
Chr2	stalkie_big_nohaplotig	CDS	94682294	94682488	.	-	1	Parent=FBgn0038427.1.mrna2;Target=FBgn0038427.1 2978 2784 .
Chr2	stalkie_big_nohaplotig	CDS	94686853	94687118	.	-	0	Parent=FBgn0038427.1.mrna2;Target=FBgn0038427.1 2783 2518 .
Chr2	stalkie_big_nohaplotig	CDS	94687176	94687483	.	-	2	Parent=FBgn0038427.1.mrna2;Target=FBgn0038427.1 2517 2210 .
Chr2	stalkie_big_nohaplotig	CDS	94687547	94688005	.	-	2	Parent=FBgn0038427.1.mrna2;Target=FBgn0038427.1 2209 1751 .
Chr2	stalkie_big_nohaplotig	CDS	94688062	94688178	.	-	2	Parent=FBgn0038427.1.mrna2;Target=FBgn0038427.1 1750 1634 .
Chr2	stalkie_big_nohaplotig	CDS	94688824	94689725	.	-	1	Parent=FBgn0038427.1.mrna2;Target=FBgn0038427.1 1633 732 .
Chr2	stalkie_big_nohaplotig	CDS	94689788	94689874	.	-	1	Parent=FBgn0038427.1.mrna2;Target=FBgn0038427.1 731 645 .
Chr2	stalkie_big_nohaplotig	CDS	94689933	94690015	.	-	0	Parent=FBgn0038427.1.mrna2;Target=FBgn0038427.1 644 562 .
Chr2	gffcl	locus	94685266	94685564	.	+	.	ID=RLOC_00019589;geneIDs=comp149659_c0_seq1.path1;transcripts=comp149659_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94685266	94685564	.	+	.	ID=comp149659_c0_seq1.mrna1;geneID=comp149659_c0_seq1.path1;Name=comp149659_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=299;mismatches=0;indels=0;unknowns=0;Target=comp149659_c0_seq1 299 1 .;CDS_Target=comp149659_c0_seq1 95 3 .;locus=RLOC_00019589
Chr2	stalkie_big_nohaplotig	exon	94685266	94685564	100	+	.	Parent=comp149659_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	94685268	94685360	.	+	0	Parent=comp149659_c0_seq1.mrna1
Chr2	gffcl	locus	94701785	94710295	.	+	.	ID=RLOC_00019590;geneIDs=FBgn0051755.1.path1;transcripts=FBgn0051755.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94701785	94710295	.	+	.	ID=FBgn0051755.1.mrna1;geneID=FBgn0051755.1.path1;Name=FBgn0051755.1;Dir=sensecoverage=100.0;identity=99.4;matches=4303;mismatches=26;indels=0;unknowns=0;locus=RLOC_00019590
Chr2	stalkie_big_nohaplotig	exon	94701785	94701831	100	+	.	Parent=FBgn0051755.1.mrna1;Target=FBgn0051755.1 1 47 +
Chr2	stalkie_big_nohaplotig	exon	94701899	94702055	98	+	.	Parent=FBgn0051755.1.mrna1;Target=FBgn0051755.1 48 204 +
Chr2	stalkie_big_nohaplotig	exon	94703171	94703257	98	+	.	Parent=FBgn0051755.1.mrna1;Target=FBgn0051755.1 205 291 +
Chr2	stalkie_big_nohaplotig	exon	94703322	94703396	100	+	.	Parent=FBgn0051755.1.mrna1;Target=FBgn0051755.1 292 366 +
Chr2	stalkie_big_nohaplotig	exon	94703450	94704012	99	+	.	Parent=FBgn0051755.1.mrna1;Target=FBgn0051755.1 367 929 +
Chr2	stalkie_big_nohaplotig	exon	94704972	94706022	99	+	.	Parent=FBgn0051755.1.mrna1;Target=FBgn0051755.1 930 1980 +
Chr2	stalkie_big_nohaplotig	exon	94706084	94706575	100	+	.	Parent=FBgn0051755.1.mrna1;Target=FBgn0051755.1 1981 2472 +
Chr2	stalkie_big_nohaplotig	exon	94706628	94707620	99	+	.	Parent=FBgn0051755.1.mrna1;Target=FBgn0051755.1 2473 3465 +
Chr2	stalkie_big_nohaplotig	exon	94709432	94710295	98	+	.	Parent=FBgn0051755.1.mrna1;Target=FBgn0051755.1 3466 4329 +
Chr2	stalkie_big_nohaplotig	CDS	94701785	94701831	.	+	0	Parent=FBgn0051755.1.mrna1;Target=FBgn0051755.1 1 47 +
Chr2	stalkie_big_nohaplotig	CDS	94701899	94702055	.	+	1	Parent=FBgn0051755.1.mrna1;Target=FBgn0051755.1 48 204 +
Chr2	stalkie_big_nohaplotig	CDS	94703171	94703257	.	+	0	Parent=FBgn0051755.1.mrna1;Target=FBgn0051755.1 205 291 +
Chr2	stalkie_big_nohaplotig	CDS	94703322	94703396	.	+	0	Parent=FBgn0051755.1.mrna1;Target=FBgn0051755.1 292 366 +
Chr2	stalkie_big_nohaplotig	CDS	94703450	94704012	.	+	0	Parent=FBgn0051755.1.mrna1;Target=FBgn0051755.1 367 929 +
Chr2	stalkie_big_nohaplotig	CDS	94704972	94706022	.	+	1	Parent=FBgn0051755.1.mrna1;Target=FBgn0051755.1 930 1980 +
Chr2	stalkie_big_nohaplotig	CDS	94706084	94706575	.	+	0	Parent=FBgn0051755.1.mrna1;Target=FBgn0051755.1 1981 2472 +
Chr2	stalkie_big_nohaplotig	CDS	94706628	94707620	.	+	0	Parent=FBgn0051755.1.mrna1;Target=FBgn0051755.1 2473 3465 +
Chr2	stalkie_big_nohaplotig	CDS	94709432	94710295	.	+	0	Parent=FBgn0051755.1.mrna1;Target=FBgn0051755.1 3466 4329 +
Chr2	gffcl	locus	94712052	94712617	.	-	.	ID=RLOC_00019591;geneIDs=comp150800_c0_seq1.path1;transcripts=comp150800_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94712052	94712617	.	-	.	ID=comp150800_c0_seq1.mrna1;geneID=comp150800_c0_seq1.path1;Name=comp150800_c0_seq1;Dir=indeterminatecoverage=76.8;identity=99.1;matches=561;mismatches=5;indels=0;unknowns=0;Target=comp150800_c0_seq1 737 172 .;CDS_Target=comp150800_c0_seq1 737 657 .;locus=RLOC_00019591
Chr2	stalkie_big_nohaplotig	exon	94712052	94712617	99	-	.	Parent=comp150800_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	94712052	94712132	.	-	0	Parent=comp150800_c0_seq1.mrna1
Chr2	gffcl	locus	94755794	94759528	.	+	.	ID=RLOC_00019592;geneIDs=ORF889.path1;transcripts=ORF889.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94755794	94759528	.	+	.	ID=ORF889.mrna1;geneID=ORF889.path1;Name=ORF889;Dir=sensecoverage=99.9;identity=99.6;matches=1356;mismatches=5;indels=0;unknowns=0;locus=RLOC_00019592
Chr2	stalkie_big_nohaplotig	exon	94755794	94755991	100	+	.	Parent=ORF889.mrna1;Target=ORF889 2 199 +
Chr2	stalkie_big_nohaplotig	exon	94758366	94759528	99	+	.	Parent=ORF889.mrna1;Target=ORF889 200 1362 +
Chr2	stalkie_big_nohaplotig	CDS	94755796	94755991	.	+	0	Parent=ORF889.mrna1;Target=ORF889 4 199 +
Chr2	stalkie_big_nohaplotig	CDS	94758366	94759528	.	+	2	Parent=ORF889.mrna1;Target=ORF889 200 1362 +
Chr2	gffcl	locus	94952933	94958169	.	-	.	ID=RLOC_00019593;geneIDs=FBgn0032132.1.path1;transcripts=FBgn0032132.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	94952933	94958169	.	-	.	ID=FBgn0032132.1.mrna1;geneID=FBgn0032132.1.path1;Name=FBgn0032132.1;Dir=sensecoverage=100.0;identity=100.0;matches=1674;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019593
Chr2	stalkie_big_nohaplotig	exon	94952933	94953059	100	-	.	Parent=FBgn0032132.1.mrna1;Target=FBgn0032132.1 1548 1674 +
Chr2	stalkie_big_nohaplotig	exon	94954871	94955000	100	-	.	Parent=FBgn0032132.1.mrna1;Target=FBgn0032132.1 1418 1547 +
Chr2	stalkie_big_nohaplotig	exon	94955707	94956727	100	-	.	Parent=FBgn0032132.1.mrna1;Target=FBgn0032132.1 397 1417 +
Chr2	stalkie_big_nohaplotig	exon	94957629	94957754	100	-	.	Parent=FBgn0032132.1.mrna1;Target=FBgn0032132.1 271 396 +
Chr2	stalkie_big_nohaplotig	exon	94957900	94958169	100	-	.	Parent=FBgn0032132.1.mrna1;Target=FBgn0032132.1 1 270 +
Chr2	stalkie_big_nohaplotig	CDS	94952933	94953059	.	-	1	Parent=FBgn0032132.1.mrna1;Target=FBgn0032132.1 1548 1674 +
Chr2	stalkie_big_nohaplotig	CDS	94954871	94955000	.	-	2	Parent=FBgn0032132.1.mrna1;Target=FBgn0032132.1 1418 1547 +
Chr2	stalkie_big_nohaplotig	CDS	94955707	94956727	.	-	0	Parent=FBgn0032132.1.mrna1;Target=FBgn0032132.1 397 1417 +
Chr2	stalkie_big_nohaplotig	CDS	94957629	94957754	.	-	0	Parent=FBgn0032132.1.mrna1;Target=FBgn0032132.1 271 396 +
Chr2	stalkie_big_nohaplotig	CDS	94957900	94958169	.	-	0	Parent=FBgn0032132.1.mrna1;Target=FBgn0032132.1 1 270 +
Chr2	gffcl	locus	95002222	95003018	.	+	.	ID=RLOC_00019594;geneIDs=comp148882_c0_seq1.path1;transcripts=comp148882_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95002222	95003018	.	+	.	ID=comp148882_c0_seq1.mrna1;geneID=comp148882_c0_seq1.path1;Name=comp148882_c0_seq1;Dir=indeterminatecoverage=95.2;identity=100.0;matches=797;mismatches=0;indels=0;unknowns=0;Target=comp148882_c0_seq1 817 21 .;CDS_Target=comp148882_c0_seq1 494 315 .;locus=RLOC_00019594
Chr2	stalkie_big_nohaplotig	exon	95002222	95003018	100	+	.	Parent=comp148882_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95002516	95002695	.	+	0	Parent=comp148882_c0_seq1.mrna1
Chr2	gffcl	locus	95079420	95141044	.	-	.	ID=RLOC_00019595;geneIDs=comp150359_c0_seq1.path1;transcripts=comp150359_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95079420	95141044	.	-	.	ID=comp150359_c0_seq1.mrna1;geneID=comp150359_c0_seq1.path1;Name=comp150359_c0_seq1;Dir=antisensecoverage=98.1;identity=99.7;matches=1012;mismatches=3;indels=0;unknowns=0;locus=RLOC_00019595
Chr2	stalkie_big_nohaplotig	exon	95079420	95079803	100	-	.	Parent=comp150359_c0_seq1.mrna1;Target=comp150359_c0_seq1 2 385 -
Chr2	stalkie_big_nohaplotig	exon	95079891	95079951	100	-	.	Parent=comp150359_c0_seq1.mrna1;Target=comp150359_c0_seq1 386 446 -
Chr2	stalkie_big_nohaplotig	exon	95080055	95080143	98	-	.	Parent=comp150359_c0_seq1.mrna1;Target=comp150359_c0_seq1 447 535 -
Chr2	stalkie_big_nohaplotig	exon	95135479	95135546	100	-	.	Parent=comp150359_c0_seq1.mrna1;Target=comp150359_c0_seq1 536 603 -
Chr2	stalkie_big_nohaplotig	exon	95135604	95135643	100	-	.	Parent=comp150359_c0_seq1.mrna1;Target=comp150359_c0_seq1 604 643 -
Chr2	stalkie_big_nohaplotig	exon	95135716	95135808	100	-	.	Parent=comp150359_c0_seq1.mrna1;Target=comp150359_c0_seq1 644 736 -
Chr2	stalkie_big_nohaplotig	exon	95138316	95138418	99	-	.	Parent=comp150359_c0_seq1.mrna1;Target=comp150359_c0_seq1 737 839 -
Chr2	stalkie_big_nohaplotig	exon	95140868	95141044	99	-	.	Parent=comp150359_c0_seq1.mrna1;Target=comp150359_c0_seq1 840 1016 -
Chr2	stalkie_big_nohaplotig	CDS	95079657	95079803	.	-	0	Parent=comp150359_c0_seq1.mrna1;Target=comp150359_c0_seq1 239 385 .
Chr2	stalkie_big_nohaplotig	CDS	95079891	95079951	.	-	1	Parent=comp150359_c0_seq1.mrna1;Target=comp150359_c0_seq1 386 446 .
Chr2	stalkie_big_nohaplotig	CDS	95080055	95080143	.	-	0	Parent=comp150359_c0_seq1.mrna1;Target=comp150359_c0_seq1 447 535 .
Chr2	stalkie_big_nohaplotig	CDS	95135479	95135546	.	-	2	Parent=comp150359_c0_seq1.mrna1;Target=comp150359_c0_seq1 536 603 .
Chr2	stalkie_big_nohaplotig	CDS	95135604	95135643	.	-	0	Parent=comp150359_c0_seq1.mrna1;Target=comp150359_c0_seq1 604 643 .
Chr2	stalkie_big_nohaplotig	CDS	95135716	95135808	.	-	0	Parent=comp150359_c0_seq1.mrna1;Target=comp150359_c0_seq1 644 736 .
Chr2	stalkie_big_nohaplotig	CDS	95138316	95138393	.	-	0	Parent=comp150359_c0_seq1.mrna1;Target=comp150359_c0_seq1 737 814 .
Chr2	gffcl	locus	95083264	95103332	.	+	.	ID=RLOC_00019596;geneIDs=FBgn0011666.1.path1,comp153492_c0_seq1.path1;transcripts=FBgn0011666.1.mrna1,comp153492_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95083264	95103332	.	+	.	ID=FBgn0011666.1.mrna1;geneID=FBgn0011666.1.path1;Name=FBgn0011666.1;Dir=sensecoverage=100.0;identity=99.6;matches=1835;mismatches=7;indels=0;unknowns=0;locus=RLOC_00019596
Chr2	stalkie_big_nohaplotig	exon	95083264	95083989	99	+	.	Parent=FBgn0011666.1.mrna1;Target=FBgn0011666.1 1 726 +
Chr2	stalkie_big_nohaplotig	exon	95100461	95101179	99	+	.	Parent=FBgn0011666.1.mrna1;Target=FBgn0011666.1 727 1445 +
Chr2	stalkie_big_nohaplotig	exon	95102936	95103332	99	+	.	Parent=FBgn0011666.1.mrna1;Target=FBgn0011666.1 1446 1842 +
Chr2	stalkie_big_nohaplotig	CDS	95083264	95083989	.	+	0	Parent=FBgn0011666.1.mrna1;Target=FBgn0011666.1 1 726 +
Chr2	stalkie_big_nohaplotig	CDS	95100461	95101179	.	+	0	Parent=FBgn0011666.1.mrna1;Target=FBgn0011666.1 727 1445 +
Chr2	stalkie_big_nohaplotig	CDS	95102936	95103332	.	+	1	Parent=FBgn0011666.1.mrna1;Target=FBgn0011666.1 1446 1842 +
Chr2	stalkie_big_nohaplotig	mRNA	95083966	95092466	.	+	.	ID=comp153492_c0_seq1.mrna1;geneID=comp153492_c0_seq1.path1;Name=comp153492_c0_seq1;Dir=sensecoverage=99.9;identity=99.9;matches=671;mismatches=1;indels=0;unknowns=0;Target=comp153492_c0_seq1 77 256 +;locus=RLOC_00019596
Chr2	stalkie_big_nohaplotig	exon	95083966	95083989	100	+	.	Parent=comp153492_c0_seq1.mrna1;Target=comp153492_c0_seq1 1 24 +
Chr2	stalkie_big_nohaplotig	exon	95091819	95092466	99	+	.	Parent=comp153492_c0_seq1.mrna1;Target=comp153492_c0_seq1 25 672 +
Chr2	stalkie_big_nohaplotig	CDS	95091871	95092050	.	+	0	Parent=comp153492_c0_seq1.mrna1
Chr2	gffcl	locus	95107822	95108272	.	-	.	ID=RLOC_00019597;geneIDs=comp156328_c0_seq1.path1;transcripts=comp156328_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95107822	95108272	.	-	.	ID=comp156328_c0_seq1.mrna1;geneID=comp156328_c0_seq1.path1;Name=comp156328_c0_seq1;Dir=indeterminatecoverage=92.8;identity=93.3;matches=433;mismatches=17;indels=14;unknowns=0;Target=comp156328_c0_seq1 494 32 .;CDS_Target=comp156328_c0_seq1 62 33 .;locus=RLOC_00019597
Chr2	stalkie_big_nohaplotig	exon	95107822	95108272	93	-	.	Parent=comp156328_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95108242	95108271	.	-	0	Parent=comp156328_c0_seq1.mrna1
Chr2	gffcl	locus	95108279	95108945	.	-	.	ID=RLOC_00019598;geneIDs=comp149121_c0_seq1.path1;transcripts=comp149121_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95108279	95108945	.	-	.	ID=comp149121_c0_seq1.mrna1;geneID=comp149121_c0_seq1.path1;Name=comp149121_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.6;matches=666;mismatches=1;indels=2;unknowns=0;Target=comp149121_c0_seq1 671 3 .;CDS_Target=comp149121_c0_seq1 580 494 .;locus=RLOC_00019598
Chr2	stalkie_big_nohaplotig	exon	95108279	95108945	99	-	.	Parent=comp149121_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95108370	95108456	.	-	0	Parent=comp149121_c0_seq1.mrna1
Chr2	gffcl	locus	95108994	95109225	.	+	.	ID=RLOC_00019599;geneIDs=comp830519_c0_seq1.path1;transcripts=comp830519_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95108994	95109225	.	+	.	ID=comp830519_c0_seq1.mrna1;geneID=comp830519_c0_seq1.path1;Name=comp830519_c0_seq1;Dir=indeterminatecoverage=94.7;identity=99.1;matches=231;mismatches=1;indels=1;unknowns=0;Target=comp830519_c0_seq1 246 14 .;CDS_Target=comp830519_c0_seq1 238 185 .;locus=RLOC_00019599
Chr2	stalkie_big_nohaplotig	exon	95108994	95109225	99	+	.	Parent=comp830519_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95109164	95109217	.	+	0	Parent=comp830519_c0_seq1.mrna1
Chr2	gffcl	locus	95109332	95109801	.	+	.	ID=RLOC_00019600;geneIDs=comp150184_c0_seq1.path1;transcripts=comp150184_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95109332	95109801	.	+	.	ID=comp150184_c0_seq1.mrna1;geneID=comp150184_c0_seq1.path1;Name=comp150184_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.4;matches=467;mismatches=3;indels=0;unknowns=0;Target=comp150184_c0_seq1 472 3 .;CDS_Target=comp150184_c0_seq1 120 4 .;locus=RLOC_00019600
Chr2	stalkie_big_nohaplotig	exon	95109332	95109801	99	+	.	Parent=comp150184_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95109333	95109449	.	+	0	Parent=comp150184_c0_seq1.mrna1
Chr2	gffcl	locus	95109804	95113403	.	.	.	ID=RLOC_00019601;geneIDs=comp157040_c0_seq1.path1,comp159922_c0_seq1.path1;transcripts=comp157040_c0_seq1.mrna1,comp159922_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95109804	95113403	.	+	.	ID=comp157040_c0_seq1.mrna1;geneID=comp157040_c0_seq1.path1;Name=comp157040_c0_seq1;Dir=indeterminatecoverage=89.9;identity=91.7;matches=586;mismatches=27;indels=26;unknowns=100;locus=RLOC_00019601
Chr2	stalkie_big_nohaplotig	exon	95109804	95110185	95	+	.	Parent=comp157040_c0_seq1.mrna1;Target=comp157040_c0_seq1 395 20 .
Chr2	stalkie_big_nohaplotig	exon	95111692	95111729	61	+	.	Parent=comp157040_c0_seq1.mrna1;Target=comp157040_c0_seq1 628 600 .
Chr2	stalkie_big_nohaplotig	exon	95112108	95112126	56	+	.	Parent=comp157040_c0_seq1.mrna1;Target=comp157040_c0_seq1 653 629 .
Chr2	stalkie_big_nohaplotig	exon	95112851	95112854	100	+	.	Parent=comp157040_c0_seq1.mrna1;Target=comp157040_c0_seq1 657 654 .
Chr2	stalkie_big_nohaplotig	exon	95112973	95112978	100	+	.	Parent=comp157040_c0_seq1.mrna1;Target=comp157040_c0_seq1 663 658 .
Chr2	stalkie_big_nohaplotig	exon	95113123	95113403	95	+	.	Parent=comp157040_c0_seq1.mrna1;Target=comp157040_c0_seq1 945 664 .
Chr2	stalkie_big_nohaplotig	CDS	95112853	95112854	.	+	0	Parent=comp157040_c0_seq1.mrna1;Target=comp157040_c0_seq1 657 656 .
Chr2	stalkie_big_nohaplotig	CDS	95112973	95112978	.	+	1	Parent=comp157040_c0_seq1.mrna1;Target=comp157040_c0_seq1 663 658 .
Chr2	stalkie_big_nohaplotig	CDS	95113123	95113186	.	+	1	Parent=comp157040_c0_seq1.mrna1;Target=comp157040_c0_seq1 727 664 .
Chr2	stalkie_big_nohaplotig	mRNA	95112585	95112995	.	-	.	ID=comp159922_c0_seq1.mrna1;geneID=comp159922_c0_seq1.path1;Name=comp159922_c0_seq1;Dir=indeterminatecoverage=27.2;identity=97.3;matches=402;mismatches=9;indels=2;unknowns=0;Target=comp159922_c0_seq1 1517 1105 .;CDS_Target=comp159922_c0_seq1 1112 1107 .;locus=RLOC_00019601
Chr2	stalkie_big_nohaplotig	exon	95112585	95112995	97	-	.	Parent=comp159922_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95112989	95112993	.	-	0	Parent=comp159922_c0_seq1.mrna1
Chr2	gffcl	locus	95110825	95110912	.	+	.	ID=RLOC_00019602;geneIDs=comp159464_c0_seq1.path2;transcripts=comp159464_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	95110825	95110912	.	+	.	ID=comp159464_c0_seq1.mrna2;geneID=comp159464_c0_seq1.path2;Name=comp159464_c0_seq1;Dir=indeterminatecoverage=7.2;identity=98.9;matches=87;mismatches=1;indels=0;unknowns=0;Target=comp159464_c0_seq1 1224 1137 .;locus=RLOC_00019602
Chr2	stalkie_big_nohaplotig	exon	95110825	95110912	98	+	.	Parent=comp159464_c0_seq1.mrna2
Chr2	gffcl	locus	95117612	95117960	.	+	.	ID=RLOC_00019603;geneIDs=comp148290_c0_seq1.path1;transcripts=comp148290_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95117612	95117960	.	+	.	ID=comp148290_c0_seq1.mrna1;geneID=comp148290_c0_seq1.path1;Name=comp148290_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=346;mismatches=3;indels=2;unknowns=0;Target=comp148290_c0_seq1 351 1 .;CDS_Target=comp148290_c0_seq1 53 3 .;locus=RLOC_00019603
Chr2	stalkie_big_nohaplotig	exon	95117612	95117960	98	+	.	Parent=comp148290_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95117614	95117664	.	+	0	Parent=comp148290_c0_seq1.mrna1
Chr2	gffcl	locus	95119420	95119908	.	-	.	ID=RLOC_00019604;geneIDs=comp148351_c0_seq1.path1;transcripts=comp148351_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95119420	95119908	.	-	.	ID=comp148351_c0_seq1.mrna1;geneID=comp148351_c0_seq1.path1;Name=comp148351_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=489;mismatches=0;indels=0;unknowns=0;Target=comp148351_c0_seq1 489 1 .;CDS_Target=comp148351_c0_seq1 393 343 .;locus=RLOC_00019604
Chr2	stalkie_big_nohaplotig	exon	95119420	95119908	100	-	.	Parent=comp148351_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95119516	95119566	.	-	0	Parent=comp148351_c0_seq1.mrna1
Chr2	gffcl	locus	95121712	95122411	.	-	.	ID=RLOC_00019605;geneIDs=comp153883_c0_seq1.path1;transcripts=comp153883_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95121712	95122411	.	-	.	ID=comp153883_c0_seq1.mrna1;geneID=comp153883_c0_seq1.path1;Name=comp153883_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=693;mismatches=7;indels=1;unknowns=0;Target=comp153883_c0_seq1 701 1 .;CDS_Target=comp153883_c0_seq1 361 197 .;locus=RLOC_00019605
Chr2	stalkie_big_nohaplotig	exon	95121712	95122411	98	-	.	Parent=comp153883_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95122051	95122215	.	-	0	Parent=comp153883_c0_seq1.mrna1
Chr2	gffcl	locus	95123382	95123628	.	+	.	ID=RLOC_00019606;geneIDs=comp118534_c0_seq1.path1;transcripts=comp118534_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95123382	95123628	.	+	.	ID=comp118534_c0_seq1.mrna1;geneID=comp118534_c0_seq1.path1;Name=comp118534_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=246;mismatches=1;indels=0;unknowns=0;Target=comp118534_c0_seq1 247 1 .;CDS_Target=comp118534_c0_seq1 46 2 .;locus=RLOC_00019606
Chr2	stalkie_big_nohaplotig	exon	95123382	95123628	99	+	.	Parent=comp118534_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95123383	95123427	.	+	0	Parent=comp118534_c0_seq1.mrna1
Chr2	gffcl	locus	95123801	95124420	.	-	.	ID=RLOC_00019607;geneIDs=comp154037_c0_seq1.path1;transcripts=comp154037_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95123801	95124420	.	-	.	ID=comp154037_c0_seq1.mrna1;geneID=comp154037_c0_seq1.path1;Name=comp154037_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=620;mismatches=0;indels=1;unknowns=0;Target=comp154037_c0_seq1 621 1 .;CDS_Target=comp154037_c0_seq1 429 358 .;locus=RLOC_00019607
Chr2	stalkie_big_nohaplotig	exon	95123801	95124420	99	-	.	Parent=comp154037_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95123993	95124064	.	-	0	Parent=comp154037_c0_seq1.mrna1
Chr2	gffcl	locus	95125529	95125970	.	-	.	ID=RLOC_00019608;geneIDs=comp147935_c3_seq1.path1;transcripts=comp147935_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95125529	95125970	.	-	.	ID=comp147935_c3_seq1.mrna1;geneID=comp147935_c3_seq1.path1;Name=comp147935_c3_seq1;Dir=indeterminatecoverage=99.3;identity=98.2;matches=434;mismatches=0;indels=8;unknowns=0;Target=comp147935_c3_seq1 437 4 .;CDS_Target=comp147935_c3_seq1 436 311 .;locus=RLOC_00019608
Chr2	stalkie_big_nohaplotig	exon	95125529	95125970	98	-	.	Parent=comp147935_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95125530	95125655	.	-	0	Parent=comp147935_c3_seq1.mrna1
Chr2	gffcl	locus	95130732	95131521	.	+	.	ID=RLOC_00019609;geneIDs=comp135927_c0_seq1.path1;transcripts=comp135927_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95130732	95131521	.	+	.	ID=comp135927_c0_seq1.mrna1;geneID=comp135927_c0_seq1.path1;Name=comp135927_c0_seq1;Dir=indeterminatecoverage=97.8;identity=99.4;matches=785;mismatches=5;indels=0;unknowns=0;Target=comp135927_c0_seq1 807 18 .;CDS_Target=comp135927_c0_seq1 80 18 .;locus=RLOC_00019609
Chr2	stalkie_big_nohaplotig	exon	95130732	95131521	99	+	.	Parent=comp135927_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95130732	95130794	.	+	0	Parent=comp135927_c0_seq1.mrna1
Chr2	gffcl	locus	95134019	95135256	.	+	.	ID=RLOC_00019610;geneIDs=comp153318_c0_seq1.path1;transcripts=comp153318_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95134019	95135256	.	+	.	ID=comp153318_c0_seq1.mrna1;geneID=comp153318_c0_seq1.path1;Name=comp153318_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1235;mismatches=3;indels=0;unknowns=0;Target=comp153318_c0_seq1 1238 1 .;CDS_Target=comp153318_c0_seq1 248 117 .;locus=RLOC_00019610
Chr2	stalkie_big_nohaplotig	exon	95134019	95135256	99	+	.	Parent=comp153318_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95134135	95134266	.	+	0	Parent=comp153318_c0_seq1.mrna1
Chr2	gffcl	locus	95143747	95154174	.	-	.	ID=RLOC_00019611;geneIDs=comp135960_c0_seq1.path1;transcripts=comp135960_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95143747	95154174	.	-	.	ID=comp135960_c0_seq1.mrna1;geneID=comp135960_c0_seq1.path1;Name=comp135960_c0_seq1;Dir=sensecoverage=100.0;identity=98.6;matches=1224;mismatches=4;indels=14;unknowns=0;locus=RLOC_00019611
Chr2	stalkie_big_nohaplotig	exon	95143747	95144044	99	-	.	Parent=comp135960_c0_seq1.mrna1;Target=comp135960_c0_seq1 935 1232 +
Chr2	stalkie_big_nohaplotig	exon	95144112	95144184	100	-	.	Parent=comp135960_c0_seq1.mrna1;Target=comp135960_c0_seq1 862 934 +
Chr2	stalkie_big_nohaplotig	exon	95144527	95144615	100	-	.	Parent=comp135960_c0_seq1.mrna1;Target=comp135960_c0_seq1 773 861 +
Chr2	stalkie_big_nohaplotig	exon	95146374	95146426	100	-	.	Parent=comp135960_c0_seq1.mrna1;Target=comp135960_c0_seq1 720 772 +
Chr2	stalkie_big_nohaplotig	exon	95146491	95146524	100	-	.	Parent=comp135960_c0_seq1.mrna1;Target=comp135960_c0_seq1 686 719 +
Chr2	stalkie_big_nohaplotig	exon	95146592	95146673	100	-	.	Parent=comp135960_c0_seq1.mrna1;Target=comp135960_c0_seq1 604 685 +
Chr2	stalkie_big_nohaplotig	exon	95153566	95154174	97	-	.	Parent=comp135960_c0_seq1.mrna1;Target=comp135960_c0_seq1 1 603 +
Chr2	stalkie_big_nohaplotig	CDS	95143955	95144044	.	-	0	Parent=comp135960_c0_seq1.mrna1;Target=comp135960_c0_seq1 935 1024 +
Chr2	stalkie_big_nohaplotig	CDS	95144112	95144184	.	-	1	Parent=comp135960_c0_seq1.mrna1;Target=comp135960_c0_seq1 862 934 +
Chr2	stalkie_big_nohaplotig	CDS	95144527	95144615	.	-	0	Parent=comp135960_c0_seq1.mrna1;Target=comp135960_c0_seq1 773 861 +
Chr2	stalkie_big_nohaplotig	CDS	95146374	95146426	.	-	2	Parent=comp135960_c0_seq1.mrna1;Target=comp135960_c0_seq1 720 772 +
Chr2	stalkie_big_nohaplotig	CDS	95146491	95146524	.	-	0	Parent=comp135960_c0_seq1.mrna1;Target=comp135960_c0_seq1 686 719 +
Chr2	stalkie_big_nohaplotig	CDS	95146592	95146669	.	-	0	Parent=comp135960_c0_seq1.mrna1;Target=comp135960_c0_seq1 608 685 +
Chr2	gffcl	locus	95161887	95250875	.	-	.	ID=RLOC_00019612;geneIDs=FBgn0039348.1.path1,comp158773_c2_seq1.path1;transcripts=comp158773_c2_seq1.mrna1,FBgn0039348.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95161887	95250875	.	-	.	ID=comp158773_c2_seq1.mrna1;geneID=comp158773_c2_seq1.path1;Name=comp158773_c2_seq1;Dir=antisensecoverage=50.1;identity=99.8;matches=2755;mismatches=5;indels=1;unknowns=0;locus=RLOC_00019612
Chr2	stalkie_big_nohaplotig	exon	95161887	95162412	100	-	.	Parent=comp158773_c2_seq1.mrna1;Target=comp158773_c2_seq1 2746 3271 -
Chr2	stalkie_big_nohaplotig	exon	95162493	95162908	99	-	.	Parent=comp158773_c2_seq1.mrna1;Target=comp158773_c2_seq1 3272 3687 -
Chr2	stalkie_big_nohaplotig	exon	95241140	95241300	100	-	.	Parent=comp158773_c2_seq1.mrna1;Target=comp158773_c2_seq1 3688 3848 -
Chr2	stalkie_big_nohaplotig	exon	95241370	95241568	100	-	.	Parent=comp158773_c2_seq1.mrna1;Target=comp158773_c2_seq1 3849 4047 -
Chr2	stalkie_big_nohaplotig	exon	95241648	95242173	100	-	.	Parent=comp158773_c2_seq1.mrna1;Target=comp158773_c2_seq1 4048 4573 -
Chr2	stalkie_big_nohaplotig	exon	95244191	95244357	99	-	.	Parent=comp158773_c2_seq1.mrna1;Target=comp158773_c2_seq1 4574 4740 -
Chr2	stalkie_big_nohaplotig	exon	95244411	95244500	100	-	.	Parent=comp158773_c2_seq1.mrna1;Target=comp158773_c2_seq1 4741 4830 -
Chr2	stalkie_big_nohaplotig	exon	95244576	95244719	100	-	.	Parent=comp158773_c2_seq1.mrna1;Target=comp158773_c2_seq1 4831 4974 -
Chr2	stalkie_big_nohaplotig	exon	95250287	95250411	98	-	.	Parent=comp158773_c2_seq1.mrna1;Target=comp158773_c2_seq1 4975 5100 -
Chr2	stalkie_big_nohaplotig	exon	95250470	95250875	99	-	.	Parent=comp158773_c2_seq1.mrna1;Target=comp158773_c2_seq1 5101 5506 -
Chr2	stalkie_big_nohaplotig	CDS	95162217	95162412	.	-	1	Parent=comp158773_c2_seq1.mrna1;Target=comp158773_c2_seq1 3076 3271 .
Chr2	stalkie_big_nohaplotig	CDS	95162493	95162908	.	-	0	Parent=comp158773_c2_seq1.mrna1;Target=comp158773_c2_seq1 3272 3687 .
Chr2	stalkie_big_nohaplotig	CDS	95241140	95241300	.	-	2	Parent=comp158773_c2_seq1.mrna1;Target=comp158773_c2_seq1 3688 3848 .
Chr2	stalkie_big_nohaplotig	CDS	95241370	95241568	.	-	0	Parent=comp158773_c2_seq1.mrna1;Target=comp158773_c2_seq1 3849 4047 .
Chr2	stalkie_big_nohaplotig	CDS	95241648	95242173	.	-	1	Parent=comp158773_c2_seq1.mrna1;Target=comp158773_c2_seq1 4048 4573 .
Chr2	stalkie_big_nohaplotig	CDS	95244191	95244357	.	-	0	Parent=comp158773_c2_seq1.mrna1;Target=comp158773_c2_seq1 4574 4740 .
Chr2	stalkie_big_nohaplotig	CDS	95244411	95244500	.	-	0	Parent=comp158773_c2_seq1.mrna1;Target=comp158773_c2_seq1 4741 4830 .
Chr2	stalkie_big_nohaplotig	CDS	95244576	95244719	.	-	0	Parent=comp158773_c2_seq1.mrna1;Target=comp158773_c2_seq1 4831 4974 .
Chr2	stalkie_big_nohaplotig	CDS	95250287	95250310	.	-	0	Parent=comp158773_c2_seq1.mrna1;Target=comp158773_c2_seq1 4975 4998 .
Chr2	stalkie_big_nohaplotig	mRNA	95162220	95245272	.	-	.	ID=FBgn0039348.1.mrna1;geneID=FBgn0039348.1.path1;Name=FBgn0039348.1;Dir=sensecoverage=100.0;identity=99.9;matches=1996;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019612
Chr2	stalkie_big_nohaplotig	exon	95162220	95162412	100	-	.	Parent=FBgn0039348.1.mrna1;Target=FBgn0039348.1 1806 1998 +
Chr2	stalkie_big_nohaplotig	exon	95162493	95162908	99	-	.	Parent=FBgn0039348.1.mrna1;Target=FBgn0039348.1 1390 1805 +
Chr2	stalkie_big_nohaplotig	exon	95241140	95241300	100	-	.	Parent=FBgn0039348.1.mrna1;Target=FBgn0039348.1 1229 1389 +
Chr2	stalkie_big_nohaplotig	exon	95241370	95241568	100	-	.	Parent=FBgn0039348.1.mrna1;Target=FBgn0039348.1 1030 1228 +
Chr2	stalkie_big_nohaplotig	exon	95241648	95242173	100	-	.	Parent=FBgn0039348.1.mrna1;Target=FBgn0039348.1 504 1029 +
Chr2	stalkie_big_nohaplotig	exon	95244191	95244357	99	-	.	Parent=FBgn0039348.1.mrna1;Target=FBgn0039348.1 337 503 +
Chr2	stalkie_big_nohaplotig	exon	95244411	95244500	100	-	.	Parent=FBgn0039348.1.mrna1;Target=FBgn0039348.1 247 336 +
Chr2	stalkie_big_nohaplotig	exon	95244576	95244719	100	-	.	Parent=FBgn0039348.1.mrna1;Target=FBgn0039348.1 103 246 +
Chr2	stalkie_big_nohaplotig	exon	95245171	95245272	100	-	.	Parent=FBgn0039348.1.mrna1;Target=FBgn0039348.1 1 102 +
Chr2	stalkie_big_nohaplotig	CDS	95162220	95162412	.	-	1	Parent=FBgn0039348.1.mrna1;Target=FBgn0039348.1 1806 1998 +
Chr2	stalkie_big_nohaplotig	CDS	95162493	95162908	.	-	0	Parent=FBgn0039348.1.mrna1;Target=FBgn0039348.1 1390 1805 +
Chr2	stalkie_big_nohaplotig	CDS	95241140	95241300	.	-	2	Parent=FBgn0039348.1.mrna1;Target=FBgn0039348.1 1229 1389 +
Chr2	stalkie_big_nohaplotig	CDS	95241370	95241568	.	-	0	Parent=FBgn0039348.1.mrna1;Target=FBgn0039348.1 1030 1228 +
Chr2	stalkie_big_nohaplotig	CDS	95241648	95242173	.	-	1	Parent=FBgn0039348.1.mrna1;Target=FBgn0039348.1 504 1029 +
Chr2	stalkie_big_nohaplotig	CDS	95244191	95244357	.	-	0	Parent=FBgn0039348.1.mrna1;Target=FBgn0039348.1 337 503 +
Chr2	stalkie_big_nohaplotig	CDS	95244411	95244500	.	-	0	Parent=FBgn0039348.1.mrna1;Target=FBgn0039348.1 247 336 +
Chr2	stalkie_big_nohaplotig	CDS	95244576	95244719	.	-	0	Parent=FBgn0039348.1.mrna1;Target=FBgn0039348.1 103 246 +
Chr2	stalkie_big_nohaplotig	CDS	95245171	95245272	.	-	0	Parent=FBgn0039348.1.mrna1;Target=FBgn0039348.1 1 102 +
Chr2	gffcl	locus	95185393	95186204	.	-	.	ID=RLOC_00019613;geneIDs=comp116830_c0_seq1.path1,comp146383_c0_seq1.path1;transcripts=comp116830_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95185393	95185813	.	-	.	ID=comp116830_c0_seq1.mrna1;geneID=comp116830_c0_seq1.path1;Name=comp116830_c0_seq1;Dir=indeterminatecoverage=99.5;identity=100.0;matches=421;mismatches=0;indels=0;unknowns=0;Target=comp116830_c0_seq1 421 1 .;CDS_Target=comp116830_c0_seq1 399 283 .;locus=RLOC_00019613
Chr2	stalkie_big_nohaplotig	exon	95185393	95185813	100	-	.	Parent=comp116830_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95185415	95185531	.	-	0	Parent=comp116830_c0_seq1.mrna1
Chr2	gffcl	locus	95224121	95224855	.	+	.	ID=RLOC_00019614;geneIDs=FBgn0039347.path1;transcripts=FBgn0039347.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95224121	95224855	.	+	.	ID=FBgn0039347.mrna1;geneID=FBgn0039347.path1;Name=FBgn0039347;Dir=indeterminatecoverage=100.0;identity=99.6;matches=732;mismatches=3;indels=0;unknowns=0;Target=FBgn0039347 735 1 .;locus=RLOC_00019614
Chr2	stalkie_big_nohaplotig	exon	95224121	95224855	99	+	.	Parent=FBgn0039347.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95224121	95224855	.	+	0	Parent=FBgn0039347.mrna1
Chr2	gffcl	locus	95226481	95227213	.	+	.	ID=RLOC_00019615;geneIDs=comp149309_c1_seq1.path1;transcripts=comp149309_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95226481	95227213	.	+	.	ID=comp149309_c1_seq1.mrna1;geneID=comp149309_c1_seq1.path1;Name=comp149309_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=725;mismatches=3;indels=6;unknowns=0;Target=comp149309_c1_seq1 729 1 .;CDS_Target=comp149309_c1_seq1 417 304 .;locus=RLOC_00019615
Chr2	stalkie_big_nohaplotig	exon	95226481	95227213	98	+	.	Parent=comp149309_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95226787	95226902	.	+	0	Parent=comp149309_c1_seq1.mrna1
Chr2	gffcl	locus	95233325	95233591	.	-	.	ID=RLOC_00019616;geneIDs=comp98130_c0_seq1.path1;transcripts=comp98130_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95233325	95233591	.	-	.	ID=comp98130_c0_seq1.mrna1;geneID=comp98130_c0_seq1.path1;Name=comp98130_c0_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=267;mismatches=0;indels=0;unknowns=0;Target=comp98130_c0_seq1 268 2 .;CDS_Target=comp98130_c0_seq1 179 72 .;locus=RLOC_00019616
Chr2	stalkie_big_nohaplotig	exon	95233325	95233591	100	-	.	Parent=comp98130_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95233414	95233521	.	-	0	Parent=comp98130_c0_seq1.mrna1
Chr2	gffcl	locus	95234302	95234824	.	+	.	ID=RLOC_00019617;geneIDs=comp141131_c0_seq1.path1;transcripts=comp141131_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95234302	95234824	.	+	.	ID=comp141131_c0_seq1.mrna1;geneID=comp141131_c0_seq1.path1;Name=comp141131_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=522;mismatches=1;indels=0;unknowns=0;Target=comp141131_c0_seq1 523 1 .;CDS_Target=comp141131_c0_seq1 92 30 .;locus=RLOC_00019617
Chr2	stalkie_big_nohaplotig	exon	95234302	95234824	99	+	.	Parent=comp141131_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95234331	95234393	.	+	0	Parent=comp141131_c0_seq1.mrna1
Chr2	gffcl	locus	95234900	95235376	.	-	.	ID=RLOC_00019618;geneIDs=comp147105_c0_seq1.path1;transcripts=comp147105_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95234900	95235376	.	-	.	ID=comp147105_c0_seq1.mrna1;geneID=comp147105_c0_seq1.path1;Name=comp147105_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=473;mismatches=4;indels=0;unknowns=0;Target=comp147105_c0_seq1 477 1 .;CDS_Target=comp147105_c0_seq1 390 289 .;locus=RLOC_00019618
Chr2	stalkie_big_nohaplotig	exon	95234900	95235376	99	-	.	Parent=comp147105_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95234987	95235088	.	-	0	Parent=comp147105_c0_seq1.mrna1
Chr2	gffcl	locus	95236441	95237603	.	+	.	ID=RLOC_00019619;geneIDs=comp152244_c0_seq1.path1;transcripts=comp152244_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95236441	95237603	.	+	.	ID=comp152244_c0_seq1.mrna1;geneID=comp152244_c0_seq1.path1;Name=comp152244_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1160;mismatches=2;indels=1;unknowns=0;Target=comp152244_c0_seq1 1162 1 .;CDS_Target=comp152244_c0_seq1 42 1 .;locus=RLOC_00019619
Chr2	stalkie_big_nohaplotig	exon	95236441	95237603	99	+	.	Parent=comp152244_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95236441	95236483	.	+	0	Parent=comp152244_c0_seq1.mrna1
Chr2	gffcl	locus	95237774	95238624	.	-	.	ID=RLOC_00019620;geneIDs=comp178558_c0_seq1.path1;transcripts=comp178558_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95237774	95238624	.	-	.	ID=comp178558_c0_seq1.mrna1;geneID=comp178558_c0_seq1.path1;Name=comp178558_c0_seq1;Dir=indeterminatecoverage=98.2;identity=98.9;matches=846;mismatches=1;indels=8;unknowns=0;Target=comp178558_c0_seq1 851 1 .;CDS_Target=comp178558_c0_seq1 561 481 .;locus=RLOC_00019620
Chr2	stalkie_big_nohaplotig	exon	95237774	95238624	98	-	.	Parent=comp178558_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95238064	95238144	.	-	0	Parent=comp178558_c0_seq1.mrna1
Chr2	gffcl	locus	95323624	95324386	.	+	.	ID=RLOC_00019621;geneIDs=comp151329_c0_seq1.path1;transcripts=comp151329_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95323624	95324386	.	+	.	ID=comp151329_c0_seq1.mrna1;geneID=comp151329_c0_seq1.path1;Name=comp151329_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.3;matches=761;mismatches=2;indels=3;unknowns=0;Target=comp151329_c0_seq1 770 5 .;CDS_Target=comp151329_c0_seq1 115 5 .;locus=RLOC_00019621
Chr2	stalkie_big_nohaplotig	exon	95323624	95324386	99	+	.	Parent=comp151329_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95323624	95323734	.	+	0	Parent=comp151329_c0_seq1.mrna1
Chr2	gffcl	locus	95329678	95363182	.	-	.	ID=RLOC_00019622;geneIDs=FBgn0038294.1.path1,comp47584_c0_seq1.path1,comp116425_c0_seq1.path1,comp133740_c0_seq1.path1,comp153376_c0_seq1.path1,comp170541_c0_seq1.path1;transcripts=FBgn0038294.1.mrna1,comp170541_c0_seq1.mrna1,comp116425_c0_seq1.mrna1,comp153376_c0_seq1.mrna1,comp133740_c0_seq1.mrna1,comp47584_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95329678	95363182	.	-	.	ID=FBgn0038294.1.mrna1;geneID=FBgn0038294.1.path1;Name=FBgn0038294.1;Dir=sensecoverage=100.0;identity=99.8;matches=1042;mismatches=1;indels=1;unknowns=0;locus=RLOC_00019622
Chr2	stalkie_big_nohaplotig	exon	95329678	95329694	100	-	.	Parent=FBgn0038294.1.mrna1;Target=FBgn0038294.1 1028 1044 +
Chr2	stalkie_big_nohaplotig	exon	95331447	95331677	100	-	.	Parent=FBgn0038294.1.mrna1;Target=FBgn0038294.1 797 1027 +
Chr2	stalkie_big_nohaplotig	exon	95332575	95332910	100	-	.	Parent=FBgn0038294.1.mrna1;Target=FBgn0038294.1 461 796 +
Chr2	stalkie_big_nohaplotig	exon	95353809	95353918	100	-	.	Parent=FBgn0038294.1.mrna1;Target=FBgn0038294.1 351 460 +
Chr2	stalkie_big_nohaplotig	exon	95356210	95356279	100	-	.	Parent=FBgn0038294.1.mrna1;Target=FBgn0038294.1 281 350 +
Chr2	stalkie_big_nohaplotig	exon	95359925	95360137	100	-	.	Parent=FBgn0038294.1.mrna1;Target=FBgn0038294.1 68 280 +
Chr2	stalkie_big_nohaplotig	exon	95363117	95363182	97	-	.	Parent=FBgn0038294.1.mrna1;Target=FBgn0038294.1 1 67 +
Chr2	stalkie_big_nohaplotig	CDS	95360113	95360137	.	-	2	Parent=FBgn0038294.1.mrna1;Target=FBgn0038294.1 68 92 +
Chr2	stalkie_big_nohaplotig	CDS	95363117	95363180	.	-	0	Parent=FBgn0038294.1.mrna1;Target=FBgn0038294.1 3 67 +
Chr2	stalkie_big_nohaplotig	mRNA	95331655	95332724	.	-	.	ID=comp170541_c0_seq1.mrna1;geneID=comp170541_c0_seq1.path1;Name=comp170541_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=238;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019622
Chr2	stalkie_big_nohaplotig	exon	95331655	95331868	100	-	.	Parent=comp170541_c0_seq1.mrna1;Target=comp170541_c0_seq1 1 214 -
Chr2	stalkie_big_nohaplotig	exon	95332701	95332724	100	-	.	Parent=comp170541_c0_seq1.mrna1;Target=comp170541_c0_seq1 215 238 -
Chr2	stalkie_big_nohaplotig	CDS	95331656	95331868	.	-	0	Parent=comp170541_c0_seq1.mrna1;Target=comp170541_c0_seq1 2 214 .
Chr2	stalkie_big_nohaplotig	CDS	95332701	95332724	.	-	0	Parent=comp170541_c0_seq1.mrna1;Target=comp170541_c0_seq1 215 238 .
Chr2	stalkie_big_nohaplotig	mRNA	95331845	95332597	.	-	.	ID=comp116425_c0_seq1.mrna1;geneID=comp116425_c0_seq1.path1;Name=comp116425_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=753;mismatches=0;indels=0;unknowns=0;Target=comp116425_c0_seq1 753 1 .;CDS_Target=comp116425_c0_seq1 131 3 .;locus=RLOC_00019622
Chr2	stalkie_big_nohaplotig	exon	95331845	95332597	100	-	.	Parent=comp116425_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95332467	95332595	.	-	0	Parent=comp116425_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95355252	95356233	.	-	.	ID=comp153376_c0_seq1.mrna1;geneID=comp153376_c0_seq1.path1;Name=comp153376_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=974;mismatches=8;indels=0;unknowns=0;Target=comp153376_c0_seq1 982 1 .;CDS_Target=comp153376_c0_seq1 249 157 .;locus=RLOC_00019622
Chr2	stalkie_big_nohaplotig	exon	95355252	95356233	99	-	.	Parent=comp153376_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95355985	95356077	.	-	0	Parent=comp153376_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95356257	95357562	.	-	.	ID=comp133740_c0_seq1.mrna1;geneID=comp133740_c0_seq1.path1;Name=comp133740_c0_seq1;Dir=antisensecoverage=100.0;identity=97.9;matches=1169;mismatches=6;indels=19;unknowns=0;locus=RLOC_00019622
Chr2	stalkie_big_nohaplotig	exon	95356257	95356279	100	-	.	Parent=comp133740_c0_seq1.mrna1;Target=comp133740_c0_seq1 1 23 -
Chr2	stalkie_big_nohaplotig	exon	95356392	95357562	97	-	.	Parent=comp133740_c0_seq1.mrna1;Target=comp133740_c0_seq1 24 1175 -
Chr2	stalkie_big_nohaplotig	CDS	95356259	95356279	.	-	0	Parent=comp133740_c0_seq1.mrna1;Target=comp133740_c0_seq1 3 23 .
Chr2	stalkie_big_nohaplotig	CDS	95356392	95356484	.	-	0	Parent=comp133740_c0_seq1.mrna1;Target=comp133740_c0_seq1 24 116 .
Chr2	stalkie_big_nohaplotig	mRNA	95359745	95359947	.	-	.	ID=comp47584_c0_seq1.mrna1;geneID=comp47584_c0_seq1.path1;Name=comp47584_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=202;mismatches=1;indels=0;unknowns=0;Target=comp47584_c0_seq1 203 1 .;CDS_Target=comp47584_c0_seq1 62 3 .;locus=RLOC_00019622
Chr2	stalkie_big_nohaplotig	exon	95359745	95359947	99	-	.	Parent=comp47584_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95359886	95359945	.	-	0	Parent=comp47584_c0_seq1.mrna1
Chr2	gffcl	locus	95330143	95330651	.	-	.	ID=RLOC_00019623;geneIDs=comp135081_c0_seq1.path1;transcripts=comp135081_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95330143	95330651	.	-	.	ID=comp135081_c0_seq1.mrna1;geneID=comp135081_c0_seq1.path1;Name=comp135081_c0_seq1;Dir=indeterminatecoverage=98.6;identity=99.4;matches=507;mismatches=2;indels=1;unknowns=0;Target=comp135081_c0_seq1 517 8 .;CDS_Target=comp135081_c0_seq1 363 265 .;locus=RLOC_00019623
Chr2	stalkie_big_nohaplotig	exon	95330143	95330651	99	-	.	Parent=comp135081_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95330297	95330395	.	-	0	Parent=comp135081_c0_seq1.mrna1
Chr2	gffcl	locus	95333333	95333922	.	-	.	ID=RLOC_00019624;geneIDs=comp87484_c0_seq1.path1;transcripts=comp87484_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95333333	95333922	.	-	.	ID=comp87484_c0_seq1.mrna1;geneID=comp87484_c0_seq1.path1;Name=comp87484_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=588;mismatches=2;indels=0;unknowns=0;Target=comp87484_c0_seq1 590 1 .;CDS_Target=comp87484_c0_seq1 488 336 .;locus=RLOC_00019624
Chr2	stalkie_big_nohaplotig	exon	95333333	95333922	99	-	.	Parent=comp87484_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95333435	95333587	.	-	0	Parent=comp87484_c0_seq1.mrna1
Chr2	gffcl	locus	95342978	95343567	.	-	.	ID=RLOC_00019625;geneIDs=comp87484_c0_seq1.path2;transcripts=comp87484_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	95342978	95343567	.	-	.	ID=comp87484_c0_seq1.mrna2;geneID=comp87484_c0_seq1.path2;Name=comp87484_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=588;mismatches=2;indels=0;unknowns=0;Target=comp87484_c0_seq1 590 1 .;CDS_Target=comp87484_c0_seq1 488 336 .;locus=RLOC_00019625
Chr2	stalkie_big_nohaplotig	exon	95342978	95343567	99	-	.	Parent=comp87484_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	95343080	95343232	.	-	0	Parent=comp87484_c0_seq1.mrna2
Chr2	gffcl	locus	95344943	95345646	.	-	.	ID=RLOC_00019626;geneIDs=comp82935_c0_seq1.path1;transcripts=comp82935_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95344943	95345646	.	-	.	ID=comp82935_c0_seq1.mrna1;geneID=comp82935_c0_seq1.path1;Name=comp82935_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.6;matches=701;mismatches=3;indels=0;unknowns=0;Target=comp82935_c0_seq1 705 2 .;CDS_Target=comp82935_c0_seq1 371 240 .;locus=RLOC_00019626
Chr2	stalkie_big_nohaplotig	exon	95344943	95345646	99	-	.	Parent=comp82935_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95345277	95345408	.	-	0	Parent=comp82935_c0_seq1.mrna1
Chr2	gffcl	locus	95345938	95346520	.	+	.	ID=RLOC_00019627;geneIDs=comp146783_c0_seq1.path1;transcripts=comp146783_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95345938	95346520	.	+	.	ID=comp146783_c0_seq1.mrna1;geneID=comp146783_c0_seq1.path1;Name=comp146783_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=581;mismatches=2;indels=0;unknowns=0;Target=comp146783_c0_seq1 583 1 .;CDS_Target=comp146783_c0_seq1 119 63 .;locus=RLOC_00019627
Chr2	stalkie_big_nohaplotig	exon	95345938	95346520	99	+	.	Parent=comp146783_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95346000	95346056	.	+	0	Parent=comp146783_c0_seq1.mrna1
Chr2	gffcl	locus	95347721	95348330	.	-	.	ID=RLOC_00019628;geneIDs=comp142276_c0_seq1.path1;transcripts=comp142276_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95347721	95348330	.	-	.	ID=comp142276_c0_seq1.mrna1;geneID=comp142276_c0_seq1.path1;Name=comp142276_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=610;mismatches=0;indels=1;unknowns=0;Target=comp142276_c0_seq1 611 1 .;CDS_Target=comp142276_c0_seq1 52 2 .;locus=RLOC_00019628
Chr2	stalkie_big_nohaplotig	exon	95347721	95348330	99	-	.	Parent=comp142276_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95348279	95348329	.	-	0	Parent=comp142276_c0_seq1.mrna1
Chr2	gffcl	locus	95350990	95351597	.	-	.	ID=RLOC_00019629;geneIDs=comp149916_c0_seq1.path1;transcripts=comp149916_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95350990	95351597	.	-	.	ID=comp149916_c0_seq1.mrna1;geneID=comp149916_c0_seq1.path1;Name=comp149916_c0_seq1;Dir=indeterminatecoverage=91.2;identity=99.7;matches=606;mismatches=2;indels=0;unknowns=0;Target=comp149916_c0_seq1 608 1 .;CDS_Target=comp149916_c0_seq1 31 2 .;locus=RLOC_00019629
Chr2	stalkie_big_nohaplotig	exon	95350990	95351597	99	-	.	Parent=comp149916_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95351567	95351596	.	-	0	Parent=comp149916_c0_seq1.mrna1
Chr2	gffcl	locus	95352192	95352800	.	+	.	ID=RLOC_00019630;geneIDs=comp148554_c0_seq1.path1;transcripts=comp148554_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95352192	95352800	.	+	.	ID=comp148554_c0_seq1.mrna1;geneID=comp148554_c0_seq1.path1;Name=comp148554_c0_seq1;Dir=indeterminatecoverage=99.0;identity=98.5;matches=609;mismatches=0;indels=9;unknowns=0;Target=comp148554_c0_seq1 620 3 .;CDS_Target=comp148554_c0_seq1 441 346 .;locus=RLOC_00019630
Chr2	stalkie_big_nohaplotig	exon	95352192	95352800	98	+	.	Parent=comp148554_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95352526	95352621	.	+	0	Parent=comp148554_c0_seq1.mrna1
Chr2	gffcl	locus	95354704	95355124	.	-	.	ID=RLOC_00019631;geneIDs=comp158249_c0_seq1.path1;transcripts=comp158249_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95354704	95355124	.	-	.	ID=comp158249_c0_seq1.mrna1;geneID=comp158249_c0_seq1.path1;Name=comp158249_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=420;mismatches=1;indels=0;unknowns=0;Target=comp158249_c0_seq1 421 1 .;CDS_Target=comp158249_c0_seq1 269 210 .;locus=RLOC_00019631
Chr2	stalkie_big_nohaplotig	exon	95354704	95355124	99	-	.	Parent=comp158249_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95354856	95354915	.	-	0	Parent=comp158249_c0_seq1.mrna1
Chr2	gffcl	locus	95357866	96465087	.	+	.	ID=RLOC_00019632;geneIDs=comp148429_c0_seq1.path1;transcripts=comp148429_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95357866	96465087	.	+	.	ID=comp148429_c0_seq1.mrna1;geneID=comp148429_c0_seq1.path1;Name=comp148429_c0_seq1;Dir=indeterminatecoverage=58.6;identity=99.2;matches=1043;mismatches=7;indels=1;unknowns=0;locus=RLOC_00019632
Chr2	stalkie_big_nohaplotig	exon	95357866	95358764	99	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 900 1 .
Chr2	stalkie_big_nohaplotig	exon	96291290	96291291	100	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 902 901 .
Chr2	stalkie_big_nohaplotig	exon	96298039	96298043	100	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 907 903 .
Chr2	stalkie_big_nohaplotig	exon	96305076	96305080	100	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 912 908 .
Chr2	stalkie_big_nohaplotig	exon	96305839	96305844	100	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 918 913 .
Chr2	stalkie_big_nohaplotig	exon	96309154	96309156	100	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 921 919 .
Chr2	stalkie_big_nohaplotig	exon	96315016	96315022	100	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 928 922 .
Chr2	stalkie_big_nohaplotig	exon	96330726	96330731	100	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 934 929 .
Chr2	stalkie_big_nohaplotig	exon	96333902	96333908	100	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 941 935 .
Chr2	stalkie_big_nohaplotig	exon	96337343	96337350	100	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 949 942 .
Chr2	stalkie_big_nohaplotig	exon	96348593	96348600	100	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 969 962 .
Chr2	stalkie_big_nohaplotig	exon	96356035	96356043	88	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 979 971 .
Chr2	stalkie_big_nohaplotig	exon	96360930	96360936	85	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 986 980 .
Chr2	stalkie_big_nohaplotig	exon	96373626	96373631	100	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 992 987 .
Chr2	stalkie_big_nohaplotig	exon	96380122	96380125	100	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 996 993 .
Chr2	stalkie_big_nohaplotig	exon	96380368	96380370	100	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 999 997 .
Chr2	stalkie_big_nohaplotig	exon	96396421	96396426	100	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 1005 1000 .
Chr2	stalkie_big_nohaplotig	exon	96402937	96402945	77	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 1014 1006 .
Chr2	stalkie_big_nohaplotig	exon	96410060	96410068	100	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 1023 1015 .
Chr2	stalkie_big_nohaplotig	exon	96416804	96416808	100	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 1028 1024 .
Chr2	stalkie_big_nohaplotig	exon	96421704	96421705	100	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 1030 1029 .
Chr2	stalkie_big_nohaplotig	exon	96426215	96426222	100	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 1038 1031 .
Chr2	stalkie_big_nohaplotig	exon	96435126	96435130	100	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 1043 1039 .
Chr2	stalkie_big_nohaplotig	exon	96441006	96441011	83	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 1049 1044 .
Chr2	stalkie_big_nohaplotig	exon	96446870	96446872	100	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 1052 1050 .
Chr2	stalkie_big_nohaplotig	exon	96449440	96449444	100	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 1057 1053 .
Chr2	stalkie_big_nohaplotig	exon	96465083	96465087	100	+	.	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 1062 1058 .
Chr2	stalkie_big_nohaplotig	CDS	96356035	96356043	.	+	2	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 979 971 .
Chr2	stalkie_big_nohaplotig	CDS	96360930	96360936	.	+	2	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 986 980 .
Chr2	stalkie_big_nohaplotig	CDS	96373626	96373631	.	+	1	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 992 987 .
Chr2	stalkie_big_nohaplotig	CDS	96380122	96380125	.	+	1	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 996 993 .
Chr2	stalkie_big_nohaplotig	CDS	96380368	96380370	.	+	0	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 999 997 .
Chr2	stalkie_big_nohaplotig	CDS	96396421	96396426	.	+	0	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 1005 1000 .
Chr2	stalkie_big_nohaplotig	CDS	96402937	96402945	.	+	0	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 1014 1006 .
Chr2	stalkie_big_nohaplotig	CDS	96410060	96410068	.	+	0	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 1023 1015 .
Chr2	stalkie_big_nohaplotig	CDS	96416804	96416808	.	+	0	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 1028 1024 .
Chr2	stalkie_big_nohaplotig	CDS	96421704	96421705	.	+	1	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 1030 1029 .
Chr2	stalkie_big_nohaplotig	CDS	96426215	96426222	.	+	2	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 1038 1031 .
Chr2	stalkie_big_nohaplotig	CDS	96435126	96435130	.	+	0	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 1043 1039 .
Chr2	stalkie_big_nohaplotig	CDS	96441006	96441011	.	+	1	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 1049 1044 .
Chr2	stalkie_big_nohaplotig	CDS	96446870	96446872	.	+	1	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 1052 1050 .
Chr2	stalkie_big_nohaplotig	CDS	96449440	96449444	.	+	1	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 1057 1053 .
Chr2	stalkie_big_nohaplotig	CDS	96465083	96465086	.	+	2	Parent=comp148429_c0_seq1.mrna1;Target=comp148429_c0_seq1 1061 1058 .
Chr2	stalkie_big_nohaplotig	mRNA	95374415	95374717	.	+	.	ID=comp135545_c0_seq1.mrna1;geneID=comp135545_c0_seq1.path1;Name=comp135545_c0_seq1;Dir=indeterminatecoverage=88.7;identity=99.0;matches=303;mismatches=0;indels=3;unknowns=0;Target=comp135545_c0_seq1 329 24 .;CDS_Target=comp135545_c0_seq1 327 247 .;locus=RLOC_00019633
Chr2	stalkie_big_nohaplotig	exon	95374415	95374717	99	+	.	Parent=comp135545_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95374635	95374715	.	+	0	Parent=comp135545_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95476377	95477070	.	-	.	ID=comp147598_c0_seq1.mrna1;geneID=comp147598_c0_seq1.path1;Name=comp147598_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=691;mismatches=3;indels=0;unknowns=0;Target=comp147598_c0_seq1 694 1 .;CDS_Target=comp147598_c0_seq1 343 257 .;locus=RLOC_00019633
Chr2	stalkie_big_nohaplotig	exon	95476377	95477070	99	-	.	Parent=comp147598_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95476728	95476814	.	-	0	Parent=comp147598_c0_seq1.mrna1
Chr2	gffcl	locus	95422380	95422753	.	-	.	ID=RLOC_00019634;geneIDs=comp142707_c0_seq1.path1;transcripts=comp142707_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95422380	95422753	.	-	.	ID=comp142707_c0_seq1.mrna1;geneID=comp142707_c0_seq1.path1;Name=comp142707_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=373;mismatches=1;indels=0;unknowns=0;Target=comp142707_c0_seq1 374 1 .;CDS_Target=comp142707_c0_seq1 371 297 .;locus=RLOC_00019634
Chr2	stalkie_big_nohaplotig	exon	95422380	95422753	99	-	.	Parent=comp142707_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95422383	95422457	.	-	0	Parent=comp142707_c0_seq1.mrna1
Chr2	gffcl	locus	95423417	95423962	.	+	.	ID=RLOC_00019635;geneIDs=comp149972_c0_seq1.path1;transcripts=comp149972_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95423417	95423962	.	+	.	ID=comp149972_c0_seq1.mrna1;geneID=comp149972_c0_seq1.path1;Name=comp149972_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=546;mismatches=0;indels=0;unknowns=0;Target=comp149972_c0_seq1 546 1 .;CDS_Target=comp149972_c0_seq1 428 339 .;locus=RLOC_00019635
Chr2	stalkie_big_nohaplotig	exon	95423417	95423962	100	+	.	Parent=comp149972_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95423755	95423844	.	+	0	Parent=comp149972_c0_seq1.mrna1
Chr2	gffcl	locus	95426310	95434325	.	-	.	ID=RLOC_00019637;geneIDs=FBgn0038296.1.path1;transcripts=FBgn0038296.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95426310	95434325	.	-	.	ID=FBgn0038296.1.mrna1;geneID=FBgn0038296.1.path1;Name=FBgn0038296.1;Dir=sensecoverage=100.0;identity=99.9;matches=4142;mismatches=4;indels=0;unknowns=0;locus=RLOC_00019637
Chr2	stalkie_big_nohaplotig	exon	95426310	95426632	100	-	.	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 3824 4146 +
Chr2	stalkie_big_nohaplotig	exon	95426693	95426933	100	-	.	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 3583 3823 +
Chr2	stalkie_big_nohaplotig	exon	95426996	95427361	100	-	.	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 3217 3582 +
Chr2	stalkie_big_nohaplotig	exon	95427456	95427816	99	-	.	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 2856 3216 +
Chr2	stalkie_big_nohaplotig	exon	95427970	95428132	100	-	.	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 2693 2855 +
Chr2	stalkie_big_nohaplotig	exon	95429139	95429265	100	-	.	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 2566 2692 +
Chr2	stalkie_big_nohaplotig	exon	95429337	95429450	100	-	.	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 2452 2565 +
Chr2	stalkie_big_nohaplotig	exon	95429532	95429720	100	-	.	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 2263 2451 +
Chr2	stalkie_big_nohaplotig	exon	95429800	95429953	100	-	.	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 2109 2262 +
Chr2	stalkie_big_nohaplotig	exon	95430010	95430076	100	-	.	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 2042 2108 +
Chr2	stalkie_big_nohaplotig	exon	95430135	95430447	100	-	.	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 1729 2041 +
Chr2	stalkie_big_nohaplotig	exon	95430509	95430708	99	-	.	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 1529 1728 +
Chr2	stalkie_big_nohaplotig	exon	95430768	95430850	100	-	.	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 1446 1528 +
Chr2	stalkie_big_nohaplotig	exon	95430914	95431183	99	-	.	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 1176 1445 +
Chr2	stalkie_big_nohaplotig	exon	95431238	95431708	100	-	.	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 705 1175 +
Chr2	stalkie_big_nohaplotig	exon	95431787	95431932	100	-	.	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 559 704 +
Chr2	stalkie_big_nohaplotig	exon	95433679	95433925	100	-	.	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 312 558 +
Chr2	stalkie_big_nohaplotig	exon	95434015	95434325	100	-	.	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 1 311 +
Chr2	stalkie_big_nohaplotig	CDS	95426310	95426632	.	-	2	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 3824 4146 +
Chr2	stalkie_big_nohaplotig	CDS	95426693	95426933	.	-	0	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 3583 3823 +
Chr2	stalkie_big_nohaplotig	CDS	95426996	95427361	.	-	0	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 3217 3582 +
Chr2	stalkie_big_nohaplotig	CDS	95427456	95427816	.	-	1	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 2856 3216 +
Chr2	stalkie_big_nohaplotig	CDS	95427970	95428132	.	-	2	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 2693 2855 +
Chr2	stalkie_big_nohaplotig	CDS	95429139	95429265	.	-	0	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 2566 2692 +
Chr2	stalkie_big_nohaplotig	CDS	95429337	95429450	.	-	0	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 2452 2565 +
Chr2	stalkie_big_nohaplotig	CDS	95429532	95429720	.	-	0	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 2263 2451 +
Chr2	stalkie_big_nohaplotig	CDS	95429800	95429953	.	-	1	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 2109 2262 +
Chr2	stalkie_big_nohaplotig	CDS	95430010	95430076	.	-	2	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 2042 2108 +
Chr2	stalkie_big_nohaplotig	CDS	95430135	95430447	.	-	0	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 1729 2041 +
Chr2	stalkie_big_nohaplotig	CDS	95430509	95430708	.	-	2	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 1529 1728 +
Chr2	stalkie_big_nohaplotig	CDS	95430768	95430850	.	-	1	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 1446 1528 +
Chr2	stalkie_big_nohaplotig	CDS	95430914	95431183	.	-	1	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 1176 1445 +
Chr2	stalkie_big_nohaplotig	CDS	95431238	95431708	.	-	1	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 705 1175 +
Chr2	stalkie_big_nohaplotig	CDS	95431787	95431932	.	-	0	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 559 704 +
Chr2	stalkie_big_nohaplotig	CDS	95433679	95433925	.	-	1	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 312 558 +
Chr2	stalkie_big_nohaplotig	CDS	95434015	95434325	.	-	0	Parent=FBgn0038296.1.mrna1;Target=FBgn0038296.1 1 311 +
Chr2	gffcl	locus	95439672	95444158	.	-	.	ID=RLOC_00019638;geneIDs=FBgn0037466.1.path1,comp88420_c0_seq1.path1;transcripts=FBgn0037466.1.mrna1,comp88420_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95439672	95444158	.	-	.	ID=FBgn0037466.1.mrna1;geneID=FBgn0037466.1.path1;Name=FBgn0037466.1;Dir=sensecoverage=100.0;identity=100.0;matches=2146;mismatches=0;indels=0;unknowns=8;locus=RLOC_00019638
Chr2	stalkie_big_nohaplotig	exon	95439672	95439720	100	-	.	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 2106 2154 +
Chr2	stalkie_big_nohaplotig	exon	95439786	95439949	100	-	.	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 1942 2105 +
Chr2	stalkie_big_nohaplotig	exon	95440476	95440635	100	-	.	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 1782 1941 +
Chr2	stalkie_big_nohaplotig	exon	95440703	95440895	100	-	.	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 1589 1781 +
Chr2	stalkie_big_nohaplotig	exon	95440950	95441154	100	-	.	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 1384 1588 +
Chr2	stalkie_big_nohaplotig	exon	95441219	95441556	100	-	.	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 1046 1383 +
Chr2	stalkie_big_nohaplotig	exon	95441921	95442044	100	-	.	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 922 1045 +
Chr2	stalkie_big_nohaplotig	exon	95442475	95442664	100	-	.	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 732 921 +
Chr2	stalkie_big_nohaplotig	exon	95442720	95443017	100	-	.	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 434 731 +
Chr2	stalkie_big_nohaplotig	exon	95443160	95443336	100	-	.	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 257 433 +
Chr2	stalkie_big_nohaplotig	exon	95443392	95443620	100	-	.	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 28 256 +
Chr2	stalkie_big_nohaplotig	exon	95444132	95444158	100	-	.	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 1 27 +
Chr2	stalkie_big_nohaplotig	CDS	95439672	95439720	.	-	1	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 2106 2154 +
Chr2	stalkie_big_nohaplotig	CDS	95439786	95439949	.	-	0	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 1942 2105 +
Chr2	stalkie_big_nohaplotig	CDS	95440476	95440635	.	-	1	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 1782 1941 +
Chr2	stalkie_big_nohaplotig	CDS	95440703	95440895	.	-	2	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 1589 1781 +
Chr2	stalkie_big_nohaplotig	CDS	95440950	95441154	.	-	0	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 1384 1588 +
Chr2	stalkie_big_nohaplotig	CDS	95441219	95441556	.	-	2	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 1046 1383 +
Chr2	stalkie_big_nohaplotig	CDS	95441921	95442044	.	-	0	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 922 1045 +
Chr2	stalkie_big_nohaplotig	CDS	95442475	95442664	.	-	1	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 732 921 +
Chr2	stalkie_big_nohaplotig	CDS	95442720	95443017	.	-	2	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 434 731 +
Chr2	stalkie_big_nohaplotig	CDS	95443160	95443336	.	-	2	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 257 433 +
Chr2	stalkie_big_nohaplotig	CDS	95443392	95443620	.	-	0	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 28 256 +
Chr2	stalkie_big_nohaplotig	CDS	95444132	95444158	.	-	0	Parent=FBgn0037466.1.mrna1;Target=FBgn0037466.1 1 27 +
Chr2	stalkie_big_nohaplotig	mRNA	95441533	95441944	.	-	.	ID=comp88420_c0_seq1.mrna1;geneID=comp88420_c0_seq1.path1;Name=comp88420_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=412;mismatches=0;indels=0;unknowns=0;Target=comp88420_c0_seq1 412 1 .;CDS_Target=comp88420_c0_seq1 410 318 .;locus=RLOC_00019638
Chr2	stalkie_big_nohaplotig	exon	95441533	95441944	100	-	.	Parent=comp88420_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95441535	95441627	.	-	0	Parent=comp88420_c0_seq1.mrna1
Chr2	gffcl	locus	95447150	95450637	.	+	.	ID=RLOC_00019639;geneIDs=FBgn0037465.1.path1;transcripts=FBgn0037465.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95447150	95450637	.	+	.	ID=FBgn0037465.1.mrna1;geneID=FBgn0037465.1.path1;Name=FBgn0037465.1;Dir=sensecoverage=100.0;identity=99.9;matches=1175;mismatches=0;indels=1;unknowns=0;locus=RLOC_00019639
Chr2	stalkie_big_nohaplotig	exon	95447150	95447176	96	+	.	Parent=FBgn0037465.1.mrna1;Target=FBgn0037465.1 1 28 +
Chr2	stalkie_big_nohaplotig	exon	95448130	95448285	100	+	.	Parent=FBgn0037465.1.mrna1;Target=FBgn0037465.1 29 184 +
Chr2	stalkie_big_nohaplotig	exon	95448349	95448560	100	+	.	Parent=FBgn0037465.1.mrna1;Target=FBgn0037465.1 185 396 +
Chr2	stalkie_big_nohaplotig	exon	95448629	95449000	100	+	.	Parent=FBgn0037465.1.mrna1;Target=FBgn0037465.1 397 768 +
Chr2	stalkie_big_nohaplotig	exon	95450167	95450425	100	+	.	Parent=FBgn0037465.1.mrna1;Target=FBgn0037465.1 769 1027 +
Chr2	stalkie_big_nohaplotig	exon	95450489	95450637	100	+	.	Parent=FBgn0037465.1.mrna1;Target=FBgn0037465.1 1028 1176 +
Chr2	stalkie_big_nohaplotig	CDS	95447152	95447176	.	+	0	Parent=FBgn0037465.1.mrna1;Target=FBgn0037465.1 3 28 +
Chr2	stalkie_big_nohaplotig	CDS	95448130	95448154	.	+	2	Parent=FBgn0037465.1.mrna1;Target=FBgn0037465.1 29 53 +
Chr2	gffcl	locus	95452608	95457021	.	-	.	ID=RLOC_00019640;geneIDs=FBgn0022359.1.path1,comp96969_c1_seq1.path2;transcripts=FBgn0022359.1.mrna1,comp96969_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	95452608	95457021	.	-	.	ID=FBgn0022359.1.mrna1;geneID=FBgn0022359.1.path1;Name=FBgn0022359.1;Dir=sensecoverage=100.0;identity=99.7;matches=1128;mismatches=3;indels=0;unknowns=0;locus=RLOC_00019640
Chr2	stalkie_big_nohaplotig	exon	95452608	95452779	100	-	.	Parent=FBgn0022359.1.mrna1;Target=FBgn0022359.1 960 1131 +
Chr2	stalkie_big_nohaplotig	exon	95452837	95452958	100	-	.	Parent=FBgn0022359.1.mrna1;Target=FBgn0022359.1 838 959 +
Chr2	stalkie_big_nohaplotig	exon	95453019	95453707	99	-	.	Parent=FBgn0022359.1.mrna1;Target=FBgn0022359.1 149 837 +
Chr2	stalkie_big_nohaplotig	exon	95453774	95453807	100	-	.	Parent=FBgn0022359.1.mrna1;Target=FBgn0022359.1 115 148 +
Chr2	stalkie_big_nohaplotig	exon	95456808	95456878	98	-	.	Parent=FBgn0022359.1.mrna1;Target=FBgn0022359.1 44 114 +
Chr2	stalkie_big_nohaplotig	exon	95456979	95457021	97	-	.	Parent=FBgn0022359.1.mrna1;Target=FBgn0022359.1 1 43 +
Chr2	stalkie_big_nohaplotig	CDS	95452608	95452779	.	-	1	Parent=FBgn0022359.1.mrna1;Target=FBgn0022359.1 960 1131 +
Chr2	stalkie_big_nohaplotig	CDS	95452837	95452958	.	-	0	Parent=FBgn0022359.1.mrna1;Target=FBgn0022359.1 838 959 +
Chr2	stalkie_big_nohaplotig	CDS	95453019	95453707	.	-	2	Parent=FBgn0022359.1.mrna1;Target=FBgn0022359.1 149 837 +
Chr2	stalkie_big_nohaplotig	CDS	95453774	95453807	.	-	0	Parent=FBgn0022359.1.mrna1;Target=FBgn0022359.1 115 148 +
Chr2	stalkie_big_nohaplotig	CDS	95456808	95456878	.	-	2	Parent=FBgn0022359.1.mrna1;Target=FBgn0022359.1 44 114 +
Chr2	stalkie_big_nohaplotig	CDS	95456979	95457021	.	-	0	Parent=FBgn0022359.1.mrna1;Target=FBgn0022359.1 1 43 +
Chr2	stalkie_big_nohaplotig	mRNA	95453786	95454166	.	-	.	ID=comp96969_c1_seq1.mrna2;geneID=comp96969_c1_seq1.path2;Name=comp96969_c1_seq1;Dir=indeterminatecoverage=69.8;identity=96.1;matches=368;mismatches=13;indels=2;unknowns=0;Target=comp96969_c1_seq1 549 167 .;CDS_Target=comp96969_c1_seq1 249 175 .;locus=RLOC_00019640
Chr2	stalkie_big_nohaplotig	exon	95453786	95454166	96	-	.	Parent=comp96969_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	95454086	95454158	.	-	0	Parent=comp96969_c1_seq1.mrna2
Chr2	gffcl	locus	95460313	95462924	.	-	.	ID=RLOC_00019641;geneIDs=FBgn0037849.1.path1;transcripts=FBgn0037849.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95460313	95462924	.	-	.	ID=FBgn0037849.1.mrna1;geneID=FBgn0037849.1.path1;Name=FBgn0037849.1;Dir=sensecoverage=100.0;identity=99.9;matches=1415;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019641
Chr2	stalkie_big_nohaplotig	exon	95460313	95460887	100	-	.	Parent=FBgn0037849.1.mrna1;Target=FBgn0037849.1 842 1416 +
Chr2	stalkie_big_nohaplotig	exon	95460956	95461493	99	-	.	Parent=FBgn0037849.1.mrna1;Target=FBgn0037849.1 304 841 +
Chr2	stalkie_big_nohaplotig	exon	95462622	95462924	100	-	.	Parent=FBgn0037849.1.mrna1;Target=FBgn0037849.1 1 303 +
Chr2	stalkie_big_nohaplotig	CDS	95460313	95460887	.	-	2	Parent=FBgn0037849.1.mrna1;Target=FBgn0037849.1 842 1416 +
Chr2	stalkie_big_nohaplotig	CDS	95460956	95461493	.	-	0	Parent=FBgn0037849.1.mrna1;Target=FBgn0037849.1 304 841 +
Chr2	stalkie_big_nohaplotig	CDS	95462622	95462924	.	-	0	Parent=FBgn0037849.1.mrna1;Target=FBgn0037849.1 1 303 +
Chr2	gffcl	locus	95463732	95464568	.	+	.	ID=RLOC_00019642;geneIDs=comp148642_c0_seq1.path1;transcripts=comp148642_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95463732	95464568	.	+	.	ID=comp148642_c0_seq1.mrna1;geneID=comp148642_c0_seq1.path1;Name=comp148642_c0_seq1;Dir=antisensecoverage=99.9;identity=96.0;matches=750;mismatches=15;indels=16;unknowns=0;locus=RLOC_00019642
Chr2	stalkie_big_nohaplotig	exon	95463732	95464177	94	+	.	Parent=comp148642_c0_seq1.mrna1;Target=comp148642_c0_seq1 330 766 -
Chr2	stalkie_big_nohaplotig	exon	95464234	95464568	97	+	.	Parent=comp148642_c0_seq1.mrna1;Target=comp148642_c0_seq1 2 329 -
Chr2	stalkie_big_nohaplotig	CDS	95464046	95464177	.	+	0	Parent=comp148642_c0_seq1.mrna1;Target=comp148642_c0_seq1 330 461 .
Chr2	stalkie_big_nohaplotig	CDS	95464234	95464452	.	+	0	Parent=comp148642_c0_seq1.mrna1;Target=comp148642_c0_seq1 111 329 .
Chr2	gffcl	locus	95465128	95465813	.	-	.	ID=RLOC_00019643;geneIDs=FBgn0038389.1.path1;transcripts=FBgn0038389.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95465128	95465813	.	-	.	ID=FBgn0038389.1.mrna1;geneID=FBgn0038389.1.path1;Name=FBgn0038389.1;Dir=sensecoverage=99.8;identity=100.0;matches=626;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019643
Chr2	stalkie_big_nohaplotig	exon	95465128	95465623	100	-	.	Parent=FBgn0038389.1.mrna1;Target=FBgn0038389.1 132 627 +
Chr2	stalkie_big_nohaplotig	exon	95465684	95465813	100	-	.	Parent=FBgn0038389.1.mrna1;Target=FBgn0038389.1 2 131 +
Chr2	stalkie_big_nohaplotig	CDS	95465128	95465623	.	-	1	Parent=FBgn0038389.1.mrna1;Target=FBgn0038389.1 132 627 +
Chr2	stalkie_big_nohaplotig	CDS	95465684	95465811	.	-	0	Parent=FBgn0038389.1.mrna1;Target=FBgn0038389.1 4 131 +
Chr2	gffcl	locus	95468268	95475230	.	.	.	ID=RLOC_00019644;geneIDs=comp155965_c2_seq1.path2,comp155965_c2_seq1.path3;transcripts=comp155965_c2_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	95468268	95475219	.	+	.	ID=comp155965_c2_seq1.mrna3;geneID=comp155965_c2_seq1.path3;Name=comp155965_c2_seq1;Dir=indeterminatecoverage=48.8;identity=99.9;matches=734;mismatches=0;indels=1;unknowns=0;Target=comp155965_c2_seq1 1199 1101 .;locus=RLOC_00019644
Chr2	stalkie_big_nohaplotig	exon	95468268	95468271	100	+	.	Parent=comp155965_c2_seq1.mrna3;Target=comp155965_c2_seq1 775 772 .
Chr2	stalkie_big_nohaplotig	exon	95473260	95473264	100	+	.	Parent=comp155965_c2_seq1.mrna3;Target=comp155965_c2_seq1 780 776 .
Chr2	stalkie_big_nohaplotig	exon	95474494	95475219	99	+	.	Parent=comp155965_c2_seq1.mrna3;Target=comp155965_c2_seq1 1505 781 .
Chr2	stalkie_big_nohaplotig	CDS	95474814	95474913	.	+	0	Parent=comp155965_c2_seq1.mrna3
Chr2	gffcl	locus	95468601	95469696	.	+	.	ID=RLOC_00019645;geneIDs=FBgn0038388.1.path1;transcripts=FBgn0038388.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95468601	95469696	.	+	.	ID=FBgn0038388.1.mrna1;geneID=FBgn0038388.1.path1;Name=FBgn0038388.1;Dir=sensecoverage=100.0;identity=99.9;matches=1037;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019645
Chr2	stalkie_big_nohaplotig	exon	95468601	95468616	100	+	.	Parent=FBgn0038388.1.mrna1;Target=FBgn0038388.1 1 16 +
Chr2	stalkie_big_nohaplotig	exon	95468675	95469696	99	+	.	Parent=FBgn0038388.1.mrna1;Target=FBgn0038388.1 17 1038 +
Chr2	stalkie_big_nohaplotig	CDS	95468601	95468616	.	+	0	Parent=FBgn0038388.1.mrna1;Target=FBgn0038388.1 1 16 +
Chr2	stalkie_big_nohaplotig	CDS	95468675	95469696	.	+	2	Parent=FBgn0038388.1.mrna1;Target=FBgn0038388.1 17 1038 +
Chr2	gffcl	locus	95475603	95476194	.	.	.	ID=RLOC_00019646;geneIDs=comp69325_c0_seq1.path1,comp93393_c0_seq1.path1;transcripts=comp69325_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95475603	95475953	.	-	.	ID=comp69325_c0_seq1.mrna1;geneID=comp69325_c0_seq1.path1;Name=comp69325_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.4;matches=349;mismatches=2;indels=0;unknowns=0;Target=comp69325_c0_seq1 354 4 .;CDS_Target=comp69325_c0_seq1 82 5 .;locus=RLOC_00019646
Chr2	stalkie_big_nohaplotig	exon	95475603	95475953	99	-	.	Parent=comp69325_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95475875	95475952	.	-	0	Parent=comp69325_c0_seq1.mrna1
Chr2	gffcl	locus	95477863	95478124	.	+	.	ID=RLOC_00019647;geneIDs=comp79575_c0_seq1.path1;transcripts=comp79575_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95477863	95478124	.	+	.	ID=comp79575_c0_seq1.mrna1;geneID=comp79575_c0_seq1.path1;Name=comp79575_c0_seq1;Dir=indeterminatecoverage=91.0;identity=99.2;matches=261;mismatches=1;indels=1;unknowns=0;Target=comp79575_c0_seq1 276 14 .;CDS_Target=comp79575_c0_seq1 130 14 .;locus=RLOC_00019647
Chr2	stalkie_big_nohaplotig	exon	95477863	95478124	99	+	.	Parent=comp79575_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95477863	95477979	.	+	0	Parent=comp79575_c0_seq1.mrna1
Chr2	gffcl	locus	95480079	95481064	.	-	.	ID=RLOC_00019648;geneIDs=comp162746_c0_seq1.path3;transcripts=comp162746_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	95480079	95481064	.	-	.	ID=comp162746_c0_seq1.mrna3;geneID=comp162746_c0_seq1.path3;Name=comp162746_c0_seq1;Dir=indeterminatecoverage=90.9;identity=99.2;matches=979;mismatches=7;indels=1;unknowns=0;Target=comp162746_c0_seq1 1086 100 .;CDS_Target=comp162746_c0_seq1 961 521 .;locus=RLOC_00019648
Chr2	stalkie_big_nohaplotig	exon	95480079	95481064	99	-	.	Parent=comp162746_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	CDS	95480203	95480643	.	-	0	Parent=comp162746_c0_seq1.mrna3
Chr2	gffcl	locus	95509885	95510475	.	+	.	ID=RLOC_00019649;geneIDs=comp160431_c0_seq1.path7;transcripts=comp160431_c0_seq1.mrna7
Chr2	stalkie_big_nohaplotig	mRNA	95509885	95510475	.	+	.	ID=comp160431_c0_seq1.mrna7;geneID=comp160431_c0_seq1.path7;Name=comp160431_c0_seq1;Dir=indeterminatecoverage=98.5;identity=97.7;matches=585;mismatches=6;indels=8;unknowns=0;Target=comp160431_c0_seq1 599 1 .;CDS_Target=comp160431_c0_seq1 528 1 .;locus=RLOC_00019649
Chr2	stalkie_big_nohaplotig	exon	95509885	95510475	97	+	.	Parent=comp160431_c0_seq1.mrna7
Chr2	stalkie_big_nohaplotig	CDS	95509885	95510412	.	+	0	Parent=comp160431_c0_seq1.mrna7
Chr2	gffcl	locus	95578642	95579379	.	-	.	ID=RLOC_00019650;geneIDs=comp155965_c2_seq1.path1;transcripts=comp155965_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95578642	95579379	.	-	.	ID=comp155965_c2_seq1.mrna1;geneID=comp155965_c2_seq1.path1;Name=comp155965_c2_seq1;Dir=indeterminatecoverage=49.0;identity=100.0;matches=738;mismatches=0;indels=0;unknowns=0;Target=comp155965_c2_seq1 748 11 .;CDS_Target=comp155965_c2_seq1 293 189 .;locus=RLOC_00019650
Chr2	stalkie_big_nohaplotig	exon	95578642	95579379	100	-	.	Parent=comp155965_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95579097	95579201	.	-	0	Parent=comp155965_c2_seq1.mrna1
Chr2	gffcl	locus	95580078	95580538	.	+	.	ID=RLOC_00019651;geneIDs=comp93393_c0_seq1.path2,comp646943_c0_seq1.path1;transcripts=comp93393_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	95580078	95580341	.	+	.	ID=comp93393_c0_seq1.mrna2;geneID=comp93393_c0_seq1.path2;Name=comp93393_c0_seq1;Dir=indeterminatecoverage=95.7;identity=100.0;matches=264;mismatches=0;indels=0;unknowns=0;Target=comp93393_c0_seq1 264 1 .;CDS_Target=comp93393_c0_seq1 73 2 .;locus=RLOC_00019651
Chr2	stalkie_big_nohaplotig	exon	95580078	95580341	100	+	.	Parent=comp93393_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	95580079	95580150	.	+	0	Parent=comp93393_c0_seq1.mrna2
Chr2	gffcl	locus	95582076	95582337	.	+	.	ID=RLOC_00019652;geneIDs=comp79575_c0_seq1.path2;transcripts=comp79575_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	95582076	95582337	.	+	.	ID=comp79575_c0_seq1.mrna2;geneID=comp79575_c0_seq1.path2;Name=comp79575_c0_seq1;Dir=indeterminatecoverage=91.0;identity=99.2;matches=261;mismatches=1;indels=1;unknowns=0;Target=comp79575_c0_seq1 276 14 .;CDS_Target=comp79575_c0_seq1 130 14 .;locus=RLOC_00019652
Chr2	stalkie_big_nohaplotig	exon	95582076	95582337	99	+	.	Parent=comp79575_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	95582076	95582192	.	+	0	Parent=comp79575_c0_seq1.mrna2
Chr2	gffcl	locus	95582980	95583882	.	-	.	ID=RLOC_00019653;geneIDs=comp115304_c0_seq1.path1;transcripts=comp115304_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95582980	95583882	.	-	.	ID=comp115304_c0_seq1.mrna1;geneID=comp115304_c0_seq1.path1;Name=comp115304_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=459;mismatches=0;indels=0;unknowns=0;Target=comp115304_c0_seq1 29 160 .;locus=RLOC_00019653
Chr2	stalkie_big_nohaplotig	exon	95582980	95583414	100	-	.	Parent=comp115304_c0_seq1.mrna1;Target=comp115304_c0_seq1 1 435 -
Chr2	stalkie_big_nohaplotig	exon	95583859	95583882	100	-	.	Parent=comp115304_c0_seq1.mrna1;Target=comp115304_c0_seq1 436 459 -
Chr2	stalkie_big_nohaplotig	CDS	95583008	95583139	.	-	0	Parent=comp115304_c0_seq1.mrna1
Chr2	gffcl	locus	95584322	96663799	.	-	.	ID=RLOC_00019654;geneIDs=comp133855_c0_seq1.path1;transcripts=comp133855_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95584322	96663799	.	-	.	ID=comp133855_c0_seq1.mrna1;geneID=comp133855_c0_seq1.path1;Name=comp133855_c0_seq1;Dir=indeterminatecoverage=67.3;identity=99.4;matches=506;mismatches=1;indels=2;unknowns=0;Target=comp133855_c0_seq1 437 372 .;locus=RLOC_00019654
Chr2	stalkie_big_nohaplotig	exon	95584322	95584331	100	-	.	Parent=comp133855_c0_seq1.mrna1;Target=comp133855_c0_seq1 527 518 .
Chr2	stalkie_big_nohaplotig	exon	96663303	96663799	99	-	.	Parent=comp133855_c0_seq1.mrna1;Target=comp133855_c0_seq1 517 19 .
Chr2	stalkie_big_nohaplotig	CDS	96663381	96663446	.	-	0	Parent=comp133855_c0_seq1.mrna1
Chr2	gffcl	locus	95587944	95588213	.	-	.	ID=RLOC_00019655;geneIDs=comp136722_c0_seq1.path1;transcripts=comp136722_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95587944	95588213	.	-	.	ID=comp136722_c0_seq1.mrna1;geneID=comp136722_c0_seq1.path1;Name=comp136722_c0_seq1;Dir=indeterminatecoverage=98.2;identity=100.0;matches=270;mismatches=0;indels=0;unknowns=0;Target=comp136722_c0_seq1 275 6 .;CDS_Target=comp136722_c0_seq1 260 171 .;locus=RLOC_00019655
Chr2	stalkie_big_nohaplotig	exon	95587944	95588213	100	-	.	Parent=comp136722_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95587959	95588048	.	-	0	Parent=comp136722_c0_seq1.mrna1
Chr2	gffcl	locus	95591270	95591567	.	-	.	ID=RLOC_00019656;geneIDs=comp144075_c0_seq1.path1;transcripts=comp144075_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95591270	95591567	.	-	.	ID=comp144075_c0_seq1.mrna1;geneID=comp144075_c0_seq1.path1;Name=comp144075_c0_seq1;Dir=indeterminatecoverage=91.4;identity=99.3;matches=296;mismatches=2;indels=0;unknowns=0;Target=comp144075_c0_seq1 326 29 .;CDS_Target=comp144075_c0_seq1 162 97 .;locus=RLOC_00019656
Chr2	stalkie_big_nohaplotig	exon	95591270	95591567	99	-	.	Parent=comp144075_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95591434	95591499	.	-	0	Parent=comp144075_c0_seq1.mrna1
Chr2	gffcl	locus	95591686	95592853	.	-	.	ID=RLOC_00019657;geneIDs=comp153731_c0_seq1.path1;transcripts=comp153731_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95591686	95592853	.	-	.	ID=comp153731_c0_seq1.mrna1;geneID=comp153731_c0_seq1.path1;Name=comp153731_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.5;matches=1163;mismatches=5;indels=37;unknowns=0;Target=comp153731_c0_seq1 1205 1 .;CDS_Target=comp153731_c0_seq1 61 2 .;locus=RLOC_00019657
Chr2	stalkie_big_nohaplotig	exon	95591686	95592853	96	-	.	Parent=comp153731_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95592793	95592852	.	-	0	Parent=comp153731_c0_seq1.mrna1
Chr2	gffcl	locus	95593083	95593299	.	-	.	ID=RLOC_00019658;geneIDs=comp106321_c0_seq1.path1;transcripts=comp106321_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95593083	95593299	.	-	.	ID=comp106321_c0_seq1.mrna1;geneID=comp106321_c0_seq1.path1;Name=comp106321_c0_seq1;Dir=indeterminatecoverage=89.2;identity=88.1;matches=200;mismatches=5;indels=22;unknowns=0;Target=comp106321_c0_seq1 241 27 .;CDS_Target=comp106321_c0_seq1 49 29 .;locus=RLOC_00019658
Chr2	stalkie_big_nohaplotig	exon	95593083	95593299	88	-	.	Parent=comp106321_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95593277	95593297	.	-	0	Parent=comp106321_c0_seq1.mrna1
Chr2	gffcl	locus	95598252	95686505	.	-	.	ID=RLOC_00019659;geneIDs=FBgn0013334.1.path1;transcripts=FBgn0013334.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95598252	95686505	.	-	.	ID=FBgn0013334.1.mrna1;geneID=FBgn0013334.1.path1;Name=FBgn0013334.1;Dir=sensecoverage=100.0;identity=99.8;matches=1287;mismatches=2;indels=1;unknowns=0;locus=RLOC_00019659
Chr2	stalkie_big_nohaplotig	exon	95598252	95598444	98	-	.	Parent=FBgn0013334.1.mrna1;Target=FBgn0013334.1 1097 1290 +
Chr2	stalkie_big_nohaplotig	exon	95601914	95602032	100	-	.	Parent=FBgn0013334.1.mrna1;Target=FBgn0013334.1 978 1096 +
Chr2	stalkie_big_nohaplotig	exon	95602117	95602391	100	-	.	Parent=FBgn0013334.1.mrna1;Target=FBgn0013334.1 703 977 +
Chr2	stalkie_big_nohaplotig	exon	95602461	95602561	100	-	.	Parent=FBgn0013334.1.mrna1;Target=FBgn0013334.1 602 702 +
Chr2	stalkie_big_nohaplotig	exon	95602844	95602920	100	-	.	Parent=FBgn0013334.1.mrna1;Target=FBgn0013334.1 525 601 +
Chr2	stalkie_big_nohaplotig	exon	95606490	95606729	100	-	.	Parent=FBgn0013334.1.mrna1;Target=FBgn0013334.1 285 524 +
Chr2	stalkie_big_nohaplotig	exon	95624641	95624679	100	-	.	Parent=FBgn0013334.1.mrna1;Target=FBgn0013334.1 246 284 +
Chr2	stalkie_big_nohaplotig	exon	95686261	95686505	99	-	.	Parent=FBgn0013334.1.mrna1;Target=FBgn0013334.1 1 245 +
Chr2	stalkie_big_nohaplotig	CDS	95598252	95598444	.	-	2	Parent=FBgn0013334.1.mrna1;Target=FBgn0013334.1 1097 1290 +
Chr2	stalkie_big_nohaplotig	CDS	95601914	95602032	.	-	1	Parent=FBgn0013334.1.mrna1;Target=FBgn0013334.1 978 1096 +
Chr2	stalkie_big_nohaplotig	CDS	95602117	95602391	.	-	0	Parent=FBgn0013334.1.mrna1;Target=FBgn0013334.1 703 977 +
Chr2	stalkie_big_nohaplotig	CDS	95602461	95602561	.	-	2	Parent=FBgn0013334.1.mrna1;Target=FBgn0013334.1 602 702 +
Chr2	stalkie_big_nohaplotig	CDS	95602844	95602920	.	-	1	Parent=FBgn0013334.1.mrna1;Target=FBgn0013334.1 525 601 +
Chr2	stalkie_big_nohaplotig	CDS	95606490	95606729	.	-	1	Parent=FBgn0013334.1.mrna1;Target=FBgn0013334.1 285 524 +
Chr2	stalkie_big_nohaplotig	CDS	95624641	95624679	.	-	1	Parent=FBgn0013334.1.mrna1;Target=FBgn0013334.1 246 284 +
Chr2	stalkie_big_nohaplotig	CDS	95686261	95686505	.	-	0	Parent=FBgn0013334.1.mrna1;Target=FBgn0013334.1 1 245 +
Chr2	gffcl	locus	95642931	95643951	.	-	.	ID=RLOC_00019660;geneIDs=comp160259_c0_seq1.path1;transcripts=comp160259_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95642931	95643951	.	-	.	ID=comp160259_c0_seq1.mrna1;geneID=comp160259_c0_seq1.path1;Name=comp160259_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=993;mismatches=14;indels=14;unknowns=0;Target=comp160259_c0_seq1 1007 1 .;CDS_Target=comp160259_c0_seq1 929 837 .;locus=RLOC_00019660
Chr2	stalkie_big_nohaplotig	exon	95642931	95643951	97	-	.	Parent=comp160259_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95643009	95643101	.	-	0	Parent=comp160259_c0_seq1.mrna1
Chr2	gffcl	locus	95661748	95663640	.	-	.	ID=RLOC_00019661;geneIDs=comp152772_c0_seq1.path1;transcripts=comp152772_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95661748	95663640	.	-	.	ID=comp152772_c0_seq1.mrna1;geneID=comp152772_c0_seq1.path1;Name=comp152772_c0_seq1;Dir=antisensecoverage=99.9;identity=99.6;matches=1830;mismatches=6;indels=1;unknowns=0;Target=comp152772_c0_seq1 1220 1699 .;locus=RLOC_00019661
Chr2	stalkie_big_nohaplotig	exon	95661748	95662959	99	-	.	Parent=comp152772_c0_seq1.mrna1;Target=comp152772_c0_seq1 2 1212 -
Chr2	stalkie_big_nohaplotig	exon	95663016	95663640	99	-	.	Parent=comp152772_c0_seq1.mrna1;Target=comp152772_c0_seq1 1213 1837 -
Chr2	stalkie_big_nohaplotig	CDS	95663023	95663502	.	-	0	Parent=comp152772_c0_seq1.mrna1
Chr2	gffcl	locus	95689362	95690114	.	+	.	ID=RLOC_00019662;geneIDs=comp156376_c0_seq1.path1;transcripts=comp156376_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95689362	95690114	.	+	.	ID=comp156376_c0_seq1.mrna1;geneID=comp156376_c0_seq1.path1;Name=comp156376_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=747;mismatches=6;indels=0;unknowns=0;Target=comp156376_c0_seq1 753 1 .;CDS_Target=comp156376_c0_seq1 309 220 .;locus=RLOC_00019662
Chr2	stalkie_big_nohaplotig	exon	95689362	95690114	99	+	.	Parent=comp156376_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95689581	95689670	.	+	0	Parent=comp156376_c0_seq1.mrna1
Chr2	gffcl	locus	95692270	95701268	.	+	.	ID=RLOC_00019664;geneIDs=comp146410_c0_seq1.path1;transcripts=comp146410_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95692270	95701268	.	+	.	ID=comp146410_c0_seq1.mrna1;geneID=comp146410_c0_seq1.path1;Name=comp146410_c0_seq1;Dir=antisensecoverage=100.0;identity=98.7;matches=1006;mismatches=13;indels=0;unknowns=0;Target=comp146410_c0_seq1 195 269 .;locus=RLOC_00019664
Chr2	stalkie_big_nohaplotig	exon	95692270	95692475	99	+	.	Parent=comp146410_c0_seq1.mrna1;Target=comp146410_c0_seq1 814 1019 -
Chr2	stalkie_big_nohaplotig	exon	95700456	95701268	98	+	.	Parent=comp146410_c0_seq1.mrna1;Target=comp146410_c0_seq1 1 813 -
Chr2	stalkie_big_nohaplotig	CDS	95701000	95701074	.	+	0	Parent=comp146410_c0_seq1.mrna1
Chr2	gffcl	locus	95695052	95697690	.	-	.	ID=RLOC_00019665;geneIDs=FBgn0038385.1.path1;transcripts=FBgn0038385.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95695052	95697690	.	-	.	ID=FBgn0038385.1.mrna1;geneID=FBgn0038385.1.path1;Name=FBgn0038385.1;Dir=sensecoverage=100.0;identity=99.8;matches=2441;mismatches=4;indels=0;unknowns=0;locus=RLOC_00019665
Chr2	stalkie_big_nohaplotig	exon	95695052	95695584	99	-	.	Parent=FBgn0038385.1.mrna1;Target=FBgn0038385.1 1913 2445 +
Chr2	stalkie_big_nohaplotig	exon	95695650	95695829	100	-	.	Parent=FBgn0038385.1.mrna1;Target=FBgn0038385.1 1733 1912 +
Chr2	stalkie_big_nohaplotig	exon	95695902	95696732	99	-	.	Parent=FBgn0038385.1.mrna1;Target=FBgn0038385.1 902 1732 +
Chr2	stalkie_big_nohaplotig	exon	95696790	95697690	99	-	.	Parent=FBgn0038385.1.mrna1;Target=FBgn0038385.1 1 901 +
Chr2	stalkie_big_nohaplotig	CDS	95695052	95695584	.	-	2	Parent=FBgn0038385.1.mrna1;Target=FBgn0038385.1 1913 2445 +
Chr2	stalkie_big_nohaplotig	CDS	95695650	95695829	.	-	2	Parent=FBgn0038385.1.mrna1;Target=FBgn0038385.1 1733 1912 +
Chr2	stalkie_big_nohaplotig	CDS	95695902	95696732	.	-	2	Parent=FBgn0038385.1.mrna1;Target=FBgn0038385.1 902 1732 +
Chr2	stalkie_big_nohaplotig	CDS	95696790	95697690	.	-	0	Parent=FBgn0038385.1.mrna1;Target=FBgn0038385.1 1 901 +
Chr2	gffcl	locus	95707943	95710591	.	+	.	ID=RLOC_00019666;geneIDs=ORF178.path1;transcripts=ORF178.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95707943	95710591	.	+	.	ID=ORF178.mrna1;geneID=ORF178.path1;Name=ORF178;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2649;mismatches=0;indels=0;unknowns=0;Target=ORF178 2649 1 .;locus=RLOC_00019666
Chr2	stalkie_big_nohaplotig	exon	95707943	95710591	100	+	.	Parent=ORF178.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95707943	95710591	.	+	0	Parent=ORF178.mrna1
Chr2	gffcl	locus	95719387	96407156	.	+	.	ID=RLOC_00019667;geneIDs=FBgn0038380.1.path1,FBgn0051150.1.path1,comp163851_c0_seq1.path1;transcripts=comp163851_c0_seq1.mrna1,FBgn0038380.1.mrna1,FBgn0051150.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95719387	96407156	.	+	.	ID=comp163851_c0_seq1.mrna1;geneID=comp163851_c0_seq1.path1;Name=comp163851_c0_seq1;Dir=sensecoverage=58.4;identity=79.1;matches=2563;mismatches=393;indels=283;unknowns=0;Target=comp163851_c0_seq1 5437 5718 +;locus=RLOC_00019667
Chr2	stalkie_big_nohaplotig	exon	95719387	95719393	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 876 882 +
Chr2	stalkie_big_nohaplotig	exon	95720973	95720984	91	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 883 894 +
Chr2	stalkie_big_nohaplotig	exon	95721177	95721186	80	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 895 904 +
Chr2	stalkie_big_nohaplotig	exon	95724745	95724750	50	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 905 910 +
Chr2	stalkie_big_nohaplotig	exon	95727159	95727161	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 911 913 +
Chr2	stalkie_big_nohaplotig	exon	95729682	95729693	91	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 914 925 +
Chr2	stalkie_big_nohaplotig	exon	95752258	95752266	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 980 988 +
Chr2	stalkie_big_nohaplotig	exon	95766194	95766195	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1018 1019 +
Chr2	stalkie_big_nohaplotig	exon	95771645	95771653	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1020 1028 +
Chr2	stalkie_big_nohaplotig	exon	95775901	95775924	75	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1029 1050 +
Chr2	stalkie_big_nohaplotig	exon	95824013	95824021	88	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1092 1100 +
Chr2	stalkie_big_nohaplotig	exon	95853171	95853185	86	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1126 1140 +
Chr2	stalkie_big_nohaplotig	exon	95854507	95854517	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1141 1151 +
Chr2	stalkie_big_nohaplotig	exon	95857041	95857078	34	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1181 1226 +
Chr2	stalkie_big_nohaplotig	exon	95857090	95857097	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1277 1284 +
Chr2	stalkie_big_nohaplotig	exon	95857114	95857123	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1299 1308 +
Chr2	stalkie_big_nohaplotig	exon	95871525	95871541	82	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1309 1324 +
Chr2	stalkie_big_nohaplotig	exon	95881217	95881226	90	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1325 1334 +
Chr2	stalkie_big_nohaplotig	exon	95886561	95886614	58	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1335 1389 +
Chr2	stalkie_big_nohaplotig	exon	95896150	95896159	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1449 1458 +
Chr2	stalkie_big_nohaplotig	exon	95904414	95904424	90	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1583 1593 +
Chr2	stalkie_big_nohaplotig	exon	95915690	95915697	87	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1594 1601 +
Chr2	stalkie_big_nohaplotig	exon	95923340	95923348	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1602 1610 +
Chr2	stalkie_big_nohaplotig	exon	95929655	95929662	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1611 1618 +
Chr2	stalkie_big_nohaplotig	exon	95943980	95943989	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1619 1628 +
Chr2	stalkie_big_nohaplotig	exon	95945240	95945247	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1629 1636 +
Chr2	stalkie_big_nohaplotig	exon	95945889	95945893	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1637 1641 +
Chr2	stalkie_big_nohaplotig	exon	95965289	95965309	90	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1642 1662 +
Chr2	stalkie_big_nohaplotig	exon	95976553	95976567	77	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1663 1680 +
Chr2	stalkie_big_nohaplotig	exon	95983669	95983673	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1694 1698 +
Chr2	stalkie_big_nohaplotig	exon	95983741	95983748	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1699 1706 +
Chr2	stalkie_big_nohaplotig	exon	95983787	95983796	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1754 1763 +
Chr2	stalkie_big_nohaplotig	exon	96019928	96019933	83	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1849 1854 +
Chr2	stalkie_big_nohaplotig	exon	96022172	96022173	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1855 1856 +
Chr2	stalkie_big_nohaplotig	exon	96032088	96032091	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1857 1860 +
Chr2	stalkie_big_nohaplotig	exon	96033530	96033540	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1861 1871 +
Chr2	stalkie_big_nohaplotig	exon	96042030	96042094	42	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1874 1940 +
Chr2	stalkie_big_nohaplotig	exon	96044820	96044828	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 1948 1956 +
Chr2	stalkie_big_nohaplotig	exon	96047724	96047729	50	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2046 2050 +
Chr2	stalkie_big_nohaplotig	exon	96057092	96057096	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2051 2055 +
Chr2	stalkie_big_nohaplotig	exon	96058483	96058495	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2104 2116 +
Chr2	stalkie_big_nohaplotig	exon	96075147	96075176	48	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2119 2163 +
Chr2	stalkie_big_nohaplotig	exon	96079698	96079706	88	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2164 2172 +
Chr2	stalkie_big_nohaplotig	exon	96095552	96095558	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2228 2234 +
Chr2	stalkie_big_nohaplotig	exon	96099481	96099495	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2235 2249 +
Chr2	stalkie_big_nohaplotig	exon	96113003	96113007	80	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2274 2278 +
Chr2	stalkie_big_nohaplotig	exon	96135097	96135104	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2279 2286 +
Chr2	stalkie_big_nohaplotig	exon	96181786	96181794	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2314 2322 +
Chr2	stalkie_big_nohaplotig	exon	96187241	96187248	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2403 2410 +
Chr2	stalkie_big_nohaplotig	exon	96204658	96204660	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2412 2414 +
Chr2	stalkie_big_nohaplotig	exon	96212075	96212079	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2415 2419 +
Chr2	stalkie_big_nohaplotig	exon	96244743	96244748	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2420 2425 +
Chr2	stalkie_big_nohaplotig	exon	96249585	96249589	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2426 2430 +
Chr2	stalkie_big_nohaplotig	exon	96255691	96255694	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2431 2434 +
Chr2	stalkie_big_nohaplotig	exon	96261436	96261440	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2435 2439 +
Chr2	stalkie_big_nohaplotig	exon	96263946	96263958	92	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2440 2452 +
Chr2	stalkie_big_nohaplotig	exon	96317168	96317182	80	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2533 2547 +
Chr2	stalkie_big_nohaplotig	exon	96319570	96319624	38	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2548 2568 +
Chr2	stalkie_big_nohaplotig	exon	96319753	96319834	35	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2569 2600 +
Chr2	stalkie_big_nohaplotig	exon	96324288	96324293	83	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2601 2606 +
Chr2	stalkie_big_nohaplotig	exon	96330977	96330985	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2670 2678 +
Chr2	stalkie_big_nohaplotig	exon	96334957	96334959	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2770 2772 +
Chr2	stalkie_big_nohaplotig	exon	96344734	96344750	82	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2773 2789 +
Chr2	stalkie_big_nohaplotig	exon	96347713	96347789	55	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2790 2870 +
Chr2	stalkie_big_nohaplotig	exon	96348386	96348401	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2897 2912 +
Chr2	stalkie_big_nohaplotig	exon	96356739	96356742	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2913 2916 +
Chr2	stalkie_big_nohaplotig	exon	96356806	96356809	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2917 2920 +
Chr2	stalkie_big_nohaplotig	exon	96357003	96357023	70	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2921 2944 +
Chr2	stalkie_big_nohaplotig	exon	96366093	96366103	90	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2945 2955 +
Chr2	stalkie_big_nohaplotig	exon	96371740	96371743	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 2956 2959 +
Chr2	stalkie_big_nohaplotig	exon	96382831	96382840	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 3034 3043 +
Chr2	stalkie_big_nohaplotig	exon	96390325	96390329	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 3158 3162 +
Chr2	stalkie_big_nohaplotig	exon	96390356	96390358	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 3220 3222 +
Chr2	stalkie_big_nohaplotig	exon	96394642	96394650	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 3223 3231 +
Chr2	stalkie_big_nohaplotig	exon	96394662	96394843	48	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 3279 3455 +
Chr2	stalkie_big_nohaplotig	exon	96396035	96396296	51	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 3483 3769 +
Chr2	stalkie_big_nohaplotig	exon	96396344	96396383	47	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 3943 3975 +
Chr2	stalkie_big_nohaplotig	exon	96396709	96396717	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 4090 4098 +
Chr2	stalkie_big_nohaplotig	exon	96397059	96397078	28	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 4442 4512 +
Chr2	stalkie_big_nohaplotig	exon	96398042	96398086	64	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 4549 4590 +
Chr2	stalkie_big_nohaplotig	exon	96398289	96398300	75	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 4591 4602 +
Chr2	stalkie_big_nohaplotig	exon	96398543	96398552	100	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 4603 4612 +
Chr2	stalkie_big_nohaplotig	exon	96400454	96400464	72	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 4613 4623 +
Chr2	stalkie_big_nohaplotig	exon	96400993	96401020	43	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 4624 4664 +
Chr2	stalkie_big_nohaplotig	exon	96405709	96407156	98	+	.	Parent=comp163851_c0_seq1.mrna1;Target=comp163851_c0_seq1 4665 6113 +
Chr2	stalkie_big_nohaplotig	CDS	96406481	96406762	.	+	0	Parent=comp163851_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95871163	95872233	.	+	.	ID=FBgn0038380.1.mrna1;geneID=FBgn0038380.1.path1;Name=FBgn0038380.1;Dir=sensecoverage=100.0;identity=99.0;matches=924;mismatches=9;indels=0;unknowns=0;locus=RLOC_00019667
Chr2	stalkie_big_nohaplotig	exon	95871163	95871877	98	+	.	Parent=FBgn0038380.1.mrna1;Target=FBgn0038380.1 1 715 +
Chr2	stalkie_big_nohaplotig	exon	95871953	95872140	100	+	.	Parent=FBgn0038380.1.mrna1;Target=FBgn0038380.1 716 903 +
Chr2	stalkie_big_nohaplotig	exon	95872204	95872233	100	+	.	Parent=FBgn0038380.1.mrna1;Target=FBgn0038380.1 904 933 +
Chr2	stalkie_big_nohaplotig	CDS	95871163	95871877	.	+	0	Parent=FBgn0038380.1.mrna1;Target=FBgn0038380.1 1 715 +
Chr2	stalkie_big_nohaplotig	CDS	95871953	95872140	.	+	2	Parent=FBgn0038380.1.mrna1;Target=FBgn0038380.1 716 903 +
Chr2	stalkie_big_nohaplotig	CDS	95872204	95872233	.	+	0	Parent=FBgn0038380.1.mrna1;Target=FBgn0038380.1 904 933 +
Chr2	stalkie_big_nohaplotig	mRNA	96024258	96044924	.	+	.	ID=FBgn0051150.1.mrna1;geneID=FBgn0051150.1.path1;Name=FBgn0051150.1;Dir=sensecoverage=100.0;identity=100.0;matches=4362;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019667
Chr2	stalkie_big_nohaplotig	exon	96024258	96024312	100	+	.	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 1 55 +
Chr2	stalkie_big_nohaplotig	exon	96024798	96025000	100	+	.	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 56 258 +
Chr2	stalkie_big_nohaplotig	exon	96032879	96033106	100	+	.	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 259 486 +
Chr2	stalkie_big_nohaplotig	exon	96033179	96033489	100	+	.	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 487 797 +
Chr2	stalkie_big_nohaplotig	exon	96033561	96034087	100	+	.	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 798 1324 +
Chr2	stalkie_big_nohaplotig	exon	96034160	96034294	100	+	.	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 1325 1459 +
Chr2	stalkie_big_nohaplotig	exon	96035561	96035733	100	+	.	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 1460 1632 +
Chr2	stalkie_big_nohaplotig	exon	96035785	96036002	100	+	.	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 1633 1850 +
Chr2	stalkie_big_nohaplotig	exon	96036078	96036297	100	+	.	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 1851 2070 +
Chr2	stalkie_big_nohaplotig	exon	96036356	96036584	100	+	.	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 2071 2299 +
Chr2	stalkie_big_nohaplotig	exon	96036650	96037149	100	+	.	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 2300 2799 +
Chr2	stalkie_big_nohaplotig	exon	96037212	96037327	100	+	.	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 2800 2915 +
Chr2	stalkie_big_nohaplotig	exon	96037385	96037511	100	+	.	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 2916 3042 +
Chr2	stalkie_big_nohaplotig	exon	96037569	96037787	100	+	.	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 3043 3261 +
Chr2	stalkie_big_nohaplotig	exon	96043546	96043689	100	+	.	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 3262 3405 +
Chr2	stalkie_big_nohaplotig	exon	96043760	96043936	100	+	.	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 3406 3582 +
Chr2	stalkie_big_nohaplotig	exon	96043996	96044245	100	+	.	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 3583 3832 +
Chr2	stalkie_big_nohaplotig	exon	96044323	96044677	100	+	.	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 3833 4187 +
Chr2	stalkie_big_nohaplotig	exon	96044750	96044924	100	+	.	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 4188 4362 +
Chr2	stalkie_big_nohaplotig	CDS	96024258	96024312	.	+	0	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 1 55 +
Chr2	stalkie_big_nohaplotig	CDS	96024798	96025000	.	+	2	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 56 258 +
Chr2	stalkie_big_nohaplotig	CDS	96032879	96033106	.	+	0	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 259 486 +
Chr2	stalkie_big_nohaplotig	CDS	96033179	96033489	.	+	0	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 487 797 +
Chr2	stalkie_big_nohaplotig	CDS	96033561	96034087	.	+	1	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 798 1324 +
Chr2	stalkie_big_nohaplotig	CDS	96034160	96034294	.	+	2	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 1325 1459 +
Chr2	stalkie_big_nohaplotig	CDS	96035561	96035733	.	+	2	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 1460 1632 +
Chr2	stalkie_big_nohaplotig	CDS	96035785	96036002	.	+	0	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 1633 1850 +
Chr2	stalkie_big_nohaplotig	CDS	96036078	96036297	.	+	1	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 1851 2070 +
Chr2	stalkie_big_nohaplotig	CDS	96036356	96036584	.	+	0	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 2071 2299 +
Chr2	stalkie_big_nohaplotig	CDS	96036650	96037149	.	+	2	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 2300 2799 +
Chr2	stalkie_big_nohaplotig	CDS	96037212	96037327	.	+	0	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 2800 2915 +
Chr2	stalkie_big_nohaplotig	CDS	96037385	96037511	.	+	1	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 2916 3042 +
Chr2	stalkie_big_nohaplotig	CDS	96037569	96037787	.	+	0	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 3043 3261 +
Chr2	stalkie_big_nohaplotig	CDS	96043546	96043689	.	+	0	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 3262 3405 +
Chr2	stalkie_big_nohaplotig	CDS	96043760	96043936	.	+	0	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 3406 3582 +
Chr2	stalkie_big_nohaplotig	CDS	96043996	96044245	.	+	0	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 3583 3832 +
Chr2	stalkie_big_nohaplotig	CDS	96044323	96044677	.	+	2	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 3833 4187 +
Chr2	stalkie_big_nohaplotig	CDS	96044750	96044924	.	+	1	Parent=FBgn0051150.1.mrna1;Target=FBgn0051150.1 4188 4362 +
Chr2	gffcl	locus	95779093	95791124	.	+	.	ID=RLOC_00019668;geneIDs=FBgn0051291.1.path1,comp138045_c0_seq1.path1;transcripts=comp138045_c0_seq1.mrna1,FBgn0051291.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95779093	95791124	.	+	.	ID=comp138045_c0_seq1.mrna1;geneID=comp138045_c0_seq1.path1;Name=comp138045_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=2536;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019668
Chr2	stalkie_big_nohaplotig	exon	95779093	95779115	100	+	.	Parent=comp138045_c0_seq1.mrna1;Target=comp138045_c0_seq1 1 23 +
Chr2	stalkie_big_nohaplotig	exon	95779861	95781228	100	+	.	Parent=comp138045_c0_seq1.mrna1;Target=comp138045_c0_seq1 24 1391 +
Chr2	stalkie_big_nohaplotig	exon	95784140	95784224	100	+	.	Parent=comp138045_c0_seq1.mrna1;Target=comp138045_c0_seq1 1392 1476 +
Chr2	stalkie_big_nohaplotig	exon	95784879	95784996	100	+	.	Parent=comp138045_c0_seq1.mrna1;Target=comp138045_c0_seq1 1477 1594 +
Chr2	stalkie_big_nohaplotig	exon	95788786	95788978	100	+	.	Parent=comp138045_c0_seq1.mrna1;Target=comp138045_c0_seq1 1595 1787 +
Chr2	stalkie_big_nohaplotig	exon	95790376	95791124	100	+	.	Parent=comp138045_c0_seq1.mrna1;Target=comp138045_c0_seq1 1788 2536 +
Chr2	stalkie_big_nohaplotig	CDS	95779095	95779115	.	+	0	Parent=comp138045_c0_seq1.mrna1;Target=comp138045_c0_seq1 3 23 +
Chr2	stalkie_big_nohaplotig	CDS	95779861	95781228	.	+	0	Parent=comp138045_c0_seq1.mrna1;Target=comp138045_c0_seq1 24 1391 +
Chr2	stalkie_big_nohaplotig	CDS	95784140	95784224	.	+	0	Parent=comp138045_c0_seq1.mrna1;Target=comp138045_c0_seq1 1392 1476 +
Chr2	stalkie_big_nohaplotig	CDS	95784879	95784996	.	+	2	Parent=comp138045_c0_seq1.mrna1;Target=comp138045_c0_seq1 1477 1594 +
Chr2	stalkie_big_nohaplotig	CDS	95788786	95788978	.	+	1	Parent=comp138045_c0_seq1.mrna1;Target=comp138045_c0_seq1 1595 1787 +
Chr2	stalkie_big_nohaplotig	CDS	95790376	95791122	.	+	0	Parent=comp138045_c0_seq1.mrna1;Target=comp138045_c0_seq1 1788 2534 +
Chr2	stalkie_big_nohaplotig	mRNA	95779095	95791124	.	+	.	ID=FBgn0051291.1.mrna1;geneID=FBgn0051291.1.path1;Name=FBgn0051291.1;Dir=sensecoverage=100.0;identity=100.0;matches=2445;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019668
Chr2	stalkie_big_nohaplotig	exon	95779095	95779115	100	+	.	Parent=FBgn0051291.1.mrna1;Target=FBgn0051291.1 1 21 +
Chr2	stalkie_big_nohaplotig	exon	95779861	95781228	100	+	.	Parent=FBgn0051291.1.mrna1;Target=FBgn0051291.1 22 1389 +
Chr2	stalkie_big_nohaplotig	exon	95784140	95784224	100	+	.	Parent=FBgn0051291.1.mrna1;Target=FBgn0051291.1 1390 1474 +
Chr2	stalkie_big_nohaplotig	exon	95784879	95784996	100	+	.	Parent=FBgn0051291.1.mrna1;Target=FBgn0051291.1 1475 1592 +
Chr2	stalkie_big_nohaplotig	exon	95789114	95789217	100	+	.	Parent=FBgn0051291.1.mrna1;Target=FBgn0051291.1 1593 1696 +
Chr2	stalkie_big_nohaplotig	exon	95790376	95791124	100	+	.	Parent=FBgn0051291.1.mrna1;Target=FBgn0051291.1 1697 2445 +
Chr2	stalkie_big_nohaplotig	CDS	95779095	95779115	.	+	0	Parent=FBgn0051291.1.mrna1;Target=FBgn0051291.1 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	95779861	95781228	.	+	0	Parent=FBgn0051291.1.mrna1;Target=FBgn0051291.1 22 1389 +
Chr2	stalkie_big_nohaplotig	CDS	95784140	95784224	.	+	0	Parent=FBgn0051291.1.mrna1;Target=FBgn0051291.1 1390 1474 +
Chr2	stalkie_big_nohaplotig	CDS	95784879	95784996	.	+	2	Parent=FBgn0051291.1.mrna1;Target=FBgn0051291.1 1475 1592 +
Chr2	stalkie_big_nohaplotig	CDS	95789114	95789217	.	+	1	Parent=FBgn0051291.1.mrna1;Target=FBgn0051291.1 1593 1696 +
Chr2	stalkie_big_nohaplotig	CDS	95790376	95791124	.	+	2	Parent=FBgn0051291.1.mrna1;Target=FBgn0051291.1 1697 2445 +
Chr2	gffcl	locus	95795321	95798305	.	-	.	ID=RLOC_00019669;geneIDs=FBgn0038381.1.path1;transcripts=FBgn0038381.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95795321	95798305	.	-	.	ID=FBgn0038381.1.mrna1;geneID=FBgn0038381.1.path1;Name=FBgn0038381.1;Dir=sensecoverage=100.0;identity=100.0;matches=1050;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019669
Chr2	stalkie_big_nohaplotig	exon	95795321	95795575	100	-	.	Parent=FBgn0038381.1.mrna1;Target=FBgn0038381.1 796 1050 +
Chr2	stalkie_big_nohaplotig	exon	95797304	95797536	100	-	.	Parent=FBgn0038381.1.mrna1;Target=FBgn0038381.1 563 795 +
Chr2	stalkie_big_nohaplotig	exon	95797592	95797797	100	-	.	Parent=FBgn0038381.1.mrna1;Target=FBgn0038381.1 357 562 +
Chr2	stalkie_big_nohaplotig	exon	95797873	95798047	100	-	.	Parent=FBgn0038381.1.mrna1;Target=FBgn0038381.1 182 356 +
Chr2	stalkie_big_nohaplotig	exon	95798125	95798305	100	-	.	Parent=FBgn0038381.1.mrna1;Target=FBgn0038381.1 1 181 +
Chr2	stalkie_big_nohaplotig	CDS	95795321	95795575	.	-	0	Parent=FBgn0038381.1.mrna1;Target=FBgn0038381.1 796 1050 +
Chr2	stalkie_big_nohaplotig	CDS	95797304	95797536	.	-	2	Parent=FBgn0038381.1.mrna1;Target=FBgn0038381.1 563 795 +
Chr2	stalkie_big_nohaplotig	CDS	95797592	95797797	.	-	1	Parent=FBgn0038381.1.mrna1;Target=FBgn0038381.1 357 562 +
Chr2	stalkie_big_nohaplotig	CDS	95797873	95798047	.	-	2	Parent=FBgn0038381.1.mrna1;Target=FBgn0038381.1 182 356 +
Chr2	stalkie_big_nohaplotig	CDS	95798125	95798305	.	-	0	Parent=FBgn0038381.1.mrna1;Target=FBgn0038381.1 1 181 +
Chr2	gffcl	locus	95814414	95815269	.	+	.	ID=RLOC_00019670;geneIDs=comp154479_c0_seq1.path1;transcripts=comp154479_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95814414	95815269	.	+	.	ID=comp154479_c0_seq1.mrna1;geneID=comp154479_c0_seq1.path1;Name=comp154479_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.2;matches=849;mismatches=6;indels=10;unknowns=0;Target=comp154479_c0_seq1 865 2 .;CDS_Target=comp154479_c0_seq1 462 391 .;locus=RLOC_00019670
Chr2	stalkie_big_nohaplotig	exon	95814414	95815269	98	+	.	Parent=comp154479_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	95814803	95814874	.	+	0	Parent=comp154479_c0_seq1.mrna1
Chr2	gffcl	locus	95821341	95821877	.	-	.	ID=RLOC_00019671;geneIDs=comp145580_c5_seq1.path2;transcripts=comp145580_c5_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	95821341	95821877	.	-	.	ID=comp145580_c5_seq1.mrna2;geneID=comp145580_c5_seq1.path2;Name=comp145580_c5_seq1;Dir=indeterminatecoverage=85.8;identity=100.0;matches=537;mismatches=0;indels=0;unknowns=0;Target=comp145580_c5_seq1 626 90 .;CDS_Target=comp145580_c5_seq1 379 122 .;locus=RLOC_00019671
Chr2	stalkie_big_nohaplotig	exon	95821341	95821877	100	-	.	Parent=comp145580_c5_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	95821588	95821845	.	-	0	Parent=comp145580_c5_seq1.mrna2
Chr2	gffcl	locus	95822301	95822977	.	+	.	ID=RLOC_00019672;geneIDs=FBgn0027657.1.path1;transcripts=FBgn0027657.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95822301	95822977	.	+	.	ID=FBgn0027657.1.mrna1;geneID=FBgn0027657.1.path1;Name=FBgn0027657.1;Dir=sensecoverage=100.0;identity=100.0;matches=480;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019672
Chr2	stalkie_big_nohaplotig	exon	95822301	95822477	100	+	.	Parent=FBgn0027657.1.mrna1;Target=FBgn0027657.1 1 177 +
Chr2	stalkie_big_nohaplotig	exon	95822597	95822758	100	+	.	Parent=FBgn0027657.1.mrna1;Target=FBgn0027657.1 178 339 +
Chr2	stalkie_big_nohaplotig	exon	95822837	95822977	100	+	.	Parent=FBgn0027657.1.mrna1;Target=FBgn0027657.1 340 480 +
Chr2	stalkie_big_nohaplotig	CDS	95822301	95822477	.	+	0	Parent=FBgn0027657.1.mrna1;Target=FBgn0027657.1 1 177 +
Chr2	stalkie_big_nohaplotig	CDS	95822597	95822758	.	+	0	Parent=FBgn0027657.1.mrna1;Target=FBgn0027657.1 178 339 +
Chr2	stalkie_big_nohaplotig	CDS	95822837	95822977	.	+	0	Parent=FBgn0027657.1.mrna1;Target=FBgn0027657.1 340 480 +
Chr2	gffcl	locus	95969673	96008688	.	+	.	ID=RLOC_00019673;geneIDs=FBgn0051183.1.path1;transcripts=FBgn0051183.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95969673	96008688	.	+	.	ID=FBgn0051183.1.mrna1;geneID=FBgn0051183.1.path1;Name=FBgn0051183.1;Dir=sensecoverage=100.0;identity=99.9;matches=4410;mismatches=6;indels=0;unknowns=0;locus=RLOC_00019673
Chr2	stalkie_big_nohaplotig	exon	95969673	95970612	100	+	.	Parent=FBgn0051183.1.mrna1;Target=FBgn0051183.1 1 940 +
Chr2	stalkie_big_nohaplotig	exon	95986809	95986923	100	+	.	Parent=FBgn0051183.1.mrna1;Target=FBgn0051183.1 941 1055 +
Chr2	stalkie_big_nohaplotig	exon	95995729	95995873	100	+	.	Parent=FBgn0051183.1.mrna1;Target=FBgn0051183.1 1056 1200 +
Chr2	stalkie_big_nohaplotig	exon	95997765	95998191	99	+	.	Parent=FBgn0051183.1.mrna1;Target=FBgn0051183.1 1201 1627 +
Chr2	stalkie_big_nohaplotig	exon	95998269	95998991	99	+	.	Parent=FBgn0051183.1.mrna1;Target=FBgn0051183.1 1628 2350 +
Chr2	stalkie_big_nohaplotig	exon	96001397	96001561	100	+	.	Parent=FBgn0051183.1.mrna1;Target=FBgn0051183.1 2351 2515 +
Chr2	stalkie_big_nohaplotig	exon	96005531	96005708	100	+	.	Parent=FBgn0051183.1.mrna1;Target=FBgn0051183.1 2516 2693 +
Chr2	stalkie_big_nohaplotig	exon	96006966	96008688	100	+	.	Parent=FBgn0051183.1.mrna1;Target=FBgn0051183.1 2694 4416 +
Chr2	stalkie_big_nohaplotig	CDS	95969673	95970612	.	+	0	Parent=FBgn0051183.1.mrna1;Target=FBgn0051183.1 1 940 +
Chr2	stalkie_big_nohaplotig	CDS	95986809	95986923	.	+	2	Parent=FBgn0051183.1.mrna1;Target=FBgn0051183.1 941 1055 +
Chr2	stalkie_big_nohaplotig	CDS	95995729	95995873	.	+	1	Parent=FBgn0051183.1.mrna1;Target=FBgn0051183.1 1056 1200 +
Chr2	stalkie_big_nohaplotig	CDS	95997765	95998191	.	+	0	Parent=FBgn0051183.1.mrna1;Target=FBgn0051183.1 1201 1627 +
Chr2	stalkie_big_nohaplotig	CDS	95998269	95998991	.	+	2	Parent=FBgn0051183.1.mrna1;Target=FBgn0051183.1 1628 2350 +
Chr2	stalkie_big_nohaplotig	CDS	96001397	96001561	.	+	2	Parent=FBgn0051183.1.mrna1;Target=FBgn0051183.1 2351 2515 +
Chr2	stalkie_big_nohaplotig	CDS	96005531	96005708	.	+	2	Parent=FBgn0051183.1.mrna1;Target=FBgn0051183.1 2516 2693 +
Chr2	stalkie_big_nohaplotig	CDS	96006966	96008688	.	+	1	Parent=FBgn0051183.1.mrna1;Target=FBgn0051183.1 2694 4416 +
Chr2	gffcl	locus	95987152	95989703	.	-	.	ID=RLOC_00019674;geneIDs=comp151553_c1_seq1.path1;transcripts=comp151553_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95987152	95989703	.	-	.	ID=comp151553_c1_seq1.mrna1;geneID=comp151553_c1_seq1.path1;Name=comp151553_c1_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=557;mismatches=4;indels=0;unknowns=0;locus=RLOC_00019674
Chr2	stalkie_big_nohaplotig	exon	95987152	95987365	100	-	.	Parent=comp151553_c1_seq1.mrna1;Target=comp151553_c1_seq1 1 214 -
Chr2	stalkie_big_nohaplotig	exon	95988521	95988737	100	-	.	Parent=comp151553_c1_seq1.mrna1;Target=comp151553_c1_seq1 215 431 -
Chr2	stalkie_big_nohaplotig	exon	95989574	95989703	96	-	.	Parent=comp151553_c1_seq1.mrna1;Target=comp151553_c1_seq1 432 561 -
Chr2	stalkie_big_nohaplotig	CDS	95988664	95988737	.	-	2	Parent=comp151553_c1_seq1.mrna1;Target=comp151553_c1_seq1 358 431 .
Chr2	stalkie_big_nohaplotig	CDS	95989574	95989625	.	-	0	Parent=comp151553_c1_seq1.mrna1;Target=comp151553_c1_seq1 432 483 .
Chr2	gffcl	locus	95990578	98112086	.	.	.	ID=RLOC_00019675;geneIDs=FBgn0003482.1.path1,FBgn0013576.1.path1,FBgn0038371.1.path1,comp117857_c0_seq1.path1,comp155048_c0_seq1.path1,comp162104_c2_seq1.path1;transcripts=comp162104_c2_seq1.mrna1,FBgn0038371.1.mrna1,comp155048_c0_seq1.mrna1,FBgn0003482.1.mrna1,FBgn0013576.1.mrna1,comp117857_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	95990578	98112086	.	-	.	ID=comp162104_c2_seq1.mrna1;geneID=comp162104_c2_seq1.path1;Name=comp162104_c2_seq1;Dir=sensecoverage=82.7;identity=99.3;matches=3982;mismatches=18;indels=12;unknowns=0;locus=RLOC_00019675
Chr2	stalkie_big_nohaplotig	exon	95990578	95990580	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 4572 4574 +
Chr2	stalkie_big_nohaplotig	exon	95996270	95996276	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 4565 4571 +
Chr2	stalkie_big_nohaplotig	exon	96004058	96004061	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 4561 4564 +
Chr2	stalkie_big_nohaplotig	exon	96009218	96009222	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 4556 4560 +
Chr2	stalkie_big_nohaplotig	exon	96024083	96024084	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 4554 4555 +
Chr2	stalkie_big_nohaplotig	exon	96039877	96039906	64	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 4526 4553 +
Chr2	stalkie_big_nohaplotig	exon	96047625	96047634	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 4516 4525 +
Chr2	stalkie_big_nohaplotig	exon	96069859	96069861	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 4513 4515 +
Chr2	stalkie_big_nohaplotig	exon	96084163	96084165	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 4510 4512 +
Chr2	stalkie_big_nohaplotig	exon	96091188	96091197	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 4500 4509 +
Chr2	stalkie_big_nohaplotig	exon	96099275	96099277	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 4497 4499 +
Chr2	stalkie_big_nohaplotig	exon	96102138	96102139	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 4495 4496 +
Chr2	stalkie_big_nohaplotig	exon	96103316	96103319	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 4491 4494 +
Chr2	stalkie_big_nohaplotig	exon	96118833	96118836	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 4487 4490 +
Chr2	stalkie_big_nohaplotig	exon	96119248	96119257	80	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 4477 4486 +
Chr2	stalkie_big_nohaplotig	exon	96122225	96122232	87	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 4469 4476 +
Chr2	stalkie_big_nohaplotig	exon	96126760	96126785	55	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 4435 4468 +
Chr2	stalkie_big_nohaplotig	exon	97917027	97917227	99	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 3671 3871 +
Chr2	stalkie_big_nohaplotig	exon	97918470	97918632	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 3508 3670 +
Chr2	stalkie_big_nohaplotig	exon	97996634	97996785	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 3356 3507 +
Chr2	stalkie_big_nohaplotig	exon	97998962	97999122	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 3195 3355 +
Chr2	stalkie_big_nohaplotig	exon	97999193	97999700	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 2687 3194 +
Chr2	stalkie_big_nohaplotig	exon	98001719	98001885	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 2520 2686 +
Chr2	stalkie_big_nohaplotig	exon	98001947	98002053	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 2413 2519 +
Chr2	stalkie_big_nohaplotig	exon	98002121	98002591	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 1942 2412 +
Chr2	stalkie_big_nohaplotig	exon	98018736	98019041	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 1636 1941 +
Chr2	stalkie_big_nohaplotig	exon	98034928	98035031	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 1532 1635 +
Chr2	stalkie_big_nohaplotig	exon	98048362	98048433	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 1460 1531 +
Chr2	stalkie_big_nohaplotig	exon	98080082	98080566	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 975 1459 +
Chr2	stalkie_big_nohaplotig	exon	98081146	98081477	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 643 974 +
Chr2	stalkie_big_nohaplotig	exon	98109014	98109272	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 384 642 +
Chr2	stalkie_big_nohaplotig	exon	98111706	98112086	100	-	.	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 3 383 +
Chr2	stalkie_big_nohaplotig	CDS	96126775	96126785	.	-	1	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 4435 4451 +
Chr2	stalkie_big_nohaplotig	CDS	97917027	97917227	.	-	1	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 3671 3871 +
Chr2	stalkie_big_nohaplotig	CDS	97918470	97918632	.	-	2	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 3508 3670 +
Chr2	stalkie_big_nohaplotig	CDS	97996634	97996785	.	-	1	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 3356 3507 +
Chr2	stalkie_big_nohaplotig	CDS	97998962	97999122	.	-	0	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 3195 3355 +
Chr2	stalkie_big_nohaplotig	CDS	97999193	97999700	.	-	1	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 2687 3194 +
Chr2	stalkie_big_nohaplotig	CDS	98001719	98001885	.	-	0	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 2520 2686 +
Chr2	stalkie_big_nohaplotig	CDS	98001947	98002053	.	-	2	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 2413 2519 +
Chr2	stalkie_big_nohaplotig	CDS	98002121	98002591	.	-	2	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 1942 2412 +
Chr2	stalkie_big_nohaplotig	CDS	98018736	98019041	.	-	2	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 1636 1941 +
Chr2	stalkie_big_nohaplotig	CDS	98034928	98035031	.	-	1	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 1532 1635 +
Chr2	stalkie_big_nohaplotig	CDS	98048362	98048433	.	-	1	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 1460 1531 +
Chr2	stalkie_big_nohaplotig	CDS	98080082	98080566	.	-	0	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 975 1459 +
Chr2	stalkie_big_nohaplotig	CDS	98081146	98081400	.	-	0	Parent=comp162104_c2_seq1.mrna1;Target=comp162104_c2_seq1 720 974 +
Chr2	stalkie_big_nohaplotig	mRNA	96069610	96070563	.	+	.	ID=FBgn0038371.1.mrna1;geneID=FBgn0038371.1.path1;Name=FBgn0038371.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=953;mismatches=1;indels=0;unknowns=0;Target=FBgn0038371.1 954 1 .;locus=RLOC_00019675
Chr2	stalkie_big_nohaplotig	exon	96069610	96070563	99	+	.	Parent=FBgn0038371.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96069610	96070563	.	+	0	Parent=FBgn0038371.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96102935	96104401	.	-	.	ID=comp155048_c0_seq1.mrna1;geneID=comp155048_c0_seq1.path1;Name=comp155048_c0_seq1;Dir=antisensecoverage=98.6;identity=99.1;matches=1156;mismatches=11;indels=0;unknowns=0;locus=RLOC_00019675
Chr2	stalkie_big_nohaplotig	exon	96102935	96103158	99	-	.	Parent=comp155048_c0_seq1.mrna1;Target=comp155048_c0_seq1 1 224 -
Chr2	stalkie_big_nohaplotig	exon	96103213	96103401	99	-	.	Parent=comp155048_c0_seq1.mrna1;Target=comp155048_c0_seq1 225 413 -
Chr2	stalkie_big_nohaplotig	exon	96103459	96103587	97	-	.	Parent=comp155048_c0_seq1.mrna1;Target=comp155048_c0_seq1 414 542 -
Chr2	stalkie_big_nohaplotig	exon	96103646	96103844	99	-	.	Parent=comp155048_c0_seq1.mrna1;Target=comp155048_c0_seq1 543 741 -
Chr2	stalkie_big_nohaplotig	exon	96103917	96104023	100	-	.	Parent=comp155048_c0_seq1.mrna1;Target=comp155048_c0_seq1 742 848 -
Chr2	stalkie_big_nohaplotig	exon	96104083	96104401	98	-	.	Parent=comp155048_c0_seq1.mrna1;Target=comp155048_c0_seq1 849 1167 -
Chr2	stalkie_big_nohaplotig	CDS	96103126	96103158	.	-	0	Parent=comp155048_c0_seq1.mrna1;Target=comp155048_c0_seq1 192 224 .
Chr2	stalkie_big_nohaplotig	CDS	96103213	96103401	.	-	0	Parent=comp155048_c0_seq1.mrna1;Target=comp155048_c0_seq1 225 413 .
Chr2	stalkie_big_nohaplotig	CDS	96103459	96103587	.	-	0	Parent=comp155048_c0_seq1.mrna1;Target=comp155048_c0_seq1 414 542 .
Chr2	stalkie_big_nohaplotig	CDS	96103646	96103819	.	-	0	Parent=comp155048_c0_seq1.mrna1;Target=comp155048_c0_seq1 543 716 .
Chr2	stalkie_big_nohaplotig	mRNA	96103129	96104261	.	-	.	ID=FBgn0003482.1.mrna1;geneID=FBgn0003482.1.path1;Name=FBgn0003482.1;Dir=sensecoverage=100.0;identity=98.8;matches=812;mismatches=10;indels=0;unknowns=0;locus=RLOC_00019675
Chr2	stalkie_big_nohaplotig	exon	96103129	96103158	96	-	.	Parent=FBgn0003482.1.mrna1;Target=FBgn0003482.1 793 822 +
Chr2	stalkie_big_nohaplotig	exon	96103213	96103401	99	-	.	Parent=FBgn0003482.1.mrna1;Target=FBgn0003482.1 604 792 +
Chr2	stalkie_big_nohaplotig	exon	96103459	96103587	97	-	.	Parent=FBgn0003482.1.mrna1;Target=FBgn0003482.1 475 603 +
Chr2	stalkie_big_nohaplotig	exon	96103646	96103833	99	-	.	Parent=FBgn0003482.1.mrna1;Target=FBgn0003482.1 287 474 +
Chr2	stalkie_big_nohaplotig	exon	96103917	96104023	100	-	.	Parent=FBgn0003482.1.mrna1;Target=FBgn0003482.1 180 286 +
Chr2	stalkie_big_nohaplotig	exon	96104083	96104261	97	-	.	Parent=FBgn0003482.1.mrna1;Target=FBgn0003482.1 1 179 +
Chr2	stalkie_big_nohaplotig	CDS	96103129	96103158	.	-	0	Parent=FBgn0003482.1.mrna1;Target=FBgn0003482.1 793 822 +
Chr2	stalkie_big_nohaplotig	CDS	96103213	96103401	.	-	0	Parent=FBgn0003482.1.mrna1;Target=FBgn0003482.1 604 792 +
Chr2	stalkie_big_nohaplotig	CDS	96103459	96103587	.	-	0	Parent=FBgn0003482.1.mrna1;Target=FBgn0003482.1 475 603 +
Chr2	stalkie_big_nohaplotig	CDS	96103646	96103833	.	-	2	Parent=FBgn0003482.1.mrna1;Target=FBgn0003482.1 287 474 +
Chr2	stalkie_big_nohaplotig	CDS	96103917	96104023	.	-	1	Parent=FBgn0003482.1.mrna1;Target=FBgn0003482.1 180 286 +
Chr2	stalkie_big_nohaplotig	CDS	96104083	96104261	.	-	0	Parent=FBgn0003482.1.mrna1;Target=FBgn0003482.1 1 179 +
Chr2	stalkie_big_nohaplotig	mRNA	97917029	98081469	.	-	.	ID=FBgn0013576.1.mrna1;geneID=FBgn0013576.1.path1;Name=FBgn0013576.1;Dir=sensecoverage=84.7;identity=100.0;matches=3194;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019675
Chr2	stalkie_big_nohaplotig	exon	97917029	97917227	99	-	.	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 2997 3195 +
Chr2	stalkie_big_nohaplotig	exon	97992854	97993016	100	-	.	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 2834 2996 +
Chr2	stalkie_big_nohaplotig	exon	97996634	97996785	100	-	.	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 2682 2833 +
Chr2	stalkie_big_nohaplotig	exon	97998962	97999122	100	-	.	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 2521 2681 +
Chr2	stalkie_big_nohaplotig	exon	97999193	97999676	100	-	.	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 2037 2520 +
Chr2	stalkie_big_nohaplotig	exon	98001719	98001885	100	-	.	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 1870 2036 +
Chr2	stalkie_big_nohaplotig	exon	98001947	98002053	100	-	.	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 1763 1869 +
Chr2	stalkie_big_nohaplotig	exon	98002121	98002591	100	-	.	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 1292 1762 +
Chr2	stalkie_big_nohaplotig	exon	98018736	98019041	100	-	.	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 986 1291 +
Chr2	stalkie_big_nohaplotig	exon	98034928	98035031	100	-	.	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 882 985 +
Chr2	stalkie_big_nohaplotig	exon	98048362	98048433	100	-	.	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 810 881 +
Chr2	stalkie_big_nohaplotig	exon	98080082	98080566	100	-	.	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 325 809 +
Chr2	stalkie_big_nohaplotig	exon	98081146	98081469	100	-	.	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 1 324 +
Chr2	stalkie_big_nohaplotig	CDS	97917029	97917227	.	-	1	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 2997 3195 +
Chr2	stalkie_big_nohaplotig	CDS	97992854	97993016	.	-	2	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 2834 2996 +
Chr2	stalkie_big_nohaplotig	CDS	97996634	97996785	.	-	1	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 2682 2833 +
Chr2	stalkie_big_nohaplotig	CDS	97998962	97999122	.	-	0	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 2521 2681 +
Chr2	stalkie_big_nohaplotig	CDS	97999193	97999676	.	-	1	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 2037 2520 +
Chr2	stalkie_big_nohaplotig	CDS	98001719	98001885	.	-	0	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 1870 2036 +
Chr2	stalkie_big_nohaplotig	CDS	98001947	98002053	.	-	2	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 1763 1869 +
Chr2	stalkie_big_nohaplotig	CDS	98002121	98002591	.	-	2	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 1292 1762 +
Chr2	stalkie_big_nohaplotig	CDS	98018736	98019041	.	-	2	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 986 1291 +
Chr2	stalkie_big_nohaplotig	CDS	98034928	98035031	.	-	1	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 882 985 +
Chr2	stalkie_big_nohaplotig	CDS	98048362	98048433	.	-	1	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 810 881 +
Chr2	stalkie_big_nohaplotig	CDS	98080082	98080566	.	-	0	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 325 809 +
Chr2	stalkie_big_nohaplotig	CDS	98081146	98081469	.	-	0	Parent=FBgn0013576.1.mrna1;Target=FBgn0013576.1 1 324 +
Chr2	stalkie_big_nohaplotig	mRNA	98019020	98019661	.	-	.	ID=comp117857_c0_seq1.mrna1;geneID=comp117857_c0_seq1.path1;Name=comp117857_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=400;mismatches=0;indels=1;unknowns=0;locus=RLOC_00019675
Chr2	stalkie_big_nohaplotig	exon	98019020	98019041	100	-	.	Parent=comp117857_c0_seq1.mrna1;Target=comp117857_c0_seq1 1 22 -
Chr2	stalkie_big_nohaplotig	exon	98019283	98019661	99	-	.	Parent=comp117857_c0_seq1.mrna1;Target=comp117857_c0_seq1 23 400 -
Chr2	stalkie_big_nohaplotig	CDS	98019022	98019041	.	-	2	Parent=comp117857_c0_seq1.mrna1;Target=comp117857_c0_seq1 3 22 .
Chr2	stalkie_big_nohaplotig	CDS	98019283	98019562	.	-	0	Parent=comp117857_c0_seq1.mrna1;Target=comp117857_c0_seq1 23 302 .
Chr2	gffcl	locus	96001810	96003701	.	-	.	ID=RLOC_00019676;geneIDs=ORF1408.path1;transcripts=ORF1408.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96001810	96003701	.	-	.	ID=ORF1408.mrna1;geneID=ORF1408.path1;Name=ORF1408;Dir=sensecoverage=100.0;identity=99.7;matches=1110;mismatches=3;indels=0;unknowns=0;locus=RLOC_00019676
Chr2	stalkie_big_nohaplotig	exon	96001810	96002048	99	-	.	Parent=ORF1408.mrna1;Target=ORF1408 875 1113 +
Chr2	stalkie_big_nohaplotig	exon	96002828	96003701	99	-	.	Parent=ORF1408.mrna1;Target=ORF1408 1 874 +
Chr2	stalkie_big_nohaplotig	CDS	96001810	96002048	.	-	2	Parent=ORF1408.mrna1;Target=ORF1408 875 1113 +
Chr2	stalkie_big_nohaplotig	CDS	96002828	96003701	.	-	0	Parent=ORF1408.mrna1;Target=ORF1408 1 874 +
Chr2	gffcl	locus	96016778	96019714	.	+	.	ID=RLOC_00019677;geneIDs=FBgn0038376.1.path1;transcripts=FBgn0038376.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96016778	96019714	.	+	.	ID=FBgn0038376.1.mrna1;geneID=FBgn0038376.1.path1;Name=FBgn0038376.1;Dir=sensecoverage=100.0;identity=100.0;matches=2573;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019677
Chr2	stalkie_big_nohaplotig	exon	96016778	96017080	100	+	.	Parent=FBgn0038376.1.mrna1;Target=FBgn0038376.1 1 303 +
Chr2	stalkie_big_nohaplotig	exon	96017141	96017340	100	+	.	Parent=FBgn0038376.1.mrna1;Target=FBgn0038376.1 304 503 +
Chr2	stalkie_big_nohaplotig	exon	96017404	96017726	100	+	.	Parent=FBgn0038376.1.mrna1;Target=FBgn0038376.1 504 826 +
Chr2	stalkie_big_nohaplotig	exon	96017783	96018187	99	+	.	Parent=FBgn0038376.1.mrna1;Target=FBgn0038376.1 827 1231 +
Chr2	stalkie_big_nohaplotig	exon	96018251	96018426	100	+	.	Parent=FBgn0038376.1.mrna1;Target=FBgn0038376.1 1232 1407 +
Chr2	stalkie_big_nohaplotig	exon	96018490	96019039	100	+	.	Parent=FBgn0038376.1.mrna1;Target=FBgn0038376.1 1408 1957 +
Chr2	stalkie_big_nohaplotig	exon	96019098	96019714	100	+	.	Parent=FBgn0038376.1.mrna1;Target=FBgn0038376.1 1958 2574 +
Chr2	stalkie_big_nohaplotig	CDS	96016778	96017080	.	+	0	Parent=FBgn0038376.1.mrna1;Target=FBgn0038376.1 1 303 +
Chr2	stalkie_big_nohaplotig	CDS	96017141	96017340	.	+	0	Parent=FBgn0038376.1.mrna1;Target=FBgn0038376.1 304 503 +
Chr2	stalkie_big_nohaplotig	CDS	96017404	96017726	.	+	1	Parent=FBgn0038376.1.mrna1;Target=FBgn0038376.1 504 826 +
Chr2	stalkie_big_nohaplotig	CDS	96017783	96018187	.	+	2	Parent=FBgn0038376.1.mrna1;Target=FBgn0038376.1 827 1231 +
Chr2	stalkie_big_nohaplotig	CDS	96018251	96018426	.	+	2	Parent=FBgn0038376.1.mrna1;Target=FBgn0038376.1 1232 1407 +
Chr2	stalkie_big_nohaplotig	CDS	96018490	96019039	.	+	0	Parent=FBgn0038376.1.mrna1;Target=FBgn0038376.1 1408 1957 +
Chr2	stalkie_big_nohaplotig	CDS	96019098	96019714	.	+	2	Parent=FBgn0038376.1.mrna1;Target=FBgn0038376.1 1958 2574 +
Chr2	gffcl	locus	96023759	96024015	.	+	.	ID=RLOC_00019678;geneIDs=comp95387_c0_seq1.path1;transcripts=comp95387_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96023759	96024015	.	+	.	ID=comp95387_c0_seq1.mrna1;geneID=comp95387_c0_seq1.path1;Name=comp95387_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=256;mismatches=1;indels=0;unknowns=0;Target=comp95387_c0_seq1 257 1 .;CDS_Target=comp95387_c0_seq1 123 1 .;locus=RLOC_00019678
Chr2	stalkie_big_nohaplotig	exon	96023759	96024015	99	+	.	Parent=comp95387_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96023759	96023881	.	+	0	Parent=comp95387_c0_seq1.mrna1
Chr2	gffcl	locus	96038014	96041530	.	-	.	ID=RLOC_00019679;geneIDs=FBgn0038373.1.path1;transcripts=FBgn0038373.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96038014	96041530	.	-	.	ID=FBgn0038373.1.mrna1;geneID=FBgn0038373.1.path1;Name=FBgn0038373.1;Dir=sensecoverage=100.0;identity=99.5;matches=1367;mismatches=7;indels=0;unknowns=0;locus=RLOC_00019679
Chr2	stalkie_big_nohaplotig	exon	96038014	96038384	100	-	.	Parent=FBgn0038373.1.mrna1;Target=FBgn0038373.1 1004 1374 +
Chr2	stalkie_big_nohaplotig	exon	96038447	96039183	99	-	.	Parent=FBgn0038373.1.mrna1;Target=FBgn0038373.1 267 1003 +
Chr2	stalkie_big_nohaplotig	exon	96041194	96041444	98	-	.	Parent=FBgn0038373.1.mrna1;Target=FBgn0038373.1 16 266 +
Chr2	stalkie_big_nohaplotig	exon	96041516	96041530	100	-	.	Parent=FBgn0038373.1.mrna1;Target=FBgn0038373.1 1 15 +
Chr2	stalkie_big_nohaplotig	CDS	96038014	96038384	.	-	2	Parent=FBgn0038373.1.mrna1;Target=FBgn0038373.1 1004 1374 +
Chr2	stalkie_big_nohaplotig	CDS	96038447	96039183	.	-	1	Parent=FBgn0038373.1.mrna1;Target=FBgn0038373.1 267 1003 +
Chr2	stalkie_big_nohaplotig	CDS	96041194	96041444	.	-	0	Parent=FBgn0038373.1.mrna1;Target=FBgn0038373.1 16 266 +
Chr2	stalkie_big_nohaplotig	CDS	96041516	96041530	.	-	0	Parent=FBgn0038373.1.mrna1;Target=FBgn0038373.1 1 15 +
Chr2	gffcl	locus	96048510	96049505	.	+	.	ID=RLOC_00019680;geneIDs=ORF1792.path1;transcripts=ORF1792.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96048510	96049505	.	+	.	ID=ORF1792.mrna1;geneID=ORF1792.path1;Name=ORF1792;Dir=indeterminatecoverage=100.0;identity=99.9;matches=995;mismatches=1;indels=0;unknowns=0;Target=ORF1792 996 1 .;locus=RLOC_00019680
Chr2	stalkie_big_nohaplotig	exon	96048510	96049505	99	+	.	Parent=ORF1792.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96048510	96049505	.	+	0	Parent=ORF1792.mrna1
Chr2	gffcl	locus	96057909	96071314	.	-	.	ID=RLOC_00019681;geneIDs=FBgn0003483.1.path1;transcripts=FBgn0003483.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96057909	96071314	.	-	.	ID=FBgn0003483.1.mrna1;geneID=FBgn0003483.1.path1;Name=FBgn0003483.1;Dir=sensecoverage=100.0;identity=99.9;matches=4320;mismatches=6;indels=0;unknowns=0;locus=RLOC_00019681
Chr2	stalkie_big_nohaplotig	exon	96057909	96058038	100	-	.	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 4197 4326 +
Chr2	stalkie_big_nohaplotig	exon	96058097	96058315	100	-	.	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 3978 4196 +
Chr2	stalkie_big_nohaplotig	exon	96058375	96058496	100	-	.	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 3856 3977 +
Chr2	stalkie_big_nohaplotig	exon	96058606	96059175	99	-	.	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 3286 3855 +
Chr2	stalkie_big_nohaplotig	exon	96059236	96059577	100	-	.	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 2944 3285 +
Chr2	stalkie_big_nohaplotig	exon	96059641	96059868	100	-	.	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 2716 2943 +
Chr2	stalkie_big_nohaplotig	exon	96059941	96060684	99	-	.	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 1972 2715 +
Chr2	stalkie_big_nohaplotig	exon	96062115	96062251	99	-	.	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 1835 1971 +
Chr2	stalkie_big_nohaplotig	exon	96062317	96062647	99	-	.	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 1504 1834 +
Chr2	stalkie_big_nohaplotig	exon	96064391	96064557	100	-	.	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 1337 1503 +
Chr2	stalkie_big_nohaplotig	exon	96066697	96066845	100	-	.	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 1188 1336 +
Chr2	stalkie_big_nohaplotig	exon	96066910	96067121	100	-	.	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 976 1187 +
Chr2	stalkie_big_nohaplotig	exon	96067185	96067301	100	-	.	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 859 975 +
Chr2	stalkie_big_nohaplotig	exon	96067358	96067597	100	-	.	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 619 858 +
Chr2	stalkie_big_nohaplotig	exon	96067664	96067813	100	-	.	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 469 618 +
Chr2	stalkie_big_nohaplotig	exon	96070788	96071045	100	-	.	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 211 468 +
Chr2	stalkie_big_nohaplotig	exon	96071105	96071314	100	-	.	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 1 210 +
Chr2	stalkie_big_nohaplotig	CDS	96057909	96058038	.	-	1	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 4197 4326 +
Chr2	stalkie_big_nohaplotig	CDS	96058097	96058315	.	-	1	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 3978 4196 +
Chr2	stalkie_big_nohaplotig	CDS	96058375	96058496	.	-	0	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 3856 3977 +
Chr2	stalkie_big_nohaplotig	CDS	96058606	96059175	.	-	0	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 3286 3855 +
Chr2	stalkie_big_nohaplotig	CDS	96059236	96059577	.	-	0	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 2944 3285 +
Chr2	stalkie_big_nohaplotig	CDS	96059641	96059868	.	-	0	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 2716 2943 +
Chr2	stalkie_big_nohaplotig	CDS	96059941	96060684	.	-	0	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 1972 2715 +
Chr2	stalkie_big_nohaplotig	CDS	96062115	96062251	.	-	2	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 1835 1971 +
Chr2	stalkie_big_nohaplotig	CDS	96062317	96062647	.	-	0	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 1504 1834 +
Chr2	stalkie_big_nohaplotig	CDS	96064391	96064557	.	-	2	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 1337 1503 +
Chr2	stalkie_big_nohaplotig	CDS	96066697	96066845	.	-	1	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 1188 1336 +
Chr2	stalkie_big_nohaplotig	CDS	96066910	96067121	.	-	0	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 976 1187 +
Chr2	stalkie_big_nohaplotig	CDS	96067185	96067301	.	-	0	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 859 975 +
Chr2	stalkie_big_nohaplotig	CDS	96067358	96067597	.	-	0	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 619 858 +
Chr2	stalkie_big_nohaplotig	CDS	96067664	96067813	.	-	0	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 469 618 +
Chr2	stalkie_big_nohaplotig	CDS	96070788	96071045	.	-	0	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 211 468 +
Chr2	stalkie_big_nohaplotig	CDS	96071105	96071314	.	-	0	Parent=FBgn0003483.1.mrna1;Target=FBgn0003483.1 1 210 +
Chr2	gffcl	locus	96073869	96074802	.	+	.	ID=RLOC_00019682;geneIDs=FBgn0038396.1.path1;transcripts=FBgn0038396.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96073869	96074802	.	+	.	ID=FBgn0038396.1.mrna1;geneID=FBgn0038396.1.path1;Name=FBgn0038396.1;Dir=sensecoverage=100.0;identity=100.0;matches=879;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019682
Chr2	stalkie_big_nohaplotig	exon	96073869	96074156	100	+	.	Parent=FBgn0038396.1.mrna1;Target=FBgn0038396.1 1 288 +
Chr2	stalkie_big_nohaplotig	exon	96074212	96074802	100	+	.	Parent=FBgn0038396.1.mrna1;Target=FBgn0038396.1 289 879 +
Chr2	stalkie_big_nohaplotig	CDS	96073869	96074156	.	+	0	Parent=FBgn0038396.1.mrna1;Target=FBgn0038396.1 1 288 +
Chr2	stalkie_big_nohaplotig	CDS	96074212	96074802	.	+	0	Parent=FBgn0038396.1.mrna1;Target=FBgn0038396.1 289 879 +
Chr2	gffcl	locus	96074814	96075074	.	+	.	ID=RLOC_00019683;geneIDs=FBgn0037602.1.path1;transcripts=FBgn0037602.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96074814	96075074	.	+	.	ID=FBgn0037602.1.mrna1;geneID=FBgn0037602.1.path1;Name=FBgn0037602.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=261;mismatches=0;indels=0;unknowns=0;Target=FBgn0037602.1 261 1 .;locus=RLOC_00019683
Chr2	stalkie_big_nohaplotig	exon	96074814	96075074	100	+	.	Parent=FBgn0037602.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96074814	96075074	.	+	0	Parent=FBgn0037602.1.mrna1
Chr2	gffcl	locus	96075140	96076525	.	-	.	ID=RLOC_00019684;geneIDs=FBgn0000447.1.path1;transcripts=FBgn0000447.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96075140	96076525	.	-	.	ID=FBgn0000447.1.mrna1;geneID=FBgn0000447.1.path1;Name=FBgn0000447.1;Dir=sensecoverage=100.0;identity=100.0;matches=1260;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019684
Chr2	stalkie_big_nohaplotig	exon	96075140	96076093	100	-	.	Parent=FBgn0000447.1.mrna1;Target=FBgn0000447.1 307 1260 +
Chr2	stalkie_big_nohaplotig	exon	96076158	96076367	100	-	.	Parent=FBgn0000447.1.mrna1;Target=FBgn0000447.1 97 306 +
Chr2	stalkie_big_nohaplotig	exon	96076430	96076525	100	-	.	Parent=FBgn0000447.1.mrna1;Target=FBgn0000447.1 1 96 +
Chr2	stalkie_big_nohaplotig	CDS	96075140	96076093	.	-	0	Parent=FBgn0000447.1.mrna1;Target=FBgn0000447.1 307 1260 +
Chr2	stalkie_big_nohaplotig	CDS	96076158	96076367	.	-	0	Parent=FBgn0000447.1.mrna1;Target=FBgn0000447.1 97 306 +
Chr2	stalkie_big_nohaplotig	CDS	96076430	96076525	.	-	0	Parent=FBgn0000447.1.mrna1;Target=FBgn0000447.1 1 96 +
Chr2	gffcl	locus	96078457	96080578	.	-	.	ID=RLOC_00019685;geneIDs=FBgn0039357.1.path1,comp146636_c0_seq1.path1;transcripts=comp146636_c0_seq1.mrna1,FBgn0039357.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96078457	96080578	.	-	.	ID=comp146636_c0_seq1.mrna1;geneID=comp146636_c0_seq1.path1;Name=comp146636_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1830;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019685
Chr2	stalkie_big_nohaplotig	exon	96078457	96078825	100	-	.	Parent=comp146636_c0_seq1.mrna1;Target=comp146636_c0_seq1 1831 1463 .
Chr2	stalkie_big_nohaplotig	exon	96078891	96079044	100	-	.	Parent=comp146636_c0_seq1.mrna1;Target=comp146636_c0_seq1 1462 1309 .
Chr2	stalkie_big_nohaplotig	exon	96079111	96079455	100	-	.	Parent=comp146636_c0_seq1.mrna1;Target=comp146636_c0_seq1 1308 964 .
Chr2	stalkie_big_nohaplotig	exon	96079508	96079923	100	-	.	Parent=comp146636_c0_seq1.mrna1;Target=comp146636_c0_seq1 963 548 .
Chr2	stalkie_big_nohaplotig	exon	96079980	96080246	99	-	.	Parent=comp146636_c0_seq1.mrna1;Target=comp146636_c0_seq1 547 281 .
Chr2	stalkie_big_nohaplotig	exon	96080299	96080578	100	-	.	Parent=comp146636_c0_seq1.mrna1;Target=comp146636_c0_seq1 280 1 .
Chr2	stalkie_big_nohaplotig	CDS	96079332	96079455	.	-	1	Parent=comp146636_c0_seq1.mrna1;Target=comp146636_c0_seq1 1087 964 .
Chr2	stalkie_big_nohaplotig	CDS	96079508	96079923	.	-	0	Parent=comp146636_c0_seq1.mrna1;Target=comp146636_c0_seq1 963 548 .
Chr2	stalkie_big_nohaplotig	CDS	96079980	96080246	.	-	0	Parent=comp146636_c0_seq1.mrna1;Target=comp146636_c0_seq1 547 281 .
Chr2	stalkie_big_nohaplotig	CDS	96080299	96080415	.	-	0	Parent=comp146636_c0_seq1.mrna1;Target=comp146636_c0_seq1 280 164 .
Chr2	stalkie_big_nohaplotig	mRNA	96079335	96080484	.	-	.	ID=FBgn0039357.1.mrna1;geneID=FBgn0039357.1.path1;Name=FBgn0039357.1;Dir=sensecoverage=100.0;identity=99.9;matches=887;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019685
Chr2	stalkie_big_nohaplotig	exon	96079335	96079455	100	-	.	Parent=FBgn0039357.1.mrna1;Target=FBgn0039357.1 768 888 +
Chr2	stalkie_big_nohaplotig	exon	96079508	96079923	100	-	.	Parent=FBgn0039357.1.mrna1;Target=FBgn0039357.1 352 767 +
Chr2	stalkie_big_nohaplotig	exon	96079980	96080246	99	-	.	Parent=FBgn0039357.1.mrna1;Target=FBgn0039357.1 85 351 +
Chr2	stalkie_big_nohaplotig	exon	96080299	96080351	100	-	.	Parent=FBgn0039357.1.mrna1;Target=FBgn0039357.1 32 84 +
Chr2	stalkie_big_nohaplotig	exon	96080454	96080484	100	-	.	Parent=FBgn0039357.1.mrna1;Target=FBgn0039357.1 1 31 +
Chr2	stalkie_big_nohaplotig	CDS	96079335	96079455	.	-	1	Parent=FBgn0039357.1.mrna1;Target=FBgn0039357.1 768 888 +
Chr2	stalkie_big_nohaplotig	CDS	96079508	96079923	.	-	0	Parent=FBgn0039357.1.mrna1;Target=FBgn0039357.1 352 767 +
Chr2	stalkie_big_nohaplotig	CDS	96079980	96080246	.	-	0	Parent=FBgn0039357.1.mrna1;Target=FBgn0039357.1 85 351 +
Chr2	stalkie_big_nohaplotig	CDS	96080299	96080351	.	-	2	Parent=FBgn0039357.1.mrna1;Target=FBgn0039357.1 32 84 +
Chr2	stalkie_big_nohaplotig	CDS	96080454	96080484	.	-	0	Parent=FBgn0039357.1.mrna1;Target=FBgn0039357.1 1 31 +
Chr2	gffcl	locus	96081614	96083323	.	+	.	ID=RLOC_00019686;geneIDs=FBgn0019637.1.path1;transcripts=FBgn0019637.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96081614	96083323	.	+	.	ID=FBgn0019637.1.mrna1;geneID=FBgn0019637.1.path1;Name=FBgn0019637.1;Dir=sensecoverage=100.0;identity=99.9;matches=1583;mismatches=0;indels=1;unknowns=0;Target=FBgn0019637.1 3 248 +;locus=RLOC_00019686
Chr2	stalkie_big_nohaplotig	exon	96081614	96081939	99	+	.	Parent=FBgn0019637.1.mrna1;Target=FBgn0019637.1 1 327 +
Chr2	stalkie_big_nohaplotig	exon	96082001	96082657	100	+	.	Parent=FBgn0019637.1.mrna1;Target=FBgn0019637.1 328 984 +
Chr2	stalkie_big_nohaplotig	exon	96082724	96083323	100	+	.	Parent=FBgn0019637.1.mrna1;Target=FBgn0019637.1 985 1584 +
Chr2	stalkie_big_nohaplotig	CDS	96081616	96081860	.	+	0	Parent=FBgn0019637.1.mrna1
Chr2	gffcl	locus	96084442	96084742	.	-	.	ID=RLOC_00019687;geneIDs=FBgn0044823.1.path1;transcripts=FBgn0044823.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96084442	96084742	.	-	.	ID=FBgn0044823.1.mrna1;geneID=FBgn0044823.1.path1;Name=FBgn0044823.1;Dir=indeterminatecoverage=98.4;identity=100.0;matches=301;mismatches=0;indels=0;unknowns=0;Target=FBgn0044823.1 301 1 .;CDS_Target=FBgn0044823.1 300 1 .;locus=RLOC_00019687
Chr2	stalkie_big_nohaplotig	exon	96084442	96084742	100	-	.	Parent=FBgn0044823.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96084443	96084742	.	-	0	Parent=FBgn0044823.1.mrna1
Chr2	gffcl	locus	96093459	96093997	.	-	.	ID=RLOC_00019688;geneIDs=Dp_FBgn0075529.1.path1;transcripts=Dp_FBgn0075529.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96093459	96093997	.	-	.	ID=Dp_FBgn0075529.1.mrna1;geneID=Dp_FBgn0075529.1.path1;Name=Dp_FBgn0075529.1;Dir=indeterminatecoverage=98.7;identity=100.0;matches=539;mismatches=0;indels=0;unknowns=0;Target=Dp_FBgn0075529.1 546 8 .;CDS_Target=Dp_FBgn0075529.1 546 10 .;locus=RLOC_00019688
Chr2	stalkie_big_nohaplotig	exon	96093459	96093997	100	-	.	Parent=Dp_FBgn0075529.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96093459	96093995	.	-	0	Parent=Dp_FBgn0075529.1.mrna1
Chr2	gffcl	locus	96102489	96102840	.	-	.	ID=RLOC_00019689;geneIDs=comp149383_c0_seq1.path1;transcripts=comp149383_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96102489	96102840	.	-	.	ID=comp149383_c0_seq1.mrna1;geneID=comp149383_c0_seq1.path1;Name=comp149383_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=348;mismatches=4;indels=1;unknowns=0;Target=comp149383_c0_seq1 353 1 .;CDS_Target=comp149383_c0_seq1 71 3 .;locus=RLOC_00019689
Chr2	stalkie_big_nohaplotig	exon	96102489	96102840	98	-	.	Parent=comp149383_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96102770	96102838	.	-	0	Parent=comp149383_c0_seq1.mrna1
Chr2	gffcl	locus	96113971	96114509	.	+	.	ID=RLOC_00019690;geneIDs=Dp_FBgn0075529.1.path2;transcripts=Dp_FBgn0075529.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	96113971	96114509	.	+	.	ID=Dp_FBgn0075529.1.mrna2;geneID=Dp_FBgn0075529.1.path2;Name=Dp_FBgn0075529.1;Dir=indeterminatecoverage=98.7;identity=100.0;matches=539;mismatches=0;indels=0;unknowns=0;Target=Dp_FBgn0075529.1 546 8 .;CDS_Target=Dp_FBgn0075529.1 546 10 .;locus=RLOC_00019690
Chr2	stalkie_big_nohaplotig	exon	96113971	96114509	100	+	.	Parent=Dp_FBgn0075529.1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	96113973	96114509	.	+	0	Parent=Dp_FBgn0075529.1.mrna2
Chr2	gffcl	locus	96132336	96141504	.	+	.	ID=RLOC_00019691;geneIDs=FBgn0000083.1.path1;transcripts=FBgn0000083.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96132336	96141504	.	+	.	ID=FBgn0000083.1.mrna1;geneID=FBgn0000083.1.path1;Name=FBgn0000083.1;Dir=sensecoverage=100.0;identity=100.0;matches=999;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019691
Chr2	stalkie_big_nohaplotig	exon	96132336	96132392	100	+	.	Parent=FBgn0000083.1.mrna1;Target=FBgn0000083.1 1 57 +
Chr2	stalkie_big_nohaplotig	exon	96137014	96137496	100	+	.	Parent=FBgn0000083.1.mrna1;Target=FBgn0000083.1 58 540 +
Chr2	stalkie_big_nohaplotig	exon	96137559	96137784	100	+	.	Parent=FBgn0000083.1.mrna1;Target=FBgn0000083.1 541 766 +
Chr2	stalkie_big_nohaplotig	exon	96137849	96138030	100	+	.	Parent=FBgn0000083.1.mrna1;Target=FBgn0000083.1 767 948 +
Chr2	stalkie_big_nohaplotig	exon	96141454	96141504	100	+	.	Parent=FBgn0000083.1.mrna1;Target=FBgn0000083.1 949 999 +
Chr2	stalkie_big_nohaplotig	CDS	96132336	96132392	.	+	0	Parent=FBgn0000083.1.mrna1;Target=FBgn0000083.1 1 57 +
Chr2	stalkie_big_nohaplotig	CDS	96137014	96137496	.	+	0	Parent=FBgn0000083.1.mrna1;Target=FBgn0000083.1 58 540 +
Chr2	stalkie_big_nohaplotig	CDS	96137559	96137784	.	+	0	Parent=FBgn0000083.1.mrna1;Target=FBgn0000083.1 541 766 +
Chr2	stalkie_big_nohaplotig	CDS	96137849	96138030	.	+	2	Parent=FBgn0000083.1.mrna1;Target=FBgn0000083.1 767 948 +
Chr2	stalkie_big_nohaplotig	CDS	96141454	96141504	.	+	0	Parent=FBgn0000083.1.mrna1;Target=FBgn0000083.1 949 999 +
Chr2	gffcl	locus	96139194	96140668	.	-	.	ID=RLOC_00019692;geneIDs=comp160281_c0_seq1.path1;transcripts=comp160281_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96139194	96140668	.	-	.	ID=comp160281_c0_seq1.mrna1;geneID=comp160281_c0_seq1.path1;Name=comp160281_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1473;mismatches=2;indels=0;unknowns=0;Target=comp160281_c0_seq1 1475 1 .;CDS_Target=comp160281_c0_seq1 325 176 .;locus=RLOC_00019692
Chr2	stalkie_big_nohaplotig	exon	96139194	96140668	99	-	.	Parent=comp160281_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96140344	96140493	.	-	0	Parent=comp160281_c0_seq1.mrna1
Chr2	gffcl	locus	96143123	96175726	.	+	.	ID=RLOC_00019693;geneIDs=comp154859_c0_seq1.path1;transcripts=comp154859_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96143123	96175726	.	+	.	ID=comp154859_c0_seq1.mrna1;geneID=comp154859_c0_seq1.path1;Name=comp154859_c0_seq1;Dir=indeterminatecoverage=27.8;identity=97.7;matches=170;mismatches=4;indels=0;unknowns=0;Target=comp154859_c0_seq1 84 1 .;locus=RLOC_00019693
Chr2	stalkie_big_nohaplotig	exon	96143123	96143249	100	+	.	Parent=comp154859_c0_seq1.mrna1;Target=comp154859_c0_seq1 127 1 .
Chr2	stalkie_big_nohaplotig	exon	96149567	96149576	100	+	.	Parent=comp154859_c0_seq1.mrna1;Target=comp154859_c0_seq1 137 128 .
Chr2	stalkie_big_nohaplotig	exon	96155590	96155600	100	+	.	Parent=comp154859_c0_seq1.mrna1;Target=comp154859_c0_seq1 148 138 .
Chr2	stalkie_big_nohaplotig	exon	96163522	96163531	70	+	.	Parent=comp154859_c0_seq1.mrna1;Target=comp154859_c0_seq1 158 149 .
Chr2	stalkie_big_nohaplotig	exon	96175711	96175726	93	+	.	Parent=comp154859_c0_seq1.mrna1;Target=comp154859_c0_seq1 174 159 .
Chr2	stalkie_big_nohaplotig	CDS	96143123	96143206	.	+	0	Parent=comp154859_c0_seq1.mrna1
Chr2	gffcl	locus	96171958	96191147	.	-	.	ID=RLOC_00019694;geneIDs=comp154121_c0_seq1.path1;transcripts=comp154121_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96171958	96191147	.	-	.	ID=comp154121_c0_seq1.mrna1;geneID=comp154121_c0_seq1.path1;Name=comp154121_c0_seq1;Dir=indeterminatecoverage=75.5;identity=65.8;matches=730;mismatches=55;indels=325;unknowns=0;Target=comp154121_c0_seq1 175 2 .;locus=RLOC_00019694
Chr2	stalkie_big_nohaplotig	exon	96171958	96171972	93	-	.	Parent=comp154121_c0_seq1.mrna1;Target=comp154121_c0_seq1 837 823 .
Chr2	stalkie_big_nohaplotig	exon	96178187	96178199	84	-	.	Parent=comp154121_c0_seq1.mrna1;Target=comp154121_c0_seq1 822 810 .
Chr2	stalkie_big_nohaplotig	exon	96178766	96178844	18	-	.	Parent=comp154121_c0_seq1.mrna1;Target=comp154121_c0_seq1 809 790 .
Chr2	stalkie_big_nohaplotig	exon	96178902	96178905	100	-	.	Parent=comp154121_c0_seq1.mrna1;Target=comp154121_c0_seq1 789 786 .
Chr2	stalkie_big_nohaplotig	exon	96178968	96179233	21	-	.	Parent=comp154121_c0_seq1.mrna1;Target=comp154121_c0_seq1 785 717 .
Chr2	stalkie_big_nohaplotig	exon	96179328	96179334	85	-	.	Parent=comp154121_c0_seq1.mrna1;Target=comp154121_c0_seq1 716 710 .
Chr2	stalkie_big_nohaplotig	exon	96179439	96179448	80	-	.	Parent=comp154121_c0_seq1.mrna1;Target=comp154121_c0_seq1 709 700 .
Chr2	stalkie_big_nohaplotig	exon	96179521	96179580	18	-	.	Parent=comp154121_c0_seq1.mrna1;Target=comp154121_c0_seq1 699 688 .
Chr2	stalkie_big_nohaplotig	exon	96179633	96179638	100	-	.	Parent=comp154121_c0_seq1.mrna1;Target=comp154121_c0_seq1 687 682 .
Chr2	stalkie_big_nohaplotig	exon	96179888	96179914	45	-	.	Parent=comp154121_c0_seq1.mrna1;Target=comp154121_c0_seq1 681 651 .
Chr2	stalkie_big_nohaplotig	exon	96190530	96191147	94	-	.	Parent=comp154121_c0_seq1.mrna1;Target=comp154121_c0_seq1 603 1 .
Chr2	stalkie_big_nohaplotig	CDS	96190973	96191146	.	-	0	Parent=comp154121_c0_seq1.mrna1
Chr2	gffcl	locus	96188722	96189297	.	-	.	ID=RLOC_00019695;geneIDs=FBgn0038774.1.path1;transcripts=FBgn0038774.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96188722	96189297	.	-	.	ID=FBgn0038774.1.mrna1;geneID=FBgn0038774.1.path1;Name=FBgn0038774.1;Dir=sensecoverage=95.4;identity=99.6;matches=499;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019695
Chr2	stalkie_big_nohaplotig	exon	96188722	96188901	100	-	.	Parent=FBgn0038774.1.mrna1;Target=FBgn0038774.1 346 525 +
Chr2	stalkie_big_nohaplotig	exon	96188977	96189297	99	-	.	Parent=FBgn0038774.1.mrna1;Target=FBgn0038774.1 25 345 +
Chr2	stalkie_big_nohaplotig	CDS	96188722	96188901	.	-	0	Parent=FBgn0038774.1.mrna1;Target=FBgn0038774.1 346 525 +
Chr2	stalkie_big_nohaplotig	CDS	96188977	96189297	.	-	0	Parent=FBgn0038774.1.mrna1;Target=FBgn0038774.1 25 345 +
Chr2	gffcl	locus	96191419	96191864	.	+	.	ID=RLOC_00019696;geneIDs=comp74768_c0_seq1.path1;transcripts=comp74768_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96191419	96191864	.	+	.	ID=comp74768_c0_seq1.mrna1;geneID=comp74768_c0_seq1.path1;Name=comp74768_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=445;mismatches=1;indels=0;unknowns=0;Target=comp74768_c0_seq1 446 1 .;CDS_Target=comp74768_c0_seq1 150 1 .;locus=RLOC_00019696
Chr2	stalkie_big_nohaplotig	exon	96191419	96191864	99	+	.	Parent=comp74768_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96191419	96191568	.	+	0	Parent=comp74768_c0_seq1.mrna1
Chr2	gffcl	locus	96196454	96196903	.	+	.	ID=RLOC_00019697;geneIDs=comp146258_c1_seq1.path1;transcripts=comp146258_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96196454	96196903	.	+	.	ID=comp146258_c1_seq1.mrna1;geneID=comp146258_c1_seq1.path1;Name=comp146258_c1_seq1;Dir=indeterminatecoverage=75.1;identity=94.3;matches=431;mismatches=18;indels=8;unknowns=0;Target=comp146258_c1_seq1 457 2 .;CDS_Target=comp146258_c1_seq1 22 2 .;locus=RLOC_00019697
Chr2	stalkie_big_nohaplotig	exon	96196454	96196903	94	+	.	Parent=comp146258_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96196454	96196474	.	+	0	Parent=comp146258_c1_seq1.mrna1
Chr2	gffcl	locus	96280125	96280659	.	-	.	ID=RLOC_00019698;geneIDs=comp140130_c0_seq1.path1;transcripts=comp140130_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96280125	96280659	.	-	.	ID=comp140130_c0_seq1.mrna1;geneID=comp140130_c0_seq1.path1;Name=comp140130_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=469;mismatches=3;indels=0;unknowns=0;Target=comp140130_c0_seq1 3 197 .;locus=RLOC_00019698
Chr2	stalkie_big_nohaplotig	exon	96280125	96280418	99	-	.	Parent=comp140130_c0_seq1.mrna1;Target=comp140130_c0_seq1 1 294 -
Chr2	stalkie_big_nohaplotig	exon	96280482	96280659	99	-	.	Parent=comp140130_c0_seq1.mrna1;Target=comp140130_c0_seq1 295 472 -
Chr2	stalkie_big_nohaplotig	CDS	96280127	96280321	.	-	0	Parent=comp140130_c0_seq1.mrna1
Chr2	gffcl	locus	96282078	96282350	.	-	.	ID=RLOC_00019699;geneIDs=comp118990_c0_seq1.path1;transcripts=comp118990_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96282078	96282350	.	-	.	ID=comp118990_c0_seq1.mrna1;geneID=comp118990_c0_seq1.path1;Name=comp118990_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=272;mismatches=1;indels=0;unknowns=0;Target=comp118990_c0_seq1 273 1 .;CDS_Target=comp118990_c0_seq1 133 68 .;locus=RLOC_00019699
Chr2	stalkie_big_nohaplotig	exon	96282078	96282350	99	-	.	Parent=comp118990_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96282218	96282283	.	-	0	Parent=comp118990_c0_seq1.mrna1
Chr2	gffcl	locus	96282708	96283731	.	+	.	ID=RLOC_00019700;geneIDs=comp158294_c0_seq1.path1;transcripts=comp158294_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96282708	96283731	.	+	.	ID=comp158294_c0_seq1.mrna1;geneID=comp158294_c0_seq1.path1;Name=comp158294_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1024;mismatches=0;indels=0;unknowns=0;Target=comp158294_c0_seq1 1024 1 .;CDS_Target=comp158294_c0_seq1 358 224 .;locus=RLOC_00019700
Chr2	stalkie_big_nohaplotig	exon	96282708	96283731	100	+	.	Parent=comp158294_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96282931	96283065	.	+	0	Parent=comp158294_c0_seq1.mrna1
Chr2	gffcl	locus	96287089	96287734	.	+	.	ID=RLOC_00019701;geneIDs=comp145070_c0_seq1.path1;transcripts=comp145070_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96287089	96287734	.	+	.	ID=comp145070_c0_seq1.mrna1;geneID=comp145070_c0_seq1.path1;Name=comp145070_c0_seq1;Dir=indeterminatecoverage=97.4;identity=97.5;matches=630;mismatches=12;indels=4;unknowns=0;Target=comp145070_c0_seq1 659 18 .;CDS_Target=comp145070_c0_seq1 145 62 .;locus=RLOC_00019701
Chr2	stalkie_big_nohaplotig	exon	96287089	96287734	97	+	.	Parent=comp145070_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96287133	96287216	.	+	0	Parent=comp145070_c0_seq1.mrna1
Chr2	gffcl	locus	96288445	96289421	.	+	.	ID=RLOC_00019702;geneIDs=FBgn0038211.5.path1,FBgn0083956.1.path1;transcripts=FBgn0038211.5.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96288445	96289421	.	+	.	ID=FBgn0038211.5.mrna1;geneID=FBgn0038211.5.path1;Name=FBgn0038211.5;Dir=sensecoverage=100.0;identity=100.0;matches=912;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019702
Chr2	stalkie_big_nohaplotig	exon	96288445	96288938	100	+	.	Parent=FBgn0038211.5.mrna1;Target=FBgn0038211.5 1 494 +
Chr2	stalkie_big_nohaplotig	exon	96289004	96289421	100	+	.	Parent=FBgn0038211.5.mrna1;Target=FBgn0038211.5 495 912 +
Chr2	stalkie_big_nohaplotig	CDS	96288445	96288938	.	+	0	Parent=FBgn0038211.5.mrna1;Target=FBgn0038211.5 1 494 +
Chr2	stalkie_big_nohaplotig	CDS	96289004	96289421	.	+	1	Parent=FBgn0038211.5.mrna1;Target=FBgn0038211.5 495 912 +
Chr2	gffcl	locus	96386333	96402597	.	-	.	ID=RLOC_00019706;geneIDs=FBgn0031261.2.path1,Dp_FBgn0071272.path1;transcripts=Dp_FBgn0071272.mrna1,FBgn0031261.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96386333	96394929	.	-	.	ID=Dp_FBgn0071272.mrna1;geneID=Dp_FBgn0071272.path1;Name=Dp_FBgn0071272;Dir=sensecoverage=100.0;identity=99.6;matches=251;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019706
Chr2	stalkie_big_nohaplotig	exon	96386333	96386548	100	-	.	Parent=Dp_FBgn0071272.mrna1;Target=Dp_FBgn0071272 37 252 +
Chr2	stalkie_big_nohaplotig	exon	96394894	96394929	97	-	.	Parent=Dp_FBgn0071272.mrna1;Target=Dp_FBgn0071272 1 36 +
Chr2	stalkie_big_nohaplotig	CDS	96386333	96386548	.	-	0	Parent=Dp_FBgn0071272.mrna1;Target=Dp_FBgn0071272 37 252 +
Chr2	stalkie_big_nohaplotig	CDS	96394894	96394929	.	-	0	Parent=Dp_FBgn0071272.mrna1;Target=Dp_FBgn0071272 1 36 +
Chr2	stalkie_big_nohaplotig	mRNA	96390551	96402597	.	-	.	ID=FBgn0031261.2.mrna1;geneID=FBgn0031261.2.path1;Name=FBgn0031261.2;Dir=sensecoverage=100.0;identity=99.9;matches=1357;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019706
Chr2	stalkie_big_nohaplotig	exon	96390551	96390945	100	-	.	Parent=FBgn0031261.2.mrna1;Target=FBgn0031261.2 965 1359 +
Chr2	stalkie_big_nohaplotig	exon	96391002	96391629	100	-	.	Parent=FBgn0031261.2.mrna1;Target=FBgn0031261.2 337 964 +
Chr2	stalkie_big_nohaplotig	exon	96394894	96395087	100	-	.	Parent=FBgn0031261.2.mrna1;Target=FBgn0031261.2 143 336 +
Chr2	stalkie_big_nohaplotig	exon	96402456	96402597	98	-	.	Parent=FBgn0031261.2.mrna1;Target=FBgn0031261.2 1 142 +
Chr2	stalkie_big_nohaplotig	CDS	96390551	96390945	.	-	2	Parent=FBgn0031261.2.mrna1;Target=FBgn0031261.2 965 1359 +
Chr2	stalkie_big_nohaplotig	CDS	96391002	96391629	.	-	0	Parent=FBgn0031261.2.mrna1;Target=FBgn0031261.2 337 964 +
Chr2	stalkie_big_nohaplotig	CDS	96394894	96395087	.	-	2	Parent=FBgn0031261.2.mrna1;Target=FBgn0031261.2 143 336 +
Chr2	stalkie_big_nohaplotig	CDS	96402456	96402597	.	-	0	Parent=FBgn0031261.2.mrna1;Target=FBgn0031261.2 1 142 +
Chr2	gffcl	locus	96448119	96449276	.	-	.	ID=RLOC_00019707;geneIDs=FBgn0038772.1.path1;transcripts=FBgn0038772.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96448119	96449276	.	-	.	ID=FBgn0038772.1.mrna1;geneID=FBgn0038772.1.path1;Name=FBgn0038772.1;Dir=sensecoverage=100.0;identity=100.0;matches=1038;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019707
Chr2	stalkie_big_nohaplotig	exon	96448119	96448296	100	-	.	Parent=FBgn0038772.1.mrna1;Target=FBgn0038772.1 861 1038 +
Chr2	stalkie_big_nohaplotig	exon	96448353	96449067	100	-	.	Parent=FBgn0038772.1.mrna1;Target=FBgn0038772.1 146 860 +
Chr2	stalkie_big_nohaplotig	exon	96449132	96449276	100	-	.	Parent=FBgn0038772.1.mrna1;Target=FBgn0038772.1 1 145 +
Chr2	stalkie_big_nohaplotig	CDS	96448119	96448296	.	-	1	Parent=FBgn0038772.1.mrna1;Target=FBgn0038772.1 861 1038 +
Chr2	stalkie_big_nohaplotig	CDS	96448353	96449067	.	-	2	Parent=FBgn0038772.1.mrna1;Target=FBgn0038772.1 146 860 +
Chr2	stalkie_big_nohaplotig	CDS	96449132	96449276	.	-	0	Parent=FBgn0038772.1.mrna1;Target=FBgn0038772.1 1 145 +
Chr2	gffcl	locus	96451012	96451976	.	+	.	ID=RLOC_00019708;geneIDs=FBgn0038771.1.path1;transcripts=FBgn0038771.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96451012	96451976	.	+	.	ID=FBgn0038771.1.mrna1;geneID=FBgn0038771.1.path1;Name=FBgn0038771.1;Dir=sensecoverage=100.0;identity=99.9;matches=902;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019708
Chr2	stalkie_big_nohaplotig	exon	96451012	96451130	99	+	.	Parent=FBgn0038771.1.mrna1;Target=FBgn0038771.1 1 119 +
Chr2	stalkie_big_nohaplotig	exon	96451193	96451976	100	+	.	Parent=FBgn0038771.1.mrna1;Target=FBgn0038771.1 120 903 +
Chr2	stalkie_big_nohaplotig	CDS	96451012	96451130	.	+	0	Parent=FBgn0038771.1.mrna1;Target=FBgn0038771.1 1 119 +
Chr2	stalkie_big_nohaplotig	CDS	96451193	96451976	.	+	1	Parent=FBgn0038771.1.mrna1;Target=FBgn0038771.1 120 903 +
Chr2	gffcl	locus	96491837	98369891	.	.	.	ID=RLOC_00019709;geneIDs=FBgn0053812.1.path3,comp161940_c0_seq1.path1;transcripts=comp161940_c0_seq1.mrna1,FBgn0053812.1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	96491837	98369891	.	-	.	ID=comp161940_c0_seq1.mrna1;geneID=comp161940_c0_seq1.path1;Name=comp161940_c0_seq1;Dir=indeterminatecoverage=76.4;identity=99.5;matches=2952;mismatches=7;indels=8;unknowns=0;Target=comp161940_c0_seq1 2299 2105 .;locus=RLOC_00019709
Chr2	stalkie_big_nohaplotig	exon	96491837	96491846	100	-	.	Parent=comp161940_c0_seq1.mrna1;Target=comp161940_c0_seq1 3786 3777 .
Chr2	stalkie_big_nohaplotig	exon	96499607	96499614	100	-	.	Parent=comp161940_c0_seq1.mrna1;Target=comp161940_c0_seq1 3773 3766 .
Chr2	stalkie_big_nohaplotig	exon	96512646	96512650	100	-	.	Parent=comp161940_c0_seq1.mrna1;Target=comp161940_c0_seq1 3765 3761 .
Chr2	stalkie_big_nohaplotig	exon	96516069	96516074	100	-	.	Parent=comp161940_c0_seq1.mrna1;Target=comp161940_c0_seq1 3760 3755 .
Chr2	stalkie_big_nohaplotig	exon	96522172	96522176	100	-	.	Parent=comp161940_c0_seq1.mrna1;Target=comp161940_c0_seq1 3754 3750 .
Chr2	stalkie_big_nohaplotig	exon	96522222	96522229	100	-	.	Parent=comp161940_c0_seq1.mrna1;Target=comp161940_c0_seq1 3703 3696 .
Chr2	stalkie_big_nohaplotig	exon	96524447	96524455	100	-	.	Parent=comp161940_c0_seq1.mrna1;Target=comp161940_c0_seq1 3680 3672 .
Chr2	stalkie_big_nohaplotig	exon	96524693	96524715	65	-	.	Parent=comp161940_c0_seq1.mrna1;Target=comp161940_c0_seq1 3665 3651 .
Chr2	stalkie_big_nohaplotig	exon	96531144	96531152	100	-	.	Parent=comp161940_c0_seq1.mrna1;Target=comp161940_c0_seq1 3650 3642 .
Chr2	stalkie_big_nohaplotig	exon	96539911	96539924	100	-	.	Parent=comp161940_c0_seq1.mrna1;Target=comp161940_c0_seq1 3633 3620 .
Chr2	stalkie_big_nohaplotig	exon	96554124	96554131	100	-	.	Parent=comp161940_c0_seq1.mrna1;Target=comp161940_c0_seq1 3559 3552 .
Chr2	stalkie_big_nohaplotig	exon	96554134	96554142	100	-	.	Parent=comp161940_c0_seq1.mrna1;Target=comp161940_c0_seq1 3530 3522 .
Chr2	stalkie_big_nohaplotig	exon	96558677	96558681	100	-	.	Parent=comp161940_c0_seq1.mrna1;Target=comp161940_c0_seq1 3521 3517 .
Chr2	stalkie_big_nohaplotig	exon	96589316	96589319	100	-	.	Parent=comp161940_c0_seq1.mrna1;Target=comp161940_c0_seq1 3516 3513 .
Chr2	stalkie_big_nohaplotig	exon	96603243	96603246	100	-	.	Parent=comp161940_c0_seq1.mrna1;Target=comp161940_c0_seq1 3512 3509 .
Chr2	stalkie_big_nohaplotig	exon	96606364	96606365	100	-	.	Parent=comp161940_c0_seq1.mrna1;Target=comp161940_c0_seq1 3508 3507 .
Chr2	stalkie_big_nohaplotig	exon	96606378	96606386	100	-	.	Parent=comp161940_c0_seq1.mrna1;Target=comp161940_c0_seq1 3496 3488 .
Chr2	stalkie_big_nohaplotig	exon	98343148	98343175	96	-	.	Parent=comp161940_c0_seq1.mrna1;Target=comp161940_c0_seq1 3487 3460 .
Chr2	stalkie_big_nohaplotig	exon	98343325	98343889	98	-	.	Parent=comp161940_c0_seq1.mrna1;Target=comp161940_c0_seq1 3459 2895 .
Chr2	stalkie_big_nohaplotig	exon	98365164	98365439	100	-	.	Parent=comp161940_c0_seq1.mrna1;Target=comp161940_c0_seq1 2894 2619 .
Chr2	stalkie_big_nohaplotig	exon	98367590	98369346	100	-	.	Parent=comp161940_c0_seq1.mrna1;Target=comp161940_c0_seq1 2618 862 .
Chr2	stalkie_big_nohaplotig	exon	98369692	98369891	100	-	.	Parent=comp161940_c0_seq1.mrna1;Target=comp161940_c0_seq1 861 662 .
Chr2	stalkie_big_nohaplotig	CDS	98367909	98368103	.	-	0	Parent=comp161940_c0_seq1.mrna1
Chr2	gffcl	locus	96497581	96497888	.	-	.	ID=RLOC_00019710;geneIDs=comp71541_c0_seq1.path1;transcripts=comp71541_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96497581	96497888	.	-	.	ID=comp71541_c0_seq1.mrna1;geneID=comp71541_c0_seq1.path1;Name=comp71541_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=308;mismatches=0;indels=0;unknowns=0;Target=comp71541_c0_seq1 308 1 .;CDS_Target=comp71541_c0_seq1 256 170 .;locus=RLOC_00019710
Chr2	stalkie_big_nohaplotig	exon	96497581	96497888	100	-	.	Parent=comp71541_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96497633	96497719	.	-	0	Parent=comp71541_c0_seq1.mrna1
Chr2	gffcl	locus	96500867	96501060	.	-	.	ID=RLOC_00019711;geneIDs=comp454686_c0_seq1.path1;transcripts=comp454686_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96500867	96501060	.	-	.	ID=comp454686_c0_seq1.mrna1;geneID=comp454686_c0_seq1.path1;Name=comp454686_c0_seq1;Dir=indeterminatecoverage=94.6;identity=100.0;matches=194;mismatches=0;indels=0;unknowns=0;Target=comp454686_c0_seq1 205 12 .;CDS_Target=comp454686_c0_seq1 47 12 .;locus=RLOC_00019711
Chr2	stalkie_big_nohaplotig	exon	96500867	96501060	100	-	.	Parent=comp454686_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96501025	96501060	.	-	0	Parent=comp454686_c0_seq1.mrna1
Chr2	gffcl	locus	96547791	96548514	.	-	.	ID=RLOC_00019713;geneIDs=comp135046_c0_seq1.path1;transcripts=comp135046_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96547791	96548514	.	-	.	ID=comp135046_c0_seq1.mrna1;geneID=comp135046_c0_seq1.path1;Name=comp135046_c0_seq1;Dir=sensecoverage=97.5;identity=98.8;matches=573;mismatches=7;indels=0;unknowns=0;locus=RLOC_00019713
Chr2	stalkie_big_nohaplotig	exon	96547791	96548268	98	-	.	Parent=comp135046_c0_seq1.mrna1;Target=comp135046_c0_seq1 118 595 +
Chr2	stalkie_big_nohaplotig	exon	96548413	96548514	99	-	.	Parent=comp135046_c0_seq1.mrna1;Target=comp135046_c0_seq1 16 117 +
Chr2	stalkie_big_nohaplotig	CDS	96547954	96548268	.	-	0	Parent=comp135046_c0_seq1.mrna1;Target=comp135046_c0_seq1 118 432 +
Chr2	stalkie_big_nohaplotig	CDS	96548413	96548514	.	-	0	Parent=comp135046_c0_seq1.mrna1;Target=comp135046_c0_seq1 16 117 +
Chr2	gffcl	locus	96572600	96572986	.	+	.	ID=RLOC_00019715;geneIDs=FBgn0053817.2.path4;transcripts=FBgn0053817.2.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	96572600	96572986	.	+	.	ID=FBgn0053817.2.mrna4;geneID=FBgn0053817.2.path4;Name=FBgn0053817.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=387;mismatches=0;indels=0;unknowns=0;Target=FBgn0053817.2 387 1 .;locus=RLOC_00019715
Chr2	stalkie_big_nohaplotig	exon	96572600	96572986	100	+	.	Parent=FBgn0053817.2.mrna4
Chr2	stalkie_big_nohaplotig	CDS	96572600	96572986	.	+	0	Parent=FBgn0053817.2.mrna4
Chr2	gffcl	locus	96576552	96576937	.	-	.	ID=RLOC_00019716;geneIDs=FBgn0053870.2.path4;transcripts=FBgn0053870.2.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	96576552	96576937	.	-	.	ID=FBgn0053870.2.mrna4;geneID=FBgn0053870.2.path4;Name=FBgn0053870.2;Dir=indeterminatecoverage=99.7;identity=100.0;matches=386;mismatches=0;indels=0;unknowns=0;Target=FBgn0053870.2 387 2 .;CDS_Target=FBgn0053870.2 387 4 .;locus=RLOC_00019716
Chr2	stalkie_big_nohaplotig	exon	96576552	96576937	100	-	.	Parent=FBgn0053870.2.mrna4
Chr2	stalkie_big_nohaplotig	CDS	96576552	96576935	.	-	0	Parent=FBgn0053870.2.mrna4
Chr2	gffcl	locus	96582791	96583177	.	+	.	ID=RLOC_00019717;geneIDs=FBgn0053817.2.path5;transcripts=FBgn0053817.2.mrna5
Chr2	stalkie_big_nohaplotig	mRNA	96582791	96583177	.	+	.	ID=FBgn0053817.2.mrna5;geneID=FBgn0053817.2.path5;Name=FBgn0053817.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=387;mismatches=0;indels=0;unknowns=0;Target=FBgn0053817.2 387 1 .;locus=RLOC_00019717
Chr2	stalkie_big_nohaplotig	exon	96582791	96583177	100	+	.	Parent=FBgn0053817.2.mrna5
Chr2	stalkie_big_nohaplotig	CDS	96582791	96583177	.	+	0	Parent=FBgn0053817.2.mrna5
Chr2	gffcl	locus	96590691	96591076	.	-	.	ID=RLOC_00019718;geneIDs=FBgn0053870.2.path5;transcripts=FBgn0053870.2.mrna5
Chr2	stalkie_big_nohaplotig	mRNA	96590691	96591076	.	-	.	ID=FBgn0053870.2.mrna5;geneID=FBgn0053870.2.path5;Name=FBgn0053870.2;Dir=indeterminatecoverage=99.7;identity=100.0;matches=386;mismatches=0;indels=0;unknowns=0;Target=FBgn0053870.2 387 2 .;CDS_Target=FBgn0053870.2 387 4 .;locus=RLOC_00019718
Chr2	stalkie_big_nohaplotig	exon	96590691	96591076	100	-	.	Parent=FBgn0053870.2.mrna5
Chr2	stalkie_big_nohaplotig	CDS	96590691	96591074	.	-	0	Parent=FBgn0053870.2.mrna5
Chr2	gffcl	locus	96613481	96614745	.	-	.	ID=RLOC_00019719;geneIDs=FBgn0038766.1.path1;transcripts=FBgn0038766.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96613481	96614745	.	-	.	ID=FBgn0038766.1.mrna1;geneID=FBgn0038766.1.path1;Name=FBgn0038766.1;Dir=sensecoverage=100.0;identity=99.5;matches=1016;mismatches=5;indels=0;unknowns=2;locus=RLOC_00019719
Chr2	stalkie_big_nohaplotig	exon	96613481	96613583	100	-	.	Parent=FBgn0038766.1.mrna1;Target=FBgn0038766.1 921 1023 +
Chr2	stalkie_big_nohaplotig	exon	96613640	96613750	100	-	.	Parent=FBgn0038766.1.mrna1;Target=FBgn0038766.1 810 920 +
Chr2	stalkie_big_nohaplotig	exon	96613831	96613965	99	-	.	Parent=FBgn0038766.1.mrna1;Target=FBgn0038766.1 675 809 +
Chr2	stalkie_big_nohaplotig	exon	96614021	96614427	99	-	.	Parent=FBgn0038766.1.mrna1;Target=FBgn0038766.1 268 674 +
Chr2	stalkie_big_nohaplotig	exon	96614479	96614745	98	-	.	Parent=FBgn0038766.1.mrna1;Target=FBgn0038766.1 1 267 +
Chr2	stalkie_big_nohaplotig	CDS	96613481	96613583	.	-	1	Parent=FBgn0038766.1.mrna1;Target=FBgn0038766.1 921 1023 +
Chr2	stalkie_big_nohaplotig	CDS	96613640	96613750	.	-	1	Parent=FBgn0038766.1.mrna1;Target=FBgn0038766.1 810 920 +
Chr2	stalkie_big_nohaplotig	CDS	96613831	96613965	.	-	1	Parent=FBgn0038766.1.mrna1;Target=FBgn0038766.1 675 809 +
Chr2	stalkie_big_nohaplotig	CDS	96614021	96614427	.	-	0	Parent=FBgn0038766.1.mrna1;Target=FBgn0038766.1 268 674 +
Chr2	stalkie_big_nohaplotig	CDS	96614479	96614745	.	-	0	Parent=FBgn0038766.1.mrna1;Target=FBgn0038766.1 1 267 +
Chr2	gffcl	locus	96616532	96617988	.	+	.	ID=RLOC_00019720;geneIDs=FBgn0038765.1.path1;transcripts=FBgn0038765.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96616532	96617988	.	+	.	ID=FBgn0038765.1.mrna1;geneID=FBgn0038765.1.path1;Name=FBgn0038765.1;Dir=sensecoverage=96.1;identity=99.8;matches=1202;mismatches=3;indels=0;unknowns=0;locus=RLOC_00019720
Chr2	stalkie_big_nohaplotig	exon	96616532	96616713	100	+	.	Parent=FBgn0038765.1.mrna1;Target=FBgn0038765.1 50 231 +
Chr2	stalkie_big_nohaplotig	exon	96616771	96617345	99	+	.	Parent=FBgn0038765.1.mrna1;Target=FBgn0038765.1 232 806 +
Chr2	stalkie_big_nohaplotig	exon	96617408	96617542	100	+	.	Parent=FBgn0038765.1.mrna1;Target=FBgn0038765.1 807 941 +
Chr2	stalkie_big_nohaplotig	exon	96617606	96617716	100	+	.	Parent=FBgn0038765.1.mrna1;Target=FBgn0038765.1 942 1052 +
Chr2	stalkie_big_nohaplotig	exon	96617787	96617988	100	+	.	Parent=FBgn0038765.1.mrna1;Target=FBgn0038765.1 1053 1254 +
Chr2	stalkie_big_nohaplotig	CDS	96616534	96616713	.	+	0	Parent=FBgn0038765.1.mrna1;Target=FBgn0038765.1 52 231 +
Chr2	stalkie_big_nohaplotig	CDS	96616771	96617345	.	+	0	Parent=FBgn0038765.1.mrna1;Target=FBgn0038765.1 232 806 +
Chr2	stalkie_big_nohaplotig	CDS	96617408	96617542	.	+	1	Parent=FBgn0038765.1.mrna1;Target=FBgn0038765.1 807 941 +
Chr2	stalkie_big_nohaplotig	CDS	96617606	96617716	.	+	1	Parent=FBgn0038765.1.mrna1;Target=FBgn0038765.1 942 1052 +
Chr2	stalkie_big_nohaplotig	CDS	96617787	96617988	.	+	1	Parent=FBgn0038765.1.mrna1;Target=FBgn0038765.1 1053 1254 +
Chr2	gffcl	locus	96652147	96652726	.	-	.	ID=RLOC_00019722;geneIDs=comp145027_c1_seq1.path1;transcripts=comp145027_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96652147	96652726	.	-	.	ID=comp145027_c1_seq1.mrna1;geneID=comp145027_c1_seq1.path1;Name=comp145027_c1_seq1;Dir=indeterminatecoverage=98.0;identity=100.0;matches=580;mismatches=0;indels=0;unknowns=0;Target=comp145027_c1_seq1 592 13 .;CDS_Target=comp145027_c1_seq1 436 371 .;locus=RLOC_00019722
Chr2	stalkie_big_nohaplotig	exon	96652147	96652726	100	-	.	Parent=comp145027_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96652303	96652368	.	-	0	Parent=comp145027_c1_seq1.mrna1
Chr2	gffcl	locus	96659665	96662840	.	.	.	ID=RLOC_00019723;geneIDs=comp148775_c0_seq1.path1,comp161288_c1_seq1.path1;transcripts=comp161288_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96660597	96662840	.	-	.	ID=comp161288_c1_seq1.mrna1;geneID=comp161288_c1_seq1.path1;Name=comp161288_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=2244;mismatches=0;indels=7;unknowns=0;Target=comp161288_c1_seq1 2251 1 .;CDS_Target=comp161288_c1_seq1 2122 1970 .;locus=RLOC_00019723
Chr2	stalkie_big_nohaplotig	exon	96660597	96662840	99	-	.	Parent=comp161288_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96660726	96660878	.	-	0	Parent=comp161288_c1_seq1.mrna1
Chr2	gffcl	locus	96664228	96664651	.	-	.	ID=RLOC_00019724;geneIDs=comp115191_c0_seq1.path1;transcripts=comp115191_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96664228	96664651	.	-	.	ID=comp115191_c0_seq1.mrna1;geneID=comp115191_c0_seq1.path1;Name=comp115191_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=424;mismatches=0;indels=0;unknowns=0;Target=comp115191_c0_seq1 425 2 .;CDS_Target=comp115191_c0_seq1 217 113 .;locus=RLOC_00019724
Chr2	stalkie_big_nohaplotig	exon	96664228	96664651	100	-	.	Parent=comp115191_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96664436	96664540	.	-	0	Parent=comp115191_c0_seq1.mrna1
Chr2	gffcl	locus	96729239	96743754	.	+	.	ID=RLOC_00019725;geneIDs=FBgn0051216.1.path1;transcripts=FBgn0051216.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96729239	96743754	.	+	.	ID=FBgn0051216.1.mrna1;geneID=FBgn0051216.1.path1;Name=FBgn0051216.1;Dir=sensecoverage=100.0;identity=100.0;matches=1134;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019725
Chr2	stalkie_big_nohaplotig	exon	96729239	96729366	100	+	.	Parent=FBgn0051216.1.mrna1;Target=FBgn0051216.1 1 128 +
Chr2	stalkie_big_nohaplotig	exon	96733183	96733369	100	+	.	Parent=FBgn0051216.1.mrna1;Target=FBgn0051216.1 129 315 +
Chr2	stalkie_big_nohaplotig	exon	96739862	96739966	100	+	.	Parent=FBgn0051216.1.mrna1;Target=FBgn0051216.1 316 420 +
Chr2	stalkie_big_nohaplotig	exon	96740304	96740438	100	+	.	Parent=FBgn0051216.1.mrna1;Target=FBgn0051216.1 421 555 +
Chr2	stalkie_big_nohaplotig	exon	96740515	96740812	100	+	.	Parent=FBgn0051216.1.mrna1;Target=FBgn0051216.1 556 853 +
Chr2	stalkie_big_nohaplotig	exon	96743377	96743519	100	+	.	Parent=FBgn0051216.1.mrna1;Target=FBgn0051216.1 854 996 +
Chr2	stalkie_big_nohaplotig	exon	96743617	96743754	100	+	.	Parent=FBgn0051216.1.mrna1;Target=FBgn0051216.1 997 1134 +
Chr2	stalkie_big_nohaplotig	CDS	96729239	96729366	.	+	0	Parent=FBgn0051216.1.mrna1;Target=FBgn0051216.1 1 128 +
Chr2	stalkie_big_nohaplotig	CDS	96733183	96733369	.	+	1	Parent=FBgn0051216.1.mrna1;Target=FBgn0051216.1 129 315 +
Chr2	stalkie_big_nohaplotig	CDS	96739862	96739966	.	+	0	Parent=FBgn0051216.1.mrna1;Target=FBgn0051216.1 316 420 +
Chr2	stalkie_big_nohaplotig	CDS	96740304	96740438	.	+	0	Parent=FBgn0051216.1.mrna1;Target=FBgn0051216.1 421 555 +
Chr2	stalkie_big_nohaplotig	CDS	96740515	96740812	.	+	0	Parent=FBgn0051216.1.mrna1;Target=FBgn0051216.1 556 853 +
Chr2	stalkie_big_nohaplotig	CDS	96743377	96743519	.	+	2	Parent=FBgn0051216.1.mrna1;Target=FBgn0051216.1 854 996 +
Chr2	stalkie_big_nohaplotig	CDS	96743617	96743754	.	+	0	Parent=FBgn0051216.1.mrna1;Target=FBgn0051216.1 997 1134 +
Chr2	gffcl	locus	96747623	96748393	.	+	.	ID=RLOC_00019726;geneIDs=comp78645_c0_seq1.path1;transcripts=comp78645_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96747623	96748393	.	+	.	ID=comp78645_c0_seq1.mrna1;geneID=comp78645_c0_seq1.path1;Name=comp78645_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=771;mismatches=0;indels=1;unknowns=0;Target=comp78645_c0_seq1 772 1 .;CDS_Target=comp78645_c0_seq1 689 609 .;locus=RLOC_00019726
Chr2	stalkie_big_nohaplotig	exon	96747623	96748393	99	+	.	Parent=comp78645_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96748231	96748310	.	+	0	Parent=comp78645_c0_seq1.mrna1
Chr2	gffcl	locus	96800658	96877318	.	.	.	ID=RLOC_00019727;geneIDs=FBgn0024963.1.path1,comp153132_c0_seq1.path1,comp163474_c2_seq1.path1;transcripts=comp163474_c2_seq1.mrna1,FBgn0024963.1.mrna1,comp153132_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96800658	96877318	.	+	.	ID=comp163474_c2_seq1.mrna1;geneID=comp163474_c2_seq1.path1;Name=comp163474_c2_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=4329;mismatches=6;indels=21;unknowns=0;locus=RLOC_00019727
Chr2	stalkie_big_nohaplotig	exon	96800658	96801260	99	+	.	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 1 604 +
Chr2	stalkie_big_nohaplotig	exon	96809131	96809532	99	+	.	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 605 1006 +
Chr2	stalkie_big_nohaplotig	exon	96836930	96837027	100	+	.	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 1007 1104 +
Chr2	stalkie_big_nohaplotig	exon	96838970	96839082	100	+	.	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 1105 1217 +
Chr2	stalkie_big_nohaplotig	exon	96850174	96850244	100	+	.	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 1218 1288 +
Chr2	stalkie_big_nohaplotig	exon	96857921	96857990	100	+	.	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 1289 1358 +
Chr2	stalkie_big_nohaplotig	exon	96858204	96858440	100	+	.	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 1359 1595 +
Chr2	stalkie_big_nohaplotig	exon	96859978	96860112	100	+	.	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 1596 1730 +
Chr2	stalkie_big_nohaplotig	exon	96864791	96864943	100	+	.	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 1731 1883 +
Chr2	stalkie_big_nohaplotig	exon	96867847	96868026	100	+	.	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 1884 2063 +
Chr2	stalkie_big_nohaplotig	exon	96869490	96869596	99	+	.	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 2064 2170 +
Chr2	stalkie_big_nohaplotig	exon	96871667	96871791	100	+	.	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 2171 2295 +
Chr2	stalkie_big_nohaplotig	exon	96874987	96875091	100	+	.	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 2296 2400 +
Chr2	stalkie_big_nohaplotig	exon	96875366	96877318	98	+	.	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 2401 4339 +
Chr2	stalkie_big_nohaplotig	CDS	96836966	96837027	.	+	0	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 1043 1104 +
Chr2	stalkie_big_nohaplotig	CDS	96838970	96839082	.	+	1	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 1105 1217 +
Chr2	stalkie_big_nohaplotig	CDS	96850174	96850244	.	+	2	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 1218 1288 +
Chr2	stalkie_big_nohaplotig	CDS	96857921	96857990	.	+	0	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 1289 1358 +
Chr2	stalkie_big_nohaplotig	CDS	96858204	96858440	.	+	2	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 1359 1595 +
Chr2	stalkie_big_nohaplotig	CDS	96859978	96860112	.	+	2	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 1596 1730 +
Chr2	stalkie_big_nohaplotig	CDS	96864791	96864943	.	+	2	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 1731 1883 +
Chr2	stalkie_big_nohaplotig	CDS	96867847	96868026	.	+	2	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 1884 2063 +
Chr2	stalkie_big_nohaplotig	CDS	96869490	96869596	.	+	2	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 2064 2170 +
Chr2	stalkie_big_nohaplotig	CDS	96871667	96871791	.	+	0	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 2171 2295 +
Chr2	stalkie_big_nohaplotig	CDS	96874987	96875091	.	+	1	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 2296 2400 +
Chr2	stalkie_big_nohaplotig	CDS	96875366	96875375	.	+	1	Parent=comp163474_c2_seq1.mrna1;Target=comp163474_c2_seq1 2401 2410 +
Chr2	stalkie_big_nohaplotig	mRNA	96836963	96875092	.	+	.	ID=FBgn0024963.1.mrna1;geneID=FBgn0024963.1.path1;Name=FBgn0024963.1;Dir=sensecoverage=99.6;identity=99.9;matches=1358;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019727
Chr2	stalkie_big_nohaplotig	exon	96836963	96837027	100	+	.	Parent=FBgn0024963.1.mrna1;Target=FBgn0024963.1 1 65 +
Chr2	stalkie_big_nohaplotig	exon	96838970	96839082	100	+	.	Parent=FBgn0024963.1.mrna1;Target=FBgn0024963.1 66 178 +
Chr2	stalkie_big_nohaplotig	exon	96839785	96839852	100	+	.	Parent=FBgn0024963.1.mrna1;Target=FBgn0024963.1 179 246 +
Chr2	stalkie_big_nohaplotig	exon	96857921	96857990	100	+	.	Parent=FBgn0024963.1.mrna1;Target=FBgn0024963.1 247 316 +
Chr2	stalkie_big_nohaplotig	exon	96858204	96858440	100	+	.	Parent=FBgn0024963.1.mrna1;Target=FBgn0024963.1 317 553 +
Chr2	stalkie_big_nohaplotig	exon	96859978	96860112	100	+	.	Parent=FBgn0024963.1.mrna1;Target=FBgn0024963.1 554 688 +
Chr2	stalkie_big_nohaplotig	exon	96864791	96864943	100	+	.	Parent=FBgn0024963.1.mrna1;Target=FBgn0024963.1 689 841 +
Chr2	stalkie_big_nohaplotig	exon	96867847	96868026	100	+	.	Parent=FBgn0024963.1.mrna1;Target=FBgn0024963.1 842 1021 +
Chr2	stalkie_big_nohaplotig	exon	96869490	96869596	99	+	.	Parent=FBgn0024963.1.mrna1;Target=FBgn0024963.1 1022 1128 +
Chr2	stalkie_big_nohaplotig	exon	96871667	96871791	100	+	.	Parent=FBgn0024963.1.mrna1;Target=FBgn0024963.1 1129 1253 +
Chr2	stalkie_big_nohaplotig	exon	96874987	96875092	100	+	.	Parent=FBgn0024963.1.mrna1;Target=FBgn0024963.1 1254 1359 +
Chr2	stalkie_big_nohaplotig	CDS	96836963	96837027	.	+	0	Parent=FBgn0024963.1.mrna1;Target=FBgn0024963.1 1 65 +
Chr2	stalkie_big_nohaplotig	CDS	96838970	96839082	.	+	1	Parent=FBgn0024963.1.mrna1;Target=FBgn0024963.1 66 178 +
Chr2	stalkie_big_nohaplotig	CDS	96839785	96839852	.	+	2	Parent=FBgn0024963.1.mrna1;Target=FBgn0024963.1 179 246 +
Chr2	stalkie_big_nohaplotig	CDS	96857921	96857990	.	+	0	Parent=FBgn0024963.1.mrna1;Target=FBgn0024963.1 247 316 +
Chr2	stalkie_big_nohaplotig	CDS	96858204	96858440	.	+	2	Parent=FBgn0024963.1.mrna1;Target=FBgn0024963.1 317 553 +
Chr2	stalkie_big_nohaplotig	CDS	96859978	96860112	.	+	2	Parent=FBgn0024963.1.mrna1;Target=FBgn0024963.1 554 688 +
Chr2	stalkie_big_nohaplotig	CDS	96864791	96864943	.	+	2	Parent=FBgn0024963.1.mrna1;Target=FBgn0024963.1 689 841 +
Chr2	stalkie_big_nohaplotig	CDS	96867847	96868026	.	+	2	Parent=FBgn0024963.1.mrna1;Target=FBgn0024963.1 842 1021 +
Chr2	stalkie_big_nohaplotig	CDS	96869490	96869596	.	+	2	Parent=FBgn0024963.1.mrna1;Target=FBgn0024963.1 1022 1128 +
Chr2	stalkie_big_nohaplotig	CDS	96871667	96871791	.	+	0	Parent=FBgn0024963.1.mrna1;Target=FBgn0024963.1 1129 1253 +
Chr2	stalkie_big_nohaplotig	CDS	96874987	96875092	.	+	1	Parent=FBgn0024963.1.mrna1;Target=FBgn0024963.1 1254 1359 +
Chr2	stalkie_big_nohaplotig	mRNA	96868003	96868768	.	-	.	ID=comp153132_c0_seq1.mrna1;geneID=comp153132_c0_seq1.path1;Name=comp153132_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.9;matches=765;mismatches=1;indels=0;unknowns=0;Target=comp153132_c0_seq1 768 3 .;CDS_Target=comp153132_c0_seq1 684 529 .;locus=RLOC_00019727
Chr2	stalkie_big_nohaplotig	exon	96868003	96868768	99	-	.	Parent=comp153132_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96868087	96868242	.	-	0	Parent=comp153132_c0_seq1.mrna1
Chr2	gffcl	locus	96831928	96832829	.	-	.	ID=RLOC_00019728;geneIDs=FBgn0002607.1.path1;transcripts=FBgn0002607.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96831928	96832829	.	-	.	ID=FBgn0002607.1.mrna1;geneID=FBgn0002607.1.path1;Name=FBgn0002607.1;Dir=sensecoverage=100.0;identity=99.3;matches=682;mismatches=5;indels=0;unknowns=0;locus=RLOC_00019728
Chr2	stalkie_big_nohaplotig	exon	96831928	96832424	99	-	.	Parent=FBgn0002607.1.mrna1;Target=FBgn0002607.1 191 687 +
Chr2	stalkie_big_nohaplotig	exon	96832559	96832662	100	-	.	Parent=FBgn0002607.1.mrna1;Target=FBgn0002607.1 87 190 +
Chr2	stalkie_big_nohaplotig	exon	96832744	96832829	98	-	.	Parent=FBgn0002607.1.mrna1;Target=FBgn0002607.1 1 86 +
Chr2	stalkie_big_nohaplotig	CDS	96831928	96832424	.	-	2	Parent=FBgn0002607.1.mrna1;Target=FBgn0002607.1 191 687 +
Chr2	stalkie_big_nohaplotig	CDS	96832559	96832662	.	-	1	Parent=FBgn0002607.1.mrna1;Target=FBgn0002607.1 87 190 +
Chr2	stalkie_big_nohaplotig	CDS	96832744	96832748	.	-	0	Parent=FBgn0002607.1.mrna1;Target=FBgn0002607.1 82 86 +
Chr2	gffcl	locus	96860798	96861889	.	+	.	ID=RLOC_00019729;geneIDs=comp153996_c0_seq1.path1;transcripts=comp153996_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96860798	96861889	.	+	.	ID=comp153996_c0_seq1.mrna1;geneID=comp153996_c0_seq1.path1;Name=comp153996_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1091;mismatches=0;indels=1;unknowns=0;Target=comp153996_c0_seq1 1091 1 .;CDS_Target=comp153996_c0_seq1 410 273 .;locus=RLOC_00019729
Chr2	stalkie_big_nohaplotig	exon	96860798	96861889	99	+	.	Parent=comp153996_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96861070	96861207	.	+	0	Parent=comp153996_c0_seq1.mrna1
Chr2	gffcl	locus	96862231	96862826	.	-	.	ID=RLOC_00019730;geneIDs=comp154694_c0_seq1.path1;transcripts=comp154694_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96862231	96862826	.	-	.	ID=comp154694_c0_seq1.mrna1;geneID=comp154694_c0_seq1.path1;Name=comp154694_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.9;matches=583;mismatches=8;indels=17;unknowns=0;Target=comp154694_c0_seq1 603 1 .;CDS_Target=comp154694_c0_seq1 555 421 .;locus=RLOC_00019730
Chr2	stalkie_big_nohaplotig	exon	96862231	96862826	95	-	.	Parent=comp154694_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96862284	96862408	.	-	0	Parent=comp154694_c0_seq1.mrna1
Chr2	gffcl	locus	96870738	96871194	.	+	.	ID=RLOC_00019731;geneIDs=comp156313_c0_seq1.path2;transcripts=comp156313_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	96870738	96871194	.	+	.	ID=comp156313_c0_seq1.mrna2;geneID=comp156313_c0_seq1.path2;Name=comp156313_c0_seq1;Dir=indeterminatecoverage=32.0;identity=99.3;matches=456;mismatches=1;indels=2;unknowns=0;Target=comp156313_c0_seq1 1435 977 .;locus=RLOC_00019731
Chr2	stalkie_big_nohaplotig	exon	96870738	96871194	99	+	.	Parent=comp156313_c0_seq1.mrna2
Chr2	gffcl	locus	96872285	96874042	.	-	.	ID=RLOC_00019732;geneIDs=comp158748_c0_seq1.path1;transcripts=comp158748_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96872285	96874042	.	-	.	ID=comp158748_c0_seq1.mrna1;geneID=comp158748_c0_seq1.path1;Name=comp158748_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1739;mismatches=18;indels=3;unknowns=0;Target=comp158748_c0_seq1 1759 1 .;CDS_Target=comp158748_c0_seq1 1521 1366 .;locus=RLOC_00019732
Chr2	stalkie_big_nohaplotig	exon	96872285	96874042	98	-	.	Parent=comp158748_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96872523	96872678	.	-	0	Parent=comp158748_c0_seq1.mrna1
Chr2	gffcl	locus	96878363	96878718	.	+	.	ID=RLOC_00019733;geneIDs=comp147661_c0_seq1.path1;transcripts=comp147661_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96878363	96878718	.	+	.	ID=comp147661_c0_seq1.mrna1;geneID=comp147661_c0_seq1.path1;Name=comp147661_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=353;mismatches=3;indels=0;unknowns=0;Target=comp147661_c0_seq1 356 1 .;CDS_Target=comp147661_c0_seq1 121 2 .;locus=RLOC_00019733
Chr2	stalkie_big_nohaplotig	exon	96878363	96878718	99	+	.	Parent=comp147661_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96878364	96878483	.	+	0	Parent=comp147661_c0_seq1.mrna1
Chr2	gffcl	locus	96879626	96880241	.	+	.	ID=RLOC_00019734;geneIDs=comp154388_c0_seq1.path1;transcripts=comp154388_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96879626	96880241	.	+	.	ID=comp154388_c0_seq1.mrna1;geneID=comp154388_c0_seq1.path1;Name=comp154388_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=614;mismatches=2;indels=0;unknowns=0;Target=comp154388_c0_seq1 616 1 .;CDS_Target=comp154388_c0_seq1 535 437 .;locus=RLOC_00019734
Chr2	stalkie_big_nohaplotig	exon	96879626	96880241	99	+	.	Parent=comp154388_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96880062	96880160	.	+	0	Parent=comp154388_c0_seq1.mrna1
Chr2	gffcl	locus	96880485	96881681	.	-	.	ID=RLOC_00019735;geneIDs=comp151179_c0_seq1.path1;transcripts=comp151179_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96880485	96881681	.	-	.	ID=comp151179_c0_seq1.mrna1;geneID=comp151179_c0_seq1.path1;Name=comp151179_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.9;matches=1196;mismatches=1;indels=0;unknowns=0;Target=comp151179_c0_seq1 1197 1 .;CDS_Target=comp151179_c0_seq1 71 3 .;locus=RLOC_00019735
Chr2	stalkie_big_nohaplotig	exon	96880485	96881681	99	-	.	Parent=comp151179_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96881611	96881679	.	-	0	Parent=comp151179_c0_seq1.mrna1
Chr2	gffcl	locus	96881904	96883920	.	+	.	ID=RLOC_00019736;geneIDs=comp135245_c0_seq1.path1,comp158931_c0_seq1.path1;transcripts=comp158931_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96882353	96883920	.	+	.	ID=comp158931_c0_seq1.mrna1;geneID=comp158931_c0_seq1.path1;Name=comp158931_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=1488;mismatches=22;indels=17;unknowns=0;Target=comp158931_c0_seq1 922 872 .;locus=RLOC_00019736
Chr2	stalkie_big_nohaplotig	exon	96882353	96883064	96	+	.	Parent=comp158931_c0_seq1.mrna1;Target=comp158931_c0_seq1 721 1 .
Chr2	stalkie_big_nohaplotig	exon	96883122	96883920	97	+	.	Parent=comp158931_c0_seq1.mrna1;Target=comp158931_c0_seq1 1526 722 .
Chr2	stalkie_big_nohaplotig	CDS	96883268	96883317	.	+	0	Parent=comp158931_c0_seq1.mrna1
Chr2	gffcl	locus	96884085	96884908	.	-	.	ID=RLOC_00019737;geneIDs=comp145924_c0_seq1.path1;transcripts=comp145924_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96884085	96884908	.	-	.	ID=comp145924_c0_seq1.mrna1;geneID=comp145924_c0_seq1.path1;Name=comp145924_c0_seq1;Dir=indeterminatecoverage=97.6;identity=99.9;matches=823;mismatches=1;indels=0;unknowns=0;Target=comp145924_c0_seq1 838 15 .;CDS_Target=comp145924_c0_seq1 389 234 .;locus=RLOC_00019737
Chr2	stalkie_big_nohaplotig	exon	96884085	96884908	99	-	.	Parent=comp145924_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96884534	96884689	.	-	0	Parent=comp145924_c0_seq1.mrna1
Chr2	gffcl	locus	96901048	96904489	.	+	.	ID=RLOC_00019738;geneIDs=FBgn0038733.1.path1;transcripts=FBgn0038733.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96901048	96904489	.	+	.	ID=FBgn0038733.1.mrna1;geneID=FBgn0038733.1.path1;Name=FBgn0038733.1;Dir=sensecoverage=100.0;identity=100.0;matches=1698;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019738
Chr2	stalkie_big_nohaplotig	exon	96901048	96901218	100	+	.	Parent=FBgn0038733.1.mrna1;Target=FBgn0038733.1 1 171 +
Chr2	stalkie_big_nohaplotig	exon	96902679	96902886	100	+	.	Parent=FBgn0038733.1.mrna1;Target=FBgn0038733.1 172 379 +
Chr2	stalkie_big_nohaplotig	exon	96902944	96903133	100	+	.	Parent=FBgn0038733.1.mrna1;Target=FBgn0038733.1 380 569 +
Chr2	stalkie_big_nohaplotig	exon	96903302	96903421	100	+	.	Parent=FBgn0038733.1.mrna1;Target=FBgn0038733.1 570 689 +
Chr2	stalkie_big_nohaplotig	exon	96903481	96904489	100	+	.	Parent=FBgn0038733.1.mrna1;Target=FBgn0038733.1 690 1698 +
Chr2	stalkie_big_nohaplotig	CDS	96901048	96901218	.	+	0	Parent=FBgn0038733.1.mrna1;Target=FBgn0038733.1 1 171 +
Chr2	stalkie_big_nohaplotig	CDS	96902679	96902886	.	+	0	Parent=FBgn0038733.1.mrna1;Target=FBgn0038733.1 172 379 +
Chr2	stalkie_big_nohaplotig	CDS	96902944	96903133	.	+	2	Parent=FBgn0038733.1.mrna1;Target=FBgn0038733.1 380 569 +
Chr2	stalkie_big_nohaplotig	CDS	96903302	96903421	.	+	1	Parent=FBgn0038733.1.mrna1;Target=FBgn0038733.1 570 689 +
Chr2	stalkie_big_nohaplotig	CDS	96903481	96904489	.	+	1	Parent=FBgn0038733.1.mrna1;Target=FBgn0038733.1 690 1698 +
Chr2	gffcl	locus	96901704	96902540	.	-	.	ID=RLOC_00019739;geneIDs=comp145119_c0_seq1.path1;transcripts=comp145119_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96901704	96902540	.	-	.	ID=comp145119_c0_seq1.mrna1;geneID=comp145119_c0_seq1.path1;Name=comp145119_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=830;mismatches=7;indels=0;unknowns=0;Target=comp145119_c0_seq1 837 1 .;CDS_Target=comp145119_c0_seq1 86 3 .;locus=RLOC_00019739
Chr2	stalkie_big_nohaplotig	exon	96901704	96902540	99	-	.	Parent=comp145119_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96902455	96902538	.	-	0	Parent=comp145119_c0_seq1.mrna1
Chr2	gffcl	locus	96920261	96924088	.	+	.	ID=RLOC_00019740;geneIDs=FBgn0038734.4.path1;transcripts=FBgn0038734.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96920261	96924088	.	+	.	ID=FBgn0038734.4.mrna1;geneID=FBgn0038734.4.path1;Name=FBgn0038734.4;Dir=sensecoverage=100.0;identity=99.6;matches=1674;mismatches=6;indels=0;unknowns=0;locus=RLOC_00019740
Chr2	stalkie_big_nohaplotig	exon	96920261	96920455	98	+	.	Parent=FBgn0038734.4.mrna1;Target=FBgn0038734.4 1 195 +
Chr2	stalkie_big_nohaplotig	exon	96920808	96921015	100	+	.	Parent=FBgn0038734.4.mrna1;Target=FBgn0038734.4 196 403 +
Chr2	stalkie_big_nohaplotig	exon	96921084	96921270	100	+	.	Parent=FBgn0038734.4.mrna1;Target=FBgn0038734.4 404 590 +
Chr2	stalkie_big_nohaplotig	exon	96922310	96922426	100	+	.	Parent=FBgn0038734.4.mrna1;Target=FBgn0038734.4 591 707 +
Chr2	stalkie_big_nohaplotig	exon	96923116	96924088	99	+	.	Parent=FBgn0038734.4.mrna1;Target=FBgn0038734.4 708 1680 +
Chr2	stalkie_big_nohaplotig	CDS	96920261	96920455	.	+	0	Parent=FBgn0038734.4.mrna1;Target=FBgn0038734.4 1 195 +
Chr2	stalkie_big_nohaplotig	CDS	96920808	96921015	.	+	0	Parent=FBgn0038734.4.mrna1;Target=FBgn0038734.4 196 403 +
Chr2	stalkie_big_nohaplotig	CDS	96921084	96921270	.	+	2	Parent=FBgn0038734.4.mrna1;Target=FBgn0038734.4 404 590 +
Chr2	stalkie_big_nohaplotig	CDS	96922310	96922426	.	+	1	Parent=FBgn0038734.4.mrna1;Target=FBgn0038734.4 591 707 +
Chr2	stalkie_big_nohaplotig	CDS	96923116	96924088	.	+	1	Parent=FBgn0038734.4.mrna1;Target=FBgn0038734.4 708 1680 +
Chr2	gffcl	locus	96924397	96927655	.	+	.	ID=RLOC_00019741;geneIDs=FBgn0038734.1.path1;transcripts=FBgn0038734.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96924397	96927655	.	+	.	ID=FBgn0038734.1.mrna1;geneID=FBgn0038734.1.path1;Name=FBgn0038734.1;Dir=sensecoverage=100.0;identity=99.9;matches=1340;mismatches=0;indels=1;unknowns=0;locus=RLOC_00019741
Chr2	stalkie_big_nohaplotig	exon	96924397	96924561	100	+	.	Parent=FBgn0038734.1.mrna1;Target=FBgn0038734.1 1 165 +
Chr2	stalkie_big_nohaplotig	exon	96924617	96924824	100	+	.	Parent=FBgn0038734.1.mrna1;Target=FBgn0038734.1 166 373 +
Chr2	stalkie_big_nohaplotig	exon	96926570	96926762	100	+	.	Parent=FBgn0038734.1.mrna1;Target=FBgn0038734.1 374 566 +
Chr2	stalkie_big_nohaplotig	exon	96926818	96926934	100	+	.	Parent=FBgn0038734.1.mrna1;Target=FBgn0038734.1 567 683 +
Chr2	stalkie_big_nohaplotig	exon	96926999	96927655	99	+	.	Parent=FBgn0038734.1.mrna1;Target=FBgn0038734.1 684 1341 +
Chr2	stalkie_big_nohaplotig	CDS	96924397	96924561	.	+	0	Parent=FBgn0038734.1.mrna1;Target=FBgn0038734.1 1 165 +
Chr2	stalkie_big_nohaplotig	CDS	96924617	96924824	.	+	0	Parent=FBgn0038734.1.mrna1;Target=FBgn0038734.1 166 373 +
Chr2	stalkie_big_nohaplotig	CDS	96926570	96926762	.	+	2	Parent=FBgn0038734.1.mrna1;Target=FBgn0038734.1 374 566 +
Chr2	stalkie_big_nohaplotig	CDS	96926818	96926934	.	+	1	Parent=FBgn0038734.1.mrna1;Target=FBgn0038734.1 567 683 +
Chr2	stalkie_big_nohaplotig	CDS	96926999	96927655	.	+	1	Parent=FBgn0038734.1.mrna1;Target=FBgn0038734.1 684 1341 +
Chr2	gffcl	locus	96938519	96941595	.	+	.	ID=RLOC_00019742;geneIDs=FBgn0037720.1.path1;transcripts=FBgn0037720.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96938519	96941595	.	+	.	ID=FBgn0037720.1.mrna1;geneID=FBgn0037720.1.path1;Name=FBgn0037720.1;Dir=sensecoverage=100.0;identity=99.1;matches=2922;mismatches=12;indels=15;unknowns=0;locus=RLOC_00019742
Chr2	stalkie_big_nohaplotig	exon	96938519	96939539	99	+	.	Parent=FBgn0037720.1.mrna1;Target=FBgn0037720.1 1 1021 +
Chr2	stalkie_big_nohaplotig	exon	96939599	96939900	99	+	.	Parent=FBgn0037720.1.mrna1;Target=FBgn0037720.1 1022 1323 +
Chr2	stalkie_big_nohaplotig	exon	96939970	96941595	98	+	.	Parent=FBgn0037720.1.mrna1;Target=FBgn0037720.1 1324 2934 +
Chr2	stalkie_big_nohaplotig	CDS	96938519	96939539	.	+	0	Parent=FBgn0037720.1.mrna1;Target=FBgn0037720.1 1 1021 +
Chr2	stalkie_big_nohaplotig	CDS	96939599	96939900	.	+	2	Parent=FBgn0037720.1.mrna1;Target=FBgn0037720.1 1022 1323 +
Chr2	stalkie_big_nohaplotig	CDS	96939970	96941595	.	+	0	Parent=FBgn0037720.1.mrna1;Target=FBgn0037720.1 1324 2934 +
Chr2	gffcl	locus	96951562	96954950	.	+	.	ID=RLOC_00019743;geneIDs=FBgn0003169.1.path2;transcripts=FBgn0003169.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	96951562	96954950	.	+	.	ID=FBgn0003169.1.mrna2;geneID=FBgn0003169.1.path2;Name=FBgn0003169.1;Dir=sensecoverage=88.5;identity=99.9;matches=1120;mismatches=0;indels=1;unknowns=0;locus=RLOC_00019743
Chr2	stalkie_big_nohaplotig	exon	96951562	96951735	100	+	.	Parent=FBgn0003169.1.mrna2;Target=FBgn0003169.1 146 319 +
Chr2	stalkie_big_nohaplotig	exon	96951814	96951987	100	+	.	Parent=FBgn0003169.1.mrna2;Target=FBgn0003169.1 320 493 +
Chr2	stalkie_big_nohaplotig	exon	96953395	96953534	100	+	.	Parent=FBgn0003169.1.mrna2;Target=FBgn0003169.1 494 633 +
Chr2	stalkie_big_nohaplotig	exon	96953601	96953786	100	+	.	Parent=FBgn0003169.1.mrna2;Target=FBgn0003169.1 634 819 +
Chr2	stalkie_big_nohaplotig	exon	96954438	96954777	100	+	.	Parent=FBgn0003169.1.mrna2;Target=FBgn0003169.1 820 1159 +
Chr2	stalkie_big_nohaplotig	exon	96954845	96954950	99	+	.	Parent=FBgn0003169.1.mrna2;Target=FBgn0003169.1 1160 1266 +
Chr2	stalkie_big_nohaplotig	CDS	96951562	96951735	.	+	1	Parent=FBgn0003169.1.mrna2;Target=FBgn0003169.1 146 319 +
Chr2	stalkie_big_nohaplotig	CDS	96951814	96951987	.	+	1	Parent=FBgn0003169.1.mrna2;Target=FBgn0003169.1 320 493 +
Chr2	stalkie_big_nohaplotig	CDS	96953395	96953534	.	+	1	Parent=FBgn0003169.1.mrna2;Target=FBgn0003169.1 494 633 +
Chr2	stalkie_big_nohaplotig	CDS	96953601	96953786	.	+	2	Parent=FBgn0003169.1.mrna2;Target=FBgn0003169.1 634 819 +
Chr2	stalkie_big_nohaplotig	CDS	96954438	96954777	.	+	2	Parent=FBgn0003169.1.mrna2;Target=FBgn0003169.1 820 1159 +
Chr2	stalkie_big_nohaplotig	CDS	96954845	96954950	.	+	1	Parent=FBgn0003169.1.mrna2;Target=FBgn0003169.1 1160 1266 +
Chr2	gffcl	locus	96957571	96957988	.	+	.	ID=RLOC_00019744;geneIDs=comp157440_c1_seq1.path1;transcripts=comp157440_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96957571	96957988	.	+	.	ID=comp157440_c1_seq1.mrna1;geneID=comp157440_c1_seq1.path1;Name=comp157440_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=418;mismatches=0;indels=0;unknowns=0;Target=comp157440_c1_seq1 418 1 .;CDS_Target=comp157440_c1_seq1 313 191 .;locus=RLOC_00019744
Chr2	stalkie_big_nohaplotig	exon	96957571	96957988	100	+	.	Parent=comp157440_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96957761	96957883	.	+	0	Parent=comp157440_c1_seq1.mrna1
Chr2	gffcl	locus	96959515	96960145	.	+	.	ID=RLOC_00019745;geneIDs=comp156267_c1_seq1.path1;transcripts=comp156267_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96959515	96960145	.	+	.	ID=comp156267_c1_seq1.mrna1;geneID=comp156267_c1_seq1.path1;Name=comp156267_c1_seq1;Dir=indeterminatecoverage=99.4;identity=98.7;matches=623;mismatches=7;indels=1;unknowns=0;Target=comp156267_c1_seq1 634 5 .;CDS_Target=comp156267_c1_seq1 489 406 .;locus=RLOC_00019745
Chr2	stalkie_big_nohaplotig	exon	96959515	96960145	98	+	.	Parent=comp156267_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96959917	96960000	.	+	0	Parent=comp156267_c1_seq1.mrna1
Chr2	gffcl	locus	96961852	96963575	.	.	.	ID=RLOC_00019746;geneIDs=comp146203_c0_seq1.path1,comp154223_c0_seq1.path1;transcripts=comp154223_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96961852	96963233	.	-	.	ID=comp154223_c0_seq1.mrna1;geneID=comp154223_c0_seq1.path1;Name=comp154223_c0_seq1;Dir=indeterminatecoverage=98.6;identity=99.5;matches=1379;mismatches=3;indels=4;unknowns=0;Target=comp154223_c0_seq1 1386 1 .;CDS_Target=comp154223_c0_seq1 1200 1111 .;locus=RLOC_00019746
Chr2	stalkie_big_nohaplotig	exon	96961852	96963233	99	-	.	Parent=comp154223_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96962038	96962127	.	-	0	Parent=comp154223_c0_seq1.mrna1
Chr2	gffcl	locus	96965720	96968502	.	-	.	ID=RLOC_00019747;geneIDs=FBgn0038246.1.path1;transcripts=FBgn0038246.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96965720	96968502	.	-	.	ID=FBgn0038246.1.mrna1;geneID=FBgn0038246.1.path1;Name=FBgn0038246.1;Dir=sensecoverage=100.0;identity=100.0;matches=1053;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019747
Chr2	stalkie_big_nohaplotig	exon	96965720	96965838	100	-	.	Parent=FBgn0038246.1.mrna1;Target=FBgn0038246.1 935 1053 +
Chr2	stalkie_big_nohaplotig	exon	96965909	96966427	100	-	.	Parent=FBgn0038246.1.mrna1;Target=FBgn0038246.1 416 934 +
Chr2	stalkie_big_nohaplotig	exon	96966528	96966599	100	-	.	Parent=FBgn0038246.1.mrna1;Target=FBgn0038246.1 344 415 +
Chr2	stalkie_big_nohaplotig	exon	96966666	96966723	100	-	.	Parent=FBgn0038246.1.mrna1;Target=FBgn0038246.1 286 343 +
Chr2	stalkie_big_nohaplotig	exon	96967879	96968142	100	-	.	Parent=FBgn0038246.1.mrna1;Target=FBgn0038246.1 22 285 +
Chr2	stalkie_big_nohaplotig	exon	96968482	96968502	100	-	.	Parent=FBgn0038246.1.mrna1;Target=FBgn0038246.1 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	96965720	96965838	.	-	2	Parent=FBgn0038246.1.mrna1;Target=FBgn0038246.1 935 1053 +
Chr2	stalkie_big_nohaplotig	CDS	96965909	96966427	.	-	2	Parent=FBgn0038246.1.mrna1;Target=FBgn0038246.1 416 934 +
Chr2	stalkie_big_nohaplotig	CDS	96966528	96966599	.	-	2	Parent=FBgn0038246.1.mrna1;Target=FBgn0038246.1 344 415 +
Chr2	stalkie_big_nohaplotig	CDS	96966666	96966723	.	-	0	Parent=FBgn0038246.1.mrna1;Target=FBgn0038246.1 286 343 +
Chr2	stalkie_big_nohaplotig	CDS	96967879	96968142	.	-	0	Parent=FBgn0038246.1.mrna1;Target=FBgn0038246.1 22 285 +
Chr2	stalkie_big_nohaplotig	CDS	96968482	96968502	.	-	0	Parent=FBgn0038246.1.mrna1;Target=FBgn0038246.1 1 21 +
Chr2	gffcl	locus	96970009	96970420	.	+	.	ID=RLOC_00019748;geneIDs=comp89189_c0_seq1.path1;transcripts=comp89189_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	96970009	96970420	.	+	.	ID=comp89189_c0_seq1.mrna1;geneID=comp89189_c0_seq1.path1;Name=comp89189_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=411;mismatches=1;indels=0;unknowns=0;Target=comp89189_c0_seq1 412 1 .;CDS_Target=comp89189_c0_seq1 220 65 .;locus=RLOC_00019748
Chr2	stalkie_big_nohaplotig	exon	96970009	96970420	99	+	.	Parent=comp89189_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	96970073	96970228	.	+	0	Parent=comp89189_c0_seq1.mrna1
Chr2	gffcl	locus	97046596	97046901	.	+	.	ID=RLOC_00019749;geneIDs=comp96013_c0_seq1.path1;transcripts=comp96013_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97046596	97046901	.	+	.	ID=comp96013_c0_seq1.mrna1;geneID=comp96013_c0_seq1.path1;Name=comp96013_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=306;mismatches=0;indels=0;unknowns=0;Target=comp96013_c0_seq1 306 1 .;CDS_Target=comp96013_c0_seq1 80 3 .;locus=RLOC_00019749
Chr2	stalkie_big_nohaplotig	exon	97046596	97046901	100	+	.	Parent=comp96013_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97046598	97046675	.	+	0	Parent=comp96013_c0_seq1.mrna1
Chr2	gffcl	locus	97050467	97180534	.	-	.	ID=RLOC_00019750;geneIDs=FBgn0014135.path1,comp155108_c2_seq1.path1;transcripts=FBgn0014135.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97050467	97179308	.	-	.	ID=FBgn0014135.mrna1;geneID=FBgn0014135.path1;Name=FBgn0014135;Dir=sensecoverage=100.0;identity=99.9;matches=1217;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019750
Chr2	stalkie_big_nohaplotig	exon	97050467	97050841	99	-	.	Parent=FBgn0014135.mrna1;Target=FBgn0014135 844 1218 +
Chr2	stalkie_big_nohaplotig	exon	97095956	97096059	100	-	.	Parent=FBgn0014135.mrna1;Target=FBgn0014135 740 843 +
Chr2	stalkie_big_nohaplotig	exon	97178570	97179308	100	-	.	Parent=FBgn0014135.mrna1;Target=FBgn0014135 1 739 +
Chr2	stalkie_big_nohaplotig	CDS	97050467	97050841	.	-	0	Parent=FBgn0014135.mrna1;Target=FBgn0014135 844 1218 +
Chr2	stalkie_big_nohaplotig	CDS	97095956	97096059	.	-	2	Parent=FBgn0014135.mrna1;Target=FBgn0014135 740 843 +
Chr2	stalkie_big_nohaplotig	CDS	97178570	97179308	.	-	0	Parent=FBgn0014135.mrna1;Target=FBgn0014135 1 739 +
Chr2	gffcl	locus	97087916	97091210	.	-	.	ID=RLOC_00019751;geneIDs=FBgn0038038.1.path1;transcripts=FBgn0038038.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97087916	97091210	.	-	.	ID=FBgn0038038.1.mrna1;geneID=FBgn0038038.1.path1;Name=FBgn0038038.1;Dir=sensecoverage=99.5;identity=100.0;matches=1021;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019751
Chr2	stalkie_big_nohaplotig	exon	97087916	97088009	100	-	.	Parent=FBgn0038038.1.mrna1;Target=FBgn0038038.1 933 1026 +
Chr2	stalkie_big_nohaplotig	exon	97088063	97088401	100	-	.	Parent=FBgn0038038.1.mrna1;Target=FBgn0038038.1 594 932 +
Chr2	stalkie_big_nohaplotig	exon	97088537	97088683	100	-	.	Parent=FBgn0038038.1.mrna1;Target=FBgn0038038.1 447 593 +
Chr2	stalkie_big_nohaplotig	exon	97088749	97088941	100	-	.	Parent=FBgn0038038.1.mrna1;Target=FBgn0038038.1 254 446 +
Chr2	stalkie_big_nohaplotig	exon	97090901	97091135	100	-	.	Parent=FBgn0038038.1.mrna1;Target=FBgn0038038.1 19 253 +
Chr2	stalkie_big_nohaplotig	exon	97091198	97091210	100	-	.	Parent=FBgn0038038.1.mrna1;Target=FBgn0038038.1 6 18 +
Chr2	stalkie_big_nohaplotig	CDS	97087916	97088009	.	-	1	Parent=FBgn0038038.1.mrna1;Target=FBgn0038038.1 933 1026 +
Chr2	stalkie_big_nohaplotig	CDS	97088063	97088401	.	-	1	Parent=FBgn0038038.1.mrna1;Target=FBgn0038038.1 594 932 +
Chr2	stalkie_big_nohaplotig	CDS	97088537	97088683	.	-	1	Parent=FBgn0038038.1.mrna1;Target=FBgn0038038.1 447 593 +
Chr2	stalkie_big_nohaplotig	CDS	97088749	97088941	.	-	2	Parent=FBgn0038038.1.mrna1;Target=FBgn0038038.1 254 446 +
Chr2	stalkie_big_nohaplotig	CDS	97090901	97091135	.	-	0	Parent=FBgn0038038.1.mrna1;Target=FBgn0038038.1 19 253 +
Chr2	stalkie_big_nohaplotig	CDS	97091198	97091209	.	-	0	Parent=FBgn0038038.1.mrna1;Target=FBgn0038038.1 7 18 +
Chr2	gffcl	locus	97166721	97966467	.	.	.	ID=RLOC_00019752;geneIDs=FBgn0032026.1.path1,FBgn0261984.1.path1,comp156074_c0_seq1.path1,comp157704_c0_seq1.path1,comp161908_c2_seq1.path1;transcripts=comp161908_c2_seq1.mrna1,comp157704_c0_seq1.mrna1,FBgn0261984.1.mrna1,FBgn0032026.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97166721	97966467	.	-	.	ID=comp161908_c2_seq1.mrna1;geneID=comp161908_c2_seq1.path1;Name=comp161908_c2_seq1;Dir=antisensecoverage=60.1;identity=97.1;matches=4022;mismatches=86;indels=33;unknowns=0;locus=RLOC_00019752
Chr2	stalkie_big_nohaplotig	exon	97166721	97166729	88	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1698 1706 -
Chr2	stalkie_big_nohaplotig	exon	97170107	97170127	42	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1707 1718 -
Chr2	stalkie_big_nohaplotig	exon	97177517	97177523	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1719 1725 -
Chr2	stalkie_big_nohaplotig	exon	97183205	97183210	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1726 1731 -
Chr2	stalkie_big_nohaplotig	exon	97196827	97196828	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1732 1733 -
Chr2	stalkie_big_nohaplotig	exon	97198134	97198141	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1734 1741 -
Chr2	stalkie_big_nohaplotig	exon	97199628	97199634	85	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1742 1748 -
Chr2	stalkie_big_nohaplotig	exon	97200475	97200484	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1749 1758 -
Chr2	stalkie_big_nohaplotig	exon	97202951	97202956	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1759 1764 -
Chr2	stalkie_big_nohaplotig	exon	97203306	97203310	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1765 1769 -
Chr2	stalkie_big_nohaplotig	exon	97215501	97215507	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1770 1776 -
Chr2	stalkie_big_nohaplotig	exon	97215522	97215530	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1798 1806 -
Chr2	stalkie_big_nohaplotig	exon	97215868	97215873	44	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1807 1815 -
Chr2	stalkie_big_nohaplotig	exon	97222397	97222405	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1816 1824 -
Chr2	stalkie_big_nohaplotig	exon	97224697	97224711	80	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1825 1839 -
Chr2	stalkie_big_nohaplotig	exon	97229855	97229863	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1840 1848 -
Chr2	stalkie_big_nohaplotig	exon	97261758	97261775	83	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1892 1909 -
Chr2	stalkie_big_nohaplotig	exon	97274719	97274733	80	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1910 1924 -
Chr2	stalkie_big_nohaplotig	exon	97287365	97287370	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1925 1930 -
Chr2	stalkie_big_nohaplotig	exon	97289525	97289533	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1931 1939 -
Chr2	stalkie_big_nohaplotig	exon	97325591	97325595	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1940 1944 -
Chr2	stalkie_big_nohaplotig	exon	97326558	97326565	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1945 1952 -
Chr2	stalkie_big_nohaplotig	exon	97326569	97326570	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1957 1958 -
Chr2	stalkie_big_nohaplotig	exon	97327205	97327222	46	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 1959 1997 -
Chr2	stalkie_big_nohaplotig	exon	97348960	97348972	92	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 2129 2141 -
Chr2	stalkie_big_nohaplotig	exon	97353096	97353112	70	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 2142 2158 -
Chr2	stalkie_big_nohaplotig	exon	97355065	97355074	90	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 2159 2168 -
Chr2	stalkie_big_nohaplotig	exon	97357590	97357603	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 2175 2188 -
Chr2	stalkie_big_nohaplotig	exon	97364133	97364140	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 2263 2270 -
Chr2	stalkie_big_nohaplotig	exon	97370266	97370275	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 2277 2286 -
Chr2	stalkie_big_nohaplotig	exon	97370277	97370283	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 2299 2305 -
Chr2	stalkie_big_nohaplotig	exon	97375500	97375509	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 2306 2315 -
Chr2	stalkie_big_nohaplotig	exon	97392359	97392628	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 2328 2597 -
Chr2	stalkie_big_nohaplotig	exon	97395115	97395531	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 2598 3014 -
Chr2	stalkie_big_nohaplotig	exon	97395586	97396364	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 3015 3793 -
Chr2	stalkie_big_nohaplotig	exon	97396421	97396965	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 3794 4338 -
Chr2	stalkie_big_nohaplotig	exon	97397028	97397855	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 4339 5166 -
Chr2	stalkie_big_nohaplotig	exon	97399174	97399525	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 5167 5518 -
Chr2	stalkie_big_nohaplotig	exon	97399584	97400001	94	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 5519 5936 -
Chr2	stalkie_big_nohaplotig	exon	97400057	97400223	78	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 5937 6103 -
Chr2	stalkie_big_nohaplotig	exon	97924857	97924865	100	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 6107 6115 -
Chr2	stalkie_big_nohaplotig	exon	97941102	97941111	80	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 6116 6125 -
Chr2	stalkie_big_nohaplotig	exon	97966456	97966467	91	-	.	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 6126 6137 -
Chr2	stalkie_big_nohaplotig	CDS	97392599	97392628	.	-	0	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 2568 2597 .
Chr2	stalkie_big_nohaplotig	CDS	97395115	97395531	.	-	0	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 2598 3014 .
Chr2	stalkie_big_nohaplotig	CDS	97395586	97396364	.	-	2	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 3015 3793 .
Chr2	stalkie_big_nohaplotig	CDS	97396421	97396965	.	-	1	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 3794 4338 .
Chr2	stalkie_big_nohaplotig	CDS	97397028	97397855	.	-	1	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 4339 5166 .
Chr2	stalkie_big_nohaplotig	CDS	97399174	97399525	.	-	2	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 5167 5518 .
Chr2	stalkie_big_nohaplotig	CDS	97399584	97400001	.	-	0	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 5519 5936 .
Chr2	stalkie_big_nohaplotig	CDS	97400057	97400223	.	-	2	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 5937 6103 .
Chr2	stalkie_big_nohaplotig	CDS	97924857	97924865	.	-	2	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 6107 6115 .
Chr2	stalkie_big_nohaplotig	CDS	97941102	97941111	.	-	0	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 6116 6125 .
Chr2	stalkie_big_nohaplotig	CDS	97966456	97966467	.	-	0	Parent=comp161908_c2_seq1.mrna1;Target=comp161908_c2_seq1 6126 6137 .
Chr2	stalkie_big_nohaplotig	mRNA	97275031	97276447	.	+	.	ID=comp157704_c0_seq1.mrna1;geneID=comp157704_c0_seq1.path1;Name=comp157704_c0_seq1;Dir=indeterminatecoverage=99.3;identity=93.2;matches=1411;mismatches=6;indels=97;unknowns=0;Target=comp157704_c0_seq1 1522 9 .;CDS_Target=comp157704_c0_seq1 1302 1123 .;locus=RLOC_00019752
Chr2	stalkie_big_nohaplotig	exon	97275031	97276447	93	+	.	Parent=comp157704_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97276048	97276227	.	+	0	Parent=comp157704_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97286987	97310286	.	-	.	ID=FBgn0261984.1.mrna1;geneID=FBgn0261984.1.path1;Name=FBgn0261984.1;Dir=sensecoverage=100.0;identity=100.0;matches=3320;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019752
Chr2	stalkie_big_nohaplotig	exon	97286987	97287598	100	-	.	Parent=FBgn0261984.1.mrna1;Target=FBgn0261984.1 2710 3321 +
Chr2	stalkie_big_nohaplotig	exon	97287656	97287970	99	-	.	Parent=FBgn0261984.1.mrna1;Target=FBgn0261984.1 2395 2709 +
Chr2	stalkie_big_nohaplotig	exon	97289502	97289669	100	-	.	Parent=FBgn0261984.1.mrna1;Target=FBgn0261984.1 2227 2394 +
Chr2	stalkie_big_nohaplotig	exon	97289722	97289912	100	-	.	Parent=FBgn0261984.1.mrna1;Target=FBgn0261984.1 2036 2226 +
Chr2	stalkie_big_nohaplotig	exon	97290171	97291222	100	-	.	Parent=FBgn0261984.1.mrna1;Target=FBgn0261984.1 984 2035 +
Chr2	stalkie_big_nohaplotig	exon	97291279	97291501	100	-	.	Parent=FBgn0261984.1.mrna1;Target=FBgn0261984.1 761 983 +
Chr2	stalkie_big_nohaplotig	exon	97291564	97292010	100	-	.	Parent=FBgn0261984.1.mrna1;Target=FBgn0261984.1 314 760 +
Chr2	stalkie_big_nohaplotig	exon	97309904	97310018	100	-	.	Parent=FBgn0261984.1.mrna1;Target=FBgn0261984.1 199 313 +
Chr2	stalkie_big_nohaplotig	exon	97310089	97310286	100	-	.	Parent=FBgn0261984.1.mrna1;Target=FBgn0261984.1 1 198 +
Chr2	stalkie_big_nohaplotig	CDS	97286987	97287598	.	-	0	Parent=FBgn0261984.1.mrna1;Target=FBgn0261984.1 2710 3321 +
Chr2	stalkie_big_nohaplotig	CDS	97287656	97287970	.	-	0	Parent=FBgn0261984.1.mrna1;Target=FBgn0261984.1 2395 2709 +
Chr2	stalkie_big_nohaplotig	CDS	97289502	97289669	.	-	0	Parent=FBgn0261984.1.mrna1;Target=FBgn0261984.1 2227 2394 +
Chr2	stalkie_big_nohaplotig	CDS	97289722	97289912	.	-	2	Parent=FBgn0261984.1.mrna1;Target=FBgn0261984.1 2036 2226 +
Chr2	stalkie_big_nohaplotig	CDS	97290171	97291222	.	-	1	Parent=FBgn0261984.1.mrna1;Target=FBgn0261984.1 984 2035 +
Chr2	stalkie_big_nohaplotig	CDS	97291279	97291501	.	-	2	Parent=FBgn0261984.1.mrna1;Target=FBgn0261984.1 761 983 +
Chr2	stalkie_big_nohaplotig	CDS	97291564	97292010	.	-	2	Parent=FBgn0261984.1.mrna1;Target=FBgn0261984.1 314 760 +
Chr2	stalkie_big_nohaplotig	CDS	97309904	97310018	.	-	0	Parent=FBgn0261984.1.mrna1;Target=FBgn0261984.1 199 313 +
Chr2	stalkie_big_nohaplotig	CDS	97310089	97310286	.	-	0	Parent=FBgn0261984.1.mrna1;Target=FBgn0261984.1 1 198 +
Chr2	stalkie_big_nohaplotig	mRNA	97392602	97411580	.	-	.	ID=FBgn0032026.1.mrna1;geneID=FBgn0032026.1.path1;Name=FBgn0032026.1;Dir=sensecoverage=100.0;identity=100.0;matches=4065;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019752
Chr2	stalkie_big_nohaplotig	exon	97392602	97392628	100	-	.	Parent=FBgn0032026.1.mrna1;Target=FBgn0032026.1 4039 4065 +
Chr2	stalkie_big_nohaplotig	exon	97395115	97395531	100	-	.	Parent=FBgn0032026.1.mrna1;Target=FBgn0032026.1 3622 4038 +
Chr2	stalkie_big_nohaplotig	exon	97395586	97396364	100	-	.	Parent=FBgn0032026.1.mrna1;Target=FBgn0032026.1 2843 3621 +
Chr2	stalkie_big_nohaplotig	exon	97396421	97396965	100	-	.	Parent=FBgn0032026.1.mrna1;Target=FBgn0032026.1 2298 2842 +
Chr2	stalkie_big_nohaplotig	exon	97397028	97397855	100	-	.	Parent=FBgn0032026.1.mrna1;Target=FBgn0032026.1 1470 2297 +
Chr2	stalkie_big_nohaplotig	exon	97399174	97399525	100	-	.	Parent=FBgn0032026.1.mrna1;Target=FBgn0032026.1 1118 1469 +
Chr2	stalkie_big_nohaplotig	exon	97399584	97400001	100	-	.	Parent=FBgn0032026.1.mrna1;Target=FBgn0032026.1 700 1117 +
Chr2	stalkie_big_nohaplotig	exon	97400057	97400423	100	-	.	Parent=FBgn0032026.1.mrna1;Target=FBgn0032026.1 333 699 +
Chr2	stalkie_big_nohaplotig	exon	97400499	97400658	100	-	.	Parent=FBgn0032026.1.mrna1;Target=FBgn0032026.1 173 332 +
Chr2	stalkie_big_nohaplotig	exon	97410196	97410281	100	-	.	Parent=FBgn0032026.1.mrna1;Target=FBgn0032026.1 87 172 +
Chr2	stalkie_big_nohaplotig	exon	97411495	97411580	100	-	.	Parent=FBgn0032026.1.mrna1;Target=FBgn0032026.1 1 86 +
Chr2	stalkie_big_nohaplotig	CDS	97392602	97392628	.	-	0	Parent=FBgn0032026.1.mrna1;Target=FBgn0032026.1 4039 4065 +
Chr2	stalkie_big_nohaplotig	CDS	97395115	97395531	.	-	0	Parent=FBgn0032026.1.mrna1;Target=FBgn0032026.1 3622 4038 +
Chr2	stalkie_big_nohaplotig	CDS	97395586	97396364	.	-	2	Parent=FBgn0032026.1.mrna1;Target=FBgn0032026.1 2843 3621 +
Chr2	stalkie_big_nohaplotig	CDS	97396421	97396965	.	-	1	Parent=FBgn0032026.1.mrna1;Target=FBgn0032026.1 2298 2842 +
Chr2	stalkie_big_nohaplotig	CDS	97397028	97397855	.	-	1	Parent=FBgn0032026.1.mrna1;Target=FBgn0032026.1 1470 2297 +
Chr2	stalkie_big_nohaplotig	CDS	97399174	97399525	.	-	2	Parent=FBgn0032026.1.mrna1;Target=FBgn0032026.1 1118 1469 +
Chr2	stalkie_big_nohaplotig	CDS	97399584	97400001	.	-	0	Parent=FBgn0032026.1.mrna1;Target=FBgn0032026.1 700 1117 +
Chr2	stalkie_big_nohaplotig	CDS	97400057	97400423	.	-	1	Parent=FBgn0032026.1.mrna1;Target=FBgn0032026.1 333 699 +
Chr2	stalkie_big_nohaplotig	CDS	97400499	97400658	.	-	2	Parent=FBgn0032026.1.mrna1;Target=FBgn0032026.1 173 332 +
Chr2	stalkie_big_nohaplotig	CDS	97410196	97410281	.	-	1	Parent=FBgn0032026.1.mrna1;Target=FBgn0032026.1 87 172 +
Chr2	stalkie_big_nohaplotig	CDS	97411495	97411580	.	-	0	Parent=FBgn0032026.1.mrna1;Target=FBgn0032026.1 1 86 +
Chr2	gffcl	locus	97250803	97251797	.	-	.	ID=RLOC_00019753;geneIDs=comp151656_c0_seq1.path1;transcripts=comp151656_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97250803	97251797	.	-	.	ID=comp151656_c0_seq1.mrna1;geneID=comp151656_c0_seq1.path1;Name=comp151656_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=992;mismatches=3;indels=0;unknowns=0;Target=comp151656_c0_seq1 995 1 .;CDS_Target=comp151656_c0_seq1 492 331 .;locus=RLOC_00019753
Chr2	stalkie_big_nohaplotig	exon	97250803	97251797	99	-	.	Parent=comp151656_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97251306	97251467	.	-	0	Parent=comp151656_c0_seq1.mrna1
Chr2	gffcl	locus	97258655	97278088	.	+	.	ID=RLOC_00019754;geneIDs=FBgn0038735.1.path1;transcripts=FBgn0038735.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97258655	97278088	.	+	.	ID=FBgn0038735.1.mrna1;geneID=FBgn0038735.1.path1;Name=FBgn0038735.1;Dir=sensecoverage=100.0;identity=100.0;matches=1596;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019754
Chr2	stalkie_big_nohaplotig	exon	97258655	97258930	100	+	.	Parent=FBgn0038735.1.mrna1;Target=FBgn0038735.1 1 276 +
Chr2	stalkie_big_nohaplotig	exon	97267800	97267935	100	+	.	Parent=FBgn0038735.1.mrna1;Target=FBgn0038735.1 277 412 +
Chr2	stalkie_big_nohaplotig	exon	97268005	97268115	100	+	.	Parent=FBgn0038735.1.mrna1;Target=FBgn0038735.1 413 523 +
Chr2	stalkie_big_nohaplotig	exon	97269316	97269363	100	+	.	Parent=FBgn0038735.1.mrna1;Target=FBgn0038735.1 524 571 +
Chr2	stalkie_big_nohaplotig	exon	97269525	97269607	100	+	.	Parent=FBgn0038735.1.mrna1;Target=FBgn0038735.1 572 654 +
Chr2	stalkie_big_nohaplotig	exon	97269863	97269925	100	+	.	Parent=FBgn0038735.1.mrna1;Target=FBgn0038735.1 655 717 +
Chr2	stalkie_big_nohaplotig	exon	97276899	97277081	100	+	.	Parent=FBgn0038735.1.mrna1;Target=FBgn0038735.1 718 900 +
Chr2	stalkie_big_nohaplotig	exon	97277328	97277736	100	+	.	Parent=FBgn0038735.1.mrna1;Target=FBgn0038735.1 901 1309 +
Chr2	stalkie_big_nohaplotig	exon	97277802	97278088	100	+	.	Parent=FBgn0038735.1.mrna1;Target=FBgn0038735.1 1310 1596 +
Chr2	stalkie_big_nohaplotig	CDS	97258655	97258930	.	+	0	Parent=FBgn0038735.1.mrna1;Target=FBgn0038735.1 1 276 +
Chr2	stalkie_big_nohaplotig	CDS	97267800	97267935	.	+	0	Parent=FBgn0038735.1.mrna1;Target=FBgn0038735.1 277 412 +
Chr2	stalkie_big_nohaplotig	CDS	97268005	97268115	.	+	2	Parent=FBgn0038735.1.mrna1;Target=FBgn0038735.1 413 523 +
Chr2	stalkie_big_nohaplotig	CDS	97269316	97269363	.	+	2	Parent=FBgn0038735.1.mrna1;Target=FBgn0038735.1 524 571 +
Chr2	stalkie_big_nohaplotig	CDS	97269525	97269607	.	+	2	Parent=FBgn0038735.1.mrna1;Target=FBgn0038735.1 572 654 +
Chr2	stalkie_big_nohaplotig	CDS	97269863	97269925	.	+	0	Parent=FBgn0038735.1.mrna1;Target=FBgn0038735.1 655 717 +
Chr2	stalkie_big_nohaplotig	CDS	97276899	97277081	.	+	0	Parent=FBgn0038735.1.mrna1;Target=FBgn0038735.1 718 900 +
Chr2	stalkie_big_nohaplotig	CDS	97277328	97277736	.	+	0	Parent=FBgn0038735.1.mrna1;Target=FBgn0038735.1 901 1309 +
Chr2	stalkie_big_nohaplotig	CDS	97277802	97278088	.	+	2	Parent=FBgn0038735.1.mrna1;Target=FBgn0038735.1 1310 1596 +
Chr2	gffcl	locus	97279099	97280718	.	-	.	ID=RLOC_00019756;geneIDs=comp161584_c0_seq1.path1;transcripts=comp161584_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97279099	97280718	.	-	.	ID=comp161584_c0_seq1.mrna1;geneID=comp161584_c0_seq1.path1;Name=comp161584_c0_seq1;Dir=indeterminatecoverage=75.4;identity=95.4;matches=1588;mismatches=32;indels=44;unknowns=0;Target=comp161584_c0_seq1 1664 1 .;CDS_Target=comp161584_c0_seq1 1498 1427 .;locus=RLOC_00019756
Chr2	stalkie_big_nohaplotig	exon	97279099	97280718	95	-	.	Parent=comp161584_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97279258	97279311	.	-	0	Parent=comp161584_c0_seq1.mrna1
Chr2	gffcl	locus	97281118	97282182	.	+	.	ID=RLOC_00019757;geneIDs=comp154350_c0_seq1.path1;transcripts=comp154350_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97281118	97282182	.	+	.	ID=comp154350_c0_seq1.mrna1;geneID=comp154350_c0_seq1.path1;Name=comp154350_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1063;mismatches=2;indels=0;unknowns=0;Target=comp154350_c0_seq1 1065 1 .;CDS_Target=comp154350_c0_seq1 548 435 .;locus=RLOC_00019757
Chr2	stalkie_big_nohaplotig	exon	97281118	97282182	99	+	.	Parent=comp154350_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97281552	97281665	.	+	0	Parent=comp154350_c0_seq1.mrna1
Chr2	gffcl	locus	97333082	97333180	.	-	.	ID=RLOC_00019758;geneIDs=comp150207_c0_seq1.path2;transcripts=comp150207_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	97333082	97333180	.	-	.	ID=comp150207_c0_seq1.mrna2;geneID=comp150207_c0_seq1.path2;Name=comp150207_c0_seq1;Dir=indeterminatecoverage=13.0;identity=100.0;matches=99;mismatches=0;indels=0;unknowns=0;Target=comp150207_c0_seq1 761 663 .;locus=RLOC_00019758
Chr2	stalkie_big_nohaplotig	exon	97333082	97333180	100	-	.	Parent=comp150207_c0_seq1.mrna2
Chr2	gffcl	locus	97334159	97352390	.	+	.	ID=RLOC_00019759;geneIDs=FBgn0038740.1.path1;transcripts=FBgn0038740.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97334159	97352390	.	+	.	ID=FBgn0038740.1.mrna1;geneID=FBgn0038740.1.path1;Name=FBgn0038740.1;Dir=sensecoverage=100.0;identity=99.6;matches=3982;mismatches=16;indels=1;unknowns=0;locus=RLOC_00019759
Chr2	stalkie_big_nohaplotig	exon	97334159	97334222	100	+	.	Parent=FBgn0038740.1.mrna1;Target=FBgn0038740.1 1 64 +
Chr2	stalkie_big_nohaplotig	exon	97334492	97334577	98	+	.	Parent=FBgn0038740.1.mrna1;Target=FBgn0038740.1 65 151 +
Chr2	stalkie_big_nohaplotig	exon	97346789	97346948	100	+	.	Parent=FBgn0038740.1.mrna1;Target=FBgn0038740.1 152 311 +
Chr2	stalkie_big_nohaplotig	exon	97347020	97347392	100	+	.	Parent=FBgn0038740.1.mrna1;Target=FBgn0038740.1 312 684 +
Chr2	stalkie_big_nohaplotig	exon	97347455	97348209	100	+	.	Parent=FBgn0038740.1.mrna1;Target=FBgn0038740.1 685 1439 +
Chr2	stalkie_big_nohaplotig	exon	97348302	97349144	100	+	.	Parent=FBgn0038740.1.mrna1;Target=FBgn0038740.1 1440 2282 +
Chr2	stalkie_big_nohaplotig	exon	97349203	97349687	100	+	.	Parent=FBgn0038740.1.mrna1;Target=FBgn0038740.1 2283 2767 +
Chr2	stalkie_big_nohaplotig	exon	97349751	97350529	98	+	.	Parent=FBgn0038740.1.mrna1;Target=FBgn0038740.1 2768 3546 +
Chr2	stalkie_big_nohaplotig	exon	97350590	97351006	99	+	.	Parent=FBgn0038740.1.mrna1;Target=FBgn0038740.1 3547 3963 +
Chr2	stalkie_big_nohaplotig	exon	97352355	97352390	100	+	.	Parent=FBgn0038740.1.mrna1;Target=FBgn0038740.1 3964 3999 +
Chr2	stalkie_big_nohaplotig	CDS	97334161	97334222	.	+	0	Parent=FBgn0038740.1.mrna1;Target=FBgn0038740.1 3 64 +
Chr2	stalkie_big_nohaplotig	CDS	97334492	97334545	.	+	1	Parent=FBgn0038740.1.mrna1;Target=FBgn0038740.1 65 119 +
Chr2	gffcl	locus	97425437	97426176	.	+	.	ID=RLOC_00019762;geneIDs=comp151913_c0_seq1.path1;transcripts=comp151913_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97425437	97426176	.	+	.	ID=comp151913_c0_seq1.mrna1;geneID=comp151913_c0_seq1.path1;Name=comp151913_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=735;mismatches=5;indels=0;unknowns=0;Target=comp151913_c0_seq1 740 1 .;CDS_Target=comp151913_c0_seq1 157 47 .;locus=RLOC_00019762
Chr2	stalkie_big_nohaplotig	exon	97425437	97426176	99	+	.	Parent=comp151913_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97425483	97425593	.	+	0	Parent=comp151913_c0_seq1.mrna1
Chr2	gffcl	locus	97430610	97431506	.	.	.	ID=RLOC_00019763;geneIDs=FBgn0010265.1.path1,comp152834_c0_seq1.path1;transcripts=FBgn0010265.1.mrna1,comp152834_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97430610	97431506	.	-	.	ID=FBgn0010265.1.mrna1;geneID=FBgn0010265.1.path1;Name=FBgn0010265.1;Dir=sensecoverage=100.0;identity=99.3;matches=551;mismatches=4;indels=0;unknowns=0;locus=RLOC_00019763
Chr2	stalkie_big_nohaplotig	exon	97430610	97430911	99	-	.	Parent=FBgn0010265.1.mrna1;Target=FBgn0010265.1 254 555 +
Chr2	stalkie_big_nohaplotig	exon	97431003	97431130	98	-	.	Parent=FBgn0010265.1.mrna1;Target=FBgn0010265.1 126 253 +
Chr2	stalkie_big_nohaplotig	exon	97431382	97431506	100	-	.	Parent=FBgn0010265.1.mrna1;Target=FBgn0010265.1 1 125 +
Chr2	stalkie_big_nohaplotig	CDS	97430610	97430911	.	-	2	Parent=FBgn0010265.1.mrna1;Target=FBgn0010265.1 254 555 +
Chr2	stalkie_big_nohaplotig	CDS	97431003	97431130	.	-	1	Parent=FBgn0010265.1.mrna1;Target=FBgn0010265.1 126 253 +
Chr2	stalkie_big_nohaplotig	CDS	97431382	97431506	.	-	0	Parent=FBgn0010265.1.mrna1;Target=FBgn0010265.1 1 125 +
Chr2	stalkie_big_nohaplotig	mRNA	97431109	97431405	.	+	.	ID=comp152834_c0_seq1.mrna1;geneID=comp152834_c0_seq1.path1;Name=comp152834_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=294;mismatches=3;indels=0;unknowns=0;Target=comp152834_c0_seq1 297 1 .;CDS_Target=comp152834_c0_seq1 296 213 .;locus=RLOC_00019763
Chr2	stalkie_big_nohaplotig	exon	97431109	97431405	98	+	.	Parent=comp152834_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97431321	97431404	.	+	0	Parent=comp152834_c0_seq1.mrna1
Chr2	gffcl	locus	97468228	97468287	.	-	.	ID=RLOC_00019765;geneIDs=comp148218_c0_seq1.path1;transcripts=comp148218_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97468228	97468287	.	-	.	ID=comp148218_c0_seq1.mrna1;geneID=comp148218_c0_seq1.path1;Name=comp148218_c0_seq1;Dir=indeterminatecoverage=21.7;identity=98.3;matches=59;mismatches=1;indels=0;unknowns=0;Target=comp148218_c0_seq1 76 17 .;CDS_Target=comp148218_c0_seq1 66 19 .;locus=RLOC_00019765
Chr2	stalkie_big_nohaplotig	exon	97468228	97468287	98	-	.	Parent=comp148218_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97468238	97468285	.	-	0	Parent=comp148218_c0_seq1.mrna1
Chr2	gffcl	locus	97468417	97488413	.	+	.	ID=RLOC_00019766;geneIDs=comp73563_c0_seq1.path1,comp151698_c0_seq1.path1;transcripts=comp73563_c0_seq1.mrna1,comp151698_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97468417	97469090	.	+	.	ID=comp73563_c0_seq1.mrna1;geneID=comp73563_c0_seq1.path1;Name=comp73563_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=640;mismatches=8;indels=0;unknowns=0;Target=comp73563_c0_seq1 561 430 .;locus=RLOC_00019766
Chr2	stalkie_big_nohaplotig	exon	97468417	97468838	99	+	.	Parent=comp73563_c0_seq1.mrna1;Target=comp73563_c0_seq1 422 1 .
Chr2	stalkie_big_nohaplotig	exon	97468865	97469090	97	+	.	Parent=comp73563_c0_seq1.mrna1;Target=comp73563_c0_seq1 648 423 .
Chr2	stalkie_big_nohaplotig	CDS	97468872	97469003	.	+	0	Parent=comp73563_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97468422	97488413	.	+	.	ID=comp151698_c0_seq1.mrna1;geneID=comp151698_c0_seq1.path1;Name=comp151698_c0_seq1;Dir=indeterminatecoverage=91.4;identity=98.5;matches=536;mismatches=4;indels=4;unknowns=0;locus=RLOC_00019766
Chr2	stalkie_big_nohaplotig	exon	97468422	97468430	100	+	.	Parent=comp151698_c0_seq1.mrna1;Target=comp151698_c0_seq1 52 44 .
Chr2	stalkie_big_nohaplotig	exon	97475757	97475759	100	+	.	Parent=comp151698_c0_seq1.mrna1;Target=comp151698_c0_seq1 55 53 .
Chr2	stalkie_big_nohaplotig	exon	97487886	97488413	98	+	.	Parent=comp151698_c0_seq1.mrna1;Target=comp151698_c0_seq1 587 56 .
Chr2	stalkie_big_nohaplotig	CDS	97468423	97468430	.	+	0	Parent=comp151698_c0_seq1.mrna1;Target=comp151698_c0_seq1 52 45 .
Chr2	stalkie_big_nohaplotig	CDS	97475757	97475759	.	+	1	Parent=comp151698_c0_seq1.mrna1;Target=comp151698_c0_seq1 55 53 .
Chr2	stalkie_big_nohaplotig	CDS	97487886	97487988	.	+	1	Parent=comp151698_c0_seq1.mrna1;Target=comp151698_c0_seq1 158 56 .
Chr2	gffcl	locus	97469977	97472373	.	+	.	ID=RLOC_00019767;geneIDs=FBgn0087005.1.path1;transcripts=FBgn0087005.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97469977	97472373	.	+	.	ID=FBgn0087005.1.mrna1;geneID=FBgn0087005.1.path1;Name=FBgn0087005.1;Dir=sensecoverage=100.0;identity=99.8;matches=521;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019767
Chr2	stalkie_big_nohaplotig	exon	97469977	97470007	100	+	.	Parent=FBgn0087005.1.mrna1;Target=FBgn0087005.1 1 31 +
Chr2	stalkie_big_nohaplotig	exon	97470073	97470298	100	+	.	Parent=FBgn0087005.1.mrna1;Target=FBgn0087005.1 32 257 +
Chr2	stalkie_big_nohaplotig	exon	97472109	97472373	99	+	.	Parent=FBgn0087005.1.mrna1;Target=FBgn0087005.1 258 522 +
Chr2	stalkie_big_nohaplotig	CDS	97469977	97470007	.	+	0	Parent=FBgn0087005.1.mrna1;Target=FBgn0087005.1 1 31 +
Chr2	stalkie_big_nohaplotig	CDS	97470073	97470298	.	+	2	Parent=FBgn0087005.1.mrna1;Target=FBgn0087005.1 32 257 +
Chr2	stalkie_big_nohaplotig	CDS	97472109	97472373	.	+	1	Parent=FBgn0087005.1.mrna1;Target=FBgn0087005.1 258 522 +
Chr2	gffcl	locus	97470574	97471325	.	-	.	ID=RLOC_00019768;geneIDs=comp154227_c0_seq1.path1;transcripts=comp154227_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97470574	97471325	.	-	.	ID=comp154227_c0_seq1.mrna1;geneID=comp154227_c0_seq1.path1;Name=comp154227_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=752;mismatches=0;indels=0;unknowns=0;Target=comp154227_c0_seq1 752 1 .;CDS_Target=comp154227_c0_seq1 438 271 .;locus=RLOC_00019768
Chr2	stalkie_big_nohaplotig	exon	97470574	97471325	100	-	.	Parent=comp154227_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97470888	97471055	.	-	0	Parent=comp154227_c0_seq1.mrna1
Chr2	gffcl	locus	97471360	97471661	.	-	.	ID=RLOC_00019769;geneIDs=comp143796_c0_seq1.path1;transcripts=comp143796_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97471360	97471661	.	-	.	ID=comp143796_c0_seq1.mrna1;geneID=comp143796_c0_seq1.path1;Name=comp143796_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=299;mismatches=1;indels=3;unknowns=0;Target=comp143796_c0_seq1 301 1 .;CDS_Target=comp143796_c0_seq1 139 44 .;locus=RLOC_00019769
Chr2	stalkie_big_nohaplotig	exon	97471360	97471661	98	-	.	Parent=comp143796_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97471522	97471616	.	-	0	Parent=comp143796_c0_seq1.mrna1
Chr2	gffcl	locus	97472832	97477984	.	-	.	ID=RLOC_00019770;geneIDs=FBgn0037301.1.path1;transcripts=FBgn0037301.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97472832	97477984	.	-	.	ID=FBgn0037301.1.mrna1;geneID=FBgn0037301.1.path1;Name=FBgn0037301.1;Dir=sensecoverage=100.0;identity=99.8;matches=2886;mismatches=6;indels=0;unknowns=0;locus=RLOC_00019770
Chr2	stalkie_big_nohaplotig	exon	97472832	97473026	98	-	.	Parent=FBgn0037301.1.mrna1;Target=FBgn0037301.1 2698 2892 +
Chr2	stalkie_big_nohaplotig	exon	97473096	97473263	99	-	.	Parent=FBgn0037301.1.mrna1;Target=FBgn0037301.1 2530 2697 +
Chr2	stalkie_big_nohaplotig	exon	97475139	97475384	100	-	.	Parent=FBgn0037301.1.mrna1;Target=FBgn0037301.1 2284 2529 +
Chr2	stalkie_big_nohaplotig	exon	97475440	97476900	99	-	.	Parent=FBgn0037301.1.mrna1;Target=FBgn0037301.1 823 2283 +
Chr2	stalkie_big_nohaplotig	exon	97477042	97477394	100	-	.	Parent=FBgn0037301.1.mrna1;Target=FBgn0037301.1 470 822 +
Chr2	stalkie_big_nohaplotig	exon	97477459	97477842	100	-	.	Parent=FBgn0037301.1.mrna1;Target=FBgn0037301.1 86 469 +
Chr2	stalkie_big_nohaplotig	exon	97477900	97477984	100	-	.	Parent=FBgn0037301.1.mrna1;Target=FBgn0037301.1 1 85 +
Chr2	stalkie_big_nohaplotig	CDS	97472832	97473026	.	-	0	Parent=FBgn0037301.1.mrna1;Target=FBgn0037301.1 2698 2892 +
Chr2	stalkie_big_nohaplotig	CDS	97473096	97473263	.	-	0	Parent=FBgn0037301.1.mrna1;Target=FBgn0037301.1 2530 2697 +
Chr2	stalkie_big_nohaplotig	CDS	97475139	97475384	.	-	0	Parent=FBgn0037301.1.mrna1;Target=FBgn0037301.1 2284 2529 +
Chr2	stalkie_big_nohaplotig	CDS	97475440	97476900	.	-	0	Parent=FBgn0037301.1.mrna1;Target=FBgn0037301.1 823 2283 +
Chr2	stalkie_big_nohaplotig	CDS	97477042	97477394	.	-	2	Parent=FBgn0037301.1.mrna1;Target=FBgn0037301.1 470 822 +
Chr2	stalkie_big_nohaplotig	CDS	97477459	97477842	.	-	2	Parent=FBgn0037301.1.mrna1;Target=FBgn0037301.1 86 469 +
Chr2	stalkie_big_nohaplotig	CDS	97477900	97477984	.	-	0	Parent=FBgn0037301.1.mrna1;Target=FBgn0037301.1 1 85 +
Chr2	gffcl	locus	97480147	97486375	.	+	.	ID=RLOC_00019771;geneIDs=FBgn0040208.1.path1;transcripts=FBgn0040208.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97480147	97486375	.	+	.	ID=FBgn0040208.1.mrna1;geneID=FBgn0040208.1.path1;Name=FBgn0040208.1;Dir=sensecoverage=100.0;identity=99.9;matches=1711;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019771
Chr2	stalkie_big_nohaplotig	exon	97480147	97480173	100	+	.	Parent=FBgn0040208.1.mrna1;Target=FBgn0040208.1 1 27 +
Chr2	stalkie_big_nohaplotig	exon	97480764	97480985	99	+	.	Parent=FBgn0040208.1.mrna1;Target=FBgn0040208.1 28 249 +
Chr2	stalkie_big_nohaplotig	exon	97481039	97481262	100	+	.	Parent=FBgn0040208.1.mrna1;Target=FBgn0040208.1 250 473 +
Chr2	stalkie_big_nohaplotig	exon	97481331	97481695	100	+	.	Parent=FBgn0040208.1.mrna1;Target=FBgn0040208.1 474 838 +
Chr2	stalkie_big_nohaplotig	exon	97481902	97482023	100	+	.	Parent=FBgn0040208.1.mrna1;Target=FBgn0040208.1 839 960 +
Chr2	stalkie_big_nohaplotig	exon	97484636	97485192	100	+	.	Parent=FBgn0040208.1.mrna1;Target=FBgn0040208.1 961 1517 +
Chr2	stalkie_big_nohaplotig	exon	97486180	97486375	100	+	.	Parent=FBgn0040208.1.mrna1;Target=FBgn0040208.1 1518 1713 +
Chr2	stalkie_big_nohaplotig	CDS	97480147	97480173	.	+	0	Parent=FBgn0040208.1.mrna1;Target=FBgn0040208.1 1 27 +
Chr2	stalkie_big_nohaplotig	CDS	97480764	97480985	.	+	0	Parent=FBgn0040208.1.mrna1;Target=FBgn0040208.1 28 249 +
Chr2	stalkie_big_nohaplotig	CDS	97481039	97481262	.	+	0	Parent=FBgn0040208.1.mrna1;Target=FBgn0040208.1 250 473 +
Chr2	stalkie_big_nohaplotig	CDS	97481331	97481695	.	+	1	Parent=FBgn0040208.1.mrna1;Target=FBgn0040208.1 474 838 +
Chr2	stalkie_big_nohaplotig	CDS	97481902	97482023	.	+	2	Parent=FBgn0040208.1.mrna1;Target=FBgn0040208.1 839 960 +
Chr2	stalkie_big_nohaplotig	CDS	97484636	97485192	.	+	0	Parent=FBgn0040208.1.mrna1;Target=FBgn0040208.1 961 1517 +
Chr2	stalkie_big_nohaplotig	CDS	97486180	97486375	.	+	1	Parent=FBgn0040208.1.mrna1;Target=FBgn0040208.1 1518 1713 +
Chr2	gffcl	locus	97488758	97489402	.	-	.	ID=RLOC_00019772;geneIDs=FBgn0037299.1.path1;transcripts=FBgn0037299.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97488758	97489402	.	-	.	ID=FBgn0037299.1.mrna1;geneID=FBgn0037299.1.path1;Name=FBgn0037299.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=645;mismatches=0;indels=0;unknowns=0;Target=FBgn0037299.1 645 1 .;locus=RLOC_00019772
Chr2	stalkie_big_nohaplotig	exon	97488758	97489402	100	-	.	Parent=FBgn0037299.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97488758	97489402	.	-	0	Parent=FBgn0037299.1.mrna1
Chr2	gffcl	locus	97499107	97581777	.	+	.	ID=RLOC_00019773;geneIDs=FBgn0261885.1.path1;transcripts=FBgn0261885.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97499107	97581777	.	+	.	ID=FBgn0261885.1.mrna1;geneID=FBgn0261885.1.path1;Name=FBgn0261885.1;Dir=sensecoverage=100.0;identity=99.9;matches=7325;mismatches=7;indels=0;unknowns=0;locus=RLOC_00019773
Chr2	stalkie_big_nohaplotig	exon	97499107	97499970	99	+	.	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 1 864 +
Chr2	stalkie_big_nohaplotig	exon	97524308	97524538	99	+	.	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 865 1095 +
Chr2	stalkie_big_nohaplotig	exon	97526305	97526496	100	+	.	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 1096 1287 +
Chr2	stalkie_big_nohaplotig	exon	97568877	97569033	100	+	.	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 1288 1444 +
Chr2	stalkie_big_nohaplotig	exon	97569129	97569599	100	+	.	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 1445 1915 +
Chr2	stalkie_big_nohaplotig	exon	97569660	97570346	99	+	.	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 1916 2602 +
Chr2	stalkie_big_nohaplotig	exon	97571357	97571535	100	+	.	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 2603 2781 +
Chr2	stalkie_big_nohaplotig	exon	97571605	97571853	99	+	.	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 2782 3030 +
Chr2	stalkie_big_nohaplotig	exon	97574407	97574623	100	+	.	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 3031 3247 +
Chr2	stalkie_big_nohaplotig	exon	97575700	97575879	100	+	.	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 3248 3427 +
Chr2	stalkie_big_nohaplotig	exon	97577582	97577738	100	+	.	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 3428 3584 +
Chr2	stalkie_big_nohaplotig	exon	97577905	97578115	100	+	.	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 3585 3795 +
Chr2	stalkie_big_nohaplotig	exon	97578180	97578261	100	+	.	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 3796 3877 +
Chr2	stalkie_big_nohaplotig	exon	97578323	97581777	99	+	.	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 3878 7332 +
Chr2	stalkie_big_nohaplotig	CDS	97499107	97499970	.	+	0	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 1 864 +
Chr2	stalkie_big_nohaplotig	CDS	97524308	97524538	.	+	0	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 865 1095 +
Chr2	stalkie_big_nohaplotig	CDS	97526305	97526496	.	+	0	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 1096 1287 +
Chr2	stalkie_big_nohaplotig	CDS	97568877	97569033	.	+	0	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 1288 1444 +
Chr2	stalkie_big_nohaplotig	CDS	97569129	97569599	.	+	2	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 1445 1915 +
Chr2	stalkie_big_nohaplotig	CDS	97569660	97570346	.	+	2	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 1916 2602 +
Chr2	stalkie_big_nohaplotig	CDS	97571357	97571535	.	+	2	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 2603 2781 +
Chr2	stalkie_big_nohaplotig	CDS	97571605	97571853	.	+	0	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 2782 3030 +
Chr2	stalkie_big_nohaplotig	CDS	97574407	97574623	.	+	0	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 3031 3247 +
Chr2	stalkie_big_nohaplotig	CDS	97575700	97575879	.	+	2	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 3248 3427 +
Chr2	stalkie_big_nohaplotig	CDS	97577582	97577738	.	+	2	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 3428 3584 +
Chr2	stalkie_big_nohaplotig	CDS	97577905	97578115	.	+	1	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 3585 3795 +
Chr2	stalkie_big_nohaplotig	CDS	97578180	97578261	.	+	0	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 3796 3877 +
Chr2	stalkie_big_nohaplotig	CDS	97578323	97581777	.	+	2	Parent=FBgn0261885.1.mrna1;Target=FBgn0261885.1 3878 7332 +
Chr2	gffcl	locus	97552221	97552599	.	-	.	ID=RLOC_00019774;geneIDs=comp111031_c0_seq1.path1;transcripts=comp111031_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97552221	97552599	.	-	.	ID=comp111031_c0_seq1.mrna1;geneID=comp111031_c0_seq1.path1;Name=comp111031_c0_seq1;Dir=indeterminatecoverage=94.7;identity=99.7;matches=378;mismatches=0;indels=1;unknowns=0;Target=comp111031_c0_seq1 378 1 .;CDS_Target=comp111031_c0_seq1 194 153 .;locus=RLOC_00019774
Chr2	stalkie_big_nohaplotig	exon	97552221	97552599	99	-	.	Parent=comp111031_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97552406	97552447	.	-	0	Parent=comp111031_c0_seq1.mrna1
Chr2	gffcl	locus	97583600	97584272	.	+	.	ID=RLOC_00019775;geneIDs=comp114834_c0_seq1.path1;transcripts=comp114834_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97583600	97584272	.	+	.	ID=comp114834_c0_seq1.mrna1;geneID=comp114834_c0_seq1.path1;Name=comp114834_c0_seq1;Dir=indeterminatecoverage=97.4;identity=99.9;matches=672;mismatches=1;indels=0;unknowns=0;Target=comp114834_c0_seq1 691 19 .;CDS_Target=comp114834_c0_seq1 576 388 .;locus=RLOC_00019775
Chr2	stalkie_big_nohaplotig	exon	97583600	97584272	99	+	.	Parent=comp114834_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97583969	97584157	.	+	0	Parent=comp114834_c0_seq1.mrna1
Chr2	gffcl	locus	97585110	97586826	.	+	.	ID=RLOC_00019776;geneIDs=comp153012_c0_seq1.path1;transcripts=comp153012_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97585110	97586826	.	+	.	ID=comp153012_c0_seq1.mrna1;geneID=comp153012_c0_seq1.path1;Name=comp153012_c0_seq1;Dir=indeterminatecoverage=98.6;identity=99.7;matches=1716;mismatches=1;indels=4;unknowns=0;Target=comp153012_c0_seq1 1745 25 .;CDS_Target=comp153012_c0_seq1 180 25 .;locus=RLOC_00019776
Chr2	stalkie_big_nohaplotig	exon	97585110	97586826	99	+	.	Parent=comp153012_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97585110	97585265	.	+	0	Parent=comp153012_c0_seq1.mrna1
Chr2	gffcl	locus	97587527	97587837	.	+	.	ID=RLOC_00019777;geneIDs=comp632579_c0_seq1.path1;transcripts=comp632579_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97587527	97587837	.	+	.	ID=comp632579_c0_seq1.mrna1;geneID=comp632579_c0_seq1.path1;Name=comp632579_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=311;mismatches=0;indels=0;unknowns=0;Target=comp632579_c0_seq1 311 1 .;CDS_Target=comp632579_c0_seq1 56 3 .;locus=RLOC_00019777
Chr2	stalkie_big_nohaplotig	exon	97587527	97587837	100	+	.	Parent=comp632579_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97587529	97587582	.	+	0	Parent=comp632579_c0_seq1.mrna1
Chr2	gffcl	locus	97590341	97591057	.	-	.	ID=RLOC_00019778;geneIDs=FBgn0051460.1.path1,comp135789_c0_seq1.path1;transcripts=FBgn0051460.1.mrna1,comp135789_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97590341	97591057	.	-	.	ID=FBgn0051460.1.mrna1;geneID=FBgn0051460.1.path1;Name=FBgn0051460.1;Dir=sensecoverage=100.0;identity=100.0;matches=456;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019778
Chr2	stalkie_big_nohaplotig	exon	97590341	97590464	100	-	.	Parent=FBgn0051460.1.mrna1;Target=FBgn0051460.1 333 456 +
Chr2	stalkie_big_nohaplotig	exon	97590519	97590816	100	-	.	Parent=FBgn0051460.1.mrna1;Target=FBgn0051460.1 35 332 +
Chr2	stalkie_big_nohaplotig	exon	97591024	97591057	100	-	.	Parent=FBgn0051460.1.mrna1;Target=FBgn0051460.1 1 34 +
Chr2	stalkie_big_nohaplotig	CDS	97590341	97590464	.	-	1	Parent=FBgn0051460.1.mrna1;Target=FBgn0051460.1 333 456 +
Chr2	stalkie_big_nohaplotig	CDS	97590519	97590816	.	-	2	Parent=FBgn0051460.1.mrna1;Target=FBgn0051460.1 35 332 +
Chr2	stalkie_big_nohaplotig	CDS	97591024	97591057	.	-	0	Parent=FBgn0051460.1.mrna1;Target=FBgn0051460.1 1 34 +
Chr2	stalkie_big_nohaplotig	mRNA	97590793	97591047	.	-	.	ID=comp135789_c0_seq1.mrna1;geneID=comp135789_c0_seq1.path1;Name=comp135789_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=255;mismatches=0;indels=1;unknowns=0;Target=comp135789_c0_seq1 256 1 .;CDS_Target=comp135789_c0_seq1 177 100 .;locus=RLOC_00019778
Chr2	stalkie_big_nohaplotig	exon	97590793	97591047	99	-	.	Parent=comp135789_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97590871	97590948	.	-	0	Parent=comp135789_c0_seq1.mrna1
Chr2	gffcl	locus	97623830	97632872	.	.	.	ID=RLOC_00019779;geneIDs=FBgn0023023.1.path1,comp147416_c0_seq1.path1,comp160859_c0_seq1.path1;transcripts=FBgn0023023.1.mrna1,comp160859_c0_seq1.mrna1,comp147416_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97623830	97632227	.	+	.	ID=FBgn0023023.1.mrna1;geneID=FBgn0023023.1.path1;Name=FBgn0023023.1;Dir=sensecoverage=99.9;identity=99.9;matches=1815;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019779
Chr2	stalkie_big_nohaplotig	exon	97623830	97623893	100	+	.	Parent=FBgn0023023.1.mrna1;Target=FBgn0023023.1 3 66 +
Chr2	stalkie_big_nohaplotig	exon	97623946	97624040	100	+	.	Parent=FBgn0023023.1.mrna1;Target=FBgn0023023.1 67 161 +
Chr2	stalkie_big_nohaplotig	exon	97626385	97626575	100	+	.	Parent=FBgn0023023.1.mrna1;Target=FBgn0023023.1 162 352 +
Chr2	stalkie_big_nohaplotig	exon	97626637	97626911	100	+	.	Parent=FBgn0023023.1.mrna1;Target=FBgn0023023.1 353 627 +
Chr2	stalkie_big_nohaplotig	exon	97626979	97627125	100	+	.	Parent=FBgn0023023.1.mrna1;Target=FBgn0023023.1 628 774 +
Chr2	stalkie_big_nohaplotig	exon	97628855	97629093	99	+	.	Parent=FBgn0023023.1.mrna1;Target=FBgn0023023.1 775 1013 +
Chr2	stalkie_big_nohaplotig	exon	97631352	97632079	100	+	.	Parent=FBgn0023023.1.mrna1;Target=FBgn0023023.1 1014 1741 +
Chr2	stalkie_big_nohaplotig	exon	97632151	97632227	100	+	.	Parent=FBgn0023023.1.mrna1;Target=FBgn0023023.1 1742 1818 +
Chr2	stalkie_big_nohaplotig	CDS	97623831	97623893	.	+	0	Parent=FBgn0023023.1.mrna1;Target=FBgn0023023.1 4 66 +
Chr2	stalkie_big_nohaplotig	CDS	97623946	97624040	.	+	0	Parent=FBgn0023023.1.mrna1;Target=FBgn0023023.1 67 161 +
Chr2	stalkie_big_nohaplotig	CDS	97626385	97626575	.	+	1	Parent=FBgn0023023.1.mrna1;Target=FBgn0023023.1 162 352 +
Chr2	stalkie_big_nohaplotig	CDS	97626637	97626911	.	+	2	Parent=FBgn0023023.1.mrna1;Target=FBgn0023023.1 353 627 +
Chr2	stalkie_big_nohaplotig	CDS	97626979	97627125	.	+	0	Parent=FBgn0023023.1.mrna1;Target=FBgn0023023.1 628 774 +
Chr2	stalkie_big_nohaplotig	CDS	97628855	97629093	.	+	0	Parent=FBgn0023023.1.mrna1;Target=FBgn0023023.1 775 1013 +
Chr2	stalkie_big_nohaplotig	CDS	97631352	97632079	.	+	1	Parent=FBgn0023023.1.mrna1;Target=FBgn0023023.1 1014 1741 +
Chr2	stalkie_big_nohaplotig	CDS	97632151	97632227	.	+	2	Parent=FBgn0023023.1.mrna1;Target=FBgn0023023.1 1742 1818 +
Chr2	stalkie_big_nohaplotig	mRNA	97623832	97632872	.	+	.	ID=comp160859_c0_seq1.mrna1;geneID=comp160859_c0_seq1.path1;Name=comp160859_c0_seq1;Dir=antisensecoverage=92.2;identity=99.4;matches=4693;mismatches=14;indels=13;unknowns=0;locus=RLOC_00019779
Chr2	stalkie_big_nohaplotig	exon	97623832	97623893	100	+	.	Parent=comp160859_c0_seq1.mrna1;Target=comp160859_c0_seq1 4651 4712 -
Chr2	stalkie_big_nohaplotig	exon	97623946	97624040	100	+	.	Parent=comp160859_c0_seq1.mrna1;Target=comp160859_c0_seq1 4556 4650 -
Chr2	stalkie_big_nohaplotig	exon	97626385	97626575	100	+	.	Parent=comp160859_c0_seq1.mrna1;Target=comp160859_c0_seq1 4365 4555 -
Chr2	stalkie_big_nohaplotig	exon	97626637	97626911	100	+	.	Parent=comp160859_c0_seq1.mrna1;Target=comp160859_c0_seq1 4090 4364 -
Chr2	stalkie_big_nohaplotig	exon	97626979	97627125	100	+	.	Parent=comp160859_c0_seq1.mrna1;Target=comp160859_c0_seq1 3943 4089 -
Chr2	stalkie_big_nohaplotig	exon	97628855	97632079	99	+	.	Parent=comp160859_c0_seq1.mrna1;Target=comp160859_c0_seq1 725 3942 -
Chr2	stalkie_big_nohaplotig	exon	97632151	97632872	100	+	.	Parent=comp160859_c0_seq1.mrna1;Target=comp160859_c0_seq1 3 724 -
Chr2	stalkie_big_nohaplotig	CDS	97623834	97623893	.	+	0	Parent=comp160859_c0_seq1.mrna1;Target=comp160859_c0_seq1 4651 4710 .
Chr2	stalkie_big_nohaplotig	CDS	97623946	97624040	.	+	0	Parent=comp160859_c0_seq1.mrna1;Target=comp160859_c0_seq1 4556 4650 .
Chr2	stalkie_big_nohaplotig	CDS	97626385	97626575	.	+	1	Parent=comp160859_c0_seq1.mrna1;Target=comp160859_c0_seq1 4365 4555 .
Chr2	stalkie_big_nohaplotig	CDS	97626637	97626911	.	+	2	Parent=comp160859_c0_seq1.mrna1;Target=comp160859_c0_seq1 4090 4364 .
Chr2	stalkie_big_nohaplotig	CDS	97626979	97627125	.	+	0	Parent=comp160859_c0_seq1.mrna1;Target=comp160859_c0_seq1 3943 4089 .
Chr2	stalkie_big_nohaplotig	CDS	97628855	97629097	.	+	0	Parent=comp160859_c0_seq1.mrna1;Target=comp160859_c0_seq1 3700 3942 .
Chr2	stalkie_big_nohaplotig	mRNA	97627104	97627579	.	-	.	ID=comp147416_c0_seq1.mrna1;geneID=comp147416_c0_seq1.path1;Name=comp147416_c0_seq1;Dir=indeterminatecoverage=98.8;identity=97.7;matches=465;mismatches=11;indels=0;unknowns=0;Target=comp147416_c0_seq1 482 7 .;CDS_Target=comp147416_c0_seq1 232 155 .;locus=RLOC_00019779
Chr2	stalkie_big_nohaplotig	exon	97627104	97627579	97	-	.	Parent=comp147416_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97627354	97627431	.	-	0	Parent=comp147416_c0_seq1.mrna1
Chr2	gffcl	locus	97636588	97643315	.	+	.	ID=RLOC_00019780;geneIDs=FBgn0032470.1.path1;transcripts=FBgn0032470.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97636588	97643315	.	+	.	ID=FBgn0032470.1.mrna1;geneID=FBgn0032470.1.path1;Name=FBgn0032470.1;Dir=sensecoverage=100.0;identity=99.8;matches=2035;mismatches=4;indels=0;unknowns=13;locus=RLOC_00019780
Chr2	stalkie_big_nohaplotig	exon	97636588	97636651	100	+	.	Parent=FBgn0032470.1.mrna1;Target=FBgn0032470.1 1 64 +
Chr2	stalkie_big_nohaplotig	exon	97636757	97636848	98	+	.	Parent=FBgn0032470.1.mrna1;Target=FBgn0032470.1 65 156 +
Chr2	stalkie_big_nohaplotig	exon	97636923	97637101	100	+	.	Parent=FBgn0032470.1.mrna1;Target=FBgn0032470.1 157 335 +
Chr2	stalkie_big_nohaplotig	exon	97637171	97637529	99	+	.	Parent=FBgn0032470.1.mrna1;Target=FBgn0032470.1 336 694 +
Chr2	stalkie_big_nohaplotig	exon	97637938	97638105	100	+	.	Parent=FBgn0032470.1.mrna1;Target=FBgn0032470.1 695 862 +
Chr2	stalkie_big_nohaplotig	exon	97639684	97639955	100	+	.	Parent=FBgn0032470.1.mrna1;Target=FBgn0032470.1 863 1134 +
Chr2	stalkie_big_nohaplotig	exon	97640031	97640227	100	+	.	Parent=FBgn0032470.1.mrna1;Target=FBgn0032470.1 1135 1331 +
Chr2	stalkie_big_nohaplotig	exon	97640301	97640511	100	+	.	Parent=FBgn0032470.1.mrna1;Target=FBgn0032470.1 1332 1542 +
Chr2	stalkie_big_nohaplotig	exon	97640575	97640956	99	+	.	Parent=FBgn0032470.1.mrna1;Target=FBgn0032470.1 1543 1924 +
Chr2	stalkie_big_nohaplotig	exon	97643188	97643315	100	+	.	Parent=FBgn0032470.1.mrna1;Target=FBgn0032470.1 1925 2052 +
Chr2	stalkie_big_nohaplotig	CDS	97636588	97636651	.	+	0	Parent=FBgn0032470.1.mrna1;Target=FBgn0032470.1 1 64 +
Chr2	stalkie_big_nohaplotig	CDS	97636757	97636848	.	+	2	Parent=FBgn0032470.1.mrna1;Target=FBgn0032470.1 65 156 +
Chr2	stalkie_big_nohaplotig	CDS	97636923	97637101	.	+	0	Parent=FBgn0032470.1.mrna1;Target=FBgn0032470.1 157 335 +
Chr2	stalkie_big_nohaplotig	CDS	97637171	97637529	.	+	1	Parent=FBgn0032470.1.mrna1;Target=FBgn0032470.1 336 694 +
Chr2	stalkie_big_nohaplotig	CDS	97637938	97638105	.	+	2	Parent=FBgn0032470.1.mrna1;Target=FBgn0032470.1 695 862 +
Chr2	stalkie_big_nohaplotig	CDS	97639684	97639955	.	+	2	Parent=FBgn0032470.1.mrna1;Target=FBgn0032470.1 863 1134 +
Chr2	stalkie_big_nohaplotig	CDS	97640031	97640227	.	+	0	Parent=FBgn0032470.1.mrna1;Target=FBgn0032470.1 1135 1331 +
Chr2	stalkie_big_nohaplotig	CDS	97640301	97640511	.	+	1	Parent=FBgn0032470.1.mrna1;Target=FBgn0032470.1 1332 1542 +
Chr2	stalkie_big_nohaplotig	CDS	97640575	97640956	.	+	0	Parent=FBgn0032470.1.mrna1;Target=FBgn0032470.1 1543 1924 +
Chr2	stalkie_big_nohaplotig	CDS	97643188	97643315	.	+	2	Parent=FBgn0032470.1.mrna1;Target=FBgn0032470.1 1925 2052 +
Chr2	gffcl	locus	97643699	97646667	.	-	.	ID=RLOC_00019781;geneIDs=FBgn0260462.2.path1,comp153815_c0_seq1.path1;transcripts=FBgn0260462.2.mrna1,comp153815_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97643699	97646667	.	-	.	ID=FBgn0260462.2.mrna1;geneID=FBgn0260462.2.path1;Name=FBgn0260462.2;Dir=sensecoverage=92.0;identity=100.0;matches=1317;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019781
Chr2	stalkie_big_nohaplotig	exon	97643699	97643967	100	-	.	Parent=FBgn0260462.2.mrna1;Target=FBgn0260462.2 1163 1431 +
Chr2	stalkie_big_nohaplotig	exon	97644111	97644289	100	-	.	Parent=FBgn0260462.2.mrna1;Target=FBgn0260462.2 984 1162 +
Chr2	stalkie_big_nohaplotig	exon	97645612	97645784	100	-	.	Parent=FBgn0260462.2.mrna1;Target=FBgn0260462.2 811 983 +
Chr2	stalkie_big_nohaplotig	exon	97645840	97646015	100	-	.	Parent=FBgn0260462.2.mrna1;Target=FBgn0260462.2 635 810 +
Chr2	stalkie_big_nohaplotig	exon	97646080	97646468	100	-	.	Parent=FBgn0260462.2.mrna1;Target=FBgn0260462.2 246 634 +
Chr2	stalkie_big_nohaplotig	exon	97646537	97646667	100	-	.	Parent=FBgn0260462.2.mrna1;Target=FBgn0260462.2 115 245 +
Chr2	stalkie_big_nohaplotig	CDS	97643699	97643967	.	-	2	Parent=FBgn0260462.2.mrna1;Target=FBgn0260462.2 1163 1431 +
Chr2	stalkie_big_nohaplotig	CDS	97644111	97644289	.	-	1	Parent=FBgn0260462.2.mrna1;Target=FBgn0260462.2 984 1162 +
Chr2	stalkie_big_nohaplotig	CDS	97645612	97645784	.	-	0	Parent=FBgn0260462.2.mrna1;Target=FBgn0260462.2 811 983 +
Chr2	stalkie_big_nohaplotig	CDS	97645840	97646015	.	-	2	Parent=FBgn0260462.2.mrna1;Target=FBgn0260462.2 635 810 +
Chr2	stalkie_big_nohaplotig	CDS	97646080	97646468	.	-	1	Parent=FBgn0260462.2.mrna1;Target=FBgn0260462.2 246 634 +
Chr2	stalkie_big_nohaplotig	CDS	97646537	97646667	.	-	0	Parent=FBgn0260462.2.mrna1;Target=FBgn0260462.2 115 245 +
Chr2	stalkie_big_nohaplotig	mRNA	97644267	97645634	.	-	.	ID=comp153815_c0_seq1.mrna1;geneID=comp153815_c0_seq1.path1;Name=comp153815_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1362;mismatches=6;indels=1;unknowns=0;Target=comp153815_c0_seq1 1369 1 .;CDS_Target=comp153815_c0_seq1 846 682 .;locus=RLOC_00019781
Chr2	stalkie_big_nohaplotig	exon	97644267	97645634	99	-	.	Parent=comp153815_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97644789	97644953	.	-	0	Parent=comp153815_c0_seq1.mrna1
Chr2	gffcl	locus	97651847	97653039	.	.	.	ID=RLOC_00019782;geneIDs=FBgn0260462.1.path1,comp734499_c0_seq1.path1;transcripts=FBgn0260462.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97651847	97652650	.	-	.	ID=FBgn0260462.1.mrna1;geneID=FBgn0260462.1.path1;Name=FBgn0260462.1;Dir=indeterminatecoverage=97.5;identity=100.0;matches=804;mismatches=0;indels=0;unknowns=0;Target=FBgn0260462.1 825 22 .;locus=RLOC_00019782
Chr2	stalkie_big_nohaplotig	exon	97651847	97652650	100	-	.	Parent=FBgn0260462.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97651847	97652650	.	-	0	Parent=FBgn0260462.1.mrna1
Chr2	gffcl	locus	97655556	97655948	.	+	.	ID=RLOC_00019783;geneIDs=comp75548_c0_seq1.path1;transcripts=comp75548_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97655556	97655948	.	+	.	ID=comp75548_c0_seq1.mrna1;geneID=comp75548_c0_seq1.path1;Name=comp75548_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=392;mismatches=1;indels=0;unknowns=0;Target=comp75548_c0_seq1 393 1 .;CDS_Target=comp75548_c0_seq1 393 310 .;locus=RLOC_00019783
Chr2	stalkie_big_nohaplotig	exon	97655556	97655948	99	+	.	Parent=comp75548_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97655865	97655948	.	+	0	Parent=comp75548_c0_seq1.mrna1
Chr2	gffcl	locus	97661129	97662052	.	+	.	ID=RLOC_00019784;geneIDs=comp147097_c0_seq1.path1;transcripts=comp147097_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97661129	97662052	.	+	.	ID=comp147097_c0_seq1.mrna1;geneID=comp147097_c0_seq1.path1;Name=comp147097_c0_seq1;Dir=indeterminatecoverage=98.7;identity=99.8;matches=922;mismatches=2;indels=0;unknowns=0;Target=comp147097_c0_seq1 936 13 .;CDS_Target=comp147097_c0_seq1 612 445 .;locus=RLOC_00019784
Chr2	stalkie_big_nohaplotig	exon	97661129	97662052	99	+	.	Parent=comp147097_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97661561	97661728	.	+	0	Parent=comp147097_c0_seq1.mrna1
Chr2	gffcl	locus	97666501	97668553	.	+	.	ID=RLOC_00019785;geneIDs=comp149567_c2_seq1.path1;transcripts=comp149567_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97666501	97668553	.	+	.	ID=comp149567_c2_seq1.mrna1;geneID=comp149567_c2_seq1.path1;Name=comp149567_c2_seq1;Dir=indeterminatecoverage=100.0;identity=96.4;matches=1488;mismatches=26;indels=29;unknowns=0;Target=comp149567_c2_seq1 199 152 .;locus=RLOC_00019785
Chr2	stalkie_big_nohaplotig	exon	97666501	97666605	85	+	.	Parent=comp149567_c2_seq1.mrna1;Target=comp149567_c2_seq1 113 1 .
Chr2	stalkie_big_nohaplotig	exon	97667016	97667927	96	+	.	Parent=comp149567_c2_seq1.mrna1;Target=comp149567_c2_seq1 1042 114 .
Chr2	stalkie_big_nohaplotig	exon	97668055	97668553	98	+	.	Parent=comp149567_c2_seq1.mrna1;Target=comp149567_c2_seq1 1541 1043 .
Chr2	stalkie_big_nohaplotig	CDS	97667054	97667085	.	+	0	Parent=comp149567_c2_seq1.mrna1
Chr2	gffcl	locus	97679019	97685089	.	-	.	ID=RLOC_00019786;geneIDs=FBgn0038320.1.path1;transcripts=FBgn0038320.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97679019	97685089	.	-	.	ID=FBgn0038320.1.mrna1;geneID=FBgn0038320.1.path1;Name=FBgn0038320.1;Dir=sensecoverage=100.0;identity=99.4;matches=3863;mismatches=25;indels=0;unknowns=0;locus=RLOC_00019786
Chr2	stalkie_big_nohaplotig	exon	97679019	97679222	98	-	.	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 3685 3888 +
Chr2	stalkie_big_nohaplotig	exon	97679293	97679679	99	-	.	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 3298 3684 +
Chr2	stalkie_big_nohaplotig	exon	97680970	97681064	98	-	.	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 3203 3297 +
Chr2	stalkie_big_nohaplotig	exon	97681137	97681672	99	-	.	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 2667 3202 +
Chr2	stalkie_big_nohaplotig	exon	97681943	97682142	100	-	.	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 2467 2666 +
Chr2	stalkie_big_nohaplotig	exon	97682252	97682364	100	-	.	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 2354 2466 +
Chr2	stalkie_big_nohaplotig	exon	97682428	97682546	100	-	.	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 2235 2353 +
Chr2	stalkie_big_nohaplotig	exon	97682606	97682779	100	-	.	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 2061 2234 +
Chr2	stalkie_big_nohaplotig	exon	97682843	97683510	99	-	.	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 1393 2060 +
Chr2	stalkie_big_nohaplotig	exon	97683571	97684554	99	-	.	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 409 1392 +
Chr2	stalkie_big_nohaplotig	exon	97684622	97684801	100	-	.	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 229 408 +
Chr2	stalkie_big_nohaplotig	exon	97684862	97685089	98	-	.	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 1 228 +
Chr2	stalkie_big_nohaplotig	CDS	97679019	97679222	.	-	0	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 3685 3888 +
Chr2	stalkie_big_nohaplotig	CDS	97679293	97679679	.	-	0	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 3298 3684 +
Chr2	stalkie_big_nohaplotig	CDS	97680970	97681064	.	-	2	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 3203 3297 +
Chr2	stalkie_big_nohaplotig	CDS	97681137	97681672	.	-	1	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 2667 3202 +
Chr2	stalkie_big_nohaplotig	CDS	97681943	97682142	.	-	0	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 2467 2666 +
Chr2	stalkie_big_nohaplotig	CDS	97682252	97682364	.	-	2	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 2354 2466 +
Chr2	stalkie_big_nohaplotig	CDS	97682428	97682546	.	-	1	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 2235 2353 +
Chr2	stalkie_big_nohaplotig	CDS	97682606	97682779	.	-	1	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 2061 2234 +
Chr2	stalkie_big_nohaplotig	CDS	97682843	97683510	.	-	0	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 1393 2060 +
Chr2	stalkie_big_nohaplotig	CDS	97683571	97684554	.	-	0	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 409 1392 +
Chr2	stalkie_big_nohaplotig	CDS	97684622	97684801	.	-	0	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 229 408 +
Chr2	stalkie_big_nohaplotig	CDS	97684862	97685089	.	-	0	Parent=FBgn0038320.1.mrna1;Target=FBgn0038320.1 1 228 +
Chr2	gffcl	locus	97687173	97688810	.	+	.	ID=RLOC_00019787;geneIDs=FBgn0038055.1.path1;transcripts=FBgn0038055.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97687173	97688810	.	+	.	ID=FBgn0038055.1.mrna1;geneID=FBgn0038055.1.path1;Name=FBgn0038055.1;Dir=sensecoverage=100.0;identity=99.6;matches=1461;mismatches=6;indels=0;unknowns=0;locus=RLOC_00019787
Chr2	stalkie_big_nohaplotig	exon	97687173	97687283	100	+	.	Parent=FBgn0038055.1.mrna1;Target=FBgn0038055.1 1 111 +
Chr2	stalkie_big_nohaplotig	exon	97687394	97688496	99	+	.	Parent=FBgn0038055.1.mrna1;Target=FBgn0038055.1 112 1214 +
Chr2	stalkie_big_nohaplotig	exon	97688558	97688810	100	+	.	Parent=FBgn0038055.1.mrna1;Target=FBgn0038055.1 1215 1467 +
Chr2	stalkie_big_nohaplotig	CDS	97687173	97687283	.	+	0	Parent=FBgn0038055.1.mrna1;Target=FBgn0038055.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	97687394	97688496	.	+	0	Parent=FBgn0038055.1.mrna1;Target=FBgn0038055.1 112 1214 +
Chr2	stalkie_big_nohaplotig	CDS	97688558	97688810	.	+	1	Parent=FBgn0038055.1.mrna1;Target=FBgn0038055.1 1215 1467 +
Chr2	gffcl	locus	97691905	97693614	.	-	.	ID=RLOC_00019788;geneIDs=FBgn0038056.1.path1;transcripts=FBgn0038056.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97691905	97693614	.	-	.	ID=FBgn0038056.1.mrna1;geneID=FBgn0038056.1.path1;Name=FBgn0038056.1;Dir=sensecoverage=100.0;identity=99.7;matches=1450;mismatches=5;indels=0;unknowns=0;locus=RLOC_00019788
Chr2	stalkie_big_nohaplotig	exon	97691905	97692589	99	-	.	Parent=FBgn0038056.1.mrna1;Target=FBgn0038056.1 771 1455 +
Chr2	stalkie_big_nohaplotig	exon	97692788	97693540	99	-	.	Parent=FBgn0038056.1.mrna1;Target=FBgn0038056.1 18 770 +
Chr2	stalkie_big_nohaplotig	exon	97693598	97693614	100	-	.	Parent=FBgn0038056.1.mrna1;Target=FBgn0038056.1 1 17 +
Chr2	stalkie_big_nohaplotig	CDS	97691905	97692589	.	-	1	Parent=FBgn0038056.1.mrna1;Target=FBgn0038056.1 771 1455 +
Chr2	stalkie_big_nohaplotig	CDS	97692788	97693540	.	-	1	Parent=FBgn0038056.1.mrna1;Target=FBgn0038056.1 18 770 +
Chr2	stalkie_big_nohaplotig	CDS	97693598	97693614	.	-	0	Parent=FBgn0038056.1.mrna1;Target=FBgn0038056.1 1 17 +
Chr2	gffcl	locus	97695972	97697010	.	+	.	ID=RLOC_00019789;geneIDs=FBgn0027526.1.path1;transcripts=FBgn0027526.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97695972	97697010	.	+	.	ID=FBgn0027526.1.mrna1;geneID=FBgn0027526.1.path1;Name=FBgn0027526.1;Dir=sensecoverage=100.0;identity=99.7;matches=981;mismatches=3;indels=0;unknowns=0;locus=RLOC_00019789
Chr2	stalkie_big_nohaplotig	exon	97695972	97696158	99	+	.	Parent=FBgn0027526.1.mrna1;Target=FBgn0027526.1 1 187 +
Chr2	stalkie_big_nohaplotig	exon	97696214	97697010	99	+	.	Parent=FBgn0027526.1.mrna1;Target=FBgn0027526.1 188 984 +
Chr2	stalkie_big_nohaplotig	CDS	97695972	97696158	.	+	0	Parent=FBgn0027526.1.mrna1;Target=FBgn0027526.1 1 187 +
Chr2	stalkie_big_nohaplotig	CDS	97696214	97697010	.	+	2	Parent=FBgn0027526.1.mrna1;Target=FBgn0027526.1 188 984 +
Chr2	gffcl	locus	97699137	97702782	.	-	.	ID=RLOC_00019790;geneIDs=FBgn0039048.path1,comp162101_c0_seq1.path1;transcripts=FBgn0039048.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97699137	97702782	.	-	.	ID=FBgn0039048.mrna1;geneID=FBgn0039048.path1;Name=FBgn0039048;Dir=sensecoverage=99.9;identity=99.5;matches=1374;mismatches=7;indels=0;unknowns=1;locus=RLOC_00019790
Chr2	stalkie_big_nohaplotig	exon	97699137	97699244	99	-	.	Parent=FBgn0039048.mrna1;Target=FBgn0039048 1275 1382 +
Chr2	stalkie_big_nohaplotig	exon	97699309	97699497	98	-	.	Parent=FBgn0039048.mrna1;Target=FBgn0039048 1086 1274 +
Chr2	stalkie_big_nohaplotig	exon	97699561	97699774	99	-	.	Parent=FBgn0039048.mrna1;Target=FBgn0039048 872 1085 +
Chr2	stalkie_big_nohaplotig	exon	97701087	97701267	99	-	.	Parent=FBgn0039048.mrna1;Target=FBgn0039048 691 871 +
Chr2	stalkie_big_nohaplotig	exon	97701389	97701623	100	-	.	Parent=FBgn0039048.mrna1;Target=FBgn0039048 456 690 +
Chr2	stalkie_big_nohaplotig	exon	97702243	97702432	99	-	.	Parent=FBgn0039048.mrna1;Target=FBgn0039048 266 455 +
Chr2	stalkie_big_nohaplotig	exon	97702518	97702782	99	-	.	Parent=FBgn0039048.mrna1;Target=FBgn0039048 1 265 +
Chr2	stalkie_big_nohaplotig	CDS	97699139	97699244	.	-	1	Parent=FBgn0039048.mrna1;Target=FBgn0039048 1275 1380 +
Chr2	stalkie_big_nohaplotig	CDS	97699309	97699497	.	-	1	Parent=FBgn0039048.mrna1;Target=FBgn0039048 1086 1274 +
Chr2	stalkie_big_nohaplotig	CDS	97699561	97699774	.	-	2	Parent=FBgn0039048.mrna1;Target=FBgn0039048 872 1085 +
Chr2	stalkie_big_nohaplotig	CDS	97701087	97701267	.	-	0	Parent=FBgn0039048.mrna1;Target=FBgn0039048 691 871 +
Chr2	stalkie_big_nohaplotig	CDS	97701389	97701623	.	-	1	Parent=FBgn0039048.mrna1;Target=FBgn0039048 456 690 +
Chr2	stalkie_big_nohaplotig	CDS	97702243	97702432	.	-	2	Parent=FBgn0039048.mrna1;Target=FBgn0039048 266 455 +
Chr2	stalkie_big_nohaplotig	CDS	97702518	97702782	.	-	0	Parent=FBgn0039048.mrna1;Target=FBgn0039048 1 265 +
Chr2	gffcl	locus	97719643	99679188	.	+	.	ID=RLOC_00019791;geneIDs=comp156832_c0_seq1.path1;transcripts=comp156832_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97719643	99679188	.	+	.	ID=comp156832_c0_seq1.mrna1;geneID=comp156832_c0_seq1.path1;Name=comp156832_c0_seq1;Dir=indeterminatecoverage=76.5;identity=91.7;matches=498;mismatches=13;indels=32;unknowns=0;Target=comp156832_c0_seq1 336 130 .;locus=RLOC_00019791
Chr2	stalkie_big_nohaplotig	exon	97719643	97720078	97	+	.	Parent=comp156832_c0_seq1.mrna1;Target=comp156832_c0_seq1 453 14 .
Chr2	stalkie_big_nohaplotig	exon	99215515	99215521	100	+	.	Parent=comp156832_c0_seq1.mrna1;Target=comp156832_c0_seq1 462 456 .
Chr2	stalkie_big_nohaplotig	exon	99216777	99216778	100	+	.	Parent=comp156832_c0_seq1.mrna1;Target=comp156832_c0_seq1 464 463 .
Chr2	stalkie_big_nohaplotig	exon	99222228	99222233	100	+	.	Parent=comp156832_c0_seq1.mrna1;Target=comp156832_c0_seq1 470 465 .
Chr2	stalkie_big_nohaplotig	exon	99230104	99230115	100	+	.	Parent=comp156832_c0_seq1.mrna1;Target=comp156832_c0_seq1 482 471 .
Chr2	stalkie_big_nohaplotig	exon	99650517	99650525	11	+	.	Parent=comp156832_c0_seq1.mrna1;Target=comp156832_c0_seq1 488 487 .
Chr2	stalkie_big_nohaplotig	exon	99658107	99658116	100	+	.	Parent=comp156832_c0_seq1.mrna1;Target=comp156832_c0_seq1 500 491 .
Chr2	stalkie_big_nohaplotig	exon	99672028	99672052	45	+	.	Parent=comp156832_c0_seq1.mrna1;Target=comp156832_c0_seq1 546 501 .
Chr2	stalkie_big_nohaplotig	exon	99676400	99676401	100	+	.	Parent=comp156832_c0_seq1.mrna1;Target=comp156832_c0_seq1 607 606 .
Chr2	stalkie_big_nohaplotig	exon	99679182	99679188	100	+	.	Parent=comp156832_c0_seq1.mrna1;Target=comp156832_c0_seq1 614 608 .
Chr2	stalkie_big_nohaplotig	CDS	97719759	97719961	.	+	0	Parent=comp156832_c0_seq1.mrna1
Chr2	gffcl	locus	97720481	97720954	.	-	.	ID=RLOC_00019792;geneIDs=comp152977_c0_seq1.path2;transcripts=comp152977_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	97720481	97720954	.	-	.	ID=comp152977_c0_seq1.mrna2;geneID=comp152977_c0_seq1.path2;Name=comp152977_c0_seq1;Dir=indeterminatecoverage=83.7;identity=98.3;matches=466;mismatches=8;indels=0;unknowns=0;Target=comp152977_c0_seq1 561 88 .;CDS_Target=comp152977_c0_seq1 561 472 .;locus=RLOC_00019792
Chr2	stalkie_big_nohaplotig	exon	97720481	97720954	98	-	.	Parent=comp152977_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	97720481	97720570	.	-	0	Parent=comp152977_c0_seq1.mrna2
Chr2	gffcl	locus	97721640	97721860	.	-	.	ID=RLOC_00019793;geneIDs=comp160161_c0_seq1.path1;transcripts=comp160161_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97721640	97721860	.	-	.	ID=comp160161_c0_seq1.mrna1;geneID=comp160161_c0_seq1.path1;Name=comp160161_c0_seq1;Dir=indeterminatecoverage=94.0;identity=95.0;matches=210;mismatches=9;indels=2;unknowns=0;Target=comp160161_c0_seq1 233 15 .;CDS_Target=comp160161_c0_seq1 92 15 .;locus=RLOC_00019793
Chr2	stalkie_big_nohaplotig	exon	97721640	97721860	95	-	.	Parent=comp160161_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97721783	97721860	.	-	0	Parent=comp160161_c0_seq1.mrna1
Chr2	gffcl	locus	97723373	97733296	.	-	.	ID=RLOC_00019794;geneIDs=FBgn0039054.path1;transcripts=FBgn0039054.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97723373	97733296	.	-	.	ID=FBgn0039054.mrna1;geneID=FBgn0039054.path1;Name=FBgn0039054;Dir=sensecoverage=100.0;identity=99.9;matches=926;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019794
Chr2	stalkie_big_nohaplotig	exon	97723373	97723476	100	-	.	Parent=FBgn0039054.mrna1;Target=FBgn0039054 824 927 +
Chr2	stalkie_big_nohaplotig	exon	97726574	97726711	100	-	.	Parent=FBgn0039054.mrna1;Target=FBgn0039054 686 823 +
Chr2	stalkie_big_nohaplotig	exon	97727159	97727554	99	-	.	Parent=FBgn0039054.mrna1;Target=FBgn0039054 290 685 +
Chr2	stalkie_big_nohaplotig	exon	97727615	97727714	100	-	.	Parent=FBgn0039054.mrna1;Target=FBgn0039054 190 289 +
Chr2	stalkie_big_nohaplotig	exon	97728218	97728337	100	-	.	Parent=FBgn0039054.mrna1;Target=FBgn0039054 70 189 +
Chr2	stalkie_big_nohaplotig	exon	97733228	97733296	100	-	.	Parent=FBgn0039054.mrna1;Target=FBgn0039054 1 69 +
Chr2	stalkie_big_nohaplotig	CDS	97723373	97723476	.	-	2	Parent=FBgn0039054.mrna1;Target=FBgn0039054 824 927 +
Chr2	stalkie_big_nohaplotig	CDS	97726574	97726711	.	-	2	Parent=FBgn0039054.mrna1;Target=FBgn0039054 686 823 +
Chr2	stalkie_big_nohaplotig	CDS	97727159	97727554	.	-	2	Parent=FBgn0039054.mrna1;Target=FBgn0039054 290 685 +
Chr2	stalkie_big_nohaplotig	CDS	97727615	97727714	.	-	0	Parent=FBgn0039054.mrna1;Target=FBgn0039054 190 289 +
Chr2	stalkie_big_nohaplotig	CDS	97728218	97728337	.	-	0	Parent=FBgn0039054.mrna1;Target=FBgn0039054 70 189 +
Chr2	stalkie_big_nohaplotig	CDS	97733228	97733296	.	-	0	Parent=FBgn0039054.mrna1;Target=FBgn0039054 1 69 +
Chr2	gffcl	locus	97840054	97840894	.	-	.	ID=RLOC_00019795;geneIDs=ORF2872.path1;transcripts=ORF2872.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97840054	97840894	.	-	.	ID=ORF2872.mrna1;geneID=ORF2872.path1;Name=ORF2872;Dir=sensecoverage=97.2;identity=100.0;matches=773;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019795
Chr2	stalkie_big_nohaplotig	exon	97840054	97840632	100	-	.	Parent=ORF2872.mrna1;Target=ORF2872 217 795 +
Chr2	stalkie_big_nohaplotig	exon	97840701	97840894	100	-	.	Parent=ORF2872.mrna1;Target=ORF2872 23 216 +
Chr2	stalkie_big_nohaplotig	CDS	97840054	97840632	.	-	0	Parent=ORF2872.mrna1;Target=ORF2872 217 795 +
Chr2	stalkie_big_nohaplotig	CDS	97840701	97840892	.	-	0	Parent=ORF2872.mrna1;Target=ORF2872 25 216 +
Chr2	gffcl	locus	97841407	97842924	.	+	.	ID=RLOC_00019796;geneIDs=comp117606_c0_seq1.path1;transcripts=comp117606_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97841407	97842924	.	+	.	ID=comp117606_c0_seq1.mrna1;geneID=comp117606_c0_seq1.path1;Name=comp117606_c0_seq1;Dir=sensecoverage=99.8;identity=99.9;matches=1380;mismatches=1;indels=0;unknowns=0;Target=comp117606_c0_seq1 547 762 +;locus=RLOC_00019796
Chr2	stalkie_big_nohaplotig	exon	97841407	97842247	100	+	.	Parent=comp117606_c0_seq1.mrna1;Target=comp117606_c0_seq1 2 842 +
Chr2	stalkie_big_nohaplotig	exon	97842385	97842924	99	+	.	Parent=comp117606_c0_seq1.mrna1;Target=comp117606_c0_seq1 843 1382 +
Chr2	stalkie_big_nohaplotig	CDS	97841952	97842167	.	+	0	Parent=comp117606_c0_seq1.mrna1
Chr2	gffcl	locus	97844830	99816678	.	-	.	ID=RLOC_00019797;geneIDs=comp113491_c0_seq1.path1;transcripts=comp113491_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97844830	99816678	.	-	.	ID=comp113491_c0_seq1.mrna1;geneID=comp113491_c0_seq1.path1;Name=comp113491_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.7;matches=718;mismatches=1;indels=1;unknowns=0;Target=comp113491_c0_seq1 578 495 .;locus=RLOC_00019797
Chr2	stalkie_big_nohaplotig	exon	97844830	97844845	100	-	.	Parent=comp113491_c0_seq1.mrna1;Target=comp113491_c0_seq1 721 706 .
Chr2	stalkie_big_nohaplotig	exon	97849195	97849196	100	-	.	Parent=comp113491_c0_seq1.mrna1;Target=comp113491_c0_seq1 705 704 .
Chr2	stalkie_big_nohaplotig	exon	97850550	97850551	100	-	.	Parent=comp113491_c0_seq1.mrna1;Target=comp113491_c0_seq1 703 702 .
Chr2	stalkie_big_nohaplotig	exon	97851099	97851102	100	-	.	Parent=comp113491_c0_seq1.mrna1;Target=comp113491_c0_seq1 701 698 .
Chr2	stalkie_big_nohaplotig	exon	97859070	97859079	100	-	.	Parent=comp113491_c0_seq1.mrna1;Target=comp113491_c0_seq1 697 688 .
Chr2	stalkie_big_nohaplotig	exon	97866527	97866530	100	-	.	Parent=comp113491_c0_seq1.mrna1;Target=comp113491_c0_seq1 687 684 .
Chr2	stalkie_big_nohaplotig	exon	97869283	97869288	100	-	.	Parent=comp113491_c0_seq1.mrna1;Target=comp113491_c0_seq1 683 678 .
Chr2	stalkie_big_nohaplotig	exon	97874985	97874992	100	-	.	Parent=comp113491_c0_seq1.mrna1;Target=comp113491_c0_seq1 677 670 .
Chr2	stalkie_big_nohaplotig	exon	97876675	97876679	100	-	.	Parent=comp113491_c0_seq1.mrna1;Target=comp113491_c0_seq1 669 665 .
Chr2	stalkie_big_nohaplotig	exon	99816017	99816678	99	-	.	Parent=comp113491_c0_seq1.mrna1;Target=comp113491_c0_seq1 664 2 .
Chr2	stalkie_big_nohaplotig	CDS	99816103	99816185	.	-	0	Parent=comp113491_c0_seq1.mrna1
Chr2	gffcl	locus	97869416	97869976	.	+	.	ID=RLOC_00019798;geneIDs=comp149949_c0_seq1.path1;transcripts=comp149949_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97869416	97869976	.	+	.	ID=comp149949_c0_seq1.mrna1;geneID=comp149949_c0_seq1.path1;Name=comp149949_c0_seq1;Dir=indeterminatecoverage=96.8;identity=97.6;matches=560;mismatches=1;indels=13;unknowns=0;Target=comp149949_c0_seq1 593 20 .;CDS_Target=comp149949_c0_seq1 140 21 .;locus=RLOC_00019798
Chr2	stalkie_big_nohaplotig	exon	97869416	97869976	97	+	.	Parent=comp149949_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97869417	97869536	.	+	0	Parent=comp149949_c0_seq1.mrna1
Chr2	gffcl	locus	97927317	97935258	.	+	.	ID=RLOC_00019799;geneIDs=FBgn0013576.1.path2,comp128917_c0_seq1.path1;transcripts=comp128917_c0_seq1.mrna1,FBgn0013576.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	97927317	97932393	.	+	.	ID=comp128917_c0_seq1.mrna1;geneID=comp128917_c0_seq1.path1;Name=comp128917_c0_seq1;Dir=sensecoverage=93.1;identity=99.4;matches=307;mismatches=1;indels=1;unknowns=0;locus=RLOC_00019799
Chr2	stalkie_big_nohaplotig	exon	97927317	97927601	99	+	.	Parent=comp128917_c0_seq1.mrna1;Target=comp128917_c0_seq1 24 309 +
Chr2	stalkie_big_nohaplotig	exon	97932371	97932393	100	+	.	Parent=comp128917_c0_seq1.mrna1;Target=comp128917_c0_seq1 310 332 +
Chr2	stalkie_big_nohaplotig	CDS	97927479	97927601	.	+	0	Parent=comp128917_c0_seq1.mrna1;Target=comp128917_c0_seq1 187 309 +
Chr2	stalkie_big_nohaplotig	CDS	97932371	97932391	.	+	0	Parent=comp128917_c0_seq1.mrna1;Target=comp128917_c0_seq1 310 330 +
Chr2	stalkie_big_nohaplotig	mRNA	97932371	97935258	.	+	.	ID=FBgn0013576.1.mrna2;geneID=FBgn0013576.1.path2;Name=FBgn0013576.1;Dir=sensecoverage=15.3;identity=100.0;matches=579;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019799
Chr2	stalkie_big_nohaplotig	exon	97932371	97932486	100	+	.	Parent=FBgn0013576.1.mrna2;Target=FBgn0013576.1 3196 3311 +
Chr2	stalkie_big_nohaplotig	exon	97934322	97934481	100	+	.	Parent=FBgn0013576.1.mrna2;Target=FBgn0013576.1 3312 3471 +
Chr2	stalkie_big_nohaplotig	exon	97934888	97935057	100	+	.	Parent=FBgn0013576.1.mrna2;Target=FBgn0013576.1 3472 3641 +
Chr2	stalkie_big_nohaplotig	exon	97935126	97935258	100	+	.	Parent=FBgn0013576.1.mrna2;Target=FBgn0013576.1 3642 3774 +
Chr2	stalkie_big_nohaplotig	CDS	97932371	97932486	.	+	0	Parent=FBgn0013576.1.mrna2;Target=FBgn0013576.1 3196 3311 +
Chr2	stalkie_big_nohaplotig	CDS	97934322	97934481	.	+	1	Parent=FBgn0013576.1.mrna2;Target=FBgn0013576.1 3312 3471 +
Chr2	stalkie_big_nohaplotig	CDS	97934888	97935057	.	+	0	Parent=FBgn0013576.1.mrna2;Target=FBgn0013576.1 3472 3641 +
Chr2	stalkie_big_nohaplotig	CDS	97935126	97935258	.	+	1	Parent=FBgn0013576.1.mrna2;Target=FBgn0013576.1 3642 3774 +
Chr2	gffcl	locus	97937799	97938185	.	-	.	ID=RLOC_00019800;geneIDs=comp146892_c0_seq1.path1;transcripts=comp146892_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97937799	97938185	.	-	.	ID=comp146892_c0_seq1.mrna1;geneID=comp146892_c0_seq1.path1;Name=comp146892_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=387;mismatches=0;indels=0;unknowns=0;Target=comp146892_c0_seq1 387 1 .;CDS_Target=comp146892_c0_seq1 239 117 .;locus=RLOC_00019800
Chr2	stalkie_big_nohaplotig	exon	97937799	97938185	100	-	.	Parent=comp146892_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97937947	97938069	.	-	0	Parent=comp146892_c0_seq1.mrna1
Chr2	gffcl	locus	97938397	97938680	.	+	.	ID=RLOC_00019801;geneIDs=comp1148752_c0_seq1.path1;transcripts=comp1148752_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97938397	97938680	.	+	.	ID=comp1148752_c0_seq1.mrna1;geneID=comp1148752_c0_seq1.path1;Name=comp1148752_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=284;mismatches=0;indels=0;unknowns=0;Target=comp1148752_c0_seq1 284 1 .;CDS_Target=comp1148752_c0_seq1 110 3 .;locus=RLOC_00019801
Chr2	stalkie_big_nohaplotig	exon	97938397	97938680	100	+	.	Parent=comp1148752_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97938399	97938506	.	+	0	Parent=comp1148752_c0_seq1.mrna1
Chr2	gffcl	locus	97942185	97942641	.	-	.	ID=RLOC_00019802;geneIDs=comp152324_c0_seq1.path1;transcripts=comp152324_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97942185	97942641	.	-	.	ID=comp152324_c0_seq1.mrna1;geneID=comp152324_c0_seq1.path1;Name=comp152324_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=450;mismatches=7;indels=1;unknowns=0;Target=comp152324_c0_seq1 458 1 .;CDS_Target=comp152324_c0_seq1 124 2 .;locus=RLOC_00019802
Chr2	stalkie_big_nohaplotig	exon	97942185	97942641	98	-	.	Parent=comp152324_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97942518	97942640	.	-	0	Parent=comp152324_c0_seq1.mrna1
Chr2	gffcl	locus	97945570	97946170	.	+	.	ID=RLOC_00019803;geneIDs=comp140405_c0_seq1.path1;transcripts=comp140405_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97945570	97946170	.	+	.	ID=comp140405_c0_seq1.mrna1;geneID=comp140405_c0_seq1.path1;Name=comp140405_c0_seq1;Dir=indeterminatecoverage=98.5;identity=100.0;matches=601;mismatches=0;indels=0;unknowns=0;Target=comp140405_c0_seq1 610 10 .;CDS_Target=comp140405_c0_seq1 154 11 .;locus=RLOC_00019803
Chr2	stalkie_big_nohaplotig	exon	97945570	97946170	100	+	.	Parent=comp140405_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97945571	97945714	.	+	0	Parent=comp140405_c0_seq1.mrna1
Chr2	gffcl	locus	97948161	97948613	.	-	.	ID=RLOC_00019804;geneIDs=comp118613_c0_seq1.path1;transcripts=comp118613_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97948161	97948613	.	-	.	ID=comp118613_c0_seq1.mrna1;geneID=comp118613_c0_seq1.path1;Name=comp118613_c0_seq1;Dir=indeterminatecoverage=95.6;identity=99.6;matches=451;mismatches=1;indels=1;unknowns=0;Target=comp118613_c0_seq1 473 22 .;CDS_Target=comp118613_c0_seq1 146 78 .;locus=RLOC_00019804
Chr2	stalkie_big_nohaplotig	exon	97948161	97948613	99	-	.	Parent=comp118613_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97948488	97948556	.	-	0	Parent=comp118613_c0_seq1.mrna1
Chr2	gffcl	locus	97948833	97949564	.	-	.	ID=RLOC_00019805;geneIDs=comp149828_c2_seq1.path1;transcripts=comp149828_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97948833	97949564	.	-	.	ID=comp149828_c2_seq1.mrna1;geneID=comp149828_c2_seq1.path1;Name=comp149828_c2_seq1;Dir=indeterminatecoverage=99.9;identity=98.6;matches=722;mismatches=10;indels=0;unknowns=0;Target=comp149828_c2_seq1 732 1 .;CDS_Target=comp149828_c2_seq1 619 506 .;locus=RLOC_00019805
Chr2	stalkie_big_nohaplotig	exon	97948833	97949564	98	-	.	Parent=comp149828_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97948946	97949059	.	-	0	Parent=comp149828_c2_seq1.mrna1
Chr2	gffcl	locus	97951950	97952472	.	+	.	ID=RLOC_00019806;geneIDs=comp116247_c0_seq1.path1;transcripts=comp116247_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97951950	97952472	.	+	.	ID=comp116247_c0_seq1.mrna1;geneID=comp116247_c0_seq1.path1;Name=comp116247_c0_seq1;Dir=indeterminatecoverage=96.0;identity=99.4;matches=520;mismatches=2;indels=1;unknowns=0;Target=comp116247_c0_seq1 544 23 .;CDS_Target=comp116247_c0_seq1 83 24 .;locus=RLOC_00019806
Chr2	stalkie_big_nohaplotig	exon	97951950	97952472	99	+	.	Parent=comp116247_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97951951	97952010	.	+	0	Parent=comp116247_c0_seq1.mrna1
Chr2	gffcl	locus	97956084	97957085	.	+	.	ID=RLOC_00019807;geneIDs=comp149588_c1_seq1.path1;transcripts=comp149588_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97956084	97957085	.	+	.	ID=comp149588_c1_seq1.mrna1;geneID=comp149588_c1_seq1.path1;Name=comp149588_c1_seq1;Dir=indeterminatecoverage=99.0;identity=100.0;matches=1002;mismatches=0;indels=0;unknowns=0;Target=comp149588_c1_seq1 1012 11 .;CDS_Target=comp149588_c1_seq1 937 857 .;locus=RLOC_00019807
Chr2	stalkie_big_nohaplotig	exon	97956084	97957085	100	+	.	Parent=comp149588_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97956930	97957010	.	+	0	Parent=comp149588_c1_seq1.mrna1
Chr2	gffcl	locus	97958299	97960045	.	-	.	ID=RLOC_00019808;geneIDs=comp163580_c1_seq1.path1;transcripts=comp163580_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97958299	97960045	.	-	.	ID=comp163580_c1_seq1.mrna1;geneID=comp163580_c1_seq1.path1;Name=comp163580_c1_seq1;Dir=sensecoverage=99.0;identity=93.3;matches=1604;mismatches=51;indels=64;unknowns=0;locus=RLOC_00019808
Chr2	stalkie_big_nohaplotig	exon	97958299	97958321	100	-	.	Parent=comp163580_c1_seq1.mrna1;Target=comp163580_c1_seq1 1714 1736 +
Chr2	stalkie_big_nohaplotig	exon	97958395	97958767	100	-	.	Parent=comp163580_c1_seq1.mrna1;Target=comp163580_c1_seq1 1341 1713 +
Chr2	stalkie_big_nohaplotig	exon	97958786	97960045	91	-	.	Parent=comp163580_c1_seq1.mrna1;Target=comp163580_c1_seq1 18 1339 +
Chr2	stalkie_big_nohaplotig	CDS	97958754	97958767	.	-	0	Parent=comp163580_c1_seq1.mrna1;Target=comp163580_c1_seq1 1341 1354 +
Chr2	stalkie_big_nohaplotig	CDS	97958786	97958992	.	-	0	Parent=comp163580_c1_seq1.mrna1;Target=comp163580_c1_seq1 1133 1339 +
Chr2	gffcl	locus	97985451	97986400	.	+	.	ID=RLOC_00019809;geneIDs=FBgn0037305.1.path1;transcripts=FBgn0037305.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97985451	97986400	.	+	.	ID=FBgn0037305.1.mrna1;geneID=FBgn0037305.1.path1;Name=FBgn0037305.1;Dir=sensecoverage=100.0;identity=100.0;matches=750;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019809
Chr2	stalkie_big_nohaplotig	exon	97985451	97985534	100	+	.	Parent=FBgn0037305.1.mrna1;Target=FBgn0037305.1 1 84 +
Chr2	stalkie_big_nohaplotig	exon	97985609	97985886	100	+	.	Parent=FBgn0037305.1.mrna1;Target=FBgn0037305.1 85 362 +
Chr2	stalkie_big_nohaplotig	exon	97985951	97986207	100	+	.	Parent=FBgn0037305.1.mrna1;Target=FBgn0037305.1 363 619 +
Chr2	stalkie_big_nohaplotig	exon	97986270	97986400	100	+	.	Parent=FBgn0037305.1.mrna1;Target=FBgn0037305.1 620 750 +
Chr2	stalkie_big_nohaplotig	CDS	97985451	97985534	.	+	0	Parent=FBgn0037305.1.mrna1;Target=FBgn0037305.1 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	97985609	97985886	.	+	0	Parent=FBgn0037305.1.mrna1;Target=FBgn0037305.1 85 362 +
Chr2	stalkie_big_nohaplotig	CDS	97985951	97986207	.	+	1	Parent=FBgn0037305.1.mrna1;Target=FBgn0037305.1 363 619 +
Chr2	stalkie_big_nohaplotig	CDS	97986270	97986400	.	+	2	Parent=FBgn0037305.1.mrna1;Target=FBgn0037305.1 620 750 +
Chr2	gffcl	locus	97986707	97991053	.	-	.	ID=RLOC_00019810;geneIDs=FBgn0037304.1.path1;transcripts=FBgn0037304.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97986707	97991053	.	-	.	ID=FBgn0037304.1.mrna1;geneID=FBgn0037304.1.path1;Name=FBgn0037304.1;Dir=sensecoverage=79.3;identity=100.0;matches=1654;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019810
Chr2	stalkie_big_nohaplotig	exon	97986707	97987148	100	-	.	Parent=FBgn0037304.1.mrna1;Target=FBgn0037304.1 1644 2085 +
Chr2	stalkie_big_nohaplotig	exon	97988991	97989169	100	-	.	Parent=FBgn0037304.1.mrna1;Target=FBgn0037304.1 1465 1643 +
Chr2	stalkie_big_nohaplotig	exon	97989230	97989449	100	-	.	Parent=FBgn0037304.1.mrna1;Target=FBgn0037304.1 1245 1464 +
Chr2	stalkie_big_nohaplotig	exon	97990175	97990537	100	-	.	Parent=FBgn0037304.1.mrna1;Target=FBgn0037304.1 882 1244 +
Chr2	stalkie_big_nohaplotig	exon	97990604	97991053	100	-	.	Parent=FBgn0037304.1.mrna1;Target=FBgn0037304.1 432 881 +
Chr2	stalkie_big_nohaplotig	CDS	97986707	97987148	.	-	1	Parent=FBgn0037304.1.mrna1;Target=FBgn0037304.1 1644 2085 +
Chr2	stalkie_big_nohaplotig	CDS	97988991	97989169	.	-	0	Parent=FBgn0037304.1.mrna1;Target=FBgn0037304.1 1465 1643 +
Chr2	stalkie_big_nohaplotig	CDS	97989230	97989449	.	-	1	Parent=FBgn0037304.1.mrna1;Target=FBgn0037304.1 1245 1464 +
Chr2	stalkie_big_nohaplotig	CDS	97990175	97990537	.	-	1	Parent=FBgn0037304.1.mrna1;Target=FBgn0037304.1 882 1244 +
Chr2	stalkie_big_nohaplotig	CDS	97990604	97991052	.	-	0	Parent=FBgn0037304.1.mrna1;Target=FBgn0037304.1 433 881 +
Chr2	gffcl	locus	97997211	98255951	.	+	.	ID=RLOC_00019811;geneIDs=comp151979_c0_seq1.path1;transcripts=comp151979_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97997211	98255951	.	+	.	ID=comp151979_c0_seq1.mrna1;geneID=comp151979_c0_seq1.path1;Name=comp151979_c0_seq1;Dir=indeterminatecoverage=100.0;identity=83.5;matches=558;mismatches=45;indels=65;unknowns=0;Target=comp151979_c0_seq1 120 1 .;locus=RLOC_00019811
Chr2	stalkie_big_nohaplotig	exon	97997211	97997520	98	+	.	Parent=comp151979_c0_seq1.mrna1;Target=comp151979_c0_seq1 310 1 .
Chr2	stalkie_big_nohaplotig	exon	98012575	98012578	100	+	.	Parent=comp151979_c0_seq1.mrna1;Target=comp151979_c0_seq1 314 311 .
Chr2	stalkie_big_nohaplotig	exon	98023342	98023347	100	+	.	Parent=comp151979_c0_seq1.mrna1;Target=comp151979_c0_seq1 320 315 .
Chr2	stalkie_big_nohaplotig	exon	98028179	98028180	100	+	.	Parent=comp151979_c0_seq1.mrna1;Target=comp151979_c0_seq1 322 321 .
Chr2	stalkie_big_nohaplotig	exon	98029736	98029745	100	+	.	Parent=comp151979_c0_seq1.mrna1;Target=comp151979_c0_seq1 332 323 .
Chr2	stalkie_big_nohaplotig	exon	98029981	98029989	100	+	.	Parent=comp151979_c0_seq1.mrna1;Target=comp151979_c0_seq1 341 333 .
Chr2	stalkie_big_nohaplotig	exon	98032640	98032645	100	+	.	Parent=comp151979_c0_seq1.mrna1;Target=comp151979_c0_seq1 347 342 .
Chr2	stalkie_big_nohaplotig	exon	98047521	98047550	62	+	.	Parent=comp151979_c0_seq1.mrna1;Target=comp151979_c0_seq1 384 348 .
Chr2	stalkie_big_nohaplotig	exon	98049287	98049290	100	+	.	Parent=comp151979_c0_seq1.mrna1;Target=comp151979_c0_seq1 388 385 .
Chr2	stalkie_big_nohaplotig	exon	98051045	98051072	35	+	.	Parent=comp151979_c0_seq1.mrna1;Target=comp151979_c0_seq1 461 389 .
Chr2	stalkie_big_nohaplotig	exon	98180352	98180362	90	+	.	Parent=comp151979_c0_seq1.mrna1;Target=comp151979_c0_seq1 472 462 .
Chr2	stalkie_big_nohaplotig	exon	98212605	98212607	100	+	.	Parent=comp151979_c0_seq1.mrna1;Target=comp151979_c0_seq1 475 473 .
Chr2	stalkie_big_nohaplotig	exon	98217138	98217141	100	+	.	Parent=comp151979_c0_seq1.mrna1;Target=comp151979_c0_seq1 479 476 .
Chr2	stalkie_big_nohaplotig	exon	98217846	98217850	100	+	.	Parent=comp151979_c0_seq1.mrna1;Target=comp151979_c0_seq1 484 480 .
Chr2	stalkie_big_nohaplotig	exon	98226044	98226047	100	+	.	Parent=comp151979_c0_seq1.mrna1;Target=comp151979_c0_seq1 488 485 .
Chr2	stalkie_big_nohaplotig	exon	98236737	98236761	60	+	.	Parent=comp151979_c0_seq1.mrna1;Target=comp151979_c0_seq1 518 489 .
Chr2	stalkie_big_nohaplotig	exon	98238936	98238944	100	+	.	Parent=comp151979_c0_seq1.mrna1;Target=comp151979_c0_seq1 527 519 .
Chr2	stalkie_big_nohaplotig	exon	98243306	98243372	63	+	.	Parent=comp151979_c0_seq1.mrna1;Target=comp151979_c0_seq1 595 533 .
Chr2	stalkie_big_nohaplotig	exon	98255880	98255951	91	+	.	Parent=comp151979_c0_seq1.mrna1;Target=comp151979_c0_seq1 667 596 .
Chr2	stalkie_big_nohaplotig	CDS	97997211	97997330	.	+	0	Parent=comp151979_c0_seq1.mrna1
Chr2	gffcl	locus	97998355	97998681	.	+	.	ID=RLOC_00019812;geneIDs=comp141930_c0_seq1.path1;transcripts=comp141930_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	97998355	97998681	.	+	.	ID=comp141930_c0_seq1.mrna1;geneID=comp141930_c0_seq1.path1;Name=comp141930_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=327;mismatches=0;indels=0;unknowns=0;Target=comp141930_c0_seq1 327 1 .;CDS_Target=comp141930_c0_seq1 283 254 .;locus=RLOC_00019812
Chr2	stalkie_big_nohaplotig	exon	97998355	97998681	100	+	.	Parent=comp141930_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	97998608	97998637	.	+	0	Parent=comp141930_c0_seq1.mrna1
Chr2	gffcl	locus	98000021	98000588	.	-	.	ID=RLOC_00019813;geneIDs=comp152229_c0_seq1.path1;transcripts=comp152229_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98000021	98000588	.	-	.	ID=comp152229_c0_seq1.mrna1;geneID=comp152229_c0_seq1.path1;Name=comp152229_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=565;mismatches=3;indels=0;unknowns=0;Target=comp152229_c0_seq1 568 1 .;CDS_Target=comp152229_c0_seq1 72 1 .;locus=RLOC_00019813
Chr2	stalkie_big_nohaplotig	exon	98000021	98000588	99	-	.	Parent=comp152229_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98000517	98000588	.	-	0	Parent=comp152229_c0_seq1.mrna1
Chr2	gffcl	locus	98227011	98229550	.	+	.	ID=RLOC_00019814;geneIDs=ORF197.path1;transcripts=ORF197.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98227011	98229550	.	+	.	ID=ORF197.mrna1;geneID=ORF197.path1;Name=ORF197;Dir=sensecoverage=97.6;identity=99.8;matches=2477;mismatches=5;indels=0;unknowns=0;locus=RLOC_00019814
Chr2	stalkie_big_nohaplotig	exon	98227011	98227380	99	+	.	Parent=ORF197.mrna1;Target=ORF197 63 432 +
Chr2	stalkie_big_nohaplotig	exon	98227439	98229550	99	+	.	Parent=ORF197.mrna1;Target=ORF197 433 2544 +
Chr2	stalkie_big_nohaplotig	CDS	98227012	98227380	.	+	0	Parent=ORF197.mrna1;Target=ORF197 64 432 +
Chr2	stalkie_big_nohaplotig	CDS	98227439	98229550	.	+	0	Parent=ORF197.mrna1;Target=ORF197 433 2544 +
Chr2	gffcl	locus	98233878	98234662	.	-	.	ID=RLOC_00019815;geneIDs=FBgn0037312.1.path1;transcripts=FBgn0037312.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98233878	98234662	.	-	.	ID=FBgn0037312.1.mrna1;geneID=FBgn0037312.1.path1;Name=FBgn0037312.1;Dir=sensecoverage=100.0;identity=100.0;matches=672;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019815
Chr2	stalkie_big_nohaplotig	exon	98233878	98234455	100	-	.	Parent=FBgn0037312.1.mrna1;Target=FBgn0037312.1 95 672 +
Chr2	stalkie_big_nohaplotig	exon	98234569	98234662	100	-	.	Parent=FBgn0037312.1.mrna1;Target=FBgn0037312.1 1 94 +
Chr2	stalkie_big_nohaplotig	CDS	98233878	98234455	.	-	2	Parent=FBgn0037312.1.mrna1;Target=FBgn0037312.1 95 672 +
Chr2	stalkie_big_nohaplotig	CDS	98234569	98234662	.	-	0	Parent=FBgn0037312.1.mrna1;Target=FBgn0037312.1 1 94 +
Chr2	gffcl	locus	98235718	98239606	.	+	.	ID=RLOC_00019816;geneIDs=FBgn0037313.1.path1;transcripts=FBgn0037313.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98235718	98239606	.	+	.	ID=FBgn0037313.1.mrna1;geneID=FBgn0037313.1.path1;Name=FBgn0037313.1;Dir=sensecoverage=100.0;identity=100.0;matches=759;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019816
Chr2	stalkie_big_nohaplotig	exon	98235718	98235903	100	+	.	Parent=FBgn0037313.1.mrna1;Target=FBgn0037313.1 1 186 +
Chr2	stalkie_big_nohaplotig	exon	98235960	98236135	100	+	.	Parent=FBgn0037313.1.mrna1;Target=FBgn0037313.1 187 362 +
Chr2	stalkie_big_nohaplotig	exon	98236231	98236339	100	+	.	Parent=FBgn0037313.1.mrna1;Target=FBgn0037313.1 363 471 +
Chr2	stalkie_big_nohaplotig	exon	98238972	98239097	100	+	.	Parent=FBgn0037313.1.mrna1;Target=FBgn0037313.1 472 597 +
Chr2	stalkie_big_nohaplotig	exon	98239445	98239606	100	+	.	Parent=FBgn0037313.1.mrna1;Target=FBgn0037313.1 598 759 +
Chr2	stalkie_big_nohaplotig	CDS	98235718	98235903	.	+	0	Parent=FBgn0037313.1.mrna1;Target=FBgn0037313.1 1 186 +
Chr2	stalkie_big_nohaplotig	CDS	98235960	98236135	.	+	0	Parent=FBgn0037313.1.mrna1;Target=FBgn0037313.1 187 362 +
Chr2	stalkie_big_nohaplotig	CDS	98236231	98236339	.	+	1	Parent=FBgn0037313.1.mrna1;Target=FBgn0037313.1 363 471 +
Chr2	stalkie_big_nohaplotig	CDS	98238972	98239097	.	+	0	Parent=FBgn0037313.1.mrna1;Target=FBgn0037313.1 472 597 +
Chr2	stalkie_big_nohaplotig	CDS	98239445	98239606	.	+	0	Parent=FBgn0037313.1.mrna1;Target=FBgn0037313.1 598 759 +
Chr2	gffcl	locus	98242007	98242987	.	-	.	ID=RLOC_00019817;geneIDs=FBgn0250746.1.path1;transcripts=FBgn0250746.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98242007	98242987	.	-	.	ID=FBgn0250746.1.mrna1;geneID=FBgn0250746.1.path1;Name=FBgn0250746.1;Dir=sensecoverage=100.0;identity=98.9;matches=846;mismatches=9;indels=0;unknowns=0;locus=RLOC_00019817
Chr2	stalkie_big_nohaplotig	exon	98242007	98242156	100	-	.	Parent=FBgn0250746.1.mrna1;Target=FBgn0250746.1 706 855 +
Chr2	stalkie_big_nohaplotig	exon	98242213	98242711	98	-	.	Parent=FBgn0250746.1.mrna1;Target=FBgn0250746.1 207 705 +
Chr2	stalkie_big_nohaplotig	exon	98242782	98242987	99	-	.	Parent=FBgn0250746.1.mrna1;Target=FBgn0250746.1 1 206 +
Chr2	stalkie_big_nohaplotig	CDS	98242007	98242156	.	-	0	Parent=FBgn0250746.1.mrna1;Target=FBgn0250746.1 706 855 +
Chr2	stalkie_big_nohaplotig	CDS	98242213	98242711	.	-	1	Parent=FBgn0250746.1.mrna1;Target=FBgn0250746.1 207 705 +
Chr2	stalkie_big_nohaplotig	CDS	98242782	98242987	.	-	0	Parent=FBgn0250746.1.mrna1;Target=FBgn0250746.1 1 206 +
Chr2	gffcl	locus	98247063	98252874	.	-	.	ID=RLOC_00019818;geneIDs=FBgn0037315.1.path1;transcripts=FBgn0037315.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98247063	98252874	.	-	.	ID=FBgn0037315.1.mrna1;geneID=FBgn0037315.1.path1;Name=FBgn0037315.1;Dir=sensecoverage=99.8;identity=98.8;matches=2275;mismatches=27;indels=0;unknowns=0;locus=RLOC_00019818
Chr2	stalkie_big_nohaplotig	exon	98247063	98247168	99	-	.	Parent=FBgn0037315.1.mrna1;Target=FBgn0037315.1 2202 2307 +
Chr2	stalkie_big_nohaplotig	exon	98248215	98248414	99	-	.	Parent=FBgn0037315.1.mrna1;Target=FBgn0037315.1 2002 2201 +
Chr2	stalkie_big_nohaplotig	exon	98248760	98250516	98	-	.	Parent=FBgn0037315.1.mrna1;Target=FBgn0037315.1 245 2001 +
Chr2	stalkie_big_nohaplotig	exon	98252636	98252874	98	-	.	Parent=FBgn0037315.1.mrna1;Target=FBgn0037315.1 6 244 +
Chr2	stalkie_big_nohaplotig	CDS	98247063	98247168	.	-	1	Parent=FBgn0037315.1.mrna1;Target=FBgn0037315.1 2202 2307 +
Chr2	stalkie_big_nohaplotig	CDS	98248215	98248414	.	-	0	Parent=FBgn0037315.1.mrna1;Target=FBgn0037315.1 2002 2201 +
Chr2	stalkie_big_nohaplotig	CDS	98248760	98250516	.	-	2	Parent=FBgn0037315.1.mrna1;Target=FBgn0037315.1 245 2001 +
Chr2	stalkie_big_nohaplotig	CDS	98252636	98252873	.	-	0	Parent=FBgn0037315.1.mrna1;Target=FBgn0037315.1 7 244 +
Chr2	gffcl	locus	98260921	98261398	.	-	.	ID=RLOC_00019819;geneIDs=comp117493_c1_seq1.path1;transcripts=comp117493_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98260921	98261398	.	-	.	ID=comp117493_c1_seq1.mrna1;geneID=comp117493_c1_seq1.path1;Name=comp117493_c1_seq1;Dir=indeterminatecoverage=97.8;identity=98.6;matches=477;mismatches=1;indels=6;unknowns=0;Target=comp117493_c1_seq1 484 1 .;CDS_Target=comp117493_c1_seq1 50 3 .;locus=RLOC_00019819
Chr2	stalkie_big_nohaplotig	exon	98260921	98261398	98	-	.	Parent=comp117493_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98261349	98261396	.	-	0	Parent=comp117493_c1_seq1.mrna1
Chr2	gffcl	locus	98262364	98263121	.	-	.	ID=RLOC_00019820;geneIDs=comp143177_c0_seq1.path1;transcripts=comp143177_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98262364	98263121	.	-	.	ID=comp143177_c0_seq1.mrna1;geneID=comp143177_c0_seq1.path1;Name=comp143177_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=758;mismatches=0;indels=0;unknowns=0;Target=comp143177_c0_seq1 758 1 .;CDS_Target=comp143177_c0_seq1 454 380 .;locus=RLOC_00019820
Chr2	stalkie_big_nohaplotig	exon	98262364	98263121	100	-	.	Parent=comp143177_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98262668	98262742	.	-	0	Parent=comp143177_c0_seq1.mrna1
Chr2	gffcl	locus	98263664	98271597	.	-	.	ID=RLOC_00019821;geneIDs=FBgn0037321.1.path1;transcripts=FBgn0037321.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98263664	98271597	.	-	.	ID=FBgn0037321.1.mrna1;geneID=FBgn0037321.1.path1;Name=FBgn0037321.1;Dir=sensecoverage=100.0;identity=99.6;matches=843;mismatches=3;indels=0;unknowns=0;locus=RLOC_00019821
Chr2	stalkie_big_nohaplotig	exon	98263664	98263834	100	-	.	Parent=FBgn0037321.1.mrna1;Target=FBgn0037321.1 676 846 +
Chr2	stalkie_big_nohaplotig	exon	98263911	98264151	99	-	.	Parent=FBgn0037321.1.mrna1;Target=FBgn0037321.1 435 675 +
Chr2	stalkie_big_nohaplotig	exon	98271029	98271278	99	-	.	Parent=FBgn0037321.1.mrna1;Target=FBgn0037321.1 185 434 +
Chr2	stalkie_big_nohaplotig	exon	98271340	98271439	100	-	.	Parent=FBgn0037321.1.mrna1;Target=FBgn0037321.1 85 184 +
Chr2	stalkie_big_nohaplotig	exon	98271514	98271597	100	-	.	Parent=FBgn0037321.1.mrna1;Target=FBgn0037321.1 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	98263664	98263834	.	-	0	Parent=FBgn0037321.1.mrna1;Target=FBgn0037321.1 676 846 +
Chr2	stalkie_big_nohaplotig	CDS	98263911	98264151	.	-	1	Parent=FBgn0037321.1.mrna1;Target=FBgn0037321.1 435 675 +
Chr2	stalkie_big_nohaplotig	CDS	98271029	98271278	.	-	2	Parent=FBgn0037321.1.mrna1;Target=FBgn0037321.1 185 434 +
Chr2	stalkie_big_nohaplotig	CDS	98271340	98271439	.	-	0	Parent=FBgn0037321.1.mrna1;Target=FBgn0037321.1 85 184 +
Chr2	stalkie_big_nohaplotig	CDS	98271514	98271597	.	-	0	Parent=FBgn0037321.1.mrna1;Target=FBgn0037321.1 1 84 +
Chr2	gffcl	locus	98274888	98276468	.	+	.	ID=RLOC_00019822;geneIDs=FBgn0034623.3.path1;transcripts=FBgn0034623.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98274888	98276468	.	+	.	ID=FBgn0034623.3.mrna1;geneID=FBgn0034623.3.path1;Name=FBgn0034623.3;Dir=sensecoverage=95.2;identity=98.8;matches=795;mismatches=4;indels=6;unknowns=0;locus=RLOC_00019822
Chr2	stalkie_big_nohaplotig	exon	98274888	98275032	95	+	.	Parent=FBgn0034623.3.mrna1;Target=FBgn0034623.3 42 192 +
Chr2	stalkie_big_nohaplotig	exon	98275688	98275837	99	+	.	Parent=FBgn0034623.3.mrna1;Target=FBgn0034623.3 193 342 +
Chr2	stalkie_big_nohaplotig	exon	98275909	98276144	99	+	.	Parent=FBgn0034623.3.mrna1;Target=FBgn0034623.3 343 578 +
Chr2	stalkie_big_nohaplotig	exon	98276201	98276468	100	+	.	Parent=FBgn0034623.3.mrna1;Target=FBgn0034623.3 579 846 +
Chr2	stalkie_big_nohaplotig	CDS	98274889	98275032	.	+	0	Parent=FBgn0034623.3.mrna1;Target=FBgn0034623.3 43 192 +
Chr2	stalkie_big_nohaplotig	CDS	98275688	98275837	.	+	0	Parent=FBgn0034623.3.mrna1;Target=FBgn0034623.3 193 342 +
Chr2	stalkie_big_nohaplotig	CDS	98275909	98276144	.	+	0	Parent=FBgn0034623.3.mrna1;Target=FBgn0034623.3 343 578 +
Chr2	stalkie_big_nohaplotig	CDS	98276201	98276468	.	+	1	Parent=FBgn0034623.3.mrna1;Target=FBgn0034623.3 579 846 +
Chr2	gffcl	locus	98312466	98328882	.	+	.	ID=RLOC_00019823;geneIDs=FBgn0001311.1.path1;transcripts=FBgn0001311.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98312466	98328882	.	+	.	ID=FBgn0001311.1.mrna1;geneID=FBgn0001311.1.path1;Name=FBgn0001311.1;Dir=sensecoverage=100.0;identity=100.0;matches=4785;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019823
Chr2	stalkie_big_nohaplotig	exon	98312466	98312584	100	+	.	Parent=FBgn0001311.1.mrna1;Target=FBgn0001311.1 1 119 +
Chr2	stalkie_big_nohaplotig	exon	98315916	98316159	100	+	.	Parent=FBgn0001311.1.mrna1;Target=FBgn0001311.1 120 363 +
Chr2	stalkie_big_nohaplotig	exon	98316230	98317459	100	+	.	Parent=FBgn0001311.1.mrna1;Target=FBgn0001311.1 364 1593 +
Chr2	stalkie_big_nohaplotig	exon	98317523	98317793	100	+	.	Parent=FBgn0001311.1.mrna1;Target=FBgn0001311.1 1594 1864 +
Chr2	stalkie_big_nohaplotig	exon	98317921	98319848	100	+	.	Parent=FBgn0001311.1.mrna1;Target=FBgn0001311.1 1865 3792 +
Chr2	stalkie_big_nohaplotig	exon	98320036	98320212	100	+	.	Parent=FBgn0001311.1.mrna1;Target=FBgn0001311.1 3793 3969 +
Chr2	stalkie_big_nohaplotig	exon	98325690	98325890	100	+	.	Parent=FBgn0001311.1.mrna1;Target=FBgn0001311.1 3970 4170 +
Chr2	stalkie_big_nohaplotig	exon	98326708	98326918	100	+	.	Parent=FBgn0001311.1.mrna1;Target=FBgn0001311.1 4171 4381 +
Chr2	stalkie_big_nohaplotig	exon	98328184	98328335	100	+	.	Parent=FBgn0001311.1.mrna1;Target=FBgn0001311.1 4382 4533 +
Chr2	stalkie_big_nohaplotig	exon	98328396	98328497	100	+	.	Parent=FBgn0001311.1.mrna1;Target=FBgn0001311.1 4534 4635 +
Chr2	stalkie_big_nohaplotig	exon	98328733	98328882	100	+	.	Parent=FBgn0001311.1.mrna1;Target=FBgn0001311.1 4636 4785 +
Chr2	stalkie_big_nohaplotig	CDS	98312466	98312584	.	+	0	Parent=FBgn0001311.1.mrna1;Target=FBgn0001311.1 1 119 +
Chr2	stalkie_big_nohaplotig	CDS	98315916	98316159	.	+	1	Parent=FBgn0001311.1.mrna1;Target=FBgn0001311.1 120 363 +
Chr2	stalkie_big_nohaplotig	CDS	98316230	98317459	.	+	0	Parent=FBgn0001311.1.mrna1;Target=FBgn0001311.1 364 1593 +
Chr2	stalkie_big_nohaplotig	CDS	98317523	98317793	.	+	0	Parent=FBgn0001311.1.mrna1;Target=FBgn0001311.1 1594 1864 +
Chr2	stalkie_big_nohaplotig	CDS	98317921	98319848	.	+	2	Parent=FBgn0001311.1.mrna1;Target=FBgn0001311.1 1865 3792 +
Chr2	stalkie_big_nohaplotig	CDS	98320036	98320212	.	+	0	Parent=FBgn0001311.1.mrna1;Target=FBgn0001311.1 3793 3969 +
Chr2	stalkie_big_nohaplotig	CDS	98325690	98325890	.	+	0	Parent=FBgn0001311.1.mrna1;Target=FBgn0001311.1 3970 4170 +
Chr2	stalkie_big_nohaplotig	CDS	98326708	98326918	.	+	0	Parent=FBgn0001311.1.mrna1;Target=FBgn0001311.1 4171 4381 +
Chr2	stalkie_big_nohaplotig	CDS	98328184	98328335	.	+	2	Parent=FBgn0001311.1.mrna1;Target=FBgn0001311.1 4382 4533 +
Chr2	stalkie_big_nohaplotig	CDS	98328396	98328497	.	+	0	Parent=FBgn0001311.1.mrna1;Target=FBgn0001311.1 4534 4635 +
Chr2	stalkie_big_nohaplotig	CDS	98328733	98328882	.	+	0	Parent=FBgn0001311.1.mrna1;Target=FBgn0001311.1 4636 4785 +
Chr2	gffcl	locus	98322033	98323167	.	-	.	ID=RLOC_00019824;geneIDs=comp152841_c1_seq1.path1;transcripts=comp152841_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98322033	98323167	.	-	.	ID=comp152841_c1_seq1.mrna1;geneID=comp152841_c1_seq1.path1;Name=comp152841_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1135;mismatches=0;indels=0;unknowns=0;Target=comp152841_c1_seq1 1135 1 .;CDS_Target=comp152841_c1_seq1 813 667 .;locus=RLOC_00019824
Chr2	stalkie_big_nohaplotig	exon	98322033	98323167	100	-	.	Parent=comp152841_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98322355	98322501	.	-	0	Parent=comp152841_c1_seq1.mrna1
Chr2	gffcl	locus	98323579	98324073	.	+	.	ID=RLOC_00019825;geneIDs=comp118717_c0_seq1.path1;transcripts=comp118717_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98323579	98324073	.	+	.	ID=comp118717_c0_seq1.mrna1;geneID=comp118717_c0_seq1.path1;Name=comp118717_c0_seq1;Dir=indeterminatecoverage=97.8;identity=100.0;matches=495;mismatches=0;indels=0;unknowns=0;Target=comp118717_c0_seq1 505 11 .;CDS_Target=comp118717_c0_seq1 85 11 .;locus=RLOC_00019825
Chr2	stalkie_big_nohaplotig	exon	98323579	98324073	100	+	.	Parent=comp118717_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98323579	98323653	.	+	0	Parent=comp118717_c0_seq1.mrna1
Chr2	gffcl	locus	98331915	98332844	.	-	.	ID=RLOC_00019826;geneIDs=FBgn0041707.1.path1;transcripts=FBgn0041707.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98331915	98332844	.	-	.	ID=FBgn0041707.1.mrna1;geneID=FBgn0041707.1.path1;Name=FBgn0041707.1;Dir=sensecoverage=100.0;identity=99.0;matches=826;mismatches=8;indels=0;unknowns=0;locus=RLOC_00019826
Chr2	stalkie_big_nohaplotig	exon	98331915	98332681	98	-	.	Parent=FBgn0041707.1.mrna1;Target=FBgn0041707.1 68 834 +
Chr2	stalkie_big_nohaplotig	exon	98332778	98332844	100	-	.	Parent=FBgn0041707.1.mrna1;Target=FBgn0041707.1 1 67 +
Chr2	stalkie_big_nohaplotig	CDS	98331915	98332681	.	-	2	Parent=FBgn0041707.1.mrna1;Target=FBgn0041707.1 68 834 +
Chr2	stalkie_big_nohaplotig	CDS	98332778	98332844	.	-	0	Parent=FBgn0041707.1.mrna1;Target=FBgn0041707.1 1 67 +
Chr2	gffcl	locus	98337289	98340378	.	+	.	ID=RLOC_00019827;geneIDs=FBgn0086695.1.path1;transcripts=FBgn0086695.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98337289	98340378	.	+	.	ID=FBgn0086695.1.mrna1;geneID=FBgn0086695.1.path1;Name=FBgn0086695.1;Dir=sensecoverage=100.0;identity=99.5;matches=1702;mismatches=8;indels=0;unknowns=0;locus=RLOC_00019827
Chr2	stalkie_big_nohaplotig	exon	98337289	98337342	100	+	.	Parent=FBgn0086695.1.mrna1;Target=FBgn0086695.1 1 54 +
Chr2	stalkie_big_nohaplotig	exon	98337402	98337550	100	+	.	Parent=FBgn0086695.1.mrna1;Target=FBgn0086695.1 55 203 +
Chr2	stalkie_big_nohaplotig	exon	98337618	98338447	99	+	.	Parent=FBgn0086695.1.mrna1;Target=FBgn0086695.1 204 1033 +
Chr2	stalkie_big_nohaplotig	exon	98339702	98340378	99	+	.	Parent=FBgn0086695.1.mrna1;Target=FBgn0086695.1 1034 1710 +
Chr2	stalkie_big_nohaplotig	CDS	98337289	98337342	.	+	0	Parent=FBgn0086695.1.mrna1;Target=FBgn0086695.1 1 54 +
Chr2	stalkie_big_nohaplotig	CDS	98337402	98337550	.	+	0	Parent=FBgn0086695.1.mrna1;Target=FBgn0086695.1 55 203 +
Chr2	stalkie_big_nohaplotig	CDS	98337618	98338447	.	+	1	Parent=FBgn0086695.1.mrna1;Target=FBgn0086695.1 204 1033 +
Chr2	stalkie_big_nohaplotig	CDS	98339702	98340378	.	+	2	Parent=FBgn0086695.1.mrna1;Target=FBgn0086695.1 1034 1710 +
Chr2	gffcl	locus	98340854	98341378	.	-	.	ID=RLOC_00019828;geneIDs=FBgn0003275.1.path1;transcripts=FBgn0003275.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98340854	98341378	.	-	.	ID=FBgn0003275.1.mrna1;geneID=FBgn0003275.1.path1;Name=FBgn0003275.1;Dir=sensecoverage=99.8;identity=99.8;matches=442;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019828
Chr2	stalkie_big_nohaplotig	exon	98340854	98341217	99	-	.	Parent=FBgn0003275.1.mrna1;Target=FBgn0003275.1 81 444 +
Chr2	stalkie_big_nohaplotig	exon	98341300	98341378	100	-	.	Parent=FBgn0003275.1.mrna1;Target=FBgn0003275.1 2 80 +
Chr2	stalkie_big_nohaplotig	CDS	98340854	98341217	.	-	1	Parent=FBgn0003275.1.mrna1;Target=FBgn0003275.1 81 444 +
Chr2	stalkie_big_nohaplotig	CDS	98341300	98341376	.	-	0	Parent=FBgn0003275.1.mrna1;Target=FBgn0003275.1 4 80 +
Chr2	gffcl	locus	98345243	98346328	.	-	.	ID=RLOC_00019829;geneIDs=ORF1488.path1;transcripts=ORF1488.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98345243	98346328	.	-	.	ID=ORF1488.mrna1;geneID=ORF1488.path1;Name=ORF1488;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1084;mismatches=2;indels=0;unknowns=0;Target=ORF1488 1086 1 .;locus=RLOC_00019829
Chr2	stalkie_big_nohaplotig	exon	98345243	98346328	99	-	.	Parent=ORF1488.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98345243	98346328	.	-	0	Parent=ORF1488.mrna1
Chr2	gffcl	locus	98378134	98379132	.	-	.	ID=RLOC_00019830;geneIDs=FBgn0037323.1.path1;transcripts=FBgn0037323.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98378134	98379132	.	-	.	ID=FBgn0037323.1.mrna1;geneID=FBgn0037323.1.path1;Name=FBgn0037323.1;Dir=sensecoverage=97.8;identity=100.0;matches=924;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019830
Chr2	stalkie_big_nohaplotig	exon	98378134	98378752	100	-	.	Parent=FBgn0037323.1.mrna1;Target=FBgn0037323.1 327 945 +
Chr2	stalkie_big_nohaplotig	exon	98378828	98379132	100	-	.	Parent=FBgn0037323.1.mrna1;Target=FBgn0037323.1 22 326 +
Chr2	stalkie_big_nohaplotig	CDS	98378134	98378752	.	-	1	Parent=FBgn0037323.1.mrna1;Target=FBgn0037323.1 327 945 +
Chr2	stalkie_big_nohaplotig	CDS	98378828	98379132	.	-	0	Parent=FBgn0037323.1.mrna1;Target=FBgn0037323.1 22 326 +
Chr2	gffcl	locus	98415512	98423895	.	-	.	ID=RLOC_00019831;geneIDs=FBgn0037324.1.path1;transcripts=FBgn0037324.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98415512	98423895	.	-	.	ID=FBgn0037324.1.mrna1;geneID=FBgn0037324.1.path1;Name=FBgn0037324.1;Dir=sensecoverage=100.0;identity=99.9;matches=1457;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019831
Chr2	stalkie_big_nohaplotig	exon	98415512	98415559	100	-	.	Parent=FBgn0037324.1.mrna1;Target=FBgn0037324.1 1411 1458 +
Chr2	stalkie_big_nohaplotig	exon	98415808	98415963	100	-	.	Parent=FBgn0037324.1.mrna1;Target=FBgn0037324.1 1255 1410 +
Chr2	stalkie_big_nohaplotig	exon	98416354	98416558	100	-	.	Parent=FBgn0037324.1.mrna1;Target=FBgn0037324.1 1050 1254 +
Chr2	stalkie_big_nohaplotig	exon	98418238	98418442	100	-	.	Parent=FBgn0037324.1.mrna1;Target=FBgn0037324.1 845 1049 +
Chr2	stalkie_big_nohaplotig	exon	98418580	98418957	100	-	.	Parent=FBgn0037324.1.mrna1;Target=FBgn0037324.1 467 844 +
Chr2	stalkie_big_nohaplotig	exon	98419309	98419445	100	-	.	Parent=FBgn0037324.1.mrna1;Target=FBgn0037324.1 330 466 +
Chr2	stalkie_big_nohaplotig	exon	98419693	98420003	99	-	.	Parent=FBgn0037324.1.mrna1;Target=FBgn0037324.1 19 329 +
Chr2	stalkie_big_nohaplotig	exon	98423878	98423895	100	-	.	Parent=FBgn0037324.1.mrna1;Target=FBgn0037324.1 1 18 +
Chr2	stalkie_big_nohaplotig	CDS	98415512	98415559	.	-	0	Parent=FBgn0037324.1.mrna1;Target=FBgn0037324.1 1411 1458 +
Chr2	stalkie_big_nohaplotig	CDS	98415808	98415963	.	-	0	Parent=FBgn0037324.1.mrna1;Target=FBgn0037324.1 1255 1410 +
Chr2	stalkie_big_nohaplotig	CDS	98416354	98416558	.	-	1	Parent=FBgn0037324.1.mrna1;Target=FBgn0037324.1 1050 1254 +
Chr2	stalkie_big_nohaplotig	CDS	98418238	98418442	.	-	2	Parent=FBgn0037324.1.mrna1;Target=FBgn0037324.1 845 1049 +
Chr2	stalkie_big_nohaplotig	CDS	98418580	98418957	.	-	2	Parent=FBgn0037324.1.mrna1;Target=FBgn0037324.1 467 844 +
Chr2	stalkie_big_nohaplotig	CDS	98419309	98419445	.	-	1	Parent=FBgn0037324.1.mrna1;Target=FBgn0037324.1 330 466 +
Chr2	stalkie_big_nohaplotig	CDS	98419693	98420003	.	-	0	Parent=FBgn0037324.1.mrna1;Target=FBgn0037324.1 19 329 +
Chr2	stalkie_big_nohaplotig	CDS	98423878	98423895	.	-	0	Parent=FBgn0037324.1.mrna1;Target=FBgn0037324.1 1 18 +
Chr2	gffcl	locus	98441525	98443708	.	-	.	ID=RLOC_00019832;geneIDs=ORF275.path1;transcripts=ORF275.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98441525	98443708	.	-	.	ID=ORF275.mrna1;geneID=ORF275.path1;Name=ORF275;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2182;mismatches=2;indels=0;unknowns=0;Target=ORF275 2184 1 .;locus=RLOC_00019832
Chr2	stalkie_big_nohaplotig	exon	98441525	98443708	99	-	.	Parent=ORF275.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98441525	98443708	.	-	0	Parent=ORF275.mrna1
Chr2	gffcl	locus	98444729	98445709	.	-	.	ID=RLOC_00019833;geneIDs=ORF1850.path1;transcripts=ORF1850.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98444729	98445709	.	-	.	ID=ORF1850.mrna1;geneID=ORF1850.path1;Name=ORF1850;Dir=indeterminatecoverage=100.0;identity=99.3;matches=974;mismatches=7;indels=0;unknowns=0;Target=ORF1850 981 1 .;locus=RLOC_00019833
Chr2	stalkie_big_nohaplotig	exon	98444729	98445709	99	-	.	Parent=ORF1850.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98444729	98445709	.	-	0	Parent=ORF1850.mrna1
Chr2	gffcl	locus	98474550	98474712	.	-	.	ID=RLOC_00019834;geneIDs=comp149866_c0_seq1.path3;transcripts=comp149866_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	98474550	98474712	.	-	.	ID=comp149866_c0_seq1.mrna3;geneID=comp149866_c0_seq1.path3;Name=comp149866_c0_seq1;Dir=indeterminatecoverage=44.1;identity=79.6;matches=109;mismatches=17;indels=11;unknowns=0;Target=comp149866_c0_seq1 218 174 .;locus=RLOC_00019834
Chr2	stalkie_big_nohaplotig	exon	98474550	98474576	92	-	.	Parent=comp149866_c0_seq1.mrna3;Target=comp149866_c0_seq1 335 309 .
Chr2	stalkie_big_nohaplotig	exon	98474603	98474712	76	-	.	Parent=comp149866_c0_seq1.mrna3;Target=comp149866_c0_seq1 271 173 .
Chr2	stalkie_big_nohaplotig	CDS	98474667	98474711	.	-	0	Parent=comp149866_c0_seq1.mrna3
Chr2	gffcl	locus	98499362	98500317	.	+	.	ID=RLOC_00019835;geneIDs=comp143040_c0_seq1.path1;transcripts=comp143040_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98499362	98500317	.	+	.	ID=comp143040_c0_seq1.mrna1;geneID=comp143040_c0_seq1.path1;Name=comp143040_c0_seq1;Dir=indeterminatecoverage=98.0;identity=99.5;matches=951;mismatches=5;indels=0;unknowns=0;Target=comp143040_c0_seq1 956 1 .;CDS_Target=comp143040_c0_seq1 484 389 .;locus=RLOC_00019835
Chr2	stalkie_big_nohaplotig	exon	98499362	98500317	99	+	.	Parent=comp143040_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98499750	98499845	.	+	0	Parent=comp143040_c0_seq1.mrna1
Chr2	gffcl	locus	98512756	98513666	.	-	.	ID=RLOC_00019836;geneIDs=FBgn0032368.1.path1;transcripts=FBgn0032368.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98512756	98513666	.	-	.	ID=FBgn0032368.1.mrna1;geneID=FBgn0032368.1.path1;Name=FBgn0032368.1;Dir=sensecoverage=100.0;identity=99.8;matches=853;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019836
Chr2	stalkie_big_nohaplotig	exon	98512756	98513587	99	-	.	Parent=FBgn0032368.1.mrna1;Target=FBgn0032368.1 24 855 +
Chr2	stalkie_big_nohaplotig	exon	98513644	98513666	100	-	.	Parent=FBgn0032368.1.mrna1;Target=FBgn0032368.1 1 23 +
Chr2	stalkie_big_nohaplotig	CDS	98512756	98513587	.	-	1	Parent=FBgn0032368.1.mrna1;Target=FBgn0032368.1 24 855 +
Chr2	stalkie_big_nohaplotig	CDS	98513644	98513666	.	-	0	Parent=FBgn0032368.1.mrna1;Target=FBgn0032368.1 1 23 +
Chr2	gffcl	locus	98514603	98515041	.	+	.	ID=RLOC_00019837;geneIDs=comp143788_c0_seq1.path1;transcripts=comp143788_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98514603	98515041	.	+	.	ID=comp143788_c0_seq1.mrna1;geneID=comp143788_c0_seq1.path1;Name=comp143788_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.5;matches=437;mismatches=2;indels=0;unknowns=0;Target=comp143788_c0_seq1 439 1 .;CDS_Target=comp143788_c0_seq1 177 1 .;locus=RLOC_00019837
Chr2	stalkie_big_nohaplotig	exon	98514603	98515041	99	+	.	Parent=comp143788_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98514603	98514779	.	+	0	Parent=comp143788_c0_seq1.mrna1
Chr2	gffcl	locus	98558988	98559481	.	+	.	ID=RLOC_00019838;geneIDs=comp142413_c0_seq1.path1;transcripts=comp142413_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98558988	98559481	.	+	.	ID=comp142413_c0_seq1.mrna1;geneID=comp142413_c0_seq1.path1;Name=comp142413_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=494;mismatches=0;indels=0;unknowns=0;Target=comp142413_c0_seq1 494 1 .;CDS_Target=comp142413_c0_seq1 373 299 .;locus=RLOC_00019838
Chr2	stalkie_big_nohaplotig	exon	98558988	98559481	100	+	.	Parent=comp142413_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98559286	98559360	.	+	0	Parent=comp142413_c0_seq1.mrna1
Chr2	gffcl	locus	98560176	98561155	.	+	.	ID=RLOC_00019839;geneIDs=comp156972_c0_seq1.path1;transcripts=comp156972_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98560176	98561155	.	+	.	ID=comp156972_c0_seq1.mrna1;geneID=comp156972_c0_seq1.path1;Name=comp156972_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=763;mismatches=0;indels=1;unknowns=0;Target=comp156972_c0_seq1 776 573 .;locus=RLOC_00019839
Chr2	stalkie_big_nohaplotig	exon	98560176	98560718	99	+	.	Parent=comp156972_c0_seq1.mrna1;Target=comp156972_c0_seq1 544 1 .
Chr2	stalkie_big_nohaplotig	exon	98560936	98561155	100	+	.	Parent=comp156972_c0_seq1.mrna1;Target=comp156972_c0_seq1 777 558 .
Chr2	stalkie_big_nohaplotig	CDS	98560951	98561154	.	+	0	Parent=comp156972_c0_seq1.mrna1
Chr2	gffcl	locus	98561292	98561531	.	-	.	ID=RLOC_00019840;geneIDs=comp147977_c1_seq1.path1;transcripts=comp147977_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98561292	98561531	.	-	.	ID=comp147977_c1_seq1.mrna1;geneID=comp147977_c1_seq1.path1;Name=comp147977_c1_seq1;Dir=indeterminatecoverage=50.0;identity=100.0;matches=240;mismatches=0;indels=0;unknowns=0;Target=comp147977_c1_seq1 468 229 .;CDS_Target=comp147977_c1_seq1 310 257 .;locus=RLOC_00019840
Chr2	stalkie_big_nohaplotig	exon	98561292	98561531	100	-	.	Parent=comp147977_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98561450	98561503	.	-	0	Parent=comp147977_c1_seq1.mrna1
Chr2	gffcl	locus	98565306	98567312	.	+	.	ID=RLOC_00019841;geneIDs=FBgn0032613.1.path1;transcripts=FBgn0032613.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98565306	98567312	.	+	.	ID=FBgn0032613.1.mrna1;geneID=FBgn0032613.1.path1;Name=FBgn0032613.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2006;mismatches=1;indels=0;unknowns=0;Target=FBgn0032613.1 2007 1 .;locus=RLOC_00019841
Chr2	stalkie_big_nohaplotig	exon	98565306	98567312	99	+	.	Parent=FBgn0032613.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98565306	98567312	.	+	0	Parent=FBgn0032613.1.mrna1
Chr2	gffcl	locus	98572335	98587118	.	-	.	ID=RLOC_00019842;geneIDs=FBgn0037327.1.path1;transcripts=FBgn0037327.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98572335	98587118	.	-	.	ID=FBgn0037327.1.mrna1;geneID=FBgn0037327.1.path1;Name=FBgn0037327.1;Dir=sensecoverage=100.0;identity=99.6;matches=3430;mismatches=14;indels=0;unknowns=0;locus=RLOC_00019842
Chr2	stalkie_big_nohaplotig	exon	98572335	98573714	99	-	.	Parent=FBgn0037327.1.mrna1;Target=FBgn0037327.1 2065 3444 +
Chr2	stalkie_big_nohaplotig	exon	98573791	98574729	99	-	.	Parent=FBgn0037327.1.mrna1;Target=FBgn0037327.1 1126 2064 +
Chr2	stalkie_big_nohaplotig	exon	98574789	98574968	100	-	.	Parent=FBgn0037327.1.mrna1;Target=FBgn0037327.1 946 1125 +
Chr2	stalkie_big_nohaplotig	exon	98575542	98576247	98	-	.	Parent=FBgn0037327.1.mrna1;Target=FBgn0037327.1 240 945 +
Chr2	stalkie_big_nohaplotig	exon	98586880	98587118	100	-	.	Parent=FBgn0037327.1.mrna1;Target=FBgn0037327.1 1 239 +
Chr2	stalkie_big_nohaplotig	CDS	98572335	98573714	.	-	0	Parent=FBgn0037327.1.mrna1;Target=FBgn0037327.1 2065 3444 +
Chr2	stalkie_big_nohaplotig	CDS	98573791	98574729	.	-	0	Parent=FBgn0037327.1.mrna1;Target=FBgn0037327.1 1126 2064 +
Chr2	stalkie_big_nohaplotig	CDS	98574789	98574968	.	-	0	Parent=FBgn0037327.1.mrna1;Target=FBgn0037327.1 946 1125 +
Chr2	stalkie_big_nohaplotig	CDS	98575542	98576247	.	-	1	Parent=FBgn0037327.1.mrna1;Target=FBgn0037327.1 240 945 +
Chr2	stalkie_big_nohaplotig	CDS	98586880	98587118	.	-	0	Parent=FBgn0037327.1.mrna1;Target=FBgn0037327.1 1 239 +
Chr2	gffcl	locus	98589591	98590900	.	-	.	ID=RLOC_00019843;geneIDs=comp154976_c0_seq1.path1;transcripts=comp154976_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98589591	98590900	.	-	.	ID=comp154976_c0_seq1.mrna1;geneID=comp154976_c0_seq1.path1;Name=comp154976_c0_seq1;Dir=antisensecoverage=98.9;identity=99.4;matches=1237;mismatches=8;indels=0;unknowns=0;locus=RLOC_00019843
Chr2	stalkie_big_nohaplotig	exon	98589591	98590131	100	-	.	Parent=comp154976_c0_seq1.mrna1;Target=comp154976_c0_seq1 6 546 -
Chr2	stalkie_big_nohaplotig	exon	98590197	98590900	98	-	.	Parent=comp154976_c0_seq1.mrna1;Target=comp154976_c0_seq1 547 1250 -
Chr2	stalkie_big_nohaplotig	CDS	98589839	98590131	.	-	2	Parent=comp154976_c0_seq1.mrna1;Target=comp154976_c0_seq1 254 546 .
Chr2	stalkie_big_nohaplotig	CDS	98590197	98590899	.	-	0	Parent=comp154976_c0_seq1.mrna1;Target=comp154976_c0_seq1 547 1249 .
Chr2	gffcl	locus	98591680	98603316	.	-	.	ID=RLOC_00019844;geneIDs=FBgn0039302.1.path1;transcripts=FBgn0039302.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98591680	98603316	.	-	.	ID=FBgn0039302.1.mrna1;geneID=FBgn0039302.1.path1;Name=FBgn0039302.1;Dir=sensecoverage=100.0;identity=99.8;matches=7380;mismatches=3;indels=9;unknowns=0;locus=RLOC_00019844
Chr2	stalkie_big_nohaplotig	exon	98591680	98591825	98	-	.	Parent=FBgn0039302.1.mrna1;Target=FBgn0039302.1 7247 7392 +
Chr2	stalkie_big_nohaplotig	exon	98591888	98592881	99	-	.	Parent=FBgn0039302.1.mrna1;Target=FBgn0039302.1 6244 7246 +
Chr2	stalkie_big_nohaplotig	exon	98592986	98596182	100	-	.	Parent=FBgn0039302.1.mrna1;Target=FBgn0039302.1 3047 6243 +
Chr2	stalkie_big_nohaplotig	exon	98596985	98598893	100	-	.	Parent=FBgn0039302.1.mrna1;Target=FBgn0039302.1 1138 3046 +
Chr2	stalkie_big_nohaplotig	exon	98598968	98600005	100	-	.	Parent=FBgn0039302.1.mrna1;Target=FBgn0039302.1 100 1137 +
Chr2	stalkie_big_nohaplotig	exon	98603218	98603316	100	-	.	Parent=FBgn0039302.1.mrna1;Target=FBgn0039302.1 1 99 +
Chr2	stalkie_big_nohaplotig	CDS	98591680	98591825	.	-	2	Parent=FBgn0039302.1.mrna1;Target=FBgn0039302.1 7247 7392 +
Chr2	stalkie_big_nohaplotig	CDS	98591888	98592881	.	-	0	Parent=FBgn0039302.1.mrna1;Target=FBgn0039302.1 6244 7246 +
Chr2	stalkie_big_nohaplotig	CDS	98592986	98596182	.	-	2	Parent=FBgn0039302.1.mrna1;Target=FBgn0039302.1 3047 6243 +
Chr2	stalkie_big_nohaplotig	CDS	98596985	98598893	.	-	0	Parent=FBgn0039302.1.mrna1;Target=FBgn0039302.1 1138 3046 +
Chr2	stalkie_big_nohaplotig	CDS	98598968	98600005	.	-	0	Parent=FBgn0039302.1.mrna1;Target=FBgn0039302.1 100 1137 +
Chr2	stalkie_big_nohaplotig	CDS	98603218	98603316	.	-	0	Parent=FBgn0039302.1.mrna1;Target=FBgn0039302.1 1 99 +
Chr2	gffcl	locus	98605552	98606407	.	+	.	ID=RLOC_00019845;geneIDs=FBgn0039300.1.path1,comp147678_c0_seq1.path1;transcripts=FBgn0039300.1.mrna1,comp147678_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98605552	98606407	.	+	.	ID=FBgn0039300.1.mrna1;geneID=FBgn0039300.1.path1;Name=FBgn0039300.1;Dir=sensecoverage=100.0;identity=100.0;matches=306;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019845
Chr2	stalkie_big_nohaplotig	exon	98605552	98605611	100	+	.	Parent=FBgn0039300.1.mrna1;Target=FBgn0039300.1 1 60 +
Chr2	stalkie_big_nohaplotig	exon	98606099	98606318	100	+	.	Parent=FBgn0039300.1.mrna1;Target=FBgn0039300.1 61 280 +
Chr2	stalkie_big_nohaplotig	exon	98606382	98606407	100	+	.	Parent=FBgn0039300.1.mrna1;Target=FBgn0039300.1 281 306 +
Chr2	stalkie_big_nohaplotig	CDS	98605552	98605611	.	+	0	Parent=FBgn0039300.1.mrna1;Target=FBgn0039300.1 1 60 +
Chr2	stalkie_big_nohaplotig	CDS	98606099	98606318	.	+	0	Parent=FBgn0039300.1.mrna1;Target=FBgn0039300.1 61 280 +
Chr2	stalkie_big_nohaplotig	CDS	98606382	98606407	.	+	2	Parent=FBgn0039300.1.mrna1;Target=FBgn0039300.1 281 306 +
Chr2	stalkie_big_nohaplotig	mRNA	98605588	98606122	.	+	.	ID=comp147678_c0_seq1.mrna1;geneID=comp147678_c0_seq1.path1;Name=comp147678_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=386;mismatches=0;indels=1;unknowns=0;Target=comp147678_c0_seq1 89 178 .;locus=RLOC_00019845
Chr2	stalkie_big_nohaplotig	exon	98605588	98605949	99	+	.	Parent=comp147678_c0_seq1.mrna1;Target=comp147678_c0_seq1 25 387 -
Chr2	stalkie_big_nohaplotig	exon	98606099	98606122	100	+	.	Parent=comp147678_c0_seq1.mrna1;Target=comp147678_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	CDS	98605796	98605885	.	+	0	Parent=comp147678_c0_seq1.mrna1
Chr2	gffcl	locus	98611049	98613939	.	+	.	ID=RLOC_00019846;geneIDs=ORF173.path1;transcripts=ORF173.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98611049	98613939	.	+	.	ID=ORF173.mrna1;geneID=ORF173.path1;Name=ORF173;Dir=sensecoverage=100.0;identity=99.3;matches=2648;mismatches=19;indels=0;unknowns=0;locus=RLOC_00019846
Chr2	stalkie_big_nohaplotig	exon	98611049	98611545	98	+	.	Parent=ORF173.mrna1;Target=ORF173 1 497 +
Chr2	stalkie_big_nohaplotig	exon	98611690	98612060	99	+	.	Parent=ORF173.mrna1;Target=ORF173 498 868 +
Chr2	stalkie_big_nohaplotig	exon	98612141	98613939	99	+	.	Parent=ORF173.mrna1;Target=ORF173 869 2667 +
Chr2	stalkie_big_nohaplotig	CDS	98611049	98611545	.	+	0	Parent=ORF173.mrna1;Target=ORF173 1 497 +
Chr2	stalkie_big_nohaplotig	CDS	98611690	98612060	.	+	1	Parent=ORF173.mrna1;Target=ORF173 498 868 +
Chr2	stalkie_big_nohaplotig	CDS	98612141	98613939	.	+	2	Parent=ORF173.mrna1;Target=ORF173 869 2667 +
Chr2	gffcl	locus	98619609	98620363	.	+	.	ID=RLOC_00019847;geneIDs=comp153620_c0_seq1.path1;transcripts=comp153620_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98619609	98620363	.	+	.	ID=comp153620_c0_seq1.mrna1;geneID=comp153620_c0_seq1.path1;Name=comp153620_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.5;matches=751;mismatches=4;indels=0;unknowns=0;Target=comp153620_c0_seq1 759 5 .;CDS_Target=comp153620_c0_seq1 489 415 .;locus=RLOC_00019847
Chr2	stalkie_big_nohaplotig	exon	98619609	98620363	99	+	.	Parent=comp153620_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98620019	98620093	.	+	0	Parent=comp153620_c0_seq1.mrna1
Chr2	gffcl	locus	98697050	98697863	.	-	.	ID=RLOC_00019848;geneIDs=comp145894_c0_seq1.path1;transcripts=comp145894_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98697050	98697863	.	-	.	ID=comp145894_c0_seq1.mrna1;geneID=comp145894_c0_seq1.path1;Name=comp145894_c0_seq1;Dir=indeterminatecoverage=98.5;identity=98.5;matches=784;mismatches=11;indels=1;unknowns=0;Target=comp145894_c0_seq1 584 441 .;locus=RLOC_00019848
Chr2	stalkie_big_nohaplotig	exon	98697050	98697808	98	-	.	Parent=comp145894_c0_seq1.mrna1;Target=comp145894_c0_seq1 812 55 .
Chr2	stalkie_big_nohaplotig	exon	98697827	98697863	91	-	.	Parent=comp145894_c0_seq1.mrna1;Target=comp145894_c0_seq1 49 13 .
Chr2	stalkie_big_nohaplotig	CDS	98697278	98697421	.	-	0	Parent=comp145894_c0_seq1.mrna1
Chr2	gffcl	locus	98737929	98747494	.	-	.	ID=RLOC_00019849;geneIDs=comp148950_c0_seq1.path1;transcripts=comp148950_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98737929	98747494	.	-	.	ID=comp148950_c0_seq1.mrna1;geneID=comp148950_c0_seq1.path1;Name=comp148950_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=1388;mismatches=4;indels=0;unknowns=0;locus=RLOC_00019849
Chr2	stalkie_big_nohaplotig	exon	98737929	98738056	97	-	.	Parent=comp148950_c0_seq1.mrna1;Target=comp148950_c0_seq1 1 128 -
Chr2	stalkie_big_nohaplotig	exon	98738122	98738301	100	-	.	Parent=comp148950_c0_seq1.mrna1;Target=comp148950_c0_seq1 129 308 -
Chr2	stalkie_big_nohaplotig	exon	98746411	98747494	99	-	.	Parent=comp148950_c0_seq1.mrna1;Target=comp148950_c0_seq1 309 1392 -
Chr2	stalkie_big_nohaplotig	CDS	98738022	98738056	.	-	2	Parent=comp148950_c0_seq1.mrna1;Target=comp148950_c0_seq1 94 128 .
Chr2	stalkie_big_nohaplotig	CDS	98738122	98738301	.	-	2	Parent=comp148950_c0_seq1.mrna1;Target=comp148950_c0_seq1 129 308 .
Chr2	stalkie_big_nohaplotig	CDS	98746411	98746438	.	-	0	Parent=comp148950_c0_seq1.mrna1;Target=comp148950_c0_seq1 309 336 .
Chr2	gffcl	locus	98755297	98755675	.	-	.	ID=RLOC_00019850;geneIDs=comp144480_c0_seq1.path1;transcripts=comp144480_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98755297	98755675	.	-	.	ID=comp144480_c0_seq1.mrna1;geneID=comp144480_c0_seq1.path1;Name=comp144480_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.0;matches=364;mismatches=7;indels=8;unknowns=0;Target=comp144480_c0_seq1 371 1 .;CDS_Target=comp144480_c0_seq1 244 128 .;locus=RLOC_00019850
Chr2	stalkie_big_nohaplotig	exon	98755297	98755675	96	-	.	Parent=comp144480_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98755424	98755540	.	-	0	Parent=comp144480_c0_seq1.mrna1
Chr2	gffcl	locus	98756043	98756715	.	+	.	ID=RLOC_00019851;geneIDs=comp147270_c2_seq1.path1;transcripts=comp147270_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98756043	98756715	.	+	.	ID=comp147270_c2_seq1.mrna1;geneID=comp147270_c2_seq1.path1;Name=comp147270_c2_seq1;Dir=indeterminatecoverage=98.2;identity=96.0;matches=651;mismatches=5;indels=22;unknowns=0;Target=comp147270_c2_seq1 673 13 .;CDS_Target=comp147270_c2_seq1 650 582 .;locus=RLOC_00019851
Chr2	stalkie_big_nohaplotig	exon	98756043	98756715	96	+	.	Parent=comp147270_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98756624	98756692	.	+	0	Parent=comp147270_c2_seq1.mrna1
Chr2	gffcl	locus	98759164	98765603	.	-	.	ID=RLOC_00019852;geneIDs=FBgn0039297.2.path1;transcripts=FBgn0039297.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98759164	98765603	.	-	.	ID=FBgn0039297.2.mrna1;geneID=FBgn0039297.2.path1;Name=FBgn0039297.2;Dir=sensecoverage=100.0;identity=99.9;matches=788;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019852
Chr2	stalkie_big_nohaplotig	exon	98759164	98759362	100	-	.	Parent=FBgn0039297.2.mrna1;Target=FBgn0039297.2 591 789 +
Chr2	stalkie_big_nohaplotig	exon	98759436	98759919	99	-	.	Parent=FBgn0039297.2.mrna1;Target=FBgn0039297.2 107 590 +
Chr2	stalkie_big_nohaplotig	exon	98765498	98765603	100	-	.	Parent=FBgn0039297.2.mrna1;Target=FBgn0039297.2 1 106 +
Chr2	stalkie_big_nohaplotig	CDS	98759164	98759362	.	-	1	Parent=FBgn0039297.2.mrna1;Target=FBgn0039297.2 591 789 +
Chr2	stalkie_big_nohaplotig	CDS	98759436	98759919	.	-	2	Parent=FBgn0039297.2.mrna1;Target=FBgn0039297.2 107 590 +
Chr2	stalkie_big_nohaplotig	CDS	98765498	98765603	.	-	0	Parent=FBgn0039297.2.mrna1;Target=FBgn0039297.2 1 106 +
Chr2	gffcl	locus	98770090	98770688	.	+	.	ID=RLOC_00019853;geneIDs=comp102776_c0_seq1.path1;transcripts=comp102776_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98770090	98770688	.	+	.	ID=comp102776_c0_seq1.mrna1;geneID=comp102776_c0_seq1.path1;Name=comp102776_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=598;mismatches=1;indels=0;unknowns=0;Target=comp102776_c0_seq1 599 1 .;CDS_Target=comp102776_c0_seq1 598 521 .;locus=RLOC_00019853
Chr2	stalkie_big_nohaplotig	exon	98770090	98770688	99	+	.	Parent=comp102776_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98770610	98770687	.	+	0	Parent=comp102776_c0_seq1.mrna1
Chr2	gffcl	locus	98780717	98796087	.	-	.	ID=RLOC_00019854;geneIDs=FBgn0011672.1.path1,comp117333_c0_seq1.path1;transcripts=FBgn0011672.1.mrna1,comp117333_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98780717	98796087	.	-	.	ID=FBgn0011672.1.mrna1;geneID=FBgn0011672.1.path1;Name=FBgn0011672.1;Dir=sensecoverage=99.4;identity=99.9;matches=1778;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019854
Chr2	stalkie_big_nohaplotig	exon	98780717	98780771	100	-	.	Parent=FBgn0011672.1.mrna1;Target=FBgn0011672.1 1737 1791 +
Chr2	stalkie_big_nohaplotig	exon	98784118	98784188	100	-	.	Parent=FBgn0011672.1.mrna1;Target=FBgn0011672.1 1666 1736 +
Chr2	stalkie_big_nohaplotig	exon	98785679	98785770	100	-	.	Parent=FBgn0011672.1.mrna1;Target=FBgn0011672.1 1574 1665 +
Chr2	stalkie_big_nohaplotig	exon	98785846	98785961	100	-	.	Parent=FBgn0011672.1.mrna1;Target=FBgn0011672.1 1458 1573 +
Chr2	stalkie_big_nohaplotig	exon	98786046	98786491	100	-	.	Parent=FBgn0011672.1.mrna1;Target=FBgn0011672.1 1012 1457 +
Chr2	stalkie_big_nohaplotig	exon	98786558	98786716	100	-	.	Parent=FBgn0011672.1.mrna1;Target=FBgn0011672.1 853 1011 +
Chr2	stalkie_big_nohaplotig	exon	98786790	98786945	100	-	.	Parent=FBgn0011672.1.mrna1;Target=FBgn0011672.1 697 852 +
Chr2	stalkie_big_nohaplotig	exon	98791553	98791691	100	-	.	Parent=FBgn0011672.1.mrna1;Target=FBgn0011672.1 558 696 +
Chr2	stalkie_big_nohaplotig	exon	98791810	98791974	100	-	.	Parent=FBgn0011672.1.mrna1;Target=FBgn0011672.1 393 557 +
Chr2	stalkie_big_nohaplotig	exon	98792055	98792239	99	-	.	Parent=FBgn0011672.1.mrna1;Target=FBgn0011672.1 208 392 +
Chr2	stalkie_big_nohaplotig	exon	98795892	98796087	99	-	.	Parent=FBgn0011672.1.mrna1;Target=FBgn0011672.1 12 207 +
Chr2	stalkie_big_nohaplotig	CDS	98780717	98780771	.	-	1	Parent=FBgn0011672.1.mrna1;Target=FBgn0011672.1 1737 1791 +
Chr2	stalkie_big_nohaplotig	CDS	98784118	98784188	.	-	0	Parent=FBgn0011672.1.mrna1;Target=FBgn0011672.1 1666 1736 +
Chr2	stalkie_big_nohaplotig	CDS	98785679	98785770	.	-	2	Parent=FBgn0011672.1.mrna1;Target=FBgn0011672.1 1574 1665 +
Chr2	stalkie_big_nohaplotig	CDS	98785846	98785961	.	-	1	Parent=FBgn0011672.1.mrna1;Target=FBgn0011672.1 1458 1573 +
Chr2	stalkie_big_nohaplotig	CDS	98786046	98786491	.	-	0	Parent=FBgn0011672.1.mrna1;Target=FBgn0011672.1 1012 1457 +
Chr2	stalkie_big_nohaplotig	CDS	98786558	98786716	.	-	0	Parent=FBgn0011672.1.mrna1;Target=FBgn0011672.1 853 1011 +
Chr2	stalkie_big_nohaplotig	CDS	98786790	98786945	.	-	0	Parent=FBgn0011672.1.mrna1;Target=FBgn0011672.1 697 852 +
Chr2	stalkie_big_nohaplotig	CDS	98791553	98791691	.	-	1	Parent=FBgn0011672.1.mrna1;Target=FBgn0011672.1 558 696 +
Chr2	stalkie_big_nohaplotig	CDS	98791810	98791974	.	-	1	Parent=FBgn0011672.1.mrna1;Target=FBgn0011672.1 393 557 +
Chr2	stalkie_big_nohaplotig	CDS	98792055	98792239	.	-	0	Parent=FBgn0011672.1.mrna1;Target=FBgn0011672.1 208 392 +
Chr2	stalkie_big_nohaplotig	CDS	98795892	98796086	.	-	0	Parent=FBgn0011672.1.mrna1;Target=FBgn0011672.1 13 207 +
Chr2	stalkie_big_nohaplotig	mRNA	98783610	98784141	.	-	.	ID=comp117333_c0_seq1.mrna1;geneID=comp117333_c0_seq1.path1;Name=comp117333_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=532;mismatches=0;indels=0;unknowns=0;Target=comp117333_c0_seq1 532 1 .;CDS_Target=comp117333_c0_seq1 236 144 .;locus=RLOC_00019854
Chr2	stalkie_big_nohaplotig	exon	98783610	98784141	100	-	.	Parent=comp117333_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98783906	98783998	.	-	0	Parent=comp117333_c0_seq1.mrna1
Chr2	gffcl	locus	98819959	98822047	.	-	.	ID=RLOC_00019855;geneIDs=FBgn0025865.1.path1;transcripts=FBgn0025865.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98819959	98822047	.	-	.	ID=FBgn0025865.1.mrna1;geneID=FBgn0025865.1.path1;Name=FBgn0025865.1;Dir=sensecoverage=98.5;identity=98.3;matches=1754;mismatches=13;indels=18;unknowns=0;locus=RLOC_00019855
Chr2	stalkie_big_nohaplotig	exon	98819959	98820048	98	-	.	Parent=FBgn0025865.1.mrna1;Target=FBgn0025865.1 1714 1803 +
Chr2	stalkie_big_nohaplotig	exon	98820106	98821095	97	-	.	Parent=FBgn0025865.1.mrna1;Target=FBgn0025865.1 724 1713 +
Chr2	stalkie_big_nohaplotig	exon	98821230	98821351	100	-	.	Parent=FBgn0025865.1.mrna1;Target=FBgn0025865.1 602 723 +
Chr2	stalkie_big_nohaplotig	exon	98821416	98821819	99	-	.	Parent=FBgn0025865.1.mrna1;Target=FBgn0025865.1 198 601 +
Chr2	stalkie_big_nohaplotig	exon	98821878	98822047	98	-	.	Parent=FBgn0025865.1.mrna1;Target=FBgn0025865.1 28 197 +
Chr2	stalkie_big_nohaplotig	CDS	98819959	98820048	.	-	0	Parent=FBgn0025865.1.mrna1;Target=FBgn0025865.1 1714 1803 +
Chr2	stalkie_big_nohaplotig	CDS	98820106	98821095	.	-	0	Parent=FBgn0025865.1.mrna1;Target=FBgn0025865.1 724 1713 +
Chr2	stalkie_big_nohaplotig	CDS	98821230	98821351	.	-	2	Parent=FBgn0025865.1.mrna1;Target=FBgn0025865.1 602 723 +
Chr2	stalkie_big_nohaplotig	CDS	98821416	98821819	.	-	1	Parent=FBgn0025865.1.mrna1;Target=FBgn0025865.1 198 601 +
Chr2	stalkie_big_nohaplotig	CDS	98821878	98822047	.	-	0	Parent=FBgn0025865.1.mrna1;Target=FBgn0025865.1 28 197 +
Chr2	gffcl	locus	98824163	98825615	.	+	.	ID=RLOC_00019856;geneIDs=FBgn0037351.1.path1,comp261518_c0_seq1.path1;transcripts=FBgn0037351.1.mrna1,comp261518_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98824163	98825615	.	+	.	ID=FBgn0037351.1.mrna1;geneID=FBgn0037351.1.path1;Name=FBgn0037351.1;Dir=sensecoverage=100.0;identity=100.0;matches=681;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019856
Chr2	stalkie_big_nohaplotig	exon	98824163	98824249	100	+	.	Parent=FBgn0037351.1.mrna1;Target=FBgn0037351.1 1 87 +
Chr2	stalkie_big_nohaplotig	exon	98824661	98824901	100	+	.	Parent=FBgn0037351.1.mrna1;Target=FBgn0037351.1 88 328 +
Chr2	stalkie_big_nohaplotig	exon	98825263	98825615	100	+	.	Parent=FBgn0037351.1.mrna1;Target=FBgn0037351.1 329 681 +
Chr2	stalkie_big_nohaplotig	CDS	98824163	98824249	.	+	0	Parent=FBgn0037351.1.mrna1;Target=FBgn0037351.1 1 87 +
Chr2	stalkie_big_nohaplotig	CDS	98824661	98824901	.	+	0	Parent=FBgn0037351.1.mrna1;Target=FBgn0037351.1 88 328 +
Chr2	stalkie_big_nohaplotig	CDS	98825263	98825615	.	+	2	Parent=FBgn0037351.1.mrna1;Target=FBgn0037351.1 329 681 +
Chr2	stalkie_big_nohaplotig	mRNA	98824879	98825283	.	+	.	ID=comp261518_c0_seq1.mrna1;geneID=comp261518_c0_seq1.path1;Name=comp261518_c0_seq1;Dir=sensecoverage=100.0;identity=98.7;matches=223;mismatches=1;indels=2;unknowns=0;locus=RLOC_00019856
Chr2	stalkie_big_nohaplotig	exon	98824879	98824901	100	+	.	Parent=comp261518_c0_seq1.mrna1;Target=comp261518_c0_seq1 1 23 +
Chr2	stalkie_big_nohaplotig	exon	98825081	98825283	98	+	.	Parent=comp261518_c0_seq1.mrna1;Target=comp261518_c0_seq1 24 224 +
Chr2	stalkie_big_nohaplotig	CDS	98824881	98824901	.	+	0	Parent=comp261518_c0_seq1.mrna1;Target=comp261518_c0_seq1 3 23 +
Chr2	stalkie_big_nohaplotig	CDS	98825081	98825158	.	+	0	Parent=comp261518_c0_seq1.mrna1;Target=comp261518_c0_seq1 24 101 +
Chr2	gffcl	locus	98825707	98827534	.	.	.	ID=RLOC_00019857;geneIDs=FBgn0051548.1.path1,comp146221_c0_seq1.path1;transcripts=comp146221_c0_seq1.mrna1,FBgn0051548.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98825707	98827534	.	+	.	ID=comp146221_c0_seq1.mrna1;geneID=comp146221_c0_seq1.path1;Name=comp146221_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.9;matches=1077;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019857
Chr2	stalkie_big_nohaplotig	exon	98825707	98825869	100	+	.	Parent=comp146221_c0_seq1.mrna1;Target=comp146221_c0_seq1 181 19 .
Chr2	stalkie_big_nohaplotig	exon	98826620	98827534	99	+	.	Parent=comp146221_c0_seq1.mrna1;Target=comp146221_c0_seq1 1096 182 .
Chr2	stalkie_big_nohaplotig	CDS	98825707	98825869	.	+	0	Parent=comp146221_c0_seq1.mrna1;Target=comp146221_c0_seq1 181 19 .
Chr2	stalkie_big_nohaplotig	CDS	98826620	98826867	.	+	2	Parent=comp146221_c0_seq1.mrna1;Target=comp146221_c0_seq1 429 182 .
Chr2	stalkie_big_nohaplotig	mRNA	98826585	98827475	.	-	.	ID=FBgn0051548.1.mrna1;geneID=FBgn0051548.1.path1;Name=FBgn0051548.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=888;mismatches=3;indels=0;unknowns=0;Target=FBgn0051548.1 891 1 .;locus=RLOC_00019857
Chr2	stalkie_big_nohaplotig	exon	98826585	98827475	99	-	.	Parent=FBgn0051548.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98826585	98827475	.	-	0	Parent=FBgn0051548.1.mrna1
Chr2	gffcl	locus	98827658	98828461	.	-	.	ID=RLOC_00019858;geneIDs=FBgn0051549.2.path1;transcripts=FBgn0051549.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98827658	98828461	.	-	.	ID=FBgn0051549.2.mrna1;geneID=FBgn0051549.2.path1;Name=FBgn0051549.2;Dir=indeterminatecoverage=100.0;identity=99.9;matches=803;mismatches=1;indels=0;unknowns=0;Target=FBgn0051549.2 804 1 .;locus=RLOC_00019858
Chr2	stalkie_big_nohaplotig	exon	98827658	98828461	99	-	.	Parent=FBgn0051549.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98827658	98828461	.	-	0	Parent=FBgn0051549.2.mrna1
Chr2	gffcl	locus	98829329	98830123	.	-	.	ID=RLOC_00019859;geneIDs=FBgn0051549.1.path1;transcripts=FBgn0051549.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98829329	98830123	.	-	.	ID=FBgn0051549.1.mrna1;geneID=FBgn0051549.1.path1;Name=FBgn0051549.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=795;mismatches=0;indels=0;unknowns=0;Target=FBgn0051549.1 795 1 .;locus=RLOC_00019859
Chr2	stalkie_big_nohaplotig	exon	98829329	98830123	100	-	.	Parent=FBgn0051549.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98829329	98830123	.	-	0	Parent=FBgn0051549.1.mrna1
Chr2	gffcl	locus	98831674	98832471	.	-	.	ID=RLOC_00019860;geneIDs=FBgn0051548.2.path1;transcripts=FBgn0051548.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98831674	98832471	.	-	.	ID=FBgn0051548.2.mrna1;geneID=FBgn0051548.2.path1;Name=FBgn0051548.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=798;mismatches=0;indels=0;unknowns=0;Target=FBgn0051548.2 798 1 .;locus=RLOC_00019860
Chr2	stalkie_big_nohaplotig	exon	98831674	98832471	100	-	.	Parent=FBgn0051548.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98831674	98832471	.	-	0	Parent=FBgn0051548.2.mrna1
Chr2	gffcl	locus	98833152	98833630	.	-	.	ID=RLOC_00019861;geneIDs=comp149705_c1_seq1.path1;transcripts=comp149705_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98833152	98833630	.	-	.	ID=comp149705_c1_seq1.mrna1;geneID=comp149705_c1_seq1.path1;Name=comp149705_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=476;mismatches=3;indels=0;unknowns=0;Target=comp149705_c1_seq1 479 1 .;CDS_Target=comp149705_c1_seq1 117 1 .;locus=RLOC_00019861
Chr2	stalkie_big_nohaplotig	exon	98833152	98833630	99	-	.	Parent=comp149705_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98833514	98833630	.	-	0	Parent=comp149705_c1_seq1.mrna1
Chr2	gffcl	locus	98834746	98835663	.	.	.	ID=RLOC_00019862;geneIDs=comp115841_c0_seq1.path1,comp129052_c0_seq1.path1;transcripts=comp129052_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98834746	98835468	.	+	.	ID=comp129052_c0_seq1.mrna1;geneID=comp129052_c0_seq1.path1;Name=comp129052_c0_seq1;Dir=indeterminatecoverage=99.0;identity=97.1;matches=709;mismatches=7;indels=14;unknowns=0;Target=comp129052_c0_seq1 726 4 .;CDS_Target=comp129052_c0_seq1 119 6 .;locus=RLOC_00019862
Chr2	stalkie_big_nohaplotig	exon	98834746	98835468	97	+	.	Parent=comp129052_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98834748	98834861	.	+	0	Parent=comp129052_c0_seq1.mrna1
Chr2	gffcl	locus	98837313	98840199	.	-	.	ID=RLOC_00019863;geneIDs=comp162697_c0_seq1.path1;transcripts=comp162697_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98837313	98840199	.	-	.	ID=comp162697_c0_seq1.mrna1;geneID=comp162697_c0_seq1.path1;Name=comp162697_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.8;matches=2883;mismatches=3;indels=3;unknowns=0;Target=comp162697_c0_seq1 2905 18 .;CDS_Target=comp162697_c0_seq1 845 714 .;locus=RLOC_00019863
Chr2	stalkie_big_nohaplotig	exon	98837313	98840199	99	-	.	Parent=comp162697_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98839371	98839502	.	-	0	Parent=comp162697_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98841072	98869591	.	-	.	ID=FBgn0026620.1.mrna1;geneID=FBgn0026620.1.path1;Name=FBgn0026620.1;Dir=sensecoverage=100.0;identity=100.0;matches=3872;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019864
Chr2	stalkie_big_nohaplotig	exon	98841072	98841252	100	-	.	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 3693 3873 +
Chr2	stalkie_big_nohaplotig	exon	98842601	98842750	100	-	.	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 3543 3692 +
Chr2	stalkie_big_nohaplotig	exon	98842819	98842980	100	-	.	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 3381 3542 +
Chr2	stalkie_big_nohaplotig	exon	98843752	98843856	100	-	.	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 3276 3380 +
Chr2	stalkie_big_nohaplotig	exon	98845288	98845356	100	-	.	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 3207 3275 +
Chr2	stalkie_big_nohaplotig	exon	98845430	98845506	100	-	.	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 3130 3206 +
Chr2	stalkie_big_nohaplotig	exon	98845577	98845812	100	-	.	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 2894 3129 +
Chr2	stalkie_big_nohaplotig	exon	98860633	98861069	99	-	.	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 2457 2893 +
Chr2	stalkie_big_nohaplotig	exon	98861298	98862804	100	-	.	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 950 2456 +
Chr2	stalkie_big_nohaplotig	exon	98862874	98862936	100	-	.	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 887 949 +
Chr2	stalkie_big_nohaplotig	exon	98864112	98864177	100	-	.	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 821 886 +
Chr2	stalkie_big_nohaplotig	exon	98864242	98864485	100	-	.	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 577 820 +
Chr2	stalkie_big_nohaplotig	exon	98869016	98869591	100	-	.	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 1 576 +
Chr2	stalkie_big_nohaplotig	CDS	98841072	98841252	.	-	1	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 3693 3873 +
Chr2	stalkie_big_nohaplotig	CDS	98842601	98842750	.	-	1	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 3543 3692 +
Chr2	stalkie_big_nohaplotig	CDS	98842819	98842980	.	-	1	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 3381 3542 +
Chr2	stalkie_big_nohaplotig	CDS	98843752	98843856	.	-	1	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 3276 3380 +
Chr2	stalkie_big_nohaplotig	CDS	98845288	98845356	.	-	1	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 3207 3275 +
Chr2	stalkie_big_nohaplotig	CDS	98845430	98845506	.	-	0	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 3130 3206 +
Chr2	stalkie_big_nohaplotig	CDS	98845577	98845812	.	-	2	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 2894 3129 +
Chr2	stalkie_big_nohaplotig	CDS	98860633	98861069	.	-	1	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 2457 2893 +
Chr2	stalkie_big_nohaplotig	CDS	98861298	98862804	.	-	2	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 950 2456 +
Chr2	stalkie_big_nohaplotig	CDS	98862874	98862936	.	-	2	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 887 949 +
Chr2	stalkie_big_nohaplotig	CDS	98864112	98864177	.	-	2	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 821 886 +
Chr2	stalkie_big_nohaplotig	CDS	98864242	98864485	.	-	0	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 577 820 +
Chr2	stalkie_big_nohaplotig	CDS	98869016	98869591	.	-	0	Parent=FBgn0026620.1.mrna1;Target=FBgn0026620.1 1 576 +
Chr2	stalkie_big_nohaplotig	mRNA	98845767	98926437	.	-	.	ID=comp152049_c0_seq1.mrna1;geneID=comp152049_c0_seq1.path1;Name=comp152049_c0_seq1;Dir=antisensecoverage=74.2;identity=99.2;matches=754;mismatches=5;indels=1;unknowns=0;Target=comp152049_c0_seq1 159 383 .;locus=RLOC_00019864
Chr2	stalkie_big_nohaplotig	exon	98845767	98845812	97	-	.	Parent=comp152049_c0_seq1.mrna1;Target=comp152049_c0_seq1 1 46 -
Chr2	stalkie_big_nohaplotig	exon	98852690	98853367	99	-	.	Parent=comp152049_c0_seq1.mrna1;Target=comp152049_c0_seq1 47 725 -
Chr2	stalkie_big_nohaplotig	exon	98857889	98857895	100	-	.	Parent=comp152049_c0_seq1.mrna1;Target=comp152049_c0_seq1 726 732 -
Chr2	stalkie_big_nohaplotig	exon	98879929	98879936	100	-	.	Parent=comp152049_c0_seq1.mrna1;Target=comp152049_c0_seq1 733 740 -
Chr2	stalkie_big_nohaplotig	exon	98886360	98886361	100	-	.	Parent=comp152049_c0_seq1.mrna1;Target=comp152049_c0_seq1 741 742 -
Chr2	stalkie_big_nohaplotig	exon	98894400	98894403	100	-	.	Parent=comp152049_c0_seq1.mrna1;Target=comp152049_c0_seq1 743 746 -
Chr2	stalkie_big_nohaplotig	exon	98923216	98923220	100	-	.	Parent=comp152049_c0_seq1.mrna1;Target=comp152049_c0_seq1 747 751 -
Chr2	stalkie_big_nohaplotig	exon	98926429	98926437	100	-	.	Parent=comp152049_c0_seq1.mrna1;Target=comp152049_c0_seq1 752 760 -
Chr2	stalkie_big_nohaplotig	CDS	98852802	98853026	.	-	0	Parent=comp152049_c0_seq1.mrna1
Chr2	gffcl	locus	98871458	98885263	.	+	.	ID=RLOC_00019865;geneIDs=comp147070_c0_seq1.path1;transcripts=comp147070_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98871458	98885263	.	+	.	ID=comp147070_c0_seq1.mrna1;geneID=comp147070_c0_seq1.path1;Name=comp147070_c0_seq1;Dir=sensecoverage=100.0;identity=95.7;matches=594;mismatches=5;indels=22;unknowns=0;locus=RLOC_00019865
Chr2	stalkie_big_nohaplotig	exon	98871458	98871517	100	+	.	Parent=comp147070_c0_seq1.mrna1;Target=comp147070_c0_seq1 1 60 +
Chr2	stalkie_big_nohaplotig	exon	98872132	98872279	84	+	.	Parent=comp147070_c0_seq1.mrna1;Target=comp147070_c0_seq1 61 208 +
Chr2	stalkie_big_nohaplotig	exon	98884862	98885263	99	+	.	Parent=comp147070_c0_seq1.mrna1;Target=comp147070_c0_seq1 209 610 +
Chr2	stalkie_big_nohaplotig	CDS	98872215	98872279	.	+	0	Parent=comp147070_c0_seq1.mrna1;Target=comp147070_c0_seq1 144 208 +
Chr2	stalkie_big_nohaplotig	CDS	98884862	98885114	.	+	1	Parent=comp147070_c0_seq1.mrna1;Target=comp147070_c0_seq1 209 461 +
Chr2	gffcl	locus	98879956	98880271	.	-	.	ID=RLOC_00019866;geneIDs=comp119331_c0_seq1.path1;transcripts=comp119331_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98879956	98880271	.	-	.	ID=comp119331_c0_seq1.mrna1;geneID=comp119331_c0_seq1.path1;Name=comp119331_c0_seq1;Dir=indeterminatecoverage=80.4;identity=99.4;matches=314;mismatches=2;indels=0;unknowns=0;Target=comp119331_c0_seq1 316 1 .;CDS_Target=comp119331_c0_seq1 24 1 .;locus=RLOC_00019866
Chr2	stalkie_big_nohaplotig	exon	98879956	98880271	99	-	.	Parent=comp119331_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98880248	98880271	.	-	0	Parent=comp119331_c0_seq1.mrna1
Chr2	gffcl	locus	98913104	98913940	.	+	.	ID=RLOC_00019867;geneIDs=FBgn0032368.2.path1;transcripts=FBgn0032368.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	98913104	98913940	.	+	.	ID=FBgn0032368.2.mrna1;geneID=FBgn0032368.2.path1;Name=FBgn0032368.2;Dir=indeterminatecoverage=100.0;identity=99.9;matches=836;mismatches=1;indels=0;unknowns=0;Target=FBgn0032368.2 837 1 .;locus=RLOC_00019867
Chr2	stalkie_big_nohaplotig	exon	98913104	98913940	99	+	.	Parent=FBgn0032368.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	98913104	98913940	.	+	0	Parent=FBgn0032368.2.mrna1
Chr2	gffcl	locus	99007508	99008419	.	+	.	ID=RLOC_00019868;geneIDs=comp151615_c0_seq1.path1;transcripts=comp151615_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99007508	99008419	.	+	.	ID=comp151615_c0_seq1.mrna1;geneID=comp151615_c0_seq1.path1;Name=comp151615_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=731;mismatches=2;indels=0;unknowns=0;Target=comp151615_c0_seq1 140 247 +;locus=RLOC_00019868
Chr2	stalkie_big_nohaplotig	exon	99007508	99007617	98	+	.	Parent=comp151615_c0_seq1.mrna1;Target=comp151615_c0_seq1 1 110 +
Chr2	stalkie_big_nohaplotig	exon	99007797	99008419	100	+	.	Parent=comp151615_c0_seq1.mrna1;Target=comp151615_c0_seq1 111 733 +
Chr2	stalkie_big_nohaplotig	CDS	99007826	99007933	.	+	0	Parent=comp151615_c0_seq1.mrna1
Chr2	gffcl	locus	99009573	99013360	.	+	.	ID=RLOC_00019869;geneIDs=FBgn0040284.2.path1;transcripts=FBgn0040284.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99009573	99013360	.	+	.	ID=FBgn0040284.2.mrna1;geneID=FBgn0040284.2.path1;Name=FBgn0040284.2;Dir=sensecoverage=100.0;identity=100.0;matches=759;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019869
Chr2	stalkie_big_nohaplotig	exon	99009573	99009769	100	+	.	Parent=FBgn0040284.2.mrna1;Target=FBgn0040284.2 1 197 +
Chr2	stalkie_big_nohaplotig	exon	99009907	99010276	100	+	.	Parent=FBgn0040284.2.mrna1;Target=FBgn0040284.2 198 567 +
Chr2	stalkie_big_nohaplotig	exon	99013108	99013187	100	+	.	Parent=FBgn0040284.2.mrna1;Target=FBgn0040284.2 568 647 +
Chr2	stalkie_big_nohaplotig	exon	99013249	99013360	100	+	.	Parent=FBgn0040284.2.mrna1;Target=FBgn0040284.2 648 759 +
Chr2	stalkie_big_nohaplotig	CDS	99009573	99009769	.	+	0	Parent=FBgn0040284.2.mrna1;Target=FBgn0040284.2 1 197 +
Chr2	stalkie_big_nohaplotig	CDS	99009907	99010276	.	+	1	Parent=FBgn0040284.2.mrna1;Target=FBgn0040284.2 198 567 +
Chr2	stalkie_big_nohaplotig	CDS	99013108	99013187	.	+	0	Parent=FBgn0040284.2.mrna1;Target=FBgn0040284.2 568 647 +
Chr2	stalkie_big_nohaplotig	CDS	99013249	99013360	.	+	1	Parent=FBgn0040284.2.mrna1;Target=FBgn0040284.2 648 759 +
Chr2	gffcl	locus	99014486	99015898	.	+	.	ID=RLOC_00019870;geneIDs=comp154145_c0_seq1.path1;transcripts=comp154145_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99014486	99015898	.	+	.	ID=comp154145_c0_seq1.mrna1;geneID=comp154145_c0_seq1.path1;Name=comp154145_c0_seq1;Dir=indeterminatecoverage=61.0;identity=98.5;matches=1400;mismatches=4;indels=17;unknowns=0;Target=comp154145_c0_seq1 2313 902 .;CDS_Target=comp154145_c0_seq1 1592 1329 .;locus=RLOC_00019870
Chr2	stalkie_big_nohaplotig	exon	99014486	99015898	98	+	.	Parent=comp154145_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99014915	99015178	.	+	0	Parent=comp154145_c0_seq1.mrna1
Chr2	gffcl	locus	99093590	99094516	.	+	.	ID=RLOC_00019871;geneIDs=comp147895_c0_seq1.path1;transcripts=comp147895_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99093590	99094516	.	+	.	ID=comp147895_c0_seq1.mrna1;geneID=comp147895_c0_seq1.path1;Name=comp147895_c0_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=826;mismatches=3;indels=2;unknowns=0;Target=comp147895_c0_seq1 3 149 +;locus=RLOC_00019871
Chr2	stalkie_big_nohaplotig	exon	99093590	99094207	100	+	.	Parent=comp147895_c0_seq1.mrna1;Target=comp147895_c0_seq1 1 618 +
Chr2	stalkie_big_nohaplotig	exon	99094306	99094516	97	+	.	Parent=comp147895_c0_seq1.mrna1;Target=comp147895_c0_seq1 619 831 +
Chr2	stalkie_big_nohaplotig	CDS	99093592	99093738	.	+	0	Parent=comp147895_c0_seq1.mrna1
Chr2	gffcl	locus	99106053	99106904	.	-	.	ID=RLOC_00019873;geneIDs=FBgn0033344.1.path1;transcripts=FBgn0033344.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99106053	99106904	.	-	.	ID=FBgn0033344.1.mrna1;geneID=FBgn0033344.1.path1;Name=FBgn0033344.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=852;mismatches=0;indels=0;unknowns=0;Target=FBgn0033344.1 852 1 .;locus=RLOC_00019873
Chr2	stalkie_big_nohaplotig	exon	99106053	99106904	100	-	.	Parent=FBgn0033344.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99106053	99106904	.	-	0	Parent=FBgn0033344.1.mrna1
Chr2	gffcl	locus	99126295	99127248	.	+	.	ID=RLOC_00019874;geneIDs=comp150860_c0_seq1.path1;transcripts=comp150860_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99126295	99127248	.	+	.	ID=comp150860_c0_seq1.mrna1;geneID=comp150860_c0_seq1.path1;Name=comp150860_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=942;mismatches=11;indels=9;unknowns=0;Target=comp150860_c0_seq1 961 1 .;CDS_Target=comp150860_c0_seq1 332 264 .;locus=RLOC_00019874
Chr2	stalkie_big_nohaplotig	exon	99126295	99127248	97	+	.	Parent=comp150860_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99126558	99126623	.	+	0	Parent=comp150860_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99167602	99172612	.	+	.	ID=FBgn0051344.1.mrna1;geneID=FBgn0051344.1.path1;Name=FBgn0051344.1;Dir=sensecoverage=100.0;identity=99.9;matches=950;mismatches=0;indels=1;unknowns=0;locus=RLOC_00019875
Chr2	stalkie_big_nohaplotig	exon	99167602	99167771	100	+	.	Parent=FBgn0051344.1.mrna1;Target=FBgn0051344.1 1 170 +
Chr2	stalkie_big_nohaplotig	exon	99171833	99172612	99	+	.	Parent=FBgn0051344.1.mrna1;Target=FBgn0051344.1 171 951 +
Chr2	stalkie_big_nohaplotig	CDS	99167602	99167771	.	+	0	Parent=FBgn0051344.1.mrna1;Target=FBgn0051344.1 1 170 +
Chr2	stalkie_big_nohaplotig	CDS	99171833	99172612	.	+	1	Parent=FBgn0051344.1.mrna1;Target=FBgn0051344.1 171 951 +
Chr2	stalkie_big_nohaplotig	mRNA	99265713	99294946	.	+	.	ID=comp158436_c1_seq1.mrna1;geneID=comp158436_c1_seq1.path1;Name=comp158436_c1_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=2466;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019875
Chr2	stalkie_big_nohaplotig	exon	99265713	99266795	100	+	.	Parent=comp158436_c1_seq1.mrna1;Target=comp158436_c1_seq1 1384 2466 -
Chr2	stalkie_big_nohaplotig	exon	99288513	99288876	100	+	.	Parent=comp158436_c1_seq1.mrna1;Target=comp158436_c1_seq1 1020 1383 -
Chr2	stalkie_big_nohaplotig	exon	99288961	99289162	100	+	.	Parent=comp158436_c1_seq1.mrna1;Target=comp158436_c1_seq1 818 1019 -
Chr2	stalkie_big_nohaplotig	exon	99292335	99292496	100	+	.	Parent=comp158436_c1_seq1.mrna1;Target=comp158436_c1_seq1 656 817 -
Chr2	stalkie_big_nohaplotig	exon	99293279	99293484	100	+	.	Parent=comp158436_c1_seq1.mrna1;Target=comp158436_c1_seq1 450 655 -
Chr2	stalkie_big_nohaplotig	exon	99293569	99293698	100	+	.	Parent=comp158436_c1_seq1.mrna1;Target=comp158436_c1_seq1 320 449 -
Chr2	stalkie_big_nohaplotig	exon	99294628	99294946	100	+	.	Parent=comp158436_c1_seq1.mrna1;Target=comp158436_c1_seq1 1 319 -
Chr2	stalkie_big_nohaplotig	CDS	99265714	99266795	.	+	0	Parent=comp158436_c1_seq1.mrna1;Target=comp158436_c1_seq1 1384 2465 .
Chr2	stalkie_big_nohaplotig	CDS	99288513	99288876	.	+	1	Parent=comp158436_c1_seq1.mrna1;Target=comp158436_c1_seq1 1020 1383 .
Chr2	stalkie_big_nohaplotig	CDS	99288961	99289162	.	+	0	Parent=comp158436_c1_seq1.mrna1;Target=comp158436_c1_seq1 818 1019 .
Chr2	stalkie_big_nohaplotig	CDS	99292335	99292496	.	+	2	Parent=comp158436_c1_seq1.mrna1;Target=comp158436_c1_seq1 656 817 .
Chr2	stalkie_big_nohaplotig	CDS	99293279	99293289	.	+	2	Parent=comp158436_c1_seq1.mrna1;Target=comp158436_c1_seq1 645 655 .
Chr2	stalkie_big_nohaplotig	mRNA	99265714	99294944	.	+	.	ID=FBgn0003507.1.mrna1;geneID=FBgn0003507.1.path1;Name=FBgn0003507.1;Dir=sensecoverage=100.0;identity=100.0;matches=2433;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019875
Chr2	stalkie_big_nohaplotig	exon	99265714	99266795	100	+	.	Parent=FBgn0003507.1.mrna1;Target=FBgn0003507.1 1 1082 +
Chr2	stalkie_big_nohaplotig	exon	99288513	99288876	100	+	.	Parent=FBgn0003507.1.mrna1;Target=FBgn0003507.1 1083 1446 +
Chr2	stalkie_big_nohaplotig	exon	99288961	99289162	100	+	.	Parent=FBgn0003507.1.mrna1;Target=FBgn0003507.1 1447 1648 +
Chr2	stalkie_big_nohaplotig	exon	99292335	99292507	100	+	.	Parent=FBgn0003507.1.mrna1;Target=FBgn0003507.1 1649 1821 +
Chr2	stalkie_big_nohaplotig	exon	99293320	99293484	100	+	.	Parent=FBgn0003507.1.mrna1;Target=FBgn0003507.1 1822 1986 +
Chr2	stalkie_big_nohaplotig	exon	99293569	99293698	100	+	.	Parent=FBgn0003507.1.mrna1;Target=FBgn0003507.1 1987 2116 +
Chr2	stalkie_big_nohaplotig	exon	99294628	99294944	100	+	.	Parent=FBgn0003507.1.mrna1;Target=FBgn0003507.1 2117 2433 +
Chr2	stalkie_big_nohaplotig	CDS	99265714	99266795	.	+	0	Parent=FBgn0003507.1.mrna1;Target=FBgn0003507.1 1 1082 +
Chr2	stalkie_big_nohaplotig	CDS	99288513	99288876	.	+	1	Parent=FBgn0003507.1.mrna1;Target=FBgn0003507.1 1083 1446 +
Chr2	stalkie_big_nohaplotig	CDS	99288961	99289162	.	+	0	Parent=FBgn0003507.1.mrna1;Target=FBgn0003507.1 1447 1648 +
Chr2	stalkie_big_nohaplotig	CDS	99292335	99292507	.	+	2	Parent=FBgn0003507.1.mrna1;Target=FBgn0003507.1 1649 1821 +
Chr2	stalkie_big_nohaplotig	CDS	99293320	99293484	.	+	0	Parent=FBgn0003507.1.mrna1;Target=FBgn0003507.1 1822 1986 +
Chr2	stalkie_big_nohaplotig	CDS	99293569	99293698	.	+	0	Parent=FBgn0003507.1.mrna1;Target=FBgn0003507.1 1987 2116 +
Chr2	stalkie_big_nohaplotig	CDS	99294628	99294944	.	+	2	Parent=FBgn0003507.1.mrna1;Target=FBgn0003507.1 2117 2433 +
Chr2	stalkie_big_nohaplotig	mRNA	99374596	99375030	.	+	.	ID=comp134912_c0_seq1.mrna1;geneID=comp134912_c0_seq1.path1;Name=comp134912_c0_seq1;Dir=indeterminatecoverage=80.4;identity=100.0;matches=435;mismatches=0;indels=0;unknowns=0;Target=comp134912_c0_seq1 435 1 .;CDS_Target=comp134912_c0_seq1 435 361 .;locus=RLOC_00019875
Chr2	stalkie_big_nohaplotig	exon	99374596	99375030	100	+	.	Parent=comp134912_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99374956	99375030	.	+	0	Parent=comp134912_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99569729	99570657	.	-	.	ID=comp134750_c0_seq1.mrna1;geneID=comp134750_c0_seq1.path1;Name=comp134750_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.9;matches=928;mismatches=1;indels=0;unknowns=0;Target=comp134750_c0_seq1 935 7 .;CDS_Target=comp134750_c0_seq1 11 9 .;locus=RLOC_00019875
Chr2	stalkie_big_nohaplotig	exon	99569729	99570657	99	-	.	Parent=comp134750_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99570653	99570655	.	-	0	Parent=comp134750_c0_seq1.mrna1
Chr2	gffcl	locus	99163663	99163949	.	+	.	ID=RLOC_00019876;geneIDs=comp137783_c0_seq1.path1;transcripts=comp137783_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99163663	99163949	.	+	.	ID=comp137783_c0_seq1.mrna1;geneID=comp137783_c0_seq1.path1;Name=comp137783_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=287;mismatches=0;indels=0;unknowns=0;Target=comp137783_c0_seq1 287 1 .;CDS_Target=comp137783_c0_seq1 285 223 .;locus=RLOC_00019876
Chr2	stalkie_big_nohaplotig	exon	99163663	99163949	100	+	.	Parent=comp137783_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99163885	99163947	.	+	0	Parent=comp137783_c0_seq1.mrna1
Chr2	gffcl	locus	99176038	99181096	.	-	.	ID=RLOC_00019877;geneIDs=FBgn0031834.1.path1;transcripts=FBgn0031834.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99176038	99181096	.	-	.	ID=FBgn0031834.1.mrna1;geneID=FBgn0031834.1.path1;Name=FBgn0031834.1;Dir=sensecoverage=100.0;identity=99.9;matches=1298;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019877
Chr2	stalkie_big_nohaplotig	exon	99176038	99176136	100	-	.	Parent=FBgn0031834.1.mrna1;Target=FBgn0031834.1 1201 1299 +
Chr2	stalkie_big_nohaplotig	exon	99179897	99181096	99	-	.	Parent=FBgn0031834.1.mrna1;Target=FBgn0031834.1 1 1200 +
Chr2	stalkie_big_nohaplotig	CDS	99176038	99176136	.	-	0	Parent=FBgn0031834.1.mrna1;Target=FBgn0031834.1 1201 1299 +
Chr2	stalkie_big_nohaplotig	CDS	99179897	99181096	.	-	0	Parent=FBgn0031834.1.mrna1;Target=FBgn0031834.1 1 1200 +
Chr2	gffcl	locus	99185898	99187172	.	-	.	ID=RLOC_00019878;geneIDs=FBgn0058160.1.path1;transcripts=FBgn0058160.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99185898	99187172	.	-	.	ID=FBgn0058160.1.mrna1;geneID=FBgn0058160.1.path1;Name=FBgn0058160.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1275;mismatches=0;indels=0;unknowns=0;Target=FBgn0058160.1 1275 1 .;locus=RLOC_00019878
Chr2	stalkie_big_nohaplotig	exon	99185898	99187172	100	-	.	Parent=FBgn0058160.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99185898	99187172	.	-	0	Parent=FBgn0058160.1.mrna1
Chr2	gffcl	locus	99194997	99196673	.	+	.	ID=RLOC_00019879;geneIDs=ORF537.path1;transcripts=ORF537.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99194997	99196673	.	+	.	ID=ORF537.mrna1;geneID=ORF537.path1;Name=ORF537;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1677;mismatches=0;indels=0;unknowns=0;Target=ORF537 1677 1 .;locus=RLOC_00019879
Chr2	stalkie_big_nohaplotig	exon	99194997	99196673	100	+	.	Parent=ORF537.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99194997	99196673	.	+	0	Parent=ORF537.mrna1
Chr2	gffcl	locus	99198921	99201557	.	+	.	ID=RLOC_00019880;geneIDs=FBgn0051155.1.path1;transcripts=FBgn0051155.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99198921	99201557	.	+	.	ID=FBgn0051155.1.mrna1;geneID=FBgn0051155.1.path1;Name=FBgn0051155.1;Dir=sensecoverage=100.0;identity=100.0;matches=531;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019880
Chr2	stalkie_big_nohaplotig	exon	99198921	99198944	100	+	.	Parent=FBgn0051155.1.mrna1;Target=FBgn0051155.1 1 24 +
Chr2	stalkie_big_nohaplotig	exon	99198997	99199266	100	+	.	Parent=FBgn0051155.1.mrna1;Target=FBgn0051155.1 25 294 +
Chr2	stalkie_big_nohaplotig	exon	99199325	99199375	100	+	.	Parent=FBgn0051155.1.mrna1;Target=FBgn0051155.1 295 345 +
Chr2	stalkie_big_nohaplotig	exon	99201302	99201439	100	+	.	Parent=FBgn0051155.1.mrna1;Target=FBgn0051155.1 346 483 +
Chr2	stalkie_big_nohaplotig	exon	99201510	99201557	100	+	.	Parent=FBgn0051155.1.mrna1;Target=FBgn0051155.1 484 531 +
Chr2	stalkie_big_nohaplotig	CDS	99198921	99198944	.	+	0	Parent=FBgn0051155.1.mrna1;Target=FBgn0051155.1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	99198997	99199266	.	+	0	Parent=FBgn0051155.1.mrna1;Target=FBgn0051155.1 25 294 +
Chr2	stalkie_big_nohaplotig	CDS	99199325	99199375	.	+	0	Parent=FBgn0051155.1.mrna1;Target=FBgn0051155.1 295 345 +
Chr2	stalkie_big_nohaplotig	CDS	99201302	99201439	.	+	0	Parent=FBgn0051155.1.mrna1;Target=FBgn0051155.1 346 483 +
Chr2	stalkie_big_nohaplotig	CDS	99201510	99201557	.	+	0	Parent=FBgn0051155.1.mrna1;Target=FBgn0051155.1 484 531 +
Chr2	gffcl	locus	99207041	99211820	.	+	.	ID=RLOC_00019882;geneIDs=FBgn0038303.1.path1;transcripts=FBgn0038303.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99207041	99211820	.	+	.	ID=FBgn0038303.1.mrna1;geneID=FBgn0038303.1.path1;Name=FBgn0038303.1;Dir=sensecoverage=100.0;identity=100.0;matches=3515;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019882
Chr2	stalkie_big_nohaplotig	exon	99207041	99207077	100	+	.	Parent=FBgn0038303.1.mrna1;Target=FBgn0038303.1 1 37 +
Chr2	stalkie_big_nohaplotig	exon	99207141	99207364	100	+	.	Parent=FBgn0038303.1.mrna1;Target=FBgn0038303.1 38 261 +
Chr2	stalkie_big_nohaplotig	exon	99207417	99207682	100	+	.	Parent=FBgn0038303.1.mrna1;Target=FBgn0038303.1 262 527 +
Chr2	stalkie_big_nohaplotig	exon	99207748	99209506	99	+	.	Parent=FBgn0038303.1.mrna1;Target=FBgn0038303.1 528 2286 +
Chr2	stalkie_big_nohaplotig	exon	99209573	99210229	100	+	.	Parent=FBgn0038303.1.mrna1;Target=FBgn0038303.1 2287 2943 +
Chr2	stalkie_big_nohaplotig	exon	99210299	99210644	100	+	.	Parent=FBgn0038303.1.mrna1;Target=FBgn0038303.1 2944 3289 +
Chr2	stalkie_big_nohaplotig	exon	99211594	99211820	100	+	.	Parent=FBgn0038303.1.mrna1;Target=FBgn0038303.1 3290 3516 +
Chr2	stalkie_big_nohaplotig	CDS	99207041	99207077	.	+	0	Parent=FBgn0038303.1.mrna1;Target=FBgn0038303.1 1 37 +
Chr2	stalkie_big_nohaplotig	CDS	99207141	99207364	.	+	2	Parent=FBgn0038303.1.mrna1;Target=FBgn0038303.1 38 261 +
Chr2	stalkie_big_nohaplotig	CDS	99207417	99207682	.	+	0	Parent=FBgn0038303.1.mrna1;Target=FBgn0038303.1 262 527 +
Chr2	stalkie_big_nohaplotig	CDS	99207748	99209506	.	+	1	Parent=FBgn0038303.1.mrna1;Target=FBgn0038303.1 528 2286 +
Chr2	stalkie_big_nohaplotig	CDS	99209573	99210229	.	+	0	Parent=FBgn0038303.1.mrna1;Target=FBgn0038303.1 2287 2943 +
Chr2	stalkie_big_nohaplotig	CDS	99210299	99210644	.	+	0	Parent=FBgn0038303.1.mrna1;Target=FBgn0038303.1 2944 3289 +
Chr2	stalkie_big_nohaplotig	CDS	99211594	99211820	.	+	2	Parent=FBgn0038303.1.mrna1;Target=FBgn0038303.1 3290 3516 +
Chr2	gffcl	locus	99212056	99219097	.	-	.	ID=RLOC_00019883;geneIDs=FBgn0038302.1.path1,FBgn0038302.2.path1;transcripts=FBgn0038302.1.mrna1,FBgn0038302.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99212056	99219097	.	-	.	ID=FBgn0038302.1.mrna1;geneID=FBgn0038302.1.path1;Name=FBgn0038302.1;Dir=sensecoverage=100.0;identity=100.0;matches=570;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019883
Chr2	stalkie_big_nohaplotig	exon	99212056	99212359	100	-	.	Parent=FBgn0038302.1.mrna1;Target=FBgn0038302.1 267 570 +
Chr2	stalkie_big_nohaplotig	exon	99213190	99213277	100	-	.	Parent=FBgn0038302.1.mrna1;Target=FBgn0038302.1 179 266 +
Chr2	stalkie_big_nohaplotig	exon	99214283	99214328	100	-	.	Parent=FBgn0038302.1.mrna1;Target=FBgn0038302.1 133 178 +
Chr2	stalkie_big_nohaplotig	exon	99218966	99219097	100	-	.	Parent=FBgn0038302.1.mrna1;Target=FBgn0038302.1 1 132 +
Chr2	stalkie_big_nohaplotig	CDS	99212056	99212359	.	-	1	Parent=FBgn0038302.1.mrna1;Target=FBgn0038302.1 267 570 +
Chr2	stalkie_big_nohaplotig	CDS	99213190	99213277	.	-	2	Parent=FBgn0038302.1.mrna1;Target=FBgn0038302.1 179 266 +
Chr2	stalkie_big_nohaplotig	CDS	99214283	99214328	.	-	0	Parent=FBgn0038302.1.mrna1;Target=FBgn0038302.1 133 178 +
Chr2	stalkie_big_nohaplotig	CDS	99218966	99219097	.	-	0	Parent=FBgn0038302.1.mrna1;Target=FBgn0038302.1 1 132 +
Chr2	stalkie_big_nohaplotig	mRNA	99216828	99219097	.	-	.	ID=FBgn0038302.2.mrna1;geneID=FBgn0038302.2.path1;Name=FBgn0038302.2;Dir=sensecoverage=100.0;identity=100.0;matches=582;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019883
Chr2	stalkie_big_nohaplotig	exon	99216828	99217134	100	-	.	Parent=FBgn0038302.2.mrna1;Target=FBgn0038302.2 276 582 +
Chr2	stalkie_big_nohaplotig	exon	99217196	99217286	100	-	.	Parent=FBgn0038302.2.mrna1;Target=FBgn0038302.2 185 275 +
Chr2	stalkie_big_nohaplotig	exon	99217354	99217405	100	-	.	Parent=FBgn0038302.2.mrna1;Target=FBgn0038302.2 133 184 +
Chr2	stalkie_big_nohaplotig	exon	99218966	99219097	100	-	.	Parent=FBgn0038302.2.mrna1;Target=FBgn0038302.2 1 132 +
Chr2	stalkie_big_nohaplotig	CDS	99216828	99217134	.	-	1	Parent=FBgn0038302.2.mrna1;Target=FBgn0038302.2 276 582 +
Chr2	stalkie_big_nohaplotig	CDS	99217196	99217286	.	-	2	Parent=FBgn0038302.2.mrna1;Target=FBgn0038302.2 185 275 +
Chr2	stalkie_big_nohaplotig	CDS	99217354	99217405	.	-	0	Parent=FBgn0038302.2.mrna1;Target=FBgn0038302.2 133 184 +
Chr2	stalkie_big_nohaplotig	CDS	99218966	99219097	.	-	0	Parent=FBgn0038302.2.mrna1;Target=FBgn0038302.2 1 132 +
Chr2	gffcl	locus	99225218	99367343	.	-	.	ID=RLOC_00019884;geneIDs=comp142614_c0_seq1.path1;transcripts=comp142614_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99225218	99367343	.	-	.	ID=comp142614_c0_seq1.mrna1;geneID=comp142614_c0_seq1.path1;Name=comp142614_c0_seq1;Dir=antisensecoverage=98.8;identity=100.0;matches=1547;mismatches=0;indels=0;unknowns=0;Target=comp142614_c0_seq1 1345 1437 .;locus=RLOC_00019884
Chr2	stalkie_big_nohaplotig	exon	99225218	99226200	100	-	.	Parent=comp142614_c0_seq1.mrna1;Target=comp142614_c0_seq1 1 983 -
Chr2	stalkie_big_nohaplotig	exon	99226272	99226446	100	-	.	Parent=comp142614_c0_seq1.mrna1;Target=comp142614_c0_seq1 984 1158 -
Chr2	stalkie_big_nohaplotig	exon	99242957	99243109	100	-	.	Parent=comp142614_c0_seq1.mrna1;Target=comp142614_c0_seq1 1159 1311 -
Chr2	stalkie_big_nohaplotig	exon	99365846	99365869	100	-	.	Parent=comp142614_c0_seq1.mrna1;Target=comp142614_c0_seq1 1312 1335 -
Chr2	stalkie_big_nohaplotig	exon	99367132	99367343	100	-	.	Parent=comp142614_c0_seq1.mrna1;Target=comp142614_c0_seq1 1336 1547 -
Chr2	stalkie_big_nohaplotig	CDS	99367141	99367233	.	-	0	Parent=comp142614_c0_seq1.mrna1
Chr2	gffcl	locus	99234150	99234765	.	-	.	ID=RLOC_00019885;geneIDs=comp144120_c0_seq1.path1;transcripts=comp144120_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99234150	99234765	.	-	.	ID=comp144120_c0_seq1.mrna1;geneID=comp144120_c0_seq1.path1;Name=comp144120_c0_seq1;Dir=indeterminatecoverage=97.6;identity=99.7;matches=614;mismatches=2;indels=0;unknowns=0;Target=comp144120_c0_seq1 616 1 .;CDS_Target=comp144120_c0_seq1 577 494 .;locus=RLOC_00019885
Chr2	stalkie_big_nohaplotig	exon	99234150	99234765	99	-	.	Parent=comp144120_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99234189	99234272	.	-	0	Parent=comp144120_c0_seq1.mrna1
Chr2	gffcl	locus	99247876	99248517	.	-	.	ID=RLOC_00019886;geneIDs=comp46274_c0_seq1.path1;transcripts=comp46274_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99247876	99248517	.	-	.	ID=comp46274_c0_seq1.mrna1;geneID=comp46274_c0_seq1.path1;Name=comp46274_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.8;matches=641;mismatches=1;indels=0;unknowns=0;Target=comp46274_c0_seq1 646 5 .;CDS_Target=comp46274_c0_seq1 78 7 .;locus=RLOC_00019886
Chr2	stalkie_big_nohaplotig	exon	99247876	99248517	99	-	.	Parent=comp46274_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99248444	99248515	.	-	0	Parent=comp46274_c0_seq1.mrna1
Chr2	gffcl	locus	99284693	99285181	.	+	.	ID=RLOC_00019887;geneIDs=comp81349_c0_seq1.path1;transcripts=comp81349_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99284693	99285181	.	+	.	ID=comp81349_c0_seq1.mrna1;geneID=comp81349_c0_seq1.path1;Name=comp81349_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=489;mismatches=0;indels=0;unknowns=0;Target=comp81349_c0_seq1 489 1 .;CDS_Target=comp81349_c0_seq1 328 251 .;locus=RLOC_00019887
Chr2	stalkie_big_nohaplotig	exon	99284693	99285181	100	+	.	Parent=comp81349_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99284943	99285020	.	+	0	Parent=comp81349_c0_seq1.mrna1
Chr2	gffcl	locus	99297122	99297569	.	+	.	ID=RLOC_00019888;geneIDs=comp992115_c0_seq1.path1;transcripts=comp992115_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99297122	99297569	.	+	.	ID=comp992115_c0_seq1.mrna1;geneID=comp992115_c0_seq1.path1;Name=comp992115_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.5;matches=440;mismatches=0;indels=16;unknowns=0;Target=comp992115_c0_seq1 448 1 .;CDS_Target=comp992115_c0_seq1 446 348 .;locus=RLOC_00019888
Chr2	stalkie_big_nohaplotig	exon	99297122	99297569	96	+	.	Parent=comp992115_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99297469	99297567	.	+	0	Parent=comp992115_c0_seq1.mrna1
Chr2	gffcl	locus	99301542	99302420	.	+	.	ID=RLOC_00019889;geneIDs=comp153697_c0_seq1.path1;transcripts=comp153697_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99301542	99302420	.	+	.	ID=comp153697_c0_seq1.mrna1;geneID=comp153697_c0_seq1.path1;Name=comp153697_c0_seq1;Dir=indeterminatecoverage=98.9;identity=98.7;matches=877;mismatches=2;indels=10;unknowns=0;Target=comp153697_c0_seq1 899 11 .;CDS_Target=comp153697_c0_seq1 865 737 .;locus=RLOC_00019889
Chr2	stalkie_big_nohaplotig	exon	99301542	99302420	98	+	.	Parent=comp153697_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99302258	99302386	.	+	0	Parent=comp153697_c0_seq1.mrna1
Chr2	gffcl	locus	99339135	99339572	.	+	.	ID=RLOC_00019890;geneIDs=comp103665_c0_seq1.path1;transcripts=comp103665_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99339135	99339572	.	+	.	ID=comp103665_c0_seq1.mrna1;geneID=comp103665_c0_seq1.path1;Name=comp103665_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=436;mismatches=2;indels=1;unknowns=0;Target=comp103665_c0_seq1 439 1 .;CDS_Target=comp103665_c0_seq1 24 1 .;locus=RLOC_00019890
Chr2	stalkie_big_nohaplotig	exon	99339135	99339572	99	+	.	Parent=comp103665_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99339135	99339158	.	+	0	Parent=comp103665_c0_seq1.mrna1
Chr2	gffcl	locus	99375661	99376668	.	-	.	ID=RLOC_00019892;geneIDs=ORF1741.path1;transcripts=ORF1741.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99375661	99376668	.	-	.	ID=ORF1741.mrna1;geneID=ORF1741.path1;Name=ORF1741;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1008;mismatches=0;indels=0;unknowns=0;Target=ORF1741 1008 1 .;locus=RLOC_00019892
Chr2	stalkie_big_nohaplotig	exon	99375661	99376668	100	-	.	Parent=ORF1741.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99375661	99376668	.	-	0	Parent=ORF1741.mrna1
Chr2	gffcl	locus	99433792	99435593	.	+	.	ID=RLOC_00019893;geneIDs=FBgn0003117.1.path1;transcripts=FBgn0003117.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99433792	99435593	.	+	.	ID=FBgn0003117.1.mrna1;geneID=FBgn0003117.1.path1;Name=FBgn0003117.1;Dir=sensecoverage=99.9;identity=100.0;matches=1609;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019893
Chr2	stalkie_big_nohaplotig	exon	99433792	99434401	100	+	.	Parent=FBgn0003117.1.mrna1;Target=FBgn0003117.1 3 612 +
Chr2	stalkie_big_nohaplotig	exon	99434494	99434725	100	+	.	Parent=FBgn0003117.1.mrna1;Target=FBgn0003117.1 613 844 +
Chr2	stalkie_big_nohaplotig	exon	99434827	99435593	100	+	.	Parent=FBgn0003117.1.mrna1;Target=FBgn0003117.1 845 1611 +
Chr2	stalkie_big_nohaplotig	CDS	99433793	99434401	.	+	0	Parent=FBgn0003117.1.mrna1;Target=FBgn0003117.1 4 612 +
Chr2	stalkie_big_nohaplotig	CDS	99434494	99434725	.	+	0	Parent=FBgn0003117.1.mrna1;Target=FBgn0003117.1 613 844 +
Chr2	stalkie_big_nohaplotig	CDS	99434827	99435593	.	+	2	Parent=FBgn0003117.1.mrna1;Target=FBgn0003117.1 845 1611 +
Chr2	gffcl	locus	99453803	99454996	.	+	.	ID=RLOC_00019894;geneIDs=ORF1779.path1;transcripts=ORF1779.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99453803	99454996	.	+	.	ID=ORF1779.mrna1;geneID=ORF1779.path1;Name=ORF1779;Dir=sensecoverage=100.0;identity=100.0;matches=999;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019894
Chr2	stalkie_big_nohaplotig	exon	99453803	99453885	100	+	.	Parent=ORF1779.mrna1;Target=ORF1779 1 83 +
Chr2	stalkie_big_nohaplotig	exon	99453944	99454832	100	+	.	Parent=ORF1779.mrna1;Target=ORF1779 84 972 +
Chr2	stalkie_big_nohaplotig	exon	99454970	99454996	100	+	.	Parent=ORF1779.mrna1;Target=ORF1779 973 999 +
Chr2	stalkie_big_nohaplotig	CDS	99453803	99453885	.	+	0	Parent=ORF1779.mrna1;Target=ORF1779 1 83 +
Chr2	stalkie_big_nohaplotig	CDS	99453944	99454832	.	+	1	Parent=ORF1779.mrna1;Target=ORF1779 84 972 +
Chr2	stalkie_big_nohaplotig	CDS	99454970	99454996	.	+	0	Parent=ORF1779.mrna1;Target=ORF1779 973 999 +
Chr2	gffcl	locus	99462623	99466321	.	+	.	ID=RLOC_00019895;geneIDs=FBgn0038394.1.path1;transcripts=FBgn0038394.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99462623	99466321	.	+	.	ID=FBgn0038394.1.mrna1;geneID=FBgn0038394.1.path1;Name=FBgn0038394.1;Dir=sensecoverage=100.0;identity=100.0;matches=810;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019895
Chr2	stalkie_big_nohaplotig	exon	99462623	99462764	100	+	.	Parent=FBgn0038394.1.mrna1;Target=FBgn0038394.1 1 142 +
Chr2	stalkie_big_nohaplotig	exon	99465496	99465736	100	+	.	Parent=FBgn0038394.1.mrna1;Target=FBgn0038394.1 143 383 +
Chr2	stalkie_big_nohaplotig	exon	99465812	99465998	100	+	.	Parent=FBgn0038394.1.mrna1;Target=FBgn0038394.1 384 570 +
Chr2	stalkie_big_nohaplotig	exon	99466082	99466321	100	+	.	Parent=FBgn0038394.1.mrna1;Target=FBgn0038394.1 571 810 +
Chr2	stalkie_big_nohaplotig	CDS	99462623	99462764	.	+	0	Parent=FBgn0038394.1.mrna1;Target=FBgn0038394.1 1 142 +
Chr2	stalkie_big_nohaplotig	CDS	99465496	99465736	.	+	2	Parent=FBgn0038394.1.mrna1;Target=FBgn0038394.1 143 383 +
Chr2	stalkie_big_nohaplotig	CDS	99465812	99465998	.	+	1	Parent=FBgn0038394.1.mrna1;Target=FBgn0038394.1 384 570 +
Chr2	stalkie_big_nohaplotig	CDS	99466082	99466321	.	+	0	Parent=FBgn0038394.1.mrna1;Target=FBgn0038394.1 571 810 +
Chr2	gffcl	locus	99467530	99468478	.	-	.	ID=RLOC_00019896;geneIDs=FBgn0038395.1.path1;transcripts=FBgn0038395.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99467530	99468478	.	-	.	ID=FBgn0038395.1.mrna1;geneID=FBgn0038395.1.path1;Name=FBgn0038395.1;Dir=sensecoverage=100.0;identity=99.9;matches=797;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019896
Chr2	stalkie_big_nohaplotig	exon	99467530	99467828	100	-	.	Parent=FBgn0038395.1.mrna1;Target=FBgn0038395.1 500 798 +
Chr2	stalkie_big_nohaplotig	exon	99467902	99468276	100	-	.	Parent=FBgn0038395.1.mrna1;Target=FBgn0038395.1 125 499 +
Chr2	stalkie_big_nohaplotig	exon	99468355	99468478	99	-	.	Parent=FBgn0038395.1.mrna1;Target=FBgn0038395.1 1 124 +
Chr2	stalkie_big_nohaplotig	CDS	99467530	99467828	.	-	2	Parent=FBgn0038395.1.mrna1;Target=FBgn0038395.1 500 798 +
Chr2	stalkie_big_nohaplotig	CDS	99467902	99468276	.	-	2	Parent=FBgn0038395.1.mrna1;Target=FBgn0038395.1 125 499 +
Chr2	stalkie_big_nohaplotig	CDS	99468355	99468478	.	-	0	Parent=FBgn0038395.1.mrna1;Target=FBgn0038395.1 1 124 +
Chr2	gffcl	locus	99469618	99487965	.	-	.	ID=RLOC_00019897;geneIDs=FBgn0024222.1.path1;transcripts=FBgn0024222.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99469618	99487965	.	-	.	ID=FBgn0024222.1.mrna1;geneID=FBgn0024222.1.path1;Name=FBgn0024222.1;Dir=sensecoverage=100.0;identity=100.0;matches=2280;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019897
Chr2	stalkie_big_nohaplotig	exon	99469618	99469669	100	-	.	Parent=FBgn0024222.1.mrna1;Target=FBgn0024222.1 2229 2280 +
Chr2	stalkie_big_nohaplotig	exon	99471733	99472149	100	-	.	Parent=FBgn0024222.1.mrna1;Target=FBgn0024222.1 1812 2228 +
Chr2	stalkie_big_nohaplotig	exon	99472206	99472393	100	-	.	Parent=FBgn0024222.1.mrna1;Target=FBgn0024222.1 1624 1811 +
Chr2	stalkie_big_nohaplotig	exon	99472464	99473513	100	-	.	Parent=FBgn0024222.1.mrna1;Target=FBgn0024222.1 574 1623 +
Chr2	stalkie_big_nohaplotig	exon	99474361	99474770	100	-	.	Parent=FBgn0024222.1.mrna1;Target=FBgn0024222.1 164 573 +
Chr2	stalkie_big_nohaplotig	exon	99487803	99487965	100	-	.	Parent=FBgn0024222.1.mrna1;Target=FBgn0024222.1 1 163 +
Chr2	stalkie_big_nohaplotig	CDS	99469618	99469669	.	-	1	Parent=FBgn0024222.1.mrna1;Target=FBgn0024222.1 2229 2280 +
Chr2	stalkie_big_nohaplotig	CDS	99471733	99472149	.	-	1	Parent=FBgn0024222.1.mrna1;Target=FBgn0024222.1 1812 2228 +
Chr2	stalkie_big_nohaplotig	CDS	99472206	99472393	.	-	0	Parent=FBgn0024222.1.mrna1;Target=FBgn0024222.1 1624 1811 +
Chr2	stalkie_big_nohaplotig	CDS	99472464	99473513	.	-	0	Parent=FBgn0024222.1.mrna1;Target=FBgn0024222.1 574 1623 +
Chr2	stalkie_big_nohaplotig	CDS	99474361	99474770	.	-	2	Parent=FBgn0024222.1.mrna1;Target=FBgn0024222.1 164 573 +
Chr2	stalkie_big_nohaplotig	CDS	99487803	99487965	.	-	0	Parent=FBgn0024222.1.mrna1;Target=FBgn0024222.1 1 163 +
Chr2	gffcl	locus	99490120	99491282	.	-	.	ID=RLOC_00019898;geneIDs=comp115338_c0_seq1.path1;transcripts=comp115338_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99490120	99491282	.	-	.	ID=comp115338_c0_seq1.mrna1;geneID=comp115338_c0_seq1.path1;Name=comp115338_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=1163;mismatches=0;indels=0;unknowns=0;Target=comp115338_c0_seq1 1163 1 .;CDS_Target=comp115338_c0_seq1 708 550 .;locus=RLOC_00019898
Chr2	stalkie_big_nohaplotig	exon	99490120	99491282	100	-	.	Parent=comp115338_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99490575	99490733	.	-	0	Parent=comp115338_c0_seq1.mrna1
Chr2	gffcl	locus	99491549	99498571	.	.	.	ID=RLOC_00019899;geneIDs=FBgn0037288.1.path1,comp149419_c0_seq1.path1;transcripts=FBgn0037288.1.mrna1,comp149419_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99491549	99498571	.	-	.	ID=FBgn0037288.1.mrna1;geneID=FBgn0037288.1.path1;Name=FBgn0037288.1;Dir=sensecoverage=100.0;identity=100.0;matches=774;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019899
Chr2	stalkie_big_nohaplotig	exon	99491549	99491847	100	-	.	Parent=FBgn0037288.1.mrna1;Target=FBgn0037288.1 476 774 +
Chr2	stalkie_big_nohaplotig	exon	99491907	99492040	100	-	.	Parent=FBgn0037288.1.mrna1;Target=FBgn0037288.1 342 475 +
Chr2	stalkie_big_nohaplotig	exon	99493318	99493555	100	-	.	Parent=FBgn0037288.1.mrna1;Target=FBgn0037288.1 104 341 +
Chr2	stalkie_big_nohaplotig	exon	99493628	99493718	100	-	.	Parent=FBgn0037288.1.mrna1;Target=FBgn0037288.1 13 103 +
Chr2	stalkie_big_nohaplotig	exon	99498560	99498571	100	-	.	Parent=FBgn0037288.1.mrna1;Target=FBgn0037288.1 1 12 +
Chr2	stalkie_big_nohaplotig	CDS	99491549	99491847	.	-	2	Parent=FBgn0037288.1.mrna1;Target=FBgn0037288.1 476 774 +
Chr2	stalkie_big_nohaplotig	CDS	99491907	99492040	.	-	1	Parent=FBgn0037288.1.mrna1;Target=FBgn0037288.1 342 475 +
Chr2	stalkie_big_nohaplotig	CDS	99493318	99493555	.	-	2	Parent=FBgn0037288.1.mrna1;Target=FBgn0037288.1 104 341 +
Chr2	stalkie_big_nohaplotig	CDS	99493628	99493718	.	-	0	Parent=FBgn0037288.1.mrna1;Target=FBgn0037288.1 13 103 +
Chr2	stalkie_big_nohaplotig	CDS	99498560	99498571	.	-	0	Parent=FBgn0037288.1.mrna1;Target=FBgn0037288.1 1 12 +
Chr2	stalkie_big_nohaplotig	mRNA	99493695	99495490	.	+	.	ID=comp149419_c0_seq1.mrna1;geneID=comp149419_c0_seq1.path1;Name=comp149419_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1796;mismatches=0;indels=0;unknowns=0;Target=comp149419_c0_seq1 1796 1 .;CDS_Target=comp149419_c0_seq1 146 3 .;locus=RLOC_00019899
Chr2	stalkie_big_nohaplotig	exon	99493695	99495490	100	+	.	Parent=comp149419_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99493697	99493840	.	+	0	Parent=comp149419_c0_seq1.mrna1
Chr2	gffcl	locus	99496165	99496765	.	-	.	ID=RLOC_00019900;geneIDs=comp63114_c0_seq1.path1;transcripts=comp63114_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99496165	99496765	.	-	.	ID=comp63114_c0_seq1.mrna1;geneID=comp63114_c0_seq1.path1;Name=comp63114_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=601;mismatches=0;indels=0;unknowns=0;Target=comp63114_c0_seq1 601 1 .;CDS_Target=comp63114_c0_seq1 320 171 .;locus=RLOC_00019900
Chr2	stalkie_big_nohaplotig	exon	99496165	99496765	100	-	.	Parent=comp63114_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99496446	99496595	.	-	0	Parent=comp63114_c0_seq1.mrna1
Chr2	gffcl	locus	99506923	99507159	.	-	.	ID=RLOC_00019901;geneIDs=comp69555_c0_seq1.path1;transcripts=comp69555_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99506923	99507159	.	-	.	ID=comp69555_c0_seq1.mrna1;geneID=comp69555_c0_seq1.path1;Name=comp69555_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=237;mismatches=0;indels=1;unknowns=0;Target=comp69555_c0_seq1 238 1 .;CDS_Target=comp69555_c0_seq1 212 138 .;locus=RLOC_00019901
Chr2	stalkie_big_nohaplotig	exon	99506923	99507159	99	-	.	Parent=comp69555_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99506949	99507023	.	-	0	Parent=comp69555_c0_seq1.mrna1
Chr2	gffcl	locus	99507670	99519763	.	-	.	ID=RLOC_00019902;geneIDs=FBgn0250839.1.path1;transcripts=FBgn0250839.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99507670	99519763	.	-	.	ID=FBgn0250839.1.mrna1;geneID=FBgn0250839.1.path1;Name=FBgn0250839.1;Dir=sensecoverage=99.5;identity=100.0;matches=752;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019902
Chr2	stalkie_big_nohaplotig	exon	99507670	99507821	100	-	.	Parent=FBgn0250839.1.mrna1;Target=FBgn0250839.1 605 756 +
Chr2	stalkie_big_nohaplotig	exon	99509441	99509593	100	-	.	Parent=FBgn0250839.1.mrna1;Target=FBgn0250839.1 452 604 +
Chr2	stalkie_big_nohaplotig	exon	99509763	99509896	100	-	.	Parent=FBgn0250839.1.mrna1;Target=FBgn0250839.1 318 451 +
Chr2	stalkie_big_nohaplotig	exon	99512908	99513029	100	-	.	Parent=FBgn0250839.1.mrna1;Target=FBgn0250839.1 196 317 +
Chr2	stalkie_big_nohaplotig	exon	99513092	99513210	100	-	.	Parent=FBgn0250839.1.mrna1;Target=FBgn0250839.1 77 195 +
Chr2	stalkie_big_nohaplotig	exon	99519692	99519763	100	-	.	Parent=FBgn0250839.1.mrna1;Target=FBgn0250839.1 5 76 +
Chr2	stalkie_big_nohaplotig	CDS	99507670	99507821	.	-	2	Parent=FBgn0250839.1.mrna1;Target=FBgn0250839.1 605 756 +
Chr2	stalkie_big_nohaplotig	CDS	99509441	99509593	.	-	2	Parent=FBgn0250839.1.mrna1;Target=FBgn0250839.1 452 604 +
Chr2	stalkie_big_nohaplotig	CDS	99509763	99509896	.	-	1	Parent=FBgn0250839.1.mrna1;Target=FBgn0250839.1 318 451 +
Chr2	stalkie_big_nohaplotig	CDS	99512908	99513029	.	-	0	Parent=FBgn0250839.1.mrna1;Target=FBgn0250839.1 196 317 +
Chr2	stalkie_big_nohaplotig	CDS	99513092	99513210	.	-	2	Parent=FBgn0250839.1.mrna1;Target=FBgn0250839.1 77 195 +
Chr2	stalkie_big_nohaplotig	CDS	99519692	99519761	.	-	0	Parent=FBgn0250839.1.mrna1;Target=FBgn0250839.1 7 76 +
Chr2	gffcl	locus	99510165	99511413	.	-	.	ID=RLOC_00019903;geneIDs=comp153537_c0_seq1.path1;transcripts=comp153537_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99510165	99511413	.	-	.	ID=comp153537_c0_seq1.mrna1;geneID=comp153537_c0_seq1.path1;Name=comp153537_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1243;mismatches=6;indels=4;unknowns=0;Target=comp153537_c0_seq1 1253 1 .;CDS_Target=comp153537_c0_seq1 566 393 .;locus=RLOC_00019903
Chr2	stalkie_big_nohaplotig	exon	99510165	99511413	99	-	.	Parent=comp153537_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99510848	99511021	.	-	0	Parent=comp153537_c0_seq1.mrna1
Chr2	gffcl	locus	99519934	99520145	.	-	.	ID=RLOC_00019904;geneIDs=comp112799_c0_seq1.path1;transcripts=comp112799_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99519934	99520145	.	-	.	ID=comp112799_c0_seq1.mrna1;geneID=comp112799_c0_seq1.path1;Name=comp112799_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=212;mismatches=0;indels=0;unknowns=0;Target=comp112799_c0_seq1 212 1 .;CDS_Target=comp112799_c0_seq1 83 3 .;locus=RLOC_00019904
Chr2	stalkie_big_nohaplotig	exon	99519934	99520145	100	-	.	Parent=comp112799_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99520063	99520143	.	-	0	Parent=comp112799_c0_seq1.mrna1
Chr2	gffcl	locus	99537594	99537827	.	+	.	ID=RLOC_00019905;geneIDs=comp48621_c0_seq1.path1;transcripts=comp48621_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99537594	99537827	.	+	.	ID=comp48621_c0_seq1.mrna1;geneID=comp48621_c0_seq1.path1;Name=comp48621_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=234;mismatches=0;indels=0;unknowns=0;Target=comp48621_c0_seq1 234 1 .;CDS_Target=comp48621_c0_seq1 64 2 .;locus=RLOC_00019905
Chr2	stalkie_big_nohaplotig	exon	99537594	99537827	100	+	.	Parent=comp48621_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99537595	99537657	.	+	0	Parent=comp48621_c0_seq1.mrna1
Chr2	gffcl	locus	99537835	99554790	.	+	.	ID=RLOC_00019906;geneIDs=FBgn0037290.1.path1;transcripts=FBgn0037290.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99537835	99554790	.	+	.	ID=FBgn0037290.1.mrna1;geneID=FBgn0037290.1.path1;Name=FBgn0037290.1;Dir=sensecoverage=100.0;identity=100.0;matches=768;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019906
Chr2	stalkie_big_nohaplotig	exon	99537835	99537928	100	+	.	Parent=FBgn0037290.1.mrna1;Target=FBgn0037290.1 1 94 +
Chr2	stalkie_big_nohaplotig	exon	99546741	99546850	100	+	.	Parent=FBgn0037290.1.mrna1;Target=FBgn0037290.1 95 204 +
Chr2	stalkie_big_nohaplotig	exon	99554104	99554368	100	+	.	Parent=FBgn0037290.1.mrna1;Target=FBgn0037290.1 205 469 +
Chr2	stalkie_big_nohaplotig	exon	99554430	99554579	100	+	.	Parent=FBgn0037290.1.mrna1;Target=FBgn0037290.1 470 619 +
Chr2	stalkie_big_nohaplotig	exon	99554642	99554790	100	+	.	Parent=FBgn0037290.1.mrna1;Target=FBgn0037290.1 620 768 +
Chr2	stalkie_big_nohaplotig	CDS	99537835	99537928	.	+	0	Parent=FBgn0037290.1.mrna1;Target=FBgn0037290.1 1 94 +
Chr2	stalkie_big_nohaplotig	CDS	99546741	99546850	.	+	2	Parent=FBgn0037290.1.mrna1;Target=FBgn0037290.1 95 204 +
Chr2	stalkie_big_nohaplotig	CDS	99554104	99554368	.	+	0	Parent=FBgn0037290.1.mrna1;Target=FBgn0037290.1 205 469 +
Chr2	stalkie_big_nohaplotig	CDS	99554430	99554579	.	+	2	Parent=FBgn0037290.1.mrna1;Target=FBgn0037290.1 470 619 +
Chr2	stalkie_big_nohaplotig	CDS	99554642	99554790	.	+	2	Parent=FBgn0037290.1.mrna1;Target=FBgn0037290.1 620 768 +
Chr2	gffcl	locus	99556800	99557324	.	-	.	ID=RLOC_00019907;geneIDs=comp145227_c0_seq1.path1;transcripts=comp145227_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99556800	99557324	.	-	.	ID=comp145227_c0_seq1.mrna1;geneID=comp145227_c0_seq1.path1;Name=comp145227_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=525;mismatches=0;indels=0;unknowns=0;Target=comp145227_c0_seq1 525 1 .;CDS_Target=comp145227_c0_seq1 261 145 .;locus=RLOC_00019907
Chr2	stalkie_big_nohaplotig	exon	99556800	99557324	100	-	.	Parent=comp145227_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99557064	99557180	.	-	0	Parent=comp145227_c0_seq1.mrna1
Chr2	gffcl	locus	99557959	99558996	.	-	.	ID=RLOC_00019908;geneIDs=comp153038_c0_seq1.path1;transcripts=comp153038_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99557959	99558996	.	-	.	ID=comp153038_c0_seq1.mrna1;geneID=comp153038_c0_seq1.path1;Name=comp153038_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1038;mismatches=0;indels=0;unknowns=0;Target=comp153038_c0_seq1 1038 1 .;CDS_Target=comp153038_c0_seq1 277 146 .;locus=RLOC_00019908
Chr2	stalkie_big_nohaplotig	exon	99557959	99558996	100	-	.	Parent=comp153038_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99558720	99558851	.	-	0	Parent=comp153038_c0_seq1.mrna1
Chr2	gffcl	locus	99559414	99559917	.	.	.	ID=RLOC_00019909;geneIDs=comp155072_c0_seq1.path1,comp155072_c0_seq1.path2;transcripts=comp155072_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	99559414	99559917	.	+	.	ID=comp155072_c0_seq1.mrna2;geneID=comp155072_c0_seq1.path2;Name=comp155072_c0_seq1;Dir=indeterminatecoverage=64.7;identity=100.0;matches=504;mismatches=0;indels=0;unknowns=0;Target=comp155072_c0_seq1 779 276 .;locus=RLOC_00019909
Chr2	stalkie_big_nohaplotig	exon	99559414	99559917	100	+	.	Parent=comp155072_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	99559438	99559581	.	+	0	Parent=comp155072_c0_seq1.mrna2
Chr2	gffcl	locus	99562825	99563841	.	+	.	ID=RLOC_00019910;geneIDs=comp152506_c0_seq1.path1;transcripts=comp152506_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99562825	99563841	.	+	.	ID=comp152506_c0_seq1.mrna1;geneID=comp152506_c0_seq1.path1;Name=comp152506_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1006;mismatches=11;indels=1;unknowns=0;Target=comp152506_c0_seq1 1018 1 .;CDS_Target=comp152506_c0_seq1 743 615 .;locus=RLOC_00019910
Chr2	stalkie_big_nohaplotig	exon	99562825	99563841	98	+	.	Parent=comp152506_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99563438	99563566	.	+	0	Parent=comp152506_c0_seq1.mrna1
Chr2	gffcl	locus	99564583	99566181	.	-	.	ID=RLOC_00019911;geneIDs=comp152918_c0_seq1.path1;transcripts=comp152918_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99564583	99566181	.	-	.	ID=comp152918_c0_seq1.mrna1;geneID=comp152918_c0_seq1.path1;Name=comp152918_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1597;mismatches=2;indels=1;unknowns=0;Target=comp152918_c0_seq1 1600 1 .;CDS_Target=comp152918_c0_seq1 903 763 .;locus=RLOC_00019911
Chr2	stalkie_big_nohaplotig	exon	99564583	99566181	99	-	.	Parent=comp152918_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99565280	99565420	.	-	0	Parent=comp152918_c0_seq1.mrna1
Chr2	gffcl	locus	99568535	99569567	.	+	.	ID=RLOC_00019912;geneIDs=comp145221_c4_seq1.path1;transcripts=comp145221_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99568535	99569567	.	+	.	ID=comp145221_c4_seq1.mrna1;geneID=comp145221_c4_seq1.path1;Name=comp145221_c4_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1033;mismatches=0;indels=0;unknowns=0;Target=comp145221_c4_seq1 1033 1 .;CDS_Target=comp145221_c4_seq1 999 835 .;locus=RLOC_00019912
Chr2	stalkie_big_nohaplotig	exon	99568535	99569567	100	+	.	Parent=comp145221_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99569369	99569533	.	+	0	Parent=comp145221_c4_seq1.mrna1
Chr2	gffcl	locus	99780180	99781384	.	+	.	ID=RLOC_00019914;geneIDs=comp153130_c0_seq1.path1;transcripts=comp153130_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99780180	99781384	.	+	.	ID=comp153130_c0_seq1.mrna1;geneID=comp153130_c0_seq1.path1;Name=comp153130_c0_seq1;Dir=indeterminatecoverage=94.0;identity=99.9;matches=1205;mismatches=0;indels=1;unknowns=0;Target=comp153130_c0_seq1 1206 1 .;CDS_Target=comp153130_c0_seq1 974 774 .;locus=RLOC_00019914
Chr2	stalkie_big_nohaplotig	exon	99780180	99781384	99	+	.	Parent=comp153130_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99780952	99781152	.	+	0	Parent=comp153130_c0_seq1.mrna1
Chr2	gffcl	locus	99791590	99792398	.	-	.	ID=RLOC_00019915;geneIDs=comp86189_c0_seq1.path1;transcripts=comp86189_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99791590	99792398	.	-	.	ID=comp86189_c0_seq1.mrna1;geneID=comp86189_c0_seq1.path1;Name=comp86189_c0_seq1;Dir=indeterminatecoverage=99.1;identity=97.4;matches=788;mismatches=3;indels=18;unknowns=0;Target=comp86189_c0_seq1 791 1 .;CDS_Target=comp86189_c0_seq1 611 228 .;locus=RLOC_00019915
Chr2	stalkie_big_nohaplotig	exon	99791590	99792398	97	-	.	Parent=comp86189_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99791770	99792171	.	-	0	Parent=comp86189_c0_seq1.mrna1
Chr2	gffcl	locus	99792773	99793333	.	+	.	ID=RLOC_00019916;geneIDs=comp134809_c0_seq1.path1;transcripts=comp134809_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99792773	99793333	.	+	.	ID=comp134809_c0_seq1.mrna1;geneID=comp134809_c0_seq1.path1;Name=comp134809_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=561;mismatches=0;indels=0;unknowns=0;Target=comp134809_c0_seq1 561 1 .;CDS_Target=comp134809_c0_seq1 275 129 .;locus=RLOC_00019916
Chr2	stalkie_big_nohaplotig	exon	99792773	99793333	100	+	.	Parent=comp134809_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99792901	99793047	.	+	0	Parent=comp134809_c0_seq1.mrna1
Chr2	gffcl	locus	99794775	99795097	.	-	.	ID=RLOC_00019917;geneIDs=comp89263_c0_seq1.path1;transcripts=comp89263_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99794775	99795097	.	-	.	ID=comp89263_c0_seq1.mrna1;geneID=comp89263_c0_seq1.path1;Name=comp89263_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=323;mismatches=0;indels=0;unknowns=0;Target=comp89263_c0_seq1 323 1 .;CDS_Target=comp89263_c0_seq1 100 2 .;locus=RLOC_00019917
Chr2	stalkie_big_nohaplotig	exon	99794775	99795097	100	-	.	Parent=comp89263_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99794998	99795096	.	-	0	Parent=comp89263_c0_seq1.mrna1
Chr2	gffcl	locus	99795515	99796155	.	+	.	ID=RLOC_00019918;geneIDs=comp1110626_c0_seq1.path1;transcripts=comp1110626_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99795515	99796155	.	+	.	ID=comp1110626_c0_seq1.mrna1;geneID=comp1110626_c0_seq1.path1;Name=comp1110626_c0_seq1;Dir=indeterminatecoverage=97.9;identity=100.0;matches=641;mismatches=0;indels=0;unknowns=0;Target=comp1110626_c0_seq1 654 14 .;CDS_Target=comp1110626_c0_seq1 626 546 .;locus=RLOC_00019918
Chr2	stalkie_big_nohaplotig	exon	99795515	99796155	100	+	.	Parent=comp1110626_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99796047	99796127	.	+	0	Parent=comp1110626_c0_seq1.mrna1
Chr2	gffcl	locus	99796317	99796889	.	-	.	ID=RLOC_00019919;geneIDs=comp74171_c0_seq1.path1;transcripts=comp74171_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99796317	99796889	.	-	.	ID=comp74171_c0_seq1.mrna1;geneID=comp74171_c0_seq1.path1;Name=comp74171_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=573;mismatches=0;indels=0;unknowns=0;Target=comp74171_c0_seq1 573 1 .;CDS_Target=comp74171_c0_seq1 118 2 .;locus=RLOC_00019919
Chr2	stalkie_big_nohaplotig	exon	99796317	99796889	100	-	.	Parent=comp74171_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99796772	99796888	.	-	0	Parent=comp74171_c0_seq1.mrna1
Chr2	gffcl	locus	99798165	99798856	.	-	.	ID=RLOC_00019920;geneIDs=comp1240225_c0_seq1.path1;transcripts=comp1240225_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99798165	99798856	.	-	.	ID=comp1240225_c0_seq1.mrna1;geneID=comp1240225_c0_seq1.path1;Name=comp1240225_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=692;mismatches=0;indels=0;unknowns=0;Target=comp1240225_c0_seq1 692 1 .;CDS_Target=comp1240225_c0_seq1 314 153 .;locus=RLOC_00019920
Chr2	stalkie_big_nohaplotig	exon	99798165	99798856	100	-	.	Parent=comp1240225_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99798543	99798704	.	-	0	Parent=comp1240225_c0_seq1.mrna1
Chr2	gffcl	locus	99799717	99801292	.	.	.	ID=RLOC_00019921;geneIDs=comp85471_c0_seq1.path1,comp98675_c0_seq1.path1;transcripts=comp85471_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99800414	99801292	.	-	.	ID=comp85471_c0_seq1.mrna1;geneID=comp85471_c0_seq1.path1;Name=comp85471_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=879;mismatches=0;indels=0;unknowns=0;Target=comp85471_c0_seq1 879 1 .;CDS_Target=comp85471_c0_seq1 873 700 .;locus=RLOC_00019921
Chr2	stalkie_big_nohaplotig	exon	99800414	99801292	100	-	.	Parent=comp85471_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99800420	99800593	.	-	0	Parent=comp85471_c0_seq1.mrna1
Chr2	gffcl	locus	99802690	99803227	.	-	.	ID=RLOC_00019922;geneIDs=comp149849_c0_seq1.path2;transcripts=comp149849_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	99802690	99803227	.	-	.	ID=comp149849_c0_seq1.mrna2;geneID=comp149849_c0_seq1.path2;Name=comp149849_c0_seq1;Dir=indeterminatecoverage=62.7;identity=99.4;matches=536;mismatches=2;indels=1;unknowns=0;Target=comp149849_c0_seq1 860 322 .;CDS_Target=comp149849_c0_seq1 606 493 .;locus=RLOC_00019922
Chr2	stalkie_big_nohaplotig	exon	99802690	99803227	99	-	.	Parent=comp149849_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	99802943	99803056	.	-	0	Parent=comp149849_c0_seq1.mrna2
Chr2	gffcl	locus	99806074	99806442	.	-	.	ID=RLOC_00019923;geneIDs=comp67224_c0_seq1.path1;transcripts=comp67224_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99806074	99806442	.	-	.	ID=comp67224_c0_seq1.mrna1;geneID=comp67224_c0_seq1.path1;Name=comp67224_c0_seq1;Dir=indeterminatecoverage=94.1;identity=100.0;matches=369;mismatches=0;indels=0;unknowns=0;Target=comp67224_c0_seq1 392 24 .;CDS_Target=comp67224_c0_seq1 328 239 .;locus=RLOC_00019923
Chr2	stalkie_big_nohaplotig	exon	99806074	99806442	100	-	.	Parent=comp67224_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99806138	99806227	.	-	0	Parent=comp67224_c0_seq1.mrna1
Chr2	gffcl	locus	99806656	99807199	.	-	.	ID=RLOC_00019924;geneIDs=comp72648_c0_seq1.path1;transcripts=comp72648_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99806656	99807199	.	-	.	ID=comp72648_c0_seq1.mrna1;geneID=comp72648_c0_seq1.path1;Name=comp72648_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=544;mismatches=0;indels=0;unknowns=0;Target=comp72648_c0_seq1 544 1 .;CDS_Target=comp72648_c0_seq1 301 155 .;locus=RLOC_00019924
Chr2	stalkie_big_nohaplotig	exon	99806656	99807199	100	-	.	Parent=comp72648_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99806899	99807045	.	-	0	Parent=comp72648_c0_seq1.mrna1
Chr2	gffcl	locus	99807240	99808712	.	-	.	ID=RLOC_00019925;geneIDs=comp102075_c0_seq1.path1;transcripts=comp102075_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99807240	99808712	.	-	.	ID=comp102075_c0_seq1.mrna1;geneID=comp102075_c0_seq1.path1;Name=comp102075_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1471;mismatches=2;indels=0;unknowns=0;Target=comp102075_c0_seq1 1473 1 .;CDS_Target=comp102075_c0_seq1 750 574 .;locus=RLOC_00019925
Chr2	stalkie_big_nohaplotig	exon	99807240	99808712	99	-	.	Parent=comp102075_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99807963	99808139	.	-	0	Parent=comp102075_c0_seq1.mrna1
Chr2	gffcl	locus	99808922	99809676	.	+	.	ID=RLOC_00019926;geneIDs=comp118756_c1_seq1.path1;transcripts=comp118756_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99808922	99809676	.	+	.	ID=comp118756_c1_seq1.mrna1;geneID=comp118756_c1_seq1.path1;Name=comp118756_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=755;mismatches=0;indels=0;unknowns=0;Target=comp118756_c1_seq1 755 1 .;CDS_Target=comp118756_c1_seq1 147 1 .;locus=RLOC_00019926
Chr2	stalkie_big_nohaplotig	exon	99808922	99809676	100	+	.	Parent=comp118756_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99808922	99809068	.	+	0	Parent=comp118756_c1_seq1.mrna1
Chr2	gffcl	locus	99811815	99812389	.	+	.	ID=RLOC_00019927;geneIDs=comp146722_c0_seq1.path1;transcripts=comp146722_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99811815	99812389	.	+	.	ID=comp146722_c0_seq1.mrna1;geneID=comp146722_c0_seq1.path1;Name=comp146722_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=575;mismatches=0;indels=0;unknowns=0;Target=comp146722_c0_seq1 575 1 .;CDS_Target=comp146722_c0_seq1 525 199 .;locus=RLOC_00019927
Chr2	stalkie_big_nohaplotig	exon	99811815	99812389	100	+	.	Parent=comp146722_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99812013	99812339	.	+	0	Parent=comp146722_c0_seq1.mrna1
Chr2	gffcl	locus	99812494	99813284	.	+	.	ID=RLOC_00019928;geneIDs=comp73371_c0_seq1.path1;transcripts=comp73371_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99812494	99813284	.	+	.	ID=comp73371_c0_seq1.mrna1;geneID=comp73371_c0_seq1.path1;Name=comp73371_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=790;mismatches=1;indels=0;unknowns=0;Target=comp73371_c0_seq1 791 1 .;CDS_Target=comp73371_c0_seq1 256 62 .;locus=RLOC_00019928
Chr2	stalkie_big_nohaplotig	exon	99812494	99813284	99	+	.	Parent=comp73371_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99812555	99812749	.	+	0	Parent=comp73371_c0_seq1.mrna1
Chr2	gffcl	locus	99814090	99814643	.	+	.	ID=RLOC_00019929;geneIDs=comp67706_c0_seq1.path1;transcripts=comp67706_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99814090	99814643	.	+	.	ID=comp67706_c0_seq1.mrna1;geneID=comp67706_c0_seq1.path1;Name=comp67706_c0_seq1;Dir=indeterminatecoverage=84.3;identity=100.0;matches=554;mismatches=0;indels=0;unknowns=0;Target=comp67706_c0_seq1 555 2 .;CDS_Target=comp67706_c0_seq1 386 273 .;locus=RLOC_00019929
Chr2	stalkie_big_nohaplotig	exon	99814090	99814643	100	+	.	Parent=comp67706_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99814361	99814474	.	+	0	Parent=comp67706_c0_seq1.mrna1
Chr2	gffcl	locus	99815195	99815630	.	-	.	ID=RLOC_00019930;geneIDs=comp1139553_c0_seq1.path1;transcripts=comp1139553_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99815195	99815630	.	-	.	ID=comp1139553_c0_seq1.mrna1;geneID=comp1139553_c0_seq1.path1;Name=comp1139553_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=436;mismatches=0;indels=0;unknowns=0;Target=comp1139553_c0_seq1 436 1 .;CDS_Target=comp1139553_c0_seq1 267 160 .;locus=RLOC_00019930
Chr2	stalkie_big_nohaplotig	exon	99815195	99815630	100	-	.	Parent=comp1139553_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99815364	99815471	.	-	0	Parent=comp1139553_c0_seq1.mrna1
Chr2	gffcl	locus	99817334	99818045	.	-	.	ID=RLOC_00019931;geneIDs=comp139964_c0_seq1.path1;transcripts=comp139964_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99817334	99818045	.	-	.	ID=comp139964_c0_seq1.mrna1;geneID=comp139964_c0_seq1.path1;Name=comp139964_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=711;mismatches=1;indels=0;unknowns=0;Target=comp139964_c0_seq1 712 1 .;CDS_Target=comp139964_c0_seq1 706 623 .;locus=RLOC_00019931
Chr2	stalkie_big_nohaplotig	exon	99817334	99818045	99	-	.	Parent=comp139964_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99817340	99817423	.	-	0	Parent=comp139964_c0_seq1.mrna1
Chr2	gffcl	locus	99818140	99819369	.	-	.	ID=RLOC_00019932;geneIDs=comp147008_c0_seq1.path1;transcripts=comp147008_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99818140	99819369	.	-	.	ID=comp147008_c0_seq1.mrna1;geneID=comp147008_c0_seq1.path1;Name=comp147008_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1229;mismatches=1;indels=1;unknowns=0;Target=comp147008_c0_seq1 1231 1 .;CDS_Target=comp147008_c0_seq1 1012 914 .;locus=RLOC_00019932
Chr2	stalkie_big_nohaplotig	exon	99818140	99819369	99	-	.	Parent=comp147008_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99818359	99818457	.	-	0	Parent=comp147008_c0_seq1.mrna1
Chr2	gffcl	locus	99819609	99820363	.	-	.	ID=RLOC_00019933;geneIDs=comp1146387_c0_seq1.path1;transcripts=comp1146387_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99819609	99820363	.	-	.	ID=comp1146387_c0_seq1.mrna1;geneID=comp1146387_c0_seq1.path1;Name=comp1146387_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=755;mismatches=0;indels=0;unknowns=0;Target=comp1146387_c0_seq1 755 1 .;CDS_Target=comp1146387_c0_seq1 156 1 .;locus=RLOC_00019933
Chr2	stalkie_big_nohaplotig	exon	99819609	99820363	100	-	.	Parent=comp1146387_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	99820208	99820363	.	-	0	Parent=comp1146387_c0_seq1.mrna1
Chr2	gffcl	locus	99820977	99821826	.	+	.	ID=RLOC_00019934;geneIDs=ORF2931.path1;transcripts=ORF2931.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99820977	99821826	.	+	.	ID=ORF2931.mrna1;geneID=ORF2931.path1;Name=ORF2931;Dir=sensecoverage=100.0;identity=100.0;matches=786;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019934
Chr2	stalkie_big_nohaplotig	exon	99820977	99821095	100	+	.	Parent=ORF2931.mrna1;Target=ORF2931 1 119 +
Chr2	stalkie_big_nohaplotig	exon	99821160	99821826	100	+	.	Parent=ORF2931.mrna1;Target=ORF2931 120 786 +
Chr2	stalkie_big_nohaplotig	CDS	99820977	99821095	.	+	0	Parent=ORF2931.mrna1;Target=ORF2931 1 119 +
Chr2	stalkie_big_nohaplotig	CDS	99821160	99821826	.	+	1	Parent=ORF2931.mrna1;Target=ORF2931 120 786 +
Chr2	gffcl	locus	99973575	99974437	.	-	.	ID=RLOC_00019935;geneIDs=ORF2811.path1;transcripts=ORF2811.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99973575	99974437	.	-	.	ID=ORF2811.mrna1;geneID=ORF2811.path1;Name=ORF2811;Dir=sensecoverage=100.0;identity=100.0;matches=804;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019935
Chr2	stalkie_big_nohaplotig	exon	99973575	99973801	100	-	.	Parent=ORF2811.mrna1;Target=ORF2811 578 804 +
Chr2	stalkie_big_nohaplotig	exon	99973861	99974437	100	-	.	Parent=ORF2811.mrna1;Target=ORF2811 1 577 +
Chr2	stalkie_big_nohaplotig	CDS	99973575	99973801	.	-	2	Parent=ORF2811.mrna1;Target=ORF2811 578 804 +
Chr2	stalkie_big_nohaplotig	CDS	99973861	99974437	.	-	0	Parent=ORF2811.mrna1;Target=ORF2811 1 577 +
Chr2	gffcl	locus	99985801	100122842	.	+	.	ID=RLOC_00019936;geneIDs=comp134981_c0_seq1.path1,comp151725_c0_seq1.path1;transcripts=comp151725_c0_seq1.mrna1,comp134981_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99985801	100122842	.	+	.	ID=comp151725_c0_seq1.mrna1;geneID=comp151725_c0_seq1.path1;Name=comp151725_c0_seq1;Dir=sensecoverage=72.6;identity=96.8;matches=937;mismatches=9;indels=22;unknowns=0;locus=RLOC_00019936
Chr2	stalkie_big_nohaplotig	exon	99985801	99986518	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 2 719 +
Chr2	stalkie_big_nohaplotig	exon	99986678	99986705	44	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 720 766 +
Chr2	stalkie_big_nohaplotig	exon	99990528	99990534	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 767 773 +
Chr2	stalkie_big_nohaplotig	exon	99992019	99992038	85	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 774 790 +
Chr2	stalkie_big_nohaplotig	exon	99993522	99993527	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 791 796 +
Chr2	stalkie_big_nohaplotig	exon	99994072	99994080	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 797 805 +
Chr2	stalkie_big_nohaplotig	exon	99996515	99996518	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 806 809 +
Chr2	stalkie_big_nohaplotig	exon	99999369	99999373	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 810 814 +
Chr2	stalkie_big_nohaplotig	exon	100004406	100004407	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 815 816 +
Chr2	stalkie_big_nohaplotig	exon	100009777	100009779	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 817 819 +
Chr2	stalkie_big_nohaplotig	exon	100016309	100016320	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 820 831 +
Chr2	stalkie_big_nohaplotig	exon	100018355	100018361	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 832 838 +
Chr2	stalkie_big_nohaplotig	exon	100021745	100021750	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 849 854 +
Chr2	stalkie_big_nohaplotig	exon	100029673	100029676	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 855 858 +
Chr2	stalkie_big_nohaplotig	exon	100035778	100035785	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 859 866 +
Chr2	stalkie_big_nohaplotig	exon	100041596	100041601	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 867 872 +
Chr2	stalkie_big_nohaplotig	exon	100045466	100045472	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 873 879 +
Chr2	stalkie_big_nohaplotig	exon	100049709	100049711	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 880 882 +
Chr2	stalkie_big_nohaplotig	exon	100055190	100055197	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 883 890 +
Chr2	stalkie_big_nohaplotig	exon	100059653	100059658	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 891 896 +
Chr2	stalkie_big_nohaplotig	exon	100066568	100066573	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 897 902 +
Chr2	stalkie_big_nohaplotig	exon	100068141	100068149	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 903 911 +
Chr2	stalkie_big_nohaplotig	exon	100074977	100074980	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 912 915 +
Chr2	stalkie_big_nohaplotig	exon	100088300	100088301	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 916 917 +
Chr2	stalkie_big_nohaplotig	exon	100090670	100090678	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 918 926 +
Chr2	stalkie_big_nohaplotig	exon	100097714	100097721	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 927 934 +
Chr2	stalkie_big_nohaplotig	exon	100100740	100100742	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 935 937 +
Chr2	stalkie_big_nohaplotig	exon	100108678	100108682	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 938 942 +
Chr2	stalkie_big_nohaplotig	exon	100111822	100111824	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 943 945 +
Chr2	stalkie_big_nohaplotig	exon	100113235	100113242	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 946 953 +
Chr2	stalkie_big_nohaplotig	exon	100117163	100117177	86	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 954 968 +
Chr2	stalkie_big_nohaplotig	exon	100120084	100120085	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 969 970 +
Chr2	stalkie_big_nohaplotig	exon	100122837	100122842	100	+	.	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 971 976 +
Chr2	stalkie_big_nohaplotig	CDS	99986492	99986518	.	+	0	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 693 719 +
Chr2	stalkie_big_nohaplotig	CDS	99986678	99986705	.	+	0	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 720 766 +
Chr2	stalkie_big_nohaplotig	CDS	99990528	99990534	.	+	2	Parent=comp151725_c0_seq1.mrna1;Target=comp151725_c0_seq1 767 773 +
Chr2	stalkie_big_nohaplotig	mRNA	100117032	100118137	.	+	.	ID=comp134981_c0_seq1.mrna1;geneID=comp134981_c0_seq1.path1;Name=comp134981_c0_seq1;Dir=indeterminatecoverage=97.8;identity=100.0;matches=1106;mismatches=0;indels=0;unknowns=0;Target=comp134981_c0_seq1 1125 20 .;CDS_Target=comp134981_c0_seq1 840 751 .;locus=RLOC_00019936
Chr2	stalkie_big_nohaplotig	exon	100117032	100118137	100	+	.	Parent=comp134981_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	100117763	100117852	.	+	0	Parent=comp134981_c0_seq1.mrna1
Chr2	gffcl	locus	99987237	100000901	.	-	.	ID=RLOC_00019937;geneIDs=FBgn0011766.1.path1;transcripts=FBgn0011766.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	99987237	100000901	.	-	.	ID=FBgn0011766.1.mrna1;geneID=FBgn0011766.1.path1;Name=FBgn0011766.1;Dir=sensecoverage=100.0;identity=100.0;matches=2511;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019937
Chr2	stalkie_big_nohaplotig	exon	99987237	99987343	100	-	.	Parent=FBgn0011766.1.mrna1;Target=FBgn0011766.1 2405 2511 +
Chr2	stalkie_big_nohaplotig	exon	99994747	99995625	100	-	.	Parent=FBgn0011766.1.mrna1;Target=FBgn0011766.1 1526 2404 +
Chr2	stalkie_big_nohaplotig	exon	99995702	99995912	100	-	.	Parent=FBgn0011766.1.mrna1;Target=FBgn0011766.1 1315 1525 +
Chr2	stalkie_big_nohaplotig	exon	99999490	100000176	100	-	.	Parent=FBgn0011766.1.mrna1;Target=FBgn0011766.1 628 1314 +
Chr2	stalkie_big_nohaplotig	exon	100000275	100000901	100	-	.	Parent=FBgn0011766.1.mrna1;Target=FBgn0011766.1 1 627 +
Chr2	stalkie_big_nohaplotig	CDS	99987237	99987343	.	-	2	Parent=FBgn0011766.1.mrna1;Target=FBgn0011766.1 2405 2511 +
Chr2	stalkie_big_nohaplotig	CDS	99994747	99995625	.	-	2	Parent=FBgn0011766.1.mrna1;Target=FBgn0011766.1 1526 2404 +
Chr2	stalkie_big_nohaplotig	CDS	99995702	99995912	.	-	0	Parent=FBgn0011766.1.mrna1;Target=FBgn0011766.1 1315 1525 +
Chr2	stalkie_big_nohaplotig	CDS	99999490	100000176	.	-	0	Parent=FBgn0011766.1.mrna1;Target=FBgn0011766.1 628 1314 +
Chr2	stalkie_big_nohaplotig	CDS	100000275	100000901	.	-	0	Parent=FBgn0011766.1.mrna1;Target=FBgn0011766.1 1 627 +
Chr2	gffcl	locus	100013477	100014635	.	-	.	ID=RLOC_00019938;geneIDs=comp144700_c0_seq1.path1;transcripts=comp144700_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100013477	100014635	.	-	.	ID=comp144700_c0_seq1.mrna1;geneID=comp144700_c0_seq1.path1;Name=comp144700_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.3;matches=1153;mismatches=5;indels=3;unknowns=0;Target=comp144700_c0_seq1 1166 7 .;CDS_Target=comp144700_c0_seq1 804 751 .;locus=RLOC_00019938
Chr2	stalkie_big_nohaplotig	exon	100013477	100014635	99	-	.	Parent=comp144700_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	100013838	100013890	.	-	0	Parent=comp144700_c0_seq1.mrna1
Chr2	gffcl	locus	100087254	100090086	.	-	.	ID=RLOC_00019939;geneIDs=FBgn0038893.1.path1;transcripts=FBgn0038893.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100087254	100090086	.	-	.	ID=FBgn0038893.1.mrna1;geneID=FBgn0038893.1.path1;Name=FBgn0038893.1;Dir=sensecoverage=100.0;identity=100.0;matches=486;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019939
Chr2	stalkie_big_nohaplotig	exon	100087254	100087641	100	-	.	Parent=FBgn0038893.1.mrna1;Target=FBgn0038893.1 99 486 +
Chr2	stalkie_big_nohaplotig	exon	100089917	100089941	100	-	.	Parent=FBgn0038893.1.mrna1;Target=FBgn0038893.1 74 98 +
Chr2	stalkie_big_nohaplotig	exon	100090014	100090086	100	-	.	Parent=FBgn0038893.1.mrna1;Target=FBgn0038893.1 1 73 +
Chr2	stalkie_big_nohaplotig	CDS	100087254	100087641	.	-	1	Parent=FBgn0038893.1.mrna1;Target=FBgn0038893.1 99 486 +
Chr2	stalkie_big_nohaplotig	CDS	100089917	100089941	.	-	2	Parent=FBgn0038893.1.mrna1;Target=FBgn0038893.1 74 98 +
Chr2	stalkie_big_nohaplotig	CDS	100090014	100090086	.	-	0	Parent=FBgn0038893.1.mrna1;Target=FBgn0038893.1 1 73 +
Chr2	gffcl	locus	100103714	100105539	.	+	.	ID=RLOC_00019940;geneIDs=FBgn0038894.1.path1;transcripts=FBgn0038894.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100103714	100105539	.	+	.	ID=FBgn0038894.1.mrna1;geneID=FBgn0038894.1.path1;Name=FBgn0038894.1;Dir=sensecoverage=100.0;identity=100.0;matches=852;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019940
Chr2	stalkie_big_nohaplotig	exon	100103714	100103990	100	+	.	Parent=FBgn0038894.1.mrna1;Target=FBgn0038894.1 1 277 +
Chr2	stalkie_big_nohaplotig	exon	100104062	100104359	100	+	.	Parent=FBgn0038894.1.mrna1;Target=FBgn0038894.1 278 575 +
Chr2	stalkie_big_nohaplotig	exon	100105263	100105539	100	+	.	Parent=FBgn0038894.1.mrna1;Target=FBgn0038894.1 576 852 +
Chr2	stalkie_big_nohaplotig	CDS	100103714	100103990	.	+	0	Parent=FBgn0038894.1.mrna1;Target=FBgn0038894.1 1 277 +
Chr2	stalkie_big_nohaplotig	CDS	100104062	100104359	.	+	2	Parent=FBgn0038894.1.mrna1;Target=FBgn0038894.1 278 575 +
Chr2	stalkie_big_nohaplotig	CDS	100105263	100105539	.	+	1	Parent=FBgn0038894.1.mrna1;Target=FBgn0038894.1 576 852 +
Chr2	gffcl	locus	100105779	100106524	.	+	.	ID=RLOC_00019941;geneIDs=comp136614_c0_seq1.path1;transcripts=comp136614_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100105779	100106524	.	+	.	ID=comp136614_c0_seq1.mrna1;geneID=comp136614_c0_seq1.path1;Name=comp136614_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=746;mismatches=0;indels=0;unknowns=0;Target=comp136614_c0_seq1 746 1 .;CDS_Target=comp136614_c0_seq1 248 156 .;locus=RLOC_00019941
Chr2	stalkie_big_nohaplotig	exon	100105779	100106524	100	+	.	Parent=comp136614_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	100105934	100106026	.	+	0	Parent=comp136614_c0_seq1.mrna1
Chr2	gffcl	locus	100106643	100113718	.	-	.	ID=RLOC_00019942;geneIDs=FBgn0259113.1.path1;transcripts=FBgn0259113.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100106643	100113718	.	-	.	ID=FBgn0259113.1.mrna1;geneID=FBgn0259113.1.path1;Name=FBgn0259113.1;Dir=sensecoverage=100.0;identity=100.0;matches=4482;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019942
Chr2	stalkie_big_nohaplotig	exon	100106643	100106845	100	-	.	Parent=FBgn0259113.1.mrna1;Target=FBgn0259113.1 4280 4482 +
Chr2	stalkie_big_nohaplotig	exon	100106910	100107382	100	-	.	Parent=FBgn0259113.1.mrna1;Target=FBgn0259113.1 3807 4279 +
Chr2	stalkie_big_nohaplotig	exon	100108709	100109267	100	-	.	Parent=FBgn0259113.1.mrna1;Target=FBgn0259113.1 3248 3806 +
Chr2	stalkie_big_nohaplotig	exon	100109336	100110307	100	-	.	Parent=FBgn0259113.1.mrna1;Target=FBgn0259113.1 2276 3247 +
Chr2	stalkie_big_nohaplotig	exon	100111190	100112033	100	-	.	Parent=FBgn0259113.1.mrna1;Target=FBgn0259113.1 1432 2275 +
Chr2	stalkie_big_nohaplotig	exon	100112099	100112284	100	-	.	Parent=FBgn0259113.1.mrna1;Target=FBgn0259113.1 1246 1431 +
Chr2	stalkie_big_nohaplotig	exon	100112352	100113373	100	-	.	Parent=FBgn0259113.1.mrna1;Target=FBgn0259113.1 224 1245 +
Chr2	stalkie_big_nohaplotig	exon	100113433	100113627	100	-	.	Parent=FBgn0259113.1.mrna1;Target=FBgn0259113.1 29 223 +
Chr2	stalkie_big_nohaplotig	exon	100113691	100113718	100	-	.	Parent=FBgn0259113.1.mrna1;Target=FBgn0259113.1 1 28 +
Chr2	stalkie_big_nohaplotig	CDS	100106643	100106845	.	-	2	Parent=FBgn0259113.1.mrna1;Target=FBgn0259113.1 4280 4482 +
Chr2	stalkie_big_nohaplotig	CDS	100106910	100107382	.	-	1	Parent=FBgn0259113.1.mrna1;Target=FBgn0259113.1 3807 4279 +
Chr2	stalkie_big_nohaplotig	CDS	100108709	100109267	.	-	2	Parent=FBgn0259113.1.mrna1;Target=FBgn0259113.1 3248 3806 +
Chr2	stalkie_big_nohaplotig	CDS	100109336	100110307	.	-	2	Parent=FBgn0259113.1.mrna1;Target=FBgn0259113.1 2276 3247 +
Chr2	stalkie_big_nohaplotig	CDS	100111190	100112033	.	-	0	Parent=FBgn0259113.1.mrna1;Target=FBgn0259113.1 1432 2275 +
Chr2	stalkie_big_nohaplotig	CDS	100112099	100112284	.	-	0	Parent=FBgn0259113.1.mrna1;Target=FBgn0259113.1 1246 1431 +
Chr2	stalkie_big_nohaplotig	CDS	100112352	100113373	.	-	2	Parent=FBgn0259113.1.mrna1;Target=FBgn0259113.1 224 1245 +
Chr2	stalkie_big_nohaplotig	CDS	100113433	100113627	.	-	2	Parent=FBgn0259113.1.mrna1;Target=FBgn0259113.1 29 223 +
Chr2	stalkie_big_nohaplotig	CDS	100113691	100113718	.	-	0	Parent=FBgn0259113.1.mrna1;Target=FBgn0259113.1 1 28 +
Chr2	stalkie_big_nohaplotig	mRNA	100118499	100121743	.	-	.	ID=FBgn0037615.1.mrna1;geneID=FBgn0037615.1.path1;Name=FBgn0037615.1;Dir=sensecoverage=100.0;identity=100.0;matches=453;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019943
Chr2	stalkie_big_nohaplotig	exon	100118499	100118689	100	-	.	Parent=FBgn0037615.1.mrna1;Target=FBgn0037615.1 263 453 +
Chr2	stalkie_big_nohaplotig	exon	100121482	100121743	100	-	.	Parent=FBgn0037615.1.mrna1;Target=FBgn0037615.1 1 262 +
Chr2	stalkie_big_nohaplotig	CDS	100118499	100118689	.	-	2	Parent=FBgn0037615.1.mrna1;Target=FBgn0037615.1 263 453 +
Chr2	stalkie_big_nohaplotig	CDS	100121482	100121743	.	-	0	Parent=FBgn0037615.1.mrna1;Target=FBgn0037615.1 1 262 +
Chr2	stalkie_big_nohaplotig	mRNA	100129520	100129776	.	-	.	ID=comp146816_c0_seq1.mrna1;geneID=comp146816_c0_seq1.path1;Name=comp146816_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=206;mismatches=1;indels=0;unknowns=0;Target=comp146816_c0_seq1 199 137 .;locus=RLOC_00019943
Chr2	stalkie_big_nohaplotig	exon	100129520	100129632	99	-	.	Parent=comp146816_c0_seq1.mrna1;Target=comp146816_c0_seq1 245 133 .
Chr2	stalkie_big_nohaplotig	exon	100129683	100129776	100	-	.	Parent=comp146816_c0_seq1.mrna1;Target=comp146816_c0_seq1 94 1 .
Chr2	stalkie_big_nohaplotig	CDS	100129566	100129628	.	-	0	Parent=comp146816_c0_seq1.mrna1
Chr2	gffcl	locus	100127094	100128545	.	-	.	ID=RLOC_00019944;geneIDs=comp152575_c0_seq1.path1;transcripts=comp152575_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100127094	100128545	.	-	.	ID=comp152575_c0_seq1.mrna1;geneID=comp152575_c0_seq1.path1;Name=comp152575_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.8;matches=1448;mismatches=4;indels=13;unknowns=0;Target=comp152575_c0_seq1 1466 2 .;CDS_Target=comp152575_c0_seq1 208 2 .;locus=RLOC_00019944
Chr2	stalkie_big_nohaplotig	exon	100127094	100128545	98	-	.	Parent=comp152575_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	100128339	100128545	.	-	0	Parent=comp152575_c0_seq1.mrna1
Chr2	gffcl	locus	100132999	100133446	.	+	.	ID=RLOC_00019945;geneIDs=FBgn0037613.1.path1,comp51915_c0_seq1.path1;transcripts=FBgn0037613.1.mrna1,comp51915_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100132999	100133446	.	+	.	ID=FBgn0037613.1.mrna1;geneID=FBgn0037613.1.path1;Name=FBgn0037613.1;Dir=sensecoverage=100.0;identity=100.0;matches=291;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019945
Chr2	stalkie_big_nohaplotig	exon	100132999	100133066	100	+	.	Parent=FBgn0037613.1.mrna1;Target=FBgn0037613.1 1 68 +
Chr2	stalkie_big_nohaplotig	exon	100133224	100133446	100	+	.	Parent=FBgn0037613.1.mrna1;Target=FBgn0037613.1 69 291 +
Chr2	stalkie_big_nohaplotig	CDS	100132999	100133066	.	+	0	Parent=FBgn0037613.1.mrna1;Target=FBgn0037613.1 1 68 +
Chr2	stalkie_big_nohaplotig	CDS	100133224	100133446	.	+	1	Parent=FBgn0037613.1.mrna1;Target=FBgn0037613.1 69 291 +
Chr2	stalkie_big_nohaplotig	mRNA	100133044	100133245	.	+	.	ID=comp51915_c0_seq1.mrna1;geneID=comp51915_c0_seq1.path1;Name=comp51915_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=202;mismatches=0;indels=0;unknowns=0;Target=comp51915_c0_seq1 202 1 .;CDS_Target=comp51915_c0_seq1 54 1 .;locus=RLOC_00019945
Chr2	stalkie_big_nohaplotig	exon	100133044	100133245	100	+	.	Parent=comp51915_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	100133044	100133097	.	+	0	Parent=comp51915_c0_seq1.mrna1
Chr2	gffcl	locus	100135187	100144926	.	-	.	ID=RLOC_00019946;geneIDs=FBgn0243511.1.path1;transcripts=FBgn0243511.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100135187	100144926	.	-	.	ID=FBgn0243511.1.mrna1;geneID=FBgn0243511.1.path1;Name=FBgn0243511.1;Dir=sensecoverage=100.0;identity=100.0;matches=2979;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019946
Chr2	stalkie_big_nohaplotig	exon	100135187	100135395	100	-	.	Parent=FBgn0243511.1.mrna1;Target=FBgn0243511.1 2771 2979 +
Chr2	stalkie_big_nohaplotig	exon	100137129	100137321	100	-	.	Parent=FBgn0243511.1.mrna1;Target=FBgn0243511.1 2578 2770 +
Chr2	stalkie_big_nohaplotig	exon	100137381	100138519	100	-	.	Parent=FBgn0243511.1.mrna1;Target=FBgn0243511.1 1439 2577 +
Chr2	stalkie_big_nohaplotig	exon	100138575	100138770	100	-	.	Parent=FBgn0243511.1.mrna1;Target=FBgn0243511.1 1243 1438 +
Chr2	stalkie_big_nohaplotig	exon	100138836	100139108	100	-	.	Parent=FBgn0243511.1.mrna1;Target=FBgn0243511.1 970 1242 +
Chr2	stalkie_big_nohaplotig	exon	100139166	100139298	100	-	.	Parent=FBgn0243511.1.mrna1;Target=FBgn0243511.1 837 969 +
Chr2	stalkie_big_nohaplotig	exon	100139365	100139663	100	-	.	Parent=FBgn0243511.1.mrna1;Target=FBgn0243511.1 538 836 +
Chr2	stalkie_big_nohaplotig	exon	100139739	100139932	100	-	.	Parent=FBgn0243511.1.mrna1;Target=FBgn0243511.1 344 537 +
Chr2	stalkie_big_nohaplotig	exon	100140410	100140634	100	-	.	Parent=FBgn0243511.1.mrna1;Target=FBgn0243511.1 119 343 +
Chr2	stalkie_big_nohaplotig	exon	100144809	100144926	100	-	.	Parent=FBgn0243511.1.mrna1;Target=FBgn0243511.1 1 118 +
Chr2	stalkie_big_nohaplotig	CDS	100135187	100135395	.	-	2	Parent=FBgn0243511.1.mrna1;Target=FBgn0243511.1 2771 2979 +
Chr2	stalkie_big_nohaplotig	CDS	100137129	100137321	.	-	0	Parent=FBgn0243511.1.mrna1;Target=FBgn0243511.1 2578 2770 +
Chr2	stalkie_big_nohaplotig	CDS	100137381	100138519	.	-	2	Parent=FBgn0243511.1.mrna1;Target=FBgn0243511.1 1439 2577 +
Chr2	stalkie_big_nohaplotig	CDS	100138575	100138770	.	-	0	Parent=FBgn0243511.1.mrna1;Target=FBgn0243511.1 1243 1438 +
Chr2	stalkie_big_nohaplotig	CDS	100138836	100139108	.	-	0	Parent=FBgn0243511.1.mrna1;Target=FBgn0243511.1 970 1242 +
Chr2	stalkie_big_nohaplotig	CDS	100139166	100139298	.	-	1	Parent=FBgn0243511.1.mrna1;Target=FBgn0243511.1 837 969 +
Chr2	stalkie_big_nohaplotig	CDS	100139365	100139663	.	-	0	Parent=FBgn0243511.1.mrna1;Target=FBgn0243511.1 538 836 +
Chr2	stalkie_big_nohaplotig	CDS	100139739	100139932	.	-	2	Parent=FBgn0243511.1.mrna1;Target=FBgn0243511.1 344 537 +
Chr2	stalkie_big_nohaplotig	CDS	100140410	100140634	.	-	2	Parent=FBgn0243511.1.mrna1;Target=FBgn0243511.1 119 343 +
Chr2	stalkie_big_nohaplotig	CDS	100144809	100144926	.	-	0	Parent=FBgn0243511.1.mrna1;Target=FBgn0243511.1 1 118 +
Chr2	gffcl	locus	100148419	100149792	.	+	.	ID=RLOC_00019947;geneIDs=FBgn0038763.1.path1;transcripts=FBgn0038763.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100148419	100149792	.	+	.	ID=FBgn0038763.1.mrna1;geneID=FBgn0038763.1.path1;Name=FBgn0038763.1;Dir=sensecoverage=100.0;identity=100.0;matches=984;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019947
Chr2	stalkie_big_nohaplotig	exon	100148419	100148842	100	+	.	Parent=FBgn0038763.1.mrna1;Target=FBgn0038763.1 1 424 +
Chr2	stalkie_big_nohaplotig	exon	100148893	100149183	100	+	.	Parent=FBgn0038763.1.mrna1;Target=FBgn0038763.1 425 715 +
Chr2	stalkie_big_nohaplotig	exon	100149453	100149546	100	+	.	Parent=FBgn0038763.1.mrna1;Target=FBgn0038763.1 716 809 +
Chr2	stalkie_big_nohaplotig	exon	100149618	100149792	100	+	.	Parent=FBgn0038763.1.mrna1;Target=FBgn0038763.1 810 984 +
Chr2	stalkie_big_nohaplotig	CDS	100148419	100148842	.	+	0	Parent=FBgn0038763.1.mrna1;Target=FBgn0038763.1 1 424 +
Chr2	stalkie_big_nohaplotig	CDS	100148893	100149183	.	+	2	Parent=FBgn0038763.1.mrna1;Target=FBgn0038763.1 425 715 +
Chr2	stalkie_big_nohaplotig	CDS	100149453	100149546	.	+	2	Parent=FBgn0038763.1.mrna1;Target=FBgn0038763.1 716 809 +
Chr2	stalkie_big_nohaplotig	CDS	100149618	100149792	.	+	1	Parent=FBgn0038763.1.mrna1;Target=FBgn0038763.1 810 984 +
Chr2	gffcl	locus	100181297	100186121	.	+	.	ID=RLOC_00019948;geneIDs=FBgn0262468.1.path1;transcripts=FBgn0262468.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100181297	100186121	.	+	.	ID=FBgn0262468.1.mrna1;geneID=FBgn0262468.1.path1;Name=FBgn0262468.1;Dir=sensecoverage=95.1;identity=100.0;matches=799;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019948
Chr2	stalkie_big_nohaplotig	exon	100181297	100181327	100	+	.	Parent=FBgn0262468.1.mrna1;Target=FBgn0262468.1 42 72 +
Chr2	stalkie_big_nohaplotig	exon	100181392	100181503	100	+	.	Parent=FBgn0262468.1.mrna1;Target=FBgn0262468.1 73 184 +
Chr2	stalkie_big_nohaplotig	exon	100181578	100181729	100	+	.	Parent=FBgn0262468.1.mrna1;Target=FBgn0262468.1 185 336 +
Chr2	stalkie_big_nohaplotig	exon	100183291	100183368	100	+	.	Parent=FBgn0262468.1.mrna1;Target=FBgn0262468.1 337 414 +
Chr2	stalkie_big_nohaplotig	exon	100183696	100183805	100	+	.	Parent=FBgn0262468.1.mrna1;Target=FBgn0262468.1 415 524 +
Chr2	stalkie_big_nohaplotig	exon	100183868	100184047	100	+	.	Parent=FBgn0262468.1.mrna1;Target=FBgn0262468.1 525 704 +
Chr2	stalkie_big_nohaplotig	exon	100185986	100186121	100	+	.	Parent=FBgn0262468.1.mrna1;Target=FBgn0262468.1 705 840 +
Chr2	stalkie_big_nohaplotig	CDS	100181298	100181327	.	+	0	Parent=FBgn0262468.1.mrna1;Target=FBgn0262468.1 43 72 +
Chr2	stalkie_big_nohaplotig	CDS	100181392	100181503	.	+	0	Parent=FBgn0262468.1.mrna1;Target=FBgn0262468.1 73 184 +
Chr2	stalkie_big_nohaplotig	CDS	100181578	100181729	.	+	2	Parent=FBgn0262468.1.mrna1;Target=FBgn0262468.1 185 336 +
Chr2	stalkie_big_nohaplotig	CDS	100183291	100183368	.	+	0	Parent=FBgn0262468.1.mrna1;Target=FBgn0262468.1 337 414 +
Chr2	stalkie_big_nohaplotig	CDS	100183696	100183805	.	+	0	Parent=FBgn0262468.1.mrna1;Target=FBgn0262468.1 415 524 +
Chr2	stalkie_big_nohaplotig	CDS	100183868	100184047	.	+	1	Parent=FBgn0262468.1.mrna1;Target=FBgn0262468.1 525 704 +
Chr2	stalkie_big_nohaplotig	CDS	100185986	100186121	.	+	1	Parent=FBgn0262468.1.mrna1;Target=FBgn0262468.1 705 840 +
Chr2	gffcl	locus	100188555	100189578	.	+	.	ID=RLOC_00019949;geneIDs=comp135166_c0_seq1.path1;transcripts=comp135166_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100188555	100189578	.	+	.	ID=comp135166_c0_seq1.mrna1;geneID=comp135166_c0_seq1.path1;Name=comp135166_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1024;mismatches=0;indels=0;unknowns=0;Target=comp135166_c0_seq1 1024 1 .;CDS_Target=comp135166_c0_seq1 697 548 .;locus=RLOC_00019949
Chr2	stalkie_big_nohaplotig	exon	100188555	100189578	100	+	.	Parent=comp135166_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	100189102	100189251	.	+	0	Parent=comp135166_c0_seq1.mrna1
Chr2	gffcl	locus	100190709	100191025	.	+	.	ID=RLOC_00019950;geneIDs=comp143880_c1_seq1.path1;transcripts=comp143880_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100190709	100191025	.	+	.	ID=comp143880_c1_seq1.mrna1;geneID=comp143880_c1_seq1.path1;Name=comp143880_c1_seq1;Dir=indeterminatecoverage=96.0;identity=99.4;matches=315;mismatches=1;indels=1;unknowns=0;Target=comp143880_c1_seq1 329 14 .;CDS_Target=comp143880_c1_seq1 53 15 .;locus=RLOC_00019950
Chr2	stalkie_big_nohaplotig	exon	100190709	100191025	99	+	.	Parent=comp143880_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	100190710	100190749	.	+	0	Parent=comp143880_c1_seq1.mrna1
Chr2	gffcl	locus	100192161	100196519	.	-	.	ID=RLOC_00019951;geneIDs=FBgn0025680.1.path1;transcripts=FBgn0025680.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100192161	100196519	.	-	.	ID=FBgn0025680.1.mrna1;geneID=FBgn0025680.1.path1;Name=FBgn0025680.1;Dir=sensecoverage=100.0;identity=100.0;matches=1632;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019951
Chr2	stalkie_big_nohaplotig	exon	100192161	100192389	100	-	.	Parent=FBgn0025680.1.mrna1;Target=FBgn0025680.1 1404 1632 +
Chr2	stalkie_big_nohaplotig	exon	100192456	100193206	100	-	.	Parent=FBgn0025680.1.mrna1;Target=FBgn0025680.1 653 1403 +
Chr2	stalkie_big_nohaplotig	exon	100193305	100193356	100	-	.	Parent=FBgn0025680.1.mrna1;Target=FBgn0025680.1 601 652 +
Chr2	stalkie_big_nohaplotig	exon	100195748	100195864	100	-	.	Parent=FBgn0025680.1.mrna1;Target=FBgn0025680.1 484 600 +
Chr2	stalkie_big_nohaplotig	exon	100195933	100196276	100	-	.	Parent=FBgn0025680.1.mrna1;Target=FBgn0025680.1 140 483 +
Chr2	stalkie_big_nohaplotig	exon	100196381	100196519	100	-	.	Parent=FBgn0025680.1.mrna1;Target=FBgn0025680.1 1 139 +
Chr2	stalkie_big_nohaplotig	CDS	100192161	100192389	.	-	1	Parent=FBgn0025680.1.mrna1;Target=FBgn0025680.1 1404 1632 +
Chr2	stalkie_big_nohaplotig	CDS	100192456	100193206	.	-	2	Parent=FBgn0025680.1.mrna1;Target=FBgn0025680.1 653 1403 +
Chr2	stalkie_big_nohaplotig	CDS	100193305	100193356	.	-	0	Parent=FBgn0025680.1.mrna1;Target=FBgn0025680.1 601 652 +
Chr2	stalkie_big_nohaplotig	CDS	100195748	100195864	.	-	0	Parent=FBgn0025680.1.mrna1;Target=FBgn0025680.1 484 600 +
Chr2	stalkie_big_nohaplotig	CDS	100195933	100196276	.	-	2	Parent=FBgn0025680.1.mrna1;Target=FBgn0025680.1 140 483 +
Chr2	stalkie_big_nohaplotig	CDS	100196381	100196519	.	-	0	Parent=FBgn0025680.1.mrna1;Target=FBgn0025680.1 1 139 +
Chr2	gffcl	locus	100194491	100194879	.	-	.	ID=RLOC_00019952;geneIDs=comp155010_c1_seq1.path1;transcripts=comp155010_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100194491	100194879	.	-	.	ID=comp155010_c1_seq1.mrna1;geneID=comp155010_c1_seq1.path1;Name=comp155010_c1_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=380;mismatches=9;indels=3;unknowns=0;Target=comp155010_c1_seq1 392 1 .;CDS_Target=comp155010_c1_seq1 392 3 .;locus=RLOC_00019952
Chr2	stalkie_big_nohaplotig	exon	100194491	100194879	96	-	.	Parent=comp155010_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	100194491	100194877	.	-	0	Parent=comp155010_c1_seq1.mrna1
Chr2	gffcl	locus	100201928	100202518	.	-	.	ID=RLOC_00019953;geneIDs=comp147243_c1_seq1.path1;transcripts=comp147243_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100201928	100202518	.	-	.	ID=comp147243_c1_seq1.mrna1;geneID=comp147243_c1_seq1.path1;Name=comp147243_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=590;mismatches=0;indels=1;unknowns=0;Target=comp147243_c1_seq1 590 1 .;CDS_Target=comp147243_c1_seq1 514 377 .;locus=RLOC_00019953
Chr2	stalkie_big_nohaplotig	exon	100201928	100202518	99	-	.	Parent=comp147243_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	100202004	100202141	.	-	0	Parent=comp147243_c1_seq1.mrna1
Chr2	gffcl	locus	100222341	100224474	.	.	.	ID=RLOC_00019956;geneIDs=FBgn0038686.1.path1,comp119286_c0_seq1.path1;transcripts=FBgn0038686.1.mrna1,comp119286_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100222341	100224474	.	+	.	ID=FBgn0038686.1.mrna1;geneID=FBgn0038686.1.path1;Name=FBgn0038686.1;Dir=sensecoverage=99.1;identity=100.0;matches=1255;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019956
Chr2	stalkie_big_nohaplotig	exon	100222341	100222416	100	+	.	Parent=FBgn0038686.1.mrna1;Target=FBgn0038686.1 1 76 +
Chr2	stalkie_big_nohaplotig	exon	100222482	100222785	100	+	.	Parent=FBgn0038686.1.mrna1;Target=FBgn0038686.1 77 380 +
Chr2	stalkie_big_nohaplotig	exon	100222846	100223016	100	+	.	Parent=FBgn0038686.1.mrna1;Target=FBgn0038686.1 381 551 +
Chr2	stalkie_big_nohaplotig	exon	100223076	100223242	100	+	.	Parent=FBgn0038686.1.mrna1;Target=FBgn0038686.1 552 718 +
Chr2	stalkie_big_nohaplotig	exon	100223938	100224474	100	+	.	Parent=FBgn0038686.1.mrna1;Target=FBgn0038686.1 719 1255 +
Chr2	stalkie_big_nohaplotig	CDS	100222341	100222416	.	+	0	Parent=FBgn0038686.1.mrna1;Target=FBgn0038686.1 1 76 +
Chr2	stalkie_big_nohaplotig	CDS	100222482	100222785	.	+	2	Parent=FBgn0038686.1.mrna1;Target=FBgn0038686.1 77 380 +
Chr2	stalkie_big_nohaplotig	CDS	100222846	100223016	.	+	1	Parent=FBgn0038686.1.mrna1;Target=FBgn0038686.1 381 551 +
Chr2	stalkie_big_nohaplotig	CDS	100223076	100223242	.	+	1	Parent=FBgn0038686.1.mrna1;Target=FBgn0038686.1 552 718 +
Chr2	stalkie_big_nohaplotig	CDS	100223938	100224473	.	+	2	Parent=FBgn0038686.1.mrna1;Target=FBgn0038686.1 719 1254 +
Chr2	stalkie_big_nohaplotig	mRNA	100223219	100223591	.	-	.	ID=comp119286_c0_seq1.mrna1;geneID=comp119286_c0_seq1.path1;Name=comp119286_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=373;mismatches=0;indels=0;unknowns=0;Target=comp119286_c0_seq1 373 1 .;CDS_Target=comp119286_c0_seq1 309 193 .;locus=RLOC_00019956
Chr2	stalkie_big_nohaplotig	exon	100223219	100223591	100	-	.	Parent=comp119286_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	100223283	100223399	.	-	0	Parent=comp119286_c0_seq1.mrna1
Chr2	gffcl	locus	100257688	100258688	.	+	.	ID=RLOC_00019957;geneIDs=comp155769_c0_seq1.path1;transcripts=comp155769_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100257688	100258688	.	+	.	ID=comp155769_c0_seq1.mrna1;geneID=comp155769_c0_seq1.path1;Name=comp155769_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=999;mismatches=2;indels=8;unknowns=0;Target=comp155769_c0_seq1 1009 1 .;CDS_Target=comp155769_c0_seq1 733 611 .;locus=RLOC_00019957
Chr2	stalkie_big_nohaplotig	exon	100257688	100258688	99	+	.	Parent=comp155769_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	100258292	100258412	.	+	0	Parent=comp155769_c0_seq1.mrna1
Chr2	gffcl	locus	100260689	100261324	.	-	.	ID=RLOC_00019958;geneIDs=comp149688_c1_seq1.path1;transcripts=comp149688_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100260689	100261324	.	-	.	ID=comp149688_c1_seq1.mrna1;geneID=comp149688_c1_seq1.path1;Name=comp149688_c1_seq1;Dir=indeterminatecoverage=79.8;identity=94.6;matches=405;mismatches=11;indels=12;unknowns=0;locus=RLOC_00019958
Chr2	stalkie_big_nohaplotig	exon	100260689	100261053	95	-	.	Parent=comp149688_c1_seq1.mrna1;Target=comp149688_c1_seq1 665 292 .
Chr2	stalkie_big_nohaplotig	exon	100261271	100261324	88	-	.	Parent=comp149688_c1_seq1.mrna1;Target=comp149688_c1_seq1 185 135 .
Chr2	stalkie_big_nohaplotig	CDS	100261033	100261053	.	-	1	Parent=comp149688_c1_seq1.mrna1;Target=comp149688_c1_seq1 312 292 .
Chr2	stalkie_big_nohaplotig	CDS	100261271	100261323	.	-	0	Parent=comp149688_c1_seq1.mrna1;Target=comp149688_c1_seq1 185 136 .
Chr2	gffcl	locus	100261386	100261886	.	-	.	ID=RLOC_00019959;geneIDs=comp106368_c0_seq1.path1;transcripts=comp106368_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100261386	100261886	.	-	.	ID=comp106368_c0_seq1.mrna1;geneID=comp106368_c0_seq1.path1;Name=comp106368_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=500;mismatches=1;indels=0;unknowns=0;Target=comp106368_c0_seq1 501 1 .;CDS_Target=comp106368_c0_seq1 456 352 .;locus=RLOC_00019959
Chr2	stalkie_big_nohaplotig	exon	100261386	100261886	99	-	.	Parent=comp106368_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	100261431	100261535	.	-	0	Parent=comp106368_c0_seq1.mrna1
Chr2	gffcl	locus	100262385	100263941	.	-	.	ID=RLOC_00019960;geneIDs=FBgn0010768.1.path1;transcripts=FBgn0010768.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100262385	100263941	.	-	.	ID=FBgn0010768.1.mrna1;geneID=FBgn0010768.1.path1;Name=FBgn0010768.1;Dir=sensecoverage=100.0;identity=100.0;matches=1362;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019960
Chr2	stalkie_big_nohaplotig	exon	100262385	100263635	100	-	.	Parent=FBgn0010768.1.mrna1;Target=FBgn0010768.1 112 1362 +
Chr2	stalkie_big_nohaplotig	exon	100263831	100263941	100	-	.	Parent=FBgn0010768.1.mrna1;Target=FBgn0010768.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	100262385	100263635	.	-	0	Parent=FBgn0010768.1.mrna1;Target=FBgn0010768.1 112 1362 +
Chr2	stalkie_big_nohaplotig	CDS	100263831	100263941	.	-	0	Parent=FBgn0010768.1.mrna1;Target=FBgn0010768.1 1 111 +
Chr2	gffcl	locus	100264020	100264409	.	-	.	ID=RLOC_00019961;geneIDs=Dp_FBgn0078967.path1;transcripts=Dp_FBgn0078967.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100264020	100264409	.	-	.	ID=Dp_FBgn0078967.mrna1;geneID=Dp_FBgn0078967.path1;Name=Dp_FBgn0078967;Dir=indeterminatecoverage=100.0;identity=100.0;matches=390;mismatches=0;indels=0;unknowns=0;Target=Dp_FBgn0078967 390 1 .;locus=RLOC_00019961
Chr2	stalkie_big_nohaplotig	exon	100264020	100264409	100	-	.	Parent=Dp_FBgn0078967.mrna1
Chr2	stalkie_big_nohaplotig	CDS	100264020	100264409	.	-	0	Parent=Dp_FBgn0078967.mrna1
Chr2	gffcl	locus	100340581	100341806	.	-	.	ID=RLOC_00019962;geneIDs=ORF1283.path1;transcripts=ORF1283.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100340581	100341806	.	-	.	ID=ORF1283.mrna1;geneID=ORF1283.path1;Name=ORF1283;Dir=sensecoverage=100.0;identity=99.9;matches=1154;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019962
Chr2	stalkie_big_nohaplotig	exon	100340581	100341680	99	-	.	Parent=ORF1283.mrna1;Target=ORF1283 56 1155 +
Chr2	stalkie_big_nohaplotig	exon	100341752	100341806	100	-	.	Parent=ORF1283.mrna1;Target=ORF1283 1 55 +
Chr2	stalkie_big_nohaplotig	CDS	100340581	100341680	.	-	2	Parent=ORF1283.mrna1;Target=ORF1283 56 1155 +
Chr2	stalkie_big_nohaplotig	CDS	100341752	100341806	.	-	0	Parent=ORF1283.mrna1;Target=ORF1283 1 55 +
Chr2	gffcl	locus	100366387	100566612	.	.	.	ID=RLOC_00019963;geneIDs=FBgn0259172.1.path1,comp107895_c0_seq1.path1,comp151161_c0_seq1.path1;transcripts=comp151161_c0_seq1.mrna1,FBgn0259172.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100366387	100566612	.	+	.	ID=comp151161_c0_seq1.mrna1;geneID=comp151161_c0_seq1.path1;Name=comp151161_c0_seq1;Dir=indeterminatecoverage=89.9;identity=89.8;matches=543;mismatches=22;indels=40;unknowns=0;locus=RLOC_00019963
Chr2	stalkie_big_nohaplotig	exon	100366387	100366390	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 70 67 .
Chr2	stalkie_big_nohaplotig	exon	100404745	100404748	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 74 71 .
Chr2	stalkie_big_nohaplotig	exon	100407320	100407321	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 76 75 .
Chr2	stalkie_big_nohaplotig	exon	100412663	100412666	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 80 77 .
Chr2	stalkie_big_nohaplotig	exon	100415874	100415879	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 86 81 .
Chr2	stalkie_big_nohaplotig	exon	100417041	100417045	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 91 87 .
Chr2	stalkie_big_nohaplotig	exon	100427740	100427804	54	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 187 92 .
Chr2	stalkie_big_nohaplotig	exon	100429394	100429402	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 196 188 .
Chr2	stalkie_big_nohaplotig	exon	100430674	100430680	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 203 197 .
Chr2	stalkie_big_nohaplotig	exon	100449436	100449438	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 206 204 .
Chr2	stalkie_big_nohaplotig	exon	100449636	100449639	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 210 207 .
Chr2	stalkie_big_nohaplotig	exon	100457019	100457021	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 213 211 .
Chr2	stalkie_big_nohaplotig	exon	100462348	100462352	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 218 214 .
Chr2	stalkie_big_nohaplotig	exon	100462635	100462641	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 225 219 .
Chr2	stalkie_big_nohaplotig	exon	100468138	100468142	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 230 226 .
Chr2	stalkie_big_nohaplotig	exon	100468241	100468242	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 232 231 .
Chr2	stalkie_big_nohaplotig	exon	100475850	100475858	88	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 241 233 .
Chr2	stalkie_big_nohaplotig	exon	100481749	100481754	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 247 242 .
Chr2	stalkie_big_nohaplotig	exon	100509782	100509787	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 253 248 .
Chr2	stalkie_big_nohaplotig	exon	100518660	100518661	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 255 254 .
Chr2	stalkie_big_nohaplotig	exon	100521856	100521865	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 265 256 .
Chr2	stalkie_big_nohaplotig	exon	100529177	100529181	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 270 266 .
Chr2	stalkie_big_nohaplotig	exon	100545245	100545252	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 278 271 .
Chr2	stalkie_big_nohaplotig	exon	100551536	100551552	76	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 294 279 .
Chr2	stalkie_big_nohaplotig	exon	100553702	100553703	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 296 295 .
Chr2	stalkie_big_nohaplotig	exon	100556169	100556173	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 301 297 .
Chr2	stalkie_big_nohaplotig	exon	100563135	100563140	100	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 307 302 .
Chr2	stalkie_big_nohaplotig	exon	100566250	100566612	96	+	.	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 662 308 .
Chr2	stalkie_big_nohaplotig	CDS	100366388	100366390	.	+	0	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 70 68 .
Chr2	stalkie_big_nohaplotig	CDS	100404745	100404748	.	+	0	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 74 71 .
Chr2	stalkie_big_nohaplotig	CDS	100407320	100407321	.	+	2	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 76 75 .
Chr2	stalkie_big_nohaplotig	CDS	100412663	100412666	.	+	0	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 80 77 .
Chr2	stalkie_big_nohaplotig	CDS	100415874	100415879	.	+	2	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 86 81 .
Chr2	stalkie_big_nohaplotig	CDS	100417041	100417045	.	+	2	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 91 87 .
Chr2	stalkie_big_nohaplotig	CDS	100427740	100427760	.	+	0	Parent=comp151161_c0_seq1.mrna1;Target=comp151161_c0_seq1 130 92 .
Chr2	stalkie_big_nohaplotig	mRNA	100446500	100526604	.	+	.	ID=FBgn0259172.1.mrna1;geneID=FBgn0259172.1.path1;Name=FBgn0259172.1;Dir=sensecoverage=100.0;identity=99.9;matches=1997;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019963
Chr2	stalkie_big_nohaplotig	exon	100446500	100446793	100	+	.	Parent=FBgn0259172.1.mrna1;Target=FBgn0259172.1 1 294 +
Chr2	stalkie_big_nohaplotig	exon	100449443	100449943	100	+	.	Parent=FBgn0259172.1.mrna1;Target=FBgn0259172.1 295 795 +
Chr2	stalkie_big_nohaplotig	exon	100461419	100461505	100	+	.	Parent=FBgn0259172.1.mrna1;Target=FBgn0259172.1 796 882 +
Chr2	stalkie_big_nohaplotig	exon	100466415	100466451	100	+	.	Parent=FBgn0259172.1.mrna1;Target=FBgn0259172.1 883 919 +
Chr2	stalkie_big_nohaplotig	exon	100470954	100471282	99	+	.	Parent=FBgn0259172.1.mrna1;Target=FBgn0259172.1 920 1248 +
Chr2	stalkie_big_nohaplotig	exon	100525798	100526398	100	+	.	Parent=FBgn0259172.1.mrna1;Target=FBgn0259172.1 1249 1849 +
Chr2	stalkie_big_nohaplotig	exon	100526456	100526604	100	+	.	Parent=FBgn0259172.1.mrna1;Target=FBgn0259172.1 1850 1998 +
Chr2	stalkie_big_nohaplotig	CDS	100446500	100446793	.	+	0	Parent=FBgn0259172.1.mrna1;Target=FBgn0259172.1 1 294 +
Chr2	stalkie_big_nohaplotig	CDS	100449443	100449943	.	+	0	Parent=FBgn0259172.1.mrna1;Target=FBgn0259172.1 295 795 +
Chr2	stalkie_big_nohaplotig	CDS	100461419	100461505	.	+	0	Parent=FBgn0259172.1.mrna1;Target=FBgn0259172.1 796 882 +
Chr2	stalkie_big_nohaplotig	CDS	100466415	100466451	.	+	0	Parent=FBgn0259172.1.mrna1;Target=FBgn0259172.1 883 919 +
Chr2	stalkie_big_nohaplotig	CDS	100470954	100471282	.	+	2	Parent=FBgn0259172.1.mrna1;Target=FBgn0259172.1 920 1248 +
Chr2	stalkie_big_nohaplotig	CDS	100525798	100526398	.	+	0	Parent=FBgn0259172.1.mrna1;Target=FBgn0259172.1 1249 1849 +
Chr2	stalkie_big_nohaplotig	CDS	100526456	100526604	.	+	2	Parent=FBgn0259172.1.mrna1;Target=FBgn0259172.1 1850 1998 +
Chr2	gffcl	locus	100445127	100445549	.	+	.	ID=RLOC_00019964;geneIDs=comp146445_c0_seq1.path1;transcripts=comp146445_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100445127	100445549	.	+	.	ID=comp146445_c0_seq1.mrna1;geneID=comp146445_c0_seq1.path1;Name=comp146445_c0_seq1;Dir=indeterminatecoverage=60.8;identity=99.3;matches=420;mismatches=3;indels=0;unknowns=0;Target=comp146445_c0_seq1 423 1 .;CDS_Target=comp146445_c0_seq1 245 114 .;locus=RLOC_00019964
Chr2	stalkie_big_nohaplotig	exon	100445127	100445549	99	+	.	Parent=comp146445_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	100445240	100445371	.	+	0	Parent=comp146445_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100531311	101583521	.	+	.	ID=comp161973_c1_seq1.mrna1;geneID=comp161973_c1_seq1.path1;Name=comp161973_c1_seq1;Dir=indeterminatecoverage=84.3;identity=98.1;matches=1917;mismatches=0;indels=37;unknowns=0;Target=comp161973_c1_seq1 527 384 .;locus=RLOC_00019965
Chr2	stalkie_big_nohaplotig	exon	100531311	100532955	99	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1663 18 .
Chr2	stalkie_big_nohaplotig	exon	101419726	101419748	60	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1677 1664 .
Chr2	stalkie_big_nohaplotig	exon	101426923	101426925	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1680 1678 .
Chr2	stalkie_big_nohaplotig	exon	101434109	101434114	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1686 1681 .
Chr2	stalkie_big_nohaplotig	exon	101437946	101437949	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1690 1687 .
Chr2	stalkie_big_nohaplotig	exon	101444147	101444148	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1692 1691 .
Chr2	stalkie_big_nohaplotig	exon	101446791	101446792	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1694 1693 .
Chr2	stalkie_big_nohaplotig	exon	101461314	101461326	30	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1698 1695 .
Chr2	stalkie_big_nohaplotig	exon	101465372	101465381	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1708 1699 .
Chr2	stalkie_big_nohaplotig	exon	101472043	101472047	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1713 1709 .
Chr2	stalkie_big_nohaplotig	exon	101473041	101473055	40	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1719 1714 .
Chr2	stalkie_big_nohaplotig	exon	101476125	101476135	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1730 1720 .
Chr2	stalkie_big_nohaplotig	exon	101480173	101480175	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1734 1732 .
Chr2	stalkie_big_nohaplotig	exon	101484415	101484417	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1737 1735 .
Chr2	stalkie_big_nohaplotig	exon	101491491	101491493	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1740 1738 .
Chr2	stalkie_big_nohaplotig	exon	101496599	101496606	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1748 1741 .
Chr2	stalkie_big_nohaplotig	exon	101501325	101501326	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1750 1749 .
Chr2	stalkie_big_nohaplotig	exon	101504874	101504886	30	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1754 1751 .
Chr2	stalkie_big_nohaplotig	exon	101508085	101508086	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1756 1755 .
Chr2	stalkie_big_nohaplotig	exon	101515612	101515615	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1760 1757 .
Chr2	stalkie_big_nohaplotig	exon	101518839	101518844	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1766 1761 .
Chr2	stalkie_big_nohaplotig	exon	101519051	101519060	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1776 1767 .
Chr2	stalkie_big_nohaplotig	exon	101519076	101519083	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1821 1814 .
Chr2	stalkie_big_nohaplotig	exon	101519814	101519815	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1827 1826 .
Chr2	stalkie_big_nohaplotig	exon	101521303	101521310	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1835 1828 .
Chr2	stalkie_big_nohaplotig	exon	101521318	101521323	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1855 1850 .
Chr2	stalkie_big_nohaplotig	exon	101523943	101523950	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1863 1856 .
Chr2	stalkie_big_nohaplotig	exon	101523960	101523968	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1893 1885 .
Chr2	stalkie_big_nohaplotig	exon	101523993	101524000	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1920 1913 .
Chr2	stalkie_big_nohaplotig	exon	101524018	101524020	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1951 1949 .
Chr2	stalkie_big_nohaplotig	exon	101525626	101525633	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 1959 1952 .
Chr2	stalkie_big_nohaplotig	exon	101525646	101525652	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 2009 2003 .
Chr2	stalkie_big_nohaplotig	exon	101528000	101528003	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 2013 2010 .
Chr2	stalkie_big_nohaplotig	exon	101535567	101535569	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 2016 2014 .
Chr2	stalkie_big_nohaplotig	exon	101536515	101536520	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 2022 2017 .
Chr2	stalkie_big_nohaplotig	exon	101541752	101541759	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 2030 2023 .
Chr2	stalkie_big_nohaplotig	exon	101541787	101541792	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 2068 2063 .
Chr2	stalkie_big_nohaplotig	exon	101546248	101546255	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 2076 2069 .
Chr2	stalkie_big_nohaplotig	exon	101546270	101546272	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 2094 2092 .
Chr2	stalkie_big_nohaplotig	exon	101556709	101556712	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 2099 2096 .
Chr2	stalkie_big_nohaplotig	exon	101559369	101559374	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 2105 2100 .
Chr2	stalkie_big_nohaplotig	exon	101564835	101564841	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 2112 2106 .
Chr2	stalkie_big_nohaplotig	exon	101570145	101570154	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 2122 2113 .
Chr2	stalkie_big_nohaplotig	exon	101573230	101573238	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 2137 2129 .
Chr2	stalkie_big_nohaplotig	exon	101575267	101575269	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 2140 2138 .
Chr2	stalkie_big_nohaplotig	exon	101581350	101581353	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 2144 2141 .
Chr2	stalkie_big_nohaplotig	exon	101583512	101583521	100	+	.	Parent=comp161973_c1_seq1.mrna1;Target=comp161973_c1_seq1 2154 2145 .
Chr2	stalkie_big_nohaplotig	CDS	100531676	100531819	.	+	0	Parent=comp161973_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101357627	101512634	.	+	.	ID=comp158834_c1_seq1.mrna1;geneID=comp158834_c1_seq1.path1;Name=comp158834_c1_seq1;Dir=antisensecoverage=51.1;identity=99.6;matches=7342;mismatches=4;indels=25;unknowns=0;locus=RLOC_00019965
Chr2	stalkie_big_nohaplotig	exon	101357627	101357789	99	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 14345 14507 -
Chr2	stalkie_big_nohaplotig	exon	101363286	101363865	99	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 13764 14344 -
Chr2	stalkie_big_nohaplotig	exon	101401090	101401148	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 13705 13763 -
Chr2	stalkie_big_nohaplotig	exon	101433409	101433428	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 13685 13704 -
Chr2	stalkie_big_nohaplotig	exon	101487055	101487134	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 13605 13684 -
Chr2	stalkie_big_nohaplotig	exon	101487471	101487817	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 13258 13604 -
Chr2	stalkie_big_nohaplotig	exon	101488671	101488992	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 12936 13257 -
Chr2	stalkie_big_nohaplotig	exon	101490348	101490540	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 12743 12935 -
Chr2	stalkie_big_nohaplotig	exon	101490706	101490818	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 12630 12742 -
Chr2	stalkie_big_nohaplotig	exon	101490875	101491792	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 11712 12629 -
Chr2	stalkie_big_nohaplotig	exon	101491992	101492185	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 11518 11711 -
Chr2	stalkie_big_nohaplotig	exon	101492284	101492598	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 11203 11517 -
Chr2	stalkie_big_nohaplotig	exon	101492656	101492884	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 10974 11202 -
Chr2	stalkie_big_nohaplotig	exon	101492993	101493211	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 10755 10973 -
Chr2	stalkie_big_nohaplotig	exon	101493275	101493379	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 10650 10754 -
Chr2	stalkie_big_nohaplotig	exon	101494669	101495268	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 10050 10649 -
Chr2	stalkie_big_nohaplotig	exon	101495384	101495791	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 9642 10049 -
Chr2	stalkie_big_nohaplotig	exon	101495863	101495952	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 9552 9641 -
Chr2	stalkie_big_nohaplotig	exon	101496011	101496111	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 9451 9551 -
Chr2	stalkie_big_nohaplotig	exon	101496178	101496483	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 9145 9450 -
Chr2	stalkie_big_nohaplotig	exon	101496547	101496724	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 8967 9144 -
Chr2	stalkie_big_nohaplotig	exon	101496795	101496969	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 8792 8966 -
Chr2	stalkie_big_nohaplotig	exon	101500757	101500884	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 8664 8791 -
Chr2	stalkie_big_nohaplotig	exon	101500973	101501171	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 8465 8663 -
Chr2	stalkie_big_nohaplotig	exon	101501237	101501313	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 8388 8464 -
Chr2	stalkie_big_nohaplotig	exon	101501375	101501535	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 8227 8387 -
Chr2	stalkie_big_nohaplotig	exon	101502420	101502521	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 8125 8226 -
Chr2	stalkie_big_nohaplotig	exon	101502603	101502684	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 8043 8124 -
Chr2	stalkie_big_nohaplotig	exon	101502760	101502972	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 7830 8042 -
Chr2	stalkie_big_nohaplotig	exon	101504135	101504751	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 7213 7829 -
Chr2	stalkie_big_nohaplotig	exon	101504860	101504890	44	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 7177 7212 -
Chr2	stalkie_big_nohaplotig	exon	101507928	101507940	100	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 7163 7175 -
Chr2	stalkie_big_nohaplotig	exon	101512618	101512634	88	+	.	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 7088 7103 -
Chr2	stalkie_big_nohaplotig	CDS	101488963	101488992	.	+	0	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 12936 12965 .
Chr2	stalkie_big_nohaplotig	CDS	101490348	101490540	.	+	0	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 12743 12935 .
Chr2	stalkie_big_nohaplotig	CDS	101490706	101490818	.	+	2	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 12630 12742 .
Chr2	stalkie_big_nohaplotig	CDS	101490875	101491792	.	+	0	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 11712 12629 .
Chr2	stalkie_big_nohaplotig	CDS	101491992	101492185	.	+	0	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 11518 11711 .
Chr2	stalkie_big_nohaplotig	CDS	101492284	101492598	.	+	1	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 11203 11517 .
Chr2	stalkie_big_nohaplotig	CDS	101492656	101492884	.	+	1	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 10974 11202 .
Chr2	stalkie_big_nohaplotig	CDS	101492993	101493211	.	+	0	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 10755 10973 .
Chr2	stalkie_big_nohaplotig	CDS	101493275	101493379	.	+	0	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 10650 10754 .
Chr2	stalkie_big_nohaplotig	CDS	101494669	101495268	.	+	0	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 10050 10649 .
Chr2	stalkie_big_nohaplotig	CDS	101495384	101495791	.	+	0	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 9642 10049 .
Chr2	stalkie_big_nohaplotig	CDS	101495863	101495952	.	+	0	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 9552 9641 .
Chr2	stalkie_big_nohaplotig	CDS	101496011	101496111	.	+	0	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 9451 9551 .
Chr2	stalkie_big_nohaplotig	CDS	101496178	101496483	.	+	1	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 9145 9450 .
Chr2	stalkie_big_nohaplotig	CDS	101496547	101496724	.	+	1	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 8967 9144 .
Chr2	stalkie_big_nohaplotig	CDS	101496795	101496969	.	+	0	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 8792 8966 .
Chr2	stalkie_big_nohaplotig	CDS	101500757	101500884	.	+	2	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 8664 8791 .
Chr2	stalkie_big_nohaplotig	CDS	101500973	101501171	.	+	0	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 8465 8663 .
Chr2	stalkie_big_nohaplotig	CDS	101501237	101501313	.	+	2	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 8388 8464 .
Chr2	stalkie_big_nohaplotig	CDS	101501375	101501535	.	+	0	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 8227 8387 .
Chr2	stalkie_big_nohaplotig	CDS	101502420	101502521	.	+	1	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 8125 8226 .
Chr2	stalkie_big_nohaplotig	CDS	101502603	101502684	.	+	1	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 8043 8124 .
Chr2	stalkie_big_nohaplotig	CDS	101502760	101502972	.	+	0	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 7830 8042 .
Chr2	stalkie_big_nohaplotig	CDS	101504135	101504209	.	+	0	Parent=comp158834_c1_seq1.mrna1;Target=comp158834_c1_seq1 7755 7829 .
Chr2	stalkie_big_nohaplotig	mRNA	101487065	101504206	.	+	.	ID=FBgn0037963.1.mrna1;geneID=FBgn0037963.1.path1;Name=FBgn0037963.1;Dir=sensecoverage=100.0;identity=100.0;matches=5856;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019965
Chr2	stalkie_big_nohaplotig	exon	101487065	101487134	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 1 70 +
Chr2	stalkie_big_nohaplotig	exon	101487471	101487817	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 71 417 +
Chr2	stalkie_big_nohaplotig	exon	101488671	101488816	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 418 563 +
Chr2	stalkie_big_nohaplotig	exon	101488878	101488992	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 564 678 +
Chr2	stalkie_big_nohaplotig	exon	101490348	101490540	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 679 871 +
Chr2	stalkie_big_nohaplotig	exon	101490706	101490818	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 872 984 +
Chr2	stalkie_big_nohaplotig	exon	101490875	101491792	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 985 1902 +
Chr2	stalkie_big_nohaplotig	exon	101491992	101492185	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 1903 2096 +
Chr2	stalkie_big_nohaplotig	exon	101492284	101492598	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 2097 2411 +
Chr2	stalkie_big_nohaplotig	exon	101492656	101492884	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 2412 2640 +
Chr2	stalkie_big_nohaplotig	exon	101492993	101493211	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 2641 2859 +
Chr2	stalkie_big_nohaplotig	exon	101493275	101493379	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 2860 2964 +
Chr2	stalkie_big_nohaplotig	exon	101494669	101495268	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 2965 3564 +
Chr2	stalkie_big_nohaplotig	exon	101495384	101495791	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 3565 3972 +
Chr2	stalkie_big_nohaplotig	exon	101495863	101495952	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 3973 4062 +
Chr2	stalkie_big_nohaplotig	exon	101496011	101496111	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 4063 4163 +
Chr2	stalkie_big_nohaplotig	exon	101496178	101496483	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 4164 4469 +
Chr2	stalkie_big_nohaplotig	exon	101496547	101496724	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 4470 4647 +
Chr2	stalkie_big_nohaplotig	exon	101496795	101496969	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 4648 4822 +
Chr2	stalkie_big_nohaplotig	exon	101500757	101500884	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 4823 4950 +
Chr2	stalkie_big_nohaplotig	exon	101500973	101501171	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 4951 5149 +
Chr2	stalkie_big_nohaplotig	exon	101501237	101501313	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 5150 5226 +
Chr2	stalkie_big_nohaplotig	exon	101501375	101501535	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 5227 5387 +
Chr2	stalkie_big_nohaplotig	exon	101502420	101502521	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 5388 5489 +
Chr2	stalkie_big_nohaplotig	exon	101502603	101502684	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 5490 5571 +
Chr2	stalkie_big_nohaplotig	exon	101502760	101502972	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 5572 5784 +
Chr2	stalkie_big_nohaplotig	exon	101504135	101504206	100	+	.	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 5785 5856 +
Chr2	stalkie_big_nohaplotig	CDS	101487065	101487134	.	+	0	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 1 70 +
Chr2	stalkie_big_nohaplotig	CDS	101487471	101487817	.	+	2	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 71 417 +
Chr2	stalkie_big_nohaplotig	CDS	101488671	101488816	.	+	0	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 418 563 +
Chr2	stalkie_big_nohaplotig	CDS	101488878	101488992	.	+	1	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 564 678 +
Chr2	stalkie_big_nohaplotig	CDS	101490348	101490540	.	+	0	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 679 871 +
Chr2	stalkie_big_nohaplotig	CDS	101490706	101490818	.	+	2	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 872 984 +
Chr2	stalkie_big_nohaplotig	CDS	101490875	101491792	.	+	0	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 985 1902 +
Chr2	stalkie_big_nohaplotig	CDS	101491992	101492185	.	+	0	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 1903 2096 +
Chr2	stalkie_big_nohaplotig	CDS	101492284	101492598	.	+	1	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 2097 2411 +
Chr2	stalkie_big_nohaplotig	CDS	101492656	101492884	.	+	1	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 2412 2640 +
Chr2	stalkie_big_nohaplotig	CDS	101492993	101493211	.	+	0	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 2641 2859 +
Chr2	stalkie_big_nohaplotig	CDS	101493275	101493379	.	+	0	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 2860 2964 +
Chr2	stalkie_big_nohaplotig	CDS	101494669	101495268	.	+	0	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 2965 3564 +
Chr2	stalkie_big_nohaplotig	CDS	101495384	101495791	.	+	0	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 3565 3972 +
Chr2	stalkie_big_nohaplotig	CDS	101495863	101495952	.	+	0	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 3973 4062 +
Chr2	stalkie_big_nohaplotig	CDS	101496011	101496111	.	+	0	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 4063 4163 +
Chr2	stalkie_big_nohaplotig	CDS	101496178	101496483	.	+	1	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 4164 4469 +
Chr2	stalkie_big_nohaplotig	CDS	101496547	101496724	.	+	1	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 4470 4647 +
Chr2	stalkie_big_nohaplotig	CDS	101496795	101496969	.	+	0	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 4648 4822 +
Chr2	stalkie_big_nohaplotig	CDS	101500757	101500884	.	+	2	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 4823 4950 +
Chr2	stalkie_big_nohaplotig	CDS	101500973	101501171	.	+	0	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 4951 5149 +
Chr2	stalkie_big_nohaplotig	CDS	101501237	101501313	.	+	2	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 5150 5226 +
Chr2	stalkie_big_nohaplotig	CDS	101501375	101501535	.	+	0	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 5227 5387 +
Chr2	stalkie_big_nohaplotig	CDS	101502420	101502521	.	+	1	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 5388 5489 +
Chr2	stalkie_big_nohaplotig	CDS	101502603	101502684	.	+	1	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 5490 5571 +
Chr2	stalkie_big_nohaplotig	CDS	101502760	101502972	.	+	0	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 5572 5784 +
Chr2	stalkie_big_nohaplotig	CDS	101504135	101504206	.	+	0	Parent=FBgn0037963.1.mrna1;Target=FBgn0037963.1 5785 5856 +
Chr2	stalkie_big_nohaplotig	mRNA	101504877	101505431	.	-	.	ID=comp116038_c0_seq1.mrna1;geneID=comp116038_c0_seq1.path1;Name=comp116038_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=555;mismatches=0;indels=0;unknowns=0;Target=comp116038_c0_seq1 555 1 .;CDS_Target=comp116038_c0_seq1 554 480 .;locus=RLOC_00019965
Chr2	stalkie_big_nohaplotig	exon	101504877	101505431	100	-	.	Parent=comp116038_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101504878	101504952	.	-	0	Parent=comp116038_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101520718	101521801	.	-	.	ID=comp113535_c0_seq1.mrna1;geneID=comp113535_c0_seq1.path1;Name=comp113535_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1084;mismatches=0;indels=0;unknowns=0;Target=comp113535_c0_seq1 1084 1 .;CDS_Target=comp113535_c0_seq1 107 3 .;locus=RLOC_00019965
Chr2	stalkie_big_nohaplotig	exon	101520718	101521801	100	-	.	Parent=comp113535_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101521695	101521799	.	-	0	Parent=comp113535_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101565268	101573037	.	+	.	ID=FBgn0039207.1.mrna1;geneID=FBgn0039207.1.path1;Name=FBgn0039207.1;Dir=sensecoverage=100.0;identity=100.0;matches=4216;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019965
Chr2	stalkie_big_nohaplotig	exon	101565268	101565498	100	+	.	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 3 233 +
Chr2	stalkie_big_nohaplotig	exon	101565570	101565701	100	+	.	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 234 365 +
Chr2	stalkie_big_nohaplotig	exon	101565764	101565945	100	+	.	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 366 547 +
Chr2	stalkie_big_nohaplotig	exon	101567373	101567629	100	+	.	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 548 804 +
Chr2	stalkie_big_nohaplotig	exon	101567693	101568544	100	+	.	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 805 1656 +
Chr2	stalkie_big_nohaplotig	exon	101568614	101568891	100	+	.	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 1657 1934 +
Chr2	stalkie_big_nohaplotig	exon	101568979	101569417	100	+	.	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 1935 2373 +
Chr2	stalkie_big_nohaplotig	exon	101569482	101569772	100	+	.	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 2374 2664 +
Chr2	stalkie_big_nohaplotig	exon	101569842	101570196	100	+	.	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 2665 3019 +
Chr2	stalkie_big_nohaplotig	exon	101571643	101571873	100	+	.	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 3020 3250 +
Chr2	stalkie_big_nohaplotig	exon	101571934	101572466	100	+	.	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 3251 3783 +
Chr2	stalkie_big_nohaplotig	exon	101572535	101572695	100	+	.	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 3784 3944 +
Chr2	stalkie_big_nohaplotig	exon	101572764	101573037	100	+	.	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 3945 4218 +
Chr2	stalkie_big_nohaplotig	CDS	101565269	101565498	.	+	0	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 4 233 +
Chr2	stalkie_big_nohaplotig	CDS	101565570	101565701	.	+	1	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 234 365 +
Chr2	stalkie_big_nohaplotig	CDS	101565764	101565945	.	+	1	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 366 547 +
Chr2	stalkie_big_nohaplotig	CDS	101567373	101567629	.	+	2	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 548 804 +
Chr2	stalkie_big_nohaplotig	CDS	101567693	101568544	.	+	0	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 805 1656 +
Chr2	stalkie_big_nohaplotig	CDS	101568614	101568891	.	+	0	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 1657 1934 +
Chr2	stalkie_big_nohaplotig	CDS	101568979	101569417	.	+	1	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 1935 2373 +
Chr2	stalkie_big_nohaplotig	CDS	101569482	101569772	.	+	0	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 2374 2664 +
Chr2	stalkie_big_nohaplotig	CDS	101569842	101570196	.	+	0	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 2665 3019 +
Chr2	stalkie_big_nohaplotig	CDS	101571643	101571873	.	+	2	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 3020 3250 +
Chr2	stalkie_big_nohaplotig	CDS	101571934	101572466	.	+	2	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 3251 3783 +
Chr2	stalkie_big_nohaplotig	CDS	101572535	101572695	.	+	0	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 3784 3944 +
Chr2	stalkie_big_nohaplotig	CDS	101572764	101573037	.	+	1	Parent=FBgn0039207.1.mrna1;Target=FBgn0039207.1 3945 4218 +
Chr2	stalkie_big_nohaplotig	mRNA	101570723	101571687	.	+	.	ID=comp762398_c0_seq1.mrna1;geneID=comp762398_c0_seq1.path1;Name=comp762398_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.8;matches=963;mismatches=2;indels=0;unknowns=0;Target=comp762398_c0_seq1 965 1 .;CDS_Target=comp762398_c0_seq1 807 667 .;locus=RLOC_00019965
Chr2	stalkie_big_nohaplotig	exon	101570723	101571687	99	+	.	Parent=comp762398_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101571389	101571529	.	+	0	Parent=comp762398_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101573171	101573602	.	-	.	ID=comp189337_c0_seq1.mrna1;geneID=comp189337_c0_seq1.path1;Name=comp189337_c0_seq1;Dir=indeterminatecoverage=97.5;identity=100.0;matches=432;mismatches=0;indels=0;unknowns=0;Target=comp189337_c0_seq1 438 7 .;CDS_Target=comp189337_c0_seq1 47 9 .;locus=RLOC_00019965
Chr2	stalkie_big_nohaplotig	exon	101573171	101573602	100	-	.	Parent=comp189337_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101573562	101573600	.	-	0	Parent=comp189337_c0_seq1.mrna1
Chr2	gffcl	locus	100545732	100552466	.	-	.	ID=RLOC_00019966;geneIDs=FBgn0051217.2.path1;transcripts=FBgn0051217.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100545732	100552466	.	-	.	ID=FBgn0051217.2.mrna1;geneID=FBgn0051217.2.path1;Name=FBgn0051217.2;Dir=sensecoverage=100.0;identity=100.0;matches=1674;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019966
Chr2	stalkie_big_nohaplotig	exon	100545732	100546053	100	-	.	Parent=FBgn0051217.2.mrna1;Target=FBgn0051217.2 1353 1674 +
Chr2	stalkie_big_nohaplotig	exon	100546683	100546812	100	-	.	Parent=FBgn0051217.2.mrna1;Target=FBgn0051217.2 1223 1352 +
Chr2	stalkie_big_nohaplotig	exon	100549460	100549819	100	-	.	Parent=FBgn0051217.2.mrna1;Target=FBgn0051217.2 863 1222 +
Chr2	stalkie_big_nohaplotig	exon	100549876	100550378	100	-	.	Parent=FBgn0051217.2.mrna1;Target=FBgn0051217.2 360 862 +
Chr2	stalkie_big_nohaplotig	exon	100550453	100550741	100	-	.	Parent=FBgn0051217.2.mrna1;Target=FBgn0051217.2 71 359 +
Chr2	stalkie_big_nohaplotig	exon	100552397	100552466	100	-	.	Parent=FBgn0051217.2.mrna1;Target=FBgn0051217.2 1 70 +
Chr2	stalkie_big_nohaplotig	CDS	100545732	100546053	.	-	1	Parent=FBgn0051217.2.mrna1;Target=FBgn0051217.2 1353 1674 +
Chr2	stalkie_big_nohaplotig	CDS	100546683	100546812	.	-	2	Parent=FBgn0051217.2.mrna1;Target=FBgn0051217.2 1223 1352 +
Chr2	stalkie_big_nohaplotig	CDS	100549460	100549819	.	-	2	Parent=FBgn0051217.2.mrna1;Target=FBgn0051217.2 863 1222 +
Chr2	stalkie_big_nohaplotig	CDS	100549876	100550378	.	-	1	Parent=FBgn0051217.2.mrna1;Target=FBgn0051217.2 360 862 +
Chr2	stalkie_big_nohaplotig	CDS	100550453	100550741	.	-	2	Parent=FBgn0051217.2.mrna1;Target=FBgn0051217.2 71 359 +
Chr2	stalkie_big_nohaplotig	CDS	100552397	100552466	.	-	0	Parent=FBgn0051217.2.mrna1;Target=FBgn0051217.2 1 70 +
Chr2	gffcl	locus	100557484	100560844	.	-	.	ID=RLOC_00019967;geneIDs=FBgn0051217.1.path1;transcripts=FBgn0051217.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100557484	100560844	.	-	.	ID=FBgn0051217.1.mrna1;geneID=FBgn0051217.1.path1;Name=FBgn0051217.1;Dir=sensecoverage=100.0;identity=99.9;matches=1568;mismatches=0;indels=1;unknowns=0;locus=RLOC_00019967
Chr2	stalkie_big_nohaplotig	exon	100557484	100557976	100	-	.	Parent=FBgn0051217.1.mrna1;Target=FBgn0051217.1 1077 1569 +
Chr2	stalkie_big_nohaplotig	exon	100558033	100558186	100	-	.	Parent=FBgn0051217.1.mrna1;Target=FBgn0051217.1 923 1076 +
Chr2	stalkie_big_nohaplotig	exon	100558244	100558642	100	-	.	Parent=FBgn0051217.1.mrna1;Target=FBgn0051217.1 524 922 +
Chr2	stalkie_big_nohaplotig	exon	100558701	100559158	100	-	.	Parent=FBgn0051217.1.mrna1;Target=FBgn0051217.1 66 523 +
Chr2	stalkie_big_nohaplotig	exon	100560781	100560844	98	-	.	Parent=FBgn0051217.1.mrna1;Target=FBgn0051217.1 1 65 +
Chr2	stalkie_big_nohaplotig	CDS	100559150	100559158	.	-	1	Parent=FBgn0051217.1.mrna1;Target=FBgn0051217.1 66 74 +
Chr2	stalkie_big_nohaplotig	CDS	100560781	100560842	.	-	0	Parent=FBgn0051217.1.mrna1;Target=FBgn0051217.1 3 65 +
Chr2	gffcl	locus	100566848	102531390	.	.	.	ID=RLOC_00019968;geneIDs=comp159380_c1_seq1.path1,comp161303_c0_seq1.path1;transcripts=comp161303_c0_seq1.mrna1,comp159380_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100566848	102531390	.	+	.	ID=comp161303_c0_seq1.mrna1;geneID=comp161303_c0_seq1.path1;Name=comp161303_c0_seq1;Dir=indeterminatecoverage=68.5;identity=92.6;matches=1288;mismatches=35;indels=68;unknowns=0;Target=comp161303_c0_seq1 459 358 .;locus=RLOC_00019968
Chr2	stalkie_big_nohaplotig	exon	100566848	100567888	99	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1042 1 .
Chr2	stalkie_big_nohaplotig	exon	102478471	102478477	100	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1049 1043 .
Chr2	stalkie_big_nohaplotig	exon	102483656	102483657	100	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1051 1050 .
Chr2	stalkie_big_nohaplotig	exon	102491227	102491232	100	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1057 1052 .
Chr2	stalkie_big_nohaplotig	exon	102493644	102493691	35	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1074 1058 .
Chr2	stalkie_big_nohaplotig	exon	102494111	102494115	100	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1079 1075 .
Chr2	stalkie_big_nohaplotig	exon	102498079	102498083	100	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1084 1080 .
Chr2	stalkie_big_nohaplotig	exon	102498330	102498336	100	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1091 1085 .
Chr2	stalkie_big_nohaplotig	exon	102499531	102499535	100	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1096 1092 .
Chr2	stalkie_big_nohaplotig	exon	102499543	102499544	100	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1152 1151 .
Chr2	stalkie_big_nohaplotig	exon	102506124	102506130	100	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1159 1153 .
Chr2	stalkie_big_nohaplotig	exon	102506901	102506924	57	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1197 1160 .
Chr2	stalkie_big_nohaplotig	exon	102509264	102509269	100	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1217 1212 .
Chr2	stalkie_big_nohaplotig	exon	102509368	102509379	83	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1229 1218 .
Chr2	stalkie_big_nohaplotig	exon	102511712	102511721	90	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1239 1230 .
Chr2	stalkie_big_nohaplotig	exon	102512476	102512488	76	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1252 1240 .
Chr2	stalkie_big_nohaplotig	exon	102513019	102513069	61	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1317 1253 .
Chr2	stalkie_big_nohaplotig	exon	102513516	102513526	81	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1328 1318 .
Chr2	stalkie_big_nohaplotig	exon	102515099	102515105	100	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1335 1329 .
Chr2	stalkie_big_nohaplotig	exon	102516488	102516491	100	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1339 1336 .
Chr2	stalkie_big_nohaplotig	exon	102517571	102517580	100	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1349 1340 .
Chr2	stalkie_big_nohaplotig	exon	102519062	102519065	100	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1353 1350 .
Chr2	stalkie_big_nohaplotig	exon	102523322	102523338	83	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1371 1354 .
Chr2	stalkie_big_nohaplotig	exon	102527789	102527796	100	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1379 1372 .
Chr2	stalkie_big_nohaplotig	exon	102527817	102527821	100	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1436 1432 .
Chr2	stalkie_big_nohaplotig	exon	102528281	102528314	64	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1463 1437 .
Chr2	stalkie_big_nohaplotig	exon	102531382	102531390	77	+	.	Parent=comp161303_c0_seq1.mrna1;Target=comp161303_c0_seq1 1472 1464 .
Chr2	stalkie_big_nohaplotig	CDS	100567205	100567306	.	+	0	Parent=comp161303_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102489972	102491486	.	-	.	ID=comp159380_c1_seq1.mrna1;geneID=comp159380_c1_seq1.path1;Name=comp159380_c1_seq1;Dir=indeterminatecoverage=94.7;identity=99.7;matches=1511;mismatches=4;indels=0;unknowns=0;Target=comp159380_c1_seq1 1529 15 .;CDS_Target=comp159380_c1_seq1 1498 1349 .;locus=RLOC_00019968
Chr2	stalkie_big_nohaplotig	exon	102489972	102491486	99	-	.	Parent=comp159380_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	102490003	102490152	.	-	0	Parent=comp159380_c1_seq1.mrna1
Chr2	gffcl	locus	100568988	100570175	.	.	.	ID=RLOC_00019969;geneIDs=comp71722_c1_seq1.path1,comp145600_c0_seq1.path1;transcripts=comp145600_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100569469	100570175	.	-	.	ID=comp145600_c0_seq1.mrna1;geneID=comp145600_c0_seq1.path1;Name=comp145600_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.6;matches=704;mismatches=3;indels=0;unknowns=0;Target=comp145600_c0_seq1 707 1 .;CDS_Target=comp145600_c0_seq1 307 209 .;locus=RLOC_00019969
Chr2	stalkie_big_nohaplotig	exon	100569469	100570175	99	-	.	Parent=comp145600_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	100569869	100569967	.	-	0	Parent=comp145600_c0_seq1.mrna1
Chr2	gffcl	locus	100570534	100624934	.	.	.	ID=RLOC_00019970;geneIDs=FBgn0037912.1.path1,comp113240_c0_seq1.path1,comp143724_c0_seq1.path1,comp146279_c0_seq1.path1;transcripts=comp146279_c0_seq1.mrna1,comp113240_c0_seq1.mrna1,FBgn0037912.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100570854	100624837	.	+	.	ID=comp146279_c0_seq1.mrna1;geneID=comp146279_c0_seq1.path1;Name=comp146279_c0_seq1;Dir=indeterminatecoverage=46.0;identity=87.5;matches=301;mismatches=26;indels=17;unknowns=0;locus=RLOC_00019970
Chr2	stalkie_big_nohaplotig	exon	100570854	100571022	100	+	.	Parent=comp146279_c0_seq1.mrna1;Target=comp146279_c0_seq1 169 1 .
Chr2	stalkie_big_nohaplotig	exon	100572729	100572738	80	+	.	Parent=comp146279_c0_seq1.mrna1;Target=comp146279_c0_seq1 179 170 .
Chr2	stalkie_big_nohaplotig	exon	100578841	100578843	100	+	.	Parent=comp146279_c0_seq1.mrna1;Target=comp146279_c0_seq1 182 180 .
Chr2	stalkie_big_nohaplotig	exon	100579301	100579308	100	+	.	Parent=comp146279_c0_seq1.mrna1;Target=comp146279_c0_seq1 194 187 .
Chr2	stalkie_big_nohaplotig	exon	100580991	100581042	60	+	.	Parent=comp146279_c0_seq1.mrna1;Target=comp146279_c0_seq1 247 195 .
Chr2	stalkie_big_nohaplotig	exon	100596704	100596707	100	+	.	Parent=comp146279_c0_seq1.mrna1;Target=comp146279_c0_seq1 251 248 .
Chr2	stalkie_big_nohaplotig	exon	100603069	100603072	100	+	.	Parent=comp146279_c0_seq1.mrna1;Target=comp146279_c0_seq1 263 260 .
Chr2	stalkie_big_nohaplotig	exon	100604629	100604676	65	+	.	Parent=comp146279_c0_seq1.mrna1;Target=comp146279_c0_seq1 315 264 .
Chr2	stalkie_big_nohaplotig	exon	100610263	100610266	100	+	.	Parent=comp146279_c0_seq1.mrna1;Target=comp146279_c0_seq1 319 316 .
Chr2	stalkie_big_nohaplotig	exon	100612394	100612400	100	+	.	Parent=comp146279_c0_seq1.mrna1;Target=comp146279_c0_seq1 326 320 .
Chr2	stalkie_big_nohaplotig	exon	100614516	100614518	100	+	.	Parent=comp146279_c0_seq1.mrna1;Target=comp146279_c0_seq1 329 327 .
Chr2	stalkie_big_nohaplotig	exon	100618389	100618397	100	+	.	Parent=comp146279_c0_seq1.mrna1;Target=comp146279_c0_seq1 338 330 .
Chr2	stalkie_big_nohaplotig	exon	100624827	100624837	100	+	.	Parent=comp146279_c0_seq1.mrna1;Target=comp146279_c0_seq1 364 354 .
Chr2	stalkie_big_nohaplotig	CDS	100570968	100571022	.	+	0	Parent=comp146279_c0_seq1.mrna1;Target=comp146279_c0_seq1 169 115 .
Chr2	stalkie_big_nohaplotig	CDS	100572729	100572738	.	+	2	Parent=comp146279_c0_seq1.mrna1;Target=comp146279_c0_seq1 179 170 .
Chr2	stalkie_big_nohaplotig	CDS	100578841	100578843	.	+	1	Parent=comp146279_c0_seq1.mrna1;Target=comp146279_c0_seq1 182 180 .
Chr2	stalkie_big_nohaplotig	CDS	100579301	100579308	.	+	1	Parent=comp146279_c0_seq1.mrna1;Target=comp146279_c0_seq1 194 187 .
Chr2	stalkie_big_nohaplotig	CDS	100580991	100581042	.	+	2	Parent=comp146279_c0_seq1.mrna1;Target=comp146279_c0_seq1 247 195 .
Chr2	stalkie_big_nohaplotig	CDS	100596704	100596707	.	+	1	Parent=comp146279_c0_seq1.mrna1;Target=comp146279_c0_seq1 251 248 .
Chr2	stalkie_big_nohaplotig	CDS	100603069	100603072	.	+	0	Parent=comp146279_c0_seq1.mrna1;Target=comp146279_c0_seq1 263 260 .
Chr2	stalkie_big_nohaplotig	CDS	100604629	100604632	.	+	2	Parent=comp146279_c0_seq1.mrna1;Target=comp146279_c0_seq1 267 264 .
Chr2	stalkie_big_nohaplotig	mRNA	100619179	100623758	.	+	.	ID=comp113240_c0_seq1.mrna1;geneID=comp113240_c0_seq1.path1;Name=comp113240_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=318;mismatches=1;indels=0;unknowns=0;locus=RLOC_00019970
Chr2	stalkie_big_nohaplotig	exon	100619179	100619473	99	+	.	Parent=comp113240_c0_seq1.mrna1;Target=comp113240_c0_seq1 25 319 -
Chr2	stalkie_big_nohaplotig	exon	100623735	100623758	100	+	.	Parent=comp113240_c0_seq1.mrna1;Target=comp113240_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	CDS	100619316	100619473	.	+	0	Parent=comp113240_c0_seq1.mrna1;Target=comp113240_c0_seq1 25 182 .
Chr2	stalkie_big_nohaplotig	CDS	100623735	100623756	.	+	1	Parent=comp113240_c0_seq1.mrna1;Target=comp113240_c0_seq1 3 24 .
Chr2	stalkie_big_nohaplotig	mRNA	100623749	100624934	.	+	.	ID=FBgn0037912.1.mrna1;geneID=FBgn0037912.1.path1;Name=FBgn0037912.1;Dir=sensecoverage=100.0;identity=100.0;matches=966;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019970
Chr2	stalkie_big_nohaplotig	exon	100623749	100623962	100	+	.	Parent=FBgn0037912.1.mrna1;Target=FBgn0037912.1 1 214 +
Chr2	stalkie_big_nohaplotig	exon	100624049	100624175	100	+	.	Parent=FBgn0037912.1.mrna1;Target=FBgn0037912.1 215 341 +
Chr2	stalkie_big_nohaplotig	exon	100624230	100624453	100	+	.	Parent=FBgn0037912.1.mrna1;Target=FBgn0037912.1 342 565 +
Chr2	stalkie_big_nohaplotig	exon	100624534	100624934	100	+	.	Parent=FBgn0037912.1.mrna1;Target=FBgn0037912.1 566 966 +
Chr2	stalkie_big_nohaplotig	CDS	100623749	100623962	.	+	0	Parent=FBgn0037912.1.mrna1;Target=FBgn0037912.1 1 214 +
Chr2	stalkie_big_nohaplotig	CDS	100624049	100624175	.	+	2	Parent=FBgn0037912.1.mrna1;Target=FBgn0037912.1 215 341 +
Chr2	stalkie_big_nohaplotig	CDS	100624230	100624453	.	+	1	Parent=FBgn0037912.1.mrna1;Target=FBgn0037912.1 342 565 +
Chr2	stalkie_big_nohaplotig	CDS	100624534	100624934	.	+	2	Parent=FBgn0037912.1.mrna1;Target=FBgn0037912.1 566 966 +
Chr2	gffcl	locus	100573119	100579918	.	-	.	ID=RLOC_00019971;geneIDs=FBgn0028400.1.path1;transcripts=FBgn0028400.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100573119	100579918	.	-	.	ID=FBgn0028400.1.mrna1;geneID=FBgn0028400.1.path1;Name=FBgn0028400.1;Dir=sensecoverage=100.0;identity=100.0;matches=1389;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019971
Chr2	stalkie_big_nohaplotig	exon	100573119	100573235	100	-	.	Parent=FBgn0028400.1.mrna1;Target=FBgn0028400.1 1273 1389 +
Chr2	stalkie_big_nohaplotig	exon	100575040	100575114	100	-	.	Parent=FBgn0028400.1.mrna1;Target=FBgn0028400.1 1198 1272 +
Chr2	stalkie_big_nohaplotig	exon	100575175	100576301	100	-	.	Parent=FBgn0028400.1.mrna1;Target=FBgn0028400.1 71 1197 +
Chr2	stalkie_big_nohaplotig	exon	100579849	100579918	100	-	.	Parent=FBgn0028400.1.mrna1;Target=FBgn0028400.1 1 70 +
Chr2	stalkie_big_nohaplotig	CDS	100573119	100573235	.	-	0	Parent=FBgn0028400.1.mrna1;Target=FBgn0028400.1 1273 1389 +
Chr2	stalkie_big_nohaplotig	CDS	100575040	100575114	.	-	0	Parent=FBgn0028400.1.mrna1;Target=FBgn0028400.1 1198 1272 +
Chr2	stalkie_big_nohaplotig	CDS	100575175	100576301	.	-	2	Parent=FBgn0028400.1.mrna1;Target=FBgn0028400.1 71 1197 +
Chr2	stalkie_big_nohaplotig	CDS	100579849	100579918	.	-	0	Parent=FBgn0028400.1.mrna1;Target=FBgn0028400.1 1 70 +
Chr2	gffcl	locus	100582165	100583770	.	-	.	ID=RLOC_00019972;geneIDs=FBgn0038429.1.path1;transcripts=FBgn0038429.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100582165	100583770	.	-	.	ID=FBgn0038429.1.mrna1;geneID=FBgn0038429.1.path1;Name=FBgn0038429.1;Dir=sensecoverage=99.5;identity=99.4;matches=1442;mismatches=8;indels=0;unknowns=0;locus=RLOC_00019972
Chr2	stalkie_big_nohaplotig	exon	100582165	100583295	99	-	.	Parent=FBgn0038429.1.mrna1;Target=FBgn0038429.1 328 1458 +
Chr2	stalkie_big_nohaplotig	exon	100583363	100583524	100	-	.	Parent=FBgn0038429.1.mrna1;Target=FBgn0038429.1 166 327 +
Chr2	stalkie_big_nohaplotig	exon	100583614	100583770	99	-	.	Parent=FBgn0038429.1.mrna1;Target=FBgn0038429.1 9 165 +
Chr2	stalkie_big_nohaplotig	CDS	100582165	100583295	.	-	0	Parent=FBgn0038429.1.mrna1;Target=FBgn0038429.1 328 1458 +
Chr2	stalkie_big_nohaplotig	CDS	100583363	100583524	.	-	0	Parent=FBgn0038429.1.mrna1;Target=FBgn0038429.1 166 327 +
Chr2	stalkie_big_nohaplotig	CDS	100583614	100583769	.	-	0	Parent=FBgn0038429.1.mrna1;Target=FBgn0038429.1 10 165 +
Chr2	gffcl	locus	100585151	100586046	.	+	.	ID=RLOC_00019973;geneIDs=FBgn0038428.1.path1;transcripts=FBgn0038428.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100585151	100586046	.	+	.	ID=FBgn0038428.1.mrna1;geneID=FBgn0038428.1.path1;Name=FBgn0038428.1;Dir=sensecoverage=100.0;identity=100.0;matches=843;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019973
Chr2	stalkie_big_nohaplotig	exon	100585151	100585707	100	+	.	Parent=FBgn0038428.1.mrna1;Target=FBgn0038428.1 1 557 +
Chr2	stalkie_big_nohaplotig	exon	100585761	100586046	100	+	.	Parent=FBgn0038428.1.mrna1;Target=FBgn0038428.1 558 843 +
Chr2	stalkie_big_nohaplotig	CDS	100585151	100585707	.	+	0	Parent=FBgn0038428.1.mrna1;Target=FBgn0038428.1 1 557 +
Chr2	stalkie_big_nohaplotig	CDS	100585761	100586046	.	+	1	Parent=FBgn0038428.1.mrna1;Target=FBgn0038428.1 558 843 +
Chr2	gffcl	locus	100593941	100608743	.	+	.	ID=RLOC_00019974;geneIDs=FBgn0037913.1.path1;transcripts=FBgn0037913.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100593941	100608743	.	+	.	ID=FBgn0037913.1.mrna1;geneID=FBgn0037913.1.path1;Name=FBgn0037913.1;Dir=sensecoverage=100.0;identity=100.0;matches=399;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019974
Chr2	stalkie_big_nohaplotig	exon	100593941	100594019	100	+	.	Parent=FBgn0037913.1.mrna1;Target=FBgn0037913.1 1 79 +
Chr2	stalkie_big_nohaplotig	exon	100608359	100608630	100	+	.	Parent=FBgn0037913.1.mrna1;Target=FBgn0037913.1 80 351 +
Chr2	stalkie_big_nohaplotig	exon	100608696	100608743	100	+	.	Parent=FBgn0037913.1.mrna1;Target=FBgn0037913.1 352 399 +
Chr2	stalkie_big_nohaplotig	CDS	100593941	100594019	.	+	0	Parent=FBgn0037913.1.mrna1;Target=FBgn0037913.1 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	100608359	100608630	.	+	2	Parent=FBgn0037913.1.mrna1;Target=FBgn0037913.1 80 351 +
Chr2	stalkie_big_nohaplotig	CDS	100608696	100608743	.	+	0	Parent=FBgn0037913.1.mrna1;Target=FBgn0037913.1 352 399 +
Chr2	gffcl	locus	100594211	100594587	.	-	.	ID=RLOC_00019975;geneIDs=comp152730_c0_seq1.path1;transcripts=comp152730_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100594211	100594587	.	-	.	ID=comp152730_c0_seq1.mrna1;geneID=comp152730_c0_seq1.path1;Name=comp152730_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=377;mismatches=0;indels=0;unknowns=0;Target=comp152730_c0_seq1 377 1 .;CDS_Target=comp152730_c0_seq1 278 234 .;locus=RLOC_00019975
Chr2	stalkie_big_nohaplotig	exon	100594211	100594587	100	-	.	Parent=comp152730_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	100594310	100594354	.	-	0	Parent=comp152730_c0_seq1.mrna1
Chr2	gffcl	locus	100612638	100615896	.	+	.	ID=RLOC_00019976;geneIDs=comp156838_c0_seq1.path1;transcripts=comp156838_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100612638	100615896	.	+	.	ID=comp156838_c0_seq1.mrna1;geneID=comp156838_c0_seq1.path1;Name=comp156838_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=1178;mismatches=2;indels=0;unknowns=0;locus=RLOC_00019976
Chr2	stalkie_big_nohaplotig	exon	100612638	100612684	95	+	.	Parent=comp156838_c0_seq1.mrna1;Target=comp156838_c0_seq1 1189 1235 -
Chr2	stalkie_big_nohaplotig	exon	100613438	100613467	100	+	.	Parent=comp156838_c0_seq1.mrna1;Target=comp156838_c0_seq1 1159 1188 -
Chr2	stalkie_big_nohaplotig	exon	100613474	100614253	100	+	.	Parent=comp156838_c0_seq1.mrna1;Target=comp156838_c0_seq1 324 1103 -
Chr2	stalkie_big_nohaplotig	exon	100615487	100615708	100	+	.	Parent=comp156838_c0_seq1.mrna1;Target=comp156838_c0_seq1 102 323 -
Chr2	stalkie_big_nohaplotig	exon	100615796	100615896	100	+	.	Parent=comp156838_c0_seq1.mrna1;Target=comp156838_c0_seq1 1 101 -
Chr2	stalkie_big_nohaplotig	CDS	100615513	100615708	.	+	0	Parent=comp156838_c0_seq1.mrna1;Target=comp156838_c0_seq1 102 297 .
Chr2	stalkie_big_nohaplotig	CDS	100615796	100615896	.	+	2	Parent=comp156838_c0_seq1.mrna1;Target=comp156838_c0_seq1 1 101 .
Chr2	gffcl	locus	100616646	100616943	.	+	.	ID=RLOC_00019977;geneIDs=comp135411_c0_seq1.path1;transcripts=comp135411_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100616646	100616943	.	+	.	ID=comp135411_c0_seq1.mrna1;geneID=comp135411_c0_seq1.path1;Name=comp135411_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=298;mismatches=0;indels=0;unknowns=0;Target=comp135411_c0_seq1 298 1 .;CDS_Target=comp135411_c0_seq1 158 3 .;locus=RLOC_00019977
Chr2	stalkie_big_nohaplotig	exon	100616646	100616943	100	+	.	Parent=comp135411_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	100616648	100616803	.	+	0	Parent=comp135411_c0_seq1.mrna1
Chr2	gffcl	locus	100623189	100623610	.	+	.	ID=RLOC_00019978;geneIDs=comp148304_c0_seq1.path1;transcripts=comp148304_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100623189	100623610	.	+	.	ID=comp148304_c0_seq1.mrna1;geneID=comp148304_c0_seq1.path1;Name=comp148304_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.5;matches=416;mismatches=6;indels=9;unknowns=0;Target=comp148304_c0_seq1 431 1 .;CDS_Target=comp148304_c0_seq1 159 1 .;locus=RLOC_00019978
Chr2	stalkie_big_nohaplotig	exon	100623189	100623610	96	+	.	Parent=comp148304_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	100623189	100623347	.	+	0	Parent=comp148304_c0_seq1.mrna1
Chr2	gffcl	locus	100625594	100626713	.	-	.	ID=RLOC_00019979;geneIDs=FBgn0037911.1.path1;transcripts=FBgn0037911.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100625594	100626713	.	-	.	ID=FBgn0037911.1.mrna1;geneID=FBgn0037911.1.path1;Name=FBgn0037911.1;Dir=sensecoverage=100.0;identity=100.0;matches=1050;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019979
Chr2	stalkie_big_nohaplotig	exon	100625594	100626360	100	-	.	Parent=FBgn0037911.1.mrna1;Target=FBgn0037911.1 284 1050 +
Chr2	stalkie_big_nohaplotig	exon	100626431	100626713	100	-	.	Parent=FBgn0037911.1.mrna1;Target=FBgn0037911.1 1 283 +
Chr2	stalkie_big_nohaplotig	CDS	100625594	100626360	.	-	2	Parent=FBgn0037911.1.mrna1;Target=FBgn0037911.1 284 1050 +
Chr2	stalkie_big_nohaplotig	CDS	100626431	100626713	.	-	0	Parent=FBgn0037911.1.mrna1;Target=FBgn0037911.1 1 283 +
Chr2	gffcl	locus	100638754	100643111	.	+	.	ID=RLOC_00019980;geneIDs=FBgn0003134.path1,FBgn0004103.path1;transcripts=FBgn0004103.mrna1,FBgn0003134.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100638754	100640059	.	+	.	ID=FBgn0004103.mrna1;geneID=FBgn0004103.path1;Name=FBgn0004103;Dir=sensecoverage=100.0;identity=100.0;matches=564;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019980
Chr2	stalkie_big_nohaplotig	exon	100638754	100638808	100	+	.	Parent=FBgn0004103.mrna1;Target=FBgn0004103 1 55 +
Chr2	stalkie_big_nohaplotig	exon	100639079	100639210	100	+	.	Parent=FBgn0004103.mrna1;Target=FBgn0004103 56 187 +
Chr2	stalkie_big_nohaplotig	exon	100639534	100639750	100	+	.	Parent=FBgn0004103.mrna1;Target=FBgn0004103 188 404 +
Chr2	stalkie_big_nohaplotig	exon	100639823	100639911	100	+	.	Parent=FBgn0004103.mrna1;Target=FBgn0004103 405 493 +
Chr2	stalkie_big_nohaplotig	exon	100639989	100640059	100	+	.	Parent=FBgn0004103.mrna1;Target=FBgn0004103 494 564 +
Chr2	stalkie_big_nohaplotig	CDS	100638754	100638808	.	+	0	Parent=FBgn0004103.mrna1;Target=FBgn0004103 1 55 +
Chr2	stalkie_big_nohaplotig	CDS	100639079	100639210	.	+	2	Parent=FBgn0004103.mrna1;Target=FBgn0004103 56 187 +
Chr2	stalkie_big_nohaplotig	CDS	100639534	100639750	.	+	2	Parent=FBgn0004103.mrna1;Target=FBgn0004103 188 404 +
Chr2	stalkie_big_nohaplotig	CDS	100639823	100639911	.	+	1	Parent=FBgn0004103.mrna1;Target=FBgn0004103 405 493 +
Chr2	stalkie_big_nohaplotig	CDS	100639989	100640059	.	+	2	Parent=FBgn0004103.mrna1;Target=FBgn0004103 494 564 +
Chr2	stalkie_big_nohaplotig	mRNA	100640045	100643111	.	+	.	ID=FBgn0003134.mrna1;geneID=FBgn0003134.path1;Name=FBgn0003134;Dir=sensecoverage=100.0;identity=100.0;matches=438;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019980
Chr2	stalkie_big_nohaplotig	exon	100640045	100640185	100	+	.	Parent=FBgn0003134.mrna1;Target=FBgn0003134 1 141 +
Chr2	stalkie_big_nohaplotig	exon	100642744	100642891	100	+	.	Parent=FBgn0003134.mrna1;Target=FBgn0003134 142 289 +
Chr2	stalkie_big_nohaplotig	exon	100642963	100643111	100	+	.	Parent=FBgn0003134.mrna1;Target=FBgn0003134 290 438 +
Chr2	stalkie_big_nohaplotig	CDS	100640045	100640185	.	+	0	Parent=FBgn0003134.mrna1;Target=FBgn0003134 1 141 +
Chr2	stalkie_big_nohaplotig	CDS	100642744	100642891	.	+	0	Parent=FBgn0003134.mrna1;Target=FBgn0003134 142 289 +
Chr2	stalkie_big_nohaplotig	CDS	100642963	100643111	.	+	2	Parent=FBgn0003134.mrna1;Target=FBgn0003134 290 438 +
Chr2	gffcl	locus	100646545	100647905	.	+	.	ID=RLOC_00019981;geneIDs=ORF886.path1;transcripts=ORF886.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100646545	100647905	.	+	.	ID=ORF886.mrna1;geneID=ORF886.path1;Name=ORF886;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1361;mismatches=0;indels=1;unknowns=0;Target=ORF886 1362 1 .;CDS_Target=ORF886 95 3 .;locus=RLOC_00019981
Chr2	stalkie_big_nohaplotig	exon	100646545	100647905	99	+	.	Parent=ORF886.mrna1
Chr2	stalkie_big_nohaplotig	CDS	100646547	100646638	.	+	0	Parent=ORF886.mrna1
Chr2	gffcl	locus	100654159	100660192	.	+	.	ID=RLOC_00019982;geneIDs=FBgn0039203.1.path1;transcripts=FBgn0039203.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100654159	100660192	.	+	.	ID=FBgn0039203.1.mrna1;geneID=FBgn0039203.1.path1;Name=FBgn0039203.1;Dir=sensecoverage=100.0;identity=100.0;matches=783;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019982
Chr2	stalkie_big_nohaplotig	exon	100654159	100654270	100	+	.	Parent=FBgn0039203.1.mrna1;Target=FBgn0039203.1 1 112 +
Chr2	stalkie_big_nohaplotig	exon	100659312	100659401	100	+	.	Parent=FBgn0039203.1.mrna1;Target=FBgn0039203.1 113 202 +
Chr2	stalkie_big_nohaplotig	exon	100659531	100659681	100	+	.	Parent=FBgn0039203.1.mrna1;Target=FBgn0039203.1 203 353 +
Chr2	stalkie_big_nohaplotig	exon	100659763	100660192	100	+	.	Parent=FBgn0039203.1.mrna1;Target=FBgn0039203.1 354 783 +
Chr2	stalkie_big_nohaplotig	CDS	100654159	100654270	.	+	0	Parent=FBgn0039203.1.mrna1;Target=FBgn0039203.1 1 112 +
Chr2	stalkie_big_nohaplotig	CDS	100659312	100659401	.	+	2	Parent=FBgn0039203.1.mrna1;Target=FBgn0039203.1 113 202 +
Chr2	stalkie_big_nohaplotig	CDS	100659531	100659681	.	+	2	Parent=FBgn0039203.1.mrna1;Target=FBgn0039203.1 203 353 +
Chr2	stalkie_big_nohaplotig	CDS	100659763	100660192	.	+	1	Parent=FBgn0039203.1.mrna1;Target=FBgn0039203.1 354 783 +
Chr2	gffcl	locus	100674416	100677685	.	+	.	ID=RLOC_00019983;geneIDs=comp75350_c0_seq1.path1;transcripts=comp75350_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100674416	100677685	.	+	.	ID=comp75350_c0_seq1.mrna1;geneID=comp75350_c0_seq1.path1;Name=comp75350_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=678;mismatches=1;indels=0;unknowns=0;Target=comp75350_c0_seq1 179 355 +;locus=RLOC_00019983
Chr2	stalkie_big_nohaplotig	exon	100674416	100675071	99	+	.	Parent=comp75350_c0_seq1.mrna1;Target=comp75350_c0_seq1 1 656 +
Chr2	stalkie_big_nohaplotig	exon	100677663	100677685	100	+	.	Parent=comp75350_c0_seq1.mrna1;Target=comp75350_c0_seq1 657 679 +
Chr2	stalkie_big_nohaplotig	CDS	100674594	100674770	.	+	0	Parent=comp75350_c0_seq1.mrna1
Chr2	gffcl	locus	100695840	100697241	.	-	.	ID=RLOC_00019984;geneIDs=FBgn0038398.1.path1;transcripts=FBgn0038398.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100695840	100697241	.	-	.	ID=FBgn0038398.1.mrna1;geneID=FBgn0038398.1.path1;Name=FBgn0038398.1;Dir=sensecoverage=100.0;identity=100.0;matches=1257;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019984
Chr2	stalkie_big_nohaplotig	exon	100695840	100696776	100	-	.	Parent=FBgn0038398.1.mrna1;Target=FBgn0038398.1 321 1257 +
Chr2	stalkie_big_nohaplotig	exon	100696841	100697087	100	-	.	Parent=FBgn0038398.1.mrna1;Target=FBgn0038398.1 74 320 +
Chr2	stalkie_big_nohaplotig	exon	100697169	100697241	100	-	.	Parent=FBgn0038398.1.mrna1;Target=FBgn0038398.1 1 73 +
Chr2	stalkie_big_nohaplotig	CDS	100695840	100696776	.	-	1	Parent=FBgn0038398.1.mrna1;Target=FBgn0038398.1 321 1257 +
Chr2	stalkie_big_nohaplotig	CDS	100696841	100697087	.	-	2	Parent=FBgn0038398.1.mrna1;Target=FBgn0038398.1 74 320 +
Chr2	stalkie_big_nohaplotig	CDS	100697169	100697241	.	-	0	Parent=FBgn0038398.1.mrna1;Target=FBgn0038398.1 1 73 +
Chr2	gffcl	locus	100736082	100751603	.	+	.	ID=RLOC_00019985;geneIDs=FBgn0026059.1.path1;transcripts=FBgn0026059.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100736082	100751603	.	+	.	ID=FBgn0026059.1.mrna1;geneID=FBgn0026059.1.path1;Name=FBgn0026059.1;Dir=sensecoverage=100.0;identity=100.0;matches=3933;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019985
Chr2	stalkie_big_nohaplotig	exon	100736082	100737701	100	+	.	Parent=FBgn0026059.1.mrna1;Target=FBgn0026059.1 1 1620 +
Chr2	stalkie_big_nohaplotig	exon	100739578	100739952	100	+	.	Parent=FBgn0026059.1.mrna1;Target=FBgn0026059.1 1621 1995 +
Chr2	stalkie_big_nohaplotig	exon	100740028	100740210	100	+	.	Parent=FBgn0026059.1.mrna1;Target=FBgn0026059.1 1996 2178 +
Chr2	stalkie_big_nohaplotig	exon	100740791	100740886	100	+	.	Parent=FBgn0026059.1.mrna1;Target=FBgn0026059.1 2179 2274 +
Chr2	stalkie_big_nohaplotig	exon	100749033	100749348	100	+	.	Parent=FBgn0026059.1.mrna1;Target=FBgn0026059.1 2275 2590 +
Chr2	stalkie_big_nohaplotig	exon	100749411	100750053	100	+	.	Parent=FBgn0026059.1.mrna1;Target=FBgn0026059.1 2591 3233 +
Chr2	stalkie_big_nohaplotig	exon	100750490	100750870	100	+	.	Parent=FBgn0026059.1.mrna1;Target=FBgn0026059.1 3234 3614 +
Chr2	stalkie_big_nohaplotig	exon	100750935	100751090	100	+	.	Parent=FBgn0026059.1.mrna1;Target=FBgn0026059.1 3615 3770 +
Chr2	stalkie_big_nohaplotig	exon	100751441	100751603	100	+	.	Parent=FBgn0026059.1.mrna1;Target=FBgn0026059.1 3771 3933 +
Chr2	stalkie_big_nohaplotig	CDS	100736082	100737701	.	+	0	Parent=FBgn0026059.1.mrna1;Target=FBgn0026059.1 1 1620 +
Chr2	stalkie_big_nohaplotig	CDS	100739578	100739952	.	+	0	Parent=FBgn0026059.1.mrna1;Target=FBgn0026059.1 1621 1995 +
Chr2	stalkie_big_nohaplotig	CDS	100740028	100740210	.	+	0	Parent=FBgn0026059.1.mrna1;Target=FBgn0026059.1 1996 2178 +
Chr2	stalkie_big_nohaplotig	CDS	100740791	100740886	.	+	0	Parent=FBgn0026059.1.mrna1;Target=FBgn0026059.1 2179 2274 +
Chr2	stalkie_big_nohaplotig	CDS	100749033	100749348	.	+	0	Parent=FBgn0026059.1.mrna1;Target=FBgn0026059.1 2275 2590 +
Chr2	stalkie_big_nohaplotig	CDS	100749411	100750053	.	+	2	Parent=FBgn0026059.1.mrna1;Target=FBgn0026059.1 2591 3233 +
Chr2	stalkie_big_nohaplotig	CDS	100750490	100750870	.	+	1	Parent=FBgn0026059.1.mrna1;Target=FBgn0026059.1 3234 3614 +
Chr2	stalkie_big_nohaplotig	CDS	100750935	100751090	.	+	1	Parent=FBgn0026059.1.mrna1;Target=FBgn0026059.1 3615 3770 +
Chr2	stalkie_big_nohaplotig	CDS	100751441	100751603	.	+	1	Parent=FBgn0026059.1.mrna1;Target=FBgn0026059.1 3771 3933 +
Chr2	gffcl	locus	100764028	100769719	.	+	.	ID=RLOC_00019987;geneIDs=FBgn0038397.1.path1;transcripts=FBgn0038397.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100764028	100769719	.	+	.	ID=FBgn0038397.1.mrna1;geneID=FBgn0038397.1.path1;Name=FBgn0038397.1;Dir=sensecoverage=100.0;identity=100.0;matches=3876;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019987
Chr2	stalkie_big_nohaplotig	exon	100764028	100764258	100	+	.	Parent=FBgn0038397.1.mrna1;Target=FBgn0038397.1 1 231 +
Chr2	stalkie_big_nohaplotig	exon	100764606	100765454	100	+	.	Parent=FBgn0038397.1.mrna1;Target=FBgn0038397.1 232 1080 +
Chr2	stalkie_big_nohaplotig	exon	100765525	100765917	100	+	.	Parent=FBgn0038397.1.mrna1;Target=FBgn0038397.1 1081 1473 +
Chr2	stalkie_big_nohaplotig	exon	100766038	100766351	100	+	.	Parent=FBgn0038397.1.mrna1;Target=FBgn0038397.1 1474 1787 +
Chr2	stalkie_big_nohaplotig	exon	100766411	100766514	100	+	.	Parent=FBgn0038397.1.mrna1;Target=FBgn0038397.1 1788 1891 +
Chr2	stalkie_big_nohaplotig	exon	100766574	100766761	100	+	.	Parent=FBgn0038397.1.mrna1;Target=FBgn0038397.1 1892 2079 +
Chr2	stalkie_big_nohaplotig	exon	100766858	100767393	100	+	.	Parent=FBgn0038397.1.mrna1;Target=FBgn0038397.1 2080 2615 +
Chr2	stalkie_big_nohaplotig	exon	100767507	100767871	100	+	.	Parent=FBgn0038397.1.mrna1;Target=FBgn0038397.1 2616 2980 +
Chr2	stalkie_big_nohaplotig	exon	100767937	100768136	100	+	.	Parent=FBgn0038397.1.mrna1;Target=FBgn0038397.1 2981 3180 +
Chr2	stalkie_big_nohaplotig	exon	100768212	100768381	100	+	.	Parent=FBgn0038397.1.mrna1;Target=FBgn0038397.1 3181 3350 +
Chr2	stalkie_big_nohaplotig	exon	100769194	100769719	100	+	.	Parent=FBgn0038397.1.mrna1;Target=FBgn0038397.1 3351 3876 +
Chr2	stalkie_big_nohaplotig	CDS	100764028	100764258	.	+	0	Parent=FBgn0038397.1.mrna1;Target=FBgn0038397.1 1 231 +
Chr2	stalkie_big_nohaplotig	CDS	100764606	100765454	.	+	0	Parent=FBgn0038397.1.mrna1;Target=FBgn0038397.1 232 1080 +
Chr2	stalkie_big_nohaplotig	CDS	100765525	100765917	.	+	0	Parent=FBgn0038397.1.mrna1;Target=FBgn0038397.1 1081 1473 +
Chr2	stalkie_big_nohaplotig	CDS	100766038	100766351	.	+	0	Parent=FBgn0038397.1.mrna1;Target=FBgn0038397.1 1474 1787 +
Chr2	stalkie_big_nohaplotig	CDS	100766411	100766514	.	+	1	Parent=FBgn0038397.1.mrna1;Target=FBgn0038397.1 1788 1891 +
Chr2	stalkie_big_nohaplotig	CDS	100766574	100766761	.	+	2	Parent=FBgn0038397.1.mrna1;Target=FBgn0038397.1 1892 2079 +
Chr2	stalkie_big_nohaplotig	CDS	100766858	100767393	.	+	0	Parent=FBgn0038397.1.mrna1;Target=FBgn0038397.1 2080 2615 +
Chr2	stalkie_big_nohaplotig	CDS	100767507	100767871	.	+	1	Parent=FBgn0038397.1.mrna1;Target=FBgn0038397.1 2616 2980 +
Chr2	stalkie_big_nohaplotig	CDS	100767937	100768136	.	+	2	Parent=FBgn0038397.1.mrna1;Target=FBgn0038397.1 2981 3180 +
Chr2	stalkie_big_nohaplotig	CDS	100768212	100768381	.	+	0	Parent=FBgn0038397.1.mrna1;Target=FBgn0038397.1 3181 3350 +
Chr2	stalkie_big_nohaplotig	CDS	100769194	100769719	.	+	1	Parent=FBgn0038397.1.mrna1;Target=FBgn0038397.1 3351 3876 +
Chr2	gffcl	locus	100807713	100811281	.	+	.	ID=RLOC_00019988;geneIDs=FBgn0010379.1.path1;transcripts=FBgn0010379.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100807713	100811281	.	+	.	ID=FBgn0010379.1.mrna1;geneID=FBgn0010379.1.path1;Name=FBgn0010379.1;Dir=sensecoverage=100.0;identity=100.0;matches=1857;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019988
Chr2	stalkie_big_nohaplotig	exon	100807713	100808522	100	+	.	Parent=FBgn0010379.1.mrna1;Target=FBgn0010379.1 1 810 +
Chr2	stalkie_big_nohaplotig	exon	100808583	100808780	100	+	.	Parent=FBgn0010379.1.mrna1;Target=FBgn0010379.1 811 1008 +
Chr2	stalkie_big_nohaplotig	exon	100808857	100809246	100	+	.	Parent=FBgn0010379.1.mrna1;Target=FBgn0010379.1 1009 1398 +
Chr2	stalkie_big_nohaplotig	exon	100809320	100809553	100	+	.	Parent=FBgn0010379.1.mrna1;Target=FBgn0010379.1 1399 1632 +
Chr2	stalkie_big_nohaplotig	exon	100809619	100809765	100	+	.	Parent=FBgn0010379.1.mrna1;Target=FBgn0010379.1 1633 1779 +
Chr2	stalkie_big_nohaplotig	exon	100811204	100811281	100	+	.	Parent=FBgn0010379.1.mrna1;Target=FBgn0010379.1 1780 1857 +
Chr2	stalkie_big_nohaplotig	CDS	100807713	100808522	.	+	0	Parent=FBgn0010379.1.mrna1;Target=FBgn0010379.1 1 810 +
Chr2	stalkie_big_nohaplotig	CDS	100808583	100808780	.	+	0	Parent=FBgn0010379.1.mrna1;Target=FBgn0010379.1 811 1008 +
Chr2	stalkie_big_nohaplotig	CDS	100808857	100809246	.	+	0	Parent=FBgn0010379.1.mrna1;Target=FBgn0010379.1 1009 1398 +
Chr2	stalkie_big_nohaplotig	CDS	100809320	100809553	.	+	0	Parent=FBgn0010379.1.mrna1;Target=FBgn0010379.1 1399 1632 +
Chr2	stalkie_big_nohaplotig	CDS	100809619	100809765	.	+	0	Parent=FBgn0010379.1.mrna1;Target=FBgn0010379.1 1633 1779 +
Chr2	stalkie_big_nohaplotig	CDS	100811204	100811281	.	+	0	Parent=FBgn0010379.1.mrna1;Target=FBgn0010379.1 1780 1857 +
Chr2	gffcl	locus	100812741	100830237	.	-	.	ID=RLOC_00019989;geneIDs=comp161341_c2_seq1.path1;transcripts=comp161341_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100812741	100830237	.	-	.	ID=comp161341_c2_seq1.mrna1;geneID=comp161341_c2_seq1.path1;Name=comp161341_c2_seq1;Dir=indeterminatecoverage=39.3;identity=100.0;matches=2568;mismatches=0;indels=1;unknowns=0;Target=comp161341_c2_seq1 4590 4441 .;locus=RLOC_00019989
Chr2	stalkie_big_nohaplotig	exon	100812741	100815285	99	-	.	Parent=comp161341_c2_seq1.mrna1;Target=comp161341_c2_seq1 5801 3256 .
Chr2	stalkie_big_nohaplotig	exon	100816313	100816318	100	-	.	Parent=comp161341_c2_seq1.mrna1;Target=comp161341_c2_seq1 3255 3250 .
Chr2	stalkie_big_nohaplotig	exon	100818841	100818849	100	-	.	Parent=comp161341_c2_seq1.mrna1;Target=comp161341_c2_seq1 3249 3241 .
Chr2	stalkie_big_nohaplotig	exon	100826666	100826667	100	-	.	Parent=comp161341_c2_seq1.mrna1;Target=comp161341_c2_seq1 3240 3239 .
Chr2	stalkie_big_nohaplotig	exon	100830232	100830237	100	-	.	Parent=comp161341_c2_seq1.mrna1;Target=comp161341_c2_seq1 3238 3233 .
Chr2	stalkie_big_nohaplotig	CDS	100813952	100814101	.	-	0	Parent=comp161341_c2_seq1.mrna1
Chr2	gffcl	locus	100817862	100818156	.	+	.	ID=RLOC_00019990;geneIDs=comp100141_c0_seq1.path1;transcripts=comp100141_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100817862	100818156	.	+	.	ID=comp100141_c0_seq1.mrna1;geneID=comp100141_c0_seq1.path1;Name=comp100141_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=295;mismatches=0;indels=0;unknowns=0;Target=comp100141_c0_seq1 295 1 .;CDS_Target=comp100141_c0_seq1 67 2 .;locus=RLOC_00019990
Chr2	stalkie_big_nohaplotig	exon	100817862	100818156	100	+	.	Parent=comp100141_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	100817863	100817928	.	+	0	Parent=comp100141_c0_seq1.mrna1
Chr2	gffcl	locus	100818240	100819121	.	-	.	ID=RLOC_00019991;geneIDs=FBgn0039802.1.path1;transcripts=FBgn0039802.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100818240	100819121	.	-	.	ID=FBgn0039802.1.mrna1;geneID=FBgn0039802.1.path1;Name=FBgn0039802.1;Dir=sensecoverage=100.0;identity=100.0;matches=681;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019991
Chr2	stalkie_big_nohaplotig	exon	100818240	100818387	100	-	.	Parent=FBgn0039802.1.mrna1;Target=FBgn0039802.1 534 681 +
Chr2	stalkie_big_nohaplotig	exon	100818448	100818640	100	-	.	Parent=FBgn0039802.1.mrna1;Target=FBgn0039802.1 341 533 +
Chr2	stalkie_big_nohaplotig	exon	100818708	100818834	100	-	.	Parent=FBgn0039802.1.mrna1;Target=FBgn0039802.1 214 340 +
Chr2	stalkie_big_nohaplotig	exon	100818909	100819121	100	-	.	Parent=FBgn0039802.1.mrna1;Target=FBgn0039802.1 1 213 +
Chr2	stalkie_big_nohaplotig	CDS	100818240	100818387	.	-	1	Parent=FBgn0039802.1.mrna1;Target=FBgn0039802.1 534 681 +
Chr2	stalkie_big_nohaplotig	CDS	100818448	100818640	.	-	2	Parent=FBgn0039802.1.mrna1;Target=FBgn0039802.1 341 533 +
Chr2	stalkie_big_nohaplotig	CDS	100818708	100818834	.	-	0	Parent=FBgn0039802.1.mrna1;Target=FBgn0039802.1 214 340 +
Chr2	stalkie_big_nohaplotig	CDS	100818909	100819121	.	-	0	Parent=FBgn0039802.1.mrna1;Target=FBgn0039802.1 1 213 +
Chr2	gffcl	locus	100935244	100938778	.	+	.	ID=RLOC_00019992;geneIDs=FBgn0003319.1.path1;transcripts=FBgn0003319.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100935244	100938778	.	+	.	ID=FBgn0003319.1.mrna1;geneID=FBgn0003319.1.path1;Name=FBgn0003319.1;Dir=sensecoverage=100.0;identity=100.0;matches=1716;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019992
Chr2	stalkie_big_nohaplotig	exon	100935244	100936058	100	+	.	Parent=FBgn0003319.1.mrna1;Target=FBgn0003319.1 1 815 +
Chr2	stalkie_big_nohaplotig	exon	100936755	100936963	100	+	.	Parent=FBgn0003319.1.mrna1;Target=FBgn0003319.1 816 1024 +
Chr2	stalkie_big_nohaplotig	exon	100937673	100937905	100	+	.	Parent=FBgn0003319.1.mrna1;Target=FBgn0003319.1 1025 1257 +
Chr2	stalkie_big_nohaplotig	exon	100938320	100938778	100	+	.	Parent=FBgn0003319.1.mrna1;Target=FBgn0003319.1 1258 1716 +
Chr2	stalkie_big_nohaplotig	CDS	100935244	100936058	.	+	0	Parent=FBgn0003319.1.mrna1;Target=FBgn0003319.1 1 815 +
Chr2	stalkie_big_nohaplotig	CDS	100936755	100936963	.	+	1	Parent=FBgn0003319.1.mrna1;Target=FBgn0003319.1 816 1024 +
Chr2	stalkie_big_nohaplotig	CDS	100937673	100937905	.	+	2	Parent=FBgn0003319.1.mrna1;Target=FBgn0003319.1 1025 1257 +
Chr2	stalkie_big_nohaplotig	CDS	100938320	100938778	.	+	0	Parent=FBgn0003319.1.mrna1;Target=FBgn0003319.1 1258 1716 +
Chr2	gffcl	locus	100951769	100952605	.	-	.	ID=RLOC_00019993;geneIDs=FBgn0038400.1.path1;transcripts=FBgn0038400.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100951769	100952605	.	-	.	ID=FBgn0038400.1.mrna1;geneID=FBgn0038400.1.path1;Name=FBgn0038400.1;Dir=sensecoverage=100.0;identity=100.0;matches=705;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019993
Chr2	stalkie_big_nohaplotig	exon	100951769	100952023	100	-	.	Parent=FBgn0038400.1.mrna1;Target=FBgn0038400.1 451 705 +
Chr2	stalkie_big_nohaplotig	exon	100952087	100952357	100	-	.	Parent=FBgn0038400.1.mrna1;Target=FBgn0038400.1 180 450 +
Chr2	stalkie_big_nohaplotig	exon	100952427	100952605	100	-	.	Parent=FBgn0038400.1.mrna1;Target=FBgn0038400.1 1 179 +
Chr2	stalkie_big_nohaplotig	CDS	100951769	100952023	.	-	0	Parent=FBgn0038400.1.mrna1;Target=FBgn0038400.1 451 705 +
Chr2	stalkie_big_nohaplotig	CDS	100952087	100952357	.	-	1	Parent=FBgn0038400.1.mrna1;Target=FBgn0038400.1 180 450 +
Chr2	stalkie_big_nohaplotig	CDS	100952427	100952605	.	-	0	Parent=FBgn0038400.1.mrna1;Target=FBgn0038400.1 1 179 +
Chr2	gffcl	locus	100955454	100963791	.	+	.	ID=RLOC_00019994;geneIDs=FBgn0038401.1.path1;transcripts=FBgn0038401.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100955454	100963791	.	+	.	ID=FBgn0038401.1.mrna1;geneID=FBgn0038401.1.path1;Name=FBgn0038401.1;Dir=sensecoverage=100.0;identity=100.0;matches=1017;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019994
Chr2	stalkie_big_nohaplotig	exon	100955454	100955509	100	+	.	Parent=FBgn0038401.1.mrna1;Target=FBgn0038401.1 1 56 +
Chr2	stalkie_big_nohaplotig	exon	100960393	100960580	100	+	.	Parent=FBgn0038401.1.mrna1;Target=FBgn0038401.1 57 244 +
Chr2	stalkie_big_nohaplotig	exon	100961165	100961422	100	+	.	Parent=FBgn0038401.1.mrna1;Target=FBgn0038401.1 245 502 +
Chr2	stalkie_big_nohaplotig	exon	100963140	100963322	100	+	.	Parent=FBgn0038401.1.mrna1;Target=FBgn0038401.1 503 685 +
Chr2	stalkie_big_nohaplotig	exon	100963392	100963504	100	+	.	Parent=FBgn0038401.1.mrna1;Target=FBgn0038401.1 686 798 +
Chr2	stalkie_big_nohaplotig	exon	100963573	100963791	100	+	.	Parent=FBgn0038401.1.mrna1;Target=FBgn0038401.1 799 1017 +
Chr2	stalkie_big_nohaplotig	CDS	100955454	100955509	.	+	0	Parent=FBgn0038401.1.mrna1;Target=FBgn0038401.1 1 56 +
Chr2	stalkie_big_nohaplotig	CDS	100960393	100960580	.	+	1	Parent=FBgn0038401.1.mrna1;Target=FBgn0038401.1 57 244 +
Chr2	stalkie_big_nohaplotig	CDS	100961165	100961422	.	+	2	Parent=FBgn0038401.1.mrna1;Target=FBgn0038401.1 245 502 +
Chr2	stalkie_big_nohaplotig	CDS	100963140	100963322	.	+	2	Parent=FBgn0038401.1.mrna1;Target=FBgn0038401.1 503 685 +
Chr2	stalkie_big_nohaplotig	CDS	100963392	100963504	.	+	2	Parent=FBgn0038401.1.mrna1;Target=FBgn0038401.1 686 798 +
Chr2	stalkie_big_nohaplotig	CDS	100963573	100963791	.	+	0	Parent=FBgn0038401.1.mrna1;Target=FBgn0038401.1 799 1017 +
Chr2	gffcl	locus	100965717	100968553	.	-	.	ID=RLOC_00019995;geneIDs=FBgn0038402.1.path1;transcripts=FBgn0038402.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	100965717	100968553	.	-	.	ID=FBgn0038402.1.mrna1;geneID=FBgn0038402.1.path1;Name=FBgn0038402.1;Dir=sensecoverage=95.1;identity=100.0;matches=679;mismatches=0;indels=0;unknowns=0;locus=RLOC_00019995
Chr2	stalkie_big_nohaplotig	exon	100965717	100965841	100	-	.	Parent=FBgn0038402.1.mrna1;Target=FBgn0038402.1 590 714 +
Chr2	stalkie_big_nohaplotig	exon	100967715	100967926	100	-	.	Parent=FBgn0038402.1.mrna1;Target=FBgn0038402.1 378 589 +
Chr2	stalkie_big_nohaplotig	exon	100968152	100968326	100	-	.	Parent=FBgn0038402.1.mrna1;Target=FBgn0038402.1 203 377 +
Chr2	stalkie_big_nohaplotig	exon	100968387	100968553	100	-	.	Parent=FBgn0038402.1.mrna1;Target=FBgn0038402.1 36 202 +
Chr2	stalkie_big_nohaplotig	CDS	100965717	100965841	.	-	2	Parent=FBgn0038402.1.mrna1;Target=FBgn0038402.1 590 714 +
Chr2	stalkie_big_nohaplotig	CDS	100967715	100967926	.	-	1	Parent=FBgn0038402.1.mrna1;Target=FBgn0038402.1 378 589 +
Chr2	stalkie_big_nohaplotig	CDS	100968152	100968326	.	-	2	Parent=FBgn0038402.1.mrna1;Target=FBgn0038402.1 203 377 +
Chr2	stalkie_big_nohaplotig	CDS	100968387	100968552	.	-	0	Parent=FBgn0038402.1.mrna1;Target=FBgn0038402.1 37 202 +
Chr2	gffcl	locus	101042768	101043909	.	-	.	ID=RLOC_00019997;geneIDs=comp157006_c1_seq1.path1;transcripts=comp157006_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101042768	101043909	.	-	.	ID=comp157006_c1_seq1.mrna1;geneID=comp157006_c1_seq1.path1;Name=comp157006_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1142;mismatches=0;indels=0;unknowns=0;Target=comp157006_c1_seq1 1142 1 .;CDS_Target=comp157006_c1_seq1 808 662 .;locus=RLOC_00019997
Chr2	stalkie_big_nohaplotig	exon	101042768	101043909	100	-	.	Parent=comp157006_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101043102	101043248	.	-	0	Parent=comp157006_c1_seq1.mrna1
Chr2	gffcl	locus	101044694	101045278	.	+	.	ID=RLOC_00019998;geneIDs=comp118150_c0_seq1.path1;transcripts=comp118150_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101044694	101045278	.	+	.	ID=comp118150_c0_seq1.mrna1;geneID=comp118150_c0_seq1.path1;Name=comp118150_c0_seq1;Dir=indeterminatecoverage=97.5;identity=99.5;matches=582;mismatches=3;indels=0;unknowns=0;Target=comp118150_c0_seq1 600 16 .;CDS_Target=comp118150_c0_seq1 93 16 .;locus=RLOC_00019998
Chr2	stalkie_big_nohaplotig	exon	101044694	101045278	99	+	.	Parent=comp118150_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101044694	101044771	.	+	0	Parent=comp118150_c0_seq1.mrna1
Chr2	gffcl	locus	101048461	101087487	.	+	.	ID=RLOC_00019999;geneIDs=FBgn0038404.1.path1;transcripts=FBgn0038404.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101048461	101087487	.	+	.	ID=FBgn0038404.1.mrna1;geneID=FBgn0038404.1.path1;Name=FBgn0038404.1;Dir=sensecoverage=100.0;identity=99.9;matches=1673;mismatches=0;indels=1;unknowns=0;Target=FBgn0038404.1 3 71 +;locus=RLOC_00019999
Chr2	stalkie_big_nohaplotig	exon	101048461	101048657	99	+	.	Parent=FBgn0038404.1.mrna1;Target=FBgn0038404.1 1 198 +
Chr2	stalkie_big_nohaplotig	exon	101077248	101077635	100	+	.	Parent=FBgn0038404.1.mrna1;Target=FBgn0038404.1 199 586 +
Chr2	stalkie_big_nohaplotig	exon	101081805	101082072	100	+	.	Parent=FBgn0038404.1.mrna1;Target=FBgn0038404.1 587 854 +
Chr2	stalkie_big_nohaplotig	exon	101086242	101086641	100	+	.	Parent=FBgn0038404.1.mrna1;Target=FBgn0038404.1 855 1254 +
Chr2	stalkie_big_nohaplotig	exon	101086910	101087090	100	+	.	Parent=FBgn0038404.1.mrna1;Target=FBgn0038404.1 1255 1435 +
Chr2	stalkie_big_nohaplotig	exon	101087177	101087322	100	+	.	Parent=FBgn0038404.1.mrna1;Target=FBgn0038404.1 1436 1581 +
Chr2	stalkie_big_nohaplotig	exon	101087395	101087487	100	+	.	Parent=FBgn0038404.1.mrna1;Target=FBgn0038404.1 1582 1674 +
Chr2	stalkie_big_nohaplotig	CDS	101048463	101048530	.	+	0	Parent=FBgn0038404.1.mrna1
Chr2	gffcl	locus	101112807	101113940	.	+	.	ID=RLOC_00020000;geneIDs=FBgn0038405.1.path1;transcripts=FBgn0038405.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101112807	101113940	.	+	.	ID=FBgn0038405.1.mrna1;geneID=FBgn0038405.1.path1;Name=FBgn0038405.1;Dir=sensecoverage=96.5;identity=100.0;matches=1080;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020000
Chr2	stalkie_big_nohaplotig	exon	101112807	101113666	100	+	.	Parent=FBgn0038405.1.mrna1;Target=FBgn0038405.1 40 899 +
Chr2	stalkie_big_nohaplotig	exon	101113721	101113940	100	+	.	Parent=FBgn0038405.1.mrna1;Target=FBgn0038405.1 900 1119 +
Chr2	stalkie_big_nohaplotig	CDS	101112807	101113666	.	+	0	Parent=FBgn0038405.1.mrna1;Target=FBgn0038405.1 40 899 +
Chr2	stalkie_big_nohaplotig	CDS	101113721	101113940	.	+	1	Parent=FBgn0038405.1.mrna1;Target=FBgn0038405.1 900 1119 +
Chr2	gffcl	locus	101114139	101114713	.	-	.	ID=RLOC_00020001;geneIDs=FBgn0024491.1.path1;transcripts=FBgn0024491.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101114139	101114713	.	-	.	ID=FBgn0024491.1.mrna1;geneID=FBgn0024491.1.path1;Name=FBgn0024491.1;Dir=sensecoverage=100.0;identity=100.0;matches=462;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020001
Chr2	stalkie_big_nohaplotig	exon	101114139	101114519	100	-	.	Parent=FBgn0024491.1.mrna1;Target=FBgn0024491.1 82 462 +
Chr2	stalkie_big_nohaplotig	exon	101114633	101114713	100	-	.	Parent=FBgn0024491.1.mrna1;Target=FBgn0024491.1 1 81 +
Chr2	stalkie_big_nohaplotig	CDS	101114139	101114519	.	-	0	Parent=FBgn0024491.1.mrna1;Target=FBgn0024491.1 82 462 +
Chr2	stalkie_big_nohaplotig	CDS	101114633	101114713	.	-	0	Parent=FBgn0024491.1.mrna1;Target=FBgn0024491.1 1 81 +
Chr2	gffcl	locus	101147804	101148267	.	-	.	ID=RLOC_00020003;geneIDs=comp112876_c1_seq1.path1;transcripts=comp112876_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101147804	101148267	.	-	.	ID=comp112876_c1_seq1.mrna1;geneID=comp112876_c1_seq1.path1;Name=comp112876_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=464;mismatches=0;indels=0;unknowns=0;Target=comp112876_c1_seq1 464 1 .;CDS_Target=comp112876_c1_seq1 111 1 .;locus=RLOC_00020003
Chr2	stalkie_big_nohaplotig	exon	101147804	101148267	100	-	.	Parent=comp112876_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101148157	101148267	.	-	0	Parent=comp112876_c1_seq1.mrna1
Chr2	gffcl	locus	101152335	101180157	.	-	.	ID=RLOC_00020004;geneIDs=FBgn0038407.1.path1;transcripts=FBgn0038407.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101152335	101180157	.	-	.	ID=FBgn0038407.1.mrna1;geneID=FBgn0038407.1.path1;Name=FBgn0038407.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1656;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020004
Chr2	stalkie_big_nohaplotig	exon	101152335	101153321	100	-	.	Parent=FBgn0038407.1.mrna1;Target=FBgn0038407.1 1656 670 .
Chr2	stalkie_big_nohaplotig	exon	101153381	101154003	100	-	.	Parent=FBgn0038407.1.mrna1;Target=FBgn0038407.1 669 47 .
Chr2	stalkie_big_nohaplotig	exon	101180112	101180157	100	-	.	Parent=FBgn0038407.1.mrna1;Target=FBgn0038407.1 46 1 .
Chr2	stalkie_big_nohaplotig	CDS	101152335	101153321	.	-	0	Parent=FBgn0038407.1.mrna1;Target=FBgn0038407.1 1656 670 .
Chr2	stalkie_big_nohaplotig	CDS	101153381	101154003	.	-	2	Parent=FBgn0038407.1.mrna1;Target=FBgn0038407.1 669 47 .
Chr2	stalkie_big_nohaplotig	CDS	101180112	101180157	.	-	0	Parent=FBgn0038407.1.mrna1;Target=FBgn0038407.1 46 1 .
Chr2	gffcl	locus	101195028	101195692	.	-	.	ID=RLOC_00020005;geneIDs=FBgn0010438.1.path1;transcripts=FBgn0010438.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101195028	101195692	.	-	.	ID=FBgn0010438.1.mrna1;geneID=FBgn0010438.1.path1;Name=FBgn0010438.1;Dir=sensecoverage=100.0;identity=100.0;matches=441;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020005
Chr2	stalkie_big_nohaplotig	exon	101195028	101195241	100	-	.	Parent=FBgn0010438.1.mrna1;Target=FBgn0010438.1 228 441 +
Chr2	stalkie_big_nohaplotig	exon	101195310	101195418	100	-	.	Parent=FBgn0010438.1.mrna1;Target=FBgn0010438.1 119 227 +
Chr2	stalkie_big_nohaplotig	exon	101195513	101195597	100	-	.	Parent=FBgn0010438.1.mrna1;Target=FBgn0010438.1 34 118 +
Chr2	stalkie_big_nohaplotig	exon	101195660	101195692	100	-	.	Parent=FBgn0010438.1.mrna1;Target=FBgn0010438.1 1 33 +
Chr2	stalkie_big_nohaplotig	CDS	101195028	101195241	.	-	1	Parent=FBgn0010438.1.mrna1;Target=FBgn0010438.1 228 441 +
Chr2	stalkie_big_nohaplotig	CDS	101195310	101195418	.	-	2	Parent=FBgn0010438.1.mrna1;Target=FBgn0010438.1 119 227 +
Chr2	stalkie_big_nohaplotig	CDS	101195513	101195597	.	-	0	Parent=FBgn0010438.1.mrna1;Target=FBgn0010438.1 34 118 +
Chr2	stalkie_big_nohaplotig	CDS	101195660	101195692	.	-	0	Parent=FBgn0010438.1.mrna1;Target=FBgn0010438.1 1 33 +
Chr2	gffcl	locus	101210300	101225447	.	+	.	ID=RLOC_00020006;geneIDs=comp149320_c0_seq1.path1;transcripts=comp149320_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101210300	101225447	.	+	.	ID=comp149320_c0_seq1.mrna1;geneID=comp149320_c0_seq1.path1;Name=comp149320_c0_seq1;Dir=sensecoverage=99.8;identity=100.0;matches=617;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020006
Chr2	stalkie_big_nohaplotig	exon	101210300	101210594	100	+	.	Parent=comp149320_c0_seq1.mrna1;Target=comp149320_c0_seq1 2 296 +
Chr2	stalkie_big_nohaplotig	exon	101211023	101211297	100	+	.	Parent=comp149320_c0_seq1.mrna1;Target=comp149320_c0_seq1 297 571 +
Chr2	stalkie_big_nohaplotig	exon	101225401	101225447	100	+	.	Parent=comp149320_c0_seq1.mrna1;Target=comp149320_c0_seq1 572 618 +
Chr2	stalkie_big_nohaplotig	CDS	101210506	101210594	.	+	0	Parent=comp149320_c0_seq1.mrna1;Target=comp149320_c0_seq1 208 296 +
Chr2	stalkie_big_nohaplotig	CDS	101211023	101211128	.	+	1	Parent=comp149320_c0_seq1.mrna1;Target=comp149320_c0_seq1 297 402 +
Chr2	gffcl	locus	101302021	101302309	.	+	.	ID=RLOC_00020008;geneIDs=comp1215390_c0_seq1.path1;transcripts=comp1215390_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101302021	101302309	.	+	.	ID=comp1215390_c0_seq1.mrna1;geneID=comp1215390_c0_seq1.path1;Name=comp1215390_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=289;mismatches=0;indels=0;unknowns=0;Target=comp1215390_c0_seq1 289 1 .;CDS_Target=comp1215390_c0_seq1 167 3 .;locus=RLOC_00020008
Chr2	stalkie_big_nohaplotig	exon	101302021	101302309	100	+	.	Parent=comp1215390_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101302023	101302187	.	+	0	Parent=comp1215390_c0_seq1.mrna1
Chr2	gffcl	locus	101303382	101303939	.	+	.	ID=RLOC_00020009;geneIDs=comp624047_c0_seq1.path1;transcripts=comp624047_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101303382	101303939	.	+	.	ID=comp624047_c0_seq1.mrna1;geneID=comp624047_c0_seq1.path1;Name=comp624047_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=558;mismatches=0;indels=0;unknowns=0;Target=comp624047_c0_seq1 558 1 .;CDS_Target=comp624047_c0_seq1 97 2 .;locus=RLOC_00020009
Chr2	stalkie_big_nohaplotig	exon	101303382	101303939	100	+	.	Parent=comp624047_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101303383	101303478	.	+	0	Parent=comp624047_c0_seq1.mrna1
Chr2	gffcl	locus	101332062	101340768	.	+	.	ID=RLOC_00020010;geneIDs=comp348079_c0_seq1.path1;transcripts=comp348079_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101332062	101340768	.	+	.	ID=comp348079_c0_seq1.mrna1;geneID=comp348079_c0_seq1.path1;Name=comp348079_c0_seq1;Dir=indeterminatecoverage=93.1;identity=100.0;matches=337;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020010
Chr2	stalkie_big_nohaplotig	exon	101332062	101332064	100	+	.	Parent=comp348079_c0_seq1.mrna1;Target=comp348079_c0_seq1 28 26 .
Chr2	stalkie_big_nohaplotig	exon	101334229	101334232	100	+	.	Parent=comp348079_c0_seq1.mrna1;Target=comp348079_c0_seq1 32 29 .
Chr2	stalkie_big_nohaplotig	exon	101340439	101340768	100	+	.	Parent=comp348079_c0_seq1.mrna1;Target=comp348079_c0_seq1 362 33 .
Chr2	stalkie_big_nohaplotig	CDS	101334229	101334232	.	+	1	Parent=comp348079_c0_seq1.mrna1;Target=comp348079_c0_seq1 32 29 .
Chr2	stalkie_big_nohaplotig	CDS	101340439	101340472	.	+	0	Parent=comp348079_c0_seq1.mrna1;Target=comp348079_c0_seq1 66 33 .
Chr2	gffcl	locus	101337525	101339123	.	+	.	ID=RLOC_00020011;geneIDs=FBgn0040071.path1;transcripts=FBgn0040071.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101337525	101339123	.	+	.	ID=FBgn0040071.mrna1;geneID=FBgn0040071.path1;Name=FBgn0040071;Dir=indeterminatecoverage=98.9;identity=100.0;matches=1599;mismatches=0;indels=0;unknowns=0;Target=FBgn0040071 1617 19 .;locus=RLOC_00020011
Chr2	stalkie_big_nohaplotig	exon	101337525	101339123	100	+	.	Parent=FBgn0040071.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101337525	101339123	.	+	0	Parent=FBgn0040071.mrna1
Chr2	gffcl	locus	101339142	101340209	.	+	.	ID=RLOC_00020012;geneIDs=Dv_FBgn0210494.path1;transcripts=Dv_FBgn0210494.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101339142	101340209	.	+	.	ID=Dv_FBgn0210494.mrna1;geneID=Dv_FBgn0210494.path1;Name=Dv_FBgn0210494;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1068;mismatches=0;indels=0;unknowns=0;Target=Dv_FBgn0210494 1068 1 .;locus=RLOC_00020012
Chr2	stalkie_big_nohaplotig	exon	101339142	101340209	100	+	.	Parent=Dv_FBgn0210494.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101339142	101340209	.	+	0	Parent=Dv_FBgn0210494.mrna1
Chr2	gffcl	locus	101340785	101341295	.	-	.	ID=RLOC_00020013;geneIDs=comp140479_c1_seq1.path1;transcripts=comp140479_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101340785	101341295	.	-	.	ID=comp140479_c1_seq1.mrna1;geneID=comp140479_c1_seq1.path1;Name=comp140479_c1_seq1;Dir=indeterminatecoverage=99.4;identity=99.8;matches=511;mismatches=0;indels=1;unknowns=0;Target=comp140479_c1_seq1 512 1 .;CDS_Target=comp140479_c1_seq1 436 350 .;locus=RLOC_00020013
Chr2	stalkie_big_nohaplotig	exon	101340785	101341295	99	-	.	Parent=comp140479_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101340861	101340946	.	-	0	Parent=comp140479_c1_seq1.mrna1
Chr2	gffcl	locus	101345787	101346545	.	-	.	ID=RLOC_00020014;geneIDs=FBgn0031766.1.path1;transcripts=FBgn0031766.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101345787	101346545	.	-	.	ID=FBgn0031766.1.mrna1;geneID=FBgn0031766.1.path1;Name=FBgn0031766.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=759;mismatches=0;indels=0;unknowns=0;Target=FBgn0031766.1 759 1 .;locus=RLOC_00020014
Chr2	stalkie_big_nohaplotig	exon	101345787	101346545	100	-	.	Parent=FBgn0031766.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101345787	101346545	.	-	0	Parent=FBgn0031766.1.mrna1
Chr2	gffcl	locus	101485395	101485722	.	+	.	ID=RLOC_00020015;geneIDs=comp773697_c0_seq1.path2;transcripts=comp773697_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	101485395	101485722	.	+	.	ID=comp773697_c0_seq1.mrna2;geneID=comp773697_c0_seq1.path2;Name=comp773697_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=328;mismatches=0;indels=0;unknowns=0;Target=comp773697_c0_seq1 329 2 .;CDS_Target=comp773697_c0_seq1 186 109 .;locus=RLOC_00020015
Chr2	stalkie_big_nohaplotig	exon	101485395	101485722	100	+	.	Parent=comp773697_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	101485502	101485579	.	+	0	Parent=comp773697_c0_seq1.mrna2
Chr2	gffcl	locus	101503495	101503990	.	+	.	ID=RLOC_00020016;geneIDs=comp117980_c0_seq1.path1;transcripts=comp117980_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101503495	101503990	.	+	.	ID=comp117980_c0_seq1.mrna1;geneID=comp117980_c0_seq1.path1;Name=comp117980_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=496;mismatches=0;indels=0;unknowns=0;Target=comp117980_c0_seq1 496 1 .;CDS_Target=comp117980_c0_seq1 130 44 .;locus=RLOC_00020016
Chr2	stalkie_big_nohaplotig	exon	101503495	101503990	100	+	.	Parent=comp117980_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101503538	101503624	.	+	0	Parent=comp117980_c0_seq1.mrna1
Chr2	gffcl	locus	101510008	101510916	.	-	.	ID=RLOC_00020017;geneIDs=comp160570_c4_seq1.path1;transcripts=comp160570_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101510008	101510916	.	-	.	ID=comp160570_c4_seq1.mrna1;geneID=comp160570_c4_seq1.path1;Name=comp160570_c4_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=909;mismatches=0;indels=0;unknowns=0;Target=comp160570_c4_seq1 909 1 .;CDS_Target=comp160570_c4_seq1 289 2 .;locus=RLOC_00020017
Chr2	stalkie_big_nohaplotig	exon	101510008	101510916	100	-	.	Parent=comp160570_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101510628	101510915	.	-	0	Parent=comp160570_c4_seq1.mrna1
Chr2	gffcl	locus	101514745	101537692	.	+	.	ID=RLOC_00020018;geneIDs=FBgn0051368.1.path1;transcripts=FBgn0051368.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101514745	101537692	.	+	.	ID=FBgn0051368.1.mrna1;geneID=FBgn0051368.1.path1;Name=FBgn0051368.1;Dir=sensecoverage=100.0;identity=100.0;matches=4506;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020018
Chr2	stalkie_big_nohaplotig	exon	101514745	101514858	100	+	.	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 1 114 +
Chr2	stalkie_big_nohaplotig	exon	101514929	101515406	100	+	.	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 115 592 +
Chr2	stalkie_big_nohaplotig	exon	101515461	101515579	100	+	.	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 593 711 +
Chr2	stalkie_big_nohaplotig	exon	101515646	101515873	100	+	.	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 712 939 +
Chr2	stalkie_big_nohaplotig	exon	101532441	101533272	100	+	.	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 940 1771 +
Chr2	stalkie_big_nohaplotig	exon	101533339	101533547	100	+	.	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 1772 1980 +
Chr2	stalkie_big_nohaplotig	exon	101533615	101533806	100	+	.	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 1981 2172 +
Chr2	stalkie_big_nohaplotig	exon	101533871	101534163	100	+	.	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 2173 2465 +
Chr2	stalkie_big_nohaplotig	exon	101534226	101535269	100	+	.	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 2466 3509 +
Chr2	stalkie_big_nohaplotig	exon	101535666	101535831	100	+	.	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 3510 3675 +
Chr2	stalkie_big_nohaplotig	exon	101535887	101536255	100	+	.	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 3676 4044 +
Chr2	stalkie_big_nohaplotig	exon	101537231	101537692	100	+	.	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 4045 4506 +
Chr2	stalkie_big_nohaplotig	CDS	101514745	101514858	.	+	0	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 1 114 +
Chr2	stalkie_big_nohaplotig	CDS	101514929	101515406	.	+	0	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 115 592 +
Chr2	stalkie_big_nohaplotig	CDS	101515461	101515579	.	+	2	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 593 711 +
Chr2	stalkie_big_nohaplotig	CDS	101515646	101515873	.	+	0	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 712 939 +
Chr2	stalkie_big_nohaplotig	CDS	101532441	101533272	.	+	0	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 940 1771 +
Chr2	stalkie_big_nohaplotig	CDS	101533339	101533547	.	+	2	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 1772 1980 +
Chr2	stalkie_big_nohaplotig	CDS	101533615	101533806	.	+	0	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 1981 2172 +
Chr2	stalkie_big_nohaplotig	CDS	101533871	101534163	.	+	0	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 2173 2465 +
Chr2	stalkie_big_nohaplotig	CDS	101534226	101535269	.	+	1	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 2466 3509 +
Chr2	stalkie_big_nohaplotig	CDS	101535666	101535831	.	+	1	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 3510 3675 +
Chr2	stalkie_big_nohaplotig	CDS	101535887	101536255	.	+	0	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 3676 4044 +
Chr2	stalkie_big_nohaplotig	CDS	101537231	101537692	.	+	0	Parent=FBgn0051368.1.mrna1;Target=FBgn0051368.1 4045 4506 +
Chr2	gffcl	locus	101522574	101529066	.	-	.	ID=RLOC_00020019;geneIDs=FBgn0037960.1.path1;transcripts=FBgn0037960.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101522574	101529066	.	-	.	ID=FBgn0037960.1.mrna1;geneID=FBgn0037960.1.path1;Name=FBgn0037960.1;Dir=sensecoverage=100.0;identity=100.0;matches=1794;mismatches=0;indels=0;unknowns=3;locus=RLOC_00020019
Chr2	stalkie_big_nohaplotig	exon	101522574	101522829	100	-	.	Parent=FBgn0037960.1.mrna1;Target=FBgn0037960.1 1542 1797 +
Chr2	stalkie_big_nohaplotig	exon	101522886	101523270	100	-	.	Parent=FBgn0037960.1.mrna1;Target=FBgn0037960.1 1157 1541 +
Chr2	stalkie_big_nohaplotig	exon	101523338	101523456	100	-	.	Parent=FBgn0037960.1.mrna1;Target=FBgn0037960.1 1038 1156 +
Chr2	stalkie_big_nohaplotig	exon	101523512	101523696	100	-	.	Parent=FBgn0037960.1.mrna1;Target=FBgn0037960.1 853 1037 +
Chr2	stalkie_big_nohaplotig	exon	101523781	101523939	100	-	.	Parent=FBgn0037960.1.mrna1;Target=FBgn0037960.1 694 852 +
Chr2	stalkie_big_nohaplotig	exon	101524372	101524493	100	-	.	Parent=FBgn0037960.1.mrna1;Target=FBgn0037960.1 572 693 +
Chr2	stalkie_big_nohaplotig	exon	101528496	101529066	100	-	.	Parent=FBgn0037960.1.mrna1;Target=FBgn0037960.1 1 571 +
Chr2	stalkie_big_nohaplotig	CDS	101522574	101522829	.	-	1	Parent=FBgn0037960.1.mrna1;Target=FBgn0037960.1 1542 1797 +
Chr2	stalkie_big_nohaplotig	CDS	101522886	101523270	.	-	2	Parent=FBgn0037960.1.mrna1;Target=FBgn0037960.1 1157 1541 +
Chr2	stalkie_big_nohaplotig	CDS	101523338	101523456	.	-	1	Parent=FBgn0037960.1.mrna1;Target=FBgn0037960.1 1038 1156 +
Chr2	stalkie_big_nohaplotig	CDS	101523512	101523696	.	-	0	Parent=FBgn0037960.1.mrna1;Target=FBgn0037960.1 853 1037 +
Chr2	stalkie_big_nohaplotig	CDS	101523781	101523939	.	-	0	Parent=FBgn0037960.1.mrna1;Target=FBgn0037960.1 694 852 +
Chr2	stalkie_big_nohaplotig	CDS	101524372	101524493	.	-	2	Parent=FBgn0037960.1.mrna1;Target=FBgn0037960.1 572 693 +
Chr2	stalkie_big_nohaplotig	CDS	101528496	101529066	.	-	0	Parent=FBgn0037960.1.mrna1;Target=FBgn0037960.1 1 571 +
Chr2	gffcl	locus	101537782	101539599	.	-	.	ID=RLOC_00020020;geneIDs=FBgn0037962.1.path1;transcripts=FBgn0037962.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101537782	101539599	.	-	.	ID=FBgn0037962.1.mrna1;geneID=FBgn0037962.1.path1;Name=FBgn0037962.1;Dir=sensecoverage=100.0;identity=99.9;matches=764;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020020
Chr2	stalkie_big_nohaplotig	exon	101537782	101538158	100	-	.	Parent=FBgn0037962.1.mrna1;Target=FBgn0037962.1 389 765 +
Chr2	stalkie_big_nohaplotig	exon	101538224	101538356	100	-	.	Parent=FBgn0037962.1.mrna1;Target=FBgn0037962.1 256 388 +
Chr2	stalkie_big_nohaplotig	exon	101539282	101539404	100	-	.	Parent=FBgn0037962.1.mrna1;Target=FBgn0037962.1 133 255 +
Chr2	stalkie_big_nohaplotig	exon	101539468	101539599	99	-	.	Parent=FBgn0037962.1.mrna1;Target=FBgn0037962.1 1 132 +
Chr2	stalkie_big_nohaplotig	CDS	101537782	101538158	.	-	2	Parent=FBgn0037962.1.mrna1;Target=FBgn0037962.1 389 765 +
Chr2	stalkie_big_nohaplotig	CDS	101538224	101538356	.	-	0	Parent=FBgn0037962.1.mrna1;Target=FBgn0037962.1 256 388 +
Chr2	stalkie_big_nohaplotig	CDS	101539282	101539404	.	-	0	Parent=FBgn0037962.1.mrna1;Target=FBgn0037962.1 133 255 +
Chr2	stalkie_big_nohaplotig	CDS	101539468	101539599	.	-	0	Parent=FBgn0037962.1.mrna1;Target=FBgn0037962.1 1 132 +
Chr2	gffcl	locus	101540088	101544502	.	+	.	ID=RLOC_00020021;geneIDs=FBgn0037958.1.path1;transcripts=FBgn0037958.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101540088	101544502	.	+	.	ID=FBgn0037958.1.mrna1;geneID=FBgn0037958.1.path1;Name=FBgn0037958.1;Dir=sensecoverage=100.0;identity=100.0;matches=2235;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020021
Chr2	stalkie_big_nohaplotig	exon	101540088	101540120	100	+	.	Parent=FBgn0037958.1.mrna1;Target=FBgn0037958.1 1 33 +
Chr2	stalkie_big_nohaplotig	exon	101540246	101540545	100	+	.	Parent=FBgn0037958.1.mrna1;Target=FBgn0037958.1 34 333 +
Chr2	stalkie_big_nohaplotig	exon	101540612	101541136	100	+	.	Parent=FBgn0037958.1.mrna1;Target=FBgn0037958.1 334 858 +
Chr2	stalkie_big_nohaplotig	exon	101541214	101541476	100	+	.	Parent=FBgn0037958.1.mrna1;Target=FBgn0037958.1 859 1121 +
Chr2	stalkie_big_nohaplotig	exon	101541539	101541698	100	+	.	Parent=FBgn0037958.1.mrna1;Target=FBgn0037958.1 1122 1281 +
Chr2	stalkie_big_nohaplotig	exon	101542590	101542678	100	+	.	Parent=FBgn0037958.1.mrna1;Target=FBgn0037958.1 1282 1370 +
Chr2	stalkie_big_nohaplotig	exon	101542764	101543082	100	+	.	Parent=FBgn0037958.1.mrna1;Target=FBgn0037958.1 1371 1689 +
Chr2	stalkie_big_nohaplotig	exon	101543138	101543260	100	+	.	Parent=FBgn0037958.1.mrna1;Target=FBgn0037958.1 1690 1812 +
Chr2	stalkie_big_nohaplotig	exon	101543321	101543443	100	+	.	Parent=FBgn0037958.1.mrna1;Target=FBgn0037958.1 1813 1935 +
Chr2	stalkie_big_nohaplotig	exon	101544203	101544502	100	+	.	Parent=FBgn0037958.1.mrna1;Target=FBgn0037958.1 1936 2235 +
Chr2	stalkie_big_nohaplotig	CDS	101540088	101540120	.	+	0	Parent=FBgn0037958.1.mrna1;Target=FBgn0037958.1 1 33 +
Chr2	stalkie_big_nohaplotig	CDS	101540246	101540545	.	+	0	Parent=FBgn0037958.1.mrna1;Target=FBgn0037958.1 34 333 +
Chr2	stalkie_big_nohaplotig	CDS	101540612	101541136	.	+	0	Parent=FBgn0037958.1.mrna1;Target=FBgn0037958.1 334 858 +
Chr2	stalkie_big_nohaplotig	CDS	101541214	101541476	.	+	0	Parent=FBgn0037958.1.mrna1;Target=FBgn0037958.1 859 1121 +
Chr2	stalkie_big_nohaplotig	CDS	101541539	101541698	.	+	1	Parent=FBgn0037958.1.mrna1;Target=FBgn0037958.1 1122 1281 +
Chr2	stalkie_big_nohaplotig	CDS	101542590	101542678	.	+	0	Parent=FBgn0037958.1.mrna1;Target=FBgn0037958.1 1282 1370 +
Chr2	stalkie_big_nohaplotig	CDS	101542764	101543082	.	+	1	Parent=FBgn0037958.1.mrna1;Target=FBgn0037958.1 1371 1689 +
Chr2	stalkie_big_nohaplotig	CDS	101543138	101543260	.	+	0	Parent=FBgn0037958.1.mrna1;Target=FBgn0037958.1 1690 1812 +
Chr2	stalkie_big_nohaplotig	CDS	101543321	101543443	.	+	0	Parent=FBgn0037958.1.mrna1;Target=FBgn0037958.1 1813 1935 +
Chr2	stalkie_big_nohaplotig	CDS	101544203	101544502	.	+	0	Parent=FBgn0037958.1.mrna1;Target=FBgn0037958.1 1936 2235 +
Chr2	gffcl	locus	101544616	101549139	.	-	.	ID=RLOC_00020022;geneIDs=FBgn0003312.1.path1;transcripts=FBgn0003312.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101544616	101549139	.	-	.	ID=FBgn0003312.1.mrna1;geneID=FBgn0003312.1.path1;Name=FBgn0003312.1;Dir=sensecoverage=100.0;identity=100.0;matches=1614;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020022
Chr2	stalkie_big_nohaplotig	exon	101544616	101544732	100	-	.	Parent=FBgn0003312.1.mrna1;Target=FBgn0003312.1 1498 1614 +
Chr2	stalkie_big_nohaplotig	exon	101544812	101545027	100	-	.	Parent=FBgn0003312.1.mrna1;Target=FBgn0003312.1 1282 1497 +
Chr2	stalkie_big_nohaplotig	exon	101545304	101545516	100	-	.	Parent=FBgn0003312.1.mrna1;Target=FBgn0003312.1 1069 1281 +
Chr2	stalkie_big_nohaplotig	exon	101545720	101546084	100	-	.	Parent=FBgn0003312.1.mrna1;Target=FBgn0003312.1 704 1068 +
Chr2	stalkie_big_nohaplotig	exon	101546830	101547038	100	-	.	Parent=FBgn0003312.1.mrna1;Target=FBgn0003312.1 495 703 +
Chr2	stalkie_big_nohaplotig	exon	101547123	101547332	100	-	.	Parent=FBgn0003312.1.mrna1;Target=FBgn0003312.1 285 494 +
Chr2	stalkie_big_nohaplotig	exon	101548856	101549139	100	-	.	Parent=FBgn0003312.1.mrna1;Target=FBgn0003312.1 1 284 +
Chr2	stalkie_big_nohaplotig	CDS	101544616	101544732	.	-	0	Parent=FBgn0003312.1.mrna1;Target=FBgn0003312.1 1498 1614 +
Chr2	stalkie_big_nohaplotig	CDS	101544812	101545027	.	-	0	Parent=FBgn0003312.1.mrna1;Target=FBgn0003312.1 1282 1497 +
Chr2	stalkie_big_nohaplotig	CDS	101545304	101545516	.	-	0	Parent=FBgn0003312.1.mrna1;Target=FBgn0003312.1 1069 1281 +
Chr2	stalkie_big_nohaplotig	CDS	101545720	101546084	.	-	2	Parent=FBgn0003312.1.mrna1;Target=FBgn0003312.1 704 1068 +
Chr2	stalkie_big_nohaplotig	CDS	101546830	101547038	.	-	1	Parent=FBgn0003312.1.mrna1;Target=FBgn0003312.1 495 703 +
Chr2	stalkie_big_nohaplotig	CDS	101547123	101547332	.	-	1	Parent=FBgn0003312.1.mrna1;Target=FBgn0003312.1 285 494 +
Chr2	stalkie_big_nohaplotig	CDS	101548856	101549139	.	-	0	Parent=FBgn0003312.1.mrna1;Target=FBgn0003312.1 1 284 +
Chr2	gffcl	locus	101551709	101552467	.	-	.	ID=RLOC_00020023;geneIDs=ORF3192.path1;transcripts=ORF3192.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101551709	101552467	.	-	.	ID=ORF3192.mrna1;geneID=ORF3192.path1;Name=ORF3192;Dir=indeterminatecoverage=100.0;identity=100.0;matches=759;mismatches=0;indels=0;unknowns=0;Target=ORF3192 759 1 .;locus=RLOC_00020023
Chr2	stalkie_big_nohaplotig	exon	101551709	101552467	100	-	.	Parent=ORF3192.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101551709	101552467	.	-	0	Parent=ORF3192.mrna1
Chr2	gffcl	locus	101600968	101601564	.	-	.	ID=RLOC_00020025;geneIDs=FBgn0002633.1.path1;transcripts=FBgn0002633.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101600968	101601564	.	-	.	ID=FBgn0002633.1.mrna1;geneID=FBgn0002633.1.path1;Name=FBgn0002633.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=596;mismatches=1;indels=0;unknowns=0;Target=FBgn0002633.1 597 1 .;locus=RLOC_00020025
Chr2	stalkie_big_nohaplotig	exon	101600968	101601564	99	-	.	Parent=FBgn0002633.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101600968	101601564	.	-	0	Parent=FBgn0002633.1.mrna1
Chr2	gffcl	locus	101606319	101607285	.	-	.	ID=RLOC_00020026;geneIDs=comp52815_c0_seq1.path1;transcripts=comp52815_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101606319	101607285	.	-	.	ID=comp52815_c0_seq1.mrna1;geneID=comp52815_c0_seq1.path1;Name=comp52815_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=967;mismatches=0;indels=1;unknowns=0;Target=comp52815_c0_seq1 968 1 .;CDS_Target=comp52815_c0_seq1 490 62 .;locus=RLOC_00020026
Chr2	stalkie_big_nohaplotig	exon	101606319	101607285	99	-	.	Parent=comp52815_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101606796	101607224	.	-	0	Parent=comp52815_c0_seq1.mrna1
Chr2	gffcl	locus	101610556	101611122	.	-	.	ID=RLOC_00020027;geneIDs=FBgn0002631.2.path1;transcripts=FBgn0002631.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101610556	101611122	.	-	.	ID=FBgn0002631.2.mrna1;geneID=FBgn0002631.2.path1;Name=FBgn0002631.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=567;mismatches=0;indels=0;unknowns=0;Target=FBgn0002631.2 567 1 .;locus=RLOC_00020027
Chr2	stalkie_big_nohaplotig	exon	101610556	101611122	100	-	.	Parent=FBgn0002631.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101610556	101611122	.	-	0	Parent=FBgn0002631.2.mrna1
Chr2	gffcl	locus	101621953	101622522	.	+	.	ID=RLOC_00020028;geneIDs=FBgn0002629.1.path1;transcripts=FBgn0002629.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101621953	101622522	.	+	.	ID=FBgn0002629.1.mrna1;geneID=FBgn0002629.1.path1;Name=FBgn0002629.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=570;mismatches=0;indels=0;unknowns=0;Target=FBgn0002629.1 570 1 .;locus=RLOC_00020028
Chr2	stalkie_big_nohaplotig	exon	101621953	101622522	100	+	.	Parent=FBgn0002629.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101621953	101622522	.	+	0	Parent=FBgn0002629.1.mrna1
Chr2	gffcl	locus	101629050	101629751	.	-	.	ID=RLOC_00020029;geneIDs=FBgn0002609.1.path1;transcripts=FBgn0002609.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101629050	101629751	.	-	.	ID=FBgn0002609.1.mrna1;geneID=FBgn0002609.1.path1;Name=FBgn0002609.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=702;mismatches=0;indels=0;unknowns=0;Target=FBgn0002609.1 702 1 .;locus=RLOC_00020029
Chr2	stalkie_big_nohaplotig	exon	101629050	101629751	100	-	.	Parent=FBgn0002609.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101629050	101629751	.	-	0	Parent=FBgn0002609.1.mrna1
Chr2	gffcl	locus	101645360	101646043	.	+	.	ID=RLOC_00020030;geneIDs=FBgn0002592.1.path1;transcripts=FBgn0002592.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101645360	101646043	.	+	.	ID=FBgn0002592.1.mrna1;geneID=FBgn0002592.1.path1;Name=FBgn0002592.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=684;mismatches=0;indels=0;unknowns=0;Target=FBgn0002592.1 684 1 .;locus=RLOC_00020030
Chr2	stalkie_big_nohaplotig	exon	101645360	101646043	100	+	.	Parent=FBgn0002592.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101645360	101646043	.	+	0	Parent=FBgn0002592.1.mrna1
Chr2	gffcl	locus	101647708	101648359	.	-	.	ID=RLOC_00020031;geneIDs=FBgn0002578.1.path1;transcripts=FBgn0002578.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101647708	101648359	.	-	.	ID=FBgn0002578.1.mrna1;geneID=FBgn0002578.1.path1;Name=FBgn0002578.1;Dir=sensecoverage=100.0;identity=100.0;matches=501;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020031
Chr2	stalkie_big_nohaplotig	exon	101647708	101647748	100	-	.	Parent=FBgn0002578.1.mrna1;Target=FBgn0002578.1 461 501 +
Chr2	stalkie_big_nohaplotig	exon	101647814	101648023	100	-	.	Parent=FBgn0002578.1.mrna1;Target=FBgn0002578.1 251 460 +
Chr2	stalkie_big_nohaplotig	exon	101648110	101648359	100	-	.	Parent=FBgn0002578.1.mrna1;Target=FBgn0002578.1 1 250 +
Chr2	stalkie_big_nohaplotig	CDS	101647708	101647748	.	-	2	Parent=FBgn0002578.1.mrna1;Target=FBgn0002578.1 461 501 +
Chr2	stalkie_big_nohaplotig	CDS	101647814	101648023	.	-	2	Parent=FBgn0002578.1.mrna1;Target=FBgn0002578.1 251 460 +
Chr2	stalkie_big_nohaplotig	CDS	101648110	101648359	.	-	0	Parent=FBgn0002578.1.mrna1;Target=FBgn0002578.1 1 250 +
Chr2	gffcl	locus	101656141	101656939	.	+	.	ID=RLOC_00020032;geneIDs=comp146084_c0_seq1.path2;transcripts=comp146084_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	101656141	101656939	.	+	.	ID=comp146084_c0_seq1.mrna2;geneID=comp146084_c0_seq1.path2;Name=comp146084_c0_seq1;Dir=indeterminatecoverage=93.7;identity=100.0;matches=799;mismatches=0;indels=0;unknowns=0;Target=comp146084_c0_seq1 853 55 .;CDS_Target=comp146084_c0_seq1 526 122 .;locus=RLOC_00020032
Chr2	stalkie_big_nohaplotig	exon	101656141	101656939	100	+	.	Parent=comp146084_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	101656208	101656612	.	+	0	Parent=comp146084_c0_seq1.mrna2
Chr2	gffcl	locus	101660970	101661446	.	-	.	ID=RLOC_00020033;geneIDs=FBgn0002732.1.path1;transcripts=FBgn0002732.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101660970	101661446	.	-	.	ID=FBgn0002732.1.mrna1;geneID=FBgn0002732.1.path1;Name=FBgn0002732.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=477;mismatches=0;indels=0;unknowns=0;Target=FBgn0002732.1 477 1 .;locus=RLOC_00020033
Chr2	stalkie_big_nohaplotig	exon	101660970	101661446	100	-	.	Parent=FBgn0002732.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101660970	101661446	.	-	0	Parent=FBgn0002732.1.mrna1
Chr2	gffcl	locus	101692437	101693141	.	-	.	ID=RLOC_00020035;geneIDs=FBgn0002735.2.path1;transcripts=FBgn0002735.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101692437	101693141	.	-	.	ID=FBgn0002735.2.mrna1;geneID=FBgn0002735.2.path1;Name=FBgn0002735.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=705;mismatches=0;indels=0;unknowns=0;Target=FBgn0002735.2 705 1 .;locus=RLOC_00020035
Chr2	stalkie_big_nohaplotig	exon	101692437	101693141	100	-	.	Parent=FBgn0002735.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101692437	101693141	.	-	0	Parent=FBgn0002735.2.mrna1
Chr2	gffcl	locus	101701044	101701622	.	-	.	ID=RLOC_00020036;geneIDs=FBgn0002734.1.path1;transcripts=FBgn0002734.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101701044	101701622	.	-	.	ID=FBgn0002734.1.mrna1;geneID=FBgn0002734.1.path1;Name=FBgn0002734.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=579;mismatches=0;indels=0;unknowns=0;Target=FBgn0002734.1 579 1 .;locus=RLOC_00020036
Chr2	stalkie_big_nohaplotig	exon	101701044	101701622	100	-	.	Parent=FBgn0002734.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101701044	101701622	.	-	0	Parent=FBgn0002734.1.mrna1
Chr2	gffcl	locus	101742224	101742736	.	-	.	ID=RLOC_00020037;geneIDs=FBgn0000253.14.path1;transcripts=FBgn0000253.14.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101742224	101742736	.	-	.	ID=FBgn0000253.14.mrna1;geneID=FBgn0000253.14.path1;Name=FBgn0000253.14;Dir=indeterminatecoverage=100.0;identity=100.0;matches=513;mismatches=0;indels=0;unknowns=0;Target=FBgn0000253.14 513 1 .;locus=RLOC_00020037
Chr2	stalkie_big_nohaplotig	exon	101742224	101742736	100	-	.	Parent=FBgn0000253.14.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101742224	101742736	.	-	0	Parent=FBgn0000253.14.mrna1
Chr2	gffcl	locus	101764468	101767487	.	+	.	ID=RLOC_00020038;geneIDs=comp148532_c0_seq1.path1;transcripts=comp148532_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101764468	101767487	.	+	.	ID=comp148532_c0_seq1.mrna1;geneID=comp148532_c0_seq1.path1;Name=comp148532_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2965;mismatches=0;indels=0;unknowns=0;Target=comp148532_c0_seq1 504 343 .;locus=RLOC_00020038
Chr2	stalkie_big_nohaplotig	exon	101764468	101765831	100	+	.	Parent=comp148532_c0_seq1.mrna1;Target=comp148532_c0_seq1 1364 1 .
Chr2	stalkie_big_nohaplotig	exon	101765887	101767487	100	+	.	Parent=comp148532_c0_seq1.mrna1;Target=comp148532_c0_seq1 2965 1365 .
Chr2	stalkie_big_nohaplotig	CDS	101764810	101764971	.	+	0	Parent=comp148532_c0_seq1.mrna1
Chr2	gffcl	locus	101767936	101791885	.	-	.	ID=RLOC_00020039;geneIDs=FBgn0015269.1.path1,comp158493_c1_seq1.path1;transcripts=comp158493_c1_seq1.mrna1,FBgn0015269.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101767936	101791885	.	-	.	ID=comp158493_c1_seq1.mrna1;geneID=comp158493_c1_seq1.path1;Name=comp158493_c1_seq1;Dir=antisensecoverage=99.2;identity=100.0;matches=9319;mismatches=0;indels=1;unknowns=0;locus=RLOC_00020039
Chr2	stalkie_big_nohaplotig	exon	101767936	101768628	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 77 769 -
Chr2	stalkie_big_nohaplotig	exon	101769827	101769924	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 770 867 -
Chr2	stalkie_big_nohaplotig	exon	101774470	101774635	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 868 1033 -
Chr2	stalkie_big_nohaplotig	exon	101774698	101774884	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 1034 1220 -
Chr2	stalkie_big_nohaplotig	exon	101776693	101776895	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 1221 1423 -
Chr2	stalkie_big_nohaplotig	exon	101779025	101779114	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 1424 1513 -
Chr2	stalkie_big_nohaplotig	exon	101780970	101781068	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 1514 1612 -
Chr2	stalkie_big_nohaplotig	exon	101781124	101781366	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 1613 1855 -
Chr2	stalkie_big_nohaplotig	exon	101781430	101781696	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 1856 2122 -
Chr2	stalkie_big_nohaplotig	exon	101781761	101782357	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 2123 2719 -
Chr2	stalkie_big_nohaplotig	exon	101782421	101783647	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 2720 3946 -
Chr2	stalkie_big_nohaplotig	exon	101783706	101783967	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 3947 4208 -
Chr2	stalkie_big_nohaplotig	exon	101784860	101785051	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 4209 4400 -
Chr2	stalkie_big_nohaplotig	exon	101785352	101785772	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 4401 4821 -
Chr2	stalkie_big_nohaplotig	exon	101785839	101786065	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 4822 5048 -
Chr2	stalkie_big_nohaplotig	exon	101786129	101786797	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 5049 5717 -
Chr2	stalkie_big_nohaplotig	exon	101786861	101786995	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 5718 5852 -
Chr2	stalkie_big_nohaplotig	exon	101787049	101787603	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 5853 6407 -
Chr2	stalkie_big_nohaplotig	exon	101787664	101788144	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 6408 6888 -
Chr2	stalkie_big_nohaplotig	exon	101788210	101788254	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 6889 6933 -
Chr2	stalkie_big_nohaplotig	exon	101788314	101788866	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 6934 7486 -
Chr2	stalkie_big_nohaplotig	exon	101788942	101789263	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 7487 7808 -
Chr2	stalkie_big_nohaplotig	exon	101789353	101789849	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 7809 8305 -
Chr2	stalkie_big_nohaplotig	exon	101789906	101790011	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 8306 8411 -
Chr2	stalkie_big_nohaplotig	exon	101790140	101790281	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 8412 8553 -
Chr2	stalkie_big_nohaplotig	exon	101790348	101790732	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 8554 8938 -
Chr2	stalkie_big_nohaplotig	exon	101790980	101791123	100	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 8939 9082 -
Chr2	stalkie_big_nohaplotig	exon	101791573	101791885	99	-	.	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 9083 9396 -
Chr2	stalkie_big_nohaplotig	CDS	101768617	101768628	.	-	0	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 758 769 .
Chr2	stalkie_big_nohaplotig	CDS	101769827	101769924	.	-	2	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 770 867 .
Chr2	stalkie_big_nohaplotig	CDS	101774470	101774635	.	-	0	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 868 1033 .
Chr2	stalkie_big_nohaplotig	CDS	101774698	101774884	.	-	1	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 1034 1220 .
Chr2	stalkie_big_nohaplotig	CDS	101776693	101776895	.	-	0	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 1221 1423 .
Chr2	stalkie_big_nohaplotig	CDS	101779025	101779114	.	-	0	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 1424 1513 .
Chr2	stalkie_big_nohaplotig	CDS	101780970	101781068	.	-	0	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 1514 1612 .
Chr2	stalkie_big_nohaplotig	CDS	101781124	101781366	.	-	0	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 1613 1855 .
Chr2	stalkie_big_nohaplotig	CDS	101781430	101781696	.	-	0	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 1856 2122 .
Chr2	stalkie_big_nohaplotig	CDS	101781761	101782357	.	-	0	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 2123 2719 .
Chr2	stalkie_big_nohaplotig	CDS	101782421	101783647	.	-	0	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 2720 3946 .
Chr2	stalkie_big_nohaplotig	CDS	101783706	101783967	.	-	1	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 3947 4208 .
Chr2	stalkie_big_nohaplotig	CDS	101784860	101785051	.	-	1	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 4209 4400 .
Chr2	stalkie_big_nohaplotig	CDS	101785352	101785772	.	-	2	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 4401 4821 .
Chr2	stalkie_big_nohaplotig	CDS	101785839	101786065	.	-	1	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 4822 5048 .
Chr2	stalkie_big_nohaplotig	CDS	101786129	101786797	.	-	1	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 5049 5717 .
Chr2	stalkie_big_nohaplotig	CDS	101786861	101786995	.	-	1	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 5718 5852 .
Chr2	stalkie_big_nohaplotig	CDS	101787049	101787603	.	-	1	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 5853 6407 .
Chr2	stalkie_big_nohaplotig	CDS	101787664	101788144	.	-	2	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 6408 6888 .
Chr2	stalkie_big_nohaplotig	CDS	101788210	101788254	.	-	2	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 6889 6933 .
Chr2	stalkie_big_nohaplotig	CDS	101788314	101788866	.	-	0	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 6934 7486 .
Chr2	stalkie_big_nohaplotig	CDS	101788942	101789263	.	-	1	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 7487 7808 .
Chr2	stalkie_big_nohaplotig	CDS	101789353	101789849	.	-	0	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 7809 8305 .
Chr2	stalkie_big_nohaplotig	CDS	101789906	101790011	.	-	1	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 8306 8411 .
Chr2	stalkie_big_nohaplotig	CDS	101790140	101790281	.	-	2	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 8412 8553 .
Chr2	stalkie_big_nohaplotig	CDS	101790348	101790732	.	-	0	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 8554 8938 .
Chr2	stalkie_big_nohaplotig	CDS	101790980	101791123	.	-	0	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 8939 9082 .
Chr2	stalkie_big_nohaplotig	CDS	101791573	101791632	.	-	0	Parent=comp158493_c1_seq1.mrna1;Target=comp158493_c1_seq1 9083 9142 .
Chr2	stalkie_big_nohaplotig	mRNA	101773880	101791644	.	-	.	ID=FBgn0015269.1.mrna1;geneID=FBgn0015269.1.path1;Name=FBgn0015269.1;Dir=sensecoverage=100.0;identity=100.0;matches=8403;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020039
Chr2	stalkie_big_nohaplotig	exon	101773880	101773995	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 8288 8403 +
Chr2	stalkie_big_nohaplotig	exon	101774470	101774635	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 8122 8287 +
Chr2	stalkie_big_nohaplotig	exon	101774698	101774884	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 7935 8121 +
Chr2	stalkie_big_nohaplotig	exon	101776693	101776895	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 7732 7934 +
Chr2	stalkie_big_nohaplotig	exon	101779025	101779114	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 7642 7731 +
Chr2	stalkie_big_nohaplotig	exon	101780970	101781068	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 7543 7641 +
Chr2	stalkie_big_nohaplotig	exon	101781124	101781366	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 7300 7542 +
Chr2	stalkie_big_nohaplotig	exon	101781430	101781696	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 7033 7299 +
Chr2	stalkie_big_nohaplotig	exon	101781761	101782357	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 6436 7032 +
Chr2	stalkie_big_nohaplotig	exon	101782421	101783647	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 5209 6435 +
Chr2	stalkie_big_nohaplotig	exon	101783706	101783967	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 4947 5208 +
Chr2	stalkie_big_nohaplotig	exon	101784860	101785051	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 4755 4946 +
Chr2	stalkie_big_nohaplotig	exon	101785352	101785772	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 4334 4754 +
Chr2	stalkie_big_nohaplotig	exon	101785839	101786065	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 4107 4333 +
Chr2	stalkie_big_nohaplotig	exon	101786129	101786797	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 3438 4106 +
Chr2	stalkie_big_nohaplotig	exon	101786861	101786995	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 3303 3437 +
Chr2	stalkie_big_nohaplotig	exon	101787049	101787603	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 2748 3302 +
Chr2	stalkie_big_nohaplotig	exon	101787664	101788144	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 2267 2747 +
Chr2	stalkie_big_nohaplotig	exon	101788210	101788254	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 2222 2266 +
Chr2	stalkie_big_nohaplotig	exon	101788314	101788866	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 1669 2221 +
Chr2	stalkie_big_nohaplotig	exon	101788942	101789263	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 1347 1668 +
Chr2	stalkie_big_nohaplotig	exon	101789353	101789849	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 850 1346 +
Chr2	stalkie_big_nohaplotig	exon	101789906	101790011	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 744 849 +
Chr2	stalkie_big_nohaplotig	exon	101790140	101790281	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 602 743 +
Chr2	stalkie_big_nohaplotig	exon	101790348	101790732	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 217 601 +
Chr2	stalkie_big_nohaplotig	exon	101790980	101791123	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 73 216 +
Chr2	stalkie_big_nohaplotig	exon	101791573	101791644	100	-	.	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 1 72 +
Chr2	stalkie_big_nohaplotig	CDS	101773880	101773995	.	-	2	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 8288 8403 +
Chr2	stalkie_big_nohaplotig	CDS	101774470	101774635	.	-	0	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 8122 8287 +
Chr2	stalkie_big_nohaplotig	CDS	101774698	101774884	.	-	1	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 7935 8121 +
Chr2	stalkie_big_nohaplotig	CDS	101776693	101776895	.	-	0	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 7732 7934 +
Chr2	stalkie_big_nohaplotig	CDS	101779025	101779114	.	-	0	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 7642 7731 +
Chr2	stalkie_big_nohaplotig	CDS	101780970	101781068	.	-	0	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 7543 7641 +
Chr2	stalkie_big_nohaplotig	CDS	101781124	101781366	.	-	0	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 7300 7542 +
Chr2	stalkie_big_nohaplotig	CDS	101781430	101781696	.	-	0	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 7033 7299 +
Chr2	stalkie_big_nohaplotig	CDS	101781761	101782357	.	-	0	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 6436 7032 +
Chr2	stalkie_big_nohaplotig	CDS	101782421	101783647	.	-	0	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 5209 6435 +
Chr2	stalkie_big_nohaplotig	CDS	101783706	101783967	.	-	1	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 4947 5208 +
Chr2	stalkie_big_nohaplotig	CDS	101784860	101785051	.	-	1	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 4755 4946 +
Chr2	stalkie_big_nohaplotig	CDS	101785352	101785772	.	-	2	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 4334 4754 +
Chr2	stalkie_big_nohaplotig	CDS	101785839	101786065	.	-	1	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 4107 4333 +
Chr2	stalkie_big_nohaplotig	CDS	101786129	101786797	.	-	1	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 3438 4106 +
Chr2	stalkie_big_nohaplotig	CDS	101786861	101786995	.	-	1	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 3303 3437 +
Chr2	stalkie_big_nohaplotig	CDS	101787049	101787603	.	-	1	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 2748 3302 +
Chr2	stalkie_big_nohaplotig	CDS	101787664	101788144	.	-	2	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 2267 2747 +
Chr2	stalkie_big_nohaplotig	CDS	101788210	101788254	.	-	2	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 2222 2266 +
Chr2	stalkie_big_nohaplotig	CDS	101788314	101788866	.	-	0	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 1669 2221 +
Chr2	stalkie_big_nohaplotig	CDS	101788942	101789263	.	-	1	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 1347 1668 +
Chr2	stalkie_big_nohaplotig	CDS	101789353	101789849	.	-	0	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 850 1346 +
Chr2	stalkie_big_nohaplotig	CDS	101789906	101790011	.	-	1	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 744 849 +
Chr2	stalkie_big_nohaplotig	CDS	101790140	101790281	.	-	2	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 602 743 +
Chr2	stalkie_big_nohaplotig	CDS	101790348	101790732	.	-	0	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 217 601 +
Chr2	stalkie_big_nohaplotig	CDS	101790980	101791123	.	-	0	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 73 216 +
Chr2	stalkie_big_nohaplotig	CDS	101791573	101791644	.	-	0	Parent=FBgn0015269.1.mrna1;Target=FBgn0015269.1 1 72 +
Chr2	gffcl	locus	101772856	101773240	.	+	.	ID=RLOC_00020040;geneIDs=comp137709_c0_seq1.path1;transcripts=comp137709_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101772856	101773240	.	+	.	ID=comp137709_c0_seq1.mrna1;geneID=comp137709_c0_seq1.path1;Name=comp137709_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=385;mismatches=0;indels=0;unknowns=0;Target=comp137709_c0_seq1 385 1 .;CDS_Target=comp137709_c0_seq1 301 158 .;locus=RLOC_00020040
Chr2	stalkie_big_nohaplotig	exon	101772856	101773240	100	+	.	Parent=comp137709_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101773013	101773156	.	+	0	Parent=comp137709_c0_seq1.mrna1
Chr2	gffcl	locus	101807331	101808703	.	+	.	ID=RLOC_00020041;geneIDs=FBgn0028984.1.path1;transcripts=FBgn0028984.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101807331	101808703	.	+	.	ID=FBgn0028984.1.mrna1;geneID=FBgn0028984.1.path1;Name=FBgn0028984.1;Dir=sensecoverage=100.0;identity=99.9;matches=1295;mismatches=0;indels=1;unknowns=0;Target=FBgn0028984.1 3 23 +;locus=RLOC_00020041
Chr2	stalkie_big_nohaplotig	exon	101807331	101808337	99	+	.	Parent=FBgn0028984.1.mrna1;Target=FBgn0028984.1 1 1008 +
Chr2	stalkie_big_nohaplotig	exon	101808416	101808703	100	+	.	Parent=FBgn0028984.1.mrna1;Target=FBgn0028984.1 1009 1296 +
Chr2	stalkie_big_nohaplotig	CDS	101807333	101807352	.	+	0	Parent=FBgn0028984.1.mrna1
Chr2	gffcl	locus	101810805	101823600	.	-	.	ID=RLOC_00020042;geneIDs=FBgn0260659.1.path1;transcripts=FBgn0260659.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101810805	101823600	.	-	.	ID=FBgn0260659.1.mrna1;geneID=FBgn0260659.1.path1;Name=FBgn0260659.1;Dir=sensecoverage=100.0;identity=99.9;matches=812;mismatches=0;indels=1;unknowns=0;locus=RLOC_00020042
Chr2	stalkie_big_nohaplotig	exon	101810805	101810981	100	-	.	Parent=FBgn0260659.1.mrna1;Target=FBgn0260659.1 637 813 +
Chr2	stalkie_big_nohaplotig	exon	101813486	101813668	100	-	.	Parent=FBgn0260659.1.mrna1;Target=FBgn0260659.1 454 636 +
Chr2	stalkie_big_nohaplotig	exon	101823086	101823523	99	-	.	Parent=FBgn0260659.1.mrna1;Target=FBgn0260659.1 15 453 +
Chr2	stalkie_big_nohaplotig	exon	101823587	101823600	100	-	.	Parent=FBgn0260659.1.mrna1;Target=FBgn0260659.1 1 14 +
Chr2	stalkie_big_nohaplotig	CDS	101823447	101823523	.	-	0	Parent=FBgn0260659.1.mrna1;Target=FBgn0260659.1 15 92 +
Chr2	stalkie_big_nohaplotig	CDS	101823587	101823598	.	-	0	Parent=FBgn0260659.1.mrna1;Target=FBgn0260659.1 3 14 +
Chr2	gffcl	locus	101840301	101851419	.	-	.	ID=RLOC_00020043;geneIDs=FBgn0038279.1.path1;transcripts=FBgn0038279.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101840301	101851419	.	-	.	ID=FBgn0038279.1.mrna1;geneID=FBgn0038279.1.path1;Name=FBgn0038279.1;Dir=sensecoverage=100.0;identity=100.0;matches=2703;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020043
Chr2	stalkie_big_nohaplotig	exon	101840301	101840811	100	-	.	Parent=FBgn0038279.1.mrna1;Target=FBgn0038279.1 2193 2703 +
Chr2	stalkie_big_nohaplotig	exon	101843206	101843377	100	-	.	Parent=FBgn0038279.1.mrna1;Target=FBgn0038279.1 2021 2192 +
Chr2	stalkie_big_nohaplotig	exon	101843438	101843525	100	-	.	Parent=FBgn0038279.1.mrna1;Target=FBgn0038279.1 1933 2020 +
Chr2	stalkie_big_nohaplotig	exon	101843578	101843794	100	-	.	Parent=FBgn0038279.1.mrna1;Target=FBgn0038279.1 1716 1932 +
Chr2	stalkie_big_nohaplotig	exon	101843867	101844053	100	-	.	Parent=FBgn0038279.1.mrna1;Target=FBgn0038279.1 1529 1715 +
Chr2	stalkie_big_nohaplotig	exon	101844127	101844335	100	-	.	Parent=FBgn0038279.1.mrna1;Target=FBgn0038279.1 1320 1528 +
Chr2	stalkie_big_nohaplotig	exon	101844663	101844810	100	-	.	Parent=FBgn0038279.1.mrna1;Target=FBgn0038279.1 1172 1319 +
Chr2	stalkie_big_nohaplotig	exon	101844865	101845108	100	-	.	Parent=FBgn0038279.1.mrna1;Target=FBgn0038279.1 928 1171 +
Chr2	stalkie_big_nohaplotig	exon	101847503	101847805	100	-	.	Parent=FBgn0038279.1.mrna1;Target=FBgn0038279.1 625 927 +
Chr2	stalkie_big_nohaplotig	exon	101850796	101851419	100	-	.	Parent=FBgn0038279.1.mrna1;Target=FBgn0038279.1 1 624 +
Chr2	stalkie_big_nohaplotig	CDS	101840301	101840811	.	-	1	Parent=FBgn0038279.1.mrna1;Target=FBgn0038279.1 2193 2703 +
Chr2	stalkie_big_nohaplotig	CDS	101843206	101843377	.	-	2	Parent=FBgn0038279.1.mrna1;Target=FBgn0038279.1 2021 2192 +
Chr2	stalkie_big_nohaplotig	CDS	101843438	101843525	.	-	0	Parent=FBgn0038279.1.mrna1;Target=FBgn0038279.1 1933 2020 +
Chr2	stalkie_big_nohaplotig	CDS	101843578	101843794	.	-	1	Parent=FBgn0038279.1.mrna1;Target=FBgn0038279.1 1716 1932 +
Chr2	stalkie_big_nohaplotig	CDS	101843867	101844053	.	-	2	Parent=FBgn0038279.1.mrna1;Target=FBgn0038279.1 1529 1715 +
Chr2	stalkie_big_nohaplotig	CDS	101844127	101844335	.	-	1	Parent=FBgn0038279.1.mrna1;Target=FBgn0038279.1 1320 1528 +
Chr2	stalkie_big_nohaplotig	CDS	101844663	101844810	.	-	2	Parent=FBgn0038279.1.mrna1;Target=FBgn0038279.1 1172 1319 +
Chr2	stalkie_big_nohaplotig	CDS	101844865	101845108	.	-	0	Parent=FBgn0038279.1.mrna1;Target=FBgn0038279.1 928 1171 +
Chr2	stalkie_big_nohaplotig	CDS	101847503	101847805	.	-	0	Parent=FBgn0038279.1.mrna1;Target=FBgn0038279.1 625 927 +
Chr2	stalkie_big_nohaplotig	CDS	101850796	101851419	.	-	0	Parent=FBgn0038279.1.mrna1;Target=FBgn0038279.1 1 624 +
Chr2	gffcl	locus	101841316	101841779	.	-	.	ID=RLOC_00020044;geneIDs=comp82898_c0_seq1.path1;transcripts=comp82898_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101841316	101841779	.	-	.	ID=comp82898_c0_seq1.mrna1;geneID=comp82898_c0_seq1.path1;Name=comp82898_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.5;matches=457;mismatches=7;indels=0;unknowns=0;Target=comp82898_c0_seq1 464 1 .;CDS_Target=comp82898_c0_seq1 464 285 .;locus=RLOC_00020044
Chr2	stalkie_big_nohaplotig	exon	101841316	101841779	98	-	.	Parent=comp82898_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101841316	101841495	.	-	0	Parent=comp82898_c0_seq1.mrna1
Chr2	gffcl	locus	101866440	101867898	.	+	.	ID=RLOC_00020046;geneIDs=FBgn0038150.2.path1;transcripts=FBgn0038150.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101866440	101867898	.	+	.	ID=FBgn0038150.2.mrna1;geneID=FBgn0038150.2.path1;Name=FBgn0038150.2;Dir=sensecoverage=100.0;identity=100.0;matches=1209;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020046
Chr2	stalkie_big_nohaplotig	exon	101866440	101866668	100	+	.	Parent=FBgn0038150.2.mrna1;Target=FBgn0038150.2 1 229 +
Chr2	stalkie_big_nohaplotig	exon	101866737	101866918	100	+	.	Parent=FBgn0038150.2.mrna1;Target=FBgn0038150.2 230 411 +
Chr2	stalkie_big_nohaplotig	exon	101866988	101867363	100	+	.	Parent=FBgn0038150.2.mrna1;Target=FBgn0038150.2 412 787 +
Chr2	stalkie_big_nohaplotig	exon	101867424	101867791	100	+	.	Parent=FBgn0038150.2.mrna1;Target=FBgn0038150.2 788 1155 +
Chr2	stalkie_big_nohaplotig	exon	101867845	101867898	100	+	.	Parent=FBgn0038150.2.mrna1;Target=FBgn0038150.2 1156 1209 +
Chr2	stalkie_big_nohaplotig	CDS	101866440	101866668	.	+	0	Parent=FBgn0038150.2.mrna1;Target=FBgn0038150.2 1 229 +
Chr2	stalkie_big_nohaplotig	CDS	101866737	101866918	.	+	2	Parent=FBgn0038150.2.mrna1;Target=FBgn0038150.2 230 411 +
Chr2	stalkie_big_nohaplotig	CDS	101866988	101867363	.	+	0	Parent=FBgn0038150.2.mrna1;Target=FBgn0038150.2 412 787 +
Chr2	stalkie_big_nohaplotig	CDS	101867424	101867791	.	+	2	Parent=FBgn0038150.2.mrna1;Target=FBgn0038150.2 788 1155 +
Chr2	stalkie_big_nohaplotig	CDS	101867845	101867898	.	+	0	Parent=FBgn0038150.2.mrna1;Target=FBgn0038150.2 1156 1209 +
Chr2	gffcl	locus	101895838	101896364	.	-	.	ID=RLOC_00020048;geneIDs=comp117847_c0_seq1.path1;transcripts=comp117847_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101895838	101896364	.	-	.	ID=comp117847_c0_seq1.mrna1;geneID=comp117847_c0_seq1.path1;Name=comp117847_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=527;mismatches=0;indels=0;unknowns=0;Target=comp117847_c0_seq1 528 2 .;CDS_Target=comp117847_c0_seq1 293 147 .;locus=RLOC_00020048
Chr2	stalkie_big_nohaplotig	exon	101895838	101896364	100	-	.	Parent=comp117847_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101896073	101896219	.	-	0	Parent=comp117847_c0_seq1.mrna1
Chr2	gffcl	locus	101942680	101943156	.	+	.	ID=RLOC_00020049;geneIDs=FBgn0000253.18.path1;transcripts=FBgn0000253.18.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101942680	101943156	.	+	.	ID=FBgn0000253.18.mrna1;geneID=FBgn0000253.18.path1;Name=FBgn0000253.18;Dir=indeterminatecoverage=100.0;identity=100.0;matches=477;mismatches=0;indels=0;unknowns=0;Target=FBgn0000253.18 477 1 .;locus=RLOC_00020049
Chr2	stalkie_big_nohaplotig	exon	101942680	101943156	100	+	.	Parent=FBgn0000253.18.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101942680	101943156	.	+	0	Parent=FBgn0000253.18.mrna1
Chr2	gffcl	locus	101944649	101945101	.	+	.	ID=RLOC_00020050;geneIDs=FBgn0000253.9.path1;transcripts=FBgn0000253.9.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101944649	101945101	.	+	.	ID=FBgn0000253.9.mrna1;geneID=FBgn0000253.9.path1;Name=FBgn0000253.9;Dir=indeterminatecoverage=100.0;identity=100.0;matches=453;mismatches=0;indels=0;unknowns=0;Target=FBgn0000253.9 453 1 .;locus=RLOC_00020050
Chr2	stalkie_big_nohaplotig	exon	101944649	101945101	100	+	.	Parent=FBgn0000253.9.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101944649	101945101	.	+	0	Parent=FBgn0000253.9.mrna1
Chr2	gffcl	locus	101945435	101945986	.	+	.	ID=RLOC_00020051;geneIDs=FBgn0000253.10.path1;transcripts=FBgn0000253.10.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101945435	101945986	.	+	.	ID=FBgn0000253.10.mrna1;geneID=FBgn0000253.10.path1;Name=FBgn0000253.10;Dir=sensecoverage=100.0;identity=100.0;matches=495;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020051
Chr2	stalkie_big_nohaplotig	exon	101945435	101945473	100	+	.	Parent=FBgn0000253.10.mrna1;Target=FBgn0000253.10 1 39 +
Chr2	stalkie_big_nohaplotig	exon	101945531	101945986	100	+	.	Parent=FBgn0000253.10.mrna1;Target=FBgn0000253.10 40 495 +
Chr2	stalkie_big_nohaplotig	CDS	101945435	101945473	.	+	0	Parent=FBgn0000253.10.mrna1;Target=FBgn0000253.10 1 39 +
Chr2	stalkie_big_nohaplotig	CDS	101945531	101945986	.	+	0	Parent=FBgn0000253.10.mrna1;Target=FBgn0000253.10 40 495 +
Chr2	gffcl	locus	101957395	101958110	.	+	.	ID=RLOC_00020052;geneIDs=comp146200_c0_seq1.path1;transcripts=comp146200_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	101957395	101958110	.	+	.	ID=comp146200_c0_seq1.mrna1;geneID=comp146200_c0_seq1.path1;Name=comp146200_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.7;matches=714;mismatches=2;indels=0;unknowns=0;Target=comp146200_c0_seq1 716 1 .;CDS_Target=comp146200_c0_seq1 637 416 .;locus=RLOC_00020052
Chr2	stalkie_big_nohaplotig	exon	101957395	101958110	99	+	.	Parent=comp146200_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	101957810	101958031	.	+	0	Parent=comp146200_c0_seq1.mrna1
Chr2	gffcl	locus	102293773	102295643	.	+	.	ID=RLOC_00020055;geneIDs=FBgn0038685.2.path1;transcripts=FBgn0038685.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102293773	102295643	.	+	.	ID=FBgn0038685.2.mrna1;geneID=FBgn0038685.2.path1;Name=FBgn0038685.2;Dir=sensecoverage=100.0;identity=100.0;matches=804;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020055
Chr2	stalkie_big_nohaplotig	exon	102293773	102294391	100	+	.	Parent=FBgn0038685.2.mrna1;Target=FBgn0038685.2 1 619 +
Chr2	stalkie_big_nohaplotig	exon	102295459	102295643	100	+	.	Parent=FBgn0038685.2.mrna1;Target=FBgn0038685.2 620 804 +
Chr2	stalkie_big_nohaplotig	CDS	102293773	102294391	.	+	0	Parent=FBgn0038685.2.mrna1;Target=FBgn0038685.2 1 619 +
Chr2	stalkie_big_nohaplotig	CDS	102295459	102295643	.	+	2	Parent=FBgn0038685.2.mrna1;Target=FBgn0038685.2 620 804 +
Chr2	gffcl	locus	102299511	102301787	.	+	.	ID=RLOC_00020056;geneIDs=comp126473_c0_seq1.path1;transcripts=comp126473_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102299511	102301787	.	+	.	ID=comp126473_c0_seq1.mrna1;geneID=comp126473_c0_seq1.path1;Name=comp126473_c0_seq1;Dir=antisensecoverage=95.9;identity=100.0;matches=702;mismatches=0;indels=0;unknowns=0;Target=comp126473_c0_seq1 498 731 .;locus=RLOC_00020056
Chr2	stalkie_big_nohaplotig	exon	102299511	102299745	100	+	.	Parent=comp126473_c0_seq1.mrna1;Target=comp126473_c0_seq1 498 732 -
Chr2	stalkie_big_nohaplotig	exon	102299806	102299854	100	+	.	Parent=comp126473_c0_seq1.mrna1;Target=comp126473_c0_seq1 449 497 -
Chr2	stalkie_big_nohaplotig	exon	102301292	102301585	100	+	.	Parent=comp126473_c0_seq1.mrna1;Target=comp126473_c0_seq1 155 448 -
Chr2	stalkie_big_nohaplotig	exon	102301664	102301787	100	+	.	Parent=comp126473_c0_seq1.mrna1;Target=comp126473_c0_seq1 31 154 -
Chr2	stalkie_big_nohaplotig	CDS	102299512	102299745	.	+	0	Parent=comp126473_c0_seq1.mrna1
Chr2	gffcl	locus	102383911	102385440	.	-	.	ID=RLOC_00020057;geneIDs=comp162458_c2_seq1.path2;transcripts=comp162458_c2_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	102383911	102385440	.	-	.	ID=comp162458_c2_seq1.mrna2;geneID=comp162458_c2_seq1.path2;Name=comp162458_c2_seq1;Dir=indeterminatecoverage=99.0;identity=94.1;matches=1440;mismatches=90;indels=1;unknowns=0;Target=comp162458_c2_seq1 1531 1 .;CDS_Target=comp162458_c2_seq1 1465 1298 .;locus=RLOC_00020057
Chr2	stalkie_big_nohaplotig	exon	102383911	102385440	94	-	.	Parent=comp162458_c2_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	102383977	102384144	.	-	0	Parent=comp162458_c2_seq1.mrna2
Chr2	gffcl	locus	102491633	102502775	.	-	.	ID=RLOC_00020058;geneIDs=FBgn0038282.1.path1;transcripts=FBgn0038282.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102491633	102502775	.	-	.	ID=FBgn0038282.1.mrna1;geneID=FBgn0038282.1.path1;Name=FBgn0038282.1;Dir=sensecoverage=100.0;identity=100.0;matches=1305;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020058
Chr2	stalkie_big_nohaplotig	exon	102491633	102492123	100	-	.	Parent=FBgn0038282.1.mrna1;Target=FBgn0038282.1 815 1305 +
Chr2	stalkie_big_nohaplotig	exon	102493715	102493883	100	-	.	Parent=FBgn0038282.1.mrna1;Target=FBgn0038282.1 646 814 +
Chr2	stalkie_big_nohaplotig	exon	102496152	102496279	100	-	.	Parent=FBgn0038282.1.mrna1;Target=FBgn0038282.1 518 645 +
Chr2	stalkie_big_nohaplotig	exon	102496388	102496610	100	-	.	Parent=FBgn0038282.1.mrna1;Target=FBgn0038282.1 295 517 +
Chr2	stalkie_big_nohaplotig	exon	102502482	102502775	100	-	.	Parent=FBgn0038282.1.mrna1;Target=FBgn0038282.1 1 294 +
Chr2	stalkie_big_nohaplotig	CDS	102491633	102492123	.	-	2	Parent=FBgn0038282.1.mrna1;Target=FBgn0038282.1 815 1305 +
Chr2	stalkie_big_nohaplotig	CDS	102493715	102493883	.	-	0	Parent=FBgn0038282.1.mrna1;Target=FBgn0038282.1 646 814 +
Chr2	stalkie_big_nohaplotig	CDS	102496152	102496279	.	-	2	Parent=FBgn0038282.1.mrna1;Target=FBgn0038282.1 518 645 +
Chr2	stalkie_big_nohaplotig	CDS	102496388	102496610	.	-	0	Parent=FBgn0038282.1.mrna1;Target=FBgn0038282.1 295 517 +
Chr2	stalkie_big_nohaplotig	CDS	102502482	102502775	.	-	0	Parent=FBgn0038282.1.mrna1;Target=FBgn0038282.1 1 294 +
Chr2	gffcl	locus	102529457	102532371	.	.	.	ID=RLOC_00020059;geneIDs=FBgn0038286.1.path1,comp117538_c0_seq1.path1;transcripts=FBgn0038286.1.mrna1,comp117538_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102529457	102532371	.	-	.	ID=FBgn0038286.1.mrna1;geneID=FBgn0038286.1.path1;Name=FBgn0038286.1;Dir=sensecoverage=95.7;identity=100.0;matches=1851;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020059
Chr2	stalkie_big_nohaplotig	exon	102529457	102529639	100	-	.	Parent=FBgn0038286.1.mrna1;Target=FBgn0038286.1 1753 1935 +
Chr2	stalkie_big_nohaplotig	exon	102529699	102530150	100	-	.	Parent=FBgn0038286.1.mrna1;Target=FBgn0038286.1 1301 1752 +
Chr2	stalkie_big_nohaplotig	exon	102530219	102530472	100	-	.	Parent=FBgn0038286.1.mrna1;Target=FBgn0038286.1 1047 1300 +
Chr2	stalkie_big_nohaplotig	exon	102531349	102531949	100	-	.	Parent=FBgn0038286.1.mrna1;Target=FBgn0038286.1 446 1046 +
Chr2	stalkie_big_nohaplotig	exon	102532011	102532371	100	-	.	Parent=FBgn0038286.1.mrna1;Target=FBgn0038286.1 85 445 +
Chr2	stalkie_big_nohaplotig	CDS	102529457	102529639	.	-	0	Parent=FBgn0038286.1.mrna1;Target=FBgn0038286.1 1753 1935 +
Chr2	stalkie_big_nohaplotig	CDS	102529699	102530150	.	-	2	Parent=FBgn0038286.1.mrna1;Target=FBgn0038286.1 1301 1752 +
Chr2	stalkie_big_nohaplotig	CDS	102530219	102530472	.	-	1	Parent=FBgn0038286.1.mrna1;Target=FBgn0038286.1 1047 1300 +
Chr2	stalkie_big_nohaplotig	CDS	102531349	102531949	.	-	2	Parent=FBgn0038286.1.mrna1;Target=FBgn0038286.1 446 1046 +
Chr2	stalkie_big_nohaplotig	CDS	102532011	102532371	.	-	0	Parent=FBgn0038286.1.mrna1;Target=FBgn0038286.1 85 445 +
Chr2	stalkie_big_nohaplotig	mRNA	102530455	102531372	.	+	.	ID=comp117538_c0_seq1.mrna1;geneID=comp117538_c0_seq1.path1;Name=comp117538_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=918;mismatches=0;indels=0;unknowns=0;Target=comp117538_c0_seq1 918 1 .;CDS_Target=comp117538_c0_seq1 128 3 .;locus=RLOC_00020059
Chr2	stalkie_big_nohaplotig	exon	102530455	102531372	100	+	.	Parent=comp117538_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	102530457	102530582	.	+	0	Parent=comp117538_c0_seq1.mrna1
Chr2	gffcl	locus	102554490	102555554	.	+	.	ID=RLOC_00020060;geneIDs=comp149684_c0_seq1.path1;transcripts=comp149684_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102554490	102555554	.	+	.	ID=comp149684_c0_seq1.mrna1;geneID=comp149684_c0_seq1.path1;Name=comp149684_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1065;mismatches=0;indels=1;unknowns=0;Target=comp149684_c0_seq1 1066 1 .;CDS_Target=comp149684_c0_seq1 604 581 .;locus=RLOC_00020060
Chr2	stalkie_big_nohaplotig	exon	102554490	102555554	99	+	.	Parent=comp149684_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	102555070	102555092	.	+	0	Parent=comp149684_c0_seq1.mrna1
Chr2	gffcl	locus	102578081	102580414	.	+	.	ID=RLOC_00020062;geneIDs=comp162540_c1_seq1.path1;transcripts=comp162540_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102578081	102580414	.	+	.	ID=comp162540_c1_seq1.mrna1;geneID=comp162540_c1_seq1.path1;Name=comp162540_c1_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=2038;mismatches=3;indels=0;unknowns=0;Target=comp162540_c1_seq1 1535 1756 .;locus=RLOC_00020062
Chr2	stalkie_big_nohaplotig	exon	102578081	102578307	99	+	.	Parent=comp162540_c1_seq1.mrna1;Target=comp162540_c1_seq1 1815 2041 -
Chr2	stalkie_big_nohaplotig	exon	102578601	102580414	99	+	.	Parent=comp162540_c1_seq1.mrna1;Target=comp162540_c1_seq1 1 1814 -
Chr2	stalkie_big_nohaplotig	CDS	102578659	102578880	.	+	0	Parent=comp162540_c1_seq1.mrna1
Chr2	gffcl	locus	102631413	102633606	.	+	.	ID=RLOC_00020064;geneIDs=FBgn0038292.1.path1;transcripts=FBgn0038292.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102631413	102633606	.	+	.	ID=FBgn0038292.1.mrna1;geneID=FBgn0038292.1.path1;Name=FBgn0038292.1;Dir=sensecoverage=100.0;identity=99.0;matches=1351;mismatches=2;indels=12;unknowns=0;locus=RLOC_00020064
Chr2	stalkie_big_nohaplotig	exon	102631413	102631469	100	+	.	Parent=FBgn0038292.1.mrna1;Target=FBgn0038292.1 1 57 +
Chr2	stalkie_big_nohaplotig	exon	102632305	102633606	98	+	.	Parent=FBgn0038292.1.mrna1;Target=FBgn0038292.1 58 1359 +
Chr2	stalkie_big_nohaplotig	CDS	102631413	102631469	.	+	0	Parent=FBgn0038292.1.mrna1;Target=FBgn0038292.1 1 57 +
Chr2	stalkie_big_nohaplotig	CDS	102632305	102633606	.	+	0	Parent=FBgn0038292.1.mrna1;Target=FBgn0038292.1 58 1359 +
Chr2	gffcl	locus	102634300	102640663	.	-	.	ID=RLOC_00020065;geneIDs=FBgn0038293.1.path1;transcripts=FBgn0038293.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102634300	102640663	.	-	.	ID=FBgn0038293.1.mrna1;geneID=FBgn0038293.1.path1;Name=FBgn0038293.1;Dir=sensecoverage=100.0;identity=100.0;matches=2187;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020065
Chr2	stalkie_big_nohaplotig	exon	102634300	102634388	100	-	.	Parent=FBgn0038293.1.mrna1;Target=FBgn0038293.1 2099 2187 +
Chr2	stalkie_big_nohaplotig	exon	102634459	102634594	100	-	.	Parent=FBgn0038293.1.mrna1;Target=FBgn0038293.1 1963 2098 +
Chr2	stalkie_big_nohaplotig	exon	102638354	102638818	100	-	.	Parent=FBgn0038293.1.mrna1;Target=FBgn0038293.1 1498 1962 +
Chr2	stalkie_big_nohaplotig	exon	102638878	102639280	100	-	.	Parent=FBgn0038293.1.mrna1;Target=FBgn0038293.1 1095 1497 +
Chr2	stalkie_big_nohaplotig	exon	102639347	102639819	100	-	.	Parent=FBgn0038293.1.mrna1;Target=FBgn0038293.1 622 1094 +
Chr2	stalkie_big_nohaplotig	exon	102639880	102639953	100	-	.	Parent=FBgn0038293.1.mrna1;Target=FBgn0038293.1 548 621 +
Chr2	stalkie_big_nohaplotig	exon	102640028	102640454	100	-	.	Parent=FBgn0038293.1.mrna1;Target=FBgn0038293.1 121 547 +
Chr2	stalkie_big_nohaplotig	exon	102640544	102640663	100	-	.	Parent=FBgn0038293.1.mrna1;Target=FBgn0038293.1 1 120 +
Chr2	stalkie_big_nohaplotig	CDS	102634300	102634388	.	-	2	Parent=FBgn0038293.1.mrna1;Target=FBgn0038293.1 2099 2187 +
Chr2	stalkie_big_nohaplotig	CDS	102634459	102634594	.	-	0	Parent=FBgn0038293.1.mrna1;Target=FBgn0038293.1 1963 2098 +
Chr2	stalkie_big_nohaplotig	CDS	102638354	102638818	.	-	0	Parent=FBgn0038293.1.mrna1;Target=FBgn0038293.1 1498 1962 +
Chr2	stalkie_big_nohaplotig	CDS	102638878	102639280	.	-	1	Parent=FBgn0038293.1.mrna1;Target=FBgn0038293.1 1095 1497 +
Chr2	stalkie_big_nohaplotig	CDS	102639347	102639819	.	-	0	Parent=FBgn0038293.1.mrna1;Target=FBgn0038293.1 622 1094 +
Chr2	stalkie_big_nohaplotig	CDS	102639880	102639953	.	-	2	Parent=FBgn0038293.1.mrna1;Target=FBgn0038293.1 548 621 +
Chr2	stalkie_big_nohaplotig	CDS	102640028	102640454	.	-	0	Parent=FBgn0038293.1.mrna1;Target=FBgn0038293.1 121 547 +
Chr2	stalkie_big_nohaplotig	CDS	102640544	102640663	.	-	0	Parent=FBgn0038293.1.mrna1;Target=FBgn0038293.1 1 120 +
Chr2	gffcl	locus	102634819	102635410	.	-	.	ID=RLOC_00020066;geneIDs=comp144775_c0_seq1.path1;transcripts=comp144775_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102634819	102635410	.	-	.	ID=comp144775_c0_seq1.mrna1;geneID=comp144775_c0_seq1.path1;Name=comp144775_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=591;mismatches=1;indels=0;unknowns=0;Target=comp144775_c0_seq1 592 1 .;CDS_Target=comp144775_c0_seq1 389 276 .;locus=RLOC_00020066
Chr2	stalkie_big_nohaplotig	exon	102634819	102635410	99	-	.	Parent=comp144775_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	102635022	102635135	.	-	0	Parent=comp144775_c0_seq1.mrna1
Chr2	gffcl	locus	102636757	102637685	.	-	.	ID=RLOC_00020067;geneIDs=comp140398_c1_seq1.path1;transcripts=comp140398_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102636757	102637685	.	-	.	ID=comp140398_c1_seq1.mrna1;geneID=comp140398_c1_seq1.path1;Name=comp140398_c1_seq1;Dir=indeterminatecoverage=98.9;identity=99.7;matches=926;mismatches=3;indels=0;unknowns=0;Target=comp140398_c1_seq1 929 1 .;CDS_Target=comp140398_c1_seq1 538 407 .;locus=RLOC_00020067
Chr2	stalkie_big_nohaplotig	exon	102636757	102637685	99	-	.	Parent=comp140398_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	102637148	102637279	.	-	0	Parent=comp140398_c1_seq1.mrna1
Chr2	gffcl	locus	102647395	102647710	.	+	.	ID=RLOC_00020068;geneIDs=comp213346_c0_seq1.path1;transcripts=comp213346_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102647395	102647710	.	+	.	ID=comp213346_c0_seq1.mrna1;geneID=comp213346_c0_seq1.path1;Name=comp213346_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=316;mismatches=0;indels=0;unknowns=0;Target=comp213346_c0_seq1 316 1 .;CDS_Target=comp213346_c0_seq1 209 3 .;locus=RLOC_00020068
Chr2	stalkie_big_nohaplotig	exon	102647395	102647710	100	+	.	Parent=comp213346_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	102647397	102647603	.	+	0	Parent=comp213346_c0_seq1.mrna1
Chr2	gffcl	locus	102662502	102663047	.	-	.	ID=RLOC_00020069;geneIDs=comp106984_c0_seq1.path1;transcripts=comp106984_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102662502	102663047	.	-	.	ID=comp106984_c0_seq1.mrna1;geneID=comp106984_c0_seq1.path1;Name=comp106984_c0_seq1;Dir=sensecoverage=99.1;identity=99.5;matches=438;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020069
Chr2	stalkie_big_nohaplotig	exon	102662502	102662891	99	-	.	Parent=comp106984_c0_seq1.mrna1;Target=comp106984_c0_seq1 55 444 +
Chr2	stalkie_big_nohaplotig	exon	102662998	102663047	100	-	.	Parent=comp106984_c0_seq1.mrna1;Target=comp106984_c0_seq1 5 54 +
Chr2	stalkie_big_nohaplotig	CDS	102662502	102662891	.	-	0	Parent=comp106984_c0_seq1.mrna1;Target=comp106984_c0_seq1 55 444 +
Chr2	stalkie_big_nohaplotig	CDS	102662998	102663045	.	-	0	Parent=comp106984_c0_seq1.mrna1;Target=comp106984_c0_seq1 7 54 +
Chr2	gffcl	locus	102694084	102695201	.	-	.	ID=RLOC_00020070;geneIDs=comp154055_c0_seq1.path1;transcripts=comp154055_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102694084	102695201	.	-	.	ID=comp154055_c0_seq1.mrna1;geneID=comp154055_c0_seq1.path1;Name=comp154055_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.6;matches=1115;mismatches=3;indels=1;unknowns=0;Target=comp154055_c0_seq1 1122 4 .;CDS_Target=comp154055_c0_seq1 828 679 .;locus=RLOC_00020070
Chr2	stalkie_big_nohaplotig	exon	102694084	102695201	99	-	.	Parent=comp154055_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	102694378	102694527	.	-	0	Parent=comp154055_c0_seq1.mrna1
Chr2	gffcl	locus	102695336	102696133	.	-	.	ID=RLOC_00020071;geneIDs=comp145104_c0_seq1.path1;transcripts=comp145104_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102695336	102696133	.	-	.	ID=comp145104_c0_seq1.mrna1;geneID=comp145104_c0_seq1.path1;Name=comp145104_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.6;matches=796;mismatches=2;indels=1;unknowns=0;Target=comp145104_c0_seq1 800 2 .;CDS_Target=comp145104_c0_seq1 257 171 .;locus=RLOC_00020071
Chr2	stalkie_big_nohaplotig	exon	102695336	102696133	99	-	.	Parent=comp145104_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	102695878	102695964	.	-	0	Parent=comp145104_c0_seq1.mrna1
Chr2	gffcl	locus	102702498	102705659	.	+	.	ID=RLOC_00020072;geneIDs=comp153970_c0_seq1.path1;transcripts=comp153970_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102702498	102705659	.	+	.	ID=comp153970_c0_seq1.mrna1;geneID=comp153970_c0_seq1.path1;Name=comp153970_c0_seq1;Dir=sensecoverage=99.5;identity=100.0;matches=1609;mismatches=0;indels=0;unknowns=0;Target=comp153970_c0_seq1 288 827 +;locus=RLOC_00020072
Chr2	stalkie_big_nohaplotig	exon	102702498	102703429	100	+	.	Parent=comp153970_c0_seq1.mrna1;Target=comp153970_c0_seq1 9 940 +
Chr2	stalkie_big_nohaplotig	exon	102703499	102703821	100	+	.	Parent=comp153970_c0_seq1.mrna1;Target=comp153970_c0_seq1 941 1263 +
Chr2	stalkie_big_nohaplotig	exon	102705306	102705659	100	+	.	Parent=comp153970_c0_seq1.mrna1;Target=comp153970_c0_seq1 1264 1617 +
Chr2	stalkie_big_nohaplotig	CDS	102702777	102703316	.	+	0	Parent=comp153970_c0_seq1.mrna1
Chr2	gffcl	locus	102771158	102772099	.	+	.	ID=RLOC_00020073;geneIDs=FBgn0035567.1.path1;transcripts=FBgn0035567.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102771158	102772099	.	+	.	ID=FBgn0035567.1.mrna1;geneID=FBgn0035567.1.path1;Name=FBgn0035567.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=941;mismatches=1;indels=0;unknowns=0;Target=FBgn0035567.1 942 1 .;locus=RLOC_00020073
Chr2	stalkie_big_nohaplotig	exon	102771158	102772099	99	+	.	Parent=FBgn0035567.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	102771158	102772099	.	+	0	Parent=FBgn0035567.1.mrna1
Chr2	gffcl	locus	102776532	102777007	.	-	.	ID=RLOC_00020074;geneIDs=FBgn0031971.2.path1;transcripts=FBgn0031971.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102776532	102777007	.	-	.	ID=FBgn0031971.2.mrna1;geneID=FBgn0031971.2.path1;Name=FBgn0031971.2;Dir=sensecoverage=100.0;identity=100.0;matches=399;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020074
Chr2	stalkie_big_nohaplotig	exon	102776532	102776815	100	-	.	Parent=FBgn0031971.2.mrna1;Target=FBgn0031971.2 116 399 +
Chr2	stalkie_big_nohaplotig	exon	102776893	102777007	100	-	.	Parent=FBgn0031971.2.mrna1;Target=FBgn0031971.2 1 115 +
Chr2	stalkie_big_nohaplotig	CDS	102776532	102776815	.	-	2	Parent=FBgn0031971.2.mrna1;Target=FBgn0031971.2 116 399 +
Chr2	stalkie_big_nohaplotig	CDS	102776893	102777007	.	-	0	Parent=FBgn0031971.2.mrna1;Target=FBgn0031971.2 1 115 +
Chr2	gffcl	locus	102803885	102804618	.	-	.	ID=RLOC_00020075;geneIDs=comp142535_c0_seq1.path1;transcripts=comp142535_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102803885	102804618	.	-	.	ID=comp142535_c0_seq1.mrna1;geneID=comp142535_c0_seq1.path1;Name=comp142535_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=732;mismatches=2;indels=0;unknowns=0;Target=comp142535_c0_seq1 734 1 .;CDS_Target=comp142535_c0_seq1 623 444 .;locus=RLOC_00020075
Chr2	stalkie_big_nohaplotig	exon	102803885	102804618	99	-	.	Parent=comp142535_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	102803996	102804175	.	-	0	Parent=comp142535_c0_seq1.mrna1
Chr2	gffcl	locus	102834220	102835203	.	+	.	ID=RLOC_00020076;geneIDs=comp168622_c0_seq1.path1;transcripts=comp168622_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102834220	102835203	.	+	.	ID=comp168622_c0_seq1.mrna1;geneID=comp168622_c0_seq1.path1;Name=comp168622_c0_seq1;Dir=indeterminatecoverage=98.3;identity=100.0;matches=984;mismatches=0;indels=0;unknowns=0;Target=comp168622_c0_seq1 984 1 .;CDS_Target=comp168622_c0_seq1 554 111 .;locus=RLOC_00020076
Chr2	stalkie_big_nohaplotig	exon	102834220	102835203	100	+	.	Parent=comp168622_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	102834330	102834773	.	+	0	Parent=comp168622_c0_seq1.mrna1
Chr2	gffcl	locus	102837248	102839181	.	-	.	ID=RLOC_00020077;geneIDs=ORF805.path1;transcripts=ORF805.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102837248	102839181	.	-	.	ID=ORF805.mrna1;geneID=ORF805.path1;Name=ORF805;Dir=sensecoverage=99.6;identity=99.8;matches=1411;mismatches=3;indels=0;unknowns=0;locus=RLOC_00020077
Chr2	stalkie_big_nohaplotig	exon	102837248	102837704	99	-	.	Parent=ORF805.mrna1;Target=ORF805 963 1419 +
Chr2	stalkie_big_nohaplotig	exon	102837777	102838028	100	-	.	Parent=ORF805.mrna1;Target=ORF805 711 962 +
Chr2	stalkie_big_nohaplotig	exon	102838083	102838172	98	-	.	Parent=ORF805.mrna1;Target=ORF805 621 710 +
Chr2	stalkie_big_nohaplotig	exon	102838230	102838325	100	-	.	Parent=ORF805.mrna1;Target=ORF805 525 620 +
Chr2	stalkie_big_nohaplotig	exon	102838389	102838481	100	-	.	Parent=ORF805.mrna1;Target=ORF805 432 524 +
Chr2	stalkie_big_nohaplotig	exon	102838537	102838632	100	-	.	Parent=ORF805.mrna1;Target=ORF805 336 431 +
Chr2	stalkie_big_nohaplotig	exon	102838690	102838773	100	-	.	Parent=ORF805.mrna1;Target=ORF805 252 335 +
Chr2	stalkie_big_nohaplotig	exon	102838829	102838912	100	-	.	Parent=ORF805.mrna1;Target=ORF805 168 251 +
Chr2	stalkie_big_nohaplotig	exon	102838963	102839046	100	-	.	Parent=ORF805.mrna1;Target=ORF805 84 167 +
Chr2	stalkie_big_nohaplotig	exon	102839104	102839181	100	-	.	Parent=ORF805.mrna1;Target=ORF805 6 83 +
Chr2	stalkie_big_nohaplotig	CDS	102837248	102837704	.	-	1	Parent=ORF805.mrna1;Target=ORF805 963 1419 +
Chr2	stalkie_big_nohaplotig	CDS	102837777	102838028	.	-	1	Parent=ORF805.mrna1;Target=ORF805 711 962 +
Chr2	stalkie_big_nohaplotig	CDS	102838083	102838172	.	-	1	Parent=ORF805.mrna1;Target=ORF805 621 710 +
Chr2	stalkie_big_nohaplotig	CDS	102838230	102838325	.	-	1	Parent=ORF805.mrna1;Target=ORF805 525 620 +
Chr2	stalkie_big_nohaplotig	CDS	102838389	102838481	.	-	1	Parent=ORF805.mrna1;Target=ORF805 432 524 +
Chr2	stalkie_big_nohaplotig	CDS	102838537	102838632	.	-	1	Parent=ORF805.mrna1;Target=ORF805 336 431 +
Chr2	stalkie_big_nohaplotig	CDS	102838690	102838773	.	-	1	Parent=ORF805.mrna1;Target=ORF805 252 335 +
Chr2	stalkie_big_nohaplotig	CDS	102838829	102838912	.	-	1	Parent=ORF805.mrna1;Target=ORF805 168 251 +
Chr2	stalkie_big_nohaplotig	CDS	102838963	102839046	.	-	1	Parent=ORF805.mrna1;Target=ORF805 84 167 +
Chr2	stalkie_big_nohaplotig	CDS	102839104	102839180	.	-	0	Parent=ORF805.mrna1;Target=ORF805 7 83 +
Chr2	gffcl	locus	102916771	102922296	.	-	.	ID=RLOC_00020078;geneIDs=FBgn0038347.1.path1;transcripts=FBgn0038347.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102916771	102922296	.	-	.	ID=FBgn0038347.1.mrna1;geneID=FBgn0038347.1.path1;Name=FBgn0038347.1;Dir=sensecoverage=93.7;identity=98.6;matches=3502;mismatches=49;indels=0;unknowns=0;locus=RLOC_00020078
Chr2	stalkie_big_nohaplotig	exon	102916771	102916949	100	-	.	Parent=FBgn0038347.1.mrna1;Target=FBgn0038347.1 3611 3789 +
Chr2	stalkie_big_nohaplotig	exon	102917015	102917492	99	-	.	Parent=FBgn0038347.1.mrna1;Target=FBgn0038347.1 3133 3610 +
Chr2	stalkie_big_nohaplotig	exon	102917581	102919518	99	-	.	Parent=FBgn0038347.1.mrna1;Target=FBgn0038347.1 1195 3132 +
Chr2	stalkie_big_nohaplotig	exon	102919577	102919810	100	-	.	Parent=FBgn0038347.1.mrna1;Target=FBgn0038347.1 961 1194 +
Chr2	stalkie_big_nohaplotig	exon	102921575	102922296	93	-	.	Parent=FBgn0038347.1.mrna1;Target=FBgn0038347.1 239 960 +
Chr2	stalkie_big_nohaplotig	CDS	102916771	102916949	.	-	2	Parent=FBgn0038347.1.mrna1;Target=FBgn0038347.1 3611 3789 +
Chr2	stalkie_big_nohaplotig	CDS	102917015	102917492	.	-	0	Parent=FBgn0038347.1.mrna1;Target=FBgn0038347.1 3133 3610 +
Chr2	stalkie_big_nohaplotig	CDS	102917581	102919518	.	-	0	Parent=FBgn0038347.1.mrna1;Target=FBgn0038347.1 1195 3132 +
Chr2	stalkie_big_nohaplotig	CDS	102919577	102919810	.	-	0	Parent=FBgn0038347.1.mrna1;Target=FBgn0038347.1 961 1194 +
Chr2	stalkie_big_nohaplotig	CDS	102921575	102922294	.	-	0	Parent=FBgn0038347.1.mrna1;Target=FBgn0038347.1 241 960 +
Chr2	gffcl	locus	102922388	102922694	.	-	.	ID=RLOC_00020079;geneIDs=FBgn0038347.2.path1;transcripts=FBgn0038347.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102922388	102922694	.	-	.	ID=FBgn0038347.2.mrna1;geneID=FBgn0038347.2.path1;Name=FBgn0038347.2;Dir=sensecoverage=5.9;identity=99.1;matches=220;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020079
Chr2	stalkie_big_nohaplotig	exon	102922388	102922560	98	-	.	Parent=FBgn0038347.2.mrna1;Target=FBgn0038347.2 50 222 +
Chr2	stalkie_big_nohaplotig	exon	102922646	102922694	100	-	.	Parent=FBgn0038347.2.mrna1;Target=FBgn0038347.2 1 49 +
Chr2	stalkie_big_nohaplotig	CDS	102922388	102922560	.	-	2	Parent=FBgn0038347.2.mrna1;Target=FBgn0038347.2 50 222 +
Chr2	stalkie_big_nohaplotig	CDS	102922646	102922694	.	-	0	Parent=FBgn0038347.2.mrna1;Target=FBgn0038347.2 1 49 +
Chr2	gffcl	locus	102929104	102929952	.	-	.	ID=RLOC_00020080;geneIDs=FBgn0038349.1.path1;transcripts=FBgn0038349.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	102929104	102929952	.	-	.	ID=FBgn0038349.1.mrna1;geneID=FBgn0038349.1.path1;Name=FBgn0038349.1;Dir=sensecoverage=6.4;identity=99.6;matches=242;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020080
Chr2	stalkie_big_nohaplotig	exon	102929104	102929276	99	-	.	Parent=FBgn0038349.1.mrna1;Target=FBgn0038349.1 71 243 +
Chr2	stalkie_big_nohaplotig	exon	102929883	102929952	100	-	.	Parent=FBgn0038349.1.mrna1;Target=FBgn0038349.1 1 70 +
Chr2	stalkie_big_nohaplotig	CDS	102929104	102929276	.	-	2	Parent=FBgn0038349.1.mrna1;Target=FBgn0038349.1 71 243 +
Chr2	stalkie_big_nohaplotig	CDS	102929883	102929952	.	-	0	Parent=FBgn0038349.1.mrna1;Target=FBgn0038349.1 1 70 +
Chr2	gffcl	locus	102933067	102940236	.	-	.	ID=RLOC_00020081;geneIDs=FBgn0038347.2.path2;transcripts=FBgn0038347.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	102933067	102940236	.	-	.	ID=FBgn0038347.2.mrna2;geneID=FBgn0038347.2.path2;Name=FBgn0038347.2;Dir=sensecoverage=94.1;identity=99.8;matches=3556;mismatches=8;indels=0;unknowns=0;locus=RLOC_00020081
Chr2	stalkie_big_nohaplotig	exon	102933067	102933242	100	-	.	Parent=FBgn0038347.2.mrna2;Target=FBgn0038347.2 3611 3786 +
Chr2	stalkie_big_nohaplotig	exon	102933309	102933786	100	-	.	Parent=FBgn0038347.2.mrna2;Target=FBgn0038347.2 3133 3610 +
Chr2	stalkie_big_nohaplotig	exon	102933882	102935819	100	-	.	Parent=FBgn0038347.2.mrna2;Target=FBgn0038347.2 1195 3132 +
Chr2	stalkie_big_nohaplotig	exon	102935898	102936131	100	-	.	Parent=FBgn0038347.2.mrna2;Target=FBgn0038347.2 961 1194 +
Chr2	stalkie_big_nohaplotig	exon	102939499	102940236	98	-	.	Parent=FBgn0038347.2.mrna2;Target=FBgn0038347.2 223 960 +
Chr2	stalkie_big_nohaplotig	CDS	102933067	102933242	.	-	2	Parent=FBgn0038347.2.mrna2;Target=FBgn0038347.2 3611 3786 +
Chr2	stalkie_big_nohaplotig	CDS	102933309	102933786	.	-	0	Parent=FBgn0038347.2.mrna2;Target=FBgn0038347.2 3133 3610 +
Chr2	stalkie_big_nohaplotig	CDS	102933882	102935819	.	-	0	Parent=FBgn0038347.2.mrna2;Target=FBgn0038347.2 1195 3132 +
Chr2	stalkie_big_nohaplotig	CDS	102935898	102936131	.	-	0	Parent=FBgn0038347.2.mrna2;Target=FBgn0038347.2 961 1194 +
Chr2	stalkie_big_nohaplotig	CDS	102939499	102940236	.	-	0	Parent=FBgn0038347.2.mrna2;Target=FBgn0038347.2 223 960 +
Chr2	gffcl	locus	102944232	102949399	.	-	.	ID=RLOC_00020082;geneIDs=FBgn0038349.1.path2;transcripts=FBgn0038349.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	102944232	102949399	.	-	.	ID=FBgn0038349.1.mrna2;geneID=FBgn0038349.1.path2;Name=FBgn0038349.1;Dir=sensecoverage=93.6;identity=97.2;matches=3457;mismatches=101;indels=0;unknowns=0;locus=RLOC_00020082
Chr2	stalkie_big_nohaplotig	exon	102944232	102945034	100	-	.	Parent=FBgn0038349.1.mrna2;Target=FBgn0038349.1 2999 3801 +
Chr2	stalkie_big_nohaplotig	exon	102945153	102945473	100	-	.	Parent=FBgn0038349.1.mrna2;Target=FBgn0038349.1 2678 2998 +
Chr2	stalkie_big_nohaplotig	exon	102945546	102946574	99	-	.	Parent=FBgn0038349.1.mrna2;Target=FBgn0038349.1 1649 2677 +
Chr2	stalkie_big_nohaplotig	exon	102946633	102947074	99	-	.	Parent=FBgn0038349.1.mrna2;Target=FBgn0038349.1 1207 1648 +
Chr2	stalkie_big_nohaplotig	exon	102948376	102948609	98	-	.	Parent=FBgn0038349.1.mrna2;Target=FBgn0038349.1 973 1206 +
Chr2	stalkie_big_nohaplotig	exon	102948671	102949399	87	-	.	Parent=FBgn0038349.1.mrna2;Target=FBgn0038349.1 244 972 +
Chr2	stalkie_big_nohaplotig	CDS	102944232	102945034	.	-	2	Parent=FBgn0038349.1.mrna2;Target=FBgn0038349.1 2999 3801 +
Chr2	stalkie_big_nohaplotig	CDS	102945153	102945473	.	-	2	Parent=FBgn0038349.1.mrna2;Target=FBgn0038349.1 2678 2998 +
Chr2	stalkie_big_nohaplotig	CDS	102945546	102946574	.	-	2	Parent=FBgn0038349.1.mrna2;Target=FBgn0038349.1 1649 2677 +
Chr2	stalkie_big_nohaplotig	CDS	102946633	102947074	.	-	0	Parent=FBgn0038349.1.mrna2;Target=FBgn0038349.1 1207 1648 +
Chr2	stalkie_big_nohaplotig	CDS	102948376	102948609	.	-	0	Parent=FBgn0038349.1.mrna2;Target=FBgn0038349.1 973 1206 +
Chr2	stalkie_big_nohaplotig	CDS	102948671	102949399	.	-	0	Parent=FBgn0038349.1.mrna2;Target=FBgn0038349.1 244 972 +
Chr2	gffcl	locus	103030011	103031009	.	+	.	ID=RLOC_00020083;geneIDs=ORF1771.path1;transcripts=ORF1771.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103030011	103031009	.	+	.	ID=ORF1771.mrna1;geneID=ORF1771.path1;Name=ORF1771;Dir=indeterminatecoverage=100.0;identity=99.9;matches=998;mismatches=1;indels=0;unknowns=0;Target=ORF1771 999 1 .;locus=RLOC_00020083
Chr2	stalkie_big_nohaplotig	exon	103030011	103031009	99	+	.	Parent=ORF1771.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103030011	103031009	.	+	0	Parent=ORF1771.mrna1
Chr2	gffcl	locus	103052939	103053599	.	+	.	ID=RLOC_00020084;geneIDs=comp158896_c0_seq1.path1;transcripts=comp158896_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103052939	103053599	.	+	.	ID=comp158896_c0_seq1.mrna1;geneID=comp158896_c0_seq1.path1;Name=comp158896_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.5;matches=618;mismatches=14;indels=29;unknowns=0;Target=comp158896_c0_seq1 632 1 .;CDS_Target=comp158896_c0_seq1 222 130 .;locus=RLOC_00020084
Chr2	stalkie_big_nohaplotig	exon	103052939	103053599	93	+	.	Parent=comp158896_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103053097	103053189	.	+	0	Parent=comp158896_c0_seq1.mrna1
Chr2	gffcl	locus	103108787	103109168	.	+	.	ID=RLOC_00020085;geneIDs=comp113214_c0_seq1.path1;transcripts=comp113214_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103108787	103109168	.	+	.	ID=comp113214_c0_seq1.mrna1;geneID=comp113214_c0_seq1.path1;Name=comp113214_c0_seq1;Dir=indeterminatecoverage=92.0;identity=100.0;matches=382;mismatches=0;indels=0;unknowns=0;Target=comp113214_c0_seq1 395 14 .;CDS_Target=comp113214_c0_seq1 163 71 .;locus=RLOC_00020085
Chr2	stalkie_big_nohaplotig	exon	103108787	103109168	100	+	.	Parent=comp113214_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103108844	103108936	.	+	0	Parent=comp113214_c0_seq1.mrna1
Chr2	gffcl	locus	103150428	103169996	.	+	.	ID=RLOC_00020086;geneIDs=FBgn0053207.1.path1;transcripts=FBgn0053207.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103150428	103169996	.	+	.	ID=FBgn0053207.1.mrna1;geneID=FBgn0053207.1.path1;Name=FBgn0053207.1;Dir=sensecoverage=100.0;identity=100.0;matches=1242;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020086
Chr2	stalkie_big_nohaplotig	exon	103150428	103150655	100	+	.	Parent=FBgn0053207.1.mrna1;Target=FBgn0053207.1 1 228 +
Chr2	stalkie_big_nohaplotig	exon	103159610	103159722	100	+	.	Parent=FBgn0053207.1.mrna1;Target=FBgn0053207.1 229 341 +
Chr2	stalkie_big_nohaplotig	exon	103165714	103165882	100	+	.	Parent=FBgn0053207.1.mrna1;Target=FBgn0053207.1 342 510 +
Chr2	stalkie_big_nohaplotig	exon	103169265	103169996	100	+	.	Parent=FBgn0053207.1.mrna1;Target=FBgn0053207.1 511 1242 +
Chr2	stalkie_big_nohaplotig	CDS	103150428	103150655	.	+	0	Parent=FBgn0053207.1.mrna1;Target=FBgn0053207.1 1 228 +
Chr2	stalkie_big_nohaplotig	CDS	103159610	103159722	.	+	0	Parent=FBgn0053207.1.mrna1;Target=FBgn0053207.1 229 341 +
Chr2	stalkie_big_nohaplotig	CDS	103165714	103165882	.	+	1	Parent=FBgn0053207.1.mrna1;Target=FBgn0053207.1 342 510 +
Chr2	stalkie_big_nohaplotig	CDS	103169265	103169996	.	+	0	Parent=FBgn0053207.1.mrna1;Target=FBgn0053207.1 511 1242 +
Chr2	gffcl	locus	103175280	103175758	.	+	.	ID=RLOC_00020087;geneIDs=comp143803_c0_seq1.path1;transcripts=comp143803_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103175280	103175758	.	+	.	ID=comp143803_c0_seq1.mrna1;geneID=comp143803_c0_seq1.path1;Name=comp143803_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=479;mismatches=0;indels=2;unknowns=0;Target=comp143803_c0_seq1 481 1 .;CDS_Target=comp143803_c0_seq1 480 355 .;locus=RLOC_00020087
Chr2	stalkie_big_nohaplotig	exon	103175280	103175758	99	+	.	Parent=comp143803_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103175632	103175757	.	+	0	Parent=comp143803_c0_seq1.mrna1
Chr2	gffcl	locus	103182317	103183232	.	-	.	ID=RLOC_00020088;geneIDs=Dv_FBgn0198133.1.path1;transcripts=Dv_FBgn0198133.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103182317	103183232	.	-	.	ID=Dv_FBgn0198133.1.mrna1;geneID=Dv_FBgn0198133.1.path1;Name=Dv_FBgn0198133.1;Dir=sensecoverage=100.0;identity=100.0;matches=675;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020088
Chr2	stalkie_big_nohaplotig	exon	103182317	103182401	100	-	.	Parent=Dv_FBgn0198133.1.mrna1;Target=Dv_FBgn0198133.1 591 675 +
Chr2	stalkie_big_nohaplotig	exon	103182477	103182913	100	-	.	Parent=Dv_FBgn0198133.1.mrna1;Target=Dv_FBgn0198133.1 154 590 +
Chr2	stalkie_big_nohaplotig	exon	103183080	103183232	100	-	.	Parent=Dv_FBgn0198133.1.mrna1;Target=Dv_FBgn0198133.1 1 153 +
Chr2	stalkie_big_nohaplotig	CDS	103182317	103182401	.	-	1	Parent=Dv_FBgn0198133.1.mrna1;Target=Dv_FBgn0198133.1 591 675 +
Chr2	stalkie_big_nohaplotig	CDS	103182477	103182913	.	-	0	Parent=Dv_FBgn0198133.1.mrna1;Target=Dv_FBgn0198133.1 154 590 +
Chr2	stalkie_big_nohaplotig	CDS	103183080	103183232	.	-	0	Parent=Dv_FBgn0198133.1.mrna1;Target=Dv_FBgn0198133.1 1 153 +
Chr2	gffcl	locus	103188607	103189674	.	-	.	ID=RLOC_00020089;geneIDs=comp150721_c0_seq1.path1;transcripts=comp150721_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103188607	103189674	.	-	.	ID=comp150721_c0_seq1.mrna1;geneID=comp150721_c0_seq1.path1;Name=comp150721_c0_seq1;Dir=sensecoverage=99.9;identity=99.1;matches=947;mismatches=5;indels=4;unknowns=0;locus=RLOC_00020089
Chr2	stalkie_big_nohaplotig	exon	103188607	103188694	97	-	.	Parent=comp150721_c0_seq1.mrna1;Target=comp150721_c0_seq1 869 956 +
Chr2	stalkie_big_nohaplotig	exon	103188811	103189674	99	-	.	Parent=comp150721_c0_seq1.mrna1;Target=comp150721_c0_seq1 1 868 +
Chr2	stalkie_big_nohaplotig	CDS	103188613	103188694	.	-	1	Parent=comp150721_c0_seq1.mrna1;Target=comp150721_c0_seq1 869 950 +
Chr2	stalkie_big_nohaplotig	CDS	103188811	103189166	.	-	0	Parent=comp150721_c0_seq1.mrna1;Target=comp150721_c0_seq1 513 868 +
Chr2	gffcl	locus	103191733	103196277	.	-	.	ID=RLOC_00020090;geneIDs=comp156902_c0_seq1.path1;transcripts=comp156902_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103191733	103196277	.	-	.	ID=comp156902_c0_seq1.mrna1;geneID=comp156902_c0_seq1.path1;Name=comp156902_c0_seq1;Dir=sensecoverage=99.9;identity=99.5;matches=1679;mismatches=7;indels=1;unknowns=0;locus=RLOC_00020090
Chr2	stalkie_big_nohaplotig	exon	103191733	103192259	100	-	.	Parent=comp156902_c0_seq1.mrna1;Target=comp156902_c0_seq1 1160 1686 +
Chr2	stalkie_big_nohaplotig	exon	103192359	103192804	100	-	.	Parent=comp156902_c0_seq1.mrna1;Target=comp156902_c0_seq1 714 1159 +
Chr2	stalkie_big_nohaplotig	exon	103192890	103193022	100	-	.	Parent=comp156902_c0_seq1.mrna1;Target=comp156902_c0_seq1 581 713 +
Chr2	stalkie_big_nohaplotig	exon	103195607	103195906	97	-	.	Parent=comp156902_c0_seq1.mrna1;Target=comp156902_c0_seq1 282 580 +
Chr2	stalkie_big_nohaplotig	exon	103195997	103196277	100	-	.	Parent=comp156902_c0_seq1.mrna1;Target=comp156902_c0_seq1 1 281 +
Chr2	stalkie_big_nohaplotig	CDS	103192178	103192259	.	-	1	Parent=comp156902_c0_seq1.mrna1;Target=comp156902_c0_seq1 1160 1241 +
Chr2	stalkie_big_nohaplotig	CDS	103192359	103192804	.	-	0	Parent=comp156902_c0_seq1.mrna1;Target=comp156902_c0_seq1 714 1159 +
Chr2	stalkie_big_nohaplotig	CDS	103192890	103193006	.	-	0	Parent=comp156902_c0_seq1.mrna1;Target=comp156902_c0_seq1 597 713 +
Chr2	gffcl	locus	103198846	103200026	.	-	.	ID=RLOC_00020091;geneIDs=comp149064_c0_seq1.path1;transcripts=comp149064_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103198846	103200026	.	-	.	ID=comp149064_c0_seq1.mrna1;geneID=comp149064_c0_seq1.path1;Name=comp149064_c0_seq1;Dir=sensecoverage=99.4;identity=99.9;matches=1001;mismatches=0;indels=1;unknowns=0;locus=RLOC_00020091
Chr2	stalkie_big_nohaplotig	exon	103198846	103199056	100	-	.	Parent=comp149064_c0_seq1.mrna1;Target=comp149064_c0_seq1 792 1002 +
Chr2	stalkie_big_nohaplotig	exon	103199166	103199614	99	-	.	Parent=comp149064_c0_seq1.mrna1;Target=comp149064_c0_seq1 342 791 +
Chr2	stalkie_big_nohaplotig	exon	103199686	103200026	100	-	.	Parent=comp149064_c0_seq1.mrna1;Target=comp149064_c0_seq1 1 341 +
Chr2	stalkie_big_nohaplotig	CDS	103199289	103199614	.	-	0	Parent=comp149064_c0_seq1.mrna1;Target=comp149064_c0_seq1 342 668 +
Chr2	stalkie_big_nohaplotig	CDS	103199686	103199814	.	-	0	Parent=comp149064_c0_seq1.mrna1;Target=comp149064_c0_seq1 213 341 +
Chr2	gffcl	locus	103208693	103215833	.	+	.	ID=RLOC_00020092;geneIDs=FBgn0038354.1.path1;transcripts=FBgn0038354.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103208693	103215833	.	+	.	ID=FBgn0038354.1.mrna1;geneID=FBgn0038354.1.path1;Name=FBgn0038354.1;Dir=sensecoverage=100.0;identity=100.0;matches=1896;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020092
Chr2	stalkie_big_nohaplotig	exon	103208693	103209185	100	+	.	Parent=FBgn0038354.1.mrna1;Target=FBgn0038354.1 1 493 +
Chr2	stalkie_big_nohaplotig	exon	103213500	103213720	100	+	.	Parent=FBgn0038354.1.mrna1;Target=FBgn0038354.1 494 714 +
Chr2	stalkie_big_nohaplotig	exon	103213793	103214114	100	+	.	Parent=FBgn0038354.1.mrna1;Target=FBgn0038354.1 715 1036 +
Chr2	stalkie_big_nohaplotig	exon	103214200	103214361	100	+	.	Parent=FBgn0038354.1.mrna1;Target=FBgn0038354.1 1037 1198 +
Chr2	stalkie_big_nohaplotig	exon	103215065	103215351	100	+	.	Parent=FBgn0038354.1.mrna1;Target=FBgn0038354.1 1199 1485 +
Chr2	stalkie_big_nohaplotig	exon	103215423	103215833	100	+	.	Parent=FBgn0038354.1.mrna1;Target=FBgn0038354.1 1486 1896 +
Chr2	stalkie_big_nohaplotig	CDS	103208693	103209185	.	+	0	Parent=FBgn0038354.1.mrna1;Target=FBgn0038354.1 1 493 +
Chr2	stalkie_big_nohaplotig	CDS	103213500	103213720	.	+	2	Parent=FBgn0038354.1.mrna1;Target=FBgn0038354.1 494 714 +
Chr2	stalkie_big_nohaplotig	CDS	103213793	103214114	.	+	0	Parent=FBgn0038354.1.mrna1;Target=FBgn0038354.1 715 1036 +
Chr2	stalkie_big_nohaplotig	CDS	103214200	103214361	.	+	2	Parent=FBgn0038354.1.mrna1;Target=FBgn0038354.1 1037 1198 +
Chr2	stalkie_big_nohaplotig	CDS	103215065	103215351	.	+	2	Parent=FBgn0038354.1.mrna1;Target=FBgn0038354.1 1199 1485 +
Chr2	stalkie_big_nohaplotig	CDS	103215423	103215833	.	+	0	Parent=FBgn0038354.1.mrna1;Target=FBgn0038354.1 1486 1896 +
Chr2	gffcl	locus	103222759	103224502	.	+	.	ID=RLOC_00020093;geneIDs=FBgn0038355.1.path1;transcripts=FBgn0038355.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103222759	103224502	.	+	.	ID=FBgn0038355.1.mrna1;geneID=FBgn0038355.1.path1;Name=FBgn0038355.1;Dir=sensecoverage=100.0;identity=100.0;matches=966;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020093
Chr2	stalkie_big_nohaplotig	exon	103222759	103223055	100	+	.	Parent=FBgn0038355.1.mrna1;Target=FBgn0038355.1 1 297 +
Chr2	stalkie_big_nohaplotig	exon	103223289	103223614	100	+	.	Parent=FBgn0038355.1.mrna1;Target=FBgn0038355.1 298 623 +
Chr2	stalkie_big_nohaplotig	exon	103224049	103224273	100	+	.	Parent=FBgn0038355.1.mrna1;Target=FBgn0038355.1 624 848 +
Chr2	stalkie_big_nohaplotig	exon	103224385	103224502	100	+	.	Parent=FBgn0038355.1.mrna1;Target=FBgn0038355.1 849 966 +
Chr2	stalkie_big_nohaplotig	CDS	103222759	103223055	.	+	0	Parent=FBgn0038355.1.mrna1;Target=FBgn0038355.1 1 297 +
Chr2	stalkie_big_nohaplotig	CDS	103223289	103223614	.	+	0	Parent=FBgn0038355.1.mrna1;Target=FBgn0038355.1 298 623 +
Chr2	stalkie_big_nohaplotig	CDS	103224049	103224273	.	+	1	Parent=FBgn0038355.1.mrna1;Target=FBgn0038355.1 624 848 +
Chr2	stalkie_big_nohaplotig	CDS	103224385	103224502	.	+	1	Parent=FBgn0038355.1.mrna1;Target=FBgn0038355.1 849 966 +
Chr2	gffcl	locus	103232115	103238154	.	-	.	ID=RLOC_00020094;geneIDs=FBgn0086679.1.path1;transcripts=FBgn0086679.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103232115	103238154	.	-	.	ID=FBgn0086679.1.mrna1;geneID=FBgn0086679.1.path1;Name=FBgn0086679.1;Dir=sensecoverage=100.0;identity=100.0;matches=2541;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020094
Chr2	stalkie_big_nohaplotig	exon	103232115	103233349	100	-	.	Parent=FBgn0086679.1.mrna1;Target=FBgn0086679.1 1307 2541 +
Chr2	stalkie_big_nohaplotig	exon	103233411	103234095	100	-	.	Parent=FBgn0086679.1.mrna1;Target=FBgn0086679.1 622 1306 +
Chr2	stalkie_big_nohaplotig	exon	103234159	103234305	100	-	.	Parent=FBgn0086679.1.mrna1;Target=FBgn0086679.1 475 621 +
Chr2	stalkie_big_nohaplotig	exon	103237616	103237972	100	-	.	Parent=FBgn0086679.1.mrna1;Target=FBgn0086679.1 118 474 +
Chr2	stalkie_big_nohaplotig	exon	103238038	103238154	100	-	.	Parent=FBgn0086679.1.mrna1;Target=FBgn0086679.1 1 117 +
Chr2	stalkie_big_nohaplotig	CDS	103232115	103233349	.	-	2	Parent=FBgn0086679.1.mrna1;Target=FBgn0086679.1 1307 2541 +
Chr2	stalkie_big_nohaplotig	CDS	103233411	103234095	.	-	0	Parent=FBgn0086679.1.mrna1;Target=FBgn0086679.1 622 1306 +
Chr2	stalkie_big_nohaplotig	CDS	103234159	103234305	.	-	0	Parent=FBgn0086679.1.mrna1;Target=FBgn0086679.1 475 621 +
Chr2	stalkie_big_nohaplotig	CDS	103237616	103237972	.	-	0	Parent=FBgn0086679.1.mrna1;Target=FBgn0086679.1 118 474 +
Chr2	stalkie_big_nohaplotig	CDS	103238038	103238154	.	-	0	Parent=FBgn0086679.1.mrna1;Target=FBgn0086679.1 1 117 +
Chr2	gffcl	locus	103239180	103242699	.	+	.	ID=RLOC_00020095;geneIDs=FBgn0024326.1.path1;transcripts=FBgn0024326.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103239180	103242699	.	+	.	ID=FBgn0024326.1.mrna1;geneID=FBgn0024326.1.path1;Name=FBgn0024326.1;Dir=sensecoverage=100.0;identity=100.0;matches=1242;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020095
Chr2	stalkie_big_nohaplotig	exon	103239180	103239213	100	+	.	Parent=FBgn0024326.1.mrna1;Target=FBgn0024326.1 1 34 +
Chr2	stalkie_big_nohaplotig	exon	103239271	103239477	100	+	.	Parent=FBgn0024326.1.mrna1;Target=FBgn0024326.1 35 241 +
Chr2	stalkie_big_nohaplotig	exon	103239542	103240143	100	+	.	Parent=FBgn0024326.1.mrna1;Target=FBgn0024326.1 242 843 +
Chr2	stalkie_big_nohaplotig	exon	103240939	103241079	100	+	.	Parent=FBgn0024326.1.mrna1;Target=FBgn0024326.1 844 984 +
Chr2	stalkie_big_nohaplotig	exon	103241146	103241231	100	+	.	Parent=FBgn0024326.1.mrna1;Target=FBgn0024326.1 985 1070 +
Chr2	stalkie_big_nohaplotig	exon	103242528	103242699	100	+	.	Parent=FBgn0024326.1.mrna1;Target=FBgn0024326.1 1071 1242 +
Chr2	stalkie_big_nohaplotig	CDS	103239180	103239213	.	+	0	Parent=FBgn0024326.1.mrna1;Target=FBgn0024326.1 1 34 +
Chr2	stalkie_big_nohaplotig	CDS	103239271	103239477	.	+	2	Parent=FBgn0024326.1.mrna1;Target=FBgn0024326.1 35 241 +
Chr2	stalkie_big_nohaplotig	CDS	103239542	103240143	.	+	2	Parent=FBgn0024326.1.mrna1;Target=FBgn0024326.1 242 843 +
Chr2	stalkie_big_nohaplotig	CDS	103240939	103241079	.	+	0	Parent=FBgn0024326.1.mrna1;Target=FBgn0024326.1 844 984 +
Chr2	stalkie_big_nohaplotig	CDS	103241146	103241231	.	+	0	Parent=FBgn0024326.1.mrna1;Target=FBgn0024326.1 985 1070 +
Chr2	stalkie_big_nohaplotig	CDS	103242528	103242699	.	+	1	Parent=FBgn0024326.1.mrna1;Target=FBgn0024326.1 1071 1242 +
Chr2	gffcl	locus	103243315	103244445	.	-	.	ID=RLOC_00020096;geneIDs=comp116678_c0_seq1.path1;transcripts=comp116678_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103243315	103244445	.	-	.	ID=comp116678_c0_seq1.mrna1;geneID=comp116678_c0_seq1.path1;Name=comp116678_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1131;mismatches=0;indels=0;unknowns=0;Target=comp116678_c0_seq1 1131 1 .;CDS_Target=comp116678_c0_seq1 944 885 .;locus=RLOC_00020096
Chr2	stalkie_big_nohaplotig	exon	103243315	103244445	100	-	.	Parent=comp116678_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103243502	103243561	.	-	0	Parent=comp116678_c0_seq1.mrna1
Chr2	gffcl	locus	103248433	103248791	.	+	.	ID=RLOC_00020097;geneIDs=comp149947_c1_seq1.path3;transcripts=comp149947_c1_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	103248433	103248791	.	+	.	ID=comp149947_c1_seq1.mrna3;geneID=comp149947_c1_seq1.path3;Name=comp149947_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=355;mismatches=4;indels=0;unknowns=0;Target=comp149947_c1_seq1 359 1 .;CDS_Target=comp149947_c1_seq1 359 3 .;locus=RLOC_00020097
Chr2	stalkie_big_nohaplotig	exon	103248433	103248791	98	+	.	Parent=comp149947_c1_seq1.mrna3
Chr2	stalkie_big_nohaplotig	CDS	103248435	103248791	.	+	0	Parent=comp149947_c1_seq1.mrna3
Chr2	gffcl	locus	103273315	103280605	.	+	.	ID=RLOC_00020098;geneIDs=FBgn0261929.1.path1;transcripts=FBgn0261929.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103273315	103280605	.	+	.	ID=FBgn0261929.1.mrna1;geneID=FBgn0261929.1.path1;Name=FBgn0261929.1;Dir=sensecoverage=100.0;identity=99.7;matches=2624;mismatches=7;indels=0;unknowns=0;locus=RLOC_00020098
Chr2	stalkie_big_nohaplotig	exon	103273315	103273768	99	+	.	Parent=FBgn0261929.1.mrna1;Target=FBgn0261929.1 1 454 +
Chr2	stalkie_big_nohaplotig	exon	103277241	103277473	99	+	.	Parent=FBgn0261929.1.mrna1;Target=FBgn0261929.1 455 687 +
Chr2	stalkie_big_nohaplotig	exon	103277534	103277756	100	+	.	Parent=FBgn0261929.1.mrna1;Target=FBgn0261929.1 688 910 +
Chr2	stalkie_big_nohaplotig	exon	103277833	103277971	100	+	.	Parent=FBgn0261929.1.mrna1;Target=FBgn0261929.1 911 1049 +
Chr2	stalkie_big_nohaplotig	exon	103278037	103278351	100	+	.	Parent=FBgn0261929.1.mrna1;Target=FBgn0261929.1 1050 1364 +
Chr2	stalkie_big_nohaplotig	exon	103279339	103280605	99	+	.	Parent=FBgn0261929.1.mrna1;Target=FBgn0261929.1 1365 2631 +
Chr2	stalkie_big_nohaplotig	CDS	103273315	103273768	.	+	0	Parent=FBgn0261929.1.mrna1;Target=FBgn0261929.1 1 454 +
Chr2	stalkie_big_nohaplotig	CDS	103277241	103277473	.	+	2	Parent=FBgn0261929.1.mrna1;Target=FBgn0261929.1 455 687 +
Chr2	stalkie_big_nohaplotig	CDS	103277534	103277756	.	+	0	Parent=FBgn0261929.1.mrna1;Target=FBgn0261929.1 688 910 +
Chr2	stalkie_big_nohaplotig	CDS	103277833	103277971	.	+	2	Parent=FBgn0261929.1.mrna1;Target=FBgn0261929.1 911 1049 +
Chr2	stalkie_big_nohaplotig	CDS	103278037	103278351	.	+	1	Parent=FBgn0261929.1.mrna1;Target=FBgn0261929.1 1050 1364 +
Chr2	stalkie_big_nohaplotig	CDS	103279339	103280605	.	+	1	Parent=FBgn0261929.1.mrna1;Target=FBgn0261929.1 1365 2631 +
Chr2	gffcl	locus	103282288	103284127	.	+	.	ID=RLOC_00020099;geneIDs=comp150996_c0_seq1.path1,comp151802_c0_seq1.path1;transcripts=comp151802_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103282288	103283299	.	+	.	ID=comp151802_c0_seq1.mrna1;geneID=comp151802_c0_seq1.path1;Name=comp151802_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.8;matches=1009;mismatches=3;indels=9;unknowns=0;Target=comp151802_c0_seq1 1021 1 .;CDS_Target=comp151802_c0_seq1 176 3 .;locus=RLOC_00020099
Chr2	stalkie_big_nohaplotig	exon	103282288	103283299	98	+	.	Parent=comp151802_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103282290	103282463	.	+	0	Parent=comp151802_c0_seq1.mrna1
Chr2	gffcl	locus	103293728	103298490	.	+	.	ID=RLOC_00020100;geneIDs=FBgn0032217.1.path1,comp148734_c1_seq1.path1;transcripts=comp148734_c1_seq1.mrna1,FBgn0032217.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103293728	103298490	.	+	.	ID=comp148734_c1_seq1.mrna1;geneID=comp148734_c1_seq1.path1;Name=comp148734_c1_seq1;Dir=antisensecoverage=99.1;identity=99.4;matches=2077;mismatches=9;indels=3;unknowns=0;locus=RLOC_00020100
Chr2	stalkie_big_nohaplotig	exon	103293728	103294119	100	+	.	Parent=comp148734_c1_seq1.mrna1;Target=comp148734_c1_seq1 1699 2090 -
Chr2	stalkie_big_nohaplotig	exon	103294452	103294530	100	+	.	Parent=comp148734_c1_seq1.mrna1;Target=comp148734_c1_seq1 1620 1698 -
Chr2	stalkie_big_nohaplotig	exon	103294603	103294711	100	+	.	Parent=comp148734_c1_seq1.mrna1;Target=comp148734_c1_seq1 1511 1619 -
Chr2	stalkie_big_nohaplotig	exon	103294772	103295155	100	+	.	Parent=comp148734_c1_seq1.mrna1;Target=comp148734_c1_seq1 1127 1510 -
Chr2	stalkie_big_nohaplotig	exon	103295214	103295393	100	+	.	Parent=comp148734_c1_seq1.mrna1;Target=comp148734_c1_seq1 947 1126 -
Chr2	stalkie_big_nohaplotig	exon	103295626	103295715	100	+	.	Parent=comp148734_c1_seq1.mrna1;Target=comp148734_c1_seq1 857 946 -
Chr2	stalkie_big_nohaplotig	exon	103297573	103298001	100	+	.	Parent=comp148734_c1_seq1.mrna1;Target=comp148734_c1_seq1 428 856 -
Chr2	stalkie_big_nohaplotig	exon	103298068	103298490	97	+	.	Parent=comp148734_c1_seq1.mrna1;Target=comp148734_c1_seq1 2 427 -
Chr2	stalkie_big_nohaplotig	CDS	103293951	103294119	.	+	0	Parent=comp148734_c1_seq1.mrna1;Target=comp148734_c1_seq1 1699 1867 .
Chr2	stalkie_big_nohaplotig	CDS	103294452	103294530	.	+	2	Parent=comp148734_c1_seq1.mrna1;Target=comp148734_c1_seq1 1620 1698 .
Chr2	stalkie_big_nohaplotig	CDS	103294603	103294711	.	+	1	Parent=comp148734_c1_seq1.mrna1;Target=comp148734_c1_seq1 1511 1619 .
Chr2	stalkie_big_nohaplotig	CDS	103294772	103295155	.	+	0	Parent=comp148734_c1_seq1.mrna1;Target=comp148734_c1_seq1 1127 1510 .
Chr2	stalkie_big_nohaplotig	CDS	103295214	103295393	.	+	0	Parent=comp148734_c1_seq1.mrna1;Target=comp148734_c1_seq1 947 1126 .
Chr2	stalkie_big_nohaplotig	CDS	103295626	103295664	.	+	0	Parent=comp148734_c1_seq1.mrna1;Target=comp148734_c1_seq1 908 946 .
Chr2	stalkie_big_nohaplotig	mRNA	103293918	103298430	.	+	.	ID=FBgn0032217.1.mrna1;geneID=FBgn0032217.1.path1;Name=FBgn0032217.1;Dir=sensecoverage=100.0;identity=100.0;matches=1746;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020100
Chr2	stalkie_big_nohaplotig	exon	103293918	103294119	100	+	.	Parent=FBgn0032217.1.mrna1;Target=FBgn0032217.1 1 202 +
Chr2	stalkie_big_nohaplotig	exon	103294452	103294530	100	+	.	Parent=FBgn0032217.1.mrna1;Target=FBgn0032217.1 203 281 +
Chr2	stalkie_big_nohaplotig	exon	103294603	103294711	100	+	.	Parent=FBgn0032217.1.mrna1;Target=FBgn0032217.1 282 390 +
Chr2	stalkie_big_nohaplotig	exon	103294772	103295155	100	+	.	Parent=FBgn0032217.1.mrna1;Target=FBgn0032217.1 391 774 +
Chr2	stalkie_big_nohaplotig	exon	103295214	103295393	100	+	.	Parent=FBgn0032217.1.mrna1;Target=FBgn0032217.1 775 954 +
Chr2	stalkie_big_nohaplotig	exon	103297573	103298001	100	+	.	Parent=FBgn0032217.1.mrna1;Target=FBgn0032217.1 955 1383 +
Chr2	stalkie_big_nohaplotig	exon	103298068	103298430	100	+	.	Parent=FBgn0032217.1.mrna1;Target=FBgn0032217.1 1384 1746 +
Chr2	stalkie_big_nohaplotig	CDS	103293918	103294119	.	+	0	Parent=FBgn0032217.1.mrna1;Target=FBgn0032217.1 1 202 +
Chr2	stalkie_big_nohaplotig	CDS	103294452	103294530	.	+	2	Parent=FBgn0032217.1.mrna1;Target=FBgn0032217.1 203 281 +
Chr2	stalkie_big_nohaplotig	CDS	103294603	103294711	.	+	1	Parent=FBgn0032217.1.mrna1;Target=FBgn0032217.1 282 390 +
Chr2	stalkie_big_nohaplotig	CDS	103294772	103295155	.	+	0	Parent=FBgn0032217.1.mrna1;Target=FBgn0032217.1 391 774 +
Chr2	stalkie_big_nohaplotig	CDS	103295214	103295393	.	+	0	Parent=FBgn0032217.1.mrna1;Target=FBgn0032217.1 775 954 +
Chr2	stalkie_big_nohaplotig	CDS	103297573	103298001	.	+	0	Parent=FBgn0032217.1.mrna1;Target=FBgn0032217.1 955 1383 +
Chr2	stalkie_big_nohaplotig	CDS	103298068	103298430	.	+	0	Parent=FBgn0032217.1.mrna1;Target=FBgn0032217.1 1384 1746 +
Chr2	gffcl	locus	103298427	103307124	.	-	.	ID=RLOC_00020101;geneIDs=Dp_FBgn0076145.1.path1,comp160717_c0_seq1.path1;transcripts=comp160717_c0_seq1.mrna1,Dp_FBgn0076145.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103298427	103307124	.	-	.	ID=comp160717_c0_seq1.mrna1;geneID=comp160717_c0_seq1.path1;Name=comp160717_c0_seq1;Dir=antisensecoverage=97.3;identity=99.9;matches=5070;mismatches=4;indels=0;unknowns=0;locus=RLOC_00020101
Chr2	stalkie_big_nohaplotig	exon	103298427	103299024	99	-	.	Parent=comp160717_c0_seq1.mrna1;Target=comp160717_c0_seq1 140 737 -
Chr2	stalkie_big_nohaplotig	exon	103299085	103299227	100	-	.	Parent=comp160717_c0_seq1.mrna1;Target=comp160717_c0_seq1 738 880 -
Chr2	stalkie_big_nohaplotig	exon	103301178	103301289	100	-	.	Parent=comp160717_c0_seq1.mrna1;Target=comp160717_c0_seq1 881 992 -
Chr2	stalkie_big_nohaplotig	exon	103301356	103302248	100	-	.	Parent=comp160717_c0_seq1.mrna1;Target=comp160717_c0_seq1 993 1885 -
Chr2	stalkie_big_nohaplotig	exon	103302303	103302735	100	-	.	Parent=comp160717_c0_seq1.mrna1;Target=comp160717_c0_seq1 1886 2318 -
Chr2	stalkie_big_nohaplotig	exon	103303873	103303944	100	-	.	Parent=comp160717_c0_seq1.mrna1;Target=comp160717_c0_seq1 2319 2390 -
Chr2	stalkie_big_nohaplotig	exon	103304005	103304259	99	-	.	Parent=comp160717_c0_seq1.mrna1;Target=comp160717_c0_seq1 2391 2645 -
Chr2	stalkie_big_nohaplotig	exon	103304440	103306353	99	-	.	Parent=comp160717_c0_seq1.mrna1;Target=comp160717_c0_seq1 2646 4559 -
Chr2	stalkie_big_nohaplotig	exon	103306408	103306846	100	-	.	Parent=comp160717_c0_seq1.mrna1;Target=comp160717_c0_seq1 4560 4998 -
Chr2	stalkie_big_nohaplotig	exon	103306910	103307124	99	-	.	Parent=comp160717_c0_seq1.mrna1;Target=comp160717_c0_seq1 4999 5213 -
Chr2	stalkie_big_nohaplotig	CDS	103298857	103299024	.	-	0	Parent=comp160717_c0_seq1.mrna1;Target=comp160717_c0_seq1 570 737 .
Chr2	stalkie_big_nohaplotig	CDS	103299085	103299227	.	-	2	Parent=comp160717_c0_seq1.mrna1;Target=comp160717_c0_seq1 738 880 .
Chr2	stalkie_big_nohaplotig	CDS	103301178	103301289	.	-	0	Parent=comp160717_c0_seq1.mrna1;Target=comp160717_c0_seq1 881 992 .
Chr2	stalkie_big_nohaplotig	CDS	103301356	103302248	.	-	2	Parent=comp160717_c0_seq1.mrna1;Target=comp160717_c0_seq1 993 1885 .
Chr2	stalkie_big_nohaplotig	CDS	103302303	103302735	.	-	0	Parent=comp160717_c0_seq1.mrna1;Target=comp160717_c0_seq1 1886 2318 .
Chr2	stalkie_big_nohaplotig	CDS	103303873	103303944	.	-	0	Parent=comp160717_c0_seq1.mrna1;Target=comp160717_c0_seq1 2319 2390 .
Chr2	stalkie_big_nohaplotig	CDS	103304005	103304259	.	-	0	Parent=comp160717_c0_seq1.mrna1;Target=comp160717_c0_seq1 2391 2645 .
Chr2	stalkie_big_nohaplotig	CDS	103304440	103306353	.	-	0	Parent=comp160717_c0_seq1.mrna1;Target=comp160717_c0_seq1 2646 4559 .
Chr2	stalkie_big_nohaplotig	CDS	103306408	103306846	.	-	1	Parent=comp160717_c0_seq1.mrna1;Target=comp160717_c0_seq1 4560 4998 .
Chr2	stalkie_big_nohaplotig	CDS	103306910	103306911	.	-	0	Parent=comp160717_c0_seq1.mrna1;Target=comp160717_c0_seq1 4999 5000 .
Chr2	stalkie_big_nohaplotig	mRNA	103298808	103306846	.	-	.	ID=Dp_FBgn0076145.1.mrna1;geneID=Dp_FBgn0076145.1.path1;Name=Dp_FBgn0076145.1;Dir=sensecoverage=99.9;identity=100.0;matches=4412;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020101
Chr2	stalkie_big_nohaplotig	exon	103298808	103298869	100	-	.	Parent=Dp_FBgn0076145.1.mrna1;Target=Dp_FBgn0076145.1 4358 4419 +
Chr2	stalkie_big_nohaplotig	exon	103298934	103299024	100	-	.	Parent=Dp_FBgn0076145.1.mrna1;Target=Dp_FBgn0076145.1 4267 4357 +
Chr2	stalkie_big_nohaplotig	exon	103299085	103299227	100	-	.	Parent=Dp_FBgn0076145.1.mrna1;Target=Dp_FBgn0076145.1 4124 4266 +
Chr2	stalkie_big_nohaplotig	exon	103301178	103301289	100	-	.	Parent=Dp_FBgn0076145.1.mrna1;Target=Dp_FBgn0076145.1 4012 4123 +
Chr2	stalkie_big_nohaplotig	exon	103301356	103302248	100	-	.	Parent=Dp_FBgn0076145.1.mrna1;Target=Dp_FBgn0076145.1 3119 4011 +
Chr2	stalkie_big_nohaplotig	exon	103302303	103302735	100	-	.	Parent=Dp_FBgn0076145.1.mrna1;Target=Dp_FBgn0076145.1 2686 3118 +
Chr2	stalkie_big_nohaplotig	exon	103303873	103303944	100	-	.	Parent=Dp_FBgn0076145.1.mrna1;Target=Dp_FBgn0076145.1 2614 2685 +
Chr2	stalkie_big_nohaplotig	exon	103304005	103304259	99	-	.	Parent=Dp_FBgn0076145.1.mrna1;Target=Dp_FBgn0076145.1 2359 2613 +
Chr2	stalkie_big_nohaplotig	exon	103304440	103306353	99	-	.	Parent=Dp_FBgn0076145.1.mrna1;Target=Dp_FBgn0076145.1 445 2358 +
Chr2	stalkie_big_nohaplotig	exon	103306408	103306846	100	-	.	Parent=Dp_FBgn0076145.1.mrna1;Target=Dp_FBgn0076145.1 6 444 +
Chr2	stalkie_big_nohaplotig	CDS	103298808	103298869	.	-	2	Parent=Dp_FBgn0076145.1.mrna1;Target=Dp_FBgn0076145.1 4358 4419 +
Chr2	stalkie_big_nohaplotig	CDS	103298934	103299024	.	-	0	Parent=Dp_FBgn0076145.1.mrna1;Target=Dp_FBgn0076145.1 4267 4357 +
Chr2	stalkie_big_nohaplotig	CDS	103299085	103299227	.	-	2	Parent=Dp_FBgn0076145.1.mrna1;Target=Dp_FBgn0076145.1 4124 4266 +
Chr2	stalkie_big_nohaplotig	CDS	103301178	103301289	.	-	0	Parent=Dp_FBgn0076145.1.mrna1;Target=Dp_FBgn0076145.1 4012 4123 +
Chr2	stalkie_big_nohaplotig	CDS	103301356	103302248	.	-	2	Parent=Dp_FBgn0076145.1.mrna1;Target=Dp_FBgn0076145.1 3119 4011 +
Chr2	stalkie_big_nohaplotig	CDS	103302303	103302735	.	-	0	Parent=Dp_FBgn0076145.1.mrna1;Target=Dp_FBgn0076145.1 2686 3118 +
Chr2	stalkie_big_nohaplotig	CDS	103303873	103303944	.	-	0	Parent=Dp_FBgn0076145.1.mrna1;Target=Dp_FBgn0076145.1 2614 2685 +
Chr2	stalkie_big_nohaplotig	CDS	103304005	103304259	.	-	0	Parent=Dp_FBgn0076145.1.mrna1;Target=Dp_FBgn0076145.1 2359 2613 +
Chr2	stalkie_big_nohaplotig	CDS	103304440	103306353	.	-	0	Parent=Dp_FBgn0076145.1.mrna1;Target=Dp_FBgn0076145.1 445 2358 +
Chr2	stalkie_big_nohaplotig	CDS	103306408	103306845	.	-	0	Parent=Dp_FBgn0076145.1.mrna1;Target=Dp_FBgn0076145.1 7 444 +
Chr2	gffcl	locus	103308936	103315680	.	+	.	ID=RLOC_00020102;geneIDs=FBgn0263398.1.path1,comp147311_c0_seq1.path1;transcripts=comp147311_c0_seq1.mrna1,FBgn0263398.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103308936	103314495	.	+	.	ID=comp147311_c0_seq1.mrna1;geneID=comp147311_c0_seq1.path1;Name=comp147311_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=2233;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020102
Chr2	stalkie_big_nohaplotig	exon	103308936	103309045	100	+	.	Parent=comp147311_c0_seq1.mrna1;Target=comp147311_c0_seq1 2126 2235 -
Chr2	stalkie_big_nohaplotig	exon	103309598	103309992	99	+	.	Parent=comp147311_c0_seq1.mrna1;Target=comp147311_c0_seq1 1731 2125 -
Chr2	stalkie_big_nohaplotig	exon	103312508	103312573	100	+	.	Parent=comp147311_c0_seq1.mrna1;Target=comp147311_c0_seq1 1665 1730 -
Chr2	stalkie_big_nohaplotig	exon	103312643	103312833	100	+	.	Parent=comp147311_c0_seq1.mrna1;Target=comp147311_c0_seq1 1474 1664 -
Chr2	stalkie_big_nohaplotig	exon	103312892	103313037	100	+	.	Parent=comp147311_c0_seq1.mrna1;Target=comp147311_c0_seq1 1328 1473 -
Chr2	stalkie_big_nohaplotig	exon	103313097	103313194	100	+	.	Parent=comp147311_c0_seq1.mrna1;Target=comp147311_c0_seq1 1230 1327 -
Chr2	stalkie_big_nohaplotig	exon	103313267	103314495	99	+	.	Parent=comp147311_c0_seq1.mrna1;Target=comp147311_c0_seq1 1 1229 -
Chr2	stalkie_big_nohaplotig	CDS	103309876	103309992	.	+	0	Parent=comp147311_c0_seq1.mrna1;Target=comp147311_c0_seq1 1731 1847 .
Chr2	stalkie_big_nohaplotig	CDS	103312508	103312573	.	+	0	Parent=comp147311_c0_seq1.mrna1;Target=comp147311_c0_seq1 1665 1730 .
Chr2	stalkie_big_nohaplotig	CDS	103312643	103312833	.	+	0	Parent=comp147311_c0_seq1.mrna1;Target=comp147311_c0_seq1 1474 1664 .
Chr2	stalkie_big_nohaplotig	CDS	103312892	103313037	.	+	1	Parent=comp147311_c0_seq1.mrna1;Target=comp147311_c0_seq1 1328 1473 .
Chr2	stalkie_big_nohaplotig	CDS	103313097	103313194	.	+	2	Parent=comp147311_c0_seq1.mrna1;Target=comp147311_c0_seq1 1230 1327 .
Chr2	stalkie_big_nohaplotig	CDS	103313267	103313323	.	+	0	Parent=comp147311_c0_seq1.mrna1;Target=comp147311_c0_seq1 1173 1229 .
Chr2	stalkie_big_nohaplotig	mRNA	103309855	103315680	.	+	.	ID=FBgn0263398.1.mrna1;geneID=FBgn0263398.1.path1;Name=FBgn0263398.1;Dir=sensecoverage=100.0;identity=100.0;matches=903;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020102
Chr2	stalkie_big_nohaplotig	exon	103309855	103309992	100	+	.	Parent=FBgn0263398.1.mrna1;Target=FBgn0263398.1 1 138 +
Chr2	stalkie_big_nohaplotig	exon	103312508	103312573	100	+	.	Parent=FBgn0263398.1.mrna1;Target=FBgn0263398.1 139 204 +
Chr2	stalkie_big_nohaplotig	exon	103312643	103312833	100	+	.	Parent=FBgn0263398.1.mrna1;Target=FBgn0263398.1 205 395 +
Chr2	stalkie_big_nohaplotig	exon	103312892	103313037	100	+	.	Parent=FBgn0263398.1.mrna1;Target=FBgn0263398.1 396 541 +
Chr2	stalkie_big_nohaplotig	exon	103313097	103313194	100	+	.	Parent=FBgn0263398.1.mrna1;Target=FBgn0263398.1 542 639 +
Chr2	stalkie_big_nohaplotig	exon	103313267	103313315	100	+	.	Parent=FBgn0263398.1.mrna1;Target=FBgn0263398.1 640 688 +
Chr2	stalkie_big_nohaplotig	exon	103314900	103315028	100	+	.	Parent=FBgn0263398.1.mrna1;Target=FBgn0263398.1 689 817 +
Chr2	stalkie_big_nohaplotig	exon	103315595	103315680	100	+	.	Parent=FBgn0263398.1.mrna1;Target=FBgn0263398.1 818 903 +
Chr2	stalkie_big_nohaplotig	CDS	103309855	103309992	.	+	0	Parent=FBgn0263398.1.mrna1;Target=FBgn0263398.1 1 138 +
Chr2	stalkie_big_nohaplotig	CDS	103312508	103312573	.	+	0	Parent=FBgn0263398.1.mrna1;Target=FBgn0263398.1 139 204 +
Chr2	stalkie_big_nohaplotig	CDS	103312643	103312833	.	+	0	Parent=FBgn0263398.1.mrna1;Target=FBgn0263398.1 205 395 +
Chr2	stalkie_big_nohaplotig	CDS	103312892	103313037	.	+	1	Parent=FBgn0263398.1.mrna1;Target=FBgn0263398.1 396 541 +
Chr2	stalkie_big_nohaplotig	CDS	103313097	103313194	.	+	2	Parent=FBgn0263398.1.mrna1;Target=FBgn0263398.1 542 639 +
Chr2	stalkie_big_nohaplotig	CDS	103313267	103313315	.	+	0	Parent=FBgn0263398.1.mrna1;Target=FBgn0263398.1 640 688 +
Chr2	stalkie_big_nohaplotig	CDS	103314900	103315028	.	+	2	Parent=FBgn0263398.1.mrna1;Target=FBgn0263398.1 689 817 +
Chr2	stalkie_big_nohaplotig	CDS	103315595	103315680	.	+	2	Parent=FBgn0263398.1.mrna1;Target=FBgn0263398.1 818 903 +
Chr2	gffcl	locus	103331941	103343263	.	+	.	ID=RLOC_00020103;geneIDs=FBgn0259685.1.path1;transcripts=FBgn0259685.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103331941	103343263	.	+	.	ID=FBgn0259685.1.mrna1;geneID=FBgn0259685.1.path1;Name=FBgn0259685.1;Dir=sensecoverage=97.5;identity=100.0;matches=6347;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020103
Chr2	stalkie_big_nohaplotig	exon	103331941	103332060	100	+	.	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 164 283 +
Chr2	stalkie_big_nohaplotig	exon	103332129	103332353	100	+	.	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 284 508 +
Chr2	stalkie_big_nohaplotig	exon	103332418	103333407	100	+	.	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 509 1498 +
Chr2	stalkie_big_nohaplotig	exon	103335242	103335427	100	+	.	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 1499 1684 +
Chr2	stalkie_big_nohaplotig	exon	103335649	103336172	100	+	.	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 1685 2208 +
Chr2	stalkie_big_nohaplotig	exon	103337543	103337752	100	+	.	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 2209 2418 +
Chr2	stalkie_big_nohaplotig	exon	103337819	103338174	100	+	.	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 2419 2774 +
Chr2	stalkie_big_nohaplotig	exon	103339021	103339126	100	+	.	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 2775 2880 +
Chr2	stalkie_big_nohaplotig	exon	103339195	103339271	100	+	.	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 2881 2957 +
Chr2	stalkie_big_nohaplotig	exon	103339407	103340299	100	+	.	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 2958 3850 +
Chr2	stalkie_big_nohaplotig	exon	103340372	103340560	100	+	.	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 3851 4039 +
Chr2	stalkie_big_nohaplotig	exon	103340622	103342319	100	+	.	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 4040 5737 +
Chr2	stalkie_big_nohaplotig	exon	103342376	103342503	100	+	.	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 5738 5865 +
Chr2	stalkie_big_nohaplotig	exon	103342558	103342974	100	+	.	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 5866 6282 +
Chr2	stalkie_big_nohaplotig	exon	103343036	103343263	100	+	.	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 6283 6510 +
Chr2	stalkie_big_nohaplotig	CDS	103331943	103332060	.	+	0	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 166 283 +
Chr2	stalkie_big_nohaplotig	CDS	103332129	103332353	.	+	2	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 284 508 +
Chr2	stalkie_big_nohaplotig	CDS	103332418	103333407	.	+	2	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 509 1498 +
Chr2	stalkie_big_nohaplotig	CDS	103335242	103335427	.	+	2	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 1499 1684 +
Chr2	stalkie_big_nohaplotig	CDS	103335649	103336172	.	+	2	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 1685 2208 +
Chr2	stalkie_big_nohaplotig	CDS	103337543	103337752	.	+	0	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 2209 2418 +
Chr2	stalkie_big_nohaplotig	CDS	103337819	103338174	.	+	0	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 2419 2774 +
Chr2	stalkie_big_nohaplotig	CDS	103339021	103339126	.	+	1	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 2775 2880 +
Chr2	stalkie_big_nohaplotig	CDS	103339195	103339271	.	+	0	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 2881 2957 +
Chr2	stalkie_big_nohaplotig	CDS	103339407	103340299	.	+	1	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 2958 3850 +
Chr2	stalkie_big_nohaplotig	CDS	103340372	103340560	.	+	2	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 3851 4039 +
Chr2	stalkie_big_nohaplotig	CDS	103340622	103342319	.	+	2	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 4040 5737 +
Chr2	stalkie_big_nohaplotig	CDS	103342376	103342503	.	+	2	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 5738 5865 +
Chr2	stalkie_big_nohaplotig	CDS	103342558	103342974	.	+	0	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 5866 6282 +
Chr2	stalkie_big_nohaplotig	CDS	103343036	103343263	.	+	0	Parent=FBgn0259685.1.mrna1;Target=FBgn0259685.1 6283 6510 +
Chr2	gffcl	locus	103336546	103337421	.	-	.	ID=RLOC_00020104;geneIDs=comp117557_c0_seq1.path1;transcripts=comp117557_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103336546	103337421	.	-	.	ID=comp117557_c0_seq1.mrna1;geneID=comp117557_c0_seq1.path1;Name=comp117557_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.3;matches=871;mismatches=5;indels=1;unknowns=0;Target=comp117557_c0_seq1 877 1 .;CDS_Target=comp117557_c0_seq1 502 206 .;locus=RLOC_00020104
Chr2	stalkie_big_nohaplotig	exon	103336546	103337421	99	-	.	Parent=comp117557_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103336921	103337216	.	-	0	Parent=comp117557_c0_seq1.mrna1
Chr2	gffcl	locus	103345796	103350321	.	-	.	ID=RLOC_00020105;geneIDs=FBgn0028471.1.path1;transcripts=FBgn0028471.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103345796	103350321	.	-	.	ID=FBgn0028471.1.mrna1;geneID=FBgn0028471.1.path1;Name=FBgn0028471.1;Dir=sensecoverage=100.0;identity=100.0;matches=3156;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020105
Chr2	stalkie_big_nohaplotig	exon	103345796	103346022	100	-	.	Parent=FBgn0028471.1.mrna1;Target=FBgn0028471.1 2930 3156 +
Chr2	stalkie_big_nohaplotig	exon	103346090	103346356	100	-	.	Parent=FBgn0028471.1.mrna1;Target=FBgn0028471.1 2663 2929 +
Chr2	stalkie_big_nohaplotig	exon	103346412	103347113	100	-	.	Parent=FBgn0028471.1.mrna1;Target=FBgn0028471.1 1961 2662 +
Chr2	stalkie_big_nohaplotig	exon	103348111	103348193	100	-	.	Parent=FBgn0028471.1.mrna1;Target=FBgn0028471.1 1878 1960 +
Chr2	stalkie_big_nohaplotig	exon	103348256	103349241	100	-	.	Parent=FBgn0028471.1.mrna1;Target=FBgn0028471.1 892 1877 +
Chr2	stalkie_big_nohaplotig	exon	103349305	103349864	100	-	.	Parent=FBgn0028471.1.mrna1;Target=FBgn0028471.1 332 891 +
Chr2	stalkie_big_nohaplotig	exon	103349917	103350142	100	-	.	Parent=FBgn0028471.1.mrna1;Target=FBgn0028471.1 106 331 +
Chr2	stalkie_big_nohaplotig	exon	103350217	103350321	100	-	.	Parent=FBgn0028471.1.mrna1;Target=FBgn0028471.1 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	103345796	103346022	.	-	2	Parent=FBgn0028471.1.mrna1;Target=FBgn0028471.1 2930 3156 +
Chr2	stalkie_big_nohaplotig	CDS	103346090	103346356	.	-	2	Parent=FBgn0028471.1.mrna1;Target=FBgn0028471.1 2663 2929 +
Chr2	stalkie_big_nohaplotig	CDS	103346412	103347113	.	-	2	Parent=FBgn0028471.1.mrna1;Target=FBgn0028471.1 1961 2662 +
Chr2	stalkie_big_nohaplotig	CDS	103348111	103348193	.	-	1	Parent=FBgn0028471.1.mrna1;Target=FBgn0028471.1 1878 1960 +
Chr2	stalkie_big_nohaplotig	CDS	103348256	103349241	.	-	0	Parent=FBgn0028471.1.mrna1;Target=FBgn0028471.1 892 1877 +
Chr2	stalkie_big_nohaplotig	CDS	103349305	103349864	.	-	2	Parent=FBgn0028471.1.mrna1;Target=FBgn0028471.1 332 891 +
Chr2	stalkie_big_nohaplotig	CDS	103349917	103350142	.	-	0	Parent=FBgn0028471.1.mrna1;Target=FBgn0028471.1 106 331 +
Chr2	stalkie_big_nohaplotig	CDS	103350217	103350321	.	-	0	Parent=FBgn0028471.1.mrna1;Target=FBgn0028471.1 1 105 +
Chr2	gffcl	locus	103356725	103361038	.	.	.	ID=RLOC_00020106;geneIDs=FBgn0000064.1.path1,comp144072_c0_seq1.path1;transcripts=FBgn0000064.1.mrna1,comp144072_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103356725	103361038	.	+	.	ID=FBgn0000064.1.mrna1;geneID=FBgn0000064.1.path1;Name=FBgn0000064.1;Dir=sensecoverage=100.0;identity=100.0;matches=1110;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020106
Chr2	stalkie_big_nohaplotig	exon	103356725	103357121	100	+	.	Parent=FBgn0000064.1.mrna1;Target=FBgn0000064.1 1 397 +
Chr2	stalkie_big_nohaplotig	exon	103357242	103357661	100	+	.	Parent=FBgn0000064.1.mrna1;Target=FBgn0000064.1 398 817 +
Chr2	stalkie_big_nohaplotig	exon	103357721	103357920	100	+	.	Parent=FBgn0000064.1.mrna1;Target=FBgn0000064.1 818 1017 +
Chr2	stalkie_big_nohaplotig	exon	103360946	103361038	100	+	.	Parent=FBgn0000064.1.mrna1;Target=FBgn0000064.1 1018 1110 +
Chr2	stalkie_big_nohaplotig	CDS	103356725	103357121	.	+	0	Parent=FBgn0000064.1.mrna1;Target=FBgn0000064.1 1 397 +
Chr2	stalkie_big_nohaplotig	CDS	103357242	103357661	.	+	2	Parent=FBgn0000064.1.mrna1;Target=FBgn0000064.1 398 817 +
Chr2	stalkie_big_nohaplotig	CDS	103357721	103357920	.	+	2	Parent=FBgn0000064.1.mrna1;Target=FBgn0000064.1 818 1017 +
Chr2	stalkie_big_nohaplotig	CDS	103360946	103361038	.	+	0	Parent=FBgn0000064.1.mrna1;Target=FBgn0000064.1 1018 1110 +
Chr2	stalkie_big_nohaplotig	mRNA	103360321	103360966	.	-	.	ID=comp144072_c0_seq1.mrna1;geneID=comp144072_c0_seq1.path1;Name=comp144072_c0_seq1;Dir=indeterminatecoverage=99.5;identity=100.0;matches=646;mismatches=0;indels=0;unknowns=0;Target=comp144072_c0_seq1 646 1 .;CDS_Target=comp144072_c0_seq1 556 470 .;locus=RLOC_00020106
Chr2	stalkie_big_nohaplotig	exon	103360321	103360966	100	-	.	Parent=comp144072_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103360411	103360497	.	-	0	Parent=comp144072_c0_seq1.mrna1
Chr2	gffcl	locus	103387397	103388075	.	-	.	ID=RLOC_00020109;geneIDs=comp134882_c0_seq1.path1;transcripts=comp134882_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103387397	103388075	.	-	.	ID=comp134882_c0_seq1.mrna1;geneID=comp134882_c0_seq1.path1;Name=comp134882_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=553;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020109
Chr2	stalkie_big_nohaplotig	exon	103387397	103387835	100	-	.	Parent=comp134882_c0_seq1.mrna1;Target=comp134882_c0_seq1 115 553 +
Chr2	stalkie_big_nohaplotig	exon	103387891	103387980	100	-	.	Parent=comp134882_c0_seq1.mrna1;Target=comp134882_c0_seq1 25 114 +
Chr2	stalkie_big_nohaplotig	exon	103388052	103388075	100	-	.	Parent=comp134882_c0_seq1.mrna1;Target=comp134882_c0_seq1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	103387801	103387835	.	-	2	Parent=comp134882_c0_seq1.mrna1;Target=comp134882_c0_seq1 115 149 +
Chr2	stalkie_big_nohaplotig	CDS	103387891	103387980	.	-	2	Parent=comp134882_c0_seq1.mrna1;Target=comp134882_c0_seq1 25 114 +
Chr2	stalkie_big_nohaplotig	CDS	103388052	103388073	.	-	0	Parent=comp134882_c0_seq1.mrna1;Target=comp134882_c0_seq1 3 24 +
Chr2	gffcl	locus	103388146	103389102	.	-	.	ID=RLOC_00020110;geneIDs=FBgn0037342.1.path1;transcripts=FBgn0037342.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103388146	103389102	.	-	.	ID=FBgn0037342.1.mrna1;geneID=FBgn0037342.1.path1;Name=FBgn0037342.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=957;mismatches=0;indels=0;unknowns=0;Target=FBgn0037342.1 957 1 .;locus=RLOC_00020110
Chr2	stalkie_big_nohaplotig	exon	103388146	103389102	100	-	.	Parent=FBgn0037342.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103388146	103389102	.	-	0	Parent=FBgn0037342.1.mrna1
Chr2	gffcl	locus	103390723	103392878	.	+	.	ID=RLOC_00020111;geneIDs=FBgn0038578.1.path1;transcripts=FBgn0038578.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103390723	103392878	.	+	.	ID=FBgn0038578.1.mrna1;geneID=FBgn0038578.1.path1;Name=FBgn0038578.1;Dir=sensecoverage=100.0;identity=100.0;matches=1932;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020111
Chr2	stalkie_big_nohaplotig	exon	103390723	103390841	100	+	.	Parent=FBgn0038578.1.mrna1;Target=FBgn0038578.1 1 119 +
Chr2	stalkie_big_nohaplotig	exon	103390895	103391633	100	+	.	Parent=FBgn0038578.1.mrna1;Target=FBgn0038578.1 120 858 +
Chr2	stalkie_big_nohaplotig	exon	103391696	103392267	100	+	.	Parent=FBgn0038578.1.mrna1;Target=FBgn0038578.1 859 1430 +
Chr2	stalkie_big_nohaplotig	exon	103392320	103392740	100	+	.	Parent=FBgn0038578.1.mrna1;Target=FBgn0038578.1 1431 1851 +
Chr2	stalkie_big_nohaplotig	exon	103392798	103392878	100	+	.	Parent=FBgn0038578.1.mrna1;Target=FBgn0038578.1 1852 1932 +
Chr2	stalkie_big_nohaplotig	CDS	103390723	103390841	.	+	0	Parent=FBgn0038578.1.mrna1;Target=FBgn0038578.1 1 119 +
Chr2	stalkie_big_nohaplotig	CDS	103390895	103391633	.	+	1	Parent=FBgn0038578.1.mrna1;Target=FBgn0038578.1 120 858 +
Chr2	stalkie_big_nohaplotig	CDS	103391696	103392267	.	+	0	Parent=FBgn0038578.1.mrna1;Target=FBgn0038578.1 859 1430 +
Chr2	stalkie_big_nohaplotig	CDS	103392320	103392740	.	+	1	Parent=FBgn0038578.1.mrna1;Target=FBgn0038578.1 1431 1851 +
Chr2	stalkie_big_nohaplotig	CDS	103392798	103392878	.	+	0	Parent=FBgn0038578.1.mrna1;Target=FBgn0038578.1 1852 1932 +
Chr2	gffcl	locus	103395091	103396148	.	+	.	ID=RLOC_00020112;geneIDs=FBgn0038858.1.path1;transcripts=FBgn0038858.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103395091	103396148	.	+	.	ID=FBgn0038858.1.mrna1;geneID=FBgn0038858.1.path1;Name=FBgn0038858.1;Dir=sensecoverage=100.0;identity=100.0;matches=735;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020112
Chr2	stalkie_big_nohaplotig	exon	103395091	103395130	100	+	.	Parent=FBgn0038858.1.mrna1;Target=FBgn0038858.1 1 40 +
Chr2	stalkie_big_nohaplotig	exon	103395258	103395369	100	+	.	Parent=FBgn0038858.1.mrna1;Target=FBgn0038858.1 41 152 +
Chr2	stalkie_big_nohaplotig	exon	103395437	103395533	100	+	.	Parent=FBgn0038858.1.mrna1;Target=FBgn0038858.1 153 249 +
Chr2	stalkie_big_nohaplotig	exon	103395608	103395754	100	+	.	Parent=FBgn0038858.1.mrna1;Target=FBgn0038858.1 250 396 +
Chr2	stalkie_big_nohaplotig	exon	103395810	103396148	100	+	.	Parent=FBgn0038858.1.mrna1;Target=FBgn0038858.1 397 735 +
Chr2	stalkie_big_nohaplotig	CDS	103395091	103395130	.	+	0	Parent=FBgn0038858.1.mrna1;Target=FBgn0038858.1 1 40 +
Chr2	stalkie_big_nohaplotig	CDS	103395258	103395369	.	+	2	Parent=FBgn0038858.1.mrna1;Target=FBgn0038858.1 41 152 +
Chr2	stalkie_big_nohaplotig	CDS	103395437	103395533	.	+	1	Parent=FBgn0038858.1.mrna1;Target=FBgn0038858.1 153 249 +
Chr2	stalkie_big_nohaplotig	CDS	103395608	103395754	.	+	0	Parent=FBgn0038858.1.mrna1;Target=FBgn0038858.1 250 396 +
Chr2	stalkie_big_nohaplotig	CDS	103395810	103396148	.	+	0	Parent=FBgn0038858.1.mrna1;Target=FBgn0038858.1 397 735 +
Chr2	gffcl	locus	103396271	103396780	.	-	.	ID=RLOC_00020113;geneIDs=FBgn0037340.1.path1;transcripts=FBgn0037340.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103396271	103396780	.	-	.	ID=FBgn0037340.1.mrna1;geneID=FBgn0037340.1.path1;Name=FBgn0037340.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=510;mismatches=0;indels=0;unknowns=0;Target=FBgn0037340.1 510 1 .;locus=RLOC_00020113
Chr2	stalkie_big_nohaplotig	exon	103396271	103396780	100	-	.	Parent=FBgn0037340.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103396271	103396780	.	-	0	Parent=FBgn0037340.1.mrna1
Chr2	gffcl	locus	103399379	103404320	.	+	.	ID=RLOC_00020114;geneIDs=FBgn0037341.1.path1;transcripts=FBgn0037341.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103399379	103404320	.	+	.	ID=FBgn0037341.1.mrna1;geneID=FBgn0037341.1.path1;Name=FBgn0037341.1;Dir=sensecoverage=100.0;identity=100.0;matches=1395;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020114
Chr2	stalkie_big_nohaplotig	exon	103399379	103399540	100	+	.	Parent=FBgn0037341.1.mrna1;Target=FBgn0037341.1 1 162 +
Chr2	stalkie_big_nohaplotig	exon	103400011	103400390	100	+	.	Parent=FBgn0037341.1.mrna1;Target=FBgn0037341.1 163 542 +
Chr2	stalkie_big_nohaplotig	exon	103403401	103403819	100	+	.	Parent=FBgn0037341.1.mrna1;Target=FBgn0037341.1 543 961 +
Chr2	stalkie_big_nohaplotig	exon	103403887	103404320	100	+	.	Parent=FBgn0037341.1.mrna1;Target=FBgn0037341.1 962 1395 +
Chr2	stalkie_big_nohaplotig	CDS	103399379	103399540	.	+	0	Parent=FBgn0037341.1.mrna1;Target=FBgn0037341.1 1 162 +
Chr2	stalkie_big_nohaplotig	CDS	103400011	103400390	.	+	0	Parent=FBgn0037341.1.mrna1;Target=FBgn0037341.1 163 542 +
Chr2	stalkie_big_nohaplotig	CDS	103403401	103403819	.	+	1	Parent=FBgn0037341.1.mrna1;Target=FBgn0037341.1 543 961 +
Chr2	stalkie_big_nohaplotig	CDS	103403887	103404320	.	+	2	Parent=FBgn0037341.1.mrna1;Target=FBgn0037341.1 962 1395 +
Chr2	gffcl	locus	103407764	103409029	.	+	.	ID=RLOC_00020115;geneIDs=comp143252_c0_seq1.path1;transcripts=comp143252_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103407764	103409029	.	+	.	ID=comp143252_c0_seq1.mrna1;geneID=comp143252_c0_seq1.path1;Name=comp143252_c0_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=1207;mismatches=3;indels=5;unknowns=0;locus=RLOC_00020115
Chr2	stalkie_big_nohaplotig	exon	103407764	103408444	99	+	.	Parent=comp143252_c0_seq1.mrna1;Target=comp143252_c0_seq1 530 1215 -
Chr2	stalkie_big_nohaplotig	exon	103408501	103409029	99	+	.	Parent=comp143252_c0_seq1.mrna1;Target=comp143252_c0_seq1 1 529 -
Chr2	stalkie_big_nohaplotig	CDS	103408109	103408444	.	+	0	Parent=comp143252_c0_seq1.mrna1;Target=comp143252_c0_seq1 530 865 .
Chr2	stalkie_big_nohaplotig	CDS	103408501	103408734	.	+	0	Parent=comp143252_c0_seq1.mrna1;Target=comp143252_c0_seq1 296 529 .
Chr2	gffcl	locus	103410881	103414213	.	-	.	ID=RLOC_00020116;geneIDs=comp163696_c0_seq1.path1;transcripts=comp163696_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103410881	103414213	.	-	.	ID=comp163696_c0_seq1.mrna1;geneID=comp163696_c0_seq1.path1;Name=comp163696_c0_seq1;Dir=sensecoverage=99.0;identity=99.3;matches=815;mismatches=6;indels=0;unknowns=0;locus=RLOC_00020116
Chr2	stalkie_big_nohaplotig	exon	103410881	103411197	98	-	.	Parent=comp163696_c0_seq1.mrna1;Target=comp163696_c0_seq1 513 829 +
Chr2	stalkie_big_nohaplotig	exon	103412736	103413007	100	-	.	Parent=comp163696_c0_seq1.mrna1;Target=comp163696_c0_seq1 241 512 +
Chr2	stalkie_big_nohaplotig	exon	103413982	103414213	100	-	.	Parent=comp163696_c0_seq1.mrna1;Target=comp163696_c0_seq1 9 240 +
Chr2	stalkie_big_nohaplotig	CDS	103411122	103411197	.	-	1	Parent=comp163696_c0_seq1.mrna1;Target=comp163696_c0_seq1 513 588 +
Chr2	stalkie_big_nohaplotig	CDS	103412736	103412830	.	-	0	Parent=comp163696_c0_seq1.mrna1;Target=comp163696_c0_seq1 418 512 +
Chr2	gffcl	locus	103426031	103426789	.	+	.	ID=RLOC_00020118;geneIDs=comp135791_c0_seq1.path1;transcripts=comp135791_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103426031	103426789	.	+	.	ID=comp135791_c0_seq1.mrna1;geneID=comp135791_c0_seq1.path1;Name=comp135791_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=758;mismatches=0;indels=1;unknowns=0;Target=comp135791_c0_seq1 758 1 .;CDS_Target=comp135791_c0_seq1 94 2 .;locus=RLOC_00020118
Chr2	stalkie_big_nohaplotig	exon	103426031	103426789	99	+	.	Parent=comp135791_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103426032	103426124	.	+	0	Parent=comp135791_c0_seq1.mrna1
Chr2	gffcl	locus	103431852	103433963	.	-	.	ID=RLOC_00020119;geneIDs=CPIJ017423.2.path1;transcripts=CPIJ017423.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103431852	103433963	.	-	.	ID=CPIJ017423.2.mrna1;geneID=CPIJ017423.2.path1;Name=CPIJ017423.2;Dir=indeterminatecoverage=100.0;identity=98.0;matches=1505;mismatches=27;indels=3;unknowns=0;Target=CPIJ017423.2 83 81 .;locus=RLOC_00020119
Chr2	stalkie_big_nohaplotig	exon	103431852	103433125	99	-	.	Parent=CPIJ017423.2.mrna1;Target=CPIJ017423.2 1551 278 .
Chr2	stalkie_big_nohaplotig	exon	103433342	103433519	91	-	.	Parent=CPIJ017423.2.mrna1;Target=CPIJ017423.2 277 103 .
Chr2	stalkie_big_nohaplotig	exon	103433881	103433963	90	-	.	Parent=CPIJ017423.2.mrna1;Target=CPIJ017423.2 83 1 .
Chr2	stalkie_big_nohaplotig	CDS	103433881	103433883	.	-	0	Parent=CPIJ017423.2.mrna1
Chr2	gffcl	locus	103454804	103457683	.	+	.	ID=RLOC_00020120;geneIDs=FBgn0028499.1.path1;transcripts=FBgn0028499.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103454804	103457683	.	+	.	ID=FBgn0028499.1.mrna1;geneID=FBgn0028499.1.path1;Name=FBgn0028499.1;Dir=sensecoverage=100.0;identity=100.0;matches=2238;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020120
Chr2	stalkie_big_nohaplotig	exon	103454804	103454950	100	+	.	Parent=FBgn0028499.1.mrna1;Target=FBgn0028499.1 1 147 +
Chr2	stalkie_big_nohaplotig	exon	103455125	103455673	100	+	.	Parent=FBgn0028499.1.mrna1;Target=FBgn0028499.1 148 696 +
Chr2	stalkie_big_nohaplotig	exon	103455880	103456023	100	+	.	Parent=FBgn0028499.1.mrna1;Target=FBgn0028499.1 697 840 +
Chr2	stalkie_big_nohaplotig	exon	103456084	103456766	100	+	.	Parent=FBgn0028499.1.mrna1;Target=FBgn0028499.1 841 1523 +
Chr2	stalkie_big_nohaplotig	exon	103456847	103457047	100	+	.	Parent=FBgn0028499.1.mrna1;Target=FBgn0028499.1 1524 1724 +
Chr2	stalkie_big_nohaplotig	exon	103457111	103457420	100	+	.	Parent=FBgn0028499.1.mrna1;Target=FBgn0028499.1 1725 2034 +
Chr2	stalkie_big_nohaplotig	exon	103457480	103457683	100	+	.	Parent=FBgn0028499.1.mrna1;Target=FBgn0028499.1 2035 2238 +
Chr2	stalkie_big_nohaplotig	CDS	103454804	103454950	.	+	0	Parent=FBgn0028499.1.mrna1;Target=FBgn0028499.1 1 147 +
Chr2	stalkie_big_nohaplotig	CDS	103455125	103455673	.	+	0	Parent=FBgn0028499.1.mrna1;Target=FBgn0028499.1 148 696 +
Chr2	stalkie_big_nohaplotig	CDS	103455880	103456023	.	+	0	Parent=FBgn0028499.1.mrna1;Target=FBgn0028499.1 697 840 +
Chr2	stalkie_big_nohaplotig	CDS	103456084	103456766	.	+	0	Parent=FBgn0028499.1.mrna1;Target=FBgn0028499.1 841 1523 +
Chr2	stalkie_big_nohaplotig	CDS	103456847	103457047	.	+	1	Parent=FBgn0028499.1.mrna1;Target=FBgn0028499.1 1524 1724 +
Chr2	stalkie_big_nohaplotig	CDS	103457111	103457420	.	+	1	Parent=FBgn0028499.1.mrna1;Target=FBgn0028499.1 1725 2034 +
Chr2	stalkie_big_nohaplotig	CDS	103457480	103457683	.	+	0	Parent=FBgn0028499.1.mrna1;Target=FBgn0028499.1 2035 2238 +
Chr2	gffcl	locus	103461307	103463918	.	+	.	ID=RLOC_00020121;geneIDs=FBgn0038581.1.path1;transcripts=FBgn0038581.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103461307	103463918	.	+	.	ID=FBgn0038581.1.mrna1;geneID=FBgn0038581.1.path1;Name=FBgn0038581.1;Dir=sensecoverage=100.0;identity=99.9;matches=1241;mismatches=0;indels=1;unknowns=0;locus=RLOC_00020121
Chr2	stalkie_big_nohaplotig	exon	103461307	103461365	100	+	.	Parent=FBgn0038581.1.mrna1;Target=FBgn0038581.1 1 59 +
Chr2	stalkie_big_nohaplotig	exon	103461526	103461707	99	+	.	Parent=FBgn0038581.1.mrna1;Target=FBgn0038581.1 60 242 +
Chr2	stalkie_big_nohaplotig	exon	103462524	103462648	100	+	.	Parent=FBgn0038581.1.mrna1;Target=FBgn0038581.1 243 367 +
Chr2	stalkie_big_nohaplotig	exon	103462744	103462985	100	+	.	Parent=FBgn0038581.1.mrna1;Target=FBgn0038581.1 368 609 +
Chr2	stalkie_big_nohaplotig	exon	103463053	103463250	100	+	.	Parent=FBgn0038581.1.mrna1;Target=FBgn0038581.1 610 807 +
Chr2	stalkie_big_nohaplotig	exon	103463307	103463515	100	+	.	Parent=FBgn0038581.1.mrna1;Target=FBgn0038581.1 808 1016 +
Chr2	stalkie_big_nohaplotig	exon	103463693	103463918	100	+	.	Parent=FBgn0038581.1.mrna1;Target=FBgn0038581.1 1017 1242 +
Chr2	stalkie_big_nohaplotig	CDS	103461309	103461365	.	+	0	Parent=FBgn0038581.1.mrna1;Target=FBgn0038581.1 3 59 +
Chr2	stalkie_big_nohaplotig	CDS	103461526	103461677	.	+	0	Parent=FBgn0038581.1.mrna1;Target=FBgn0038581.1 60 212 +
Chr2	gffcl	locus	103464689	103466461	.	-	.	ID=RLOC_00020122;geneIDs=FBgn0038583.1.path1;transcripts=FBgn0038583.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103464689	103466461	.	-	.	ID=FBgn0038583.1.mrna1;geneID=FBgn0038583.1.path1;Name=FBgn0038583.1;Dir=sensecoverage=100.0;identity=99.6;matches=1704;mismatches=6;indels=0;unknowns=0;locus=RLOC_00020122
Chr2	stalkie_big_nohaplotig	exon	103464689	103465912	99	-	.	Parent=FBgn0038583.1.mrna1;Target=FBgn0038583.1 487 1710 +
Chr2	stalkie_big_nohaplotig	exon	103465976	103466461	99	-	.	Parent=FBgn0038583.1.mrna1;Target=FBgn0038583.1 1 486 +
Chr2	stalkie_big_nohaplotig	CDS	103464689	103465912	.	-	0	Parent=FBgn0038583.1.mrna1;Target=FBgn0038583.1 487 1710 +
Chr2	stalkie_big_nohaplotig	CDS	103465976	103466461	.	-	0	Parent=FBgn0038583.1.mrna1;Target=FBgn0038583.1 1 486 +
Chr2	gffcl	locus	103467815	103495045	.	+	.	ID=RLOC_00020123;geneIDs=FBgn0037339.1.path1;transcripts=FBgn0037339.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103467815	103495045	.	+	.	ID=FBgn0037339.1.mrna1;geneID=FBgn0037339.1.path1;Name=FBgn0037339.1;Dir=sensecoverage=100.0;identity=100.0;matches=2145;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020123
Chr2	stalkie_big_nohaplotig	exon	103467815	103468027	100	+	.	Parent=FBgn0037339.1.mrna1;Target=FBgn0037339.1 1 213 +
Chr2	stalkie_big_nohaplotig	exon	103468290	103468935	100	+	.	Parent=FBgn0037339.1.mrna1;Target=FBgn0037339.1 214 859 +
Chr2	stalkie_big_nohaplotig	exon	103485523	103485641	100	+	.	Parent=FBgn0037339.1.mrna1;Target=FBgn0037339.1 860 978 +
Chr2	stalkie_big_nohaplotig	exon	103485914	103486240	100	+	.	Parent=FBgn0037339.1.mrna1;Target=FBgn0037339.1 979 1305 +
Chr2	stalkie_big_nohaplotig	exon	103486305	103486928	100	+	.	Parent=FBgn0037339.1.mrna1;Target=FBgn0037339.1 1306 1929 +
Chr2	stalkie_big_nohaplotig	exon	103486992	103487131	100	+	.	Parent=FBgn0037339.1.mrna1;Target=FBgn0037339.1 1930 2069 +
Chr2	stalkie_big_nohaplotig	exon	103494970	103495045	100	+	.	Parent=FBgn0037339.1.mrna1;Target=FBgn0037339.1 2070 2145 +
Chr2	stalkie_big_nohaplotig	CDS	103467815	103468027	.	+	0	Parent=FBgn0037339.1.mrna1;Target=FBgn0037339.1 1 213 +
Chr2	stalkie_big_nohaplotig	CDS	103468290	103468935	.	+	0	Parent=FBgn0037339.1.mrna1;Target=FBgn0037339.1 214 859 +
Chr2	stalkie_big_nohaplotig	CDS	103485523	103485641	.	+	2	Parent=FBgn0037339.1.mrna1;Target=FBgn0037339.1 860 978 +
Chr2	stalkie_big_nohaplotig	CDS	103485914	103486240	.	+	0	Parent=FBgn0037339.1.mrna1;Target=FBgn0037339.1 979 1305 +
Chr2	stalkie_big_nohaplotig	CDS	103486305	103486928	.	+	0	Parent=FBgn0037339.1.mrna1;Target=FBgn0037339.1 1306 1929 +
Chr2	stalkie_big_nohaplotig	CDS	103486992	103487131	.	+	0	Parent=FBgn0037339.1.mrna1;Target=FBgn0037339.1 1930 2069 +
Chr2	stalkie_big_nohaplotig	CDS	103494970	103495045	.	+	1	Parent=FBgn0037339.1.mrna1;Target=FBgn0037339.1 2070 2145 +
Chr2	gffcl	locus	103488828	103491297	.	+	.	ID=RLOC_00020124;geneIDs=comp161317_c0_seq1.path1;transcripts=comp161317_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103488828	103491297	.	+	.	ID=comp161317_c0_seq1.mrna1;geneID=comp161317_c0_seq1.path1;Name=comp161317_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=2457;mismatches=13;indels=0;unknowns=0;Target=comp161317_c0_seq1 2470 1 .;CDS_Target=comp161317_c0_seq1 505 131 .;locus=RLOC_00020124
Chr2	stalkie_big_nohaplotig	exon	103488828	103491297	99	+	.	Parent=comp161317_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103488958	103489332	.	+	0	Parent=comp161317_c0_seq1.mrna1
Chr2	gffcl	locus	103497015	103497492	.	+	.	ID=RLOC_00020125;geneIDs=comp157122_c0_seq1.path4;transcripts=comp157122_c0_seq1.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	103497015	103497492	.	+	.	ID=comp157122_c0_seq1.mrna4;geneID=comp157122_c0_seq1.path4;Name=comp157122_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=472;mismatches=6;indels=2;unknowns=0;Target=comp157122_c0_seq1 480 1 .;CDS_Target=comp157122_c0_seq1 480 244 .;locus=RLOC_00020125
Chr2	stalkie_big_nohaplotig	exon	103497015	103497492	98	+	.	Parent=comp157122_c0_seq1.mrna4
Chr2	stalkie_big_nohaplotig	CDS	103497256	103497492	.	+	0	Parent=comp157122_c0_seq1.mrna4
Chr2	gffcl	locus	103505189	103506460	.	-	.	ID=RLOC_00020127;geneIDs=comp152037_c0_seq1.path1;transcripts=comp152037_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103505189	103506460	.	-	.	ID=comp152037_c0_seq1.mrna1;geneID=comp152037_c0_seq1.path1;Name=comp152037_c0_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=1183;mismatches=3;indels=8;unknowns=0;Target=comp152037_c0_seq1 300 446 .;locus=RLOC_00020127
Chr2	stalkie_big_nohaplotig	exon	103505189	103505785	99	-	.	Parent=comp152037_c0_seq1.mrna1;Target=comp152037_c0_seq1 1 597 -
Chr2	stalkie_big_nohaplotig	exon	103505872	103506460	98	-	.	Parent=comp152037_c0_seq1.mrna1;Target=comp152037_c0_seq1 598 1194 -
Chr2	stalkie_big_nohaplotig	CDS	103505488	103505634	.	-	0	Parent=comp152037_c0_seq1.mrna1
Chr2	gffcl	locus	103507371	103509941	.	+	.	ID=RLOC_00020128;geneIDs=FBgn0037265.1.path1;transcripts=FBgn0037265.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103507371	103509941	.	+	.	ID=FBgn0037265.1.mrna1;geneID=FBgn0037265.1.path1;Name=FBgn0037265.1;Dir=sensecoverage=99.5;identity=99.9;matches=1711;mismatches=1;indels=1;unknowns=0;locus=RLOC_00020128
Chr2	stalkie_big_nohaplotig	exon	103507371	103507970	100	+	.	Parent=FBgn0037265.1.mrna1;Target=FBgn0037265.1 10 609 +
Chr2	stalkie_big_nohaplotig	exon	103508760	103509625	99	+	.	Parent=FBgn0037265.1.mrna1;Target=FBgn0037265.1 610 1475 +
Chr2	stalkie_big_nohaplotig	exon	103509696	103509941	99	+	.	Parent=FBgn0037265.1.mrna1;Target=FBgn0037265.1 1476 1722 +
Chr2	stalkie_big_nohaplotig	CDS	103507371	103507970	.	+	0	Parent=FBgn0037265.1.mrna1;Target=FBgn0037265.1 10 609 +
Chr2	stalkie_big_nohaplotig	CDS	103508760	103509625	.	+	0	Parent=FBgn0037265.1.mrna1;Target=FBgn0037265.1 610 1475 +
Chr2	stalkie_big_nohaplotig	CDS	103509696	103509941	.	+	1	Parent=FBgn0037265.1.mrna1;Target=FBgn0037265.1 1476 1722 +
Chr2	gffcl	locus	103510161	103511061	.	-	.	ID=RLOC_00020129;geneIDs=comp157266_c0_seq1.path1;transcripts=comp157266_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103510161	103511061	.	-	.	ID=comp157266_c0_seq1.mrna1;geneID=comp157266_c0_seq1.path1;Name=comp157266_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.0;matches=892;mismatches=9;indels=0;unknowns=0;Target=comp157266_c0_seq1 901 1 .;CDS_Target=comp157266_c0_seq1 804 658 .;locus=RLOC_00020129
Chr2	stalkie_big_nohaplotig	exon	103510161	103511061	99	-	.	Parent=comp157266_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103510258	103510404	.	-	0	Parent=comp157266_c0_seq1.mrna1
Chr2	gffcl	locus	103511100	103511557	.	+	.	ID=RLOC_00020130;geneIDs=comp130515_c0_seq1.path1;transcripts=comp130515_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103511100	103511557	.	+	.	ID=comp130515_c0_seq1.mrna1;geneID=comp130515_c0_seq1.path1;Name=comp130515_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=458;mismatches=0;indels=0;unknowns=0;Target=comp130515_c0_seq1 458 1 .;CDS_Target=comp130515_c0_seq1 385 302 .;locus=RLOC_00020130
Chr2	stalkie_big_nohaplotig	exon	103511100	103511557	100	+	.	Parent=comp130515_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103511401	103511484	.	+	0	Parent=comp130515_c0_seq1.mrna1
Chr2	gffcl	locus	103512974	103516957	.	-	.	ID=RLOC_00020131;geneIDs=FBgn0037944.1.path1;transcripts=FBgn0037944.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103512974	103516957	.	-	.	ID=FBgn0037944.1.mrna1;geneID=FBgn0037944.1.path1;Name=FBgn0037944.1;Dir=sensecoverage=100.0;identity=99.8;matches=3022;mismatches=4;indels=1;unknowns=0;Target=FBgn0037944.1 3 137 +;locus=RLOC_00020131
Chr2	stalkie_big_nohaplotig	exon	103512974	103513103	100	-	.	Parent=FBgn0037944.1.mrna1;Target=FBgn0037944.1 2898 3027 +
Chr2	stalkie_big_nohaplotig	exon	103513178	103513302	99	-	.	Parent=FBgn0037944.1.mrna1;Target=FBgn0037944.1 2773 2897 +
Chr2	stalkie_big_nohaplotig	exon	103514035	103514205	99	-	.	Parent=FBgn0037944.1.mrna1;Target=FBgn0037944.1 2602 2772 +
Chr2	stalkie_big_nohaplotig	exon	103514280	103516196	99	-	.	Parent=FBgn0037944.1.mrna1;Target=FBgn0037944.1 685 2601 +
Chr2	stalkie_big_nohaplotig	exon	103516275	103516957	99	-	.	Parent=FBgn0037944.1.mrna1;Target=FBgn0037944.1 1 684 +
Chr2	stalkie_big_nohaplotig	CDS	103516822	103516955	.	-	0	Parent=FBgn0037944.1.mrna1
Chr2	gffcl	locus	103527938	103534509	.	+	.	ID=RLOC_00020132;geneIDs=FBgn0037468.1.path1;transcripts=FBgn0037468.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103527938	103534509	.	+	.	ID=FBgn0037468.1.mrna1;geneID=FBgn0037468.1.path1;Name=FBgn0037468.1;Dir=sensecoverage=100.0;identity=100.0;matches=459;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020132
Chr2	stalkie_big_nohaplotig	exon	103527938	103527972	100	+	.	Parent=FBgn0037468.1.mrna1;Target=FBgn0037468.1 1 35 +
Chr2	stalkie_big_nohaplotig	exon	103534086	103534509	100	+	.	Parent=FBgn0037468.1.mrna1;Target=FBgn0037468.1 36 459 +
Chr2	stalkie_big_nohaplotig	CDS	103527938	103527972	.	+	0	Parent=FBgn0037468.1.mrna1;Target=FBgn0037468.1 1 35 +
Chr2	stalkie_big_nohaplotig	CDS	103534086	103534509	.	+	1	Parent=FBgn0037468.1.mrna1;Target=FBgn0037468.1 36 459 +
Chr2	gffcl	locus	103537045	103542457	.	.	.	ID=RLOC_00020133;geneIDs=FBgn0037715.2.path1,comp157318_c0_seq1.path1;transcripts=FBgn0037715.2.mrna1,comp157318_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103537045	103542457	.	-	.	ID=FBgn0037715.2.mrna1;geneID=FBgn0037715.2.path1;Name=FBgn0037715.2;Dir=sensecoverage=100.0;identity=100.0;matches=465;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020133
Chr2	stalkie_big_nohaplotig	exon	103537045	103537284	100	-	.	Parent=FBgn0037715.2.mrna1;Target=FBgn0037715.2 226 465 +
Chr2	stalkie_big_nohaplotig	exon	103542096	103542136	100	-	.	Parent=FBgn0037715.2.mrna1;Target=FBgn0037715.2 185 225 +
Chr2	stalkie_big_nohaplotig	exon	103542205	103542366	100	-	.	Parent=FBgn0037715.2.mrna1;Target=FBgn0037715.2 23 184 +
Chr2	stalkie_big_nohaplotig	exon	103542436	103542457	100	-	.	Parent=FBgn0037715.2.mrna1;Target=FBgn0037715.2 1 22 +
Chr2	stalkie_big_nohaplotig	CDS	103537045	103537284	.	-	0	Parent=FBgn0037715.2.mrna1;Target=FBgn0037715.2 226 465 +
Chr2	stalkie_big_nohaplotig	CDS	103542096	103542136	.	-	2	Parent=FBgn0037715.2.mrna1;Target=FBgn0037715.2 185 225 +
Chr2	stalkie_big_nohaplotig	CDS	103542205	103542366	.	-	2	Parent=FBgn0037715.2.mrna1;Target=FBgn0037715.2 23 184 +
Chr2	stalkie_big_nohaplotig	CDS	103542436	103542457	.	-	0	Parent=FBgn0037715.2.mrna1;Target=FBgn0037715.2 1 22 +
Chr2	stalkie_big_nohaplotig	mRNA	103537235	103538267	.	+	.	ID=comp157318_c0_seq1.mrna1;geneID=comp157318_c0_seq1.path1;Name=comp157318_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1024;mismatches=9;indels=0;unknowns=0;Target=comp157318_c0_seq1 1033 1 .;CDS_Target=comp157318_c0_seq1 74 3 .;locus=RLOC_00020133
Chr2	stalkie_big_nohaplotig	exon	103537235	103538267	99	+	.	Parent=comp157318_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103537237	103537308	.	+	0	Parent=comp157318_c0_seq1.mrna1
Chr2	gffcl	locus	103539309	103539959	.	+	.	ID=RLOC_00020134;geneIDs=comp146923_c1_seq1.path1;transcripts=comp146923_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103539309	103539959	.	+	.	ID=comp146923_c1_seq1.mrna1;geneID=comp146923_c1_seq1.path1;Name=comp146923_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=648;mismatches=3;indels=0;unknowns=0;Target=comp146923_c1_seq1 651 1 .;CDS_Target=comp146923_c1_seq1 608 531 .;locus=RLOC_00020134
Chr2	stalkie_big_nohaplotig	exon	103539309	103539959	99	+	.	Parent=comp146923_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103539839	103539916	.	+	0	Parent=comp146923_c1_seq1.mrna1
Chr2	gffcl	locus	103557730	103559043	.	+	.	ID=RLOC_00020135;geneIDs=comp145262_c0_seq1.path1;transcripts=comp145262_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103557730	103559043	.	+	.	ID=comp145262_c0_seq1.mrna1;geneID=comp145262_c0_seq1.path1;Name=comp145262_c0_seq1;Dir=indeterminatecoverage=98.8;identity=98.4;matches=1296;mismatches=18;indels=3;unknowns=0;Target=comp145262_c0_seq1 1332 16 .;CDS_Target=comp145262_c0_seq1 216 16 .;locus=RLOC_00020135
Chr2	stalkie_big_nohaplotig	exon	103557730	103559043	98	+	.	Parent=comp145262_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103557730	103557930	.	+	0	Parent=comp145262_c0_seq1.mrna1
Chr2	gffcl	locus	103583286	103585165	.	+	.	ID=RLOC_00020136;geneIDs=ORF558.path1;transcripts=ORF558.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103583286	103585165	.	+	.	ID=ORF558.mrna1;geneID=ORF558.path1;Name=ORF558;Dir=sensecoverage=100.0;identity=99.5;matches=1647;mismatches=9;indels=0;unknowns=0;locus=RLOC_00020136
Chr2	stalkie_big_nohaplotig	exon	103583286	103584426	99	+	.	Parent=ORF558.mrna1;Target=ORF558 1 1141 +
Chr2	stalkie_big_nohaplotig	exon	103584493	103584604	99	+	.	Parent=ORF558.mrna1;Target=ORF558 1142 1253 +
Chr2	stalkie_big_nohaplotig	exon	103584698	103584753	98	+	.	Parent=ORF558.mrna1;Target=ORF558 1254 1309 +
Chr2	stalkie_big_nohaplotig	exon	103584819	103585165	98	+	.	Parent=ORF558.mrna1;Target=ORF558 1310 1656 +
Chr2	stalkie_big_nohaplotig	CDS	103583286	103584426	.	+	0	Parent=ORF558.mrna1;Target=ORF558 1 1141 +
Chr2	stalkie_big_nohaplotig	CDS	103584493	103584604	.	+	2	Parent=ORF558.mrna1;Target=ORF558 1142 1253 +
Chr2	stalkie_big_nohaplotig	CDS	103584698	103584753	.	+	1	Parent=ORF558.mrna1;Target=ORF558 1254 1309 +
Chr2	stalkie_big_nohaplotig	CDS	103584819	103585165	.	+	2	Parent=ORF558.mrna1;Target=ORF558 1310 1656 +
Chr2	gffcl	locus	103638655	103639409	.	+	.	ID=RLOC_00020137;geneIDs=comp115511_c1_seq1.path1;transcripts=comp115511_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103638655	103639409	.	+	.	ID=comp115511_c1_seq1.mrna1;geneID=comp115511_c1_seq1.path1;Name=comp115511_c1_seq1;Dir=antisensecoverage=96.8;identity=99.5;matches=595;mismatches=2;indels=1;unknowns=0;locus=RLOC_00020137
Chr2	stalkie_big_nohaplotig	exon	103638655	103638877	99	+	.	Parent=comp115511_c1_seq1.mrna1;Target=comp115511_c1_seq1 396 617 -
Chr2	stalkie_big_nohaplotig	exon	103639035	103639409	99	+	.	Parent=comp115511_c1_seq1.mrna1;Target=comp115511_c1_seq1 21 395 -
Chr2	stalkie_big_nohaplotig	CDS	103638782	103638877	.	+	0	Parent=comp115511_c1_seq1.mrna1;Target=comp115511_c1_seq1 396 491 .
Chr2	stalkie_big_nohaplotig	CDS	103639035	103639061	.	+	0	Parent=comp115511_c1_seq1.mrna1;Target=comp115511_c1_seq1 369 395 .
Chr2	gffcl	locus	103700740	104420172	.	.	.	ID=RLOC_00020138;geneIDs=comp104941_c0_seq1.path1,comp112400_c0_seq1.path1,comp163684_c3_seq1.path1;transcripts=comp163684_c3_seq1.mrna1,comp112400_c0_seq1.mrna1,comp104941_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103700740	104420172	.	+	.	ID=comp163684_c3_seq1.mrna1;geneID=comp163684_c3_seq1.path1;Name=comp163684_c3_seq1;Dir=indeterminatecoverage=38.3;identity=93.7;matches=833;mismatches=40;indels=16;unknowns=0;locus=RLOC_00020138
Chr2	stalkie_big_nohaplotig	exon	103700740	103700771	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 1995 1964 .
Chr2	stalkie_big_nohaplotig	exon	103703268	103703361	91	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2089 1996 .
Chr2	stalkie_big_nohaplotig	exon	103703368	103703548	90	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2285 2105 .
Chr2	stalkie_big_nohaplotig	exon	103710179	103710182	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2300 2297 .
Chr2	stalkie_big_nohaplotig	exon	103712190	103712199	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2310 2301 .
Chr2	stalkie_big_nohaplotig	exon	103716212	103716224	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2330 2318 .
Chr2	stalkie_big_nohaplotig	exon	103900559	103900578	85	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2367 2348 .
Chr2	stalkie_big_nohaplotig	exon	103912408	103912414	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2374 2368 .
Chr2	stalkie_big_nohaplotig	exon	103936957	103936958	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2376 2375 .
Chr2	stalkie_big_nohaplotig	exon	103952453	103952457	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2381 2377 .
Chr2	stalkie_big_nohaplotig	exon	103976914	103976915	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2383 2382 .
Chr2	stalkie_big_nohaplotig	exon	104008196	104008200	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2388 2384 .
Chr2	stalkie_big_nohaplotig	exon	104015269	104015274	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2394 2389 .
Chr2	stalkie_big_nohaplotig	exon	104022898	104022909	85	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2408 2395 .
Chr2	stalkie_big_nohaplotig	exon	104023049	104023051	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2411 2409 .
Chr2	stalkie_big_nohaplotig	exon	104023393	104023400	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2419 2412 .
Chr2	stalkie_big_nohaplotig	exon	104026109	104026116	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2427 2420 .
Chr2	stalkie_big_nohaplotig	exon	104026142	104026145	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2474 2471 .
Chr2	stalkie_big_nohaplotig	exon	104028603	104028611	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2483 2475 .
Chr2	stalkie_big_nohaplotig	exon	104030899	104030901	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2486 2484 .
Chr2	stalkie_big_nohaplotig	exon	104032862	104032870	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2495 2487 .
Chr2	stalkie_big_nohaplotig	exon	104038057	104038065	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2504 2496 .
Chr2	stalkie_big_nohaplotig	exon	104052967	104052969	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2555 2553 .
Chr2	stalkie_big_nohaplotig	exon	104055220	104055227	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2563 2556 .
Chr2	stalkie_big_nohaplotig	exon	104055267	104055274	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2626 2619 .
Chr2	stalkie_big_nohaplotig	exon	104055879	104055887	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2642 2634 .
Chr2	stalkie_big_nohaplotig	exon	104055921	104055927	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2704 2698 .
Chr2	stalkie_big_nohaplotig	exon	104056940	104056943	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2708 2705 .
Chr2	stalkie_big_nohaplotig	exon	104065083	104065089	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2715 2709 .
Chr2	stalkie_big_nohaplotig	exon	104070442	104070451	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2725 2716 .
Chr2	stalkie_big_nohaplotig	exon	104081756	104081764	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2741 2733 .
Chr2	stalkie_big_nohaplotig	exon	104087199	104087203	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2746 2742 .
Chr2	stalkie_big_nohaplotig	exon	104087940	104087948	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2755 2747 .
Chr2	stalkie_big_nohaplotig	exon	104094275	104094281	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2768 2762 .
Chr2	stalkie_big_nohaplotig	exon	104097113	104097117	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2773 2769 .
Chr2	stalkie_big_nohaplotig	exon	104104659	104104662	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2777 2774 .
Chr2	stalkie_big_nohaplotig	exon	104112382	104112400	73	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2791 2778 .
Chr2	stalkie_big_nohaplotig	exon	104127628	104127638	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2802 2792 .
Chr2	stalkie_big_nohaplotig	exon	104173130	104173134	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2883 2879 .
Chr2	stalkie_big_nohaplotig	exon	104180190	104180202	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2896 2884 .
Chr2	stalkie_big_nohaplotig	exon	104194057	104194058	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2903 2902 .
Chr2	stalkie_big_nohaplotig	exon	104194587	104194597	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2914 2904 .
Chr2	stalkie_big_nohaplotig	exon	104210392	104210396	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2934 2930 .
Chr2	stalkie_big_nohaplotig	exon	104217135	104217144	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2944 2935 .
Chr2	stalkie_big_nohaplotig	exon	104225659	104225661	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2956 2954 .
Chr2	stalkie_big_nohaplotig	exon	104236822	104236827	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2962 2957 .
Chr2	stalkie_big_nohaplotig	exon	104238928	104238937	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2972 2963 .
Chr2	stalkie_big_nohaplotig	exon	104249996	104250004	66	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2985 2979 .
Chr2	stalkie_big_nohaplotig	exon	104301758	104301763	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2991 2986 .
Chr2	stalkie_big_nohaplotig	exon	104303654	104303661	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3060 3053 .
Chr2	stalkie_big_nohaplotig	exon	104312073	104312082	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3125 3116 .
Chr2	stalkie_big_nohaplotig	exon	104316733	104316749	82	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3154 3140 .
Chr2	stalkie_big_nohaplotig	exon	104318900	104318903	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3158 3155 .
Chr2	stalkie_big_nohaplotig	exon	104319816	104319819	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3165 3162 .
Chr2	stalkie_big_nohaplotig	exon	104321559	104321574	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3181 3166 .
Chr2	stalkie_big_nohaplotig	exon	104328337	104328345	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3191 3183 .
Chr2	stalkie_big_nohaplotig	exon	104328349	104328359	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3207 3197 .
Chr2	stalkie_big_nohaplotig	exon	104341712	104341713	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3210 3209 .
Chr2	stalkie_big_nohaplotig	exon	104342323	104342324	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3212 3211 .
Chr2	stalkie_big_nohaplotig	exon	104344971	104344980	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3222 3213 .
Chr2	stalkie_big_nohaplotig	exon	104345772	104345783	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3235 3224 .
Chr2	stalkie_big_nohaplotig	exon	104356109	104356115	71	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3264 3258 .
Chr2	stalkie_big_nohaplotig	exon	104359864	104359876	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3277 3265 .
Chr2	stalkie_big_nohaplotig	exon	104371220	104371233	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3297 3284 .
Chr2	stalkie_big_nohaplotig	exon	104384643	104384644	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3300 3299 .
Chr2	stalkie_big_nohaplotig	exon	104390520	104390526	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3307 3301 .
Chr2	stalkie_big_nohaplotig	exon	104407767	104407770	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3311 3308 .
Chr2	stalkie_big_nohaplotig	exon	104408616	104408627	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3323 3312 .
Chr2	stalkie_big_nohaplotig	exon	104412610	104412618	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3337 3329 .
Chr2	stalkie_big_nohaplotig	exon	104412662	104412670	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3404 3396 .
Chr2	stalkie_big_nohaplotig	exon	104413997	104414019	57	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3438 3411 .
Chr2	stalkie_big_nohaplotig	exon	104420161	104420172	100	+	.	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 3463 3452 .
Chr2	stalkie_big_nohaplotig	CDS	103703360	103703361	.	+	0	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2089 2088 .
Chr2	stalkie_big_nohaplotig	CDS	103703368	103703515	.	+	1	Parent=comp163684_c3_seq1.mrna1;Target=comp163684_c3_seq1 2252 2105 .
Chr2	stalkie_big_nohaplotig	mRNA	104216292	104217604	.	-	.	ID=comp112400_c0_seq1.mrna1;geneID=comp112400_c0_seq1.path1;Name=comp112400_c0_seq1;Dir=indeterminatecoverage=97.0;identity=99.5;matches=1307;mismatches=6;indels=0;unknowns=0;Target=comp112400_c0_seq1 1354 42 .;CDS_Target=comp112400_c0_seq1 658 503 .;locus=RLOC_00020138
Chr2	stalkie_big_nohaplotig	exon	104216292	104217604	99	-	.	Parent=comp112400_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104216988	104217143	.	-	0	Parent=comp112400_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104344458	104345120	.	+	.	ID=comp104941_c0_seq1.mrna1;geneID=comp104941_c0_seq1.path1;Name=comp104941_c0_seq1;Dir=indeterminatecoverage=92.0;identity=99.8;matches=663;mismatches=0;indels=1;unknowns=0;Target=comp104941_c0_seq1 664 1 .;CDS_Target=comp104941_c0_seq1 476 327 .;locus=RLOC_00020138
Chr2	stalkie_big_nohaplotig	exon	104344458	104345120	99	+	.	Parent=comp104941_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104344783	104344932	.	+	0	Parent=comp104941_c0_seq1.mrna1
Chr2	gffcl	locus	103750878	103751448	.	+	.	ID=RLOC_00020139;geneIDs=comp1437023_c0_seq1.path1;transcripts=comp1437023_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103750878	103751448	.	+	.	ID=comp1437023_c0_seq1.mrna1;geneID=comp1437023_c0_seq1.path1;Name=comp1437023_c0_seq1;Dir=indeterminatecoverage=99.3;identity=100.0;matches=571;mismatches=0;indels=0;unknowns=0;Target=comp1437023_c0_seq1 575 5 .;CDS_Target=comp1437023_c0_seq1 564 373 .;locus=RLOC_00020139
Chr2	stalkie_big_nohaplotig	exon	103750878	103751448	100	+	.	Parent=comp1437023_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103751246	103751437	.	+	0	Parent=comp1437023_c0_seq1.mrna1
Chr2	gffcl	locus	103764074	103765069	.	+	.	ID=RLOC_00020141;geneIDs=ORF1784.path1;transcripts=ORF1784.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103764074	103765069	.	+	.	ID=ORF1784.mrna1;geneID=ORF1784.path1;Name=ORF1784;Dir=indeterminatecoverage=100.0;identity=100.0;matches=996;mismatches=0;indels=0;unknowns=0;Target=ORF1784 996 1 .;locus=RLOC_00020141
Chr2	stalkie_big_nohaplotig	exon	103764074	103765069	100	+	.	Parent=ORF1784.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103764074	103765069	.	+	0	Parent=ORF1784.mrna1
Chr2	gffcl	locus	103765693	103766598	.	+	.	ID=RLOC_00020142;geneIDs=comp152249_c1_seq1.path1;transcripts=comp152249_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103765693	103766598	.	+	.	ID=comp152249_c1_seq1.mrna1;geneID=comp152249_c1_seq1.path1;Name=comp152249_c1_seq1;Dir=indeterminatecoverage=96.0;identity=99.4;matches=903;mismatches=3;indels=2;unknowns=0;Target=comp152249_c1_seq1 909 2 .;CDS_Target=comp152249_c1_seq1 824 678 .;locus=RLOC_00020142
Chr2	stalkie_big_nohaplotig	exon	103765693	103766598	99	+	.	Parent=comp152249_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103766367	103766513	.	+	0	Parent=comp152249_c1_seq1.mrna1
Chr2	gffcl	locus	103766766	103767532	.	+	.	ID=RLOC_00020143;geneIDs=comp158488_c0_seq1.path1;transcripts=comp158488_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103766766	103767532	.	+	.	ID=comp158488_c0_seq1.mrna1;geneID=comp158488_c0_seq1.path1;Name=comp158488_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.6;matches=765;mismatches=2;indels=1;unknowns=0;Target=comp158488_c0_seq1 779 12 .;CDS_Target=comp158488_c0_seq1 607 464 .;locus=RLOC_00020143
Chr2	stalkie_big_nohaplotig	exon	103766766	103767532	99	+	.	Parent=comp158488_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103767218	103767361	.	+	0	Parent=comp158488_c0_seq1.mrna1
Chr2	gffcl	locus	103768087	103768797	.	+	.	ID=RLOC_00020144;geneIDs=comp152424_c0_seq1.path1;transcripts=comp152424_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103768087	103768797	.	+	.	ID=comp152424_c0_seq1.mrna1;geneID=comp152424_c0_seq1.path1;Name=comp152424_c0_seq1;Dir=indeterminatecoverage=97.4;identity=99.0;matches=705;mismatches=6;indels=1;unknowns=0;Target=comp152424_c0_seq1 731 20 .;CDS_Target=comp152424_c0_seq1 354 163 .;locus=RLOC_00020144
Chr2	stalkie_big_nohaplotig	exon	103768087	103768797	99	+	.	Parent=comp152424_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103768230	103768421	.	+	0	Parent=comp152424_c0_seq1.mrna1
Chr2	gffcl	locus	103770880	103771584	.	+	.	ID=RLOC_00020145;geneIDs=comp155083_c0_seq1.path1;transcripts=comp155083_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103770880	103771584	.	+	.	ID=comp155083_c0_seq1.mrna1;geneID=comp155083_c0_seq1.path1;Name=comp155083_c0_seq1;Dir=indeterminatecoverage=97.6;identity=98.6;matches=696;mismatches=9;indels=1;unknowns=0;Target=comp155083_c0_seq1 723 18 .;CDS_Target=comp155083_c0_seq1 677 579 .;locus=RLOC_00020145
Chr2	stalkie_big_nohaplotig	exon	103770880	103771584	98	+	.	Parent=comp155083_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103771440	103771538	.	+	0	Parent=comp155083_c0_seq1.mrna1
Chr2	gffcl	locus	103773915	103774162	.	-	.	ID=RLOC_00020146;geneIDs=comp141802_c0_seq1.path1;transcripts=comp141802_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103773915	103774162	.	-	.	ID=comp141802_c0_seq1.mrna1;geneID=comp141802_c0_seq1.path1;Name=comp141802_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=248;mismatches=0;indels=0;unknowns=0;Target=comp141802_c0_seq1 248 1 .;CDS_Target=comp141802_c0_seq1 119 3 .;locus=RLOC_00020146
Chr2	stalkie_big_nohaplotig	exon	103773915	103774162	100	-	.	Parent=comp141802_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103774044	103774160	.	-	0	Parent=comp141802_c0_seq1.mrna1
Chr2	gffcl	locus	103846669	103847122	.	-	.	ID=RLOC_00020147;geneIDs=comp7042_c1_seq1.path1;transcripts=comp7042_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	103846669	103847122	.	-	.	ID=comp7042_c1_seq1.mrna1;geneID=comp7042_c1_seq1.path1;Name=comp7042_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=454;mismatches=0;indels=0;unknowns=0;Target=comp7042_c1_seq1 454 1 .;CDS_Target=comp7042_c1_seq1 454 272 .;locus=RLOC_00020147
Chr2	stalkie_big_nohaplotig	exon	103846669	103847122	100	-	.	Parent=comp7042_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	103846669	103846851	.	-	0	Parent=comp7042_c1_seq1.mrna1
Chr2	gffcl	locus	103934995	103935587	.	+	.	ID=RLOC_00020148;geneIDs=Dp_FBgn0249362.path10;transcripts=Dp_FBgn0249362.mrna10
Chr2	stalkie_big_nohaplotig	mRNA	103934995	103935587	.	+	.	ID=Dp_FBgn0249362.mrna10;geneID=Dp_FBgn0249362.path10;Name=Dp_FBgn0249362;Dir=indeterminatecoverage=100.0;identity=99.3;matches=590;mismatches=3;indels=1;unknowns=0;Target=Dp_FBgn0249362 594 1 .;locus=RLOC_00020148
Chr2	stalkie_big_nohaplotig	exon	103934995	103935587	99	+	.	Parent=Dp_FBgn0249362.mrna10
Chr2	stalkie_big_nohaplotig	CDS	103934995	103935587	.	+	0	Parent=Dp_FBgn0249362.mrna10
Chr2	gffcl	locus	104090175	104094945	.	+	.	ID=RLOC_00020149;geneIDs=FBgn0037292.1.path1;transcripts=FBgn0037292.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104090175	104094945	.	+	.	ID=FBgn0037292.1.mrna1;geneID=FBgn0037292.1.path1;Name=FBgn0037292.1;Dir=sensecoverage=100.0;identity=99.7;matches=598;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020149
Chr2	stalkie_big_nohaplotig	exon	104090175	104090350	99	+	.	Parent=FBgn0037292.1.mrna1;Target=FBgn0037292.1 1 176 +
Chr2	stalkie_big_nohaplotig	exon	104090528	104090735	100	+	.	Parent=FBgn0037292.1.mrna1;Target=FBgn0037292.1 177 384 +
Chr2	stalkie_big_nohaplotig	exon	104094730	104094945	99	+	.	Parent=FBgn0037292.1.mrna1;Target=FBgn0037292.1 385 600 +
Chr2	stalkie_big_nohaplotig	CDS	104090175	104090350	.	+	0	Parent=FBgn0037292.1.mrna1;Target=FBgn0037292.1 1 176 +
Chr2	stalkie_big_nohaplotig	CDS	104090528	104090735	.	+	1	Parent=FBgn0037292.1.mrna1;Target=FBgn0037292.1 177 384 +
Chr2	stalkie_big_nohaplotig	CDS	104094730	104094945	.	+	0	Parent=FBgn0037292.1.mrna1;Target=FBgn0037292.1 385 600 +
Chr2	gffcl	locus	104095644	104096046	.	-	.	ID=RLOC_00020150;geneIDs=comp130459_c0_seq1.path1;transcripts=comp130459_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104095644	104096046	.	-	.	ID=comp130459_c0_seq1.mrna1;geneID=comp130459_c0_seq1.path1;Name=comp130459_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=400;mismatches=3;indels=0;unknowns=0;Target=comp130459_c0_seq1 403 1 .;CDS_Target=comp130459_c0_seq1 334 215 .;locus=RLOC_00020150
Chr2	stalkie_big_nohaplotig	exon	104095644	104096046	99	-	.	Parent=comp130459_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104095713	104095832	.	-	0	Parent=comp130459_c0_seq1.mrna1
Chr2	gffcl	locus	104140320	104140882	.	-	.	ID=RLOC_00020151;geneIDs=comp153436_c0_seq1.path1;transcripts=comp153436_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104140320	104140882	.	-	.	ID=comp153436_c0_seq1.mrna1;geneID=comp153436_c0_seq1.path1;Name=comp153436_c0_seq1;Dir=indeterminatecoverage=95.6;identity=100.0;matches=563;mismatches=0;indels=0;unknowns=0;Target=comp153436_c0_seq1 569 7 .;CDS_Target=comp153436_c0_seq1 450 7 .;locus=RLOC_00020151
Chr2	stalkie_big_nohaplotig	exon	104140320	104140882	100	-	.	Parent=comp153436_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104140439	104140882	.	-	0	Parent=comp153436_c0_seq1.mrna1
Chr2	gffcl	locus	104153976	104155630	.	+	.	ID=RLOC_00020152;geneIDs=comp159436_c0_seq1.path1;transcripts=comp159436_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104153976	104155630	.	+	.	ID=comp159436_c0_seq1.mrna1;geneID=comp159436_c0_seq1.path1;Name=comp159436_c0_seq1;Dir=indeterminatecoverage=75.1;identity=98.7;matches=1438;mismatches=16;indels=3;unknowns=0;Target=comp159436_c0_seq1 1507 1400 .;locus=RLOC_00020152
Chr2	stalkie_big_nohaplotig	exon	104153976	104154010	94	+	.	Parent=comp159436_c0_seq1.mrna1;Target=comp159436_c0_seq1 35 1 .
Chr2	stalkie_big_nohaplotig	exon	104154204	104155378	98	+	.	Parent=comp159436_c0_seq1.mrna1;Target=comp159436_c0_seq1 1213 36 .
Chr2	stalkie_big_nohaplotig	exon	104155387	104155630	99	+	.	Parent=comp159436_c0_seq1.mrna1;Target=comp159436_c0_seq1 1609 1366 .
Chr2	stalkie_big_nohaplotig	CDS	104155421	104155528	.	+	0	Parent=comp159436_c0_seq1.mrna1
Chr2	gffcl	locus	104155764	104156417	.	-	.	ID=RLOC_00020153;geneIDs=comp135185_c0_seq1.path1;transcripts=comp135185_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104155764	104156417	.	-	.	ID=comp135185_c0_seq1.mrna1;geneID=comp135185_c0_seq1.path1;Name=comp135185_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=585;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020153
Chr2	stalkie_big_nohaplotig	exon	104155764	104156177	99	-	.	Parent=comp135185_c0_seq1.mrna1;Target=comp135185_c0_seq1 173 586 +
Chr2	stalkie_big_nohaplotig	exon	104156246	104156417	100	-	.	Parent=comp135185_c0_seq1.mrna1;Target=comp135185_c0_seq1 1 172 +
Chr2	stalkie_big_nohaplotig	CDS	104155818	104156177	.	-	0	Parent=comp135185_c0_seq1.mrna1;Target=comp135185_c0_seq1 173 532 +
Chr2	stalkie_big_nohaplotig	CDS	104156246	104156323	.	-	0	Parent=comp135185_c0_seq1.mrna1;Target=comp135185_c0_seq1 95 172 +
Chr2	gffcl	locus	104159781	104160493	.	+	.	ID=RLOC_00020154;geneIDs=FBgn0037892.1.path1;transcripts=FBgn0037892.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104159781	104160493	.	+	.	ID=FBgn0037892.1.mrna1;geneID=FBgn0037892.1.path1;Name=FBgn0037892.1;Dir=sensecoverage=100.0;identity=100.0;matches=564;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020154
Chr2	stalkie_big_nohaplotig	exon	104159781	104159812	100	+	.	Parent=FBgn0037892.1.mrna1;Target=FBgn0037892.1 1 32 +
Chr2	stalkie_big_nohaplotig	exon	104159873	104160094	100	+	.	Parent=FBgn0037892.1.mrna1;Target=FBgn0037892.1 33 254 +
Chr2	stalkie_big_nohaplotig	exon	104160184	104160493	100	+	.	Parent=FBgn0037892.1.mrna1;Target=FBgn0037892.1 255 564 +
Chr2	stalkie_big_nohaplotig	CDS	104159781	104159812	.	+	0	Parent=FBgn0037892.1.mrna1;Target=FBgn0037892.1 1 32 +
Chr2	stalkie_big_nohaplotig	CDS	104159873	104160094	.	+	1	Parent=FBgn0037892.1.mrna1;Target=FBgn0037892.1 33 254 +
Chr2	stalkie_big_nohaplotig	CDS	104160184	104160493	.	+	1	Parent=FBgn0037892.1.mrna1;Target=FBgn0037892.1 255 564 +
Chr2	gffcl	locus	104163040	104163741	.	-	.	ID=RLOC_00020155;geneIDs=comp146526_c0_seq1.path1;transcripts=comp146526_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104163040	104163741	.	-	.	ID=comp146526_c0_seq1.mrna1;geneID=comp146526_c0_seq1.path1;Name=comp146526_c0_seq1;Dir=antisensecoverage=97.9;identity=100.0;matches=642;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020155
Chr2	stalkie_big_nohaplotig	exon	104163040	104163480	100	-	.	Parent=comp146526_c0_seq1.mrna1;Target=comp146526_c0_seq1 1 441 -
Chr2	stalkie_big_nohaplotig	exon	104163541	104163741	100	-	.	Parent=comp146526_c0_seq1.mrna1;Target=comp146526_c0_seq1 442 642 -
Chr2	stalkie_big_nohaplotig	CDS	104163141	104163480	.	-	1	Parent=comp146526_c0_seq1.mrna1;Target=comp146526_c0_seq1 102 441 .
Chr2	stalkie_big_nohaplotig	CDS	104163541	104163653	.	-	0	Parent=comp146526_c0_seq1.mrna1;Target=comp146526_c0_seq1 442 554 .
Chr2	gffcl	locus	104165622	104166214	.	-	.	ID=RLOC_00020156;geneIDs=comp148260_c2_seq1.path1;transcripts=comp148260_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104165622	104166214	.	-	.	ID=comp148260_c2_seq1.mrna1;geneID=comp148260_c2_seq1.path1;Name=comp148260_c2_seq1;Dir=indeterminatecoverage=97.7;identity=89.8;matches=583;mismatches=10;indels=56;unknowns=0;Target=comp148260_c2_seq1 649 1 .;CDS_Target=comp148260_c2_seq1 34 2 .;locus=RLOC_00020156
Chr2	stalkie_big_nohaplotig	exon	104165622	104166214	89	-	.	Parent=comp148260_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104166181	104166213	.	-	0	Parent=comp148260_c2_seq1.mrna1
Chr2	gffcl	locus	104169748	104170217	.	+	.	ID=RLOC_00020157;geneIDs=comp162767_c0_seq1.path2;transcripts=comp162767_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	104169748	104170217	.	+	.	ID=comp162767_c0_seq1.mrna2;geneID=comp162767_c0_seq1.path2;Name=comp162767_c0_seq1;Dir=indeterminatecoverage=31.0;identity=97.7;matches=461;mismatches=9;indels=2;unknowns=0;Target=comp162767_c0_seq1 1525 1054 .;CDS_Target=comp162767_c0_seq1 1223 1054 .;locus=RLOC_00020157
Chr2	stalkie_big_nohaplotig	exon	104169748	104170217	97	+	.	Parent=comp162767_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	104169748	104169917	.	+	1	Parent=comp162767_c0_seq1.mrna2
Chr2	gffcl	locus	104175608	104176849	.	.	.	ID=RLOC_00020158;geneIDs=comp111675_c0_seq1.path1,comp111675_c0_seq1.path2,comp145197_c0_seq1.path1;transcripts=comp145197_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104175897	104176849	.	-	.	ID=comp145197_c0_seq1.mrna1;geneID=comp145197_c0_seq1.path1;Name=comp145197_c0_seq1;Dir=indeterminatecoverage=97.1;identity=98.2;matches=938;mismatches=15;indels=2;unknowns=0;Target=comp145197_c0_seq1 984 30 .;CDS_Target=comp145197_c0_seq1 86 30 .;locus=RLOC_00020158
Chr2	stalkie_big_nohaplotig	exon	104175897	104176849	98	-	.	Parent=comp145197_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104176793	104176849	.	-	0	Parent=comp145197_c0_seq1.mrna1
Chr2	gffcl	locus	104180881	104181291	.	+	.	ID=RLOC_00020159;geneIDs=comp139349_c0_seq1.path1;transcripts=comp139349_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104180881	104181291	.	+	.	ID=comp139349_c0_seq1.mrna1;geneID=comp139349_c0_seq1.path1;Name=comp139349_c0_seq1;Dir=indeterminatecoverage=91.3;identity=100.0;matches=411;mismatches=0;indels=0;unknowns=0;Target=comp139349_c0_seq1 449 39 .;CDS_Target=comp139349_c0_seq1 320 252 .;locus=RLOC_00020159
Chr2	stalkie_big_nohaplotig	exon	104180881	104181291	100	+	.	Parent=comp139349_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104181094	104181162	.	+	0	Parent=comp139349_c0_seq1.mrna1
Chr2	gffcl	locus	104204208	104321493	.	-	.	ID=RLOC_00020160;geneIDs=FBgn0000504.1.path1;transcripts=FBgn0000504.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104204208	104321493	.	-	.	ID=FBgn0000504.1.mrna1;geneID=FBgn0000504.1.path1;Name=FBgn0000504.1;Dir=sensecoverage=100.0;identity=100.0;matches=1143;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020160
Chr2	stalkie_big_nohaplotig	exon	104204208	104204515	100	-	.	Parent=FBgn0000504.1.mrna1;Target=FBgn0000504.1 836 1143 +
Chr2	stalkie_big_nohaplotig	exon	104224410	104224547	100	-	.	Parent=FBgn0000504.1.mrna1;Target=FBgn0000504.1 698 835 +
Chr2	stalkie_big_nohaplotig	exon	104320797	104321493	100	-	.	Parent=FBgn0000504.1.mrna1;Target=FBgn0000504.1 1 697 +
Chr2	stalkie_big_nohaplotig	CDS	104204208	104204515	.	-	2	Parent=FBgn0000504.1.mrna1;Target=FBgn0000504.1 836 1143 +
Chr2	stalkie_big_nohaplotig	CDS	104224410	104224547	.	-	2	Parent=FBgn0000504.1.mrna1;Target=FBgn0000504.1 698 835 +
Chr2	stalkie_big_nohaplotig	CDS	104320797	104321493	.	-	0	Parent=FBgn0000504.1.mrna1;Target=FBgn0000504.1 1 697 +
Chr2	gffcl	locus	104204741	104206278	.	-	.	ID=RLOC_00020161;geneIDs=comp146675_c0_seq1.path1;transcripts=comp146675_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104204741	104206278	.	-	.	ID=comp146675_c0_seq1.mrna1;geneID=comp146675_c0_seq1.path1;Name=comp146675_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1535;mismatches=3;indels=0;unknowns=0;Target=comp146675_c0_seq1 1538 1 .;CDS_Target=comp146675_c0_seq1 1233 1090 .;locus=RLOC_00020161
Chr2	stalkie_big_nohaplotig	exon	104204741	104206278	99	-	.	Parent=comp146675_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104205046	104205189	.	-	0	Parent=comp146675_c0_seq1.mrna1
Chr2	gffcl	locus	104209001	104209457	.	+	.	ID=RLOC_00020162;geneIDs=comp158132_c0_seq1.path1;transcripts=comp158132_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104209001	104209457	.	+	.	ID=comp158132_c0_seq1.mrna1;geneID=comp158132_c0_seq1.path1;Name=comp158132_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=454;mismatches=3;indels=1;unknowns=0;Target=comp158132_c0_seq1 458 1 .;CDS_Target=comp158132_c0_seq1 248 3 .;locus=RLOC_00020162
Chr2	stalkie_big_nohaplotig	exon	104209001	104209457	99	+	.	Parent=comp158132_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104209003	104209247	.	+	0	Parent=comp158132_c0_seq1.mrna1
Chr2	gffcl	locus	104209564	104209864	.	+	.	ID=RLOC_00020163;geneIDs=comp1724508_c0_seq1.path1;transcripts=comp1724508_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104209564	104209864	.	+	.	ID=comp1724508_c0_seq1.mrna1;geneID=comp1724508_c0_seq1.path1;Name=comp1724508_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=297;mismatches=4;indels=0;unknowns=0;Target=comp1724508_c0_seq1 301 1 .;CDS_Target=comp1724508_c0_seq1 265 134 .;locus=RLOC_00020163
Chr2	stalkie_big_nohaplotig	exon	104209564	104209864	98	+	.	Parent=comp1724508_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104209697	104209828	.	+	0	Parent=comp1724508_c0_seq1.mrna1
Chr2	gffcl	locus	104214596	104215298	.	-	.	ID=RLOC_00020164;geneIDs=comp144175_c0_seq1.path1;transcripts=comp144175_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104214596	104215298	.	-	.	ID=comp144175_c0_seq1.mrna1;geneID=comp144175_c0_seq1.path1;Name=comp144175_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=703;mismatches=0;indels=2;unknowns=0;Target=comp144175_c0_seq1 705 1 .;CDS_Target=comp144175_c0_seq1 460 269 .;locus=RLOC_00020164
Chr2	stalkie_big_nohaplotig	exon	104214596	104215298	99	-	.	Parent=comp144175_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104214841	104215031	.	-	0	Parent=comp144175_c0_seq1.mrna1
Chr2	gffcl	locus	104220145	104220689	.	+	.	ID=RLOC_00020165;geneIDs=comp119011_c0_seq1.path1;transcripts=comp119011_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104220145	104220689	.	+	.	ID=comp119011_c0_seq1.mrna1;geneID=comp119011_c0_seq1.path1;Name=comp119011_c0_seq1;Dir=indeterminatecoverage=95.1;identity=99.3;matches=541;mismatches=4;indels=0;unknowns=0;Target=comp119011_c0_seq1 573 29 .;CDS_Target=comp119011_c0_seq1 571 503 .;locus=RLOC_00020165
Chr2	stalkie_big_nohaplotig	exon	104220145	104220689	99	+	.	Parent=comp119011_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104220619	104220687	.	+	0	Parent=comp119011_c0_seq1.mrna1
Chr2	gffcl	locus	104221228	104222238	.	-	.	ID=RLOC_00020166;geneIDs=comp151634_c0_seq1.path1;transcripts=comp151634_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104221228	104222238	.	-	.	ID=comp151634_c0_seq1.mrna1;geneID=comp151634_c0_seq1.path1;Name=comp151634_c0_seq1;Dir=indeterminatecoverage=86.3;identity=99.9;matches=1010;mismatches=1;indels=0;unknowns=0;Target=comp151634_c0_seq1 1172 162 .;CDS_Target=comp151634_c0_seq1 428 291 .;locus=RLOC_00020166
Chr2	stalkie_big_nohaplotig	exon	104221228	104222238	99	-	.	Parent=comp151634_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104221972	104222109	.	-	0	Parent=comp151634_c0_seq1.mrna1
Chr2	gffcl	locus	104222298	104223243	.	-	.	ID=RLOC_00020167;geneIDs=comp152322_c0_seq1.path1;transcripts=comp152322_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104222298	104223243	.	-	.	ID=comp152322_c0_seq1.mrna1;geneID=comp152322_c0_seq1.path1;Name=comp152322_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=945;mismatches=1;indels=0;unknowns=0;Target=comp152322_c0_seq1 946 1 .;CDS_Target=comp152322_c0_seq1 443 237 .;locus=RLOC_00020167
Chr2	stalkie_big_nohaplotig	exon	104222298	104223243	99	-	.	Parent=comp152322_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104222801	104223007	.	-	0	Parent=comp152322_c0_seq1.mrna1
Chr2	gffcl	locus	104223530	104223893	.	+	.	ID=RLOC_00020168;geneIDs=comp146189_c0_seq1.path1;transcripts=comp146189_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104223530	104223893	.	+	.	ID=comp146189_c0_seq1.mrna1;geneID=comp146189_c0_seq1.path1;Name=comp146189_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=364;mismatches=0;indels=0;unknowns=0;Target=comp146189_c0_seq1 364 1 .;CDS_Target=comp146189_c0_seq1 198 121 .;locus=RLOC_00020168
Chr2	stalkie_big_nohaplotig	exon	104223530	104223893	100	+	.	Parent=comp146189_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104223650	104223727	.	+	0	Parent=comp146189_c0_seq1.mrna1
Chr2	gffcl	locus	104237242	104238282	.	+	.	ID=RLOC_00020169;geneIDs=comp162003_c0_seq1.path1;transcripts=comp162003_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104237242	104238282	.	+	.	ID=comp162003_c0_seq1.mrna1;geneID=comp162003_c0_seq1.path1;Name=comp162003_c0_seq1;Dir=antisensecoverage=90.8;identity=99.5;matches=982;mismatches=4;indels=1;unknowns=0;Target=comp162003_c0_seq1 520 627 .;locus=RLOC_00020169
Chr2	stalkie_big_nohaplotig	exon	104237242	104237396	100	+	.	Parent=comp162003_c0_seq1.mrna1;Target=comp162003_c0_seq1 833 987 -
Chr2	stalkie_big_nohaplotig	exon	104237452	104238282	99	+	.	Parent=comp162003_c0_seq1.mrna1;Target=comp162003_c0_seq1 1 832 -
Chr2	stalkie_big_nohaplotig	CDS	104237657	104237764	.	+	0	Parent=comp162003_c0_seq1.mrna1
Chr2	gffcl	locus	104322053	104348968	.	-	.	ID=RLOC_00020170;geneIDs=comp143126_c0_seq1.path1;transcripts=comp143126_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104322053	104348968	.	-	.	ID=comp143126_c0_seq1.mrna1;geneID=comp143126_c0_seq1.path1;Name=comp143126_c0_seq1;Dir=sensecoverage=99.7;identity=100.0;matches=367;mismatches=0;indels=0;unknowns=0;Target=comp143126_c0_seq1 31 72 +;locus=RLOC_00020170
Chr2	stalkie_big_nohaplotig	exon	104322053	104322173	100	-	.	Parent=comp143126_c0_seq1.mrna1;Target=comp143126_c0_seq1 247 367 +
Chr2	stalkie_big_nohaplotig	exon	104348723	104348968	100	-	.	Parent=comp143126_c0_seq1.mrna1;Target=comp143126_c0_seq1 1 246 +
Chr2	stalkie_big_nohaplotig	CDS	104348897	104348938	.	-	0	Parent=comp143126_c0_seq1.mrna1
Chr2	gffcl	locus	104374317	104374757	.	-	.	ID=RLOC_00020171;geneIDs=FBgn0259982.1.path1;transcripts=FBgn0259982.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104374317	104374757	.	-	.	ID=FBgn0259982.1.mrna1;geneID=FBgn0259982.1.path1;Name=FBgn0259982.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=439;mismatches=2;indels=0;unknowns=0;Target=FBgn0259982.1 441 1 .;locus=RLOC_00020171
Chr2	stalkie_big_nohaplotig	exon	104374317	104374757	99	-	.	Parent=FBgn0259982.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104374317	104374757	.	-	0	Parent=FBgn0259982.1.mrna1
Chr2	gffcl	locus	104378826	104382164	.	+	.	ID=RLOC_00020172;geneIDs=FBgn0032467.2.path1;transcripts=FBgn0032467.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104378826	104382164	.	+	.	ID=FBgn0032467.2.mrna1;geneID=FBgn0032467.2.path1;Name=FBgn0032467.2;Dir=indeterminatecoverage=100.0;identity=99.9;matches=3334;mismatches=5;indels=0;unknowns=0;Target=FBgn0032467.2 3339 1 .;locus=RLOC_00020172
Chr2	stalkie_big_nohaplotig	exon	104378826	104382164	99	+	.	Parent=FBgn0032467.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104378826	104382164	.	+	0	Parent=FBgn0032467.2.mrna1
Chr2	gffcl	locus	104384830	104385609	.	-	.	ID=RLOC_00020173;geneIDs=FBgn0037893.1.path1;transcripts=FBgn0037893.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104384830	104385609	.	-	.	ID=FBgn0037893.1.mrna1;geneID=FBgn0037893.1.path1;Name=FBgn0037893.1;Dir=sensecoverage=100.0;identity=100.0;matches=606;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020173
Chr2	stalkie_big_nohaplotig	exon	104384830	104384935	100	-	.	Parent=FBgn0037893.1.mrna1;Target=FBgn0037893.1 501 606 +
Chr2	stalkie_big_nohaplotig	exon	104385005	104385402	100	-	.	Parent=FBgn0037893.1.mrna1;Target=FBgn0037893.1 103 500 +
Chr2	stalkie_big_nohaplotig	exon	104385508	104385609	100	-	.	Parent=FBgn0037893.1.mrna1;Target=FBgn0037893.1 1 102 +
Chr2	stalkie_big_nohaplotig	CDS	104384830	104384935	.	-	1	Parent=FBgn0037893.1.mrna1;Target=FBgn0037893.1 501 606 +
Chr2	stalkie_big_nohaplotig	CDS	104385005	104385402	.	-	0	Parent=FBgn0037893.1.mrna1;Target=FBgn0037893.1 103 500 +
Chr2	stalkie_big_nohaplotig	CDS	104385508	104385609	.	-	0	Parent=FBgn0037893.1.mrna1;Target=FBgn0037893.1 1 102 +
Chr2	gffcl	locus	104387621	104393156	.	+	.	ID=RLOC_00020174;geneIDs=FBgn0002542.1.path1;transcripts=FBgn0002542.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104387621	104393156	.	+	.	ID=FBgn0002542.1.mrna1;geneID=FBgn0002542.1.path1;Name=FBgn0002542.1;Dir=sensecoverage=100.0;identity=99.8;matches=3246;mismatches=6;indels=0;unknowns=0;locus=RLOC_00020174
Chr2	stalkie_big_nohaplotig	exon	104387621	104387645	100	+	.	Parent=FBgn0002542.1.mrna1;Target=FBgn0002542.1 1 25 +
Chr2	stalkie_big_nohaplotig	exon	104387707	104387766	100	+	.	Parent=FBgn0002542.1.mrna1;Target=FBgn0002542.1 26 85 +
Chr2	stalkie_big_nohaplotig	exon	104387850	104388203	100	+	.	Parent=FBgn0002542.1.mrna1;Target=FBgn0002542.1 86 439 +
Chr2	stalkie_big_nohaplotig	exon	104388251	104388409	100	+	.	Parent=FBgn0002542.1.mrna1;Target=FBgn0002542.1 440 598 +
Chr2	stalkie_big_nohaplotig	exon	104388481	104389232	100	+	.	Parent=FBgn0002542.1.mrna1;Target=FBgn0002542.1 599 1350 +
Chr2	stalkie_big_nohaplotig	exon	104391140	104391446	99	+	.	Parent=FBgn0002542.1.mrna1;Target=FBgn0002542.1 1351 1657 +
Chr2	stalkie_big_nohaplotig	exon	104391503	104392359	99	+	.	Parent=FBgn0002542.1.mrna1;Target=FBgn0002542.1 1658 2514 +
Chr2	stalkie_big_nohaplotig	exon	104392419	104393156	99	+	.	Parent=FBgn0002542.1.mrna1;Target=FBgn0002542.1 2515 3252 +
Chr2	stalkie_big_nohaplotig	CDS	104387621	104387645	.	+	0	Parent=FBgn0002542.1.mrna1;Target=FBgn0002542.1 1 25 +
Chr2	stalkie_big_nohaplotig	CDS	104387707	104387766	.	+	2	Parent=FBgn0002542.1.mrna1;Target=FBgn0002542.1 26 85 +
Chr2	stalkie_big_nohaplotig	CDS	104387850	104388203	.	+	2	Parent=FBgn0002542.1.mrna1;Target=FBgn0002542.1 86 439 +
Chr2	stalkie_big_nohaplotig	CDS	104388251	104388409	.	+	2	Parent=FBgn0002542.1.mrna1;Target=FBgn0002542.1 440 598 +
Chr2	stalkie_big_nohaplotig	CDS	104388481	104389232	.	+	2	Parent=FBgn0002542.1.mrna1;Target=FBgn0002542.1 599 1350 +
Chr2	stalkie_big_nohaplotig	CDS	104391140	104391446	.	+	0	Parent=FBgn0002542.1.mrna1;Target=FBgn0002542.1 1351 1657 +
Chr2	stalkie_big_nohaplotig	CDS	104391503	104392359	.	+	2	Parent=FBgn0002542.1.mrna1;Target=FBgn0002542.1 1658 2514 +
Chr2	stalkie_big_nohaplotig	CDS	104392419	104393156	.	+	0	Parent=FBgn0002542.1.mrna1;Target=FBgn0002542.1 2515 3252 +
Chr2	gffcl	locus	104396563	104396817	.	-	.	ID=RLOC_00020175;geneIDs=comp758003_c0_seq1.path1;transcripts=comp758003_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104396563	104396817	.	-	.	ID=comp758003_c0_seq1.mrna1;geneID=comp758003_c0_seq1.path1;Name=comp758003_c0_seq1;Dir=indeterminatecoverage=97.3;identity=99.6;matches=254;mismatches=1;indels=0;unknowns=0;Target=comp758003_c0_seq1 262 8 .;CDS_Target=comp758003_c0_seq1 79 8 .;locus=RLOC_00020175
Chr2	stalkie_big_nohaplotig	exon	104396563	104396817	99	-	.	Parent=comp758003_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104396746	104396817	.	-	0	Parent=comp758003_c0_seq1.mrna1
Chr2	gffcl	locus	104396858	104398506	.	-	.	ID=RLOC_00020176;geneIDs=comp156099_c0_seq1.path1;transcripts=comp156099_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104396858	104398506	.	-	.	ID=comp156099_c0_seq1.mrna1;geneID=comp156099_c0_seq1.path1;Name=comp156099_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.0;matches=1638;mismatches=11;indels=6;unknowns=0;Target=comp156099_c0_seq1 1670 16 .;CDS_Target=comp156099_c0_seq1 320 183 .;locus=RLOC_00020176
Chr2	stalkie_big_nohaplotig	exon	104396858	104398506	98	-	.	Parent=comp156099_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104398205	104398342	.	-	0	Parent=comp156099_c0_seq1.mrna1
Chr2	gffcl	locus	104400451	104401199	.	-	.	ID=RLOC_00020177;geneIDs=comp112399_c0_seq1.path1;transcripts=comp112399_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104400451	104401199	.	-	.	ID=comp112399_c0_seq1.mrna1;geneID=comp112399_c0_seq1.path1;Name=comp112399_c0_seq1;Dir=indeterminatecoverage=94.5;identity=98.3;matches=736;mismatches=13;indels=0;unknowns=0;Target=comp112399_c0_seq1 793 45 .;CDS_Target=comp112399_c0_seq1 562 512 .;locus=RLOC_00020177
Chr2	stalkie_big_nohaplotig	exon	104400451	104401199	98	-	.	Parent=comp112399_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104400682	104400732	.	-	0	Parent=comp112399_c0_seq1.mrna1
Chr2	gffcl	locus	104406342	104406955	.	+	.	ID=RLOC_00020178;geneIDs=comp135793_c0_seq1.path1;transcripts=comp135793_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104406342	104406955	.	+	.	ID=comp135793_c0_seq1.mrna1;geneID=comp135793_c0_seq1.path1;Name=comp135793_c0_seq1;Dir=indeterminatecoverage=97.2;identity=100.0;matches=614;mismatches=0;indels=0;unknowns=0;Target=comp135793_c0_seq1 632 19 .;CDS_Target=comp135793_c0_seq1 242 111 .;locus=RLOC_00020178
Chr2	stalkie_big_nohaplotig	exon	104406342	104406955	100	+	.	Parent=comp135793_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104406434	104406565	.	+	0	Parent=comp135793_c0_seq1.mrna1
Chr2	gffcl	locus	104418743	104446897	.	-	.	ID=RLOC_00020179;geneIDs=FBgn0004595.path1,comp157658_c1_seq1.path1;transcripts=comp157658_c1_seq1.mrna1,FBgn0004595.mrna1,FBgn0004595.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104418743	104442856	.	-	.	ID=comp157658_c1_seq1.mrna1;geneID=comp157658_c1_seq1.path1;Name=comp157658_c1_seq1;Dir=antisensecoverage=90.5;identity=99.5;matches=1909;mismatches=4;indels=6;unknowns=0;locus=RLOC_00020179
Chr2	stalkie_big_nohaplotig	exon	104418743	104418769	89	-	.	Parent=comp157658_c1_seq1.mrna1;Target=comp157658_c1_seq1 203 231 -
Chr2	stalkie_big_nohaplotig	exon	104420434	104420436	100	-	.	Parent=comp157658_c1_seq1.mrna1;Target=comp157658_c1_seq1 232 234 -
Chr2	stalkie_big_nohaplotig	exon	104422233	104422240	100	-	.	Parent=comp157658_c1_seq1.mrna1;Target=comp157658_c1_seq1 235 242 -
Chr2	stalkie_big_nohaplotig	exon	104422905	104422915	90	-	.	Parent=comp157658_c1_seq1.mrna1;Target=comp157658_c1_seq1 243 253 -
Chr2	stalkie_big_nohaplotig	exon	104426490	104426501	91	-	.	Parent=comp157658_c1_seq1.mrna1;Target=comp157658_c1_seq1 254 265 -
Chr2	stalkie_big_nohaplotig	exon	104427372	104427378	100	-	.	Parent=comp157658_c1_seq1.mrna1;Target=comp157658_c1_seq1 266 272 -
Chr2	stalkie_big_nohaplotig	exon	104427452	104428114	99	-	.	Parent=comp157658_c1_seq1.mrna1;Target=comp157658_c1_seq1 273 936 -
Chr2	stalkie_big_nohaplotig	exon	104428788	104428932	100	-	.	Parent=comp157658_c1_seq1.mrna1;Target=comp157658_c1_seq1 937 1081 -
Chr2	stalkie_big_nohaplotig	exon	104440600	104440782	100	-	.	Parent=comp157658_c1_seq1.mrna1;Target=comp157658_c1_seq1 1082 1264 -
Chr2	stalkie_big_nohaplotig	exon	104442003	104442856	99	-	.	Parent=comp157658_c1_seq1.mrna1;Target=comp157658_c1_seq1 1265 2121 -
Chr2	stalkie_big_nohaplotig	CDS	104427935	104428114	.	-	0	Parent=comp157658_c1_seq1.mrna1;Target=comp157658_c1_seq1 757 936 .
Chr2	stalkie_big_nohaplotig	CDS	104428788	104428932	.	-	1	Parent=comp157658_c1_seq1.mrna1;Target=comp157658_c1_seq1 937 1081 .
Chr2	stalkie_big_nohaplotig	CDS	104440600	104440782	.	-	1	Parent=comp157658_c1_seq1.mrna1;Target=comp157658_c1_seq1 1082 1264 .
Chr2	stalkie_big_nohaplotig	CDS	104442003	104442856	.	-	0	Parent=comp157658_c1_seq1.mrna1;Target=comp157658_c1_seq1 1265 2121 .
Chr2	stalkie_big_nohaplotig	mRNA	104427938	104442856	.	-	.	ID=FBgn0004595.mrna1;geneID=FBgn0004595.path1;Name=FBgn0004595;Dir=sensecoverage=100.0;identity=99.7;matches=1358;mismatches=1;indels=3;unknowns=0;locus=RLOC_00020179
Chr2	stalkie_big_nohaplotig	exon	104427938	104442856	.	-	.	Parent=FBgn0004595.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104427938	104446897	.	-	.	ID=FBgn0004595.mrna1;geneID=FBgn0004595.path1;Name=FBgn0004595;Dir=sensecoverage=100.0;identity=100.0;matches=708;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020179
Chr2	stalkie_big_nohaplotig	exon	104427938	104428114	100	-	.	Parent=FBgn0004595.mrna1;Target=FBgn0004595 1186 1362 +
Chr2	stalkie_big_nohaplotig	exon	104428788	104428932	100	-	.	Parent=FBgn0004595.mrna1;Target=FBgn0004595 1041 1185 +
Chr2	stalkie_big_nohaplotig	exon	104440600	104440782	100	-	.	Parent=FBgn0004595.mrna1;Target=FBgn0004595 858 1040 +
Chr2	stalkie_big_nohaplotig	exon	104442003	104442856	99	-	.	Parent=FBgn0004595.mrna1;Target=FBgn0004595 1 857 +
Chr2	stalkie_big_nohaplotig	exon	104442884	104443026	100	-	.	Parent=FBgn0004595.mrna1;Target=FBgn0004595 566 708 +
Chr2	stalkie_big_nohaplotig	exon	104443567	104444131	100	-	.	Parent=FBgn0004595.mrna1;Target=FBgn0004595 1 565 +
Chr2	stalkie_big_nohaplotig	exon	104444234	104446897	99	-	.	Parent=FBgn0004595.mrna1;Target=FBgn0004595 2658 1 .
Chr2	stalkie_big_nohaplotig	CDS	104427938	104428114	.	-	0	Parent=FBgn0004595.mrna1;Target=FBgn0004595 1186 1362 +
Chr2	stalkie_big_nohaplotig	CDS	104428788	104428932	.	-	1	Parent=FBgn0004595.mrna1;Target=FBgn0004595 1041 1185 +
Chr2	stalkie_big_nohaplotig	CDS	104440600	104440782	.	-	1	Parent=FBgn0004595.mrna1;Target=FBgn0004595 858 1040 +
Chr2	stalkie_big_nohaplotig	CDS	104442003	104442856	.	-	0	Parent=FBgn0004595.mrna1;Target=FBgn0004595 1 857 +
Chr2	stalkie_big_nohaplotig	CDS	104442884	104443026	.	-	2	Parent=FBgn0004595.mrna1;Target=FBgn0004595 566 708 +
Chr2	stalkie_big_nohaplotig	CDS	104443567	104444131	.	-	0	Parent=FBgn0004595.mrna1;Target=FBgn0004595 1 565 +
Chr2	stalkie_big_nohaplotig	CDS	104444234	104446897	.	-	0	Parent=FBgn0004595.mrna1;Target=FBgn0004595 2658 1 .
Chr2	gffcl	locus	104421029	104421467	.	+	.	ID=RLOC_00020180;geneIDs=comp138584_c1_seq1.path1;transcripts=comp138584_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104421029	104421467	.	+	.	ID=comp138584_c1_seq1.mrna1;geneID=comp138584_c1_seq1.path1;Name=comp138584_c1_seq1;Dir=indeterminatecoverage=97.3;identity=99.5;matches=437;mismatches=1;indels=1;unknowns=0;Target=comp138584_c1_seq1 450 13 .;CDS_Target=comp138584_c1_seq1 421 242 .;locus=RLOC_00020180
Chr2	stalkie_big_nohaplotig	exon	104421029	104421467	99	+	.	Parent=comp138584_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104421258	104421437	.	+	0	Parent=comp138584_c1_seq1.mrna1
Chr2	gffcl	locus	104426895	104427270	.	-	.	ID=RLOC_00020181;geneIDs=comp146546_c0_seq1.path1;transcripts=comp146546_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104426895	104427270	.	-	.	ID=comp146546_c0_seq1.mrna1;geneID=comp146546_c0_seq1.path1;Name=comp146546_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.7;matches=375;mismatches=1;indels=0;unknowns=0;Target=comp146546_c0_seq1 379 4 .;CDS_Target=comp146546_c0_seq1 35 6 .;locus=RLOC_00020181
Chr2	stalkie_big_nohaplotig	exon	104426895	104427270	99	-	.	Parent=comp146546_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104427239	104427268	.	-	0	Parent=comp146546_c0_seq1.mrna1
Chr2	gffcl	locus	104447200	104451175	.	-	.	ID=RLOC_00020182;geneIDs=comp156884_c0_seq1.path1;transcripts=comp156884_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104447200	104451175	.	-	.	ID=comp156884_c0_seq1.mrna1;geneID=comp156884_c0_seq1.path1;Name=comp156884_c0_seq1;Dir=antisensecoverage=86.7;identity=99.1;matches=1437;mismatches=4;indels=9;unknowns=0;Target=comp156884_c0_seq1 1088 1222 .;locus=RLOC_00020182
Chr2	stalkie_big_nohaplotig	exon	104447200	104448603	99	-	.	Parent=comp156884_c0_seq1.mrna1;Target=comp156884_c0_seq1 26 1422 -
Chr2	stalkie_big_nohaplotig	exon	104451131	104451175	100	-	.	Parent=comp156884_c0_seq1.mrna1;Target=comp156884_c0_seq1 1423 1467 -
Chr2	stalkie_big_nohaplotig	CDS	104448269	104448403	.	-	0	Parent=comp156884_c0_seq1.mrna1
Chr2	gffcl	locus	104493055	104494173	.	-	.	ID=RLOC_00020183;geneIDs=FBgn0053310.path1;transcripts=FBgn0053310.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104493055	104494173	.	-	.	ID=FBgn0053310.mrna1;geneID=FBgn0053310.path1;Name=FBgn0053310;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1118;mismatches=1;indels=0;unknowns=0;Target=FBgn0053310 1119 1 .;locus=RLOC_00020183
Chr2	stalkie_big_nohaplotig	exon	104493055	104494173	99	-	.	Parent=FBgn0053310.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104493055	104494173	.	-	0	Parent=FBgn0053310.mrna1
Chr2	gffcl	locus	104692423	104693206	.	+	.	ID=RLOC_00020184;geneIDs=FBgn0051278.1.path1;transcripts=FBgn0051278.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104692423	104693206	.	+	.	ID=FBgn0051278.1.mrna1;geneID=FBgn0051278.1.path1;Name=FBgn0051278.1;Dir=sensecoverage=100.0;identity=100.0;matches=726;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020184
Chr2	stalkie_big_nohaplotig	exon	104692423	104692839	100	+	.	Parent=FBgn0051278.1.mrna1;Target=FBgn0051278.1 1 417 +
Chr2	stalkie_big_nohaplotig	exon	104692898	104693206	100	+	.	Parent=FBgn0051278.1.mrna1;Target=FBgn0051278.1 418 726 +
Chr2	stalkie_big_nohaplotig	CDS	104692423	104692839	.	+	0	Parent=FBgn0051278.1.mrna1;Target=FBgn0051278.1 1 417 +
Chr2	stalkie_big_nohaplotig	CDS	104692898	104693206	.	+	0	Parent=FBgn0051278.1.mrna1;Target=FBgn0051278.1 418 726 +
Chr2	gffcl	locus	104702844	104723851	.	+	.	ID=RLOC_00020185;geneIDs=FBgn0038247.1.path1;transcripts=FBgn0038247.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104702844	104723851	.	+	.	ID=FBgn0038247.1.mrna1;geneID=FBgn0038247.1.path1;Name=FBgn0038247.1;Dir=sensecoverage=100.0;identity=99.8;matches=5045;mismatches=10;indels=0;unknowns=0;locus=RLOC_00020185
Chr2	stalkie_big_nohaplotig	exon	104702844	104702916	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 1 73 +
Chr2	stalkie_big_nohaplotig	exon	104704016	104704147	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 74 205 +
Chr2	stalkie_big_nohaplotig	exon	104704201	104704285	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 206 290 +
Chr2	stalkie_big_nohaplotig	exon	104705136	104705316	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 291 471 +
Chr2	stalkie_big_nohaplotig	exon	104705451	104705620	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 472 641 +
Chr2	stalkie_big_nohaplotig	exon	104705848	104706028	99	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 642 822 +
Chr2	stalkie_big_nohaplotig	exon	104706175	104706253	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 823 901 +
Chr2	stalkie_big_nohaplotig	exon	104706317	104706411	98	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 902 996 +
Chr2	stalkie_big_nohaplotig	exon	104706539	104706718	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 997 1176 +
Chr2	stalkie_big_nohaplotig	exon	104707602	104707775	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 1177 1350 +
Chr2	stalkie_big_nohaplotig	exon	104708202	104708395	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 1351 1544 +
Chr2	stalkie_big_nohaplotig	exon	104708454	104708682	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 1545 1773 +
Chr2	stalkie_big_nohaplotig	exon	104708880	104709049	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 1774 1943 +
Chr2	stalkie_big_nohaplotig	exon	104709115	104709281	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 1944 2110 +
Chr2	stalkie_big_nohaplotig	exon	104710333	104710446	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 2111 2224 +
Chr2	stalkie_big_nohaplotig	exon	104710512	104710572	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 2225 2285 +
Chr2	stalkie_big_nohaplotig	exon	104710703	104710859	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 2286 2442 +
Chr2	stalkie_big_nohaplotig	exon	104711187	104711322	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 2443 2578 +
Chr2	stalkie_big_nohaplotig	exon	104712240	104712440	99	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 2579 2779 +
Chr2	stalkie_big_nohaplotig	exon	104712494	104712609	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 2780 2895 +
Chr2	stalkie_big_nohaplotig	exon	104714717	104714813	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 2896 2992 +
Chr2	stalkie_big_nohaplotig	exon	104714956	104715211	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 2993 3248 +
Chr2	stalkie_big_nohaplotig	exon	104715333	104715460	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 3249 3376 +
Chr2	stalkie_big_nohaplotig	exon	104715520	104715611	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 3377 3468 +
Chr2	stalkie_big_nohaplotig	exon	104715703	104715829	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 3469 3595 +
Chr2	stalkie_big_nohaplotig	exon	104716990	104717100	97	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 3596 3706 +
Chr2	stalkie_big_nohaplotig	exon	104718076	104718263	98	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 3707 3894 +
Chr2	stalkie_big_nohaplotig	exon	104721516	104721617	99	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 3895 3996 +
Chr2	stalkie_big_nohaplotig	exon	104722031	104722345	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 3997 4311 +
Chr2	stalkie_big_nohaplotig	exon	104722404	104722576	99	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 4312 4484 +
Chr2	stalkie_big_nohaplotig	exon	104722797	104723177	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 4485 4865 +
Chr2	stalkie_big_nohaplotig	exon	104723256	104723340	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 4866 4950 +
Chr2	stalkie_big_nohaplotig	exon	104723747	104723851	100	+	.	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 4951 5055 +
Chr2	stalkie_big_nohaplotig	CDS	104702844	104702916	.	+	0	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 1 73 +
Chr2	stalkie_big_nohaplotig	CDS	104704016	104704147	.	+	2	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 74 205 +
Chr2	stalkie_big_nohaplotig	CDS	104704201	104704285	.	+	2	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 206 290 +
Chr2	stalkie_big_nohaplotig	CDS	104705136	104705316	.	+	1	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 291 471 +
Chr2	stalkie_big_nohaplotig	CDS	104705451	104705620	.	+	0	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 472 641 +
Chr2	stalkie_big_nohaplotig	CDS	104705848	104706028	.	+	1	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 642 822 +
Chr2	stalkie_big_nohaplotig	CDS	104706175	104706253	.	+	0	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 823 901 +
Chr2	stalkie_big_nohaplotig	CDS	104706317	104706411	.	+	2	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 902 996 +
Chr2	stalkie_big_nohaplotig	CDS	104706539	104706718	.	+	0	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 997 1176 +
Chr2	stalkie_big_nohaplotig	CDS	104707602	104707775	.	+	0	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 1177 1350 +
Chr2	stalkie_big_nohaplotig	CDS	104708202	104708395	.	+	0	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 1351 1544 +
Chr2	stalkie_big_nohaplotig	CDS	104708454	104708682	.	+	1	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 1545 1773 +
Chr2	stalkie_big_nohaplotig	CDS	104708880	104709049	.	+	0	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 1774 1943 +
Chr2	stalkie_big_nohaplotig	CDS	104709115	104709281	.	+	1	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 1944 2110 +
Chr2	stalkie_big_nohaplotig	CDS	104710333	104710446	.	+	2	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 2111 2224 +
Chr2	stalkie_big_nohaplotig	CDS	104710512	104710572	.	+	2	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 2225 2285 +
Chr2	stalkie_big_nohaplotig	CDS	104710703	104710859	.	+	1	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 2286 2442 +
Chr2	stalkie_big_nohaplotig	CDS	104711187	104711322	.	+	0	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 2443 2578 +
Chr2	stalkie_big_nohaplotig	CDS	104712240	104712440	.	+	2	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 2579 2779 +
Chr2	stalkie_big_nohaplotig	CDS	104712494	104712609	.	+	2	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 2780 2895 +
Chr2	stalkie_big_nohaplotig	CDS	104714717	104714813	.	+	0	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 2896 2992 +
Chr2	stalkie_big_nohaplotig	CDS	104714956	104715211	.	+	2	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 2993 3248 +
Chr2	stalkie_big_nohaplotig	CDS	104715333	104715460	.	+	1	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 3249 3376 +
Chr2	stalkie_big_nohaplotig	CDS	104715520	104715611	.	+	2	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 3377 3468 +
Chr2	stalkie_big_nohaplotig	CDS	104715703	104715829	.	+	0	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 3469 3595 +
Chr2	stalkie_big_nohaplotig	CDS	104716990	104717100	.	+	2	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 3596 3706 +
Chr2	stalkie_big_nohaplotig	CDS	104718076	104718263	.	+	2	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 3707 3894 +
Chr2	stalkie_big_nohaplotig	CDS	104721516	104721617	.	+	0	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 3895 3996 +
Chr2	stalkie_big_nohaplotig	CDS	104722031	104722345	.	+	0	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 3997 4311 +
Chr2	stalkie_big_nohaplotig	CDS	104722404	104722576	.	+	0	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 4312 4484 +
Chr2	stalkie_big_nohaplotig	CDS	104722797	104723177	.	+	1	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 4485 4865 +
Chr2	stalkie_big_nohaplotig	CDS	104723256	104723340	.	+	1	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 4866 4950 +
Chr2	stalkie_big_nohaplotig	CDS	104723747	104723851	.	+	0	Parent=FBgn0038247.1.mrna1;Target=FBgn0038247.1 4951 5055 +
Chr2	gffcl	locus	104724204	104733744	.	-	.	ID=RLOC_00020186;geneIDs=FBgn0020385.1.path1;transcripts=FBgn0020385.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104724204	104733744	.	-	.	ID=FBgn0020385.1.mrna1;geneID=FBgn0020385.1.path1;Name=FBgn0020385.1;Dir=sensecoverage=100.0;identity=100.0;matches=2871;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020186
Chr2	stalkie_big_nohaplotig	exon	104724204	104724443	100	-	.	Parent=FBgn0020385.1.mrna1;Target=FBgn0020385.1 2632 2871 +
Chr2	stalkie_big_nohaplotig	exon	104724498	104724783	100	-	.	Parent=FBgn0020385.1.mrna1;Target=FBgn0020385.1 2346 2631 +
Chr2	stalkie_big_nohaplotig	exon	104724842	104725993	100	-	.	Parent=FBgn0020385.1.mrna1;Target=FBgn0020385.1 1194 2345 +
Chr2	stalkie_big_nohaplotig	exon	104727041	104727214	100	-	.	Parent=FBgn0020385.1.mrna1;Target=FBgn0020385.1 1020 1193 +
Chr2	stalkie_big_nohaplotig	exon	104727273	104727498	100	-	.	Parent=FBgn0020385.1.mrna1;Target=FBgn0020385.1 794 1019 +
Chr2	stalkie_big_nohaplotig	exon	104728728	104728839	100	-	.	Parent=FBgn0020385.1.mrna1;Target=FBgn0020385.1 682 793 +
Chr2	stalkie_big_nohaplotig	exon	104728906	104729265	100	-	.	Parent=FBgn0020385.1.mrna1;Target=FBgn0020385.1 322 681 +
Chr2	stalkie_big_nohaplotig	exon	104733342	104733552	100	-	.	Parent=FBgn0020385.1.mrna1;Target=FBgn0020385.1 111 321 +
Chr2	stalkie_big_nohaplotig	exon	104733635	104733744	100	-	.	Parent=FBgn0020385.1.mrna1;Target=FBgn0020385.1 1 110 +
Chr2	stalkie_big_nohaplotig	CDS	104724204	104724443	.	-	0	Parent=FBgn0020385.1.mrna1;Target=FBgn0020385.1 2632 2871 +
Chr2	stalkie_big_nohaplotig	CDS	104724498	104724783	.	-	1	Parent=FBgn0020385.1.mrna1;Target=FBgn0020385.1 2346 2631 +
Chr2	stalkie_big_nohaplotig	CDS	104724842	104725993	.	-	1	Parent=FBgn0020385.1.mrna1;Target=FBgn0020385.1 1194 2345 +
Chr2	stalkie_big_nohaplotig	CDS	104727041	104727214	.	-	1	Parent=FBgn0020385.1.mrna1;Target=FBgn0020385.1 1020 1193 +
Chr2	stalkie_big_nohaplotig	CDS	104727273	104727498	.	-	2	Parent=FBgn0020385.1.mrna1;Target=FBgn0020385.1 794 1019 +
Chr2	stalkie_big_nohaplotig	CDS	104728728	104728839	.	-	0	Parent=FBgn0020385.1.mrna1;Target=FBgn0020385.1 682 793 +
Chr2	stalkie_big_nohaplotig	CDS	104728906	104729265	.	-	0	Parent=FBgn0020385.1.mrna1;Target=FBgn0020385.1 322 681 +
Chr2	stalkie_big_nohaplotig	CDS	104733342	104733552	.	-	1	Parent=FBgn0020385.1.mrna1;Target=FBgn0020385.1 111 321 +
Chr2	stalkie_big_nohaplotig	CDS	104733635	104733744	.	-	0	Parent=FBgn0020385.1.mrna1;Target=FBgn0020385.1 1 110 +
Chr2	stalkie_big_nohaplotig	mRNA	104749364	104750256	.	+	.	ID=comp152224_c0_seq1.mrna1;geneID=comp152224_c0_seq1.path1;Name=comp152224_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=514;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020188
Chr2	stalkie_big_nohaplotig	exon	104749364	104749831	100	+	.	Parent=comp152224_c0_seq1.mrna1;Target=comp152224_c0_seq1 48 515 -
Chr2	stalkie_big_nohaplotig	exon	104750210	104750256	97	+	.	Parent=comp152224_c0_seq1.mrna1;Target=comp152224_c0_seq1 1 47 -
Chr2	stalkie_big_nohaplotig	CDS	104749771	104749831	.	+	0	Parent=comp152224_c0_seq1.mrna1;Target=comp152224_c0_seq1 48 108 .
Chr2	stalkie_big_nohaplotig	CDS	104750210	104750256	.	+	2	Parent=comp152224_c0_seq1.mrna1;Target=comp152224_c0_seq1 1 47 .
Chr2	gffcl	locus	104761004	104761852	.	+	.	ID=RLOC_00020189;geneIDs=comp151509_c0_seq1.path1;transcripts=comp151509_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104761004	104761852	.	+	.	ID=comp151509_c0_seq1.mrna1;geneID=comp151509_c0_seq1.path1;Name=comp151509_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=848;mismatches=1;indels=0;unknowns=0;Target=comp151509_c0_seq1 849 1 .;CDS_Target=comp151509_c0_seq1 141 1 .;locus=RLOC_00020189
Chr2	stalkie_big_nohaplotig	exon	104761004	104761852	99	+	.	Parent=comp151509_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104761004	104761144	.	+	0	Parent=comp151509_c0_seq1.mrna1
Chr2	gffcl	locus	104762453	104763027	.	-	.	ID=RLOC_00020190;geneIDs=comp1028449_c0_seq1.path1;transcripts=comp1028449_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104762453	104763027	.	-	.	ID=comp1028449_c0_seq1.mrna1;geneID=comp1028449_c0_seq1.path1;Name=comp1028449_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=575;mismatches=0;indels=0;unknowns=0;Target=comp1028449_c0_seq1 575 1 .;CDS_Target=comp1028449_c0_seq1 498 412 .;locus=RLOC_00020190
Chr2	stalkie_big_nohaplotig	exon	104762453	104763027	100	-	.	Parent=comp1028449_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104762530	104762616	.	-	0	Parent=comp1028449_c0_seq1.mrna1
Chr2	gffcl	locus	104777938	104778709	.	-	.	ID=RLOC_00020191;geneIDs=comp101051_c0_seq1.path1;transcripts=comp101051_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104777938	104778709	.	-	.	ID=comp101051_c0_seq1.mrna1;geneID=comp101051_c0_seq1.path1;Name=comp101051_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.4;matches=767;mismatches=5;indels=0;unknowns=0;Target=comp101051_c0_seq1 774 3 .;CDS_Target=comp101051_c0_seq1 519 445 .;locus=RLOC_00020191
Chr2	stalkie_big_nohaplotig	exon	104777938	104778709	99	-	.	Parent=comp101051_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	104778193	104778267	.	-	0	Parent=comp101051_c0_seq1.mrna1
Chr2	gffcl	locus	104783921	106656904	.	-	.	ID=RLOC_00020192;geneIDs=comp163387_c0_seq1.path1;transcripts=comp163387_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104783921	106656904	.	-	.	ID=comp163387_c0_seq1.mrna1;geneID=comp163387_c0_seq1.path1;Name=comp163387_c0_seq1;Dir=indeterminatecoverage=95.5;identity=97.5;matches=2583;mismatches=32;indels=34;unknowns=0;Target=comp163387_c0_seq1 2403 1228 .;locus=RLOC_00020192
Chr2	stalkie_big_nohaplotig	exon	104783921	104783926	100	-	.	Parent=comp163387_c0_seq1.mrna1;Target=comp163387_c0_seq1 2641 2636 .
Chr2	stalkie_big_nohaplotig	exon	104788781	104788786	38	-	.	Parent=comp163387_c0_seq1.mrna1;Target=comp163387_c0_seq1 2635 2623 .
Chr2	stalkie_big_nohaplotig	exon	104790086	104790093	100	-	.	Parent=comp163387_c0_seq1.mrna1;Target=comp163387_c0_seq1 2622 2615 .
Chr2	stalkie_big_nohaplotig	exon	104798016	104798051	45	-	.	Parent=comp163387_c0_seq1.mrna1;Target=comp163387_c0_seq1 2614 2560 .
Chr2	stalkie_big_nohaplotig	exon	104800366	104800374	100	-	.	Parent=comp163387_c0_seq1.mrna1;Target=comp163387_c0_seq1 2559 2551 .
Chr2	stalkie_big_nohaplotig	exon	104800723	104800729	100	-	.	Parent=comp163387_c0_seq1.mrna1;Target=comp163387_c0_seq1 2550 2544 .
Chr2	stalkie_big_nohaplotig	exon	104807773	104807777	100	-	.	Parent=comp163387_c0_seq1.mrna1;Target=comp163387_c0_seq1 2543 2539 .
Chr2	stalkie_big_nohaplotig	exon	104815372	104815375	100	-	.	Parent=comp163387_c0_seq1.mrna1;Target=comp163387_c0_seq1 2538 2535 .
Chr2	stalkie_big_nohaplotig	exon	104816700	104816704	100	-	.	Parent=comp163387_c0_seq1.mrna1;Target=comp163387_c0_seq1 2534 2530 .
Chr2	stalkie_big_nohaplotig	exon	104822359	104822363	100	-	.	Parent=comp163387_c0_seq1.mrna1;Target=comp163387_c0_seq1 2529 2525 .
Chr2	stalkie_big_nohaplotig	exon	104823977	104823979	100	-	.	Parent=comp163387_c0_seq1.mrna1;Target=comp163387_c0_seq1 2524 2522 .
Chr2	stalkie_big_nohaplotig	exon	104824432	104824445	92	-	.	Parent=comp163387_c0_seq1.mrna1;Target=comp163387_c0_seq1 2521 2508 .
Chr2	stalkie_big_nohaplotig	exon	104830952	104830985	61	-	.	Parent=comp163387_c0_seq1.mrna1;Target=comp163387_c0_seq1 2507 2482 .
Chr2	stalkie_big_nohaplotig	exon	104840513	104840515	100	-	.	Parent=comp163387_c0_seq1.mrna1;Target=comp163387_c0_seq1 2481 2479 .
Chr2	stalkie_big_nohaplotig	exon	104846233	104846238	100	-	.	Parent=comp163387_c0_seq1.mrna1;Target=comp163387_c0_seq1 2478 2473 .
Chr2	stalkie_big_nohaplotig	exon	106654433	106656904	99	-	.	Parent=comp163387_c0_seq1.mrna1;Target=comp163387_c0_seq1 2472 1 .
Chr2	stalkie_big_nohaplotig	CDS	106654502	106655677	.	-	0	Parent=comp163387_c0_seq1.mrna1
Chr2	gffcl	locus	104863428	104864979	.	-	.	ID=RLOC_00020193;geneIDs=ORF659.path2;transcripts=ORF659.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	104863428	104864979	.	-	.	ID=ORF659.mrna2;geneID=ORF659.path2;Name=ORF659;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1552;mismatches=0;indels=2;unknowns=0;Target=ORF659 1554 1 .;CDS_Target=ORF659 107 3 .;locus=RLOC_00020193
Chr2	stalkie_big_nohaplotig	exon	104863428	104864979	99	-	.	Parent=ORF659.mrna2
Chr2	stalkie_big_nohaplotig	CDS	104864874	104864977	.	-	0	Parent=ORF659.mrna2
Chr2	gffcl	locus	104949450	104955025	.	+	.	ID=RLOC_00020194;geneIDs=FBgn0040350.1.path1;transcripts=FBgn0040350.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104949450	104955025	.	+	.	ID=FBgn0040350.1.mrna1;geneID=FBgn0040350.1.path1;Name=FBgn0040350.1;Dir=sensecoverage=100.0;identity=99.9;matches=1590;mismatches=0;indels=1;unknowns=0;locus=RLOC_00020194
Chr2	stalkie_big_nohaplotig	exon	104949450	104949498	100	+	.	Parent=FBgn0040350.1.mrna1;Target=FBgn0040350.1 1 49 +
Chr2	stalkie_big_nohaplotig	exon	104949622	104949822	100	+	.	Parent=FBgn0040350.1.mrna1;Target=FBgn0040350.1 50 250 +
Chr2	stalkie_big_nohaplotig	exon	104949881	104950043	100	+	.	Parent=FBgn0040350.1.mrna1;Target=FBgn0040350.1 251 413 +
Chr2	stalkie_big_nohaplotig	exon	104950118	104950300	100	+	.	Parent=FBgn0040350.1.mrna1;Target=FBgn0040350.1 414 596 +
Chr2	stalkie_big_nohaplotig	exon	104950368	104950549	99	+	.	Parent=FBgn0040350.1.mrna1;Target=FBgn0040350.1 597 777 +
Chr2	stalkie_big_nohaplotig	exon	104950604	104950803	100	+	.	Parent=FBgn0040350.1.mrna1;Target=FBgn0040350.1 778 977 +
Chr2	stalkie_big_nohaplotig	exon	104950864	104951023	100	+	.	Parent=FBgn0040350.1.mrna1;Target=FBgn0040350.1 978 1137 +
Chr2	stalkie_big_nohaplotig	exon	104951097	104951208	100	+	.	Parent=FBgn0040350.1.mrna1;Target=FBgn0040350.1 1138 1249 +
Chr2	stalkie_big_nohaplotig	exon	104951273	104951432	100	+	.	Parent=FBgn0040350.1.mrna1;Target=FBgn0040350.1 1250 1409 +
Chr2	stalkie_big_nohaplotig	exon	104953554	104953681	100	+	.	Parent=FBgn0040350.1.mrna1;Target=FBgn0040350.1 1410 1537 +
Chr2	stalkie_big_nohaplotig	exon	104954973	104955025	100	+	.	Parent=FBgn0040350.1.mrna1;Target=FBgn0040350.1 1538 1590 +
Chr2	stalkie_big_nohaplotig	CDS	104950463	104950549	.	+	0	Parent=FBgn0040350.1.mrna1;Target=FBgn0040350.1 691 777 +
Chr2	stalkie_big_nohaplotig	CDS	104950604	104950803	.	+	0	Parent=FBgn0040350.1.mrna1;Target=FBgn0040350.1 778 977 +
Chr2	stalkie_big_nohaplotig	CDS	104950864	104951023	.	+	1	Parent=FBgn0040350.1.mrna1;Target=FBgn0040350.1 978 1137 +
Chr2	stalkie_big_nohaplotig	CDS	104951097	104951208	.	+	0	Parent=FBgn0040350.1.mrna1;Target=FBgn0040350.1 1138 1249 +
Chr2	stalkie_big_nohaplotig	CDS	104951273	104951432	.	+	2	Parent=FBgn0040350.1.mrna1;Target=FBgn0040350.1 1250 1409 +
Chr2	stalkie_big_nohaplotig	CDS	104953554	104953681	.	+	1	Parent=FBgn0040350.1.mrna1;Target=FBgn0040350.1 1410 1537 +
Chr2	stalkie_big_nohaplotig	CDS	104954973	104955025	.	+	2	Parent=FBgn0040350.1.mrna1;Target=FBgn0040350.1 1538 1590 +
Chr2	gffcl	locus	104959243	104962393	.	+	.	ID=RLOC_00020195;geneIDs=ORF2281.path1;transcripts=ORF2281.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104959243	104962393	.	+	.	ID=ORF2281.mrna1;geneID=ORF2281.path1;Name=ORF2281;Dir=sensecoverage=100.0;identity=99.3;matches=876;mismatches=6;indels=0;unknowns=0;locus=RLOC_00020195
Chr2	stalkie_big_nohaplotig	exon	104959243	104959325	100	+	.	Parent=ORF2281.mrna1;Target=ORF2281 1 83 +
Chr2	stalkie_big_nohaplotig	exon	104961595	104962393	99	+	.	Parent=ORF2281.mrna1;Target=ORF2281 84 882 +
Chr2	stalkie_big_nohaplotig	CDS	104959243	104959325	.	+	0	Parent=ORF2281.mrna1;Target=ORF2281 1 83 +
Chr2	stalkie_big_nohaplotig	CDS	104961595	104962393	.	+	1	Parent=ORF2281.mrna1;Target=ORF2281 84 882 +
Chr2	gffcl	locus	104972551	104977741	.	+	.	ID=RLOC_00020196;geneIDs=FBgn0051272.1.path1;transcripts=FBgn0051272.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104972551	104977741	.	+	.	ID=FBgn0051272.1.mrna1;geneID=FBgn0051272.1.path1;Name=FBgn0051272.1;Dir=sensecoverage=100.0;identity=100.0;matches=1614;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020196
Chr2	stalkie_big_nohaplotig	exon	104972551	104972585	100	+	.	Parent=FBgn0051272.1.mrna1;Target=FBgn0051272.1 1 35 +
Chr2	stalkie_big_nohaplotig	exon	104975416	104975787	100	+	.	Parent=FBgn0051272.1.mrna1;Target=FBgn0051272.1 36 407 +
Chr2	stalkie_big_nohaplotig	exon	104975869	104976050	100	+	.	Parent=FBgn0051272.1.mrna1;Target=FBgn0051272.1 408 589 +
Chr2	stalkie_big_nohaplotig	exon	104976110	104976291	100	+	.	Parent=FBgn0051272.1.mrna1;Target=FBgn0051272.1 590 771 +
Chr2	stalkie_big_nohaplotig	exon	104976433	104976647	100	+	.	Parent=FBgn0051272.1.mrna1;Target=FBgn0051272.1 772 986 +
Chr2	stalkie_big_nohaplotig	exon	104976764	104976932	100	+	.	Parent=FBgn0051272.1.mrna1;Target=FBgn0051272.1 987 1155 +
Chr2	stalkie_big_nohaplotig	exon	104977000	104977117	100	+	.	Parent=FBgn0051272.1.mrna1;Target=FBgn0051272.1 1156 1273 +
Chr2	stalkie_big_nohaplotig	exon	104977271	104977430	100	+	.	Parent=FBgn0051272.1.mrna1;Target=FBgn0051272.1 1274 1433 +
Chr2	stalkie_big_nohaplotig	exon	104977495	104977622	100	+	.	Parent=FBgn0051272.1.mrna1;Target=FBgn0051272.1 1434 1561 +
Chr2	stalkie_big_nohaplotig	exon	104977689	104977741	100	+	.	Parent=FBgn0051272.1.mrna1;Target=FBgn0051272.1 1562 1614 +
Chr2	stalkie_big_nohaplotig	CDS	104972551	104972585	.	+	0	Parent=FBgn0051272.1.mrna1;Target=FBgn0051272.1 1 35 +
Chr2	stalkie_big_nohaplotig	CDS	104975416	104975787	.	+	1	Parent=FBgn0051272.1.mrna1;Target=FBgn0051272.1 36 407 +
Chr2	stalkie_big_nohaplotig	CDS	104975869	104976050	.	+	1	Parent=FBgn0051272.1.mrna1;Target=FBgn0051272.1 408 589 +
Chr2	stalkie_big_nohaplotig	CDS	104976110	104976291	.	+	2	Parent=FBgn0051272.1.mrna1;Target=FBgn0051272.1 590 771 +
Chr2	stalkie_big_nohaplotig	CDS	104976433	104976647	.	+	0	Parent=FBgn0051272.1.mrna1;Target=FBgn0051272.1 772 986 +
Chr2	stalkie_big_nohaplotig	CDS	104976764	104976932	.	+	1	Parent=FBgn0051272.1.mrna1;Target=FBgn0051272.1 987 1155 +
Chr2	stalkie_big_nohaplotig	CDS	104977000	104977117	.	+	0	Parent=FBgn0051272.1.mrna1;Target=FBgn0051272.1 1156 1273 +
Chr2	stalkie_big_nohaplotig	CDS	104977271	104977430	.	+	2	Parent=FBgn0051272.1.mrna1;Target=FBgn0051272.1 1274 1433 +
Chr2	stalkie_big_nohaplotig	CDS	104977495	104977622	.	+	1	Parent=FBgn0051272.1.mrna1;Target=FBgn0051272.1 1434 1561 +
Chr2	stalkie_big_nohaplotig	CDS	104977689	104977741	.	+	2	Parent=FBgn0051272.1.mrna1;Target=FBgn0051272.1 1562 1614 +
Chr2	gffcl	locus	104981140	104985290	.	+	.	ID=RLOC_00020197;geneIDs=FBgn0051272.2.path1;transcripts=FBgn0051272.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104981140	104985290	.	+	.	ID=FBgn0051272.2.mrna1;geneID=FBgn0051272.2.path1;Name=FBgn0051272.2;Dir=sensecoverage=100.0;identity=99.8;matches=1616;mismatches=4;indels=0;unknowns=0;locus=RLOC_00020197
Chr2	stalkie_big_nohaplotig	exon	104981140	104981182	100	+	.	Parent=FBgn0051272.2.mrna1;Target=FBgn0051272.2 1 43 +
Chr2	stalkie_big_nohaplotig	exon	104982879	104983248	99	+	.	Parent=FBgn0051272.2.mrna1;Target=FBgn0051272.2 44 413 +
Chr2	stalkie_big_nohaplotig	exon	104983311	104983492	99	+	.	Parent=FBgn0051272.2.mrna1;Target=FBgn0051272.2 414 595 +
Chr2	stalkie_big_nohaplotig	exon	104983549	104983730	99	+	.	Parent=FBgn0051272.2.mrna1;Target=FBgn0051272.2 596 777 +
Chr2	stalkie_big_nohaplotig	exon	104983793	104984010	99	+	.	Parent=FBgn0051272.2.mrna1;Target=FBgn0051272.2 778 995 +
Chr2	stalkie_big_nohaplotig	exon	104984086	104984251	100	+	.	Parent=FBgn0051272.2.mrna1;Target=FBgn0051272.2 996 1161 +
Chr2	stalkie_big_nohaplotig	exon	104984317	104984434	100	+	.	Parent=FBgn0051272.2.mrna1;Target=FBgn0051272.2 1162 1279 +
Chr2	stalkie_big_nohaplotig	exon	104984813	104984972	100	+	.	Parent=FBgn0051272.2.mrna1;Target=FBgn0051272.2 1280 1439 +
Chr2	stalkie_big_nohaplotig	exon	104985034	104985161	100	+	.	Parent=FBgn0051272.2.mrna1;Target=FBgn0051272.2 1440 1567 +
Chr2	stalkie_big_nohaplotig	exon	104985238	104985290	100	+	.	Parent=FBgn0051272.2.mrna1;Target=FBgn0051272.2 1568 1620 +
Chr2	stalkie_big_nohaplotig	CDS	104981140	104981182	.	+	0	Parent=FBgn0051272.2.mrna1;Target=FBgn0051272.2 1 43 +
Chr2	stalkie_big_nohaplotig	CDS	104982879	104983248	.	+	2	Parent=FBgn0051272.2.mrna1;Target=FBgn0051272.2 44 413 +
Chr2	stalkie_big_nohaplotig	CDS	104983311	104983492	.	+	1	Parent=FBgn0051272.2.mrna1;Target=FBgn0051272.2 414 595 +
Chr2	stalkie_big_nohaplotig	CDS	104983549	104983730	.	+	2	Parent=FBgn0051272.2.mrna1;Target=FBgn0051272.2 596 777 +
Chr2	stalkie_big_nohaplotig	CDS	104983793	104984010	.	+	0	Parent=FBgn0051272.2.mrna1;Target=FBgn0051272.2 778 995 +
Chr2	stalkie_big_nohaplotig	CDS	104984086	104984251	.	+	1	Parent=FBgn0051272.2.mrna1;Target=FBgn0051272.2 996 1161 +
Chr2	stalkie_big_nohaplotig	CDS	104984317	104984434	.	+	0	Parent=FBgn0051272.2.mrna1;Target=FBgn0051272.2 1162 1279 +
Chr2	stalkie_big_nohaplotig	CDS	104984813	104984972	.	+	2	Parent=FBgn0051272.2.mrna1;Target=FBgn0051272.2 1280 1439 +
Chr2	stalkie_big_nohaplotig	CDS	104985034	104985161	.	+	1	Parent=FBgn0051272.2.mrna1;Target=FBgn0051272.2 1440 1567 +
Chr2	stalkie_big_nohaplotig	CDS	104985238	104985290	.	+	2	Parent=FBgn0051272.2.mrna1;Target=FBgn0051272.2 1568 1620 +
Chr2	gffcl	locus	104989222	104993846	.	+	.	ID=RLOC_00020198;geneIDs=FBgn0051272.3.path1;transcripts=FBgn0051272.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104989222	104993846	.	+	.	ID=FBgn0051272.3.mrna1;geneID=FBgn0051272.3.path1;Name=FBgn0051272.3;Dir=sensecoverage=100.0;identity=99.4;matches=1575;mismatches=9;indels=0;unknowns=0;locus=RLOC_00020198
Chr2	stalkie_big_nohaplotig	exon	104989222	104989261	100	+	.	Parent=FBgn0051272.3.mrna1;Target=FBgn0051272.3 1 40 +
Chr2	stalkie_big_nohaplotig	exon	104990589	104990958	100	+	.	Parent=FBgn0051272.3.mrna1;Target=FBgn0051272.3 41 410 +
Chr2	stalkie_big_nohaplotig	exon	104991030	104991211	100	+	.	Parent=FBgn0051272.3.mrna1;Target=FBgn0051272.3 411 592 +
Chr2	stalkie_big_nohaplotig	exon	104991278	104991459	100	+	.	Parent=FBgn0051272.3.mrna1;Target=FBgn0051272.3 593 774 +
Chr2	stalkie_big_nohaplotig	exon	104991562	104991749	100	+	.	Parent=FBgn0051272.3.mrna1;Target=FBgn0051272.3 775 962 +
Chr2	stalkie_big_nohaplotig	exon	104991807	104991969	96	+	.	Parent=FBgn0051272.3.mrna1;Target=FBgn0051272.3 963 1125 +
Chr2	stalkie_big_nohaplotig	exon	104992028	104992145	97	+	.	Parent=FBgn0051272.3.mrna1;Target=FBgn0051272.3 1126 1243 +
Chr2	stalkie_big_nohaplotig	exon	104993392	104993551	100	+	.	Parent=FBgn0051272.3.mrna1;Target=FBgn0051272.3 1244 1403 +
Chr2	stalkie_big_nohaplotig	exon	104993607	104993734	100	+	.	Parent=FBgn0051272.3.mrna1;Target=FBgn0051272.3 1404 1531 +
Chr2	stalkie_big_nohaplotig	exon	104993794	104993846	100	+	.	Parent=FBgn0051272.3.mrna1;Target=FBgn0051272.3 1532 1584 +
Chr2	stalkie_big_nohaplotig	CDS	104989222	104989261	.	+	0	Parent=FBgn0051272.3.mrna1;Target=FBgn0051272.3 1 40 +
Chr2	stalkie_big_nohaplotig	CDS	104990589	104990958	.	+	2	Parent=FBgn0051272.3.mrna1;Target=FBgn0051272.3 41 410 +
Chr2	stalkie_big_nohaplotig	CDS	104991030	104991211	.	+	1	Parent=FBgn0051272.3.mrna1;Target=FBgn0051272.3 411 592 +
Chr2	stalkie_big_nohaplotig	CDS	104991278	104991459	.	+	2	Parent=FBgn0051272.3.mrna1;Target=FBgn0051272.3 593 774 +
Chr2	stalkie_big_nohaplotig	CDS	104991562	104991749	.	+	0	Parent=FBgn0051272.3.mrna1;Target=FBgn0051272.3 775 962 +
Chr2	stalkie_big_nohaplotig	CDS	104991807	104991969	.	+	1	Parent=FBgn0051272.3.mrna1;Target=FBgn0051272.3 963 1125 +
Chr2	stalkie_big_nohaplotig	CDS	104992028	104992145	.	+	0	Parent=FBgn0051272.3.mrna1;Target=FBgn0051272.3 1126 1243 +
Chr2	stalkie_big_nohaplotig	CDS	104993392	104993551	.	+	2	Parent=FBgn0051272.3.mrna1;Target=FBgn0051272.3 1244 1403 +
Chr2	stalkie_big_nohaplotig	CDS	104993607	104993734	.	+	1	Parent=FBgn0051272.3.mrna1;Target=FBgn0051272.3 1404 1531 +
Chr2	stalkie_big_nohaplotig	CDS	104993794	104993846	.	+	2	Parent=FBgn0051272.3.mrna1;Target=FBgn0051272.3 1532 1584 +
Chr2	gffcl	locus	104995647	104996469	.	-	.	ID=RLOC_00020199;geneIDs=FBgn0051390.1.path1;transcripts=FBgn0051390.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	104995647	104996469	.	-	.	ID=FBgn0051390.1.mrna1;geneID=FBgn0051390.1.path1;Name=FBgn0051390.1;Dir=sensecoverage=100.0;identity=99.6;matches=708;mismatches=3;indels=0;unknowns=0;locus=RLOC_00020199
Chr2	stalkie_big_nohaplotig	exon	104995647	104995976	99	-	.	Parent=FBgn0051390.1.mrna1;Target=FBgn0051390.1 382 711 +
Chr2	stalkie_big_nohaplotig	exon	104996089	104996469	99	-	.	Parent=FBgn0051390.1.mrna1;Target=FBgn0051390.1 1 381 +
Chr2	stalkie_big_nohaplotig	CDS	104995647	104995976	.	-	0	Parent=FBgn0051390.1.mrna1;Target=FBgn0051390.1 382 711 +
Chr2	stalkie_big_nohaplotig	CDS	104996089	104996469	.	-	0	Parent=FBgn0051390.1.mrna1;Target=FBgn0051390.1 1 381 +
Chr2	gffcl	locus	105000197	105008700	.	+	.	ID=RLOC_00020200;geneIDs=comp162421_c1_seq1.path1;transcripts=comp162421_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105000197	105008700	.	+	.	ID=comp162421_c1_seq1.mrna1;geneID=comp162421_c1_seq1.path1;Name=comp162421_c1_seq1;Dir=sensecoverage=49.7;identity=99.3;matches=4173;mismatches=19;indels=10;unknowns=0;locus=RLOC_00020200
Chr2	stalkie_big_nohaplotig	exon	105000197	105000479	99	+	.	Parent=comp162421_c1_seq1.mrna1;Target=comp162421_c1_seq1 4236 4518 +
Chr2	stalkie_big_nohaplotig	exon	105000654	105000820	99	+	.	Parent=comp162421_c1_seq1.mrna1;Target=comp162421_c1_seq1 4519 4685 +
Chr2	stalkie_big_nohaplotig	exon	105000887	105001074	99	+	.	Parent=comp162421_c1_seq1.mrna1;Target=comp162421_c1_seq1 4686 4873 +
Chr2	stalkie_big_nohaplotig	exon	105003921	105005140	99	+	.	Parent=comp162421_c1_seq1.mrna1;Target=comp162421_c1_seq1 4874 6093 +
Chr2	stalkie_big_nohaplotig	exon	105005196	105005476	100	+	.	Parent=comp162421_c1_seq1.mrna1;Target=comp162421_c1_seq1 6094 6374 +
Chr2	stalkie_big_nohaplotig	exon	105005545	105005647	100	+	.	Parent=comp162421_c1_seq1.mrna1;Target=comp162421_c1_seq1 6375 6477 +
Chr2	stalkie_big_nohaplotig	exon	105005711	105006411	98	+	.	Parent=comp162421_c1_seq1.mrna1;Target=comp162421_c1_seq1 6478 7172 +
Chr2	stalkie_big_nohaplotig	exon	105006477	105006680	100	+	.	Parent=comp162421_c1_seq1.mrna1;Target=comp162421_c1_seq1 7173 7376 +
Chr2	stalkie_big_nohaplotig	exon	105007646	105008700	98	+	.	Parent=comp162421_c1_seq1.mrna1;Target=comp162421_c1_seq1 7377 8427 +
Chr2	stalkie_big_nohaplotig	CDS	105000467	105000479	.	+	0	Parent=comp162421_c1_seq1.mrna1;Target=comp162421_c1_seq1 4506 4518 +
Chr2	stalkie_big_nohaplotig	CDS	105000654	105000820	.	+	2	Parent=comp162421_c1_seq1.mrna1;Target=comp162421_c1_seq1 4519 4685 +
Chr2	stalkie_big_nohaplotig	CDS	105000887	105001074	.	+	0	Parent=comp162421_c1_seq1.mrna1;Target=comp162421_c1_seq1 4686 4873 +
Chr2	stalkie_big_nohaplotig	CDS	105003921	105005140	.	+	1	Parent=comp162421_c1_seq1.mrna1;Target=comp162421_c1_seq1 4874 6093 +
Chr2	stalkie_big_nohaplotig	CDS	105005196	105005476	.	+	2	Parent=comp162421_c1_seq1.mrna1;Target=comp162421_c1_seq1 6094 6374 +
Chr2	stalkie_big_nohaplotig	CDS	105005545	105005647	.	+	0	Parent=comp162421_c1_seq1.mrna1;Target=comp162421_c1_seq1 6375 6477 +
Chr2	stalkie_big_nohaplotig	CDS	105005711	105006411	.	+	2	Parent=comp162421_c1_seq1.mrna1;Target=comp162421_c1_seq1 6478 7172 +
Chr2	stalkie_big_nohaplotig	CDS	105006477	105006680	.	+	0	Parent=comp162421_c1_seq1.mrna1;Target=comp162421_c1_seq1 7173 7376 +
Chr2	stalkie_big_nohaplotig	CDS	105007646	105008149	.	+	0	Parent=comp162421_c1_seq1.mrna1;Target=comp162421_c1_seq1 7377 7880 +
Chr2	gffcl	locus	105014057	105014962	.	-	.	ID=RLOC_00020201;geneIDs=FBgn0010421.2.path1;transcripts=FBgn0010421.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105014057	105014962	.	-	.	ID=FBgn0010421.2.mrna1;geneID=FBgn0010421.2.path1;Name=FBgn0010421.2;Dir=sensecoverage=100.0;identity=100.0;matches=834;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020201
Chr2	stalkie_big_nohaplotig	exon	105014057	105014350	100	-	.	Parent=FBgn0010421.2.mrna1;Target=FBgn0010421.2 541 834 +
Chr2	stalkie_big_nohaplotig	exon	105014423	105014962	100	-	.	Parent=FBgn0010421.2.mrna1;Target=FBgn0010421.2 1 540 +
Chr2	stalkie_big_nohaplotig	CDS	105014057	105014350	.	-	0	Parent=FBgn0010421.2.mrna1;Target=FBgn0010421.2 541 834 +
Chr2	stalkie_big_nohaplotig	CDS	105014423	105014962	.	-	0	Parent=FBgn0010421.2.mrna1;Target=FBgn0010421.2 1 540 +
Chr2	gffcl	locus	105019973	105022066	.	+	.	ID=RLOC_00020202;geneIDs=FBgn0039293.1.path1;transcripts=FBgn0039293.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105019973	105022066	.	+	.	ID=FBgn0039293.1.mrna1;geneID=FBgn0039293.1.path1;Name=FBgn0039293.1;Dir=sensecoverage=100.0;identity=100.0;matches=1878;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020202
Chr2	stalkie_big_nohaplotig	exon	105019973	105020127	100	+	.	Parent=FBgn0039293.1.mrna1;Target=FBgn0039293.1 1 155 +
Chr2	stalkie_big_nohaplotig	exon	105020216	105020584	100	+	.	Parent=FBgn0039293.1.mrna1;Target=FBgn0039293.1 156 524 +
Chr2	stalkie_big_nohaplotig	exon	105020656	105021133	100	+	.	Parent=FBgn0039293.1.mrna1;Target=FBgn0039293.1 525 1002 +
Chr2	stalkie_big_nohaplotig	exon	105021191	105022066	100	+	.	Parent=FBgn0039293.1.mrna1;Target=FBgn0039293.1 1003 1878 +
Chr2	stalkie_big_nohaplotig	CDS	105019973	105020127	.	+	0	Parent=FBgn0039293.1.mrna1;Target=FBgn0039293.1 1 155 +
Chr2	stalkie_big_nohaplotig	CDS	105020216	105020584	.	+	1	Parent=FBgn0039293.1.mrna1;Target=FBgn0039293.1 156 524 +
Chr2	stalkie_big_nohaplotig	CDS	105020656	105021133	.	+	1	Parent=FBgn0039293.1.mrna1;Target=FBgn0039293.1 525 1002 +
Chr2	stalkie_big_nohaplotig	CDS	105021191	105022066	.	+	0	Parent=FBgn0039293.1.mrna1;Target=FBgn0039293.1 1003 1878 +
Chr2	gffcl	locus	105103654	105105126	.	+	.	ID=RLOC_00020203;geneIDs=FBgn0001180.1.path1;transcripts=FBgn0001180.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105103654	105105126	.	+	.	ID=FBgn0001180.1.mrna1;geneID=FBgn0001180.1.path1;Name=FBgn0001180.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1472;mismatches=1;indels=0;unknowns=0;Target=FBgn0001180.1 1473 1 .;locus=RLOC_00020203
Chr2	stalkie_big_nohaplotig	exon	105103654	105105126	99	+	.	Parent=FBgn0001180.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105103654	105105126	.	+	0	Parent=FBgn0001180.1.mrna1
Chr2	gffcl	locus	105133322	105133546	.	-	.	ID=RLOC_00020204;geneIDs=comp116714_c0_seq1.path4;transcripts=comp116714_c0_seq1.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	105133322	105133546	.	-	.	ID=comp116714_c0_seq1.mrna4;geneID=comp116714_c0_seq1.path4;Name=comp116714_c0_seq1;Dir=indeterminatecoverage=99.1;identity=83.0;matches=190;mismatches=29;indels=10;unknowns=0;Target=comp116714_c0_seq1 225 3 .;CDS_Target=comp116714_c0_seq1 218 87 .;locus=RLOC_00020204
Chr2	stalkie_big_nohaplotig	exon	105133322	105133546	82	-	.	Parent=comp116714_c0_seq1.mrna4
Chr2	stalkie_big_nohaplotig	CDS	105133329	105133462	.	-	0	Parent=comp116714_c0_seq1.mrna4
Chr2	gffcl	locus	105138581	105156661	.	+	.	ID=RLOC_00020205;geneIDs=FBgn0038038.2.path1;transcripts=FBgn0038038.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105138581	105156661	.	+	.	ID=FBgn0038038.2.mrna1;geneID=FBgn0038038.2.path1;Name=FBgn0038038.2;Dir=sensecoverage=100.0;identity=99.6;matches=1422;mismatches=6;indels=0;unknowns=0;locus=RLOC_00020205
Chr2	stalkie_big_nohaplotig	exon	105138581	105138635	96	+	.	Parent=FBgn0038038.2.mrna1;Target=FBgn0038038.2 1 55 +
Chr2	stalkie_big_nohaplotig	exon	105139510	105139536	100	+	.	Parent=FBgn0038038.2.mrna1;Target=FBgn0038038.2 56 82 +
Chr2	stalkie_big_nohaplotig	exon	105139600	105139620	100	+	.	Parent=FBgn0038038.2.mrna1;Target=FBgn0038038.2 83 103 +
Chr2	stalkie_big_nohaplotig	exon	105149527	105149684	100	+	.	Parent=FBgn0038038.2.mrna1;Target=FBgn0038038.2 104 261 +
Chr2	stalkie_big_nohaplotig	exon	105149749	105149874	99	+	.	Parent=FBgn0038038.2.mrna1;Target=FBgn0038038.2 262 387 +
Chr2	stalkie_big_nohaplotig	exon	105155372	105155606	100	+	.	Parent=FBgn0038038.2.mrna1;Target=FBgn0038038.2 388 622 +
Chr2	stalkie_big_nohaplotig	exon	105155675	105155864	100	+	.	Parent=FBgn0038038.2.mrna1;Target=FBgn0038038.2 623 812 +
Chr2	stalkie_big_nohaplotig	exon	105155919	105156065	100	+	.	Parent=FBgn0038038.2.mrna1;Target=FBgn0038038.2 813 959 +
Chr2	stalkie_big_nohaplotig	exon	105156130	105156501	99	+	.	Parent=FBgn0038038.2.mrna1;Target=FBgn0038038.2 960 1331 +
Chr2	stalkie_big_nohaplotig	exon	105156565	105156661	100	+	.	Parent=FBgn0038038.2.mrna1;Target=FBgn0038038.2 1332 1428 +
Chr2	stalkie_big_nohaplotig	CDS	105138581	105138635	.	+	0	Parent=FBgn0038038.2.mrna1;Target=FBgn0038038.2 1 55 +
Chr2	stalkie_big_nohaplotig	CDS	105139510	105139536	.	+	2	Parent=FBgn0038038.2.mrna1;Target=FBgn0038038.2 56 82 +
Chr2	stalkie_big_nohaplotig	CDS	105139600	105139620	.	+	2	Parent=FBgn0038038.2.mrna1;Target=FBgn0038038.2 83 103 +
Chr2	stalkie_big_nohaplotig	CDS	105149527	105149684	.	+	2	Parent=FBgn0038038.2.mrna1;Target=FBgn0038038.2 104 261 +
Chr2	stalkie_big_nohaplotig	CDS	105149749	105149874	.	+	0	Parent=FBgn0038038.2.mrna1;Target=FBgn0038038.2 262 387 +
Chr2	stalkie_big_nohaplotig	CDS	105155372	105155606	.	+	0	Parent=FBgn0038038.2.mrna1;Target=FBgn0038038.2 388 622 +
Chr2	stalkie_big_nohaplotig	CDS	105155675	105155864	.	+	2	Parent=FBgn0038038.2.mrna1;Target=FBgn0038038.2 623 812 +
Chr2	stalkie_big_nohaplotig	CDS	105155919	105156065	.	+	1	Parent=FBgn0038038.2.mrna1;Target=FBgn0038038.2 813 959 +
Chr2	stalkie_big_nohaplotig	CDS	105156130	105156501	.	+	1	Parent=FBgn0038038.2.mrna1;Target=FBgn0038038.2 960 1331 +
Chr2	stalkie_big_nohaplotig	CDS	105156565	105156661	.	+	1	Parent=FBgn0038038.2.mrna1;Target=FBgn0038038.2 1332 1428 +
Chr2	gffcl	locus	105146606	105153447	.	-	.	ID=RLOC_00020206;geneIDs=FBgn0039296.1.path1;transcripts=FBgn0039296.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105146606	105153447	.	-	.	ID=FBgn0039296.1.mrna1;geneID=FBgn0039296.1.path1;Name=FBgn0039296.1;Dir=sensecoverage=100.0;identity=98.9;matches=1326;mismatches=15;indels=0;unknowns=0;locus=RLOC_00020206
Chr2	stalkie_big_nohaplotig	exon	105146606	105147807	98	-	.	Parent=FBgn0039296.1.mrna1;Target=FBgn0039296.1 140 1341 +
Chr2	stalkie_big_nohaplotig	exon	105153309	105153447	99	-	.	Parent=FBgn0039296.1.mrna1;Target=FBgn0039296.1 1 139 +
Chr2	stalkie_big_nohaplotig	CDS	105146606	105147807	.	-	2	Parent=FBgn0039296.1.mrna1;Target=FBgn0039296.1 140 1341 +
Chr2	stalkie_big_nohaplotig	CDS	105153309	105153447	.	-	0	Parent=FBgn0039296.1.mrna1;Target=FBgn0039296.1 1 139 +
Chr2	gffcl	locus	105158585	105159049	.	+	.	ID=RLOC_00020207;geneIDs=FBgn0037637.1.path1;transcripts=FBgn0037637.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105158585	105159049	.	+	.	ID=FBgn0037637.1.mrna1;geneID=FBgn0037637.1.path1;Name=FBgn0037637.1;Dir=sensecoverage=100.0;identity=100.0;matches=294;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020207
Chr2	stalkie_big_nohaplotig	exon	105158585	105158740	100	+	.	Parent=FBgn0037637.1.mrna1;Target=FBgn0037637.1 1 156 +
Chr2	stalkie_big_nohaplotig	exon	105158912	105159049	100	+	.	Parent=FBgn0037637.1.mrna1;Target=FBgn0037637.1 157 294 +
Chr2	stalkie_big_nohaplotig	CDS	105158585	105158740	.	+	0	Parent=FBgn0037637.1.mrna1;Target=FBgn0037637.1 1 156 +
Chr2	stalkie_big_nohaplotig	CDS	105158912	105159049	.	+	0	Parent=FBgn0037637.1.mrna1;Target=FBgn0037637.1 157 294 +
Chr2	gffcl	locus	105159405	105159834	.	+	.	ID=RLOC_00020208;geneIDs=comp150571_c0_seq1.path1;transcripts=comp150571_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105159405	105159834	.	+	.	ID=comp150571_c0_seq1.mrna1;geneID=comp150571_c0_seq1.path1;Name=comp150571_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.4;matches=406;mismatches=6;indels=18;unknowns=0;Target=comp150571_c0_seq1 412 1 .;CDS_Target=comp150571_c0_seq1 289 125 .;locus=RLOC_00020208
Chr2	stalkie_big_nohaplotig	exon	105159405	105159834	94	+	.	Parent=comp150571_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105159529	105159711	.	+	0	Parent=comp150571_c0_seq1.mrna1
Chr2	gffcl	locus	105162207	105166814	.	-	.	ID=RLOC_00020209;geneIDs=FBgn0040532.1.path1;transcripts=FBgn0040532.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105162207	105166814	.	-	.	ID=FBgn0040532.1.mrna1;geneID=FBgn0040532.1.path1;Name=FBgn0040532.1;Dir=sensecoverage=100.0;identity=100.0;matches=312;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020209
Chr2	stalkie_big_nohaplotig	exon	105162207	105162262	100	-	.	Parent=FBgn0040532.1.mrna1;Target=FBgn0040532.1 257 312 +
Chr2	stalkie_big_nohaplotig	exon	105162330	105162524	100	-	.	Parent=FBgn0040532.1.mrna1;Target=FBgn0040532.1 62 256 +
Chr2	stalkie_big_nohaplotig	exon	105166754	105166814	100	-	.	Parent=FBgn0040532.1.mrna1;Target=FBgn0040532.1 1 61 +
Chr2	stalkie_big_nohaplotig	CDS	105162207	105162262	.	-	2	Parent=FBgn0040532.1.mrna1;Target=FBgn0040532.1 257 312 +
Chr2	stalkie_big_nohaplotig	CDS	105162330	105162524	.	-	2	Parent=FBgn0040532.1.mrna1;Target=FBgn0040532.1 62 256 +
Chr2	stalkie_big_nohaplotig	CDS	105166754	105166814	.	-	0	Parent=FBgn0040532.1.mrna1;Target=FBgn0040532.1 1 61 +
Chr2	gffcl	locus	105162697	105163615	.	+	.	ID=RLOC_00020210;geneIDs=comp149709_c0_seq1.path1;transcripts=comp149709_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105162697	105163615	.	+	.	ID=comp149709_c0_seq1.mrna1;geneID=comp149709_c0_seq1.path1;Name=comp149709_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=915;mismatches=4;indels=2;unknowns=0;Target=comp149709_c0_seq1 921 1 .;CDS_Target=comp149709_c0_seq1 877 746 .;locus=RLOC_00020210
Chr2	stalkie_big_nohaplotig	exon	105162697	105163615	99	+	.	Parent=comp149709_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105163442	105163571	.	+	0	Parent=comp149709_c0_seq1.mrna1
Chr2	gffcl	locus	105172231	105175715	.	+	.	ID=RLOC_00020211;geneIDs=FBgn0037638.1.path1;transcripts=FBgn0037638.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105172231	105175715	.	+	.	ID=FBgn0037638.1.mrna1;geneID=FBgn0037638.1.path1;Name=FBgn0037638.1;Dir=sensecoverage=100.0;identity=99.8;matches=2204;mismatches=4;indels=0;unknowns=0;locus=RLOC_00020211
Chr2	stalkie_big_nohaplotig	exon	105172231	105172642	99	+	.	Parent=FBgn0037638.1.mrna1;Target=FBgn0037638.1 1 412 +
Chr2	stalkie_big_nohaplotig	exon	105172713	105172886	100	+	.	Parent=FBgn0037638.1.mrna1;Target=FBgn0037638.1 413 586 +
Chr2	stalkie_big_nohaplotig	exon	105172953	105173232	100	+	.	Parent=FBgn0037638.1.mrna1;Target=FBgn0037638.1 587 866 +
Chr2	stalkie_big_nohaplotig	exon	105173294	105173668	100	+	.	Parent=FBgn0037638.1.mrna1;Target=FBgn0037638.1 867 1241 +
Chr2	stalkie_big_nohaplotig	exon	105173856	105174309	100	+	.	Parent=FBgn0037638.1.mrna1;Target=FBgn0037638.1 1242 1695 +
Chr2	stalkie_big_nohaplotig	exon	105175102	105175228	99	+	.	Parent=FBgn0037638.1.mrna1;Target=FBgn0037638.1 1696 1822 +
Chr2	stalkie_big_nohaplotig	exon	105175330	105175715	99	+	.	Parent=FBgn0037638.1.mrna1;Target=FBgn0037638.1 1823 2208 +
Chr2	stalkie_big_nohaplotig	CDS	105172231	105172642	.	+	0	Parent=FBgn0037638.1.mrna1;Target=FBgn0037638.1 1 412 +
Chr2	stalkie_big_nohaplotig	CDS	105172713	105172886	.	+	2	Parent=FBgn0037638.1.mrna1;Target=FBgn0037638.1 413 586 +
Chr2	stalkie_big_nohaplotig	CDS	105172953	105173232	.	+	2	Parent=FBgn0037638.1.mrna1;Target=FBgn0037638.1 587 866 +
Chr2	stalkie_big_nohaplotig	CDS	105173294	105173668	.	+	1	Parent=FBgn0037638.1.mrna1;Target=FBgn0037638.1 867 1241 +
Chr2	stalkie_big_nohaplotig	CDS	105173856	105174309	.	+	1	Parent=FBgn0037638.1.mrna1;Target=FBgn0037638.1 1242 1695 +
Chr2	stalkie_big_nohaplotig	CDS	105175102	105175228	.	+	0	Parent=FBgn0037638.1.mrna1;Target=FBgn0037638.1 1696 1822 +
Chr2	stalkie_big_nohaplotig	CDS	105175330	105175715	.	+	2	Parent=FBgn0037638.1.mrna1;Target=FBgn0037638.1 1823 2208 +
Chr2	gffcl	locus	105176292	105176638	.	-	.	ID=RLOC_00020212;geneIDs=comp147079_c0_seq1.path1;transcripts=comp147079_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105176292	105176638	.	-	.	ID=comp147079_c0_seq1.mrna1;geneID=comp147079_c0_seq1.path1;Name=comp147079_c0_seq1;Dir=indeterminatecoverage=98.0;identity=98.6;matches=343;mismatches=2;indels=3;unknowns=0;Target=comp147079_c0_seq1 353 8 .;CDS_Target=comp147079_c0_seq1 264 181 .;locus=RLOC_00020212
Chr2	stalkie_big_nohaplotig	exon	105176292	105176638	98	-	.	Parent=comp147079_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105176381	105176466	.	-	0	Parent=comp147079_c0_seq1.mrna1
Chr2	gffcl	locus	105181401	105197353	.	-	.	ID=RLOC_00020213;geneIDs=comp159021_c2_seq1.path2,comp163281_c1_seq1.path1;transcripts=comp163281_c1_seq1.mrna1,comp159021_c2_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	105181401	105197353	.	-	.	ID=comp163281_c1_seq1.mrna1;geneID=comp163281_c1_seq1.path1;Name=comp163281_c1_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=5625;mismatches=10;indels=1;unknowns=0;locus=RLOC_00020213
Chr2	stalkie_big_nohaplotig	exon	105181401	105182448	99	-	.	Parent=comp163281_c1_seq1.mrna1;Target=comp163281_c1_seq1 4588 5636 +
Chr2	stalkie_big_nohaplotig	exon	105185314	105187514	99	-	.	Parent=comp163281_c1_seq1.mrna1;Target=comp163281_c1_seq1 2387 4587 +
Chr2	stalkie_big_nohaplotig	exon	105189649	105189778	100	-	.	Parent=comp163281_c1_seq1.mrna1;Target=comp163281_c1_seq1 2257 2386 +
Chr2	stalkie_big_nohaplotig	exon	105190976	105191237	100	-	.	Parent=comp163281_c1_seq1.mrna1;Target=comp163281_c1_seq1 1995 2256 +
Chr2	stalkie_big_nohaplotig	exon	105191299	105191521	99	-	.	Parent=comp163281_c1_seq1.mrna1;Target=comp163281_c1_seq1 1772 1994 +
Chr2	stalkie_big_nohaplotig	exon	105192451	105192550	100	-	.	Parent=comp163281_c1_seq1.mrna1;Target=comp163281_c1_seq1 1672 1771 +
Chr2	stalkie_big_nohaplotig	exon	105192931	105193088	100	-	.	Parent=comp163281_c1_seq1.mrna1;Target=comp163281_c1_seq1 1514 1671 +
Chr2	stalkie_big_nohaplotig	exon	105193212	105193804	99	-	.	Parent=comp163281_c1_seq1.mrna1;Target=comp163281_c1_seq1 921 1513 +
Chr2	stalkie_big_nohaplotig	exon	105196434	105197353	100	-	.	Parent=comp163281_c1_seq1.mrna1;Target=comp163281_c1_seq1 1 920 +
Chr2	stalkie_big_nohaplotig	CDS	105182286	105182448	.	-	2	Parent=comp163281_c1_seq1.mrna1;Target=comp163281_c1_seq1 4588 4751 +
Chr2	stalkie_big_nohaplotig	CDS	105185314	105187514	.	-	1	Parent=comp163281_c1_seq1.mrna1;Target=comp163281_c1_seq1 2387 4587 +
Chr2	stalkie_big_nohaplotig	CDS	105189649	105189778	.	-	2	Parent=comp163281_c1_seq1.mrna1;Target=comp163281_c1_seq1 2257 2386 +
Chr2	stalkie_big_nohaplotig	CDS	105190976	105191237	.	-	0	Parent=comp163281_c1_seq1.mrna1;Target=comp163281_c1_seq1 1995 2256 +
Chr2	stalkie_big_nohaplotig	CDS	105191299	105191521	.	-	1	Parent=comp163281_c1_seq1.mrna1;Target=comp163281_c1_seq1 1772 1994 +
Chr2	stalkie_big_nohaplotig	CDS	105192451	105192550	.	-	2	Parent=comp163281_c1_seq1.mrna1;Target=comp163281_c1_seq1 1672 1771 +
Chr2	stalkie_big_nohaplotig	CDS	105192931	105193088	.	-	1	Parent=comp163281_c1_seq1.mrna1;Target=comp163281_c1_seq1 1514 1671 +
Chr2	stalkie_big_nohaplotig	CDS	105193212	105193804	.	-	0	Parent=comp163281_c1_seq1.mrna1;Target=comp163281_c1_seq1 921 1513 +
Chr2	stalkie_big_nohaplotig	CDS	105196434	105196631	.	-	0	Parent=comp163281_c1_seq1.mrna1;Target=comp163281_c1_seq1 723 920 +
Chr2	stalkie_big_nohaplotig	mRNA	105187493	105187554	.	-	.	ID=comp159021_c2_seq1.mrna2;geneID=comp159021_c2_seq1.path2;Name=comp159021_c2_seq1;Dir=indeterminatecoverage=3.2;identity=100.0;matches=62;mismatches=0;indels=0;unknowns=0;Target=comp159021_c2_seq1 1934 1873 .;locus=RLOC_00020213
Chr2	stalkie_big_nohaplotig	exon	105187493	105187554	100	-	.	Parent=comp159021_c2_seq1.mrna2
Chr2	gffcl	locus	105182586	105183640	.	+	.	ID=RLOC_00020214;geneIDs=comp158888_c0_seq1.path1;transcripts=comp158888_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105182586	105183640	.	+	.	ID=comp158888_c0_seq1.mrna1;geneID=comp158888_c0_seq1.path1;Name=comp158888_c0_seq1;Dir=indeterminatecoverage=99.4;identity=98.3;matches=1038;mismatches=1;indels=17;unknowns=0;Target=comp158888_c0_seq1 1046 7 .;CDS_Target=comp158888_c0_seq1 74 9 .;locus=RLOC_00020214
Chr2	stalkie_big_nohaplotig	exon	105182586	105183640	98	+	.	Parent=comp158888_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105182588	105182653	.	+	0	Parent=comp158888_c0_seq1.mrna1
Chr2	gffcl	locus	105183759	105184597	.	+	.	ID=RLOC_00020215;geneIDs=comp151884_c0_seq1.path1;transcripts=comp151884_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105183759	105184597	.	+	.	ID=comp151884_c0_seq1.mrna1;geneID=comp151884_c0_seq1.path1;Name=comp151884_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=826;mismatches=8;indels=16;unknowns=0;Target=comp151884_c0_seq1 845 1 .;CDS_Target=comp151884_c0_seq1 332 156 .;locus=RLOC_00020215
Chr2	stalkie_big_nohaplotig	exon	105183759	105184597	97	+	.	Parent=comp151884_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105183919	105184088	.	+	0	Parent=comp151884_c0_seq1.mrna1
Chr2	gffcl	locus	105194095	105195091	.	-	.	ID=RLOC_00020216;geneIDs=comp150221_c0_seq1.path1;transcripts=comp150221_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105194095	105195091	.	-	.	ID=comp150221_c0_seq1.mrna1;geneID=comp150221_c0_seq1.path1;Name=comp150221_c0_seq1;Dir=indeterminatecoverage=99.9;identity=95.8;matches=968;mismatches=19;indels=23;unknowns=0;Target=comp150221_c0_seq1 1000 1 .;CDS_Target=comp150221_c0_seq1 196 41 .;locus=RLOC_00020216
Chr2	stalkie_big_nohaplotig	exon	105194095	105195091	95	-	.	Parent=comp150221_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105194896	105195051	.	-	0	Parent=comp150221_c0_seq1.mrna1
Chr2	gffcl	locus	105198754	105401436	.	-	.	ID=RLOC_00020217;geneIDs=FBgn0262614.1.path1,comp161954_c0_seq1.path1;transcripts=comp161954_c0_seq1.mrna1,FBgn0262614.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105198754	105280150	.	-	.	ID=comp161954_c0_seq1.mrna1;geneID=comp161954_c0_seq1.path1;Name=comp161954_c0_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=6021;mismatches=17;indels=39;unknowns=0;locus=RLOC_00020217
Chr2	stalkie_big_nohaplotig	exon	105198754	105200737	97	-	.	Parent=comp161954_c0_seq1.mrna1;Target=comp161954_c0_seq1 1 2016 -
Chr2	stalkie_big_nohaplotig	exon	105201336	105201924	100	-	.	Parent=comp161954_c0_seq1.mrna1;Target=comp161954_c0_seq1 2017 2605 -
Chr2	stalkie_big_nohaplotig	exon	105202031	105203581	99	-	.	Parent=comp161954_c0_seq1.mrna1;Target=comp161954_c0_seq1 2606 4157 -
Chr2	stalkie_big_nohaplotig	exon	105208894	105209063	100	-	.	Parent=comp161954_c0_seq1.mrna1;Target=comp161954_c0_seq1 4158 4327 -
Chr2	stalkie_big_nohaplotig	exon	105269437	105269956	99	-	.	Parent=comp161954_c0_seq1.mrna1;Target=comp161954_c0_seq1 4328 4847 -
Chr2	stalkie_big_nohaplotig	exon	105270125	105270726	99	-	.	Parent=comp161954_c0_seq1.mrna1;Target=comp161954_c0_seq1 4848 5449 -
Chr2	stalkie_big_nohaplotig	exon	105279526	105280150	99	-	.	Parent=comp161954_c0_seq1.mrna1;Target=comp161954_c0_seq1 5450 6074 -
Chr2	stalkie_big_nohaplotig	CDS	105202061	105203581	.	-	1	Parent=comp161954_c0_seq1.mrna1;Target=comp161954_c0_seq1 2636 4157 .
Chr2	stalkie_big_nohaplotig	CDS	105208894	105209063	.	-	0	Parent=comp161954_c0_seq1.mrna1;Target=comp161954_c0_seq1 4158 4327 .
Chr2	stalkie_big_nohaplotig	CDS	105269437	105269956	.	-	1	Parent=comp161954_c0_seq1.mrna1;Target=comp161954_c0_seq1 4328 4847 .
Chr2	stalkie_big_nohaplotig	CDS	105270125	105270531	.	-	0	Parent=comp161954_c0_seq1.mrna1;Target=comp161954_c0_seq1 4848 5254 .
Chr2	stalkie_big_nohaplotig	mRNA	105199592	105401436	.	-	.	ID=FBgn0262614.1.mrna1;geneID=FBgn0262614.1.path1;Name=FBgn0262614.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=4653;mismatches=12;indels=6;unknowns=0;locus=RLOC_00020217
Chr2	stalkie_big_nohaplotig	exon	105199592	105200737	99	-	.	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 4680 3538 .
Chr2	stalkie_big_nohaplotig	exon	105201336	105201924	100	-	.	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 3537 2949 .
Chr2	stalkie_big_nohaplotig	exon	105202031	105203581	99	-	.	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 2948 1398 .
Chr2	stalkie_big_nohaplotig	exon	105208894	105209063	100	-	.	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 1397 1228 .
Chr2	stalkie_big_nohaplotig	exon	105269437	105269956	99	-	.	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 1227 708 .
Chr2	stalkie_big_nohaplotig	exon	105307241	105307246	100	-	.	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 707 702 .
Chr2	stalkie_big_nohaplotig	exon	105328315	105328320	100	-	.	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 688 683 .
Chr2	stalkie_big_nohaplotig	exon	105339365	105339368	100	-	.	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 682 679 .
Chr2	stalkie_big_nohaplotig	exon	105345678	105345680	100	-	.	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 678 676 .
Chr2	stalkie_big_nohaplotig	exon	105347768	105347776	100	-	.	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 675 667 .
Chr2	stalkie_big_nohaplotig	exon	105349197	105349201	100	-	.	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 666 662 .
Chr2	stalkie_big_nohaplotig	exon	105365525	105365534	76	-	.	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 661 649 .
Chr2	stalkie_big_nohaplotig	exon	105380326	105380330	100	-	.	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 648 644 .
Chr2	stalkie_big_nohaplotig	exon	105388053	105388058	100	-	.	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 643 638 .
Chr2	stalkie_big_nohaplotig	exon	105400800	105401436	99	-	.	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 637 1 .
Chr2	stalkie_big_nohaplotig	CDS	105199592	105200737	.	-	1	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 4680 3538 .
Chr2	stalkie_big_nohaplotig	CDS	105201336	105201924	.	-	2	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 3537 2949 .
Chr2	stalkie_big_nohaplotig	CDS	105202031	105203581	.	-	2	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 2948 1398 .
Chr2	stalkie_big_nohaplotig	CDS	105208894	105209063	.	-	1	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 1397 1228 .
Chr2	stalkie_big_nohaplotig	CDS	105269437	105269956	.	-	2	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 1227 708 .
Chr2	stalkie_big_nohaplotig	CDS	105307241	105307246	.	-	2	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 707 702 .
Chr2	stalkie_big_nohaplotig	CDS	105328315	105328320	.	-	2	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 688 683 .
Chr2	stalkie_big_nohaplotig	CDS	105339365	105339368	.	-	0	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 682 679 .
Chr2	stalkie_big_nohaplotig	CDS	105345678	105345680	.	-	0	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 678 676 .
Chr2	stalkie_big_nohaplotig	CDS	105347768	105347776	.	-	0	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 675 667 .
Chr2	stalkie_big_nohaplotig	CDS	105349197	105349201	.	-	2	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 666 662 .
Chr2	stalkie_big_nohaplotig	CDS	105365525	105365534	.	-	0	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 661 649 .
Chr2	stalkie_big_nohaplotig	CDS	105380326	105380330	.	-	2	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 648 644 .
Chr2	stalkie_big_nohaplotig	CDS	105388053	105388058	.	-	2	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 643 638 .
Chr2	stalkie_big_nohaplotig	CDS	105400800	105401436	.	-	0	Parent=FBgn0262614.1.mrna1;Target=FBgn0262614.1 637 1 .
Chr2	gffcl	locus	105223509	105225884	.	+	.	ID=RLOC_00020218;geneIDs=Dp_FBgn0250410.1.path1;transcripts=Dp_FBgn0250410.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105223509	105225884	.	+	.	ID=Dp_FBgn0250410.1.mrna1;geneID=Dp_FBgn0250410.1.path1;Name=Dp_FBgn0250410.1;Dir=sensecoverage=100.0;identity=97.1;matches=807;mismatches=24;indels=0;unknowns=0;locus=RLOC_00020218
Chr2	stalkie_big_nohaplotig	exon	105223509	105224263	96	+	.	Parent=Dp_FBgn0250410.1.mrna1;Target=Dp_FBgn0250410.1 1 755 +
Chr2	stalkie_big_nohaplotig	exon	105225809	105225884	100	+	.	Parent=Dp_FBgn0250410.1.mrna1;Target=Dp_FBgn0250410.1 756 831 +
Chr2	stalkie_big_nohaplotig	CDS	105223509	105224263	.	+	0	Parent=Dp_FBgn0250410.1.mrna1;Target=Dp_FBgn0250410.1 1 755 +
Chr2	stalkie_big_nohaplotig	CDS	105225809	105225884	.	+	1	Parent=Dp_FBgn0250410.1.mrna1;Target=Dp_FBgn0250410.1 756 831 +
Chr2	gffcl	locus	105230013	105230943	.	+	.	ID=RLOC_00020219;geneIDs=comp151286_c0_seq1.path1;transcripts=comp151286_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105230013	105230943	.	+	.	ID=comp151286_c0_seq1.mrna1;geneID=comp151286_c0_seq1.path1;Name=comp151286_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=931;mismatches=0;indels=0;unknowns=0;Target=comp151286_c0_seq1 931 1 .;CDS_Target=comp151286_c0_seq1 198 70 .;locus=RLOC_00020219
Chr2	stalkie_big_nohaplotig	exon	105230013	105230943	100	+	.	Parent=comp151286_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105230082	105230210	.	+	0	Parent=comp151286_c0_seq1.mrna1
Chr2	gffcl	locus	105242632	105243538	.	+	.	ID=RLOC_00020220;geneIDs=comp154561_c0_seq1.path1;transcripts=comp154561_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105242632	105243538	.	+	.	ID=comp154561_c0_seq1.mrna1;geneID=comp154561_c0_seq1.path1;Name=comp154561_c0_seq1;Dir=indeterminatecoverage=96.7;identity=99.1;matches=899;mismatches=8;indels=0;unknowns=0;Target=comp154561_c0_seq1 938 32 .;CDS_Target=comp154561_c0_seq1 649 272 .;locus=RLOC_00020220
Chr2	stalkie_big_nohaplotig	exon	105242632	105243538	99	+	.	Parent=comp154561_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105242872	105243249	.	+	0	Parent=comp154561_c0_seq1.mrna1
Chr2	gffcl	locus	105254030	105254304	.	-	.	ID=RLOC_00020221;geneIDs=comp116966_c0_seq1.path1;transcripts=comp116966_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105254030	105254304	.	-	.	ID=comp116966_c0_seq1.mrna1;geneID=comp116966_c0_seq1.path1;Name=comp116966_c0_seq1;Dir=indeterminatecoverage=91.1;identity=100.0;matches=275;mismatches=0;indels=0;unknowns=0;Target=comp116966_c0_seq1 279 5 .;CDS_Target=comp116966_c0_seq1 171 7 .;locus=RLOC_00020221
Chr2	stalkie_big_nohaplotig	exon	105254030	105254304	100	-	.	Parent=comp116966_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105254138	105254302	.	-	0	Parent=comp116966_c0_seq1.mrna1
Chr2	gffcl	locus	105254697	105255113	.	+	.	ID=RLOC_00020222;geneIDs=comp88736_c0_seq1.path1,comp88736_c0_seq1.path2;transcripts=comp88736_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105254697	105255113	.	+	.	ID=comp88736_c0_seq1.mrna1;geneID=comp88736_c0_seq1.path1;Name=comp88736_c0_seq1;Dir=indeterminatecoverage=73.8;identity=99.5;matches=415;mismatches=2;indels=0;unknowns=0;Target=comp88736_c0_seq1 417 1 .;CDS_Target=comp88736_c0_seq1 103 32 .;locus=RLOC_00020222
Chr2	stalkie_big_nohaplotig	exon	105254697	105255113	99	+	.	Parent=comp88736_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105254728	105254799	.	+	0	Parent=comp88736_c0_seq1.mrna1
Chr2	gffcl	locus	105369689	105370155	.	+	.	ID=RLOC_00020223;geneIDs=comp151985_c0_seq1.path1;transcripts=comp151985_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105369689	105370155	.	+	.	ID=comp151985_c0_seq1.mrna1;geneID=comp151985_c0_seq1.path1;Name=comp151985_c0_seq1;Dir=indeterminatecoverage=95.3;identity=99.1;matches=463;mismatches=4;indels=0;unknowns=0;Target=comp151985_c0_seq1 467 1 .;CDS_Target=comp151985_c0_seq1 329 3 .;locus=RLOC_00020223
Chr2	stalkie_big_nohaplotig	exon	105369689	105370155	99	+	.	Parent=comp151985_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105369691	105370017	.	+	0	Parent=comp151985_c0_seq1.mrna1
Chr2	gffcl	locus	105413865	105418501	.	+	.	ID=RLOC_00020224;geneIDs=FBgn0003015.1.path1;transcripts=FBgn0003015.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105413865	105418501	.	+	.	ID=FBgn0003015.1.mrna1;geneID=FBgn0003015.1.path1;Name=FBgn0003015.1;Dir=sensecoverage=100.0;identity=99.2;matches=1798;mismatches=14;indels=0;unknowns=0;locus=RLOC_00020224
Chr2	stalkie_big_nohaplotig	exon	105413865	105414405	99	+	.	Parent=FBgn0003015.1.mrna1;Target=FBgn0003015.1 1 541 +
Chr2	stalkie_big_nohaplotig	exon	105414472	105414970	98	+	.	Parent=FBgn0003015.1.mrna1;Target=FBgn0003015.1 542 1040 +
Chr2	stalkie_big_nohaplotig	exon	105415887	105416179	100	+	.	Parent=FBgn0003015.1.mrna1;Target=FBgn0003015.1 1041 1333 +
Chr2	stalkie_big_nohaplotig	exon	105416968	105417346	98	+	.	Parent=FBgn0003015.1.mrna1;Target=FBgn0003015.1 1334 1712 +
Chr2	stalkie_big_nohaplotig	exon	105418402	105418501	99	+	.	Parent=FBgn0003015.1.mrna1;Target=FBgn0003015.1 1713 1812 +
Chr2	stalkie_big_nohaplotig	CDS	105413865	105414405	.	+	0	Parent=FBgn0003015.1.mrna1;Target=FBgn0003015.1 1 541 +
Chr2	stalkie_big_nohaplotig	CDS	105414472	105414970	.	+	2	Parent=FBgn0003015.1.mrna1;Target=FBgn0003015.1 542 1040 +
Chr2	stalkie_big_nohaplotig	CDS	105415887	105416179	.	+	1	Parent=FBgn0003015.1.mrna1;Target=FBgn0003015.1 1041 1333 +
Chr2	stalkie_big_nohaplotig	CDS	105416968	105417346	.	+	2	Parent=FBgn0003015.1.mrna1;Target=FBgn0003015.1 1334 1712 +
Chr2	stalkie_big_nohaplotig	CDS	105418402	105418501	.	+	1	Parent=FBgn0003015.1.mrna1;Target=FBgn0003015.1 1713 1812 +
Chr2	gffcl	locus	105422687	105422813	.	-	.	ID=RLOC_00020225;geneIDs=comp151299_c0_seq1.path1;transcripts=comp151299_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105422687	105422813	.	-	.	ID=comp151299_c0_seq1.mrna1;geneID=comp151299_c0_seq1.path1;Name=comp151299_c0_seq1;Dir=indeterminatecoverage=27.0;identity=100.0;matches=127;mismatches=0;indels=0;unknowns=0;Target=comp151299_c0_seq1 127 1 .;locus=RLOC_00020225
Chr2	stalkie_big_nohaplotig	exon	105422687	105422813	100	-	.	Parent=comp151299_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105422687	105422813	.	-	0	Parent=comp151299_c0_seq1.mrna1
Chr2	gffcl	locus	105423913	105431489	.	.	.	ID=RLOC_00020226;geneIDs=FBgn0037643.1.path1,comp145980_c0_seq1.path1;transcripts=FBgn0037643.1.mrna1,comp145980_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105423913	105431489	.	+	.	ID=FBgn0037643.1.mrna1;geneID=FBgn0037643.1.path1;Name=FBgn0037643.1;Dir=sensecoverage=100.0;identity=99.9;matches=1373;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020226
Chr2	stalkie_big_nohaplotig	exon	105423913	105424005	100	+	.	Parent=FBgn0037643.1.mrna1;Target=FBgn0037643.1 1 93 +
Chr2	stalkie_big_nohaplotig	exon	105424593	105424696	100	+	.	Parent=FBgn0037643.1.mrna1;Target=FBgn0037643.1 94 197 +
Chr2	stalkie_big_nohaplotig	exon	105429125	105429277	100	+	.	Parent=FBgn0037643.1.mrna1;Target=FBgn0037643.1 198 350 +
Chr2	stalkie_big_nohaplotig	exon	105429789	105429951	100	+	.	Parent=FBgn0037643.1.mrna1;Target=FBgn0037643.1 351 513 +
Chr2	stalkie_big_nohaplotig	exon	105430021	105430285	99	+	.	Parent=FBgn0037643.1.mrna1;Target=FBgn0037643.1 514 778 +
Chr2	stalkie_big_nohaplotig	exon	105430822	105431246	100	+	.	Parent=FBgn0037643.1.mrna1;Target=FBgn0037643.1 779 1203 +
Chr2	stalkie_big_nohaplotig	exon	105431319	105431489	100	+	.	Parent=FBgn0037643.1.mrna1;Target=FBgn0037643.1 1204 1374 +
Chr2	stalkie_big_nohaplotig	CDS	105423913	105424005	.	+	0	Parent=FBgn0037643.1.mrna1;Target=FBgn0037643.1 1 93 +
Chr2	stalkie_big_nohaplotig	CDS	105424593	105424696	.	+	0	Parent=FBgn0037643.1.mrna1;Target=FBgn0037643.1 94 197 +
Chr2	stalkie_big_nohaplotig	CDS	105429125	105429277	.	+	1	Parent=FBgn0037643.1.mrna1;Target=FBgn0037643.1 198 350 +
Chr2	stalkie_big_nohaplotig	CDS	105429789	105429951	.	+	1	Parent=FBgn0037643.1.mrna1;Target=FBgn0037643.1 351 513 +
Chr2	stalkie_big_nohaplotig	CDS	105430021	105430285	.	+	0	Parent=FBgn0037643.1.mrna1;Target=FBgn0037643.1 514 778 +
Chr2	stalkie_big_nohaplotig	CDS	105430822	105431246	.	+	2	Parent=FBgn0037643.1.mrna1;Target=FBgn0037643.1 779 1203 +
Chr2	stalkie_big_nohaplotig	CDS	105431319	105431489	.	+	0	Parent=FBgn0037643.1.mrna1;Target=FBgn0037643.1 1204 1374 +
Chr2	stalkie_big_nohaplotig	mRNA	105430444	105430844	.	-	.	ID=comp145980_c0_seq1.mrna1;geneID=comp145980_c0_seq1.path1;Name=comp145980_c0_seq1;Dir=indeterminatecoverage=88.3;identity=99.8;matches=400;mismatches=1;indels=0;unknowns=0;Target=comp145980_c0_seq1 401 1 .;CDS_Target=comp145980_c0_seq1 385 254 .;locus=RLOC_00020226
Chr2	stalkie_big_nohaplotig	exon	105430444	105430844	99	-	.	Parent=comp145980_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105430460	105430591	.	-	0	Parent=comp145980_c0_seq1.mrna1
Chr2	gffcl	locus	105434813	105437946	.	-	.	ID=RLOC_00020227;geneIDs=FBgn0037644.1.path1;transcripts=FBgn0037644.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105434813	105437946	.	-	.	ID=FBgn0037644.1.mrna1;geneID=FBgn0037644.1.path1;Name=FBgn0037644.1;Dir=sensecoverage=100.0;identity=99.6;matches=1712;mismatches=7;indels=0;unknowns=0;locus=RLOC_00020227
Chr2	stalkie_big_nohaplotig	exon	105434813	105434898	100	-	.	Parent=FBgn0037644.1.mrna1;Target=FBgn0037644.1 1634 1719 +
Chr2	stalkie_big_nohaplotig	exon	105434969	105435164	100	-	.	Parent=FBgn0037644.1.mrna1;Target=FBgn0037644.1 1438 1633 +
Chr2	stalkie_big_nohaplotig	exon	105436392	105437257	99	-	.	Parent=FBgn0037644.1.mrna1;Target=FBgn0037644.1 572 1437 +
Chr2	stalkie_big_nohaplotig	exon	105437315	105437846	99	-	.	Parent=FBgn0037644.1.mrna1;Target=FBgn0037644.1 40 571 +
Chr2	stalkie_big_nohaplotig	exon	105437908	105437946	100	-	.	Parent=FBgn0037644.1.mrna1;Target=FBgn0037644.1 1 39 +
Chr2	stalkie_big_nohaplotig	CDS	105434813	105434898	.	-	2	Parent=FBgn0037644.1.mrna1;Target=FBgn0037644.1 1634 1719 +
Chr2	stalkie_big_nohaplotig	CDS	105434969	105435164	.	-	0	Parent=FBgn0037644.1.mrna1;Target=FBgn0037644.1 1438 1633 +
Chr2	stalkie_big_nohaplotig	CDS	105436392	105437257	.	-	2	Parent=FBgn0037644.1.mrna1;Target=FBgn0037644.1 572 1437 +
Chr2	stalkie_big_nohaplotig	CDS	105437315	105437846	.	-	0	Parent=FBgn0037644.1.mrna1;Target=FBgn0037644.1 40 571 +
Chr2	stalkie_big_nohaplotig	CDS	105437908	105437946	.	-	0	Parent=FBgn0037644.1.mrna1;Target=FBgn0037644.1 1 39 +
Chr2	gffcl	locus	105439577	105450119	.	-	.	ID=RLOC_00020228;geneIDs=FBgn0038017.1.path1;transcripts=FBgn0038017.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105439577	105450119	.	-	.	ID=FBgn0038017.1.mrna1;geneID=FBgn0038017.1.path1;Name=FBgn0038017.1;Dir=sensecoverage=100.0;identity=100.0;matches=732;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020228
Chr2	stalkie_big_nohaplotig	exon	105439577	105439936	100	-	.	Parent=FBgn0038017.1.mrna1;Target=FBgn0038017.1 373 732 +
Chr2	stalkie_big_nohaplotig	exon	105446160	105446313	100	-	.	Parent=FBgn0038017.1.mrna1;Target=FBgn0038017.1 219 372 +
Chr2	stalkie_big_nohaplotig	exon	105449902	105450119	100	-	.	Parent=FBgn0038017.1.mrna1;Target=FBgn0038017.1 1 218 +
Chr2	stalkie_big_nohaplotig	CDS	105439577	105439936	.	-	0	Parent=FBgn0038017.1.mrna1;Target=FBgn0038017.1 373 732 +
Chr2	stalkie_big_nohaplotig	CDS	105446160	105446313	.	-	1	Parent=FBgn0038017.1.mrna1;Target=FBgn0038017.1 219 372 +
Chr2	stalkie_big_nohaplotig	CDS	105449902	105450119	.	-	0	Parent=FBgn0038017.1.mrna1;Target=FBgn0038017.1 1 218 +
Chr2	gffcl	locus	105516742	105522711	.	+	.	ID=RLOC_00020230;geneIDs=FBgn0038016.1.path1;transcripts=FBgn0038016.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105516742	105522711	.	+	.	ID=FBgn0038016.1.mrna1;geneID=FBgn0038016.1.path1;Name=FBgn0038016.1;Dir=sensecoverage=100.0;identity=99.9;matches=3496;mismatches=5;indels=0;unknowns=0;locus=RLOC_00020230
Chr2	stalkie_big_nohaplotig	exon	105516742	105517900	99	+	.	Parent=FBgn0038016.1.mrna1;Target=FBgn0038016.1 1 1159 +
Chr2	stalkie_big_nohaplotig	exon	105517958	105518284	100	+	.	Parent=FBgn0038016.1.mrna1;Target=FBgn0038016.1 1160 1486 +
Chr2	stalkie_big_nohaplotig	exon	105518345	105518644	100	+	.	Parent=FBgn0038016.1.mrna1;Target=FBgn0038016.1 1487 1786 +
Chr2	stalkie_big_nohaplotig	exon	105518701	105518833	100	+	.	Parent=FBgn0038016.1.mrna1;Target=FBgn0038016.1 1787 1919 +
Chr2	stalkie_big_nohaplotig	exon	105521070	105522481	99	+	.	Parent=FBgn0038016.1.mrna1;Target=FBgn0038016.1 1920 3331 +
Chr2	stalkie_big_nohaplotig	exon	105522542	105522711	100	+	.	Parent=FBgn0038016.1.mrna1;Target=FBgn0038016.1 3332 3501 +
Chr2	stalkie_big_nohaplotig	CDS	105516742	105517900	.	+	0	Parent=FBgn0038016.1.mrna1;Target=FBgn0038016.1 1 1159 +
Chr2	stalkie_big_nohaplotig	CDS	105517958	105518284	.	+	2	Parent=FBgn0038016.1.mrna1;Target=FBgn0038016.1 1160 1486 +
Chr2	stalkie_big_nohaplotig	CDS	105518345	105518644	.	+	2	Parent=FBgn0038016.1.mrna1;Target=FBgn0038016.1 1487 1786 +
Chr2	stalkie_big_nohaplotig	CDS	105518701	105518833	.	+	2	Parent=FBgn0038016.1.mrna1;Target=FBgn0038016.1 1787 1919 +
Chr2	stalkie_big_nohaplotig	CDS	105521070	105522481	.	+	1	Parent=FBgn0038016.1.mrna1;Target=FBgn0038016.1 1920 3331 +
Chr2	stalkie_big_nohaplotig	CDS	105522542	105522711	.	+	2	Parent=FBgn0038016.1.mrna1;Target=FBgn0038016.1 3332 3501 +
Chr2	gffcl	locus	105552575	105553829	.	+	.	ID=RLOC_00020231;geneIDs=FBgn0038626.1.path1;transcripts=FBgn0038626.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105552575	105553829	.	+	.	ID=FBgn0038626.1.mrna1;geneID=FBgn0038626.1.path1;Name=FBgn0038626.1;Dir=sensecoverage=100.0;identity=99.0;matches=900;mismatches=9;indels=0;unknowns=0;locus=RLOC_00020231
Chr2	stalkie_big_nohaplotig	exon	105552575	105552815	98	+	.	Parent=FBgn0038626.1.mrna1;Target=FBgn0038626.1 1 241 +
Chr2	stalkie_big_nohaplotig	exon	105552882	105553088	100	+	.	Parent=FBgn0038626.1.mrna1;Target=FBgn0038626.1 242 448 +
Chr2	stalkie_big_nohaplotig	exon	105553157	105553469	98	+	.	Parent=FBgn0038626.1.mrna1;Target=FBgn0038626.1 449 761 +
Chr2	stalkie_big_nohaplotig	exon	105553682	105553829	100	+	.	Parent=FBgn0038626.1.mrna1;Target=FBgn0038626.1 762 909 +
Chr2	stalkie_big_nohaplotig	CDS	105552575	105552815	.	+	0	Parent=FBgn0038626.1.mrna1;Target=FBgn0038626.1 1 241 +
Chr2	stalkie_big_nohaplotig	CDS	105552882	105553088	.	+	2	Parent=FBgn0038626.1.mrna1;Target=FBgn0038626.1 242 448 +
Chr2	stalkie_big_nohaplotig	CDS	105553157	105553469	.	+	2	Parent=FBgn0038626.1.mrna1;Target=FBgn0038626.1 449 761 +
Chr2	stalkie_big_nohaplotig	CDS	105553682	105553829	.	+	1	Parent=FBgn0038626.1.mrna1;Target=FBgn0038626.1 762 909 +
Chr2	gffcl	locus	105619326	105619856	.	-	.	ID=RLOC_00020232;geneIDs=comp148037_c0_seq1.path1;transcripts=comp148037_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105619326	105619856	.	-	.	ID=comp148037_c0_seq1.mrna1;geneID=comp148037_c0_seq1.path1;Name=comp148037_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.1;matches=530;mismatches=1;indels=4;unknowns=0;Target=comp148037_c0_seq1 536 2 .;CDS_Target=comp148037_c0_seq1 375 313 .;locus=RLOC_00020232
Chr2	stalkie_big_nohaplotig	exon	105619326	105619856	99	-	.	Parent=comp148037_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105619483	105619545	.	-	0	Parent=comp148037_c0_seq1.mrna1
Chr2	gffcl	locus	105623025	105624179	.	+	.	ID=RLOC_00020233;geneIDs=FBgn0001942.2.path1;transcripts=FBgn0001942.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105623025	105624179	.	+	.	ID=FBgn0001942.2.mrna1;geneID=FBgn0001942.2.path1;Name=FBgn0001942.2;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1153;mismatches=2;indels=0;unknowns=0;Target=FBgn0001942.2 1155 1 .;locus=RLOC_00020233
Chr2	stalkie_big_nohaplotig	exon	105623025	105624179	99	+	.	Parent=FBgn0001942.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105623025	105624179	.	+	0	Parent=FBgn0001942.2.mrna1
Chr2	gffcl	locus	105632594	105633901	.	+	.	ID=RLOC_00020234;geneIDs=comp157968_c0_seq1.path1;transcripts=comp157968_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105632594	105633901	.	+	.	ID=comp157968_c0_seq1.mrna1;geneID=comp157968_c0_seq1.path1;Name=comp157968_c0_seq1;Dir=indeterminatecoverage=96.1;identity=99.5;matches=1303;mismatches=5;indels=2;unknowns=0;Target=comp157968_c0_seq1 1310 1 .;CDS_Target=comp157968_c0_seq1 1128 1054 .;locus=RLOC_00020234
Chr2	stalkie_big_nohaplotig	exon	105632594	105633901	99	+	.	Parent=comp157968_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105633646	105633719	.	+	0	Parent=comp157968_c0_seq1.mrna1
Chr2	gffcl	locus	105642637	105643731	.	+	.	ID=RLOC_00020235;geneIDs=ORF1467.path1;transcripts=ORF1467.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105642637	105643731	.	+	.	ID=ORF1467.mrna1;geneID=ORF1467.path1;Name=ORF1467;Dir=indeterminatecoverage=100.0;identity=98.4;matches=1078;mismatches=17;indels=0;unknowns=0;Target=ORF1467 1095 1 .;locus=RLOC_00020235
Chr2	stalkie_big_nohaplotig	exon	105642637	105643731	98	+	.	Parent=ORF1467.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105642637	105643731	.	+	0	Parent=ORF1467.mrna1
Chr2	gffcl	locus	105654160	105655254	.	-	.	ID=RLOC_00020236;geneIDs=ORF1467.path2;transcripts=ORF1467.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	105654160	105655254	.	-	.	ID=ORF1467.mrna2;geneID=ORF1467.path2;Name=ORF1467;Dir=indeterminatecoverage=100.0;identity=98.4;matches=1078;mismatches=17;indels=0;unknowns=0;Target=ORF1467 1095 1 .;locus=RLOC_00020236
Chr2	stalkie_big_nohaplotig	exon	105654160	105655254	98	-	.	Parent=ORF1467.mrna2
Chr2	stalkie_big_nohaplotig	CDS	105654160	105655254	.	-	0	Parent=ORF1467.mrna2
Chr2	gffcl	locus	105664181	105758387	.	-	.	ID=RLOC_00020237;geneIDs=FBgn0038755.1.path1;transcripts=FBgn0038755.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105664181	105758387	.	-	.	ID=FBgn0038755.1.mrna1;geneID=FBgn0038755.1.path1;Name=FBgn0038755.1;Dir=sensecoverage=90.7;identity=99.8;matches=1298;mismatches=3;indels=0;unknowns=0;locus=RLOC_00020237
Chr2	stalkie_big_nohaplotig	exon	105664181	105664365	100	-	.	Parent=FBgn0038755.1.mrna1;Target=FBgn0038755.1 1117 1301 +
Chr2	stalkie_big_nohaplotig	exon	105664435	105664983	99	-	.	Parent=FBgn0038755.1.mrna1;Target=FBgn0038755.1 568 1116 +
Chr2	stalkie_big_nohaplotig	exon	105668647	105669009	99	-	.	Parent=FBgn0038755.1.mrna1;Target=FBgn0038755.1 205 567 +
Chr2	stalkie_big_nohaplotig	exon	105758184	105758387	100	-	.	Parent=FBgn0038755.1.mrna1;Target=FBgn0038755.1 1 204 +
Chr2	stalkie_big_nohaplotig	CDS	105664183	105664365	.	-	0	Parent=FBgn0038755.1.mrna1;Target=FBgn0038755.1 1117 1299 +
Chr2	stalkie_big_nohaplotig	CDS	105664435	105664983	.	-	0	Parent=FBgn0038755.1.mrna1;Target=FBgn0038755.1 568 1116 +
Chr2	stalkie_big_nohaplotig	CDS	105668647	105669009	.	-	0	Parent=FBgn0038755.1.mrna1;Target=FBgn0038755.1 205 567 +
Chr2	stalkie_big_nohaplotig	CDS	105758184	105758387	.	-	0	Parent=FBgn0038755.1.mrna1;Target=FBgn0038755.1 1 204 +
Chr2	gffcl	locus	105739303	105740123	.	-	.	ID=RLOC_00020238;geneIDs=comp117169_c0_seq1.path1;transcripts=comp117169_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105739303	105740123	.	-	.	ID=comp117169_c0_seq1.mrna1;geneID=comp117169_c0_seq1.path1;Name=comp117169_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.8;matches=819;mismatches=2;indels=0;unknowns=0;Target=comp117169_c0_seq1 821 1 .;CDS_Target=comp117169_c0_seq1 746 630 .;locus=RLOC_00020238
Chr2	stalkie_big_nohaplotig	exon	105739303	105740123	99	-	.	Parent=comp117169_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105739378	105739494	.	-	0	Parent=comp117169_c0_seq1.mrna1
Chr2	gffcl	locus	105776726	105777588	.	-	.	ID=RLOC_00020239;geneIDs=FBgn0010421.1.path1;transcripts=FBgn0010421.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105776726	105777588	.	-	.	ID=FBgn0010421.1.mrna1;geneID=FBgn0010421.1.path1;Name=FBgn0010421.1;Dir=sensecoverage=100.0;identity=94.3;matches=750;mismatches=45;indels=0;unknowns=0;locus=RLOC_00020239
Chr2	stalkie_big_nohaplotig	exon	105776726	105777019	90	-	.	Parent=FBgn0010421.1.mrna1;Target=FBgn0010421.1 502 795 +
Chr2	stalkie_big_nohaplotig	exon	105777088	105777588	96	-	.	Parent=FBgn0010421.1.mrna1;Target=FBgn0010421.1 1 501 +
Chr2	stalkie_big_nohaplotig	CDS	105776726	105777019	.	-	0	Parent=FBgn0010421.1.mrna1;Target=FBgn0010421.1 502 795 +
Chr2	stalkie_big_nohaplotig	CDS	105777088	105777588	.	-	0	Parent=FBgn0010421.1.mrna1;Target=FBgn0010421.1 1 501 +
Chr2	gffcl	locus	105782349	105788046	.	-	.	ID=RLOC_00020240;geneIDs=FBgn0034566.1.path1;transcripts=FBgn0034566.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105782349	105788046	.	-	.	ID=FBgn0034566.1.mrna1;geneID=FBgn0034566.1.path1;Name=FBgn0034566.1;Dir=sensecoverage=100.0;identity=99.9;matches=2295;mismatches=3;indels=0;unknowns=0;locus=RLOC_00020240
Chr2	stalkie_big_nohaplotig	exon	105782349	105782526	100	-	.	Parent=FBgn0034566.1.mrna1;Target=FBgn0034566.1 2121 2298 +
Chr2	stalkie_big_nohaplotig	exon	105782589	105783229	99	-	.	Parent=FBgn0034566.1.mrna1;Target=FBgn0034566.1 1480 2120 +
Chr2	stalkie_big_nohaplotig	exon	105784481	105784590	100	-	.	Parent=FBgn0034566.1.mrna1;Target=FBgn0034566.1 1370 1479 +
Chr2	stalkie_big_nohaplotig	exon	105785212	105785277	100	-	.	Parent=FBgn0034566.1.mrna1;Target=FBgn0034566.1 1304 1369 +
Chr2	stalkie_big_nohaplotig	exon	105785355	105785432	100	-	.	Parent=FBgn0034566.1.mrna1;Target=FBgn0034566.1 1226 1303 +
Chr2	stalkie_big_nohaplotig	exon	105785573	105785984	99	-	.	Parent=FBgn0034566.1.mrna1;Target=FBgn0034566.1 814 1225 +
Chr2	stalkie_big_nohaplotig	exon	105786055	105786146	100	-	.	Parent=FBgn0034566.1.mrna1;Target=FBgn0034566.1 722 813 +
Chr2	stalkie_big_nohaplotig	exon	105786236	105786502	100	-	.	Parent=FBgn0034566.1.mrna1;Target=FBgn0034566.1 455 721 +
Chr2	stalkie_big_nohaplotig	exon	105786566	105786668	100	-	.	Parent=FBgn0034566.1.mrna1;Target=FBgn0034566.1 352 454 +
Chr2	stalkie_big_nohaplotig	exon	105786734	105786976	100	-	.	Parent=FBgn0034566.1.mrna1;Target=FBgn0034566.1 109 351 +
Chr2	stalkie_big_nohaplotig	exon	105787939	105788046	99	-	.	Parent=FBgn0034566.1.mrna1;Target=FBgn0034566.1 1 108 +
Chr2	stalkie_big_nohaplotig	CDS	105782349	105782526	.	-	1	Parent=FBgn0034566.1.mrna1;Target=FBgn0034566.1 2121 2298 +
Chr2	stalkie_big_nohaplotig	CDS	105782589	105783229	.	-	0	Parent=FBgn0034566.1.mrna1;Target=FBgn0034566.1 1480 2120 +
Chr2	stalkie_big_nohaplotig	CDS	105784481	105784590	.	-	2	Parent=FBgn0034566.1.mrna1;Target=FBgn0034566.1 1370 1479 +
Chr2	stalkie_big_nohaplotig	CDS	105785212	105785277	.	-	2	Parent=FBgn0034566.1.mrna1;Target=FBgn0034566.1 1304 1369 +
Chr2	stalkie_big_nohaplotig	CDS	105785355	105785432	.	-	2	Parent=FBgn0034566.1.mrna1;Target=FBgn0034566.1 1226 1303 +
Chr2	stalkie_big_nohaplotig	CDS	105785573	105785984	.	-	0	Parent=FBgn0034566.1.mrna1;Target=FBgn0034566.1 814 1225 +
Chr2	stalkie_big_nohaplotig	CDS	105786055	105786146	.	-	2	Parent=FBgn0034566.1.mrna1;Target=FBgn0034566.1 722 813 +
Chr2	stalkie_big_nohaplotig	CDS	105786236	105786502	.	-	2	Parent=FBgn0034566.1.mrna1;Target=FBgn0034566.1 455 721 +
Chr2	stalkie_big_nohaplotig	CDS	105786566	105786668	.	-	0	Parent=FBgn0034566.1.mrna1;Target=FBgn0034566.1 352 454 +
Chr2	stalkie_big_nohaplotig	CDS	105786734	105786976	.	-	0	Parent=FBgn0034566.1.mrna1;Target=FBgn0034566.1 109 351 +
Chr2	stalkie_big_nohaplotig	CDS	105787939	105788046	.	-	0	Parent=FBgn0034566.1.mrna1;Target=FBgn0034566.1 1 108 +
Chr2	gffcl	locus	105792244	107700418	.	+	.	ID=RLOC_00020241;geneIDs=FBgn0053202.1.path1;transcripts=FBgn0053202.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105792244	107700418	.	+	.	ID=FBgn0053202.1.mrna1;geneID=FBgn0053202.1.path1;Name=FBgn0053202.1;Dir=sensecoverage=98.4;identity=97.0;matches=709;mismatches=1;indels=21;unknowns=0;locus=RLOC_00020241
Chr2	stalkie_big_nohaplotig	exon	105792244	105792262	100	+	.	Parent=FBgn0053202.1.mrna1;Target=FBgn0053202.1 17 35 +
Chr2	stalkie_big_nohaplotig	exon	105796734	105796743	90	+	.	Parent=FBgn0053202.1.mrna1;Target=FBgn0053202.1 36 45 +
Chr2	stalkie_big_nohaplotig	exon	105809534	105809548	100	+	.	Parent=FBgn0053202.1.mrna1;Target=FBgn0053202.1 46 60 +
Chr2	stalkie_big_nohaplotig	exon	105810100	105810108	100	+	.	Parent=FBgn0053202.1.mrna1;Target=FBgn0053202.1 72 80 +
Chr2	stalkie_big_nohaplotig	exon	105813465	105813475	100	+	.	Parent=FBgn0053202.1.mrna1;Target=FBgn0053202.1 81 91 +
Chr2	stalkie_big_nohaplotig	exon	107582576	107582608	36	+	.	Parent=FBgn0053202.1.mrna1;Target=FBgn0053202.1 220 231 +
Chr2	stalkie_big_nohaplotig	exon	107582643	107582647	100	+	.	Parent=FBgn0053202.1.mrna1;Target=FBgn0053202.1 272 276 +
Chr2	stalkie_big_nohaplotig	exon	107589123	107589129	100	+	.	Parent=FBgn0053202.1.mrna1;Target=FBgn0053202.1 277 283 +
Chr2	stalkie_big_nohaplotig	exon	107593693	107593696	100	+	.	Parent=FBgn0053202.1.mrna1;Target=FBgn0053202.1 284 287 +
Chr2	stalkie_big_nohaplotig	exon	107599502	107599503	100	+	.	Parent=FBgn0053202.1.mrna1;Target=FBgn0053202.1 288 289 +
Chr2	stalkie_big_nohaplotig	exon	107607319	107607326	100	+	.	Parent=FBgn0053202.1.mrna1;Target=FBgn0053202.1 290 297 +
Chr2	stalkie_big_nohaplotig	exon	107607347	107607348	100	+	.	Parent=FBgn0053202.1.mrna1;Target=FBgn0053202.1 337 338 +
Chr2	stalkie_big_nohaplotig	exon	107628573	107628581	100	+	.	Parent=FBgn0053202.1.mrna1;Target=FBgn0053202.1 339 347 +
Chr2	stalkie_big_nohaplotig	exon	107628607	107628613	100	+	.	Parent=FBgn0053202.1.mrna1;Target=FBgn0053202.1 385 391 +
Chr2	stalkie_big_nohaplotig	exon	107678410	107678573	100	+	.	Parent=FBgn0053202.1.mrna1;Target=FBgn0053202.1 393 556 +
Chr2	stalkie_big_nohaplotig	exon	107687147	107687355	100	+	.	Parent=FBgn0053202.1.mrna1;Target=FBgn0053202.1 557 765 +
Chr2	stalkie_big_nohaplotig	exon	107691186	107691291	100	+	.	Parent=FBgn0053202.1.mrna1;Target=FBgn0053202.1 766 871 +
Chr2	stalkie_big_nohaplotig	exon	107700309	107700418	100	+	.	Parent=FBgn0053202.1.mrna1;Target=FBgn0053202.1 872 981 +
Chr2	stalkie_big_nohaplotig	CDS	107687254	107687355	.	+	0	Parent=FBgn0053202.1.mrna1;Target=FBgn0053202.1 664 765 +
Chr2	stalkie_big_nohaplotig	CDS	107691186	107691291	.	+	0	Parent=FBgn0053202.1.mrna1;Target=FBgn0053202.1 766 871 +
Chr2	stalkie_big_nohaplotig	CDS	107700309	107700418	.	+	2	Parent=FBgn0053202.1.mrna1;Target=FBgn0053202.1 872 981 +
Chr2	gffcl	locus	105801922	105802814	.	+	.	ID=RLOC_00020242;geneIDs=FBgn0010421.3.path1;transcripts=FBgn0010421.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105801922	105802814	.	+	.	ID=FBgn0010421.3.mrna1;geneID=FBgn0010421.3.path1;Name=FBgn0010421.3;Dir=sensecoverage=100.0;identity=100.0;matches=825;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020242
Chr2	stalkie_big_nohaplotig	exon	105801922	105802452	100	+	.	Parent=FBgn0010421.3.mrna1;Target=FBgn0010421.3 1 531 +
Chr2	stalkie_big_nohaplotig	exon	105802521	105802814	100	+	.	Parent=FBgn0010421.3.mrna1;Target=FBgn0010421.3 532 825 +
Chr2	stalkie_big_nohaplotig	CDS	105801922	105802452	.	+	0	Parent=FBgn0010421.3.mrna1;Target=FBgn0010421.3 1 531 +
Chr2	stalkie_big_nohaplotig	CDS	105802521	105802814	.	+	0	Parent=FBgn0010421.3.mrna1;Target=FBgn0010421.3 532 825 +
Chr2	gffcl	locus	105803954	105814938	.	-	.	ID=RLOC_00020243;geneIDs=comp162864_c1_seq1.path1;transcripts=comp162864_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105803954	105814938	.	-	.	ID=comp162864_c1_seq1.mrna1;geneID=comp162864_c1_seq1.path1;Name=comp162864_c1_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=3403;mismatches=18;indels=12;unknowns=0;locus=RLOC_00020243
Chr2	stalkie_big_nohaplotig	exon	105803954	105804148	99	-	.	Parent=comp162864_c1_seq1.mrna1;Target=comp162864_c1_seq1 1 195 -
Chr2	stalkie_big_nohaplotig	exon	105804214	105806643	99	-	.	Parent=comp162864_c1_seq1.mrna1;Target=comp162864_c1_seq1 196 2631 -
Chr2	stalkie_big_nohaplotig	exon	105806723	105806988	96	-	.	Parent=comp162864_c1_seq1.mrna1;Target=comp162864_c1_seq1 2632 2903 -
Chr2	stalkie_big_nohaplotig	exon	105814112	105814208	100	-	.	Parent=comp162864_c1_seq1.mrna1;Target=comp162864_c1_seq1 2904 3000 -
Chr2	stalkie_big_nohaplotig	exon	105814412	105814677	97	-	.	Parent=comp162864_c1_seq1.mrna1;Target=comp162864_c1_seq1 3001 3266 -
Chr2	stalkie_big_nohaplotig	exon	105814772	105814938	100	-	.	Parent=comp162864_c1_seq1.mrna1;Target=comp162864_c1_seq1 3267 3433 -
Chr2	stalkie_big_nohaplotig	CDS	105806462	105806643	.	-	2	Parent=comp162864_c1_seq1.mrna1;Target=comp162864_c1_seq1 2450 2631 .
Chr2	stalkie_big_nohaplotig	CDS	105806723	105806957	.	-	0	Parent=comp162864_c1_seq1.mrna1;Target=comp162864_c1_seq1 2632 2872 .
Chr2	gffcl	locus	105820007	105820884	.	+	.	ID=RLOC_00020244;geneIDs=comp1309488_c0_seq1.path1;transcripts=comp1309488_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105820007	105820884	.	+	.	ID=comp1309488_c0_seq1.mrna1;geneID=comp1309488_c0_seq1.path1;Name=comp1309488_c0_seq1;Dir=sensecoverage=100.0;identity=99.0;matches=684;mismatches=3;indels=4;unknowns=0;Target=comp1309488_c0_seq1 2 109 +;locus=RLOC_00020244
Chr2	stalkie_big_nohaplotig	exon	105820007	105820288	98	+	.	Parent=comp1309488_c0_seq1.mrna1;Target=comp1309488_c0_seq1 1 280 +
Chr2	stalkie_big_nohaplotig	exon	105820476	105820884	99	+	.	Parent=comp1309488_c0_seq1.mrna1;Target=comp1309488_c0_seq1 281 687 +
Chr2	stalkie_big_nohaplotig	CDS	105820008	105820115	.	+	0	Parent=comp1309488_c0_seq1.mrna1
Chr2	gffcl	locus	105824426	105825235	.	-	.	ID=RLOC_00020245;geneIDs=FBgn0036510.1.path1;transcripts=FBgn0036510.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105824426	105825235	.	-	.	ID=FBgn0036510.1.mrna1;geneID=FBgn0036510.1.path1;Name=FBgn0036510.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=809;mismatches=1;indels=0;unknowns=0;Target=FBgn0036510.1 810 1 .;locus=RLOC_00020245
Chr2	stalkie_big_nohaplotig	exon	105824426	105825235	99	-	.	Parent=FBgn0036510.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105824426	105825235	.	-	0	Parent=FBgn0036510.1.mrna1
Chr2	gffcl	locus	105841395	105842390	.	-	.	ID=RLOC_00020246;geneIDs=FBgn0026373.1.path1;transcripts=FBgn0026373.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105841395	105842390	.	-	.	ID=FBgn0026373.1.mrna1;geneID=FBgn0026373.1.path1;Name=FBgn0026373.1;Dir=sensecoverage=100.0;identity=99.9;matches=926;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020246
Chr2	stalkie_big_nohaplotig	exon	105841395	105842305	99	-	.	Parent=FBgn0026373.1.mrna1;Target=FBgn0026373.1 17 927 +
Chr2	stalkie_big_nohaplotig	exon	105842375	105842390	100	-	.	Parent=FBgn0026373.1.mrna1;Target=FBgn0026373.1 1 16 +
Chr2	stalkie_big_nohaplotig	CDS	105841395	105842305	.	-	2	Parent=FBgn0026373.1.mrna1;Target=FBgn0026373.1 17 927 +
Chr2	stalkie_big_nohaplotig	CDS	105842375	105842390	.	-	0	Parent=FBgn0026373.1.mrna1;Target=FBgn0026373.1 1 16 +
Chr2	gffcl	locus	105846677	105847312	.	-	.	ID=RLOC_00020247;geneIDs=comp144774_c0_seq1.path1;transcripts=comp144774_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105846677	105847312	.	-	.	ID=comp144774_c0_seq1.mrna1;geneID=comp144774_c0_seq1.path1;Name=comp144774_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=575;mismatches=2;indels=1;unknowns=0;locus=RLOC_00020247
Chr2	stalkie_big_nohaplotig	exon	105846677	105847099	99	-	.	Parent=comp144774_c0_seq1.mrna1;Target=comp144774_c0_seq1 155 577 +
Chr2	stalkie_big_nohaplotig	exon	105847158	105847312	98	-	.	Parent=comp144774_c0_seq1.mrna1;Target=comp144774_c0_seq1 1 154 +
Chr2	stalkie_big_nohaplotig	CDS	105846722	105847099	.	-	0	Parent=comp144774_c0_seq1.mrna1;Target=comp144774_c0_seq1 155 532 +
Chr2	stalkie_big_nohaplotig	CDS	105847158	105847199	.	-	0	Parent=comp144774_c0_seq1.mrna1;Target=comp144774_c0_seq1 113 154 +
Chr2	gffcl	locus	105873075	105874359	.	-	.	ID=RLOC_00020248;geneIDs=FBgn0004915.2.path1;transcripts=FBgn0004915.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105873075	105874359	.	-	.	ID=FBgn0004915.2.mrna1;geneID=FBgn0004915.2.path1;Name=FBgn0004915.2;Dir=sensecoverage=100.0;identity=99.9;matches=908;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020248
Chr2	stalkie_big_nohaplotig	exon	105873075	105873215	100	-	.	Parent=FBgn0004915.2.mrna1;Target=FBgn0004915.2 769 909 +
Chr2	stalkie_big_nohaplotig	exon	105873295	105873416	99	-	.	Parent=FBgn0004915.2.mrna1;Target=FBgn0004915.2 647 768 +
Chr2	stalkie_big_nohaplotig	exon	105873488	105873719	100	-	.	Parent=FBgn0004915.2.mrna1;Target=FBgn0004915.2 415 646 +
Chr2	stalkie_big_nohaplotig	exon	105873859	105874252	100	-	.	Parent=FBgn0004915.2.mrna1;Target=FBgn0004915.2 21 414 +
Chr2	stalkie_big_nohaplotig	exon	105874340	105874359	100	-	.	Parent=FBgn0004915.2.mrna1;Target=FBgn0004915.2 1 20 +
Chr2	stalkie_big_nohaplotig	CDS	105873075	105873215	.	-	0	Parent=FBgn0004915.2.mrna1;Target=FBgn0004915.2 769 909 +
Chr2	stalkie_big_nohaplotig	CDS	105873295	105873416	.	-	2	Parent=FBgn0004915.2.mrna1;Target=FBgn0004915.2 647 768 +
Chr2	stalkie_big_nohaplotig	CDS	105873488	105873719	.	-	0	Parent=FBgn0004915.2.mrna1;Target=FBgn0004915.2 415 646 +
Chr2	stalkie_big_nohaplotig	CDS	105873859	105874252	.	-	1	Parent=FBgn0004915.2.mrna1;Target=FBgn0004915.2 21 414 +
Chr2	stalkie_big_nohaplotig	CDS	105874340	105874359	.	-	0	Parent=FBgn0004915.2.mrna1;Target=FBgn0004915.2 1 20 +
Chr2	gffcl	locus	105881623	105881688	.	-	.	ID=RLOC_00020249;geneIDs=FBgn0036978.1.path1,comp161407_c0_seq1.path1;transcripts=FBgn0036978.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105881623	105881688	.	-	.	ID=FBgn0036978.1.mrna1;geneID=FBgn0036978.1.path1;Name=FBgn0036978.1;Dir=indeterminatecoverage=2.3;identity=100.0;matches=66;mismatches=0;indels=0;unknowns=0;Target=FBgn0036978.1 66 1 .;locus=RLOC_00020249
Chr2	stalkie_big_nohaplotig	exon	105881623	105881688	100	-	.	Parent=FBgn0036978.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105881623	105881688	.	-	0	Parent=FBgn0036978.1.mrna1
Chr2	gffcl	locus	105884083	105887665	.	-	.	ID=RLOC_00020250;geneIDs=FBgn0024804.3.path1,FBgn0024804.4.path1;transcripts=FBgn0024804.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105884157	105887665	.	-	.	ID=FBgn0024804.3.mrna1;geneID=FBgn0024804.3.path1;Name=FBgn0024804.3;Dir=sensecoverage=92.6;identity=95.8;matches=889;mismatches=39;indels=0;unknowns=0;locus=RLOC_00020250
Chr2	stalkie_big_nohaplotig	exon	105884157	105884219	77	-	.	Parent=FBgn0024804.3.mrna1;Target=FBgn0024804.3 866 928 +
Chr2	stalkie_big_nohaplotig	exon	105884288	105884404	82	-	.	Parent=FBgn0024804.3.mrna1;Target=FBgn0024804.3 749 865 +
Chr2	stalkie_big_nohaplotig	exon	105885041	105885203	100	-	.	Parent=FBgn0024804.3.mrna1;Target=FBgn0024804.3 586 748 +
Chr2	stalkie_big_nohaplotig	exon	105885261	105885396	100	-	.	Parent=FBgn0024804.3.mrna1;Target=FBgn0024804.3 450 585 +
Chr2	stalkie_big_nohaplotig	exon	105885453	105885554	100	-	.	Parent=FBgn0024804.3.mrna1;Target=FBgn0024804.3 348 449 +
Chr2	stalkie_big_nohaplotig	exon	105885615	105885792	97	-	.	Parent=FBgn0024804.3.mrna1;Target=FBgn0024804.3 170 347 +
Chr2	stalkie_big_nohaplotig	exon	105887115	105887220	100	-	.	Parent=FBgn0024804.3.mrna1;Target=FBgn0024804.3 64 169 +
Chr2	stalkie_big_nohaplotig	exon	105887603	105887665	100	-	.	Parent=FBgn0024804.3.mrna1;Target=FBgn0024804.3 1 63 +
Chr2	stalkie_big_nohaplotig	CDS	105884158	105884219	.	-	2	Parent=FBgn0024804.3.mrna1;Target=FBgn0024804.3 866 927 +
Chr2	stalkie_big_nohaplotig	CDS	105884288	105884404	.	-	2	Parent=FBgn0024804.3.mrna1;Target=FBgn0024804.3 749 865 +
Chr2	stalkie_big_nohaplotig	CDS	105885041	105885203	.	-	0	Parent=FBgn0024804.3.mrna1;Target=FBgn0024804.3 586 748 +
Chr2	stalkie_big_nohaplotig	CDS	105885261	105885396	.	-	1	Parent=FBgn0024804.3.mrna1;Target=FBgn0024804.3 450 585 +
Chr2	stalkie_big_nohaplotig	CDS	105885453	105885554	.	-	1	Parent=FBgn0024804.3.mrna1;Target=FBgn0024804.3 348 449 +
Chr2	stalkie_big_nohaplotig	CDS	105885615	105885792	.	-	2	Parent=FBgn0024804.3.mrna1;Target=FBgn0024804.3 170 347 +
Chr2	stalkie_big_nohaplotig	CDS	105887115	105887220	.	-	0	Parent=FBgn0024804.3.mrna1;Target=FBgn0024804.3 64 169 +
Chr2	stalkie_big_nohaplotig	CDS	105887603	105887665	.	-	0	Parent=FBgn0024804.3.mrna1;Target=FBgn0024804.3 1 63 +
Chr2	gffcl	locus	105888968	105889057	.	-	.	ID=RLOC_00020251;geneIDs=comp149345_c0_seq1.path1;transcripts=comp149345_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105888968	105889057	.	-	.	ID=comp149345_c0_seq1.mrna1;geneID=comp149345_c0_seq1.path1;Name=comp149345_c0_seq1;Dir=indeterminatecoverage=31.9;identity=100.0;matches=90;mismatches=0;indels=0;unknowns=0;Target=comp149345_c0_seq1 101 12 .;locus=RLOC_00020251
Chr2	stalkie_big_nohaplotig	exon	105888968	105889057	100	-	.	Parent=comp149345_c0_seq1.mrna1
Chr2	gffcl	locus	105896901	105897629	.	+	.	ID=RLOC_00020252;geneIDs=comp156510_c0_seq1.path1;transcripts=comp156510_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105896901	105897629	.	+	.	ID=comp156510_c0_seq1.mrna1;geneID=comp156510_c0_seq1.path1;Name=comp156510_c0_seq1;Dir=sensecoverage=99.9;identity=99.9;matches=676;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020252
Chr2	stalkie_big_nohaplotig	exon	105896901	105897405	99	+	.	Parent=comp156510_c0_seq1.mrna1;Target=comp156510_c0_seq1 1 505 +
Chr2	stalkie_big_nohaplotig	exon	105897458	105897629	100	+	.	Parent=comp156510_c0_seq1.mrna1;Target=comp156510_c0_seq1 506 677 +
Chr2	stalkie_big_nohaplotig	CDS	105897033	105897405	.	+	0	Parent=comp156510_c0_seq1.mrna1;Target=comp156510_c0_seq1 133 505 +
Chr2	stalkie_big_nohaplotig	CDS	105897458	105897501	.	+	2	Parent=comp156510_c0_seq1.mrna1;Target=comp156510_c0_seq1 506 549 +
Chr2	gffcl	locus	105900141	105901472	.	-	.	ID=RLOC_00020253;geneIDs=comp89416_c0_seq1.path1,comp135463_c0_seq1.path1,comp150104_c1_seq1.path1;transcripts=comp150104_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105900518	105901082	.	-	.	ID=comp150104_c1_seq1.mrna1;geneID=comp150104_c1_seq1.path1;Name=comp150104_c1_seq1;Dir=indeterminatecoverage=98.4;identity=99.6;matches=563;mismatches=2;indels=0;unknowns=0;Target=comp150104_c1_seq1 574 10 .;CDS_Target=comp150104_c1_seq1 354 292 .;locus=RLOC_00020253
Chr2	stalkie_big_nohaplotig	exon	105900518	105901082	99	-	.	Parent=comp150104_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105900738	105900800	.	-	0	Parent=comp150104_c1_seq1.mrna1
Chr2	gffcl	locus	105901521	105902454	.	-	.	ID=RLOC_00020254;geneIDs=comp148937_c0_seq1.path1;transcripts=comp148937_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105901521	105902454	.	-	.	ID=comp148937_c0_seq1.mrna1;geneID=comp148937_c0_seq1.path1;Name=comp148937_c0_seq1;Dir=indeterminatecoverage=90.4;identity=99.7;matches=932;mismatches=2;indels=1;unknowns=0;Target=comp148937_c0_seq1 943 9 .;CDS_Target=comp148937_c0_seq1 556 464 .;locus=RLOC_00020254
Chr2	stalkie_big_nohaplotig	exon	105901521	105902454	99	-	.	Parent=comp148937_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105901908	105902000	.	-	0	Parent=comp148937_c0_seq1.mrna1
Chr2	gffcl	locus	105902849	105903038	.	-	.	ID=RLOC_00020255;geneIDs=comp130407_c0_seq1.path1;transcripts=comp130407_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105902849	105903038	.	-	.	ID=comp130407_c0_seq1.mrna1;geneID=comp130407_c0_seq1.path1;Name=comp130407_c0_seq1;Dir=indeterminatecoverage=90.5;identity=96.9;matches=185;mismatches=5;indels=1;unknowns=0;Target=comp130407_c0_seq1 211 21 .;CDS_Target=comp130407_c0_seq1 208 128 .;locus=RLOC_00020255
Chr2	stalkie_big_nohaplotig	exon	105902849	105903038	96	-	.	Parent=comp130407_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105902852	105902932	.	-	0	Parent=comp130407_c0_seq1.mrna1
Chr2	gffcl	locus	105903754	105904531	.	+	.	ID=RLOC_00020256;geneIDs=comp158315_c0_seq1.path1;transcripts=comp158315_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105903754	105904531	.	+	.	ID=comp158315_c0_seq1.mrna1;geneID=comp158315_c0_seq1.path1;Name=comp158315_c0_seq1;Dir=indeterminatecoverage=94.1;identity=95.7;matches=753;mismatches=18;indels=16;unknowns=0;Target=comp158315_c0_seq1 780 1 .;CDS_Target=comp158315_c0_seq1 447 376 .;locus=RLOC_00020256
Chr2	stalkie_big_nohaplotig	exon	105903754	105904531	95	+	.	Parent=comp158315_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105904129	105904200	.	+	0	Parent=comp158315_c0_seq1.mrna1
Chr2	gffcl	locus	105905960	105977976	.	-	.	ID=RLOC_00020257;geneIDs=FBgn0053547.path1,comp160966_c0_seq1.path1;transcripts=comp160966_c0_seq1.mrna1,FBgn0053547.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105905960	105927656	.	-	.	ID=comp160966_c0_seq1.mrna1;geneID=comp160966_c0_seq1.path1;Name=comp160966_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=3651;mismatches=6;indels=0;unknowns=0;locus=RLOC_00020257
Chr2	stalkie_big_nohaplotig	exon	105905960	105906238	100	-	.	Parent=comp160966_c0_seq1.mrna1;Target=comp160966_c0_seq1 1 279 -
Chr2	stalkie_big_nohaplotig	exon	105910983	105911114	100	-	.	Parent=comp160966_c0_seq1.mrna1;Target=comp160966_c0_seq1 280 411 -
Chr2	stalkie_big_nohaplotig	exon	105911682	105911849	99	-	.	Parent=comp160966_c0_seq1.mrna1;Target=comp160966_c0_seq1 412 579 -
Chr2	stalkie_big_nohaplotig	exon	105912020	105912200	100	-	.	Parent=comp160966_c0_seq1.mrna1;Target=comp160966_c0_seq1 580 760 -
Chr2	stalkie_big_nohaplotig	exon	105922848	105923019	100	-	.	Parent=comp160966_c0_seq1.mrna1;Target=comp160966_c0_seq1 761 932 -
Chr2	stalkie_big_nohaplotig	exon	105923418	105923540	100	-	.	Parent=comp160966_c0_seq1.mrna1;Target=comp160966_c0_seq1 933 1055 -
Chr2	stalkie_big_nohaplotig	exon	105925055	105927656	99	-	.	Parent=comp160966_c0_seq1.mrna1;Target=comp160966_c0_seq1 1056 3657 -
Chr2	stalkie_big_nohaplotig	CDS	105906236	105906238	.	-	0	Parent=comp160966_c0_seq1.mrna1;Target=comp160966_c0_seq1 277 279 .
Chr2	stalkie_big_nohaplotig	CDS	105910983	105911114	.	-	0	Parent=comp160966_c0_seq1.mrna1;Target=comp160966_c0_seq1 280 411 .
Chr2	stalkie_big_nohaplotig	CDS	105911682	105911849	.	-	0	Parent=comp160966_c0_seq1.mrna1;Target=comp160966_c0_seq1 412 579 .
Chr2	stalkie_big_nohaplotig	CDS	105912020	105912200	.	-	1	Parent=comp160966_c0_seq1.mrna1;Target=comp160966_c0_seq1 580 760 .
Chr2	stalkie_big_nohaplotig	CDS	105922848	105923019	.	-	2	Parent=comp160966_c0_seq1.mrna1;Target=comp160966_c0_seq1 761 932 .
Chr2	stalkie_big_nohaplotig	CDS	105923418	105923540	.	-	2	Parent=comp160966_c0_seq1.mrna1;Target=comp160966_c0_seq1 933 1055 .
Chr2	stalkie_big_nohaplotig	CDS	105925055	105927656	.	-	0	Parent=comp160966_c0_seq1.mrna1;Target=comp160966_c0_seq1 1056 3657 .
Chr2	stalkie_big_nohaplotig	mRNA	105910908	105977976	.	-	.	ID=FBgn0053547.mrna1;geneID=FBgn0053547.path1;Name=FBgn0053547;Dir=sensecoverage=99.9;identity=99.8;matches=3094;mismatches=5;indels=0;unknowns=0;locus=RLOC_00020257
Chr2	stalkie_big_nohaplotig	exon	105910908	105911114	100	-	.	Parent=FBgn0053547.mrna1;Target=FBgn0053547 2896 3102 +
Chr2	stalkie_big_nohaplotig	exon	105911682	105911849	99	-	.	Parent=FBgn0053547.mrna1;Target=FBgn0053547 2728 2895 +
Chr2	stalkie_big_nohaplotig	exon	105912020	105912200	100	-	.	Parent=FBgn0053547.mrna1;Target=FBgn0053547 2547 2727 +
Chr2	stalkie_big_nohaplotig	exon	105922848	105923019	100	-	.	Parent=FBgn0053547.mrna1;Target=FBgn0053547 2375 2546 +
Chr2	stalkie_big_nohaplotig	exon	105923418	105923540	100	-	.	Parent=FBgn0053547.mrna1;Target=FBgn0053547 2252 2374 +
Chr2	stalkie_big_nohaplotig	exon	105925055	105925134	100	-	.	Parent=FBgn0053547.mrna1;Target=FBgn0053547 2172 2251 +
Chr2	stalkie_big_nohaplotig	exon	105928746	105929086	100	-	.	Parent=FBgn0053547.mrna1;Target=FBgn0053547 1831 2171 +
Chr2	stalkie_big_nohaplotig	exon	105930378	105930761	100	-	.	Parent=FBgn0053547.mrna1;Target=FBgn0053547 1447 1830 +
Chr2	stalkie_big_nohaplotig	exon	105947205	105948130	99	-	.	Parent=FBgn0053547.mrna1;Target=FBgn0053547 521 1446 +
Chr2	stalkie_big_nohaplotig	exon	105977460	105977976	99	-	.	Parent=FBgn0053547.mrna1;Target=FBgn0053547 4 520 +
Chr2	stalkie_big_nohaplotig	CDS	105910908	105911114	.	-	0	Parent=FBgn0053547.mrna1;Target=FBgn0053547 2896 3102 +
Chr2	stalkie_big_nohaplotig	CDS	105911682	105911849	.	-	0	Parent=FBgn0053547.mrna1;Target=FBgn0053547 2728 2895 +
Chr2	stalkie_big_nohaplotig	CDS	105912020	105912200	.	-	1	Parent=FBgn0053547.mrna1;Target=FBgn0053547 2547 2727 +
Chr2	stalkie_big_nohaplotig	CDS	105922848	105923019	.	-	2	Parent=FBgn0053547.mrna1;Target=FBgn0053547 2375 2546 +
Chr2	stalkie_big_nohaplotig	CDS	105923418	105923540	.	-	2	Parent=FBgn0053547.mrna1;Target=FBgn0053547 2252 2374 +
Chr2	stalkie_big_nohaplotig	CDS	105925055	105925134	.	-	1	Parent=FBgn0053547.mrna1;Target=FBgn0053547 2172 2251 +
Chr2	stalkie_big_nohaplotig	CDS	105928746	105929086	.	-	0	Parent=FBgn0053547.mrna1;Target=FBgn0053547 1831 2171 +
Chr2	stalkie_big_nohaplotig	CDS	105930378	105930761	.	-	0	Parent=FBgn0053547.mrna1;Target=FBgn0053547 1447 1830 +
Chr2	stalkie_big_nohaplotig	CDS	105947205	105948130	.	-	2	Parent=FBgn0053547.mrna1;Target=FBgn0053547 521 1446 +
Chr2	stalkie_big_nohaplotig	CDS	105977460	105977976	.	-	0	Parent=FBgn0053547.mrna1;Target=FBgn0053547 4 520 +
Chr2	gffcl	locus	105906891	105907345	.	+	.	ID=RLOC_00020258;geneIDs=comp147715_c0_seq1.path1;transcripts=comp147715_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105906891	105907345	.	+	.	ID=comp147715_c0_seq1.mrna1;geneID=comp147715_c0_seq1.path1;Name=comp147715_c0_seq1;Dir=indeterminatecoverage=99.1;identity=98.2;matches=447;mismatches=8;indels=0;unknowns=0;Target=comp147715_c0_seq1 459 5 .;CDS_Target=comp147715_c0_seq1 173 6 .;locus=RLOC_00020258
Chr2	stalkie_big_nohaplotig	exon	105906891	105907345	98	+	.	Parent=comp147715_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	105906892	105907059	.	+	0	Parent=comp147715_c0_seq1.mrna1
Chr2	gffcl	locus	105991920	105992692	.	+	.	ID=RLOC_00020259;geneIDs=comp144776_c0_seq1.path1;transcripts=comp144776_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	105991920	105992692	.	+	.	ID=comp144776_c0_seq1.mrna1;geneID=comp144776_c0_seq1.path1;Name=comp144776_c0_seq1;Dir=sensecoverage=94.8;identity=98.3;matches=595;mismatches=10;indels=0;unknowns=0;locus=RLOC_00020259
Chr2	stalkie_big_nohaplotig	exon	105991920	105992043	98	+	.	Parent=comp144776_c0_seq1.mrna1;Target=comp144776_c0_seq1 9 132 +
Chr2	stalkie_big_nohaplotig	exon	105992095	105992181	100	+	.	Parent=comp144776_c0_seq1.mrna1;Target=comp144776_c0_seq1 133 219 +
Chr2	stalkie_big_nohaplotig	exon	105992299	105992692	97	+	.	Parent=comp144776_c0_seq1.mrna1;Target=comp144776_c0_seq1 220 613 +
Chr2	stalkie_big_nohaplotig	CDS	105992035	105992043	.	+	0	Parent=comp144776_c0_seq1.mrna1;Target=comp144776_c0_seq1 124 132 +
Chr2	stalkie_big_nohaplotig	CDS	105992095	105992181	.	+	0	Parent=comp144776_c0_seq1.mrna1;Target=comp144776_c0_seq1 133 219 +
Chr2	stalkie_big_nohaplotig	CDS	105992299	105992598	.	+	0	Parent=comp144776_c0_seq1.mrna1;Target=comp144776_c0_seq1 220 519 +
Chr2	gffcl	locus	106019180	106019952	.	-	.	ID=RLOC_00020260;geneIDs=comp161870_c0_seq1.path7;transcripts=comp161870_c0_seq1.mrna7
Chr2	stalkie_big_nohaplotig	mRNA	106019180	106019952	.	-	.	ID=comp161870_c0_seq1.mrna7;geneID=comp161870_c0_seq1.path7;Name=comp161870_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.7;matches=742;mismatches=11;indels=22;unknowns=0;Target=comp161870_c0_seq1 755 1 .;CDS_Target=comp161870_c0_seq1 316 206 .;locus=RLOC_00020260
Chr2	stalkie_big_nohaplotig	exon	106019180	106019952	95	-	.	Parent=comp161870_c0_seq1.mrna7
Chr2	stalkie_big_nohaplotig	CDS	106019638	106019747	.	-	0	Parent=comp161870_c0_seq1.mrna7
Chr2	gffcl	locus	106027301	106028091	.	-	.	ID=RLOC_00020261;geneIDs=comp152116_c0_seq1.path1;transcripts=comp152116_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106027301	106028091	.	-	.	ID=comp152116_c0_seq1.mrna1;geneID=comp152116_c0_seq1.path1;Name=comp152116_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.1;matches=784;mismatches=7;indels=0;unknowns=0;Target=comp152116_c0_seq1 794 4 .;CDS_Target=comp152116_c0_seq1 296 225 .;locus=RLOC_00020261
Chr2	stalkie_big_nohaplotig	exon	106027301	106028091	99	-	.	Parent=comp152116_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	106027799	106027870	.	-	0	Parent=comp152116_c0_seq1.mrna1
Chr2	gffcl	locus	106142667	106143134	.	-	.	ID=RLOC_00020262;geneIDs=FBgn0263995.path1;transcripts=FBgn0263995.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106142667	106143134	.	-	.	ID=FBgn0263995.mrna1;geneID=FBgn0263995.path1;Name=FBgn0263995;Dir=indeterminatecoverage=47.1;identity=94.2;matches=441;mismatches=3;indels=24;unknowns=0;Target=FBgn0263995 444 1 .;locus=RLOC_00020262
Chr2	stalkie_big_nohaplotig	exon	106142667	106143134	94	-	.	Parent=FBgn0263995.mrna1
Chr2	stalkie_big_nohaplotig	CDS	106142667	106143134	.	-	0	Parent=FBgn0263995.mrna1
Chr2	gffcl	locus	106239316	106241290	.	+	.	ID=RLOC_00020263;geneIDs=Dv_FBgn0201266.2.path1;transcripts=Dv_FBgn0201266.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106239316	106241290	.	+	.	ID=Dv_FBgn0201266.2.mrna1;geneID=Dv_FBgn0201266.2.path1;Name=Dv_FBgn0201266.2;Dir=sensecoverage=100.0;identity=100.0;matches=1401;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020263
Chr2	stalkie_big_nohaplotig	exon	106239316	106239564	100	+	.	Parent=Dv_FBgn0201266.2.mrna1;Target=Dv_FBgn0201266.2 1 249 +
Chr2	stalkie_big_nohaplotig	exon	106239615	106240008	100	+	.	Parent=Dv_FBgn0201266.2.mrna1;Target=Dv_FBgn0201266.2 250 643 +
Chr2	stalkie_big_nohaplotig	exon	106240061	106240163	100	+	.	Parent=Dv_FBgn0201266.2.mrna1;Target=Dv_FBgn0201266.2 644 746 +
Chr2	stalkie_big_nohaplotig	exon	106240215	106240750	100	+	.	Parent=Dv_FBgn0201266.2.mrna1;Target=Dv_FBgn0201266.2 747 1282 +
Chr2	stalkie_big_nohaplotig	exon	106241172	106241290	100	+	.	Parent=Dv_FBgn0201266.2.mrna1;Target=Dv_FBgn0201266.2 1283 1401 +
Chr2	stalkie_big_nohaplotig	CDS	106239316	106239564	.	+	0	Parent=Dv_FBgn0201266.2.mrna1;Target=Dv_FBgn0201266.2 1 249 +
Chr2	stalkie_big_nohaplotig	CDS	106239615	106240008	.	+	0	Parent=Dv_FBgn0201266.2.mrna1;Target=Dv_FBgn0201266.2 250 643 +
Chr2	stalkie_big_nohaplotig	CDS	106240061	106240163	.	+	2	Parent=Dv_FBgn0201266.2.mrna1;Target=Dv_FBgn0201266.2 644 746 +
Chr2	stalkie_big_nohaplotig	CDS	106240215	106240750	.	+	1	Parent=Dv_FBgn0201266.2.mrna1;Target=Dv_FBgn0201266.2 747 1282 +
Chr2	stalkie_big_nohaplotig	CDS	106241172	106241290	.	+	2	Parent=Dv_FBgn0201266.2.mrna1;Target=Dv_FBgn0201266.2 1283 1401 +
Chr2	gffcl	locus	106247320	106247582	.	-	.	ID=RLOC_00020264;geneIDs=comp151221_c0_seq1.path1;transcripts=comp151221_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106247320	106247582	.	-	.	ID=comp151221_c0_seq1.mrna1;geneID=comp151221_c0_seq1.path1;Name=comp151221_c0_seq1;Dir=indeterminatecoverage=87.7;identity=98.9;matches=260;mismatches=3;indels=0;unknowns=0;Target=comp151221_c0_seq1 285 23 .;CDS_Target=comp151221_c0_seq1 191 78 .;locus=RLOC_00020264
Chr2	stalkie_big_nohaplotig	exon	106247320	106247582	98	-	.	Parent=comp151221_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	106247414	106247527	.	-	0	Parent=comp151221_c0_seq1.mrna1
Chr2	gffcl	locus	106249647	106251031	.	-	.	ID=RLOC_00020265;geneIDs=comp158885_c0_seq1.path1;transcripts=comp158885_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106249647	106251031	.	-	.	ID=comp158885_c0_seq1.mrna1;geneID=comp158885_c0_seq1.path1;Name=comp158885_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=1365;mismatches=18;indels=9;unknowns=0;Target=comp158885_c0_seq1 1390 1 .;CDS_Target=comp158885_c0_seq1 212 3 .;locus=RLOC_00020265
Chr2	stalkie_big_nohaplotig	exon	106249647	106251031	98	-	.	Parent=comp158885_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	106250821	106251029	.	-	0	Parent=comp158885_c0_seq1.mrna1
Chr2	gffcl	locus	106252479	106252683	.	+	.	ID=RLOC_00020266;geneIDs=comp116660_c0_seq1.path1;transcripts=comp116660_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106252479	106252683	.	+	.	ID=comp116660_c0_seq1.mrna1;geneID=comp116660_c0_seq1.path1;Name=comp116660_c0_seq1;Dir=indeterminatecoverage=90.8;identity=98.1;matches=203;mismatches=2;indels=2;unknowns=0;Target=comp116660_c0_seq1 207 1 .;CDS_Target=comp116660_c0_seq1 26 3 .;locus=RLOC_00020266
Chr2	stalkie_big_nohaplotig	exon	106252479	106252683	98	+	.	Parent=comp116660_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	106252481	106252504	.	+	0	Parent=comp116660_c0_seq1.mrna1
Chr2	gffcl	locus	106252883	106253715	.	+	.	ID=RLOC_00020267;geneIDs=comp150087_c0_seq1.path1;transcripts=comp150087_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106252883	106253715	.	+	.	ID=comp150087_c0_seq1.mrna1;geneID=comp150087_c0_seq1.path1;Name=comp150087_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=829;mismatches=4;indels=0;unknowns=0;Target=comp150087_c0_seq1 833 1 .;CDS_Target=comp150087_c0_seq1 241 2 .;locus=RLOC_00020267
Chr2	stalkie_big_nohaplotig	exon	106252883	106253715	99	+	.	Parent=comp150087_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	106252884	106253123	.	+	0	Parent=comp150087_c0_seq1.mrna1
Chr2	gffcl	locus	106269610	106278604	.	-	.	ID=RLOC_00020268;geneIDs=FBgn0263995.path2;transcripts=FBgn0263995.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	106269610	106278604	.	-	.	ID=FBgn0263995.mrna2;geneID=FBgn0263995.path2;Name=FBgn0263995;Dir=sensecoverage=52.9;identity=99.8;matches=497;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020268
Chr2	stalkie_big_nohaplotig	exon	106269610	106269767	100	-	.	Parent=FBgn0263995.mrna2;Target=FBgn0263995 785 942 +
Chr2	stalkie_big_nohaplotig	exon	106273804	106273948	100	-	.	Parent=FBgn0263995.mrna2;Target=FBgn0263995 640 784 +
Chr2	stalkie_big_nohaplotig	exon	106277269	106277331	100	-	.	Parent=FBgn0263995.mrna2;Target=FBgn0263995 577 639 +
Chr2	stalkie_big_nohaplotig	exon	106277398	106277451	100	-	.	Parent=FBgn0263995.mrna2;Target=FBgn0263995 523 576 +
Chr2	stalkie_big_nohaplotig	exon	106278527	106278604	98	-	.	Parent=FBgn0263995.mrna2;Target=FBgn0263995 445 522 +
Chr2	stalkie_big_nohaplotig	CDS	106269610	106269767	.	-	2	Parent=FBgn0263995.mrna2;Target=FBgn0263995 785 942 +
Chr2	stalkie_big_nohaplotig	CDS	106273804	106273948	.	-	0	Parent=FBgn0263995.mrna2;Target=FBgn0263995 640 784 +
Chr2	stalkie_big_nohaplotig	CDS	106277269	106277331	.	-	0	Parent=FBgn0263995.mrna2;Target=FBgn0263995 577 639 +
Chr2	stalkie_big_nohaplotig	CDS	106277398	106277451	.	-	0	Parent=FBgn0263995.mrna2;Target=FBgn0263995 523 576 +
Chr2	stalkie_big_nohaplotig	CDS	106278527	106278604	.	-	0	Parent=FBgn0263995.mrna2;Target=FBgn0263995 445 522 +
Chr2	gffcl	locus	106342918	106343963	.	+	.	ID=RLOC_00020270;geneIDs=FBgn0038564.1.path1;transcripts=FBgn0038564.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106342918	106343963	.	+	.	ID=FBgn0038564.1.mrna1;geneID=FBgn0038564.1.path1;Name=FBgn0038564.1;Dir=sensecoverage=100.0;identity=100.0;matches=777;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020270
Chr2	stalkie_big_nohaplotig	exon	106342918	106343029	100	+	.	Parent=FBgn0038564.1.mrna1;Target=FBgn0038564.1 1 112 +
Chr2	stalkie_big_nohaplotig	exon	106343235	106343804	100	+	.	Parent=FBgn0038564.1.mrna1;Target=FBgn0038564.1 113 682 +
Chr2	stalkie_big_nohaplotig	exon	106343869	106343963	100	+	.	Parent=FBgn0038564.1.mrna1;Target=FBgn0038564.1 683 777 +
Chr2	stalkie_big_nohaplotig	CDS	106342918	106343029	.	+	0	Parent=FBgn0038564.1.mrna1;Target=FBgn0038564.1 1 112 +
Chr2	stalkie_big_nohaplotig	CDS	106343235	106343804	.	+	2	Parent=FBgn0038564.1.mrna1;Target=FBgn0038564.1 113 682 +
Chr2	stalkie_big_nohaplotig	CDS	106343869	106343963	.	+	2	Parent=FBgn0038564.1.mrna1;Target=FBgn0038564.1 683 777 +
Chr2	gffcl	locus	106353074	106357719	.	-	.	ID=RLOC_00020271;geneIDs=comp163797_c1_seq1.path1;transcripts=comp163797_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106353074	106357719	.	-	.	ID=comp163797_c1_seq1.mrna1;geneID=comp163797_c1_seq1.path1;Name=comp163797_c1_seq1;Dir=antisensecoverage=64.5;identity=99.7;matches=1485;mismatches=4;indels=0;unknowns=0;locus=RLOC_00020271
Chr2	stalkie_big_nohaplotig	exon	106353074	106354043	100	-	.	Parent=comp163797_c1_seq1.mrna1;Target=comp163797_c1_seq1 1 970 -
Chr2	stalkie_big_nohaplotig	exon	106354249	106354472	100	-	.	Parent=comp163797_c1_seq1.mrna1;Target=comp163797_c1_seq1 971 1194 -
Chr2	stalkie_big_nohaplotig	exon	106356266	106356432	100	-	.	Parent=comp163797_c1_seq1.mrna1;Target=comp163797_c1_seq1 1195 1361 -
Chr2	stalkie_big_nohaplotig	exon	106357592	106357719	96	-	.	Parent=comp163797_c1_seq1.mrna1;Target=comp163797_c1_seq1 1362 1489 -
Chr2	stalkie_big_nohaplotig	CDS	106353877	106354043	.	-	2	Parent=comp163797_c1_seq1.mrna1;Target=comp163797_c1_seq1 804 970 .
Chr2	stalkie_big_nohaplotig	CDS	106354249	106354472	.	-	1	Parent=comp163797_c1_seq1.mrna1;Target=comp163797_c1_seq1 971 1194 .
Chr2	stalkie_big_nohaplotig	CDS	106356266	106356432	.	-	0	Parent=comp163797_c1_seq1.mrna1;Target=comp163797_c1_seq1 1195 1361 .
Chr2	stalkie_big_nohaplotig	CDS	106357592	106357657	.	-	0	Parent=comp163797_c1_seq1.mrna1;Target=comp163797_c1_seq1 1362 1427 .
Chr2	gffcl	locus	106358276	106359315	.	-	.	ID=RLOC_00020272;geneIDs=comp161747_c3_seq1.path1;transcripts=comp161747_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106358276	106359315	.	-	.	ID=comp161747_c3_seq1.mrna1;geneID=comp161747_c3_seq1.path1;Name=comp161747_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1039;mismatches=1;indels=0;unknowns=0;Target=comp161747_c3_seq1 1040 1 .;CDS_Target=comp161747_c3_seq1 682 314 .;locus=RLOC_00020272
Chr2	stalkie_big_nohaplotig	exon	106358276	106359315	99	-	.	Parent=comp161747_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	106358634	106359002	.	-	0	Parent=comp161747_c3_seq1.mrna1
Chr2	gffcl	locus	106399891	106400841	.	+	.	ID=RLOC_00020274;geneIDs=comp150389_c0_seq1.path1;transcripts=comp150389_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106399891	106400841	.	+	.	ID=comp150389_c0_seq1.mrna1;geneID=comp150389_c0_seq1.path1;Name=comp150389_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=857;mismatches=9;indels=10;unknowns=0;locus=RLOC_00020274
Chr2	stalkie_big_nohaplotig	exon	106399891	106399959	95	+	.	Parent=comp150389_c0_seq1.mrna1;Target=comp150389_c0_seq1 67 1 .
Chr2	stalkie_big_nohaplotig	exon	106399985	106400172	91	+	.	Parent=comp150389_c0_seq1.mrna1;Target=comp150389_c0_seq1 247 68 .
Chr2	stalkie_big_nohaplotig	exon	106400223	106400841	100	+	.	Parent=comp150389_c0_seq1.mrna1;Target=comp150389_c0_seq1 866 248 .
Chr2	stalkie_big_nohaplotig	CDS	106399893	106399959	.	+	0	Parent=comp150389_c0_seq1.mrna1;Target=comp150389_c0_seq1 67 3 .
Chr2	stalkie_big_nohaplotig	CDS	106399985	106400003	.	+	2	Parent=comp150389_c0_seq1.mrna1;Target=comp150389_c0_seq1 86 68 .
Chr2	gffcl	locus	106421676	106422127	.	-	.	ID=RLOC_00020275;geneIDs=comp150944_c0_seq1.path1;transcripts=comp150944_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106421676	106422127	.	-	.	ID=comp150944_c0_seq1.mrna1;geneID=comp150944_c0_seq1.path1;Name=comp150944_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=452;mismatches=0;indels=0;unknowns=0;Target=comp150944_c0_seq1 452 1 .;CDS_Target=comp150944_c0_seq1 164 108 .;locus=RLOC_00020275
Chr2	stalkie_big_nohaplotig	exon	106421676	106422127	100	-	.	Parent=comp150944_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	106421964	106422020	.	-	0	Parent=comp150944_c0_seq1.mrna1
Chr2	gffcl	locus	106469834	106471308	.	+	.	ID=RLOC_00020276;geneIDs=comp163509_c1_seq1.path1;transcripts=comp163509_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106469834	106471308	.	+	.	ID=comp163509_c1_seq1.mrna1;geneID=comp163509_c1_seq1.path1;Name=comp163509_c1_seq1;Dir=indeterminatecoverage=99.8;identity=99.2;matches=1463;mismatches=12;indels=0;unknowns=0;Target=comp163509_c1_seq1 1475 1 .;CDS_Target=comp163509_c1_seq1 1204 1094 .;locus=RLOC_00020276
Chr2	stalkie_big_nohaplotig	exon	106469834	106471308	99	+	.	Parent=comp163509_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	106470927	106471037	.	+	0	Parent=comp163509_c1_seq1.mrna1
Chr2	gffcl	locus	106532047	106533222	.	-	.	ID=RLOC_00020277;geneIDs=comp163372_c1_seq1.path1;transcripts=comp163372_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106532047	106533222	.	-	.	ID=comp163372_c1_seq1.mrna1;geneID=comp163372_c1_seq1.path1;Name=comp163372_c1_seq1;Dir=indeterminatecoverage=89.8;identity=96.3;matches=1134;mismatches=42;indels=1;unknowns=0;Target=comp163372_c1_seq1 1311 135 .;CDS_Target=comp163372_c1_seq1 1216 137 .;locus=RLOC_00020277
Chr2	stalkie_big_nohaplotig	exon	106532047	106533222	96	-	.	Parent=comp163372_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	106532142	106533220	.	-	0	Parent=comp163372_c1_seq1.mrna1
Chr2	gffcl	locus	106591130	106596605	.	-	.	ID=RLOC_00020279;geneIDs=comp157476_c2_seq1.path1;transcripts=comp157476_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106591130	106596605	.	-	.	ID=comp157476_c2_seq1.mrna1;geneID=comp157476_c2_seq1.path1;Name=comp157476_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=5454;mismatches=17;indels=6;unknowns=0;Target=comp157476_c2_seq1 5473 2 .;CDS_Target=comp157476_c2_seq1 220 2 .;locus=RLOC_00020279
Chr2	stalkie_big_nohaplotig	exon	106591130	106596605	99	-	.	Parent=comp157476_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	106596387	106596605	.	-	0	Parent=comp157476_c2_seq1.mrna1
Chr2	gffcl	locus	106628322	108410009	.	+	.	ID=RLOC_00020280;geneIDs=comp158818_c1_seq1.path1,comp162496_c1_seq1.path1,comp163091_c2_seq1.path1;transcripts=comp162496_c1_seq1.mrna1,comp163091_c2_seq1.mrna1,comp158818_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106628322	106634046	.	+	.	ID=comp162496_c1_seq1.mrna1;geneID=comp162496_c1_seq1.path1;Name=comp162496_c1_seq1;Dir=indeterminatecoverage=90.0;identity=93.4;matches=3221;mismatches=173;indels=56;unknowns=0;Target=comp162496_c1_seq1 1632 1570 .;locus=RLOC_00020280
Chr2	stalkie_big_nohaplotig	exon	106628322	106629267	89	+	.	Parent=comp162496_c1_seq1.mrna1;Target=comp162496_c1_seq1 1309 381 .
Chr2	stalkie_big_nohaplotig	exon	106631574	106634046	94	+	.	Parent=comp162496_c1_seq1.mrna1;Target=comp162496_c1_seq1 3805 1310 .
Chr2	stalkie_big_nohaplotig	CDS	106631834	106631882	.	+	0	Parent=comp162496_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106634029	106831116	.	+	.	ID=comp163091_c2_seq1.mrna1;geneID=comp163091_c2_seq1.path1;Name=comp163091_c2_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=3281;mismatches=4;indels=0;unknowns=0;Target=comp163091_c2_seq1 1221 1391 .;locus=RLOC_00020280
Chr2	stalkie_big_nohaplotig	exon	106634029	106636298	99	+	.	Parent=comp163091_c2_seq1.mrna1;Target=comp163091_c2_seq1 1016 3285 -
Chr2	stalkie_big_nohaplotig	exon	106830102	106831116	99	+	.	Parent=comp163091_c2_seq1.mrna1;Target=comp163091_c2_seq1 1 1015 -
Chr2	stalkie_big_nohaplotig	CDS	106635923	106636093	.	+	0	Parent=comp163091_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106828996	108410009	.	+	.	ID=comp158818_c1_seq1.mrna1;geneID=comp158818_c1_seq1.path1;Name=comp158818_c1_seq1;Dir=indeterminatecoverage=93.4;identity=98.1;matches=1204;mismatches=12;indels=11;unknowns=0;Target=comp158818_c1_seq1 333 133 .;locus=RLOC_00020280
Chr2	stalkie_big_nohaplotig	exon	106828996	106830111	99	+	.	Parent=comp158818_c1_seq1.mrna1;Target=comp158818_c1_seq1 1123 8 .
Chr2	stalkie_big_nohaplotig	exon	106830149	106830159	100	+	.	Parent=comp158818_c1_seq1.mrna1;Target=comp158818_c1_seq1 1187 1177 .
Chr2	stalkie_big_nohaplotig	exon	108375247	108375254	100	+	.	Parent=comp158818_c1_seq1.mrna1;Target=comp158818_c1_seq1 1237 1230 .
Chr2	stalkie_big_nohaplotig	exon	108379727	108379731	100	+	.	Parent=comp158818_c1_seq1.mrna1;Target=comp158818_c1_seq1 1242 1238 .
Chr2	stalkie_big_nohaplotig	exon	108380433	108380440	100	+	.	Parent=comp158818_c1_seq1.mrna1;Target=comp158818_c1_seq1 1250 1243 .
Chr2	stalkie_big_nohaplotig	exon	108380577	108380588	92	+	.	Parent=comp158818_c1_seq1.mrna1;Target=comp158818_c1_seq1 1263 1251 .
Chr2	stalkie_big_nohaplotig	exon	108392128	108392157	53	+	.	Parent=comp158818_c1_seq1.mrna1;Target=comp158818_c1_seq1 1301 1264 .
Chr2	stalkie_big_nohaplotig	exon	108403378	108403386	100	+	.	Parent=comp158818_c1_seq1.mrna1;Target=comp158818_c1_seq1 1310 1302 .
Chr2	stalkie_big_nohaplotig	exon	108404637	108404640	100	+	.	Parent=comp158818_c1_seq1.mrna1;Target=comp158818_c1_seq1 1314 1311 .
Chr2	stalkie_big_nohaplotig	exon	108405058	108405063	100	+	.	Parent=comp158818_c1_seq1.mrna1;Target=comp158818_c1_seq1 1320 1315 .
Chr2	stalkie_big_nohaplotig	exon	108410003	108410009	100	+	.	Parent=comp158818_c1_seq1.mrna1;Target=comp158818_c1_seq1 1327 1321 .
Chr2	stalkie_big_nohaplotig	CDS	106829121	106829321	.	+	0	Parent=comp158818_c1_seq1.mrna1
Chr2	gffcl	locus	106653430	106654325	.	+	.	ID=RLOC_00020282;geneIDs=comp162383_c2_seq1.path1;transcripts=comp162383_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106653430	106654325	.	+	.	ID=comp162383_c2_seq1.mrna1;geneID=comp162383_c2_seq1.path1;Name=comp162383_c2_seq1;Dir=indeterminatecoverage=96.8;identity=83.7;matches=688;mismatches=39;indels=95;unknowns=0;Target=comp162383_c2_seq1 454 404 .;locus=RLOC_00020282
Chr2	stalkie_big_nohaplotig	exon	106653430	106654022	85	+	.	Parent=comp162383_c2_seq1.mrna1;Target=comp162383_c2_seq1 571 1 .
Chr2	stalkie_big_nohaplotig	exon	106654147	106654325	78	+	.	Parent=comp162383_c2_seq1.mrna1;Target=comp162383_c2_seq1 777 572 .
Chr2	stalkie_big_nohaplotig	CDS	106653873	106653924	.	+	0	Parent=comp162383_c2_seq1.mrna1
Chr2	gffcl	locus	106657604	106659661	.	+	.	ID=RLOC_00020283;geneIDs=comp163899_c0_seq1.path3;transcripts=comp163899_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	106657604	106659661	.	+	.	ID=comp163899_c0_seq1.mrna3;geneID=comp163899_c0_seq1.path3;Name=comp163899_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.5;matches=2048;mismatches=2;indels=9;unknowns=0;Target=comp163899_c0_seq1 2057 7 .;CDS_Target=comp163899_c0_seq1 542 393 .;locus=RLOC_00020283
Chr2	stalkie_big_nohaplotig	exon	106657604	106659661	99	+	.	Parent=comp163899_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	CDS	106657998	106658146	.	+	0	Parent=comp163899_c0_seq1.mrna3
Chr2	gffcl	locus	106760688	106760736	.	-	.	ID=RLOC_00020287;geneIDs=comp140813_c0_seq1.path1;transcripts=comp140813_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106760688	106760736	.	-	.	ID=comp140813_c0_seq1.mrna1;geneID=comp140813_c0_seq1.path1;Name=comp140813_c0_seq1;Dir=indeterminatecoverage=10.1;identity=100.0;matches=49;mismatches=0;indels=0;unknowns=0;Target=comp140813_c0_seq1 49 1 .;locus=RLOC_00020287
Chr2	stalkie_big_nohaplotig	exon	106760688	106760736	100	-	.	Parent=comp140813_c0_seq1.mrna1
Chr2	gffcl	locus	106783908	106784610	.	-	.	ID=RLOC_00020288;geneIDs=comp158571_c2_seq1.path2;transcripts=comp158571_c2_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	106783908	106784610	.	-	.	ID=comp158571_c2_seq1.mrna2;geneID=comp158571_c2_seq1.path2;Name=comp158571_c2_seq1;Dir=indeterminatecoverage=42.9;identity=97.6;matches=691;mismatches=5;indels=12;unknowns=0;Target=comp158571_c2_seq1 1635 935 .;locus=RLOC_00020288
Chr2	stalkie_big_nohaplotig	exon	106783908	106784610	97	-	.	Parent=comp158571_c2_seq1.mrna2
Chr2	gffcl	locus	106835823	106836860	.	-	.	ID=RLOC_00020289;geneIDs=comp157666_c0_seq1.path1;transcripts=comp157666_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106835823	106836860	.	-	.	ID=comp157666_c0_seq1.mrna1;geneID=comp157666_c0_seq1.path1;Name=comp157666_c0_seq1;Dir=antisensecoverage=99.8;identity=99.8;matches=967;mismatches=2;indels=0;unknowns=0;Target=comp157666_c0_seq1 124 252 .;locus=RLOC_00020289
Chr2	stalkie_big_nohaplotig	exon	106835823	106836520	100	-	.	Parent=comp157666_c0_seq1.mrna1;Target=comp157666_c0_seq1 2 699 -
Chr2	stalkie_big_nohaplotig	exon	106836590	106836860	99	-	.	Parent=comp157666_c0_seq1.mrna1;Target=comp157666_c0_seq1 700 970 -
Chr2	stalkie_big_nohaplotig	CDS	106835945	106836073	.	-	0	Parent=comp157666_c0_seq1.mrna1
Chr2	gffcl	locus	106837475	106838786	.	+	.	ID=RLOC_00020290;geneIDs=FBgn0038565.1.path1;transcripts=FBgn0038565.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106837475	106838786	.	+	.	ID=FBgn0038565.1.mrna1;geneID=FBgn0038565.1.path1;Name=FBgn0038565.1;Dir=sensecoverage=100.0;identity=99.6;matches=1121;mismatches=4;indels=0;unknowns=0;locus=RLOC_00020290
Chr2	stalkie_big_nohaplotig	exon	106837475	106837502	100	+	.	Parent=FBgn0038565.1.mrna1;Target=FBgn0038565.1 1 28 +
Chr2	stalkie_big_nohaplotig	exon	106837565	106837865	100	+	.	Parent=FBgn0038565.1.mrna1;Target=FBgn0038565.1 29 329 +
Chr2	stalkie_big_nohaplotig	exon	106837931	106838102	100	+	.	Parent=FBgn0038565.1.mrna1;Target=FBgn0038565.1 330 501 +
Chr2	stalkie_big_nohaplotig	exon	106838163	106838786	99	+	.	Parent=FBgn0038565.1.mrna1;Target=FBgn0038565.1 502 1125 +
Chr2	stalkie_big_nohaplotig	CDS	106837475	106837502	.	+	0	Parent=FBgn0038565.1.mrna1;Target=FBgn0038565.1 1 28 +
Chr2	stalkie_big_nohaplotig	CDS	106837565	106837865	.	+	2	Parent=FBgn0038565.1.mrna1;Target=FBgn0038565.1 29 329 +
Chr2	stalkie_big_nohaplotig	CDS	106837931	106838102	.	+	1	Parent=FBgn0038565.1.mrna1;Target=FBgn0038565.1 330 501 +
Chr2	stalkie_big_nohaplotig	CDS	106838163	106838786	.	+	0	Parent=FBgn0038565.1.mrna1;Target=FBgn0038565.1 502 1125 +
Chr2	gffcl	locus	106874083	107228676	.	-	.	ID=RLOC_00020291;geneIDs=comp155597_c0_seq1.path1;transcripts=comp155597_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106874083	107228676	.	-	.	ID=comp155597_c0_seq1.mrna1;geneID=comp155597_c0_seq1.path1;Name=comp155597_c0_seq1;Dir=sensecoverage=98.6;identity=99.9;matches=6162;mismatches=9;indels=0;unknowns=0;locus=RLOC_00020291
Chr2	stalkie_big_nohaplotig	exon	106874083	106874093	100	-	.	Parent=comp155597_c0_seq1.mrna1;Target=comp155597_c0_seq1 6169 6179 +
Chr2	stalkie_big_nohaplotig	exon	106881327	106881329	100	-	.	Parent=comp155597_c0_seq1.mrna1;Target=comp155597_c0_seq1 6166 6168 +
Chr2	stalkie_big_nohaplotig	exon	106913066	106913069	100	-	.	Parent=comp155597_c0_seq1.mrna1;Target=comp155597_c0_seq1 6162 6165 +
Chr2	stalkie_big_nohaplotig	exon	106919535	106921143	99	-	.	Parent=comp155597_c0_seq1.mrna1;Target=comp155597_c0_seq1 4553 6161 +
Chr2	stalkie_big_nohaplotig	exon	107224133	107228676	99	-	.	Parent=comp155597_c0_seq1.mrna1;Target=comp155597_c0_seq1 9 4552 +
Chr2	stalkie_big_nohaplotig	CDS	106919783	106921143	.	-	2	Parent=comp155597_c0_seq1.mrna1;Target=comp155597_c0_seq1 4553 5913 +
Chr2	stalkie_big_nohaplotig	CDS	107224133	107226608	.	-	0	Parent=comp155597_c0_seq1.mrna1;Target=comp155597_c0_seq1 2077 4552 +
Chr2	gffcl	locus	106881787	106882307	.	+	.	ID=RLOC_00020292;geneIDs=comp105741_c0_seq1.path1;transcripts=comp105741_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106881787	106882307	.	+	.	ID=comp105741_c0_seq1.mrna1;geneID=comp105741_c0_seq1.path1;Name=comp105741_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=521;mismatches=0;indels=0;unknowns=0;Target=comp105741_c0_seq1 521 1 .;CDS_Target=comp105741_c0_seq1 169 2 .;locus=RLOC_00020292
Chr2	stalkie_big_nohaplotig	exon	106881787	106882307	100	+	.	Parent=comp105741_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	106881788	106881955	.	+	0	Parent=comp105741_c0_seq1.mrna1
Chr2	gffcl	locus	106894003	106899129	.	+	.	ID=RLOC_00020293;geneIDs=comp155543_c0_seq1.path2;transcripts=comp155543_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	106894003	106899129	.	+	.	ID=comp155543_c0_seq1.mrna2;geneID=comp155543_c0_seq1.path2;Name=comp155543_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1955;mismatches=3;indels=2;unknowns=0;Target=comp155543_c0_seq1 76 2 .;locus=RLOC_00020293
Chr2	stalkie_big_nohaplotig	exon	106894003	106895047	99	+	.	Parent=comp155543_c0_seq1.mrna2;Target=comp155543_c0_seq1 1043 1 .
Chr2	stalkie_big_nohaplotig	exon	106898215	106899129	99	+	.	Parent=comp155543_c0_seq1.mrna2;Target=comp155543_c0_seq1 1958 1044 .
Chr2	stalkie_big_nohaplotig	CDS	106894004	106894079	.	+	0	Parent=comp155543_c0_seq1.mrna2
Chr2	gffcl	locus	106894880	106898940	.	-	.	ID=RLOC_00020294;geneIDs=AGAP003894.path1;transcripts=AGAP003894.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106894880	106898940	.	-	.	ID=AGAP003894.mrna1;geneID=AGAP003894.path1;Name=AGAP003894;Dir=indeterminatecoverage=100.0;identity=99.8;matches=892;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020294
Chr2	stalkie_big_nohaplotig	exon	106894880	106895044	100	-	.	Parent=AGAP003894.mrna1;Target=AGAP003894 894 730 .
Chr2	stalkie_big_nohaplotig	exon	106898212	106898940	99	-	.	Parent=AGAP003894.mrna1;Target=AGAP003894 729 1 .
Chr2	stalkie_big_nohaplotig	CDS	106894880	106895044	.	-	0	Parent=AGAP003894.mrna1;Target=AGAP003894 894 730 .
Chr2	stalkie_big_nohaplotig	CDS	106898212	106898940	.	-	0	Parent=AGAP003894.mrna1;Target=AGAP003894 729 1 .
Chr2	gffcl	locus	106968406	106969008	.	+	.	ID=RLOC_00020296;geneIDs=comp156015_c0_seq1.path1;transcripts=comp156015_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	106968406	106969008	.	+	.	ID=comp156015_c0_seq1.mrna1;geneID=comp156015_c0_seq1.path1;Name=comp156015_c0_seq1;Dir=indeterminatecoverage=97.1;identity=97.7;matches=590;mismatches=13;indels=1;unknowns=0;Target=comp156015_c0_seq1 622 19 .;CDS_Target=comp156015_c0_seq1 621 493 .;locus=RLOC_00020296
Chr2	stalkie_big_nohaplotig	exon	106968406	106969008	97	+	.	Parent=comp156015_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	106968879	106969007	.	+	0	Parent=comp156015_c0_seq1.mrna1
Chr2	gffcl	locus	107009461	107011401	.	-	.	ID=RLOC_00020297;geneIDs=comp163611_c0_seq1.path1;transcripts=comp163611_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107009461	107011401	.	-	.	ID=comp163611_c0_seq1.mrna1;geneID=comp163611_c0_seq1.path1;Name=comp163611_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1937;mismatches=4;indels=0;unknowns=0;Target=comp163611_c0_seq1 1941 1 .;locus=RLOC_00020297
Chr2	stalkie_big_nohaplotig	exon	107009461	107011401	99	-	.	Parent=comp163611_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	107009461	107011401	.	-	0	Parent=comp163611_c0_seq1.mrna1
Chr2	gffcl	locus	107034924	107185699	.	-	.	ID=RLOC_00020298;geneIDs=comp153603_c0_seq1.path1;transcripts=comp153603_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107034924	107185699	.	-	.	ID=comp153603_c0_seq1.mrna1;geneID=comp153603_c0_seq1.path1;Name=comp153603_c0_seq1;Dir=indeterminatecoverage=87.8;identity=98.4;matches=499;mismatches=7;indels=1;unknowns=42;Target=comp153603_c0_seq1 421 344 .;locus=RLOC_00020298
Chr2	stalkie_big_nohaplotig	exon	107034924	107034929	100	-	.	Parent=comp153603_c0_seq1.mrna1;Target=comp153603_c0_seq1 552 547 .
Chr2	stalkie_big_nohaplotig	exon	107044267	107044276	100	-	.	Parent=comp153603_c0_seq1.mrna1;Target=comp153603_c0_seq1 546 537 .
Chr2	stalkie_big_nohaplotig	exon	107044805	107044808	100	-	.	Parent=comp153603_c0_seq1.mrna1;Target=comp153603_c0_seq1 536 533 .
Chr2	stalkie_big_nohaplotig	exon	107185172	107185699	98	-	.	Parent=comp153603_c0_seq1.mrna1;Target=comp153603_c0_seq1 532 4 .
Chr2	stalkie_big_nohaplotig	CDS	107185283	107185359	.	-	0	Parent=comp153603_c0_seq1.mrna1
Chr2	gffcl	locus	107065544	107534827	.	+	.	ID=RLOC_00020299;geneIDs=FBgn0003499.1.path1,comp150191_c0_seq1.path1;transcripts=comp150191_c0_seq1.mrna1,FBgn0003499.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107065544	107534827	.	+	.	ID=comp150191_c0_seq1.mrna1;geneID=comp150191_c0_seq1.path1;Name=comp150191_c0_seq1;Dir=antisensecoverage=100.0;identity=97.9;matches=1593;mismatches=30;indels=5;unknowns=37;locus=RLOC_00020299
Chr2	stalkie_big_nohaplotig	exon	107065544	107066290	99	+	.	Parent=comp150191_c0_seq1.mrna1;Target=comp150191_c0_seq1 2173 2919 -
Chr2	stalkie_big_nohaplotig	exon	107068275	107068400	99	+	.	Parent=comp150191_c0_seq1.mrna1;Target=comp150191_c0_seq1 2047 2172 -
Chr2	stalkie_big_nohaplotig	exon	107287342	107287395	45	+	.	Parent=comp150191_c0_seq1.mrna1;Target=comp150191_c0_seq1 1323 1373 -
Chr2	stalkie_big_nohaplotig	exon	107287940	107287948	100	+	.	Parent=comp150191_c0_seq1.mrna1;Target=comp150191_c0_seq1 1165 1173 -
Chr2	stalkie_big_nohaplotig	exon	107287992	107288000	100	+	.	Parent=comp150191_c0_seq1.mrna1;Target=comp150191_c0_seq1 987 995 -
Chr2	stalkie_big_nohaplotig	exon	107288059	107288066	100	+	.	Parent=comp150191_c0_seq1.mrna1;Target=comp150191_c0_seq1 926 933 -
Chr2	stalkie_big_nohaplotig	exon	107288094	107288102	100	+	.	Parent=comp150191_c0_seq1.mrna1;Target=comp150191_c0_seq1 827 835 -
Chr2	stalkie_big_nohaplotig	exon	107293963	107293967	100	+	.	Parent=comp150191_c0_seq1.mrna1;Target=comp150191_c0_seq1 697 701 -
Chr2	stalkie_big_nohaplotig	exon	107534132	107534827	99	+	.	Parent=comp150191_c0_seq1.mrna1;Target=comp150191_c0_seq1 1 696 -
Chr2	stalkie_big_nohaplotig	CDS	107065639	107066290	.	+	0	Parent=comp150191_c0_seq1.mrna1;Target=comp150191_c0_seq1 2173 2824 .
Chr2	stalkie_big_nohaplotig	CDS	107068275	107068400	.	+	2	Parent=comp150191_c0_seq1.mrna1;Target=comp150191_c0_seq1 2047 2172 .
Chr2	stalkie_big_nohaplotig	CDS	107287342	107287395	.	+	2	Parent=comp150191_c0_seq1.mrna1;Target=comp150191_c0_seq1 1323 1373 .
Chr2	stalkie_big_nohaplotig	CDS	107287940	107287948	.	+	2	Parent=comp150191_c0_seq1.mrna1;Target=comp150191_c0_seq1 1165 1173 .
Chr2	stalkie_big_nohaplotig	CDS	107287992	107288000	.	+	2	Parent=comp150191_c0_seq1.mrna1;Target=comp150191_c0_seq1 987 995 .
Chr2	stalkie_big_nohaplotig	CDS	107288059	107288066	.	+	2	Parent=comp150191_c0_seq1.mrna1;Target=comp150191_c0_seq1 926 933 .
Chr2	stalkie_big_nohaplotig	CDS	107288094	107288102	.	+	0	Parent=comp150191_c0_seq1.mrna1;Target=comp150191_c0_seq1 827 835 .
Chr2	stalkie_big_nohaplotig	CDS	107293963	107293967	.	+	0	Parent=comp150191_c0_seq1.mrna1;Target=comp150191_c0_seq1 697 701 .
Chr2	stalkie_big_nohaplotig	CDS	107534132	107534826	.	+	1	Parent=comp150191_c0_seq1.mrna1;Target=comp150191_c0_seq1 2 696 .
Chr2	stalkie_big_nohaplotig	mRNA	107065585	107534826	.	+	.	ID=FBgn0003499.1.mrna1;geneID=FBgn0003499.1.path1;Name=FBgn0003499.1;Dir=sensecoverage=100.0;identity=95.4;matches=1629;mismatches=29;indels=49;unknowns=35;locus=RLOC_00020299
Chr2	stalkie_big_nohaplotig	exon	107065585	107066290	99	+	.	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1 706 +
Chr2	stalkie_big_nohaplotig	exon	107068275	107068400	99	+	.	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 707 832 +
Chr2	stalkie_big_nohaplotig	exon	107481312	107481313	100	+	.	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1024 1025 +
Chr2	stalkie_big_nohaplotig	exon	107484162	107484170	100	+	.	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1026 1034 +
Chr2	stalkie_big_nohaplotig	exon	107484178	107484185	100	+	.	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1087 1094 +
Chr2	stalkie_big_nohaplotig	exon	107496461	107496463	100	+	.	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1107 1109 +
Chr2	stalkie_big_nohaplotig	exon	107503150	107503151	100	+	.	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1110 1111 +
Chr2	stalkie_big_nohaplotig	exon	107509293	107509299	100	+	.	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1112 1118 +
Chr2	stalkie_big_nohaplotig	exon	107513650	107513655	100	+	.	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1119 1124 +
Chr2	stalkie_big_nohaplotig	exon	107513669	107513674	100	+	.	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1182 1187 +
Chr2	stalkie_big_nohaplotig	exon	107527508	107527581	50	+	.	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1188 1290 +
Chr2	stalkie_big_nohaplotig	exon	107527600	107527608	100	+	.	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1331 1339 +
Chr2	stalkie_big_nohaplotig	exon	107527716	107527731	35	+	.	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1346 1379 +
Chr2	stalkie_big_nohaplotig	exon	107528739	107528746	100	+	.	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1444 1451 +
Chr2	stalkie_big_nohaplotig	exon	107528754	107528762	100	+	.	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1474 1482 +
Chr2	stalkie_big_nohaplotig	exon	107528808	107528815	100	+	.	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1536 1543 +
Chr2	stalkie_big_nohaplotig	exon	107534134	107534826	99	+	.	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 2185 2877 +
Chr2	stalkie_big_nohaplotig	CDS	107065585	107066290	.	+	0	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1 706 +
Chr2	stalkie_big_nohaplotig	CDS	107068275	107068400	.	+	2	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 707 832 +
Chr2	stalkie_big_nohaplotig	CDS	107481312	107481313	.	+	2	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1024 1025 +
Chr2	stalkie_big_nohaplotig	CDS	107484162	107484170	.	+	0	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1026 1034 +
Chr2	stalkie_big_nohaplotig	CDS	107484178	107484185	.	+	0	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1087 1094 +
Chr2	stalkie_big_nohaplotig	CDS	107496461	107496463	.	+	1	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1107 1109 +
Chr2	stalkie_big_nohaplotig	CDS	107503150	107503151	.	+	1	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1110 1111 +
Chr2	stalkie_big_nohaplotig	CDS	107509293	107509299	.	+	2	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1112 1118 +
Chr2	stalkie_big_nohaplotig	CDS	107513650	107513655	.	+	1	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1119 1124 +
Chr2	stalkie_big_nohaplotig	CDS	107513669	107513674	.	+	1	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1182 1187 +
Chr2	stalkie_big_nohaplotig	CDS	107527508	107527581	.	+	1	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1188 1290 +
Chr2	stalkie_big_nohaplotig	CDS	107527600	107527608	.	+	2	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1331 1339 +
Chr2	stalkie_big_nohaplotig	CDS	107527716	107527731	.	+	2	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1346 1379 +
Chr2	stalkie_big_nohaplotig	CDS	107528739	107528746	.	+	1	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1444 1451 +
Chr2	stalkie_big_nohaplotig	CDS	107528754	107528762	.	+	2	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1474 1482 +
Chr2	stalkie_big_nohaplotig	CDS	107528808	107528815	.	+	2	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 1536 1543 +
Chr2	stalkie_big_nohaplotig	CDS	107534134	107534826	.	+	0	Parent=FBgn0003499.1.mrna1;Target=FBgn0003499.1 2185 2877 +
Chr2	gffcl	locus	107199127	107201002	.	-	.	ID=RLOC_00020301;geneIDs=comp158558_c0_seq1.path1;transcripts=comp158558_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107199127	107201002	.	-	.	ID=comp158558_c0_seq1.mrna1;geneID=comp158558_c0_seq1.path1;Name=comp158558_c0_seq1;Dir=antisensecoverage=100.0;identity=98.8;matches=1519;mismatches=19;indels=0;unknowns=0;Target=comp158558_c0_seq1 969 1334 .;locus=RLOC_00020301
Chr2	stalkie_big_nohaplotig	exon	107199127	107199688	98	-	.	Parent=comp158558_c0_seq1.mrna1;Target=comp158558_c0_seq1 1 562 -
Chr2	stalkie_big_nohaplotig	exon	107199743	107200582	98	-	.	Parent=comp158558_c0_seq1.mrna1;Target=comp158558_c0_seq1 563 1402 -
Chr2	stalkie_big_nohaplotig	exon	107200867	107201002	98	-	.	Parent=comp158558_c0_seq1.mrna1;Target=comp158558_c0_seq1 1403 1538 -
Chr2	stalkie_big_nohaplotig	CDS	107200149	107200514	.	-	0	Parent=comp158558_c0_seq1.mrna1
Chr2	gffcl	locus	107278245	107279507	.	-	.	ID=RLOC_00020302;geneIDs=FBgn0010292.1.path1;transcripts=FBgn0010292.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107278245	107279507	.	-	.	ID=FBgn0010292.1.mrna1;geneID=FBgn0010292.1.path1;Name=FBgn0010292.1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1251;mismatches=12;indels=0;unknowns=0;Target=FBgn0010292.1 1263 1 .;locus=RLOC_00020302
Chr2	stalkie_big_nohaplotig	exon	107278245	107279507	99	-	.	Parent=FBgn0010292.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	107278245	107279507	.	-	0	Parent=FBgn0010292.1.mrna1
Chr2	gffcl	locus	107326753	107327163	.	-	.	ID=RLOC_00020303;geneIDs=comp134696_c0_seq1.path1;transcripts=comp134696_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107326753	107327163	.	-	.	ID=comp134696_c0_seq1.mrna1;geneID=comp134696_c0_seq1.path1;Name=comp134696_c0_seq1;Dir=indeterminatecoverage=77.2;identity=76.0;matches=361;mismatches=26;indels=88;unknowns=0;Target=comp134696_c0_seq1 584 134 .;CDS_Target=comp134696_c0_seq1 195 136 .;locus=RLOC_00020303
Chr2	stalkie_big_nohaplotig	exon	107326753	107327163	76	-	.	Parent=comp134696_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	107327101	107327161	.	-	0	Parent=comp134696_c0_seq1.mrna1
Chr2	gffcl	locus	107333964	107334725	.	-	.	ID=RLOC_00020304;geneIDs=comp150469_c0_seq1.path1;transcripts=comp150469_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107333964	107334725	.	-	.	ID=comp150469_c0_seq1.mrna1;geneID=comp150469_c0_seq1.path1;Name=comp150469_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=642;mismatches=8;indels=9;unknowns=0;Target=comp150469_c0_seq1 498 367 .;locus=RLOC_00020304
Chr2	stalkie_big_nohaplotig	exon	107333964	107334595	97	-	.	Parent=comp150469_c0_seq1.mrna1;Target=comp150469_c0_seq1 651 27 .
Chr2	stalkie_big_nohaplotig	exon	107334700	107334725	100	-	.	Parent=comp150469_c0_seq1.mrna1;Target=comp150469_c0_seq1 26 1 .
Chr2	stalkie_big_nohaplotig	CDS	107334125	107334256	.	-	0	Parent=comp150469_c0_seq1.mrna1
Chr2	gffcl	locus	107338588	107339185	.	-	.	ID=RLOC_00020305;geneIDs=comp137161_c2_seq1.path1;transcripts=comp137161_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107338588	107339185	.	-	.	ID=comp137161_c2_seq1.mrna1;geneID=comp137161_c2_seq1.path1;Name=comp137161_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=595;mismatches=3;indels=0;unknowns=0;Target=comp137161_c2_seq1 598 1 .;CDS_Target=comp137161_c2_seq1 340 134 .;locus=RLOC_00020305
Chr2	stalkie_big_nohaplotig	exon	107338588	107339185	99	-	.	Parent=comp137161_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	107338846	107339052	.	-	0	Parent=comp137161_c2_seq1.mrna1
Chr2	gffcl	locus	107350461	107352230	.	-	.	ID=RLOC_00020306;geneIDs=comp160464_c4_seq1.path1;transcripts=comp160464_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107350461	107352230	.	-	.	ID=comp160464_c4_seq1.mrna1;geneID=comp160464_c4_seq1.path1;Name=comp160464_c4_seq1;Dir=sensecoverage=62.2;identity=99.9;matches=778;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020306
Chr2	stalkie_big_nohaplotig	exon	107350461	107350635	99	-	.	Parent=comp160464_c4_seq1.mrna1;Target=comp160464_c4_seq1 605 779 +
Chr2	stalkie_big_nohaplotig	exon	107351627	107352230	100	-	.	Parent=comp160464_c4_seq1.mrna1;Target=comp160464_c4_seq1 1 604 +
Chr2	stalkie_big_nohaplotig	CDS	107350461	107350635	.	-	0	Parent=comp160464_c4_seq1.mrna1;Target=comp160464_c4_seq1 605 779 +
Chr2	stalkie_big_nohaplotig	CDS	107351627	107352229	.	-	0	Parent=comp160464_c4_seq1.mrna1;Target=comp160464_c4_seq1 2 604 +
Chr2	gffcl	locus	107366045	107368222	.	+	.	ID=RLOC_00020307;geneIDs=FBgn0032634.1.path1;transcripts=FBgn0032634.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107366045	107368222	.	+	.	ID=FBgn0032634.1.mrna1;geneID=FBgn0032634.1.path1;Name=FBgn0032634.1;Dir=sensecoverage=100.0;identity=98.9;matches=347;mismatches=4;indels=0;unknowns=0;locus=RLOC_00020307
Chr2	stalkie_big_nohaplotig	exon	107366045	107366097	96	+	.	Parent=FBgn0032634.1.mrna1;Target=FBgn0032634.1 1 53 +
Chr2	stalkie_big_nohaplotig	exon	107366148	107366237	100	+	.	Parent=FBgn0032634.1.mrna1;Target=FBgn0032634.1 54 143 +
Chr2	stalkie_big_nohaplotig	exon	107366302	107366476	98	+	.	Parent=FBgn0032634.1.mrna1;Target=FBgn0032634.1 144 318 +
Chr2	stalkie_big_nohaplotig	exon	107368190	107368222	100	+	.	Parent=FBgn0032634.1.mrna1;Target=FBgn0032634.1 319 351 +
Chr2	stalkie_big_nohaplotig	CDS	107366045	107366097	.	+	0	Parent=FBgn0032634.1.mrna1;Target=FBgn0032634.1 1 53 +
Chr2	stalkie_big_nohaplotig	CDS	107366148	107366237	.	+	1	Parent=FBgn0032634.1.mrna1;Target=FBgn0032634.1 54 143 +
Chr2	stalkie_big_nohaplotig	CDS	107366302	107366476	.	+	1	Parent=FBgn0032634.1.mrna1;Target=FBgn0032634.1 144 318 +
Chr2	stalkie_big_nohaplotig	CDS	107368190	107368222	.	+	0	Parent=FBgn0032634.1.mrna1;Target=FBgn0032634.1 319 351 +
Chr2	gffcl	locus	107370598	107375440	.	+	.	ID=RLOC_00020308;geneIDs=FBgn0037894.1.path1;transcripts=FBgn0037894.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107370598	107375440	.	+	.	ID=FBgn0037894.1.mrna1;geneID=FBgn0037894.1.path1;Name=FBgn0037894.1;Dir=sensecoverage=100.0;identity=99.9;matches=3084;mismatches=3;indels=0;unknowns=0;locus=RLOC_00020308
Chr2	stalkie_big_nohaplotig	exon	107370598	107370739	100	+	.	Parent=FBgn0037894.1.mrna1;Target=FBgn0037894.1 1 142 +
Chr2	stalkie_big_nohaplotig	exon	107370803	107371453	100	+	.	Parent=FBgn0037894.1.mrna1;Target=FBgn0037894.1 143 793 +
Chr2	stalkie_big_nohaplotig	exon	107371523	107371827	100	+	.	Parent=FBgn0037894.1.mrna1;Target=FBgn0037894.1 794 1098 +
Chr2	stalkie_big_nohaplotig	exon	107371889	107372002	100	+	.	Parent=FBgn0037894.1.mrna1;Target=FBgn0037894.1 1099 1212 +
Chr2	stalkie_big_nohaplotig	exon	107373366	107373751	100	+	.	Parent=FBgn0037894.1.mrna1;Target=FBgn0037894.1 1213 1598 +
Chr2	stalkie_big_nohaplotig	exon	107373820	107373985	100	+	.	Parent=FBgn0037894.1.mrna1;Target=FBgn0037894.1 1599 1764 +
Chr2	stalkie_big_nohaplotig	exon	107374056	107374841	100	+	.	Parent=FBgn0037894.1.mrna1;Target=FBgn0037894.1 1765 2550 +
Chr2	stalkie_big_nohaplotig	exon	107374904	107375440	99	+	.	Parent=FBgn0037894.1.mrna1;Target=FBgn0037894.1 2551 3087 +
Chr2	stalkie_big_nohaplotig	CDS	107370598	107370739	.	+	0	Parent=FBgn0037894.1.mrna1;Target=FBgn0037894.1 1 142 +
Chr2	stalkie_big_nohaplotig	CDS	107370803	107371453	.	+	2	Parent=FBgn0037894.1.mrna1;Target=FBgn0037894.1 143 793 +
Chr2	stalkie_big_nohaplotig	CDS	107371523	107371827	.	+	2	Parent=FBgn0037894.1.mrna1;Target=FBgn0037894.1 794 1098 +
Chr2	stalkie_big_nohaplotig	CDS	107371889	107372002	.	+	0	Parent=FBgn0037894.1.mrna1;Target=FBgn0037894.1 1099 1212 +
Chr2	stalkie_big_nohaplotig	CDS	107373366	107373751	.	+	0	Parent=FBgn0037894.1.mrna1;Target=FBgn0037894.1 1213 1598 +
Chr2	stalkie_big_nohaplotig	CDS	107373820	107373985	.	+	1	Parent=FBgn0037894.1.mrna1;Target=FBgn0037894.1 1599 1764 +
Chr2	stalkie_big_nohaplotig	CDS	107374056	107374841	.	+	0	Parent=FBgn0037894.1.mrna1;Target=FBgn0037894.1 1765 2550 +
Chr2	stalkie_big_nohaplotig	CDS	107374904	107375440	.	+	0	Parent=FBgn0037894.1.mrna1;Target=FBgn0037894.1 2551 3087 +
Chr2	gffcl	locus	107376981	107384251	.	-	.	ID=RLOC_00020309;geneIDs=FBgn0037607.1.path1;transcripts=FBgn0037607.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107376981	107384251	.	-	.	ID=FBgn0037607.1.mrna1;geneID=FBgn0037607.1.path1;Name=FBgn0037607.1;Dir=sensecoverage=100.0;identity=99.6;matches=2190;mismatches=9;indels=0;unknowns=0;locus=RLOC_00020309
Chr2	stalkie_big_nohaplotig	exon	107376981	107377155	100	-	.	Parent=FBgn0037607.1.mrna1;Target=FBgn0037607.1 2025 2199 +
Chr2	stalkie_big_nohaplotig	exon	107377224	107378492	99	-	.	Parent=FBgn0037607.1.mrna1;Target=FBgn0037607.1 756 2024 +
Chr2	stalkie_big_nohaplotig	exon	107378565	107378900	100	-	.	Parent=FBgn0037607.1.mrna1;Target=FBgn0037607.1 420 755 +
Chr2	stalkie_big_nohaplotig	exon	107383833	107384251	99	-	.	Parent=FBgn0037607.1.mrna1;Target=FBgn0037607.1 1 419 +
Chr2	stalkie_big_nohaplotig	CDS	107376981	107377155	.	-	1	Parent=FBgn0037607.1.mrna1;Target=FBgn0037607.1 2025 2199 +
Chr2	stalkie_big_nohaplotig	CDS	107377224	107378492	.	-	1	Parent=FBgn0037607.1.mrna1;Target=FBgn0037607.1 756 2024 +
Chr2	stalkie_big_nohaplotig	CDS	107378565	107378900	.	-	1	Parent=FBgn0037607.1.mrna1;Target=FBgn0037607.1 420 755 +
Chr2	stalkie_big_nohaplotig	CDS	107383833	107384251	.	-	0	Parent=FBgn0037607.1.mrna1;Target=FBgn0037607.1 1 419 +
Chr2	gffcl	locus	107413185	107415542	.	+	.	ID=RLOC_00020312;geneIDs=FBgn0038569.2.path1;transcripts=FBgn0038569.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107413185	107415542	.	+	.	ID=FBgn0038569.2.mrna1;geneID=FBgn0038569.2.path1;Name=FBgn0038569.2;Dir=sensecoverage=100.0;identity=99.9;matches=2229;mismatches=3;indels=0;unknowns=0;locus=RLOC_00020312
Chr2	stalkie_big_nohaplotig	exon	107413185	107413626	100	+	.	Parent=FBgn0038569.2.mrna1;Target=FBgn0038569.2 1 442 +
Chr2	stalkie_big_nohaplotig	exon	107413700	107414298	99	+	.	Parent=FBgn0038569.2.mrna1;Target=FBgn0038569.2 443 1041 +
Chr2	stalkie_big_nohaplotig	exon	107414352	107415542	99	+	.	Parent=FBgn0038569.2.mrna1;Target=FBgn0038569.2 1042 2232 +
Chr2	stalkie_big_nohaplotig	CDS	107413185	107413626	.	+	0	Parent=FBgn0038569.2.mrna1;Target=FBgn0038569.2 1 442 +
Chr2	stalkie_big_nohaplotig	CDS	107413700	107414298	.	+	2	Parent=FBgn0038569.2.mrna1;Target=FBgn0038569.2 443 1041 +
Chr2	stalkie_big_nohaplotig	CDS	107414352	107415542	.	+	0	Parent=FBgn0038569.2.mrna1;Target=FBgn0038569.2 1042 2232 +
Chr2	gffcl	locus	107568174	107569873	.	-	.	ID=RLOC_00020314;geneIDs=comp154486_c1_seq1.path1;transcripts=comp154486_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107568174	107569873	.	-	.	ID=comp154486_c1_seq1.mrna1;geneID=comp154486_c1_seq1.path1;Name=comp154486_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1615;mismatches=9;indels=4;unknowns=0;Target=comp154486_c1_seq1 597 265 .;locus=RLOC_00020314
Chr2	stalkie_big_nohaplotig	exon	107568174	107569752	99	-	.	Parent=comp154486_c1_seq1.mrna1;Target=comp154486_c1_seq1 1628 46 .
Chr2	stalkie_big_nohaplotig	exon	107569829	107569873	95	-	.	Parent=comp154486_c1_seq1.mrna1;Target=comp154486_c1_seq1 45 1 .
Chr2	stalkie_big_nohaplotig	CDS	107569201	107569533	.	-	0	Parent=comp154486_c1_seq1.mrna1
Chr2	gffcl	locus	107653480	108369360	.	-	.	ID=RLOC_00020315;geneIDs=FBgn0024804.2.path1,comp159198_c0_seq1.path1;transcripts=comp159198_c0_seq1.mrna1,FBgn0024804.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107653480	108369303	.	-	.	ID=comp159198_c0_seq1.mrna1;geneID=comp159198_c0_seq1.path1;Name=comp159198_c0_seq1;Dir=indeterminatecoverage=79.9;identity=99.2;matches=1529;mismatches=5;indels=7;unknowns=0;locus=RLOC_00020315
Chr2	stalkie_big_nohaplotig	exon	107653480	107653511	69	-	.	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 1776 1738 .
Chr2	stalkie_big_nohaplotig	exon	107658630	107658632	100	-	.	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 1737 1735 .
Chr2	stalkie_big_nohaplotig	exon	107664977	107664984	100	-	.	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 1734 1727 .
Chr2	stalkie_big_nohaplotig	exon	107666442	107666450	100	-	.	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 1726 1718 .
Chr2	stalkie_big_nohaplotig	exon	107670549	107670551	100	-	.	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 1717 1715 .
Chr2	stalkie_big_nohaplotig	exon	107670582	107670589	100	-	.	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 1657 1650 .
Chr2	stalkie_big_nohaplotig	exon	107676748	107676755	100	-	.	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 1649 1642 .
Chr2	stalkie_big_nohaplotig	exon	108365036	108365199	100	-	.	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 1462 1299 .
Chr2	stalkie_big_nohaplotig	exon	108365262	108365397	100	-	.	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 1298 1163 .
Chr2	stalkie_big_nohaplotig	exon	108365451	108365552	100	-	.	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 1162 1061 .
Chr2	stalkie_big_nohaplotig	exon	108365609	108365786	100	-	.	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 1060 883 .
Chr2	stalkie_big_nohaplotig	exon	108367723	108367837	100	-	.	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 882 768 .
Chr2	stalkie_big_nohaplotig	exon	108368401	108368596	100	-	.	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 767 572 .
Chr2	stalkie_big_nohaplotig	exon	108368659	108368778	100	-	.	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 571 452 .
Chr2	stalkie_big_nohaplotig	exon	108368853	108369303	100	-	.	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 451 1 .
Chr2	stalkie_big_nohaplotig	CDS	107670549	107670551	.	-	0	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 1717 1715 .
Chr2	stalkie_big_nohaplotig	CDS	107670582	107670589	.	-	2	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 1657 1650 .
Chr2	stalkie_big_nohaplotig	CDS	107676748	107676755	.	-	1	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 1649 1642 .
Chr2	stalkie_big_nohaplotig	CDS	108365036	108365199	.	-	0	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 1462 1299 .
Chr2	stalkie_big_nohaplotig	CDS	108365262	108365397	.	-	1	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 1298 1163 .
Chr2	stalkie_big_nohaplotig	CDS	108365451	108365552	.	-	1	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 1162 1061 .
Chr2	stalkie_big_nohaplotig	CDS	108365609	108365786	.	-	2	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 1060 883 .
Chr2	stalkie_big_nohaplotig	CDS	108367723	108367837	.	-	0	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 882 768 .
Chr2	stalkie_big_nohaplotig	CDS	108368401	108368596	.	-	1	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 767 572 .
Chr2	stalkie_big_nohaplotig	CDS	108368659	108368778	.	-	1	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 571 452 .
Chr2	stalkie_big_nohaplotig	CDS	108368853	108368929	.	-	0	Parent=comp159198_c0_seq1.mrna1;Target=comp159198_c0_seq1 451 375 .
Chr2	stalkie_big_nohaplotig	mRNA	108365037	108369360	.	-	.	ID=FBgn0024804.2.mrna1;geneID=FBgn0024804.2.path1;Name=FBgn0024804.2;Dir=sensecoverage=81.1;identity=100.0;matches=1090;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020315
Chr2	stalkie_big_nohaplotig	exon	108365037	108365199	100	-	.	Parent=FBgn0024804.2.mrna1;Target=FBgn0024804.2 928 1090 +
Chr2	stalkie_big_nohaplotig	exon	108365262	108365397	100	-	.	Parent=FBgn0024804.2.mrna1;Target=FBgn0024804.2 792 927 +
Chr2	stalkie_big_nohaplotig	exon	108365451	108365552	100	-	.	Parent=FBgn0024804.2.mrna1;Target=FBgn0024804.2 690 791 +
Chr2	stalkie_big_nohaplotig	exon	108365609	108365786	100	-	.	Parent=FBgn0024804.2.mrna1;Target=FBgn0024804.2 512 689 +
Chr2	stalkie_big_nohaplotig	exon	108367723	108367837	100	-	.	Parent=FBgn0024804.2.mrna1;Target=FBgn0024804.2 397 511 +
Chr2	stalkie_big_nohaplotig	exon	108368401	108368596	100	-	.	Parent=FBgn0024804.2.mrna1;Target=FBgn0024804.2 201 396 +
Chr2	stalkie_big_nohaplotig	exon	108368659	108368778	100	-	.	Parent=FBgn0024804.2.mrna1;Target=FBgn0024804.2 81 200 +
Chr2	stalkie_big_nohaplotig	exon	108369281	108369360	100	-	.	Parent=FBgn0024804.2.mrna1;Target=FBgn0024804.2 1 80 +
Chr2	stalkie_big_nohaplotig	CDS	108365037	108365199	.	-	0	Parent=FBgn0024804.2.mrna1;Target=FBgn0024804.2 928 1090 +
Chr2	stalkie_big_nohaplotig	CDS	108365262	108365397	.	-	1	Parent=FBgn0024804.2.mrna1;Target=FBgn0024804.2 792 927 +
Chr2	stalkie_big_nohaplotig	CDS	108365451	108365552	.	-	1	Parent=FBgn0024804.2.mrna1;Target=FBgn0024804.2 690 791 +
Chr2	stalkie_big_nohaplotig	CDS	108365609	108365786	.	-	2	Parent=FBgn0024804.2.mrna1;Target=FBgn0024804.2 512 689 +
Chr2	stalkie_big_nohaplotig	CDS	108367723	108367837	.	-	0	Parent=FBgn0024804.2.mrna1;Target=FBgn0024804.2 397 511 +
Chr2	stalkie_big_nohaplotig	CDS	108368401	108368596	.	-	1	Parent=FBgn0024804.2.mrna1;Target=FBgn0024804.2 201 396 +
Chr2	stalkie_big_nohaplotig	CDS	108368659	108368778	.	-	1	Parent=FBgn0024804.2.mrna1;Target=FBgn0024804.2 81 200 +
Chr2	stalkie_big_nohaplotig	CDS	108369281	108369360	.	-	0	Parent=FBgn0024804.2.mrna1;Target=FBgn0024804.2 1 80 +
Chr2	gffcl	locus	107701661	107703963	.	+	.	ID=RLOC_00020316;geneIDs=comp156507_c0_seq1.path1;transcripts=comp156507_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107701661	107703963	.	+	.	ID=comp156507_c0_seq1.mrna1;geneID=comp156507_c0_seq1.path1;Name=comp156507_c0_seq1;Dir=indeterminatecoverage=99.7;identity=94.0;matches=2204;mismatches=75;indels=66;unknowns=0;Target=comp156507_c0_seq1 2328 8 .;CDS_Target=comp156507_c0_seq1 921 679 .;locus=RLOC_00020316
Chr2	stalkie_big_nohaplotig	exon	107701661	107703963	93	+	.	Parent=comp156507_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	107702324	107702546	.	+	0	Parent=comp156507_c0_seq1.mrna1
Chr2	gffcl	locus	107704154	107704609	.	+	.	ID=RLOC_00020317;geneIDs=comp117049_c0_seq1.path1;transcripts=comp117049_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107704154	107704609	.	+	.	ID=comp117049_c0_seq1.mrna1;geneID=comp117049_c0_seq1.path1;Name=comp117049_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=456;mismatches=0;indels=0;unknowns=0;Target=comp117049_c0_seq1 456 1 .;CDS_Target=comp117049_c0_seq1 37 2 .;locus=RLOC_00020317
Chr2	stalkie_big_nohaplotig	exon	107704154	107704609	100	+	.	Parent=comp117049_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	107704155	107704190	.	+	0	Parent=comp117049_c0_seq1.mrna1
Chr2	gffcl	locus	107718134	107718764	.	-	.	ID=RLOC_00020318;geneIDs=comp152538_c0_seq1.path1;transcripts=comp152538_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107718134	107718764	.	-	.	ID=comp152538_c0_seq1.mrna1;geneID=comp152538_c0_seq1.path1;Name=comp152538_c0_seq1;Dir=antisensecoverage=99.4;identity=98.5;matches=510;mismatches=8;indels=0;unknowns=0;locus=RLOC_00020318
Chr2	stalkie_big_nohaplotig	exon	107718134	107718294	98	-	.	Parent=comp152538_c0_seq1.mrna1;Target=comp152538_c0_seq1 3 163 -
Chr2	stalkie_big_nohaplotig	exon	107718352	107718508	99	-	.	Parent=comp152538_c0_seq1.mrna1;Target=comp152538_c0_seq1 164 320 -
Chr2	stalkie_big_nohaplotig	exon	107718565	107718764	98	-	.	Parent=comp152538_c0_seq1.mrna1;Target=comp152538_c0_seq1 321 520 -
Chr2	stalkie_big_nohaplotig	CDS	107718202	107718294	.	-	0	Parent=comp152538_c0_seq1.mrna1;Target=comp152538_c0_seq1 71 163 .
Chr2	stalkie_big_nohaplotig	CDS	107718352	107718508	.	-	1	Parent=comp152538_c0_seq1.mrna1;Target=comp152538_c0_seq1 164 320 .
Chr2	stalkie_big_nohaplotig	CDS	107718565	107718656	.	-	0	Parent=comp152538_c0_seq1.mrna1;Target=comp152538_c0_seq1 321 412 .
Chr2	gffcl	locus	107742273	107762135	.	+	.	ID=RLOC_00020319;geneIDs=FBgn0039186.1.path1;transcripts=FBgn0039186.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107742273	107762135	.	+	.	ID=FBgn0039186.1.mrna1;geneID=FBgn0039186.1.path1;Name=FBgn0039186.1;Dir=sensecoverage=100.0;identity=99.9;matches=1382;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020319
Chr2	stalkie_big_nohaplotig	exon	107742273	107742498	100	+	.	Parent=FBgn0039186.1.mrna1;Target=FBgn0039186.1 1 226 +
Chr2	stalkie_big_nohaplotig	exon	107742924	107743043	100	+	.	Parent=FBgn0039186.1.mrna1;Target=FBgn0039186.1 227 346 +
Chr2	stalkie_big_nohaplotig	exon	107743111	107743729	100	+	.	Parent=FBgn0039186.1.mrna1;Target=FBgn0039186.1 347 965 +
Chr2	stalkie_big_nohaplotig	exon	107743799	107744005	99	+	.	Parent=FBgn0039186.1.mrna1;Target=FBgn0039186.1 966 1172 +
Chr2	stalkie_big_nohaplotig	exon	107744066	107744229	100	+	.	Parent=FBgn0039186.1.mrna1;Target=FBgn0039186.1 1173 1336 +
Chr2	stalkie_big_nohaplotig	exon	107762089	107762135	100	+	.	Parent=FBgn0039186.1.mrna1;Target=FBgn0039186.1 1337 1383 +
Chr2	stalkie_big_nohaplotig	CDS	107742273	107742498	.	+	0	Parent=FBgn0039186.1.mrna1;Target=FBgn0039186.1 1 226 +
Chr2	stalkie_big_nohaplotig	CDS	107742924	107743043	.	+	2	Parent=FBgn0039186.1.mrna1;Target=FBgn0039186.1 227 346 +
Chr2	stalkie_big_nohaplotig	CDS	107743111	107743729	.	+	2	Parent=FBgn0039186.1.mrna1;Target=FBgn0039186.1 347 965 +
Chr2	stalkie_big_nohaplotig	CDS	107743799	107744005	.	+	1	Parent=FBgn0039186.1.mrna1;Target=FBgn0039186.1 966 1172 +
Chr2	stalkie_big_nohaplotig	CDS	107744066	107744229	.	+	1	Parent=FBgn0039186.1.mrna1;Target=FBgn0039186.1 1173 1336 +
Chr2	stalkie_big_nohaplotig	CDS	107762089	107762135	.	+	2	Parent=FBgn0039186.1.mrna1;Target=FBgn0039186.1 1337 1383 +
Chr2	gffcl	locus	107763037	107763360	.	+	.	ID=RLOC_00020320;geneIDs=comp118678_c0_seq1.path1;transcripts=comp118678_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107763037	107763360	.	+	.	ID=comp118678_c0_seq1.mrna1;geneID=comp118678_c0_seq1.path1;Name=comp118678_c0_seq1;Dir=indeterminatecoverage=98.8;identity=100.0;matches=324;mismatches=0;indels=0;unknowns=0;Target=comp118678_c0_seq1 328 5 .;CDS_Target=comp118678_c0_seq1 189 7 .;locus=RLOC_00020320
Chr2	stalkie_big_nohaplotig	exon	107763037	107763360	100	+	.	Parent=comp118678_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	107763039	107763221	.	+	0	Parent=comp118678_c0_seq1.mrna1
Chr2	gffcl	locus	107767918	107769145	.	+	.	ID=RLOC_00020321;geneIDs=comp157298_c1_seq1.path1;transcripts=comp157298_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107767918	107769145	.	+	.	ID=comp157298_c1_seq1.mrna1;geneID=comp157298_c1_seq1.path1;Name=comp157298_c1_seq1;Dir=indeterminatecoverage=99.3;identity=97.3;matches=1209;mismatches=19;indels=14;unknowns=0;Target=comp157298_c1_seq1 1251 10 .;CDS_Target=comp157298_c1_seq1 248 12 .;locus=RLOC_00020321
Chr2	stalkie_big_nohaplotig	exon	107767918	107769145	97	+	.	Parent=comp157298_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	107767920	107768156	.	+	0	Parent=comp157298_c1_seq1.mrna1
Chr2	gffcl	locus	107775105	107782476	.	-	.	ID=RLOC_00020322;geneIDs=FBgn0011581.1.path1;transcripts=FBgn0011581.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107775105	107782476	.	-	.	ID=FBgn0011581.1.mrna1;geneID=FBgn0011581.1.path1;Name=FBgn0011581.1;Dir=sensecoverage=100.0;identity=100.0;matches=336;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020322
Chr2	stalkie_big_nohaplotig	exon	107775105	107775196	100	-	.	Parent=FBgn0011581.1.mrna1;Target=FBgn0011581.1 245 336 +
Chr2	stalkie_big_nohaplotig	exon	107775365	107775573	100	-	.	Parent=FBgn0011581.1.mrna1;Target=FBgn0011581.1 36 244 +
Chr2	stalkie_big_nohaplotig	exon	107782442	107782476	100	-	.	Parent=FBgn0011581.1.mrna1;Target=FBgn0011581.1 1 35 +
Chr2	stalkie_big_nohaplotig	CDS	107775105	107775196	.	-	2	Parent=FBgn0011581.1.mrna1;Target=FBgn0011581.1 245 336 +
Chr2	stalkie_big_nohaplotig	CDS	107775365	107775573	.	-	1	Parent=FBgn0011581.1.mrna1;Target=FBgn0011581.1 36 244 +
Chr2	stalkie_big_nohaplotig	CDS	107782442	107782476	.	-	0	Parent=FBgn0011581.1.mrna1;Target=FBgn0011581.1 1 35 +
Chr2	gffcl	locus	107789637	107790076	.	+	.	ID=RLOC_00020323;geneIDs=comp1794833_c0_seq1.path1;transcripts=comp1794833_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107789637	107790076	.	+	.	ID=comp1794833_c0_seq1.mrna1;geneID=comp1794833_c0_seq1.path1;Name=comp1794833_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.5;matches=438;mismatches=2;indels=0;unknowns=0;Target=comp1794833_c0_seq1 444 5 .;CDS_Target=comp1794833_c0_seq1 442 287 .;locus=RLOC_00020323
Chr2	stalkie_big_nohaplotig	exon	107789637	107790076	99	+	.	Parent=comp1794833_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	107789919	107790074	.	+	0	Parent=comp1794833_c0_seq1.mrna1
Chr2	gffcl	locus	107791503	107804827	.	-	.	ID=RLOC_00020324;geneIDs=FBgn0039184.1.path1;transcripts=FBgn0039184.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107791503	107804827	.	-	.	ID=FBgn0039184.1.mrna1;geneID=FBgn0039184.1.path1;Name=FBgn0039184.1;Dir=sensecoverage=100.0;identity=99.6;matches=2014;mismatches=8;indels=0;unknowns=0;locus=RLOC_00020324
Chr2	stalkie_big_nohaplotig	exon	107791503	107792009	99	-	.	Parent=FBgn0039184.1.mrna1;Target=FBgn0039184.1 1516 2022 +
Chr2	stalkie_big_nohaplotig	exon	107795863	107796008	99	-	.	Parent=FBgn0039184.1.mrna1;Target=FBgn0039184.1 1370 1515 +
Chr2	stalkie_big_nohaplotig	exon	107796074	107796384	99	-	.	Parent=FBgn0039184.1.mrna1;Target=FBgn0039184.1 1059 1369 +
Chr2	stalkie_big_nohaplotig	exon	107796437	107796490	100	-	.	Parent=FBgn0039184.1.mrna1;Target=FBgn0039184.1 1005 1058 +
Chr2	stalkie_big_nohaplotig	exon	107796852	107797480	99	-	.	Parent=FBgn0039184.1.mrna1;Target=FBgn0039184.1 376 1004 +
Chr2	stalkie_big_nohaplotig	exon	107797541	107797842	100	-	.	Parent=FBgn0039184.1.mrna1;Target=FBgn0039184.1 74 375 +
Chr2	stalkie_big_nohaplotig	exon	107804755	107804827	100	-	.	Parent=FBgn0039184.1.mrna1;Target=FBgn0039184.1 1 73 +
Chr2	stalkie_big_nohaplotig	CDS	107791503	107792009	.	-	0	Parent=FBgn0039184.1.mrna1;Target=FBgn0039184.1 1516 2022 +
Chr2	stalkie_big_nohaplotig	CDS	107795863	107796008	.	-	2	Parent=FBgn0039184.1.mrna1;Target=FBgn0039184.1 1370 1515 +
Chr2	stalkie_big_nohaplotig	CDS	107796074	107796384	.	-	1	Parent=FBgn0039184.1.mrna1;Target=FBgn0039184.1 1059 1369 +
Chr2	stalkie_big_nohaplotig	CDS	107796437	107796490	.	-	1	Parent=FBgn0039184.1.mrna1;Target=FBgn0039184.1 1005 1058 +
Chr2	stalkie_big_nohaplotig	CDS	107796852	107797480	.	-	0	Parent=FBgn0039184.1.mrna1;Target=FBgn0039184.1 376 1004 +
Chr2	stalkie_big_nohaplotig	CDS	107797541	107797842	.	-	2	Parent=FBgn0039184.1.mrna1;Target=FBgn0039184.1 74 375 +
Chr2	stalkie_big_nohaplotig	CDS	107804755	107804827	.	-	0	Parent=FBgn0039184.1.mrna1;Target=FBgn0039184.1 1 73 +
Chr2	gffcl	locus	107805444	107809534	.	-	.	ID=RLOC_00020325;geneIDs=FBgn0039183.1.path1;transcripts=FBgn0039183.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107805444	107809534	.	-	.	ID=FBgn0039183.1.mrna1;geneID=FBgn0039183.1.path1;Name=FBgn0039183.1;Dir=sensecoverage=100.0;identity=99.8;matches=2950;mismatches=5;indels=0;unknowns=0;locus=RLOC_00020325
Chr2	stalkie_big_nohaplotig	exon	107805444	107805680	100	-	.	Parent=FBgn0039183.1.mrna1;Target=FBgn0039183.1 2719 2955 +
Chr2	stalkie_big_nohaplotig	exon	107805753	107805891	100	-	.	Parent=FBgn0039183.1.mrna1;Target=FBgn0039183.1 2580 2718 +
Chr2	stalkie_big_nohaplotig	exon	107806333	107806536	99	-	.	Parent=FBgn0039183.1.mrna1;Target=FBgn0039183.1 2376 2579 +
Chr2	stalkie_big_nohaplotig	exon	107806600	107807064	100	-	.	Parent=FBgn0039183.1.mrna1;Target=FBgn0039183.1 1911 2375 +
Chr2	stalkie_big_nohaplotig	exon	107807142	107807638	100	-	.	Parent=FBgn0039183.1.mrna1;Target=FBgn0039183.1 1414 1910 +
Chr2	stalkie_big_nohaplotig	exon	107807731	107808306	99	-	.	Parent=FBgn0039183.1.mrna1;Target=FBgn0039183.1 838 1413 +
Chr2	stalkie_big_nohaplotig	exon	107808370	107808814	100	-	.	Parent=FBgn0039183.1.mrna1;Target=FBgn0039183.1 393 837 +
Chr2	stalkie_big_nohaplotig	exon	107809085	107809413	100	-	.	Parent=FBgn0039183.1.mrna1;Target=FBgn0039183.1 64 392 +
Chr2	stalkie_big_nohaplotig	exon	107809472	107809534	100	-	.	Parent=FBgn0039183.1.mrna1;Target=FBgn0039183.1 1 63 +
Chr2	stalkie_big_nohaplotig	CDS	107805444	107805680	.	-	0	Parent=FBgn0039183.1.mrna1;Target=FBgn0039183.1 2719 2955 +
Chr2	stalkie_big_nohaplotig	CDS	107805753	107805891	.	-	1	Parent=FBgn0039183.1.mrna1;Target=FBgn0039183.1 2580 2718 +
Chr2	stalkie_big_nohaplotig	CDS	107806333	107806536	.	-	1	Parent=FBgn0039183.1.mrna1;Target=FBgn0039183.1 2376 2579 +
Chr2	stalkie_big_nohaplotig	CDS	107806600	107807064	.	-	1	Parent=FBgn0039183.1.mrna1;Target=FBgn0039183.1 1911 2375 +
Chr2	stalkie_big_nohaplotig	CDS	107807142	107807638	.	-	0	Parent=FBgn0039183.1.mrna1;Target=FBgn0039183.1 1414 1910 +
Chr2	stalkie_big_nohaplotig	CDS	107807731	107808306	.	-	0	Parent=FBgn0039183.1.mrna1;Target=FBgn0039183.1 838 1413 +
Chr2	stalkie_big_nohaplotig	CDS	107808370	107808814	.	-	1	Parent=FBgn0039183.1.mrna1;Target=FBgn0039183.1 393 837 +
Chr2	stalkie_big_nohaplotig	CDS	107809085	107809413	.	-	0	Parent=FBgn0039183.1.mrna1;Target=FBgn0039183.1 64 392 +
Chr2	stalkie_big_nohaplotig	CDS	107809472	107809534	.	-	0	Parent=FBgn0039183.1.mrna1;Target=FBgn0039183.1 1 63 +
Chr2	gffcl	locus	107811047	107817845	.	+	.	ID=RLOC_00020326;geneIDs=FBgn0039182.1.path1;transcripts=FBgn0039182.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107811047	107817845	.	+	.	ID=FBgn0039182.1.mrna1;geneID=FBgn0039182.1.path1;Name=FBgn0039182.1;Dir=sensecoverage=100.0;identity=99.8;matches=4450;mismatches=8;indels=0;unknowns=0;locus=RLOC_00020326
Chr2	stalkie_big_nohaplotig	exon	107811047	107811136	100	+	.	Parent=FBgn0039182.1.mrna1;Target=FBgn0039182.1 1 90 +
Chr2	stalkie_big_nohaplotig	exon	107811198	107812527	99	+	.	Parent=FBgn0039182.1.mrna1;Target=FBgn0039182.1 91 1420 +
Chr2	stalkie_big_nohaplotig	exon	107813856	107814798	99	+	.	Parent=FBgn0039182.1.mrna1;Target=FBgn0039182.1 1421 2363 +
Chr2	stalkie_big_nohaplotig	exon	107814870	107816638	99	+	.	Parent=FBgn0039182.1.mrna1;Target=FBgn0039182.1 2364 4132 +
Chr2	stalkie_big_nohaplotig	exon	107816700	107816865	100	+	.	Parent=FBgn0039182.1.mrna1;Target=FBgn0039182.1 4133 4298 +
Chr2	stalkie_big_nohaplotig	exon	107817686	107817845	99	+	.	Parent=FBgn0039182.1.mrna1;Target=FBgn0039182.1 4299 4458 +
Chr2	stalkie_big_nohaplotig	CDS	107811047	107811136	.	+	0	Parent=FBgn0039182.1.mrna1;Target=FBgn0039182.1 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	107811198	107812527	.	+	0	Parent=FBgn0039182.1.mrna1;Target=FBgn0039182.1 91 1420 +
Chr2	stalkie_big_nohaplotig	CDS	107813856	107814798	.	+	2	Parent=FBgn0039182.1.mrna1;Target=FBgn0039182.1 1421 2363 +
Chr2	stalkie_big_nohaplotig	CDS	107814870	107816638	.	+	1	Parent=FBgn0039182.1.mrna1;Target=FBgn0039182.1 2364 4132 +
Chr2	stalkie_big_nohaplotig	CDS	107816700	107816865	.	+	2	Parent=FBgn0039182.1.mrna1;Target=FBgn0039182.1 4133 4298 +
Chr2	stalkie_big_nohaplotig	CDS	107817686	107817845	.	+	1	Parent=FBgn0039182.1.mrna1;Target=FBgn0039182.1 4299 4458 +
Chr2	gffcl	locus	107868789	107869643	.	-	.	ID=RLOC_00020327;geneIDs=comp137224_c0_seq1.path1;transcripts=comp137224_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107868789	107869643	.	-	.	ID=comp137224_c0_seq1.mrna1;geneID=comp137224_c0_seq1.path1;Name=comp137224_c0_seq1;Dir=indeterminatecoverage=80.9;identity=99.9;matches=854;mismatches=1;indels=0;unknowns=0;Target=comp137224_c0_seq1 855 1 .;CDS_Target=comp137224_c0_seq1 538 407 .;locus=RLOC_00020327
Chr2	stalkie_big_nohaplotig	exon	107868789	107869643	99	-	.	Parent=comp137224_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	107869106	107869237	.	-	0	Parent=comp137224_c0_seq1.mrna1
Chr2	gffcl	locus	107993447	107994337	.	+	.	ID=RLOC_00020328;geneIDs=Dv_FBgn0206941.6.path1;transcripts=Dv_FBgn0206941.6.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	107993447	107994337	.	+	.	ID=Dv_FBgn0206941.6.mrna1;geneID=Dv_FBgn0206941.6.path1;Name=Dv_FBgn0206941.6;Dir=indeterminatecoverage=100.0;identity=98.8;matches=880;mismatches=8;indels=3;unknowns=0;Target=Dv_FBgn0206941.6 888 1 .;locus=RLOC_00020328
Chr2	stalkie_big_nohaplotig	exon	107993447	107994337	98	+	.	Parent=Dv_FBgn0206941.6.mrna1
Chr2	stalkie_big_nohaplotig	CDS	107993447	107994337	.	+	0	Parent=Dv_FBgn0206941.6.mrna1
Chr2	gffcl	locus	108121958	108124144	.	+	.	ID=RLOC_00020330;geneIDs=FBgn0037447.1.path1;transcripts=FBgn0037447.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108121958	108124144	.	+	.	ID=FBgn0037447.1.mrna1;geneID=FBgn0037447.1.path1;Name=FBgn0037447.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=2183;mismatches=4;indels=0;unknowns=0;Target=FBgn0037447.1 2187 1 .;locus=RLOC_00020330
Chr2	stalkie_big_nohaplotig	exon	108121958	108124144	99	+	.	Parent=FBgn0037447.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	108121958	108124144	.	+	0	Parent=FBgn0037447.1.mrna1
Chr2	gffcl	locus	108156867	108161362	.	-	.	ID=RLOC_00020331;geneIDs=comp75326_c0_seq1.path1;transcripts=comp75326_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108156867	108161362	.	-	.	ID=comp75326_c0_seq1.mrna1;geneID=comp75326_c0_seq1.path1;Name=comp75326_c0_seq1;Dir=sensecoverage=99.9;identity=99.0;matches=1137;mismatches=10;indels=1;unknowns=0;locus=RLOC_00020331
Chr2	stalkie_big_nohaplotig	exon	108156867	108157990	99	-	.	Parent=comp75326_c0_seq1.mrna1;Target=comp75326_c0_seq1 25 1147 +
Chr2	stalkie_big_nohaplotig	exon	108161339	108161362	100	-	.	Parent=comp75326_c0_seq1.mrna1;Target=comp75326_c0_seq1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	108157849	108157990	.	-	1	Parent=comp75326_c0_seq1.mrna1;Target=comp75326_c0_seq1 25 166 +
Chr2	stalkie_big_nohaplotig	CDS	108161339	108161361	.	-	0	Parent=comp75326_c0_seq1.mrna1;Target=comp75326_c0_seq1 2 24 +
Chr2	gffcl	locus	108219677	108220360	.	-	.	ID=RLOC_00020332;geneIDs=FBgn0051361.1.path2;transcripts=FBgn0051361.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	108219677	108220360	.	-	.	ID=FBgn0051361.1.mrna2;geneID=FBgn0051361.1.path2;Name=FBgn0051361.1;Dir=sensecoverage=29.3;identity=100.0;matches=419;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020332
Chr2	stalkie_big_nohaplotig	exon	108219677	108219777	100	-	.	Parent=FBgn0051361.1.mrna2;Target=FBgn0051361.1 1328 1428 +
Chr2	stalkie_big_nohaplotig	exon	108219856	108219961	100	-	.	Parent=FBgn0051361.1.mrna2;Target=FBgn0051361.1 1222 1327 +
Chr2	stalkie_big_nohaplotig	exon	108220149	108220360	100	-	.	Parent=FBgn0051361.1.mrna2;Target=FBgn0051361.1 1010 1221 +
Chr2	stalkie_big_nohaplotig	CDS	108219677	108219777	.	-	1	Parent=FBgn0051361.1.mrna2;Target=FBgn0051361.1 1328 1428 +
Chr2	stalkie_big_nohaplotig	CDS	108219856	108219961	.	-	2	Parent=FBgn0051361.1.mrna2;Target=FBgn0051361.1 1222 1327 +
Chr2	stalkie_big_nohaplotig	CDS	108220149	108220360	.	-	1	Parent=FBgn0051361.1.mrna2;Target=FBgn0051361.1 1010 1221 +
Chr2	gffcl	locus	108232304	108302812	.	+	.	ID=RLOC_00020333;geneIDs=FBgn0051361.1.path1;transcripts=FBgn0051361.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108232304	108302812	.	+	.	ID=FBgn0051361.1.mrna1;geneID=FBgn0051361.1.path1;Name=FBgn0051361.1;Dir=sensecoverage=70.7;identity=99.9;matches=1008;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020333
Chr2	stalkie_big_nohaplotig	exon	108232304	108232406	100	+	.	Parent=FBgn0051361.1.mrna1;Target=FBgn0051361.1 1 103 +
Chr2	stalkie_big_nohaplotig	exon	108292528	108293195	99	+	.	Parent=FBgn0051361.1.mrna1;Target=FBgn0051361.1 104 771 +
Chr2	stalkie_big_nohaplotig	exon	108302575	108302812	100	+	.	Parent=FBgn0051361.1.mrna1;Target=FBgn0051361.1 772 1009 +
Chr2	stalkie_big_nohaplotig	CDS	108232304	108232406	.	+	0	Parent=FBgn0051361.1.mrna1;Target=FBgn0051361.1 1 103 +
Chr2	stalkie_big_nohaplotig	CDS	108292528	108293195	.	+	2	Parent=FBgn0051361.1.mrna1;Target=FBgn0051361.1 104 771 +
Chr2	stalkie_big_nohaplotig	CDS	108302575	108302812	.	+	0	Parent=FBgn0051361.1.mrna1;Target=FBgn0051361.1 772 1009 +
Chr2	gffcl	locus	108233031	108234996	.	+	.	ID=RLOC_00020334;geneIDs=comp140009_c2_seq1.path1;transcripts=comp140009_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108233031	108234996	.	+	.	ID=comp140009_c2_seq1.mrna1;geneID=comp140009_c2_seq1.path1;Name=comp140009_c2_seq1;Dir=antisensecoverage=97.2;identity=95.3;matches=625;mismatches=28;indels=3;unknowns=0;Target=comp140009_c2_seq1 215 271 .;locus=RLOC_00020334
Chr2	stalkie_big_nohaplotig	exon	108233031	108233134	88	+	.	Parent=comp140009_c2_seq1.mrna1;Target=comp140009_c2_seq1 572 672 -
Chr2	stalkie_big_nohaplotig	exon	108234445	108234996	96	+	.	Parent=comp140009_c2_seq1.mrna1;Target=comp140009_c2_seq1 20 571 -
Chr2	stalkie_big_nohaplotig	CDS	108234745	108234801	.	+	0	Parent=comp140009_c2_seq1.mrna1
Chr2	gffcl	locus	108275689	108278790	.	-	.	ID=RLOC_00020335;geneIDs=comp161525_c1_seq1.path1;transcripts=comp161525_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108275689	108278790	.	-	.	ID=comp161525_c1_seq1.mrna1;geneID=comp161525_c1_seq1.path1;Name=comp161525_c1_seq1;Dir=sensecoverage=100.0;identity=98.9;matches=1477;mismatches=14;indels=2;unknowns=0;Target=comp161525_c1_seq1 240 557 +;locus=RLOC_00020335
Chr2	stalkie_big_nohaplotig	exon	108275689	108275995	98	-	.	Parent=comp161525_c1_seq1.mrna1;Target=comp161525_c1_seq1 1186 1493 +
Chr2	stalkie_big_nohaplotig	exon	108276060	108276157	95	-	.	Parent=comp161525_c1_seq1.mrna1;Target=comp161525_c1_seq1 1088 1185 +
Chr2	stalkie_big_nohaplotig	exon	108276250	108276298	92	-	.	Parent=comp161525_c1_seq1.mrna1;Target=comp161525_c1_seq1 1038 1087 +
Chr2	stalkie_big_nohaplotig	exon	108276631	108276692	100	-	.	Parent=comp161525_c1_seq1.mrna1;Target=comp161525_c1_seq1 976 1037 +
Chr2	stalkie_big_nohaplotig	exon	108276789	108276893	100	-	.	Parent=comp161525_c1_seq1.mrna1;Target=comp161525_c1_seq1 871 975 +
Chr2	stalkie_big_nohaplotig	exon	108276956	108277048	100	-	.	Parent=comp161525_c1_seq1.mrna1;Target=comp161525_c1_seq1 778 870 +
Chr2	stalkie_big_nohaplotig	exon	108277118	108277207	100	-	.	Parent=comp161525_c1_seq1.mrna1;Target=comp161525_c1_seq1 688 777 +
Chr2	stalkie_big_nohaplotig	exon	108277470	108277573	99	-	.	Parent=comp161525_c1_seq1.mrna1;Target=comp161525_c1_seq1 584 687 +
Chr2	stalkie_big_nohaplotig	exon	108277645	108278070	99	-	.	Parent=comp161525_c1_seq1.mrna1;Target=comp161525_c1_seq1 158 583 +
Chr2	stalkie_big_nohaplotig	exon	108278634	108278790	100	-	.	Parent=comp161525_c1_seq1.mrna1;Target=comp161525_c1_seq1 1 157 +
Chr2	stalkie_big_nohaplotig	CDS	108277671	108277988	.	-	0	Parent=comp161525_c1_seq1.mrna1
Chr2	gffcl	locus	108324923	108326189	.	-	.	ID=RLOC_00020336;geneIDs=comp154296_c0_seq1.path1;transcripts=comp154296_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108324923	108326189	.	-	.	ID=comp154296_c0_seq1.mrna1;geneID=comp154296_c0_seq1.path1;Name=comp154296_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.1;matches=1256;mismatches=11;indels=0;unknowns=0;Target=comp154296_c0_seq1 1271 5 .;CDS_Target=comp154296_c0_seq1 756 478 .;locus=RLOC_00020336
Chr2	stalkie_big_nohaplotig	exon	108324923	108326189	99	-	.	Parent=comp154296_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	108325438	108325716	.	-	0	Parent=comp154296_c0_seq1.mrna1
Chr2	gffcl	locus	108355303	108359376	.	+	.	ID=RLOC_00020337;geneIDs=comp149703_c0_seq1.path1;transcripts=comp149703_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108355303	108359376	.	+	.	ID=comp149703_c0_seq1.mrna1;geneID=comp149703_c0_seq1.path1;Name=comp149703_c0_seq1;Dir=antisensecoverage=97.9;identity=95.9;matches=917;mismatches=16;indels=23;unknowns=0;locus=RLOC_00020337
Chr2	stalkie_big_nohaplotig	exon	108355303	108355913	94	+	.	Parent=comp149703_c0_seq1.mrna1;Target=comp149703_c0_seq1 338 969 -
Chr2	stalkie_big_nohaplotig	exon	108359054	108359376	99	+	.	Parent=comp149703_c0_seq1.mrna1;Target=comp149703_c0_seq1 15 337 -
Chr2	stalkie_big_nohaplotig	CDS	108355782	108355913	.	+	0	Parent=comp149703_c0_seq1.mrna1;Target=comp149703_c0_seq1 338 470 .
Chr2	stalkie_big_nohaplotig	CDS	108359054	108359073	.	+	0	Parent=comp149703_c0_seq1.mrna1;Target=comp149703_c0_seq1 318 337 .
Chr2	gffcl	locus	108377245	108378879	.	+	.	ID=RLOC_00020338;geneIDs=comp160806_c0_seq1.path1;transcripts=comp160806_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108377245	108378879	.	+	.	ID=comp160806_c0_seq1.mrna1;geneID=comp160806_c0_seq1.path1;Name=comp160806_c0_seq1;Dir=antisensecoverage=100.0;identity=98.1;matches=716;mismatches=12;indels=2;unknowns=0;locus=RLOC_00020338
Chr2	stalkie_big_nohaplotig	exon	108377245	108377310	95	+	.	Parent=comp160806_c0_seq1.mrna1;Target=comp160806_c0_seq1 665 730 -
Chr2	stalkie_big_nohaplotig	exon	108377365	108377406	95	+	.	Parent=comp160806_c0_seq1.mrna1;Target=comp160806_c0_seq1 623 664 -
Chr2	stalkie_big_nohaplotig	exon	108377904	108378035	100	+	.	Parent=comp160806_c0_seq1.mrna1;Target=comp160806_c0_seq1 491 622 -
Chr2	stalkie_big_nohaplotig	exon	108378094	108378278	99	+	.	Parent=comp160806_c0_seq1.mrna1;Target=comp160806_c0_seq1 306 490 -
Chr2	stalkie_big_nohaplotig	exon	108378577	108378879	97	+	.	Parent=comp160806_c0_seq1.mrna1;Target=comp160806_c0_seq1 1 305 -
Chr2	stalkie_big_nohaplotig	CDS	108377246	108377310	.	+	0	Parent=comp160806_c0_seq1.mrna1;Target=comp160806_c0_seq1 665 729 .
Chr2	stalkie_big_nohaplotig	CDS	108377365	108377406	.	+	1	Parent=comp160806_c0_seq1.mrna1;Target=comp160806_c0_seq1 623 664 .
Chr2	stalkie_big_nohaplotig	CDS	108377904	108378035	.	+	1	Parent=comp160806_c0_seq1.mrna1;Target=comp160806_c0_seq1 491 622 .
Chr2	stalkie_big_nohaplotig	CDS	108378094	108378278	.	+	1	Parent=comp160806_c0_seq1.mrna1;Target=comp160806_c0_seq1 306 490 .
Chr2	stalkie_big_nohaplotig	CDS	108378577	108378692	.	+	2	Parent=comp160806_c0_seq1.mrna1;Target=comp160806_c0_seq1 190 305 .
Chr2	gffcl	locus	108399434	108401304	.	-	.	ID=RLOC_00020339;geneIDs=comp162929_c0_seq1.path1;transcripts=comp162929_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108399434	108401304	.	-	.	ID=comp162929_c0_seq1.mrna1;geneID=comp162929_c0_seq1.path1;Name=comp162929_c0_seq1;Dir=sensecoverage=99.7;identity=93.0;matches=648;mismatches=14;indels=35;unknowns=0;Target=comp162929_c0_seq1 240 371 +;locus=RLOC_00020339
Chr2	stalkie_big_nohaplotig	exon	108399434	108399972	99	-	.	Parent=comp162929_c0_seq1.mrna1;Target=comp162929_c0_seq1 128 667 +
Chr2	stalkie_big_nohaplotig	exon	108401151	108401304	70	-	.	Parent=comp162929_c0_seq1.mrna1;Target=comp162929_c0_seq1 2 127 +
Chr2	stalkie_big_nohaplotig	CDS	108399730	108399861	.	-	0	Parent=comp162929_c0_seq1.mrna1
Chr2	gffcl	locus	108402163	108402980	.	-	.	ID=RLOC_00020340;geneIDs=FBgn0010421.4.path1;transcripts=FBgn0010421.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108402163	108402980	.	-	.	ID=FBgn0010421.4.mrna1;geneID=FBgn0010421.4.path1;Name=FBgn0010421.4;Dir=sensecoverage=100.0;identity=98.5;matches=742;mismatches=11;indels=0;unknowns=0;locus=RLOC_00020340
Chr2	stalkie_big_nohaplotig	exon	108402163	108402432	99	-	.	Parent=FBgn0010421.4.mrna1;Target=FBgn0010421.4 484 753 +
Chr2	stalkie_big_nohaplotig	exon	108402498	108402980	97	-	.	Parent=FBgn0010421.4.mrna1;Target=FBgn0010421.4 1 483 +
Chr2	stalkie_big_nohaplotig	CDS	108402163	108402432	.	-	0	Parent=FBgn0010421.4.mrna1;Target=FBgn0010421.4 484 753 +
Chr2	stalkie_big_nohaplotig	CDS	108402498	108402980	.	-	0	Parent=FBgn0010421.4.mrna1;Target=FBgn0010421.4 1 483 +
Chr2	gffcl	locus	108413245	110253998	.	-	.	ID=RLOC_00020341;geneIDs=comp157276_c2_seq1.path1;transcripts=comp157276_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108413245	110253998	.	-	.	ID=comp157276_c2_seq1.mrna1;geneID=comp157276_c2_seq1.path1;Name=comp157276_c2_seq1;Dir=indeterminatecoverage=96.5;identity=99.4;matches=1494;mismatches=9;indels=0;unknowns=0;locus=RLOC_00020341
Chr2	stalkie_big_nohaplotig	exon	108413245	108413249	100	-	.	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1562 1558 .
Chr2	stalkie_big_nohaplotig	exon	108416702	108416704	100	-	.	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1557 1555 .
Chr2	stalkie_big_nohaplotig	exon	108416739	108416743	100	-	.	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1495 1491 .
Chr2	stalkie_big_nohaplotig	exon	108417026	108417034	100	-	.	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1490 1482 .
Chr2	stalkie_big_nohaplotig	exon	108421934	108421941	100	-	.	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1481 1474 .
Chr2	stalkie_big_nohaplotig	exon	108423997	108424001	100	-	.	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1473 1469 .
Chr2	stalkie_big_nohaplotig	exon	108438888	108438897	90	-	.	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1468 1459 .
Chr2	stalkie_big_nohaplotig	exon	108443932	108443943	75	-	.	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1458 1447 .
Chr2	stalkie_big_nohaplotig	exon	108447512	108447515	100	-	.	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1446 1443 .
Chr2	stalkie_big_nohaplotig	exon	108449022	108449026	100	-	.	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1442 1438 .
Chr2	stalkie_big_nohaplotig	exon	108449371	108449381	81	-	.	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1437 1427 .
Chr2	stalkie_big_nohaplotig	exon	108453207	108453215	100	-	.	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1426 1418 .
Chr2	stalkie_big_nohaplotig	exon	108461069	108461070	100	-	.	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1417 1416 .
Chr2	stalkie_big_nohaplotig	exon	108465082	108465084	100	-	.	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1415 1413 .
Chr2	stalkie_big_nohaplotig	exon	108470133	108470141	100	-	.	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1412 1404 .
Chr2	stalkie_big_nohaplotig	exon	108475238	108475250	100	-	.	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1403 1391 .
Chr2	stalkie_big_nohaplotig	exon	108491727	108491728	100	-	.	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1390 1389 .
Chr2	stalkie_big_nohaplotig	exon	110252611	110253998	99	-	.	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1388 1 .
Chr2	stalkie_big_nohaplotig	CDS	108416739	108416743	.	-	0	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1495 1491 .
Chr2	stalkie_big_nohaplotig	CDS	108417026	108417034	.	-	0	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1490 1482 .
Chr2	stalkie_big_nohaplotig	CDS	108421934	108421941	.	-	2	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1481 1474 .
Chr2	stalkie_big_nohaplotig	CDS	108423997	108424001	.	-	1	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1473 1469 .
Chr2	stalkie_big_nohaplotig	CDS	108438888	108438897	.	-	2	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1468 1459 .
Chr2	stalkie_big_nohaplotig	CDS	108443932	108443943	.	-	2	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1458 1447 .
Chr2	stalkie_big_nohaplotig	CDS	108447512	108447515	.	-	0	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1446 1443 .
Chr2	stalkie_big_nohaplotig	CDS	108449022	108449026	.	-	2	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1442 1438 .
Chr2	stalkie_big_nohaplotig	CDS	108449371	108449381	.	-	1	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1437 1427 .
Chr2	stalkie_big_nohaplotig	CDS	108453207	108453215	.	-	1	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1426 1418 .
Chr2	stalkie_big_nohaplotig	CDS	108461069	108461070	.	-	0	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1417 1416 .
Chr2	stalkie_big_nohaplotig	CDS	108465082	108465084	.	-	0	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1415 1413 .
Chr2	stalkie_big_nohaplotig	CDS	108470133	108470141	.	-	0	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1412 1404 .
Chr2	stalkie_big_nohaplotig	CDS	108475238	108475250	.	-	1	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1403 1391 .
Chr2	stalkie_big_nohaplotig	CDS	108491727	108491728	.	-	0	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1390 1389 .
Chr2	stalkie_big_nohaplotig	CDS	110252611	110252637	.	-	0	Parent=comp157276_c2_seq1.mrna1;Target=comp157276_c2_seq1 1388 1362 .
Chr2	gffcl	locus	108423230	108424965	.	+	.	ID=RLOC_00020342;geneIDs=comp143155_c0_seq1.path2;transcripts=comp143155_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	108423230	108424965	.	+	.	ID=comp143155_c0_seq1.mrna2;geneID=comp143155_c0_seq1.path2;Name=comp143155_c0_seq1;Dir=sensecoverage=99.7;identity=96.1;matches=697;mismatches=22;indels=6;unknowns=0;Target=comp143155_c0_seq1 232 297 +;locus=RLOC_00020342
Chr2	stalkie_big_nohaplotig	exon	108423230	108423263	80	+	.	Parent=comp143155_c0_seq1.mrna2;Target=comp143155_c0_seq1 2 32 +
Chr2	stalkie_big_nohaplotig	exon	108424202	108424392	99	+	.	Parent=comp143155_c0_seq1.mrna2;Target=comp143155_c0_seq1 33 223 +
Chr2	stalkie_big_nohaplotig	exon	108424468	108424965	95	+	.	Parent=comp143155_c0_seq1.mrna2;Target=comp143155_c0_seq1 224 722 +
Chr2	stalkie_big_nohaplotig	CDS	108424476	108424540	.	+	0	Parent=comp143155_c0_seq1.mrna2
Chr2	gffcl	locus	108429239	108429687	.	-	.	ID=RLOC_00020343;geneIDs=Dv_FBgn0209645.2.path7;transcripts=Dv_FBgn0209645.2.mrna7
Chr2	stalkie_big_nohaplotig	mRNA	108429239	108429687	.	-	.	ID=Dv_FBgn0209645.2.mrna7;geneID=Dv_FBgn0209645.2.path7;Name=Dv_FBgn0209645.2;Dir=indeterminatecoverage=100.0;identity=97.1;matches=437;mismatches=12;indels=1;unknowns=0;Target=Dv_FBgn0209645.2 450 1 .;CDS_Target=Dv_FBgn0209645.2 47 3 .;locus=RLOC_00020343
Chr2	stalkie_big_nohaplotig	exon	108429239	108429687	97	-	.	Parent=Dv_FBgn0209645.2.mrna7
Chr2	stalkie_big_nohaplotig	CDS	108429642	108429685	.	-	0	Parent=Dv_FBgn0209645.2.mrna7
Chr2	gffcl	locus	108444871	108446065	.	+	.	ID=RLOC_00020344;geneIDs=comp155682_c0_seq1.path1;transcripts=comp155682_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108444871	108446065	.	+	.	ID=comp155682_c0_seq1.mrna1;geneID=comp155682_c0_seq1.path1;Name=comp155682_c0_seq1;Dir=sensecoverage=98.3;identity=99.6;matches=1142;mismatches=2;indels=3;unknowns=0;Target=comp155682_c0_seq1 608 997 +;locus=RLOC_00020344
Chr2	stalkie_big_nohaplotig	exon	108444871	108445477	100	+	.	Parent=comp155682_c0_seq1.mrna1;Target=comp155682_c0_seq1 1 607 +
Chr2	stalkie_big_nohaplotig	exon	108445529	108446065	99	+	.	Parent=comp155682_c0_seq1.mrna1;Target=comp155682_c0_seq1 608 1147 +
Chr2	stalkie_big_nohaplotig	CDS	108445529	108445918	.	+	0	Parent=comp155682_c0_seq1.mrna1
Chr2	gffcl	locus	108460209	108502665	.	+	.	ID=RLOC_00020345;geneIDs=comp143004_c1_seq1.path1,comp143004_c1_seq1.path2;transcripts=comp143004_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108460209	108502665	.	+	.	ID=comp143004_c1_seq1.mrna1;geneID=comp143004_c1_seq1.path1;Name=comp143004_c1_seq1;Dir=indeterminatecoverage=72.7;identity=94.0;matches=391;mismatches=15;indels=10;unknowns=0;Target=comp143004_c1_seq1 272 3 .;locus=RLOC_00020345
Chr2	stalkie_big_nohaplotig	exon	108460209	108460580	97	+	.	Parent=comp143004_c1_seq1.mrna1;Target=comp143004_c1_seq1 372 1 .
Chr2	stalkie_big_nohaplotig	exon	108473606	108473632	62	+	.	Parent=comp143004_c1_seq1.mrna1;Target=comp143004_c1_seq1 427 399 .
Chr2	stalkie_big_nohaplotig	exon	108502655	108502665	81	+	.	Parent=comp143004_c1_seq1.mrna1;Target=comp143004_c1_seq1 439 429 .
Chr2	stalkie_big_nohaplotig	CDS	108460211	108460481	.	+	0	Parent=comp143004_c1_seq1.mrna1
Chr2	gffcl	locus	108476424	108479026	.	+	.	ID=RLOC_00020346;geneIDs=FBgn0032287.1.path1;transcripts=FBgn0032287.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108476424	108479026	.	+	.	ID=FBgn0032287.1.mrna1;geneID=FBgn0032287.1.path1;Name=FBgn0032287.1;Dir=sensecoverage=100.0;identity=100.0;matches=1299;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020346
Chr2	stalkie_big_nohaplotig	exon	108476424	108476742	100	+	.	Parent=FBgn0032287.1.mrna1;Target=FBgn0032287.1 1 319 +
Chr2	stalkie_big_nohaplotig	exon	108476921	108477132	100	+	.	Parent=FBgn0032287.1.mrna1;Target=FBgn0032287.1 320 531 +
Chr2	stalkie_big_nohaplotig	exon	108478199	108478619	100	+	.	Parent=FBgn0032287.1.mrna1;Target=FBgn0032287.1 532 952 +
Chr2	stalkie_big_nohaplotig	exon	108478680	108479026	100	+	.	Parent=FBgn0032287.1.mrna1;Target=FBgn0032287.1 953 1299 +
Chr2	stalkie_big_nohaplotig	CDS	108476424	108476742	.	+	0	Parent=FBgn0032287.1.mrna1;Target=FBgn0032287.1 1 319 +
Chr2	stalkie_big_nohaplotig	CDS	108476921	108477132	.	+	2	Parent=FBgn0032287.1.mrna1;Target=FBgn0032287.1 320 531 +
Chr2	stalkie_big_nohaplotig	CDS	108478199	108478619	.	+	0	Parent=FBgn0032287.1.mrna1;Target=FBgn0032287.1 532 952 +
Chr2	stalkie_big_nohaplotig	CDS	108478680	108479026	.	+	2	Parent=FBgn0032287.1.mrna1;Target=FBgn0032287.1 953 1299 +
Chr2	gffcl	locus	108479331	108480096	.	-	.	ID=RLOC_00020347;geneIDs=comp143155_c0_seq1.path1;transcripts=comp143155_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108479331	108480096	.	-	.	ID=comp143155_c0_seq1.mrna1;geneID=comp143155_c0_seq1.path1;Name=comp143155_c0_seq1;Dir=sensecoverage=95.7;identity=97.3;matches=673;mismatches=18;indels=1;unknowns=0;Target=comp143155_c0_seq1 232 297 +;locus=RLOC_00020347
Chr2	stalkie_big_nohaplotig	exon	108479331	108479828	96	-	.	Parent=comp143155_c0_seq1.mrna1;Target=comp143155_c0_seq1 224 722 +
Chr2	stalkie_big_nohaplotig	exon	108479904	108480096	99	-	.	Parent=comp143155_c0_seq1.mrna1;Target=comp143155_c0_seq1 31 223 +
Chr2	stalkie_big_nohaplotig	CDS	108479756	108479820	.	-	0	Parent=comp143155_c0_seq1.mrna1
Chr2	gffcl	locus	108487738	108488075	.	-	.	ID=RLOC_00020348;geneIDs=comp147566_c0_seq1.path1;transcripts=comp147566_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108487738	108488075	.	-	.	ID=comp147566_c0_seq1.mrna1;geneID=comp147566_c0_seq1.path1;Name=comp147566_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.7;matches=337;mismatches=1;indels=0;unknowns=0;Target=comp147566_c0_seq1 338 1 .;CDS_Target=comp147566_c0_seq1 253 2 .;locus=RLOC_00020348
Chr2	stalkie_big_nohaplotig	exon	108487738	108488075	99	-	.	Parent=comp147566_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	108487823	108488074	.	-	0	Parent=comp147566_c0_seq1.mrna1
Chr2	gffcl	locus	108490088	108868017	.	.	.	ID=RLOC_00020349;geneIDs=FBgn0037993.1.path1,comp116673_c0_seq1.path1,comp160334_c0_seq1.path1,comp161777_c0_seq1.path1,comp162501_c1_seq1.path1,comp152975_c0_seq1.path10;transcripts=comp160334_c0_seq1.mrna1,comp161777_c0_seq1.mrna1,comp162501_c1_seq1.mrna1,comp116673_c0_seq1.mrna1,FBgn0037993.1.mrna1,comp152975_c0_seq1.mrna10
Chr2	stalkie_big_nohaplotig	mRNA	108490088	108868017	.	-	.	ID=comp160334_c0_seq1.mrna1;geneID=comp160334_c0_seq1.path1;Name=comp160334_c0_seq1;Dir=indeterminatecoverage=98.9;identity=95.5;matches=1071;mismatches=16;indels=34;unknowns=99;Target=comp160334_c0_seq1 1700 1614 .;locus=RLOC_00020349
Chr2	stalkie_big_nohaplotig	exon	108490088	108490562	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1899 1425 .
Chr2	stalkie_big_nohaplotig	exon	108491454	108491459	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1424 1419 .
Chr2	stalkie_big_nohaplotig	exon	108493847	108493850	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1418 1415 .
Chr2	stalkie_big_nohaplotig	exon	108501064	108501066	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1414 1412 .
Chr2	stalkie_big_nohaplotig	exon	108501979	108501980	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1411 1410 .
Chr2	stalkie_big_nohaplotig	exon	108503358	108503361	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1409 1406 .
Chr2	stalkie_big_nohaplotig	exon	108506503	108506506	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1405 1402 .
Chr2	stalkie_big_nohaplotig	exon	108506516	108506531	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1397 1382 .
Chr2	stalkie_big_nohaplotig	exon	108510268	108510276	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1349 1341 .
Chr2	stalkie_big_nohaplotig	exon	108516703	108516710	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1272 1265 .
Chr2	stalkie_big_nohaplotig	exon	108523911	108523922	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1228 1217 .
Chr2	stalkie_big_nohaplotig	exon	108531852	108531853	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1216 1215 .
Chr2	stalkie_big_nohaplotig	exon	108534171	108534174	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1214 1211 .
Chr2	stalkie_big_nohaplotig	exon	108542065	108542072	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1210 1203 .
Chr2	stalkie_big_nohaplotig	exon	108549554	108549558	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1202 1198 .
Chr2	stalkie_big_nohaplotig	exon	108557439	108557447	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1197 1189 .
Chr2	stalkie_big_nohaplotig	exon	108560655	108560658	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1188 1185 .
Chr2	stalkie_big_nohaplotig	exon	108560919	108560920	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1184 1183 .
Chr2	stalkie_big_nohaplotig	exon	108560958	108560959	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1148 1147 .
Chr2	stalkie_big_nohaplotig	exon	108563940	108563949	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1140 1131 .
Chr2	stalkie_big_nohaplotig	exon	108566358	108566364	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1130 1124 .
Chr2	stalkie_big_nohaplotig	exon	108566663	108566670	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1123 1116 .
Chr2	stalkie_big_nohaplotig	exon	108590900	108590905	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1115 1110 .
Chr2	stalkie_big_nohaplotig	exon	108590964	108590972	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1053 1045 .
Chr2	stalkie_big_nohaplotig	exon	108593748	108593756	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1044 1036 .
Chr2	stalkie_big_nohaplotig	exon	108597987	108597988	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1035 1034 .
Chr2	stalkie_big_nohaplotig	exon	108598414	108598425	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1026 1015 .
Chr2	stalkie_big_nohaplotig	exon	108606334	108606346	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1013 1001 .
Chr2	stalkie_big_nohaplotig	exon	108611795	108611797	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 1000 998 .
Chr2	stalkie_big_nohaplotig	exon	108614434	108614438	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 997 993 .
Chr2	stalkie_big_nohaplotig	exon	108615992	108615993	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 992 991 .
Chr2	stalkie_big_nohaplotig	exon	108616036	108616043	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 956 949 .
Chr2	stalkie_big_nohaplotig	exon	108620061	108620068	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 948 941 .
Chr2	stalkie_big_nohaplotig	exon	108620082	108620089	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 903 896 .
Chr2	stalkie_big_nohaplotig	exon	108620264	108620266	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 895 893 .
Chr2	stalkie_big_nohaplotig	exon	108620270	108620277	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 860 853 .
Chr2	stalkie_big_nohaplotig	exon	108632129	108632131	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 852 850 .
Chr2	stalkie_big_nohaplotig	exon	108640084	108640085	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 849 848 .
Chr2	stalkie_big_nohaplotig	exon	108646770	108646777	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 847 840 .
Chr2	stalkie_big_nohaplotig	exon	108649995	108649999	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 839 835 .
Chr2	stalkie_big_nohaplotig	exon	108662612	108662617	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 834 829 .
Chr2	stalkie_big_nohaplotig	exon	108669168	108669171	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 828 825 .
Chr2	stalkie_big_nohaplotig	exon	108669304	108669313	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 807 798 .
Chr2	stalkie_big_nohaplotig	exon	108696074	108696085	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 780 769 .
Chr2	stalkie_big_nohaplotig	exon	108723768	108723777	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 663 654 .
Chr2	stalkie_big_nohaplotig	exon	108726484	108726489	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 653 648 .
Chr2	stalkie_big_nohaplotig	exon	108731608	108731617	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 630 621 .
Chr2	stalkie_big_nohaplotig	exon	108734257	108734265	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 520 512 .
Chr2	stalkie_big_nohaplotig	exon	108734316	108734327	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 464 453 .
Chr2	stalkie_big_nohaplotig	exon	108753125	108753128	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 451 448 .
Chr2	stalkie_big_nohaplotig	exon	108756818	108756819	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 447 446 .
Chr2	stalkie_big_nohaplotig	exon	108760391	108760393	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 445 443 .
Chr2	stalkie_big_nohaplotig	exon	108762468	108762478	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 437 427 .
Chr2	stalkie_big_nohaplotig	exon	108768616	108768617	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 426 425 .
Chr2	stalkie_big_nohaplotig	exon	108773913	108773914	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 424 423 .
Chr2	stalkie_big_nohaplotig	exon	108776749	108776757	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 422 414 .
Chr2	stalkie_big_nohaplotig	exon	108777700	108777707	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 410 403 .
Chr2	stalkie_big_nohaplotig	exon	108777802	108777807	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 402 397 .
Chr2	stalkie_big_nohaplotig	exon	108785244	108785253	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 395 386 .
Chr2	stalkie_big_nohaplotig	exon	108791341	108791344	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 385 382 .
Chr2	stalkie_big_nohaplotig	exon	108796407	108796413	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 381 375 .
Chr2	stalkie_big_nohaplotig	exon	108799545	108799547	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 374 372 .
Chr2	stalkie_big_nohaplotig	exon	108804384	108804389	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 371 366 .
Chr2	stalkie_big_nohaplotig	exon	108806250	108806257	100	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 365 358 .
Chr2	stalkie_big_nohaplotig	exon	108806276	108806321	38	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 346 267 .
Chr2	stalkie_big_nohaplotig	exon	108867767	108868017	99	-	.	Parent=comp160334_c0_seq1.mrna1;Target=comp160334_c0_seq1 266 16 .
Chr2	stalkie_big_nohaplotig	CDS	108490287	108490373	.	-	0	Parent=comp160334_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108523829	108560618	.	-	.	ID=comp161777_c0_seq1.mrna1;geneID=comp161777_c0_seq1.path1;Name=comp161777_c0_seq1;Dir=antisensecoverage=96.5;identity=97.9;matches=1209;mismatches=23;indels=3;unknowns=0;locus=RLOC_00020349
Chr2	stalkie_big_nohaplotig	exon	108523829	108524120	98	-	.	Parent=comp161777_c0_seq1.mrna1;Target=comp161777_c0_seq1 18 311 -
Chr2	stalkie_big_nohaplotig	exon	108524192	108524254	100	-	.	Parent=comp161777_c0_seq1.mrna1;Target=comp161777_c0_seq1 312 374 -
Chr2	stalkie_big_nohaplotig	exon	108524348	108524438	94	-	.	Parent=comp161777_c0_seq1.mrna1;Target=comp161777_c0_seq1 375 465 -
Chr2	stalkie_big_nohaplotig	exon	108524507	108524576	97	-	.	Parent=comp161777_c0_seq1.mrna1;Target=comp161777_c0_seq1 466 535 -
Chr2	stalkie_big_nohaplotig	exon	108524635	108524707	98	-	.	Parent=comp161777_c0_seq1.mrna1;Target=comp161777_c0_seq1 536 608 -
Chr2	stalkie_big_nohaplotig	exon	108524772	108524856	98	-	.	Parent=comp161777_c0_seq1.mrna1;Target=comp161777_c0_seq1 609 693 -
Chr2	stalkie_big_nohaplotig	exon	108524941	108525045	97	-	.	Parent=comp161777_c0_seq1.mrna1;Target=comp161777_c0_seq1 694 798 -
Chr2	stalkie_big_nohaplotig	exon	108525105	108525514	97	-	.	Parent=comp161777_c0_seq1.mrna1;Target=comp161777_c0_seq1 799 1209 -
Chr2	stalkie_big_nohaplotig	exon	108529442	108529453	100	-	.	Parent=comp161777_c0_seq1.mrna1;Target=comp161777_c0_seq1 1227 1238 -
Chr2	stalkie_big_nohaplotig	exon	108530663	108530670	100	-	.	Parent=comp161777_c0_seq1.mrna1;Target=comp161777_c0_seq1 1239 1246 -
Chr2	stalkie_big_nohaplotig	exon	108533845	108533848	100	-	.	Parent=comp161777_c0_seq1.mrna1;Target=comp161777_c0_seq1 1254 1257 -
Chr2	stalkie_big_nohaplotig	exon	108534275	108534281	100	-	.	Parent=comp161777_c0_seq1.mrna1;Target=comp161777_c0_seq1 1258 1264 -
Chr2	stalkie_big_nohaplotig	exon	108544837	108544838	100	-	.	Parent=comp161777_c0_seq1.mrna1;Target=comp161777_c0_seq1 1265 1266 -
Chr2	stalkie_big_nohaplotig	exon	108560610	108560618	100	-	.	Parent=comp161777_c0_seq1.mrna1;Target=comp161777_c0_seq1 1267 1275 -
Chr2	stalkie_big_nohaplotig	CDS	108525512	108525514	.	-	0	Parent=comp161777_c0_seq1.mrna1;Target=comp161777_c0_seq1 1207 1209 .
Chr2	stalkie_big_nohaplotig	CDS	108529442	108529453	.	-	0	Parent=comp161777_c0_seq1.mrna1;Target=comp161777_c0_seq1 1227 1238 .
Chr2	stalkie_big_nohaplotig	CDS	108530663	108530670	.	-	2	Parent=comp161777_c0_seq1.mrna1;Target=comp161777_c0_seq1 1239 1246 .
Chr2	stalkie_big_nohaplotig	CDS	108533845	108533848	.	-	0	Parent=comp161777_c0_seq1.mrna1;Target=comp161777_c0_seq1 1254 1257 .
Chr2	stalkie_big_nohaplotig	CDS	108534275	108534281	.	-	1	Parent=comp161777_c0_seq1.mrna1;Target=comp161777_c0_seq1 1258 1264 .
Chr2	stalkie_big_nohaplotig	CDS	108544837	108544838	.	-	0	Parent=comp161777_c0_seq1.mrna1;Target=comp161777_c0_seq1 1265 1266 .
Chr2	stalkie_big_nohaplotig	CDS	108560610	108560618	.	-	0	Parent=comp161777_c0_seq1.mrna1;Target=comp161777_c0_seq1 1267 1275 .
Chr2	stalkie_big_nohaplotig	mRNA	108534134	108534898	.	-	.	ID=comp162501_c1_seq1.mrna1;geneID=comp162501_c1_seq1.path1;Name=comp162501_c1_seq1;Dir=sensecoverage=100.0;identity=98.9;matches=652;mismatches=7;indels=0;unknowns=0;locus=RLOC_00020349
Chr2	stalkie_big_nohaplotig	exon	108534134	108534312	100	-	.	Parent=comp162501_c1_seq1.mrna1;Target=comp162501_c1_seq1 481 659 +
Chr2	stalkie_big_nohaplotig	exon	108534419	108534898	98	-	.	Parent=comp162501_c1_seq1.mrna1;Target=comp162501_c1_seq1 1 480 +
Chr2	stalkie_big_nohaplotig	CDS	108534136	108534312	.	-	0	Parent=comp162501_c1_seq1.mrna1;Target=comp162501_c1_seq1 481 657 +
Chr2	stalkie_big_nohaplotig	CDS	108534419	108534463	.	-	0	Parent=comp162501_c1_seq1.mrna1;Target=comp162501_c1_seq1 436 480 +
Chr2	stalkie_big_nohaplotig	mRNA	108606159	108606640	.	+	.	ID=comp116673_c0_seq1.mrna1;geneID=comp116673_c0_seq1.path1;Name=comp116673_c0_seq1;Dir=indeterminatecoverage=99.4;identity=98.5;matches=475;mismatches=7;indels=0;unknowns=0;Target=comp116673_c0_seq1 484 3 .;CDS_Target=comp116673_c0_seq1 414 286 .;locus=RLOC_00020349
Chr2	stalkie_big_nohaplotig	exon	108606159	108606640	98	+	.	Parent=comp116673_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	108606442	108606570	.	+	0	Parent=comp116673_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108717766	108731711	.	-	.	ID=FBgn0037993.1.mrna1;geneID=FBgn0037993.1.path1;Name=FBgn0037993.1;Dir=sensecoverage=100.0;identity=100.0;matches=1455;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020349
Chr2	stalkie_big_nohaplotig	exon	108717766	108718205	100	-	.	Parent=FBgn0037993.1.mrna1;Target=FBgn0037993.1 1016 1455 +
Chr2	stalkie_big_nohaplotig	exon	108723511	108723616	100	-	.	Parent=FBgn0037993.1.mrna1;Target=FBgn0037993.1 910 1015 +
Chr2	stalkie_big_nohaplotig	exon	108726540	108727078	100	-	.	Parent=FBgn0037993.1.mrna1;Target=FBgn0037993.1 371 909 +
Chr2	stalkie_big_nohaplotig	exon	108728338	108728572	100	-	.	Parent=FBgn0037993.1.mrna1;Target=FBgn0037993.1 136 370 +
Chr2	stalkie_big_nohaplotig	exon	108731577	108731711	100	-	.	Parent=FBgn0037993.1.mrna1;Target=FBgn0037993.1 1 135 +
Chr2	stalkie_big_nohaplotig	CDS	108717766	108718205	.	-	2	Parent=FBgn0037993.1.mrna1;Target=FBgn0037993.1 1016 1455 +
Chr2	stalkie_big_nohaplotig	CDS	108723511	108723616	.	-	0	Parent=FBgn0037993.1.mrna1;Target=FBgn0037993.1 910 1015 +
Chr2	stalkie_big_nohaplotig	CDS	108726540	108727078	.	-	2	Parent=FBgn0037993.1.mrna1;Target=FBgn0037993.1 371 909 +
Chr2	stalkie_big_nohaplotig	CDS	108728338	108728572	.	-	0	Parent=FBgn0037993.1.mrna1;Target=FBgn0037993.1 136 370 +
Chr2	stalkie_big_nohaplotig	CDS	108731577	108731711	.	-	0	Parent=FBgn0037993.1.mrna1;Target=FBgn0037993.1 1 135 +
Chr2	stalkie_big_nohaplotig	mRNA	108752955	108753436	.	-	.	ID=comp152975_c0_seq1.mrna10;geneID=comp152975_c0_seq1.path10;Name=comp152975_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=477;mismatches=5;indels=0;unknowns=0;Target=comp152975_c0_seq1 482 1 .;CDS_Target=comp152975_c0_seq1 185 63 .;locus=RLOC_00020349
Chr2	stalkie_big_nohaplotig	exon	108752955	108753436	98	-	.	Parent=comp152975_c0_seq1.mrna10
Chr2	stalkie_big_nohaplotig	CDS	108753252	108753374	.	-	0	Parent=comp152975_c0_seq1.mrna10
Chr2	gffcl	locus	108494652	108496130	.	+	.	ID=RLOC_00020350;geneIDs=FBgn0039743.4.path1;transcripts=FBgn0039743.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108494652	108496130	.	+	.	ID=FBgn0039743.4.mrna1;geneID=FBgn0039743.4.path1;Name=FBgn0039743.4;Dir=sensecoverage=100.0;identity=99.2;matches=1208;mismatches=4;indels=6;unknowns=0;locus=RLOC_00020350
Chr2	stalkie_big_nohaplotig	exon	108494652	108495030	99	+	.	Parent=FBgn0039743.4.mrna1;Target=FBgn0039743.4 1 379 +
Chr2	stalkie_big_nohaplotig	exon	108495292	108496130	98	+	.	Parent=FBgn0039743.4.mrna1;Target=FBgn0039743.4 380 1212 +
Chr2	stalkie_big_nohaplotig	CDS	108494652	108495030	.	+	0	Parent=FBgn0039743.4.mrna1;Target=FBgn0039743.4 1 379 +
Chr2	stalkie_big_nohaplotig	CDS	108495292	108496130	.	+	2	Parent=FBgn0039743.4.mrna1;Target=FBgn0039743.4 380 1212 +
Chr2	gffcl	locus	108506561	108507258	.	-	.	ID=RLOC_00020351;geneIDs=comp139843_c0_seq1.path1;transcripts=comp139843_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108506561	108507258	.	-	.	ID=comp139843_c0_seq1.mrna1;geneID=comp139843_c0_seq1.path1;Name=comp139843_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=698;mismatches=0;indels=0;unknowns=0;Target=comp139843_c0_seq1 698 1 .;CDS_Target=comp139843_c0_seq1 332 3 .;locus=RLOC_00020351
Chr2	stalkie_big_nohaplotig	exon	108506561	108507258	100	-	.	Parent=comp139843_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	108506927	108507256	.	-	0	Parent=comp139843_c0_seq1.mrna1
Chr2	gffcl	locus	108518525	108519062	.	+	.	ID=RLOC_00020352;geneIDs=comp137581_c0_seq1.path1;transcripts=comp137581_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108518525	108519062	.	+	.	ID=comp137581_c0_seq1.mrna1;geneID=comp137581_c0_seq1.path1;Name=comp137581_c0_seq1;Dir=sensecoverage=100.0;identity=98.3;matches=473;mismatches=6;indels=2;unknowns=0;Target=comp137581_c0_seq1 3 113 +;locus=RLOC_00020352
Chr2	stalkie_big_nohaplotig	exon	108518525	108518943	98	+	.	Parent=comp137581_c0_seq1.mrna1;Target=comp137581_c0_seq1 1 421 +
Chr2	stalkie_big_nohaplotig	exon	108519003	108519062	98	+	.	Parent=comp137581_c0_seq1.mrna1;Target=comp137581_c0_seq1 422 481 +
Chr2	stalkie_big_nohaplotig	CDS	108518527	108518636	.	+	0	Parent=comp137581_c0_seq1.mrna1
Chr2	gffcl	locus	108544129	108545793	.	+	.	ID=RLOC_00020353;geneIDs=FBgn0039743.3.path1;transcripts=FBgn0039743.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108544129	108545793	.	+	.	ID=FBgn0039743.3.mrna1;geneID=FBgn0039743.3.path1;Name=FBgn0039743.3;Dir=sensecoverage=100.0;identity=99.9;matches=1403;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020353
Chr2	stalkie_big_nohaplotig	exon	108544129	108544735	99	+	.	Parent=FBgn0039743.3.mrna1;Target=FBgn0039743.3 1 607 +
Chr2	stalkie_big_nohaplotig	exon	108544997	108545793	100	+	.	Parent=FBgn0039743.3.mrna1;Target=FBgn0039743.3 608 1404 +
Chr2	stalkie_big_nohaplotig	CDS	108544129	108544735	.	+	0	Parent=FBgn0039743.3.mrna1;Target=FBgn0039743.3 1 607 +
Chr2	stalkie_big_nohaplotig	CDS	108544997	108545793	.	+	2	Parent=FBgn0039743.3.mrna1;Target=FBgn0039743.3 608 1404 +
Chr2	gffcl	locus	108573661	108605966	.	+	.	ID=RLOC_00020354;geneIDs=FBgn0036985.path1,comp161014_c0_seq1.path1;transcripts=comp161014_c0_seq1.mrna1,FBgn0036985.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108573661	108599317	.	+	.	ID=comp161014_c0_seq1.mrna1;geneID=comp161014_c0_seq1.path1;Name=comp161014_c0_seq1;Dir=antisensecoverage=99.5;identity=99.8;matches=1325;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020354
Chr2	stalkie_big_nohaplotig	exon	108573661	108573794	100	+	.	Parent=comp161014_c0_seq1.mrna1;Target=comp161014_c0_seq1 1194 1327 -
Chr2	stalkie_big_nohaplotig	exon	108580292	108580312	100	+	.	Parent=comp161014_c0_seq1.mrna1;Target=comp161014_c0_seq1 1173 1193 -
Chr2	stalkie_big_nohaplotig	exon	108598029	108598139	100	+	.	Parent=comp161014_c0_seq1.mrna1;Target=comp161014_c0_seq1 1062 1172 -
Chr2	stalkie_big_nohaplotig	exon	108598199	108598437	100	+	.	Parent=comp161014_c0_seq1.mrna1;Target=comp161014_c0_seq1 823 1061 -
Chr2	stalkie_big_nohaplotig	exon	108598496	108599317	99	+	.	Parent=comp161014_c0_seq1.mrna1;Target=comp161014_c0_seq1 1 822 -
Chr2	stalkie_big_nohaplotig	CDS	108598098	108598139	.	+	0	Parent=comp161014_c0_seq1.mrna1;Target=comp161014_c0_seq1 1062 1103 .
Chr2	stalkie_big_nohaplotig	CDS	108598199	108598437	.	+	0	Parent=comp161014_c0_seq1.mrna1;Target=comp161014_c0_seq1 823 1061 .
Chr2	stalkie_big_nohaplotig	CDS	108598496	108599315	.	+	1	Parent=comp161014_c0_seq1.mrna1;Target=comp161014_c0_seq1 3 822 .
Chr2	stalkie_big_nohaplotig	mRNA	108598083	108605966	.	+	.	ID=FBgn0036985.mrna1;geneID=FBgn0036985.path1;Name=FBgn0036985;Dir=sensecoverage=100.0;identity=99.8;matches=1117;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020354
Chr2	stalkie_big_nohaplotig	exon	108598083	108598139	100	+	.	Parent=FBgn0036985.mrna1;Target=FBgn0036985 1 57 +
Chr2	stalkie_big_nohaplotig	exon	108598199	108598437	100	+	.	Parent=FBgn0036985.mrna1;Target=FBgn0036985 58 296 +
Chr2	stalkie_big_nohaplotig	exon	108598496	108599318	99	+	.	Parent=FBgn0036985.mrna1;Target=FBgn0036985 297 1119 +
Chr2	stalkie_big_nohaplotig	exon	108604719	108605966	99	+	.	Parent=FBgn0036985.mrna1;Target=FBgn0036985 1248 1 .
Chr2	stalkie_big_nohaplotig	CDS	108598083	108598139	.	+	0	Parent=FBgn0036985.mrna1;Target=FBgn0036985 1 57 +
Chr2	stalkie_big_nohaplotig	CDS	108598199	108598437	.	+	0	Parent=FBgn0036985.mrna1;Target=FBgn0036985 58 296 +
Chr2	stalkie_big_nohaplotig	CDS	108598496	108599318	.	+	1	Parent=FBgn0036985.mrna1;Target=FBgn0036985 297 1119 +
Chr2	stalkie_big_nohaplotig	CDS	108604719	108605966	.	+	0	Parent=FBgn0036985.mrna1;Target=FBgn0036985 1248 1 .
Chr2	gffcl	locus	108620045	108647252	.	+	.	ID=RLOC_00020356;geneIDs=comp155114_c0_seq1.path1;transcripts=comp155114_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108620045	108647252	.	+	.	ID=comp155114_c0_seq1.mrna1;geneID=comp155114_c0_seq1.path1;Name=comp155114_c0_seq1;Dir=antisensecoverage=99.9;identity=99.6;matches=1356;mismatches=6;indels=0;unknowns=0;Target=comp155114_c0_seq1 325 738 .;locus=RLOC_00020356
Chr2	stalkie_big_nohaplotig	exon	108620045	108620535	100	+	.	Parent=comp155114_c0_seq1.mrna1;Target=comp155114_c0_seq1 872 1362 -
Chr2	stalkie_big_nohaplotig	exon	108644827	108644891	100	+	.	Parent=comp155114_c0_seq1.mrna1;Target=comp155114_c0_seq1 807 871 -
Chr2	stalkie_big_nohaplotig	exon	108646085	108646586	99	+	.	Parent=comp155114_c0_seq1.mrna1;Target=comp155114_c0_seq1 305 806 -
Chr2	stalkie_big_nohaplotig	exon	108646891	108647018	100	+	.	Parent=comp155114_c0_seq1.mrna1;Target=comp155114_c0_seq1 177 304 -
Chr2	stalkie_big_nohaplotig	exon	108647077	108647252	97	+	.	Parent=comp155114_c0_seq1.mrna1;Target=comp155114_c0_seq1 1 176 -
Chr2	stalkie_big_nohaplotig	CDS	108646153	108646566	.	+	0	Parent=comp155114_c0_seq1.mrna1
Chr2	gffcl	locus	108657459	108658940	.	-	.	ID=RLOC_00020357;geneIDs=comp157023_c0_seq1.path1;transcripts=comp157023_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108657459	108658940	.	-	.	ID=comp157023_c0_seq1.mrna1;geneID=comp157023_c0_seq1.path1;Name=comp157023_c0_seq1;Dir=sensecoverage=98.5;identity=96.1;matches=1046;mismatches=4;indels=38;unknowns=0;Target=comp157023_c0_seq1 81 578 +;locus=RLOC_00020357
Chr2	stalkie_big_nohaplotig	exon	108657459	108657581	100	-	.	Parent=comp157023_c0_seq1.mrna1;Target=comp157023_c0_seq1 959 1081 +
Chr2	stalkie_big_nohaplotig	exon	108657650	108657745	100	-	.	Parent=comp157023_c0_seq1.mrna1;Target=comp157023_c0_seq1 863 958 +
Chr2	stalkie_big_nohaplotig	exon	108657804	108657964	84	-	.	Parent=comp157023_c0_seq1.mrna1;Target=comp157023_c0_seq1 687 862 +
Chr2	stalkie_big_nohaplotig	exon	108658183	108658282	100	-	.	Parent=comp157023_c0_seq1.mrna1;Target=comp157023_c0_seq1 587 686 +
Chr2	stalkie_big_nohaplotig	exon	108658364	108658940	97	-	.	Parent=comp157023_c0_seq1.mrna1;Target=comp157023_c0_seq1 1 586 +
Chr2	stalkie_big_nohaplotig	CDS	108658372	108658869	.	-	0	Parent=comp157023_c0_seq1.mrna1
Chr2	gffcl	locus	108688786	108689461	.	-	.	ID=RLOC_00020358;geneIDs=comp97054_c0_seq1.path2;transcripts=comp97054_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	108688786	108689461	.	-	.	ID=comp97054_c0_seq1.mrna2;geneID=comp97054_c0_seq1.path2;Name=comp97054_c0_seq1;Dir=indeterminatecoverage=92.5;identity=100.0;matches=676;mismatches=0;indels=0;unknowns=0;Target=comp97054_c0_seq1 731 56 .;CDS_Target=comp97054_c0_seq1 489 304 .;locus=RLOC_00020358
Chr2	stalkie_big_nohaplotig	exon	108688786	108689461	100	-	.	Parent=comp97054_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	108689028	108689213	.	-	2	Parent=comp97054_c0_seq1.mrna2
Chr2	gffcl	locus	108713838	108714145	.	-	.	ID=RLOC_00020359;geneIDs=comp930690_c0_seq1.path1;transcripts=comp930690_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108713838	108714145	.	-	.	ID=comp930690_c0_seq1.mrna1;geneID=comp930690_c0_seq1.path1;Name=comp930690_c0_seq1;Dir=indeterminatecoverage=99.0;identity=100.0;matches=308;mismatches=0;indels=0;unknowns=0;Target=comp930690_c0_seq1 311 4 .;CDS_Target=comp930690_c0_seq1 281 189 .;locus=RLOC_00020359
Chr2	stalkie_big_nohaplotig	exon	108713838	108714145	100	-	.	Parent=comp930690_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	108713868	108713960	.	-	0	Parent=comp930690_c0_seq1.mrna1
Chr2	gffcl	locus	108738208	108739161	.	-	.	ID=RLOC_00020360;geneIDs=ORF1948.path1;transcripts=ORF1948.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108738208	108739161	.	-	.	ID=ORF1948.mrna1;geneID=ORF1948.path1;Name=ORF1948;Dir=indeterminatecoverage=100.0;identity=99.8;matches=952;mismatches=2;indels=0;unknowns=0;Target=ORF1948 954 1 .;locus=RLOC_00020360
Chr2	stalkie_big_nohaplotig	exon	108738208	108739161	99	-	.	Parent=ORF1948.mrna1
Chr2	stalkie_big_nohaplotig	CDS	108738208	108739161	.	-	0	Parent=ORF1948.mrna1
Chr2	gffcl	locus	108749545	108752212	.	-	.	ID=RLOC_00020361;geneIDs=FBgn0033963.1.path1;transcripts=FBgn0033963.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108749545	108752212	.	-	.	ID=FBgn0033963.1.mrna1;geneID=FBgn0033963.1.path1;Name=FBgn0033963.1;Dir=sensecoverage=100.0;identity=99.7;matches=1447;mismatches=5;indels=0;unknowns=0;locus=RLOC_00020361
Chr2	stalkie_big_nohaplotig	exon	108749545	108750907	99	-	.	Parent=FBgn0033963.1.mrna1;Target=FBgn0033963.1 90 1452 +
Chr2	stalkie_big_nohaplotig	exon	108752124	108752212	100	-	.	Parent=FBgn0033963.1.mrna1;Target=FBgn0033963.1 1 89 +
Chr2	stalkie_big_nohaplotig	CDS	108749545	108750907	.	-	1	Parent=FBgn0033963.1.mrna1;Target=FBgn0033963.1 90 1452 +
Chr2	stalkie_big_nohaplotig	CDS	108752124	108752212	.	-	0	Parent=FBgn0033963.1.mrna1;Target=FBgn0033963.1 1 89 +
Chr2	gffcl	locus	108769415	108770100	.	-	.	ID=RLOC_00020362;geneIDs=comp146871_c0_seq1.path1;transcripts=comp146871_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108769415	108770100	.	-	.	ID=comp146871_c0_seq1.mrna1;geneID=comp146871_c0_seq1.path1;Name=comp146871_c0_seq1;Dir=indeterminatecoverage=96.3;identity=99.6;matches=683;mismatches=3;indels=0;unknowns=0;Target=comp146871_c0_seq1 691 6 .;CDS_Target=comp146871_c0_seq1 492 307 .;locus=RLOC_00020362
Chr2	stalkie_big_nohaplotig	exon	108769415	108770100	99	-	.	Parent=comp146871_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	108769614	108769799	.	-	0	Parent=comp146871_c0_seq1.mrna1
Chr2	gffcl	locus	108857160	108860239	.	-	.	ID=RLOC_00020364;geneIDs=comp149935_c0_seq1.path1;transcripts=comp149935_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108857160	108860239	.	-	.	ID=comp149935_c0_seq1.mrna1;geneID=comp149935_c0_seq1.path1;Name=comp149935_c0_seq1;Dir=antisensecoverage=100.0;identity=98.5;matches=594;mismatches=9;indels=0;unknowns=0;locus=RLOC_00020364
Chr2	stalkie_big_nohaplotig	exon	108857160	108857738	98	-	.	Parent=comp149935_c0_seq1.mrna1;Target=comp149935_c0_seq1 1 579 -
Chr2	stalkie_big_nohaplotig	exon	108860216	108860239	100	-	.	Parent=comp149935_c0_seq1.mrna1;Target=comp149935_c0_seq1 580 603 -
Chr2	stalkie_big_nohaplotig	CDS	108857630	108857738	.	-	1	Parent=comp149935_c0_seq1.mrna1;Target=comp149935_c0_seq1 471 579 .
Chr2	stalkie_big_nohaplotig	CDS	108860216	108860238	.	-	0	Parent=comp149935_c0_seq1.mrna1;Target=comp149935_c0_seq1 580 602 .
Chr2	gffcl	locus	108880270	108886105	.	-	.	ID=RLOC_00020365;geneIDs=ORF185.path1;transcripts=ORF185.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108880270	108886105	.	-	.	ID=ORF185.mrna1;geneID=ORF185.path1;Name=ORF185;Dir=sensecoverage=100.0;identity=99.5;matches=2602;mismatches=9;indels=5;unknowns=0;locus=RLOC_00020365
Chr2	stalkie_big_nohaplotig	exon	108880270	108882572	99	-	.	Parent=ORF185.mrna1;Target=ORF185 314 2616 +
Chr2	stalkie_big_nohaplotig	exon	108882648	108882794	100	-	.	Parent=ORF185.mrna1;Target=ORF185 167 313 +
Chr2	stalkie_big_nohaplotig	exon	108882851	108882912	100	-	.	Parent=ORF185.mrna1;Target=ORF185 105 166 +
Chr2	stalkie_big_nohaplotig	exon	108884983	108884985	100	-	.	Parent=ORF185.mrna1;Target=ORF185 102 104 +
Chr2	stalkie_big_nohaplotig	exon	108885479	108885484	100	-	.	Parent=ORF185.mrna1;Target=ORF185 96 101 +
Chr2	stalkie_big_nohaplotig	exon	108885835	108885894	84	-	.	Parent=ORF185.mrna1;Target=ORF185 31 95 +
Chr2	stalkie_big_nohaplotig	exon	108886076	108886105	100	-	.	Parent=ORF185.mrna1;Target=ORF185 1 30 +
Chr2	stalkie_big_nohaplotig	CDS	108880270	108882572	.	-	2	Parent=ORF185.mrna1;Target=ORF185 314 2616 +
Chr2	stalkie_big_nohaplotig	CDS	108882648	108882794	.	-	2	Parent=ORF185.mrna1;Target=ORF185 167 313 +
Chr2	stalkie_big_nohaplotig	CDS	108882851	108882899	.	-	0	Parent=ORF185.mrna1;Target=ORF185 118 166 +
Chr2	gffcl	locus	108883025	108883856	.	+	.	ID=RLOC_00020366;geneIDs=comp155179_c0_seq1.path1;transcripts=comp155179_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108883025	108883856	.	+	.	ID=comp155179_c0_seq1.mrna1;geneID=comp155179_c0_seq1.path1;Name=comp155179_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.4;matches=827;mismatches=5;indels=0;unknowns=0;Target=comp155179_c0_seq1 832 1 .;CDS_Target=comp155179_c0_seq1 70 2 .;locus=RLOC_00020366
Chr2	stalkie_big_nohaplotig	exon	108883025	108883856	99	+	.	Parent=comp155179_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	108883026	108883094	.	+	0	Parent=comp155179_c0_seq1.mrna1
Chr2	gffcl	locus	108891286	108916300	.	-	.	ID=RLOC_00020367;geneIDs=comp149620_c0_seq1.path1;transcripts=comp149620_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108891286	108916300	.	-	.	ID=comp149620_c0_seq1.mrna1;geneID=comp149620_c0_seq1.path1;Name=comp149620_c0_seq1;Dir=antisensecoverage=100.0;identity=98.0;matches=579;mismatches=8;indels=4;unknowns=0;locus=RLOC_00020367
Chr2	stalkie_big_nohaplotig	exon	108891286	108891339	96	-	.	Parent=comp149620_c0_seq1.mrna1;Target=comp149620_c0_seq1 1 54 -
Chr2	stalkie_big_nohaplotig	exon	108891531	108891687	97	-	.	Parent=comp149620_c0_seq1.mrna1;Target=comp149620_c0_seq1 55 211 -
Chr2	stalkie_big_nohaplotig	exon	108909134	108909209	97	-	.	Parent=comp149620_c0_seq1.mrna1;Target=comp149620_c0_seq1 212 287 -
Chr2	stalkie_big_nohaplotig	exon	108915997	108916300	98	-	.	Parent=comp149620_c0_seq1.mrna1;Target=comp149620_c0_seq1 288 587 -
Chr2	stalkie_big_nohaplotig	CDS	108891543	108891687	.	-	1	Parent=comp149620_c0_seq1.mrna1;Target=comp149620_c0_seq1 67 211 .
Chr2	stalkie_big_nohaplotig	CDS	108909134	108909156	.	-	0	Parent=comp149620_c0_seq1.mrna1;Target=comp149620_c0_seq1 212 234 .
Chr2	gffcl	locus	108935257	108935582	.	-	.	ID=RLOC_00020368;geneIDs=FBgn0024804.2.path2;transcripts=FBgn0024804.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	108935257	108935582	.	-	.	ID=FBgn0024804.2.mrna2;geneID=FBgn0024804.2.path2;Name=FBgn0024804.2;Dir=sensecoverage=18.8;identity=83.8;matches=212;mismatches=41;indels=0;unknowns=0;locus=RLOC_00020368
Chr2	stalkie_big_nohaplotig	exon	108935257	108935392	81	-	.	Parent=FBgn0024804.2.mrna2;Target=FBgn0024804.2 1208 1343 +
Chr2	stalkie_big_nohaplotig	exon	108935466	108935582	86	-	.	Parent=FBgn0024804.2.mrna2;Target=FBgn0024804.2 1091 1207 +
Chr2	stalkie_big_nohaplotig	CDS	108935259	108935392	.	-	1	Parent=FBgn0024804.2.mrna2;Target=FBgn0024804.2 1208 1341 +
Chr2	stalkie_big_nohaplotig	CDS	108935466	108935582	.	-	1	Parent=FBgn0024804.2.mrna2;Target=FBgn0024804.2 1091 1207 +
Chr2	gffcl	locus	108948042	108949394	.	+	.	ID=RLOC_00020369;geneIDs=FBgn0037377.1.path1;transcripts=FBgn0037377.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108948042	108949394	.	+	.	ID=FBgn0037377.1.mrna1;geneID=FBgn0037377.1.path1;Name=FBgn0037377.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1353;mismatches=0;indels=0;unknowns=0;Target=FBgn0037377.1 1353 1 .;locus=RLOC_00020369
Chr2	stalkie_big_nohaplotig	exon	108948042	108949394	100	+	.	Parent=FBgn0037377.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	108948042	108949394	.	+	0	Parent=FBgn0037377.1.mrna1
Chr2	gffcl	locus	108949543	108950358	.	-	.	ID=RLOC_00020370;geneIDs=FBgn0037378.1.path1;transcripts=FBgn0037378.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108949543	108950358	.	-	.	ID=FBgn0037378.1.mrna1;geneID=FBgn0037378.1.path1;Name=FBgn0037378.1;Dir=sensecoverage=100.0;identity=100.0;matches=705;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020370
Chr2	stalkie_big_nohaplotig	exon	108949543	108949712	100	-	.	Parent=FBgn0037378.1.mrna1;Target=FBgn0037378.1 536 705 +
Chr2	stalkie_big_nohaplotig	exon	108949766	108950190	100	-	.	Parent=FBgn0037378.1.mrna1;Target=FBgn0037378.1 111 535 +
Chr2	stalkie_big_nohaplotig	exon	108950249	108950358	100	-	.	Parent=FBgn0037378.1.mrna1;Target=FBgn0037378.1 1 110 +
Chr2	stalkie_big_nohaplotig	CDS	108949543	108949712	.	-	2	Parent=FBgn0037378.1.mrna1;Target=FBgn0037378.1 536 705 +
Chr2	stalkie_big_nohaplotig	CDS	108949766	108950190	.	-	1	Parent=FBgn0037378.1.mrna1;Target=FBgn0037378.1 111 535 +
Chr2	stalkie_big_nohaplotig	CDS	108950249	108950358	.	-	0	Parent=FBgn0037378.1.mrna1;Target=FBgn0037378.1 1 110 +
Chr2	gffcl	locus	108952001	108954043	.	-	.	ID=RLOC_00020371;geneIDs=FBgn0028690.1.path1;transcripts=FBgn0028690.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108952001	108954043	.	-	.	ID=FBgn0028690.1.mrna1;geneID=FBgn0028690.1.path1;Name=FBgn0028690.1;Dir=sensecoverage=100.0;identity=99.9;matches=1493;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020371
Chr2	stalkie_big_nohaplotig	exon	108952001	108952306	100	-	.	Parent=FBgn0028690.1.mrna1;Target=FBgn0028690.1 1189 1494 +
Chr2	stalkie_big_nohaplotig	exon	108952386	108953018	100	-	.	Parent=FBgn0028690.1.mrna1;Target=FBgn0028690.1 556 1188 +
Chr2	stalkie_big_nohaplotig	exon	108953425	108953802	99	-	.	Parent=FBgn0028690.1.mrna1;Target=FBgn0028690.1 178 555 +
Chr2	stalkie_big_nohaplotig	exon	108953867	108954043	100	-	.	Parent=FBgn0028690.1.mrna1;Target=FBgn0028690.1 1 177 +
Chr2	stalkie_big_nohaplotig	CDS	108952001	108952306	.	-	0	Parent=FBgn0028690.1.mrna1;Target=FBgn0028690.1 1189 1494 +
Chr2	stalkie_big_nohaplotig	CDS	108952386	108953018	.	-	0	Parent=FBgn0028690.1.mrna1;Target=FBgn0028690.1 556 1188 +
Chr2	stalkie_big_nohaplotig	CDS	108953425	108953802	.	-	0	Parent=FBgn0028690.1.mrna1;Target=FBgn0028690.1 178 555 +
Chr2	stalkie_big_nohaplotig	CDS	108953867	108954043	.	-	0	Parent=FBgn0028690.1.mrna1;Target=FBgn0028690.1 1 177 +
Chr2	gffcl	locus	108956641	108958985	.	-	.	ID=RLOC_00020372;geneIDs=FBgn0037717.2.path1;transcripts=FBgn0037717.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108956641	108958985	.	-	.	ID=FBgn0037717.2.mrna1;geneID=FBgn0037717.2.path1;Name=FBgn0037717.2;Dir=sensecoverage=100.0;identity=100.0;matches=1896;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020372
Chr2	stalkie_big_nohaplotig	exon	108956641	108956672	100	-	.	Parent=FBgn0037717.2.mrna1;Target=FBgn0037717.2 1865 1896 +
Chr2	stalkie_big_nohaplotig	exon	108956729	108956875	100	-	.	Parent=FBgn0037717.2.mrna1;Target=FBgn0037717.2 1718 1864 +
Chr2	stalkie_big_nohaplotig	exon	108957031	108957378	100	-	.	Parent=FBgn0037717.2.mrna1;Target=FBgn0037717.2 1370 1717 +
Chr2	stalkie_big_nohaplotig	exon	108957440	108957526	100	-	.	Parent=FBgn0037717.2.mrna1;Target=FBgn0037717.2 1283 1369 +
Chr2	stalkie_big_nohaplotig	exon	108957587	108958097	100	-	.	Parent=FBgn0037717.2.mrna1;Target=FBgn0037717.2 772 1282 +
Chr2	stalkie_big_nohaplotig	exon	108958157	108958768	100	-	.	Parent=FBgn0037717.2.mrna1;Target=FBgn0037717.2 160 771 +
Chr2	stalkie_big_nohaplotig	exon	108958827	108958985	100	-	.	Parent=FBgn0037717.2.mrna1;Target=FBgn0037717.2 1 159 +
Chr2	stalkie_big_nohaplotig	CDS	108956641	108956672	.	-	2	Parent=FBgn0037717.2.mrna1;Target=FBgn0037717.2 1865 1896 +
Chr2	stalkie_big_nohaplotig	CDS	108956729	108956875	.	-	2	Parent=FBgn0037717.2.mrna1;Target=FBgn0037717.2 1718 1864 +
Chr2	stalkie_big_nohaplotig	CDS	108957031	108957378	.	-	2	Parent=FBgn0037717.2.mrna1;Target=FBgn0037717.2 1370 1717 +
Chr2	stalkie_big_nohaplotig	CDS	108957440	108957526	.	-	2	Parent=FBgn0037717.2.mrna1;Target=FBgn0037717.2 1283 1369 +
Chr2	stalkie_big_nohaplotig	CDS	108957587	108958097	.	-	0	Parent=FBgn0037717.2.mrna1;Target=FBgn0037717.2 772 1282 +
Chr2	stalkie_big_nohaplotig	CDS	108958157	108958768	.	-	0	Parent=FBgn0037717.2.mrna1;Target=FBgn0037717.2 160 771 +
Chr2	stalkie_big_nohaplotig	CDS	108958827	108958985	.	-	0	Parent=FBgn0037717.2.mrna1;Target=FBgn0037717.2 1 159 +
Chr2	gffcl	locus	108961833	108965950	.	-	.	ID=RLOC_00020373;geneIDs=FBgn0037717.1.path1;transcripts=FBgn0037717.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108961833	108965950	.	-	.	ID=FBgn0037717.1.mrna1;geneID=FBgn0037717.1.path1;Name=FBgn0037717.1;Dir=sensecoverage=100.0;identity=99.9;matches=1792;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020373
Chr2	stalkie_big_nohaplotig	exon	108961833	108961897	100	-	.	Parent=FBgn0037717.1.mrna1;Target=FBgn0037717.1 1730 1794 +
Chr2	stalkie_big_nohaplotig	exon	108961956	108962102	100	-	.	Parent=FBgn0037717.1.mrna1;Target=FBgn0037717.1 1583 1729 +
Chr2	stalkie_big_nohaplotig	exon	108962173	108962616	100	-	.	Parent=FBgn0037717.1.mrna1;Target=FBgn0037717.1 1139 1582 +
Chr2	stalkie_big_nohaplotig	exon	108962682	108962768	100	-	.	Parent=FBgn0037717.1.mrna1;Target=FBgn0037717.1 1052 1138 +
Chr2	stalkie_big_nohaplotig	exon	108962832	108963342	99	-	.	Parent=FBgn0037717.1.mrna1;Target=FBgn0037717.1 541 1051 +
Chr2	stalkie_big_nohaplotig	exon	108965355	108965732	100	-	.	Parent=FBgn0037717.1.mrna1;Target=FBgn0037717.1 163 540 +
Chr2	stalkie_big_nohaplotig	exon	108965789	108965950	100	-	.	Parent=FBgn0037717.1.mrna1;Target=FBgn0037717.1 1 162 +
Chr2	stalkie_big_nohaplotig	CDS	108961833	108961897	.	-	2	Parent=FBgn0037717.1.mrna1;Target=FBgn0037717.1 1730 1794 +
Chr2	stalkie_big_nohaplotig	CDS	108961956	108962102	.	-	2	Parent=FBgn0037717.1.mrna1;Target=FBgn0037717.1 1583 1729 +
Chr2	stalkie_big_nohaplotig	CDS	108962173	108962616	.	-	2	Parent=FBgn0037717.1.mrna1;Target=FBgn0037717.1 1139 1582 +
Chr2	stalkie_big_nohaplotig	CDS	108962682	108962768	.	-	2	Parent=FBgn0037717.1.mrna1;Target=FBgn0037717.1 1052 1138 +
Chr2	stalkie_big_nohaplotig	CDS	108962832	108963342	.	-	0	Parent=FBgn0037717.1.mrna1;Target=FBgn0037717.1 541 1051 +
Chr2	stalkie_big_nohaplotig	CDS	108965355	108965732	.	-	0	Parent=FBgn0037717.1.mrna1;Target=FBgn0037717.1 163 540 +
Chr2	stalkie_big_nohaplotig	CDS	108965789	108965950	.	-	0	Parent=FBgn0037717.1.mrna1;Target=FBgn0037717.1 1 162 +
Chr2	gffcl	locus	108966849	108967109	.	-	.	ID=RLOC_00020374;geneIDs=comp127162_c0_seq1.path1;transcripts=comp127162_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108966849	108967109	.	-	.	ID=comp127162_c0_seq1.mrna1;geneID=comp127162_c0_seq1.path1;Name=comp127162_c0_seq1;Dir=indeterminatecoverage=91.9;identity=100.0;matches=261;mismatches=0;indels=0;unknowns=0;Target=comp127162_c0_seq1 284 24 .;CDS_Target=comp127162_c0_seq1 274 155 .;locus=RLOC_00020374
Chr2	stalkie_big_nohaplotig	exon	108966849	108967109	100	-	.	Parent=comp127162_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	108966859	108966978	.	-	0	Parent=comp127162_c0_seq1.mrna1
Chr2	gffcl	locus	108968523	108970779	.	+	.	ID=RLOC_00020375;geneIDs=FBgn0037376.1.path1;transcripts=FBgn0037376.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108968523	108970779	.	+	.	ID=FBgn0037376.1.mrna1;geneID=FBgn0037376.1.path1;Name=FBgn0037376.1;Dir=sensecoverage=100.0;identity=99.8;matches=1261;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020375
Chr2	stalkie_big_nohaplotig	exon	108968523	108968640	100	+	.	Parent=FBgn0037376.1.mrna1;Target=FBgn0037376.1 1 118 +
Chr2	stalkie_big_nohaplotig	exon	108968699	108969200	99	+	.	Parent=FBgn0037376.1.mrna1;Target=FBgn0037376.1 119 620 +
Chr2	stalkie_big_nohaplotig	exon	108970081	108970438	99	+	.	Parent=FBgn0037376.1.mrna1;Target=FBgn0037376.1 621 978 +
Chr2	stalkie_big_nohaplotig	exon	108970495	108970779	100	+	.	Parent=FBgn0037376.1.mrna1;Target=FBgn0037376.1 979 1263 +
Chr2	stalkie_big_nohaplotig	CDS	108968523	108968640	.	+	0	Parent=FBgn0037376.1.mrna1;Target=FBgn0037376.1 1 118 +
Chr2	stalkie_big_nohaplotig	CDS	108968699	108969200	.	+	2	Parent=FBgn0037376.1.mrna1;Target=FBgn0037376.1 119 620 +
Chr2	stalkie_big_nohaplotig	CDS	108970081	108970438	.	+	1	Parent=FBgn0037376.1.mrna1;Target=FBgn0037376.1 621 978 +
Chr2	stalkie_big_nohaplotig	CDS	108970495	108970779	.	+	0	Parent=FBgn0037376.1.mrna1;Target=FBgn0037376.1 979 1263 +
Chr2	gffcl	locus	108971318	108985588	.	-	.	ID=RLOC_00020376;geneIDs=FBgn0037375.1.path1;transcripts=FBgn0037375.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108971318	108985588	.	-	.	ID=FBgn0037375.1.mrna1;geneID=FBgn0037375.1.path1;Name=FBgn0037375.1;Dir=sensecoverage=100.0;identity=100.0;matches=1761;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020376
Chr2	stalkie_big_nohaplotig	exon	108971318	108971640	100	-	.	Parent=FBgn0037375.1.mrna1;Target=FBgn0037375.1 1439 1761 +
Chr2	stalkie_big_nohaplotig	exon	108971930	108973000	100	-	.	Parent=FBgn0037375.1.mrna1;Target=FBgn0037375.1 368 1438 +
Chr2	stalkie_big_nohaplotig	exon	108973054	108973304	100	-	.	Parent=FBgn0037375.1.mrna1;Target=FBgn0037375.1 117 367 +
Chr2	stalkie_big_nohaplotig	exon	108985473	108985588	100	-	.	Parent=FBgn0037375.1.mrna1;Target=FBgn0037375.1 1 116 +
Chr2	stalkie_big_nohaplotig	CDS	108971318	108971640	.	-	2	Parent=FBgn0037375.1.mrna1;Target=FBgn0037375.1 1439 1761 +
Chr2	stalkie_big_nohaplotig	CDS	108971930	108973000	.	-	2	Parent=FBgn0037375.1.mrna1;Target=FBgn0037375.1 368 1438 +
Chr2	stalkie_big_nohaplotig	CDS	108973054	108973304	.	-	1	Parent=FBgn0037375.1.mrna1;Target=FBgn0037375.1 117 367 +
Chr2	stalkie_big_nohaplotig	CDS	108985473	108985588	.	-	0	Parent=FBgn0037375.1.mrna1;Target=FBgn0037375.1 1 116 +
Chr2	gffcl	locus	108988387	108990408	.	-	.	ID=RLOC_00020377;geneIDs=FBgn0037374.1.path1;transcripts=FBgn0037374.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108988387	108990408	.	-	.	ID=FBgn0037374.1.mrna1;geneID=FBgn0037374.1.path1;Name=FBgn0037374.1;Dir=sensecoverage=100.0;identity=100.0;matches=654;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020377
Chr2	stalkie_big_nohaplotig	exon	108988387	108988515	100	-	.	Parent=FBgn0037374.1.mrna1;Target=FBgn0037374.1 526 654 +
Chr2	stalkie_big_nohaplotig	exon	108988593	108988965	100	-	.	Parent=FBgn0037374.1.mrna1;Target=FBgn0037374.1 153 525 +
Chr2	stalkie_big_nohaplotig	exon	108990257	108990408	100	-	.	Parent=FBgn0037374.1.mrna1;Target=FBgn0037374.1 1 152 +
Chr2	stalkie_big_nohaplotig	CDS	108988387	108988515	.	-	0	Parent=FBgn0037374.1.mrna1;Target=FBgn0037374.1 526 654 +
Chr2	stalkie_big_nohaplotig	CDS	108988593	108988965	.	-	1	Parent=FBgn0037374.1.mrna1;Target=FBgn0037374.1 153 525 +
Chr2	stalkie_big_nohaplotig	CDS	108990257	108990408	.	-	0	Parent=FBgn0037374.1.mrna1;Target=FBgn0037374.1 1 152 +
Chr2	gffcl	locus	108992817	108993720	.	-	.	ID=RLOC_00020378;geneIDs=FBgn0039118.1.path1;transcripts=FBgn0039118.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	108992817	108993720	.	-	.	ID=FBgn0039118.1.mrna1;geneID=FBgn0039118.1.path1;Name=FBgn0039118.1;Dir=sensecoverage=99.5;identity=99.6;matches=839;mismatches=3;indels=0;unknowns=0;locus=RLOC_00020378
Chr2	stalkie_big_nohaplotig	exon	108992817	108993008	100	-	.	Parent=FBgn0039118.1.mrna1;Target=FBgn0039118.1 655 846 +
Chr2	stalkie_big_nohaplotig	exon	108993071	108993720	99	-	.	Parent=FBgn0039118.1.mrna1;Target=FBgn0039118.1 5 654 +
Chr2	stalkie_big_nohaplotig	CDS	108992817	108993008	.	-	0	Parent=FBgn0039118.1.mrna1;Target=FBgn0039118.1 655 846 +
Chr2	stalkie_big_nohaplotig	CDS	108993071	108993718	.	-	0	Parent=FBgn0039118.1.mrna1;Target=FBgn0039118.1 7 654 +
Chr2	stalkie_big_nohaplotig	mRNA	109063200	109064234	.	+	.	ID=comp152389_c0_seq1.mrna1;geneID=comp152389_c0_seq1.path1;Name=comp152389_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1032;mismatches=3;indels=0;unknowns=0;Target=comp152389_c0_seq1 1035 1 .;CDS_Target=comp152389_c0_seq1 287 168 .;locus=RLOC_00020379
Chr2	stalkie_big_nohaplotig	exon	109063200	109064234	99	+	.	Parent=comp152389_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	109063367	109063486	.	+	0	Parent=comp152389_c0_seq1.mrna1
Chr2	gffcl	locus	109059538	109060351	.	+	.	ID=RLOC_00020380;geneIDs=comp150826_c0_seq1.path1;transcripts=comp150826_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109059538	109060351	.	+	.	ID=comp150826_c0_seq1.mrna1;geneID=comp150826_c0_seq1.path1;Name=comp150826_c0_seq1;Dir=indeterminatecoverage=98.7;identity=98.2;matches=805;mismatches=9;indels=6;unknowns=0;Target=comp150826_c0_seq1 831 12 .;CDS_Target=comp150826_c0_seq1 374 168 .;locus=RLOC_00020380
Chr2	stalkie_big_nohaplotig	exon	109059538	109060351	98	+	.	Parent=comp150826_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	109059694	109059900	.	+	0	Parent=comp150826_c0_seq1.mrna1
Chr2	gffcl	locus	109065798	109067419	.	+	.	ID=RLOC_00020381;geneIDs=comp153526_c0_seq1.path1;transcripts=comp153526_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109065798	109067419	.	+	.	ID=comp153526_c0_seq1.mrna1;geneID=comp153526_c0_seq1.path1;Name=comp153526_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.9;matches=1622;mismatches=0;indels=2;unknowns=0;Target=comp153526_c0_seq1 1634 11 .;CDS_Target=comp153526_c0_seq1 1465 1349 .;locus=RLOC_00020381
Chr2	stalkie_big_nohaplotig	exon	109065798	109067419	99	+	.	Parent=comp153526_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	109067135	109067250	.	+	0	Parent=comp153526_c0_seq1.mrna1
Chr2	gffcl	locus	109071291	109074717	.	+	.	ID=RLOC_00020382;geneIDs=FBgn0262603.1.path1;transcripts=FBgn0262603.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109071291	109074717	.	+	.	ID=FBgn0262603.1.mrna1;geneID=FBgn0262603.1.path1;Name=FBgn0262603.1;Dir=sensecoverage=100.0;identity=99.9;matches=2044;mismatches=1;indels=1;unknowns=0;locus=RLOC_00020382
Chr2	stalkie_big_nohaplotig	exon	109071291	109071350	100	+	.	Parent=FBgn0262603.1.mrna1;Target=FBgn0262603.1 1 60 +
Chr2	stalkie_big_nohaplotig	exon	109071610	109071947	100	+	.	Parent=FBgn0262603.1.mrna1;Target=FBgn0262603.1 61 398 +
Chr2	stalkie_big_nohaplotig	exon	109072005	109072758	99	+	.	Parent=FBgn0262603.1.mrna1;Target=FBgn0262603.1 399 1152 +
Chr2	stalkie_big_nohaplotig	exon	109072834	109072958	100	+	.	Parent=FBgn0262603.1.mrna1;Target=FBgn0262603.1 1153 1277 +
Chr2	stalkie_big_nohaplotig	exon	109073812	109074108	100	+	.	Parent=FBgn0262603.1.mrna1;Target=FBgn0262603.1 1278 1574 +
Chr2	stalkie_big_nohaplotig	exon	109074181	109074582	100	+	.	Parent=FBgn0262603.1.mrna1;Target=FBgn0262603.1 1575 1976 +
Chr2	stalkie_big_nohaplotig	exon	109074649	109074717	98	+	.	Parent=FBgn0262603.1.mrna1;Target=FBgn0262603.1 1977 2046 +
Chr2	stalkie_big_nohaplotig	CDS	109071291	109071350	.	+	0	Parent=FBgn0262603.1.mrna1;Target=FBgn0262603.1 1 60 +
Chr2	stalkie_big_nohaplotig	CDS	109071610	109071947	.	+	0	Parent=FBgn0262603.1.mrna1;Target=FBgn0262603.1 61 398 +
Chr2	stalkie_big_nohaplotig	CDS	109072005	109072758	.	+	1	Parent=FBgn0262603.1.mrna1;Target=FBgn0262603.1 399 1152 +
Chr2	stalkie_big_nohaplotig	CDS	109072834	109072958	.	+	0	Parent=FBgn0262603.1.mrna1;Target=FBgn0262603.1 1153 1277 +
Chr2	stalkie_big_nohaplotig	CDS	109073812	109074108	.	+	1	Parent=FBgn0262603.1.mrna1;Target=FBgn0262603.1 1278 1574 +
Chr2	stalkie_big_nohaplotig	CDS	109074181	109074582	.	+	1	Parent=FBgn0262603.1.mrna1;Target=FBgn0262603.1 1575 1976 +
Chr2	stalkie_big_nohaplotig	CDS	109074649	109074717	.	+	1	Parent=FBgn0262603.1.mrna1;Target=FBgn0262603.1 1977 2046 +
Chr2	gffcl	locus	109076458	109076925	.	+	.	ID=RLOC_00020383;geneIDs=comp147624_c0_seq1.path1;transcripts=comp147624_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109076458	109076925	.	+	.	ID=comp147624_c0_seq1.mrna1;geneID=comp147624_c0_seq1.path1;Name=comp147624_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=466;mismatches=2;indels=0;unknowns=0;Target=comp147624_c0_seq1 468 1 .;CDS_Target=comp147624_c0_seq1 387 298 .;locus=RLOC_00020383
Chr2	stalkie_big_nohaplotig	exon	109076458	109076925	99	+	.	Parent=comp147624_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	109076755	109076844	.	+	0	Parent=comp147624_c0_seq1.mrna1
Chr2	gffcl	locus	109080509	109081768	.	+	.	ID=RLOC_00020384;geneIDs=FBgn0037372.1.path1;transcripts=FBgn0037372.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109080509	109081768	.	+	.	ID=FBgn0037372.1.mrna1;geneID=FBgn0037372.1.path1;Name=FBgn0037372.1;Dir=sensecoverage=100.0;identity=100.0;matches=1152;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020384
Chr2	stalkie_big_nohaplotig	exon	109080509	109080956	100	+	.	Parent=FBgn0037372.1.mrna1;Target=FBgn0037372.1 1 448 +
Chr2	stalkie_big_nohaplotig	exon	109081008	109081153	100	+	.	Parent=FBgn0037372.1.mrna1;Target=FBgn0037372.1 449 594 +
Chr2	stalkie_big_nohaplotig	exon	109081211	109081768	100	+	.	Parent=FBgn0037372.1.mrna1;Target=FBgn0037372.1 595 1152 +
Chr2	stalkie_big_nohaplotig	CDS	109080509	109080956	.	+	0	Parent=FBgn0037372.1.mrna1;Target=FBgn0037372.1 1 448 +
Chr2	stalkie_big_nohaplotig	CDS	109081008	109081153	.	+	2	Parent=FBgn0037372.1.mrna1;Target=FBgn0037372.1 449 594 +
Chr2	stalkie_big_nohaplotig	CDS	109081211	109081768	.	+	0	Parent=FBgn0037372.1.mrna1;Target=FBgn0037372.1 595 1152 +
Chr2	gffcl	locus	109082322	109082851	.	+	.	ID=RLOC_00020385;geneIDs=comp153284_c0_seq1.path1;transcripts=comp153284_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109082322	109082851	.	+	.	ID=comp153284_c0_seq1.mrna1;geneID=comp153284_c0_seq1.path1;Name=comp153284_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=530;mismatches=0;indels=0;unknowns=0;Target=comp153284_c0_seq1 530 1 .;CDS_Target=comp153284_c0_seq1 448 380 .;locus=RLOC_00020385
Chr2	stalkie_big_nohaplotig	exon	109082322	109082851	100	+	.	Parent=comp153284_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	109082701	109082769	.	+	0	Parent=comp153284_c0_seq1.mrna1
Chr2	gffcl	locus	109084427	109087070	.	-	.	ID=RLOC_00020386;geneIDs=FBgn0027497.1.path1;transcripts=FBgn0027497.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109084427	109087070	.	-	.	ID=FBgn0027497.1.mrna1;geneID=FBgn0027497.1.path1;Name=FBgn0027497.1;Dir=sensecoverage=100.0;identity=99.9;matches=2098;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020386
Chr2	stalkie_big_nohaplotig	exon	109084427	109085431	99	-	.	Parent=FBgn0027497.1.mrna1;Target=FBgn0027497.1 1096 2100 +
Chr2	stalkie_big_nohaplotig	exon	109085976	109087070	100	-	.	Parent=FBgn0027497.1.mrna1;Target=FBgn0027497.1 1 1095 +
Chr2	stalkie_big_nohaplotig	CDS	109084427	109085431	.	-	0	Parent=FBgn0027497.1.mrna1;Target=FBgn0027497.1 1096 2100 +
Chr2	stalkie_big_nohaplotig	CDS	109085976	109087070	.	-	0	Parent=FBgn0027497.1.mrna1;Target=FBgn0027497.1 1 1095 +
Chr2	gffcl	locus	109090001	109094003	.	+	.	ID=RLOC_00020387;geneIDs=FBgn0037371.1.path1;transcripts=FBgn0037371.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109090001	109094003	.	+	.	ID=FBgn0037371.1.mrna1;geneID=FBgn0037371.1.path1;Name=FBgn0037371.1;Dir=sensecoverage=100.0;identity=99.9;matches=3565;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020387
Chr2	stalkie_big_nohaplotig	exon	109090001	109090141	100	+	.	Parent=FBgn0037371.1.mrna1;Target=FBgn0037371.1 1 141 +
Chr2	stalkie_big_nohaplotig	exon	109090202	109090398	100	+	.	Parent=FBgn0037371.1.mrna1;Target=FBgn0037371.1 142 338 +
Chr2	stalkie_big_nohaplotig	exon	109090453	109091658	100	+	.	Parent=FBgn0037371.1.mrna1;Target=FBgn0037371.1 339 1544 +
Chr2	stalkie_big_nohaplotig	exon	109091806	109092752	99	+	.	Parent=FBgn0037371.1.mrna1;Target=FBgn0037371.1 1545 2491 +
Chr2	stalkie_big_nohaplotig	exon	109092808	109093724	99	+	.	Parent=FBgn0037371.1.mrna1;Target=FBgn0037371.1 2492 3408 +
Chr2	stalkie_big_nohaplotig	exon	109093845	109094003	100	+	.	Parent=FBgn0037371.1.mrna1;Target=FBgn0037371.1 3409 3567 +
Chr2	stalkie_big_nohaplotig	CDS	109090001	109090141	.	+	0	Parent=FBgn0037371.1.mrna1;Target=FBgn0037371.1 1 141 +
Chr2	stalkie_big_nohaplotig	CDS	109090202	109090398	.	+	0	Parent=FBgn0037371.1.mrna1;Target=FBgn0037371.1 142 338 +
Chr2	stalkie_big_nohaplotig	CDS	109090453	109091658	.	+	1	Parent=FBgn0037371.1.mrna1;Target=FBgn0037371.1 339 1544 +
Chr2	stalkie_big_nohaplotig	CDS	109091806	109092752	.	+	1	Parent=FBgn0037371.1.mrna1;Target=FBgn0037371.1 1545 2491 +
Chr2	stalkie_big_nohaplotig	CDS	109092808	109093724	.	+	2	Parent=FBgn0037371.1.mrna1;Target=FBgn0037371.1 2492 3408 +
Chr2	stalkie_big_nohaplotig	CDS	109093845	109094003	.	+	0	Parent=FBgn0037371.1.mrna1;Target=FBgn0037371.1 3409 3567 +
Chr2	gffcl	locus	109094946	109096132	.	-	.	ID=RLOC_00020388;geneIDs=FBgn0037370.1.path1;transcripts=FBgn0037370.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109094946	109096132	.	-	.	ID=FBgn0037370.1.mrna1;geneID=FBgn0037370.1.path1;Name=FBgn0037370.1;Dir=sensecoverage=100.0;identity=100.0;matches=1128;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020388
Chr2	stalkie_big_nohaplotig	exon	109094946	109095846	100	-	.	Parent=FBgn0037370.1.mrna1;Target=FBgn0037370.1 228 1128 +
Chr2	stalkie_big_nohaplotig	exon	109095906	109096132	100	-	.	Parent=FBgn0037370.1.mrna1;Target=FBgn0037370.1 1 227 +
Chr2	stalkie_big_nohaplotig	CDS	109094946	109095846	.	-	1	Parent=FBgn0037370.1.mrna1;Target=FBgn0037370.1 228 1128 +
Chr2	stalkie_big_nohaplotig	CDS	109095906	109096132	.	-	0	Parent=FBgn0037370.1.mrna1;Target=FBgn0037370.1 1 227 +
Chr2	gffcl	locus	109097421	109098906	.	+	.	ID=RLOC_00020389;geneIDs=FBgn0037369.1.path1;transcripts=FBgn0037369.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109097421	109098906	.	+	.	ID=FBgn0037369.1.mrna1;geneID=FBgn0037369.1.path1;Name=FBgn0037369.1;Dir=sensecoverage=99.2;identity=100.0;matches=1428;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020389
Chr2	stalkie_big_nohaplotig	exon	109097421	109098509	100	+	.	Parent=FBgn0037369.1.mrna1;Target=FBgn0037369.1 1 1089 +
Chr2	stalkie_big_nohaplotig	exon	109098568	109098906	100	+	.	Parent=FBgn0037369.1.mrna1;Target=FBgn0037369.1 1090 1428 +
Chr2	stalkie_big_nohaplotig	CDS	109097421	109098509	.	+	0	Parent=FBgn0037369.1.mrna1;Target=FBgn0037369.1 1 1089 +
Chr2	stalkie_big_nohaplotig	CDS	109098568	109098906	.	+	0	Parent=FBgn0037369.1.mrna1;Target=FBgn0037369.1 1090 1428 +
Chr2	gffcl	locus	109099019	109100064	.	-	.	ID=RLOC_00020390;geneIDs=FBgn0037368.1.path1;transcripts=FBgn0037368.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109099019	109100064	.	-	.	ID=FBgn0037368.1.mrna1;geneID=FBgn0037368.1.path1;Name=FBgn0037368.1;Dir=sensecoverage=100.0;identity=99.7;matches=984;mismatches=3;indels=0;unknowns=0;locus=RLOC_00020390
Chr2	stalkie_big_nohaplotig	exon	109099019	109099180	100	-	.	Parent=FBgn0037368.1.mrna1;Target=FBgn0037368.1 826 987 +
Chr2	stalkie_big_nohaplotig	exon	109099240	109100064	99	-	.	Parent=FBgn0037368.1.mrna1;Target=FBgn0037368.1 1 825 +
Chr2	stalkie_big_nohaplotig	CDS	109099019	109099180	.	-	0	Parent=FBgn0037368.1.mrna1;Target=FBgn0037368.1 826 987 +
Chr2	stalkie_big_nohaplotig	CDS	109099240	109100064	.	-	0	Parent=FBgn0037368.1.mrna1;Target=FBgn0037368.1 1 825 +
Chr2	gffcl	locus	109159020	109164854	.	+	.	ID=RLOC_00020391;geneIDs=FBgn0004878.1.path1;transcripts=FBgn0004878.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109159020	109164854	.	+	.	ID=FBgn0004878.1.mrna1;geneID=FBgn0004878.1.path1;Name=FBgn0004878.1;Dir=sensecoverage=99.8;identity=99.7;matches=1725;mismatches=6;indels=0;unknowns=0;locus=RLOC_00020391
Chr2	stalkie_big_nohaplotig	exon	109159020	109159193	99	+	.	Parent=FBgn0004878.1.mrna1;Target=FBgn0004878.1 4 177 +
Chr2	stalkie_big_nohaplotig	exon	109162977	109163733	99	+	.	Parent=FBgn0004878.1.mrna1;Target=FBgn0004878.1 178 934 +
Chr2	stalkie_big_nohaplotig	exon	109163807	109164168	100	+	.	Parent=FBgn0004878.1.mrna1;Target=FBgn0004878.1 935 1296 +
Chr2	stalkie_big_nohaplotig	exon	109164417	109164854	99	+	.	Parent=FBgn0004878.1.mrna1;Target=FBgn0004878.1 1297 1734 +
Chr2	stalkie_big_nohaplotig	CDS	109159020	109159193	.	+	0	Parent=FBgn0004878.1.mrna1;Target=FBgn0004878.1 4 177 +
Chr2	stalkie_big_nohaplotig	CDS	109162977	109163733	.	+	0	Parent=FBgn0004878.1.mrna1;Target=FBgn0004878.1 178 934 +
Chr2	stalkie_big_nohaplotig	CDS	109163807	109164168	.	+	2	Parent=FBgn0004878.1.mrna1;Target=FBgn0004878.1 935 1296 +
Chr2	stalkie_big_nohaplotig	CDS	109164417	109164854	.	+	0	Parent=FBgn0004878.1.mrna1;Target=FBgn0004878.1 1297 1734 +
Chr2	gffcl	locus	109207465	109743806	.	+	.	ID=RLOC_00020392;geneIDs=comp148659_c0_seq1.path1;transcripts=comp148659_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109207465	109743806	.	+	.	ID=comp148659_c0_seq1.mrna1;geneID=comp148659_c0_seq1.path1;Name=comp148659_c0_seq1;Dir=indeterminatecoverage=87.3;identity=100.0;matches=778;mismatches=0;indels=0;unknowns=0;Target=comp148659_c0_seq1 726 631 .;locus=RLOC_00020392
Chr2	stalkie_big_nohaplotig	exon	109207465	109208222	100	+	.	Parent=comp148659_c0_seq1.mrna1;Target=comp148659_c0_seq1 789 32 .
Chr2	stalkie_big_nohaplotig	exon	109725858	109725860	100	+	.	Parent=comp148659_c0_seq1.mrna1;Target=comp148659_c0_seq1 792 790 .
Chr2	stalkie_big_nohaplotig	exon	109741449	109741459	100	+	.	Parent=comp148659_c0_seq1.mrna1;Target=comp148659_c0_seq1 803 793 .
Chr2	stalkie_big_nohaplotig	exon	109743801	109743806	100	+	.	Parent=comp148659_c0_seq1.mrna1;Target=comp148659_c0_seq1 809 804 .
Chr2	stalkie_big_nohaplotig	CDS	109208064	109208159	.	+	0	Parent=comp148659_c0_seq1.mrna1
Chr2	gffcl	locus	109208837	109272820	.	-	.	ID=RLOC_00020393;geneIDs=FBgn0261261.1.path1;transcripts=FBgn0261261.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109208837	109272820	.	-	.	ID=FBgn0261261.1.mrna1;geneID=FBgn0261261.1.path1;Name=FBgn0261261.1;Dir=sensecoverage=100.0;identity=99.9;matches=4637;mismatches=4;indels=0;unknowns=0;locus=RLOC_00020393
Chr2	stalkie_big_nohaplotig	exon	109208837	109209907	100	-	.	Parent=FBgn0261261.1.mrna1;Target=FBgn0261261.1 3571 4641 +
Chr2	stalkie_big_nohaplotig	exon	109209963	109210109	100	-	.	Parent=FBgn0261261.1.mrna1;Target=FBgn0261261.1 3424 3570 +
Chr2	stalkie_big_nohaplotig	exon	109210168	109210590	100	-	.	Parent=FBgn0261261.1.mrna1;Target=FBgn0261261.1 3001 3423 +
Chr2	stalkie_big_nohaplotig	exon	109210650	109211242	99	-	.	Parent=FBgn0261261.1.mrna1;Target=FBgn0261261.1 2408 3000 +
Chr2	stalkie_big_nohaplotig	exon	109211306	109211448	100	-	.	Parent=FBgn0261261.1.mrna1;Target=FBgn0261261.1 2265 2407 +
Chr2	stalkie_big_nohaplotig	exon	109212130	109213029	99	-	.	Parent=FBgn0261261.1.mrna1;Target=FBgn0261261.1 1365 2264 +
Chr2	stalkie_big_nohaplotig	exon	109214350	109214846	99	-	.	Parent=FBgn0261261.1.mrna1;Target=FBgn0261261.1 868 1364 +
Chr2	stalkie_big_nohaplotig	exon	109214920	109215201	99	-	.	Parent=FBgn0261261.1.mrna1;Target=FBgn0261261.1 586 867 +
Chr2	stalkie_big_nohaplotig	exon	109250281	109250733	100	-	.	Parent=FBgn0261261.1.mrna1;Target=FBgn0261261.1 133 585 +
Chr2	stalkie_big_nohaplotig	exon	109272689	109272820	100	-	.	Parent=FBgn0261261.1.mrna1;Target=FBgn0261261.1 1 132 +
Chr2	stalkie_big_nohaplotig	CDS	109208837	109209907	.	-	0	Parent=FBgn0261261.1.mrna1;Target=FBgn0261261.1 3571 4641 +
Chr2	stalkie_big_nohaplotig	CDS	109209963	109210109	.	-	0	Parent=FBgn0261261.1.mrna1;Target=FBgn0261261.1 3424 3570 +
Chr2	stalkie_big_nohaplotig	CDS	109210168	109210590	.	-	0	Parent=FBgn0261261.1.mrna1;Target=FBgn0261261.1 3001 3423 +
Chr2	stalkie_big_nohaplotig	CDS	109210650	109211242	.	-	2	Parent=FBgn0261261.1.mrna1;Target=FBgn0261261.1 2408 3000 +
Chr2	stalkie_big_nohaplotig	CDS	109211306	109211448	.	-	1	Parent=FBgn0261261.1.mrna1;Target=FBgn0261261.1 2265 2407 +
Chr2	stalkie_big_nohaplotig	CDS	109212130	109213029	.	-	1	Parent=FBgn0261261.1.mrna1;Target=FBgn0261261.1 1365 2264 +
Chr2	stalkie_big_nohaplotig	CDS	109214350	109214846	.	-	0	Parent=FBgn0261261.1.mrna1;Target=FBgn0261261.1 868 1364 +
Chr2	stalkie_big_nohaplotig	CDS	109214920	109215201	.	-	0	Parent=FBgn0261261.1.mrna1;Target=FBgn0261261.1 586 867 +
Chr2	stalkie_big_nohaplotig	CDS	109250281	109250733	.	-	0	Parent=FBgn0261261.1.mrna1;Target=FBgn0261261.1 133 585 +
Chr2	stalkie_big_nohaplotig	CDS	109272689	109272820	.	-	0	Parent=FBgn0261261.1.mrna1;Target=FBgn0261261.1 1 132 +
Chr2	gffcl	locus	109277079	109277823	.	+	.	ID=RLOC_00020394;geneIDs=comp148851_c0_seq1.path1;transcripts=comp148851_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109277079	109277823	.	+	.	ID=comp148851_c0_seq1.mrna1;geneID=comp148851_c0_seq1.path1;Name=comp148851_c0_seq1;Dir=antisensecoverage=98.2;identity=100.0;matches=617;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020394
Chr2	stalkie_big_nohaplotig	exon	109277079	109277197	100	+	.	Parent=comp148851_c0_seq1.mrna1;Target=comp148851_c0_seq1 504 622 -
Chr2	stalkie_big_nohaplotig	exon	109277266	109277472	100	+	.	Parent=comp148851_c0_seq1.mrna1;Target=comp148851_c0_seq1 297 503 -
Chr2	stalkie_big_nohaplotig	exon	109277533	109277823	100	+	.	Parent=comp148851_c0_seq1.mrna1;Target=comp148851_c0_seq1 6 296 -
Chr2	stalkie_big_nohaplotig	CDS	109277080	109277197	.	+	0	Parent=comp148851_c0_seq1.mrna1;Target=comp148851_c0_seq1 504 621 .
Chr2	stalkie_big_nohaplotig	CDS	109277266	109277472	.	+	2	Parent=comp148851_c0_seq1.mrna1;Target=comp148851_c0_seq1 297 503 .
Chr2	stalkie_big_nohaplotig	CDS	109277533	109277759	.	+	2	Parent=comp148851_c0_seq1.mrna1;Target=comp148851_c0_seq1 70 296 .
Chr2	gffcl	locus	109284026	109284778	.	-	.	ID=RLOC_00020395;geneIDs=comp156553_c0_seq1.path1;transcripts=comp156553_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109284026	109284778	.	-	.	ID=comp156553_c0_seq1.mrna1;geneID=comp156553_c0_seq1.path1;Name=comp156553_c0_seq1;Dir=sensecoverage=100.0;identity=99.1;matches=533;mismatches=5;indels=0;unknowns=0;locus=RLOC_00020395
Chr2	stalkie_big_nohaplotig	exon	109284026	109284411	99	-	.	Parent=comp156553_c0_seq1.mrna1;Target=comp156553_c0_seq1 153 538 +
Chr2	stalkie_big_nohaplotig	exon	109284627	109284778	97	-	.	Parent=comp156553_c0_seq1.mrna1;Target=comp156553_c0_seq1 1 152 +
Chr2	stalkie_big_nohaplotig	CDS	109284027	109284411	.	-	1	Parent=comp156553_c0_seq1.mrna1;Target=comp156553_c0_seq1 153 537 +
Chr2	stalkie_big_nohaplotig	CDS	109284627	109284661	.	-	0	Parent=comp156553_c0_seq1.mrna1;Target=comp156553_c0_seq1 118 152 +
Chr2	gffcl	locus	109319078	109319745	.	+	.	ID=RLOC_00020396;geneIDs=FBgn0014380.1.path1;transcripts=FBgn0014380.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109319078	109319745	.	+	.	ID=FBgn0014380.1.mrna1;geneID=FBgn0014380.1.path1;Name=FBgn0014380.1;Dir=sensecoverage=100.0;identity=100.0;matches=582;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020396
Chr2	stalkie_big_nohaplotig	exon	109319078	109319338	100	+	.	Parent=FBgn0014380.1.mrna1;Target=FBgn0014380.1 1 261 +
Chr2	stalkie_big_nohaplotig	exon	109319425	109319745	100	+	.	Parent=FBgn0014380.1.mrna1;Target=FBgn0014380.1 262 582 +
Chr2	stalkie_big_nohaplotig	CDS	109319078	109319338	.	+	0	Parent=FBgn0014380.1.mrna1;Target=FBgn0014380.1 1 261 +
Chr2	stalkie_big_nohaplotig	CDS	109319425	109319745	.	+	0	Parent=FBgn0014380.1.mrna1;Target=FBgn0014380.1 262 582 +
Chr2	gffcl	locus	109321977	109322885	.	+	.	ID=RLOC_00020397;geneIDs=FBgn0000617.1.path1;transcripts=FBgn0000617.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109321977	109322885	.	+	.	ID=FBgn0000617.1.mrna1;geneID=FBgn0000617.1.path1;Name=FBgn0000617.1;Dir=sensecoverage=100.0;identity=99.9;matches=797;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020397
Chr2	stalkie_big_nohaplotig	exon	109321977	109322166	99	+	.	Parent=FBgn0000617.1.mrna1;Target=FBgn0000617.1 1 190 +
Chr2	stalkie_big_nohaplotig	exon	109322220	109322356	100	+	.	Parent=FBgn0000617.1.mrna1;Target=FBgn0000617.1 191 327 +
Chr2	stalkie_big_nohaplotig	exon	109322415	109322885	100	+	.	Parent=FBgn0000617.1.mrna1;Target=FBgn0000617.1 328 798 +
Chr2	stalkie_big_nohaplotig	CDS	109321977	109322166	.	+	0	Parent=FBgn0000617.1.mrna1;Target=FBgn0000617.1 1 190 +
Chr2	stalkie_big_nohaplotig	CDS	109322220	109322356	.	+	2	Parent=FBgn0000617.1.mrna1;Target=FBgn0000617.1 191 327 +
Chr2	stalkie_big_nohaplotig	CDS	109322415	109322885	.	+	0	Parent=FBgn0000617.1.mrna1;Target=FBgn0000617.1 328 798 +
Chr2	gffcl	locus	109323031	109324297	.	-	.	ID=RLOC_00020398;geneIDs=FBgn0030871.1.path1;transcripts=FBgn0030871.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109323031	109324297	.	-	.	ID=FBgn0030871.1.mrna1;geneID=FBgn0030871.1.path1;Name=FBgn0030871.1;Dir=sensecoverage=100.0;identity=100.0;matches=1092;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020398
Chr2	stalkie_big_nohaplotig	exon	109323031	109323120	100	-	.	Parent=FBgn0030871.1.mrna1;Target=FBgn0030871.1 1003 1092 +
Chr2	stalkie_big_nohaplotig	exon	109323182	109324049	100	-	.	Parent=FBgn0030871.1.mrna1;Target=FBgn0030871.1 135 1002 +
Chr2	stalkie_big_nohaplotig	exon	109324164	109324297	100	-	.	Parent=FBgn0030871.1.mrna1;Target=FBgn0030871.1 1 134 +
Chr2	stalkie_big_nohaplotig	CDS	109323031	109323120	.	-	0	Parent=FBgn0030871.1.mrna1;Target=FBgn0030871.1 1003 1092 +
Chr2	stalkie_big_nohaplotig	CDS	109323182	109324049	.	-	1	Parent=FBgn0030871.1.mrna1;Target=FBgn0030871.1 135 1002 +
Chr2	stalkie_big_nohaplotig	CDS	109324164	109324297	.	-	0	Parent=FBgn0030871.1.mrna1;Target=FBgn0030871.1 1 134 +
Chr2	gffcl	locus	109325347	109326540	.	+	.	ID=RLOC_00020399;geneIDs=FBgn0039212.1.path1;transcripts=FBgn0039212.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109325347	109326540	.	+	.	ID=FBgn0039212.1.mrna1;geneID=FBgn0039212.1.path1;Name=FBgn0039212.1;Dir=sensecoverage=100.0;identity=99.9;matches=1127;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020399
Chr2	stalkie_big_nohaplotig	exon	109325347	109326288	99	+	.	Parent=FBgn0039212.1.mrna1;Target=FBgn0039212.1 1 942 +
Chr2	stalkie_big_nohaplotig	exon	109326355	109326540	100	+	.	Parent=FBgn0039212.1.mrna1;Target=FBgn0039212.1 943 1128 +
Chr2	stalkie_big_nohaplotig	CDS	109325347	109326288	.	+	0	Parent=FBgn0039212.1.mrna1;Target=FBgn0039212.1 1 942 +
Chr2	stalkie_big_nohaplotig	CDS	109326355	109326540	.	+	0	Parent=FBgn0039212.1.mrna1;Target=FBgn0039212.1 943 1128 +
Chr2	gffcl	locus	109330100	109343880	.	-	.	ID=RLOC_00020400;geneIDs=FBgn0263490.path1;transcripts=FBgn0263490.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109330100	109343880	.	-	.	ID=FBgn0263490.mrna1;geneID=FBgn0263490.path1;Name=FBgn0263490;Dir=sensecoverage=100.0;identity=99.8;matches=1099;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020400
Chr2	stalkie_big_nohaplotig	exon	109330100	109330326	99	-	.	Parent=FBgn0263490.mrna1;Target=FBgn0263490 875 1101 +
Chr2	stalkie_big_nohaplotig	exon	109338745	109339377	100	-	.	Parent=FBgn0263490.mrna1;Target=FBgn0263490 242 874 +
Chr2	stalkie_big_nohaplotig	exon	109339467	109339571	100	-	.	Parent=FBgn0263490.mrna1;Target=FBgn0263490 137 241 +
Chr2	stalkie_big_nohaplotig	exon	109343745	109343880	100	-	.	Parent=FBgn0263490.mrna1;Target=FBgn0263490 1 136 +
Chr2	stalkie_big_nohaplotig	CDS	109330100	109330326	.	-	2	Parent=FBgn0263490.mrna1;Target=FBgn0263490 875 1101 +
Chr2	stalkie_big_nohaplotig	CDS	109338745	109339377	.	-	2	Parent=FBgn0263490.mrna1;Target=FBgn0263490 242 874 +
Chr2	stalkie_big_nohaplotig	CDS	109339467	109339571	.	-	2	Parent=FBgn0263490.mrna1;Target=FBgn0263490 137 241 +
Chr2	stalkie_big_nohaplotig	CDS	109343745	109343880	.	-	0	Parent=FBgn0263490.mrna1;Target=FBgn0263490 1 136 +
Chr2	gffcl	locus	109345564	109453599	.	-	.	ID=RLOC_00020401;geneIDs=comp163107_c1_seq1.path2;transcripts=comp163107_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	109345564	109453599	.	-	.	ID=comp163107_c1_seq1.mrna2;geneID=comp163107_c1_seq1.path2;Name=comp163107_c1_seq1;Dir=sensecoverage=99.2;identity=99.0;matches=5584;mismatches=24;indels=34;unknowns=0;locus=RLOC_00020401
Chr2	stalkie_big_nohaplotig	exon	109345564	109350126	98	-	.	Parent=comp163107_c1_seq1.mrna2;Target=comp163107_c1_seq1 1123 5659 +
Chr2	stalkie_big_nohaplotig	exon	109452525	109453599	99	-	.	Parent=comp163107_c1_seq1.mrna2;Target=comp163107_c1_seq1 48 1122 +
Chr2	stalkie_big_nohaplotig	CDS	109348760	109350126	.	-	0	Parent=comp163107_c1_seq1.mrna2;Target=comp163107_c1_seq1 1123 2490 +
Chr2	stalkie_big_nohaplotig	CDS	109452525	109453247	.	-	0	Parent=comp163107_c1_seq1.mrna2;Target=comp163107_c1_seq1 400 1122 +
Chr2	gffcl	locus	109454762	109456151	.	+	.	ID=RLOC_00020402;geneIDs=comp118268_c1_seq1.path1,comp139222_c0_seq1.path1;transcripts=comp118268_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109454762	109455480	.	+	.	ID=comp118268_c1_seq1.mrna1;geneID=comp118268_c1_seq1.path1;Name=comp118268_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=718;mismatches=1;indels=0;unknowns=0;Target=comp118268_c1_seq1 719 1 .;CDS_Target=comp118268_c1_seq1 234 1 .;locus=RLOC_00020402
Chr2	stalkie_big_nohaplotig	exon	109454762	109455480	99	+	.	Parent=comp118268_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	109454762	109454995	.	+	0	Parent=comp118268_c1_seq1.mrna1
Chr2	gffcl	locus	109462727	109464510	.	+	.	ID=RLOC_00020403;geneIDs=FBgn0039210.1.path1;transcripts=FBgn0039210.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109462727	109464510	.	+	.	ID=FBgn0039210.1.mrna1;geneID=FBgn0039210.1.path1;Name=FBgn0039210.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1780;mismatches=4;indels=1;unknowns=0;Target=FBgn0039210.1 1785 1 .;CDS_Target=FBgn0039210.1 161 3 .;locus=RLOC_00020403
Chr2	stalkie_big_nohaplotig	exon	109462727	109464510	99	+	.	Parent=FBgn0039210.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	109462729	109462886	.	+	0	Parent=FBgn0039210.1.mrna1
Chr2	gffcl	locus	109470194	109472506	.	+	.	ID=RLOC_00020404;geneIDs=ORF792.path1;transcripts=ORF792.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109470194	109472506	.	+	.	ID=ORF792.mrna1;geneID=ORF792.path1;Name=ORF792;Dir=sensecoverage=100.0;identity=99.9;matches=1427;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020404
Chr2	stalkie_big_nohaplotig	exon	109470194	109470313	100	+	.	Parent=ORF792.mrna1;Target=ORF792 1 120 +
Chr2	stalkie_big_nohaplotig	exon	109470384	109470589	100	+	.	Parent=ORF792.mrna1;Target=ORF792 121 326 +
Chr2	stalkie_big_nohaplotig	exon	109470650	109470779	100	+	.	Parent=ORF792.mrna1;Target=ORF792 327 456 +
Chr2	stalkie_big_nohaplotig	exon	109471344	109471406	100	+	.	Parent=ORF792.mrna1;Target=ORF792 457 519 +
Chr2	stalkie_big_nohaplotig	exon	109471476	109471681	100	+	.	Parent=ORF792.mrna1;Target=ORF792 520 725 +
Chr2	stalkie_big_nohaplotig	exon	109471745	109471874	100	+	.	Parent=ORF792.mrna1;Target=ORF792 726 855 +
Chr2	stalkie_big_nohaplotig	exon	109471934	109472506	99	+	.	Parent=ORF792.mrna1;Target=ORF792 856 1428 +
Chr2	stalkie_big_nohaplotig	CDS	109470194	109470313	.	+	0	Parent=ORF792.mrna1;Target=ORF792 1 120 +
Chr2	stalkie_big_nohaplotig	CDS	109470384	109470589	.	+	0	Parent=ORF792.mrna1;Target=ORF792 121 326 +
Chr2	stalkie_big_nohaplotig	CDS	109470650	109470779	.	+	1	Parent=ORF792.mrna1;Target=ORF792 327 456 +
Chr2	stalkie_big_nohaplotig	CDS	109471344	109471406	.	+	0	Parent=ORF792.mrna1;Target=ORF792 457 519 +
Chr2	stalkie_big_nohaplotig	CDS	109471476	109471681	.	+	0	Parent=ORF792.mrna1;Target=ORF792 520 725 +
Chr2	stalkie_big_nohaplotig	CDS	109471745	109471874	.	+	1	Parent=ORF792.mrna1;Target=ORF792 726 855 +
Chr2	stalkie_big_nohaplotig	CDS	109471934	109472506	.	+	0	Parent=ORF792.mrna1;Target=ORF792 856 1428 +
Chr2	gffcl	locus	109504254	109504979	.	-	.	ID=RLOC_00020405;geneIDs=comp150190_c0_seq1.path1;transcripts=comp150190_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109504254	109504979	.	-	.	ID=comp150190_c0_seq1.mrna1;geneID=comp150190_c0_seq1.path1;Name=comp150190_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=670;mismatches=0;indels=0;unknowns=0;Target=comp150190_c0_seq1 78 188 +;locus=RLOC_00020405
Chr2	stalkie_big_nohaplotig	exon	109504254	109504330	100	-	.	Parent=comp150190_c0_seq1.mrna1;Target=comp150190_c0_seq1 594 670 +
Chr2	stalkie_big_nohaplotig	exon	109504387	109504979	100	-	.	Parent=comp150190_c0_seq1.mrna1;Target=comp150190_c0_seq1 1 593 +
Chr2	stalkie_big_nohaplotig	CDS	109504792	109504902	.	-	0	Parent=comp150190_c0_seq1.mrna1
Chr2	gffcl	locus	109539482	109542080	.	+	.	ID=RLOC_00020406;geneIDs=FBgn0039209.path1;transcripts=FBgn0039209.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109539482	109542080	.	+	.	ID=FBgn0039209.mrna1;geneID=FBgn0039209.path1;Name=FBgn0039209;Dir=sensecoverage=100.0;identity=100.0;matches=1431;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020406
Chr2	stalkie_big_nohaplotig	exon	109539482	109539667	100	+	.	Parent=FBgn0039209.mrna1;Target=FBgn0039209 1 186 +
Chr2	stalkie_big_nohaplotig	exon	109539729	109540266	100	+	.	Parent=FBgn0039209.mrna1;Target=FBgn0039209 187 724 +
Chr2	stalkie_big_nohaplotig	exon	109540321	109540541	100	+	.	Parent=FBgn0039209.mrna1;Target=FBgn0039209 725 945 +
Chr2	stalkie_big_nohaplotig	exon	109540662	109540917	100	+	.	Parent=FBgn0039209.mrna1;Target=FBgn0039209 946 1201 +
Chr2	stalkie_big_nohaplotig	exon	109541782	109541907	100	+	.	Parent=FBgn0039209.mrna1;Target=FBgn0039209 1202 1327 +
Chr2	stalkie_big_nohaplotig	exon	109541977	109542080	100	+	.	Parent=FBgn0039209.mrna1;Target=FBgn0039209 1328 1431 +
Chr2	stalkie_big_nohaplotig	CDS	109539482	109539667	.	+	0	Parent=FBgn0039209.mrna1;Target=FBgn0039209 1 186 +
Chr2	stalkie_big_nohaplotig	CDS	109539729	109540266	.	+	0	Parent=FBgn0039209.mrna1;Target=FBgn0039209 187 724 +
Chr2	stalkie_big_nohaplotig	CDS	109540321	109540541	.	+	2	Parent=FBgn0039209.mrna1;Target=FBgn0039209 725 945 +
Chr2	stalkie_big_nohaplotig	CDS	109540662	109540917	.	+	0	Parent=FBgn0039209.mrna1;Target=FBgn0039209 946 1201 +
Chr2	stalkie_big_nohaplotig	CDS	109541782	109541907	.	+	2	Parent=FBgn0039209.mrna1;Target=FBgn0039209 1202 1327 +
Chr2	stalkie_big_nohaplotig	CDS	109541977	109542080	.	+	2	Parent=FBgn0039209.mrna1;Target=FBgn0039209 1328 1431 +
Chr2	gffcl	locus	109554547	109554831	.	+	.	ID=RLOC_00020407;geneIDs=comp115290_c0_seq1.path1;transcripts=comp115290_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109554547	109554831	.	+	.	ID=comp115290_c0_seq1.mrna1;geneID=comp115290_c0_seq1.path1;Name=comp115290_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=285;mismatches=0;indels=0;unknowns=0;Target=comp115290_c0_seq1 285 1 .;CDS_Target=comp115290_c0_seq1 85 2 .;locus=RLOC_00020407
Chr2	stalkie_big_nohaplotig	exon	109554547	109554831	100	+	.	Parent=comp115290_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	109554548	109554631	.	+	0	Parent=comp115290_c0_seq1.mrna1
Chr2	gffcl	locus	109554970	109578713	.	-	.	ID=RLOC_00020408;geneIDs=FBgn0039208.1.path1;transcripts=FBgn0039208.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109554970	109578713	.	-	.	ID=FBgn0039208.1.mrna1;geneID=FBgn0039208.1.path1;Name=FBgn0039208.1;Dir=sensecoverage=100.0;identity=99.9;matches=2590;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020408
Chr2	stalkie_big_nohaplotig	exon	109554970	109555053	100	-	.	Parent=FBgn0039208.1.mrna1;Target=FBgn0039208.1 2509 2592 +
Chr2	stalkie_big_nohaplotig	exon	109559373	109559885	99	-	.	Parent=FBgn0039208.1.mrna1;Target=FBgn0039208.1 1996 2508 +
Chr2	stalkie_big_nohaplotig	exon	109559952	109560416	100	-	.	Parent=FBgn0039208.1.mrna1;Target=FBgn0039208.1 1531 1995 +
Chr2	stalkie_big_nohaplotig	exon	109561285	109561461	100	-	.	Parent=FBgn0039208.1.mrna1;Target=FBgn0039208.1 1354 1530 +
Chr2	stalkie_big_nohaplotig	exon	109561612	109561660	100	-	.	Parent=FBgn0039208.1.mrna1;Target=FBgn0039208.1 1305 1353 +
Chr2	stalkie_big_nohaplotig	exon	109568819	109568904	100	-	.	Parent=FBgn0039208.1.mrna1;Target=FBgn0039208.1 1219 1304 +
Chr2	stalkie_big_nohaplotig	exon	109569241	109569411	100	-	.	Parent=FBgn0039208.1.mrna1;Target=FBgn0039208.1 1048 1218 +
Chr2	stalkie_big_nohaplotig	exon	109569483	109570034	100	-	.	Parent=FBgn0039208.1.mrna1;Target=FBgn0039208.1 496 1047 +
Chr2	stalkie_big_nohaplotig	exon	109570104	109570145	97	-	.	Parent=FBgn0039208.1.mrna1;Target=FBgn0039208.1 454 495 +
Chr2	stalkie_big_nohaplotig	exon	109574578	109575010	100	-	.	Parent=FBgn0039208.1.mrna1;Target=FBgn0039208.1 21 453 +
Chr2	stalkie_big_nohaplotig	exon	109578694	109578713	100	-	.	Parent=FBgn0039208.1.mrna1;Target=FBgn0039208.1 1 20 +
Chr2	stalkie_big_nohaplotig	CDS	109554970	109555053	.	-	0	Parent=FBgn0039208.1.mrna1;Target=FBgn0039208.1 2509 2592 +
Chr2	stalkie_big_nohaplotig	CDS	109559373	109559885	.	-	0	Parent=FBgn0039208.1.mrna1;Target=FBgn0039208.1 1996 2508 +
Chr2	stalkie_big_nohaplotig	CDS	109559952	109560416	.	-	0	Parent=FBgn0039208.1.mrna1;Target=FBgn0039208.1 1531 1995 +
Chr2	stalkie_big_nohaplotig	CDS	109561285	109561461	.	-	0	Parent=FBgn0039208.1.mrna1;Target=FBgn0039208.1 1354 1530 +
Chr2	stalkie_big_nohaplotig	CDS	109561612	109561660	.	-	1	Parent=FBgn0039208.1.mrna1;Target=FBgn0039208.1 1305 1353 +
Chr2	stalkie_big_nohaplotig	CDS	109568819	109568904	.	-	0	Parent=FBgn0039208.1.mrna1;Target=FBgn0039208.1 1219 1304 +
Chr2	stalkie_big_nohaplotig	CDS	109569241	109569411	.	-	0	Parent=FBgn0039208.1.mrna1;Target=FBgn0039208.1 1048 1218 +
Chr2	stalkie_big_nohaplotig	CDS	109569483	109570034	.	-	0	Parent=FBgn0039208.1.mrna1;Target=FBgn0039208.1 496 1047 +
Chr2	stalkie_big_nohaplotig	CDS	109570104	109570145	.	-	0	Parent=FBgn0039208.1.mrna1;Target=FBgn0039208.1 454 495 +
Chr2	stalkie_big_nohaplotig	CDS	109574578	109575010	.	-	1	Parent=FBgn0039208.1.mrna1;Target=FBgn0039208.1 21 453 +
Chr2	stalkie_big_nohaplotig	CDS	109578694	109578713	.	-	0	Parent=FBgn0039208.1.mrna1;Target=FBgn0039208.1 1 20 +
Chr2	gffcl	locus	109582290	109582695	.	+	.	ID=RLOC_00020409;geneIDs=comp135892_c0_seq1.path1;transcripts=comp135892_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109582290	109582695	.	+	.	ID=comp135892_c0_seq1.mrna1;geneID=comp135892_c0_seq1.path1;Name=comp135892_c0_seq1;Dir=indeterminatecoverage=83.9;identity=99.3;matches=403;mismatches=3;indels=0;unknowns=0;Target=comp135892_c0_seq1 423 18 .;CDS_Target=comp135892_c0_seq1 59 18 .;locus=RLOC_00020409
Chr2	stalkie_big_nohaplotig	exon	109582290	109582695	99	+	.	Parent=comp135892_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	109582290	109582331	.	+	0	Parent=comp135892_c0_seq1.mrna1
Chr2	gffcl	locus	109600554	109601531	.	-	.	ID=RLOC_00020410;geneIDs=ORF1865.path1;transcripts=ORF1865.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109600554	109601531	.	-	.	ID=ORF1865.mrna1;geneID=ORF1865.path1;Name=ORF1865;Dir=indeterminatecoverage=100.0;identity=99.6;matches=974;mismatches=4;indels=0;unknowns=0;Target=ORF1865 978 1 .;locus=RLOC_00020410
Chr2	stalkie_big_nohaplotig	exon	109600554	109601531	99	-	.	Parent=ORF1865.mrna1
Chr2	stalkie_big_nohaplotig	CDS	109600554	109601531	.	-	0	Parent=ORF1865.mrna1
Chr2	gffcl	locus	109619634	109620900	.	+	.	ID=RLOC_00020411;geneIDs=FBgn0037956.1.path1;transcripts=FBgn0037956.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109619634	109620900	.	+	.	ID=FBgn0037956.1.mrna1;geneID=FBgn0037956.1.path1;Name=FBgn0037956.1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=1267;mismatches=0;indels=0;unknowns=0;Target=FBgn0037956.1 1269 3 .;CDS_Target=FBgn0037956.1 1269 4 .;locus=RLOC_00020411
Chr2	stalkie_big_nohaplotig	exon	109619634	109620900	100	+	.	Parent=FBgn0037956.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	109619635	109620900	.	+	0	Parent=FBgn0037956.1.mrna1
Chr2	gffcl	locus	109665347	109665820	.	-	.	ID=RLOC_00020414;geneIDs=comp145467_c0_seq1.path1;transcripts=comp145467_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109665347	109665820	.	-	.	ID=comp145467_c0_seq1.mrna1;geneID=comp145467_c0_seq1.path1;Name=comp145467_c0_seq1;Dir=indeterminatecoverage=98.3;identity=98.3;matches=466;mismatches=7;indels=1;unknowns=0;Target=comp145467_c0_seq1 481 9 .;CDS_Target=comp145467_c0_seq1 25 11 .;locus=RLOC_00020414
Chr2	stalkie_big_nohaplotig	exon	109665347	109665820	98	-	.	Parent=comp145467_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	109665803	109665818	.	-	0	Parent=comp145467_c0_seq1.mrna1
Chr2	gffcl	locus	109681545	109682775	.	+	.	ID=RLOC_00020415;geneIDs=ORF1575.path1;transcripts=ORF1575.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109681545	109682775	.	+	.	ID=ORF1575.mrna1;geneID=ORF1575.path1;Name=ORF1575;Dir=sensecoverage=100.0;identity=100.0;matches=1056;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020415
Chr2	stalkie_big_nohaplotig	exon	109681545	109681559	100	+	.	Parent=ORF1575.mrna1;Target=ORF1575 1 15 +
Chr2	stalkie_big_nohaplotig	exon	109681623	109681808	100	+	.	Parent=ORF1575.mrna1;Target=ORF1575 16 201 +
Chr2	stalkie_big_nohaplotig	exon	109681869	109682568	100	+	.	Parent=ORF1575.mrna1;Target=ORF1575 202 901 +
Chr2	stalkie_big_nohaplotig	exon	109682621	109682775	100	+	.	Parent=ORF1575.mrna1;Target=ORF1575 902 1056 +
Chr2	stalkie_big_nohaplotig	CDS	109681545	109681559	.	+	0	Parent=ORF1575.mrna1;Target=ORF1575 1 15 +
Chr2	stalkie_big_nohaplotig	CDS	109681623	109681808	.	+	0	Parent=ORF1575.mrna1;Target=ORF1575 16 201 +
Chr2	stalkie_big_nohaplotig	CDS	109681869	109682568	.	+	0	Parent=ORF1575.mrna1;Target=ORF1575 202 901 +
Chr2	stalkie_big_nohaplotig	CDS	109682621	109682775	.	+	2	Parent=ORF1575.mrna1;Target=ORF1575 902 1056 +
Chr2	gffcl	locus	109801856	109803142	.	+	.	ID=RLOC_00020416;geneIDs=FBgn0037956.2.path1;transcripts=FBgn0037956.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109801856	109803142	.	+	.	ID=FBgn0037956.2.mrna1;geneID=FBgn0037956.2.path1;Name=FBgn0037956.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1287;mismatches=0;indels=0;unknowns=0;Target=FBgn0037956.2 1287 1 .;locus=RLOC_00020416
Chr2	stalkie_big_nohaplotig	exon	109801856	109803142	100	+	.	Parent=FBgn0037956.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	109801856	109803142	.	+	0	Parent=FBgn0037956.2.mrna1
Chr2	gffcl	locus	109803698	109804792	.	+	.	ID=RLOC_00020417;geneIDs=comp158918_c0_seq1.path1;transcripts=comp158918_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109803698	109804792	.	+	.	ID=comp158918_c0_seq1.mrna1;geneID=comp158918_c0_seq1.path1;Name=comp158918_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=1066;mismatches=26;indels=3;unknowns=0;Target=comp158918_c0_seq1 1092 1 .;CDS_Target=comp158918_c0_seq1 754 629 .;locus=RLOC_00020417
Chr2	stalkie_big_nohaplotig	exon	109803698	109804792	97	+	.	Parent=comp158918_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	109804329	109804454	.	+	0	Parent=comp158918_c0_seq1.mrna1
Chr2	gffcl	locus	109804892	109806652	.	+	.	ID=RLOC_00020418;geneIDs=comp160986_c0_seq1.path1;transcripts=comp160986_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109804892	109806652	.	+	.	ID=comp160986_c0_seq1.mrna1;geneID=comp160986_c0_seq1.path1;Name=comp160986_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.1;matches=1732;mismatches=29;indels=41;unknowns=0;Target=comp160986_c0_seq1 1802 1 .;CDS_Target=comp160986_c0_seq1 294 22 .;locus=RLOC_00020418
Chr2	stalkie_big_nohaplotig	exon	109804892	109806652	96	+	.	Parent=comp160986_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	109804913	109805185	.	+	0	Parent=comp160986_c0_seq1.mrna1
Chr2	gffcl	locus	109808509	109812330	.	+	.	ID=RLOC_00020419;geneIDs=FBgn0037955.1.path1,comp148685_c0_seq1.path1;transcripts=comp148685_c0_seq1.mrna1,FBgn0037955.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109808509	109809320	.	+	.	ID=comp148685_c0_seq1.mrna1;geneID=comp148685_c0_seq1.path1;Name=comp148685_c0_seq1;Dir=antisensecoverage=100.0;identity=99.2;matches=249;mismatches=2;indels=0;unknowns=0;Target=comp148685_c0_seq1 3 56 .;locus=RLOC_00020419
Chr2	stalkie_big_nohaplotig	exon	109808509	109808703	100	+	.	Parent=comp148685_c0_seq1.mrna1;Target=comp148685_c0_seq1 57 251 -
Chr2	stalkie_big_nohaplotig	exon	109809265	109809320	96	+	.	Parent=comp148685_c0_seq1.mrna1;Target=comp148685_c0_seq1 1 56 -
Chr2	stalkie_big_nohaplotig	CDS	109809265	109809318	.	+	0	Parent=comp148685_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109809265	109812330	.	+	.	ID=FBgn0037955.1.mrna1;geneID=FBgn0037955.1.path1;Name=FBgn0037955.1;Dir=sensecoverage=99.6;identity=100.0;matches=1347;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020419
Chr2	stalkie_big_nohaplotig	exon	109809265	109809410	100	+	.	Parent=FBgn0037955.1.mrna1;Target=FBgn0037955.1 7 152 +
Chr2	stalkie_big_nohaplotig	exon	109809476	109809626	100	+	.	Parent=FBgn0037955.1.mrna1;Target=FBgn0037955.1 153 303 +
Chr2	stalkie_big_nohaplotig	exon	109811222	109812056	100	+	.	Parent=FBgn0037955.1.mrna1;Target=FBgn0037955.1 304 1138 +
Chr2	stalkie_big_nohaplotig	exon	109812116	109812330	100	+	.	Parent=FBgn0037955.1.mrna1;Target=FBgn0037955.1 1139 1353 +
Chr2	stalkie_big_nohaplotig	CDS	109809265	109809410	.	+	0	Parent=FBgn0037955.1.mrna1;Target=FBgn0037955.1 7 152 +
Chr2	stalkie_big_nohaplotig	CDS	109809476	109809626	.	+	1	Parent=FBgn0037955.1.mrna1;Target=FBgn0037955.1 153 303 +
Chr2	stalkie_big_nohaplotig	CDS	109811222	109812056	.	+	0	Parent=FBgn0037955.1.mrna1;Target=FBgn0037955.1 304 1138 +
Chr2	stalkie_big_nohaplotig	CDS	109812116	109812330	.	+	2	Parent=FBgn0037955.1.mrna1;Target=FBgn0037955.1 1139 1353 +
Chr2	gffcl	locus	109812754	109813292	.	-	.	ID=RLOC_00020420;geneIDs=FBgn0019624.1.path1;transcripts=FBgn0019624.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109812754	109813292	.	-	.	ID=FBgn0019624.1.mrna1;geneID=FBgn0019624.1.path1;Name=FBgn0019624.1;Dir=sensecoverage=100.0;identity=100.0;matches=471;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020420
Chr2	stalkie_big_nohaplotig	exon	109812754	109813207	100	-	.	Parent=FBgn0019624.1.mrna1;Target=FBgn0019624.1 18 471 +
Chr2	stalkie_big_nohaplotig	exon	109813276	109813292	100	-	.	Parent=FBgn0019624.1.mrna1;Target=FBgn0019624.1 1 17 +
Chr2	stalkie_big_nohaplotig	CDS	109812754	109813207	.	-	1	Parent=FBgn0019624.1.mrna1;Target=FBgn0019624.1 18 471 +
Chr2	stalkie_big_nohaplotig	CDS	109813276	109813292	.	-	0	Parent=FBgn0019624.1.mrna1;Target=FBgn0019624.1 1 17 +
Chr2	gffcl	locus	109815339	109818229	.	+	.	ID=RLOC_00020421;geneIDs=FBgn0037728.1.path1;transcripts=FBgn0037728.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109815339	109818229	.	+	.	ID=FBgn0037728.1.mrna1;geneID=FBgn0037728.1.path1;Name=FBgn0037728.1;Dir=sensecoverage=100.0;identity=100.0;matches=558;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020421
Chr2	stalkie_big_nohaplotig	exon	109815339	109815370	100	+	.	Parent=FBgn0037728.1.mrna1;Target=FBgn0037728.1 1 32 +
Chr2	stalkie_big_nohaplotig	exon	109817365	109817451	100	+	.	Parent=FBgn0037728.1.mrna1;Target=FBgn0037728.1 33 119 +
Chr2	stalkie_big_nohaplotig	exon	109817522	109817672	100	+	.	Parent=FBgn0037728.1.mrna1;Target=FBgn0037728.1 120 270 +
Chr2	stalkie_big_nohaplotig	exon	109817942	109818229	100	+	.	Parent=FBgn0037728.1.mrna1;Target=FBgn0037728.1 271 558 +
Chr2	stalkie_big_nohaplotig	CDS	109815339	109815370	.	+	0	Parent=FBgn0037728.1.mrna1;Target=FBgn0037728.1 1 32 +
Chr2	stalkie_big_nohaplotig	CDS	109817365	109817451	.	+	1	Parent=FBgn0037728.1.mrna1;Target=FBgn0037728.1 33 119 +
Chr2	stalkie_big_nohaplotig	CDS	109817522	109817672	.	+	1	Parent=FBgn0037728.1.mrna1;Target=FBgn0037728.1 120 270 +
Chr2	stalkie_big_nohaplotig	CDS	109817942	109818229	.	+	0	Parent=FBgn0037728.1.mrna1;Target=FBgn0037728.1 271 558 +
Chr2	gffcl	locus	109826091	109833968	.	-	.	ID=RLOC_00020423;geneIDs=FBgn0037730.1.path1;transcripts=FBgn0037730.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109826091	109833968	.	-	.	ID=FBgn0037730.1.mrna1;geneID=FBgn0037730.1.path1;Name=FBgn0037730.1;Dir=sensecoverage=100.0;identity=100.0;matches=1752;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020423
Chr2	stalkie_big_nohaplotig	exon	109826091	109826339	100	-	.	Parent=FBgn0037730.1.mrna1;Target=FBgn0037730.1 1504 1752 +
Chr2	stalkie_big_nohaplotig	exon	109826401	109826508	100	-	.	Parent=FBgn0037730.1.mrna1;Target=FBgn0037730.1 1396 1503 +
Chr2	stalkie_big_nohaplotig	exon	109827648	109827758	100	-	.	Parent=FBgn0037730.1.mrna1;Target=FBgn0037730.1 1285 1395 +
Chr2	stalkie_big_nohaplotig	exon	109827811	109827990	100	-	.	Parent=FBgn0037730.1.mrna1;Target=FBgn0037730.1 1105 1284 +
Chr2	stalkie_big_nohaplotig	exon	109828055	109828180	100	-	.	Parent=FBgn0037730.1.mrna1;Target=FBgn0037730.1 979 1104 +
Chr2	stalkie_big_nohaplotig	exon	109828985	109829190	100	-	.	Parent=FBgn0037730.1.mrna1;Target=FBgn0037730.1 773 978 +
Chr2	stalkie_big_nohaplotig	exon	109829263	109829537	100	-	.	Parent=FBgn0037730.1.mrna1;Target=FBgn0037730.1 498 772 +
Chr2	stalkie_big_nohaplotig	exon	109831039	109831267	100	-	.	Parent=FBgn0037730.1.mrna1;Target=FBgn0037730.1 269 497 +
Chr2	stalkie_big_nohaplotig	exon	109831537	109831746	100	-	.	Parent=FBgn0037730.1.mrna1;Target=FBgn0037730.1 59 268 +
Chr2	stalkie_big_nohaplotig	exon	109833911	109833968	100	-	.	Parent=FBgn0037730.1.mrna1;Target=FBgn0037730.1 1 58 +
Chr2	stalkie_big_nohaplotig	CDS	109826091	109826339	.	-	0	Parent=FBgn0037730.1.mrna1;Target=FBgn0037730.1 1504 1752 +
Chr2	stalkie_big_nohaplotig	CDS	109826401	109826508	.	-	0	Parent=FBgn0037730.1.mrna1;Target=FBgn0037730.1 1396 1503 +
Chr2	stalkie_big_nohaplotig	CDS	109827648	109827758	.	-	0	Parent=FBgn0037730.1.mrna1;Target=FBgn0037730.1 1285 1395 +
Chr2	stalkie_big_nohaplotig	CDS	109827811	109827990	.	-	0	Parent=FBgn0037730.1.mrna1;Target=FBgn0037730.1 1105 1284 +
Chr2	stalkie_big_nohaplotig	CDS	109828055	109828180	.	-	0	Parent=FBgn0037730.1.mrna1;Target=FBgn0037730.1 979 1104 +
Chr2	stalkie_big_nohaplotig	CDS	109828985	109829190	.	-	2	Parent=FBgn0037730.1.mrna1;Target=FBgn0037730.1 773 978 +
Chr2	stalkie_big_nohaplotig	CDS	109829263	109829537	.	-	1	Parent=FBgn0037730.1.mrna1;Target=FBgn0037730.1 498 772 +
Chr2	stalkie_big_nohaplotig	CDS	109831039	109831267	.	-	2	Parent=FBgn0037730.1.mrna1;Target=FBgn0037730.1 269 497 +
Chr2	stalkie_big_nohaplotig	CDS	109831537	109831746	.	-	2	Parent=FBgn0037730.1.mrna1;Target=FBgn0037730.1 59 268 +
Chr2	stalkie_big_nohaplotig	CDS	109833911	109833968	.	-	0	Parent=FBgn0037730.1.mrna1;Target=FBgn0037730.1 1 58 +
Chr2	gffcl	locus	109835933	109836414	.	-	.	ID=RLOC_00020424;geneIDs=comp146996_c0_seq1.path1;transcripts=comp146996_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109835933	109836414	.	-	.	ID=comp146996_c0_seq1.mrna1;geneID=comp146996_c0_seq1.path1;Name=comp146996_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=390;mismatches=0;indels=8;unknowns=0;Target=comp146996_c0_seq1 125 60 .;locus=RLOC_00020424
Chr2	stalkie_big_nohaplotig	exon	109835933	109835964	100	-	.	Parent=comp146996_c0_seq1.mrna1;Target=comp146996_c0_seq1 422 391 .
Chr2	stalkie_big_nohaplotig	exon	109836057	109836414	97	-	.	Parent=comp146996_c0_seq1.mrna1;Target=comp146996_c0_seq1 366 1 .
Chr2	stalkie_big_nohaplotig	CDS	109836290	109836355	.	-	0	Parent=comp146996_c0_seq1.mrna1
Chr2	gffcl	locus	109836781	109837517	.	-	.	ID=RLOC_00020425;geneIDs=FBgn0069242.1.path1;transcripts=FBgn0069242.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109836781	109837517	.	-	.	ID=FBgn0069242.1.mrna1;geneID=FBgn0069242.1.path1;Name=FBgn0069242.1;Dir=sensecoverage=100.0;identity=100.0;matches=672;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020425
Chr2	stalkie_big_nohaplotig	exon	109836781	109837295	100	-	.	Parent=FBgn0069242.1.mrna1;Target=FBgn0069242.1 158 672 +
Chr2	stalkie_big_nohaplotig	exon	109837361	109837517	100	-	.	Parent=FBgn0069242.1.mrna1;Target=FBgn0069242.1 1 157 +
Chr2	stalkie_big_nohaplotig	CDS	109836781	109837295	.	-	2	Parent=FBgn0069242.1.mrna1;Target=FBgn0069242.1 158 672 +
Chr2	stalkie_big_nohaplotig	CDS	109837361	109837517	.	-	0	Parent=FBgn0069242.1.mrna1;Target=FBgn0069242.1 1 157 +
Chr2	gffcl	locus	109837925	109838907	.	+	.	ID=RLOC_00020426;geneIDs=FBgn0038868.1.path1;transcripts=FBgn0038868.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109837925	109838907	.	+	.	ID=FBgn0038868.1.mrna1;geneID=FBgn0038868.1.path1;Name=FBgn0038868.1;Dir=sensecoverage=100.0;identity=99.8;matches=925;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020426
Chr2	stalkie_big_nohaplotig	exon	109837925	109838072	100	+	.	Parent=FBgn0038868.1.mrna1;Target=FBgn0038868.1 1 148 +
Chr2	stalkie_big_nohaplotig	exon	109838129	109838907	99	+	.	Parent=FBgn0038868.1.mrna1;Target=FBgn0038868.1 149 927 +
Chr2	stalkie_big_nohaplotig	CDS	109837925	109838072	.	+	0	Parent=FBgn0038868.1.mrna1;Target=FBgn0038868.1 1 148 +
Chr2	stalkie_big_nohaplotig	CDS	109838129	109838907	.	+	2	Parent=FBgn0038868.1.mrna1;Target=FBgn0038868.1 149 927 +
Chr2	gffcl	locus	109839084	109840564	.	-	.	ID=RLOC_00020427;geneIDs=FBgn0038869.1.path1;transcripts=FBgn0038869.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109839084	109840564	.	-	.	ID=FBgn0038869.1.mrna1;geneID=FBgn0038869.1.path1;Name=FBgn0038869.1;Dir=sensecoverage=100.0;identity=99.9;matches=1190;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020427
Chr2	stalkie_big_nohaplotig	exon	109839084	109839218	100	-	.	Parent=FBgn0038869.1.mrna1;Target=FBgn0038869.1 1057 1191 +
Chr2	stalkie_big_nohaplotig	exon	109839273	109839487	100	-	.	Parent=FBgn0038869.1.mrna1;Target=FBgn0038869.1 842 1056 +
Chr2	stalkie_big_nohaplotig	exon	109839550	109839727	99	-	.	Parent=FBgn0038869.1.mrna1;Target=FBgn0038869.1 664 841 +
Chr2	stalkie_big_nohaplotig	exon	109839779	109840016	100	-	.	Parent=FBgn0038869.1.mrna1;Target=FBgn0038869.1 426 663 +
Chr2	stalkie_big_nohaplotig	exon	109840076	109840452	100	-	.	Parent=FBgn0038869.1.mrna1;Target=FBgn0038869.1 49 425 +
Chr2	stalkie_big_nohaplotig	exon	109840517	109840564	100	-	.	Parent=FBgn0038869.1.mrna1;Target=FBgn0038869.1 1 48 +
Chr2	stalkie_big_nohaplotig	CDS	109839084	109839218	.	-	0	Parent=FBgn0038869.1.mrna1;Target=FBgn0038869.1 1057 1191 +
Chr2	stalkie_big_nohaplotig	CDS	109839273	109839487	.	-	2	Parent=FBgn0038869.1.mrna1;Target=FBgn0038869.1 842 1056 +
Chr2	stalkie_big_nohaplotig	CDS	109839550	109839727	.	-	0	Parent=FBgn0038869.1.mrna1;Target=FBgn0038869.1 664 841 +
Chr2	stalkie_big_nohaplotig	CDS	109839779	109840016	.	-	1	Parent=FBgn0038869.1.mrna1;Target=FBgn0038869.1 426 663 +
Chr2	stalkie_big_nohaplotig	CDS	109840076	109840452	.	-	0	Parent=FBgn0038869.1.mrna1;Target=FBgn0038869.1 49 425 +
Chr2	stalkie_big_nohaplotig	CDS	109840517	109840564	.	-	0	Parent=FBgn0038869.1.mrna1;Target=FBgn0038869.1 1 48 +
Chr2	gffcl	locus	109843005	109953802	.	-	.	ID=RLOC_00020428;geneIDs=FBgn0264357.1.path1;transcripts=FBgn0264357.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109843005	109953802	.	-	.	ID=FBgn0264357.1.mrna1;geneID=FBgn0264357.1.path1;Name=FBgn0264357.1;Dir=sensecoverage=100.0;identity=100.0;matches=4073;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020428
Chr2	stalkie_big_nohaplotig	exon	109843005	109843790	100	-	.	Parent=FBgn0264357.1.mrna1;Target=FBgn0264357.1 3289 4074 +
Chr2	stalkie_big_nohaplotig	exon	109843849	109844052	100	-	.	Parent=FBgn0264357.1.mrna1;Target=FBgn0264357.1 3085 3288 +
Chr2	stalkie_big_nohaplotig	exon	109844273	109844451	100	-	.	Parent=FBgn0264357.1.mrna1;Target=FBgn0264357.1 2906 3084 +
Chr2	stalkie_big_nohaplotig	exon	109844655	109844945	100	-	.	Parent=FBgn0264357.1.mrna1;Target=FBgn0264357.1 2615 2905 +
Chr2	stalkie_big_nohaplotig	exon	109858660	109858708	100	-	.	Parent=FBgn0264357.1.mrna1;Target=FBgn0264357.1 2566 2614 +
Chr2	stalkie_big_nohaplotig	exon	109868029	109868162	100	-	.	Parent=FBgn0264357.1.mrna1;Target=FBgn0264357.1 2432 2565 +
Chr2	stalkie_big_nohaplotig	exon	109915469	109915505	100	-	.	Parent=FBgn0264357.1.mrna1;Target=FBgn0264357.1 2395 2431 +
Chr2	stalkie_big_nohaplotig	exon	109937975	109938094	100	-	.	Parent=FBgn0264357.1.mrna1;Target=FBgn0264357.1 2275 2394 +
Chr2	stalkie_big_nohaplotig	exon	109938654	109939230	100	-	.	Parent=FBgn0264357.1.mrna1;Target=FBgn0264357.1 1698 2274 +
Chr2	stalkie_big_nohaplotig	exon	109940875	109940978	100	-	.	Parent=FBgn0264357.1.mrna1;Target=FBgn0264357.1 1594 1697 +
Chr2	stalkie_big_nohaplotig	exon	109952210	109953802	99	-	.	Parent=FBgn0264357.1.mrna1;Target=FBgn0264357.1 1 1593 +
Chr2	stalkie_big_nohaplotig	CDS	109843005	109843790	.	-	0	Parent=FBgn0264357.1.mrna1;Target=FBgn0264357.1 3289 4074 +
Chr2	stalkie_big_nohaplotig	CDS	109843849	109844052	.	-	0	Parent=FBgn0264357.1.mrna1;Target=FBgn0264357.1 3085 3288 +
Chr2	stalkie_big_nohaplotig	CDS	109844273	109844451	.	-	2	Parent=FBgn0264357.1.mrna1;Target=FBgn0264357.1 2906 3084 +
Chr2	stalkie_big_nohaplotig	CDS	109844655	109844945	.	-	2	Parent=FBgn0264357.1.mrna1;Target=FBgn0264357.1 2615 2905 +
Chr2	stalkie_big_nohaplotig	CDS	109858660	109858708	.	-	0	Parent=FBgn0264357.1.mrna1;Target=FBgn0264357.1 2566 2614 +
Chr2	stalkie_big_nohaplotig	CDS	109868029	109868162	.	-	2	Parent=FBgn0264357.1.mrna1;Target=FBgn0264357.1 2432 2565 +
Chr2	stalkie_big_nohaplotig	CDS	109915469	109915505	.	-	0	Parent=FBgn0264357.1.mrna1;Target=FBgn0264357.1 2395 2431 +
Chr2	stalkie_big_nohaplotig	CDS	109937975	109938094	.	-	0	Parent=FBgn0264357.1.mrna1;Target=FBgn0264357.1 2275 2394 +
Chr2	stalkie_big_nohaplotig	CDS	109938654	109939230	.	-	1	Parent=FBgn0264357.1.mrna1;Target=FBgn0264357.1 1698 2274 +
Chr2	stalkie_big_nohaplotig	CDS	109940875	109940978	.	-	0	Parent=FBgn0264357.1.mrna1;Target=FBgn0264357.1 1594 1697 +
Chr2	stalkie_big_nohaplotig	CDS	109952210	109953802	.	-	0	Parent=FBgn0264357.1.mrna1;Target=FBgn0264357.1 1 1593 +
Chr2	gffcl	locus	109858686	109865326	.	+	.	ID=RLOC_00020429;geneIDs=comp146178_c0_seq1.path1;transcripts=comp146178_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109858686	109865326	.	+	.	ID=comp146178_c0_seq1.mrna1;geneID=comp146178_c0_seq1.path1;Name=comp146178_c0_seq1;Dir=antisensecoverage=98.9;identity=100.0;matches=1012;mismatches=0;indels=0;unknowns=0;Target=comp146178_c0_seq1 397 564 .;locus=RLOC_00020429
Chr2	stalkie_big_nohaplotig	exon	109858686	109858708	100	+	.	Parent=comp146178_c0_seq1.mrna1;Target=comp146178_c0_seq1 1001 1023 -
Chr2	stalkie_big_nohaplotig	exon	109864268	109865119	100	+	.	Parent=comp146178_c0_seq1.mrna1;Target=comp146178_c0_seq1 149 1000 -
Chr2	stalkie_big_nohaplotig	exon	109865190	109865326	100	+	.	Parent=comp146178_c0_seq1.mrna1;Target=comp146178_c0_seq1 12 148 -
Chr2	stalkie_big_nohaplotig	CDS	109864704	109864871	.	+	0	Parent=comp146178_c0_seq1.mrna1
Chr2	gffcl	locus	109870836	109904556	.	-	.	ID=RLOC_00020430;geneIDs=comp150980_c0_seq1.path1;transcripts=comp150980_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109870836	109904556	.	-	.	ID=comp150980_c0_seq1.mrna1;geneID=comp150980_c0_seq1.path1;Name=comp150980_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=822;mismatches=2;indels=2;unknowns=0;locus=RLOC_00020430
Chr2	stalkie_big_nohaplotig	exon	109870836	109871477	99	-	.	Parent=comp150980_c0_seq1.mrna1;Target=comp150980_c0_seq1 1 640 -
Chr2	stalkie_big_nohaplotig	exon	109904373	109904556	100	-	.	Parent=comp150980_c0_seq1.mrna1;Target=comp150980_c0_seq1 641 824 -
Chr2	stalkie_big_nohaplotig	CDS	109871437	109871477	.	-	2	Parent=comp150980_c0_seq1.mrna1;Target=comp150980_c0_seq1 600 640 .
Chr2	stalkie_big_nohaplotig	CDS	109904373	109904409	.	-	0	Parent=comp150980_c0_seq1.mrna1;Target=comp150980_c0_seq1 641 677 .
Chr2	gffcl	locus	109919724	109920865	.	-	.	ID=RLOC_00020431;geneIDs=comp156760_c0_seq1.path1;transcripts=comp156760_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109919724	109920865	.	-	.	ID=comp156760_c0_seq1.mrna1;geneID=comp156760_c0_seq1.path1;Name=comp156760_c0_seq1;Dir=indeterminatecoverage=98.7;identity=99.4;matches=1135;mismatches=5;indels=2;unknowns=0;Target=comp156760_c0_seq1 1140 1 .;CDS_Target=comp156760_c0_seq1 199 2 .;locus=RLOC_00020431
Chr2	stalkie_big_nohaplotig	exon	109919724	109920865	99	-	.	Parent=comp156760_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	109920665	109920864	.	-	0	Parent=comp156760_c0_seq1.mrna1
Chr2	gffcl	locus	109967503	109973180	.	+	.	ID=RLOC_00020432;geneIDs=FBgn0260004.1.path1;transcripts=FBgn0260004.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109967503	109973180	.	+	.	ID=FBgn0260004.1.mrna1;geneID=FBgn0260004.1.path1;Name=FBgn0260004.1;Dir=sensecoverage=100.0;identity=99.8;matches=1613;mismatches=4;indels=0;unknowns=0;locus=RLOC_00020432
Chr2	stalkie_big_nohaplotig	exon	109967503	109967655	100	+	.	Parent=FBgn0260004.1.mrna1;Target=FBgn0260004.1 1 153 +
Chr2	stalkie_big_nohaplotig	exon	109969367	109969524	99	+	.	Parent=FBgn0260004.1.mrna1;Target=FBgn0260004.1 154 311 +
Chr2	stalkie_big_nohaplotig	exon	109969648	109969795	99	+	.	Parent=FBgn0260004.1.mrna1;Target=FBgn0260004.1 312 459 +
Chr2	stalkie_big_nohaplotig	exon	109970552	109970806	99	+	.	Parent=FBgn0260004.1.mrna1;Target=FBgn0260004.1 460 714 +
Chr2	stalkie_big_nohaplotig	exon	109970884	109971180	100	+	.	Parent=FBgn0260004.1.mrna1;Target=FBgn0260004.1 715 1011 +
Chr2	stalkie_big_nohaplotig	exon	109971443	109971652	99	+	.	Parent=FBgn0260004.1.mrna1;Target=FBgn0260004.1 1012 1221 +
Chr2	stalkie_big_nohaplotig	exon	109972723	109972901	100	+	.	Parent=FBgn0260004.1.mrna1;Target=FBgn0260004.1 1222 1400 +
Chr2	stalkie_big_nohaplotig	exon	109972964	109973180	100	+	.	Parent=FBgn0260004.1.mrna1;Target=FBgn0260004.1 1401 1617 +
Chr2	stalkie_big_nohaplotig	CDS	109967503	109967655	.	+	0	Parent=FBgn0260004.1.mrna1;Target=FBgn0260004.1 1 153 +
Chr2	stalkie_big_nohaplotig	CDS	109969367	109969524	.	+	0	Parent=FBgn0260004.1.mrna1;Target=FBgn0260004.1 154 311 +
Chr2	stalkie_big_nohaplotig	CDS	109969648	109969795	.	+	1	Parent=FBgn0260004.1.mrna1;Target=FBgn0260004.1 312 459 +
Chr2	stalkie_big_nohaplotig	CDS	109970552	109970806	.	+	0	Parent=FBgn0260004.1.mrna1;Target=FBgn0260004.1 460 714 +
Chr2	stalkie_big_nohaplotig	CDS	109970884	109971180	.	+	0	Parent=FBgn0260004.1.mrna1;Target=FBgn0260004.1 715 1011 +
Chr2	stalkie_big_nohaplotig	CDS	109971443	109971652	.	+	0	Parent=FBgn0260004.1.mrna1;Target=FBgn0260004.1 1012 1221 +
Chr2	stalkie_big_nohaplotig	CDS	109972723	109972901	.	+	0	Parent=FBgn0260004.1.mrna1;Target=FBgn0260004.1 1222 1400 +
Chr2	stalkie_big_nohaplotig	CDS	109972964	109973180	.	+	1	Parent=FBgn0260004.1.mrna1;Target=FBgn0260004.1 1401 1617 +
Chr2	gffcl	locus	109986943	109988685	.	+	.	ID=RLOC_00020433;geneIDs=FBgn0038865.1.path1;transcripts=FBgn0038865.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	109986943	109988685	.	+	.	ID=FBgn0038865.1.mrna1;geneID=FBgn0038865.1.path1;Name=FBgn0038865.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1739;mismatches=4;indels=0;unknowns=0;Target=FBgn0038865.1 1743 1 .;locus=RLOC_00020433
Chr2	stalkie_big_nohaplotig	exon	109986943	109988685	99	+	.	Parent=FBgn0038865.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	109986943	109988685	.	+	0	Parent=FBgn0038865.1.mrna1
Chr2	gffcl	locus	110023636	110024043	.	-	.	ID=RLOC_00020434;geneIDs=comp134685_c0_seq1.path1;transcripts=comp134685_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110023636	110024043	.	-	.	ID=comp134685_c0_seq1.mrna1;geneID=comp134685_c0_seq1.path1;Name=comp134685_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=408;mismatches=0;indels=0;unknowns=0;Target=comp134685_c0_seq1 408 1 .;CDS_Target=comp134685_c0_seq1 60 1 .;locus=RLOC_00020434
Chr2	stalkie_big_nohaplotig	exon	110023636	110024043	100	-	.	Parent=comp134685_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110023984	110024043	.	-	0	Parent=comp134685_c0_seq1.mrna1
Chr2	gffcl	locus	110024465	110025161	.	+	.	ID=RLOC_00020435;geneIDs=comp144704_c0_seq1.path1;transcripts=comp144704_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110024465	110025161	.	+	.	ID=comp144704_c0_seq1.mrna1;geneID=comp144704_c0_seq1.path1;Name=comp144704_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.9;matches=696;mismatches=1;indels=0;unknowns=0;Target=comp144704_c0_seq1 697 1 .;CDS_Target=comp144704_c0_seq1 184 2 .;locus=RLOC_00020435
Chr2	stalkie_big_nohaplotig	exon	110024465	110025161	99	+	.	Parent=comp144704_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110024466	110024648	.	+	0	Parent=comp144704_c0_seq1.mrna1
Chr2	gffcl	locus	110025510	110026673	.	-	.	ID=RLOC_00020436;geneIDs=FBgn0250820.1.path1;transcripts=FBgn0250820.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110025510	110026673	.	-	.	ID=FBgn0250820.1.mrna1;geneID=FBgn0250820.1.path1;Name=FBgn0250820.1;Dir=sensecoverage=100.0;identity=100.0;matches=1035;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020436
Chr2	stalkie_big_nohaplotig	exon	110025510	110025856	100	-	.	Parent=FBgn0250820.1.mrna1;Target=FBgn0250820.1 689 1035 +
Chr2	stalkie_big_nohaplotig	exon	110025918	110026379	100	-	.	Parent=FBgn0250820.1.mrna1;Target=FBgn0250820.1 227 688 +
Chr2	stalkie_big_nohaplotig	exon	110026448	110026673	100	-	.	Parent=FBgn0250820.1.mrna1;Target=FBgn0250820.1 1 226 +
Chr2	stalkie_big_nohaplotig	CDS	110025510	110025856	.	-	2	Parent=FBgn0250820.1.mrna1;Target=FBgn0250820.1 689 1035 +
Chr2	stalkie_big_nohaplotig	CDS	110025918	110026379	.	-	2	Parent=FBgn0250820.1.mrna1;Target=FBgn0250820.1 227 688 +
Chr2	stalkie_big_nohaplotig	CDS	110026448	110026673	.	-	0	Parent=FBgn0250820.1.mrna1;Target=FBgn0250820.1 1 226 +
Chr2	gffcl	locus	110035050	110043856	.	-	.	ID=RLOC_00020437;geneIDs=FBgn0037475.1.path1;transcripts=FBgn0037475.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110035050	110043856	.	-	.	ID=FBgn0037475.1.mrna1;geneID=FBgn0037475.1.path1;Name=FBgn0037475.1;Dir=sensecoverage=100.0;identity=99.9;matches=905;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020437
Chr2	stalkie_big_nohaplotig	exon	110035050	110035402	100	-	.	Parent=FBgn0037475.1.mrna1;Target=FBgn0037475.1 554 906 +
Chr2	stalkie_big_nohaplotig	exon	110041711	110042018	100	-	.	Parent=FBgn0037475.1.mrna1;Target=FBgn0037475.1 246 553 +
Chr2	stalkie_big_nohaplotig	exon	110043612	110043856	99	-	.	Parent=FBgn0037475.1.mrna1;Target=FBgn0037475.1 1 245 +
Chr2	stalkie_big_nohaplotig	CDS	110035050	110035402	.	-	2	Parent=FBgn0037475.1.mrna1;Target=FBgn0037475.1 554 906 +
Chr2	stalkie_big_nohaplotig	CDS	110041711	110042018	.	-	1	Parent=FBgn0037475.1.mrna1;Target=FBgn0037475.1 246 553 +
Chr2	stalkie_big_nohaplotig	CDS	110043612	110043856	.	-	0	Parent=FBgn0037475.1.mrna1;Target=FBgn0037475.1 1 245 +
Chr2	gffcl	locus	110041242	110086352	.	+	.	ID=RLOC_00020438;geneIDs=comp145302_c0_seq1.path1;transcripts=comp145302_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110041242	110086352	.	+	.	ID=comp145302_c0_seq1.mrna1;geneID=comp145302_c0_seq1.path1;Name=comp145302_c0_seq1;Dir=indeterminatecoverage=93.6;identity=99.7;matches=696;mismatches=2;indels=0;unknowns=0;Target=comp145302_c0_seq1 510 436 .;locus=RLOC_00020438
Chr2	stalkie_big_nohaplotig	exon	110041242	110041244	100	+	.	Parent=comp145302_c0_seq1.mrna1;Target=comp145302_c0_seq1 51 49 .
Chr2	stalkie_big_nohaplotig	exon	110048214	110048222	100	+	.	Parent=comp145302_c0_seq1.mrna1;Target=comp145302_c0_seq1 60 52 .
Chr2	stalkie_big_nohaplotig	exon	110049838	110049843	100	+	.	Parent=comp145302_c0_seq1.mrna1;Target=comp145302_c0_seq1 66 61 .
Chr2	stalkie_big_nohaplotig	exon	110063181	110063190	100	+	.	Parent=comp145302_c0_seq1.mrna1;Target=comp145302_c0_seq1 76 67 .
Chr2	stalkie_big_nohaplotig	exon	110085683	110086352	99	+	.	Parent=comp145302_c0_seq1.mrna1;Target=comp145302_c0_seq1 753 84 .
Chr2	stalkie_big_nohaplotig	CDS	110086035	110086109	.	+	0	Parent=comp145302_c0_seq1.mrna1
Chr2	gffcl	locus	110058518	110059517	.	-	.	ID=RLOC_00020439;geneIDs=comp151862_c0_seq1.path1;transcripts=comp151862_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110058518	110059517	.	-	.	ID=comp151862_c0_seq1.mrna1;geneID=comp151862_c0_seq1.path1;Name=comp151862_c0_seq1;Dir=indeterminatecoverage=96.8;identity=99.5;matches=995;mismatches=4;indels=1;unknowns=0;Target=comp151862_c0_seq1 999 1 .;CDS_Target=comp151862_c0_seq1 330 169 .;locus=RLOC_00020439
Chr2	stalkie_big_nohaplotig	exon	110058518	110059517	99	-	.	Parent=comp151862_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110059188	110059349	.	-	0	Parent=comp151862_c0_seq1.mrna1
Chr2	gffcl	locus	110060501	110067249	.	-	.	ID=RLOC_00020440;geneIDs=FBgn0051248.1.path1;transcripts=FBgn0051248.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110060501	110067249	.	-	.	ID=FBgn0051248.1.mrna1;geneID=FBgn0051248.1.path1;Name=FBgn0051248.1;Dir=sensecoverage=100.0;identity=99.7;matches=766;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020440
Chr2	stalkie_big_nohaplotig	exon	110060501	110060962	99	-	.	Parent=FBgn0051248.1.mrna1;Target=FBgn0051248.1 307 768 +
Chr2	stalkie_big_nohaplotig	exon	110061037	110061119	100	-	.	Parent=FBgn0051248.1.mrna1;Target=FBgn0051248.1 224 306 +
Chr2	stalkie_big_nohaplotig	exon	110061225	110061324	100	-	.	Parent=FBgn0051248.1.mrna1;Target=FBgn0051248.1 124 223 +
Chr2	stalkie_big_nohaplotig	exon	110067060	110067112	100	-	.	Parent=FBgn0051248.1.mrna1;Target=FBgn0051248.1 71 123 +
Chr2	stalkie_big_nohaplotig	exon	110067180	110067249	100	-	.	Parent=FBgn0051248.1.mrna1;Target=FBgn0051248.1 1 70 +
Chr2	stalkie_big_nohaplotig	CDS	110060501	110060962	.	-	0	Parent=FBgn0051248.1.mrna1;Target=FBgn0051248.1 307 768 +
Chr2	stalkie_big_nohaplotig	CDS	110061037	110061119	.	-	2	Parent=FBgn0051248.1.mrna1;Target=FBgn0051248.1 224 306 +
Chr2	stalkie_big_nohaplotig	CDS	110061225	110061324	.	-	0	Parent=FBgn0051248.1.mrna1;Target=FBgn0051248.1 124 223 +
Chr2	stalkie_big_nohaplotig	CDS	110067060	110067112	.	-	2	Parent=FBgn0051248.1.mrna1;Target=FBgn0051248.1 71 123 +
Chr2	stalkie_big_nohaplotig	CDS	110067180	110067249	.	-	0	Parent=FBgn0051248.1.mrna1;Target=FBgn0051248.1 1 70 +
Chr2	gffcl	locus	110069838	110073622	.	-	.	ID=RLOC_00020441;geneIDs=FBgn0051248.2.path1;transcripts=FBgn0051248.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110069838	110073622	.	-	.	ID=FBgn0051248.2.mrna1;geneID=FBgn0051248.2.path1;Name=FBgn0051248.2;Dir=sensecoverage=100.0;identity=100.0;matches=777;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020441
Chr2	stalkie_big_nohaplotig	exon	110069838	110070305	100	-	.	Parent=FBgn0051248.2.mrna1;Target=FBgn0051248.2 310 777 +
Chr2	stalkie_big_nohaplotig	exon	110070367	110070555	100	-	.	Parent=FBgn0051248.2.mrna1;Target=FBgn0051248.2 121 309 +
Chr2	stalkie_big_nohaplotig	exon	110072834	110072886	100	-	.	Parent=FBgn0051248.2.mrna1;Target=FBgn0051248.2 68 120 +
Chr2	stalkie_big_nohaplotig	exon	110073005	110073056	100	-	.	Parent=FBgn0051248.2.mrna1;Target=FBgn0051248.2 16 67 +
Chr2	stalkie_big_nohaplotig	exon	110073608	110073622	100	-	.	Parent=FBgn0051248.2.mrna1;Target=FBgn0051248.2 1 15 +
Chr2	stalkie_big_nohaplotig	CDS	110069838	110070305	.	-	0	Parent=FBgn0051248.2.mrna1;Target=FBgn0051248.2 310 777 +
Chr2	stalkie_big_nohaplotig	CDS	110070367	110070555	.	-	0	Parent=FBgn0051248.2.mrna1;Target=FBgn0051248.2 121 309 +
Chr2	stalkie_big_nohaplotig	CDS	110072834	110072886	.	-	2	Parent=FBgn0051248.2.mrna1;Target=FBgn0051248.2 68 120 +
Chr2	stalkie_big_nohaplotig	CDS	110073005	110073056	.	-	0	Parent=FBgn0051248.2.mrna1;Target=FBgn0051248.2 16 67 +
Chr2	stalkie_big_nohaplotig	CDS	110073608	110073622	.	-	0	Parent=FBgn0051248.2.mrna1;Target=FBgn0051248.2 1 15 +
Chr2	gffcl	locus	110072210	110072636	.	+	.	ID=RLOC_00020442;geneIDs=comp155212_c0_seq1.path1;transcripts=comp155212_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110072210	110072636	.	+	.	ID=comp155212_c0_seq1.mrna1;geneID=comp155212_c0_seq1.path1;Name=comp155212_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.7;matches=422;mismatches=5;indels=5;unknowns=0;Target=comp155212_c0_seq1 432 1 .;CDS_Target=comp155212_c0_seq1 41 3 .;locus=RLOC_00020442
Chr2	stalkie_big_nohaplotig	exon	110072210	110072636	97	+	.	Parent=comp155212_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110072212	110072245	.	+	0	Parent=comp155212_c0_seq1.mrna1
Chr2	gffcl	locus	110075881	110076992	.	+	.	ID=RLOC_00020443;geneIDs=FBgn0037473.1.path1;transcripts=FBgn0037473.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110075881	110076992	.	+	.	ID=FBgn0037473.1.mrna1;geneID=FBgn0037473.1.path1;Name=FBgn0037473.1;Dir=sensecoverage=100.0;identity=99.4;matches=1041;mismatches=4;indels=2;unknowns=0;Target=FBgn0037473.1 2 73 +;locus=RLOC_00020443
Chr2	stalkie_big_nohaplotig	exon	110075881	110076496	99	+	.	Parent=FBgn0037473.1.mrna1;Target=FBgn0037473.1 1 618 +
Chr2	stalkie_big_nohaplotig	exon	110076564	110076992	99	+	.	Parent=FBgn0037473.1.mrna1;Target=FBgn0037473.1 619 1047 +
Chr2	stalkie_big_nohaplotig	CDS	110075882	110075951	.	+	0	Parent=FBgn0037473.1.mrna1
Chr2	gffcl	locus	110079033	110079361	.	-	.	ID=RLOC_00020444;geneIDs=comp135330_c1_seq1.path1;transcripts=comp135330_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110079033	110079361	.	-	.	ID=comp135330_c1_seq1.mrna1;geneID=comp135330_c1_seq1.path1;Name=comp135330_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=329;mismatches=0;indels=0;unknowns=0;Target=comp135330_c1_seq1 329 1 .;CDS_Target=comp135330_c1_seq1 100 2 .;locus=RLOC_00020444
Chr2	stalkie_big_nohaplotig	exon	110079033	110079361	100	-	.	Parent=comp135330_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110079262	110079360	.	-	0	Parent=comp135330_c1_seq1.mrna1
Chr2	gffcl	locus	110079760	110081998	.	-	.	ID=RLOC_00020445;geneIDs=FBgn0037472.1.path1;transcripts=FBgn0037472.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110079760	110081998	.	-	.	ID=FBgn0037472.1.mrna1;geneID=FBgn0037472.1.path1;Name=FBgn0037472.1;Dir=sensecoverage=100.0;identity=100.0;matches=1098;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020445
Chr2	stalkie_big_nohaplotig	exon	110079760	110080236	100	-	.	Parent=FBgn0037472.1.mrna1;Target=FBgn0037472.1 622 1098 +
Chr2	stalkie_big_nohaplotig	exon	110080295	110080571	100	-	.	Parent=FBgn0037472.1.mrna1;Target=FBgn0037472.1 345 621 +
Chr2	stalkie_big_nohaplotig	exon	110081599	110081783	100	-	.	Parent=FBgn0037472.1.mrna1;Target=FBgn0037472.1 160 344 +
Chr2	stalkie_big_nohaplotig	exon	110081840	110081998	100	-	.	Parent=FBgn0037472.1.mrna1;Target=FBgn0037472.1 1 159 +
Chr2	stalkie_big_nohaplotig	CDS	110079760	110080236	.	-	0	Parent=FBgn0037472.1.mrna1;Target=FBgn0037472.1 622 1098 +
Chr2	stalkie_big_nohaplotig	CDS	110080295	110080571	.	-	1	Parent=FBgn0037472.1.mrna1;Target=FBgn0037472.1 345 621 +
Chr2	stalkie_big_nohaplotig	CDS	110081599	110081783	.	-	0	Parent=FBgn0037472.1.mrna1;Target=FBgn0037472.1 160 344 +
Chr2	stalkie_big_nohaplotig	CDS	110081840	110081998	.	-	0	Parent=FBgn0037472.1.mrna1;Target=FBgn0037472.1 1 159 +
Chr2	gffcl	locus	110084034	110084826	.	+	.	ID=RLOC_00020446;geneIDs=comp75022_c1_seq1.path1;transcripts=comp75022_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110084034	110084826	.	+	.	ID=comp75022_c1_seq1.mrna1;geneID=comp75022_c1_seq1.path1;Name=comp75022_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=793;mismatches=0;indels=0;unknowns=0;Target=comp75022_c1_seq1 793 1 .;CDS_Target=comp75022_c1_seq1 468 424 .;locus=RLOC_00020446
Chr2	stalkie_big_nohaplotig	exon	110084034	110084826	100	+	.	Parent=comp75022_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110084457	110084501	.	+	0	Parent=comp75022_c1_seq1.mrna1
Chr2	gffcl	locus	110086535	110092382	.	-	.	ID=RLOC_00020447;geneIDs=FBgn0261286.1.path1;transcripts=FBgn0261286.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110086535	110092382	.	-	.	ID=FBgn0261286.1.mrna1;geneID=FBgn0261286.1.path1;Name=FBgn0261286.1;Dir=sensecoverage=100.0;identity=99.7;matches=3612;mismatches=12;indels=0;unknowns=0;locus=RLOC_00020447
Chr2	stalkie_big_nohaplotig	exon	110086535	110086846	100	-	.	Parent=FBgn0261286.1.mrna1;Target=FBgn0261286.1 3313 3624 +
Chr2	stalkie_big_nohaplotig	exon	110086909	110087312	100	-	.	Parent=FBgn0261286.1.mrna1;Target=FBgn0261286.1 2909 3312 +
Chr2	stalkie_big_nohaplotig	exon	110087376	110087933	99	-	.	Parent=FBgn0261286.1.mrna1;Target=FBgn0261286.1 2351 2908 +
Chr2	stalkie_big_nohaplotig	exon	110087989	110088665	99	-	.	Parent=FBgn0261286.1.mrna1;Target=FBgn0261286.1 1674 2350 +
Chr2	stalkie_big_nohaplotig	exon	110090545	110090655	99	-	.	Parent=FBgn0261286.1.mrna1;Target=FBgn0261286.1 1563 1673 +
Chr2	stalkie_big_nohaplotig	exon	110090710	110090998	99	-	.	Parent=FBgn0261286.1.mrna1;Target=FBgn0261286.1 1274 1562 +
Chr2	stalkie_big_nohaplotig	exon	110091054	110092233	99	-	.	Parent=FBgn0261286.1.mrna1;Target=FBgn0261286.1 94 1273 +
Chr2	stalkie_big_nohaplotig	exon	110092290	110092382	97	-	.	Parent=FBgn0261286.1.mrna1;Target=FBgn0261286.1 1 93 +
Chr2	stalkie_big_nohaplotig	CDS	110086535	110086846	.	-	0	Parent=FBgn0261286.1.mrna1;Target=FBgn0261286.1 3313 3624 +
Chr2	stalkie_big_nohaplotig	CDS	110086909	110087312	.	-	2	Parent=FBgn0261286.1.mrna1;Target=FBgn0261286.1 2909 3312 +
Chr2	stalkie_big_nohaplotig	CDS	110087376	110087933	.	-	2	Parent=FBgn0261286.1.mrna1;Target=FBgn0261286.1 2351 2908 +
Chr2	stalkie_big_nohaplotig	CDS	110087989	110088665	.	-	1	Parent=FBgn0261286.1.mrna1;Target=FBgn0261286.1 1674 2350 +
Chr2	stalkie_big_nohaplotig	CDS	110090545	110090655	.	-	1	Parent=FBgn0261286.1.mrna1;Target=FBgn0261286.1 1563 1673 +
Chr2	stalkie_big_nohaplotig	CDS	110090710	110090998	.	-	2	Parent=FBgn0261286.1.mrna1;Target=FBgn0261286.1 1274 1562 +
Chr2	stalkie_big_nohaplotig	CDS	110091054	110092233	.	-	0	Parent=FBgn0261286.1.mrna1;Target=FBgn0261286.1 94 1273 +
Chr2	stalkie_big_nohaplotig	CDS	110092290	110092382	.	-	0	Parent=FBgn0261286.1.mrna1;Target=FBgn0261286.1 1 93 +
Chr2	stalkie_big_nohaplotig	mRNA	110094296	110096798	.	+	.	ID=comp144926_c0_seq1.mrna1;geneID=comp144926_c0_seq1.path1;Name=comp144926_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=446;mismatches=1;indels=0;unknowns=0;Target=comp144926_c0_seq1 28 99 +;locus=RLOC_00020448
Chr2	stalkie_big_nohaplotig	exon	110094296	110094719	99	+	.	Parent=comp144926_c0_seq1.mrna1;Target=comp144926_c0_seq1 1 424 +
Chr2	stalkie_big_nohaplotig	exon	110096776	110096798	100	+	.	Parent=comp144926_c0_seq1.mrna1;Target=comp144926_c0_seq1 425 447 +
Chr2	stalkie_big_nohaplotig	CDS	110094323	110094394	.	+	0	Parent=comp144926_c0_seq1.mrna1
Chr2	gffcl	locus	110107254	110107425	.	+	.	ID=RLOC_00020449;geneIDs=comp228140_c0_seq1.path1;transcripts=comp228140_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110107254	110107425	.	+	.	ID=comp228140_c0_seq1.mrna1;geneID=comp228140_c0_seq1.path1;Name=comp228140_c0_seq1;Dir=indeterminatecoverage=78.5;identity=100.0;matches=172;mismatches=0;indels=0;unknowns=0;Target=comp228140_c0_seq1 202 31 .;CDS_Target=comp228140_c0_seq1 196 116 .;locus=RLOC_00020449
Chr2	stalkie_big_nohaplotig	exon	110107254	110107425	100	+	.	Parent=comp228140_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110107339	110107419	.	+	0	Parent=comp228140_c0_seq1.mrna1
Chr2	gffcl	locus	110112631	110113344	.	-	.	ID=RLOC_00020450;geneIDs=comp117911_c0_seq1.path1;transcripts=comp117911_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110112631	110113344	.	-	.	ID=comp117911_c0_seq1.mrna1;geneID=comp117911_c0_seq1.path1;Name=comp117911_c0_seq1;Dir=indeterminatecoverage=96.9;identity=99.9;matches=713;mismatches=1;indels=0;unknowns=0;Target=comp117911_c0_seq1 714 1 .;CDS_Target=comp117911_c0_seq1 222 100 .;locus=RLOC_00020450
Chr2	stalkie_big_nohaplotig	exon	110112631	110113344	99	-	.	Parent=comp117911_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110113123	110113245	.	-	0	Parent=comp117911_c0_seq1.mrna1
Chr2	gffcl	locus	110134672	110135615	.	+	.	ID=RLOC_00020451;geneIDs=comp150065_c1_seq1.path1;transcripts=comp150065_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110134672	110135615	.	+	.	ID=comp150065_c1_seq1.mrna1;geneID=comp150065_c1_seq1.path1;Name=comp150065_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=940;mismatches=1;indels=0;unknowns=0;Target=comp150065_c1_seq1 610 491 .;locus=RLOC_00020451
Chr2	stalkie_big_nohaplotig	exon	110134672	110134790	100	+	.	Parent=comp150065_c1_seq1.mrna1;Target=comp150065_c1_seq1 119 1 .
Chr2	stalkie_big_nohaplotig	exon	110134794	110135615	99	+	.	Parent=comp150065_c1_seq1.mrna1;Target=comp150065_c1_seq1 986 165 .
Chr2	stalkie_big_nohaplotig	CDS	110135120	110135239	.	+	0	Parent=comp150065_c1_seq1.mrna1
Chr2	gffcl	locus	110139125	110139871	.	-	.	ID=RLOC_00020452;geneIDs=comp150284_c0_seq1.path1;transcripts=comp150284_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110139125	110139871	.	-	.	ID=comp150284_c0_seq1.mrna1;geneID=comp150284_c0_seq1.path1;Name=comp150284_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.1;matches=744;mismatches=3;indels=4;unknowns=0;Target=comp150284_c0_seq1 752 2 .;CDS_Target=comp150284_c0_seq1 736 620 .;locus=RLOC_00020452
Chr2	stalkie_big_nohaplotig	exon	110139125	110139871	99	-	.	Parent=comp150284_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110139141	110139257	.	-	0	Parent=comp150284_c0_seq1.mrna1
Chr2	gffcl	locus	110149174	110151199	.	+	.	ID=RLOC_00020453;geneIDs=FBgn0261049.1.path1;transcripts=FBgn0261049.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110149174	110151199	.	+	.	ID=FBgn0261049.1.mrna1;geneID=FBgn0261049.1.path1;Name=FBgn0261049.1;Dir=sensecoverage=100.0;identity=100.0;matches=1728;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020453
Chr2	stalkie_big_nohaplotig	exon	110149174	110149272	100	+	.	Parent=FBgn0261049.1.mrna1;Target=FBgn0261049.1 1 99 +
Chr2	stalkie_big_nohaplotig	exon	110149330	110149408	100	+	.	Parent=FBgn0261049.1.mrna1;Target=FBgn0261049.1 100 178 +
Chr2	stalkie_big_nohaplotig	exon	110149527	110149646	100	+	.	Parent=FBgn0261049.1.mrna1;Target=FBgn0261049.1 179 298 +
Chr2	stalkie_big_nohaplotig	exon	110149706	110150784	100	+	.	Parent=FBgn0261049.1.mrna1;Target=FBgn0261049.1 299 1377 +
Chr2	stalkie_big_nohaplotig	exon	110150849	110151199	100	+	.	Parent=FBgn0261049.1.mrna1;Target=FBgn0261049.1 1378 1728 +
Chr2	stalkie_big_nohaplotig	CDS	110149174	110149272	.	+	0	Parent=FBgn0261049.1.mrna1;Target=FBgn0261049.1 1 99 +
Chr2	stalkie_big_nohaplotig	CDS	110149330	110149408	.	+	0	Parent=FBgn0261049.1.mrna1;Target=FBgn0261049.1 100 178 +
Chr2	stalkie_big_nohaplotig	CDS	110149527	110149646	.	+	2	Parent=FBgn0261049.1.mrna1;Target=FBgn0261049.1 179 298 +
Chr2	stalkie_big_nohaplotig	CDS	110149706	110150784	.	+	2	Parent=FBgn0261049.1.mrna1;Target=FBgn0261049.1 299 1377 +
Chr2	stalkie_big_nohaplotig	CDS	110150849	110151199	.	+	0	Parent=FBgn0261049.1.mrna1;Target=FBgn0261049.1 1378 1728 +
Chr2	gffcl	locus	110152128	110156377	.	-	.	ID=RLOC_00020454;geneIDs=FBgn0037924.1.path1;transcripts=FBgn0037924.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110152128	110156377	.	-	.	ID=FBgn0037924.1.mrna1;geneID=FBgn0037924.1.path1;Name=FBgn0037924.1;Dir=sensecoverage=100.0;identity=99.9;matches=3964;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020454
Chr2	stalkie_big_nohaplotig	exon	110152128	110155349	99	-	.	Parent=FBgn0037924.1.mrna1;Target=FBgn0037924.1 745 3966 +
Chr2	stalkie_big_nohaplotig	exon	110155417	110155616	100	-	.	Parent=FBgn0037924.1.mrna1;Target=FBgn0037924.1 545 744 +
Chr2	stalkie_big_nohaplotig	exon	110155681	110155883	100	-	.	Parent=FBgn0037924.1.mrna1;Target=FBgn0037924.1 342 544 +
Chr2	stalkie_big_nohaplotig	exon	110155971	110156126	100	-	.	Parent=FBgn0037924.1.mrna1;Target=FBgn0037924.1 186 341 +
Chr2	stalkie_big_nohaplotig	exon	110156193	110156377	100	-	.	Parent=FBgn0037924.1.mrna1;Target=FBgn0037924.1 1 185 +
Chr2	stalkie_big_nohaplotig	CDS	110152128	110155349	.	-	0	Parent=FBgn0037924.1.mrna1;Target=FBgn0037924.1 745 3966 +
Chr2	stalkie_big_nohaplotig	CDS	110155417	110155616	.	-	2	Parent=FBgn0037924.1.mrna1;Target=FBgn0037924.1 545 744 +
Chr2	stalkie_big_nohaplotig	CDS	110155681	110155883	.	-	1	Parent=FBgn0037924.1.mrna1;Target=FBgn0037924.1 342 544 +
Chr2	stalkie_big_nohaplotig	CDS	110155971	110156126	.	-	1	Parent=FBgn0037924.1.mrna1;Target=FBgn0037924.1 186 341 +
Chr2	stalkie_big_nohaplotig	CDS	110156193	110156377	.	-	0	Parent=FBgn0037924.1.mrna1;Target=FBgn0037924.1 1 185 +
Chr2	gffcl	locus	110161363	110162469	.	-	.	ID=RLOC_00020455;geneIDs=FBgn0039304.1.path1;transcripts=FBgn0039304.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110161363	110162469	.	-	.	ID=FBgn0039304.1.mrna1;geneID=FBgn0039304.1.path1;Name=FBgn0039304.1;Dir=sensecoverage=100.0;identity=100.0;matches=996;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020455
Chr2	stalkie_big_nohaplotig	exon	110161363	110161557	100	-	.	Parent=FBgn0039304.1.mrna1;Target=FBgn0039304.1 802 996 +
Chr2	stalkie_big_nohaplotig	exon	110161613	110162181	100	-	.	Parent=FBgn0039304.1.mrna1;Target=FBgn0039304.1 233 801 +
Chr2	stalkie_big_nohaplotig	exon	110162238	110162469	100	-	.	Parent=FBgn0039304.1.mrna1;Target=FBgn0039304.1 1 232 +
Chr2	stalkie_big_nohaplotig	CDS	110161363	110161557	.	-	0	Parent=FBgn0039304.1.mrna1;Target=FBgn0039304.1 802 996 +
Chr2	stalkie_big_nohaplotig	CDS	110161613	110162181	.	-	2	Parent=FBgn0039304.1.mrna1;Target=FBgn0039304.1 233 801 +
Chr2	stalkie_big_nohaplotig	CDS	110162238	110162469	.	-	0	Parent=FBgn0039304.1.mrna1;Target=FBgn0039304.1 1 232 +
Chr2	stalkie_big_nohaplotig	mRNA	110164470	110165234	.	+	.	ID=comp149717_c0_seq1.mrna1;geneID=comp149717_c0_seq1.path1;Name=comp149717_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=764;mismatches=1;indels=0;unknowns=0;Target=comp149717_c0_seq1 765 1 .;CDS_Target=comp149717_c0_seq1 618 517 .;locus=RLOC_00020456
Chr2	stalkie_big_nohaplotig	exon	110164470	110165234	99	+	.	Parent=comp149717_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110164986	110165087	.	+	0	Parent=comp149717_c0_seq1.mrna1
Chr2	gffcl	locus	110170387	110173571	.	-	.	ID=RLOC_00020457;geneIDs=FBgn0037710.1.path1;transcripts=FBgn0037710.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110170387	110173571	.	-	.	ID=FBgn0037710.1.mrna1;geneID=FBgn0037710.1.path1;Name=FBgn0037710.1;Dir=sensecoverage=100.0;identity=99.9;matches=1007;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020457
Chr2	stalkie_big_nohaplotig	exon	110170387	110170464	100	-	.	Parent=FBgn0037710.1.mrna1;Target=FBgn0037710.1 931 1008 +
Chr2	stalkie_big_nohaplotig	exon	110172131	110172523	100	-	.	Parent=FBgn0037710.1.mrna1;Target=FBgn0037710.1 538 930 +
Chr2	stalkie_big_nohaplotig	exon	110172584	110172859	99	-	.	Parent=FBgn0037710.1.mrna1;Target=FBgn0037710.1 262 537 +
Chr2	stalkie_big_nohaplotig	exon	110173228	110173377	100	-	.	Parent=FBgn0037710.1.mrna1;Target=FBgn0037710.1 112 261 +
Chr2	stalkie_big_nohaplotig	exon	110173461	110173571	100	-	.	Parent=FBgn0037710.1.mrna1;Target=FBgn0037710.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	110170387	110170464	.	-	0	Parent=FBgn0037710.1.mrna1;Target=FBgn0037710.1 931 1008 +
Chr2	stalkie_big_nohaplotig	CDS	110172131	110172523	.	-	0	Parent=FBgn0037710.1.mrna1;Target=FBgn0037710.1 538 930 +
Chr2	stalkie_big_nohaplotig	CDS	110172584	110172859	.	-	0	Parent=FBgn0037710.1.mrna1;Target=FBgn0037710.1 262 537 +
Chr2	stalkie_big_nohaplotig	CDS	110173228	110173377	.	-	0	Parent=FBgn0037710.1.mrna1;Target=FBgn0037710.1 112 261 +
Chr2	stalkie_big_nohaplotig	CDS	110173461	110173571	.	-	0	Parent=FBgn0037710.1.mrna1;Target=FBgn0037710.1 1 111 +
Chr2	gffcl	locus	110174911	110177168	.	+	.	ID=RLOC_00020458;geneIDs=FBgn0040237.1.path1;transcripts=FBgn0040237.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110174911	110177168	.	+	.	ID=FBgn0040237.1.mrna1;geneID=FBgn0040237.1.path1;Name=FBgn0040237.1;Dir=sensecoverage=100.0;identity=99.9;matches=1769;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020458
Chr2	stalkie_big_nohaplotig	exon	110174911	110175118	100	+	.	Parent=FBgn0040237.1.mrna1;Target=FBgn0040237.1 1 208 +
Chr2	stalkie_big_nohaplotig	exon	110175199	110175353	100	+	.	Parent=FBgn0040237.1.mrna1;Target=FBgn0040237.1 209 363 +
Chr2	stalkie_big_nohaplotig	exon	110175512	110175624	100	+	.	Parent=FBgn0040237.1.mrna1;Target=FBgn0040237.1 364 476 +
Chr2	stalkie_big_nohaplotig	exon	110175683	110175889	100	+	.	Parent=FBgn0040237.1.mrna1;Target=FBgn0040237.1 477 683 +
Chr2	stalkie_big_nohaplotig	exon	110175959	110176783	100	+	.	Parent=FBgn0040237.1.mrna1;Target=FBgn0040237.1 684 1508 +
Chr2	stalkie_big_nohaplotig	exon	110176842	110177040	99	+	.	Parent=FBgn0040237.1.mrna1;Target=FBgn0040237.1 1509 1707 +
Chr2	stalkie_big_nohaplotig	exon	110177106	110177168	100	+	.	Parent=FBgn0040237.1.mrna1;Target=FBgn0040237.1 1708 1770 +
Chr2	stalkie_big_nohaplotig	CDS	110174911	110175118	.	+	0	Parent=FBgn0040237.1.mrna1;Target=FBgn0040237.1 1 208 +
Chr2	stalkie_big_nohaplotig	CDS	110175199	110175353	.	+	2	Parent=FBgn0040237.1.mrna1;Target=FBgn0040237.1 209 363 +
Chr2	stalkie_big_nohaplotig	CDS	110175512	110175624	.	+	0	Parent=FBgn0040237.1.mrna1;Target=FBgn0040237.1 364 476 +
Chr2	stalkie_big_nohaplotig	CDS	110175683	110175889	.	+	1	Parent=FBgn0040237.1.mrna1;Target=FBgn0040237.1 477 683 +
Chr2	stalkie_big_nohaplotig	CDS	110175959	110176783	.	+	1	Parent=FBgn0040237.1.mrna1;Target=FBgn0040237.1 684 1508 +
Chr2	stalkie_big_nohaplotig	CDS	110176842	110177040	.	+	1	Parent=FBgn0040237.1.mrna1;Target=FBgn0040237.1 1509 1707 +
Chr2	stalkie_big_nohaplotig	CDS	110177106	110177168	.	+	0	Parent=FBgn0040237.1.mrna1;Target=FBgn0040237.1 1708 1770 +
Chr2	gffcl	locus	110178986	110181417	.	-	.	ID=RLOC_00020459;geneIDs=FBgn0260741.1.path1;transcripts=FBgn0260741.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110178986	110181417	.	-	.	ID=FBgn0260741.1.mrna1;geneID=FBgn0260741.1.path1;Name=FBgn0260741.1;Dir=sensecoverage=100.0;identity=99.9;matches=1438;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020459
Chr2	stalkie_big_nohaplotig	exon	110178986	110179235	100	-	.	Parent=FBgn0260741.1.mrna1;Target=FBgn0260741.1 1191 1440 +
Chr2	stalkie_big_nohaplotig	exon	110179313	110179954	99	-	.	Parent=FBgn0260741.1.mrna1;Target=FBgn0260741.1 549 1190 +
Chr2	stalkie_big_nohaplotig	exon	110180813	110181195	100	-	.	Parent=FBgn0260741.1.mrna1;Target=FBgn0260741.1 166 548 +
Chr2	stalkie_big_nohaplotig	exon	110181253	110181417	100	-	.	Parent=FBgn0260741.1.mrna1;Target=FBgn0260741.1 1 165 +
Chr2	stalkie_big_nohaplotig	CDS	110178986	110179235	.	-	1	Parent=FBgn0260741.1.mrna1;Target=FBgn0260741.1 1191 1440 +
Chr2	stalkie_big_nohaplotig	CDS	110179313	110179954	.	-	1	Parent=FBgn0260741.1.mrna1;Target=FBgn0260741.1 549 1190 +
Chr2	stalkie_big_nohaplotig	CDS	110180813	110181195	.	-	0	Parent=FBgn0260741.1.mrna1;Target=FBgn0260741.1 166 548 +
Chr2	stalkie_big_nohaplotig	CDS	110181253	110181417	.	-	0	Parent=FBgn0260741.1.mrna1;Target=FBgn0260741.1 1 165 +
Chr2	gffcl	locus	110183440	110185120	.	+	.	ID=RLOC_00020460;geneIDs=FBgn0260742.1.path1;transcripts=FBgn0260742.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110183440	110185120	.	+	.	ID=FBgn0260742.1.mrna1;geneID=FBgn0260742.1.path1;Name=FBgn0260742.1;Dir=sensecoverage=99.9;identity=100.0;matches=1508;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020460
Chr2	stalkie_big_nohaplotig	exon	110183440	110183571	100	+	.	Parent=FBgn0260742.1.mrna1;Target=FBgn0260742.1 1 132 +
Chr2	stalkie_big_nohaplotig	exon	110183634	110183700	100	+	.	Parent=FBgn0260742.1.mrna1;Target=FBgn0260742.1 133 199 +
Chr2	stalkie_big_nohaplotig	exon	110183755	110184071	100	+	.	Parent=FBgn0260742.1.mrna1;Target=FBgn0260742.1 200 516 +
Chr2	stalkie_big_nohaplotig	exon	110184129	110185120	100	+	.	Parent=FBgn0260742.1.mrna1;Target=FBgn0260742.1 517 1508 +
Chr2	stalkie_big_nohaplotig	CDS	110183440	110183571	.	+	0	Parent=FBgn0260742.1.mrna1;Target=FBgn0260742.1 1 132 +
Chr2	stalkie_big_nohaplotig	CDS	110183634	110183700	.	+	0	Parent=FBgn0260742.1.mrna1;Target=FBgn0260742.1 133 199 +
Chr2	stalkie_big_nohaplotig	CDS	110183755	110184071	.	+	2	Parent=FBgn0260742.1.mrna1;Target=FBgn0260742.1 200 516 +
Chr2	stalkie_big_nohaplotig	CDS	110184129	110185118	.	+	0	Parent=FBgn0260742.1.mrna1;Target=FBgn0260742.1 517 1506 +
Chr2	gffcl	locus	110188053	110189354	.	-	.	ID=RLOC_00020461;geneIDs=FBgn0000147.1.path1;transcripts=FBgn0000147.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110188053	110189354	.	-	.	ID=FBgn0000147.1.mrna1;geneID=FBgn0000147.1.path1;Name=FBgn0000147.1;Dir=sensecoverage=100.0;identity=99.9;matches=1172;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020461
Chr2	stalkie_big_nohaplotig	exon	110188053	110188891	99	-	.	Parent=FBgn0000147.1.mrna1;Target=FBgn0000147.1 335 1173 +
Chr2	stalkie_big_nohaplotig	exon	110188953	110189217	100	-	.	Parent=FBgn0000147.1.mrna1;Target=FBgn0000147.1 70 334 +
Chr2	stalkie_big_nohaplotig	exon	110189286	110189354	100	-	.	Parent=FBgn0000147.1.mrna1;Target=FBgn0000147.1 1 69 +
Chr2	stalkie_big_nohaplotig	CDS	110188053	110188891	.	-	2	Parent=FBgn0000147.1.mrna1;Target=FBgn0000147.1 335 1173 +
Chr2	stalkie_big_nohaplotig	CDS	110188953	110189217	.	-	0	Parent=FBgn0000147.1.mrna1;Target=FBgn0000147.1 70 334 +
Chr2	stalkie_big_nohaplotig	CDS	110189286	110189354	.	-	0	Parent=FBgn0000147.1.mrna1;Target=FBgn0000147.1 1 69 +
Chr2	gffcl	locus	110190968	110950600	.	+	.	ID=RLOC_00020462;geneIDs=ORF358.path1,comp162506_c1_seq1.path1;transcripts=comp162506_c1_seq1.mrna1,ORF358.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110190968	110950600	.	+	.	ID=comp162506_c1_seq1.mrna1;geneID=comp162506_c1_seq1.path1;Name=comp162506_c1_seq1;Dir=sensecoverage=44.5;identity=99.9;matches=2949;mismatches=1;indels=1;unknowns=0;locus=RLOC_00020462
Chr2	stalkie_big_nohaplotig	exon	110190968	110191689	100	+	.	Parent=comp162506_c1_seq1.mrna1;Target=comp162506_c1_seq1 1 722 +
Chr2	stalkie_big_nohaplotig	exon	110191763	110192006	100	+	.	Parent=comp162506_c1_seq1.mrna1;Target=comp162506_c1_seq1 723 966 +
Chr2	stalkie_big_nohaplotig	exon	110197034	110197527	100	+	.	Parent=comp162506_c1_seq1.mrna1;Target=comp162506_c1_seq1 967 1460 +
Chr2	stalkie_big_nohaplotig	exon	110197743	110198177	100	+	.	Parent=comp162506_c1_seq1.mrna1;Target=comp162506_c1_seq1 1461 1895 +
Chr2	stalkie_big_nohaplotig	exon	110200285	110200376	100	+	.	Parent=comp162506_c1_seq1.mrna1;Target=comp162506_c1_seq1 1896 1987 +
Chr2	stalkie_big_nohaplotig	exon	110200438	110200723	100	+	.	Parent=comp162506_c1_seq1.mrna1;Target=comp162506_c1_seq1 1988 2273 +
Chr2	stalkie_big_nohaplotig	exon	110201543	110202160	99	+	.	Parent=comp162506_c1_seq1.mrna1;Target=comp162506_c1_seq1 2274 2892 +
Chr2	stalkie_big_nohaplotig	exon	110921318	110921324	100	+	.	Parent=comp162506_c1_seq1.mrna1;Target=comp162506_c1_seq1 2893 2899 +
Chr2	stalkie_big_nohaplotig	exon	110924062	110924067	100	+	.	Parent=comp162506_c1_seq1.mrna1;Target=comp162506_c1_seq1 2900 2905 +
Chr2	stalkie_big_nohaplotig	exon	110929461	110929471	90	+	.	Parent=comp162506_c1_seq1.mrna1;Target=comp162506_c1_seq1 2906 2916 +
Chr2	stalkie_big_nohaplotig	exon	110934102	110934109	100	+	.	Parent=comp162506_c1_seq1.mrna1;Target=comp162506_c1_seq1 2917 2924 +
Chr2	stalkie_big_nohaplotig	exon	110941618	110941623	100	+	.	Parent=comp162506_c1_seq1.mrna1;Target=comp162506_c1_seq1 2925 2930 +
Chr2	stalkie_big_nohaplotig	exon	110946078	110946079	100	+	.	Parent=comp162506_c1_seq1.mrna1;Target=comp162506_c1_seq1 2931 2932 +
Chr2	stalkie_big_nohaplotig	exon	110947259	110947270	100	+	.	Parent=comp162506_c1_seq1.mrna1;Target=comp162506_c1_seq1 2933 2944 +
Chr2	stalkie_big_nohaplotig	exon	110950594	110950600	100	+	.	Parent=comp162506_c1_seq1.mrna1;Target=comp162506_c1_seq1 2945 2951 +
Chr2	stalkie_big_nohaplotig	CDS	110191296	110191689	.	+	0	Parent=comp162506_c1_seq1.mrna1;Target=comp162506_c1_seq1 329 722 +
Chr2	stalkie_big_nohaplotig	CDS	110191763	110192006	.	+	2	Parent=comp162506_c1_seq1.mrna1;Target=comp162506_c1_seq1 723 966 +
Chr2	stalkie_big_nohaplotig	CDS	110197034	110197247	.	+	1	Parent=comp162506_c1_seq1.mrna1;Target=comp162506_c1_seq1 967 1180 +
Chr2	stalkie_big_nohaplotig	mRNA	110191263	110201951	.	+	.	ID=ORF358.mrna1;geneID=ORF358.path1;Name=ORF358;Dir=sensecoverage=100.0;identity=99.9;matches=1961;mismatches=0;indels=1;unknowns=0;locus=RLOC_00020462
Chr2	stalkie_big_nohaplotig	exon	110191263	110191689	100	+	.	Parent=ORF358.mrna1;Target=ORF358 1 427 +
Chr2	stalkie_big_nohaplotig	exon	110191763	110192006	100	+	.	Parent=ORF358.mrna1;Target=ORF358 428 671 +
Chr2	stalkie_big_nohaplotig	exon	110197034	110197202	100	+	.	Parent=ORF358.mrna1;Target=ORF358 672 840 +
Chr2	stalkie_big_nohaplotig	exon	110197354	110197527	100	+	.	Parent=ORF358.mrna1;Target=ORF358 841 1014 +
Chr2	stalkie_big_nohaplotig	exon	110197743	110197845	100	+	.	Parent=ORF358.mrna1;Target=ORF358 1015 1117 +
Chr2	stalkie_big_nohaplotig	exon	110198121	110198177	100	+	.	Parent=ORF358.mrna1;Target=ORF358 1118 1174 +
Chr2	stalkie_big_nohaplotig	exon	110200285	110200376	100	+	.	Parent=ORF358.mrna1;Target=ORF358 1175 1266 +
Chr2	stalkie_big_nohaplotig	exon	110200438	110200723	100	+	.	Parent=ORF358.mrna1;Target=ORF358 1267 1552 +
Chr2	stalkie_big_nohaplotig	exon	110201543	110201951	99	+	.	Parent=ORF358.mrna1;Target=ORF358 1553 1962 +
Chr2	stalkie_big_nohaplotig	CDS	110191263	110191689	.	+	0	Parent=ORF358.mrna1;Target=ORF358 1 427 +
Chr2	stalkie_big_nohaplotig	CDS	110191763	110192006	.	+	2	Parent=ORF358.mrna1;Target=ORF358 428 671 +
Chr2	stalkie_big_nohaplotig	CDS	110197034	110197202	.	+	1	Parent=ORF358.mrna1;Target=ORF358 672 840 +
Chr2	stalkie_big_nohaplotig	CDS	110197354	110197527	.	+	0	Parent=ORF358.mrna1;Target=ORF358 841 1014 +
Chr2	stalkie_big_nohaplotig	CDS	110197743	110197845	.	+	0	Parent=ORF358.mrna1;Target=ORF358 1015 1117 +
Chr2	stalkie_big_nohaplotig	CDS	110198121	110198177	.	+	2	Parent=ORF358.mrna1;Target=ORF358 1118 1174 +
Chr2	stalkie_big_nohaplotig	CDS	110200285	110200376	.	+	2	Parent=ORF358.mrna1;Target=ORF358 1175 1266 +
Chr2	stalkie_big_nohaplotig	CDS	110200438	110200723	.	+	0	Parent=ORF358.mrna1;Target=ORF358 1267 1552 +
Chr2	stalkie_big_nohaplotig	CDS	110201543	110201951	.	+	2	Parent=ORF358.mrna1;Target=ORF358 1553 1962 +
Chr2	gffcl	locus	110193485	110195224	.	-	.	ID=RLOC_00020463;geneIDs=FBgn0036962.1.path1;transcripts=FBgn0036962.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110193485	110195224	.	-	.	ID=FBgn0036962.1.mrna1;geneID=FBgn0036962.1.path1;Name=FBgn0036962.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1737;mismatches=3;indels=0;unknowns=0;Target=FBgn0036962.1 1740 1 .;locus=RLOC_00020463
Chr2	stalkie_big_nohaplotig	exon	110193485	110195224	99	-	.	Parent=FBgn0036962.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110193485	110195224	.	-	0	Parent=FBgn0036962.1.mrna1
Chr2	gffcl	locus	110212318	110220444	.	+	.	ID=RLOC_00020464;geneIDs=FBgn0260743.1.path1;transcripts=FBgn0260743.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110212318	110220444	.	+	.	ID=FBgn0260743.1.mrna1;geneID=FBgn0260743.1.path1;Name=FBgn0260743.1;Dir=sensecoverage=99.8;identity=99.9;matches=978;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020464
Chr2	stalkie_big_nohaplotig	exon	110212318	110212380	98	+	.	Parent=FBgn0260743.1.mrna1;Target=FBgn0260743.1 3 65 +
Chr2	stalkie_big_nohaplotig	exon	110218690	110218824	100	+	.	Parent=FBgn0260743.1.mrna1;Target=FBgn0260743.1 66 200 +
Chr2	stalkie_big_nohaplotig	exon	110218889	110219192	100	+	.	Parent=FBgn0260743.1.mrna1;Target=FBgn0260743.1 201 504 +
Chr2	stalkie_big_nohaplotig	exon	110219252	110219433	100	+	.	Parent=FBgn0260743.1.mrna1;Target=FBgn0260743.1 505 686 +
Chr2	stalkie_big_nohaplotig	exon	110219490	110219630	100	+	.	Parent=FBgn0260743.1.mrna1;Target=FBgn0260743.1 687 827 +
Chr2	stalkie_big_nohaplotig	exon	110220291	110220444	100	+	.	Parent=FBgn0260743.1.mrna1;Target=FBgn0260743.1 828 981 +
Chr2	stalkie_big_nohaplotig	CDS	110212319	110212380	.	+	0	Parent=FBgn0260743.1.mrna1;Target=FBgn0260743.1 4 65 +
Chr2	stalkie_big_nohaplotig	CDS	110218690	110218824	.	+	1	Parent=FBgn0260743.1.mrna1;Target=FBgn0260743.1 66 200 +
Chr2	stalkie_big_nohaplotig	CDS	110218889	110219192	.	+	1	Parent=FBgn0260743.1.mrna1;Target=FBgn0260743.1 201 504 +
Chr2	stalkie_big_nohaplotig	CDS	110219252	110219433	.	+	0	Parent=FBgn0260743.1.mrna1;Target=FBgn0260743.1 505 686 +
Chr2	stalkie_big_nohaplotig	CDS	110219490	110219630	.	+	1	Parent=FBgn0260743.1.mrna1;Target=FBgn0260743.1 687 827 +
Chr2	stalkie_big_nohaplotig	CDS	110220291	110220444	.	+	1	Parent=FBgn0260743.1.mrna1;Target=FBgn0260743.1 828 981 +
Chr2	gffcl	locus	110226123	110231415	.	.	.	ID=RLOC_00020466;geneIDs=FBgn0037972.1.path1,comp146552_c0_seq1.path1,comp154653_c0_seq1.path1;transcripts=comp146552_c0_seq1.mrna1,FBgn0037972.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110226123	110229514	.	-	.	ID=comp146552_c0_seq1.mrna1;geneID=comp146552_c0_seq1.path1;Name=comp146552_c0_seq1;Dir=antisensecoverage=98.4;identity=100.0;matches=1947;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020466
Chr2	stalkie_big_nohaplotig	exon	110226123	110226303	100	-	.	Parent=comp146552_c0_seq1.mrna1;Target=comp146552_c0_seq1 2 182 -
Chr2	stalkie_big_nohaplotig	exon	110226359	110226679	100	-	.	Parent=comp146552_c0_seq1.mrna1;Target=comp146552_c0_seq1 183 503 -
Chr2	stalkie_big_nohaplotig	exon	110226936	110227007	100	-	.	Parent=comp146552_c0_seq1.mrna1;Target=comp146552_c0_seq1 504 575 -
Chr2	stalkie_big_nohaplotig	exon	110227106	110227499	100	-	.	Parent=comp146552_c0_seq1.mrna1;Target=comp146552_c0_seq1 576 969 -
Chr2	stalkie_big_nohaplotig	exon	110228536	110229514	100	-	.	Parent=comp146552_c0_seq1.mrna1;Target=comp146552_c0_seq1 970 1948 -
Chr2	stalkie_big_nohaplotig	CDS	110226965	110227007	.	-	1	Parent=comp146552_c0_seq1.mrna1;Target=comp146552_c0_seq1 533 575 .
Chr2	stalkie_big_nohaplotig	CDS	110227106	110227499	.	-	2	Parent=comp146552_c0_seq1.mrna1;Target=comp146552_c0_seq1 576 969 .
Chr2	stalkie_big_nohaplotig	CDS	110228536	110228647	.	-	0	Parent=comp146552_c0_seq1.mrna1;Target=comp146552_c0_seq1 970 1081 .
Chr2	stalkie_big_nohaplotig	mRNA	110226508	110228659	.	-	.	ID=FBgn0037972.1.mrna1;geneID=FBgn0037972.1.path1;Name=FBgn0037972.1;Dir=sensecoverage=100.0;identity=100.0;matches=690;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020466
Chr2	stalkie_big_nohaplotig	exon	110226508	110226679	100	-	.	Parent=FBgn0037972.1.mrna1;Target=FBgn0037972.1 519 690 +
Chr2	stalkie_big_nohaplotig	exon	110227106	110227499	100	-	.	Parent=FBgn0037972.1.mrna1;Target=FBgn0037972.1 125 518 +
Chr2	stalkie_big_nohaplotig	exon	110228536	110228659	100	-	.	Parent=FBgn0037972.1.mrna1;Target=FBgn0037972.1 1 124 +
Chr2	stalkie_big_nohaplotig	CDS	110226508	110226679	.	-	1	Parent=FBgn0037972.1.mrna1;Target=FBgn0037972.1 519 690 +
Chr2	stalkie_big_nohaplotig	CDS	110227106	110227499	.	-	2	Parent=FBgn0037972.1.mrna1;Target=FBgn0037972.1 125 518 +
Chr2	stalkie_big_nohaplotig	CDS	110228536	110228659	.	-	0	Parent=FBgn0037972.1.mrna1;Target=FBgn0037972.1 1 124 +
Chr2	gffcl	locus	110231478	110234695	.	-	.	ID=RLOC_00020467;geneIDs=FBgn0037973.1.path1;transcripts=FBgn0037973.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110231478	110234695	.	-	.	ID=FBgn0037973.1.mrna1;geneID=FBgn0037973.1.path1;Name=FBgn0037973.1;Dir=sensecoverage=100.0;identity=100.0;matches=1044;mismatches=0;indels=0;unknowns=6;locus=RLOC_00020467
Chr2	stalkie_big_nohaplotig	exon	110231478	110231550	100	-	.	Parent=FBgn0037973.1.mrna1;Target=FBgn0037973.1 978 1050 +
Chr2	stalkie_big_nohaplotig	exon	110231943	110232316	100	-	.	Parent=FBgn0037973.1.mrna1;Target=FBgn0037973.1 604 977 +
Chr2	stalkie_big_nohaplotig	exon	110232389	110232553	100	-	.	Parent=FBgn0037973.1.mrna1;Target=FBgn0037973.1 439 603 +
Chr2	stalkie_big_nohaplotig	exon	110234163	110234442	100	-	.	Parent=FBgn0037973.1.mrna1;Target=FBgn0037973.1 159 438 +
Chr2	stalkie_big_nohaplotig	exon	110234538	110234695	100	-	.	Parent=FBgn0037973.1.mrna1;Target=FBgn0037973.1 1 158 +
Chr2	stalkie_big_nohaplotig	CDS	110231478	110231550	.	-	1	Parent=FBgn0037973.1.mrna1;Target=FBgn0037973.1 978 1050 +
Chr2	stalkie_big_nohaplotig	CDS	110231943	110232316	.	-	0	Parent=FBgn0037973.1.mrna1;Target=FBgn0037973.1 604 977 +
Chr2	stalkie_big_nohaplotig	CDS	110232389	110232553	.	-	0	Parent=FBgn0037973.1.mrna1;Target=FBgn0037973.1 439 603 +
Chr2	stalkie_big_nohaplotig	CDS	110234163	110234442	.	-	1	Parent=FBgn0037973.1.mrna1;Target=FBgn0037973.1 159 438 +
Chr2	stalkie_big_nohaplotig	CDS	110234538	110234695	.	-	0	Parent=FBgn0037973.1.mrna1;Target=FBgn0037973.1 1 158 +
Chr2	gffcl	locus	110241577	110263066	.	-	.	ID=RLOC_00020468;geneIDs=FBgn0260745.1.path1;transcripts=FBgn0260745.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110241577	110263066	.	-	.	ID=FBgn0260745.1.mrna1;geneID=FBgn0260745.1.path1;Name=FBgn0260745.1;Dir=sensecoverage=100.0;identity=100.0;matches=2634;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020468
Chr2	stalkie_big_nohaplotig	exon	110241577	110242056	100	-	.	Parent=FBgn0260745.1.mrna1;Target=FBgn0260745.1 2155 2634 +
Chr2	stalkie_big_nohaplotig	exon	110242120	110242820	100	-	.	Parent=FBgn0260745.1.mrna1;Target=FBgn0260745.1 1454 2154 +
Chr2	stalkie_big_nohaplotig	exon	110242886	110243345	100	-	.	Parent=FBgn0260745.1.mrna1;Target=FBgn0260745.1 994 1453 +
Chr2	stalkie_big_nohaplotig	exon	110243421	110243700	100	-	.	Parent=FBgn0260745.1.mrna1;Target=FBgn0260745.1 714 993 +
Chr2	stalkie_big_nohaplotig	exon	110243768	110243959	100	-	.	Parent=FBgn0260745.1.mrna1;Target=FBgn0260745.1 522 713 +
Chr2	stalkie_big_nohaplotig	exon	110248240	110248384	100	-	.	Parent=FBgn0260745.1.mrna1;Target=FBgn0260745.1 377 521 +
Chr2	stalkie_big_nohaplotig	exon	110248689	110248951	100	-	.	Parent=FBgn0260745.1.mrna1;Target=FBgn0260745.1 114 376 +
Chr2	stalkie_big_nohaplotig	exon	110262954	110263066	100	-	.	Parent=FBgn0260745.1.mrna1;Target=FBgn0260745.1 1 113 +
Chr2	stalkie_big_nohaplotig	CDS	110241577	110242056	.	-	0	Parent=FBgn0260745.1.mrna1;Target=FBgn0260745.1 2155 2634 +
Chr2	stalkie_big_nohaplotig	CDS	110242120	110242820	.	-	2	Parent=FBgn0260745.1.mrna1;Target=FBgn0260745.1 1454 2154 +
Chr2	stalkie_big_nohaplotig	CDS	110242886	110243345	.	-	0	Parent=FBgn0260745.1.mrna1;Target=FBgn0260745.1 994 1453 +
Chr2	stalkie_big_nohaplotig	CDS	110243421	110243700	.	-	1	Parent=FBgn0260745.1.mrna1;Target=FBgn0260745.1 714 993 +
Chr2	stalkie_big_nohaplotig	CDS	110243768	110243959	.	-	1	Parent=FBgn0260745.1.mrna1;Target=FBgn0260745.1 522 713 +
Chr2	stalkie_big_nohaplotig	CDS	110248240	110248384	.	-	2	Parent=FBgn0260745.1.mrna1;Target=FBgn0260745.1 377 521 +
Chr2	stalkie_big_nohaplotig	CDS	110248689	110248951	.	-	1	Parent=FBgn0260745.1.mrna1;Target=FBgn0260745.1 114 376 +
Chr2	stalkie_big_nohaplotig	CDS	110262954	110263066	.	-	0	Parent=FBgn0260745.1.mrna1;Target=FBgn0260745.1 1 113 +
Chr2	gffcl	locus	110250863	110251293	.	-	.	ID=RLOC_00020469;geneIDs=comp146970_c0_seq1.path1;transcripts=comp146970_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110250863	110251293	.	-	.	ID=comp146970_c0_seq1.mrna1;geneID=comp146970_c0_seq1.path1;Name=comp146970_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.3;matches=427;mismatches=4;indels=17;unknowns=0;Target=comp146970_c0_seq1 448 1 .;CDS_Target=comp146970_c0_seq1 156 1 .;locus=RLOC_00020469
Chr2	stalkie_big_nohaplotig	exon	110250863	110251293	95	-	.	Parent=comp146970_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110251151	110251293	.	-	0	Parent=comp146970_c0_seq1.mrna1
Chr2	gffcl	locus	110263129	110263532	.	+	.	ID=RLOC_00020470;geneIDs=comp152274_c0_seq1.path1;transcripts=comp152274_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110263129	110263532	.	+	.	ID=comp152274_c0_seq1.mrna1;geneID=comp152274_c0_seq1.path1;Name=comp152274_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=398;mismatches=5;indels=1;unknowns=0;Target=comp152274_c0_seq1 403 1 .;CDS_Target=comp152274_c0_seq1 402 331 .;locus=RLOC_00020470
Chr2	stalkie_big_nohaplotig	exon	110263129	110263532	98	+	.	Parent=comp152274_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110263460	110263531	.	+	0	Parent=comp152274_c0_seq1.mrna1
Chr2	gffcl	locus	110264713	110265121	.	+	.	ID=RLOC_00020471;geneIDs=comp127985_c0_seq1.path1;transcripts=comp127985_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110264713	110265121	.	+	.	ID=comp127985_c0_seq1.mrna1;geneID=comp127985_c0_seq1.path1;Name=comp127985_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.1;matches=407;mismatches=2;indels=6;unknowns=0;Target=comp127985_c0_seq1 415 1 .;CDS_Target=comp127985_c0_seq1 131 57 .;locus=RLOC_00020471
Chr2	stalkie_big_nohaplotig	exon	110264713	110265121	98	+	.	Parent=comp127985_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110264769	110264843	.	+	0	Parent=comp127985_c0_seq1.mrna1
Chr2	gffcl	locus	110265427	110266491	.	-	.	ID=RLOC_00020472;geneIDs=FBgn0037469.1.path1;transcripts=FBgn0037469.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110265427	110266491	.	-	.	ID=FBgn0037469.1.mrna1;geneID=FBgn0037469.1.path1;Name=FBgn0037469.1;Dir=sensecoverage=100.0;identity=100.0;matches=939;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020472
Chr2	stalkie_big_nohaplotig	exon	110265427	110265736	100	-	.	Parent=FBgn0037469.1.mrna1;Target=FBgn0037469.1 630 939 +
Chr2	stalkie_big_nohaplotig	exon	110265801	110266092	100	-	.	Parent=FBgn0037469.1.mrna1;Target=FBgn0037469.1 338 629 +
Chr2	stalkie_big_nohaplotig	exon	110266155	110266491	100	-	.	Parent=FBgn0037469.1.mrna1;Target=FBgn0037469.1 1 337 +
Chr2	stalkie_big_nohaplotig	CDS	110265427	110265736	.	-	1	Parent=FBgn0037469.1.mrna1;Target=FBgn0037469.1 630 939 +
Chr2	stalkie_big_nohaplotig	CDS	110265801	110266092	.	-	2	Parent=FBgn0037469.1.mrna1;Target=FBgn0037469.1 338 629 +
Chr2	stalkie_big_nohaplotig	CDS	110266155	110266491	.	-	0	Parent=FBgn0037469.1.mrna1;Target=FBgn0037469.1 1 337 +
Chr2	gffcl	locus	110268460	110270074	.	+	.	ID=RLOC_00020473;geneIDs=FBgn0010774.1.path1;transcripts=FBgn0010774.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110268460	110270074	.	+	.	ID=FBgn0010774.1.mrna1;geneID=FBgn0010774.1.path1;Name=FBgn0010774.1;Dir=sensecoverage=100.0;identity=100.0;matches=807;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020473
Chr2	stalkie_big_nohaplotig	exon	110268460	110268717	100	+	.	Parent=FBgn0010774.1.mrna1;Target=FBgn0010774.1 1 258 +
Chr2	stalkie_big_nohaplotig	exon	110269414	110269615	100	+	.	Parent=FBgn0010774.1.mrna1;Target=FBgn0010774.1 259 460 +
Chr2	stalkie_big_nohaplotig	exon	110269674	110269868	100	+	.	Parent=FBgn0010774.1.mrna1;Target=FBgn0010774.1 461 655 +
Chr2	stalkie_big_nohaplotig	exon	110269923	110270074	100	+	.	Parent=FBgn0010774.1.mrna1;Target=FBgn0010774.1 656 807 +
Chr2	stalkie_big_nohaplotig	CDS	110268460	110268717	.	+	0	Parent=FBgn0010774.1.mrna1;Target=FBgn0010774.1 1 258 +
Chr2	stalkie_big_nohaplotig	CDS	110269414	110269615	.	+	0	Parent=FBgn0010774.1.mrna1;Target=FBgn0010774.1 259 460 +
Chr2	stalkie_big_nohaplotig	CDS	110269674	110269868	.	+	2	Parent=FBgn0010774.1.mrna1;Target=FBgn0010774.1 461 655 +
Chr2	stalkie_big_nohaplotig	CDS	110269923	110270074	.	+	2	Parent=FBgn0010774.1.mrna1;Target=FBgn0010774.1 656 807 +
Chr2	gffcl	locus	110274951	110276367	.	+	.	ID=RLOC_00020474;geneIDs=FBgn0263979.1.path1;transcripts=FBgn0263979.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110274951	110276367	.	+	.	ID=FBgn0263979.1.mrna1;geneID=FBgn0263979.1.path1;Name=FBgn0263979.1;Dir=sensecoverage=100.0;identity=100.0;matches=1302;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020474
Chr2	stalkie_big_nohaplotig	exon	110274951	110274987	100	+	.	Parent=FBgn0263979.1.mrna1;Target=FBgn0263979.1 1 37 +
Chr2	stalkie_big_nohaplotig	exon	110275044	110275601	100	+	.	Parent=FBgn0263979.1.mrna1;Target=FBgn0263979.1 38 595 +
Chr2	stalkie_big_nohaplotig	exon	110275661	110276367	100	+	.	Parent=FBgn0263979.1.mrna1;Target=FBgn0263979.1 596 1302 +
Chr2	stalkie_big_nohaplotig	CDS	110274951	110274987	.	+	0	Parent=FBgn0263979.1.mrna1;Target=FBgn0263979.1 1 37 +
Chr2	stalkie_big_nohaplotig	CDS	110275044	110275601	.	+	2	Parent=FBgn0263979.1.mrna1;Target=FBgn0263979.1 38 595 +
Chr2	stalkie_big_nohaplotig	CDS	110275661	110276367	.	+	2	Parent=FBgn0263979.1.mrna1;Target=FBgn0263979.1 596 1302 +
Chr2	stalkie_big_nohaplotig	mRNA	110589036	110602432	.	+	.	ID=FBgn0038073.1.mrna1;geneID=FBgn0038073.1.path1;Name=FBgn0038073.1;Dir=sensecoverage=100.0;identity=99.9;matches=3171;mismatches=3;indels=0;unknowns=0;locus=RLOC_00020475
Chr2	stalkie_big_nohaplotig	exon	110589036	110589271	100	+	.	Parent=FBgn0038073.1.mrna1;Target=FBgn0038073.1 1 236 +
Chr2	stalkie_big_nohaplotig	exon	110598358	110598721	100	+	.	Parent=FBgn0038073.1.mrna1;Target=FBgn0038073.1 237 600 +
Chr2	stalkie_big_nohaplotig	exon	110598791	110599038	100	+	.	Parent=FBgn0038073.1.mrna1;Target=FBgn0038073.1 601 848 +
Chr2	stalkie_big_nohaplotig	exon	110599157	110600002	99	+	.	Parent=FBgn0038073.1.mrna1;Target=FBgn0038073.1 849 1694 +
Chr2	stalkie_big_nohaplotig	exon	110600087	110600342	100	+	.	Parent=FBgn0038073.1.mrna1;Target=FBgn0038073.1 1695 1950 +
Chr2	stalkie_big_nohaplotig	exon	110601057	110601343	100	+	.	Parent=FBgn0038073.1.mrna1;Target=FBgn0038073.1 1951 2237 +
Chr2	stalkie_big_nohaplotig	exon	110601496	110602432	99	+	.	Parent=FBgn0038073.1.mrna1;Target=FBgn0038073.1 2238 3174 +
Chr2	stalkie_big_nohaplotig	CDS	110589036	110589271	.	+	0	Parent=FBgn0038073.1.mrna1;Target=FBgn0038073.1 1 236 +
Chr2	stalkie_big_nohaplotig	CDS	110598358	110598721	.	+	1	Parent=FBgn0038073.1.mrna1;Target=FBgn0038073.1 237 600 +
Chr2	stalkie_big_nohaplotig	CDS	110598791	110599038	.	+	0	Parent=FBgn0038073.1.mrna1;Target=FBgn0038073.1 601 848 +
Chr2	stalkie_big_nohaplotig	CDS	110599157	110600002	.	+	1	Parent=FBgn0038073.1.mrna1;Target=FBgn0038073.1 849 1694 +
Chr2	stalkie_big_nohaplotig	CDS	110600087	110600342	.	+	1	Parent=FBgn0038073.1.mrna1;Target=FBgn0038073.1 1695 1950 +
Chr2	stalkie_big_nohaplotig	CDS	110601057	110601343	.	+	0	Parent=FBgn0038073.1.mrna1;Target=FBgn0038073.1 1951 2237 +
Chr2	stalkie_big_nohaplotig	CDS	110601496	110602432	.	+	1	Parent=FBgn0038073.1.mrna1;Target=FBgn0038073.1 2238 3174 +
Chr2	gffcl	locus	110276585	110278374	.	-	.	ID=RLOC_00020476;geneIDs=FBgn0038306.1.path1;transcripts=FBgn0038306.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110276585	110278374	.	-	.	ID=FBgn0038306.1.mrna1;geneID=FBgn0038306.1.path1;Name=FBgn0038306.1;Dir=sensecoverage=100.0;identity=99.9;matches=1553;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020476
Chr2	stalkie_big_nohaplotig	exon	110276585	110277275	100	-	.	Parent=FBgn0038306.1.mrna1;Target=FBgn0038306.1 864 1554 +
Chr2	stalkie_big_nohaplotig	exon	110277390	110277577	100	-	.	Parent=FBgn0038306.1.mrna1;Target=FBgn0038306.1 676 863 +
Chr2	stalkie_big_nohaplotig	exon	110277640	110278286	99	-	.	Parent=FBgn0038306.1.mrna1;Target=FBgn0038306.1 29 675 +
Chr2	stalkie_big_nohaplotig	exon	110278347	110278374	100	-	.	Parent=FBgn0038306.1.mrna1;Target=FBgn0038306.1 1 28 +
Chr2	stalkie_big_nohaplotig	CDS	110276585	110277275	.	-	1	Parent=FBgn0038306.1.mrna1;Target=FBgn0038306.1 864 1554 +
Chr2	stalkie_big_nohaplotig	CDS	110277390	110277577	.	-	0	Parent=FBgn0038306.1.mrna1;Target=FBgn0038306.1 676 863 +
Chr2	stalkie_big_nohaplotig	CDS	110277640	110278286	.	-	2	Parent=FBgn0038306.1.mrna1;Target=FBgn0038306.1 29 675 +
Chr2	stalkie_big_nohaplotig	CDS	110278347	110278374	.	-	0	Parent=FBgn0038306.1.mrna1;Target=FBgn0038306.1 1 28 +
Chr2	gffcl	locus	110282799	110284724	.	-	.	ID=RLOC_00020477;geneIDs=FBgn0085345.1.path1;transcripts=FBgn0085345.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110282799	110284724	.	-	.	ID=FBgn0085345.1.mrna1;geneID=FBgn0085345.1.path1;Name=FBgn0085345.1;Dir=sensecoverage=99.6;identity=100.0;matches=783;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020477
Chr2	stalkie_big_nohaplotig	exon	110282799	110282930	100	-	.	Parent=FBgn0085345.1.mrna1;Target=FBgn0085345.1 655 786 +
Chr2	stalkie_big_nohaplotig	exon	110282988	110283143	100	-	.	Parent=FBgn0085345.1.mrna1;Target=FBgn0085345.1 499 654 +
Chr2	stalkie_big_nohaplotig	exon	110284109	110284193	100	-	.	Parent=FBgn0085345.1.mrna1;Target=FBgn0085345.1 414 498 +
Chr2	stalkie_big_nohaplotig	exon	110284260	110284454	100	-	.	Parent=FBgn0085345.1.mrna1;Target=FBgn0085345.1 219 413 +
Chr2	stalkie_big_nohaplotig	exon	110284510	110284724	100	-	.	Parent=FBgn0085345.1.mrna1;Target=FBgn0085345.1 4 218 +
Chr2	stalkie_big_nohaplotig	CDS	110282799	110282930	.	-	0	Parent=FBgn0085345.1.mrna1;Target=FBgn0085345.1 655 786 +
Chr2	stalkie_big_nohaplotig	CDS	110282988	110283143	.	-	0	Parent=FBgn0085345.1.mrna1;Target=FBgn0085345.1 499 654 +
Chr2	stalkie_big_nohaplotig	CDS	110284109	110284193	.	-	1	Parent=FBgn0085345.1.mrna1;Target=FBgn0085345.1 414 498 +
Chr2	stalkie_big_nohaplotig	CDS	110284260	110284454	.	-	1	Parent=FBgn0085345.1.mrna1;Target=FBgn0085345.1 219 413 +
Chr2	stalkie_big_nohaplotig	CDS	110284510	110284724	.	-	0	Parent=FBgn0085345.1.mrna1;Target=FBgn0085345.1 4 218 +
Chr2	gffcl	locus	110287282	110289373	.	+	.	ID=RLOC_00020478;geneIDs=FBgn0037898.1.path1;transcripts=FBgn0037898.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110287282	110289373	.	+	.	ID=FBgn0037898.1.mrna1;geneID=FBgn0037898.1.path1;Name=FBgn0037898.1;Dir=sensecoverage=100.0;identity=100.0;matches=483;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020478
Chr2	stalkie_big_nohaplotig	exon	110287282	110287325	100	+	.	Parent=FBgn0037898.1.mrna1;Target=FBgn0037898.1 1 44 +
Chr2	stalkie_big_nohaplotig	exon	110287389	110287484	100	+	.	Parent=FBgn0037898.1.mrna1;Target=FBgn0037898.1 45 140 +
Chr2	stalkie_big_nohaplotig	exon	110288978	110289213	100	+	.	Parent=FBgn0037898.1.mrna1;Target=FBgn0037898.1 141 376 +
Chr2	stalkie_big_nohaplotig	exon	110289267	110289373	100	+	.	Parent=FBgn0037898.1.mrna1;Target=FBgn0037898.1 377 483 +
Chr2	stalkie_big_nohaplotig	CDS	110287282	110287325	.	+	0	Parent=FBgn0037898.1.mrna1;Target=FBgn0037898.1 1 44 +
Chr2	stalkie_big_nohaplotig	CDS	110287389	110287484	.	+	1	Parent=FBgn0037898.1.mrna1;Target=FBgn0037898.1 45 140 +
Chr2	stalkie_big_nohaplotig	CDS	110288978	110289213	.	+	1	Parent=FBgn0037898.1.mrna1;Target=FBgn0037898.1 141 376 +
Chr2	stalkie_big_nohaplotig	CDS	110289267	110289373	.	+	2	Parent=FBgn0037898.1.mrna1;Target=FBgn0037898.1 377 483 +
Chr2	gffcl	locus	110290550	110376650	.	-	.	ID=RLOC_00020479;geneIDs=FBgn0051363.1.path1,comp154913_c1_seq1.path1;transcripts=comp154913_c1_seq1.mrna1,FBgn0051363.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110290550	110376650	.	-	.	ID=comp154913_c1_seq1.mrna1;geneID=comp154913_c1_seq1.path1;Name=comp154913_c1_seq1;Dir=antisensecoverage=93.1;identity=99.4;matches=2374;mismatches=11;indels=4;unknowns=0;locus=RLOC_00020479
Chr2	stalkie_big_nohaplotig	exon	110290550	110290698	98	-	.	Parent=comp154913_c1_seq1.mrna1;Target=comp154913_c1_seq1 179 327 -
Chr2	stalkie_big_nohaplotig	exon	110291295	110292710	99	-	.	Parent=comp154913_c1_seq1.mrna1;Target=comp154913_c1_seq1 328 1747 -
Chr2	stalkie_big_nohaplotig	exon	110293722	110293739	100	-	.	Parent=comp154913_c1_seq1.mrna1;Target=comp154913_c1_seq1 1748 1765 -
Chr2	stalkie_big_nohaplotig	exon	110297013	110297276	100	-	.	Parent=comp154913_c1_seq1.mrna1;Target=comp154913_c1_seq1 1766 2029 -
Chr2	stalkie_big_nohaplotig	exon	110299856	110299888	100	-	.	Parent=comp154913_c1_seq1.mrna1;Target=comp154913_c1_seq1 2030 2062 -
Chr2	stalkie_big_nohaplotig	exon	110300111	110300241	100	-	.	Parent=comp154913_c1_seq1.mrna1;Target=comp154913_c1_seq1 2063 2193 -
Chr2	stalkie_big_nohaplotig	exon	110376277	110376650	100	-	.	Parent=comp154913_c1_seq1.mrna1;Target=comp154913_c1_seq1 2194 2567 -
Chr2	stalkie_big_nohaplotig	CDS	110292580	110292710	.	-	2	Parent=comp154913_c1_seq1.mrna1;Target=comp154913_c1_seq1 1617 1747 .
Chr2	stalkie_big_nohaplotig	CDS	110293722	110293739	.	-	2	Parent=comp154913_c1_seq1.mrna1;Target=comp154913_c1_seq1 1748 1765 .
Chr2	stalkie_big_nohaplotig	CDS	110297013	110297276	.	-	2	Parent=comp154913_c1_seq1.mrna1;Target=comp154913_c1_seq1 1766 2029 .
Chr2	stalkie_big_nohaplotig	CDS	110299856	110299888	.	-	2	Parent=comp154913_c1_seq1.mrna1;Target=comp154913_c1_seq1 2030 2062 .
Chr2	stalkie_big_nohaplotig	CDS	110300111	110300241	.	-	1	Parent=comp154913_c1_seq1.mrna1;Target=comp154913_c1_seq1 2063 2193 .
Chr2	stalkie_big_nohaplotig	CDS	110376277	110376323	.	-	0	Parent=comp154913_c1_seq1.mrna1;Target=comp154913_c1_seq1 2194 2240 .
Chr2	stalkie_big_nohaplotig	mRNA	110292583	110300241	.	-	.	ID=FBgn0051363.1.mrna1;geneID=FBgn0051363.1.path1;Name=FBgn0051363.1;Dir=sensecoverage=91.3;identity=100.0;matches=556;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020479
Chr2	stalkie_big_nohaplotig	exon	110292583	110292710	100	-	.	Parent=FBgn0051363.1.mrna1;Target=FBgn0051363.1 482 609 +
Chr2	stalkie_big_nohaplotig	exon	110297013	110297276	100	-	.	Parent=FBgn0051363.1.mrna1;Target=FBgn0051363.1 218 481 +
Chr2	stalkie_big_nohaplotig	exon	110299856	110299888	100	-	.	Parent=FBgn0051363.1.mrna1;Target=FBgn0051363.1 185 217 +
Chr2	stalkie_big_nohaplotig	exon	110300111	110300241	100	-	.	Parent=FBgn0051363.1.mrna1;Target=FBgn0051363.1 54 184 +
Chr2	stalkie_big_nohaplotig	CDS	110292583	110292710	.	-	2	Parent=FBgn0051363.1.mrna1;Target=FBgn0051363.1 482 609 +
Chr2	stalkie_big_nohaplotig	CDS	110297013	110297276	.	-	2	Parent=FBgn0051363.1.mrna1;Target=FBgn0051363.1 218 481 +
Chr2	stalkie_big_nohaplotig	CDS	110299856	110299888	.	-	2	Parent=FBgn0051363.1.mrna1;Target=FBgn0051363.1 185 217 +
Chr2	stalkie_big_nohaplotig	CDS	110300111	110300240	.	-	0	Parent=FBgn0051363.1.mrna1;Target=FBgn0051363.1 55 184 +
Chr2	gffcl	locus	110294163	110295575	.	-	.	ID=RLOC_00020480;geneIDs=comp154585_c0_seq1.path1;transcripts=comp154585_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110294163	110295575	.	-	.	ID=comp154585_c0_seq1.mrna1;geneID=comp154585_c0_seq1.path1;Name=comp154585_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1413;mismatches=0;indels=1;unknowns=0;Target=comp154585_c0_seq1 1414 1 .;CDS_Target=comp154585_c0_seq1 650 318 .;locus=RLOC_00020480
Chr2	stalkie_big_nohaplotig	exon	110294163	110295575	99	-	.	Parent=comp154585_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110294927	110295259	.	-	0	Parent=comp154585_c0_seq1.mrna1
Chr2	gffcl	locus	110296276	110296491	.	+	.	ID=RLOC_00020481;geneIDs=comp143435_c0_seq1.path1;transcripts=comp143435_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110296276	110296491	.	+	.	ID=comp143435_c0_seq1.mrna1;geneID=comp143435_c0_seq1.path1;Name=comp143435_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=216;mismatches=0;indels=0;unknowns=0;Target=comp143435_c0_seq1 216 1 .;CDS_Target=comp143435_c0_seq1 210 109 .;locus=RLOC_00020481
Chr2	stalkie_big_nohaplotig	exon	110296276	110296491	100	+	.	Parent=comp143435_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110296384	110296485	.	+	0	Parent=comp143435_c0_seq1.mrna1
Chr2	gffcl	locus	110328565	110329569	.	-	.	ID=RLOC_00020482;geneIDs=comp47675_c0_seq1.path1;transcripts=comp47675_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110328565	110329569	.	-	.	ID=comp47675_c0_seq1.mrna1;geneID=comp47675_c0_seq1.path1;Name=comp47675_c0_seq1;Dir=antisensecoverage=86.5;identity=99.6;matches=237;mismatches=1;indels=0;unknowns=0;Target=comp47675_c0_seq1 27 86 .;locus=RLOC_00020482
Chr2	stalkie_big_nohaplotig	exon	110328565	110328705	100	-	.	Parent=comp47675_c0_seq1.mrna1;Target=comp47675_c0_seq1 25 165 -
Chr2	stalkie_big_nohaplotig	exon	110329473	110329569	98	-	.	Parent=comp47675_c0_seq1.mrna1;Target=comp47675_c0_seq1 166 262 -
Chr2	stalkie_big_nohaplotig	CDS	110328567	110328626	.	-	0	Parent=comp47675_c0_seq1.mrna1
Chr2	gffcl	locus	110375150	110375437	.	-	.	ID=RLOC_00020483;geneIDs=comp145443_c0_seq1.path1;transcripts=comp145443_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110375150	110375437	.	-	.	ID=comp145443_c0_seq1.mrna1;geneID=comp145443_c0_seq1.path1;Name=comp145443_c0_seq1;Dir=indeterminatecoverage=99.3;identity=100.0;matches=288;mismatches=0;indels=0;unknowns=0;Target=comp145443_c0_seq1 288 1 .;CDS_Target=comp145443_c0_seq1 256 194 .;locus=RLOC_00020483
Chr2	stalkie_big_nohaplotig	exon	110375150	110375437	100	-	.	Parent=comp145443_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110375182	110375244	.	-	0	Parent=comp145443_c0_seq1.mrna1
Chr2	gffcl	locus	110378007	110379503	.	+	.	ID=RLOC_00020484;geneIDs=FBgn0038546.1.path1;transcripts=FBgn0038546.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110378007	110379503	.	+	.	ID=FBgn0038546.1.mrna1;geneID=FBgn0038546.1.path1;Name=FBgn0038546.1;Dir=sensecoverage=100.0;identity=100.0;matches=1311;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020484
Chr2	stalkie_big_nohaplotig	exon	110378007	110378181	100	+	.	Parent=FBgn0038546.1.mrna1;Target=FBgn0038546.1 1 175 +
Chr2	stalkie_big_nohaplotig	exon	110378296	110379227	100	+	.	Parent=FBgn0038546.1.mrna1;Target=FBgn0038546.1 176 1107 +
Chr2	stalkie_big_nohaplotig	exon	110379300	110379503	100	+	.	Parent=FBgn0038546.1.mrna1;Target=FBgn0038546.1 1108 1311 +
Chr2	stalkie_big_nohaplotig	CDS	110378007	110378181	.	+	0	Parent=FBgn0038546.1.mrna1;Target=FBgn0038546.1 1 175 +
Chr2	stalkie_big_nohaplotig	CDS	110378296	110379227	.	+	2	Parent=FBgn0038546.1.mrna1;Target=FBgn0038546.1 176 1107 +
Chr2	stalkie_big_nohaplotig	CDS	110379300	110379503	.	+	0	Parent=FBgn0038546.1.mrna1;Target=FBgn0038546.1 1108 1311 +
Chr2	gffcl	locus	110384420	110385707	.	-	.	ID=RLOC_00020485;geneIDs=FBgn0039740.3.path1;transcripts=FBgn0039740.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110384420	110385707	.	-	.	ID=FBgn0039740.3.mrna1;geneID=FBgn0039740.3.path1;Name=FBgn0039740.3;Dir=sensecoverage=100.0;identity=97.6;matches=1197;mismatches=30;indels=0;unknowns=0;locus=RLOC_00020485
Chr2	stalkie_big_nohaplotig	exon	110384420	110385159	98	-	.	Parent=FBgn0039740.3.mrna1;Target=FBgn0039740.3 488 1227 +
Chr2	stalkie_big_nohaplotig	exon	110385221	110385707	96	-	.	Parent=FBgn0039740.3.mrna1;Target=FBgn0039740.3 1 487 +
Chr2	stalkie_big_nohaplotig	CDS	110384420	110385159	.	-	2	Parent=FBgn0039740.3.mrna1;Target=FBgn0039740.3 488 1227 +
Chr2	stalkie_big_nohaplotig	CDS	110385221	110385617	.	-	0	Parent=FBgn0039740.3.mrna1;Target=FBgn0039740.3 91 487 +
Chr2	gffcl	locus	110387485	110388805	.	-	.	ID=RLOC_00020486;geneIDs=FBgn0039740.2.path1;transcripts=FBgn0039740.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110387485	110388805	.	-	.	ID=FBgn0039740.2.mrna1;geneID=FBgn0039740.2.path1;Name=FBgn0039740.2;Dir=sensecoverage=100.0;identity=99.4;matches=1244;mismatches=7;indels=0;unknowns=0;locus=RLOC_00020486
Chr2	stalkie_big_nohaplotig	exon	110387485	110388257	99	-	.	Parent=FBgn0039740.2.mrna1;Target=FBgn0039740.2 479 1251 +
Chr2	stalkie_big_nohaplotig	exon	110388328	110388805	99	-	.	Parent=FBgn0039740.2.mrna1;Target=FBgn0039740.2 1 478 +
Chr2	stalkie_big_nohaplotig	CDS	110387485	110388257	.	-	2	Parent=FBgn0039740.2.mrna1;Target=FBgn0039740.2 479 1251 +
Chr2	stalkie_big_nohaplotig	CDS	110388328	110388805	.	-	0	Parent=FBgn0039740.2.mrna1;Target=FBgn0039740.2 1 478 +
Chr2	gffcl	locus	110390621	110397249	.	-	.	ID=RLOC_00020487;geneIDs=ORF3205.path1;transcripts=ORF3205.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110390621	110397249	.	-	.	ID=ORF3205.mrna1;geneID=ORF3205.path1;Name=ORF3205;Dir=sensecoverage=100.0;identity=99.9;matches=755;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020487
Chr2	stalkie_big_nohaplotig	exon	110390621	110390834	100	-	.	Parent=ORF3205.mrna1;Target=ORF3205 543 756 +
Chr2	stalkie_big_nohaplotig	exon	110390900	110391051	100	-	.	Parent=ORF3205.mrna1;Target=ORF3205 391 542 +
Chr2	stalkie_big_nohaplotig	exon	110392316	110392468	99	-	.	Parent=ORF3205.mrna1;Target=ORF3205 238 390 +
Chr2	stalkie_big_nohaplotig	exon	110392533	110392647	100	-	.	Parent=ORF3205.mrna1;Target=ORF3205 123 237 +
Chr2	stalkie_big_nohaplotig	exon	110397128	110397249	100	-	.	Parent=ORF3205.mrna1;Target=ORF3205 1 122 +
Chr2	stalkie_big_nohaplotig	CDS	110390621	110390834	.	-	1	Parent=ORF3205.mrna1;Target=ORF3205 543 756 +
Chr2	stalkie_big_nohaplotig	CDS	110390900	110391051	.	-	0	Parent=ORF3205.mrna1;Target=ORF3205 391 542 +
Chr2	stalkie_big_nohaplotig	CDS	110392316	110392468	.	-	0	Parent=ORF3205.mrna1;Target=ORF3205 238 390 +
Chr2	stalkie_big_nohaplotig	CDS	110392533	110392647	.	-	1	Parent=ORF3205.mrna1;Target=ORF3205 123 237 +
Chr2	stalkie_big_nohaplotig	CDS	110397128	110397249	.	-	0	Parent=ORF3205.mrna1;Target=ORF3205 1 122 +
Chr2	gffcl	locus	110399182	110408937	.	-	.	ID=RLOC_00020488;geneIDs=FBgn0013812.path1;transcripts=FBgn0013812.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110399182	110408937	.	-	.	ID=FBgn0013812.mrna1;geneID=FBgn0013812.path1;Name=FBgn0013812;Dir=sensecoverage=99.9;identity=99.6;matches=6030;mismatches=23;indels=0;unknowns=0;locus=RLOC_00020488
Chr2	stalkie_big_nohaplotig	exon	110399182	110399340	100	-	.	Parent=FBgn0013812.mrna1;Target=FBgn0013812 5899 6057 +
Chr2	stalkie_big_nohaplotig	exon	110399684	110399816	100	-	.	Parent=FBgn0013812.mrna1;Target=FBgn0013812 5766 5898 +
Chr2	stalkie_big_nohaplotig	exon	110401047	110401195	100	-	.	Parent=FBgn0013812.mrna1;Target=FBgn0013812 5617 5765 +
Chr2	stalkie_big_nohaplotig	exon	110401269	110402270	99	-	.	Parent=FBgn0013812.mrna1;Target=FBgn0013812 4615 5616 +
Chr2	stalkie_big_nohaplotig	exon	110402340	110402754	100	-	.	Parent=FBgn0013812.mrna1;Target=FBgn0013812 4200 4614 +
Chr2	stalkie_big_nohaplotig	exon	110402818	110403134	100	-	.	Parent=FBgn0013812.mrna1;Target=FBgn0013812 3883 4199 +
Chr2	stalkie_big_nohaplotig	exon	110403184	110403354	100	-	.	Parent=FBgn0013812.mrna1;Target=FBgn0013812 3712 3882 +
Chr2	stalkie_big_nohaplotig	exon	110403413	110403553	100	-	.	Parent=FBgn0013812.mrna1;Target=FBgn0013812 3571 3711 +
Chr2	stalkie_big_nohaplotig	exon	110403611	110403775	98	-	.	Parent=FBgn0013812.mrna1;Target=FBgn0013812 3406 3570 +
Chr2	stalkie_big_nohaplotig	exon	110403840	110404044	98	-	.	Parent=FBgn0013812.mrna1;Target=FBgn0013812 3201 3405 +
Chr2	stalkie_big_nohaplotig	exon	110404104	110404297	100	-	.	Parent=FBgn0013812.mrna1;Target=FBgn0013812 3007 3200 +
Chr2	stalkie_big_nohaplotig	exon	110404360	110404663	100	-	.	Parent=FBgn0013812.mrna1;Target=FBgn0013812 2703 3006 +
Chr2	stalkie_big_nohaplotig	exon	110404721	110404890	100	-	.	Parent=FBgn0013812.mrna1;Target=FBgn0013812 2533 2702 +
Chr2	stalkie_big_nohaplotig	exon	110404960	110406309	99	-	.	Parent=FBgn0013812.mrna1;Target=FBgn0013812 1183 2532 +
Chr2	stalkie_big_nohaplotig	exon	110407636	110407792	99	-	.	Parent=FBgn0013812.mrna1;Target=FBgn0013812 1026 1182 +
Chr2	stalkie_big_nohaplotig	exon	110407862	110408223	99	-	.	Parent=FBgn0013812.mrna1;Target=FBgn0013812 664 1025 +
Chr2	stalkie_big_nohaplotig	exon	110408279	110408937	99	-	.	Parent=FBgn0013812.mrna1;Target=FBgn0013812 5 663 +
Chr2	stalkie_big_nohaplotig	CDS	110399182	110399340	.	-	0	Parent=FBgn0013812.mrna1;Target=FBgn0013812 5899 6057 +
Chr2	stalkie_big_nohaplotig	CDS	110399684	110399816	.	-	1	Parent=FBgn0013812.mrna1;Target=FBgn0013812 5766 5898 +
Chr2	stalkie_big_nohaplotig	CDS	110401047	110401195	.	-	0	Parent=FBgn0013812.mrna1;Target=FBgn0013812 5617 5765 +
Chr2	stalkie_big_nohaplotig	CDS	110401269	110402270	.	-	0	Parent=FBgn0013812.mrna1;Target=FBgn0013812 4615 5616 +
Chr2	stalkie_big_nohaplotig	CDS	110402340	110402754	.	-	1	Parent=FBgn0013812.mrna1;Target=FBgn0013812 4200 4614 +
Chr2	stalkie_big_nohaplotig	CDS	110402818	110403134	.	-	0	Parent=FBgn0013812.mrna1;Target=FBgn0013812 3883 4199 +
Chr2	stalkie_big_nohaplotig	CDS	110403184	110403354	.	-	0	Parent=FBgn0013812.mrna1;Target=FBgn0013812 3712 3882 +
Chr2	stalkie_big_nohaplotig	CDS	110403413	110403553	.	-	0	Parent=FBgn0013812.mrna1;Target=FBgn0013812 3571 3711 +
Chr2	stalkie_big_nohaplotig	CDS	110403611	110403775	.	-	0	Parent=FBgn0013812.mrna1;Target=FBgn0013812 3406 3570 +
Chr2	stalkie_big_nohaplotig	CDS	110403840	110404044	.	-	1	Parent=FBgn0013812.mrna1;Target=FBgn0013812 3201 3405 +
Chr2	stalkie_big_nohaplotig	CDS	110404104	110404297	.	-	0	Parent=FBgn0013812.mrna1;Target=FBgn0013812 3007 3200 +
Chr2	stalkie_big_nohaplotig	CDS	110404360	110404663	.	-	1	Parent=FBgn0013812.mrna1;Target=FBgn0013812 2703 3006 +
Chr2	stalkie_big_nohaplotig	CDS	110404721	110404890	.	-	0	Parent=FBgn0013812.mrna1;Target=FBgn0013812 2533 2702 +
Chr2	stalkie_big_nohaplotig	CDS	110404960	110406309	.	-	0	Parent=FBgn0013812.mrna1;Target=FBgn0013812 1183 2532 +
Chr2	stalkie_big_nohaplotig	CDS	110407636	110407792	.	-	1	Parent=FBgn0013812.mrna1;Target=FBgn0013812 1026 1182 +
Chr2	stalkie_big_nohaplotig	CDS	110407862	110408223	.	-	0	Parent=FBgn0013812.mrna1;Target=FBgn0013812 664 1025 +
Chr2	stalkie_big_nohaplotig	CDS	110408279	110408935	.	-	0	Parent=FBgn0013812.mrna1;Target=FBgn0013812 7 663 +
Chr2	gffcl	locus	110417899	110422162	.	-	.	ID=RLOC_00020489;geneIDs=comp149604_c0_seq1.path1;transcripts=comp149604_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110417899	110422162	.	-	.	ID=comp149604_c0_seq1.mrna1;geneID=comp149604_c0_seq1.path1;Name=comp149604_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=1319;mismatches=5;indels=0;unknowns=0;locus=RLOC_00020489
Chr2	stalkie_big_nohaplotig	exon	110417899	110418143	100	-	.	Parent=comp149604_c0_seq1.mrna1;Target=comp149604_c0_seq1 1080 1324 +
Chr2	stalkie_big_nohaplotig	exon	110418205	110418416	99	-	.	Parent=comp149604_c0_seq1.mrna1;Target=comp149604_c0_seq1 868 1079 +
Chr2	stalkie_big_nohaplotig	exon	110418491	110418643	100	-	.	Parent=comp149604_c0_seq1.mrna1;Target=comp149604_c0_seq1 715 867 +
Chr2	stalkie_big_nohaplotig	exon	110421449	110422162	99	-	.	Parent=comp149604_c0_seq1.mrna1;Target=comp149604_c0_seq1 1 714 +
Chr2	stalkie_big_nohaplotig	CDS	110418370	110418416	.	-	2	Parent=comp149604_c0_seq1.mrna1;Target=comp149604_c0_seq1 868 914 +
Chr2	stalkie_big_nohaplotig	CDS	110418491	110418643	.	-	2	Parent=comp149604_c0_seq1.mrna1;Target=comp149604_c0_seq1 715 867 +
Chr2	stalkie_big_nohaplotig	CDS	110421449	110422160	.	-	0	Parent=comp149604_c0_seq1.mrna1;Target=comp149604_c0_seq1 3 714 +
Chr2	gffcl	locus	110456427	110465319	.	+	.	ID=RLOC_00020490;geneIDs=FBgn0259821.1.path1;transcripts=FBgn0259821.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110456427	110465319	.	+	.	ID=FBgn0259821.1.mrna1;geneID=FBgn0259821.1.path1;Name=FBgn0259821.1;Dir=sensecoverage=100.0;identity=100.0;matches=2301;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020490
Chr2	stalkie_big_nohaplotig	exon	110456427	110456622	100	+	.	Parent=FBgn0259821.1.mrna1;Target=FBgn0259821.1 1 196 +
Chr2	stalkie_big_nohaplotig	exon	110459198	110459326	100	+	.	Parent=FBgn0259821.1.mrna1;Target=FBgn0259821.1 197 325 +
Chr2	stalkie_big_nohaplotig	exon	110460225	110460496	100	+	.	Parent=FBgn0259821.1.mrna1;Target=FBgn0259821.1 326 597 +
Chr2	stalkie_big_nohaplotig	exon	110461507	110461726	100	+	.	Parent=FBgn0259821.1.mrna1;Target=FBgn0259821.1 598 817 +
Chr2	stalkie_big_nohaplotig	exon	110462493	110462642	100	+	.	Parent=FBgn0259821.1.mrna1;Target=FBgn0259821.1 818 967 +
Chr2	stalkie_big_nohaplotig	exon	110462743	110462886	100	+	.	Parent=FBgn0259821.1.mrna1;Target=FBgn0259821.1 968 1111 +
Chr2	stalkie_big_nohaplotig	exon	110462961	110463245	100	+	.	Parent=FBgn0259821.1.mrna1;Target=FBgn0259821.1 1112 1396 +
Chr2	stalkie_big_nohaplotig	exon	110463938	110464209	100	+	.	Parent=FBgn0259821.1.mrna1;Target=FBgn0259821.1 1397 1668 +
Chr2	stalkie_big_nohaplotig	exon	110464409	110464712	100	+	.	Parent=FBgn0259821.1.mrna1;Target=FBgn0259821.1 1669 1972 +
Chr2	stalkie_big_nohaplotig	exon	110464991	110465319	100	+	.	Parent=FBgn0259821.1.mrna1;Target=FBgn0259821.1 1973 2301 +
Chr2	stalkie_big_nohaplotig	CDS	110456427	110456622	.	+	0	Parent=FBgn0259821.1.mrna1;Target=FBgn0259821.1 1 196 +
Chr2	stalkie_big_nohaplotig	CDS	110459198	110459326	.	+	2	Parent=FBgn0259821.1.mrna1;Target=FBgn0259821.1 197 325 +
Chr2	stalkie_big_nohaplotig	CDS	110460225	110460496	.	+	2	Parent=FBgn0259821.1.mrna1;Target=FBgn0259821.1 326 597 +
Chr2	stalkie_big_nohaplotig	CDS	110461507	110461726	.	+	0	Parent=FBgn0259821.1.mrna1;Target=FBgn0259821.1 598 817 +
Chr2	stalkie_big_nohaplotig	CDS	110462493	110462642	.	+	2	Parent=FBgn0259821.1.mrna1;Target=FBgn0259821.1 818 967 +
Chr2	stalkie_big_nohaplotig	CDS	110462743	110462886	.	+	2	Parent=FBgn0259821.1.mrna1;Target=FBgn0259821.1 968 1111 +
Chr2	stalkie_big_nohaplotig	CDS	110462961	110463245	.	+	2	Parent=FBgn0259821.1.mrna1;Target=FBgn0259821.1 1112 1396 +
Chr2	stalkie_big_nohaplotig	CDS	110463938	110464209	.	+	2	Parent=FBgn0259821.1.mrna1;Target=FBgn0259821.1 1397 1668 +
Chr2	stalkie_big_nohaplotig	CDS	110464409	110464712	.	+	0	Parent=FBgn0259821.1.mrna1;Target=FBgn0259821.1 1669 1972 +
Chr2	stalkie_big_nohaplotig	CDS	110464991	110465319	.	+	2	Parent=FBgn0259821.1.mrna1;Target=FBgn0259821.1 1973 2301 +
Chr2	gffcl	locus	110467271	110559923	.	-	.	ID=RLOC_00020491;geneIDs=comp160163_c0_seq1.path1,comp162974_c2_seq1.path1;transcripts=comp162974_c2_seq1.mrna1,comp160163_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110467271	110559923	.	-	.	ID=comp162974_c2_seq1.mrna1;geneID=comp162974_c2_seq1.path1;Name=comp162974_c2_seq1;Dir=indeterminatecoverage=56.5;identity=95.6;matches=915;mismatches=22;indels=20;unknowns=0;locus=RLOC_00020491
Chr2	stalkie_big_nohaplotig	exon	110467271	110468103	99	-	.	Parent=comp162974_c2_seq1.mrna1;Target=comp162974_c2_seq1 1478 647 .
Chr2	stalkie_big_nohaplotig	exon	110545606	110545639	91	-	.	Parent=comp162974_c2_seq1.mrna1;Target=comp162974_c2_seq1 646 613 .
Chr2	stalkie_big_nohaplotig	exon	110554211	110554214	100	-	.	Parent=comp162974_c2_seq1.mrna1;Target=comp162974_c2_seq1 612 609 .
Chr2	stalkie_big_nohaplotig	exon	110555807	110555844	56	-	.	Parent=comp162974_c2_seq1.mrna1;Target=comp162974_c2_seq1 608 561 .
Chr2	stalkie_big_nohaplotig	exon	110558900	110558921	62	-	.	Parent=comp162974_c2_seq1.mrna1;Target=comp162974_c2_seq1 560 534 .
Chr2	stalkie_big_nohaplotig	exon	110559915	110559923	100	-	.	Parent=comp162974_c2_seq1.mrna1;Target=comp162974_c2_seq1 533 525 .
Chr2	stalkie_big_nohaplotig	CDS	110558904	110558921	.	-	2	Parent=comp162974_c2_seq1.mrna1;Target=comp162974_c2_seq1 556 534 .
Chr2	stalkie_big_nohaplotig	CDS	110559915	110559921	.	-	0	Parent=comp162974_c2_seq1.mrna1;Target=comp162974_c2_seq1 533 527 .
Chr2	stalkie_big_nohaplotig	mRNA	110468069	110469394	.	-	.	ID=comp160163_c0_seq1.mrna1;geneID=comp160163_c0_seq1.path1;Name=comp160163_c0_seq1;Dir=indeterminatecoverage=98.2;identity=96.1;matches=1275;mismatches=12;indels=40;unknowns=0;Target=comp160163_c0_seq1 1311 24 .;CDS_Target=comp160163_c0_seq1 312 76 .;locus=RLOC_00020491
Chr2	stalkie_big_nohaplotig	exon	110468069	110469394	96	-	.	Parent=comp160163_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110469068	110469342	.	-	0	Parent=comp160163_c0_seq1.mrna1
Chr2	gffcl	locus	110471120	110471496	.	-	.	ID=RLOC_00020492;geneIDs=comp144990_c1_seq1.path2;transcripts=comp144990_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	110471120	110471496	.	-	.	ID=comp144990_c1_seq1.mrna2;geneID=comp144990_c1_seq1.path2;Name=comp144990_c1_seq1;Dir=antisensecoverage=64.0;identity=100.0;matches=307;mismatches=0;indels=0;unknowns=0;Target=comp144990_c1_seq1 174 294 .;locus=RLOC_00020492
Chr2	stalkie_big_nohaplotig	exon	110471120	110471300	100	-	.	Parent=comp144990_c1_seq1.mrna2;Target=comp144990_c1_seq1 174 354 -
Chr2	stalkie_big_nohaplotig	exon	110471371	110471496	100	-	.	Parent=comp144990_c1_seq1.mrna2;Target=comp144990_c1_seq1 355 480 -
Chr2	stalkie_big_nohaplotig	CDS	110471120	110471240	.	-	2	Parent=comp144990_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	110484452	110484900	.	+	.	ID=comp118710_c1_seq1.mrna1;geneID=comp118710_c1_seq1.path1;Name=comp118710_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=447;mismatches=2;indels=1;unknowns=0;Target=comp118710_c1_seq1 450 1 .;CDS_Target=comp118710_c1_seq1 135 1 .;locus=RLOC_00020493
Chr2	stalkie_big_nohaplotig	exon	110484452	110484900	99	+	.	Parent=comp118710_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110484452	110484586	.	+	0	Parent=comp118710_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110485217	110487021	.	+	.	ID=comp155691_c0_seq1.mrna1;geneID=comp155691_c0_seq1.path1;Name=comp155691_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1805;mismatches=0;indels=0;unknowns=0;Target=comp155691_c0_seq1 1805 1 .;CDS_Target=comp155691_c0_seq1 1716 1594 .;locus=RLOC_00020493
Chr2	stalkie_big_nohaplotig	exon	110485217	110487021	100	+	.	Parent=comp155691_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110486810	110486932	.	+	0	Parent=comp155691_c0_seq1.mrna1
Chr2	gffcl	locus	110487270	110488458	.	+	.	ID=RLOC_00020494;geneIDs=comp146290_c0_seq1.path1,comp147400_c0_seq1.path1;transcripts=comp146290_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110488159	110488458	.	+	.	ID=comp146290_c0_seq1.mrna1;geneID=comp146290_c0_seq1.path1;Name=comp146290_c0_seq1;Dir=indeterminatecoverage=93.4;identity=88.5;matches=255;mismatches=22;indels=11;unknowns=0;locus=RLOC_00020494
Chr2	stalkie_big_nohaplotig	exon	110488159	110488202	97	+	.	Parent=comp146290_c0_seq1.mrna1;Target=comp146290_c0_seq1 65 22 .
Chr2	stalkie_big_nohaplotig	exon	110488226	110488458	86	+	.	Parent=comp146290_c0_seq1.mrna1;Target=comp146290_c0_seq1 316 73 .
Chr2	stalkie_big_nohaplotig	CDS	110488176	110488202	.	+	0	Parent=comp146290_c0_seq1.mrna1;Target=comp146290_c0_seq1 65 39 .
Chr2	stalkie_big_nohaplotig	CDS	110488226	110488227	.	+	0	Parent=comp146290_c0_seq1.mrna1;Target=comp146290_c0_seq1 74 73 .
Chr2	gffcl	locus	110503351	110507964	.	+	.	ID=RLOC_00020495;geneIDs=FBgn0016919.path1;transcripts=FBgn0016919.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110503351	110507964	.	+	.	ID=FBgn0016919.mrna1;geneID=FBgn0016919.path1;Name=FBgn0016919;Dir=sensecoverage=98.3;identity=99.9;matches=804;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020495
Chr2	stalkie_big_nohaplotig	exon	110503351	110503450	99	+	.	Parent=FBgn0016919.mrna1;Target=FBgn0016919 15 114 +
Chr2	stalkie_big_nohaplotig	exon	110507260	110507964	100	+	.	Parent=FBgn0016919.mrna1;Target=FBgn0016919 115 819 +
Chr2	stalkie_big_nohaplotig	CDS	110503352	110503450	.	+	0	Parent=FBgn0016919.mrna1;Target=FBgn0016919 16 114 +
Chr2	stalkie_big_nohaplotig	CDS	110507260	110507964	.	+	0	Parent=FBgn0016919.mrna1;Target=FBgn0016919 115 819 +
Chr2	gffcl	locus	110529224	110549130	.	+	.	ID=RLOC_00020496;geneIDs=FBgn0037213.1.path1;transcripts=FBgn0037213.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110529224	110549130	.	+	.	ID=FBgn0037213.1.mrna1;geneID=FBgn0037213.1.path1;Name=FBgn0037213.1;Dir=sensecoverage=100.0;identity=99.9;matches=1985;mismatches=0;indels=1;unknowns=0;Target=FBgn0037213.1 3 83 +;locus=RLOC_00020496
Chr2	stalkie_big_nohaplotig	exon	110529224	110530045	99	+	.	Parent=FBgn0037213.1.mrna1;Target=FBgn0037213.1 1 823 +
Chr2	stalkie_big_nohaplotig	exon	110547968	110549130	100	+	.	Parent=FBgn0037213.1.mrna1;Target=FBgn0037213.1 824 1986 +
Chr2	stalkie_big_nohaplotig	CDS	110529226	110529305	.	+	0	Parent=FBgn0037213.1.mrna1
Chr2	gffcl	locus	110557395	110558003	.	-	.	ID=RLOC_00020497;geneIDs=comp149576_c0_seq1.path1;transcripts=comp149576_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110557395	110558003	.	-	.	ID=comp149576_c0_seq1.mrna1;geneID=comp149576_c0_seq1.path1;Name=comp149576_c0_seq1;Dir=indeterminatecoverage=96.7;identity=99.8;matches=608;mismatches=1;indels=0;unknowns=0;Target=comp149576_c0_seq1 630 22 .;CDS_Target=comp149576_c0_seq1 303 22 .;locus=RLOC_00020497
Chr2	stalkie_big_nohaplotig	exon	110557395	110558003	99	-	.	Parent=comp149576_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110557722	110558003	.	-	0	Parent=comp149576_c0_seq1.mrna1
Chr2	gffcl	locus	110561564	110561977	.	-	.	ID=RLOC_00020498;geneIDs=Dv_FBgn0210281.1.path1;transcripts=Dv_FBgn0210281.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110561564	110561977	.	-	.	ID=Dv_FBgn0210281.1.mrna1;geneID=Dv_FBgn0210281.1.path1;Name=Dv_FBgn0210281.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=414;mismatches=0;indels=0;unknowns=0;Target=Dv_FBgn0210281.1 414 1 .;locus=RLOC_00020498
Chr2	stalkie_big_nohaplotig	exon	110561564	110561977	100	-	.	Parent=Dv_FBgn0210281.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110561564	110561977	.	-	0	Parent=Dv_FBgn0210281.1.mrna1
Chr2	gffcl	locus	110604575	110606118	.	+	.	ID=RLOC_00020499;geneIDs=FBgn0038074.1.path1;transcripts=FBgn0038074.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110604575	110606118	.	+	.	ID=FBgn0038074.1.mrna1;geneID=FBgn0038074.1.path1;Name=FBgn0038074.1;Dir=sensecoverage=100.0;identity=99.8;matches=886;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020499
Chr2	stalkie_big_nohaplotig	exon	110604575	110604816	100	+	.	Parent=FBgn0038074.1.mrna1;Target=FBgn0038074.1 1 242 +
Chr2	stalkie_big_nohaplotig	exon	110604888	110605015	100	+	.	Parent=FBgn0038074.1.mrna1;Target=FBgn0038074.1 243 370 +
Chr2	stalkie_big_nohaplotig	exon	110605083	110605339	99	+	.	Parent=FBgn0038074.1.mrna1;Target=FBgn0038074.1 371 627 +
Chr2	stalkie_big_nohaplotig	exon	110605858	110606118	99	+	.	Parent=FBgn0038074.1.mrna1;Target=FBgn0038074.1 628 888 +
Chr2	stalkie_big_nohaplotig	CDS	110604575	110604816	.	+	0	Parent=FBgn0038074.1.mrna1;Target=FBgn0038074.1 1 242 +
Chr2	stalkie_big_nohaplotig	CDS	110604888	110605015	.	+	1	Parent=FBgn0038074.1.mrna1;Target=FBgn0038074.1 243 370 +
Chr2	stalkie_big_nohaplotig	CDS	110605083	110605339	.	+	2	Parent=FBgn0038074.1.mrna1;Target=FBgn0038074.1 371 627 +
Chr2	stalkie_big_nohaplotig	CDS	110605858	110606118	.	+	0	Parent=FBgn0038074.1.mrna1;Target=FBgn0038074.1 628 888 +
Chr2	gffcl	locus	110606182	110606669	.	+	.	ID=RLOC_00020500;geneIDs=comp155040_c1_seq1.path1;transcripts=comp155040_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110606182	110606669	.	+	.	ID=comp155040_c1_seq1.mrna1;geneID=comp155040_c1_seq1.path1;Name=comp155040_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=488;mismatches=0;indels=10;unknowns=0;Target=comp155040_c1_seq1 498 1 .;CDS_Target=comp155040_c1_seq1 284 198 .;locus=RLOC_00020500
Chr2	stalkie_big_nohaplotig	exon	110606182	110606669	97	+	.	Parent=comp155040_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110606379	110606465	.	+	0	Parent=comp155040_c1_seq1.mrna1
Chr2	gffcl	locus	110608480	110613288	.	-	.	ID=RLOC_00020501;geneIDs=FBgn0038076.3.path1;transcripts=FBgn0038076.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110608480	110613288	.	-	.	ID=FBgn0038076.3.mrna1;geneID=FBgn0038076.3.path1;Name=FBgn0038076.3;Dir=sensecoverage=100.0;identity=100.0;matches=1485;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020501
Chr2	stalkie_big_nohaplotig	exon	110608480	110608640	100	-	.	Parent=FBgn0038076.3.mrna1;Target=FBgn0038076.3 1325 1485 +
Chr2	stalkie_big_nohaplotig	exon	110608701	110609127	100	-	.	Parent=FBgn0038076.3.mrna1;Target=FBgn0038076.3 898 1324 +
Chr2	stalkie_big_nohaplotig	exon	110609186	110609329	100	-	.	Parent=FBgn0038076.3.mrna1;Target=FBgn0038076.3 754 897 +
Chr2	stalkie_big_nohaplotig	exon	110609391	110609517	100	-	.	Parent=FBgn0038076.3.mrna1;Target=FBgn0038076.3 627 753 +
Chr2	stalkie_big_nohaplotig	exon	110609567	110609639	100	-	.	Parent=FBgn0038076.3.mrna1;Target=FBgn0038076.3 554 626 +
Chr2	stalkie_big_nohaplotig	exon	110609727	110609912	100	-	.	Parent=FBgn0038076.3.mrna1;Target=FBgn0038076.3 368 553 +
Chr2	stalkie_big_nohaplotig	exon	110609966	110610163	100	-	.	Parent=FBgn0038076.3.mrna1;Target=FBgn0038076.3 170 367 +
Chr2	stalkie_big_nohaplotig	exon	110613120	110613288	100	-	.	Parent=FBgn0038076.3.mrna1;Target=FBgn0038076.3 1 169 +
Chr2	stalkie_big_nohaplotig	CDS	110608480	110608640	.	-	2	Parent=FBgn0038076.3.mrna1;Target=FBgn0038076.3 1325 1485 +
Chr2	stalkie_big_nohaplotig	CDS	110608701	110609127	.	-	0	Parent=FBgn0038076.3.mrna1;Target=FBgn0038076.3 898 1324 +
Chr2	stalkie_big_nohaplotig	CDS	110609186	110609329	.	-	0	Parent=FBgn0038076.3.mrna1;Target=FBgn0038076.3 754 897 +
Chr2	stalkie_big_nohaplotig	CDS	110609391	110609517	.	-	1	Parent=FBgn0038076.3.mrna1;Target=FBgn0038076.3 627 753 +
Chr2	stalkie_big_nohaplotig	CDS	110609567	110609639	.	-	2	Parent=FBgn0038076.3.mrna1;Target=FBgn0038076.3 554 626 +
Chr2	stalkie_big_nohaplotig	CDS	110609727	110609912	.	-	2	Parent=FBgn0038076.3.mrna1;Target=FBgn0038076.3 368 553 +
Chr2	stalkie_big_nohaplotig	CDS	110609966	110610163	.	-	2	Parent=FBgn0038076.3.mrna1;Target=FBgn0038076.3 170 367 +
Chr2	stalkie_big_nohaplotig	CDS	110613120	110613288	.	-	0	Parent=FBgn0038076.3.mrna1;Target=FBgn0038076.3 1 169 +
Chr2	gffcl	locus	110617427	110617909	.	-	.	ID=RLOC_00020502;geneIDs=comp146906_c0_seq1.path1;transcripts=comp146906_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110617427	110617909	.	-	.	ID=comp146906_c0_seq1.mrna1;geneID=comp146906_c0_seq1.path1;Name=comp146906_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=482;mismatches=1;indels=0;unknowns=0;Target=comp146906_c0_seq1 483 1 .;CDS_Target=comp146906_c0_seq1 212 123 .;locus=RLOC_00020502
Chr2	stalkie_big_nohaplotig	exon	110617427	110617909	99	-	.	Parent=comp146906_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110617698	110617787	.	-	0	Parent=comp146906_c0_seq1.mrna1
Chr2	gffcl	locus	110618038	110643836	.	.	.	ID=RLOC_00020503;geneIDs=FBgn0005355.1.path1,comp150947_c1_seq1.path1;transcripts=comp150947_c1_seq1.mrna1,FBgn0005355.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110618038	110643836	.	-	.	ID=comp150947_c1_seq1.mrna1;geneID=comp150947_c1_seq1.path1;Name=comp150947_c1_seq1;Dir=indeterminatecoverage=85.6;identity=99.6;matches=510;mismatches=1;indels=1;unknowns=0;Target=comp150947_c1_seq1 596 561 .;locus=RLOC_00020503
Chr2	stalkie_big_nohaplotig	exon	110618038	110618534	99	-	.	Parent=comp150947_c1_seq1.mrna1;Target=comp150947_c1_seq1 598 101 .
Chr2	stalkie_big_nohaplotig	exon	110629779	110629784	100	-	.	Parent=comp150947_c1_seq1.mrna1;Target=comp150947_c1_seq1 100 95 .
Chr2	stalkie_big_nohaplotig	exon	110641958	110641959	100	-	.	Parent=comp150947_c1_seq1.mrna1;Target=comp150947_c1_seq1 94 93 .
Chr2	stalkie_big_nohaplotig	exon	110643831	110643836	100	-	.	Parent=comp150947_c1_seq1.mrna1;Target=comp150947_c1_seq1 92 87 .
Chr2	stalkie_big_nohaplotig	CDS	110618040	110618075	.	-	0	Parent=comp150947_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110641029	110642414	.	+	.	ID=FBgn0005355.1.mrna1;geneID=FBgn0005355.1.path1;Name=FBgn0005355.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1386;mismatches=0;indels=0;unknowns=0;Target=FBgn0005355.1 1386 1 .;locus=RLOC_00020503
Chr2	stalkie_big_nohaplotig	exon	110641029	110642414	100	+	.	Parent=FBgn0005355.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110641029	110642414	.	+	0	Parent=FBgn0005355.1.mrna1
Chr2	gffcl	locus	110643795	110646694	.	+	.	ID=RLOC_00020505;geneIDs=FBgn0011745.1.path1;transcripts=FBgn0011745.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110643795	110646694	.	+	.	ID=FBgn0011745.1.mrna1;geneID=FBgn0011745.1.path1;Name=FBgn0011745.1;Dir=sensecoverage=100.0;identity=100.0;matches=1164;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020505
Chr2	stalkie_big_nohaplotig	exon	110643795	110643878	100	+	.	Parent=FBgn0011745.1.mrna1;Target=FBgn0011745.1 1 84 +
Chr2	stalkie_big_nohaplotig	exon	110644757	110644821	100	+	.	Parent=FBgn0011745.1.mrna1;Target=FBgn0011745.1 85 149 +
Chr2	stalkie_big_nohaplotig	exon	110644883	110645057	100	+	.	Parent=FBgn0011745.1.mrna1;Target=FBgn0011745.1 150 324 +
Chr2	stalkie_big_nohaplotig	exon	110645663	110645814	100	+	.	Parent=FBgn0011745.1.mrna1;Target=FBgn0011745.1 325 476 +
Chr2	stalkie_big_nohaplotig	exon	110645886	110646195	100	+	.	Parent=FBgn0011745.1.mrna1;Target=FBgn0011745.1 477 786 +
Chr2	stalkie_big_nohaplotig	exon	110646260	110646496	100	+	.	Parent=FBgn0011745.1.mrna1;Target=FBgn0011745.1 787 1023 +
Chr2	stalkie_big_nohaplotig	exon	110646554	110646694	100	+	.	Parent=FBgn0011745.1.mrna1;Target=FBgn0011745.1 1024 1164 +
Chr2	stalkie_big_nohaplotig	CDS	110643795	110643878	.	+	0	Parent=FBgn0011745.1.mrna1;Target=FBgn0011745.1 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	110644757	110644821	.	+	0	Parent=FBgn0011745.1.mrna1;Target=FBgn0011745.1 85 149 +
Chr2	stalkie_big_nohaplotig	CDS	110644883	110645057	.	+	1	Parent=FBgn0011745.1.mrna1;Target=FBgn0011745.1 150 324 +
Chr2	stalkie_big_nohaplotig	CDS	110645663	110645814	.	+	0	Parent=FBgn0011745.1.mrna1;Target=FBgn0011745.1 325 476 +
Chr2	stalkie_big_nohaplotig	CDS	110645886	110646195	.	+	1	Parent=FBgn0011745.1.mrna1;Target=FBgn0011745.1 477 786 +
Chr2	stalkie_big_nohaplotig	CDS	110646260	110646496	.	+	0	Parent=FBgn0011745.1.mrna1;Target=FBgn0011745.1 787 1023 +
Chr2	stalkie_big_nohaplotig	CDS	110646554	110646694	.	+	0	Parent=FBgn0011745.1.mrna1;Target=FBgn0011745.1 1024 1164 +
Chr2	gffcl	locus	110647110	110647692	.	+	.	ID=RLOC_00020506;geneIDs=comp149417_c0_seq1.path1;transcripts=comp149417_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110647110	110647692	.	+	.	ID=comp149417_c0_seq1.mrna1;geneID=comp149417_c0_seq1.path1;Name=comp149417_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=581;mismatches=2;indels=0;unknowns=0;Target=comp149417_c0_seq1 583 1 .;CDS_Target=comp149417_c0_seq1 331 152 .;locus=RLOC_00020506
Chr2	stalkie_big_nohaplotig	exon	110647110	110647692	99	+	.	Parent=comp149417_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110647261	110647440	.	+	0	Parent=comp149417_c0_seq1.mrna1
Chr2	gffcl	locus	110649887	110655305	.	+	.	ID=RLOC_00020507;geneIDs=FBgn0038079.1.path1;transcripts=FBgn0038079.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110649887	110655305	.	+	.	ID=FBgn0038079.1.mrna1;geneID=FBgn0038079.1.path1;Name=FBgn0038079.1;Dir=sensecoverage=100.0;identity=100.0;matches=498;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020507
Chr2	stalkie_big_nohaplotig	exon	110649887	110650012	100	+	.	Parent=FBgn0038079.1.mrna1;Target=FBgn0038079.1 1 126 +
Chr2	stalkie_big_nohaplotig	exon	110654879	110655055	100	+	.	Parent=FBgn0038079.1.mrna1;Target=FBgn0038079.1 127 303 +
Chr2	stalkie_big_nohaplotig	exon	110655111	110655305	100	+	.	Parent=FBgn0038079.1.mrna1;Target=FBgn0038079.1 304 498 +
Chr2	stalkie_big_nohaplotig	CDS	110649887	110650012	.	+	0	Parent=FBgn0038079.1.mrna1;Target=FBgn0038079.1 1 126 +
Chr2	stalkie_big_nohaplotig	CDS	110654879	110655055	.	+	0	Parent=FBgn0038079.1.mrna1;Target=FBgn0038079.1 127 303 +
Chr2	stalkie_big_nohaplotig	CDS	110655111	110655305	.	+	0	Parent=FBgn0038079.1.mrna1;Target=FBgn0038079.1 304 498 +
Chr2	gffcl	locus	110656220	110656525	.	+	.	ID=RLOC_00020508;geneIDs=comp101043_c0_seq1.path1;transcripts=comp101043_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110656220	110656525	.	+	.	ID=comp101043_c0_seq1.mrna1;geneID=comp101043_c0_seq1.path1;Name=comp101043_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=306;mismatches=0;indels=0;unknowns=0;Target=comp101043_c0_seq1 307 2 .;CDS_Target=comp101043_c0_seq1 271 188 .;locus=RLOC_00020508
Chr2	stalkie_big_nohaplotig	exon	110656220	110656525	100	+	.	Parent=comp101043_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110656406	110656489	.	+	0	Parent=comp101043_c0_seq1.mrna1
Chr2	gffcl	locus	110684755	110688367	.	+	.	ID=RLOC_00020509;geneIDs=FBgn0026597.1.path1;transcripts=FBgn0026597.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110684755	110688367	.	+	.	ID=FBgn0026597.1.mrna1;geneID=FBgn0026597.1.path1;Name=FBgn0026597.1;Dir=sensecoverage=100.0;identity=100.0;matches=2226;mismatches=0;indels=0;unknowns=3;locus=RLOC_00020509
Chr2	stalkie_big_nohaplotig	exon	110684755	110684769	100	+	.	Parent=FBgn0026597.1.mrna1;Target=FBgn0026597.1 1 15 +
Chr2	stalkie_big_nohaplotig	exon	110684820	110684942	100	+	.	Parent=FBgn0026597.1.mrna1;Target=FBgn0026597.1 16 138 +
Chr2	stalkie_big_nohaplotig	exon	110685009	110685241	100	+	.	Parent=FBgn0026597.1.mrna1;Target=FBgn0026597.1 139 371 +
Chr2	stalkie_big_nohaplotig	exon	110685301	110685957	100	+	.	Parent=FBgn0026597.1.mrna1;Target=FBgn0026597.1 372 1028 +
Chr2	stalkie_big_nohaplotig	exon	110686416	110686550	100	+	.	Parent=FBgn0026597.1.mrna1;Target=FBgn0026597.1 1029 1163 +
Chr2	stalkie_big_nohaplotig	exon	110686665	110686761	100	+	.	Parent=FBgn0026597.1.mrna1;Target=FBgn0026597.1 1164 1260 +
Chr2	stalkie_big_nohaplotig	exon	110686823	110686957	100	+	.	Parent=FBgn0026597.1.mrna1;Target=FBgn0026597.1 1261 1395 +
Chr2	stalkie_big_nohaplotig	exon	110687019	110687259	100	+	.	Parent=FBgn0026597.1.mrna1;Target=FBgn0026597.1 1396 1636 +
Chr2	stalkie_big_nohaplotig	exon	110687332	110687476	100	+	.	Parent=FBgn0026597.1.mrna1;Target=FBgn0026597.1 1637 1781 +
Chr2	stalkie_big_nohaplotig	exon	110687854	110688177	100	+	.	Parent=FBgn0026597.1.mrna1;Target=FBgn0026597.1 1782 2105 +
Chr2	stalkie_big_nohaplotig	exon	110688244	110688367	100	+	.	Parent=FBgn0026597.1.mrna1;Target=FBgn0026597.1 2106 2229 +
Chr2	stalkie_big_nohaplotig	CDS	110684755	110684769	.	+	0	Parent=FBgn0026597.1.mrna1;Target=FBgn0026597.1 1 15 +
Chr2	stalkie_big_nohaplotig	CDS	110684820	110684942	.	+	0	Parent=FBgn0026597.1.mrna1;Target=FBgn0026597.1 16 138 +
Chr2	stalkie_big_nohaplotig	CDS	110685009	110685241	.	+	0	Parent=FBgn0026597.1.mrna1;Target=FBgn0026597.1 139 371 +
Chr2	stalkie_big_nohaplotig	CDS	110685301	110685957	.	+	1	Parent=FBgn0026597.1.mrna1;Target=FBgn0026597.1 372 1028 +
Chr2	stalkie_big_nohaplotig	CDS	110686416	110686550	.	+	1	Parent=FBgn0026597.1.mrna1;Target=FBgn0026597.1 1029 1163 +
Chr2	stalkie_big_nohaplotig	CDS	110686665	110686761	.	+	1	Parent=FBgn0026597.1.mrna1;Target=FBgn0026597.1 1164 1260 +
Chr2	stalkie_big_nohaplotig	CDS	110686823	110686957	.	+	0	Parent=FBgn0026597.1.mrna1;Target=FBgn0026597.1 1261 1395 +
Chr2	stalkie_big_nohaplotig	CDS	110687019	110687259	.	+	0	Parent=FBgn0026597.1.mrna1;Target=FBgn0026597.1 1396 1636 +
Chr2	stalkie_big_nohaplotig	CDS	110687332	110687476	.	+	2	Parent=FBgn0026597.1.mrna1;Target=FBgn0026597.1 1637 1781 +
Chr2	stalkie_big_nohaplotig	CDS	110687854	110688177	.	+	1	Parent=FBgn0026597.1.mrna1;Target=FBgn0026597.1 1782 2105 +
Chr2	stalkie_big_nohaplotig	CDS	110688244	110688367	.	+	1	Parent=FBgn0026597.1.mrna1;Target=FBgn0026597.1 2106 2229 +
Chr2	gffcl	locus	110688803	110689190	.	+	.	ID=RLOC_00020510;geneIDs=comp149315_c0_seq1.path1;transcripts=comp149315_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110688803	110689190	.	+	.	ID=comp149315_c0_seq1.mrna1;geneID=comp149315_c0_seq1.path1;Name=comp149315_c0_seq1;Dir=indeterminatecoverage=62.9;identity=100.0;matches=388;mismatches=0;indels=0;unknowns=0;Target=comp149315_c0_seq1 617 230 .;CDS_Target=comp149315_c0_seq1 301 230 .;locus=RLOC_00020510
Chr2	stalkie_big_nohaplotig	exon	110688803	110689190	100	+	.	Parent=comp149315_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110688803	110688874	.	+	0	Parent=comp149315_c0_seq1.mrna1
Chr2	gffcl	locus	110690776	110691202	.	-	.	ID=RLOC_00020511;geneIDs=FBgn0037773.1.path1;transcripts=FBgn0037773.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110690776	110691202	.	-	.	ID=FBgn0037773.1.mrna1;geneID=FBgn0037773.1.path1;Name=FBgn0037773.1;Dir=sensecoverage=100.0;identity=99.7;matches=374;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020511
Chr2	stalkie_big_nohaplotig	exon	110690776	110691032	99	-	.	Parent=FBgn0037773.1.mrna1;Target=FBgn0037773.1 119 375 +
Chr2	stalkie_big_nohaplotig	exon	110691085	110691202	100	-	.	Parent=FBgn0037773.1.mrna1;Target=FBgn0037773.1 1 118 +
Chr2	stalkie_big_nohaplotig	CDS	110690776	110691032	.	-	2	Parent=FBgn0037773.1.mrna1;Target=FBgn0037773.1 119 375 +
Chr2	stalkie_big_nohaplotig	CDS	110691085	110691202	.	-	0	Parent=FBgn0037773.1.mrna1;Target=FBgn0037773.1 1 118 +
Chr2	gffcl	locus	110710349	110710555	.	+	.	ID=RLOC_00020513;geneIDs=comp53625_c0_seq1.path1;transcripts=comp53625_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110710349	110710555	.	+	.	ID=comp53625_c0_seq1.mrna1;geneID=comp53625_c0_seq1.path1;Name=comp53625_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=207;mismatches=0;indels=0;unknowns=0;Target=comp53625_c0_seq1 207 1 .;CDS_Target=comp53625_c0_seq1 54 1 .;locus=RLOC_00020513
Chr2	stalkie_big_nohaplotig	exon	110710349	110710555	100	+	.	Parent=comp53625_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110710349	110710402	.	+	0	Parent=comp53625_c0_seq1.mrna1
Chr2	gffcl	locus	110712114	110713178	.	-	.	ID=RLOC_00020514;geneIDs=FBgn0038042.1.path1;transcripts=FBgn0038042.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110712114	110713178	.	-	.	ID=FBgn0038042.1.mrna1;geneID=FBgn0038042.1.path1;Name=FBgn0038042.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1065;mismatches=0;indels=0;unknowns=0;Target=FBgn0038042.1 1065 1 .;locus=RLOC_00020514
Chr2	stalkie_big_nohaplotig	exon	110712114	110713178	100	-	.	Parent=FBgn0038042.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110712114	110713178	.	-	0	Parent=FBgn0038042.1.mrna1
Chr2	gffcl	locus	110715377	110715892	.	+	.	ID=RLOC_00020515;geneIDs=Dp_FBgn0074414.1.path1;transcripts=Dp_FBgn0074414.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110715377	110715892	.	+	.	ID=Dp_FBgn0074414.1.mrna1;geneID=Dp_FBgn0074414.1.path1;Name=Dp_FBgn0074414.1;Dir=sensecoverage=100.0;identity=100.0;matches=456;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020515
Chr2	stalkie_big_nohaplotig	exon	110715377	110715418	100	+	.	Parent=Dp_FBgn0074414.1.mrna1;Target=Dp_FBgn0074414.1 1 42 +
Chr2	stalkie_big_nohaplotig	exon	110715479	110715892	100	+	.	Parent=Dp_FBgn0074414.1.mrna1;Target=Dp_FBgn0074414.1 43 456 +
Chr2	stalkie_big_nohaplotig	CDS	110715377	110715418	.	+	0	Parent=Dp_FBgn0074414.1.mrna1;Target=Dp_FBgn0074414.1 1 42 +
Chr2	stalkie_big_nohaplotig	CDS	110715479	110715892	.	+	0	Parent=Dp_FBgn0074414.1.mrna1;Target=Dp_FBgn0074414.1 43 456 +
Chr2	gffcl	locus	110718373	110719287	.	-	.	ID=RLOC_00020516;geneIDs=FBgn0003134.1.path1;transcripts=FBgn0003134.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110718373	110719287	.	-	.	ID=FBgn0003134.1.mrna1;geneID=FBgn0003134.1.path1;Name=FBgn0003134.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=915;mismatches=0;indels=0;unknowns=0;Target=FBgn0003134.1 915 1 .;locus=RLOC_00020516
Chr2	stalkie_big_nohaplotig	exon	110718373	110719287	100	-	.	Parent=FBgn0003134.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110718373	110719287	.	-	0	Parent=FBgn0003134.1.mrna1
Chr2	gffcl	locus	110720924	110722219	.	+	.	ID=RLOC_00020517;geneIDs=FBgn0038045.1.path1;transcripts=FBgn0038045.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110720924	110722219	.	+	.	ID=FBgn0038045.1.mrna1;geneID=FBgn0038045.1.path1;Name=FBgn0038045.1;Dir=sensecoverage=100.0;identity=100.0;matches=1149;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020517
Chr2	stalkie_big_nohaplotig	exon	110720924	110721058	100	+	.	Parent=FBgn0038045.1.mrna1;Target=FBgn0038045.1 1 135 +
Chr2	stalkie_big_nohaplotig	exon	110721112	110721327	100	+	.	Parent=FBgn0038045.1.mrna1;Target=FBgn0038045.1 136 351 +
Chr2	stalkie_big_nohaplotig	exon	110721422	110722219	100	+	.	Parent=FBgn0038045.1.mrna1;Target=FBgn0038045.1 352 1149 +
Chr2	stalkie_big_nohaplotig	CDS	110720924	110721058	.	+	0	Parent=FBgn0038045.1.mrna1;Target=FBgn0038045.1 1 135 +
Chr2	stalkie_big_nohaplotig	CDS	110721112	110721327	.	+	0	Parent=FBgn0038045.1.mrna1;Target=FBgn0038045.1 136 351 +
Chr2	stalkie_big_nohaplotig	CDS	110721422	110722219	.	+	0	Parent=FBgn0038045.1.mrna1;Target=FBgn0038045.1 352 1149 +
Chr2	gffcl	locus	110722461	110723828	.	-	.	ID=RLOC_00020518;geneIDs=FBgn0038046.1.path1;transcripts=FBgn0038046.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110722461	110723828	.	-	.	ID=FBgn0038046.1.mrna1;geneID=FBgn0038046.1.path1;Name=FBgn0038046.1;Dir=sensecoverage=100.0;identity=100.0;matches=1206;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020518
Chr2	stalkie_big_nohaplotig	exon	110722461	110723348	100	-	.	Parent=FBgn0038046.1.mrna1;Target=FBgn0038046.1 319 1206 +
Chr2	stalkie_big_nohaplotig	exon	110723400	110723528	100	-	.	Parent=FBgn0038046.1.mrna1;Target=FBgn0038046.1 190 318 +
Chr2	stalkie_big_nohaplotig	exon	110723582	110723608	100	-	.	Parent=FBgn0038046.1.mrna1;Target=FBgn0038046.1 163 189 +
Chr2	stalkie_big_nohaplotig	exon	110723667	110723828	100	-	.	Parent=FBgn0038046.1.mrna1;Target=FBgn0038046.1 1 162 +
Chr2	stalkie_big_nohaplotig	CDS	110722461	110723348	.	-	0	Parent=FBgn0038046.1.mrna1;Target=FBgn0038046.1 319 1206 +
Chr2	stalkie_big_nohaplotig	CDS	110723400	110723528	.	-	0	Parent=FBgn0038046.1.mrna1;Target=FBgn0038046.1 190 318 +
Chr2	stalkie_big_nohaplotig	CDS	110723582	110723608	.	-	0	Parent=FBgn0038046.1.mrna1;Target=FBgn0038046.1 163 189 +
Chr2	stalkie_big_nohaplotig	CDS	110723667	110723828	.	-	0	Parent=FBgn0038046.1.mrna1;Target=FBgn0038046.1 1 162 +
Chr2	gffcl	locus	110724965	110726095	.	+	.	ID=RLOC_00020519;geneIDs=FBgn0029512.1.path1;transcripts=FBgn0029512.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110724965	110726095	.	+	.	ID=FBgn0029512.1.mrna1;geneID=FBgn0029512.1.path1;Name=FBgn0029512.1;Dir=sensecoverage=100.0;identity=100.0;matches=1014;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020519
Chr2	stalkie_big_nohaplotig	exon	110724965	110725074	100	+	.	Parent=FBgn0029512.1.mrna1;Target=FBgn0029512.1 1 110 +
Chr2	stalkie_big_nohaplotig	exon	110725139	110725567	100	+	.	Parent=FBgn0029512.1.mrna1;Target=FBgn0029512.1 111 539 +
Chr2	stalkie_big_nohaplotig	exon	110725621	110726095	100	+	.	Parent=FBgn0029512.1.mrna1;Target=FBgn0029512.1 540 1014 +
Chr2	stalkie_big_nohaplotig	CDS	110724965	110725074	.	+	0	Parent=FBgn0029512.1.mrna1;Target=FBgn0029512.1 1 110 +
Chr2	stalkie_big_nohaplotig	CDS	110725139	110725567	.	+	1	Parent=FBgn0029512.1.mrna1;Target=FBgn0029512.1 111 539 +
Chr2	stalkie_big_nohaplotig	CDS	110725621	110726095	.	+	1	Parent=FBgn0029512.1.mrna1;Target=FBgn0029512.1 540 1014 +
Chr2	gffcl	locus	110726187	110727117	.	-	.	ID=RLOC_00020520;geneIDs=FBgn0086134.1.path1;transcripts=FBgn0086134.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110726187	110727117	.	-	.	ID=FBgn0086134.1.mrna1;geneID=FBgn0086134.1.path1;Name=FBgn0086134.1;Dir=sensecoverage=100.0;identity=100.0;matches=714;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020520
Chr2	stalkie_big_nohaplotig	exon	110726187	110726358	100	-	.	Parent=FBgn0086134.1.mrna1;Target=FBgn0086134.1 543 714 +
Chr2	stalkie_big_nohaplotig	exon	110726411	110726566	100	-	.	Parent=FBgn0086134.1.mrna1;Target=FBgn0086134.1 387 542 +
Chr2	stalkie_big_nohaplotig	exon	110726622	110726877	100	-	.	Parent=FBgn0086134.1.mrna1;Target=FBgn0086134.1 131 386 +
Chr2	stalkie_big_nohaplotig	exon	110726929	110727005	100	-	.	Parent=FBgn0086134.1.mrna1;Target=FBgn0086134.1 54 130 +
Chr2	stalkie_big_nohaplotig	exon	110727065	110727117	100	-	.	Parent=FBgn0086134.1.mrna1;Target=FBgn0086134.1 1 53 +
Chr2	stalkie_big_nohaplotig	CDS	110726187	110726358	.	-	1	Parent=FBgn0086134.1.mrna1;Target=FBgn0086134.1 543 714 +
Chr2	stalkie_big_nohaplotig	CDS	110726411	110726566	.	-	1	Parent=FBgn0086134.1.mrna1;Target=FBgn0086134.1 387 542 +
Chr2	stalkie_big_nohaplotig	CDS	110726622	110726877	.	-	2	Parent=FBgn0086134.1.mrna1;Target=FBgn0086134.1 131 386 +
Chr2	stalkie_big_nohaplotig	CDS	110726929	110727005	.	-	1	Parent=FBgn0086134.1.mrna1;Target=FBgn0086134.1 54 130 +
Chr2	stalkie_big_nohaplotig	CDS	110727065	110727117	.	-	0	Parent=FBgn0086134.1.mrna1;Target=FBgn0086134.1 1 53 +
Chr2	gffcl	locus	110730398	110736668	.	-	.	ID=RLOC_00020521;geneIDs=FBgn0039131.1.path1;transcripts=FBgn0039131.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110730398	110736668	.	-	.	ID=FBgn0039131.1.mrna1;geneID=FBgn0039131.1.path1;Name=FBgn0039131.1;Dir=sensecoverage=99.8;identity=100.0;matches=1581;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020521
Chr2	stalkie_big_nohaplotig	exon	110730398	110730812	100	-	.	Parent=FBgn0039131.1.mrna1;Target=FBgn0039131.1 1170 1584 +
Chr2	stalkie_big_nohaplotig	exon	110730875	110731307	100	-	.	Parent=FBgn0039131.1.mrna1;Target=FBgn0039131.1 737 1169 +
Chr2	stalkie_big_nohaplotig	exon	110732571	110732680	100	-	.	Parent=FBgn0039131.1.mrna1;Target=FBgn0039131.1 627 736 +
Chr2	stalkie_big_nohaplotig	exon	110732743	110733137	100	-	.	Parent=FBgn0039131.1.mrna1;Target=FBgn0039131.1 232 626 +
Chr2	stalkie_big_nohaplotig	exon	110736441	110736668	100	-	.	Parent=FBgn0039131.1.mrna1;Target=FBgn0039131.1 4 231 +
Chr2	stalkie_big_nohaplotig	CDS	110730398	110730812	.	-	1	Parent=FBgn0039131.1.mrna1;Target=FBgn0039131.1 1170 1584 +
Chr2	stalkie_big_nohaplotig	CDS	110730875	110731307	.	-	2	Parent=FBgn0039131.1.mrna1;Target=FBgn0039131.1 737 1169 +
Chr2	stalkie_big_nohaplotig	CDS	110732571	110732680	.	-	1	Parent=FBgn0039131.1.mrna1;Target=FBgn0039131.1 627 736 +
Chr2	stalkie_big_nohaplotig	CDS	110732743	110733137	.	-	0	Parent=FBgn0039131.1.mrna1;Target=FBgn0039131.1 232 626 +
Chr2	stalkie_big_nohaplotig	CDS	110736441	110736668	.	-	0	Parent=FBgn0039131.1.mrna1;Target=FBgn0039131.1 4 231 +
Chr2	gffcl	locus	110749785	110750927	.	+	.	ID=RLOC_00020522;geneIDs=FBgn0003512.1.path1;transcripts=FBgn0003512.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110749785	110750927	.	+	.	ID=FBgn0003512.1.mrna1;geneID=FBgn0003512.1.path1;Name=FBgn0003512.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1142;mismatches=1;indels=0;unknowns=0;Target=FBgn0003512.1 1143 1 .;locus=RLOC_00020522
Chr2	stalkie_big_nohaplotig	exon	110749785	110750927	99	+	.	Parent=FBgn0003512.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110749785	110750927	.	+	0	Parent=FBgn0003512.1.mrna1
Chr2	gffcl	locus	110751722	110752528	.	-	.	ID=RLOC_00020523;geneIDs=FBgn0002626.1.path1;transcripts=FBgn0002626.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110751722	110752528	.	-	.	ID=FBgn0002626.1.mrna1;geneID=FBgn0002626.1.path1;Name=FBgn0002626.1;Dir=sensecoverage=100.0;identity=100.0;matches=519;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020523
Chr2	stalkie_big_nohaplotig	exon	110751722	110752030	100	-	.	Parent=FBgn0002626.1.mrna1;Target=FBgn0002626.1 211 519 +
Chr2	stalkie_big_nohaplotig	exon	110752088	110752188	100	-	.	Parent=FBgn0002626.1.mrna1;Target=FBgn0002626.1 110 210 +
Chr2	stalkie_big_nohaplotig	exon	110752420	110752528	100	-	.	Parent=FBgn0002626.1.mrna1;Target=FBgn0002626.1 1 109 +
Chr2	stalkie_big_nohaplotig	CDS	110751722	110752030	.	-	0	Parent=FBgn0002626.1.mrna1;Target=FBgn0002626.1 211 519 +
Chr2	stalkie_big_nohaplotig	CDS	110752088	110752188	.	-	2	Parent=FBgn0002626.1.mrna1;Target=FBgn0002626.1 110 210 +
Chr2	stalkie_big_nohaplotig	CDS	110752420	110752528	.	-	0	Parent=FBgn0002626.1.mrna1;Target=FBgn0002626.1 1 109 +
Chr2	gffcl	locus	110754721	110756630	.	-	.	ID=RLOC_00020524;geneIDs=FBgn0039741.1.path1;transcripts=FBgn0039741.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110754721	110756630	.	-	.	ID=FBgn0039741.1.mrna1;geneID=FBgn0039741.1.path1;Name=FBgn0039741.1;Dir=sensecoverage=100.0;identity=100.0;matches=933;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020524
Chr2	stalkie_big_nohaplotig	exon	110754721	110755002	100	-	.	Parent=FBgn0039741.1.mrna1;Target=FBgn0039741.1 652 933 +
Chr2	stalkie_big_nohaplotig	exon	110755054	110755183	100	-	.	Parent=FBgn0039741.1.mrna1;Target=FBgn0039741.1 522 651 +
Chr2	stalkie_big_nohaplotig	exon	110756040	110756335	100	-	.	Parent=FBgn0039741.1.mrna1;Target=FBgn0039741.1 226 521 +
Chr2	stalkie_big_nohaplotig	exon	110756406	110756630	100	-	.	Parent=FBgn0039741.1.mrna1;Target=FBgn0039741.1 1 225 +
Chr2	stalkie_big_nohaplotig	CDS	110754721	110755002	.	-	0	Parent=FBgn0039741.1.mrna1;Target=FBgn0039741.1 652 933 +
Chr2	stalkie_big_nohaplotig	CDS	110755054	110755183	.	-	1	Parent=FBgn0039741.1.mrna1;Target=FBgn0039741.1 522 651 +
Chr2	stalkie_big_nohaplotig	CDS	110756040	110756335	.	-	0	Parent=FBgn0039741.1.mrna1;Target=FBgn0039741.1 226 521 +
Chr2	stalkie_big_nohaplotig	CDS	110756406	110756630	.	-	0	Parent=FBgn0039741.1.mrna1;Target=FBgn0039741.1 1 225 +
Chr2	gffcl	locus	110759579	110761059	.	-	.	ID=RLOC_00020525;geneIDs=FBgn0003512.2.path1;transcripts=FBgn0003512.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110759579	110761059	.	-	.	ID=FBgn0003512.2.mrna1;geneID=FBgn0003512.2.path1;Name=FBgn0003512.2;Dir=sensecoverage=100.0;identity=99.9;matches=1253;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020525
Chr2	stalkie_big_nohaplotig	exon	110759579	110759747	100	-	.	Parent=FBgn0003512.2.mrna1;Target=FBgn0003512.2 1086 1254 +
Chr2	stalkie_big_nohaplotig	exon	110759805	110760040	100	-	.	Parent=FBgn0003512.2.mrna1;Target=FBgn0003512.2 850 1085 +
Chr2	stalkie_big_nohaplotig	exon	110760108	110760668	100	-	.	Parent=FBgn0003512.2.mrna1;Target=FBgn0003512.2 289 849 +
Chr2	stalkie_big_nohaplotig	exon	110760772	110761059	99	-	.	Parent=FBgn0003512.2.mrna1;Target=FBgn0003512.2 1 288 +
Chr2	stalkie_big_nohaplotig	CDS	110759579	110759747	.	-	1	Parent=FBgn0003512.2.mrna1;Target=FBgn0003512.2 1086 1254 +
Chr2	stalkie_big_nohaplotig	CDS	110759805	110760040	.	-	0	Parent=FBgn0003512.2.mrna1;Target=FBgn0003512.2 850 1085 +
Chr2	stalkie_big_nohaplotig	CDS	110760108	110760668	.	-	0	Parent=FBgn0003512.2.mrna1;Target=FBgn0003512.2 289 849 +
Chr2	stalkie_big_nohaplotig	CDS	110760772	110761059	.	-	0	Parent=FBgn0003512.2.mrna1;Target=FBgn0003512.2 1 288 +
Chr2	gffcl	locus	110762989	110763830	.	-	.	ID=RLOC_00020526;geneIDs=comp149137_c0_seq1.path1;transcripts=comp149137_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110762989	110763830	.	-	.	ID=comp149137_c0_seq1.mrna1;geneID=comp149137_c0_seq1.path1;Name=comp149137_c0_seq1;Dir=sensecoverage=99.9;identity=99.9;matches=683;mismatches=0;indels=1;unknowns=0;locus=RLOC_00020526
Chr2	stalkie_big_nohaplotig	exon	110762989	110763175	100	-	.	Parent=comp149137_c0_seq1.mrna1;Target=comp149137_c0_seq1 499 685 +
Chr2	stalkie_big_nohaplotig	exon	110763232	110763356	99	-	.	Parent=comp149137_c0_seq1.mrna1;Target=comp149137_c0_seq1 373 498 +
Chr2	stalkie_big_nohaplotig	exon	110763407	110763580	100	-	.	Parent=comp149137_c0_seq1.mrna1;Target=comp149137_c0_seq1 199 372 +
Chr2	stalkie_big_nohaplotig	exon	110763634	110763830	100	-	.	Parent=comp149137_c0_seq1.mrna1;Target=comp149137_c0_seq1 2 198 +
Chr2	stalkie_big_nohaplotig	CDS	110763251	110763356	.	-	2	Parent=comp149137_c0_seq1.mrna1;Target=comp149137_c0_seq1 373 479 +
Chr2	stalkie_big_nohaplotig	CDS	110763407	110763580	.	-	2	Parent=comp149137_c0_seq1.mrna1;Target=comp149137_c0_seq1 199 372 +
Chr2	stalkie_big_nohaplotig	CDS	110763634	110763694	.	-	0	Parent=comp149137_c0_seq1.mrna1;Target=comp149137_c0_seq1 138 198 +
Chr2	gffcl	locus	110766403	110770576	.	-	.	ID=RLOC_00020527;geneIDs=FBgn0037772.1.path1;transcripts=FBgn0037772.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110766403	110770576	.	-	.	ID=FBgn0037772.1.mrna1;geneID=FBgn0037772.1.path1;Name=FBgn0037772.1;Dir=sensecoverage=100.0;identity=99.9;matches=1990;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020527
Chr2	stalkie_big_nohaplotig	exon	110766403	110766536	100	-	.	Parent=FBgn0037772.1.mrna1;Target=FBgn0037772.1 1859 1992 +
Chr2	stalkie_big_nohaplotig	exon	110766654	110766789	100	-	.	Parent=FBgn0037772.1.mrna1;Target=FBgn0037772.1 1723 1858 +
Chr2	stalkie_big_nohaplotig	exon	110766858	110768060	99	-	.	Parent=FBgn0037772.1.mrna1;Target=FBgn0037772.1 520 1722 +
Chr2	stalkie_big_nohaplotig	exon	110770058	110770576	99	-	.	Parent=FBgn0037772.1.mrna1;Target=FBgn0037772.1 1 519 +
Chr2	stalkie_big_nohaplotig	CDS	110766403	110766536	.	-	2	Parent=FBgn0037772.1.mrna1;Target=FBgn0037772.1 1859 1992 +
Chr2	stalkie_big_nohaplotig	CDS	110766654	110766789	.	-	0	Parent=FBgn0037772.1.mrna1;Target=FBgn0037772.1 1723 1858 +
Chr2	stalkie_big_nohaplotig	CDS	110766858	110768060	.	-	0	Parent=FBgn0037772.1.mrna1;Target=FBgn0037772.1 520 1722 +
Chr2	stalkie_big_nohaplotig	CDS	110770058	110770576	.	-	0	Parent=FBgn0037772.1.mrna1;Target=FBgn0037772.1 1 519 +
Chr2	gffcl	locus	110772891	110779209	.	+	.	ID=RLOC_00020528;geneIDs=FBgn0085496.1.path1,FBgn0085498.1.path1;transcripts=FBgn0085498.1.mrna1,FBgn0085496.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110772891	110775096	.	+	.	ID=FBgn0085498.1.mrna1;geneID=FBgn0085498.1.path1;Name=FBgn0085498.1;Dir=sensecoverage=100.0;identity=99.7;matches=1921;mismatches=4;indels=1;unknowns=0;locus=RLOC_00020528
Chr2	stalkie_big_nohaplotig	exon	110772891	110773482	99	+	.	Parent=FBgn0085498.1.mrna1;Target=FBgn0085498.1 1 592 +
Chr2	stalkie_big_nohaplotig	exon	110773541	110773869	100	+	.	Parent=FBgn0085498.1.mrna1;Target=FBgn0085498.1 593 921 +
Chr2	stalkie_big_nohaplotig	exon	110773971	110774165	98	+	.	Parent=FBgn0085498.1.mrna1;Target=FBgn0085498.1 922 1116 +
Chr2	stalkie_big_nohaplotig	exon	110774226	110774938	99	+	.	Parent=FBgn0085498.1.mrna1;Target=FBgn0085498.1 1117 1829 +
Chr2	stalkie_big_nohaplotig	exon	110775001	110775096	98	+	.	Parent=FBgn0085498.1.mrna1;Target=FBgn0085498.1 1830 1926 +
Chr2	stalkie_big_nohaplotig	CDS	110772891	110773482	.	+	0	Parent=FBgn0085498.1.mrna1;Target=FBgn0085498.1 1 592 +
Chr2	stalkie_big_nohaplotig	CDS	110773541	110773869	.	+	2	Parent=FBgn0085498.1.mrna1;Target=FBgn0085498.1 593 921 +
Chr2	stalkie_big_nohaplotig	CDS	110773971	110774165	.	+	0	Parent=FBgn0085498.1.mrna1;Target=FBgn0085498.1 922 1116 +
Chr2	stalkie_big_nohaplotig	CDS	110774226	110774938	.	+	0	Parent=FBgn0085498.1.mrna1;Target=FBgn0085498.1 1117 1829 +
Chr2	stalkie_big_nohaplotig	CDS	110775001	110775096	.	+	1	Parent=FBgn0085498.1.mrna1;Target=FBgn0085498.1 1830 1926 +
Chr2	stalkie_big_nohaplotig	mRNA	110775009	110779209	.	+	.	ID=FBgn0085496.1.mrna1;geneID=FBgn0085496.1.path1;Name=FBgn0085496.1;Dir=sensecoverage=100.0;identity=99.9;matches=1508;mismatches=0;indels=1;unknowns=0;Target=FBgn0085496.1 3 92 +;locus=RLOC_00020528
Chr2	stalkie_big_nohaplotig	exon	110775009	110775238	99	+	.	Parent=FBgn0085496.1.mrna1;Target=FBgn0085496.1 1 231 +
Chr2	stalkie_big_nohaplotig	exon	110777296	110777548	100	+	.	Parent=FBgn0085496.1.mrna1;Target=FBgn0085496.1 232 484 +
Chr2	stalkie_big_nohaplotig	exon	110777606	110777804	100	+	.	Parent=FBgn0085496.1.mrna1;Target=FBgn0085496.1 485 683 +
Chr2	stalkie_big_nohaplotig	exon	110777859	110778059	100	+	.	Parent=FBgn0085496.1.mrna1;Target=FBgn0085496.1 684 884 +
Chr2	stalkie_big_nohaplotig	exon	110778120	110778291	100	+	.	Parent=FBgn0085496.1.mrna1;Target=FBgn0085496.1 885 1056 +
Chr2	stalkie_big_nohaplotig	exon	110778757	110779209	100	+	.	Parent=FBgn0085496.1.mrna1;Target=FBgn0085496.1 1057 1509 +
Chr2	stalkie_big_nohaplotig	CDS	110775011	110775099	.	+	0	Parent=FBgn0085496.1.mrna1
Chr2	gffcl	locus	110780817	110781427	.	-	.	ID=RLOC_00020529;geneIDs=comp132630_c0_seq1.path1;transcripts=comp132630_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110780817	110781427	.	-	.	ID=comp132630_c0_seq1.mrna1;geneID=comp132630_c0_seq1.path1;Name=comp132630_c0_seq1;Dir=indeterminatecoverage=93.7;identity=100.0;matches=611;mismatches=0;indels=0;unknowns=0;Target=comp132630_c0_seq1 636 26 .;CDS_Target=comp132630_c0_seq1 388 251 .;locus=RLOC_00020529
Chr2	stalkie_big_nohaplotig	exon	110780817	110781427	100	-	.	Parent=comp132630_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110781065	110781202	.	-	0	Parent=comp132630_c0_seq1.mrna1
Chr2	gffcl	locus	110782519	110783701	.	+	.	ID=RLOC_00020530;geneIDs=comp152214_c0_seq1.path1;transcripts=comp152214_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110782519	110783701	.	+	.	ID=comp152214_c0_seq1.mrna1;geneID=comp152214_c0_seq1.path1;Name=comp152214_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1171;mismatches=10;indels=5;unknowns=0;Target=comp152214_c0_seq1 1184 1 .;CDS_Target=comp152214_c0_seq1 343 242 .;locus=RLOC_00020530
Chr2	stalkie_big_nohaplotig	exon	110782519	110783701	98	+	.	Parent=comp152214_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110782760	110782860	.	+	0	Parent=comp152214_c0_seq1.mrna1
Chr2	gffcl	locus	110790050	110790496	.	+	.	ID=RLOC_00020531;geneIDs=comp146656_c0_seq1.path1;transcripts=comp146656_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110790050	110790496	.	+	.	ID=comp146656_c0_seq1.mrna1;geneID=comp146656_c0_seq1.path1;Name=comp146656_c0_seq1;Dir=indeterminatecoverage=98.9;identity=100.0;matches=447;mismatches=0;indels=0;unknowns=0;Target=comp146656_c0_seq1 452 6 .;CDS_Target=comp146656_c0_seq1 87 7 .;locus=RLOC_00020531
Chr2	stalkie_big_nohaplotig	exon	110790050	110790496	100	+	.	Parent=comp146656_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110790051	110790131	.	+	0	Parent=comp146656_c0_seq1.mrna1
Chr2	gffcl	locus	110791832	110792500	.	-	.	ID=RLOC_00020532;geneIDs=comp103502_c0_seq1.path1;transcripts=comp103502_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110791832	110792500	.	-	.	ID=comp103502_c0_seq1.mrna1;geneID=comp103502_c0_seq1.path1;Name=comp103502_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=669;mismatches=0;indels=0;unknowns=0;Target=comp103502_c0_seq1 669 1 .;CDS_Target=comp103502_c0_seq1 527 369 .;locus=RLOC_00020532
Chr2	stalkie_big_nohaplotig	exon	110791832	110792500	100	-	.	Parent=comp103502_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110791974	110792132	.	-	0	Parent=comp103502_c0_seq1.mrna1
Chr2	gffcl	locus	110794603	110955958	.	-	.	ID=RLOC_00020533;geneIDs=FBgn0263097.1.path1;transcripts=FBgn0263097.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110794603	110955958	.	-	.	ID=FBgn0263097.1.mrna1;geneID=FBgn0263097.1.path1;Name=FBgn0263097.1;Dir=sensecoverage=99.3;identity=99.9;matches=1339;mismatches=0;indels=2;unknowns=0;locus=RLOC_00020533
Chr2	stalkie_big_nohaplotig	exon	110794603	110794623	95	-	.	Parent=FBgn0263097.1.mrna1;Target=FBgn0263097.1 1329 1350 +
Chr2	stalkie_big_nohaplotig	exon	110799408	110799505	100	-	.	Parent=FBgn0263097.1.mrna1;Target=FBgn0263097.1 1231 1328 +
Chr2	stalkie_big_nohaplotig	exon	110845631	110845842	100	-	.	Parent=FBgn0263097.1.mrna1;Target=FBgn0263097.1 1019 1230 +
Chr2	stalkie_big_nohaplotig	exon	110846106	110846239	100	-	.	Parent=FBgn0263097.1.mrna1;Target=FBgn0263097.1 885 1018 +
Chr2	stalkie_big_nohaplotig	exon	110866087	110866265	100	-	.	Parent=FBgn0263097.1.mrna1;Target=FBgn0263097.1 706 884 +
Chr2	stalkie_big_nohaplotig	exon	110955264	110955958	99	-	.	Parent=FBgn0263097.1.mrna1;Target=FBgn0263097.1 10 705 +
Chr2	stalkie_big_nohaplotig	CDS	110794603	110794623	.	-	1	Parent=FBgn0263097.1.mrna1;Target=FBgn0263097.1 1329 1350 +
Chr2	stalkie_big_nohaplotig	CDS	110799408	110799505	.	-	0	Parent=FBgn0263097.1.mrna1;Target=FBgn0263097.1 1231 1328 +
Chr2	stalkie_big_nohaplotig	CDS	110845631	110845842	.	-	2	Parent=FBgn0263097.1.mrna1;Target=FBgn0263097.1 1019 1230 +
Chr2	stalkie_big_nohaplotig	CDS	110846106	110846239	.	-	1	Parent=FBgn0263097.1.mrna1;Target=FBgn0263097.1 885 1018 +
Chr2	stalkie_big_nohaplotig	CDS	110866087	110866265	.	-	0	Parent=FBgn0263097.1.mrna1;Target=FBgn0263097.1 706 884 +
Chr2	stalkie_big_nohaplotig	CDS	110955264	110955821	.	-	0	Parent=FBgn0263097.1.mrna1;Target=FBgn0263097.1 148 705 +
Chr2	gffcl	locus	110795461	110797772	.	+	.	ID=RLOC_00020534;geneIDs=FBgn0037770.2.path1;transcripts=FBgn0037770.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110795461	110797772	.	+	.	ID=FBgn0037770.2.mrna1;geneID=FBgn0037770.2.path1;Name=FBgn0037770.2;Dir=sensecoverage=100.0;identity=100.0;matches=1710;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020534
Chr2	stalkie_big_nohaplotig	exon	110795461	110795788	100	+	.	Parent=FBgn0037770.2.mrna1;Target=FBgn0037770.2 1 328 +
Chr2	stalkie_big_nohaplotig	exon	110796141	110796272	100	+	.	Parent=FBgn0037770.2.mrna1;Target=FBgn0037770.2 329 460 +
Chr2	stalkie_big_nohaplotig	exon	110796331	110796533	100	+	.	Parent=FBgn0037770.2.mrna1;Target=FBgn0037770.2 461 663 +
Chr2	stalkie_big_nohaplotig	exon	110796603	110797161	100	+	.	Parent=FBgn0037770.2.mrna1;Target=FBgn0037770.2 664 1222 +
Chr2	stalkie_big_nohaplotig	exon	110797230	110797631	100	+	.	Parent=FBgn0037770.2.mrna1;Target=FBgn0037770.2 1223 1624 +
Chr2	stalkie_big_nohaplotig	exon	110797687	110797772	100	+	.	Parent=FBgn0037770.2.mrna1;Target=FBgn0037770.2 1625 1710 +
Chr2	stalkie_big_nohaplotig	CDS	110795461	110795788	.	+	0	Parent=FBgn0037770.2.mrna1;Target=FBgn0037770.2 1 328 +
Chr2	stalkie_big_nohaplotig	CDS	110796141	110796272	.	+	2	Parent=FBgn0037770.2.mrna1;Target=FBgn0037770.2 329 460 +
Chr2	stalkie_big_nohaplotig	CDS	110796331	110796533	.	+	2	Parent=FBgn0037770.2.mrna1;Target=FBgn0037770.2 461 663 +
Chr2	stalkie_big_nohaplotig	CDS	110796603	110797161	.	+	0	Parent=FBgn0037770.2.mrna1;Target=FBgn0037770.2 664 1222 +
Chr2	stalkie_big_nohaplotig	CDS	110797230	110797631	.	+	2	Parent=FBgn0037770.2.mrna1;Target=FBgn0037770.2 1223 1624 +
Chr2	stalkie_big_nohaplotig	CDS	110797687	110797772	.	+	2	Parent=FBgn0037770.2.mrna1;Target=FBgn0037770.2 1625 1710 +
Chr2	gffcl	locus	110890506	112860942	.	-	.	ID=RLOC_00020535;geneIDs=comp45894_c0_seq1.path1;transcripts=comp45894_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110890506	112860942	.	-	.	ID=comp45894_c0_seq1.mrna1;geneID=comp45894_c0_seq1.path1;Name=comp45894_c0_seq1;Dir=indeterminatecoverage=90.1;identity=99.0;matches=297;mismatches=3;indels=0;unknowns=0;Target=comp45894_c0_seq1 111 1 .;locus=RLOC_00020535
Chr2	stalkie_big_nohaplotig	exon	110890506	110890509	100	-	.	Parent=comp45894_c0_seq1.mrna1;Target=comp45894_c0_seq1 300 297 .
Chr2	stalkie_big_nohaplotig	exon	110898222	110898223	100	-	.	Parent=comp45894_c0_seq1.mrna1;Target=comp45894_c0_seq1 296 295 .
Chr2	stalkie_big_nohaplotig	exon	110904013	110904019	100	-	.	Parent=comp45894_c0_seq1.mrna1;Target=comp45894_c0_seq1 294 288 .
Chr2	stalkie_big_nohaplotig	exon	110907461	110907466	100	-	.	Parent=comp45894_c0_seq1.mrna1;Target=comp45894_c0_seq1 287 282 .
Chr2	stalkie_big_nohaplotig	exon	110907535	110907538	100	-	.	Parent=comp45894_c0_seq1.mrna1;Target=comp45894_c0_seq1 281 278 .
Chr2	stalkie_big_nohaplotig	exon	110910035	110910047	100	-	.	Parent=comp45894_c0_seq1.mrna1;Target=comp45894_c0_seq1 277 265 .
Chr2	stalkie_big_nohaplotig	exon	110911326	110911330	100	-	.	Parent=comp45894_c0_seq1.mrna1;Target=comp45894_c0_seq1 264 260 .
Chr2	stalkie_big_nohaplotig	exon	110915708	110915709	100	-	.	Parent=comp45894_c0_seq1.mrna1;Target=comp45894_c0_seq1 259 258 .
Chr2	stalkie_big_nohaplotig	exon	110915982	110915983	100	-	.	Parent=comp45894_c0_seq1.mrna1;Target=comp45894_c0_seq1 257 256 .
Chr2	stalkie_big_nohaplotig	exon	110922586	110922594	100	-	.	Parent=comp45894_c0_seq1.mrna1;Target=comp45894_c0_seq1 255 247 .
Chr2	stalkie_big_nohaplotig	exon	110928784	110928789	100	-	.	Parent=comp45894_c0_seq1.mrna1;Target=comp45894_c0_seq1 246 241 .
Chr2	stalkie_big_nohaplotig	exon	112860703	112860942	98	-	.	Parent=comp45894_c0_seq1.mrna1;Target=comp45894_c0_seq1 240 1 .
Chr2	stalkie_big_nohaplotig	CDS	112860832	112860942	.	-	0	Parent=comp45894_c0_seq1.mrna1
Chr2	gffcl	locus	110956883	110957649	.	-	.	ID=RLOC_00020536;geneIDs=comp145143_c2_seq1.path1;transcripts=comp145143_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110956883	110957649	.	-	.	ID=comp145143_c2_seq1.mrna1;geneID=comp145143_c2_seq1.path1;Name=comp145143_c2_seq1;Dir=indeterminatecoverage=97.3;identity=99.5;matches=763;mismatches=4;indels=0;unknowns=0;Target=comp145143_c2_seq1 785 19 .;CDS_Target=comp145143_c2_seq1 555 208 .;locus=RLOC_00020536
Chr2	stalkie_big_nohaplotig	exon	110956883	110957649	99	-	.	Parent=comp145143_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110957113	110957460	.	-	0	Parent=comp145143_c2_seq1.mrna1
Chr2	gffcl	locus	110957670	110958302	.	+	.	ID=RLOC_00020537;geneIDs=comp135438_c0_seq1.path1;transcripts=comp135438_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110957670	110958302	.	+	.	ID=comp135438_c0_seq1.mrna1;geneID=comp135438_c0_seq1.path1;Name=comp135438_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.4;matches=629;mismatches=4;indels=0;unknowns=0;Target=comp135438_c0_seq1 635 3 .;CDS_Target=comp135438_c0_seq1 525 445 .;locus=RLOC_00020537
Chr2	stalkie_big_nohaplotig	exon	110957670	110958302	99	+	.	Parent=comp135438_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	110958112	110958192	.	+	0	Parent=comp135438_c0_seq1.mrna1
Chr2	gffcl	locus	110988996	110992702	.	-	.	ID=RLOC_00020538;geneIDs=FBgn0038006.1.path1;transcripts=FBgn0038006.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	110988996	110992702	.	-	.	ID=FBgn0038006.1.mrna1;geneID=FBgn0038006.1.path1;Name=FBgn0038006.1;Dir=sensecoverage=100.0;identity=100.0;matches=1626;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020538
Chr2	stalkie_big_nohaplotig	exon	110988996	110989153	100	-	.	Parent=FBgn0038006.1.mrna1;Target=FBgn0038006.1 1469 1626 +
Chr2	stalkie_big_nohaplotig	exon	110989211	110989634	100	-	.	Parent=FBgn0038006.1.mrna1;Target=FBgn0038006.1 1045 1468 +
Chr2	stalkie_big_nohaplotig	exon	110989699	110989869	100	-	.	Parent=FBgn0038006.1.mrna1;Target=FBgn0038006.1 874 1044 +
Chr2	stalkie_big_nohaplotig	exon	110989935	110990049	100	-	.	Parent=FBgn0038006.1.mrna1;Target=FBgn0038006.1 759 873 +
Chr2	stalkie_big_nohaplotig	exon	110991745	110991814	100	-	.	Parent=FBgn0038006.1.mrna1;Target=FBgn0038006.1 689 758 +
Chr2	stalkie_big_nohaplotig	exon	110991879	110992064	100	-	.	Parent=FBgn0038006.1.mrna1;Target=FBgn0038006.1 503 688 +
Chr2	stalkie_big_nohaplotig	exon	110992142	110992345	100	-	.	Parent=FBgn0038006.1.mrna1;Target=FBgn0038006.1 299 502 +
Chr2	stalkie_big_nohaplotig	exon	110992405	110992702	100	-	.	Parent=FBgn0038006.1.mrna1;Target=FBgn0038006.1 1 298 +
Chr2	stalkie_big_nohaplotig	CDS	110988996	110989153	.	-	2	Parent=FBgn0038006.1.mrna1;Target=FBgn0038006.1 1469 1626 +
Chr2	stalkie_big_nohaplotig	CDS	110989211	110989634	.	-	0	Parent=FBgn0038006.1.mrna1;Target=FBgn0038006.1 1045 1468 +
Chr2	stalkie_big_nohaplotig	CDS	110989699	110989869	.	-	0	Parent=FBgn0038006.1.mrna1;Target=FBgn0038006.1 874 1044 +
Chr2	stalkie_big_nohaplotig	CDS	110989935	110990049	.	-	1	Parent=FBgn0038006.1.mrna1;Target=FBgn0038006.1 759 873 +
Chr2	stalkie_big_nohaplotig	CDS	110991745	110991814	.	-	2	Parent=FBgn0038006.1.mrna1;Target=FBgn0038006.1 689 758 +
Chr2	stalkie_big_nohaplotig	CDS	110991879	110992064	.	-	2	Parent=FBgn0038006.1.mrna1;Target=FBgn0038006.1 503 688 +
Chr2	stalkie_big_nohaplotig	CDS	110992142	110992345	.	-	2	Parent=FBgn0038006.1.mrna1;Target=FBgn0038006.1 299 502 +
Chr2	stalkie_big_nohaplotig	CDS	110992405	110992702	.	-	0	Parent=FBgn0038006.1.mrna1;Target=FBgn0038006.1 1 298 +
Chr2	gffcl	locus	111055600	111056397	.	+	.	ID=RLOC_00020539;geneIDs=comp149826_c0_seq1.path1;transcripts=comp149826_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111055600	111056397	.	+	.	ID=comp149826_c0_seq1.mrna1;geneID=comp149826_c0_seq1.path1;Name=comp149826_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=797;mismatches=1;indels=0;unknowns=0;Target=comp149826_c0_seq1 798 1 .;CDS_Target=comp149826_c0_seq1 638 375 .;locus=RLOC_00020539
Chr2	stalkie_big_nohaplotig	exon	111055600	111056397	99	+	.	Parent=comp149826_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111055974	111056237	.	+	0	Parent=comp149826_c0_seq1.mrna1
Chr2	gffcl	locus	111057102	111057344	.	-	.	ID=RLOC_00020540;geneIDs=comp115877_c0_seq1.path1;transcripts=comp115877_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111057102	111057344	.	-	.	ID=comp115877_c0_seq1.mrna1;geneID=comp115877_c0_seq1.path1;Name=comp115877_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=243;mismatches=0;indels=0;unknowns=0;Target=comp115877_c0_seq1 243 1 .;CDS_Target=comp115877_c0_seq1 133 2 .;locus=RLOC_00020540
Chr2	stalkie_big_nohaplotig	exon	111057102	111057344	100	-	.	Parent=comp115877_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111057212	111057343	.	-	0	Parent=comp115877_c0_seq1.mrna1
Chr2	gffcl	locus	111058257	111059556	.	-	.	ID=RLOC_00020541;geneIDs=comp157325_c0_seq1.path1;transcripts=comp157325_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111058257	111059556	.	-	.	ID=comp157325_c0_seq1.mrna1;geneID=comp157325_c0_seq1.path1;Name=comp157325_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=1298;mismatches=2;indels=0;unknowns=0;Target=comp157325_c0_seq1 1302 3 .;CDS_Target=comp157325_c0_seq1 992 795 .;locus=RLOC_00020541
Chr2	stalkie_big_nohaplotig	exon	111058257	111059556	99	-	.	Parent=comp157325_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111058567	111058764	.	-	0	Parent=comp157325_c0_seq1.mrna1
Chr2	gffcl	locus	111061677	111062126	.	-	.	ID=RLOC_00020542;geneIDs=comp145138_c0_seq1.path1;transcripts=comp145138_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111061677	111062126	.	-	.	ID=comp145138_c0_seq1.mrna1;geneID=comp145138_c0_seq1.path1;Name=comp145138_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=450;mismatches=0;indels=0;unknowns=0;Target=comp145138_c0_seq1 450 1 .;CDS_Target=comp145138_c0_seq1 281 201 .;locus=RLOC_00020542
Chr2	stalkie_big_nohaplotig	exon	111061677	111062126	100	-	.	Parent=comp145138_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111061846	111061926	.	-	0	Parent=comp145138_c0_seq1.mrna1
Chr2	gffcl	locus	111062344	111063472	.	-	.	ID=RLOC_00020543;geneIDs=comp156055_c0_seq1.path1;transcripts=comp156055_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111062344	111063472	.	-	.	ID=comp156055_c0_seq1.mrna1;geneID=comp156055_c0_seq1.path1;Name=comp156055_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1126;mismatches=3;indels=0;unknowns=0;Target=comp156055_c0_seq1 1129 1 .;CDS_Target=comp156055_c0_seq1 1062 943 .;locus=RLOC_00020543
Chr2	stalkie_big_nohaplotig	exon	111062344	111063472	99	-	.	Parent=comp156055_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111062411	111062530	.	-	0	Parent=comp156055_c0_seq1.mrna1
Chr2	gffcl	locus	111064397	111065699	.	.	.	ID=RLOC_00020544;geneIDs=comp114141_c0_seq1.path1,comp114222_c0_seq1.path1;transcripts=comp114141_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111064397	111065064	.	+	.	ID=comp114141_c0_seq1.mrna1;geneID=comp114141_c0_seq1.path1;Name=comp114141_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=668;mismatches=0;indels=0;unknowns=0;Target=comp114141_c0_seq1 668 1 .;CDS_Target=comp114141_c0_seq1 441 304 .;locus=RLOC_00020544
Chr2	stalkie_big_nohaplotig	exon	111064397	111065064	100	+	.	Parent=comp114141_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111064700	111064837	.	+	0	Parent=comp114141_c0_seq1.mrna1
Chr2	gffcl	locus	111090330	111097543	.	-	.	ID=RLOC_00020545;geneIDs=FBgn0000427.1.path1;transcripts=FBgn0000427.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111090330	111097543	.	-	.	ID=FBgn0000427.1.mrna1;geneID=FBgn0000427.1.path1;Name=FBgn0000427.1;Dir=sensecoverage=100.0;identity=99.9;matches=4784;mismatches=4;indels=0;unknowns=0;locus=RLOC_00020545
Chr2	stalkie_big_nohaplotig	exon	111090330	111090843	100	-	.	Parent=FBgn0000427.1.mrna1;Target=FBgn0000427.1 4275 4788 +
Chr2	stalkie_big_nohaplotig	exon	111092915	111093072	100	-	.	Parent=FBgn0000427.1.mrna1;Target=FBgn0000427.1 4117 4274 +
Chr2	stalkie_big_nohaplotig	exon	111093301	111097122	99	-	.	Parent=FBgn0000427.1.mrna1;Target=FBgn0000427.1 295 4116 +
Chr2	stalkie_big_nohaplotig	exon	111097186	111097452	99	-	.	Parent=FBgn0000427.1.mrna1;Target=FBgn0000427.1 28 294 +
Chr2	stalkie_big_nohaplotig	exon	111097517	111097543	100	-	.	Parent=FBgn0000427.1.mrna1;Target=FBgn0000427.1 1 27 +
Chr2	stalkie_big_nohaplotig	CDS	111090330	111090843	.	-	1	Parent=FBgn0000427.1.mrna1;Target=FBgn0000427.1 4275 4788 +
Chr2	stalkie_big_nohaplotig	CDS	111092915	111093072	.	-	0	Parent=FBgn0000427.1.mrna1;Target=FBgn0000427.1 4117 4274 +
Chr2	stalkie_big_nohaplotig	CDS	111093301	111097122	.	-	0	Parent=FBgn0000427.1.mrna1;Target=FBgn0000427.1 295 4116 +
Chr2	stalkie_big_nohaplotig	CDS	111097186	111097452	.	-	0	Parent=FBgn0000427.1.mrna1;Target=FBgn0000427.1 28 294 +
Chr2	stalkie_big_nohaplotig	CDS	111097517	111097543	.	-	0	Parent=FBgn0000427.1.mrna1;Target=FBgn0000427.1 1 27 +
Chr2	gffcl	locus	111103711	111105643	.	+	.	ID=RLOC_00020546;geneIDs=FBgn0037561.1.path1;transcripts=FBgn0037561.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111103711	111105643	.	+	.	ID=FBgn0037561.1.mrna1;geneID=FBgn0037561.1.path1;Name=FBgn0037561.1;Dir=sensecoverage=100.0;identity=99.8;matches=1752;mismatches=2;indels=1;unknowns=0;locus=RLOC_00020546
Chr2	stalkie_big_nohaplotig	exon	111103711	111103848	100	+	.	Parent=FBgn0037561.1.mrna1;Target=FBgn0037561.1 1 138 +
Chr2	stalkie_big_nohaplotig	exon	111103912	111104307	99	+	.	Parent=FBgn0037561.1.mrna1;Target=FBgn0037561.1 139 534 +
Chr2	stalkie_big_nohaplotig	exon	111104370	111105107	99	+	.	Parent=FBgn0037561.1.mrna1;Target=FBgn0037561.1 535 1272 +
Chr2	stalkie_big_nohaplotig	exon	111105162	111105643	99	+	.	Parent=FBgn0037561.1.mrna1;Target=FBgn0037561.1 1273 1755 +
Chr2	stalkie_big_nohaplotig	CDS	111103711	111103848	.	+	0	Parent=FBgn0037561.1.mrna1;Target=FBgn0037561.1 1 138 +
Chr2	stalkie_big_nohaplotig	CDS	111103912	111104307	.	+	0	Parent=FBgn0037561.1.mrna1;Target=FBgn0037561.1 139 534 +
Chr2	stalkie_big_nohaplotig	CDS	111104370	111105107	.	+	0	Parent=FBgn0037561.1.mrna1;Target=FBgn0037561.1 535 1272 +
Chr2	stalkie_big_nohaplotig	CDS	111105162	111105643	.	+	0	Parent=FBgn0037561.1.mrna1;Target=FBgn0037561.1 1273 1755 +
Chr2	gffcl	locus	111105741	111106196	.	-	.	ID=RLOC_00020547;geneIDs=comp152413_c0_seq1.path1;transcripts=comp152413_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111105741	111106196	.	-	.	ID=comp152413_c0_seq1.mrna1;geneID=comp152413_c0_seq1.path1;Name=comp152413_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=441;mismatches=8;indels=7;unknowns=0;Target=comp152413_c0_seq1 449 1 .;CDS_Target=comp152413_c0_seq1 28 2 .;locus=RLOC_00020547
Chr2	stalkie_big_nohaplotig	exon	111105741	111106196	96	-	.	Parent=comp152413_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111106164	111106195	.	-	0	Parent=comp152413_c0_seq1.mrna1
Chr2	gffcl	locus	111107114	111110004	.	+	.	ID=RLOC_00020548;geneIDs=FBgn0014861.1.path1;transcripts=FBgn0014861.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111107114	111110004	.	+	.	ID=FBgn0014861.1.mrna1;geneID=FBgn0014861.1.path1;Name=FBgn0014861.1;Dir=sensecoverage=100.0;identity=100.0;matches=2666;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020548
Chr2	stalkie_big_nohaplotig	exon	111107114	111107131	100	+	.	Parent=FBgn0014861.1.mrna1;Target=FBgn0014861.1 1 18 +
Chr2	stalkie_big_nohaplotig	exon	111107188	111108225	100	+	.	Parent=FBgn0014861.1.mrna1;Target=FBgn0014861.1 19 1056 +
Chr2	stalkie_big_nohaplotig	exon	111108291	111109382	100	+	.	Parent=FBgn0014861.1.mrna1;Target=FBgn0014861.1 1057 2148 +
Chr2	stalkie_big_nohaplotig	exon	111109486	111110004	99	+	.	Parent=FBgn0014861.1.mrna1;Target=FBgn0014861.1 2149 2667 +
Chr2	stalkie_big_nohaplotig	CDS	111107114	111107131	.	+	0	Parent=FBgn0014861.1.mrna1;Target=FBgn0014861.1 1 18 +
Chr2	stalkie_big_nohaplotig	CDS	111107188	111108225	.	+	0	Parent=FBgn0014861.1.mrna1;Target=FBgn0014861.1 19 1056 +
Chr2	stalkie_big_nohaplotig	CDS	111108291	111109382	.	+	0	Parent=FBgn0014861.1.mrna1;Target=FBgn0014861.1 1057 2148 +
Chr2	stalkie_big_nohaplotig	CDS	111109486	111110004	.	+	0	Parent=FBgn0014861.1.mrna1;Target=FBgn0014861.1 2149 2667 +
Chr2	gffcl	locus	111114454	111118499	.	+	.	ID=RLOC_00020549;geneIDs=FBgn0038814.1.path1;transcripts=FBgn0038814.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111114454	111118499	.	+	.	ID=FBgn0038814.1.mrna1;geneID=FBgn0038814.1.path1;Name=FBgn0038814.1;Dir=sensecoverage=100.0;identity=100.0;matches=1821;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020549
Chr2	stalkie_big_nohaplotig	exon	111114454	111115143	100	+	.	Parent=FBgn0038814.1.mrna1;Target=FBgn0038814.1 1 690 +
Chr2	stalkie_big_nohaplotig	exon	111115202	111115474	100	+	.	Parent=FBgn0038814.1.mrna1;Target=FBgn0038814.1 691 963 +
Chr2	stalkie_big_nohaplotig	exon	111117392	111117759	100	+	.	Parent=FBgn0038814.1.mrna1;Target=FBgn0038814.1 964 1331 +
Chr2	stalkie_big_nohaplotig	exon	111117818	111117977	100	+	.	Parent=FBgn0038814.1.mrna1;Target=FBgn0038814.1 1332 1491 +
Chr2	stalkie_big_nohaplotig	exon	111118039	111118126	100	+	.	Parent=FBgn0038814.1.mrna1;Target=FBgn0038814.1 1492 1579 +
Chr2	stalkie_big_nohaplotig	exon	111118193	111118356	100	+	.	Parent=FBgn0038814.1.mrna1;Target=FBgn0038814.1 1580 1743 +
Chr2	stalkie_big_nohaplotig	exon	111118422	111118499	100	+	.	Parent=FBgn0038814.1.mrna1;Target=FBgn0038814.1 1744 1821 +
Chr2	stalkie_big_nohaplotig	CDS	111114454	111115143	.	+	0	Parent=FBgn0038814.1.mrna1;Target=FBgn0038814.1 1 690 +
Chr2	stalkie_big_nohaplotig	CDS	111115202	111115474	.	+	0	Parent=FBgn0038814.1.mrna1;Target=FBgn0038814.1 691 963 +
Chr2	stalkie_big_nohaplotig	CDS	111117392	111117759	.	+	0	Parent=FBgn0038814.1.mrna1;Target=FBgn0038814.1 964 1331 +
Chr2	stalkie_big_nohaplotig	CDS	111117818	111117977	.	+	1	Parent=FBgn0038814.1.mrna1;Target=FBgn0038814.1 1332 1491 +
Chr2	stalkie_big_nohaplotig	CDS	111118039	111118126	.	+	0	Parent=FBgn0038814.1.mrna1;Target=FBgn0038814.1 1492 1579 +
Chr2	stalkie_big_nohaplotig	CDS	111118193	111118356	.	+	2	Parent=FBgn0038814.1.mrna1;Target=FBgn0038814.1 1580 1743 +
Chr2	stalkie_big_nohaplotig	CDS	111118422	111118499	.	+	0	Parent=FBgn0038814.1.mrna1;Target=FBgn0038814.1 1744 1821 +
Chr2	gffcl	locus	111122032	111123365	.	.	.	ID=RLOC_00020550;geneIDs=comp100548_c0_seq1.path1,comp140480_c0_seq1.path1;transcripts=comp100548_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111122630	111123365	.	-	.	ID=comp100548_c0_seq1.mrna1;geneID=comp100548_c0_seq1.path1;Name=comp100548_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=735;mismatches=1;indels=0;unknowns=0;Target=comp100548_c0_seq1 736 1 .;CDS_Target=comp100548_c0_seq1 410 249 .;locus=RLOC_00020550
Chr2	stalkie_big_nohaplotig	exon	111122630	111123365	99	-	.	Parent=comp100548_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111122956	111123117	.	-	0	Parent=comp100548_c0_seq1.mrna1
Chr2	gffcl	locus	111126382	111149748	.	-	.	ID=RLOC_00020551;geneIDs=FBgn0023097.1.path1;transcripts=FBgn0023097.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111126382	111149748	.	-	.	ID=FBgn0023097.1.mrna1;geneID=FBgn0023097.1.path1;Name=FBgn0023097.1;Dir=sensecoverage=100.0;identity=100.0;matches=3396;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020551
Chr2	stalkie_big_nohaplotig	exon	111126382	111126672	100	-	.	Parent=FBgn0023097.1.mrna1;Target=FBgn0023097.1 3106 3396 +
Chr2	stalkie_big_nohaplotig	exon	111128402	111128525	100	-	.	Parent=FBgn0023097.1.mrna1;Target=FBgn0023097.1 2982 3105 +
Chr2	stalkie_big_nohaplotig	exon	111128590	111128944	100	-	.	Parent=FBgn0023097.1.mrna1;Target=FBgn0023097.1 2627 2981 +
Chr2	stalkie_big_nohaplotig	exon	111129373	111129547	100	-	.	Parent=FBgn0023097.1.mrna1;Target=FBgn0023097.1 2452 2626 +
Chr2	stalkie_big_nohaplotig	exon	111129855	111130120	100	-	.	Parent=FBgn0023097.1.mrna1;Target=FBgn0023097.1 2186 2451 +
Chr2	stalkie_big_nohaplotig	exon	111130290	111130425	100	-	.	Parent=FBgn0023097.1.mrna1;Target=FBgn0023097.1 2050 2185 +
Chr2	stalkie_big_nohaplotig	exon	111130494	111130897	100	-	.	Parent=FBgn0023097.1.mrna1;Target=FBgn0023097.1 1646 2049 +
Chr2	stalkie_big_nohaplotig	exon	111130958	111131041	100	-	.	Parent=FBgn0023097.1.mrna1;Target=FBgn0023097.1 1562 1645 +
Chr2	stalkie_big_nohaplotig	exon	111131135	111131392	100	-	.	Parent=FBgn0023097.1.mrna1;Target=FBgn0023097.1 1304 1561 +
Chr2	stalkie_big_nohaplotig	exon	111131453	111132542	100	-	.	Parent=FBgn0023097.1.mrna1;Target=FBgn0023097.1 214 1303 +
Chr2	stalkie_big_nohaplotig	exon	111149536	111149748	100	-	.	Parent=FBgn0023097.1.mrna1;Target=FBgn0023097.1 1 213 +
Chr2	stalkie_big_nohaplotig	CDS	111126382	111126672	.	-	0	Parent=FBgn0023097.1.mrna1;Target=FBgn0023097.1 3106 3396 +
Chr2	stalkie_big_nohaplotig	CDS	111128402	111128525	.	-	1	Parent=FBgn0023097.1.mrna1;Target=FBgn0023097.1 2982 3105 +
Chr2	stalkie_big_nohaplotig	CDS	111128590	111128944	.	-	2	Parent=FBgn0023097.1.mrna1;Target=FBgn0023097.1 2627 2981 +
Chr2	stalkie_big_nohaplotig	CDS	111129373	111129547	.	-	0	Parent=FBgn0023097.1.mrna1;Target=FBgn0023097.1 2452 2626 +
Chr2	stalkie_big_nohaplotig	CDS	111129855	111130120	.	-	2	Parent=FBgn0023097.1.mrna1;Target=FBgn0023097.1 2186 2451 +
Chr2	stalkie_big_nohaplotig	CDS	111130290	111130425	.	-	0	Parent=FBgn0023097.1.mrna1;Target=FBgn0023097.1 2050 2185 +
Chr2	stalkie_big_nohaplotig	CDS	111130494	111130897	.	-	2	Parent=FBgn0023097.1.mrna1;Target=FBgn0023097.1 1646 2049 +
Chr2	stalkie_big_nohaplotig	CDS	111130958	111131041	.	-	2	Parent=FBgn0023097.1.mrna1;Target=FBgn0023097.1 1562 1645 +
Chr2	stalkie_big_nohaplotig	CDS	111131135	111131392	.	-	2	Parent=FBgn0023097.1.mrna1;Target=FBgn0023097.1 1304 1561 +
Chr2	stalkie_big_nohaplotig	CDS	111131453	111132542	.	-	0	Parent=FBgn0023097.1.mrna1;Target=FBgn0023097.1 214 1303 +
Chr2	stalkie_big_nohaplotig	CDS	111149536	111149748	.	-	0	Parent=FBgn0023097.1.mrna1;Target=FBgn0023097.1 1 213 +
Chr2	gffcl	locus	111152274	111153840	.	+	.	ID=RLOC_00020552;geneIDs=FBgn0014366.1.path1;transcripts=FBgn0014366.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111152274	111153840	.	+	.	ID=FBgn0014366.1.mrna1;geneID=FBgn0014366.1.path1;Name=FBgn0014366.1;Dir=sensecoverage=100.0;identity=100.0;matches=1512;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020552
Chr2	stalkie_big_nohaplotig	exon	111152274	111152955	100	+	.	Parent=FBgn0014366.1.mrna1;Target=FBgn0014366.1 1 682 +
Chr2	stalkie_big_nohaplotig	exon	111153011	111153840	100	+	.	Parent=FBgn0014366.1.mrna1;Target=FBgn0014366.1 683 1512 +
Chr2	stalkie_big_nohaplotig	CDS	111152274	111152955	.	+	0	Parent=FBgn0014366.1.mrna1;Target=FBgn0014366.1 1 682 +
Chr2	stalkie_big_nohaplotig	CDS	111153011	111153840	.	+	2	Parent=FBgn0014366.1.mrna1;Target=FBgn0014366.1 683 1512 +
Chr2	gffcl	locus	111155618	111157063	.	-	.	ID=RLOC_00020554;geneIDs=FBgn0040340.1.path1;transcripts=FBgn0040340.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111155618	111157063	.	-	.	ID=FBgn0040340.1.mrna1;geneID=FBgn0040340.1.path1;Name=FBgn0040340.1;Dir=sensecoverage=100.0;identity=100.0;matches=1101;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020554
Chr2	stalkie_big_nohaplotig	exon	111155618	111156035	100	-	.	Parent=FBgn0040340.1.mrna1;Target=FBgn0040340.1 684 1101 +
Chr2	stalkie_big_nohaplotig	exon	111156102	111156433	100	-	.	Parent=FBgn0040340.1.mrna1;Target=FBgn0040340.1 352 683 +
Chr2	stalkie_big_nohaplotig	exon	111156499	111156607	100	-	.	Parent=FBgn0040340.1.mrna1;Target=FBgn0040340.1 243 351 +
Chr2	stalkie_big_nohaplotig	exon	111156740	111156819	100	-	.	Parent=FBgn0040340.1.mrna1;Target=FBgn0040340.1 163 242 +
Chr2	stalkie_big_nohaplotig	exon	111156902	111157063	100	-	.	Parent=FBgn0040340.1.mrna1;Target=FBgn0040340.1 1 162 +
Chr2	stalkie_big_nohaplotig	CDS	111155618	111156035	.	-	1	Parent=FBgn0040340.1.mrna1;Target=FBgn0040340.1 684 1101 +
Chr2	stalkie_big_nohaplotig	CDS	111156102	111156433	.	-	0	Parent=FBgn0040340.1.mrna1;Target=FBgn0040340.1 352 683 +
Chr2	stalkie_big_nohaplotig	CDS	111156499	111156607	.	-	1	Parent=FBgn0040340.1.mrna1;Target=FBgn0040340.1 243 351 +
Chr2	stalkie_big_nohaplotig	CDS	111156740	111156819	.	-	0	Parent=FBgn0040340.1.mrna1;Target=FBgn0040340.1 163 242 +
Chr2	stalkie_big_nohaplotig	CDS	111156902	111157063	.	-	0	Parent=FBgn0040340.1.mrna1;Target=FBgn0040340.1 1 162 +
Chr2	gffcl	locus	111162527	111165776	.	+	.	ID=RLOC_00020555;geneIDs=FBgn0038593.1.path1;transcripts=FBgn0038593.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111162527	111165776	.	+	.	ID=FBgn0038593.1.mrna1;geneID=FBgn0038593.1.path1;Name=FBgn0038593.1;Dir=sensecoverage=100.0;identity=100.0;matches=2682;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020555
Chr2	stalkie_big_nohaplotig	exon	111162527	111162608	100	+	.	Parent=FBgn0038593.1.mrna1;Target=FBgn0038593.1 1 82 +
Chr2	stalkie_big_nohaplotig	exon	111162661	111162929	100	+	.	Parent=FBgn0038593.1.mrna1;Target=FBgn0038593.1 83 351 +
Chr2	stalkie_big_nohaplotig	exon	111162989	111163192	100	+	.	Parent=FBgn0038593.1.mrna1;Target=FBgn0038593.1 352 555 +
Chr2	stalkie_big_nohaplotig	exon	111163254	111163515	100	+	.	Parent=FBgn0038593.1.mrna1;Target=FBgn0038593.1 556 817 +
Chr2	stalkie_big_nohaplotig	exon	111163576	111163835	100	+	.	Parent=FBgn0038593.1.mrna1;Target=FBgn0038593.1 818 1077 +
Chr2	stalkie_big_nohaplotig	exon	111163893	111164285	100	+	.	Parent=FBgn0038593.1.mrna1;Target=FBgn0038593.1 1078 1470 +
Chr2	stalkie_big_nohaplotig	exon	111164422	111164930	100	+	.	Parent=FBgn0038593.1.mrna1;Target=FBgn0038593.1 1471 1979 +
Chr2	stalkie_big_nohaplotig	exon	111164990	111165392	100	+	.	Parent=FBgn0038593.1.mrna1;Target=FBgn0038593.1 1980 2382 +
Chr2	stalkie_big_nohaplotig	exon	111165477	111165776	100	+	.	Parent=FBgn0038593.1.mrna1;Target=FBgn0038593.1 2383 2682 +
Chr2	stalkie_big_nohaplotig	CDS	111162527	111162608	.	+	0	Parent=FBgn0038593.1.mrna1;Target=FBgn0038593.1 1 82 +
Chr2	stalkie_big_nohaplotig	CDS	111162661	111162929	.	+	2	Parent=FBgn0038593.1.mrna1;Target=FBgn0038593.1 83 351 +
Chr2	stalkie_big_nohaplotig	CDS	111162989	111163192	.	+	0	Parent=FBgn0038593.1.mrna1;Target=FBgn0038593.1 352 555 +
Chr2	stalkie_big_nohaplotig	CDS	111163254	111163515	.	+	0	Parent=FBgn0038593.1.mrna1;Target=FBgn0038593.1 556 817 +
Chr2	stalkie_big_nohaplotig	CDS	111163576	111163835	.	+	2	Parent=FBgn0038593.1.mrna1;Target=FBgn0038593.1 818 1077 +
Chr2	stalkie_big_nohaplotig	CDS	111163893	111164285	.	+	0	Parent=FBgn0038593.1.mrna1;Target=FBgn0038593.1 1078 1470 +
Chr2	stalkie_big_nohaplotig	CDS	111164422	111164930	.	+	0	Parent=FBgn0038593.1.mrna1;Target=FBgn0038593.1 1471 1979 +
Chr2	stalkie_big_nohaplotig	CDS	111164990	111165392	.	+	1	Parent=FBgn0038593.1.mrna1;Target=FBgn0038593.1 1980 2382 +
Chr2	stalkie_big_nohaplotig	CDS	111165477	111165776	.	+	0	Parent=FBgn0038593.1.mrna1;Target=FBgn0038593.1 2383 2682 +
Chr2	gffcl	locus	111167491	111177834	.	+	.	ID=RLOC_00020556;geneIDs=FBgn0037897.1.path1;transcripts=FBgn0037897.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111167491	111177834	.	+	.	ID=FBgn0037897.1.mrna1;geneID=FBgn0037897.1.path1;Name=FBgn0037897.1;Dir=sensecoverage=100.0;identity=100.0;matches=6848;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020556
Chr2	stalkie_big_nohaplotig	exon	111167491	111167565	100	+	.	Parent=FBgn0037897.1.mrna1;Target=FBgn0037897.1 1 75 +
Chr2	stalkie_big_nohaplotig	exon	111167633	111168420	100	+	.	Parent=FBgn0037897.1.mrna1;Target=FBgn0037897.1 76 863 +
Chr2	stalkie_big_nohaplotig	exon	111168479	111169523	99	+	.	Parent=FBgn0037897.1.mrna1;Target=FBgn0037897.1 864 1908 +
Chr2	stalkie_big_nohaplotig	exon	111170919	111172200	100	+	.	Parent=FBgn0037897.1.mrna1;Target=FBgn0037897.1 1909 3190 +
Chr2	stalkie_big_nohaplotig	exon	111173007	111174742	100	+	.	Parent=FBgn0037897.1.mrna1;Target=FBgn0037897.1 3191 4926 +
Chr2	stalkie_big_nohaplotig	exon	111174890	111175148	100	+	.	Parent=FBgn0037897.1.mrna1;Target=FBgn0037897.1 4927 5185 +
Chr2	stalkie_big_nohaplotig	exon	111175248	111175792	100	+	.	Parent=FBgn0037897.1.mrna1;Target=FBgn0037897.1 5186 5730 +
Chr2	stalkie_big_nohaplotig	exon	111175851	111176417	100	+	.	Parent=FBgn0037897.1.mrna1;Target=FBgn0037897.1 5731 6297 +
Chr2	stalkie_big_nohaplotig	exon	111177221	111177339	100	+	.	Parent=FBgn0037897.1.mrna1;Target=FBgn0037897.1 6298 6416 +
Chr2	stalkie_big_nohaplotig	exon	111177402	111177834	100	+	.	Parent=FBgn0037897.1.mrna1;Target=FBgn0037897.1 6417 6849 +
Chr2	stalkie_big_nohaplotig	CDS	111167491	111167565	.	+	0	Parent=FBgn0037897.1.mrna1;Target=FBgn0037897.1 1 75 +
Chr2	stalkie_big_nohaplotig	CDS	111167633	111168420	.	+	0	Parent=FBgn0037897.1.mrna1;Target=FBgn0037897.1 76 863 +
Chr2	stalkie_big_nohaplotig	CDS	111168479	111169523	.	+	1	Parent=FBgn0037897.1.mrna1;Target=FBgn0037897.1 864 1908 +
Chr2	stalkie_big_nohaplotig	CDS	111170919	111172200	.	+	0	Parent=FBgn0037897.1.mrna1;Target=FBgn0037897.1 1909 3190 +
Chr2	stalkie_big_nohaplotig	CDS	111173007	111174742	.	+	2	Parent=FBgn0037897.1.mrna1;Target=FBgn0037897.1 3191 4926 +
Chr2	stalkie_big_nohaplotig	CDS	111174890	111175148	.	+	0	Parent=FBgn0037897.1.mrna1;Target=FBgn0037897.1 4927 5185 +
Chr2	stalkie_big_nohaplotig	CDS	111175248	111175792	.	+	2	Parent=FBgn0037897.1.mrna1;Target=FBgn0037897.1 5186 5730 +
Chr2	stalkie_big_nohaplotig	CDS	111175851	111176417	.	+	0	Parent=FBgn0037897.1.mrna1;Target=FBgn0037897.1 5731 6297 +
Chr2	stalkie_big_nohaplotig	CDS	111177221	111177339	.	+	0	Parent=FBgn0037897.1.mrna1;Target=FBgn0037897.1 6298 6416 +
Chr2	stalkie_big_nohaplotig	CDS	111177402	111177834	.	+	1	Parent=FBgn0037897.1.mrna1;Target=FBgn0037897.1 6417 6849 +
Chr2	gffcl	locus	111180290	111183582	.	-	.	ID=RLOC_00020557;geneIDs=comp149918_c2_seq1.path1;transcripts=comp149918_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111180290	111183582	.	-	.	ID=comp149918_c2_seq1.mrna1;geneID=comp149918_c2_seq1.path1;Name=comp149918_c2_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=1085;mismatches=3;indels=0;unknowns=0;locus=RLOC_00020557
Chr2	stalkie_big_nohaplotig	exon	111180290	111180810	99	-	.	Parent=comp149918_c2_seq1.mrna1;Target=comp149918_c2_seq1 1 521 -
Chr2	stalkie_big_nohaplotig	exon	111183016	111183582	99	-	.	Parent=comp149918_c2_seq1.mrna1;Target=comp149918_c2_seq1 522 1088 -
Chr2	stalkie_big_nohaplotig	CDS	111180359	111180810	.	-	2	Parent=comp149918_c2_seq1.mrna1;Target=comp149918_c2_seq1 70 521 .
Chr2	stalkie_big_nohaplotig	CDS	111183016	111183580	.	-	0	Parent=comp149918_c2_seq1.mrna1;Target=comp149918_c2_seq1 522 1086 .
Chr2	gffcl	locus	111208358	111209125	.	+	.	ID=RLOC_00020558;geneIDs=comp144845_c1_seq1.path1;transcripts=comp144845_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111208358	111209125	.	+	.	ID=comp144845_c1_seq1.mrna1;geneID=comp144845_c1_seq1.path1;Name=comp144845_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=765;mismatches=2;indels=3;unknowns=0;Target=comp144845_c1_seq1 769 1 .;CDS_Target=comp144845_c1_seq1 74 3 .;locus=RLOC_00020558
Chr2	stalkie_big_nohaplotig	exon	111208358	111209125	99	+	.	Parent=comp144845_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111208360	111208431	.	+	0	Parent=comp144845_c1_seq1.mrna1
Chr2	gffcl	locus	111219989	111220609	.	-	.	ID=RLOC_00020559;geneIDs=Dv_FBgn0209655.1.path1;transcripts=Dv_FBgn0209655.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111219989	111220609	.	-	.	ID=Dv_FBgn0209655.1.mrna1;geneID=Dv_FBgn0209655.1.path1;Name=Dv_FBgn0209655.1;Dir=sensecoverage=100.0;identity=100.0;matches=567;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020559
Chr2	stalkie_big_nohaplotig	exon	111219989	111220316	100	-	.	Parent=Dv_FBgn0209655.1.mrna1;Target=Dv_FBgn0209655.1 240 567 +
Chr2	stalkie_big_nohaplotig	exon	111220371	111220609	100	-	.	Parent=Dv_FBgn0209655.1.mrna1;Target=Dv_FBgn0209655.1 1 239 +
Chr2	stalkie_big_nohaplotig	CDS	111219989	111220316	.	-	1	Parent=Dv_FBgn0209655.1.mrna1;Target=Dv_FBgn0209655.1 240 567 +
Chr2	stalkie_big_nohaplotig	CDS	111220371	111220609	.	-	0	Parent=Dv_FBgn0209655.1.mrna1;Target=Dv_FBgn0209655.1 1 239 +
Chr2	gffcl	locus	111222295	111224283	.	+	.	ID=RLOC_00020560;geneIDs=FBgn0263738.1.path1;transcripts=FBgn0263738.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111222295	111224283	.	+	.	ID=FBgn0263738.1.mrna1;geneID=FBgn0263738.1.path1;Name=FBgn0263738.1;Dir=sensecoverage=100.0;identity=99.8;matches=1683;mismatches=1;indels=2;unknowns=0;locus=RLOC_00020560
Chr2	stalkie_big_nohaplotig	exon	111222295	111222536	98	+	.	Parent=FBgn0263738.1.mrna1;Target=FBgn0263738.1 1 244 +
Chr2	stalkie_big_nohaplotig	exon	111222671	111223439	100	+	.	Parent=FBgn0263738.1.mrna1;Target=FBgn0263738.1 245 1013 +
Chr2	stalkie_big_nohaplotig	exon	111223498	111223710	100	+	.	Parent=FBgn0263738.1.mrna1;Target=FBgn0263738.1 1014 1226 +
Chr2	stalkie_big_nohaplotig	exon	111223764	111223996	100	+	.	Parent=FBgn0263738.1.mrna1;Target=FBgn0263738.1 1227 1459 +
Chr2	stalkie_big_nohaplotig	exon	111224057	111224283	100	+	.	Parent=FBgn0263738.1.mrna1;Target=FBgn0263738.1 1460 1686 +
Chr2	stalkie_big_nohaplotig	CDS	111222473	111222536	.	+	0	Parent=FBgn0263738.1.mrna1;Target=FBgn0263738.1 181 244 +
Chr2	stalkie_big_nohaplotig	CDS	111222671	111223439	.	+	2	Parent=FBgn0263738.1.mrna1;Target=FBgn0263738.1 245 1013 +
Chr2	stalkie_big_nohaplotig	CDS	111223498	111223710	.	+	1	Parent=FBgn0263738.1.mrna1;Target=FBgn0263738.1 1014 1226 +
Chr2	stalkie_big_nohaplotig	CDS	111223764	111223996	.	+	1	Parent=FBgn0263738.1.mrna1;Target=FBgn0263738.1 1227 1459 +
Chr2	stalkie_big_nohaplotig	CDS	111224057	111224283	.	+	2	Parent=FBgn0263738.1.mrna1;Target=FBgn0263738.1 1460 1686 +
Chr2	gffcl	locus	111227400	111227748	.	-	.	ID=RLOC_00020561;geneIDs=FBgn0038589.1.path1;transcripts=FBgn0038589.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111227400	111227748	.	-	.	ID=FBgn0038589.1.mrna1;geneID=FBgn0038589.1.path1;Name=FBgn0038589.1;Dir=sensecoverage=100.0;identity=100.0;matches=297;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020561
Chr2	stalkie_big_nohaplotig	exon	111227400	111227531	100	-	.	Parent=FBgn0038589.1.mrna1;Target=FBgn0038589.1 166 297 +
Chr2	stalkie_big_nohaplotig	exon	111227584	111227748	100	-	.	Parent=FBgn0038589.1.mrna1;Target=FBgn0038589.1 1 165 +
Chr2	stalkie_big_nohaplotig	CDS	111227400	111227531	.	-	0	Parent=FBgn0038589.1.mrna1;Target=FBgn0038589.1 166 297 +
Chr2	stalkie_big_nohaplotig	CDS	111227584	111227748	.	-	0	Parent=FBgn0038589.1.mrna1;Target=FBgn0038589.1 1 165 +
Chr2	gffcl	locus	111230374	111235016	.	-	.	ID=RLOC_00020562;geneIDs=FBgn0037623.1.path1;transcripts=FBgn0037623.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111230374	111235016	.	-	.	ID=FBgn0037623.1.mrna1;geneID=FBgn0037623.1.path1;Name=FBgn0037623.1;Dir=sensecoverage=100.0;identity=100.0;matches=2496;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020562
Chr2	stalkie_big_nohaplotig	exon	111230374	111231389	100	-	.	Parent=FBgn0037623.1.mrna1;Target=FBgn0037623.1 1481 2496 +
Chr2	stalkie_big_nohaplotig	exon	111231451	111231777	100	-	.	Parent=FBgn0037623.1.mrna1;Target=FBgn0037623.1 1154 1480 +
Chr2	stalkie_big_nohaplotig	exon	111231836	111232848	100	-	.	Parent=FBgn0037623.1.mrna1;Target=FBgn0037623.1 141 1153 +
Chr2	stalkie_big_nohaplotig	exon	111234877	111235016	100	-	.	Parent=FBgn0037623.1.mrna1;Target=FBgn0037623.1 1 140 +
Chr2	stalkie_big_nohaplotig	CDS	111230374	111231389	.	-	2	Parent=FBgn0037623.1.mrna1;Target=FBgn0037623.1 1481 2496 +
Chr2	stalkie_big_nohaplotig	CDS	111231451	111231777	.	-	2	Parent=FBgn0037623.1.mrna1;Target=FBgn0037623.1 1154 1480 +
Chr2	stalkie_big_nohaplotig	CDS	111231836	111232848	.	-	1	Parent=FBgn0037623.1.mrna1;Target=FBgn0037623.1 141 1153 +
Chr2	stalkie_big_nohaplotig	CDS	111234877	111235016	.	-	0	Parent=FBgn0037623.1.mrna1;Target=FBgn0037623.1 1 140 +
Chr2	gffcl	locus	111254306	111255192	.	+	.	ID=RLOC_00020563;geneIDs=comp121589_c0_seq1.path1;transcripts=comp121589_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111254306	111255192	.	+	.	ID=comp121589_c0_seq1.mrna1;geneID=comp121589_c0_seq1.path1;Name=comp121589_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=721;mismatches=0;indels=0;unknowns=0;Target=comp121589_c0_seq1 629 721 .;locus=RLOC_00020563
Chr2	stalkie_big_nohaplotig	exon	111254306	111254639	100	+	.	Parent=comp121589_c0_seq1.mrna1;Target=comp121589_c0_seq1 388 721 -
Chr2	stalkie_big_nohaplotig	exon	111254806	111255192	100	+	.	Parent=comp121589_c0_seq1.mrna1;Target=comp121589_c0_seq1 1 387 -
Chr2	stalkie_big_nohaplotig	CDS	111254306	111254398	.	+	0	Parent=comp121589_c0_seq1.mrna1
Chr2	gffcl	locus	111260914	111265375	.	-	.	ID=RLOC_00020564;geneIDs=comp148572_c0_seq1.path1;transcripts=comp148572_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111260914	111265375	.	-	.	ID=comp148572_c0_seq1.mrna1;geneID=comp148572_c0_seq1.path1;Name=comp148572_c0_seq1;Dir=indeterminatecoverage=55.7;identity=100.0;matches=1751;mismatches=0;indels=0;unknowns=0;Target=comp148572_c0_seq1 2653 2537 .;locus=RLOC_00020564
Chr2	stalkie_big_nohaplotig	exon	111260914	111262654	100	-	.	Parent=comp148572_c0_seq1.mrna1;Target=comp148572_c0_seq1 3315 1575 .
Chr2	stalkie_big_nohaplotig	exon	111265282	111265283	100	-	.	Parent=comp148572_c0_seq1.mrna1;Target=comp148572_c0_seq1 1574 1573 .
Chr2	stalkie_big_nohaplotig	exon	111265368	111265375	100	-	.	Parent=comp148572_c0_seq1.mrna1;Target=comp148572_c0_seq1 1475 1468 .
Chr2	stalkie_big_nohaplotig	CDS	111261576	111261692	.	-	0	Parent=comp148572_c0_seq1.mrna1
Chr2	gffcl	locus	111263028	111272942	.	-	.	ID=RLOC_00020565;geneIDs=FBgn0037625.1.path1,comp157835_c1_seq1.path1;transcripts=comp157835_c1_seq1.mrna1,FBgn0037625.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111263028	111272942	.	-	.	ID=comp157835_c1_seq1.mrna1;geneID=comp157835_c1_seq1.path1;Name=comp157835_c1_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=2453;mismatches=0;indels=1;unknowns=0;Target=comp157835_c1_seq1 1812 2453 .;locus=RLOC_00020565
Chr2	stalkie_big_nohaplotig	exon	111263028	111263579	100	-	.	Parent=comp157835_c1_seq1.mrna1;Target=comp157835_c1_seq1 1 552 -
Chr2	stalkie_big_nohaplotig	exon	111263668	111263805	100	-	.	Parent=comp157835_c1_seq1.mrna1;Target=comp157835_c1_seq1 553 690 -
Chr2	stalkie_big_nohaplotig	exon	111269741	111269977	100	-	.	Parent=comp157835_c1_seq1.mrna1;Target=comp157835_c1_seq1 691 927 -
Chr2	stalkie_big_nohaplotig	exon	111271417	111272942	99	-	.	Parent=comp157835_c1_seq1.mrna1;Target=comp157835_c1_seq1 928 2454 -
Chr2	stalkie_big_nohaplotig	CDS	111272301	111272941	.	-	0	Parent=comp157835_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111269676	111272394	.	-	.	ID=FBgn0037625.1.mrna1;geneID=FBgn0037625.1.path1;Name=FBgn0037625.1;Dir=sensecoverage=100.0;identity=99.9;matches=1280;mismatches=0;indels=1;unknowns=0;Target=FBgn0037625.1 3 95 +;locus=RLOC_00020565
Chr2	stalkie_big_nohaplotig	exon	111269676	111269977	100	-	.	Parent=FBgn0037625.1.mrna1;Target=FBgn0037625.1 980 1281 +
Chr2	stalkie_big_nohaplotig	exon	111271417	111272394	99	-	.	Parent=FBgn0037625.1.mrna1;Target=FBgn0037625.1 1 979 +
Chr2	stalkie_big_nohaplotig	CDS	111272301	111272392	.	-	0	Parent=FBgn0037625.1.mrna1
Chr2	gffcl	locus	111267105	111268710	.	+	.	ID=RLOC_00020566;geneIDs=FBgn0037624.1.path1;transcripts=FBgn0037624.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111267105	111268710	.	+	.	ID=FBgn0037624.1.mrna1;geneID=FBgn0037624.1.path1;Name=FBgn0037624.1;Dir=sensecoverage=100.0;identity=100.0;matches=1311;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020566
Chr2	stalkie_big_nohaplotig	exon	111267105	111267343	100	+	.	Parent=FBgn0037624.1.mrna1;Target=FBgn0037624.1 1 239 +
Chr2	stalkie_big_nohaplotig	exon	111267402	111267807	100	+	.	Parent=FBgn0037624.1.mrna1;Target=FBgn0037624.1 240 645 +
Chr2	stalkie_big_nohaplotig	exon	111267880	111268039	100	+	.	Parent=FBgn0037624.1.mrna1;Target=FBgn0037624.1 646 805 +
Chr2	stalkie_big_nohaplotig	exon	111268135	111268412	100	+	.	Parent=FBgn0037624.1.mrna1;Target=FBgn0037624.1 806 1083 +
Chr2	stalkie_big_nohaplotig	exon	111268483	111268710	100	+	.	Parent=FBgn0037624.1.mrna1;Target=FBgn0037624.1 1084 1311 +
Chr2	stalkie_big_nohaplotig	CDS	111267105	111267343	.	+	0	Parent=FBgn0037624.1.mrna1;Target=FBgn0037624.1 1 239 +
Chr2	stalkie_big_nohaplotig	CDS	111267402	111267807	.	+	1	Parent=FBgn0037624.1.mrna1;Target=FBgn0037624.1 240 645 +
Chr2	stalkie_big_nohaplotig	CDS	111267880	111268039	.	+	0	Parent=FBgn0037624.1.mrna1;Target=FBgn0037624.1 646 805 +
Chr2	stalkie_big_nohaplotig	CDS	111268135	111268412	.	+	2	Parent=FBgn0037624.1.mrna1;Target=FBgn0037624.1 806 1083 +
Chr2	stalkie_big_nohaplotig	CDS	111268483	111268710	.	+	0	Parent=FBgn0037624.1.mrna1;Target=FBgn0037624.1 1084 1311 +
Chr2	gffcl	locus	111298810	111299631	.	-	.	ID=RLOC_00020567;geneIDs=FBgn0053113.3.path1;transcripts=FBgn0053113.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111298810	111299631	.	-	.	ID=FBgn0053113.3.mrna1;geneID=FBgn0053113.3.path1;Name=FBgn0053113.3;Dir=indeterminatecoverage=100.0;identity=100.0;matches=822;mismatches=0;indels=0;unknowns=0;Target=FBgn0053113.3 822 1 .;locus=RLOC_00020567
Chr2	stalkie_big_nohaplotig	exon	111298810	111299631	100	-	.	Parent=FBgn0053113.3.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111298810	111299631	.	-	0	Parent=FBgn0053113.3.mrna1
Chr2	gffcl	locus	111299711	111302744	.	-	.	ID=RLOC_00020568;geneIDs=FBgn0037627.1.path1;transcripts=FBgn0037627.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111299711	111302744	.	-	.	ID=FBgn0037627.1.mrna1;geneID=FBgn0037627.1.path1;Name=FBgn0037627.1;Dir=sensecoverage=100.0;identity=100.0;matches=1179;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020568
Chr2	stalkie_big_nohaplotig	exon	111299711	111299866	100	-	.	Parent=FBgn0037627.1.mrna1;Target=FBgn0037627.1 1024 1179 +
Chr2	stalkie_big_nohaplotig	exon	111299959	111300388	100	-	.	Parent=FBgn0037627.1.mrna1;Target=FBgn0037627.1 594 1023 +
Chr2	stalkie_big_nohaplotig	exon	111300465	111300721	100	-	.	Parent=FBgn0037627.1.mrna1;Target=FBgn0037627.1 337 593 +
Chr2	stalkie_big_nohaplotig	exon	111300780	111300931	100	-	.	Parent=FBgn0037627.1.mrna1;Target=FBgn0037627.1 185 336 +
Chr2	stalkie_big_nohaplotig	exon	111302561	111302744	100	-	.	Parent=FBgn0037627.1.mrna1;Target=FBgn0037627.1 1 184 +
Chr2	stalkie_big_nohaplotig	CDS	111299711	111299866	.	-	0	Parent=FBgn0037627.1.mrna1;Target=FBgn0037627.1 1024 1179 +
Chr2	stalkie_big_nohaplotig	CDS	111299959	111300388	.	-	1	Parent=FBgn0037627.1.mrna1;Target=FBgn0037627.1 594 1023 +
Chr2	stalkie_big_nohaplotig	CDS	111300465	111300721	.	-	0	Parent=FBgn0037627.1.mrna1;Target=FBgn0037627.1 337 593 +
Chr2	stalkie_big_nohaplotig	CDS	111300780	111300931	.	-	2	Parent=FBgn0037627.1.mrna1;Target=FBgn0037627.1 185 336 +
Chr2	stalkie_big_nohaplotig	CDS	111302561	111302744	.	-	0	Parent=FBgn0037627.1.mrna1;Target=FBgn0037627.1 1 184 +
Chr2	gffcl	locus	111305640	111306499	.	+	.	ID=RLOC_00020569;geneIDs=FBgn0053113.1.path1;transcripts=FBgn0053113.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111305640	111306499	.	+	.	ID=FBgn0053113.1.mrna1;geneID=FBgn0053113.1.path1;Name=FBgn0053113.1;Dir=indeterminatecoverage=99.5;identity=100.0;matches=860;mismatches=0;indels=0;unknowns=0;Target=FBgn0053113.1 864 5 .;CDS_Target=FBgn0053113.1 864 7 .;locus=RLOC_00020569
Chr2	stalkie_big_nohaplotig	exon	111305640	111306499	100	+	.	Parent=FBgn0053113.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111305642	111306499	.	+	0	Parent=FBgn0053113.1.mrna1
Chr2	gffcl	locus	111311626	111315981	.	+	.	ID=RLOC_00020570;geneIDs=comp144629_c0_seq1.path1;transcripts=comp144629_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111311626	111315981	.	+	.	ID=comp144629_c0_seq1.mrna1;geneID=comp144629_c0_seq1.path1;Name=comp144629_c0_seq1;Dir=sensecoverage=98.6;identity=99.7;matches=1498;mismatches=4;indels=0;unknowns=0;locus=RLOC_00020570
Chr2	stalkie_big_nohaplotig	exon	111311626	111312016	100	+	.	Parent=comp144629_c0_seq1.mrna1;Target=comp144629_c0_seq1 4 394 +
Chr2	stalkie_big_nohaplotig	exon	111314804	111314909	100	+	.	Parent=comp144629_c0_seq1.mrna1;Target=comp144629_c0_seq1 395 500 +
Chr2	stalkie_big_nohaplotig	exon	111314977	111315981	99	+	.	Parent=comp144629_c0_seq1.mrna1;Target=comp144629_c0_seq1 501 1505 +
Chr2	stalkie_big_nohaplotig	CDS	111312010	111312016	.	+	0	Parent=comp144629_c0_seq1.mrna1;Target=comp144629_c0_seq1 388 394 +
Chr2	stalkie_big_nohaplotig	CDS	111314804	111314909	.	+	2	Parent=comp144629_c0_seq1.mrna1;Target=comp144629_c0_seq1 395 500 +
Chr2	stalkie_big_nohaplotig	CDS	111314977	111315064	.	+	1	Parent=comp144629_c0_seq1.mrna1;Target=comp144629_c0_seq1 501 588 +
Chr2	gffcl	locus	111341572	111343688	.	+	.	ID=RLOC_00020571;geneIDs=FBgn0038420.1.path1;transcripts=FBgn0038420.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111341572	111343688	.	+	.	ID=FBgn0038420.1.mrna1;geneID=FBgn0038420.1.path1;Name=FBgn0038420.1;Dir=sensecoverage=100.0;identity=100.0;matches=525;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020571
Chr2	stalkie_big_nohaplotig	exon	111341572	111341844	100	+	.	Parent=FBgn0038420.1.mrna1;Target=FBgn0038420.1 1 273 +
Chr2	stalkie_big_nohaplotig	exon	111341925	111342078	100	+	.	Parent=FBgn0038420.1.mrna1;Target=FBgn0038420.1 274 427 +
Chr2	stalkie_big_nohaplotig	exon	111343591	111343688	100	+	.	Parent=FBgn0038420.1.mrna1;Target=FBgn0038420.1 428 525 +
Chr2	stalkie_big_nohaplotig	CDS	111341572	111341844	.	+	0	Parent=FBgn0038420.1.mrna1;Target=FBgn0038420.1 1 273 +
Chr2	stalkie_big_nohaplotig	CDS	111341925	111342078	.	+	0	Parent=FBgn0038420.1.mrna1;Target=FBgn0038420.1 274 427 +
Chr2	stalkie_big_nohaplotig	CDS	111343591	111343688	.	+	2	Parent=FBgn0038420.1.mrna1;Target=FBgn0038420.1 428 525 +
Chr2	gffcl	locus	111344257	111346447	.	-	.	ID=RLOC_00020572;geneIDs=FBgn0027095.1.path1;transcripts=FBgn0027095.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111344257	111346447	.	-	.	ID=FBgn0027095.1.mrna1;geneID=FBgn0027095.1.path1;Name=FBgn0027095.1;Dir=sensecoverage=99.3;identity=100.0;matches=533;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020572
Chr2	stalkie_big_nohaplotig	exon	111344257	111344420	100	-	.	Parent=FBgn0027095.1.mrna1;Target=FBgn0027095.1 374 537 +
Chr2	stalkie_big_nohaplotig	exon	111345850	111345991	100	-	.	Parent=FBgn0027095.1.mrna1;Target=FBgn0027095.1 232 373 +
Chr2	stalkie_big_nohaplotig	exon	111346153	111346277	100	-	.	Parent=FBgn0027095.1.mrna1;Target=FBgn0027095.1 107 231 +
Chr2	stalkie_big_nohaplotig	exon	111346346	111346447	100	-	.	Parent=FBgn0027095.1.mrna1;Target=FBgn0027095.1 5 106 +
Chr2	stalkie_big_nohaplotig	CDS	111344257	111344420	.	-	2	Parent=FBgn0027095.1.mrna1;Target=FBgn0027095.1 374 537 +
Chr2	stalkie_big_nohaplotig	CDS	111345850	111345991	.	-	0	Parent=FBgn0027095.1.mrna1;Target=FBgn0027095.1 232 373 +
Chr2	stalkie_big_nohaplotig	CDS	111346153	111346277	.	-	2	Parent=FBgn0027095.1.mrna1;Target=FBgn0027095.1 107 231 +
Chr2	stalkie_big_nohaplotig	CDS	111346346	111346445	.	-	0	Parent=FBgn0027095.1.mrna1;Target=FBgn0027095.1 7 106 +
Chr2	gffcl	locus	111350933	111352134	.	+	.	ID=RLOC_00020573;geneIDs=Dv_FBgn0207555.1.path1;transcripts=Dv_FBgn0207555.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111350933	111352134	.	+	.	ID=Dv_FBgn0207555.1.mrna1;geneID=Dv_FBgn0207555.1.path1;Name=Dv_FBgn0207555.1;Dir=sensecoverage=100.0;identity=99.7;matches=936;mismatches=3;indels=0;unknowns=0;locus=RLOC_00020573
Chr2	stalkie_big_nohaplotig	exon	111350933	111351052	97	+	.	Parent=Dv_FBgn0207555.1.mrna1;Target=Dv_FBgn0207555.1 1 120 +
Chr2	stalkie_big_nohaplotig	exon	111351262	111351497	100	+	.	Parent=Dv_FBgn0207555.1.mrna1;Target=Dv_FBgn0207555.1 121 356 +
Chr2	stalkie_big_nohaplotig	exon	111351552	111352134	100	+	.	Parent=Dv_FBgn0207555.1.mrna1;Target=Dv_FBgn0207555.1 357 939 +
Chr2	stalkie_big_nohaplotig	CDS	111350933	111351052	.	+	0	Parent=Dv_FBgn0207555.1.mrna1;Target=Dv_FBgn0207555.1 1 120 +
Chr2	stalkie_big_nohaplotig	CDS	111351262	111351497	.	+	0	Parent=Dv_FBgn0207555.1.mrna1;Target=Dv_FBgn0207555.1 121 356 +
Chr2	stalkie_big_nohaplotig	CDS	111351552	111352134	.	+	1	Parent=Dv_FBgn0207555.1.mrna1;Target=Dv_FBgn0207555.1 357 939 +
Chr2	gffcl	locus	111359717	111371153	.	-	.	ID=RLOC_00020574;geneIDs=FBgn0010051.1.path1;transcripts=FBgn0010051.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111359717	111371153	.	-	.	ID=FBgn0010051.1.mrna1;geneID=FBgn0010051.1.path1;Name=FBgn0010051.1;Dir=sensecoverage=100.0;identity=99.9;matches=6935;mismatches=3;indels=1;unknowns=0;locus=RLOC_00020574
Chr2	stalkie_big_nohaplotig	exon	111359717	111359741	100	-	.	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 6915 6939 +
Chr2	stalkie_big_nohaplotig	exon	111359805	111359997	99	-	.	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 6721 6914 +
Chr2	stalkie_big_nohaplotig	exon	111360058	111360647	100	-	.	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 6131 6720 +
Chr2	stalkie_big_nohaplotig	exon	111360715	111361542	99	-	.	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 5303 6130 +
Chr2	stalkie_big_nohaplotig	exon	111361601	111362945	100	-	.	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 3958 5302 +
Chr2	stalkie_big_nohaplotig	exon	111363965	111364197	100	-	.	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 3725 3957 +
Chr2	stalkie_big_nohaplotig	exon	111364257	111364385	100	-	.	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 3596 3724 +
Chr2	stalkie_big_nohaplotig	exon	111364438	111364573	100	-	.	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 3460 3595 +
Chr2	stalkie_big_nohaplotig	exon	111364923	111365473	100	-	.	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 2909 3459 +
Chr2	stalkie_big_nohaplotig	exon	111366309	111366465	100	-	.	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 2752 2908 +
Chr2	stalkie_big_nohaplotig	exon	111366527	111366680	100	-	.	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 2598 2751 +
Chr2	stalkie_big_nohaplotig	exon	111366744	111366899	100	-	.	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 2442 2597 +
Chr2	stalkie_big_nohaplotig	exon	111366957	111367132	100	-	.	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 2266 2441 +
Chr2	stalkie_big_nohaplotig	exon	111367197	111367691	100	-	.	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 1771 2265 +
Chr2	stalkie_big_nohaplotig	exon	111367759	111368232	100	-	.	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 1297 1770 +
Chr2	stalkie_big_nohaplotig	exon	111369500	111369714	99	-	.	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 1082 1296 +
Chr2	stalkie_big_nohaplotig	exon	111369775	111370537	100	-	.	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 319 1081 +
Chr2	stalkie_big_nohaplotig	exon	111370610	111370725	100	-	.	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 203 318 +
Chr2	stalkie_big_nohaplotig	exon	111370804	111370874	100	-	.	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 132 202 +
Chr2	stalkie_big_nohaplotig	exon	111371023	111371153	100	-	.	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 1 131 +
Chr2	stalkie_big_nohaplotig	CDS	111359717	111359741	.	-	2	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 6915 6939 +
Chr2	stalkie_big_nohaplotig	CDS	111359805	111359997	.	-	0	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 6721 6914 +
Chr2	stalkie_big_nohaplotig	CDS	111360058	111360647	.	-	2	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 6131 6720 +
Chr2	stalkie_big_nohaplotig	CDS	111360715	111361542	.	-	2	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 5303 6130 +
Chr2	stalkie_big_nohaplotig	CDS	111361601	111362945	.	-	0	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 3958 5302 +
Chr2	stalkie_big_nohaplotig	CDS	111363965	111364197	.	-	2	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 3725 3957 +
Chr2	stalkie_big_nohaplotig	CDS	111364257	111364385	.	-	2	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 3596 3724 +
Chr2	stalkie_big_nohaplotig	CDS	111364438	111364573	.	-	0	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 3460 3595 +
Chr2	stalkie_big_nohaplotig	CDS	111364923	111365473	.	-	2	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 2909 3459 +
Chr2	stalkie_big_nohaplotig	CDS	111366309	111366465	.	-	0	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 2752 2908 +
Chr2	stalkie_big_nohaplotig	CDS	111366527	111366680	.	-	1	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 2598 2751 +
Chr2	stalkie_big_nohaplotig	CDS	111366744	111366899	.	-	1	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 2442 2597 +
Chr2	stalkie_big_nohaplotig	CDS	111366957	111367132	.	-	0	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 2266 2441 +
Chr2	stalkie_big_nohaplotig	CDS	111367197	111367691	.	-	0	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 1771 2265 +
Chr2	stalkie_big_nohaplotig	CDS	111367759	111368232	.	-	0	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 1297 1770 +
Chr2	stalkie_big_nohaplotig	CDS	111369500	111369714	.	-	2	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 1082 1296 +
Chr2	stalkie_big_nohaplotig	CDS	111369775	111370537	.	-	0	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 319 1081 +
Chr2	stalkie_big_nohaplotig	CDS	111370610	111370725	.	-	2	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 203 318 +
Chr2	stalkie_big_nohaplotig	CDS	111370804	111370874	.	-	1	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 132 202 +
Chr2	stalkie_big_nohaplotig	CDS	111371023	111371153	.	-	0	Parent=FBgn0010051.1.mrna1;Target=FBgn0010051.1 1 131 +
Chr2	gffcl	locus	111394335	111399347	.	+	.	ID=RLOC_00020575;geneIDs=FBgn0010399.1.path1;transcripts=FBgn0010399.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111394335	111399347	.	+	.	ID=FBgn0010399.1.mrna1;geneID=FBgn0010399.1.path1;Name=FBgn0010399.1;Dir=sensecoverage=100.0;identity=100.0;matches=1914;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020575
Chr2	stalkie_big_nohaplotig	exon	111394335	111394556	100	+	.	Parent=FBgn0010399.1.mrna1;Target=FBgn0010399.1 1 222 +
Chr2	stalkie_big_nohaplotig	exon	111395694	111395896	100	+	.	Parent=FBgn0010399.1.mrna1;Target=FBgn0010399.1 223 425 +
Chr2	stalkie_big_nohaplotig	exon	111396604	111396769	100	+	.	Parent=FBgn0010399.1.mrna1;Target=FBgn0010399.1 426 591 +
Chr2	stalkie_big_nohaplotig	exon	111396854	111396959	100	+	.	Parent=FBgn0010399.1.mrna1;Target=FBgn0010399.1 592 697 +
Chr2	stalkie_big_nohaplotig	exon	111397022	111397182	100	+	.	Parent=FBgn0010399.1.mrna1;Target=FBgn0010399.1 698 858 +
Chr2	stalkie_big_nohaplotig	exon	111397234	111397450	100	+	.	Parent=FBgn0010399.1.mrna1;Target=FBgn0010399.1 859 1075 +
Chr2	stalkie_big_nohaplotig	exon	111398328	111398739	100	+	.	Parent=FBgn0010399.1.mrna1;Target=FBgn0010399.1 1076 1487 +
Chr2	stalkie_big_nohaplotig	exon	111398921	111399347	100	+	.	Parent=FBgn0010399.1.mrna1;Target=FBgn0010399.1 1488 1914 +
Chr2	stalkie_big_nohaplotig	CDS	111394335	111394556	.	+	0	Parent=FBgn0010399.1.mrna1;Target=FBgn0010399.1 1 222 +
Chr2	stalkie_big_nohaplotig	CDS	111395694	111395896	.	+	0	Parent=FBgn0010399.1.mrna1;Target=FBgn0010399.1 223 425 +
Chr2	stalkie_big_nohaplotig	CDS	111396604	111396769	.	+	1	Parent=FBgn0010399.1.mrna1;Target=FBgn0010399.1 426 591 +
Chr2	stalkie_big_nohaplotig	CDS	111396854	111396959	.	+	0	Parent=FBgn0010399.1.mrna1;Target=FBgn0010399.1 592 697 +
Chr2	stalkie_big_nohaplotig	CDS	111397022	111397182	.	+	2	Parent=FBgn0010399.1.mrna1;Target=FBgn0010399.1 698 858 +
Chr2	stalkie_big_nohaplotig	CDS	111397234	111397450	.	+	0	Parent=FBgn0010399.1.mrna1;Target=FBgn0010399.1 859 1075 +
Chr2	stalkie_big_nohaplotig	CDS	111398328	111398739	.	+	2	Parent=FBgn0010399.1.mrna1;Target=FBgn0010399.1 1076 1487 +
Chr2	stalkie_big_nohaplotig	CDS	111398921	111399347	.	+	1	Parent=FBgn0010399.1.mrna1;Target=FBgn0010399.1 1488 1914 +
Chr2	gffcl	locus	111401433	111401717	.	+	.	ID=RLOC_00020576;geneIDs=comp143994_c1_seq1.path1;transcripts=comp143994_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111401433	111401717	.	+	.	ID=comp143994_c1_seq1.mrna1;geneID=comp143994_c1_seq1.path1;Name=comp143994_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=285;mismatches=0;indels=0;unknowns=0;Target=comp143994_c1_seq1 285 1 .;CDS_Target=comp143994_c1_seq1 107 3 .;locus=RLOC_00020576
Chr2	stalkie_big_nohaplotig	exon	111401433	111401717	100	+	.	Parent=comp143994_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111401435	111401539	.	+	0	Parent=comp143994_c1_seq1.mrna1
Chr2	gffcl	locus	111424769	111424965	.	-	.	ID=RLOC_00020577;geneIDs=comp115520_c0_seq1.path1;transcripts=comp115520_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111424769	111424965	.	-	.	ID=comp115520_c0_seq1.mrna1;geneID=comp115520_c0_seq1.path1;Name=comp115520_c0_seq1;Dir=indeterminatecoverage=96.1;identity=99.5;matches=196;mismatches=1;indels=0;unknowns=0;Target=comp115520_c0_seq1 197 1 .;CDS_Target=comp115520_c0_seq1 86 3 .;locus=RLOC_00020577
Chr2	stalkie_big_nohaplotig	exon	111424769	111424965	99	-	.	Parent=comp115520_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111424880	111424963	.	-	0	Parent=comp115520_c0_seq1.mrna1
Chr2	gffcl	locus	111425091	111426555	.	+	.	ID=RLOC_00020578;geneIDs=comp161634_c1_seq1.path1;transcripts=comp161634_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111425091	111426555	.	+	.	ID=comp161634_c1_seq1.mrna1;geneID=comp161634_c1_seq1.path1;Name=comp161634_c1_seq1;Dir=sensecoverage=72.3;identity=100.0;matches=1200;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020578
Chr2	stalkie_big_nohaplotig	exon	111425091	111425157	100	+	.	Parent=comp161634_c1_seq1.mrna1;Target=comp161634_c1_seq1 1 67 +
Chr2	stalkie_big_nohaplotig	exon	111425225	111425572	100	+	.	Parent=comp161634_c1_seq1.mrna1;Target=comp161634_c1_seq1 68 415 +
Chr2	stalkie_big_nohaplotig	exon	111425638	111425879	100	+	.	Parent=comp161634_c1_seq1.mrna1;Target=comp161634_c1_seq1 416 657 +
Chr2	stalkie_big_nohaplotig	exon	111425951	111426381	100	+	.	Parent=comp161634_c1_seq1.mrna1;Target=comp161634_c1_seq1 658 1088 +
Chr2	stalkie_big_nohaplotig	exon	111426444	111426555	100	+	.	Parent=comp161634_c1_seq1.mrna1;Target=comp161634_c1_seq1 1089 1200 +
Chr2	stalkie_big_nohaplotig	CDS	111425092	111425157	.	+	0	Parent=comp161634_c1_seq1.mrna1;Target=comp161634_c1_seq1 2 67 +
Chr2	stalkie_big_nohaplotig	CDS	111425225	111425572	.	+	0	Parent=comp161634_c1_seq1.mrna1;Target=comp161634_c1_seq1 68 415 +
Chr2	stalkie_big_nohaplotig	CDS	111425638	111425879	.	+	0	Parent=comp161634_c1_seq1.mrna1;Target=comp161634_c1_seq1 416 657 +
Chr2	stalkie_big_nohaplotig	CDS	111425951	111426381	.	+	1	Parent=comp161634_c1_seq1.mrna1;Target=comp161634_c1_seq1 658 1088 +
Chr2	stalkie_big_nohaplotig	CDS	111426444	111426553	.	+	2	Parent=comp161634_c1_seq1.mrna1;Target=comp161634_c1_seq1 1089 1198 +
Chr2	gffcl	locus	111429573	111443963	.	+	.	ID=RLOC_00020579;geneIDs=FBgn0051547.1.path1,comp159325_c1_seq1.path1;transcripts=comp159325_c1_seq1.mrna1,FBgn0051547.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111429573	111443963	.	+	.	ID=comp159325_c1_seq1.mrna1;geneID=comp159325_c1_seq1.path1;Name=comp159325_c1_seq1;Dir=sensecoverage=99.1;identity=100.0;matches=4704;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020579
Chr2	stalkie_big_nohaplotig	exon	111429573	111429955	100	+	.	Parent=comp159325_c1_seq1.mrna1;Target=comp159325_c1_seq1 1 383 +
Chr2	stalkie_big_nohaplotig	exon	111433106	111433202	100	+	.	Parent=comp159325_c1_seq1.mrna1;Target=comp159325_c1_seq1 384 480 +
Chr2	stalkie_big_nohaplotig	exon	111438809	111439202	100	+	.	Parent=comp159325_c1_seq1.mrna1;Target=comp159325_c1_seq1 481 874 +
Chr2	stalkie_big_nohaplotig	exon	111439261	111439494	100	+	.	Parent=comp159325_c1_seq1.mrna1;Target=comp159325_c1_seq1 875 1108 +
Chr2	stalkie_big_nohaplotig	exon	111439560	111439876	99	+	.	Parent=comp159325_c1_seq1.mrna1;Target=comp159325_c1_seq1 1109 1425 +
Chr2	stalkie_big_nohaplotig	exon	111439946	111440745	100	+	.	Parent=comp159325_c1_seq1.mrna1;Target=comp159325_c1_seq1 1426 2225 +
Chr2	stalkie_big_nohaplotig	exon	111440804	111441045	100	+	.	Parent=comp159325_c1_seq1.mrna1;Target=comp159325_c1_seq1 2226 2467 +
Chr2	stalkie_big_nohaplotig	exon	111441111	111441508	100	+	.	Parent=comp159325_c1_seq1.mrna1;Target=comp159325_c1_seq1 2468 2865 +
Chr2	stalkie_big_nohaplotig	exon	111441564	111441675	100	+	.	Parent=comp159325_c1_seq1.mrna1;Target=comp159325_c1_seq1 2866 2977 +
Chr2	stalkie_big_nohaplotig	exon	111441728	111442001	100	+	.	Parent=comp159325_c1_seq1.mrna1;Target=comp159325_c1_seq1 2978 3251 +
Chr2	stalkie_big_nohaplotig	exon	111442510	111443963	100	+	.	Parent=comp159325_c1_seq1.mrna1;Target=comp159325_c1_seq1 3252 4705 +
Chr2	stalkie_big_nohaplotig	CDS	111429702	111429955	.	+	0	Parent=comp159325_c1_seq1.mrna1;Target=comp159325_c1_seq1 130 383 +
Chr2	stalkie_big_nohaplotig	CDS	111433106	111433202	.	+	1	Parent=comp159325_c1_seq1.mrna1;Target=comp159325_c1_seq1 384 480 +
Chr2	stalkie_big_nohaplotig	CDS	111438809	111439202	.	+	0	Parent=comp159325_c1_seq1.mrna1;Target=comp159325_c1_seq1 481 874 +
Chr2	stalkie_big_nohaplotig	CDS	111439261	111439494	.	+	2	Parent=comp159325_c1_seq1.mrna1;Target=comp159325_c1_seq1 875 1108 +
Chr2	stalkie_big_nohaplotig	CDS	111439560	111439876	.	+	2	Parent=comp159325_c1_seq1.mrna1;Target=comp159325_c1_seq1 1109 1425 +
Chr2	stalkie_big_nohaplotig	CDS	111439946	111440362	.	+	0	Parent=comp159325_c1_seq1.mrna1;Target=comp159325_c1_seq1 1426 1842 +
Chr2	stalkie_big_nohaplotig	mRNA	111429672	111442623	.	+	.	ID=FBgn0051547.1.mrna1;geneID=FBgn0051547.1.path1;Name=FBgn0051547.1;Dir=sensecoverage=100.0;identity=100.0;matches=3200;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020579
Chr2	stalkie_big_nohaplotig	exon	111429672	111429955	100	+	.	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 1 284 +
Chr2	stalkie_big_nohaplotig	exon	111433106	111433202	100	+	.	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 285 381 +
Chr2	stalkie_big_nohaplotig	exon	111438809	111439202	100	+	.	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 382 775 +
Chr2	stalkie_big_nohaplotig	exon	111439261	111439494	100	+	.	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 776 1009 +
Chr2	stalkie_big_nohaplotig	exon	111439560	111439876	99	+	.	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 1010 1326 +
Chr2	stalkie_big_nohaplotig	exon	111439946	111440332	100	+	.	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 1327 1713 +
Chr2	stalkie_big_nohaplotig	exon	111440398	111440745	100	+	.	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 1714 2061 +
Chr2	stalkie_big_nohaplotig	exon	111440804	111441045	100	+	.	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 2062 2303 +
Chr2	stalkie_big_nohaplotig	exon	111441111	111441508	100	+	.	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 2304 2701 +
Chr2	stalkie_big_nohaplotig	exon	111441564	111441675	100	+	.	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 2702 2813 +
Chr2	stalkie_big_nohaplotig	exon	111441728	111442001	100	+	.	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 2814 3087 +
Chr2	stalkie_big_nohaplotig	exon	111442510	111442623	100	+	.	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 3088 3201 +
Chr2	stalkie_big_nohaplotig	CDS	111429672	111429955	.	+	0	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 1 284 +
Chr2	stalkie_big_nohaplotig	CDS	111433106	111433202	.	+	1	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 285 381 +
Chr2	stalkie_big_nohaplotig	CDS	111438809	111439202	.	+	0	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 382 775 +
Chr2	stalkie_big_nohaplotig	CDS	111439261	111439494	.	+	2	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 776 1009 +
Chr2	stalkie_big_nohaplotig	CDS	111439560	111439876	.	+	2	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 1010 1326 +
Chr2	stalkie_big_nohaplotig	CDS	111439946	111440332	.	+	0	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 1327 1713 +
Chr2	stalkie_big_nohaplotig	CDS	111440398	111440745	.	+	0	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 1714 2061 +
Chr2	stalkie_big_nohaplotig	CDS	111440804	111441045	.	+	0	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 2062 2303 +
Chr2	stalkie_big_nohaplotig	CDS	111441111	111441508	.	+	1	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 2304 2701 +
Chr2	stalkie_big_nohaplotig	CDS	111441564	111441675	.	+	2	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 2702 2813 +
Chr2	stalkie_big_nohaplotig	CDS	111441728	111442001	.	+	1	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 2814 3087 +
Chr2	stalkie_big_nohaplotig	CDS	111442510	111442623	.	+	0	Parent=FBgn0051547.1.mrna1;Target=FBgn0051547.1 3088 3201 +
Chr2	gffcl	locus	111434914	111436129	.	-	.	ID=RLOC_00020580;geneIDs=comp139101_c0_seq1.path1;transcripts=comp139101_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111434914	111436129	.	-	.	ID=comp139101_c0_seq1.mrna1;geneID=comp139101_c0_seq1.path1;Name=comp139101_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1216;mismatches=0;indels=2;unknowns=0;Target=comp139101_c0_seq1 1218 1 .;CDS_Target=comp139101_c0_seq1 464 351 .;locus=RLOC_00020580
Chr2	stalkie_big_nohaplotig	exon	111434914	111436129	99	-	.	Parent=comp139101_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111435666	111435779	.	-	0	Parent=comp139101_c0_seq1.mrna1
Chr2	gffcl	locus	111437004	111438089	.	+	.	ID=RLOC_00020581;geneIDs=comp139844_c0_seq1.path1;transcripts=comp139844_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111437004	111438089	.	+	.	ID=comp139844_c0_seq1.mrna1;geneID=comp139844_c0_seq1.path1;Name=comp139844_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1086;mismatches=0;indels=0;unknowns=0;Target=comp139844_c0_seq1 1086 1 .;CDS_Target=comp139844_c0_seq1 119 3 .;locus=RLOC_00020581
Chr2	stalkie_big_nohaplotig	exon	111437004	111438089	100	+	.	Parent=comp139844_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111437006	111437122	.	+	0	Parent=comp139844_c0_seq1.mrna1
Chr2	gffcl	locus	111445136	111449893	.	-	.	ID=RLOC_00020582;geneIDs=FBgn0033166.1.path2,FBgn0051550.1.path1,comp53795_c0_seq1.path1;transcripts=FBgn0051550.1.mrna1,comp53795_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111445136	111449893	.	-	.	ID=FBgn0051550.1.mrna1;geneID=FBgn0051550.1.path1;Name=FBgn0051550.1;Dir=sensecoverage=98.2;identity=99.9;matches=2053;mismatches=1;indels=1;unknowns=1;Target=FBgn0051550.1 39 467 +;locus=RLOC_00020582
Chr2	stalkie_big_nohaplotig	exon	111445136	111445159	100	-	.	Parent=FBgn0051550.1.mrna1;Target=FBgn0051550.1 2071 2094 +
Chr2	stalkie_big_nohaplotig	exon	111445221	111445350	100	-	.	Parent=FBgn0051550.1.mrna1;Target=FBgn0051550.1 1941 2070 +
Chr2	stalkie_big_nohaplotig	exon	111446630	111447188	100	-	.	Parent=FBgn0051550.1.mrna1;Target=FBgn0051550.1 1382 1940 +
Chr2	stalkie_big_nohaplotig	exon	111447243	111447757	100	-	.	Parent=FBgn0051550.1.mrna1;Target=FBgn0051550.1 867 1381 +
Chr2	stalkie_big_nohaplotig	exon	111448829	111448967	100	-	.	Parent=FBgn0051550.1.mrna1;Target=FBgn0051550.1 728 866 +
Chr2	stalkie_big_nohaplotig	exon	111449206	111449893	99	-	.	Parent=FBgn0051550.1.mrna1;Target=FBgn0051550.1 39 727 +
Chr2	stalkie_big_nohaplotig	CDS	111449466	111449893	.	-	0	Parent=FBgn0051550.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111448580	111448850	.	-	.	ID=comp53795_c0_seq1.mrna1;geneID=comp53795_c0_seq1.path1;Name=comp53795_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=271;mismatches=0;indels=0;unknowns=0;Target=comp53795_c0_seq1 271 1 .;CDS_Target=comp53795_c0_seq1 191 114 .;locus=RLOC_00020582
Chr2	stalkie_big_nohaplotig	exon	111448580	111448850	100	-	.	Parent=comp53795_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111448660	111448737	.	-	0	Parent=comp53795_c0_seq1.mrna1
Chr2	gffcl	locus	111451963	111465665	.	-	.	ID=RLOC_00020583;geneIDs=FBgn0037332.1.path1;transcripts=FBgn0037332.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111451963	111465665	.	-	.	ID=FBgn0037332.1.mrna1;geneID=FBgn0037332.1.path1;Name=FBgn0037332.1;Dir=sensecoverage=100.0;identity=100.0;matches=3144;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020583
Chr2	stalkie_big_nohaplotig	exon	111451963	111452137	100	-	.	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 2970 3144 +
Chr2	stalkie_big_nohaplotig	exon	111452198	111452526	100	-	.	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 2641 2969 +
Chr2	stalkie_big_nohaplotig	exon	111458770	111458913	100	-	.	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 2497 2640 +
Chr2	stalkie_big_nohaplotig	exon	111458972	111459121	100	-	.	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 2347 2496 +
Chr2	stalkie_big_nohaplotig	exon	111459183	111459365	100	-	.	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 2164 2346 +
Chr2	stalkie_big_nohaplotig	exon	111460475	111460681	100	-	.	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 1957 2163 +
Chr2	stalkie_big_nohaplotig	exon	111460750	111460888	100	-	.	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 1818 1956 +
Chr2	stalkie_big_nohaplotig	exon	111462205	111462353	100	-	.	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 1669 1817 +
Chr2	stalkie_big_nohaplotig	exon	111462421	111462619	100	-	.	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 1470 1668 +
Chr2	stalkie_big_nohaplotig	exon	111462682	111463088	100	-	.	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 1063 1469 +
Chr2	stalkie_big_nohaplotig	exon	111464278	111464744	100	-	.	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 596 1062 +
Chr2	stalkie_big_nohaplotig	exon	111464824	111464980	100	-	.	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 439 595 +
Chr2	stalkie_big_nohaplotig	exon	111465164	111465453	100	-	.	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 149 438 +
Chr2	stalkie_big_nohaplotig	exon	111465518	111465665	100	-	.	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 1 148 +
Chr2	stalkie_big_nohaplotig	CDS	111451963	111452137	.	-	1	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 2970 3144 +
Chr2	stalkie_big_nohaplotig	CDS	111452198	111452526	.	-	0	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 2641 2969 +
Chr2	stalkie_big_nohaplotig	CDS	111458770	111458913	.	-	0	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 2497 2640 +
Chr2	stalkie_big_nohaplotig	CDS	111458972	111459121	.	-	0	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 2347 2496 +
Chr2	stalkie_big_nohaplotig	CDS	111459183	111459365	.	-	0	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 2164 2346 +
Chr2	stalkie_big_nohaplotig	CDS	111460475	111460681	.	-	0	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 1957 2163 +
Chr2	stalkie_big_nohaplotig	CDS	111460750	111460888	.	-	1	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 1818 1956 +
Chr2	stalkie_big_nohaplotig	CDS	111462205	111462353	.	-	0	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 1669 1817 +
Chr2	stalkie_big_nohaplotig	CDS	111462421	111462619	.	-	1	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 1470 1668 +
Chr2	stalkie_big_nohaplotig	CDS	111462682	111463088	.	-	0	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 1063 1469 +
Chr2	stalkie_big_nohaplotig	CDS	111464278	111464744	.	-	2	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 596 1062 +
Chr2	stalkie_big_nohaplotig	CDS	111464824	111464980	.	-	0	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 439 595 +
Chr2	stalkie_big_nohaplotig	CDS	111465164	111465453	.	-	2	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 149 438 +
Chr2	stalkie_big_nohaplotig	CDS	111465518	111465665	.	-	0	Parent=FBgn0037332.1.mrna1;Target=FBgn0037332.1 1 148 +
Chr2	gffcl	locus	111453032	111456628	.	+	.	ID=RLOC_00020584;geneIDs=FBgn0015402.1.path1;transcripts=FBgn0015402.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111453032	111456628	.	+	.	ID=FBgn0015402.1.mrna1;geneID=FBgn0015402.1.path1;Name=FBgn0015402.1;Dir=sensecoverage=100.0;identity=100.0;matches=3261;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020584
Chr2	stalkie_big_nohaplotig	exon	111453032	111453068	100	+	.	Parent=FBgn0015402.1.mrna1;Target=FBgn0015402.1 1 37 +
Chr2	stalkie_big_nohaplotig	exon	111453405	111456628	100	+	.	Parent=FBgn0015402.1.mrna1;Target=FBgn0015402.1 38 3261 +
Chr2	stalkie_big_nohaplotig	CDS	111453032	111453068	.	+	0	Parent=FBgn0015402.1.mrna1;Target=FBgn0015402.1 1 37 +
Chr2	stalkie_big_nohaplotig	CDS	111453405	111456628	.	+	2	Parent=FBgn0015402.1.mrna1;Target=FBgn0015402.1 38 3261 +
Chr2	gffcl	locus	111466850	111469550	.	+	.	ID=RLOC_00020585;geneIDs=FBgn0025825.1.path1,comp130222_c0_seq1.path1;transcripts=comp130222_c0_seq1.mrna1,FBgn0025825.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111466850	111468299	.	+	.	ID=comp130222_c0_seq1.mrna1;geneID=comp130222_c0_seq1.path1;Name=comp130222_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=801;mismatches=0;indels=0;unknowns=0;Target=comp130222_c0_seq1 188 343 +;locus=RLOC_00020585
Chr2	stalkie_big_nohaplotig	exon	111466850	111467632	100	+	.	Parent=comp130222_c0_seq1.mrna1;Target=comp130222_c0_seq1 1 783 +
Chr2	stalkie_big_nohaplotig	exon	111468282	111468299	100	+	.	Parent=comp130222_c0_seq1.mrna1;Target=comp130222_c0_seq1 784 801 +
Chr2	stalkie_big_nohaplotig	CDS	111467037	111467192	.	+	0	Parent=comp130222_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111468042	111469550	.	+	.	ID=FBgn0025825.1.mrna1;geneID=FBgn0025825.1.path1;Name=FBgn0025825.1;Dir=sensecoverage=100.0;identity=100.0;matches=1341;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020585
Chr2	stalkie_big_nohaplotig	exon	111468042	111468229	100	+	.	Parent=FBgn0025825.1.mrna1;Target=FBgn0025825.1 1 188 +
Chr2	stalkie_big_nohaplotig	exon	111468282	111468370	100	+	.	Parent=FBgn0025825.1.mrna1;Target=FBgn0025825.1 189 277 +
Chr2	stalkie_big_nohaplotig	exon	111468430	111468624	100	+	.	Parent=FBgn0025825.1.mrna1;Target=FBgn0025825.1 278 472 +
Chr2	stalkie_big_nohaplotig	exon	111468682	111469550	100	+	.	Parent=FBgn0025825.1.mrna1;Target=FBgn0025825.1 473 1341 +
Chr2	stalkie_big_nohaplotig	CDS	111468042	111468229	.	+	0	Parent=FBgn0025825.1.mrna1;Target=FBgn0025825.1 1 188 +
Chr2	stalkie_big_nohaplotig	CDS	111468282	111468370	.	+	1	Parent=FBgn0025825.1.mrna1;Target=FBgn0025825.1 189 277 +
Chr2	stalkie_big_nohaplotig	CDS	111468430	111468624	.	+	2	Parent=FBgn0025825.1.mrna1;Target=FBgn0025825.1 278 472 +
Chr2	stalkie_big_nohaplotig	CDS	111468682	111469550	.	+	2	Parent=FBgn0025825.1.mrna1;Target=FBgn0025825.1 473 1341 +
Chr2	gffcl	locus	111470110	111471359	.	-	.	ID=RLOC_00020586;geneIDs=FBgn0011715.1.path1;transcripts=FBgn0011715.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111470110	111471359	.	-	.	ID=FBgn0011715.1.mrna1;geneID=FBgn0011715.1.path1;Name=FBgn0011715.1;Dir=sensecoverage=100.0;identity=100.0;matches=1146;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020586
Chr2	stalkie_big_nohaplotig	exon	111470110	111470639	100	-	.	Parent=FBgn0011715.1.mrna1;Target=FBgn0011715.1 617 1146 +
Chr2	stalkie_big_nohaplotig	exon	111470695	111471002	100	-	.	Parent=FBgn0011715.1.mrna1;Target=FBgn0011715.1 309 616 +
Chr2	stalkie_big_nohaplotig	exon	111471052	111471359	100	-	.	Parent=FBgn0011715.1.mrna1;Target=FBgn0011715.1 1 308 +
Chr2	stalkie_big_nohaplotig	CDS	111470110	111470639	.	-	2	Parent=FBgn0011715.1.mrna1;Target=FBgn0011715.1 617 1146 +
Chr2	stalkie_big_nohaplotig	CDS	111470695	111471002	.	-	1	Parent=FBgn0011715.1.mrna1;Target=FBgn0011715.1 309 616 +
Chr2	stalkie_big_nohaplotig	CDS	111471052	111471359	.	-	0	Parent=FBgn0011715.1.mrna1;Target=FBgn0011715.1 1 308 +
Chr2	gffcl	locus	111473465	111473719	.	+	.	ID=RLOC_00020587;geneIDs=comp72783_c0_seq1.path1;transcripts=comp72783_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111473465	111473719	.	+	.	ID=comp72783_c0_seq1.mrna1;geneID=comp72783_c0_seq1.path1;Name=comp72783_c0_seq1;Dir=indeterminatecoverage=53.7;identity=94.0;matches=251;mismatches=4;indels=12;unknowns=0;Target=comp72783_c0_seq1 477 211 .;CDS_Target=comp72783_c0_seq1 313 212 .;locus=RLOC_00020587
Chr2	stalkie_big_nohaplotig	exon	111473465	111473719	94	+	.	Parent=comp72783_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111473466	111473567	.	+	0	Parent=comp72783_c0_seq1.mrna1
Chr2	gffcl	locus	111474159	111475589	.	+	.	ID=RLOC_00020588;geneIDs=FBgn0025674.2.path1;transcripts=FBgn0025674.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111474159	111475589	.	+	.	ID=FBgn0025674.2.mrna1;geneID=FBgn0025674.2.path1;Name=FBgn0025674.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1431;mismatches=0;indels=0;unknowns=0;Target=FBgn0025674.2 1431 1 .;locus=RLOC_00020588
Chr2	stalkie_big_nohaplotig	exon	111474159	111475589	100	+	.	Parent=FBgn0025674.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111474159	111475589	.	+	0	Parent=FBgn0025674.2.mrna1
Chr2	gffcl	locus	111476552	111476792	.	-	.	ID=RLOC_00020589;geneIDs=comp162436_c11_seq1.path2;transcripts=comp162436_c11_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	111476552	111476792	.	-	.	ID=comp162436_c11_seq1.mrna2;geneID=comp162436_c11_seq1.path2;Name=comp162436_c11_seq1;Dir=indeterminatecoverage=40.1;identity=100.0;matches=241;mismatches=0;indels=0;unknowns=0;Target=comp162436_c11_seq1 601 361 .;locus=RLOC_00020589
Chr2	stalkie_big_nohaplotig	exon	111476552	111476792	100	-	.	Parent=comp162436_c11_seq1.mrna2
Chr2	gffcl	locus	111478671	111479796	.	+	.	ID=RLOC_00020590;geneIDs=FBgn0037330.1.path1;transcripts=FBgn0037330.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111478671	111479796	.	+	.	ID=FBgn0037330.1.mrna1;geneID=FBgn0037330.1.path1;Name=FBgn0037330.1;Dir=sensecoverage=100.0;identity=100.0;matches=1020;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020590
Chr2	stalkie_big_nohaplotig	exon	111478671	111478800	100	+	.	Parent=FBgn0037330.1.mrna1;Target=FBgn0037330.1 1 130 +
Chr2	stalkie_big_nohaplotig	exon	111478853	111479611	100	+	.	Parent=FBgn0037330.1.mrna1;Target=FBgn0037330.1 131 889 +
Chr2	stalkie_big_nohaplotig	exon	111479666	111479796	100	+	.	Parent=FBgn0037330.1.mrna1;Target=FBgn0037330.1 890 1020 +
Chr2	stalkie_big_nohaplotig	CDS	111478671	111478800	.	+	0	Parent=FBgn0037330.1.mrna1;Target=FBgn0037330.1 1 130 +
Chr2	stalkie_big_nohaplotig	CDS	111478853	111479611	.	+	2	Parent=FBgn0037330.1.mrna1;Target=FBgn0037330.1 131 889 +
Chr2	stalkie_big_nohaplotig	CDS	111479666	111479796	.	+	2	Parent=FBgn0037330.1.mrna1;Target=FBgn0037330.1 890 1020 +
Chr2	gffcl	locus	111479988	111481464	.	-	.	ID=RLOC_00020591;geneIDs=FBgn0037329.1.path1;transcripts=FBgn0037329.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111479988	111481464	.	-	.	ID=FBgn0037329.1.mrna1;geneID=FBgn0037329.1.path1;Name=FBgn0037329.1;Dir=sensecoverage=100.0;identity=100.0;matches=1209;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020591
Chr2	stalkie_big_nohaplotig	exon	111479988	111480326	100	-	.	Parent=FBgn0037329.1.mrna1;Target=FBgn0037329.1 871 1209 +
Chr2	stalkie_big_nohaplotig	exon	111480382	111480723	100	-	.	Parent=FBgn0037329.1.mrna1;Target=FBgn0037329.1 529 870 +
Chr2	stalkie_big_nohaplotig	exon	111480785	111481184	100	-	.	Parent=FBgn0037329.1.mrna1;Target=FBgn0037329.1 129 528 +
Chr2	stalkie_big_nohaplotig	exon	111481337	111481464	100	-	.	Parent=FBgn0037329.1.mrna1;Target=FBgn0037329.1 1 128 +
Chr2	stalkie_big_nohaplotig	CDS	111479988	111480326	.	-	0	Parent=FBgn0037329.1.mrna1;Target=FBgn0037329.1 871 1209 +
Chr2	stalkie_big_nohaplotig	CDS	111480382	111480723	.	-	0	Parent=FBgn0037329.1.mrna1;Target=FBgn0037329.1 529 870 +
Chr2	stalkie_big_nohaplotig	CDS	111480785	111481184	.	-	1	Parent=FBgn0037329.1.mrna1;Target=FBgn0037329.1 129 528 +
Chr2	stalkie_big_nohaplotig	CDS	111481337	111481464	.	-	0	Parent=FBgn0037329.1.mrna1;Target=FBgn0037329.1 1 128 +
Chr2	gffcl	locus	111493091	111494327	.	-	.	ID=RLOC_00020593;geneIDs=FBgn0032453.1.path1;transcripts=FBgn0032453.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111493091	111494327	.	-	.	ID=FBgn0032453.1.mrna1;geneID=FBgn0032453.1.path1;Name=FBgn0032453.1;Dir=sensecoverage=58.8;identity=100.0;matches=954;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020593
Chr2	stalkie_big_nohaplotig	exon	111493091	111493945	100	-	.	Parent=FBgn0032453.1.mrna1;Target=FBgn0032453.1 100 954 +
Chr2	stalkie_big_nohaplotig	exon	111494229	111494327	100	-	.	Parent=FBgn0032453.1.mrna1;Target=FBgn0032453.1 1 99 +
Chr2	stalkie_big_nohaplotig	CDS	111493091	111493945	.	-	0	Parent=FBgn0032453.1.mrna1;Target=FBgn0032453.1 100 954 +
Chr2	stalkie_big_nohaplotig	CDS	111494229	111494327	.	-	0	Parent=FBgn0032453.1.mrna1;Target=FBgn0032453.1 1 99 +
Chr2	gffcl	locus	111494874	111495745	.	+	.	ID=RLOC_00020594;geneIDs=FBgn0017567.1.path1;transcripts=FBgn0017567.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111494874	111495745	.	+	.	ID=FBgn0017567.1.mrna1;geneID=FBgn0017567.1.path1;Name=FBgn0017567.1;Dir=sensecoverage=100.0;identity=100.0;matches=657;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020594
Chr2	stalkie_big_nohaplotig	exon	111494874	111494925	100	+	.	Parent=FBgn0017567.1.mrna1;Target=FBgn0017567.1 1 52 +
Chr2	stalkie_big_nohaplotig	exon	111495083	111495528	100	+	.	Parent=FBgn0017567.1.mrna1;Target=FBgn0017567.1 53 498 +
Chr2	stalkie_big_nohaplotig	exon	111495587	111495745	100	+	.	Parent=FBgn0017567.1.mrna1;Target=FBgn0017567.1 499 657 +
Chr2	stalkie_big_nohaplotig	CDS	111494874	111494925	.	+	0	Parent=FBgn0017567.1.mrna1;Target=FBgn0017567.1 1 52 +
Chr2	stalkie_big_nohaplotig	CDS	111495083	111495528	.	+	2	Parent=FBgn0017567.1.mrna1;Target=FBgn0017567.1 53 498 +
Chr2	stalkie_big_nohaplotig	CDS	111495587	111495745	.	+	0	Parent=FBgn0017567.1.mrna1;Target=FBgn0017567.1 499 657 +
Chr2	gffcl	locus	111495917	111496729	.	-	.	ID=RLOC_00020595;geneIDs=FBgn0038369.1.path1;transcripts=FBgn0038369.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111495917	111496729	.	-	.	ID=FBgn0038369.1.mrna1;geneID=FBgn0038369.1.path1;Name=FBgn0038369.1;Dir=sensecoverage=100.0;identity=100.0;matches=597;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020595
Chr2	stalkie_big_nohaplotig	exon	111495917	111496071	100	-	.	Parent=FBgn0038369.1.mrna1;Target=FBgn0038369.1 443 597 +
Chr2	stalkie_big_nohaplotig	exon	111496125	111496320	100	-	.	Parent=FBgn0038369.1.mrna1;Target=FBgn0038369.1 247 442 +
Chr2	stalkie_big_nohaplotig	exon	111496370	111496543	100	-	.	Parent=FBgn0038369.1.mrna1;Target=FBgn0038369.1 73 246 +
Chr2	stalkie_big_nohaplotig	exon	111496658	111496729	100	-	.	Parent=FBgn0038369.1.mrna1;Target=FBgn0038369.1 1 72 +
Chr2	stalkie_big_nohaplotig	CDS	111495917	111496071	.	-	2	Parent=FBgn0038369.1.mrna1;Target=FBgn0038369.1 443 597 +
Chr2	stalkie_big_nohaplotig	CDS	111496125	111496320	.	-	0	Parent=FBgn0038369.1.mrna1;Target=FBgn0038369.1 247 442 +
Chr2	stalkie_big_nohaplotig	CDS	111496370	111496543	.	-	0	Parent=FBgn0038369.1.mrna1;Target=FBgn0038369.1 73 246 +
Chr2	stalkie_big_nohaplotig	CDS	111496658	111496729	.	-	0	Parent=FBgn0038369.1.mrna1;Target=FBgn0038369.1 1 72 +
Chr2	gffcl	locus	111497567	111500676	.	+	.	ID=RLOC_00020596;geneIDs=FBgn0011020.1.path1;transcripts=FBgn0011020.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111497567	111500676	.	+	.	ID=FBgn0011020.1.mrna1;geneID=FBgn0011020.1.path1;Name=FBgn0011020.1;Dir=sensecoverage=100.0;identity=100.0;matches=2748;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020596
Chr2	stalkie_big_nohaplotig	exon	111497567	111497792	100	+	.	Parent=FBgn0011020.1.mrna1;Target=FBgn0011020.1 1 226 +
Chr2	stalkie_big_nohaplotig	exon	111497852	111498916	100	+	.	Parent=FBgn0011020.1.mrna1;Target=FBgn0011020.1 227 1291 +
Chr2	stalkie_big_nohaplotig	exon	111498974	111499587	100	+	.	Parent=FBgn0011020.1.mrna1;Target=FBgn0011020.1 1292 1905 +
Chr2	stalkie_big_nohaplotig	exon	111499834	111500676	100	+	.	Parent=FBgn0011020.1.mrna1;Target=FBgn0011020.1 1906 2748 +
Chr2	stalkie_big_nohaplotig	CDS	111497567	111497792	.	+	0	Parent=FBgn0011020.1.mrna1;Target=FBgn0011020.1 1 226 +
Chr2	stalkie_big_nohaplotig	CDS	111497852	111498916	.	+	2	Parent=FBgn0011020.1.mrna1;Target=FBgn0011020.1 227 1291 +
Chr2	stalkie_big_nohaplotig	CDS	111498974	111499587	.	+	2	Parent=FBgn0011020.1.mrna1;Target=FBgn0011020.1 1292 1905 +
Chr2	stalkie_big_nohaplotig	CDS	111499834	111500676	.	+	0	Parent=FBgn0011020.1.mrna1;Target=FBgn0011020.1 1906 2748 +
Chr2	gffcl	locus	111500941	111510689	.	-	.	ID=RLOC_00020597;geneIDs=FBgn0037478.1.path1;transcripts=FBgn0037478.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111500941	111510689	.	-	.	ID=FBgn0037478.1.mrna1;geneID=FBgn0037478.1.path1;Name=FBgn0037478.1;Dir=sensecoverage=100.0;identity=100.0;matches=837;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020597
Chr2	stalkie_big_nohaplotig	exon	111500941	111501082	100	-	.	Parent=FBgn0037478.1.mrna1;Target=FBgn0037478.1 696 837 +
Chr2	stalkie_big_nohaplotig	exon	111509939	111510585	100	-	.	Parent=FBgn0037478.1.mrna1;Target=FBgn0037478.1 49 695 +
Chr2	stalkie_big_nohaplotig	exon	111510642	111510689	100	-	.	Parent=FBgn0037478.1.mrna1;Target=FBgn0037478.1 1 48 +
Chr2	stalkie_big_nohaplotig	CDS	111500941	111501082	.	-	1	Parent=FBgn0037478.1.mrna1;Target=FBgn0037478.1 696 837 +
Chr2	stalkie_big_nohaplotig	CDS	111509939	111510585	.	-	0	Parent=FBgn0037478.1.mrna1;Target=FBgn0037478.1 49 695 +
Chr2	stalkie_big_nohaplotig	CDS	111510642	111510689	.	-	0	Parent=FBgn0037478.1.mrna1;Target=FBgn0037478.1 1 48 +
Chr2	gffcl	locus	111504196	111509132	.	.	.	ID=RLOC_00020598;geneIDs=FBgn0250732.1.path1,comp146812_c0_seq1.path1;transcripts=FBgn0250732.1.mrna1,comp146812_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111504196	111509132	.	+	.	ID=FBgn0250732.1.mrna1;geneID=FBgn0250732.1.path1;Name=FBgn0250732.1;Dir=sensecoverage=100.0;identity=100.0;matches=2658;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020598
Chr2	stalkie_big_nohaplotig	exon	111504196	111504702	100	+	.	Parent=FBgn0250732.1.mrna1;Target=FBgn0250732.1 1 507 +
Chr2	stalkie_big_nohaplotig	exon	111504767	111505611	100	+	.	Parent=FBgn0250732.1.mrna1;Target=FBgn0250732.1 508 1352 +
Chr2	stalkie_big_nohaplotig	exon	111505683	111506288	100	+	.	Parent=FBgn0250732.1.mrna1;Target=FBgn0250732.1 1353 1958 +
Chr2	stalkie_big_nohaplotig	exon	111507823	111507964	100	+	.	Parent=FBgn0250732.1.mrna1;Target=FBgn0250732.1 1959 2100 +
Chr2	stalkie_big_nohaplotig	exon	111508575	111509132	100	+	.	Parent=FBgn0250732.1.mrna1;Target=FBgn0250732.1 2101 2658 +
Chr2	stalkie_big_nohaplotig	CDS	111504196	111504702	.	+	0	Parent=FBgn0250732.1.mrna1;Target=FBgn0250732.1 1 507 +
Chr2	stalkie_big_nohaplotig	CDS	111504767	111505611	.	+	0	Parent=FBgn0250732.1.mrna1;Target=FBgn0250732.1 508 1352 +
Chr2	stalkie_big_nohaplotig	CDS	111505683	111506288	.	+	1	Parent=FBgn0250732.1.mrna1;Target=FBgn0250732.1 1353 1958 +
Chr2	stalkie_big_nohaplotig	CDS	111507823	111507964	.	+	1	Parent=FBgn0250732.1.mrna1;Target=FBgn0250732.1 1959 2100 +
Chr2	stalkie_big_nohaplotig	CDS	111508575	111509132	.	+	0	Parent=FBgn0250732.1.mrna1;Target=FBgn0250732.1 2101 2658 +
Chr2	stalkie_big_nohaplotig	mRNA	111507401	111507844	.	-	.	ID=comp146812_c0_seq1.mrna1;geneID=comp146812_c0_seq1.path1;Name=comp146812_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=444;mismatches=0;indels=0;unknowns=0;Target=comp146812_c0_seq1 444 1 .;CDS_Target=comp146812_c0_seq1 140 3 .;locus=RLOC_00020598
Chr2	stalkie_big_nohaplotig	exon	111507401	111507844	100	-	.	Parent=comp146812_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111507705	111507842	.	-	0	Parent=comp146812_c0_seq1.mrna1
Chr2	gffcl	locus	111511061	111511994	.	+	.	ID=RLOC_00020599;geneIDs=Dv_FBgn0210841.1.path1;transcripts=Dv_FBgn0210841.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111511061	111511994	.	+	.	ID=Dv_FBgn0210841.1.mrna1;geneID=Dv_FBgn0210841.1.path1;Name=Dv_FBgn0210841.1;Dir=sensecoverage=100.0;identity=99.9;matches=800;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020599
Chr2	stalkie_big_nohaplotig	exon	111511061	111511104	100	+	.	Parent=Dv_FBgn0210841.1.mrna1;Target=Dv_FBgn0210841.1 1 44 +
Chr2	stalkie_big_nohaplotig	exon	111511188	111511415	100	+	.	Parent=Dv_FBgn0210841.1.mrna1;Target=Dv_FBgn0210841.1 45 272 +
Chr2	stalkie_big_nohaplotig	exon	111511466	111511994	99	+	.	Parent=Dv_FBgn0210841.1.mrna1;Target=Dv_FBgn0210841.1 273 801 +
Chr2	stalkie_big_nohaplotig	CDS	111511061	111511104	.	+	0	Parent=Dv_FBgn0210841.1.mrna1;Target=Dv_FBgn0210841.1 1 44 +
Chr2	stalkie_big_nohaplotig	CDS	111511188	111511415	.	+	1	Parent=Dv_FBgn0210841.1.mrna1;Target=Dv_FBgn0210841.1 45 272 +
Chr2	stalkie_big_nohaplotig	CDS	111511466	111511994	.	+	1	Parent=Dv_FBgn0210841.1.mrna1;Target=Dv_FBgn0210841.1 273 801 +
Chr2	gffcl	locus	111526549	111528311	.	+	.	ID=RLOC_00020601;geneIDs=comp160446_c0_seq1.path1;transcripts=comp160446_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111526549	111528311	.	+	.	ID=comp160446_c0_seq1.mrna1;geneID=comp160446_c0_seq1.path1;Name=comp160446_c0_seq1;Dir=indeterminatecoverage=75.3;identity=99.7;matches=1759;mismatches=4;indels=1;unknowns=0;Target=comp160446_c0_seq1 1764 1 .;CDS_Target=comp160446_c0_seq1 909 766 .;locus=RLOC_00020601
Chr2	stalkie_big_nohaplotig	exon	111526549	111528311	99	+	.	Parent=comp160446_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111527313	111527456	.	+	0	Parent=comp160446_c0_seq1.mrna1
Chr2	gffcl	locus	111532085	111533428	.	+	.	ID=RLOC_00020602;geneIDs=comp159861_c4_seq1.path1;transcripts=comp159861_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111532085	111533428	.	+	.	ID=comp159861_c4_seq1.mrna1;geneID=comp159861_c4_seq1.path1;Name=comp159861_c4_seq1;Dir=indeterminatecoverage=99.5;identity=99.9;matches=1342;mismatches=1;indels=1;unknowns=0;Target=comp159861_c4_seq1 1350 8 .;CDS_Target=comp159861_c4_seq1 678 577 .;locus=RLOC_00020602
Chr2	stalkie_big_nohaplotig	exon	111532085	111533428	99	+	.	Parent=comp159861_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111532655	111532756	.	+	0	Parent=comp159861_c4_seq1.mrna1
Chr2	gffcl	locus	111533509	111534046	.	+	.	ID=RLOC_00020603;geneIDs=comp105321_c0_seq1.path1;transcripts=comp105321_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111533509	111534046	.	+	.	ID=comp105321_c0_seq1.mrna1;geneID=comp105321_c0_seq1.path1;Name=comp105321_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=538;mismatches=0;indels=0;unknowns=0;Target=comp105321_c0_seq1 538 1 .;CDS_Target=comp105321_c0_seq1 36 1 .;locus=RLOC_00020603
Chr2	stalkie_big_nohaplotig	exon	111533509	111534046	100	+	.	Parent=comp105321_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111533509	111533544	.	+	0	Parent=comp105321_c0_seq1.mrna1
Chr2	gffcl	locus	111534824	111536493	.	-	.	ID=RLOC_00020604;geneIDs=FBgn0037660.1.path1;transcripts=FBgn0037660.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111534824	111536493	.	-	.	ID=FBgn0037660.1.mrna1;geneID=FBgn0037660.1.path1;Name=FBgn0037660.1;Dir=sensecoverage=100.0;identity=99.6;matches=1608;mismatches=6;indels=0;unknowns=0;locus=RLOC_00020604
Chr2	stalkie_big_nohaplotig	exon	111534824	111534892	100	-	.	Parent=FBgn0037660.1.mrna1;Target=FBgn0037660.1 1546 1614 +
Chr2	stalkie_big_nohaplotig	exon	111534949	111536493	99	-	.	Parent=FBgn0037660.1.mrna1;Target=FBgn0037660.1 1 1545 +
Chr2	stalkie_big_nohaplotig	CDS	111534824	111534892	.	-	0	Parent=FBgn0037660.1.mrna1;Target=FBgn0037660.1 1546 1614 +
Chr2	stalkie_big_nohaplotig	CDS	111534949	111536493	.	-	0	Parent=FBgn0037660.1.mrna1;Target=FBgn0037660.1 1 1545 +
Chr2	gffcl	locus	111538046	111538422	.	+	.	ID=RLOC_00020605;geneIDs=FBgn0259991.1.path1;transcripts=FBgn0259991.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111538046	111538422	.	+	.	ID=FBgn0259991.1.mrna1;geneID=FBgn0259991.1.path1;Name=FBgn0259991.1;Dir=sensecoverage=100.0;identity=100.0;matches=312;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020605
Chr2	stalkie_big_nohaplotig	exon	111538046	111538169	100	+	.	Parent=FBgn0259991.1.mrna1;Target=FBgn0259991.1 1 124 +
Chr2	stalkie_big_nohaplotig	exon	111538235	111538422	100	+	.	Parent=FBgn0259991.1.mrna1;Target=FBgn0259991.1 125 312 +
Chr2	stalkie_big_nohaplotig	CDS	111538046	111538169	.	+	0	Parent=FBgn0259991.1.mrna1;Target=FBgn0259991.1 1 124 +
Chr2	stalkie_big_nohaplotig	CDS	111538235	111538422	.	+	2	Parent=FBgn0259991.1.mrna1;Target=FBgn0259991.1 125 312 +
Chr2	gffcl	locus	111538441	111540251	.	+	.	ID=RLOC_00020606;geneIDs=FBgn0039339.1.path1;transcripts=FBgn0039339.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111538441	111540251	.	+	.	ID=FBgn0039339.1.mrna1;geneID=FBgn0039339.1.path1;Name=FBgn0039339.1;Dir=sensecoverage=100.0;identity=99.9;matches=1592;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020606
Chr2	stalkie_big_nohaplotig	exon	111538441	111538694	100	+	.	Parent=FBgn0039339.1.mrna1;Target=FBgn0039339.1 1 254 +
Chr2	stalkie_big_nohaplotig	exon	111538766	111539377	99	+	.	Parent=FBgn0039339.1.mrna1;Target=FBgn0039339.1 255 866 +
Chr2	stalkie_big_nohaplotig	exon	111539436	111539715	100	+	.	Parent=FBgn0039339.1.mrna1;Target=FBgn0039339.1 867 1146 +
Chr2	stalkie_big_nohaplotig	exon	111539805	111540251	100	+	.	Parent=FBgn0039339.1.mrna1;Target=FBgn0039339.1 1147 1593 +
Chr2	stalkie_big_nohaplotig	CDS	111538441	111538694	.	+	0	Parent=FBgn0039339.1.mrna1;Target=FBgn0039339.1 1 254 +
Chr2	stalkie_big_nohaplotig	CDS	111538766	111539377	.	+	1	Parent=FBgn0039339.1.mrna1;Target=FBgn0039339.1 255 866 +
Chr2	stalkie_big_nohaplotig	CDS	111539436	111539715	.	+	1	Parent=FBgn0039339.1.mrna1;Target=FBgn0039339.1 867 1146 +
Chr2	stalkie_big_nohaplotig	CDS	111539805	111540251	.	+	0	Parent=FBgn0039339.1.mrna1;Target=FBgn0039339.1 1147 1593 +
Chr2	gffcl	locus	111542331	111552729	.	-	.	ID=RLOC_00020607;geneIDs=FBgn0040212.1.path1;transcripts=FBgn0040212.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111542331	111552729	.	-	.	ID=FBgn0040212.1.mrna1;geneID=FBgn0040212.1.path1;Name=FBgn0040212.1;Dir=sensecoverage=100.0;identity=99.9;matches=2202;mismatches=3;indels=0;unknowns=0;locus=RLOC_00020607
Chr2	stalkie_big_nohaplotig	exon	111542331	111542651	100	-	.	Parent=FBgn0040212.1.mrna1;Target=FBgn0040212.1 1885 2205 +
Chr2	stalkie_big_nohaplotig	exon	111542717	111542881	100	-	.	Parent=FBgn0040212.1.mrna1;Target=FBgn0040212.1 1720 1884 +
Chr2	stalkie_big_nohaplotig	exon	111543970	111544539	100	-	.	Parent=FBgn0040212.1.mrna1;Target=FBgn0040212.1 1150 1719 +
Chr2	stalkie_big_nohaplotig	exon	111544595	111545142	99	-	.	Parent=FBgn0040212.1.mrna1;Target=FBgn0040212.1 602 1149 +
Chr2	stalkie_big_nohaplotig	exon	111552129	111552729	100	-	.	Parent=FBgn0040212.1.mrna1;Target=FBgn0040212.1 1 601 +
Chr2	stalkie_big_nohaplotig	CDS	111542331	111542651	.	-	0	Parent=FBgn0040212.1.mrna1;Target=FBgn0040212.1 1885 2205 +
Chr2	stalkie_big_nohaplotig	CDS	111542717	111542881	.	-	0	Parent=FBgn0040212.1.mrna1;Target=FBgn0040212.1 1720 1884 +
Chr2	stalkie_big_nohaplotig	CDS	111543970	111544539	.	-	0	Parent=FBgn0040212.1.mrna1;Target=FBgn0040212.1 1150 1719 +
Chr2	stalkie_big_nohaplotig	CDS	111544595	111545142	.	-	2	Parent=FBgn0040212.1.mrna1;Target=FBgn0040212.1 602 1149 +
Chr2	stalkie_big_nohaplotig	CDS	111552129	111552729	.	-	0	Parent=FBgn0040212.1.mrna1;Target=FBgn0040212.1 1 601 +
Chr2	gffcl	locus	111545644	111545929	.	-	.	ID=RLOC_00020608;geneIDs=comp146336_c2_seq1.path1;transcripts=comp146336_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111545644	111545929	.	-	.	ID=comp146336_c2_seq1.mrna1;geneID=comp146336_c2_seq1.path1;Name=comp146336_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=285;mismatches=1;indels=0;unknowns=0;Target=comp146336_c2_seq1 286 1 .;CDS_Target=comp146336_c2_seq1 189 127 .;locus=RLOC_00020608
Chr2	stalkie_big_nohaplotig	exon	111545644	111545929	99	-	.	Parent=comp146336_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111545741	111545803	.	-	0	Parent=comp146336_c2_seq1.mrna1
Chr2	gffcl	locus	111557099	111558688	.	+	.	ID=RLOC_00020609;geneIDs=FBgn0039341.1.path1;transcripts=FBgn0039341.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111557099	111558688	.	+	.	ID=FBgn0039341.1.mrna1;geneID=FBgn0039341.1.path1;Name=FBgn0039341.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1590;mismatches=0;indels=0;unknowns=0;Target=FBgn0039341.1 1590 1 .;locus=RLOC_00020609
Chr2	stalkie_big_nohaplotig	exon	111557099	111558688	100	+	.	Parent=FBgn0039341.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111557099	111558688	.	+	0	Parent=FBgn0039341.1.mrna1
Chr2	gffcl	locus	111559932	111561542	.	-	.	ID=RLOC_00020610;geneIDs=comp150674_c1_seq1.path1;transcripts=comp150674_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111559932	111561542	.	-	.	ID=comp150674_c1_seq1.mrna1;geneID=comp150674_c1_seq1.path1;Name=comp150674_c1_seq1;Dir=antisensecoverage=99.6;identity=100.0;matches=1338;mismatches=0;indels=0;unknowns=0;Target=comp150674_c1_seq1 779 979 .;locus=RLOC_00020610
Chr2	stalkie_big_nohaplotig	exon	111559932	111560280	100	-	.	Parent=comp150674_c1_seq1.mrna1;Target=comp150674_c1_seq1 6 354 -
Chr2	stalkie_big_nohaplotig	exon	111560421	111560565	100	-	.	Parent=comp150674_c1_seq1.mrna1;Target=comp150674_c1_seq1 355 499 -
Chr2	stalkie_big_nohaplotig	exon	111560699	111561542	100	-	.	Parent=comp150674_c1_seq1.mrna1;Target=comp150674_c1_seq1 500 1343 -
Chr2	stalkie_big_nohaplotig	CDS	111560978	111561178	.	-	0	Parent=comp150674_c1_seq1.mrna1
Chr2	gffcl	locus	111565521	111567327	.	+	.	ID=RLOC_00020611;geneIDs=FBgn0038584.1.path1;transcripts=FBgn0038584.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111565521	111567327	.	+	.	ID=FBgn0038584.1.mrna1;geneID=FBgn0038584.1.path1;Name=FBgn0038584.1;Dir=sensecoverage=100.0;identity=100.0;matches=1632;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020611
Chr2	stalkie_big_nohaplotig	exon	111565521	111565692	100	+	.	Parent=FBgn0038584.1.mrna1;Target=FBgn0038584.1 1 172 +
Chr2	stalkie_big_nohaplotig	exon	111565754	111566732	100	+	.	Parent=FBgn0038584.1.mrna1;Target=FBgn0038584.1 173 1151 +
Chr2	stalkie_big_nohaplotig	exon	111566795	111567019	100	+	.	Parent=FBgn0038584.1.mrna1;Target=FBgn0038584.1 1152 1376 +
Chr2	stalkie_big_nohaplotig	exon	111567072	111567327	100	+	.	Parent=FBgn0038584.1.mrna1;Target=FBgn0038584.1 1377 1632 +
Chr2	stalkie_big_nohaplotig	CDS	111565521	111565692	.	+	0	Parent=FBgn0038584.1.mrna1;Target=FBgn0038584.1 1 172 +
Chr2	stalkie_big_nohaplotig	CDS	111565754	111566732	.	+	2	Parent=FBgn0038584.1.mrna1;Target=FBgn0038584.1 173 1151 +
Chr2	stalkie_big_nohaplotig	CDS	111566795	111567019	.	+	1	Parent=FBgn0038584.1.mrna1;Target=FBgn0038584.1 1152 1376 +
Chr2	stalkie_big_nohaplotig	CDS	111567072	111567327	.	+	1	Parent=FBgn0038584.1.mrna1;Target=FBgn0038584.1 1377 1632 +
Chr2	gffcl	locus	111567428	111568510	.	-	.	ID=RLOC_00020612;geneIDs=FBgn0038471.1.path1;transcripts=FBgn0038471.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111567428	111568510	.	-	.	ID=FBgn0038471.1.mrna1;geneID=FBgn0038471.1.path1;Name=FBgn0038471.1;Dir=sensecoverage=100.0;identity=100.0;matches=945;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020612
Chr2	stalkie_big_nohaplotig	exon	111567428	111567571	100	-	.	Parent=FBgn0038471.1.mrna1;Target=FBgn0038471.1 802 945 +
Chr2	stalkie_big_nohaplotig	exon	111567627	111568282	100	-	.	Parent=FBgn0038471.1.mrna1;Target=FBgn0038471.1 146 801 +
Chr2	stalkie_big_nohaplotig	exon	111568366	111568510	100	-	.	Parent=FBgn0038471.1.mrna1;Target=FBgn0038471.1 1 145 +
Chr2	stalkie_big_nohaplotig	CDS	111567428	111567571	.	-	0	Parent=FBgn0038471.1.mrna1;Target=FBgn0038471.1 802 945 +
Chr2	stalkie_big_nohaplotig	CDS	111567627	111568282	.	-	2	Parent=FBgn0038471.1.mrna1;Target=FBgn0038471.1 146 801 +
Chr2	stalkie_big_nohaplotig	CDS	111568366	111568510	.	-	0	Parent=FBgn0038471.1.mrna1;Target=FBgn0038471.1 1 145 +
Chr2	gffcl	locus	111568776	111570400	.	+	.	ID=RLOC_00020613;geneIDs=FBgn0038454.1.path1;transcripts=FBgn0038454.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111568776	111570400	.	+	.	ID=FBgn0038454.1.mrna1;geneID=FBgn0038454.1.path1;Name=FBgn0038454.1;Dir=sensecoverage=100.0;identity=99.5;matches=1480;mismatches=8;indels=0;unknowns=0;locus=RLOC_00020613
Chr2	stalkie_big_nohaplotig	exon	111568776	111568927	98	+	.	Parent=FBgn0038454.1.mrna1;Target=FBgn0038454.1 1 152 +
Chr2	stalkie_big_nohaplotig	exon	111569007	111569722	99	+	.	Parent=FBgn0038454.1.mrna1;Target=FBgn0038454.1 153 868 +
Chr2	stalkie_big_nohaplotig	exon	111569781	111570400	100	+	.	Parent=FBgn0038454.1.mrna1;Target=FBgn0038454.1 869 1488 +
Chr2	stalkie_big_nohaplotig	CDS	111568776	111568927	.	+	0	Parent=FBgn0038454.1.mrna1;Target=FBgn0038454.1 1 152 +
Chr2	stalkie_big_nohaplotig	CDS	111569007	111569722	.	+	1	Parent=FBgn0038454.1.mrna1;Target=FBgn0038454.1 153 868 +
Chr2	stalkie_big_nohaplotig	CDS	111569781	111570400	.	+	2	Parent=FBgn0038454.1.mrna1;Target=FBgn0038454.1 869 1488 +
Chr2	gffcl	locus	111571387	111572192	.	-	.	ID=RLOC_00020614;geneIDs=FBgn0038453.1.path1;transcripts=FBgn0038453.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111571387	111572192	.	-	.	ID=FBgn0038453.1.mrna1;geneID=FBgn0038453.1.path1;Name=FBgn0038453.1;Dir=sensecoverage=100.0;identity=100.0;matches=624;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020614
Chr2	stalkie_big_nohaplotig	exon	111571387	111571596	100	-	.	Parent=FBgn0038453.1.mrna1;Target=FBgn0038453.1 415 624 +
Chr2	stalkie_big_nohaplotig	exon	111571658	111571845	100	-	.	Parent=FBgn0038453.1.mrna1;Target=FBgn0038453.1 227 414 +
Chr2	stalkie_big_nohaplotig	exon	111571900	111572083	100	-	.	Parent=FBgn0038453.1.mrna1;Target=FBgn0038453.1 43 226 +
Chr2	stalkie_big_nohaplotig	exon	111572151	111572192	100	-	.	Parent=FBgn0038453.1.mrna1;Target=FBgn0038453.1 1 42 +
Chr2	stalkie_big_nohaplotig	CDS	111571387	111571596	.	-	0	Parent=FBgn0038453.1.mrna1;Target=FBgn0038453.1 415 624 +
Chr2	stalkie_big_nohaplotig	CDS	111571658	111571845	.	-	2	Parent=FBgn0038453.1.mrna1;Target=FBgn0038453.1 227 414 +
Chr2	stalkie_big_nohaplotig	CDS	111571900	111572083	.	-	0	Parent=FBgn0038453.1.mrna1;Target=FBgn0038453.1 43 226 +
Chr2	stalkie_big_nohaplotig	CDS	111572151	111572192	.	-	0	Parent=FBgn0038453.1.mrna1;Target=FBgn0038453.1 1 42 +
Chr2	gffcl	locus	111583763	111594930	.	-	.	ID=RLOC_00020615;geneIDs=FBgn0040001.1.path1;transcripts=FBgn0040001.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111583763	111594930	.	-	.	ID=FBgn0040001.1.mrna1;geneID=FBgn0040001.1.path1;Name=FBgn0040001.1;Dir=sensecoverage=100.0;identity=100.0;matches=5807;mismatches=0;indels=1;unknowns=0;Target=FBgn0040001.1 3 80 +;locus=RLOC_00020615
Chr2	stalkie_big_nohaplotig	exon	111583763	111584416	100	-	.	Parent=FBgn0040001.1.mrna1;Target=FBgn0040001.1 5155 5808 +
Chr2	stalkie_big_nohaplotig	exon	111584480	111585569	100	-	.	Parent=FBgn0040001.1.mrna1;Target=FBgn0040001.1 4065 5154 +
Chr2	stalkie_big_nohaplotig	exon	111590089	111590438	100	-	.	Parent=FBgn0040001.1.mrna1;Target=FBgn0040001.1 3715 4064 +
Chr2	stalkie_big_nohaplotig	exon	111590496	111590770	100	-	.	Parent=FBgn0040001.1.mrna1;Target=FBgn0040001.1 3440 3714 +
Chr2	stalkie_big_nohaplotig	exon	111590826	111591438	100	-	.	Parent=FBgn0040001.1.mrna1;Target=FBgn0040001.1 2827 3439 +
Chr2	stalkie_big_nohaplotig	exon	111591504	111592787	100	-	.	Parent=FBgn0040001.1.mrna1;Target=FBgn0040001.1 1543 2826 +
Chr2	stalkie_big_nohaplotig	exon	111593333	111593756	100	-	.	Parent=FBgn0040001.1.mrna1;Target=FBgn0040001.1 1119 1542 +
Chr2	stalkie_big_nohaplotig	exon	111593814	111594930	99	-	.	Parent=FBgn0040001.1.mrna1;Target=FBgn0040001.1 1 1118 +
Chr2	stalkie_big_nohaplotig	CDS	111594852	111594928	.	-	0	Parent=FBgn0040001.1.mrna1
Chr2	gffcl	locus	111602068	111605944	.	-	.	ID=RLOC_00020616;geneIDs=FBgn0039272.1.path1;transcripts=FBgn0039272.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111602068	111605944	.	-	.	ID=FBgn0039272.1.mrna1;geneID=FBgn0039272.1.path1;Name=FBgn0039272.1;Dir=sensecoverage=100.0;identity=100.0;matches=1053;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020616
Chr2	stalkie_big_nohaplotig	exon	111602068	111602420	100	-	.	Parent=FBgn0039272.1.mrna1;Target=FBgn0039272.1 701 1053 +
Chr2	stalkie_big_nohaplotig	exon	111602859	111603245	100	-	.	Parent=FBgn0039272.1.mrna1;Target=FBgn0039272.1 314 700 +
Chr2	stalkie_big_nohaplotig	exon	111605632	111605944	100	-	.	Parent=FBgn0039272.1.mrna1;Target=FBgn0039272.1 1 313 +
Chr2	stalkie_big_nohaplotig	CDS	111602068	111602420	.	-	2	Parent=FBgn0039272.1.mrna1;Target=FBgn0039272.1 701 1053 +
Chr2	stalkie_big_nohaplotig	CDS	111602859	111603245	.	-	2	Parent=FBgn0039272.1.mrna1;Target=FBgn0039272.1 314 700 +
Chr2	stalkie_big_nohaplotig	CDS	111605632	111605944	.	-	0	Parent=FBgn0039272.1.mrna1;Target=FBgn0039272.1 1 313 +
Chr2	gffcl	locus	111618220	111632162	.	+	.	ID=RLOC_00020617;geneIDs=FBgn0031868.1.path1;transcripts=FBgn0031868.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111618220	111632162	.	+	.	ID=FBgn0031868.1.mrna1;geneID=FBgn0031868.1.path1;Name=FBgn0031868.1;Dir=sensecoverage=100.0;identity=100.0;matches=2658;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020617
Chr2	stalkie_big_nohaplotig	exon	111618220	111618306	100	+	.	Parent=FBgn0031868.1.mrna1;Target=FBgn0031868.1 1 87 +
Chr2	stalkie_big_nohaplotig	exon	111619539	111619893	100	+	.	Parent=FBgn0031868.1.mrna1;Target=FBgn0031868.1 88 442 +
Chr2	stalkie_big_nohaplotig	exon	111619953	111621256	100	+	.	Parent=FBgn0031868.1.mrna1;Target=FBgn0031868.1 443 1746 +
Chr2	stalkie_big_nohaplotig	exon	111622252	111622341	100	+	.	Parent=FBgn0031868.1.mrna1;Target=FBgn0031868.1 1747 1836 +
Chr2	stalkie_big_nohaplotig	exon	111622633	111622789	100	+	.	Parent=FBgn0031868.1.mrna1;Target=FBgn0031868.1 1837 1993 +
Chr2	stalkie_big_nohaplotig	exon	111624145	111624325	100	+	.	Parent=FBgn0031868.1.mrna1;Target=FBgn0031868.1 1994 2174 +
Chr2	stalkie_big_nohaplotig	exon	111626254	111626438	100	+	.	Parent=FBgn0031868.1.mrna1;Target=FBgn0031868.1 2175 2359 +
Chr2	stalkie_big_nohaplotig	exon	111628728	111628847	100	+	.	Parent=FBgn0031868.1.mrna1;Target=FBgn0031868.1 2360 2479 +
Chr2	stalkie_big_nohaplotig	exon	111631984	111632162	100	+	.	Parent=FBgn0031868.1.mrna1;Target=FBgn0031868.1 2480 2658 +
Chr2	stalkie_big_nohaplotig	CDS	111618220	111618306	.	+	0	Parent=FBgn0031868.1.mrna1;Target=FBgn0031868.1 1 87 +
Chr2	stalkie_big_nohaplotig	CDS	111619539	111619893	.	+	0	Parent=FBgn0031868.1.mrna1;Target=FBgn0031868.1 88 442 +
Chr2	stalkie_big_nohaplotig	CDS	111619953	111621256	.	+	2	Parent=FBgn0031868.1.mrna1;Target=FBgn0031868.1 443 1746 +
Chr2	stalkie_big_nohaplotig	CDS	111622252	111622341	.	+	0	Parent=FBgn0031868.1.mrna1;Target=FBgn0031868.1 1747 1836 +
Chr2	stalkie_big_nohaplotig	CDS	111622633	111622789	.	+	0	Parent=FBgn0031868.1.mrna1;Target=FBgn0031868.1 1837 1993 +
Chr2	stalkie_big_nohaplotig	CDS	111624145	111624325	.	+	2	Parent=FBgn0031868.1.mrna1;Target=FBgn0031868.1 1994 2174 +
Chr2	stalkie_big_nohaplotig	CDS	111626254	111626438	.	+	1	Parent=FBgn0031868.1.mrna1;Target=FBgn0031868.1 2175 2359 +
Chr2	stalkie_big_nohaplotig	CDS	111628728	111628847	.	+	2	Parent=FBgn0031868.1.mrna1;Target=FBgn0031868.1 2360 2479 +
Chr2	stalkie_big_nohaplotig	CDS	111631984	111632162	.	+	2	Parent=FBgn0031868.1.mrna1;Target=FBgn0031868.1 2480 2658 +
Chr2	gffcl	locus	111642626	111676926	.	-	.	ID=RLOC_00020618;geneIDs=FBgn0028993.1.path1,comp119254_c0_seq1.path1;transcripts=FBgn0028993.1.mrna1,comp119254_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111642626	111676926	.	-	.	ID=FBgn0028993.1.mrna1;geneID=FBgn0028993.1.path1;Name=FBgn0028993.1;Dir=sensecoverage=100.0;identity=100.0;matches=1404;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020618
Chr2	stalkie_big_nohaplotig	exon	111642626	111643060	100	-	.	Parent=FBgn0028993.1.mrna1;Target=FBgn0028993.1 970 1404 +
Chr2	stalkie_big_nohaplotig	exon	111644354	111644440	100	-	.	Parent=FBgn0028993.1.mrna1;Target=FBgn0028993.1 883 969 +
Chr2	stalkie_big_nohaplotig	exon	111653036	111653131	100	-	.	Parent=FBgn0028993.1.mrna1;Target=FBgn0028993.1 787 882 +
Chr2	stalkie_big_nohaplotig	exon	111665985	111666136	100	-	.	Parent=FBgn0028993.1.mrna1;Target=FBgn0028993.1 635 786 +
Chr2	stalkie_big_nohaplotig	exon	111675297	111675508	100	-	.	Parent=FBgn0028993.1.mrna1;Target=FBgn0028993.1 423 634 +
Chr2	stalkie_big_nohaplotig	exon	111676505	111676926	100	-	.	Parent=FBgn0028993.1.mrna1;Target=FBgn0028993.1 1 422 +
Chr2	stalkie_big_nohaplotig	CDS	111642626	111643060	.	-	0	Parent=FBgn0028993.1.mrna1;Target=FBgn0028993.1 970 1404 +
Chr2	stalkie_big_nohaplotig	CDS	111644354	111644440	.	-	0	Parent=FBgn0028993.1.mrna1;Target=FBgn0028993.1 883 969 +
Chr2	stalkie_big_nohaplotig	CDS	111653036	111653131	.	-	0	Parent=FBgn0028993.1.mrna1;Target=FBgn0028993.1 787 882 +
Chr2	stalkie_big_nohaplotig	CDS	111665985	111666136	.	-	2	Parent=FBgn0028993.1.mrna1;Target=FBgn0028993.1 635 786 +
Chr2	stalkie_big_nohaplotig	CDS	111675297	111675508	.	-	1	Parent=FBgn0028993.1.mrna1;Target=FBgn0028993.1 423 634 +
Chr2	stalkie_big_nohaplotig	CDS	111676505	111676926	.	-	0	Parent=FBgn0028993.1.mrna1;Target=FBgn0028993.1 1 422 +
Chr2	stalkie_big_nohaplotig	mRNA	111643414	111644377	.	-	.	ID=comp119254_c0_seq1.mrna1;geneID=comp119254_c0_seq1.path1;Name=comp119254_c0_seq1;Dir=indeterminatecoverage=98.7;identity=100.0;matches=964;mismatches=0;indels=0;unknowns=0;Target=comp119254_c0_seq1 964 1 .;CDS_Target=comp119254_c0_seq1 646 524 .;locus=RLOC_00020618
Chr2	stalkie_big_nohaplotig	exon	111643414	111644377	100	-	.	Parent=comp119254_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111643732	111643854	.	-	0	Parent=comp119254_c0_seq1.mrna1
Chr2	gffcl	locus	111644700	111645571	.	.	.	ID=RLOC_00020619;geneIDs=comp144633_c0_seq1.path1,comp144964_c0_seq1.path1;transcripts=comp144633_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111644700	111645215	.	+	.	ID=comp144633_c0_seq1.mrna1;geneID=comp144633_c0_seq1.path1;Name=comp144633_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.1;matches=506;mismatches=10;indels=0;unknowns=0;Target=comp144633_c0_seq1 516 1 .;CDS_Target=comp144633_c0_seq1 435 283 .;locus=RLOC_00020619
Chr2	stalkie_big_nohaplotig	exon	111644700	111645215	98	+	.	Parent=comp144633_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111644982	111645134	.	+	0	Parent=comp144633_c0_seq1.mrna1
Chr2	gffcl	locus	111645971	111646964	.	-	.	ID=RLOC_00020620;geneIDs=comp157890_c0_seq1.path1;transcripts=comp157890_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111645971	111646964	.	-	.	ID=comp157890_c0_seq1.mrna1;geneID=comp157890_c0_seq1.path1;Name=comp157890_c0_seq1;Dir=indeterminatecoverage=97.2;identity=99.9;matches=993;mismatches=1;indels=0;unknowns=0;Target=comp157890_c0_seq1 1023 30 .;CDS_Target=comp157890_c0_seq1 352 251 .;locus=RLOC_00020620
Chr2	stalkie_big_nohaplotig	exon	111645971	111646964	99	-	.	Parent=comp157890_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111646642	111646743	.	-	0	Parent=comp157890_c0_seq1.mrna1
Chr2	gffcl	locus	111679232	111679925	.	+	.	ID=RLOC_00020621;geneIDs=comp153025_c4_seq1.path1;transcripts=comp153025_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111679232	111679925	.	+	.	ID=comp153025_c4_seq1.mrna1;geneID=comp153025_c4_seq1.path1;Name=comp153025_c4_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=633;mismatches=0;indels=0;unknowns=0;Target=comp153025_c4_seq1 301 477 +;locus=RLOC_00020621
Chr2	stalkie_big_nohaplotig	exon	111679232	111679355	100	+	.	Parent=comp153025_c4_seq1.mrna1;Target=comp153025_c4_seq1 1 124 +
Chr2	stalkie_big_nohaplotig	exon	111679417	111679925	100	+	.	Parent=comp153025_c4_seq1.mrna1;Target=comp153025_c4_seq1 125 633 +
Chr2	stalkie_big_nohaplotig	CDS	111679593	111679769	.	+	0	Parent=comp153025_c4_seq1.mrna1
Chr2	gffcl	locus	111684338	111684751	.	-	.	ID=RLOC_00020622;geneIDs=comp139293_c0_seq1.path1;transcripts=comp139293_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111684338	111684751	.	-	.	ID=comp139293_c0_seq1.mrna1;geneID=comp139293_c0_seq1.path1;Name=comp139293_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=414;mismatches=0;indels=0;unknowns=0;Target=comp139293_c0_seq1 414 1 .;CDS_Target=comp139293_c0_seq1 184 2 .;locus=RLOC_00020622
Chr2	stalkie_big_nohaplotig	exon	111684338	111684751	100	-	.	Parent=comp139293_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111684568	111684750	.	-	0	Parent=comp139293_c0_seq1.mrna1
Chr2	gffcl	locus	111686621	111686995	.	+	.	ID=RLOC_00020623;geneIDs=comp137868_c0_seq1.path1;transcripts=comp137868_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111686621	111686995	.	+	.	ID=comp137868_c0_seq1.mrna1;geneID=comp137868_c0_seq1.path1;Name=comp137868_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=375;mismatches=0;indels=0;unknowns=0;Target=comp137868_c0_seq1 375 1 .;CDS_Target=comp137868_c0_seq1 180 100 .;locus=RLOC_00020623
Chr2	stalkie_big_nohaplotig	exon	111686621	111686995	100	+	.	Parent=comp137868_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111686720	111686800	.	+	0	Parent=comp137868_c0_seq1.mrna1
Chr2	gffcl	locus	111687095	111687684	.	-	.	ID=RLOC_00020624;geneIDs=comp145647_c0_seq1.path1;transcripts=comp145647_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111687095	111687684	.	-	.	ID=comp145647_c0_seq1.mrna1;geneID=comp145647_c0_seq1.path1;Name=comp145647_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=590;mismatches=0;indels=1;unknowns=0;Target=comp145647_c0_seq1 591 1 .;CDS_Target=comp145647_c0_seq1 128 3 .;locus=RLOC_00020624
Chr2	stalkie_big_nohaplotig	exon	111687095	111687684	99	-	.	Parent=comp145647_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111687557	111687682	.	-	0	Parent=comp145647_c0_seq1.mrna1
Chr2	gffcl	locus	111695216	111695565	.	-	.	ID=RLOC_00020625;geneIDs=comp113313_c1_seq1.path1;transcripts=comp113313_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111695216	111695565	.	-	.	ID=comp113313_c1_seq1.mrna1;geneID=comp113313_c1_seq1.path1;Name=comp113313_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=350;mismatches=0;indels=0;unknowns=0;Target=comp113313_c1_seq1 350 1 .;CDS_Target=comp113313_c1_seq1 180 1 .;locus=RLOC_00020625
Chr2	stalkie_big_nohaplotig	exon	111695216	111695565	100	-	.	Parent=comp113313_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111695386	111695565	.	-	0	Parent=comp113313_c1_seq1.mrna1
Chr2	gffcl	locus	111698249	111702657	.	+	.	ID=RLOC_00020626;geneIDs=FBgn0032864.1.path1,comp145697_c0_seq1.path1;transcripts=FBgn0032864.1.mrna1,comp145697_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111698249	111702657	.	+	.	ID=FBgn0032864.1.mrna1;geneID=FBgn0032864.1.path1;Name=FBgn0032864.1;Dir=sensecoverage=100.0;identity=99.9;matches=1450;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020626
Chr2	stalkie_big_nohaplotig	exon	111698249	111698864	100	+	.	Parent=FBgn0032864.1.mrna1;Target=FBgn0032864.1 1 616 +
Chr2	stalkie_big_nohaplotig	exon	111699865	111699967	100	+	.	Parent=FBgn0032864.1.mrna1;Target=FBgn0032864.1 617 719 +
Chr2	stalkie_big_nohaplotig	exon	111701204	111701301	100	+	.	Parent=FBgn0032864.1.mrna1;Target=FBgn0032864.1 720 817 +
Chr2	stalkie_big_nohaplotig	exon	111701650	111701792	100	+	.	Parent=FBgn0032864.1.mrna1;Target=FBgn0032864.1 818 960 +
Chr2	stalkie_big_nohaplotig	exon	111702052	111702326	99	+	.	Parent=FBgn0032864.1.mrna1;Target=FBgn0032864.1 961 1235 +
Chr2	stalkie_big_nohaplotig	exon	111702389	111702533	100	+	.	Parent=FBgn0032864.1.mrna1;Target=FBgn0032864.1 1236 1380 +
Chr2	stalkie_big_nohaplotig	exon	111702586	111702657	100	+	.	Parent=FBgn0032864.1.mrna1;Target=FBgn0032864.1 1381 1452 +
Chr2	stalkie_big_nohaplotig	CDS	111698249	111698864	.	+	0	Parent=FBgn0032864.1.mrna1;Target=FBgn0032864.1 1 616 +
Chr2	stalkie_big_nohaplotig	CDS	111699865	111699967	.	+	2	Parent=FBgn0032864.1.mrna1;Target=FBgn0032864.1 617 719 +
Chr2	stalkie_big_nohaplotig	CDS	111701204	111701301	.	+	1	Parent=FBgn0032864.1.mrna1;Target=FBgn0032864.1 720 817 +
Chr2	stalkie_big_nohaplotig	CDS	111701650	111701792	.	+	2	Parent=FBgn0032864.1.mrna1;Target=FBgn0032864.1 818 960 +
Chr2	stalkie_big_nohaplotig	CDS	111702052	111702326	.	+	0	Parent=FBgn0032864.1.mrna1;Target=FBgn0032864.1 961 1235 +
Chr2	stalkie_big_nohaplotig	CDS	111702389	111702533	.	+	1	Parent=FBgn0032864.1.mrna1;Target=FBgn0032864.1 1236 1380 +
Chr2	stalkie_big_nohaplotig	CDS	111702586	111702657	.	+	0	Parent=FBgn0032864.1.mrna1;Target=FBgn0032864.1 1381 1452 +
Chr2	stalkie_big_nohaplotig	mRNA	111701278	111701636	.	+	.	ID=comp145697_c0_seq1.mrna1;geneID=comp145697_c0_seq1.path1;Name=comp145697_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=351;mismatches=2;indels=6;unknowns=0;Target=comp145697_c0_seq1 353 1 .;CDS_Target=comp145697_c0_seq1 71 3 .;locus=RLOC_00020626
Chr2	stalkie_big_nohaplotig	exon	111701278	111701636	97	+	.	Parent=comp145697_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111701280	111701348	.	+	0	Parent=comp145697_c0_seq1.mrna1
Chr2	gffcl	locus	111704302	111707011	.	+	.	ID=RLOC_00020627;geneIDs=FBgn0039274.1.path1;transcripts=FBgn0039274.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111704302	111707011	.	+	.	ID=FBgn0039274.1.mrna1;geneID=FBgn0039274.1.path1;Name=FBgn0039274.1;Dir=sensecoverage=100.0;identity=100.0;matches=900;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020627
Chr2	stalkie_big_nohaplotig	exon	111704302	111704494	100	+	.	Parent=FBgn0039274.1.mrna1;Target=FBgn0039274.1 1 193 +
Chr2	stalkie_big_nohaplotig	exon	111706305	111707011	100	+	.	Parent=FBgn0039274.1.mrna1;Target=FBgn0039274.1 194 900 +
Chr2	stalkie_big_nohaplotig	CDS	111704302	111704494	.	+	0	Parent=FBgn0039274.1.mrna1;Target=FBgn0039274.1 1 193 +
Chr2	stalkie_big_nohaplotig	CDS	111706305	111707011	.	+	2	Parent=FBgn0039274.1.mrna1;Target=FBgn0039274.1 194 900 +
Chr2	gffcl	locus	111709860	111716652	.	+	.	ID=RLOC_00020628;geneIDs=FBgn0039261.1.path1;transcripts=FBgn0039261.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111709860	111716652	.	+	.	ID=FBgn0039261.1.mrna1;geneID=FBgn0039261.1.path1;Name=FBgn0039261.1;Dir=sensecoverage=100.0;identity=100.0;matches=2052;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020628
Chr2	stalkie_big_nohaplotig	exon	111709860	111709892	100	+	.	Parent=FBgn0039261.1.mrna1;Target=FBgn0039261.1 1 33 +
Chr2	stalkie_big_nohaplotig	exon	111709960	111709981	100	+	.	Parent=FBgn0039261.1.mrna1;Target=FBgn0039261.1 34 55 +
Chr2	stalkie_big_nohaplotig	exon	111710079	111710171	100	+	.	Parent=FBgn0039261.1.mrna1;Target=FBgn0039261.1 56 148 +
Chr2	stalkie_big_nohaplotig	exon	111710238	111710342	100	+	.	Parent=FBgn0039261.1.mrna1;Target=FBgn0039261.1 149 253 +
Chr2	stalkie_big_nohaplotig	exon	111712506	111712627	100	+	.	Parent=FBgn0039261.1.mrna1;Target=FBgn0039261.1 254 375 +
Chr2	stalkie_big_nohaplotig	exon	111712684	111713462	100	+	.	Parent=FBgn0039261.1.mrna1;Target=FBgn0039261.1 376 1154 +
Chr2	stalkie_big_nohaplotig	exon	111715755	111716652	100	+	.	Parent=FBgn0039261.1.mrna1;Target=FBgn0039261.1 1155 2052 +
Chr2	stalkie_big_nohaplotig	CDS	111709860	111709892	.	+	0	Parent=FBgn0039261.1.mrna1;Target=FBgn0039261.1 1 33 +
Chr2	stalkie_big_nohaplotig	CDS	111709960	111709981	.	+	0	Parent=FBgn0039261.1.mrna1;Target=FBgn0039261.1 34 55 +
Chr2	stalkie_big_nohaplotig	CDS	111710079	111710171	.	+	2	Parent=FBgn0039261.1.mrna1;Target=FBgn0039261.1 56 148 +
Chr2	stalkie_big_nohaplotig	CDS	111710238	111710342	.	+	2	Parent=FBgn0039261.1.mrna1;Target=FBgn0039261.1 149 253 +
Chr2	stalkie_big_nohaplotig	CDS	111712506	111712627	.	+	2	Parent=FBgn0039261.1.mrna1;Target=FBgn0039261.1 254 375 +
Chr2	stalkie_big_nohaplotig	CDS	111712684	111713462	.	+	0	Parent=FBgn0039261.1.mrna1;Target=FBgn0039261.1 376 1154 +
Chr2	stalkie_big_nohaplotig	CDS	111715755	111716652	.	+	1	Parent=FBgn0039261.1.mrna1;Target=FBgn0039261.1 1155 2052 +
Chr2	gffcl	locus	111725814	111727493	.	+	.	ID=RLOC_00020629;geneIDs=FBgn0263977.1.path1;transcripts=FBgn0263977.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111725814	111727493	.	+	.	ID=FBgn0263977.1.mrna1;geneID=FBgn0263977.1.path1;Name=FBgn0263977.1;Dir=sensecoverage=100.0;identity=100.0;matches=546;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020629
Chr2	stalkie_big_nohaplotig	exon	111725814	111725826	100	+	.	Parent=FBgn0263977.1.mrna1;Target=FBgn0263977.1 1 13 +
Chr2	stalkie_big_nohaplotig	exon	111725929	111726086	100	+	.	Parent=FBgn0263977.1.mrna1;Target=FBgn0263977.1 14 171 +
Chr2	stalkie_big_nohaplotig	exon	111727059	111727236	100	+	.	Parent=FBgn0263977.1.mrna1;Target=FBgn0263977.1 172 349 +
Chr2	stalkie_big_nohaplotig	exon	111727297	111727493	100	+	.	Parent=FBgn0263977.1.mrna1;Target=FBgn0263977.1 350 546 +
Chr2	stalkie_big_nohaplotig	CDS	111725814	111725826	.	+	0	Parent=FBgn0263977.1.mrna1;Target=FBgn0263977.1 1 13 +
Chr2	stalkie_big_nohaplotig	CDS	111725929	111726086	.	+	2	Parent=FBgn0263977.1.mrna1;Target=FBgn0263977.1 14 171 +
Chr2	stalkie_big_nohaplotig	CDS	111727059	111727236	.	+	0	Parent=FBgn0263977.1.mrna1;Target=FBgn0263977.1 172 349 +
Chr2	stalkie_big_nohaplotig	CDS	111727297	111727493	.	+	2	Parent=FBgn0263977.1.mrna1;Target=FBgn0263977.1 350 546 +
Chr2	gffcl	locus	111729938	111730633	.	+	.	ID=RLOC_00020630;geneIDs=FBgn0039879.path1;transcripts=FBgn0039879.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111729938	111730633	.	+	.	ID=FBgn0039879.mrna1;geneID=FBgn0039879.path1;Name=FBgn0039879;Dir=indeterminatecoverage=100.0;identity=99.7;matches=694;mismatches=2;indels=0;unknowns=0;Target=FBgn0039879 696 1 .;locus=RLOC_00020630
Chr2	stalkie_big_nohaplotig	exon	111729938	111730633	99	+	.	Parent=FBgn0039879.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111729938	111730633	.	+	0	Parent=FBgn0039879.mrna1
Chr2	gffcl	locus	111733215	111737596	.	+	.	ID=RLOC_00020631;geneIDs=FBgn0037723.1.path1;transcripts=FBgn0037723.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111733215	111737596	.	+	.	ID=FBgn0037723.1.mrna1;geneID=FBgn0037723.1.path1;Name=FBgn0037723.1;Dir=sensecoverage=100.0;identity=99.9;matches=911;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020631
Chr2	stalkie_big_nohaplotig	exon	111733215	111733393	100	+	.	Parent=FBgn0037723.1.mrna1;Target=FBgn0037723.1 1 179 +
Chr2	stalkie_big_nohaplotig	exon	111736864	111737596	99	+	.	Parent=FBgn0037723.1.mrna1;Target=FBgn0037723.1 180 912 +
Chr2	stalkie_big_nohaplotig	CDS	111733215	111733393	.	+	0	Parent=FBgn0037723.1.mrna1;Target=FBgn0037723.1 1 179 +
Chr2	stalkie_big_nohaplotig	CDS	111736864	111737596	.	+	1	Parent=FBgn0037723.1.mrna1;Target=FBgn0037723.1 180 912 +
Chr2	gffcl	locus	111752704	111763467	.	+	.	ID=RLOC_00020633;geneIDs=FBgn0058470.1.path1;transcripts=FBgn0058470.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111752704	111763467	.	+	.	ID=FBgn0058470.1.mrna1;geneID=FBgn0058470.1.path1;Name=FBgn0058470.1;Dir=sensecoverage=99.7;identity=99.9;matches=2767;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020633
Chr2	stalkie_big_nohaplotig	exon	111752704	111752769	100	+	.	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 10 75 +
Chr2	stalkie_big_nohaplotig	exon	111753142	111753386	100	+	.	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 76 320 +
Chr2	stalkie_big_nohaplotig	exon	111754160	111754427	100	+	.	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 321 588 +
Chr2	stalkie_big_nohaplotig	exon	111757382	111757461	100	+	.	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 589 668 +
Chr2	stalkie_big_nohaplotig	exon	111758875	111759049	100	+	.	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 669 843 +
Chr2	stalkie_big_nohaplotig	exon	111759114	111759259	98	+	.	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 844 989 +
Chr2	stalkie_big_nohaplotig	exon	111760138	111760288	100	+	.	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 990 1140 +
Chr2	stalkie_big_nohaplotig	exon	111760783	111761474	100	+	.	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 1141 1832 +
Chr2	stalkie_big_nohaplotig	exon	111761535	111761718	100	+	.	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 1833 2016 +
Chr2	stalkie_big_nohaplotig	exon	111762602	111762798	100	+	.	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 2017 2213 +
Chr2	stalkie_big_nohaplotig	exon	111762853	111763167	100	+	.	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 2214 2528 +
Chr2	stalkie_big_nohaplotig	exon	111763218	111763467	100	+	.	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 2529 2778 +
Chr2	stalkie_big_nohaplotig	CDS	111752704	111752769	.	+	0	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 10 75 +
Chr2	stalkie_big_nohaplotig	CDS	111753142	111753386	.	+	0	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 76 320 +
Chr2	stalkie_big_nohaplotig	CDS	111754160	111754427	.	+	1	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 321 588 +
Chr2	stalkie_big_nohaplotig	CDS	111757382	111757461	.	+	0	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 589 668 +
Chr2	stalkie_big_nohaplotig	CDS	111758875	111759049	.	+	1	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 669 843 +
Chr2	stalkie_big_nohaplotig	CDS	111759114	111759259	.	+	0	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 844 989 +
Chr2	stalkie_big_nohaplotig	CDS	111760138	111760288	.	+	1	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 990 1140 +
Chr2	stalkie_big_nohaplotig	CDS	111760783	111761474	.	+	0	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 1141 1832 +
Chr2	stalkie_big_nohaplotig	CDS	111761535	111761718	.	+	1	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 1833 2016 +
Chr2	stalkie_big_nohaplotig	CDS	111762602	111762798	.	+	0	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 2017 2213 +
Chr2	stalkie_big_nohaplotig	CDS	111762853	111763167	.	+	1	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 2214 2528 +
Chr2	stalkie_big_nohaplotig	CDS	111763218	111763467	.	+	1	Parent=FBgn0058470.1.mrna1;Target=FBgn0058470.1 2529 2778 +
Chr2	gffcl	locus	111766270	111766623	.	+	.	ID=RLOC_00020634;geneIDs=comp116976_c0_seq1.path1;transcripts=comp116976_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111766270	111766623	.	+	.	ID=comp116976_c0_seq1.mrna1;geneID=comp116976_c0_seq1.path1;Name=comp116976_c0_seq1;Dir=indeterminatecoverage=99.4;identity=100.0;matches=354;mismatches=0;indels=0;unknowns=0;Target=comp116976_c0_seq1 354 1 .;CDS_Target=comp116976_c0_seq1 69 1 .;locus=RLOC_00020634
Chr2	stalkie_big_nohaplotig	exon	111766270	111766623	100	+	.	Parent=comp116976_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111766270	111766338	.	+	0	Parent=comp116976_c0_seq1.mrna1
Chr2	gffcl	locus	111766706	111767914	.	+	.	ID=RLOC_00020635;geneIDs=comp157149_c0_seq1.path1;transcripts=comp157149_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111766706	111767914	.	+	.	ID=comp157149_c0_seq1.mrna1;geneID=comp157149_c0_seq1.path1;Name=comp157149_c0_seq1;Dir=indeterminatecoverage=99.9;identity=95.7;matches=1201;mismatches=8;indels=46;unknowns=0;Target=comp157149_c0_seq1 1256 2 .;CDS_Target=comp157149_c0_seq1 1115 1098 .;locus=RLOC_00020635
Chr2	stalkie_big_nohaplotig	exon	111766706	111767914	95	+	.	Parent=comp157149_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111767765	111767782	.	+	0	Parent=comp157149_c0_seq1.mrna1
Chr2	gffcl	locus	111767989	111768886	.	+	.	ID=RLOC_00020636;geneIDs=comp154164_c0_seq1.path1;transcripts=comp154164_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111767989	111768886	.	+	.	ID=comp154164_c0_seq1.mrna1;geneID=comp154164_c0_seq1.path1;Name=comp154164_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=898;mismatches=0;indels=0;unknowns=0;Target=comp154164_c0_seq1 898 1 .;CDS_Target=comp154164_c0_seq1 356 246 .;locus=RLOC_00020636
Chr2	stalkie_big_nohaplotig	exon	111767989	111768886	100	+	.	Parent=comp154164_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111768234	111768344	.	+	0	Parent=comp154164_c0_seq1.mrna1
Chr2	gffcl	locus	111769167	111780805	.	+	.	ID=RLOC_00020637;geneIDs=FBgn0035968.2.path1;transcripts=FBgn0035968.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111769167	111780805	.	+	.	ID=FBgn0035968.2.mrna1;geneID=FBgn0035968.2.path1;Name=FBgn0035968.2;Dir=sensecoverage=100.0;identity=99.9;matches=1885;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020637
Chr2	stalkie_big_nohaplotig	exon	111769167	111769366	100	+	.	Parent=FBgn0035968.2.mrna1;Target=FBgn0035968.2 1 200 +
Chr2	stalkie_big_nohaplotig	exon	111777003	111777265	100	+	.	Parent=FBgn0035968.2.mrna1;Target=FBgn0035968.2 201 463 +
Chr2	stalkie_big_nohaplotig	exon	111777321	111777578	100	+	.	Parent=FBgn0035968.2.mrna1;Target=FBgn0035968.2 464 721 +
Chr2	stalkie_big_nohaplotig	exon	111777631	111777732	100	+	.	Parent=FBgn0035968.2.mrna1;Target=FBgn0035968.2 722 823 +
Chr2	stalkie_big_nohaplotig	exon	111777799	111778019	100	+	.	Parent=FBgn0035968.2.mrna1;Target=FBgn0035968.2 824 1044 +
Chr2	stalkie_big_nohaplotig	exon	111779076	111779515	100	+	.	Parent=FBgn0035968.2.mrna1;Target=FBgn0035968.2 1045 1484 +
Chr2	stalkie_big_nohaplotig	exon	111780349	111780523	100	+	.	Parent=FBgn0035968.2.mrna1;Target=FBgn0035968.2 1485 1659 +
Chr2	stalkie_big_nohaplotig	exon	111780578	111780805	99	+	.	Parent=FBgn0035968.2.mrna1;Target=FBgn0035968.2 1660 1887 +
Chr2	stalkie_big_nohaplotig	CDS	111769167	111769366	.	+	0	Parent=FBgn0035968.2.mrna1;Target=FBgn0035968.2 1 200 +
Chr2	stalkie_big_nohaplotig	CDS	111777003	111777265	.	+	1	Parent=FBgn0035968.2.mrna1;Target=FBgn0035968.2 201 463 +
Chr2	stalkie_big_nohaplotig	CDS	111777321	111777578	.	+	2	Parent=FBgn0035968.2.mrna1;Target=FBgn0035968.2 464 721 +
Chr2	stalkie_big_nohaplotig	CDS	111777631	111777732	.	+	2	Parent=FBgn0035968.2.mrna1;Target=FBgn0035968.2 722 823 +
Chr2	stalkie_big_nohaplotig	CDS	111777799	111778019	.	+	2	Parent=FBgn0035968.2.mrna1;Target=FBgn0035968.2 824 1044 +
Chr2	stalkie_big_nohaplotig	CDS	111779076	111779515	.	+	0	Parent=FBgn0035968.2.mrna1;Target=FBgn0035968.2 1045 1484 +
Chr2	stalkie_big_nohaplotig	CDS	111780349	111780523	.	+	1	Parent=FBgn0035968.2.mrna1;Target=FBgn0035968.2 1485 1659 +
Chr2	stalkie_big_nohaplotig	CDS	111780578	111780805	.	+	0	Parent=FBgn0035968.2.mrna1;Target=FBgn0035968.2 1660 1887 +
Chr2	gffcl	locus	111782080	111782707	.	+	.	ID=RLOC_00020639;geneIDs=comp116180_c0_seq1.path1;transcripts=comp116180_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111782080	111782707	.	+	.	ID=comp116180_c0_seq1.mrna1;geneID=comp116180_c0_seq1.path1;Name=comp116180_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=628;mismatches=0;indels=0;unknowns=0;Target=comp116180_c0_seq1 628 1 .;CDS_Target=comp116180_c0_seq1 156 67 .;locus=RLOC_00020639
Chr2	stalkie_big_nohaplotig	exon	111782080	111782707	100	+	.	Parent=comp116180_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111782146	111782235	.	+	0	Parent=comp116180_c0_seq1.mrna1
Chr2	gffcl	locus	111784780	111788167	.	-	.	ID=RLOC_00020640;geneIDs=CPIJ017423.2.path2;transcripts=CPIJ017423.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	111784780	111788167	.	-	.	ID=CPIJ017423.2.mrna2;geneID=CPIJ017423.2.path2;Name=CPIJ017423.2;Dir=indeterminatecoverage=100.0;identity=96.2;matches=1501;mismatches=45;indels=15;unknowns=0;Target=CPIJ017423.2 1551 517 .;locus=RLOC_00020640
Chr2	stalkie_big_nohaplotig	exon	111784780	111786049	98	-	.	Parent=CPIJ017423.2.mrna2;Target=CPIJ017423.2 1551 278 .
Chr2	stalkie_big_nohaplotig	exon	111786266	111786425	91	-	.	Parent=CPIJ017423.2.mrna2;Target=CPIJ017423.2 277 121 .
Chr2	stalkie_big_nohaplotig	exon	111786884	111786933	50	-	.	Parent=CPIJ017423.2.mrna2;Target=CPIJ017423.2 120 77 .
Chr2	stalkie_big_nohaplotig	exon	111788092	111788167	90	-	.	Parent=CPIJ017423.2.mrna2;Target=CPIJ017423.2 76 1 .
Chr2	stalkie_big_nohaplotig	CDS	111784780	111785815	.	-	0	Parent=CPIJ017423.2.mrna2
Chr2	gffcl	locus	111796290	111810499	.	+	.	ID=RLOC_00020641;geneIDs=FBgn0002431.1.path1;transcripts=FBgn0002431.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111796290	111810499	.	+	.	ID=FBgn0002431.1.mrna1;geneID=FBgn0002431.1.path1;Name=FBgn0002431.1;Dir=sensecoverage=100.0;identity=100.0;matches=8469;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020641
Chr2	stalkie_big_nohaplotig	exon	111796290	111796369	100	+	.	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 1 80 +
Chr2	stalkie_big_nohaplotig	exon	111796919	111797119	100	+	.	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 81 281 +
Chr2	stalkie_big_nohaplotig	exon	111797173	111797455	100	+	.	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 282 564 +
Chr2	stalkie_big_nohaplotig	exon	111797524	111797741	100	+	.	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 565 782 +
Chr2	stalkie_big_nohaplotig	exon	111797810	111798045	100	+	.	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 783 1018 +
Chr2	stalkie_big_nohaplotig	exon	111798112	111798302	100	+	.	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 1019 1209 +
Chr2	stalkie_big_nohaplotig	exon	111799404	111802766	100	+	.	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 1210 4572 +
Chr2	stalkie_big_nohaplotig	exon	111802835	111802982	100	+	.	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 4573 4720 +
Chr2	stalkie_big_nohaplotig	exon	111803069	111803302	100	+	.	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 4721 4954 +
Chr2	stalkie_big_nohaplotig	exon	111803687	111804153	100	+	.	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 4955 5421 +
Chr2	stalkie_big_nohaplotig	exon	111804209	111804404	100	+	.	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 5422 5617 +
Chr2	stalkie_big_nohaplotig	exon	111804666	111805358	100	+	.	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 5618 6310 +
Chr2	stalkie_big_nohaplotig	exon	111806018	111806977	100	+	.	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 6311 7270 +
Chr2	stalkie_big_nohaplotig	exon	111807032	111807105	100	+	.	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 7271 7344 +
Chr2	stalkie_big_nohaplotig	exon	111807164	111807492	100	+	.	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 7345 7673 +
Chr2	stalkie_big_nohaplotig	exon	111807548	111807754	100	+	.	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 7674 7880 +
Chr2	stalkie_big_nohaplotig	exon	111808141	111808288	100	+	.	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 7881 8028 +
Chr2	stalkie_big_nohaplotig	exon	111810000	111810230	100	+	.	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 8029 8259 +
Chr2	stalkie_big_nohaplotig	exon	111810290	111810499	100	+	.	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 8260 8469 +
Chr2	stalkie_big_nohaplotig	CDS	111796290	111796369	.	+	0	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 1 80 +
Chr2	stalkie_big_nohaplotig	CDS	111796919	111797119	.	+	1	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 81 281 +
Chr2	stalkie_big_nohaplotig	CDS	111797173	111797455	.	+	1	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 282 564 +
Chr2	stalkie_big_nohaplotig	CDS	111797524	111797741	.	+	0	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 565 782 +
Chr2	stalkie_big_nohaplotig	CDS	111797810	111798045	.	+	1	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 783 1018 +
Chr2	stalkie_big_nohaplotig	CDS	111798112	111798302	.	+	2	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 1019 1209 +
Chr2	stalkie_big_nohaplotig	CDS	111799404	111802766	.	+	0	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 1210 4572 +
Chr2	stalkie_big_nohaplotig	CDS	111802835	111802982	.	+	0	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 4573 4720 +
Chr2	stalkie_big_nohaplotig	CDS	111803069	111803302	.	+	2	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 4721 4954 +
Chr2	stalkie_big_nohaplotig	CDS	111803687	111804153	.	+	2	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 4955 5421 +
Chr2	stalkie_big_nohaplotig	CDS	111804209	111804404	.	+	0	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 5422 5617 +
Chr2	stalkie_big_nohaplotig	CDS	111804666	111805358	.	+	2	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 5618 6310 +
Chr2	stalkie_big_nohaplotig	CDS	111806018	111806977	.	+	2	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 6311 7270 +
Chr2	stalkie_big_nohaplotig	CDS	111807032	111807105	.	+	2	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 7271 7344 +
Chr2	stalkie_big_nohaplotig	CDS	111807164	111807492	.	+	0	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 7345 7673 +
Chr2	stalkie_big_nohaplotig	CDS	111807548	111807754	.	+	1	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 7674 7880 +
Chr2	stalkie_big_nohaplotig	CDS	111808141	111808288	.	+	1	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 7881 8028 +
Chr2	stalkie_big_nohaplotig	CDS	111810000	111810230	.	+	0	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 8029 8259 +
Chr2	stalkie_big_nohaplotig	CDS	111810290	111810499	.	+	0	Parent=FBgn0002431.1.mrna1;Target=FBgn0002431.1 8260 8469 +
Chr2	gffcl	locus	111808850	111809874	.	-	.	ID=RLOC_00020642;geneIDs=comp149307_c0_seq1.path1;transcripts=comp149307_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111808850	111809874	.	-	.	ID=comp149307_c0_seq1.mrna1;geneID=comp149307_c0_seq1.path1;Name=comp149307_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1024;mismatches=1;indels=0;unknowns=0;Target=comp149307_c0_seq1 1025 1 .;CDS_Target=comp149307_c0_seq1 588 469 .;locus=RLOC_00020642
Chr2	stalkie_big_nohaplotig	exon	111808850	111809874	99	-	.	Parent=comp149307_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111809287	111809406	.	-	0	Parent=comp149307_c0_seq1.mrna1
Chr2	gffcl	locus	111816504	111822119	.	+	.	ID=RLOC_00020643;geneIDs=FBgn0051357.1.path1;transcripts=FBgn0051357.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111816504	111822119	.	+	.	ID=FBgn0051357.1.mrna1;geneID=FBgn0051357.1.path1;Name=FBgn0051357.1;Dir=sensecoverage=100.0;identity=100.0;matches=1200;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020643
Chr2	stalkie_big_nohaplotig	exon	111816504	111816884	100	+	.	Parent=FBgn0051357.1.mrna1;Target=FBgn0051357.1 1 381 +
Chr2	stalkie_big_nohaplotig	exon	111816950	111817055	100	+	.	Parent=FBgn0051357.1.mrna1;Target=FBgn0051357.1 382 487 +
Chr2	stalkie_big_nohaplotig	exon	111818118	111818393	100	+	.	Parent=FBgn0051357.1.mrna1;Target=FBgn0051357.1 488 763 +
Chr2	stalkie_big_nohaplotig	exon	111819236	111819360	100	+	.	Parent=FBgn0051357.1.mrna1;Target=FBgn0051357.1 764 888 +
Chr2	stalkie_big_nohaplotig	exon	111821695	111821837	100	+	.	Parent=FBgn0051357.1.mrna1;Target=FBgn0051357.1 889 1031 +
Chr2	stalkie_big_nohaplotig	exon	111821896	111821968	100	+	.	Parent=FBgn0051357.1.mrna1;Target=FBgn0051357.1 1032 1104 +
Chr2	stalkie_big_nohaplotig	exon	111822024	111822119	100	+	.	Parent=FBgn0051357.1.mrna1;Target=FBgn0051357.1 1105 1200 +
Chr2	stalkie_big_nohaplotig	CDS	111816504	111816884	.	+	0	Parent=FBgn0051357.1.mrna1;Target=FBgn0051357.1 1 381 +
Chr2	stalkie_big_nohaplotig	CDS	111816950	111817055	.	+	0	Parent=FBgn0051357.1.mrna1;Target=FBgn0051357.1 382 487 +
Chr2	stalkie_big_nohaplotig	CDS	111818118	111818393	.	+	2	Parent=FBgn0051357.1.mrna1;Target=FBgn0051357.1 488 763 +
Chr2	stalkie_big_nohaplotig	CDS	111819236	111819360	.	+	2	Parent=FBgn0051357.1.mrna1;Target=FBgn0051357.1 764 888 +
Chr2	stalkie_big_nohaplotig	CDS	111821695	111821837	.	+	0	Parent=FBgn0051357.1.mrna1;Target=FBgn0051357.1 889 1031 +
Chr2	stalkie_big_nohaplotig	CDS	111821896	111821968	.	+	1	Parent=FBgn0051357.1.mrna1;Target=FBgn0051357.1 1032 1104 +
Chr2	stalkie_big_nohaplotig	CDS	111822024	111822119	.	+	0	Parent=FBgn0051357.1.mrna1;Target=FBgn0051357.1 1105 1200 +
Chr2	gffcl	locus	111820103	111821358	.	-	.	ID=RLOC_00020644;geneIDs=comp157772_c0_seq1.path1;transcripts=comp157772_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111820103	111821358	.	-	.	ID=comp157772_c0_seq1.mrna1;geneID=comp157772_c0_seq1.path1;Name=comp157772_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=1224;mismatches=32;indels=3;unknowns=0;Target=comp157772_c0_seq1 1259 1 .;CDS_Target=comp157772_c0_seq1 195 1 .;locus=RLOC_00020644
Chr2	stalkie_big_nohaplotig	exon	111820103	111821358	97	-	.	Parent=comp157772_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111821164	111821358	.	-	0	Parent=comp157772_c0_seq1.mrna1
Chr2	gffcl	locus	111826972	111827856	.	-	.	ID=RLOC_00020645;geneIDs=comp151436_c2_seq1.path1;transcripts=comp151436_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111826972	111827856	.	-	.	ID=comp151436_c2_seq1.mrna1;geneID=comp151436_c2_seq1.path1;Name=comp151436_c2_seq1;Dir=indeterminatecoverage=98.8;identity=99.3;matches=879;mismatches=6;indels=0;unknowns=0;Target=comp151436_c2_seq1 896 12 .;CDS_Target=comp151436_c2_seq1 254 123 .;locus=RLOC_00020645
Chr2	stalkie_big_nohaplotig	exon	111826972	111827856	99	-	.	Parent=comp151436_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111827614	111827745	.	-	0	Parent=comp151436_c2_seq1.mrna1
Chr2	gffcl	locus	111830303	111855966	.	.	.	ID=RLOC_00020646;geneIDs=FBgn0085378.1.path1,comp135740_c0_seq1.path1,comp143198_c0_seq1.path1;transcripts=FBgn0085378.1.mrna1,comp135740_c0_seq1.mrna1,comp143198_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111830303	111855966	.	+	.	ID=FBgn0085378.1.mrna1;geneID=FBgn0085378.1.path1;Name=FBgn0085378.1;Dir=sensecoverage=100.0;identity=100.0;matches=3495;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020646
Chr2	stalkie_big_nohaplotig	exon	111830303	111830460	100	+	.	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 1 158 +
Chr2	stalkie_big_nohaplotig	exon	111836144	111836396	100	+	.	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 159 411 +
Chr2	stalkie_big_nohaplotig	exon	111843547	111843887	100	+	.	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 412 752 +
Chr2	stalkie_big_nohaplotig	exon	111843951	111843998	100	+	.	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 753 800 +
Chr2	stalkie_big_nohaplotig	exon	111846412	111846571	100	+	.	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 801 960 +
Chr2	stalkie_big_nohaplotig	exon	111846623	111847437	100	+	.	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 961 1775 +
Chr2	stalkie_big_nohaplotig	exon	111847506	111847720	100	+	.	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 1776 1990 +
Chr2	stalkie_big_nohaplotig	exon	111849259	111849539	100	+	.	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 1991 2271 +
Chr2	stalkie_big_nohaplotig	exon	111850678	111850836	100	+	.	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 2272 2430 +
Chr2	stalkie_big_nohaplotig	exon	111850891	111851256	100	+	.	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 2431 2796 +
Chr2	stalkie_big_nohaplotig	exon	111852696	111852956	100	+	.	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 2797 3057 +
Chr2	stalkie_big_nohaplotig	exon	111853025	111853194	100	+	.	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 3058 3227 +
Chr2	stalkie_big_nohaplotig	exon	111855639	111855817	100	+	.	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 3228 3406 +
Chr2	stalkie_big_nohaplotig	exon	111855878	111855966	100	+	.	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 3407 3495 +
Chr2	stalkie_big_nohaplotig	CDS	111830303	111830460	.	+	0	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 1 158 +
Chr2	stalkie_big_nohaplotig	CDS	111836144	111836396	.	+	1	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 159 411 +
Chr2	stalkie_big_nohaplotig	CDS	111843547	111843887	.	+	0	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 412 752 +
Chr2	stalkie_big_nohaplotig	CDS	111843951	111843998	.	+	1	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 753 800 +
Chr2	stalkie_big_nohaplotig	CDS	111846412	111846571	.	+	1	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 801 960 +
Chr2	stalkie_big_nohaplotig	CDS	111846623	111847437	.	+	0	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 961 1775 +
Chr2	stalkie_big_nohaplotig	CDS	111847506	111847720	.	+	1	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 1776 1990 +
Chr2	stalkie_big_nohaplotig	CDS	111849259	111849539	.	+	2	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 1991 2271 +
Chr2	stalkie_big_nohaplotig	CDS	111850678	111850836	.	+	0	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 2272 2430 +
Chr2	stalkie_big_nohaplotig	CDS	111850891	111851256	.	+	0	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 2431 2796 +
Chr2	stalkie_big_nohaplotig	CDS	111852696	111852956	.	+	0	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 2797 3057 +
Chr2	stalkie_big_nohaplotig	CDS	111853025	111853194	.	+	0	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 3058 3227 +
Chr2	stalkie_big_nohaplotig	CDS	111855639	111855817	.	+	1	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 3228 3406 +
Chr2	stalkie_big_nohaplotig	CDS	111855878	111855966	.	+	2	Parent=FBgn0085378.1.mrna1;Target=FBgn0085378.1 3407 3495 +
Chr2	stalkie_big_nohaplotig	mRNA	111841767	111843570	.	+	.	ID=comp135740_c0_seq1.mrna1;geneID=comp135740_c0_seq1.path1;Name=comp135740_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=345;mismatches=0;indels=1;unknowns=0;Target=comp135740_c0_seq1 61 234 +;locus=RLOC_00020646
Chr2	stalkie_big_nohaplotig	exon	111841767	111842087	99	+	.	Parent=comp135740_c0_seq1.mrna1;Target=comp135740_c0_seq1 1 322 +
Chr2	stalkie_big_nohaplotig	exon	111843547	111843570	100	+	.	Parent=comp135740_c0_seq1.mrna1;Target=comp135740_c0_seq1 323 346 +
Chr2	stalkie_big_nohaplotig	CDS	111841827	111841999	.	+	0	Parent=comp135740_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111849517	111850701	.	-	.	ID=comp143198_c0_seq1.mrna1;geneID=comp143198_c0_seq1.path1;Name=comp143198_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1185;mismatches=0;indels=0;unknowns=0;Target=comp143198_c0_seq1 1185 1 .;CDS_Target=comp143198_c0_seq1 745 623 .;locus=RLOC_00020646
Chr2	stalkie_big_nohaplotig	exon	111849517	111850701	100	-	.	Parent=comp143198_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111849957	111850079	.	-	0	Parent=comp143198_c0_seq1.mrna1
Chr2	gffcl	locus	111854144	111855507	.	-	.	ID=RLOC_00020647;geneIDs=comp151453_c2_seq1.path1;transcripts=comp151453_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111854144	111855507	.	-	.	ID=comp151453_c2_seq1.mrna1;geneID=comp151453_c2_seq1.path1;Name=comp151453_c2_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=1342;mismatches=22;indels=0;unknowns=0;Target=comp151453_c2_seq1 1364 1 .;CDS_Target=comp151453_c2_seq1 1084 881 .;locus=RLOC_00020647
Chr2	stalkie_big_nohaplotig	exon	111854144	111855507	98	-	.	Parent=comp151453_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111854424	111854627	.	-	0	Parent=comp151453_c2_seq1.mrna1
Chr2	gffcl	locus	111883147	111884227	.	+	.	ID=RLOC_00020649;geneIDs=FBgn0028697.1.path1,comp108938_c0_seq1.path1;transcripts=FBgn0028697.1.mrna1,comp108938_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111883147	111884227	.	+	.	ID=FBgn0028697.1.mrna1;geneID=FBgn0028697.1.path1;Name=FBgn0028697.1;Dir=sensecoverage=100.0;identity=100.0;matches=660;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020649
Chr2	stalkie_big_nohaplotig	exon	111883147	111883174	100	+	.	Parent=FBgn0028697.1.mrna1;Target=FBgn0028697.1 1 28 +
Chr2	stalkie_big_nohaplotig	exon	111883410	111883738	100	+	.	Parent=FBgn0028697.1.mrna1;Target=FBgn0028697.1 29 357 +
Chr2	stalkie_big_nohaplotig	exon	111883925	111884227	100	+	.	Parent=FBgn0028697.1.mrna1;Target=FBgn0028697.1 358 660 +
Chr2	stalkie_big_nohaplotig	CDS	111883147	111883174	.	+	0	Parent=FBgn0028697.1.mrna1;Target=FBgn0028697.1 1 28 +
Chr2	stalkie_big_nohaplotig	CDS	111883410	111883738	.	+	2	Parent=FBgn0028697.1.mrna1;Target=FBgn0028697.1 29 357 +
Chr2	stalkie_big_nohaplotig	CDS	111883925	111884227	.	+	0	Parent=FBgn0028697.1.mrna1;Target=FBgn0028697.1 358 660 +
Chr2	stalkie_big_nohaplotig	mRNA	111883154	111883407	.	+	.	ID=comp108938_c0_seq1.mrna1;geneID=comp108938_c0_seq1.path1;Name=comp108938_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=254;mismatches=0;indels=0;unknowns=0;Target=comp108938_c0_seq1 254 1 .;CDS_Target=comp108938_c0_seq1 92 3 .;locus=RLOC_00020649
Chr2	stalkie_big_nohaplotig	exon	111883154	111883407	100	+	.	Parent=comp108938_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111883156	111883245	.	+	0	Parent=comp108938_c0_seq1.mrna1
Chr2	gffcl	locus	111886660	111888014	.	-	.	ID=RLOC_00020650;geneIDs=FBgn0039273.1.path1;transcripts=FBgn0039273.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111886660	111888014	.	-	.	ID=FBgn0039273.1.mrna1;geneID=FBgn0039273.1.path1;Name=FBgn0039273.1;Dir=sensecoverage=100.0;identity=100.0;matches=1197;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020650
Chr2	stalkie_big_nohaplotig	exon	111886660	111887313	100	-	.	Parent=FBgn0039273.1.mrna1;Target=FBgn0039273.1 544 1197 +
Chr2	stalkie_big_nohaplotig	exon	111887364	111887403	100	-	.	Parent=FBgn0039273.1.mrna1;Target=FBgn0039273.1 504 543 +
Chr2	stalkie_big_nohaplotig	exon	111887459	111887707	100	-	.	Parent=FBgn0039273.1.mrna1;Target=FBgn0039273.1 255 503 +
Chr2	stalkie_big_nohaplotig	exon	111887761	111888014	100	-	.	Parent=FBgn0039273.1.mrna1;Target=FBgn0039273.1 1 254 +
Chr2	stalkie_big_nohaplotig	CDS	111886660	111887313	.	-	0	Parent=FBgn0039273.1.mrna1;Target=FBgn0039273.1 544 1197 +
Chr2	stalkie_big_nohaplotig	CDS	111887364	111887403	.	-	1	Parent=FBgn0039273.1.mrna1;Target=FBgn0039273.1 504 543 +
Chr2	stalkie_big_nohaplotig	CDS	111887459	111887707	.	-	1	Parent=FBgn0039273.1.mrna1;Target=FBgn0039273.1 255 503 +
Chr2	stalkie_big_nohaplotig	CDS	111887761	111888014	.	-	0	Parent=FBgn0039273.1.mrna1;Target=FBgn0039273.1 1 254 +
Chr2	gffcl	locus	111891134	111892388	.	+	.	ID=RLOC_00020651;geneIDs=FBgn0039269.1.path1,comp121659_c0_seq1.path1;transcripts=FBgn0039269.1.mrna1,comp121659_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111891134	111892388	.	+	.	ID=FBgn0039269.1.mrna1;geneID=FBgn0039269.1.path1;Name=FBgn0039269.1;Dir=sensecoverage=100.0;identity=100.0;matches=651;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020651
Chr2	stalkie_big_nohaplotig	exon	111891134	111891236	100	+	.	Parent=FBgn0039269.1.mrna1;Target=FBgn0039269.1 1 103 +
Chr2	stalkie_big_nohaplotig	exon	111891345	111891611	100	+	.	Parent=FBgn0039269.1.mrna1;Target=FBgn0039269.1 104 370 +
Chr2	stalkie_big_nohaplotig	exon	111891668	111891801	100	+	.	Parent=FBgn0039269.1.mrna1;Target=FBgn0039269.1 371 504 +
Chr2	stalkie_big_nohaplotig	exon	111892242	111892388	100	+	.	Parent=FBgn0039269.1.mrna1;Target=FBgn0039269.1 505 651 +
Chr2	stalkie_big_nohaplotig	CDS	111891134	111891236	.	+	0	Parent=FBgn0039269.1.mrna1;Target=FBgn0039269.1 1 103 +
Chr2	stalkie_big_nohaplotig	CDS	111891345	111891611	.	+	2	Parent=FBgn0039269.1.mrna1;Target=FBgn0039269.1 104 370 +
Chr2	stalkie_big_nohaplotig	CDS	111891668	111891801	.	+	2	Parent=FBgn0039269.1.mrna1;Target=FBgn0039269.1 371 504 +
Chr2	stalkie_big_nohaplotig	CDS	111892242	111892388	.	+	0	Parent=FBgn0039269.1.mrna1;Target=FBgn0039269.1 505 651 +
Chr2	stalkie_big_nohaplotig	mRNA	111891945	111892263	.	+	.	ID=comp121659_c0_seq1.mrna1;geneID=comp121659_c0_seq1.path1;Name=comp121659_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=319;mismatches=0;indels=0;unknowns=0;Target=comp121659_c0_seq1 319 1 .;CDS_Target=comp121659_c0_seq1 134 54 .;locus=RLOC_00020651
Chr2	stalkie_big_nohaplotig	exon	111891945	111892263	100	+	.	Parent=comp121659_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111891998	111892078	.	+	0	Parent=comp121659_c0_seq1.mrna1
Chr2	gffcl	locus	111892772	111893376	.	+	.	ID=RLOC_00020652;geneIDs=comp117900_c0_seq1.path1;transcripts=comp117900_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111892772	111893376	.	+	.	ID=comp117900_c0_seq1.mrna1;geneID=comp117900_c0_seq1.path1;Name=comp117900_c0_seq1;Dir=indeterminatecoverage=98.4;identity=100.0;matches=605;mismatches=0;indels=0;unknowns=0;Target=comp117900_c0_seq1 615 11 .;CDS_Target=comp117900_c0_seq1 478 344 .;locus=RLOC_00020652
Chr2	stalkie_big_nohaplotig	exon	111892772	111893376	100	+	.	Parent=comp117900_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111893105	111893239	.	+	0	Parent=comp117900_c0_seq1.mrna1
Chr2	gffcl	locus	111901951	111902476	.	-	.	ID=RLOC_00020653;geneIDs=comp154367_c3_seq1.path1;transcripts=comp154367_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111901951	111902476	.	-	.	ID=comp154367_c3_seq1.mrna1;geneID=comp154367_c3_seq1.path1;Name=comp154367_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=522;mismatches=4;indels=0;unknowns=0;Target=comp154367_c3_seq1 526 1 .;CDS_Target=comp154367_c3_seq1 316 197 .;locus=RLOC_00020653
Chr2	stalkie_big_nohaplotig	exon	111901951	111902476	99	-	.	Parent=comp154367_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111902161	111902280	.	-	0	Parent=comp154367_c3_seq1.mrna1
Chr2	gffcl	locus	111913079	111917305	.	+	.	ID=RLOC_00020654;geneIDs=FBgn0038110.1.path1;transcripts=FBgn0038110.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111913079	111917305	.	+	.	ID=FBgn0038110.1.mrna1;geneID=FBgn0038110.1.path1;Name=FBgn0038110.1;Dir=sensecoverage=100.0;identity=100.0;matches=888;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020654
Chr2	stalkie_big_nohaplotig	exon	111913079	111913133	100	+	.	Parent=FBgn0038110.1.mrna1;Target=FBgn0038110.1 1 55 +
Chr2	stalkie_big_nohaplotig	exon	111914157	111914238	100	+	.	Parent=FBgn0038110.1.mrna1;Target=FBgn0038110.1 56 137 +
Chr2	stalkie_big_nohaplotig	exon	111914291	111914359	100	+	.	Parent=FBgn0038110.1.mrna1;Target=FBgn0038110.1 138 206 +
Chr2	stalkie_big_nohaplotig	exon	111914420	111914532	100	+	.	Parent=FBgn0038110.1.mrna1;Target=FBgn0038110.1 207 319 +
Chr2	stalkie_big_nohaplotig	exon	111916615	111916726	100	+	.	Parent=FBgn0038110.1.mrna1;Target=FBgn0038110.1 320 431 +
Chr2	stalkie_big_nohaplotig	exon	111916783	111917002	100	+	.	Parent=FBgn0038110.1.mrna1;Target=FBgn0038110.1 432 651 +
Chr2	stalkie_big_nohaplotig	exon	111917069	111917305	100	+	.	Parent=FBgn0038110.1.mrna1;Target=FBgn0038110.1 652 888 +
Chr2	stalkie_big_nohaplotig	CDS	111913079	111913133	.	+	0	Parent=FBgn0038110.1.mrna1;Target=FBgn0038110.1 1 55 +
Chr2	stalkie_big_nohaplotig	CDS	111914157	111914238	.	+	2	Parent=FBgn0038110.1.mrna1;Target=FBgn0038110.1 56 137 +
Chr2	stalkie_big_nohaplotig	CDS	111914291	111914359	.	+	1	Parent=FBgn0038110.1.mrna1;Target=FBgn0038110.1 138 206 +
Chr2	stalkie_big_nohaplotig	CDS	111914420	111914532	.	+	1	Parent=FBgn0038110.1.mrna1;Target=FBgn0038110.1 207 319 +
Chr2	stalkie_big_nohaplotig	CDS	111916615	111916726	.	+	2	Parent=FBgn0038110.1.mrna1;Target=FBgn0038110.1 320 431 +
Chr2	stalkie_big_nohaplotig	CDS	111916783	111917002	.	+	1	Parent=FBgn0038110.1.mrna1;Target=FBgn0038110.1 432 651 +
Chr2	stalkie_big_nohaplotig	CDS	111917069	111917305	.	+	0	Parent=FBgn0038110.1.mrna1;Target=FBgn0038110.1 652 888 +
Chr2	gffcl	locus	111921246	111941540	.	+	.	ID=RLOC_00020655;geneIDs=FBgn0053100.1.path1;transcripts=FBgn0053100.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111921246	111941540	.	+	.	ID=FBgn0053100.1.mrna1;geneID=FBgn0053100.1.path1;Name=FBgn0053100.1;Dir=sensecoverage=100.0;identity=100.0;matches=660;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020655
Chr2	stalkie_big_nohaplotig	exon	111921246	111921280	100	+	.	Parent=FBgn0053100.1.mrna1;Target=FBgn0053100.1 1 35 +
Chr2	stalkie_big_nohaplotig	exon	111921469	111921925	100	+	.	Parent=FBgn0053100.1.mrna1;Target=FBgn0053100.1 36 492 +
Chr2	stalkie_big_nohaplotig	exon	111941223	111941371	100	+	.	Parent=FBgn0053100.1.mrna1;Target=FBgn0053100.1 493 641 +
Chr2	stalkie_big_nohaplotig	exon	111941522	111941540	100	+	.	Parent=FBgn0053100.1.mrna1;Target=FBgn0053100.1 642 660 +
Chr2	stalkie_big_nohaplotig	CDS	111921246	111921280	.	+	0	Parent=FBgn0053100.1.mrna1;Target=FBgn0053100.1 1 35 +
Chr2	stalkie_big_nohaplotig	CDS	111921469	111921925	.	+	1	Parent=FBgn0053100.1.mrna1;Target=FBgn0053100.1 36 492 +
Chr2	stalkie_big_nohaplotig	CDS	111941223	111941371	.	+	0	Parent=FBgn0053100.1.mrna1;Target=FBgn0053100.1 493 641 +
Chr2	stalkie_big_nohaplotig	CDS	111941522	111941540	.	+	1	Parent=FBgn0053100.1.mrna1;Target=FBgn0053100.1 642 660 +
Chr2	gffcl	locus	111922689	111923286	.	-	.	ID=RLOC_00020656;geneIDs=comp152308_c1_seq1.path1;transcripts=comp152308_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111922689	111923286	.	-	.	ID=comp152308_c1_seq1.mrna1;geneID=comp152308_c1_seq1.path1;Name=comp152308_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=597;mismatches=1;indels=0;unknowns=0;Target=comp152308_c1_seq1 598 1 .;CDS_Target=comp152308_c1_seq1 186 82 .;locus=RLOC_00020656
Chr2	stalkie_big_nohaplotig	exon	111922689	111923286	99	-	.	Parent=comp152308_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111923101	111923205	.	-	0	Parent=comp152308_c1_seq1.mrna1
Chr2	gffcl	locus	111940342	111941065	.	-	.	ID=RLOC_00020658;geneIDs=comp134632_c0_seq1.path1;transcripts=comp134632_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111940342	111941065	.	-	.	ID=comp134632_c0_seq1.mrna1;geneID=comp134632_c0_seq1.path1;Name=comp134632_c0_seq1;Dir=indeterminatecoverage=91.0;identity=100.0;matches=724;mismatches=0;indels=0;unknowns=0;Target=comp134632_c0_seq1 765 42 .;CDS_Target=comp134632_c0_seq1 153 43 .;locus=RLOC_00020658
Chr2	stalkie_big_nohaplotig	exon	111940342	111941065	100	-	.	Parent=comp134632_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111940954	111941064	.	-	0	Parent=comp134632_c0_seq1.mrna1
Chr2	gffcl	locus	111956020	111956631	.	+	.	ID=RLOC_00020660;geneIDs=comp142486_c0_seq1.path1;transcripts=comp142486_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111956020	111956631	.	+	.	ID=comp142486_c0_seq1.mrna1;geneID=comp142486_c0_seq1.path1;Name=comp142486_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=612;mismatches=0;indels=0;unknowns=0;Target=comp142486_c0_seq1 612 1 .;CDS_Target=comp142486_c0_seq1 223 176 .;locus=RLOC_00020660
Chr2	stalkie_big_nohaplotig	exon	111956020	111956631	100	+	.	Parent=comp142486_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111956195	111956242	.	+	0	Parent=comp142486_c0_seq1.mrna1
Chr2	gffcl	locus	111959342	111961309	.	+	.	ID=RLOC_00020661;geneIDs=comp153527_c1_seq1.path1;transcripts=comp153527_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111959342	111961309	.	+	.	ID=comp153527_c1_seq1.mrna1;geneID=comp153527_c1_seq1.path1;Name=comp153527_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1966;mismatches=2;indels=0;unknowns=0;Target=comp153527_c1_seq1 1968 1 .;CDS_Target=comp153527_c1_seq1 667 440 .;locus=RLOC_00020661
Chr2	stalkie_big_nohaplotig	exon	111959342	111961309	99	+	.	Parent=comp153527_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	111959781	111960008	.	+	0	Parent=comp153527_c1_seq1.mrna1
Chr2	gffcl	locus	111967322	111977145	.	+	.	ID=RLOC_00020662;geneIDs=FBgn0058045.1.path1;transcripts=FBgn0058045.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111967322	111977145	.	+	.	ID=FBgn0058045.1.mrna1;geneID=FBgn0058045.1.path1;Name=FBgn0058045.1;Dir=sensecoverage=100.0;identity=100.0;matches=543;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020662
Chr2	stalkie_big_nohaplotig	exon	111967322	111967406	100	+	.	Parent=FBgn0058045.1.mrna1;Target=FBgn0058045.1 1 85 +
Chr2	stalkie_big_nohaplotig	exon	111970917	111971019	100	+	.	Parent=FBgn0058045.1.mrna1;Target=FBgn0058045.1 86 188 +
Chr2	stalkie_big_nohaplotig	exon	111976791	111977145	100	+	.	Parent=FBgn0058045.1.mrna1;Target=FBgn0058045.1 189 543 +
Chr2	stalkie_big_nohaplotig	CDS	111967322	111967406	.	+	0	Parent=FBgn0058045.1.mrna1;Target=FBgn0058045.1 1 85 +
Chr2	stalkie_big_nohaplotig	CDS	111970917	111971019	.	+	2	Parent=FBgn0058045.1.mrna1;Target=FBgn0058045.1 86 188 +
Chr2	stalkie_big_nohaplotig	CDS	111976791	111977145	.	+	1	Parent=FBgn0058045.1.mrna1;Target=FBgn0058045.1 189 543 +
Chr2	gffcl	locus	111987246	111991153	.	-	.	ID=RLOC_00020663;geneIDs=FBgn0010247.1.path1;transcripts=FBgn0010247.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	111987246	111991153	.	-	.	ID=FBgn0010247.1.mrna1;geneID=FBgn0010247.1.path1;Name=FBgn0010247.1;Dir=sensecoverage=100.0;identity=99.9;matches=2634;mismatches=2;indels=1;unknowns=0;Target=FBgn0010247.1 3 74 +;locus=RLOC_00020663
Chr2	stalkie_big_nohaplotig	exon	111987246	111988379	99	-	.	Parent=FBgn0010247.1.mrna1;Target=FBgn0010247.1 1504 2637 +
Chr2	stalkie_big_nohaplotig	exon	111988534	111988690	100	-	.	Parent=FBgn0010247.1.mrna1;Target=FBgn0010247.1 1347 1503 +
Chr2	stalkie_big_nohaplotig	exon	111988756	111989313	100	-	.	Parent=FBgn0010247.1.mrna1;Target=FBgn0010247.1 789 1346 +
Chr2	stalkie_big_nohaplotig	exon	111989376	111989912	99	-	.	Parent=FBgn0010247.1.mrna1;Target=FBgn0010247.1 252 788 +
Chr2	stalkie_big_nohaplotig	exon	111990904	111991153	99	-	.	Parent=FBgn0010247.1.mrna1;Target=FBgn0010247.1 1 251 +
Chr2	stalkie_big_nohaplotig	CDS	111991081	111991151	.	-	0	Parent=FBgn0010247.1.mrna1
Chr2	gffcl	locus	112012468	112014552	.	+	.	ID=RLOC_00020665;geneIDs=comp160815_c2_seq1.path2;transcripts=comp160815_c2_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	112012468	112014552	.	+	.	ID=comp160815_c2_seq1.mrna2;geneID=comp160815_c2_seq1.path2;Name=comp160815_c2_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=2045;mismatches=39;indels=9;unknowns=0;Target=comp160815_c2_seq1 2093 2 .;CDS_Target=comp160815_c2_seq1 1001 795 .;locus=RLOC_00020665
Chr2	stalkie_big_nohaplotig	exon	112012468	112014552	97	+	.	Parent=comp160815_c2_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	112013262	112013468	.	+	0	Parent=comp160815_c2_seq1.mrna2
Chr2	gffcl	locus	112032684	112035396	.	+	.	ID=RLOC_00020666;geneIDs=FBgn0054031.1.path1;transcripts=FBgn0054031.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112032684	112035396	.	+	.	ID=FBgn0054031.1.mrna1;geneID=FBgn0054031.1.path1;Name=FBgn0054031.1;Dir=sensecoverage=100.0;identity=100.0;matches=819;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020666
Chr2	stalkie_big_nohaplotig	exon	112032684	112032870	100	+	.	Parent=FBgn0054031.1.mrna1;Target=FBgn0054031.1 1 187 +
Chr2	stalkie_big_nohaplotig	exon	112034706	112034909	100	+	.	Parent=FBgn0054031.1.mrna1;Target=FBgn0054031.1 188 391 +
Chr2	stalkie_big_nohaplotig	exon	112034969	112035396	100	+	.	Parent=FBgn0054031.1.mrna1;Target=FBgn0054031.1 392 819 +
Chr2	stalkie_big_nohaplotig	CDS	112032684	112032870	.	+	0	Parent=FBgn0054031.1.mrna1;Target=FBgn0054031.1 1 187 +
Chr2	stalkie_big_nohaplotig	CDS	112034706	112034909	.	+	2	Parent=FBgn0054031.1.mrna1;Target=FBgn0054031.1 188 391 +
Chr2	stalkie_big_nohaplotig	CDS	112034969	112035396	.	+	2	Parent=FBgn0054031.1.mrna1;Target=FBgn0054031.1 392 819 +
Chr2	gffcl	locus	112043304	112046036	.	+	.	ID=RLOC_00020667;geneIDs=FBgn0052350.1.path1;transcripts=FBgn0052350.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112043304	112046036	.	+	.	ID=FBgn0052350.1.mrna1;geneID=FBgn0052350.1.path1;Name=FBgn0052350.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2732;mismatches=1;indels=3;unknowns=0;Target=FBgn0052350.1 2736 1 .;locus=RLOC_00020667
Chr2	stalkie_big_nohaplotig	exon	112043304	112046036	99	+	.	Parent=FBgn0052350.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112043304	112046036	.	+	0	Parent=FBgn0052350.1.mrna1
Chr2	gffcl	locus	112051328	112067639	.	-	.	ID=RLOC_00020668;geneIDs=FBgn0037736.1.path1,comp157879_c0_seq1.path1;transcripts=comp157879_c0_seq1.mrna1,FBgn0037736.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112051328	112067639	.	-	.	ID=comp157879_c0_seq1.mrna1;geneID=comp157879_c0_seq1.path1;Name=comp157879_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=3721;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020668
Chr2	stalkie_big_nohaplotig	exon	112051328	112052368	100	-	.	Parent=comp157879_c0_seq1.mrna1;Target=comp157879_c0_seq1 2681 3721 +
Chr2	stalkie_big_nohaplotig	exon	112053753	112053927	100	-	.	Parent=comp157879_c0_seq1.mrna1;Target=comp157879_c0_seq1 2506 2680 +
Chr2	stalkie_big_nohaplotig	exon	112054537	112054670	100	-	.	Parent=comp157879_c0_seq1.mrna1;Target=comp157879_c0_seq1 2372 2505 +
Chr2	stalkie_big_nohaplotig	exon	112055610	112055732	100	-	.	Parent=comp157879_c0_seq1.mrna1;Target=comp157879_c0_seq1 2249 2371 +
Chr2	stalkie_big_nohaplotig	exon	112057520	112057690	100	-	.	Parent=comp157879_c0_seq1.mrna1;Target=comp157879_c0_seq1 2078 2248 +
Chr2	stalkie_big_nohaplotig	exon	112057773	112057932	100	-	.	Parent=comp157879_c0_seq1.mrna1;Target=comp157879_c0_seq1 1918 2077 +
Chr2	stalkie_big_nohaplotig	exon	112058892	112059022	100	-	.	Parent=comp157879_c0_seq1.mrna1;Target=comp157879_c0_seq1 1787 1917 +
Chr2	stalkie_big_nohaplotig	exon	112059178	112060016	100	-	.	Parent=comp157879_c0_seq1.mrna1;Target=comp157879_c0_seq1 948 1786 +
Chr2	stalkie_big_nohaplotig	exon	112060903	112061109	100	-	.	Parent=comp157879_c0_seq1.mrna1;Target=comp157879_c0_seq1 741 947 +
Chr2	stalkie_big_nohaplotig	exon	112063409	112063519	100	-	.	Parent=comp157879_c0_seq1.mrna1;Target=comp157879_c0_seq1 630 740 +
Chr2	stalkie_big_nohaplotig	exon	112064280	112064482	100	-	.	Parent=comp157879_c0_seq1.mrna1;Target=comp157879_c0_seq1 427 629 +
Chr2	stalkie_big_nohaplotig	exon	112065059	112065182	100	-	.	Parent=comp157879_c0_seq1.mrna1;Target=comp157879_c0_seq1 303 426 +
Chr2	stalkie_big_nohaplotig	exon	112067338	112067639	100	-	.	Parent=comp157879_c0_seq1.mrna1;Target=comp157879_c0_seq1 1 302 +
Chr2	stalkie_big_nohaplotig	CDS	112052067	112052368	.	-	2	Parent=comp157879_c0_seq1.mrna1;Target=comp157879_c0_seq1 2681 2982 +
Chr2	stalkie_big_nohaplotig	CDS	112053753	112053927	.	-	0	Parent=comp157879_c0_seq1.mrna1;Target=comp157879_c0_seq1 2506 2680 +
Chr2	stalkie_big_nohaplotig	CDS	112054537	112054670	.	-	2	Parent=comp157879_c0_seq1.mrna1;Target=comp157879_c0_seq1 2372 2505 +
Chr2	stalkie_big_nohaplotig	CDS	112055610	112055732	.	-	2	Parent=comp157879_c0_seq1.mrna1;Target=comp157879_c0_seq1 2249 2371 +
Chr2	stalkie_big_nohaplotig	CDS	112057520	112057690	.	-	2	Parent=comp157879_c0_seq1.mrna1;Target=comp157879_c0_seq1 2078 2248 +
Chr2	stalkie_big_nohaplotig	CDS	112057773	112057932	.	-	0	Parent=comp157879_c0_seq1.mrna1;Target=comp157879_c0_seq1 1918 2077 +
Chr2	stalkie_big_nohaplotig	CDS	112058892	112058939	.	-	0	Parent=comp157879_c0_seq1.mrna1;Target=comp157879_c0_seq1 1870 1917 +
Chr2	stalkie_big_nohaplotig	mRNA	112051457	112067416	.	-	.	ID=FBgn0037736.1.mrna1;geneID=FBgn0037736.1.path1;Name=FBgn0037736.1;Dir=sensecoverage=100.0;identity=100.0;matches=2577;mismatches=0;indels=0;unknowns=12;locus=RLOC_00020668
Chr2	stalkie_big_nohaplotig	exon	112051457	112051849	100	-	.	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 2197 2589 +
Chr2	stalkie_big_nohaplotig	exon	112052088	112052368	100	-	.	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 1916 2196 +
Chr2	stalkie_big_nohaplotig	exon	112053753	112053927	100	-	.	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 1741 1915 +
Chr2	stalkie_big_nohaplotig	exon	112054537	112054670	100	-	.	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 1607 1740 +
Chr2	stalkie_big_nohaplotig	exon	112055610	112055732	100	-	.	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 1484 1606 +
Chr2	stalkie_big_nohaplotig	exon	112057520	112057690	100	-	.	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 1313 1483 +
Chr2	stalkie_big_nohaplotig	exon	112057773	112057932	100	-	.	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 1153 1312 +
Chr2	stalkie_big_nohaplotig	exon	112058892	112059022	100	-	.	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 1022 1152 +
Chr2	stalkie_big_nohaplotig	exon	112059178	112059322	100	-	.	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 877 1021 +
Chr2	stalkie_big_nohaplotig	exon	112059865	112060016	100	-	.	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 725 876 +
Chr2	stalkie_big_nohaplotig	exon	112060903	112061109	100	-	.	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 518 724 +
Chr2	stalkie_big_nohaplotig	exon	112063409	112063519	100	-	.	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 407 517 +
Chr2	stalkie_big_nohaplotig	exon	112064280	112064482	100	-	.	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 204 406 +
Chr2	stalkie_big_nohaplotig	exon	112065059	112065182	100	-	.	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 80 203 +
Chr2	stalkie_big_nohaplotig	exon	112067338	112067416	100	-	.	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	112051457	112051849	.	-	0	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 2197 2589 +
Chr2	stalkie_big_nohaplotig	CDS	112052088	112052368	.	-	2	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 1916 2196 +
Chr2	stalkie_big_nohaplotig	CDS	112053753	112053927	.	-	0	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 1741 1915 +
Chr2	stalkie_big_nohaplotig	CDS	112054537	112054670	.	-	2	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 1607 1740 +
Chr2	stalkie_big_nohaplotig	CDS	112055610	112055732	.	-	2	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 1484 1606 +
Chr2	stalkie_big_nohaplotig	CDS	112057520	112057690	.	-	2	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 1313 1483 +
Chr2	stalkie_big_nohaplotig	CDS	112057773	112057932	.	-	0	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 1153 1312 +
Chr2	stalkie_big_nohaplotig	CDS	112058892	112059022	.	-	2	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 1022 1152 +
Chr2	stalkie_big_nohaplotig	CDS	112059178	112059322	.	-	0	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 877 1021 +
Chr2	stalkie_big_nohaplotig	CDS	112059865	112060016	.	-	2	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 725 876 +
Chr2	stalkie_big_nohaplotig	CDS	112060903	112061109	.	-	2	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 518 724 +
Chr2	stalkie_big_nohaplotig	CDS	112063409	112063519	.	-	2	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 407 517 +
Chr2	stalkie_big_nohaplotig	CDS	112064280	112064482	.	-	1	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 204 406 +
Chr2	stalkie_big_nohaplotig	CDS	112065059	112065182	.	-	2	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 80 203 +
Chr2	stalkie_big_nohaplotig	CDS	112067338	112067416	.	-	0	Parent=FBgn0037736.1.mrna1;Target=FBgn0037736.1 1 79 +
Chr2	gffcl	locus	112072833	112086929	.	-	.	ID=RLOC_00020669;geneIDs=FBgn0260987.1.path1;transcripts=FBgn0260987.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112072833	112086929	.	-	.	ID=FBgn0260987.1.mrna1;geneID=FBgn0260987.1.path1;Name=FBgn0260987.1;Dir=sensecoverage=100.0;identity=100.0;matches=2181;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020669
Chr2	stalkie_big_nohaplotig	exon	112072833	112072955	100	-	.	Parent=FBgn0260987.1.mrna1;Target=FBgn0260987.1 2059 2181 +
Chr2	stalkie_big_nohaplotig	exon	112073225	112073386	100	-	.	Parent=FBgn0260987.1.mrna1;Target=FBgn0260987.1 1897 2058 +
Chr2	stalkie_big_nohaplotig	exon	112073673	112074420	100	-	.	Parent=FBgn0260987.1.mrna1;Target=FBgn0260987.1 1149 1896 +
Chr2	stalkie_big_nohaplotig	exon	112074477	112074747	100	-	.	Parent=FBgn0260987.1.mrna1;Target=FBgn0260987.1 878 1148 +
Chr2	stalkie_big_nohaplotig	exon	112074805	112074987	100	-	.	Parent=FBgn0260987.1.mrna1;Target=FBgn0260987.1 695 877 +
Chr2	stalkie_big_nohaplotig	exon	112075946	112076066	100	-	.	Parent=FBgn0260987.1.mrna1;Target=FBgn0260987.1 574 694 +
Chr2	stalkie_big_nohaplotig	exon	112083612	112083902	100	-	.	Parent=FBgn0260987.1.mrna1;Target=FBgn0260987.1 283 573 +
Chr2	stalkie_big_nohaplotig	exon	112086648	112086929	100	-	.	Parent=FBgn0260987.1.mrna1;Target=FBgn0260987.1 1 282 +
Chr2	stalkie_big_nohaplotig	CDS	112072833	112072955	.	-	0	Parent=FBgn0260987.1.mrna1;Target=FBgn0260987.1 2059 2181 +
Chr2	stalkie_big_nohaplotig	CDS	112073225	112073386	.	-	0	Parent=FBgn0260987.1.mrna1;Target=FBgn0260987.1 1897 2058 +
Chr2	stalkie_big_nohaplotig	CDS	112073673	112074420	.	-	1	Parent=FBgn0260987.1.mrna1;Target=FBgn0260987.1 1149 1896 +
Chr2	stalkie_big_nohaplotig	CDS	112074477	112074747	.	-	2	Parent=FBgn0260987.1.mrna1;Target=FBgn0260987.1 878 1148 +
Chr2	stalkie_big_nohaplotig	CDS	112074805	112074987	.	-	2	Parent=FBgn0260987.1.mrna1;Target=FBgn0260987.1 695 877 +
Chr2	stalkie_big_nohaplotig	CDS	112075946	112076066	.	-	0	Parent=FBgn0260987.1.mrna1;Target=FBgn0260987.1 574 694 +
Chr2	stalkie_big_nohaplotig	CDS	112083612	112083902	.	-	0	Parent=FBgn0260987.1.mrna1;Target=FBgn0260987.1 283 573 +
Chr2	stalkie_big_nohaplotig	CDS	112086648	112086929	.	-	0	Parent=FBgn0260987.1.mrna1;Target=FBgn0260987.1 1 282 +
Chr2	gffcl	locus	112098628	112099118	.	+	.	ID=RLOC_00020670;geneIDs=FBgn0040020.1.path1;transcripts=FBgn0040020.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112098628	112099118	.	+	.	ID=FBgn0040020.1.mrna1;geneID=FBgn0040020.1.path1;Name=FBgn0040020.1;Dir=sensecoverage=100.0;identity=100.0;matches=432;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020670
Chr2	stalkie_big_nohaplotig	exon	112098628	112098678	100	+	.	Parent=FBgn0040020.1.mrna1;Target=FBgn0040020.1 1 51 +
Chr2	stalkie_big_nohaplotig	exon	112098738	112099118	100	+	.	Parent=FBgn0040020.1.mrna1;Target=FBgn0040020.1 52 432 +
Chr2	stalkie_big_nohaplotig	CDS	112098628	112098678	.	+	0	Parent=FBgn0040020.1.mrna1;Target=FBgn0040020.1 1 51 +
Chr2	stalkie_big_nohaplotig	CDS	112098738	112099118	.	+	0	Parent=FBgn0040020.1.mrna1;Target=FBgn0040020.1 52 432 +
Chr2	gffcl	locus	112105079	112111032	.	-	.	ID=RLOC_00020671;geneIDs=FBgn0040022.1.path1;transcripts=FBgn0040022.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112105079	112111032	.	-	.	ID=FBgn0040022.1.mrna1;geneID=FBgn0040022.1.path1;Name=FBgn0040022.1;Dir=sensecoverage=100.0;identity=99.9;matches=4962;mismatches=6;indels=0;unknowns=0;locus=RLOC_00020671
Chr2	stalkie_big_nohaplotig	exon	112105079	112105249	100	-	.	Parent=FBgn0040022.1.mrna1;Target=FBgn0040022.1 4798 4968 +
Chr2	stalkie_big_nohaplotig	exon	112105310	112105934	99	-	.	Parent=FBgn0040022.1.mrna1;Target=FBgn0040022.1 4173 4797 +
Chr2	stalkie_big_nohaplotig	exon	112106717	112110363	99	-	.	Parent=FBgn0040022.1.mrna1;Target=FBgn0040022.1 526 4172 +
Chr2	stalkie_big_nohaplotig	exon	112110461	112110710	100	-	.	Parent=FBgn0040022.1.mrna1;Target=FBgn0040022.1 276 525 +
Chr2	stalkie_big_nohaplotig	exon	112110758	112111032	99	-	.	Parent=FBgn0040022.1.mrna1;Target=FBgn0040022.1 1 275 +
Chr2	stalkie_big_nohaplotig	CDS	112105079	112105249	.	-	0	Parent=FBgn0040022.1.mrna1;Target=FBgn0040022.1 4798 4968 +
Chr2	stalkie_big_nohaplotig	CDS	112105310	112105934	.	-	1	Parent=FBgn0040022.1.mrna1;Target=FBgn0040022.1 4173 4797 +
Chr2	stalkie_big_nohaplotig	CDS	112106717	112110363	.	-	0	Parent=FBgn0040022.1.mrna1;Target=FBgn0040022.1 526 4172 +
Chr2	stalkie_big_nohaplotig	CDS	112110461	112110710	.	-	1	Parent=FBgn0040022.1.mrna1;Target=FBgn0040022.1 276 525 +
Chr2	stalkie_big_nohaplotig	CDS	112110758	112111032	.	-	0	Parent=FBgn0040022.1.mrna1;Target=FBgn0040022.1 1 275 +
Chr2	gffcl	locus	112126795	112128194	.	+	.	ID=RLOC_00020672;geneIDs=FBgn0044510.1.path1;transcripts=FBgn0044510.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112126795	112128194	.	+	.	ID=FBgn0044510.1.mrna1;geneID=FBgn0044510.1.path1;Name=FBgn0044510.1;Dir=sensecoverage=100.0;identity=100.0;matches=1347;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020672
Chr2	stalkie_big_nohaplotig	exon	112126795	112126981	100	+	.	Parent=FBgn0044510.1.mrna1;Target=FBgn0044510.1 1 187 +
Chr2	stalkie_big_nohaplotig	exon	112127035	112128194	100	+	.	Parent=FBgn0044510.1.mrna1;Target=FBgn0044510.1 188 1347 +
Chr2	stalkie_big_nohaplotig	CDS	112126795	112126981	.	+	0	Parent=FBgn0044510.1.mrna1;Target=FBgn0044510.1 1 187 +
Chr2	stalkie_big_nohaplotig	CDS	112127035	112128194	.	+	2	Parent=FBgn0044510.1.mrna1;Target=FBgn0044510.1 188 1347 +
Chr2	gffcl	locus	112148962	112150101	.	+	.	ID=RLOC_00020674;geneIDs=FBgn0058298.1.path1;transcripts=FBgn0058298.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112148962	112150101	.	+	.	ID=FBgn0058298.1.mrna1;geneID=FBgn0058298.1.path1;Name=FBgn0058298.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1140;mismatches=0;indels=0;unknowns=0;Target=FBgn0058298.1 1140 1 .;locus=RLOC_00020674
Chr2	stalkie_big_nohaplotig	exon	112148962	112150101	100	+	.	Parent=FBgn0058298.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112148962	112150101	.	+	0	Parent=FBgn0058298.1.mrna1
Chr2	gffcl	locus	112157129	112161768	.	+	.	ID=RLOC_00020675;geneIDs=FBgn0020660.1.path1;transcripts=FBgn0020660.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112157129	112161768	.	+	.	ID=FBgn0020660.1.mrna1;geneID=FBgn0020660.1.path1;Name=FBgn0020660.1;Dir=sensecoverage=100.0;identity=100.0;matches=1449;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020675
Chr2	stalkie_big_nohaplotig	exon	112157129	112157219	100	+	.	Parent=FBgn0020660.1.mrna1;Target=FBgn0020660.1 1 91 +
Chr2	stalkie_big_nohaplotig	exon	112157805	112158926	100	+	.	Parent=FBgn0020660.1.mrna1;Target=FBgn0020660.1 92 1213 +
Chr2	stalkie_big_nohaplotig	exon	112158979	112159039	100	+	.	Parent=FBgn0020660.1.mrna1;Target=FBgn0020660.1 1214 1274 +
Chr2	stalkie_big_nohaplotig	exon	112160008	112160128	100	+	.	Parent=FBgn0020660.1.mrna1;Target=FBgn0020660.1 1275 1395 +
Chr2	stalkie_big_nohaplotig	exon	112161715	112161768	100	+	.	Parent=FBgn0020660.1.mrna1;Target=FBgn0020660.1 1396 1449 +
Chr2	stalkie_big_nohaplotig	CDS	112157129	112157219	.	+	0	Parent=FBgn0020660.1.mrna1;Target=FBgn0020660.1 1 91 +
Chr2	stalkie_big_nohaplotig	CDS	112157805	112158926	.	+	2	Parent=FBgn0020660.1.mrna1;Target=FBgn0020660.1 92 1213 +
Chr2	stalkie_big_nohaplotig	CDS	112158979	112159039	.	+	2	Parent=FBgn0020660.1.mrna1;Target=FBgn0020660.1 1214 1274 +
Chr2	stalkie_big_nohaplotig	CDS	112160008	112160128	.	+	1	Parent=FBgn0020660.1.mrna1;Target=FBgn0020660.1 1275 1395 +
Chr2	stalkie_big_nohaplotig	CDS	112161715	112161768	.	+	0	Parent=FBgn0020660.1.mrna1;Target=FBgn0020660.1 1396 1449 +
Chr2	gffcl	locus	112172227	112172719	.	+	.	ID=RLOC_00020677;geneIDs=FBgn0032822.2.path1;transcripts=FBgn0032822.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112172227	112172719	.	+	.	ID=FBgn0032822.2.mrna1;geneID=FBgn0032822.2.path1;Name=FBgn0032822.2;Dir=sensecoverage=100.0;identity=99.7;matches=383;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020677
Chr2	stalkie_big_nohaplotig	exon	112172227	112172246	100	+	.	Parent=FBgn0032822.2.mrna1;Target=FBgn0032822.2 1 20 +
Chr2	stalkie_big_nohaplotig	exon	112172303	112172585	99	+	.	Parent=FBgn0032822.2.mrna1;Target=FBgn0032822.2 21 303 +
Chr2	stalkie_big_nohaplotig	exon	112172639	112172719	100	+	.	Parent=FBgn0032822.2.mrna1;Target=FBgn0032822.2 304 384 +
Chr2	stalkie_big_nohaplotig	CDS	112172227	112172246	.	+	0	Parent=FBgn0032822.2.mrna1;Target=FBgn0032822.2 1 20 +
Chr2	stalkie_big_nohaplotig	CDS	112172303	112172585	.	+	1	Parent=FBgn0032822.2.mrna1;Target=FBgn0032822.2 21 303 +
Chr2	stalkie_big_nohaplotig	CDS	112172639	112172719	.	+	0	Parent=FBgn0032822.2.mrna1;Target=FBgn0032822.2 304 384 +
Chr2	gffcl	locus	112173328	112173711	.	+	.	ID=RLOC_00020678;geneIDs=comp85829_c0_seq1.path1;transcripts=comp85829_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112173328	112173711	.	+	.	ID=comp85829_c0_seq1.mrna1;geneID=comp85829_c0_seq1.path1;Name=comp85829_c0_seq1;Dir=indeterminatecoverage=98.0;identity=99.7;matches=383;mismatches=1;indels=0;unknowns=0;Target=comp85829_c0_seq1 392 9 .;CDS_Target=comp85829_c0_seq1 218 102 .;locus=RLOC_00020678
Chr2	stalkie_big_nohaplotig	exon	112173328	112173711	99	+	.	Parent=comp85829_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112173421	112173537	.	+	0	Parent=comp85829_c0_seq1.mrna1
Chr2	gffcl	locus	112178212	112180146	.	+	.	ID=RLOC_00020679;geneIDs=FBgn0038111.1.path1;transcripts=FBgn0038111.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112178212	112180146	.	+	.	ID=FBgn0038111.1.mrna1;geneID=FBgn0038111.1.path1;Name=FBgn0038111.1;Dir=sensecoverage=99.9;identity=100.0;matches=1586;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020679
Chr2	stalkie_big_nohaplotig	exon	112178212	112178373	100	+	.	Parent=FBgn0038111.1.mrna1;Target=FBgn0038111.1 2 163 +
Chr2	stalkie_big_nohaplotig	exon	112178601	112179238	100	+	.	Parent=FBgn0038111.1.mrna1;Target=FBgn0038111.1 164 801 +
Chr2	stalkie_big_nohaplotig	exon	112179305	112179424	100	+	.	Parent=FBgn0038111.1.mrna1;Target=FBgn0038111.1 802 921 +
Chr2	stalkie_big_nohaplotig	exon	112179481	112180146	100	+	.	Parent=FBgn0038111.1.mrna1;Target=FBgn0038111.1 922 1587 +
Chr2	stalkie_big_nohaplotig	CDS	112178214	112178373	.	+	0	Parent=FBgn0038111.1.mrna1;Target=FBgn0038111.1 4 163 +
Chr2	stalkie_big_nohaplotig	CDS	112178601	112179238	.	+	2	Parent=FBgn0038111.1.mrna1;Target=FBgn0038111.1 164 801 +
Chr2	stalkie_big_nohaplotig	CDS	112179305	112179424	.	+	0	Parent=FBgn0038111.1.mrna1;Target=FBgn0038111.1 802 921 +
Chr2	stalkie_big_nohaplotig	CDS	112179481	112180146	.	+	0	Parent=FBgn0038111.1.mrna1;Target=FBgn0038111.1 922 1587 +
Chr2	gffcl	locus	112182558	112196209	.	-	.	ID=RLOC_00020680;geneIDs=FBgn0044452.1.path1;transcripts=FBgn0044452.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112182558	112196209	.	-	.	ID=FBgn0044452.1.mrna1;geneID=FBgn0044452.1.path1;Name=FBgn0044452.1;Dir=sensecoverage=100.0;identity=99.9;matches=5970;mismatches=3;indels=0;unknowns=0;locus=RLOC_00020680
Chr2	stalkie_big_nohaplotig	exon	112182558	112182785	100	-	.	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 5746 5973 +
Chr2	stalkie_big_nohaplotig	exon	112182849	112182992	100	-	.	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 5602 5745 +
Chr2	stalkie_big_nohaplotig	exon	112183062	112183216	100	-	.	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 5447 5601 +
Chr2	stalkie_big_nohaplotig	exon	112183364	112183491	100	-	.	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 5319 5446 +
Chr2	stalkie_big_nohaplotig	exon	112183561	112184427	100	-	.	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 4452 5318 +
Chr2	stalkie_big_nohaplotig	exon	112184590	112184813	100	-	.	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 4228 4451 +
Chr2	stalkie_big_nohaplotig	exon	112185870	112186574	100	-	.	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 3523 4227 +
Chr2	stalkie_big_nohaplotig	exon	112186635	112186767	100	-	.	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 3390 3522 +
Chr2	stalkie_big_nohaplotig	exon	112186824	112186906	100	-	.	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 3307 3389 +
Chr2	stalkie_big_nohaplotig	exon	112187024	112187128	100	-	.	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 3202 3306 +
Chr2	stalkie_big_nohaplotig	exon	112187183	112187364	100	-	.	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 3020 3201 +
Chr2	stalkie_big_nohaplotig	exon	112187427	112187920	100	-	.	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 2526 3019 +
Chr2	stalkie_big_nohaplotig	exon	112188004	112188127	100	-	.	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 2402 2525 +
Chr2	stalkie_big_nohaplotig	exon	112188192	112188364	100	-	.	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 2229 2401 +
Chr2	stalkie_big_nohaplotig	exon	112189355	112189446	100	-	.	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 2137 2228 +
Chr2	stalkie_big_nohaplotig	exon	112190962	112191127	100	-	.	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 1971 2136 +
Chr2	stalkie_big_nohaplotig	exon	112193156	112193448	100	-	.	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 1678 1970 +
Chr2	stalkie_big_nohaplotig	exon	112194274	112195457	99	-	.	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 494 1677 +
Chr2	stalkie_big_nohaplotig	exon	112195510	112195831	100	-	.	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 172 493 +
Chr2	stalkie_big_nohaplotig	exon	112196039	112196209	98	-	.	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 1 171 +
Chr2	stalkie_big_nohaplotig	CDS	112182558	112182785	.	-	0	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 5746 5973 +
Chr2	stalkie_big_nohaplotig	CDS	112182849	112182992	.	-	0	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 5602 5745 +
Chr2	stalkie_big_nohaplotig	CDS	112183062	112183216	.	-	2	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 5447 5601 +
Chr2	stalkie_big_nohaplotig	CDS	112183364	112183491	.	-	1	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 5319 5446 +
Chr2	stalkie_big_nohaplotig	CDS	112183561	112184427	.	-	1	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 4452 5318 +
Chr2	stalkie_big_nohaplotig	CDS	112184590	112184813	.	-	0	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 4228 4451 +
Chr2	stalkie_big_nohaplotig	CDS	112185870	112186574	.	-	0	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 3523 4227 +
Chr2	stalkie_big_nohaplotig	CDS	112186635	112186767	.	-	1	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 3390 3522 +
Chr2	stalkie_big_nohaplotig	CDS	112186824	112186906	.	-	0	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 3307 3389 +
Chr2	stalkie_big_nohaplotig	CDS	112187024	112187128	.	-	0	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 3202 3306 +
Chr2	stalkie_big_nohaplotig	CDS	112187183	112187364	.	-	2	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 3020 3201 +
Chr2	stalkie_big_nohaplotig	CDS	112187427	112187920	.	-	1	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 2526 3019 +
Chr2	stalkie_big_nohaplotig	CDS	112188004	112188127	.	-	2	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 2402 2525 +
Chr2	stalkie_big_nohaplotig	CDS	112188192	112188364	.	-	1	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 2229 2401 +
Chr2	stalkie_big_nohaplotig	CDS	112189355	112189446	.	-	0	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 2137 2228 +
Chr2	stalkie_big_nohaplotig	CDS	112190962	112191127	.	-	1	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 1971 2136 +
Chr2	stalkie_big_nohaplotig	CDS	112193156	112193448	.	-	0	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 1678 1970 +
Chr2	stalkie_big_nohaplotig	CDS	112194274	112195457	.	-	2	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 494 1677 +
Chr2	stalkie_big_nohaplotig	CDS	112195510	112195831	.	-	0	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 172 493 +
Chr2	stalkie_big_nohaplotig	CDS	112196039	112196209	.	-	0	Parent=FBgn0044452.1.mrna1;Target=FBgn0044452.1 1 171 +
Chr2	gffcl	locus	112199128	112199672	.	+	.	ID=RLOC_00020681;geneIDs=FBgn0262512.1.path1;transcripts=FBgn0262512.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112199128	112199672	.	+	.	ID=FBgn0262512.1.mrna1;geneID=FBgn0262512.1.path1;Name=FBgn0262512.1;Dir=sensecoverage=100.0;identity=100.0;matches=390;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020681
Chr2	stalkie_big_nohaplotig	exon	112199128	112199199	100	+	.	Parent=FBgn0262512.1.mrna1;Target=FBgn0262512.1 1 72 +
Chr2	stalkie_big_nohaplotig	exon	112199248	112199329	100	+	.	Parent=FBgn0262512.1.mrna1;Target=FBgn0262512.1 73 154 +
Chr2	stalkie_big_nohaplotig	exon	112199380	112199585	100	+	.	Parent=FBgn0262512.1.mrna1;Target=FBgn0262512.1 155 360 +
Chr2	stalkie_big_nohaplotig	exon	112199643	112199672	100	+	.	Parent=FBgn0262512.1.mrna1;Target=FBgn0262512.1 361 390 +
Chr2	stalkie_big_nohaplotig	CDS	112199128	112199199	.	+	0	Parent=FBgn0262512.1.mrna1;Target=FBgn0262512.1 1 72 +
Chr2	stalkie_big_nohaplotig	CDS	112199248	112199329	.	+	0	Parent=FBgn0262512.1.mrna1;Target=FBgn0262512.1 73 154 +
Chr2	stalkie_big_nohaplotig	CDS	112199380	112199585	.	+	2	Parent=FBgn0262512.1.mrna1;Target=FBgn0262512.1 155 360 +
Chr2	stalkie_big_nohaplotig	CDS	112199643	112199672	.	+	0	Parent=FBgn0262512.1.mrna1;Target=FBgn0262512.1 361 390 +
Chr2	gffcl	locus	112202668	112204269	.	-	.	ID=RLOC_00020682;geneIDs=FBgn0024733.1.path1,comp143749_c0_seq1.path1;transcripts=FBgn0024733.1.mrna1,comp143749_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112202668	112204269	.	-	.	ID=FBgn0024733.1.mrna1;geneID=FBgn0024733.1.path1;Name=FBgn0024733.1;Dir=sensecoverage=100.0;identity=100.0;matches=807;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020682
Chr2	stalkie_big_nohaplotig	exon	112202668	112202829	100	-	.	Parent=FBgn0024733.1.mrna1;Target=FBgn0024733.1 646 807 +
Chr2	stalkie_big_nohaplotig	exon	112203157	112203319	100	-	.	Parent=FBgn0024733.1.mrna1;Target=FBgn0024733.1 483 645 +
Chr2	stalkie_big_nohaplotig	exon	112203611	112203916	100	-	.	Parent=FBgn0024733.1.mrna1;Target=FBgn0024733.1 177 482 +
Chr2	stalkie_big_nohaplotig	exon	112203974	112204002	100	-	.	Parent=FBgn0024733.1.mrna1;Target=FBgn0024733.1 148 176 +
Chr2	stalkie_big_nohaplotig	exon	112204123	112204269	100	-	.	Parent=FBgn0024733.1.mrna1;Target=FBgn0024733.1 1 147 +
Chr2	stalkie_big_nohaplotig	CDS	112202668	112202829	.	-	0	Parent=FBgn0024733.1.mrna1;Target=FBgn0024733.1 646 807 +
Chr2	stalkie_big_nohaplotig	CDS	112203157	112203319	.	-	1	Parent=FBgn0024733.1.mrna1;Target=FBgn0024733.1 483 645 +
Chr2	stalkie_big_nohaplotig	CDS	112203611	112203916	.	-	1	Parent=FBgn0024733.1.mrna1;Target=FBgn0024733.1 177 482 +
Chr2	stalkie_big_nohaplotig	CDS	112203974	112204002	.	-	0	Parent=FBgn0024733.1.mrna1;Target=FBgn0024733.1 148 176 +
Chr2	stalkie_big_nohaplotig	CDS	112204123	112204269	.	-	0	Parent=FBgn0024733.1.mrna1;Target=FBgn0024733.1 1 147 +
Chr2	stalkie_big_nohaplotig	mRNA	112202926	112203178	.	-	.	ID=comp143749_c0_seq1.mrna1;geneID=comp143749_c0_seq1.path1;Name=comp143749_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=253;mismatches=0;indels=0;unknowns=0;Target=comp143749_c0_seq1 253 1 .;CDS_Target=comp143749_c0_seq1 252 151 .;locus=RLOC_00020682
Chr2	stalkie_big_nohaplotig	exon	112202926	112203178	100	-	.	Parent=comp143749_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112202927	112203028	.	-	0	Parent=comp143749_c0_seq1.mrna1
Chr2	gffcl	locus	112211922	112212396	.	+	.	ID=RLOC_00020683;geneIDs=comp122884_c0_seq1.path1;transcripts=comp122884_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112211922	112212396	.	+	.	ID=comp122884_c0_seq1.mrna1;geneID=comp122884_c0_seq1.path1;Name=comp122884_c0_seq1;Dir=indeterminatecoverage=98.1;identity=99.8;matches=474;mismatches=1;indels=0;unknowns=0;Target=comp122884_c0_seq1 475 1 .;CDS_Target=comp122884_c0_seq1 397 143 .;locus=RLOC_00020683
Chr2	stalkie_big_nohaplotig	exon	112211922	112212396	99	+	.	Parent=comp122884_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112212064	112212318	.	+	0	Parent=comp122884_c0_seq1.mrna1
Chr2	gffcl	locus	112216508	112219697	.	+	.	ID=RLOC_00020684;geneIDs=FBgn0005585.1.path1,comp152077_c0_seq1.path1;transcripts=FBgn0005585.1.mrna1,comp152077_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112216508	112219697	.	+	.	ID=FBgn0005585.1.mrna1;geneID=FBgn0005585.1.path1;Name=FBgn0005585.1;Dir=sensecoverage=100.0;identity=100.0;matches=1266;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020684
Chr2	stalkie_big_nohaplotig	exon	112216508	112216643	100	+	.	Parent=FBgn0005585.1.mrna1;Target=FBgn0005585.1 1 136 +
Chr2	stalkie_big_nohaplotig	exon	112216720	112216824	100	+	.	Parent=FBgn0005585.1.mrna1;Target=FBgn0005585.1 137 241 +
Chr2	stalkie_big_nohaplotig	exon	112216979	112217451	100	+	.	Parent=FBgn0005585.1.mrna1;Target=FBgn0005585.1 242 714 +
Chr2	stalkie_big_nohaplotig	exon	112219146	112219697	100	+	.	Parent=FBgn0005585.1.mrna1;Target=FBgn0005585.1 715 1266 +
Chr2	stalkie_big_nohaplotig	CDS	112216508	112216643	.	+	0	Parent=FBgn0005585.1.mrna1;Target=FBgn0005585.1 1 136 +
Chr2	stalkie_big_nohaplotig	CDS	112216720	112216824	.	+	2	Parent=FBgn0005585.1.mrna1;Target=FBgn0005585.1 137 241 +
Chr2	stalkie_big_nohaplotig	CDS	112216979	112217451	.	+	2	Parent=FBgn0005585.1.mrna1;Target=FBgn0005585.1 242 714 +
Chr2	stalkie_big_nohaplotig	CDS	112219146	112219697	.	+	0	Parent=FBgn0005585.1.mrna1;Target=FBgn0005585.1 715 1266 +
Chr2	stalkie_big_nohaplotig	mRNA	112218238	112219145	.	+	.	ID=comp152077_c0_seq1.mrna1;geneID=comp152077_c0_seq1.path1;Name=comp152077_c0_seq1;Dir=indeterminatecoverage=99.3;identity=100.0;matches=908;mismatches=0;indels=0;unknowns=0;Target=comp152077_c0_seq1 914 7 .;CDS_Target=comp152077_c0_seq1 125 9 .;locus=RLOC_00020684
Chr2	stalkie_big_nohaplotig	exon	112218238	112219145	100	+	.	Parent=comp152077_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112218240	112218356	.	+	0	Parent=comp152077_c0_seq1.mrna1
Chr2	gffcl	locus	112221344	112222231	.	-	.	ID=RLOC_00020685;geneIDs=FBgn0039977.1.path1;transcripts=FBgn0039977.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112221344	112222231	.	-	.	ID=FBgn0039977.1.mrna1;geneID=FBgn0039977.1.path1;Name=FBgn0039977.1;Dir=sensecoverage=100.0;identity=100.0;matches=774;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020685
Chr2	stalkie_big_nohaplotig	exon	112221344	112221614	100	-	.	Parent=FBgn0039977.1.mrna1;Target=FBgn0039977.1 504 774 +
Chr2	stalkie_big_nohaplotig	exon	112221674	112222089	100	-	.	Parent=FBgn0039977.1.mrna1;Target=FBgn0039977.1 88 503 +
Chr2	stalkie_big_nohaplotig	exon	112222145	112222231	100	-	.	Parent=FBgn0039977.1.mrna1;Target=FBgn0039977.1 1 87 +
Chr2	stalkie_big_nohaplotig	CDS	112221344	112221614	.	-	1	Parent=FBgn0039977.1.mrna1;Target=FBgn0039977.1 504 774 +
Chr2	stalkie_big_nohaplotig	CDS	112221674	112222089	.	-	0	Parent=FBgn0039977.1.mrna1;Target=FBgn0039977.1 88 503 +
Chr2	stalkie_big_nohaplotig	CDS	112222145	112222231	.	-	0	Parent=FBgn0039977.1.mrna1;Target=FBgn0039977.1 1 87 +
Chr2	gffcl	locus	112229610	112232265	.	-	.	ID=RLOC_00020686;geneIDs=comp158672_c2_seq1.path1,comp164925_c0_seq1.path1;transcripts=comp158672_c2_seq1.mrna1,comp164925_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112229610	112231287	.	-	.	ID=comp158672_c2_seq1.mrna1;geneID=comp158672_c2_seq1.path1;Name=comp158672_c2_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=1597;mismatches=3;indels=0;unknowns=0;Target=comp158672_c2_seq1 285 461 +;locus=RLOC_00020686
Chr2	stalkie_big_nohaplotig	exon	112229610	112231109	99	-	.	Parent=comp158672_c2_seq1.mrna1;Target=comp158672_c2_seq1 101 1600 +
Chr2	stalkie_big_nohaplotig	exon	112231188	112231287	100	-	.	Parent=comp158672_c2_seq1.mrna1;Target=comp158672_c2_seq1 1 100 +
Chr2	stalkie_big_nohaplotig	CDS	112230749	112230925	.	-	0	Parent=comp158672_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112231265	112232265	.	-	.	ID=comp164925_c0_seq1.mrna1;geneID=comp164925_c0_seq1.path1;Name=comp164925_c0_seq1;Dir=sensecoverage=97.5;identity=100.0;matches=621;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020686
Chr2	stalkie_big_nohaplotig	exon	112231265	112231461	100	-	.	Parent=comp164925_c0_seq1.mrna1;Target=comp164925_c0_seq1 425 621 +
Chr2	stalkie_big_nohaplotig	exon	112231792	112231915	100	-	.	Parent=comp164925_c0_seq1.mrna1;Target=comp164925_c0_seq1 301 424 +
Chr2	stalkie_big_nohaplotig	exon	112231966	112232265	100	-	.	Parent=comp164925_c0_seq1.mrna1;Target=comp164925_c0_seq1 1 300 +
Chr2	stalkie_big_nohaplotig	CDS	112231390	112231461	.	-	0	Parent=comp164925_c0_seq1.mrna1;Target=comp164925_c0_seq1 425 496 +
Chr2	stalkie_big_nohaplotig	CDS	112231792	112231915	.	-	1	Parent=comp164925_c0_seq1.mrna1;Target=comp164925_c0_seq1 301 424 +
Chr2	stalkie_big_nohaplotig	CDS	112231966	112232045	.	-	0	Parent=comp164925_c0_seq1.mrna1;Target=comp164925_c0_seq1 221 300 +
Chr2	gffcl	locus	112231439	112242862	.	+	.	ID=RLOC_00020687;geneIDs=comp156571_c0_seq1.path1;transcripts=comp156571_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112231439	112242862	.	+	.	ID=comp156571_c0_seq1.mrna1;geneID=comp156571_c0_seq1.path1;Name=comp156571_c0_seq1;Dir=sensecoverage=100.0;identity=97.8;matches=970;mismatches=6;indels=16;unknowns=0;Target=comp156571_c0_seq1 552 701 +;locus=RLOC_00020687
Chr2	stalkie_big_nohaplotig	exon	112231439	112231463	100	+	.	Parent=comp156571_c0_seq1.mrna1;Target=comp156571_c0_seq1 1 25 +
Chr2	stalkie_big_nohaplotig	exon	112241026	112241216	91	+	.	Parent=comp156571_c0_seq1.mrna1;Target=comp156571_c0_seq1 26 216 +
Chr2	stalkie_big_nohaplotig	exon	112242095	112242862	99	+	.	Parent=comp156571_c0_seq1.mrna1;Target=comp156571_c0_seq1 217 984 +
Chr2	stalkie_big_nohaplotig	CDS	112242430	112242579	.	+	0	Parent=comp156571_c0_seq1.mrna1
Chr2	gffcl	locus	112233894	112234887	.	+	.	ID=RLOC_00020688;geneIDs=comp149802_c1_seq1.path1;transcripts=comp149802_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112233894	112234887	.	+	.	ID=comp149802_c1_seq1.mrna1;geneID=comp149802_c1_seq1.path1;Name=comp149802_c1_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=840;mismatches=2;indels=1;unknowns=0;Target=comp149802_c1_seq1 381 464 +;locus=RLOC_00020688
Chr2	stalkie_big_nohaplotig	exon	112233894	112234024	99	+	.	Parent=comp149802_c1_seq1.mrna1;Target=comp149802_c1_seq1 1 132 +
Chr2	stalkie_big_nohaplotig	exon	112234092	112234114	100	+	.	Parent=comp149802_c1_seq1.mrna1;Target=comp149802_c1_seq1 133 155 +
Chr2	stalkie_big_nohaplotig	exon	112234200	112234887	99	+	.	Parent=comp149802_c1_seq1.mrna1;Target=comp149802_c1_seq1 156 843 +
Chr2	stalkie_big_nohaplotig	CDS	112234425	112234508	.	+	0	Parent=comp149802_c1_seq1.mrna1
Chr2	gffcl	locus	112236719	112237246	.	+	.	ID=RLOC_00020689;geneIDs=comp148816_c1_seq1.path1;transcripts=comp148816_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112236719	112237246	.	+	.	ID=comp148816_c1_seq1.mrna1;geneID=comp148816_c1_seq1.path1;Name=comp148816_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=526;mismatches=2;indels=1;unknowns=0;Target=comp148816_c1_seq1 529 1 .;CDS_Target=comp148816_c1_seq1 93 1 .;locus=RLOC_00020689
Chr2	stalkie_big_nohaplotig	exon	112236719	112237246	99	+	.	Parent=comp148816_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112236719	112236811	.	+	0	Parent=comp148816_c1_seq1.mrna1
Chr2	gffcl	locus	112239068	112240632	.	-	.	ID=RLOC_00020690;geneIDs=FBgn0037737.path1;transcripts=FBgn0037737.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112239068	112240632	.	-	.	ID=FBgn0037737.mrna1;geneID=FBgn0037737.path1;Name=FBgn0037737;Dir=sensecoverage=99.6;identity=100.0;matches=535;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020690
Chr2	stalkie_big_nohaplotig	exon	112239068	112239429	100	-	.	Parent=FBgn0037737.mrna1;Target=FBgn0037737 174 535 +
Chr2	stalkie_big_nohaplotig	exon	112240460	112240632	100	-	.	Parent=FBgn0037737.mrna1;Target=FBgn0037737 1 173 +
Chr2	stalkie_big_nohaplotig	CDS	112239069	112239429	.	-	1	Parent=FBgn0037737.mrna1;Target=FBgn0037737 174 534 +
Chr2	stalkie_big_nohaplotig	CDS	112240460	112240632	.	-	0	Parent=FBgn0037737.mrna1;Target=FBgn0037737 1 173 +
Chr2	gffcl	locus	112251513	112253555	.	+	.	ID=RLOC_00020692;geneIDs=FBgn0264492.1.path1;transcripts=FBgn0264492.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112251513	112253555	.	+	.	ID=FBgn0264492.1.mrna1;geneID=FBgn0264492.1.path1;Name=FBgn0264492.1;Dir=sensecoverage=100.0;identity=100.0;matches=1134;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020692
Chr2	stalkie_big_nohaplotig	exon	112251513	112251631	100	+	.	Parent=FBgn0264492.1.mrna1;Target=FBgn0264492.1 1 119 +
Chr2	stalkie_big_nohaplotig	exon	112252541	112253555	100	+	.	Parent=FBgn0264492.1.mrna1;Target=FBgn0264492.1 120 1134 +
Chr2	stalkie_big_nohaplotig	CDS	112251513	112251631	.	+	0	Parent=FBgn0264492.1.mrna1;Target=FBgn0264492.1 1 119 +
Chr2	stalkie_big_nohaplotig	CDS	112252541	112253555	.	+	1	Parent=FBgn0264492.1.mrna1;Target=FBgn0264492.1 120 1134 +
Chr2	gffcl	locus	112266196	112297605	.	+	.	ID=RLOC_00020693;geneIDs=FBgn0037212.1.path1;transcripts=FBgn0037212.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112266196	112297605	.	+	.	ID=FBgn0037212.1.mrna1;geneID=FBgn0037212.1.path1;Name=FBgn0037212.1;Dir=sensecoverage=100.0;identity=100.0;matches=1719;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020693
Chr2	stalkie_big_nohaplotig	exon	112266196	112266447	100	+	.	Parent=FBgn0037212.1.mrna1;Target=FBgn0037212.1 1 252 +
Chr2	stalkie_big_nohaplotig	exon	112268165	112268209	100	+	.	Parent=FBgn0037212.1.mrna1;Target=FBgn0037212.1 253 297 +
Chr2	stalkie_big_nohaplotig	exon	112268978	112269087	100	+	.	Parent=FBgn0037212.1.mrna1;Target=FBgn0037212.1 298 407 +
Chr2	stalkie_big_nohaplotig	exon	112274893	112275073	100	+	.	Parent=FBgn0037212.1.mrna1;Target=FBgn0037212.1 408 588 +
Chr2	stalkie_big_nohaplotig	exon	112294160	112294275	100	+	.	Parent=FBgn0037212.1.mrna1;Target=FBgn0037212.1 589 704 +
Chr2	stalkie_big_nohaplotig	exon	112294414	112294582	100	+	.	Parent=FBgn0037212.1.mrna1;Target=FBgn0037212.1 705 873 +
Chr2	stalkie_big_nohaplotig	exon	112294640	112294776	100	+	.	Parent=FBgn0037212.1.mrna1;Target=FBgn0037212.1 874 1010 +
Chr2	stalkie_big_nohaplotig	exon	112294839	112294982	100	+	.	Parent=FBgn0037212.1.mrna1;Target=FBgn0037212.1 1011 1154 +
Chr2	stalkie_big_nohaplotig	exon	112296768	112296887	100	+	.	Parent=FBgn0037212.1.mrna1;Target=FBgn0037212.1 1155 1274 +
Chr2	stalkie_big_nohaplotig	exon	112297080	112297329	100	+	.	Parent=FBgn0037212.1.mrna1;Target=FBgn0037212.1 1275 1524 +
Chr2	stalkie_big_nohaplotig	exon	112297411	112297605	100	+	.	Parent=FBgn0037212.1.mrna1;Target=FBgn0037212.1 1525 1719 +
Chr2	stalkie_big_nohaplotig	CDS	112266196	112266447	.	+	0	Parent=FBgn0037212.1.mrna1;Target=FBgn0037212.1 1 252 +
Chr2	stalkie_big_nohaplotig	CDS	112268165	112268209	.	+	0	Parent=FBgn0037212.1.mrna1;Target=FBgn0037212.1 253 297 +
Chr2	stalkie_big_nohaplotig	CDS	112268978	112269087	.	+	0	Parent=FBgn0037212.1.mrna1;Target=FBgn0037212.1 298 407 +
Chr2	stalkie_big_nohaplotig	CDS	112274893	112275073	.	+	1	Parent=FBgn0037212.1.mrna1;Target=FBgn0037212.1 408 588 +
Chr2	stalkie_big_nohaplotig	CDS	112294160	112294275	.	+	0	Parent=FBgn0037212.1.mrna1;Target=FBgn0037212.1 589 704 +
Chr2	stalkie_big_nohaplotig	CDS	112294414	112294582	.	+	1	Parent=FBgn0037212.1.mrna1;Target=FBgn0037212.1 705 873 +
Chr2	stalkie_big_nohaplotig	CDS	112294640	112294776	.	+	0	Parent=FBgn0037212.1.mrna1;Target=FBgn0037212.1 874 1010 +
Chr2	stalkie_big_nohaplotig	CDS	112294839	112294982	.	+	1	Parent=FBgn0037212.1.mrna1;Target=FBgn0037212.1 1011 1154 +
Chr2	stalkie_big_nohaplotig	CDS	112296768	112296887	.	+	1	Parent=FBgn0037212.1.mrna1;Target=FBgn0037212.1 1155 1274 +
Chr2	stalkie_big_nohaplotig	CDS	112297080	112297329	.	+	1	Parent=FBgn0037212.1.mrna1;Target=FBgn0037212.1 1275 1524 +
Chr2	stalkie_big_nohaplotig	CDS	112297411	112297605	.	+	0	Parent=FBgn0037212.1.mrna1;Target=FBgn0037212.1 1525 1719 +
Chr2	gffcl	locus	112280938	112281095	.	-	.	ID=RLOC_00020694;geneIDs=comp1070057_c0_seq1.path1;transcripts=comp1070057_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112280938	112281095	.	-	.	ID=comp1070057_c0_seq1.mrna1;geneID=comp1070057_c0_seq1.path1;Name=comp1070057_c0_seq1;Dir=indeterminatecoverage=66.8;identity=81.6;matches=129;mismatches=28;indels=1;unknowns=0;Target=comp1070057_c0_seq1 157 1 .;CDS_Target=comp1070057_c0_seq1 93 1 .;locus=RLOC_00020694
Chr2	stalkie_big_nohaplotig	exon	112280938	112281095	81	-	.	Parent=comp1070057_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112281002	112281095	.	-	0	Parent=comp1070057_c0_seq1.mrna1
Chr2	gffcl	locus	112292606	112292960	.	-	.	ID=RLOC_00020695;geneIDs=comp145687_c0_seq1.path1;transcripts=comp145687_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112292606	112292960	.	-	.	ID=comp145687_c0_seq1.mrna1;geneID=comp145687_c0_seq1.path1;Name=comp145687_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=354;mismatches=1;indels=0;unknowns=0;Target=comp145687_c0_seq1 355 1 .;CDS_Target=comp145687_c0_seq1 30 1 .;locus=RLOC_00020695
Chr2	stalkie_big_nohaplotig	exon	112292606	112292960	99	-	.	Parent=comp145687_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112292931	112292960	.	-	0	Parent=comp145687_c0_seq1.mrna1
Chr2	gffcl	locus	112298376	112299264	.	-	.	ID=RLOC_00020696;geneIDs=comp154605_c0_seq1.path1;transcripts=comp154605_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112298376	112299264	.	-	.	ID=comp154605_c0_seq1.mrna1;geneID=comp154605_c0_seq1.path1;Name=comp154605_c0_seq1;Dir=indeterminatecoverage=98.7;identity=100.0;matches=889;mismatches=0;indels=0;unknowns=0;Target=comp154605_c0_seq1 894 6 .;CDS_Target=comp154605_c0_seq1 627 454 .;locus=RLOC_00020696
Chr2	stalkie_big_nohaplotig	exon	112298376	112299264	100	-	.	Parent=comp154605_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112298643	112298816	.	-	0	Parent=comp154605_c0_seq1.mrna1
Chr2	gffcl	locus	112300018	112301065	.	-	.	ID=RLOC_00020697;geneIDs=comp159347_c0_seq1.path1;transcripts=comp159347_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112300018	112301065	.	-	.	ID=comp159347_c0_seq1.mrna1;geneID=comp159347_c0_seq1.path1;Name=comp159347_c0_seq1;Dir=indeterminatecoverage=95.5;identity=100.0;matches=1048;mismatches=0;indels=0;unknowns=0;Target=comp159347_c0_seq1 1078 31 .;CDS_Target=comp159347_c0_seq1 136 32 .;locus=RLOC_00020697
Chr2	stalkie_big_nohaplotig	exon	112300018	112301065	100	-	.	Parent=comp159347_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112300960	112301064	.	-	0	Parent=comp159347_c0_seq1.mrna1
Chr2	gffcl	locus	112303550	112303876	.	-	.	ID=RLOC_00020698;geneIDs=FBgn0063670.1.path1;transcripts=FBgn0063670.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112303550	112303876	.	-	.	ID=FBgn0063670.1.mrna1;geneID=FBgn0063670.1.path1;Name=FBgn0063670.1;Dir=sensecoverage=100.0;identity=100.0;matches=264;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020698
Chr2	stalkie_big_nohaplotig	exon	112303550	112303679	100	-	.	Parent=FBgn0063670.1.mrna1;Target=FBgn0063670.1 135 264 +
Chr2	stalkie_big_nohaplotig	exon	112303743	112303876	100	-	.	Parent=FBgn0063670.1.mrna1;Target=FBgn0063670.1 1 134 +
Chr2	stalkie_big_nohaplotig	CDS	112303550	112303679	.	-	1	Parent=FBgn0063670.1.mrna1;Target=FBgn0063670.1 135 264 +
Chr2	stalkie_big_nohaplotig	CDS	112303743	112303876	.	-	0	Parent=FBgn0063670.1.mrna1;Target=FBgn0063670.1 1 134 +
Chr2	gffcl	locus	112308964	112317274	.	+	.	ID=RLOC_00020699;geneIDs=FBgn0039955.1.path1;transcripts=FBgn0039955.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112308964	112317274	.	+	.	ID=FBgn0039955.1.mrna1;geneID=FBgn0039955.1.path1;Name=FBgn0039955.1;Dir=sensecoverage=100.0;identity=100.0;matches=3423;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020699
Chr2	stalkie_big_nohaplotig	exon	112308964	112308976	100	+	.	Parent=FBgn0039955.1.mrna1;Target=FBgn0039955.1 1 13 +
Chr2	stalkie_big_nohaplotig	exon	112309032	112309768	100	+	.	Parent=FBgn0039955.1.mrna1;Target=FBgn0039955.1 14 750 +
Chr2	stalkie_big_nohaplotig	exon	112314436	112314570	100	+	.	Parent=FBgn0039955.1.mrna1;Target=FBgn0039955.1 751 885 +
Chr2	stalkie_big_nohaplotig	exon	112314627	112314721	100	+	.	Parent=FBgn0039955.1.mrna1;Target=FBgn0039955.1 886 980 +
Chr2	stalkie_big_nohaplotig	exon	112314781	112315717	100	+	.	Parent=FBgn0039955.1.mrna1;Target=FBgn0039955.1 981 1917 +
Chr2	stalkie_big_nohaplotig	exon	112315769	112317274	100	+	.	Parent=FBgn0039955.1.mrna1;Target=FBgn0039955.1 1918 3423 +
Chr2	stalkie_big_nohaplotig	CDS	112308964	112308976	.	+	0	Parent=FBgn0039955.1.mrna1;Target=FBgn0039955.1 1 13 +
Chr2	stalkie_big_nohaplotig	CDS	112309032	112309768	.	+	2	Parent=FBgn0039955.1.mrna1;Target=FBgn0039955.1 14 750 +
Chr2	stalkie_big_nohaplotig	CDS	112314436	112314570	.	+	0	Parent=FBgn0039955.1.mrna1;Target=FBgn0039955.1 751 885 +
Chr2	stalkie_big_nohaplotig	CDS	112314627	112314721	.	+	0	Parent=FBgn0039955.1.mrna1;Target=FBgn0039955.1 886 980 +
Chr2	stalkie_big_nohaplotig	CDS	112314781	112315717	.	+	1	Parent=FBgn0039955.1.mrna1;Target=FBgn0039955.1 981 1917 +
Chr2	stalkie_big_nohaplotig	CDS	112315769	112317274	.	+	0	Parent=FBgn0039955.1.mrna1;Target=FBgn0039955.1 1918 3423 +
Chr2	gffcl	locus	112310717	112312027	.	-	.	ID=RLOC_00020700;geneIDs=AAEL010802.1.path1;transcripts=AAEL010802.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112310717	112312027	.	-	.	ID=AAEL010802.1.mrna1;geneID=AAEL010802.1.path1;Name=AAEL010802.1;Dir=sensecoverage=100.0;identity=100.0;matches=549;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020700
Chr2	stalkie_big_nohaplotig	exon	112310717	112310962	100	-	.	Parent=AAEL010802.1.mrna1;Target=AAEL010802.1 304 549 +
Chr2	stalkie_big_nohaplotig	exon	112311021	112311259	100	-	.	Parent=AAEL010802.1.mrna1;Target=AAEL010802.1 65 303 +
Chr2	stalkie_big_nohaplotig	exon	112311964	112312027	100	-	.	Parent=AAEL010802.1.mrna1;Target=AAEL010802.1 1 64 +
Chr2	stalkie_big_nohaplotig	CDS	112310717	112310962	.	-	0	Parent=AAEL010802.1.mrna1;Target=AAEL010802.1 304 549 +
Chr2	stalkie_big_nohaplotig	CDS	112311021	112311259	.	-	2	Parent=AAEL010802.1.mrna1;Target=AAEL010802.1 65 303 +
Chr2	stalkie_big_nohaplotig	CDS	112311964	112312027	.	-	0	Parent=AAEL010802.1.mrna1;Target=AAEL010802.1 1 64 +
Chr2	gffcl	locus	112319352	112319739	.	-	.	ID=RLOC_00020701;geneIDs=FBgn0050354.1.path1;transcripts=FBgn0050354.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112319352	112319739	.	-	.	ID=FBgn0050354.1.mrna1;geneID=FBgn0050354.1.path1;Name=FBgn0050354.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=339;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020701
Chr2	stalkie_big_nohaplotig	exon	112319352	112319522	100	-	.	Parent=FBgn0050354.1.mrna1;Target=FBgn0050354.1 339 169 .
Chr2	stalkie_big_nohaplotig	exon	112319572	112319739	100	-	.	Parent=FBgn0050354.1.mrna1;Target=FBgn0050354.1 168 1 .
Chr2	stalkie_big_nohaplotig	CDS	112319352	112319522	.	-	0	Parent=FBgn0050354.1.mrna1;Target=FBgn0050354.1 339 169 .
Chr2	stalkie_big_nohaplotig	CDS	112319572	112319739	.	-	0	Parent=FBgn0050354.1.mrna1;Target=FBgn0050354.1 168 1 .
Chr2	gffcl	locus	112325909	112829176	.	.	.	ID=RLOC_00020702;geneIDs=FBgn0025781.1.path1,FBgn0036082.1.path1,FBgn0038098.1.path1,FBgn0259214.2.path1,comp116913_c0_seq1.path1,comp152690_c0_seq1.path1,comp153499_c0_seq1.path1,comp163312_c2_seq1.path1;transcripts=comp163312_c2_seq1.mrna1,FBgn0259214.2.mrna1,FBgn0036082.1.mrna1,FBgn0038098.1.mrna1,comp152690_c0_seq1.mrna1,comp116913_c0_seq1.mrna1,comp153499_c0_seq1.mrna1,FBgn0025781.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112325909	112342802	.	-	.	ID=comp163312_c2_seq1.mrna1;geneID=comp163312_c2_seq1.path1;Name=comp163312_c2_seq1;Dir=sensecoverage=53.6;identity=99.8;matches=3177;mismatches=6;indels=1;unknowns=0;locus=RLOC_00020702
Chr2	stalkie_big_nohaplotig	exon	112325909	112325977	98	-	.	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 5874 5942 +
Chr2	stalkie_big_nohaplotig	exon	112326061	112326279	100	-	.	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 5655 5873 +
Chr2	stalkie_big_nohaplotig	exon	112327750	112327852	100	-	.	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 5552 5654 +
Chr2	stalkie_big_nohaplotig	exon	112328548	112328690	99	-	.	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 5408 5551 +
Chr2	stalkie_big_nohaplotig	exon	112328747	112328958	100	-	.	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 5196 5407 +
Chr2	stalkie_big_nohaplotig	exon	112330771	112330969	99	-	.	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 4997 5195 +
Chr2	stalkie_big_nohaplotig	exon	112331676	112331989	99	-	.	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 4683 4996 +
Chr2	stalkie_big_nohaplotig	exon	112334014	112334101	100	-	.	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 4595 4682 +
Chr2	stalkie_big_nohaplotig	exon	112336658	112337102	99	-	.	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 4150 4594 +
Chr2	stalkie_big_nohaplotig	exon	112337167	112337408	99	-	.	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 3908 4149 +
Chr2	stalkie_big_nohaplotig	exon	112337883	112338125	100	-	.	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 3665 3907 +
Chr2	stalkie_big_nohaplotig	exon	112338635	112339047	99	-	.	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 3252 3664 +
Chr2	stalkie_big_nohaplotig	exon	112341476	112341668	100	-	.	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 3059 3251 +
Chr2	stalkie_big_nohaplotig	exon	112342503	112342802	100	-	.	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 2759 3058 +
Chr2	stalkie_big_nohaplotig	CDS	112327832	112327852	.	-	1	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 5552 5572 +
Chr2	stalkie_big_nohaplotig	CDS	112328548	112328690	.	-	0	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 5408 5551 +
Chr2	stalkie_big_nohaplotig	CDS	112328747	112328958	.	-	2	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 5196 5407 +
Chr2	stalkie_big_nohaplotig	CDS	112330771	112330969	.	-	0	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 4997 5195 +
Chr2	stalkie_big_nohaplotig	CDS	112331676	112331989	.	-	2	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 4683 4996 +
Chr2	stalkie_big_nohaplotig	CDS	112334014	112334101	.	-	0	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 4595 4682 +
Chr2	stalkie_big_nohaplotig	CDS	112336658	112337102	.	-	1	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 4150 4594 +
Chr2	stalkie_big_nohaplotig	CDS	112337167	112337408	.	-	0	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 3908 4149 +
Chr2	stalkie_big_nohaplotig	CDS	112337883	112338125	.	-	0	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 3665 3907 +
Chr2	stalkie_big_nohaplotig	CDS	112338635	112339047	.	-	2	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 3252 3664 +
Chr2	stalkie_big_nohaplotig	CDS	112341476	112341668	.	-	0	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 3059 3251 +
Chr2	stalkie_big_nohaplotig	CDS	112342503	112342802	.	-	0	Parent=comp163312_c2_seq1.mrna1;Target=comp163312_c2_seq1 2759 3058 +
Chr2	stalkie_big_nohaplotig	mRNA	112328548	112829176	.	-	.	ID=FBgn0259214.2.mrna1;geneID=FBgn0259214.2.path1;Name=FBgn0259214.2;Dir=sensecoverage=77.2;identity=93.8;matches=3192;mismatches=50;indels=162;unknowns=0;locus=RLOC_00020702
Chr2	stalkie_big_nohaplotig	exon	112328548	112328690	99	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 4591 4734 +
Chr2	stalkie_big_nohaplotig	exon	112328747	112328958	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 4379 4590 +
Chr2	stalkie_big_nohaplotig	exon	112330771	112330969	99	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 4180 4378 +
Chr2	stalkie_big_nohaplotig	exon	112331676	112331989	99	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 3866 4179 +
Chr2	stalkie_big_nohaplotig	exon	112334014	112334101	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 3778 3865 +
Chr2	stalkie_big_nohaplotig	exon	112336658	112337102	99	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 3333 3777 +
Chr2	stalkie_big_nohaplotig	exon	112337167	112337408	99	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 3091 3332 +
Chr2	stalkie_big_nohaplotig	exon	112337883	112338125	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 2848 3090 +
Chr2	stalkie_big_nohaplotig	exon	112338635	112339047	99	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 2435 2847 +
Chr2	stalkie_big_nohaplotig	exon	112341476	112341668	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 2242 2434 +
Chr2	stalkie_big_nohaplotig	exon	112342503	112342801	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1943 2241 +
Chr2	stalkie_big_nohaplotig	exon	112351900	112351905	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1937 1942 +
Chr2	stalkie_big_nohaplotig	exon	112357994	112357999	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1931 1936 +
Chr2	stalkie_big_nohaplotig	exon	112359106	112359113	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1923 1930 +
Chr2	stalkie_big_nohaplotig	exon	112371042	112371043	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1921 1922 +
Chr2	stalkie_big_nohaplotig	exon	112385814	112385824	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1910 1920 +
Chr2	stalkie_big_nohaplotig	exon	112386827	112386833	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1903 1909 +
Chr2	stalkie_big_nohaplotig	exon	112408077	112408087	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1875 1885 +
Chr2	stalkie_big_nohaplotig	exon	112408168	112408188	48	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1845 1874 +
Chr2	stalkie_big_nohaplotig	exon	112411519	112411528	90	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1835 1844 +
Chr2	stalkie_big_nohaplotig	exon	112411904	112411921	55	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1797 1806 +
Chr2	stalkie_big_nohaplotig	exon	112412622	112412624	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1794 1796 +
Chr2	stalkie_big_nohaplotig	exon	112416974	112416975	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1792 1793 +
Chr2	stalkie_big_nohaplotig	exon	112431330	112431339	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1782 1791 +
Chr2	stalkie_big_nohaplotig	exon	112478361	112478371	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1758 1768 +
Chr2	stalkie_big_nohaplotig	exon	112482446	112482477	51	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1628 1672 +
Chr2	stalkie_big_nohaplotig	exon	112487314	112487320	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1621 1627 +
Chr2	stalkie_big_nohaplotig	exon	112506173	112506177	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1616 1620 +
Chr2	stalkie_big_nohaplotig	exon	112533623	112533630	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1608 1615 +
Chr2	stalkie_big_nohaplotig	exon	112545982	112545991	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1578 1587 +
Chr2	stalkie_big_nohaplotig	exon	112566609	112566614	50	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1572 1577 +
Chr2	stalkie_big_nohaplotig	exon	112595096	112595106	90	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1537 1547 +
Chr2	stalkie_big_nohaplotig	exon	112604324	112604367	59	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1505 1536 +
Chr2	stalkie_big_nohaplotig	exon	112604419	112604421	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1502 1504 +
Chr2	stalkie_big_nohaplotig	exon	112604665	112604670	83	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1496 1501 +
Chr2	stalkie_big_nohaplotig	exon	112604732	112604734	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1493 1495 +
Chr2	stalkie_big_nohaplotig	exon	112604798	112604804	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1486 1492 +
Chr2	stalkie_big_nohaplotig	exon	112604931	112604982	17	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1474 1485 +
Chr2	stalkie_big_nohaplotig	exon	112605005	112605053	40	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1449 1473 +
Chr2	stalkie_big_nohaplotig	exon	112605332	112605340	88	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1440 1448 +
Chr2	stalkie_big_nohaplotig	exon	112605505	112605536	34	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1427 1439 +
Chr2	stalkie_big_nohaplotig	exon	112644543	112644549	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1420 1426 +
Chr2	stalkie_big_nohaplotig	exon	112662398	112662409	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1398 1409 +
Chr2	stalkie_big_nohaplotig	exon	112666321	112666323	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1395 1397 +
Chr2	stalkie_big_nohaplotig	exon	112672292	112672297	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1389 1394 +
Chr2	stalkie_big_nohaplotig	exon	112685634	112685640	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1382 1388 +
Chr2	stalkie_big_nohaplotig	exon	112707484	112707490	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1375 1381 +
Chr2	stalkie_big_nohaplotig	exon	112711141	112711148	75	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1367 1374 +
Chr2	stalkie_big_nohaplotig	exon	112716069	112716070	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1365 1366 +
Chr2	stalkie_big_nohaplotig	exon	112735384	112735396	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1352 1364 +
Chr2	stalkie_big_nohaplotig	exon	112753459	112753462	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1347 1350 +
Chr2	stalkie_big_nohaplotig	exon	112759078	112759108	22	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1238 1260 +
Chr2	stalkie_big_nohaplotig	exon	112780469	112780477	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1117 1125 +
Chr2	stalkie_big_nohaplotig	exon	112793144	112793146	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1114 1116 +
Chr2	stalkie_big_nohaplotig	exon	112800508	112800510	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1111 1113 +
Chr2	stalkie_big_nohaplotig	exon	112805657	112805663	85	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1104 1110 +
Chr2	stalkie_big_nohaplotig	exon	112806149	112806156	75	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1096 1103 +
Chr2	stalkie_big_nohaplotig	exon	112812304	112812313	90	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1086 1095 +
Chr2	stalkie_big_nohaplotig	exon	112815721	112815727	85	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1079 1085 +
Chr2	stalkie_big_nohaplotig	exon	112829165	112829176	100	-	.	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 1067 1078 +
Chr2	stalkie_big_nohaplotig	CDS	112328548	112328690	.	-	0	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 4591 4734 +
Chr2	stalkie_big_nohaplotig	CDS	112328747	112328958	.	-	2	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 4379 4590 +
Chr2	stalkie_big_nohaplotig	CDS	112330771	112330969	.	-	0	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 4180 4378 +
Chr2	stalkie_big_nohaplotig	CDS	112331676	112331989	.	-	2	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 3866 4179 +
Chr2	stalkie_big_nohaplotig	CDS	112334014	112334101	.	-	0	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 3778 3865 +
Chr2	stalkie_big_nohaplotig	CDS	112336658	112337102	.	-	1	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 3333 3777 +
Chr2	stalkie_big_nohaplotig	CDS	112337167	112337408	.	-	0	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 3091 3332 +
Chr2	stalkie_big_nohaplotig	CDS	112337883	112338125	.	-	0	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 2848 3090 +
Chr2	stalkie_big_nohaplotig	CDS	112338635	112339047	.	-	2	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 2435 2847 +
Chr2	stalkie_big_nohaplotig	CDS	112341476	112341668	.	-	0	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 2242 2434 +
Chr2	stalkie_big_nohaplotig	CDS	112342503	112342631	.	-	0	Parent=FBgn0259214.2.mrna1;Target=FBgn0259214.2 2113 2241 +
Chr2	stalkie_big_nohaplotig	mRNA	112477174	112480981	.	-	.	ID=FBgn0036082.1.mrna1;geneID=FBgn0036082.1.path1;Name=FBgn0036082.1;Dir=sensecoverage=100.0;identity=100.0;matches=1599;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020702
Chr2	stalkie_big_nohaplotig	exon	112477174	112477647	100	-	.	Parent=FBgn0036082.1.mrna1;Target=FBgn0036082.1 1126 1599 +
Chr2	stalkie_big_nohaplotig	exon	112477898	112477995	100	-	.	Parent=FBgn0036082.1.mrna1;Target=FBgn0036082.1 1028 1125 +
Chr2	stalkie_big_nohaplotig	exon	112478158	112478294	100	-	.	Parent=FBgn0036082.1.mrna1;Target=FBgn0036082.1 891 1027 +
Chr2	stalkie_big_nohaplotig	exon	112478346	112478684	100	-	.	Parent=FBgn0036082.1.mrna1;Target=FBgn0036082.1 552 890 +
Chr2	stalkie_big_nohaplotig	exon	112479486	112479639	100	-	.	Parent=FBgn0036082.1.mrna1;Target=FBgn0036082.1 398 551 +
Chr2	stalkie_big_nohaplotig	exon	112479857	112480097	100	-	.	Parent=FBgn0036082.1.mrna1;Target=FBgn0036082.1 157 397 +
Chr2	stalkie_big_nohaplotig	exon	112480826	112480981	100	-	.	Parent=FBgn0036082.1.mrna1;Target=FBgn0036082.1 1 156 +
Chr2	stalkie_big_nohaplotig	CDS	112477174	112477647	.	-	0	Parent=FBgn0036082.1.mrna1;Target=FBgn0036082.1 1126 1599 +
Chr2	stalkie_big_nohaplotig	CDS	112477898	112477995	.	-	2	Parent=FBgn0036082.1.mrna1;Target=FBgn0036082.1 1028 1125 +
Chr2	stalkie_big_nohaplotig	CDS	112478158	112478294	.	-	1	Parent=FBgn0036082.1.mrna1;Target=FBgn0036082.1 891 1027 +
Chr2	stalkie_big_nohaplotig	CDS	112478346	112478684	.	-	1	Parent=FBgn0036082.1.mrna1;Target=FBgn0036082.1 552 890 +
Chr2	stalkie_big_nohaplotig	CDS	112479486	112479639	.	-	2	Parent=FBgn0036082.1.mrna1;Target=FBgn0036082.1 398 551 +
Chr2	stalkie_big_nohaplotig	CDS	112479857	112480097	.	-	0	Parent=FBgn0036082.1.mrna1;Target=FBgn0036082.1 157 397 +
Chr2	stalkie_big_nohaplotig	CDS	112480826	112480981	.	-	0	Parent=FBgn0036082.1.mrna1;Target=FBgn0036082.1 1 156 +
Chr2	stalkie_big_nohaplotig	mRNA	112588850	112597829	.	-	.	ID=FBgn0038098.1.mrna1;geneID=FBgn0038098.1.path1;Name=FBgn0038098.1;Dir=sensecoverage=100.0;identity=100.0;matches=2016;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020702
Chr2	stalkie_big_nohaplotig	exon	112588850	112588947	100	-	.	Parent=FBgn0038098.1.mrna1;Target=FBgn0038098.1 1919 2016 +
Chr2	stalkie_big_nohaplotig	exon	112589013	112589165	100	-	.	Parent=FBgn0038098.1.mrna1;Target=FBgn0038098.1 1766 1918 +
Chr2	stalkie_big_nohaplotig	exon	112589983	112590111	100	-	.	Parent=FBgn0038098.1.mrna1;Target=FBgn0038098.1 1637 1765 +
Chr2	stalkie_big_nohaplotig	exon	112590218	112590373	100	-	.	Parent=FBgn0038098.1.mrna1;Target=FBgn0038098.1 1481 1636 +
Chr2	stalkie_big_nohaplotig	exon	112591563	112591826	100	-	.	Parent=FBgn0038098.1.mrna1;Target=FBgn0038098.1 1217 1480 +
Chr2	stalkie_big_nohaplotig	exon	112591878	112591997	100	-	.	Parent=FBgn0038098.1.mrna1;Target=FBgn0038098.1 1097 1216 +
Chr2	stalkie_big_nohaplotig	exon	112594308	112594427	100	-	.	Parent=FBgn0038098.1.mrna1;Target=FBgn0038098.1 977 1096 +
Chr2	stalkie_big_nohaplotig	exon	112594488	112594967	100	-	.	Parent=FBgn0038098.1.mrna1;Target=FBgn0038098.1 497 976 +
Chr2	stalkie_big_nohaplotig	exon	112595023	112595140	100	-	.	Parent=FBgn0038098.1.mrna1;Target=FBgn0038098.1 379 496 +
Chr2	stalkie_big_nohaplotig	exon	112595215	112595513	100	-	.	Parent=FBgn0038098.1.mrna1;Target=FBgn0038098.1 80 378 +
Chr2	stalkie_big_nohaplotig	exon	112597751	112597829	100	-	.	Parent=FBgn0038098.1.mrna1;Target=FBgn0038098.1 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	112588850	112588947	.	-	2	Parent=FBgn0038098.1.mrna1;Target=FBgn0038098.1 1919 2016 +
Chr2	stalkie_big_nohaplotig	CDS	112589013	112589165	.	-	2	Parent=FBgn0038098.1.mrna1;Target=FBgn0038098.1 1766 1918 +
Chr2	stalkie_big_nohaplotig	CDS	112589983	112590111	.	-	2	Parent=FBgn0038098.1.mrna1;Target=FBgn0038098.1 1637 1765 +
Chr2	stalkie_big_nohaplotig	CDS	112590218	112590373	.	-	2	Parent=FBgn0038098.1.mrna1;Target=FBgn0038098.1 1481 1636 +
Chr2	stalkie_big_nohaplotig	CDS	112591563	112591826	.	-	2	Parent=FBgn0038098.1.mrna1;Target=FBgn0038098.1 1217 1480 +
Chr2	stalkie_big_nohaplotig	CDS	112591878	112591997	.	-	2	Parent=FBgn0038098.1.mrna1;Target=FBgn0038098.1 1097 1216 +
Chr2	stalkie_big_nohaplotig	CDS	112594308	112594427	.	-	2	Parent=FBgn0038098.1.mrna1;Target=FBgn0038098.1 977 1096 +
Chr2	stalkie_big_nohaplotig	CDS	112594488	112594967	.	-	2	Parent=FBgn0038098.1.mrna1;Target=FBgn0038098.1 497 976 +
Chr2	stalkie_big_nohaplotig	CDS	112595023	112595140	.	-	0	Parent=FBgn0038098.1.mrna1;Target=FBgn0038098.1 379 496 +
Chr2	stalkie_big_nohaplotig	CDS	112595215	112595513	.	-	2	Parent=FBgn0038098.1.mrna1;Target=FBgn0038098.1 80 378 +
Chr2	stalkie_big_nohaplotig	CDS	112597751	112597829	.	-	0	Parent=FBgn0038098.1.mrna1;Target=FBgn0038098.1 1 79 +
Chr2	stalkie_big_nohaplotig	mRNA	112593555	112594330	.	+	.	ID=comp152690_c0_seq1.mrna1;geneID=comp152690_c0_seq1.path1;Name=comp152690_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=775;mismatches=1;indels=0;unknowns=0;Target=comp152690_c0_seq1 776 1 .;CDS_Target=comp152690_c0_seq1 132 1 .;locus=RLOC_00020702
Chr2	stalkie_big_nohaplotig	exon	112593555	112594330	99	+	.	Parent=comp152690_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112593555	112593686	.	+	0	Parent=comp152690_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112595492	112601915	.	-	.	ID=comp116913_c0_seq1.mrna1;geneID=comp116913_c0_seq1.path1;Name=comp116913_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=391;mismatches=0;indels=0;unknowns=0;Target=comp116913_c0_seq1 210 302 .;locus=RLOC_00020702
Chr2	stalkie_big_nohaplotig	exon	112595492	112595513	100	-	.	Parent=comp116913_c0_seq1.mrna1;Target=comp116913_c0_seq1 1 22 -
Chr2	stalkie_big_nohaplotig	exon	112601547	112601915	100	-	.	Parent=comp116913_c0_seq1.mrna1;Target=comp116913_c0_seq1 23 391 -
Chr2	stalkie_big_nohaplotig	CDS	112601734	112601826	.	-	0	Parent=comp116913_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112604760	112607523	.	-	.	ID=comp153499_c0_seq1.mrna1;geneID=comp153499_c0_seq1.path1;Name=comp153499_c0_seq1;Dir=antisensecoverage=99.0;identity=100.0;matches=765;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020702
Chr2	stalkie_big_nohaplotig	exon	112604760	112604982	100	-	.	Parent=comp153499_c0_seq1.mrna1;Target=comp153499_c0_seq1 1 223 -
Chr2	stalkie_big_nohaplotig	exon	112606071	112606225	100	-	.	Parent=comp153499_c0_seq1.mrna1;Target=comp153499_c0_seq1 224 378 -
Chr2	stalkie_big_nohaplotig	exon	112607077	112607208	100	-	.	Parent=comp153499_c0_seq1.mrna1;Target=comp153499_c0_seq1 379 510 -
Chr2	stalkie_big_nohaplotig	exon	112607269	112607523	100	-	.	Parent=comp153499_c0_seq1.mrna1;Target=comp153499_c0_seq1 511 765 -
Chr2	stalkie_big_nohaplotig	CDS	112604838	112604982	.	-	1	Parent=comp153499_c0_seq1.mrna1;Target=comp153499_c0_seq1 79 223 .
Chr2	stalkie_big_nohaplotig	CDS	112606071	112606225	.	-	0	Parent=comp153499_c0_seq1.mrna1;Target=comp153499_c0_seq1 224 378 .
Chr2	stalkie_big_nohaplotig	CDS	112607077	112607208	.	-	0	Parent=comp153499_c0_seq1.mrna1;Target=comp153499_c0_seq1 379 510 .
Chr2	stalkie_big_nohaplotig	CDS	112607269	112607523	.	-	0	Parent=comp153499_c0_seq1.mrna1;Target=comp153499_c0_seq1 511 765 .
Chr2	stalkie_big_nohaplotig	mRNA	112750288	112759721	.	-	.	ID=FBgn0025781.1.mrna1;geneID=FBgn0025781.1.path1;Name=FBgn0025781.1;Dir=sensecoverage=100.0;identity=99.7;matches=2166;mismatches=6;indels=0;unknowns=0;locus=RLOC_00020702
Chr2	stalkie_big_nohaplotig	exon	112750288	112750671	99	-	.	Parent=FBgn0025781.1.mrna1;Target=FBgn0025781.1 1789 2172 +
Chr2	stalkie_big_nohaplotig	exon	112757416	112757584	99	-	.	Parent=FBgn0025781.1.mrna1;Target=FBgn0025781.1 1620 1788 +
Chr2	stalkie_big_nohaplotig	exon	112757635	112757828	98	-	.	Parent=FBgn0025781.1.mrna1;Target=FBgn0025781.1 1426 1619 +
Chr2	stalkie_big_nohaplotig	exon	112757885	112758090	100	-	.	Parent=FBgn0025781.1.mrna1;Target=FBgn0025781.1 1220 1425 +
Chr2	stalkie_big_nohaplotig	exon	112758145	112758224	100	-	.	Parent=FBgn0025781.1.mrna1;Target=FBgn0025781.1 1140 1219 +
Chr2	stalkie_big_nohaplotig	exon	112758287	112758544	99	-	.	Parent=FBgn0025781.1.mrna1;Target=FBgn0025781.1 882 1139 +
Chr2	stalkie_big_nohaplotig	exon	112758601	112758761	99	-	.	Parent=FBgn0025781.1.mrna1;Target=FBgn0025781.1 721 881 +
Chr2	stalkie_big_nohaplotig	exon	112758815	112758930	100	-	.	Parent=FBgn0025781.1.mrna1;Target=FBgn0025781.1 605 720 +
Chr2	stalkie_big_nohaplotig	exon	112758996	112759158	100	-	.	Parent=FBgn0025781.1.mrna1;Target=FBgn0025781.1 442 604 +
Chr2	stalkie_big_nohaplotig	exon	112759214	112759549	100	-	.	Parent=FBgn0025781.1.mrna1;Target=FBgn0025781.1 106 441 +
Chr2	stalkie_big_nohaplotig	exon	112759617	112759721	100	-	.	Parent=FBgn0025781.1.mrna1;Target=FBgn0025781.1 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	112750288	112750671	.	-	0	Parent=FBgn0025781.1.mrna1;Target=FBgn0025781.1 1789 2172 +
Chr2	stalkie_big_nohaplotig	CDS	112757416	112757584	.	-	1	Parent=FBgn0025781.1.mrna1;Target=FBgn0025781.1 1620 1788 +
Chr2	stalkie_big_nohaplotig	CDS	112757635	112757828	.	-	0	Parent=FBgn0025781.1.mrna1;Target=FBgn0025781.1 1426 1619 +
Chr2	stalkie_big_nohaplotig	CDS	112757885	112758090	.	-	2	Parent=FBgn0025781.1.mrna1;Target=FBgn0025781.1 1220 1425 +
Chr2	stalkie_big_nohaplotig	CDS	112758145	112758224	.	-	1	Parent=FBgn0025781.1.mrna1;Target=FBgn0025781.1 1140 1219 +
Chr2	stalkie_big_nohaplotig	CDS	112758287	112758544	.	-	1	Parent=FBgn0025781.1.mrna1;Target=FBgn0025781.1 882 1139 +
Chr2	stalkie_big_nohaplotig	CDS	112758601	112758761	.	-	0	Parent=FBgn0025781.1.mrna1;Target=FBgn0025781.1 721 881 +
Chr2	stalkie_big_nohaplotig	CDS	112758815	112758930	.	-	2	Parent=FBgn0025781.1.mrna1;Target=FBgn0025781.1 605 720 +
Chr2	stalkie_big_nohaplotig	CDS	112758996	112759158	.	-	0	Parent=FBgn0025781.1.mrna1;Target=FBgn0025781.1 442 604 +
Chr2	stalkie_big_nohaplotig	CDS	112759214	112759549	.	-	0	Parent=FBgn0025781.1.mrna1;Target=FBgn0025781.1 106 441 +
Chr2	stalkie_big_nohaplotig	CDS	112759617	112759721	.	-	0	Parent=FBgn0025781.1.mrna1;Target=FBgn0025781.1 1 105 +
Chr2	gffcl	locus	112359077	112388709	.	+	.	ID=RLOC_00020703;geneIDs=FBgn0040034.1.path1,FBgn0261338.1.path1,FBgn0261339.1.path1;transcripts=FBgn0040034.1.mrna1,FBgn0261338.1.mrna1,FBgn0261339.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112359077	112376385	.	+	.	ID=FBgn0040034.1.mrna1;geneID=FBgn0040034.1.path1;Name=FBgn0040034.1;Dir=sensecoverage=100.0;identity=99.7;matches=2175;mismatches=5;indels=1;unknowns=0;locus=RLOC_00020703
Chr2	stalkie_big_nohaplotig	exon	112359077	112359097	100	+	.	Parent=FBgn0040034.1.mrna1;Target=FBgn0040034.1 1 21 +
Chr2	stalkie_big_nohaplotig	exon	112360469	112360576	100	+	.	Parent=FBgn0040034.1.mrna1;Target=FBgn0040034.1 22 129 +
Chr2	stalkie_big_nohaplotig	exon	112360648	112360792	100	+	.	Parent=FBgn0040034.1.mrna1;Target=FBgn0040034.1 130 274 +
Chr2	stalkie_big_nohaplotig	exon	112361053	112361627	99	+	.	Parent=FBgn0040034.1.mrna1;Target=FBgn0040034.1 275 849 +
Chr2	stalkie_big_nohaplotig	exon	112364781	112365023	100	+	.	Parent=FBgn0040034.1.mrna1;Target=FBgn0040034.1 850 1092 +
Chr2	stalkie_big_nohaplotig	exon	112366347	112366712	100	+	.	Parent=FBgn0040034.1.mrna1;Target=FBgn0040034.1 1093 1458 +
Chr2	stalkie_big_nohaplotig	exon	112369911	112370044	100	+	.	Parent=FBgn0040034.1.mrna1;Target=FBgn0040034.1 1459 1592 +
Chr2	stalkie_big_nohaplotig	exon	112374794	112375313	100	+	.	Parent=FBgn0040034.1.mrna1;Target=FBgn0040034.1 1593 2112 +
Chr2	stalkie_big_nohaplotig	exon	112376318	112376385	98	+	.	Parent=FBgn0040034.1.mrna1;Target=FBgn0040034.1 2113 2181 +
Chr2	stalkie_big_nohaplotig	CDS	112359077	112359097	.	+	0	Parent=FBgn0040034.1.mrna1;Target=FBgn0040034.1 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	112360469	112360576	.	+	0	Parent=FBgn0040034.1.mrna1;Target=FBgn0040034.1 22 129 +
Chr2	stalkie_big_nohaplotig	CDS	112360648	112360792	.	+	0	Parent=FBgn0040034.1.mrna1;Target=FBgn0040034.1 130 274 +
Chr2	stalkie_big_nohaplotig	CDS	112361053	112361627	.	+	2	Parent=FBgn0040034.1.mrna1;Target=FBgn0040034.1 275 849 +
Chr2	stalkie_big_nohaplotig	CDS	112364781	112365023	.	+	0	Parent=FBgn0040034.1.mrna1;Target=FBgn0040034.1 850 1092 +
Chr2	stalkie_big_nohaplotig	CDS	112366347	112366712	.	+	0	Parent=FBgn0040034.1.mrna1;Target=FBgn0040034.1 1093 1458 +
Chr2	stalkie_big_nohaplotig	CDS	112369911	112370044	.	+	0	Parent=FBgn0040034.1.mrna1;Target=FBgn0040034.1 1459 1592 +
Chr2	stalkie_big_nohaplotig	CDS	112374794	112375313	.	+	1	Parent=FBgn0040034.1.mrna1;Target=FBgn0040034.1 1593 2112 +
Chr2	stalkie_big_nohaplotig	CDS	112376318	112376385	.	+	0	Parent=FBgn0040034.1.mrna1;Target=FBgn0040034.1 2113 2181 +
Chr2	stalkie_big_nohaplotig	mRNA	112376364	112382817	.	+	.	ID=FBgn0261338.1.mrna1;geneID=FBgn0261338.1.path1;Name=FBgn0261338.1;Dir=sensecoverage=100.0;identity=99.9;matches=1438;mismatches=0;indels=2;unknowns=0;Target=FBgn0261338.1 3 26 +;locus=RLOC_00020703
Chr2	stalkie_big_nohaplotig	exon	112376364	112376442	98	+	.	Parent=FBgn0261338.1.mrna1;Target=FBgn0261338.1 1 80 +
Chr2	stalkie_big_nohaplotig	exon	112377808	112378084	100	+	.	Parent=FBgn0261338.1.mrna1;Target=FBgn0261338.1 81 357 +
Chr2	stalkie_big_nohaplotig	exon	112378162	112378824	100	+	.	Parent=FBgn0261338.1.mrna1;Target=FBgn0261338.1 358 1020 +
Chr2	stalkie_big_nohaplotig	exon	112379587	112379810	100	+	.	Parent=FBgn0261338.1.mrna1;Target=FBgn0261338.1 1021 1244 +
Chr2	stalkie_big_nohaplotig	exon	112382543	112382681	100	+	.	Parent=FBgn0261338.1.mrna1;Target=FBgn0261338.1 1245 1383 +
Chr2	stalkie_big_nohaplotig	exon	112382762	112382817	98	+	.	Parent=FBgn0261338.1.mrna1;Target=FBgn0261338.1 1384 1440 +
Chr2	stalkie_big_nohaplotig	CDS	112376366	112376388	.	+	0	Parent=FBgn0261338.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112382769	112388709	.	+	.	ID=FBgn0261339.1.mrna1;geneID=FBgn0261339.1.path1;Name=FBgn0261339.1;Dir=sensecoverage=100.0;identity=100.0;matches=2687;mismatches=0;indels=1;unknowns=0;Target=FBgn0261339.1 3 53 +;locus=RLOC_00020703
Chr2	stalkie_big_nohaplotig	exon	112382769	112383166	99	+	.	Parent=FBgn0261339.1.mrna1;Target=FBgn0261339.1 1 399 +
Chr2	stalkie_big_nohaplotig	exon	112383969	112384950	100	+	.	Parent=FBgn0261339.1.mrna1;Target=FBgn0261339.1 400 1381 +
Chr2	stalkie_big_nohaplotig	exon	112385934	112386232	100	+	.	Parent=FBgn0261339.1.mrna1;Target=FBgn0261339.1 1382 1680 +
Chr2	stalkie_big_nohaplotig	exon	112386344	112386676	100	+	.	Parent=FBgn0261339.1.mrna1;Target=FBgn0261339.1 1681 2013 +
Chr2	stalkie_big_nohaplotig	exon	112386773	112387183	100	+	.	Parent=FBgn0261339.1.mrna1;Target=FBgn0261339.1 2014 2424 +
Chr2	stalkie_big_nohaplotig	exon	112387240	112387443	100	+	.	Parent=FBgn0261339.1.mrna1;Target=FBgn0261339.1 2425 2628 +
Chr2	stalkie_big_nohaplotig	exon	112388650	112388709	100	+	.	Parent=FBgn0261339.1.mrna1;Target=FBgn0261339.1 2629 2688 +
Chr2	stalkie_big_nohaplotig	CDS	112382771	112382820	.	+	0	Parent=FBgn0261339.1.mrna1
Chr2	gffcl	locus	112393661	112394219	.	+	.	ID=RLOC_00020704;geneIDs=FBgn0052230.3.path1;transcripts=FBgn0052230.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112393661	112394219	.	+	.	ID=FBgn0052230.3.mrna1;geneID=FBgn0052230.3.path1;Name=FBgn0052230.3;Dir=sensecoverage=100.0;identity=100.0;matches=276;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020704
Chr2	stalkie_big_nohaplotig	exon	112393661	112393729	100	+	.	Parent=FBgn0052230.3.mrna1;Target=FBgn0052230.3 1 69 +
Chr2	stalkie_big_nohaplotig	exon	112393953	112394099	100	+	.	Parent=FBgn0052230.3.mrna1;Target=FBgn0052230.3 70 216 +
Chr2	stalkie_big_nohaplotig	exon	112394160	112394219	100	+	.	Parent=FBgn0052230.3.mrna1;Target=FBgn0052230.3 217 276 +
Chr2	stalkie_big_nohaplotig	CDS	112393661	112393729	.	+	0	Parent=FBgn0052230.3.mrna1;Target=FBgn0052230.3 1 69 +
Chr2	stalkie_big_nohaplotig	CDS	112393953	112394099	.	+	0	Parent=FBgn0052230.3.mrna1;Target=FBgn0052230.3 70 216 +
Chr2	stalkie_big_nohaplotig	CDS	112394160	112394219	.	+	0	Parent=FBgn0052230.3.mrna1;Target=FBgn0052230.3 217 276 +
Chr2	gffcl	locus	112397127	112403371	.	-	.	ID=RLOC_00020705;geneIDs=FBgn0263916.1.path1;transcripts=FBgn0263916.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112397127	112403371	.	-	.	ID=FBgn0263916.1.mrna1;geneID=FBgn0263916.1.path1;Name=FBgn0263916.1;Dir=sensecoverage=100.0;identity=99.9;matches=1040;mismatches=0;indels=1;unknowns=0;locus=RLOC_00020705
Chr2	stalkie_big_nohaplotig	exon	112397127	112397199	98	-	.	Parent=FBgn0263916.1.mrna1;Target=FBgn0263916.1 968 1041 +
Chr2	stalkie_big_nohaplotig	exon	112397264	112397435	100	-	.	Parent=FBgn0263916.1.mrna1;Target=FBgn0263916.1 796 967 +
Chr2	stalkie_big_nohaplotig	exon	112398550	112398782	100	-	.	Parent=FBgn0263916.1.mrna1;Target=FBgn0263916.1 563 795 +
Chr2	stalkie_big_nohaplotig	exon	112398843	112398988	100	-	.	Parent=FBgn0263916.1.mrna1;Target=FBgn0263916.1 417 562 +
Chr2	stalkie_big_nohaplotig	exon	112399225	112399370	100	-	.	Parent=FBgn0263916.1.mrna1;Target=FBgn0263916.1 271 416 +
Chr2	stalkie_big_nohaplotig	exon	112399442	112399572	100	-	.	Parent=FBgn0263916.1.mrna1;Target=FBgn0263916.1 140 270 +
Chr2	stalkie_big_nohaplotig	exon	112403175	112403282	100	-	.	Parent=FBgn0263916.1.mrna1;Target=FBgn0263916.1 32 139 +
Chr2	stalkie_big_nohaplotig	exon	112403341	112403371	100	-	.	Parent=FBgn0263916.1.mrna1;Target=FBgn0263916.1 1 31 +
Chr2	stalkie_big_nohaplotig	CDS	112397127	112397199	.	-	2	Parent=FBgn0263916.1.mrna1;Target=FBgn0263916.1 968 1041 +
Chr2	stalkie_big_nohaplotig	CDS	112397264	112397435	.	-	0	Parent=FBgn0263916.1.mrna1;Target=FBgn0263916.1 796 967 +
Chr2	stalkie_big_nohaplotig	CDS	112398550	112398782	.	-	2	Parent=FBgn0263916.1.mrna1;Target=FBgn0263916.1 563 795 +
Chr2	stalkie_big_nohaplotig	CDS	112398843	112398988	.	-	1	Parent=FBgn0263916.1.mrna1;Target=FBgn0263916.1 417 562 +
Chr2	stalkie_big_nohaplotig	CDS	112399225	112399370	.	-	0	Parent=FBgn0263916.1.mrna1;Target=FBgn0263916.1 271 416 +
Chr2	stalkie_big_nohaplotig	CDS	112399442	112399572	.	-	2	Parent=FBgn0263916.1.mrna1;Target=FBgn0263916.1 140 270 +
Chr2	stalkie_big_nohaplotig	CDS	112403175	112403282	.	-	2	Parent=FBgn0263916.1.mrna1;Target=FBgn0263916.1 32 139 +
Chr2	stalkie_big_nohaplotig	CDS	112403341	112403371	.	-	0	Parent=FBgn0263916.1.mrna1;Target=FBgn0263916.1 1 31 +
Chr2	gffcl	locus	112403486	112403795	.	-	.	ID=RLOC_00020706;geneIDs=comp143466_c0_seq1.path1;transcripts=comp143466_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112403486	112403795	.	-	.	ID=comp143466_c0_seq1.mrna1;geneID=comp143466_c0_seq1.path1;Name=comp143466_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.4;matches=308;mismatches=2;indels=0;unknowns=0;Target=comp143466_c0_seq1 312 3 .;CDS_Target=comp143466_c0_seq1 98 3 .;locus=RLOC_00020706
Chr2	stalkie_big_nohaplotig	exon	112403486	112403795	99	-	.	Parent=comp143466_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112403700	112403795	.	-	0	Parent=comp143466_c0_seq1.mrna1
Chr2	gffcl	locus	112405375	112408536	.	+	.	ID=RLOC_00020707;geneIDs=FBgn0053217.1.path1;transcripts=FBgn0053217.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112405375	112408536	.	+	.	ID=FBgn0053217.1.mrna1;geneID=FBgn0053217.1.path1;Name=FBgn0053217.1;Dir=sensecoverage=100.0;identity=99.1;matches=2263;mismatches=20;indels=0;unknowns=0;locus=RLOC_00020707
Chr2	stalkie_big_nohaplotig	exon	112405375	112405494	100	+	.	Parent=FBgn0053217.1.mrna1;Target=FBgn0053217.1 1 120 +
Chr2	stalkie_big_nohaplotig	exon	112405550	112405766	98	+	.	Parent=FBgn0053217.1.mrna1;Target=FBgn0053217.1 121 337 +
Chr2	stalkie_big_nohaplotig	exon	112405822	112406338	98	+	.	Parent=FBgn0053217.1.mrna1;Target=FBgn0053217.1 338 854 +
Chr2	stalkie_big_nohaplotig	exon	112406391	112406570	98	+	.	Parent=FBgn0053217.1.mrna1;Target=FBgn0053217.1 855 1034 +
Chr2	stalkie_big_nohaplotig	exon	112406641	112406748	98	+	.	Parent=FBgn0053217.1.mrna1;Target=FBgn0053217.1 1035 1142 +
Chr2	stalkie_big_nohaplotig	exon	112406814	112406958	100	+	.	Parent=FBgn0053217.1.mrna1;Target=FBgn0053217.1 1143 1287 +
Chr2	stalkie_big_nohaplotig	exon	112407481	112407645	98	+	.	Parent=FBgn0053217.1.mrna1;Target=FBgn0053217.1 1288 1452 +
Chr2	stalkie_big_nohaplotig	exon	112407706	112408536	99	+	.	Parent=FBgn0053217.1.mrna1;Target=FBgn0053217.1 1453 2283 +
Chr2	stalkie_big_nohaplotig	CDS	112405375	112405494	.	+	0	Parent=FBgn0053217.1.mrna1;Target=FBgn0053217.1 1 120 +
Chr2	stalkie_big_nohaplotig	CDS	112405550	112405766	.	+	0	Parent=FBgn0053217.1.mrna1;Target=FBgn0053217.1 121 337 +
Chr2	stalkie_big_nohaplotig	CDS	112405822	112406338	.	+	2	Parent=FBgn0053217.1.mrna1;Target=FBgn0053217.1 338 854 +
Chr2	stalkie_big_nohaplotig	CDS	112406391	112406570	.	+	1	Parent=FBgn0053217.1.mrna1;Target=FBgn0053217.1 855 1034 +
Chr2	stalkie_big_nohaplotig	CDS	112406641	112406748	.	+	1	Parent=FBgn0053217.1.mrna1;Target=FBgn0053217.1 1035 1142 +
Chr2	stalkie_big_nohaplotig	CDS	112406814	112406958	.	+	1	Parent=FBgn0053217.1.mrna1;Target=FBgn0053217.1 1143 1287 +
Chr2	stalkie_big_nohaplotig	CDS	112407481	112407645	.	+	0	Parent=FBgn0053217.1.mrna1;Target=FBgn0053217.1 1288 1452 +
Chr2	stalkie_big_nohaplotig	CDS	112407706	112408536	.	+	0	Parent=FBgn0053217.1.mrna1;Target=FBgn0053217.1 1453 2283 +
Chr2	gffcl	locus	112407443	112427898	.	.	.	ID=RLOC_00020708;geneIDs=FBgn0026150.1.path1,comp118648_c0_seq1.path1,comp152955_c0_seq1.path1;transcripts=comp152955_c0_seq1.mrna1,FBgn0026150.1.mrna1,comp118648_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112407443	112425923	.	+	.	ID=comp152955_c0_seq1.mrna1;geneID=comp152955_c0_seq1.path1;Name=comp152955_c0_seq1;Dir=indeterminatecoverage=98.2;identity=99.9;matches=1275;mismatches=0;indels=1;unknowns=0;Target=comp152955_c0_seq1 886 731 .;locus=RLOC_00020708
Chr2	stalkie_big_nohaplotig	exon	112407443	112407448	100	+	.	Parent=comp152955_c0_seq1.mrna1;Target=comp152955_c0_seq1 30 25 .
Chr2	stalkie_big_nohaplotig	exon	112410188	112410197	100	+	.	Parent=comp152955_c0_seq1.mrna1;Target=comp152955_c0_seq1 40 31 .
Chr2	stalkie_big_nohaplotig	exon	112424665	112425923	99	+	.	Parent=comp152955_c0_seq1.mrna1;Target=comp152955_c0_seq1 1300 41 .
Chr2	stalkie_big_nohaplotig	CDS	112425354	112425509	.	+	0	Parent=comp152955_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112411927	112427898	.	+	.	ID=FBgn0026150.1.mrna1;geneID=FBgn0026150.1.path1;Name=FBgn0026150.1;Dir=sensecoverage=100.0;identity=100.0;matches=1875;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020708
Chr2	stalkie_big_nohaplotig	exon	112411927	112412380	100	+	.	Parent=FBgn0026150.1.mrna1;Target=FBgn0026150.1 1 454 +
Chr2	stalkie_big_nohaplotig	exon	112421764	112421967	100	+	.	Parent=FBgn0026150.1.mrna1;Target=FBgn0026150.1 455 658 +
Chr2	stalkie_big_nohaplotig	exon	112422022	112422218	100	+	.	Parent=FBgn0026150.1.mrna1;Target=FBgn0026150.1 659 855 +
Chr2	stalkie_big_nohaplotig	exon	112423961	112424050	100	+	.	Parent=FBgn0026150.1.mrna1;Target=FBgn0026150.1 856 945 +
Chr2	stalkie_big_nohaplotig	exon	112424113	112424294	100	+	.	Parent=FBgn0026150.1.mrna1;Target=FBgn0026150.1 946 1127 +
Chr2	stalkie_big_nohaplotig	exon	112424348	112424497	100	+	.	Parent=FBgn0026150.1.mrna1;Target=FBgn0026150.1 1128 1277 +
Chr2	stalkie_big_nohaplotig	exon	112425901	112426030	100	+	.	Parent=FBgn0026150.1.mrna1;Target=FBgn0026150.1 1278 1407 +
Chr2	stalkie_big_nohaplotig	exon	112426571	112426748	100	+	.	Parent=FBgn0026150.1.mrna1;Target=FBgn0026150.1 1408 1585 +
Chr2	stalkie_big_nohaplotig	exon	112426815	112426990	100	+	.	Parent=FBgn0026150.1.mrna1;Target=FBgn0026150.1 1586 1761 +
Chr2	stalkie_big_nohaplotig	exon	112427785	112427898	100	+	.	Parent=FBgn0026150.1.mrna1;Target=FBgn0026150.1 1762 1875 +
Chr2	stalkie_big_nohaplotig	CDS	112411927	112412380	.	+	0	Parent=FBgn0026150.1.mrna1;Target=FBgn0026150.1 1 454 +
Chr2	stalkie_big_nohaplotig	CDS	112421764	112421967	.	+	2	Parent=FBgn0026150.1.mrna1;Target=FBgn0026150.1 455 658 +
Chr2	stalkie_big_nohaplotig	CDS	112422022	112422218	.	+	2	Parent=FBgn0026150.1.mrna1;Target=FBgn0026150.1 659 855 +
Chr2	stalkie_big_nohaplotig	CDS	112423961	112424050	.	+	0	Parent=FBgn0026150.1.mrna1;Target=FBgn0026150.1 856 945 +
Chr2	stalkie_big_nohaplotig	CDS	112424113	112424294	.	+	0	Parent=FBgn0026150.1.mrna1;Target=FBgn0026150.1 946 1127 +
Chr2	stalkie_big_nohaplotig	CDS	112424348	112424497	.	+	1	Parent=FBgn0026150.1.mrna1;Target=FBgn0026150.1 1128 1277 +
Chr2	stalkie_big_nohaplotig	CDS	112425901	112426030	.	+	1	Parent=FBgn0026150.1.mrna1;Target=FBgn0026150.1 1278 1407 +
Chr2	stalkie_big_nohaplotig	CDS	112426571	112426748	.	+	0	Parent=FBgn0026150.1.mrna1;Target=FBgn0026150.1 1408 1585 +
Chr2	stalkie_big_nohaplotig	CDS	112426815	112426990	.	+	2	Parent=FBgn0026150.1.mrna1;Target=FBgn0026150.1 1586 1761 +
Chr2	stalkie_big_nohaplotig	CDS	112427785	112427898	.	+	0	Parent=FBgn0026150.1.mrna1;Target=FBgn0026150.1 1762 1875 +
Chr2	stalkie_big_nohaplotig	mRNA	112422196	112422496	.	-	.	ID=comp118648_c0_seq1.mrna1;geneID=comp118648_c0_seq1.path1;Name=comp118648_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=301;mismatches=0;indels=0;unknowns=0;Target=comp118648_c0_seq1 301 1 .;CDS_Target=comp118648_c0_seq1 80 3 .;locus=RLOC_00020708
Chr2	stalkie_big_nohaplotig	exon	112422196	112422496	100	-	.	Parent=comp118648_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112422417	112422494	.	-	0	Parent=comp118648_c0_seq1.mrna1
Chr2	gffcl	locus	112428062	112431019	.	-	.	ID=RLOC_00020709;geneIDs=FBgn0259697.1.path1;transcripts=FBgn0259697.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112428062	112431019	.	-	.	ID=FBgn0259697.1.mrna1;geneID=FBgn0259697.1.path1;Name=FBgn0259697.1;Dir=sensecoverage=98.6;identity=100.0;matches=1314;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020709
Chr2	stalkie_big_nohaplotig	exon	112428062	112428220	100	-	.	Parent=FBgn0259697.1.mrna1;Target=FBgn0259697.1 1174 1332 +
Chr2	stalkie_big_nohaplotig	exon	112428276	112428449	100	-	.	Parent=FBgn0259697.1.mrna1;Target=FBgn0259697.1 1000 1173 +
Chr2	stalkie_big_nohaplotig	exon	112428513	112428624	100	-	.	Parent=FBgn0259697.1.mrna1;Target=FBgn0259697.1 888 999 +
Chr2	stalkie_big_nohaplotig	exon	112429158	112429464	100	-	.	Parent=FBgn0259697.1.mrna1;Target=FBgn0259697.1 581 887 +
Chr2	stalkie_big_nohaplotig	exon	112429688	112430081	100	-	.	Parent=FBgn0259697.1.mrna1;Target=FBgn0259697.1 187 580 +
Chr2	stalkie_big_nohaplotig	exon	112430852	112431019	100	-	.	Parent=FBgn0259697.1.mrna1;Target=FBgn0259697.1 19 186 +
Chr2	stalkie_big_nohaplotig	CDS	112428062	112428220	.	-	0	Parent=FBgn0259697.1.mrna1;Target=FBgn0259697.1 1174 1332 +
Chr2	stalkie_big_nohaplotig	CDS	112428276	112428449	.	-	0	Parent=FBgn0259697.1.mrna1;Target=FBgn0259697.1 1000 1173 +
Chr2	stalkie_big_nohaplotig	CDS	112428513	112428624	.	-	1	Parent=FBgn0259697.1.mrna1;Target=FBgn0259697.1 888 999 +
Chr2	stalkie_big_nohaplotig	CDS	112429158	112429464	.	-	2	Parent=FBgn0259697.1.mrna1;Target=FBgn0259697.1 581 887 +
Chr2	stalkie_big_nohaplotig	CDS	112429688	112430081	.	-	0	Parent=FBgn0259697.1.mrna1;Target=FBgn0259697.1 187 580 +
Chr2	stalkie_big_nohaplotig	CDS	112430852	112431019	.	-	0	Parent=FBgn0259697.1.mrna1;Target=FBgn0259697.1 19 186 +
Chr2	gffcl	locus	112459153	112461054	.	+	.	ID=RLOC_00020710;geneIDs=FBgn0003486.1.path1;transcripts=FBgn0003486.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112459153	112461054	.	+	.	ID=FBgn0003486.1.mrna1;geneID=FBgn0003486.1.path1;Name=FBgn0003486.1;Dir=sensecoverage=100.0;identity=99.9;matches=1379;mismatches=0;indels=1;unknowns=0;locus=RLOC_00020710
Chr2	stalkie_big_nohaplotig	exon	112459153	112459230	100	+	.	Parent=FBgn0003486.1.mrna1;Target=FBgn0003486.1 1 78 +
Chr2	stalkie_big_nohaplotig	exon	112459754	112461054	99	+	.	Parent=FBgn0003486.1.mrna1;Target=FBgn0003486.1 79 1380 +
Chr2	stalkie_big_nohaplotig	CDS	112459155	112459230	.	+	0	Parent=FBgn0003486.1.mrna1;Target=FBgn0003486.1 3 78 +
Chr2	stalkie_big_nohaplotig	CDS	112459754	112459799	.	+	2	Parent=FBgn0003486.1.mrna1;Target=FBgn0003486.1 79 125 +
Chr2	gffcl	locus	112466786	112469505	.	-	.	ID=RLOC_00020711;geneIDs=FBgn0011336.1.path1;transcripts=FBgn0011336.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112466786	112469505	.	-	.	ID=FBgn0011336.1.mrna1;geneID=FBgn0011336.1.path1;Name=FBgn0011336.1;Dir=sensecoverage=100.0;identity=100.0;matches=2349;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020711
Chr2	stalkie_big_nohaplotig	exon	112466786	112466854	100	-	.	Parent=FBgn0011336.1.mrna1;Target=FBgn0011336.1 2281 2349 +
Chr2	stalkie_big_nohaplotig	exon	112466913	112467111	100	-	.	Parent=FBgn0011336.1.mrna1;Target=FBgn0011336.1 2082 2280 +
Chr2	stalkie_big_nohaplotig	exon	112467168	112467638	100	-	.	Parent=FBgn0011336.1.mrna1;Target=FBgn0011336.1 1611 2081 +
Chr2	stalkie_big_nohaplotig	exon	112467829	112468025	100	-	.	Parent=FBgn0011336.1.mrna1;Target=FBgn0011336.1 1414 1610 +
Chr2	stalkie_big_nohaplotig	exon	112468093	112469505	100	-	.	Parent=FBgn0011336.1.mrna1;Target=FBgn0011336.1 1 1413 +
Chr2	stalkie_big_nohaplotig	CDS	112466786	112466854	.	-	0	Parent=FBgn0011336.1.mrna1;Target=FBgn0011336.1 2281 2349 +
Chr2	stalkie_big_nohaplotig	CDS	112466913	112467111	.	-	1	Parent=FBgn0011336.1.mrna1;Target=FBgn0011336.1 2082 2280 +
Chr2	stalkie_big_nohaplotig	CDS	112467168	112467638	.	-	1	Parent=FBgn0011336.1.mrna1;Target=FBgn0011336.1 1611 2081 +
Chr2	stalkie_big_nohaplotig	CDS	112467829	112468025	.	-	0	Parent=FBgn0011336.1.mrna1;Target=FBgn0011336.1 1414 1610 +
Chr2	stalkie_big_nohaplotig	CDS	112468093	112469505	.	-	0	Parent=FBgn0011336.1.mrna1;Target=FBgn0011336.1 1 1413 +
Chr2	gffcl	locus	112485301	112492325	.	+	.	ID=RLOC_00020712;geneIDs=FBgn0010215.1.path1;transcripts=FBgn0010215.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112485301	112492325	.	+	.	ID=FBgn0010215.1.mrna1;geneID=FBgn0010215.1.path1;Name=FBgn0010215.1;Dir=sensecoverage=99.9;identity=100.0;matches=2280;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020712
Chr2	stalkie_big_nohaplotig	exon	112485301	112485466	100	+	.	Parent=FBgn0010215.1.mrna1;Target=FBgn0010215.1 1 166 +
Chr2	stalkie_big_nohaplotig	exon	112487867	112488243	100	+	.	Parent=FBgn0010215.1.mrna1;Target=FBgn0010215.1 167 543 +
Chr2	stalkie_big_nohaplotig	exon	112488424	112488741	100	+	.	Parent=FBgn0010215.1.mrna1;Target=FBgn0010215.1 544 861 +
Chr2	stalkie_big_nohaplotig	exon	112488807	112489010	100	+	.	Parent=FBgn0010215.1.mrna1;Target=FBgn0010215.1 862 1065 +
Chr2	stalkie_big_nohaplotig	exon	112489609	112490293	100	+	.	Parent=FBgn0010215.1.mrna1;Target=FBgn0010215.1 1066 1750 +
Chr2	stalkie_big_nohaplotig	exon	112490371	112490522	100	+	.	Parent=FBgn0010215.1.mrna1;Target=FBgn0010215.1 1751 1902 +
Chr2	stalkie_big_nohaplotig	exon	112491445	112491517	100	+	.	Parent=FBgn0010215.1.mrna1;Target=FBgn0010215.1 1903 1975 +
Chr2	stalkie_big_nohaplotig	exon	112491903	112491970	100	+	.	Parent=FBgn0010215.1.mrna1;Target=FBgn0010215.1 1976 2043 +
Chr2	stalkie_big_nohaplotig	exon	112492031	112492212	100	+	.	Parent=FBgn0010215.1.mrna1;Target=FBgn0010215.1 2044 2225 +
Chr2	stalkie_big_nohaplotig	exon	112492270	112492325	98	+	.	Parent=FBgn0010215.1.mrna1;Target=FBgn0010215.1 2226 2281 +
Chr2	stalkie_big_nohaplotig	CDS	112485301	112485466	.	+	0	Parent=FBgn0010215.1.mrna1;Target=FBgn0010215.1 1 166 +
Chr2	stalkie_big_nohaplotig	CDS	112487867	112488243	.	+	2	Parent=FBgn0010215.1.mrna1;Target=FBgn0010215.1 167 543 +
Chr2	stalkie_big_nohaplotig	CDS	112488424	112488741	.	+	0	Parent=FBgn0010215.1.mrna1;Target=FBgn0010215.1 544 861 +
Chr2	stalkie_big_nohaplotig	CDS	112488807	112489010	.	+	0	Parent=FBgn0010215.1.mrna1;Target=FBgn0010215.1 862 1065 +
Chr2	stalkie_big_nohaplotig	CDS	112489609	112490293	.	+	0	Parent=FBgn0010215.1.mrna1;Target=FBgn0010215.1 1066 1750 +
Chr2	stalkie_big_nohaplotig	CDS	112490371	112490522	.	+	2	Parent=FBgn0010215.1.mrna1;Target=FBgn0010215.1 1751 1902 +
Chr2	stalkie_big_nohaplotig	CDS	112491445	112491517	.	+	0	Parent=FBgn0010215.1.mrna1;Target=FBgn0010215.1 1903 1975 +
Chr2	stalkie_big_nohaplotig	CDS	112491903	112491970	.	+	2	Parent=FBgn0010215.1.mrna1;Target=FBgn0010215.1 1976 2043 +
Chr2	stalkie_big_nohaplotig	CDS	112492031	112492212	.	+	0	Parent=FBgn0010215.1.mrna1;Target=FBgn0010215.1 2044 2225 +
Chr2	stalkie_big_nohaplotig	CDS	112492270	112492324	.	+	1	Parent=FBgn0010215.1.mrna1;Target=FBgn0010215.1 2226 2280 +
Chr2	gffcl	locus	112501180	112517966	.	+	.	ID=RLOC_00020713;geneIDs=FBgn0011288.1.path1;transcripts=FBgn0011288.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112501180	112517966	.	+	.	ID=FBgn0011288.1.mrna1;geneID=FBgn0011288.1.path1;Name=FBgn0011288.1;Dir=sensecoverage=98.6;identity=100.0;matches=645;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020713
Chr2	stalkie_big_nohaplotig	exon	112501180	112501281	100	+	.	Parent=FBgn0011288.1.mrna1;Target=FBgn0011288.1 10 111 +
Chr2	stalkie_big_nohaplotig	exon	112502616	112502657	100	+	.	Parent=FBgn0011288.1.mrna1;Target=FBgn0011288.1 112 153 +
Chr2	stalkie_big_nohaplotig	exon	112509866	112509914	100	+	.	Parent=FBgn0011288.1.mrna1;Target=FBgn0011288.1 154 202 +
Chr2	stalkie_big_nohaplotig	exon	112514474	112514591	100	+	.	Parent=FBgn0011288.1.mrna1;Target=FBgn0011288.1 203 320 +
Chr2	stalkie_big_nohaplotig	exon	112514655	112514783	100	+	.	Parent=FBgn0011288.1.mrna1;Target=FBgn0011288.1 321 449 +
Chr2	stalkie_big_nohaplotig	exon	112516699	112516843	100	+	.	Parent=FBgn0011288.1.mrna1;Target=FBgn0011288.1 450 594 +
Chr2	stalkie_big_nohaplotig	exon	112517907	112517966	100	+	.	Parent=FBgn0011288.1.mrna1;Target=FBgn0011288.1 595 654 +
Chr2	stalkie_big_nohaplotig	CDS	112501180	112501281	.	+	0	Parent=FBgn0011288.1.mrna1;Target=FBgn0011288.1 10 111 +
Chr2	stalkie_big_nohaplotig	CDS	112502616	112502657	.	+	0	Parent=FBgn0011288.1.mrna1;Target=FBgn0011288.1 112 153 +
Chr2	stalkie_big_nohaplotig	CDS	112509866	112509914	.	+	0	Parent=FBgn0011288.1.mrna1;Target=FBgn0011288.1 154 202 +
Chr2	stalkie_big_nohaplotig	CDS	112514474	112514591	.	+	2	Parent=FBgn0011288.1.mrna1;Target=FBgn0011288.1 203 320 +
Chr2	stalkie_big_nohaplotig	CDS	112514655	112514783	.	+	1	Parent=FBgn0011288.1.mrna1;Target=FBgn0011288.1 321 449 +
Chr2	stalkie_big_nohaplotig	CDS	112516699	112516843	.	+	1	Parent=FBgn0011288.1.mrna1;Target=FBgn0011288.1 450 594 +
Chr2	stalkie_big_nohaplotig	CDS	112517907	112517966	.	+	0	Parent=FBgn0011288.1.mrna1;Target=FBgn0011288.1 595 654 +
Chr2	gffcl	locus	112511925	112512312	.	-	.	ID=RLOC_00020714;geneIDs=comp131015_c0_seq1.path1;transcripts=comp131015_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112511925	112512312	.	-	.	ID=comp131015_c0_seq1.mrna1;geneID=comp131015_c0_seq1.path1;Name=comp131015_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=388;mismatches=0;indels=0;unknowns=0;Target=comp131015_c0_seq1 388 1 .;CDS_Target=comp131015_c0_seq1 284 168 .;locus=RLOC_00020714
Chr2	stalkie_big_nohaplotig	exon	112511925	112512312	100	-	.	Parent=comp131015_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112512029	112512145	.	-	0	Parent=comp131015_c0_seq1.mrna1
Chr2	gffcl	locus	112512596	112514293	.	+	.	ID=RLOC_00020715;geneIDs=comp155511_c0_seq1.path1;transcripts=comp155511_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112512596	112514293	.	+	.	ID=comp155511_c0_seq1.mrna1;geneID=comp155511_c0_seq1.path1;Name=comp155511_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1698;mismatches=0;indels=1;unknowns=0;Target=comp155511_c0_seq1 1699 1 .;CDS_Target=comp155511_c0_seq1 679 494 .;locus=RLOC_00020715
Chr2	stalkie_big_nohaplotig	exon	112512596	112514293	99	+	.	Parent=comp155511_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112513089	112513274	.	+	0	Parent=comp155511_c0_seq1.mrna1
Chr2	gffcl	locus	112521025	112524923	.	-	.	ID=RLOC_00020716;geneIDs=FBgn0038105.1.path1;transcripts=FBgn0038105.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112521025	112524923	.	-	.	ID=FBgn0038105.1.mrna1;geneID=FBgn0038105.1.path1;Name=FBgn0038105.1;Dir=sensecoverage=100.0;identity=99.9;matches=1417;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020716
Chr2	stalkie_big_nohaplotig	exon	112521025	112521162	100	-	.	Parent=FBgn0038105.1.mrna1;Target=FBgn0038105.1 1282 1419 +
Chr2	stalkie_big_nohaplotig	exon	112521283	112521733	100	-	.	Parent=FBgn0038105.1.mrna1;Target=FBgn0038105.1 831 1281 +
Chr2	stalkie_big_nohaplotig	exon	112521790	112521994	100	-	.	Parent=FBgn0038105.1.mrna1;Target=FBgn0038105.1 626 830 +
Chr2	stalkie_big_nohaplotig	exon	112522795	112522900	100	-	.	Parent=FBgn0038105.1.mrna1;Target=FBgn0038105.1 520 625 +
Chr2	stalkie_big_nohaplotig	exon	112522974	112523308	99	-	.	Parent=FBgn0038105.1.mrna1;Target=FBgn0038105.1 185 519 +
Chr2	stalkie_big_nohaplotig	exon	112524740	112524923	100	-	.	Parent=FBgn0038105.1.mrna1;Target=FBgn0038105.1 1 184 +
Chr2	stalkie_big_nohaplotig	CDS	112521025	112521162	.	-	0	Parent=FBgn0038105.1.mrna1;Target=FBgn0038105.1 1282 1419 +
Chr2	stalkie_big_nohaplotig	CDS	112521283	112521733	.	-	1	Parent=FBgn0038105.1.mrna1;Target=FBgn0038105.1 831 1281 +
Chr2	stalkie_big_nohaplotig	CDS	112521790	112521994	.	-	2	Parent=FBgn0038105.1.mrna1;Target=FBgn0038105.1 626 830 +
Chr2	stalkie_big_nohaplotig	CDS	112522795	112522900	.	-	0	Parent=FBgn0038105.1.mrna1;Target=FBgn0038105.1 520 625 +
Chr2	stalkie_big_nohaplotig	CDS	112522974	112523308	.	-	2	Parent=FBgn0038105.1.mrna1;Target=FBgn0038105.1 185 519 +
Chr2	stalkie_big_nohaplotig	CDS	112524740	112524923	.	-	0	Parent=FBgn0038105.1.mrna1;Target=FBgn0038105.1 1 184 +
Chr2	gffcl	locus	112534670	112536343	.	+	.	ID=RLOC_00020717;geneIDs=comp166573_c0_seq1.path1;transcripts=comp166573_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112534670	112536343	.	+	.	ID=comp166573_c0_seq1.mrna1;geneID=comp166573_c0_seq1.path1;Name=comp166573_c0_seq1;Dir=sensecoverage=99.8;identity=100.0;matches=631;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020717
Chr2	stalkie_big_nohaplotig	exon	112534670	112534752	100	+	.	Parent=comp166573_c0_seq1.mrna1;Target=comp166573_c0_seq1 1 83 +
Chr2	stalkie_big_nohaplotig	exon	112535679	112535838	100	+	.	Parent=comp166573_c0_seq1.mrna1;Target=comp166573_c0_seq1 84 243 +
Chr2	stalkie_big_nohaplotig	exon	112535896	112536056	100	+	.	Parent=comp166573_c0_seq1.mrna1;Target=comp166573_c0_seq1 244 404 +
Chr2	stalkie_big_nohaplotig	exon	112536117	112536343	100	+	.	Parent=comp166573_c0_seq1.mrna1;Target=comp166573_c0_seq1 405 631 +
Chr2	stalkie_big_nohaplotig	CDS	112535695	112535838	.	+	0	Parent=comp166573_c0_seq1.mrna1;Target=comp166573_c0_seq1 100 243 +
Chr2	stalkie_big_nohaplotig	CDS	112535896	112536056	.	+	0	Parent=comp166573_c0_seq1.mrna1;Target=comp166573_c0_seq1 244 404 +
Chr2	stalkie_big_nohaplotig	CDS	112536117	112536216	.	+	1	Parent=comp166573_c0_seq1.mrna1;Target=comp166573_c0_seq1 405 504 +
Chr2	gffcl	locus	112536836	112545058	.	-	.	ID=RLOC_00020718;geneIDs=FBgn0039959.1.path1;transcripts=FBgn0039959.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112536836	112545058	.	-	.	ID=FBgn0039959.1.mrna1;geneID=FBgn0039959.1.path1;Name=FBgn0039959.1;Dir=sensecoverage=100.0;identity=99.9;matches=7966;mismatches=8;indels=0;unknowns=0;locus=RLOC_00020718
Chr2	stalkie_big_nohaplotig	exon	112536836	112543717	99	-	.	Parent=FBgn0039959.1.mrna1;Target=FBgn0039959.1 1093 7974 +
Chr2	stalkie_big_nohaplotig	exon	112543857	112544827	100	-	.	Parent=FBgn0039959.1.mrna1;Target=FBgn0039959.1 122 1092 +
Chr2	stalkie_big_nohaplotig	exon	112544886	112544988	100	-	.	Parent=FBgn0039959.1.mrna1;Target=FBgn0039959.1 19 121 +
Chr2	stalkie_big_nohaplotig	exon	112545041	112545058	100	-	.	Parent=FBgn0039959.1.mrna1;Target=FBgn0039959.1 1 18 +
Chr2	stalkie_big_nohaplotig	CDS	112536836	112543717	.	-	0	Parent=FBgn0039959.1.mrna1;Target=FBgn0039959.1 1093 7974 +
Chr2	stalkie_big_nohaplotig	CDS	112543857	112544827	.	-	2	Parent=FBgn0039959.1.mrna1;Target=FBgn0039959.1 122 1092 +
Chr2	stalkie_big_nohaplotig	CDS	112544886	112544988	.	-	0	Parent=FBgn0039959.1.mrna1;Target=FBgn0039959.1 19 121 +
Chr2	stalkie_big_nohaplotig	CDS	112545041	112545058	.	-	0	Parent=FBgn0039959.1.mrna1;Target=FBgn0039959.1 1 18 +
Chr2	gffcl	locus	112545755	112551861	.	+	.	ID=RLOC_00020719;geneIDs=comp153298_c0_seq1.path1;transcripts=comp153298_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112545755	112551861	.	+	.	ID=comp153298_c0_seq1.mrna1;geneID=comp153298_c0_seq1.path1;Name=comp153298_c0_seq1;Dir=sensecoverage=79.3;identity=99.8;matches=1650;mismatches=4;indels=0;unknowns=0;locus=RLOC_00020719
Chr2	stalkie_big_nohaplotig	exon	112545755	112546095	98	+	.	Parent=comp153298_c0_seq1.mrna1;Target=comp153298_c0_seq1 433 773 +
Chr2	stalkie_big_nohaplotig	exon	112550496	112550849	100	+	.	Parent=comp153298_c0_seq1.mrna1;Target=comp153298_c0_seq1 774 1127 +
Chr2	stalkie_big_nohaplotig	exon	112550903	112551861	100	+	.	Parent=comp153298_c0_seq1.mrna1;Target=comp153298_c0_seq1 1128 2086 +
Chr2	stalkie_big_nohaplotig	CDS	112550733	112550849	.	+	0	Parent=comp153298_c0_seq1.mrna1;Target=comp153298_c0_seq1 1011 1127 +
Chr2	stalkie_big_nohaplotig	CDS	112550903	112551280	.	+	0	Parent=comp153298_c0_seq1.mrna1;Target=comp153298_c0_seq1 1128 1505 +
Chr2	gffcl	locus	112547151	112549297	.	-	.	ID=RLOC_00020720;geneIDs=comp143673_c0_seq1.path1,comp158486_c2_seq1.path1;transcripts=comp143673_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112548058	112549297	.	-	.	ID=comp143673_c0_seq1.mrna1;geneID=comp143673_c0_seq1.path1;Name=comp143673_c0_seq1;Dir=sensecoverage=100.0;identity=96.5;matches=1066;mismatches=2;indels=37;unknowns=0;locus=RLOC_00020720
Chr2	stalkie_big_nohaplotig	exon	112548058	112548872	95	-	.	Parent=comp143673_c0_seq1.mrna1;Target=comp143673_c0_seq1 254 1105 +
Chr2	stalkie_big_nohaplotig	exon	112549045	112549297	100	-	.	Parent=comp143673_c0_seq1.mrna1;Target=comp143673_c0_seq1 1 253 +
Chr2	stalkie_big_nohaplotig	CDS	112548742	112548872	.	-	2	Parent=comp143673_c0_seq1.mrna1;Target=comp143673_c0_seq1 254 384 +
Chr2	stalkie_big_nohaplotig	CDS	112549045	112549138	.	-	0	Parent=comp143673_c0_seq1.mrna1;Target=comp143673_c0_seq1 160 253 +
Chr2	gffcl	locus	112556663	112559115	.	+	.	ID=RLOC_00020721;geneIDs=FBgn0045866.1.path1;transcripts=FBgn0045866.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112556663	112559115	.	+	.	ID=FBgn0045866.1.mrna1;geneID=FBgn0045866.1.path1;Name=FBgn0045866.1;Dir=sensecoverage=100.0;identity=100.0;matches=672;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020721
Chr2	stalkie_big_nohaplotig	exon	112556663	112556896	100	+	.	Parent=FBgn0045866.1.mrna1;Target=FBgn0045866.1 1 234 +
Chr2	stalkie_big_nohaplotig	exon	112556950	112557070	100	+	.	Parent=FBgn0045866.1.mrna1;Target=FBgn0045866.1 235 355 +
Chr2	stalkie_big_nohaplotig	exon	112557468	112557538	100	+	.	Parent=FBgn0045866.1.mrna1;Target=FBgn0045866.1 356 426 +
Chr2	stalkie_big_nohaplotig	exon	112558803	112558929	100	+	.	Parent=FBgn0045866.1.mrna1;Target=FBgn0045866.1 427 553 +
Chr2	stalkie_big_nohaplotig	exon	112558997	112559115	100	+	.	Parent=FBgn0045866.1.mrna1;Target=FBgn0045866.1 554 672 +
Chr2	stalkie_big_nohaplotig	CDS	112556663	112556896	.	+	0	Parent=FBgn0045866.1.mrna1;Target=FBgn0045866.1 1 234 +
Chr2	stalkie_big_nohaplotig	CDS	112556950	112557070	.	+	0	Parent=FBgn0045866.1.mrna1;Target=FBgn0045866.1 235 355 +
Chr2	stalkie_big_nohaplotig	CDS	112557468	112557538	.	+	2	Parent=FBgn0045866.1.mrna1;Target=FBgn0045866.1 356 426 +
Chr2	stalkie_big_nohaplotig	CDS	112558803	112558929	.	+	0	Parent=FBgn0045866.1.mrna1;Target=FBgn0045866.1 427 553 +
Chr2	stalkie_big_nohaplotig	CDS	112558997	112559115	.	+	2	Parent=FBgn0045866.1.mrna1;Target=FBgn0045866.1 554 672 +
Chr2	gffcl	locus	112560938	112569472	.	-	.	ID=RLOC_00020722;geneIDs=FBgn0259178.1.path1,comp162233_c0_seq1.path1;transcripts=FBgn0259178.1.mrna1,comp162233_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112560938	112569390	.	-	.	ID=FBgn0259178.1.mrna1;geneID=FBgn0259178.1.path1;Name=FBgn0259178.1;Dir=sensecoverage=100.0;identity=100.0;matches=1521;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020722
Chr2	stalkie_big_nohaplotig	exon	112560938	112561194	100	-	.	Parent=FBgn0259178.1.mrna1;Target=FBgn0259178.1 1265 1521 +
Chr2	stalkie_big_nohaplotig	exon	112565254	112565290	100	-	.	Parent=FBgn0259178.1.mrna1;Target=FBgn0259178.1 1228 1264 +
Chr2	stalkie_big_nohaplotig	exon	112566758	112567006	100	-	.	Parent=FBgn0259178.1.mrna1;Target=FBgn0259178.1 979 1227 +
Chr2	stalkie_big_nohaplotig	exon	112567060	112567215	100	-	.	Parent=FBgn0259178.1.mrna1;Target=FBgn0259178.1 823 978 +
Chr2	stalkie_big_nohaplotig	exon	112567280	112567367	100	-	.	Parent=FBgn0259178.1.mrna1;Target=FBgn0259178.1 735 822 +
Chr2	stalkie_big_nohaplotig	exon	112567427	112567599	100	-	.	Parent=FBgn0259178.1.mrna1;Target=FBgn0259178.1 562 734 +
Chr2	stalkie_big_nohaplotig	exon	112567660	112567827	100	-	.	Parent=FBgn0259178.1.mrna1;Target=FBgn0259178.1 394 561 +
Chr2	stalkie_big_nohaplotig	exon	112568881	112569111	100	-	.	Parent=FBgn0259178.1.mrna1;Target=FBgn0259178.1 163 393 +
Chr2	stalkie_big_nohaplotig	exon	112569166	112569309	100	-	.	Parent=FBgn0259178.1.mrna1;Target=FBgn0259178.1 19 162 +
Chr2	stalkie_big_nohaplotig	exon	112569373	112569390	100	-	.	Parent=FBgn0259178.1.mrna1;Target=FBgn0259178.1 1 18 +
Chr2	stalkie_big_nohaplotig	CDS	112560938	112561194	.	-	2	Parent=FBgn0259178.1.mrna1;Target=FBgn0259178.1 1265 1521 +
Chr2	stalkie_big_nohaplotig	CDS	112565254	112565290	.	-	0	Parent=FBgn0259178.1.mrna1;Target=FBgn0259178.1 1228 1264 +
Chr2	stalkie_big_nohaplotig	CDS	112566758	112567006	.	-	0	Parent=FBgn0259178.1.mrna1;Target=FBgn0259178.1 979 1227 +
Chr2	stalkie_big_nohaplotig	CDS	112567060	112567215	.	-	0	Parent=FBgn0259178.1.mrna1;Target=FBgn0259178.1 823 978 +
Chr2	stalkie_big_nohaplotig	CDS	112567280	112567367	.	-	1	Parent=FBgn0259178.1.mrna1;Target=FBgn0259178.1 735 822 +
Chr2	stalkie_big_nohaplotig	CDS	112567427	112567599	.	-	0	Parent=FBgn0259178.1.mrna1;Target=FBgn0259178.1 562 734 +
Chr2	stalkie_big_nohaplotig	CDS	112567660	112567827	.	-	0	Parent=FBgn0259178.1.mrna1;Target=FBgn0259178.1 394 561 +
Chr2	stalkie_big_nohaplotig	CDS	112568881	112569111	.	-	0	Parent=FBgn0259178.1.mrna1;Target=FBgn0259178.1 163 393 +
Chr2	stalkie_big_nohaplotig	CDS	112569166	112569309	.	-	0	Parent=FBgn0259178.1.mrna1;Target=FBgn0259178.1 19 162 +
Chr2	stalkie_big_nohaplotig	CDS	112569373	112569390	.	-	0	Parent=FBgn0259178.1.mrna1;Target=FBgn0259178.1 1 18 +
Chr2	stalkie_big_nohaplotig	mRNA	112563429	112569472	.	-	.	ID=comp162233_c0_seq1.mrna1;geneID=comp162233_c0_seq1.path1;Name=comp162233_c0_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=3169;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020722
Chr2	stalkie_big_nohaplotig	exon	112563429	112565290	99	-	.	Parent=comp162233_c0_seq1.mrna1;Target=comp162233_c0_seq1 1 1862 -
Chr2	stalkie_big_nohaplotig	exon	112566758	112567006	100	-	.	Parent=comp162233_c0_seq1.mrna1;Target=comp162233_c0_seq1 1863 2111 -
Chr2	stalkie_big_nohaplotig	exon	112567060	112567215	100	-	.	Parent=comp162233_c0_seq1.mrna1;Target=comp162233_c0_seq1 2112 2267 -
Chr2	stalkie_big_nohaplotig	exon	112567280	112567367	100	-	.	Parent=comp162233_c0_seq1.mrna1;Target=comp162233_c0_seq1 2268 2355 -
Chr2	stalkie_big_nohaplotig	exon	112567427	112567599	100	-	.	Parent=comp162233_c0_seq1.mrna1;Target=comp162233_c0_seq1 2356 2528 -
Chr2	stalkie_big_nohaplotig	exon	112567660	112567827	100	-	.	Parent=comp162233_c0_seq1.mrna1;Target=comp162233_c0_seq1 2529 2696 -
Chr2	stalkie_big_nohaplotig	exon	112568881	112569111	100	-	.	Parent=comp162233_c0_seq1.mrna1;Target=comp162233_c0_seq1 2697 2927 -
Chr2	stalkie_big_nohaplotig	exon	112569166	112569309	100	-	.	Parent=comp162233_c0_seq1.mrna1;Target=comp162233_c0_seq1 2928 3071 -
Chr2	stalkie_big_nohaplotig	exon	112569373	112569472	100	-	.	Parent=comp162233_c0_seq1.mrna1;Target=comp162233_c0_seq1 3072 3171 -
Chr2	stalkie_big_nohaplotig	CDS	112565141	112565290	.	-	0	Parent=comp162233_c0_seq1.mrna1;Target=comp162233_c0_seq1 1713 1862 .
Chr2	stalkie_big_nohaplotig	CDS	112566758	112567006	.	-	0	Parent=comp162233_c0_seq1.mrna1;Target=comp162233_c0_seq1 1863 2111 .
Chr2	stalkie_big_nohaplotig	CDS	112567060	112567215	.	-	0	Parent=comp162233_c0_seq1.mrna1;Target=comp162233_c0_seq1 2112 2267 .
Chr2	stalkie_big_nohaplotig	CDS	112567280	112567367	.	-	1	Parent=comp162233_c0_seq1.mrna1;Target=comp162233_c0_seq1 2268 2355 .
Chr2	stalkie_big_nohaplotig	CDS	112567427	112567599	.	-	0	Parent=comp162233_c0_seq1.mrna1;Target=comp162233_c0_seq1 2356 2528 .
Chr2	stalkie_big_nohaplotig	CDS	112567660	112567827	.	-	0	Parent=comp162233_c0_seq1.mrna1;Target=comp162233_c0_seq1 2529 2696 .
Chr2	stalkie_big_nohaplotig	CDS	112568881	112569111	.	-	0	Parent=comp162233_c0_seq1.mrna1;Target=comp162233_c0_seq1 2697 2927 .
Chr2	stalkie_big_nohaplotig	CDS	112569166	112569276	.	-	0	Parent=comp162233_c0_seq1.mrna1;Target=comp162233_c0_seq1 2928 3038 .
Chr2	gffcl	locus	112565639	112566182	.	-	.	ID=RLOC_00020723;geneIDs=comp149275_c0_seq1.path1;transcripts=comp149275_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112565639	112566182	.	-	.	ID=comp149275_c0_seq1.mrna1;geneID=comp149275_c0_seq1.path1;Name=comp149275_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=541;mismatches=3;indels=3;unknowns=0;Target=comp149275_c0_seq1 547 1 .;CDS_Target=comp149275_c0_seq1 271 158 .;locus=RLOC_00020723
Chr2	stalkie_big_nohaplotig	exon	112565639	112566182	98	-	.	Parent=comp149275_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112565915	112566025	.	-	0	Parent=comp149275_c0_seq1.mrna1
Chr2	gffcl	locus	112575477	112586662	.	+	.	ID=RLOC_00020724;geneIDs=FBgn0020496.1.path1;transcripts=FBgn0020496.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112575477	112586662	.	+	.	ID=FBgn0020496.1.mrna1;geneID=FBgn0020496.1.path1;Name=FBgn0020496.1;Dir=sensecoverage=100.0;identity=100.0;matches=1398;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020724
Chr2	stalkie_big_nohaplotig	exon	112575477	112575686	100	+	.	Parent=FBgn0020496.1.mrna1;Target=FBgn0020496.1 1 210 +
Chr2	stalkie_big_nohaplotig	exon	112575869	112576174	100	+	.	Parent=FBgn0020496.1.mrna1;Target=FBgn0020496.1 211 516 +
Chr2	stalkie_big_nohaplotig	exon	112576246	112576506	100	+	.	Parent=FBgn0020496.1.mrna1;Target=FBgn0020496.1 517 777 +
Chr2	stalkie_big_nohaplotig	exon	112576569	112576709	100	+	.	Parent=FBgn0020496.1.mrna1;Target=FBgn0020496.1 778 918 +
Chr2	stalkie_big_nohaplotig	exon	112576795	112577017	100	+	.	Parent=FBgn0020496.1.mrna1;Target=FBgn0020496.1 919 1141 +
Chr2	stalkie_big_nohaplotig	exon	112582603	112582793	100	+	.	Parent=FBgn0020496.1.mrna1;Target=FBgn0020496.1 1142 1332 +
Chr2	stalkie_big_nohaplotig	exon	112586597	112586662	100	+	.	Parent=FBgn0020496.1.mrna1;Target=FBgn0020496.1 1333 1398 +
Chr2	stalkie_big_nohaplotig	CDS	112575477	112575686	.	+	0	Parent=FBgn0020496.1.mrna1;Target=FBgn0020496.1 1 210 +
Chr2	stalkie_big_nohaplotig	CDS	112575869	112576174	.	+	0	Parent=FBgn0020496.1.mrna1;Target=FBgn0020496.1 211 516 +
Chr2	stalkie_big_nohaplotig	CDS	112576246	112576506	.	+	0	Parent=FBgn0020496.1.mrna1;Target=FBgn0020496.1 517 777 +
Chr2	stalkie_big_nohaplotig	CDS	112576569	112576709	.	+	0	Parent=FBgn0020496.1.mrna1;Target=FBgn0020496.1 778 918 +
Chr2	stalkie_big_nohaplotig	CDS	112576795	112577017	.	+	0	Parent=FBgn0020496.1.mrna1;Target=FBgn0020496.1 919 1141 +
Chr2	stalkie_big_nohaplotig	CDS	112582603	112582793	.	+	2	Parent=FBgn0020496.1.mrna1;Target=FBgn0020496.1 1142 1332 +
Chr2	stalkie_big_nohaplotig	CDS	112586597	112586662	.	+	0	Parent=FBgn0020496.1.mrna1;Target=FBgn0020496.1 1333 1398 +
Chr2	gffcl	locus	112577521	112579118	.	-	.	ID=RLOC_00020725;geneIDs=comp55235_c0_seq1.path1;transcripts=comp55235_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112577521	112579118	.	-	.	ID=comp55235_c0_seq1.mrna1;geneID=comp55235_c0_seq1.path1;Name=comp55235_c0_seq1;Dir=indeterminatecoverage=97.1;identity=100.0;matches=1598;mismatches=0;indels=0;unknowns=0;Target=comp55235_c0_seq1 1598 1 .;CDS_Target=comp55235_c0_seq1 659 513 .;locus=RLOC_00020725
Chr2	stalkie_big_nohaplotig	exon	112577521	112579118	100	-	.	Parent=comp55235_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112578460	112578606	.	-	0	Parent=comp55235_c0_seq1.mrna1
Chr2	gffcl	locus	112581302	112582149	.	-	.	ID=RLOC_00020726;geneIDs=comp153397_c0_seq1.path1;transcripts=comp153397_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112581302	112582149	.	-	.	ID=comp153397_c0_seq1.mrna1;geneID=comp153397_c0_seq1.path1;Name=comp153397_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=846;mismatches=2;indels=0;unknowns=0;Target=comp153397_c0_seq1 848 1 .;CDS_Target=comp153397_c0_seq1 106 2 .;locus=RLOC_00020726
Chr2	stalkie_big_nohaplotig	exon	112581302	112582149	99	-	.	Parent=comp153397_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112582044	112582148	.	-	0	Parent=comp153397_c0_seq1.mrna1
Chr2	gffcl	locus	112584713	112585616	.	+	.	ID=RLOC_00020727;geneIDs=comp153942_c0_seq1.path1;transcripts=comp153942_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112584713	112585616	.	+	.	ID=comp153942_c0_seq1.mrna1;geneID=comp153942_c0_seq1.path1;Name=comp153942_c0_seq1;Dir=indeterminatecoverage=92.3;identity=99.8;matches=903;mismatches=1;indels=1;unknowns=0;Target=comp153942_c0_seq1 960 56 .;CDS_Target=comp153942_c0_seq1 188 147 .;locus=RLOC_00020727
Chr2	stalkie_big_nohaplotig	exon	112584713	112585616	99	+	.	Parent=comp153942_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112584803	112584844	.	+	0	Parent=comp153942_c0_seq1.mrna1
Chr2	gffcl	locus	112621576	112634650	.	-	.	ID=RLOC_00020728;geneIDs=FBgn0039232.1.path1;transcripts=FBgn0039232.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112621576	112634650	.	-	.	ID=FBgn0039232.1.mrna1;geneID=FBgn0039232.1.path1;Name=FBgn0039232.1;Dir=sensecoverage=100.0;identity=100.0;matches=573;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020728
Chr2	stalkie_big_nohaplotig	exon	112621576	112621664	100	-	.	Parent=FBgn0039232.1.mrna1;Target=FBgn0039232.1 485 573 +
Chr2	stalkie_big_nohaplotig	exon	112621726	112621902	100	-	.	Parent=FBgn0039232.1.mrna1;Target=FBgn0039232.1 308 484 +
Chr2	stalkie_big_nohaplotig	exon	112626705	112626851	100	-	.	Parent=FBgn0039232.1.mrna1;Target=FBgn0039232.1 161 307 +
Chr2	stalkie_big_nohaplotig	exon	112634491	112634650	100	-	.	Parent=FBgn0039232.1.mrna1;Target=FBgn0039232.1 1 160 +
Chr2	stalkie_big_nohaplotig	CDS	112621576	112621664	.	-	2	Parent=FBgn0039232.1.mrna1;Target=FBgn0039232.1 485 573 +
Chr2	stalkie_big_nohaplotig	CDS	112621726	112621902	.	-	2	Parent=FBgn0039232.1.mrna1;Target=FBgn0039232.1 308 484 +
Chr2	stalkie_big_nohaplotig	CDS	112626705	112626851	.	-	2	Parent=FBgn0039232.1.mrna1;Target=FBgn0039232.1 161 307 +
Chr2	stalkie_big_nohaplotig	CDS	112634491	112634650	.	-	0	Parent=FBgn0039232.1.mrna1;Target=FBgn0039232.1 1 160 +
Chr2	gffcl	locus	112640142	112641146	.	-	.	ID=RLOC_00020729;geneIDs=FBgn0024509.1.path1;transcripts=FBgn0024509.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112640142	112641146	.	-	.	ID=FBgn0024509.1.mrna1;geneID=FBgn0024509.1.path1;Name=FBgn0024509.1;Dir=sensecoverage=100.0;identity=100.0;matches=947;mismatches=0;indels=0;unknowns=1;locus=RLOC_00020729
Chr2	stalkie_big_nohaplotig	exon	112640142	112640799	100	-	.	Parent=FBgn0024509.1.mrna1;Target=FBgn0024509.1 291 948 +
Chr2	stalkie_big_nohaplotig	exon	112640857	112641146	100	-	.	Parent=FBgn0024509.1.mrna1;Target=FBgn0024509.1 1 290 +
Chr2	stalkie_big_nohaplotig	CDS	112640142	112640799	.	-	1	Parent=FBgn0024509.1.mrna1;Target=FBgn0024509.1 291 948 +
Chr2	stalkie_big_nohaplotig	CDS	112640857	112641146	.	-	0	Parent=FBgn0024509.1.mrna1;Target=FBgn0024509.1 1 290 +
Chr2	gffcl	locus	112641592	112648683	.	+	.	ID=RLOC_00020730;geneIDs=FBgn0264326.1.path1,comp162727_c1_seq1.path1;transcripts=FBgn0264326.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112641592	112648621	.	+	.	ID=FBgn0264326.1.mrna1;geneID=FBgn0264326.1.path1;Name=FBgn0264326.1;Dir=sensecoverage=100.0;identity=99.9;matches=6716;mismatches=4;indels=0;unknowns=0;locus=RLOC_00020730
Chr2	stalkie_big_nohaplotig	exon	112641592	112641692	100	+	.	Parent=FBgn0264326.1.mrna1;Target=FBgn0264326.1 1 101 +
Chr2	stalkie_big_nohaplotig	exon	112641752	112641878	98	+	.	Parent=FBgn0264326.1.mrna1;Target=FBgn0264326.1 102 228 +
Chr2	stalkie_big_nohaplotig	exon	112641932	112642954	100	+	.	Parent=FBgn0264326.1.mrna1;Target=FBgn0264326.1 229 1251 +
Chr2	stalkie_big_nohaplotig	exon	112643030	112643624	100	+	.	Parent=FBgn0264326.1.mrna1;Target=FBgn0264326.1 1252 1846 +
Chr2	stalkie_big_nohaplotig	exon	112643692	112648258	99	+	.	Parent=FBgn0264326.1.mrna1;Target=FBgn0264326.1 1847 6413 +
Chr2	stalkie_big_nohaplotig	exon	112648315	112648621	100	+	.	Parent=FBgn0264326.1.mrna1;Target=FBgn0264326.1 6414 6720 +
Chr2	stalkie_big_nohaplotig	CDS	112641592	112641692	.	+	0	Parent=FBgn0264326.1.mrna1;Target=FBgn0264326.1 1 101 +
Chr2	stalkie_big_nohaplotig	CDS	112641752	112641878	.	+	1	Parent=FBgn0264326.1.mrna1;Target=FBgn0264326.1 102 228 +
Chr2	stalkie_big_nohaplotig	CDS	112641932	112642954	.	+	0	Parent=FBgn0264326.1.mrna1;Target=FBgn0264326.1 229 1251 +
Chr2	stalkie_big_nohaplotig	CDS	112643030	112643624	.	+	0	Parent=FBgn0264326.1.mrna1;Target=FBgn0264326.1 1252 1846 +
Chr2	stalkie_big_nohaplotig	CDS	112643692	112648258	.	+	2	Parent=FBgn0264326.1.mrna1;Target=FBgn0264326.1 1847 6413 +
Chr2	stalkie_big_nohaplotig	CDS	112648315	112648621	.	+	1	Parent=FBgn0264326.1.mrna1;Target=FBgn0264326.1 6414 6720 +
Chr2	gffcl	locus	112648767	112649138	.	-	.	ID=RLOC_00020731;geneIDs=FBgn0016119.1.path1;transcripts=FBgn0016119.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112648767	112649138	.	-	.	ID=FBgn0016119.1.mrna1;geneID=FBgn0016119.1.path1;Name=FBgn0016119.1;Dir=sensecoverage=96.9;identity=100.0;matches=317;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020731
Chr2	stalkie_big_nohaplotig	exon	112648767	112648929	100	-	.	Parent=FBgn0016119.1.mrna1;Target=FBgn0016119.1 165 327 +
Chr2	stalkie_big_nohaplotig	exon	112648985	112649138	100	-	.	Parent=FBgn0016119.1.mrna1;Target=FBgn0016119.1 11 164 +
Chr2	stalkie_big_nohaplotig	CDS	112648767	112648929	.	-	1	Parent=FBgn0016119.1.mrna1;Target=FBgn0016119.1 165 327 +
Chr2	stalkie_big_nohaplotig	CDS	112648985	112649136	.	-	0	Parent=FBgn0016119.1.mrna1;Target=FBgn0016119.1 13 164 +
Chr2	gffcl	locus	112652547	112742292	.	+	.	ID=RLOC_00020732;geneIDs=FBgn0003118.1.path1;transcripts=FBgn0003118.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112652547	112742292	.	+	.	ID=FBgn0003118.1.mrna1;geneID=FBgn0003118.1.path1;Name=FBgn0003118.1;Dir=sensecoverage=100.0;identity=100.0;matches=2060;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020732
Chr2	stalkie_big_nohaplotig	exon	112652547	112652656	99	+	.	Parent=FBgn0003118.1.mrna1;Target=FBgn0003118.1 1 110 +
Chr2	stalkie_big_nohaplotig	exon	112654535	112654772	100	+	.	Parent=FBgn0003118.1.mrna1;Target=FBgn0003118.1 111 348 +
Chr2	stalkie_big_nohaplotig	exon	112660713	112660815	100	+	.	Parent=FBgn0003118.1.mrna1;Target=FBgn0003118.1 349 451 +
Chr2	stalkie_big_nohaplotig	exon	112702421	112702537	100	+	.	Parent=FBgn0003118.1.mrna1;Target=FBgn0003118.1 452 568 +
Chr2	stalkie_big_nohaplotig	exon	112703656	112703859	100	+	.	Parent=FBgn0003118.1.mrna1;Target=FBgn0003118.1 569 772 +
Chr2	stalkie_big_nohaplotig	exon	112705995	112706189	100	+	.	Parent=FBgn0003118.1.mrna1;Target=FBgn0003118.1 773 967 +
Chr2	stalkie_big_nohaplotig	exon	112741134	112742166	100	+	.	Parent=FBgn0003118.1.mrna1;Target=FBgn0003118.1 968 2000 +
Chr2	stalkie_big_nohaplotig	exon	112742232	112742292	100	+	.	Parent=FBgn0003118.1.mrna1;Target=FBgn0003118.1 2001 2061 +
Chr2	stalkie_big_nohaplotig	CDS	112652547	112652656	.	+	0	Parent=FBgn0003118.1.mrna1;Target=FBgn0003118.1 1 110 +
Chr2	stalkie_big_nohaplotig	CDS	112654535	112654772	.	+	1	Parent=FBgn0003118.1.mrna1;Target=FBgn0003118.1 111 348 +
Chr2	stalkie_big_nohaplotig	CDS	112660713	112660815	.	+	0	Parent=FBgn0003118.1.mrna1;Target=FBgn0003118.1 349 451 +
Chr2	stalkie_big_nohaplotig	CDS	112702421	112702537	.	+	2	Parent=FBgn0003118.1.mrna1;Target=FBgn0003118.1 452 568 +
Chr2	stalkie_big_nohaplotig	CDS	112703656	112703859	.	+	2	Parent=FBgn0003118.1.mrna1;Target=FBgn0003118.1 569 772 +
Chr2	stalkie_big_nohaplotig	CDS	112705995	112706189	.	+	2	Parent=FBgn0003118.1.mrna1;Target=FBgn0003118.1 773 967 +
Chr2	stalkie_big_nohaplotig	CDS	112741134	112742166	.	+	2	Parent=FBgn0003118.1.mrna1;Target=FBgn0003118.1 968 2000 +
Chr2	stalkie_big_nohaplotig	CDS	112742232	112742292	.	+	1	Parent=FBgn0003118.1.mrna1;Target=FBgn0003118.1 2001 2061 +
Chr2	gffcl	locus	112727368	112728325	.	-	.	ID=RLOC_00020733;geneIDs=comp149397_c0_seq1.path1;transcripts=comp149397_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112727368	112728325	.	-	.	ID=comp149397_c0_seq1.mrna1;geneID=comp149397_c0_seq1.path1;Name=comp149397_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=950;mismatches=5;indels=3;unknowns=0;Target=comp149397_c0_seq1 955 1 .;CDS_Target=comp149397_c0_seq1 168 1 .;locus=RLOC_00020733
Chr2	stalkie_big_nohaplotig	exon	112727368	112728325	99	-	.	Parent=comp149397_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112728158	112728325	.	-	0	Parent=comp149397_c0_seq1.mrna1
Chr2	gffcl	locus	112745446	112747462	.	-	.	ID=RLOC_00020734;geneIDs=FBgn0039069.1.path1;transcripts=FBgn0039069.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112745446	112747462	.	-	.	ID=FBgn0039069.1.mrna1;geneID=FBgn0039069.1.path1;Name=FBgn0039069.1;Dir=sensecoverage=100.0;identity=100.0;matches=1059;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020734
Chr2	stalkie_big_nohaplotig	exon	112745446	112745661	100	-	.	Parent=FBgn0039069.1.mrna1;Target=FBgn0039069.1 844 1059 +
Chr2	stalkie_big_nohaplotig	exon	112745730	112746136	100	-	.	Parent=FBgn0039069.1.mrna1;Target=FBgn0039069.1 437 843 +
Chr2	stalkie_big_nohaplotig	exon	112747027	112747462	100	-	.	Parent=FBgn0039069.1.mrna1;Target=FBgn0039069.1 1 436 +
Chr2	stalkie_big_nohaplotig	CDS	112745446	112745661	.	-	0	Parent=FBgn0039069.1.mrna1;Target=FBgn0039069.1 844 1059 +
Chr2	stalkie_big_nohaplotig	CDS	112745730	112746136	.	-	2	Parent=FBgn0039069.1.mrna1;Target=FBgn0039069.1 437 843 +
Chr2	stalkie_big_nohaplotig	CDS	112747027	112747462	.	-	0	Parent=FBgn0039069.1.mrna1;Target=FBgn0039069.1 1 436 +
Chr2	gffcl	locus	112750770	112751247	.	+	.	ID=RLOC_00020735;geneIDs=comp157122_c0_seq1.path9;transcripts=comp157122_c0_seq1.mrna9
Chr2	stalkie_big_nohaplotig	mRNA	112750770	112751247	.	+	.	ID=comp157122_c0_seq1.mrna9;geneID=comp157122_c0_seq1.path9;Name=comp157122_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=469;mismatches=9;indels=2;unknowns=0;Target=comp157122_c0_seq1 480 1 .;CDS_Target=comp157122_c0_seq1 480 244 .;locus=RLOC_00020735
Chr2	stalkie_big_nohaplotig	exon	112750770	112751247	97	+	.	Parent=comp157122_c0_seq1.mrna9
Chr2	stalkie_big_nohaplotig	CDS	112751011	112751247	.	+	0	Parent=comp157122_c0_seq1.mrna9
Chr2	gffcl	locus	112762885	112779155	.	+	.	ID=RLOC_00020737;geneIDs=FBgn0004882.1.path1;transcripts=FBgn0004882.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112762885	112779155	.	+	.	ID=FBgn0004882.1.mrna1;geneID=FBgn0004882.1.path1;Name=FBgn0004882.1;Dir=sensecoverage=100.0;identity=99.9;matches=1931;mismatches=0;indels=1;unknowns=0;locus=RLOC_00020737
Chr2	stalkie_big_nohaplotig	exon	112762885	112763070	100	+	.	Parent=FBgn0004882.1.mrna1;Target=FBgn0004882.1 1 186 +
Chr2	stalkie_big_nohaplotig	exon	112773455	112773611	100	+	.	Parent=FBgn0004882.1.mrna1;Target=FBgn0004882.1 187 343 +
Chr2	stalkie_big_nohaplotig	exon	112775051	112775223	100	+	.	Parent=FBgn0004882.1.mrna1;Target=FBgn0004882.1 344 516 +
Chr2	stalkie_big_nohaplotig	exon	112775588	112775721	100	+	.	Parent=FBgn0004882.1.mrna1;Target=FBgn0004882.1 517 650 +
Chr2	stalkie_big_nohaplotig	exon	112775816	112775984	100	+	.	Parent=FBgn0004882.1.mrna1;Target=FBgn0004882.1 651 819 +
Chr2	stalkie_big_nohaplotig	exon	112776052	112776303	100	+	.	Parent=FBgn0004882.1.mrna1;Target=FBgn0004882.1 820 1071 +
Chr2	stalkie_big_nohaplotig	exon	112776372	112776616	100	+	.	Parent=FBgn0004882.1.mrna1;Target=FBgn0004882.1 1072 1316 +
Chr2	stalkie_big_nohaplotig	exon	112776681	112776861	100	+	.	Parent=FBgn0004882.1.mrna1;Target=FBgn0004882.1 1317 1497 +
Chr2	stalkie_big_nohaplotig	exon	112776926	112777091	100	+	.	Parent=FBgn0004882.1.mrna1;Target=FBgn0004882.1 1498 1663 +
Chr2	stalkie_big_nohaplotig	exon	112778790	112779009	99	+	.	Parent=FBgn0004882.1.mrna1;Target=FBgn0004882.1 1664 1884 +
Chr2	stalkie_big_nohaplotig	exon	112779108	112779155	100	+	.	Parent=FBgn0004882.1.mrna1;Target=FBgn0004882.1 1885 1932 +
Chr2	stalkie_big_nohaplotig	CDS	112762885	112763070	.	+	0	Parent=FBgn0004882.1.mrna1;Target=FBgn0004882.1 1 186 +
Chr2	stalkie_big_nohaplotig	CDS	112773455	112773611	.	+	0	Parent=FBgn0004882.1.mrna1;Target=FBgn0004882.1 187 343 +
Chr2	stalkie_big_nohaplotig	CDS	112775051	112775223	.	+	2	Parent=FBgn0004882.1.mrna1;Target=FBgn0004882.1 344 516 +
Chr2	stalkie_big_nohaplotig	CDS	112775588	112775721	.	+	0	Parent=FBgn0004882.1.mrna1;Target=FBgn0004882.1 517 650 +
Chr2	stalkie_big_nohaplotig	CDS	112775816	112775984	.	+	1	Parent=FBgn0004882.1.mrna1;Target=FBgn0004882.1 651 819 +
Chr2	stalkie_big_nohaplotig	CDS	112776052	112776303	.	+	0	Parent=FBgn0004882.1.mrna1;Target=FBgn0004882.1 820 1071 +
Chr2	stalkie_big_nohaplotig	CDS	112776372	112776616	.	+	0	Parent=FBgn0004882.1.mrna1;Target=FBgn0004882.1 1072 1316 +
Chr2	stalkie_big_nohaplotig	CDS	112776681	112776861	.	+	1	Parent=FBgn0004882.1.mrna1;Target=FBgn0004882.1 1317 1497 +
Chr2	stalkie_big_nohaplotig	CDS	112776926	112777091	.	+	0	Parent=FBgn0004882.1.mrna1;Target=FBgn0004882.1 1498 1663 +
Chr2	stalkie_big_nohaplotig	CDS	112778790	112779009	.	+	2	Parent=FBgn0004882.1.mrna1;Target=FBgn0004882.1 1664 1884 +
Chr2	stalkie_big_nohaplotig	CDS	112779108	112779155	.	+	1	Parent=FBgn0004882.1.mrna1;Target=FBgn0004882.1 1885 1932 +
Chr2	gffcl	locus	112782229	112782532	.	+	.	ID=RLOC_00020738;geneIDs=comp1100958_c0_seq1.path1;transcripts=comp1100958_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112782229	112782532	.	+	.	ID=comp1100958_c0_seq1.mrna1;geneID=comp1100958_c0_seq1.path1;Name=comp1100958_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=304;mismatches=0;indels=0;unknowns=0;Target=comp1100958_c0_seq1 304 1 .;CDS_Target=comp1100958_c0_seq1 263 159 .;locus=RLOC_00020738
Chr2	stalkie_big_nohaplotig	exon	112782229	112782532	100	+	.	Parent=comp1100958_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112782387	112782491	.	+	0	Parent=comp1100958_c0_seq1.mrna1
Chr2	gffcl	locus	112782593	112783014	.	+	.	ID=RLOC_00020739;geneIDs=comp891214_c0_seq1.path1;transcripts=comp891214_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112782593	112783014	.	+	.	ID=comp891214_c0_seq1.mrna1;geneID=comp891214_c0_seq1.path1;Name=comp891214_c0_seq1;Dir=indeterminatecoverage=98.1;identity=100.0;matches=422;mismatches=0;indels=0;unknowns=0;Target=comp891214_c0_seq1 428 7 .;CDS_Target=comp891214_c0_seq1 99 7 .;locus=RLOC_00020739
Chr2	stalkie_big_nohaplotig	exon	112782593	112783014	100	+	.	Parent=comp891214_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112782593	112782685	.	+	0	Parent=comp891214_c0_seq1.mrna1
Chr2	gffcl	locus	112783879	112784201	.	-	.	ID=RLOC_00020740;geneIDs=comp100379_c0_seq1.path1;transcripts=comp100379_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112783879	112784201	.	-	.	ID=comp100379_c0_seq1.mrna1;geneID=comp100379_c0_seq1.path1;Name=comp100379_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=315;mismatches=8;indels=0;unknowns=0;Target=comp100379_c0_seq1 323 1 .;CDS_Target=comp100379_c0_seq1 139 50 .;locus=RLOC_00020740
Chr2	stalkie_big_nohaplotig	exon	112783879	112784201	97	-	.	Parent=comp100379_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112784063	112784152	.	-	0	Parent=comp100379_c0_seq1.mrna1
Chr2	gffcl	locus	112785301	112786564	.	-	.	ID=RLOC_00020741;geneIDs=comp154368_c0_seq1.path1;transcripts=comp154368_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112785301	112786564	.	-	.	ID=comp154368_c0_seq1.mrna1;geneID=comp154368_c0_seq1.path1;Name=comp154368_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.1;matches=1258;mismatches=6;indels=6;unknowns=0;Target=comp154368_c0_seq1 1286 17 .;CDS_Target=comp154368_c0_seq1 1227 1126 .;locus=RLOC_00020741
Chr2	stalkie_big_nohaplotig	exon	112785301	112786564	99	-	.	Parent=comp154368_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112785360	112785455	.	-	0	Parent=comp154368_c0_seq1.mrna1
Chr2	gffcl	locus	112788086	112791866	.	-	.	ID=RLOC_00020742;geneIDs=FBgn0039068.1.path1;transcripts=FBgn0039068.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112788086	112791866	.	-	.	ID=FBgn0039068.1.mrna1;geneID=FBgn0039068.1.path1;Name=FBgn0039068.1;Dir=sensecoverage=100.0;identity=100.0;matches=705;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020742
Chr2	stalkie_big_nohaplotig	exon	112788086	112788296	100	-	.	Parent=FBgn0039068.1.mrna1;Target=FBgn0039068.1 495 705 +
Chr2	stalkie_big_nohaplotig	exon	112788769	112788825	100	-	.	Parent=FBgn0039068.1.mrna1;Target=FBgn0039068.1 438 494 +
Chr2	stalkie_big_nohaplotig	exon	112788898	112789079	100	-	.	Parent=FBgn0039068.1.mrna1;Target=FBgn0039068.1 256 437 +
Chr2	stalkie_big_nohaplotig	exon	112789135	112789317	100	-	.	Parent=FBgn0039068.1.mrna1;Target=FBgn0039068.1 73 255 +
Chr2	stalkie_big_nohaplotig	exon	112791795	112791866	100	-	.	Parent=FBgn0039068.1.mrna1;Target=FBgn0039068.1 1 72 +
Chr2	stalkie_big_nohaplotig	CDS	112788086	112788296	.	-	1	Parent=FBgn0039068.1.mrna1;Target=FBgn0039068.1 495 705 +
Chr2	stalkie_big_nohaplotig	CDS	112788769	112788825	.	-	1	Parent=FBgn0039068.1.mrna1;Target=FBgn0039068.1 438 494 +
Chr2	stalkie_big_nohaplotig	CDS	112788898	112789079	.	-	0	Parent=FBgn0039068.1.mrna1;Target=FBgn0039068.1 256 437 +
Chr2	stalkie_big_nohaplotig	CDS	112789135	112789317	.	-	0	Parent=FBgn0039068.1.mrna1;Target=FBgn0039068.1 73 255 +
Chr2	stalkie_big_nohaplotig	CDS	112791795	112791866	.	-	0	Parent=FBgn0039068.1.mrna1;Target=FBgn0039068.1 1 72 +
Chr2	gffcl	locus	112794219	112797760	.	+	.	ID=RLOC_00020743;geneIDs=FBgn0039067.1.path1;transcripts=FBgn0039067.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112794219	112797760	.	+	.	ID=FBgn0039067.1.mrna1;geneID=FBgn0039067.1.path1;Name=FBgn0039067.1;Dir=sensecoverage=100.0;identity=100.0;matches=2165;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020743
Chr2	stalkie_big_nohaplotig	exon	112794219	112794347	100	+	.	Parent=FBgn0039067.1.mrna1;Target=FBgn0039067.1 1 129 +
Chr2	stalkie_big_nohaplotig	exon	112794407	112794573	100	+	.	Parent=FBgn0039067.1.mrna1;Target=FBgn0039067.1 130 296 +
Chr2	stalkie_big_nohaplotig	exon	112794630	112795451	99	+	.	Parent=FBgn0039067.1.mrna1;Target=FBgn0039067.1 297 1118 +
Chr2	stalkie_big_nohaplotig	exon	112795510	112795779	100	+	.	Parent=FBgn0039067.1.mrna1;Target=FBgn0039067.1 1119 1388 +
Chr2	stalkie_big_nohaplotig	exon	112795838	112796138	100	+	.	Parent=FBgn0039067.1.mrna1;Target=FBgn0039067.1 1389 1689 +
Chr2	stalkie_big_nohaplotig	exon	112796908	112797254	100	+	.	Parent=FBgn0039067.1.mrna1;Target=FBgn0039067.1 1690 2036 +
Chr2	stalkie_big_nohaplotig	exon	112797631	112797760	100	+	.	Parent=FBgn0039067.1.mrna1;Target=FBgn0039067.1 2037 2166 +
Chr2	stalkie_big_nohaplotig	CDS	112794219	112794347	.	+	0	Parent=FBgn0039067.1.mrna1;Target=FBgn0039067.1 1 129 +
Chr2	stalkie_big_nohaplotig	CDS	112794407	112794573	.	+	0	Parent=FBgn0039067.1.mrna1;Target=FBgn0039067.1 130 296 +
Chr2	stalkie_big_nohaplotig	CDS	112794630	112795451	.	+	1	Parent=FBgn0039067.1.mrna1;Target=FBgn0039067.1 297 1118 +
Chr2	stalkie_big_nohaplotig	CDS	112795510	112795779	.	+	1	Parent=FBgn0039067.1.mrna1;Target=FBgn0039067.1 1119 1388 +
Chr2	stalkie_big_nohaplotig	CDS	112795838	112796138	.	+	1	Parent=FBgn0039067.1.mrna1;Target=FBgn0039067.1 1389 1689 +
Chr2	stalkie_big_nohaplotig	CDS	112796908	112797254	.	+	0	Parent=FBgn0039067.1.mrna1;Target=FBgn0039067.1 1690 2036 +
Chr2	stalkie_big_nohaplotig	CDS	112797631	112797760	.	+	1	Parent=FBgn0039067.1.mrna1;Target=FBgn0039067.1 2037 2166 +
Chr2	gffcl	locus	112799798	112804129	.	-	.	ID=RLOC_00020744;geneIDs=FBgn0039066.1.path1;transcripts=FBgn0039066.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112799798	112804129	.	-	.	ID=FBgn0039066.1.mrna1;geneID=FBgn0039066.1.path1;Name=FBgn0039066.1;Dir=sensecoverage=100.0;identity=100.0;matches=2232;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020744
Chr2	stalkie_big_nohaplotig	exon	112799798	112799874	100	-	.	Parent=FBgn0039066.1.mrna1;Target=FBgn0039066.1 2156 2232 +
Chr2	stalkie_big_nohaplotig	exon	112799967	112800258	100	-	.	Parent=FBgn0039066.1.mrna1;Target=FBgn0039066.1 1864 2155 +
Chr2	stalkie_big_nohaplotig	exon	112800904	112801103	100	-	.	Parent=FBgn0039066.1.mrna1;Target=FBgn0039066.1 1664 1863 +
Chr2	stalkie_big_nohaplotig	exon	112801195	112801289	100	-	.	Parent=FBgn0039066.1.mrna1;Target=FBgn0039066.1 1569 1663 +
Chr2	stalkie_big_nohaplotig	exon	112801349	112801578	100	-	.	Parent=FBgn0039066.1.mrna1;Target=FBgn0039066.1 1339 1568 +
Chr2	stalkie_big_nohaplotig	exon	112801638	112802129	100	-	.	Parent=FBgn0039066.1.mrna1;Target=FBgn0039066.1 847 1338 +
Chr2	stalkie_big_nohaplotig	exon	112802193	112802951	100	-	.	Parent=FBgn0039066.1.mrna1;Target=FBgn0039066.1 88 846 +
Chr2	stalkie_big_nohaplotig	exon	112804043	112804129	100	-	.	Parent=FBgn0039066.1.mrna1;Target=FBgn0039066.1 1 87 +
Chr2	stalkie_big_nohaplotig	CDS	112799798	112799874	.	-	2	Parent=FBgn0039066.1.mrna1;Target=FBgn0039066.1 2156 2232 +
Chr2	stalkie_big_nohaplotig	CDS	112799967	112800258	.	-	0	Parent=FBgn0039066.1.mrna1;Target=FBgn0039066.1 1864 2155 +
Chr2	stalkie_big_nohaplotig	CDS	112800904	112801103	.	-	2	Parent=FBgn0039066.1.mrna1;Target=FBgn0039066.1 1664 1863 +
Chr2	stalkie_big_nohaplotig	CDS	112801195	112801289	.	-	1	Parent=FBgn0039066.1.mrna1;Target=FBgn0039066.1 1569 1663 +
Chr2	stalkie_big_nohaplotig	CDS	112801349	112801578	.	-	0	Parent=FBgn0039066.1.mrna1;Target=FBgn0039066.1 1339 1568 +
Chr2	stalkie_big_nohaplotig	CDS	112801638	112802129	.	-	0	Parent=FBgn0039066.1.mrna1;Target=FBgn0039066.1 847 1338 +
Chr2	stalkie_big_nohaplotig	CDS	112802193	112802951	.	-	0	Parent=FBgn0039066.1.mrna1;Target=FBgn0039066.1 88 846 +
Chr2	stalkie_big_nohaplotig	CDS	112804043	112804129	.	-	0	Parent=FBgn0039066.1.mrna1;Target=FBgn0039066.1 1 87 +
Chr2	stalkie_big_nohaplotig	mRNA	114499830	114501586	.	+	.	ID=FBgn0053095.1.mrna1;geneID=FBgn0053095.1.path1;Name=FBgn0053095.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1745;mismatches=12;indels=1;unknowns=0;Target=FBgn0053095.1 1758 1 .;CDS_Target=FBgn0053095.1 119 3 .;locus=RLOC_00020745
Chr2	stalkie_big_nohaplotig	exon	114499830	114501586	99	+	.	Parent=FBgn0053095.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114499832	114499947	.	+	0	Parent=FBgn0053095.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114507323	114509788	.	+	.	ID=FBgn0011770.1.mrna1;geneID=FBgn0011770.1.path1;Name=FBgn0011770.1;Dir=sensecoverage=100.0;identity=99.2;matches=836;mismatches=7;indels=0;unknowns=0;locus=RLOC_00020745
Chr2	stalkie_big_nohaplotig	exon	114507323	114507575	99	+	.	Parent=FBgn0011770.1.mrna1;Target=FBgn0011770.1 1 253 +
Chr2	stalkie_big_nohaplotig	exon	114507629	114507737	97	+	.	Parent=FBgn0011770.1.mrna1;Target=FBgn0011770.1 254 362 +
Chr2	stalkie_big_nohaplotig	exon	114509251	114509426	100	+	.	Parent=FBgn0011770.1.mrna1;Target=FBgn0011770.1 363 538 +
Chr2	stalkie_big_nohaplotig	exon	114509484	114509788	99	+	.	Parent=FBgn0011770.1.mrna1;Target=FBgn0011770.1 539 843 +
Chr2	stalkie_big_nohaplotig	CDS	114507323	114507575	.	+	0	Parent=FBgn0011770.1.mrna1;Target=FBgn0011770.1 1 253 +
Chr2	stalkie_big_nohaplotig	CDS	114507629	114507737	.	+	2	Parent=FBgn0011770.1.mrna1;Target=FBgn0011770.1 254 362 +
Chr2	stalkie_big_nohaplotig	CDS	114509251	114509426	.	+	1	Parent=FBgn0011770.1.mrna1;Target=FBgn0011770.1 363 538 +
Chr2	stalkie_big_nohaplotig	CDS	114509484	114509788	.	+	2	Parent=FBgn0011770.1.mrna1;Target=FBgn0011770.1 539 843 +
Chr2	gffcl	locus	112844662	112856971	.	+	.	ID=RLOC_00020746;geneIDs=FBgn0039064.1.path1;transcripts=FBgn0039064.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112844662	112856971	.	+	.	ID=FBgn0039064.1.mrna1;geneID=FBgn0039064.1.path1;Name=FBgn0039064.1;Dir=sensecoverage=100.0;identity=100.0;matches=3332;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020746
Chr2	stalkie_big_nohaplotig	exon	112844662	112844814	100	+	.	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 2 154 +
Chr2	stalkie_big_nohaplotig	exon	112844976	112845116	100	+	.	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 155 295 +
Chr2	stalkie_big_nohaplotig	exon	112852570	112852758	100	+	.	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 296 484 +
Chr2	stalkie_big_nohaplotig	exon	112852822	112852904	100	+	.	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 485 567 +
Chr2	stalkie_big_nohaplotig	exon	112852957	112853165	100	+	.	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 568 776 +
Chr2	stalkie_big_nohaplotig	exon	112853232	112853412	100	+	.	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 777 957 +
Chr2	stalkie_big_nohaplotig	exon	112853487	112854341	100	+	.	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 958 1812 +
Chr2	stalkie_big_nohaplotig	exon	112854400	112854558	100	+	.	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 1813 1971 +
Chr2	stalkie_big_nohaplotig	exon	112854615	112854921	100	+	.	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 1972 2278 +
Chr2	stalkie_big_nohaplotig	exon	112854982	112855124	100	+	.	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 2279 2421 +
Chr2	stalkie_big_nohaplotig	exon	112855200	112855462	100	+	.	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 2422 2684 +
Chr2	stalkie_big_nohaplotig	exon	112856192	112856321	100	+	.	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 2685 2814 +
Chr2	stalkie_big_nohaplotig	exon	112856389	112856760	100	+	.	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 2815 3186 +
Chr2	stalkie_big_nohaplotig	exon	112856825	112856971	100	+	.	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 3187 3333 +
Chr2	stalkie_big_nohaplotig	CDS	112844664	112844814	.	+	0	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 4 154 +
Chr2	stalkie_big_nohaplotig	CDS	112844976	112845116	.	+	2	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 155 295 +
Chr2	stalkie_big_nohaplotig	CDS	112852570	112852758	.	+	2	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 296 484 +
Chr2	stalkie_big_nohaplotig	CDS	112852822	112852904	.	+	2	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 485 567 +
Chr2	stalkie_big_nohaplotig	CDS	112852957	112853165	.	+	0	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 568 776 +
Chr2	stalkie_big_nohaplotig	CDS	112853232	112853412	.	+	1	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 777 957 +
Chr2	stalkie_big_nohaplotig	CDS	112853487	112854341	.	+	0	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 958 1812 +
Chr2	stalkie_big_nohaplotig	CDS	112854400	112854558	.	+	0	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 1813 1971 +
Chr2	stalkie_big_nohaplotig	CDS	112854615	112854921	.	+	0	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 1972 2278 +
Chr2	stalkie_big_nohaplotig	CDS	112854982	112855124	.	+	2	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 2279 2421 +
Chr2	stalkie_big_nohaplotig	CDS	112855200	112855462	.	+	0	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 2422 2684 +
Chr2	stalkie_big_nohaplotig	CDS	112856192	112856321	.	+	1	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 2685 2814 +
Chr2	stalkie_big_nohaplotig	CDS	112856389	112856760	.	+	0	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 2815 3186 +
Chr2	stalkie_big_nohaplotig	CDS	112856825	112856971	.	+	0	Parent=FBgn0039064.1.mrna1;Target=FBgn0039064.1 3187 3333 +
Chr2	gffcl	locus	112844904	112951988	.	.	.	ID=RLOC_00020747;geneIDs=comp150974_c0_seq1.path1,comp150974_c0_seq1.path2;transcripts=comp150974_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112844904	112951988	.	-	.	ID=comp150974_c0_seq1.mrna1;geneID=comp150974_c0_seq1.path1;Name=comp150974_c0_seq1;Dir=indeterminatecoverage=62.4;identity=95.6;matches=1030;mismatches=28;indels=19;unknowns=0;Target=comp150974_c0_seq1 139 2 .;locus=RLOC_00020747
Chr2	stalkie_big_nohaplotig	exon	112844904	112844950	47	-	.	Parent=comp150974_c0_seq1.mrna1;Target=comp150974_c0_seq1 1077 1023 .
Chr2	stalkie_big_nohaplotig	exon	112848309	112848315	100	-	.	Parent=comp150974_c0_seq1.mrna1;Target=comp150974_c0_seq1 1022 1016 .
Chr2	stalkie_big_nohaplotig	exon	112856009	112856017	100	-	.	Parent=comp150974_c0_seq1.mrna1;Target=comp150974_c0_seq1 1015 1007 .
Chr2	stalkie_big_nohaplotig	exon	112857578	112857598	43	-	.	Parent=comp150974_c0_seq1.mrna1;Target=comp150974_c0_seq1 1006 975 .
Chr2	stalkie_big_nohaplotig	exon	112858038	112858048	100	-	.	Parent=comp150974_c0_seq1.mrna1;Target=comp150974_c0_seq1 974 964 .
Chr2	stalkie_big_nohaplotig	exon	112866106	112866108	100	-	.	Parent=comp150974_c0_seq1.mrna1;Target=comp150974_c0_seq1 963 961 .
Chr2	stalkie_big_nohaplotig	exon	112870961	112870969	100	-	.	Parent=comp150974_c0_seq1.mrna1;Target=comp150974_c0_seq1 960 952 .
Chr2	stalkie_big_nohaplotig	exon	112872780	112872786	100	-	.	Parent=comp150974_c0_seq1.mrna1;Target=comp150974_c0_seq1 951 945 .
Chr2	stalkie_big_nohaplotig	exon	112893035	112893036	100	-	.	Parent=comp150974_c0_seq1.mrna1;Target=comp150974_c0_seq1 944 943 .
Chr2	stalkie_big_nohaplotig	exon	112895814	112895818	100	-	.	Parent=comp150974_c0_seq1.mrna1;Target=comp150974_c0_seq1 942 938 .
Chr2	stalkie_big_nohaplotig	exon	112910346	112910350	100	-	.	Parent=comp150974_c0_seq1.mrna1;Target=comp150974_c0_seq1 937 933 .
Chr2	stalkie_big_nohaplotig	exon	112951057	112951988	100	-	.	Parent=comp150974_c0_seq1.mrna1;Target=comp150974_c0_seq1 932 1 .
Chr2	stalkie_big_nohaplotig	CDS	112951850	112951987	.	-	0	Parent=comp150974_c0_seq1.mrna1
Chr2	gffcl	locus	112861272	112861511	.	-	.	ID=RLOC_00020748;geneIDs=comp143167_c0_seq1.path1;transcripts=comp143167_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112861272	112861511	.	-	.	ID=comp143167_c0_seq1.mrna1;geneID=comp143167_c0_seq1.path1;Name=comp143167_c0_seq1;Dir=indeterminatecoverage=83.6;identity=98.3;matches=236;mismatches=4;indels=0;unknowns=0;Target=comp143167_c0_seq1 267 28 .;CDS_Target=comp143167_c0_seq1 199 119 .;locus=RLOC_00020748
Chr2	stalkie_big_nohaplotig	exon	112861272	112861511	98	-	.	Parent=comp143167_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112861340	112861420	.	-	0	Parent=comp143167_c0_seq1.mrna1
Chr2	gffcl	locus	112861864	112862991	.	+	.	ID=RLOC_00020749;geneIDs=comp153649_c0_seq1.path1;transcripts=comp153649_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112861864	112862991	.	+	.	ID=comp153649_c0_seq1.mrna1;geneID=comp153649_c0_seq1.path1;Name=comp153649_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1127;mismatches=0;indels=5;unknowns=0;Target=comp153649_c0_seq1 1131 1 .;CDS_Target=comp153649_c0_seq1 936 862 .;locus=RLOC_00020749
Chr2	stalkie_big_nohaplotig	exon	112861864	112862991	99	+	.	Parent=comp153649_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	112862725	112862799	.	+	0	Parent=comp153649_c0_seq1.mrna1
Chr2	gffcl	locus	112906578	112950195	.	+	.	ID=RLOC_00020750;geneIDs=FBgn0262975.1.path1;transcripts=FBgn0262975.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112906578	112950195	.	+	.	ID=FBgn0262975.1.mrna1;geneID=FBgn0262975.1.path1;Name=FBgn0262975.1;Dir=sensecoverage=74.3;identity=100.0;matches=2862;mismatches=0;indels=0;unknowns=1;locus=RLOC_00020750
Chr2	stalkie_big_nohaplotig	exon	112906578	112906772	100	+	.	Parent=FBgn0262975.1.mrna1;Target=FBgn0262975.1 133 327 +
Chr2	stalkie_big_nohaplotig	exon	112908687	112908774	100	+	.	Parent=FBgn0262975.1.mrna1;Target=FBgn0262975.1 328 415 +
Chr2	stalkie_big_nohaplotig	exon	112928452	112928531	100	+	.	Parent=FBgn0262975.1.mrna1;Target=FBgn0262975.1 416 495 +
Chr2	stalkie_big_nohaplotig	exon	112929277	112929726	100	+	.	Parent=FBgn0262975.1.mrna1;Target=FBgn0262975.1 496 945 +
Chr2	stalkie_big_nohaplotig	exon	112942764	112943186	100	+	.	Parent=FBgn0262975.1.mrna1;Target=FBgn0262975.1 946 1368 +
Chr2	stalkie_big_nohaplotig	exon	112943266	112943362	100	+	.	Parent=FBgn0262975.1.mrna1;Target=FBgn0262975.1 1369 1465 +
Chr2	stalkie_big_nohaplotig	exon	112948577	112949772	100	+	.	Parent=FBgn0262975.1.mrna1;Target=FBgn0262975.1 1466 2661 +
Chr2	stalkie_big_nohaplotig	exon	112949862	112950195	100	+	.	Parent=FBgn0262975.1.mrna1;Target=FBgn0262975.1 2662 2995 +
Chr2	stalkie_big_nohaplotig	CDS	112906578	112906772	.	+	0	Parent=FBgn0262975.1.mrna1;Target=FBgn0262975.1 133 327 +
Chr2	stalkie_big_nohaplotig	CDS	112908687	112908774	.	+	0	Parent=FBgn0262975.1.mrna1;Target=FBgn0262975.1 328 415 +
Chr2	stalkie_big_nohaplotig	CDS	112928452	112928531	.	+	2	Parent=FBgn0262975.1.mrna1;Target=FBgn0262975.1 416 495 +
Chr2	stalkie_big_nohaplotig	CDS	112929277	112929726	.	+	0	Parent=FBgn0262975.1.mrna1;Target=FBgn0262975.1 496 945 +
Chr2	stalkie_big_nohaplotig	CDS	112942764	112943186	.	+	0	Parent=FBgn0262975.1.mrna1;Target=FBgn0262975.1 946 1368 +
Chr2	stalkie_big_nohaplotig	CDS	112943266	112943362	.	+	0	Parent=FBgn0262975.1.mrna1;Target=FBgn0262975.1 1369 1465 +
Chr2	stalkie_big_nohaplotig	CDS	112948577	112949772	.	+	2	Parent=FBgn0262975.1.mrna1;Target=FBgn0262975.1 1466 2661 +
Chr2	stalkie_big_nohaplotig	CDS	112949862	112950194	.	+	0	Parent=FBgn0262975.1.mrna1;Target=FBgn0262975.1 2662 2994 +
Chr2	gffcl	locus	112953233	112954199	.	-	.	ID=RLOC_00020751;geneIDs=FBgn0038805.1.path1;transcripts=FBgn0038805.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112953233	112954199	.	-	.	ID=FBgn0038805.1.mrna1;geneID=FBgn0038805.1.path1;Name=FBgn0038805.1;Dir=sensecoverage=100.0;identity=99.7;matches=778;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020751
Chr2	stalkie_big_nohaplotig	exon	112953233	112953338	100	-	.	Parent=FBgn0038805.1.mrna1;Target=FBgn0038805.1 675 780 +
Chr2	stalkie_big_nohaplotig	exon	112953400	112953975	99	-	.	Parent=FBgn0038805.1.mrna1;Target=FBgn0038805.1 99 674 +
Chr2	stalkie_big_nohaplotig	exon	112954102	112954199	100	-	.	Parent=FBgn0038805.1.mrna1;Target=FBgn0038805.1 1 98 +
Chr2	stalkie_big_nohaplotig	CDS	112953233	112953338	.	-	1	Parent=FBgn0038805.1.mrna1;Target=FBgn0038805.1 675 780 +
Chr2	stalkie_big_nohaplotig	CDS	112953400	112953975	.	-	1	Parent=FBgn0038805.1.mrna1;Target=FBgn0038805.1 99 674 +
Chr2	stalkie_big_nohaplotig	CDS	112954102	112954199	.	-	0	Parent=FBgn0038805.1.mrna1;Target=FBgn0038805.1 1 98 +
Chr2	gffcl	locus	112954549	112955485	.	+	.	ID=RLOC_00020752;geneIDs=FBgn0038806.1.path1;transcripts=FBgn0038806.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112954549	112955485	.	+	.	ID=FBgn0038806.1.mrna1;geneID=FBgn0038806.1.path1;Name=FBgn0038806.1;Dir=sensecoverage=100.0;identity=100.0;matches=882;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020752
Chr2	stalkie_big_nohaplotig	exon	112954549	112955053	100	+	.	Parent=FBgn0038806.1.mrna1;Target=FBgn0038806.1 1 505 +
Chr2	stalkie_big_nohaplotig	exon	112955109	112955485	100	+	.	Parent=FBgn0038806.1.mrna1;Target=FBgn0038806.1 506 882 +
Chr2	stalkie_big_nohaplotig	CDS	112954549	112955053	.	+	0	Parent=FBgn0038806.1.mrna1;Target=FBgn0038806.1 1 505 +
Chr2	stalkie_big_nohaplotig	CDS	112955109	112955485	.	+	2	Parent=FBgn0038806.1.mrna1;Target=FBgn0038806.1 506 882 +
Chr2	gffcl	locus	112956131	112957093	.	-	.	ID=RLOC_00020753;geneIDs=FBgn0023212.1.path1;transcripts=FBgn0023212.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112956131	112957093	.	-	.	ID=FBgn0023212.1.mrna1;geneID=FBgn0023212.1.path1;Name=FBgn0023212.1;Dir=sensecoverage=100.0;identity=99.7;matches=335;mismatches=0;indels=1;unknowns=0;Target=FBgn0023212.1 3 77 +;locus=RLOC_00020753
Chr2	stalkie_big_nohaplotig	exon	112956131	112956242	100	-	.	Parent=FBgn0023212.1.mrna1;Target=FBgn0023212.1 225 336 +
Chr2	stalkie_big_nohaplotig	exon	112956802	112956946	100	-	.	Parent=FBgn0023212.1.mrna1;Target=FBgn0023212.1 80 224 +
Chr2	stalkie_big_nohaplotig	exon	112957016	112957093	98	-	.	Parent=FBgn0023212.1.mrna1;Target=FBgn0023212.1 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	112957018	112957091	.	-	0	Parent=FBgn0023212.1.mrna1
Chr2	gffcl	locus	112977778	113087319	.	+	.	ID=RLOC_00020754;geneIDs=FBgn0038118.1.path1;transcripts=FBgn0038118.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	112977778	113087319	.	+	.	ID=FBgn0038118.1.mrna1;geneID=FBgn0038118.1.path1;Name=FBgn0038118.1;Dir=sensecoverage=100.0;identity=99.9;matches=3616;mismatches=4;indels=1;unknowns=0;locus=RLOC_00020754
Chr2	stalkie_big_nohaplotig	exon	112977778	112977882	100	+	.	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 1 105 +
Chr2	stalkie_big_nohaplotig	exon	112977945	112978268	100	+	.	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 106 429 +
Chr2	stalkie_big_nohaplotig	exon	112982759	112983016	100	+	.	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 430 687 +
Chr2	stalkie_big_nohaplotig	exon	112983217	112983536	100	+	.	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 688 1007 +
Chr2	stalkie_big_nohaplotig	exon	112990929	112991114	100	+	.	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 1008 1193 +
Chr2	stalkie_big_nohaplotig	exon	112994454	112994577	100	+	.	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 1194 1317 +
Chr2	stalkie_big_nohaplotig	exon	112997474	112997637	100	+	.	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 1318 1481 +
Chr2	stalkie_big_nohaplotig	exon	113005449	113005599	97	+	.	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 1482 1632 +
Chr2	stalkie_big_nohaplotig	exon	113007282	113007415	100	+	.	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 1633 1766 +
Chr2	stalkie_big_nohaplotig	exon	113007472	113007552	100	+	.	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 1767 1847 +
Chr2	stalkie_big_nohaplotig	exon	113018426	113018526	100	+	.	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 1848 1948 +
Chr2	stalkie_big_nohaplotig	exon	113079040	113079123	100	+	.	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 1949 2032 +
Chr2	stalkie_big_nohaplotig	exon	113079179	113079227	100	+	.	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 2033 2081 +
Chr2	stalkie_big_nohaplotig	exon	113082816	113082957	100	+	.	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 2082 2223 +
Chr2	stalkie_big_nohaplotig	exon	113083248	113083453	100	+	.	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 2224 2429 +
Chr2	stalkie_big_nohaplotig	exon	113083655	113083743	100	+	.	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 2430 2518 +
Chr2	stalkie_big_nohaplotig	exon	113086153	113086356	100	+	.	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 2519 2722 +
Chr2	stalkie_big_nohaplotig	exon	113086422	113087319	99	+	.	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 2723 3621 +
Chr2	stalkie_big_nohaplotig	CDS	112977778	112977882	.	+	0	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	112977945	112978268	.	+	0	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 106 429 +
Chr2	stalkie_big_nohaplotig	CDS	112982759	112983016	.	+	0	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 430 687 +
Chr2	stalkie_big_nohaplotig	CDS	112983217	112983536	.	+	0	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 688 1007 +
Chr2	stalkie_big_nohaplotig	CDS	112990929	112991114	.	+	1	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 1008 1193 +
Chr2	stalkie_big_nohaplotig	CDS	112994454	112994577	.	+	1	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 1194 1317 +
Chr2	stalkie_big_nohaplotig	CDS	112997474	112997637	.	+	0	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 1318 1481 +
Chr2	stalkie_big_nohaplotig	CDS	113005449	113005599	.	+	1	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 1482 1632 +
Chr2	stalkie_big_nohaplotig	CDS	113007282	113007415	.	+	0	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 1633 1766 +
Chr2	stalkie_big_nohaplotig	CDS	113007472	113007552	.	+	1	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 1767 1847 +
Chr2	stalkie_big_nohaplotig	CDS	113018426	113018526	.	+	1	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 1848 1948 +
Chr2	stalkie_big_nohaplotig	CDS	113079040	113079123	.	+	2	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 1949 2032 +
Chr2	stalkie_big_nohaplotig	CDS	113079179	113079227	.	+	2	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 2033 2081 +
Chr2	stalkie_big_nohaplotig	CDS	113082816	113082957	.	+	1	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 2082 2223 +
Chr2	stalkie_big_nohaplotig	CDS	113083248	113083453	.	+	0	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 2224 2429 +
Chr2	stalkie_big_nohaplotig	CDS	113083655	113083743	.	+	1	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 2430 2518 +
Chr2	stalkie_big_nohaplotig	CDS	113086153	113086356	.	+	2	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 2519 2722 +
Chr2	stalkie_big_nohaplotig	CDS	113086422	113087319	.	+	2	Parent=FBgn0038118.1.mrna1;Target=FBgn0038118.1 2723 3621 +
Chr2	gffcl	locus	113025859	113026791	.	-	.	ID=RLOC_00020755;geneIDs=comp113407_c0_seq1.path1,comp147971_c0_seq1.path1;transcripts=comp147971_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113026105	113026791	.	-	.	ID=comp147971_c0_seq1.mrna1;geneID=comp147971_c0_seq1.path1;Name=comp147971_c0_seq1;Dir=indeterminatecoverage=98.6;identity=99.1;matches=682;mismatches=5;indels=1;unknowns=0;Target=comp147971_c0_seq1 698 11 .;CDS_Target=comp147971_c0_seq1 533 492 .;locus=RLOC_00020755
Chr2	stalkie_big_nohaplotig	exon	113026105	113026791	99	-	.	Parent=comp147971_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113026269	113026310	.	-	0	Parent=comp147971_c0_seq1.mrna1
Chr2	gffcl	locus	113027014	113027328	.	-	.	ID=RLOC_00020756;geneIDs=comp134798_c0_seq1.path1;transcripts=comp134798_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113027014	113027328	.	-	.	ID=comp134798_c0_seq1.mrna1;geneID=comp134798_c0_seq1.path1;Name=comp134798_c0_seq1;Dir=indeterminatecoverage=94.6;identity=99.4;matches=313;mismatches=2;indels=0;unknowns=0;Target=comp134798_c0_seq1 333 19 .;CDS_Target=comp134798_c0_seq1 128 21 .;locus=RLOC_00020756
Chr2	stalkie_big_nohaplotig	exon	113027014	113027328	99	-	.	Parent=comp134798_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113027219	113027326	.	-	0	Parent=comp134798_c0_seq1.mrna1
Chr2	gffcl	locus	113030131	113033214	.	-	.	ID=RLOC_00020757;geneIDs=FBgn0260793.1.path1;transcripts=FBgn0260793.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113030131	113033214	.	-	.	ID=FBgn0260793.1.mrna1;geneID=FBgn0260793.1.path1;Name=FBgn0260793.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=3078;mismatches=6;indels=0;unknowns=0;Target=FBgn0260793.1 3084 1 .;locus=RLOC_00020757
Chr2	stalkie_big_nohaplotig	exon	113030131	113033214	99	-	.	Parent=FBgn0260793.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113030131	113033214	.	-	0	Parent=FBgn0260793.1.mrna1
Chr2	gffcl	locus	113093188	113094161	.	-	.	ID=RLOC_00020758;geneIDs=comp154796_c0_seq1.path1;transcripts=comp154796_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113093188	113094161	.	-	.	ID=comp154796_c0_seq1.mrna1;geneID=comp154796_c0_seq1.path1;Name=comp154796_c0_seq1;Dir=sensecoverage=99.4;identity=98.4;matches=675;mismatches=2;indels=9;unknowns=0;Target=comp154796_c0_seq1 188 202 +;locus=RLOC_00020758
Chr2	stalkie_big_nohaplotig	exon	113093188	113093582	99	-	.	Parent=comp154796_c0_seq1.mrna1;Target=comp154796_c0_seq1 287 681 +
Chr2	stalkie_big_nohaplotig	exon	113093642	113093752	91	-	.	Parent=comp154796_c0_seq1.mrna1;Target=comp154796_c0_seq1 185 286 +
Chr2	stalkie_big_nohaplotig	exon	113093982	113094161	100	-	.	Parent=comp154796_c0_seq1.mrna1;Target=comp154796_c0_seq1 5 184 +
Chr2	stalkie_big_nohaplotig	CDS	113093726	113093740	.	-	0	Parent=comp154796_c0_seq1.mrna1
Chr2	gffcl	locus	113095226	113096290	.	-	.	ID=RLOC_00020759;geneIDs=ORF1749.path1;transcripts=ORF1749.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113095226	113096290	.	-	.	ID=ORF1749.mrna1;geneID=ORF1749.path1;Name=ORF1749;Dir=sensecoverage=100.0;identity=99.5;matches=1000;mismatches=5;indels=0;unknowns=0;locus=RLOC_00020759
Chr2	stalkie_big_nohaplotig	exon	113095226	113096138	99	-	.	Parent=ORF1749.mrna1;Target=ORF1749 93 1005 +
Chr2	stalkie_big_nohaplotig	exon	113096199	113096290	97	-	.	Parent=ORF1749.mrna1;Target=ORF1749 1 92 +
Chr2	stalkie_big_nohaplotig	CDS	113095226	113096138	.	-	1	Parent=ORF1749.mrna1;Target=ORF1749 93 1005 +
Chr2	stalkie_big_nohaplotig	CDS	113096199	113096290	.	-	0	Parent=ORF1749.mrna1;Target=ORF1749 1 92 +
Chr2	gffcl	locus	113109926	113110877	.	+	.	ID=RLOC_00020760;geneIDs=comp153819_c0_seq1.path1;transcripts=comp153819_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113109926	113110877	.	+	.	ID=comp153819_c0_seq1.mrna1;geneID=comp153819_c0_seq1.path1;Name=comp153819_c0_seq1;Dir=antisensecoverage=96.1;identity=100.0;matches=760;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020760
Chr2	stalkie_big_nohaplotig	exon	113109926	113110005	100	+	.	Parent=comp153819_c0_seq1.mrna1;Target=comp153819_c0_seq1 711 790 -
Chr2	stalkie_big_nohaplotig	exon	113110066	113110457	100	+	.	Parent=comp153819_c0_seq1.mrna1;Target=comp153819_c0_seq1 319 710 -
Chr2	stalkie_big_nohaplotig	exon	113110522	113110642	100	+	.	Parent=comp153819_c0_seq1.mrna1;Target=comp153819_c0_seq1 198 318 -
Chr2	stalkie_big_nohaplotig	exon	113110711	113110877	100	+	.	Parent=comp153819_c0_seq1.mrna1;Target=comp153819_c0_seq1 31 197 -
Chr2	stalkie_big_nohaplotig	CDS	113109995	113110005	.	+	0	Parent=comp153819_c0_seq1.mrna1;Target=comp153819_c0_seq1 711 721 .
Chr2	stalkie_big_nohaplotig	CDS	113110066	113110258	.	+	1	Parent=comp153819_c0_seq1.mrna1;Target=comp153819_c0_seq1 518 710 .
Chr2	gffcl	locus	113113967	113114370	.	+	.	ID=RLOC_00020761;geneIDs=FBgn0052230.1.path1;transcripts=FBgn0052230.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113113967	113114370	.	+	.	ID=FBgn0052230.1.mrna1;geneID=FBgn0052230.1.path1;Name=FBgn0052230.1;Dir=sensecoverage=100.0;identity=99.6;matches=260;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020761
Chr2	stalkie_big_nohaplotig	exon	113113967	113114026	100	+	.	Parent=FBgn0052230.1.mrna1;Target=FBgn0052230.1 1 60 +
Chr2	stalkie_big_nohaplotig	exon	113114114	113114260	100	+	.	Parent=FBgn0052230.1.mrna1;Target=FBgn0052230.1 61 207 +
Chr2	stalkie_big_nohaplotig	exon	113114317	113114370	98	+	.	Parent=FBgn0052230.1.mrna1;Target=FBgn0052230.1 208 261 +
Chr2	stalkie_big_nohaplotig	CDS	113113967	113114026	.	+	0	Parent=FBgn0052230.1.mrna1;Target=FBgn0052230.1 1 60 +
Chr2	stalkie_big_nohaplotig	CDS	113114114	113114260	.	+	0	Parent=FBgn0052230.1.mrna1;Target=FBgn0052230.1 61 207 +
Chr2	stalkie_big_nohaplotig	CDS	113114317	113114370	.	+	0	Parent=FBgn0052230.1.mrna1;Target=FBgn0052230.1 208 261 +
Chr2	gffcl	locus	113159202	113160093	.	+	.	ID=RLOC_00020763;geneIDs=ORF2652.path1;transcripts=ORF2652.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113159202	113160093	.	+	.	ID=ORF2652.mrna1;geneID=ORF2652.path1;Name=ORF2652;Dir=sensecoverage=100.0;identity=99.3;matches=822;mismatches=6;indels=0;unknowns=0;locus=RLOC_00020763
Chr2	stalkie_big_nohaplotig	exon	113159202	113159284	96	+	.	Parent=ORF2652.mrna1;Target=ORF2652 1 83 +
Chr2	stalkie_big_nohaplotig	exon	113159349	113160093	99	+	.	Parent=ORF2652.mrna1;Target=ORF2652 84 828 +
Chr2	stalkie_big_nohaplotig	CDS	113159202	113159284	.	+	0	Parent=ORF2652.mrna1;Target=ORF2652 1 83 +
Chr2	stalkie_big_nohaplotig	CDS	113159349	113160093	.	+	1	Parent=ORF2652.mrna1;Target=ORF2652 84 828 +
Chr2	gffcl	locus	113162998	113163799	.	+	.	ID=RLOC_00020764;geneIDs=comp122032_c0_seq1.path1;transcripts=comp122032_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113162998	113163799	.	+	.	ID=comp122032_c0_seq1.mrna1;geneID=comp122032_c0_seq1.path1;Name=comp122032_c0_seq1;Dir=sensecoverage=99.7;identity=98.4;matches=668;mismatches=8;indels=3;unknowns=0;locus=RLOC_00020764
Chr2	stalkie_big_nohaplotig	exon	113162998	113163138	97	+	.	Parent=comp122032_c0_seq1.mrna1;Target=comp122032_c0_seq1 1 143 +
Chr2	stalkie_big_nohaplotig	exon	113163208	113163383	100	+	.	Parent=comp122032_c0_seq1.mrna1;Target=comp122032_c0_seq1 144 319 +
Chr2	stalkie_big_nohaplotig	exon	113163440	113163799	98	+	.	Parent=comp122032_c0_seq1.mrna1;Target=comp122032_c0_seq1 320 678 +
Chr2	stalkie_big_nohaplotig	CDS	113163125	113163138	.	+	0	Parent=comp122032_c0_seq1.mrna1;Target=comp122032_c0_seq1 130 143 +
Chr2	stalkie_big_nohaplotig	CDS	113163208	113163383	.	+	1	Parent=comp122032_c0_seq1.mrna1;Target=comp122032_c0_seq1 144 319 +
Chr2	stalkie_big_nohaplotig	CDS	113163440	113163465	.	+	2	Parent=comp122032_c0_seq1.mrna1;Target=comp122032_c0_seq1 320 345 +
Chr2	gffcl	locus	113168616	113184232	.	-	.	ID=RLOC_00020765;geneIDs=FBgn0038126.1.path1;transcripts=FBgn0038126.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113168616	113184232	.	-	.	ID=FBgn0038126.1.mrna1;geneID=FBgn0038126.1.path1;Name=FBgn0038126.1;Dir=sensecoverage=100.0;identity=100.0;matches=1152;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020765
Chr2	stalkie_big_nohaplotig	exon	113168616	113169204	100	-	.	Parent=FBgn0038126.1.mrna1;Target=FBgn0038126.1 564 1152 +
Chr2	stalkie_big_nohaplotig	exon	113170281	113170378	100	-	.	Parent=FBgn0038126.1.mrna1;Target=FBgn0038126.1 466 563 +
Chr2	stalkie_big_nohaplotig	exon	113170449	113170609	100	-	.	Parent=FBgn0038126.1.mrna1;Target=FBgn0038126.1 305 465 +
Chr2	stalkie_big_nohaplotig	exon	113171239	113171439	100	-	.	Parent=FBgn0038126.1.mrna1;Target=FBgn0038126.1 104 304 +
Chr2	stalkie_big_nohaplotig	exon	113184130	113184232	100	-	.	Parent=FBgn0038126.1.mrna1;Target=FBgn0038126.1 1 103 +
Chr2	stalkie_big_nohaplotig	CDS	113168616	113169204	.	-	1	Parent=FBgn0038126.1.mrna1;Target=FBgn0038126.1 564 1152 +
Chr2	stalkie_big_nohaplotig	CDS	113170281	113170378	.	-	0	Parent=FBgn0038126.1.mrna1;Target=FBgn0038126.1 466 563 +
Chr2	stalkie_big_nohaplotig	CDS	113170449	113170609	.	-	2	Parent=FBgn0038126.1.mrna1;Target=FBgn0038126.1 305 465 +
Chr2	stalkie_big_nohaplotig	CDS	113171239	113171439	.	-	2	Parent=FBgn0038126.1.mrna1;Target=FBgn0038126.1 104 304 +
Chr2	stalkie_big_nohaplotig	CDS	113184130	113184232	.	-	0	Parent=FBgn0038126.1.mrna1;Target=FBgn0038126.1 1 103 +
Chr2	gffcl	locus	113216472	113217542	.	-	.	ID=RLOC_00020766;geneIDs=comp135536_c0_seq1.path1,comp731437_c0_seq1.path1;transcripts=comp135536_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113216472	113217364	.	-	.	ID=comp135536_c0_seq1.mrna1;geneID=comp135536_c0_seq1.path1;Name=comp135536_c0_seq1;Dir=indeterminatecoverage=98.6;identity=100.0;matches=893;mismatches=0;indels=0;unknowns=0;Target=comp135536_c0_seq1 906 14 .;CDS_Target=comp135536_c0_seq1 232 155 .;locus=RLOC_00020766
Chr2	stalkie_big_nohaplotig	exon	113216472	113217364	100	-	.	Parent=comp135536_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113217146	113217223	.	-	0	Parent=comp135536_c0_seq1.mrna1
Chr2	gffcl	locus	113218507	113219561	.	-	.	ID=RLOC_00020767;geneIDs=comp155562_c0_seq1.path1;transcripts=comp155562_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113218507	113219561	.	-	.	ID=comp155562_c0_seq1.mrna1;geneID=comp155562_c0_seq1.path1;Name=comp155562_c0_seq1;Dir=antisensecoverage=100.0;identity=98.8;matches=915;mismatches=7;indels=4;unknowns=0;Target=comp155562_c0_seq1 336 410 .;locus=RLOC_00020767
Chr2	stalkie_big_nohaplotig	exon	113218507	113218684	97	-	.	Parent=comp155562_c0_seq1.mrna1;Target=comp155562_c0_seq1 1 175 -
Chr2	stalkie_big_nohaplotig	exon	113218815	113219561	99	-	.	Parent=comp155562_c0_seq1.mrna1;Target=comp155562_c0_seq1 176 923 -
Chr2	stalkie_big_nohaplotig	CDS	113218974	113219048	.	-	0	Parent=comp155562_c0_seq1.mrna1
Chr2	gffcl	locus	113219597	113221012	.	+	.	ID=RLOC_00020768;geneIDs=comp152617_c0_seq1.path1,comp155842_c0_seq1.path1;transcripts=comp155842_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113219597	113220400	.	+	.	ID=comp155842_c0_seq1.mrna1;geneID=comp155842_c0_seq1.path1;Name=comp155842_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=802;mismatches=1;indels=1;unknowns=0;Target=comp155842_c0_seq1 803 1 .;CDS_Target=comp155842_c0_seq1 794 501 .;locus=RLOC_00020768
Chr2	stalkie_big_nohaplotig	exon	113219597	113220400	99	+	.	Parent=comp155842_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113220097	113220391	.	+	0	Parent=comp155842_c0_seq1.mrna1
Chr2	gffcl	locus	113222101	113222909	.	+	.	ID=RLOC_00020769;geneIDs=comp151022_c0_seq1.path1;transcripts=comp151022_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113222101	113222909	.	+	.	ID=comp151022_c0_seq1.mrna1;geneID=comp151022_c0_seq1.path1;Name=comp151022_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=808;mismatches=1;indels=1;unknowns=0;Target=comp151022_c0_seq1 810 1 .;CDS_Target=comp151022_c0_seq1 372 286 .;locus=RLOC_00020769
Chr2	stalkie_big_nohaplotig	exon	113222101	113222909	99	+	.	Parent=comp151022_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113222386	113222472	.	+	0	Parent=comp151022_c0_seq1.mrna1
Chr2	gffcl	locus	113224892	113264240	.	-	.	ID=RLOC_00020770;geneIDs=FBgn0000024.1.path1;transcripts=FBgn0000024.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113224892	113264240	.	-	.	ID=FBgn0000024.1.mrna1;geneID=FBgn0000024.1.path1;Name=FBgn0000024.1;Dir=sensecoverage=100.0;identity=99.9;matches=1952;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020770
Chr2	stalkie_big_nohaplotig	exon	113224892	113225013	100	-	.	Parent=FBgn0000024.1.mrna1;Target=FBgn0000024.1 1832 1953 +
Chr2	stalkie_big_nohaplotig	exon	113238137	113238300	100	-	.	Parent=FBgn0000024.1.mrna1;Target=FBgn0000024.1 1668 1831 +
Chr2	stalkie_big_nohaplotig	exon	113239871	113240034	100	-	.	Parent=FBgn0000024.1.mrna1;Target=FBgn0000024.1 1504 1667 +
Chr2	stalkie_big_nohaplotig	exon	113248494	113248643	100	-	.	Parent=FBgn0000024.1.mrna1;Target=FBgn0000024.1 1354 1503 +
Chr2	stalkie_big_nohaplotig	exon	113249715	113249857	100	-	.	Parent=FBgn0000024.1.mrna1;Target=FBgn0000024.1 1211 1353 +
Chr2	stalkie_big_nohaplotig	exon	113259404	113259611	100	-	.	Parent=FBgn0000024.1.mrna1;Target=FBgn0000024.1 1003 1210 +
Chr2	stalkie_big_nohaplotig	exon	113259694	113260230	99	-	.	Parent=FBgn0000024.1.mrna1;Target=FBgn0000024.1 466 1002 +
Chr2	stalkie_big_nohaplotig	exon	113260422	113260560	100	-	.	Parent=FBgn0000024.1.mrna1;Target=FBgn0000024.1 327 465 +
Chr2	stalkie_big_nohaplotig	exon	113263915	113264240	100	-	.	Parent=FBgn0000024.1.mrna1;Target=FBgn0000024.1 1 326 +
Chr2	stalkie_big_nohaplotig	CDS	113224892	113225013	.	-	2	Parent=FBgn0000024.1.mrna1;Target=FBgn0000024.1 1832 1953 +
Chr2	stalkie_big_nohaplotig	CDS	113238137	113238300	.	-	1	Parent=FBgn0000024.1.mrna1;Target=FBgn0000024.1 1668 1831 +
Chr2	stalkie_big_nohaplotig	CDS	113239871	113240034	.	-	0	Parent=FBgn0000024.1.mrna1;Target=FBgn0000024.1 1504 1667 +
Chr2	stalkie_big_nohaplotig	CDS	113248494	113248643	.	-	0	Parent=FBgn0000024.1.mrna1;Target=FBgn0000024.1 1354 1503 +
Chr2	stalkie_big_nohaplotig	CDS	113249715	113249857	.	-	2	Parent=FBgn0000024.1.mrna1;Target=FBgn0000024.1 1211 1353 +
Chr2	stalkie_big_nohaplotig	CDS	113259404	113259611	.	-	0	Parent=FBgn0000024.1.mrna1;Target=FBgn0000024.1 1003 1210 +
Chr2	stalkie_big_nohaplotig	CDS	113259694	113260230	.	-	0	Parent=FBgn0000024.1.mrna1;Target=FBgn0000024.1 466 1002 +
Chr2	stalkie_big_nohaplotig	CDS	113260422	113260560	.	-	1	Parent=FBgn0000024.1.mrna1;Target=FBgn0000024.1 327 465 +
Chr2	stalkie_big_nohaplotig	CDS	113263915	113264240	.	-	0	Parent=FBgn0000024.1.mrna1;Target=FBgn0000024.1 1 326 +
Chr2	gffcl	locus	113239506	113427521	.	+	.	ID=RLOC_00020771;geneIDs=FBgn0037025.1.path1,FBgn0261380.1.path1,comp146520_c0_seq1.path1;transcripts=comp146520_c0_seq1.mrna1,FBgn0261380.1.mrna1,FBgn0037025.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113239506	113427521	.	+	.	ID=comp146520_c0_seq1.mrna1;geneID=comp146520_c0_seq1.path1;Name=comp146520_c0_seq1;Dir=indeterminatecoverage=95.1;identity=99.0;matches=1018;mismatches=10;indels=0;unknowns=0;Target=comp146520_c0_seq1 296 237 .;locus=RLOC_00020771
Chr2	stalkie_big_nohaplotig	exon	113239506	113239510	100	+	.	Parent=comp146520_c0_seq1.mrna1;Target=comp146520_c0_seq1 58 54 .
Chr2	stalkie_big_nohaplotig	exon	113246264	113246268	100	+	.	Parent=comp146520_c0_seq1.mrna1;Target=comp146520_c0_seq1 63 59 .
Chr2	stalkie_big_nohaplotig	exon	113251378	113251384	100	+	.	Parent=comp146520_c0_seq1.mrna1;Target=comp146520_c0_seq1 70 64 .
Chr2	stalkie_big_nohaplotig	exon	113253986	113253987	100	+	.	Parent=comp146520_c0_seq1.mrna1;Target=comp146520_c0_seq1 72 71 .
Chr2	stalkie_big_nohaplotig	exon	113258366	113258369	100	+	.	Parent=comp146520_c0_seq1.mrna1;Target=comp146520_c0_seq1 76 73 .
Chr2	stalkie_big_nohaplotig	exon	113261050	113261053	100	+	.	Parent=comp146520_c0_seq1.mrna1;Target=comp146520_c0_seq1 80 77 .
Chr2	stalkie_big_nohaplotig	exon	113269017	113269023	100	+	.	Parent=comp146520_c0_seq1.mrna1;Target=comp146520_c0_seq1 87 81 .
Chr2	stalkie_big_nohaplotig	exon	113272636	113272639	100	+	.	Parent=comp146520_c0_seq1.mrna1;Target=comp146520_c0_seq1 91 88 .
Chr2	stalkie_big_nohaplotig	exon	113276915	113276919	80	+	.	Parent=comp146520_c0_seq1.mrna1;Target=comp146520_c0_seq1 96 92 .
Chr2	stalkie_big_nohaplotig	exon	113281584	113281588	100	+	.	Parent=comp146520_c0_seq1.mrna1;Target=comp146520_c0_seq1 101 97 .
Chr2	stalkie_big_nohaplotig	exon	113284906	113284910	100	+	.	Parent=comp146520_c0_seq1.mrna1;Target=comp146520_c0_seq1 106 102 .
Chr2	stalkie_big_nohaplotig	exon	113299623	113299630	100	+	.	Parent=comp146520_c0_seq1.mrna1;Target=comp146520_c0_seq1 114 107 .
Chr2	stalkie_big_nohaplotig	exon	113323214	113323222	100	+	.	Parent=comp146520_c0_seq1.mrna1;Target=comp146520_c0_seq1 123 115 .
Chr2	stalkie_big_nohaplotig	exon	113338368	113338374	100	+	.	Parent=comp146520_c0_seq1.mrna1;Target=comp146520_c0_seq1 130 124 .
Chr2	stalkie_big_nohaplotig	exon	113379326	113379330	100	+	.	Parent=comp146520_c0_seq1.mrna1;Target=comp146520_c0_seq1 135 131 .
Chr2	stalkie_big_nohaplotig	exon	113386979	113386985	100	+	.	Parent=comp146520_c0_seq1.mrna1;Target=comp146520_c0_seq1 142 136 .
Chr2	stalkie_big_nohaplotig	exon	113426583	113427521	99	+	.	Parent=comp146520_c0_seq1.mrna1;Target=comp146520_c0_seq1 1081 143 .
Chr2	stalkie_big_nohaplotig	CDS	113426677	113426736	.	+	0	Parent=comp146520_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113377955	113379441	.	+	.	ID=FBgn0261380.1.mrna1;geneID=FBgn0261380.1.path1;Name=FBgn0261380.1;Dir=sensecoverage=100.0;identity=99.7;matches=1229;mismatches=4;indels=0;unknowns=0;locus=RLOC_00020771
Chr2	stalkie_big_nohaplotig	exon	113377955	113378142	100	+	.	Parent=FBgn0261380.1.mrna1;Target=FBgn0261380.1 1 188 +
Chr2	stalkie_big_nohaplotig	exon	113378209	113378544	99	+	.	Parent=FBgn0261380.1.mrna1;Target=FBgn0261380.1 189 524 +
Chr2	stalkie_big_nohaplotig	exon	113378604	113378884	100	+	.	Parent=FBgn0261380.1.mrna1;Target=FBgn0261380.1 525 805 +
Chr2	stalkie_big_nohaplotig	exon	113378953	113379122	100	+	.	Parent=FBgn0261380.1.mrna1;Target=FBgn0261380.1 806 975 +
Chr2	stalkie_big_nohaplotig	exon	113379184	113379441	99	+	.	Parent=FBgn0261380.1.mrna1;Target=FBgn0261380.1 976 1233 +
Chr2	stalkie_big_nohaplotig	CDS	113377955	113378142	.	+	0	Parent=FBgn0261380.1.mrna1;Target=FBgn0261380.1 1 188 +
Chr2	stalkie_big_nohaplotig	CDS	113378209	113378544	.	+	1	Parent=FBgn0261380.1.mrna1;Target=FBgn0261380.1 189 524 +
Chr2	stalkie_big_nohaplotig	CDS	113378604	113378884	.	+	1	Parent=FBgn0261380.1.mrna1;Target=FBgn0261380.1 525 805 +
Chr2	stalkie_big_nohaplotig	CDS	113378953	113379122	.	+	2	Parent=FBgn0261380.1.mrna1;Target=FBgn0261380.1 806 975 +
Chr2	stalkie_big_nohaplotig	CDS	113379184	113379441	.	+	0	Parent=FBgn0261380.1.mrna1;Target=FBgn0261380.1 976 1233 +
Chr2	stalkie_big_nohaplotig	mRNA	113381623	113388014	.	+	.	ID=FBgn0037025.1.mrna1;geneID=FBgn0037025.1.path1;Name=FBgn0037025.1;Dir=sensecoverage=100.0;identity=99.6;matches=5383;mismatches=23;indels=0;unknowns=0;locus=RLOC_00020771
Chr2	stalkie_big_nohaplotig	exon	113381623	113381751	100	+	.	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 1 129 +
Chr2	stalkie_big_nohaplotig	exon	113381836	113381930	100	+	.	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 130 224 +
Chr2	stalkie_big_nohaplotig	exon	113381994	113382465	100	+	.	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 225 696 +
Chr2	stalkie_big_nohaplotig	exon	113382754	113383285	100	+	.	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 697 1228 +
Chr2	stalkie_big_nohaplotig	exon	113383343	113383447	100	+	.	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 1229 1333 +
Chr2	stalkie_big_nohaplotig	exon	113383510	113385799	99	+	.	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 1334 3623 +
Chr2	stalkie_big_nohaplotig	exon	113385859	113385990	100	+	.	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 3624 3755 +
Chr2	stalkie_big_nohaplotig	exon	113386054	113387022	99	+	.	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 3756 4724 +
Chr2	stalkie_big_nohaplotig	exon	113387150	113387236	100	+	.	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 4725 4811 +
Chr2	stalkie_big_nohaplotig	exon	113387290	113387459	100	+	.	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 4812 4981 +
Chr2	stalkie_big_nohaplotig	exon	113387521	113387722	99	+	.	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 4982 5183 +
Chr2	stalkie_big_nohaplotig	exon	113387792	113388014	98	+	.	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 5184 5406 +
Chr2	stalkie_big_nohaplotig	CDS	113381623	113381751	.	+	0	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 1 129 +
Chr2	stalkie_big_nohaplotig	CDS	113381836	113381930	.	+	0	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 130 224 +
Chr2	stalkie_big_nohaplotig	CDS	113381994	113382465	.	+	1	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 225 696 +
Chr2	stalkie_big_nohaplotig	CDS	113382754	113383285	.	+	0	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 697 1228 +
Chr2	stalkie_big_nohaplotig	CDS	113383343	113383447	.	+	2	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 1229 1333 +
Chr2	stalkie_big_nohaplotig	CDS	113383510	113385799	.	+	2	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 1334 3623 +
Chr2	stalkie_big_nohaplotig	CDS	113385859	113385990	.	+	1	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 3624 3755 +
Chr2	stalkie_big_nohaplotig	CDS	113386054	113387022	.	+	1	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 3756 4724 +
Chr2	stalkie_big_nohaplotig	CDS	113387150	113387236	.	+	1	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 4725 4811 +
Chr2	stalkie_big_nohaplotig	CDS	113387290	113387459	.	+	1	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 4812 4981 +
Chr2	stalkie_big_nohaplotig	CDS	113387521	113387722	.	+	2	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 4982 5183 +
Chr2	stalkie_big_nohaplotig	CDS	113387792	113388014	.	+	1	Parent=FBgn0037025.1.mrna1;Target=FBgn0037025.1 5184 5406 +
Chr2	gffcl	locus	113295562	113297256	.	-	.	ID=RLOC_00020772;geneIDs=comp152793_c0_seq1.path1;transcripts=comp152793_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113295562	113297256	.	-	.	ID=comp152793_c0_seq1.mrna1;geneID=comp152793_c0_seq1.path1;Name=comp152793_c0_seq1;Dir=sensecoverage=95.1;identity=98.5;matches=807;mismatches=2;indels=10;unknowns=0;locus=RLOC_00020772
Chr2	stalkie_big_nohaplotig	exon	113295562	113295826	95	-	.	Parent=comp152793_c0_seq1.mrna1;Target=comp152793_c0_seq1 571 825 +
Chr2	stalkie_big_nohaplotig	exon	113296135	113296298	100	-	.	Parent=comp152793_c0_seq1.mrna1;Target=comp152793_c0_seq1 407 570 +
Chr2	stalkie_big_nohaplotig	exon	113296867	113297256	99	-	.	Parent=comp152793_c0_seq1.mrna1;Target=comp152793_c0_seq1 17 406 +
Chr2	stalkie_big_nohaplotig	CDS	113296212	113296298	.	-	0	Parent=comp152793_c0_seq1.mrna1;Target=comp152793_c0_seq1 407 493 +
Chr2	stalkie_big_nohaplotig	CDS	113296867	113296995	.	-	0	Parent=comp152793_c0_seq1.mrna1;Target=comp152793_c0_seq1 278 406 +
Chr2	gffcl	locus	113299177	113303665	.	-	.	ID=RLOC_00020773;geneIDs=comp139679_c1_seq1.path1;transcripts=comp139679_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113299177	113303665	.	-	.	ID=comp139679_c1_seq1.mrna1;geneID=comp139679_c1_seq1.path1;Name=comp139679_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=589;mismatches=15;indels=2;unknowns=0;Target=comp139679_c1_seq1 376 260 .;locus=RLOC_00020773
Chr2	stalkie_big_nohaplotig	exon	113299177	113299343	98	-	.	Parent=comp139679_c1_seq1.mrna1;Target=comp139679_c1_seq1 606 440 .
Chr2	stalkie_big_nohaplotig	exon	113303229	113303665	96	-	.	Parent=comp139679_c1_seq1.mrna1;Target=comp139679_c1_seq1 439 1 .
Chr2	stalkie_big_nohaplotig	CDS	113303292	113303406	.	-	0	Parent=comp139679_c1_seq1.mrna1
Chr2	gffcl	locus	113315552	113316349	.	+	.	ID=RLOC_00020774;geneIDs=FBgn0034151.1.path1;transcripts=FBgn0034151.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113315552	113316349	.	+	.	ID=FBgn0034151.1.mrna1;geneID=FBgn0034151.1.path1;Name=FBgn0034151.1;Dir=sensecoverage=99.1;identity=100.0;matches=675;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020774
Chr2	stalkie_big_nohaplotig	exon	113315552	113315889	100	+	.	Parent=FBgn0034151.1.mrna1;Target=FBgn0034151.1 7 344 +
Chr2	stalkie_big_nohaplotig	exon	113315951	113316006	100	+	.	Parent=FBgn0034151.1.mrna1;Target=FBgn0034151.1 345 400 +
Chr2	stalkie_big_nohaplotig	exon	113316069	113316349	100	+	.	Parent=FBgn0034151.1.mrna1;Target=FBgn0034151.1 401 681 +
Chr2	stalkie_big_nohaplotig	CDS	113315552	113315889	.	+	0	Parent=FBgn0034151.1.mrna1;Target=FBgn0034151.1 7 344 +
Chr2	stalkie_big_nohaplotig	CDS	113315951	113316006	.	+	1	Parent=FBgn0034151.1.mrna1;Target=FBgn0034151.1 345 400 +
Chr2	stalkie_big_nohaplotig	CDS	113316069	113316349	.	+	2	Parent=FBgn0034151.1.mrna1;Target=FBgn0034151.1 401 681 +
Chr2	gffcl	locus	113317179	113319313	.	-	.	ID=RLOC_00020775;geneIDs=FBgn0262801.1.path1;transcripts=FBgn0262801.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113317179	113319313	.	-	.	ID=FBgn0262801.1.mrna1;geneID=FBgn0262801.1.path1;Name=FBgn0262801.1;Dir=sensecoverage=100.0;identity=99.8;matches=575;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020775
Chr2	stalkie_big_nohaplotig	exon	113317179	113317226	100	-	.	Parent=FBgn0262801.1.mrna1;Target=FBgn0262801.1 529 576 +
Chr2	stalkie_big_nohaplotig	exon	113317296	113317473	99	-	.	Parent=FBgn0262801.1.mrna1;Target=FBgn0262801.1 351 528 +
Chr2	stalkie_big_nohaplotig	exon	113318892	113319151	100	-	.	Parent=FBgn0262801.1.mrna1;Target=FBgn0262801.1 91 350 +
Chr2	stalkie_big_nohaplotig	exon	113319224	113319313	100	-	.	Parent=FBgn0262801.1.mrna1;Target=FBgn0262801.1 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	113317179	113317226	.	-	0	Parent=FBgn0262801.1.mrna1;Target=FBgn0262801.1 529 576 +
Chr2	stalkie_big_nohaplotig	CDS	113317296	113317473	.	-	1	Parent=FBgn0262801.1.mrna1;Target=FBgn0262801.1 351 528 +
Chr2	stalkie_big_nohaplotig	CDS	113318892	113319151	.	-	0	Parent=FBgn0262801.1.mrna1;Target=FBgn0262801.1 91 350 +
Chr2	stalkie_big_nohaplotig	CDS	113319224	113319313	.	-	0	Parent=FBgn0262801.1.mrna1;Target=FBgn0262801.1 1 90 +
Chr2	gffcl	locus	113321049	113321652	.	+	.	ID=RLOC_00020776;geneIDs=FBgn0026566.1.path1;transcripts=FBgn0026566.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113321049	113321652	.	+	.	ID=FBgn0026566.1.mrna1;geneID=FBgn0026566.1.path1;Name=FBgn0026566.1;Dir=sensecoverage=100.0;identity=99.6;matches=544;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020776
Chr2	stalkie_big_nohaplotig	exon	113321049	113321225	100	+	.	Parent=FBgn0026566.1.mrna1;Target=FBgn0026566.1 1 177 +
Chr2	stalkie_big_nohaplotig	exon	113321284	113321652	99	+	.	Parent=FBgn0026566.1.mrna1;Target=FBgn0026566.1 178 546 +
Chr2	stalkie_big_nohaplotig	CDS	113321049	113321225	.	+	0	Parent=FBgn0026566.1.mrna1;Target=FBgn0026566.1 1 177 +
Chr2	stalkie_big_nohaplotig	CDS	113321284	113321652	.	+	0	Parent=FBgn0026566.1.mrna1;Target=FBgn0026566.1 178 546 +
Chr2	gffcl	locus	113322384	113324130	.	-	.	ID=RLOC_00020777;geneIDs=FBgn0037838.1.path1;transcripts=FBgn0037838.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113322384	113324130	.	-	.	ID=FBgn0037838.1.mrna1;geneID=FBgn0037838.1.path1;Name=FBgn0037838.1;Dir=sensecoverage=100.0;identity=99.9;matches=1564;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020777
Chr2	stalkie_big_nohaplotig	exon	113322384	113322497	99	-	.	Parent=FBgn0037838.1.mrna1;Target=FBgn0037838.1 1453 1566 +
Chr2	stalkie_big_nohaplotig	exon	113322558	113322771	100	-	.	Parent=FBgn0037838.1.mrna1;Target=FBgn0037838.1 1239 1452 +
Chr2	stalkie_big_nohaplotig	exon	113322836	113324025	99	-	.	Parent=FBgn0037838.1.mrna1;Target=FBgn0037838.1 49 1238 +
Chr2	stalkie_big_nohaplotig	exon	113324083	113324130	100	-	.	Parent=FBgn0037838.1.mrna1;Target=FBgn0037838.1 1 48 +
Chr2	stalkie_big_nohaplotig	CDS	113322384	113322497	.	-	0	Parent=FBgn0037838.1.mrna1;Target=FBgn0037838.1 1453 1566 +
Chr2	stalkie_big_nohaplotig	CDS	113322558	113322771	.	-	1	Parent=FBgn0037838.1.mrna1;Target=FBgn0037838.1 1239 1452 +
Chr2	stalkie_big_nohaplotig	CDS	113322836	113324025	.	-	0	Parent=FBgn0037838.1.mrna1;Target=FBgn0037838.1 49 1238 +
Chr2	stalkie_big_nohaplotig	CDS	113324083	113324130	.	-	0	Parent=FBgn0037838.1.mrna1;Target=FBgn0037838.1 1 48 +
Chr2	gffcl	locus	113326406	113329025	.	+	.	ID=RLOC_00020778;geneIDs=FBgn0030051.3.path1;transcripts=FBgn0030051.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113326406	113329025	.	+	.	ID=FBgn0030051.3.mrna1;geneID=FBgn0030051.3.path1;Name=FBgn0030051.3;Dir=sensecoverage=100.0;identity=98.9;matches=1033;mismatches=11;indels=0;unknowns=0;locus=RLOC_00020778
Chr2	stalkie_big_nohaplotig	exon	113326406	113326733	98	+	.	Parent=FBgn0030051.3.mrna1;Target=FBgn0030051.3 1 328 +
Chr2	stalkie_big_nohaplotig	exon	113326798	113326865	100	+	.	Parent=FBgn0030051.3.mrna1;Target=FBgn0030051.3 329 396 +
Chr2	stalkie_big_nohaplotig	exon	113326924	113327033	100	+	.	Parent=FBgn0030051.3.mrna1;Target=FBgn0030051.3 397 506 +
Chr2	stalkie_big_nohaplotig	exon	113328210	113328430	99	+	.	Parent=FBgn0030051.3.mrna1;Target=FBgn0030051.3 507 727 +
Chr2	stalkie_big_nohaplotig	exon	113328494	113328654	97	+	.	Parent=FBgn0030051.3.mrna1;Target=FBgn0030051.3 728 888 +
Chr2	stalkie_big_nohaplotig	exon	113328870	113329025	100	+	.	Parent=FBgn0030051.3.mrna1;Target=FBgn0030051.3 889 1044 +
Chr2	stalkie_big_nohaplotig	CDS	113326406	113326733	.	+	0	Parent=FBgn0030051.3.mrna1;Target=FBgn0030051.3 1 328 +
Chr2	stalkie_big_nohaplotig	CDS	113326798	113326865	.	+	2	Parent=FBgn0030051.3.mrna1;Target=FBgn0030051.3 329 396 +
Chr2	stalkie_big_nohaplotig	CDS	113326924	113327033	.	+	0	Parent=FBgn0030051.3.mrna1;Target=FBgn0030051.3 397 506 +
Chr2	stalkie_big_nohaplotig	CDS	113328210	113328430	.	+	1	Parent=FBgn0030051.3.mrna1;Target=FBgn0030051.3 507 727 +
Chr2	stalkie_big_nohaplotig	CDS	113328494	113328654	.	+	2	Parent=FBgn0030051.3.mrna1;Target=FBgn0030051.3 728 888 +
Chr2	stalkie_big_nohaplotig	CDS	113328870	113329025	.	+	0	Parent=FBgn0030051.3.mrna1;Target=FBgn0030051.3 889 1044 +
Chr2	gffcl	locus	113329210	113335943	.	+	.	ID=RLOC_00020779;geneIDs=FBgn0030721.1.path1;transcripts=FBgn0030721.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113329210	113335943	.	+	.	ID=FBgn0030721.1.mrna1;geneID=FBgn0030721.1.path1;Name=FBgn0030721.1;Dir=sensecoverage=100.0;identity=99.7;matches=2108;mismatches=7;indels=0;unknowns=0;locus=RLOC_00020779
Chr2	stalkie_big_nohaplotig	exon	113329210	113329431	100	+	.	Parent=FBgn0030721.1.mrna1;Target=FBgn0030721.1 1 222 +
Chr2	stalkie_big_nohaplotig	exon	113329489	113329593	98	+	.	Parent=FBgn0030721.1.mrna1;Target=FBgn0030721.1 223 327 +
Chr2	stalkie_big_nohaplotig	exon	113330530	113330673	99	+	.	Parent=FBgn0030721.1.mrna1;Target=FBgn0030721.1 328 471 +
Chr2	stalkie_big_nohaplotig	exon	113330738	113330849	99	+	.	Parent=FBgn0030721.1.mrna1;Target=FBgn0030721.1 472 583 +
Chr2	stalkie_big_nohaplotig	exon	113332966	113333099	100	+	.	Parent=FBgn0030721.1.mrna1;Target=FBgn0030721.1 584 717 +
Chr2	stalkie_big_nohaplotig	exon	113333168	113333308	100	+	.	Parent=FBgn0030721.1.mrna1;Target=FBgn0030721.1 718 858 +
Chr2	stalkie_big_nohaplotig	exon	113333365	113333601	100	+	.	Parent=FBgn0030721.1.mrna1;Target=FBgn0030721.1 859 1095 +
Chr2	stalkie_big_nohaplotig	exon	113334924	113335943	99	+	.	Parent=FBgn0030721.1.mrna1;Target=FBgn0030721.1 1096 2115 +
Chr2	stalkie_big_nohaplotig	CDS	113329210	113329431	.	+	0	Parent=FBgn0030721.1.mrna1;Target=FBgn0030721.1 1 222 +
Chr2	stalkie_big_nohaplotig	CDS	113329489	113329593	.	+	0	Parent=FBgn0030721.1.mrna1;Target=FBgn0030721.1 223 327 +
Chr2	stalkie_big_nohaplotig	CDS	113330530	113330673	.	+	0	Parent=FBgn0030721.1.mrna1;Target=FBgn0030721.1 328 471 +
Chr2	stalkie_big_nohaplotig	CDS	113330738	113330849	.	+	0	Parent=FBgn0030721.1.mrna1;Target=FBgn0030721.1 472 583 +
Chr2	stalkie_big_nohaplotig	CDS	113332966	113333099	.	+	2	Parent=FBgn0030721.1.mrna1;Target=FBgn0030721.1 584 717 +
Chr2	stalkie_big_nohaplotig	CDS	113333168	113333308	.	+	0	Parent=FBgn0030721.1.mrna1;Target=FBgn0030721.1 718 858 +
Chr2	stalkie_big_nohaplotig	CDS	113333365	113333601	.	+	0	Parent=FBgn0030721.1.mrna1;Target=FBgn0030721.1 859 1095 +
Chr2	stalkie_big_nohaplotig	CDS	113334924	113335943	.	+	0	Parent=FBgn0030721.1.mrna1;Target=FBgn0030721.1 1096 2115 +
Chr2	gffcl	locus	113350663	113354483	.	+	.	ID=RLOC_00020780;geneIDs=FBgn0037836.path1;transcripts=FBgn0037836.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113350663	113354483	.	+	.	ID=FBgn0037836.mrna1;geneID=FBgn0037836.path1;Name=FBgn0037836;Dir=sensecoverage=100.0;identity=99.9;matches=1556;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020780
Chr2	stalkie_big_nohaplotig	exon	113350663	113352013	99	+	.	Parent=FBgn0037836.mrna1;Target=FBgn0037836 1 1351 +
Chr2	stalkie_big_nohaplotig	exon	113354278	113354483	100	+	.	Parent=FBgn0037836.mrna1;Target=FBgn0037836 1352 1557 +
Chr2	stalkie_big_nohaplotig	CDS	113350663	113352013	.	+	0	Parent=FBgn0037836.mrna1;Target=FBgn0037836 1 1351 +
Chr2	stalkie_big_nohaplotig	CDS	113354278	113354483	.	+	2	Parent=FBgn0037836.mrna1;Target=FBgn0037836 1352 1557 +
Chr2	gffcl	locus	113364700	113365197	.	-	.	ID=RLOC_00020782;geneIDs=comp137602_c0_seq1.path1;transcripts=comp137602_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113364700	113365197	.	-	.	ID=comp137602_c0_seq1.mrna1;geneID=comp137602_c0_seq1.path1;Name=comp137602_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=346;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020782
Chr2	stalkie_big_nohaplotig	exon	113364700	113365005	100	-	.	Parent=comp137602_c0_seq1.mrna1;Target=comp137602_c0_seq1 41 346 +
Chr2	stalkie_big_nohaplotig	exon	113365158	113365197	100	-	.	Parent=comp137602_c0_seq1.mrna1;Target=comp137602_c0_seq1 1 40 +
Chr2	stalkie_big_nohaplotig	CDS	113364896	113365005	.	-	2	Parent=comp137602_c0_seq1.mrna1;Target=comp137602_c0_seq1 41 150 +
Chr2	stalkie_big_nohaplotig	CDS	113365158	113365197	.	-	0	Parent=comp137602_c0_seq1.mrna1;Target=comp137602_c0_seq1 1 40 +
Chr2	gffcl	locus	113370584	113373070	.	-	.	ID=RLOC_00020783;geneIDs=FBgn0017577.1.path1;transcripts=FBgn0017577.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113370584	113373070	.	-	.	ID=FBgn0017577.1.mrna1;geneID=FBgn0017577.1.path1;Name=FBgn0017577.1;Dir=sensecoverage=100.0;identity=99.8;matches=2234;mismatches=4;indels=0;unknowns=0;locus=RLOC_00020783
Chr2	stalkie_big_nohaplotig	exon	113370584	113370697	99	-	.	Parent=FBgn0017577.1.mrna1;Target=FBgn0017577.1 2125 2238 +
Chr2	stalkie_big_nohaplotig	exon	113370826	113371647	99	-	.	Parent=FBgn0017577.1.mrna1;Target=FBgn0017577.1 1303 2124 +
Chr2	stalkie_big_nohaplotig	exon	113371708	113372818	99	-	.	Parent=FBgn0017577.1.mrna1;Target=FBgn0017577.1 192 1302 +
Chr2	stalkie_big_nohaplotig	exon	113372880	113373070	100	-	.	Parent=FBgn0017577.1.mrna1;Target=FBgn0017577.1 1 191 +
Chr2	stalkie_big_nohaplotig	CDS	113370584	113370697	.	-	0	Parent=FBgn0017577.1.mrna1;Target=FBgn0017577.1 2125 2238 +
Chr2	stalkie_big_nohaplotig	CDS	113370826	113371647	.	-	0	Parent=FBgn0017577.1.mrna1;Target=FBgn0017577.1 1303 2124 +
Chr2	stalkie_big_nohaplotig	CDS	113371708	113372818	.	-	1	Parent=FBgn0017577.1.mrna1;Target=FBgn0017577.1 192 1302 +
Chr2	stalkie_big_nohaplotig	CDS	113372880	113373070	.	-	0	Parent=FBgn0017577.1.mrna1;Target=FBgn0017577.1 1 191 +
Chr2	gffcl	locus	113375554	113377212	.	+	.	ID=RLOC_00020784;geneIDs=FBgn0037834.4.path1;transcripts=FBgn0037834.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113375554	113377212	.	+	.	ID=FBgn0037834.4.mrna1;geneID=FBgn0037834.4.path1;Name=FBgn0037834.4;Dir=sensecoverage=100.0;identity=99.7;matches=1104;mismatches=3;indels=0;unknowns=0;locus=RLOC_00020784
Chr2	stalkie_big_nohaplotig	exon	113375554	113375574	100	+	.	Parent=FBgn0037834.4.mrna1;Target=FBgn0037834.4 1 21 +
Chr2	stalkie_big_nohaplotig	exon	113375636	113375872	99	+	.	Parent=FBgn0037834.4.mrna1;Target=FBgn0037834.4 22 258 +
Chr2	stalkie_big_nohaplotig	exon	113375936	113376165	99	+	.	Parent=FBgn0037834.4.mrna1;Target=FBgn0037834.4 259 488 +
Chr2	stalkie_big_nohaplotig	exon	113376594	113377212	99	+	.	Parent=FBgn0037834.4.mrna1;Target=FBgn0037834.4 489 1107 +
Chr2	stalkie_big_nohaplotig	CDS	113375554	113375574	.	+	0	Parent=FBgn0037834.4.mrna1;Target=FBgn0037834.4 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	113375636	113375872	.	+	0	Parent=FBgn0037834.4.mrna1;Target=FBgn0037834.4 22 258 +
Chr2	stalkie_big_nohaplotig	CDS	113375936	113376165	.	+	0	Parent=FBgn0037834.4.mrna1;Target=FBgn0037834.4 259 488 +
Chr2	stalkie_big_nohaplotig	CDS	113376594	113377212	.	+	1	Parent=FBgn0037834.4.mrna1;Target=FBgn0037834.4 489 1107 +
Chr2	gffcl	locus	113388367	113391845	.	+	.	ID=RLOC_00020785;geneIDs=FBgn0261356.1.path1;transcripts=FBgn0261356.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113388367	113391845	.	+	.	ID=FBgn0261356.1.mrna1;geneID=FBgn0261356.1.path1;Name=FBgn0261356.1;Dir=sensecoverage=100.0;identity=99.2;matches=1101;mismatches=9;indels=0;unknowns=0;locus=RLOC_00020785
Chr2	stalkie_big_nohaplotig	exon	113388367	113388389	100	+	.	Parent=FBgn0261356.1.mrna1;Target=FBgn0261356.1 1 23 +
Chr2	stalkie_big_nohaplotig	exon	113390653	113390796	99	+	.	Parent=FBgn0261356.1.mrna1;Target=FBgn0261356.1 24 167 +
Chr2	stalkie_big_nohaplotig	exon	113390844	113391022	100	+	.	Parent=FBgn0261356.1.mrna1;Target=FBgn0261356.1 168 346 +
Chr2	stalkie_big_nohaplotig	exon	113391082	113391845	98	+	.	Parent=FBgn0261356.1.mrna1;Target=FBgn0261356.1 347 1110 +
Chr2	stalkie_big_nohaplotig	CDS	113388367	113388389	.	+	0	Parent=FBgn0261356.1.mrna1;Target=FBgn0261356.1 1 23 +
Chr2	stalkie_big_nohaplotig	CDS	113390653	113390796	.	+	1	Parent=FBgn0261356.1.mrna1;Target=FBgn0261356.1 24 167 +
Chr2	stalkie_big_nohaplotig	CDS	113390844	113391022	.	+	1	Parent=FBgn0261356.1.mrna1;Target=FBgn0261356.1 168 346 +
Chr2	stalkie_big_nohaplotig	CDS	113391082	113391845	.	+	2	Parent=FBgn0261356.1.mrna1;Target=FBgn0261356.1 347 1110 +
Chr2	gffcl	locus	113394568	113396116	.	-	.	ID=RLOC_00020786;geneIDs=comp134658_c0_seq1.path1;transcripts=comp134658_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113394568	113396116	.	-	.	ID=comp134658_c0_seq1.mrna1;geneID=comp134658_c0_seq1.path1;Name=comp134658_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=597;mismatches=0;indels=0;unknowns=0;Target=comp134658_c0_seq1 177 293 .;locus=RLOC_00020786
Chr2	stalkie_big_nohaplotig	exon	113394568	113394886	100	-	.	Parent=comp134658_c0_seq1.mrna1;Target=comp134658_c0_seq1 1 319 -
Chr2	stalkie_big_nohaplotig	exon	113395839	113396116	100	-	.	Parent=comp134658_c0_seq1.mrna1;Target=comp134658_c0_seq1 320 597 -
Chr2	stalkie_big_nohaplotig	CDS	113394744	113394860	.	-	0	Parent=comp134658_c0_seq1.mrna1
Chr2	gffcl	locus	113401408	113411591	.	+	.	ID=RLOC_00020787;geneIDs=ORF1336.path1,comp154874_c0_seq1.path1,comp160566_c0_seq1.path1;transcripts=comp154874_c0_seq1.mrna1,comp160566_c0_seq1.mrna1,ORF1336.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113401408	113404813	.	+	.	ID=comp154874_c0_seq1.mrna1;geneID=comp154874_c0_seq1.path1;Name=comp154874_c0_seq1;Dir=sensecoverage=100.0;identity=99.1;matches=741;mismatches=6;indels=1;unknowns=0;locus=RLOC_00020787
Chr2	stalkie_big_nohaplotig	exon	113401408	113401692	99	+	.	Parent=comp154874_c0_seq1.mrna1;Target=comp154874_c0_seq1 1 285 +
Chr2	stalkie_big_nohaplotig	exon	113401763	113402120	98	+	.	Parent=comp154874_c0_seq1.mrna1;Target=comp154874_c0_seq1 286 644 +
Chr2	stalkie_big_nohaplotig	exon	113404710	113404813	99	+	.	Parent=comp154874_c0_seq1.mrna1;Target=comp154874_c0_seq1 645 748 +
Chr2	stalkie_big_nohaplotig	CDS	113401652	113401692	.	+	0	Parent=comp154874_c0_seq1.mrna1;Target=comp154874_c0_seq1 245 285 +
Chr2	stalkie_big_nohaplotig	CDS	113401763	113401792	.	+	1	Parent=comp154874_c0_seq1.mrna1;Target=comp154874_c0_seq1 286 316 +
Chr2	stalkie_big_nohaplotig	mRNA	113404572	113411591	.	+	.	ID=comp160566_c0_seq1.mrna1;geneID=comp160566_c0_seq1.path1;Name=comp160566_c0_seq1;Dir=sensecoverage=94.9;identity=94.8;matches=1589;mismatches=47;indels=40;unknowns=0;locus=RLOC_00020787
Chr2	stalkie_big_nohaplotig	exon	113404572	113404724	99	+	.	Parent=comp160566_c0_seq1.mrna1;Target=comp160566_c0_seq1 1 153 +
Chr2	stalkie_big_nohaplotig	exon	113404793	113405025	100	+	.	Parent=comp160566_c0_seq1.mrna1;Target=comp160566_c0_seq1 154 386 +
Chr2	stalkie_big_nohaplotig	exon	113405173	113405449	96	+	.	Parent=comp160566_c0_seq1.mrna1;Target=comp160566_c0_seq1 387 666 +
Chr2	stalkie_big_nohaplotig	exon	113410527	113411270	90	+	.	Parent=comp160566_c0_seq1.mrna1;Target=comp160566_c0_seq1 667 1381 +
Chr2	stalkie_big_nohaplotig	exon	113411330	113411591	96	+	.	Parent=comp160566_c0_seq1.mrna1;Target=comp160566_c0_seq1 1382 1643 +
Chr2	stalkie_big_nohaplotig	CDS	113404684	113404724	.	+	0	Parent=comp160566_c0_seq1.mrna1;Target=comp160566_c0_seq1 113 153 +
Chr2	stalkie_big_nohaplotig	CDS	113404793	113405025	.	+	1	Parent=comp160566_c0_seq1.mrna1;Target=comp160566_c0_seq1 154 386 +
Chr2	stalkie_big_nohaplotig	CDS	113405173	113405449	.	+	2	Parent=comp160566_c0_seq1.mrna1;Target=comp160566_c0_seq1 387 666 +
Chr2	stalkie_big_nohaplotig	CDS	113410527	113411099	.	+	1	Parent=comp160566_c0_seq1.mrna1;Target=comp160566_c0_seq1 667 1210 +
Chr2	stalkie_big_nohaplotig	mRNA	113404642	113411095	.	+	.	ID=ORF1336.mrna1;geneID=ORF1336.path1;Name=ORF1336;Dir=sensecoverage=99.8;identity=94.0;matches=1098;mismatches=31;indels=39;unknowns=0;locus=RLOC_00020787
Chr2	stalkie_big_nohaplotig	exon	113404642	113404724	98	+	.	Parent=ORF1336.mrna1;Target=ORF1336 1 83 +
Chr2	stalkie_big_nohaplotig	exon	113404793	113405025	100	+	.	Parent=ORF1336.mrna1;Target=ORF1336 84 316 +
Chr2	stalkie_big_nohaplotig	exon	113405173	113405475	96	+	.	Parent=ORF1336.mrna1;Target=ORF1336 317 622 +
Chr2	stalkie_big_nohaplotig	exon	113410553	113411095	89	+	.	Parent=ORF1336.mrna1;Target=ORF1336 623 1135 +
Chr2	stalkie_big_nohaplotig	CDS	113404642	113404724	.	+	0	Parent=ORF1336.mrna1;Target=ORF1336 1 83 +
Chr2	stalkie_big_nohaplotig	CDS	113404793	113405025	.	+	1	Parent=ORF1336.mrna1;Target=ORF1336 84 316 +
Chr2	stalkie_big_nohaplotig	CDS	113405173	113405475	.	+	2	Parent=ORF1336.mrna1;Target=ORF1336 317 622 +
Chr2	stalkie_big_nohaplotig	CDS	113410553	113411094	.	+	2	Parent=ORF1336.mrna1;Target=ORF1336 623 1134 +
Chr2	gffcl	locus	113408525	113410125	.	-	.	ID=RLOC_00020788;geneIDs=ORF669.path1;transcripts=ORF669.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113408525	113410125	.	-	.	ID=ORF669.mrna1;geneID=ORF669.path1;Name=ORF669;Dir=sensecoverage=100.0;identity=99.9;matches=1543;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020788
Chr2	stalkie_big_nohaplotig	exon	113408525	113409936	99	-	.	Parent=ORF669.mrna1;Target=ORF669 134 1545 +
Chr2	stalkie_big_nohaplotig	exon	113409993	113410125	100	-	.	Parent=ORF669.mrna1;Target=ORF669 1 133 +
Chr2	stalkie_big_nohaplotig	CDS	113408525	113409936	.	-	2	Parent=ORF669.mrna1;Target=ORF669 134 1545 +
Chr2	stalkie_big_nohaplotig	CDS	113409993	113410125	.	-	0	Parent=ORF669.mrna1;Target=ORF669 1 133 +
Chr2	gffcl	locus	113414668	113434712	.	.	.	ID=RLOC_00020789;geneIDs=FBgn0020439.1.path1,comp115876_c0_seq1.path1,comp118312_c0_seq1.path1,comp148422_c0_seq1.path1;transcripts=FBgn0020439.1.mrna1,comp115876_c0_seq1.mrna1,comp148422_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113414668	113434712	.	+	.	ID=FBgn0020439.1.mrna1;geneID=FBgn0020439.1.path1;Name=FBgn0020439.1;Dir=sensecoverage=100.0;identity=99.9;matches=1802;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020789
Chr2	stalkie_big_nohaplotig	exon	113414668	113414757	100	+	.	Parent=FBgn0020439.1.mrna1;Target=FBgn0020439.1 1 90 +
Chr2	stalkie_big_nohaplotig	exon	113423811	113423828	100	+	.	Parent=FBgn0020439.1.mrna1;Target=FBgn0020439.1 91 108 +
Chr2	stalkie_big_nohaplotig	exon	113424414	113424872	99	+	.	Parent=FBgn0020439.1.mrna1;Target=FBgn0020439.1 109 567 +
Chr2	stalkie_big_nohaplotig	exon	113425003	113425115	100	+	.	Parent=FBgn0020439.1.mrna1;Target=FBgn0020439.1 568 680 +
Chr2	stalkie_big_nohaplotig	exon	113425200	113425330	100	+	.	Parent=FBgn0020439.1.mrna1;Target=FBgn0020439.1 681 811 +
Chr2	stalkie_big_nohaplotig	exon	113433584	113433785	100	+	.	Parent=FBgn0020439.1.mrna1;Target=FBgn0020439.1 812 1013 +
Chr2	stalkie_big_nohaplotig	exon	113433851	113434140	100	+	.	Parent=FBgn0020439.1.mrna1;Target=FBgn0020439.1 1014 1303 +
Chr2	stalkie_big_nohaplotig	exon	113434213	113434712	100	+	.	Parent=FBgn0020439.1.mrna1;Target=FBgn0020439.1 1304 1803 +
Chr2	stalkie_big_nohaplotig	CDS	113414668	113414757	.	+	0	Parent=FBgn0020439.1.mrna1;Target=FBgn0020439.1 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	113423811	113423828	.	+	0	Parent=FBgn0020439.1.mrna1;Target=FBgn0020439.1 91 108 +
Chr2	stalkie_big_nohaplotig	CDS	113424414	113424872	.	+	0	Parent=FBgn0020439.1.mrna1;Target=FBgn0020439.1 109 567 +
Chr2	stalkie_big_nohaplotig	CDS	113425003	113425115	.	+	0	Parent=FBgn0020439.1.mrna1;Target=FBgn0020439.1 568 680 +
Chr2	stalkie_big_nohaplotig	CDS	113425200	113425330	.	+	1	Parent=FBgn0020439.1.mrna1;Target=FBgn0020439.1 681 811 +
Chr2	stalkie_big_nohaplotig	CDS	113433584	113433785	.	+	2	Parent=FBgn0020439.1.mrna1;Target=FBgn0020439.1 812 1013 +
Chr2	stalkie_big_nohaplotig	CDS	113433851	113434140	.	+	1	Parent=FBgn0020439.1.mrna1;Target=FBgn0020439.1 1014 1303 +
Chr2	stalkie_big_nohaplotig	CDS	113434213	113434712	.	+	2	Parent=FBgn0020439.1.mrna1;Target=FBgn0020439.1 1304 1803 +
Chr2	stalkie_big_nohaplotig	mRNA	113414734	113415076	.	+	.	ID=comp115876_c0_seq1.mrna1;geneID=comp115876_c0_seq1.path1;Name=comp115876_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=338;mismatches=5;indels=0;unknowns=0;Target=comp115876_c0_seq1 343 1 .;CDS_Target=comp115876_c0_seq1 264 187 .;locus=RLOC_00020789
Chr2	stalkie_big_nohaplotig	exon	113414734	113415076	98	+	.	Parent=comp115876_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113414920	113414997	.	+	0	Parent=comp115876_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113433004	113433602	.	-	.	ID=comp148422_c0_seq1.mrna1;geneID=comp148422_c0_seq1.path1;Name=comp148422_c0_seq1;Dir=indeterminatecoverage=98.0;identity=99.7;matches=598;mismatches=1;indels=1;unknowns=0;Target=comp148422_c0_seq1 600 1 .;CDS_Target=comp148422_c0_seq1 303 226 .;locus=RLOC_00020789
Chr2	stalkie_big_nohaplotig	exon	113433004	113433602	99	-	.	Parent=comp148422_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113433301	113433377	.	-	0	Parent=comp148422_c0_seq1.mrna1
Chr2	gffcl	locus	113417757	113418188	.	+	.	ID=RLOC_00020790;geneIDs=comp118964_c0_seq1.path1;transcripts=comp118964_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113417757	113418188	.	+	.	ID=comp118964_c0_seq1.mrna1;geneID=comp118964_c0_seq1.path1;Name=comp118964_c0_seq1;Dir=indeterminatecoverage=96.9;identity=99.8;matches=431;mismatches=1;indels=0;unknowns=0;Target=comp118964_c0_seq1 446 15 .;CDS_Target=comp118964_c0_seq1 383 294 .;locus=RLOC_00020790
Chr2	stalkie_big_nohaplotig	exon	113417757	113418188	99	+	.	Parent=comp118964_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113418036	113418125	.	+	0	Parent=comp118964_c0_seq1.mrna1
Chr2	gffcl	locus	113418217	113418638	.	+	.	ID=RLOC_00020791;geneIDs=comp116242_c0_seq1.path1;transcripts=comp116242_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113418217	113418638	.	+	.	ID=comp116242_c0_seq1.mrna1;geneID=comp116242_c0_seq1.path1;Name=comp116242_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=421;mismatches=1;indels=0;unknowns=0;Target=comp116242_c0_seq1 422 1 .;CDS_Target=comp116242_c0_seq1 79 2 .;locus=RLOC_00020791
Chr2	stalkie_big_nohaplotig	exon	113418217	113418638	99	+	.	Parent=comp116242_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113418218	113418295	.	+	0	Parent=comp116242_c0_seq1.mrna1
Chr2	gffcl	locus	113418875	113419376	.	-	.	ID=RLOC_00020792;geneIDs=comp147098_c0_seq1.path1;transcripts=comp147098_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113418875	113419376	.	-	.	ID=comp147098_c0_seq1.mrna1;geneID=comp147098_c0_seq1.path1;Name=comp147098_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=501;mismatches=1;indels=1;unknowns=0;Target=comp147098_c0_seq1 503 1 .;CDS_Target=comp147098_c0_seq1 99 1 .;locus=RLOC_00020792
Chr2	stalkie_big_nohaplotig	exon	113418875	113419376	99	-	.	Parent=comp147098_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113419278	113419376	.	-	0	Parent=comp147098_c0_seq1.mrna1
Chr2	gffcl	locus	113428097	113428632	.	-	.	ID=RLOC_00020793;geneIDs=comp120567_c0_seq1.path1;transcripts=comp120567_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113428097	113428632	.	-	.	ID=comp120567_c0_seq1.mrna1;geneID=comp120567_c0_seq1.path1;Name=comp120567_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=535;mismatches=1;indels=0;unknowns=0;Target=comp120567_c0_seq1 536 1 .;CDS_Target=comp120567_c0_seq1 70 2 .;locus=RLOC_00020793
Chr2	stalkie_big_nohaplotig	exon	113428097	113428632	99	-	.	Parent=comp120567_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113428563	113428631	.	-	0	Parent=comp120567_c0_seq1.mrna1
Chr2	gffcl	locus	113429047	113429817	.	+	.	ID=RLOC_00020794;geneIDs=comp117395_c0_seq1.path1;transcripts=comp117395_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113429047	113429817	.	+	.	ID=comp117395_c0_seq1.mrna1;geneID=comp117395_c0_seq1.path1;Name=comp117395_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.9;matches=757;mismatches=8;indels=8;unknowns=0;Target=comp117395_c0_seq1 767 1 .;CDS_Target=comp117395_c0_seq1 619 554 .;locus=RLOC_00020794
Chr2	stalkie_big_nohaplotig	exon	113429047	113429817	97	+	.	Parent=comp117395_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113429604	113429669	.	+	0	Parent=comp117395_c0_seq1.mrna1
Chr2	gffcl	locus	113430875	113432479	.	-	.	ID=RLOC_00020795;geneIDs=comp160962_c0_seq1.path1;transcripts=comp160962_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113430875	113432479	.	-	.	ID=comp160962_c0_seq1.mrna1;geneID=comp160962_c0_seq1.path1;Name=comp160962_c0_seq1;Dir=indeterminatecoverage=80.1;identity=98.1;matches=1575;mismatches=21;indels=10;unknowns=0;Target=comp160962_c0_seq1 1598 2 .;CDS_Target=comp160962_c0_seq1 867 721 .;locus=RLOC_00020795
Chr2	stalkie_big_nohaplotig	exon	113430875	113432479	98	-	.	Parent=comp160962_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113431606	113431752	.	-	0	Parent=comp160962_c0_seq1.mrna1
Chr2	gffcl	locus	113438558	113439183	.	+	.	ID=RLOC_00020796;geneIDs=FBgn0039291.1.path1;transcripts=FBgn0039291.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113438558	113439183	.	+	.	ID=FBgn0039291.1.mrna1;geneID=FBgn0039291.1.path1;Name=FBgn0039291.1;Dir=sensecoverage=100.0;identity=99.1;matches=562;mismatches=5;indels=0;unknowns=0;locus=RLOC_00020796
Chr2	stalkie_big_nohaplotig	exon	113438558	113438713	100	+	.	Parent=FBgn0039291.1.mrna1;Target=FBgn0039291.1 1 156 +
Chr2	stalkie_big_nohaplotig	exon	113438773	113439183	98	+	.	Parent=FBgn0039291.1.mrna1;Target=FBgn0039291.1 157 567 +
Chr2	stalkie_big_nohaplotig	CDS	113438558	113438713	.	+	0	Parent=FBgn0039291.1.mrna1;Target=FBgn0039291.1 1 156 +
Chr2	stalkie_big_nohaplotig	CDS	113438773	113439183	.	+	0	Parent=FBgn0039291.1.mrna1;Target=FBgn0039291.1 157 567 +
Chr2	gffcl	locus	113440664	113441448	.	-	.	ID=RLOC_00020797;geneIDs=comp158994_c0_seq1.path1;transcripts=comp158994_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113440664	113441448	.	-	.	ID=comp158994_c0_seq1.mrna1;geneID=comp158994_c0_seq1.path1;Name=comp158994_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.2;matches=780;mismatches=5;indels=1;unknowns=0;Target=comp158994_c0_seq1 788 3 .;CDS_Target=comp158994_c0_seq1 677 432 .;locus=RLOC_00020797
Chr2	stalkie_big_nohaplotig	exon	113440664	113441448	99	-	.	Parent=comp158994_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113440775	113441020	.	-	0	Parent=comp158994_c0_seq1.mrna1
Chr2	gffcl	locus	113441777	113442074	.	-	.	ID=RLOC_00020798;geneIDs=comp135938_c0_seq1.path1;transcripts=comp135938_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113441777	113442074	.	-	.	ID=comp135938_c0_seq1.mrna1;geneID=comp135938_c0_seq1.path1;Name=comp135938_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.7;matches=297;mismatches=1;indels=0;unknowns=0;Target=comp135938_c0_seq1 298 1 .;CDS_Target=comp135938_c0_seq1 184 122 .;locus=RLOC_00020798
Chr2	stalkie_big_nohaplotig	exon	113441777	113442074	99	-	.	Parent=comp135938_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113441891	113441953	.	-	0	Parent=comp135938_c0_seq1.mrna1
Chr2	gffcl	locus	113442319	113442881	.	+	.	ID=RLOC_00020799;geneIDs=comp153296_c0_seq1.path1;transcripts=comp153296_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113442319	113442881	.	+	.	ID=comp153296_c0_seq1.mrna1;geneID=comp153296_c0_seq1.path1;Name=comp153296_c0_seq1;Dir=indeterminatecoverage=90.5;identity=96.1;matches=548;mismatches=8;indels=14;unknowns=0;Target=comp153296_c0_seq1 622 60 .;CDS_Target=comp153296_c0_seq1 479 390 .;locus=RLOC_00020799
Chr2	stalkie_big_nohaplotig	exon	113442319	113442881	96	+	.	Parent=comp153296_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113442649	113442738	.	+	0	Parent=comp153296_c0_seq1.mrna1
Chr2	gffcl	locus	113443390	113444123	.	+	.	ID=RLOC_00020800;geneIDs=comp141438_c0_seq1.path1;transcripts=comp141438_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113443390	113444123	.	+	.	ID=comp141438_c0_seq1.mrna1;geneID=comp141438_c0_seq1.path1;Name=comp141438_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.9;matches=726;mismatches=8;indels=0;unknowns=0;Target=comp141438_c0_seq1 735 2 .;CDS_Target=comp141438_c0_seq1 611 450 .;locus=RLOC_00020800
Chr2	stalkie_big_nohaplotig	exon	113443390	113444123	98	+	.	Parent=comp141438_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113443838	113443999	.	+	0	Parent=comp141438_c0_seq1.mrna1
Chr2	gffcl	locus	113500294	113501095	.	+	.	ID=RLOC_00020802;geneIDs=comp148436_c1_seq1.path1;transcripts=comp148436_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113500294	113501095	.	+	.	ID=comp148436_c1_seq1.mrna1;geneID=comp148436_c1_seq1.path1;Name=comp148436_c1_seq1;Dir=sensecoverage=98.2;identity=100.0;matches=745;mismatches=0;indels=0;unknowns=0;Target=comp148436_c1_seq1 16 105 +;locus=RLOC_00020802
Chr2	stalkie_big_nohaplotig	exon	113500294	113500486	100	+	.	Parent=comp148436_c1_seq1.mrna1;Target=comp148436_c1_seq1 15 207 +
Chr2	stalkie_big_nohaplotig	exon	113500544	113501095	100	+	.	Parent=comp148436_c1_seq1.mrna1;Target=comp148436_c1_seq1 208 759 +
Chr2	stalkie_big_nohaplotig	CDS	113500295	113500384	.	+	0	Parent=comp148436_c1_seq1.mrna1
Chr2	gffcl	locus	113562613	113563147	.	+	.	ID=RLOC_00020804;geneIDs=comp159575_c0_seq1.path1;transcripts=comp159575_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113562613	113563147	.	+	.	ID=comp159575_c0_seq1.mrna1;geneID=comp159575_c0_seq1.path1;Name=comp159575_c0_seq1;Dir=indeterminatecoverage=59.1;identity=99.6;matches=533;mismatches=2;indels=0;unknowns=0;Target=comp159575_c0_seq1 544 10 .;CDS_Target=comp159575_c0_seq1 544 104 .;locus=RLOC_00020804
Chr2	stalkie_big_nohaplotig	exon	113562613	113563147	99	+	.	Parent=comp159575_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113562707	113563147	.	+	0	Parent=comp159575_c0_seq1.mrna1
Chr2	gffcl	locus	113645525	113670103	.	-	.	ID=RLOC_00020805;geneIDs=FBgn0022800.1.path2,comp161136_c1_seq1.path1;transcripts=FBgn0022800.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	113645525	113670103	.	-	.	ID=FBgn0022800.1.mrna2;geneID=FBgn0022800.1.path2;Name=FBgn0022800.1;Dir=sensecoverage=17.0;identity=100.0;matches=335;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020805
Chr2	stalkie_big_nohaplotig	exon	113645525	113645630	100	-	.	Parent=FBgn0022800.1.mrna2;Target=FBgn0022800.1 1869 1974 +
Chr2	stalkie_big_nohaplotig	exon	113648066	113648205	100	-	.	Parent=FBgn0022800.1.mrna2;Target=FBgn0022800.1 1729 1868 +
Chr2	stalkie_big_nohaplotig	exon	113670015	113670103	100	-	.	Parent=FBgn0022800.1.mrna2;Target=FBgn0022800.1 1640 1728 +
Chr2	stalkie_big_nohaplotig	CDS	113645525	113645630	.	-	0	Parent=FBgn0022800.1.mrna2;Target=FBgn0022800.1 1869 1974 +
Chr2	stalkie_big_nohaplotig	CDS	113648066	113648205	.	-	2	Parent=FBgn0022800.1.mrna2;Target=FBgn0022800.1 1729 1868 +
Chr2	stalkie_big_nohaplotig	CDS	113670015	113670103	.	-	1	Parent=FBgn0022800.1.mrna2;Target=FBgn0022800.1 1640 1728 +
Chr2	gffcl	locus	113709533	113710390	.	+	.	ID=RLOC_00020806;geneIDs=comp147757_c1_seq1.path1;transcripts=comp147757_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113709533	113710390	.	+	.	ID=comp147757_c1_seq1.mrna1;geneID=comp147757_c1_seq1.path1;Name=comp147757_c1_seq1;Dir=indeterminatecoverage=100.0;identity=90.5;matches=822;mismatches=35;indels=51;unknowns=0;Target=comp147757_c1_seq1 907 1 .;CDS_Target=comp147757_c1_seq1 463 359 .;locus=RLOC_00020806
Chr2	stalkie_big_nohaplotig	exon	113709533	113710390	90	+	.	Parent=comp147757_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113709891	113709992	.	+	0	Parent=comp147757_c1_seq1.mrna1
Chr2	gffcl	locus	113731284	113732601	.	-	.	ID=RLOC_00020807;geneIDs=ORF3156.path1;transcripts=ORF3156.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113731284	113732601	.	-	.	ID=ORF3156.mrna1;geneID=ORF3156.path1;Name=ORF3156;Dir=sensecoverage=98.4;identity=99.5;matches=746;mismatches=4;indels=0;unknowns=0;locus=RLOC_00020807
Chr2	stalkie_big_nohaplotig	exon	113731284	113731432	98	-	.	Parent=ORF3156.mrna1;Target=ORF3156 602 750 +
Chr2	stalkie_big_nohaplotig	exon	113731497	113731665	99	-	.	Parent=ORF3156.mrna1;Target=ORF3156 433 601 +
Chr2	stalkie_big_nohaplotig	exon	113731730	113732004	99	-	.	Parent=ORF3156.mrna1;Target=ORF3156 158 432 +
Chr2	stalkie_big_nohaplotig	exon	113732373	113732432	100	-	.	Parent=ORF3156.mrna1;Target=ORF3156 98 157 +
Chr2	stalkie_big_nohaplotig	exon	113732505	113732601	100	-	.	Parent=ORF3156.mrna1;Target=ORF3156 1 97 +
Chr2	stalkie_big_nohaplotig	CDS	113731284	113731432	.	-	2	Parent=ORF3156.mrna1;Target=ORF3156 602 750 +
Chr2	stalkie_big_nohaplotig	CDS	113731497	113731665	.	-	0	Parent=ORF3156.mrna1;Target=ORF3156 433 601 +
Chr2	stalkie_big_nohaplotig	CDS	113731730	113732004	.	-	2	Parent=ORF3156.mrna1;Target=ORF3156 158 432 +
Chr2	stalkie_big_nohaplotig	CDS	113732373	113732432	.	-	2	Parent=ORF3156.mrna1;Target=ORF3156 98 157 +
Chr2	stalkie_big_nohaplotig	CDS	113732505	113732601	.	-	0	Parent=ORF3156.mrna1;Target=ORF3156 1 97 +
Chr2	gffcl	locus	113739164	113747278	.	+	.	ID=RLOC_00020808;geneIDs=FBgn0038115.1.path1;transcripts=FBgn0038115.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113739164	113747278	.	+	.	ID=FBgn0038115.1.mrna1;geneID=FBgn0038115.1.path1;Name=FBgn0038115.1;Dir=sensecoverage=100.0;identity=99.7;matches=1460;mismatches=4;indels=0;unknowns=0;locus=RLOC_00020808
Chr2	stalkie_big_nohaplotig	exon	113739164	113739179	100	+	.	Parent=FBgn0038115.1.mrna1;Target=FBgn0038115.1 1 16 +
Chr2	stalkie_big_nohaplotig	exon	113745562	113745725	100	+	.	Parent=FBgn0038115.1.mrna1;Target=FBgn0038115.1 17 180 +
Chr2	stalkie_big_nohaplotig	exon	113745800	113746269	99	+	.	Parent=FBgn0038115.1.mrna1;Target=FBgn0038115.1 181 650 +
Chr2	stalkie_big_nohaplotig	exon	113746335	113746827	99	+	.	Parent=FBgn0038115.1.mrna1;Target=FBgn0038115.1 651 1143 +
Chr2	stalkie_big_nohaplotig	exon	113746892	113747017	100	+	.	Parent=FBgn0038115.1.mrna1;Target=FBgn0038115.1 1144 1269 +
Chr2	stalkie_big_nohaplotig	exon	113747084	113747278	99	+	.	Parent=FBgn0038115.1.mrna1;Target=FBgn0038115.1 1270 1464 +
Chr2	stalkie_big_nohaplotig	CDS	113739164	113739179	.	+	0	Parent=FBgn0038115.1.mrna1;Target=FBgn0038115.1 1 16 +
Chr2	stalkie_big_nohaplotig	CDS	113745562	113745725	.	+	2	Parent=FBgn0038115.1.mrna1;Target=FBgn0038115.1 17 180 +
Chr2	stalkie_big_nohaplotig	CDS	113745800	113746269	.	+	0	Parent=FBgn0038115.1.mrna1;Target=FBgn0038115.1 181 650 +
Chr2	stalkie_big_nohaplotig	CDS	113746335	113746827	.	+	1	Parent=FBgn0038115.1.mrna1;Target=FBgn0038115.1 651 1143 +
Chr2	stalkie_big_nohaplotig	CDS	113746892	113747017	.	+	0	Parent=FBgn0038115.1.mrna1;Target=FBgn0038115.1 1144 1269 +
Chr2	stalkie_big_nohaplotig	CDS	113747084	113747278	.	+	0	Parent=FBgn0038115.1.mrna1;Target=FBgn0038115.1 1270 1464 +
Chr2	gffcl	locus	113762525	113775320	.	-	.	ID=RLOC_00020809;geneIDs=FBgn0086368.1.path1;transcripts=FBgn0086368.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113762525	113775320	.	-	.	ID=FBgn0086368.1.mrna1;geneID=FBgn0086368.1.path1;Name=FBgn0086368.1;Dir=sensecoverage=100.0;identity=99.9;matches=1874;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020809
Chr2	stalkie_big_nohaplotig	exon	113762525	113762758	100	-	.	Parent=FBgn0086368.1.mrna1;Target=FBgn0086368.1 1642 1875 +
Chr2	stalkie_big_nohaplotig	exon	113765429	113765577	100	-	.	Parent=FBgn0086368.1.mrna1;Target=FBgn0086368.1 1493 1641 +
Chr2	stalkie_big_nohaplotig	exon	113767364	113767604	100	-	.	Parent=FBgn0086368.1.mrna1;Target=FBgn0086368.1 1252 1492 +
Chr2	stalkie_big_nohaplotig	exon	113767687	113767887	100	-	.	Parent=FBgn0086368.1.mrna1;Target=FBgn0086368.1 1051 1251 +
Chr2	stalkie_big_nohaplotig	exon	113770768	113771067	100	-	.	Parent=FBgn0086368.1.mrna1;Target=FBgn0086368.1 751 1050 +
Chr2	stalkie_big_nohaplotig	exon	113771271	113771545	100	-	.	Parent=FBgn0086368.1.mrna1;Target=FBgn0086368.1 476 750 +
Chr2	stalkie_big_nohaplotig	exon	113773668	113773776	100	-	.	Parent=FBgn0086368.1.mrna1;Target=FBgn0086368.1 367 475 +
Chr2	stalkie_big_nohaplotig	exon	113774508	113774612	100	-	.	Parent=FBgn0086368.1.mrna1;Target=FBgn0086368.1 262 366 +
Chr2	stalkie_big_nohaplotig	exon	113774678	113774762	100	-	.	Parent=FBgn0086368.1.mrna1;Target=FBgn0086368.1 177 261 +
Chr2	stalkie_big_nohaplotig	exon	113774838	113774921	100	-	.	Parent=FBgn0086368.1.mrna1;Target=FBgn0086368.1 93 176 +
Chr2	stalkie_big_nohaplotig	exon	113775229	113775320	98	-	.	Parent=FBgn0086368.1.mrna1;Target=FBgn0086368.1 1 92 +
Chr2	stalkie_big_nohaplotig	CDS	113762525	113762758	.	-	0	Parent=FBgn0086368.1.mrna1;Target=FBgn0086368.1 1642 1875 +
Chr2	stalkie_big_nohaplotig	CDS	113765429	113765577	.	-	2	Parent=FBgn0086368.1.mrna1;Target=FBgn0086368.1 1493 1641 +
Chr2	stalkie_big_nohaplotig	CDS	113767364	113767604	.	-	0	Parent=FBgn0086368.1.mrna1;Target=FBgn0086368.1 1252 1492 +
Chr2	stalkie_big_nohaplotig	CDS	113767687	113767887	.	-	0	Parent=FBgn0086368.1.mrna1;Target=FBgn0086368.1 1051 1251 +
Chr2	stalkie_big_nohaplotig	CDS	113770768	113771067	.	-	0	Parent=FBgn0086368.1.mrna1;Target=FBgn0086368.1 751 1050 +
Chr2	stalkie_big_nohaplotig	CDS	113771271	113771545	.	-	2	Parent=FBgn0086368.1.mrna1;Target=FBgn0086368.1 476 750 +
Chr2	stalkie_big_nohaplotig	CDS	113773668	113773776	.	-	0	Parent=FBgn0086368.1.mrna1;Target=FBgn0086368.1 367 475 +
Chr2	stalkie_big_nohaplotig	CDS	113774508	113774612	.	-	0	Parent=FBgn0086368.1.mrna1;Target=FBgn0086368.1 262 366 +
Chr2	stalkie_big_nohaplotig	CDS	113774678	113774762	.	-	1	Parent=FBgn0086368.1.mrna1;Target=FBgn0086368.1 177 261 +
Chr2	stalkie_big_nohaplotig	CDS	113774838	113774921	.	-	1	Parent=FBgn0086368.1.mrna1;Target=FBgn0086368.1 93 176 +
Chr2	stalkie_big_nohaplotig	CDS	113775229	113775320	.	-	0	Parent=FBgn0086368.1.mrna1;Target=FBgn0086368.1 1 92 +
Chr2	gffcl	locus	113782552	113782810	.	+	.	ID=RLOC_00020811;geneIDs=comp144048_c0_seq1.path1;transcripts=comp144048_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113782552	113782810	.	+	.	ID=comp144048_c0_seq1.mrna1;geneID=comp144048_c0_seq1.path1;Name=comp144048_c0_seq1;Dir=indeterminatecoverage=93.2;identity=99.6;matches=258;mismatches=1;indels=0;unknowns=0;Target=comp144048_c0_seq1 278 20 .;CDS_Target=comp144048_c0_seq1 162 103 .;locus=RLOC_00020811
Chr2	stalkie_big_nohaplotig	exon	113782552	113782810	99	+	.	Parent=comp144048_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113782635	113782694	.	+	0	Parent=comp144048_c0_seq1.mrna1
Chr2	gffcl	locus	113807990	113810266	.	-	.	ID=RLOC_00020813;geneIDs=comp112555_c0_seq1.path1;transcripts=comp112555_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113807990	113810266	.	-	.	ID=comp112555_c0_seq1.mrna1;geneID=comp112555_c0_seq1.path1;Name=comp112555_c0_seq1;Dir=sensecoverage=99.9;identity=97.4;matches=759;mismatches=18;indels=2;unknowns=0;Target=comp112555_c0_seq1 184 327 +;locus=RLOC_00020813
Chr2	stalkie_big_nohaplotig	exon	113807990	113808304	94	-	.	Parent=comp112555_c0_seq1.mrna1;Target=comp112555_c0_seq1 463 778 +
Chr2	stalkie_big_nohaplotig	exon	113809804	113810266	99	-	.	Parent=comp112555_c0_seq1.mrna1;Target=comp112555_c0_seq1 1 462 +
Chr2	stalkie_big_nohaplotig	CDS	113809939	113810083	.	-	0	Parent=comp112555_c0_seq1.mrna1
Chr2	gffcl	locus	113810341	113811032	.	+	.	ID=RLOC_00020814;geneIDs=comp105421_c0_seq1.path1;transcripts=comp105421_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113810341	113811032	.	+	.	ID=comp105421_c0_seq1.mrna1;geneID=comp105421_c0_seq1.path1;Name=comp105421_c0_seq1;Dir=indeterminatecoverage=96.5;identity=100.0;matches=692;mismatches=0;indels=0;unknowns=0;Target=comp105421_c0_seq1 716 25 .;CDS_Target=comp105421_c0_seq1 411 217 .;locus=RLOC_00020814
Chr2	stalkie_big_nohaplotig	exon	113810341	113811032	100	+	.	Parent=comp105421_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113810533	113810727	.	+	0	Parent=comp105421_c0_seq1.mrna1
Chr2	gffcl	locus	113813567	113814715	.	+	.	ID=RLOC_00020815;geneIDs=comp152366_c0_seq1.path1;transcripts=comp152366_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113813567	113814715	.	+	.	ID=comp152366_c0_seq1.mrna1;geneID=comp152366_c0_seq1.path1;Name=comp152366_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.5;matches=1148;mismatches=1;indels=5;unknowns=0;Target=comp152366_c0_seq1 1154 1 .;CDS_Target=comp152366_c0_seq1 400 71 .;locus=RLOC_00020815
Chr2	stalkie_big_nohaplotig	exon	113813567	113814715	99	+	.	Parent=comp152366_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	113813637	113813966	.	+	0	Parent=comp152366_c0_seq1.mrna1
Chr2	gffcl	locus	113952006	113952930	.	+	.	ID=RLOC_00020816;geneIDs=Dv_FBgn0210698.1.path1;transcripts=Dv_FBgn0210698.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113952006	113952930	.	+	.	ID=Dv_FBgn0210698.1.mrna1;geneID=Dv_FBgn0210698.1.path1;Name=Dv_FBgn0210698.1;Dir=sensecoverage=100.0;identity=99.6;matches=849;mismatches=3;indels=0;unknowns=0;locus=RLOC_00020816
Chr2	stalkie_big_nohaplotig	exon	113952006	113952060	100	+	.	Parent=Dv_FBgn0210698.1.mrna1;Target=Dv_FBgn0210698.1 1 55 +
Chr2	stalkie_big_nohaplotig	exon	113952134	113952930	99	+	.	Parent=Dv_FBgn0210698.1.mrna1;Target=Dv_FBgn0210698.1 56 852 +
Chr2	stalkie_big_nohaplotig	CDS	113952006	113952060	.	+	0	Parent=Dv_FBgn0210698.1.mrna1;Target=Dv_FBgn0210698.1 1 55 +
Chr2	stalkie_big_nohaplotig	CDS	113952134	113952930	.	+	2	Parent=Dv_FBgn0210698.1.mrna1;Target=Dv_FBgn0210698.1 56 852 +
Chr2	gffcl	locus	113959793	113961955	.	-	.	ID=RLOC_00020817;geneIDs=FBgn0037540.2.path2;transcripts=FBgn0037540.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	113959793	113961955	.	-	.	ID=FBgn0037540.2.mrna2;geneID=FBgn0037540.2.path2;Name=FBgn0037540.2;Dir=sensecoverage=100.0;identity=99.9;matches=2047;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020817
Chr2	stalkie_big_nohaplotig	exon	113959793	113960826	100	-	.	Parent=FBgn0037540.2.mrna2;Target=FBgn0037540.2 1016 2049 +
Chr2	stalkie_big_nohaplotig	exon	113960890	113961436	99	-	.	Parent=FBgn0037540.2.mrna2;Target=FBgn0037540.2 469 1015 +
Chr2	stalkie_big_nohaplotig	exon	113961488	113961955	99	-	.	Parent=FBgn0037540.2.mrna2;Target=FBgn0037540.2 1 468 +
Chr2	stalkie_big_nohaplotig	CDS	113959793	113960826	.	-	2	Parent=FBgn0037540.2.mrna2;Target=FBgn0037540.2 1016 2049 +
Chr2	stalkie_big_nohaplotig	CDS	113960890	113961436	.	-	0	Parent=FBgn0037540.2.mrna2;Target=FBgn0037540.2 469 1015 +
Chr2	stalkie_big_nohaplotig	CDS	113961488	113961955	.	-	0	Parent=FBgn0037540.2.mrna2;Target=FBgn0037540.2 1 468 +
Chr2	gffcl	locus	113970589	113972060	.	+	.	ID=RLOC_00020818;geneIDs=comp154739_c0_seq1.path1;transcripts=comp154739_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113970589	113972060	.	+	.	ID=comp154739_c0_seq1.mrna1;geneID=comp154739_c0_seq1.path1;Name=comp154739_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=1206;mismatches=5;indels=0;unknowns=0;locus=RLOC_00020818
Chr2	stalkie_big_nohaplotig	exon	113970589	113970854	98	+	.	Parent=comp154739_c0_seq1.mrna1;Target=comp154739_c0_seq1 946 1211 -
Chr2	stalkie_big_nohaplotig	exon	113970917	113971128	100	+	.	Parent=comp154739_c0_seq1.mrna1;Target=comp154739_c0_seq1 734 945 -
Chr2	stalkie_big_nohaplotig	exon	113971328	113972060	99	+	.	Parent=comp154739_c0_seq1.mrna1;Target=comp154739_c0_seq1 1 733 -
Chr2	stalkie_big_nohaplotig	CDS	113970837	113970854	.	+	0	Parent=comp154739_c0_seq1.mrna1;Target=comp154739_c0_seq1 946 963 .
Chr2	stalkie_big_nohaplotig	CDS	113970917	113971128	.	+	0	Parent=comp154739_c0_seq1.mrna1;Target=comp154739_c0_seq1 734 945 .
Chr2	stalkie_big_nohaplotig	CDS	113971328	113971472	.	+	1	Parent=comp154739_c0_seq1.mrna1;Target=comp154739_c0_seq1 589 733 .
Chr2	gffcl	locus	113987155	113988557	.	+	.	ID=RLOC_00020819;geneIDs=FBgn0046214.1.path1;transcripts=FBgn0046214.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113987155	113988557	.	+	.	ID=FBgn0046214.1.mrna1;geneID=FBgn0046214.1.path1;Name=FBgn0046214.1;Dir=sensecoverage=100.0;identity=99.8;matches=1135;mismatches=1;indels=1;unknowns=0;Target=FBgn0046214.1 3 188 +;locus=RLOC_00020819
Chr2	stalkie_big_nohaplotig	exon	113987155	113987709	99	+	.	Parent=FBgn0046214.1.mrna1;Target=FBgn0046214.1 1 556 +
Chr2	stalkie_big_nohaplotig	exon	113987977	113988557	100	+	.	Parent=FBgn0046214.1.mrna1;Target=FBgn0046214.1 557 1137 +
Chr2	stalkie_big_nohaplotig	CDS	113987157	113987341	.	+	0	Parent=FBgn0046214.1.mrna1
Chr2	gffcl	locus	113989007	113990961	.	-	.	ID=RLOC_00020820;geneIDs=FBgn0039280.1.path1,comp135538_c0_seq1.path1;transcripts=FBgn0039280.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113989194	113990961	.	-	.	ID=FBgn0039280.1.mrna1;geneID=FBgn0039280.1.path1;Name=FBgn0039280.1;Dir=sensecoverage=100.0;identity=99.8;matches=1326;mismatches=3;indels=0;unknowns=0;locus=RLOC_00020820
Chr2	stalkie_big_nohaplotig	exon	113989194	113989478	99	-	.	Parent=FBgn0039280.1.mrna1;Target=FBgn0039280.1 1045 1329 +
Chr2	stalkie_big_nohaplotig	exon	113989542	113989870	100	-	.	Parent=FBgn0039280.1.mrna1;Target=FBgn0039280.1 716 1044 +
Chr2	stalkie_big_nohaplotig	exon	113989919	113990209	99	-	.	Parent=FBgn0039280.1.mrna1;Target=FBgn0039280.1 425 715 +
Chr2	stalkie_big_nohaplotig	exon	113990327	113990618	99	-	.	Parent=FBgn0039280.1.mrna1;Target=FBgn0039280.1 133 424 +
Chr2	stalkie_big_nohaplotig	exon	113990830	113990961	100	-	.	Parent=FBgn0039280.1.mrna1;Target=FBgn0039280.1 1 132 +
Chr2	stalkie_big_nohaplotig	CDS	113989194	113989478	.	-	0	Parent=FBgn0039280.1.mrna1;Target=FBgn0039280.1 1045 1329 +
Chr2	stalkie_big_nohaplotig	CDS	113989542	113989870	.	-	2	Parent=FBgn0039280.1.mrna1;Target=FBgn0039280.1 716 1044 +
Chr2	stalkie_big_nohaplotig	CDS	113989919	113990209	.	-	2	Parent=FBgn0039280.1.mrna1;Target=FBgn0039280.1 425 715 +
Chr2	stalkie_big_nohaplotig	CDS	113990327	113990618	.	-	0	Parent=FBgn0039280.1.mrna1;Target=FBgn0039280.1 133 424 +
Chr2	stalkie_big_nohaplotig	CDS	113990830	113990961	.	-	0	Parent=FBgn0039280.1.mrna1;Target=FBgn0039280.1 1 132 +
Chr2	gffcl	locus	113992705	113995990	.	+	.	ID=RLOC_00020821;geneIDs=FBgn0259152.1.path1;transcripts=FBgn0259152.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113992705	113995990	.	+	.	ID=FBgn0259152.1.mrna1;geneID=FBgn0259152.1.path1;Name=FBgn0259152.1;Dir=sensecoverage=100.0;identity=99.8;matches=3037;mismatches=5;indels=0;unknowns=0;locus=RLOC_00020821
Chr2	stalkie_big_nohaplotig	exon	113992705	113992778	100	+	.	Parent=FBgn0259152.1.mrna1;Target=FBgn0259152.1 1 74 +
Chr2	stalkie_big_nohaplotig	exon	113992837	113993563	100	+	.	Parent=FBgn0259152.1.mrna1;Target=FBgn0259152.1 75 801 +
Chr2	stalkie_big_nohaplotig	exon	113993618	113994516	99	+	.	Parent=FBgn0259152.1.mrna1;Target=FBgn0259152.1 802 1700 +
Chr2	stalkie_big_nohaplotig	exon	113994591	113995736	100	+	.	Parent=FBgn0259152.1.mrna1;Target=FBgn0259152.1 1701 2846 +
Chr2	stalkie_big_nohaplotig	exon	113995795	113995990	100	+	.	Parent=FBgn0259152.1.mrna1;Target=FBgn0259152.1 2847 3042 +
Chr2	stalkie_big_nohaplotig	CDS	113992705	113992778	.	+	0	Parent=FBgn0259152.1.mrna1;Target=FBgn0259152.1 1 74 +
Chr2	stalkie_big_nohaplotig	CDS	113992837	113993563	.	+	1	Parent=FBgn0259152.1.mrna1;Target=FBgn0259152.1 75 801 +
Chr2	stalkie_big_nohaplotig	CDS	113993618	113994516	.	+	0	Parent=FBgn0259152.1.mrna1;Target=FBgn0259152.1 802 1700 +
Chr2	stalkie_big_nohaplotig	CDS	113994591	113995736	.	+	1	Parent=FBgn0259152.1.mrna1;Target=FBgn0259152.1 1701 2846 +
Chr2	stalkie_big_nohaplotig	CDS	113995795	113995990	.	+	1	Parent=FBgn0259152.1.mrna1;Target=FBgn0259152.1 2847 3042 +
Chr2	gffcl	locus	113999156	114010710	.	+	.	ID=RLOC_00020822;geneIDs=comp140641_c0_seq1.path1;transcripts=comp140641_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	113999156	114010710	.	+	.	ID=comp140641_c0_seq1.mrna1;geneID=comp140641_c0_seq1.path1;Name=comp140641_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=1136;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020822
Chr2	stalkie_big_nohaplotig	exon	113999156	113999353	100	+	.	Parent=comp140641_c0_seq1.mrna1;Target=comp140641_c0_seq1 1 198 +
Chr2	stalkie_big_nohaplotig	exon	114006140	114006926	100	+	.	Parent=comp140641_c0_seq1.mrna1;Target=comp140641_c0_seq1 199 985 +
Chr2	stalkie_big_nohaplotig	exon	114010560	114010710	100	+	.	Parent=comp140641_c0_seq1.mrna1;Target=comp140641_c0_seq1 986 1136 +
Chr2	stalkie_big_nohaplotig	CDS	114006556	114006926	.	+	0	Parent=comp140641_c0_seq1.mrna1;Target=comp140641_c0_seq1 615 985 +
Chr2	stalkie_big_nohaplotig	CDS	114010560	114010710	.	+	1	Parent=comp140641_c0_seq1.mrna1;Target=comp140641_c0_seq1 986 1136 +
Chr2	gffcl	locus	114011122	114017865	.	+	.	ID=RLOC_00020823;geneIDs=FBgn0039282.1.path1;transcripts=FBgn0039282.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114011122	114017865	.	+	.	ID=FBgn0039282.1.mrna1;geneID=FBgn0039282.1.path1;Name=FBgn0039282.1;Dir=sensecoverage=100.0;identity=99.9;matches=1904;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020823
Chr2	stalkie_big_nohaplotig	exon	114011122	114011644	99	+	.	Parent=FBgn0039282.1.mrna1;Target=FBgn0039282.1 1 523 +
Chr2	stalkie_big_nohaplotig	exon	114013145	114013323	100	+	.	Parent=FBgn0039282.1.mrna1;Target=FBgn0039282.1 524 702 +
Chr2	stalkie_big_nohaplotig	exon	114013420	114013766	100	+	.	Parent=FBgn0039282.1.mrna1;Target=FBgn0039282.1 703 1049 +
Chr2	stalkie_big_nohaplotig	exon	114013845	114014006	100	+	.	Parent=FBgn0039282.1.mrna1;Target=FBgn0039282.1 1050 1211 +
Chr2	stalkie_big_nohaplotig	exon	114014074	114014262	100	+	.	Parent=FBgn0039282.1.mrna1;Target=FBgn0039282.1 1212 1400 +
Chr2	stalkie_big_nohaplotig	exon	114014909	114015038	100	+	.	Parent=FBgn0039282.1.mrna1;Target=FBgn0039282.1 1401 1530 +
Chr2	stalkie_big_nohaplotig	exon	114015111	114015209	100	+	.	Parent=FBgn0039282.1.mrna1;Target=FBgn0039282.1 1531 1629 +
Chr2	stalkie_big_nohaplotig	exon	114015270	114015420	100	+	.	Parent=FBgn0039282.1.mrna1;Target=FBgn0039282.1 1630 1780 +
Chr2	stalkie_big_nohaplotig	exon	114017741	114017865	100	+	.	Parent=FBgn0039282.1.mrna1;Target=FBgn0039282.1 1781 1905 +
Chr2	stalkie_big_nohaplotig	CDS	114011122	114011644	.	+	0	Parent=FBgn0039282.1.mrna1;Target=FBgn0039282.1 1 523 +
Chr2	stalkie_big_nohaplotig	CDS	114013145	114013323	.	+	2	Parent=FBgn0039282.1.mrna1;Target=FBgn0039282.1 524 702 +
Chr2	stalkie_big_nohaplotig	CDS	114013420	114013766	.	+	0	Parent=FBgn0039282.1.mrna1;Target=FBgn0039282.1 703 1049 +
Chr2	stalkie_big_nohaplotig	CDS	114013845	114014006	.	+	1	Parent=FBgn0039282.1.mrna1;Target=FBgn0039282.1 1050 1211 +
Chr2	stalkie_big_nohaplotig	CDS	114014074	114014262	.	+	1	Parent=FBgn0039282.1.mrna1;Target=FBgn0039282.1 1212 1400 +
Chr2	stalkie_big_nohaplotig	CDS	114014909	114015038	.	+	1	Parent=FBgn0039282.1.mrna1;Target=FBgn0039282.1 1401 1530 +
Chr2	stalkie_big_nohaplotig	CDS	114015111	114015209	.	+	0	Parent=FBgn0039282.1.mrna1;Target=FBgn0039282.1 1531 1629 +
Chr2	stalkie_big_nohaplotig	CDS	114015270	114015420	.	+	0	Parent=FBgn0039282.1.mrna1;Target=FBgn0039282.1 1630 1780 +
Chr2	stalkie_big_nohaplotig	CDS	114017741	114017865	.	+	2	Parent=FBgn0039282.1.mrna1;Target=FBgn0039282.1 1781 1905 +
Chr2	gffcl	locus	114018142	114019300	.	-	.	ID=RLOC_00020824;geneIDs=comp131093_c0_seq1.path1;transcripts=comp131093_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114018142	114019300	.	-	.	ID=comp131093_c0_seq1.mrna1;geneID=comp131093_c0_seq1.path1;Name=comp131093_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=1159;mismatches=0;indels=0;unknowns=0;Target=comp131093_c0_seq1 1159 1 .;CDS_Target=comp131093_c0_seq1 712 578 .;locus=RLOC_00020824
Chr2	stalkie_big_nohaplotig	exon	114018142	114019300	100	-	.	Parent=comp131093_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114018589	114018723	.	-	0	Parent=comp131093_c0_seq1.mrna1
Chr2	gffcl	locus	114031739	114035233	.	+	.	ID=RLOC_00020825;geneIDs=FBgn0051510.2.path1;transcripts=FBgn0051510.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114031739	114035233	.	+	.	ID=FBgn0051510.2.mrna1;geneID=FBgn0051510.2.path1;Name=FBgn0051510.2;Dir=indeterminatecoverage=100.0;identity=99.7;matches=3483;mismatches=12;indels=0;unknowns=0;Target=FBgn0051510.2 3495 1 .;locus=RLOC_00020825
Chr2	stalkie_big_nohaplotig	exon	114031739	114035233	99	+	.	Parent=FBgn0051510.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114031739	114035233	.	+	0	Parent=FBgn0051510.2.mrna1
Chr2	gffcl	locus	114037016	114041170	.	+	.	ID=RLOC_00020826;geneIDs=FBgn0051510.1.path1;transcripts=FBgn0051510.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114037016	114041170	.	+	.	ID=FBgn0051510.1.mrna1;geneID=FBgn0051510.1.path1;Name=FBgn0051510.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=4155;mismatches=0;indels=0;unknowns=0;Target=FBgn0051510.1 4155 1 .;locus=RLOC_00020826
Chr2	stalkie_big_nohaplotig	exon	114037016	114041170	100	+	.	Parent=FBgn0051510.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114037016	114041170	.	+	0	Parent=FBgn0051510.1.mrna1
Chr2	gffcl	locus	114052416	114057968	.	+	.	ID=RLOC_00020827;geneIDs=FBgn0051108.1.path1;transcripts=FBgn0051108.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114052416	114057968	.	+	.	ID=FBgn0051108.1.mrna1;geneID=FBgn0051108.1.path1;Name=FBgn0051108.1;Dir=sensecoverage=98.8;identity=99.8;matches=2702;mismatches=6;indels=0;unknowns=0;locus=RLOC_00020827
Chr2	stalkie_big_nohaplotig	exon	114052416	114052463	100	+	.	Parent=FBgn0051108.1.mrna1;Target=FBgn0051108.1 35 82 +
Chr2	stalkie_big_nohaplotig	exon	114052601	114052727	100	+	.	Parent=FBgn0051108.1.mrna1;Target=FBgn0051108.1 83 209 +
Chr2	stalkie_big_nohaplotig	exon	114055283	114055849	99	+	.	Parent=FBgn0051108.1.mrna1;Target=FBgn0051108.1 210 776 +
Chr2	stalkie_big_nohaplotig	exon	114055941	114056154	98	+	.	Parent=FBgn0051108.1.mrna1;Target=FBgn0051108.1 777 990 +
Chr2	stalkie_big_nohaplotig	exon	114056217	114057968	99	+	.	Parent=FBgn0051108.1.mrna1;Target=FBgn0051108.1 991 2742 +
Chr2	stalkie_big_nohaplotig	CDS	114052418	114052463	.	+	0	Parent=FBgn0051108.1.mrna1;Target=FBgn0051108.1 37 82 +
Chr2	stalkie_big_nohaplotig	CDS	114052601	114052727	.	+	2	Parent=FBgn0051108.1.mrna1;Target=FBgn0051108.1 83 209 +
Chr2	stalkie_big_nohaplotig	CDS	114055283	114055849	.	+	1	Parent=FBgn0051108.1.mrna1;Target=FBgn0051108.1 210 776 +
Chr2	stalkie_big_nohaplotig	CDS	114055941	114056154	.	+	1	Parent=FBgn0051108.1.mrna1;Target=FBgn0051108.1 777 990 +
Chr2	stalkie_big_nohaplotig	CDS	114056217	114057968	.	+	0	Parent=FBgn0051108.1.mrna1;Target=FBgn0051108.1 991 2742 +
Chr2	gffcl	locus	114060457	114061388	.	-	.	ID=RLOC_00020828;geneIDs=comp156513_c0_seq1.path1;transcripts=comp156513_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114060457	114061388	.	-	.	ID=comp156513_c0_seq1.mrna1;geneID=comp156513_c0_seq1.path1;Name=comp156513_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=922;mismatches=10;indels=0;unknowns=0;Target=comp156513_c0_seq1 932 1 .;CDS_Target=comp156513_c0_seq1 647 555 .;locus=RLOC_00020828
Chr2	stalkie_big_nohaplotig	exon	114060457	114061388	98	-	.	Parent=comp156513_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114060742	114060834	.	-	0	Parent=comp156513_c0_seq1.mrna1
Chr2	gffcl	locus	114062296	114062681	.	-	.	ID=RLOC_00020829;geneIDs=comp515979_c0_seq1.path1;transcripts=comp515979_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114062296	114062681	.	-	.	ID=comp515979_c0_seq1.mrna1;geneID=comp515979_c0_seq1.path1;Name=comp515979_c0_seq1;Dir=indeterminatecoverage=93.9;identity=99.5;matches=384;mismatches=2;indels=0;unknowns=0;Target=comp515979_c0_seq1 411 26 .;CDS_Target=comp515979_c0_seq1 95 27 .;locus=RLOC_00020829
Chr2	stalkie_big_nohaplotig	exon	114062296	114062681	99	-	.	Parent=comp515979_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114062612	114062680	.	-	0	Parent=comp515979_c0_seq1.mrna1
Chr2	gffcl	locus	114065439	114069282	.	+	.	ID=RLOC_00020830;geneIDs=FBgn0039277.1.path1,comp162924_c0_seq1.path1;transcripts=FBgn0039277.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114065859	114069282	.	+	.	ID=FBgn0039277.1.mrna1;geneID=FBgn0039277.1.path1;Name=FBgn0039277.1;Dir=sensecoverage=100.0;identity=99.7;matches=2303;mismatches=7;indels=0;unknowns=0;locus=RLOC_00020830
Chr2	stalkie_big_nohaplotig	exon	114065859	114066155	99	+	.	Parent=FBgn0039277.1.mrna1;Target=FBgn0039277.1 1 297 +
Chr2	stalkie_big_nohaplotig	exon	114066221	114066617	100	+	.	Parent=FBgn0039277.1.mrna1;Target=FBgn0039277.1 298 694 +
Chr2	stalkie_big_nohaplotig	exon	114066686	114066978	100	+	.	Parent=FBgn0039277.1.mrna1;Target=FBgn0039277.1 695 987 +
Chr2	stalkie_big_nohaplotig	exon	114067031	114067198	100	+	.	Parent=FBgn0039277.1.mrna1;Target=FBgn0039277.1 988 1155 +
Chr2	stalkie_big_nohaplotig	exon	114067818	114067901	100	+	.	Parent=FBgn0039277.1.mrna1;Target=FBgn0039277.1 1156 1239 +
Chr2	stalkie_big_nohaplotig	exon	114067962	114068237	99	+	.	Parent=FBgn0039277.1.mrna1;Target=FBgn0039277.1 1240 1515 +
Chr2	stalkie_big_nohaplotig	exon	114068301	114068557	99	+	.	Parent=FBgn0039277.1.mrna1;Target=FBgn0039277.1 1516 1772 +
Chr2	stalkie_big_nohaplotig	exon	114068621	114068676	100	+	.	Parent=FBgn0039277.1.mrna1;Target=FBgn0039277.1 1773 1828 +
Chr2	stalkie_big_nohaplotig	exon	114068746	114069130	99	+	.	Parent=FBgn0039277.1.mrna1;Target=FBgn0039277.1 1829 2213 +
Chr2	stalkie_big_nohaplotig	exon	114069186	114069282	100	+	.	Parent=FBgn0039277.1.mrna1;Target=FBgn0039277.1 2214 2310 +
Chr2	stalkie_big_nohaplotig	CDS	114065859	114066155	.	+	0	Parent=FBgn0039277.1.mrna1;Target=FBgn0039277.1 1 297 +
Chr2	stalkie_big_nohaplotig	CDS	114066221	114066617	.	+	0	Parent=FBgn0039277.1.mrna1;Target=FBgn0039277.1 298 694 +
Chr2	stalkie_big_nohaplotig	CDS	114066686	114066978	.	+	2	Parent=FBgn0039277.1.mrna1;Target=FBgn0039277.1 695 987 +
Chr2	stalkie_big_nohaplotig	CDS	114067031	114067198	.	+	0	Parent=FBgn0039277.1.mrna1;Target=FBgn0039277.1 988 1155 +
Chr2	stalkie_big_nohaplotig	CDS	114067818	114067901	.	+	0	Parent=FBgn0039277.1.mrna1;Target=FBgn0039277.1 1156 1239 +
Chr2	stalkie_big_nohaplotig	CDS	114067962	114068237	.	+	0	Parent=FBgn0039277.1.mrna1;Target=FBgn0039277.1 1240 1515 +
Chr2	stalkie_big_nohaplotig	CDS	114068301	114068557	.	+	0	Parent=FBgn0039277.1.mrna1;Target=FBgn0039277.1 1516 1772 +
Chr2	stalkie_big_nohaplotig	CDS	114068621	114068676	.	+	1	Parent=FBgn0039277.1.mrna1;Target=FBgn0039277.1 1773 1828 +
Chr2	stalkie_big_nohaplotig	CDS	114068746	114069130	.	+	2	Parent=FBgn0039277.1.mrna1;Target=FBgn0039277.1 1829 2213 +
Chr2	stalkie_big_nohaplotig	CDS	114069186	114069282	.	+	1	Parent=FBgn0039277.1.mrna1;Target=FBgn0039277.1 2214 2310 +
Chr2	gffcl	locus	114070471	114070787	.	+	.	ID=RLOC_00020831;geneIDs=comp130815_c0_seq1.path1;transcripts=comp130815_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114070471	114070787	.	+	.	ID=comp130815_c0_seq1.mrna1;geneID=comp130815_c0_seq1.path1;Name=comp130815_c0_seq1;Dir=indeterminatecoverage=97.5;identity=99.1;matches=315;mismatches=2;indels=1;unknowns=0;Target=comp130815_c0_seq1 325 8 .;CDS_Target=comp130815_c0_seq1 117 10 .;locus=RLOC_00020831
Chr2	stalkie_big_nohaplotig	exon	114070471	114070787	99	+	.	Parent=comp130815_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114070473	114070579	.	+	0	Parent=comp130815_c0_seq1.mrna1
Chr2	gffcl	locus	114073673	114081078	.	+	.	ID=RLOC_00020832;geneIDs=FBgn0054027.1.path1;transcripts=FBgn0054027.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114073673	114081078	.	+	.	ID=FBgn0054027.1.mrna1;geneID=FBgn0054027.1.path1;Name=FBgn0054027.1;Dir=sensecoverage=100.0;identity=99.7;matches=6269;mismatches=7;indels=12;unknowns=0;locus=RLOC_00020832
Chr2	stalkie_big_nohaplotig	exon	114073673	114074065	100	+	.	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 1 393 +
Chr2	stalkie_big_nohaplotig	exon	114074132	114074258	100	+	.	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 394 520 +
Chr2	stalkie_big_nohaplotig	exon	114074322	114075583	99	+	.	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 521 1782 +
Chr2	stalkie_big_nohaplotig	exon	114075640	114075978	100	+	.	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 1783 2121 +
Chr2	stalkie_big_nohaplotig	exon	114076038	114076348	100	+	.	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 2122 2432 +
Chr2	stalkie_big_nohaplotig	exon	114076510	114077153	100	+	.	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 2433 3076 +
Chr2	stalkie_big_nohaplotig	exon	114077240	114077840	100	+	.	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 3077 3677 +
Chr2	stalkie_big_nohaplotig	exon	114077899	114078003	100	+	.	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 3678 3782 +
Chr2	stalkie_big_nohaplotig	exon	114078055	114078206	100	+	.	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 3783 3934 +
Chr2	stalkie_big_nohaplotig	exon	114078265	114078630	100	+	.	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 3935 4300 +
Chr2	stalkie_big_nohaplotig	exon	114078705	114079022	99	+	.	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 4301 4618 +
Chr2	stalkie_big_nohaplotig	exon	114079090	114079497	100	+	.	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 4619 5026 +
Chr2	stalkie_big_nohaplotig	exon	114079567	114079663	100	+	.	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 5027 5123 +
Chr2	stalkie_big_nohaplotig	exon	114079742	114079931	100	+	.	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 5124 5313 +
Chr2	stalkie_big_nohaplotig	exon	114080007	114080207	100	+	.	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 5314 5514 +
Chr2	stalkie_big_nohaplotig	exon	114080259	114080498	93	+	.	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 5515 5766 +
Chr2	stalkie_big_nohaplotig	exon	114080557	114081078	99	+	.	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 5767 6288 +
Chr2	stalkie_big_nohaplotig	CDS	114073673	114074065	.	+	0	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 1 393 +
Chr2	stalkie_big_nohaplotig	CDS	114074132	114074258	.	+	0	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 394 520 +
Chr2	stalkie_big_nohaplotig	CDS	114074322	114075583	.	+	2	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 521 1782 +
Chr2	stalkie_big_nohaplotig	CDS	114075640	114075978	.	+	0	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 1783 2121 +
Chr2	stalkie_big_nohaplotig	CDS	114076038	114076348	.	+	0	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 2122 2432 +
Chr2	stalkie_big_nohaplotig	CDS	114076510	114077153	.	+	1	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 2433 3076 +
Chr2	stalkie_big_nohaplotig	CDS	114077240	114077840	.	+	2	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 3077 3677 +
Chr2	stalkie_big_nohaplotig	CDS	114077899	114078003	.	+	1	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 3678 3782 +
Chr2	stalkie_big_nohaplotig	CDS	114078055	114078206	.	+	1	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 3783 3934 +
Chr2	stalkie_big_nohaplotig	CDS	114078265	114078630	.	+	2	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 3935 4300 +
Chr2	stalkie_big_nohaplotig	CDS	114078705	114079022	.	+	2	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 4301 4618 +
Chr2	stalkie_big_nohaplotig	CDS	114079090	114079497	.	+	2	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 4619 5026 +
Chr2	stalkie_big_nohaplotig	CDS	114079567	114079663	.	+	2	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 5027 5123 +
Chr2	stalkie_big_nohaplotig	CDS	114079742	114079931	.	+	1	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 5124 5313 +
Chr2	stalkie_big_nohaplotig	CDS	114080007	114080207	.	+	0	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 5314 5514 +
Chr2	stalkie_big_nohaplotig	CDS	114080259	114080498	.	+	0	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 5515 5766 +
Chr2	stalkie_big_nohaplotig	CDS	114080557	114081078	.	+	0	Parent=FBgn0054027.1.mrna1;Target=FBgn0054027.1 5767 6288 +
Chr2	gffcl	locus	114104880	114126719	.	+	.	ID=RLOC_00020833;geneIDs=comp163423_c1_seq1.path1;transcripts=comp163423_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114104880	114126719	.	+	.	ID=comp163423_c1_seq1.mrna1;geneID=comp163423_c1_seq1.path1;Name=comp163423_c1_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=2567;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020833
Chr2	stalkie_big_nohaplotig	exon	114104880	114106061	100	+	.	Parent=comp163423_c1_seq1.mrna1;Target=comp163423_c1_seq1 2 1183 +
Chr2	stalkie_big_nohaplotig	exon	114122564	114122922	100	+	.	Parent=comp163423_c1_seq1.mrna1;Target=comp163423_c1_seq1 1184 1542 +
Chr2	stalkie_big_nohaplotig	exon	114123000	114123141	100	+	.	Parent=comp163423_c1_seq1.mrna1;Target=comp163423_c1_seq1 1543 1684 +
Chr2	stalkie_big_nohaplotig	exon	114123204	114123338	100	+	.	Parent=comp163423_c1_seq1.mrna1;Target=comp163423_c1_seq1 1685 1819 +
Chr2	stalkie_big_nohaplotig	exon	114125971	114126719	100	+	.	Parent=comp163423_c1_seq1.mrna1;Target=comp163423_c1_seq1 1820 2568 +
Chr2	stalkie_big_nohaplotig	CDS	114122629	114122922	.	+	0	Parent=comp163423_c1_seq1.mrna1;Target=comp163423_c1_seq1 1249 1542 +
Chr2	stalkie_big_nohaplotig	CDS	114123000	114123141	.	+	0	Parent=comp163423_c1_seq1.mrna1;Target=comp163423_c1_seq1 1543 1684 +
Chr2	stalkie_big_nohaplotig	CDS	114123204	114123338	.	+	2	Parent=comp163423_c1_seq1.mrna1;Target=comp163423_c1_seq1 1685 1819 +
Chr2	stalkie_big_nohaplotig	CDS	114125971	114126719	.	+	2	Parent=comp163423_c1_seq1.mrna1;Target=comp163423_c1_seq1 1820 2568 +
Chr2	gffcl	locus	114138952	114140100	.	+	.	ID=RLOC_00020834;geneIDs=CPIJ007364.path1;transcripts=CPIJ007364.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114138952	114140100	.	+	.	ID=CPIJ007364.mrna1;geneID=CPIJ007364.path1;Name=CPIJ007364;Dir=indeterminatecoverage=99.7;identity=99.7;matches=1145;mismatches=4;indels=0;unknowns=0;Target=CPIJ007364 1149 1 .;locus=RLOC_00020834
Chr2	stalkie_big_nohaplotig	exon	114138952	114140100	99	+	.	Parent=CPIJ007364.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114138952	114140100	.	+	0	Parent=CPIJ007364.mrna1
Chr2	gffcl	locus	114143523	114143870	.	-	.	ID=RLOC_00020836;geneIDs=comp153517_c0_seq1.path1;transcripts=comp153517_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114143523	114143870	.	-	.	ID=comp153517_c0_seq1.mrna1;geneID=comp153517_c0_seq1.path1;Name=comp153517_c0_seq1;Dir=indeterminatecoverage=93.5;identity=98.6;matches=343;mismatches=5;indels=0;unknowns=0;Target=comp153517_c0_seq1 348 1 .;CDS_Target=comp153517_c0_seq1 136 2 .;locus=RLOC_00020836
Chr2	stalkie_big_nohaplotig	exon	114143523	114143870	98	-	.	Parent=comp153517_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114143735	114143869	.	-	0	Parent=comp153517_c0_seq1.mrna1
Chr2	gffcl	locus	114144937	114145420	.	+	.	ID=RLOC_00020837;geneIDs=comp147252_c0_seq1.path1;transcripts=comp147252_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114144937	114145420	.	+	.	ID=comp147252_c0_seq1.mrna1;geneID=comp147252_c0_seq1.path1;Name=comp147252_c0_seq1;Dir=indeterminatecoverage=96.6;identity=98.0;matches=479;mismatches=4;indels=6;unknowns=0;Target=comp147252_c0_seq1 505 18 .;CDS_Target=comp147252_c0_seq1 504 370 .;locus=RLOC_00020837
Chr2	stalkie_big_nohaplotig	exon	114144937	114145420	97	+	.	Parent=comp147252_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114145285	114145419	.	+	0	Parent=comp147252_c0_seq1.mrna1
Chr2	gffcl	locus	114215138	114215930	.	+	.	ID=RLOC_00020839;geneIDs=comp135404_c0_seq1.path1;transcripts=comp135404_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114215138	114215930	.	+	.	ID=comp135404_c0_seq1.mrna1;geneID=comp135404_c0_seq1.path1;Name=comp135404_c0_seq1;Dir=indeterminatecoverage=98.0;identity=99.0;matches=785;mismatches=0;indels=8;unknowns=0;Target=comp135404_c0_seq1 785 1 .;CDS_Target=comp135404_c0_seq1 286 2 .;locus=RLOC_00020839
Chr2	stalkie_big_nohaplotig	exon	114215138	114215930	98	+	.	Parent=comp135404_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114215139	114215431	.	+	0	Parent=comp135404_c0_seq1.mrna1
Chr2	gffcl	locus	114220047	114286691	.	+	.	ID=RLOC_00020840;geneIDs=FBgn0039266.1.path1;transcripts=FBgn0039266.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114220047	114286691	.	+	.	ID=FBgn0039266.1.mrna1;geneID=FBgn0039266.1.path1;Name=FBgn0039266.1;Dir=sensecoverage=100.0;identity=99.9;matches=878;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020840
Chr2	stalkie_big_nohaplotig	exon	114220047	114220209	100	+	.	Parent=FBgn0039266.1.mrna1;Target=FBgn0039266.1 1 163 +
Chr2	stalkie_big_nohaplotig	exon	114229309	114229371	100	+	.	Parent=FBgn0039266.1.mrna1;Target=FBgn0039266.1 164 226 +
Chr2	stalkie_big_nohaplotig	exon	114232184	114232213	100	+	.	Parent=FBgn0039266.1.mrna1;Target=FBgn0039266.1 227 256 +
Chr2	stalkie_big_nohaplotig	exon	114254363	114254456	98	+	.	Parent=FBgn0039266.1.mrna1;Target=FBgn0039266.1 257 350 +
Chr2	stalkie_big_nohaplotig	exon	114277413	114277788	100	+	.	Parent=FBgn0039266.1.mrna1;Target=FBgn0039266.1 351 726 +
Chr2	stalkie_big_nohaplotig	exon	114286539	114286691	100	+	.	Parent=FBgn0039266.1.mrna1;Target=FBgn0039266.1 727 879 +
Chr2	stalkie_big_nohaplotig	CDS	114220047	114220209	.	+	0	Parent=FBgn0039266.1.mrna1;Target=FBgn0039266.1 1 163 +
Chr2	stalkie_big_nohaplotig	CDS	114229309	114229371	.	+	2	Parent=FBgn0039266.1.mrna1;Target=FBgn0039266.1 164 226 +
Chr2	stalkie_big_nohaplotig	CDS	114232184	114232213	.	+	2	Parent=FBgn0039266.1.mrna1;Target=FBgn0039266.1 227 256 +
Chr2	stalkie_big_nohaplotig	CDS	114254363	114254456	.	+	2	Parent=FBgn0039266.1.mrna1;Target=FBgn0039266.1 257 350 +
Chr2	stalkie_big_nohaplotig	CDS	114277413	114277788	.	+	1	Parent=FBgn0039266.1.mrna1;Target=FBgn0039266.1 351 726 +
Chr2	stalkie_big_nohaplotig	CDS	114286539	114286691	.	+	0	Parent=FBgn0039266.1.mrna1;Target=FBgn0039266.1 727 879 +
Chr2	gffcl	locus	114279310	114280980	.	-	.	ID=RLOC_00020841;geneIDs=comp150745_c2_seq1.path1;transcripts=comp150745_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114279310	114280980	.	-	.	ID=comp150745_c2_seq1.mrna1;geneID=comp150745_c2_seq1.path1;Name=comp150745_c2_seq1;Dir=indeterminatecoverage=99.2;identity=97.1;matches=1661;mismatches=6;indels=44;unknowns=0;Target=comp150745_c2_seq1 1709 3 .;CDS_Target=comp150745_c2_seq1 272 3 .;locus=RLOC_00020841
Chr2	stalkie_big_nohaplotig	exon	114279310	114280980	97	-	.	Parent=comp150745_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114280711	114280980	.	-	0	Parent=comp150745_c2_seq1.mrna1
Chr2	gffcl	locus	114283362	114284062	.	+	.	ID=RLOC_00020842;geneIDs=comp150630_c0_seq1.path1;transcripts=comp150630_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114283362	114284062	.	+	.	ID=comp150630_c0_seq1.mrna1;geneID=comp150630_c0_seq1.path1;Name=comp150630_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.1;matches=696;mismatches=5;indels=1;unknowns=0;Target=comp150630_c0_seq1 704 3 .;CDS_Target=comp150630_c0_seq1 277 191 .;locus=RLOC_00020842
Chr2	stalkie_big_nohaplotig	exon	114283362	114284062	99	+	.	Parent=comp150630_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114283550	114283636	.	+	0	Parent=comp150630_c0_seq1.mrna1
Chr2	gffcl	locus	114336171	114336969	.	+	.	ID=RLOC_00020843;geneIDs=comp163475_c0_seq1.path3;transcripts=comp163475_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	114336171	114336969	.	+	.	ID=comp163475_c0_seq1.mrna3;geneID=comp163475_c0_seq1.path3;Name=comp163475_c0_seq1;Dir=indeterminatecoverage=62.5;identity=98.0;matches=783;mismatches=12;indels=4;unknowns=0;Target=comp163475_c0_seq1 795 1 .;CDS_Target=comp163475_c0_seq1 330 109 .;locus=RLOC_00020843
Chr2	stalkie_big_nohaplotig	exon	114336171	114336969	97	+	.	Parent=comp163475_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	CDS	114336279	114336500	.	+	0	Parent=comp163475_c0_seq1.mrna3
Chr2	gffcl	locus	114423849	114424883	.	+	.	ID=RLOC_00020844;geneIDs=FBgn0004897.2.path1;transcripts=FBgn0004897.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114423849	114424883	.	+	.	ID=FBgn0004897.2.mrna1;geneID=FBgn0004897.2.path1;Name=FBgn0004897.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1035;mismatches=0;indels=0;unknowns=0;Target=FBgn0004897.2 1035 1 .;locus=RLOC_00020844
Chr2	stalkie_big_nohaplotig	exon	114423849	114424883	100	+	.	Parent=FBgn0004897.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114423849	114424883	.	+	0	Parent=FBgn0004897.2.mrna1
Chr2	gffcl	locus	114497336	114498864	.	+	.	ID=RLOC_00020845;geneIDs=FBgn0053096.1.path1;transcripts=FBgn0053096.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114497336	114498864	.	+	.	ID=FBgn0053096.1.mrna1;geneID=FBgn0053096.1.path1;Name=FBgn0053096.1;Dir=sensecoverage=100.0;identity=99.9;matches=923;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020845
Chr2	stalkie_big_nohaplotig	exon	114497336	114497865	100	+	.	Parent=FBgn0053096.1.mrna1;Target=FBgn0053096.1 1 530 +
Chr2	stalkie_big_nohaplotig	exon	114497928	114498107	99	+	.	Parent=FBgn0053096.1.mrna1;Target=FBgn0053096.1 531 710 +
Chr2	stalkie_big_nohaplotig	exon	114498165	114498297	100	+	.	Parent=FBgn0053096.1.mrna1;Target=FBgn0053096.1 711 843 +
Chr2	stalkie_big_nohaplotig	exon	114498784	114498864	100	+	.	Parent=FBgn0053096.1.mrna1;Target=FBgn0053096.1 844 924 +
Chr2	stalkie_big_nohaplotig	CDS	114497336	114497865	.	+	0	Parent=FBgn0053096.1.mrna1;Target=FBgn0053096.1 1 530 +
Chr2	stalkie_big_nohaplotig	CDS	114497928	114498107	.	+	1	Parent=FBgn0053096.1.mrna1;Target=FBgn0053096.1 531 710 +
Chr2	stalkie_big_nohaplotig	CDS	114498165	114498297	.	+	1	Parent=FBgn0053096.1.mrna1;Target=FBgn0053096.1 711 843 +
Chr2	stalkie_big_nohaplotig	CDS	114498784	114498864	.	+	0	Parent=FBgn0053096.1.mrna1;Target=FBgn0053096.1 844 924 +
Chr2	gffcl	locus	114503076	114503450	.	-	.	ID=RLOC_00020846;geneIDs=comp114927_c0_seq1.path1;transcripts=comp114927_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114503076	114503450	.	-	.	ID=comp114927_c0_seq1.mrna1;geneID=comp114927_c0_seq1.path1;Name=comp114927_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=375;mismatches=0;indels=0;unknowns=0;Target=comp114927_c0_seq1 375 1 .;CDS_Target=comp114927_c0_seq1 250 158 .;locus=RLOC_00020846
Chr2	stalkie_big_nohaplotig	exon	114503076	114503450	100	-	.	Parent=comp114927_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114503201	114503293	.	-	0	Parent=comp114927_c0_seq1.mrna1
Chr2	gffcl	locus	114517813	114519465	.	-	.	ID=RLOC_00020847;geneIDs=FBgn0041250.1.path1;transcripts=FBgn0041250.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114517813	114519465	.	-	.	ID=FBgn0041250.1.mrna1;geneID=FBgn0041250.1.path1;Name=FBgn0041250.1;Dir=sensecoverage=100.0;identity=99.2;matches=824;mismatches=7;indels=0;unknowns=0;locus=RLOC_00020847
Chr2	stalkie_big_nohaplotig	exon	114517813	114517884	100	-	.	Parent=FBgn0041250.1.mrna1;Target=FBgn0041250.1 760 831 +
Chr2	stalkie_big_nohaplotig	exon	114518158	114518485	99	-	.	Parent=FBgn0041250.1.mrna1;Target=FBgn0041250.1 432 759 +
Chr2	stalkie_big_nohaplotig	exon	114518553	114518680	100	-	.	Parent=FBgn0041250.1.mrna1;Target=FBgn0041250.1 304 431 +
Chr2	stalkie_big_nohaplotig	exon	114519048	114519178	96	-	.	Parent=FBgn0041250.1.mrna1;Target=FBgn0041250.1 173 303 +
Chr2	stalkie_big_nohaplotig	exon	114519238	114519367	100	-	.	Parent=FBgn0041250.1.mrna1;Target=FBgn0041250.1 43 172 +
Chr2	stalkie_big_nohaplotig	exon	114519424	114519465	97	-	.	Parent=FBgn0041250.1.mrna1;Target=FBgn0041250.1 1 42 +
Chr2	stalkie_big_nohaplotig	CDS	114517813	114517884	.	-	0	Parent=FBgn0041250.1.mrna1;Target=FBgn0041250.1 760 831 +
Chr2	stalkie_big_nohaplotig	CDS	114518158	114518485	.	-	1	Parent=FBgn0041250.1.mrna1;Target=FBgn0041250.1 432 759 +
Chr2	stalkie_big_nohaplotig	CDS	114518553	114518680	.	-	0	Parent=FBgn0041250.1.mrna1;Target=FBgn0041250.1 304 431 +
Chr2	stalkie_big_nohaplotig	CDS	114519048	114519178	.	-	2	Parent=FBgn0041250.1.mrna1;Target=FBgn0041250.1 173 303 +
Chr2	stalkie_big_nohaplotig	CDS	114519238	114519367	.	-	0	Parent=FBgn0041250.1.mrna1;Target=FBgn0041250.1 43 172 +
Chr2	stalkie_big_nohaplotig	CDS	114519424	114519465	.	-	0	Parent=FBgn0041250.1.mrna1;Target=FBgn0041250.1 1 42 +
Chr2	gffcl	locus	114525897	114542927	.	+	.	ID=RLOC_00020848;geneIDs=AAEL002146.1.path1;transcripts=AAEL002146.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114525897	114542927	.	+	.	ID=AAEL002146.1.mrna1;geneID=AAEL002146.1.path1;Name=AAEL002146.1;Dir=sensecoverage=100.0;identity=99.6;matches=3421;mismatches=14;indels=0;unknowns=0;locus=RLOC_00020848
Chr2	stalkie_big_nohaplotig	exon	114525897	114526019	98	+	.	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 1 123 +
Chr2	stalkie_big_nohaplotig	exon	114526143	114526154	100	+	.	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 124 135 +
Chr2	stalkie_big_nohaplotig	exon	114527550	114527644	100	+	.	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 136 230 +
Chr2	stalkie_big_nohaplotig	exon	114527710	114527902	100	+	.	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 231 423 +
Chr2	stalkie_big_nohaplotig	exon	114528997	114529113	100	+	.	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 424 540 +
Chr2	stalkie_big_nohaplotig	exon	114529211	114529321	100	+	.	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 541 651 +
Chr2	stalkie_big_nohaplotig	exon	114530472	114530630	100	+	.	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 652 810 +
Chr2	stalkie_big_nohaplotig	exon	114530730	114530867	100	+	.	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 811 948 +
Chr2	stalkie_big_nohaplotig	exon	114530925	114531025	99	+	.	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 949 1049 +
Chr2	stalkie_big_nohaplotig	exon	114531078	114531315	100	+	.	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 1050 1287 +
Chr2	stalkie_big_nohaplotig	exon	114531371	114531664	100	+	.	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 1288 1581 +
Chr2	stalkie_big_nohaplotig	exon	114531754	114531934	100	+	.	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 1582 1762 +
Chr2	stalkie_big_nohaplotig	exon	114533006	114533208	99	+	.	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 1763 1965 +
Chr2	stalkie_big_nohaplotig	exon	114533267	114533771	99	+	.	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 1966 2470 +
Chr2	stalkie_big_nohaplotig	exon	114535891	114536225	99	+	.	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 2471 2805 +
Chr2	stalkie_big_nohaplotig	exon	114536289	114536398	99	+	.	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 2806 2915 +
Chr2	stalkie_big_nohaplotig	exon	114537078	114537388	100	+	.	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 2916 3226 +
Chr2	stalkie_big_nohaplotig	exon	114542662	114542792	100	+	.	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 3227 3357 +
Chr2	stalkie_big_nohaplotig	exon	114542850	114542927	98	+	.	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 3358 3435 +
Chr2	stalkie_big_nohaplotig	CDS	114525897	114526019	.	+	0	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 1 123 +
Chr2	stalkie_big_nohaplotig	CDS	114526143	114526154	.	+	0	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 124 135 +
Chr2	stalkie_big_nohaplotig	CDS	114527550	114527644	.	+	0	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 136 230 +
Chr2	stalkie_big_nohaplotig	CDS	114527710	114527902	.	+	1	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 231 423 +
Chr2	stalkie_big_nohaplotig	CDS	114528997	114529113	.	+	0	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 424 540 +
Chr2	stalkie_big_nohaplotig	CDS	114529211	114529321	.	+	0	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 541 651 +
Chr2	stalkie_big_nohaplotig	CDS	114530472	114530630	.	+	0	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 652 810 +
Chr2	stalkie_big_nohaplotig	CDS	114530730	114530867	.	+	0	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 811 948 +
Chr2	stalkie_big_nohaplotig	CDS	114530925	114531025	.	+	0	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 949 1049 +
Chr2	stalkie_big_nohaplotig	CDS	114531078	114531315	.	+	1	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 1050 1287 +
Chr2	stalkie_big_nohaplotig	CDS	114531371	114531664	.	+	0	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 1288 1581 +
Chr2	stalkie_big_nohaplotig	CDS	114531754	114531934	.	+	0	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 1582 1762 +
Chr2	stalkie_big_nohaplotig	CDS	114533006	114533208	.	+	2	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 1763 1965 +
Chr2	stalkie_big_nohaplotig	CDS	114533267	114533771	.	+	0	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 1966 2470 +
Chr2	stalkie_big_nohaplotig	CDS	114535891	114536225	.	+	2	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 2471 2805 +
Chr2	stalkie_big_nohaplotig	CDS	114536289	114536398	.	+	0	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 2806 2915 +
Chr2	stalkie_big_nohaplotig	CDS	114537078	114537388	.	+	1	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 2916 3226 +
Chr2	stalkie_big_nohaplotig	CDS	114542662	114542792	.	+	2	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 3227 3357 +
Chr2	stalkie_big_nohaplotig	CDS	114542850	114542927	.	+	0	Parent=AAEL002146.1.mrna1;Target=AAEL002146.1 3358 3435 +
Chr2	gffcl	locus	114527048	114527362	.	-	.	ID=RLOC_00020849;geneIDs=comp144873_c0_seq1.path1;transcripts=comp144873_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114527048	114527362	.	-	.	ID=comp144873_c0_seq1.mrna1;geneID=comp144873_c0_seq1.path1;Name=comp144873_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.4;matches=313;mismatches=2;indels=0;unknowns=0;Target=comp144873_c0_seq1 315 1 .;CDS_Target=comp144873_c0_seq1 266 186 .;locus=RLOC_00020849
Chr2	stalkie_big_nohaplotig	exon	114527048	114527362	99	-	.	Parent=comp144873_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114527097	114527177	.	-	0	Parent=comp144873_c0_seq1.mrna1
Chr2	gffcl	locus	114545917	114550432	.	+	.	ID=RLOC_00020850;geneIDs=FBgn0039429.1.path1;transcripts=FBgn0039429.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114545917	114550432	.	+	.	ID=FBgn0039429.1.mrna1;geneID=FBgn0039429.1.path1;Name=FBgn0039429.1;Dir=sensecoverage=99.8;identity=99.9;matches=1232;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020850
Chr2	stalkie_big_nohaplotig	exon	114545917	114546128	100	+	.	Parent=FBgn0039429.1.mrna1;Target=FBgn0039429.1 1 212 +
Chr2	stalkie_big_nohaplotig	exon	114548663	114548973	99	+	.	Parent=FBgn0039429.1.mrna1;Target=FBgn0039429.1 213 523 +
Chr2	stalkie_big_nohaplotig	exon	114549042	114549222	100	+	.	Parent=FBgn0039429.1.mrna1;Target=FBgn0039429.1 524 704 +
Chr2	stalkie_big_nohaplotig	exon	114549283	114549434	100	+	.	Parent=FBgn0039429.1.mrna1;Target=FBgn0039429.1 705 856 +
Chr2	stalkie_big_nohaplotig	exon	114549553	114549754	100	+	.	Parent=FBgn0039429.1.mrna1;Target=FBgn0039429.1 857 1058 +
Chr2	stalkie_big_nohaplotig	exon	114550186	114550242	100	+	.	Parent=FBgn0039429.1.mrna1;Target=FBgn0039429.1 1059 1115 +
Chr2	stalkie_big_nohaplotig	exon	114550315	114550432	100	+	.	Parent=FBgn0039429.1.mrna1;Target=FBgn0039429.1 1116 1233 +
Chr2	stalkie_big_nohaplotig	CDS	114545917	114546128	.	+	0	Parent=FBgn0039429.1.mrna1;Target=FBgn0039429.1 1 212 +
Chr2	stalkie_big_nohaplotig	CDS	114548663	114548973	.	+	1	Parent=FBgn0039429.1.mrna1;Target=FBgn0039429.1 213 523 +
Chr2	stalkie_big_nohaplotig	CDS	114549042	114549222	.	+	2	Parent=FBgn0039429.1.mrna1;Target=FBgn0039429.1 524 704 +
Chr2	stalkie_big_nohaplotig	CDS	114549283	114549434	.	+	1	Parent=FBgn0039429.1.mrna1;Target=FBgn0039429.1 705 856 +
Chr2	stalkie_big_nohaplotig	CDS	114549553	114549754	.	+	2	Parent=FBgn0039429.1.mrna1;Target=FBgn0039429.1 857 1058 +
Chr2	stalkie_big_nohaplotig	CDS	114550186	114550242	.	+	1	Parent=FBgn0039429.1.mrna1;Target=FBgn0039429.1 1059 1115 +
Chr2	stalkie_big_nohaplotig	CDS	114550315	114550432	.	+	1	Parent=FBgn0039429.1.mrna1;Target=FBgn0039429.1 1116 1233 +
Chr2	gffcl	locus	114575939	114577795	.	+	.	ID=RLOC_00020851;geneIDs=FBgn0039430.1.path1;transcripts=FBgn0039430.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114575939	114577795	.	+	.	ID=FBgn0039430.1.mrna1;geneID=FBgn0039430.1.path1;Name=FBgn0039430.1;Dir=sensecoverage=99.2;identity=99.9;matches=1688;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020851
Chr2	stalkie_big_nohaplotig	exon	114575939	114576345	100	+	.	Parent=FBgn0039430.1.mrna1;Target=FBgn0039430.1 1 407 +
Chr2	stalkie_big_nohaplotig	exon	114576399	114576607	100	+	.	Parent=FBgn0039430.1.mrna1;Target=FBgn0039430.1 408 616 +
Chr2	stalkie_big_nohaplotig	exon	114576662	114577190	99	+	.	Parent=FBgn0039430.1.mrna1;Target=FBgn0039430.1 617 1145 +
Chr2	stalkie_big_nohaplotig	exon	114577251	114577795	99	+	.	Parent=FBgn0039430.1.mrna1;Target=FBgn0039430.1 1146 1690 +
Chr2	stalkie_big_nohaplotig	CDS	114575939	114576345	.	+	0	Parent=FBgn0039430.1.mrna1;Target=FBgn0039430.1 1 407 +
Chr2	stalkie_big_nohaplotig	CDS	114576399	114576607	.	+	1	Parent=FBgn0039430.1.mrna1;Target=FBgn0039430.1 408 616 +
Chr2	stalkie_big_nohaplotig	CDS	114576662	114577190	.	+	2	Parent=FBgn0039430.1.mrna1;Target=FBgn0039430.1 617 1145 +
Chr2	stalkie_big_nohaplotig	CDS	114577251	114577794	.	+	1	Parent=FBgn0039430.1.mrna1;Target=FBgn0039430.1 1146 1689 +
Chr2	gffcl	locus	114578601	114580561	.	-	.	ID=RLOC_00020852;geneIDs=comp156651_c0_seq1.path1;transcripts=comp156651_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114578601	114580561	.	-	.	ID=comp156651_c0_seq1.mrna1;geneID=comp156651_c0_seq1.path1;Name=comp156651_c0_seq1;Dir=sensecoverage=100.0;identity=90.6;matches=1592;mismatches=70;indels=95;unknowns=0;Target=comp156651_c0_seq1 464 589 +;locus=RLOC_00020852
Chr2	stalkie_big_nohaplotig	exon	114578601	114578910	95	-	.	Parent=comp156651_c0_seq1.mrna1;Target=comp156651_c0_seq1 1397 1706 +
Chr2	stalkie_big_nohaplotig	exon	114579159	114580561	89	-	.	Parent=comp156651_c0_seq1.mrna1;Target=comp156651_c0_seq1 1 1396 +
Chr2	stalkie_big_nohaplotig	CDS	114579982	114580107	.	-	0	Parent=comp156651_c0_seq1.mrna1
Chr2	gffcl	locus	114580926	114581285	.	+	.	ID=RLOC_00020853;geneIDs=comp232231_c0_seq1.path1;transcripts=comp232231_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114580926	114581285	.	+	.	ID=comp232231_c0_seq1.mrna1;geneID=comp232231_c0_seq1.path1;Name=comp232231_c0_seq1;Dir=indeterminatecoverage=99.4;identity=100.0;matches=360;mismatches=0;indels=0;unknowns=0;Target=comp232231_c0_seq1 362 3 .;CDS_Target=comp232231_c0_seq1 360 322 .;locus=RLOC_00020853
Chr2	stalkie_big_nohaplotig	exon	114580926	114581285	100	+	.	Parent=comp232231_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114581245	114581283	.	+	0	Parent=comp232231_c0_seq1.mrna1
Chr2	gffcl	locus	114581405	114581731	.	-	.	ID=RLOC_00020854;geneIDs=comp149097_c1_seq1.path1;transcripts=comp149097_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114581405	114581731	.	-	.	ID=comp149097_c1_seq1.mrna1;geneID=comp149097_c1_seq1.path1;Name=comp149097_c1_seq1;Dir=indeterminatecoverage=58.0;identity=97.0;matches=320;mismatches=7;indels=3;unknowns=0;Target=comp149097_c1_seq1 330 1 .;CDS_Target=comp149097_c1_seq1 71 3 .;locus=RLOC_00020854
Chr2	stalkie_big_nohaplotig	exon	114581405	114581731	96	-	.	Parent=comp149097_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114581661	114581729	.	-	0	Parent=comp149097_c1_seq1.mrna1
Chr2	gffcl	locus	114582437	114582816	.	+	.	ID=RLOC_00020855;geneIDs=comp147721_c0_seq1.path1;transcripts=comp147721_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114582437	114582816	.	+	.	ID=comp147721_c0_seq1.mrna1;geneID=comp147721_c0_seq1.path1;Name=comp147721_c0_seq1;Dir=indeterminatecoverage=84.1;identity=90.4;matches=347;mismatches=3;indels=34;unknowns=0;Target=comp147721_c0_seq1 421 68 .;CDS_Target=comp147721_c0_seq1 366 241 .;locus=RLOC_00020855
Chr2	stalkie_big_nohaplotig	exon	114582437	114582816	90	+	.	Parent=comp147721_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114582636	114582761	.	+	0	Parent=comp147721_c0_seq1.mrna1
Chr2	gffcl	locus	114596514	114597263	.	+	.	ID=RLOC_00020857;geneIDs=FBgn0052269.1.path1;transcripts=FBgn0052269.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114596514	114597263	.	+	.	ID=FBgn0052269.1.mrna1;geneID=FBgn0052269.1.path1;Name=FBgn0052269.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=744;mismatches=6;indels=0;unknowns=0;Target=FBgn0052269.1 750 1 .;locus=RLOC_00020857
Chr2	stalkie_big_nohaplotig	exon	114596514	114597263	99	+	.	Parent=FBgn0052269.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114596514	114597263	.	+	0	Parent=FBgn0052269.1.mrna1
Chr2	gffcl	locus	114599074	114599837	.	+	.	ID=RLOC_00020858;geneIDs=FBgn0035070.2.path1;transcripts=FBgn0035070.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114599074	114599837	.	+	.	ID=FBgn0035070.2.mrna1;geneID=FBgn0035070.2.path1;Name=FBgn0035070.2;Dir=indeterminatecoverage=99.9;identity=98.3;matches=751;mismatches=13;indels=0;unknowns=0;Target=FBgn0035070.2 764 1 .;CDS_Target=FBgn0035070.2 762 1 .;locus=RLOC_00020858
Chr2	stalkie_big_nohaplotig	exon	114599074	114599837	98	+	.	Parent=FBgn0035070.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114599074	114599835	.	+	0	Parent=FBgn0035070.2.mrna1
Chr2	gffcl	locus	114601660	114602083	.	-	.	ID=RLOC_00020859;geneIDs=comp147758_c2_seq1.path1;transcripts=comp147758_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114601660	114602083	.	-	.	ID=comp147758_c2_seq1.mrna1;geneID=comp147758_c2_seq1.path1;Name=comp147758_c2_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=420;mismatches=4;indels=0;unknowns=0;Target=comp147758_c2_seq1 424 1 .;CDS_Target=comp147758_c2_seq1 313 230 .;locus=RLOC_00020859
Chr2	stalkie_big_nohaplotig	exon	114601660	114602083	99	-	.	Parent=comp147758_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114601771	114601854	.	-	0	Parent=comp147758_c2_seq1.mrna1
Chr2	gffcl	locus	114648332	114654141	.	-	.	ID=RLOC_00020860;geneIDs=FBgn0039581.1.path1;transcripts=FBgn0039581.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114648332	114654141	.	-	.	ID=FBgn0039581.1.mrna1;geneID=FBgn0039581.1.path1;Name=FBgn0039581.1;Dir=sensecoverage=100.0;identity=99.5;matches=2468;mismatches=7;indels=6;unknowns=0;locus=RLOC_00020860
Chr2	stalkie_big_nohaplotig	exon	114648332	114649837	99	-	.	Parent=FBgn0039581.1.mrna1;Target=FBgn0039581.1 970 2481 +
Chr2	stalkie_big_nohaplotig	exon	114649896	114650069	100	-	.	Parent=FBgn0039581.1.mrna1;Target=FBgn0039581.1 796 969 +
Chr2	stalkie_big_nohaplotig	exon	114650129	114650234	100	-	.	Parent=FBgn0039581.1.mrna1;Target=FBgn0039581.1 690 795 +
Chr2	stalkie_big_nohaplotig	exon	114650294	114650423	100	-	.	Parent=FBgn0039581.1.mrna1;Target=FBgn0039581.1 560 689 +
Chr2	stalkie_big_nohaplotig	exon	114652232	114652371	100	-	.	Parent=FBgn0039581.1.mrna1;Target=FBgn0039581.1 420 559 +
Chr2	stalkie_big_nohaplotig	exon	114652445	114652474	100	-	.	Parent=FBgn0039581.1.mrna1;Target=FBgn0039581.1 390 419 +
Chr2	stalkie_big_nohaplotig	exon	114653021	114653108	100	-	.	Parent=FBgn0039581.1.mrna1;Target=FBgn0039581.1 302 389 +
Chr2	stalkie_big_nohaplotig	exon	114653841	114654141	99	-	.	Parent=FBgn0039581.1.mrna1;Target=FBgn0039581.1 1 301 +
Chr2	stalkie_big_nohaplotig	CDS	114648332	114649837	.	-	0	Parent=FBgn0039581.1.mrna1;Target=FBgn0039581.1 970 2481 +
Chr2	stalkie_big_nohaplotig	CDS	114649896	114650069	.	-	0	Parent=FBgn0039581.1.mrna1;Target=FBgn0039581.1 796 969 +
Chr2	stalkie_big_nohaplotig	CDS	114650129	114650234	.	-	1	Parent=FBgn0039581.1.mrna1;Target=FBgn0039581.1 690 795 +
Chr2	stalkie_big_nohaplotig	CDS	114650294	114650423	.	-	2	Parent=FBgn0039581.1.mrna1;Target=FBgn0039581.1 560 689 +
Chr2	stalkie_big_nohaplotig	CDS	114652232	114652371	.	-	1	Parent=FBgn0039581.1.mrna1;Target=FBgn0039581.1 420 559 +
Chr2	stalkie_big_nohaplotig	CDS	114652445	114652474	.	-	1	Parent=FBgn0039581.1.mrna1;Target=FBgn0039581.1 390 419 +
Chr2	stalkie_big_nohaplotig	CDS	114653021	114653108	.	-	2	Parent=FBgn0039581.1.mrna1;Target=FBgn0039581.1 302 389 +
Chr2	stalkie_big_nohaplotig	CDS	114653841	114654141	.	-	0	Parent=FBgn0039581.1.mrna1;Target=FBgn0039581.1 1 301 +
Chr2	gffcl	locus	114657610	114659704	.	-	.	ID=RLOC_00020861;geneIDs=FBgn0027341.2.path1;transcripts=FBgn0027341.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114657610	114659704	.	-	.	ID=FBgn0027341.2.mrna1;geneID=FBgn0027341.2.path1;Name=FBgn0027341.2;Dir=sensecoverage=100.0;identity=99.6;matches=2029;mismatches=8;indels=0;unknowns=0;locus=RLOC_00020861
Chr2	stalkie_big_nohaplotig	exon	114657610	114659441	99	-	.	Parent=FBgn0027341.2.mrna1;Target=FBgn0027341.2 206 2037 +
Chr2	stalkie_big_nohaplotig	exon	114659500	114659704	100	-	.	Parent=FBgn0027341.2.mrna1;Target=FBgn0027341.2 1 205 +
Chr2	stalkie_big_nohaplotig	CDS	114657610	114659441	.	-	2	Parent=FBgn0027341.2.mrna1;Target=FBgn0027341.2 206 2037 +
Chr2	stalkie_big_nohaplotig	CDS	114659500	114659704	.	-	0	Parent=FBgn0027341.2.mrna1;Target=FBgn0027341.2 1 205 +
Chr2	gffcl	locus	114683649	114689123	.	+	.	ID=RLOC_00020862;geneIDs=FBgn0261618.1.path1;transcripts=FBgn0261618.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114683649	114689123	.	+	.	ID=FBgn0261618.1.mrna1;geneID=FBgn0261618.1.path1;Name=FBgn0261618.1;Dir=sensecoverage=100.0;identity=99.8;matches=3891;mismatches=5;indels=1;unknowns=0;locus=RLOC_00020862
Chr2	stalkie_big_nohaplotig	exon	114683649	114683880	100	+	.	Parent=FBgn0261618.1.mrna1;Target=FBgn0261618.1 1 232 +
Chr2	stalkie_big_nohaplotig	exon	114684263	114684327	100	+	.	Parent=FBgn0261618.1.mrna1;Target=FBgn0261618.1 233 297 +
Chr2	stalkie_big_nohaplotig	exon	114684395	114685254	100	+	.	Parent=FBgn0261618.1.mrna1;Target=FBgn0261618.1 298 1157 +
Chr2	stalkie_big_nohaplotig	exon	114686281	114688448	99	+	.	Parent=FBgn0261618.1.mrna1;Target=FBgn0261618.1 1158 3325 +
Chr2	stalkie_big_nohaplotig	exon	114688553	114689123	99	+	.	Parent=FBgn0261618.1.mrna1;Target=FBgn0261618.1 3326 3897 +
Chr2	stalkie_big_nohaplotig	CDS	114683649	114683880	.	+	0	Parent=FBgn0261618.1.mrna1;Target=FBgn0261618.1 1 232 +
Chr2	stalkie_big_nohaplotig	CDS	114684263	114684327	.	+	2	Parent=FBgn0261618.1.mrna1;Target=FBgn0261618.1 233 297 +
Chr2	stalkie_big_nohaplotig	CDS	114684395	114685254	.	+	0	Parent=FBgn0261618.1.mrna1;Target=FBgn0261618.1 298 1157 +
Chr2	stalkie_big_nohaplotig	CDS	114686281	114688448	.	+	1	Parent=FBgn0261618.1.mrna1;Target=FBgn0261618.1 1158 3325 +
Chr2	stalkie_big_nohaplotig	CDS	114688553	114689123	.	+	2	Parent=FBgn0261618.1.mrna1;Target=FBgn0261618.1 3326 3897 +
Chr2	gffcl	locus	114782553	114783075	.	-	.	ID=RLOC_00020863;geneIDs=comp144253_c0_seq1.path1;transcripts=comp144253_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114782553	114783075	.	-	.	ID=comp144253_c0_seq1.mrna1;geneID=comp144253_c0_seq1.path1;Name=comp144253_c0_seq1;Dir=indeterminatecoverage=98.9;identity=100.0;matches=523;mismatches=0;indels=0;unknowns=0;Target=comp144253_c0_seq1 529 7 .;CDS_Target=comp144253_c0_seq1 213 85 .;locus=RLOC_00020863
Chr2	stalkie_big_nohaplotig	exon	114782553	114783075	100	-	.	Parent=comp144253_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114782869	114782997	.	-	0	Parent=comp144253_c0_seq1.mrna1
Chr2	gffcl	locus	114784648	114805272	.	-	.	ID=RLOC_00020864;geneIDs=FBgn0023179.1.path2;transcripts=FBgn0023179.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	114784648	114805272	.	-	.	ID=FBgn0023179.1.mrna2;geneID=FBgn0023179.1.path2;Name=FBgn0023179.1;Dir=sensecoverage=86.6;identity=99.8;matches=1759;mismatches=3;indels=0;unknowns=0;locus=RLOC_00020864
Chr2	stalkie_big_nohaplotig	exon	114784648	114784806	100	-	.	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 1888 2046 +
Chr2	stalkie_big_nohaplotig	exon	114784876	114784993	99	-	.	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 1770 1887 +
Chr2	stalkie_big_nohaplotig	exon	114785057	114785221	99	-	.	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 1605 1769 +
Chr2	stalkie_big_nohaplotig	exon	114785287	114785520	100	-	.	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 1371 1604 +
Chr2	stalkie_big_nohaplotig	exon	114785961	114786234	99	-	.	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 1097 1370 +
Chr2	stalkie_big_nohaplotig	exon	114786311	114786350	100	-	.	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 1057 1096 +
Chr2	stalkie_big_nohaplotig	exon	114786435	114786610	100	-	.	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 881 1056 +
Chr2	stalkie_big_nohaplotig	exon	114787117	114787205	100	-	.	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 792 880 +
Chr2	stalkie_big_nohaplotig	exon	114787365	114787441	100	-	.	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 715 791 +
Chr2	stalkie_big_nohaplotig	exon	114791863	114791900	100	-	.	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 677 714 +
Chr2	stalkie_big_nohaplotig	exon	114791959	114792232	100	-	.	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 403 676 +
Chr2	stalkie_big_nohaplotig	exon	114797663	114797771	100	-	.	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 294 402 +
Chr2	stalkie_big_nohaplotig	exon	114805264	114805272	100	-	.	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 275 283 +
Chr2	stalkie_big_nohaplotig	CDS	114784648	114784806	.	-	0	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 1888 2046 +
Chr2	stalkie_big_nohaplotig	CDS	114784876	114784993	.	-	1	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 1770 1887 +
Chr2	stalkie_big_nohaplotig	CDS	114785057	114785221	.	-	1	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 1605 1769 +
Chr2	stalkie_big_nohaplotig	CDS	114785287	114785520	.	-	1	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 1371 1604 +
Chr2	stalkie_big_nohaplotig	CDS	114785961	114786234	.	-	2	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 1097 1370 +
Chr2	stalkie_big_nohaplotig	CDS	114786311	114786350	.	-	0	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 1057 1096 +
Chr2	stalkie_big_nohaplotig	CDS	114786435	114786610	.	-	2	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 881 1056 +
Chr2	stalkie_big_nohaplotig	CDS	114787117	114787205	.	-	1	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 792 880 +
Chr2	stalkie_big_nohaplotig	CDS	114787365	114787441	.	-	0	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 715 791 +
Chr2	stalkie_big_nohaplotig	CDS	114791863	114791900	.	-	2	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 677 714 +
Chr2	stalkie_big_nohaplotig	CDS	114791959	114791968	.	-	0	Parent=FBgn0023179.1.mrna2;Target=FBgn0023179.1 667 676 +
Chr2	gffcl	locus	114865761	115715229	.	-	.	ID=RLOC_00020865;geneIDs=comp153891_c0_seq1.path1;transcripts=comp153891_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114865761	115715229	.	-	.	ID=comp153891_c0_seq1.mrna1;geneID=comp153891_c0_seq1.path1;Name=comp153891_c0_seq1;Dir=indeterminatecoverage=63.5;identity=99.2;matches=831;mismatches=4;indels=3;unknowns=0;Target=comp153891_c0_seq1 463 296 .;locus=RLOC_00020865
Chr2	stalkie_big_nohaplotig	exon	114865761	114865786	73	-	.	Parent=comp153891_c0_seq1.mrna1;Target=comp153891_c0_seq1 846 824 .
Chr2	stalkie_big_nohaplotig	exon	114871576	114871584	100	-	.	Parent=comp153891_c0_seq1.mrna1;Target=comp153891_c0_seq1 811 803 .
Chr2	stalkie_big_nohaplotig	exon	114894915	114894919	100	-	.	Parent=comp153891_c0_seq1.mrna1;Target=comp153891_c0_seq1 802 798 .
Chr2	stalkie_big_nohaplotig	exon	114900789	114900803	100	-	.	Parent=comp153891_c0_seq1.mrna1;Target=comp153891_c0_seq1 797 783 .
Chr2	stalkie_big_nohaplotig	exon	115714448	115715229	100	-	.	Parent=comp153891_c0_seq1.mrna1;Target=comp153891_c0_seq1 782 1 .
Chr2	stalkie_big_nohaplotig	CDS	115714767	115714934	.	-	0	Parent=comp153891_c0_seq1.mrna1
Chr2	gffcl	locus	114973722	114998665	.	-	.	ID=RLOC_00020866;geneIDs=comp116145_c0_seq1.path1;transcripts=comp116145_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114973722	114998665	.	-	.	ID=comp116145_c0_seq1.mrna1;geneID=comp116145_c0_seq1.path1;Name=comp116145_c0_seq1;Dir=indeterminatecoverage=93.9;identity=100.0;matches=309;mismatches=0;indels=0;unknowns=0;Target=comp116145_c0_seq1 328 251 .;locus=RLOC_00020866
Chr2	stalkie_big_nohaplotig	exon	114973722	114974015	100	-	.	Parent=comp116145_c0_seq1.mrna1;Target=comp116145_c0_seq1 329 36 .
Chr2	stalkie_big_nohaplotig	exon	114986812	114986815	100	-	.	Parent=comp116145_c0_seq1.mrna1;Target=comp116145_c0_seq1 35 32 .
Chr2	stalkie_big_nohaplotig	exon	114990727	114990729	100	-	.	Parent=comp116145_c0_seq1.mrna1;Target=comp116145_c0_seq1 31 29 .
Chr2	stalkie_big_nohaplotig	exon	114998658	114998665	100	-	.	Parent=comp116145_c0_seq1.mrna1;Target=comp116145_c0_seq1 28 21 .
Chr2	stalkie_big_nohaplotig	CDS	114973723	114973800	.	-	0	Parent=comp116145_c0_seq1.mrna1
Chr2	gffcl	locus	114977377	114977834	.	+	.	ID=RLOC_00020867;geneIDs=comp145486_c0_seq1.path1;transcripts=comp145486_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114977377	114977834	.	+	.	ID=comp145486_c0_seq1.mrna1;geneID=comp145486_c0_seq1.path1;Name=comp145486_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=456;mismatches=2;indels=0;unknowns=0;Target=comp145486_c0_seq1 458 1 .;CDS_Target=comp145486_c0_seq1 50 3 .;locus=RLOC_00020867
Chr2	stalkie_big_nohaplotig	exon	114977377	114977834	99	+	.	Parent=comp145486_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114977379	114977426	.	+	0	Parent=comp145486_c0_seq1.mrna1
Chr2	gffcl	locus	114979071	114979422	.	-	.	ID=RLOC_00020868;geneIDs=comp149270_c0_seq1.path1;transcripts=comp149270_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114979071	114979422	.	-	.	ID=comp149270_c0_seq1.mrna1;geneID=comp149270_c0_seq1.path1;Name=comp149270_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=352;mismatches=0;indels=0;unknowns=0;Target=comp149270_c0_seq1 352 1 .;CDS_Target=comp149270_c0_seq1 94 32 .;locus=RLOC_00020868
Chr2	stalkie_big_nohaplotig	exon	114979071	114979422	100	-	.	Parent=comp149270_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	114979329	114979391	.	-	0	Parent=comp149270_c0_seq1.mrna1
Chr2	gffcl	locus	114980444	114986794	.	-	.	ID=RLOC_00020869;geneIDs=FBgn0085383.1.path1;transcripts=FBgn0085383.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	114980444	114986794	.	-	.	ID=FBgn0085383.1.mrna1;geneID=FBgn0085383.1.path1;Name=FBgn0085383.1;Dir=sensecoverage=79.7;identity=99.5;matches=845;mismatches=4;indels=0;unknowns=0;locus=RLOC_00020869
Chr2	stalkie_big_nohaplotig	exon	114980444	114980485	100	-	.	Parent=FBgn0085383.1.mrna1;Target=FBgn0085383.1 1024 1065 +
Chr2	stalkie_big_nohaplotig	exon	114980590	114980749	100	-	.	Parent=FBgn0085383.1.mrna1;Target=FBgn0085383.1 864 1023 +
Chr2	stalkie_big_nohaplotig	exon	114980845	114981195	100	-	.	Parent=FBgn0085383.1.mrna1;Target=FBgn0085383.1 513 863 +
Chr2	stalkie_big_nohaplotig	exon	114986384	114986576	97	-	.	Parent=FBgn0085383.1.mrna1;Target=FBgn0085383.1 320 512 +
Chr2	stalkie_big_nohaplotig	exon	114986692	114986794	100	-	.	Parent=FBgn0085383.1.mrna1;Target=FBgn0085383.1 217 319 +
Chr2	stalkie_big_nohaplotig	CDS	114980444	114980485	.	-	0	Parent=FBgn0085383.1.mrna1;Target=FBgn0085383.1 1024 1065 +
Chr2	stalkie_big_nohaplotig	CDS	114980590	114980749	.	-	1	Parent=FBgn0085383.1.mrna1;Target=FBgn0085383.1 864 1023 +
Chr2	stalkie_big_nohaplotig	CDS	114980845	114981195	.	-	1	Parent=FBgn0085383.1.mrna1;Target=FBgn0085383.1 513 863 +
Chr2	stalkie_big_nohaplotig	CDS	114986384	114986576	.	-	2	Parent=FBgn0085383.1.mrna1;Target=FBgn0085383.1 320 512 +
Chr2	stalkie_big_nohaplotig	CDS	114986692	114986794	.	-	0	Parent=FBgn0085383.1.mrna1;Target=FBgn0085383.1 217 319 +
Chr2	gffcl	locus	115178998	115179223	.	-	.	ID=RLOC_00020870;geneIDs=FBgn0085391.1.path1;transcripts=FBgn0085391.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	115178998	115179223	.	-	.	ID=FBgn0085391.1.mrna1;geneID=FBgn0085391.1.path1;Name=FBgn0085391.1;Dir=indeterminatecoverage=18.3;identity=100.0;matches=226;mismatches=0;indels=0;unknowns=0;Target=FBgn0085391.1 226 1 .;locus=RLOC_00020870
Chr2	stalkie_big_nohaplotig	exon	115178998	115179223	100	-	.	Parent=FBgn0085391.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	115178998	115179223	.	-	0	Parent=FBgn0085391.1.mrna1
Chr2	gffcl	locus	115179987	115183374	.	-	.	ID=RLOC_00020871;geneIDs=comp151657_c0_seq1.path1;transcripts=comp151657_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	115179987	115183374	.	-	.	ID=comp151657_c0_seq1.mrna1;geneID=comp151657_c0_seq1.path1;Name=comp151657_c0_seq1;Dir=antisensecoverage=97.6;identity=99.4;matches=846;mismatches=4;indels=1;unknowns=0;Target=comp151657_c0_seq1 424 531 .;locus=RLOC_00020871
Chr2	stalkie_big_nohaplotig	exon	115179987	115180000	100	-	.	Parent=comp151657_c0_seq1.mrna1;Target=comp151657_c0_seq1 1 14 -
Chr2	stalkie_big_nohaplotig	exon	115182539	115183374	99	-	.	Parent=comp151657_c0_seq1.mrna1;Target=comp151657_c0_seq1 15 851 -
Chr2	stalkie_big_nohaplotig	CDS	115182948	115183054	.	-	0	Parent=comp151657_c0_seq1.mrna1
Chr2	gffcl	locus	115386955	115410712	.	+	.	ID=RLOC_00020872;geneIDs=FBgn0003890.1.path1;transcripts=FBgn0003890.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	115386955	115410712	.	+	.	ID=FBgn0003890.1.mrna1;geneID=FBgn0003890.1.path1;Name=FBgn0003890.1;Dir=sensecoverage=94.2;identity=99.9;matches=1307;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020872
Chr2	stalkie_big_nohaplotig	exon	115386955	115387189	100	+	.	Parent=FBgn0003890.1.mrna1;Target=FBgn0003890.1 82 316 +
Chr2	stalkie_big_nohaplotig	exon	115389093	115389322	100	+	.	Parent=FBgn0003890.1.mrna1;Target=FBgn0003890.1 317 546 +
Chr2	stalkie_big_nohaplotig	exon	115401723	115401890	100	+	.	Parent=FBgn0003890.1.mrna1;Target=FBgn0003890.1 547 714 +
Chr2	stalkie_big_nohaplotig	exon	115405228	115405492	100	+	.	Parent=FBgn0003890.1.mrna1;Target=FBgn0003890.1 715 979 +
Chr2	stalkie_big_nohaplotig	exon	115410217	115410539	99	+	.	Parent=FBgn0003890.1.mrna1;Target=FBgn0003890.1 980 1302 +
Chr2	stalkie_big_nohaplotig	exon	115410626	115410712	100	+	.	Parent=FBgn0003890.1.mrna1;Target=FBgn0003890.1 1303 1389 +
Chr2	stalkie_big_nohaplotig	CDS	115386955	115387189	.	+	0	Parent=FBgn0003890.1.mrna1;Target=FBgn0003890.1 82 316 +
Chr2	stalkie_big_nohaplotig	CDS	115389093	115389322	.	+	2	Parent=FBgn0003890.1.mrna1;Target=FBgn0003890.1 317 546 +
Chr2	stalkie_big_nohaplotig	CDS	115401723	115401890	.	+	0	Parent=FBgn0003890.1.mrna1;Target=FBgn0003890.1 547 714 +
Chr2	stalkie_big_nohaplotig	CDS	115405228	115405492	.	+	0	Parent=FBgn0003890.1.mrna1;Target=FBgn0003890.1 715 979 +
Chr2	stalkie_big_nohaplotig	CDS	115410217	115410539	.	+	2	Parent=FBgn0003890.1.mrna1;Target=FBgn0003890.1 980 1302 +
Chr2	stalkie_big_nohaplotig	CDS	115410626	115410712	.	+	0	Parent=FBgn0003890.1.mrna1;Target=FBgn0003890.1 1303 1389 +
Chr2	gffcl	locus	115413380	115416772	.	-	.	ID=RLOC_00020873;geneIDs=FBgn0039566.1.path1;transcripts=FBgn0039566.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	115413380	115416772	.	-	.	ID=FBgn0039566.1.mrna1;geneID=FBgn0039566.1.path1;Name=FBgn0039566.1;Dir=sensecoverage=100.0;identity=99.9;matches=2932;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020873
Chr2	stalkie_big_nohaplotig	exon	115413380	115413734	99	-	.	Parent=FBgn0039566.1.mrna1;Target=FBgn0039566.1 2580 2934 +
Chr2	stalkie_big_nohaplotig	exon	115413800	115414887	100	-	.	Parent=FBgn0039566.1.mrna1;Target=FBgn0039566.1 1492 2579 +
Chr2	stalkie_big_nohaplotig	exon	115414942	115415356	100	-	.	Parent=FBgn0039566.1.mrna1;Target=FBgn0039566.1 1077 1491 +
Chr2	stalkie_big_nohaplotig	exon	115415418	115415609	100	-	.	Parent=FBgn0039566.1.mrna1;Target=FBgn0039566.1 885 1076 +
Chr2	stalkie_big_nohaplotig	exon	115415709	115415800	100	-	.	Parent=FBgn0039566.1.mrna1;Target=FBgn0039566.1 793 884 +
Chr2	stalkie_big_nohaplotig	exon	115415860	115416017	100	-	.	Parent=FBgn0039566.1.mrna1;Target=FBgn0039566.1 635 792 +
Chr2	stalkie_big_nohaplotig	exon	115416075	115416585	100	-	.	Parent=FBgn0039566.1.mrna1;Target=FBgn0039566.1 124 634 +
Chr2	stalkie_big_nohaplotig	exon	115416650	115416772	100	-	.	Parent=FBgn0039566.1.mrna1;Target=FBgn0039566.1 1 123 +
Chr2	stalkie_big_nohaplotig	CDS	115413380	115413734	.	-	1	Parent=FBgn0039566.1.mrna1;Target=FBgn0039566.1 2580 2934 +
Chr2	stalkie_big_nohaplotig	CDS	115413800	115414887	.	-	0	Parent=FBgn0039566.1.mrna1;Target=FBgn0039566.1 1492 2579 +
Chr2	stalkie_big_nohaplotig	CDS	115414942	115415356	.	-	1	Parent=FBgn0039566.1.mrna1;Target=FBgn0039566.1 1077 1491 +
Chr2	stalkie_big_nohaplotig	CDS	115415418	115415609	.	-	1	Parent=FBgn0039566.1.mrna1;Target=FBgn0039566.1 885 1076 +
Chr2	stalkie_big_nohaplotig	CDS	115415709	115415800	.	-	0	Parent=FBgn0039566.1.mrna1;Target=FBgn0039566.1 793 884 +
Chr2	stalkie_big_nohaplotig	CDS	115415860	115416017	.	-	2	Parent=FBgn0039566.1.mrna1;Target=FBgn0039566.1 635 792 +
Chr2	stalkie_big_nohaplotig	CDS	115416075	115416585	.	-	0	Parent=FBgn0039566.1.mrna1;Target=FBgn0039566.1 124 634 +
Chr2	stalkie_big_nohaplotig	CDS	115416650	115416772	.	-	0	Parent=FBgn0039566.1.mrna1;Target=FBgn0039566.1 1 123 +
Chr2	gffcl	locus	115426938	115429466	.	+	.	ID=RLOC_00020874;geneIDs=FBgn0038114.1.path1,comp157430_c0_seq1.path1;transcripts=comp157430_c0_seq1.mrna1,FBgn0038114.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	115426938	115429466	.	+	.	ID=comp157430_c0_seq1.mrna1;geneID=comp157430_c0_seq1.path1;Name=comp157430_c0_seq1;Dir=antisensecoverage=100.0;identity=99.3;matches=1045;mismatches=7;indels=0;unknowns=0;locus=RLOC_00020874
Chr2	stalkie_big_nohaplotig	exon	115426938	115427427	99	+	.	Parent=comp157430_c0_seq1.mrna1;Target=comp157430_c0_seq1 563 1052 -
Chr2	stalkie_big_nohaplotig	exon	115428694	115428803	99	+	.	Parent=comp157430_c0_seq1.mrna1;Target=comp157430_c0_seq1 453 562 -
Chr2	stalkie_big_nohaplotig	exon	115428871	115429035	98	+	.	Parent=comp157430_c0_seq1.mrna1;Target=comp157430_c0_seq1 288 452 -
Chr2	stalkie_big_nohaplotig	exon	115429116	115429381	100	+	.	Parent=comp157430_c0_seq1.mrna1;Target=comp157430_c0_seq1 22 287 -
Chr2	stalkie_big_nohaplotig	exon	115429446	115429466	100	+	.	Parent=comp157430_c0_seq1.mrna1;Target=comp157430_c0_seq1 1 21 -
Chr2	stalkie_big_nohaplotig	CDS	115427029	115427427	.	+	0	Parent=comp157430_c0_seq1.mrna1;Target=comp157430_c0_seq1 563 961 .
Chr2	stalkie_big_nohaplotig	CDS	115428694	115428803	.	+	0	Parent=comp157430_c0_seq1.mrna1;Target=comp157430_c0_seq1 453 562 .
Chr2	stalkie_big_nohaplotig	CDS	115428871	115429035	.	+	1	Parent=comp157430_c0_seq1.mrna1;Target=comp157430_c0_seq1 288 452 .
Chr2	stalkie_big_nohaplotig	CDS	115429116	115429128	.	+	1	Parent=comp157430_c0_seq1.mrna1;Target=comp157430_c0_seq1 275 287 .
Chr2	stalkie_big_nohaplotig	mRNA	115427008	115429466	.	+	.	ID=FBgn0038114.1.mrna1;geneID=FBgn0038114.1.path1;Name=FBgn0038114.1;Dir=sensecoverage=100.0;identity=99.4;matches=963;mismatches=6;indels=0;unknowns=0;locus=RLOC_00020874
Chr2	stalkie_big_nohaplotig	exon	115427008	115427427	99	+	.	Parent=FBgn0038114.1.mrna1;Target=FBgn0038114.1 1 420 +
Chr2	stalkie_big_nohaplotig	exon	115428694	115428803	99	+	.	Parent=FBgn0038114.1.mrna1;Target=FBgn0038114.1 421 530 +
Chr2	stalkie_big_nohaplotig	exon	115428871	115429035	98	+	.	Parent=FBgn0038114.1.mrna1;Target=FBgn0038114.1 531 695 +
Chr2	stalkie_big_nohaplotig	exon	115429129	115429381	100	+	.	Parent=FBgn0038114.1.mrna1;Target=FBgn0038114.1 696 948 +
Chr2	stalkie_big_nohaplotig	exon	115429446	115429466	100	+	.	Parent=FBgn0038114.1.mrna1;Target=FBgn0038114.1 949 969 +
Chr2	stalkie_big_nohaplotig	CDS	115427008	115427427	.	+	0	Parent=FBgn0038114.1.mrna1;Target=FBgn0038114.1 1 420 +
Chr2	stalkie_big_nohaplotig	CDS	115428694	115428803	.	+	0	Parent=FBgn0038114.1.mrna1;Target=FBgn0038114.1 421 530 +
Chr2	stalkie_big_nohaplotig	CDS	115428871	115429035	.	+	1	Parent=FBgn0038114.1.mrna1;Target=FBgn0038114.1 531 695 +
Chr2	stalkie_big_nohaplotig	CDS	115429129	115429381	.	+	1	Parent=FBgn0038114.1.mrna1;Target=FBgn0038114.1 696 948 +
Chr2	stalkie_big_nohaplotig	CDS	115429446	115429466	.	+	0	Parent=FBgn0038114.1.mrna1;Target=FBgn0038114.1 949 969 +
Chr2	gffcl	locus	115437907	115450817	.	-	.	ID=RLOC_00020875;geneIDs=FBgn0039564.1.path1;transcripts=FBgn0039564.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	115437907	115450817	.	-	.	ID=FBgn0039564.1.mrna1;geneID=FBgn0039564.1.path1;Name=FBgn0039564.1;Dir=sensecoverage=100.0;identity=92.4;matches=2055;mismatches=135;indels=33;unknowns=0;locus=RLOC_00020875
Chr2	stalkie_big_nohaplotig	exon	115437907	115438905	91	-	.	Parent=FBgn0039564.1.mrna1;Target=FBgn0039564.1 1222 2220 +
Chr2	stalkie_big_nohaplotig	exon	115438982	115439009	96	-	.	Parent=FBgn0039564.1.mrna1;Target=FBgn0039564.1 1194 1221 +
Chr2	stalkie_big_nohaplotig	exon	115449652	115450817	92	-	.	Parent=FBgn0039564.1.mrna1;Target=FBgn0039564.1 1 1193 +
Chr2	stalkie_big_nohaplotig	CDS	115437907	115438905	.	-	0	Parent=FBgn0039564.1.mrna1;Target=FBgn0039564.1 1222 2220 +
Chr2	stalkie_big_nohaplotig	CDS	115438982	115439009	.	-	1	Parent=FBgn0039564.1.mrna1;Target=FBgn0039564.1 1194 1221 +
Chr2	stalkie_big_nohaplotig	CDS	115449652	115450817	.	-	0	Parent=FBgn0039564.1.mrna1;Target=FBgn0039564.1 1 1193 +
Chr2	gffcl	locus	115464519	115465629	.	+	.	ID=RLOC_00020876;geneIDs=FBgn0259990.1.path1;transcripts=FBgn0259990.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	115464519	115465629	.	+	.	ID=FBgn0259990.1.mrna1;geneID=FBgn0259990.1.path1;Name=FBgn0259990.1;Dir=sensecoverage=100.0;identity=99.8;matches=1051;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020876
Chr2	stalkie_big_nohaplotig	exon	115464519	115464688	99	+	.	Parent=FBgn0259990.1.mrna1;Target=FBgn0259990.1 1 170 +
Chr2	stalkie_big_nohaplotig	exon	115464747	115465629	99	+	.	Parent=FBgn0259990.1.mrna1;Target=FBgn0259990.1 171 1053 +
Chr2	stalkie_big_nohaplotig	CDS	115464519	115464688	.	+	0	Parent=FBgn0259990.1.mrna1;Target=FBgn0259990.1 1 170 +
Chr2	stalkie_big_nohaplotig	CDS	115464747	115465629	.	+	1	Parent=FBgn0259990.1.mrna1;Target=FBgn0259990.1 171 1053 +
Chr2	gffcl	locus	115466244	115466806	.	+	.	ID=RLOC_00020877;geneIDs=FBgn0039565.1.path1;transcripts=FBgn0039565.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	115466244	115466806	.	+	.	ID=FBgn0039565.1.mrna1;geneID=FBgn0039565.1.path1;Name=FBgn0039565.1;Dir=sensecoverage=100.0;identity=99.5;matches=439;mismatches=1;indels=1;unknowns=0;Target=FBgn0039565.1 3 44 +;locus=RLOC_00020877
Chr2	stalkie_big_nohaplotig	exon	115466244	115466409	99	+	.	Parent=FBgn0039565.1.mrna1;Target=FBgn0039565.1 1 167 +
Chr2	stalkie_big_nohaplotig	exon	115466476	115466548	100	+	.	Parent=FBgn0039565.1.mrna1;Target=FBgn0039565.1 168 240 +
Chr2	stalkie_big_nohaplotig	exon	115466606	115466806	99	+	.	Parent=FBgn0039565.1.mrna1;Target=FBgn0039565.1 241 441 +
Chr2	stalkie_big_nohaplotig	CDS	115466246	115466286	.	+	0	Parent=FBgn0039565.1.mrna1
Chr2	gffcl	locus	115470137	115470343	.	+	.	ID=RLOC_00020878;geneIDs=comp149267_c0_seq1.path1;transcripts=comp149267_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	115470137	115470343	.	+	.	ID=comp149267_c0_seq1.mrna1;geneID=comp149267_c0_seq1.path1;Name=comp149267_c0_seq1;Dir=indeterminatecoverage=85.5;identity=96.1;matches=199;mismatches=8;indels=0;unknowns=0;Target=comp149267_c0_seq1 242 36 .;CDS_Target=comp149267_c0_seq1 159 37 .;locus=RLOC_00020878
Chr2	stalkie_big_nohaplotig	exon	115470137	115470343	96	+	.	Parent=comp149267_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	115470138	115470260	.	+	0	Parent=comp149267_c0_seq1.mrna1
Chr2	gffcl	locus	115472774	115472927	.	+	.	ID=RLOC_00020879;geneIDs=comp149267_c0_seq1.path2;transcripts=comp149267_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	115472774	115472927	.	+	.	ID=comp149267_c0_seq1.mrna2;geneID=comp149267_c0_seq1.path2;Name=comp149267_c0_seq1;Dir=indeterminatecoverage=63.6;identity=98.7;matches=152;mismatches=2;indels=0;unknowns=0;Target=comp149267_c0_seq1 242 89 .;CDS_Target=comp149267_c0_seq1 175 89 .;locus=RLOC_00020879
Chr2	stalkie_big_nohaplotig	exon	115472774	115472927	98	+	.	Parent=comp149267_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	115472774	115472860	.	+	0	Parent=comp149267_c0_seq1.mrna2
Chr2	gffcl	locus	115475612	115478639	.	-	.	ID=RLOC_00020880;geneIDs=FBgn0039562.1.path1;transcripts=FBgn0039562.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	115475612	115478639	.	-	.	ID=FBgn0039562.1.mrna1;geneID=FBgn0039562.1.path1;Name=FBgn0039562.1;Dir=sensecoverage=100.0;identity=100.0;matches=2400;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020880
Chr2	stalkie_big_nohaplotig	exon	115475612	115476509	100	-	.	Parent=FBgn0039562.1.mrna1;Target=FBgn0039562.1 1503 2400 +
Chr2	stalkie_big_nohaplotig	exon	115476566	115477839	100	-	.	Parent=FBgn0039562.1.mrna1;Target=FBgn0039562.1 229 1502 +
Chr2	stalkie_big_nohaplotig	exon	115478284	115478366	100	-	.	Parent=FBgn0039562.1.mrna1;Target=FBgn0039562.1 146 228 +
Chr2	stalkie_big_nohaplotig	exon	115478440	115478535	100	-	.	Parent=FBgn0039562.1.mrna1;Target=FBgn0039562.1 50 145 +
Chr2	stalkie_big_nohaplotig	exon	115478591	115478639	100	-	.	Parent=FBgn0039562.1.mrna1;Target=FBgn0039562.1 1 49 +
Chr2	stalkie_big_nohaplotig	CDS	115475612	115476509	.	-	1	Parent=FBgn0039562.1.mrna1;Target=FBgn0039562.1 1503 2400 +
Chr2	stalkie_big_nohaplotig	CDS	115476566	115477839	.	-	0	Parent=FBgn0039562.1.mrna1;Target=FBgn0039562.1 229 1502 +
Chr2	stalkie_big_nohaplotig	CDS	115478284	115478366	.	-	2	Parent=FBgn0039562.1.mrna1;Target=FBgn0039562.1 146 228 +
Chr2	stalkie_big_nohaplotig	CDS	115478440	115478535	.	-	2	Parent=FBgn0039562.1.mrna1;Target=FBgn0039562.1 50 145 +
Chr2	stalkie_big_nohaplotig	CDS	115478591	115478639	.	-	0	Parent=FBgn0039562.1.mrna1;Target=FBgn0039562.1 1 49 +
Chr2	gffcl	locus	115501670	115501938	.	+	.	ID=RLOC_00020882;geneIDs=FBgn0023179.1.path1;transcripts=FBgn0023179.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	115501670	115501938	.	+	.	ID=FBgn0023179.1.mrna1;geneID=FBgn0023179.1.path1;Name=FBgn0023179.1;Dir=indeterminatecoverage=13.1;identity=98.9;matches=266;mismatches=3;indels=0;unknowns=0;Target=FBgn0023179.1 274 6 .;locus=RLOC_00020882
Chr2	stalkie_big_nohaplotig	exon	115501670	115501938	98	+	.	Parent=FBgn0023179.1.mrna1
Chr2	gffcl	locus	115614368	115615147	.	-	.	ID=RLOC_00020884;geneIDs=FBgn0035070.1.path1;transcripts=FBgn0035070.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	115614368	115615147	.	-	.	ID=FBgn0035070.1.mrna1;geneID=FBgn0035070.1.path1;Name=FBgn0035070.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=778;mismatches=2;indels=0;unknowns=0;Target=FBgn0035070.1 780 1 .;locus=RLOC_00020884
Chr2	stalkie_big_nohaplotig	exon	115614368	115615147	99	-	.	Parent=FBgn0035070.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	115614368	115615147	.	-	0	Parent=FBgn0035070.1.mrna1
Chr2	gffcl	locus	115625744	115626298	.	-	.	ID=RLOC_00020885;geneIDs=comp152736_c0_seq1.path1;transcripts=comp152736_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	115625744	115626298	.	-	.	ID=comp152736_c0_seq1.mrna1;geneID=comp152736_c0_seq1.path1;Name=comp152736_c0_seq1;Dir=indeterminatecoverage=93.1;identity=98.9;matches=550;mismatches=5;indels=1;unknowns=0;Target=comp152736_c0_seq1 597 42 .;CDS_Target=comp152736_c0_seq1 248 123 .;locus=RLOC_00020885
Chr2	stalkie_big_nohaplotig	exon	115625744	115626298	98	-	.	Parent=comp152736_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	115626092	115626217	.	-	0	Parent=comp152736_c0_seq1.mrna1
Chr2	gffcl	locus	115627535	115627760	.	+	.	ID=RLOC_00020886;geneIDs=comp145595_c0_seq1.path1;transcripts=comp145595_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	115627535	115627760	.	+	.	ID=comp145595_c0_seq1.mrna1;geneID=comp145595_c0_seq1.path1;Name=comp145595_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=220;mismatches=6;indels=0;unknowns=0;Target=comp145595_c0_seq1 226 1 .;CDS_Target=comp145595_c0_seq1 153 88 .;locus=RLOC_00020886
Chr2	stalkie_big_nohaplotig	exon	115627535	115627760	97	+	.	Parent=comp145595_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	115627622	115627687	.	+	0	Parent=comp145595_c0_seq1.mrna1
Chr2	gffcl	locus	115713110	115891324	.	-	.	ID=RLOC_00020887;geneIDs=comp161782_c2_seq1.path1;transcripts=comp161782_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	115713110	115891324	.	-	.	ID=comp161782_c2_seq1.mrna1;geneID=comp161782_c2_seq1.path1;Name=comp161782_c2_seq1;Dir=antisensecoverage=49.4;identity=99.0;matches=2518;mismatches=12;indels=14;unknowns=0;locus=RLOC_00020887
Chr2	stalkie_big_nohaplotig	exon	115713110	115713121	41	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2201 2205 -
Chr2	stalkie_big_nohaplotig	exon	115715692	115715699	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2206 2213 -
Chr2	stalkie_big_nohaplotig	exon	115717492	115717500	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2214 2222 -
Chr2	stalkie_big_nohaplotig	exon	115718822	115718826	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2223 2227 -
Chr2	stalkie_big_nohaplotig	exon	115726635	115726640	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2228 2233 -
Chr2	stalkie_big_nohaplotig	exon	115726668	115726672	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2290 2294 -
Chr2	stalkie_big_nohaplotig	exon	115731643	115731647	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2295 2299 -
Chr2	stalkie_big_nohaplotig	exon	115737968	115737971	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2300 2303 -
Chr2	stalkie_big_nohaplotig	exon	115742174	115742177	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2304 2307 -
Chr2	stalkie_big_nohaplotig	exon	115742776	115742779	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2308 2311 -
Chr2	stalkie_big_nohaplotig	exon	115766341	115766349	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2312 2320 -
Chr2	stalkie_big_nohaplotig	exon	115790679	115790696	84	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2321 2339 -
Chr2	stalkie_big_nohaplotig	exon	115818217	115818218	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2352 2353 -
Chr2	stalkie_big_nohaplotig	exon	115825005	115825013	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2354 2362 -
Chr2	stalkie_big_nohaplotig	exon	115832965	115833016	74	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2363 2420 -
Chr2	stalkie_big_nohaplotig	exon	115857769	115857906	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2421 2558 -
Chr2	stalkie_big_nohaplotig	exon	115859082	115859437	99	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2559 2914 -
Chr2	stalkie_big_nohaplotig	exon	115875783	115876039	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2915 3171 -
Chr2	stalkie_big_nohaplotig	exon	115877090	115877169	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 3172 3251 -
Chr2	stalkie_big_nohaplotig	exon	115878841	115879092	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 3252 3503 -
Chr2	stalkie_big_nohaplotig	exon	115879170	115879393	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 3504 3727 -
Chr2	stalkie_big_nohaplotig	exon	115884194	115884268	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 3728 3802 -
Chr2	stalkie_big_nohaplotig	exon	115889488	115889539	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 3803 3854 -
Chr2	stalkie_big_nohaplotig	exon	115889651	115890017	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 3855 4221 -
Chr2	stalkie_big_nohaplotig	exon	115890084	115890251	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 4222 4389 -
Chr2	stalkie_big_nohaplotig	exon	115890344	115890589	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 4390 4635 -
Chr2	stalkie_big_nohaplotig	exon	115891156	115891324	100	-	.	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 4636 4804 -
Chr2	stalkie_big_nohaplotig	CDS	115713111	115713121	.	-	1	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2202 2205 .
Chr2	stalkie_big_nohaplotig	CDS	115715692	115715699	.	-	0	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2206 2213 .
Chr2	stalkie_big_nohaplotig	CDS	115717492	115717500	.	-	0	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2214 2222 .
Chr2	stalkie_big_nohaplotig	CDS	115718822	115718826	.	-	2	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2223 2227 .
Chr2	stalkie_big_nohaplotig	CDS	115726635	115726640	.	-	2	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2228 2233 .
Chr2	stalkie_big_nohaplotig	CDS	115726668	115726672	.	-	1	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2290 2294 .
Chr2	stalkie_big_nohaplotig	CDS	115731643	115731647	.	-	0	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2295 2299 .
Chr2	stalkie_big_nohaplotig	CDS	115737968	115737971	.	-	1	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2300 2303 .
Chr2	stalkie_big_nohaplotig	CDS	115742174	115742177	.	-	2	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2304 2307 .
Chr2	stalkie_big_nohaplotig	CDS	115742776	115742779	.	-	0	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2308 2311 .
Chr2	stalkie_big_nohaplotig	CDS	115766341	115766349	.	-	0	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2312 2320 .
Chr2	stalkie_big_nohaplotig	CDS	115790679	115790696	.	-	0	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2321 2339 .
Chr2	stalkie_big_nohaplotig	CDS	115818217	115818218	.	-	2	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2352 2353 .
Chr2	stalkie_big_nohaplotig	CDS	115825005	115825013	.	-	2	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2354 2362 .
Chr2	stalkie_big_nohaplotig	CDS	115832965	115833016	.	-	0	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2363 2420 .
Chr2	stalkie_big_nohaplotig	CDS	115857769	115857906	.	-	0	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2421 2558 .
Chr2	stalkie_big_nohaplotig	CDS	115859082	115859437	.	-	2	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2559 2914 .
Chr2	stalkie_big_nohaplotig	CDS	115875783	115876039	.	-	1	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 2915 3171 .
Chr2	stalkie_big_nohaplotig	CDS	115877090	115877169	.	-	0	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 3172 3251 .
Chr2	stalkie_big_nohaplotig	CDS	115878841	115879092	.	-	0	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 3252 3503 .
Chr2	stalkie_big_nohaplotig	CDS	115879170	115879393	.	-	2	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 3504 3727 .
Chr2	stalkie_big_nohaplotig	CDS	115884194	115884268	.	-	2	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 3728 3802 .
Chr2	stalkie_big_nohaplotig	CDS	115889488	115889539	.	-	0	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 3803 3854 .
Chr2	stalkie_big_nohaplotig	CDS	115889651	115890017	.	-	1	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 3855 4221 .
Chr2	stalkie_big_nohaplotig	CDS	115890084	115890251	.	-	1	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 4222 4389 .
Chr2	stalkie_big_nohaplotig	CDS	115890344	115890589	.	-	1	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 4390 4635 .
Chr2	stalkie_big_nohaplotig	CDS	115891156	115891322	.	-	0	Parent=comp161782_c2_seq1.mrna1;Target=comp161782_c2_seq1 4636 4802 .
Chr2	gffcl	locus	115808137	115809207	.	+	.	ID=RLOC_00020888;geneIDs=ORF1523.path1;transcripts=ORF1523.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	115808137	115809207	.	+	.	ID=ORF1523.mrna1;geneID=ORF1523.path1;Name=ORF1523;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1067;mismatches=4;indels=0;unknowns=0;Target=ORF1523 1071 1 .;locus=RLOC_00020888
Chr2	stalkie_big_nohaplotig	exon	115808137	115809207	99	+	.	Parent=ORF1523.mrna1
Chr2	stalkie_big_nohaplotig	CDS	115808137	115809207	.	+	0	Parent=ORF1523.mrna1
Chr2	gffcl	locus	115810415	115811903	.	+	.	ID=RLOC_00020889;geneIDs=ORF812.path1;transcripts=ORF812.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	115810415	115811903	.	+	.	ID=ORF812.mrna1;geneID=ORF812.path1;Name=ORF812;Dir=sensecoverage=100.0;identity=99.2;matches=1405;mismatches=2;indels=9;unknowns=0;locus=RLOC_00020889
Chr2	stalkie_big_nohaplotig	exon	115810415	115810666	99	+	.	Parent=ORF812.mrna1;Target=ORF812 1 252 +
Chr2	stalkie_big_nohaplotig	exon	115810746	115811903	99	+	.	Parent=ORF812.mrna1;Target=ORF812 253 1413 +
Chr2	stalkie_big_nohaplotig	CDS	115810415	115810666	.	+	0	Parent=ORF812.mrna1;Target=ORF812 1 252 +
Chr2	stalkie_big_nohaplotig	CDS	115810746	115811903	.	+	0	Parent=ORF812.mrna1;Target=ORF812 253 1413 +
Chr2	gffcl	locus	115864620	115866364	.	+	.	ID=RLOC_00020890;geneIDs=comp159234_c0_seq1.path1;transcripts=comp159234_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	115864620	115866364	.	+	.	ID=comp159234_c0_seq1.mrna1;geneID=comp159234_c0_seq1.path1;Name=comp159234_c0_seq1;Dir=antisensecoverage=99.9;identity=99.6;matches=1631;mismatches=6;indels=0;unknowns=0;Target=comp159234_c0_seq1 192 356 .;locus=RLOC_00020890
Chr2	stalkie_big_nohaplotig	exon	115864620	115864973	100	+	.	Parent=comp159234_c0_seq1.mrna1;Target=comp159234_c0_seq1 1286 1639 -
Chr2	stalkie_big_nohaplotig	exon	115865082	115866364	99	+	.	Parent=comp159234_c0_seq1.mrna1;Target=comp159234_c0_seq1 3 1285 -
Chr2	stalkie_big_nohaplotig	CDS	115866011	115866175	.	+	0	Parent=comp159234_c0_seq1.mrna1
Chr2	gffcl	locus	115949408	115953208	.	-	.	ID=RLOC_00020891;geneIDs=comp148903_c0_seq1.path1;transcripts=comp148903_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	115949408	115953208	.	-	.	ID=comp148903_c0_seq1.mrna1;geneID=comp148903_c0_seq1.path1;Name=comp148903_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=875;mismatches=0;indels=1;unknowns=0;Target=comp148903_c0_seq1 3 116 +;locus=RLOC_00020891
Chr2	stalkie_big_nohaplotig	exon	115949408	115949740	99	-	.	Parent=comp148903_c0_seq1.mrna1;Target=comp148903_c0_seq1 544 875 +
Chr2	stalkie_big_nohaplotig	exon	115952666	115953208	100	-	.	Parent=comp148903_c0_seq1.mrna1;Target=comp148903_c0_seq1 1 543 +
Chr2	stalkie_big_nohaplotig	CDS	115953093	115953206	.	-	0	Parent=comp148903_c0_seq1.mrna1
Chr2	gffcl	locus	115956631	115957293	.	+	.	ID=RLOC_00020892;geneIDs=FBgn0028401.1.path1;transcripts=FBgn0028401.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	115956631	115957293	.	+	.	ID=FBgn0028401.1.mrna1;geneID=FBgn0028401.1.path1;Name=FBgn0028401.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=663;mismatches=0;indels=0;unknowns=0;Target=FBgn0028401.1 663 1 .;locus=RLOC_00020892
Chr2	stalkie_big_nohaplotig	exon	115956631	115957293	100	+	.	Parent=FBgn0028401.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	115956631	115957293	.	+	0	Parent=FBgn0028401.1.mrna1
Chr2	gffcl	locus	115961938	115963259	.	-	.	ID=RLOC_00020893;geneIDs=FBgn0037744.1.path1;transcripts=FBgn0037744.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	115961938	115963259	.	-	.	ID=FBgn0037744.1.mrna1;geneID=FBgn0037744.1.path1;Name=FBgn0037744.1;Dir=sensecoverage=100.0;identity=100.0;matches=1206;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020893
Chr2	stalkie_big_nohaplotig	exon	115961938	115962542	100	-	.	Parent=FBgn0037744.1.mrna1;Target=FBgn0037744.1 602 1206 +
Chr2	stalkie_big_nohaplotig	exon	115962602	115962917	100	-	.	Parent=FBgn0037744.1.mrna1;Target=FBgn0037744.1 286 601 +
Chr2	stalkie_big_nohaplotig	exon	115962975	115963259	100	-	.	Parent=FBgn0037744.1.mrna1;Target=FBgn0037744.1 1 285 +
Chr2	stalkie_big_nohaplotig	CDS	115961938	115962542	.	-	2	Parent=FBgn0037744.1.mrna1;Target=FBgn0037744.1 602 1206 +
Chr2	stalkie_big_nohaplotig	CDS	115962602	115962917	.	-	0	Parent=FBgn0037744.1.mrna1;Target=FBgn0037744.1 286 601 +
Chr2	stalkie_big_nohaplotig	CDS	115962975	115963259	.	-	0	Parent=FBgn0037744.1.mrna1;Target=FBgn0037744.1 1 285 +
Chr2	gffcl	locus	115975799	116016546	.	-	.	ID=RLOC_00020894;geneIDs=FBgn0002522.1.path1;transcripts=FBgn0002522.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	115975799	116016546	.	-	.	ID=FBgn0002522.1.mrna1;geneID=FBgn0002522.1.path1;Name=FBgn0002522.1;Dir=sensecoverage=100.0;identity=99.9;matches=1745;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020894
Chr2	stalkie_big_nohaplotig	exon	115975799	115975975	100	-	.	Parent=FBgn0002522.1.mrna1;Target=FBgn0002522.1 1570 1746 +
Chr2	stalkie_big_nohaplotig	exon	115976242	115976552	100	-	.	Parent=FBgn0002522.1.mrna1;Target=FBgn0002522.1 1259 1569 +
Chr2	stalkie_big_nohaplotig	exon	116015289	116016546	99	-	.	Parent=FBgn0002522.1.mrna1;Target=FBgn0002522.1 1 1258 +
Chr2	stalkie_big_nohaplotig	CDS	115975799	115975975	.	-	0	Parent=FBgn0002522.1.mrna1;Target=FBgn0002522.1 1570 1746 +
Chr2	stalkie_big_nohaplotig	CDS	115976242	115976552	.	-	2	Parent=FBgn0002522.1.mrna1;Target=FBgn0002522.1 1259 1569 +
Chr2	stalkie_big_nohaplotig	CDS	116015289	116016546	.	-	0	Parent=FBgn0002522.1.mrna1;Target=FBgn0002522.1 1 1258 +
Chr2	gffcl	locus	116040145	116040516	.	+	.	ID=RLOC_00020895;geneIDs=FBgn0004777.1.path1;transcripts=FBgn0004777.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116040145	116040516	.	+	.	ID=FBgn0004777.1.mrna1;geneID=FBgn0004777.1.path1;Name=FBgn0004777.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=370;mismatches=2;indels=0;unknowns=0;Target=FBgn0004777.1 372 1 .;locus=RLOC_00020895
Chr2	stalkie_big_nohaplotig	exon	116040145	116040516	99	+	.	Parent=FBgn0004777.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	116040145	116040516	.	+	0	Parent=FBgn0004777.1.mrna1
Chr2	gffcl	locus	116050688	116051339	.	-	.	ID=RLOC_00020896;geneIDs=FBgn0004779.1.path1;transcripts=FBgn0004779.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116050688	116051339	.	-	.	ID=FBgn0004779.1.mrna1;geneID=FBgn0004779.1.path1;Name=FBgn0004779.1;Dir=sensecoverage=100.0;identity=99.8;matches=491;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020896
Chr2	stalkie_big_nohaplotig	exon	116050688	116051116	100	-	.	Parent=FBgn0004779.1.mrna1;Target=FBgn0004779.1 64 492 +
Chr2	stalkie_big_nohaplotig	exon	116051277	116051339	98	-	.	Parent=FBgn0004779.1.mrna1;Target=FBgn0004779.1 1 63 +
Chr2	stalkie_big_nohaplotig	CDS	116050688	116051116	.	-	0	Parent=FBgn0004779.1.mrna1;Target=FBgn0004779.1 64 492 +
Chr2	stalkie_big_nohaplotig	CDS	116051277	116051339	.	-	0	Parent=FBgn0004779.1.mrna1;Target=FBgn0004779.1 1 63 +
Chr2	gffcl	locus	116076706	116077364	.	-	.	ID=RLOC_00020897;geneIDs=FBgn0004782.1.path1;transcripts=FBgn0004782.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116076706	116077364	.	-	.	ID=FBgn0004782.1.mrna1;geneID=FBgn0004782.1.path1;Name=FBgn0004782.1;Dir=sensecoverage=100.0;identity=99.3;matches=533;mismatches=4;indels=0;unknowns=0;locus=RLOC_00020897
Chr2	stalkie_big_nohaplotig	exon	116076706	116077146	99	-	.	Parent=FBgn0004782.1.mrna1;Target=FBgn0004782.1 97 537 +
Chr2	stalkie_big_nohaplotig	exon	116077269	116077364	96	-	.	Parent=FBgn0004782.1.mrna1;Target=FBgn0004782.1 1 96 +
Chr2	stalkie_big_nohaplotig	CDS	116076706	116077146	.	-	0	Parent=FBgn0004782.1.mrna1;Target=FBgn0004782.1 97 537 +
Chr2	stalkie_big_nohaplotig	CDS	116077269	116077364	.	-	0	Parent=FBgn0004782.1.mrna1;Target=FBgn0004782.1 1 96 +
Chr2	gffcl	locus	116079092	116080151	.	+	.	ID=RLOC_00020898;geneIDs=comp135990_c0_seq1.path1;transcripts=comp135990_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116079092	116080151	.	+	.	ID=comp135990_c0_seq1.mrna1;geneID=comp135990_c0_seq1.path1;Name=comp135990_c0_seq1;Dir=antisensecoverage=98.5;identity=100.0;matches=333;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020898
Chr2	stalkie_big_nohaplotig	exon	116079092	116079179	100	+	.	Parent=comp135990_c0_seq1.mrna1;Target=comp135990_c0_seq1 251 338 -
Chr2	stalkie_big_nohaplotig	exon	116079907	116080151	100	+	.	Parent=comp135990_c0_seq1.mrna1;Target=comp135990_c0_seq1 6 250 -
Chr2	stalkie_big_nohaplotig	CDS	116079093	116079179	.	+	0	Parent=comp135990_c0_seq1.mrna1;Target=comp135990_c0_seq1 251 337 .
Chr2	stalkie_big_nohaplotig	CDS	116079907	116079996	.	+	0	Parent=comp135990_c0_seq1.mrna1;Target=comp135990_c0_seq1 161 250 .
Chr2	gffcl	locus	116113390	116457506	.	-	.	ID=RLOC_00020899;geneIDs=comp150327_c0_seq1.path1;transcripts=comp150327_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116113390	116457506	.	-	.	ID=comp150327_c0_seq1.mrna1;geneID=comp150327_c0_seq1.path1;Name=comp150327_c0_seq1;Dir=indeterminatecoverage=76.9;identity=92.8;matches=1192;mismatches=45;indels=47;unknowns=0;locus=RLOC_00020899
Chr2	stalkie_big_nohaplotig	exon	116113390	116113400	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1409 1399 .
Chr2	stalkie_big_nohaplotig	exon	116114422	116114426	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1398 1394 .
Chr2	stalkie_big_nohaplotig	exon	116120303	116120319	70	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1393 1377 .
Chr2	stalkie_big_nohaplotig	exon	116125605	116125615	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1376 1366 .
Chr2	stalkie_big_nohaplotig	exon	116133751	116133758	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1333 1326 .
Chr2	stalkie_big_nohaplotig	exon	116134528	116134554	51	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1325 1306 .
Chr2	stalkie_big_nohaplotig	exon	116135555	116135560	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1249 1244 .
Chr2	stalkie_big_nohaplotig	exon	116136070	116136084	93	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1243 1229 .
Chr2	stalkie_big_nohaplotig	exon	116140424	116140432	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1216 1208 .
Chr2	stalkie_big_nohaplotig	exon	116141284	116141287	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1207 1204 .
Chr2	stalkie_big_nohaplotig	exon	116151213	116151221	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1203 1195 .
Chr2	stalkie_big_nohaplotig	exon	116159033	116159041	77	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1194 1186 .
Chr2	stalkie_big_nohaplotig	exon	116165117	116165123	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1185 1179 .
Chr2	stalkie_big_nohaplotig	exon	116169088	116169091	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1178 1175 .
Chr2	stalkie_big_nohaplotig	exon	116173611	116173612	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1174 1173 .
Chr2	stalkie_big_nohaplotig	exon	116181439	116181450	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1172 1161 .
Chr2	stalkie_big_nohaplotig	exon	116195489	116195495	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1160 1154 .
Chr2	stalkie_big_nohaplotig	exon	116195936	116195943	87	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1153 1146 .
Chr2	stalkie_big_nohaplotig	exon	116202725	116202731	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1145 1139 .
Chr2	stalkie_big_nohaplotig	exon	116203401	116203410	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1138 1129 .
Chr2	stalkie_big_nohaplotig	exon	116205702	116205705	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1128 1125 .
Chr2	stalkie_big_nohaplotig	exon	116212021	116212038	33	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1124 1080 .
Chr2	stalkie_big_nohaplotig	exon	116222853	116222863	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1079 1069 .
Chr2	stalkie_big_nohaplotig	exon	116275281	116275345	50	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1068 1003 .
Chr2	stalkie_big_nohaplotig	exon	116279665	116279670	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 1002 997 .
Chr2	stalkie_big_nohaplotig	exon	116280065	116280072	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 996 989 .
Chr2	stalkie_big_nohaplotig	exon	116280074	116280080	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 953 947 .
Chr2	stalkie_big_nohaplotig	exon	116303671	116303673	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 946 944 .
Chr2	stalkie_big_nohaplotig	exon	116329343	116329347	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 943 939 .
Chr2	stalkie_big_nohaplotig	exon	116352702	116352706	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 938 934 .
Chr2	stalkie_big_nohaplotig	exon	116354015	116354022	100	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 933 926 .
Chr2	stalkie_big_nohaplotig	exon	116456589	116457506	99	-	.	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 925 2 .
Chr2	stalkie_big_nohaplotig	CDS	116354021	116354022	.	-	2	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 927 926 .
Chr2	stalkie_big_nohaplotig	CDS	116456589	116456832	.	-	0	Parent=comp150327_c0_seq1.mrna1;Target=comp150327_c0_seq1 925 682 .
Chr2	gffcl	locus	116162503	118076334	.	-	.	ID=RLOC_00020900;geneIDs=comp144718_c0_seq1.path1;transcripts=comp144718_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116162503	118076334	.	-	.	ID=comp144718_c0_seq1.mrna1;geneID=comp144718_c0_seq1.path1;Name=comp144718_c0_seq1;Dir=indeterminatecoverage=86.9;identity=95.4;matches=660;mismatches=21;indels=11;unknowns=0;Target=comp144718_c0_seq1 203 138 .;locus=RLOC_00020900
Chr2	stalkie_big_nohaplotig	exon	116162503	116162509	100	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 800 794 .
Chr2	stalkie_big_nohaplotig	exon	116168886	116168892	100	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 793 787 .
Chr2	stalkie_big_nohaplotig	exon	116171872	116171874	100	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 786 784 .
Chr2	stalkie_big_nohaplotig	exon	116172864	116172868	100	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 783 779 .
Chr2	stalkie_big_nohaplotig	exon	116178931	116178932	100	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 778 777 .
Chr2	stalkie_big_nohaplotig	exon	116181966	116181975	100	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 776 767 .
Chr2	stalkie_big_nohaplotig	exon	116189688	116189701	100	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 713 700 .
Chr2	stalkie_big_nohaplotig	exon	116199306	116199365	50	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 699 647 .
Chr2	stalkie_big_nohaplotig	exon	116213561	116213564	100	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 646 643 .
Chr2	stalkie_big_nohaplotig	exon	116213732	116213735	100	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 642 639 .
Chr2	stalkie_big_nohaplotig	exon	116277153	116277154	100	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 638 637 .
Chr2	stalkie_big_nohaplotig	exon	116285239	116285240	100	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 636 635 .
Chr2	stalkie_big_nohaplotig	exon	116300179	116300181	100	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 634 632 .
Chr2	stalkie_big_nohaplotig	exon	116303748	116303749	100	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 631 630 .
Chr2	stalkie_big_nohaplotig	exon	116307350	116307355	100	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 629 624 .
Chr2	stalkie_big_nohaplotig	exon	116307679	116307683	100	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 623 619 .
Chr2	stalkie_big_nohaplotig	exon	116307964	116307969	100	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 618 613 .
Chr2	stalkie_big_nohaplotig	exon	116307998	116308002	100	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 559 555 .
Chr2	stalkie_big_nohaplotig	exon	116310440	116310444	100	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 554 550 .
Chr2	stalkie_big_nohaplotig	exon	116314599	116314609	100	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 536 526 .
Chr2	stalkie_big_nohaplotig	exon	116315845	116315856	100	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 525 514 .
Chr2	stalkie_big_nohaplotig	exon	116317252	116317255	100	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 513 510 .
Chr2	stalkie_big_nohaplotig	exon	118075826	118076334	99	-	.	Parent=comp144718_c0_seq1.mrna1;Target=comp144718_c0_seq1 509 1 .
Chr2	stalkie_big_nohaplotig	CDS	118076132	118076197	.	-	0	Parent=comp144718_c0_seq1.mrna1
Chr2	gffcl	locus	116200657	116202287	.	-	.	ID=RLOC_00020901;geneIDs=ORF711.path1;transcripts=ORF711.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116200657	116202287	.	-	.	ID=ORF711.mrna1;geneID=ORF711.path1;Name=ORF711;Dir=sensecoverage=100.0;identity=99.9;matches=1502;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020901
Chr2	stalkie_big_nohaplotig	exon	116200657	116201997	100	-	.	Parent=ORF711.mrna1;Target=ORF711 163 1503 +
Chr2	stalkie_big_nohaplotig	exon	116202126	116202287	99	-	.	Parent=ORF711.mrna1;Target=ORF711 1 162 +
Chr2	stalkie_big_nohaplotig	CDS	116200657	116201997	.	-	0	Parent=ORF711.mrna1;Target=ORF711 163 1503 +
Chr2	stalkie_big_nohaplotig	CDS	116202126	116202206	.	-	0	Parent=ORF711.mrna1;Target=ORF711 82 162 +
Chr2	gffcl	locus	116210896	116211944	.	-	.	ID=RLOC_00020902;geneIDs=FBgn0004053.1.path1;transcripts=FBgn0004053.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116210896	116211944	.	-	.	ID=FBgn0004053.1.mrna1;geneID=FBgn0004053.1.path1;Name=FBgn0004053.1;Dir=sensecoverage=100.0;identity=100.0;matches=993;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020902
Chr2	stalkie_big_nohaplotig	exon	116210896	116211828	100	-	.	Parent=FBgn0004053.1.mrna1;Target=FBgn0004053.1 61 993 +
Chr2	stalkie_big_nohaplotig	exon	116211885	116211944	100	-	.	Parent=FBgn0004053.1.mrna1;Target=FBgn0004053.1 1 60 +
Chr2	stalkie_big_nohaplotig	CDS	116210896	116211828	.	-	0	Parent=FBgn0004053.1.mrna1;Target=FBgn0004053.1 61 993 +
Chr2	stalkie_big_nohaplotig	CDS	116211885	116211944	.	-	0	Parent=FBgn0004053.1.mrna1;Target=FBgn0004053.1 1 60 +
Chr2	gffcl	locus	116217503	116219804	.	-	.	ID=RLOC_00020903;geneIDs=comp156547_c0_seq1.path1;transcripts=comp156547_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116217503	116219804	.	-	.	ID=comp156547_c0_seq1.mrna1;geneID=comp156547_c0_seq1.path1;Name=comp156547_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=1824;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020903
Chr2	stalkie_big_nohaplotig	exon	116217503	116217969	100	-	.	Parent=comp156547_c0_seq1.mrna1;Target=comp156547_c0_seq1 1 467 -
Chr2	stalkie_big_nohaplotig	exon	116218031	116218995	100	-	.	Parent=comp156547_c0_seq1.mrna1;Target=comp156547_c0_seq1 468 1432 -
Chr2	stalkie_big_nohaplotig	exon	116219055	116219127	100	-	.	Parent=comp156547_c0_seq1.mrna1;Target=comp156547_c0_seq1 1433 1505 -
Chr2	stalkie_big_nohaplotig	exon	116219486	116219804	100	-	.	Parent=comp156547_c0_seq1.mrna1;Target=comp156547_c0_seq1 1506 1824 -
Chr2	stalkie_big_nohaplotig	CDS	116217901	116217969	.	-	0	Parent=comp156547_c0_seq1.mrna1;Target=comp156547_c0_seq1 399 467 .
Chr2	stalkie_big_nohaplotig	CDS	116218031	116218995	.	-	2	Parent=comp156547_c0_seq1.mrna1;Target=comp156547_c0_seq1 468 1432 .
Chr2	stalkie_big_nohaplotig	CDS	116219055	116219127	.	-	0	Parent=comp156547_c0_seq1.mrna1;Target=comp156547_c0_seq1 1433 1505 .
Chr2	stalkie_big_nohaplotig	CDS	116219486	116219572	.	-	0	Parent=comp156547_c0_seq1.mrna1;Target=comp156547_c0_seq1 1506 1592 .
Chr2	gffcl	locus	116229210	116230247	.	+	.	ID=RLOC_00020904;geneIDs=FBgn0000071.1.path1;transcripts=FBgn0000071.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116229210	116230247	.	+	.	ID=FBgn0000071.1.mrna1;geneID=FBgn0000071.1.path1;Name=FBgn0000071.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1037;mismatches=1;indels=0;unknowns=0;Target=FBgn0000071.1 1038 1 .;locus=RLOC_00020904
Chr2	stalkie_big_nohaplotig	exon	116229210	116230247	99	+	.	Parent=FBgn0000071.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	116229210	116230247	.	+	0	Parent=FBgn0000071.1.mrna1
Chr2	gffcl	locus	116257053	116259739	.	+	.	ID=RLOC_00020905;geneIDs=comp129954_c0_seq1.path1;transcripts=comp129954_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116257053	116259739	.	+	.	ID=comp129954_c0_seq1.mrna1;geneID=comp129954_c0_seq1.path1;Name=comp129954_c0_seq1;Dir=antisensecoverage=98.4;identity=99.6;matches=545;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020905
Chr2	stalkie_big_nohaplotig	exon	116257053	116257181	99	+	.	Parent=comp129954_c0_seq1.mrna1;Target=comp129954_c0_seq1 428 556 -
Chr2	stalkie_big_nohaplotig	exon	116259322	116259739	99	+	.	Parent=comp129954_c0_seq1.mrna1;Target=comp129954_c0_seq1 10 427 -
Chr2	stalkie_big_nohaplotig	CDS	116257055	116257181	.	+	0	Parent=comp129954_c0_seq1.mrna1;Target=comp129954_c0_seq1 428 554 .
Chr2	stalkie_big_nohaplotig	CDS	116259322	116259560	.	+	2	Parent=comp129954_c0_seq1.mrna1;Target=comp129954_c0_seq1 189 427 .
Chr2	gffcl	locus	116295372	116319184	.	.	.	ID=RLOC_00020906;geneIDs=comp51674_c0_seq1.path1,comp116113_c0_seq1.path1;transcripts=comp51674_c0_seq1.mrna1,comp116113_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116295372	116319184	.	-	.	ID=comp51674_c0_seq1.mrna1;geneID=comp51674_c0_seq1.path1;Name=comp51674_c0_seq1;Dir=indeterminatecoverage=37.6;identity=100.0;matches=96;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020906
Chr2	stalkie_big_nohaplotig	exon	116295372	116295381	100	-	.	Parent=comp51674_c0_seq1.mrna1;Target=comp51674_c0_seq1 111 102 .
Chr2	stalkie_big_nohaplotig	exon	116301519	116301523	100	-	.	Parent=comp51674_c0_seq1.mrna1;Target=comp51674_c0_seq1 101 97 .
Chr2	stalkie_big_nohaplotig	exon	116311621	116311627	100	-	.	Parent=comp51674_c0_seq1.mrna1;Target=comp51674_c0_seq1 95 89 .
Chr2	stalkie_big_nohaplotig	exon	116315574	116315583	100	-	.	Parent=comp51674_c0_seq1.mrna1;Target=comp51674_c0_seq1 88 79 .
Chr2	stalkie_big_nohaplotig	exon	116319122	116319184	100	-	.	Parent=comp51674_c0_seq1.mrna1;Target=comp51674_c0_seq1 78 16 .
Chr2	stalkie_big_nohaplotig	CDS	116301521	116301523	.	-	1	Parent=comp51674_c0_seq1.mrna1;Target=comp51674_c0_seq1 99 97 .
Chr2	stalkie_big_nohaplotig	CDS	116311621	116311627	.	-	2	Parent=comp51674_c0_seq1.mrna1;Target=comp51674_c0_seq1 95 89 .
Chr2	stalkie_big_nohaplotig	CDS	116315574	116315583	.	-	0	Parent=comp51674_c0_seq1.mrna1;Target=comp51674_c0_seq1 88 79 .
Chr2	stalkie_big_nohaplotig	CDS	116319122	116319184	.	-	0	Parent=comp51674_c0_seq1.mrna1;Target=comp51674_c0_seq1 78 16 .
Chr2	stalkie_big_nohaplotig	mRNA	116318708	116319139	.	+	.	ID=comp116113_c0_seq1.mrna1;geneID=comp116113_c0_seq1.path1;Name=comp116113_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=431;mismatches=1;indels=0;unknowns=0;Target=comp116113_c0_seq1 432 1 .;CDS_Target=comp116113_c0_seq1 81 1 .;locus=RLOC_00020906
Chr2	stalkie_big_nohaplotig	exon	116318708	116319139	99	+	.	Parent=comp116113_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	116318708	116318788	.	+	0	Parent=comp116113_c0_seq1.mrna1
Chr2	gffcl	locus	116363825	116457506	.	+	.	ID=RLOC_00020907;geneIDs=comp150327_c0_seq1.path2;transcripts=comp150327_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	116363825	116457506	.	+	.	ID=comp150327_c0_seq1.mrna2;geneID=comp150327_c0_seq1.path2;Name=comp150327_c0_seq1;Dir=indeterminatecoverage=76.6;identity=92.0;matches=1089;mismatches=31;indels=64;unknowns=0;Target=comp150327_c0_seq1 1391 1284 .;locus=RLOC_00020907
Chr2	stalkie_big_nohaplotig	exon	116363825	116363834	100	+	.	Parent=comp150327_c0_seq1.mrna2;Target=comp150327_c0_seq1 438 429 .
Chr2	stalkie_big_nohaplotig	exon	116372128	116372140	31	+	.	Parent=comp150327_c0_seq1.mrna2;Target=comp150327_c0_seq1 473 439 .
Chr2	stalkie_big_nohaplotig	exon	116372631	116372643	76	+	.	Parent=comp150327_c0_seq1.mrna2;Target=comp150327_c0_seq1 486 474 .
Chr2	stalkie_big_nohaplotig	exon	116380699	116380706	100	+	.	Parent=comp150327_c0_seq1.mrna2;Target=comp150327_c0_seq1 494 487 .
Chr2	stalkie_big_nohaplotig	exon	116383429	116383430	100	+	.	Parent=comp150327_c0_seq1.mrna2;Target=comp150327_c0_seq1 496 495 .
Chr2	stalkie_big_nohaplotig	exon	116384227	116384230	100	+	.	Parent=comp150327_c0_seq1.mrna2;Target=comp150327_c0_seq1 500 497 .
Chr2	stalkie_big_nohaplotig	exon	116389203	116389206	100	+	.	Parent=comp150327_c0_seq1.mrna2;Target=comp150327_c0_seq1 504 501 .
Chr2	stalkie_big_nohaplotig	exon	116389715	116389721	100	+	.	Parent=comp150327_c0_seq1.mrna2;Target=comp150327_c0_seq1 511 505 .
Chr2	stalkie_big_nohaplotig	exon	116396643	116396710	56	+	.	Parent=comp150327_c0_seq1.mrna2;Target=comp150327_c0_seq1 589 512 .
Chr2	stalkie_big_nohaplotig	exon	116400883	116400890	100	+	.	Parent=comp150327_c0_seq1.mrna2;Target=comp150327_c0_seq1 624 617 .
Chr2	stalkie_big_nohaplotig	exon	116405204	116405212	100	+	.	Parent=comp150327_c0_seq1.mrna2;Target=comp150327_c0_seq1 674 666 .
Chr2	stalkie_big_nohaplotig	exon	116407371	116407374	37	+	.	Parent=comp150327_c0_seq1.mrna2;Target=comp150327_c0_seq1 684 677 .
Chr2	stalkie_big_nohaplotig	exon	116413405	116413411	100	+	.	Parent=comp150327_c0_seq1.mrna2;Target=comp150327_c0_seq1 691 685 .
Chr2	stalkie_big_nohaplotig	exon	116415245	116415259	80	+	.	Parent=comp150327_c0_seq1.mrna2;Target=comp150327_c0_seq1 706 692 .
Chr2	stalkie_big_nohaplotig	exon	116424485	116424488	100	+	.	Parent=comp150327_c0_seq1.mrna2;Target=comp150327_c0_seq1 710 707 .
Chr2	stalkie_big_nohaplotig	exon	116426903	116426907	100	+	.	Parent=comp150327_c0_seq1.mrna2;Target=comp150327_c0_seq1 820 816 .
Chr2	stalkie_big_nohaplotig	exon	116435481	116435492	100	+	.	Parent=comp150327_c0_seq1.mrna2;Target=comp150327_c0_seq1 833 822 .
Chr2	stalkie_big_nohaplotig	exon	116456562	116457506	97	+	.	Parent=comp150327_c0_seq1.mrna2;Target=comp150327_c0_seq1 1829 899 .
Chr2	stalkie_big_nohaplotig	CDS	116456967	116457074	.	+	0	Parent=comp150327_c0_seq1.mrna2
Chr2	gffcl	locus	116389932	116390308	.	-	.	ID=RLOC_00020908;geneIDs=FBgn0011476.1.path1;transcripts=FBgn0011476.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116389932	116390308	.	-	.	ID=FBgn0011476.1.mrna1;geneID=FBgn0011476.1.path1;Name=FBgn0011476.1;Dir=sensecoverage=100.0;identity=100.0;matches=309;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020908
Chr2	stalkie_big_nohaplotig	exon	116389932	116390112	100	-	.	Parent=FBgn0011476.1.mrna1;Target=FBgn0011476.1 129 309 +
Chr2	stalkie_big_nohaplotig	exon	116390181	116390308	100	-	.	Parent=FBgn0011476.1.mrna1;Target=FBgn0011476.1 1 128 +
Chr2	stalkie_big_nohaplotig	CDS	116389932	116390112	.	-	1	Parent=FBgn0011476.1.mrna1;Target=FBgn0011476.1 129 309 +
Chr2	stalkie_big_nohaplotig	CDS	116390181	116390308	.	-	0	Parent=FBgn0011476.1.mrna1;Target=FBgn0011476.1 1 128 +
Chr2	gffcl	locus	116396892	116397365	.	+	.	ID=RLOC_00020910;geneIDs=comp116271_c0_seq1.path1;transcripts=comp116271_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116396892	116397365	.	+	.	ID=comp116271_c0_seq1.mrna1;geneID=comp116271_c0_seq1.path1;Name=comp116271_c0_seq1;Dir=indeterminatecoverage=98.1;identity=99.2;matches=470;mismatches=4;indels=0;unknowns=0;Target=comp116271_c0_seq1 483 10 .;CDS_Target=comp116271_c0_seq1 436 347 .;locus=RLOC_00020910
Chr2	stalkie_big_nohaplotig	exon	116396892	116397365	99	+	.	Parent=comp116271_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	116397229	116397318	.	+	0	Parent=comp116271_c0_seq1.mrna1
Chr2	gffcl	locus	116397891	116399923	.	-	.	ID=RLOC_00020911;geneIDs=FBgn0038312.1.path1;transcripts=FBgn0038312.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116397891	116399923	.	-	.	ID=FBgn0038312.1.mrna1;geneID=FBgn0038312.1.path1;Name=FBgn0038312.1;Dir=sensecoverage=99.1;identity=100.0;matches=1153;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020911
Chr2	stalkie_big_nohaplotig	exon	116397891	116398011	100	-	.	Parent=FBgn0038312.1.mrna1;Target=FBgn0038312.1 1033 1153 +
Chr2	stalkie_big_nohaplotig	exon	116398073	116398333	100	-	.	Parent=FBgn0038312.1.mrna1;Target=FBgn0038312.1 772 1032 +
Chr2	stalkie_big_nohaplotig	exon	116399033	116399324	100	-	.	Parent=FBgn0038312.1.mrna1;Target=FBgn0038312.1 480 771 +
Chr2	stalkie_big_nohaplotig	exon	116399393	116399625	100	-	.	Parent=FBgn0038312.1.mrna1;Target=FBgn0038312.1 247 479 +
Chr2	stalkie_big_nohaplotig	exon	116399678	116399923	100	-	.	Parent=FBgn0038312.1.mrna1;Target=FBgn0038312.1 1 246 +
Chr2	stalkie_big_nohaplotig	CDS	116397892	116398011	.	-	0	Parent=FBgn0038312.1.mrna1;Target=FBgn0038312.1 1033 1152 +
Chr2	stalkie_big_nohaplotig	CDS	116398073	116398333	.	-	0	Parent=FBgn0038312.1.mrna1;Target=FBgn0038312.1 772 1032 +
Chr2	stalkie_big_nohaplotig	CDS	116399033	116399324	.	-	1	Parent=FBgn0038312.1.mrna1;Target=FBgn0038312.1 480 771 +
Chr2	stalkie_big_nohaplotig	CDS	116399393	116399625	.	-	0	Parent=FBgn0038312.1.mrna1;Target=FBgn0038312.1 247 479 +
Chr2	stalkie_big_nohaplotig	CDS	116399678	116399923	.	-	0	Parent=FBgn0038312.1.mrna1;Target=FBgn0038312.1 1 246 +
Chr2	gffcl	locus	116406368	116407307	.	-	.	ID=RLOC_00020912;geneIDs=FBgn0016691.1.path1;transcripts=FBgn0016691.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116406368	116407307	.	-	.	ID=FBgn0016691.1.mrna1;geneID=FBgn0016691.1.path1;Name=FBgn0016691.1;Dir=sensecoverage=100.0;identity=100.0;matches=681;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020912
Chr2	stalkie_big_nohaplotig	exon	116406368	116406520	100	-	.	Parent=FBgn0016691.1.mrna1;Target=FBgn0016691.1 529 681 +
Chr2	stalkie_big_nohaplotig	exon	116406578	116407015	100	-	.	Parent=FBgn0016691.1.mrna1;Target=FBgn0016691.1 91 528 +
Chr2	stalkie_big_nohaplotig	exon	116407218	116407307	100	-	.	Parent=FBgn0016691.1.mrna1;Target=FBgn0016691.1 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	116406368	116406520	.	-	0	Parent=FBgn0016691.1.mrna1;Target=FBgn0016691.1 529 681 +
Chr2	stalkie_big_nohaplotig	CDS	116406578	116407015	.	-	0	Parent=FBgn0016691.1.mrna1;Target=FBgn0016691.1 91 528 +
Chr2	stalkie_big_nohaplotig	CDS	116407218	116407307	.	-	0	Parent=FBgn0016691.1.mrna1;Target=FBgn0016691.1 1 90 +
Chr2	gffcl	locus	116430427	116431724	.	-	.	ID=RLOC_00020913;geneIDs=FBgn0014879.1.path1;transcripts=FBgn0014879.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116430427	116431724	.	-	.	ID=FBgn0014879.1.mrna1;geneID=FBgn0014879.1.path1;Name=FBgn0014879.1;Dir=sensecoverage=99.0;identity=100.0;matches=775;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020913
Chr2	stalkie_big_nohaplotig	exon	116430427	116430523	100	-	.	Parent=FBgn0014879.1.mrna1;Target=FBgn0014879.1 679 775 +
Chr2	stalkie_big_nohaplotig	exon	116430577	116430818	100	-	.	Parent=FBgn0014879.1.mrna1;Target=FBgn0014879.1 437 678 +
Chr2	stalkie_big_nohaplotig	exon	116430882	116431071	100	-	.	Parent=FBgn0014879.1.mrna1;Target=FBgn0014879.1 247 436 +
Chr2	stalkie_big_nohaplotig	exon	116431479	116431724	100	-	.	Parent=FBgn0014879.1.mrna1;Target=FBgn0014879.1 1 246 +
Chr2	stalkie_big_nohaplotig	CDS	116430428	116430523	.	-	0	Parent=FBgn0014879.1.mrna1;Target=FBgn0014879.1 679 774 +
Chr2	stalkie_big_nohaplotig	CDS	116430577	116430818	.	-	2	Parent=FBgn0014879.1.mrna1;Target=FBgn0014879.1 437 678 +
Chr2	stalkie_big_nohaplotig	CDS	116430882	116431071	.	-	0	Parent=FBgn0014879.1.mrna1;Target=FBgn0014879.1 247 436 +
Chr2	stalkie_big_nohaplotig	CDS	116431479	116431724	.	-	0	Parent=FBgn0014879.1.mrna1;Target=FBgn0014879.1 1 246 +
Chr2	gffcl	locus	116433221	116440702	.	+	.	ID=RLOC_00020914;geneIDs=FBgn0263740.1.path1,FBgn0263755.1.path1;transcripts=FBgn0263740.1.mrna1,FBgn0263755.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116433221	116440702	.	+	.	ID=FBgn0263740.1.mrna1;geneID=FBgn0263740.1.path1;Name=FBgn0263740.1;Dir=sensecoverage=100.0;identity=100.0;matches=1467;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020914
Chr2	stalkie_big_nohaplotig	exon	116433221	116433310	100	+	.	Parent=FBgn0263740.1.mrna1;Target=FBgn0263740.1 1 90 +
Chr2	stalkie_big_nohaplotig	exon	116434044	116434218	100	+	.	Parent=FBgn0263740.1.mrna1;Target=FBgn0263740.1 91 265 +
Chr2	stalkie_big_nohaplotig	exon	116439330	116439566	100	+	.	Parent=FBgn0263740.1.mrna1;Target=FBgn0263740.1 266 502 +
Chr2	stalkie_big_nohaplotig	exon	116439622	116439839	100	+	.	Parent=FBgn0263740.1.mrna1;Target=FBgn0263740.1 503 720 +
Chr2	stalkie_big_nohaplotig	exon	116439896	116440551	100	+	.	Parent=FBgn0263740.1.mrna1;Target=FBgn0263740.1 721 1376 +
Chr2	stalkie_big_nohaplotig	exon	116440612	116440702	100	+	.	Parent=FBgn0263740.1.mrna1;Target=FBgn0263740.1 1377 1467 +
Chr2	stalkie_big_nohaplotig	CDS	116433221	116433310	.	+	0	Parent=FBgn0263740.1.mrna1;Target=FBgn0263740.1 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	116434044	116434218	.	+	0	Parent=FBgn0263740.1.mrna1;Target=FBgn0263740.1 91 265 +
Chr2	stalkie_big_nohaplotig	CDS	116439330	116439566	.	+	2	Parent=FBgn0263740.1.mrna1;Target=FBgn0263740.1 266 502 +
Chr2	stalkie_big_nohaplotig	CDS	116439622	116439839	.	+	2	Parent=FBgn0263740.1.mrna1;Target=FBgn0263740.1 503 720 +
Chr2	stalkie_big_nohaplotig	CDS	116439896	116440551	.	+	0	Parent=FBgn0263740.1.mrna1;Target=FBgn0263740.1 721 1376 +
Chr2	stalkie_big_nohaplotig	CDS	116440612	116440702	.	+	1	Parent=FBgn0263740.1.mrna1;Target=FBgn0263740.1 1377 1467 +
Chr2	stalkie_big_nohaplotig	mRNA	116434197	116438300	.	+	.	ID=FBgn0263755.1.mrna1;geneID=FBgn0263755.1.path1;Name=FBgn0263755.1;Dir=sensecoverage=100.0;identity=100.0;matches=1737;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020914
Chr2	stalkie_big_nohaplotig	exon	116434197	116434218	100	+	.	Parent=FBgn0263755.1.mrna1;Target=FBgn0263755.1 1 22 +
Chr2	stalkie_big_nohaplotig	exon	116436586	116438300	100	+	.	Parent=FBgn0263755.1.mrna1;Target=FBgn0263755.1 23 1737 +
Chr2	stalkie_big_nohaplotig	CDS	116434197	116434218	.	+	0	Parent=FBgn0263755.1.mrna1;Target=FBgn0263755.1 1 22 +
Chr2	stalkie_big_nohaplotig	CDS	116436586	116438300	.	+	2	Parent=FBgn0263755.1.mrna1;Target=FBgn0263755.1 23 1737 +
Chr2	gffcl	locus	116438572	116438981	.	+	.	ID=RLOC_00020915;geneIDs=comp142356_c0_seq1.path1;transcripts=comp142356_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116438572	116438981	.	+	.	ID=comp142356_c0_seq1.mrna1;geneID=comp142356_c0_seq1.path1;Name=comp142356_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=409;mismatches=1;indels=0;unknowns=0;Target=comp142356_c0_seq1 410 1 .;CDS_Target=comp142356_c0_seq1 208 131 .;locus=RLOC_00020915
Chr2	stalkie_big_nohaplotig	exon	116438572	116438981	99	+	.	Parent=comp142356_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	116438702	116438779	.	+	0	Parent=comp142356_c0_seq1.mrna1
Chr2	gffcl	locus	116442555	116446511	.	-	.	ID=RLOC_00020916;geneIDs=FBgn0038318.1.path1;transcripts=FBgn0038318.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116442555	116446511	.	-	.	ID=FBgn0038318.1.mrna1;geneID=FBgn0038318.1.path1;Name=FBgn0038318.1;Dir=sensecoverage=100.0;identity=100.0;matches=2090;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020916
Chr2	stalkie_big_nohaplotig	exon	116442555	116443225	100	-	.	Parent=FBgn0038318.1.mrna1;Target=FBgn0038318.1 1421 2091 +
Chr2	stalkie_big_nohaplotig	exon	116443297	116443475	100	-	.	Parent=FBgn0038318.1.mrna1;Target=FBgn0038318.1 1242 1420 +
Chr2	stalkie_big_nohaplotig	exon	116444964	116445145	100	-	.	Parent=FBgn0038318.1.mrna1;Target=FBgn0038318.1 1060 1241 +
Chr2	stalkie_big_nohaplotig	exon	116445201	116445413	100	-	.	Parent=FBgn0038318.1.mrna1;Target=FBgn0038318.1 847 1059 +
Chr2	stalkie_big_nohaplotig	exon	116445482	116445812	100	-	.	Parent=FBgn0038318.1.mrna1;Target=FBgn0038318.1 516 846 +
Chr2	stalkie_big_nohaplotig	exon	116445870	116446057	100	-	.	Parent=FBgn0038318.1.mrna1;Target=FBgn0038318.1 328 515 +
Chr2	stalkie_big_nohaplotig	exon	116446115	116446268	100	-	.	Parent=FBgn0038318.1.mrna1;Target=FBgn0038318.1 174 327 +
Chr2	stalkie_big_nohaplotig	exon	116446339	116446511	99	-	.	Parent=FBgn0038318.1.mrna1;Target=FBgn0038318.1 1 173 +
Chr2	stalkie_big_nohaplotig	CDS	116442555	116443225	.	-	2	Parent=FBgn0038318.1.mrna1;Target=FBgn0038318.1 1421 2091 +
Chr2	stalkie_big_nohaplotig	CDS	116443297	116443475	.	-	1	Parent=FBgn0038318.1.mrna1;Target=FBgn0038318.1 1242 1420 +
Chr2	stalkie_big_nohaplotig	CDS	116444964	116445145	.	-	0	Parent=FBgn0038318.1.mrna1;Target=FBgn0038318.1 1060 1241 +
Chr2	stalkie_big_nohaplotig	CDS	116445201	116445413	.	-	0	Parent=FBgn0038318.1.mrna1;Target=FBgn0038318.1 847 1059 +
Chr2	stalkie_big_nohaplotig	CDS	116445482	116445812	.	-	1	Parent=FBgn0038318.1.mrna1;Target=FBgn0038318.1 516 846 +
Chr2	stalkie_big_nohaplotig	CDS	116445870	116446057	.	-	0	Parent=FBgn0038318.1.mrna1;Target=FBgn0038318.1 328 515 +
Chr2	stalkie_big_nohaplotig	CDS	116446115	116446268	.	-	1	Parent=FBgn0038318.1.mrna1;Target=FBgn0038318.1 174 327 +
Chr2	stalkie_big_nohaplotig	CDS	116446339	116446511	.	-	0	Parent=FBgn0038318.1.mrna1;Target=FBgn0038318.1 1 173 +
Chr2	gffcl	locus	116453606	116456012	.	-	.	ID=RLOC_00020917;geneIDs=FBgn0037846.1.path1;transcripts=FBgn0037846.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116453606	116456012	.	-	.	ID=FBgn0037846.1.mrna1;geneID=FBgn0037846.1.path1;Name=FBgn0037846.1;Dir=sensecoverage=100.0;identity=99.9;matches=1366;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020917
Chr2	stalkie_big_nohaplotig	exon	116453606	116453858	99	-	.	Parent=FBgn0037846.1.mrna1;Target=FBgn0037846.1 1116 1368 +
Chr2	stalkie_big_nohaplotig	exon	116453992	116454233	100	-	.	Parent=FBgn0037846.1.mrna1;Target=FBgn0037846.1 874 1115 +
Chr2	stalkie_big_nohaplotig	exon	116454287	116454645	99	-	.	Parent=FBgn0037846.1.mrna1;Target=FBgn0037846.1 515 873 +
Chr2	stalkie_big_nohaplotig	exon	116454700	116455001	100	-	.	Parent=FBgn0037846.1.mrna1;Target=FBgn0037846.1 213 514 +
Chr2	stalkie_big_nohaplotig	exon	116455677	116455759	100	-	.	Parent=FBgn0037846.1.mrna1;Target=FBgn0037846.1 130 212 +
Chr2	stalkie_big_nohaplotig	exon	116455884	116456012	100	-	.	Parent=FBgn0037846.1.mrna1;Target=FBgn0037846.1 1 129 +
Chr2	stalkie_big_nohaplotig	CDS	116453606	116453858	.	-	1	Parent=FBgn0037846.1.mrna1;Target=FBgn0037846.1 1116 1368 +
Chr2	stalkie_big_nohaplotig	CDS	116453992	116454233	.	-	0	Parent=FBgn0037846.1.mrna1;Target=FBgn0037846.1 874 1115 +
Chr2	stalkie_big_nohaplotig	CDS	116454287	116454645	.	-	2	Parent=FBgn0037846.1.mrna1;Target=FBgn0037846.1 515 873 +
Chr2	stalkie_big_nohaplotig	CDS	116454700	116455001	.	-	1	Parent=FBgn0037846.1.mrna1;Target=FBgn0037846.1 213 514 +
Chr2	stalkie_big_nohaplotig	CDS	116455677	116455759	.	-	0	Parent=FBgn0037846.1.mrna1;Target=FBgn0037846.1 130 212 +
Chr2	stalkie_big_nohaplotig	CDS	116455884	116456012	.	-	0	Parent=FBgn0037846.1.mrna1;Target=FBgn0037846.1 1 129 +
Chr2	gffcl	locus	116460843	116468436	.	.	.	ID=RLOC_00020918;geneIDs=FBgn0037847.1.path1,comp161101_c0_seq1.path1;transcripts=comp161101_c0_seq1.mrna1,FBgn0037847.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116460843	116464140	.	+	.	ID=comp161101_c0_seq1.mrna1;geneID=comp161101_c0_seq1.path1;Name=comp161101_c0_seq1;Dir=indeterminatecoverage=99.1;identity=97.5;matches=3221;mismatches=27;indels=57;unknowns=0;Target=comp161101_c0_seq1 3286 32 .;CDS_Target=comp161101_c0_seq1 2210 2058 .;locus=RLOC_00020918
Chr2	stalkie_big_nohaplotig	exon	116460843	116464140	97	+	.	Parent=comp161101_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	116462911	116463063	.	+	0	Parent=comp161101_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116461242	116468436	.	-	.	ID=FBgn0037847.1.mrna1;geneID=FBgn0037847.1.path1;Name=FBgn0037847.1;Dir=sensecoverage=100.0;identity=99.8;matches=497;mismatches=0;indels=1;unknowns=0;Target=FBgn0037847.1 3 47 +;locus=RLOC_00020918
Chr2	stalkie_big_nohaplotig	exon	116461242	116461426	100	-	.	Parent=FBgn0037847.1.mrna1;Target=FBgn0037847.1 314 498 +
Chr2	stalkie_big_nohaplotig	exon	116468069	116468233	100	-	.	Parent=FBgn0037847.1.mrna1;Target=FBgn0037847.1 149 313 +
Chr2	stalkie_big_nohaplotig	exon	116468290	116468436	99	-	.	Parent=FBgn0037847.1.mrna1;Target=FBgn0037847.1 1 148 +
Chr2	stalkie_big_nohaplotig	CDS	116468391	116468434	.	-	0	Parent=FBgn0037847.1.mrna1
Chr2	gffcl	locus	116466000	116467570	.	-	.	ID=RLOC_00020919;geneIDs=comp157942_c0_seq1.path1;transcripts=comp157942_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116466000	116467570	.	-	.	ID=comp157942_c0_seq1.mrna1;geneID=comp157942_c0_seq1.path1;Name=comp157942_c0_seq1;Dir=indeterminatecoverage=96.0;identity=95.2;matches=1534;mismatches=11;indels=66;unknowns=0;Target=comp157942_c0_seq1 1601 17 .;CDS_Target=comp157942_c0_seq1 948 775 .;locus=RLOC_00020919
Chr2	stalkie_big_nohaplotig	exon	116466000	116467570	95	-	.	Parent=comp157942_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	116466634	116466809	.	-	0	Parent=comp157942_c0_seq1.mrna1
Chr2	gffcl	locus	116480191	116497062	.	+	.	ID=RLOC_00020920;geneIDs=FBgn0083969.1.path1;transcripts=FBgn0083969.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116480191	116497062	.	+	.	ID=FBgn0083969.1.mrna1;geneID=FBgn0083969.1.path1;Name=FBgn0083969.1;Dir=sensecoverage=100.0;identity=99.3;matches=3440;mismatches=19;indels=6;unknowns=0;locus=RLOC_00020920
Chr2	stalkie_big_nohaplotig	exon	116480191	116480312	100	+	.	Parent=FBgn0083969.1.mrna1;Target=FBgn0083969.1 1 122 +
Chr2	stalkie_big_nohaplotig	exon	116480378	116480582	98	+	.	Parent=FBgn0083969.1.mrna1;Target=FBgn0083969.1 123 327 +
Chr2	stalkie_big_nohaplotig	exon	116492377	116492515	100	+	.	Parent=FBgn0083969.1.mrna1;Target=FBgn0083969.1 328 466 +
Chr2	stalkie_big_nohaplotig	exon	116492577	116493549	99	+	.	Parent=FBgn0083969.1.mrna1;Target=FBgn0083969.1 467 1433 +
Chr2	stalkie_big_nohaplotig	exon	116493602	116493802	100	+	.	Parent=FBgn0083969.1.mrna1;Target=FBgn0083969.1 1434 1634 +
Chr2	stalkie_big_nohaplotig	exon	116494565	116495159	98	+	.	Parent=FBgn0083969.1.mrna1;Target=FBgn0083969.1 1635 2229 +
Chr2	stalkie_big_nohaplotig	exon	116495642	116495773	99	+	.	Parent=FBgn0083969.1.mrna1;Target=FBgn0083969.1 2230 2361 +
Chr2	stalkie_big_nohaplotig	exon	116495840	116496655	99	+	.	Parent=FBgn0083969.1.mrna1;Target=FBgn0083969.1 2362 3177 +
Chr2	stalkie_big_nohaplotig	exon	116496719	116496847	100	+	.	Parent=FBgn0083969.1.mrna1;Target=FBgn0083969.1 3178 3306 +
Chr2	stalkie_big_nohaplotig	exon	116496910	116497062	100	+	.	Parent=FBgn0083969.1.mrna1;Target=FBgn0083969.1 3307 3459 +
Chr2	stalkie_big_nohaplotig	CDS	116480191	116480312	.	+	0	Parent=FBgn0083969.1.mrna1;Target=FBgn0083969.1 1 122 +
Chr2	stalkie_big_nohaplotig	CDS	116480378	116480582	.	+	1	Parent=FBgn0083969.1.mrna1;Target=FBgn0083969.1 123 327 +
Chr2	stalkie_big_nohaplotig	CDS	116492377	116492515	.	+	0	Parent=FBgn0083969.1.mrna1;Target=FBgn0083969.1 328 466 +
Chr2	stalkie_big_nohaplotig	CDS	116492577	116493549	.	+	2	Parent=FBgn0083969.1.mrna1;Target=FBgn0083969.1 467 1433 +
Chr2	stalkie_big_nohaplotig	CDS	116493602	116493802	.	+	1	Parent=FBgn0083969.1.mrna1;Target=FBgn0083969.1 1434 1634 +
Chr2	stalkie_big_nohaplotig	CDS	116494565	116495159	.	+	1	Parent=FBgn0083969.1.mrna1;Target=FBgn0083969.1 1635 2229 +
Chr2	stalkie_big_nohaplotig	CDS	116495642	116495773	.	+	0	Parent=FBgn0083969.1.mrna1;Target=FBgn0083969.1 2230 2361 +
Chr2	stalkie_big_nohaplotig	CDS	116495840	116496655	.	+	0	Parent=FBgn0083969.1.mrna1;Target=FBgn0083969.1 2362 3177 +
Chr2	stalkie_big_nohaplotig	CDS	116496719	116496847	.	+	0	Parent=FBgn0083969.1.mrna1;Target=FBgn0083969.1 3178 3306 +
Chr2	stalkie_big_nohaplotig	CDS	116496910	116497062	.	+	0	Parent=FBgn0083969.1.mrna1;Target=FBgn0083969.1 3307 3459 +
Chr2	gffcl	locus	116497462	116499756	.	-	.	ID=RLOC_00020921;geneIDs=comp163516_c0_seq1.path1;transcripts=comp163516_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116497462	116499756	.	-	.	ID=comp163516_c0_seq1.mrna1;geneID=comp163516_c0_seq1.path1;Name=comp163516_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.9;matches=2255;mismatches=37;indels=34;unknowns=0;Target=comp163516_c0_seq1 2323 1 .;CDS_Target=comp163516_c0_seq1 1768 1613 .;locus=RLOC_00020921
Chr2	stalkie_big_nohaplotig	exon	116497462	116499756	96	-	.	Parent=comp163516_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	116498008	116498163	.	-	0	Parent=comp163516_c0_seq1.mrna1
Chr2	gffcl	locus	116525030	116525447	.	+	.	ID=RLOC_00020922;geneIDs=comp152357_c0_seq1.path1;transcripts=comp152357_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116525030	116525447	.	+	.	ID=comp152357_c0_seq1.mrna1;geneID=comp152357_c0_seq1.path1;Name=comp152357_c0_seq1;Dir=sensecoverage=93.3;identity=97.6;matches=326;mismatches=8;indels=0;unknowns=0;locus=RLOC_00020922
Chr2	stalkie_big_nohaplotig	exon	116525030	116525158	96	+	.	Parent=comp152357_c0_seq1.mrna1;Target=comp152357_c0_seq1 2 130 +
Chr2	stalkie_big_nohaplotig	exon	116525243	116525447	98	+	.	Parent=comp152357_c0_seq1.mrna1;Target=comp152357_c0_seq1 131 335 +
Chr2	stalkie_big_nohaplotig	CDS	116525095	116525158	.	+	0	Parent=comp152357_c0_seq1.mrna1;Target=comp152357_c0_seq1 67 130 +
Chr2	stalkie_big_nohaplotig	CDS	116525243	116525364	.	+	2	Parent=comp152357_c0_seq1.mrna1;Target=comp152357_c0_seq1 131 252 +
Chr2	gffcl	locus	116564092	116565208	.	-	.	ID=RLOC_00020923;geneIDs=comp116563_c0_seq1.path1,comp154396_c0_seq1.path1;transcripts=comp154396_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116564568	116565208	.	-	.	ID=comp154396_c0_seq1.mrna1;geneID=comp154396_c0_seq1.path1;Name=comp154396_c0_seq1;Dir=indeterminatecoverage=91.2;identity=100.0;matches=641;mismatches=0;indels=0;unknowns=0;Target=comp154396_c0_seq1 641 1 .;CDS_Target=comp154396_c0_seq1 291 154 .;locus=RLOC_00020923
Chr2	stalkie_big_nohaplotig	exon	116564568	116565208	100	-	.	Parent=comp154396_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	116564918	116565055	.	-	0	Parent=comp154396_c0_seq1.mrna1
Chr2	gffcl	locus	116565974	116566978	.	.	.	ID=RLOC_00020924;geneIDs=comp122359_c0_seq1.path1,comp153209_c0_seq1.path1;transcripts=comp153209_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116565974	116566601	.	-	.	ID=comp153209_c0_seq1.mrna1;geneID=comp153209_c0_seq1.path1;Name=comp153209_c0_seq1;Dir=indeterminatecoverage=94.7;identity=99.8;matches=627;mismatches=1;indels=0;unknowns=0;Target=comp153209_c0_seq1 628 1 .;CDS_Target=comp153209_c0_seq1 67 2 .;locus=RLOC_00020924
Chr2	stalkie_big_nohaplotig	exon	116565974	116566601	99	-	.	Parent=comp153209_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	116566535	116566600	.	-	0	Parent=comp153209_c0_seq1.mrna1
Chr2	gffcl	locus	116701005	118455153	.	-	.	ID=RLOC_00020926;geneIDs=comp150744_c0_seq1.path1;transcripts=comp150744_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116701005	118455153	.	-	.	ID=comp150744_c0_seq1.mrna1;geneID=comp150744_c0_seq1.path1;Name=comp150744_c0_seq1;Dir=sensecoverage=78.3;identity=91.7;matches=461;mismatches=29;indels=13;unknowns=0;Target=comp150744_c0_seq1 234 290 +;locus=RLOC_00020926
Chr2	stalkie_big_nohaplotig	exon	116701005	116701047	76	-	.	Parent=comp150744_c0_seq1.mrna1;Target=comp150744_c0_seq1 497 533 +
Chr2	stalkie_big_nohaplotig	exon	116703962	116703965	100	-	.	Parent=comp150744_c0_seq1.mrna1;Target=comp150744_c0_seq1 493 496 +
Chr2	stalkie_big_nohaplotig	exon	116704210	116704214	100	-	.	Parent=comp150744_c0_seq1.mrna1;Target=comp150744_c0_seq1 488 492 +
Chr2	stalkie_big_nohaplotig	exon	116713068	116713070	100	-	.	Parent=comp150744_c0_seq1.mrna1;Target=comp150744_c0_seq1 485 487 +
Chr2	stalkie_big_nohaplotig	exon	116718883	116718890	100	-	.	Parent=comp150744_c0_seq1.mrna1;Target=comp150744_c0_seq1 477 484 +
Chr2	stalkie_big_nohaplotig	exon	118454715	118455153	92	-	.	Parent=comp150744_c0_seq1.mrna1;Target=comp150744_c0_seq1 43 476 +
Chr2	stalkie_big_nohaplotig	CDS	118454901	118454962	.	-	0	Parent=comp150744_c0_seq1.mrna1
Chr2	gffcl	locus	116721668	116722255	.	-	.	ID=RLOC_00020927;geneIDs=comp143292_c0_seq1.path1;transcripts=comp143292_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116721668	116722255	.	-	.	ID=comp143292_c0_seq1.mrna1;geneID=comp143292_c0_seq1.path1;Name=comp143292_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.3;matches=584;mismatches=3;indels=1;unknowns=0;Target=comp143292_c0_seq1 587 1 .;CDS_Target=comp143292_c0_seq1 387 271 .;locus=RLOC_00020927
Chr2	stalkie_big_nohaplotig	exon	116721668	116722255	99	-	.	Parent=comp143292_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	116721869	116721985	.	-	0	Parent=comp143292_c0_seq1.mrna1
Chr2	gffcl	locus	116738047	116810505	.	.	.	ID=RLOC_00020928;geneIDs=FBgn0003339.1.path1,comp162753_c1_seq1.path2;transcripts=FBgn0003339.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116738047	116810098	.	+	.	ID=FBgn0003339.1.mrna1;geneID=FBgn0003339.1.path1;Name=FBgn0003339.1;Dir=sensecoverage=100.0;identity=99.9;matches=1079;mismatches=1;indels=0;unknowns=0;locus=RLOC_00020928
Chr2	stalkie_big_nohaplotig	exon	116738047	116738947	99	+	.	Parent=FBgn0003339.1.mrna1;Target=FBgn0003339.1 1 901 +
Chr2	stalkie_big_nohaplotig	exon	116809920	116810098	100	+	.	Parent=FBgn0003339.1.mrna1;Target=FBgn0003339.1 902 1080 +
Chr2	stalkie_big_nohaplotig	CDS	116738047	116738947	.	+	0	Parent=FBgn0003339.1.mrna1;Target=FBgn0003339.1 1 901 +
Chr2	stalkie_big_nohaplotig	CDS	116809920	116810098	.	+	2	Parent=FBgn0003339.1.mrna1;Target=FBgn0003339.1 902 1080 +
Chr2	gffcl	locus	116762037	116762552	.	+	.	ID=RLOC_00020929;geneIDs=comp149361_c0_seq1.path1;transcripts=comp149361_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116762037	116762552	.	+	.	ID=comp149361_c0_seq1.mrna1;geneID=comp149361_c0_seq1.path1;Name=comp149361_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=513;mismatches=3;indels=0;unknowns=0;Target=comp149361_c0_seq1 516 1 .;CDS_Target=comp149361_c0_seq1 514 299 .;locus=RLOC_00020929
Chr2	stalkie_big_nohaplotig	exon	116762037	116762552	99	+	.	Parent=comp149361_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	116762335	116762550	.	+	0	Parent=comp149361_c0_seq1.mrna1
Chr2	gffcl	locus	116764229	116764476	.	-	.	ID=RLOC_00020930;geneIDs=FBgn0260642.1.path2;transcripts=FBgn0260642.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	116764229	116764476	.	-	.	ID=FBgn0260642.1.mrna2;geneID=FBgn0260642.1.path2;Name=FBgn0260642.1;Dir=indeterminatecoverage=22.0;identity=100.0;matches=248;mismatches=0;indels=0;unknowns=0;Target=FBgn0260642.1 1128 881 .;locus=RLOC_00020930
Chr2	stalkie_big_nohaplotig	exon	116764229	116764476	100	-	.	Parent=FBgn0260642.1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	116764229	116764476	.	-	1	Parent=FBgn0260642.1.mrna2
Chr2	gffcl	locus	116810536	116812170	.	+	.	ID=RLOC_00020931;geneIDs=comp160088_c0_seq1.path1;transcripts=comp160088_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116810536	116812170	.	+	.	ID=comp160088_c0_seq1.mrna1;geneID=comp160088_c0_seq1.path1;Name=comp160088_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1629;mismatches=5;indels=1;unknowns=0;Target=comp160088_c0_seq1 1634 1 .;CDS_Target=comp160088_c0_seq1 145 2 .;locus=RLOC_00020931
Chr2	stalkie_big_nohaplotig	exon	116810536	116812170	99	+	.	Parent=comp160088_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	116810537	116810680	.	+	0	Parent=comp160088_c0_seq1.mrna1
Chr2	gffcl	locus	116812252	116813037	.	+	.	ID=RLOC_00020932;geneIDs=comp115323_c0_seq1.path1;transcripts=comp115323_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116812252	116813037	.	+	.	ID=comp115323_c0_seq1.mrna1;geneID=comp115323_c0_seq1.path1;Name=comp115323_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.9;matches=785;mismatches=1;indels=0;unknowns=0;Target=comp115323_c0_seq1 790 5 .;CDS_Target=comp115323_c0_seq1 599 519 .;locus=RLOC_00020932
Chr2	stalkie_big_nohaplotig	exon	116812252	116813037	99	+	.	Parent=comp115323_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	116812766	116812846	.	+	0	Parent=comp115323_c0_seq1.mrna1
Chr2	gffcl	locus	116830095	116830524	.	-	.	ID=RLOC_00020934;geneIDs=comp163656_c0_seq1.path1;transcripts=comp163656_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116830095	116830524	.	-	.	ID=comp163656_c0_seq1.mrna1;geneID=comp163656_c0_seq1.path1;Name=comp163656_c0_seq1;Dir=sensecoverage=39.4;identity=100.0;matches=364;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020934
Chr2	stalkie_big_nohaplotig	exon	116830095	116830148	100	-	.	Parent=comp163656_c0_seq1.mrna1;Target=comp163656_c0_seq1 311 364 +
Chr2	stalkie_big_nohaplotig	exon	116830215	116830524	100	-	.	Parent=comp163656_c0_seq1.mrna1;Target=comp163656_c0_seq1 1 310 +
Chr2	stalkie_big_nohaplotig	CDS	116830095	116830148	.	-	2	Parent=comp163656_c0_seq1.mrna1;Target=comp163656_c0_seq1 311 364 +
Chr2	stalkie_big_nohaplotig	CDS	116830215	116830437	.	-	0	Parent=comp163656_c0_seq1.mrna1;Target=comp163656_c0_seq1 88 310 +
Chr2	gffcl	locus	116880964	118243678	.	+	.	ID=RLOC_00020935;geneIDs=comp117744_c0_seq1.path1;transcripts=comp117744_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116880964	118243678	.	+	.	ID=comp117744_c0_seq1.mrna1;geneID=comp117744_c0_seq1.path1;Name=comp117744_c0_seq1;Dir=indeterminatecoverage=59.6;identity=99.8;matches=960;mismatches=2;indels=0;unknowns=0;Target=comp117744_c0_seq1 686 570 .;locus=RLOC_00020935
Chr2	stalkie_big_nohaplotig	exon	116880964	116881862	99	+	.	Parent=comp117744_c0_seq1.mrna1;Target=comp117744_c0_seq1 899 1 .
Chr2	stalkie_big_nohaplotig	exon	118189872	118189880	100	+	.	Parent=comp117744_c0_seq1.mrna1;Target=comp117744_c0_seq1 909 901 .
Chr2	stalkie_big_nohaplotig	exon	118189883	118189884	100	+	.	Parent=comp117744_c0_seq1.mrna1;Target=comp117744_c0_seq1 940 939 .
Chr2	stalkie_big_nohaplotig	exon	118226725	118226734	100	+	.	Parent=comp117744_c0_seq1.mrna1;Target=comp117744_c0_seq1 950 941 .
Chr2	stalkie_big_nohaplotig	exon	118234740	118234743	100	+	.	Parent=comp117744_c0_seq1.mrna1;Target=comp117744_c0_seq1 954 951 .
Chr2	stalkie_big_nohaplotig	exon	118235009	118235019	100	+	.	Parent=comp117744_c0_seq1.mrna1;Target=comp117744_c0_seq1 965 955 .
Chr2	stalkie_big_nohaplotig	exon	118235038	118235039	100	+	.	Parent=comp117744_c0_seq1.mrna1;Target=comp117744_c0_seq1 993 992 .
Chr2	stalkie_big_nohaplotig	exon	118238275	118238283	100	+	.	Parent=comp117744_c0_seq1.mrna1;Target=comp117744_c0_seq1 1002 994 .
Chr2	stalkie_big_nohaplotig	exon	118243660	118243667	100	+	.	Parent=comp117744_c0_seq1.mrna1;Target=comp117744_c0_seq1 1014 1007 .
Chr2	stalkie_big_nohaplotig	exon	118243671	118243678	100	+	.	Parent=comp117744_c0_seq1.mrna1;Target=comp117744_c0_seq1 1041 1034 .
Chr2	stalkie_big_nohaplotig	CDS	116881533	116881649	.	+	0	Parent=comp117744_c0_seq1.mrna1
Chr2	gffcl	locus	116885491	117066714	.	+	.	ID=RLOC_00020936;geneIDs=comp145567_c0_seq1.path1;transcripts=comp145567_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116885491	117066714	.	+	.	ID=comp145567_c0_seq1.mrna1;geneID=comp145567_c0_seq1.path1;Name=comp145567_c0_seq1;Dir=antisensecoverage=99.9;identity=98.3;matches=765;mismatches=5;indels=8;unknowns=0;Target=comp145567_c0_seq1 623 679 .;locus=RLOC_00020936
Chr2	stalkie_big_nohaplotig	exon	116885491	116885880	99	+	.	Parent=comp145567_c0_seq1.mrna1;Target=comp145567_c0_seq1 382 772 -
Chr2	stalkie_big_nohaplotig	exon	116947547	116947605	100	+	.	Parent=comp145567_c0_seq1.mrna1;Target=comp145567_c0_seq1 323 381 -
Chr2	stalkie_big_nohaplotig	exon	117066308	117066573	96	+	.	Parent=comp145567_c0_seq1.mrna1;Target=comp145567_c0_seq1 64 322 -
Chr2	stalkie_big_nohaplotig	exon	117066653	117066714	96	+	.	Parent=comp145567_c0_seq1.mrna1;Target=comp145567_c0_seq1 2 63 -
Chr2	stalkie_big_nohaplotig	CDS	116885584	116885640	.	+	0	Parent=comp145567_c0_seq1.mrna1
Chr2	gffcl	locus	116916860	118836349	.	-	.	ID=RLOC_00020937;geneIDs=comp162516_c2_seq1.path1;transcripts=comp162516_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116916860	118836349	.	-	.	ID=comp162516_c2_seq1.mrna1;geneID=comp162516_c2_seq1.path1;Name=comp162516_c2_seq1;Dir=indeterminatecoverage=57.9;identity=98.2;matches=810;mismatches=12;indels=3;unknowns=0;Target=comp162516_c2_seq1 556 470 .;locus=RLOC_00020937
Chr2	stalkie_big_nohaplotig	exon	116916860	116916866	100	-	.	Parent=comp162516_c2_seq1.mrna1;Target=comp162516_c2_seq1 824 818 .
Chr2	stalkie_big_nohaplotig	exon	116917852	116917868	70	-	.	Parent=comp162516_c2_seq1.mrna1;Target=comp162516_c2_seq1 817 801 .
Chr2	stalkie_big_nohaplotig	exon	116918068	116918080	84	-	.	Parent=comp162516_c2_seq1.mrna1;Target=comp162516_c2_seq1 800 788 .
Chr2	stalkie_big_nohaplotig	exon	116924972	116924973	100	-	.	Parent=comp162516_c2_seq1.mrna1;Target=comp162516_c2_seq1 787 786 .
Chr2	stalkie_big_nohaplotig	exon	116930953	116930961	100	-	.	Parent=comp162516_c2_seq1.mrna1;Target=comp162516_c2_seq1 785 777 .
Chr2	stalkie_big_nohaplotig	exon	118835575	118836349	98	-	.	Parent=comp162516_c2_seq1.mrna1;Target=comp162516_c2_seq1 776 1 .
Chr2	stalkie_big_nohaplotig	CDS	118835796	118835880	.	-	0	Parent=comp162516_c2_seq1.mrna1
Chr2	gffcl	locus	116962778	116963597	.	-	.	ID=RLOC_00020938;geneIDs=comp144682_c2_seq1.path1;transcripts=comp144682_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	116962778	116963597	.	-	.	ID=comp144682_c2_seq1.mrna1;geneID=comp144682_c2_seq1.path1;Name=comp144682_c2_seq1;Dir=indeterminatecoverage=99.6;identity=99.3;matches=814;mismatches=6;indels=0;unknowns=0;Target=comp144682_c2_seq1 823 4 .;CDS_Target=comp144682_c2_seq1 693 526 .;locus=RLOC_00020938
Chr2	stalkie_big_nohaplotig	exon	116962778	116963597	99	-	.	Parent=comp144682_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	116962908	116963075	.	-	0	Parent=comp144682_c2_seq1.mrna1
Chr2	gffcl	locus	117022947	117023169	.	+	.	ID=RLOC_00020939;geneIDs=comp158629_c0_seq1.path2;transcripts=comp158629_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	117022947	117023169	.	+	.	ID=comp158629_c0_seq1.mrna2;geneID=comp158629_c0_seq1.path2;Name=comp158629_c0_seq1;Dir=indeterminatecoverage=20.3;identity=91.5;matches=204;mismatches=19;indels=0;unknowns=0;Target=comp158629_c0_seq1 1031 809 .;locus=RLOC_00020939
Chr2	stalkie_big_nohaplotig	exon	117022947	117023169	91	+	.	Parent=comp158629_c0_seq1.mrna2
Chr2	gffcl	locus	117066836	117068265	.	+	.	ID=RLOC_00020940;geneIDs=FBgn0260642.1.path1;transcripts=FBgn0260642.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	117066836	117068265	.	+	.	ID=FBgn0260642.1.mrna1;geneID=FBgn0260642.1.path1;Name=FBgn0260642.1;Dir=sensecoverage=78.0;identity=100.0;matches=880;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020940
Chr2	stalkie_big_nohaplotig	exon	117066836	117067459	100	+	.	Parent=FBgn0260642.1.mrna1;Target=FBgn0260642.1 1 624 +
Chr2	stalkie_big_nohaplotig	exon	117067782	117067820	100	+	.	Parent=FBgn0260642.1.mrna1;Target=FBgn0260642.1 625 663 +
Chr2	stalkie_big_nohaplotig	exon	117068049	117068265	100	+	.	Parent=FBgn0260642.1.mrna1;Target=FBgn0260642.1 664 880 +
Chr2	stalkie_big_nohaplotig	CDS	117066836	117067459	.	+	0	Parent=FBgn0260642.1.mrna1;Target=FBgn0260642.1 1 624 +
Chr2	stalkie_big_nohaplotig	CDS	117067782	117067820	.	+	0	Parent=FBgn0260642.1.mrna1;Target=FBgn0260642.1 625 663 +
Chr2	stalkie_big_nohaplotig	CDS	117068049	117068265	.	+	0	Parent=FBgn0260642.1.mrna1;Target=FBgn0260642.1 664 880 +
Chr2	gffcl	locus	117067213	118890780	.	-	.	ID=RLOC_00020941;geneIDs=comp148605_c0_seq1.path1;transcripts=comp148605_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	117067213	118890780	.	-	.	ID=comp148605_c0_seq1.mrna1;geneID=comp148605_c0_seq1.path1;Name=comp148605_c0_seq1;Dir=indeterminatecoverage=98.9;identity=95.9;matches=540;mismatches=9;indels=14;unknowns=0;Target=comp148605_c0_seq1 266 3 .;locus=RLOC_00020941
Chr2	stalkie_big_nohaplotig	exon	117067213	117067228	100	-	.	Parent=comp148605_c0_seq1.mrna1;Target=comp148605_c0_seq1 616 601 .
Chr2	stalkie_big_nohaplotig	exon	117068060	117068065	100	-	.	Parent=comp148605_c0_seq1.mrna1;Target=comp148605_c0_seq1 600 595 .
Chr2	stalkie_big_nohaplotig	exon	117068187	117068191	100	-	.	Parent=comp148605_c0_seq1.mrna1;Target=comp148605_c0_seq1 594 590 .
Chr2	stalkie_big_nohaplotig	exon	117074840	117074853	85	-	.	Parent=comp148605_c0_seq1.mrna1;Target=comp148605_c0_seq1 589 578 .
Chr2	stalkie_big_nohaplotig	exon	117078916	117078926	100	-	.	Parent=comp148605_c0_seq1.mrna1;Target=comp148605_c0_seq1 577 567 .
Chr2	stalkie_big_nohaplotig	exon	117089581	117089585	100	-	.	Parent=comp148605_c0_seq1.mrna1;Target=comp148605_c0_seq1 566 562 .
Chr2	stalkie_big_nohaplotig	exon	117089614	117089621	100	-	.	Parent=comp148605_c0_seq1.mrna1;Target=comp148605_c0_seq1 506 499 .
Chr2	stalkie_big_nohaplotig	exon	117093102	117093103	100	-	.	Parent=comp148605_c0_seq1.mrna1;Target=comp148605_c0_seq1 498 497 .
Chr2	stalkie_big_nohaplotig	exon	117100999	117101010	83	-	.	Parent=comp148605_c0_seq1.mrna1;Target=comp148605_c0_seq1 496 485 .
Chr2	stalkie_big_nohaplotig	exon	117104137	117104150	85	-	.	Parent=comp148605_c0_seq1.mrna1;Target=comp148605_c0_seq1 484 471 .
Chr2	stalkie_big_nohaplotig	exon	117104646	117104649	100	-	.	Parent=comp148605_c0_seq1.mrna1;Target=comp148605_c0_seq1 470 467 .
Chr2	stalkie_big_nohaplotig	exon	117105344	117105349	100	-	.	Parent=comp148605_c0_seq1.mrna1;Target=comp148605_c0_seq1 466 461 .
Chr2	stalkie_big_nohaplotig	exon	117119357	117119363	100	-	.	Parent=comp148605_c0_seq1.mrna1;Target=comp148605_c0_seq1 460 454 .
Chr2	stalkie_big_nohaplotig	exon	117127324	117127328	100	-	.	Parent=comp148605_c0_seq1.mrna1;Target=comp148605_c0_seq1 453 449 .
Chr2	stalkie_big_nohaplotig	exon	117129651	117129655	100	-	.	Parent=comp148605_c0_seq1.mrna1;Target=comp148605_c0_seq1 448 444 .
Chr2	stalkie_big_nohaplotig	exon	117133963	117133964	100	-	.	Parent=comp148605_c0_seq1.mrna1;Target=comp148605_c0_seq1 443 442 .
Chr2	stalkie_big_nohaplotig	exon	117146179	117146181	100	-	.	Parent=comp148605_c0_seq1.mrna1;Target=comp148605_c0_seq1 441 439 .
Chr2	stalkie_big_nohaplotig	exon	117148086	117148088	100	-	.	Parent=comp148605_c0_seq1.mrna1;Target=comp148605_c0_seq1 438 436 .
Chr2	stalkie_big_nohaplotig	exon	117151509	117151516	100	-	.	Parent=comp148605_c0_seq1.mrna1;Target=comp148605_c0_seq1 435 428 .
Chr2	stalkie_big_nohaplotig	exon	117158122	117158125	100	-	.	Parent=comp148605_c0_seq1.mrna1;Target=comp148605_c0_seq1 427 424 .
Chr2	stalkie_big_nohaplotig	exon	117162160	117162163	100	-	.	Parent=comp148605_c0_seq1.mrna1;Target=comp148605_c0_seq1 423 420 .
Chr2	stalkie_big_nohaplotig	exon	118890374	118890780	95	-	.	Parent=comp148605_c0_seq1.mrna1;Target=comp148605_c0_seq1 419 1 .
Chr2	stalkie_big_nohaplotig	CDS	118890515	118890778	.	-	0	Parent=comp148605_c0_seq1.mrna1
Chr2	gffcl	locus	117143132	117143870	.	+	.	ID=RLOC_00020942;geneIDs=comp151953_c0_seq1.path1;transcripts=comp151953_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	117143132	117143870	.	+	.	ID=comp151953_c0_seq1.mrna1;geneID=comp151953_c0_seq1.path1;Name=comp151953_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=623;mismatches=7;indels=0;unknowns=0;Target=comp151953_c0_seq1 524 628 .;locus=RLOC_00020942
Chr2	stalkie_big_nohaplotig	exon	117143132	117143472	98	+	.	Parent=comp151953_c0_seq1.mrna1;Target=comp151953_c0_seq1 290 630 -
Chr2	stalkie_big_nohaplotig	exon	117143582	117143870	98	+	.	Parent=comp151953_c0_seq1.mrna1;Target=comp151953_c0_seq1 1 289 -
Chr2	stalkie_big_nohaplotig	CDS	117143134	117143238	.	+	0	Parent=comp151953_c0_seq1.mrna1
Chr2	gffcl	locus	117199837	117201261	.	+	.	ID=RLOC_00020943;geneIDs=comp136829_c0_seq1.path1;transcripts=comp136829_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	117199837	117201261	.	+	.	ID=comp136829_c0_seq1.mrna1;geneID=comp136829_c0_seq1.path1;Name=comp136829_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1418;mismatches=7;indels=1;unknowns=0;Target=comp136829_c0_seq1 1426 1 .;CDS_Target=comp136829_c0_seq1 229 2 .;locus=RLOC_00020943
Chr2	stalkie_big_nohaplotig	exon	117199837	117201261	99	+	.	Parent=comp136829_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	117199838	117200065	.	+	0	Parent=comp136829_c0_seq1.mrna1
Chr2	gffcl	locus	117202517	117258604	.	+	.	ID=RLOC_00020944;geneIDs=FBgn0003944.1.path1;transcripts=FBgn0003944.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	117202517	117258604	.	+	.	ID=FBgn0003944.1.mrna1;geneID=FBgn0003944.1.path1;Name=FBgn0003944.1;Dir=sensecoverage=61.5;identity=100.0;matches=478;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020944
Chr2	stalkie_big_nohaplotig	exon	117202517	117202889	100	+	.	Parent=FBgn0003944.1.mrna1;Target=FBgn0003944.1 1 373 +
Chr2	stalkie_big_nohaplotig	exon	117230254	117230307	100	+	.	Parent=FBgn0003944.1.mrna1;Target=FBgn0003944.1 374 427 +
Chr2	stalkie_big_nohaplotig	exon	117258554	117258604	100	+	.	Parent=FBgn0003944.1.mrna1;Target=FBgn0003944.1 428 478 +
Chr2	stalkie_big_nohaplotig	CDS	117202517	117202889	.	+	0	Parent=FBgn0003944.1.mrna1;Target=FBgn0003944.1 1 373 +
Chr2	stalkie_big_nohaplotig	CDS	117230254	117230307	.	+	2	Parent=FBgn0003944.1.mrna1;Target=FBgn0003944.1 374 427 +
Chr2	stalkie_big_nohaplotig	CDS	117258554	117258604	.	+	2	Parent=FBgn0003944.1.mrna1;Target=FBgn0003944.1 428 478 +
Chr2	gffcl	locus	117428700	117434825	.	+	.	ID=RLOC_00020945;geneIDs=comp154330_c0_seq1.path1;transcripts=comp154330_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	117428700	117434825	.	+	.	ID=comp154330_c0_seq1.mrna1;geneID=comp154330_c0_seq1.path1;Name=comp154330_c0_seq1;Dir=sensecoverage=99.9;identity=99.9;matches=800;mismatches=1;indels=0;unknowns=0;Target=comp154330_c0_seq1 196 720 +;locus=RLOC_00020945
Chr2	stalkie_big_nohaplotig	exon	117428700	117428762	100	+	.	Parent=comp154330_c0_seq1.mrna1;Target=comp154330_c0_seq1 1 63 +
Chr2	stalkie_big_nohaplotig	exon	117434088	117434825	99	+	.	Parent=comp154330_c0_seq1.mrna1;Target=comp154330_c0_seq1 64 801 +
Chr2	stalkie_big_nohaplotig	CDS	117434220	117434744	.	+	0	Parent=comp154330_c0_seq1.mrna1
Chr2	gffcl	locus	117488614	117537790	.	+	.	ID=RLOC_00020946;geneIDs=FBgn0000014.1.path1,comp158050_c1_seq1.path1;transcripts=comp158050_c1_seq1.mrna1,FBgn0000014.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	117488614	117537790	.	+	.	ID=comp158050_c1_seq1.mrna1;geneID=comp158050_c1_seq1.path1;Name=comp158050_c1_seq1;Dir=sensecoverage=99.8;identity=100.0;matches=1874;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020946
Chr2	stalkie_big_nohaplotig	exon	117488614	117489327	100	+	.	Parent=comp158050_c1_seq1.mrna1;Target=comp158050_c1_seq1 4 717 +
Chr2	stalkie_big_nohaplotig	exon	117495856	117496564	100	+	.	Parent=comp158050_c1_seq1.mrna1;Target=comp158050_c1_seq1 718 1426 +
Chr2	stalkie_big_nohaplotig	exon	117498311	117498549	100	+	.	Parent=comp158050_c1_seq1.mrna1;Target=comp158050_c1_seq1 1427 1665 +
Chr2	stalkie_big_nohaplotig	exon	117510060	117510107	100	+	.	Parent=comp158050_c1_seq1.mrna1;Target=comp158050_c1_seq1 1666 1713 +
Chr2	stalkie_big_nohaplotig	exon	117537627	117537790	100	+	.	Parent=comp158050_c1_seq1.mrna1;Target=comp158050_c1_seq1 1714 1877 +
Chr2	stalkie_big_nohaplotig	CDS	117496476	117496564	.	+	0	Parent=comp158050_c1_seq1.mrna1;Target=comp158050_c1_seq1 1338 1426 +
Chr2	stalkie_big_nohaplotig	CDS	117498311	117498549	.	+	1	Parent=comp158050_c1_seq1.mrna1;Target=comp158050_c1_seq1 1427 1665 +
Chr2	stalkie_big_nohaplotig	CDS	117510060	117510107	.	+	2	Parent=comp158050_c1_seq1.mrna1;Target=comp158050_c1_seq1 1666 1713 +
Chr2	stalkie_big_nohaplotig	CDS	117537627	117537790	.	+	2	Parent=comp158050_c1_seq1.mrna1;Target=comp158050_c1_seq1 1714 1877 +
Chr2	stalkie_big_nohaplotig	mRNA	117495741	117537790	.	+	.	ID=FBgn0000014.1.mrna1;geneID=FBgn0000014.1.path1;Name=FBgn0000014.1;Dir=sensecoverage=100.0;identity=100.0;matches=1275;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020946
Chr2	stalkie_big_nohaplotig	exon	117495741	117496564	100	+	.	Parent=FBgn0000014.1.mrna1;Target=FBgn0000014.1 1 824 +
Chr2	stalkie_big_nohaplotig	exon	117498311	117498549	100	+	.	Parent=FBgn0000014.1.mrna1;Target=FBgn0000014.1 825 1063 +
Chr2	stalkie_big_nohaplotig	exon	117510060	117510107	100	+	.	Parent=FBgn0000014.1.mrna1;Target=FBgn0000014.1 1064 1111 +
Chr2	stalkie_big_nohaplotig	exon	117537627	117537790	100	+	.	Parent=FBgn0000014.1.mrna1;Target=FBgn0000014.1 1112 1275 +
Chr2	stalkie_big_nohaplotig	CDS	117495741	117496564	.	+	0	Parent=FBgn0000014.1.mrna1;Target=FBgn0000014.1 1 824 +
Chr2	stalkie_big_nohaplotig	CDS	117498311	117498549	.	+	1	Parent=FBgn0000014.1.mrna1;Target=FBgn0000014.1 825 1063 +
Chr2	stalkie_big_nohaplotig	CDS	117510060	117510107	.	+	2	Parent=FBgn0000014.1.mrna1;Target=FBgn0000014.1 1064 1111 +
Chr2	stalkie_big_nohaplotig	CDS	117537627	117537790	.	+	2	Parent=FBgn0000014.1.mrna1;Target=FBgn0000014.1 1112 1275 +
Chr2	gffcl	locus	117540584	117541450	.	-	.	ID=RLOC_00020947;geneIDs=comp149354_c0_seq1.path1;transcripts=comp149354_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	117540584	117541450	.	-	.	ID=comp149354_c0_seq1.mrna1;geneID=comp149354_c0_seq1.path1;Name=comp149354_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.7;matches=864;mismatches=3;indels=0;unknowns=0;Target=comp149354_c0_seq1 867 1 .;CDS_Target=comp149354_c0_seq1 766 656 .;locus=RLOC_00020947
Chr2	stalkie_big_nohaplotig	exon	117540584	117541450	99	-	.	Parent=comp149354_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	117540685	117540795	.	-	0	Parent=comp149354_c0_seq1.mrna1
Chr2	gffcl	locus	117561167	118826101	.	-	.	ID=RLOC_00020948;geneIDs=comp147405_c0_seq1.path1;transcripts=comp147405_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	117561167	118826101	.	-	.	ID=comp147405_c0_seq1.mrna1;geneID=comp147405_c0_seq1.path1;Name=comp147405_c0_seq1;Dir=indeterminatecoverage=76.8;identity=93.9;matches=294;mismatches=12;indels=7;unknowns=0;locus=RLOC_00020948
Chr2	stalkie_big_nohaplotig	exon	117561167	117561172	100	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 422 417 .
Chr2	stalkie_big_nohaplotig	exon	117563786	117563788	100	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 416 414 .
Chr2	stalkie_big_nohaplotig	exon	117565954	117565956	100	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 413 411 .
Chr2	stalkie_big_nohaplotig	exon	117573631	117573635	100	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 410 406 .
Chr2	stalkie_big_nohaplotig	exon	117579082	117579086	100	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 405 401 .
Chr2	stalkie_big_nohaplotig	exon	117580503	117580510	87	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 400 393 .
Chr2	stalkie_big_nohaplotig	exon	117584351	117584352	100	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 392 391 .
Chr2	stalkie_big_nohaplotig	exon	117585121	117585123	100	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 390 388 .
Chr2	stalkie_big_nohaplotig	exon	117586239	117586246	87	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 387 380 .
Chr2	stalkie_big_nohaplotig	exon	117589450	117589458	66	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 379 371 .
Chr2	stalkie_big_nohaplotig	exon	117592988	117593000	84	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 370 358 .
Chr2	stalkie_big_nohaplotig	exon	117593349	117593356	87	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 357 350 .
Chr2	stalkie_big_nohaplotig	exon	117593451	117593458	100	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 349 342 .
Chr2	stalkie_big_nohaplotig	exon	117593551	117593559	22	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 306 305 .
Chr2	stalkie_big_nohaplotig	exon	117598163	117598169	100	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 275 269 .
Chr2	stalkie_big_nohaplotig	exon	117629584	117629591	100	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 268 261 .
Chr2	stalkie_big_nohaplotig	exon	117633372	117633380	100	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 260 252 .
Chr2	stalkie_big_nohaplotig	exon	117634539	117634540	100	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 251 250 .
Chr2	stalkie_big_nohaplotig	exon	117634788	117634790	100	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 249 247 .
Chr2	stalkie_big_nohaplotig	exon	117634910	117634917	100	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 246 239 .
Chr2	stalkie_big_nohaplotig	exon	117641206	117641212	100	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 238 232 .
Chr2	stalkie_big_nohaplotig	exon	117642664	117642669	100	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 231 226 .
Chr2	stalkie_big_nohaplotig	exon	117644350	117644351	100	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 225 224 .
Chr2	stalkie_big_nohaplotig	exon	117649690	117649691	50	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 223 222 .
Chr2	stalkie_big_nohaplotig	exon	118825933	118826101	98	-	.	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 221 53 .
Chr2	stalkie_big_nohaplotig	CDS	117598163	117598169	.	-	1	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 275 269 .
Chr2	stalkie_big_nohaplotig	CDS	117629584	117629591	.	-	0	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 268 261 .
Chr2	stalkie_big_nohaplotig	CDS	117633372	117633380	.	-	0	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 260 252 .
Chr2	stalkie_big_nohaplotig	CDS	117634539	117634540	.	-	2	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 251 250 .
Chr2	stalkie_big_nohaplotig	CDS	117634788	117634790	.	-	2	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 249 247 .
Chr2	stalkie_big_nohaplotig	CDS	117634910	117634917	.	-	1	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 246 239 .
Chr2	stalkie_big_nohaplotig	CDS	117641206	117641212	.	-	2	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 238 232 .
Chr2	stalkie_big_nohaplotig	CDS	117642664	117642669	.	-	2	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 231 226 .
Chr2	stalkie_big_nohaplotig	CDS	117644350	117644351	.	-	1	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 225 224 .
Chr2	stalkie_big_nohaplotig	CDS	117649690	117649691	.	-	0	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 223 222 .
Chr2	stalkie_big_nohaplotig	CDS	118825933	118826013	.	-	0	Parent=comp147405_c0_seq1.mrna1;Target=comp147405_c0_seq1 221 141 .
Chr2	gffcl	locus	117683014	117683079	.	+	.	ID=RLOC_00020949;geneIDs=comp1653752_c0_seq1.path4;transcripts=comp1653752_c0_seq1.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	117683014	117683079	.	+	.	ID=comp1653752_c0_seq1.mrna4;geneID=comp1653752_c0_seq1.path4;Name=comp1653752_c0_seq1;Dir=indeterminatecoverage=31.6;identity=86.4;matches=57;mismatches=9;indels=0;unknowns=0;Target=comp1653752_c0_seq1 129 64 .;locus=RLOC_00020949
Chr2	stalkie_big_nohaplotig	exon	117683014	117683079	86	+	.	Parent=comp1653752_c0_seq1.mrna4
Chr2	stalkie_big_nohaplotig	CDS	117683014	117683079	.	+	0	Parent=comp1653752_c0_seq1.mrna4
Chr2	gffcl	locus	117727686	117730455	.	+	.	ID=RLOC_00020950;geneIDs=comp163032_c0_seq1.path2;transcripts=comp163032_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	117727686	117730455	.	+	.	ID=comp163032_c0_seq1.mrna2;geneID=comp163032_c0_seq1.path2;Name=comp163032_c0_seq1;Dir=indeterminatecoverage=80.3;identity=95.3;matches=2651;mismatches=82;indels=48;unknowns=0;Target=comp163032_c0_seq1 2124 1813 .;locus=RLOC_00020950
Chr2	stalkie_big_nohaplotig	exon	117727686	117728002	77	+	.	Parent=comp163032_c0_seq1.mrna2;Target=comp163032_c0_seq1 874 547 .
Chr2	stalkie_big_nohaplotig	exon	117728005	117730455	97	+	.	Parent=comp163032_c0_seq1.mrna2;Target=comp163032_c0_seq1 3305 888 .
Chr2	stalkie_big_nohaplotig	CDS	117728959	117729270	.	+	0	Parent=comp163032_c0_seq1.mrna2
Chr2	gffcl	locus	117795946	117806365	.	-	.	ID=RLOC_00020951;geneIDs=FBgn0000015.1.path1;transcripts=FBgn0000015.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	117795946	117806365	.	-	.	ID=FBgn0000015.1.mrna1;geneID=FBgn0000015.1.path1;Name=FBgn0000015.1;Dir=sensecoverage=100.0;identity=99.6;matches=914;mismatches=4;indels=0;unknowns=0;locus=RLOC_00020951
Chr2	stalkie_big_nohaplotig	exon	117795946	117796134	99	-	.	Parent=FBgn0000015.1.mrna1;Target=FBgn0000015.1 730 918 +
Chr2	stalkie_big_nohaplotig	exon	117796208	117796404	100	-	.	Parent=FBgn0000015.1.mrna1;Target=FBgn0000015.1 533 729 +
Chr2	stalkie_big_nohaplotig	exon	117799238	117799442	100	-	.	Parent=FBgn0000015.1.mrna1;Target=FBgn0000015.1 328 532 +
Chr2	stalkie_big_nohaplotig	exon	117799508	117799716	100	-	.	Parent=FBgn0000015.1.mrna1;Target=FBgn0000015.1 119 327 +
Chr2	stalkie_big_nohaplotig	exon	117806248	117806365	97	-	.	Parent=FBgn0000015.1.mrna1;Target=FBgn0000015.1 1 118 +
Chr2	stalkie_big_nohaplotig	CDS	117795946	117796134	.	-	0	Parent=FBgn0000015.1.mrna1;Target=FBgn0000015.1 730 918 +
Chr2	stalkie_big_nohaplotig	CDS	117796208	117796404	.	-	2	Parent=FBgn0000015.1.mrna1;Target=FBgn0000015.1 533 729 +
Chr2	stalkie_big_nohaplotig	CDS	117799238	117799442	.	-	0	Parent=FBgn0000015.1.mrna1;Target=FBgn0000015.1 328 532 +
Chr2	stalkie_big_nohaplotig	CDS	117799508	117799716	.	-	2	Parent=FBgn0000015.1.mrna1;Target=FBgn0000015.1 119 327 +
Chr2	stalkie_big_nohaplotig	CDS	117806248	117806365	.	-	0	Parent=FBgn0000015.1.mrna1;Target=FBgn0000015.1 1 118 +
Chr2	gffcl	locus	117876179	117881220	.	+	.	ID=RLOC_00020952;geneIDs=FBgn0086359.1.path1;transcripts=FBgn0086359.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	117876179	117881220	.	+	.	ID=FBgn0086359.1.mrna1;geneID=FBgn0086359.1.path1;Name=FBgn0086359.1;Dir=sensecoverage=87.9;identity=99.8;matches=1940;mismatches=3;indels=0;unknowns=0;locus=RLOC_00020952
Chr2	stalkie_big_nohaplotig	exon	117876179	117876335	98	+	.	Parent=FBgn0086359.1.mrna1;Target=FBgn0086359.1 269 425 +
Chr2	stalkie_big_nohaplotig	exon	117878445	117878475	100	+	.	Parent=FBgn0086359.1.mrna1;Target=FBgn0086359.1 426 456 +
Chr2	stalkie_big_nohaplotig	exon	117878556	117878638	100	+	.	Parent=FBgn0086359.1.mrna1;Target=FBgn0086359.1 457 539 +
Chr2	stalkie_big_nohaplotig	exon	117878729	117878840	100	+	.	Parent=FBgn0086359.1.mrna1;Target=FBgn0086359.1 540 651 +
Chr2	stalkie_big_nohaplotig	exon	117878935	117879320	100	+	.	Parent=FBgn0086359.1.mrna1;Target=FBgn0086359.1 652 1037 +
Chr2	stalkie_big_nohaplotig	exon	117879394	117879581	100	+	.	Parent=FBgn0086359.1.mrna1;Target=FBgn0086359.1 1038 1225 +
Chr2	stalkie_big_nohaplotig	exon	117879654	117879879	100	+	.	Parent=FBgn0086359.1.mrna1;Target=FBgn0086359.1 1226 1451 +
Chr2	stalkie_big_nohaplotig	exon	117880099	117880231	100	+	.	Parent=FBgn0086359.1.mrna1;Target=FBgn0086359.1 1452 1584 +
Chr2	stalkie_big_nohaplotig	exon	117880398	117880557	100	+	.	Parent=FBgn0086359.1.mrna1;Target=FBgn0086359.1 1585 1744 +
Chr2	stalkie_big_nohaplotig	exon	117880682	117880929	99	+	.	Parent=FBgn0086359.1.mrna1;Target=FBgn0086359.1 1745 1992 +
Chr2	stalkie_big_nohaplotig	exon	117881002	117881220	100	+	.	Parent=FBgn0086359.1.mrna1;Target=FBgn0086359.1 1993 2211 +
Chr2	stalkie_big_nohaplotig	CDS	117876181	117876335	.	+	0	Parent=FBgn0086359.1.mrna1;Target=FBgn0086359.1 271 425 +
Chr2	stalkie_big_nohaplotig	CDS	117878445	117878475	.	+	1	Parent=FBgn0086359.1.mrna1;Target=FBgn0086359.1 426 456 +
Chr2	stalkie_big_nohaplotig	CDS	117878556	117878638	.	+	0	Parent=FBgn0086359.1.mrna1;Target=FBgn0086359.1 457 539 +
Chr2	stalkie_big_nohaplotig	CDS	117878729	117878840	.	+	1	Parent=FBgn0086359.1.mrna1;Target=FBgn0086359.1 540 651 +
Chr2	stalkie_big_nohaplotig	CDS	117878935	117879320	.	+	0	Parent=FBgn0086359.1.mrna1;Target=FBgn0086359.1 652 1037 +
Chr2	stalkie_big_nohaplotig	CDS	117879394	117879581	.	+	1	Parent=FBgn0086359.1.mrna1;Target=FBgn0086359.1 1038 1225 +
Chr2	stalkie_big_nohaplotig	CDS	117879654	117879879	.	+	2	Parent=FBgn0086359.1.mrna1;Target=FBgn0086359.1 1226 1451 +
Chr2	stalkie_big_nohaplotig	CDS	117880099	117880231	.	+	1	Parent=FBgn0086359.1.mrna1;Target=FBgn0086359.1 1452 1584 +
Chr2	stalkie_big_nohaplotig	CDS	117880398	117880557	.	+	0	Parent=FBgn0086359.1.mrna1;Target=FBgn0086359.1 1585 1744 +
Chr2	stalkie_big_nohaplotig	CDS	117880682	117880929	.	+	2	Parent=FBgn0086359.1.mrna1;Target=FBgn0086359.1 1745 1992 +
Chr2	stalkie_big_nohaplotig	CDS	117881002	117881220	.	+	0	Parent=FBgn0086359.1.mrna1;Target=FBgn0086359.1 1993 2211 +
Chr2	gffcl	locus	117883349	117883701	.	+	.	ID=RLOC_00020953;geneIDs=comp160865_c0_seq1.path1;transcripts=comp160865_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	117883349	117883701	.	+	.	ID=comp160865_c0_seq1.mrna1;geneID=comp160865_c0_seq1.path1;Name=comp160865_c0_seq1;Dir=indeterminatecoverage=89.4;identity=98.9;matches=349;mismatches=4;indels=0;unknowns=0;Target=comp160865_c0_seq1 371 19 .;CDS_Target=comp160865_c0_seq1 209 21 .;locus=RLOC_00020953
Chr2	stalkie_big_nohaplotig	exon	117883349	117883701	98	+	.	Parent=comp160865_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	117883351	117883539	.	+	0	Parent=comp160865_c0_seq1.mrna1
Chr2	gffcl	locus	117887989	117901458	.	-	.	ID=RLOC_00020954;geneIDs=FBgn0004644.1.path2;transcripts=FBgn0004644.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	117887989	117901458	.	-	.	ID=FBgn0004644.1.mrna2;geneID=FBgn0004644.1.path2;Name=FBgn0004644.1;Dir=sensecoverage=63.4;identity=99.1;matches=942;mismatches=9;indels=0;unknowns=0;locus=RLOC_00020954
Chr2	stalkie_big_nohaplotig	exon	117887989	117888677	98	-	.	Parent=FBgn0004644.1.mrna2;Target=FBgn0004644.1 812 1500 +
Chr2	stalkie_big_nohaplotig	exon	117901197	117901458	99	-	.	Parent=FBgn0004644.1.mrna2;Target=FBgn0004644.1 550 811 +
Chr2	stalkie_big_nohaplotig	CDS	117887989	117888677	.	-	2	Parent=FBgn0004644.1.mrna2;Target=FBgn0004644.1 812 1500 +
Chr2	stalkie_big_nohaplotig	CDS	117901197	117901458	.	-	0	Parent=FBgn0004644.1.mrna2;Target=FBgn0004644.1 550 811 +
Chr2	gffcl	locus	118026475	118030768	.	-	.	ID=RLOC_00020955;geneIDs=FBgn0035371.1.path1;transcripts=FBgn0035371.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118026475	118030768	.	-	.	ID=FBgn0035371.1.mrna1;geneID=FBgn0035371.1.path1;Name=FBgn0035371.1;Dir=sensecoverage=99.9;identity=99.5;matches=1461;mismatches=7;indels=1;unknowns=0;locus=RLOC_00020955
Chr2	stalkie_big_nohaplotig	exon	118026475	118026598	99	-	.	Parent=FBgn0035371.1.mrna1;Target=FBgn0035371.1 1346 1469 +
Chr2	stalkie_big_nohaplotig	exon	118027770	118028016	99	-	.	Parent=FBgn0035371.1.mrna1;Target=FBgn0035371.1 1099 1345 +
Chr2	stalkie_big_nohaplotig	exon	118028078	118028243	100	-	.	Parent=FBgn0035371.1.mrna1;Target=FBgn0035371.1 933 1098 +
Chr2	stalkie_big_nohaplotig	exon	118028417	118028569	100	-	.	Parent=FBgn0035371.1.mrna1;Target=FBgn0035371.1 780 932 +
Chr2	stalkie_big_nohaplotig	exon	118028644	118028993	99	-	.	Parent=FBgn0035371.1.mrna1;Target=FBgn0035371.1 430 779 +
Chr2	stalkie_big_nohaplotig	exon	118029060	118029379	99	-	.	Parent=FBgn0035371.1.mrna1;Target=FBgn0035371.1 110 429 +
Chr2	stalkie_big_nohaplotig	exon	118030661	118030768	96	-	.	Parent=FBgn0035371.1.mrna1;Target=FBgn0035371.1 1 109 +
Chr2	stalkie_big_nohaplotig	CDS	118026477	118026598	.	-	2	Parent=FBgn0035371.1.mrna1;Target=FBgn0035371.1 1346 1467 +
Chr2	stalkie_big_nohaplotig	CDS	118027770	118028016	.	-	0	Parent=FBgn0035371.1.mrna1;Target=FBgn0035371.1 1099 1345 +
Chr2	stalkie_big_nohaplotig	CDS	118028078	118028243	.	-	1	Parent=FBgn0035371.1.mrna1;Target=FBgn0035371.1 933 1098 +
Chr2	stalkie_big_nohaplotig	CDS	118028417	118028569	.	-	1	Parent=FBgn0035371.1.mrna1;Target=FBgn0035371.1 780 932 +
Chr2	stalkie_big_nohaplotig	CDS	118028644	118028993	.	-	0	Parent=FBgn0035371.1.mrna1;Target=FBgn0035371.1 430 779 +
Chr2	stalkie_big_nohaplotig	CDS	118029060	118029379	.	-	2	Parent=FBgn0035371.1.mrna1;Target=FBgn0035371.1 110 429 +
Chr2	stalkie_big_nohaplotig	CDS	118030661	118030691	.	-	0	Parent=FBgn0035371.1.mrna1;Target=FBgn0035371.1 79 109 +
Chr2	gffcl	locus	118055253	118055643	.	-	.	ID=RLOC_00020956;geneIDs=comp150643_c0_seq1.path1;transcripts=comp150643_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118055253	118055643	.	-	.	ID=comp150643_c0_seq1.mrna1;geneID=comp150643_c0_seq1.path1;Name=comp150643_c0_seq1;Dir=indeterminatecoverage=97.8;identity=98.7;matches=387;mismatches=4;indels=1;unknowns=0;Target=comp150643_c0_seq1 401 10 .;CDS_Target=comp150643_c0_seq1 282 199 .;locus=RLOC_00020956
Chr2	stalkie_big_nohaplotig	exon	118055253	118055643	98	-	.	Parent=comp150643_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118055371	118055454	.	-	0	Parent=comp150643_c0_seq1.mrna1
Chr2	gffcl	locus	118056352	118056874	.	+	.	ID=RLOC_00020957;geneIDs=comp148000_c1_seq1.path1;transcripts=comp148000_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118056352	118056874	.	+	.	ID=comp148000_c1_seq1.mrna1;geneID=comp148000_c1_seq1.path1;Name=comp148000_c1_seq1;Dir=indeterminatecoverage=97.8;identity=99.8;matches=522;mismatches=1;indels=0;unknowns=0;Target=comp148000_c1_seq1 523 1 .;CDS_Target=comp148000_c1_seq1 380 300 .;locus=RLOC_00020957
Chr2	stalkie_big_nohaplotig	exon	118056352	118056874	99	+	.	Parent=comp148000_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118056651	118056731	.	+	0	Parent=comp148000_c1_seq1.mrna1
Chr2	gffcl	locus	118057121	118060844	.	-	.	ID=RLOC_00020958;geneIDs=FBgn0038460.1.path1;transcripts=FBgn0038460.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118057121	118060844	.	-	.	ID=FBgn0038460.1.mrna1;geneID=FBgn0038460.1.path1;Name=FBgn0038460.1;Dir=sensecoverage=100.0;identity=99.3;matches=295;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020958
Chr2	stalkie_big_nohaplotig	exon	118057121	118057398	99	-	.	Parent=FBgn0038460.1.mrna1;Target=FBgn0038460.1 20 297 +
Chr2	stalkie_big_nohaplotig	exon	118060826	118060844	100	-	.	Parent=FBgn0038460.1.mrna1;Target=FBgn0038460.1 1 19 +
Chr2	stalkie_big_nohaplotig	CDS	118057121	118057398	.	-	2	Parent=FBgn0038460.1.mrna1;Target=FBgn0038460.1 20 297 +
Chr2	stalkie_big_nohaplotig	CDS	118060826	118060844	.	-	0	Parent=FBgn0038460.1.mrna1;Target=FBgn0038460.1 1 19 +
Chr2	gffcl	locus	118084743	118088180	.	+	.	ID=RLOC_00020959;geneIDs=FBgn0051274.1.path1;transcripts=FBgn0051274.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118084743	118088180	.	+	.	ID=FBgn0051274.1.mrna1;geneID=FBgn0051274.1.path1;Name=FBgn0051274.1;Dir=sensecoverage=100.0;identity=98.5;matches=999;mismatches=0;indels=15;unknowns=0;locus=RLOC_00020959
Chr2	stalkie_big_nohaplotig	exon	118084743	118084843	100	+	.	Parent=FBgn0051274.1.mrna1;Target=FBgn0051274.1 1 101 +
Chr2	stalkie_big_nohaplotig	exon	118087224	118087655	100	+	.	Parent=FBgn0051274.1.mrna1;Target=FBgn0051274.1 102 533 +
Chr2	stalkie_big_nohaplotig	exon	118087715	118088180	96	+	.	Parent=FBgn0051274.1.mrna1;Target=FBgn0051274.1 534 1014 +
Chr2	stalkie_big_nohaplotig	CDS	118084743	118084843	.	+	0	Parent=FBgn0051274.1.mrna1;Target=FBgn0051274.1 1 101 +
Chr2	stalkie_big_nohaplotig	CDS	118087224	118087655	.	+	1	Parent=FBgn0051274.1.mrna1;Target=FBgn0051274.1 102 533 +
Chr2	stalkie_big_nohaplotig	CDS	118087715	118088180	.	+	1	Parent=FBgn0051274.1.mrna1;Target=FBgn0051274.1 534 1014 +
Chr2	gffcl	locus	118089437	118090851	.	-	.	ID=RLOC_00020960;geneIDs=FBgn0038462.1.path1;transcripts=FBgn0038462.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118089437	118090851	.	-	.	ID=FBgn0038462.1.mrna1;geneID=FBgn0038462.1.path1;Name=FBgn0038462.1;Dir=sensecoverage=100.0;identity=99.9;matches=863;mismatches=0;indels=1;unknowns=0;locus=RLOC_00020960
Chr2	stalkie_big_nohaplotig	exon	118089437	118089534	98	-	.	Parent=FBgn0038462.1.mrna1;Target=FBgn0038462.1 766 864 +
Chr2	stalkie_big_nohaplotig	exon	118089608	118089703	100	-	.	Parent=FBgn0038462.1.mrna1;Target=FBgn0038462.1 670 765 +
Chr2	stalkie_big_nohaplotig	exon	118089760	118089916	100	-	.	Parent=FBgn0038462.1.mrna1;Target=FBgn0038462.1 513 669 +
Chr2	stalkie_big_nohaplotig	exon	118090211	118090619	100	-	.	Parent=FBgn0038462.1.mrna1;Target=FBgn0038462.1 104 512 +
Chr2	stalkie_big_nohaplotig	exon	118090749	118090851	100	-	.	Parent=FBgn0038462.1.mrna1;Target=FBgn0038462.1 1 103 +
Chr2	stalkie_big_nohaplotig	CDS	118089437	118089534	.	-	0	Parent=FBgn0038462.1.mrna1;Target=FBgn0038462.1 766 864 +
Chr2	stalkie_big_nohaplotig	CDS	118089608	118089703	.	-	0	Parent=FBgn0038462.1.mrna1;Target=FBgn0038462.1 670 765 +
Chr2	stalkie_big_nohaplotig	CDS	118089760	118089916	.	-	1	Parent=FBgn0038462.1.mrna1;Target=FBgn0038462.1 513 669 +
Chr2	stalkie_big_nohaplotig	CDS	118090211	118090619	.	-	2	Parent=FBgn0038462.1.mrna1;Target=FBgn0038462.1 104 512 +
Chr2	stalkie_big_nohaplotig	CDS	118090749	118090851	.	-	0	Parent=FBgn0038462.1.mrna1;Target=FBgn0038462.1 1 103 +
Chr2	gffcl	locus	118092506	118095243	.	+	.	ID=RLOC_00020961;geneIDs=FBgn0024332.1.path1;transcripts=FBgn0024332.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118092506	118095243	.	+	.	ID=FBgn0024332.1.mrna1;geneID=FBgn0024332.1.path1;Name=FBgn0024332.1;Dir=sensecoverage=100.0;identity=100.0;matches=2475;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020961
Chr2	stalkie_big_nohaplotig	exon	118092506	118092855	100	+	.	Parent=FBgn0024332.1.mrna1;Target=FBgn0024332.1 1 350 +
Chr2	stalkie_big_nohaplotig	exon	118092916	118093927	100	+	.	Parent=FBgn0024332.1.mrna1;Target=FBgn0024332.1 351 1362 +
Chr2	stalkie_big_nohaplotig	exon	118093988	118094136	100	+	.	Parent=FBgn0024332.1.mrna1;Target=FBgn0024332.1 1363 1511 +
Chr2	stalkie_big_nohaplotig	exon	118094222	118094306	100	+	.	Parent=FBgn0024332.1.mrna1;Target=FBgn0024332.1 1512 1596 +
Chr2	stalkie_big_nohaplotig	exon	118094365	118095243	100	+	.	Parent=FBgn0024332.1.mrna1;Target=FBgn0024332.1 1597 2475 +
Chr2	stalkie_big_nohaplotig	CDS	118092506	118092855	.	+	0	Parent=FBgn0024332.1.mrna1;Target=FBgn0024332.1 1 350 +
Chr2	stalkie_big_nohaplotig	CDS	118092916	118093927	.	+	1	Parent=FBgn0024332.1.mrna1;Target=FBgn0024332.1 351 1362 +
Chr2	stalkie_big_nohaplotig	CDS	118093988	118094136	.	+	0	Parent=FBgn0024332.1.mrna1;Target=FBgn0024332.1 1363 1511 +
Chr2	stalkie_big_nohaplotig	CDS	118094222	118094306	.	+	1	Parent=FBgn0024332.1.mrna1;Target=FBgn0024332.1 1512 1596 +
Chr2	stalkie_big_nohaplotig	CDS	118094365	118095243	.	+	0	Parent=FBgn0024332.1.mrna1;Target=FBgn0024332.1 1597 2475 +
Chr2	gffcl	locus	118096423	118098938	.	-	.	ID=RLOC_00020962;geneIDs=FBgn0038469.1.path1;transcripts=FBgn0038469.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118096423	118098938	.	-	.	ID=FBgn0038469.1.mrna1;geneID=FBgn0038469.1.path1;Name=FBgn0038469.1;Dir=sensecoverage=100.0;identity=100.0;matches=1998;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020962
Chr2	stalkie_big_nohaplotig	exon	118096423	118096504	100	-	.	Parent=FBgn0038469.1.mrna1;Target=FBgn0038469.1 1917 1998 +
Chr2	stalkie_big_nohaplotig	exon	118096564	118096669	100	-	.	Parent=FBgn0038469.1.mrna1;Target=FBgn0038469.1 1811 1916 +
Chr2	stalkie_big_nohaplotig	exon	118096733	118096931	100	-	.	Parent=FBgn0038469.1.mrna1;Target=FBgn0038469.1 1612 1810 +
Chr2	stalkie_big_nohaplotig	exon	118096993	118097166	100	-	.	Parent=FBgn0038469.1.mrna1;Target=FBgn0038469.1 1438 1611 +
Chr2	stalkie_big_nohaplotig	exon	118097256	118097421	100	-	.	Parent=FBgn0038469.1.mrna1;Target=FBgn0038469.1 1272 1437 +
Chr2	stalkie_big_nohaplotig	exon	118097482	118098181	100	-	.	Parent=FBgn0038469.1.mrna1;Target=FBgn0038469.1 572 1271 +
Chr2	stalkie_big_nohaplotig	exon	118098241	118098452	100	-	.	Parent=FBgn0038469.1.mrna1;Target=FBgn0038469.1 360 571 +
Chr2	stalkie_big_nohaplotig	exon	118098518	118098748	100	-	.	Parent=FBgn0038469.1.mrna1;Target=FBgn0038469.1 129 359 +
Chr2	stalkie_big_nohaplotig	exon	118098811	118098938	100	-	.	Parent=FBgn0038469.1.mrna1;Target=FBgn0038469.1 1 128 +
Chr2	stalkie_big_nohaplotig	CDS	118096423	118096504	.	-	1	Parent=FBgn0038469.1.mrna1;Target=FBgn0038469.1 1917 1998 +
Chr2	stalkie_big_nohaplotig	CDS	118096564	118096669	.	-	2	Parent=FBgn0038469.1.mrna1;Target=FBgn0038469.1 1811 1916 +
Chr2	stalkie_big_nohaplotig	CDS	118096733	118096931	.	-	0	Parent=FBgn0038469.1.mrna1;Target=FBgn0038469.1 1612 1810 +
Chr2	stalkie_big_nohaplotig	CDS	118096993	118097166	.	-	0	Parent=FBgn0038469.1.mrna1;Target=FBgn0038469.1 1438 1611 +
Chr2	stalkie_big_nohaplotig	CDS	118097256	118097421	.	-	1	Parent=FBgn0038469.1.mrna1;Target=FBgn0038469.1 1272 1437 +
Chr2	stalkie_big_nohaplotig	CDS	118097482	118098181	.	-	2	Parent=FBgn0038469.1.mrna1;Target=FBgn0038469.1 572 1271 +
Chr2	stalkie_big_nohaplotig	CDS	118098241	118098452	.	-	1	Parent=FBgn0038469.1.mrna1;Target=FBgn0038469.1 360 571 +
Chr2	stalkie_big_nohaplotig	CDS	118098518	118098748	.	-	1	Parent=FBgn0038469.1.mrna1;Target=FBgn0038469.1 129 359 +
Chr2	stalkie_big_nohaplotig	CDS	118098811	118098938	.	-	0	Parent=FBgn0038469.1.mrna1;Target=FBgn0038469.1 1 128 +
Chr2	gffcl	locus	118103084	118107240	.	-	.	ID=RLOC_00020963;geneIDs=FBgn0004577.1.path1;transcripts=FBgn0004577.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118103084	118107240	.	-	.	ID=FBgn0004577.1.mrna1;geneID=FBgn0004577.1.path1;Name=FBgn0004577.1;Dir=sensecoverage=97.6;identity=99.7;matches=2037;mismatches=6;indels=0;unknowns=0;locus=RLOC_00020963
Chr2	stalkie_big_nohaplotig	exon	118103084	118103177	100	-	.	Parent=FBgn0004577.1.mrna1;Target=FBgn0004577.1 2001 2094 +
Chr2	stalkie_big_nohaplotig	exon	118103431	118103536	100	-	.	Parent=FBgn0004577.1.mrna1;Target=FBgn0004577.1 1895 2000 +
Chr2	stalkie_big_nohaplotig	exon	118103620	118103818	99	-	.	Parent=FBgn0004577.1.mrna1;Target=FBgn0004577.1 1696 1894 +
Chr2	stalkie_big_nohaplotig	exon	118103934	118104104	100	-	.	Parent=FBgn0004577.1.mrna1;Target=FBgn0004577.1 1525 1695 +
Chr2	stalkie_big_nohaplotig	exon	118104184	118104340	100	-	.	Parent=FBgn0004577.1.mrna1;Target=FBgn0004577.1 1368 1524 +
Chr2	stalkie_big_nohaplotig	exon	118104414	118105158	99	-	.	Parent=FBgn0004577.1.mrna1;Target=FBgn0004577.1 623 1367 +
Chr2	stalkie_big_nohaplotig	exon	118105303	118105514	100	-	.	Parent=FBgn0004577.1.mrna1;Target=FBgn0004577.1 411 622 +
Chr2	stalkie_big_nohaplotig	exon	118106882	118107240	99	-	.	Parent=FBgn0004577.1.mrna1;Target=FBgn0004577.1 52 410 +
Chr2	stalkie_big_nohaplotig	CDS	118103084	118103177	.	-	1	Parent=FBgn0004577.1.mrna1;Target=FBgn0004577.1 2001 2094 +
Chr2	stalkie_big_nohaplotig	CDS	118103431	118103536	.	-	2	Parent=FBgn0004577.1.mrna1;Target=FBgn0004577.1 1895 2000 +
Chr2	stalkie_big_nohaplotig	CDS	118103620	118103818	.	-	0	Parent=FBgn0004577.1.mrna1;Target=FBgn0004577.1 1696 1894 +
Chr2	stalkie_big_nohaplotig	CDS	118103934	118104104	.	-	0	Parent=FBgn0004577.1.mrna1;Target=FBgn0004577.1 1525 1695 +
Chr2	stalkie_big_nohaplotig	CDS	118104184	118104340	.	-	1	Parent=FBgn0004577.1.mrna1;Target=FBgn0004577.1 1368 1524 +
Chr2	stalkie_big_nohaplotig	CDS	118104414	118105158	.	-	2	Parent=FBgn0004577.1.mrna1;Target=FBgn0004577.1 623 1367 +
Chr2	stalkie_big_nohaplotig	CDS	118105303	118105514	.	-	1	Parent=FBgn0004577.1.mrna1;Target=FBgn0004577.1 411 622 +
Chr2	stalkie_big_nohaplotig	CDS	118106882	118107240	.	-	0	Parent=FBgn0004577.1.mrna1;Target=FBgn0004577.1 52 410 +
Chr2	gffcl	locus	118119179	118120695	.	+	.	ID=RLOC_00020964;geneIDs=FBgn0038467.1.path2;transcripts=FBgn0038467.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	118119179	118120695	.	+	.	ID=FBgn0038467.1.mrna2;geneID=FBgn0038467.1.path2;Name=FBgn0038467.1;Dir=sensecoverage=99.8;identity=99.5;matches=1457;mismatches=7;indels=0;unknowns=0;locus=RLOC_00020964
Chr2	stalkie_big_nohaplotig	exon	118119179	118119337	99	+	.	Parent=FBgn0038467.1.mrna2;Target=FBgn0038467.1 4 162 +
Chr2	stalkie_big_nohaplotig	exon	118119391	118120695	99	+	.	Parent=FBgn0038467.1.mrna2;Target=FBgn0038467.1 163 1467 +
Chr2	stalkie_big_nohaplotig	CDS	118119179	118119337	.	+	0	Parent=FBgn0038467.1.mrna2;Target=FBgn0038467.1 4 162 +
Chr2	stalkie_big_nohaplotig	CDS	118119391	118120695	.	+	0	Parent=FBgn0038467.1.mrna2;Target=FBgn0038467.1 163 1467 +
Chr2	gffcl	locus	118140597	118142113	.	-	.	ID=RLOC_00020965;geneIDs=FBgn0038467.1.path1;transcripts=FBgn0038467.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118140597	118142113	.	-	.	ID=FBgn0038467.1.mrna1;geneID=FBgn0038467.1.path1;Name=FBgn0038467.1;Dir=sensecoverage=99.8;identity=99.6;matches=1458;mismatches=6;indels=0;unknowns=0;locus=RLOC_00020965
Chr2	stalkie_big_nohaplotig	exon	118140597	118141901	99	-	.	Parent=FBgn0038467.1.mrna1;Target=FBgn0038467.1 163 1467 +
Chr2	stalkie_big_nohaplotig	exon	118141955	118142113	99	-	.	Parent=FBgn0038467.1.mrna1;Target=FBgn0038467.1 4 162 +
Chr2	stalkie_big_nohaplotig	CDS	118140597	118141901	.	-	0	Parent=FBgn0038467.1.mrna1;Target=FBgn0038467.1 163 1467 +
Chr2	stalkie_big_nohaplotig	CDS	118141955	118142113	.	-	0	Parent=FBgn0038467.1.mrna1;Target=FBgn0038467.1 4 162 +
Chr2	gffcl	locus	118164878	118167815	.	-	.	ID=RLOC_00020966;geneIDs=FBgn0038466.1.path1;transcripts=FBgn0038466.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118164878	118167815	.	-	.	ID=FBgn0038466.1.mrna1;geneID=FBgn0038466.1.path1;Name=FBgn0038466.1;Dir=sensecoverage=100.0;identity=100.0;matches=2115;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020966
Chr2	stalkie_big_nohaplotig	exon	118164878	118164970	100	-	.	Parent=FBgn0038466.1.mrna1;Target=FBgn0038466.1 2023 2115 +
Chr2	stalkie_big_nohaplotig	exon	118165033	118165367	100	-	.	Parent=FBgn0038466.1.mrna1;Target=FBgn0038466.1 1688 2022 +
Chr2	stalkie_big_nohaplotig	exon	118165937	118166152	100	-	.	Parent=FBgn0038466.1.mrna1;Target=FBgn0038466.1 1472 1687 +
Chr2	stalkie_big_nohaplotig	exon	118166210	118166366	100	-	.	Parent=FBgn0038466.1.mrna1;Target=FBgn0038466.1 1315 1471 +
Chr2	stalkie_big_nohaplotig	exon	118166442	118167347	100	-	.	Parent=FBgn0038466.1.mrna1;Target=FBgn0038466.1 409 1314 +
Chr2	stalkie_big_nohaplotig	exon	118167408	118167815	100	-	.	Parent=FBgn0038466.1.mrna1;Target=FBgn0038466.1 1 408 +
Chr2	stalkie_big_nohaplotig	CDS	118164878	118164970	.	-	0	Parent=FBgn0038466.1.mrna1;Target=FBgn0038466.1 2023 2115 +
Chr2	stalkie_big_nohaplotig	CDS	118165033	118165367	.	-	2	Parent=FBgn0038466.1.mrna1;Target=FBgn0038466.1 1688 2022 +
Chr2	stalkie_big_nohaplotig	CDS	118165937	118166152	.	-	2	Parent=FBgn0038466.1.mrna1;Target=FBgn0038466.1 1472 1687 +
Chr2	stalkie_big_nohaplotig	CDS	118166210	118166366	.	-	0	Parent=FBgn0038466.1.mrna1;Target=FBgn0038466.1 1315 1471 +
Chr2	stalkie_big_nohaplotig	CDS	118166442	118167347	.	-	0	Parent=FBgn0038466.1.mrna1;Target=FBgn0038466.1 409 1314 +
Chr2	stalkie_big_nohaplotig	CDS	118167408	118167815	.	-	0	Parent=FBgn0038466.1.mrna1;Target=FBgn0038466.1 1 408 +
Chr2	gffcl	locus	118176739	118197171	.	-	.	ID=RLOC_00020967;geneIDs=FBgn0038465.1.path1;transcripts=FBgn0038465.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118176739	118197171	.	-	.	ID=FBgn0038465.1.mrna1;geneID=FBgn0038465.1.path1;Name=FBgn0038465.1;Dir=sensecoverage=100.0;identity=100.0;matches=2151;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020967
Chr2	stalkie_big_nohaplotig	exon	118176739	118176778	100	-	.	Parent=FBgn0038465.1.mrna1;Target=FBgn0038465.1 2112 2151 +
Chr2	stalkie_big_nohaplotig	exon	118183583	118183742	100	-	.	Parent=FBgn0038465.1.mrna1;Target=FBgn0038465.1 1952 2111 +
Chr2	stalkie_big_nohaplotig	exon	118187310	118187430	100	-	.	Parent=FBgn0038465.1.mrna1;Target=FBgn0038465.1 1831 1951 +
Chr2	stalkie_big_nohaplotig	exon	118187497	118187661	100	-	.	Parent=FBgn0038465.1.mrna1;Target=FBgn0038465.1 1666 1830 +
Chr2	stalkie_big_nohaplotig	exon	118190855	118191002	100	-	.	Parent=FBgn0038465.1.mrna1;Target=FBgn0038465.1 1518 1665 +
Chr2	stalkie_big_nohaplotig	exon	118191065	118191666	100	-	.	Parent=FBgn0038465.1.mrna1;Target=FBgn0038465.1 916 1517 +
Chr2	stalkie_big_nohaplotig	exon	118191738	118191925	100	-	.	Parent=FBgn0038465.1.mrna1;Target=FBgn0038465.1 728 915 +
Chr2	stalkie_big_nohaplotig	exon	118191979	118192153	100	-	.	Parent=FBgn0038465.1.mrna1;Target=FBgn0038465.1 553 727 +
Chr2	stalkie_big_nohaplotig	exon	118192219	118192549	100	-	.	Parent=FBgn0038465.1.mrna1;Target=FBgn0038465.1 222 552 +
Chr2	stalkie_big_nohaplotig	exon	118192614	118192722	100	-	.	Parent=FBgn0038465.1.mrna1;Target=FBgn0038465.1 113 221 +
Chr2	stalkie_big_nohaplotig	exon	118197060	118197171	100	-	.	Parent=FBgn0038465.1.mrna1;Target=FBgn0038465.1 1 112 +
Chr2	stalkie_big_nohaplotig	CDS	118176739	118176778	.	-	1	Parent=FBgn0038465.1.mrna1;Target=FBgn0038465.1 2112 2151 +
Chr2	stalkie_big_nohaplotig	CDS	118183583	118183742	.	-	2	Parent=FBgn0038465.1.mrna1;Target=FBgn0038465.1 1952 2111 +
Chr2	stalkie_big_nohaplotig	CDS	118187310	118187430	.	-	0	Parent=FBgn0038465.1.mrna1;Target=FBgn0038465.1 1831 1951 +
Chr2	stalkie_big_nohaplotig	CDS	118187497	118187661	.	-	0	Parent=FBgn0038465.1.mrna1;Target=FBgn0038465.1 1666 1830 +
Chr2	stalkie_big_nohaplotig	CDS	118190855	118191002	.	-	1	Parent=FBgn0038465.1.mrna1;Target=FBgn0038465.1 1518 1665 +
Chr2	stalkie_big_nohaplotig	CDS	118191065	118191666	.	-	0	Parent=FBgn0038465.1.mrna1;Target=FBgn0038465.1 916 1517 +
Chr2	stalkie_big_nohaplotig	CDS	118191738	118191925	.	-	2	Parent=FBgn0038465.1.mrna1;Target=FBgn0038465.1 728 915 +
Chr2	stalkie_big_nohaplotig	CDS	118191979	118192153	.	-	0	Parent=FBgn0038465.1.mrna1;Target=FBgn0038465.1 553 727 +
Chr2	stalkie_big_nohaplotig	CDS	118192219	118192549	.	-	1	Parent=FBgn0038465.1.mrna1;Target=FBgn0038465.1 222 552 +
Chr2	stalkie_big_nohaplotig	CDS	118192614	118192722	.	-	2	Parent=FBgn0038465.1.mrna1;Target=FBgn0038465.1 113 221 +
Chr2	stalkie_big_nohaplotig	CDS	118197060	118197171	.	-	0	Parent=FBgn0038465.1.mrna1;Target=FBgn0038465.1 1 112 +
Chr2	gffcl	locus	118186818	118187268	.	+	.	ID=RLOC_00020968;geneIDs=comp143553_c0_seq1.path1;transcripts=comp143553_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118186818	118187268	.	+	.	ID=comp143553_c0_seq1.mrna1;geneID=comp143553_c0_seq1.path1;Name=comp143553_c0_seq1;Dir=indeterminatecoverage=76.5;identity=99.6;matches=450;mismatches=1;indels=1;unknowns=0;Target=comp143553_c0_seq1 591 140 .;CDS_Target=comp143553_c0_seq1 331 179 .;locus=RLOC_00020968
Chr2	stalkie_big_nohaplotig	exon	118186818	118187268	99	+	.	Parent=comp143553_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118186857	118187008	.	+	0	Parent=comp143553_c0_seq1.mrna1
Chr2	gffcl	locus	118189117	118189306	.	-	.	ID=RLOC_00020969;geneIDs=comp110651_c0_seq1.path1;transcripts=comp110651_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118189117	118189306	.	-	.	ID=comp110651_c0_seq1.mrna1;geneID=comp110651_c0_seq1.path1;Name=comp110651_c0_seq1;Dir=indeterminatecoverage=73.6;identity=96.3;matches=183;mismatches=7;indels=0;unknowns=0;Target=comp110651_c0_seq1 222 33 .;CDS_Target=comp110651_c0_seq1 127 35 .;locus=RLOC_00020969
Chr2	stalkie_big_nohaplotig	exon	118189117	118189306	96	-	.	Parent=comp110651_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118189212	118189304	.	-	0	Parent=comp110651_c0_seq1.mrna1
Chr2	gffcl	locus	118190028	118190734	.	-	.	ID=RLOC_00020970;geneIDs=comp147226_c1_seq1.path1;transcripts=comp147226_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118190028	118190734	.	-	.	ID=comp147226_c1_seq1.mrna1;geneID=comp147226_c1_seq1.path1;Name=comp147226_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=706;mismatches=0;indels=1;unknowns=0;Target=comp147226_c1_seq1 706 1 .;CDS_Target=comp147226_c1_seq1 64 2 .;locus=RLOC_00020970
Chr2	stalkie_big_nohaplotig	exon	118190028	118190734	99	-	.	Parent=comp147226_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118190670	118190733	.	-	0	Parent=comp147226_c1_seq1.mrna1
Chr2	gffcl	locus	118201224	118202079	.	+	.	ID=RLOC_00020971;geneIDs=FBgn0031398.1.path1;transcripts=FBgn0031398.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118201224	118202079	.	+	.	ID=FBgn0031398.1.mrna1;geneID=FBgn0031398.1.path1;Name=FBgn0031398.1;Dir=sensecoverage=100.0;identity=100.0;matches=735;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020971
Chr2	stalkie_big_nohaplotig	exon	118201224	118201591	100	+	.	Parent=FBgn0031398.1.mrna1;Target=FBgn0031398.1 1 368 +
Chr2	stalkie_big_nohaplotig	exon	118201655	118201892	100	+	.	Parent=FBgn0031398.1.mrna1;Target=FBgn0031398.1 369 606 +
Chr2	stalkie_big_nohaplotig	exon	118201951	118202079	100	+	.	Parent=FBgn0031398.1.mrna1;Target=FBgn0031398.1 607 735 +
Chr2	stalkie_big_nohaplotig	CDS	118201224	118201591	.	+	0	Parent=FBgn0031398.1.mrna1;Target=FBgn0031398.1 1 368 +
Chr2	stalkie_big_nohaplotig	CDS	118201655	118201892	.	+	1	Parent=FBgn0031398.1.mrna1;Target=FBgn0031398.1 369 606 +
Chr2	stalkie_big_nohaplotig	CDS	118201951	118202079	.	+	0	Parent=FBgn0031398.1.mrna1;Target=FBgn0031398.1 607 735 +
Chr2	gffcl	locus	118203617	118207609	.	+	.	ID=RLOC_00020972;geneIDs=FBgn0038464.1.path1;transcripts=FBgn0038464.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118203617	118207609	.	+	.	ID=FBgn0038464.1.mrna1;geneID=FBgn0038464.1.path1;Name=FBgn0038464.1;Dir=sensecoverage=100.0;identity=100.0;matches=2334;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020972
Chr2	stalkie_big_nohaplotig	exon	118203617	118203737	100	+	.	Parent=FBgn0038464.1.mrna1;Target=FBgn0038464.1 1 121 +
Chr2	stalkie_big_nohaplotig	exon	118203810	118203974	100	+	.	Parent=FBgn0038464.1.mrna1;Target=FBgn0038464.1 122 286 +
Chr2	stalkie_big_nohaplotig	exon	118204036	118204207	100	+	.	Parent=FBgn0038464.1.mrna1;Target=FBgn0038464.1 287 458 +
Chr2	stalkie_big_nohaplotig	exon	118204265	118204590	100	+	.	Parent=FBgn0038464.1.mrna1;Target=FBgn0038464.1 459 784 +
Chr2	stalkie_big_nohaplotig	exon	118204649	118205496	100	+	.	Parent=FBgn0038464.1.mrna1;Target=FBgn0038464.1 785 1632 +
Chr2	stalkie_big_nohaplotig	exon	118205551	118205782	100	+	.	Parent=FBgn0038464.1.mrna1;Target=FBgn0038464.1 1633 1864 +
Chr2	stalkie_big_nohaplotig	exon	118205849	118206045	100	+	.	Parent=FBgn0038464.1.mrna1;Target=FBgn0038464.1 1865 2061 +
Chr2	stalkie_big_nohaplotig	exon	118206109	118206282	100	+	.	Parent=FBgn0038464.1.mrna1;Target=FBgn0038464.1 2062 2235 +
Chr2	stalkie_big_nohaplotig	exon	118207511	118207609	100	+	.	Parent=FBgn0038464.1.mrna1;Target=FBgn0038464.1 2236 2334 +
Chr2	stalkie_big_nohaplotig	CDS	118203617	118203737	.	+	0	Parent=FBgn0038464.1.mrna1;Target=FBgn0038464.1 1 121 +
Chr2	stalkie_big_nohaplotig	CDS	118203810	118203974	.	+	2	Parent=FBgn0038464.1.mrna1;Target=FBgn0038464.1 122 286 +
Chr2	stalkie_big_nohaplotig	CDS	118204036	118204207	.	+	2	Parent=FBgn0038464.1.mrna1;Target=FBgn0038464.1 287 458 +
Chr2	stalkie_big_nohaplotig	CDS	118204265	118204590	.	+	1	Parent=FBgn0038464.1.mrna1;Target=FBgn0038464.1 459 784 +
Chr2	stalkie_big_nohaplotig	CDS	118204649	118205496	.	+	2	Parent=FBgn0038464.1.mrna1;Target=FBgn0038464.1 785 1632 +
Chr2	stalkie_big_nohaplotig	CDS	118205551	118205782	.	+	0	Parent=FBgn0038464.1.mrna1;Target=FBgn0038464.1 1633 1864 +
Chr2	stalkie_big_nohaplotig	CDS	118205849	118206045	.	+	2	Parent=FBgn0038464.1.mrna1;Target=FBgn0038464.1 1865 2061 +
Chr2	stalkie_big_nohaplotig	CDS	118206109	118206282	.	+	0	Parent=FBgn0038464.1.mrna1;Target=FBgn0038464.1 2062 2235 +
Chr2	stalkie_big_nohaplotig	CDS	118207511	118207609	.	+	0	Parent=FBgn0038464.1.mrna1;Target=FBgn0038464.1 2236 2334 +
Chr2	gffcl	locus	118207894	118212051	.	.	.	ID=RLOC_00020973;geneIDs=FBgn0038463.1.path1,comp157624_c1_seq1.path1;transcripts=FBgn0038463.1.mrna1,comp157624_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118207894	118212051	.	-	.	ID=FBgn0038463.1.mrna1;geneID=FBgn0038463.1.path1;Name=FBgn0038463.1;Dir=sensecoverage=100.0;identity=100.0;matches=1764;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020973
Chr2	stalkie_big_nohaplotig	exon	118207894	118208151	100	-	.	Parent=FBgn0038463.1.mrna1;Target=FBgn0038463.1 1507 1764 +
Chr2	stalkie_big_nohaplotig	exon	118208210	118208399	100	-	.	Parent=FBgn0038463.1.mrna1;Target=FBgn0038463.1 1317 1506 +
Chr2	stalkie_big_nohaplotig	exon	118208488	118208709	100	-	.	Parent=FBgn0038463.1.mrna1;Target=FBgn0038463.1 1095 1316 +
Chr2	stalkie_big_nohaplotig	exon	118208781	118209496	100	-	.	Parent=FBgn0038463.1.mrna1;Target=FBgn0038463.1 379 1094 +
Chr2	stalkie_big_nohaplotig	exon	118209559	118209670	100	-	.	Parent=FBgn0038463.1.mrna1;Target=FBgn0038463.1 267 378 +
Chr2	stalkie_big_nohaplotig	exon	118209756	118209877	100	-	.	Parent=FBgn0038463.1.mrna1;Target=FBgn0038463.1 145 266 +
Chr2	stalkie_big_nohaplotig	exon	118211908	118212051	100	-	.	Parent=FBgn0038463.1.mrna1;Target=FBgn0038463.1 1 144 +
Chr2	stalkie_big_nohaplotig	CDS	118207894	118208151	.	-	0	Parent=FBgn0038463.1.mrna1;Target=FBgn0038463.1 1507 1764 +
Chr2	stalkie_big_nohaplotig	CDS	118208210	118208399	.	-	1	Parent=FBgn0038463.1.mrna1;Target=FBgn0038463.1 1317 1506 +
Chr2	stalkie_big_nohaplotig	CDS	118208488	118208709	.	-	1	Parent=FBgn0038463.1.mrna1;Target=FBgn0038463.1 1095 1316 +
Chr2	stalkie_big_nohaplotig	CDS	118208781	118209496	.	-	0	Parent=FBgn0038463.1.mrna1;Target=FBgn0038463.1 379 1094 +
Chr2	stalkie_big_nohaplotig	CDS	118209559	118209670	.	-	1	Parent=FBgn0038463.1.mrna1;Target=FBgn0038463.1 267 378 +
Chr2	stalkie_big_nohaplotig	CDS	118209756	118209877	.	-	0	Parent=FBgn0038463.1.mrna1;Target=FBgn0038463.1 145 266 +
Chr2	stalkie_big_nohaplotig	CDS	118211908	118212051	.	-	0	Parent=FBgn0038463.1.mrna1;Target=FBgn0038463.1 1 144 +
Chr2	stalkie_big_nohaplotig	mRNA	118209857	118211886	.	+	.	ID=comp157624_c1_seq1.mrna1;geneID=comp157624_c1_seq1.path1;Name=comp157624_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2029;mismatches=1;indels=0;unknowns=0;Target=comp157624_c1_seq1 2031 2 .;CDS_Target=comp157624_c1_seq1 516 343 .;locus=RLOC_00020973
Chr2	stalkie_big_nohaplotig	exon	118209857	118211886	99	+	.	Parent=comp157624_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118210198	118210371	.	+	0	Parent=comp157624_c1_seq1.mrna1
Chr2	gffcl	locus	118346523	118352503	.	+	.	ID=RLOC_00020974;geneIDs=FBgn0038063.path1;transcripts=FBgn0038063.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118346523	118352503	.	+	.	ID=FBgn0038063.mrna1;geneID=FBgn0038063.path1;Name=FBgn0038063;Dir=sensecoverage=100.0;identity=100.0;matches=879;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020974
Chr2	stalkie_big_nohaplotig	exon	118346523	118346539	100	+	.	Parent=FBgn0038063.mrna1;Target=FBgn0038063 1 17 +
Chr2	stalkie_big_nohaplotig	exon	118348192	118348556	100	+	.	Parent=FBgn0038063.mrna1;Target=FBgn0038063 18 382 +
Chr2	stalkie_big_nohaplotig	exon	118349260	118349437	100	+	.	Parent=FBgn0038063.mrna1;Target=FBgn0038063 383 560 +
Chr2	stalkie_big_nohaplotig	exon	118352185	118352503	100	+	.	Parent=FBgn0038063.mrna1;Target=FBgn0038063 561 879 +
Chr2	stalkie_big_nohaplotig	CDS	118346523	118346539	.	+	0	Parent=FBgn0038063.mrna1;Target=FBgn0038063 1 17 +
Chr2	stalkie_big_nohaplotig	CDS	118348192	118348556	.	+	1	Parent=FBgn0038063.mrna1;Target=FBgn0038063 18 382 +
Chr2	stalkie_big_nohaplotig	CDS	118349260	118349437	.	+	2	Parent=FBgn0038063.mrna1;Target=FBgn0038063 383 560 +
Chr2	stalkie_big_nohaplotig	CDS	118352185	118352503	.	+	1	Parent=FBgn0038063.mrna1;Target=FBgn0038063 561 879 +
Chr2	gffcl	locus	118358558	118358984	.	-	.	ID=RLOC_00020975;geneIDs=comp114493_c0_seq1.path1;transcripts=comp114493_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118358558	118358984	.	-	.	ID=comp114493_c0_seq1.mrna1;geneID=comp114493_c0_seq1.path1;Name=comp114493_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=426;mismatches=1;indels=1;unknowns=0;Target=comp114493_c0_seq1 428 1 .;CDS_Target=comp114493_c0_seq1 393 277 .;locus=RLOC_00020975
Chr2	stalkie_big_nohaplotig	exon	118358558	118358984	99	-	.	Parent=comp114493_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118358593	118358708	.	-	0	Parent=comp114493_c0_seq1.mrna1
Chr2	gffcl	locus	118406574	118406885	.	+	.	ID=RLOC_00020976;geneIDs=comp148117_c0_seq1.path1;transcripts=comp148117_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118406574	118406885	.	+	.	ID=comp148117_c0_seq1.mrna1;geneID=comp148117_c0_seq1.path1;Name=comp148117_c0_seq1;Dir=indeterminatecoverage=99.0;identity=97.8;matches=305;mismatches=7;indels=0;unknowns=0;Target=comp148117_c0_seq1 312 1 .;CDS_Target=comp148117_c0_seq1 186 103 .;locus=RLOC_00020976
Chr2	stalkie_big_nohaplotig	exon	118406574	118406885	97	+	.	Parent=comp148117_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118406676	118406759	.	+	0	Parent=comp148117_c0_seq1.mrna1
Chr2	gffcl	locus	118407486	118412883	.	-	.	ID=RLOC_00020977;geneIDs=FBgn0028374.1.path1;transcripts=FBgn0028374.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118407486	118412883	.	-	.	ID=FBgn0028374.1.mrna1;geneID=FBgn0028374.1.path1;Name=FBgn0028374.1;Dir=sensecoverage=100.0;identity=99.3;matches=557;mismatches=4;indels=0;unknowns=0;locus=RLOC_00020977
Chr2	stalkie_big_nohaplotig	exon	118407486	118407682	100	-	.	Parent=FBgn0028374.1.mrna1;Target=FBgn0028374.1 365 561 +
Chr2	stalkie_big_nohaplotig	exon	118408022	118408292	99	-	.	Parent=FBgn0028374.1.mrna1;Target=FBgn0028374.1 94 364 +
Chr2	stalkie_big_nohaplotig	exon	118412791	118412883	96	-	.	Parent=FBgn0028374.1.mrna1;Target=FBgn0028374.1 1 93 +
Chr2	stalkie_big_nohaplotig	CDS	118407486	118407682	.	-	2	Parent=FBgn0028374.1.mrna1;Target=FBgn0028374.1 365 561 +
Chr2	stalkie_big_nohaplotig	CDS	118408022	118408292	.	-	0	Parent=FBgn0028374.1.mrna1;Target=FBgn0028374.1 94 364 +
Chr2	stalkie_big_nohaplotig	CDS	118412791	118412883	.	-	0	Parent=FBgn0028374.1.mrna1;Target=FBgn0028374.1 1 93 +
Chr2	gffcl	locus	118418960	118421268	.	+	.	ID=RLOC_00020978;geneIDs=CPIJ003908.1.path3;transcripts=CPIJ003908.1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	118418960	118421268	.	+	.	ID=CPIJ003908.1.mrna3;geneID=CPIJ003908.1.path3;Name=CPIJ003908.1;Dir=indeterminatecoverage=93.4;identity=99.7;matches=2302;mismatches=7;indels=0;unknowns=0;Target=CPIJ003908.1 2435 127 .;CDS_Target=CPIJ003908.1 2433 127 .;locus=RLOC_00020978
Chr2	stalkie_big_nohaplotig	exon	118418960	118421268	99	+	.	Parent=CPIJ003908.1.mrna3
Chr2	stalkie_big_nohaplotig	CDS	118418960	118421266	.	+	0	Parent=CPIJ003908.1.mrna3
Chr2	gffcl	locus	118430180	118453467	.	+	.	ID=RLOC_00020979;geneIDs=FBgn0250910.1.path1;transcripts=FBgn0250910.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118430180	118453467	.	+	.	ID=FBgn0250910.1.mrna1;geneID=FBgn0250910.1.path1;Name=FBgn0250910.1;Dir=sensecoverage=100.0;identity=99.4;matches=4243;mismatches=23;indels=3;unknowns=0;locus=RLOC_00020979
Chr2	stalkie_big_nohaplotig	exon	118430180	118430859	99	+	.	Parent=FBgn0250910.1.mrna1;Target=FBgn0250910.1 1 683 +
Chr2	stalkie_big_nohaplotig	exon	118435651	118435851	100	+	.	Parent=FBgn0250910.1.mrna1;Target=FBgn0250910.1 684 884 +
Chr2	stalkie_big_nohaplotig	exon	118438666	118438941	100	+	.	Parent=FBgn0250910.1.mrna1;Target=FBgn0250910.1 885 1160 +
Chr2	stalkie_big_nohaplotig	exon	118439022	118439193	100	+	.	Parent=FBgn0250910.1.mrna1;Target=FBgn0250910.1 1161 1332 +
Chr2	stalkie_big_nohaplotig	exon	118439464	118441741	99	+	.	Parent=FBgn0250910.1.mrna1;Target=FBgn0250910.1 1333 3610 +
Chr2	stalkie_big_nohaplotig	exon	118445309	118445650	99	+	.	Parent=FBgn0250910.1.mrna1;Target=FBgn0250910.1 3611 3952 +
Chr2	stalkie_big_nohaplotig	exon	118452296	118452404	99	+	.	Parent=FBgn0250910.1.mrna1;Target=FBgn0250910.1 3953 4061 +
Chr2	stalkie_big_nohaplotig	exon	118453260	118453467	99	+	.	Parent=FBgn0250910.1.mrna1;Target=FBgn0250910.1 4062 4269 +
Chr2	stalkie_big_nohaplotig	CDS	118430180	118430859	.	+	0	Parent=FBgn0250910.1.mrna1;Target=FBgn0250910.1 1 683 +
Chr2	stalkie_big_nohaplotig	CDS	118435651	118435851	.	+	1	Parent=FBgn0250910.1.mrna1;Target=FBgn0250910.1 684 884 +
Chr2	stalkie_big_nohaplotig	CDS	118438666	118438941	.	+	1	Parent=FBgn0250910.1.mrna1;Target=FBgn0250910.1 885 1160 +
Chr2	stalkie_big_nohaplotig	CDS	118439022	118439193	.	+	1	Parent=FBgn0250910.1.mrna1;Target=FBgn0250910.1 1161 1332 +
Chr2	stalkie_big_nohaplotig	CDS	118439464	118441741	.	+	0	Parent=FBgn0250910.1.mrna1;Target=FBgn0250910.1 1333 3610 +
Chr2	stalkie_big_nohaplotig	CDS	118445309	118445650	.	+	2	Parent=FBgn0250910.1.mrna1;Target=FBgn0250910.1 3611 3952 +
Chr2	stalkie_big_nohaplotig	CDS	118452296	118452404	.	+	2	Parent=FBgn0250910.1.mrna1;Target=FBgn0250910.1 3953 4061 +
Chr2	stalkie_big_nohaplotig	CDS	118453260	118453467	.	+	1	Parent=FBgn0250910.1.mrna1;Target=FBgn0250910.1 4062 4269 +
Chr2	gffcl	locus	118455774	118456511	.	-	.	ID=RLOC_00020980;geneIDs=comp156011_c0_seq1.path1;transcripts=comp156011_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118455774	118456511	.	-	.	ID=comp156011_c0_seq1.mrna1;geneID=comp156011_c0_seq1.path1;Name=comp156011_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.5;matches=734;mismatches=4;indels=0;unknowns=0;Target=comp156011_c0_seq1 738 1 .;CDS_Target=comp156011_c0_seq1 659 582 .;locus=RLOC_00020980
Chr2	stalkie_big_nohaplotig	exon	118455774	118456511	99	-	.	Parent=comp156011_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118455853	118455930	.	-	0	Parent=comp156011_c0_seq1.mrna1
Chr2	gffcl	locus	118456618	118457094	.	+	.	ID=RLOC_00020981;geneIDs=comp155047_c0_seq1.path1;transcripts=comp155047_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118456618	118457094	.	+	.	ID=comp155047_c0_seq1.mrna1;geneID=comp155047_c0_seq1.path1;Name=comp155047_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=470;mismatches=6;indels=3;unknowns=0;Target=comp155047_c0_seq1 478 1 .;CDS_Target=comp155047_c0_seq1 48 1 .;locus=RLOC_00020981
Chr2	stalkie_big_nohaplotig	exon	118456618	118457094	98	+	.	Parent=comp155047_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118456618	118456665	.	+	0	Parent=comp155047_c0_seq1.mrna1
Chr2	gffcl	locus	118459259	118460474	.	-	.	ID=RLOC_00020982;geneIDs=FBgn0038674.1.path1;transcripts=FBgn0038674.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118459259	118460474	.	-	.	ID=FBgn0038674.1.mrna1;geneID=FBgn0038674.1.path1;Name=FBgn0038674.1;Dir=sensecoverage=100.0;identity=100.0;matches=921;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020982
Chr2	stalkie_big_nohaplotig	exon	118459259	118459483	100	-	.	Parent=FBgn0038674.1.mrna1;Target=FBgn0038674.1 697 921 +
Chr2	stalkie_big_nohaplotig	exon	118459554	118460102	100	-	.	Parent=FBgn0038674.1.mrna1;Target=FBgn0038674.1 148 696 +
Chr2	stalkie_big_nohaplotig	exon	118460328	118460474	100	-	.	Parent=FBgn0038674.1.mrna1;Target=FBgn0038674.1 1 147 +
Chr2	stalkie_big_nohaplotig	CDS	118459259	118459483	.	-	0	Parent=FBgn0038674.1.mrna1;Target=FBgn0038674.1 697 921 +
Chr2	stalkie_big_nohaplotig	CDS	118459554	118460102	.	-	0	Parent=FBgn0038674.1.mrna1;Target=FBgn0038674.1 148 696 +
Chr2	stalkie_big_nohaplotig	CDS	118460328	118460474	.	-	0	Parent=FBgn0038674.1.mrna1;Target=FBgn0038674.1 1 147 +
Chr2	gffcl	locus	118460522	118460754	.	-	.	ID=RLOC_00020983;geneIDs=comp130876_c0_seq1.path1;transcripts=comp130876_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118460522	118460754	.	-	.	ID=comp130876_c0_seq1.mrna1;geneID=comp130876_c0_seq1.path1;Name=comp130876_c0_seq1;Dir=indeterminatecoverage=89.6;identity=99.6;matches=232;mismatches=1;indels=0;unknowns=0;Target=comp130876_c0_seq1 233 1 .;CDS_Target=comp130876_c0_seq1 231 181 .;locus=RLOC_00020983
Chr2	stalkie_big_nohaplotig	exon	118460522	118460754	99	-	.	Parent=comp130876_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118460524	118460574	.	-	0	Parent=comp130876_c0_seq1.mrna1
Chr2	gffcl	locus	118472576	118475507	.	-	.	ID=RLOC_00020985;geneIDs=FBgn0037758.1.path1;transcripts=FBgn0037758.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118472576	118475507	.	-	.	ID=FBgn0037758.1.mrna1;geneID=FBgn0037758.1.path1;Name=FBgn0037758.1;Dir=sensecoverage=100.0;identity=99.9;matches=2418;mismatches=0;indels=3;unknowns=0;locus=RLOC_00020985
Chr2	stalkie_big_nohaplotig	exon	118472576	118473274	99	-	.	Parent=FBgn0037758.1.mrna1;Target=FBgn0037758.1 1720 2421 +
Chr2	stalkie_big_nohaplotig	exon	118473329	118473468	100	-	.	Parent=FBgn0037758.1.mrna1;Target=FBgn0037758.1 1580 1719 +
Chr2	stalkie_big_nohaplotig	exon	118473630	118473749	100	-	.	Parent=FBgn0037758.1.mrna1;Target=FBgn0037758.1 1460 1579 +
Chr2	stalkie_big_nohaplotig	exon	118473819	118474131	100	-	.	Parent=FBgn0037758.1.mrna1;Target=FBgn0037758.1 1147 1459 +
Chr2	stalkie_big_nohaplotig	exon	118474204	118475179	100	-	.	Parent=FBgn0037758.1.mrna1;Target=FBgn0037758.1 171 1146 +
Chr2	stalkie_big_nohaplotig	exon	118475338	118475507	100	-	.	Parent=FBgn0037758.1.mrna1;Target=FBgn0037758.1 1 170 +
Chr2	stalkie_big_nohaplotig	CDS	118472576	118473274	.	-	0	Parent=FBgn0037758.1.mrna1;Target=FBgn0037758.1 1720 2421 +
Chr2	stalkie_big_nohaplotig	CDS	118473329	118473468	.	-	2	Parent=FBgn0037758.1.mrna1;Target=FBgn0037758.1 1580 1719 +
Chr2	stalkie_big_nohaplotig	CDS	118473630	118473749	.	-	2	Parent=FBgn0037758.1.mrna1;Target=FBgn0037758.1 1460 1579 +
Chr2	stalkie_big_nohaplotig	CDS	118473819	118474131	.	-	0	Parent=FBgn0037758.1.mrna1;Target=FBgn0037758.1 1147 1459 +
Chr2	stalkie_big_nohaplotig	CDS	118474204	118475179	.	-	1	Parent=FBgn0037758.1.mrna1;Target=FBgn0037758.1 171 1146 +
Chr2	stalkie_big_nohaplotig	CDS	118475338	118475507	.	-	0	Parent=FBgn0037758.1.mrna1;Target=FBgn0037758.1 1 170 +
Chr2	gffcl	locus	118480416	118481938	.	+	.	ID=RLOC_00020986;geneIDs=comp161358_c0_seq1.path1;transcripts=comp161358_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118480416	118481938	.	+	.	ID=comp161358_c0_seq1.mrna1;geneID=comp161358_c0_seq1.path1;Name=comp161358_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.8;matches=1520;mismatches=3;indels=0;unknowns=0;Target=comp161358_c0_seq1 1529 7 .;CDS_Target=comp161358_c0_seq1 395 264 .;locus=RLOC_00020986
Chr2	stalkie_big_nohaplotig	exon	118480416	118481938	99	+	.	Parent=comp161358_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118480673	118480804	.	+	0	Parent=comp161358_c0_seq1.mrna1
Chr2	gffcl	locus	118482394	118488800	.	-	.	ID=RLOC_00020987;geneIDs=FBgn0037760.1.path1;transcripts=FBgn0037760.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118482394	118488800	.	-	.	ID=FBgn0037760.1.mrna1;geneID=FBgn0037760.1.path1;Name=FBgn0037760.1;Dir=sensecoverage=100.0;identity=99.9;matches=3558;mismatches=3;indels=0;unknowns=0;locus=RLOC_00020987
Chr2	stalkie_big_nohaplotig	exon	118482394	118482520	100	-	.	Parent=FBgn0037760.1.mrna1;Target=FBgn0037760.1 3435 3561 +
Chr2	stalkie_big_nohaplotig	exon	118482859	118483592	100	-	.	Parent=FBgn0037760.1.mrna1;Target=FBgn0037760.1 2701 3434 +
Chr2	stalkie_big_nohaplotig	exon	118485594	118485934	100	-	.	Parent=FBgn0037760.1.mrna1;Target=FBgn0037760.1 2360 2700 +
Chr2	stalkie_big_nohaplotig	exon	118486079	118486259	100	-	.	Parent=FBgn0037760.1.mrna1;Target=FBgn0037760.1 2179 2359 +
Chr2	stalkie_big_nohaplotig	exon	118486323	118487075	100	-	.	Parent=FBgn0037760.1.mrna1;Target=FBgn0037760.1 1426 2178 +
Chr2	stalkie_big_nohaplotig	exon	118487139	118487965	100	-	.	Parent=FBgn0037760.1.mrna1;Target=FBgn0037760.1 599 1425 +
Chr2	stalkie_big_nohaplotig	exon	118488081	118488134	100	-	.	Parent=FBgn0037760.1.mrna1;Target=FBgn0037760.1 545 598 +
Chr2	stalkie_big_nohaplotig	exon	118488187	118488633	99	-	.	Parent=FBgn0037760.1.mrna1;Target=FBgn0037760.1 98 544 +
Chr2	stalkie_big_nohaplotig	exon	118488704	118488800	100	-	.	Parent=FBgn0037760.1.mrna1;Target=FBgn0037760.1 1 97 +
Chr2	stalkie_big_nohaplotig	CDS	118482394	118482520	.	-	1	Parent=FBgn0037760.1.mrna1;Target=FBgn0037760.1 3435 3561 +
Chr2	stalkie_big_nohaplotig	CDS	118482859	118483592	.	-	0	Parent=FBgn0037760.1.mrna1;Target=FBgn0037760.1 2701 3434 +
Chr2	stalkie_big_nohaplotig	CDS	118485594	118485934	.	-	2	Parent=FBgn0037760.1.mrna1;Target=FBgn0037760.1 2360 2700 +
Chr2	stalkie_big_nohaplotig	CDS	118486079	118486259	.	-	0	Parent=FBgn0037760.1.mrna1;Target=FBgn0037760.1 2179 2359 +
Chr2	stalkie_big_nohaplotig	CDS	118486323	118487075	.	-	0	Parent=FBgn0037760.1.mrna1;Target=FBgn0037760.1 1426 2178 +
Chr2	stalkie_big_nohaplotig	CDS	118487139	118487965	.	-	2	Parent=FBgn0037760.1.mrna1;Target=FBgn0037760.1 599 1425 +
Chr2	stalkie_big_nohaplotig	CDS	118488081	118488134	.	-	2	Parent=FBgn0037760.1.mrna1;Target=FBgn0037760.1 545 598 +
Chr2	stalkie_big_nohaplotig	CDS	118488187	118488633	.	-	2	Parent=FBgn0037760.1.mrna1;Target=FBgn0037760.1 98 544 +
Chr2	stalkie_big_nohaplotig	CDS	118488704	118488800	.	-	0	Parent=FBgn0037760.1.mrna1;Target=FBgn0037760.1 1 97 +
Chr2	gffcl	locus	118496554	118499046	.	-	.	ID=RLOC_00020988;geneIDs=comp161762_c1_seq1.path1;transcripts=comp161762_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118496554	118499046	.	-	.	ID=comp161762_c1_seq1.mrna1;geneID=comp161762_c1_seq1.path1;Name=comp161762_c1_seq1;Dir=indeterminatecoverage=98.4;identity=96.2;matches=2404;mismatches=54;indels=42;unknowns=0;Target=comp161762_c1_seq1 2504 40 .;CDS_Target=comp161762_c1_seq1 581 42 .;locus=RLOC_00020988
Chr2	stalkie_big_nohaplotig	exon	118496554	118499046	96	-	.	Parent=comp161762_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118498505	118499044	.	-	0	Parent=comp161762_c1_seq1.mrna1
Chr2	gffcl	locus	118503402	118506055	.	-	.	ID=RLOC_00020989;geneIDs=FBgn0037549.3.path1;transcripts=FBgn0037549.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118503402	118506055	.	-	.	ID=FBgn0037549.3.mrna1;geneID=FBgn0037549.3.path1;Name=FBgn0037549.3;Dir=sensecoverage=100.0;identity=90.7;matches=1481;mismatches=141;indels=11;unknowns=0;locus=RLOC_00020989
Chr2	stalkie_big_nohaplotig	exon	118503402	118503416	93	-	.	Parent=FBgn0037549.3.mrna1;Target=FBgn0037549.3 1609 1623 +
Chr2	stalkie_big_nohaplotig	exon	118503495	118503635	78	-	.	Parent=FBgn0037549.3.mrna1;Target=FBgn0037549.3 1468 1608 +
Chr2	stalkie_big_nohaplotig	exon	118503701	118504091	79	-	.	Parent=FBgn0037549.3.mrna1;Target=FBgn0037549.3 1077 1467 +
Chr2	stalkie_big_nohaplotig	exon	118504161	118504666	92	-	.	Parent=FBgn0037549.3.mrna1;Target=FBgn0037549.3 580 1076 +
Chr2	stalkie_big_nohaplotig	exon	118504750	118504863	100	-	.	Parent=FBgn0037549.3.mrna1;Target=FBgn0037549.3 466 579 +
Chr2	stalkie_big_nohaplotig	exon	118504936	118505369	99	-	.	Parent=FBgn0037549.3.mrna1;Target=FBgn0037549.3 32 465 +
Chr2	stalkie_big_nohaplotig	exon	118506025	118506055	100	-	.	Parent=FBgn0037549.3.mrna1;Target=FBgn0037549.3 1 31 +
Chr2	stalkie_big_nohaplotig	CDS	118503402	118503416	.	-	0	Parent=FBgn0037549.3.mrna1;Target=FBgn0037549.3 1609 1623 +
Chr2	stalkie_big_nohaplotig	CDS	118503495	118503635	.	-	0	Parent=FBgn0037549.3.mrna1;Target=FBgn0037549.3 1468 1608 +
Chr2	stalkie_big_nohaplotig	CDS	118503701	118504091	.	-	1	Parent=FBgn0037549.3.mrna1;Target=FBgn0037549.3 1077 1467 +
Chr2	stalkie_big_nohaplotig	CDS	118504161	118504666	.	-	0	Parent=FBgn0037549.3.mrna1;Target=FBgn0037549.3 580 1076 +
Chr2	stalkie_big_nohaplotig	CDS	118504750	118504863	.	-	0	Parent=FBgn0037549.3.mrna1;Target=FBgn0037549.3 466 579 +
Chr2	stalkie_big_nohaplotig	CDS	118504936	118505369	.	-	2	Parent=FBgn0037549.3.mrna1;Target=FBgn0037549.3 32 465 +
Chr2	stalkie_big_nohaplotig	CDS	118506025	118506055	.	-	0	Parent=FBgn0037549.3.mrna1;Target=FBgn0037549.3 1 31 +
Chr2	gffcl	locus	118597901	119031576	.	-	.	ID=RLOC_00020990;geneIDs=FBgn0037382.1.path1,comp116557_c0_seq1.path1,comp151649_c5_seq1.path1,comp161121_c1_seq1.path1,comp161555_c0_seq1.path1;transcripts=comp161121_c1_seq1.mrna1,comp161555_c0_seq1.mrna1,comp151649_c5_seq1.mrna1,comp116557_c0_seq1.mrna1,FBgn0037382.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118597901	119031576	.	-	.	ID=comp161121_c1_seq1.mrna1;geneID=comp161121_c1_seq1.path1;Name=comp161121_c1_seq1;Dir=indeterminatecoverage=66.5;identity=90.8;matches=2530;mismatches=134;indels=122;unknowns=0;Target=comp161121_c1_seq1 1164 829 .;locus=RLOC_00020990
Chr2	stalkie_big_nohaplotig	exon	118597901	118597935	39	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 3368 3291 .
Chr2	stalkie_big_nohaplotig	exon	118613367	118613375	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 3290 3282 .
Chr2	stalkie_big_nohaplotig	exon	118635272	118635280	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 3281 3273 .
Chr2	stalkie_big_nohaplotig	exon	118647160	118647164	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 3272 3268 .
Chr2	stalkie_big_nohaplotig	exon	118652582	118652595	61	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 3267 3247 .
Chr2	stalkie_big_nohaplotig	exon	118654034	118654048	93	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 3242 3228 .
Chr2	stalkie_big_nohaplotig	exon	118659176	118659183	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 3227 3220 .
Chr2	stalkie_big_nohaplotig	exon	118665292	118665295	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 3219 3216 .
Chr2	stalkie_big_nohaplotig	exon	118667239	118667245	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 3215 3209 .
Chr2	stalkie_big_nohaplotig	exon	118685810	118685819	90	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 3195 3186 .
Chr2	stalkie_big_nohaplotig	exon	118691424	118691441	83	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 3185 3168 .
Chr2	stalkie_big_nohaplotig	exon	118695997	118696004	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 3167 3160 .
Chr2	stalkie_big_nohaplotig	exon	118698178	118698186	66	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 3159 3151 .
Chr2	stalkie_big_nohaplotig	exon	118700985	118700994	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 3099 3090 .
Chr2	stalkie_big_nohaplotig	exon	118704810	118704818	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 3089 3081 .
Chr2	stalkie_big_nohaplotig	exon	118706646	118706655	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 3065 3056 .
Chr2	stalkie_big_nohaplotig	exon	118709177	118709183	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 3055 3049 .
Chr2	stalkie_big_nohaplotig	exon	118712424	118712497	48	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 3047 2973 .
Chr2	stalkie_big_nohaplotig	exon	118721612	118721619	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2972 2965 .
Chr2	stalkie_big_nohaplotig	exon	118729273	118729309	51	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2964 2924 .
Chr2	stalkie_big_nohaplotig	exon	118756891	118756923	72	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2892 2864 .
Chr2	stalkie_big_nohaplotig	exon	118765099	118765108	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2852 2843 .
Chr2	stalkie_big_nohaplotig	exon	118769328	118769336	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2827 2819 .
Chr2	stalkie_big_nohaplotig	exon	118772362	118772369	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2818 2811 .
Chr2	stalkie_big_nohaplotig	exon	118777764	118777770	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2810 2804 .
Chr2	stalkie_big_nohaplotig	exon	118816679	118816689	72	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2803 2793 .
Chr2	stalkie_big_nohaplotig	exon	118820636	118820641	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2792 2787 .
Chr2	stalkie_big_nohaplotig	exon	118824737	118824745	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2786 2778 .
Chr2	stalkie_big_nohaplotig	exon	118825820	118825821	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2777 2776 .
Chr2	stalkie_big_nohaplotig	exon	118831351	118831357	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2775 2769 .
Chr2	stalkie_big_nohaplotig	exon	118838330	118838375	59	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2768 2722 .
Chr2	stalkie_big_nohaplotig	exon	118860188	118860200	84	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2721 2709 .
Chr2	stalkie_big_nohaplotig	exon	118865522	118865528	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2708 2702 .
Chr2	stalkie_big_nohaplotig	exon	118869386	118869393	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2701 2694 .
Chr2	stalkie_big_nohaplotig	exon	118869659	118869661	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2693 2691 .
Chr2	stalkie_big_nohaplotig	exon	118872731	118872734	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2689 2686 .
Chr2	stalkie_big_nohaplotig	exon	118874499	118874576	75	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2685 2608 .
Chr2	stalkie_big_nohaplotig	exon	118887786	118887792	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2607 2601 .
Chr2	stalkie_big_nohaplotig	exon	118892150	118892158	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2600 2592 .
Chr2	stalkie_big_nohaplotig	exon	118914354	118914425	75	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2591 2520 .
Chr2	stalkie_big_nohaplotig	exon	118927801	118927805	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2519 2515 .
Chr2	stalkie_big_nohaplotig	exon	118927976	118927983	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2514 2507 .
Chr2	stalkie_big_nohaplotig	exon	118932503	118932504	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2506 2505 .
Chr2	stalkie_big_nohaplotig	exon	118934537	118934540	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2504 2501 .
Chr2	stalkie_big_nohaplotig	exon	118941082	118941084	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2500 2498 .
Chr2	stalkie_big_nohaplotig	exon	118947064	118947073	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2495 2486 .
Chr2	stalkie_big_nohaplotig	exon	118947531	118947538	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2485 2478 .
Chr2	stalkie_big_nohaplotig	exon	118953997	118954005	100	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2471 2463 .
Chr2	stalkie_big_nohaplotig	exon	119029594	119031576	97	-	.	Parent=comp161121_c1_seq1.mrna1;Target=comp161121_c1_seq1 2459 461 .
Chr2	stalkie_big_nohaplotig	CDS	119030888	119031222	.	-	0	Parent=comp161121_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118664715	118666542	.	-	.	ID=comp161555_c0_seq1.mrna1;geneID=comp161555_c0_seq1.path1;Name=comp161555_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.8;matches=1751;mismatches=40;indels=96;unknowns=0;Target=comp161555_c0_seq1 1850 1 .;CDS_Target=comp161555_c0_seq1 709 578 .;locus=RLOC_00020990
Chr2	stalkie_big_nohaplotig	exon	118664715	118666542	92	-	.	Parent=comp161555_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118665799	118665930	.	-	0	Parent=comp161555_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118667078	118687545	.	-	.	ID=comp151649_c5_seq1.mrna1;geneID=comp151649_c5_seq1.path1;Name=comp151649_c5_seq1;Dir=antisensecoverage=99.5;identity=99.9;matches=1741;mismatches=2;indels=0;unknowns=0;locus=RLOC_00020990
Chr2	stalkie_big_nohaplotig	exon	118667078	118667316	100	-	.	Parent=comp151649_c5_seq1.mrna1;Target=comp151649_c5_seq1 1 239 -
Chr2	stalkie_big_nohaplotig	exon	118671359	118671512	100	-	.	Parent=comp151649_c5_seq1.mrna1;Target=comp151649_c5_seq1 240 393 -
Chr2	stalkie_big_nohaplotig	exon	118671701	118671883	100	-	.	Parent=comp151649_c5_seq1.mrna1;Target=comp151649_c5_seq1 394 576 -
Chr2	stalkie_big_nohaplotig	exon	118672081	118672217	100	-	.	Parent=comp151649_c5_seq1.mrna1;Target=comp151649_c5_seq1 577 713 -
Chr2	stalkie_big_nohaplotig	exon	118679576	118679747	100	-	.	Parent=comp151649_c5_seq1.mrna1;Target=comp151649_c5_seq1 714 885 -
Chr2	stalkie_big_nohaplotig	exon	118679891	118680088	100	-	.	Parent=comp151649_c5_seq1.mrna1;Target=comp151649_c5_seq1 886 1083 -
Chr2	stalkie_big_nohaplotig	exon	118686886	118687545	99	-	.	Parent=comp151649_c5_seq1.mrna1;Target=comp151649_c5_seq1 1084 1743 -
Chr2	stalkie_big_nohaplotig	CDS	118667152	118667316	.	-	0	Parent=comp151649_c5_seq1.mrna1;Target=comp151649_c5_seq1 75 239 .
Chr2	stalkie_big_nohaplotig	CDS	118671359	118671512	.	-	1	Parent=comp151649_c5_seq1.mrna1;Target=comp151649_c5_seq1 240 393 .
Chr2	stalkie_big_nohaplotig	CDS	118671701	118671883	.	-	1	Parent=comp151649_c5_seq1.mrna1;Target=comp151649_c5_seq1 394 576 .
Chr2	stalkie_big_nohaplotig	CDS	118672081	118672217	.	-	0	Parent=comp151649_c5_seq1.mrna1;Target=comp151649_c5_seq1 577 713 .
Chr2	stalkie_big_nohaplotig	CDS	118679576	118679747	.	-	1	Parent=comp151649_c5_seq1.mrna1;Target=comp151649_c5_seq1 714 885 .
Chr2	stalkie_big_nohaplotig	CDS	118679891	118680088	.	-	1	Parent=comp151649_c5_seq1.mrna1;Target=comp151649_c5_seq1 886 1083 .
Chr2	stalkie_big_nohaplotig	CDS	118686886	118687433	.	-	0	Parent=comp151649_c5_seq1.mrna1;Target=comp151649_c5_seq1 1084 1631 .
Chr2	stalkie_big_nohaplotig	mRNA	118838176	118838534	.	-	.	ID=comp116557_c0_seq1.mrna1;geneID=comp116557_c0_seq1.path1;Name=comp116557_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.1;matches=352;mismatches=7;indels=0;unknowns=0;Target=comp116557_c0_seq1 360 2 .;CDS_Target=comp116557_c0_seq1 320 270 .;locus=RLOC_00020990
Chr2	stalkie_big_nohaplotig	exon	118838176	118838534	98	-	.	Parent=comp116557_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118838216	118838266	.	-	0	Parent=comp116557_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118930178	118932708	.	-	.	ID=FBgn0037382.1.mrna1;geneID=FBgn0037382.1.path1;Name=FBgn0037382.1;Dir=sensecoverage=100.0;identity=100.0;matches=2241;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020990
Chr2	stalkie_big_nohaplotig	exon	118930178	118930922	100	-	.	Parent=FBgn0037382.1.mrna1;Target=FBgn0037382.1 1497 2241 +
Chr2	stalkie_big_nohaplotig	exon	118930988	118931386	100	-	.	Parent=FBgn0037382.1.mrna1;Target=FBgn0037382.1 1098 1496 +
Chr2	stalkie_big_nohaplotig	exon	118931494	118931798	100	-	.	Parent=FBgn0037382.1.mrna1;Target=FBgn0037382.1 793 1097 +
Chr2	stalkie_big_nohaplotig	exon	118931855	118932526	100	-	.	Parent=FBgn0037382.1.mrna1;Target=FBgn0037382.1 121 792 +
Chr2	stalkie_big_nohaplotig	exon	118932589	118932708	100	-	.	Parent=FBgn0037382.1.mrna1;Target=FBgn0037382.1 1 120 +
Chr2	stalkie_big_nohaplotig	CDS	118930178	118930922	.	-	1	Parent=FBgn0037382.1.mrna1;Target=FBgn0037382.1 1497 2241 +
Chr2	stalkie_big_nohaplotig	CDS	118930988	118931386	.	-	1	Parent=FBgn0037382.1.mrna1;Target=FBgn0037382.1 1098 1496 +
Chr2	stalkie_big_nohaplotig	CDS	118931494	118931798	.	-	0	Parent=FBgn0037382.1.mrna1;Target=FBgn0037382.1 793 1097 +
Chr2	stalkie_big_nohaplotig	CDS	118931855	118932526	.	-	0	Parent=FBgn0037382.1.mrna1;Target=FBgn0037382.1 121 792 +
Chr2	stalkie_big_nohaplotig	CDS	118932589	118932708	.	-	0	Parent=FBgn0037382.1.mrna1;Target=FBgn0037382.1 1 120 +
Chr2	gffcl	locus	118610733	118611170	.	-	.	ID=RLOC_00020991;geneIDs=comp134688_c0_seq1.path1;transcripts=comp134688_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118610733	118611170	.	-	.	ID=comp134688_c0_seq1.mrna1;geneID=comp134688_c0_seq1.path1;Name=comp134688_c0_seq1;Dir=antisensecoverage=99.7;identity=95.7;matches=375;mismatches=2;indels=15;unknowns=0;locus=RLOC_00020991
Chr2	stalkie_big_nohaplotig	exon	118610733	118610994	93	-	.	Parent=comp134688_c0_seq1.mrna1;Target=comp134688_c0_seq1 2 278 -
Chr2	stalkie_big_nohaplotig	exon	118611056	118611170	100	-	.	Parent=comp134688_c0_seq1.mrna1;Target=comp134688_c0_seq1 279 393 -
Chr2	stalkie_big_nohaplotig	CDS	118610893	118610994	.	-	0	Parent=comp134688_c0_seq1.mrna1;Target=comp134688_c0_seq1 177 278 .
Chr2	stalkie_big_nohaplotig	CDS	118611056	118611169	.	-	0	Parent=comp134688_c0_seq1.mrna1;Target=comp134688_c0_seq1 279 392 .
Chr2	gffcl	locus	118628426	118631879	.	-	.	ID=RLOC_00020992;geneIDs=ORF1351.path1;transcripts=ORF1351.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118628426	118631879	.	-	.	ID=ORF1351.mrna1;geneID=ORF1351.path1;Name=ORF1351;Dir=sensecoverage=100.0;identity=98.5;matches=1114;mismatches=8;indels=9;unknowns=0;locus=RLOC_00020992
Chr2	stalkie_big_nohaplotig	exon	118628426	118628737	94	-	.	Parent=ORF1351.mrna1;Target=ORF1351 811 1131 +
Chr2	stalkie_big_nohaplotig	exon	118631011	118631315	100	-	.	Parent=ORF1351.mrna1;Target=ORF1351 506 810 +
Chr2	stalkie_big_nohaplotig	exon	118631375	118631879	100	-	.	Parent=ORF1351.mrna1;Target=ORF1351 1 505 +
Chr2	stalkie_big_nohaplotig	CDS	118628426	118628737	.	-	0	Parent=ORF1351.mrna1;Target=ORF1351 811 1131 +
Chr2	stalkie_big_nohaplotig	CDS	118631011	118631315	.	-	2	Parent=ORF1351.mrna1;Target=ORF1351 506 810 +
Chr2	stalkie_big_nohaplotig	CDS	118631375	118631879	.	-	0	Parent=ORF1351.mrna1;Target=ORF1351 1 505 +
Chr2	gffcl	locus	118636425	118641378	.	+	.	ID=RLOC_00020993;geneIDs=FBgn0030551.1.path1;transcripts=FBgn0030551.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118636425	118641378	.	+	.	ID=FBgn0030551.1.mrna1;geneID=FBgn0030551.1.path1;Name=FBgn0030551.1;Dir=sensecoverage=100.0;identity=100.0;matches=1044;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020993
Chr2	stalkie_big_nohaplotig	exon	118636425	118636521	100	+	.	Parent=FBgn0030551.1.mrna1;Target=FBgn0030551.1 1 97 +
Chr2	stalkie_big_nohaplotig	exon	118636582	118636715	100	+	.	Parent=FBgn0030551.1.mrna1;Target=FBgn0030551.1 98 231 +
Chr2	stalkie_big_nohaplotig	exon	118636780	118636915	100	+	.	Parent=FBgn0030551.1.mrna1;Target=FBgn0030551.1 232 367 +
Chr2	stalkie_big_nohaplotig	exon	118636976	118637119	100	+	.	Parent=FBgn0030551.1.mrna1;Target=FBgn0030551.1 368 511 +
Chr2	stalkie_big_nohaplotig	exon	118640785	118641084	100	+	.	Parent=FBgn0030551.1.mrna1;Target=FBgn0030551.1 512 811 +
Chr2	stalkie_big_nohaplotig	exon	118641146	118641378	100	+	.	Parent=FBgn0030551.1.mrna1;Target=FBgn0030551.1 812 1044 +
Chr2	stalkie_big_nohaplotig	CDS	118636425	118636521	.	+	0	Parent=FBgn0030551.1.mrna1;Target=FBgn0030551.1 1 97 +
Chr2	stalkie_big_nohaplotig	CDS	118636582	118636715	.	+	2	Parent=FBgn0030551.1.mrna1;Target=FBgn0030551.1 98 231 +
Chr2	stalkie_big_nohaplotig	CDS	118636780	118636915	.	+	0	Parent=FBgn0030551.1.mrna1;Target=FBgn0030551.1 232 367 +
Chr2	stalkie_big_nohaplotig	CDS	118636976	118637119	.	+	2	Parent=FBgn0030551.1.mrna1;Target=FBgn0030551.1 368 511 +
Chr2	stalkie_big_nohaplotig	CDS	118640785	118641084	.	+	2	Parent=FBgn0030551.1.mrna1;Target=FBgn0030551.1 512 811 +
Chr2	stalkie_big_nohaplotig	CDS	118641146	118641378	.	+	2	Parent=FBgn0030551.1.mrna1;Target=FBgn0030551.1 812 1044 +
Chr2	gffcl	locus	118642343	118644660	.	-	.	ID=RLOC_00020994;geneIDs=FBgn0005671.1.path1;transcripts=FBgn0005671.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118642343	118644660	.	-	.	ID=FBgn0005671.1.mrna1;geneID=FBgn0005671.1.path1;Name=FBgn0005671.1;Dir=sensecoverage=100.0;identity=100.0;matches=1488;mismatches=0;indels=0;unknowns=0;locus=RLOC_00020994
Chr2	stalkie_big_nohaplotig	exon	118642343	118642477	100	-	.	Parent=FBgn0005671.1.mrna1;Target=FBgn0005671.1 1354 1488 +
Chr2	stalkie_big_nohaplotig	exon	118642555	118643310	100	-	.	Parent=FBgn0005671.1.mrna1;Target=FBgn0005671.1 598 1353 +
Chr2	stalkie_big_nohaplotig	exon	118643376	118643881	100	-	.	Parent=FBgn0005671.1.mrna1;Target=FBgn0005671.1 92 597 +
Chr2	stalkie_big_nohaplotig	exon	118644570	118644660	100	-	.	Parent=FBgn0005671.1.mrna1;Target=FBgn0005671.1 1 91 +
Chr2	stalkie_big_nohaplotig	CDS	118642343	118642477	.	-	0	Parent=FBgn0005671.1.mrna1;Target=FBgn0005671.1 1354 1488 +
Chr2	stalkie_big_nohaplotig	CDS	118642555	118643310	.	-	0	Parent=FBgn0005671.1.mrna1;Target=FBgn0005671.1 598 1353 +
Chr2	stalkie_big_nohaplotig	CDS	118643376	118643881	.	-	2	Parent=FBgn0005671.1.mrna1;Target=FBgn0005671.1 92 597 +
Chr2	stalkie_big_nohaplotig	CDS	118644570	118644660	.	-	0	Parent=FBgn0005671.1.mrna1;Target=FBgn0005671.1 1 91 +
Chr2	gffcl	locus	118647412	118648790	.	-	.	ID=RLOC_00020995;geneIDs=comp156185_c0_seq1.path1;transcripts=comp156185_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118647412	118648790	.	-	.	ID=comp156185_c0_seq1.mrna1;geneID=comp156185_c0_seq1.path1;Name=comp156185_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1377;mismatches=2;indels=5;unknowns=0;Target=comp156185_c0_seq1 1384 1 .;CDS_Target=comp156185_c0_seq1 944 747 .;locus=RLOC_00020995
Chr2	stalkie_big_nohaplotig	exon	118647412	118648790	99	-	.	Parent=comp156185_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118647850	118648046	.	-	0	Parent=comp156185_c0_seq1.mrna1
Chr2	gffcl	locus	118649125	118663656	.	+	.	ID=RLOC_00020996;geneIDs=FBgn0038981.1.path1;transcripts=FBgn0038981.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118649125	118663656	.	+	.	ID=FBgn0038981.1.mrna1;geneID=FBgn0038981.1.path1;Name=FBgn0038981.1;Dir=sensecoverage=100.0;identity=99.6;matches=1228;mismatches=3;indels=2;unknowns=0;Target=FBgn0038981.1 2 34 +;locus=RLOC_00020996
Chr2	stalkie_big_nohaplotig	exon	118649125	118649237	95	+	.	Parent=FBgn0038981.1.mrna1;Target=FBgn0038981.1 1 115 +
Chr2	stalkie_big_nohaplotig	exon	118661309	118661424	100	+	.	Parent=FBgn0038981.1.mrna1;Target=FBgn0038981.1 116 231 +
Chr2	stalkie_big_nohaplotig	exon	118661497	118662255	100	+	.	Parent=FBgn0038981.1.mrna1;Target=FBgn0038981.1 232 990 +
Chr2	stalkie_big_nohaplotig	exon	118662331	118662409	100	+	.	Parent=FBgn0038981.1.mrna1;Target=FBgn0038981.1 991 1069 +
Chr2	stalkie_big_nohaplotig	exon	118663379	118663481	100	+	.	Parent=FBgn0038981.1.mrna1;Target=FBgn0038981.1 1070 1172 +
Chr2	stalkie_big_nohaplotig	exon	118663596	118663656	100	+	.	Parent=FBgn0038981.1.mrna1;Target=FBgn0038981.1 1173 1233 +
Chr2	stalkie_big_nohaplotig	CDS	118649126	118649156	.	+	0	Parent=FBgn0038981.1.mrna1
Chr2	gffcl	locus	118702198	118702401	.	-	.	ID=RLOC_00020997;geneIDs=comp514553_c0_seq1.path1;transcripts=comp514553_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118702198	118702401	.	-	.	ID=comp514553_c0_seq1.mrna1;geneID=comp514553_c0_seq1.path1;Name=comp514553_c0_seq1;Dir=indeterminatecoverage=79.7;identity=96.6;matches=197;mismatches=7;indels=0;unknowns=0;Target=comp514553_c0_seq1 256 53 .;CDS_Target=comp514553_c0_seq1 78 55 .;locus=RLOC_00020997
Chr2	stalkie_big_nohaplotig	exon	118702198	118702401	96	-	.	Parent=comp514553_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118702376	118702399	.	-	0	Parent=comp514553_c0_seq1.mrna1
Chr2	gffcl	locus	118753506	118839577	.	.	.	ID=RLOC_00020998;geneIDs=comp146612_c0_seq1.path1,comp154136_c0_seq1.path1;transcripts=comp154136_c0_seq1.mrna1,comp146612_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118753506	118839577	.	-	.	ID=comp154136_c0_seq1.mrna1;geneID=comp154136_c0_seq1.path1;Name=comp154136_c0_seq1;Dir=indeterminatecoverage=91.5;identity=94.8;matches=669;mismatches=5;indels=32;unknowns=0;Target=comp154136_c0_seq1 338 276 .;locus=RLOC_00020998
Chr2	stalkie_big_nohaplotig	exon	118753506	118753510	100	-	.	Parent=comp154136_c0_seq1.mrna1;Target=comp154136_c0_seq1 734 730 .
Chr2	stalkie_big_nohaplotig	exon	118768353	118768360	100	-	.	Parent=comp154136_c0_seq1.mrna1;Target=comp154136_c0_seq1 729 722 .
Chr2	stalkie_big_nohaplotig	exon	118784578	118784580	100	-	.	Parent=comp154136_c0_seq1.mrna1;Target=comp154136_c0_seq1 721 719 .
Chr2	stalkie_big_nohaplotig	exon	118789786	118789789	100	-	.	Parent=comp154136_c0_seq1.mrna1;Target=comp154136_c0_seq1 718 715 .
Chr2	stalkie_big_nohaplotig	exon	118795693	118795696	100	-	.	Parent=comp154136_c0_seq1.mrna1;Target=comp154136_c0_seq1 714 711 .
Chr2	stalkie_big_nohaplotig	exon	118811644	118811645	100	-	.	Parent=comp154136_c0_seq1.mrna1;Target=comp154136_c0_seq1 710 709 .
Chr2	stalkie_big_nohaplotig	exon	118814045	118814046	100	-	.	Parent=comp154136_c0_seq1.mrna1;Target=comp154136_c0_seq1 708 707 .
Chr2	stalkie_big_nohaplotig	exon	118821435	118821437	100	-	.	Parent=comp154136_c0_seq1.mrna1;Target=comp154136_c0_seq1 706 704 .
Chr2	stalkie_big_nohaplotig	exon	118826658	118826659	100	-	.	Parent=comp154136_c0_seq1.mrna1;Target=comp154136_c0_seq1 703 702 .
Chr2	stalkie_big_nohaplotig	exon	118834180	118834183	100	-	.	Parent=comp154136_c0_seq1.mrna1;Target=comp154136_c0_seq1 701 698 .
Chr2	stalkie_big_nohaplotig	exon	118835002	118835003	100	-	.	Parent=comp154136_c0_seq1.mrna1;Target=comp154136_c0_seq1 697 696 .
Chr2	stalkie_big_nohaplotig	exon	118838943	118839577	94	-	.	Parent=comp154136_c0_seq1.mrna1;Target=comp154136_c0_seq1 695 29 .
Chr2	stalkie_big_nohaplotig	CDS	118839283	118839331	.	-	0	Parent=comp154136_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118826196	118826676	.	+	.	ID=comp146612_c0_seq1.mrna1;geneID=comp146612_c0_seq1.path1;Name=comp146612_c0_seq1;Dir=indeterminatecoverage=98.2;identity=97.9;matches=471;mismatches=10;indels=0;unknowns=0;Target=comp146612_c0_seq1 481 1 .;CDS_Target=comp146612_c0_seq1 69 1 .;locus=RLOC_00020998
Chr2	stalkie_big_nohaplotig	exon	118826196	118826676	97	+	.	Parent=comp146612_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118826196	118826264	.	+	0	Parent=comp146612_c0_seq1.mrna1
Chr2	gffcl	locus	118756191	118781805	.	.	.	ID=RLOC_00020999;geneIDs=FBgn0038975.1.path1,comp143361_c1_seq1.path1;transcripts=FBgn0038975.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118756701	118781805	.	+	.	ID=FBgn0038975.1.mrna1;geneID=FBgn0038975.1.path1;Name=FBgn0038975.1;Dir=sensecoverage=100.0;identity=99.7;matches=5251;mismatches=17;indels=0;unknowns=0;locus=RLOC_00020999
Chr2	stalkie_big_nohaplotig	exon	118756701	118757078	100	+	.	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 1 378 +
Chr2	stalkie_big_nohaplotig	exon	118759637	118759770	98	+	.	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 379 512 +
Chr2	stalkie_big_nohaplotig	exon	118759846	118759990	100	+	.	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 513 657 +
Chr2	stalkie_big_nohaplotig	exon	118760059	118760115	98	+	.	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 658 714 +
Chr2	stalkie_big_nohaplotig	exon	118761935	118762073	99	+	.	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 715 853 +
Chr2	stalkie_big_nohaplotig	exon	118762137	118762286	100	+	.	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 854 1003 +
Chr2	stalkie_big_nohaplotig	exon	118762352	118762539	100	+	.	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 1004 1191 +
Chr2	stalkie_big_nohaplotig	exon	118762604	118762762	100	+	.	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 1192 1350 +
Chr2	stalkie_big_nohaplotig	exon	118762836	118762988	100	+	.	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 1351 1503 +
Chr2	stalkie_big_nohaplotig	exon	118763475	118763591	100	+	.	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 1504 1620 +
Chr2	stalkie_big_nohaplotig	exon	118763656	118764040	99	+	.	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 1621 2005 +
Chr2	stalkie_big_nohaplotig	exon	118764762	118765132	100	+	.	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 2006 2376 +
Chr2	stalkie_big_nohaplotig	exon	118765192	118765312	100	+	.	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 2377 2497 +
Chr2	stalkie_big_nohaplotig	exon	118773000	118773147	99	+	.	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 2498 2645 +
Chr2	stalkie_big_nohaplotig	exon	118773222	118773979	99	+	.	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 2646 3403 +
Chr2	stalkie_big_nohaplotig	exon	118774100	118774450	99	+	.	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 3404 3754 +
Chr2	stalkie_big_nohaplotig	exon	118774517	118774752	100	+	.	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 3755 3990 +
Chr2	stalkie_big_nohaplotig	exon	118777831	118778134	99	+	.	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 3991 4294 +
Chr2	stalkie_big_nohaplotig	exon	118780832	118781805	99	+	.	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 4295 5268 +
Chr2	stalkie_big_nohaplotig	CDS	118756701	118757078	.	+	0	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 1 378 +
Chr2	stalkie_big_nohaplotig	CDS	118759637	118759770	.	+	0	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 379 512 +
Chr2	stalkie_big_nohaplotig	CDS	118759846	118759990	.	+	1	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 513 657 +
Chr2	stalkie_big_nohaplotig	CDS	118760059	118760115	.	+	0	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 658 714 +
Chr2	stalkie_big_nohaplotig	CDS	118761935	118762073	.	+	0	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 715 853 +
Chr2	stalkie_big_nohaplotig	CDS	118762137	118762286	.	+	2	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 854 1003 +
Chr2	stalkie_big_nohaplotig	CDS	118762352	118762539	.	+	2	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 1004 1191 +
Chr2	stalkie_big_nohaplotig	CDS	118762604	118762762	.	+	0	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 1192 1350 +
Chr2	stalkie_big_nohaplotig	CDS	118762836	118762988	.	+	0	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 1351 1503 +
Chr2	stalkie_big_nohaplotig	CDS	118763475	118763591	.	+	0	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 1504 1620 +
Chr2	stalkie_big_nohaplotig	CDS	118763656	118764040	.	+	0	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 1621 2005 +
Chr2	stalkie_big_nohaplotig	CDS	118764762	118765132	.	+	2	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 2006 2376 +
Chr2	stalkie_big_nohaplotig	CDS	118765192	118765312	.	+	0	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 2377 2497 +
Chr2	stalkie_big_nohaplotig	CDS	118773000	118773147	.	+	2	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 2498 2645 +
Chr2	stalkie_big_nohaplotig	CDS	118773222	118773979	.	+	1	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 2646 3403 +
Chr2	stalkie_big_nohaplotig	CDS	118774100	118774450	.	+	2	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 3404 3754 +
Chr2	stalkie_big_nohaplotig	CDS	118774517	118774752	.	+	2	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 3755 3990 +
Chr2	stalkie_big_nohaplotig	CDS	118777831	118778134	.	+	0	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 3991 4294 +
Chr2	stalkie_big_nohaplotig	CDS	118780832	118781805	.	+	2	Parent=FBgn0038975.1.mrna1;Target=FBgn0038975.1 4295 5268 +
Chr2	gffcl	locus	118785983	118786337	.	+	.	ID=RLOC_00021000;geneIDs=comp151763_c0_seq1.path1;transcripts=comp151763_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118785983	118786337	.	+	.	ID=comp151763_c0_seq1.mrna1;geneID=comp151763_c0_seq1.path1;Name=comp151763_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.7;matches=354;mismatches=1;indels=0;unknowns=0;Target=comp151763_c0_seq1 356 2 .;CDS_Target=comp151763_c0_seq1 194 3 .;locus=RLOC_00021000
Chr2	stalkie_big_nohaplotig	exon	118785983	118786337	99	+	.	Parent=comp151763_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118785984	118786175	.	+	0	Parent=comp151763_c0_seq1.mrna1
Chr2	gffcl	locus	118786375	118787197	.	.	.	ID=RLOC_00021001;geneIDs=comp117652_c0_seq1.path1,comp134789_c0_seq1.path1,comp140574_c0_seq1.path1;transcripts=comp134789_c0_seq1.mrna1,comp140574_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118786375	118786813	.	-	.	ID=comp134789_c0_seq1.mrna1;geneID=comp134789_c0_seq1.path1;Name=comp134789_c0_seq1;Dir=indeterminatecoverage=91.6;identity=100.0;matches=439;mismatches=0;indels=0;unknowns=0;Target=comp134789_c0_seq1 462 24 .;CDS_Target=comp134789_c0_seq1 190 71 .;locus=RLOC_00021001
Chr2	stalkie_big_nohaplotig	exon	118786375	118786813	100	-	.	Parent=comp134789_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118786647	118786766	.	-	0	Parent=comp134789_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118786995	118787197	.	+	.	ID=comp140574_c0_seq1.mrna1;geneID=comp140574_c0_seq1.path1;Name=comp140574_c0_seq1;Dir=indeterminatecoverage=96.2;identity=100.0;matches=203;mismatches=0;indels=0;unknowns=0;Target=comp140574_c0_seq1 211 9 .;CDS_Target=comp140574_c0_seq1 132 58 .;locus=RLOC_00021001
Chr2	stalkie_big_nohaplotig	exon	118786995	118787197	100	+	.	Parent=comp140574_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118787044	118787118	.	+	0	Parent=comp140574_c0_seq1.mrna1
Chr2	gffcl	locus	118789435	118790668	.	+	.	ID=RLOC_00021002;geneIDs=FBgn0263200.1.path1;transcripts=FBgn0263200.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118789435	118790668	.	+	.	ID=FBgn0263200.1.mrna1;geneID=FBgn0263200.1.path1;Name=FBgn0263200.1;Dir=sensecoverage=100.0;identity=100.0;matches=1056;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021002
Chr2	stalkie_big_nohaplotig	exon	118789435	118789465	100	+	.	Parent=FBgn0263200.1.mrna1;Target=FBgn0263200.1 1 31 +
Chr2	stalkie_big_nohaplotig	exon	118789524	118789693	100	+	.	Parent=FBgn0263200.1.mrna1;Target=FBgn0263200.1 32 201 +
Chr2	stalkie_big_nohaplotig	exon	118789752	118789957	100	+	.	Parent=FBgn0263200.1.mrna1;Target=FBgn0263200.1 202 407 +
Chr2	stalkie_big_nohaplotig	exon	118790020	118790668	100	+	.	Parent=FBgn0263200.1.mrna1;Target=FBgn0263200.1 408 1056 +
Chr2	stalkie_big_nohaplotig	CDS	118789435	118789465	.	+	0	Parent=FBgn0263200.1.mrna1;Target=FBgn0263200.1 1 31 +
Chr2	stalkie_big_nohaplotig	CDS	118789524	118789693	.	+	2	Parent=FBgn0263200.1.mrna1;Target=FBgn0263200.1 32 201 +
Chr2	stalkie_big_nohaplotig	CDS	118789752	118789957	.	+	0	Parent=FBgn0263200.1.mrna1;Target=FBgn0263200.1 202 407 +
Chr2	stalkie_big_nohaplotig	CDS	118790020	118790668	.	+	1	Parent=FBgn0263200.1.mrna1;Target=FBgn0263200.1 408 1056 +
Chr2	gffcl	locus	118791278	118791956	.	-	.	ID=RLOC_00021003;geneIDs=FBgn0067622.1.path1;transcripts=FBgn0067622.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118791278	118791956	.	-	.	ID=FBgn0067622.1.mrna1;geneID=FBgn0067622.1.path1;Name=FBgn0067622.1;Dir=sensecoverage=100.0;identity=100.0;matches=621;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021003
Chr2	stalkie_big_nohaplotig	exon	118791278	118791446	100	-	.	Parent=FBgn0067622.1.mrna1;Target=FBgn0067622.1 453 621 +
Chr2	stalkie_big_nohaplotig	exon	118791505	118791956	100	-	.	Parent=FBgn0067622.1.mrna1;Target=FBgn0067622.1 1 452 +
Chr2	stalkie_big_nohaplotig	CDS	118791278	118791446	.	-	1	Parent=FBgn0067622.1.mrna1;Target=FBgn0067622.1 453 621 +
Chr2	stalkie_big_nohaplotig	CDS	118791505	118791956	.	-	0	Parent=FBgn0067622.1.mrna1;Target=FBgn0067622.1 1 452 +
Chr2	gffcl	locus	118795026	118834985	.	.	.	ID=RLOC_00021004;geneIDs=FBgn0262742.1.path1,comp118783_c0_seq1.path1,comp151729_c0_seq1.path1;transcripts=FBgn0262742.1.mrna1,comp118783_c0_seq1.mrna1,comp151729_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118795026	118834985	.	+	.	ID=FBgn0262742.1.mrna1;geneID=FBgn0262742.1.path1;Name=FBgn0262742.1;Dir=sensecoverage=100.0;identity=100.0;matches=2040;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021004
Chr2	stalkie_big_nohaplotig	exon	118795026	118795205	100	+	.	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 1 180 +
Chr2	stalkie_big_nohaplotig	exon	118821821	118821950	100	+	.	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 181 310 +
Chr2	stalkie_big_nohaplotig	exon	118822083	118822252	100	+	.	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 311 480 +
Chr2	stalkie_big_nohaplotig	exon	118822357	118822490	100	+	.	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 481 614 +
Chr2	stalkie_big_nohaplotig	exon	118822558	118822654	100	+	.	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 615 711 +
Chr2	stalkie_big_nohaplotig	exon	118822812	118822977	100	+	.	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 712 877 +
Chr2	stalkie_big_nohaplotig	exon	118824131	118824291	100	+	.	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 878 1038 +
Chr2	stalkie_big_nohaplotig	exon	118827553	118827561	100	+	.	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 1039 1047 +
Chr2	stalkie_big_nohaplotig	exon	118830918	118830926	100	+	.	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 1048 1056 +
Chr2	stalkie_big_nohaplotig	exon	118831529	118831680	100	+	.	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 1057 1208 +
Chr2	stalkie_big_nohaplotig	exon	118832322	118832412	100	+	.	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 1209 1299 +
Chr2	stalkie_big_nohaplotig	exon	118832479	118832699	100	+	.	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 1300 1520 +
Chr2	stalkie_big_nohaplotig	exon	118832996	118833158	100	+	.	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 1521 1683 +
Chr2	stalkie_big_nohaplotig	exon	118833230	118833377	100	+	.	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 1684 1831 +
Chr2	stalkie_big_nohaplotig	exon	118834777	118834985	100	+	.	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 1832 2040 +
Chr2	stalkie_big_nohaplotig	CDS	118795026	118795205	.	+	0	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 1 180 +
Chr2	stalkie_big_nohaplotig	CDS	118821821	118821950	.	+	0	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 181 310 +
Chr2	stalkie_big_nohaplotig	CDS	118822083	118822252	.	+	2	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 311 480 +
Chr2	stalkie_big_nohaplotig	CDS	118822357	118822490	.	+	0	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 481 614 +
Chr2	stalkie_big_nohaplotig	CDS	118822558	118822654	.	+	1	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 615 711 +
Chr2	stalkie_big_nohaplotig	CDS	118822812	118822977	.	+	0	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 712 877 +
Chr2	stalkie_big_nohaplotig	CDS	118824131	118824291	.	+	2	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 878 1038 +
Chr2	stalkie_big_nohaplotig	CDS	118827553	118827561	.	+	0	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 1039 1047 +
Chr2	stalkie_big_nohaplotig	CDS	118830918	118830926	.	+	0	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 1048 1056 +
Chr2	stalkie_big_nohaplotig	CDS	118831529	118831680	.	+	0	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 1057 1208 +
Chr2	stalkie_big_nohaplotig	CDS	118832322	118832412	.	+	1	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 1209 1299 +
Chr2	stalkie_big_nohaplotig	CDS	118832479	118832699	.	+	0	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 1300 1520 +
Chr2	stalkie_big_nohaplotig	CDS	118832996	118833158	.	+	1	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 1521 1683 +
Chr2	stalkie_big_nohaplotig	CDS	118833230	118833377	.	+	0	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 1684 1831 +
Chr2	stalkie_big_nohaplotig	CDS	118834777	118834985	.	+	2	Parent=FBgn0262742.1.mrna1;Target=FBgn0262742.1 1832 2040 +
Chr2	stalkie_big_nohaplotig	mRNA	118824269	118824528	.	-	.	ID=comp118783_c0_seq1.mrna1;geneID=comp118783_c0_seq1.path1;Name=comp118783_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.9;matches=258;mismatches=2;indels=1;unknowns=0;Target=comp118783_c0_seq1 262 2 .;CDS_Target=comp118783_c0_seq1 98 3 .;locus=RLOC_00021004
Chr2	stalkie_big_nohaplotig	exon	118824269	118824528	98	-	.	Parent=comp118783_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118824432	118824527	.	-	0	Parent=comp118783_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118829677	118831017	.	+	.	ID=comp151729_c0_seq1.mrna1;geneID=comp151729_c0_seq1.path1;Name=comp151729_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1339;mismatches=2;indels=0;unknowns=0;Target=comp151729_c0_seq1 1341 1 .;CDS_Target=comp151729_c0_seq1 628 524 .;locus=RLOC_00021004
Chr2	stalkie_big_nohaplotig	exon	118829677	118831017	99	+	.	Parent=comp151729_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118830200	118830304	.	+	0	Parent=comp151729_c0_seq1.mrna1
Chr2	gffcl	locus	118807685	118807803	.	-	.	ID=RLOC_00021005;geneIDs=comp162860_c0_seq1.path1;transcripts=comp162860_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118807685	118807803	.	-	.	ID=comp162860_c0_seq1.mrna1;geneID=comp162860_c0_seq1.path1;Name=comp162860_c0_seq1;Dir=indeterminatecoverage=10.7;identity=100.0;matches=119;mismatches=0;indels=0;unknowns=0;Target=comp162860_c0_seq1 119 1 .;CDS_Target=comp162860_c0_seq1 119 2 .;locus=RLOC_00021005
Chr2	stalkie_big_nohaplotig	exon	118807685	118807803	100	-	.	Parent=comp162860_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118807685	118807802	.	-	0	Parent=comp162860_c0_seq1.mrna1
Chr2	gffcl	locus	118836910	118837925	.	.	.	ID=RLOC_00021006;geneIDs=comp136054_c0_seq1.path1,comp154570_c0_seq1.path1;transcripts=comp154570_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118836910	118837686	.	-	.	ID=comp154570_c0_seq1.mrna1;geneID=comp154570_c0_seq1.path1;Name=comp154570_c0_seq1;Dir=indeterminatecoverage=99.6;identity=96.9;matches=769;mismatches=8;indels=17;unknowns=0;Target=comp154570_c0_seq1 797 4 .;CDS_Target=comp154570_c0_seq1 10 5 .;locus=RLOC_00021006
Chr2	stalkie_big_nohaplotig	exon	118836910	118837686	96	-	.	Parent=comp154570_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118837680	118837685	.	-	0	Parent=comp154570_c0_seq1.mrna1
Chr2	gffcl	locus	118845939	118850489	.	+	.	ID=RLOC_00021007;geneIDs=FBgn0037379.1.path1;transcripts=FBgn0037379.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118845939	118850489	.	+	.	ID=FBgn0037379.1.mrna1;geneID=FBgn0037379.1.path1;Name=FBgn0037379.1;Dir=sensecoverage=100.0;identity=99.8;matches=3657;mismatches=0;indels=9;unknowns=0;locus=RLOC_00021007
Chr2	stalkie_big_nohaplotig	exon	118845939	118846196	100	+	.	Parent=FBgn0037379.1.mrna1;Target=FBgn0037379.1 1 258 +
Chr2	stalkie_big_nohaplotig	exon	118846267	118846410	100	+	.	Parent=FBgn0037379.1.mrna1;Target=FBgn0037379.1 259 402 +
Chr2	stalkie_big_nohaplotig	exon	118847074	118847467	100	+	.	Parent=FBgn0037379.1.mrna1;Target=FBgn0037379.1 403 796 +
Chr2	stalkie_big_nohaplotig	exon	118847550	118847691	100	+	.	Parent=FBgn0037379.1.mrna1;Target=FBgn0037379.1 797 938 +
Chr2	stalkie_big_nohaplotig	exon	118847771	118850489	99	+	.	Parent=FBgn0037379.1.mrna1;Target=FBgn0037379.1 939 3666 +
Chr2	stalkie_big_nohaplotig	CDS	118845939	118846196	.	+	0	Parent=FBgn0037379.1.mrna1;Target=FBgn0037379.1 1 258 +
Chr2	stalkie_big_nohaplotig	CDS	118846267	118846410	.	+	0	Parent=FBgn0037379.1.mrna1;Target=FBgn0037379.1 259 402 +
Chr2	stalkie_big_nohaplotig	CDS	118847074	118847467	.	+	0	Parent=FBgn0037379.1.mrna1;Target=FBgn0037379.1 403 796 +
Chr2	stalkie_big_nohaplotig	CDS	118847550	118847691	.	+	2	Parent=FBgn0037379.1.mrna1;Target=FBgn0037379.1 797 938 +
Chr2	stalkie_big_nohaplotig	CDS	118847771	118850489	.	+	1	Parent=FBgn0037379.1.mrna1;Target=FBgn0037379.1 939 3666 +
Chr2	gffcl	locus	118865449	118880958	.	+	.	ID=RLOC_00021008;geneIDs=FBgn0263353.1.path1;transcripts=FBgn0263353.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118865449	118880958	.	+	.	ID=FBgn0263353.1.mrna1;geneID=FBgn0263353.1.path1;Name=FBgn0263353.1;Dir=sensecoverage=100.0;identity=100.0;matches=864;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021008
Chr2	stalkie_big_nohaplotig	exon	118865449	118865494	100	+	.	Parent=FBgn0263353.1.mrna1;Target=FBgn0263353.1 1 46 +
Chr2	stalkie_big_nohaplotig	exon	118877041	118877114	100	+	.	Parent=FBgn0263353.1.mrna1;Target=FBgn0263353.1 47 120 +
Chr2	stalkie_big_nohaplotig	exon	118877185	118877387	100	+	.	Parent=FBgn0263353.1.mrna1;Target=FBgn0263353.1 121 323 +
Chr2	stalkie_big_nohaplotig	exon	118877507	118877534	100	+	.	Parent=FBgn0263353.1.mrna1;Target=FBgn0263353.1 324 351 +
Chr2	stalkie_big_nohaplotig	exon	118877647	118877731	100	+	.	Parent=FBgn0263353.1.mrna1;Target=FBgn0263353.1 352 436 +
Chr2	stalkie_big_nohaplotig	exon	118880447	118880674	100	+	.	Parent=FBgn0263353.1.mrna1;Target=FBgn0263353.1 437 664 +
Chr2	stalkie_big_nohaplotig	exon	118880759	118880958	100	+	.	Parent=FBgn0263353.1.mrna1;Target=FBgn0263353.1 665 864 +
Chr2	stalkie_big_nohaplotig	CDS	118865449	118865494	.	+	0	Parent=FBgn0263353.1.mrna1;Target=FBgn0263353.1 1 46 +
Chr2	stalkie_big_nohaplotig	CDS	118877041	118877114	.	+	2	Parent=FBgn0263353.1.mrna1;Target=FBgn0263353.1 47 120 +
Chr2	stalkie_big_nohaplotig	CDS	118877185	118877387	.	+	0	Parent=FBgn0263353.1.mrna1;Target=FBgn0263353.1 121 323 +
Chr2	stalkie_big_nohaplotig	CDS	118877507	118877534	.	+	1	Parent=FBgn0263353.1.mrna1;Target=FBgn0263353.1 324 351 +
Chr2	stalkie_big_nohaplotig	CDS	118877647	118877731	.	+	0	Parent=FBgn0263353.1.mrna1;Target=FBgn0263353.1 352 436 +
Chr2	stalkie_big_nohaplotig	CDS	118880447	118880674	.	+	2	Parent=FBgn0263353.1.mrna1;Target=FBgn0263353.1 437 664 +
Chr2	stalkie_big_nohaplotig	CDS	118880759	118880958	.	+	2	Parent=FBgn0263353.1.mrna1;Target=FBgn0263353.1 665 864 +
Chr2	gffcl	locus	118881243	118882203	.	+	.	ID=RLOC_00021009;geneIDs=comp149257_c0_seq1.path1;transcripts=comp149257_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118881243	118882203	.	+	.	ID=comp149257_c0_seq1.mrna1;geneID=comp149257_c0_seq1.path1;Name=comp149257_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.8;matches=960;mismatches=1;indels=1;unknowns=0;Target=comp149257_c0_seq1 969 8 .;CDS_Target=comp149257_c0_seq1 742 653 .;locus=RLOC_00021009
Chr2	stalkie_big_nohaplotig	exon	118881243	118882203	99	+	.	Parent=comp149257_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118881887	118881976	.	+	0	Parent=comp149257_c0_seq1.mrna1
Chr2	gffcl	locus	118883475	118883902	.	-	.	ID=RLOC_00021010;geneIDs=comp154804_c0_seq1.path1;transcripts=comp154804_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118883475	118883902	.	-	.	ID=comp154804_c0_seq1.mrna1;geneID=comp154804_c0_seq1.path1;Name=comp154804_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=422;mismatches=6;indels=0;unknowns=0;Target=comp154804_c0_seq1 428 1 .;CDS_Target=comp154804_c0_seq1 106 2 .;locus=RLOC_00021010
Chr2	stalkie_big_nohaplotig	exon	118883475	118883902	98	-	.	Parent=comp154804_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118883797	118883901	.	-	0	Parent=comp154804_c0_seq1.mrna1
Chr2	gffcl	locus	118885357	118888763	.	-	.	ID=RLOC_00021011;geneIDs=comp157875_c1_seq1.path1;transcripts=comp157875_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118885357	118888763	.	-	.	ID=comp157875_c1_seq1.mrna1;geneID=comp157875_c1_seq1.path1;Name=comp157875_c1_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=2480;mismatches=42;indels=32;unknowns=0;Target=comp157875_c1_seq1 2034 1900 .;locus=RLOC_00021011
Chr2	stalkie_big_nohaplotig	exon	118885357	118886854	96	-	.	Parent=comp157875_c1_seq1.mrna1;Target=comp157875_c1_seq1 2567 1052 .
Chr2	stalkie_big_nohaplotig	exon	118886955	118887322	100	-	.	Parent=comp157875_c1_seq1.mrna1;Target=comp157875_c1_seq1 1051 684 .
Chr2	stalkie_big_nohaplotig	exon	118887809	118887948	95	-	.	Parent=comp157875_c1_seq1.mrna1;Target=comp157875_c1_seq1 665 526 .
Chr2	stalkie_big_nohaplotig	exon	118888243	118888763	97	-	.	Parent=comp157875_c1_seq1.mrna1;Target=comp157875_c1_seq1 525 1 .
Chr2	stalkie_big_nohaplotig	CDS	118885891	118886025	.	-	0	Parent=comp157875_c1_seq1.mrna1
Chr2	gffcl	locus	118889939	118890243	.	+	.	ID=RLOC_00021012;geneIDs=comp135626_c0_seq1.path1;transcripts=comp135626_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118889939	118890243	.	+	.	ID=comp135626_c0_seq1.mrna1;geneID=comp135626_c0_seq1.path1;Name=comp135626_c0_seq1;Dir=indeterminatecoverage=98.7;identity=99.0;matches=302;mismatches=3;indels=0;unknowns=0;Target=comp135626_c0_seq1 305 1 .;CDS_Target=comp135626_c0_seq1 173 3 .;locus=RLOC_00021012
Chr2	stalkie_big_nohaplotig	exon	118889939	118890243	99	+	.	Parent=comp135626_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118889941	118890111	.	+	0	Parent=comp135626_c0_seq1.mrna1
Chr2	gffcl	locus	118907295	118909262	.	-	.	ID=RLOC_00021013;geneIDs=comp162427_c0_seq1.path1;transcripts=comp162427_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118907295	118909262	.	-	.	ID=comp162427_c0_seq1.mrna1;geneID=comp162427_c0_seq1.path1;Name=comp162427_c0_seq1;Dir=antisensecoverage=100.0;identity=98.6;matches=1883;mismatches=17;indels=10;unknowns=0;Target=comp162427_c0_seq1 897 1277 .;locus=RLOC_00021013
Chr2	stalkie_big_nohaplotig	exon	118907295	118908914	98	-	.	Parent=comp162427_c0_seq1.mrna1;Target=comp162427_c0_seq1 1 1626 -
Chr2	stalkie_big_nohaplotig	exon	118908981	118909262	100	-	.	Parent=comp162427_c0_seq1.mrna1;Target=comp162427_c0_seq1 1627 1908 -
Chr2	stalkie_big_nohaplotig	CDS	118908186	118908566	.	-	0	Parent=comp162427_c0_seq1.mrna1
Chr2	gffcl	locus	118918705	118920634	.	+	.	ID=RLOC_00021014;geneIDs=comp141222_c0_seq1.path1;transcripts=comp141222_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118918705	118920634	.	+	.	ID=comp141222_c0_seq1.mrna1;geneID=comp141222_c0_seq1.path1;Name=comp141222_c0_seq1;Dir=antisensecoverage=97.5;identity=99.2;matches=512;mismatches=3;indels=1;unknowns=0;Target=comp141222_c0_seq1 359 514 .;locus=RLOC_00021014
Chr2	stalkie_big_nohaplotig	exon	118918705	118918981	100	+	.	Parent=comp141222_c0_seq1.mrna1;Target=comp141222_c0_seq1 240 516 -
Chr2	stalkie_big_nohaplotig	exon	118920397	118920634	98	+	.	Parent=comp141222_c0_seq1.mrna1;Target=comp141222_c0_seq1 1 239 -
Chr2	stalkie_big_nohaplotig	CDS	118918707	118918862	.	+	0	Parent=comp141222_c0_seq1.mrna1
Chr2	gffcl	locus	118919050	118919840	.	-	.	ID=RLOC_00021015;geneIDs=comp148442_c0_seq1.path1;transcripts=comp148442_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118919050	118919840	.	-	.	ID=comp148442_c0_seq1.mrna1;geneID=comp148442_c0_seq1.path1;Name=comp148442_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.7;matches=789;mismatches=2;indels=0;unknowns=0;Target=comp148442_c0_seq1 794 4 .;CDS_Target=comp148442_c0_seq1 481 305 .;locus=RLOC_00021015
Chr2	stalkie_big_nohaplotig	exon	118919050	118919840	99	-	.	Parent=comp148442_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118919363	118919539	.	-	0	Parent=comp148442_c0_seq1.mrna1
Chr2	gffcl	locus	118920914	118929862	.	+	.	ID=RLOC_00021016;geneIDs=FBgn0261561.1.path1;transcripts=FBgn0261561.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118920914	118929862	.	+	.	ID=FBgn0261561.1.mrna1;geneID=FBgn0261561.1.path1;Name=FBgn0261561.1;Dir=sensecoverage=100.0;identity=100.0;matches=1425;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021016
Chr2	stalkie_big_nohaplotig	exon	118920914	118921075	100	+	.	Parent=FBgn0261561.1.mrna1;Target=FBgn0261561.1 1 162 +
Chr2	stalkie_big_nohaplotig	exon	118926637	118926741	100	+	.	Parent=FBgn0261561.1.mrna1;Target=FBgn0261561.1 163 267 +
Chr2	stalkie_big_nohaplotig	exon	118927248	118927823	100	+	.	Parent=FBgn0261561.1.mrna1;Target=FBgn0261561.1 268 843 +
Chr2	stalkie_big_nohaplotig	exon	118927886	118927930	100	+	.	Parent=FBgn0261561.1.mrna1;Target=FBgn0261561.1 844 888 +
Chr2	stalkie_big_nohaplotig	exon	118929326	118929862	100	+	.	Parent=FBgn0261561.1.mrna1;Target=FBgn0261561.1 889 1425 +
Chr2	stalkie_big_nohaplotig	CDS	118920914	118921075	.	+	0	Parent=FBgn0261561.1.mrna1;Target=FBgn0261561.1 1 162 +
Chr2	stalkie_big_nohaplotig	CDS	118926637	118926741	.	+	0	Parent=FBgn0261561.1.mrna1;Target=FBgn0261561.1 163 267 +
Chr2	stalkie_big_nohaplotig	CDS	118927248	118927823	.	+	0	Parent=FBgn0261561.1.mrna1;Target=FBgn0261561.1 268 843 +
Chr2	stalkie_big_nohaplotig	CDS	118927886	118927930	.	+	0	Parent=FBgn0261561.1.mrna1;Target=FBgn0261561.1 844 888 +
Chr2	stalkie_big_nohaplotig	CDS	118929326	118929862	.	+	0	Parent=FBgn0261561.1.mrna1;Target=FBgn0261561.1 889 1425 +
Chr2	gffcl	locus	118934588	118935779	.	+	.	ID=RLOC_00021017;geneIDs=FBgn0036987.1.path1;transcripts=FBgn0036987.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118934588	118935779	.	+	.	ID=FBgn0036987.1.mrna1;geneID=FBgn0036987.1.path1;Name=FBgn0036987.1;Dir=sensecoverage=100.0;identity=100.0;matches=1131;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021017
Chr2	stalkie_big_nohaplotig	exon	118934588	118934696	100	+	.	Parent=FBgn0036987.1.mrna1;Target=FBgn0036987.1 1 109 +
Chr2	stalkie_big_nohaplotig	exon	118934758	118935779	100	+	.	Parent=FBgn0036987.1.mrna1;Target=FBgn0036987.1 110 1131 +
Chr2	stalkie_big_nohaplotig	CDS	118934588	118934696	.	+	0	Parent=FBgn0036987.1.mrna1;Target=FBgn0036987.1 1 109 +
Chr2	stalkie_big_nohaplotig	CDS	118934758	118935779	.	+	2	Parent=FBgn0036987.1.mrna1;Target=FBgn0036987.1 110 1131 +
Chr2	gffcl	locus	118935968	118936838	.	-	.	ID=RLOC_00021018;geneIDs=FBgn0031764.1.path1;transcripts=FBgn0031764.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118935968	118936838	.	-	.	ID=FBgn0031764.1.mrna1;geneID=FBgn0031764.1.path1;Name=FBgn0031764.1;Dir=sensecoverage=100.0;identity=100.0;matches=816;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021018
Chr2	stalkie_big_nohaplotig	exon	118935968	118936737	100	-	.	Parent=FBgn0031764.1.mrna1;Target=FBgn0031764.1 47 816 +
Chr2	stalkie_big_nohaplotig	exon	118936793	118936838	100	-	.	Parent=FBgn0031764.1.mrna1;Target=FBgn0031764.1 1 46 +
Chr2	stalkie_big_nohaplotig	CDS	118935968	118936737	.	-	2	Parent=FBgn0031764.1.mrna1;Target=FBgn0031764.1 47 816 +
Chr2	stalkie_big_nohaplotig	CDS	118936793	118936838	.	-	0	Parent=FBgn0031764.1.mrna1;Target=FBgn0031764.1 1 46 +
Chr2	gffcl	locus	118938690	118939516	.	+	.	ID=RLOC_00021019;geneIDs=FBgn0039558.1.path1;transcripts=FBgn0039558.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118938690	118939516	.	+	.	ID=FBgn0039558.1.mrna1;geneID=FBgn0039558.1.path1;Name=FBgn0039558.1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=819;mismatches=2;indels=13;unknowns=0;Target=FBgn0039558.1 828 1 .;CDS_Target=FBgn0039558.1 86 3 .;locus=RLOC_00021019
Chr2	stalkie_big_nohaplotig	exon	118938690	118939516	98	+	.	Parent=FBgn0039558.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	118938692	118938774	.	+	0	Parent=FBgn0039558.1.mrna1
Chr2	gffcl	locus	118940092	118945486	.	+	.	ID=RLOC_00021020;geneIDs=FBgn0036986.1.path1;transcripts=FBgn0036986.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	118940092	118945486	.	+	.	ID=FBgn0036986.1.mrna1;geneID=FBgn0036986.1.path1;Name=FBgn0036986.1;Dir=sensecoverage=100.0;identity=99.8;matches=1371;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021020
Chr2	stalkie_big_nohaplotig	exon	118940092	118940943	99	+	.	Parent=FBgn0036986.1.mrna1;Target=FBgn0036986.1 1 852 +
Chr2	stalkie_big_nohaplotig	exon	118941023	118941198	100	+	.	Parent=FBgn0036986.1.mrna1;Target=FBgn0036986.1 853 1028 +
Chr2	stalkie_big_nohaplotig	exon	118945141	118945486	99	+	.	Parent=FBgn0036986.1.mrna1;Target=FBgn0036986.1 1029 1374 +
Chr2	stalkie_big_nohaplotig	CDS	118940092	118940943	.	+	0	Parent=FBgn0036986.1.mrna1;Target=FBgn0036986.1 1 852 +
Chr2	stalkie_big_nohaplotig	CDS	118941023	118941198	.	+	0	Parent=FBgn0036986.1.mrna1;Target=FBgn0036986.1 853 1028 +
Chr2	stalkie_big_nohaplotig	CDS	118945141	118945486	.	+	1	Parent=FBgn0036986.1.mrna1;Target=FBgn0036986.1 1029 1374 +
Chr2	gffcl	locus	119039098	119039238	.	-	.	ID=RLOC_00021021;geneIDs=comp161355_c1_seq1.path2;transcripts=comp161355_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	119039098	119039238	.	-	.	ID=comp161355_c1_seq1.mrna2;geneID=comp161355_c1_seq1.path2;Name=comp161355_c1_seq1;Dir=indeterminatecoverage=8.4;identity=95.0;matches=134;mismatches=7;indels=0;unknowns=0;Target=comp161355_c1_seq1 1677 1537 .;locus=RLOC_00021021
Chr2	stalkie_big_nohaplotig	exon	119039098	119039238	95	-	.	Parent=comp161355_c1_seq1.mrna2
Chr2	gffcl	locus	119040523	119044172	.	-	.	ID=RLOC_00021022;geneIDs=Cotesia.path1,comp163533_c1_seq1.path1;transcripts=comp163533_c1_seq1.mrna1,Cotesia.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	119040523	119044172	.	-	.	ID=comp163533_c1_seq1.mrna1;geneID=comp163533_c1_seq1.path1;Name=comp163533_c1_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=3530;mismatches=120;indels=0;unknowns=0;Target=comp163533_c1_seq1 3650 1 .;CDS_Target=comp163533_c1_seq1 3615 1993 .;locus=RLOC_00021022
Chr2	stalkie_big_nohaplotig	exon	119040523	119044172	96	-	.	Parent=comp163533_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	119040558	119042180	.	-	0	Parent=comp163533_c1_seq1.mrna1
Chr2	gffcl	locus	119071868	119074193	.	+	.	ID=RLOC_00021025;geneIDs=comp163927_c0_seq1.path1;transcripts=comp163927_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	119071868	119074193	.	+	.	ID=comp163927_c0_seq1.mrna1;geneID=comp163927_c0_seq1.path1;Name=comp163927_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=2322;mismatches=4;indels=0;unknowns=0;Target=comp163927_c0_seq1 2326 1 .;CDS_Target=comp163927_c0_seq1 244 2 .;locus=RLOC_00021025
Chr2	stalkie_big_nohaplotig	exon	119071868	119074193	99	+	.	Parent=comp163927_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	119071869	119072111	.	+	0	Parent=comp163927_c0_seq1.mrna1
Chr2	gffcl	locus	119086162	119087213	.	-	.	ID=RLOC_00021026;geneIDs=comp134996_c0_seq1.path4;transcripts=comp134996_c0_seq1.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	119086162	119087213	.	-	.	ID=comp134996_c0_seq1.mrna4;geneID=comp134996_c0_seq1.path4;Name=comp134996_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1047;mismatches=5;indels=0;unknowns=0;Target=comp134996_c0_seq1 1052 1 .;CDS_Target=comp134996_c0_seq1 209 3 .;locus=RLOC_00021026
Chr2	stalkie_big_nohaplotig	exon	119086162	119087213	99	-	.	Parent=comp134996_c0_seq1.mrna4
Chr2	stalkie_big_nohaplotig	CDS	119087005	119087211	.	-	0	Parent=comp134996_c0_seq1.mrna4
Chr2	gffcl	locus	119203608	119204162	.	-	.	ID=RLOC_00021028;geneIDs=comp1292276_c0_seq1.path1;transcripts=comp1292276_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	119203608	119204162	.	-	.	ID=comp1292276_c0_seq1.mrna1;geneID=comp1292276_c0_seq1.path1;Name=comp1292276_c0_seq1;Dir=indeterminatecoverage=88.7;identity=100.0;matches=555;mismatches=0;indels=0;unknowns=0;Target=comp1292276_c0_seq1 555 1 .;CDS_Target=comp1292276_c0_seq1 478 380 .;locus=RLOC_00021028
Chr2	stalkie_big_nohaplotig	exon	119203608	119204162	100	-	.	Parent=comp1292276_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	119203685	119203783	.	-	0	Parent=comp1292276_c0_seq1.mrna1
Chr2	gffcl	locus	119251715	119252847	.	+	.	ID=RLOC_00021029;geneIDs=comp163325_c0_seq1.path2;transcripts=comp163325_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	119251715	119252847	.	+	.	ID=comp163325_c0_seq1.mrna2;geneID=comp163325_c0_seq1.path2;Name=comp163325_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1132;mismatches=1;indels=0;unknowns=0;Target=comp163325_c0_seq1 1133 1 .;CDS_Target=comp163325_c0_seq1 255 1 .;locus=RLOC_00021029
Chr2	stalkie_big_nohaplotig	exon	119251715	119252847	99	+	.	Parent=comp163325_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	119251715	119251969	.	+	0	Parent=comp163325_c0_seq1.mrna2
Chr2	gffcl	locus	119341922	119342253	.	+	.	ID=RLOC_00021030;geneIDs=comp144903_c0_seq1.path1;transcripts=comp144903_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	119341922	119342253	.	+	.	ID=comp144903_c0_seq1.mrna1;geneID=comp144903_c0_seq1.path1;Name=comp144903_c0_seq1;Dir=indeterminatecoverage=95.5;identity=95.6;matches=328;mismatches=4;indels=11;unknowns=0;Target=comp144903_c0_seq1 346 4 .;CDS_Target=comp144903_c0_seq1 322 230 .;locus=RLOC_00021030
Chr2	stalkie_big_nohaplotig	exon	119341922	119342253	95	+	.	Parent=comp144903_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	119342137	119342229	.	+	0	Parent=comp144903_c0_seq1.mrna1
Chr2	gffcl	locus	119344367	119346475	.	-	.	ID=RLOC_00021031;geneIDs=FBgn0002565.1.path1;transcripts=FBgn0002565.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	119344367	119346475	.	-	.	ID=FBgn0002565.1.mrna1;geneID=FBgn0002565.1.path1;Name=FBgn0002565.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2109;mismatches=0;indels=0;unknowns=0;Target=FBgn0002565.1 2109 1 .;locus=RLOC_00021031
Chr2	stalkie_big_nohaplotig	exon	119344367	119346475	100	-	.	Parent=FBgn0002565.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	119344367	119346475	.	-	0	Parent=FBgn0002565.1.mrna1
Chr2	gffcl	locus	119402320	119478078	.	+	.	ID=RLOC_00021033;geneIDs=FBgn0013813.1.path1;transcripts=FBgn0013813.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	119402320	119478078	.	+	.	ID=FBgn0013813.1.mrna1;geneID=FBgn0013813.1.path1;Name=FBgn0013813.1;Dir=sensecoverage=100.0;identity=99.9;matches=14446;mismatches=21;indels=0;unknowns=0;locus=RLOC_00021033
Chr2	stalkie_big_nohaplotig	exon	119402320	119402398	98	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 6 84 +
Chr2	stalkie_big_nohaplotig	exon	119402871	119402988	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 85 202 +
Chr2	stalkie_big_nohaplotig	exon	119403764	119403867	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 203 306 +
Chr2	stalkie_big_nohaplotig	exon	119404664	119404848	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 307 491 +
Chr2	stalkie_big_nohaplotig	exon	119405748	119405899	98	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 492 643 +
Chr2	stalkie_big_nohaplotig	exon	119407257	119407642	99	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 644 1029 +
Chr2	stalkie_big_nohaplotig	exon	119407702	119407813	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 1030 1141 +
Chr2	stalkie_big_nohaplotig	exon	119407882	119408009	99	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 1142 1269 +
Chr2	stalkie_big_nohaplotig	exon	119409217	119409407	99	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 1270 1460 +
Chr2	stalkie_big_nohaplotig	exon	119409466	119410060	99	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 1461 2055 +
Chr2	stalkie_big_nohaplotig	exon	119410123	119410236	99	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 2056 2169 +
Chr2	stalkie_big_nohaplotig	exon	119410314	119410506	97	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 2170 2362 +
Chr2	stalkie_big_nohaplotig	exon	119410575	119410615	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 2363 2403 +
Chr2	stalkie_big_nohaplotig	exon	119410688	119410925	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 2404 2641 +
Chr2	stalkie_big_nohaplotig	exon	119411186	119411293	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 2642 2749 +
Chr2	stalkie_big_nohaplotig	exon	119411419	119411591	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 2750 2922 +
Chr2	stalkie_big_nohaplotig	exon	119411653	119412245	99	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 2923 3515 +
Chr2	stalkie_big_nohaplotig	exon	119412306	119412467	99	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 3516 3677 +
Chr2	stalkie_big_nohaplotig	exon	119412533	119412641	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 3678 3786 +
Chr2	stalkie_big_nohaplotig	exon	119413532	119413614	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 3787 3869 +
Chr2	stalkie_big_nohaplotig	exon	119414750	119415041	99	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 3870 4161 +
Chr2	stalkie_big_nohaplotig	exon	119415106	119415264	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 4162 4320 +
Chr2	stalkie_big_nohaplotig	exon	119418378	119418530	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 4321 4473 +
Chr2	stalkie_big_nohaplotig	exon	119421647	119421779	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 4474 4606 +
Chr2	stalkie_big_nohaplotig	exon	119421853	119421938	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 4607 4692 +
Chr2	stalkie_big_nohaplotig	exon	119422084	119422218	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 4693 4827 +
Chr2	stalkie_big_nohaplotig	exon	119425153	119425359	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 4828 5034 +
Chr2	stalkie_big_nohaplotig	exon	119425596	119425810	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 5035 5249 +
Chr2	stalkie_big_nohaplotig	exon	119428089	119428284	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 5250 5445 +
Chr2	stalkie_big_nohaplotig	exon	119428930	119429163	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 5446 5679 +
Chr2	stalkie_big_nohaplotig	exon	119429635	119429743	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 5680 5788 +
Chr2	stalkie_big_nohaplotig	exon	119434110	119434230	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 5789 5909 +
Chr2	stalkie_big_nohaplotig	exon	119434695	119435439	99	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 5910 6654 +
Chr2	stalkie_big_nohaplotig	exon	119437864	119438052	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 6655 6843 +
Chr2	stalkie_big_nohaplotig	exon	119438345	119438578	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 6844 7077 +
Chr2	stalkie_big_nohaplotig	exon	119440884	119440988	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 7078 7182 +
Chr2	stalkie_big_nohaplotig	exon	119441729	119441887	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 7183 7341 +
Chr2	stalkie_big_nohaplotig	exon	119444639	119444749	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 7342 7452 +
Chr2	stalkie_big_nohaplotig	exon	119446255	119446398	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 7453 7596 +
Chr2	stalkie_big_nohaplotig	exon	119446633	119446773	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 7597 7737 +
Chr2	stalkie_big_nohaplotig	exon	119446839	119447078	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 7738 7977 +
Chr2	stalkie_big_nohaplotig	exon	119447162	119447467	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 7978 8283 +
Chr2	stalkie_big_nohaplotig	exon	119447622	119447714	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 8284 8376 +
Chr2	stalkie_big_nohaplotig	exon	119447866	119448026	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 8377 8537 +
Chr2	stalkie_big_nohaplotig	exon	119449409	119449736	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 8538 8865 +
Chr2	stalkie_big_nohaplotig	exon	119452986	119453174	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 8866 9054 +
Chr2	stalkie_big_nohaplotig	exon	119453712	119453817	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 9055 9160 +
Chr2	stalkie_big_nohaplotig	exon	119455371	119455552	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 9161 9342 +
Chr2	stalkie_big_nohaplotig	exon	119455616	119455793	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 9343 9520 +
Chr2	stalkie_big_nohaplotig	exon	119455888	119456018	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 9521 9651 +
Chr2	stalkie_big_nohaplotig	exon	119456089	119456231	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 9652 9794 +
Chr2	stalkie_big_nohaplotig	exon	119456305	119456509	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 9795 9999 +
Chr2	stalkie_big_nohaplotig	exon	119456564	119456723	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 10000 10159 +
Chr2	stalkie_big_nohaplotig	exon	119456809	119457653	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 10160 11004 +
Chr2	stalkie_big_nohaplotig	exon	119457715	119459175	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 11005 12465 +
Chr2	stalkie_big_nohaplotig	exon	119459405	119459476	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 12466 12537 +
Chr2	stalkie_big_nohaplotig	exon	119459770	119460036	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 12538 12804 +
Chr2	stalkie_big_nohaplotig	exon	119461288	119461489	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 12805 13006 +
Chr2	stalkie_big_nohaplotig	exon	119461545	119461687	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 13007 13149 +
Chr2	stalkie_big_nohaplotig	exon	119462381	119462542	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 13150 13311 +
Chr2	stalkie_big_nohaplotig	exon	119462678	119462855	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 13312 13489 +
Chr2	stalkie_big_nohaplotig	exon	119462920	119463051	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 13490 13621 +
Chr2	stalkie_big_nohaplotig	exon	119469525	119469736	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 13622 13833 +
Chr2	stalkie_big_nohaplotig	exon	119474304	119474444	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 13834 13974 +
Chr2	stalkie_big_nohaplotig	exon	119476265	119476369	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 13975 14079 +
Chr2	stalkie_big_nohaplotig	exon	119476455	119476556	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 14080 14181 +
Chr2	stalkie_big_nohaplotig	exon	119477410	119477556	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 14182 14328 +
Chr2	stalkie_big_nohaplotig	exon	119477935	119478078	100	+	.	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 14329 14472 +
Chr2	stalkie_big_nohaplotig	CDS	119402321	119402398	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 7 84 +
Chr2	stalkie_big_nohaplotig	CDS	119402871	119402988	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 85 202 +
Chr2	stalkie_big_nohaplotig	CDS	119403764	119403867	.	+	2	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 203 306 +
Chr2	stalkie_big_nohaplotig	CDS	119404664	119404848	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 307 491 +
Chr2	stalkie_big_nohaplotig	CDS	119405748	119405899	.	+	1	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 492 643 +
Chr2	stalkie_big_nohaplotig	CDS	119407257	119407642	.	+	2	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 644 1029 +
Chr2	stalkie_big_nohaplotig	CDS	119407702	119407813	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 1030 1141 +
Chr2	stalkie_big_nohaplotig	CDS	119407882	119408009	.	+	2	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 1142 1269 +
Chr2	stalkie_big_nohaplotig	CDS	119409217	119409407	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 1270 1460 +
Chr2	stalkie_big_nohaplotig	CDS	119409466	119410060	.	+	1	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 1461 2055 +
Chr2	stalkie_big_nohaplotig	CDS	119410123	119410236	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 2056 2169 +
Chr2	stalkie_big_nohaplotig	CDS	119410314	119410506	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 2170 2362 +
Chr2	stalkie_big_nohaplotig	CDS	119410575	119410615	.	+	2	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 2363 2403 +
Chr2	stalkie_big_nohaplotig	CDS	119410688	119410925	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 2404 2641 +
Chr2	stalkie_big_nohaplotig	CDS	119411186	119411293	.	+	2	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 2642 2749 +
Chr2	stalkie_big_nohaplotig	CDS	119411419	119411591	.	+	2	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 2750 2922 +
Chr2	stalkie_big_nohaplotig	CDS	119411653	119412245	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 2923 3515 +
Chr2	stalkie_big_nohaplotig	CDS	119412306	119412467	.	+	1	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 3516 3677 +
Chr2	stalkie_big_nohaplotig	CDS	119412533	119412641	.	+	1	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 3678 3786 +
Chr2	stalkie_big_nohaplotig	CDS	119413532	119413614	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 3787 3869 +
Chr2	stalkie_big_nohaplotig	CDS	119414750	119415041	.	+	1	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 3870 4161 +
Chr2	stalkie_big_nohaplotig	CDS	119415106	119415264	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 4162 4320 +
Chr2	stalkie_big_nohaplotig	CDS	119418378	119418530	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 4321 4473 +
Chr2	stalkie_big_nohaplotig	CDS	119421647	119421779	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 4474 4606 +
Chr2	stalkie_big_nohaplotig	CDS	119421853	119421938	.	+	2	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 4607 4692 +
Chr2	stalkie_big_nohaplotig	CDS	119422084	119422218	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 4693 4827 +
Chr2	stalkie_big_nohaplotig	CDS	119425153	119425359	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 4828 5034 +
Chr2	stalkie_big_nohaplotig	CDS	119425596	119425810	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 5035 5249 +
Chr2	stalkie_big_nohaplotig	CDS	119428089	119428284	.	+	1	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 5250 5445 +
Chr2	stalkie_big_nohaplotig	CDS	119428930	119429163	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 5446 5679 +
Chr2	stalkie_big_nohaplotig	CDS	119429635	119429743	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 5680 5788 +
Chr2	stalkie_big_nohaplotig	CDS	119434110	119434230	.	+	2	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 5789 5909 +
Chr2	stalkie_big_nohaplotig	CDS	119434695	119435439	.	+	1	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 5910 6654 +
Chr2	stalkie_big_nohaplotig	CDS	119437864	119438052	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 6655 6843 +
Chr2	stalkie_big_nohaplotig	CDS	119438345	119438578	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 6844 7077 +
Chr2	stalkie_big_nohaplotig	CDS	119440884	119440988	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 7078 7182 +
Chr2	stalkie_big_nohaplotig	CDS	119441729	119441887	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 7183 7341 +
Chr2	stalkie_big_nohaplotig	CDS	119444639	119444749	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 7342 7452 +
Chr2	stalkie_big_nohaplotig	CDS	119446255	119446398	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 7453 7596 +
Chr2	stalkie_big_nohaplotig	CDS	119446633	119446773	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 7597 7737 +
Chr2	stalkie_big_nohaplotig	CDS	119446839	119447078	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 7738 7977 +
Chr2	stalkie_big_nohaplotig	CDS	119447162	119447467	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 7978 8283 +
Chr2	stalkie_big_nohaplotig	CDS	119447622	119447714	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 8284 8376 +
Chr2	stalkie_big_nohaplotig	CDS	119447866	119448026	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 8377 8537 +
Chr2	stalkie_big_nohaplotig	CDS	119449409	119449736	.	+	1	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 8538 8865 +
Chr2	stalkie_big_nohaplotig	CDS	119452986	119453174	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 8866 9054 +
Chr2	stalkie_big_nohaplotig	CDS	119453712	119453817	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 9055 9160 +
Chr2	stalkie_big_nohaplotig	CDS	119455371	119455552	.	+	2	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 9161 9342 +
Chr2	stalkie_big_nohaplotig	CDS	119455616	119455793	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 9343 9520 +
Chr2	stalkie_big_nohaplotig	CDS	119455888	119456018	.	+	2	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 9521 9651 +
Chr2	stalkie_big_nohaplotig	CDS	119456089	119456231	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 9652 9794 +
Chr2	stalkie_big_nohaplotig	CDS	119456305	119456509	.	+	1	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 9795 9999 +
Chr2	stalkie_big_nohaplotig	CDS	119456564	119456723	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 10000 10159 +
Chr2	stalkie_big_nohaplotig	CDS	119456809	119457653	.	+	2	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 10160 11004 +
Chr2	stalkie_big_nohaplotig	CDS	119457715	119459175	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 11005 12465 +
Chr2	stalkie_big_nohaplotig	CDS	119459405	119459476	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 12466 12537 +
Chr2	stalkie_big_nohaplotig	CDS	119459770	119460036	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 12538 12804 +
Chr2	stalkie_big_nohaplotig	CDS	119461288	119461489	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 12805 13006 +
Chr2	stalkie_big_nohaplotig	CDS	119461545	119461687	.	+	2	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 13007 13149 +
Chr2	stalkie_big_nohaplotig	CDS	119462381	119462542	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 13150 13311 +
Chr2	stalkie_big_nohaplotig	CDS	119462678	119462855	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 13312 13489 +
Chr2	stalkie_big_nohaplotig	CDS	119462920	119463051	.	+	2	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 13490 13621 +
Chr2	stalkie_big_nohaplotig	CDS	119469525	119469736	.	+	2	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 13622 13833 +
Chr2	stalkie_big_nohaplotig	CDS	119474304	119474444	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 13834 13974 +
Chr2	stalkie_big_nohaplotig	CDS	119476265	119476369	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 13975 14079 +
Chr2	stalkie_big_nohaplotig	CDS	119476455	119476556	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 14080 14181 +
Chr2	stalkie_big_nohaplotig	CDS	119477410	119477556	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 14182 14328 +
Chr2	stalkie_big_nohaplotig	CDS	119477935	119478078	.	+	0	Parent=FBgn0013813.1.mrna1;Target=FBgn0013813.1 14329 14472 +
Chr2	gffcl	locus	119482666	119483943	.	-	.	ID=RLOC_00021034;geneIDs=FBgn0051051.1.path1;transcripts=FBgn0051051.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	119482666	119483943	.	-	.	ID=FBgn0051051.1.mrna1;geneID=FBgn0051051.1.path1;Name=FBgn0051051.1;Dir=sensecoverage=100.0;identity=99.6;matches=672;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021034
Chr2	stalkie_big_nohaplotig	exon	119482666	119482882	99	-	.	Parent=FBgn0051051.1.mrna1;Target=FBgn0051051.1 459 675 +
Chr2	stalkie_big_nohaplotig	exon	119483342	119483445	100	-	.	Parent=FBgn0051051.1.mrna1;Target=FBgn0051051.1 355 458 +
Chr2	stalkie_big_nohaplotig	exon	119483526	119483795	99	-	.	Parent=FBgn0051051.1.mrna1;Target=FBgn0051051.1 85 354 +
Chr2	stalkie_big_nohaplotig	exon	119483860	119483943	98	-	.	Parent=FBgn0051051.1.mrna1;Target=FBgn0051051.1 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	119482666	119482882	.	-	1	Parent=FBgn0051051.1.mrna1;Target=FBgn0051051.1 459 675 +
Chr2	stalkie_big_nohaplotig	CDS	119483342	119483445	.	-	0	Parent=FBgn0051051.1.mrna1;Target=FBgn0051051.1 355 458 +
Chr2	stalkie_big_nohaplotig	CDS	119483526	119483795	.	-	0	Parent=FBgn0051051.1.mrna1;Target=FBgn0051051.1 85 354 +
Chr2	stalkie_big_nohaplotig	CDS	119483860	119483943	.	-	0	Parent=FBgn0051051.1.mrna1;Target=FBgn0051051.1 1 84 +
Chr2	gffcl	locus	119484781	119514296	.	-	.	ID=RLOC_00021035;geneIDs=FBgn0003137.1.path1;transcripts=FBgn0003137.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	119484781	119514296	.	-	.	ID=FBgn0003137.1.mrna1;geneID=FBgn0003137.1.path1;Name=FBgn0003137.1;Dir=sensecoverage=99.6;identity=100.0;matches=9116;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021035
Chr2	stalkie_big_nohaplotig	exon	119484781	119484941	100	-	.	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 8999 9159 +
Chr2	stalkie_big_nohaplotig	exon	119485706	119485822	100	-	.	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 8882 8998 +
Chr2	stalkie_big_nohaplotig	exon	119485891	119486049	100	-	.	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 8723 8881 +
Chr2	stalkie_big_nohaplotig	exon	119486475	119486933	100	-	.	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 8264 8722 +
Chr2	stalkie_big_nohaplotig	exon	119487086	119487236	100	-	.	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 8113 8263 +
Chr2	stalkie_big_nohaplotig	exon	119487294	119487874	100	-	.	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 7532 8112 +
Chr2	stalkie_big_nohaplotig	exon	119488170	119488340	100	-	.	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 7361 7531 +
Chr2	stalkie_big_nohaplotig	exon	119488410	119488604	100	-	.	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 7166 7360 +
Chr2	stalkie_big_nohaplotig	exon	119488659	119488842	100	-	.	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 6982 7165 +
Chr2	stalkie_big_nohaplotig	exon	119488905	119489956	100	-	.	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 5930 6981 +
Chr2	stalkie_big_nohaplotig	exon	119490075	119490245	100	-	.	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 5759 5929 +
Chr2	stalkie_big_nohaplotig	exon	119508085	119508264	100	-	.	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 5579 5758 +
Chr2	stalkie_big_nohaplotig	exon	119508329	119512292	99	-	.	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 1615 5578 +
Chr2	stalkie_big_nohaplotig	exon	119512350	119512529	100	-	.	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 1435 1614 +
Chr2	stalkie_big_nohaplotig	exon	119512585	119512708	100	-	.	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 1311 1434 +
Chr2	stalkie_big_nohaplotig	exon	119512781	119513390	100	-	.	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 701 1310 +
Chr2	stalkie_big_nohaplotig	exon	119513446	119513864	100	-	.	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 282 700 +
Chr2	stalkie_big_nohaplotig	exon	119513999	119514177	100	-	.	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 103 281 +
Chr2	stalkie_big_nohaplotig	exon	119514236	119514296	100	-	.	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 42 102 +
Chr2	stalkie_big_nohaplotig	CDS	119484781	119484941	.	-	2	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 8999 9159 +
Chr2	stalkie_big_nohaplotig	CDS	119485706	119485822	.	-	2	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 8882 8998 +
Chr2	stalkie_big_nohaplotig	CDS	119485891	119486049	.	-	2	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 8723 8881 +
Chr2	stalkie_big_nohaplotig	CDS	119486475	119486933	.	-	2	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 8264 8722 +
Chr2	stalkie_big_nohaplotig	CDS	119487086	119487236	.	-	0	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 8113 8263 +
Chr2	stalkie_big_nohaplotig	CDS	119487294	119487874	.	-	2	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 7532 8112 +
Chr2	stalkie_big_nohaplotig	CDS	119488170	119488340	.	-	2	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 7361 7531 +
Chr2	stalkie_big_nohaplotig	CDS	119488410	119488604	.	-	2	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 7166 7360 +
Chr2	stalkie_big_nohaplotig	CDS	119488659	119488842	.	-	0	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 6982 7165 +
Chr2	stalkie_big_nohaplotig	CDS	119488905	119489956	.	-	2	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 5930 6981 +
Chr2	stalkie_big_nohaplotig	CDS	119490075	119490245	.	-	2	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 5759 5929 +
Chr2	stalkie_big_nohaplotig	CDS	119508085	119508264	.	-	2	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 5579 5758 +
Chr2	stalkie_big_nohaplotig	CDS	119508329	119512292	.	-	0	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 1615 5578 +
Chr2	stalkie_big_nohaplotig	CDS	119512350	119512529	.	-	0	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 1435 1614 +
Chr2	stalkie_big_nohaplotig	CDS	119512585	119512708	.	-	1	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 1311 1434 +
Chr2	stalkie_big_nohaplotig	CDS	119512781	119513390	.	-	2	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 701 1310 +
Chr2	stalkie_big_nohaplotig	CDS	119513446	119513864	.	-	1	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 282 700 +
Chr2	stalkie_big_nohaplotig	CDS	119513999	119514177	.	-	0	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 103 281 +
Chr2	stalkie_big_nohaplotig	CDS	119514236	119514295	.	-	0	Parent=FBgn0003137.1.mrna1;Target=FBgn0003137.1 43 102 +
Chr2	gffcl	locus	119558061	119563704	.	-	.	ID=RLOC_00021036;geneIDs=FBgn0039588.1.path1;transcripts=FBgn0039588.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	119558061	119563704	.	-	.	ID=FBgn0039588.1.mrna1;geneID=FBgn0039588.1.path1;Name=FBgn0039588.1;Dir=sensecoverage=100.0;identity=99.9;matches=2070;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021036
Chr2	stalkie_big_nohaplotig	exon	119558061	119558230	100	-	.	Parent=FBgn0039588.1.mrna1;Target=FBgn0039588.1 1904 2073 +
Chr2	stalkie_big_nohaplotig	exon	119558295	119558952	100	-	.	Parent=FBgn0039588.1.mrna1;Target=FBgn0039588.1 1246 1903 +
Chr2	stalkie_big_nohaplotig	exon	119559014	119559218	100	-	.	Parent=FBgn0039588.1.mrna1;Target=FBgn0039588.1 1041 1245 +
Chr2	stalkie_big_nohaplotig	exon	119561210	119561424	100	-	.	Parent=FBgn0039588.1.mrna1;Target=FBgn0039588.1 826 1040 +
Chr2	stalkie_big_nohaplotig	exon	119561481	119561530	100	-	.	Parent=FBgn0039588.1.mrna1;Target=FBgn0039588.1 776 825 +
Chr2	stalkie_big_nohaplotig	exon	119561598	119562052	100	-	.	Parent=FBgn0039588.1.mrna1;Target=FBgn0039588.1 321 775 +
Chr2	stalkie_big_nohaplotig	exon	119563112	119563172	98	-	.	Parent=FBgn0039588.1.mrna1;Target=FBgn0039588.1 260 320 +
Chr2	stalkie_big_nohaplotig	exon	119563231	119563336	98	-	.	Parent=FBgn0039588.1.mrna1;Target=FBgn0039588.1 154 259 +
Chr2	stalkie_big_nohaplotig	exon	119563400	119563511	100	-	.	Parent=FBgn0039588.1.mrna1;Target=FBgn0039588.1 42 153 +
Chr2	stalkie_big_nohaplotig	exon	119563664	119563704	100	-	.	Parent=FBgn0039588.1.mrna1;Target=FBgn0039588.1 1 41 +
Chr2	stalkie_big_nohaplotig	CDS	119558061	119558230	.	-	2	Parent=FBgn0039588.1.mrna1;Target=FBgn0039588.1 1904 2073 +
Chr2	stalkie_big_nohaplotig	CDS	119558295	119558952	.	-	0	Parent=FBgn0039588.1.mrna1;Target=FBgn0039588.1 1246 1903 +
Chr2	stalkie_big_nohaplotig	CDS	119559014	119559218	.	-	1	Parent=FBgn0039588.1.mrna1;Target=FBgn0039588.1 1041 1245 +
Chr2	stalkie_big_nohaplotig	CDS	119561210	119561424	.	-	0	Parent=FBgn0039588.1.mrna1;Target=FBgn0039588.1 826 1040 +
Chr2	stalkie_big_nohaplotig	CDS	119561481	119561530	.	-	2	Parent=FBgn0039588.1.mrna1;Target=FBgn0039588.1 776 825 +
Chr2	stalkie_big_nohaplotig	CDS	119561598	119562052	.	-	1	Parent=FBgn0039588.1.mrna1;Target=FBgn0039588.1 321 775 +
Chr2	stalkie_big_nohaplotig	CDS	119563112	119563172	.	-	2	Parent=FBgn0039588.1.mrna1;Target=FBgn0039588.1 260 320 +
Chr2	stalkie_big_nohaplotig	CDS	119563231	119563336	.	-	0	Parent=FBgn0039588.1.mrna1;Target=FBgn0039588.1 154 259 +
Chr2	stalkie_big_nohaplotig	CDS	119563400	119563511	.	-	1	Parent=FBgn0039588.1.mrna1;Target=FBgn0039588.1 42 153 +
Chr2	stalkie_big_nohaplotig	CDS	119563664	119563704	.	-	0	Parent=FBgn0039588.1.mrna1;Target=FBgn0039588.1 1 41 +
Chr2	gffcl	locus	119569411	119570866	.	-	.	ID=RLOC_00021037;geneIDs=comp154638_c0_seq1.path1;transcripts=comp154638_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	119569411	119570866	.	-	.	ID=comp154638_c0_seq1.mrna1;geneID=comp154638_c0_seq1.path1;Name=comp154638_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=1257;mismatches=0;indels=0;unknowns=0;Target=comp154638_c0_seq1 613 798 +;locus=RLOC_00021037
Chr2	stalkie_big_nohaplotig	exon	119569411	119570195	100	-	.	Parent=comp154638_c0_seq1.mrna1;Target=comp154638_c0_seq1 473 1257 +
Chr2	stalkie_big_nohaplotig	exon	119570395	119570866	100	-	.	Parent=comp154638_c0_seq1.mrna1;Target=comp154638_c0_seq1 1 472 +
Chr2	stalkie_big_nohaplotig	CDS	119569870	119570055	.	-	0	Parent=comp154638_c0_seq1.mrna1
Chr2	gffcl	locus	119679431	119682118	.	.	.	ID=RLOC_00021038;geneIDs=FBgn0004244.1.path1,comp151437_c0_seq1.path1;transcripts=FBgn0004244.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	119679431	119680821	.	-	.	ID=FBgn0004244.1.mrna1;geneID=FBgn0004244.1.path1;Name=FBgn0004244.1;Dir=indeterminatecoverage=48.1;identity=100.0;matches=1391;mismatches=0;indels=0;unknowns=0;Target=FBgn0004244.1 2889 1499 .;CDS_Target=FBgn0004244.1 2889 1501 .;locus=RLOC_00021038
Chr2	stalkie_big_nohaplotig	exon	119679431	119680821	100	-	.	Parent=FBgn0004244.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	119679431	119680819	.	-	0	Parent=FBgn0004244.1.mrna1
Chr2	gffcl	locus	119687147	119687846	.	-	.	ID=RLOC_00021039;geneIDs=comp151072_c0_seq1.path1;transcripts=comp151072_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	119687147	119687846	.	-	.	ID=comp151072_c0_seq1.mrna1;geneID=comp151072_c0_seq1.path1;Name=comp151072_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.3;matches=694;mismatches=6;indels=44;unknowns=0;Target=comp151072_c0_seq1 744 1 .;CDS_Target=comp151072_c0_seq1 87 1 .;locus=RLOC_00021039
Chr2	stalkie_big_nohaplotig	exon	119687147	119687846	93	-	.	Parent=comp151072_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	119687760	119687846	.	-	0	Parent=comp151072_c0_seq1.mrna1
Chr2	gffcl	locus	119690039	119691183	.	+	.	ID=RLOC_00021040;geneIDs=comp158259_c0_seq1.path1;transcripts=comp158259_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	119690039	119691183	.	+	.	ID=comp158259_c0_seq1.mrna1;geneID=comp158259_c0_seq1.path1;Name=comp158259_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1135;mismatches=5;indels=10;unknowns=0;Target=comp158259_c0_seq1 1145 1 .;CDS_Target=comp158259_c0_seq1 912 778 .;locus=RLOC_00021040
Chr2	stalkie_big_nohaplotig	exon	119690039	119691183	98	+	.	Parent=comp158259_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	119690816	119690950	.	+	0	Parent=comp158259_c0_seq1.mrna1
Chr2	gffcl	locus	119730141	119731401	.	-	.	ID=RLOC_00021041;geneIDs=FBgn0003867.1.path1;transcripts=FBgn0003867.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	119730141	119731401	.	-	.	ID=FBgn0003867.1.mrna1;geneID=FBgn0003867.1.path1;Name=FBgn0003867.1;Dir=sensecoverage=100.0;identity=100.0;matches=1059;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021041
Chr2	stalkie_big_nohaplotig	exon	119730141	119730545	100	-	.	Parent=FBgn0003867.1.mrna1;Target=FBgn0003867.1 655 1059 +
Chr2	stalkie_big_nohaplotig	exon	119730609	119730694	100	-	.	Parent=FBgn0003867.1.mrna1;Target=FBgn0003867.1 569 654 +
Chr2	stalkie_big_nohaplotig	exon	119730758	119731103	100	-	.	Parent=FBgn0003867.1.mrna1;Target=FBgn0003867.1 223 568 +
Chr2	stalkie_big_nohaplotig	exon	119731180	119731401	100	-	.	Parent=FBgn0003867.1.mrna1;Target=FBgn0003867.1 1 222 +
Chr2	stalkie_big_nohaplotig	CDS	119730141	119730545	.	-	0	Parent=FBgn0003867.1.mrna1;Target=FBgn0003867.1 655 1059 +
Chr2	stalkie_big_nohaplotig	CDS	119730609	119730694	.	-	2	Parent=FBgn0003867.1.mrna1;Target=FBgn0003867.1 569 654 +
Chr2	stalkie_big_nohaplotig	CDS	119730758	119731103	.	-	0	Parent=FBgn0003867.1.mrna1;Target=FBgn0003867.1 223 568 +
Chr2	stalkie_big_nohaplotig	CDS	119731180	119731401	.	-	0	Parent=FBgn0003867.1.mrna1;Target=FBgn0003867.1 1 222 +
Chr2	gffcl	locus	119759650	119761019	.	-	.	ID=RLOC_00021042;geneIDs=comp135767_c0_seq1.path1,comp152956_c0_seq1.path1;transcripts=comp152956_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	119760144	119761019	.	-	.	ID=comp152956_c0_seq1.mrna1;geneID=comp152956_c0_seq1.path1;Name=comp152956_c0_seq1;Dir=indeterminatecoverage=91.9;identity=99.0;matches=874;mismatches=2;indels=7;unknowns=0;Target=comp152956_c0_seq1 928 46 .;CDS_Target=comp152956_c0_seq1 183 46 .;locus=RLOC_00021042
Chr2	stalkie_big_nohaplotig	exon	119760144	119761019	98	-	.	Parent=comp152956_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	119760882	119761019	.	-	0	Parent=comp152956_c0_seq1.mrna1
Chr2	gffcl	locus	119762083	119763552	.	-	.	ID=RLOC_00021043;geneIDs=comp145713_c0_seq1.path1,comp155771_c0_seq1.path1;transcripts=comp155771_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	119762503	119763552	.	-	.	ID=comp155771_c0_seq1.mrna1;geneID=comp155771_c0_seq1.path1;Name=comp155771_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.9;matches=1036;mismatches=14;indels=30;unknowns=0;Target=comp155771_c0_seq1 1080 1 .;CDS_Target=comp155771_c0_seq1 248 120 .;locus=RLOC_00021043
Chr2	stalkie_big_nohaplotig	exon	119762503	119763552	95	-	.	Parent=comp155771_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	119763305	119763433	.	-	0	Parent=comp155771_c0_seq1.mrna1
Chr2	gffcl	locus	119763981	119764772	.	-	.	ID=RLOC_00021044;geneIDs=comp150169_c0_seq1.path1;transcripts=comp150169_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	119763981	119764772	.	-	.	ID=comp150169_c0_seq1.mrna1;geneID=comp150169_c0_seq1.path1;Name=comp150169_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=790;mismatches=2;indels=0;unknowns=0;Target=comp150169_c0_seq1 792 1 .;CDS_Target=comp150169_c0_seq1 425 330 .;locus=RLOC_00021044
Chr2	stalkie_big_nohaplotig	exon	119763981	119764772	99	-	.	Parent=comp150169_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	119764348	119764443	.	-	0	Parent=comp150169_c0_seq1.mrna1
Chr2	gffcl	locus	119766163	119837289	.	-	.	ID=RLOC_00021045;geneIDs=FBgn0013759.1.path1;transcripts=FBgn0013759.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	119766163	119837289	.	-	.	ID=FBgn0013759.1.mrna1;geneID=FBgn0013759.1.path1;Name=FBgn0013759.1;Dir=sensecoverage=100.0;identity=100.0;matches=2772;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021045
Chr2	stalkie_big_nohaplotig	exon	119766163	119766339	100	-	.	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 2596 2772 +
Chr2	stalkie_big_nohaplotig	exon	119771894	119772069	100	-	.	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 2420 2595 +
Chr2	stalkie_big_nohaplotig	exon	119772141	119772248	100	-	.	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 2312 2419 +
Chr2	stalkie_big_nohaplotig	exon	119772320	119772442	100	-	.	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 2189 2311 +
Chr2	stalkie_big_nohaplotig	exon	119772517	119772636	100	-	.	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 2069 2188 +
Chr2	stalkie_big_nohaplotig	exon	119776115	119776168	100	-	.	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 2015 2068 +
Chr2	stalkie_big_nohaplotig	exon	119776738	119776876	100	-	.	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 1876 2014 +
Chr2	stalkie_big_nohaplotig	exon	119776945	119777043	100	-	.	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 1777 1875 +
Chr2	stalkie_big_nohaplotig	exon	119779584	119779652	100	-	.	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 1708 1776 +
Chr2	stalkie_big_nohaplotig	exon	119779764	119779928	100	-	.	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 1543 1707 +
Chr2	stalkie_big_nohaplotig	exon	119780023	119780208	100	-	.	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 1357 1542 +
Chr2	stalkie_big_nohaplotig	exon	119833269	119833430	100	-	.	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 1195 1356 +
Chr2	stalkie_big_nohaplotig	exon	119833491	119833669	100	-	.	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 1016 1194 +
Chr2	stalkie_big_nohaplotig	exon	119833734	119833881	100	-	.	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 868 1015 +
Chr2	stalkie_big_nohaplotig	exon	119833937	119834059	100	-	.	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 745 867 +
Chr2	stalkie_big_nohaplotig	exon	119834123	119834298	100	-	.	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 569 744 +
Chr2	stalkie_big_nohaplotig	exon	119834372	119834553	100	-	.	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 387 568 +
Chr2	stalkie_big_nohaplotig	exon	119834618	119834695	100	-	.	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 309 386 +
Chr2	stalkie_big_nohaplotig	exon	119834781	119834886	100	-	.	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 203 308 +
Chr2	stalkie_big_nohaplotig	exon	119836948	119837060	100	-	.	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 90 202 +
Chr2	stalkie_big_nohaplotig	exon	119837201	119837289	100	-	.	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 1 89 +
Chr2	stalkie_big_nohaplotig	CDS	119766163	119766339	.	-	0	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 2596 2772 +
Chr2	stalkie_big_nohaplotig	CDS	119771894	119772069	.	-	2	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 2420 2595 +
Chr2	stalkie_big_nohaplotig	CDS	119772141	119772248	.	-	2	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 2312 2419 +
Chr2	stalkie_big_nohaplotig	CDS	119772320	119772442	.	-	2	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 2189 2311 +
Chr2	stalkie_big_nohaplotig	CDS	119772517	119772636	.	-	2	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 2069 2188 +
Chr2	stalkie_big_nohaplotig	CDS	119776115	119776168	.	-	2	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 2015 2068 +
Chr2	stalkie_big_nohaplotig	CDS	119776738	119776876	.	-	0	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 1876 2014 +
Chr2	stalkie_big_nohaplotig	CDS	119776945	119777043	.	-	0	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 1777 1875 +
Chr2	stalkie_big_nohaplotig	CDS	119779584	119779652	.	-	0	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 1708 1776 +
Chr2	stalkie_big_nohaplotig	CDS	119779764	119779928	.	-	0	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 1543 1707 +
Chr2	stalkie_big_nohaplotig	CDS	119780023	119780208	.	-	0	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 1357 1542 +
Chr2	stalkie_big_nohaplotig	CDS	119833269	119833430	.	-	0	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 1195 1356 +
Chr2	stalkie_big_nohaplotig	CDS	119833491	119833669	.	-	2	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 1016 1194 +
Chr2	stalkie_big_nohaplotig	CDS	119833734	119833881	.	-	0	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 868 1015 +
Chr2	stalkie_big_nohaplotig	CDS	119833937	119834059	.	-	0	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 745 867 +
Chr2	stalkie_big_nohaplotig	CDS	119834123	119834298	.	-	2	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 569 744 +
Chr2	stalkie_big_nohaplotig	CDS	119834372	119834553	.	-	1	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 387 568 +
Chr2	stalkie_big_nohaplotig	CDS	119834618	119834695	.	-	1	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 309 386 +
Chr2	stalkie_big_nohaplotig	CDS	119834781	119834886	.	-	2	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 203 308 +
Chr2	stalkie_big_nohaplotig	CDS	119836948	119837060	.	-	1	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 90 202 +
Chr2	stalkie_big_nohaplotig	CDS	119837201	119837289	.	-	0	Parent=FBgn0013759.1.mrna1;Target=FBgn0013759.1 1 89 +
Chr2	gffcl	locus	119773069	119774681	.	-	.	ID=RLOC_00021046;geneIDs=comp149314_c0_seq1.path1;transcripts=comp149314_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	119773069	119774681	.	-	.	ID=comp149314_c0_seq1.mrna1;geneID=comp149314_c0_seq1.path1;Name=comp149314_c0_seq1;Dir=sensecoverage=98.7;identity=95.3;matches=368;mismatches=18;indels=0;unknowns=0;Target=comp149314_c0_seq1 7 93 +;locus=RLOC_00021046
Chr2	stalkie_big_nohaplotig	exon	119773069	119773276	93	-	.	Parent=comp149314_c0_seq1.mrna1;Target=comp149314_c0_seq1 184 391 +
Chr2	stalkie_big_nohaplotig	exon	119774504	119774681	97	-	.	Parent=comp149314_c0_seq1.mrna1;Target=comp149314_c0_seq1 6 183 +
Chr2	stalkie_big_nohaplotig	CDS	119774594	119774680	.	-	0	Parent=comp149314_c0_seq1.mrna1
Chr2	gffcl	locus	119997908	119999005	.	-	.	ID=RLOC_00021048;geneIDs=FBgn0023495.2.path2;transcripts=FBgn0023495.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	119997908	119999005	.	-	.	ID=FBgn0023495.2.mrna2;geneID=FBgn0023495.2.path2;Name=FBgn0023495.2;Dir=sensecoverage=71.0;identity=99.6;matches=889;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021048
Chr2	stalkie_big_nohaplotig	exon	119997908	119998294	100	-	.	Parent=FBgn0023495.2.mrna2;Target=FBgn0023495.2 871 1257 +
Chr2	stalkie_big_nohaplotig	exon	119998500	119999005	99	-	.	Parent=FBgn0023495.2.mrna2;Target=FBgn0023495.2 365 870 +
Chr2	stalkie_big_nohaplotig	CDS	119997908	119998294	.	-	2	Parent=FBgn0023495.2.mrna2;Target=FBgn0023495.2 871 1257 +
Chr2	stalkie_big_nohaplotig	CDS	119998500	119999005	.	-	1	Parent=FBgn0023495.2.mrna2;Target=FBgn0023495.2 365 870 +
Chr2	gffcl	locus	120001501	120002393	.	-	.	ID=RLOC_00021049;geneIDs=FBgn0031533.1.path1;transcripts=FBgn0031533.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120001501	120002393	.	-	.	ID=FBgn0031533.1.mrna1;geneID=FBgn0031533.1.path1;Name=FBgn0031533.1;Dir=sensecoverage=100.0;identity=100.0;matches=804;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021049
Chr2	stalkie_big_nohaplotig	exon	120001501	120001896	100	-	.	Parent=FBgn0031533.1.mrna1;Target=FBgn0031533.1 409 804 +
Chr2	stalkie_big_nohaplotig	exon	120001986	120002393	100	-	.	Parent=FBgn0031533.1.mrna1;Target=FBgn0031533.1 1 408 +
Chr2	stalkie_big_nohaplotig	CDS	120001501	120001896	.	-	0	Parent=FBgn0031533.1.mrna1;Target=FBgn0031533.1 409 804 +
Chr2	stalkie_big_nohaplotig	CDS	120001986	120002393	.	-	0	Parent=FBgn0031533.1.mrna1;Target=FBgn0031533.1 1 408 +
Chr2	gffcl	locus	120003261	120005207	.	-	.	ID=RLOC_00021050;geneIDs=FBgn0031533.2.path1;transcripts=FBgn0031533.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120003261	120005207	.	-	.	ID=FBgn0031533.2.mrna1;geneID=FBgn0031533.2.path1;Name=FBgn0031533.2;Dir=sensecoverage=100.0;identity=100.0;matches=1272;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021050
Chr2	stalkie_big_nohaplotig	exon	120003261	120003653	100	-	.	Parent=FBgn0031533.2.mrna1;Target=FBgn0031533.2 880 1272 +
Chr2	stalkie_big_nohaplotig	exon	120004258	120004983	100	-	.	Parent=FBgn0031533.2.mrna1;Target=FBgn0031533.2 154 879 +
Chr2	stalkie_big_nohaplotig	exon	120005055	120005207	100	-	.	Parent=FBgn0031533.2.mrna1;Target=FBgn0031533.2 1 153 +
Chr2	stalkie_big_nohaplotig	CDS	120003261	120003653	.	-	0	Parent=FBgn0031533.2.mrna1;Target=FBgn0031533.2 880 1272 +
Chr2	stalkie_big_nohaplotig	CDS	120004258	120004983	.	-	0	Parent=FBgn0031533.2.mrna1;Target=FBgn0031533.2 154 879 +
Chr2	stalkie_big_nohaplotig	CDS	120005055	120005207	.	-	0	Parent=FBgn0031533.2.mrna1;Target=FBgn0031533.2 1 153 +
Chr2	gffcl	locus	120005517	120007374	.	-	.	ID=RLOC_00021051;geneIDs=FBgn0036996.1.path1;transcripts=FBgn0036996.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120005517	120007374	.	-	.	ID=FBgn0036996.1.mrna1;geneID=FBgn0036996.1.path1;Name=FBgn0036996.1;Dir=sensecoverage=100.0;identity=100.0;matches=1236;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021051
Chr2	stalkie_big_nohaplotig	exon	120005517	120005891	100	-	.	Parent=FBgn0036996.1.mrna1;Target=FBgn0036996.1 862 1236 +
Chr2	stalkie_big_nohaplotig	exon	120006462	120007187	100	-	.	Parent=FBgn0036996.1.mrna1;Target=FBgn0036996.1 136 861 +
Chr2	stalkie_big_nohaplotig	exon	120007240	120007374	100	-	.	Parent=FBgn0036996.1.mrna1;Target=FBgn0036996.1 1 135 +
Chr2	stalkie_big_nohaplotig	CDS	120005517	120005891	.	-	0	Parent=FBgn0036996.1.mrna1;Target=FBgn0036996.1 862 1236 +
Chr2	stalkie_big_nohaplotig	CDS	120006462	120007187	.	-	0	Parent=FBgn0036996.1.mrna1;Target=FBgn0036996.1 136 861 +
Chr2	stalkie_big_nohaplotig	CDS	120007240	120007374	.	-	0	Parent=FBgn0036996.1.mrna1;Target=FBgn0036996.1 1 135 +
Chr2	gffcl	locus	120007664	120012680	.	-	.	ID=RLOC_00021052;geneIDs=FBgn0260444.1.path1,comp159475_c1_seq1.path1;transcripts=comp159475_c1_seq1.mrna1,FBgn0260444.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120007664	120012680	.	-	.	ID=comp159475_c1_seq1.mrna1;geneID=comp159475_c1_seq1.path1;Name=comp159475_c1_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=2520;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021052
Chr2	stalkie_big_nohaplotig	exon	120007664	120008134	100	-	.	Parent=comp159475_c1_seq1.mrna1;Target=comp159475_c1_seq1 1 471 -
Chr2	stalkie_big_nohaplotig	exon	120008198	120008499	100	-	.	Parent=comp159475_c1_seq1.mrna1;Target=comp159475_c1_seq1 472 773 -
Chr2	stalkie_big_nohaplotig	exon	120008556	120008888	100	-	.	Parent=comp159475_c1_seq1.mrna1;Target=comp159475_c1_seq1 774 1106 -
Chr2	stalkie_big_nohaplotig	exon	120008949	120009049	100	-	.	Parent=comp159475_c1_seq1.mrna1;Target=comp159475_c1_seq1 1107 1207 -
Chr2	stalkie_big_nohaplotig	exon	120009125	120009452	100	-	.	Parent=comp159475_c1_seq1.mrna1;Target=comp159475_c1_seq1 1208 1535 -
Chr2	stalkie_big_nohaplotig	exon	120009509	120009615	100	-	.	Parent=comp159475_c1_seq1.mrna1;Target=comp159475_c1_seq1 1536 1642 -
Chr2	stalkie_big_nohaplotig	exon	120009673	120010053	100	-	.	Parent=comp159475_c1_seq1.mrna1;Target=comp159475_c1_seq1 1643 2023 -
Chr2	stalkie_big_nohaplotig	exon	120012184	120012680	100	-	.	Parent=comp159475_c1_seq1.mrna1;Target=comp159475_c1_seq1 2024 2520 -
Chr2	stalkie_big_nohaplotig	CDS	120008109	120008134	.	-	2	Parent=comp159475_c1_seq1.mrna1;Target=comp159475_c1_seq1 446 471 .
Chr2	stalkie_big_nohaplotig	CDS	120008198	120008499	.	-	1	Parent=comp159475_c1_seq1.mrna1;Target=comp159475_c1_seq1 472 773 .
Chr2	stalkie_big_nohaplotig	CDS	120008556	120008888	.	-	1	Parent=comp159475_c1_seq1.mrna1;Target=comp159475_c1_seq1 774 1106 .
Chr2	stalkie_big_nohaplotig	CDS	120008949	120009049	.	-	0	Parent=comp159475_c1_seq1.mrna1;Target=comp159475_c1_seq1 1107 1207 .
Chr2	stalkie_big_nohaplotig	CDS	120009125	120009452	.	-	1	Parent=comp159475_c1_seq1.mrna1;Target=comp159475_c1_seq1 1208 1535 .
Chr2	stalkie_big_nohaplotig	CDS	120009509	120009615	.	-	0	Parent=comp159475_c1_seq1.mrna1;Target=comp159475_c1_seq1 1536 1642 .
Chr2	stalkie_big_nohaplotig	CDS	120009673	120009876	.	-	0	Parent=comp159475_c1_seq1.mrna1;Target=comp159475_c1_seq1 1643 1846 .
Chr2	stalkie_big_nohaplotig	mRNA	120008198	120012495	.	-	.	ID=FBgn0260444.1.mrna1;geneID=FBgn0260444.1.path1;Name=FBgn0260444.1;Dir=sensecoverage=98.7;identity=100.0;matches=1807;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021052
Chr2	stalkie_big_nohaplotig	exon	120008198	120008499	100	-	.	Parent=FBgn0260444.1.mrna1;Target=FBgn0260444.1 1506 1807 +
Chr2	stalkie_big_nohaplotig	exon	120008556	120008888	100	-	.	Parent=FBgn0260444.1.mrna1;Target=FBgn0260444.1 1173 1505 +
Chr2	stalkie_big_nohaplotig	exon	120008949	120009049	100	-	.	Parent=FBgn0260444.1.mrna1;Target=FBgn0260444.1 1072 1172 +
Chr2	stalkie_big_nohaplotig	exon	120009125	120009452	100	-	.	Parent=FBgn0260444.1.mrna1;Target=FBgn0260444.1 744 1071 +
Chr2	stalkie_big_nohaplotig	exon	120009509	120009615	100	-	.	Parent=FBgn0260444.1.mrna1;Target=FBgn0260444.1 637 743 +
Chr2	stalkie_big_nohaplotig	exon	120009673	120010053	100	-	.	Parent=FBgn0260444.1.mrna1;Target=FBgn0260444.1 256 636 +
Chr2	stalkie_big_nohaplotig	exon	120012184	120012349	100	-	.	Parent=FBgn0260444.1.mrna1;Target=FBgn0260444.1 90 255 +
Chr2	stalkie_big_nohaplotig	exon	120012407	120012495	100	-	.	Parent=FBgn0260444.1.mrna1;Target=FBgn0260444.1 1 89 +
Chr2	stalkie_big_nohaplotig	CDS	120008199	120008499	.	-	1	Parent=FBgn0260444.1.mrna1;Target=FBgn0260444.1 1506 1806 +
Chr2	stalkie_big_nohaplotig	CDS	120008556	120008888	.	-	1	Parent=FBgn0260444.1.mrna1;Target=FBgn0260444.1 1173 1505 +
Chr2	stalkie_big_nohaplotig	CDS	120008949	120009049	.	-	0	Parent=FBgn0260444.1.mrna1;Target=FBgn0260444.1 1072 1172 +
Chr2	stalkie_big_nohaplotig	CDS	120009125	120009452	.	-	1	Parent=FBgn0260444.1.mrna1;Target=FBgn0260444.1 744 1071 +
Chr2	stalkie_big_nohaplotig	CDS	120009509	120009615	.	-	0	Parent=FBgn0260444.1.mrna1;Target=FBgn0260444.1 637 743 +
Chr2	stalkie_big_nohaplotig	CDS	120009673	120010053	.	-	0	Parent=FBgn0260444.1.mrna1;Target=FBgn0260444.1 256 636 +
Chr2	stalkie_big_nohaplotig	CDS	120012184	120012349	.	-	1	Parent=FBgn0260444.1.mrna1;Target=FBgn0260444.1 90 255 +
Chr2	stalkie_big_nohaplotig	CDS	120012407	120012495	.	-	0	Parent=FBgn0260444.1.mrna1;Target=FBgn0260444.1 1 89 +
Chr2	gffcl	locus	120014632	120015693	.	-	.	ID=RLOC_00021053;geneIDs=FBgn0038065.1.path1;transcripts=FBgn0038065.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120014632	120015693	.	-	.	ID=FBgn0038065.1.mrna1;geneID=FBgn0038065.1.path1;Name=FBgn0038065.1;Dir=sensecoverage=100.0;identity=99.8;matches=455;mismatches=0;indels=1;unknowns=0;Target=FBgn0038065.1 3 62 +;locus=RLOC_00021053
Chr2	stalkie_big_nohaplotig	exon	120014632	120014859	100	-	.	Parent=FBgn0038065.1.mrna1;Target=FBgn0038065.1 229 456 +
Chr2	stalkie_big_nohaplotig	exon	120014938	120015033	100	-	.	Parent=FBgn0038065.1.mrna1;Target=FBgn0038065.1 133 228 +
Chr2	stalkie_big_nohaplotig	exon	120015563	120015693	99	-	.	Parent=FBgn0038065.1.mrna1;Target=FBgn0038065.1 1 132 +
Chr2	stalkie_big_nohaplotig	CDS	120015633	120015691	.	-	0	Parent=FBgn0038065.1.mrna1
Chr2	gffcl	locus	120020023	120020936	.	-	.	ID=RLOC_00021054;geneIDs=FBgn0038983.1.path1;transcripts=FBgn0038983.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120020023	120020936	.	-	.	ID=FBgn0038983.1.mrna1;geneID=FBgn0038983.1.path1;Name=FBgn0038983.1;Dir=sensecoverage=94.0;identity=99.5;matches=629;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021054
Chr2	stalkie_big_nohaplotig	exon	120020023	120020132	100	-	.	Parent=FBgn0038983.1.mrna1;Target=FBgn0038983.1 563 672 +
Chr2	stalkie_big_nohaplotig	exon	120020221	120020383	98	-	.	Parent=FBgn0038983.1.mrna1;Target=FBgn0038983.1 400 562 +
Chr2	stalkie_big_nohaplotig	exon	120020448	120020528	100	-	.	Parent=FBgn0038983.1.mrna1;Target=FBgn0038983.1 319 399 +
Chr2	stalkie_big_nohaplotig	exon	120020659	120020936	99	-	.	Parent=FBgn0038983.1.mrna1;Target=FBgn0038983.1 41 318 +
Chr2	stalkie_big_nohaplotig	CDS	120020023	120020132	.	-	2	Parent=FBgn0038983.1.mrna1;Target=FBgn0038983.1 563 672 +
Chr2	stalkie_big_nohaplotig	CDS	120020221	120020383	.	-	0	Parent=FBgn0038983.1.mrna1;Target=FBgn0038983.1 400 562 +
Chr2	stalkie_big_nohaplotig	CDS	120020448	120020528	.	-	0	Parent=FBgn0038983.1.mrna1;Target=FBgn0038983.1 319 399 +
Chr2	stalkie_big_nohaplotig	CDS	120020659	120020934	.	-	0	Parent=FBgn0038983.1.mrna1;Target=FBgn0038983.1 43 318 +
Chr2	gffcl	locus	120073634	120074273	.	-	.	ID=RLOC_00021055;geneIDs=comp136320_c0_seq1.path1;transcripts=comp136320_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120073634	120074273	.	-	.	ID=comp136320_c0_seq1.mrna1;geneID=comp136320_c0_seq1.path1;Name=comp136320_c0_seq1;Dir=indeterminatecoverage=100.0;identity=89.2;matches=572;mismatches=22;indels=47;unknowns=0;Target=comp136320_c0_seq1 595 1 .;CDS_Target=comp136320_c0_seq1 201 103 .;locus=RLOC_00021055
Chr2	stalkie_big_nohaplotig	exon	120073634	120074273	89	-	.	Parent=comp136320_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	120074060	120074158	.	-	0	Parent=comp136320_c0_seq1.mrna1
Chr2	gffcl	locus	120074300	120074825	.	-	.	ID=RLOC_00021056;geneIDs=comp97777_c0_seq1.path1;transcripts=comp97777_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120074300	120074825	.	-	.	ID=comp97777_c0_seq1.mrna1;geneID=comp97777_c0_seq1.path1;Name=comp97777_c0_seq1;Dir=indeterminatecoverage=98.9;identity=95.0;matches=509;mismatches=13;indels=14;unknowns=0;Target=comp97777_c0_seq1 533 2 .;CDS_Target=comp97777_c0_seq1 368 240 .;locus=RLOC_00021056
Chr2	stalkie_big_nohaplotig	exon	120074300	120074825	94	-	.	Parent=comp97777_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	120074469	120074594	.	-	0	Parent=comp97777_c0_seq1.mrna1
Chr2	gffcl	locus	120075989	120079455	.	-	.	ID=RLOC_00021057;geneIDs=FBgn0038984.1.path1;transcripts=FBgn0038984.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120075989	120079455	.	-	.	ID=FBgn0038984.1.mrna1;geneID=FBgn0038984.1.path1;Name=FBgn0038984.1;Dir=sensecoverage=100.0;identity=100.0;matches=1296;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021057
Chr2	stalkie_big_nohaplotig	exon	120075989	120076120	100	-	.	Parent=FBgn0038984.1.mrna1;Target=FBgn0038984.1 1165 1296 +
Chr2	stalkie_big_nohaplotig	exon	120076184	120076263	100	-	.	Parent=FBgn0038984.1.mrna1;Target=FBgn0038984.1 1085 1164 +
Chr2	stalkie_big_nohaplotig	exon	120076332	120076624	100	-	.	Parent=FBgn0038984.1.mrna1;Target=FBgn0038984.1 792 1084 +
Chr2	stalkie_big_nohaplotig	exon	120076699	120077051	100	-	.	Parent=FBgn0038984.1.mrna1;Target=FBgn0038984.1 439 791 +
Chr2	stalkie_big_nohaplotig	exon	120077303	120077401	100	-	.	Parent=FBgn0038984.1.mrna1;Target=FBgn0038984.1 340 438 +
Chr2	stalkie_big_nohaplotig	exon	120079117	120079455	100	-	.	Parent=FBgn0038984.1.mrna1;Target=FBgn0038984.1 1 339 +
Chr2	stalkie_big_nohaplotig	CDS	120075989	120076120	.	-	0	Parent=FBgn0038984.1.mrna1;Target=FBgn0038984.1 1165 1296 +
Chr2	stalkie_big_nohaplotig	CDS	120076184	120076263	.	-	2	Parent=FBgn0038984.1.mrna1;Target=FBgn0038984.1 1085 1164 +
Chr2	stalkie_big_nohaplotig	CDS	120076332	120076624	.	-	1	Parent=FBgn0038984.1.mrna1;Target=FBgn0038984.1 792 1084 +
Chr2	stalkie_big_nohaplotig	CDS	120076699	120077051	.	-	0	Parent=FBgn0038984.1.mrna1;Target=FBgn0038984.1 439 791 +
Chr2	stalkie_big_nohaplotig	CDS	120077303	120077401	.	-	0	Parent=FBgn0038984.1.mrna1;Target=FBgn0038984.1 340 438 +
Chr2	stalkie_big_nohaplotig	CDS	120079117	120079455	.	-	0	Parent=FBgn0038984.1.mrna1;Target=FBgn0038984.1 1 339 +
Chr2	gffcl	locus	120079768	120079967	.	-	.	ID=RLOC_00021058;geneIDs=comp149458_c0_seq1.path1;transcripts=comp149458_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120079768	120079967	.	-	.	ID=comp149458_c0_seq1.mrna1;geneID=comp149458_c0_seq1.path1;Name=comp149458_c0_seq1;Dir=indeterminatecoverage=19.3;identity=83.0;matches=166;mismatches=9;indels=25;unknowns=0;Target=comp149458_c0_seq1 195 21 .;locus=RLOC_00021058
Chr2	stalkie_big_nohaplotig	exon	120079768	120079967	83	-	.	Parent=comp149458_c0_seq1.mrna1
Chr2	gffcl	locus	120086523	120087486	.	-	.	ID=RLOC_00021059;geneIDs=comp81277_c0_seq1.path1;transcripts=comp81277_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120086523	120087486	.	-	.	ID=comp81277_c0_seq1.mrna1;geneID=comp81277_c0_seq1.path1;Name=comp81277_c0_seq1;Dir=sensecoverage=100.0;identity=96.4;matches=883;mismatches=18;indels=15;unknowns=0;Target=comp81277_c0_seq1 463 546 +;locus=RLOC_00021059
Chr2	stalkie_big_nohaplotig	exon	120086523	120086535	100	-	.	Parent=comp81277_c0_seq1.mrna1;Target=comp81277_c0_seq1 896 908 +
Chr2	stalkie_big_nohaplotig	exon	120086591	120087486	96	-	.	Parent=comp81277_c0_seq1.mrna1;Target=comp81277_c0_seq1 1 895 +
Chr2	stalkie_big_nohaplotig	CDS	120086940	120087023	.	-	0	Parent=comp81277_c0_seq1.mrna1
Chr2	gffcl	locus	120087560	120088340	.	-	.	ID=RLOC_00021060;geneIDs=comp149458_c0_seq1.path2;transcripts=comp149458_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	120087560	120088340	.	-	.	ID=comp149458_c0_seq1.mrna2;geneID=comp149458_c0_seq1.path2;Name=comp149458_c0_seq1;Dir=sensecoverage=78.5;identity=96.7;matches=697;mismatches=13;indels=11;unknowns=0;Target=comp149458_c0_seq1 356 463 +;locus=RLOC_00021060
Chr2	stalkie_big_nohaplotig	exon	120087560	120088208	97	-	.	Parent=comp149458_c0_seq1.mrna2;Target=comp149458_c0_seq1 264 906 +
Chr2	stalkie_big_nohaplotig	exon	120088270	120088340	91	-	.	Parent=comp149458_c0_seq1.mrna2;Target=comp149458_c0_seq1 196 263 +
Chr2	stalkie_big_nohaplotig	CDS	120088009	120088116	.	-	0	Parent=comp149458_c0_seq1.mrna2
Chr2	gffcl	locus	120106830	120108023	.	+	.	ID=RLOC_00021061;geneIDs=FBgn0260942.1.path1;transcripts=FBgn0260942.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120106830	120108023	.	+	.	ID=FBgn0260942.1.mrna1;geneID=FBgn0260942.1.path1;Name=FBgn0260942.1;Dir=sensecoverage=100.0;identity=100.0;matches=936;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021061
Chr2	stalkie_big_nohaplotig	exon	120106830	120106899	100	+	.	Parent=FBgn0260942.1.mrna1;Target=FBgn0260942.1 1 70 +
Chr2	stalkie_big_nohaplotig	exon	120106975	120107165	100	+	.	Parent=FBgn0260942.1.mrna1;Target=FBgn0260942.1 71 261 +
Chr2	stalkie_big_nohaplotig	exon	120107275	120107518	100	+	.	Parent=FBgn0260942.1.mrna1;Target=FBgn0260942.1 262 505 +
Chr2	stalkie_big_nohaplotig	exon	120107593	120108023	100	+	.	Parent=FBgn0260942.1.mrna1;Target=FBgn0260942.1 506 936 +
Chr2	stalkie_big_nohaplotig	CDS	120106830	120106899	.	+	0	Parent=FBgn0260942.1.mrna1;Target=FBgn0260942.1 1 70 +
Chr2	stalkie_big_nohaplotig	CDS	120106975	120107165	.	+	2	Parent=FBgn0260942.1.mrna1;Target=FBgn0260942.1 71 261 +
Chr2	stalkie_big_nohaplotig	CDS	120107275	120107518	.	+	0	Parent=FBgn0260942.1.mrna1;Target=FBgn0260942.1 262 505 +
Chr2	stalkie_big_nohaplotig	CDS	120107593	120108023	.	+	2	Parent=FBgn0260942.1.mrna1;Target=FBgn0260942.1 506 936 +
Chr2	gffcl	locus	120185101	120185520	.	+	.	ID=RLOC_00021063;geneIDs=comp135520_c0_seq1.path1;transcripts=comp135520_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120185101	120185520	.	+	.	ID=comp135520_c0_seq1.mrna1;geneID=comp135520_c0_seq1.path1;Name=comp135520_c0_seq1;Dir=indeterminatecoverage=95.0;identity=98.8;matches=415;mismatches=4;indels=1;unknowns=0;Target=comp135520_c0_seq1 441 23 .;CDS_Target=comp135520_c0_seq1 339 166 .;locus=RLOC_00021063
Chr2	stalkie_big_nohaplotig	exon	120185101	120185520	98	+	.	Parent=comp135520_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	120185244	120185417	.	+	0	Parent=comp135520_c0_seq1.mrna1
Chr2	gffcl	locus	120210162	120214247	.	+	.	ID=RLOC_00021064;geneIDs=FBgn0038167.1.path1;transcripts=FBgn0038167.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120210162	120214247	.	+	.	ID=FBgn0038167.1.mrna1;geneID=FBgn0038167.1.path1;Name=FBgn0038167.1;Dir=sensecoverage=100.0;identity=100.0;matches=1623;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021064
Chr2	stalkie_big_nohaplotig	exon	120210162	120210854	100	+	.	Parent=FBgn0038167.1.mrna1;Target=FBgn0038167.1 1 693 +
Chr2	stalkie_big_nohaplotig	exon	120210912	120211234	100	+	.	Parent=FBgn0038167.1.mrna1;Target=FBgn0038167.1 694 1016 +
Chr2	stalkie_big_nohaplotig	exon	120211288	120211482	100	+	.	Parent=FBgn0038167.1.mrna1;Target=FBgn0038167.1 1017 1211 +
Chr2	stalkie_big_nohaplotig	exon	120211548	120211711	100	+	.	Parent=FBgn0038167.1.mrna1;Target=FBgn0038167.1 1212 1375 +
Chr2	stalkie_big_nohaplotig	exon	120214000	120214247	100	+	.	Parent=FBgn0038167.1.mrna1;Target=FBgn0038167.1 1376 1623 +
Chr2	stalkie_big_nohaplotig	CDS	120210162	120210854	.	+	0	Parent=FBgn0038167.1.mrna1;Target=FBgn0038167.1 1 693 +
Chr2	stalkie_big_nohaplotig	CDS	120210912	120211234	.	+	0	Parent=FBgn0038167.1.mrna1;Target=FBgn0038167.1 694 1016 +
Chr2	stalkie_big_nohaplotig	CDS	120211288	120211482	.	+	1	Parent=FBgn0038167.1.mrna1;Target=FBgn0038167.1 1017 1211 +
Chr2	stalkie_big_nohaplotig	CDS	120211548	120211711	.	+	1	Parent=FBgn0038167.1.mrna1;Target=FBgn0038167.1 1212 1375 +
Chr2	stalkie_big_nohaplotig	CDS	120214000	120214247	.	+	2	Parent=FBgn0038167.1.mrna1;Target=FBgn0038167.1 1376 1623 +
Chr2	gffcl	locus	120214845	120218845	.	-	.	ID=RLOC_00021065;geneIDs=FBgn0038168.1.path1;transcripts=FBgn0038168.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120214845	120218845	.	-	.	ID=FBgn0038168.1.mrna1;geneID=FBgn0038168.1.path1;Name=FBgn0038168.1;Dir=sensecoverage=100.0;identity=100.0;matches=2979;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021065
Chr2	stalkie_big_nohaplotig	exon	120214845	120215120	100	-	.	Parent=FBgn0038168.1.mrna1;Target=FBgn0038168.1 2704 2979 +
Chr2	stalkie_big_nohaplotig	exon	120215199	120215341	100	-	.	Parent=FBgn0038168.1.mrna1;Target=FBgn0038168.1 2561 2703 +
Chr2	stalkie_big_nohaplotig	exon	120215404	120215683	100	-	.	Parent=FBgn0038168.1.mrna1;Target=FBgn0038168.1 2281 2560 +
Chr2	stalkie_big_nohaplotig	exon	120216198	120216565	100	-	.	Parent=FBgn0038168.1.mrna1;Target=FBgn0038168.1 1913 2280 +
Chr2	stalkie_big_nohaplotig	exon	120216632	120216689	100	-	.	Parent=FBgn0038168.1.mrna1;Target=FBgn0038168.1 1855 1912 +
Chr2	stalkie_big_nohaplotig	exon	120216752	120217139	100	-	.	Parent=FBgn0038168.1.mrna1;Target=FBgn0038168.1 1467 1854 +
Chr2	stalkie_big_nohaplotig	exon	120217192	120217459	100	-	.	Parent=FBgn0038168.1.mrna1;Target=FBgn0038168.1 1199 1466 +
Chr2	stalkie_big_nohaplotig	exon	120217531	120217875	100	-	.	Parent=FBgn0038168.1.mrna1;Target=FBgn0038168.1 854 1198 +
Chr2	stalkie_big_nohaplotig	exon	120217932	120218252	100	-	.	Parent=FBgn0038168.1.mrna1;Target=FBgn0038168.1 533 853 +
Chr2	stalkie_big_nohaplotig	exon	120218314	120218845	100	-	.	Parent=FBgn0038168.1.mrna1;Target=FBgn0038168.1 1 532 +
Chr2	stalkie_big_nohaplotig	CDS	120214845	120215120	.	-	0	Parent=FBgn0038168.1.mrna1;Target=FBgn0038168.1 2704 2979 +
Chr2	stalkie_big_nohaplotig	CDS	120215199	120215341	.	-	2	Parent=FBgn0038168.1.mrna1;Target=FBgn0038168.1 2561 2703 +
Chr2	stalkie_big_nohaplotig	CDS	120215404	120215683	.	-	0	Parent=FBgn0038168.1.mrna1;Target=FBgn0038168.1 2281 2560 +
Chr2	stalkie_big_nohaplotig	CDS	120216198	120216565	.	-	2	Parent=FBgn0038168.1.mrna1;Target=FBgn0038168.1 1913 2280 +
Chr2	stalkie_big_nohaplotig	CDS	120216632	120216689	.	-	0	Parent=FBgn0038168.1.mrna1;Target=FBgn0038168.1 1855 1912 +
Chr2	stalkie_big_nohaplotig	CDS	120216752	120217139	.	-	1	Parent=FBgn0038168.1.mrna1;Target=FBgn0038168.1 1467 1854 +
Chr2	stalkie_big_nohaplotig	CDS	120217192	120217459	.	-	2	Parent=FBgn0038168.1.mrna1;Target=FBgn0038168.1 1199 1466 +
Chr2	stalkie_big_nohaplotig	CDS	120217531	120217875	.	-	2	Parent=FBgn0038168.1.mrna1;Target=FBgn0038168.1 854 1198 +
Chr2	stalkie_big_nohaplotig	CDS	120217932	120218252	.	-	2	Parent=FBgn0038168.1.mrna1;Target=FBgn0038168.1 533 853 +
Chr2	stalkie_big_nohaplotig	CDS	120218314	120218845	.	-	0	Parent=FBgn0038168.1.mrna1;Target=FBgn0038168.1 1 532 +
Chr2	gffcl	locus	120221164	120236426	.	+	.	ID=RLOC_00021066;geneIDs=comp280622_c0_seq1.path1;transcripts=comp280622_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120221164	120236426	.	+	.	ID=comp280622_c0_seq1.mrna1;geneID=comp280622_c0_seq1.path1;Name=comp280622_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=919;mismatches=6;indels=0;unknowns=0;locus=RLOC_00021066
Chr2	stalkie_big_nohaplotig	exon	120221164	120221279	94	+	.	Parent=comp280622_c0_seq1.mrna1;Target=comp280622_c0_seq1 810 925 -
Chr2	stalkie_big_nohaplotig	exon	120235618	120236426	100	+	.	Parent=comp280622_c0_seq1.mrna1;Target=comp280622_c0_seq1 1 809 -
Chr2	stalkie_big_nohaplotig	CDS	120221211	120221279	.	+	0	Parent=comp280622_c0_seq1.mrna1;Target=comp280622_c0_seq1 810 878 .
Chr2	stalkie_big_nohaplotig	CDS	120235618	120235623	.	+	0	Parent=comp280622_c0_seq1.mrna1;Target=comp280622_c0_seq1 804 809 .
Chr2	gffcl	locus	120272336	120284163	.	+	.	ID=RLOC_00021067;geneIDs=FBgn0037534.1.path1;transcripts=FBgn0037534.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120272336	120284163	.	+	.	ID=FBgn0037534.1.mrna1;geneID=FBgn0037534.1.path1;Name=FBgn0037534.1;Dir=sensecoverage=97.9;identity=100.0;matches=972;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021067
Chr2	stalkie_big_nohaplotig	exon	120272336	120272473	100	+	.	Parent=FBgn0037534.1.mrna1;Target=FBgn0037534.1 22 159 +
Chr2	stalkie_big_nohaplotig	exon	120276878	120276985	100	+	.	Parent=FBgn0037534.1.mrna1;Target=FBgn0037534.1 160 267 +
Chr2	stalkie_big_nohaplotig	exon	120277397	120277477	100	+	.	Parent=FBgn0037534.1.mrna1;Target=FBgn0037534.1 268 348 +
Chr2	stalkie_big_nohaplotig	exon	120283445	120283906	100	+	.	Parent=FBgn0037534.1.mrna1;Target=FBgn0037534.1 349 810 +
Chr2	stalkie_big_nohaplotig	exon	120283981	120284163	100	+	.	Parent=FBgn0037534.1.mrna1;Target=FBgn0037534.1 811 993 +
Chr2	stalkie_big_nohaplotig	CDS	120272336	120272473	.	+	0	Parent=FBgn0037534.1.mrna1;Target=FBgn0037534.1 22 159 +
Chr2	stalkie_big_nohaplotig	CDS	120276878	120276985	.	+	0	Parent=FBgn0037534.1.mrna1;Target=FBgn0037534.1 160 267 +
Chr2	stalkie_big_nohaplotig	CDS	120277397	120277477	.	+	0	Parent=FBgn0037534.1.mrna1;Target=FBgn0037534.1 268 348 +
Chr2	stalkie_big_nohaplotig	CDS	120283445	120283906	.	+	0	Parent=FBgn0037534.1.mrna1;Target=FBgn0037534.1 349 810 +
Chr2	stalkie_big_nohaplotig	CDS	120283981	120284163	.	+	0	Parent=FBgn0037534.1.mrna1;Target=FBgn0037534.1 811 993 +
Chr2	gffcl	locus	120326432	120326803	.	+	.	ID=RLOC_00021069;geneIDs=comp113672_c0_seq1.path1;transcripts=comp113672_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120326432	120326803	.	+	.	ID=comp113672_c0_seq1.mrna1;geneID=comp113672_c0_seq1.path1;Name=comp113672_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.5;matches=371;mismatches=1;indels=1;unknowns=0;Target=comp113672_c0_seq1 374 2 .;CDS_Target=comp113672_c0_seq1 120 25 .;locus=RLOC_00021069
Chr2	stalkie_big_nohaplotig	exon	120326432	120326803	99	+	.	Parent=comp113672_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	120326455	120326550	.	+	0	Parent=comp113672_c0_seq1.mrna1
Chr2	gffcl	locus	120330330	120346815	.	-	.	ID=RLOC_00021070;geneIDs=comp176291_c0_seq1.path1;transcripts=comp176291_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120330330	120346815	.	-	.	ID=comp176291_c0_seq1.mrna1;geneID=comp176291_c0_seq1.path1;Name=comp176291_c0_seq1;Dir=sensecoverage=79.8;identity=96.0;matches=1000;mismatches=24;indels=18;unknowns=0;Target=comp176291_c0_seq1 1244 1342 +;locus=RLOC_00021070
Chr2	stalkie_big_nohaplotig	exon	120330330	120330816	99	-	.	Parent=comp176291_c0_seq1.mrna1;Target=comp176291_c0_seq1 882 1368 +
Chr2	stalkie_big_nohaplotig	exon	120332243	120332675	100	-	.	Parent=comp176291_c0_seq1.mrna1;Target=comp176291_c0_seq1 449 881 +
Chr2	stalkie_big_nohaplotig	exon	120334421	120334430	100	-	.	Parent=comp176291_c0_seq1.mrna1;Target=comp176291_c0_seq1 439 448 +
Chr2	stalkie_big_nohaplotig	exon	120334468	120334476	100	-	.	Parent=comp176291_c0_seq1.mrna1;Target=comp176291_c0_seq1 371 379 +
Chr2	stalkie_big_nohaplotig	exon	120339434	120339490	50	-	.	Parent=comp176291_c0_seq1.mrna1;Target=comp176291_c0_seq1 307 370 +
Chr2	stalkie_big_nohaplotig	exon	120340298	120340317	55	-	.	Parent=comp176291_c0_seq1.mrna1;Target=comp176291_c0_seq1 296 306 +
Chr2	stalkie_big_nohaplotig	exon	120341565	120341573	100	-	.	Parent=comp176291_c0_seq1.mrna1;Target=comp176291_c0_seq1 287 295 +
Chr2	stalkie_big_nohaplotig	exon	120346631	120346632	100	-	.	Parent=comp176291_c0_seq1.mrna1;Target=comp176291_c0_seq1 285 286 +
Chr2	stalkie_big_nohaplotig	exon	120346809	120346815	100	-	.	Parent=comp176291_c0_seq1.mrna1;Target=comp176291_c0_seq1 278 284 +
Chr2	stalkie_big_nohaplotig	CDS	120330356	120330454	.	-	0	Parent=comp176291_c0_seq1.mrna1
Chr2	gffcl	locus	120337157	120338070	.	-	.	ID=RLOC_00021071;geneIDs=comp140181_c0_seq1.path1;transcripts=comp140181_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120337157	120338070	.	-	.	ID=comp140181_c0_seq1.mrna1;geneID=comp140181_c0_seq1.path1;Name=comp140181_c0_seq1;Dir=sensecoverage=99.9;identity=99.9;matches=847;mismatches=1;indels=0;unknowns=0;Target=comp140181_c0_seq1 195 326 +;locus=RLOC_00021071
Chr2	stalkie_big_nohaplotig	exon	120337157	120337976	99	-	.	Parent=comp140181_c0_seq1.mrna1;Target=comp140181_c0_seq1 29 848 +
Chr2	stalkie_big_nohaplotig	exon	120338043	120338070	100	-	.	Parent=comp140181_c0_seq1.mrna1;Target=comp140181_c0_seq1 1 28 +
Chr2	stalkie_big_nohaplotig	CDS	120337679	120337810	.	-	0	Parent=comp140181_c0_seq1.mrna1
Chr2	gffcl	locus	120389845	120409426	.	+	.	ID=RLOC_00021072;geneIDs=FBgn0051522.1.path1,comp110171_c1_seq1.path1,comp156468_c0_seq1.path1;transcripts=FBgn0051522.1.mrna1,comp110171_c1_seq1.mrna1,comp156468_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120389845	120409426	.	+	.	ID=FBgn0051522.1.mrna1;geneID=FBgn0051522.1.path1;Name=FBgn0051522.1;Dir=sensecoverage=100.0;identity=100.0;matches=1134;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021072
Chr2	stalkie_big_nohaplotig	exon	120389845	120389926	100	+	.	Parent=FBgn0051522.1.mrna1;Target=FBgn0051522.1 1 82 +
Chr2	stalkie_big_nohaplotig	exon	120393666	120393748	100	+	.	Parent=FBgn0051522.1.mrna1;Target=FBgn0051522.1 83 165 +
Chr2	stalkie_big_nohaplotig	exon	120398391	120398498	100	+	.	Parent=FBgn0051522.1.mrna1;Target=FBgn0051522.1 166 273 +
Chr2	stalkie_big_nohaplotig	exon	120400906	120400989	100	+	.	Parent=FBgn0051522.1.mrna1;Target=FBgn0051522.1 274 357 +
Chr2	stalkie_big_nohaplotig	exon	120402320	120402376	100	+	.	Parent=FBgn0051522.1.mrna1;Target=FBgn0051522.1 358 414 +
Chr2	stalkie_big_nohaplotig	exon	120404317	120404422	100	+	.	Parent=FBgn0051522.1.mrna1;Target=FBgn0051522.1 415 520 +
Chr2	stalkie_big_nohaplotig	exon	120404502	120404638	100	+	.	Parent=FBgn0051522.1.mrna1;Target=FBgn0051522.1 521 657 +
Chr2	stalkie_big_nohaplotig	exon	120404708	120404863	100	+	.	Parent=FBgn0051522.1.mrna1;Target=FBgn0051522.1 658 813 +
Chr2	stalkie_big_nohaplotig	exon	120409106	120409426	100	+	.	Parent=FBgn0051522.1.mrna1;Target=FBgn0051522.1 814 1134 +
Chr2	stalkie_big_nohaplotig	CDS	120389845	120389926	.	+	0	Parent=FBgn0051522.1.mrna1;Target=FBgn0051522.1 1 82 +
Chr2	stalkie_big_nohaplotig	CDS	120393666	120393748	.	+	2	Parent=FBgn0051522.1.mrna1;Target=FBgn0051522.1 83 165 +
Chr2	stalkie_big_nohaplotig	CDS	120398391	120398498	.	+	0	Parent=FBgn0051522.1.mrna1;Target=FBgn0051522.1 166 273 +
Chr2	stalkie_big_nohaplotig	CDS	120400906	120400989	.	+	0	Parent=FBgn0051522.1.mrna1;Target=FBgn0051522.1 274 357 +
Chr2	stalkie_big_nohaplotig	CDS	120402320	120402376	.	+	0	Parent=FBgn0051522.1.mrna1;Target=FBgn0051522.1 358 414 +
Chr2	stalkie_big_nohaplotig	CDS	120404317	120404422	.	+	0	Parent=FBgn0051522.1.mrna1;Target=FBgn0051522.1 415 520 +
Chr2	stalkie_big_nohaplotig	CDS	120404502	120404638	.	+	2	Parent=FBgn0051522.1.mrna1;Target=FBgn0051522.1 521 657 +
Chr2	stalkie_big_nohaplotig	CDS	120404708	120404863	.	+	0	Parent=FBgn0051522.1.mrna1;Target=FBgn0051522.1 658 813 +
Chr2	stalkie_big_nohaplotig	CDS	120409106	120409426	.	+	0	Parent=FBgn0051522.1.mrna1;Target=FBgn0051522.1 814 1134 +
Chr2	stalkie_big_nohaplotig	mRNA	120400966	120401403	.	+	.	ID=comp110171_c1_seq1.mrna1;geneID=comp110171_c1_seq1.path1;Name=comp110171_c1_seq1;Dir=indeterminatecoverage=99.8;identity=96.3;matches=422;mismatches=4;indels=12;unknowns=0;Target=comp110171_c1_seq1 426 1 .;CDS_Target=comp110171_c1_seq1 90 1 .;locus=RLOC_00021072
Chr2	stalkie_big_nohaplotig	exon	120400966	120401403	96	+	.	Parent=comp110171_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	120400966	120401055	.	+	0	Parent=comp110171_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120404841	120406204	.	+	.	ID=comp156468_c0_seq1.mrna1;geneID=comp156468_c0_seq1.path1;Name=comp156468_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=1344;mismatches=20;indels=3;unknowns=0;Target=comp156468_c0_seq1 1367 1 .;CDS_Target=comp156468_c0_seq1 135 1 .;locus=RLOC_00021072
Chr2	stalkie_big_nohaplotig	exon	120404841	120406204	98	+	.	Parent=comp156468_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	120404841	120404975	.	+	0	Parent=comp156468_c0_seq1.mrna1
Chr2	gffcl	locus	120399894	120400686	.	+	.	ID=RLOC_00021073;geneIDs=comp154934_c0_seq1.path1;transcripts=comp154934_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120399894	120400686	.	+	.	ID=comp154934_c0_seq1.mrna1;geneID=comp154934_c0_seq1.path1;Name=comp154934_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.5;matches=771;mismatches=22;indels=14;unknowns=0;Target=comp154934_c0_seq1 807 1 .;CDS_Target=comp154934_c0_seq1 402 328 .;locus=RLOC_00021073
Chr2	stalkie_big_nohaplotig	exon	120399894	120400686	95	+	.	Parent=comp154934_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	120400218	120400292	.	+	0	Parent=comp154934_c0_seq1.mrna1
Chr2	gffcl	locus	120407969	120408773	.	+	.	ID=RLOC_00021074;geneIDs=comp154693_c1_seq1.path1;transcripts=comp154693_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120407969	120408773	.	+	.	ID=comp154693_c1_seq1.mrna1;geneID=comp154693_c1_seq1.path1;Name=comp154693_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=796;mismatches=8;indels=1;unknowns=0;Target=comp154693_c1_seq1 804 1 .;CDS_Target=comp154693_c1_seq1 474 355 .;locus=RLOC_00021074
Chr2	stalkie_big_nohaplotig	exon	120407969	120408773	98	+	.	Parent=comp154693_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	120408323	120408442	.	+	0	Parent=comp154693_c1_seq1.mrna1
Chr2	gffcl	locus	120414160	120418780	.	-	.	ID=RLOC_00021075;geneIDs=FBgn0037814.1.path1;transcripts=FBgn0037814.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120414160	120418780	.	-	.	ID=FBgn0037814.1.mrna1;geneID=FBgn0037814.1.path1;Name=FBgn0037814.1;Dir=sensecoverage=100.0;identity=99.7;matches=2770;mismatches=8;indels=0;unknowns=0;locus=RLOC_00021075
Chr2	stalkie_big_nohaplotig	exon	120414160	120414594	99	-	.	Parent=FBgn0037814.1.mrna1;Target=FBgn0037814.1 2344 2778 +
Chr2	stalkie_big_nohaplotig	exon	120414654	120414892	100	-	.	Parent=FBgn0037814.1.mrna1;Target=FBgn0037814.1 2105 2343 +
Chr2	stalkie_big_nohaplotig	exon	120414945	120415695	99	-	.	Parent=FBgn0037814.1.mrna1;Target=FBgn0037814.1 1354 2104 +
Chr2	stalkie_big_nohaplotig	exon	120415757	120416433	99	-	.	Parent=FBgn0037814.1.mrna1;Target=FBgn0037814.1 677 1353 +
Chr2	stalkie_big_nohaplotig	exon	120416500	120416747	100	-	.	Parent=FBgn0037814.1.mrna1;Target=FBgn0037814.1 429 676 +
Chr2	stalkie_big_nohaplotig	exon	120418041	120418151	100	-	.	Parent=FBgn0037814.1.mrna1;Target=FBgn0037814.1 318 428 +
Chr2	stalkie_big_nohaplotig	exon	120418205	120418302	100	-	.	Parent=FBgn0037814.1.mrna1;Target=FBgn0037814.1 220 317 +
Chr2	stalkie_big_nohaplotig	exon	120418421	120418620	100	-	.	Parent=FBgn0037814.1.mrna1;Target=FBgn0037814.1 20 219 +
Chr2	stalkie_big_nohaplotig	exon	120418762	120418780	100	-	.	Parent=FBgn0037814.1.mrna1;Target=FBgn0037814.1 1 19 +
Chr2	stalkie_big_nohaplotig	CDS	120414160	120414594	.	-	0	Parent=FBgn0037814.1.mrna1;Target=FBgn0037814.1 2344 2778 +
Chr2	stalkie_big_nohaplotig	CDS	120414654	120414892	.	-	2	Parent=FBgn0037814.1.mrna1;Target=FBgn0037814.1 2105 2343 +
Chr2	stalkie_big_nohaplotig	CDS	120414945	120415695	.	-	0	Parent=FBgn0037814.1.mrna1;Target=FBgn0037814.1 1354 2104 +
Chr2	stalkie_big_nohaplotig	CDS	120415757	120416433	.	-	2	Parent=FBgn0037814.1.mrna1;Target=FBgn0037814.1 677 1353 +
Chr2	stalkie_big_nohaplotig	CDS	120416500	120416747	.	-	1	Parent=FBgn0037814.1.mrna1;Target=FBgn0037814.1 429 676 +
Chr2	stalkie_big_nohaplotig	CDS	120418041	120418151	.	-	1	Parent=FBgn0037814.1.mrna1;Target=FBgn0037814.1 318 428 +
Chr2	stalkie_big_nohaplotig	CDS	120418205	120418302	.	-	0	Parent=FBgn0037814.1.mrna1;Target=FBgn0037814.1 220 317 +
Chr2	stalkie_big_nohaplotig	CDS	120418421	120418620	.	-	2	Parent=FBgn0037814.1.mrna1;Target=FBgn0037814.1 20 219 +
Chr2	stalkie_big_nohaplotig	CDS	120418762	120418780	.	-	0	Parent=FBgn0037814.1.mrna1;Target=FBgn0037814.1 1 19 +
Chr2	gffcl	locus	120420751	120439008	.	-	.	ID=RLOC_00021076;geneIDs=FBgn0259233.1.path1;transcripts=FBgn0259233.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120420751	120439008	.	-	.	ID=FBgn0259233.1.mrna1;geneID=FBgn0259233.1.path1;Name=FBgn0259233.1;Dir=sensecoverage=99.9;identity=99.9;matches=5992;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021076
Chr2	stalkie_big_nohaplotig	exon	120420751	120421141	100	-	.	Parent=FBgn0259233.1.mrna1;Target=FBgn0259233.1 5610 6000 +
Chr2	stalkie_big_nohaplotig	exon	120421203	120425145	99	-	.	Parent=FBgn0259233.1.mrna1;Target=FBgn0259233.1 1667 5609 +
Chr2	stalkie_big_nohaplotig	exon	120425209	120425358	100	-	.	Parent=FBgn0259233.1.mrna1;Target=FBgn0259233.1 1517 1666 +
Chr2	stalkie_big_nohaplotig	exon	120425417	120426144	100	-	.	Parent=FBgn0259233.1.mrna1;Target=FBgn0259233.1 789 1516 +
Chr2	stalkie_big_nohaplotig	exon	120426213	120426602	100	-	.	Parent=FBgn0259233.1.mrna1;Target=FBgn0259233.1 399 788 +
Chr2	stalkie_big_nohaplotig	exon	120438537	120438663	100	-	.	Parent=FBgn0259233.1.mrna1;Target=FBgn0259233.1 272 398 +
Chr2	stalkie_big_nohaplotig	exon	120438742	120439008	98	-	.	Parent=FBgn0259233.1.mrna1;Target=FBgn0259233.1 5 271 +
Chr2	stalkie_big_nohaplotig	CDS	120420751	120421141	.	-	1	Parent=FBgn0259233.1.mrna1;Target=FBgn0259233.1 5610 6000 +
Chr2	stalkie_big_nohaplotig	CDS	120421203	120425145	.	-	2	Parent=FBgn0259233.1.mrna1;Target=FBgn0259233.1 1667 5609 +
Chr2	stalkie_big_nohaplotig	CDS	120425209	120425358	.	-	2	Parent=FBgn0259233.1.mrna1;Target=FBgn0259233.1 1517 1666 +
Chr2	stalkie_big_nohaplotig	CDS	120425417	120426144	.	-	1	Parent=FBgn0259233.1.mrna1;Target=FBgn0259233.1 789 1516 +
Chr2	stalkie_big_nohaplotig	CDS	120426213	120426602	.	-	1	Parent=FBgn0259233.1.mrna1;Target=FBgn0259233.1 399 788 +
Chr2	stalkie_big_nohaplotig	CDS	120438537	120438663	.	-	2	Parent=FBgn0259233.1.mrna1;Target=FBgn0259233.1 272 398 +
Chr2	stalkie_big_nohaplotig	CDS	120438742	120439006	.	-	0	Parent=FBgn0259233.1.mrna1;Target=FBgn0259233.1 7 271 +
Chr2	gffcl	locus	120458663	120514647	.	+	.	ID=RLOC_00021077;geneIDs=comp149646_c0_seq1.path1;transcripts=comp149646_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120458663	120514647	.	+	.	ID=comp149646_c0_seq1.mrna1;geneID=comp149646_c0_seq1.path1;Name=comp149646_c0_seq1;Dir=indeterminatecoverage=59.7;identity=100.0;matches=766;mismatches=0;indels=0;unknowns=0;Target=comp149646_c0_seq1 444 325 .;locus=RLOC_00021077
Chr2	stalkie_big_nohaplotig	exon	120458663	120459399	100	+	.	Parent=comp149646_c0_seq1.mrna1;Target=comp149646_c0_seq1 737 1 .
Chr2	stalkie_big_nohaplotig	exon	120486133	120486140	100	+	.	Parent=comp149646_c0_seq1.mrna1;Target=comp149646_c0_seq1 745 738 .
Chr2	stalkie_big_nohaplotig	exon	120509020	120509028	100	+	.	Parent=comp149646_c0_seq1.mrna1;Target=comp149646_c0_seq1 754 746 .
Chr2	stalkie_big_nohaplotig	exon	120512070	120512073	100	+	.	Parent=comp149646_c0_seq1.mrna1;Target=comp149646_c0_seq1 758 755 .
Chr2	stalkie_big_nohaplotig	exon	120514640	120514647	100	+	.	Parent=comp149646_c0_seq1.mrna1;Target=comp149646_c0_seq1 766 759 .
Chr2	stalkie_big_nohaplotig	CDS	120458987	120459106	.	+	0	Parent=comp149646_c0_seq1.mrna1
Chr2	gffcl	locus	120459603	120460415	.	-	.	ID=RLOC_00021078;geneIDs=comp150882_c0_seq1.path1;transcripts=comp150882_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120459603	120460415	.	-	.	ID=comp150882_c0_seq1.mrna1;geneID=comp150882_c0_seq1.path1;Name=comp150882_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=811;mismatches=2;indels=0;unknowns=0;Target=comp150882_c0_seq1 813 1 .;CDS_Target=comp150882_c0_seq1 148 2 .;locus=RLOC_00021078
Chr2	stalkie_big_nohaplotig	exon	120459603	120460415	99	-	.	Parent=comp150882_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	120460268	120460414	.	-	0	Parent=comp150882_c0_seq1.mrna1
Chr2	gffcl	locus	120461057	120461401	.	-	.	ID=RLOC_00021079;geneIDs=FBgn0040600.1.path1;transcripts=FBgn0040600.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120461057	120461401	.	-	.	ID=FBgn0040600.1.mrna1;geneID=FBgn0040600.1.path1;Name=FBgn0040600.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=345;mismatches=0;indels=0;unknowns=0;Target=FBgn0040600.1 345 1 .;locus=RLOC_00021079
Chr2	stalkie_big_nohaplotig	exon	120461057	120461401	100	-	.	Parent=FBgn0040600.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	120461057	120461401	.	-	0	Parent=FBgn0040600.1.mrna1
Chr2	gffcl	locus	120510420	120510983	.	+	.	ID=RLOC_00021080;geneIDs=FBgn0015591.1.path1;transcripts=FBgn0015591.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120510420	120510983	.	+	.	ID=FBgn0015591.1.mrna1;geneID=FBgn0015591.1.path1;Name=FBgn0015591.1;Dir=sensecoverage=100.0;identity=99.2;matches=497;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021080
Chr2	stalkie_big_nohaplotig	exon	120510420	120510828	99	+	.	Parent=FBgn0015591.1.mrna1;Target=FBgn0015591.1 1 409 +
Chr2	stalkie_big_nohaplotig	exon	120510892	120510983	100	+	.	Parent=FBgn0015591.1.mrna1;Target=FBgn0015591.1 410 501 +
Chr2	stalkie_big_nohaplotig	CDS	120510420	120510828	.	+	0	Parent=FBgn0015591.1.mrna1;Target=FBgn0015591.1 1 409 +
Chr2	stalkie_big_nohaplotig	CDS	120510892	120510983	.	+	2	Parent=FBgn0015591.1.mrna1;Target=FBgn0015591.1 410 501 +
Chr2	gffcl	locus	120514756	120522727	.	-	.	ID=RLOC_00021081;geneIDs=FBgn0000140.1.path1;transcripts=FBgn0000140.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120514756	120522727	.	-	.	ID=FBgn0000140.1.mrna1;geneID=FBgn0000140.1.path1;Name=FBgn0000140.1;Dir=sensecoverage=100.0;identity=100.0;matches=6126;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021081
Chr2	stalkie_big_nohaplotig	exon	120514756	120515016	100	-	.	Parent=FBgn0000140.1.mrna1;Target=FBgn0000140.1 5866 6126 +
Chr2	stalkie_big_nohaplotig	exon	120515082	120515383	100	-	.	Parent=FBgn0000140.1.mrna1;Target=FBgn0000140.1 5564 5865 +
Chr2	stalkie_big_nohaplotig	exon	120515445	120518413	100	-	.	Parent=FBgn0000140.1.mrna1;Target=FBgn0000140.1 2595 5563 +
Chr2	stalkie_big_nohaplotig	exon	120519222	120519999	100	-	.	Parent=FBgn0000140.1.mrna1;Target=FBgn0000140.1 1817 2594 +
Chr2	stalkie_big_nohaplotig	exon	120520073	120521483	100	-	.	Parent=FBgn0000140.1.mrna1;Target=FBgn0000140.1 406 1816 +
Chr2	stalkie_big_nohaplotig	exon	120521554	120521760	100	-	.	Parent=FBgn0000140.1.mrna1;Target=FBgn0000140.1 199 405 +
Chr2	stalkie_big_nohaplotig	exon	120522478	120522654	100	-	.	Parent=FBgn0000140.1.mrna1;Target=FBgn0000140.1 22 198 +
Chr2	stalkie_big_nohaplotig	exon	120522707	120522727	100	-	.	Parent=FBgn0000140.1.mrna1;Target=FBgn0000140.1 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	120514756	120515016	.	-	0	Parent=FBgn0000140.1.mrna1;Target=FBgn0000140.1 5866 6126 +
Chr2	stalkie_big_nohaplotig	CDS	120515082	120515383	.	-	2	Parent=FBgn0000140.1.mrna1;Target=FBgn0000140.1 5564 5865 +
Chr2	stalkie_big_nohaplotig	CDS	120515445	120518413	.	-	1	Parent=FBgn0000140.1.mrna1;Target=FBgn0000140.1 2595 5563 +
Chr2	stalkie_big_nohaplotig	CDS	120519222	120519999	.	-	2	Parent=FBgn0000140.1.mrna1;Target=FBgn0000140.1 1817 2594 +
Chr2	stalkie_big_nohaplotig	CDS	120520073	120521483	.	-	0	Parent=FBgn0000140.1.mrna1;Target=FBgn0000140.1 406 1816 +
Chr2	stalkie_big_nohaplotig	CDS	120521554	120521760	.	-	0	Parent=FBgn0000140.1.mrna1;Target=FBgn0000140.1 199 405 +
Chr2	stalkie_big_nohaplotig	CDS	120522478	120522654	.	-	0	Parent=FBgn0000140.1.mrna1;Target=FBgn0000140.1 22 198 +
Chr2	stalkie_big_nohaplotig	CDS	120522707	120522727	.	-	0	Parent=FBgn0000140.1.mrna1;Target=FBgn0000140.1 1 21 +
Chr2	gffcl	locus	120524405	120534466	.	-	.	ID=RLOC_00021082;geneIDs=FBgn0003719.1.path1;transcripts=FBgn0003719.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120524405	120534466	.	-	.	ID=FBgn0003719.1.mrna1;geneID=FBgn0003719.1.path1;Name=FBgn0003719.1;Dir=sensecoverage=100.0;identity=99.5;matches=2966;mismatches=10;indels=6;unknowns=0;locus=RLOC_00021082
Chr2	stalkie_big_nohaplotig	exon	120524405	120524659	99	-	.	Parent=FBgn0003719.1.mrna1;Target=FBgn0003719.1 2728 2982 +
Chr2	stalkie_big_nohaplotig	exon	120524733	120524986	100	-	.	Parent=FBgn0003719.1.mrna1;Target=FBgn0003719.1 2474 2727 +
Chr2	stalkie_big_nohaplotig	exon	120525054	120525234	100	-	.	Parent=FBgn0003719.1.mrna1;Target=FBgn0003719.1 2293 2473 +
Chr2	stalkie_big_nohaplotig	exon	120525481	120525767	98	-	.	Parent=FBgn0003719.1.mrna1;Target=FBgn0003719.1 2006 2292 +
Chr2	stalkie_big_nohaplotig	exon	120525881	120526243	99	-	.	Parent=FBgn0003719.1.mrna1;Target=FBgn0003719.1 1643 2005 +
Chr2	stalkie_big_nohaplotig	exon	120526358	120526563	100	-	.	Parent=FBgn0003719.1.mrna1;Target=FBgn0003719.1 1437 1642 +
Chr2	stalkie_big_nohaplotig	exon	120526690	120526954	100	-	.	Parent=FBgn0003719.1.mrna1;Target=FBgn0003719.1 1172 1436 +
Chr2	stalkie_big_nohaplotig	exon	120528677	120528875	100	-	.	Parent=FBgn0003719.1.mrna1;Target=FBgn0003719.1 973 1171 +
Chr2	stalkie_big_nohaplotig	exon	120529899	120530547	99	-	.	Parent=FBgn0003719.1.mrna1;Target=FBgn0003719.1 324 972 +
Chr2	stalkie_big_nohaplotig	exon	120530622	120530858	97	-	.	Parent=FBgn0003719.1.mrna1;Target=FBgn0003719.1 81 323 +
Chr2	stalkie_big_nohaplotig	exon	120534387	120534466	100	-	.	Parent=FBgn0003719.1.mrna1;Target=FBgn0003719.1 1 80 +
Chr2	stalkie_big_nohaplotig	CDS	120524405	120524659	.	-	0	Parent=FBgn0003719.1.mrna1;Target=FBgn0003719.1 2728 2982 +
Chr2	stalkie_big_nohaplotig	CDS	120524733	120524986	.	-	2	Parent=FBgn0003719.1.mrna1;Target=FBgn0003719.1 2474 2727 +
Chr2	stalkie_big_nohaplotig	CDS	120525054	120525234	.	-	0	Parent=FBgn0003719.1.mrna1;Target=FBgn0003719.1 2293 2473 +
Chr2	stalkie_big_nohaplotig	CDS	120525481	120525767	.	-	2	Parent=FBgn0003719.1.mrna1;Target=FBgn0003719.1 2006 2292 +
Chr2	stalkie_big_nohaplotig	CDS	120525881	120526243	.	-	2	Parent=FBgn0003719.1.mrna1;Target=FBgn0003719.1 1643 2005 +
Chr2	stalkie_big_nohaplotig	CDS	120526358	120526563	.	-	1	Parent=FBgn0003719.1.mrna1;Target=FBgn0003719.1 1437 1642 +
Chr2	stalkie_big_nohaplotig	CDS	120526690	120526954	.	-	2	Parent=FBgn0003719.1.mrna1;Target=FBgn0003719.1 1172 1436 +
Chr2	stalkie_big_nohaplotig	CDS	120528677	120528875	.	-	0	Parent=FBgn0003719.1.mrna1;Target=FBgn0003719.1 973 1171 +
Chr2	stalkie_big_nohaplotig	CDS	120529899	120530547	.	-	1	Parent=FBgn0003719.1.mrna1;Target=FBgn0003719.1 324 972 +
Chr2	stalkie_big_nohaplotig	CDS	120530622	120530858	.	-	1	Parent=FBgn0003719.1.mrna1;Target=FBgn0003719.1 81 323 +
Chr2	stalkie_big_nohaplotig	CDS	120534387	120534466	.	-	0	Parent=FBgn0003719.1.mrna1;Target=FBgn0003719.1 1 80 +
Chr2	gffcl	locus	120548953	120549229	.	-	.	ID=RLOC_00021083;geneIDs=comp146018_c0_seq1.path1;transcripts=comp146018_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120548953	120549229	.	-	.	ID=comp146018_c0_seq1.mrna1;geneID=comp146018_c0_seq1.path1;Name=comp146018_c0_seq1;Dir=indeterminatecoverage=99.3;identity=100.0;matches=277;mismatches=0;indels=0;unknowns=0;Target=comp146018_c0_seq1 277 1 .;CDS_Target=comp146018_c0_seq1 68 3 .;locus=RLOC_00021083
Chr2	stalkie_big_nohaplotig	exon	120548953	120549229	100	-	.	Parent=comp146018_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	120549162	120549227	.	-	0	Parent=comp146018_c0_seq1.mrna1
Chr2	gffcl	locus	120549673	120612151	.	-	.	ID=RLOC_00021084;geneIDs=FBgn0004885.1.path1,comp98359_c0_seq1.path1;transcripts=FBgn0004885.1.mrna1,comp98359_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120549673	120612151	.	-	.	ID=FBgn0004885.1.mrna1;geneID=FBgn0004885.1.path1;Name=FBgn0004885.1;Dir=sensecoverage=100.0;identity=100.0;matches=4792;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021084
Chr2	stalkie_big_nohaplotig	exon	120549673	120549945	100	-	.	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 4522 4794 +
Chr2	stalkie_big_nohaplotig	exon	120550016	120550269	100	-	.	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 4268 4521 +
Chr2	stalkie_big_nohaplotig	exon	120550344	120550524	100	-	.	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 4087 4267 +
Chr2	stalkie_big_nohaplotig	exon	120550624	120551267	100	-	.	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 3443 4086 +
Chr2	stalkie_big_nohaplotig	exon	120551377	120551582	100	-	.	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 3237 3442 +
Chr2	stalkie_big_nohaplotig	exon	120552454	120552718	100	-	.	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 2972 3236 +
Chr2	stalkie_big_nohaplotig	exon	120553833	120554031	100	-	.	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 2773 2971 +
Chr2	stalkie_big_nohaplotig	exon	120554220	120554778	100	-	.	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 2214 2772 +
Chr2	stalkie_big_nohaplotig	exon	120554997	120555233	100	-	.	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 1977 2213 +
Chr2	stalkie_big_nohaplotig	exon	120559777	120560136	100	-	.	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 1617 1976 +
Chr2	stalkie_big_nohaplotig	exon	120560292	120560950	100	-	.	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 958 1616 +
Chr2	stalkie_big_nohaplotig	exon	120563427	120563698	100	-	.	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 686 957 +
Chr2	stalkie_big_nohaplotig	exon	120611467	120612151	99	-	.	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 1 685 +
Chr2	stalkie_big_nohaplotig	CDS	120549673	120549945	.	-	0	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 4522 4794 +
Chr2	stalkie_big_nohaplotig	CDS	120550016	120550269	.	-	2	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 4268 4521 +
Chr2	stalkie_big_nohaplotig	CDS	120550344	120550524	.	-	0	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 4087 4267 +
Chr2	stalkie_big_nohaplotig	CDS	120550624	120551267	.	-	2	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 3443 4086 +
Chr2	stalkie_big_nohaplotig	CDS	120551377	120551582	.	-	1	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 3237 3442 +
Chr2	stalkie_big_nohaplotig	CDS	120552454	120552718	.	-	2	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 2972 3236 +
Chr2	stalkie_big_nohaplotig	CDS	120553833	120554031	.	-	0	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 2773 2971 +
Chr2	stalkie_big_nohaplotig	CDS	120554220	120554778	.	-	1	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 2214 2772 +
Chr2	stalkie_big_nohaplotig	CDS	120554997	120555233	.	-	1	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 1977 2213 +
Chr2	stalkie_big_nohaplotig	CDS	120559777	120560136	.	-	1	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 1617 1976 +
Chr2	stalkie_big_nohaplotig	CDS	120560292	120560950	.	-	0	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 958 1616 +
Chr2	stalkie_big_nohaplotig	CDS	120563427	120563698	.	-	2	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 686 957 +
Chr2	stalkie_big_nohaplotig	CDS	120611467	120612151	.	-	0	Parent=FBgn0004885.1.mrna1;Target=FBgn0004885.1 1 685 +
Chr2	stalkie_big_nohaplotig	mRNA	120555165	120555402	.	-	.	ID=comp98359_c0_seq1.mrna1;geneID=comp98359_c0_seq1.path1;Name=comp98359_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=236;mismatches=2;indels=0;unknowns=0;Target=comp98359_c0_seq1 238 1 .;CDS_Target=comp98359_c0_seq1 79 2 .;locus=RLOC_00021084
Chr2	stalkie_big_nohaplotig	exon	120555165	120555402	99	-	.	Parent=comp98359_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	120555324	120555401	.	-	0	Parent=comp98359_c0_seq1.mrna1
Chr2	gffcl	locus	120639051	120641832	.	+	.	ID=RLOC_00021085;geneIDs=FBgn0051119.1.path1,comp153646_c0_seq1.path1;transcripts=comp153646_c0_seq1.mrna1,FBgn0051119.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120639051	120641832	.	+	.	ID=comp153646_c0_seq1.mrna1;geneID=comp153646_c0_seq1.path1;Name=comp153646_c0_seq1;Dir=sensecoverage=93.2;identity=99.9;matches=2659;mismatches=2;indels=1;unknowns=0;locus=RLOC_00021085
Chr2	stalkie_big_nohaplotig	exon	120639051	120639276	100	+	.	Parent=comp153646_c0_seq1.mrna1;Target=comp153646_c0_seq1 194 419 +
Chr2	stalkie_big_nohaplotig	exon	120639340	120639973	100	+	.	Parent=comp153646_c0_seq1.mrna1;Target=comp153646_c0_seq1 420 1053 +
Chr2	stalkie_big_nohaplotig	exon	120640032	120641832	99	+	.	Parent=comp153646_c0_seq1.mrna1;Target=comp153646_c0_seq1 1054 2855 +
Chr2	stalkie_big_nohaplotig	CDS	120639594	120639973	.	+	0	Parent=comp153646_c0_seq1.mrna1;Target=comp153646_c0_seq1 674 1053 +
Chr2	stalkie_big_nohaplotig	CDS	120640032	120640296	.	+	1	Parent=comp153646_c0_seq1.mrna1;Target=comp153646_c0_seq1 1054 1318 +
Chr2	stalkie_big_nohaplotig	mRNA	120639067	120640293	.	+	.	ID=FBgn0051119.1.mrna1;geneID=FBgn0051119.1.path1;Name=FBgn0051119.1;Dir=sensecoverage=100.0;identity=100.0;matches=1050;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021085
Chr2	stalkie_big_nohaplotig	exon	120639067	120639276	100	+	.	Parent=FBgn0051119.1.mrna1;Target=FBgn0051119.1 1 210 +
Chr2	stalkie_big_nohaplotig	exon	120639340	120639450	100	+	.	Parent=FBgn0051119.1.mrna1;Target=FBgn0051119.1 211 321 +
Chr2	stalkie_big_nohaplotig	exon	120639507	120639973	100	+	.	Parent=FBgn0051119.1.mrna1;Target=FBgn0051119.1 322 788 +
Chr2	stalkie_big_nohaplotig	exon	120640032	120640293	100	+	.	Parent=FBgn0051119.1.mrna1;Target=FBgn0051119.1 789 1050 +
Chr2	stalkie_big_nohaplotig	CDS	120639067	120639276	.	+	0	Parent=FBgn0051119.1.mrna1;Target=FBgn0051119.1 1 210 +
Chr2	stalkie_big_nohaplotig	CDS	120639340	120639450	.	+	0	Parent=FBgn0051119.1.mrna1;Target=FBgn0051119.1 211 321 +
Chr2	stalkie_big_nohaplotig	CDS	120639507	120639973	.	+	0	Parent=FBgn0051119.1.mrna1;Target=FBgn0051119.1 322 788 +
Chr2	stalkie_big_nohaplotig	CDS	120640032	120640293	.	+	1	Parent=FBgn0051119.1.mrna1;Target=FBgn0051119.1 789 1050 +
Chr2	gffcl	locus	120642753	120645743	.	-	.	ID=RLOC_00021086;geneIDs=FBgn0039234.1.path1;transcripts=FBgn0039234.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120642753	120645743	.	-	.	ID=FBgn0039234.1.mrna1;geneID=FBgn0039234.1.path1;Name=FBgn0039234.1;Dir=sensecoverage=100.0;identity=100.0;matches=2157;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021086
Chr2	stalkie_big_nohaplotig	exon	120642753	120642774	100	-	.	Parent=FBgn0039234.1.mrna1;Target=FBgn0039234.1 2136 2157 +
Chr2	stalkie_big_nohaplotig	exon	120643036	120643246	100	-	.	Parent=FBgn0039234.1.mrna1;Target=FBgn0039234.1 1925 2135 +
Chr2	stalkie_big_nohaplotig	exon	120643331	120643539	100	-	.	Parent=FBgn0039234.1.mrna1;Target=FBgn0039234.1 1716 1924 +
Chr2	stalkie_big_nohaplotig	exon	120643601	120644414	100	-	.	Parent=FBgn0039234.1.mrna1;Target=FBgn0039234.1 902 1715 +
Chr2	stalkie_big_nohaplotig	exon	120644474	120645181	100	-	.	Parent=FBgn0039234.1.mrna1;Target=FBgn0039234.1 194 901 +
Chr2	stalkie_big_nohaplotig	exon	120645267	120645362	100	-	.	Parent=FBgn0039234.1.mrna1;Target=FBgn0039234.1 98 193 +
Chr2	stalkie_big_nohaplotig	exon	120645647	120645743	100	-	.	Parent=FBgn0039234.1.mrna1;Target=FBgn0039234.1 1 97 +
Chr2	stalkie_big_nohaplotig	CDS	120642753	120642774	.	-	1	Parent=FBgn0039234.1.mrna1;Target=FBgn0039234.1 2136 2157 +
Chr2	stalkie_big_nohaplotig	CDS	120643036	120643246	.	-	2	Parent=FBgn0039234.1.mrna1;Target=FBgn0039234.1 1925 2135 +
Chr2	stalkie_big_nohaplotig	CDS	120643331	120643539	.	-	1	Parent=FBgn0039234.1.mrna1;Target=FBgn0039234.1 1716 1924 +
Chr2	stalkie_big_nohaplotig	CDS	120643601	120644414	.	-	2	Parent=FBgn0039234.1.mrna1;Target=FBgn0039234.1 902 1715 +
Chr2	stalkie_big_nohaplotig	CDS	120644474	120645181	.	-	2	Parent=FBgn0039234.1.mrna1;Target=FBgn0039234.1 194 901 +
Chr2	stalkie_big_nohaplotig	CDS	120645267	120645362	.	-	2	Parent=FBgn0039234.1.mrna1;Target=FBgn0039234.1 98 193 +
Chr2	stalkie_big_nohaplotig	CDS	120645647	120645743	.	-	0	Parent=FBgn0039234.1.mrna1;Target=FBgn0039234.1 1 97 +
Chr2	gffcl	locus	120647205	120647825	.	-	.	ID=RLOC_00021087;geneIDs=FBgn0039233.1.path1;transcripts=FBgn0039233.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120647205	120647825	.	-	.	ID=FBgn0039233.1.mrna1;geneID=FBgn0039233.1.path1;Name=FBgn0039233.1;Dir=sensecoverage=100.0;identity=100.0;matches=567;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021087
Chr2	stalkie_big_nohaplotig	exon	120647205	120647688	100	-	.	Parent=FBgn0039233.1.mrna1;Target=FBgn0039233.1 84 567 +
Chr2	stalkie_big_nohaplotig	exon	120647743	120647825	100	-	.	Parent=FBgn0039233.1.mrna1;Target=FBgn0039233.1 1 83 +
Chr2	stalkie_big_nohaplotig	CDS	120647205	120647688	.	-	1	Parent=FBgn0039233.1.mrna1;Target=FBgn0039233.1 84 567 +
Chr2	stalkie_big_nohaplotig	CDS	120647743	120647825	.	-	0	Parent=FBgn0039233.1.mrna1;Target=FBgn0039233.1 1 83 +
Chr2	gffcl	locus	120651180	120654775	.	-	.	ID=RLOC_00021088;geneIDs=FBgn0013953.1.path2,comp156089_c0_seq1.path1;transcripts=FBgn0013953.1.mrna2,comp156089_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120651180	120654775	.	-	.	ID=FBgn0013953.1.mrna2;geneID=FBgn0013953.1.path2;Name=FBgn0013953.1;Dir=sensecoverage=92.2;identity=100.0;matches=1826;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021088
Chr2	stalkie_big_nohaplotig	exon	120651180	120651682	100	-	.	Parent=FBgn0013953.1.mrna2;Target=FBgn0013953.1 1478 1980 +
Chr2	stalkie_big_nohaplotig	exon	120651767	120652069	100	-	.	Parent=FBgn0013953.1.mrna2;Target=FBgn0013953.1 1175 1477 +
Chr2	stalkie_big_nohaplotig	exon	120653607	120653964	100	-	.	Parent=FBgn0013953.1.mrna2;Target=FBgn0013953.1 817 1174 +
Chr2	stalkie_big_nohaplotig	exon	120654028	120654441	100	-	.	Parent=FBgn0013953.1.mrna2;Target=FBgn0013953.1 403 816 +
Chr2	stalkie_big_nohaplotig	exon	120654528	120654775	100	-	.	Parent=FBgn0013953.1.mrna2;Target=FBgn0013953.1 155 402 +
Chr2	stalkie_big_nohaplotig	CDS	120651180	120651682	.	-	1	Parent=FBgn0013953.1.mrna2;Target=FBgn0013953.1 1478 1980 +
Chr2	stalkie_big_nohaplotig	CDS	120651767	120652069	.	-	1	Parent=FBgn0013953.1.mrna2;Target=FBgn0013953.1 1175 1477 +
Chr2	stalkie_big_nohaplotig	CDS	120653607	120653964	.	-	2	Parent=FBgn0013953.1.mrna2;Target=FBgn0013953.1 817 1174 +
Chr2	stalkie_big_nohaplotig	CDS	120654028	120654441	.	-	2	Parent=FBgn0013953.1.mrna2;Target=FBgn0013953.1 403 816 +
Chr2	stalkie_big_nohaplotig	CDS	120654528	120654775	.	-	1	Parent=FBgn0013953.1.mrna2;Target=FBgn0013953.1 155 402 +
Chr2	stalkie_big_nohaplotig	mRNA	120652047	120653447	.	-	.	ID=comp156089_c0_seq1.mrna1;geneID=comp156089_c0_seq1.path1;Name=comp156089_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1398;mismatches=3;indels=1;unknowns=0;Target=comp156089_c0_seq1 1402 1 .;CDS_Target=comp156089_c0_seq1 255 31 .;locus=RLOC_00021088
Chr2	stalkie_big_nohaplotig	exon	120652047	120653447	99	-	.	Parent=comp156089_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	120653193	120653417	.	-	0	Parent=comp156089_c0_seq1.mrna1
Chr2	gffcl	locus	120670080	120670465	.	-	.	ID=RLOC_00021091;geneIDs=FBgn0053870.2.path6;transcripts=FBgn0053870.2.mrna6
Chr2	stalkie_big_nohaplotig	mRNA	120670080	120670465	.	-	.	ID=FBgn0053870.2.mrna6;geneID=FBgn0053870.2.path6;Name=FBgn0053870.2;Dir=indeterminatecoverage=99.7;identity=100.0;matches=386;mismatches=0;indels=0;unknowns=0;Target=FBgn0053870.2 387 2 .;CDS_Target=FBgn0053870.2 387 4 .;locus=RLOC_00021091
Chr2	stalkie_big_nohaplotig	exon	120670080	120670465	100	-	.	Parent=FBgn0053870.2.mrna6
Chr2	stalkie_big_nohaplotig	CDS	120670080	120670463	.	-	0	Parent=FBgn0053870.2.mrna6
Chr2	stalkie_big_nohaplotig	mRNA	121346675	121348547	.	+	.	ID=comp153437_c0_seq1.mrna1;geneID=comp153437_c0_seq1.path1;Name=comp153437_c0_seq1;Dir=antisensecoverage=98.3;identity=99.9;matches=1418;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021092
Chr2	stalkie_big_nohaplotig	exon	121346675	121346804	99	+	.	Parent=comp153437_c0_seq1.mrna1;Target=comp153437_c0_seq1 1304 1433 -
Chr2	stalkie_big_nohaplotig	exon	121346957	121347170	100	+	.	Parent=comp153437_c0_seq1.mrna1;Target=comp153437_c0_seq1 1090 1303 -
Chr2	stalkie_big_nohaplotig	exon	121347247	121348080	100	+	.	Parent=comp153437_c0_seq1.mrna1;Target=comp153437_c0_seq1 256 1089 -
Chr2	stalkie_big_nohaplotig	exon	121348307	121348547	100	+	.	Parent=comp153437_c0_seq1.mrna1;Target=comp153437_c0_seq1 15 255 -
Chr2	stalkie_big_nohaplotig	CDS	121346789	121346804	.	+	0	Parent=comp153437_c0_seq1.mrna1;Target=comp153437_c0_seq1 1304 1319 .
Chr2	stalkie_big_nohaplotig	CDS	121346957	121347170	.	+	2	Parent=comp153437_c0_seq1.mrna1;Target=comp153437_c0_seq1 1090 1303 .
Chr2	stalkie_big_nohaplotig	CDS	121347247	121347646	.	+	1	Parent=comp153437_c0_seq1.mrna1;Target=comp153437_c0_seq1 690 1089 .
Chr2	gffcl	locus	120692848	120693472	.	-	.	ID=RLOC_00021093;geneIDs=comp151377_c0_seq1.path1;transcripts=comp151377_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120692848	120693472	.	-	.	ID=comp151377_c0_seq1.mrna1;geneID=comp151377_c0_seq1.path1;Name=comp151377_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=621;mismatches=4;indels=0;unknowns=0;Target=comp151377_c0_seq1 625 1 .;CDS_Target=comp151377_c0_seq1 213 109 .;locus=RLOC_00021093
Chr2	stalkie_big_nohaplotig	exon	120692848	120693472	99	-	.	Parent=comp151377_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	120693260	120693364	.	-	0	Parent=comp151377_c0_seq1.mrna1
Chr2	gffcl	locus	120723320	120732401	.	+	.	ID=RLOC_00021094;geneIDs=FBgn0039464.1.path1;transcripts=FBgn0039464.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120723320	120732401	.	+	.	ID=FBgn0039464.1.mrna1;geneID=FBgn0039464.1.path1;Name=FBgn0039464.1;Dir=sensecoverage=100.0;identity=100.0;matches=1149;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021094
Chr2	stalkie_big_nohaplotig	exon	120723320	120723483	100	+	.	Parent=FBgn0039464.1.mrna1;Target=FBgn0039464.1 1 164 +
Chr2	stalkie_big_nohaplotig	exon	120729622	120729745	100	+	.	Parent=FBgn0039464.1.mrna1;Target=FBgn0039464.1 165 288 +
Chr2	stalkie_big_nohaplotig	exon	120731323	120731670	100	+	.	Parent=FBgn0039464.1.mrna1;Target=FBgn0039464.1 289 636 +
Chr2	stalkie_big_nohaplotig	exon	120731731	120731869	100	+	.	Parent=FBgn0039464.1.mrna1;Target=FBgn0039464.1 637 775 +
Chr2	stalkie_big_nohaplotig	exon	120731943	120732136	100	+	.	Parent=FBgn0039464.1.mrna1;Target=FBgn0039464.1 776 969 +
Chr2	stalkie_big_nohaplotig	exon	120732222	120732401	100	+	.	Parent=FBgn0039464.1.mrna1;Target=FBgn0039464.1 970 1149 +
Chr2	stalkie_big_nohaplotig	CDS	120723320	120723483	.	+	0	Parent=FBgn0039464.1.mrna1;Target=FBgn0039464.1 1 164 +
Chr2	stalkie_big_nohaplotig	CDS	120729622	120729745	.	+	1	Parent=FBgn0039464.1.mrna1;Target=FBgn0039464.1 165 288 +
Chr2	stalkie_big_nohaplotig	CDS	120731323	120731670	.	+	0	Parent=FBgn0039464.1.mrna1;Target=FBgn0039464.1 289 636 +
Chr2	stalkie_big_nohaplotig	CDS	120731731	120731869	.	+	0	Parent=FBgn0039464.1.mrna1;Target=FBgn0039464.1 637 775 +
Chr2	stalkie_big_nohaplotig	CDS	120731943	120732136	.	+	2	Parent=FBgn0039464.1.mrna1;Target=FBgn0039464.1 776 969 +
Chr2	stalkie_big_nohaplotig	CDS	120732222	120732401	.	+	0	Parent=FBgn0039464.1.mrna1;Target=FBgn0039464.1 970 1149 +
Chr2	gffcl	locus	120732836	120733127	.	-	.	ID=RLOC_00021095;geneIDs=comp148065_c0_seq1.path1;transcripts=comp148065_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120732836	120733127	.	-	.	ID=comp148065_c0_seq1.mrna1;geneID=comp148065_c0_seq1.path1;Name=comp148065_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=292;mismatches=0;indels=0;unknowns=0;Target=comp148065_c0_seq1 292 1 .;CDS_Target=comp148065_c0_seq1 94 2 .;locus=RLOC_00021095
Chr2	stalkie_big_nohaplotig	exon	120732836	120733127	100	-	.	Parent=comp148065_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	120733034	120733126	.	-	0	Parent=comp148065_c0_seq1.mrna1
Chr2	gffcl	locus	120733433	120733701	.	+	.	ID=RLOC_00021096;geneIDs=comp144077_c0_seq1.path1;transcripts=comp144077_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120733433	120733701	.	+	.	ID=comp144077_c0_seq1.mrna1;geneID=comp144077_c0_seq1.path1;Name=comp144077_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=269;mismatches=0;indels=0;unknowns=0;Target=comp144077_c0_seq1 269 1 .;CDS_Target=comp144077_c0_seq1 150 1 .;locus=RLOC_00021096
Chr2	stalkie_big_nohaplotig	exon	120733433	120733701	100	+	.	Parent=comp144077_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	120733433	120733582	.	+	0	Parent=comp144077_c0_seq1.mrna1
Chr2	gffcl	locus	120741846	120743864	.	+	.	ID=RLOC_00021097;geneIDs=FBgn0031489.1.path1;transcripts=FBgn0031489.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120741846	120743864	.	+	.	ID=FBgn0031489.1.mrna1;geneID=FBgn0031489.1.path1;Name=FBgn0031489.1;Dir=sensecoverage=99.6;identity=100.0;matches=887;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021097
Chr2	stalkie_big_nohaplotig	exon	120741846	120741967	100	+	.	Parent=FBgn0031489.1.mrna1;Target=FBgn0031489.1 5 126 +
Chr2	stalkie_big_nohaplotig	exon	120742844	120742975	100	+	.	Parent=FBgn0031489.1.mrna1;Target=FBgn0031489.1 127 258 +
Chr2	stalkie_big_nohaplotig	exon	120743028	120743237	100	+	.	Parent=FBgn0031489.1.mrna1;Target=FBgn0031489.1 259 468 +
Chr2	stalkie_big_nohaplotig	exon	120743325	120743463	100	+	.	Parent=FBgn0031489.1.mrna1;Target=FBgn0031489.1 469 607 +
Chr2	stalkie_big_nohaplotig	exon	120743521	120743714	100	+	.	Parent=FBgn0031489.1.mrna1;Target=FBgn0031489.1 608 801 +
Chr2	stalkie_big_nohaplotig	exon	120743775	120743864	100	+	.	Parent=FBgn0031489.1.mrna1;Target=FBgn0031489.1 802 891 +
Chr2	stalkie_big_nohaplotig	CDS	120741848	120741967	.	+	0	Parent=FBgn0031489.1.mrna1;Target=FBgn0031489.1 7 126 +
Chr2	stalkie_big_nohaplotig	CDS	120742844	120742975	.	+	0	Parent=FBgn0031489.1.mrna1;Target=FBgn0031489.1 127 258 +
Chr2	stalkie_big_nohaplotig	CDS	120743028	120743237	.	+	0	Parent=FBgn0031489.1.mrna1;Target=FBgn0031489.1 259 468 +
Chr2	stalkie_big_nohaplotig	CDS	120743325	120743463	.	+	0	Parent=FBgn0031489.1.mrna1;Target=FBgn0031489.1 469 607 +
Chr2	stalkie_big_nohaplotig	CDS	120743521	120743714	.	+	2	Parent=FBgn0031489.1.mrna1;Target=FBgn0031489.1 608 801 +
Chr2	stalkie_big_nohaplotig	CDS	120743775	120743864	.	+	0	Parent=FBgn0031489.1.mrna1;Target=FBgn0031489.1 802 891 +
Chr2	gffcl	locus	120751080	120759482	.	-	.	ID=RLOC_00021099;geneIDs=FBgn0039463.1.path1;transcripts=FBgn0039463.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120751080	120759482	.	-	.	ID=FBgn0039463.1.mrna1;geneID=FBgn0039463.1.path1;Name=FBgn0039463.1;Dir=sensecoverage=100.0;identity=99.9;matches=1471;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021099
Chr2	stalkie_big_nohaplotig	exon	120751080	120751580	99	-	.	Parent=FBgn0039463.1.mrna1;Target=FBgn0039463.1 973 1473 +
Chr2	stalkie_big_nohaplotig	exon	120757243	120757370	99	-	.	Parent=FBgn0039463.1.mrna1;Target=FBgn0039463.1 845 972 +
Chr2	stalkie_big_nohaplotig	exon	120757432	120757556	100	-	.	Parent=FBgn0039463.1.mrna1;Target=FBgn0039463.1 720 844 +
Chr2	stalkie_big_nohaplotig	exon	120758710	120759125	100	-	.	Parent=FBgn0039463.1.mrna1;Target=FBgn0039463.1 304 719 +
Chr2	stalkie_big_nohaplotig	exon	120759180	120759482	100	-	.	Parent=FBgn0039463.1.mrna1;Target=FBgn0039463.1 1 303 +
Chr2	stalkie_big_nohaplotig	CDS	120751080	120751580	.	-	0	Parent=FBgn0039463.1.mrna1;Target=FBgn0039463.1 973 1473 +
Chr2	stalkie_big_nohaplotig	CDS	120757243	120757370	.	-	2	Parent=FBgn0039463.1.mrna1;Target=FBgn0039463.1 845 972 +
Chr2	stalkie_big_nohaplotig	CDS	120757432	120757556	.	-	1	Parent=FBgn0039463.1.mrna1;Target=FBgn0039463.1 720 844 +
Chr2	stalkie_big_nohaplotig	CDS	120758710	120759125	.	-	0	Parent=FBgn0039463.1.mrna1;Target=FBgn0039463.1 304 719 +
Chr2	stalkie_big_nohaplotig	CDS	120759180	120759482	.	-	0	Parent=FBgn0039463.1.mrna1;Target=FBgn0039463.1 1 303 +
Chr2	gffcl	locus	120790054	120790440	.	+	.	ID=RLOC_00021101;geneIDs=FBgn0053817.2.path6;transcripts=FBgn0053817.2.mrna6
Chr2	stalkie_big_nohaplotig	mRNA	120790054	120790440	.	+	.	ID=FBgn0053817.2.mrna6;geneID=FBgn0053817.2.path6;Name=FBgn0053817.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=387;mismatches=0;indels=0;unknowns=0;Target=FBgn0053817.2 387 1 .;locus=RLOC_00021101
Chr2	stalkie_big_nohaplotig	exon	120790054	120790440	100	+	.	Parent=FBgn0053817.2.mrna6
Chr2	stalkie_big_nohaplotig	CDS	120790054	120790440	.	+	0	Parent=FBgn0053817.2.mrna6
Chr2	gffcl	locus	120800128	120800514	.	-	.	ID=RLOC_00021103;geneIDs=FBgn0053817.2.path7;transcripts=FBgn0053817.2.mrna7
Chr2	stalkie_big_nohaplotig	mRNA	120800128	120800514	.	-	.	ID=FBgn0053817.2.mrna7;geneID=FBgn0053817.2.path7;Name=FBgn0053817.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=387;mismatches=0;indels=0;unknowns=0;Target=FBgn0053817.2 387 1 .;locus=RLOC_00021103
Chr2	stalkie_big_nohaplotig	exon	120800128	120800514	100	-	.	Parent=FBgn0053817.2.mrna7
Chr2	stalkie_big_nohaplotig	CDS	120800128	120800514	.	-	0	Parent=FBgn0053817.2.mrna7
Chr2	gffcl	locus	120808700	120809086	.	-	.	ID=RLOC_00021106;geneIDs=FBgn0053817.2.path8;transcripts=FBgn0053817.2.mrna8
Chr2	stalkie_big_nohaplotig	mRNA	120808700	120809086	.	-	.	ID=FBgn0053817.2.mrna8;geneID=FBgn0053817.2.path8;Name=FBgn0053817.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=387;mismatches=0;indels=0;unknowns=0;Target=FBgn0053817.2 387 1 .;locus=RLOC_00021106
Chr2	stalkie_big_nohaplotig	exon	120808700	120809086	100	-	.	Parent=FBgn0053817.2.mrna8
Chr2	stalkie_big_nohaplotig	CDS	120808700	120809086	.	-	0	Parent=FBgn0053817.2.mrna8
Chr2	gffcl	locus	120813901	120814286	.	+	.	ID=RLOC_00021108;geneIDs=FBgn0053870.2.path7;transcripts=FBgn0053870.2.mrna7
Chr2	stalkie_big_nohaplotig	mRNA	120813901	120814286	.	+	.	ID=FBgn0053870.2.mrna7;geneID=FBgn0053870.2.path7;Name=FBgn0053870.2;Dir=indeterminatecoverage=99.7;identity=100.0;matches=386;mismatches=0;indels=0;unknowns=0;Target=FBgn0053870.2 387 2 .;CDS_Target=FBgn0053870.2 387 4 .;locus=RLOC_00021108
Chr2	stalkie_big_nohaplotig	exon	120813901	120814286	100	+	.	Parent=FBgn0053870.2.mrna7
Chr2	stalkie_big_nohaplotig	CDS	120813903	120814286	.	+	0	Parent=FBgn0053870.2.mrna7
Chr2	gffcl	locus	120824736	120825121	.	-	.	ID=RLOC_00021111;geneIDs=FBgn0053870.2.path8;transcripts=FBgn0053870.2.mrna8
Chr2	stalkie_big_nohaplotig	mRNA	120824736	120825121	.	-	.	ID=FBgn0053870.2.mrna8;geneID=FBgn0053870.2.path8;Name=FBgn0053870.2;Dir=indeterminatecoverage=99.7;identity=100.0;matches=386;mismatches=0;indels=0;unknowns=0;Target=FBgn0053870.2 387 2 .;CDS_Target=FBgn0053870.2 387 4 .;locus=RLOC_00021111
Chr2	stalkie_big_nohaplotig	exon	120824736	120825121	100	-	.	Parent=FBgn0053870.2.mrna8
Chr2	stalkie_big_nohaplotig	CDS	120824736	120825119	.	-	0	Parent=FBgn0053870.2.mrna8
Chr2	gffcl	locus	120845289	120846566	.	+	.	ID=RLOC_00021112;geneIDs=comp93865_c0_seq1.path1;transcripts=comp93865_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120845289	120846566	.	+	.	ID=comp93865_c0_seq1.mrna1;geneID=comp93865_c0_seq1.path1;Name=comp93865_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1273;mismatches=5;indels=1;unknowns=0;Target=comp93865_c0_seq1 1279 1 .;CDS_Target=comp93865_c0_seq1 68 3 .;locus=RLOC_00021112
Chr2	stalkie_big_nohaplotig	exon	120845289	120846566	99	+	.	Parent=comp93865_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	120845291	120845356	.	+	0	Parent=comp93865_c0_seq1.mrna1
Chr2	gffcl	locus	120851062	120854313	.	-	.	ID=RLOC_00021113;geneIDs=comp160056_c0_seq1.path1;transcripts=comp160056_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120851062	120854313	.	-	.	ID=comp160056_c0_seq1.mrna1;geneID=comp160056_c0_seq1.path1;Name=comp160056_c0_seq1;Dir=indeterminatecoverage=97.1;identity=100.0;matches=3251;mismatches=1;indels=0;unknowns=0;Target=comp160056_c0_seq1 3252 1 .;CDS_Target=comp160056_c0_seq1 1047 685 .;locus=RLOC_00021113
Chr2	stalkie_big_nohaplotig	exon	120851062	120854313	99	-	.	Parent=comp160056_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	120853267	120853629	.	-	0	Parent=comp160056_c0_seq1.mrna1
Chr2	gffcl	locus	120856313	120856410	.	-	.	ID=RLOC_00021114;geneIDs=comp160056_c0_seq1.path2;transcripts=comp160056_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	120856313	120856410	.	-	.	ID=comp160056_c0_seq1.mrna2;geneID=comp160056_c0_seq1.path2;Name=comp160056_c0_seq1;Dir=indeterminatecoverage=2.9;identity=99.0;matches=97;mismatches=1;indels=0;unknowns=0;Target=comp160056_c0_seq1 3350 3253 .;locus=RLOC_00021114
Chr2	stalkie_big_nohaplotig	exon	120856313	120856410	98	-	.	Parent=comp160056_c0_seq1.mrna2
Chr2	gffcl	locus	120899414	120900846	.	-	.	ID=RLOC_00021115;geneIDs=comp160619_c5_seq1.path1;transcripts=comp160619_c5_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120899414	120900846	.	-	.	ID=comp160619_c5_seq1.mrna1;geneID=comp160619_c5_seq1.path1;Name=comp160619_c5_seq1;Dir=indeterminatecoverage=54.0;identity=92.7;matches=1329;mismatches=104;indels=0;unknowns=0;Target=comp160619_c5_seq1 2107 675 .;CDS_Target=comp160619_c5_seq1 1664 1590 .;locus=RLOC_00021115
Chr2	stalkie_big_nohaplotig	exon	120899414	120900846	92	-	.	Parent=comp160619_c5_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	120899857	120899931	.	-	0	Parent=comp160619_c5_seq1.mrna1
Chr2	gffcl	locus	120958079	120960437	.	-	.	ID=RLOC_00021116;geneIDs=comp140243_c0_seq1.path1;transcripts=comp140243_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120958079	120960437	.	-	.	ID=comp140243_c0_seq1.mrna1;geneID=comp140243_c0_seq1.path1;Name=comp140243_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2359;mismatches=0;indels=0;unknowns=0;Target=comp140243_c0_seq1 2359 1 .;CDS_Target=comp140243_c0_seq1 2281 1967 .;locus=RLOC_00021116
Chr2	stalkie_big_nohaplotig	exon	120958079	120960437	100	-	.	Parent=comp140243_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	120958157	120958471	.	-	0	Parent=comp140243_c0_seq1.mrna1
Chr2	gffcl	locus	120972508	121146627	.	.	.	ID=RLOC_00021117;geneIDs=comp130780_c0_seq1.path1,comp130780_c0_seq1.path2,comp160456_c0_seq1.path1,comp162161_c5_seq1.path1;transcripts=comp160456_c0_seq1.mrna1,comp130780_c0_seq1.mrna2,comp162161_c5_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	120972508	121146627	.	-	.	ID=comp160456_c0_seq1.mrna1;geneID=comp160456_c0_seq1.path1;Name=comp160456_c0_seq1;Dir=antisensecoverage=82.1;identity=81.2;matches=823;mismatches=68;indels=123;unknowns=0;Target=comp160456_c0_seq1 149 166 .;locus=RLOC_00021117
Chr2	stalkie_big_nohaplotig	exon	120972508	120972809	92	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 1 309 -
Chr2	stalkie_big_nohaplotig	exon	120972839	120972897	91	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 432 489 -
Chr2	stalkie_big_nohaplotig	exon	120987936	120987972	86	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 707 743 -
Chr2	stalkie_big_nohaplotig	exon	120998083	120998088	100	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 744 749 -
Chr2	stalkie_big_nohaplotig	exon	121003522	121003529	100	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 750 757 -
Chr2	stalkie_big_nohaplotig	exon	121007405	121007415	72	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 758 765 -
Chr2	stalkie_big_nohaplotig	exon	121025057	121025062	100	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 766 771 -
Chr2	stalkie_big_nohaplotig	exon	121035929	121035936	100	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 792 799 -
Chr2	stalkie_big_nohaplotig	exon	121036864	121036918	54	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 806 854 -
Chr2	stalkie_big_nohaplotig	exon	121039615	121039618	100	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 855 858 -
Chr2	stalkie_big_nohaplotig	exon	121047151	121047157	100	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 859 865 -
Chr2	stalkie_big_nohaplotig	exon	121053690	121053693	100	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 866 869 -
Chr2	stalkie_big_nohaplotig	exon	121055141	121055149	100	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 870 878 -
Chr2	stalkie_big_nohaplotig	exon	121059351	121059355	100	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 879 883 -
Chr2	stalkie_big_nohaplotig	exon	121065288	121065332	53	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 884 942 -
Chr2	stalkie_big_nohaplotig	exon	121085417	121085425	100	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 943 951 -
Chr2	stalkie_big_nohaplotig	exon	121085450	121085458	100	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 1002 1010 -
Chr2	stalkie_big_nohaplotig	exon	121111194	121111199	100	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 1310 1315 -
Chr2	stalkie_big_nohaplotig	exon	121113320	121113328	17	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 1361 1405 -
Chr2	stalkie_big_nohaplotig	exon	121113710	121113714	80	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 1406 1410 -
Chr2	stalkie_big_nohaplotig	exon	121114065	121114072	100	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 1411 1418 -
Chr2	stalkie_big_nohaplotig	exon	121118637	121118647	100	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 1419 1429 -
Chr2	stalkie_big_nohaplotig	exon	121119621	121119628	100	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 1453 1460 -
Chr2	stalkie_big_nohaplotig	exon	121119648	121119660	100	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 1483 1495 -
Chr2	stalkie_big_nohaplotig	exon	121121518	121121522	12	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 1498 1538 -
Chr2	stalkie_big_nohaplotig	exon	121122273	121122283	90	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 1539 1549 -
Chr2	stalkie_big_nohaplotig	exon	121125801	121125810	100	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 1550 1559 -
Chr2	stalkie_big_nohaplotig	exon	121142743	121142766	43	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 1577 1613 -
Chr2	stalkie_big_nohaplotig	exon	121143270	121143284	86	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 1614 1628 -
Chr2	stalkie_big_nohaplotig	exon	121143519	121143521	100	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 1629 1631 -
Chr2	stalkie_big_nohaplotig	exon	121145151	121145156	100	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 1632 1637 -
Chr2	stalkie_big_nohaplotig	exon	121146443	121146627	98	-	.	Parent=comp160456_c0_seq1.mrna1;Target=comp160456_c0_seq1 1638 1821 -
Chr2	stalkie_big_nohaplotig	CDS	120972649	120972666	.	-	0	Parent=comp160456_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121024293	121028134	.	-	.	ID=comp130780_c0_seq1.mrna2;geneID=comp130780_c0_seq1.path2;Name=comp130780_c0_seq1;Dir=indeterminatecoverage=54.0;identity=99.6;matches=1448;mismatches=2;indels=4;unknowns=0;locus=RLOC_00021117
Chr2	stalkie_big_nohaplotig	exon	121024293	121025725	99	-	.	Parent=comp130780_c0_seq1.mrna2;Target=comp130780_c0_seq1 2703 1267 .
Chr2	stalkie_big_nohaplotig	exon	121027822	121027832	100	-	.	Parent=comp130780_c0_seq1.mrna2;Target=comp130780_c0_seq1 1261 1251 .
Chr2	stalkie_big_nohaplotig	exon	121028130	121028134	100	-	.	Parent=comp130780_c0_seq1.mrna2;Target=comp130780_c0_seq1 1250 1246 .
Chr2	stalkie_big_nohaplotig	CDS	121024294	121024431	.	-	0	Parent=comp130780_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	121084897	121088451	.	+	.	ID=comp162161_c5_seq1.mrna1;geneID=comp162161_c5_seq1.path1;Name=comp162161_c5_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=3551;mismatches=4;indels=0;unknowns=0;Target=comp162161_c5_seq1 3555 1 .;CDS_Target=comp162161_c5_seq1 2005 1688 .;locus=RLOC_00021117
Chr2	stalkie_big_nohaplotig	exon	121084897	121088451	99	+	.	Parent=comp162161_c5_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	121086584	121086901	.	+	0	Parent=comp162161_c5_seq1.mrna1
Chr2	gffcl	locus	121006313	121161208	.	-	.	ID=RLOC_00021118;geneIDs=comp163192_c0_seq1.path2;transcripts=comp163192_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	121006313	121161208	.	-	.	ID=comp163192_c0_seq1.mrna2;geneID=comp163192_c0_seq1.path2;Name=comp163192_c0_seq1;Dir=antisensecoverage=13.6;identity=97.2;matches=615;mismatches=12;indels=6;unknowns=0;locus=RLOC_00021118
Chr2	stalkie_big_nohaplotig	exon	121006313	121006348	97	-	.	Parent=comp163192_c0_seq1.mrna2;Target=comp163192_c0_seq1 3820 3856 -
Chr2	stalkie_big_nohaplotig	exon	121007216	121007356	97	-	.	Parent=comp163192_c0_seq1.mrna2;Target=comp163192_c0_seq1 3857 3997 -
Chr2	stalkie_big_nohaplotig	exon	121007416	121007507	98	-	.	Parent=comp163192_c0_seq1.mrna2;Target=comp163192_c0_seq1 3998 4089 -
Chr2	stalkie_big_nohaplotig	exon	121007578	121007725	96	-	.	Parent=comp163192_c0_seq1.mrna2;Target=comp163192_c0_seq1 4090 4237 -
Chr2	stalkie_big_nohaplotig	exon	121160999	121161208	96	-	.	Parent=comp163192_c0_seq1.mrna2;Target=comp163192_c0_seq1 4238 4452 -
Chr2	gffcl	locus	121028519	121053085	.	-	.	ID=RLOC_00021119;geneIDs=FBgn0015541.1.path1;transcripts=FBgn0015541.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121028519	121053085	.	-	.	ID=FBgn0015541.1.mrna1;geneID=FBgn0015541.1.path1;Name=FBgn0015541.1;Dir=sensecoverage=100.0;identity=99.9;matches=3370;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021119
Chr2	stalkie_big_nohaplotig	exon	121028519	121028771	100	-	.	Parent=FBgn0015541.1.mrna1;Target=FBgn0015541.1 3120 3372 +
Chr2	stalkie_big_nohaplotig	exon	121028837	121028980	100	-	.	Parent=FBgn0015541.1.mrna1;Target=FBgn0015541.1 2976 3119 +
Chr2	stalkie_big_nohaplotig	exon	121029047	121029214	100	-	.	Parent=FBgn0015541.1.mrna1;Target=FBgn0015541.1 2808 2975 +
Chr2	stalkie_big_nohaplotig	exon	121029820	121030010	100	-	.	Parent=FBgn0015541.1.mrna1;Target=FBgn0015541.1 2617 2807 +
Chr2	stalkie_big_nohaplotig	exon	121030128	121031202	100	-	.	Parent=FBgn0015541.1.mrna1;Target=FBgn0015541.1 1542 2616 +
Chr2	stalkie_big_nohaplotig	exon	121032340	121032657	100	-	.	Parent=FBgn0015541.1.mrna1;Target=FBgn0015541.1 1224 1541 +
Chr2	stalkie_big_nohaplotig	exon	121032832	121032984	100	-	.	Parent=FBgn0015541.1.mrna1;Target=FBgn0015541.1 1071 1223 +
Chr2	stalkie_big_nohaplotig	exon	121033286	121033645	100	-	.	Parent=FBgn0015541.1.mrna1;Target=FBgn0015541.1 711 1070 +
Chr2	stalkie_big_nohaplotig	exon	121043347	121043595	100	-	.	Parent=FBgn0015541.1.mrna1;Target=FBgn0015541.1 462 710 +
Chr2	stalkie_big_nohaplotig	exon	121044535	121044697	100	-	.	Parent=FBgn0015541.1.mrna1;Target=FBgn0015541.1 299 461 +
Chr2	stalkie_big_nohaplotig	exon	121052788	121053085	99	-	.	Parent=FBgn0015541.1.mrna1;Target=FBgn0015541.1 1 298 +
Chr2	stalkie_big_nohaplotig	CDS	121028519	121028771	.	-	1	Parent=FBgn0015541.1.mrna1;Target=FBgn0015541.1 3120 3372 +
Chr2	stalkie_big_nohaplotig	CDS	121028837	121028980	.	-	1	Parent=FBgn0015541.1.mrna1;Target=FBgn0015541.1 2976 3119 +
Chr2	stalkie_big_nohaplotig	CDS	121029047	121029214	.	-	1	Parent=FBgn0015541.1.mrna1;Target=FBgn0015541.1 2808 2975 +
Chr2	stalkie_big_nohaplotig	CDS	121029820	121030010	.	-	0	Parent=FBgn0015541.1.mrna1;Target=FBgn0015541.1 2617 2807 +
Chr2	stalkie_big_nohaplotig	CDS	121030128	121031202	.	-	1	Parent=FBgn0015541.1.mrna1;Target=FBgn0015541.1 1542 2616 +
Chr2	stalkie_big_nohaplotig	CDS	121032340	121032657	.	-	1	Parent=FBgn0015541.1.mrna1;Target=FBgn0015541.1 1224 1541 +
Chr2	stalkie_big_nohaplotig	CDS	121032832	121032984	.	-	1	Parent=FBgn0015541.1.mrna1;Target=FBgn0015541.1 1071 1223 +
Chr2	stalkie_big_nohaplotig	CDS	121033286	121033645	.	-	1	Parent=FBgn0015541.1.mrna1;Target=FBgn0015541.1 711 1070 +
Chr2	stalkie_big_nohaplotig	CDS	121043347	121043595	.	-	1	Parent=FBgn0015541.1.mrna1;Target=FBgn0015541.1 462 710 +
Chr2	stalkie_big_nohaplotig	CDS	121044535	121044697	.	-	2	Parent=FBgn0015541.1.mrna1;Target=FBgn0015541.1 299 461 +
Chr2	stalkie_big_nohaplotig	CDS	121052788	121053085	.	-	0	Parent=FBgn0015541.1.mrna1;Target=FBgn0015541.1 1 298 +
Chr2	gffcl	locus	121096300	121098152	.	+	.	ID=RLOC_00021120;geneIDs=comp153782_c0_seq1.path1;transcripts=comp153782_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121096300	121098152	.	+	.	ID=comp153782_c0_seq1.mrna1;geneID=comp153782_c0_seq1.path1;Name=comp153782_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=1853;mismatches=0;indels=0;unknowns=0;Target=comp153782_c0_seq1 1853 1 .;CDS_Target=comp153782_c0_seq1 621 466 .;locus=RLOC_00021120
Chr2	stalkie_big_nohaplotig	exon	121096300	121098152	100	+	.	Parent=comp153782_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	121096765	121096920	.	+	0	Parent=comp153782_c0_seq1.mrna1
Chr2	gffcl	locus	121128815	121129697	.	+	.	ID=RLOC_00021121;geneIDs=ORF2253.path1;transcripts=ORF2253.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121128815	121129697	.	+	.	ID=ORF2253.mrna1;geneID=ORF2253.path1;Name=ORF2253;Dir=indeterminatecoverage=100.0;identity=98.4;matches=877;mismatches=6;indels=8;unknowns=0;Target=ORF2253 891 1 .;locus=RLOC_00021121
Chr2	stalkie_big_nohaplotig	exon	121128815	121129697	98	+	.	Parent=ORF2253.mrna1
Chr2	stalkie_big_nohaplotig	CDS	121128815	121129697	.	+	0	Parent=ORF2253.mrna1
Chr2	gffcl	locus	121134242	121134617	.	+	.	ID=RLOC_00021122;geneIDs=comp160456_c0_seq1.path2;transcripts=comp160456_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	121134242	121134617	.	+	.	ID=comp160456_c0_seq1.mrna2;geneID=comp160456_c0_seq1.path2;Name=comp160456_c0_seq1;Dir=indeterminatecoverage=17.2;identity=98.4;matches=376;mismatches=0;indels=6;unknowns=0;Target=comp160456_c0_seq1 2203 1822 .;locus=RLOC_00021122
Chr2	stalkie_big_nohaplotig	exon	121134242	121134617	98	+	.	Parent=comp160456_c0_seq1.mrna2
Chr2	gffcl	locus	121135730	121137629	.	+	.	ID=RLOC_00021123;geneIDs=comp157934_c0_seq1.path1;transcripts=comp157934_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121135730	121137629	.	+	.	ID=comp157934_c0_seq1.mrna1;geneID=comp157934_c0_seq1.path1;Name=comp157934_c0_seq1;Dir=indeterminatecoverage=92.4;identity=99.8;matches=1896;mismatches=4;indels=0;unknowns=0;Target=comp157934_c0_seq1 1900 1 .;CDS_Target=comp157934_c0_seq1 750 1 .;locus=RLOC_00021123
Chr2	stalkie_big_nohaplotig	exon	121135730	121137629	99	+	.	Parent=comp157934_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	121135730	121136479	.	+	0	Parent=comp157934_c0_seq1.mrna1
Chr2	gffcl	locus	121167962	121170014	.	-	.	ID=RLOC_00021124;geneIDs=FBgn0004510.1.path1;transcripts=FBgn0004510.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121167962	121170014	.	-	.	ID=FBgn0004510.1.mrna1;geneID=FBgn0004510.1.path1;Name=FBgn0004510.1;Dir=sensecoverage=100.0;identity=99.2;matches=1303;mismatches=11;indels=0;unknowns=0;locus=RLOC_00021124
Chr2	stalkie_big_nohaplotig	exon	121167962	121168392	99	-	.	Parent=FBgn0004510.1.mrna1;Target=FBgn0004510.1 884 1314 +
Chr2	stalkie_big_nohaplotig	exon	121168791	121169052	99	-	.	Parent=FBgn0004510.1.mrna1;Target=FBgn0004510.1 622 883 +
Chr2	stalkie_big_nohaplotig	exon	121169130	121169377	98	-	.	Parent=FBgn0004510.1.mrna1;Target=FBgn0004510.1 374 621 +
Chr2	stalkie_big_nohaplotig	exon	121169461	121169593	100	-	.	Parent=FBgn0004510.1.mrna1;Target=FBgn0004510.1 241 373 +
Chr2	stalkie_big_nohaplotig	exon	121169647	121169716	100	-	.	Parent=FBgn0004510.1.mrna1;Target=FBgn0004510.1 171 240 +
Chr2	stalkie_big_nohaplotig	exon	121169782	121169875	97	-	.	Parent=FBgn0004510.1.mrna1;Target=FBgn0004510.1 77 170 +
Chr2	stalkie_big_nohaplotig	exon	121169939	121170014	100	-	.	Parent=FBgn0004510.1.mrna1;Target=FBgn0004510.1 1 76 +
Chr2	stalkie_big_nohaplotig	CDS	121167962	121168392	.	-	2	Parent=FBgn0004510.1.mrna1;Target=FBgn0004510.1 884 1314 +
Chr2	stalkie_big_nohaplotig	CDS	121168791	121169052	.	-	0	Parent=FBgn0004510.1.mrna1;Target=FBgn0004510.1 622 883 +
Chr2	stalkie_big_nohaplotig	CDS	121169130	121169377	.	-	2	Parent=FBgn0004510.1.mrna1;Target=FBgn0004510.1 374 621 +
Chr2	stalkie_big_nohaplotig	CDS	121169461	121169593	.	-	0	Parent=FBgn0004510.1.mrna1;Target=FBgn0004510.1 241 373 +
Chr2	stalkie_big_nohaplotig	CDS	121169647	121169716	.	-	1	Parent=FBgn0004510.1.mrna1;Target=FBgn0004510.1 171 240 +
Chr2	stalkie_big_nohaplotig	CDS	121169782	121169875	.	-	2	Parent=FBgn0004510.1.mrna1;Target=FBgn0004510.1 77 170 +
Chr2	stalkie_big_nohaplotig	CDS	121169939	121170014	.	-	0	Parent=FBgn0004510.1.mrna1;Target=FBgn0004510.1 1 76 +
Chr2	gffcl	locus	121175824	121237868	.	-	.	ID=RLOC_00021125;geneIDs=FBgn0004359.1.path1;transcripts=FBgn0004359.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121175824	121237868	.	-	.	ID=FBgn0004359.1.mrna1;geneID=FBgn0004359.1.path1;Name=FBgn0004359.1;Dir=sensecoverage=100.0;identity=100.0;matches=1551;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021125
Chr2	stalkie_big_nohaplotig	exon	121175824	121176800	100	-	.	Parent=FBgn0004359.1.mrna1;Target=FBgn0004359.1 575 1551 +
Chr2	stalkie_big_nohaplotig	exon	121237295	121237868	100	-	.	Parent=FBgn0004359.1.mrna1;Target=FBgn0004359.1 1 574 +
Chr2	stalkie_big_nohaplotig	CDS	121175824	121176800	.	-	2	Parent=FBgn0004359.1.mrna1;Target=FBgn0004359.1 575 1551 +
Chr2	stalkie_big_nohaplotig	CDS	121237295	121237868	.	-	0	Parent=FBgn0004359.1.mrna1;Target=FBgn0004359.1 1 574 +
Chr2	gffcl	locus	121178642	121179780	.	-	.	ID=RLOC_00021126;geneIDs=comp147837_c0_seq1.path1;transcripts=comp147837_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121178642	121179780	.	-	.	ID=comp147837_c0_seq1.mrna1;geneID=comp147837_c0_seq1.path1;Name=comp147837_c0_seq1;Dir=indeterminatecoverage=99.3;identity=99.6;matches=1135;mismatches=4;indels=0;unknowns=0;Target=comp147837_c0_seq1 1147 9 .;CDS_Target=comp147837_c0_seq1 179 9 .;locus=RLOC_00021126
Chr2	stalkie_big_nohaplotig	exon	121178642	121179780	99	-	.	Parent=comp147837_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	121179610	121179780	.	-	0	Parent=comp147837_c0_seq1.mrna1
Chr2	gffcl	locus	121238054	121242403	.	-	.	ID=RLOC_00021127;geneIDs=comp135619_c0_seq1.path1;transcripts=comp135619_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121238054	121242403	.	-	.	ID=comp135619_c0_seq1.mrna1;geneID=comp135619_c0_seq1.path1;Name=comp135619_c0_seq1;Dir=sensecoverage=98.3;identity=99.8;matches=1002;mismatches=1;indels=1;unknowns=0;Target=comp135619_c0_seq1 19 90 +;locus=RLOC_00021127
Chr2	stalkie_big_nohaplotig	exon	121238054	121238360	99	-	.	Parent=comp135619_c0_seq1.mrna1;Target=comp135619_c0_seq1 714 1021 +
Chr2	stalkie_big_nohaplotig	exon	121241708	121242403	100	-	.	Parent=comp135619_c0_seq1.mrna1;Target=comp135619_c0_seq1 18 713 +
Chr2	stalkie_big_nohaplotig	CDS	121242331	121242402	.	-	0	Parent=comp135619_c0_seq1.mrna1
Chr2	gffcl	locus	121245160	121246904	.	-	.	ID=RLOC_00021128;geneIDs=FBgn0038649.1.path1;transcripts=FBgn0038649.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121245160	121246904	.	-	.	ID=FBgn0038649.1.mrna1;geneID=FBgn0038649.1.path1;Name=FBgn0038649.1;Dir=sensecoverage=100.0;identity=99.9;matches=1502;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021128
Chr2	stalkie_big_nohaplotig	exon	121245160	121245409	99	-	.	Parent=FBgn0038649.1.mrna1;Target=FBgn0038649.1 1254 1503 +
Chr2	stalkie_big_nohaplotig	exon	121245524	121245690	100	-	.	Parent=FBgn0038649.1.mrna1;Target=FBgn0038649.1 1087 1253 +
Chr2	stalkie_big_nohaplotig	exon	121245755	121245963	100	-	.	Parent=FBgn0038649.1.mrna1;Target=FBgn0038649.1 878 1086 +
Chr2	stalkie_big_nohaplotig	exon	121246028	121246904	100	-	.	Parent=FBgn0038649.1.mrna1;Target=FBgn0038649.1 1 877 +
Chr2	stalkie_big_nohaplotig	CDS	121245160	121245409	.	-	1	Parent=FBgn0038649.1.mrna1;Target=FBgn0038649.1 1254 1503 +
Chr2	stalkie_big_nohaplotig	CDS	121245524	121245690	.	-	0	Parent=FBgn0038649.1.mrna1;Target=FBgn0038649.1 1087 1253 +
Chr2	stalkie_big_nohaplotig	CDS	121245755	121245963	.	-	2	Parent=FBgn0038649.1.mrna1;Target=FBgn0038649.1 878 1086 +
Chr2	stalkie_big_nohaplotig	CDS	121246028	121246904	.	-	0	Parent=FBgn0038649.1.mrna1;Target=FBgn0038649.1 1 877 +
Chr2	gffcl	locus	121254811	121362725	.	.	.	ID=RLOC_00021129;geneIDs=FBgn0014141.1.path1,comp148322_c0_seq1.path1,comp154373_c0_seq1.path1,comp475488_c0_seq1.path1;transcripts=comp154373_c0_seq1.mrna1,FBgn0014141.1.mrna1,comp475488_c0_seq1.mrna1,comp148322_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121254811	121344647	.	-	.	ID=comp154373_c0_seq1.mrna1;geneID=comp154373_c0_seq1.path1;Name=comp154373_c0_seq1;Dir=antisensecoverage=99.9;identity=99.5;matches=7634;mismatches=7;indels=30;unknowns=0;locus=RLOC_00021129
Chr2	stalkie_big_nohaplotig	exon	121254811	121255534	100	-	.	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 1 724 -
Chr2	stalkie_big_nohaplotig	exon	121255638	121255844	99	-	.	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 725 932 -
Chr2	stalkie_big_nohaplotig	exon	121255912	121256427	100	-	.	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 933 1448 -
Chr2	stalkie_big_nohaplotig	exon	121256501	121257809	99	-	.	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 1449 2758 -
Chr2	stalkie_big_nohaplotig	exon	121259093	121259262	100	-	.	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 2759 2928 -
Chr2	stalkie_big_nohaplotig	exon	121259333	121259473	100	-	.	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 2929 3069 -
Chr2	stalkie_big_nohaplotig	exon	121279486	121279585	100	-	.	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 3070 3169 -
Chr2	stalkie_big_nohaplotig	exon	121279697	121279725	100	-	.	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 3170 3198 -
Chr2	stalkie_big_nohaplotig	exon	121295400	121295448	100	-	.	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 3199 3247 -
Chr2	stalkie_big_nohaplotig	exon	121305033	121305168	100	-	.	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 3248 3383 -
Chr2	stalkie_big_nohaplotig	exon	121305259	121305711	99	-	.	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 3384 3836 -
Chr2	stalkie_big_nohaplotig	exon	121305774	121306578	99	-	.	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 3837 4641 -
Chr2	stalkie_big_nohaplotig	exon	121308712	121309098	100	-	.	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 4642 5028 -
Chr2	stalkie_big_nohaplotig	exon	121309155	121310447	99	-	.	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 5029 6321 -
Chr2	stalkie_big_nohaplotig	exon	121310522	121310613	100	-	.	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 6322 6413 -
Chr2	stalkie_big_nohaplotig	exon	121313223	121313558	100	-	.	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 6414 6749 -
Chr2	stalkie_big_nohaplotig	exon	121313622	121313766	100	-	.	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 6750 6894 -
Chr2	stalkie_big_nohaplotig	exon	121339552	121339891	99	-	.	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 6895 7234 -
Chr2	stalkie_big_nohaplotig	exon	121344222	121344647	93	-	.	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 7235 7654 -
Chr2	stalkie_big_nohaplotig	CDS	121257337	121257809	.	-	0	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 2285 2758 .
Chr2	stalkie_big_nohaplotig	CDS	121259093	121259262	.	-	2	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 2759 2928 .
Chr2	stalkie_big_nohaplotig	CDS	121259333	121259473	.	-	2	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 2929 3069 .
Chr2	stalkie_big_nohaplotig	CDS	121279486	121279585	.	-	0	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 3070 3169 .
Chr2	stalkie_big_nohaplotig	CDS	121279697	121279725	.	-	2	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 3170 3198 .
Chr2	stalkie_big_nohaplotig	CDS	121295400	121295448	.	-	0	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 3199 3247 .
Chr2	stalkie_big_nohaplotig	CDS	121305033	121305168	.	-	1	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 3248 3383 .
Chr2	stalkie_big_nohaplotig	CDS	121305259	121305711	.	-	1	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 3384 3836 .
Chr2	stalkie_big_nohaplotig	CDS	121305774	121306578	.	-	2	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 3837 4641 .
Chr2	stalkie_big_nohaplotig	CDS	121308712	121309098	.	-	2	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 4642 5028 .
Chr2	stalkie_big_nohaplotig	CDS	121309155	121310447	.	-	2	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 5029 6321 .
Chr2	stalkie_big_nohaplotig	CDS	121310522	121310613	.	-	1	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 6322 6413 .
Chr2	stalkie_big_nohaplotig	CDS	121313223	121313558	.	-	1	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 6414 6749 .
Chr2	stalkie_big_nohaplotig	CDS	121313622	121313766	.	-	2	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 6750 6894 .
Chr2	stalkie_big_nohaplotig	CDS	121339552	121339891	.	-	0	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 6895 7234 .
Chr2	stalkie_big_nohaplotig	CDS	121344222	121344647	.	-	0	Parent=comp154373_c0_seq1.mrna1;Target=comp154373_c0_seq1 7235 7654 .
Chr2	stalkie_big_nohaplotig	mRNA	121257340	121344650	.	-	.	ID=FBgn0014141.1.mrna1;geneID=FBgn0014141.1.path1;Name=FBgn0014141.1;Dir=sensecoverage=100.0;identity=99.8;matches=5367;mismatches=8;indels=1;unknowns=0;locus=RLOC_00021129
Chr2	stalkie_big_nohaplotig	exon	121257340	121257809	99	-	.	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 4906 5376 +
Chr2	stalkie_big_nohaplotig	exon	121259093	121259262	100	-	.	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 4736 4905 +
Chr2	stalkie_big_nohaplotig	exon	121259333	121259473	100	-	.	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 4595 4735 +
Chr2	stalkie_big_nohaplotig	exon	121279486	121279585	100	-	.	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 4495 4594 +
Chr2	stalkie_big_nohaplotig	exon	121295371	121295448	100	-	.	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 4417 4494 +
Chr2	stalkie_big_nohaplotig	exon	121305033	121305168	100	-	.	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 4281 4416 +
Chr2	stalkie_big_nohaplotig	exon	121305259	121305711	99	-	.	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 3828 4280 +
Chr2	stalkie_big_nohaplotig	exon	121305774	121306578	99	-	.	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 3023 3827 +
Chr2	stalkie_big_nohaplotig	exon	121308712	121309098	100	-	.	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 2636 3022 +
Chr2	stalkie_big_nohaplotig	exon	121309155	121310447	99	-	.	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 1343 2635 +
Chr2	stalkie_big_nohaplotig	exon	121310522	121310613	100	-	.	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 1251 1342 +
Chr2	stalkie_big_nohaplotig	exon	121313223	121313558	100	-	.	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 915 1250 +
Chr2	stalkie_big_nohaplotig	exon	121313622	121313766	100	-	.	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 770 914 +
Chr2	stalkie_big_nohaplotig	exon	121339552	121339891	99	-	.	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 430 769 +
Chr2	stalkie_big_nohaplotig	exon	121344222	121344650	99	-	.	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 1 429 +
Chr2	stalkie_big_nohaplotig	CDS	121257340	121257809	.	-	0	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 4906 5376 +
Chr2	stalkie_big_nohaplotig	CDS	121259093	121259262	.	-	2	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 4736 4905 +
Chr2	stalkie_big_nohaplotig	CDS	121259333	121259473	.	-	2	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 4595 4735 +
Chr2	stalkie_big_nohaplotig	CDS	121279486	121279585	.	-	0	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 4495 4594 +
Chr2	stalkie_big_nohaplotig	CDS	121295371	121295448	.	-	0	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 4417 4494 +
Chr2	stalkie_big_nohaplotig	CDS	121305033	121305168	.	-	1	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 4281 4416 +
Chr2	stalkie_big_nohaplotig	CDS	121305259	121305711	.	-	1	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 3828 4280 +
Chr2	stalkie_big_nohaplotig	CDS	121305774	121306578	.	-	2	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 3023 3827 +
Chr2	stalkie_big_nohaplotig	CDS	121308712	121309098	.	-	2	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 2636 3022 +
Chr2	stalkie_big_nohaplotig	CDS	121309155	121310447	.	-	2	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 1343 2635 +
Chr2	stalkie_big_nohaplotig	CDS	121310522	121310613	.	-	1	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 1251 1342 +
Chr2	stalkie_big_nohaplotig	CDS	121313223	121313558	.	-	1	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 915 1250 +
Chr2	stalkie_big_nohaplotig	CDS	121313622	121313766	.	-	2	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 770 914 +
Chr2	stalkie_big_nohaplotig	CDS	121339552	121339891	.	-	0	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 430 769 +
Chr2	stalkie_big_nohaplotig	CDS	121344222	121344650	.	-	0	Parent=FBgn0014141.1.mrna1;Target=FBgn0014141.1 1 429 +
Chr2	stalkie_big_nohaplotig	mRNA	121304790	121305055	.	+	.	ID=comp475488_c0_seq1.mrna1;geneID=comp475488_c0_seq1.path1;Name=comp475488_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=266;mismatches=0;indels=0;unknowns=0;Target=comp475488_c0_seq1 266 1 .;CDS_Target=comp475488_c0_seq1 223 2 .;locus=RLOC_00021129
Chr2	stalkie_big_nohaplotig	exon	121304790	121305055	100	+	.	Parent=comp475488_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	121304791	121305012	.	+	0	Parent=comp475488_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121344632	121362725	.	-	.	ID=comp148322_c0_seq1.mrna1;geneID=comp148322_c0_seq1.path1;Name=comp148322_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=561;mismatches=0;indels=0;unknowns=0;Target=comp148322_c0_seq1 220 441 .;locus=RLOC_00021129
Chr2	stalkie_big_nohaplotig	exon	121344632	121344692	100	-	.	Parent=comp148322_c0_seq1.mrna1;Target=comp148322_c0_seq1 1 61 -
Chr2	stalkie_big_nohaplotig	exon	121344942	121345394	100	-	.	Parent=comp148322_c0_seq1.mrna1;Target=comp148322_c0_seq1 62 514 -
Chr2	stalkie_big_nohaplotig	exon	121362679	121362725	100	-	.	Parent=comp148322_c0_seq1.mrna1;Target=comp148322_c0_seq1 515 561 -
Chr2	stalkie_big_nohaplotig	CDS	121345100	121345321	.	-	0	Parent=comp148322_c0_seq1.mrna1
Chr2	gffcl	locus	121271777	121272111	.	-	.	ID=RLOC_00021130;geneIDs=comp47877_c0_seq1.path1;transcripts=comp47877_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121271777	121272111	.	-	.	ID=comp47877_c0_seq1.mrna1;geneID=comp47877_c0_seq1.path1;Name=comp47877_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=335;mismatches=0;indels=0;unknowns=0;Target=comp47877_c0_seq1 335 1 .;CDS_Target=comp47877_c0_seq1 142 2 .;locus=RLOC_00021130
Chr2	stalkie_big_nohaplotig	exon	121271777	121272111	100	-	.	Parent=comp47877_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	121271970	121272110	.	-	0	Parent=comp47877_c0_seq1.mrna1
Chr2	gffcl	locus	121281216	121281820	.	-	.	ID=RLOC_00021131;geneIDs=comp146872_c0_seq1.path1;transcripts=comp146872_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121281216	121281820	.	-	.	ID=comp146872_c0_seq1.mrna1;geneID=comp146872_c0_seq1.path1;Name=comp146872_c0_seq1;Dir=indeterminatecoverage=98.7;identity=100.0;matches=605;mismatches=0;indels=0;unknowns=0;Target=comp146872_c0_seq1 613 9 .;CDS_Target=comp146872_c0_seq1 354 82 .;locus=RLOC_00021131
Chr2	stalkie_big_nohaplotig	exon	121281216	121281820	100	-	.	Parent=comp146872_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	121281475	121281747	.	-	0	Parent=comp146872_c0_seq1.mrna1
Chr2	gffcl	locus	121296550	121297047	.	+	.	ID=RLOC_00021132;geneIDs=comp118874_c0_seq1.path1;transcripts=comp118874_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121296550	121297047	.	+	.	ID=comp118874_c0_seq1.mrna1;geneID=comp118874_c0_seq1.path1;Name=comp118874_c0_seq1;Dir=indeterminatecoverage=83.1;identity=90.4;matches=488;mismatches=10;indels=42;unknowns=0;Target=comp118874_c0_seq1 540 1 .;CDS_Target=comp118874_c0_seq1 321 262 .;locus=RLOC_00021132
Chr2	stalkie_big_nohaplotig	exon	121296550	121297047	90	+	.	Parent=comp118874_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	121296811	121296865	.	+	0	Parent=comp118874_c0_seq1.mrna1
Chr2	gffcl	locus	121312221	121312739	.	-	.	ID=RLOC_00021133;geneIDs=comp150162_c0_seq1.path1;transcripts=comp150162_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121312221	121312739	.	-	.	ID=comp150162_c0_seq1.mrna1;geneID=comp150162_c0_seq1.path1;Name=comp150162_c0_seq1;Dir=indeterminatecoverage=99.0;identity=100.0;matches=519;mismatches=0;indels=0;unknowns=0;Target=comp150162_c0_seq1 523 5 .;CDS_Target=comp150162_c0_seq1 319 131 .;locus=RLOC_00021133
Chr2	stalkie_big_nohaplotig	exon	121312221	121312739	100	-	.	Parent=comp150162_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	121312425	121312613	.	-	0	Parent=comp150162_c0_seq1.mrna1
Chr2	gffcl	locus	121364270	121365130	.	-	.	ID=RLOC_00021134;geneIDs=FBgn0038479.1.path1;transcripts=FBgn0038479.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121364270	121365130	.	-	.	ID=FBgn0038479.1.mrna1;geneID=FBgn0038479.1.path1;Name=FBgn0038479.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=861;mismatches=0;indels=0;unknowns=0;Target=FBgn0038479.1 861 1 .;locus=RLOC_00021134
Chr2	stalkie_big_nohaplotig	exon	121364270	121365130	100	-	.	Parent=FBgn0038479.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	121364270	121365130	.	-	0	Parent=FBgn0038479.1.mrna1
Chr2	gffcl	locus	121370316	121370422	.	-	.	ID=RLOC_00021135;geneIDs=comp135179_c1_seq1.path2;transcripts=comp135179_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	121370316	121370422	.	-	.	ID=comp135179_c1_seq1.mrna2;geneID=comp135179_c1_seq1.path2;Name=comp135179_c1_seq1;Dir=indeterminatecoverage=24.0;identity=100.0;matches=107;mismatches=0;indels=0;unknowns=0;Target=comp135179_c1_seq1 446 340 .;locus=RLOC_00021135
Chr2	stalkie_big_nohaplotig	exon	121370316	121370422	100	-	.	Parent=comp135179_c1_seq1.mrna2
Chr2	gffcl	locus	121373095	121381759	.	-	.	ID=RLOC_00021136;geneIDs=CPIJ018005.1.path1;transcripts=CPIJ018005.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121373095	121381759	.	-	.	ID=CPIJ018005.1.mrna1;geneID=CPIJ018005.1.path1;Name=CPIJ018005.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=8619;mismatches=25;indels=23;unknowns=0;Target=CPIJ018005.1 8646 1 .;CDS_Target=CPIJ018005.1 59 3 .;locus=RLOC_00021136
Chr2	stalkie_big_nohaplotig	exon	121373095	121381759	99	-	.	Parent=CPIJ018005.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	121381702	121381757	.	-	0	Parent=CPIJ018005.1.mrna1
Chr2	gffcl	locus	121460367	121460940	.	-	.	ID=RLOC_00021138;geneIDs=FBgn0263144.1.path1;transcripts=FBgn0263144.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121460367	121460940	.	-	.	ID=FBgn0263144.1.mrna1;geneID=FBgn0263144.1.path1;Name=FBgn0263144.1;Dir=indeterminatecoverage=23.2;identity=100.0;matches=574;mismatches=0;indels=0;unknowns=0;Target=FBgn0263144.1 773 200 .;CDS_Target=FBgn0263144.1 773 707 .;locus=RLOC_00021138
Chr2	stalkie_big_nohaplotig	exon	121460367	121460940	100	-	.	Parent=FBgn0263144.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	121460367	121460433	.	-	0	Parent=FBgn0263144.1.mrna1
Chr2	gffcl	locus	121472010	121472449	.	-	.	ID=RLOC_00021139;geneIDs=comp103186_c0_seq1.path1;transcripts=comp103186_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121472010	121472449	.	-	.	ID=comp103186_c0_seq1.mrna1;geneID=comp103186_c0_seq1.path1;Name=comp103186_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=440;mismatches=0;indels=0;unknowns=0;Target=comp103186_c0_seq1 440 1 .;CDS_Target=comp103186_c0_seq1 73 2 .;locus=RLOC_00021139
Chr2	stalkie_big_nohaplotig	exon	121472010	121472449	100	-	.	Parent=comp103186_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	121472377	121472448	.	-	0	Parent=comp103186_c0_seq1.mrna1
Chr2	gffcl	locus	121553195	121554973	.	+	.	ID=RLOC_00021140;geneIDs=FBgn0037138.1.path1;transcripts=FBgn0037138.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121553195	121554973	.	+	.	ID=FBgn0037138.1.mrna1;geneID=FBgn0037138.1.path1;Name=FBgn0037138.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1768;mismatches=11;indels=0;unknowns=0;Target=FBgn0037138.1 1779 1 .;locus=RLOC_00021140
Chr2	stalkie_big_nohaplotig	exon	121553195	121554973	99	+	.	Parent=FBgn0037138.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	121553195	121554973	.	+	0	Parent=FBgn0037138.1.mrna1
Chr2	gffcl	locus	121574588	121574976	.	-	.	ID=RLOC_00021141;geneIDs=comp125282_c0_seq1.path1;transcripts=comp125282_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121574588	121574976	.	-	.	ID=comp125282_c0_seq1.mrna1;geneID=comp125282_c0_seq1.path1;Name=comp125282_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.7;matches=387;mismatches=2;indels=3;unknowns=0;Target=comp125282_c0_seq1 392 1 .;CDS_Target=comp125282_c0_seq1 347 240 .;locus=RLOC_00021141
Chr2	stalkie_big_nohaplotig	exon	121574588	121574976	98	-	.	Parent=comp125282_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	121574633	121574739	.	-	0	Parent=comp125282_c0_seq1.mrna1
Chr2	gffcl	locus	121614927	121615892	.	+	.	ID=RLOC_00021142;geneIDs=comp116698_c0_seq1.path1;transcripts=comp116698_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121614927	121615892	.	+	.	ID=comp116698_c0_seq1.mrna1;geneID=comp116698_c0_seq1.path1;Name=comp116698_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.7;matches=963;mismatches=3;indels=0;unknowns=0;Target=comp116698_c0_seq1 971 6 .;CDS_Target=comp116698_c0_seq1 657 433 .;locus=RLOC_00021142
Chr2	stalkie_big_nohaplotig	exon	121614927	121615892	99	+	.	Parent=comp116698_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	121615354	121615578	.	+	0	Parent=comp116698_c0_seq1.mrna1
Chr2	gffcl	locus	121643999	121644529	.	+	.	ID=RLOC_00021143;geneIDs=comp145482_c0_seq1.path1;transcripts=comp145482_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121643999	121644529	.	+	.	ID=comp145482_c0_seq1.mrna1;geneID=comp145482_c0_seq1.path1;Name=comp145482_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.6;matches=529;mismatches=2;indels=0;unknowns=0;Target=comp145482_c0_seq1 532 2 .;CDS_Target=comp145482_c0_seq1 516 445 .;locus=RLOC_00021143
Chr2	stalkie_big_nohaplotig	exon	121643999	121644529	99	+	.	Parent=comp145482_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	121644442	121644513	.	+	0	Parent=comp145482_c0_seq1.mrna1
Chr2	gffcl	locus	121711450	121711707	.	+	.	ID=RLOC_00021144;geneIDs=FBgn0053870.path2;transcripts=FBgn0053870.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	121711450	121711707	.	+	.	ID=FBgn0053870.mrna2;geneID=FBgn0053870.path2;Name=FBgn0053870;Dir=indeterminatecoverage=100.0;identity=100.0;matches=258;mismatches=0;indels=0;unknowns=0;Target=FBgn0053870 258 1 .;locus=RLOC_00021144
Chr2	stalkie_big_nohaplotig	exon	121711450	121711707	100	+	.	Parent=FBgn0053870.mrna2
Chr2	stalkie_big_nohaplotig	CDS	121711450	121711707	.	+	0	Parent=FBgn0053870.mrna2
Chr2	gffcl	locus	121722036	121723050	.	-	.	ID=RLOC_00021145;geneIDs=FBgn0039471.7.path1;transcripts=FBgn0039471.7.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121722036	121723050	.	-	.	ID=FBgn0039471.7.mrna1;geneID=FBgn0039471.7.path1;Name=FBgn0039471.7;Dir=sensecoverage=99.6;identity=100.0;matches=902;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021145
Chr2	stalkie_big_nohaplotig	exon	121722036	121722741	100	-	.	Parent=FBgn0039471.7.mrna1;Target=FBgn0039471.7 201 906 +
Chr2	stalkie_big_nohaplotig	exon	121722802	121722949	100	-	.	Parent=FBgn0039471.7.mrna1;Target=FBgn0039471.7 53 200 +
Chr2	stalkie_big_nohaplotig	exon	121723003	121723050	100	-	.	Parent=FBgn0039471.7.mrna1;Target=FBgn0039471.7 5 52 +
Chr2	stalkie_big_nohaplotig	CDS	121722036	121722741	.	-	1	Parent=FBgn0039471.7.mrna1;Target=FBgn0039471.7 201 906 +
Chr2	stalkie_big_nohaplotig	CDS	121722802	121722949	.	-	2	Parent=FBgn0039471.7.mrna1;Target=FBgn0039471.7 53 200 +
Chr2	stalkie_big_nohaplotig	CDS	121723003	121723048	.	-	0	Parent=FBgn0039471.7.mrna1;Target=FBgn0039471.7 7 52 +
Chr2	gffcl	locus	121790834	121813524	.	-	.	ID=RLOC_00021146;geneIDs=comp156292_c0_seq1.path1;transcripts=comp156292_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121790834	121813524	.	-	.	ID=comp156292_c0_seq1.mrna1;geneID=comp156292_c0_seq1.path1;Name=comp156292_c0_seq1;Dir=sensecoverage=64.3;identity=96.4;matches=587;mismatches=13;indels=9;unknowns=0;locus=RLOC_00021146
Chr2	stalkie_big_nohaplotig	exon	121790834	121790845	91	-	.	Parent=comp156292_c0_seq1.mrna1;Target=comp156292_c0_seq1 620 631 +
Chr2	stalkie_big_nohaplotig	exon	121801689	121801703	73	-	.	Parent=comp156292_c0_seq1.mrna1;Target=comp156292_c0_seq1 609 619 +
Chr2	stalkie_big_nohaplotig	exon	121810340	121810365	57	-	.	Parent=comp156292_c0_seq1.mrna1;Target=comp156292_c0_seq1 577 598 +
Chr2	stalkie_big_nohaplotig	exon	121812521	121812842	99	-	.	Parent=comp156292_c0_seq1.mrna1;Target=comp156292_c0_seq1 234 555 +
Chr2	stalkie_big_nohaplotig	exon	121813291	121813524	98	-	.	Parent=comp156292_c0_seq1.mrna1;Target=comp156292_c0_seq1 1 233 +
Chr2	stalkie_big_nohaplotig	CDS	121812546	121812842	.	-	0	Parent=comp156292_c0_seq1.mrna1;Target=comp156292_c0_seq1 234 530 +
Chr2	stalkie_big_nohaplotig	CDS	121813291	121813410	.	-	0	Parent=comp156292_c0_seq1.mrna1;Target=comp156292_c0_seq1 114 233 +
Chr2	gffcl	locus	121796304	121798166	.	+	.	ID=RLOC_00021147;geneIDs=comp152415_c0_seq1.path1;transcripts=comp152415_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121796304	121798166	.	+	.	ID=comp152415_c0_seq1.mrna1;geneID=comp152415_c0_seq1.path1;Name=comp152415_c0_seq1;Dir=antisensecoverage=97.4;identity=99.3;matches=891;mismatches=6;indels=0;unknowns=0;locus=RLOC_00021147
Chr2	stalkie_big_nohaplotig	exon	121796304	121796486	100	+	.	Parent=comp152415_c0_seq1.mrna1;Target=comp152415_c0_seq1 726 908 -
Chr2	stalkie_big_nohaplotig	exon	121797358	121797518	98	+	.	Parent=comp152415_c0_seq1.mrna1;Target=comp152415_c0_seq1 565 725 -
Chr2	stalkie_big_nohaplotig	exon	121797614	121798166	99	+	.	Parent=comp152415_c0_seq1.mrna1;Target=comp152415_c0_seq1 12 564 -
Chr2	stalkie_big_nohaplotig	CDS	121797453	121797518	.	+	0	Parent=comp152415_c0_seq1.mrna1;Target=comp152415_c0_seq1 565 630 .
Chr2	stalkie_big_nohaplotig	CDS	121797614	121798054	.	+	0	Parent=comp152415_c0_seq1.mrna1;Target=comp152415_c0_seq1 124 564 .
Chr2	gffcl	locus	121802556	121802986	.	+	.	ID=RLOC_00021148;geneIDs=FBgn0035011.1.path1;transcripts=FBgn0035011.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121802556	121802986	.	+	.	ID=FBgn0035011.1.mrna1;geneID=FBgn0035011.1.path1;Name=FBgn0035011.1;Dir=antisensecoverage=100.0;identity=98.4;matches=370;mismatches=5;indels=1;unknowns=0;Target=FBgn0035011.1 306 374 .;locus=RLOC_00021148
Chr2	stalkie_big_nohaplotig	exon	121802556	121802793	98	+	.	Parent=FBgn0035011.1.mrna1;Target=FBgn0035011.1 139 375 -
Chr2	stalkie_big_nohaplotig	exon	121802849	121802986	97	+	.	Parent=FBgn0035011.1.mrna1;Target=FBgn0035011.1 1 138 -
Chr2	stalkie_big_nohaplotig	CDS	121802557	121802626	.	+	0	Parent=FBgn0035011.1.mrna1
Chr2	gffcl	locus	121817855	121819160	.	-	.	ID=RLOC_00021149;geneIDs=FBgn0038233.1.path1;transcripts=FBgn0038233.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121817855	121819160	.	-	.	ID=FBgn0038233.1.mrna1;geneID=FBgn0038233.1.path1;Name=FBgn0038233.1;Dir=sensecoverage=100.0;identity=99.8;matches=1240;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021149
Chr2	stalkie_big_nohaplotig	exon	121817855	121818017	100	-	.	Parent=FBgn0038233.1.mrna1;Target=FBgn0038233.1 1080 1242 +
Chr2	stalkie_big_nohaplotig	exon	121818082	121819160	99	-	.	Parent=FBgn0038233.1.mrna1;Target=FBgn0038233.1 1 1079 +
Chr2	stalkie_big_nohaplotig	CDS	121817855	121818017	.	-	1	Parent=FBgn0038233.1.mrna1;Target=FBgn0038233.1 1080 1242 +
Chr2	stalkie_big_nohaplotig	CDS	121818082	121819160	.	-	0	Parent=FBgn0038233.1.mrna1;Target=FBgn0038233.1 1 1079 +
Chr2	gffcl	locus	121820617	121838156	.	+	.	ID=RLOC_00021150;geneIDs=FBgn0038890.1.path1;transcripts=FBgn0038890.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121820617	121838156	.	+	.	ID=FBgn0038890.1.mrna1;geneID=FBgn0038890.1.path1;Name=FBgn0038890.1;Dir=sensecoverage=100.0;identity=99.6;matches=3010;mismatches=10;indels=1;unknowns=0;locus=RLOC_00021150
Chr2	stalkie_big_nohaplotig	exon	121820617	121820758	100	+	.	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 1 142 +
Chr2	stalkie_big_nohaplotig	exon	121831827	121832055	98	+	.	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 143 371 +
Chr2	stalkie_big_nohaplotig	exon	121832126	121832531	100	+	.	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 372 777 +
Chr2	stalkie_big_nohaplotig	exon	121832614	121832735	100	+	.	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 778 899 +
Chr2	stalkie_big_nohaplotig	exon	121834162	121834334	99	+	.	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 900 1072 +
Chr2	stalkie_big_nohaplotig	exon	121834475	121834667	100	+	.	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 1073 1265 +
Chr2	stalkie_big_nohaplotig	exon	121834724	121835051	99	+	.	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 1266 1593 +
Chr2	stalkie_big_nohaplotig	exon	121835118	121835188	98	+	.	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 1594 1664 +
Chr2	stalkie_big_nohaplotig	exon	121835735	121835950	100	+	.	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 1665 1880 +
Chr2	stalkie_big_nohaplotig	exon	121836285	121836521	99	+	.	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 1881 2117 +
Chr2	stalkie_big_nohaplotig	exon	121836584	121836900	99	+	.	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 2118 2434 +
Chr2	stalkie_big_nohaplotig	exon	121837511	121837641	100	+	.	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 2435 2565 +
Chr2	stalkie_big_nohaplotig	exon	121837702	121838156	99	+	.	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 2566 3021 +
Chr2	stalkie_big_nohaplotig	CDS	121820617	121820758	.	+	0	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 1 142 +
Chr2	stalkie_big_nohaplotig	CDS	121831827	121832055	.	+	2	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 143 371 +
Chr2	stalkie_big_nohaplotig	CDS	121832126	121832531	.	+	1	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 372 777 +
Chr2	stalkie_big_nohaplotig	CDS	121832614	121832735	.	+	0	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 778 899 +
Chr2	stalkie_big_nohaplotig	CDS	121834162	121834334	.	+	1	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 900 1072 +
Chr2	stalkie_big_nohaplotig	CDS	121834475	121834667	.	+	2	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 1073 1265 +
Chr2	stalkie_big_nohaplotig	CDS	121834724	121835051	.	+	1	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 1266 1593 +
Chr2	stalkie_big_nohaplotig	CDS	121835118	121835188	.	+	0	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 1594 1664 +
Chr2	stalkie_big_nohaplotig	CDS	121835735	121835950	.	+	1	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 1665 1880 +
Chr2	stalkie_big_nohaplotig	CDS	121836285	121836521	.	+	1	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 1881 2117 +
Chr2	stalkie_big_nohaplotig	CDS	121836584	121836900	.	+	1	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 2118 2434 +
Chr2	stalkie_big_nohaplotig	CDS	121837511	121837641	.	+	2	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 2435 2565 +
Chr2	stalkie_big_nohaplotig	CDS	121837702	121838156	.	+	0	Parent=FBgn0038890.1.mrna1;Target=FBgn0038890.1 2566 3021 +
Chr2	gffcl	locus	121841419	121841798	.	-	.	ID=RLOC_00021151;geneIDs=comp140695_c0_seq1.path1;transcripts=comp140695_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121841419	121841798	.	-	.	ID=comp140695_c0_seq1.mrna1;geneID=comp140695_c0_seq1.path1;Name=comp140695_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=377;mismatches=3;indels=0;unknowns=0;Target=comp140695_c0_seq1 380 1 .;CDS_Target=comp140695_c0_seq1 176 3 .;locus=RLOC_00021151
Chr2	stalkie_big_nohaplotig	exon	121841419	121841798	99	-	.	Parent=comp140695_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	121841623	121841796	.	-	0	Parent=comp140695_c0_seq1.mrna1
Chr2	gffcl	locus	121842281	121842543	.	+	.	ID=RLOC_00021152;geneIDs=comp116758_c0_seq1.path1;transcripts=comp116758_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121842281	121842543	.	+	.	ID=comp116758_c0_seq1.mrna1;geneID=comp116758_c0_seq1.path1;Name=comp116758_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=258;mismatches=5;indels=2;unknowns=0;Target=comp116758_c0_seq1 265 1 .;CDS_Target=comp116758_c0_seq1 79 2 .;locus=RLOC_00021152
Chr2	stalkie_big_nohaplotig	exon	121842281	121842543	97	+	.	Parent=comp116758_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	121842282	121842357	.	+	0	Parent=comp116758_c0_seq1.mrna1
Chr2	gffcl	locus	121869878	121870934	.	-	.	ID=RLOC_00021153;geneIDs=FBgn0039471.3.path1;transcripts=FBgn0039471.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121869878	121870934	.	-	.	ID=FBgn0039471.3.mrna1;geneID=FBgn0039471.3.path1;Name=FBgn0039471.3;Dir=sensecoverage=100.0;identity=99.7;matches=918;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021153
Chr2	stalkie_big_nohaplotig	exon	121869878	121870592	99	-	.	Parent=FBgn0039471.3.mrna1;Target=FBgn0039471.3 207 921 +
Chr2	stalkie_big_nohaplotig	exon	121870672	121870819	98	-	.	Parent=FBgn0039471.3.mrna1;Target=FBgn0039471.3 59 206 +
Chr2	stalkie_big_nohaplotig	exon	121870877	121870934	100	-	.	Parent=FBgn0039471.3.mrna1;Target=FBgn0039471.3 1 58 +
Chr2	stalkie_big_nohaplotig	CDS	121869878	121870592	.	-	1	Parent=FBgn0039471.3.mrna1;Target=FBgn0039471.3 207 921 +
Chr2	stalkie_big_nohaplotig	CDS	121870672	121870819	.	-	2	Parent=FBgn0039471.3.mrna1;Target=FBgn0039471.3 59 206 +
Chr2	stalkie_big_nohaplotig	CDS	121870877	121870934	.	-	0	Parent=FBgn0039471.3.mrna1;Target=FBgn0039471.3 1 58 +
Chr2	gffcl	locus	121872626	121873291	.	-	.	ID=RLOC_00021154;geneIDs=comp143192_c0_seq1.path1;transcripts=comp143192_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121872626	121873291	.	-	.	ID=comp143192_c0_seq1.mrna1;geneID=comp143192_c0_seq1.path1;Name=comp143192_c0_seq1;Dir=sensecoverage=96.9;identity=98.7;matches=532;mismatches=7;indels=0;unknowns=0;locus=RLOC_00021154
Chr2	stalkie_big_nohaplotig	exon	121872626	121872740	98	-	.	Parent=comp143192_c0_seq1.mrna1;Target=comp143192_c0_seq1 425 539 +
Chr2	stalkie_big_nohaplotig	exon	121872807	121872967	100	-	.	Parent=comp143192_c0_seq1.mrna1;Target=comp143192_c0_seq1 264 424 +
Chr2	stalkie_big_nohaplotig	exon	121873029	121873291	98	-	.	Parent=comp143192_c0_seq1.mrna1;Target=comp143192_c0_seq1 1 263 +
Chr2	stalkie_big_nohaplotig	CDS	121872860	121872967	.	-	0	Parent=comp143192_c0_seq1.mrna1;Target=comp143192_c0_seq1 264 371 +
Chr2	stalkie_big_nohaplotig	CDS	121873029	121873148	.	-	0	Parent=comp143192_c0_seq1.mrna1;Target=comp143192_c0_seq1 144 263 +
Chr2	gffcl	locus	121876427	121877477	.	-	.	ID=RLOC_00021155;geneIDs=comp155333_c0_seq1.path1;transcripts=comp155333_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121876427	121877477	.	-	.	ID=comp155333_c0_seq1.mrna1;geneID=comp155333_c0_seq1.path1;Name=comp155333_c0_seq1;Dir=antisensecoverage=96.6;identity=95.0;matches=897;mismatches=28;indels=19;unknowns=0;locus=RLOC_00021155
Chr2	stalkie_big_nohaplotig	exon	121876427	121877038	99	-	.	Parent=comp155333_c0_seq1.mrna1;Target=comp155333_c0_seq1 17 629 -
Chr2	stalkie_big_nohaplotig	exon	121877105	121877323	84	-	.	Parent=comp155333_c0_seq1.mrna1;Target=comp155333_c0_seq1 630 866 -
Chr2	stalkie_big_nohaplotig	exon	121877384	121877477	91	-	.	Parent=comp155333_c0_seq1.mrna1;Target=comp155333_c0_seq1 867 960 -
Chr2	stalkie_big_nohaplotig	CDS	121876580	121877038	.	-	0	Parent=comp155333_c0_seq1.mrna1;Target=comp155333_c0_seq1 171 629 .
Chr2	stalkie_big_nohaplotig	CDS	121877105	121877221	.	-	0	Parent=comp155333_c0_seq1.mrna1;Target=comp155333_c0_seq1 630 764 .
Chr2	gffcl	locus	121879659	121880752	.	+	.	ID=RLOC_00021156;geneIDs=comp770638_c0_seq1.path1;transcripts=comp770638_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121879659	121880752	.	+	.	ID=comp770638_c0_seq1.mrna1;geneID=comp770638_c0_seq1.path1;Name=comp770638_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=1094;mismatches=0;indels=0;unknowns=0;Target=comp770638_c0_seq1 1095 2 .;CDS_Target=comp770638_c0_seq1 784 623 .;locus=RLOC_00021156
Chr2	stalkie_big_nohaplotig	exon	121879659	121880752	100	+	.	Parent=comp770638_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	121880280	121880441	.	+	0	Parent=comp770638_c0_seq1.mrna1
Chr2	gffcl	locus	121924447	121946850	.	-	.	ID=RLOC_00021157;geneIDs=FBgn0002941.1.path1,comp152390_c1_seq1.path2;transcripts=FBgn0002941.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121924447	121946849	.	-	.	ID=FBgn0002941.1.mrna1;geneID=FBgn0002941.1.path1;Name=FBgn0002941.1;Dir=sensecoverage=69.2;identity=99.8;matches=959;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021157
Chr2	stalkie_big_nohaplotig	exon	121924447	121924480	94	-	.	Parent=FBgn0002941.1.mrna1;Target=FBgn0002941.1 928 961 +
Chr2	stalkie_big_nohaplotig	exon	121925289	121925575	100	-	.	Parent=FBgn0002941.1.mrna1;Target=FBgn0002941.1 641 927 +
Chr2	stalkie_big_nohaplotig	exon	121942143	121942407	100	-	.	Parent=FBgn0002941.1.mrna1;Target=FBgn0002941.1 376 640 +
Chr2	stalkie_big_nohaplotig	exon	121946475	121946849	100	-	.	Parent=FBgn0002941.1.mrna1;Target=FBgn0002941.1 1 375 +
Chr2	stalkie_big_nohaplotig	CDS	121924448	121924480	.	-	0	Parent=FBgn0002941.1.mrna1;Target=FBgn0002941.1 928 960 +
Chr2	stalkie_big_nohaplotig	CDS	121925289	121925575	.	-	2	Parent=FBgn0002941.1.mrna1;Target=FBgn0002941.1 641 927 +
Chr2	stalkie_big_nohaplotig	CDS	121942143	121942407	.	-	0	Parent=FBgn0002941.1.mrna1;Target=FBgn0002941.1 376 640 +
Chr2	stalkie_big_nohaplotig	CDS	121946475	121946849	.	-	0	Parent=FBgn0002941.1.mrna1;Target=FBgn0002941.1 1 375 +
Chr2	gffcl	locus	121946883	121947422	.	-	.	ID=RLOC_00021158;geneIDs=comp906950_c0_seq1.path1;transcripts=comp906950_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	121946883	121947422	.	-	.	ID=comp906950_c0_seq1.mrna1;geneID=comp906950_c0_seq1.path1;Name=comp906950_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=538;mismatches=2;indels=0;unknowns=0;Target=comp906950_c0_seq1 540 1 .;locus=RLOC_00021158
Chr2	stalkie_big_nohaplotig	exon	121946883	121947422	99	-	.	Parent=comp906950_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	121946883	121947422	.	-	0	Parent=comp906950_c0_seq1.mrna1
Chr2	gffcl	locus	121992187	121992513	.	-	.	ID=RLOC_00021159;geneIDs=FBgn0010612.2.path2;transcripts=FBgn0010612.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	121992187	121992513	.	-	.	ID=FBgn0010612.2.mrna2;geneID=FBgn0010612.2.path2;Name=FBgn0010612.2;Dir=indeterminatecoverage=100.0;identity=98.8;matches=323;mismatches=4;indels=0;unknowns=0;Target=FBgn0010612.2 327 1 .;locus=RLOC_00021159
Chr2	stalkie_big_nohaplotig	exon	121992187	121992513	98	-	.	Parent=FBgn0010612.2.mrna2
Chr2	stalkie_big_nohaplotig	CDS	121992187	121992513	.	-	0	Parent=FBgn0010612.2.mrna2
Chr2	gffcl	locus	122074558	122080604	.	-	.	ID=RLOC_00021160;geneIDs=FBgn0038515.1.path1;transcripts=FBgn0038515.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122074558	122080604	.	-	.	ID=FBgn0038515.1.mrna1;geneID=FBgn0038515.1.path1;Name=FBgn0038515.1;Dir=sensecoverage=100.0;identity=99.8;matches=910;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021160
Chr2	stalkie_big_nohaplotig	exon	122074558	122075001	100	-	.	Parent=FBgn0038515.1.mrna1;Target=FBgn0038515.1 469 912 +
Chr2	stalkie_big_nohaplotig	exon	122078337	122078407	100	-	.	Parent=FBgn0038515.1.mrna1;Target=FBgn0038515.1 398 468 +
Chr2	stalkie_big_nohaplotig	exon	122078481	122078814	99	-	.	Parent=FBgn0038515.1.mrna1;Target=FBgn0038515.1 64 397 +
Chr2	stalkie_big_nohaplotig	exon	122080542	122080604	100	-	.	Parent=FBgn0038515.1.mrna1;Target=FBgn0038515.1 1 63 +
Chr2	stalkie_big_nohaplotig	CDS	122074558	122075001	.	-	0	Parent=FBgn0038515.1.mrna1;Target=FBgn0038515.1 469 912 +
Chr2	stalkie_big_nohaplotig	CDS	122078337	122078407	.	-	2	Parent=FBgn0038515.1.mrna1;Target=FBgn0038515.1 398 468 +
Chr2	stalkie_big_nohaplotig	CDS	122078481	122078814	.	-	0	Parent=FBgn0038515.1.mrna1;Target=FBgn0038515.1 64 397 +
Chr2	stalkie_big_nohaplotig	CDS	122080542	122080604	.	-	0	Parent=FBgn0038515.1.mrna1;Target=FBgn0038515.1 1 63 +
Chr2	gffcl	locus	122083023	122085498	.	.	.	ID=RLOC_00021161;geneIDs=FBgn0038516.1.path1,comp155555_c0_seq1.path1;transcripts=FBgn0038516.1.mrna1,comp155555_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122083023	122085498	.	+	.	ID=FBgn0038516.1.mrna1;geneID=FBgn0038516.1.path1;Name=FBgn0038516.1;Dir=sensecoverage=100.0;identity=99.5;matches=833;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021161
Chr2	stalkie_big_nohaplotig	exon	122083023	122083125	100	+	.	Parent=FBgn0038516.1.mrna1;Target=FBgn0038516.1 1 103 +
Chr2	stalkie_big_nohaplotig	exon	122083185	122083255	100	+	.	Parent=FBgn0038516.1.mrna1;Target=FBgn0038516.1 104 174 +
Chr2	stalkie_big_nohaplotig	exon	122083314	122083490	98	+	.	Parent=FBgn0038516.1.mrna1;Target=FBgn0038516.1 175 351 +
Chr2	stalkie_big_nohaplotig	exon	122084947	122085364	99	+	.	Parent=FBgn0038516.1.mrna1;Target=FBgn0038516.1 352 769 +
Chr2	stalkie_big_nohaplotig	exon	122085431	122085498	100	+	.	Parent=FBgn0038516.1.mrna1;Target=FBgn0038516.1 770 837 +
Chr2	stalkie_big_nohaplotig	CDS	122083023	122083125	.	+	0	Parent=FBgn0038516.1.mrna1;Target=FBgn0038516.1 1 103 +
Chr2	stalkie_big_nohaplotig	CDS	122083185	122083255	.	+	2	Parent=FBgn0038516.1.mrna1;Target=FBgn0038516.1 104 174 +
Chr2	stalkie_big_nohaplotig	CDS	122083314	122083490	.	+	0	Parent=FBgn0038516.1.mrna1;Target=FBgn0038516.1 175 351 +
Chr2	stalkie_big_nohaplotig	CDS	122084947	122085364	.	+	0	Parent=FBgn0038516.1.mrna1;Target=FBgn0038516.1 352 769 +
Chr2	stalkie_big_nohaplotig	CDS	122085431	122085498	.	+	2	Parent=FBgn0038516.1.mrna1;Target=FBgn0038516.1 770 837 +
Chr2	stalkie_big_nohaplotig	mRNA	122083591	122084966	.	-	.	ID=comp155555_c0_seq1.mrna1;geneID=comp155555_c0_seq1.path1;Name=comp155555_c0_seq1;Dir=indeterminatecoverage=98.6;identity=98.4;matches=1363;mismatches=12;indels=10;unknowns=0;Target=comp155555_c0_seq1 1384 1 .;CDS_Target=comp155555_c0_seq1 1011 979 .;locus=RLOC_00021161
Chr2	stalkie_big_nohaplotig	exon	122083591	122084966	98	-	.	Parent=comp155555_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	122083965	122083988	.	-	0	Parent=comp155555_c0_seq1.mrna1
Chr2	gffcl	locus	122086174	122089059	.	-	.	ID=RLOC_00021162;geneIDs=FBgn0010926.1.path1;transcripts=FBgn0010926.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122086174	122089059	.	-	.	ID=FBgn0010926.1.mrna1;geneID=FBgn0010926.1.path1;Name=FBgn0010926.1;Dir=sensecoverage=100.0;identity=100.0;matches=2711;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021162
Chr2	stalkie_big_nohaplotig	exon	122086174	122086276	100	-	.	Parent=FBgn0010926.1.mrna1;Target=FBgn0010926.1 2610 2712 +
Chr2	stalkie_big_nohaplotig	exon	122086337	122087855	100	-	.	Parent=FBgn0010926.1.mrna1;Target=FBgn0010926.1 1091 2609 +
Chr2	stalkie_big_nohaplotig	exon	122087911	122088402	100	-	.	Parent=FBgn0010926.1.mrna1;Target=FBgn0010926.1 599 1090 +
Chr2	stalkie_big_nohaplotig	exon	122088462	122089059	99	-	.	Parent=FBgn0010926.1.mrna1;Target=FBgn0010926.1 1 598 +
Chr2	stalkie_big_nohaplotig	CDS	122086174	122086276	.	-	1	Parent=FBgn0010926.1.mrna1;Target=FBgn0010926.1 2610 2712 +
Chr2	stalkie_big_nohaplotig	CDS	122086337	122087855	.	-	2	Parent=FBgn0010926.1.mrna1;Target=FBgn0010926.1 1091 2609 +
Chr2	stalkie_big_nohaplotig	CDS	122087911	122088402	.	-	2	Parent=FBgn0010926.1.mrna1;Target=FBgn0010926.1 599 1090 +
Chr2	stalkie_big_nohaplotig	CDS	122088462	122089059	.	-	0	Parent=FBgn0010926.1.mrna1;Target=FBgn0010926.1 1 598 +
Chr2	gffcl	locus	122090463	122095971	.	+	.	ID=RLOC_00021163;geneIDs=FBgn0025571.1.path1;transcripts=FBgn0025571.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122090463	122095971	.	+	.	ID=FBgn0025571.1.mrna1;geneID=FBgn0025571.1.path1;Name=FBgn0025571.1;Dir=sensecoverage=100.0;identity=99.2;matches=2472;mismatches=0;indels=21;unknowns=0;locus=RLOC_00021163
Chr2	stalkie_big_nohaplotig	exon	122090463	122090659	100	+	.	Parent=FBgn0025571.1.mrna1;Target=FBgn0025571.1 1 197 +
Chr2	stalkie_big_nohaplotig	exon	122090722	122091422	99	+	.	Parent=FBgn0025571.1.mrna1;Target=FBgn0025571.1 198 904 +
Chr2	stalkie_big_nohaplotig	exon	122091488	122091619	100	+	.	Parent=FBgn0025571.1.mrna1;Target=FBgn0025571.1 905 1036 +
Chr2	stalkie_big_nohaplotig	exon	122092635	122092710	100	+	.	Parent=FBgn0025571.1.mrna1;Target=FBgn0025571.1 1037 1112 +
Chr2	stalkie_big_nohaplotig	exon	122094472	122094624	100	+	.	Parent=FBgn0025571.1.mrna1;Target=FBgn0025571.1 1113 1265 +
Chr2	stalkie_big_nohaplotig	exon	122094688	122095700	98	+	.	Parent=FBgn0025571.1.mrna1;Target=FBgn0025571.1 1266 2263 +
Chr2	stalkie_big_nohaplotig	exon	122095757	122095971	100	+	.	Parent=FBgn0025571.1.mrna1;Target=FBgn0025571.1 2264 2478 +
Chr2	stalkie_big_nohaplotig	CDS	122090463	122090659	.	+	0	Parent=FBgn0025571.1.mrna1;Target=FBgn0025571.1 1 197 +
Chr2	stalkie_big_nohaplotig	CDS	122090722	122091422	.	+	1	Parent=FBgn0025571.1.mrna1;Target=FBgn0025571.1 198 904 +
Chr2	stalkie_big_nohaplotig	CDS	122091488	122091619	.	+	2	Parent=FBgn0025571.1.mrna1;Target=FBgn0025571.1 905 1036 +
Chr2	stalkie_big_nohaplotig	CDS	122092635	122092710	.	+	2	Parent=FBgn0025571.1.mrna1;Target=FBgn0025571.1 1037 1112 +
Chr2	stalkie_big_nohaplotig	CDS	122094472	122094624	.	+	1	Parent=FBgn0025571.1.mrna1;Target=FBgn0025571.1 1113 1265 +
Chr2	stalkie_big_nohaplotig	CDS	122094688	122095700	.	+	1	Parent=FBgn0025571.1.mrna1;Target=FBgn0025571.1 1266 2263 +
Chr2	stalkie_big_nohaplotig	CDS	122095757	122095971	.	+	2	Parent=FBgn0025571.1.mrna1;Target=FBgn0025571.1 2264 2478 +
Chr2	gffcl	locus	122097091	122098060	.	-	.	ID=RLOC_00021164;geneIDs=FBgn0038519.1.path1;transcripts=FBgn0038519.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122097091	122098060	.	-	.	ID=FBgn0038519.1.mrna1;geneID=FBgn0038519.1.path1;Name=FBgn0038519.1;Dir=sensecoverage=100.0;identity=100.0;matches=726;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021164
Chr2	stalkie_big_nohaplotig	exon	122097091	122097550	100	-	.	Parent=FBgn0038519.1.mrna1;Target=FBgn0038519.1 267 726 +
Chr2	stalkie_big_nohaplotig	exon	122097626	122097767	100	-	.	Parent=FBgn0038519.1.mrna1;Target=FBgn0038519.1 125 266 +
Chr2	stalkie_big_nohaplotig	exon	122097850	122097913	100	-	.	Parent=FBgn0038519.1.mrna1;Target=FBgn0038519.1 61 124 +
Chr2	stalkie_big_nohaplotig	exon	122098001	122098060	100	-	.	Parent=FBgn0038519.1.mrna1;Target=FBgn0038519.1 1 60 +
Chr2	stalkie_big_nohaplotig	CDS	122097091	122097550	.	-	1	Parent=FBgn0038519.1.mrna1;Target=FBgn0038519.1 267 726 +
Chr2	stalkie_big_nohaplotig	CDS	122097626	122097767	.	-	2	Parent=FBgn0038519.1.mrna1;Target=FBgn0038519.1 125 266 +
Chr2	stalkie_big_nohaplotig	CDS	122097850	122097913	.	-	0	Parent=FBgn0038519.1.mrna1;Target=FBgn0038519.1 61 124 +
Chr2	stalkie_big_nohaplotig	CDS	122098001	122098060	.	-	0	Parent=FBgn0038519.1.mrna1;Target=FBgn0038519.1 1 60 +
Chr2	stalkie_big_nohaplotig	mRNA	122103871	122137023	.	+	.	ID=ORF3239.mrna1;geneID=ORF3239.path1;Name=ORF3239;Dir=sensecoverage=100.0;identity=98.5;matches=742;mismatches=11;indels=0;unknowns=0;locus=RLOC_00021165
Chr2	stalkie_big_nohaplotig	exon	122103871	122103903	96	+	.	Parent=ORF3239.mrna1;Target=ORF3239 1 33 +
Chr2	stalkie_big_nohaplotig	exon	122109109	122109111	100	+	.	Parent=ORF3239.mrna1;Target=ORF3239 34 36 +
Chr2	stalkie_big_nohaplotig	exon	122136307	122137023	98	+	.	Parent=ORF3239.mrna1;Target=ORF3239 37 753 +
Chr2	stalkie_big_nohaplotig	CDS	122103871	122103903	.	+	0	Parent=ORF3239.mrna1;Target=ORF3239 1 33 +
Chr2	stalkie_big_nohaplotig	CDS	122109109	122109111	.	+	0	Parent=ORF3239.mrna1;Target=ORF3239 34 36 +
Chr2	stalkie_big_nohaplotig	CDS	122136307	122137023	.	+	0	Parent=ORF3239.mrna1;Target=ORF3239 37 753 +
Chr2	gffcl	locus	122118852	122119727	.	+	.	ID=RLOC_00021166;geneIDs=FBgn0038122.1.path1;transcripts=FBgn0038122.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122118852	122119727	.	+	.	ID=FBgn0038122.1.mrna1;geneID=FBgn0038122.1.path1;Name=FBgn0038122.1;Dir=sensecoverage=100.0;identity=100.0;matches=816;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021166
Chr2	stalkie_big_nohaplotig	exon	122118852	122119274	100	+	.	Parent=FBgn0038122.1.mrna1;Target=FBgn0038122.1 1 423 +
Chr2	stalkie_big_nohaplotig	exon	122119335	122119727	100	+	.	Parent=FBgn0038122.1.mrna1;Target=FBgn0038122.1 424 816 +
Chr2	stalkie_big_nohaplotig	CDS	122118852	122119274	.	+	0	Parent=FBgn0038122.1.mrna1;Target=FBgn0038122.1 1 423 +
Chr2	stalkie_big_nohaplotig	CDS	122119335	122119727	.	+	0	Parent=FBgn0038122.1.mrna1;Target=FBgn0038122.1 424 816 +
Chr2	gffcl	locus	122301146	123973504	.	-	.	ID=RLOC_00021167;geneIDs=FBgn0038829.path1,FBgn0020386.1.path1,FBgn0263118.1.path1;transcripts=FBgn0020386.1.mrna1,FBgn0263118.1.mrna1,FBgn0038829.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122301146	123973504	.	-	.	ID=FBgn0020386.1.mrna1;geneID=FBgn0020386.1.path1;Name=FBgn0020386.1;Dir=indeterminatecoverage=21.1;identity=100.0;matches=523;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021167
Chr2	stalkie_big_nohaplotig	exon	122301146	122301150	100	-	.	Parent=FBgn0020386.1.mrna1;Target=FBgn0020386.1 568 564 .
Chr2	stalkie_big_nohaplotig	exon	122301804	122301812	100	-	.	Parent=FBgn0020386.1.mrna1;Target=FBgn0020386.1 563 555 .
Chr2	stalkie_big_nohaplotig	exon	122307806	122307814	100	-	.	Parent=FBgn0020386.1.mrna1;Target=FBgn0020386.1 549 541 .
Chr2	stalkie_big_nohaplotig	exon	122323850	122323853	100	-	.	Parent=FBgn0020386.1.mrna1;Target=FBgn0020386.1 540 537 .
Chr2	stalkie_big_nohaplotig	exon	122327301	122327305	100	-	.	Parent=FBgn0020386.1.mrna1;Target=FBgn0020386.1 536 532 .
Chr2	stalkie_big_nohaplotig	exon	122334890	122334899	100	-	.	Parent=FBgn0020386.1.mrna1;Target=FBgn0020386.1 531 522 .
Chr2	stalkie_big_nohaplotig	exon	122345091	122345095	100	-	.	Parent=FBgn0020386.1.mrna1;Target=FBgn0020386.1 480 476 .
Chr2	stalkie_big_nohaplotig	exon	122348520	122348526	100	-	.	Parent=FBgn0020386.1.mrna1;Target=FBgn0020386.1 475 469 .
Chr2	stalkie_big_nohaplotig	exon	123970983	123971167	100	-	.	Parent=FBgn0020386.1.mrna1;Target=FBgn0020386.1 468 284 .
Chr2	stalkie_big_nohaplotig	exon	123971439	123971587	100	-	.	Parent=FBgn0020386.1.mrna1;Target=FBgn0020386.1 283 135 .
Chr2	stalkie_big_nohaplotig	exon	123973371	123973504	100	-	.	Parent=FBgn0020386.1.mrna1;Target=FBgn0020386.1 134 1 .
Chr2	stalkie_big_nohaplotig	mRNA	122347476	122348537	.	-	.	ID=FBgn0263118.1.mrna1;geneID=FBgn0263118.1.path1;Name=FBgn0263118.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1062;mismatches=0;indels=0;unknowns=0;Target=FBgn0263118.1 1062 1 .;locus=RLOC_00021167
Chr2	stalkie_big_nohaplotig	exon	122347476	122348537	100	-	.	Parent=FBgn0263118.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	122347476	122348537	.	-	0	Parent=FBgn0263118.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123969806	123973504	.	-	.	ID=FBgn0038829.mrna1;geneID=FBgn0038829.path1;Name=FBgn0038829;Dir=sensecoverage=100.0;identity=100.0;matches=471;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021167
Chr2	stalkie_big_nohaplotig	exon	123969806	123969993	100	-	.	Parent=FBgn0038829.mrna1;Target=FBgn0038829 284 471 +
Chr2	stalkie_big_nohaplotig	exon	123971439	123971587	100	-	.	Parent=FBgn0038829.mrna1;Target=FBgn0038829 135 283 +
Chr2	stalkie_big_nohaplotig	exon	123973371	123973504	100	-	.	Parent=FBgn0038829.mrna1;Target=FBgn0038829 1 134 +
Chr2	stalkie_big_nohaplotig	CDS	123969806	123969993	.	-	2	Parent=FBgn0038829.mrna1;Target=FBgn0038829 284 471 +
Chr2	stalkie_big_nohaplotig	CDS	123971439	123971587	.	-	1	Parent=FBgn0038829.mrna1;Target=FBgn0038829 135 283 +
Chr2	stalkie_big_nohaplotig	CDS	123973371	123973504	.	-	0	Parent=FBgn0038829.mrna1;Target=FBgn0038829 1 134 +
Chr2	gffcl	locus	122306934	122392394	.	+	.	ID=RLOC_00021168;geneIDs=FBgn0261046.1.path1;transcripts=FBgn0261046.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122306934	122392394	.	+	.	ID=FBgn0261046.1.mrna1;geneID=FBgn0261046.1.path1;Name=FBgn0261046.1;Dir=sensecoverage=100.0;identity=100.0;matches=6013;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021168
Chr2	stalkie_big_nohaplotig	exon	122306934	122307000	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 1 67 +
Chr2	stalkie_big_nohaplotig	exon	122307670	122307913	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 68 311 +
Chr2	stalkie_big_nohaplotig	exon	122317712	122317854	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 312 454 +
Chr2	stalkie_big_nohaplotig	exon	122327913	122328074	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 455 616 +
Chr2	stalkie_big_nohaplotig	exon	122331225	122331374	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 617 766 +
Chr2	stalkie_big_nohaplotig	exon	122331476	122331596	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 767 887 +
Chr2	stalkie_big_nohaplotig	exon	122335454	122335571	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 888 1005 +
Chr2	stalkie_big_nohaplotig	exon	122338776	122338999	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 1006 1229 +
Chr2	stalkie_big_nohaplotig	exon	122341291	122341418	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 1230 1357 +
Chr2	stalkie_big_nohaplotig	exon	122341549	122341649	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 1358 1458 +
Chr2	stalkie_big_nohaplotig	exon	122341786	122341990	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 1459 1663 +
Chr2	stalkie_big_nohaplotig	exon	122367083	122367214	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 1664 1795 +
Chr2	stalkie_big_nohaplotig	exon	122367490	122367639	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 1796 1945 +
Chr2	stalkie_big_nohaplotig	exon	122368783	122368928	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 1946 2091 +
Chr2	stalkie_big_nohaplotig	exon	122369148	122369283	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 2092 2227 +
Chr2	stalkie_big_nohaplotig	exon	122369713	122369832	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 2228 2347 +
Chr2	stalkie_big_nohaplotig	exon	122370237	122370389	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 2348 2500 +
Chr2	stalkie_big_nohaplotig	exon	122370524	122371046	99	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 2501 3023 +
Chr2	stalkie_big_nohaplotig	exon	122371198	122371408	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 3024 3234 +
Chr2	stalkie_big_nohaplotig	exon	122378346	122378601	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 3235 3490 +
Chr2	stalkie_big_nohaplotig	exon	122378839	122378982	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 3491 3634 +
Chr2	stalkie_big_nohaplotig	exon	122379718	122380026	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 3635 3943 +
Chr2	stalkie_big_nohaplotig	exon	122380723	122380878	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 3944 4099 +
Chr2	stalkie_big_nohaplotig	exon	122383785	122383964	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 4100 4279 +
Chr2	stalkie_big_nohaplotig	exon	122384388	122384762	99	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 4280 4654 +
Chr2	stalkie_big_nohaplotig	exon	122385180	122385305	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 4655 4780 +
Chr2	stalkie_big_nohaplotig	exon	122389223	122389538	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 4781 5096 +
Chr2	stalkie_big_nohaplotig	exon	122391198	122391361	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 5097 5260 +
Chr2	stalkie_big_nohaplotig	exon	122391507	122391755	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 5261 5509 +
Chr2	stalkie_big_nohaplotig	exon	122391811	122392062	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 5510 5761 +
Chr2	stalkie_big_nohaplotig	exon	122392141	122392394	100	+	.	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 5762 6015 +
Chr2	stalkie_big_nohaplotig	CDS	122306934	122307000	.	+	0	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 1 67 +
Chr2	stalkie_big_nohaplotig	CDS	122307670	122307913	.	+	2	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 68 311 +
Chr2	stalkie_big_nohaplotig	CDS	122317712	122317854	.	+	1	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 312 454 +
Chr2	stalkie_big_nohaplotig	CDS	122327913	122328074	.	+	2	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 455 616 +
Chr2	stalkie_big_nohaplotig	CDS	122331225	122331374	.	+	2	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 617 766 +
Chr2	stalkie_big_nohaplotig	CDS	122331476	122331596	.	+	2	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 767 887 +
Chr2	stalkie_big_nohaplotig	CDS	122335454	122335571	.	+	1	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 888 1005 +
Chr2	stalkie_big_nohaplotig	CDS	122338776	122338999	.	+	0	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 1006 1229 +
Chr2	stalkie_big_nohaplotig	CDS	122341291	122341418	.	+	1	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 1230 1357 +
Chr2	stalkie_big_nohaplotig	CDS	122341549	122341649	.	+	2	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 1358 1458 +
Chr2	stalkie_big_nohaplotig	CDS	122341786	122341990	.	+	0	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 1459 1663 +
Chr2	stalkie_big_nohaplotig	CDS	122367083	122367214	.	+	2	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 1664 1795 +
Chr2	stalkie_big_nohaplotig	CDS	122367490	122367639	.	+	2	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 1796 1945 +
Chr2	stalkie_big_nohaplotig	CDS	122368783	122368928	.	+	2	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 1946 2091 +
Chr2	stalkie_big_nohaplotig	CDS	122369148	122369283	.	+	0	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 2092 2227 +
Chr2	stalkie_big_nohaplotig	CDS	122369713	122369832	.	+	2	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 2228 2347 +
Chr2	stalkie_big_nohaplotig	CDS	122370237	122370389	.	+	2	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 2348 2500 +
Chr2	stalkie_big_nohaplotig	CDS	122370524	122371046	.	+	2	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 2501 3023 +
Chr2	stalkie_big_nohaplotig	CDS	122371198	122371408	.	+	1	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 3024 3234 +
Chr2	stalkie_big_nohaplotig	CDS	122378346	122378601	.	+	0	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 3235 3490 +
Chr2	stalkie_big_nohaplotig	CDS	122378839	122378982	.	+	2	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 3491 3634 +
Chr2	stalkie_big_nohaplotig	CDS	122379718	122380026	.	+	2	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 3635 3943 +
Chr2	stalkie_big_nohaplotig	CDS	122380723	122380878	.	+	2	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 3944 4099 +
Chr2	stalkie_big_nohaplotig	CDS	122383785	122383964	.	+	2	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 4100 4279 +
Chr2	stalkie_big_nohaplotig	CDS	122384388	122384762	.	+	2	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 4280 4654 +
Chr2	stalkie_big_nohaplotig	CDS	122385180	122385305	.	+	2	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 4655 4780 +
Chr2	stalkie_big_nohaplotig	CDS	122389223	122389538	.	+	2	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 4781 5096 +
Chr2	stalkie_big_nohaplotig	CDS	122391198	122391361	.	+	1	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 5097 5260 +
Chr2	stalkie_big_nohaplotig	CDS	122391507	122391755	.	+	2	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 5261 5509 +
Chr2	stalkie_big_nohaplotig	CDS	122391811	122392062	.	+	2	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 5510 5761 +
Chr2	stalkie_big_nohaplotig	CDS	122392141	122392394	.	+	2	Parent=FBgn0261046.1.mrna1;Target=FBgn0261046.1 5762 6015 +
Chr2	gffcl	locus	122313741	122314067	.	+	.	ID=RLOC_00021169;geneIDs=FBgn0010612.2.path1;transcripts=FBgn0010612.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122313741	122314067	.	+	.	ID=FBgn0010612.2.mrna1;geneID=FBgn0010612.2.path1;Name=FBgn0010612.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=327;mismatches=0;indels=0;unknowns=0;Target=FBgn0010612.2 327 1 .;locus=RLOC_00021169
Chr2	stalkie_big_nohaplotig	exon	122313741	122314067	100	+	.	Parent=FBgn0010612.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	122313741	122314067	.	+	0	Parent=FBgn0010612.2.mrna1
Chr2	gffcl	locus	122397145	122398016	.	-	.	ID=RLOC_00021170;geneIDs=comp135919_c0_seq1.path1;transcripts=comp135919_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122397145	122398016	.	-	.	ID=comp135919_c0_seq1.mrna1;geneID=comp135919_c0_seq1.path1;Name=comp135919_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=872;mismatches=0;indels=0;unknowns=0;Target=comp135919_c0_seq1 872 1 .;CDS_Target=comp135919_c0_seq1 828 601 .;locus=RLOC_00021170
Chr2	stalkie_big_nohaplotig	exon	122397145	122398016	100	-	.	Parent=comp135919_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	122397189	122397416	.	-	0	Parent=comp135919_c0_seq1.mrna1
Chr2	gffcl	locus	122404669	122405433	.	-	.	ID=RLOC_00021171;geneIDs=comp135375_c0_seq1.path1;transcripts=comp135375_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122404669	122405433	.	-	.	ID=comp135375_c0_seq1.mrna1;geneID=comp135375_c0_seq1.path1;Name=comp135375_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=764;mismatches=1;indels=0;unknowns=0;Target=comp135375_c0_seq1 765 1 .;CDS_Target=comp135375_c0_seq1 253 110 .;locus=RLOC_00021171
Chr2	stalkie_big_nohaplotig	exon	122404669	122405433	99	-	.	Parent=comp135375_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	122405181	122405324	.	-	0	Parent=comp135375_c0_seq1.mrna1
Chr2	gffcl	locus	122429736	122430347	.	+	.	ID=RLOC_00021172;geneIDs=comp147335_c0_seq1.path1;transcripts=comp147335_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122429736	122430347	.	+	.	ID=comp147335_c0_seq1.mrna1;geneID=comp147335_c0_seq1.path1;Name=comp147335_c0_seq1;Dir=sensecoverage=98.7;identity=100.0;matches=513;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021172
Chr2	stalkie_big_nohaplotig	exon	122429736	122429945	100	+	.	Parent=comp147335_c0_seq1.mrna1;Target=comp147335_c0_seq1 1 210 +
Chr2	stalkie_big_nohaplotig	exon	122430045	122430347	100	+	.	Parent=comp147335_c0_seq1.mrna1;Target=comp147335_c0_seq1 211 513 +
Chr2	stalkie_big_nohaplotig	CDS	122429936	122429945	.	+	0	Parent=comp147335_c0_seq1.mrna1;Target=comp147335_c0_seq1 201 210 +
Chr2	stalkie_big_nohaplotig	CDS	122430045	122430223	.	+	2	Parent=comp147335_c0_seq1.mrna1;Target=comp147335_c0_seq1 211 389 +
Chr2	gffcl	locus	122431487	124129221	.	+	.	ID=RLOC_00021173;geneIDs=FBgn0002937.1.path1,FBgn0032292.3.path1;transcripts=FBgn0032292.3.mrna1,FBgn0002937.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122431487	124129219	.	+	.	ID=FBgn0032292.3.mrna1;geneID=FBgn0032292.3.path1;Name=FBgn0032292.3;Dir=sensecoverage=80.2;identity=99.1;matches=687;mismatches=6;indels=0;unknowns=0;locus=RLOC_00021173
Chr2	stalkie_big_nohaplotig	exon	122431487	122431577	100	+	.	Parent=FBgn0032292.3.mrna1;Target=FBgn0032292.3 1 91 +
Chr2	stalkie_big_nohaplotig	exon	122432808	122433006	99	+	.	Parent=FBgn0032292.3.mrna1;Target=FBgn0032292.3 92 290 +
Chr2	stalkie_big_nohaplotig	exon	122433060	122433433	98	+	.	Parent=FBgn0032292.3.mrna1;Target=FBgn0032292.3 291 664 +
Chr2	stalkie_big_nohaplotig	exon	124107672	124107675	75	+	.	Parent=FBgn0032292.3.mrna1;Target=FBgn0032292.3 665 668 +
Chr2	stalkie_big_nohaplotig	exon	124119739	124119741	100	+	.	Parent=FBgn0032292.3.mrna1;Target=FBgn0032292.3 669 671 +
Chr2	stalkie_big_nohaplotig	exon	124127733	124127739	100	+	.	Parent=FBgn0032292.3.mrna1;Target=FBgn0032292.3 672 678 +
Chr2	stalkie_big_nohaplotig	exon	124129200	124129207	100	+	.	Parent=FBgn0032292.3.mrna1;Target=FBgn0032292.3 679 686 +
Chr2	stalkie_big_nohaplotig	exon	124129213	124129219	100	+	.	Parent=FBgn0032292.3.mrna1;Target=FBgn0032292.3 721 727 +
Chr2	stalkie_big_nohaplotig	CDS	122431487	122431577	.	+	0	Parent=FBgn0032292.3.mrna1;Target=FBgn0032292.3 1 91 +
Chr2	stalkie_big_nohaplotig	CDS	122432808	122433006	.	+	2	Parent=FBgn0032292.3.mrna1;Target=FBgn0032292.3 92 290 +
Chr2	stalkie_big_nohaplotig	CDS	122433060	122433433	.	+	1	Parent=FBgn0032292.3.mrna1;Target=FBgn0032292.3 291 664 +
Chr2	stalkie_big_nohaplotig	CDS	124107672	124107675	.	+	2	Parent=FBgn0032292.3.mrna1;Target=FBgn0032292.3 665 668 +
Chr2	stalkie_big_nohaplotig	CDS	124119739	124119741	.	+	1	Parent=FBgn0032292.3.mrna1;Target=FBgn0032292.3 669 671 +
Chr2	stalkie_big_nohaplotig	CDS	124127733	124127739	.	+	1	Parent=FBgn0032292.3.mrna1;Target=FBgn0032292.3 672 678 +
Chr2	stalkie_big_nohaplotig	CDS	124129200	124129207	.	+	0	Parent=FBgn0032292.3.mrna1;Target=FBgn0032292.3 679 686 +
Chr2	stalkie_big_nohaplotig	CDS	124129213	124129218	.	+	1	Parent=FBgn0032292.3.mrna1;Target=FBgn0032292.3 721 726 +
Chr2	stalkie_big_nohaplotig	mRNA	124118794	124129221	.	+	.	ID=FBgn0002937.1.mrna1;geneID=FBgn0002937.1.path1;Name=FBgn0002937.1;Dir=sensecoverage=100.0;identity=100.0;matches=1911;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021173
Chr2	stalkie_big_nohaplotig	exon	124118794	124118865	100	+	.	Parent=FBgn0002937.1.mrna1;Target=FBgn0002937.1 1 72 +
Chr2	stalkie_big_nohaplotig	exon	124123051	124123451	100	+	.	Parent=FBgn0002937.1.mrna1;Target=FBgn0002937.1 73 473 +
Chr2	stalkie_big_nohaplotig	exon	124123534	124123641	100	+	.	Parent=FBgn0002937.1.mrna1;Target=FBgn0002937.1 474 581 +
Chr2	stalkie_big_nohaplotig	exon	124127695	124127948	100	+	.	Parent=FBgn0002937.1.mrna1;Target=FBgn0002937.1 582 835 +
Chr2	stalkie_big_nohaplotig	exon	124128014	124128754	100	+	.	Parent=FBgn0002937.1.mrna1;Target=FBgn0002937.1 836 1576 +
Chr2	stalkie_big_nohaplotig	exon	124128824	124128885	100	+	.	Parent=FBgn0002937.1.mrna1;Target=FBgn0002937.1 1577 1638 +
Chr2	stalkie_big_nohaplotig	exon	124128949	124129221	100	+	.	Parent=FBgn0002937.1.mrna1;Target=FBgn0002937.1 1639 1911 +
Chr2	stalkie_big_nohaplotig	CDS	124118794	124118865	.	+	0	Parent=FBgn0002937.1.mrna1;Target=FBgn0002937.1 1 72 +
Chr2	stalkie_big_nohaplotig	CDS	124123051	124123451	.	+	0	Parent=FBgn0002937.1.mrna1;Target=FBgn0002937.1 73 473 +
Chr2	stalkie_big_nohaplotig	CDS	124123534	124123641	.	+	1	Parent=FBgn0002937.1.mrna1;Target=FBgn0002937.1 474 581 +
Chr2	stalkie_big_nohaplotig	CDS	124127695	124127948	.	+	1	Parent=FBgn0002937.1.mrna1;Target=FBgn0002937.1 582 835 +
Chr2	stalkie_big_nohaplotig	CDS	124128014	124128754	.	+	2	Parent=FBgn0002937.1.mrna1;Target=FBgn0002937.1 836 1576 +
Chr2	stalkie_big_nohaplotig	CDS	124128824	124128885	.	+	2	Parent=FBgn0002937.1.mrna1;Target=FBgn0002937.1 1577 1638 +
Chr2	stalkie_big_nohaplotig	CDS	124128949	124129221	.	+	0	Parent=FBgn0002937.1.mrna1;Target=FBgn0002937.1 1639 1911 +
Chr2	gffcl	locus	122446562	122447572	.	+	.	ID=RLOC_00021174;geneIDs=comp148866_c0_seq1.path1;transcripts=comp148866_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122446562	122447572	.	+	.	ID=comp148866_c0_seq1.mrna1;geneID=comp148866_c0_seq1.path1;Name=comp148866_c0_seq1;Dir=antisensecoverage=99.9;identity=99.8;matches=831;mismatches=1;indels=1;unknowns=0;locus=RLOC_00021174
Chr2	stalkie_big_nohaplotig	exon	122446562	122446704	99	+	.	Parent=comp148866_c0_seq1.mrna1;Target=comp148866_c0_seq1 692 834 -
Chr2	stalkie_big_nohaplotig	exon	122446814	122446978	100	+	.	Parent=comp148866_c0_seq1.mrna1;Target=comp148866_c0_seq1 527 691 -
Chr2	stalkie_big_nohaplotig	exon	122447049	122447572	99	+	.	Parent=comp148866_c0_seq1.mrna1;Target=comp148866_c0_seq1 2 526 -
Chr2	stalkie_big_nohaplotig	CDS	122446696	122446704	.	+	0	Parent=comp148866_c0_seq1.mrna1;Target=comp148866_c0_seq1 692 700 .
Chr2	stalkie_big_nohaplotig	CDS	122446814	122446978	.	+	0	Parent=comp148866_c0_seq1.mrna1;Target=comp148866_c0_seq1 527 691 .
Chr2	stalkie_big_nohaplotig	CDS	122447049	122447470	.	+	0	Parent=comp148866_c0_seq1.mrna1;Target=comp148866_c0_seq1 104 526 .
Chr2	gffcl	locus	122464808	122465726	.	-	.	ID=RLOC_00021175;geneIDs=comp151687_c0_seq1.path1;transcripts=comp151687_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122464808	122465726	.	-	.	ID=comp151687_c0_seq1.mrna1;geneID=comp151687_c0_seq1.path1;Name=comp151687_c0_seq1;Dir=antisensecoverage=97.5;identity=99.6;matches=789;mismatches=2;indels=1;unknowns=0;Target=comp151687_c0_seq1 652 792 .;locus=RLOC_00021175
Chr2	stalkie_big_nohaplotig	exon	122464808	122465126	100	-	.	Parent=comp151687_c0_seq1.mrna1;Target=comp151687_c0_seq1 1 319 -
Chr2	stalkie_big_nohaplotig	exon	122465182	122465334	100	-	.	Parent=comp151687_c0_seq1.mrna1;Target=comp151687_c0_seq1 320 472 -
Chr2	stalkie_big_nohaplotig	exon	122465408	122465726	99	-	.	Parent=comp151687_c0_seq1.mrna1;Target=comp151687_c0_seq1 473 792 -
Chr2	stalkie_big_nohaplotig	CDS	122465587	122465726	.	-	0	Parent=comp151687_c0_seq1.mrna1
Chr2	gffcl	locus	122469878	122470567	.	+	.	ID=RLOC_00021176;geneIDs=comp135695_c0_seq1.path1;transcripts=comp135695_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122469878	122470567	.	+	.	ID=comp135695_c0_seq1.mrna1;geneID=comp135695_c0_seq1.path1;Name=comp135695_c0_seq1;Dir=antisensecoverage=99.3;identity=97.9;matches=595;mismatches=4;indels=9;unknowns=0;locus=RLOC_00021176
Chr2	stalkie_big_nohaplotig	exon	122469878	122470106	99	+	.	Parent=comp135695_c0_seq1.mrna1;Target=comp135695_c0_seq1 381 609 -
Chr2	stalkie_big_nohaplotig	exon	122470198	122470567	96	+	.	Parent=comp135695_c0_seq1.mrna1;Target=comp135695_c0_seq1 2 380 -
Chr2	stalkie_big_nohaplotig	CDS	122469917	122470106	.	+	0	Parent=comp135695_c0_seq1.mrna1;Target=comp135695_c0_seq1 381 570 .
Chr2	stalkie_big_nohaplotig	CDS	122470198	122470271	.	+	2	Parent=comp135695_c0_seq1.mrna1;Target=comp135695_c0_seq1 307 380 .
Chr2	gffcl	locus	122470837	122471592	.	+	.	ID=RLOC_00021177;geneIDs=comp586752_c0_seq1.path1;transcripts=comp586752_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122470837	122471592	.	+	.	ID=comp586752_c0_seq1.mrna1;geneID=comp586752_c0_seq1.path1;Name=comp586752_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.9;matches=712;mismatches=35;indels=11;unknowns=0;Target=comp586752_c0_seq1 749 1 .;CDS_Target=comp586752_c0_seq1 481 329 .;locus=RLOC_00021177
Chr2	stalkie_big_nohaplotig	exon	122470837	122471592	93	+	.	Parent=comp586752_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	122471164	122471324	.	+	0	Parent=comp586752_c0_seq1.mrna1
Chr2	gffcl	locus	122472845	122490059	.	-	.	ID=RLOC_00021178;geneIDs=comp148741_c0_seq1.path1;transcripts=comp148741_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122472845	122490059	.	-	.	ID=comp148741_c0_seq1.mrna1;geneID=comp148741_c0_seq1.path1;Name=comp148741_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=803;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021178
Chr2	stalkie_big_nohaplotig	exon	122472845	122473030	100	-	.	Parent=comp148741_c0_seq1.mrna1;Target=comp148741_c0_seq1 1 186 -
Chr2	stalkie_big_nohaplotig	exon	122473096	122473272	100	-	.	Parent=comp148741_c0_seq1.mrna1;Target=comp148741_c0_seq1 187 363 -
Chr2	stalkie_big_nohaplotig	exon	122473338	122473644	100	-	.	Parent=comp148741_c0_seq1.mrna1;Target=comp148741_c0_seq1 364 670 -
Chr2	stalkie_big_nohaplotig	exon	122489927	122490059	100	-	.	Parent=comp148741_c0_seq1.mrna1;Target=comp148741_c0_seq1 671 803 -
Chr2	stalkie_big_nohaplotig	CDS	122472996	122473030	.	-	2	Parent=comp148741_c0_seq1.mrna1;Target=comp148741_c0_seq1 152 186 .
Chr2	stalkie_big_nohaplotig	CDS	122473096	122473272	.	-	2	Parent=comp148741_c0_seq1.mrna1;Target=comp148741_c0_seq1 187 363 .
Chr2	stalkie_big_nohaplotig	CDS	122473338	122473584	.	-	0	Parent=comp148741_c0_seq1.mrna1;Target=comp148741_c0_seq1 364 610 .
Chr2	gffcl	locus	122485399	122486280	.	+	.	ID=RLOC_00021179;geneIDs=comp146593_c0_seq1.path1;transcripts=comp146593_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122485399	122486280	.	+	.	ID=comp146593_c0_seq1.mrna1;geneID=comp146593_c0_seq1.path1;Name=comp146593_c0_seq1;Dir=sensecoverage=96.3;identity=99.6;matches=704;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021179
Chr2	stalkie_big_nohaplotig	exon	122485399	122485727	99	+	.	Parent=comp146593_c0_seq1.mrna1;Target=comp146593_c0_seq1 10 338 +
Chr2	stalkie_big_nohaplotig	exon	122485824	122486003	100	+	.	Parent=comp146593_c0_seq1.mrna1;Target=comp146593_c0_seq1 339 518 +
Chr2	stalkie_big_nohaplotig	exon	122486083	122486280	100	+	.	Parent=comp146593_c0_seq1.mrna1;Target=comp146593_c0_seq1 519 716 +
Chr2	stalkie_big_nohaplotig	CDS	122485490	122485727	.	+	0	Parent=comp146593_c0_seq1.mrna1;Target=comp146593_c0_seq1 101 338 +
Chr2	stalkie_big_nohaplotig	CDS	122485824	122486003	.	+	2	Parent=comp146593_c0_seq1.mrna1;Target=comp146593_c0_seq1 339 518 +
Chr2	stalkie_big_nohaplotig	CDS	122486083	122486132	.	+	2	Parent=comp146593_c0_seq1.mrna1;Target=comp146593_c0_seq1 519 568 +
Chr2	gffcl	locus	122490256	122491113	.	+	.	ID=RLOC_00021180;geneIDs=comp157943_c1_seq1.path1;transcripts=comp157943_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122490256	122491113	.	+	.	ID=comp157943_c1_seq1.mrna1;geneID=comp157943_c1_seq1.path1;Name=comp157943_c1_seq1;Dir=antisensecoverage=99.4;identity=99.4;matches=711;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021180
Chr2	stalkie_big_nohaplotig	exon	122490256	122490669	99	+	.	Parent=comp157943_c1_seq1.mrna1;Target=comp157943_c1_seq1 302 715 -
Chr2	stalkie_big_nohaplotig	exon	122490744	122490926	100	+	.	Parent=comp157943_c1_seq1.mrna1;Target=comp157943_c1_seq1 119 301 -
Chr2	stalkie_big_nohaplotig	exon	122490996	122491113	98	+	.	Parent=comp157943_c1_seq1.mrna1;Target=comp157943_c1_seq1 1 118 -
Chr2	stalkie_big_nohaplotig	CDS	122490429	122490669	.	+	0	Parent=comp157943_c1_seq1.mrna1;Target=comp157943_c1_seq1 302 542 .
Chr2	stalkie_big_nohaplotig	CDS	122490744	122490926	.	+	2	Parent=comp157943_c1_seq1.mrna1;Target=comp157943_c1_seq1 119 301 .
Chr2	stalkie_big_nohaplotig	CDS	122490996	122491030	.	+	2	Parent=comp157943_c1_seq1.mrna1;Target=comp157943_c1_seq1 84 118 .
Chr2	gffcl	locus	122493149	122494319	.	.	.	ID=RLOC_00021181;geneIDs=comp130259_c0_seq1.path1,comp142893_c0_seq1.path1;transcripts=comp142893_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122493149	122494068	.	+	.	ID=comp142893_c0_seq1.mrna1;geneID=comp142893_c0_seq1.path1;Name=comp142893_c0_seq1;Dir=sensecoverage=99.0;identity=100.0;matches=706;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021181
Chr2	stalkie_big_nohaplotig	exon	122493149	122493539	100	+	.	Parent=comp142893_c0_seq1.mrna1;Target=comp142893_c0_seq1 1 391 +
Chr2	stalkie_big_nohaplotig	exon	122493688	122493870	100	+	.	Parent=comp142893_c0_seq1.mrna1;Target=comp142893_c0_seq1 392 574 +
Chr2	stalkie_big_nohaplotig	exon	122493937	122494068	100	+	.	Parent=comp142893_c0_seq1.mrna1;Target=comp142893_c0_seq1 575 706 +
Chr2	stalkie_big_nohaplotig	CDS	122493266	122493539	.	+	0	Parent=comp142893_c0_seq1.mrna1;Target=comp142893_c0_seq1 118 391 +
Chr2	stalkie_big_nohaplotig	CDS	122493688	122493870	.	+	2	Parent=comp142893_c0_seq1.mrna1;Target=comp142893_c0_seq1 392 574 +
Chr2	stalkie_big_nohaplotig	CDS	122493937	122493971	.	+	2	Parent=comp142893_c0_seq1.mrna1;Target=comp142893_c0_seq1 575 609 +
Chr2	gffcl	locus	122499730	122499946	.	-	.	ID=RLOC_00021182;geneIDs=comp263237_c0_seq1.path1;transcripts=comp263237_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122499730	122499946	.	-	.	ID=comp263237_c0_seq1.mrna1;geneID=comp263237_c0_seq1.path1;Name=comp263237_c0_seq1;Dir=indeterminatecoverage=88.7;identity=91.7;matches=199;mismatches=13;indels=5;unknowns=0;Target=comp263237_c0_seq1 237 26 .;CDS_Target=comp263237_c0_seq1 120 115 .;locus=RLOC_00021182
Chr2	stalkie_big_nohaplotig	exon	122499730	122499946	91	-	.	Parent=comp263237_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	122499847	122499857	.	-	0	Parent=comp263237_c0_seq1.mrna1
Chr2	gffcl	locus	122499961	122500406	.	-	.	ID=RLOC_00021183;geneIDs=comp134910_c0_seq1.path1;transcripts=comp134910_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122499961	122500406	.	-	.	ID=comp134910_c0_seq1.mrna1;geneID=comp134910_c0_seq1.path1;Name=comp134910_c0_seq1;Dir=sensecoverage=87.9;identity=97.1;matches=374;mismatches=9;indels=2;unknowns=0;locus=RLOC_00021183
Chr2	stalkie_big_nohaplotig	exon	122499961	122500027	97	-	.	Parent=comp134910_c0_seq1.mrna1;Target=comp134910_c0_seq1 319 385 +
Chr2	stalkie_big_nohaplotig	exon	122500091	122500406	97	-	.	Parent=comp134910_c0_seq1.mrna1;Target=comp134910_c0_seq1 1 318 +
Chr2	stalkie_big_nohaplotig	CDS	122499978	122500027	.	-	2	Parent=comp134910_c0_seq1.mrna1;Target=comp134910_c0_seq1 319 368 +
Chr2	stalkie_big_nohaplotig	CDS	122500091	122500325	.	-	0	Parent=comp134910_c0_seq1.mrna1;Target=comp134910_c0_seq1 84 318 +
Chr2	gffcl	locus	122500683	122501755	.	-	.	ID=RLOC_00021184;geneIDs=ORF3097.path1;transcripts=ORF3097.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122500683	122501755	.	-	.	ID=ORF3097.mrna1;geneID=ORF3097.path1;Name=ORF3097;Dir=sensecoverage=100.0;identity=99.7;matches=766;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021184
Chr2	stalkie_big_nohaplotig	exon	122500683	122500750	100	-	.	Parent=ORF3097.mrna1;Target=ORF3097 701 768 +
Chr2	stalkie_big_nohaplotig	exon	122500815	122500973	99	-	.	Parent=ORF3097.mrna1;Target=ORF3097 542 700 +
Chr2	stalkie_big_nohaplotig	exon	122501034	122501195	100	-	.	Parent=ORF3097.mrna1;Target=ORF3097 380 541 +
Chr2	stalkie_big_nohaplotig	exon	122501254	122501397	100	-	.	Parent=ORF3097.mrna1;Target=ORF3097 236 379 +
Chr2	stalkie_big_nohaplotig	exon	122501460	122501651	99	-	.	Parent=ORF3097.mrna1;Target=ORF3097 44 235 +
Chr2	stalkie_big_nohaplotig	exon	122501713	122501755	100	-	.	Parent=ORF3097.mrna1;Target=ORF3097 1 43 +
Chr2	stalkie_big_nohaplotig	CDS	122500683	122500750	.	-	2	Parent=ORF3097.mrna1;Target=ORF3097 701 768 +
Chr2	stalkie_big_nohaplotig	CDS	122500815	122500973	.	-	2	Parent=ORF3097.mrna1;Target=ORF3097 542 700 +
Chr2	stalkie_big_nohaplotig	CDS	122501034	122501195	.	-	2	Parent=ORF3097.mrna1;Target=ORF3097 380 541 +
Chr2	stalkie_big_nohaplotig	CDS	122501254	122501397	.	-	2	Parent=ORF3097.mrna1;Target=ORF3097 236 379 +
Chr2	stalkie_big_nohaplotig	CDS	122501460	122501651	.	-	2	Parent=ORF3097.mrna1;Target=ORF3097 44 235 +
Chr2	stalkie_big_nohaplotig	CDS	122501713	122501755	.	-	0	Parent=ORF3097.mrna1;Target=ORF3097 1 43 +
Chr2	gffcl	locus	122519894	122520814	.	-	.	ID=RLOC_00021186;geneIDs=comp138471_c1_seq1.path1;transcripts=comp138471_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122519894	122520814	.	-	.	ID=comp138471_c1_seq1.mrna1;geneID=comp138471_c1_seq1.path1;Name=comp138471_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=921;mismatches=0;indels=0;unknowns=0;Target=comp138471_c1_seq1 921 1 .;CDS_Target=comp138471_c1_seq1 178 2 .;locus=RLOC_00021186
Chr2	stalkie_big_nohaplotig	exon	122519894	122520814	100	-	.	Parent=comp138471_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	122520637	122520813	.	-	0	Parent=comp138471_c1_seq1.mrna1
Chr2	gffcl	locus	122645318	122647038	.	+	.	ID=RLOC_00021187;geneIDs=comp148803_c0_seq1.path1;transcripts=comp148803_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122645318	122647038	.	+	.	ID=comp148803_c0_seq1.mrna1;geneID=comp148803_c0_seq1.path1;Name=comp148803_c0_seq1;Dir=sensecoverage=99.0;identity=100.0;matches=820;mismatches=0;indels=0;unknowns=0;Target=comp148803_c0_seq1 139 669 +;locus=RLOC_00021187
Chr2	stalkie_big_nohaplotig	exon	122645318	122646015	100	+	.	Parent=comp148803_c0_seq1.mrna1;Target=comp148803_c0_seq1 9 706 +
Chr2	stalkie_big_nohaplotig	exon	122646917	122647038	100	+	.	Parent=comp148803_c0_seq1.mrna1;Target=comp148803_c0_seq1 707 828 +
Chr2	stalkie_big_nohaplotig	CDS	122645448	122645978	.	+	0	Parent=comp148803_c0_seq1.mrna1
Chr2	gffcl	locus	122672956	122673344	.	+	.	ID=RLOC_00021188;geneIDs=FBgn0000564.1.path1;transcripts=FBgn0000564.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122672956	122673344	.	+	.	ID=FBgn0000564.1.mrna1;geneID=FBgn0000564.1.path1;Name=FBgn0000564.1;Dir=sensecoverage=100.0;identity=99.7;matches=317;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021188
Chr2	stalkie_big_nohaplotig	exon	122672956	122673091	99	+	.	Parent=FBgn0000564.1.mrna1;Target=FBgn0000564.1 1 136 +
Chr2	stalkie_big_nohaplotig	exon	122673163	122673344	100	+	.	Parent=FBgn0000564.1.mrna1;Target=FBgn0000564.1 137 318 +
Chr2	stalkie_big_nohaplotig	CDS	122672956	122673091	.	+	0	Parent=FBgn0000564.1.mrna1;Target=FBgn0000564.1 1 136 +
Chr2	stalkie_big_nohaplotig	CDS	122673163	122673344	.	+	2	Parent=FBgn0000564.1.mrna1;Target=FBgn0000564.1 137 318 +
Chr2	gffcl	locus	122676975	122693275	.	-	.	ID=RLOC_00021189;geneIDs=FBgn0038511.1.path1;transcripts=FBgn0038511.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122676975	122693275	.	-	.	ID=FBgn0038511.1.mrna1;geneID=FBgn0038511.1.path1;Name=FBgn0038511.1;Dir=sensecoverage=89.8;identity=99.9;matches=2087;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021189
Chr2	stalkie_big_nohaplotig	exon	122676975	122677022	100	-	.	Parent=FBgn0038511.1.mrna1;Target=FBgn0038511.1 2278 2325 +
Chr2	stalkie_big_nohaplotig	exon	122677089	122677185	98	-	.	Parent=FBgn0038511.1.mrna1;Target=FBgn0038511.1 2181 2277 +
Chr2	stalkie_big_nohaplotig	exon	122677777	122678055	100	-	.	Parent=FBgn0038511.1.mrna1;Target=FBgn0038511.1 1902 2180 +
Chr2	stalkie_big_nohaplotig	exon	122678124	122679054	100	-	.	Parent=FBgn0038511.1.mrna1;Target=FBgn0038511.1 971 1901 +
Chr2	stalkie_big_nohaplotig	exon	122680760	122680933	99	-	.	Parent=FBgn0038511.1.mrna1;Target=FBgn0038511.1 797 970 +
Chr2	stalkie_big_nohaplotig	exon	122681253	122681641	100	-	.	Parent=FBgn0038511.1.mrna1;Target=FBgn0038511.1 408 796 +
Chr2	stalkie_big_nohaplotig	exon	122692658	122692748	100	-	.	Parent=FBgn0038511.1.mrna1;Target=FBgn0038511.1 317 407 +
Chr2	stalkie_big_nohaplotig	exon	122693196	122693275	100	-	.	Parent=FBgn0038511.1.mrna1;Target=FBgn0038511.1 237 316 +
Chr2	stalkie_big_nohaplotig	CDS	122676975	122677022	.	-	0	Parent=FBgn0038511.1.mrna1;Target=FBgn0038511.1 2278 2325 +
Chr2	stalkie_big_nohaplotig	CDS	122677089	122677185	.	-	1	Parent=FBgn0038511.1.mrna1;Target=FBgn0038511.1 2181 2277 +
Chr2	stalkie_big_nohaplotig	CDS	122677777	122678055	.	-	1	Parent=FBgn0038511.1.mrna1;Target=FBgn0038511.1 1902 2180 +
Chr2	stalkie_big_nohaplotig	CDS	122678124	122679054	.	-	2	Parent=FBgn0038511.1.mrna1;Target=FBgn0038511.1 971 1901 +
Chr2	stalkie_big_nohaplotig	CDS	122680760	122680933	.	-	2	Parent=FBgn0038511.1.mrna1;Target=FBgn0038511.1 797 970 +
Chr2	stalkie_big_nohaplotig	CDS	122681253	122681641	.	-	1	Parent=FBgn0038511.1.mrna1;Target=FBgn0038511.1 408 796 +
Chr2	stalkie_big_nohaplotig	CDS	122692658	122692748	.	-	2	Parent=FBgn0038511.1.mrna1;Target=FBgn0038511.1 317 407 +
Chr2	stalkie_big_nohaplotig	CDS	122693196	122693274	.	-	0	Parent=FBgn0038511.1.mrna1;Target=FBgn0038511.1 238 316 +
Chr2	gffcl	locus	122694395	122696927	.	+	.	ID=RLOC_00021190;geneIDs=FBgn0038510.1.path1;transcripts=FBgn0038510.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122694395	122696927	.	+	.	ID=FBgn0038510.1.mrna1;geneID=FBgn0038510.1.path1;Name=FBgn0038510.1;Dir=sensecoverage=100.0;identity=100.0;matches=843;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021190
Chr2	stalkie_big_nohaplotig	exon	122694395	122694520	100	+	.	Parent=FBgn0038510.1.mrna1;Target=FBgn0038510.1 1 126 +
Chr2	stalkie_big_nohaplotig	exon	122694672	122694863	100	+	.	Parent=FBgn0038510.1.mrna1;Target=FBgn0038510.1 127 318 +
Chr2	stalkie_big_nohaplotig	exon	122695811	122696122	100	+	.	Parent=FBgn0038510.1.mrna1;Target=FBgn0038510.1 319 630 +
Chr2	stalkie_big_nohaplotig	exon	122696647	122696776	100	+	.	Parent=FBgn0038510.1.mrna1;Target=FBgn0038510.1 631 760 +
Chr2	stalkie_big_nohaplotig	exon	122696845	122696927	100	+	.	Parent=FBgn0038510.1.mrna1;Target=FBgn0038510.1 761 843 +
Chr2	stalkie_big_nohaplotig	CDS	122694395	122694520	.	+	0	Parent=FBgn0038510.1.mrna1;Target=FBgn0038510.1 1 126 +
Chr2	stalkie_big_nohaplotig	CDS	122694672	122694863	.	+	0	Parent=FBgn0038510.1.mrna1;Target=FBgn0038510.1 127 318 +
Chr2	stalkie_big_nohaplotig	CDS	122695811	122696122	.	+	0	Parent=FBgn0038510.1.mrna1;Target=FBgn0038510.1 319 630 +
Chr2	stalkie_big_nohaplotig	CDS	122696647	122696776	.	+	0	Parent=FBgn0038510.1.mrna1;Target=FBgn0038510.1 631 760 +
Chr2	stalkie_big_nohaplotig	CDS	122696845	122696927	.	+	2	Parent=FBgn0038510.1.mrna1;Target=FBgn0038510.1 761 843 +
Chr2	gffcl	locus	122753034	122753625	.	-	.	ID=RLOC_00021191;geneIDs=comp153084_c0_seq1.path1;transcripts=comp153084_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122753034	122753625	.	-	.	ID=comp153084_c0_seq1.mrna1;geneID=comp153084_c0_seq1.path1;Name=comp153084_c0_seq1;Dir=sensecoverage=99.6;identity=91.8;matches=481;mismatches=13;indels=30;unknowns=0;locus=RLOC_00021191
Chr2	stalkie_big_nohaplotig	exon	122753034	122753341	88	-	.	Parent=comp153084_c0_seq1.mrna1;Target=comp153084_c0_seq1 219 496 +
Chr2	stalkie_big_nohaplotig	exon	122753410	122753625	96	-	.	Parent=comp153084_c0_seq1.mrna1;Target=comp153084_c0_seq1 3 218 +
Chr2	stalkie_big_nohaplotig	CDS	122753108	122753341	.	-	0	Parent=comp153084_c0_seq1.mrna1;Target=comp153084_c0_seq1 219 422 +
Chr2	stalkie_big_nohaplotig	CDS	122753410	122753625	.	-	0	Parent=comp153084_c0_seq1.mrna1;Target=comp153084_c0_seq1 3 218 +
Chr2	gffcl	locus	122777635	122784135	.	+	.	ID=RLOC_00021192;geneIDs=ORF1234.path1;transcripts=ORF1234.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122777635	122784135	.	+	.	ID=ORF1234.mrna1;geneID=ORF1234.path1;Name=ORF1234;Dir=sensecoverage=100.0;identity=100.0;matches=1173;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021192
Chr2	stalkie_big_nohaplotig	exon	122777635	122777675	100	+	.	Parent=ORF1234.mrna1;Target=ORF1234 1 41 +
Chr2	stalkie_big_nohaplotig	exon	122782928	122783117	100	+	.	Parent=ORF1234.mrna1;Target=ORF1234 42 231 +
Chr2	stalkie_big_nohaplotig	exon	122783194	122784135	100	+	.	Parent=ORF1234.mrna1;Target=ORF1234 232 1173 +
Chr2	stalkie_big_nohaplotig	CDS	122777635	122777675	.	+	0	Parent=ORF1234.mrna1;Target=ORF1234 1 41 +
Chr2	stalkie_big_nohaplotig	CDS	122782928	122783117	.	+	1	Parent=ORF1234.mrna1;Target=ORF1234 42 231 +
Chr2	stalkie_big_nohaplotig	CDS	122783194	122784135	.	+	0	Parent=ORF1234.mrna1;Target=ORF1234 232 1173 +
Chr2	gffcl	locus	122779844	122780164	.	+	.	ID=RLOC_00021193;geneIDs=comp136026_c1_seq1.path2;transcripts=comp136026_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	122779844	122780164	.	+	.	ID=comp136026_c1_seq1.mrna2;geneID=comp136026_c1_seq1.path2;Name=comp136026_c1_seq1;Dir=indeterminatecoverage=78.3;identity=100.0;matches=321;mismatches=0;indels=0;unknowns=0;Target=comp136026_c1_seq1 410 90 .;CDS_Target=comp136026_c1_seq1 111 90 .;locus=RLOC_00021193
Chr2	stalkie_big_nohaplotig	exon	122779844	122780164	100	+	.	Parent=comp136026_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	122779844	122779865	.	+	2	Parent=comp136026_c1_seq1.mrna2
Chr2	gffcl	locus	122841544	122843939	.	-	.	ID=RLOC_00021194;geneIDs=comp163267_c1_seq1.path1;transcripts=comp163267_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122841544	122843939	.	-	.	ID=comp163267_c1_seq1.mrna1;geneID=comp163267_c1_seq1.path1;Name=comp163267_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=2381;mismatches=14;indels=1;unknowns=0;Target=comp163267_c1_seq1 2395 1 .;CDS_Target=comp163267_c1_seq1 2394 556 .;locus=RLOC_00021194
Chr2	stalkie_big_nohaplotig	exon	122841544	122843939	99	-	.	Parent=comp163267_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	122841545	122843383	.	-	0	Parent=comp163267_c1_seq1.mrna1
Chr2	gffcl	locus	122870929	122976711	.	+	.	ID=RLOC_00021195;geneIDs=comp146811_c0_seq1.path1;transcripts=comp146811_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122870929	122976711	.	+	.	ID=comp146811_c0_seq1.mrna1;geneID=comp146811_c0_seq1.path1;Name=comp146811_c0_seq1;Dir=sensecoverage=63.9;identity=100.0;matches=334;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021195
Chr2	stalkie_big_nohaplotig	exon	122870929	122870931	100	+	.	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 190 192 +
Chr2	stalkie_big_nohaplotig	exon	122873274	122873276	100	+	.	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 193 195 +
Chr2	stalkie_big_nohaplotig	exon	122888549	122888552	100	+	.	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 196 199 +
Chr2	stalkie_big_nohaplotig	exon	122892915	122892916	100	+	.	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 200 201 +
Chr2	stalkie_big_nohaplotig	exon	122898194	122898198	100	+	.	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 202 206 +
Chr2	stalkie_big_nohaplotig	exon	122906110	122906113	100	+	.	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 207 210 +
Chr2	stalkie_big_nohaplotig	exon	122919279	122919281	100	+	.	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 211 213 +
Chr2	stalkie_big_nohaplotig	exon	122935134	122935135	100	+	.	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 214 215 +
Chr2	stalkie_big_nohaplotig	exon	122938282	122938285	100	+	.	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 216 219 +
Chr2	stalkie_big_nohaplotig	exon	122944146	122944148	100	+	.	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 220 222 +
Chr2	stalkie_big_nohaplotig	exon	122959616	122959618	100	+	.	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 223 225 +
Chr2	stalkie_big_nohaplotig	exon	122975193	122975197	100	+	.	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 226 230 +
Chr2	stalkie_big_nohaplotig	exon	122976334	122976336	100	+	.	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 231 233 +
Chr2	stalkie_big_nohaplotig	exon	122976422	122976711	100	+	.	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 234 523 +
Chr2	stalkie_big_nohaplotig	CDS	122870929	122870931	.	+	0	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 190 192 +
Chr2	stalkie_big_nohaplotig	CDS	122873274	122873276	.	+	0	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 193 195 +
Chr2	stalkie_big_nohaplotig	CDS	122888549	122888552	.	+	0	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 196 199 +
Chr2	stalkie_big_nohaplotig	CDS	122892915	122892916	.	+	2	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 200 201 +
Chr2	stalkie_big_nohaplotig	CDS	122898194	122898198	.	+	0	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 202 206 +
Chr2	stalkie_big_nohaplotig	CDS	122906110	122906113	.	+	1	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 207 210 +
Chr2	stalkie_big_nohaplotig	CDS	122919279	122919281	.	+	0	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 211 213 +
Chr2	stalkie_big_nohaplotig	CDS	122935134	122935135	.	+	0	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 214 215 +
Chr2	stalkie_big_nohaplotig	CDS	122938282	122938285	.	+	1	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 216 219 +
Chr2	stalkie_big_nohaplotig	CDS	122944146	122944148	.	+	0	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 220 222 +
Chr2	stalkie_big_nohaplotig	CDS	122959616	122959618	.	+	0	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 223 225 +
Chr2	stalkie_big_nohaplotig	CDS	122975193	122975197	.	+	0	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 226 230 +
Chr2	stalkie_big_nohaplotig	CDS	122976334	122976336	.	+	1	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 231 233 +
Chr2	stalkie_big_nohaplotig	CDS	122976422	122976497	.	+	1	Parent=comp146811_c0_seq1.mrna1;Target=comp146811_c0_seq1 234 309 +
Chr2	gffcl	locus	122899262	122899895	.	+	.	ID=RLOC_00021196;geneIDs=comp154101_c0_seq1.path1;transcripts=comp154101_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122899262	122899895	.	+	.	ID=comp154101_c0_seq1.mrna1;geneID=comp154101_c0_seq1.path1;Name=comp154101_c0_seq1;Dir=sensecoverage=97.2;identity=97.6;matches=569;mismatches=9;indels=5;unknowns=0;locus=RLOC_00021196
Chr2	stalkie_big_nohaplotig	exon	122899262	122899399	96	+	.	Parent=comp154101_c0_seq1.mrna1;Target=comp154101_c0_seq1 18 156 +
Chr2	stalkie_big_nohaplotig	exon	122899454	122899895	97	+	.	Parent=comp154101_c0_seq1.mrna1;Target=comp154101_c0_seq1 157 598 +
Chr2	stalkie_big_nohaplotig	CDS	122899286	122899399	.	+	0	Parent=comp154101_c0_seq1.mrna1;Target=comp154101_c0_seq1 40 156 +
Chr2	stalkie_big_nohaplotig	CDS	122899454	122899468	.	+	0	Parent=comp154101_c0_seq1.mrna1;Target=comp154101_c0_seq1 157 171 +
Chr2	gffcl	locus	122921243	122922154	.	+	.	ID=RLOC_00021197;geneIDs=ORF2140.path1;transcripts=ORF2140.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122921243	122922154	.	+	.	ID=ORF2140.mrna1;geneID=ORF2140.path1;Name=ORF2140;Dir=indeterminatecoverage=100.0;identity=100.0;matches=912;mismatches=0;indels=0;unknowns=0;Target=ORF2140 912 1 .;locus=RLOC_00021197
Chr2	stalkie_big_nohaplotig	exon	122921243	122922154	100	+	.	Parent=ORF2140.mrna1
Chr2	stalkie_big_nohaplotig	CDS	122921243	122922154	.	+	0	Parent=ORF2140.mrna1
Chr2	gffcl	locus	122923658	122923959	.	+	.	ID=RLOC_00021198;geneIDs=FBgn0053905.2.path1;transcripts=FBgn0053905.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122923658	122923959	.	+	.	ID=FBgn0053905.2.mrna1;geneID=FBgn0053905.2.path1;Name=FBgn0053905.2;Dir=indeterminatecoverage=93.2;identity=74.5;matches=225;mismatches=77;indels=0;unknowns=0;Target=FBgn0053905.2 323 22 .;CDS_Target=FBgn0053905.2 321 22 .;locus=RLOC_00021198
Chr2	stalkie_big_nohaplotig	exon	122923658	122923959	74	+	.	Parent=FBgn0053905.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	122923658	122923957	.	+	0	Parent=FBgn0053905.2.mrna1
Chr2	gffcl	locus	122930577	122930834	.	+	.	ID=RLOC_00021199;geneIDs=FBgn0053870.path3;transcripts=FBgn0053870.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	122930577	122930834	.	+	.	ID=FBgn0053870.mrna3;geneID=FBgn0053870.path3;Name=FBgn0053870;Dir=indeterminatecoverage=100.0;identity=99.6;matches=257;mismatches=1;indels=0;unknowns=0;Target=FBgn0053870 258 1 .;locus=RLOC_00021199
Chr2	stalkie_big_nohaplotig	exon	122930577	122930834	99	+	.	Parent=FBgn0053870.mrna3
Chr2	stalkie_big_nohaplotig	CDS	122930577	122930834	.	+	0	Parent=FBgn0053870.mrna3
Chr2	gffcl	locus	122948155	122953230	.	-	.	ID=RLOC_00021200;geneIDs=comp154039_c0_seq1.path1;transcripts=comp154039_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122948155	122953230	.	-	.	ID=comp154039_c0_seq1.mrna1;geneID=comp154039_c0_seq1.path1;Name=comp154039_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=552;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021200
Chr2	stalkie_big_nohaplotig	exon	122948155	122948264	100	-	.	Parent=comp154039_c0_seq1.mrna1;Target=comp154039_c0_seq1 443 552 +
Chr2	stalkie_big_nohaplotig	exon	122952726	122952920	100	-	.	Parent=comp154039_c0_seq1.mrna1;Target=comp154039_c0_seq1 248 442 +
Chr2	stalkie_big_nohaplotig	exon	122952984	122953230	100	-	.	Parent=comp154039_c0_seq1.mrna1;Target=comp154039_c0_seq1 1 247 +
Chr2	stalkie_big_nohaplotig	CDS	122948155	122948264	.	-	2	Parent=comp154039_c0_seq1.mrna1;Target=comp154039_c0_seq1 443 552 +
Chr2	stalkie_big_nohaplotig	CDS	122952726	122952920	.	-	2	Parent=comp154039_c0_seq1.mrna1;Target=comp154039_c0_seq1 248 442 +
Chr2	stalkie_big_nohaplotig	CDS	122952984	122953170	.	-	0	Parent=comp154039_c0_seq1.mrna1;Target=comp154039_c0_seq1 61 247 +
Chr2	gffcl	locus	122951623	122952605	.	-	.	ID=RLOC_00021201;geneIDs=comp150556_c0_seq1.path1;transcripts=comp150556_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122951623	122952605	.	-	.	ID=comp150556_c0_seq1.mrna1;geneID=comp150556_c0_seq1.path1;Name=comp150556_c0_seq1;Dir=antisensecoverage=98.4;identity=98.9;matches=753;mismatches=8;indels=0;unknowns=0;locus=RLOC_00021201
Chr2	stalkie_big_nohaplotig	exon	122951623	122951714	95	-	.	Parent=comp150556_c0_seq1.mrna1;Target=comp150556_c0_seq1 5 96 -
Chr2	stalkie_big_nohaplotig	exon	122951794	122951943	99	-	.	Parent=comp150556_c0_seq1.mrna1;Target=comp150556_c0_seq1 97 246 -
Chr2	stalkie_big_nohaplotig	exon	122952012	122952173	100	-	.	Parent=comp150556_c0_seq1.mrna1;Target=comp150556_c0_seq1 247 408 -
Chr2	stalkie_big_nohaplotig	exon	122952249	122952605	99	-	.	Parent=comp150556_c0_seq1.mrna1;Target=comp150556_c0_seq1 409 765 -
Chr2	stalkie_big_nohaplotig	CDS	122951671	122951714	.	-	2	Parent=comp150556_c0_seq1.mrna1;Target=comp150556_c0_seq1 53 96 .
Chr2	stalkie_big_nohaplotig	CDS	122951794	122951943	.	-	2	Parent=comp150556_c0_seq1.mrna1;Target=comp150556_c0_seq1 97 246 .
Chr2	stalkie_big_nohaplotig	CDS	122952012	122952173	.	-	2	Parent=comp150556_c0_seq1.mrna1;Target=comp150556_c0_seq1 247 408 .
Chr2	stalkie_big_nohaplotig	CDS	122952249	122952603	.	-	0	Parent=comp150556_c0_seq1.mrna1;Target=comp150556_c0_seq1 409 763 .
Chr2	gffcl	locus	122968770	122972101	.	+	.	ID=RLOC_00021202;geneIDs=FBgn0038504.1.path1;transcripts=FBgn0038504.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122968770	122972101	.	+	.	ID=FBgn0038504.1.mrna1;geneID=FBgn0038504.1.path1;Name=FBgn0038504.1;Dir=sensecoverage=100.0;identity=100.0;matches=1860;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021202
Chr2	stalkie_big_nohaplotig	exon	122968770	122969187	100	+	.	Parent=FBgn0038504.1.mrna1;Target=FBgn0038504.1 1 418 +
Chr2	stalkie_big_nohaplotig	exon	122969259	122969832	100	+	.	Parent=FBgn0038504.1.mrna1;Target=FBgn0038504.1 419 992 +
Chr2	stalkie_big_nohaplotig	exon	122971234	122972101	100	+	.	Parent=FBgn0038504.1.mrna1;Target=FBgn0038504.1 993 1860 +
Chr2	stalkie_big_nohaplotig	CDS	122968770	122969187	.	+	0	Parent=FBgn0038504.1.mrna1;Target=FBgn0038504.1 1 418 +
Chr2	stalkie_big_nohaplotig	CDS	122969259	122969832	.	+	2	Parent=FBgn0038504.1.mrna1;Target=FBgn0038504.1 419 992 +
Chr2	stalkie_big_nohaplotig	CDS	122971234	122972101	.	+	1	Parent=FBgn0038504.1.mrna1;Target=FBgn0038504.1 993 1860 +
Chr2	gffcl	locus	122977298	122982268	.	+	.	ID=RLOC_00021203;geneIDs=FBgn0025456.1.path1,comp150037_c0_seq1.path2,comp159028_c0_seq1.path1;transcripts=comp159028_c0_seq1.mrna1,FBgn0025456.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122977298	122982226	.	+	.	ID=comp159028_c0_seq1.mrna1;geneID=comp159028_c0_seq1.path1;Name=comp159028_c0_seq1;Dir=antisensecoverage=99.3;identity=97.6;matches=3536;mismatches=41;indels=46;unknowns=0;locus=RLOC_00021203
Chr2	stalkie_big_nohaplotig	exon	122977298	122978488	98	+	.	Parent=comp159028_c0_seq1.mrna1;Target=comp159028_c0_seq1 2454 3647 -
Chr2	stalkie_big_nohaplotig	exon	122979512	122979971	100	+	.	Parent=comp159028_c0_seq1.mrna1;Target=comp159028_c0_seq1 1994 2453 -
Chr2	stalkie_big_nohaplotig	exon	122980237	122980318	100	+	.	Parent=comp159028_c0_seq1.mrna1;Target=comp159028_c0_seq1 1912 1993 -
Chr2	stalkie_big_nohaplotig	exon	122980383	122982226	96	+	.	Parent=comp159028_c0_seq1.mrna1;Target=comp159028_c0_seq1 25 1911 -
Chr2	stalkie_big_nohaplotig	CDS	122979522	122979971	.	+	0	Parent=comp159028_c0_seq1.mrna1;Target=comp159028_c0_seq1 1994 2443 .
Chr2	stalkie_big_nohaplotig	CDS	122980237	122980318	.	+	0	Parent=comp159028_c0_seq1.mrna1;Target=comp159028_c0_seq1 1912 1993 .
Chr2	stalkie_big_nohaplotig	CDS	122980383	122980498	.	+	2	Parent=comp159028_c0_seq1.mrna1;Target=comp159028_c0_seq1 1796 1911 .
Chr2	stalkie_big_nohaplotig	mRNA	122978600	122980495	.	+	.	ID=FBgn0025456.1.mrna1;geneID=FBgn0025456.1.path1;Name=FBgn0025456.1;Dir=sensecoverage=100.0;identity=100.0;matches=693;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021203
Chr2	stalkie_big_nohaplotig	exon	122978600	122978637	100	+	.	Parent=FBgn0025456.1.mrna1;Target=FBgn0025456.1 1 38 +
Chr2	stalkie_big_nohaplotig	exon	122979512	122979971	100	+	.	Parent=FBgn0025456.1.mrna1;Target=FBgn0025456.1 39 498 +
Chr2	stalkie_big_nohaplotig	exon	122980237	122980318	100	+	.	Parent=FBgn0025456.1.mrna1;Target=FBgn0025456.1 499 580 +
Chr2	stalkie_big_nohaplotig	exon	122980383	122980495	100	+	.	Parent=FBgn0025456.1.mrna1;Target=FBgn0025456.1 581 693 +
Chr2	stalkie_big_nohaplotig	CDS	122978600	122978637	.	+	0	Parent=FBgn0025456.1.mrna1;Target=FBgn0025456.1 1 38 +
Chr2	stalkie_big_nohaplotig	CDS	122979512	122979971	.	+	1	Parent=FBgn0025456.1.mrna1;Target=FBgn0025456.1 39 498 +
Chr2	stalkie_big_nohaplotig	CDS	122980237	122980318	.	+	0	Parent=FBgn0025456.1.mrna1;Target=FBgn0025456.1 499 580 +
Chr2	stalkie_big_nohaplotig	CDS	122980383	122980495	.	+	2	Parent=FBgn0025456.1.mrna1;Target=FBgn0025456.1 581 693 +
Chr2	gffcl	locus	122983952	123033876	.	+	.	ID=RLOC_00021204;geneIDs=FBgn0038499.1.path1;transcripts=FBgn0038499.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122983952	123033876	.	+	.	ID=FBgn0038499.1.mrna1;geneID=FBgn0038499.1.path1;Name=FBgn0038499.1;Dir=sensecoverage=100.0;identity=100.0;matches=1968;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021204
Chr2	stalkie_big_nohaplotig	exon	122983952	122984414	100	+	.	Parent=FBgn0038499.1.mrna1;Target=FBgn0038499.1 1 463 +
Chr2	stalkie_big_nohaplotig	exon	122984491	122984595	100	+	.	Parent=FBgn0038499.1.mrna1;Target=FBgn0038499.1 464 568 +
Chr2	stalkie_big_nohaplotig	exon	123030897	123031046	100	+	.	Parent=FBgn0038499.1.mrna1;Target=FBgn0038499.1 569 718 +
Chr2	stalkie_big_nohaplotig	exon	123031712	123031938	100	+	.	Parent=FBgn0038499.1.mrna1;Target=FBgn0038499.1 719 945 +
Chr2	stalkie_big_nohaplotig	exon	123032723	123033480	100	+	.	Parent=FBgn0038499.1.mrna1;Target=FBgn0038499.1 946 1703 +
Chr2	stalkie_big_nohaplotig	exon	123033547	123033674	100	+	.	Parent=FBgn0038499.1.mrna1;Target=FBgn0038499.1 1704 1831 +
Chr2	stalkie_big_nohaplotig	exon	123033740	123033876	100	+	.	Parent=FBgn0038499.1.mrna1;Target=FBgn0038499.1 1832 1968 +
Chr2	stalkie_big_nohaplotig	CDS	122983952	122984414	.	+	0	Parent=FBgn0038499.1.mrna1;Target=FBgn0038499.1 1 463 +
Chr2	stalkie_big_nohaplotig	CDS	122984491	122984595	.	+	2	Parent=FBgn0038499.1.mrna1;Target=FBgn0038499.1 464 568 +
Chr2	stalkie_big_nohaplotig	CDS	123030897	123031046	.	+	2	Parent=FBgn0038499.1.mrna1;Target=FBgn0038499.1 569 718 +
Chr2	stalkie_big_nohaplotig	CDS	123031712	123031938	.	+	2	Parent=FBgn0038499.1.mrna1;Target=FBgn0038499.1 719 945 +
Chr2	stalkie_big_nohaplotig	CDS	123032723	123033480	.	+	0	Parent=FBgn0038499.1.mrna1;Target=FBgn0038499.1 946 1703 +
Chr2	stalkie_big_nohaplotig	CDS	123033547	123033674	.	+	1	Parent=FBgn0038499.1.mrna1;Target=FBgn0038499.1 1704 1831 +
Chr2	stalkie_big_nohaplotig	CDS	123033740	123033876	.	+	2	Parent=FBgn0038499.1.mrna1;Target=FBgn0038499.1 1832 1968 +
Chr2	gffcl	locus	122986559	123049527	.	-	.	ID=RLOC_00021205;geneIDs=comp134702_c0_seq1.path1;transcripts=comp134702_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122986559	123049527	.	-	.	ID=comp134702_c0_seq1.mrna1;geneID=comp134702_c0_seq1.path1;Name=comp134702_c0_seq1;Dir=indeterminatecoverage=89.8;identity=85.1;matches=428;mismatches=56;indels=19;unknowns=0;locus=RLOC_00021205
Chr2	stalkie_big_nohaplotig	exon	122986559	122986862	96	-	.	Parent=comp134702_c0_seq1.mrna1;Target=comp134702_c0_seq1 551 253 .
Chr2	stalkie_big_nohaplotig	exon	122990562	122990614	68	-	.	Parent=comp134702_c0_seq1.mrna1;Target=comp134702_c0_seq1 252 202 .
Chr2	stalkie_big_nohaplotig	exon	122996627	122996647	52	-	.	Parent=comp134702_c0_seq1.mrna1;Target=comp134702_c0_seq1 201 181 .
Chr2	stalkie_big_nohaplotig	exon	123006130	123006157	56	-	.	Parent=comp134702_c0_seq1.mrna1;Target=comp134702_c0_seq1 180 144 .
Chr2	stalkie_big_nohaplotig	exon	123014516	123014527	91	-	.	Parent=comp134702_c0_seq1.mrna1;Target=comp134702_c0_seq1 143 132 .
Chr2	stalkie_big_nohaplotig	exon	123021851	123021890	53	-	.	Parent=comp134702_c0_seq1.mrna1;Target=comp134702_c0_seq1 131 91 .
Chr2	stalkie_big_nohaplotig	exon	123032189	123032190	100	-	.	Parent=comp134702_c0_seq1.mrna1;Target=comp134702_c0_seq1 90 89 .
Chr2	stalkie_big_nohaplotig	exon	123035198	123035208	81	-	.	Parent=comp134702_c0_seq1.mrna1;Target=comp134702_c0_seq1 88 78 .
Chr2	stalkie_big_nohaplotig	exon	123035521	123035522	100	-	.	Parent=comp134702_c0_seq1.mrna1;Target=comp134702_c0_seq1 77 76 .
Chr2	stalkie_big_nohaplotig	exon	123040233	123040236	100	-	.	Parent=comp134702_c0_seq1.mrna1;Target=comp134702_c0_seq1 75 72 .
Chr2	stalkie_big_nohaplotig	exon	123043923	123043928	100	-	.	Parent=comp134702_c0_seq1.mrna1;Target=comp134702_c0_seq1 71 66 .
Chr2	stalkie_big_nohaplotig	exon	123049519	123049527	100	-	.	Parent=comp134702_c0_seq1.mrna1;Target=comp134702_c0_seq1 65 57 .
Chr2	stalkie_big_nohaplotig	CDS	122986853	122986862	.	-	1	Parent=comp134702_c0_seq1.mrna1;Target=comp134702_c0_seq1 262 253 .
Chr2	stalkie_big_nohaplotig	CDS	122990562	122990578	.	-	0	Parent=comp134702_c0_seq1.mrna1;Target=comp134702_c0_seq1 252 236 .
Chr2	gffcl	locus	122987155	122999488	.	-	.	ID=RLOC_00021206;geneIDs=FBgn0262871.1.path1,comp156105_c0_seq1.path1;transcripts=comp156105_c0_seq1.mrna1,FBgn0262871.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	122987155	122999488	.	-	.	ID=comp156105_c0_seq1.mrna1;geneID=comp156105_c0_seq1.path1;Name=comp156105_c0_seq1;Dir=antisensecoverage=91.1;identity=99.2;matches=3088;mismatches=11;indels=13;unknowns=0;locus=RLOC_00021206
Chr2	stalkie_big_nohaplotig	exon	122987155	122988332	99	-	.	Parent=comp156105_c0_seq1.mrna1;Target=comp156105_c0_seq1 1 1179 -
Chr2	stalkie_big_nohaplotig	exon	122988971	122989428	98	-	.	Parent=comp156105_c0_seq1.mrna1;Target=comp156105_c0_seq1 1180 1637 -
Chr2	stalkie_big_nohaplotig	exon	122989496	122989712	100	-	.	Parent=comp156105_c0_seq1.mrna1;Target=comp156105_c0_seq1 1638 1854 -
Chr2	stalkie_big_nohaplotig	exon	122989781	122989928	100	-	.	Parent=comp156105_c0_seq1.mrna1;Target=comp156105_c0_seq1 1855 2002 -
Chr2	stalkie_big_nohaplotig	exon	122990002	122990439	97	-	.	Parent=comp156105_c0_seq1.mrna1;Target=comp156105_c0_seq1 2003 2440 -
Chr2	stalkie_big_nohaplotig	exon	122998823	122999488	99	-	.	Parent=comp156105_c0_seq1.mrna1;Target=comp156105_c0_seq1 2441 3106 -
Chr2	stalkie_big_nohaplotig	CDS	122987822	122988332	.	-	1	Parent=comp156105_c0_seq1.mrna1;Target=comp156105_c0_seq1 669 1179 .
Chr2	stalkie_big_nohaplotig	CDS	122988971	122989428	.	-	0	Parent=comp156105_c0_seq1.mrna1;Target=comp156105_c0_seq1 1180 1637 .
Chr2	stalkie_big_nohaplotig	CDS	122989496	122989712	.	-	1	Parent=comp156105_c0_seq1.mrna1;Target=comp156105_c0_seq1 1638 1854 .
Chr2	stalkie_big_nohaplotig	CDS	122989781	122989928	.	-	2	Parent=comp156105_c0_seq1.mrna1;Target=comp156105_c0_seq1 1855 2002 .
Chr2	stalkie_big_nohaplotig	CDS	122990002	122990439	.	-	2	Parent=comp156105_c0_seq1.mrna1;Target=comp156105_c0_seq1 2003 2440 .
Chr2	stalkie_big_nohaplotig	CDS	122998823	122999186	.	-	0	Parent=comp156105_c0_seq1.mrna1;Target=comp156105_c0_seq1 2441 2804 .
Chr2	stalkie_big_nohaplotig	mRNA	122987825	122993208	.	-	.	ID=FBgn0262871.1.mrna1;geneID=FBgn0262871.1.path1;Name=FBgn0262871.1;Dir=sensecoverage=100.0;identity=99.5;matches=1881;mismatches=9;indels=0;unknowns=0;locus=RLOC_00021206
Chr2	stalkie_big_nohaplotig	exon	122987825	122988332	99	-	.	Parent=FBgn0262871.1.mrna1;Target=FBgn0262871.1 1383 1890 +
Chr2	stalkie_big_nohaplotig	exon	122988971	122989428	98	-	.	Parent=FBgn0262871.1.mrna1;Target=FBgn0262871.1 925 1382 +
Chr2	stalkie_big_nohaplotig	exon	122989496	122989712	100	-	.	Parent=FBgn0262871.1.mrna1;Target=FBgn0262871.1 708 924 +
Chr2	stalkie_big_nohaplotig	exon	122989781	122989928	100	-	.	Parent=FBgn0262871.1.mrna1;Target=FBgn0262871.1 560 707 +
Chr2	stalkie_big_nohaplotig	exon	122990002	122990439	99	-	.	Parent=FBgn0262871.1.mrna1;Target=FBgn0262871.1 122 559 +
Chr2	stalkie_big_nohaplotig	exon	122993088	122993208	99	-	.	Parent=FBgn0262871.1.mrna1;Target=FBgn0262871.1 1 121 +
Chr2	stalkie_big_nohaplotig	CDS	122987825	122988332	.	-	1	Parent=FBgn0262871.1.mrna1;Target=FBgn0262871.1 1383 1890 +
Chr2	stalkie_big_nohaplotig	CDS	122988971	122989428	.	-	0	Parent=FBgn0262871.1.mrna1;Target=FBgn0262871.1 925 1382 +
Chr2	stalkie_big_nohaplotig	CDS	122989496	122989712	.	-	1	Parent=FBgn0262871.1.mrna1;Target=FBgn0262871.1 708 924 +
Chr2	stalkie_big_nohaplotig	CDS	122989781	122989928	.	-	2	Parent=FBgn0262871.1.mrna1;Target=FBgn0262871.1 560 707 +
Chr2	stalkie_big_nohaplotig	CDS	122990002	122990439	.	-	2	Parent=FBgn0262871.1.mrna1;Target=FBgn0262871.1 122 559 +
Chr2	stalkie_big_nohaplotig	CDS	122993088	122993208	.	-	0	Parent=FBgn0262871.1.mrna1;Target=FBgn0262871.1 1 121 +
Chr2	gffcl	locus	123074746	123515288	.	-	.	ID=RLOC_00021207;geneIDs=comp146530_c0_seq1.path1,comp149723_c0_seq1.path1;transcripts=comp146530_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123075624	123515288	.	-	.	ID=comp146530_c0_seq1.mrna1;geneID=comp146530_c0_seq1.path1;Name=comp146530_c0_seq1;Dir=indeterminatecoverage=78.2;identity=98.3;matches=594;mismatches=4;indels=6;unknowns=0;locus=RLOC_00021207
Chr2	stalkie_big_nohaplotig	exon	123075624	123076131	98	-	.	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 804 291 .
Chr2	stalkie_big_nohaplotig	exon	123088436	123088438	100	-	.	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 290 288 .
Chr2	stalkie_big_nohaplotig	exon	123093487	123093488	100	-	.	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 287 286 .
Chr2	stalkie_big_nohaplotig	exon	123106833	123106842	100	-	.	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 278 269 .
Chr2	stalkie_big_nohaplotig	exon	123108617	123108624	100	-	.	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 268 261 .
Chr2	stalkie_big_nohaplotig	exon	123464687	123464692	100	-	.	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 260 255 .
Chr2	stalkie_big_nohaplotig	exon	123471101	123471103	100	-	.	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 254 252 .
Chr2	stalkie_big_nohaplotig	exon	123478153	123478158	100	-	.	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 251 246 .
Chr2	stalkie_big_nohaplotig	exon	123483558	123483562	100	-	.	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 245 241 .
Chr2	stalkie_big_nohaplotig	exon	123490062	123490074	84	-	.	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 240 228 .
Chr2	stalkie_big_nohaplotig	exon	123493694	123493703	100	-	.	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 227 218 .
Chr2	stalkie_big_nohaplotig	exon	123497656	123497660	100	-	.	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 217 213 .
Chr2	stalkie_big_nohaplotig	exon	123500225	123500234	100	-	.	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 171 162 .
Chr2	stalkie_big_nohaplotig	exon	123507801	123507806	100	-	.	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 161 156 .
Chr2	stalkie_big_nohaplotig	exon	123515287	123515288	100	-	.	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 155 154 .
Chr2	stalkie_big_nohaplotig	CDS	123076105	123076131	.	-	0	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 317 291 .
Chr2	stalkie_big_nohaplotig	CDS	123088436	123088438	.	-	0	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 290 288 .
Chr2	stalkie_big_nohaplotig	CDS	123093487	123093488	.	-	2	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 287 286 .
Chr2	stalkie_big_nohaplotig	CDS	123106833	123106842	.	-	0	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 278 269 .
Chr2	stalkie_big_nohaplotig	CDS	123108617	123108624	.	-	2	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 268 261 .
Chr2	stalkie_big_nohaplotig	CDS	123464687	123464692	.	-	2	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 260 255 .
Chr2	stalkie_big_nohaplotig	CDS	123471101	123471103	.	-	2	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 254 252 .
Chr2	stalkie_big_nohaplotig	CDS	123478153	123478158	.	-	2	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 251 246 .
Chr2	stalkie_big_nohaplotig	CDS	123483558	123483562	.	-	1	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 245 241 .
Chr2	stalkie_big_nohaplotig	CDS	123490062	123490074	.	-	2	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 240 228 .
Chr2	stalkie_big_nohaplotig	CDS	123493694	123493703	.	-	0	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 227 218 .
Chr2	stalkie_big_nohaplotig	CDS	123497656	123497660	.	-	2	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 217 213 .
Chr2	stalkie_big_nohaplotig	CDS	123500225	123500234	.	-	0	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 171 162 .
Chr2	stalkie_big_nohaplotig	CDS	123507801	123507806	.	-	0	Parent=comp146530_c0_seq1.mrna1;Target=comp146530_c0_seq1 161 156 .
Chr2	gffcl	locus	123096379	123099033	.	+	.	ID=RLOC_00021208;geneIDs=ORF169.path1;transcripts=ORF169.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123096379	123099033	.	+	.	ID=ORF169.mrna1;geneID=ORF169.path1;Name=ORF169;Dir=sensecoverage=98.2;identity=97.5;matches=2573;mismatches=23;indels=42;unknowns=0;locus=RLOC_00021208
Chr2	stalkie_big_nohaplotig	exon	123096379	123096702	100	+	.	Parent=ORF169.mrna1;Target=ORF169 22 345 +
Chr2	stalkie_big_nohaplotig	exon	123096762	123099033	97	+	.	Parent=ORF169.mrna1;Target=ORF169 346 2659 +
Chr2	stalkie_big_nohaplotig	CDS	123096379	123096702	.	+	0	Parent=ORF169.mrna1;Target=ORF169 22 345 +
Chr2	stalkie_big_nohaplotig	CDS	123096762	123099032	.	+	0	Parent=ORF169.mrna1;Target=ORF169 346 2658 +
Chr2	gffcl	locus	123114629	123115247	.	+	.	ID=RLOC_00021209;geneIDs=comp151259_c0_seq1.path1;transcripts=comp151259_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123114629	123115247	.	+	.	ID=comp151259_c0_seq1.mrna1;geneID=comp151259_c0_seq1.path1;Name=comp151259_c0_seq1;Dir=antisensecoverage=99.6;identity=98.4;matches=539;mismatches=9;indels=0;unknowns=0;locus=RLOC_00021209
Chr2	stalkie_big_nohaplotig	exon	123114629	123114872	97	+	.	Parent=comp151259_c0_seq1.mrna1;Target=comp151259_c0_seq1 306 549 -
Chr2	stalkie_big_nohaplotig	exon	123114944	123115247	98	+	.	Parent=comp151259_c0_seq1.mrna1;Target=comp151259_c0_seq1 2 305 -
Chr2	stalkie_big_nohaplotig	CDS	123114699	123114872	.	+	0	Parent=comp151259_c0_seq1.mrna1;Target=comp151259_c0_seq1 306 479 .
Chr2	stalkie_big_nohaplotig	CDS	123114944	123115228	.	+	0	Parent=comp151259_c0_seq1.mrna1;Target=comp151259_c0_seq1 21 305 .
Chr2	gffcl	locus	123117402	123118437	.	+	.	ID=RLOC_00021210;geneIDs=comp150423_c0_seq1.path1;transcripts=comp150423_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123117402	123118437	.	+	.	ID=comp150423_c0_seq1.mrna1;geneID=comp150423_c0_seq1.path1;Name=comp150423_c0_seq1;Dir=sensecoverage=99.9;identity=96.1;matches=962;mismatches=8;indels=31;unknowns=0;locus=RLOC_00021210
Chr2	stalkie_big_nohaplotig	exon	123117402	123117705	98	+	.	Parent=comp150423_c0_seq1.mrna1;Target=comp150423_c0_seq1 2 305 +
Chr2	stalkie_big_nohaplotig	exon	123117772	123118437	94	+	.	Parent=comp150423_c0_seq1.mrna1;Target=comp150423_c0_seq1 306 1002 +
Chr2	stalkie_big_nohaplotig	CDS	123117529	123117705	.	+	0	Parent=comp150423_c0_seq1.mrna1;Target=comp150423_c0_seq1 129 305 +
Chr2	stalkie_big_nohaplotig	CDS	123117772	123118023	.	+	0	Parent=comp150423_c0_seq1.mrna1;Target=comp150423_c0_seq1 306 557 +
Chr2	gffcl	locus	123123831	123155132	.	-	.	ID=RLOC_00021211;geneIDs=FBgn0038498.1.path1;transcripts=FBgn0038498.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123123831	123155132	.	-	.	ID=FBgn0038498.1.mrna1;geneID=FBgn0038498.1.path1;Name=FBgn0038498.1;Dir=indeterminatecoverage=29.9;identity=99.2;matches=372;mismatches=1;indels=2;unknowns=0;locus=RLOC_00021211
Chr2	stalkie_big_nohaplotig	exon	123123831	123123966	100	-	.	Parent=FBgn0038498.1.mrna1;Target=FBgn0038498.1 574 439 .
Chr2	stalkie_big_nohaplotig	exon	123128136	123128357	98	-	.	Parent=FBgn0038498.1.mrna1;Target=FBgn0038498.1 438 215 .
Chr2	stalkie_big_nohaplotig	exon	123135908	123135912	100	-	.	Parent=FBgn0038498.1.mrna1;Target=FBgn0038498.1 214 210 .
Chr2	stalkie_big_nohaplotig	exon	123141066	123141069	100	-	.	Parent=FBgn0038498.1.mrna1;Target=FBgn0038498.1 209 206 .
Chr2	stalkie_big_nohaplotig	exon	123149108	123149111	100	-	.	Parent=FBgn0038498.1.mrna1;Target=FBgn0038498.1 205 202 .
Chr2	stalkie_big_nohaplotig	exon	123155131	123155132	100	-	.	Parent=FBgn0038498.1.mrna1;Target=FBgn0038498.1 201 200 .
Chr2	stalkie_big_nohaplotig	CDS	123128355	123128357	.	-	0	Parent=FBgn0038498.1.mrna1;Target=FBgn0038498.1 217 215 .
Chr2	stalkie_big_nohaplotig	CDS	123135908	123135912	.	-	2	Parent=FBgn0038498.1.mrna1;Target=FBgn0038498.1 214 210 .
Chr2	stalkie_big_nohaplotig	CDS	123141066	123141069	.	-	0	Parent=FBgn0038498.1.mrna1;Target=FBgn0038498.1 209 206 .
Chr2	stalkie_big_nohaplotig	CDS	123149108	123149111	.	-	1	Parent=FBgn0038498.1.mrna1;Target=FBgn0038498.1 205 202 .
Chr2	stalkie_big_nohaplotig	CDS	123155131	123155132	.	-	0	Parent=FBgn0038498.1.mrna1;Target=FBgn0038498.1 201 200 .
Chr2	gffcl	locus	123152853	123153626	.	-	.	ID=RLOC_00021212;geneIDs=comp148786_c0_seq1.path1;transcripts=comp148786_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123152853	123153626	.	-	.	ID=comp148786_c0_seq1.mrna1;geneID=comp148786_c0_seq1.path1;Name=comp148786_c0_seq1;Dir=antisensecoverage=95.7;identity=99.8;matches=624;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021212
Chr2	stalkie_big_nohaplotig	exon	123152853	123153068	99	-	.	Parent=comp148786_c0_seq1.mrna1;Target=comp148786_c0_seq1 7 222 -
Chr2	stalkie_big_nohaplotig	exon	123153143	123153295	100	-	.	Parent=comp148786_c0_seq1.mrna1;Target=comp148786_c0_seq1 223 375 -
Chr2	stalkie_big_nohaplotig	exon	123153371	123153626	100	-	.	Parent=comp148786_c0_seq1.mrna1;Target=comp148786_c0_seq1 376 631 -
Chr2	stalkie_big_nohaplotig	CDS	123153058	123153068	.	-	2	Parent=comp148786_c0_seq1.mrna1;Target=comp148786_c0_seq1 212 222 .
Chr2	stalkie_big_nohaplotig	CDS	123153143	123153295	.	-	2	Parent=comp148786_c0_seq1.mrna1;Target=comp148786_c0_seq1 223 375 .
Chr2	stalkie_big_nohaplotig	CDS	123153371	123153590	.	-	0	Parent=comp148786_c0_seq1.mrna1;Target=comp148786_c0_seq1 376 595 .
Chr2	gffcl	locus	123246118	123246649	.	-	.	ID=RLOC_00021213;geneIDs=comp147805_c0_seq1.path1;transcripts=comp147805_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123246118	123246649	.	-	.	ID=comp147805_c0_seq1.mrna1;geneID=comp147805_c0_seq1.path1;Name=comp147805_c0_seq1;Dir=antisensecoverage=96.5;identity=93.3;matches=459;mismatches=12;indels=21;unknowns=0;locus=RLOC_00021213
Chr2	stalkie_big_nohaplotig	exon	123246118	123246478	91	-	.	Parent=comp147805_c0_seq1.mrna1;Target=comp147805_c0_seq1 1 382 -
Chr2	stalkie_big_nohaplotig	exon	123246540	123246649	99	-	.	Parent=comp147805_c0_seq1.mrna1;Target=comp147805_c0_seq1 383 492 -
Chr2	stalkie_big_nohaplotig	CDS	123246299	123246478	.	-	0	Parent=comp147805_c0_seq1.mrna1;Target=comp147805_c0_seq1 182 382 .
Chr2	stalkie_big_nohaplotig	CDS	123246540	123246551	.	-	0	Parent=comp147805_c0_seq1.mrna1;Target=comp147805_c0_seq1 383 394 .
Chr2	gffcl	locus	123252520	123253358	.	-	.	ID=RLOC_00021214;geneIDs=comp181391_c0_seq1.path1;transcripts=comp181391_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123252520	123253358	.	-	.	ID=comp181391_c0_seq1.mrna1;geneID=comp181391_c0_seq1.path1;Name=comp181391_c0_seq1;Dir=antisensecoverage=97.2;identity=99.1;matches=527;mismatches=2;indels=3;unknowns=0;locus=RLOC_00021214
Chr2	stalkie_big_nohaplotig	exon	123252520	123252700	97	-	.	Parent=comp181391_c0_seq1.mrna1;Target=comp181391_c0_seq1 15 192 -
Chr2	stalkie_big_nohaplotig	exon	123252946	123253106	100	-	.	Parent=comp181391_c0_seq1.mrna1;Target=comp181391_c0_seq1 193 353 -
Chr2	stalkie_big_nohaplotig	exon	123253169	123253358	99	-	.	Parent=comp181391_c0_seq1.mrna1;Target=comp181391_c0_seq1 354 543 -
Chr2	stalkie_big_nohaplotig	CDS	123252598	123252700	.	-	1	Parent=comp181391_c0_seq1.mrna1;Target=comp181391_c0_seq1 90 192 .
Chr2	stalkie_big_nohaplotig	CDS	123252946	123253106	.	-	0	Parent=comp181391_c0_seq1.mrna1;Target=comp181391_c0_seq1 193 353 .
Chr2	stalkie_big_nohaplotig	CDS	123253169	123253183	.	-	0	Parent=comp181391_c0_seq1.mrna1;Target=comp181391_c0_seq1 354 368 .
Chr2	gffcl	locus	123255076	123255877	.	+	.	ID=RLOC_00021215;geneIDs=comp144349_c0_seq1.path1;transcripts=comp144349_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123255076	123255877	.	+	.	ID=comp144349_c0_seq1.mrna1;geneID=comp144349_c0_seq1.path1;Name=comp144349_c0_seq1;Dir=antisensecoverage=99.8;identity=99.5;matches=621;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021215
Chr2	stalkie_big_nohaplotig	exon	123255076	123255222	100	+	.	Parent=comp144349_c0_seq1.mrna1;Target=comp144349_c0_seq1 479 625 -
Chr2	stalkie_big_nohaplotig	exon	123255299	123255479	98	+	.	Parent=comp144349_c0_seq1.mrna1;Target=comp144349_c0_seq1 298 478 -
Chr2	stalkie_big_nohaplotig	exon	123255582	123255877	99	+	.	Parent=comp144349_c0_seq1.mrna1;Target=comp144349_c0_seq1 2 297 -
Chr2	stalkie_big_nohaplotig	CDS	123255450	123255479	.	+	0	Parent=comp144349_c0_seq1.mrna1;Target=comp144349_c0_seq1 298 327 .
Chr2	stalkie_big_nohaplotig	CDS	123255582	123255803	.	+	0	Parent=comp144349_c0_seq1.mrna1;Target=comp144349_c0_seq1 76 297 .
Chr2	gffcl	locus	123260203	123262868	.	+	.	ID=RLOC_00021216;geneIDs=comp142786_c0_seq1.path1;transcripts=comp142786_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123260203	123262868	.	+	.	ID=comp142786_c0_seq1.mrna1;geneID=comp142786_c0_seq1.path1;Name=comp142786_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=667;mismatches=0;indels=0;unknowns=0;Target=comp142786_c0_seq1 158 283 +;locus=RLOC_00021216
Chr2	stalkie_big_nohaplotig	exon	123260203	123260255	100	+	.	Parent=comp142786_c0_seq1.mrna1;Target=comp142786_c0_seq1 1 53 +
Chr2	stalkie_big_nohaplotig	exon	123261933	123261975	100	+	.	Parent=comp142786_c0_seq1.mrna1;Target=comp142786_c0_seq1 54 96 +
Chr2	stalkie_big_nohaplotig	exon	123262298	123262868	100	+	.	Parent=comp142786_c0_seq1.mrna1;Target=comp142786_c0_seq1 97 667 +
Chr2	stalkie_big_nohaplotig	CDS	123262359	123262484	.	+	0	Parent=comp142786_c0_seq1.mrna1
Chr2	gffcl	locus	123268363	123317650	.	-	.	ID=RLOC_00021217;geneIDs=FBgn0038498.1.path2;transcripts=FBgn0038498.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	123268363	123317650	.	-	.	ID=FBgn0038498.1.mrna2;geneID=FBgn0038498.1.path2;Name=FBgn0038498.1;Dir=sensecoverage=54.2;identity=99.7;matches=678;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021217
Chr2	stalkie_big_nohaplotig	exon	123268363	123268619	99	-	.	Parent=FBgn0038498.1.mrna2;Target=FBgn0038498.1 998 1254 +
Chr2	stalkie_big_nohaplotig	exon	123268751	123269039	99	-	.	Parent=FBgn0038498.1.mrna2;Target=FBgn0038498.1 709 997 +
Chr2	stalkie_big_nohaplotig	exon	123317517	123317650	100	-	.	Parent=FBgn0038498.1.mrna2;Target=FBgn0038498.1 575 708 +
Chr2	gffcl	locus	123338028	123348142	.	+	.	ID=RLOC_00021218;geneIDs=FBgn0038494.1.path2;transcripts=FBgn0038494.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	123338028	123348142	.	+	.	ID=FBgn0038494.1.mrna2;geneID=FBgn0038494.1.path2;Name=FBgn0038494.1;Dir=sensecoverage=37.9;identity=100.0;matches=489;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021218
Chr2	stalkie_big_nohaplotig	exon	123338028	123338337	100	+	.	Parent=FBgn0038494.1.mrna2;Target=FBgn0038494.1 802 1111 +
Chr2	stalkie_big_nohaplotig	exon	123347964	123348142	100	+	.	Parent=FBgn0038494.1.mrna2;Target=FBgn0038494.1 1112 1290 +
Chr2	stalkie_big_nohaplotig	CDS	123338028	123338337	.	+	0	Parent=FBgn0038494.1.mrna2;Target=FBgn0038494.1 802 1111 +
Chr2	stalkie_big_nohaplotig	CDS	123347964	123348142	.	+	2	Parent=FBgn0038494.1.mrna2;Target=FBgn0038494.1 1112 1290 +
Chr2	gffcl	locus	123349249	123350828	.	.	.	ID=RLOC_00021219;geneIDs=comp117177_c0_seq1.path1,comp155175_c0_seq1.path1;transcripts=comp155175_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123349249	123350405	.	-	.	ID=comp155175_c0_seq1.mrna1;geneID=comp155175_c0_seq1.path1;Name=comp155175_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.9;matches=1134;mismatches=23;indels=38;unknowns=0;Target=comp155175_c0_seq1 1195 1 .;CDS_Target=comp155175_c0_seq1 127 2 .;locus=RLOC_00021219
Chr2	stalkie_big_nohaplotig	exon	123349249	123350405	94	-	.	Parent=comp155175_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123350280	123350404	.	-	0	Parent=comp155175_c0_seq1.mrna1
Chr2	gffcl	locus	123350873	123351895	.	-	.	ID=RLOC_00021220;geneIDs=comp154626_c0_seq1.path1;transcripts=comp154626_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123350873	123351895	.	-	.	ID=comp154626_c0_seq1.mrna1;geneID=comp154626_c0_seq1.path1;Name=comp154626_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=1007;mismatches=16;indels=0;unknowns=0;Target=comp154626_c0_seq1 1023 1 .;CDS_Target=comp154626_c0_seq1 590 351 .;locus=RLOC_00021220
Chr2	stalkie_big_nohaplotig	exon	123350873	123351895	98	-	.	Parent=comp154626_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123351306	123351545	.	-	0	Parent=comp154626_c0_seq1.mrna1
Chr2	gffcl	locus	123351986	123352709	.	+	.	ID=RLOC_00021221;geneIDs=comp157369_c0_seq1.path1;transcripts=comp157369_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123351986	123352709	.	+	.	ID=comp157369_c0_seq1.mrna1;geneID=comp157369_c0_seq1.path1;Name=comp157369_c0_seq1;Dir=indeterminatecoverage=94.8;identity=97.5;matches=712;mismatches=12;indels=6;unknowns=0;Target=comp157369_c0_seq1 757 28 .;CDS_Target=comp157369_c0_seq1 472 383 .;locus=RLOC_00021221
Chr2	stalkie_big_nohaplotig	exon	123351986	123352709	97	+	.	Parent=comp157369_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123352340	123352426	.	+	0	Parent=comp157369_c0_seq1.mrna1
Chr2	gffcl	locus	123381972	123520029	.	+	.	ID=RLOC_00021222;geneIDs=comp142696_c0_seq1.path1;transcripts=comp142696_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123381972	123520029	.	+	.	ID=comp142696_c0_seq1.mrna1;geneID=comp142696_c0_seq1.path1;Name=comp142696_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=397;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021222
Chr2	stalkie_big_nohaplotig	exon	123381972	123382102	100	+	.	Parent=comp142696_c0_seq1.mrna1;Target=comp142696_c0_seq1 269 399 -
Chr2	stalkie_big_nohaplotig	exon	123519704	123519731	96	+	.	Parent=comp142696_c0_seq1.mrna1;Target=comp142696_c0_seq1 241 268 -
Chr2	stalkie_big_nohaplotig	exon	123519790	123520029	99	+	.	Parent=comp142696_c0_seq1.mrna1;Target=comp142696_c0_seq1 1 240 -
Chr2	stalkie_big_nohaplotig	CDS	123519717	123519731	.	+	0	Parent=comp142696_c0_seq1.mrna1;Target=comp142696_c0_seq1 241 255 .
Chr2	stalkie_big_nohaplotig	CDS	123519790	123519984	.	+	0	Parent=comp142696_c0_seq1.mrna1;Target=comp142696_c0_seq1 46 240 .
Chr2	gffcl	locus	123405734	123412346	.	+	.	ID=RLOC_00021223;geneIDs=FBgn0038494.1.path1;transcripts=FBgn0038494.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123405734	123412346	.	+	.	ID=FBgn0038494.1.mrna1;geneID=FBgn0038494.1.path1;Name=FBgn0038494.1;Dir=sensecoverage=37.7;identity=100.0;matches=486;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021223
Chr2	stalkie_big_nohaplotig	exon	123405734	123405949	100	+	.	Parent=FBgn0038494.1.mrna1;Target=FBgn0038494.1 316 531 +
Chr2	stalkie_big_nohaplotig	exon	123406120	123406255	100	+	.	Parent=FBgn0038494.1.mrna1;Target=FBgn0038494.1 532 667 +
Chr2	stalkie_big_nohaplotig	exon	123412213	123412346	100	+	.	Parent=FBgn0038494.1.mrna1;Target=FBgn0038494.1 668 801 +
Chr2	stalkie_big_nohaplotig	CDS	123405734	123405949	.	+	0	Parent=FBgn0038494.1.mrna1;Target=FBgn0038494.1 316 531 +
Chr2	stalkie_big_nohaplotig	CDS	123406120	123406255	.	+	0	Parent=FBgn0038494.1.mrna1;Target=FBgn0038494.1 532 667 +
Chr2	stalkie_big_nohaplotig	CDS	123412213	123412346	.	+	2	Parent=FBgn0038494.1.mrna1;Target=FBgn0038494.1 668 801 +
Chr2	gffcl	locus	123539236	123540289	.	-	.	ID=RLOC_00021224;geneIDs=comp113780_c0_seq1.path1;transcripts=comp113780_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123539236	123540289	.	-	.	ID=comp113780_c0_seq1.mrna1;geneID=comp113780_c0_seq1.path1;Name=comp113780_c0_seq1;Dir=indeterminatecoverage=99.3;identity=97.3;matches=1027;mismatches=13;indels=16;unknowns=0;Target=comp113780_c0_seq1 1049 8 .;CDS_Target=comp113780_c0_seq1 1048 911 .;locus=RLOC_00021224
Chr2	stalkie_big_nohaplotig	exon	123539236	123540289	97	-	.	Parent=comp113780_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123539237	123539380	.	-	0	Parent=comp113780_c0_seq1.mrna1
Chr2	gffcl	locus	123556107	123556369	.	+	.	ID=RLOC_00021225;geneIDs=comp814097_c0_seq1.path1;transcripts=comp814097_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123556107	123556369	.	+	.	ID=comp814097_c0_seq1.mrna1;geneID=comp814097_c0_seq1.path1;Name=comp814097_c0_seq1;Dir=indeterminatecoverage=93.9;identity=99.2;matches=261;mismatches=2;indels=0;unknowns=0;Target=comp814097_c0_seq1 280 18 .;CDS_Target=comp814097_c0_seq1 153 19 .;locus=RLOC_00021225
Chr2	stalkie_big_nohaplotig	exon	123556107	123556369	99	+	.	Parent=comp814097_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123556108	123556242	.	+	0	Parent=comp814097_c0_seq1.mrna1
Chr2	gffcl	locus	123583374	123585203	.	+	.	ID=RLOC_00021226;geneIDs=ORF555.path1;transcripts=ORF555.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123583374	123585203	.	+	.	ID=ORF555.mrna1;geneID=ORF555.path1;Name=ORF555;Dir=sensecoverage=99.9;identity=99.8;matches=1654;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021226
Chr2	stalkie_big_nohaplotig	exon	123583374	123583606	100	+	.	Parent=ORF555.mrna1;Target=ORF555 2 234 +
Chr2	stalkie_big_nohaplotig	exon	123583663	123585055	99	+	.	Parent=ORF555.mrna1;Target=ORF555 235 1627 +
Chr2	stalkie_big_nohaplotig	exon	123585172	123585203	100	+	.	Parent=ORF555.mrna1;Target=ORF555 1628 1659 +
Chr2	stalkie_big_nohaplotig	CDS	123583376	123583606	.	+	0	Parent=ORF555.mrna1;Target=ORF555 4 234 +
Chr2	stalkie_big_nohaplotig	CDS	123583663	123585055	.	+	0	Parent=ORF555.mrna1;Target=ORF555 235 1627 +
Chr2	stalkie_big_nohaplotig	CDS	123585172	123585203	.	+	2	Parent=ORF555.mrna1;Target=ORF555 1628 1659 +
Chr2	gffcl	locus	123592091	123592422	.	+	.	ID=RLOC_00021227;geneIDs=comp93935_c0_seq1.path1;transcripts=comp93935_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123592091	123592422	.	+	.	ID=comp93935_c0_seq1.mrna1;geneID=comp93935_c0_seq1.path1;Name=comp93935_c0_seq1;Dir=indeterminatecoverage=95.4;identity=99.4;matches=330;mismatches=2;indels=0;unknowns=0;Target=comp93935_c0_seq1 333 2 .;CDS_Target=comp93935_c0_seq1 98 3 .;locus=RLOC_00021227
Chr2	stalkie_big_nohaplotig	exon	123592091	123592422	99	+	.	Parent=comp93935_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123592092	123592187	.	+	0	Parent=comp93935_c0_seq1.mrna1
Chr2	gffcl	locus	123592613	123602406	.	+	.	ID=RLOC_00021228;geneIDs=FBgn0001321.1.path1;transcripts=FBgn0001321.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123592613	123602406	.	+	.	ID=FBgn0001321.1.mrna1;geneID=FBgn0001321.1.path1;Name=FBgn0001321.1;Dir=sensecoverage=100.0;identity=100.0;matches=2208;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021228
Chr2	stalkie_big_nohaplotig	exon	123592613	123592796	100	+	.	Parent=FBgn0001321.1.mrna1;Target=FBgn0001321.1 1 184 +
Chr2	stalkie_big_nohaplotig	exon	123598449	123598519	100	+	.	Parent=FBgn0001321.1.mrna1;Target=FBgn0001321.1 185 255 +
Chr2	stalkie_big_nohaplotig	exon	123598584	123598732	100	+	.	Parent=FBgn0001321.1.mrna1;Target=FBgn0001321.1 256 404 +
Chr2	stalkie_big_nohaplotig	exon	123598801	123599148	100	+	.	Parent=FBgn0001321.1.mrna1;Target=FBgn0001321.1 405 752 +
Chr2	stalkie_big_nohaplotig	exon	123599215	123599632	100	+	.	Parent=FBgn0001321.1.mrna1;Target=FBgn0001321.1 753 1170 +
Chr2	stalkie_big_nohaplotig	exon	123599696	123599831	100	+	.	Parent=FBgn0001321.1.mrna1;Target=FBgn0001321.1 1171 1306 +
Chr2	stalkie_big_nohaplotig	exon	123599891	123600113	100	+	.	Parent=FBgn0001321.1.mrna1;Target=FBgn0001321.1 1307 1529 +
Chr2	stalkie_big_nohaplotig	exon	123600176	123600243	100	+	.	Parent=FBgn0001321.1.mrna1;Target=FBgn0001321.1 1530 1597 +
Chr2	stalkie_big_nohaplotig	exon	123601730	123601818	100	+	.	Parent=FBgn0001321.1.mrna1;Target=FBgn0001321.1 1598 1686 +
Chr2	stalkie_big_nohaplotig	exon	123601885	123602406	100	+	.	Parent=FBgn0001321.1.mrna1;Target=FBgn0001321.1 1687 2208 +
Chr2	stalkie_big_nohaplotig	CDS	123592613	123592796	.	+	0	Parent=FBgn0001321.1.mrna1;Target=FBgn0001321.1 1 184 +
Chr2	stalkie_big_nohaplotig	CDS	123598449	123598519	.	+	2	Parent=FBgn0001321.1.mrna1;Target=FBgn0001321.1 185 255 +
Chr2	stalkie_big_nohaplotig	CDS	123598584	123598732	.	+	0	Parent=FBgn0001321.1.mrna1;Target=FBgn0001321.1 256 404 +
Chr2	stalkie_big_nohaplotig	CDS	123598801	123599148	.	+	1	Parent=FBgn0001321.1.mrna1;Target=FBgn0001321.1 405 752 +
Chr2	stalkie_big_nohaplotig	CDS	123599215	123599632	.	+	1	Parent=FBgn0001321.1.mrna1;Target=FBgn0001321.1 753 1170 +
Chr2	stalkie_big_nohaplotig	CDS	123599696	123599831	.	+	0	Parent=FBgn0001321.1.mrna1;Target=FBgn0001321.1 1171 1306 +
Chr2	stalkie_big_nohaplotig	CDS	123599891	123600113	.	+	2	Parent=FBgn0001321.1.mrna1;Target=FBgn0001321.1 1307 1529 +
Chr2	stalkie_big_nohaplotig	CDS	123600176	123600243	.	+	1	Parent=FBgn0001321.1.mrna1;Target=FBgn0001321.1 1530 1597 +
Chr2	stalkie_big_nohaplotig	CDS	123601730	123601818	.	+	2	Parent=FBgn0001321.1.mrna1;Target=FBgn0001321.1 1598 1686 +
Chr2	stalkie_big_nohaplotig	CDS	123601885	123602406	.	+	0	Parent=FBgn0001321.1.mrna1;Target=FBgn0001321.1 1687 2208 +
Chr2	gffcl	locus	123618035	123619017	.	-	.	ID=RLOC_00021231;geneIDs=FBgn0038490.2.path1;transcripts=FBgn0038490.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123618035	123619017	.	-	.	ID=FBgn0038490.2.mrna1;geneID=FBgn0038490.2.path1;Name=FBgn0038490.2;Dir=sensecoverage=100.0;identity=100.0;matches=870;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021231
Chr2	stalkie_big_nohaplotig	exon	123618035	123618292	100	-	.	Parent=FBgn0038490.2.mrna1;Target=FBgn0038490.2 613 870 +
Chr2	stalkie_big_nohaplotig	exon	123618347	123618613	100	-	.	Parent=FBgn0038490.2.mrna1;Target=FBgn0038490.2 346 612 +
Chr2	stalkie_big_nohaplotig	exon	123618673	123619017	100	-	.	Parent=FBgn0038490.2.mrna1;Target=FBgn0038490.2 1 345 +
Chr2	stalkie_big_nohaplotig	CDS	123618035	123618292	.	-	0	Parent=FBgn0038490.2.mrna1;Target=FBgn0038490.2 613 870 +
Chr2	stalkie_big_nohaplotig	CDS	123618347	123618613	.	-	0	Parent=FBgn0038490.2.mrna1;Target=FBgn0038490.2 346 612 +
Chr2	stalkie_big_nohaplotig	CDS	123618673	123619017	.	-	0	Parent=FBgn0038490.2.mrna1;Target=FBgn0038490.2 1 345 +
Chr2	gffcl	locus	123625031	123625528	.	+	.	ID=RLOC_00021232;geneIDs=FBgn0038491.1.path1;transcripts=FBgn0038491.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123625031	123625528	.	+	.	ID=FBgn0038491.1.mrna1;geneID=FBgn0038491.1.path1;Name=FBgn0038491.1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=493;mismatches=5;indels=0;unknowns=0;Target=FBgn0038491.1 498 1 .;locus=RLOC_00021232
Chr2	stalkie_big_nohaplotig	exon	123625031	123625528	98	+	.	Parent=FBgn0038491.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123625031	123625528	.	+	0	Parent=FBgn0038491.1.mrna1
Chr2	gffcl	locus	123629037	123634014	.	-	.	ID=RLOC_00021233;geneIDs=FBgn0038492.1.path1;transcripts=FBgn0038492.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123629037	123634014	.	-	.	ID=FBgn0038492.1.mrna1;geneID=FBgn0038492.1.path1;Name=FBgn0038492.1;Dir=sensecoverage=100.0;identity=99.5;matches=4535;mismatches=10;indels=15;unknowns=0;locus=RLOC_00021233
Chr2	stalkie_big_nohaplotig	exon	123629037	123632290	99	-	.	Parent=FBgn0038492.1.mrna1;Target=FBgn0038492.1 1307 4560 +
Chr2	stalkie_big_nohaplotig	exon	123632354	123632953	100	-	.	Parent=FBgn0038492.1.mrna1;Target=FBgn0038492.1 707 1306 +
Chr2	stalkie_big_nohaplotig	exon	123633324	123634014	96	-	.	Parent=FBgn0038492.1.mrna1;Target=FBgn0038492.1 1 706 +
Chr2	stalkie_big_nohaplotig	CDS	123629037	123632290	.	-	2	Parent=FBgn0038492.1.mrna1;Target=FBgn0038492.1 1307 4560 +
Chr2	stalkie_big_nohaplotig	CDS	123632354	123632953	.	-	2	Parent=FBgn0038492.1.mrna1;Target=FBgn0038492.1 707 1306 +
Chr2	stalkie_big_nohaplotig	CDS	123633324	123634014	.	-	0	Parent=FBgn0038492.1.mrna1;Target=FBgn0038492.1 1 706 +
Chr2	gffcl	locus	123722220	123723065	.	-	.	ID=RLOC_00021234;geneIDs=comp149974_c0_seq1.path1;transcripts=comp149974_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123722220	123723065	.	-	.	ID=comp149974_c0_seq1.mrna1;geneID=comp149974_c0_seq1.path1;Name=comp149974_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.6;matches=829;mismatches=17;indels=3;unknowns=0;Target=comp149974_c0_seq1 851 3 .;CDS_Target=comp149974_c0_seq1 80 3 .;locus=RLOC_00021234
Chr2	stalkie_big_nohaplotig	exon	123722220	123723065	97	-	.	Parent=comp149974_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123722988	123723065	.	-	0	Parent=comp149974_c0_seq1.mrna1
Chr2	gffcl	locus	123728865	123729456	.	-	.	ID=RLOC_00021235;geneIDs=comp153084_c0_seq1.path2;transcripts=comp153084_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	123728865	123729456	.	-	.	ID=comp153084_c0_seq1.mrna2;geneID=comp153084_c0_seq1.path2;Name=comp153084_c0_seq1;Dir=sensecoverage=99.6;identity=91.8;matches=481;mismatches=13;indels=30;unknowns=0;locus=RLOC_00021235
Chr2	stalkie_big_nohaplotig	exon	123728865	123729172	88	-	.	Parent=comp153084_c0_seq1.mrna2;Target=comp153084_c0_seq1 219 496 +
Chr2	stalkie_big_nohaplotig	exon	123729241	123729456	96	-	.	Parent=comp153084_c0_seq1.mrna2;Target=comp153084_c0_seq1 3 218 +
Chr2	stalkie_big_nohaplotig	CDS	123728939	123729172	.	-	0	Parent=comp153084_c0_seq1.mrna2;Target=comp153084_c0_seq1 219 422 +
Chr2	stalkie_big_nohaplotig	CDS	123729241	123729456	.	-	0	Parent=comp153084_c0_seq1.mrna2;Target=comp153084_c0_seq1 3 218 +
Chr2	gffcl	locus	123766313	123766795	.	+	.	ID=RLOC_00021236;geneIDs=comp118152_c0_seq1.path1;transcripts=comp118152_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123766313	123766795	.	+	.	ID=comp118152_c0_seq1.mrna1;geneID=comp118152_c0_seq1.path1;Name=comp118152_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=481;mismatches=2;indels=0;unknowns=0;Target=comp118152_c0_seq1 483 1 .;CDS_Target=comp118152_c0_seq1 305 126 .;locus=RLOC_00021236
Chr2	stalkie_big_nohaplotig	exon	123766313	123766795	99	+	.	Parent=comp118152_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123766438	123766617	.	+	0	Parent=comp118152_c0_seq1.mrna1
Chr2	gffcl	locus	123766845	123771516	.	-	.	ID=RLOC_00021237;geneIDs=FBgn0037792.1.path1;transcripts=FBgn0037792.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123766845	123771516	.	-	.	ID=FBgn0037792.1.mrna1;geneID=FBgn0037792.1.path1;Name=FBgn0037792.1;Dir=sensecoverage=100.0;identity=100.0;matches=2634;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021237
Chr2	stalkie_big_nohaplotig	exon	123766845	123767378	100	-	.	Parent=FBgn0037792.1.mrna1;Target=FBgn0037792.1 2101 2634 +
Chr2	stalkie_big_nohaplotig	exon	123767506	123768591	100	-	.	Parent=FBgn0037792.1.mrna1;Target=FBgn0037792.1 1015 2100 +
Chr2	stalkie_big_nohaplotig	exon	123768646	123769122	100	-	.	Parent=FBgn0037792.1.mrna1;Target=FBgn0037792.1 538 1014 +
Chr2	stalkie_big_nohaplotig	exon	123770856	123770973	100	-	.	Parent=FBgn0037792.1.mrna1;Target=FBgn0037792.1 420 537 +
Chr2	stalkie_big_nohaplotig	exon	123771043	123771238	100	-	.	Parent=FBgn0037792.1.mrna1;Target=FBgn0037792.1 224 419 +
Chr2	stalkie_big_nohaplotig	exon	123771294	123771516	100	-	.	Parent=FBgn0037792.1.mrna1;Target=FBgn0037792.1 1 223 +
Chr2	stalkie_big_nohaplotig	CDS	123766845	123767378	.	-	0	Parent=FBgn0037792.1.mrna1;Target=FBgn0037792.1 2101 2634 +
Chr2	stalkie_big_nohaplotig	CDS	123767506	123768591	.	-	0	Parent=FBgn0037792.1.mrna1;Target=FBgn0037792.1 1015 2100 +
Chr2	stalkie_big_nohaplotig	CDS	123768646	123769122	.	-	0	Parent=FBgn0037792.1.mrna1;Target=FBgn0037792.1 538 1014 +
Chr2	stalkie_big_nohaplotig	CDS	123770856	123770973	.	-	1	Parent=FBgn0037792.1.mrna1;Target=FBgn0037792.1 420 537 +
Chr2	stalkie_big_nohaplotig	CDS	123771043	123771238	.	-	2	Parent=FBgn0037792.1.mrna1;Target=FBgn0037792.1 224 419 +
Chr2	stalkie_big_nohaplotig	CDS	123771294	123771516	.	-	0	Parent=FBgn0037792.1.mrna1;Target=FBgn0037792.1 1 223 +
Chr2	gffcl	locus	123769772	123770244	.	+	.	ID=RLOC_00021238;geneIDs=comp143935_c0_seq1.path1;transcripts=comp143935_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123769772	123770244	.	+	.	ID=comp143935_c0_seq1.mrna1;geneID=comp143935_c0_seq1.path1;Name=comp143935_c0_seq1;Dir=sensecoverage=94.5;identity=97.6;matches=406;mismatches=10;indels=0;unknowns=0;locus=RLOC_00021238
Chr2	stalkie_big_nohaplotig	exon	123769772	123769950	98	+	.	Parent=comp143935_c0_seq1.mrna1;Target=comp143935_c0_seq1 9 187 +
Chr2	stalkie_big_nohaplotig	exon	123770008	123770244	97	+	.	Parent=comp143935_c0_seq1.mrna1;Target=comp143935_c0_seq1 188 424 +
Chr2	stalkie_big_nohaplotig	CDS	123769863	123769950	.	+	0	Parent=comp143935_c0_seq1.mrna1;Target=comp143935_c0_seq1 100 187 +
Chr2	stalkie_big_nohaplotig	CDS	123770008	123770141	.	+	2	Parent=comp143935_c0_seq1.mrna1;Target=comp143935_c0_seq1 188 321 +
Chr2	stalkie_big_nohaplotig	mRNA	123784693	123787701	.	-	.	ID=comp161670_c6_seq1.mrna1;geneID=comp161670_c6_seq1.path1;Name=comp161670_c6_seq1;Dir=indeterminatecoverage=78.0;identity=100.0;matches=3009;mismatches=0;indels=0;unknowns=0;Target=comp161670_c6_seq1 3009 1 .;CDS_Target=comp161670_c6_seq1 3009 1891 .;locus=RLOC_00021240
Chr2	stalkie_big_nohaplotig	exon	123784693	123787701	100	-	.	Parent=comp161670_c6_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123784693	123785811	.	-	0	Parent=comp161670_c6_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123794309	123794597	.	-	.	ID=comp540190_c0_seq1.mrna1;geneID=comp540190_c0_seq1.path1;Name=comp540190_c0_seq1;Dir=indeterminatecoverage=98.3;identity=98.6;matches=286;mismatches=2;indels=2;unknowns=0;Target=comp540190_c0_seq1 294 6 .;CDS_Target=comp540190_c0_seq1 42 7 .;locus=RLOC_00021240
Chr2	stalkie_big_nohaplotig	exon	123794309	123794597	98	-	.	Parent=comp540190_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123794561	123794596	.	-	0	Parent=comp540190_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123803539	123806346	.	-	.	ID=FBgn0261279.1.mrna1;geneID=FBgn0261279.1.path1;Name=FBgn0261279.1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=2808;mismatches=0;indels=0;unknowns=0;Target=FBgn0261279.1 2811 4 .;locus=RLOC_00021240
Chr2	stalkie_big_nohaplotig	exon	123803539	123806346	100	-	.	Parent=FBgn0261279.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123803539	123806346	.	-	0	Parent=FBgn0261279.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123817651	123819643	.	+	.	ID=FBgn0038961.1.mrna1;geneID=FBgn0038961.1.path1;Name=FBgn0038961.1;Dir=sensecoverage=100.0;identity=100.0;matches=1701;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021240
Chr2	stalkie_big_nohaplotig	exon	123817651	123817849	100	+	.	Parent=FBgn0038961.1.mrna1;Target=FBgn0038961.1 1 199 +
Chr2	stalkie_big_nohaplotig	exon	123817905	123818600	100	+	.	Parent=FBgn0038961.1.mrna1;Target=FBgn0038961.1 200 895 +
Chr2	stalkie_big_nohaplotig	exon	123818663	123818912	100	+	.	Parent=FBgn0038961.1.mrna1;Target=FBgn0038961.1 896 1145 +
Chr2	stalkie_big_nohaplotig	exon	123818968	123819239	100	+	.	Parent=FBgn0038961.1.mrna1;Target=FBgn0038961.1 1146 1417 +
Chr2	stalkie_big_nohaplotig	exon	123819302	123819371	100	+	.	Parent=FBgn0038961.1.mrna1;Target=FBgn0038961.1 1418 1487 +
Chr2	stalkie_big_nohaplotig	exon	123819430	123819643	100	+	.	Parent=FBgn0038961.1.mrna1;Target=FBgn0038961.1 1488 1701 +
Chr2	stalkie_big_nohaplotig	CDS	123817651	123817849	.	+	0	Parent=FBgn0038961.1.mrna1;Target=FBgn0038961.1 1 199 +
Chr2	stalkie_big_nohaplotig	CDS	123817905	123818600	.	+	2	Parent=FBgn0038961.1.mrna1;Target=FBgn0038961.1 200 895 +
Chr2	stalkie_big_nohaplotig	CDS	123818663	123818912	.	+	2	Parent=FBgn0038961.1.mrna1;Target=FBgn0038961.1 896 1145 +
Chr2	stalkie_big_nohaplotig	CDS	123818968	123819239	.	+	1	Parent=FBgn0038961.1.mrna1;Target=FBgn0038961.1 1146 1417 +
Chr2	stalkie_big_nohaplotig	CDS	123819302	123819371	.	+	2	Parent=FBgn0038961.1.mrna1;Target=FBgn0038961.1 1418 1487 +
Chr2	stalkie_big_nohaplotig	CDS	123819430	123819643	.	+	1	Parent=FBgn0038961.1.mrna1;Target=FBgn0038961.1 1488 1701 +
Chr2	stalkie_big_nohaplotig	mRNA	123927953	123929187	.	+	.	ID=comp153795_c0_seq1.mrna1;geneID=comp153795_c0_seq1.path1;Name=comp153795_c0_seq1;Dir=indeterminatecoverage=98.1;identity=99.8;matches=1233;mismatches=2;indels=0;unknowns=0;Target=comp153795_c0_seq1 1235 1 .;CDS_Target=comp153795_c0_seq1 629 519 .;locus=RLOC_00021240
Chr2	stalkie_big_nohaplotig	exon	123927953	123929187	99	+	.	Parent=comp153795_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123928471	123928581	.	+	0	Parent=comp153795_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123933323	123933920	.	+	.	ID=comp135877_c0_seq1.mrna1;geneID=comp135877_c0_seq1.path1;Name=comp135877_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=594;mismatches=4;indels=0;unknowns=0;Target=comp135877_c0_seq1 598 1 .;CDS_Target=comp135877_c0_seq1 424 296 .;locus=RLOC_00021240
Chr2	stalkie_big_nohaplotig	exon	123933323	123933920	99	+	.	Parent=comp135877_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123933618	123933746	.	+	0	Parent=comp135877_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124007532	124008840	.	+	.	ID=FBgn0051223.1.mrna1;geneID=FBgn0051223.1.path1;Name=FBgn0051223.1;Dir=sensecoverage=100.0;identity=100.0;matches=1254;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021240
Chr2	stalkie_big_nohaplotig	exon	124007532	124007656	100	+	.	Parent=FBgn0051223.1.mrna1;Target=FBgn0051223.1 1 125 +
Chr2	stalkie_big_nohaplotig	exon	124007712	124008840	100	+	.	Parent=FBgn0051223.1.mrna1;Target=FBgn0051223.1 126 1254 +
Chr2	stalkie_big_nohaplotig	CDS	124007532	124007656	.	+	0	Parent=FBgn0051223.1.mrna1;Target=FBgn0051223.1 1 125 +
Chr2	stalkie_big_nohaplotig	CDS	124007712	124008840	.	+	1	Parent=FBgn0051223.1.mrna1;Target=FBgn0051223.1 126 1254 +
Chr2	gffcl	locus	123778817	123779831	.	+	.	ID=RLOC_00021241;geneIDs=comp156935_c0_seq1.path1;transcripts=comp156935_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123778817	123779831	.	+	.	ID=comp156935_c0_seq1.mrna1;geneID=comp156935_c0_seq1.path1;Name=comp156935_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1011;mismatches=3;indels=1;unknowns=0;Target=comp156935_c0_seq1 1014 1 .;CDS_Target=comp156935_c0_seq1 18 1 .;locus=RLOC_00021241
Chr2	stalkie_big_nohaplotig	exon	123778817	123779831	99	+	.	Parent=comp156935_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123778817	123778834	.	+	0	Parent=comp156935_c0_seq1.mrna1
Chr2	gffcl	locus	123780494	123788389	.	-	.	ID=RLOC_00021242;geneIDs=FBgn0038965.1.path1;transcripts=FBgn0038965.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123780494	123788389	.	-	.	ID=FBgn0038965.1.mrna1;geneID=FBgn0038965.1.path1;Name=FBgn0038965.1;Dir=sensecoverage=100.0;identity=100.0;matches=678;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021242
Chr2	stalkie_big_nohaplotig	exon	123780494	123780969	100	-	.	Parent=FBgn0038965.1.mrna1;Target=FBgn0038965.1 203 678 +
Chr2	stalkie_big_nohaplotig	exon	123781037	123781203	100	-	.	Parent=FBgn0038965.1.mrna1;Target=FBgn0038965.1 36 202 +
Chr2	stalkie_big_nohaplotig	exon	123788355	123788389	100	-	.	Parent=FBgn0038965.1.mrna1;Target=FBgn0038965.1 1 35 +
Chr2	stalkie_big_nohaplotig	CDS	123780494	123780969	.	-	2	Parent=FBgn0038965.1.mrna1;Target=FBgn0038965.1 203 678 +
Chr2	stalkie_big_nohaplotig	CDS	123781037	123781203	.	-	1	Parent=FBgn0038965.1.mrna1;Target=FBgn0038965.1 36 202 +
Chr2	stalkie_big_nohaplotig	CDS	123788355	123788389	.	-	0	Parent=FBgn0038965.1.mrna1;Target=FBgn0038965.1 1 35 +
Chr2	gffcl	locus	123791146	123792697	.	+	.	ID=RLOC_00021243;geneIDs=FBgn0038964.1.path1;transcripts=FBgn0038964.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123791146	123792697	.	+	.	ID=FBgn0038964.1.mrna1;geneID=FBgn0038964.1.path1;Name=FBgn0038964.1;Dir=sensecoverage=99.5;identity=100.0;matches=1492;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021243
Chr2	stalkie_big_nohaplotig	exon	123791146	123791549	100	+	.	Parent=FBgn0038964.1.mrna1;Target=FBgn0038964.1 9 412 +
Chr2	stalkie_big_nohaplotig	exon	123791610	123792697	100	+	.	Parent=FBgn0038964.1.mrna1;Target=FBgn0038964.1 413 1500 +
Chr2	stalkie_big_nohaplotig	CDS	123791147	123791549	.	+	0	Parent=FBgn0038964.1.mrna1;Target=FBgn0038964.1 10 412 +
Chr2	stalkie_big_nohaplotig	CDS	123791610	123792697	.	+	2	Parent=FBgn0038964.1.mrna1;Target=FBgn0038964.1 413 1500 +
Chr2	gffcl	locus	123797395	123815502	.	-	.	ID=RLOC_00021244;geneIDs=FBgn0261279.path1;transcripts=FBgn0261279.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123797395	123815502	.	-	.	ID=FBgn0261279.mrna1;geneID=FBgn0261279.path1;Name=FBgn0261279;Dir=sensecoverage=100.0;identity=100.0;matches=2028;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021244
Chr2	stalkie_big_nohaplotig	exon	123797395	123797966	100	-	.	Parent=FBgn0261279.mrna1;Target=FBgn0261279 1457 2028 +
Chr2	stalkie_big_nohaplotig	exon	123806908	123807668	100	-	.	Parent=FBgn0261279.mrna1;Target=FBgn0261279 696 1456 +
Chr2	stalkie_big_nohaplotig	exon	123807731	123807821	100	-	.	Parent=FBgn0261279.mrna1;Target=FBgn0261279 605 695 +
Chr2	stalkie_big_nohaplotig	exon	123807898	123808084	100	-	.	Parent=FBgn0261279.mrna1;Target=FBgn0261279 418 604 +
Chr2	stalkie_big_nohaplotig	exon	123808171	123808320	100	-	.	Parent=FBgn0261279.mrna1;Target=FBgn0261279 268 417 +
Chr2	stalkie_big_nohaplotig	exon	123808383	123808584	100	-	.	Parent=FBgn0261279.mrna1;Target=FBgn0261279 66 267 +
Chr2	stalkie_big_nohaplotig	exon	123815438	123815502	100	-	.	Parent=FBgn0261279.mrna1;Target=FBgn0261279 1 65 +
Chr2	stalkie_big_nohaplotig	CDS	123797395	123797966	.	-	2	Parent=FBgn0261279.mrna1;Target=FBgn0261279 1457 2028 +
Chr2	stalkie_big_nohaplotig	CDS	123806908	123807668	.	-	1	Parent=FBgn0261279.mrna1;Target=FBgn0261279 696 1456 +
Chr2	stalkie_big_nohaplotig	CDS	123807731	123807821	.	-	2	Parent=FBgn0261279.mrna1;Target=FBgn0261279 605 695 +
Chr2	stalkie_big_nohaplotig	CDS	123807898	123808084	.	-	0	Parent=FBgn0261279.mrna1;Target=FBgn0261279 418 604 +
Chr2	stalkie_big_nohaplotig	CDS	123808171	123808320	.	-	0	Parent=FBgn0261279.mrna1;Target=FBgn0261279 268 417 +
Chr2	stalkie_big_nohaplotig	CDS	123808383	123808584	.	-	1	Parent=FBgn0261279.mrna1;Target=FBgn0261279 66 267 +
Chr2	stalkie_big_nohaplotig	CDS	123815438	123815502	.	-	0	Parent=FBgn0261279.mrna1;Target=FBgn0261279 1 65 +
Chr2	gffcl	locus	123800630	123801564	.	-	.	ID=RLOC_00021245;geneIDs=comp151162_c0_seq1.path1;transcripts=comp151162_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123800630	123801564	.	-	.	ID=comp151162_c0_seq1.mrna1;geneID=comp151162_c0_seq1.path1;Name=comp151162_c0_seq1;Dir=indeterminatecoverage=98.1;identity=99.0;matches=926;mismatches=6;indels=3;unknowns=0;Target=comp151162_c0_seq1 950 19 .;CDS_Target=comp151162_c0_seq1 344 231 .;locus=RLOC_00021245
Chr2	stalkie_big_nohaplotig	exon	123800630	123801564	99	-	.	Parent=comp151162_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123801239	123801352	.	-	0	Parent=comp151162_c0_seq1.mrna1
Chr2	gffcl	locus	123825971	123842850	.	-	.	ID=RLOC_00021246;geneIDs=comp143945_c0_seq1.path1;transcripts=comp143945_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123825971	123842850	.	-	.	ID=comp143945_c0_seq1.mrna1;geneID=comp143945_c0_seq1.path1;Name=comp143945_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=1122;mismatches=0;indels=0;unknowns=0;Target=comp143945_c0_seq1 63 788 .;locus=RLOC_00021246
Chr2	stalkie_big_nohaplotig	exon	123825971	123826759	100	-	.	Parent=comp143945_c0_seq1.mrna1;Target=comp143945_c0_seq1 1 789 -
Chr2	stalkie_big_nohaplotig	exon	123842518	123842850	100	-	.	Parent=comp143945_c0_seq1.mrna1;Target=comp143945_c0_seq1 790 1122 -
Chr2	stalkie_big_nohaplotig	CDS	123826033	123826758	.	-	0	Parent=comp143945_c0_seq1.mrna1
Chr2	gffcl	locus	123879274	123886579	.	+	.	ID=RLOC_00021248;geneIDs=comp137295_c0_seq1.path1;transcripts=comp137295_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123879274	123886579	.	+	.	ID=comp137295_c0_seq1.mrna1;geneID=comp137295_c0_seq1.path1;Name=comp137295_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=289;mismatches=1;indels=0;unknowns=0;Target=comp137295_c0_seq1 141 290 +;locus=RLOC_00021248
Chr2	stalkie_big_nohaplotig	exon	123879274	123879406	99	+	.	Parent=comp137295_c0_seq1.mrna1;Target=comp137295_c0_seq1 1 133 +
Chr2	stalkie_big_nohaplotig	exon	123886423	123886579	100	+	.	Parent=comp137295_c0_seq1.mrna1;Target=comp137295_c0_seq1 134 290 +
Chr2	stalkie_big_nohaplotig	CDS	123886430	123886579	.	+	0	Parent=comp137295_c0_seq1.mrna1
Chr2	gffcl	locus	123886595	123887536	.	+	.	ID=RLOC_00021249;geneIDs=FBgn0038958.1.path1;transcripts=FBgn0038958.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123886595	123887536	.	+	.	ID=FBgn0038958.1.mrna1;geneID=FBgn0038958.1.path1;Name=FBgn0038958.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=940;mismatches=2;indels=0;unknowns=0;Target=FBgn0038958.1 942 1 .;locus=RLOC_00021249
Chr2	stalkie_big_nohaplotig	exon	123886595	123887536	99	+	.	Parent=FBgn0038958.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123886595	123887536	.	+	0	Parent=FBgn0038958.1.mrna1
Chr2	gffcl	locus	123891422	123895558	.	-	.	ID=RLOC_00021250;geneIDs=comp155096_c0_seq1.path1;transcripts=comp155096_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123891422	123895558	.	-	.	ID=comp155096_c0_seq1.mrna1;geneID=comp155096_c0_seq1.path1;Name=comp155096_c0_seq1;Dir=antisensecoverage=57.5;identity=98.9;matches=925;mismatches=3;indels=7;unknowns=0;Target=comp155096_c0_seq1 1169 1510 .;locus=RLOC_00021250
Chr2	stalkie_big_nohaplotig	exon	123891422	123891429	100	-	.	Parent=comp155096_c0_seq1.mrna1;Target=comp155096_c0_seq1 681 688 -
Chr2	stalkie_big_nohaplotig	exon	123892109	123892125	58	-	.	Parent=comp155096_c0_seq1.mrna1;Target=comp155096_c0_seq1 692 702 -
Chr2	stalkie_big_nohaplotig	exon	123894589	123895015	99	-	.	Parent=comp155096_c0_seq1.mrna1;Target=comp155096_c0_seq1 703 1130 -
Chr2	stalkie_big_nohaplotig	exon	123895077	123895558	100	-	.	Parent=comp155096_c0_seq1.mrna1;Target=comp155096_c0_seq1 1131 1612 -
Chr2	stalkie_big_nohaplotig	CDS	123895115	123895456	.	-	0	Parent=comp155096_c0_seq1.mrna1
Chr2	gffcl	locus	123896117	123897727	.	-	.	ID=RLOC_00021251;geneIDs=FBgn0038660.1.path1;transcripts=FBgn0038660.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123896117	123897727	.	-	.	ID=FBgn0038660.1.mrna1;geneID=FBgn0038660.1.path1;Name=FBgn0038660.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1611;mismatches=0;indels=0;unknowns=0;Target=FBgn0038660.1 1611 1 .;locus=RLOC_00021251
Chr2	stalkie_big_nohaplotig	exon	123896117	123897727	100	-	.	Parent=FBgn0038660.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123896117	123897727	.	-	0	Parent=FBgn0038660.1.mrna1
Chr2	gffcl	locus	123897945	123898255	.	-	.	ID=RLOC_00021252;geneIDs=comp143243_c0_seq1.path1;transcripts=comp143243_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123897945	123898255	.	-	.	ID=comp143243_c0_seq1.mrna1;geneID=comp143243_c0_seq1.path1;Name=comp143243_c0_seq1;Dir=indeterminatecoverage=96.0;identity=100.0;matches=311;mismatches=0;indels=0;unknowns=0;Target=comp143243_c0_seq1 324 14 .;CDS_Target=comp143243_c0_seq1 268 140 .;locus=RLOC_00021252
Chr2	stalkie_big_nohaplotig	exon	123897945	123898255	100	-	.	Parent=comp143243_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123898001	123898129	.	-	0	Parent=comp143243_c0_seq1.mrna1
Chr2	gffcl	locus	123931599	123932586	.	+	.	ID=RLOC_00021253;geneIDs=comp135687_c0_seq1.path1;transcripts=comp135687_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123931599	123932586	.	+	.	ID=comp135687_c0_seq1.mrna1;geneID=comp135687_c0_seq1.path1;Name=comp135687_c0_seq1;Dir=indeterminatecoverage=97.4;identity=100.0;matches=988;mismatches=0;indels=0;unknowns=0;Target=comp135687_c0_seq1 1014 27 .;CDS_Target=comp135687_c0_seq1 298 167 .;locus=RLOC_00021253
Chr2	stalkie_big_nohaplotig	exon	123931599	123932586	100	+	.	Parent=comp135687_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123931739	123931870	.	+	0	Parent=comp135687_c0_seq1.mrna1
Chr2	gffcl	locus	123935070	123935568	.	-	.	ID=RLOC_00021254;geneIDs=comp147777_c1_seq1.path1;transcripts=comp147777_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123935070	123935568	.	-	.	ID=comp147777_c1_seq1.mrna1;geneID=comp147777_c1_seq1.path1;Name=comp147777_c1_seq1;Dir=indeterminatecoverage=99.8;identity=97.6;matches=487;mismatches=11;indels=1;unknowns=0;Target=comp147777_c1_seq1 499 2 .;CDS_Target=comp147777_c1_seq1 200 75 .;locus=RLOC_00021254
Chr2	stalkie_big_nohaplotig	exon	123935070	123935568	97	-	.	Parent=comp147777_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123935369	123935494	.	-	0	Parent=comp147777_c1_seq1.mrna1
Chr2	gffcl	locus	123935833	123936335	.	-	.	ID=RLOC_00021255;geneIDs=comp147309_c0_seq1.path1;transcripts=comp147309_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123935833	123936335	.	-	.	ID=comp147309_c0_seq1.mrna1;geneID=comp147309_c0_seq1.path1;Name=comp147309_c0_seq1;Dir=indeterminatecoverage=82.5;identity=98.0;matches=493;mismatches=10;indels=0;unknowns=0;Target=comp147309_c0_seq1 503 1 .;CDS_Target=comp147309_c0_seq1 150 70 .;locus=RLOC_00021255
Chr2	stalkie_big_nohaplotig	exon	123935833	123936335	98	-	.	Parent=comp147309_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123936186	123936266	.	-	0	Parent=comp147309_c0_seq1.mrna1
Chr2	gffcl	locus	123949663	123950799	.	+	.	ID=RLOC_00021256;geneIDs=comp155846_c0_seq1.path1;transcripts=comp155846_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123949663	123950799	.	+	.	ID=comp155846_c0_seq1.mrna1;geneID=comp155846_c0_seq1.path1;Name=comp155846_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=923;mismatches=0;indels=0;unknowns=0;Target=comp155846_c0_seq1 158 502 .;locus=RLOC_00021256
Chr2	stalkie_big_nohaplotig	exon	123949663	123949957	100	+	.	Parent=comp155846_c0_seq1.mrna1;Target=comp155846_c0_seq1 629 923 -
Chr2	stalkie_big_nohaplotig	exon	123950172	123950799	100	+	.	Parent=comp155846_c0_seq1.mrna1;Target=comp155846_c0_seq1 1 628 -
Chr2	stalkie_big_nohaplotig	CDS	123950298	123950642	.	+	0	Parent=comp155846_c0_seq1.mrna1
Chr2	gffcl	locus	123953958	123962368	.	-	.	ID=RLOC_00021257;geneIDs=FBgn0038827.1.path1;transcripts=FBgn0038827.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123953958	123962368	.	-	.	ID=FBgn0038827.1.mrna1;geneID=FBgn0038827.1.path1;Name=FBgn0038827.1;Dir=sensecoverage=100.0;identity=100.0;matches=4515;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021257
Chr2	stalkie_big_nohaplotig	exon	123953958	123954131	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 4342 4515 +
Chr2	stalkie_big_nohaplotig	exon	123954196	123954363	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 4174 4341 +
Chr2	stalkie_big_nohaplotig	exon	123954436	123954585	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 4024 4173 +
Chr2	stalkie_big_nohaplotig	exon	123954655	123954847	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 3831 4023 +
Chr2	stalkie_big_nohaplotig	exon	123954913	123955132	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 3611 3830 +
Chr2	stalkie_big_nohaplotig	exon	123955718	123955921	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 3407 3610 +
Chr2	stalkie_big_nohaplotig	exon	123955992	123956169	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 3229 3406 +
Chr2	stalkie_big_nohaplotig	exon	123956418	123956676	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 2970 3228 +
Chr2	stalkie_big_nohaplotig	exon	123956746	123956959	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 2756 2969 +
Chr2	stalkie_big_nohaplotig	exon	123957259	123957400	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 2614 2755 +
Chr2	stalkie_big_nohaplotig	exon	123957457	123957736	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 2334 2613 +
Chr2	stalkie_big_nohaplotig	exon	123957797	123957913	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 2217 2333 +
Chr2	stalkie_big_nohaplotig	exon	123957974	123958178	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 2012 2216 +
Chr2	stalkie_big_nohaplotig	exon	123958300	123958454	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 1857 2011 +
Chr2	stalkie_big_nohaplotig	exon	123958513	123958676	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 1693 1856 +
Chr2	stalkie_big_nohaplotig	exon	123959304	123959472	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 1524 1692 +
Chr2	stalkie_big_nohaplotig	exon	123959543	123959712	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 1354 1523 +
Chr2	stalkie_big_nohaplotig	exon	123959819	123959891	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 1281 1353 +
Chr2	stalkie_big_nohaplotig	exon	123960674	123960837	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 1117 1280 +
Chr2	stalkie_big_nohaplotig	exon	123960896	123960964	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 1048 1116 +
Chr2	stalkie_big_nohaplotig	exon	123961073	123961214	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 906 1047 +
Chr2	stalkie_big_nohaplotig	exon	123961269	123961478	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 696 905 +
Chr2	stalkie_big_nohaplotig	exon	123961540	123961825	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 410 695 +
Chr2	stalkie_big_nohaplotig	exon	123961888	123962158	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 139 409 +
Chr2	stalkie_big_nohaplotig	exon	123962231	123962368	100	-	.	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 1 138 +
Chr2	stalkie_big_nohaplotig	CDS	123953958	123954131	.	-	0	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 4342 4515 +
Chr2	stalkie_big_nohaplotig	CDS	123954196	123954363	.	-	0	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 4174 4341 +
Chr2	stalkie_big_nohaplotig	CDS	123954436	123954585	.	-	0	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 4024 4173 +
Chr2	stalkie_big_nohaplotig	CDS	123954655	123954847	.	-	1	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 3831 4023 +
Chr2	stalkie_big_nohaplotig	CDS	123954913	123955132	.	-	2	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 3611 3830 +
Chr2	stalkie_big_nohaplotig	CDS	123955718	123955921	.	-	2	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 3407 3610 +
Chr2	stalkie_big_nohaplotig	CDS	123955992	123956169	.	-	0	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 3229 3406 +
Chr2	stalkie_big_nohaplotig	CDS	123956418	123956676	.	-	1	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 2970 3228 +
Chr2	stalkie_big_nohaplotig	CDS	123956746	123956959	.	-	2	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 2756 2969 +
Chr2	stalkie_big_nohaplotig	CDS	123957259	123957400	.	-	0	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 2614 2755 +
Chr2	stalkie_big_nohaplotig	CDS	123957457	123957736	.	-	1	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 2334 2613 +
Chr2	stalkie_big_nohaplotig	CDS	123957797	123957913	.	-	1	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 2217 2333 +
Chr2	stalkie_big_nohaplotig	CDS	123957974	123958178	.	-	2	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 2012 2216 +
Chr2	stalkie_big_nohaplotig	CDS	123958300	123958454	.	-	1	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 1857 2011 +
Chr2	stalkie_big_nohaplotig	CDS	123958513	123958676	.	-	0	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 1693 1856 +
Chr2	stalkie_big_nohaplotig	CDS	123959304	123959472	.	-	1	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 1524 1692 +
Chr2	stalkie_big_nohaplotig	CDS	123959543	123959712	.	-	0	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 1354 1523 +
Chr2	stalkie_big_nohaplotig	CDS	123959819	123959891	.	-	1	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 1281 1353 +
Chr2	stalkie_big_nohaplotig	CDS	123960674	123960837	.	-	0	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 1117 1280 +
Chr2	stalkie_big_nohaplotig	CDS	123960896	123960964	.	-	0	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 1048 1116 +
Chr2	stalkie_big_nohaplotig	CDS	123961073	123961214	.	-	1	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 906 1047 +
Chr2	stalkie_big_nohaplotig	CDS	123961269	123961478	.	-	1	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 696 905 +
Chr2	stalkie_big_nohaplotig	CDS	123961540	123961825	.	-	2	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 410 695 +
Chr2	stalkie_big_nohaplotig	CDS	123961888	123962158	.	-	0	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 139 409 +
Chr2	stalkie_big_nohaplotig	CDS	123962231	123962368	.	-	0	Parent=FBgn0038827.1.mrna1;Target=FBgn0038827.1 1 138 +
Chr2	gffcl	locus	123964767	123965494	.	-	.	ID=RLOC_00021258;geneIDs=FBgn0038828.1.path1;transcripts=FBgn0038828.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123964767	123965494	.	-	.	ID=FBgn0038828.1.mrna1;geneID=FBgn0038828.1.path1;Name=FBgn0038828.1;Dir=sensecoverage=100.0;identity=100.0;matches=531;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021258
Chr2	stalkie_big_nohaplotig	exon	123964767	123964906	100	-	.	Parent=FBgn0038828.1.mrna1;Target=FBgn0038828.1 392 531 +
Chr2	stalkie_big_nohaplotig	exon	123964972	123965090	100	-	.	Parent=FBgn0038828.1.mrna1;Target=FBgn0038828.1 273 391 +
Chr2	stalkie_big_nohaplotig	exon	123965170	123965260	100	-	.	Parent=FBgn0038828.1.mrna1;Target=FBgn0038828.1 182 272 +
Chr2	stalkie_big_nohaplotig	exon	123965314	123965494	100	-	.	Parent=FBgn0038828.1.mrna1;Target=FBgn0038828.1 1 181 +
Chr2	stalkie_big_nohaplotig	CDS	123964767	123964906	.	-	2	Parent=FBgn0038828.1.mrna1;Target=FBgn0038828.1 392 531 +
Chr2	stalkie_big_nohaplotig	CDS	123964972	123965090	.	-	1	Parent=FBgn0038828.1.mrna1;Target=FBgn0038828.1 273 391 +
Chr2	stalkie_big_nohaplotig	CDS	123965170	123965260	.	-	2	Parent=FBgn0038828.1.mrna1;Target=FBgn0038828.1 182 272 +
Chr2	stalkie_big_nohaplotig	CDS	123965314	123965494	.	-	0	Parent=FBgn0038828.1.mrna1;Target=FBgn0038828.1 1 181 +
Chr2	gffcl	locus	123974976	123975763	.	+	.	ID=RLOC_00021259;geneIDs=FBgn0038830.1.path1;transcripts=FBgn0038830.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123974976	123975763	.	+	.	ID=FBgn0038830.1.mrna1;geneID=FBgn0038830.1.path1;Name=FBgn0038830.1;Dir=sensecoverage=100.0;identity=100.0;matches=456;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021259
Chr2	stalkie_big_nohaplotig	exon	123974976	123974987	100	+	.	Parent=FBgn0038830.1.mrna1;Target=FBgn0038830.1 1 12 +
Chr2	stalkie_big_nohaplotig	exon	123975137	123975167	100	+	.	Parent=FBgn0038830.1.mrna1;Target=FBgn0038830.1 13 43 +
Chr2	stalkie_big_nohaplotig	exon	123975287	123975600	100	+	.	Parent=FBgn0038830.1.mrna1;Target=FBgn0038830.1 44 357 +
Chr2	stalkie_big_nohaplotig	exon	123975665	123975763	100	+	.	Parent=FBgn0038830.1.mrna1;Target=FBgn0038830.1 358 456 +
Chr2	stalkie_big_nohaplotig	CDS	123974976	123974987	.	+	0	Parent=FBgn0038830.1.mrna1;Target=FBgn0038830.1 1 12 +
Chr2	stalkie_big_nohaplotig	CDS	123975137	123975167	.	+	0	Parent=FBgn0038830.1.mrna1;Target=FBgn0038830.1 13 43 +
Chr2	stalkie_big_nohaplotig	CDS	123975287	123975600	.	+	2	Parent=FBgn0038830.1.mrna1;Target=FBgn0038830.1 44 357 +
Chr2	stalkie_big_nohaplotig	CDS	123975665	123975763	.	+	0	Parent=FBgn0038830.1.mrna1;Target=FBgn0038830.1 358 456 +
Chr2	gffcl	locus	123975950	123976959	.	.	.	ID=RLOC_00021260;geneIDs=FBgn0019936.2.path1,comp143959_c1_seq1.path1,comp175546_c0_seq1.path1;transcripts=FBgn0019936.2.mrna1,comp175546_c0_seq1.mrna1,comp143959_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123975950	123976959	.	-	.	ID=FBgn0019936.2.mrna1;geneID=FBgn0019936.2.path1;Name=FBgn0019936.2;Dir=sensecoverage=100.0;identity=100.0;matches=384;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021260
Chr2	stalkie_big_nohaplotig	exon	123975950	123976060	100	-	.	Parent=FBgn0019936.2.mrna1;Target=FBgn0019936.2 274 384 +
Chr2	stalkie_big_nohaplotig	exon	123976281	123976370	100	-	.	Parent=FBgn0019936.2.mrna1;Target=FBgn0019936.2 184 273 +
Chr2	stalkie_big_nohaplotig	exon	123976650	123976805	100	-	.	Parent=FBgn0019936.2.mrna1;Target=FBgn0019936.2 28 183 +
Chr2	stalkie_big_nohaplotig	exon	123976933	123976959	100	-	.	Parent=FBgn0019936.2.mrna1;Target=FBgn0019936.2 1 27 +
Chr2	stalkie_big_nohaplotig	CDS	123975950	123976060	.	-	0	Parent=FBgn0019936.2.mrna1;Target=FBgn0019936.2 274 384 +
Chr2	stalkie_big_nohaplotig	CDS	123976281	123976370	.	-	0	Parent=FBgn0019936.2.mrna1;Target=FBgn0019936.2 184 273 +
Chr2	stalkie_big_nohaplotig	CDS	123976650	123976805	.	-	0	Parent=FBgn0019936.2.mrna1;Target=FBgn0019936.2 28 183 +
Chr2	stalkie_big_nohaplotig	CDS	123976933	123976959	.	-	0	Parent=FBgn0019936.2.mrna1;Target=FBgn0019936.2 1 27 +
Chr2	stalkie_big_nohaplotig	mRNA	123975991	123976304	.	+	.	ID=comp175546_c0_seq1.mrna1;geneID=comp175546_c0_seq1.path1;Name=comp175546_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=312;mismatches=2;indels=0;unknowns=0;Target=comp175546_c0_seq1 314 1 .;CDS_Target=comp175546_c0_seq1 244 164 .;locus=RLOC_00021260
Chr2	stalkie_big_nohaplotig	exon	123975991	123976304	99	+	.	Parent=comp175546_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123976154	123976234	.	+	0	Parent=comp175546_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123976350	123976672	.	-	.	ID=comp143959_c1_seq1.mrna1;geneID=comp143959_c1_seq1.path1;Name=comp143959_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=322;mismatches=1;indels=0;unknowns=0;Target=comp143959_c1_seq1 323 1 .;CDS_Target=comp143959_c1_seq1 92 3 .;locus=RLOC_00021260
Chr2	stalkie_big_nohaplotig	exon	123976350	123976672	99	-	.	Parent=comp143959_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123976581	123976670	.	-	0	Parent=comp143959_c1_seq1.mrna1
Chr2	gffcl	locus	123979388	123980749	.	+	.	ID=RLOC_00021261;geneIDs=FBgn0004419.1.path1;transcripts=FBgn0004419.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123979388	123980749	.	+	.	ID=FBgn0004419.1.mrna1;geneID=FBgn0004419.1.path1;Name=FBgn0004419.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1361;mismatches=1;indels=0;unknowns=0;Target=FBgn0004419.1 1362 1 .;locus=RLOC_00021261
Chr2	stalkie_big_nohaplotig	exon	123979388	123980749	99	+	.	Parent=FBgn0004419.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	123979388	123980749	.	+	0	Parent=FBgn0004419.1.mrna1
Chr2	gffcl	locus	123987615	124007215	.	-	.	ID=RLOC_00021262;geneIDs=FBgn0027493.1.path1;transcripts=FBgn0027493.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	123987615	124007215	.	-	.	ID=FBgn0027493.1.mrna1;geneID=FBgn0027493.1.path1;Name=FBgn0027493.1;Dir=sensecoverage=100.0;identity=100.0;matches=1413;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021262
Chr2	stalkie_big_nohaplotig	exon	123987615	123987855	100	-	.	Parent=FBgn0027493.1.mrna1;Target=FBgn0027493.1 1173 1413 +
Chr2	stalkie_big_nohaplotig	exon	123987924	123988108	100	-	.	Parent=FBgn0027493.1.mrna1;Target=FBgn0027493.1 988 1172 +
Chr2	stalkie_big_nohaplotig	exon	123988176	123988536	100	-	.	Parent=FBgn0027493.1.mrna1;Target=FBgn0027493.1 627 987 +
Chr2	stalkie_big_nohaplotig	exon	123988610	123988889	100	-	.	Parent=FBgn0027493.1.mrna1;Target=FBgn0027493.1 347 626 +
Chr2	stalkie_big_nohaplotig	exon	124001714	124001816	100	-	.	Parent=FBgn0027493.1.mrna1;Target=FBgn0027493.1 244 346 +
Chr2	stalkie_big_nohaplotig	exon	124006973	124007215	100	-	.	Parent=FBgn0027493.1.mrna1;Target=FBgn0027493.1 1 243 +
Chr2	stalkie_big_nohaplotig	CDS	123987615	123987855	.	-	1	Parent=FBgn0027493.1.mrna1;Target=FBgn0027493.1 1173 1413 +
Chr2	stalkie_big_nohaplotig	CDS	123987924	123988108	.	-	0	Parent=FBgn0027493.1.mrna1;Target=FBgn0027493.1 988 1172 +
Chr2	stalkie_big_nohaplotig	CDS	123988176	123988536	.	-	1	Parent=FBgn0027493.1.mrna1;Target=FBgn0027493.1 627 987 +
Chr2	stalkie_big_nohaplotig	CDS	123988610	123988889	.	-	2	Parent=FBgn0027493.1.mrna1;Target=FBgn0027493.1 347 626 +
Chr2	stalkie_big_nohaplotig	CDS	124001714	124001816	.	-	0	Parent=FBgn0027493.1.mrna1;Target=FBgn0027493.1 244 346 +
Chr2	stalkie_big_nohaplotig	CDS	124006973	124007215	.	-	0	Parent=FBgn0027493.1.mrna1;Target=FBgn0027493.1 1 243 +
Chr2	gffcl	locus	124018166	124019991	.	+	.	ID=RLOC_00021263;geneIDs=comp138138_c0_seq1.path1;transcripts=comp138138_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124018166	124019991	.	+	.	ID=comp138138_c0_seq1.mrna1;geneID=comp138138_c0_seq1.path1;Name=comp138138_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=887;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021263
Chr2	stalkie_big_nohaplotig	exon	124018166	124018719	100	+	.	Parent=comp138138_c0_seq1.mrna1;Target=comp138138_c0_seq1 1 554 +
Chr2	stalkie_big_nohaplotig	exon	124019659	124019991	100	+	.	Parent=comp138138_c0_seq1.mrna1;Target=comp138138_c0_seq1 555 887 +
Chr2	stalkie_big_nohaplotig	CDS	124018647	124018719	.	+	0	Parent=comp138138_c0_seq1.mrna1;Target=comp138138_c0_seq1 482 554 +
Chr2	stalkie_big_nohaplotig	CDS	124019659	124019969	.	+	2	Parent=comp138138_c0_seq1.mrna1;Target=comp138138_c0_seq1 555 865 +
Chr2	gffcl	locus	124024021	124025448	.	+	.	ID=RLOC_00021264;geneIDs=comp147467_c0_seq1.path1;transcripts=comp147467_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124024021	124025448	.	+	.	ID=comp147467_c0_seq1.mrna1;geneID=comp147467_c0_seq1.path1;Name=comp147467_c0_seq1;Dir=sensecoverage=99.5;identity=99.9;matches=955;mismatches=0;indels=1;unknowns=0;locus=RLOC_00021264
Chr2	stalkie_big_nohaplotig	exon	124024021	124024184	100	+	.	Parent=comp147467_c0_seq1.mrna1;Target=comp147467_c0_seq1 1 164 +
Chr2	stalkie_big_nohaplotig	exon	124024239	124024498	100	+	.	Parent=comp147467_c0_seq1.mrna1;Target=comp147467_c0_seq1 165 424 +
Chr2	stalkie_big_nohaplotig	exon	124024860	124025025	100	+	.	Parent=comp147467_c0_seq1.mrna1;Target=comp147467_c0_seq1 425 590 +
Chr2	stalkie_big_nohaplotig	exon	124025084	124025448	99	+	.	Parent=comp147467_c0_seq1.mrna1;Target=comp147467_c0_seq1 591 956 +
Chr2	stalkie_big_nohaplotig	CDS	124024124	124024184	.	+	0	Parent=comp147467_c0_seq1.mrna1;Target=comp147467_c0_seq1 104 164 +
Chr2	stalkie_big_nohaplotig	CDS	124024239	124024498	.	+	2	Parent=comp147467_c0_seq1.mrna1;Target=comp147467_c0_seq1 165 424 +
Chr2	stalkie_big_nohaplotig	CDS	124024860	124025025	.	+	0	Parent=comp147467_c0_seq1.mrna1;Target=comp147467_c0_seq1 425 590 +
Chr2	stalkie_big_nohaplotig	CDS	124025084	124025196	.	+	2	Parent=comp147467_c0_seq1.mrna1;Target=comp147467_c0_seq1 591 703 +
Chr2	gffcl	locus	124024478	124024897	.	-	.	ID=RLOC_00021265;geneIDs=comp105260_c0_seq1.path1;transcripts=comp105260_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124024478	124024897	.	-	.	ID=comp105260_c0_seq1.mrna1;geneID=comp105260_c0_seq1.path1;Name=comp105260_c0_seq1;Dir=antisensecoverage=100.0;identity=99.2;matches=241;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021265
Chr2	stalkie_big_nohaplotig	exon	124024478	124024611	100	-	.	Parent=comp105260_c0_seq1.mrna1;Target=comp105260_c0_seq1 1 134 -
Chr2	stalkie_big_nohaplotig	exon	124024789	124024897	98	-	.	Parent=comp105260_c0_seq1.mrna1;Target=comp105260_c0_seq1 135 243 -
Chr2	stalkie_big_nohaplotig	CDS	124024609	124024611	.	-	0	Parent=comp105260_c0_seq1.mrna1;Target=comp105260_c0_seq1 132 134 .
Chr2	stalkie_big_nohaplotig	CDS	124024789	124024815	.	-	0	Parent=comp105260_c0_seq1.mrna1;Target=comp105260_c0_seq1 135 161 .
Chr2	gffcl	locus	124039401	124041774	.	.	.	ID=RLOC_00021267;geneIDs=comp160105_c2_seq1.path1,comp161487_c1_seq1.path1;transcripts=comp160105_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124039401	124040395	.	+	.	ID=comp160105_c2_seq1.mrna1;geneID=comp160105_c2_seq1.path1;Name=comp160105_c2_seq1;Dir=sensecoverage=98.6;identity=100.0;matches=937;mismatches=0;indels=0;unknowns=0;Target=comp160105_c2_seq1 252 743 +;locus=RLOC_00021267
Chr2	stalkie_big_nohaplotig	exon	124039401	124039542	100	+	.	Parent=comp160105_c2_seq1.mrna1;Target=comp160105_c2_seq1 1 142 +
Chr2	stalkie_big_nohaplotig	exon	124039601	124040395	100	+	.	Parent=comp160105_c2_seq1.mrna1;Target=comp160105_c2_seq1 143 937 +
Chr2	stalkie_big_nohaplotig	CDS	124039710	124040201	.	+	0	Parent=comp160105_c2_seq1.mrna1
Chr2	gffcl	locus	124044050	124044264	.	+	.	ID=RLOC_00021268;geneIDs=comp681033_c0_seq1.path1;transcripts=comp681033_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124044050	124044264	.	+	.	ID=comp681033_c0_seq1.mrna1;geneID=comp681033_c0_seq1.path1;Name=comp681033_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=215;mismatches=0;indels=0;unknowns=0;Target=comp681033_c0_seq1 215 1 .;CDS_Target=comp681033_c0_seq1 38 3 .;locus=RLOC_00021268
Chr2	stalkie_big_nohaplotig	exon	124044050	124044264	100	+	.	Parent=comp681033_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	124044052	124044087	.	+	0	Parent=comp681033_c0_seq1.mrna1
Chr2	gffcl	locus	124046054	124046688	.	+	.	ID=RLOC_00021269;geneIDs=comp136023_c0_seq1.path1;transcripts=comp136023_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124046054	124046688	.	+	.	ID=comp136023_c0_seq1.mrna1;geneID=comp136023_c0_seq1.path1;Name=comp136023_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=457;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021269
Chr2	stalkie_big_nohaplotig	exon	124046054	124046181	100	+	.	Parent=comp136023_c0_seq1.mrna1;Target=comp136023_c0_seq1 1 128 +
Chr2	stalkie_big_nohaplotig	exon	124046301	124046444	100	+	.	Parent=comp136023_c0_seq1.mrna1;Target=comp136023_c0_seq1 129 272 +
Chr2	stalkie_big_nohaplotig	exon	124046504	124046688	100	+	.	Parent=comp136023_c0_seq1.mrna1;Target=comp136023_c0_seq1 273 457 +
Chr2	stalkie_big_nohaplotig	CDS	124046321	124046444	.	+	0	Parent=comp136023_c0_seq1.mrna1;Target=comp136023_c0_seq1 149 272 +
Chr2	stalkie_big_nohaplotig	CDS	124046504	124046688	.	+	2	Parent=comp136023_c0_seq1.mrna1;Target=comp136023_c0_seq1 273 457 +
Chr2	gffcl	locus	124054474	124055002	.	-	.	ID=RLOC_00021270;geneIDs=comp146062_c1_seq1.path1;transcripts=comp146062_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124054474	124055002	.	-	.	ID=comp146062_c1_seq1.mrna1;geneID=comp146062_c1_seq1.path1;Name=comp146062_c1_seq1;Dir=indeterminatecoverage=97.6;identity=99.8;matches=528;mismatches=1;indels=0;unknowns=0;Target=comp146062_c1_seq1 529 1 .;CDS_Target=comp146062_c1_seq1 360 1 .;locus=RLOC_00021270
Chr2	stalkie_big_nohaplotig	exon	124054474	124055002	99	-	.	Parent=comp146062_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	124054643	124055002	.	-	0	Parent=comp146062_c1_seq1.mrna1
Chr2	gffcl	locus	124063382	124070988	.	-	.	ID=RLOC_00021271;geneIDs=FBgn0037536.1.path1;transcripts=FBgn0037536.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124063382	124070988	.	-	.	ID=FBgn0037536.1.mrna1;geneID=FBgn0037536.1.path1;Name=FBgn0037536.1;Dir=sensecoverage=100.0;identity=100.0;matches=2924;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021271
Chr2	stalkie_big_nohaplotig	exon	124063382	124063901	99	-	.	Parent=FBgn0037536.1.mrna1;Target=FBgn0037536.1 2406 2925 +
Chr2	stalkie_big_nohaplotig	exon	124066588	124066740	100	-	.	Parent=FBgn0037536.1.mrna1;Target=FBgn0037536.1 2253 2405 +
Chr2	stalkie_big_nohaplotig	exon	124067117	124067526	100	-	.	Parent=FBgn0037536.1.mrna1;Target=FBgn0037536.1 1843 2252 +
Chr2	stalkie_big_nohaplotig	exon	124067594	124067784	100	-	.	Parent=FBgn0037536.1.mrna1;Target=FBgn0037536.1 1652 1842 +
Chr2	stalkie_big_nohaplotig	exon	124069202	124069742	100	-	.	Parent=FBgn0037536.1.mrna1;Target=FBgn0037536.1 1111 1651 +
Chr2	stalkie_big_nohaplotig	exon	124069813	124070391	100	-	.	Parent=FBgn0037536.1.mrna1;Target=FBgn0037536.1 532 1110 +
Chr2	stalkie_big_nohaplotig	exon	124070458	124070988	100	-	.	Parent=FBgn0037536.1.mrna1;Target=FBgn0037536.1 1 531 +
Chr2	stalkie_big_nohaplotig	CDS	124063382	124063901	.	-	1	Parent=FBgn0037536.1.mrna1;Target=FBgn0037536.1 2406 2925 +
Chr2	stalkie_big_nohaplotig	CDS	124066588	124066740	.	-	1	Parent=FBgn0037536.1.mrna1;Target=FBgn0037536.1 2253 2405 +
Chr2	stalkie_big_nohaplotig	CDS	124067117	124067526	.	-	0	Parent=FBgn0037536.1.mrna1;Target=FBgn0037536.1 1843 2252 +
Chr2	stalkie_big_nohaplotig	CDS	124067594	124067784	.	-	2	Parent=FBgn0037536.1.mrna1;Target=FBgn0037536.1 1652 1842 +
Chr2	stalkie_big_nohaplotig	CDS	124069202	124069742	.	-	0	Parent=FBgn0037536.1.mrna1;Target=FBgn0037536.1 1111 1651 +
Chr2	stalkie_big_nohaplotig	CDS	124069813	124070391	.	-	0	Parent=FBgn0037536.1.mrna1;Target=FBgn0037536.1 532 1110 +
Chr2	stalkie_big_nohaplotig	CDS	124070458	124070988	.	-	0	Parent=FBgn0037536.1.mrna1;Target=FBgn0037536.1 1 531 +
Chr2	gffcl	locus	124064265	124065268	.	+	.	ID=RLOC_00021272;geneIDs=comp153784_c0_seq1.path1;transcripts=comp153784_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124064265	124065268	.	+	.	ID=comp153784_c0_seq1.mrna1;geneID=comp153784_c0_seq1.path1;Name=comp153784_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=989;mismatches=14;indels=5;unknowns=0;Target=comp153784_c0_seq1 1007 1 .;CDS_Target=comp153784_c0_seq1 736 659 .;locus=RLOC_00021272
Chr2	stalkie_big_nohaplotig	exon	124064265	124065268	98	+	.	Parent=comp153784_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	124064920	124064997	.	+	0	Parent=comp153784_c0_seq1.mrna1
Chr2	gffcl	locus	124074485	124075295	.	-	.	ID=RLOC_00021273;geneIDs=FBgn0037535.1.path1;transcripts=FBgn0037535.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124074485	124075295	.	-	.	ID=FBgn0037535.1.mrna1;geneID=FBgn0037535.1.path1;Name=FBgn0037535.1;Dir=sensecoverage=100.0;identity=99.2;matches=640;mismatches=5;indels=0;unknowns=0;locus=RLOC_00021273
Chr2	stalkie_big_nohaplotig	exon	124074485	124074562	98	-	.	Parent=FBgn0037535.1.mrna1;Target=FBgn0037535.1 568 645 +
Chr2	stalkie_big_nohaplotig	exon	124074614	124074691	100	-	.	Parent=FBgn0037535.1.mrna1;Target=FBgn0037535.1 490 567 +
Chr2	stalkie_big_nohaplotig	exon	124074752	124074879	100	-	.	Parent=FBgn0037535.1.mrna1;Target=FBgn0037535.1 362 489 +
Chr2	stalkie_big_nohaplotig	exon	124074935	124075295	98	-	.	Parent=FBgn0037535.1.mrna1;Target=FBgn0037535.1 1 361 +
Chr2	stalkie_big_nohaplotig	CDS	124074485	124074562	.	-	0	Parent=FBgn0037535.1.mrna1;Target=FBgn0037535.1 568 645 +
Chr2	stalkie_big_nohaplotig	CDS	124074614	124074691	.	-	0	Parent=FBgn0037535.1.mrna1;Target=FBgn0037535.1 490 567 +
Chr2	stalkie_big_nohaplotig	CDS	124074752	124074879	.	-	2	Parent=FBgn0037535.1.mrna1;Target=FBgn0037535.1 362 489 +
Chr2	stalkie_big_nohaplotig	CDS	124074935	124075295	.	-	0	Parent=FBgn0037535.1.mrna1;Target=FBgn0037535.1 1 361 +
Chr2	gffcl	locus	124082208	124083219	.	-	.	ID=RLOC_00021274;geneIDs=comp157245_c2_seq1.path1;transcripts=comp157245_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124082208	124083219	.	-	.	ID=comp157245_c2_seq1.mrna1;geneID=comp157245_c2_seq1.path1;Name=comp157245_c2_seq1;Dir=indeterminatecoverage=91.6;identity=98.9;matches=1001;mismatches=8;indels=3;unknowns=0;Target=comp157245_c2_seq1 1051 43 .;CDS_Target=comp157245_c2_seq1 514 44 .;locus=RLOC_00021274
Chr2	stalkie_big_nohaplotig	exon	124082208	124083219	98	-	.	Parent=comp157245_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	124082745	124083218	.	-	0	Parent=comp157245_c2_seq1.mrna1
Chr2	gffcl	locus	124092284	124119042	.	-	.	ID=RLOC_00021275;geneIDs=comp149761_c0_seq1.path1;transcripts=comp149761_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124092284	124119042	.	-	.	ID=comp149761_c0_seq1.mrna1;geneID=comp149761_c0_seq1.path1;Name=comp149761_c0_seq1;Dir=indeterminatecoverage=99.4;identity=86.0;matches=772;mismatches=62;indels=64;unknowns=0;Target=comp149761_c0_seq1 994 869 .;locus=RLOC_00021275
Chr2	stalkie_big_nohaplotig	exon	124092284	124092817	100	-	.	Parent=comp149761_c0_seq1.mrna1;Target=comp149761_c0_seq1 1088 555 .
Chr2	stalkie_big_nohaplotig	exon	124098821	124098825	100	-	.	Parent=comp149761_c0_seq1.mrna1;Target=comp149761_c0_seq1 554 550 .
Chr2	stalkie_big_nohaplotig	exon	124099302	124099325	45	-	.	Parent=comp149761_c0_seq1.mrna1;Target=comp149761_c0_seq1 549 506 .
Chr2	stalkie_big_nohaplotig	exon	124101433	124101441	88	-	.	Parent=comp149761_c0_seq1.mrna1;Target=comp149761_c0_seq1 505 497 .
Chr2	stalkie_big_nohaplotig	exon	124101929	124101936	100	-	.	Parent=comp149761_c0_seq1.mrna1;Target=comp149761_c0_seq1 496 489 .
Chr2	stalkie_big_nohaplotig	exon	124102146	124102151	100	-	.	Parent=comp149761_c0_seq1.mrna1;Target=comp149761_c0_seq1 488 483 .
Chr2	stalkie_big_nohaplotig	exon	124103596	124103600	100	-	.	Parent=comp149761_c0_seq1.mrna1;Target=comp149761_c0_seq1 482 478 .
Chr2	stalkie_big_nohaplotig	exon	124104897	124105055	55	-	.	Parent=comp149761_c0_seq1.mrna1;Target=comp149761_c0_seq1 477 299 .
Chr2	stalkie_big_nohaplotig	exon	124108764	124108774	100	-	.	Parent=comp149761_c0_seq1.mrna1;Target=comp149761_c0_seq1 234 224 .
Chr2	stalkie_big_nohaplotig	exon	124109490	124109493	100	-	.	Parent=comp149761_c0_seq1.mrna1;Target=comp149761_c0_seq1 223 220 .
Chr2	stalkie_big_nohaplotig	exon	124116970	124116978	100	-	.	Parent=comp149761_c0_seq1.mrna1;Target=comp149761_c0_seq1 134 126 .
Chr2	stalkie_big_nohaplotig	exon	124116982	124116992	100	-	.	Parent=comp149761_c0_seq1.mrna1;Target=comp149761_c0_seq1 83 73 .
Chr2	stalkie_big_nohaplotig	exon	124118172	124118205	60	-	.	Parent=comp149761_c0_seq1.mrna1;Target=comp149761_c0_seq1 72 27 .
Chr2	stalkie_big_nohaplotig	exon	124118434	124118435	100	-	.	Parent=comp149761_c0_seq1.mrna1;Target=comp149761_c0_seq1 26 25 .
Chr2	stalkie_big_nohaplotig	exon	124119026	124119042	100	-	.	Parent=comp149761_c0_seq1.mrna1;Target=comp149761_c0_seq1 24 8 .
Chr2	stalkie_big_nohaplotig	CDS	124092378	124092503	.	-	0	Parent=comp149761_c0_seq1.mrna1
Chr2	gffcl	locus	124092919	124093333	.	+	.	ID=RLOC_00021276;geneIDs=comp117352_c0_seq1.path1;transcripts=comp117352_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124092919	124093333	.	+	.	ID=comp117352_c0_seq1.mrna1;geneID=comp117352_c0_seq1.path1;Name=comp117352_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=415;mismatches=0;indels=0;unknowns=0;Target=comp117352_c0_seq1 415 1 .;CDS_Target=comp117352_c0_seq1 298 203 .;locus=RLOC_00021276
Chr2	stalkie_big_nohaplotig	exon	124092919	124093333	100	+	.	Parent=comp117352_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	124093121	124093216	.	+	0	Parent=comp117352_c0_seq1.mrna1
Chr2	gffcl	locus	124095327	124096544	.	+	.	ID=RLOC_00021277;geneIDs=FBgn0038170.1.path1;transcripts=FBgn0038170.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124095327	124096544	.	+	.	ID=FBgn0038170.1.mrna1;geneID=FBgn0038170.1.path1;Name=FBgn0038170.1;Dir=sensecoverage=100.0;identity=99.7;matches=948;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021277
Chr2	stalkie_big_nohaplotig	exon	124095327	124095456	98	+	.	Parent=FBgn0038170.1.mrna1;Target=FBgn0038170.1 1 130 +
Chr2	stalkie_big_nohaplotig	exon	124095512	124095717	99	+	.	Parent=FBgn0038170.1.mrna1;Target=FBgn0038170.1 131 336 +
Chr2	stalkie_big_nohaplotig	exon	124095778	124095944	100	+	.	Parent=FBgn0038170.1.mrna1;Target=FBgn0038170.1 337 503 +
Chr2	stalkie_big_nohaplotig	exon	124096009	124096165	100	+	.	Parent=FBgn0038170.1.mrna1;Target=FBgn0038170.1 504 660 +
Chr2	stalkie_big_nohaplotig	exon	124096254	124096544	100	+	.	Parent=FBgn0038170.1.mrna1;Target=FBgn0038170.1 661 951 +
Chr2	stalkie_big_nohaplotig	CDS	124095327	124095456	.	+	0	Parent=FBgn0038170.1.mrna1;Target=FBgn0038170.1 1 130 +
Chr2	stalkie_big_nohaplotig	CDS	124095512	124095717	.	+	2	Parent=FBgn0038170.1.mrna1;Target=FBgn0038170.1 131 336 +
Chr2	stalkie_big_nohaplotig	CDS	124095778	124095944	.	+	0	Parent=FBgn0038170.1.mrna1;Target=FBgn0038170.1 337 503 +
Chr2	stalkie_big_nohaplotig	CDS	124096009	124096165	.	+	1	Parent=FBgn0038170.1.mrna1;Target=FBgn0038170.1 504 660 +
Chr2	stalkie_big_nohaplotig	CDS	124096254	124096544	.	+	0	Parent=FBgn0038170.1.mrna1;Target=FBgn0038170.1 661 951 +
Chr2	gffcl	locus	124098641	124108747	.	-	.	ID=RLOC_00021278;geneIDs=FBgn0028487.2.path1;transcripts=FBgn0028487.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124098641	124108747	.	-	.	ID=FBgn0028487.2.mrna1;geneID=FBgn0028487.2.path1;Name=FBgn0028487.2;Dir=sensecoverage=100.0;identity=100.0;matches=1863;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021278
Chr2	stalkie_big_nohaplotig	exon	124098641	124098755	100	-	.	Parent=FBgn0028487.2.mrna1;Target=FBgn0028487.2 1749 1863 +
Chr2	stalkie_big_nohaplotig	exon	124098830	124099021	100	-	.	Parent=FBgn0028487.2.mrna1;Target=FBgn0028487.2 1557 1748 +
Chr2	stalkie_big_nohaplotig	exon	124099095	124099283	100	-	.	Parent=FBgn0028487.2.mrna1;Target=FBgn0028487.2 1368 1556 +
Chr2	stalkie_big_nohaplotig	exon	124099347	124099490	100	-	.	Parent=FBgn0028487.2.mrna1;Target=FBgn0028487.2 1224 1367 +
Chr2	stalkie_big_nohaplotig	exon	124099550	124099911	100	-	.	Parent=FBgn0028487.2.mrna1;Target=FBgn0028487.2 862 1223 +
Chr2	stalkie_big_nohaplotig	exon	124100027	124100199	100	-	.	Parent=FBgn0028487.2.mrna1;Target=FBgn0028487.2 689 861 +
Chr2	stalkie_big_nohaplotig	exon	124100304	124100427	100	-	.	Parent=FBgn0028487.2.mrna1;Target=FBgn0028487.2 565 688 +
Chr2	stalkie_big_nohaplotig	exon	124103924	124104127	100	-	.	Parent=FBgn0028487.2.mrna1;Target=FBgn0028487.2 361 564 +
Chr2	stalkie_big_nohaplotig	exon	124104211	124104395	100	-	.	Parent=FBgn0028487.2.mrna1;Target=FBgn0028487.2 176 360 +
Chr2	stalkie_big_nohaplotig	exon	124108573	124108747	100	-	.	Parent=FBgn0028487.2.mrna1;Target=FBgn0028487.2 1 175 +
Chr2	stalkie_big_nohaplotig	CDS	124098641	124098755	.	-	1	Parent=FBgn0028487.2.mrna1;Target=FBgn0028487.2 1749 1863 +
Chr2	stalkie_big_nohaplotig	CDS	124098830	124099021	.	-	1	Parent=FBgn0028487.2.mrna1;Target=FBgn0028487.2 1557 1748 +
Chr2	stalkie_big_nohaplotig	CDS	124099095	124099283	.	-	1	Parent=FBgn0028487.2.mrna1;Target=FBgn0028487.2 1368 1556 +
Chr2	stalkie_big_nohaplotig	CDS	124099347	124099490	.	-	1	Parent=FBgn0028487.2.mrna1;Target=FBgn0028487.2 1224 1367 +
Chr2	stalkie_big_nohaplotig	CDS	124099550	124099911	.	-	0	Parent=FBgn0028487.2.mrna1;Target=FBgn0028487.2 862 1223 +
Chr2	stalkie_big_nohaplotig	CDS	124100027	124100199	.	-	2	Parent=FBgn0028487.2.mrna1;Target=FBgn0028487.2 689 861 +
Chr2	stalkie_big_nohaplotig	CDS	124100304	124100427	.	-	0	Parent=FBgn0028487.2.mrna1;Target=FBgn0028487.2 565 688 +
Chr2	stalkie_big_nohaplotig	CDS	124103924	124104127	.	-	0	Parent=FBgn0028487.2.mrna1;Target=FBgn0028487.2 361 564 +
Chr2	stalkie_big_nohaplotig	CDS	124104211	124104395	.	-	2	Parent=FBgn0028487.2.mrna1;Target=FBgn0028487.2 176 360 +
Chr2	stalkie_big_nohaplotig	CDS	124108573	124108747	.	-	0	Parent=FBgn0028487.2.mrna1;Target=FBgn0028487.2 1 175 +
Chr2	gffcl	locus	124102266	124103337	.	+	.	ID=RLOC_00021279;geneIDs=comp155793_c0_seq1.path1;transcripts=comp155793_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124102266	124103337	.	+	.	ID=comp155793_c0_seq1.mrna1;geneID=comp155793_c0_seq1.path1;Name=comp155793_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1061;mismatches=11;indels=0;unknowns=0;Target=comp155793_c0_seq1 1072 1 .;CDS_Target=comp155793_c0_seq1 597 526 .;locus=RLOC_00021279
Chr2	stalkie_big_nohaplotig	exon	124102266	124103337	98	+	.	Parent=comp155793_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	124102791	124102862	.	+	0	Parent=comp155793_c0_seq1.mrna1
Chr2	gffcl	locus	124129457	124136820	.	-	.	ID=RLOC_00021280;geneIDs=FBgn0038172.1.path1;transcripts=FBgn0038172.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124129457	124136820	.	-	.	ID=FBgn0038172.1.mrna1;geneID=FBgn0038172.1.path1;Name=FBgn0038172.1;Dir=sensecoverage=100.0;identity=99.1;matches=1513;mismatches=14;indels=0;unknowns=0;locus=RLOC_00021280
Chr2	stalkie_big_nohaplotig	exon	124129457	124129553	100	-	.	Parent=FBgn0038172.1.mrna1;Target=FBgn0038172.1 1431 1527 +
Chr2	stalkie_big_nohaplotig	exon	124129614	124129971	98	-	.	Parent=FBgn0038172.1.mrna1;Target=FBgn0038172.1 1073 1430 +
Chr2	stalkie_big_nohaplotig	exon	124130170	124130306	100	-	.	Parent=FBgn0038172.1.mrna1;Target=FBgn0038172.1 936 1072 +
Chr2	stalkie_big_nohaplotig	exon	124131854	124132035	99	-	.	Parent=FBgn0038172.1.mrna1;Target=FBgn0038172.1 754 935 +
Chr2	stalkie_big_nohaplotig	exon	124132111	124132280	98	-	.	Parent=FBgn0038172.1.mrna1;Target=FBgn0038172.1 584 753 +
Chr2	stalkie_big_nohaplotig	exon	124133873	124134233	99	-	.	Parent=FBgn0038172.1.mrna1;Target=FBgn0038172.1 223 583 +
Chr2	stalkie_big_nohaplotig	exon	124134290	124134414	100	-	.	Parent=FBgn0038172.1.mrna1;Target=FBgn0038172.1 98 222 +
Chr2	stalkie_big_nohaplotig	exon	124136724	124136820	97	-	.	Parent=FBgn0038172.1.mrna1;Target=FBgn0038172.1 1 97 +
Chr2	stalkie_big_nohaplotig	CDS	124129457	124129553	.	-	1	Parent=FBgn0038172.1.mrna1;Target=FBgn0038172.1 1431 1527 +
Chr2	stalkie_big_nohaplotig	CDS	124129614	124129971	.	-	2	Parent=FBgn0038172.1.mrna1;Target=FBgn0038172.1 1073 1430 +
Chr2	stalkie_big_nohaplotig	CDS	124130170	124130306	.	-	1	Parent=FBgn0038172.1.mrna1;Target=FBgn0038172.1 936 1072 +
Chr2	stalkie_big_nohaplotig	CDS	124131854	124132035	.	-	0	Parent=FBgn0038172.1.mrna1;Target=FBgn0038172.1 754 935 +
Chr2	stalkie_big_nohaplotig	CDS	124132111	124132280	.	-	2	Parent=FBgn0038172.1.mrna1;Target=FBgn0038172.1 584 753 +
Chr2	stalkie_big_nohaplotig	CDS	124133873	124134233	.	-	0	Parent=FBgn0038172.1.mrna1;Target=FBgn0038172.1 223 583 +
Chr2	stalkie_big_nohaplotig	CDS	124134290	124134414	.	-	2	Parent=FBgn0038172.1.mrna1;Target=FBgn0038172.1 98 222 +
Chr2	stalkie_big_nohaplotig	CDS	124136724	124136820	.	-	0	Parent=FBgn0038172.1.mrna1;Target=FBgn0038172.1 1 97 +
Chr2	gffcl	locus	124130370	124130838	.	+	.	ID=RLOC_00021281;geneIDs=comp150378_c0_seq1.path1;transcripts=comp150378_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124130370	124130838	.	+	.	ID=comp150378_c0_seq1.mrna1;geneID=comp150378_c0_seq1.path1;Name=comp150378_c0_seq1;Dir=indeterminatecoverage=91.6;identity=98.3;matches=462;mismatches=7;indels=1;unknowns=0;Target=comp150378_c0_seq1 470 1 .;CDS_Target=comp150378_c0_seq1 53 3 .;locus=RLOC_00021281
Chr2	stalkie_big_nohaplotig	exon	124130370	124130838	98	+	.	Parent=comp150378_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	124130372	124130422	.	+	0	Parent=comp150378_c0_seq1.mrna1
Chr2	gffcl	locus	124145405	124147336	.	+	.	ID=RLOC_00021282;geneIDs=FBgn0038173.2.path1;transcripts=FBgn0038173.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124145405	124147336	.	+	.	ID=FBgn0038173.2.mrna1;geneID=FBgn0038173.2.path1;Name=FBgn0038173.2;Dir=sensecoverage=100.0;identity=98.8;matches=1505;mismatches=19;indels=0;unknowns=0;locus=RLOC_00021282
Chr2	stalkie_big_nohaplotig	exon	124145405	124145483	98	+	.	Parent=FBgn0038173.2.mrna1;Target=FBgn0038173.2 1 79 +
Chr2	stalkie_big_nohaplotig	exon	124145560	124145768	99	+	.	Parent=FBgn0038173.2.mrna1;Target=FBgn0038173.2 80 288 +
Chr2	stalkie_big_nohaplotig	exon	124145830	124146115	97	+	.	Parent=FBgn0038173.2.mrna1;Target=FBgn0038173.2 289 574 +
Chr2	stalkie_big_nohaplotig	exon	124146193	124146362	97	+	.	Parent=FBgn0038173.2.mrna1;Target=FBgn0038173.2 575 744 +
Chr2	stalkie_big_nohaplotig	exon	124146430	124146611	99	+	.	Parent=FBgn0038173.2.mrna1;Target=FBgn0038173.2 745 926 +
Chr2	stalkie_big_nohaplotig	exon	124146679	124146815	99	+	.	Parent=FBgn0038173.2.mrna1;Target=FBgn0038173.2 927 1063 +
Chr2	stalkie_big_nohaplotig	exon	124146876	124147336	99	+	.	Parent=FBgn0038173.2.mrna1;Target=FBgn0038173.2 1064 1524 +
Chr2	stalkie_big_nohaplotig	CDS	124145405	124145483	.	+	0	Parent=FBgn0038173.2.mrna1;Target=FBgn0038173.2 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	124145560	124145768	.	+	2	Parent=FBgn0038173.2.mrna1;Target=FBgn0038173.2 80 288 +
Chr2	stalkie_big_nohaplotig	CDS	124145830	124146115	.	+	0	Parent=FBgn0038173.2.mrna1;Target=FBgn0038173.2 289 574 +
Chr2	stalkie_big_nohaplotig	CDS	124146193	124146362	.	+	2	Parent=FBgn0038173.2.mrna1;Target=FBgn0038173.2 575 744 +
Chr2	stalkie_big_nohaplotig	CDS	124146430	124146611	.	+	0	Parent=FBgn0038173.2.mrna1;Target=FBgn0038173.2 745 926 +
Chr2	stalkie_big_nohaplotig	CDS	124146679	124146815	.	+	1	Parent=FBgn0038173.2.mrna1;Target=FBgn0038173.2 927 1063 +
Chr2	stalkie_big_nohaplotig	CDS	124146876	124147336	.	+	2	Parent=FBgn0038173.2.mrna1;Target=FBgn0038173.2 1064 1524 +
Chr2	gffcl	locus	124153815	124156626	.	+	.	ID=RLOC_00021283;geneIDs=FBgn0038173.1.path1;transcripts=FBgn0038173.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124153815	124156626	.	+	.	ID=FBgn0038173.1.mrna1;geneID=FBgn0038173.1.path1;Name=FBgn0038173.1;Dir=sensecoverage=99.9;identity=99.9;matches=1641;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021283
Chr2	stalkie_big_nohaplotig	exon	124153815	124153891	100	+	.	Parent=FBgn0038173.1.mrna1;Target=FBgn0038173.1 3 79 +
Chr2	stalkie_big_nohaplotig	exon	124153957	124154064	100	+	.	Parent=FBgn0038173.1.mrna1;Target=FBgn0038173.1 80 187 +
Chr2	stalkie_big_nohaplotig	exon	124154137	124154634	100	+	.	Parent=FBgn0038173.1.mrna1;Target=FBgn0038173.1 188 685 +
Chr2	stalkie_big_nohaplotig	exon	124155500	124155669	100	+	.	Parent=FBgn0038173.1.mrna1;Target=FBgn0038173.1 686 855 +
Chr2	stalkie_big_nohaplotig	exon	124155722	124155903	100	+	.	Parent=FBgn0038173.1.mrna1;Target=FBgn0038173.1 856 1037 +
Chr2	stalkie_big_nohaplotig	exon	124155965	124156101	100	+	.	Parent=FBgn0038173.1.mrna1;Target=FBgn0038173.1 1038 1174 +
Chr2	stalkie_big_nohaplotig	exon	124156157	124156626	99	+	.	Parent=FBgn0038173.1.mrna1;Target=FBgn0038173.1 1175 1644 +
Chr2	stalkie_big_nohaplotig	CDS	124153816	124153891	.	+	0	Parent=FBgn0038173.1.mrna1;Target=FBgn0038173.1 4 79 +
Chr2	stalkie_big_nohaplotig	CDS	124153957	124154064	.	+	2	Parent=FBgn0038173.1.mrna1;Target=FBgn0038173.1 80 187 +
Chr2	stalkie_big_nohaplotig	CDS	124154137	124154634	.	+	2	Parent=FBgn0038173.1.mrna1;Target=FBgn0038173.1 188 685 +
Chr2	stalkie_big_nohaplotig	CDS	124155500	124155669	.	+	2	Parent=FBgn0038173.1.mrna1;Target=FBgn0038173.1 686 855 +
Chr2	stalkie_big_nohaplotig	CDS	124155722	124155903	.	+	0	Parent=FBgn0038173.1.mrna1;Target=FBgn0038173.1 856 1037 +
Chr2	stalkie_big_nohaplotig	CDS	124155965	124156101	.	+	1	Parent=FBgn0038173.1.mrna1;Target=FBgn0038173.1 1038 1174 +
Chr2	stalkie_big_nohaplotig	CDS	124156157	124156626	.	+	2	Parent=FBgn0038173.1.mrna1;Target=FBgn0038173.1 1175 1644 +
Chr2	gffcl	locus	124157931	124158820	.	-	.	ID=RLOC_00021284;geneIDs=FBgn0051469.1.path1;transcripts=FBgn0051469.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124157931	124158820	.	-	.	ID=FBgn0051469.1.mrna1;geneID=FBgn0051469.1.path1;Name=FBgn0051469.1;Dir=sensecoverage=100.0;identity=100.0;matches=483;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021284
Chr2	stalkie_big_nohaplotig	exon	124157931	124158014	100	-	.	Parent=FBgn0051469.1.mrna1;Target=FBgn0051469.1 400 483 +
Chr2	stalkie_big_nohaplotig	exon	124158069	124158242	100	-	.	Parent=FBgn0051469.1.mrna1;Target=FBgn0051469.1 226 399 +
Chr2	stalkie_big_nohaplotig	exon	124158530	124158711	100	-	.	Parent=FBgn0051469.1.mrna1;Target=FBgn0051469.1 44 225 +
Chr2	stalkie_big_nohaplotig	exon	124158778	124158820	100	-	.	Parent=FBgn0051469.1.mrna1;Target=FBgn0051469.1 1 43 +
Chr2	stalkie_big_nohaplotig	CDS	124157931	124158014	.	-	0	Parent=FBgn0051469.1.mrna1;Target=FBgn0051469.1 400 483 +
Chr2	stalkie_big_nohaplotig	CDS	124158069	124158242	.	-	0	Parent=FBgn0051469.1.mrna1;Target=FBgn0051469.1 226 399 +
Chr2	stalkie_big_nohaplotig	CDS	124158530	124158711	.	-	2	Parent=FBgn0051469.1.mrna1;Target=FBgn0051469.1 44 225 +
Chr2	stalkie_big_nohaplotig	CDS	124158778	124158820	.	-	0	Parent=FBgn0051469.1.mrna1;Target=FBgn0051469.1 1 43 +
Chr2	gffcl	locus	124158969	124159566	.	-	.	ID=RLOC_00021285;geneIDs=FBgn0040077.1.path1;transcripts=FBgn0040077.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124158969	124159566	.	-	.	ID=FBgn0040077.1.mrna1;geneID=FBgn0040077.1.path1;Name=FBgn0040077.1;Dir=sensecoverage=100.0;identity=100.0;matches=486;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021285
Chr2	stalkie_big_nohaplotig	exon	124158969	124159058	100	-	.	Parent=FBgn0040077.1.mrna1;Target=FBgn0040077.1 397 486 +
Chr2	stalkie_big_nohaplotig	exon	124159115	124159467	100	-	.	Parent=FBgn0040077.1.mrna1;Target=FBgn0040077.1 44 396 +
Chr2	stalkie_big_nohaplotig	exon	124159524	124159566	100	-	.	Parent=FBgn0040077.1.mrna1;Target=FBgn0040077.1 1 43 +
Chr2	stalkie_big_nohaplotig	CDS	124158969	124159058	.	-	0	Parent=FBgn0040077.1.mrna1;Target=FBgn0040077.1 397 486 +
Chr2	stalkie_big_nohaplotig	CDS	124159115	124159467	.	-	2	Parent=FBgn0040077.1.mrna1;Target=FBgn0040077.1 44 396 +
Chr2	stalkie_big_nohaplotig	CDS	124159524	124159566	.	-	0	Parent=FBgn0040077.1.mrna1;Target=FBgn0040077.1 1 43 +
Chr2	stalkie_big_nohaplotig	mRNA	124341305	124342877	.	-	.	ID=comp159445_c0_seq1.mrna1;geneID=comp159445_c0_seq1.path1;Name=comp159445_c0_seq1;Dir=indeterminatecoverage=97.6;identity=92.3;matches=1478;mismatches=63;indels=61;unknowns=0;Target=comp159445_c0_seq1 1609 40 .;CDS_Target=comp159445_c0_seq1 784 710 .;locus=RLOC_00021286
Chr2	stalkie_big_nohaplotig	exon	124341305	124342877	92	-	.	Parent=comp159445_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	124342142	124342214	.	-	0	Parent=comp159445_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124343728	124344937	.	+	.	ID=comp148804_c0_seq1.mrna1;geneID=comp148804_c0_seq1.path1;Name=comp148804_c0_seq1;Dir=indeterminatecoverage=98.7;identity=99.3;matches=1206;mismatches=4;indels=4;unknowns=0;Target=comp148804_c0_seq1 1230 17 .;CDS_Target=comp148804_c0_seq1 920 786 .;locus=RLOC_00021286
Chr2	stalkie_big_nohaplotig	exon	124343728	124344937	99	+	.	Parent=comp148804_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	124344495	124344629	.	+	0	Parent=comp148804_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124379909	124396728	.	-	.	ID=comp155073_c0_seq1.mrna1;geneID=comp155073_c0_seq1.path1;Name=comp155073_c0_seq1;Dir=indeterminatecoverage=85.7;identity=100.0;matches=4410;mismatches=0;indels=2;unknowns=0;Target=comp155073_c0_seq1 3582 3247 .;locus=RLOC_00021286
Chr2	stalkie_big_nohaplotig	exon	124379909	124379979	100	-	.	Parent=comp155073_c0_seq1.mrna1;Target=comp155073_c0_seq1 5146 5076 .
Chr2	stalkie_big_nohaplotig	exon	124380459	124380698	100	-	.	Parent=comp155073_c0_seq1.mrna1;Target=comp155073_c0_seq1 5075 4836 .
Chr2	stalkie_big_nohaplotig	exon	124389916	124390002	100	-	.	Parent=comp155073_c0_seq1.mrna1;Target=comp155073_c0_seq1 4835 4749 .
Chr2	stalkie_big_nohaplotig	exon	124390433	124391157	100	-	.	Parent=comp155073_c0_seq1.mrna1;Target=comp155073_c0_seq1 4748 4024 .
Chr2	stalkie_big_nohaplotig	exon	124391236	124391395	100	-	.	Parent=comp155073_c0_seq1.mrna1;Target=comp155073_c0_seq1 4023 3864 .
Chr2	stalkie_big_nohaplotig	exon	124391474	124391517	100	-	.	Parent=comp155073_c0_seq1.mrna1;Target=comp155073_c0_seq1 3863 3820 .
Chr2	stalkie_big_nohaplotig	exon	124391635	124391746	100	-	.	Parent=comp155073_c0_seq1.mrna1;Target=comp155073_c0_seq1 3819 3708 .
Chr2	stalkie_big_nohaplotig	exon	124392098	124392618	100	-	.	Parent=comp155073_c0_seq1.mrna1;Target=comp155073_c0_seq1 3707 3187 .
Chr2	stalkie_big_nohaplotig	exon	124392685	124393006	100	-	.	Parent=comp155073_c0_seq1.mrna1;Target=comp155073_c0_seq1 3186 2865 .
Chr2	stalkie_big_nohaplotig	exon	124393127	124393297	100	-	.	Parent=comp155073_c0_seq1.mrna1;Target=comp155073_c0_seq1 2864 2694 .
Chr2	stalkie_big_nohaplotig	exon	124394673	124395130	100	-	.	Parent=comp155073_c0_seq1.mrna1;Target=comp155073_c0_seq1 2693 2236 .
Chr2	stalkie_big_nohaplotig	exon	124395230	124396728	99	-	.	Parent=comp155073_c0_seq1.mrna1;Target=comp155073_c0_seq1 2235 735 .
Chr2	stalkie_big_nohaplotig	CDS	124392223	124392558	.	-	0	Parent=comp155073_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124380617	124395658	.	+	.	ID=FBgn0038181.1.mrna1;geneID=FBgn0038181.1.path1;Name=FBgn0038181.1;Dir=sensecoverage=100.0;identity=100.0;matches=2994;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021286
Chr2	stalkie_big_nohaplotig	exon	124380617	124380698	100	+	.	Parent=FBgn0038181.1.mrna1;Target=FBgn0038181.1 1 82 +
Chr2	stalkie_big_nohaplotig	exon	124389916	124390002	100	+	.	Parent=FBgn0038181.1.mrna1;Target=FBgn0038181.1 83 169 +
Chr2	stalkie_big_nohaplotig	exon	124390433	124391155	100	+	.	Parent=FBgn0038181.1.mrna1;Target=FBgn0038181.1 170 892 +
Chr2	stalkie_big_nohaplotig	exon	124391897	124392618	100	+	.	Parent=FBgn0038181.1.mrna1;Target=FBgn0038181.1 893 1614 +
Chr2	stalkie_big_nohaplotig	exon	124392685	124393006	100	+	.	Parent=FBgn0038181.1.mrna1;Target=FBgn0038181.1 1615 1936 +
Chr2	stalkie_big_nohaplotig	exon	124393127	124393299	100	+	.	Parent=FBgn0038181.1.mrna1;Target=FBgn0038181.1 1937 2109 +
Chr2	stalkie_big_nohaplotig	exon	124394675	124395130	100	+	.	Parent=FBgn0038181.1.mrna1;Target=FBgn0038181.1 2110 2565 +
Chr2	stalkie_big_nohaplotig	exon	124395230	124395658	100	+	.	Parent=FBgn0038181.1.mrna1;Target=FBgn0038181.1 2566 2994 +
Chr2	stalkie_big_nohaplotig	CDS	124380617	124380698	.	+	0	Parent=FBgn0038181.1.mrna1;Target=FBgn0038181.1 1 82 +
Chr2	stalkie_big_nohaplotig	CDS	124389916	124390002	.	+	2	Parent=FBgn0038181.1.mrna1;Target=FBgn0038181.1 83 169 +
Chr2	stalkie_big_nohaplotig	CDS	124390433	124391155	.	+	2	Parent=FBgn0038181.1.mrna1;Target=FBgn0038181.1 170 892 +
Chr2	stalkie_big_nohaplotig	CDS	124391897	124392618	.	+	2	Parent=FBgn0038181.1.mrna1;Target=FBgn0038181.1 893 1614 +
Chr2	stalkie_big_nohaplotig	CDS	124392685	124393006	.	+	0	Parent=FBgn0038181.1.mrna1;Target=FBgn0038181.1 1615 1936 +
Chr2	stalkie_big_nohaplotig	CDS	124393127	124393299	.	+	2	Parent=FBgn0038181.1.mrna1;Target=FBgn0038181.1 1937 2109 +
Chr2	stalkie_big_nohaplotig	CDS	124394675	124395130	.	+	0	Parent=FBgn0038181.1.mrna1;Target=FBgn0038181.1 2110 2565 +
Chr2	stalkie_big_nohaplotig	CDS	124395230	124395658	.	+	0	Parent=FBgn0038181.1.mrna1;Target=FBgn0038181.1 2566 2994 +
Chr2	stalkie_big_nohaplotig	mRNA	124389980	124390454	.	+	.	ID=comp115216_c0_seq1.mrna1;geneID=comp115216_c0_seq1.path1;Name=comp115216_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=475;mismatches=0;indels=0;unknowns=0;Target=comp115216_c0_seq1 475 1 .;CDS_Target=comp115216_c0_seq1 49 2 .;locus=RLOC_00021286
Chr2	stalkie_big_nohaplotig	exon	124389980	124390454	100	+	.	Parent=comp115216_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	124389981	124390028	.	+	0	Parent=comp115216_c0_seq1.mrna1
Chr2	gffcl	locus	124283857	124284564	.	-	.	ID=RLOC_00021287;geneIDs=comp148678_c0_seq1.path1;transcripts=comp148678_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124283857	124284564	.	-	.	ID=comp148678_c0_seq1.mrna1;geneID=comp148678_c0_seq1.path1;Name=comp148678_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=707;mismatches=1;indels=0;unknowns=0;Target=comp148678_c0_seq1 708 1 .;CDS_Target=comp148678_c0_seq1 646 125 .;locus=RLOC_00021287
Chr2	stalkie_big_nohaplotig	exon	124283857	124284564	99	-	.	Parent=comp148678_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	124283919	124284440	.	-	0	Parent=comp148678_c0_seq1.mrna1
Chr2	gffcl	locus	124337862	124338890	.	+	.	ID=RLOC_00021289;geneIDs=comp147602_c0_seq1.path1;transcripts=comp147602_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124337862	124338890	.	+	.	ID=comp147602_c0_seq1.mrna1;geneID=comp147602_c0_seq1.path1;Name=comp147602_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1026;mismatches=3;indels=0;unknowns=0;Target=comp147602_c0_seq1 1029 1 .;CDS_Target=comp147602_c0_seq1 852 724 .;locus=RLOC_00021289
Chr2	stalkie_big_nohaplotig	exon	124337862	124338890	99	+	.	Parent=comp147602_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	124338585	124338713	.	+	0	Parent=comp147602_c0_seq1.mrna1
Chr2	gffcl	locus	124347174	124348143	.	+	.	ID=RLOC_00021290;geneIDs=FBgn0035008.1.path1;transcripts=FBgn0035008.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124347174	124348143	.	+	.	ID=FBgn0035008.1.mrna1;geneID=FBgn0035008.1.path1;Name=FBgn0035008.1;Dir=sensecoverage=100.0;identity=100.0;matches=726;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021290
Chr2	stalkie_big_nohaplotig	exon	124347174	124347250	100	+	.	Parent=FBgn0035008.1.mrna1;Target=FBgn0035008.1 1 77 +
Chr2	stalkie_big_nohaplotig	exon	124347325	124347468	100	+	.	Parent=FBgn0035008.1.mrna1;Target=FBgn0035008.1 78 221 +
Chr2	stalkie_big_nohaplotig	exon	124347527	124347715	100	+	.	Parent=FBgn0035008.1.mrna1;Target=FBgn0035008.1 222 410 +
Chr2	stalkie_big_nohaplotig	exon	124347769	124347960	100	+	.	Parent=FBgn0035008.1.mrna1;Target=FBgn0035008.1 411 602 +
Chr2	stalkie_big_nohaplotig	exon	124348020	124348143	100	+	.	Parent=FBgn0035008.1.mrna1;Target=FBgn0035008.1 603 726 +
Chr2	stalkie_big_nohaplotig	CDS	124347174	124347250	.	+	0	Parent=FBgn0035008.1.mrna1;Target=FBgn0035008.1 1 77 +
Chr2	stalkie_big_nohaplotig	CDS	124347325	124347468	.	+	1	Parent=FBgn0035008.1.mrna1;Target=FBgn0035008.1 78 221 +
Chr2	stalkie_big_nohaplotig	CDS	124347527	124347715	.	+	1	Parent=FBgn0035008.1.mrna1;Target=FBgn0035008.1 222 410 +
Chr2	stalkie_big_nohaplotig	CDS	124347769	124347960	.	+	1	Parent=FBgn0035008.1.mrna1;Target=FBgn0035008.1 411 602 +
Chr2	stalkie_big_nohaplotig	CDS	124348020	124348143	.	+	1	Parent=FBgn0035008.1.mrna1;Target=FBgn0035008.1 603 726 +
Chr2	gffcl	locus	124355145	124357797	.	+	.	ID=RLOC_00021291;geneIDs=comp156473_c1_seq1.path1;transcripts=comp156473_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124355145	124357797	.	+	.	ID=comp156473_c1_seq1.mrna1;geneID=comp156473_c1_seq1.path1;Name=comp156473_c1_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=664;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021291
Chr2	stalkie_big_nohaplotig	exon	124355145	124355262	100	+	.	Parent=comp156473_c1_seq1.mrna1;Target=comp156473_c1_seq1 551 668 -
Chr2	stalkie_big_nohaplotig	exon	124355367	124355422	96	+	.	Parent=comp156473_c1_seq1.mrna1;Target=comp156473_c1_seq1 495 550 -
Chr2	stalkie_big_nohaplotig	exon	124355506	124355756	100	+	.	Parent=comp156473_c1_seq1.mrna1;Target=comp156473_c1_seq1 244 494 -
Chr2	stalkie_big_nohaplotig	exon	124357492	124357679	98	+	.	Parent=comp156473_c1_seq1.mrna1;Target=comp156473_c1_seq1 56 243 -
Chr2	stalkie_big_nohaplotig	exon	124357743	124357797	100	+	.	Parent=comp156473_c1_seq1.mrna1;Target=comp156473_c1_seq1 1 55 -
Chr2	stalkie_big_nohaplotig	CDS	124355242	124355262	.	+	0	Parent=comp156473_c1_seq1.mrna1;Target=comp156473_c1_seq1 551 571 .
Chr2	stalkie_big_nohaplotig	CDS	124355367	124355422	.	+	0	Parent=comp156473_c1_seq1.mrna1;Target=comp156473_c1_seq1 495 550 .
Chr2	stalkie_big_nohaplotig	CDS	124355506	124355756	.	+	1	Parent=comp156473_c1_seq1.mrna1;Target=comp156473_c1_seq1 244 494 .
Chr2	stalkie_big_nohaplotig	CDS	124357492	124357679	.	+	2	Parent=comp156473_c1_seq1.mrna1;Target=comp156473_c1_seq1 56 243 .
Chr2	stalkie_big_nohaplotig	CDS	124357743	124357796	.	+	0	Parent=comp156473_c1_seq1.mrna1;Target=comp156473_c1_seq1 2 55 .
Chr2	gffcl	locus	124368431	124371698	.	+	.	ID=RLOC_00021292;geneIDs=FBgn0038180.1.path1,comp51179_c0_seq1.path1;transcripts=FBgn0038180.1.mrna1,comp51179_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124368431	124371698	.	+	.	ID=FBgn0038180.1.mrna1;geneID=FBgn0038180.1.path1;Name=FBgn0038180.1;Dir=sensecoverage=99.7;identity=99.8;matches=1722;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021292
Chr2	stalkie_big_nohaplotig	exon	124368431	124369050	99	+	.	Parent=FBgn0038180.1.mrna1;Target=FBgn0038180.1 7 626 +
Chr2	stalkie_big_nohaplotig	exon	124369118	124369241	99	+	.	Parent=FBgn0038180.1.mrna1;Target=FBgn0038180.1 627 750 +
Chr2	stalkie_big_nohaplotig	exon	124369627	124370118	99	+	.	Parent=FBgn0038180.1.mrna1;Target=FBgn0038180.1 751 1242 +
Chr2	stalkie_big_nohaplotig	exon	124370319	124370456	100	+	.	Parent=FBgn0038180.1.mrna1;Target=FBgn0038180.1 1243 1380 +
Chr2	stalkie_big_nohaplotig	exon	124371207	124371404	100	+	.	Parent=FBgn0038180.1.mrna1;Target=FBgn0038180.1 1381 1578 +
Chr2	stalkie_big_nohaplotig	exon	124371546	124371698	100	+	.	Parent=FBgn0038180.1.mrna1;Target=FBgn0038180.1 1579 1731 +
Chr2	stalkie_big_nohaplotig	CDS	124368431	124369050	.	+	0	Parent=FBgn0038180.1.mrna1;Target=FBgn0038180.1 7 626 +
Chr2	stalkie_big_nohaplotig	CDS	124369118	124369241	.	+	1	Parent=FBgn0038180.1.mrna1;Target=FBgn0038180.1 627 750 +
Chr2	stalkie_big_nohaplotig	CDS	124369627	124370118	.	+	0	Parent=FBgn0038180.1.mrna1;Target=FBgn0038180.1 751 1242 +
Chr2	stalkie_big_nohaplotig	CDS	124370319	124370456	.	+	0	Parent=FBgn0038180.1.mrna1;Target=FBgn0038180.1 1243 1380 +
Chr2	stalkie_big_nohaplotig	CDS	124371207	124371404	.	+	0	Parent=FBgn0038180.1.mrna1;Target=FBgn0038180.1 1381 1578 +
Chr2	stalkie_big_nohaplotig	CDS	124371546	124371698	.	+	0	Parent=FBgn0038180.1.mrna1;Target=FBgn0038180.1 1579 1731 +
Chr2	stalkie_big_nohaplotig	mRNA	124370715	124371230	.	+	.	ID=comp51179_c0_seq1.mrna1;geneID=comp51179_c0_seq1.path1;Name=comp51179_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=516;mismatches=0;indels=0;unknowns=0;Target=comp51179_c0_seq1 516 1 .;CDS_Target=comp51179_c0_seq1 199 2 .;locus=RLOC_00021292
Chr2	stalkie_big_nohaplotig	exon	124370715	124371230	100	+	.	Parent=comp51179_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	124370716	124370913	.	+	0	Parent=comp51179_c0_seq1.mrna1
Chr2	gffcl	locus	124379956	124380482	.	+	.	ID=RLOC_00021293;geneIDs=comp130225_c0_seq1.path1;transcripts=comp130225_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124379956	124380482	.	+	.	ID=comp130225_c0_seq1.mrna1;geneID=comp130225_c0_seq1.path1;Name=comp130225_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=391;mismatches=0;indels=0;unknowns=0;Target=comp130225_c0_seq1 327 389 .;locus=RLOC_00021293
Chr2	stalkie_big_nohaplotig	exon	124379956	124380322	100	+	.	Parent=comp130225_c0_seq1.mrna1;Target=comp130225_c0_seq1 25 391 -
Chr2	stalkie_big_nohaplotig	exon	124380459	124380482	100	+	.	Parent=comp130225_c0_seq1.mrna1;Target=comp130225_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	CDS	124379958	124380020	.	+	0	Parent=comp130225_c0_seq1.mrna1
Chr2	gffcl	locus	124398934	124399707	.	-	.	ID=RLOC_00021294;geneIDs=FBgn0260464.1.path1;transcripts=FBgn0260464.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124398934	124399707	.	-	.	ID=FBgn0260464.1.mrna1;geneID=FBgn0260464.1.path1;Name=FBgn0260464.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=774;mismatches=0;indels=0;unknowns=0;Target=FBgn0260464.1 774 1 .;locus=RLOC_00021294
Chr2	stalkie_big_nohaplotig	exon	124398934	124399707	100	-	.	Parent=FBgn0260464.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	124398934	124399707	.	-	0	Parent=FBgn0260464.1.mrna1
Chr2	gffcl	locus	124407029	124415425	.	+	.	ID=RLOC_00021295;geneIDs=FBgn0000454.1.path1;transcripts=FBgn0000454.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124407029	124415425	.	+	.	ID=FBgn0000454.1.mrna1;geneID=FBgn0000454.1.path1;Name=FBgn0000454.1;Dir=sensecoverage=100.0;identity=100.0;matches=1605;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021295
Chr2	stalkie_big_nohaplotig	exon	124407029	124407129	100	+	.	Parent=FBgn0000454.1.mrna1;Target=FBgn0000454.1 1 101 +
Chr2	stalkie_big_nohaplotig	exon	124413577	124413850	100	+	.	Parent=FBgn0000454.1.mrna1;Target=FBgn0000454.1 102 375 +
Chr2	stalkie_big_nohaplotig	exon	124413915	124414013	100	+	.	Parent=FBgn0000454.1.mrna1;Target=FBgn0000454.1 376 474 +
Chr2	stalkie_big_nohaplotig	exon	124414080	124414221	100	+	.	Parent=FBgn0000454.1.mrna1;Target=FBgn0000454.1 475 616 +
Chr2	stalkie_big_nohaplotig	exon	124414296	124414636	100	+	.	Parent=FBgn0000454.1.mrna1;Target=FBgn0000454.1 617 957 +
Chr2	stalkie_big_nohaplotig	exon	124414706	124415188	100	+	.	Parent=FBgn0000454.1.mrna1;Target=FBgn0000454.1 958 1440 +
Chr2	stalkie_big_nohaplotig	exon	124415261	124415425	100	+	.	Parent=FBgn0000454.1.mrna1;Target=FBgn0000454.1 1441 1605 +
Chr2	stalkie_big_nohaplotig	CDS	124407029	124407129	.	+	0	Parent=FBgn0000454.1.mrna1;Target=FBgn0000454.1 1 101 +
Chr2	stalkie_big_nohaplotig	CDS	124413577	124413850	.	+	1	Parent=FBgn0000454.1.mrna1;Target=FBgn0000454.1 102 375 +
Chr2	stalkie_big_nohaplotig	CDS	124413915	124414013	.	+	0	Parent=FBgn0000454.1.mrna1;Target=FBgn0000454.1 376 474 +
Chr2	stalkie_big_nohaplotig	CDS	124414080	124414221	.	+	0	Parent=FBgn0000454.1.mrna1;Target=FBgn0000454.1 475 616 +
Chr2	stalkie_big_nohaplotig	CDS	124414296	124414636	.	+	2	Parent=FBgn0000454.1.mrna1;Target=FBgn0000454.1 617 957 +
Chr2	stalkie_big_nohaplotig	CDS	124414706	124415188	.	+	0	Parent=FBgn0000454.1.mrna1;Target=FBgn0000454.1 958 1440 +
Chr2	stalkie_big_nohaplotig	CDS	124415261	124415425	.	+	0	Parent=FBgn0000454.1.mrna1;Target=FBgn0000454.1 1441 1605 +
Chr2	gffcl	locus	124451134	124451705	.	+	.	ID=RLOC_00021296;geneIDs=comp147901_c0_seq1.path1;transcripts=comp147901_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124451134	124451705	.	+	.	ID=comp147901_c0_seq1.mrna1;geneID=comp147901_c0_seq1.path1;Name=comp147901_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.1;matches=567;mismatches=5;indels=0;unknowns=0;Target=comp147901_c0_seq1 582 11 .;CDS_Target=comp147901_c0_seq1 278 165 .;locus=RLOC_00021296
Chr2	stalkie_big_nohaplotig	exon	124451134	124451705	99	+	.	Parent=comp147901_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	124451288	124451401	.	+	0	Parent=comp147901_c0_seq1.mrna1
Chr2	gffcl	locus	124464416	124464991	.	+	.	ID=RLOC_00021297;geneIDs=comp147436_c0_seq1.path1;transcripts=comp147436_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124464416	124464991	.	+	.	ID=comp147436_c0_seq1.mrna1;geneID=comp147436_c0_seq1.path1;Name=comp147436_c0_seq1;Dir=indeterminatecoverage=96.5;identity=100.0;matches=576;mismatches=0;indels=0;unknowns=0;Target=comp147436_c0_seq1 576 1 .;CDS_Target=comp147436_c0_seq1 87 1 .;locus=RLOC_00021297
Chr2	stalkie_big_nohaplotig	exon	124464416	124464991	100	+	.	Parent=comp147436_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	124464416	124464502	.	+	0	Parent=comp147436_c0_seq1.mrna1
Chr2	gffcl	locus	124484820	124487429	.	+	.	ID=RLOC_00021298;geneIDs=comp147756_c0_seq1.path1;transcripts=comp147756_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124484820	124487429	.	+	.	ID=comp147756_c0_seq1.mrna1;geneID=comp147756_c0_seq1.path1;Name=comp147756_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.9;matches=2608;mismatches=2;indels=0;unknowns=0;Target=comp147756_c0_seq1 2610 1 .;CDS_Target=comp147756_c0_seq1 1753 1577 .;locus=RLOC_00021298
Chr2	stalkie_big_nohaplotig	exon	124484820	124487429	99	+	.	Parent=comp147756_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	124486396	124486572	.	+	0	Parent=comp147756_c0_seq1.mrna1
Chr2	gffcl	locus	124558650	124565277	.	-	.	ID=RLOC_00021299;geneIDs=FBgn0037435.1.path1,comp156125_c0_seq1.path1;transcripts=comp156125_c0_seq1.mrna1,FBgn0037435.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124558650	124565116	.	-	.	ID=comp156125_c0_seq1.mrna1;geneID=comp156125_c0_seq1.path1;Name=comp156125_c0_seq1;Dir=sensecoverage=100.0;identity=98.9;matches=1135;mismatches=12;indels=1;unknowns=0;Target=comp156125_c0_seq1 540 677 +;locus=RLOC_00021299
Chr2	stalkie_big_nohaplotig	exon	124558650	124559387	99	-	.	Parent=comp156125_c0_seq1.mrna1;Target=comp156125_c0_seq1 410 1148 +
Chr2	stalkie_big_nohaplotig	exon	124559488	124559764	100	-	.	Parent=comp156125_c0_seq1.mrna1;Target=comp156125_c0_seq1 133 409 +
Chr2	stalkie_big_nohaplotig	exon	124560701	124560810	91	-	.	Parent=comp156125_c0_seq1.mrna1;Target=comp156125_c0_seq1 23 132 +
Chr2	stalkie_big_nohaplotig	exon	124565095	124565116	100	-	.	Parent=comp156125_c0_seq1.mrna1;Target=comp156125_c0_seq1 1 22 +
Chr2	stalkie_big_nohaplotig	CDS	124559120	124559257	.	-	0	Parent=comp156125_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124563791	124565277	.	-	.	ID=FBgn0037435.1.mrna1;geneID=FBgn0037435.1.path1;Name=FBgn0037435.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1487;mismatches=0;indels=1;unknowns=0;Target=FBgn0037435.1 1488 1 .;CDS_Target=FBgn0037435.1 35 3 .;locus=RLOC_00021299
Chr2	stalkie_big_nohaplotig	exon	124563791	124565277	99	-	.	Parent=FBgn0037435.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	124565244	124565275	.	-	0	Parent=FBgn0037435.1.mrna1
Chr2	gffcl	locus	124567228	124567677	.	+	.	ID=RLOC_00021300;geneIDs=FBgn0261789.1.path1;transcripts=FBgn0261789.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124567228	124567677	.	+	.	ID=FBgn0261789.1.mrna1;geneID=FBgn0261789.1.path1;Name=FBgn0261789.1;Dir=sensecoverage=100.0;identity=100.0;matches=375;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021300
Chr2	stalkie_big_nohaplotig	exon	124567228	124567247	100	+	.	Parent=FBgn0261789.1.mrna1;Target=FBgn0261789.1 1 20 +
Chr2	stalkie_big_nohaplotig	exon	124567323	124567677	100	+	.	Parent=FBgn0261789.1.mrna1;Target=FBgn0261789.1 21 375 +
Chr2	stalkie_big_nohaplotig	CDS	124567228	124567247	.	+	0	Parent=FBgn0261789.1.mrna1;Target=FBgn0261789.1 1 20 +
Chr2	stalkie_big_nohaplotig	CDS	124567323	124567677	.	+	1	Parent=FBgn0261789.1.mrna1;Target=FBgn0261789.1 21 375 +
Chr2	gffcl	locus	124567818	124568612	.	-	.	ID=RLOC_00021301;geneIDs=FBgn0037433.1.path1;transcripts=FBgn0037433.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124567818	124568612	.	-	.	ID=FBgn0037433.1.mrna1;geneID=FBgn0037433.1.path1;Name=FBgn0037433.1;Dir=sensecoverage=100.0;identity=99.9;matches=734;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021301
Chr2	stalkie_big_nohaplotig	exon	124567818	124568360	99	-	.	Parent=FBgn0037433.1.mrna1;Target=FBgn0037433.1 193 735 +
Chr2	stalkie_big_nohaplotig	exon	124568421	124568612	100	-	.	Parent=FBgn0037433.1.mrna1;Target=FBgn0037433.1 1 192 +
Chr2	stalkie_big_nohaplotig	CDS	124567818	124568360	.	-	0	Parent=FBgn0037433.1.mrna1;Target=FBgn0037433.1 193 735 +
Chr2	stalkie_big_nohaplotig	CDS	124568421	124568612	.	-	0	Parent=FBgn0037433.1.mrna1;Target=FBgn0037433.1 1 192 +
Chr2	gffcl	locus	124569128	124569852	.	-	.	ID=RLOC_00021302;geneIDs=FBgn0037433.3.path1;transcripts=FBgn0037433.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124569128	124569852	.	-	.	ID=FBgn0037433.3.mrna1;geneID=FBgn0037433.3.path1;Name=FBgn0037433.3;Dir=sensecoverage=100.0;identity=99.9;matches=674;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021302
Chr2	stalkie_big_nohaplotig	exon	124569128	124569604	99	-	.	Parent=FBgn0037433.3.mrna1;Target=FBgn0037433.3 199 675 +
Chr2	stalkie_big_nohaplotig	exon	124569655	124569852	100	-	.	Parent=FBgn0037433.3.mrna1;Target=FBgn0037433.3 1 198 +
Chr2	stalkie_big_nohaplotig	CDS	124569128	124569604	.	-	0	Parent=FBgn0037433.3.mrna1;Target=FBgn0037433.3 199 675 +
Chr2	stalkie_big_nohaplotig	CDS	124569655	124569852	.	-	0	Parent=FBgn0037433.3.mrna1;Target=FBgn0037433.3 1 198 +
Chr2	gffcl	locus	124571023	124571427	.	-	.	ID=RLOC_00021303;geneIDs=comp147323_c0_seq1.path1;transcripts=comp147323_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124571023	124571427	.	-	.	ID=comp147323_c0_seq1.mrna1;geneID=comp147323_c0_seq1.path1;Name=comp147323_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=355;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021303
Chr2	stalkie_big_nohaplotig	exon	124571023	124571052	100	-	.	Parent=comp147323_c0_seq1.mrna1;Target=comp147323_c0_seq1 326 355 +
Chr2	stalkie_big_nohaplotig	exon	124571103	124571427	100	-	.	Parent=comp147323_c0_seq1.mrna1;Target=comp147323_c0_seq1 1 325 +
Chr2	stalkie_big_nohaplotig	CDS	124571023	124571052	.	-	0	Parent=comp147323_c0_seq1.mrna1;Target=comp147323_c0_seq1 326 355 +
Chr2	stalkie_big_nohaplotig	CDS	124571103	124571261	.	-	0	Parent=comp147323_c0_seq1.mrna1;Target=comp147323_c0_seq1 167 325 +
Chr2	gffcl	locus	124573560	124575360	.	-	.	ID=RLOC_00021304;geneIDs=FBgn0051068.2.path1;transcripts=FBgn0051068.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124573560	124575360	.	-	.	ID=FBgn0051068.2.mrna1;geneID=FBgn0051068.2.path1;Name=FBgn0051068.2;Dir=sensecoverage=100.0;identity=100.0;matches=1728;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021304
Chr2	stalkie_big_nohaplotig	exon	124573560	124574822	100	-	.	Parent=FBgn0051068.2.mrna1;Target=FBgn0051068.2 466 1728 +
Chr2	stalkie_big_nohaplotig	exon	124574896	124575360	100	-	.	Parent=FBgn0051068.2.mrna1;Target=FBgn0051068.2 1 465 +
Chr2	stalkie_big_nohaplotig	CDS	124573560	124574822	.	-	0	Parent=FBgn0051068.2.mrna1;Target=FBgn0051068.2 466 1728 +
Chr2	stalkie_big_nohaplotig	CDS	124574896	124575360	.	-	0	Parent=FBgn0051068.2.mrna1;Target=FBgn0051068.2 1 465 +
Chr2	gffcl	locus	124576888	124577542	.	-	.	ID=RLOC_00021305;geneIDs=FBgn0037432.1.path1;transcripts=FBgn0037432.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124576888	124577542	.	-	.	ID=FBgn0037432.1.mrna1;geneID=FBgn0037432.1.path1;Name=FBgn0037432.1;Dir=sensecoverage=100.0;identity=100.0;matches=600;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021305
Chr2	stalkie_big_nohaplotig	exon	124576888	124577361	100	-	.	Parent=FBgn0037432.1.mrna1;Target=FBgn0037432.1 127 600 +
Chr2	stalkie_big_nohaplotig	exon	124577417	124577542	100	-	.	Parent=FBgn0037432.1.mrna1;Target=FBgn0037432.1 1 126 +
Chr2	stalkie_big_nohaplotig	CDS	124576888	124577361	.	-	0	Parent=FBgn0037432.1.mrna1;Target=FBgn0037432.1 127 600 +
Chr2	stalkie_big_nohaplotig	CDS	124577417	124577542	.	-	0	Parent=FBgn0037432.1.mrna1;Target=FBgn0037432.1 1 126 +
Chr2	gffcl	locus	124579179	124579857	.	-	.	ID=RLOC_00021306;geneIDs=FBgn0037432.2.path1;transcripts=FBgn0037432.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124579179	124579857	.	-	.	ID=FBgn0037432.2.mrna1;geneID=FBgn0037432.2.path1;Name=FBgn0037432.2;Dir=sensecoverage=100.0;identity=100.0;matches=615;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021306
Chr2	stalkie_big_nohaplotig	exon	124579179	124579652	100	-	.	Parent=FBgn0037432.2.mrna1;Target=FBgn0037432.2 142 615 +
Chr2	stalkie_big_nohaplotig	exon	124579717	124579857	100	-	.	Parent=FBgn0037432.2.mrna1;Target=FBgn0037432.2 1 141 +
Chr2	stalkie_big_nohaplotig	CDS	124579179	124579652	.	-	0	Parent=FBgn0037432.2.mrna1;Target=FBgn0037432.2 142 615 +
Chr2	stalkie_big_nohaplotig	CDS	124579717	124579857	.	-	0	Parent=FBgn0037432.2.mrna1;Target=FBgn0037432.2 1 141 +
Chr2	gffcl	locus	124581675	124582383	.	-	.	ID=RLOC_00021307;geneIDs=FBgn0037433.2.path1;transcripts=FBgn0037433.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124581675	124582383	.	-	.	ID=FBgn0037433.2.mrna1;geneID=FBgn0037433.2.path1;Name=FBgn0037433.2;Dir=sensecoverage=100.0;identity=99.2;matches=646;mismatches=5;indels=0;unknowns=0;locus=RLOC_00021307
Chr2	stalkie_big_nohaplotig	exon	124581675	124582151	98	-	.	Parent=FBgn0037433.2.mrna1;Target=FBgn0037433.2 175 651 +
Chr2	stalkie_big_nohaplotig	exon	124582210	124582383	100	-	.	Parent=FBgn0037433.2.mrna1;Target=FBgn0037433.2 1 174 +
Chr2	stalkie_big_nohaplotig	CDS	124581675	124582151	.	-	0	Parent=FBgn0037433.2.mrna1;Target=FBgn0037433.2 175 651 +
Chr2	stalkie_big_nohaplotig	CDS	124582210	124582383	.	-	0	Parent=FBgn0037433.2.mrna1;Target=FBgn0037433.2 1 174 +
Chr2	gffcl	locus	124583908	124584837	.	-	.	ID=RLOC_00021308;geneIDs=comp150794_c0_seq1.path1;transcripts=comp150794_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124583908	124584837	.	-	.	ID=comp150794_c0_seq1.mrna1;geneID=comp150794_c0_seq1.path1;Name=comp150794_c0_seq1;Dir=antisensecoverage=99.9;identity=99.8;matches=866;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021308
Chr2	stalkie_big_nohaplotig	exon	124583908	124584526	99	-	.	Parent=comp150794_c0_seq1.mrna1;Target=comp150794_c0_seq1 1 619 -
Chr2	stalkie_big_nohaplotig	exon	124584589	124584837	100	-	.	Parent=comp150794_c0_seq1.mrna1;Target=comp150794_c0_seq1 620 868 -
Chr2	stalkie_big_nohaplotig	CDS	124584187	124584526	.	-	1	Parent=comp150794_c0_seq1.mrna1;Target=comp150794_c0_seq1 280 619 .
Chr2	stalkie_big_nohaplotig	CDS	124584589	124584689	.	-	0	Parent=comp150794_c0_seq1.mrna1;Target=comp150794_c0_seq1 620 720 .
Chr2	gffcl	locus	124698403	124699432	.	+	.	ID=RLOC_00021309;geneIDs=FBgn0026250.2.path2;transcripts=FBgn0026250.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	124698403	124699432	.	+	.	ID=FBgn0026250.2.mrna2;geneID=FBgn0026250.2.path2;Name=FBgn0026250.2;Dir=sensecoverage=100.0;identity=99.6;matches=490;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021309
Chr2	stalkie_big_nohaplotig	exon	124698403	124698432	96	+	.	Parent=FBgn0026250.2.mrna2;Target=FBgn0026250.2 1 30 +
Chr2	stalkie_big_nohaplotig	exon	124698546	124698758	100	+	.	Parent=FBgn0026250.2.mrna2;Target=FBgn0026250.2 31 243 +
Chr2	stalkie_big_nohaplotig	exon	124699184	124699432	99	+	.	Parent=FBgn0026250.2.mrna2;Target=FBgn0026250.2 244 492 +
Chr2	stalkie_big_nohaplotig	CDS	124698403	124698432	.	+	0	Parent=FBgn0026250.2.mrna2;Target=FBgn0026250.2 1 30 +
Chr2	stalkie_big_nohaplotig	CDS	124698546	124698758	.	+	0	Parent=FBgn0026250.2.mrna2;Target=FBgn0026250.2 31 243 +
Chr2	stalkie_big_nohaplotig	CDS	124699184	124699432	.	+	0	Parent=FBgn0026250.2.mrna2;Target=FBgn0026250.2 244 492 +
Chr2	gffcl	locus	124799443	124800466	.	-	.	ID=RLOC_00021310;geneIDs=FBgn0026250.2.path1;transcripts=FBgn0026250.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124799443	124800466	.	-	.	ID=FBgn0026250.2.mrna1;geneID=FBgn0026250.2.path1;Name=FBgn0026250.2;Dir=sensecoverage=98.8;identity=100.0;matches=486;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021310
Chr2	stalkie_big_nohaplotig	exon	124799443	124799691	100	-	.	Parent=FBgn0026250.2.mrna1;Target=FBgn0026250.2 244 492 +
Chr2	stalkie_big_nohaplotig	exon	124800117	124800329	100	-	.	Parent=FBgn0026250.2.mrna1;Target=FBgn0026250.2 31 243 +
Chr2	stalkie_big_nohaplotig	exon	124800443	124800466	100	-	.	Parent=FBgn0026250.2.mrna1;Target=FBgn0026250.2 7 30 +
Chr2	stalkie_big_nohaplotig	CDS	124799443	124799691	.	-	0	Parent=FBgn0026250.2.mrna1;Target=FBgn0026250.2 244 492 +
Chr2	stalkie_big_nohaplotig	CDS	124800117	124800329	.	-	0	Parent=FBgn0026250.2.mrna1;Target=FBgn0026250.2 31 243 +
Chr2	stalkie_big_nohaplotig	CDS	124800443	124800466	.	-	0	Parent=FBgn0026250.2.mrna1;Target=FBgn0026250.2 7 30 +
Chr2	gffcl	locus	124819259	124821758	.	-	.	ID=RLOC_00021311;geneIDs=comp155972_c0_seq1.path1;transcripts=comp155972_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124819259	124821758	.	-	.	ID=comp155972_c0_seq1.mrna1;geneID=comp155972_c0_seq1.path1;Name=comp155972_c0_seq1;Dir=antisensecoverage=99.9;identity=99.8;matches=1612;mismatches=1;indels=3;unknowns=0;Target=comp155972_c0_seq1 864 1343 .;locus=RLOC_00021311
Chr2	stalkie_big_nohaplotig	exon	124819259	124820609	99	-	.	Parent=comp155972_c0_seq1.mrna1;Target=comp155972_c0_seq1 1 1354 -
Chr2	stalkie_big_nohaplotig	exon	124821497	124821758	100	-	.	Parent=comp155972_c0_seq1.mrna1;Target=comp155972_c0_seq1 1355 1616 -
Chr2	stalkie_big_nohaplotig	CDS	124820122	124820598	.	-	0	Parent=comp155972_c0_seq1.mrna1
Chr2	gffcl	locus	124867552	124868310	.	-	.	ID=RLOC_00021312;geneIDs=comp149867_c0_seq1.path1;transcripts=comp149867_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124867552	124868310	.	-	.	ID=comp149867_c0_seq1.mrna1;geneID=comp149867_c0_seq1.path1;Name=comp149867_c0_seq1;Dir=sensecoverage=99.7;identity=98.6;matches=638;mismatches=2;indels=7;unknowns=0;locus=RLOC_00021312
Chr2	stalkie_big_nohaplotig	exon	124867552	124867966	97	-	.	Parent=comp149867_c0_seq1.mrna1;Target=comp149867_c0_seq1 226 647 +
Chr2	stalkie_big_nohaplotig	exon	124868026	124868166	100	-	.	Parent=comp149867_c0_seq1.mrna1;Target=comp149867_c0_seq1 85 225 +
Chr2	stalkie_big_nohaplotig	exon	124868227	124868310	100	-	.	Parent=comp149867_c0_seq1.mrna1;Target=comp149867_c0_seq1 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	124867677	124867966	.	-	0	Parent=comp149867_c0_seq1.mrna1;Target=comp149867_c0_seq1 226 522 +
Chr2	stalkie_big_nohaplotig	CDS	124868026	124868097	.	-	0	Parent=comp149867_c0_seq1.mrna1;Target=comp149867_c0_seq1 154 225 +
Chr2	gffcl	locus	124909502	124911063	.	-	.	ID=RLOC_00021313;geneIDs=FBgn0037410.1.path1;transcripts=FBgn0037410.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124909502	124911063	.	-	.	ID=FBgn0037410.1.mrna1;geneID=FBgn0037410.1.path1;Name=FBgn0037410.1;Dir=sensecoverage=100.0;identity=100.0;matches=1002;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021313
Chr2	stalkie_big_nohaplotig	exon	124909502	124909992	100	-	.	Parent=FBgn0037410.1.mrna1;Target=FBgn0037410.1 512 1002 +
Chr2	stalkie_big_nohaplotig	exon	124910089	124910225	100	-	.	Parent=FBgn0037410.1.mrna1;Target=FBgn0037410.1 375 511 +
Chr2	stalkie_big_nohaplotig	exon	124910621	124910767	100	-	.	Parent=FBgn0037410.1.mrna1;Target=FBgn0037410.1 228 374 +
Chr2	stalkie_big_nohaplotig	exon	124910837	124911063	100	-	.	Parent=FBgn0037410.1.mrna1;Target=FBgn0037410.1 1 227 +
Chr2	stalkie_big_nohaplotig	CDS	124909502	124909992	.	-	2	Parent=FBgn0037410.1.mrna1;Target=FBgn0037410.1 512 1002 +
Chr2	stalkie_big_nohaplotig	CDS	124910089	124910225	.	-	1	Parent=FBgn0037410.1.mrna1;Target=FBgn0037410.1 375 511 +
Chr2	stalkie_big_nohaplotig	CDS	124910621	124910767	.	-	1	Parent=FBgn0037410.1.mrna1;Target=FBgn0037410.1 228 374 +
Chr2	stalkie_big_nohaplotig	CDS	124910837	124911063	.	-	0	Parent=FBgn0037410.1.mrna1;Target=FBgn0037410.1 1 227 +
Chr2	gffcl	locus	124911108	124916470	.	-	.	ID=RLOC_00021314;geneIDs=comp100853_c0_seq1.path1;transcripts=comp100853_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124911108	124916470	.	-	.	ID=comp100853_c0_seq1.mrna1;geneID=comp100853_c0_seq1.path1;Name=comp100853_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=288;mismatches=0;indels=0;unknowns=0;Target=comp100853_c0_seq1 2 130 .;locus=RLOC_00021314
Chr2	stalkie_big_nohaplotig	exon	124911108	124911239	100	-	.	Parent=comp100853_c0_seq1.mrna1;Target=comp100853_c0_seq1 1 132 -
Chr2	stalkie_big_nohaplotig	exon	124916315	124916470	100	-	.	Parent=comp100853_c0_seq1.mrna1;Target=comp100853_c0_seq1 133 288 -
Chr2	stalkie_big_nohaplotig	CDS	124911109	124911237	.	-	0	Parent=comp100853_c0_seq1.mrna1
Chr2	gffcl	locus	124933653	124939647	.	-	.	ID=RLOC_00021316;geneIDs=FBgn0037409.1.path1;transcripts=FBgn0037409.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124933653	124939647	.	-	.	ID=FBgn0037409.1.mrna1;geneID=FBgn0037409.1.path1;Name=FBgn0037409.1;Dir=sensecoverage=100.0;identity=100.0;matches=2073;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021316
Chr2	stalkie_big_nohaplotig	exon	124933653	124933860	100	-	.	Parent=FBgn0037409.1.mrna1;Target=FBgn0037409.1 1866 2073 +
Chr2	stalkie_big_nohaplotig	exon	124936056	124936491	100	-	.	Parent=FBgn0037409.1.mrna1;Target=FBgn0037409.1 1430 1865 +
Chr2	stalkie_big_nohaplotig	exon	124936576	124936731	100	-	.	Parent=FBgn0037409.1.mrna1;Target=FBgn0037409.1 1274 1429 +
Chr2	stalkie_big_nohaplotig	exon	124938212	124938325	100	-	.	Parent=FBgn0037409.1.mrna1;Target=FBgn0037409.1 1160 1273 +
Chr2	stalkie_big_nohaplotig	exon	124938489	124939647	100	-	.	Parent=FBgn0037409.1.mrna1;Target=FBgn0037409.1 1 1159 +
Chr2	stalkie_big_nohaplotig	CDS	124933653	124933860	.	-	1	Parent=FBgn0037409.1.mrna1;Target=FBgn0037409.1 1866 2073 +
Chr2	stalkie_big_nohaplotig	CDS	124936056	124936491	.	-	2	Parent=FBgn0037409.1.mrna1;Target=FBgn0037409.1 1430 1865 +
Chr2	stalkie_big_nohaplotig	CDS	124936576	124936731	.	-	2	Parent=FBgn0037409.1.mrna1;Target=FBgn0037409.1 1274 1429 +
Chr2	stalkie_big_nohaplotig	CDS	124938212	124938325	.	-	2	Parent=FBgn0037409.1.mrna1;Target=FBgn0037409.1 1160 1273 +
Chr2	stalkie_big_nohaplotig	CDS	124938489	124939647	.	-	0	Parent=FBgn0037409.1.mrna1;Target=FBgn0037409.1 1 1159 +
Chr2	gffcl	locus	124996449	125004838	.	-	.	ID=RLOC_00021317;geneIDs=FBgn0037408.1.path1;transcripts=FBgn0037408.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	124996449	125004838	.	-	.	ID=FBgn0037408.1.mrna1;geneID=FBgn0037408.1.path1;Name=FBgn0037408.1;Dir=sensecoverage=92.1;identity=99.6;matches=1401;mismatches=6;indels=0;unknowns=0;locus=RLOC_00021317
Chr2	stalkie_big_nohaplotig	exon	124996449	124996461	100	-	.	Parent=FBgn0037408.1.mrna1;Target=FBgn0037408.1 1515 1527 +
Chr2	stalkie_big_nohaplotig	exon	124997478	124998337	99	-	.	Parent=FBgn0037408.1.mrna1;Target=FBgn0037408.1 655 1514 +
Chr2	stalkie_big_nohaplotig	exon	125004033	125004202	100	-	.	Parent=FBgn0037408.1.mrna1;Target=FBgn0037408.1 485 654 +
Chr2	stalkie_big_nohaplotig	exon	125004475	125004838	99	-	.	Parent=FBgn0037408.1.mrna1;Target=FBgn0037408.1 121 484 +
Chr2	stalkie_big_nohaplotig	CDS	124996449	124996461	.	-	1	Parent=FBgn0037408.1.mrna1;Target=FBgn0037408.1 1515 1527 +
Chr2	stalkie_big_nohaplotig	CDS	124997478	124998337	.	-	0	Parent=FBgn0037408.1.mrna1;Target=FBgn0037408.1 655 1514 +
Chr2	stalkie_big_nohaplotig	CDS	125004033	125004202	.	-	2	Parent=FBgn0037408.1.mrna1;Target=FBgn0037408.1 485 654 +
Chr2	stalkie_big_nohaplotig	CDS	125004475	125004838	.	-	0	Parent=FBgn0037408.1.mrna1;Target=FBgn0037408.1 121 484 +
Chr2	gffcl	locus	125043117	125046718	.	+	.	ID=RLOC_00021318;geneIDs=FBgn0027527.1.path1;transcripts=FBgn0027527.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125043117	125046718	.	+	.	ID=FBgn0027527.1.mrna1;geneID=FBgn0027527.1.path1;Name=FBgn0027527.1;Dir=sensecoverage=100.0;identity=99.8;matches=895;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021318
Chr2	stalkie_big_nohaplotig	exon	125043117	125043299	100	+	.	Parent=FBgn0027527.1.mrna1;Target=FBgn0027527.1 1 183 +
Chr2	stalkie_big_nohaplotig	exon	125046005	125046718	99	+	.	Parent=FBgn0027527.1.mrna1;Target=FBgn0027527.1 184 897 +
Chr2	stalkie_big_nohaplotig	CDS	125043117	125043299	.	+	0	Parent=FBgn0027527.1.mrna1;Target=FBgn0027527.1 1 183 +
Chr2	stalkie_big_nohaplotig	CDS	125046005	125046718	.	+	0	Parent=FBgn0027527.1.mrna1;Target=FBgn0027527.1 184 897 +
Chr2	gffcl	locus	125047913	125048373	.	+	.	ID=RLOC_00021319;geneIDs=comp114295_c0_seq1.path1;transcripts=comp114295_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125047913	125048373	.	+	.	ID=comp114295_c0_seq1.mrna1;geneID=comp114295_c0_seq1.path1;Name=comp114295_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=460;mismatches=1;indels=0;unknowns=0;Target=comp114295_c0_seq1 461 1 .;CDS_Target=comp114295_c0_seq1 309 46 .;locus=RLOC_00021319
Chr2	stalkie_big_nohaplotig	exon	125047913	125048373	99	+	.	Parent=comp114295_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125047958	125048221	.	+	0	Parent=comp114295_c0_seq1.mrna1
Chr2	gffcl	locus	125113008	125122388	.	-	.	ID=RLOC_00021320;geneIDs=FBgn0037416.1.path1;transcripts=FBgn0037416.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125113008	125122388	.	-	.	ID=FBgn0037416.1.mrna1;geneID=FBgn0037416.1.path1;Name=FBgn0037416.1;Dir=sensecoverage=100.0;identity=99.9;matches=773;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021320
Chr2	stalkie_big_nohaplotig	exon	125113008	125113306	100	-	.	Parent=FBgn0037416.1.mrna1;Target=FBgn0037416.1 476 774 +
Chr2	stalkie_big_nohaplotig	exon	125119625	125119880	99	-	.	Parent=FBgn0037416.1.mrna1;Target=FBgn0037416.1 220 475 +
Chr2	stalkie_big_nohaplotig	exon	125122170	125122388	100	-	.	Parent=FBgn0037416.1.mrna1;Target=FBgn0037416.1 1 219 +
Chr2	stalkie_big_nohaplotig	CDS	125113008	125113306	.	-	2	Parent=FBgn0037416.1.mrna1;Target=FBgn0037416.1 476 774 +
Chr2	stalkie_big_nohaplotig	CDS	125119625	125119880	.	-	0	Parent=FBgn0037416.1.mrna1;Target=FBgn0037416.1 220 475 +
Chr2	stalkie_big_nohaplotig	CDS	125122170	125122388	.	-	0	Parent=FBgn0037416.1.mrna1;Target=FBgn0037416.1 1 219 +
Chr2	gffcl	locus	125180891	125181781	.	+	.	ID=RLOC_00021321;geneIDs=FBgn0037414.1.path1;transcripts=FBgn0037414.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125180891	125181781	.	+	.	ID=FBgn0037414.1.mrna1;geneID=FBgn0037414.1.path1;Name=FBgn0037414.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=890;mismatches=1;indels=0;unknowns=0;Target=FBgn0037414.1 891 1 .;locus=RLOC_00021321
Chr2	stalkie_big_nohaplotig	exon	125180891	125181781	99	+	.	Parent=FBgn0037414.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125180891	125181781	.	+	0	Parent=FBgn0037414.1.mrna1
Chr2	gffcl	locus	125182562	125183385	.	+	.	ID=RLOC_00021322;geneIDs=comp79918_c0_seq1.path1;transcripts=comp79918_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125182562	125183385	.	+	.	ID=comp79918_c0_seq1.mrna1;geneID=comp79918_c0_seq1.path1;Name=comp79918_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=823;mismatches=1;indels=0;unknowns=0;Target=comp79918_c0_seq1 825 2 .;CDS_Target=comp79918_c0_seq1 661 368 .;locus=RLOC_00021322
Chr2	stalkie_big_nohaplotig	exon	125182562	125183385	99	+	.	Parent=comp79918_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125182928	125183221	.	+	0	Parent=comp79918_c0_seq1.mrna1
Chr2	gffcl	locus	125235516	125235955	.	-	.	ID=RLOC_00021323;geneIDs=comp148796_c0_seq1.path1;transcripts=comp148796_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125235516	125235955	.	-	.	ID=comp148796_c0_seq1.mrna1;geneID=comp148796_c0_seq1.path1;Name=comp148796_c0_seq1;Dir=indeterminatecoverage=98.2;identity=98.9;matches=435;mismatches=5;indels=0;unknowns=0;Target=comp148796_c0_seq1 442 3 .;CDS_Target=comp148796_c0_seq1 361 53 .;locus=RLOC_00021323
Chr2	stalkie_big_nohaplotig	exon	125235516	125235955	98	-	.	Parent=comp148796_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125235597	125235905	.	-	0	Parent=comp148796_c0_seq1.mrna1
Chr2	gffcl	locus	125253509	125257094	.	+	.	ID=RLOC_00021324;geneIDs=FBgn0039427.1.path1;transcripts=FBgn0039427.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125253509	125257094	.	+	.	ID=FBgn0039427.1.mrna1;geneID=FBgn0039427.1.path1;Name=FBgn0039427.1;Dir=sensecoverage=100.0;identity=99.8;matches=476;mismatches=0;indels=1;unknowns=0;locus=RLOC_00021324
Chr2	stalkie_big_nohaplotig	exon	125253509	125253566	98	+	.	Parent=FBgn0039427.1.mrna1;Target=FBgn0039427.1 1 59 +
Chr2	stalkie_big_nohaplotig	exon	125253763	125253889	100	+	.	Parent=FBgn0039427.1.mrna1;Target=FBgn0039427.1 60 186 +
Chr2	stalkie_big_nohaplotig	exon	125253986	125254138	100	+	.	Parent=FBgn0039427.1.mrna1;Target=FBgn0039427.1 187 339 +
Chr2	stalkie_big_nohaplotig	exon	125256957	125257094	100	+	.	Parent=FBgn0039427.1.mrna1;Target=FBgn0039427.1 340 477 +
Chr2	stalkie_big_nohaplotig	CDS	125253776	125253889	.	+	0	Parent=FBgn0039427.1.mrna1;Target=FBgn0039427.1 73 186 +
Chr2	stalkie_big_nohaplotig	CDS	125253986	125254138	.	+	0	Parent=FBgn0039427.1.mrna1;Target=FBgn0039427.1 187 339 +
Chr2	stalkie_big_nohaplotig	CDS	125256957	125257094	.	+	0	Parent=FBgn0039427.1.mrna1;Target=FBgn0039427.1 340 477 +
Chr2	gffcl	locus	125259991	125261517	.	+	.	ID=RLOC_00021325;geneIDs=AAEL012638.3.path1,Dv_FBgn0201266.10.path1;transcripts=Dv_FBgn0201266.10.mrna1,AAEL012638.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125259991	125260765	.	+	.	ID=Dv_FBgn0201266.10.mrna1;geneID=Dv_FBgn0201266.10.path1;Name=Dv_FBgn0201266.10;Dir=sensecoverage=99.8;identity=98.6;matches=633;mismatches=9;indels=0;unknowns=2;locus=RLOC_00021325
Chr2	stalkie_big_nohaplotig	exon	125259991	125260390	98	+	.	Parent=Dv_FBgn0201266.10.mrna1;Target=Dv_FBgn0201266.10 1 400 +
Chr2	stalkie_big_nohaplotig	exon	125260455	125260557	100	+	.	Parent=Dv_FBgn0201266.10.mrna1;Target=Dv_FBgn0201266.10 401 503 +
Chr2	stalkie_big_nohaplotig	exon	125260625	125260765	99	+	.	Parent=Dv_FBgn0201266.10.mrna1;Target=Dv_FBgn0201266.10 504 644 +
Chr2	stalkie_big_nohaplotig	CDS	125259991	125260390	.	+	0	Parent=Dv_FBgn0201266.10.mrna1;Target=Dv_FBgn0201266.10 1 400 +
Chr2	stalkie_big_nohaplotig	CDS	125260455	125260557	.	+	2	Parent=Dv_FBgn0201266.10.mrna1;Target=Dv_FBgn0201266.10 401 503 +
Chr2	stalkie_big_nohaplotig	CDS	125260625	125260763	.	+	1	Parent=Dv_FBgn0201266.10.mrna1;Target=Dv_FBgn0201266.10 504 642 +
Chr2	stalkie_big_nohaplotig	mRNA	125260747	125261517	.	+	.	ID=AAEL012638.3.mrna1;geneID=AAEL012638.3.path1;Name=AAEL012638.3;Dir=sensecoverage=99.8;identity=99.8;matches=508;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021325
Chr2	stalkie_big_nohaplotig	exon	125260747	125261169	99	+	.	Parent=AAEL012638.3.mrna1;Target=AAEL012638.3 2 424 +
Chr2	stalkie_big_nohaplotig	exon	125261432	125261517	100	+	.	Parent=AAEL012638.3.mrna1;Target=AAEL012638.3 425 510 +
Chr2	stalkie_big_nohaplotig	CDS	125260749	125261169	.	+	0	Parent=AAEL012638.3.mrna1;Target=AAEL012638.3 4 424 +
Chr2	stalkie_big_nohaplotig	CDS	125261432	125261517	.	+	2	Parent=AAEL012638.3.mrna1;Target=AAEL012638.3 425 510 +
Chr2	gffcl	locus	125263143	125263661	.	+	.	ID=RLOC_00021326;geneIDs=comp149306_c0_seq1.path1;transcripts=comp149306_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125263143	125263661	.	+	.	ID=comp149306_c0_seq1.mrna1;geneID=comp149306_c0_seq1.path1;Name=comp149306_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=518;mismatches=1;indels=0;unknowns=0;Target=comp149306_c0_seq1 519 1 .;CDS_Target=comp149306_c0_seq1 443 39 .;locus=RLOC_00021326
Chr2	stalkie_big_nohaplotig	exon	125263143	125263661	99	+	.	Parent=comp149306_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125263181	125263585	.	+	0	Parent=comp149306_c0_seq1.mrna1
Chr2	gffcl	locus	125269809	125270550	.	.	.	ID=RLOC_00021327;geneIDs=comp114206_c0_seq1.path1,comp129800_c0_seq1.path1;transcripts=comp114206_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125270175	125270550	.	+	.	ID=comp114206_c0_seq1.mrna1;geneID=comp114206_c0_seq1.path1;Name=comp114206_c0_seq1;Dir=antisensecoverage=100.0;identity=96.2;matches=304;mismatches=11;indels=1;unknowns=0;Target=comp114206_c0_seq1 3 89 .;locus=RLOC_00021327
Chr2	stalkie_big_nohaplotig	exon	125270175	125270198	100	+	.	Parent=comp114206_c0_seq1.mrna1;Target=comp114206_c0_seq1 293 316 -
Chr2	stalkie_big_nohaplotig	exon	125270260	125270550	95	+	.	Parent=comp114206_c0_seq1.mrna1;Target=comp114206_c0_seq1 1 292 -
Chr2	stalkie_big_nohaplotig	CDS	125270463	125270548	.	+	0	Parent=comp114206_c0_seq1.mrna1
Chr2	gffcl	locus	125273499	125274449	.	+	.	ID=RLOC_00021328;geneIDs=comp161009_c0_seq1.path1;transcripts=comp161009_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125273499	125274449	.	+	.	ID=comp161009_c0_seq1.mrna1;geneID=comp161009_c0_seq1.path1;Name=comp161009_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.6;matches=949;mismatches=2;indels=2;unknowns=0;Target=comp161009_c0_seq1 953 1 .;CDS_Target=comp161009_c0_seq1 784 701 .;locus=RLOC_00021328
Chr2	stalkie_big_nohaplotig	exon	125273499	125274449	99	+	.	Parent=comp161009_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125274197	125274280	.	+	0	Parent=comp161009_c0_seq1.mrna1
Chr2	gffcl	locus	125290803	125291219	.	+	.	ID=RLOC_00021330;geneIDs=FBgn0013347.2.path1;transcripts=FBgn0013347.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125290803	125291219	.	+	.	ID=FBgn0013347.2.mrna1;geneID=FBgn0013347.2.path1;Name=FBgn0013347.2;Dir=sensecoverage=100.0;identity=100.0;matches=357;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021330
Chr2	stalkie_big_nohaplotig	exon	125290803	125290886	100	+	.	Parent=FBgn0013347.2.mrna1;Target=FBgn0013347.2 1 84 +
Chr2	stalkie_big_nohaplotig	exon	125290947	125291219	100	+	.	Parent=FBgn0013347.2.mrna1;Target=FBgn0013347.2 85 357 +
Chr2	stalkie_big_nohaplotig	CDS	125290803	125290886	.	+	0	Parent=FBgn0013347.2.mrna1;Target=FBgn0013347.2 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	125290947	125291219	.	+	0	Parent=FBgn0013347.2.mrna1;Target=FBgn0013347.2 85 357 +
Chr2	gffcl	locus	125405484	125406210	.	-	.	ID=RLOC_00021332;geneIDs=comp147118_c0_seq1.path1;transcripts=comp147118_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125405484	125406210	.	-	.	ID=comp147118_c0_seq1.mrna1;geneID=comp147118_c0_seq1.path1;Name=comp147118_c0_seq1;Dir=antisensecoverage=99.8;identity=99.8;matches=540;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021332
Chr2	stalkie_big_nohaplotig	exon	125405484	125405837	100	-	.	Parent=comp147118_c0_seq1.mrna1;Target=comp147118_c0_seq1 2 355 -
Chr2	stalkie_big_nohaplotig	exon	125405909	125405973	100	-	.	Parent=comp147118_c0_seq1.mrna1;Target=comp147118_c0_seq1 356 420 -
Chr2	stalkie_big_nohaplotig	exon	125406089	125406210	99	-	.	Parent=comp147118_c0_seq1.mrna1;Target=comp147118_c0_seq1 421 542 -
Chr2	stalkie_big_nohaplotig	CDS	125405654	125405837	.	-	1	Parent=comp147118_c0_seq1.mrna1;Target=comp147118_c0_seq1 172 355 .
Chr2	stalkie_big_nohaplotig	CDS	125405909	125405973	.	-	0	Parent=comp147118_c0_seq1.mrna1;Target=comp147118_c0_seq1 356 420 .
Chr2	stalkie_big_nohaplotig	CDS	125406089	125406208	.	-	0	Parent=comp147118_c0_seq1.mrna1;Target=comp147118_c0_seq1 421 540 .
Chr2	gffcl	locus	125411195	125412146	.	-	.	ID=RLOC_00021333;geneIDs=comp135533_c0_seq1.path1;transcripts=comp135533_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125411195	125412146	.	-	.	ID=comp135533_c0_seq1.mrna1;geneID=comp135533_c0_seq1.path1;Name=comp135533_c0_seq1;Dir=sensecoverage=97.3;identity=100.0;matches=783;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021333
Chr2	stalkie_big_nohaplotig	exon	125411195	125411526	100	-	.	Parent=comp135533_c0_seq1.mrna1;Target=comp135533_c0_seq1 457 788 +
Chr2	stalkie_big_nohaplotig	exon	125411593	125411702	100	-	.	Parent=comp135533_c0_seq1.mrna1;Target=comp135533_c0_seq1 347 456 +
Chr2	stalkie_big_nohaplotig	exon	125411806	125412146	100	-	.	Parent=comp135533_c0_seq1.mrna1;Target=comp135533_c0_seq1 6 346 +
Chr2	stalkie_big_nohaplotig	CDS	125411334	125411526	.	-	1	Parent=comp135533_c0_seq1.mrna1;Target=comp135533_c0_seq1 457 649 +
Chr2	stalkie_big_nohaplotig	CDS	125411593	125411702	.	-	0	Parent=comp135533_c0_seq1.mrna1;Target=comp135533_c0_seq1 347 456 +
Chr2	stalkie_big_nohaplotig	CDS	125411806	125411871	.	-	0	Parent=comp135533_c0_seq1.mrna1;Target=comp135533_c0_seq1 281 346 +
Chr2	gffcl	locus	125415658	125418058	.	-	.	ID=RLOC_00021334;geneIDs=comp135334_c0_seq1.path1,comp149009_c0_seq1.path1;transcripts=comp149009_c0_seq1.mrna1,comp135334_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125415658	125418058	.	-	.	ID=comp149009_c0_seq1.mrna1;geneID=comp149009_c0_seq1.path1;Name=comp149009_c0_seq1;Dir=antisensecoverage=97.9;identity=100.0;matches=1237;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021334
Chr2	stalkie_big_nohaplotig	exon	125415658	125416663	100	-	.	Parent=comp149009_c0_seq1.mrna1;Target=comp149009_c0_seq1 1 1006 -
Chr2	stalkie_big_nohaplotig	exon	125417736	125417848	100	-	.	Parent=comp149009_c0_seq1.mrna1;Target=comp149009_c0_seq1 1007 1119 -
Chr2	stalkie_big_nohaplotig	exon	125417941	125418058	100	-	.	Parent=comp149009_c0_seq1.mrna1;Target=comp149009_c0_seq1 1120 1237 -
Chr2	stalkie_big_nohaplotig	CDS	125416477	125416663	.	-	1	Parent=comp149009_c0_seq1.mrna1;Target=comp149009_c0_seq1 820 1006 .
Chr2	stalkie_big_nohaplotig	CDS	125417736	125417848	.	-	0	Parent=comp149009_c0_seq1.mrna1;Target=comp149009_c0_seq1 1007 1119 .
Chr2	stalkie_big_nohaplotig	CDS	125417941	125418003	.	-	0	Parent=comp149009_c0_seq1.mrna1;Target=comp149009_c0_seq1 1120 1182 .
Chr2	stalkie_big_nohaplotig	mRNA	125416642	125417266	.	-	.	ID=comp135334_c0_seq1.mrna1;geneID=comp135334_c0_seq1.path1;Name=comp135334_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=625;mismatches=0;indels=0;unknowns=0;Target=comp135334_c0_seq1 625 1 .;CDS_Target=comp135334_c0_seq1 271 200 .;locus=RLOC_00021334
Chr2	stalkie_big_nohaplotig	exon	125416642	125417266	100	-	.	Parent=comp135334_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125416996	125417067	.	-	0	Parent=comp135334_c0_seq1.mrna1
Chr2	gffcl	locus	125422946	125423943	.	-	.	ID=RLOC_00021335;geneIDs=FBgn0030105.3.path1;transcripts=FBgn0030105.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125422946	125423943	.	-	.	ID=FBgn0030105.3.mrna1;geneID=FBgn0030105.3.path1;Name=FBgn0030105.3;Dir=sensecoverage=100.0;identity=100.0;matches=414;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021335
Chr2	stalkie_big_nohaplotig	exon	125422946	125423141	100	-	.	Parent=FBgn0030105.3.mrna1;Target=FBgn0030105.3 219 414 +
Chr2	stalkie_big_nohaplotig	exon	125423207	125423316	100	-	.	Parent=FBgn0030105.3.mrna1;Target=FBgn0030105.3 109 218 +
Chr2	stalkie_big_nohaplotig	exon	125423836	125423943	100	-	.	Parent=FBgn0030105.3.mrna1;Target=FBgn0030105.3 1 108 +
Chr2	stalkie_big_nohaplotig	CDS	125422946	125423141	.	-	1	Parent=FBgn0030105.3.mrna1;Target=FBgn0030105.3 219 414 +
Chr2	stalkie_big_nohaplotig	CDS	125423207	125423316	.	-	0	Parent=FBgn0030105.3.mrna1;Target=FBgn0030105.3 109 218 +
Chr2	stalkie_big_nohaplotig	CDS	125423836	125423943	.	-	0	Parent=FBgn0030105.3.mrna1;Target=FBgn0030105.3 1 108 +
Chr2	gffcl	locus	125426288	125426655	.	-	.	ID=RLOC_00021336;geneIDs=comp116624_c0_seq1.path1;transcripts=comp116624_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125426288	125426655	.	-	.	ID=comp116624_c0_seq1.mrna1;geneID=comp116624_c0_seq1.path1;Name=comp116624_c0_seq1;Dir=antisensecoverage=97.9;identity=98.7;matches=227;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021336
Chr2	stalkie_big_nohaplotig	exon	125426288	125426398	99	-	.	Parent=comp116624_c0_seq1.mrna1;Target=comp116624_c0_seq1 6 116 -
Chr2	stalkie_big_nohaplotig	exon	125426537	125426655	98	-	.	Parent=comp116624_c0_seq1.mrna1;Target=comp116624_c0_seq1 117 235 -
Chr2	stalkie_big_nohaplotig	CDS	125426288	125426398	.	-	0	Parent=comp116624_c0_seq1.mrna1;Target=comp116624_c0_seq1 6 116 .
Chr2	stalkie_big_nohaplotig	CDS	125426537	125426593	.	-	0	Parent=comp116624_c0_seq1.mrna1;Target=comp116624_c0_seq1 117 173 .
Chr2	gffcl	locus	125429856	125430481	.	+	.	ID=RLOC_00021337;geneIDs=FBgn0030105.2.path1;transcripts=FBgn0030105.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125429856	125430481	.	+	.	ID=FBgn0030105.2.mrna1;geneID=FBgn0030105.2.path1;Name=FBgn0030105.2;Dir=sensecoverage=100.0;identity=99.7;matches=374;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021337
Chr2	stalkie_big_nohaplotig	exon	125429856	125429924	100	+	.	Parent=FBgn0030105.2.mrna1;Target=FBgn0030105.2 1 69 +
Chr2	stalkie_big_nohaplotig	exon	125430087	125430196	100	+	.	Parent=FBgn0030105.2.mrna1;Target=FBgn0030105.2 70 179 +
Chr2	stalkie_big_nohaplotig	exon	125430286	125430481	99	+	.	Parent=FBgn0030105.2.mrna1;Target=FBgn0030105.2 180 375 +
Chr2	stalkie_big_nohaplotig	CDS	125429856	125429924	.	+	0	Parent=FBgn0030105.2.mrna1;Target=FBgn0030105.2 1 69 +
Chr2	stalkie_big_nohaplotig	CDS	125430087	125430196	.	+	0	Parent=FBgn0030105.2.mrna1;Target=FBgn0030105.2 70 179 +
Chr2	stalkie_big_nohaplotig	CDS	125430286	125430481	.	+	1	Parent=FBgn0030105.2.mrna1;Target=FBgn0030105.2 180 375 +
Chr2	gffcl	locus	125430737	125431102	.	+	.	ID=RLOC_00021338;geneIDs=comp138301_c1_seq1.path1;transcripts=comp138301_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125430737	125431102	.	+	.	ID=comp138301_c1_seq1.mrna1;geneID=comp138301_c1_seq1.path1;Name=comp138301_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=366;mismatches=0;indels=0;unknowns=0;Target=comp138301_c1_seq1 366 1 .;CDS_Target=comp138301_c1_seq1 54 1 .;locus=RLOC_00021338
Chr2	stalkie_big_nohaplotig	exon	125430737	125431102	100	+	.	Parent=comp138301_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125430737	125430790	.	+	0	Parent=comp138301_c1_seq1.mrna1
Chr2	gffcl	locus	125431611	125432482	.	-	.	ID=RLOC_00021339;geneIDs=comp144019_c0_seq1.path1;transcripts=comp144019_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125431611	125432482	.	-	.	ID=comp144019_c0_seq1.mrna1;geneID=comp144019_c0_seq1.path1;Name=comp144019_c0_seq1;Dir=antisensecoverage=95.7;identity=98.0;matches=801;mismatches=1;indels=15;unknowns=0;locus=RLOC_00021339
Chr2	stalkie_big_nohaplotig	exon	125431611	125432105	100	-	.	Parent=comp144019_c0_seq1.mrna1;Target=comp144019_c0_seq1 37 531 -
Chr2	stalkie_big_nohaplotig	exon	125432161	125432482	95	-	.	Parent=comp144019_c0_seq1.mrna1;Target=comp144019_c0_seq1 532 838 -
Chr2	stalkie_big_nohaplotig	CDS	125432004	125432105	.	-	0	Parent=comp144019_c0_seq1.mrna1;Target=comp144019_c0_seq1 430 531 .
Chr2	stalkie_big_nohaplotig	CDS	125432161	125432223	.	-	0	Parent=comp144019_c0_seq1.mrna1;Target=comp144019_c0_seq1 532 594 .
Chr2	gffcl	locus	125436536	125436677	.	-	.	ID=RLOC_00021340;geneIDs=comp116853_c0_seq1.path1;transcripts=comp116853_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125436536	125436677	.	-	.	ID=comp116853_c0_seq1.mrna1;geneID=comp116853_c0_seq1.path1;Name=comp116853_c0_seq1;Dir=indeterminatecoverage=58.2;identity=97.9;matches=139;mismatches=3;indels=0;unknowns=0;Target=comp116853_c0_seq1 142 1 .;CDS_Target=comp116853_c0_seq1 88 2 .;locus=RLOC_00021340
Chr2	stalkie_big_nohaplotig	exon	125436536	125436677	97	-	.	Parent=comp116853_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125436590	125436676	.	-	0	Parent=comp116853_c0_seq1.mrna1
Chr2	gffcl	locus	125437735	125441024	.	-	.	ID=RLOC_00021341;geneIDs=FBgn0030105.1.path1;transcripts=FBgn0030105.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125437735	125441024	.	-	.	ID=FBgn0030105.1.mrna1;geneID=FBgn0030105.1.path1;Name=FBgn0030105.1;Dir=sensecoverage=100.0;identity=100.0;matches=387;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021341
Chr2	stalkie_big_nohaplotig	exon	125437735	125437930	100	-	.	Parent=FBgn0030105.1.mrna1;Target=FBgn0030105.1 192 387 +
Chr2	stalkie_big_nohaplotig	exon	125437992	125438104	100	-	.	Parent=FBgn0030105.1.mrna1;Target=FBgn0030105.1 79 191 +
Chr2	stalkie_big_nohaplotig	exon	125440947	125441024	100	-	.	Parent=FBgn0030105.1.mrna1;Target=FBgn0030105.1 1 78 +
Chr2	stalkie_big_nohaplotig	CDS	125437735	125437930	.	-	1	Parent=FBgn0030105.1.mrna1;Target=FBgn0030105.1 192 387 +
Chr2	stalkie_big_nohaplotig	CDS	125437992	125438104	.	-	0	Parent=FBgn0030105.1.mrna1;Target=FBgn0030105.1 79 191 +
Chr2	stalkie_big_nohaplotig	CDS	125440947	125441024	.	-	0	Parent=FBgn0030105.1.mrna1;Target=FBgn0030105.1 1 78 +
Chr2	gffcl	locus	125439546	125440419	.	-	.	ID=RLOC_00021342;geneIDs=comp147863_c1_seq1.path1;transcripts=comp147863_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125439546	125440419	.	-	.	ID=comp147863_c1_seq1.mrna1;geneID=comp147863_c1_seq1.path1;Name=comp147863_c1_seq1;Dir=indeterminatecoverage=100.0;identity=93.1;matches=867;mismatches=7;indels=57;unknowns=0;Target=comp147863_c1_seq1 931 1 .;CDS_Target=comp147863_c1_seq1 635 75 .;locus=RLOC_00021342
Chr2	stalkie_big_nohaplotig	exon	125439546	125440419	93	-	.	Parent=comp147863_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125439787	125440345	.	-	0	Parent=comp147863_c1_seq1.mrna1
Chr2	gffcl	locus	125453504	125459319	.	-	.	ID=RLOC_00021343;geneIDs=FBgn0038244.1.path1,comp160188_c1_seq1.path1;transcripts=comp160188_c1_seq1.mrna1,FBgn0038244.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125453504	125459319	.	-	.	ID=comp160188_c1_seq1.mrna1;geneID=comp160188_c1_seq1.path1;Name=comp160188_c1_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=4684;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021343
Chr2	stalkie_big_nohaplotig	exon	125453504	125455167	99	-	.	Parent=comp160188_c1_seq1.mrna1;Target=comp160188_c1_seq1 3024 4687 +
Chr2	stalkie_big_nohaplotig	exon	125455233	125455947	100	-	.	Parent=comp160188_c1_seq1.mrna1;Target=comp160188_c1_seq1 2309 3023 +
Chr2	stalkie_big_nohaplotig	exon	125456663	125457054	100	-	.	Parent=comp160188_c1_seq1.mrna1;Target=comp160188_c1_seq1 1917 2308 +
Chr2	stalkie_big_nohaplotig	exon	125457263	125457675	100	-	.	Parent=comp160188_c1_seq1.mrna1;Target=comp160188_c1_seq1 1504 1916 +
Chr2	stalkie_big_nohaplotig	exon	125457750	125458045	100	-	.	Parent=comp160188_c1_seq1.mrna1;Target=comp160188_c1_seq1 1208 1503 +
Chr2	stalkie_big_nohaplotig	exon	125458113	125459319	99	-	.	Parent=comp160188_c1_seq1.mrna1;Target=comp160188_c1_seq1 1 1207 +
Chr2	stalkie_big_nohaplotig	CDS	125453569	125455167	.	-	0	Parent=comp160188_c1_seq1.mrna1;Target=comp160188_c1_seq1 3024 4622 +
Chr2	stalkie_big_nohaplotig	CDS	125455233	125455947	.	-	1	Parent=comp160188_c1_seq1.mrna1;Target=comp160188_c1_seq1 2309 3023 +
Chr2	stalkie_big_nohaplotig	CDS	125456663	125457054	.	-	0	Parent=comp160188_c1_seq1.mrna1;Target=comp160188_c1_seq1 1917 2308 +
Chr2	stalkie_big_nohaplotig	CDS	125457263	125457675	.	-	2	Parent=comp160188_c1_seq1.mrna1;Target=comp160188_c1_seq1 1504 1916 +
Chr2	stalkie_big_nohaplotig	CDS	125457750	125458045	.	-	1	Parent=comp160188_c1_seq1.mrna1;Target=comp160188_c1_seq1 1208 1503 +
Chr2	stalkie_big_nohaplotig	CDS	125458113	125458540	.	-	0	Parent=comp160188_c1_seq1.mrna1;Target=comp160188_c1_seq1 780 1207 +
Chr2	stalkie_big_nohaplotig	mRNA	125453572	125458814	.	-	.	ID=FBgn0038244.1.mrna1;geneID=FBgn0038244.1.path1;Name=FBgn0038244.1;Dir=sensecoverage=100.0;identity=100.0;matches=3888;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021343
Chr2	stalkie_big_nohaplotig	exon	125453572	125455167	100	-	.	Parent=FBgn0038244.1.mrna1;Target=FBgn0038244.1 2293 3888 +
Chr2	stalkie_big_nohaplotig	exon	125455233	125455947	100	-	.	Parent=FBgn0038244.1.mrna1;Target=FBgn0038244.1 1578 2292 +
Chr2	stalkie_big_nohaplotig	exon	125456663	125457054	100	-	.	Parent=FBgn0038244.1.mrna1;Target=FBgn0038244.1 1186 1577 +
Chr2	stalkie_big_nohaplotig	exon	125457263	125457675	100	-	.	Parent=FBgn0038244.1.mrna1;Target=FBgn0038244.1 773 1185 +
Chr2	stalkie_big_nohaplotig	exon	125457750	125458045	100	-	.	Parent=FBgn0038244.1.mrna1;Target=FBgn0038244.1 477 772 +
Chr2	stalkie_big_nohaplotig	exon	125458113	125458550	100	-	.	Parent=FBgn0038244.1.mrna1;Target=FBgn0038244.1 39 476 +
Chr2	stalkie_big_nohaplotig	exon	125458777	125458814	100	-	.	Parent=FBgn0038244.1.mrna1;Target=FBgn0038244.1 1 38 +
Chr2	stalkie_big_nohaplotig	CDS	125453572	125455167	.	-	0	Parent=FBgn0038244.1.mrna1;Target=FBgn0038244.1 2293 3888 +
Chr2	stalkie_big_nohaplotig	CDS	125455233	125455947	.	-	1	Parent=FBgn0038244.1.mrna1;Target=FBgn0038244.1 1578 2292 +
Chr2	stalkie_big_nohaplotig	CDS	125456663	125457054	.	-	0	Parent=FBgn0038244.1.mrna1;Target=FBgn0038244.1 1186 1577 +
Chr2	stalkie_big_nohaplotig	CDS	125457263	125457675	.	-	2	Parent=FBgn0038244.1.mrna1;Target=FBgn0038244.1 773 1185 +
Chr2	stalkie_big_nohaplotig	CDS	125457750	125458045	.	-	1	Parent=FBgn0038244.1.mrna1;Target=FBgn0038244.1 477 772 +
Chr2	stalkie_big_nohaplotig	CDS	125458113	125458550	.	-	1	Parent=FBgn0038244.1.mrna1;Target=FBgn0038244.1 39 476 +
Chr2	stalkie_big_nohaplotig	CDS	125458777	125458814	.	-	0	Parent=FBgn0038244.1.mrna1;Target=FBgn0038244.1 1 38 +
Chr2	gffcl	locus	125511817	125548958	.	-	.	ID=RLOC_00021345;geneIDs=FBgn0020299.1.path1;transcripts=FBgn0020299.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125511817	125548958	.	-	.	ID=FBgn0020299.1.mrna1;geneID=FBgn0020299.1.path1;Name=FBgn0020299.1;Dir=sensecoverage=95.5;identity=99.5;matches=2795;mismatches=14;indels=0;unknowns=0;locus=RLOC_00021345
Chr2	stalkie_big_nohaplotig	exon	125511817	125513314	99	-	.	Parent=FBgn0020299.1.mrna1;Target=FBgn0020299.1 1427 2924 +
Chr2	stalkie_big_nohaplotig	exon	125513717	125514067	100	-	.	Parent=FBgn0020299.1.mrna1;Target=FBgn0020299.1 1076 1426 +
Chr2	stalkie_big_nohaplotig	exon	125514152	125514369	100	-	.	Parent=FBgn0020299.1.mrna1;Target=FBgn0020299.1 858 1075 +
Chr2	stalkie_big_nohaplotig	exon	125514510	125514681	100	-	.	Parent=FBgn0020299.1.mrna1;Target=FBgn0020299.1 686 857 +
Chr2	stalkie_big_nohaplotig	exon	125547982	125548175	99	-	.	Parent=FBgn0020299.1.mrna1;Target=FBgn0020299.1 492 685 +
Chr2	stalkie_big_nohaplotig	exon	125548375	125548520	100	-	.	Parent=FBgn0020299.1.mrna1;Target=FBgn0020299.1 346 491 +
Chr2	stalkie_big_nohaplotig	exon	125548729	125548958	100	-	.	Parent=FBgn0020299.1.mrna1;Target=FBgn0020299.1 116 345 +
Chr2	stalkie_big_nohaplotig	CDS	125511819	125513314	.	-	2	Parent=FBgn0020299.1.mrna1;Target=FBgn0020299.1 1427 2922 +
Chr2	stalkie_big_nohaplotig	CDS	125513717	125514067	.	-	2	Parent=FBgn0020299.1.mrna1;Target=FBgn0020299.1 1076 1426 +
Chr2	stalkie_big_nohaplotig	CDS	125514152	125514369	.	-	1	Parent=FBgn0020299.1.mrna1;Target=FBgn0020299.1 858 1075 +
Chr2	stalkie_big_nohaplotig	CDS	125514510	125514681	.	-	2	Parent=FBgn0020299.1.mrna1;Target=FBgn0020299.1 686 857 +
Chr2	stalkie_big_nohaplotig	CDS	125547982	125548175	.	-	1	Parent=FBgn0020299.1.mrna1;Target=FBgn0020299.1 492 685 +
Chr2	stalkie_big_nohaplotig	CDS	125548375	125548520	.	-	0	Parent=FBgn0020299.1.mrna1;Target=FBgn0020299.1 346 491 +
Chr2	stalkie_big_nohaplotig	CDS	125548729	125548956	.	-	0	Parent=FBgn0020299.1.mrna1;Target=FBgn0020299.1 118 345 +
Chr2	gffcl	locus	125580044	125580188	.	-	.	ID=RLOC_00021346;geneIDs=FBgn0003169.1.path1;transcripts=FBgn0003169.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125580044	125580188	.	-	.	ID=FBgn0003169.1.mrna1;geneID=FBgn0003169.1.path1;Name=FBgn0003169.1;Dir=indeterminatecoverage=11.5;identity=100.0;matches=145;mismatches=0;indels=0;unknowns=0;Target=FBgn0003169.1 145 1 .;locus=RLOC_00021346
Chr2	stalkie_big_nohaplotig	exon	125580044	125580188	100	-	.	Parent=FBgn0003169.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125580044	125580188	.	-	0	Parent=FBgn0003169.1.mrna1
Chr2	gffcl	locus	125582700	125583069	.	+	.	ID=RLOC_00021347;geneIDs=FBgn0053905.1.path1;transcripts=FBgn0053905.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125582700	125583069	.	+	.	ID=FBgn0053905.1.mrna1;geneID=FBgn0053905.1.path1;Name=FBgn0053905.1;Dir=sensecoverage=100.0;identity=100.0;matches=315;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021347
Chr2	stalkie_big_nohaplotig	exon	125582700	125582885	100	+	.	Parent=FBgn0053905.1.mrna1;Target=FBgn0053905.1 1 186 +
Chr2	stalkie_big_nohaplotig	exon	125582941	125583069	100	+	.	Parent=FBgn0053905.1.mrna1;Target=FBgn0053905.1 187 315 +
Chr2	stalkie_big_nohaplotig	CDS	125582700	125582885	.	+	0	Parent=FBgn0053905.1.mrna1;Target=FBgn0053905.1 1 186 +
Chr2	stalkie_big_nohaplotig	CDS	125582941	125583069	.	+	0	Parent=FBgn0053905.1.mrna1;Target=FBgn0053905.1 187 315 +
Chr2	gffcl	locus	125585749	125599406	.	-	.	ID=RLOC_00021348;geneIDs=FBgn0038248.1.path1;transcripts=FBgn0038248.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125585749	125599406	.	-	.	ID=FBgn0038248.1.mrna1;geneID=FBgn0038248.1.path1;Name=FBgn0038248.1;Dir=sensecoverage=100.0;identity=100.0;matches=2087;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021348
Chr2	stalkie_big_nohaplotig	exon	125585749	125586147	100	-	.	Parent=FBgn0038248.1.mrna1;Target=FBgn0038248.1 1690 2088 +
Chr2	stalkie_big_nohaplotig	exon	125587226	125587532	100	-	.	Parent=FBgn0038248.1.mrna1;Target=FBgn0038248.1 1383 1689 +
Chr2	stalkie_big_nohaplotig	exon	125587603	125588032	99	-	.	Parent=FBgn0038248.1.mrna1;Target=FBgn0038248.1 953 1382 +
Chr2	stalkie_big_nohaplotig	exon	125588095	125588269	100	-	.	Parent=FBgn0038248.1.mrna1;Target=FBgn0038248.1 778 952 +
Chr2	stalkie_big_nohaplotig	exon	125588884	125589060	100	-	.	Parent=FBgn0038248.1.mrna1;Target=FBgn0038248.1 601 777 +
Chr2	stalkie_big_nohaplotig	exon	125589306	125589493	100	-	.	Parent=FBgn0038248.1.mrna1;Target=FBgn0038248.1 413 600 +
Chr2	stalkie_big_nohaplotig	exon	125589562	125589911	100	-	.	Parent=FBgn0038248.1.mrna1;Target=FBgn0038248.1 63 412 +
Chr2	stalkie_big_nohaplotig	exon	125599345	125599406	100	-	.	Parent=FBgn0038248.1.mrna1;Target=FBgn0038248.1 1 62 +
Chr2	stalkie_big_nohaplotig	CDS	125585749	125586147	.	-	0	Parent=FBgn0038248.1.mrna1;Target=FBgn0038248.1 1690 2088 +
Chr2	stalkie_big_nohaplotig	CDS	125587226	125587532	.	-	1	Parent=FBgn0038248.1.mrna1;Target=FBgn0038248.1 1383 1689 +
Chr2	stalkie_big_nohaplotig	CDS	125587603	125588032	.	-	2	Parent=FBgn0038248.1.mrna1;Target=FBgn0038248.1 953 1382 +
Chr2	stalkie_big_nohaplotig	CDS	125588095	125588269	.	-	0	Parent=FBgn0038248.1.mrna1;Target=FBgn0038248.1 778 952 +
Chr2	stalkie_big_nohaplotig	CDS	125588884	125589060	.	-	0	Parent=FBgn0038248.1.mrna1;Target=FBgn0038248.1 601 777 +
Chr2	stalkie_big_nohaplotig	CDS	125589306	125589493	.	-	2	Parent=FBgn0038248.1.mrna1;Target=FBgn0038248.1 413 600 +
Chr2	stalkie_big_nohaplotig	CDS	125589562	125589911	.	-	1	Parent=FBgn0038248.1.mrna1;Target=FBgn0038248.1 63 412 +
Chr2	stalkie_big_nohaplotig	CDS	125599345	125599406	.	-	0	Parent=FBgn0038248.1.mrna1;Target=FBgn0038248.1 1 62 +
Chr2	gffcl	locus	125620566	125621361	.	-	.	ID=RLOC_00021349;geneIDs=comp154659_c0_seq1.path1;transcripts=comp154659_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125620566	125621361	.	-	.	ID=comp154659_c0_seq1.mrna1;geneID=comp154659_c0_seq1.path1;Name=comp154659_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=795;mismatches=1;indels=0;unknowns=0;Target=comp154659_c0_seq1 796 1 .;CDS_Target=comp154659_c0_seq1 789 682 .;locus=RLOC_00021349
Chr2	stalkie_big_nohaplotig	exon	125620566	125621361	99	-	.	Parent=comp154659_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125620573	125620680	.	-	0	Parent=comp154659_c0_seq1.mrna1
Chr2	gffcl	locus	125621428	125621816	.	-	.	ID=RLOC_00021350;geneIDs=comp142376_c0_seq1.path1;transcripts=comp142376_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125621428	125621816	.	-	.	ID=comp142376_c0_seq1.mrna1;geneID=comp142376_c0_seq1.path1;Name=comp142376_c0_seq1;Dir=indeterminatecoverage=80.7;identity=99.0;matches=385;mismatches=4;indels=0;unknowns=0;Target=comp142376_c0_seq1 444 56 .;CDS_Target=comp142376_c0_seq1 138 58 .;locus=RLOC_00021350
Chr2	stalkie_big_nohaplotig	exon	125621428	125621816	98	-	.	Parent=comp142376_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125621734	125621814	.	-	0	Parent=comp142376_c0_seq1.mrna1
Chr2	gffcl	locus	125622969	125626777	.	-	.	ID=RLOC_00021351;geneIDs=FBgn0086686.1.path1;transcripts=FBgn0086686.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125622969	125626777	.	-	.	ID=FBgn0086686.1.mrna1;geneID=FBgn0086686.1.path1;Name=FBgn0086686.1;Dir=sensecoverage=100.0;identity=100.0;matches=3219;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021351
Chr2	stalkie_big_nohaplotig	exon	125622969	125623234	100	-	.	Parent=FBgn0086686.1.mrna1;Target=FBgn0086686.1 2954 3219 +
Chr2	stalkie_big_nohaplotig	exon	125623302	125623403	100	-	.	Parent=FBgn0086686.1.mrna1;Target=FBgn0086686.1 2852 2953 +
Chr2	stalkie_big_nohaplotig	exon	125623475	125624436	100	-	.	Parent=FBgn0086686.1.mrna1;Target=FBgn0086686.1 1890 2851 +
Chr2	stalkie_big_nohaplotig	exon	125624514	125626231	100	-	.	Parent=FBgn0086686.1.mrna1;Target=FBgn0086686.1 172 1889 +
Chr2	stalkie_big_nohaplotig	exon	125626607	125626777	100	-	.	Parent=FBgn0086686.1.mrna1;Target=FBgn0086686.1 1 171 +
Chr2	stalkie_big_nohaplotig	CDS	125622969	125623234	.	-	2	Parent=FBgn0086686.1.mrna1;Target=FBgn0086686.1 2954 3219 +
Chr2	stalkie_big_nohaplotig	CDS	125623302	125623403	.	-	2	Parent=FBgn0086686.1.mrna1;Target=FBgn0086686.1 2852 2953 +
Chr2	stalkie_big_nohaplotig	CDS	125623475	125624436	.	-	1	Parent=FBgn0086686.1.mrna1;Target=FBgn0086686.1 1890 2851 +
Chr2	stalkie_big_nohaplotig	CDS	125624514	125626231	.	-	0	Parent=FBgn0086686.1.mrna1;Target=FBgn0086686.1 172 1889 +
Chr2	stalkie_big_nohaplotig	CDS	125626607	125626777	.	-	0	Parent=FBgn0086686.1.mrna1;Target=FBgn0086686.1 1 171 +
Chr2	gffcl	locus	125635475	125635899	.	-	.	ID=RLOC_00021352;geneIDs=comp118735_c0_seq1.path1;transcripts=comp118735_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125635475	125635899	.	-	.	ID=comp118735_c0_seq1.mrna1;geneID=comp118735_c0_seq1.path1;Name=comp118735_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=423;mismatches=2;indels=1;unknowns=0;Target=comp118735_c0_seq1 426 1 .;CDS_Target=comp118735_c0_seq1 411 181 .;locus=RLOC_00021352
Chr2	stalkie_big_nohaplotig	exon	125635475	125635899	99	-	.	Parent=comp118735_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125635490	125635720	.	-	0	Parent=comp118735_c0_seq1.mrna1
Chr2	gffcl	locus	125648834	125654816	.	+	.	ID=RLOC_00021353;geneIDs=FBgn0039600.1.path1;transcripts=FBgn0039600.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125648834	125654816	.	+	.	ID=FBgn0039600.1.mrna1;geneID=FBgn0039600.1.path1;Name=FBgn0039600.1;Dir=sensecoverage=100.0;identity=100.0;matches=3179;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021353
Chr2	stalkie_big_nohaplotig	exon	125648834	125648918	100	+	.	Parent=FBgn0039600.1.mrna1;Target=FBgn0039600.1 1 85 +
Chr2	stalkie_big_nohaplotig	exon	125649144	125649226	100	+	.	Parent=FBgn0039600.1.mrna1;Target=FBgn0039600.1 86 168 +
Chr2	stalkie_big_nohaplotig	exon	125649622	125650585	99	+	.	Parent=FBgn0039600.1.mrna1;Target=FBgn0039600.1 169 1132 +
Chr2	stalkie_big_nohaplotig	exon	125650644	125650840	100	+	.	Parent=FBgn0039600.1.mrna1;Target=FBgn0039600.1 1133 1329 +
Chr2	stalkie_big_nohaplotig	exon	125650923	125651048	100	+	.	Parent=FBgn0039600.1.mrna1;Target=FBgn0039600.1 1330 1455 +
Chr2	stalkie_big_nohaplotig	exon	125652968	125653242	100	+	.	Parent=FBgn0039600.1.mrna1;Target=FBgn0039600.1 1456 1730 +
Chr2	stalkie_big_nohaplotig	exon	125653302	125654501	100	+	.	Parent=FBgn0039600.1.mrna1;Target=FBgn0039600.1 1731 2930 +
Chr2	stalkie_big_nohaplotig	exon	125654567	125654816	100	+	.	Parent=FBgn0039600.1.mrna1;Target=FBgn0039600.1 2931 3180 +
Chr2	stalkie_big_nohaplotig	CDS	125648834	125648918	.	+	0	Parent=FBgn0039600.1.mrna1;Target=FBgn0039600.1 1 85 +
Chr2	stalkie_big_nohaplotig	CDS	125649144	125649226	.	+	2	Parent=FBgn0039600.1.mrna1;Target=FBgn0039600.1 86 168 +
Chr2	stalkie_big_nohaplotig	CDS	125649622	125650585	.	+	0	Parent=FBgn0039600.1.mrna1;Target=FBgn0039600.1 169 1132 +
Chr2	stalkie_big_nohaplotig	CDS	125650644	125650840	.	+	2	Parent=FBgn0039600.1.mrna1;Target=FBgn0039600.1 1133 1329 +
Chr2	stalkie_big_nohaplotig	CDS	125650923	125651048	.	+	0	Parent=FBgn0039600.1.mrna1;Target=FBgn0039600.1 1330 1455 +
Chr2	stalkie_big_nohaplotig	CDS	125652968	125653242	.	+	0	Parent=FBgn0039600.1.mrna1;Target=FBgn0039600.1 1456 1730 +
Chr2	stalkie_big_nohaplotig	CDS	125653302	125654501	.	+	1	Parent=FBgn0039600.1.mrna1;Target=FBgn0039600.1 1731 2930 +
Chr2	stalkie_big_nohaplotig	CDS	125654567	125654816	.	+	1	Parent=FBgn0039600.1.mrna1;Target=FBgn0039600.1 2931 3180 +
Chr2	gffcl	locus	125651490	125651758	.	-	.	ID=RLOC_00021354;geneIDs=comp142358_c0_seq1.path1;transcripts=comp142358_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125651490	125651758	.	-	.	ID=comp142358_c0_seq1.mrna1;geneID=comp142358_c0_seq1.path1;Name=comp142358_c0_seq1;Dir=indeterminatecoverage=85.9;identity=100.0;matches=269;mismatches=0;indels=0;unknowns=0;Target=comp142358_c0_seq1 307 39 .;CDS_Target=comp142358_c0_seq1 146 57 .;locus=RLOC_00021354
Chr2	stalkie_big_nohaplotig	exon	125651490	125651758	100	-	.	Parent=comp142358_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125651651	125651740	.	-	0	Parent=comp142358_c0_seq1.mrna1
Chr2	gffcl	locus	125655589	125658777	.	-	.	ID=RLOC_00021355;geneIDs=FBgn0039601.1.path1;transcripts=FBgn0039601.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125655589	125658777	.	-	.	ID=FBgn0039601.1.mrna1;geneID=FBgn0039601.1.path1;Name=FBgn0039601.1;Dir=sensecoverage=100.0;identity=100.0;matches=1872;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021355
Chr2	stalkie_big_nohaplotig	exon	125655589	125656328	100	-	.	Parent=FBgn0039601.1.mrna1;Target=FBgn0039601.1 1133 1872 +
Chr2	stalkie_big_nohaplotig	exon	125656382	125656637	100	-	.	Parent=FBgn0039601.1.mrna1;Target=FBgn0039601.1 877 1132 +
Chr2	stalkie_big_nohaplotig	exon	125657722	125657877	100	-	.	Parent=FBgn0039601.1.mrna1;Target=FBgn0039601.1 721 876 +
Chr2	stalkie_big_nohaplotig	exon	125657941	125658310	100	-	.	Parent=FBgn0039601.1.mrna1;Target=FBgn0039601.1 351 720 +
Chr2	stalkie_big_nohaplotig	exon	125658373	125658486	100	-	.	Parent=FBgn0039601.1.mrna1;Target=FBgn0039601.1 237 350 +
Chr2	stalkie_big_nohaplotig	exon	125658542	125658777	100	-	.	Parent=FBgn0039601.1.mrna1;Target=FBgn0039601.1 1 236 +
Chr2	stalkie_big_nohaplotig	CDS	125655589	125656328	.	-	2	Parent=FBgn0039601.1.mrna1;Target=FBgn0039601.1 1133 1872 +
Chr2	stalkie_big_nohaplotig	CDS	125656382	125656637	.	-	0	Parent=FBgn0039601.1.mrna1;Target=FBgn0039601.1 877 1132 +
Chr2	stalkie_big_nohaplotig	CDS	125657722	125657877	.	-	0	Parent=FBgn0039601.1.mrna1;Target=FBgn0039601.1 721 876 +
Chr2	stalkie_big_nohaplotig	CDS	125657941	125658310	.	-	1	Parent=FBgn0039601.1.mrna1;Target=FBgn0039601.1 351 720 +
Chr2	stalkie_big_nohaplotig	CDS	125658373	125658486	.	-	1	Parent=FBgn0039601.1.mrna1;Target=FBgn0039601.1 237 350 +
Chr2	stalkie_big_nohaplotig	CDS	125658542	125658777	.	-	0	Parent=FBgn0039601.1.mrna1;Target=FBgn0039601.1 1 236 +
Chr2	gffcl	locus	125660671	125661431	.	+	.	ID=RLOC_00021356;geneIDs=FBgn0038166.1.path1;transcripts=FBgn0038166.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125660671	125661431	.	+	.	ID=FBgn0038166.1.mrna1;geneID=FBgn0038166.1.path1;Name=FBgn0038166.1;Dir=sensecoverage=100.0;identity=100.0;matches=657;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021356
Chr2	stalkie_big_nohaplotig	exon	125660671	125660784	100	+	.	Parent=FBgn0038166.1.mrna1;Target=FBgn0038166.1 1 114 +
Chr2	stalkie_big_nohaplotig	exon	125660836	125661159	100	+	.	Parent=FBgn0038166.1.mrna1;Target=FBgn0038166.1 115 438 +
Chr2	stalkie_big_nohaplotig	exon	125661213	125661431	100	+	.	Parent=FBgn0038166.1.mrna1;Target=FBgn0038166.1 439 657 +
Chr2	stalkie_big_nohaplotig	CDS	125660671	125660784	.	+	0	Parent=FBgn0038166.1.mrna1;Target=FBgn0038166.1 1 114 +
Chr2	stalkie_big_nohaplotig	CDS	125660836	125661159	.	+	0	Parent=FBgn0038166.1.mrna1;Target=FBgn0038166.1 115 438 +
Chr2	stalkie_big_nohaplotig	CDS	125661213	125661431	.	+	0	Parent=FBgn0038166.1.mrna1;Target=FBgn0038166.1 439 657 +
Chr2	gffcl	locus	125680476	125680994	.	-	.	ID=RLOC_00021358;geneIDs=comp152961_c0_seq1.path1;transcripts=comp152961_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125680476	125680994	.	-	.	ID=comp152961_c0_seq1.mrna1;geneID=comp152961_c0_seq1.path1;Name=comp152961_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.3;matches=479;mismatches=20;indels=20;unknowns=0;Target=comp152961_c0_seq1 499 1 .;CDS_Target=comp152961_c0_seq1 336 187 .;locus=RLOC_00021358
Chr2	stalkie_big_nohaplotig	exon	125680476	125680994	92	-	.	Parent=comp152961_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125680659	125680808	.	-	0	Parent=comp152961_c0_seq1.mrna1
Chr2	gffcl	locus	125681068	125682618	.	-	.	ID=RLOC_00021359;geneIDs=comp155442_c0_seq1.path1;transcripts=comp155442_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125681068	125682618	.	-	.	ID=comp155442_c0_seq1.mrna1;geneID=comp155442_c0_seq1.path1;Name=comp155442_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.9;matches=1527;mismatches=20;indels=29;unknowns=0;Target=comp155442_c0_seq1 1573 2 .;CDS_Target=comp155442_c0_seq1 1364 1254 .;locus=RLOC_00021359
Chr2	stalkie_big_nohaplotig	exon	125681068	125682618	96	-	.	Parent=comp155442_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125681276	125681366	.	-	0	Parent=comp155442_c0_seq1.mrna1
Chr2	gffcl	locus	125689368	125693321	.	+	.	ID=RLOC_00021360;geneIDs=comp156670_c0_seq1.path1;transcripts=comp156670_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125689368	125693321	.	+	.	ID=comp156670_c0_seq1.mrna1;geneID=comp156670_c0_seq1.path1;Name=comp156670_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=3232;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021360
Chr2	stalkie_big_nohaplotig	exon	125689368	125689840	100	+	.	Parent=comp156670_c0_seq1.mrna1;Target=comp156670_c0_seq1 1 473 +
Chr2	stalkie_big_nohaplotig	exon	125689898	125690062	100	+	.	Parent=comp156670_c0_seq1.mrna1;Target=comp156670_c0_seq1 474 638 +
Chr2	stalkie_big_nohaplotig	exon	125690140	125690265	100	+	.	Parent=comp156670_c0_seq1.mrna1;Target=comp156670_c0_seq1 639 764 +
Chr2	stalkie_big_nohaplotig	exon	125690325	125690645	100	+	.	Parent=comp156670_c0_seq1.mrna1;Target=comp156670_c0_seq1 765 1085 +
Chr2	stalkie_big_nohaplotig	exon	125690710	125691344	100	+	.	Parent=comp156670_c0_seq1.mrna1;Target=comp156670_c0_seq1 1086 1720 +
Chr2	stalkie_big_nohaplotig	exon	125691401	125692016	100	+	.	Parent=comp156670_c0_seq1.mrna1;Target=comp156670_c0_seq1 1721 2336 +
Chr2	stalkie_big_nohaplotig	exon	125692137	125692588	100	+	.	Parent=comp156670_c0_seq1.mrna1;Target=comp156670_c0_seq1 2337 2788 +
Chr2	stalkie_big_nohaplotig	exon	125692878	125693321	100	+	.	Parent=comp156670_c0_seq1.mrna1;Target=comp156670_c0_seq1 2789 3232 +
Chr2	stalkie_big_nohaplotig	CDS	125689603	125689840	.	+	0	Parent=comp156670_c0_seq1.mrna1;Target=comp156670_c0_seq1 236 473 +
Chr2	stalkie_big_nohaplotig	CDS	125689898	125690062	.	+	2	Parent=comp156670_c0_seq1.mrna1;Target=comp156670_c0_seq1 474 638 +
Chr2	stalkie_big_nohaplotig	CDS	125690140	125690265	.	+	2	Parent=comp156670_c0_seq1.mrna1;Target=comp156670_c0_seq1 639 764 +
Chr2	stalkie_big_nohaplotig	CDS	125690325	125690645	.	+	2	Parent=comp156670_c0_seq1.mrna1;Target=comp156670_c0_seq1 765 1085 +
Chr2	stalkie_big_nohaplotig	CDS	125690710	125691344	.	+	2	Parent=comp156670_c0_seq1.mrna1;Target=comp156670_c0_seq1 1086 1720 +
Chr2	stalkie_big_nohaplotig	CDS	125691401	125692016	.	+	0	Parent=comp156670_c0_seq1.mrna1;Target=comp156670_c0_seq1 1721 2336 +
Chr2	stalkie_big_nohaplotig	CDS	125692137	125692588	.	+	2	Parent=comp156670_c0_seq1.mrna1;Target=comp156670_c0_seq1 2337 2788 +
Chr2	stalkie_big_nohaplotig	CDS	125692878	125693132	.	+	0	Parent=comp156670_c0_seq1.mrna1;Target=comp156670_c0_seq1 2789 3043 +
Chr2	gffcl	locus	125694189	125697285	.	+	.	ID=RLOC_00021361;geneIDs=FBgn0038058.1.path1;transcripts=FBgn0038058.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125694189	125697285	.	+	.	ID=FBgn0038058.1.mrna1;geneID=FBgn0038058.1.path1;Name=FBgn0038058.1;Dir=sensecoverage=100.0;identity=100.0;matches=2064;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021361
Chr2	stalkie_big_nohaplotig	exon	125694189	125694301	100	+	.	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 1 113 +
Chr2	stalkie_big_nohaplotig	exon	125694363	125694513	100	+	.	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 114 264 +
Chr2	stalkie_big_nohaplotig	exon	125694709	125694939	100	+	.	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 265 495 +
Chr2	stalkie_big_nohaplotig	exon	125695002	125695222	100	+	.	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 496 716 +
Chr2	stalkie_big_nohaplotig	exon	125695281	125695401	100	+	.	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 717 837 +
Chr2	stalkie_big_nohaplotig	exon	125695452	125695575	100	+	.	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 838 961 +
Chr2	stalkie_big_nohaplotig	exon	125695639	125695841	100	+	.	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 962 1164 +
Chr2	stalkie_big_nohaplotig	exon	125695918	125696041	100	+	.	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 1165 1288 +
Chr2	stalkie_big_nohaplotig	exon	125696104	125696212	100	+	.	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 1289 1397 +
Chr2	stalkie_big_nohaplotig	exon	125696271	125696567	100	+	.	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 1398 1694 +
Chr2	stalkie_big_nohaplotig	exon	125696625	125696704	100	+	.	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 1695 1774 +
Chr2	stalkie_big_nohaplotig	exon	125696933	125697095	100	+	.	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 1775 1937 +
Chr2	stalkie_big_nohaplotig	exon	125697159	125697285	100	+	.	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 1938 2064 +
Chr2	stalkie_big_nohaplotig	CDS	125694189	125694301	.	+	0	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 1 113 +
Chr2	stalkie_big_nohaplotig	CDS	125694363	125694513	.	+	1	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 114 264 +
Chr2	stalkie_big_nohaplotig	CDS	125694709	125694939	.	+	0	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 265 495 +
Chr2	stalkie_big_nohaplotig	CDS	125695002	125695222	.	+	0	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 496 716 +
Chr2	stalkie_big_nohaplotig	CDS	125695281	125695401	.	+	1	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 717 837 +
Chr2	stalkie_big_nohaplotig	CDS	125695452	125695575	.	+	0	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 838 961 +
Chr2	stalkie_big_nohaplotig	CDS	125695639	125695841	.	+	2	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 962 1164 +
Chr2	stalkie_big_nohaplotig	CDS	125695918	125696041	.	+	0	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 1165 1288 +
Chr2	stalkie_big_nohaplotig	CDS	125696104	125696212	.	+	2	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 1289 1397 +
Chr2	stalkie_big_nohaplotig	CDS	125696271	125696567	.	+	1	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 1398 1694 +
Chr2	stalkie_big_nohaplotig	CDS	125696625	125696704	.	+	1	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 1695 1774 +
Chr2	stalkie_big_nohaplotig	CDS	125696933	125697095	.	+	2	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 1775 1937 +
Chr2	stalkie_big_nohaplotig	CDS	125697159	125697285	.	+	1	Parent=FBgn0038058.1.mrna1;Target=FBgn0038058.1 1938 2064 +
Chr2	gffcl	locus	125699398	125701370	.	+	.	ID=RLOC_00021362;geneIDs=FBgn0037391.1.path1;transcripts=FBgn0037391.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125699398	125701370	.	+	.	ID=FBgn0037391.1.mrna1;geneID=FBgn0037391.1.path1;Name=FBgn0037391.1;Dir=sensecoverage=100.0;identity=99.9;matches=1847;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021362
Chr2	stalkie_big_nohaplotig	exon	125699398	125700144	100	+	.	Parent=FBgn0037391.1.mrna1;Target=FBgn0037391.1 1 747 +
Chr2	stalkie_big_nohaplotig	exon	125700214	125701047	99	+	.	Parent=FBgn0037391.1.mrna1;Target=FBgn0037391.1 748 1581 +
Chr2	stalkie_big_nohaplotig	exon	125701104	125701370	100	+	.	Parent=FBgn0037391.1.mrna1;Target=FBgn0037391.1 1582 1848 +
Chr2	stalkie_big_nohaplotig	CDS	125699398	125700144	.	+	0	Parent=FBgn0037391.1.mrna1;Target=FBgn0037391.1 1 747 +
Chr2	stalkie_big_nohaplotig	CDS	125700214	125701047	.	+	0	Parent=FBgn0037391.1.mrna1;Target=FBgn0037391.1 748 1581 +
Chr2	stalkie_big_nohaplotig	CDS	125701104	125701370	.	+	0	Parent=FBgn0037391.1.mrna1;Target=FBgn0037391.1 1582 1848 +
Chr2	gffcl	locus	125702073	125703266	.	-	.	ID=RLOC_00021363;geneIDs=FBgn0028436.1.path1;transcripts=FBgn0028436.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125702073	125703266	.	-	.	ID=FBgn0028436.1.mrna1;geneID=FBgn0028436.1.path1;Name=FBgn0028436.1;Dir=sensecoverage=100.0;identity=99.9;matches=1049;mismatches=0;indels=1;unknowns=0;Target=FBgn0028436.1 3 68 +;locus=RLOC_00021363
Chr2	stalkie_big_nohaplotig	exon	125702073	125702380	100	-	.	Parent=FBgn0028436.1.mrna1;Target=FBgn0028436.1 743 1050 +
Chr2	stalkie_big_nohaplotig	exon	125702526	125703266	99	-	.	Parent=FBgn0028436.1.mrna1;Target=FBgn0028436.1 1 742 +
Chr2	stalkie_big_nohaplotig	CDS	125703200	125703264	.	-	0	Parent=FBgn0028436.1.mrna1
Chr2	gffcl	locus	125707010	125707693	.	-	.	ID=RLOC_00021365;geneIDs=FBgn0085316.1.path1;transcripts=FBgn0085316.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125707010	125707693	.	-	.	ID=FBgn0085316.1.mrna1;geneID=FBgn0085316.1.path1;Name=FBgn0085316.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=682;mismatches=2;indels=0;unknowns=0;Target=FBgn0085316.1 684 1 .;locus=RLOC_00021365
Chr2	stalkie_big_nohaplotig	exon	125707010	125707693	99	-	.	Parent=FBgn0085316.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125707010	125707693	.	-	0	Parent=FBgn0085316.1.mrna1
Chr2	gffcl	locus	125717188	125744325	.	-	.	ID=RLOC_00021366;geneIDs=FBgn0027575.1.path1;transcripts=FBgn0027575.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125717188	125744325	.	-	.	ID=FBgn0027575.1.mrna1;geneID=FBgn0027575.1.path1;Name=FBgn0027575.1;Dir=sensecoverage=99.6;identity=99.6;matches=2813;mismatches=11;indels=0;unknowns=0;locus=RLOC_00021366
Chr2	stalkie_big_nohaplotig	exon	125717188	125717330	99	-	.	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 2682 2824 +
Chr2	stalkie_big_nohaplotig	exon	125717415	125717520	100	-	.	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 2576 2681 +
Chr2	stalkie_big_nohaplotig	exon	125717586	125717925	98	-	.	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 2236 2575 +
Chr2	stalkie_big_nohaplotig	exon	125720311	125720535	99	-	.	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 2011 2235 +
Chr2	stalkie_big_nohaplotig	exon	125720593	125720703	100	-	.	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 1900 2010 +
Chr2	stalkie_big_nohaplotig	exon	125720760	125721123	99	-	.	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 1536 1899 +
Chr2	stalkie_big_nohaplotig	exon	125721181	125721335	99	-	.	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 1381 1535 +
Chr2	stalkie_big_nohaplotig	exon	125721401	125721541	100	-	.	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 1240 1380 +
Chr2	stalkie_big_nohaplotig	exon	125721608	125721826	99	-	.	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 1021 1239 +
Chr2	stalkie_big_nohaplotig	exon	125723407	125723587	100	-	.	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 840 1020 +
Chr2	stalkie_big_nohaplotig	exon	125733560	125733626	100	-	.	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 773 839 +
Chr2	stalkie_big_nohaplotig	exon	125733687	125734101	100	-	.	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 358 772 +
Chr2	stalkie_big_nohaplotig	exon	125734173	125734276	100	-	.	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 254 357 +
Chr2	stalkie_big_nohaplotig	exon	125734334	125734467	100	-	.	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 120 253 +
Chr2	stalkie_big_nohaplotig	exon	125744207	125744325	100	-	.	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 1 119 +
Chr2	stalkie_big_nohaplotig	CDS	125717189	125717330	.	-	1	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 2682 2823 +
Chr2	stalkie_big_nohaplotig	CDS	125717415	125717520	.	-	2	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 2576 2681 +
Chr2	stalkie_big_nohaplotig	CDS	125717586	125717925	.	-	0	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 2236 2575 +
Chr2	stalkie_big_nohaplotig	CDS	125720311	125720535	.	-	0	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 2011 2235 +
Chr2	stalkie_big_nohaplotig	CDS	125720593	125720703	.	-	0	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 1900 2010 +
Chr2	stalkie_big_nohaplotig	CDS	125720760	125721123	.	-	1	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 1536 1899 +
Chr2	stalkie_big_nohaplotig	CDS	125721181	125721335	.	-	0	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 1381 1535 +
Chr2	stalkie_big_nohaplotig	CDS	125721401	125721541	.	-	0	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 1240 1380 +
Chr2	stalkie_big_nohaplotig	CDS	125721608	125721826	.	-	0	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 1021 1239 +
Chr2	stalkie_big_nohaplotig	CDS	125723407	125723587	.	-	1	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 840 1020 +
Chr2	stalkie_big_nohaplotig	CDS	125733560	125733626	.	-	2	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 773 839 +
Chr2	stalkie_big_nohaplotig	CDS	125733687	125734101	.	-	0	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 358 772 +
Chr2	stalkie_big_nohaplotig	CDS	125734173	125734276	.	-	2	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 254 357 +
Chr2	stalkie_big_nohaplotig	CDS	125734334	125734467	.	-	1	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 120 253 +
Chr2	stalkie_big_nohaplotig	CDS	125744207	125744325	.	-	0	Parent=FBgn0027575.1.mrna1;Target=FBgn0027575.1 1 119 +
Chr2	gffcl	locus	125719273	125719463	.	-	.	ID=RLOC_00021367;geneIDs=comp92439_c0_seq1.path1;transcripts=comp92439_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125719273	125719463	.	-	.	ID=comp92439_c0_seq1.mrna1;geneID=comp92439_c0_seq1.path1;Name=comp92439_c0_seq1;Dir=indeterminatecoverage=86.8;identity=100.0;matches=191;mismatches=0;indels=0;unknowns=0;Target=comp92439_c0_seq1 209 19 .;CDS_Target=comp92439_c0_seq1 144 118 .;locus=RLOC_00021367
Chr2	stalkie_big_nohaplotig	exon	125719273	125719463	100	-	.	Parent=comp92439_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125719338	125719364	.	-	0	Parent=comp92439_c0_seq1.mrna1
Chr2	gffcl	locus	125739765	125740355	.	+	.	ID=RLOC_00021368;geneIDs=FBgn0038903.1.path1;transcripts=FBgn0038903.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125739765	125740355	.	+	.	ID=FBgn0038903.1.mrna1;geneID=FBgn0038903.1.path1;Name=FBgn0038903.1;Dir=sensecoverage=100.0;identity=100.0;matches=465;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021368
Chr2	stalkie_big_nohaplotig	exon	125739765	125739984	100	+	.	Parent=FBgn0038903.1.mrna1;Target=FBgn0038903.1 1 220 +
Chr2	stalkie_big_nohaplotig	exon	125740043	125740265	100	+	.	Parent=FBgn0038903.1.mrna1;Target=FBgn0038903.1 221 443 +
Chr2	stalkie_big_nohaplotig	exon	125740334	125740355	100	+	.	Parent=FBgn0038903.1.mrna1;Target=FBgn0038903.1 444 465 +
Chr2	stalkie_big_nohaplotig	CDS	125739765	125739984	.	+	0	Parent=FBgn0038903.1.mrna1;Target=FBgn0038903.1 1 220 +
Chr2	stalkie_big_nohaplotig	CDS	125740043	125740265	.	+	2	Parent=FBgn0038903.1.mrna1;Target=FBgn0038903.1 221 443 +
Chr2	stalkie_big_nohaplotig	CDS	125740334	125740355	.	+	1	Parent=FBgn0038903.1.mrna1;Target=FBgn0038903.1 444 465 +
Chr2	gffcl	locus	125740515	125748322	.	+	.	ID=RLOC_00021369;geneIDs=FBgn0031848.1.path1;transcripts=FBgn0031848.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125740515	125748322	.	+	.	ID=FBgn0031848.1.mrna1;geneID=FBgn0031848.1.path1;Name=FBgn0031848.1;Dir=sensecoverage=100.0;identity=100.0;matches=717;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021369
Chr2	stalkie_big_nohaplotig	exon	125740515	125740629	100	+	.	Parent=FBgn0031848.1.mrna1;Target=FBgn0031848.1 1 115 +
Chr2	stalkie_big_nohaplotig	exon	125747655	125748133	100	+	.	Parent=FBgn0031848.1.mrna1;Target=FBgn0031848.1 116 594 +
Chr2	stalkie_big_nohaplotig	exon	125748200	125748322	100	+	.	Parent=FBgn0031848.1.mrna1;Target=FBgn0031848.1 595 717 +
Chr2	stalkie_big_nohaplotig	CDS	125740515	125740629	.	+	0	Parent=FBgn0031848.1.mrna1;Target=FBgn0031848.1 1 115 +
Chr2	stalkie_big_nohaplotig	CDS	125747655	125748133	.	+	2	Parent=FBgn0031848.1.mrna1;Target=FBgn0031848.1 116 594 +
Chr2	stalkie_big_nohaplotig	CDS	125748200	125748322	.	+	0	Parent=FBgn0031848.1.mrna1;Target=FBgn0031848.1 595 717 +
Chr2	gffcl	locus	125748365	125749335	.	-	.	ID=RLOC_00021370;geneIDs=FBgn0026400.1.path1;transcripts=FBgn0026400.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125748365	125749335	.	-	.	ID=FBgn0026400.1.mrna1;geneID=FBgn0026400.1.path1;Name=FBgn0026400.1;Dir=sensecoverage=100.0;identity=99.9;matches=911;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021370
Chr2	stalkie_big_nohaplotig	exon	125748365	125748498	100	-	.	Parent=FBgn0026400.1.mrna1;Target=FBgn0026400.1 779 912 +
Chr2	stalkie_big_nohaplotig	exon	125748558	125749335	99	-	.	Parent=FBgn0026400.1.mrna1;Target=FBgn0026400.1 1 778 +
Chr2	stalkie_big_nohaplotig	CDS	125748365	125748498	.	-	2	Parent=FBgn0026400.1.mrna1;Target=FBgn0026400.1 779 912 +
Chr2	stalkie_big_nohaplotig	CDS	125748558	125749335	.	-	0	Parent=FBgn0026400.1.mrna1;Target=FBgn0026400.1 1 778 +
Chr2	gffcl	locus	125751002	125754338	.	+	.	ID=RLOC_00021371;geneIDs=FBgn0027868.1.path1;transcripts=FBgn0027868.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125751002	125754338	.	+	.	ID=FBgn0027868.1.mrna1;geneID=FBgn0027868.1.path1;Name=FBgn0027868.1;Dir=sensecoverage=100.0;identity=100.0;matches=2745;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021371
Chr2	stalkie_big_nohaplotig	exon	125751002	125751728	100	+	.	Parent=FBgn0027868.1.mrna1;Target=FBgn0027868.1 1 727 +
Chr2	stalkie_big_nohaplotig	exon	125752264	125753919	100	+	.	Parent=FBgn0027868.1.mrna1;Target=FBgn0027868.1 728 2383 +
Chr2	stalkie_big_nohaplotig	exon	125753977	125754338	100	+	.	Parent=FBgn0027868.1.mrna1;Target=FBgn0027868.1 2384 2745 +
Chr2	stalkie_big_nohaplotig	CDS	125751002	125751728	.	+	0	Parent=FBgn0027868.1.mrna1;Target=FBgn0027868.1 1 727 +
Chr2	stalkie_big_nohaplotig	CDS	125752264	125753919	.	+	2	Parent=FBgn0027868.1.mrna1;Target=FBgn0027868.1 728 2383 +
Chr2	stalkie_big_nohaplotig	CDS	125753977	125754338	.	+	2	Parent=FBgn0027868.1.mrna1;Target=FBgn0027868.1 2384 2745 +
Chr2	gffcl	locus	125758998	125760727	.	-	.	ID=RLOC_00021372;geneIDs=FBgn0004237.1.path1;transcripts=FBgn0004237.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125758998	125760727	.	-	.	ID=FBgn0004237.1.mrna1;geneID=FBgn0004237.1.path1;Name=FBgn0004237.1;Dir=sensecoverage=100.0;identity=100.0;matches=1146;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021372
Chr2	stalkie_big_nohaplotig	exon	125758998	125759098	100	-	.	Parent=FBgn0004237.1.mrna1;Target=FBgn0004237.1 1046 1146 +
Chr2	stalkie_big_nohaplotig	exon	125759166	125759598	100	-	.	Parent=FBgn0004237.1.mrna1;Target=FBgn0004237.1 613 1045 +
Chr2	stalkie_big_nohaplotig	exon	125759655	125760191	100	-	.	Parent=FBgn0004237.1.mrna1;Target=FBgn0004237.1 76 612 +
Chr2	stalkie_big_nohaplotig	exon	125760653	125760727	100	-	.	Parent=FBgn0004237.1.mrna1;Target=FBgn0004237.1 1 75 +
Chr2	stalkie_big_nohaplotig	CDS	125758998	125759098	.	-	2	Parent=FBgn0004237.1.mrna1;Target=FBgn0004237.1 1046 1146 +
Chr2	stalkie_big_nohaplotig	CDS	125759166	125759598	.	-	0	Parent=FBgn0004237.1.mrna1;Target=FBgn0004237.1 613 1045 +
Chr2	stalkie_big_nohaplotig	CDS	125759655	125760191	.	-	0	Parent=FBgn0004237.1.mrna1;Target=FBgn0004237.1 76 612 +
Chr2	stalkie_big_nohaplotig	CDS	125760653	125760727	.	-	0	Parent=FBgn0004237.1.mrna1;Target=FBgn0004237.1 1 75 +
Chr2	gffcl	locus	125763560	125772850	.	+	.	ID=RLOC_00021373;geneIDs=FBgn0004587.1.path1,comp152811_c0_seq1.path1;transcripts=FBgn0004587.1.mrna1,comp152811_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125763560	125772545	.	+	.	ID=FBgn0004587.1.mrna1;geneID=FBgn0004587.1.path1;Name=FBgn0004587.1;Dir=sensecoverage=100.0;identity=100.0;matches=1053;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021373
Chr2	stalkie_big_nohaplotig	exon	125763560	125763694	100	+	.	Parent=FBgn0004587.1.mrna1;Target=FBgn0004587.1 1 135 +
Chr2	stalkie_big_nohaplotig	exon	125764007	125764077	100	+	.	Parent=FBgn0004587.1.mrna1;Target=FBgn0004587.1 136 206 +
Chr2	stalkie_big_nohaplotig	exon	125764148	125764252	100	+	.	Parent=FBgn0004587.1.mrna1;Target=FBgn0004587.1 207 311 +
Chr2	stalkie_big_nohaplotig	exon	125767677	125767773	100	+	.	Parent=FBgn0004587.1.mrna1;Target=FBgn0004587.1 312 408 +
Chr2	stalkie_big_nohaplotig	exon	125770678	125770751	100	+	.	Parent=FBgn0004587.1.mrna1;Target=FBgn0004587.1 409 482 +
Chr2	stalkie_big_nohaplotig	exon	125770816	125771127	100	+	.	Parent=FBgn0004587.1.mrna1;Target=FBgn0004587.1 483 794 +
Chr2	stalkie_big_nohaplotig	exon	125772032	125772187	100	+	.	Parent=FBgn0004587.1.mrna1;Target=FBgn0004587.1 795 950 +
Chr2	stalkie_big_nohaplotig	exon	125772443	125772545	100	+	.	Parent=FBgn0004587.1.mrna1;Target=FBgn0004587.1 951 1053 +
Chr2	stalkie_big_nohaplotig	CDS	125763560	125763694	.	+	0	Parent=FBgn0004587.1.mrna1;Target=FBgn0004587.1 1 135 +
Chr2	stalkie_big_nohaplotig	CDS	125764007	125764077	.	+	0	Parent=FBgn0004587.1.mrna1;Target=FBgn0004587.1 136 206 +
Chr2	stalkie_big_nohaplotig	CDS	125764148	125764252	.	+	1	Parent=FBgn0004587.1.mrna1;Target=FBgn0004587.1 207 311 +
Chr2	stalkie_big_nohaplotig	CDS	125767677	125767773	.	+	1	Parent=FBgn0004587.1.mrna1;Target=FBgn0004587.1 312 408 +
Chr2	stalkie_big_nohaplotig	CDS	125770678	125770751	.	+	0	Parent=FBgn0004587.1.mrna1;Target=FBgn0004587.1 409 482 +
Chr2	stalkie_big_nohaplotig	CDS	125770816	125771127	.	+	1	Parent=FBgn0004587.1.mrna1;Target=FBgn0004587.1 483 794 +
Chr2	stalkie_big_nohaplotig	CDS	125772032	125772187	.	+	1	Parent=FBgn0004587.1.mrna1;Target=FBgn0004587.1 795 950 +
Chr2	stalkie_big_nohaplotig	CDS	125772443	125772545	.	+	1	Parent=FBgn0004587.1.mrna1;Target=FBgn0004587.1 951 1053 +
Chr2	stalkie_big_nohaplotig	mRNA	125769072	125772850	.	+	.	ID=comp152811_c0_seq1.mrna1;geneID=comp152811_c0_seq1.path1;Name=comp152811_c0_seq1;Dir=sensecoverage=65.4;identity=100.0;matches=1985;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021373
Chr2	stalkie_big_nohaplotig	exon	125769072	125769223	100	+	.	Parent=comp152811_c0_seq1.mrna1;Target=comp152811_c0_seq1 1 152 +
Chr2	stalkie_big_nohaplotig	exon	125769296	125770178	100	+	.	Parent=comp152811_c0_seq1.mrna1;Target=comp152811_c0_seq1 153 1035 +
Chr2	stalkie_big_nohaplotig	exon	125770678	125770751	100	+	.	Parent=comp152811_c0_seq1.mrna1;Target=comp152811_c0_seq1 1036 1109 +
Chr2	stalkie_big_nohaplotig	exon	125770816	125771127	100	+	.	Parent=comp152811_c0_seq1.mrna1;Target=comp152811_c0_seq1 1110 1421 +
Chr2	stalkie_big_nohaplotig	exon	125772032	125772187	100	+	.	Parent=comp152811_c0_seq1.mrna1;Target=comp152811_c0_seq1 1422 1577 +
Chr2	stalkie_big_nohaplotig	exon	125772443	125772850	100	+	.	Parent=comp152811_c0_seq1.mrna1;Target=comp152811_c0_seq1 1578 1985 +
Chr2	stalkie_big_nohaplotig	CDS	125770693	125770751	.	+	0	Parent=comp152811_c0_seq1.mrna1;Target=comp152811_c0_seq1 1051 1109 +
Chr2	stalkie_big_nohaplotig	CDS	125770816	125771127	.	+	1	Parent=comp152811_c0_seq1.mrna1;Target=comp152811_c0_seq1 1110 1421 +
Chr2	stalkie_big_nohaplotig	CDS	125772032	125772187	.	+	1	Parent=comp152811_c0_seq1.mrna1;Target=comp152811_c0_seq1 1422 1577 +
Chr2	stalkie_big_nohaplotig	CDS	125772443	125772548	.	+	1	Parent=comp152811_c0_seq1.mrna1;Target=comp152811_c0_seq1 1578 1683 +
Chr2	gffcl	locus	125771244	125771746	.	+	.	ID=RLOC_00021374;geneIDs=comp119117_c0_seq1.path1;transcripts=comp119117_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125771244	125771746	.	+	.	ID=comp119117_c0_seq1.mrna1;geneID=comp119117_c0_seq1.path1;Name=comp119117_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.4;matches=495;mismatches=8;indels=0;unknowns=0;Target=comp119117_c0_seq1 503 1 .;CDS_Target=comp119117_c0_seq1 266 147 .;locus=RLOC_00021374
Chr2	stalkie_big_nohaplotig	exon	125771244	125771746	98	+	.	Parent=comp119117_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125771390	125771509	.	+	0	Parent=comp119117_c0_seq1.mrna1
Chr2	gffcl	locus	125776137	125776796	.	-	.	ID=RLOC_00021375;geneIDs=comp134698_c0_seq1.path1;transcripts=comp134698_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125776137	125776796	.	-	.	ID=comp134698_c0_seq1.mrna1;geneID=comp134698_c0_seq1.path1;Name=comp134698_c0_seq1;Dir=sensecoverage=97.4;identity=99.8;matches=603;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021375
Chr2	stalkie_big_nohaplotig	exon	125776137	125776598	99	-	.	Parent=comp134698_c0_seq1.mrna1;Target=comp134698_c0_seq1 143 604 +
Chr2	stalkie_big_nohaplotig	exon	125776655	125776796	100	-	.	Parent=comp134698_c0_seq1.mrna1;Target=comp134698_c0_seq1 1 142 +
Chr2	stalkie_big_nohaplotig	CDS	125776333	125776598	.	-	2	Parent=comp134698_c0_seq1.mrna1;Target=comp134698_c0_seq1 143 408 +
Chr2	stalkie_big_nohaplotig	CDS	125776655	125776757	.	-	0	Parent=comp134698_c0_seq1.mrna1;Target=comp134698_c0_seq1 40 142 +
Chr2	gffcl	locus	125779245	125780697	.	+	.	ID=RLOC_00021376;geneIDs=FBgn0260940.1.path1;transcripts=FBgn0260940.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125779245	125780697	.	+	.	ID=FBgn0260940.1.mrna1;geneID=FBgn0260940.1.path1;Name=FBgn0260940.1;Dir=sensecoverage=100.0;identity=100.0;matches=762;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021376
Chr2	stalkie_big_nohaplotig	exon	125779245	125779596	100	+	.	Parent=FBgn0260940.1.mrna1;Target=FBgn0260940.1 1 352 +
Chr2	stalkie_big_nohaplotig	exon	125779658	125779787	100	+	.	Parent=FBgn0260940.1.mrna1;Target=FBgn0260940.1 353 482 +
Chr2	stalkie_big_nohaplotig	exon	125780350	125780496	100	+	.	Parent=FBgn0260940.1.mrna1;Target=FBgn0260940.1 483 629 +
Chr2	stalkie_big_nohaplotig	exon	125780565	125780697	100	+	.	Parent=FBgn0260940.1.mrna1;Target=FBgn0260940.1 630 762 +
Chr2	stalkie_big_nohaplotig	CDS	125779245	125779596	.	+	0	Parent=FBgn0260940.1.mrna1;Target=FBgn0260940.1 1 352 +
Chr2	stalkie_big_nohaplotig	CDS	125779658	125779787	.	+	2	Parent=FBgn0260940.1.mrna1;Target=FBgn0260940.1 353 482 +
Chr2	stalkie_big_nohaplotig	CDS	125780350	125780496	.	+	1	Parent=FBgn0260940.1.mrna1;Target=FBgn0260940.1 483 629 +
Chr2	stalkie_big_nohaplotig	CDS	125780565	125780697	.	+	1	Parent=FBgn0260940.1.mrna1;Target=FBgn0260940.1 630 762 +
Chr2	gffcl	locus	125787810	125788303	.	-	.	ID=RLOC_00021377;geneIDs=comp138857_c0_seq1.path1;transcripts=comp138857_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125787810	125788303	.	-	.	ID=comp138857_c0_seq1.mrna1;geneID=comp138857_c0_seq1.path1;Name=comp138857_c0_seq1;Dir=antisensecoverage=97.6;identity=100.0;matches=443;mismatches=0;indels=0;unknowns=0;Target=comp138857_c0_seq1 14 145 .;locus=RLOC_00021377
Chr2	stalkie_big_nohaplotig	exon	125787810	125787987	100	-	.	Parent=comp138857_c0_seq1.mrna1;Target=comp138857_c0_seq1 1 178 -
Chr2	stalkie_big_nohaplotig	exon	125788039	125788303	100	-	.	Parent=comp138857_c0_seq1.mrna1;Target=comp138857_c0_seq1 179 443 -
Chr2	stalkie_big_nohaplotig	CDS	125787823	125787954	.	-	0	Parent=comp138857_c0_seq1.mrna1
Chr2	gffcl	locus	125803792	125804871	.	+	.	ID=RLOC_00021378;geneIDs=comp142705_c0_seq1.path1;transcripts=comp142705_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125803792	125804871	.	+	.	ID=comp142705_c0_seq1.mrna1;geneID=comp142705_c0_seq1.path1;Name=comp142705_c0_seq1;Dir=indeterminatecoverage=97.6;identity=100.0;matches=1080;mismatches=0;indels=0;unknowns=0;Target=comp142705_c0_seq1 1087 8 .;CDS_Target=comp142705_c0_seq1 891 304 .;locus=RLOC_00021378
Chr2	stalkie_big_nohaplotig	exon	125803792	125804871	100	+	.	Parent=comp142705_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125804088	125804675	.	+	0	Parent=comp142705_c0_seq1.mrna1
Chr2	gffcl	locus	125808431	125812139	.	+	.	ID=RLOC_00021379;geneIDs=FBgn0038912.1.path1;transcripts=FBgn0038912.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125808431	125812139	.	+	.	ID=FBgn0038912.1.mrna1;geneID=FBgn0038912.1.path1;Name=FBgn0038912.1;Dir=sensecoverage=100.0;identity=100.0;matches=1203;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021379
Chr2	stalkie_big_nohaplotig	exon	125808431	125808592	100	+	.	Parent=FBgn0038912.1.mrna1;Target=FBgn0038912.1 1 162 +
Chr2	stalkie_big_nohaplotig	exon	125810826	125810921	100	+	.	Parent=FBgn0038912.1.mrna1;Target=FBgn0038912.1 163 258 +
Chr2	stalkie_big_nohaplotig	exon	125810994	125811236	100	+	.	Parent=FBgn0038912.1.mrna1;Target=FBgn0038912.1 259 501 +
Chr2	stalkie_big_nohaplotig	exon	125811304	125811441	100	+	.	Parent=FBgn0038912.1.mrna1;Target=FBgn0038912.1 502 639 +
Chr2	stalkie_big_nohaplotig	exon	125811513	125811914	100	+	.	Parent=FBgn0038912.1.mrna1;Target=FBgn0038912.1 640 1041 +
Chr2	stalkie_big_nohaplotig	exon	125811978	125812139	100	+	.	Parent=FBgn0038912.1.mrna1;Target=FBgn0038912.1 1042 1203 +
Chr2	stalkie_big_nohaplotig	CDS	125808431	125808592	.	+	0	Parent=FBgn0038912.1.mrna1;Target=FBgn0038912.1 1 162 +
Chr2	stalkie_big_nohaplotig	CDS	125810826	125810921	.	+	0	Parent=FBgn0038912.1.mrna1;Target=FBgn0038912.1 163 258 +
Chr2	stalkie_big_nohaplotig	CDS	125810994	125811236	.	+	0	Parent=FBgn0038912.1.mrna1;Target=FBgn0038912.1 259 501 +
Chr2	stalkie_big_nohaplotig	CDS	125811304	125811441	.	+	0	Parent=FBgn0038912.1.mrna1;Target=FBgn0038912.1 502 639 +
Chr2	stalkie_big_nohaplotig	CDS	125811513	125811914	.	+	0	Parent=FBgn0038912.1.mrna1;Target=FBgn0038912.1 640 1041 +
Chr2	stalkie_big_nohaplotig	CDS	125811978	125812139	.	+	0	Parent=FBgn0038912.1.mrna1;Target=FBgn0038912.1 1042 1203 +
Chr2	gffcl	locus	125812319	125813714	.	-	.	ID=RLOC_00021380;geneIDs=FBgn0083984.1.path1;transcripts=FBgn0083984.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125812319	125813714	.	-	.	ID=FBgn0083984.1.mrna1;geneID=FBgn0083984.1.path1;Name=FBgn0083984.1;Dir=sensecoverage=100.0;identity=100.0;matches=426;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021380
Chr2	stalkie_big_nohaplotig	exon	125812319	125812446	100	-	.	Parent=FBgn0083984.1.mrna1;Target=FBgn0083984.1 299 426 +
Chr2	stalkie_big_nohaplotig	exon	125813353	125813539	100	-	.	Parent=FBgn0083984.1.mrna1;Target=FBgn0083984.1 112 298 +
Chr2	stalkie_big_nohaplotig	exon	125813604	125813714	100	-	.	Parent=FBgn0083984.1.mrna1;Target=FBgn0083984.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	125812319	125812446	.	-	2	Parent=FBgn0083984.1.mrna1;Target=FBgn0083984.1 299 426 +
Chr2	stalkie_big_nohaplotig	CDS	125813353	125813539	.	-	0	Parent=FBgn0083984.1.mrna1;Target=FBgn0083984.1 112 298 +
Chr2	stalkie_big_nohaplotig	CDS	125813604	125813714	.	-	0	Parent=FBgn0083984.1.mrna1;Target=FBgn0083984.1 1 111 +
Chr2	gffcl	locus	125814228	125933885	.	-	.	ID=RLOC_00021381;geneIDs=FBgn0038652.1.path1,FBgn0260935.1.path1;transcripts=FBgn0260935.1.mrna1,FBgn0038652.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125814228	125933885	.	-	.	ID=FBgn0260935.1.mrna1;geneID=FBgn0260935.1.path1;Name=FBgn0260935.1;Dir=sensecoverage=89.3;identity=92.6;matches=1941;mismatches=74;indels=82;unknowns=0;locus=RLOC_00021381
Chr2	stalkie_big_nohaplotig	exon	125814228	125814459	100	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 3798 4029 +
Chr2	stalkie_big_nohaplotig	exon	125814526	125814701	100	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 3622 3797 +
Chr2	stalkie_big_nohaplotig	exon	125814774	125815212	100	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 3183 3621 +
Chr2	stalkie_big_nohaplotig	exon	125815267	125815717	100	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 2732 3182 +
Chr2	stalkie_big_nohaplotig	exon	125815782	125815934	100	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 2579 2731 +
Chr2	stalkie_big_nohaplotig	exon	125816001	125816214	100	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 2365 2578 +
Chr2	stalkie_big_nohaplotig	exon	125832284	125832285	100	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 2363 2364 +
Chr2	stalkie_big_nohaplotig	exon	125843844	125843850	100	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 2356 2362 +
Chr2	stalkie_big_nohaplotig	exon	125847112	125847120	100	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 2334 2342 +
Chr2	stalkie_big_nohaplotig	exon	125878700	125878799	49	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 2255 2333 +
Chr2	stalkie_big_nohaplotig	exon	125885308	125885324	42	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 2222 2254 +
Chr2	stalkie_big_nohaplotig	exon	125887606	125887616	100	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 1175 1185 +
Chr2	stalkie_big_nohaplotig	exon	125887671	125887679	100	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 1120 1128 +
Chr2	stalkie_big_nohaplotig	exon	125889262	125889269	100	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 1063 1070 +
Chr2	stalkie_big_nohaplotig	exon	125889286	125889293	100	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 999 1006 +
Chr2	stalkie_big_nohaplotig	exon	125891205	125891292	54	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 916 997 +
Chr2	stalkie_big_nohaplotig	exon	125906067	125906076	100	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 906 915 +
Chr2	stalkie_big_nohaplotig	exon	125908406	125908438	57	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 882 905 +
Chr2	stalkie_big_nohaplotig	exon	125909704	125909750	56	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 833 881 +
Chr2	stalkie_big_nohaplotig	exon	125909820	125909827	100	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 683 690 +
Chr2	stalkie_big_nohaplotig	exon	125909920	125909931	100	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 474 485 +
Chr2	stalkie_big_nohaplotig	exon	125910801	125910807	100	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 467 473 +
Chr2	stalkie_big_nohaplotig	exon	125933863	125933885	78	-	.	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 433 451 +
Chr2	stalkie_big_nohaplotig	CDS	125814228	125814459	.	-	1	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 3798 4029 +
Chr2	stalkie_big_nohaplotig	CDS	125814526	125814701	.	-	0	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 3622 3797 +
Chr2	stalkie_big_nohaplotig	CDS	125814774	125815212	.	-	1	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 3183 3621 +
Chr2	stalkie_big_nohaplotig	CDS	125815267	125815717	.	-	2	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 2732 3182 +
Chr2	stalkie_big_nohaplotig	CDS	125815782	125815934	.	-	2	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 2579 2731 +
Chr2	stalkie_big_nohaplotig	CDS	125816001	125816169	.	-	0	Parent=FBgn0260935.1.mrna1;Target=FBgn0260935.1 2410 2578 +
Chr2	stalkie_big_nohaplotig	mRNA	125884912	125886913	.	-	.	ID=FBgn0038652.1.mrna1;geneID=FBgn0038652.1.path1;Name=FBgn0038652.1;Dir=sensecoverage=100.0;identity=99.9;matches=1378;mismatches=1;indels=0;unknowns=31;locus=RLOC_00021381
Chr2	stalkie_big_nohaplotig	exon	125884912	125885389	100	-	.	Parent=FBgn0038652.1.mrna1;Target=FBgn0038652.1 933 1410 +
Chr2	stalkie_big_nohaplotig	exon	125885466	125885614	99	-	.	Parent=FBgn0038652.1.mrna1;Target=FBgn0038652.1 784 932 +
Chr2	stalkie_big_nohaplotig	exon	125885699	125885809	100	-	.	Parent=FBgn0038652.1.mrna1;Target=FBgn0038652.1 673 783 +
Chr2	stalkie_big_nohaplotig	exon	125885973	125886246	100	-	.	Parent=FBgn0038652.1.mrna1;Target=FBgn0038652.1 399 672 +
Chr2	stalkie_big_nohaplotig	exon	125886411	125886629	100	-	.	Parent=FBgn0038652.1.mrna1;Target=FBgn0038652.1 180 398 +
Chr2	stalkie_big_nohaplotig	exon	125886735	125886913	100	-	.	Parent=FBgn0038652.1.mrna1;Target=FBgn0038652.1 1 179 +
Chr2	stalkie_big_nohaplotig	CDS	125884912	125885389	.	-	1	Parent=FBgn0038652.1.mrna1;Target=FBgn0038652.1 933 1410 +
Chr2	stalkie_big_nohaplotig	CDS	125885466	125885614	.	-	0	Parent=FBgn0038652.1.mrna1;Target=FBgn0038652.1 784 932 +
Chr2	stalkie_big_nohaplotig	CDS	125885699	125885809	.	-	0	Parent=FBgn0038652.1.mrna1;Target=FBgn0038652.1 673 783 +
Chr2	stalkie_big_nohaplotig	CDS	125885973	125886246	.	-	1	Parent=FBgn0038652.1.mrna1;Target=FBgn0038652.1 399 672 +
Chr2	stalkie_big_nohaplotig	CDS	125886411	125886629	.	-	1	Parent=FBgn0038652.1.mrna1;Target=FBgn0038652.1 180 398 +
Chr2	stalkie_big_nohaplotig	CDS	125886735	125886913	.	-	0	Parent=FBgn0038652.1.mrna1;Target=FBgn0038652.1 1 179 +
Chr2	gffcl	locus	125833007	125837099	.	-	.	ID=RLOC_00021382;geneIDs=FBgn0051465.1.path1;transcripts=FBgn0051465.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125833007	125837099	.	-	.	ID=FBgn0051465.1.mrna1;geneID=FBgn0051465.1.path1;Name=FBgn0051465.1;Dir=sensecoverage=100.0;identity=98.9;matches=2440;mismatches=26;indels=0;unknowns=0;locus=RLOC_00021382
Chr2	stalkie_big_nohaplotig	exon	125833007	125833224	99	-	.	Parent=FBgn0051465.1.mrna1;Target=FBgn0051465.1 2249 2466 +
Chr2	stalkie_big_nohaplotig	exon	125833293	125833568	98	-	.	Parent=FBgn0051465.1.mrna1;Target=FBgn0051465.1 1973 2248 +
Chr2	stalkie_big_nohaplotig	exon	125835061	125835261	99	-	.	Parent=FBgn0051465.1.mrna1;Target=FBgn0051465.1 1772 1972 +
Chr2	stalkie_big_nohaplotig	exon	125835329	125837099	98	-	.	Parent=FBgn0051465.1.mrna1;Target=FBgn0051465.1 1 1771 +
Chr2	stalkie_big_nohaplotig	CDS	125833007	125833224	.	-	2	Parent=FBgn0051465.1.mrna1;Target=FBgn0051465.1 2249 2466 +
Chr2	stalkie_big_nohaplotig	CDS	125833293	125833568	.	-	2	Parent=FBgn0051465.1.mrna1;Target=FBgn0051465.1 1973 2248 +
Chr2	stalkie_big_nohaplotig	CDS	125835061	125835261	.	-	2	Parent=FBgn0051465.1.mrna1;Target=FBgn0051465.1 1772 1972 +
Chr2	stalkie_big_nohaplotig	CDS	125835329	125837054	.	-	0	Parent=FBgn0051465.1.mrna1;Target=FBgn0051465.1 46 1771 +
Chr2	gffcl	locus	125837150	125839408	.	-	.	ID=RLOC_00021383;geneIDs=FBgn0027584.1.path1;transcripts=FBgn0027584.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125837150	125839408	.	-	.	ID=FBgn0027584.1.mrna1;geneID=FBgn0027584.1.path1;Name=FBgn0027584.1;Dir=sensecoverage=99.8;identity=98.8;matches=1574;mismatches=19;indels=0;unknowns=0;locus=RLOC_00021383
Chr2	stalkie_big_nohaplotig	exon	125837150	125837315	98	-	.	Parent=FBgn0027584.1.mrna1;Target=FBgn0027584.1 1431 1596 +
Chr2	stalkie_big_nohaplotig	exon	125837738	125837870	99	-	.	Parent=FBgn0027584.1.mrna1;Target=FBgn0027584.1 1298 1430 +
Chr2	stalkie_big_nohaplotig	exon	125837926	125838246	97	-	.	Parent=FBgn0027584.1.mrna1;Target=FBgn0027584.1 977 1297 +
Chr2	stalkie_big_nohaplotig	exon	125838315	125838525	100	-	.	Parent=FBgn0027584.1.mrna1;Target=FBgn0027584.1 766 976 +
Chr2	stalkie_big_nohaplotig	exon	125838647	125839408	98	-	.	Parent=FBgn0027584.1.mrna1;Target=FBgn0027584.1 4 765 +
Chr2	stalkie_big_nohaplotig	CDS	125837150	125837315	.	-	1	Parent=FBgn0027584.1.mrna1;Target=FBgn0027584.1 1431 1596 +
Chr2	stalkie_big_nohaplotig	CDS	125837738	125837870	.	-	2	Parent=FBgn0027584.1.mrna1;Target=FBgn0027584.1 1298 1430 +
Chr2	stalkie_big_nohaplotig	CDS	125837926	125838246	.	-	2	Parent=FBgn0027584.1.mrna1;Target=FBgn0027584.1 977 1297 +
Chr2	stalkie_big_nohaplotig	CDS	125838315	125838525	.	-	0	Parent=FBgn0027584.1.mrna1;Target=FBgn0027584.1 766 976 +
Chr2	stalkie_big_nohaplotig	CDS	125838647	125839408	.	-	0	Parent=FBgn0027584.1.mrna1;Target=FBgn0027584.1 4 765 +
Chr2	gffcl	locus	125841654	125843294	.	+	.	ID=RLOC_00021384;geneIDs=FBgn0015625.1.path1;transcripts=FBgn0015625.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125841654	125843294	.	+	.	ID=FBgn0015625.1.mrna1;geneID=FBgn0015625.1.path1;Name=FBgn0015625.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1638;mismatches=3;indels=0;unknowns=0;Target=FBgn0015625.1 1641 1 .;locus=RLOC_00021384
Chr2	stalkie_big_nohaplotig	exon	125841654	125843294	99	+	.	Parent=FBgn0015625.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125841654	125843294	.	+	0	Parent=FBgn0015625.1.mrna1
Chr2	gffcl	locus	125847392	125848495	.	-	.	ID=RLOC_00021385;geneIDs=ORF1439.path1;transcripts=ORF1439.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125847392	125848495	.	-	.	ID=ORF1439.mrna1;geneID=ORF1439.path1;Name=ORF1439;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1104;mismatches=0;indels=0;unknowns=0;Target=ORF1439 1104 1 .;locus=RLOC_00021385
Chr2	stalkie_big_nohaplotig	exon	125847392	125848495	100	-	.	Parent=ORF1439.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125847392	125848495	.	-	0	Parent=ORF1439.mrna1
Chr2	gffcl	locus	125850769	125851988	.	-	.	ID=RLOC_00021386;geneIDs=comp156345_c0_seq1.path1;transcripts=comp156345_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125850769	125851988	.	-	.	ID=comp156345_c0_seq1.mrna1;geneID=comp156345_c0_seq1.path1;Name=comp156345_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1218;mismatches=2;indels=2;unknowns=0;Target=comp156345_c0_seq1 1222 1 .;CDS_Target=comp156345_c0_seq1 443 3 .;locus=RLOC_00021386
Chr2	stalkie_big_nohaplotig	exon	125850769	125851988	99	-	.	Parent=comp156345_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125851546	125851986	.	-	0	Parent=comp156345_c0_seq1.mrna1
Chr2	gffcl	locus	125855726	125856385	.	+	.	ID=RLOC_00021387;geneIDs=comp152355_c0_seq1.path1;transcripts=comp152355_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125855726	125856385	.	+	.	ID=comp152355_c0_seq1.mrna1;geneID=comp152355_c0_seq1.path1;Name=comp152355_c0_seq1;Dir=indeterminatecoverage=99.1;identity=100.0;matches=660;mismatches=0;indels=0;unknowns=0;Target=comp152355_c0_seq1 660 1 .;CDS_Target=comp152355_c0_seq1 445 146 .;locus=RLOC_00021387
Chr2	stalkie_big_nohaplotig	exon	125855726	125856385	100	+	.	Parent=comp152355_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125855871	125856170	.	+	0	Parent=comp152355_c0_seq1.mrna1
Chr2	gffcl	locus	125862148	125862501	.	-	.	ID=RLOC_00021388;geneIDs=comp116306_c0_seq1.path1;transcripts=comp116306_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125862148	125862501	.	-	.	ID=comp116306_c0_seq1.mrna1;geneID=comp116306_c0_seq1.path1;Name=comp116306_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=354;mismatches=0;indels=0;unknowns=0;Target=comp116306_c0_seq1 354 1 .;CDS_Target=comp116306_c0_seq1 325 239 .;locus=RLOC_00021388
Chr2	stalkie_big_nohaplotig	exon	125862148	125862501	100	-	.	Parent=comp116306_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125862177	125862263	.	-	0	Parent=comp116306_c0_seq1.mrna1
Chr2	gffcl	locus	125866121	125876923	.	-	.	ID=RLOC_00021389;geneIDs=FBgn0038651.1.path1;transcripts=FBgn0038651.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125866121	125876923	.	-	.	ID=FBgn0038651.1.mrna1;geneID=FBgn0038651.1.path1;Name=FBgn0038651.1;Dir=sensecoverage=100.0;identity=99.9;matches=5760;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021389
Chr2	stalkie_big_nohaplotig	exon	125866121	125866367	100	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 5517 5763 +
Chr2	stalkie_big_nohaplotig	exon	125866434	125866493	100	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 5457 5516 +
Chr2	stalkie_big_nohaplotig	exon	125866554	125866754	100	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 5256 5456 +
Chr2	stalkie_big_nohaplotig	exon	125866821	125867198	100	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 4878 5255 +
Chr2	stalkie_big_nohaplotig	exon	125867263	125867583	100	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 4557 4877 +
Chr2	stalkie_big_nohaplotig	exon	125867829	125868163	99	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 4222 4556 +
Chr2	stalkie_big_nohaplotig	exon	125868218	125868390	98	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 4049 4221 +
Chr2	stalkie_big_nohaplotig	exon	125869369	125869587	100	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 3830 4048 +
Chr2	stalkie_big_nohaplotig	exon	125869649	125869832	100	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 3646 3829 +
Chr2	stalkie_big_nohaplotig	exon	125870518	125870886	100	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 3277 3645 +
Chr2	stalkie_big_nohaplotig	exon	125870956	125871159	100	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 3073 3276 +
Chr2	stalkie_big_nohaplotig	exon	125871219	125871369	100	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 2922 3072 +
Chr2	stalkie_big_nohaplotig	exon	125871431	125871739	100	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 2613 2921 +
Chr2	stalkie_big_nohaplotig	exon	125871820	125872115	100	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 2317 2612 +
Chr2	stalkie_big_nohaplotig	exon	125872187	125872310	100	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 2193 2316 +
Chr2	stalkie_big_nohaplotig	exon	125873010	125873174	100	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 2028 2192 +
Chr2	stalkie_big_nohaplotig	exon	125873235	125873407	100	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 1855 2027 +
Chr2	stalkie_big_nohaplotig	exon	125873482	125873697	100	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 1639 1854 +
Chr2	stalkie_big_nohaplotig	exon	125874011	125874185	100	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 1464 1638 +
Chr2	stalkie_big_nohaplotig	exon	125874242	125874385	100	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 1320 1463 +
Chr2	stalkie_big_nohaplotig	exon	125874444	125875261	100	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 502 1319 +
Chr2	stalkie_big_nohaplotig	exon	125875320	125875495	100	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 326 501 +
Chr2	stalkie_big_nohaplotig	exon	125875600	125875823	100	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 102 325 +
Chr2	stalkie_big_nohaplotig	exon	125876823	125876923	100	-	.	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 1 101 +
Chr2	stalkie_big_nohaplotig	CDS	125866121	125866367	.	-	1	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 5517 5763 +
Chr2	stalkie_big_nohaplotig	CDS	125866434	125866493	.	-	1	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 5457 5516 +
Chr2	stalkie_big_nohaplotig	CDS	125866554	125866754	.	-	1	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 5256 5456 +
Chr2	stalkie_big_nohaplotig	CDS	125866821	125867198	.	-	1	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 4878 5255 +
Chr2	stalkie_big_nohaplotig	CDS	125867263	125867583	.	-	1	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 4557 4877 +
Chr2	stalkie_big_nohaplotig	CDS	125867829	125868163	.	-	0	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 4222 4556 +
Chr2	stalkie_big_nohaplotig	CDS	125868218	125868390	.	-	2	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 4049 4221 +
Chr2	stalkie_big_nohaplotig	CDS	125869369	125869587	.	-	2	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 3830 4048 +
Chr2	stalkie_big_nohaplotig	CDS	125869649	125869832	.	-	0	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 3646 3829 +
Chr2	stalkie_big_nohaplotig	CDS	125870518	125870886	.	-	0	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 3277 3645 +
Chr2	stalkie_big_nohaplotig	CDS	125870956	125871159	.	-	0	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 3073 3276 +
Chr2	stalkie_big_nohaplotig	CDS	125871219	125871369	.	-	1	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 2922 3072 +
Chr2	stalkie_big_nohaplotig	CDS	125871431	125871739	.	-	1	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 2613 2921 +
Chr2	stalkie_big_nohaplotig	CDS	125871820	125872115	.	-	0	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 2317 2612 +
Chr2	stalkie_big_nohaplotig	CDS	125872187	125872310	.	-	1	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 2193 2316 +
Chr2	stalkie_big_nohaplotig	CDS	125873010	125873174	.	-	1	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 2028 2192 +
Chr2	stalkie_big_nohaplotig	CDS	125873235	125873407	.	-	0	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 1855 2027 +
Chr2	stalkie_big_nohaplotig	CDS	125873482	125873697	.	-	0	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 1639 1854 +
Chr2	stalkie_big_nohaplotig	CDS	125874011	125874185	.	-	1	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 1464 1638 +
Chr2	stalkie_big_nohaplotig	CDS	125874242	125874385	.	-	1	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 1320 1463 +
Chr2	stalkie_big_nohaplotig	CDS	125874444	125875261	.	-	0	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 502 1319 +
Chr2	stalkie_big_nohaplotig	CDS	125875320	125875495	.	-	2	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 326 501 +
Chr2	stalkie_big_nohaplotig	CDS	125875600	125875823	.	-	1	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 102 325 +
Chr2	stalkie_big_nohaplotig	CDS	125876823	125876923	.	-	0	Parent=FBgn0038651.1.mrna1;Target=FBgn0038651.1 1 101 +
Chr2	gffcl	locus	125879847	125880405	.	+	.	ID=RLOC_00021390;geneIDs=FBgn0260860.1.path1;transcripts=FBgn0260860.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125879847	125880405	.	+	.	ID=FBgn0260860.1.mrna1;geneID=FBgn0260860.1.path1;Name=FBgn0260860.1;Dir=sensecoverage=100.0;identity=98.6;matches=438;mismatches=6;indels=0;unknowns=0;locus=RLOC_00021390
Chr2	stalkie_big_nohaplotig	exon	125879847	125879954	99	+	.	Parent=FBgn0260860.1.mrna1;Target=FBgn0260860.1 1 108 +
Chr2	stalkie_big_nohaplotig	exon	125880013	125880155	99	+	.	Parent=FBgn0260860.1.mrna1;Target=FBgn0260860.1 109 251 +
Chr2	stalkie_big_nohaplotig	exon	125880213	125880405	97	+	.	Parent=FBgn0260860.1.mrna1;Target=FBgn0260860.1 252 444 +
Chr2	stalkie_big_nohaplotig	CDS	125879847	125879954	.	+	0	Parent=FBgn0260860.1.mrna1;Target=FBgn0260860.1 1 108 +
Chr2	stalkie_big_nohaplotig	CDS	125880013	125880155	.	+	0	Parent=FBgn0260860.1.mrna1;Target=FBgn0260860.1 109 251 +
Chr2	stalkie_big_nohaplotig	CDS	125880213	125880405	.	+	1	Parent=FBgn0260860.1.mrna1;Target=FBgn0260860.1 252 444 +
Chr2	gffcl	locus	125882461	125882737	.	-	.	ID=RLOC_00021391;geneIDs=comp74691_c0_seq1.path1;transcripts=comp74691_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	125882461	125882737	.	-	.	ID=comp74691_c0_seq1.mrna1;geneID=comp74691_c0_seq1.path1;Name=comp74691_c0_seq1;Dir=indeterminatecoverage=97.6;identity=98.6;matches=275;mismatches=2;indels=2;unknowns=0;Target=comp74691_c0_seq1 286 8 .;CDS_Target=comp74691_c0_seq1 165 97 .;locus=RLOC_00021391
Chr2	stalkie_big_nohaplotig	exon	125882461	125882737	98	-	.	Parent=comp74691_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	125882582	125882648	.	-	0	Parent=comp74691_c0_seq1.mrna1
Chr2	gffcl	locus	126074254	126077589	.	-	.	ID=RLOC_00021392;geneIDs=ORF57.path1;transcripts=ORF57.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126074254	126077589	.	-	.	ID=ORF57.mrna1;geneID=ORF57.path1;Name=ORF57;Dir=indeterminatecoverage=100.0;identity=99.9;matches=3333;mismatches=3;indels=0;unknowns=0;Target=ORF57 3336 1 .;locus=RLOC_00021392
Chr2	stalkie_big_nohaplotig	exon	126074254	126077589	99	-	.	Parent=ORF57.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126074254	126077589	.	-	0	Parent=ORF57.mrna1
Chr2	gffcl	locus	126222518	126222799	.	+	.	ID=RLOC_00021393;geneIDs=comp129446_c0_seq1.path1;transcripts=comp129446_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126222518	126222799	.	+	.	ID=comp129446_c0_seq1.mrna1;geneID=comp129446_c0_seq1.path1;Name=comp129446_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=281;mismatches=1;indels=1;unknowns=0;Target=comp129446_c0_seq1 283 1 .;CDS_Target=comp129446_c0_seq1 114 1 .;locus=RLOC_00021393
Chr2	stalkie_big_nohaplotig	exon	126222518	126222799	99	+	.	Parent=comp129446_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126222518	126222631	.	+	0	Parent=comp129446_c0_seq1.mrna1
Chr2	gffcl	locus	126222807	126222915	.	+	.	ID=RLOC_00021394;geneIDs=FBgn0038654.1.path1;transcripts=FBgn0038654.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126222807	126222915	.	+	.	ID=FBgn0038654.1.mrna1;geneID=FBgn0038654.1.path1;Name=FBgn0038654.1;Dir=indeterminatecoverage=37.1;identity=99.1;matches=108;mismatches=1;indels=0;unknowns=0;Target=FBgn0038654.1 109 1 .;locus=RLOC_00021394
Chr2	stalkie_big_nohaplotig	exon	126222807	126222915	99	+	.	Parent=FBgn0038654.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126222807	126222915	.	+	0	Parent=FBgn0038654.1.mrna1
Chr2	gffcl	locus	126251642	126255237	.	+	.	ID=RLOC_00021395;geneIDs=ORF92.path1;transcripts=ORF92.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126251642	126255237	.	+	.	ID=ORF92.mrna1;geneID=ORF92.path1;Name=ORF92;Dir=sensecoverage=99.7;identity=99.2;matches=3055;mismatches=24;indels=0;unknowns=0;locus=RLOC_00021395
Chr2	stalkie_big_nohaplotig	exon	126251642	126251692	100	+	.	Parent=ORF92.mrna1;Target=ORF92 9 59 +
Chr2	stalkie_big_nohaplotig	exon	126252210	126255237	99	+	.	Parent=ORF92.mrna1;Target=ORF92 60 3087 +
Chr2	stalkie_big_nohaplotig	CDS	126251643	126251692	.	+	0	Parent=ORF92.mrna1;Target=ORF92 10 59 +
Chr2	stalkie_big_nohaplotig	CDS	126252210	126255237	.	+	1	Parent=ORF92.mrna1;Target=ORF92 60 3087 +
Chr2	gffcl	locus	126265137	126265402	.	+	.	ID=RLOC_00021396;geneIDs=comp75268_c0_seq1.path1;transcripts=comp75268_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126265137	126265402	.	+	.	ID=comp75268_c0_seq1.mrna1;geneID=comp75268_c0_seq1.path1;Name=comp75268_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=266;mismatches=0;indels=0;unknowns=0;Target=comp75268_c0_seq1 266 1 .;CDS_Target=comp75268_c0_seq1 264 154 .;locus=RLOC_00021396
Chr2	stalkie_big_nohaplotig	exon	126265137	126265402	100	+	.	Parent=comp75268_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126265290	126265400	.	+	0	Parent=comp75268_c0_seq1.mrna1
Chr2	gffcl	locus	126277779	126283109	.	-	.	ID=RLOC_00021397;geneIDs=FBgn0038095.1.path1;transcripts=FBgn0038095.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126277779	126283109	.	-	.	ID=FBgn0038095.1.mrna1;geneID=FBgn0038095.1.path1;Name=FBgn0038095.1;Dir=sensecoverage=100.0;identity=99.9;matches=1588;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021397
Chr2	stalkie_big_nohaplotig	exon	126277779	126277960	100	-	.	Parent=FBgn0038095.1.mrna1;Target=FBgn0038095.1 1409 1590 +
Chr2	stalkie_big_nohaplotig	exon	126278026	126278170	99	-	.	Parent=FBgn0038095.1.mrna1;Target=FBgn0038095.1 1264 1408 +
Chr2	stalkie_big_nohaplotig	exon	126278231	126278815	100	-	.	Parent=FBgn0038095.1.mrna1;Target=FBgn0038095.1 679 1263 +
Chr2	stalkie_big_nohaplotig	exon	126279856	126280142	100	-	.	Parent=FBgn0038095.1.mrna1;Target=FBgn0038095.1 392 678 +
Chr2	stalkie_big_nohaplotig	exon	126282557	126282808	100	-	.	Parent=FBgn0038095.1.mrna1;Target=FBgn0038095.1 140 391 +
Chr2	stalkie_big_nohaplotig	exon	126282971	126283109	99	-	.	Parent=FBgn0038095.1.mrna1;Target=FBgn0038095.1 1 139 +
Chr2	stalkie_big_nohaplotig	CDS	126277779	126277960	.	-	2	Parent=FBgn0038095.1.mrna1;Target=FBgn0038095.1 1409 1590 +
Chr2	stalkie_big_nohaplotig	CDS	126278026	126278170	.	-	0	Parent=FBgn0038095.1.mrna1;Target=FBgn0038095.1 1264 1408 +
Chr2	stalkie_big_nohaplotig	CDS	126278231	126278815	.	-	0	Parent=FBgn0038095.1.mrna1;Target=FBgn0038095.1 679 1263 +
Chr2	stalkie_big_nohaplotig	CDS	126279856	126280142	.	-	2	Parent=FBgn0038095.1.mrna1;Target=FBgn0038095.1 392 678 +
Chr2	stalkie_big_nohaplotig	CDS	126282557	126282808	.	-	2	Parent=FBgn0038095.1.mrna1;Target=FBgn0038095.1 140 391 +
Chr2	stalkie_big_nohaplotig	CDS	126282971	126283109	.	-	0	Parent=FBgn0038095.1.mrna1;Target=FBgn0038095.1 1 139 +
Chr2	gffcl	locus	126287305	126290202	.	-	.	ID=RLOC_00021398;geneIDs=comp148930_c0_seq1.path1;transcripts=comp148930_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126287305	126290202	.	-	.	ID=comp148930_c0_seq1.mrna1;geneID=comp148930_c0_seq1.path1;Name=comp148930_c0_seq1;Dir=sensecoverage=99.6;identity=99.0;matches=1042;mismatches=10;indels=0;unknowns=0;locus=RLOC_00021398
Chr2	stalkie_big_nohaplotig	exon	126287305	126287838	99	-	.	Parent=comp148930_c0_seq1.mrna1;Target=comp148930_c0_seq1 519 1052 +
Chr2	stalkie_big_nohaplotig	exon	126287905	126288130	98	-	.	Parent=comp148930_c0_seq1.mrna1;Target=comp148930_c0_seq1 293 518 +
Chr2	stalkie_big_nohaplotig	exon	126288190	126288456	100	-	.	Parent=comp148930_c0_seq1.mrna1;Target=comp148930_c0_seq1 26 292 +
Chr2	stalkie_big_nohaplotig	exon	126290178	126290202	96	-	.	Parent=comp148930_c0_seq1.mrna1;Target=comp148930_c0_seq1 1 25 +
Chr2	stalkie_big_nohaplotig	CDS	126287574	126287838	.	-	1	Parent=comp148930_c0_seq1.mrna1;Target=comp148930_c0_seq1 519 783 +
Chr2	stalkie_big_nohaplotig	CDS	126287905	126288130	.	-	2	Parent=comp148930_c0_seq1.mrna1;Target=comp148930_c0_seq1 293 518 +
Chr2	stalkie_big_nohaplotig	CDS	126288190	126288304	.	-	0	Parent=comp148930_c0_seq1.mrna1;Target=comp148930_c0_seq1 178 292 +
Chr2	gffcl	locus	126307260	126309113	.	+	.	ID=RLOC_00021400;geneIDs=FBgn0037250.1.path1;transcripts=FBgn0037250.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126307260	126309113	.	+	.	ID=FBgn0037250.1.mrna1;geneID=FBgn0037250.1.path1;Name=FBgn0037250.1;Dir=sensecoverage=100.0;identity=98.0;matches=1453;mismatches=29;indels=1;unknowns=0;locus=RLOC_00021400
Chr2	stalkie_big_nohaplotig	exon	126307260	126307350	93	+	.	Parent=FBgn0037250.1.mrna1;Target=FBgn0037250.1 1 90 +
Chr2	stalkie_big_nohaplotig	exon	126307408	126307470	100	+	.	Parent=FBgn0037250.1.mrna1;Target=FBgn0037250.1 91 153 +
Chr2	stalkie_big_nohaplotig	exon	126307534	126307926	97	+	.	Parent=FBgn0037250.1.mrna1;Target=FBgn0037250.1 154 546 +
Chr2	stalkie_big_nohaplotig	exon	126307988	126308177	98	+	.	Parent=FBgn0037250.1.mrna1;Target=FBgn0037250.1 547 736 +
Chr2	stalkie_big_nohaplotig	exon	126308244	126308456	98	+	.	Parent=FBgn0037250.1.mrna1;Target=FBgn0037250.1 737 949 +
Chr2	stalkie_big_nohaplotig	exon	126308521	126308719	98	+	.	Parent=FBgn0037250.1.mrna1;Target=FBgn0037250.1 950 1148 +
Chr2	stalkie_big_nohaplotig	exon	126308780	126309113	97	+	.	Parent=FBgn0037250.1.mrna1;Target=FBgn0037250.1 1149 1482 +
Chr2	stalkie_big_nohaplotig	CDS	126307285	126307350	.	+	0	Parent=FBgn0037250.1.mrna1;Target=FBgn0037250.1 25 90 +
Chr2	stalkie_big_nohaplotig	CDS	126307408	126307470	.	+	0	Parent=FBgn0037250.1.mrna1;Target=FBgn0037250.1 91 153 +
Chr2	stalkie_big_nohaplotig	CDS	126307534	126307926	.	+	0	Parent=FBgn0037250.1.mrna1;Target=FBgn0037250.1 154 546 +
Chr2	stalkie_big_nohaplotig	CDS	126307988	126308177	.	+	0	Parent=FBgn0037250.1.mrna1;Target=FBgn0037250.1 547 736 +
Chr2	stalkie_big_nohaplotig	CDS	126308244	126308456	.	+	2	Parent=FBgn0037250.1.mrna1;Target=FBgn0037250.1 737 949 +
Chr2	stalkie_big_nohaplotig	CDS	126308521	126308719	.	+	2	Parent=FBgn0037250.1.mrna1;Target=FBgn0037250.1 950 1148 +
Chr2	stalkie_big_nohaplotig	CDS	126308780	126309113	.	+	1	Parent=FBgn0037250.1.mrna1;Target=FBgn0037250.1 1149 1482 +
Chr2	gffcl	locus	126309219	126309938	.	-	.	ID=RLOC_00021401;geneIDs=FBgn0037251.1.path1;transcripts=FBgn0037251.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126309219	126309938	.	-	.	ID=FBgn0037251.1.mrna1;geneID=FBgn0037251.1.path1;Name=FBgn0037251.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=716;mismatches=4;indels=0;unknowns=0;Target=FBgn0037251.1 720 1 .;locus=RLOC_00021401
Chr2	stalkie_big_nohaplotig	exon	126309219	126309938	99	-	.	Parent=FBgn0037251.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126309219	126309938	.	-	0	Parent=FBgn0037251.1.mrna1
Chr2	gffcl	locus	126319533	126362287	.	-	.	ID=RLOC_00021402;geneIDs=FBgn0259938.1.path1;transcripts=FBgn0259938.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126319533	126362287	.	-	.	ID=FBgn0259938.1.mrna1;geneID=FBgn0259938.1.path1;Name=FBgn0259938.1;Dir=sensecoverage=100.0;identity=99.9;matches=1387;mismatches=1;indels=1;unknowns=0;locus=RLOC_00021402
Chr2	stalkie_big_nohaplotig	exon	126319533	126320400	99	-	.	Parent=FBgn0259938.1.mrna1;Target=FBgn0259938.1 521 1389 +
Chr2	stalkie_big_nohaplotig	exon	126320474	126320795	100	-	.	Parent=FBgn0259938.1.mrna1;Target=FBgn0259938.1 199 520 +
Chr2	stalkie_big_nohaplotig	exon	126321356	126321518	100	-	.	Parent=FBgn0259938.1.mrna1;Target=FBgn0259938.1 36 198 +
Chr2	stalkie_big_nohaplotig	exon	126362253	126362287	100	-	.	Parent=FBgn0259938.1.mrna1;Target=FBgn0259938.1 1 35 +
Chr2	stalkie_big_nohaplotig	CDS	126319533	126320400	.	-	2	Parent=FBgn0259938.1.mrna1;Target=FBgn0259938.1 521 1389 +
Chr2	stalkie_big_nohaplotig	CDS	126320474	126320795	.	-	0	Parent=FBgn0259938.1.mrna1;Target=FBgn0259938.1 199 520 +
Chr2	stalkie_big_nohaplotig	CDS	126321356	126321518	.	-	1	Parent=FBgn0259938.1.mrna1;Target=FBgn0259938.1 36 198 +
Chr2	stalkie_big_nohaplotig	CDS	126362253	126362287	.	-	0	Parent=FBgn0259938.1.mrna1;Target=FBgn0259938.1 1 35 +
Chr2	gffcl	locus	126382857	126383647	.	-	.	ID=RLOC_00021403;geneIDs=comp116744_c1_seq1.path1;transcripts=comp116744_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126382857	126383647	.	-	.	ID=comp116744_c1_seq1.mrna1;geneID=comp116744_c1_seq1.path1;Name=comp116744_c1_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=629;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021403
Chr2	stalkie_big_nohaplotig	exon	126382857	126383453	99	-	.	Parent=comp116744_c1_seq1.mrna1;Target=comp116744_c1_seq1 35 631 +
Chr2	stalkie_big_nohaplotig	exon	126383614	126383647	100	-	.	Parent=comp116744_c1_seq1.mrna1;Target=comp116744_c1_seq1 1 34 +
Chr2	stalkie_big_nohaplotig	CDS	126383423	126383453	.	-	1	Parent=comp116744_c1_seq1.mrna1;Target=comp116744_c1_seq1 35 65 +
Chr2	stalkie_big_nohaplotig	CDS	126383614	126383645	.	-	0	Parent=comp116744_c1_seq1.mrna1;Target=comp116744_c1_seq1 3 34 +
Chr2	gffcl	locus	126400964	126434083	.	-	.	ID=RLOC_00021404;geneIDs=comp158999_c0_seq1.path1;transcripts=comp158999_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126400964	126434083	.	-	.	ID=comp158999_c0_seq1.mrna1;geneID=comp158999_c0_seq1.path1;Name=comp158999_c0_seq1;Dir=indeterminatecoverage=78.1;identity=96.6;matches=896;mismatches=19;indels=13;unknowns=0;Target=comp158999_c0_seq1 292 116 .;locus=RLOC_00021404
Chr2	stalkie_big_nohaplotig	exon	126400964	126400971	100	-	.	Parent=comp158999_c0_seq1.mrna1;Target=comp158999_c0_seq1 1037 1030 .
Chr2	stalkie_big_nohaplotig	exon	126425184	126425192	100	-	.	Parent=comp158999_c0_seq1.mrna1;Target=comp158999_c0_seq1 1029 1021 .
Chr2	stalkie_big_nohaplotig	exon	126433181	126434083	96	-	.	Parent=comp158999_c0_seq1.mrna1;Target=comp158999_c0_seq1 1020 115 .
Chr2	stalkie_big_nohaplotig	CDS	126433914	126434082	.	-	0	Parent=comp158999_c0_seq1.mrna1
Chr2	gffcl	locus	126411586	126412622	.	+	.	ID=RLOC_00021405;geneIDs=FBgn0038925.1.path1;transcripts=FBgn0038925.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126411586	126412622	.	+	.	ID=FBgn0038925.1.mrna1;geneID=FBgn0038925.1.path1;Name=FBgn0038925.1;Dir=sensecoverage=100.0;identity=99.2;matches=866;mismatches=7;indels=0;unknowns=0;locus=RLOC_00021405
Chr2	stalkie_big_nohaplotig	exon	126411586	126411606	95	+	.	Parent=FBgn0038925.1.mrna1;Target=FBgn0038925.1 1 21 +
Chr2	stalkie_big_nohaplotig	exon	126411718	126412301	99	+	.	Parent=FBgn0038925.1.mrna1;Target=FBgn0038925.1 22 605 +
Chr2	stalkie_big_nohaplotig	exon	126412355	126412622	99	+	.	Parent=FBgn0038925.1.mrna1;Target=FBgn0038925.1 606 873 +
Chr2	stalkie_big_nohaplotig	CDS	126411586	126411606	.	+	0	Parent=FBgn0038925.1.mrna1;Target=FBgn0038925.1 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	126411718	126412301	.	+	0	Parent=FBgn0038925.1.mrna1;Target=FBgn0038925.1 22 605 +
Chr2	stalkie_big_nohaplotig	CDS	126412355	126412622	.	+	1	Parent=FBgn0038925.1.mrna1;Target=FBgn0038925.1 606 873 +
Chr2	gffcl	locus	126413473	126417264	.	-	.	ID=RLOC_00021406;geneIDs=FBgn0019960.1.path1;transcripts=FBgn0019960.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126413473	126417264	.	-	.	ID=FBgn0019960.1.mrna1;geneID=FBgn0019960.1.path1;Name=FBgn0019960.1;Dir=sensecoverage=100.0;identity=99.7;matches=2078;mismatches=7;indels=0;unknowns=0;locus=RLOC_00021406
Chr2	stalkie_big_nohaplotig	exon	126413473	126413647	98	-	.	Parent=FBgn0019960.1.mrna1;Target=FBgn0019960.1 1911 2085 +
Chr2	stalkie_big_nohaplotig	exon	126413703	126413991	100	-	.	Parent=FBgn0019960.1.mrna1;Target=FBgn0019960.1 1622 1910 +
Chr2	stalkie_big_nohaplotig	exon	126414058	126414216	99	-	.	Parent=FBgn0019960.1.mrna1;Target=FBgn0019960.1 1463 1621 +
Chr2	stalkie_big_nohaplotig	exon	126414412	126414940	100	-	.	Parent=FBgn0019960.1.mrna1;Target=FBgn0019960.1 934 1462 +
Chr2	stalkie_big_nohaplotig	exon	126415009	126415175	100	-	.	Parent=FBgn0019960.1.mrna1;Target=FBgn0019960.1 767 933 +
Chr2	stalkie_big_nohaplotig	exon	126415895	126416043	100	-	.	Parent=FBgn0019960.1.mrna1;Target=FBgn0019960.1 618 766 +
Chr2	stalkie_big_nohaplotig	exon	126416110	126416273	99	-	.	Parent=FBgn0019960.1.mrna1;Target=FBgn0019960.1 454 617 +
Chr2	stalkie_big_nohaplotig	exon	126416363	126416424	96	-	.	Parent=FBgn0019960.1.mrna1;Target=FBgn0019960.1 392 453 +
Chr2	stalkie_big_nohaplotig	exon	126416485	126416678	100	-	.	Parent=FBgn0019960.1.mrna1;Target=FBgn0019960.1 198 391 +
Chr2	stalkie_big_nohaplotig	exon	126416735	126416868	100	-	.	Parent=FBgn0019960.1.mrna1;Target=FBgn0019960.1 64 197 +
Chr2	stalkie_big_nohaplotig	exon	126417202	126417264	100	-	.	Parent=FBgn0019960.1.mrna1;Target=FBgn0019960.1 1 63 +
Chr2	stalkie_big_nohaplotig	CDS	126413473	126413647	.	-	1	Parent=FBgn0019960.1.mrna1;Target=FBgn0019960.1 1911 2085 +
Chr2	stalkie_big_nohaplotig	CDS	126413703	126413991	.	-	2	Parent=FBgn0019960.1.mrna1;Target=FBgn0019960.1 1622 1910 +
Chr2	stalkie_big_nohaplotig	CDS	126414058	126414216	.	-	2	Parent=FBgn0019960.1.mrna1;Target=FBgn0019960.1 1463 1621 +
Chr2	stalkie_big_nohaplotig	CDS	126414412	126414940	.	-	0	Parent=FBgn0019960.1.mrna1;Target=FBgn0019960.1 934 1462 +
Chr2	stalkie_big_nohaplotig	CDS	126415009	126415175	.	-	2	Parent=FBgn0019960.1.mrna1;Target=FBgn0019960.1 767 933 +
Chr2	stalkie_big_nohaplotig	CDS	126415895	126416043	.	-	1	Parent=FBgn0019960.1.mrna1;Target=FBgn0019960.1 618 766 +
Chr2	stalkie_big_nohaplotig	CDS	126416110	126416273	.	-	0	Parent=FBgn0019960.1.mrna1;Target=FBgn0019960.1 454 617 +
Chr2	stalkie_big_nohaplotig	CDS	126416363	126416424	.	-	2	Parent=FBgn0019960.1.mrna1;Target=FBgn0019960.1 392 453 +
Chr2	stalkie_big_nohaplotig	CDS	126416485	126416678	.	-	1	Parent=FBgn0019960.1.mrna1;Target=FBgn0019960.1 198 391 +
Chr2	stalkie_big_nohaplotig	CDS	126416735	126416868	.	-	0	Parent=FBgn0019960.1.mrna1;Target=FBgn0019960.1 64 197 +
Chr2	stalkie_big_nohaplotig	CDS	126417202	126417264	.	-	0	Parent=FBgn0019960.1.mrna1;Target=FBgn0019960.1 1 63 +
Chr2	gffcl	locus	126417877	126418740	.	+	.	ID=RLOC_00021407;geneIDs=FBgn0038922.1.path1;transcripts=FBgn0038922.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126417877	126418740	.	+	.	ID=FBgn0038922.1.mrna1;geneID=FBgn0038922.1.path1;Name=FBgn0038922.1;Dir=sensecoverage=67.1;identity=99.9;matches=744;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021407
Chr2	stalkie_big_nohaplotig	exon	126417877	126418267	100	+	.	Parent=FBgn0038922.1.mrna1;Target=FBgn0038922.1 366 756 +
Chr2	stalkie_big_nohaplotig	exon	126418331	126418456	99	+	.	Parent=FBgn0038922.1.mrna1;Target=FBgn0038922.1 757 882 +
Chr2	stalkie_big_nohaplotig	exon	126418513	126418740	100	+	.	Parent=FBgn0038922.1.mrna1;Target=FBgn0038922.1 883 1110 +
Chr2	stalkie_big_nohaplotig	CDS	126417878	126418267	.	+	0	Parent=FBgn0038922.1.mrna1;Target=FBgn0038922.1 367 756 +
Chr2	stalkie_big_nohaplotig	CDS	126418331	126418456	.	+	0	Parent=FBgn0038922.1.mrna1;Target=FBgn0038922.1 757 882 +
Chr2	stalkie_big_nohaplotig	CDS	126418513	126418740	.	+	0	Parent=FBgn0038922.1.mrna1;Target=FBgn0038922.1 883 1110 +
Chr2	gffcl	locus	126421329	126423389	.	+	.	ID=RLOC_00021408;geneIDs=FBgn0038921.2.path1;transcripts=FBgn0038921.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126421329	126423389	.	+	.	ID=FBgn0038921.2.mrna1;geneID=FBgn0038921.2.path1;Name=FBgn0038921.2;Dir=sensecoverage=100.0;identity=99.3;matches=1037;mismatches=7;indels=0;unknowns=0;locus=RLOC_00021408
Chr2	stalkie_big_nohaplotig	exon	126421329	126421660	98	+	.	Parent=FBgn0038921.2.mrna1;Target=FBgn0038921.2 1 332 +
Chr2	stalkie_big_nohaplotig	exon	126421725	126421862	99	+	.	Parent=FBgn0038921.2.mrna1;Target=FBgn0038921.2 333 470 +
Chr2	stalkie_big_nohaplotig	exon	126422676	126422778	100	+	.	Parent=FBgn0038921.2.mrna1;Target=FBgn0038921.2 471 573 +
Chr2	stalkie_big_nohaplotig	exon	126422848	126423064	99	+	.	Parent=FBgn0038921.2.mrna1;Target=FBgn0038921.2 574 790 +
Chr2	stalkie_big_nohaplotig	exon	126423136	126423389	99	+	.	Parent=FBgn0038921.2.mrna1;Target=FBgn0038921.2 791 1044 +
Chr2	stalkie_big_nohaplotig	CDS	126421329	126421660	.	+	0	Parent=FBgn0038921.2.mrna1;Target=FBgn0038921.2 1 332 +
Chr2	stalkie_big_nohaplotig	CDS	126421725	126421862	.	+	1	Parent=FBgn0038921.2.mrna1;Target=FBgn0038921.2 333 470 +
Chr2	stalkie_big_nohaplotig	CDS	126422676	126422778	.	+	1	Parent=FBgn0038921.2.mrna1;Target=FBgn0038921.2 471 573 +
Chr2	stalkie_big_nohaplotig	CDS	126422848	126423064	.	+	0	Parent=FBgn0038921.2.mrna1;Target=FBgn0038921.2 574 790 +
Chr2	stalkie_big_nohaplotig	CDS	126423136	126423389	.	+	2	Parent=FBgn0038921.2.mrna1;Target=FBgn0038921.2 791 1044 +
Chr2	gffcl	locus	126425113	126427577	.	+	.	ID=RLOC_00021409;geneIDs=FBgn0038921.1.path1;transcripts=FBgn0038921.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126425113	126427577	.	+	.	ID=FBgn0038921.1.mrna1;geneID=FBgn0038921.1.path1;Name=FBgn0038921.1;Dir=sensecoverage=55.1;identity=99.8;matches=611;mismatches=1;indels=0;unknowns=100;locus=RLOC_00021409
Chr2	stalkie_big_nohaplotig	exon	126425113	126425432	100	+	.	Parent=FBgn0038921.1.mrna1;Target=FBgn0038921.1 1 320 +
Chr2	stalkie_big_nohaplotig	exon	126425505	126425742	100	+	.	Parent=FBgn0038921.1.mrna1;Target=FBgn0038921.1 321 558 +
Chr2	stalkie_big_nohaplotig	exon	126427424	126427577	98	+	.	Parent=FBgn0038921.1.mrna1;Target=FBgn0038921.1 559 712 +
Chr2	stalkie_big_nohaplotig	CDS	126425113	126425432	.	+	0	Parent=FBgn0038921.1.mrna1;Target=FBgn0038921.1 1 320 +
Chr2	stalkie_big_nohaplotig	CDS	126425505	126425742	.	+	1	Parent=FBgn0038921.1.mrna1;Target=FBgn0038921.1 321 558 +
Chr2	stalkie_big_nohaplotig	CDS	126427424	126427576	.	+	0	Parent=FBgn0038921.1.mrna1;Target=FBgn0038921.1 559 711 +
Chr2	gffcl	locus	126431753	126432471	.	+	.	ID=RLOC_00021410;geneIDs=comp154314_c0_seq1.path1;transcripts=comp154314_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126431753	126432471	.	+	.	ID=comp154314_c0_seq1.mrna1;geneID=comp154314_c0_seq1.path1;Name=comp154314_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=704;mismatches=15;indels=2;unknowns=0;Target=comp154314_c0_seq1 721 1 .;CDS_Target=comp154314_c0_seq1 113 3 .;locus=RLOC_00021410
Chr2	stalkie_big_nohaplotig	exon	126431753	126432471	97	+	.	Parent=comp154314_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126431755	126431865	.	+	0	Parent=comp154314_c0_seq1.mrna1
Chr2	gffcl	locus	126435183	126435536	.	+	.	ID=RLOC_00021411;geneIDs=comp152591_c0_seq1.path1;transcripts=comp152591_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126435183	126435536	.	+	.	ID=comp152591_c0_seq1.mrna1;geneID=comp152591_c0_seq1.path1;Name=comp152591_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.8;matches=326;mismatches=11;indels=18;unknowns=0;Target=comp152591_c0_seq1 338 1 .;CDS_Target=comp152591_c0_seq1 263 192 .;locus=RLOC_00021411
Chr2	stalkie_big_nohaplotig	exon	126435183	126435536	91	+	.	Parent=comp152591_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126435391	126435462	.	+	0	Parent=comp152591_c0_seq1.mrna1
Chr2	gffcl	locus	126435817	126436007	.	+	.	ID=RLOC_00021412;geneIDs=comp717074_c0_seq1.path1;transcripts=comp717074_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126435817	126436007	.	+	.	ID=comp717074_c0_seq1.mrna1;geneID=comp717074_c0_seq1.path1;Name=comp717074_c0_seq1;Dir=indeterminatecoverage=89.7;identity=100.0;matches=191;mismatches=0;indels=0;unknowns=0;Target=comp717074_c0_seq1 191 1 .;CDS_Target=comp717074_c0_seq1 53 3 .;locus=RLOC_00021412
Chr2	stalkie_big_nohaplotig	exon	126435817	126436007	100	+	.	Parent=comp717074_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126435819	126435869	.	+	0	Parent=comp717074_c0_seq1.mrna1
Chr2	gffcl	locus	126436385	126436897	.	+	.	ID=RLOC_00021413;geneIDs=comp89854_c0_seq1.path1,comp112439_c0_seq1.path1;transcripts=comp89854_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126436575	126436897	.	+	.	ID=comp89854_c0_seq1.mrna1;geneID=comp89854_c0_seq1.path1;Name=comp89854_c0_seq1;Dir=indeterminatecoverage=88.8;identity=99.1;matches=321;mismatches=2;indels=1;unknowns=0;Target=comp89854_c0_seq1 350 27 .;CDS_Target=comp89854_c0_seq1 84 28 .;locus=RLOC_00021413
Chr2	stalkie_big_nohaplotig	exon	126436575	126436897	99	+	.	Parent=comp89854_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126436576	126436632	.	+	0	Parent=comp89854_c0_seq1.mrna1
Chr2	gffcl	locus	126437261	126437913	.	+	.	ID=RLOC_00021414;geneIDs=comp116529_c0_seq1.path1;transcripts=comp116529_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126437261	126437913	.	+	.	ID=comp116529_c0_seq1.mrna1;geneID=comp116529_c0_seq1.path1;Name=comp116529_c0_seq1;Dir=indeterminatecoverage=92.9;identity=99.7;matches=651;mismatches=2;indels=0;unknowns=0;Target=comp116529_c0_seq1 653 1 .;CDS_Target=comp116529_c0_seq1 289 113 .;locus=RLOC_00021414
Chr2	stalkie_big_nohaplotig	exon	126437261	126437913	99	+	.	Parent=comp116529_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126437373	126437549	.	+	0	Parent=comp116529_c0_seq1.mrna1
Chr2	gffcl	locus	126438142	126438945	.	+	.	ID=RLOC_00021415;geneIDs=comp152165_c0_seq1.path1;transcripts=comp152165_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126438142	126438945	.	+	.	ID=comp152165_c0_seq1.mrna1;geneID=comp152165_c0_seq1.path1;Name=comp152165_c0_seq1;Dir=indeterminatecoverage=92.7;identity=99.5;matches=801;mismatches=3;indels=1;unknowns=0;Target=comp152165_c0_seq1 805 1 .;CDS_Target=comp152165_c0_seq1 240 193 .;locus=RLOC_00021415
Chr2	stalkie_big_nohaplotig	exon	126438142	126438945	99	+	.	Parent=comp152165_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126438334	126438381	.	+	0	Parent=comp152165_c0_seq1.mrna1
Chr2	gffcl	locus	126439024	126439364	.	+	.	ID=RLOC_00021416;geneIDs=comp150805_c0_seq1.path1;transcripts=comp150805_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126439024	126439364	.	+	.	ID=comp150805_c0_seq1.mrna1;geneID=comp150805_c0_seq1.path1;Name=comp150805_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=341;mismatches=0;indels=0;unknowns=0;Target=comp150805_c0_seq1 341 1 .;CDS_Target=comp150805_c0_seq1 312 223 .;locus=RLOC_00021416
Chr2	stalkie_big_nohaplotig	exon	126439024	126439364	100	+	.	Parent=comp150805_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126439246	126439335	.	+	0	Parent=comp150805_c0_seq1.mrna1
Chr2	gffcl	locus	126440564	126441278	.	-	.	ID=RLOC_00021417;geneIDs=comp135015_c0_seq1.path1;transcripts=comp135015_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126440564	126441278	.	-	.	ID=comp135015_c0_seq1.mrna1;geneID=comp135015_c0_seq1.path1;Name=comp135015_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.3;matches=710;mismatches=5;indels=0;unknowns=0;Target=comp135015_c0_seq1 715 1 .;CDS_Target=comp135015_c0_seq1 412 260 .;locus=RLOC_00021417
Chr2	stalkie_big_nohaplotig	exon	126440564	126441278	99	-	.	Parent=comp135015_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126440867	126441019	.	-	0	Parent=comp135015_c0_seq1.mrna1
Chr2	gffcl	locus	126441495	126442192	.	+	.	ID=RLOC_00021418;geneIDs=comp154398_c0_seq1.path1;transcripts=comp154398_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126441495	126442192	.	+	.	ID=comp154398_c0_seq1.mrna1;geneID=comp154398_c0_seq1.path1;Name=comp154398_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.0;matches=679;mismatches=17;indels=4;unknowns=0;Target=comp154398_c0_seq1 698 1 .;CDS_Target=comp154398_c0_seq1 317 300 .;locus=RLOC_00021418
Chr2	stalkie_big_nohaplotig	exon	126441495	126442192	97	+	.	Parent=comp154398_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126441793	126441809	.	+	0	Parent=comp154398_c0_seq1.mrna1
Chr2	gffcl	locus	126443973	126444348	.	-	.	ID=RLOC_00021419;geneIDs=comp49149_c0_seq1.path1;transcripts=comp49149_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126443973	126444348	.	-	.	ID=comp49149_c0_seq1.mrna1;geneID=comp49149_c0_seq1.path1;Name=comp49149_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=376;mismatches=0;indels=0;unknowns=0;Target=comp49149_c0_seq1 376 1 .;CDS_Target=comp49149_c0_seq1 287 3 .;locus=RLOC_00021419
Chr2	stalkie_big_nohaplotig	exon	126443973	126444348	100	-	.	Parent=comp49149_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126444062	126444346	.	-	0	Parent=comp49149_c0_seq1.mrna1
Chr2	gffcl	locus	126445871	126446211	.	-	.	ID=RLOC_00021420;geneIDs=comp146606_c0_seq1.path1;transcripts=comp146606_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126445871	126446211	.	-	.	ID=comp146606_c0_seq1.mrna1;geneID=comp146606_c0_seq1.path1;Name=comp146606_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=340;mismatches=1;indels=0;unknowns=0;Target=comp146606_c0_seq1 342 2 .;CDS_Target=comp146606_c0_seq1 116 3 .;locus=RLOC_00021420
Chr2	stalkie_big_nohaplotig	exon	126445871	126446211	99	-	.	Parent=comp146606_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126446097	126446210	.	-	0	Parent=comp146606_c0_seq1.mrna1
Chr2	gffcl	locus	126447200	126449281	.	-	.	ID=RLOC_00021421;geneIDs=FBgn0264490.1.path1;transcripts=FBgn0264490.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126447200	126449281	.	-	.	ID=FBgn0264490.1.mrna1;geneID=FBgn0264490.1.path1;Name=FBgn0264490.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=2069;mismatches=13;indels=0;unknowns=0;Target=FBgn0264490.1 2082 1 .;locus=RLOC_00021421
Chr2	stalkie_big_nohaplotig	exon	126447200	126449281	99	-	.	Parent=FBgn0264490.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126447200	126449281	.	-	0	Parent=FBgn0264490.1.mrna1
Chr2	gffcl	locus	126483719	126484142	.	-	.	ID=RLOC_00021422;geneIDs=comp138722_c0_seq1.path1;transcripts=comp138722_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126483719	126484142	.	-	.	ID=comp138722_c0_seq1.mrna1;geneID=comp138722_c0_seq1.path1;Name=comp138722_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=424;mismatches=0;indels=0;unknowns=0;Target=comp138722_c0_seq1 424 1 .;CDS_Target=comp138722_c0_seq1 418 188 .;locus=RLOC_00021422
Chr2	stalkie_big_nohaplotig	exon	126483719	126484142	100	-	.	Parent=comp138722_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126483725	126483955	.	-	0	Parent=comp138722_c0_seq1.mrna1
Chr2	gffcl	locus	126519753	126651593	.	+	.	ID=RLOC_00021423;geneIDs=ORF234.path1,comp158550_c1_seq1.path1;transcripts=comp158550_c1_seq1.mrna1,ORF234.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126519753	126651593	.	+	.	ID=comp158550_c1_seq1.mrna1;geneID=comp158550_c1_seq1.path1;Name=comp158550_c1_seq1;Dir=indeterminatecoverage=79.9;identity=92.8;matches=922;mismatches=56;indels=16;unknowns=0;Target=comp158550_c1_seq1 380 270 .;locus=RLOC_00021423
Chr2	stalkie_big_nohaplotig	exon	126519753	126520418	99	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 680 12 .
Chr2	stalkie_big_nohaplotig	exon	126522058	126522067	100	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 694 685 .
Chr2	stalkie_big_nohaplotig	exon	126523659	126523667	100	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 703 695 .
Chr2	stalkie_big_nohaplotig	exon	126528265	126528270	100	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 709 704 .
Chr2	stalkie_big_nohaplotig	exon	126529368	126529375	100	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 717 710 .
Chr2	stalkie_big_nohaplotig	exon	126548207	126548228	84	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 742 718 .
Chr2	stalkie_big_nohaplotig	exon	126550003	126550010	100	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 752 745 .
Chr2	stalkie_big_nohaplotig	exon	126550036	126550043	100	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 822 815 .
Chr2	stalkie_big_nohaplotig	exon	126550325	126550365	67	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 865 823 .
Chr2	stalkie_big_nohaplotig	exon	126556431	126556436	100	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 871 866 .
Chr2	stalkie_big_nohaplotig	exon	126560637	126560644	100	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 879 872 .
Chr2	stalkie_big_nohaplotig	exon	126567054	126567056	100	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 882 880 .
Chr2	stalkie_big_nohaplotig	exon	126568652	126568663	83	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 894 883 .
Chr2	stalkie_big_nohaplotig	exon	126570885	126570893	100	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 903 895 .
Chr2	stalkie_big_nohaplotig	exon	126571414	126571459	41	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 979 939 .
Chr2	stalkie_big_nohaplotig	exon	126579758	126579767	100	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 989 980 .
Chr2	stalkie_big_nohaplotig	exon	126586205	126586233	44	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 1015 990 .
Chr2	stalkie_big_nohaplotig	exon	126593682	126593686	100	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 1020 1016 .
Chr2	stalkie_big_nohaplotig	exon	126594431	126594438	100	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 1028 1021 .
Chr2	stalkie_big_nohaplotig	exon	126596200	126596215	87	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 1044 1029 .
Chr2	stalkie_big_nohaplotig	exon	126597828	126597829	100	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 1046 1045 .
Chr2	stalkie_big_nohaplotig	exon	126602535	126602538	100	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 1050 1047 .
Chr2	stalkie_big_nohaplotig	exon	126609523	126609526	100	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 1054 1051 .
Chr2	stalkie_big_nohaplotig	exon	126622188	126622191	100	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 1058 1055 .
Chr2	stalkie_big_nohaplotig	exon	126628256	126628263	100	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 1066 1059 .
Chr2	stalkie_big_nohaplotig	exon	126631899	126631911	84	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 1079 1067 .
Chr2	stalkie_big_nohaplotig	exon	126635520	126635524	100	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 1084 1080 .
Chr2	stalkie_big_nohaplotig	exon	126637599	126637608	100	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 1094 1085 .
Chr2	stalkie_big_nohaplotig	exon	126651589	126651593	100	+	.	Parent=comp158550_c1_seq1.mrna1;Target=comp158550_c1_seq1 1162 1158 .
Chr2	stalkie_big_nohaplotig	CDS	126520010	126520120	.	+	0	Parent=comp158550_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126563438	126569550	.	+	.	ID=ORF234.mrna1;geneID=ORF234.path1;Name=ORF234;Dir=sensecoverage=100.0;identity=99.9;matches=2310;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021423
Chr2	stalkie_big_nohaplotig	exon	126563438	126563525	100	+	.	Parent=ORF234.mrna1;Target=ORF234 1 88 +
Chr2	stalkie_big_nohaplotig	exon	126567238	126567353	100	+	.	Parent=ORF234.mrna1;Target=ORF234 89 204 +
Chr2	stalkie_big_nohaplotig	exon	126567442	126569550	99	+	.	Parent=ORF234.mrna1;Target=ORF234 205 2313 +
Chr2	stalkie_big_nohaplotig	CDS	126563438	126563525	.	+	0	Parent=ORF234.mrna1;Target=ORF234 1 88 +
Chr2	stalkie_big_nohaplotig	CDS	126567238	126567353	.	+	2	Parent=ORF234.mrna1;Target=ORF234 89 204 +
Chr2	stalkie_big_nohaplotig	CDS	126567442	126569550	.	+	0	Parent=ORF234.mrna1;Target=ORF234 205 2313 +
Chr2	gffcl	locus	126605345	126607969	.	+	.	ID=RLOC_00021424;geneIDs=comp163168_c0_seq1.path2;transcripts=comp163168_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	126605345	126607969	.	+	.	ID=comp163168_c0_seq1.mrna2;geneID=comp163168_c0_seq1.path2;Name=comp163168_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=2314;mismatches=11;indels=5;unknowns=0;Target=comp163168_c0_seq1 1091 2008 +;locus=RLOC_00021424
Chr2	stalkie_big_nohaplotig	exon	126605345	126605576	98	+	.	Parent=comp163168_c0_seq1.mrna2;Target=comp163168_c0_seq1 1 232 +
Chr2	stalkie_big_nohaplotig	exon	126605700	126605902	99	+	.	Parent=comp163168_c0_seq1.mrna2;Target=comp163168_c0_seq1 233 435 +
Chr2	stalkie_big_nohaplotig	exon	126606022	126606054	100	+	.	Parent=comp163168_c0_seq1.mrna2;Target=comp163168_c0_seq1 436 468 +
Chr2	stalkie_big_nohaplotig	exon	126606113	126607969	99	+	.	Parent=comp163168_c0_seq1.mrna2;Target=comp163168_c0_seq1 469 2330 +
Chr2	stalkie_big_nohaplotig	CDS	126606731	126607647	.	+	0	Parent=comp163168_c0_seq1.mrna2
Chr2	gffcl	locus	126631760	126634211	.	+	.	ID=RLOC_00021426;geneIDs=comp152432_c0_seq1.path1;transcripts=comp152432_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126631760	126634211	.	+	.	ID=comp152432_c0_seq1.mrna1;geneID=comp152432_c0_seq1.path1;Name=comp152432_c0_seq1;Dir=antisensecoverage=99.9;identity=100.0;matches=1046;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021426
Chr2	stalkie_big_nohaplotig	exon	126631760	126631898	100	+	.	Parent=comp152432_c0_seq1.mrna1;Target=comp152432_c0_seq1 908 1046 -
Chr2	stalkie_big_nohaplotig	exon	126631973	126632260	100	+	.	Parent=comp152432_c0_seq1.mrna1;Target=comp152432_c0_seq1 620 907 -
Chr2	stalkie_big_nohaplotig	exon	126632324	126632347	100	+	.	Parent=comp152432_c0_seq1.mrna1;Target=comp152432_c0_seq1 596 619 -
Chr2	stalkie_big_nohaplotig	exon	126633547	126633729	100	+	.	Parent=comp152432_c0_seq1.mrna1;Target=comp152432_c0_seq1 413 595 -
Chr2	stalkie_big_nohaplotig	exon	126633800	126634211	100	+	.	Parent=comp152432_c0_seq1.mrna1;Target=comp152432_c0_seq1 1 412 -
Chr2	stalkie_big_nohaplotig	CDS	126631877	126631898	.	+	0	Parent=comp152432_c0_seq1.mrna1;Target=comp152432_c0_seq1 908 929 .
Chr2	stalkie_big_nohaplotig	CDS	126631973	126632260	.	+	2	Parent=comp152432_c0_seq1.mrna1;Target=comp152432_c0_seq1 620 907 .
Chr2	stalkie_big_nohaplotig	CDS	126632324	126632347	.	+	2	Parent=comp152432_c0_seq1.mrna1;Target=comp152432_c0_seq1 596 619 .
Chr2	stalkie_big_nohaplotig	CDS	126633547	126633608	.	+	2	Parent=comp152432_c0_seq1.mrna1;Target=comp152432_c0_seq1 534 595 .
Chr2	gffcl	locus	126686408	126687264	.	+	.	ID=RLOC_00021427;geneIDs=FBgn0036239.1.path1;transcripts=FBgn0036239.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126686408	126687264	.	+	.	ID=FBgn0036239.1.mrna1;geneID=FBgn0036239.1.path1;Name=FBgn0036239.1;Dir=indeterminatecoverage=81.2;identity=100.0;matches=857;mismatches=0;indels=0;unknowns=0;Target=FBgn0036239.1 1056 200 .;CDS_Target=FBgn0036239.1 1056 202 .;locus=RLOC_00021427
Chr2	stalkie_big_nohaplotig	exon	126686408	126687264	100	+	.	Parent=FBgn0036239.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126686410	126687264	.	+	0	Parent=FBgn0036239.1.mrna1
Chr2	gffcl	locus	126726137	126727114	.	-	.	ID=RLOC_00021428;geneIDs=ORF1861.path1;transcripts=ORF1861.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126726137	126727114	.	-	.	ID=ORF1861.mrna1;geneID=ORF1861.path1;Name=ORF1861;Dir=indeterminatecoverage=100.0;identity=100.0;matches=978;mismatches=0;indels=0;unknowns=0;Target=ORF1861 978 1 .;locus=RLOC_00021428
Chr2	stalkie_big_nohaplotig	exon	126726137	126727114	100	-	.	Parent=ORF1861.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126726137	126727114	.	-	0	Parent=ORF1861.mrna1
Chr2	gffcl	locus	126733380	126734273	.	-	.	ID=RLOC_00021429;geneIDs=ORF2228.path1;transcripts=ORF2228.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126733380	126734273	.	-	.	ID=ORF2228.mrna1;geneID=ORF2228.path1;Name=ORF2228;Dir=indeterminatecoverage=100.0;identity=100.0;matches=894;mismatches=0;indels=0;unknowns=0;Target=ORF2228 894 1 .;locus=RLOC_00021429
Chr2	stalkie_big_nohaplotig	exon	126733380	126734273	100	-	.	Parent=ORF2228.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126733380	126734273	.	-	0	Parent=ORF2228.mrna1
Chr2	gffcl	locus	126758735	126759195	.	-	.	ID=RLOC_00021430;geneIDs=comp106928_c0_seq1.path1;transcripts=comp106928_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126758735	126759195	.	-	.	ID=comp106928_c0_seq1.mrna1;geneID=comp106928_c0_seq1.path1;Name=comp106928_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=460;mismatches=1;indels=0;unknowns=0;Target=comp106928_c0_seq1 461 1 .;CDS_Target=comp106928_c0_seq1 416 291 .;locus=RLOC_00021430
Chr2	stalkie_big_nohaplotig	exon	126758735	126759195	99	-	.	Parent=comp106928_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126758780	126758905	.	-	0	Parent=comp106928_c0_seq1.mrna1
Chr2	gffcl	locus	126770724	126772917	.	+	.	ID=RLOC_00021431;geneIDs=comp154897_c0_seq1.path2;transcripts=comp154897_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	126770724	126772917	.	+	.	ID=comp154897_c0_seq1.mrna2;geneID=comp154897_c0_seq1.path2;Name=comp154897_c0_seq1;Dir=antisensecoverage=69.6;identity=98.6;matches=564;mismatches=5;indels=3;unknowns=0;Target=comp154897_c0_seq1 249 253 .;locus=RLOC_00021431
Chr2	stalkie_big_nohaplotig	exon	126770724	126770746	100	+	.	Parent=comp154897_c0_seq1.mrna2;Target=comp154897_c0_seq1 795 817 -
Chr2	stalkie_big_nohaplotig	exon	126772369	126772917	98	+	.	Parent=comp154897_c0_seq1.mrna2;Target=comp154897_c0_seq1 249 794 -
Chr2	stalkie_big_nohaplotig	CDS	126772913	126772917	.	+	2	Parent=comp154897_c0_seq1.mrna2
Chr2	gffcl	locus	126770785	126771158	.	+	.	ID=RLOC_00021432;geneIDs=comp159491_c1_seq1.path1;transcripts=comp159491_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126770785	126771158	.	+	.	ID=comp159491_c1_seq1.mrna1;geneID=comp159491_c1_seq1.path1;Name=comp159491_c1_seq1;Dir=indeterminatecoverage=93.1;identity=88.9;matches=337;mismatches=37;indels=5;unknowns=0;Target=comp159491_c1_seq1 379 1 .;CDS_Target=comp159491_c1_seq1 8 3 .;locus=RLOC_00021432
Chr2	stalkie_big_nohaplotig	exon	126770785	126771158	88	+	.	Parent=comp159491_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126770787	126770792	.	+	0	Parent=comp159491_c1_seq1.mrna1
Chr2	gffcl	locus	126778438	126780096	.	+	.	ID=RLOC_00021433;geneIDs=comp157588_c2_seq1.path1;transcripts=comp157588_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126778438	126780096	.	+	.	ID=comp157588_c2_seq1.mrna1;geneID=comp157588_c2_seq1.path1;Name=comp157588_c2_seq1;Dir=sensecoverage=100.0;identity=98.8;matches=1512;mismatches=14;indels=5;unknowns=0;locus=RLOC_00021433
Chr2	stalkie_big_nohaplotig	exon	126778438	126778716	99	+	.	Parent=comp157588_c2_seq1.mrna1;Target=comp157588_c2_seq1 1 280 +
Chr2	stalkie_big_nohaplotig	exon	126778785	126778963	100	+	.	Parent=comp157588_c2_seq1.mrna1;Target=comp157588_c2_seq1 281 459 +
Chr2	stalkie_big_nohaplotig	exon	126779029	126780096	98	+	.	Parent=comp157588_c2_seq1.mrna1;Target=comp157588_c2_seq1 460 1531 +
Chr2	stalkie_big_nohaplotig	CDS	126778656	126778716	.	+	0	Parent=comp157588_c2_seq1.mrna1;Target=comp157588_c2_seq1 220 280 +
Chr2	stalkie_big_nohaplotig	CDS	126778785	126778963	.	+	2	Parent=comp157588_c2_seq1.mrna1;Target=comp157588_c2_seq1 281 459 +
Chr2	stalkie_big_nohaplotig	CDS	126779029	126779217	.	+	0	Parent=comp157588_c2_seq1.mrna1;Target=comp157588_c2_seq1 460 648 +
Chr2	gffcl	locus	126783474	126784803	.	-	.	ID=RLOC_00021434;geneIDs=FBgn0038917.1.path1;transcripts=FBgn0038917.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126783474	126784803	.	-	.	ID=FBgn0038917.1.mrna1;geneID=FBgn0038917.1.path1;Name=FBgn0038917.1;Dir=sensecoverage=99.9;identity=100.0;matches=1136;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021434
Chr2	stalkie_big_nohaplotig	exon	126783474	126783925	100	-	.	Parent=FBgn0038917.1.mrna1;Target=FBgn0038917.1 685 1136 +
Chr2	stalkie_big_nohaplotig	exon	126783988	126784063	100	-	.	Parent=FBgn0038917.1.mrna1;Target=FBgn0038917.1 609 684 +
Chr2	stalkie_big_nohaplotig	exon	126784130	126784646	100	-	.	Parent=FBgn0038917.1.mrna1;Target=FBgn0038917.1 92 608 +
Chr2	stalkie_big_nohaplotig	exon	126784713	126784803	100	-	.	Parent=FBgn0038917.1.mrna1;Target=FBgn0038917.1 1 91 +
Chr2	stalkie_big_nohaplotig	CDS	126783476	126783925	.	-	0	Parent=FBgn0038917.1.mrna1;Target=FBgn0038917.1 685 1134 +
Chr2	stalkie_big_nohaplotig	CDS	126783988	126784063	.	-	1	Parent=FBgn0038917.1.mrna1;Target=FBgn0038917.1 609 684 +
Chr2	stalkie_big_nohaplotig	CDS	126784130	126784646	.	-	2	Parent=FBgn0038917.1.mrna1;Target=FBgn0038917.1 92 608 +
Chr2	stalkie_big_nohaplotig	CDS	126784713	126784803	.	-	0	Parent=FBgn0038917.1.mrna1;Target=FBgn0038917.1 1 91 +
Chr2	gffcl	locus	126787461	126788234	.	+	.	ID=RLOC_00021435;geneIDs=FBgn0038916.1.path1;transcripts=FBgn0038916.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126787461	126788234	.	+	.	ID=FBgn0038916.1.mrna1;geneID=FBgn0038916.1.path1;Name=FBgn0038916.1;Dir=sensecoverage=99.6;identity=99.8;matches=537;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021435
Chr2	stalkie_big_nohaplotig	exon	126787461	126787593	99	+	.	Parent=FBgn0038916.1.mrna1;Target=FBgn0038916.1 3 135 +
Chr2	stalkie_big_nohaplotig	exon	126787659	126787790	100	+	.	Parent=FBgn0038916.1.mrna1;Target=FBgn0038916.1 136 267 +
Chr2	stalkie_big_nohaplotig	exon	126787890	126788126	100	+	.	Parent=FBgn0038916.1.mrna1;Target=FBgn0038916.1 268 504 +
Chr2	stalkie_big_nohaplotig	exon	126788199	126788234	100	+	.	Parent=FBgn0038916.1.mrna1;Target=FBgn0038916.1 505 540 +
Chr2	stalkie_big_nohaplotig	CDS	126787462	126787593	.	+	0	Parent=FBgn0038916.1.mrna1;Target=FBgn0038916.1 4 135 +
Chr2	stalkie_big_nohaplotig	CDS	126787659	126787790	.	+	0	Parent=FBgn0038916.1.mrna1;Target=FBgn0038916.1 136 267 +
Chr2	stalkie_big_nohaplotig	CDS	126787890	126788126	.	+	0	Parent=FBgn0038916.1.mrna1;Target=FBgn0038916.1 268 504 +
Chr2	stalkie_big_nohaplotig	CDS	126788199	126788234	.	+	0	Parent=FBgn0038916.1.mrna1;Target=FBgn0038916.1 505 540 +
Chr2	gffcl	locus	126790819	126799743	.	-	.	ID=RLOC_00021436;geneIDs=FBgn0037664.1.path1;transcripts=FBgn0037664.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126790819	126799743	.	-	.	ID=FBgn0037664.1.mrna1;geneID=FBgn0037664.1.path1;Name=FBgn0037664.1;Dir=sensecoverage=100.0;identity=99.9;matches=1226;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021436
Chr2	stalkie_big_nohaplotig	exon	126790819	126790896	100	-	.	Parent=FBgn0037664.1.mrna1;Target=FBgn0037664.1 1150 1227 +
Chr2	stalkie_big_nohaplotig	exon	126791080	126791340	100	-	.	Parent=FBgn0037664.1.mrna1;Target=FBgn0037664.1 889 1149 +
Chr2	stalkie_big_nohaplotig	exon	126791590	126791869	100	-	.	Parent=FBgn0037664.1.mrna1;Target=FBgn0037664.1 609 888 +
Chr2	stalkie_big_nohaplotig	exon	126799069	126799217	100	-	.	Parent=FBgn0037664.1.mrna1;Target=FBgn0037664.1 460 608 +
Chr2	stalkie_big_nohaplotig	exon	126799285	126799743	99	-	.	Parent=FBgn0037664.1.mrna1;Target=FBgn0037664.1 1 459 +
Chr2	stalkie_big_nohaplotig	CDS	126790819	126790896	.	-	0	Parent=FBgn0037664.1.mrna1;Target=FBgn0037664.1 1150 1227 +
Chr2	stalkie_big_nohaplotig	CDS	126791080	126791340	.	-	0	Parent=FBgn0037664.1.mrna1;Target=FBgn0037664.1 889 1149 +
Chr2	stalkie_big_nohaplotig	CDS	126791590	126791869	.	-	1	Parent=FBgn0037664.1.mrna1;Target=FBgn0037664.1 609 888 +
Chr2	stalkie_big_nohaplotig	CDS	126799069	126799217	.	-	0	Parent=FBgn0037664.1.mrna1;Target=FBgn0037664.1 460 608 +
Chr2	stalkie_big_nohaplotig	CDS	126799285	126799743	.	-	0	Parent=FBgn0037664.1.mrna1;Target=FBgn0037664.1 1 459 +
Chr2	gffcl	locus	126808174	126809160	.	+	.	ID=RLOC_00021437;geneIDs=FBgn0019972.1.path1;transcripts=FBgn0019972.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126808174	126809160	.	+	.	ID=FBgn0019972.1.mrna1;geneID=FBgn0019972.1.path1;Name=FBgn0019972.1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=980;mismatches=7;indels=0;unknowns=0;Target=FBgn0019972.1 987 1 .;locus=RLOC_00021437
Chr2	stalkie_big_nohaplotig	exon	126808174	126809160	99	+	.	Parent=FBgn0019972.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126808174	126809160	.	+	0	Parent=FBgn0019972.1.mrna1
Chr2	gffcl	locus	126811698	126812305	.	-	.	ID=RLOC_00021438;geneIDs=FBgn0039697.1.path1;transcripts=FBgn0039697.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126811698	126812305	.	-	.	ID=FBgn0039697.1.mrna1;geneID=FBgn0039697.1.path1;Name=FBgn0039697.1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=603;mismatches=5;indels=1;unknowns=0;Target=FBgn0039697.1 609 1 .;CDS_Target=FBgn0039697.1 125 3 .;locus=RLOC_00021438
Chr2	stalkie_big_nohaplotig	exon	126811698	126812305	99	-	.	Parent=FBgn0039697.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126812182	126812303	.	-	0	Parent=FBgn0039697.1.mrna1
Chr2	gffcl	locus	126812878	126814581	.	+	.	ID=RLOC_00021439;geneIDs=FBgn0039698.1.path1;transcripts=FBgn0039698.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126812878	126814581	.	+	.	ID=FBgn0039698.1.mrna1;geneID=FBgn0039698.1.path1;Name=FBgn0039698.1;Dir=sensecoverage=100.0;identity=99.1;matches=1055;mismatches=10;indels=0;unknowns=0;locus=RLOC_00021439
Chr2	stalkie_big_nohaplotig	exon	126812878	126813144	99	+	.	Parent=FBgn0039698.1.mrna1;Target=FBgn0039698.1 1 267 +
Chr2	stalkie_big_nohaplotig	exon	126813210	126813468	99	+	.	Parent=FBgn0039698.1.mrna1;Target=FBgn0039698.1 268 526 +
Chr2	stalkie_big_nohaplotig	exon	126813529	126813736	98	+	.	Parent=FBgn0039698.1.mrna1;Target=FBgn0039698.1 527 734 +
Chr2	stalkie_big_nohaplotig	exon	126813933	126814057	99	+	.	Parent=FBgn0039698.1.mrna1;Target=FBgn0039698.1 735 859 +
Chr2	stalkie_big_nohaplotig	exon	126814376	126814581	98	+	.	Parent=FBgn0039698.1.mrna1;Target=FBgn0039698.1 860 1065 +
Chr2	stalkie_big_nohaplotig	CDS	126812878	126813144	.	+	0	Parent=FBgn0039698.1.mrna1;Target=FBgn0039698.1 1 267 +
Chr2	stalkie_big_nohaplotig	CDS	126813210	126813468	.	+	0	Parent=FBgn0039698.1.mrna1;Target=FBgn0039698.1 268 526 +
Chr2	stalkie_big_nohaplotig	CDS	126813529	126813736	.	+	2	Parent=FBgn0039698.1.mrna1;Target=FBgn0039698.1 527 734 +
Chr2	stalkie_big_nohaplotig	CDS	126813933	126814057	.	+	1	Parent=FBgn0039698.1.mrna1;Target=FBgn0039698.1 735 859 +
Chr2	stalkie_big_nohaplotig	CDS	126814376	126814581	.	+	2	Parent=FBgn0039698.1.mrna1;Target=FBgn0039698.1 860 1065 +
Chr2	gffcl	locus	126814920	126817222	.	-	.	ID=RLOC_00021440;geneIDs=FBgn0002924.1.path1;transcripts=FBgn0002924.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126814920	126817222	.	-	.	ID=FBgn0002924.1.mrna1;geneID=FBgn0002924.1.path1;Name=FBgn0002924.1;Dir=sensecoverage=100.0;identity=99.8;matches=2113;mismatches=5;indels=0;unknowns=0;locus=RLOC_00021440
Chr2	stalkie_big_nohaplotig	exon	126814920	126816137	100	-	.	Parent=FBgn0002924.1.mrna1;Target=FBgn0002924.1 901 2118 +
Chr2	stalkie_big_nohaplotig	exon	126816266	126816969	99	-	.	Parent=FBgn0002924.1.mrna1;Target=FBgn0002924.1 197 900 +
Chr2	stalkie_big_nohaplotig	exon	126817027	126817222	98	-	.	Parent=FBgn0002924.1.mrna1;Target=FBgn0002924.1 1 196 +
Chr2	stalkie_big_nohaplotig	CDS	126814920	126816137	.	-	0	Parent=FBgn0002924.1.mrna1;Target=FBgn0002924.1 901 2118 +
Chr2	stalkie_big_nohaplotig	CDS	126816266	126816969	.	-	2	Parent=FBgn0002924.1.mrna1;Target=FBgn0002924.1 197 900 +
Chr2	stalkie_big_nohaplotig	CDS	126817027	126817222	.	-	0	Parent=FBgn0002924.1.mrna1;Target=FBgn0002924.1 1 196 +
Chr2	gffcl	locus	126820139	126822561	.	+	.	ID=RLOC_00021441;geneIDs=FBgn0037554.1.path1;transcripts=FBgn0037554.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126820139	126822561	.	+	.	ID=FBgn0037554.1.mrna1;geneID=FBgn0037554.1.path1;Name=FBgn0037554.1;Dir=sensecoverage=100.0;identity=98.8;matches=2329;mismatches=23;indels=6;unknowns=0;locus=RLOC_00021441
Chr2	stalkie_big_nohaplotig	exon	126820139	126821137	98	+	.	Parent=FBgn0037554.1.mrna1;Target=FBgn0037554.1 1 999 +
Chr2	stalkie_big_nohaplotig	exon	126821203	126822561	98	+	.	Parent=FBgn0037554.1.mrna1;Target=FBgn0037554.1 1000 2352 +
Chr2	stalkie_big_nohaplotig	CDS	126820139	126821137	.	+	0	Parent=FBgn0037554.1.mrna1;Target=FBgn0037554.1 1 999 +
Chr2	stalkie_big_nohaplotig	CDS	126821203	126822561	.	+	0	Parent=FBgn0037554.1.mrna1;Target=FBgn0037554.1 1000 2352 +
Chr2	gffcl	locus	126823015	126824035	.	-	.	ID=RLOC_00021442;geneIDs=comp143399_c0_seq1.path1;transcripts=comp143399_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126823015	126824035	.	-	.	ID=comp143399_c0_seq1.mrna1;geneID=comp143399_c0_seq1.path1;Name=comp143399_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.3;matches=1014;mismatches=7;indels=0;unknowns=0;Target=comp143399_c0_seq1 1021 1 .;CDS_Target=comp143399_c0_seq1 285 157 .;locus=RLOC_00021442
Chr2	stalkie_big_nohaplotig	exon	126823015	126824035	99	-	.	Parent=comp143399_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126823751	126823879	.	-	0	Parent=comp143399_c0_seq1.mrna1
Chr2	gffcl	locus	126827152	126830337	.	-	.	ID=RLOC_00021443;geneIDs=FBgn0037555.1.path1,comp113158_c0_seq1.path1;transcripts=FBgn0037555.1.mrna1,comp113158_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126827152	126830337	.	-	.	ID=FBgn0037555.1.mrna1;geneID=FBgn0037555.1.path1;Name=FBgn0037555.1;Dir=sensecoverage=100.0;identity=99.8;matches=1320;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021443
Chr2	stalkie_big_nohaplotig	exon	126827152	126827262	100	-	.	Parent=FBgn0037555.1.mrna1;Target=FBgn0037555.1 1213 1323 +
Chr2	stalkie_big_nohaplotig	exon	126827345	126827506	100	-	.	Parent=FBgn0037555.1.mrna1;Target=FBgn0037555.1 1051 1212 +
Chr2	stalkie_big_nohaplotig	exon	126828335	126829207	99	-	.	Parent=FBgn0037555.1.mrna1;Target=FBgn0037555.1 178 1050 +
Chr2	stalkie_big_nohaplotig	exon	126830081	126830178	100	-	.	Parent=FBgn0037555.1.mrna1;Target=FBgn0037555.1 80 177 +
Chr2	stalkie_big_nohaplotig	exon	126830259	126830337	98	-	.	Parent=FBgn0037555.1.mrna1;Target=FBgn0037555.1 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	126827152	126827262	.	-	0	Parent=FBgn0037555.1.mrna1;Target=FBgn0037555.1 1213 1323 +
Chr2	stalkie_big_nohaplotig	CDS	126827345	126827506	.	-	0	Parent=FBgn0037555.1.mrna1;Target=FBgn0037555.1 1051 1212 +
Chr2	stalkie_big_nohaplotig	CDS	126828335	126829207	.	-	0	Parent=FBgn0037555.1.mrna1;Target=FBgn0037555.1 178 1050 +
Chr2	stalkie_big_nohaplotig	CDS	126830081	126830178	.	-	2	Parent=FBgn0037555.1.mrna1;Target=FBgn0037555.1 80 177 +
Chr2	stalkie_big_nohaplotig	CDS	126830259	126830337	.	-	0	Parent=FBgn0037555.1.mrna1;Target=FBgn0037555.1 1 79 +
Chr2	stalkie_big_nohaplotig	mRNA	126827929	126828357	.	-	.	ID=comp113158_c0_seq1.mrna1;geneID=comp113158_c0_seq1.path1;Name=comp113158_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=423;mismatches=0;indels=12;unknowns=0;Target=comp113158_c0_seq1 429 1 .;CDS_Target=comp113158_c0_seq1 202 140 .;locus=RLOC_00021443
Chr2	stalkie_big_nohaplotig	exon	126827929	126828357	97	-	.	Parent=comp113158_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126828156	126828218	.	-	0	Parent=comp113158_c0_seq1.mrna1
Chr2	gffcl	locus	126847007	126857583	.	+	.	ID=RLOC_00021445;geneIDs=FBgn0004666.1.path1;transcripts=FBgn0004666.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126847007	126857583	.	+	.	ID=FBgn0004666.1.mrna1;geneID=FBgn0004666.1.path1;Name=FBgn0004666.1;Dir=sensecoverage=99.1;identity=99.4;matches=2116;mismatches=13;indels=0;unknowns=0;locus=RLOC_00021445
Chr2	stalkie_big_nohaplotig	exon	126847007	126847201	99	+	.	Parent=FBgn0004666.1.mrna1;Target=FBgn0004666.1 20 214 +
Chr2	stalkie_big_nohaplotig	exon	126850856	126851028	100	+	.	Parent=FBgn0004666.1.mrna1;Target=FBgn0004666.1 215 387 +
Chr2	stalkie_big_nohaplotig	exon	126851355	126851456	100	+	.	Parent=FBgn0004666.1.mrna1;Target=FBgn0004666.1 388 489 +
Chr2	stalkie_big_nohaplotig	exon	126851662	126851850	100	+	.	Parent=FBgn0004666.1.mrna1;Target=FBgn0004666.1 490 678 +
Chr2	stalkie_big_nohaplotig	exon	126851911	126852110	99	+	.	Parent=FBgn0004666.1.mrna1;Target=FBgn0004666.1 679 878 +
Chr2	stalkie_big_nohaplotig	exon	126854330	126854436	100	+	.	Parent=FBgn0004666.1.mrna1;Target=FBgn0004666.1 879 985 +
Chr2	stalkie_big_nohaplotig	exon	126854554	126854701	100	+	.	Parent=FBgn0004666.1.mrna1;Target=FBgn0004666.1 986 1133 +
Chr2	stalkie_big_nohaplotig	exon	126856569	126857583	98	+	.	Parent=FBgn0004666.1.mrna1;Target=FBgn0004666.1 1134 2148 +
Chr2	stalkie_big_nohaplotig	CDS	126847009	126847201	.	+	0	Parent=FBgn0004666.1.mrna1;Target=FBgn0004666.1 22 214 +
Chr2	stalkie_big_nohaplotig	CDS	126850856	126851028	.	+	2	Parent=FBgn0004666.1.mrna1;Target=FBgn0004666.1 215 387 +
Chr2	stalkie_big_nohaplotig	CDS	126851355	126851456	.	+	0	Parent=FBgn0004666.1.mrna1;Target=FBgn0004666.1 388 489 +
Chr2	stalkie_big_nohaplotig	CDS	126851662	126851850	.	+	0	Parent=FBgn0004666.1.mrna1;Target=FBgn0004666.1 490 678 +
Chr2	stalkie_big_nohaplotig	CDS	126851911	126852110	.	+	0	Parent=FBgn0004666.1.mrna1;Target=FBgn0004666.1 679 878 +
Chr2	stalkie_big_nohaplotig	CDS	126854330	126854436	.	+	1	Parent=FBgn0004666.1.mrna1;Target=FBgn0004666.1 879 985 +
Chr2	stalkie_big_nohaplotig	CDS	126854554	126854701	.	+	2	Parent=FBgn0004666.1.mrna1;Target=FBgn0004666.1 986 1133 +
Chr2	stalkie_big_nohaplotig	CDS	126856569	126857583	.	+	1	Parent=FBgn0004666.1.mrna1;Target=FBgn0004666.1 1134 2148 +
Chr2	gffcl	locus	126867349	126867961	.	+	.	ID=RLOC_00021447;geneIDs=comp1161391_c0_seq1.path1;transcripts=comp1161391_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126867349	126867961	.	+	.	ID=comp1161391_c0_seq1.mrna1;geneID=comp1161391_c0_seq1.path1;Name=comp1161391_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=608;mismatches=5;indels=0;unknowns=0;Target=comp1161391_c0_seq1 613 1 .;CDS_Target=comp1161391_c0_seq1 72 1 .;locus=RLOC_00021447
Chr2	stalkie_big_nohaplotig	exon	126867349	126867961	99	+	.	Parent=comp1161391_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126867349	126867420	.	+	0	Parent=comp1161391_c0_seq1.mrna1
Chr2	gffcl	locus	126868063	126868795	.	+	.	ID=RLOC_00021448;geneIDs=comp80044_c0_seq1.path1;transcripts=comp80044_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126868063	126868795	.	+	.	ID=comp80044_c0_seq1.mrna1;geneID=comp80044_c0_seq1.path1;Name=comp80044_c0_seq1;Dir=indeterminatecoverage=97.0;identity=87.0;matches=655;mismatches=26;indels=72;unknowns=0;Target=comp80044_c0_seq1 701 1 .;CDS_Target=comp80044_c0_seq1 186 1 .;locus=RLOC_00021448
Chr2	stalkie_big_nohaplotig	exon	126868063	126868795	86	+	.	Parent=comp80044_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126868063	126868248	.	+	0	Parent=comp80044_c0_seq1.mrna1
Chr2	gffcl	locus	126872608	126873383	.	.	.	ID=RLOC_00021449;geneIDs=FBgn0038834.1.path1,comp148613_c0_seq1.path1;transcripts=FBgn0038834.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126872859	126873383	.	+	.	ID=FBgn0038834.1.mrna1;geneID=FBgn0038834.1.path1;Name=FBgn0038834.1;Dir=sensecoverage=100.0;identity=99.3;matches=399;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021449
Chr2	stalkie_big_nohaplotig	exon	126872859	126872942	100	+	.	Parent=FBgn0038834.1.mrna1;Target=FBgn0038834.1 1 84 +
Chr2	stalkie_big_nohaplotig	exon	126873066	126873383	99	+	.	Parent=FBgn0038834.1.mrna1;Target=FBgn0038834.1 85 402 +
Chr2	stalkie_big_nohaplotig	CDS	126872859	126872942	.	+	0	Parent=FBgn0038834.1.mrna1;Target=FBgn0038834.1 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	126873066	126873383	.	+	0	Parent=FBgn0038834.1.mrna1;Target=FBgn0038834.1 85 402 +
Chr2	gffcl	locus	126873596	126874580	.	+	.	ID=RLOC_00021450;geneIDs=comp142818_c0_seq1.path1;transcripts=comp142818_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126873596	126874580	.	+	.	ID=comp142818_c0_seq1.mrna1;geneID=comp142818_c0_seq1.path1;Name=comp142818_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.5;matches=981;mismatches=4;indels=1;unknowns=0;Target=comp142818_c0_seq1 986 1 .;CDS_Target=comp142818_c0_seq1 358 230 .;locus=RLOC_00021450
Chr2	stalkie_big_nohaplotig	exon	126873596	126874580	99	+	.	Parent=comp142818_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126873824	126873952	.	+	0	Parent=comp142818_c0_seq1.mrna1
Chr2	gffcl	locus	126878321	126879271	.	-	.	ID=RLOC_00021451;geneIDs=FBgn0036239.2.path1;transcripts=FBgn0036239.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126878321	126879271	.	-	.	ID=FBgn0036239.2.mrna1;geneID=FBgn0036239.2.path1;Name=FBgn0036239.2;Dir=indeterminatecoverage=100.0;identity=99.1;matches=942;mismatches=9;indels=0;unknowns=0;Target=FBgn0036239.2 951 1 .;locus=RLOC_00021451
Chr2	stalkie_big_nohaplotig	exon	126878321	126879271	99	-	.	Parent=FBgn0036239.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126878321	126879271	.	-	0	Parent=FBgn0036239.2.mrna1
Chr2	gffcl	locus	126890987	126891230	.	+	.	ID=RLOC_00021453;geneIDs=comp140461_c0_seq1.path1;transcripts=comp140461_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126890987	126891230	.	+	.	ID=comp140461_c0_seq1.mrna1;geneID=comp140461_c0_seq1.path1;Name=comp140461_c0_seq1;Dir=indeterminatecoverage=84.5;identity=84.0;matches=205;mismatches=7;indels=32;unknowns=0;Target=comp140461_c0_seq1 231 20 .;CDS_Target=comp140461_c0_seq1 213 166 .;locus=RLOC_00021453
Chr2	stalkie_big_nohaplotig	exon	126890987	126891230	84	+	.	Parent=comp140461_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126891133	126891212	.	+	0	Parent=comp140461_c0_seq1.mrna1
Chr2	gffcl	locus	126893661	126893988	.	+	.	ID=RLOC_00021454;geneIDs=comp119103_c0_seq1.path1;transcripts=comp119103_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126893661	126893988	.	+	.	ID=comp119103_c0_seq1.mrna1;geneID=comp119103_c0_seq1.path1;Name=comp119103_c0_seq1;Dir=indeterminatecoverage=90.4;identity=93.6;matches=307;mismatches=14;indels=7;unknowns=0;Target=comp119103_c0_seq1 321 1 .;CDS_Target=comp119103_c0_seq1 161 3 .;locus=RLOC_00021454
Chr2	stalkie_big_nohaplotig	exon	126893661	126893988	93	+	.	Parent=comp119103_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126893663	126893828	.	+	0	Parent=comp119103_c0_seq1.mrna1
Chr2	gffcl	locus	126897331	126907908	.	-	.	ID=RLOC_00021455;geneIDs=FBgn0038837.1.path1;transcripts=FBgn0038837.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126897331	126907908	.	-	.	ID=FBgn0038837.1.mrna1;geneID=FBgn0038837.1.path1;Name=FBgn0038837.1;Dir=sensecoverage=100.0;identity=99.8;matches=2575;mismatches=5;indels=0;unknowns=0;locus=RLOC_00021455
Chr2	stalkie_big_nohaplotig	exon	126897331	126897623	99	-	.	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 2288 2580 +
Chr2	stalkie_big_nohaplotig	exon	126897693	126897812	100	-	.	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 2168 2287 +
Chr2	stalkie_big_nohaplotig	exon	126897922	126898033	100	-	.	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 2056 2167 +
Chr2	stalkie_big_nohaplotig	exon	126898093	126898291	99	-	.	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 1857 2055 +
Chr2	stalkie_big_nohaplotig	exon	126898360	126898491	100	-	.	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 1725 1856 +
Chr2	stalkie_big_nohaplotig	exon	126898555	126898815	99	-	.	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 1464 1724 +
Chr2	stalkie_big_nohaplotig	exon	126898873	126899042	99	-	.	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 1294 1463 +
Chr2	stalkie_big_nohaplotig	exon	126901710	126902385	100	-	.	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 618 1293 +
Chr2	stalkie_big_nohaplotig	exon	126902455	126902612	100	-	.	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 460 617 +
Chr2	stalkie_big_nohaplotig	exon	126902689	126902778	100	-	.	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 370 459 +
Chr2	stalkie_big_nohaplotig	exon	126902863	126902957	100	-	.	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 275 369 +
Chr2	stalkie_big_nohaplotig	exon	126907344	126907499	100	-	.	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 119 274 +
Chr2	stalkie_big_nohaplotig	exon	126907791	126907908	100	-	.	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 1 118 +
Chr2	stalkie_big_nohaplotig	CDS	126897331	126897623	.	-	2	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 2288 2580 +
Chr2	stalkie_big_nohaplotig	CDS	126897693	126897812	.	-	2	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 2168 2287 +
Chr2	stalkie_big_nohaplotig	CDS	126897922	126898033	.	-	0	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 2056 2167 +
Chr2	stalkie_big_nohaplotig	CDS	126898093	126898291	.	-	1	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 1857 2055 +
Chr2	stalkie_big_nohaplotig	CDS	126898360	126898491	.	-	1	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 1725 1856 +
Chr2	stalkie_big_nohaplotig	CDS	126898555	126898815	.	-	1	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 1464 1724 +
Chr2	stalkie_big_nohaplotig	CDS	126898873	126899042	.	-	0	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 1294 1463 +
Chr2	stalkie_big_nohaplotig	CDS	126901710	126902385	.	-	1	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 618 1293 +
Chr2	stalkie_big_nohaplotig	CDS	126902455	126902612	.	-	0	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 460 617 +
Chr2	stalkie_big_nohaplotig	CDS	126902689	126902778	.	-	0	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 370 459 +
Chr2	stalkie_big_nohaplotig	CDS	126902863	126902957	.	-	2	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 275 369 +
Chr2	stalkie_big_nohaplotig	CDS	126907344	126907499	.	-	2	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 119 274 +
Chr2	stalkie_big_nohaplotig	CDS	126907791	126907908	.	-	0	Parent=FBgn0038837.1.mrna1;Target=FBgn0038837.1 1 118 +
Chr2	gffcl	locus	126924662	126925173	.	-	.	ID=RLOC_00021456;geneIDs=comp135203_c0_seq1.path1;transcripts=comp135203_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126924662	126925173	.	-	.	ID=comp135203_c0_seq1.mrna1;geneID=comp135203_c0_seq1.path1;Name=comp135203_c0_seq1;Dir=antisensecoverage=99.3;identity=100.0;matches=408;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021456
Chr2	stalkie_big_nohaplotig	exon	126924662	126925013	100	-	.	Parent=comp135203_c0_seq1.mrna1;Target=comp135203_c0_seq1 1 352 -
Chr2	stalkie_big_nohaplotig	exon	126925118	126925173	100	-	.	Parent=comp135203_c0_seq1.mrna1;Target=comp135203_c0_seq1 353 408 -
Chr2	stalkie_big_nohaplotig	CDS	126924831	126925013	.	-	0	Parent=comp135203_c0_seq1.mrna1;Target=comp135203_c0_seq1 170 352 .
Chr2	stalkie_big_nohaplotig	CDS	126925118	126925171	.	-	0	Parent=comp135203_c0_seq1.mrna1;Target=comp135203_c0_seq1 353 406 .
Chr2	gffcl	locus	126968477	126970765	.	+	.	ID=RLOC_00021457;geneIDs=ORF242.path1;transcripts=ORF242.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126968477	126970765	.	+	.	ID=ORF242.mrna1;geneID=ORF242.path1;Name=ORF242;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2287;mismatches=2;indels=0;unknowns=0;Target=ORF242 2289 1 .;locus=RLOC_00021457
Chr2	stalkie_big_nohaplotig	exon	126968477	126970765	99	+	.	Parent=ORF242.mrna1
Chr2	stalkie_big_nohaplotig	CDS	126968477	126970765	.	+	0	Parent=ORF242.mrna1
Chr2	gffcl	locus	126989826	126990911	.	+	.	ID=RLOC_00021458;geneIDs=FBgn0033502.1.path1;transcripts=FBgn0033502.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	126989826	126990911	.	+	.	ID=FBgn0033502.1.mrna1;geneID=FBgn0033502.1.path1;Name=FBgn0033502.1;Dir=sensecoverage=100.0;identity=99.7;matches=1029;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021458
Chr2	stalkie_big_nohaplotig	exon	126989826	126990034	99	+	.	Parent=FBgn0033502.1.mrna1;Target=FBgn0033502.1 1 209 +
Chr2	stalkie_big_nohaplotig	exon	126990089	126990911	99	+	.	Parent=FBgn0033502.1.mrna1;Target=FBgn0033502.1 210 1032 +
Chr2	stalkie_big_nohaplotig	CDS	126989826	126990034	.	+	0	Parent=FBgn0033502.1.mrna1;Target=FBgn0033502.1 1 209 +
Chr2	stalkie_big_nohaplotig	CDS	126990089	126990911	.	+	1	Parent=FBgn0033502.1.mrna1;Target=FBgn0033502.1 210 1032 +
Chr2	gffcl	locus	127002350	127002675	.	+	.	ID=RLOC_00021459;geneIDs=comp146565_c0_seq1.path2;transcripts=comp146565_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	127002350	127002675	.	+	.	ID=comp146565_c0_seq1.mrna2;geneID=comp146565_c0_seq1.path2;Name=comp146565_c0_seq1;Dir=indeterminatecoverage=93.1;identity=99.7;matches=325;mismatches=1;indels=0;unknowns=0;Target=comp146565_c0_seq1 326 1 .;CDS_Target=comp146565_c0_seq1 148 77 .;locus=RLOC_00021459
Chr2	stalkie_big_nohaplotig	exon	127002350	127002675	99	+	.	Parent=comp146565_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	127002426	127002497	.	+	0	Parent=comp146565_c0_seq1.mrna2
Chr2	gffcl	locus	127070788	127419015	.	.	.	ID=RLOC_00021460;geneIDs=FBgn0039249.1.path1,comp145050_c1_seq1.path1,comp160534_c0_seq1.path1;transcripts=comp160534_c0_seq1.mrna1,comp145050_c1_seq1.mrna1,FBgn0039249.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127070788	127419015	.	-	.	ID=comp160534_c0_seq1.mrna1;geneID=comp160534_c0_seq1.path1;Name=comp160534_c0_seq1;Dir=sensecoverage=42.2;identity=100.0;matches=1667;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021460
Chr2	stalkie_big_nohaplotig	exon	127070788	127070790	100	-	.	Parent=comp160534_c0_seq1.mrna1;Target=comp160534_c0_seq1 1947 1949 +
Chr2	stalkie_big_nohaplotig	exon	127078537	127078539	100	-	.	Parent=comp160534_c0_seq1.mrna1;Target=comp160534_c0_seq1 1944 1946 +
Chr2	stalkie_big_nohaplotig	exon	127093994	127093997	100	-	.	Parent=comp160534_c0_seq1.mrna1;Target=comp160534_c0_seq1 1940 1943 +
Chr2	stalkie_big_nohaplotig	exon	127094021	127094028	100	-	.	Parent=comp160534_c0_seq1.mrna1;Target=comp160534_c0_seq1 1913 1920 +
Chr2	stalkie_big_nohaplotig	exon	127096331	127096332	100	-	.	Parent=comp160534_c0_seq1.mrna1;Target=comp160534_c0_seq1 1911 1912 +
Chr2	stalkie_big_nohaplotig	exon	127112353	127112355	100	-	.	Parent=comp160534_c0_seq1.mrna1;Target=comp160534_c0_seq1 1908 1910 +
Chr2	stalkie_big_nohaplotig	exon	127115784	127115788	100	-	.	Parent=comp160534_c0_seq1.mrna1;Target=comp160534_c0_seq1 1903 1907 +
Chr2	stalkie_big_nohaplotig	exon	127123084	127123086	100	-	.	Parent=comp160534_c0_seq1.mrna1;Target=comp160534_c0_seq1 1900 1902 +
Chr2	stalkie_big_nohaplotig	exon	127123101	127123109	100	-	.	Parent=comp160534_c0_seq1.mrna1;Target=comp160534_c0_seq1 1884 1892 +
Chr2	stalkie_big_nohaplotig	exon	127128471	127128476	100	-	.	Parent=comp160534_c0_seq1.mrna1;Target=comp160534_c0_seq1 1878 1883 +
Chr2	stalkie_big_nohaplotig	exon	127138763	127138767	100	-	.	Parent=comp160534_c0_seq1.mrna1;Target=comp160534_c0_seq1 1873 1877 +
Chr2	stalkie_big_nohaplotig	exon	127416731	127417151	100	-	.	Parent=comp160534_c0_seq1.mrna1;Target=comp160534_c0_seq1 1452 1872 +
Chr2	stalkie_big_nohaplotig	exon	127417225	127417753	100	-	.	Parent=comp160534_c0_seq1.mrna1;Target=comp160534_c0_seq1 923 1451 +
Chr2	stalkie_big_nohaplotig	exon	127417810	127418047	100	-	.	Parent=comp160534_c0_seq1.mrna1;Target=comp160534_c0_seq1 685 922 +
Chr2	stalkie_big_nohaplotig	exon	127418114	127418249	100	-	.	Parent=comp160534_c0_seq1.mrna1;Target=comp160534_c0_seq1 549 684 +
Chr2	stalkie_big_nohaplotig	exon	127418725	127419015	100	-	.	Parent=comp160534_c0_seq1.mrna1;Target=comp160534_c0_seq1 258 548 +
Chr2	stalkie_big_nohaplotig	CDS	127416970	127417151	.	-	2	Parent=comp160534_c0_seq1.mrna1;Target=comp160534_c0_seq1 1452 1633 +
Chr2	stalkie_big_nohaplotig	CDS	127417225	127417753	.	-	0	Parent=comp160534_c0_seq1.mrna1;Target=comp160534_c0_seq1 923 1451 +
Chr2	stalkie_big_nohaplotig	CDS	127417810	127418047	.	-	1	Parent=comp160534_c0_seq1.mrna1;Target=comp160534_c0_seq1 685 922 +
Chr2	stalkie_big_nohaplotig	CDS	127418114	127418217	.	-	0	Parent=comp160534_c0_seq1.mrna1;Target=comp160534_c0_seq1 581 684 +
Chr2	stalkie_big_nohaplotig	mRNA	127093598	127094053	.	+	.	ID=comp145050_c1_seq1.mrna1;geneID=comp145050_c1_seq1.path1;Name=comp145050_c1_seq1;Dir=indeterminatecoverage=84.6;identity=100.0;matches=456;mismatches=0;indels=0;unknowns=0;Target=comp145050_c1_seq1 539 84 .;CDS_Target=comp145050_c1_seq1 301 224 .;locus=RLOC_00021460
Chr2	stalkie_big_nohaplotig	exon	127093598	127094053	100	+	.	Parent=comp145050_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127093738	127093815	.	+	0	Parent=comp145050_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127411255	127418244	.	-	.	ID=FBgn0039249.1.mrna1;geneID=FBgn0039249.1.path1;Name=FBgn0039249.1;Dir=sensecoverage=100.0;identity=100.0;matches=2643;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021460
Chr2	stalkie_big_nohaplotig	exon	127411255	127411386	100	-	.	Parent=FBgn0039249.1.mrna1;Target=FBgn0039249.1 2512 2643 +
Chr2	stalkie_big_nohaplotig	exon	127411453	127411584	100	-	.	Parent=FBgn0039249.1.mrna1;Target=FBgn0039249.1 2380 2511 +
Chr2	stalkie_big_nohaplotig	exon	127411650	127411880	100	-	.	Parent=FBgn0039249.1.mrna1;Target=FBgn0039249.1 2149 2379 +
Chr2	stalkie_big_nohaplotig	exon	127411942	127412372	100	-	.	Parent=FBgn0039249.1.mrna1;Target=FBgn0039249.1 1718 2148 +
Chr2	stalkie_big_nohaplotig	exon	127412448	127412719	100	-	.	Parent=FBgn0039249.1.mrna1;Target=FBgn0039249.1 1446 1717 +
Chr2	stalkie_big_nohaplotig	exon	127412780	127413026	100	-	.	Parent=FBgn0039249.1.mrna1;Target=FBgn0039249.1 1199 1445 +
Chr2	stalkie_big_nohaplotig	exon	127413086	127413207	100	-	.	Parent=FBgn0039249.1.mrna1;Target=FBgn0039249.1 1077 1198 +
Chr2	stalkie_big_nohaplotig	exon	127416974	127417151	100	-	.	Parent=FBgn0039249.1.mrna1;Target=FBgn0039249.1 899 1076 +
Chr2	stalkie_big_nohaplotig	exon	127417225	127417753	100	-	.	Parent=FBgn0039249.1.mrna1;Target=FBgn0039249.1 370 898 +
Chr2	stalkie_big_nohaplotig	exon	127417810	127418047	100	-	.	Parent=FBgn0039249.1.mrna1;Target=FBgn0039249.1 132 369 +
Chr2	stalkie_big_nohaplotig	exon	127418114	127418244	100	-	.	Parent=FBgn0039249.1.mrna1;Target=FBgn0039249.1 1 131 +
Chr2	stalkie_big_nohaplotig	CDS	127411255	127411386	.	-	0	Parent=FBgn0039249.1.mrna1;Target=FBgn0039249.1 2512 2643 +
Chr2	stalkie_big_nohaplotig	CDS	127411453	127411584	.	-	0	Parent=FBgn0039249.1.mrna1;Target=FBgn0039249.1 2380 2511 +
Chr2	stalkie_big_nohaplotig	CDS	127411650	127411880	.	-	0	Parent=FBgn0039249.1.mrna1;Target=FBgn0039249.1 2149 2379 +
Chr2	stalkie_big_nohaplotig	CDS	127411942	127412372	.	-	2	Parent=FBgn0039249.1.mrna1;Target=FBgn0039249.1 1718 2148 +
Chr2	stalkie_big_nohaplotig	CDS	127412448	127412719	.	-	1	Parent=FBgn0039249.1.mrna1;Target=FBgn0039249.1 1446 1717 +
Chr2	stalkie_big_nohaplotig	CDS	127412780	127413026	.	-	2	Parent=FBgn0039249.1.mrna1;Target=FBgn0039249.1 1199 1445 +
Chr2	stalkie_big_nohaplotig	CDS	127413086	127413207	.	-	1	Parent=FBgn0039249.1.mrna1;Target=FBgn0039249.1 1077 1198 +
Chr2	stalkie_big_nohaplotig	CDS	127416974	127417151	.	-	2	Parent=FBgn0039249.1.mrna1;Target=FBgn0039249.1 899 1076 +
Chr2	stalkie_big_nohaplotig	CDS	127417225	127417753	.	-	0	Parent=FBgn0039249.1.mrna1;Target=FBgn0039249.1 370 898 +
Chr2	stalkie_big_nohaplotig	CDS	127417810	127418047	.	-	1	Parent=FBgn0039249.1.mrna1;Target=FBgn0039249.1 132 369 +
Chr2	stalkie_big_nohaplotig	CDS	127418114	127418244	.	-	0	Parent=FBgn0039249.1.mrna1;Target=FBgn0039249.1 1 131 +
Chr2	gffcl	locus	127091405	127091957	.	+	.	ID=RLOC_00021462;geneIDs=comp147636_c0_seq1.path1;transcripts=comp147636_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127091405	127091957	.	+	.	ID=comp147636_c0_seq1.mrna1;geneID=comp147636_c0_seq1.path1;Name=comp147636_c0_seq1;Dir=indeterminatecoverage=97.9;identity=98.0;matches=546;mismatches=6;indels=5;unknowns=0;Target=comp147636_c0_seq1 556 1 .;CDS_Target=comp147636_c0_seq1 303 199 .;locus=RLOC_00021462
Chr2	stalkie_big_nohaplotig	exon	127091405	127091957	98	+	.	Parent=comp147636_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127091603	127091703	.	+	0	Parent=comp147636_c0_seq1.mrna1
Chr2	gffcl	locus	127092244	127092585	.	+	.	ID=RLOC_00021463;geneIDs=comp256125_c0_seq1.path2;transcripts=comp256125_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	127092244	127092585	.	+	.	ID=comp256125_c0_seq1.mrna2;geneID=comp256125_c0_seq1.path2;Name=comp256125_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.2;matches=312;mismatches=5;indels=25;unknowns=0;Target=comp256125_c0_seq1 317 1 .;CDS_Target=comp256125_c0_seq1 247 2 .;locus=RLOC_00021463
Chr2	stalkie_big_nohaplotig	exon	127092244	127092585	91	+	.	Parent=comp256125_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	127092245	127092515	.	+	0	Parent=comp256125_c0_seq1.mrna2
Chr2	gffcl	locus	127092640	127093013	.	-	.	ID=RLOC_00021464;geneIDs=comp149711_c0_seq1.path1;transcripts=comp149711_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127092640	127093013	.	-	.	ID=comp149711_c0_seq1.mrna1;geneID=comp149711_c0_seq1.path1;Name=comp149711_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=374;mismatches=0;indels=0;unknowns=0;Target=comp149711_c0_seq1 374 1 .;CDS_Target=comp149711_c0_seq1 82 2 .;locus=RLOC_00021464
Chr2	stalkie_big_nohaplotig	exon	127092640	127093013	100	-	.	Parent=comp149711_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127092932	127093012	.	-	0	Parent=comp149711_c0_seq1.mrna1
Chr2	gffcl	locus	127094512	127094721	.	-	.	ID=RLOC_00021465;geneIDs=comp111804_c0_seq1.path1;transcripts=comp111804_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127094512	127094721	.	-	.	ID=comp111804_c0_seq1.mrna1;geneID=comp111804_c0_seq1.path1;Name=comp111804_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=210;mismatches=0;indels=0;unknowns=0;Target=comp111804_c0_seq1 210 1 .;CDS_Target=comp111804_c0_seq1 208 2 .;locus=RLOC_00021465
Chr2	stalkie_big_nohaplotig	exon	127094512	127094721	100	-	.	Parent=comp111804_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127094514	127094720	.	-	0	Parent=comp111804_c0_seq1.mrna1
Chr2	gffcl	locus	127097734	127098216	.	-	.	ID=RLOC_00021466;geneIDs=comp143207_c0_seq1.path1;transcripts=comp143207_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127097734	127098216	.	-	.	ID=comp143207_c0_seq1.mrna1;geneID=comp143207_c0_seq1.path1;Name=comp143207_c0_seq1;Dir=indeterminatecoverage=97.6;identity=99.6;matches=481;mismatches=2;indels=0;unknowns=0;Target=comp143207_c0_seq1 495 13 .;CDS_Target=comp143207_c0_seq1 358 218 .;locus=RLOC_00021466
Chr2	stalkie_big_nohaplotig	exon	127097734	127098216	99	-	.	Parent=comp143207_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127097871	127098011	.	-	0	Parent=comp143207_c0_seq1.mrna1
Chr2	gffcl	locus	127099079	127100561	.	+	.	ID=RLOC_00021467;geneIDs=comp149725_c0_seq1.path1;transcripts=comp149725_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127099079	127100561	.	+	.	ID=comp149725_c0_seq1.mrna1;geneID=comp149725_c0_seq1.path1;Name=comp149725_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1475;mismatches=6;indels=8;unknowns=0;Target=comp149725_c0_seq1 1487 1 .;CDS_Target=comp149725_c0_seq1 1199 1059 .;locus=RLOC_00021467
Chr2	stalkie_big_nohaplotig	exon	127099079	127100561	99	+	.	Parent=comp149725_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127100133	127100273	.	+	0	Parent=comp149725_c0_seq1.mrna1
Chr2	gffcl	locus	127118497	127118886	.	+	.	ID=RLOC_00021468;geneIDs=comp151944_c0_seq1.path1;transcripts=comp151944_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127118497	127118886	.	+	.	ID=comp151944_c0_seq1.mrna1;geneID=comp151944_c0_seq1.path1;Name=comp151944_c0_seq1;Dir=indeterminatecoverage=96.2;identity=89.2;matches=348;mismatches=33;indels=9;unknowns=0;Target=comp151944_c0_seq1 381 1 .;CDS_Target=comp151944_c0_seq1 249 205 .;locus=RLOC_00021468
Chr2	stalkie_big_nohaplotig	exon	127118497	127118886	89	+	.	Parent=comp151944_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127118702	127118754	.	+	0	Parent=comp151944_c0_seq1.mrna1
Chr2	gffcl	locus	127119450	127119723	.	+	.	ID=RLOC_00021469;geneIDs=comp149820_c0_seq1.path1;transcripts=comp149820_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127119450	127119723	.	+	.	ID=comp149820_c0_seq1.mrna1;geneID=comp149820_c0_seq1.path1;Name=comp149820_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.8;matches=257;mismatches=17;indels=6;unknowns=0;Target=comp149820_c0_seq1 280 1 .;CDS_Target=comp149820_c0_seq1 79 2 .;locus=RLOC_00021469
Chr2	stalkie_big_nohaplotig	exon	127119450	127119723	91	+	.	Parent=comp149820_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127119451	127119528	.	+	0	Parent=comp149820_c0_seq1.mrna1
Chr2	gffcl	locus	127122345	127122403	.	+	.	ID=RLOC_00021470;geneIDs=comp139075_c0_seq1.path1;transcripts=comp139075_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127122345	127122403	.	+	.	ID=comp139075_c0_seq1.mrna1;geneID=comp139075_c0_seq1.path1;Name=comp139075_c0_seq1;Dir=indeterminatecoverage=7.8;identity=96.6;matches=57;mismatches=2;indels=0;unknowns=0;Target=comp139075_c0_seq1 59 1 .;locus=RLOC_00021470
Chr2	stalkie_big_nohaplotig	exon	127122345	127122403	96	+	.	Parent=comp139075_c0_seq1.mrna1
Chr2	gffcl	locus	127123781	127124550	.	-	.	ID=RLOC_00021471;geneIDs=FBgn0038839.1.path1;transcripts=FBgn0038839.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127123781	127124550	.	-	.	ID=FBgn0038839.1.mrna1;geneID=FBgn0038839.1.path1;Name=FBgn0038839.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=766;mismatches=4;indels=1;unknowns=0;Target=FBgn0038839.1 771 1 .;CDS_Target=FBgn0038839.1 98 3 .;locus=RLOC_00021471
Chr2	stalkie_big_nohaplotig	exon	127123781	127124550	99	-	.	Parent=FBgn0038839.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127124454	127124548	.	-	0	Parent=FBgn0038839.1.mrna1
Chr2	gffcl	locus	127137331	127149762	.	.	.	ID=RLOC_00021472;geneIDs=FBgn0038840.1.path1,comp111804_c0_seq1.path2,comp145050_c1_seq1.path2,comp256125_c0_seq1.path1;transcripts=FBgn0038840.1.mrna1,comp111804_c0_seq1.mrna2,comp145050_c1_seq1.mrna2,comp256125_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127137331	127149762	.	+	.	ID=FBgn0038840.1.mrna1;geneID=FBgn0038840.1.path1;Name=FBgn0038840.1;Dir=sensecoverage=100.0;identity=99.4;matches=2427;mismatches=12;indels=3;unknowns=0;locus=RLOC_00021472
Chr2	stalkie_big_nohaplotig	exon	127137331	127137466	100	+	.	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 1 136 +
Chr2	stalkie_big_nohaplotig	exon	127140798	127140961	100	+	.	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 137 300 +
Chr2	stalkie_big_nohaplotig	exon	127141161	127141383	100	+	.	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 301 523 +
Chr2	stalkie_big_nohaplotig	exon	127141531	127141721	100	+	.	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 524 714 +
Chr2	stalkie_big_nohaplotig	exon	127141827	127142019	100	+	.	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 715 907 +
Chr2	stalkie_big_nohaplotig	exon	127143432	127143589	99	+	.	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 908 1065 +
Chr2	stalkie_big_nohaplotig	exon	127143686	127143907	98	+	.	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 1066 1287 +
Chr2	stalkie_big_nohaplotig	exon	127143995	127144201	98	+	.	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 1288 1494 +
Chr2	stalkie_big_nohaplotig	exon	127145784	127145868	98	+	.	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 1495 1579 +
Chr2	stalkie_big_nohaplotig	exon	127146715	127146991	99	+	.	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 1580 1856 +
Chr2	stalkie_big_nohaplotig	exon	127147082	127147283	100	+	.	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 1857 2058 +
Chr2	stalkie_big_nohaplotig	exon	127147450	127147676	98	+	.	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 2059 2282 +
Chr2	stalkie_big_nohaplotig	exon	127147837	127147952	99	+	.	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 2283 2398 +
Chr2	stalkie_big_nohaplotig	exon	127149722	127149762	97	+	.	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 2399 2439 +
Chr2	stalkie_big_nohaplotig	CDS	127137331	127137466	.	+	0	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 1 136 +
Chr2	stalkie_big_nohaplotig	CDS	127140798	127140961	.	+	2	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 137 300 +
Chr2	stalkie_big_nohaplotig	CDS	127141161	127141383	.	+	0	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 301 523 +
Chr2	stalkie_big_nohaplotig	CDS	127141531	127141721	.	+	2	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 524 714 +
Chr2	stalkie_big_nohaplotig	CDS	127141827	127142019	.	+	0	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 715 907 +
Chr2	stalkie_big_nohaplotig	CDS	127143432	127143589	.	+	2	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 908 1065 +
Chr2	stalkie_big_nohaplotig	CDS	127143686	127143907	.	+	0	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 1066 1287 +
Chr2	stalkie_big_nohaplotig	CDS	127143995	127144201	.	+	0	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 1288 1494 +
Chr2	stalkie_big_nohaplotig	CDS	127145784	127145868	.	+	0	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 1495 1579 +
Chr2	stalkie_big_nohaplotig	CDS	127146715	127146991	.	+	2	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 1580 1856 +
Chr2	stalkie_big_nohaplotig	CDS	127147082	127147283	.	+	1	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 1857 2058 +
Chr2	stalkie_big_nohaplotig	CDS	127147450	127147676	.	+	0	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 2059 2282 +
Chr2	stalkie_big_nohaplotig	CDS	127147837	127147952	.	+	1	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 2283 2398 +
Chr2	stalkie_big_nohaplotig	CDS	127149722	127149762	.	+	2	Parent=FBgn0038840.1.mrna1;Target=FBgn0038840.1 2399 2439 +
Chr2	stalkie_big_nohaplotig	mRNA	127147261	127147470	.	+	.	ID=comp111804_c0_seq1.mrna2;geneID=comp111804_c0_seq1.path2;Name=comp111804_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=208;mismatches=2;indels=0;unknowns=0;Target=comp111804_c0_seq1 210 1 .;CDS_Target=comp111804_c0_seq1 208 2 .;locus=RLOC_00021472
Chr2	stalkie_big_nohaplotig	exon	127147261	127147470	99	+	.	Parent=comp111804_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	127147262	127147468	.	+	0	Parent=comp111804_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	127147929	127148393	.	-	.	ID=comp145050_c1_seq1.mrna2;geneID=comp145050_c1_seq1.path2;Name=comp145050_c1_seq1;Dir=indeterminatecoverage=86.8;identity=97.9;matches=458;mismatches=7;indels=3;unknowns=0;Target=comp145050_c1_seq1 539 72 .;CDS_Target=comp145050_c1_seq1 301 224 .;locus=RLOC_00021472
Chr2	stalkie_big_nohaplotig	exon	127147929	127148393	97	-	.	Parent=comp145050_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	127148167	127148242	.	-	0	Parent=comp145050_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	127149424	127149745	.	-	.	ID=comp256125_c0_seq1.mrna1;geneID=comp256125_c0_seq1.path1;Name=comp256125_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=313;mismatches=4;indels=5;unknowns=0;Target=comp256125_c0_seq1 317 1 .;CDS_Target=comp256125_c0_seq1 247 2 .;locus=RLOC_00021472
Chr2	stalkie_big_nohaplotig	exon	127149424	127149745	97	-	.	Parent=comp256125_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127149494	127149744	.	-	0	Parent=comp256125_c0_seq1.mrna1
Chr2	gffcl	locus	127139025	127139230	.	+	.	ID=RLOC_00021473;geneIDs=comp3038678_c0_seq1.path1;transcripts=comp3038678_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127139025	127139230	.	+	.	ID=comp3038678_c0_seq1.mrna1;geneID=comp3038678_c0_seq1.path1;Name=comp3038678_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=206;mismatches=0;indels=0;unknowns=0;Target=comp3038678_c0_seq1 206 1 .;CDS_Target=comp3038678_c0_seq1 161 84 .;locus=RLOC_00021473
Chr2	stalkie_big_nohaplotig	exon	127139025	127139230	100	+	.	Parent=comp3038678_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127139108	127139185	.	+	0	Parent=comp3038678_c0_seq1.mrna1
Chr2	gffcl	locus	127144308	127144802	.	+	.	ID=RLOC_00021474;geneIDs=comp143207_c0_seq1.path2;transcripts=comp143207_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	127144308	127144802	.	+	.	ID=comp143207_c0_seq1.mrna2;geneID=comp143207_c0_seq1.path2;Name=comp143207_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=490;mismatches=5;indels=0;unknowns=0;Target=comp143207_c0_seq1 495 1 .;CDS_Target=comp143207_c0_seq1 358 218 .;locus=RLOC_00021474
Chr2	stalkie_big_nohaplotig	exon	127144308	127144802	98	+	.	Parent=comp143207_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	127144525	127144665	.	+	0	Parent=comp143207_c0_seq1.mrna2
Chr2	gffcl	locus	127150032	127150584	.	-	.	ID=RLOC_00021475;geneIDs=comp147636_c0_seq1.path2;transcripts=comp147636_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	127150032	127150584	.	-	.	ID=comp147636_c0_seq1.mrna2;geneID=comp147636_c0_seq1.path2;Name=comp147636_c0_seq1;Dir=indeterminatecoverage=97.9;identity=98.0;matches=546;mismatches=6;indels=5;unknowns=0;Target=comp147636_c0_seq1 556 1 .;CDS_Target=comp147636_c0_seq1 303 199 .;locus=RLOC_00021475
Chr2	stalkie_big_nohaplotig	exon	127150032	127150584	98	-	.	Parent=comp147636_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	127150286	127150386	.	-	0	Parent=comp147636_c0_seq1.mrna2
Chr2	gffcl	locus	127158804	127160641	.	+	.	ID=RLOC_00021477;geneIDs=ORF441.path1;transcripts=ORF441.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127158804	127160641	.	+	.	ID=ORF441.mrna1;geneID=ORF441.path1;Name=ORF441;Dir=indeterminatecoverage=100.0;identity=98.5;matches=1812;mismatches=5;indels=22;unknowns=0;Target=ORF441 1818 1 .;locus=RLOC_00021477
Chr2	stalkie_big_nohaplotig	exon	127158804	127160641	98	+	.	Parent=ORF441.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127158804	127160641	.	+	0	Parent=ORF441.mrna1
Chr2	gffcl	locus	127164021	127164469	.	+	.	ID=RLOC_00021478;geneIDs=comp154665_c0_seq1.path1;transcripts=comp154665_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127164021	127164469	.	+	.	ID=comp154665_c0_seq1.mrna1;geneID=comp154665_c0_seq1.path1;Name=comp154665_c0_seq1;Dir=indeterminatecoverage=88.3;identity=94.1;matches=429;mismatches=18;indels=9;unknowns=0;Target=comp154665_c0_seq1 454 1 .;CDS_Target=comp154665_c0_seq1 124 2 .;locus=RLOC_00021478
Chr2	stalkie_big_nohaplotig	exon	127164021	127164469	94	+	.	Parent=comp154665_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127164022	127164140	.	+	0	Parent=comp154665_c0_seq1.mrna1
Chr2	gffcl	locus	127164602	127164943	.	+	.	ID=RLOC_00021479;geneIDs=comp155404_c0_seq1.path1;transcripts=comp155404_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127164602	127164943	.	+	.	ID=comp155404_c0_seq1.mrna1;geneID=comp155404_c0_seq1.path1;Name=comp155404_c0_seq1;Dir=indeterminatecoverage=90.1;identity=90.7;matches=330;mismatches=12;indels=22;unknowns=0;Target=comp155404_c0_seq1 366 3 .;CDS_Target=comp155404_c0_seq1 259 203 .;locus=RLOC_00021479
Chr2	stalkie_big_nohaplotig	exon	127164602	127164943	90	+	.	Parent=comp155404_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127164802	127164852	.	+	0	Parent=comp155404_c0_seq1.mrna1
Chr2	gffcl	locus	127165060	127165583	.	.	.	ID=RLOC_00021480;geneIDs=comp142242_c0_seq1.path1,comp149943_c0_seq1.path1;transcripts=comp142242_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127165308	127165583	.	-	.	ID=comp142242_c0_seq1.mrna1;geneID=comp142242_c0_seq1.path1;Name=comp142242_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=275;mismatches=1;indels=0;unknowns=0;Target=comp142242_c0_seq1 276 1 .;CDS_Target=comp142242_c0_seq1 144 106 .;locus=RLOC_00021480
Chr2	stalkie_big_nohaplotig	exon	127165308	127165583	99	-	.	Parent=comp142242_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127165440	127165478	.	-	0	Parent=comp142242_c0_seq1.mrna1
Chr2	gffcl	locus	127238181	127238598	.	+	.	ID=RLOC_00021483;geneIDs=comp118884_c0_seq1.path1;transcripts=comp118884_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127238181	127238598	.	+	.	ID=comp118884_c0_seq1.mrna1;geneID=comp118884_c0_seq1.path1;Name=comp118884_c0_seq1;Dir=indeterminatecoverage=96.1;identity=99.5;matches=417;mismatches=1;indels=1;unknowns=0;Target=comp118884_c0_seq1 436 18 .;CDS_Target=comp118884_c0_seq1 254 102 .;locus=RLOC_00021483
Chr2	stalkie_big_nohaplotig	exon	127238181	127238598	99	+	.	Parent=comp118884_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127238265	127238416	.	+	0	Parent=comp118884_c0_seq1.mrna1
Chr2	gffcl	locus	127276048	127277091	.	-	.	ID=RLOC_00021484;geneIDs=ORF1616.path1;transcripts=ORF1616.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127276048	127277091	.	-	.	ID=ORF1616.mrna1;geneID=ORF1616.path1;Name=ORF1616;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1044;mismatches=0;indels=0;unknowns=0;Target=ORF1616 1044 1 .;locus=RLOC_00021484
Chr2	stalkie_big_nohaplotig	exon	127276048	127277091	100	-	.	Parent=ORF1616.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127276048	127277091	.	-	0	Parent=ORF1616.mrna1
Chr2	gffcl	locus	127284125	127284933	.	+	.	ID=RLOC_00021485;geneIDs=comp149744_c0_seq1.path1;transcripts=comp149744_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127284125	127284933	.	+	.	ID=comp149744_c0_seq1.mrna1;geneID=comp149744_c0_seq1.path1;Name=comp149744_c0_seq1;Dir=indeterminatecoverage=93.7;identity=85.3;matches=665;mismatches=47;indels=68;unknowns=0;locus=RLOC_00021485
Chr2	stalkie_big_nohaplotig	exon	127284125	127284603	81	+	.	Parent=comp149744_c0_seq1.mrna1;Target=comp149744_c0_seq1 449 26 .
Chr2	stalkie_big_nohaplotig	exon	127284636	127284933	91	+	.	Parent=comp149744_c0_seq1.mrna1;Target=comp149744_c0_seq1 740 450 .
Chr2	stalkie_big_nohaplotig	CDS	127284508	127284603	.	+	0	Parent=comp149744_c0_seq1.mrna1;Target=comp149744_c0_seq1 449 362 .
Chr2	stalkie_big_nohaplotig	CDS	127284636	127284652	.	+	0	Parent=comp149744_c0_seq1.mrna1;Target=comp149744_c0_seq1 466 450 .
Chr2	gffcl	locus	127303018	127325997	.	+	.	ID=RLOC_00021486;geneIDs=FBgn0038197.1.path2;transcripts=FBgn0038197.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	127303018	127325997	.	+	.	ID=FBgn0038197.1.mrna2;geneID=FBgn0038197.1.path2;Name=FBgn0038197.1;Dir=sensecoverage=73.9;identity=99.8;matches=1352;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021486
Chr2	stalkie_big_nohaplotig	exon	127303018	127303024	85	+	.	Parent=FBgn0038197.1.mrna2;Target=FBgn0038197.1 484 490 +
Chr2	stalkie_big_nohaplotig	exon	127307712	127307720	100	+	.	Parent=FBgn0038197.1.mrna2;Target=FBgn0038197.1 491 499 +
Chr2	stalkie_big_nohaplotig	exon	127319752	127319857	98	+	.	Parent=FBgn0038197.1.mrna2;Target=FBgn0038197.1 511 616 +
Chr2	stalkie_big_nohaplotig	exon	127320761	127320947	100	+	.	Parent=FBgn0038197.1.mrna2;Target=FBgn0038197.1 617 803 +
Chr2	stalkie_big_nohaplotig	exon	127323122	127323346	100	+	.	Parent=FBgn0038197.1.mrna2;Target=FBgn0038197.1 804 1028 +
Chr2	stalkie_big_nohaplotig	exon	127323595	127323757	100	+	.	Parent=FBgn0038197.1.mrna2;Target=FBgn0038197.1 1029 1191 +
Chr2	stalkie_big_nohaplotig	exon	127323830	127324034	100	+	.	Parent=FBgn0038197.1.mrna2;Target=FBgn0038197.1 1192 1396 +
Chr2	stalkie_big_nohaplotig	exon	127325463	127325581	100	+	.	Parent=FBgn0038197.1.mrna2;Target=FBgn0038197.1 1397 1515 +
Chr2	stalkie_big_nohaplotig	exon	127325665	127325997	100	+	.	Parent=FBgn0038197.1.mrna2;Target=FBgn0038197.1 1516 1848 +
Chr2	stalkie_big_nohaplotig	CDS	127319791	127319857	.	+	0	Parent=FBgn0038197.1.mrna2;Target=FBgn0038197.1 550 616 +
Chr2	stalkie_big_nohaplotig	CDS	127320761	127320947	.	+	2	Parent=FBgn0038197.1.mrna2;Target=FBgn0038197.1 617 803 +
Chr2	stalkie_big_nohaplotig	CDS	127323122	127323346	.	+	1	Parent=FBgn0038197.1.mrna2;Target=FBgn0038197.1 804 1028 +
Chr2	stalkie_big_nohaplotig	CDS	127323595	127323757	.	+	1	Parent=FBgn0038197.1.mrna2;Target=FBgn0038197.1 1029 1191 +
Chr2	stalkie_big_nohaplotig	CDS	127323830	127324034	.	+	0	Parent=FBgn0038197.1.mrna2;Target=FBgn0038197.1 1192 1396 +
Chr2	stalkie_big_nohaplotig	CDS	127325463	127325581	.	+	2	Parent=FBgn0038197.1.mrna2;Target=FBgn0038197.1 1397 1515 +
Chr2	stalkie_big_nohaplotig	CDS	127325665	127325997	.	+	0	Parent=FBgn0038197.1.mrna2;Target=FBgn0038197.1 1516 1848 +
Chr2	gffcl	locus	127334994	127335320	.	+	.	ID=RLOC_00021487;geneIDs=comp137301_c0_seq1.path1;transcripts=comp137301_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127334994	127335320	.	+	.	ID=comp137301_c0_seq1.mrna1;geneID=comp137301_c0_seq1.path1;Name=comp137301_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=326;mismatches=1;indels=1;unknowns=0;Target=comp137301_c0_seq1 328 1 .;CDS_Target=comp137301_c0_seq1 218 129 .;locus=RLOC_00021487
Chr2	stalkie_big_nohaplotig	exon	127334994	127335320	99	+	.	Parent=comp137301_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127335121	127335210	.	+	0	Parent=comp137301_c0_seq1.mrna1
Chr2	gffcl	locus	127344797	127345051	.	-	.	ID=RLOC_00021488;geneIDs=comp56180_c0_seq1.path1;transcripts=comp56180_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127344797	127345051	.	-	.	ID=comp56180_c0_seq1.mrna1;geneID=comp56180_c0_seq1.path1;Name=comp56180_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=254;mismatches=1;indels=0;unknowns=0;Target=comp56180_c0_seq1 255 1 .;CDS_Target=comp56180_c0_seq1 158 3 .;locus=RLOC_00021488
Chr2	stalkie_big_nohaplotig	exon	127344797	127345051	99	-	.	Parent=comp56180_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127344894	127345049	.	-	0	Parent=comp56180_c0_seq1.mrna1
Chr2	gffcl	locus	127350250	127350775	.	-	.	ID=RLOC_00021489;geneIDs=comp143429_c0_seq1.path1;transcripts=comp143429_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127350250	127350775	.	-	.	ID=comp143429_c0_seq1.mrna1;geneID=comp143429_c0_seq1.path1;Name=comp143429_c0_seq1;Dir=antisensecoverage=100.0;identity=94.7;matches=428;mismatches=12;indels=12;unknowns=0;Target=comp143429_c0_seq1 289 408 .;locus=RLOC_00021489
Chr2	stalkie_big_nohaplotig	exon	127350250	127350350	90	-	.	Parent=comp143429_c0_seq1.mrna1;Target=comp143429_c0_seq1 1 103 -
Chr2	stalkie_big_nohaplotig	exon	127350432	127350775	95	-	.	Parent=comp143429_c0_seq1.mrna1;Target=comp143429_c0_seq1 104 447 -
Chr2	stalkie_big_nohaplotig	CDS	127350617	127350736	.	-	0	Parent=comp143429_c0_seq1.mrna1
Chr2	gffcl	locus	127352987	127353955	.	-	.	ID=RLOC_00021490;geneIDs=ORF1888.path1;transcripts=ORF1888.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127352987	127353955	.	-	.	ID=ORF1888.mrna1;geneID=ORF1888.path1;Name=ORF1888;Dir=indeterminatecoverage=100.0;identity=100.0;matches=969;mismatches=0;indels=0;unknowns=0;Target=ORF1888 969 1 .;locus=RLOC_00021490
Chr2	stalkie_big_nohaplotig	exon	127352987	127353955	100	-	.	Parent=ORF1888.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127352987	127353955	.	-	0	Parent=ORF1888.mrna1
Chr2	gffcl	locus	127368997	127369888	.	+	.	ID=RLOC_00021492;geneIDs=comp156192_c0_seq1.path1;transcripts=comp156192_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127368997	127369888	.	+	.	ID=comp156192_c0_seq1.mrna1;geneID=comp156192_c0_seq1.path1;Name=comp156192_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=836;mismatches=2;indels=0;unknowns=0;Target=comp156192_c0_seq1 163 363 .;locus=RLOC_00021492
Chr2	stalkie_big_nohaplotig	exon	127368997	127369452	99	+	.	Parent=comp156192_c0_seq1.mrna1;Target=comp156192_c0_seq1 383 838 -
Chr2	stalkie_big_nohaplotig	exon	127369507	127369888	100	+	.	Parent=comp156192_c0_seq1.mrna1;Target=comp156192_c0_seq1 1 382 -
Chr2	stalkie_big_nohaplotig	CDS	127369526	127369726	.	+	0	Parent=comp156192_c0_seq1.mrna1
Chr2	gffcl	locus	127394611	127400856	.	+	.	ID=RLOC_00021493;geneIDs=FBgn0003231.1.path1;transcripts=FBgn0003231.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127394611	127400856	.	+	.	ID=FBgn0003231.1.mrna1;geneID=FBgn0003231.1.path1;Name=FBgn0003231.1;Dir=sensecoverage=100.0;identity=100.0;matches=2132;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021493
Chr2	stalkie_big_nohaplotig	exon	127394611	127394803	100	+	.	Parent=FBgn0003231.1.mrna1;Target=FBgn0003231.1 1 193 +
Chr2	stalkie_big_nohaplotig	exon	127398575	127399416	100	+	.	Parent=FBgn0003231.1.mrna1;Target=FBgn0003231.1 194 1035 +
Chr2	stalkie_big_nohaplotig	exon	127399481	127399838	100	+	.	Parent=FBgn0003231.1.mrna1;Target=FBgn0003231.1 1036 1393 +
Chr2	stalkie_big_nohaplotig	exon	127399911	127400504	99	+	.	Parent=FBgn0003231.1.mrna1;Target=FBgn0003231.1 1394 1987 +
Chr2	stalkie_big_nohaplotig	exon	127400711	127400856	100	+	.	Parent=FBgn0003231.1.mrna1;Target=FBgn0003231.1 1988 2133 +
Chr2	stalkie_big_nohaplotig	CDS	127394611	127394803	.	+	0	Parent=FBgn0003231.1.mrna1;Target=FBgn0003231.1 1 193 +
Chr2	stalkie_big_nohaplotig	CDS	127398575	127399416	.	+	2	Parent=FBgn0003231.1.mrna1;Target=FBgn0003231.1 194 1035 +
Chr2	stalkie_big_nohaplotig	CDS	127399481	127399838	.	+	0	Parent=FBgn0003231.1.mrna1;Target=FBgn0003231.1 1036 1393 +
Chr2	stalkie_big_nohaplotig	CDS	127399911	127400504	.	+	2	Parent=FBgn0003231.1.mrna1;Target=FBgn0003231.1 1394 1987 +
Chr2	stalkie_big_nohaplotig	CDS	127400711	127400856	.	+	2	Parent=FBgn0003231.1.mrna1;Target=FBgn0003231.1 1988 2133 +
Chr2	gffcl	locus	127402639	127409412	.	-	.	ID=RLOC_00021494;geneIDs=FBgn0051120.1.path1;transcripts=FBgn0051120.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127402639	127409412	.	-	.	ID=FBgn0051120.1.mrna1;geneID=FBgn0051120.1.path1;Name=FBgn0051120.1;Dir=sensecoverage=100.0;identity=100.0;matches=1680;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021494
Chr2	stalkie_big_nohaplotig	exon	127402639	127402958	100	-	.	Parent=FBgn0051120.1.mrna1;Target=FBgn0051120.1 1361 1680 +
Chr2	stalkie_big_nohaplotig	exon	127403016	127403157	100	-	.	Parent=FBgn0051120.1.mrna1;Target=FBgn0051120.1 1219 1360 +
Chr2	stalkie_big_nohaplotig	exon	127403220	127403695	100	-	.	Parent=FBgn0051120.1.mrna1;Target=FBgn0051120.1 743 1218 +
Chr2	stalkie_big_nohaplotig	exon	127403760	127403954	100	-	.	Parent=FBgn0051120.1.mrna1;Target=FBgn0051120.1 548 742 +
Chr2	stalkie_big_nohaplotig	exon	127404324	127404521	100	-	.	Parent=FBgn0051120.1.mrna1;Target=FBgn0051120.1 350 547 +
Chr2	stalkie_big_nohaplotig	exon	127404582	127404721	100	-	.	Parent=FBgn0051120.1.mrna1;Target=FBgn0051120.1 210 349 +
Chr2	stalkie_big_nohaplotig	exon	127404787	127404877	100	-	.	Parent=FBgn0051120.1.mrna1;Target=FBgn0051120.1 119 209 +
Chr2	stalkie_big_nohaplotig	exon	127409295	127409412	100	-	.	Parent=FBgn0051120.1.mrna1;Target=FBgn0051120.1 1 118 +
Chr2	stalkie_big_nohaplotig	CDS	127402639	127402958	.	-	2	Parent=FBgn0051120.1.mrna1;Target=FBgn0051120.1 1361 1680 +
Chr2	stalkie_big_nohaplotig	CDS	127403016	127403157	.	-	0	Parent=FBgn0051120.1.mrna1;Target=FBgn0051120.1 1219 1360 +
Chr2	stalkie_big_nohaplotig	CDS	127403220	127403695	.	-	2	Parent=FBgn0051120.1.mrna1;Target=FBgn0051120.1 743 1218 +
Chr2	stalkie_big_nohaplotig	CDS	127403760	127403954	.	-	2	Parent=FBgn0051120.1.mrna1;Target=FBgn0051120.1 548 742 +
Chr2	stalkie_big_nohaplotig	CDS	127404324	127404521	.	-	2	Parent=FBgn0051120.1.mrna1;Target=FBgn0051120.1 350 547 +
Chr2	stalkie_big_nohaplotig	CDS	127404582	127404721	.	-	1	Parent=FBgn0051120.1.mrna1;Target=FBgn0051120.1 210 349 +
Chr2	stalkie_big_nohaplotig	CDS	127404787	127404877	.	-	2	Parent=FBgn0051120.1.mrna1;Target=FBgn0051120.1 119 209 +
Chr2	stalkie_big_nohaplotig	CDS	127409295	127409412	.	-	0	Parent=FBgn0051120.1.mrna1;Target=FBgn0051120.1 1 118 +
Chr2	gffcl	locus	127414012	127415717	.	-	.	ID=RLOC_00021495;geneIDs=comp157771_c0_seq1.path1;transcripts=comp157771_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127414012	127415717	.	-	.	ID=comp157771_c0_seq1.mrna1;geneID=comp157771_c0_seq1.path1;Name=comp157771_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1645;mismatches=2;indels=0;unknowns=0;Target=comp157771_c0_seq1 1771 1472 .;locus=RLOC_00021495
Chr2	stalkie_big_nohaplotig	exon	127414012	127414980	100	-	.	Parent=comp157771_c0_seq1.mrna1;Target=comp157771_c0_seq1 1908 940 .
Chr2	stalkie_big_nohaplotig	exon	127415000	127415008	100	-	.	Parent=comp157771_c0_seq1.mrna1;Target=comp157771_c0_seq1 827 819 .
Chr2	stalkie_big_nohaplotig	exon	127415050	127415717	99	-	.	Parent=comp157771_c0_seq1.mrna1;Target=comp157771_c0_seq1 668 1 .
Chr2	stalkie_big_nohaplotig	CDS	127414149	127414448	.	-	0	Parent=comp157771_c0_seq1.mrna1
Chr2	gffcl	locus	127420237	127423832	.	+	.	ID=RLOC_00021496;geneIDs=ORF151.path1;transcripts=ORF151.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127420237	127423832	.	+	.	ID=ORF151.mrna1;geneID=ORF151.path1;Name=ORF151;Dir=sensecoverage=100.0;identity=100.0;matches=2759;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021496
Chr2	stalkie_big_nohaplotig	exon	127420237	127420330	98	+	.	Parent=ORF151.mrna1;Target=ORF151 1 94 +
Chr2	stalkie_big_nohaplotig	exon	127420417	127420491	100	+	.	Parent=ORF151.mrna1;Target=ORF151 95 169 +
Chr2	stalkie_big_nohaplotig	exon	127420582	127420956	100	+	.	Parent=ORF151.mrna1;Target=ORF151 170 544 +
Chr2	stalkie_big_nohaplotig	exon	127421013	127422263	100	+	.	Parent=ORF151.mrna1;Target=ORF151 545 1795 +
Chr2	stalkie_big_nohaplotig	exon	127422341	127422448	100	+	.	Parent=ORF151.mrna1;Target=ORF151 1796 1903 +
Chr2	stalkie_big_nohaplotig	exon	127422843	127423028	100	+	.	Parent=ORF151.mrna1;Target=ORF151 1904 2089 +
Chr2	stalkie_big_nohaplotig	exon	127423091	127423315	100	+	.	Parent=ORF151.mrna1;Target=ORF151 2090 2314 +
Chr2	stalkie_big_nohaplotig	exon	127423387	127423832	100	+	.	Parent=ORF151.mrna1;Target=ORF151 2315 2760 +
Chr2	stalkie_big_nohaplotig	CDS	127420237	127420330	.	+	0	Parent=ORF151.mrna1;Target=ORF151 1 94 +
Chr2	stalkie_big_nohaplotig	CDS	127420417	127420491	.	+	2	Parent=ORF151.mrna1;Target=ORF151 95 169 +
Chr2	stalkie_big_nohaplotig	CDS	127420582	127420956	.	+	2	Parent=ORF151.mrna1;Target=ORF151 170 544 +
Chr2	stalkie_big_nohaplotig	CDS	127421013	127422263	.	+	2	Parent=ORF151.mrna1;Target=ORF151 545 1795 +
Chr2	stalkie_big_nohaplotig	CDS	127422341	127422448	.	+	2	Parent=ORF151.mrna1;Target=ORF151 1796 1903 +
Chr2	stalkie_big_nohaplotig	CDS	127422843	127423028	.	+	2	Parent=ORF151.mrna1;Target=ORF151 1904 2089 +
Chr2	stalkie_big_nohaplotig	CDS	127423091	127423315	.	+	2	Parent=ORF151.mrna1;Target=ORF151 2090 2314 +
Chr2	stalkie_big_nohaplotig	CDS	127423387	127423832	.	+	2	Parent=ORF151.mrna1;Target=ORF151 2315 2760 +
Chr2	gffcl	locus	127451383	127452400	.	+	.	ID=RLOC_00021497;geneIDs=comp162356_c1_seq1.path3;transcripts=comp162356_c1_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	127451383	127452400	.	+	.	ID=comp162356_c1_seq1.mrna3;geneID=comp162356_c1_seq1.path3;Name=comp162356_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1016;mismatches=2;indels=0;unknowns=0;Target=comp162356_c1_seq1 1018 1 .;CDS_Target=comp162356_c1_seq1 1017 1 .;locus=RLOC_00021497
Chr2	stalkie_big_nohaplotig	exon	127451383	127452400	99	+	.	Parent=comp162356_c1_seq1.mrna3
Chr2	stalkie_big_nohaplotig	CDS	127451383	127452399	.	+	0	Parent=comp162356_c1_seq1.mrna3
Chr2	gffcl	locus	127476435	127478199	.	-	.	ID=RLOC_00021498;geneIDs=FBgn0038197.1.path1;transcripts=FBgn0038197.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127476435	127478199	.	-	.	ID=FBgn0038197.1.mrna1;geneID=FBgn0038197.1.path1;Name=FBgn0038197.1;Dir=sensecoverage=26.1;identity=100.0;matches=483;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021498
Chr2	stalkie_big_nohaplotig	exon	127476435	127476622	100	-	.	Parent=FBgn0038197.1.mrna1;Target=FBgn0038197.1 296 483 +
Chr2	stalkie_big_nohaplotig	exon	127477905	127478199	100	-	.	Parent=FBgn0038197.1.mrna1;Target=FBgn0038197.1 1 295 +
Chr2	gffcl	locus	127530525	127533142	.	+	.	ID=RLOC_00021499;geneIDs=comp156578_c0_seq1.path1;transcripts=comp156578_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127530525	127533142	.	+	.	ID=comp156578_c0_seq1.mrna1;geneID=comp156578_c0_seq1.path1;Name=comp156578_c0_seq1;Dir=sensecoverage=93.0;identity=99.9;matches=890;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021499
Chr2	stalkie_big_nohaplotig	exon	127530525	127530830	100	+	.	Parent=comp156578_c0_seq1.mrna1;Target=comp156578_c0_seq1 1 306 +
Chr2	stalkie_big_nohaplotig	exon	127532433	127532518	100	+	.	Parent=comp156578_c0_seq1.mrna1;Target=comp156578_c0_seq1 307 392 +
Chr2	stalkie_big_nohaplotig	exon	127532588	127532847	100	+	.	Parent=comp156578_c0_seq1.mrna1;Target=comp156578_c0_seq1 393 652 +
Chr2	stalkie_big_nohaplotig	exon	127532904	127533142	99	+	.	Parent=comp156578_c0_seq1.mrna1;Target=comp156578_c0_seq1 653 891 +
Chr2	stalkie_big_nohaplotig	CDS	127532453	127532518	.	+	0	Parent=comp156578_c0_seq1.mrna1;Target=comp156578_c0_seq1 327 392 +
Chr2	stalkie_big_nohaplotig	CDS	127532588	127532847	.	+	0	Parent=comp156578_c0_seq1.mrna1;Target=comp156578_c0_seq1 393 652 +
Chr2	stalkie_big_nohaplotig	CDS	127532904	127533012	.	+	1	Parent=comp156578_c0_seq1.mrna1;Target=comp156578_c0_seq1 653 761 +
Chr2	gffcl	locus	127556139	127562878	.	+	.	ID=RLOC_00021500;geneIDs=FBgn0039532.1.path1;transcripts=FBgn0039532.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127556139	127562878	.	+	.	ID=FBgn0039532.1.mrna1;geneID=FBgn0039532.1.path1;Name=FBgn0039532.1;Dir=sensecoverage=100.0;identity=100.0;matches=612;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021500
Chr2	stalkie_big_nohaplotig	exon	127556139	127556165	100	+	.	Parent=FBgn0039532.1.mrna1;Target=FBgn0039532.1 1 27 +
Chr2	stalkie_big_nohaplotig	exon	127559760	127559875	100	+	.	Parent=FBgn0039532.1.mrna1;Target=FBgn0039532.1 28 143 +
Chr2	stalkie_big_nohaplotig	exon	127559958	127560190	100	+	.	Parent=FBgn0039532.1.mrna1;Target=FBgn0039532.1 144 376 +
Chr2	stalkie_big_nohaplotig	exon	127560293	127560453	100	+	.	Parent=FBgn0039532.1.mrna1;Target=FBgn0039532.1 377 537 +
Chr2	stalkie_big_nohaplotig	exon	127562804	127562878	100	+	.	Parent=FBgn0039532.1.mrna1;Target=FBgn0039532.1 538 612 +
Chr2	stalkie_big_nohaplotig	CDS	127556139	127556165	.	+	0	Parent=FBgn0039532.1.mrna1;Target=FBgn0039532.1 1 27 +
Chr2	stalkie_big_nohaplotig	CDS	127559760	127559875	.	+	0	Parent=FBgn0039532.1.mrna1;Target=FBgn0039532.1 28 143 +
Chr2	stalkie_big_nohaplotig	CDS	127559958	127560190	.	+	1	Parent=FBgn0039532.1.mrna1;Target=FBgn0039532.1 144 376 +
Chr2	stalkie_big_nohaplotig	CDS	127560293	127560453	.	+	2	Parent=FBgn0039532.1.mrna1;Target=FBgn0039532.1 377 537 +
Chr2	stalkie_big_nohaplotig	CDS	127562804	127562878	.	+	0	Parent=FBgn0039532.1.mrna1;Target=FBgn0039532.1 538 612 +
Chr2	gffcl	locus	127567101	127633496	.	-	.	ID=RLOC_00021501;geneIDs=FBgn0051057.1.path1,FBgn0260945.1.path1,Dp_FBgn0248160.1.path1,comp151185_c0_seq1.path1;transcripts=Dp_FBgn0248160.1.mrna1,comp151185_c0_seq1.mrna1,FBgn0051057.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127567101	127579939	.	-	.	ID=Dp_FBgn0248160.1.mrna1;geneID=Dp_FBgn0248160.1.path1;Name=Dp_FBgn0248160.1;Dir=sensecoverage=100.0;identity=100.0;matches=213;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021501
Chr2	stalkie_big_nohaplotig	exon	127567101	127567289	100	-	.	Parent=Dp_FBgn0248160.1.mrna1;Target=Dp_FBgn0248160.1 25 213 +
Chr2	stalkie_big_nohaplotig	exon	127579916	127579939	100	-	.	Parent=Dp_FBgn0248160.1.mrna1;Target=Dp_FBgn0248160.1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	127567101	127567289	.	-	0	Parent=Dp_FBgn0248160.1.mrna1;Target=Dp_FBgn0248160.1 25 213 +
Chr2	stalkie_big_nohaplotig	CDS	127579916	127579939	.	-	0	Parent=Dp_FBgn0248160.1.mrna1;Target=Dp_FBgn0248160.1 1 24 +
Chr2	stalkie_big_nohaplotig	mRNA	127572966	127633335	.	-	.	ID=comp151185_c0_seq1.mrna1;geneID=comp151185_c0_seq1.path1;Name=comp151185_c0_seq1;Dir=antisensecoverage=99.8;identity=99.8;matches=1215;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021501
Chr2	stalkie_big_nohaplotig	exon	127572966	127573146	98	-	.	Parent=comp151185_c0_seq1.mrna1;Target=comp151185_c0_seq1 3 183 -
Chr2	stalkie_big_nohaplotig	exon	127573662	127573757	100	-	.	Parent=comp151185_c0_seq1.mrna1;Target=comp151185_c0_seq1 184 279 -
Chr2	stalkie_big_nohaplotig	exon	127579916	127580071	100	-	.	Parent=comp151185_c0_seq1.mrna1;Target=comp151185_c0_seq1 280 435 -
Chr2	stalkie_big_nohaplotig	exon	127580573	127580590	100	-	.	Parent=comp151185_c0_seq1.mrna1;Target=comp151185_c0_seq1 436 453 -
Chr2	stalkie_big_nohaplotig	exon	127583623	127583808	100	-	.	Parent=comp151185_c0_seq1.mrna1;Target=comp151185_c0_seq1 454 639 -
Chr2	stalkie_big_nohaplotig	exon	127584502	127584704	100	-	.	Parent=comp151185_c0_seq1.mrna1;Target=comp151185_c0_seq1 640 842 -
Chr2	stalkie_big_nohaplotig	exon	127586299	127586485	100	-	.	Parent=comp151185_c0_seq1.mrna1;Target=comp151185_c0_seq1 843 1029 -
Chr2	stalkie_big_nohaplotig	exon	127593287	127593330	100	-	.	Parent=comp151185_c0_seq1.mrna1;Target=comp151185_c0_seq1 1030 1073 -
Chr2	stalkie_big_nohaplotig	exon	127633190	127633335	100	-	.	Parent=comp151185_c0_seq1.mrna1;Target=comp151185_c0_seq1 1074 1219 -
Chr2	stalkie_big_nohaplotig	CDS	127573734	127573757	.	-	0	Parent=comp151185_c0_seq1.mrna1;Target=comp151185_c0_seq1 256 279 .
Chr2	stalkie_big_nohaplotig	CDS	127579916	127580071	.	-	0	Parent=comp151185_c0_seq1.mrna1;Target=comp151185_c0_seq1 280 435 .
Chr2	stalkie_big_nohaplotig	CDS	127580573	127580590	.	-	0	Parent=comp151185_c0_seq1.mrna1;Target=comp151185_c0_seq1 436 453 .
Chr2	stalkie_big_nohaplotig	CDS	127583623	127583808	.	-	0	Parent=comp151185_c0_seq1.mrna1;Target=comp151185_c0_seq1 454 639 .
Chr2	stalkie_big_nohaplotig	CDS	127584502	127584704	.	-	2	Parent=comp151185_c0_seq1.mrna1;Target=comp151185_c0_seq1 640 842 .
Chr2	stalkie_big_nohaplotig	CDS	127586299	127586485	.	-	0	Parent=comp151185_c0_seq1.mrna1;Target=comp151185_c0_seq1 843 1029 .
Chr2	stalkie_big_nohaplotig	CDS	127593287	127593330	.	-	2	Parent=comp151185_c0_seq1.mrna1;Target=comp151185_c0_seq1 1030 1073 .
Chr2	stalkie_big_nohaplotig	CDS	127633190	127633334	.	-	0	Parent=comp151185_c0_seq1.mrna1;Target=comp151185_c0_seq1 1074 1218 .
Chr2	stalkie_big_nohaplotig	mRNA	127573737	127633334	.	-	.	ID=FBgn0051057.1.mrna1;geneID=FBgn0051057.1.path1;Name=FBgn0051057.1;Dir=sensecoverage=100.0;identity=100.0;matches=942;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021501
Chr2	stalkie_big_nohaplotig	exon	127573737	127573757	100	-	.	Parent=FBgn0051057.1.mrna1;Target=FBgn0051057.1 922 942 +
Chr2	stalkie_big_nohaplotig	exon	127579916	127580071	100	-	.	Parent=FBgn0051057.1.mrna1;Target=FBgn0051057.1 766 921 +
Chr2	stalkie_big_nohaplotig	exon	127583623	127583808	100	-	.	Parent=FBgn0051057.1.mrna1;Target=FBgn0051057.1 580 765 +
Chr2	stalkie_big_nohaplotig	exon	127584502	127584704	100	-	.	Parent=FBgn0051057.1.mrna1;Target=FBgn0051057.1 377 579 +
Chr2	stalkie_big_nohaplotig	exon	127586299	127586485	100	-	.	Parent=FBgn0051057.1.mrna1;Target=FBgn0051057.1 190 376 +
Chr2	stalkie_big_nohaplotig	exon	127593287	127593330	100	-	.	Parent=FBgn0051057.1.mrna1;Target=FBgn0051057.1 146 189 +
Chr2	stalkie_big_nohaplotig	exon	127633190	127633334	100	-	.	Parent=FBgn0051057.1.mrna1;Target=FBgn0051057.1 1 145 +
Chr2	stalkie_big_nohaplotig	CDS	127573737	127573757	.	-	0	Parent=FBgn0051057.1.mrna1;Target=FBgn0051057.1 922 942 +
Chr2	stalkie_big_nohaplotig	CDS	127579916	127580071	.	-	0	Parent=FBgn0051057.1.mrna1;Target=FBgn0051057.1 766 921 +
Chr2	stalkie_big_nohaplotig	CDS	127583623	127583808	.	-	0	Parent=FBgn0051057.1.mrna1;Target=FBgn0051057.1 580 765 +
Chr2	stalkie_big_nohaplotig	CDS	127584502	127584704	.	-	2	Parent=FBgn0051057.1.mrna1;Target=FBgn0051057.1 377 579 +
Chr2	stalkie_big_nohaplotig	CDS	127586299	127586485	.	-	0	Parent=FBgn0051057.1.mrna1;Target=FBgn0051057.1 190 376 +
Chr2	stalkie_big_nohaplotig	CDS	127593287	127593330	.	-	2	Parent=FBgn0051057.1.mrna1;Target=FBgn0051057.1 146 189 +
Chr2	stalkie_big_nohaplotig	CDS	127633190	127633334	.	-	0	Parent=FBgn0051057.1.mrna1;Target=FBgn0051057.1 1 145 +
Chr2	gffcl	locus	127570362	127570527	.	.	.	ID=RLOC_00021502;geneIDs=comp147200_c0_seq1.path1,comp147200_c0_seq1.path2;transcripts=comp147200_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127570371	127570527	.	+	.	ID=comp147200_c0_seq1.mrna1;geneID=comp147200_c0_seq1.path1;Name=comp147200_c0_seq1;Dir=indeterminatecoverage=49.4;identity=100.0;matches=157;mismatches=0;indels=0;unknowns=0;Target=comp147200_c0_seq1 172 16 .;locus=RLOC_00021502
Chr2	stalkie_big_nohaplotig	exon	127570371	127570527	100	+	.	Parent=comp147200_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127570433	127570507	.	+	0	Parent=comp147200_c0_seq1.mrna1
Chr2	gffcl	locus	127570662	127570846	.	-	.	ID=RLOC_00021503;geneIDs=comp116060_c0_seq1.path1;transcripts=comp116060_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127570662	127570846	.	-	.	ID=comp116060_c0_seq1.mrna1;geneID=comp116060_c0_seq1.path1;Name=comp116060_c0_seq1;Dir=indeterminatecoverage=91.6;identity=100.0;matches=185;mismatches=0;indels=0;unknowns=0;Target=comp116060_c0_seq1 201 17 .;CDS_Target=comp116060_c0_seq1 89 18 .;locus=RLOC_00021503
Chr2	stalkie_big_nohaplotig	exon	127570662	127570846	100	-	.	Parent=comp116060_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127570774	127570845	.	-	0	Parent=comp116060_c0_seq1.mrna1
Chr2	gffcl	locus	127571437	127571690	.	+	.	ID=RLOC_00021504;geneIDs=comp118331_c0_seq1.path1;transcripts=comp118331_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127571437	127571690	.	+	.	ID=comp118331_c0_seq1.mrna1;geneID=comp118331_c0_seq1.path1;Name=comp118331_c0_seq1;Dir=indeterminatecoverage=100.0;identity=86.3;matches=234;mismatches=20;indels=17;unknowns=0;Target=comp118331_c0_seq1 271 1 .;CDS_Target=comp118331_c0_seq1 47 3 .;locus=RLOC_00021504
Chr2	stalkie_big_nohaplotig	exon	127571437	127571690	86	+	.	Parent=comp118331_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127571439	127571482	.	+	0	Parent=comp118331_c0_seq1.mrna1
Chr2	gffcl	locus	127573984	127575447	.	+	.	ID=RLOC_00021505;geneIDs=comp161996_c0_seq1.path1;transcripts=comp161996_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127573984	127575447	.	+	.	ID=comp161996_c0_seq1.mrna1;geneID=comp161996_c0_seq1.path1;Name=comp161996_c0_seq1;Dir=indeterminatecoverage=95.7;identity=96.4;matches=1432;mismatches=28;indels=25;unknowns=0;Target=comp161996_c0_seq1 1626 1534 .;locus=RLOC_00021505
Chr2	stalkie_big_nohaplotig	exon	127573984	127574717	95	+	.	Parent=comp161996_c0_seq1.mrna1;Target=comp161996_c0_seq1 828 78 .
Chr2	stalkie_big_nohaplotig	exon	127574721	127575447	97	+	.	Parent=comp161996_c0_seq1.mrna1;Target=comp161996_c0_seq1 1801 1069 .
Chr2	stalkie_big_nohaplotig	CDS	127575186	127575278	.	+	0	Parent=comp161996_c0_seq1.mrna1
Chr2	gffcl	locus	127575454	127575777	.	+	.	ID=RLOC_00021506;geneIDs=comp146266_c0_seq1.path1;transcripts=comp146266_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127575454	127575777	.	+	.	ID=comp146266_c0_seq1.mrna1;geneID=comp146266_c0_seq1.path1;Name=comp146266_c0_seq1;Dir=indeterminatecoverage=89.8;identity=99.4;matches=322;mismatches=2;indels=0;unknowns=0;Target=comp146266_c0_seq1 324 1 .;CDS_Target=comp146266_c0_seq1 226 149 .;locus=RLOC_00021506
Chr2	stalkie_big_nohaplotig	exon	127575454	127575777	99	+	.	Parent=comp146266_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127575602	127575679	.	+	0	Parent=comp146266_c0_seq1.mrna1
Chr2	gffcl	locus	127577378	127577972	.	-	.	ID=RLOC_00021507;geneIDs=comp148479_c0_seq1.path1;transcripts=comp148479_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127577378	127577972	.	-	.	ID=comp148479_c0_seq1.mrna1;geneID=comp148479_c0_seq1.path1;Name=comp148479_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=593;mismatches=2;indels=0;unknowns=0;Target=comp148479_c0_seq1 595 1 .;CDS_Target=comp148479_c0_seq1 228 169 .;locus=RLOC_00021507
Chr2	stalkie_big_nohaplotig	exon	127577378	127577972	99	-	.	Parent=comp148479_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127577745	127577804	.	-	0	Parent=comp148479_c0_seq1.mrna1
Chr2	gffcl	locus	127636478	127639568	.	+	.	ID=RLOC_00021508;geneIDs=FBgn0004106.4.path1;transcripts=FBgn0004106.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127636478	127639568	.	+	.	ID=FBgn0004106.4.mrna1;geneID=FBgn0004106.4.path1;Name=FBgn0004106.4;Dir=indeterminatecoverage=100.0;identity=99.5;matches=907;mismatches=5;indels=0;unknowns=0;locus=RLOC_00021508
Chr2	stalkie_big_nohaplotig	exon	127636478	127636641	100	+	.	Parent=FBgn0004106.4.mrna1;Target=FBgn0004106.4 164 1 .
Chr2	stalkie_big_nohaplotig	exon	127636697	127637200	99	+	.	Parent=FBgn0004106.4.mrna1;Target=FBgn0004106.4 668 165 .
Chr2	stalkie_big_nohaplotig	exon	127639325	127639568	98	+	.	Parent=FBgn0004106.4.mrna1;Target=FBgn0004106.4 912 669 .
Chr2	stalkie_big_nohaplotig	CDS	127636478	127636641	.	+	0	Parent=FBgn0004106.4.mrna1;Target=FBgn0004106.4 164 1 .
Chr2	stalkie_big_nohaplotig	CDS	127636697	127637200	.	+	1	Parent=FBgn0004106.4.mrna1;Target=FBgn0004106.4 668 165 .
Chr2	stalkie_big_nohaplotig	CDS	127639325	127639568	.	+	1	Parent=FBgn0004106.4.mrna1;Target=FBgn0004106.4 912 669 .
Chr2	gffcl	locus	127642327	127642625	.	-	.	ID=RLOC_00021509;geneIDs=comp153581_c0_seq1.path1;transcripts=comp153581_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127642327	127642625	.	-	.	ID=comp153581_c0_seq1.mrna1;geneID=comp153581_c0_seq1.path1;Name=comp153581_c0_seq1;Dir=indeterminatecoverage=96.8;identity=99.0;matches=296;mismatches=2;indels=1;unknowns=0;Target=comp153581_c0_seq1 308 11 .;CDS_Target=comp153581_c0_seq1 59 12 .;locus=RLOC_00021509
Chr2	stalkie_big_nohaplotig	exon	127642327	127642625	98	-	.	Parent=comp153581_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127642577	127642624	.	-	0	Parent=comp153581_c0_seq1.mrna1
Chr2	gffcl	locus	127643498	127644639	.	.	.	ID=RLOC_00021510;geneIDs=FBgn0002772.1.path1,comp144269_c1_seq1.path1;transcripts=FBgn0002772.1.mrna1,comp144269_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127643498	127644639	.	-	.	ID=FBgn0002772.1.mrna1;geneID=FBgn0002772.1.path1;Name=FBgn0002772.1;Dir=sensecoverage=100.0;identity=99.7;matches=344;mismatches=0;indels=1;unknowns=0;Target=FBgn0002772.1 3 101 +;locus=RLOC_00021510
Chr2	stalkie_big_nohaplotig	exon	127643498	127643538	100	-	.	Parent=FBgn0002772.1.mrna1;Target=FBgn0002772.1 305 345 +
Chr2	stalkie_big_nohaplotig	exon	127643849	127643935	100	-	.	Parent=FBgn0002772.1.mrna1;Target=FBgn0002772.1 218 304 +
Chr2	stalkie_big_nohaplotig	exon	127644424	127644639	99	-	.	Parent=FBgn0002772.1.mrna1;Target=FBgn0002772.1 1 217 +
Chr2	stalkie_big_nohaplotig	CDS	127644540	127644637	.	-	0	Parent=FBgn0002772.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127643516	127643871	.	+	.	ID=comp144269_c1_seq1.mrna1;geneID=comp144269_c1_seq1.path1;Name=comp144269_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=356;mismatches=0;indels=1;unknowns=0;Target=comp144269_c1_seq1 357 1 .;CDS_Target=comp144269_c1_seq1 127 2 .;locus=RLOC_00021510
Chr2	stalkie_big_nohaplotig	exon	127643516	127643871	99	+	.	Parent=comp144269_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127643517	127643641	.	+	0	Parent=comp144269_c1_seq1.mrna1
Chr2	gffcl	locus	127651376	127651601	.	+	.	ID=RLOC_00021511;geneIDs=comp135977_c0_seq1.path1;transcripts=comp135977_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127651376	127651601	.	+	.	ID=comp135977_c0_seq1.mrna1;geneID=comp135977_c0_seq1.path1;Name=comp135977_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=225;mismatches=1;indels=0;unknowns=0;Target=comp135977_c0_seq1 226 1 .;CDS_Target=comp135977_c0_seq1 66 1 .;locus=RLOC_00021511
Chr2	stalkie_big_nohaplotig	exon	127651376	127651601	99	+	.	Parent=comp135977_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127651376	127651441	.	+	0	Parent=comp135977_c0_seq1.mrna1
Chr2	gffcl	locus	127657322	127657981	.	-	.	ID=RLOC_00021512;geneIDs=comp136740_c1_seq1.path1;transcripts=comp136740_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127657322	127657981	.	-	.	ID=comp136740_c1_seq1.mrna1;geneID=comp136740_c1_seq1.path1;Name=comp136740_c1_seq1;Dir=indeterminatecoverage=99.0;identity=100.0;matches=660;mismatches=0;indels=0;unknowns=0;Target=comp136740_c1_seq1 660 1 .;CDS_Target=comp136740_c1_seq1 640 488 .;locus=RLOC_00021512
Chr2	stalkie_big_nohaplotig	exon	127657322	127657981	100	-	.	Parent=comp136740_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127657342	127657494	.	-	0	Parent=comp136740_c1_seq1.mrna1
Chr2	gffcl	locus	127671891	127699795	.	+	.	ID=RLOC_00021513;geneIDs=FBgn0039536.1.path1;transcripts=FBgn0039536.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127671891	127699795	.	+	.	ID=FBgn0039536.1.mrna1;geneID=FBgn0039536.1.path1;Name=FBgn0039536.1;Dir=sensecoverage=100.0;identity=99.9;matches=9244;mismatches=8;indels=0;unknowns=0;locus=RLOC_00021513
Chr2	stalkie_big_nohaplotig	exon	127671891	127672085	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 1 195 +
Chr2	stalkie_big_nohaplotig	exon	127677110	127677136	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 196 222 +
Chr2	stalkie_big_nohaplotig	exon	127678896	127678916	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 223 243 +
Chr2	stalkie_big_nohaplotig	exon	127678983	127679309	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 244 570 +
Chr2	stalkie_big_nohaplotig	exon	127679373	127679583	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 571 781 +
Chr2	stalkie_big_nohaplotig	exon	127679897	127679985	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 782 870 +
Chr2	stalkie_big_nohaplotig	exon	127680045	127680182	99	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 871 1008 +
Chr2	stalkie_big_nohaplotig	exon	127680241	127680554	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 1009 1322 +
Chr2	stalkie_big_nohaplotig	exon	127680618	127680811	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 1323 1516 +
Chr2	stalkie_big_nohaplotig	exon	127680880	127681052	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 1517 1689 +
Chr2	stalkie_big_nohaplotig	exon	127681348	127681460	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 1690 1802 +
Chr2	stalkie_big_nohaplotig	exon	127684549	127684690	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 1803 1944 +
Chr2	stalkie_big_nohaplotig	exon	127684756	127685191	99	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 1945 2380 +
Chr2	stalkie_big_nohaplotig	exon	127685266	127685463	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 2381 2578 +
Chr2	stalkie_big_nohaplotig	exon	127686062	127686416	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 2579 2933 +
Chr2	stalkie_big_nohaplotig	exon	127687579	127687684	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 2934 3039 +
Chr2	stalkie_big_nohaplotig	exon	127687734	127688351	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 3040 3657 +
Chr2	stalkie_big_nohaplotig	exon	127688413	127688637	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 3658 3882 +
Chr2	stalkie_big_nohaplotig	exon	127690626	127691037	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 3883 4294 +
Chr2	stalkie_big_nohaplotig	exon	127691101	127691199	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 4295 4393 +
Chr2	stalkie_big_nohaplotig	exon	127693069	127693206	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 4394 4531 +
Chr2	stalkie_big_nohaplotig	exon	127693270	127693580	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 4532 4842 +
Chr2	stalkie_big_nohaplotig	exon	127693839	127694017	99	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 4843 5021 +
Chr2	stalkie_big_nohaplotig	exon	127694086	127694448	99	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 5022 5384 +
Chr2	stalkie_big_nohaplotig	exon	127694505	127694715	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 5385 5595 +
Chr2	stalkie_big_nohaplotig	exon	127694788	127695129	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 5596 5937 +
Chr2	stalkie_big_nohaplotig	exon	127695204	127695419	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 5938 6153 +
Chr2	stalkie_big_nohaplotig	exon	127695576	127695879	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 6154 6457 +
Chr2	stalkie_big_nohaplotig	exon	127695966	127696270	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 6458 6762 +
Chr2	stalkie_big_nohaplotig	exon	127696341	127696766	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 6763 7188 +
Chr2	stalkie_big_nohaplotig	exon	127696826	127697044	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 7189 7407 +
Chr2	stalkie_big_nohaplotig	exon	127697823	127699286	99	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 7408 8871 +
Chr2	stalkie_big_nohaplotig	exon	127699343	127699511	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 8872 9040 +
Chr2	stalkie_big_nohaplotig	exon	127699584	127699795	100	+	.	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 9041 9252 +
Chr2	stalkie_big_nohaplotig	CDS	127671891	127672085	.	+	0	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 1 195 +
Chr2	stalkie_big_nohaplotig	CDS	127677110	127677136	.	+	0	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 196 222 +
Chr2	stalkie_big_nohaplotig	CDS	127678896	127678916	.	+	0	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 223 243 +
Chr2	stalkie_big_nohaplotig	CDS	127678983	127679309	.	+	0	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 244 570 +
Chr2	stalkie_big_nohaplotig	CDS	127679373	127679583	.	+	0	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 571 781 +
Chr2	stalkie_big_nohaplotig	CDS	127679897	127679985	.	+	2	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 782 870 +
Chr2	stalkie_big_nohaplotig	CDS	127680045	127680182	.	+	0	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 871 1008 +
Chr2	stalkie_big_nohaplotig	CDS	127680241	127680554	.	+	0	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 1009 1322 +
Chr2	stalkie_big_nohaplotig	CDS	127680618	127680811	.	+	1	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 1323 1516 +
Chr2	stalkie_big_nohaplotig	CDS	127680880	127681052	.	+	2	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 1517 1689 +
Chr2	stalkie_big_nohaplotig	CDS	127681348	127681460	.	+	0	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 1690 1802 +
Chr2	stalkie_big_nohaplotig	CDS	127684549	127684690	.	+	1	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 1803 1944 +
Chr2	stalkie_big_nohaplotig	CDS	127684756	127685191	.	+	0	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 1945 2380 +
Chr2	stalkie_big_nohaplotig	CDS	127685266	127685463	.	+	2	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 2381 2578 +
Chr2	stalkie_big_nohaplotig	CDS	127686062	127686416	.	+	2	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 2579 2933 +
Chr2	stalkie_big_nohaplotig	CDS	127687579	127687684	.	+	1	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 2934 3039 +
Chr2	stalkie_big_nohaplotig	CDS	127687734	127688351	.	+	0	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 3040 3657 +
Chr2	stalkie_big_nohaplotig	CDS	127688413	127688637	.	+	0	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 3658 3882 +
Chr2	stalkie_big_nohaplotig	CDS	127690626	127691037	.	+	0	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 3883 4294 +
Chr2	stalkie_big_nohaplotig	CDS	127691101	127691199	.	+	2	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 4295 4393 +
Chr2	stalkie_big_nohaplotig	CDS	127693069	127693206	.	+	2	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 4394 4531 +
Chr2	stalkie_big_nohaplotig	CDS	127693270	127693580	.	+	2	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 4532 4842 +
Chr2	stalkie_big_nohaplotig	CDS	127693839	127694017	.	+	0	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 4843 5021 +
Chr2	stalkie_big_nohaplotig	CDS	127694086	127694448	.	+	1	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 5022 5384 +
Chr2	stalkie_big_nohaplotig	CDS	127694505	127694715	.	+	1	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 5385 5595 +
Chr2	stalkie_big_nohaplotig	CDS	127694788	127695129	.	+	0	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 5596 5937 +
Chr2	stalkie_big_nohaplotig	CDS	127695204	127695419	.	+	0	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 5938 6153 +
Chr2	stalkie_big_nohaplotig	CDS	127695576	127695879	.	+	0	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 6154 6457 +
Chr2	stalkie_big_nohaplotig	CDS	127695966	127696270	.	+	2	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 6458 6762 +
Chr2	stalkie_big_nohaplotig	CDS	127696341	127696766	.	+	0	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 6763 7188 +
Chr2	stalkie_big_nohaplotig	CDS	127696826	127697044	.	+	0	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 7189 7407 +
Chr2	stalkie_big_nohaplotig	CDS	127697823	127699286	.	+	0	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 7408 8871 +
Chr2	stalkie_big_nohaplotig	CDS	127699343	127699511	.	+	0	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 8872 9040 +
Chr2	stalkie_big_nohaplotig	CDS	127699584	127699795	.	+	2	Parent=FBgn0039536.1.mrna1;Target=FBgn0039536.1 9041 9252 +
Chr2	gffcl	locus	127701657	127703079	.	-	.	ID=RLOC_00021514;geneIDs=FBgn0032321.1.path1;transcripts=FBgn0032321.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127701657	127703079	.	-	.	ID=FBgn0032321.1.mrna1;geneID=FBgn0032321.1.path1;Name=FBgn0032321.1;Dir=sensecoverage=100.0;identity=99.9;matches=1097;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021514
Chr2	stalkie_big_nohaplotig	exon	127701657	127701867	99	-	.	Parent=FBgn0032321.1.mrna1;Target=FBgn0032321.1 888 1098 +
Chr2	stalkie_big_nohaplotig	exon	127701928	127702201	100	-	.	Parent=FBgn0032321.1.mrna1;Target=FBgn0032321.1 614 887 +
Chr2	stalkie_big_nohaplotig	exon	127702314	127702626	100	-	.	Parent=FBgn0032321.1.mrna1;Target=FBgn0032321.1 301 613 +
Chr2	stalkie_big_nohaplotig	exon	127702687	127702819	100	-	.	Parent=FBgn0032321.1.mrna1;Target=FBgn0032321.1 168 300 +
Chr2	stalkie_big_nohaplotig	exon	127702913	127703079	100	-	.	Parent=FBgn0032321.1.mrna1;Target=FBgn0032321.1 1 167 +
Chr2	stalkie_big_nohaplotig	CDS	127701657	127701867	.	-	1	Parent=FBgn0032321.1.mrna1;Target=FBgn0032321.1 888 1098 +
Chr2	stalkie_big_nohaplotig	CDS	127701928	127702201	.	-	2	Parent=FBgn0032321.1.mrna1;Target=FBgn0032321.1 614 887 +
Chr2	stalkie_big_nohaplotig	CDS	127702314	127702626	.	-	0	Parent=FBgn0032321.1.mrna1;Target=FBgn0032321.1 301 613 +
Chr2	stalkie_big_nohaplotig	CDS	127702687	127702819	.	-	1	Parent=FBgn0032321.1.mrna1;Target=FBgn0032321.1 168 300 +
Chr2	stalkie_big_nohaplotig	CDS	127702913	127703079	.	-	0	Parent=FBgn0032321.1.mrna1;Target=FBgn0032321.1 1 167 +
Chr2	gffcl	locus	127705124	127705707	.	+	.	ID=RLOC_00021515;geneIDs=FBgn0039538.1.path1;transcripts=FBgn0039538.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127705124	127705707	.	+	.	ID=FBgn0039538.1.mrna1;geneID=FBgn0039538.1.path1;Name=FBgn0039538.1;Dir=sensecoverage=100.0;identity=100.0;matches=504;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021515
Chr2	stalkie_big_nohaplotig	exon	127705124	127705183	100	+	.	Parent=FBgn0039538.1.mrna1;Target=FBgn0039538.1 1 60 +
Chr2	stalkie_big_nohaplotig	exon	127705264	127705707	100	+	.	Parent=FBgn0039538.1.mrna1;Target=FBgn0039538.1 61 504 +
Chr2	stalkie_big_nohaplotig	CDS	127705124	127705183	.	+	0	Parent=FBgn0039538.1.mrna1;Target=FBgn0039538.1 1 60 +
Chr2	stalkie_big_nohaplotig	CDS	127705264	127705707	.	+	0	Parent=FBgn0039538.1.mrna1;Target=FBgn0039538.1 61 504 +
Chr2	gffcl	locus	127707941	127709409	.	-	.	ID=RLOC_00021516;geneIDs=FBgn0003330.1.path1;transcripts=FBgn0003330.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127707941	127709409	.	-	.	ID=FBgn0003330.1.mrna1;geneID=FBgn0003330.1.path1;Name=FBgn0003330.1;Dir=sensecoverage=100.0;identity=100.0;matches=1290;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021516
Chr2	stalkie_big_nohaplotig	exon	127707941	127707997	100	-	.	Parent=FBgn0003330.1.mrna1;Target=FBgn0003330.1 1234 1290 +
Chr2	stalkie_big_nohaplotig	exon	127708055	127708227	100	-	.	Parent=FBgn0003330.1.mrna1;Target=FBgn0003330.1 1061 1233 +
Chr2	stalkie_big_nohaplotig	exon	127708294	127708957	100	-	.	Parent=FBgn0003330.1.mrna1;Target=FBgn0003330.1 397 1060 +
Chr2	stalkie_big_nohaplotig	exon	127709014	127709409	100	-	.	Parent=FBgn0003330.1.mrna1;Target=FBgn0003330.1 1 396 +
Chr2	stalkie_big_nohaplotig	CDS	127707941	127707997	.	-	0	Parent=FBgn0003330.1.mrna1;Target=FBgn0003330.1 1234 1290 +
Chr2	stalkie_big_nohaplotig	CDS	127708055	127708227	.	-	2	Parent=FBgn0003330.1.mrna1;Target=FBgn0003330.1 1061 1233 +
Chr2	stalkie_big_nohaplotig	CDS	127708294	127708957	.	-	0	Parent=FBgn0003330.1.mrna1;Target=FBgn0003330.1 397 1060 +
Chr2	stalkie_big_nohaplotig	CDS	127709014	127709409	.	-	0	Parent=FBgn0003330.1.mrna1;Target=FBgn0003330.1 1 396 +
Chr2	gffcl	locus	127709466	129481070	.	-	.	ID=RLOC_00021517;geneIDs=comp153572_c0_seq1.path1;transcripts=comp153572_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127709466	129481070	.	-	.	ID=comp153572_c0_seq1.mrna1;geneID=comp153572_c0_seq1.path1;Name=comp153572_c0_seq1;Dir=indeterminatecoverage=94.1;identity=94.8;matches=1038;mismatches=13;indels=44;unknowns=0;Target=comp153572_c0_seq1 898 848 .;locus=RLOC_00021517
Chr2	stalkie_big_nohaplotig	exon	127709466	127709475	100	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 1169 1160 .
Chr2	stalkie_big_nohaplotig	exon	127722073	127722075	66	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 1094 1092 .
Chr2	stalkie_big_nohaplotig	exon	127722679	127722734	28	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 1091 1076 .
Chr2	stalkie_big_nohaplotig	exon	127741901	127741908	100	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 1075 1068 .
Chr2	stalkie_big_nohaplotig	exon	127741925	127741932	100	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 1013 1006 .
Chr2	stalkie_big_nohaplotig	exon	127743938	127743960	78	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 1005 987 .
Chr2	stalkie_big_nohaplotig	exon	127749238	127749243	100	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 986 981 .
Chr2	stalkie_big_nohaplotig	exon	127754307	127754310	100	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 980 977 .
Chr2	stalkie_big_nohaplotig	exon	127757245	127757247	100	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 976 974 .
Chr2	stalkie_big_nohaplotig	exon	127761730	127761737	100	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 973 966 .
Chr2	stalkie_big_nohaplotig	exon	127761822	127761824	100	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 965 963 .
Chr2	stalkie_big_nohaplotig	exon	127775330	127775339	100	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 962 953 .
Chr2	stalkie_big_nohaplotig	exon	127777665	127777672	100	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 952 945 .
Chr2	stalkie_big_nohaplotig	exon	127782521	127782524	100	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 944 941 .
Chr2	stalkie_big_nohaplotig	exon	127792696	127792698	100	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 940 938 .
Chr2	stalkie_big_nohaplotig	exon	127803861	127803864	100	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 937 934 .
Chr2	stalkie_big_nohaplotig	exon	127805840	127805844	100	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 933 929 .
Chr2	stalkie_big_nohaplotig	exon	127812276	127812279	100	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 928 925 .
Chr2	stalkie_big_nohaplotig	exon	127818073	127818077	100	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 924 920 .
Chr2	stalkie_big_nohaplotig	exon	127823437	127823444	100	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 919 912 .
Chr2	stalkie_big_nohaplotig	exon	127824321	127824323	100	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 911 909 .
Chr2	stalkie_big_nohaplotig	exon	127831930	127831938	77	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 908 900 .
Chr2	stalkie_big_nohaplotig	exon	129480172	129481070	99	-	.	Parent=comp153572_c0_seq1.mrna1;Target=comp153572_c0_seq1 899 1 .
Chr2	stalkie_big_nohaplotig	CDS	129480173	129480223	.	-	0	Parent=comp153572_c0_seq1.mrna1
Chr2	gffcl	locus	127729670	127730176	.	+	.	ID=RLOC_00021518;geneIDs=comp118119_c0_seq1.path1;transcripts=comp118119_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127729670	127730176	.	+	.	ID=comp118119_c0_seq1.mrna1;geneID=comp118119_c0_seq1.path1;Name=comp118119_c0_seq1;Dir=indeterminatecoverage=91.5;identity=100.0;matches=507;mismatches=0;indels=0;unknowns=0;Target=comp118119_c0_seq1 554 48 .;CDS_Target=comp118119_c0_seq1 305 48 .;locus=RLOC_00021518
Chr2	stalkie_big_nohaplotig	exon	127729670	127730176	100	+	.	Parent=comp118119_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127729670	127729927	.	+	0	Parent=comp118119_c0_seq1.mrna1
Chr2	gffcl	locus	127731831	127755239	.	+	.	ID=RLOC_00021519;geneIDs=FBgn0046258.1.path1;transcripts=FBgn0046258.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127731831	127755239	.	+	.	ID=FBgn0046258.1.mrna1;geneID=FBgn0046258.1.path1;Name=FBgn0046258.1;Dir=sensecoverage=100.0;identity=99.8;matches=1039;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021519
Chr2	stalkie_big_nohaplotig	exon	127731831	127731883	100	+	.	Parent=FBgn0046258.1.mrna1;Target=FBgn0046258.1 1 53 +
Chr2	stalkie_big_nohaplotig	exon	127747349	127747702	99	+	.	Parent=FBgn0046258.1.mrna1;Target=FBgn0046258.1 54 407 +
Chr2	stalkie_big_nohaplotig	exon	127748099	127748351	100	+	.	Parent=FBgn0046258.1.mrna1;Target=FBgn0046258.1 408 660 +
Chr2	stalkie_big_nohaplotig	exon	127754859	127755239	100	+	.	Parent=FBgn0046258.1.mrna1;Target=FBgn0046258.1 661 1041 +
Chr2	stalkie_big_nohaplotig	CDS	127731831	127731883	.	+	0	Parent=FBgn0046258.1.mrna1;Target=FBgn0046258.1 1 53 +
Chr2	stalkie_big_nohaplotig	CDS	127747349	127747702	.	+	1	Parent=FBgn0046258.1.mrna1;Target=FBgn0046258.1 54 407 +
Chr2	stalkie_big_nohaplotig	CDS	127748099	127748351	.	+	1	Parent=FBgn0046258.1.mrna1;Target=FBgn0046258.1 408 660 +
Chr2	stalkie_big_nohaplotig	CDS	127754859	127755239	.	+	0	Parent=FBgn0046258.1.mrna1;Target=FBgn0046258.1 661 1041 +
Chr2	gffcl	locus	127734615	127737379	.	+	.	ID=RLOC_00021520;geneIDs=comp163032_c0_seq1.path1;transcripts=comp163032_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127734615	127737379	.	+	.	ID=comp163032_c0_seq1.mrna1;geneID=comp163032_c0_seq1.path1;Name=comp163032_c0_seq1;Dir=indeterminatecoverage=80.3;identity=95.6;matches=2634;mismatches=79;indels=43;unknowns=0;Target=comp163032_c0_seq1 2124 1813 .;locus=RLOC_00021520
Chr2	stalkie_big_nohaplotig	exon	127734615	127734910	77	+	.	Parent=comp163032_c0_seq1.mrna1;Target=comp163032_c0_seq1 855 547 .
Chr2	stalkie_big_nohaplotig	exon	127734934	127737379	97	+	.	Parent=comp163032_c0_seq1.mrna1;Target=comp163032_c0_seq1 3305 888 .
Chr2	stalkie_big_nohaplotig	CDS	127735888	127736199	.	+	0	Parent=comp163032_c0_seq1.mrna1
Chr2	gffcl	locus	127756535	127756977	.	-	.	ID=RLOC_00021521;geneIDs=comp162892_c0_seq1.path1;transcripts=comp162892_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127756535	127756977	.	-	.	ID=comp162892_c0_seq1.mrna1;geneID=comp162892_c0_seq1.path1;Name=comp162892_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=440;mismatches=3;indels=0;unknowns=0;Target=comp162892_c0_seq1 443 1 .;CDS_Target=comp162892_c0_seq1 72 1 .;locus=RLOC_00021521
Chr2	stalkie_big_nohaplotig	exon	127756535	127756977	99	-	.	Parent=comp162892_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127756906	127756977	.	-	0	Parent=comp162892_c0_seq1.mrna1
Chr2	gffcl	locus	127757796	127758517	.	+	.	ID=RLOC_00021522;geneIDs=comp136713_c0_seq1.path1,comp146982_c0_seq1.path1;transcripts=comp136713_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127758097	127758517	.	+	.	ID=comp136713_c0_seq1.mrna1;geneID=comp136713_c0_seq1.path1;Name=comp136713_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=420;mismatches=1;indels=0;unknowns=0;Target=comp136713_c0_seq1 421 1 .;CDS_Target=comp136713_c0_seq1 268 227 .;locus=RLOC_00021522
Chr2	stalkie_big_nohaplotig	exon	127758097	127758517	99	+	.	Parent=comp136713_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127758323	127758364	.	+	0	Parent=comp136713_c0_seq1.mrna1
Chr2	gffcl	locus	127774743	127777549	.	+	.	ID=RLOC_00021523;geneIDs=FBgn0263025.1.path1;transcripts=FBgn0263025.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127774743	127777549	.	+	.	ID=FBgn0263025.1.mrna1;geneID=FBgn0263025.1.path1;Name=FBgn0263025.1;Dir=sensecoverage=100.0;identity=99.9;matches=1319;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021523
Chr2	stalkie_big_nohaplotig	exon	127774743	127775323	99	+	.	Parent=FBgn0263025.1.mrna1;Target=FBgn0263025.1 1 581 +
Chr2	stalkie_big_nohaplotig	exon	127776755	127777118	100	+	.	Parent=FBgn0263025.1.mrna1;Target=FBgn0263025.1 582 945 +
Chr2	stalkie_big_nohaplotig	exon	127777175	127777549	100	+	.	Parent=FBgn0263025.1.mrna1;Target=FBgn0263025.1 946 1320 +
Chr2	stalkie_big_nohaplotig	CDS	127774743	127775323	.	+	0	Parent=FBgn0263025.1.mrna1;Target=FBgn0263025.1 1 581 +
Chr2	stalkie_big_nohaplotig	CDS	127776755	127777118	.	+	1	Parent=FBgn0263025.1.mrna1;Target=FBgn0263025.1 582 945 +
Chr2	stalkie_big_nohaplotig	CDS	127777175	127777549	.	+	0	Parent=FBgn0263025.1.mrna1;Target=FBgn0263025.1 946 1320 +
Chr2	gffcl	locus	127778002	127785494	.	-	.	ID=RLOC_00021524;geneIDs=FBgn0086346.1.path1;transcripts=FBgn0086346.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127778002	127785494	.	-	.	ID=FBgn0086346.1.mrna1;geneID=FBgn0086346.1.path1;Name=FBgn0086346.1;Dir=sensecoverage=100.0;identity=99.9;matches=2529;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021524
Chr2	stalkie_big_nohaplotig	exon	127778002	127778117	100	-	.	Parent=FBgn0086346.1.mrna1;Target=FBgn0086346.1 2417 2532 +
Chr2	stalkie_big_nohaplotig	exon	127778183	127778380	100	-	.	Parent=FBgn0086346.1.mrna1;Target=FBgn0086346.1 2219 2416 +
Chr2	stalkie_big_nohaplotig	exon	127778447	127779092	100	-	.	Parent=FBgn0086346.1.mrna1;Target=FBgn0086346.1 1573 2218 +
Chr2	stalkie_big_nohaplotig	exon	127779161	127780110	99	-	.	Parent=FBgn0086346.1.mrna1;Target=FBgn0086346.1 623 1572 +
Chr2	stalkie_big_nohaplotig	exon	127780188	127780469	100	-	.	Parent=FBgn0086346.1.mrna1;Target=FBgn0086346.1 341 622 +
Chr2	stalkie_big_nohaplotig	exon	127784828	127784946	100	-	.	Parent=FBgn0086346.1.mrna1;Target=FBgn0086346.1 222 340 +
Chr2	stalkie_big_nohaplotig	exon	127785274	127785494	99	-	.	Parent=FBgn0086346.1.mrna1;Target=FBgn0086346.1 1 221 +
Chr2	stalkie_big_nohaplotig	CDS	127778002	127778117	.	-	2	Parent=FBgn0086346.1.mrna1;Target=FBgn0086346.1 2417 2532 +
Chr2	stalkie_big_nohaplotig	CDS	127778183	127778380	.	-	2	Parent=FBgn0086346.1.mrna1;Target=FBgn0086346.1 2219 2416 +
Chr2	stalkie_big_nohaplotig	CDS	127778447	127779092	.	-	0	Parent=FBgn0086346.1.mrna1;Target=FBgn0086346.1 1573 2218 +
Chr2	stalkie_big_nohaplotig	CDS	127779161	127780110	.	-	2	Parent=FBgn0086346.1.mrna1;Target=FBgn0086346.1 623 1572 +
Chr2	stalkie_big_nohaplotig	CDS	127780188	127780469	.	-	2	Parent=FBgn0086346.1.mrna1;Target=FBgn0086346.1 341 622 +
Chr2	stalkie_big_nohaplotig	CDS	127784828	127784946	.	-	1	Parent=FBgn0086346.1.mrna1;Target=FBgn0086346.1 222 340 +
Chr2	stalkie_big_nohaplotig	CDS	127785274	127785494	.	-	0	Parent=FBgn0086346.1.mrna1;Target=FBgn0086346.1 1 221 +
Chr2	gffcl	locus	127794795	127799580	.	-	.	ID=RLOC_00021525;geneIDs=FBgn0039543.1.path1;transcripts=FBgn0039543.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127794795	127799580	.	-	.	ID=FBgn0039543.1.mrna1;geneID=FBgn0039543.1.path1;Name=FBgn0039543.1;Dir=sensecoverage=100.0;identity=99.9;matches=1858;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021525
Chr2	stalkie_big_nohaplotig	exon	127794795	127794921	100	-	.	Parent=FBgn0039543.1.mrna1;Target=FBgn0039543.1 1734 1860 +
Chr2	stalkie_big_nohaplotig	exon	127794980	127795396	100	-	.	Parent=FBgn0039543.1.mrna1;Target=FBgn0039543.1 1317 1733 +
Chr2	stalkie_big_nohaplotig	exon	127796450	127796580	98	-	.	Parent=FBgn0039543.1.mrna1;Target=FBgn0039543.1 1186 1316 +
Chr2	stalkie_big_nohaplotig	exon	127796646	127796837	100	-	.	Parent=FBgn0039543.1.mrna1;Target=FBgn0039543.1 994 1185 +
Chr2	stalkie_big_nohaplotig	exon	127796888	127797103	100	-	.	Parent=FBgn0039543.1.mrna1;Target=FBgn0039543.1 778 993 +
Chr2	stalkie_big_nohaplotig	exon	127798681	127798886	100	-	.	Parent=FBgn0039543.1.mrna1;Target=FBgn0039543.1 572 777 +
Chr2	stalkie_big_nohaplotig	exon	127798942	127799125	100	-	.	Parent=FBgn0039543.1.mrna1;Target=FBgn0039543.1 388 571 +
Chr2	stalkie_big_nohaplotig	exon	127799194	127799580	100	-	.	Parent=FBgn0039543.1.mrna1;Target=FBgn0039543.1 1 387 +
Chr2	stalkie_big_nohaplotig	CDS	127794795	127794921	.	-	1	Parent=FBgn0039543.1.mrna1;Target=FBgn0039543.1 1734 1860 +
Chr2	stalkie_big_nohaplotig	CDS	127794980	127795396	.	-	1	Parent=FBgn0039543.1.mrna1;Target=FBgn0039543.1 1317 1733 +
Chr2	stalkie_big_nohaplotig	CDS	127796450	127796580	.	-	0	Parent=FBgn0039543.1.mrna1;Target=FBgn0039543.1 1186 1316 +
Chr2	stalkie_big_nohaplotig	CDS	127796646	127796837	.	-	0	Parent=FBgn0039543.1.mrna1;Target=FBgn0039543.1 994 1185 +
Chr2	stalkie_big_nohaplotig	CDS	127796888	127797103	.	-	0	Parent=FBgn0039543.1.mrna1;Target=FBgn0039543.1 778 993 +
Chr2	stalkie_big_nohaplotig	CDS	127798681	127798886	.	-	2	Parent=FBgn0039543.1.mrna1;Target=FBgn0039543.1 572 777 +
Chr2	stalkie_big_nohaplotig	CDS	127798942	127799125	.	-	0	Parent=FBgn0039543.1.mrna1;Target=FBgn0039543.1 388 571 +
Chr2	stalkie_big_nohaplotig	CDS	127799194	127799580	.	-	0	Parent=FBgn0039543.1.mrna1;Target=FBgn0039543.1 1 387 +
Chr2	gffcl	locus	127810238	127814797	.	+	.	ID=RLOC_00021526;geneIDs=FBgn0039544.1.path1;transcripts=FBgn0039544.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127810238	127814797	.	+	.	ID=FBgn0039544.1.mrna1;geneID=FBgn0039544.1.path1;Name=FBgn0039544.1;Dir=sensecoverage=100.0;identity=100.0;matches=2891;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021526
Chr2	stalkie_big_nohaplotig	exon	127810238	127810358	100	+	.	Parent=FBgn0039544.1.mrna1;Target=FBgn0039544.1 1 121 +
Chr2	stalkie_big_nohaplotig	exon	127810431	127811596	100	+	.	Parent=FBgn0039544.1.mrna1;Target=FBgn0039544.1 122 1287 +
Chr2	stalkie_big_nohaplotig	exon	127811651	127811831	100	+	.	Parent=FBgn0039544.1.mrna1;Target=FBgn0039544.1 1288 1468 +
Chr2	stalkie_big_nohaplotig	exon	127812110	127812261	100	+	.	Parent=FBgn0039544.1.mrna1;Target=FBgn0039544.1 1469 1620 +
Chr2	stalkie_big_nohaplotig	exon	127812813	127812947	100	+	.	Parent=FBgn0039544.1.mrna1;Target=FBgn0039544.1 1621 1755 +
Chr2	stalkie_big_nohaplotig	exon	127813023	127813125	100	+	.	Parent=FBgn0039544.1.mrna1;Target=FBgn0039544.1 1756 1858 +
Chr2	stalkie_big_nohaplotig	exon	127813455	127813554	100	+	.	Parent=FBgn0039544.1.mrna1;Target=FBgn0039544.1 1859 1958 +
Chr2	stalkie_big_nohaplotig	exon	127813617	127813912	100	+	.	Parent=FBgn0039544.1.mrna1;Target=FBgn0039544.1 1959 2254 +
Chr2	stalkie_big_nohaplotig	exon	127813981	127814281	99	+	.	Parent=FBgn0039544.1.mrna1;Target=FBgn0039544.1 2255 2555 +
Chr2	stalkie_big_nohaplotig	exon	127814389	127814648	100	+	.	Parent=FBgn0039544.1.mrna1;Target=FBgn0039544.1 2556 2815 +
Chr2	stalkie_big_nohaplotig	exon	127814721	127814797	100	+	.	Parent=FBgn0039544.1.mrna1;Target=FBgn0039544.1 2816 2892 +
Chr2	stalkie_big_nohaplotig	CDS	127810238	127810358	.	+	0	Parent=FBgn0039544.1.mrna1;Target=FBgn0039544.1 1 121 +
Chr2	stalkie_big_nohaplotig	CDS	127810431	127811596	.	+	2	Parent=FBgn0039544.1.mrna1;Target=FBgn0039544.1 122 1287 +
Chr2	stalkie_big_nohaplotig	CDS	127811651	127811831	.	+	0	Parent=FBgn0039544.1.mrna1;Target=FBgn0039544.1 1288 1468 +
Chr2	stalkie_big_nohaplotig	CDS	127812110	127812261	.	+	2	Parent=FBgn0039544.1.mrna1;Target=FBgn0039544.1 1469 1620 +
Chr2	stalkie_big_nohaplotig	CDS	127812813	127812947	.	+	0	Parent=FBgn0039544.1.mrna1;Target=FBgn0039544.1 1621 1755 +
Chr2	stalkie_big_nohaplotig	CDS	127813023	127813125	.	+	0	Parent=FBgn0039544.1.mrna1;Target=FBgn0039544.1 1756 1858 +
Chr2	stalkie_big_nohaplotig	CDS	127813455	127813554	.	+	2	Parent=FBgn0039544.1.mrna1;Target=FBgn0039544.1 1859 1958 +
Chr2	stalkie_big_nohaplotig	CDS	127813617	127813912	.	+	1	Parent=FBgn0039544.1.mrna1;Target=FBgn0039544.1 1959 2254 +
Chr2	stalkie_big_nohaplotig	CDS	127813981	127814281	.	+	2	Parent=FBgn0039544.1.mrna1;Target=FBgn0039544.1 2255 2555 +
Chr2	stalkie_big_nohaplotig	CDS	127814389	127814648	.	+	1	Parent=FBgn0039544.1.mrna1;Target=FBgn0039544.1 2556 2815 +
Chr2	stalkie_big_nohaplotig	CDS	127814721	127814797	.	+	2	Parent=FBgn0039544.1.mrna1;Target=FBgn0039544.1 2816 2892 +
Chr2	gffcl	locus	127897336	127898022	.	-	.	ID=RLOC_00021527;geneIDs=comp134775_c0_seq1.path1;transcripts=comp134775_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127897336	127898022	.	-	.	ID=comp134775_c0_seq1.mrna1;geneID=comp134775_c0_seq1.path1;Name=comp134775_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.4;matches=677;mismatches=10;indels=1;unknowns=0;Target=comp134775_c0_seq1 688 1 .;CDS_Target=comp134775_c0_seq1 300 184 .;locus=RLOC_00021527
Chr2	stalkie_big_nohaplotig	exon	127897336	127898022	98	-	.	Parent=comp134775_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	127897723	127897839	.	-	0	Parent=comp134775_c0_seq1.mrna1
Chr2	gffcl	locus	127898781	127904450	.	-	.	ID=RLOC_00021528;geneIDs=FBgn0005659.1.path1;transcripts=FBgn0005659.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127898781	127904450	.	-	.	ID=FBgn0005659.1.mrna1;geneID=FBgn0005659.1.path1;Name=FBgn0005659.1;Dir=sensecoverage=95.7;identity=99.5;matches=1725;mismatches=6;indels=3;unknowns=0;locus=RLOC_00021528
Chr2	stalkie_big_nohaplotig	exon	127898781	127899196	100	-	.	Parent=FBgn0005659.1.mrna1;Target=FBgn0005659.1 1397 1812 +
Chr2	stalkie_big_nohaplotig	exon	127899268	127899508	98	-	.	Parent=FBgn0005659.1.mrna1;Target=FBgn0005659.1 1153 1396 +
Chr2	stalkie_big_nohaplotig	exon	127903292	127903452	100	-	.	Parent=FBgn0005659.1.mrna1;Target=FBgn0005659.1 992 1152 +
Chr2	stalkie_big_nohaplotig	exon	127903538	127904450	99	-	.	Parent=FBgn0005659.1.mrna1;Target=FBgn0005659.1 79 991 +
Chr2	stalkie_big_nohaplotig	CDS	127898781	127899196	.	-	2	Parent=FBgn0005659.1.mrna1;Target=FBgn0005659.1 1397 1812 +
Chr2	stalkie_big_nohaplotig	CDS	127899268	127899508	.	-	0	Parent=FBgn0005659.1.mrna1;Target=FBgn0005659.1 1153 1396 +
Chr2	stalkie_big_nohaplotig	CDS	127903292	127903452	.	-	2	Parent=FBgn0005659.1.mrna1;Target=FBgn0005659.1 992 1152 +
Chr2	stalkie_big_nohaplotig	CDS	127903538	127904450	.	-	0	Parent=FBgn0005659.1.mrna1;Target=FBgn0005659.1 79 991 +
Chr2	gffcl	locus	127924492	127925628	.	+	.	ID=RLOC_00021529;geneIDs=FBgn0062412.3.path1;transcripts=FBgn0062412.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127924492	127925628	.	+	.	ID=FBgn0062412.3.mrna1;geneID=FBgn0062412.3.path1;Name=FBgn0062412.3;Dir=sensecoverage=100.0;identity=99.7;matches=619;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021529
Chr2	stalkie_big_nohaplotig	exon	127924492	127924635	100	+	.	Parent=FBgn0062412.3.mrna1;Target=FBgn0062412.3 1 144 +
Chr2	stalkie_big_nohaplotig	exon	127925152	127925628	99	+	.	Parent=FBgn0062412.3.mrna1;Target=FBgn0062412.3 145 621 +
Chr2	stalkie_big_nohaplotig	CDS	127924492	127924635	.	+	0	Parent=FBgn0062412.3.mrna1;Target=FBgn0062412.3 1 144 +
Chr2	stalkie_big_nohaplotig	CDS	127925152	127925628	.	+	0	Parent=FBgn0062412.3.mrna1;Target=FBgn0062412.3 145 621 +
Chr2	gffcl	locus	127931852	127947379	.	+	.	ID=RLOC_00021530;geneIDs=comp113116_c0_seq1.path1;transcripts=comp113116_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	127931852	127947379	.	+	.	ID=comp113116_c0_seq1.mrna1;geneID=comp113116_c0_seq1.path1;Name=comp113116_c0_seq1;Dir=indeterminatecoverage=87.4;identity=100.0;matches=215;mismatches=0;indels=0;unknowns=0;Target=comp113116_c0_seq1 114 35 .;locus=RLOC_00021530
Chr2	stalkie_big_nohaplotig	exon	127931852	127931854	100	+	.	Parent=comp113116_c0_seq1.mrna1;Target=comp113116_c0_seq1 34 32 .
Chr2	stalkie_big_nohaplotig	exon	127947168	127947379	100	+	.	Parent=comp113116_c0_seq1.mrna1;Target=comp113116_c0_seq1 246 35 .
Chr2	stalkie_big_nohaplotig	CDS	127947168	127947247	.	+	1	Parent=comp113116_c0_seq1.mrna1
Chr2	gffcl	locus	128046073	128046840	.	-	.	ID=RLOC_00021531;geneIDs=comp153775_c0_seq1.path1;transcripts=comp153775_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128046073	128046840	.	-	.	ID=comp153775_c0_seq1.mrna1;geneID=comp153775_c0_seq1.path1;Name=comp153775_c0_seq1;Dir=indeterminatecoverage=97.7;identity=96.4;matches=747;mismatches=19;indels=9;unknowns=0;Target=comp153775_c0_seq1 774 2 .;CDS_Target=comp153775_c0_seq1 362 273 .;locus=RLOC_00021531
Chr2	stalkie_big_nohaplotig	exon	128046073	128046840	96	-	.	Parent=comp153775_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	128046480	128046568	.	-	0	Parent=comp153775_c0_seq1.mrna1
Chr2	gffcl	locus	128053726	128054190	.	+	.	ID=RLOC_00021532;geneIDs=FBgn0000253.15.path1;transcripts=FBgn0000253.15.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128053726	128054190	.	+	.	ID=FBgn0000253.15.mrna1;geneID=FBgn0000253.15.path1;Name=FBgn0000253.15;Dir=indeterminatecoverage=100.0;identity=98.7;matches=459;mismatches=6;indels=0;unknowns=0;Target=FBgn0000253.15 465 1 .;locus=RLOC_00021532
Chr2	stalkie_big_nohaplotig	exon	128053726	128054190	98	+	.	Parent=FBgn0000253.15.mrna1
Chr2	stalkie_big_nohaplotig	CDS	128053726	128054190	.	+	0	Parent=FBgn0000253.15.mrna1
Chr2	gffcl	locus	128098213	128098414	.	+	.	ID=RLOC_00021533;geneIDs=comp135582_c0_seq1.path1;transcripts=comp135582_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128098213	128098414	.	+	.	ID=comp135582_c0_seq1.mrna1;geneID=comp135582_c0_seq1.path1;Name=comp135582_c0_seq1;Dir=indeterminatecoverage=96.7;identity=99.0;matches=200;mismatches=2;indels=0;unknowns=0;Target=comp135582_c0_seq1 209 8 .;CDS_Target=comp135582_c0_seq1 208 8 .;locus=RLOC_00021533
Chr2	stalkie_big_nohaplotig	exon	128098213	128098414	99	+	.	Parent=comp135582_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	128098213	128098413	.	+	0	Parent=comp135582_c0_seq1.mrna1
Chr2	gffcl	locus	128098731	128099590	.	-	.	ID=RLOC_00021534;geneIDs=comp154528_c2_seq1.path1;transcripts=comp154528_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128098731	128099590	.	-	.	ID=comp154528_c2_seq1.mrna1;geneID=comp154528_c2_seq1.path1;Name=comp154528_c2_seq1;Dir=antisensecoverage=99.2;identity=93.3;matches=750;mismatches=42;indels=12;unknowns=0;locus=RLOC_00021534
Chr2	stalkie_big_nohaplotig	exon	128098731	128099200	88	-	.	Parent=comp154528_c2_seq1.mrna1;Target=comp154528_c2_seq1 7 464 -
Chr2	stalkie_big_nohaplotig	exon	128099257	128099590	99	-	.	Parent=comp154528_c2_seq1.mrna1;Target=comp154528_c2_seq1 465 798 -
Chr2	stalkie_big_nohaplotig	CDS	128098733	128099200	.	-	0	Parent=comp154528_c2_seq1.mrna1;Target=comp154528_c2_seq1 9 464 .
Chr2	stalkie_big_nohaplotig	CDS	128099257	128099259	.	-	0	Parent=comp154528_c2_seq1.mrna1;Target=comp154528_c2_seq1 465 467 .
Chr2	gffcl	locus	128101010	128102608	.	-	.	ID=RLOC_00021535;geneIDs=comp157959_c0_seq1.path1;transcripts=comp157959_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128101010	128102608	.	-	.	ID=comp157959_c0_seq1.mrna1;geneID=comp157959_c0_seq1.path1;Name=comp157959_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=1543;mismatches=0;indels=0;unknowns=0;Target=comp157959_c0_seq1 555 728 .;locus=RLOC_00021535
Chr2	stalkie_big_nohaplotig	exon	128101010	128102457	100	-	.	Parent=comp157959_c0_seq1.mrna1;Target=comp157959_c0_seq1 1 1448 -
Chr2	stalkie_big_nohaplotig	exon	128102514	128102608	100	-	.	Parent=comp157959_c0_seq1.mrna1;Target=comp157959_c0_seq1 1449 1543 -
Chr2	stalkie_big_nohaplotig	CDS	128101564	128101737	.	-	0	Parent=comp157959_c0_seq1.mrna1
Chr2	gffcl	locus	128129613	128132943	.	-	.	ID=RLOC_00021536;geneIDs=comp151194_c0_seq1.path1;transcripts=comp151194_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128129613	128132943	.	-	.	ID=comp151194_c0_seq1.mrna1;geneID=comp151194_c0_seq1.path1;Name=comp151194_c0_seq1;Dir=sensecoverage=91.5;identity=96.6;matches=537;mismatches=4;indels=15;unknowns=0;locus=RLOC_00021536
Chr2	stalkie_big_nohaplotig	exon	128129613	128129794	90	-	.	Parent=comp151194_c0_seq1.mrna1;Target=comp151194_c0_seq1 405 571 +
Chr2	stalkie_big_nohaplotig	exon	128132514	128132801	99	-	.	Parent=comp151194_c0_seq1.mrna1;Target=comp151194_c0_seq1 117 404 +
Chr2	stalkie_big_nohaplotig	exon	128132858	128132943	100	-	.	Parent=comp151194_c0_seq1.mrna1;Target=comp151194_c0_seq1 31 116 +
Chr2	stalkie_big_nohaplotig	CDS	128129741	128129794	.	-	0	Parent=comp151194_c0_seq1.mrna1;Target=comp151194_c0_seq1 405 443 +
Chr2	stalkie_big_nohaplotig	CDS	128132514	128132801	.	-	0	Parent=comp151194_c0_seq1.mrna1;Target=comp151194_c0_seq1 117 404 +
Chr2	stalkie_big_nohaplotig	CDS	128132858	128132869	.	-	0	Parent=comp151194_c0_seq1.mrna1;Target=comp151194_c0_seq1 105 116 +
Chr2	gffcl	locus	128196243	128196701	.	-	.	ID=RLOC_00021537;geneIDs=FBgn0000253.23.path1;transcripts=FBgn0000253.23.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128196243	128196701	.	-	.	ID=FBgn0000253.23.mrna1;geneID=FBgn0000253.23.path1;Name=FBgn0000253.23;Dir=indeterminatecoverage=100.0;identity=100.0;matches=459;mismatches=0;indels=0;unknowns=0;Target=FBgn0000253.23 459 1 .;locus=RLOC_00021537
Chr2	stalkie_big_nohaplotig	exon	128196243	128196701	100	-	.	Parent=FBgn0000253.23.mrna1
Chr2	stalkie_big_nohaplotig	CDS	128196243	128196701	.	-	0	Parent=FBgn0000253.23.mrna1
Chr2	gffcl	locus	128249528	130080652	.	+	.	ID=RLOC_00021538;geneIDs=FBgn0260962.1.path1;transcripts=FBgn0260962.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128249528	130080652	.	+	.	ID=FBgn0260962.1.mrna1;geneID=FBgn0260962.1.path1;Name=FBgn0260962.1;Dir=indeterminatecoverage=51.8;identity=92.7;matches=1030;mismatches=39;indels=42;unknowns=45;locus=RLOC_00021538
Chr2	stalkie_big_nohaplotig	exon	128249528	128249606	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 79 1 .
Chr2	stalkie_big_nohaplotig	exon	128249877	128250025	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 228 80 .
Chr2	stalkie_big_nohaplotig	exon	128250094	128250356	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 491 229 .
Chr2	stalkie_big_nohaplotig	exon	128250423	128250645	92	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 725 492 .
Chr2	stalkie_big_nohaplotig	exon	129731923	129731926	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 730 727 .
Chr2	stalkie_big_nohaplotig	exon	129732014	129732019	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 736 731 .
Chr2	stalkie_big_nohaplotig	exon	129733614	129733624	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 747 737 .
Chr2	stalkie_big_nohaplotig	exon	129741759	129741769	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 761 751 .
Chr2	stalkie_big_nohaplotig	exon	129746206	129746208	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 771 769 .
Chr2	stalkie_big_nohaplotig	exon	129752965	129752971	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 778 772 .
Chr2	stalkie_big_nohaplotig	exon	129756077	129756083	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 785 779 .
Chr2	stalkie_big_nohaplotig	exon	129759317	129759324	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 793 786 .
Chr2	stalkie_big_nohaplotig	exon	129766034	129766041	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 801 794 .
Chr2	stalkie_big_nohaplotig	exon	129766062	129766070	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 847 839 .
Chr2	stalkie_big_nohaplotig	exon	129775350	129775358	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 863 855 .
Chr2	stalkie_big_nohaplotig	exon	129775401	129775403	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 907 905 .
Chr2	stalkie_big_nohaplotig	exon	129791526	129791532	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 914 908 .
Chr2	stalkie_big_nohaplotig	exon	129791760	129791764	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 919 915 .
Chr2	stalkie_big_nohaplotig	exon	129793849	129793857	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 928 920 .
Chr2	stalkie_big_nohaplotig	exon	129801430	129801435	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 934 929 .
Chr2	stalkie_big_nohaplotig	exon	129802368	129802373	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 940 935 .
Chr2	stalkie_big_nohaplotig	exon	129815190	129815198	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 949 941 .
Chr2	stalkie_big_nohaplotig	exon	129815231	129815240	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 990 981 .
Chr2	stalkie_big_nohaplotig	exon	129830992	129831025	48	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1329 1304 .
Chr2	stalkie_big_nohaplotig	exon	129858597	129858696	52	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1444 1330 .
Chr2	stalkie_big_nohaplotig	exon	129869324	129869326	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1447 1445 .
Chr2	stalkie_big_nohaplotig	exon	129871189	129871190	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1449 1448 .
Chr2	stalkie_big_nohaplotig	exon	129886223	129886234	91	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1461 1450 .
Chr2	stalkie_big_nohaplotig	exon	129906875	129906891	82	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1478 1462 .
Chr2	stalkie_big_nohaplotig	exon	129913797	129913802	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1484 1479 .
Chr2	stalkie_big_nohaplotig	exon	129935295	129935302	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1502 1495 .
Chr2	stalkie_big_nohaplotig	exon	129960132	129960137	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1510 1505 .
Chr2	stalkie_big_nohaplotig	exon	129963677	129963679	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1581 1579 .
Chr2	stalkie_big_nohaplotig	exon	129964043	129964044	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1583 1582 .
Chr2	stalkie_big_nohaplotig	exon	129967389	129967390	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1585 1584 .
Chr2	stalkie_big_nohaplotig	exon	129973523	129973530	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1593 1586 .
Chr2	stalkie_big_nohaplotig	exon	129973545	129973559	73	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1663 1645 .
Chr2	stalkie_big_nohaplotig	exon	130022738	130022745	75	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1671 1664 .
Chr2	stalkie_big_nohaplotig	exon	130030276	130030283	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1679 1672 .
Chr2	stalkie_big_nohaplotig	exon	130038899	130038907	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1705 1697 .
Chr2	stalkie_big_nohaplotig	exon	130059228	130059231	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1723 1720 .
Chr2	stalkie_big_nohaplotig	exon	130080616	130080624	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1732 1724 .
Chr2	stalkie_big_nohaplotig	exon	130080643	130080652	100	+	.	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1786 1777 .
Chr2	stalkie_big_nohaplotig	CDS	128249528	128249606	.	+	0	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 79 1 .
Chr2	stalkie_big_nohaplotig	CDS	128249877	128250025	.	+	2	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 228 80 .
Chr2	stalkie_big_nohaplotig	CDS	128250094	128250356	.	+	0	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 491 229 .
Chr2	stalkie_big_nohaplotig	CDS	128250423	128250645	.	+	1	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 725 492 .
Chr2	stalkie_big_nohaplotig	CDS	129731923	129731926	.	+	0	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 730 727 .
Chr2	stalkie_big_nohaplotig	CDS	129732014	129732019	.	+	2	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 736 731 .
Chr2	stalkie_big_nohaplotig	CDS	129733614	129733624	.	+	2	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 747 737 .
Chr2	stalkie_big_nohaplotig	CDS	129741759	129741769	.	+	0	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 761 751 .
Chr2	stalkie_big_nohaplotig	CDS	129746206	129746208	.	+	1	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 771 769 .
Chr2	stalkie_big_nohaplotig	CDS	129752965	129752971	.	+	1	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 778 772 .
Chr2	stalkie_big_nohaplotig	CDS	129756077	129756083	.	+	0	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 785 779 .
Chr2	stalkie_big_nohaplotig	CDS	129759317	129759324	.	+	2	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 793 786 .
Chr2	stalkie_big_nohaplotig	CDS	129766034	129766041	.	+	0	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 801 794 .
Chr2	stalkie_big_nohaplotig	CDS	129766062	129766070	.	+	1	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 847 839 .
Chr2	stalkie_big_nohaplotig	CDS	129775350	129775358	.	+	1	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 863 855 .
Chr2	stalkie_big_nohaplotig	CDS	129775401	129775403	.	+	1	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 907 905 .
Chr2	stalkie_big_nohaplotig	CDS	129791526	129791532	.	+	1	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 914 908 .
Chr2	stalkie_big_nohaplotig	CDS	129791760	129791764	.	+	0	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 919 915 .
Chr2	stalkie_big_nohaplotig	CDS	129793849	129793857	.	+	1	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 928 920 .
Chr2	stalkie_big_nohaplotig	CDS	129801430	129801435	.	+	1	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 934 929 .
Chr2	stalkie_big_nohaplotig	CDS	129802368	129802373	.	+	1	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 940 935 .
Chr2	stalkie_big_nohaplotig	CDS	129815190	129815198	.	+	1	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 949 941 .
Chr2	stalkie_big_nohaplotig	CDS	129815231	129815240	.	+	1	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 990 981 .
Chr2	stalkie_big_nohaplotig	CDS	129830992	129831025	.	+	0	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1329 1304 .
Chr2	stalkie_big_nohaplotig	CDS	129858597	129858696	.	+	2	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1444 1330 .
Chr2	stalkie_big_nohaplotig	CDS	129869324	129869326	.	+	1	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1447 1445 .
Chr2	stalkie_big_nohaplotig	CDS	129871189	129871190	.	+	1	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1449 1448 .
Chr2	stalkie_big_nohaplotig	CDS	129886223	129886234	.	+	2	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1461 1450 .
Chr2	stalkie_big_nohaplotig	CDS	129906875	129906891	.	+	2	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1478 1462 .
Chr2	stalkie_big_nohaplotig	CDS	129913797	129913802	.	+	0	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1484 1479 .
Chr2	stalkie_big_nohaplotig	CDS	129935295	129935302	.	+	0	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1502 1495 .
Chr2	stalkie_big_nohaplotig	CDS	129960132	129960137	.	+	1	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1510 1505 .
Chr2	stalkie_big_nohaplotig	CDS	129963677	129963679	.	+	1	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1581 1579 .
Chr2	stalkie_big_nohaplotig	CDS	129964043	129964044	.	+	1	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1583 1582 .
Chr2	stalkie_big_nohaplotig	CDS	129967389	129967390	.	+	2	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1585 1584 .
Chr2	stalkie_big_nohaplotig	CDS	129973523	129973530	.	+	0	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1593 1586 .
Chr2	stalkie_big_nohaplotig	CDS	129973545	129973559	.	+	1	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1663 1645 .
Chr2	stalkie_big_nohaplotig	CDS	130022738	130022745	.	+	1	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1671 1664 .
Chr2	stalkie_big_nohaplotig	CDS	130030276	130030283	.	+	2	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1679 1672 .
Chr2	stalkie_big_nohaplotig	CDS	130038899	130038907	.	+	0	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1705 1697 .
Chr2	stalkie_big_nohaplotig	CDS	130059228	130059231	.	+	0	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1723 1720 .
Chr2	stalkie_big_nohaplotig	CDS	130080616	130080624	.	+	2	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1732 1724 .
Chr2	stalkie_big_nohaplotig	CDS	130080643	130080651	.	+	2	Parent=FBgn0260962.1.mrna1;Target=FBgn0260962.1 1785 1777 .
Chr2	gffcl	locus	128255880	128257000	.	+	.	ID=RLOC_00021539;geneIDs=ORF1973.path1;transcripts=ORF1973.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128255880	128257000	.	+	.	ID=ORF1973.mrna1;geneID=ORF1973.path1;Name=ORF1973;Dir=sensecoverage=100.0;identity=99.8;matches=946;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021539
Chr2	stalkie_big_nohaplotig	exon	128255880	128255924	100	+	.	Parent=ORF1973.mrna1;Target=ORF1973 1 45 +
Chr2	stalkie_big_nohaplotig	exon	128256029	128256830	99	+	.	Parent=ORF1973.mrna1;Target=ORF1973 46 847 +
Chr2	stalkie_big_nohaplotig	exon	128256900	128257000	100	+	.	Parent=ORF1973.mrna1;Target=ORF1973 848 948 +
Chr2	stalkie_big_nohaplotig	CDS	128255880	128255924	.	+	0	Parent=ORF1973.mrna1;Target=ORF1973 1 45 +
Chr2	stalkie_big_nohaplotig	CDS	128256029	128256830	.	+	0	Parent=ORF1973.mrna1;Target=ORF1973 46 847 +
Chr2	stalkie_big_nohaplotig	CDS	128256900	128257000	.	+	2	Parent=ORF1973.mrna1;Target=ORF1973 848 948 +
Chr2	gffcl	locus	128274192	128314327	.	+	.	ID=RLOC_00021540;geneIDs=comp144709_c0_seq1.path1;transcripts=comp144709_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128274192	128314327	.	+	.	ID=comp144709_c0_seq1.mrna1;geneID=comp144709_c0_seq1.path1;Name=comp144709_c0_seq1;Dir=antisensecoverage=98.0;identity=99.6;matches=767;mismatches=2;indels=1;unknowns=0;Target=comp144709_c0_seq1 334 438 .;locus=RLOC_00021540
Chr2	stalkie_big_nohaplotig	exon	128274192	128274377	98	+	.	Parent=comp144709_c0_seq1.mrna1;Target=comp144709_c0_seq1 585 769 -
Chr2	stalkie_big_nohaplotig	exon	128313744	128314327	100	+	.	Parent=comp144709_c0_seq1.mrna1;Target=comp144709_c0_seq1 1 584 -
Chr2	stalkie_big_nohaplotig	CDS	128313890	128313994	.	+	0	Parent=comp144709_c0_seq1.mrna1
Chr2	gffcl	locus	128323721	128324158	.	-	.	ID=RLOC_00021541;geneIDs=comp113195_c0_seq1.path1;transcripts=comp113195_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128323721	128324158	.	-	.	ID=comp113195_c0_seq1.mrna1;geneID=comp113195_c0_seq1.path1;Name=comp113195_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=436;mismatches=1;indels=1;unknowns=0;Target=comp113195_c0_seq1 437 1 .;CDS_Target=comp113195_c0_seq1 259 134 .;locus=RLOC_00021541
Chr2	stalkie_big_nohaplotig	exon	128323721	128324158	99	-	.	Parent=comp113195_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	128323899	128324024	.	-	0	Parent=comp113195_c0_seq1.mrna1
Chr2	gffcl	locus	128356279	128359482	.	-	.	ID=RLOC_00021542;geneIDs=FBgn0039554.1.path1;transcripts=FBgn0039554.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128356279	128359482	.	-	.	ID=FBgn0039554.1.mrna1;geneID=FBgn0039554.1.path1;Name=FBgn0039554.1;Dir=sensecoverage=100.0;identity=99.9;matches=2644;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021542
Chr2	stalkie_big_nohaplotig	exon	128356279	128358048	99	-	.	Parent=FBgn0039554.1.mrna1;Target=FBgn0039554.1 877 2646 +
Chr2	stalkie_big_nohaplotig	exon	128358200	128358361	100	-	.	Parent=FBgn0039554.1.mrna1;Target=FBgn0039554.1 715 876 +
Chr2	stalkie_big_nohaplotig	exon	128358626	128358748	100	-	.	Parent=FBgn0039554.1.mrna1;Target=FBgn0039554.1 592 714 +
Chr2	stalkie_big_nohaplotig	exon	128358814	128359087	100	-	.	Parent=FBgn0039554.1.mrna1;Target=FBgn0039554.1 318 591 +
Chr2	stalkie_big_nohaplotig	exon	128359166	128359482	100	-	.	Parent=FBgn0039554.1.mrna1;Target=FBgn0039554.1 1 317 +
Chr2	stalkie_big_nohaplotig	CDS	128356279	128358048	.	-	0	Parent=FBgn0039554.1.mrna1;Target=FBgn0039554.1 877 2646 +
Chr2	stalkie_big_nohaplotig	CDS	128358200	128358361	.	-	0	Parent=FBgn0039554.1.mrna1;Target=FBgn0039554.1 715 876 +
Chr2	stalkie_big_nohaplotig	CDS	128358626	128358748	.	-	0	Parent=FBgn0039554.1.mrna1;Target=FBgn0039554.1 592 714 +
Chr2	stalkie_big_nohaplotig	CDS	128358814	128359087	.	-	1	Parent=FBgn0039554.1.mrna1;Target=FBgn0039554.1 318 591 +
Chr2	stalkie_big_nohaplotig	CDS	128359166	128359482	.	-	0	Parent=FBgn0039554.1.mrna1;Target=FBgn0039554.1 1 317 +
Chr2	gffcl	locus	128363251	128364441	.	+	.	ID=RLOC_00021543;geneIDs=FBgn0039555.1.path1;transcripts=FBgn0039555.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128363251	128364441	.	+	.	ID=FBgn0039555.1.mrna1;geneID=FBgn0039555.1.path1;Name=FBgn0039555.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1191;mismatches=0;indels=0;unknowns=0;Target=FBgn0039555.1 1191 1 .;locus=RLOC_00021543
Chr2	stalkie_big_nohaplotig	exon	128363251	128364441	100	+	.	Parent=FBgn0039555.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	128363251	128364441	.	+	0	Parent=FBgn0039555.1.mrna1
Chr2	gffcl	locus	128364570	128365962	.	-	.	ID=RLOC_00021544;geneIDs=FBgn0053213.1.path1;transcripts=FBgn0053213.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128364570	128365962	.	-	.	ID=FBgn0053213.1.mrna1;geneID=FBgn0053213.1.path1;Name=FBgn0053213.1;Dir=sensecoverage=100.0;identity=100.0;matches=1269;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021544
Chr2	stalkie_big_nohaplotig	exon	128364570	128365724	100	-	.	Parent=FBgn0053213.1.mrna1;Target=FBgn0053213.1 115 1269 +
Chr2	stalkie_big_nohaplotig	exon	128365788	128365825	100	-	.	Parent=FBgn0053213.1.mrna1;Target=FBgn0053213.1 77 114 +
Chr2	stalkie_big_nohaplotig	exon	128365887	128365962	100	-	.	Parent=FBgn0053213.1.mrna1;Target=FBgn0053213.1 1 76 +
Chr2	stalkie_big_nohaplotig	CDS	128364570	128365724	.	-	0	Parent=FBgn0053213.1.mrna1;Target=FBgn0053213.1 115 1269 +
Chr2	stalkie_big_nohaplotig	CDS	128365788	128365825	.	-	2	Parent=FBgn0053213.1.mrna1;Target=FBgn0053213.1 77 114 +
Chr2	stalkie_big_nohaplotig	CDS	128365887	128365962	.	-	0	Parent=FBgn0053213.1.mrna1;Target=FBgn0053213.1 1 76 +
Chr2	gffcl	locus	128367629	128368292	.	+	.	ID=RLOC_00021545;geneIDs=FBgn0032248.2.path1;transcripts=FBgn0032248.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128367629	128368292	.	+	.	ID=FBgn0032248.2.mrna1;geneID=FBgn0032248.2.path1;Name=FBgn0032248.2;Dir=sensecoverage=100.0;identity=100.0;matches=600;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021545
Chr2	stalkie_big_nohaplotig	exon	128367629	128367916	100	+	.	Parent=FBgn0032248.2.mrna1;Target=FBgn0032248.2 1 288 +
Chr2	stalkie_big_nohaplotig	exon	128367981	128368292	100	+	.	Parent=FBgn0032248.2.mrna1;Target=FBgn0032248.2 289 600 +
Chr2	stalkie_big_nohaplotig	CDS	128367629	128367916	.	+	0	Parent=FBgn0032248.2.mrna1;Target=FBgn0032248.2 1 288 +
Chr2	stalkie_big_nohaplotig	CDS	128367981	128368292	.	+	0	Parent=FBgn0032248.2.mrna1;Target=FBgn0032248.2 289 600 +
Chr2	gffcl	locus	128384553	128387357	.	+	.	ID=RLOC_00021547;geneIDs=comp162086_c0_seq1.path1;transcripts=comp162086_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128384553	128387357	.	+	.	ID=comp162086_c0_seq1.mrna1;geneID=comp162086_c0_seq1.path1;Name=comp162086_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=796;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021547
Chr2	stalkie_big_nohaplotig	exon	128384553	128384822	100	+	.	Parent=comp162086_c0_seq1.mrna1;Target=comp162086_c0_seq1 527 796 -
Chr2	stalkie_big_nohaplotig	exon	128384875	128384925	100	+	.	Parent=comp162086_c0_seq1.mrna1;Target=comp162086_c0_seq1 476 526 -
Chr2	stalkie_big_nohaplotig	exon	128384993	128385052	100	+	.	Parent=comp162086_c0_seq1.mrna1;Target=comp162086_c0_seq1 416 475 -
Chr2	stalkie_big_nohaplotig	exon	128385253	128385321	100	+	.	Parent=comp162086_c0_seq1.mrna1;Target=comp162086_c0_seq1 347 415 -
Chr2	stalkie_big_nohaplotig	exon	128385407	128385448	100	+	.	Parent=comp162086_c0_seq1.mrna1;Target=comp162086_c0_seq1 305 346 -
Chr2	stalkie_big_nohaplotig	exon	128386228	128386263	100	+	.	Parent=comp162086_c0_seq1.mrna1;Target=comp162086_c0_seq1 269 304 -
Chr2	stalkie_big_nohaplotig	exon	128386323	128386391	100	+	.	Parent=comp162086_c0_seq1.mrna1;Target=comp162086_c0_seq1 200 268 -
Chr2	stalkie_big_nohaplotig	exon	128386453	128386521	100	+	.	Parent=comp162086_c0_seq1.mrna1;Target=comp162086_c0_seq1 131 199 -
Chr2	stalkie_big_nohaplotig	exon	128387157	128387239	100	+	.	Parent=comp162086_c0_seq1.mrna1;Target=comp162086_c0_seq1 48 130 -
Chr2	stalkie_big_nohaplotig	exon	128387311	128387357	100	+	.	Parent=comp162086_c0_seq1.mrna1;Target=comp162086_c0_seq1 1 47 -
Chr2	stalkie_big_nohaplotig	CDS	128384690	128384822	.	+	0	Parent=comp162086_c0_seq1.mrna1;Target=comp162086_c0_seq1 527 659 .
Chr2	stalkie_big_nohaplotig	CDS	128384875	128384925	.	+	2	Parent=comp162086_c0_seq1.mrna1;Target=comp162086_c0_seq1 476 526 .
Chr2	stalkie_big_nohaplotig	CDS	128384993	128385052	.	+	2	Parent=comp162086_c0_seq1.mrna1;Target=comp162086_c0_seq1 416 475 .
Chr2	stalkie_big_nohaplotig	CDS	128385253	128385321	.	+	2	Parent=comp162086_c0_seq1.mrna1;Target=comp162086_c0_seq1 347 415 .
Chr2	stalkie_big_nohaplotig	CDS	128385407	128385448	.	+	2	Parent=comp162086_c0_seq1.mrna1;Target=comp162086_c0_seq1 305 346 .
Chr2	stalkie_big_nohaplotig	CDS	128386228	128386263	.	+	2	Parent=comp162086_c0_seq1.mrna1;Target=comp162086_c0_seq1 269 304 .
Chr2	stalkie_big_nohaplotig	CDS	128386323	128386391	.	+	2	Parent=comp162086_c0_seq1.mrna1;Target=comp162086_c0_seq1 200 268 .
Chr2	stalkie_big_nohaplotig	CDS	128386453	128386521	.	+	2	Parent=comp162086_c0_seq1.mrna1;Target=comp162086_c0_seq1 131 199 .
Chr2	stalkie_big_nohaplotig	CDS	128387157	128387239	.	+	2	Parent=comp162086_c0_seq1.mrna1;Target=comp162086_c0_seq1 48 130 .
Chr2	stalkie_big_nohaplotig	CDS	128387311	128387352	.	+	0	Parent=comp162086_c0_seq1.mrna1;Target=comp162086_c0_seq1 6 47 .
Chr2	gffcl	locus	128400395	128401578	.	+	.	ID=RLOC_00021548;geneIDs=comp152562_c0_seq1.path1;transcripts=comp152562_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128400395	128401578	.	+	.	ID=comp152562_c0_seq1.mrna1;geneID=comp152562_c0_seq1.path1;Name=comp152562_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=1111;mismatches=1;indels=4;unknowns=0;Target=comp152562_c0_seq1 462 728 .;locus=RLOC_00021548
Chr2	stalkie_big_nohaplotig	exon	128400395	128401130	99	+	.	Parent=comp152562_c0_seq1.mrna1;Target=comp152562_c0_seq1 377 1116 -
Chr2	stalkie_big_nohaplotig	exon	128401203	128401578	100	+	.	Parent=comp152562_c0_seq1.mrna1;Target=comp152562_c0_seq1 1 376 -
Chr2	stalkie_big_nohaplotig	CDS	128400780	128401045	.	+	0	Parent=comp152562_c0_seq1.mrna1
Chr2	gffcl	locus	128425859	128427536	.	-	.	ID=RLOC_00021550;geneIDs=FBgn0032907.1.path1;transcripts=FBgn0032907.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128425859	128427536	.	-	.	ID=FBgn0032907.1.mrna1;geneID=FBgn0032907.1.path1;Name=FBgn0032907.1;Dir=sensecoverage=100.0;identity=100.0;matches=1218;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021550
Chr2	stalkie_big_nohaplotig	exon	128425859	128426347	100	-	.	Parent=FBgn0032907.1.mrna1;Target=FBgn0032907.1 730 1218 +
Chr2	stalkie_big_nohaplotig	exon	128426407	128426577	100	-	.	Parent=FBgn0032907.1.mrna1;Target=FBgn0032907.1 559 729 +
Chr2	stalkie_big_nohaplotig	exon	128426916	128427341	100	-	.	Parent=FBgn0032907.1.mrna1;Target=FBgn0032907.1 133 558 +
Chr2	stalkie_big_nohaplotig	exon	128427405	128427536	100	-	.	Parent=FBgn0032907.1.mrna1;Target=FBgn0032907.1 1 132 +
Chr2	stalkie_big_nohaplotig	CDS	128425859	128426347	.	-	0	Parent=FBgn0032907.1.mrna1;Target=FBgn0032907.1 730 1218 +
Chr2	stalkie_big_nohaplotig	CDS	128426407	128426577	.	-	0	Parent=FBgn0032907.1.mrna1;Target=FBgn0032907.1 559 729 +
Chr2	stalkie_big_nohaplotig	CDS	128426916	128427341	.	-	0	Parent=FBgn0032907.1.mrna1;Target=FBgn0032907.1 133 558 +
Chr2	stalkie_big_nohaplotig	CDS	128427405	128427536	.	-	0	Parent=FBgn0032907.1.mrna1;Target=FBgn0032907.1 1 132 +
Chr2	gffcl	locus	128429688	128431173	.	-	.	ID=RLOC_00021551;geneIDs=FBgn0038053.1.path1;transcripts=FBgn0038053.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128429688	128431173	.	-	.	ID=FBgn0038053.1.mrna1;geneID=FBgn0038053.1.path1;Name=FBgn0038053.1;Dir=sensecoverage=90.9;identity=100.0;matches=1266;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021551
Chr2	stalkie_big_nohaplotig	exon	128429688	128429891	100	-	.	Parent=FBgn0038053.1.mrna1;Target=FBgn0038053.1 1189 1392 +
Chr2	stalkie_big_nohaplotig	exon	128429955	128430388	100	-	.	Parent=FBgn0038053.1.mrna1;Target=FBgn0038053.1 755 1188 +
Chr2	stalkie_big_nohaplotig	exon	128430479	128430936	100	-	.	Parent=FBgn0038053.1.mrna1;Target=FBgn0038053.1 297 754 +
Chr2	stalkie_big_nohaplotig	exon	128431004	128431173	100	-	.	Parent=FBgn0038053.1.mrna1;Target=FBgn0038053.1 127 296 +
Chr2	stalkie_big_nohaplotig	CDS	128429688	128429891	.	-	0	Parent=FBgn0038053.1.mrna1;Target=FBgn0038053.1 1189 1392 +
Chr2	stalkie_big_nohaplotig	CDS	128429955	128430388	.	-	2	Parent=FBgn0038053.1.mrna1;Target=FBgn0038053.1 755 1188 +
Chr2	stalkie_big_nohaplotig	CDS	128430479	128430936	.	-	1	Parent=FBgn0038053.1.mrna1;Target=FBgn0038053.1 297 754 +
Chr2	stalkie_big_nohaplotig	CDS	128431004	128431173	.	-	0	Parent=FBgn0038053.1.mrna1;Target=FBgn0038053.1 127 296 +
Chr2	gffcl	locus	128449352	128450200	.	+	.	ID=RLOC_00021552;geneIDs=comp145003_c0_seq1.path1;transcripts=comp145003_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128449352	128450200	.	+	.	ID=comp145003_c0_seq1.mrna1;geneID=comp145003_c0_seq1.path1;Name=comp145003_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.9;matches=848;mismatches=1;indels=0;unknowns=0;Target=comp145003_c0_seq1 849 1 .;CDS_Target=comp145003_c0_seq1 733 611 .;locus=RLOC_00021552
Chr2	stalkie_big_nohaplotig	exon	128449352	128450200	99	+	.	Parent=comp145003_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	128449962	128450084	.	+	0	Parent=comp145003_c0_seq1.mrna1
Chr2	gffcl	locus	128491796	128496946	.	+	.	ID=RLOC_00021553;geneIDs=FBgn0051121.1.path2;transcripts=FBgn0051121.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	128491796	128496946	.	+	.	ID=FBgn0051121.1.mrna2;geneID=FBgn0051121.1.path2;Name=FBgn0051121.1;Dir=sensecoverage=98.5;identity=100.0;matches=2673;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021553
Chr2	stalkie_big_nohaplotig	exon	128491796	128491929	100	+	.	Parent=FBgn0051121.1.mrna2;Target=FBgn0051121.1 43 176 +
Chr2	stalkie_big_nohaplotig	exon	128493652	128493783	100	+	.	Parent=FBgn0051121.1.mrna2;Target=FBgn0051121.1 177 308 +
Chr2	stalkie_big_nohaplotig	exon	128493844	128494074	100	+	.	Parent=FBgn0051121.1.mrna2;Target=FBgn0051121.1 309 539 +
Chr2	stalkie_big_nohaplotig	exon	128494130	128494254	100	+	.	Parent=FBgn0051121.1.mrna2;Target=FBgn0051121.1 540 664 +
Chr2	stalkie_big_nohaplotig	exon	128494315	128494874	100	+	.	Parent=FBgn0051121.1.mrna2;Target=FBgn0051121.1 665 1224 +
Chr2	stalkie_big_nohaplotig	exon	128494941	128495328	100	+	.	Parent=FBgn0051121.1.mrna2;Target=FBgn0051121.1 1225 1612 +
Chr2	stalkie_big_nohaplotig	exon	128495664	128496133	100	+	.	Parent=FBgn0051121.1.mrna2;Target=FBgn0051121.1 1613 2082 +
Chr2	stalkie_big_nohaplotig	exon	128496194	128496314	100	+	.	Parent=FBgn0051121.1.mrna2;Target=FBgn0051121.1 2083 2203 +
Chr2	stalkie_big_nohaplotig	exon	128496367	128496647	100	+	.	Parent=FBgn0051121.1.mrna2;Target=FBgn0051121.1 2204 2484 +
Chr2	stalkie_big_nohaplotig	exon	128496716	128496946	100	+	.	Parent=FBgn0051121.1.mrna2;Target=FBgn0051121.1 2485 2715 +
Chr2	stalkie_big_nohaplotig	CDS	128491796	128491929	.	+	0	Parent=FBgn0051121.1.mrna2;Target=FBgn0051121.1 43 176 +
Chr2	stalkie_big_nohaplotig	CDS	128493652	128493783	.	+	1	Parent=FBgn0051121.1.mrna2;Target=FBgn0051121.1 177 308 +
Chr2	stalkie_big_nohaplotig	CDS	128493844	128494074	.	+	1	Parent=FBgn0051121.1.mrna2;Target=FBgn0051121.1 309 539 +
Chr2	stalkie_big_nohaplotig	CDS	128494130	128494254	.	+	1	Parent=FBgn0051121.1.mrna2;Target=FBgn0051121.1 540 664 +
Chr2	stalkie_big_nohaplotig	CDS	128494315	128494874	.	+	2	Parent=FBgn0051121.1.mrna2;Target=FBgn0051121.1 665 1224 +
Chr2	stalkie_big_nohaplotig	CDS	128494941	128495328	.	+	0	Parent=FBgn0051121.1.mrna2;Target=FBgn0051121.1 1225 1612 +
Chr2	stalkie_big_nohaplotig	CDS	128495664	128496133	.	+	2	Parent=FBgn0051121.1.mrna2;Target=FBgn0051121.1 1613 2082 +
Chr2	stalkie_big_nohaplotig	CDS	128496194	128496314	.	+	0	Parent=FBgn0051121.1.mrna2;Target=FBgn0051121.1 2083 2203 +
Chr2	stalkie_big_nohaplotig	CDS	128496367	128496647	.	+	2	Parent=FBgn0051121.1.mrna2;Target=FBgn0051121.1 2204 2484 +
Chr2	stalkie_big_nohaplotig	CDS	128496716	128496946	.	+	0	Parent=FBgn0051121.1.mrna2;Target=FBgn0051121.1 2485 2715 +
Chr2	gffcl	locus	128498885	128501014	.	-	.	ID=RLOC_00021554;geneIDs=FBgn0039241.1.path1;transcripts=FBgn0039241.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128498885	128501014	.	-	.	ID=FBgn0039241.1.mrna1;geneID=FBgn0039241.1.path1;Name=FBgn0039241.1;Dir=sensecoverage=100.0;identity=100.0;matches=1794;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021554
Chr2	stalkie_big_nohaplotig	exon	128498885	128499001	100	-	.	Parent=FBgn0039241.1.mrna1;Target=FBgn0039241.1 1678 1794 +
Chr2	stalkie_big_nohaplotig	exon	128499062	128499188	100	-	.	Parent=FBgn0039241.1.mrna1;Target=FBgn0039241.1 1551 1677 +
Chr2	stalkie_big_nohaplotig	exon	128499250	128499683	100	-	.	Parent=FBgn0039241.1.mrna1;Target=FBgn0039241.1 1117 1550 +
Chr2	stalkie_big_nohaplotig	exon	128499751	128500336	100	-	.	Parent=FBgn0039241.1.mrna1;Target=FBgn0039241.1 531 1116 +
Chr2	stalkie_big_nohaplotig	exon	128500424	128500910	100	-	.	Parent=FBgn0039241.1.mrna1;Target=FBgn0039241.1 44 530 +
Chr2	stalkie_big_nohaplotig	exon	128500972	128501014	100	-	.	Parent=FBgn0039241.1.mrna1;Target=FBgn0039241.1 1 43 +
Chr2	stalkie_big_nohaplotig	CDS	128498885	128499001	.	-	0	Parent=FBgn0039241.1.mrna1;Target=FBgn0039241.1 1678 1794 +
Chr2	stalkie_big_nohaplotig	CDS	128499062	128499188	.	-	1	Parent=FBgn0039241.1.mrna1;Target=FBgn0039241.1 1551 1677 +
Chr2	stalkie_big_nohaplotig	CDS	128499250	128499683	.	-	0	Parent=FBgn0039241.1.mrna1;Target=FBgn0039241.1 1117 1550 +
Chr2	stalkie_big_nohaplotig	CDS	128499751	128500336	.	-	1	Parent=FBgn0039241.1.mrna1;Target=FBgn0039241.1 531 1116 +
Chr2	stalkie_big_nohaplotig	CDS	128500424	128500910	.	-	2	Parent=FBgn0039241.1.mrna1;Target=FBgn0039241.1 44 530 +
Chr2	stalkie_big_nohaplotig	CDS	128500972	128501014	.	-	0	Parent=FBgn0039241.1.mrna1;Target=FBgn0039241.1 1 43 +
Chr2	gffcl	locus	128504182	128506179	.	-	.	ID=RLOC_00021555;geneIDs=comp158968_c1_seq1.path1;transcripts=comp158968_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128504182	128506179	.	-	.	ID=comp158968_c1_seq1.mrna1;geneID=comp158968_c1_seq1.path1;Name=comp158968_c1_seq1;Dir=sensecoverage=99.3;identity=99.8;matches=1596;mismatches=2;indels=2;unknowns=0;Target=comp158968_c1_seq1 260 505 +;locus=RLOC_00021555
Chr2	stalkie_big_nohaplotig	exon	128504182	128504429	100	-	.	Parent=comp158968_c1_seq1.mrna1;Target=comp158968_c1_seq1 1365 1612 +
Chr2	stalkie_big_nohaplotig	exon	128504500	128504891	99	-	.	Parent=comp158968_c1_seq1.mrna1;Target=comp158968_c1_seq1 972 1364 +
Chr2	stalkie_big_nohaplotig	exon	128505222	128506179	99	-	.	Parent=comp158968_c1_seq1.mrna1;Target=comp158968_c1_seq1 13 971 +
Chr2	stalkie_big_nohaplotig	CDS	128505688	128505932	.	-	0	Parent=comp158968_c1_seq1.mrna1
Chr2	gffcl	locus	128512411	128513216	.	+	.	ID=RLOC_00021557;geneIDs=FBgn0261108.path1;transcripts=FBgn0261108.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128512411	128513216	.	+	.	ID=FBgn0261108.mrna1;geneID=FBgn0261108.path1;Name=FBgn0261108;Dir=indeterminatecoverage=100.0;identity=99.9;matches=806;mismatches=0;indels=1;unknowns=0;Target=FBgn0261108 807 1 .;locus=RLOC_00021557
Chr2	stalkie_big_nohaplotig	exon	128512411	128513216	99	+	.	Parent=FBgn0261108.mrna1
Chr2	stalkie_big_nohaplotig	CDS	128512411	128513216	.	+	0	Parent=FBgn0261108.mrna1
Chr2	gffcl	locus	128523022	128525015	.	-	.	ID=RLOC_00021558;geneIDs=comp155453_c0_seq1.path1;transcripts=comp155453_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128523022	128525015	.	-	.	ID=comp155453_c0_seq1.mrna1;geneID=comp155453_c0_seq1.path1;Name=comp155453_c0_seq1;Dir=sensecoverage=99.5;identity=99.7;matches=661;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021558
Chr2	stalkie_big_nohaplotig	exon	128523022	128523155	99	-	.	Parent=comp155453_c0_seq1.mrna1;Target=comp155453_c0_seq1 532 665 +
Chr2	stalkie_big_nohaplotig	exon	128523322	128523384	100	-	.	Parent=comp155453_c0_seq1.mrna1;Target=comp155453_c0_seq1 469 531 +
Chr2	stalkie_big_nohaplotig	exon	128523513	128523648	100	-	.	Parent=comp155453_c0_seq1.mrna1;Target=comp155453_c0_seq1 333 468 +
Chr2	stalkie_big_nohaplotig	exon	128524567	128524737	100	-	.	Parent=comp155453_c0_seq1.mrna1;Target=comp155453_c0_seq1 162 332 +
Chr2	stalkie_big_nohaplotig	exon	128524857	128525015	99	-	.	Parent=comp155453_c0_seq1.mrna1;Target=comp155453_c0_seq1 3 161 +
Chr2	stalkie_big_nohaplotig	CDS	128523052	128523155	.	-	2	Parent=comp155453_c0_seq1.mrna1;Target=comp155453_c0_seq1 532 635 +
Chr2	stalkie_big_nohaplotig	CDS	128523322	128523384	.	-	2	Parent=comp155453_c0_seq1.mrna1;Target=comp155453_c0_seq1 469 531 +
Chr2	stalkie_big_nohaplotig	CDS	128523513	128523648	.	-	0	Parent=comp155453_c0_seq1.mrna1;Target=comp155453_c0_seq1 333 468 +
Chr2	stalkie_big_nohaplotig	CDS	128524567	128524722	.	-	0	Parent=comp155453_c0_seq1.mrna1;Target=comp155453_c0_seq1 177 332 +
Chr2	gffcl	locus	128565296	128575328	.	+	.	ID=RLOC_00021560;geneIDs=FBgn0020249.1.path1;transcripts=FBgn0020249.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128565296	128575328	.	+	.	ID=FBgn0020249.1.mrna1;geneID=FBgn0020249.1.path1;Name=FBgn0020249.1;Dir=sensecoverage=100.0;identity=99.4;matches=1065;mismatches=6;indels=0;unknowns=0;locus=RLOC_00021560
Chr2	stalkie_big_nohaplotig	exon	128565296	128565345	100	+	.	Parent=FBgn0020249.1.mrna1;Target=FBgn0020249.1 1 50 +
Chr2	stalkie_big_nohaplotig	exon	128572582	128572701	100	+	.	Parent=FBgn0020249.1.mrna1;Target=FBgn0020249.1 51 170 +
Chr2	stalkie_big_nohaplotig	exon	128572772	128573077	99	+	.	Parent=FBgn0020249.1.mrna1;Target=FBgn0020249.1 171 476 +
Chr2	stalkie_big_nohaplotig	exon	128573671	128573812	98	+	.	Parent=FBgn0020249.1.mrna1;Target=FBgn0020249.1 477 618 +
Chr2	stalkie_big_nohaplotig	exon	128574579	128574695	100	+	.	Parent=FBgn0020249.1.mrna1;Target=FBgn0020249.1 619 735 +
Chr2	stalkie_big_nohaplotig	exon	128574929	128575070	100	+	.	Parent=FBgn0020249.1.mrna1;Target=FBgn0020249.1 736 877 +
Chr2	stalkie_big_nohaplotig	exon	128575135	128575328	98	+	.	Parent=FBgn0020249.1.mrna1;Target=FBgn0020249.1 878 1071 +
Chr2	stalkie_big_nohaplotig	CDS	128565296	128565345	.	+	0	Parent=FBgn0020249.1.mrna1;Target=FBgn0020249.1 1 50 +
Chr2	stalkie_big_nohaplotig	CDS	128572582	128572701	.	+	1	Parent=FBgn0020249.1.mrna1;Target=FBgn0020249.1 51 170 +
Chr2	stalkie_big_nohaplotig	CDS	128572772	128573077	.	+	1	Parent=FBgn0020249.1.mrna1;Target=FBgn0020249.1 171 476 +
Chr2	stalkie_big_nohaplotig	CDS	128573671	128573812	.	+	1	Parent=FBgn0020249.1.mrna1;Target=FBgn0020249.1 477 618 +
Chr2	stalkie_big_nohaplotig	CDS	128574579	128574695	.	+	0	Parent=FBgn0020249.1.mrna1;Target=FBgn0020249.1 619 735 +
Chr2	stalkie_big_nohaplotig	CDS	128574929	128575070	.	+	0	Parent=FBgn0020249.1.mrna1;Target=FBgn0020249.1 736 877 +
Chr2	stalkie_big_nohaplotig	CDS	128575135	128575328	.	+	2	Parent=FBgn0020249.1.mrna1;Target=FBgn0020249.1 878 1071 +
Chr2	gffcl	locus	128576298	128578384	.	-	.	ID=RLOC_00021561;geneIDs=FBgn0016672.1.path1;transcripts=FBgn0016672.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128576298	128578384	.	-	.	ID=FBgn0016672.1.mrna1;geneID=FBgn0016672.1.path1;Name=FBgn0016672.1;Dir=sensecoverage=100.0;identity=99.3;matches=1135;mismatches=8;indels=0;unknowns=0;locus=RLOC_00021561
Chr2	stalkie_big_nohaplotig	exon	128576298	128576923	99	-	.	Parent=FBgn0016672.1.mrna1;Target=FBgn0016672.1 518 1143 +
Chr2	stalkie_big_nohaplotig	exon	128576991	128577261	98	-	.	Parent=FBgn0016672.1.mrna1;Target=FBgn0016672.1 247 517 +
Chr2	stalkie_big_nohaplotig	exon	128578139	128578384	99	-	.	Parent=FBgn0016672.1.mrna1;Target=FBgn0016672.1 1 246 +
Chr2	stalkie_big_nohaplotig	CDS	128576298	128576923	.	-	2	Parent=FBgn0016672.1.mrna1;Target=FBgn0016672.1 518 1143 +
Chr2	stalkie_big_nohaplotig	CDS	128576991	128577261	.	-	0	Parent=FBgn0016672.1.mrna1;Target=FBgn0016672.1 247 517 +
Chr2	stalkie_big_nohaplotig	CDS	128578139	128578384	.	-	0	Parent=FBgn0016672.1.mrna1;Target=FBgn0016672.1 1 246 +
Chr2	gffcl	locus	128599165	128599206	.	-	.	ID=RLOC_00021562;geneIDs=FBgn0051121.1.path1;transcripts=FBgn0051121.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128599165	128599206	.	-	.	ID=FBgn0051121.1.mrna1;geneID=FBgn0051121.1.path1;Name=FBgn0051121.1;Dir=indeterminatecoverage=1.5;identity=100.0;matches=42;mismatches=0;indels=0;unknowns=0;Target=FBgn0051121.1 42 1 .;locus=RLOC_00021562
Chr2	stalkie_big_nohaplotig	exon	128599165	128599206	100	-	.	Parent=FBgn0051121.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	128599165	128599206	.	-	0	Parent=FBgn0051121.1.mrna1
Chr2	gffcl	locus	128601111	128605353	.	+	.	ID=RLOC_00021563;geneIDs=FBgn0039244.1.path1;transcripts=FBgn0039244.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128601111	128605353	.	+	.	ID=FBgn0039244.1.mrna1;geneID=FBgn0039244.1.path1;Name=FBgn0039244.1;Dir=sensecoverage=100.0;identity=99.7;matches=1822;mismatches=5;indels=0;unknowns=0;locus=RLOC_00021563
Chr2	stalkie_big_nohaplotig	exon	128601111	128601185	100	+	.	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 1 75 +
Chr2	stalkie_big_nohaplotig	exon	128602556	128602664	100	+	.	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 76 184 +
Chr2	stalkie_big_nohaplotig	exon	128602765	128602955	100	+	.	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 185 375 +
Chr2	stalkie_big_nohaplotig	exon	128603019	128603163	100	+	.	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 376 520 +
Chr2	stalkie_big_nohaplotig	exon	128603388	128603685	100	+	.	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 521 818 +
Chr2	stalkie_big_nohaplotig	exon	128603780	128603947	100	+	.	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 819 986 +
Chr2	stalkie_big_nohaplotig	exon	128604006	128604123	100	+	.	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 987 1104 +
Chr2	stalkie_big_nohaplotig	exon	128604406	128604499	100	+	.	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 1105 1198 +
Chr2	stalkie_big_nohaplotig	exon	128604555	128604693	100	+	.	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 1199 1337 +
Chr2	stalkie_big_nohaplotig	exon	128604756	128604947	98	+	.	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 1338 1529 +
Chr2	stalkie_big_nohaplotig	exon	128604997	128605183	99	+	.	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 1530 1716 +
Chr2	stalkie_big_nohaplotig	exon	128605243	128605353	99	+	.	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 1717 1827 +
Chr2	stalkie_big_nohaplotig	CDS	128601111	128601185	.	+	0	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 1 75 +
Chr2	stalkie_big_nohaplotig	CDS	128602556	128602664	.	+	0	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 76 184 +
Chr2	stalkie_big_nohaplotig	CDS	128602765	128602955	.	+	2	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 185 375 +
Chr2	stalkie_big_nohaplotig	CDS	128603019	128603163	.	+	0	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 376 520 +
Chr2	stalkie_big_nohaplotig	CDS	128603388	128603685	.	+	2	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 521 818 +
Chr2	stalkie_big_nohaplotig	CDS	128603780	128603947	.	+	1	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 819 986 +
Chr2	stalkie_big_nohaplotig	CDS	128604006	128604123	.	+	1	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 987 1104 +
Chr2	stalkie_big_nohaplotig	CDS	128604406	128604499	.	+	0	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 1105 1198 +
Chr2	stalkie_big_nohaplotig	CDS	128604555	128604693	.	+	2	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 1199 1337 +
Chr2	stalkie_big_nohaplotig	CDS	128604756	128604947	.	+	1	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 1338 1529 +
Chr2	stalkie_big_nohaplotig	CDS	128604997	128605183	.	+	1	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 1530 1716 +
Chr2	stalkie_big_nohaplotig	CDS	128605243	128605353	.	+	0	Parent=FBgn0039244.1.mrna1;Target=FBgn0039244.1 1717 1827 +
Chr2	gffcl	locus	128607494	128607932	.	-	.	ID=RLOC_00021564;geneIDs=comp143926_c0_seq1.path1;transcripts=comp143926_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128607494	128607932	.	-	.	ID=comp143926_c0_seq1.mrna1;geneID=comp143926_c0_seq1.path1;Name=comp143926_c0_seq1;Dir=indeterminatecoverage=99.5;identity=100.0;matches=439;mismatches=0;indels=0;unknowns=0;Target=comp143926_c0_seq1 439 1 .;CDS_Target=comp143926_c0_seq1 75 1 .;locus=RLOC_00021564
Chr2	stalkie_big_nohaplotig	exon	128607494	128607932	100	-	.	Parent=comp143926_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	128607858	128607932	.	-	0	Parent=comp143926_c0_seq1.mrna1
Chr2	gffcl	locus	128608306	128614954	.	-	.	ID=RLOC_00021565;geneIDs=FBgn0040601.1.path1;transcripts=FBgn0040601.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128608306	128614954	.	-	.	ID=FBgn0040601.1.mrna1;geneID=FBgn0040601.1.path1;Name=FBgn0040601.1;Dir=sensecoverage=98.4;identity=99.7;matches=2633;mismatches=6;indels=3;unknowns=0;locus=RLOC_00021565
Chr2	stalkie_big_nohaplotig	exon	128608306	128610245	99	-	.	Parent=FBgn0040601.1.mrna1;Target=FBgn0040601.1 743 2685 +
Chr2	stalkie_big_nohaplotig	exon	128610340	128610591	100	-	.	Parent=FBgn0040601.1.mrna1;Target=FBgn0040601.1 491 742 +
Chr2	stalkie_big_nohaplotig	exon	128610715	128610931	100	-	.	Parent=FBgn0040601.1.mrna1;Target=FBgn0040601.1 274 490 +
Chr2	stalkie_big_nohaplotig	exon	128614725	128614954	100	-	.	Parent=FBgn0040601.1.mrna1;Target=FBgn0040601.1 44 273 +
Chr2	stalkie_big_nohaplotig	CDS	128608306	128610245	.	-	2	Parent=FBgn0040601.1.mrna1;Target=FBgn0040601.1 743 2685 +
Chr2	stalkie_big_nohaplotig	CDS	128610340	128610591	.	-	2	Parent=FBgn0040601.1.mrna1;Target=FBgn0040601.1 491 742 +
Chr2	stalkie_big_nohaplotig	CDS	128610715	128610931	.	-	0	Parent=FBgn0040601.1.mrna1;Target=FBgn0040601.1 274 490 +
Chr2	stalkie_big_nohaplotig	CDS	128614725	128614952	.	-	0	Parent=FBgn0040601.1.mrna1;Target=FBgn0040601.1 46 273 +
Chr2	gffcl	locus	128700888	128706009	.	-	.	ID=RLOC_00021568;geneIDs=comp156562_c0_seq1.path1;transcripts=comp156562_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128700888	128706009	.	-	.	ID=comp156562_c0_seq1.mrna1;geneID=comp156562_c0_seq1.path1;Name=comp156562_c0_seq1;Dir=antisensecoverage=80.1;identity=96.6;matches=589;mismatches=21;indels=0;unknowns=0;locus=RLOC_00021568
Chr2	stalkie_big_nohaplotig	exon	128700888	128700978	85	-	.	Parent=comp156562_c0_seq1.mrna1;Target=comp156562_c0_seq1 115 205 -
Chr2	stalkie_big_nohaplotig	exon	128701037	128701196	98	-	.	Parent=comp156562_c0_seq1.mrna1;Target=comp156562_c0_seq1 206 365 -
Chr2	stalkie_big_nohaplotig	exon	128701267	128701559	97	-	.	Parent=comp156562_c0_seq1.mrna1;Target=comp156562_c0_seq1 366 658 -
Chr2	stalkie_big_nohaplotig	exon	128705944	128706009	100	-	.	Parent=comp156562_c0_seq1.mrna1;Target=comp156562_c0_seq1 659 724 -
Chr2	stalkie_big_nohaplotig	CDS	128700890	128700978	.	-	2	Parent=comp156562_c0_seq1.mrna1;Target=comp156562_c0_seq1 117 205 .
Chr2	stalkie_big_nohaplotig	CDS	128701037	128701196	.	-	0	Parent=comp156562_c0_seq1.mrna1;Target=comp156562_c0_seq1 206 365 .
Chr2	stalkie_big_nohaplotig	CDS	128701267	128701559	.	-	2	Parent=comp156562_c0_seq1.mrna1;Target=comp156562_c0_seq1 366 658 .
Chr2	stalkie_big_nohaplotig	CDS	128705944	128706007	.	-	0	Parent=comp156562_c0_seq1.mrna1;Target=comp156562_c0_seq1 659 722 .
Chr2	gffcl	locus	128725037	128725959	.	-	.	ID=RLOC_00021570;geneIDs=comp150419_c1_seq1.path1;transcripts=comp150419_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128725037	128725959	.	-	.	ID=comp150419_c1_seq1.mrna1;geneID=comp150419_c1_seq1.path1;Name=comp150419_c1_seq1;Dir=sensecoverage=99.8;identity=95.6;matches=852;mismatches=8;indels=31;unknowns=0;Target=comp150419_c1_seq1 293 634 +;locus=RLOC_00021570
Chr2	stalkie_big_nohaplotig	exon	128725037	128725612	93	-	.	Parent=comp150419_c1_seq1.mrna1;Target=comp150419_c1_seq1 286 892 +
Chr2	stalkie_big_nohaplotig	exon	128725676	128725959	100	-	.	Parent=comp150419_c1_seq1.mrna1;Target=comp150419_c1_seq1 2 285 +
Chr2	stalkie_big_nohaplotig	CDS	128725264	128725605	.	-	0	Parent=comp150419_c1_seq1.mrna1
Chr2	gffcl	locus	128865545	128866183	.	-	.	ID=RLOC_00021571;geneIDs=comp131677_c0_seq1.path1;transcripts=comp131677_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128865545	128866183	.	-	.	ID=comp131677_c0_seq1.mrna1;geneID=comp131677_c0_seq1.path1;Name=comp131677_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.8;matches=638;mismatches=1;indels=0;unknowns=0;Target=comp131677_c0_seq1 647 9 .;CDS_Target=comp131677_c0_seq1 343 257 .;locus=RLOC_00021571
Chr2	stalkie_big_nohaplotig	exon	128865545	128866183	99	-	.	Parent=comp131677_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	128865849	128865935	.	-	0	Parent=comp131677_c0_seq1.mrna1
Chr2	gffcl	locus	128866318	128909129	.	.	.	ID=RLOC_00021572;geneIDs=comp127971_c1_seq1.path1,comp152711_c0_seq1.path1;transcripts=comp127971_c1_seq1.mrna1,comp152711_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128866318	128909129	.	-	.	ID=comp127971_c1_seq1.mrna1;geneID=comp127971_c1_seq1.path1;Name=comp127971_c1_seq1;Dir=indeterminatecoverage=62.5;identity=96.9;matches=219;mismatches=6;indels=1;unknowns=0;locus=RLOC_00021572
Chr2	stalkie_big_nohaplotig	exon	128866318	128866475	96	-	.	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 321 165 .
Chr2	stalkie_big_nohaplotig	exon	128867420	128867424	100	-	.	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 164 160 .
Chr2	stalkie_big_nohaplotig	exon	128868642	128868649	100	-	.	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 159 152 .
Chr2	stalkie_big_nohaplotig	exon	128871380	128871391	83	-	.	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 151 140 .
Chr2	stalkie_big_nohaplotig	exon	128875775	128875778	100	-	.	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 139 136 .
Chr2	stalkie_big_nohaplotig	exon	128881735	128881736	100	-	.	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 135 134 .
Chr2	stalkie_big_nohaplotig	exon	128887253	128887257	100	-	.	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 133 129 .
Chr2	stalkie_big_nohaplotig	exon	128887859	128887861	100	-	.	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 128 126 .
Chr2	stalkie_big_nohaplotig	exon	128890470	128890474	100	-	.	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 125 121 .
Chr2	stalkie_big_nohaplotig	exon	128891399	128891404	100	-	.	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 120 115 .
Chr2	stalkie_big_nohaplotig	exon	128898504	128898510	100	-	.	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 114 108 .
Chr2	stalkie_big_nohaplotig	exon	128899872	128899876	100	-	.	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 107 103 .
Chr2	stalkie_big_nohaplotig	exon	128902346	128902348	100	-	.	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 102 100 .
Chr2	stalkie_big_nohaplotig	exon	128909127	128909129	100	-	.	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 99 97 .
Chr2	stalkie_big_nohaplotig	CDS	128866429	128866475	.	-	1	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 210 165 .
Chr2	stalkie_big_nohaplotig	CDS	128867420	128867424	.	-	0	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 164 160 .
Chr2	stalkie_big_nohaplotig	CDS	128868642	128868649	.	-	2	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 159 152 .
Chr2	stalkie_big_nohaplotig	CDS	128871380	128871391	.	-	2	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 151 140 .
Chr2	stalkie_big_nohaplotig	CDS	128875775	128875778	.	-	0	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 139 136 .
Chr2	stalkie_big_nohaplotig	CDS	128881735	128881736	.	-	2	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 135 134 .
Chr2	stalkie_big_nohaplotig	CDS	128887253	128887257	.	-	1	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 133 129 .
Chr2	stalkie_big_nohaplotig	CDS	128887859	128887861	.	-	1	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 128 126 .
Chr2	stalkie_big_nohaplotig	CDS	128890470	128890474	.	-	0	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 125 121 .
Chr2	stalkie_big_nohaplotig	CDS	128891399	128891404	.	-	0	Parent=comp127971_c1_seq1.mrna1;Target=comp127971_c1_seq1 120 115 .
Chr2	stalkie_big_nohaplotig	mRNA	128866444	128867388	.	+	.	ID=comp152711_c0_seq1.mrna1;geneID=comp152711_c0_seq1.path1;Name=comp152711_c0_seq1;Dir=indeterminatecoverage=98.0;identity=99.9;matches=944;mismatches=1;indels=0;unknowns=0;Target=comp152711_c0_seq1 963 19 .;CDS_Target=comp152711_c0_seq1 577 491 .;locus=RLOC_00021572
Chr2	stalkie_big_nohaplotig	exon	128866444	128867388	99	+	.	Parent=comp152711_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	128866916	128867002	.	+	0	Parent=comp152711_c0_seq1.mrna1
Chr2	gffcl	locus	128870221	128871368	.	-	.	ID=RLOC_00021573;geneIDs=comp71496_c0_seq1.path1,comp151778_c0_seq1.path1;transcripts=comp151778_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128870610	128871368	.	-	.	ID=comp151778_c0_seq1.mrna1;geneID=comp151778_c0_seq1.path1;Name=comp151778_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=759;mismatches=0;indels=1;unknowns=0;Target=comp151778_c0_seq1 760 1 .;CDS_Target=comp151778_c0_seq1 451 368 .;locus=RLOC_00021573
Chr2	stalkie_big_nohaplotig	exon	128870610	128871368	99	-	.	Parent=comp151778_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	128870919	128871002	.	-	0	Parent=comp151778_c0_seq1.mrna1
Chr2	gffcl	locus	128879180	128880334	.	-	.	ID=RLOC_00021574;geneIDs=comp160146_c0_seq1.path1;transcripts=comp160146_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128879180	128880334	.	-	.	ID=comp160146_c0_seq1.mrna1;geneID=comp160146_c0_seq1.path1;Name=comp160146_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.3;matches=1153;mismatches=2;indels=6;unknowns=0;Target=comp160146_c0_seq1 1180 20 .;CDS_Target=comp160146_c0_seq1 160 62 .;locus=RLOC_00021574
Chr2	stalkie_big_nohaplotig	exon	128879180	128880334	99	-	.	Parent=comp160146_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	128880196	128880294	.	-	0	Parent=comp160146_c0_seq1.mrna1
Chr2	gffcl	locus	128883557	128883874	.	-	.	ID=RLOC_00021575;geneIDs=comp69762_c0_seq1.path1;transcripts=comp69762_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128883557	128883874	.	-	.	ID=comp69762_c0_seq1.mrna1;geneID=comp69762_c0_seq1.path1;Name=comp69762_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=318;mismatches=0;indels=0;unknowns=0;Target=comp69762_c0_seq1 318 1 .;CDS_Target=comp69762_c0_seq1 186 1 .;locus=RLOC_00021575
Chr2	stalkie_big_nohaplotig	exon	128883557	128883874	100	-	.	Parent=comp69762_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	128883689	128883874	.	-	0	Parent=comp69762_c0_seq1.mrna1
Chr2	gffcl	locus	128883987	128884738	.	-	.	ID=RLOC_00021576;geneIDs=comp154186_c0_seq1.path1;transcripts=comp154186_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128883987	128884738	.	-	.	ID=comp154186_c0_seq1.mrna1;geneID=comp154186_c0_seq1.path1;Name=comp154186_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=748;mismatches=4;indels=0;unknowns=0;Target=comp154186_c0_seq1 752 1 .;CDS_Target=comp154186_c0_seq1 458 336 .;locus=RLOC_00021576
Chr2	stalkie_big_nohaplotig	exon	128883987	128884738	99	-	.	Parent=comp154186_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	128884281	128884403	.	-	0	Parent=comp154186_c0_seq1.mrna1
Chr2	gffcl	locus	128886485	128902567	.	-	.	ID=RLOC_00021577;geneIDs=FBgn0262869.path1;transcripts=FBgn0262869.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	128886485	128902567	.	-	.	ID=FBgn0262869.mrna1;geneID=FBgn0262869.path1;Name=FBgn0262869;Dir=sensecoverage=100.0;identity=99.8;matches=1383;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021577
Chr2	stalkie_big_nohaplotig	exon	128886485	128886736	100	-	.	Parent=FBgn0262869.mrna1;Target=FBgn0262869 1135 1386 +
Chr2	stalkie_big_nohaplotig	exon	128886873	128886983	100	-	.	Parent=FBgn0262869.mrna1;Target=FBgn0262869 1024 1134 +
Chr2	stalkie_big_nohaplotig	exon	128887102	128887229	100	-	.	Parent=FBgn0262869.mrna1;Target=FBgn0262869 896 1023 +
Chr2	stalkie_big_nohaplotig	exon	128889316	128889538	100	-	.	Parent=FBgn0262869.mrna1;Target=FBgn0262869 673 895 +
Chr2	stalkie_big_nohaplotig	exon	128895051	128895115	100	-	.	Parent=FBgn0262869.mrna1;Target=FBgn0262869 608 672 +
Chr2	stalkie_big_nohaplotig	exon	128900670	128901120	99	-	.	Parent=FBgn0262869.mrna1;Target=FBgn0262869 157 607 +
Chr2	stalkie_big_nohaplotig	exon	128902412	128902567	98	-	.	Parent=FBgn0262869.mrna1;Target=FBgn0262869 1 156 +
Chr2	stalkie_big_nohaplotig	CDS	128886485	128886736	.	-	0	Parent=FBgn0262869.mrna1;Target=FBgn0262869 1135 1386 +
Chr2	stalkie_big_nohaplotig	CDS	128886873	128886983	.	-	0	Parent=FBgn0262869.mrna1;Target=FBgn0262869 1024 1134 +
Chr2	stalkie_big_nohaplotig	CDS	128887102	128887229	.	-	2	Parent=FBgn0262869.mrna1;Target=FBgn0262869 896 1023 +
Chr2	stalkie_big_nohaplotig	CDS	128889316	128889538	.	-	0	Parent=FBgn0262869.mrna1;Target=FBgn0262869 673 895 +
Chr2	stalkie_big_nohaplotig	CDS	128895051	128895115	.	-	2	Parent=FBgn0262869.mrna1;Target=FBgn0262869 608 672 +
Chr2	stalkie_big_nohaplotig	CDS	128900670	128901120	.	-	0	Parent=FBgn0262869.mrna1;Target=FBgn0262869 157 607 +
Chr2	stalkie_big_nohaplotig	CDS	128902412	128902567	.	-	0	Parent=FBgn0262869.mrna1;Target=FBgn0262869 1 156 +
Chr2	stalkie_big_nohaplotig	mRNA	129066831	129069562	.	-	.	ID=FBgn0038788.1.mrna1;geneID=FBgn0038788.1.path1;Name=FBgn0038788.1;Dir=sensecoverage=99.1;identity=100.0;matches=1392;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021578
Chr2	stalkie_big_nohaplotig	exon	129066831	129067864	100	-	.	Parent=FBgn0038788.1.mrna1;Target=FBgn0038788.1 359 1392 +
Chr2	stalkie_big_nohaplotig	exon	129067924	129068020	100	-	.	Parent=FBgn0038788.1.mrna1;Target=FBgn0038788.1 262 358 +
Chr2	stalkie_big_nohaplotig	exon	129068087	129068184	100	-	.	Parent=FBgn0038788.1.mrna1;Target=FBgn0038788.1 164 261 +
Chr2	stalkie_big_nohaplotig	exon	129069400	129069562	100	-	.	Parent=FBgn0038788.1.mrna1;Target=FBgn0038788.1 1 163 +
Chr2	stalkie_big_nohaplotig	CDS	129066831	129067864	.	-	2	Parent=FBgn0038788.1.mrna1;Target=FBgn0038788.1 359 1392 +
Chr2	stalkie_big_nohaplotig	CDS	129067924	129068020	.	-	0	Parent=FBgn0038788.1.mrna1;Target=FBgn0038788.1 262 358 +
Chr2	stalkie_big_nohaplotig	CDS	129068087	129068184	.	-	2	Parent=FBgn0038788.1.mrna1;Target=FBgn0038788.1 164 261 +
Chr2	stalkie_big_nohaplotig	CDS	129069400	129069562	.	-	0	Parent=FBgn0038788.1.mrna1;Target=FBgn0038788.1 1 163 +
Chr2	stalkie_big_nohaplotig	mRNA	129077138	129077703	.	+	.	ID=comp149434_c0_seq1.mrna1;geneID=comp149434_c0_seq1.path1;Name=comp149434_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.8;matches=565;mismatches=1;indels=0;unknowns=0;Target=comp149434_c0_seq1 567 2 .;CDS_Target=comp149434_c0_seq1 433 116 .;locus=RLOC_00021578
Chr2	stalkie_big_nohaplotig	exon	129077138	129077703	99	+	.	Parent=comp149434_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129077252	129077569	.	+	0	Parent=comp149434_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129086024	129087903	.	-	.	ID=comp155524_c0_seq1.mrna1;geneID=comp155524_c0_seq1.path1;Name=comp155524_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.3;matches=1867;mismatches=7;indels=6;unknowns=0;Target=comp155524_c0_seq1 1874 1 .;CDS_Target=comp155524_c0_seq1 737 180 .;locus=RLOC_00021578
Chr2	stalkie_big_nohaplotig	exon	129086024	129087903	99	-	.	Parent=comp155524_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129087161	129087724	.	-	0	Parent=comp155524_c0_seq1.mrna1
Chr2	gffcl	locus	129060891	129061442	.	+	.	ID=RLOC_00021579;geneIDs=comp146114_c0_seq1.path1;transcripts=comp146114_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129060891	129061442	.	+	.	ID=comp146114_c0_seq1.mrna1;geneID=comp146114_c0_seq1.path1;Name=comp146114_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=430;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021579
Chr2	stalkie_big_nohaplotig	exon	129060891	129061011	100	+	.	Parent=comp146114_c0_seq1.mrna1;Target=comp146114_c0_seq1 1 121 +
Chr2	stalkie_big_nohaplotig	exon	129061068	129061154	100	+	.	Parent=comp146114_c0_seq1.mrna1;Target=comp146114_c0_seq1 122 208 +
Chr2	stalkie_big_nohaplotig	exon	129061221	129061442	100	+	.	Parent=comp146114_c0_seq1.mrna1;Target=comp146114_c0_seq1 209 430 +
Chr2	stalkie_big_nohaplotig	CDS	129060978	129061011	.	+	0	Parent=comp146114_c0_seq1.mrna1;Target=comp146114_c0_seq1 88 121 +
Chr2	stalkie_big_nohaplotig	CDS	129061068	129061154	.	+	2	Parent=comp146114_c0_seq1.mrna1;Target=comp146114_c0_seq1 122 208 +
Chr2	stalkie_big_nohaplotig	CDS	129061221	129061381	.	+	2	Parent=comp146114_c0_seq1.mrna1;Target=comp146114_c0_seq1 209 369 +
Chr2	gffcl	locus	129072728	129074398	.	+	.	ID=RLOC_00021580;geneIDs=FBgn0038787.1.path1;transcripts=FBgn0038787.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129072728	129074398	.	+	.	ID=FBgn0038787.1.mrna1;geneID=FBgn0038787.1.path1;Name=FBgn0038787.1;Dir=sensecoverage=100.0;identity=100.0;matches=1509;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021580
Chr2	stalkie_big_nohaplotig	exon	129072728	129073313	100	+	.	Parent=FBgn0038787.1.mrna1;Target=FBgn0038787.1 1 586 +
Chr2	stalkie_big_nohaplotig	exon	129073387	129073788	100	+	.	Parent=FBgn0038787.1.mrna1;Target=FBgn0038787.1 587 988 +
Chr2	stalkie_big_nohaplotig	exon	129073878	129074398	100	+	.	Parent=FBgn0038787.1.mrna1;Target=FBgn0038787.1 989 1509 +
Chr2	stalkie_big_nohaplotig	CDS	129072728	129073313	.	+	0	Parent=FBgn0038787.1.mrna1;Target=FBgn0038787.1 1 586 +
Chr2	stalkie_big_nohaplotig	CDS	129073387	129073788	.	+	2	Parent=FBgn0038787.1.mrna1;Target=FBgn0038787.1 587 988 +
Chr2	stalkie_big_nohaplotig	CDS	129073878	129074398	.	+	2	Parent=FBgn0038787.1.mrna1;Target=FBgn0038787.1 989 1509 +
Chr2	gffcl	locus	129074558	129076347	.	-	.	ID=RLOC_00021581;geneIDs=comp159955_c3_seq1.path1;transcripts=comp159955_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129074558	129076347	.	-	.	ID=comp159955_c3_seq1.mrna1;geneID=comp159955_c3_seq1.path1;Name=comp159955_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1790;mismatches=0;indels=10;unknowns=0;Target=comp159955_c3_seq1 1800 1 .;CDS_Target=comp159955_c3_seq1 490 272 .;locus=RLOC_00021581
Chr2	stalkie_big_nohaplotig	exon	129074558	129076347	99	-	.	Parent=comp159955_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129075858	129076076	.	-	0	Parent=comp159955_c3_seq1.mrna1
Chr2	gffcl	locus	129103290	129103805	.	-	.	ID=RLOC_00021582;geneIDs=comp116095_c0_seq1.path1;transcripts=comp116095_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129103290	129103805	.	-	.	ID=comp116095_c0_seq1.mrna1;geneID=comp116095_c0_seq1.path1;Name=comp116095_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=516;mismatches=0;indels=0;unknowns=0;Target=comp116095_c0_seq1 516 1 .;CDS_Target=comp116095_c0_seq1 374 273 .;locus=RLOC_00021582
Chr2	stalkie_big_nohaplotig	exon	129103290	129103805	100	-	.	Parent=comp116095_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129103432	129103533	.	-	0	Parent=comp116095_c0_seq1.mrna1
Chr2	gffcl	locus	129136272	129137005	.	-	.	ID=RLOC_00021583;geneIDs=FBgn0037843.1.path1;transcripts=FBgn0037843.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129136272	129137005	.	-	.	ID=FBgn0037843.1.mrna1;geneID=FBgn0037843.1.path1;Name=FBgn0037843.1;Dir=sensecoverage=100.0;identity=100.0;matches=678;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021583
Chr2	stalkie_big_nohaplotig	exon	129136272	129136742	100	-	.	Parent=FBgn0037843.1.mrna1;Target=FBgn0037843.1 208 678 +
Chr2	stalkie_big_nohaplotig	exon	129136799	129137005	100	-	.	Parent=FBgn0037843.1.mrna1;Target=FBgn0037843.1 1 207 +
Chr2	stalkie_big_nohaplotig	CDS	129136272	129136742	.	-	0	Parent=FBgn0037843.1.mrna1;Target=FBgn0037843.1 208 678 +
Chr2	stalkie_big_nohaplotig	CDS	129136799	129137005	.	-	0	Parent=FBgn0037843.1.mrna1;Target=FBgn0037843.1 1 207 +
Chr2	gffcl	locus	129147300	129148985	.	+	.	ID=RLOC_00021584;geneIDs=FBgn0038476.1.path1;transcripts=FBgn0038476.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129147300	129148985	.	+	.	ID=FBgn0038476.1.mrna1;geneID=FBgn0038476.1.path1;Name=FBgn0038476.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1681;mismatches=5;indels=0;unknowns=0;Target=FBgn0038476.1 1686 1 .;locus=RLOC_00021584
Chr2	stalkie_big_nohaplotig	exon	129147300	129148985	99	+	.	Parent=FBgn0038476.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129147300	129148985	.	+	0	Parent=FBgn0038476.1.mrna1
Chr2	gffcl	locus	129152720	129157355	.	+	.	ID=RLOC_00021585;geneIDs=FBgn0260399.1.path1;transcripts=FBgn0260399.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129152720	129157355	.	+	.	ID=FBgn0260399.1.mrna1;geneID=FBgn0260399.1.path1;Name=FBgn0260399.1;Dir=sensecoverage=100.0;identity=99.3;matches=2469;mismatches=18;indels=0;unknowns=0;locus=RLOC_00021585
Chr2	stalkie_big_nohaplotig	exon	129152720	129152938	99	+	.	Parent=FBgn0260399.1.mrna1;Target=FBgn0260399.1 1 219 +
Chr2	stalkie_big_nohaplotig	exon	129153365	129153842	99	+	.	Parent=FBgn0260399.1.mrna1;Target=FBgn0260399.1 220 697 +
Chr2	stalkie_big_nohaplotig	exon	129153914	129154072	100	+	.	Parent=FBgn0260399.1.mrna1;Target=FBgn0260399.1 698 856 +
Chr2	stalkie_big_nohaplotig	exon	129154129	129154274	99	+	.	Parent=FBgn0260399.1.mrna1;Target=FBgn0260399.1 857 1002 +
Chr2	stalkie_big_nohaplotig	exon	129154333	129154494	99	+	.	Parent=FBgn0260399.1.mrna1;Target=FBgn0260399.1 1003 1164 +
Chr2	stalkie_big_nohaplotig	exon	129154565	129154684	99	+	.	Parent=FBgn0260399.1.mrna1;Target=FBgn0260399.1 1165 1284 +
Chr2	stalkie_big_nohaplotig	exon	129154870	129155024	98	+	.	Parent=FBgn0260399.1.mrna1;Target=FBgn0260399.1 1285 1439 +
Chr2	stalkie_big_nohaplotig	exon	129156119	129156214	100	+	.	Parent=FBgn0260399.1.mrna1;Target=FBgn0260399.1 1440 1535 +
Chr2	stalkie_big_nohaplotig	exon	129156275	129156838	99	+	.	Parent=FBgn0260399.1.mrna1;Target=FBgn0260399.1 1536 2099 +
Chr2	stalkie_big_nohaplotig	exon	129156904	129157028	97	+	.	Parent=FBgn0260399.1.mrna1;Target=FBgn0260399.1 2100 2224 +
Chr2	stalkie_big_nohaplotig	exon	129157093	129157355	98	+	.	Parent=FBgn0260399.1.mrna1;Target=FBgn0260399.1 2225 2487 +
Chr2	stalkie_big_nohaplotig	CDS	129152795	129152938	.	+	0	Parent=FBgn0260399.1.mrna1;Target=FBgn0260399.1 76 219 +
Chr2	stalkie_big_nohaplotig	CDS	129153365	129153842	.	+	0	Parent=FBgn0260399.1.mrna1;Target=FBgn0260399.1 220 697 +
Chr2	stalkie_big_nohaplotig	CDS	129153914	129154072	.	+	2	Parent=FBgn0260399.1.mrna1;Target=FBgn0260399.1 698 856 +
Chr2	stalkie_big_nohaplotig	CDS	129154129	129154274	.	+	2	Parent=FBgn0260399.1.mrna1;Target=FBgn0260399.1 857 1002 +
Chr2	stalkie_big_nohaplotig	CDS	129154333	129154494	.	+	0	Parent=FBgn0260399.1.mrna1;Target=FBgn0260399.1 1003 1164 +
Chr2	stalkie_big_nohaplotig	CDS	129154565	129154684	.	+	0	Parent=FBgn0260399.1.mrna1;Target=FBgn0260399.1 1165 1284 +
Chr2	stalkie_big_nohaplotig	CDS	129154870	129155024	.	+	0	Parent=FBgn0260399.1.mrna1;Target=FBgn0260399.1 1285 1439 +
Chr2	stalkie_big_nohaplotig	CDS	129156119	129156214	.	+	1	Parent=FBgn0260399.1.mrna1;Target=FBgn0260399.1 1440 1535 +
Chr2	stalkie_big_nohaplotig	CDS	129156275	129156838	.	+	1	Parent=FBgn0260399.1.mrna1;Target=FBgn0260399.1 1536 2099 +
Chr2	stalkie_big_nohaplotig	CDS	129156904	129157028	.	+	1	Parent=FBgn0260399.1.mrna1;Target=FBgn0260399.1 2100 2224 +
Chr2	stalkie_big_nohaplotig	CDS	129157093	129157355	.	+	2	Parent=FBgn0260399.1.mrna1;Target=FBgn0260399.1 2225 2487 +
Chr2	gffcl	locus	129159565	129178567	.	-	.	ID=RLOC_00021586;geneIDs=FBgn0037796.1.path1;transcripts=FBgn0037796.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129159565	129178567	.	-	.	ID=FBgn0037796.1.mrna1;geneID=FBgn0037796.1.path1;Name=FBgn0037796.1;Dir=sensecoverage=83.9;identity=100.0;matches=1138;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021586
Chr2	stalkie_big_nohaplotig	exon	129159565	129159715	100	-	.	Parent=FBgn0037796.1.mrna1;Target=FBgn0037796.1 1105 1255 +
Chr2	stalkie_big_nohaplotig	exon	129159882	129160027	100	-	.	Parent=FBgn0037796.1.mrna1;Target=FBgn0037796.1 959 1104 +
Chr2	stalkie_big_nohaplotig	exon	129160109	129160297	100	-	.	Parent=FBgn0037796.1.mrna1;Target=FBgn0037796.1 770 958 +
Chr2	stalkie_big_nohaplotig	exon	129161269	129161366	100	-	.	Parent=FBgn0037796.1.mrna1;Target=FBgn0037796.1 672 769 +
Chr2	stalkie_big_nohaplotig	exon	129161499	129161577	100	-	.	Parent=FBgn0037796.1.mrna1;Target=FBgn0037796.1 593 671 +
Chr2	stalkie_big_nohaplotig	exon	129161702	129161811	100	-	.	Parent=FBgn0037796.1.mrna1;Target=FBgn0037796.1 483 592 +
Chr2	stalkie_big_nohaplotig	exon	129167080	129167186	100	-	.	Parent=FBgn0037796.1.mrna1;Target=FBgn0037796.1 376 482 +
Chr2	stalkie_big_nohaplotig	exon	129178310	129178567	100	-	.	Parent=FBgn0037796.1.mrna1;Target=FBgn0037796.1 118 375 +
Chr2	stalkie_big_nohaplotig	CDS	129159566	129159715	.	-	0	Parent=FBgn0037796.1.mrna1;Target=FBgn0037796.1 1105 1254 +
Chr2	stalkie_big_nohaplotig	CDS	129159882	129160027	.	-	2	Parent=FBgn0037796.1.mrna1;Target=FBgn0037796.1 959 1104 +
Chr2	stalkie_big_nohaplotig	CDS	129160109	129160297	.	-	2	Parent=FBgn0037796.1.mrna1;Target=FBgn0037796.1 770 958 +
Chr2	stalkie_big_nohaplotig	CDS	129161269	129161366	.	-	1	Parent=FBgn0037796.1.mrna1;Target=FBgn0037796.1 672 769 +
Chr2	stalkie_big_nohaplotig	CDS	129161499	129161577	.	-	2	Parent=FBgn0037796.1.mrna1;Target=FBgn0037796.1 593 671 +
Chr2	stalkie_big_nohaplotig	CDS	129161702	129161811	.	-	1	Parent=FBgn0037796.1.mrna1;Target=FBgn0037796.1 483 592 +
Chr2	stalkie_big_nohaplotig	CDS	129167080	129167186	.	-	0	Parent=FBgn0037796.1.mrna1;Target=FBgn0037796.1 376 482 +
Chr2	stalkie_big_nohaplotig	CDS	129178310	129178567	.	-	0	Parent=FBgn0037796.1.mrna1;Target=FBgn0037796.1 118 375 +
Chr2	gffcl	locus	129262252	129328834	.	+	.	ID=RLOC_00021587;geneIDs=FBgn0004575.1.path1;transcripts=FBgn0004575.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129262252	129328834	.	+	.	ID=FBgn0004575.1.mrna1;geneID=FBgn0004575.1.path1;Name=FBgn0004575.1;Dir=sensecoverage=100.0;identity=99.9;matches=3090;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021587
Chr2	stalkie_big_nohaplotig	exon	129262252	129262323	100	+	.	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 1 72 +
Chr2	stalkie_big_nohaplotig	exon	129269013	129269089	98	+	.	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 73 149 +
Chr2	stalkie_big_nohaplotig	exon	129269359	129269693	100	+	.	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 150 484 +
Chr2	stalkie_big_nohaplotig	exon	129271690	129271850	100	+	.	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 485 645 +
Chr2	stalkie_big_nohaplotig	exon	129272087	129272158	100	+	.	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 646 717 +
Chr2	stalkie_big_nohaplotig	exon	129273498	129273641	100	+	.	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 718 861 +
Chr2	stalkie_big_nohaplotig	exon	129273727	129273831	100	+	.	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 862 966 +
Chr2	stalkie_big_nohaplotig	exon	129317922	129318139	100	+	.	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 967 1184 +
Chr2	stalkie_big_nohaplotig	exon	129320698	129320794	100	+	.	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 1185 1281 +
Chr2	stalkie_big_nohaplotig	exon	129324230	129324397	100	+	.	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 1282 1449 +
Chr2	stalkie_big_nohaplotig	exon	129324456	129324880	100	+	.	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 1450 1874 +
Chr2	stalkie_big_nohaplotig	exon	129324971	129325824	100	+	.	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 1875 2728 +
Chr2	stalkie_big_nohaplotig	exon	129328471	129328834	99	+	.	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 2729 3092 +
Chr2	stalkie_big_nohaplotig	CDS	129262252	129262323	.	+	0	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 1 72 +
Chr2	stalkie_big_nohaplotig	CDS	129269013	129269089	.	+	0	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 73 149 +
Chr2	stalkie_big_nohaplotig	CDS	129269359	129269693	.	+	1	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 150 484 +
Chr2	stalkie_big_nohaplotig	CDS	129271690	129271850	.	+	2	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 485 645 +
Chr2	stalkie_big_nohaplotig	CDS	129272087	129272158	.	+	0	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 646 717 +
Chr2	stalkie_big_nohaplotig	CDS	129273498	129273641	.	+	0	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 718 861 +
Chr2	stalkie_big_nohaplotig	CDS	129273727	129273831	.	+	0	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 862 966 +
Chr2	stalkie_big_nohaplotig	CDS	129317922	129318139	.	+	0	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 967 1184 +
Chr2	stalkie_big_nohaplotig	CDS	129320698	129320794	.	+	1	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 1185 1281 +
Chr2	stalkie_big_nohaplotig	CDS	129324230	129324397	.	+	0	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 1282 1449 +
Chr2	stalkie_big_nohaplotig	CDS	129324456	129324880	.	+	0	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 1450 1874 +
Chr2	stalkie_big_nohaplotig	CDS	129324971	129325824	.	+	1	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 1875 2728 +
Chr2	stalkie_big_nohaplotig	CDS	129328471	129328832	.	+	2	Parent=FBgn0004575.1.mrna1;Target=FBgn0004575.1 2729 3090 +
Chr2	gffcl	locus	129273901	129274156	.	+	.	ID=RLOC_00021588;geneIDs=comp102066_c0_seq1.path1;transcripts=comp102066_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129273901	129274156	.	+	.	ID=comp102066_c0_seq1.mrna1;geneID=comp102066_c0_seq1.path1;Name=comp102066_c0_seq1;Dir=indeterminatecoverage=93.0;identity=97.7;matches=250;mismatches=2;indels=4;unknowns=0;Target=comp102066_c0_seq1 271 20 .;CDS_Target=comp102066_c0_seq1 189 121 .;locus=RLOC_00021588
Chr2	stalkie_big_nohaplotig	exon	129273901	129274156	97	+	.	Parent=comp102066_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129274002	129274070	.	+	0	Parent=comp102066_c0_seq1.mrna1
Chr2	gffcl	locus	129274380	129276781	.	-	.	ID=RLOC_00021589;geneIDs=FBgn0025879.1.path1;transcripts=FBgn0025879.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129274380	129276781	.	-	.	ID=FBgn0025879.1.mrna1;geneID=FBgn0025879.1.path1;Name=FBgn0025879.1;Dir=sensecoverage=100.0;identity=100.0;matches=660;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021589
Chr2	stalkie_big_nohaplotig	exon	129274380	129274571	100	-	.	Parent=FBgn0025879.1.mrna1;Target=FBgn0025879.1 469 660 +
Chr2	stalkie_big_nohaplotig	exon	129274657	129274875	100	-	.	Parent=FBgn0025879.1.mrna1;Target=FBgn0025879.1 250 468 +
Chr2	stalkie_big_nohaplotig	exon	129274939	129275024	100	-	.	Parent=FBgn0025879.1.mrna1;Target=FBgn0025879.1 164 249 +
Chr2	stalkie_big_nohaplotig	exon	129276619	129276781	100	-	.	Parent=FBgn0025879.1.mrna1;Target=FBgn0025879.1 1 163 +
Chr2	stalkie_big_nohaplotig	CDS	129274380	129274571	.	-	0	Parent=FBgn0025879.1.mrna1;Target=FBgn0025879.1 469 660 +
Chr2	stalkie_big_nohaplotig	CDS	129274657	129274875	.	-	0	Parent=FBgn0025879.1.mrna1;Target=FBgn0025879.1 250 468 +
Chr2	stalkie_big_nohaplotig	CDS	129274939	129275024	.	-	2	Parent=FBgn0025879.1.mrna1;Target=FBgn0025879.1 164 249 +
Chr2	stalkie_big_nohaplotig	CDS	129276619	129276781	.	-	0	Parent=FBgn0025879.1.mrna1;Target=FBgn0025879.1 1 163 +
Chr2	gffcl	locus	129330707	129332359	.	+	.	ID=RLOC_00021590;geneIDs=comp149471_c0_seq1.path1,comp150568_c1_seq1.path1;transcripts=comp150568_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129331466	129332359	.	+	.	ID=comp150568_c1_seq1.mrna1;geneID=comp150568_c1_seq1.path1;Name=comp150568_c1_seq1;Dir=indeterminatecoverage=97.0;identity=100.0;matches=894;mismatches=0;indels=0;unknowns=0;Target=comp150568_c1_seq1 922 29 .;CDS_Target=comp150568_c1_seq1 160 83 .;locus=RLOC_00021590
Chr2	stalkie_big_nohaplotig	exon	129331466	129332359	100	+	.	Parent=comp150568_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129331520	129331597	.	+	0	Parent=comp150568_c1_seq1.mrna1
Chr2	gffcl	locus	129338458	129340059	.	-	.	ID=RLOC_00021591;geneIDs=FBgn0037798.1.path1;transcripts=FBgn0037798.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129338458	129340059	.	-	.	ID=FBgn0037798.1.mrna1;geneID=FBgn0037798.1.path1;Name=FBgn0037798.1;Dir=sensecoverage=100.0;identity=100.0;matches=522;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021591
Chr2	stalkie_big_nohaplotig	exon	129338458	129338558	100	-	.	Parent=FBgn0037798.1.mrna1;Target=FBgn0037798.1 422 522 +
Chr2	stalkie_big_nohaplotig	exon	129338622	129338760	100	-	.	Parent=FBgn0037798.1.mrna1;Target=FBgn0037798.1 283 421 +
Chr2	stalkie_big_nohaplotig	exon	129339707	129339794	100	-	.	Parent=FBgn0037798.1.mrna1;Target=FBgn0037798.1 195 282 +
Chr2	stalkie_big_nohaplotig	exon	129339866	129340059	100	-	.	Parent=FBgn0037798.1.mrna1;Target=FBgn0037798.1 1 194 +
Chr2	stalkie_big_nohaplotig	CDS	129338458	129338558	.	-	2	Parent=FBgn0037798.1.mrna1;Target=FBgn0037798.1 422 522 +
Chr2	stalkie_big_nohaplotig	CDS	129338622	129338760	.	-	0	Parent=FBgn0037798.1.mrna1;Target=FBgn0037798.1 283 421 +
Chr2	stalkie_big_nohaplotig	CDS	129339707	129339794	.	-	1	Parent=FBgn0037798.1.mrna1;Target=FBgn0037798.1 195 282 +
Chr2	stalkie_big_nohaplotig	CDS	129339866	129340059	.	-	0	Parent=FBgn0037798.1.mrna1;Target=FBgn0037798.1 1 194 +
Chr2	gffcl	locus	129340452	129340874	.	+	.	ID=RLOC_00021592;geneIDs=FBgn0083943.1.path1;transcripts=FBgn0083943.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129340452	129340874	.	+	.	ID=FBgn0083943.1.mrna1;geneID=FBgn0083943.1.path1;Name=FBgn0083943.1;Dir=sensecoverage=100.0;identity=100.0;matches=363;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021592
Chr2	stalkie_big_nohaplotig	exon	129340452	129340605	100	+	.	Parent=FBgn0083943.1.mrna1;Target=FBgn0083943.1 1 154 +
Chr2	stalkie_big_nohaplotig	exon	129340666	129340874	100	+	.	Parent=FBgn0083943.1.mrna1;Target=FBgn0083943.1 155 363 +
Chr2	stalkie_big_nohaplotig	CDS	129340452	129340605	.	+	0	Parent=FBgn0083943.1.mrna1;Target=FBgn0083943.1 1 154 +
Chr2	stalkie_big_nohaplotig	CDS	129340666	129340874	.	+	2	Parent=FBgn0083943.1.mrna1;Target=FBgn0083943.1 155 363 +
Chr2	gffcl	locus	129342325	129379142	.	+	.	ID=RLOC_00021593;geneIDs=comp149302_c0_seq1.path1;transcripts=comp149302_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129342325	129379142	.	+	.	ID=comp149302_c0_seq1.mrna1;geneID=comp149302_c0_seq1.path1;Name=comp149302_c0_seq1;Dir=antisensecoverage=99.8;identity=100.0;matches=814;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021593
Chr2	stalkie_big_nohaplotig	exon	129342325	129342469	100	+	.	Parent=comp149302_c0_seq1.mrna1;Target=comp149302_c0_seq1 672 816 -
Chr2	stalkie_big_nohaplotig	exon	129342570	129342892	100	+	.	Parent=comp149302_c0_seq1.mrna1;Target=comp149302_c0_seq1 349 671 -
Chr2	stalkie_big_nohaplotig	exon	129378797	129379142	100	+	.	Parent=comp149302_c0_seq1.mrna1;Target=comp149302_c0_seq1 3 348 -
Chr2	stalkie_big_nohaplotig	CDS	129342465	129342469	.	+	0	Parent=comp149302_c0_seq1.mrna1;Target=comp149302_c0_seq1 672 676 .
Chr2	stalkie_big_nohaplotig	CDS	129342570	129342892	.	+	1	Parent=comp149302_c0_seq1.mrna1;Target=comp149302_c0_seq1 349 671 .
Chr2	stalkie_big_nohaplotig	CDS	129378797	129378831	.	+	2	Parent=comp149302_c0_seq1.mrna1;Target=comp149302_c0_seq1 314 348 .
Chr2	stalkie_big_nohaplotig	mRNA	129380845	129400047	.	+	.	ID=FBgn0261928.1.mrna1;geneID=FBgn0261928.1.path1;Name=FBgn0261928.1;Dir=sensecoverage=99.9;identity=99.7;matches=8768;mismatches=30;indels=0;unknowns=0;locus=RLOC_00021594
Chr2	stalkie_big_nohaplotig	exon	129380845	129381119	99	+	.	Parent=FBgn0261928.1.mrna1;Target=FBgn0261928.1 8 282 +
Chr2	stalkie_big_nohaplotig	exon	129381205	129381330	100	+	.	Parent=FBgn0261928.1.mrna1;Target=FBgn0261928.1 283 408 +
Chr2	stalkie_big_nohaplotig	exon	129383798	129383902	99	+	.	Parent=FBgn0261928.1.mrna1;Target=FBgn0261928.1 409 513 +
Chr2	stalkie_big_nohaplotig	exon	129384034	129384425	98	+	.	Parent=FBgn0261928.1.mrna1;Target=FBgn0261928.1 514 905 +
Chr2	stalkie_big_nohaplotig	exon	129385427	129385627	99	+	.	Parent=FBgn0261928.1.mrna1;Target=FBgn0261928.1 906 1106 +
Chr2	stalkie_big_nohaplotig	exon	129385685	129392900	99	+	.	Parent=FBgn0261928.1.mrna1;Target=FBgn0261928.1 1107 8322 +
Chr2	stalkie_big_nohaplotig	exon	129392961	129393422	100	+	.	Parent=FBgn0261928.1.mrna1;Target=FBgn0261928.1 8323 8784 +
Chr2	stalkie_big_nohaplotig	exon	129400027	129400047	100	+	.	Parent=FBgn0261928.1.mrna1;Target=FBgn0261928.1 8785 8805 +
Chr2	stalkie_big_nohaplotig	CDS	129380847	129381119	.	+	0	Parent=FBgn0261928.1.mrna1;Target=FBgn0261928.1 10 282 +
Chr2	stalkie_big_nohaplotig	CDS	129381205	129381330	.	+	0	Parent=FBgn0261928.1.mrna1;Target=FBgn0261928.1 283 408 +
Chr2	stalkie_big_nohaplotig	CDS	129383798	129383902	.	+	0	Parent=FBgn0261928.1.mrna1;Target=FBgn0261928.1 409 513 +
Chr2	stalkie_big_nohaplotig	CDS	129384034	129384425	.	+	0	Parent=FBgn0261928.1.mrna1;Target=FBgn0261928.1 514 905 +
Chr2	stalkie_big_nohaplotig	CDS	129385427	129385627	.	+	1	Parent=FBgn0261928.1.mrna1;Target=FBgn0261928.1 906 1106 +
Chr2	stalkie_big_nohaplotig	CDS	129385685	129392900	.	+	1	Parent=FBgn0261928.1.mrna1;Target=FBgn0261928.1 1107 8322 +
Chr2	stalkie_big_nohaplotig	CDS	129392961	129393422	.	+	0	Parent=FBgn0261928.1.mrna1;Target=FBgn0261928.1 8323 8784 +
Chr2	stalkie_big_nohaplotig	CDS	129400027	129400047	.	+	0	Parent=FBgn0261928.1.mrna1;Target=FBgn0261928.1 8785 8805 +
Chr2	gffcl	locus	129398168	129399818	.	-	.	ID=RLOC_00021595;geneIDs=comp118995_c0_seq1.path1,comp161178_c1_seq1.path1;transcripts=comp161178_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129398510	129399818	.	-	.	ID=comp161178_c1_seq1.mrna1;geneID=comp161178_c1_seq1.path1;Name=comp161178_c1_seq1;Dir=indeterminatecoverage=59.2;identity=95.5;matches=1295;mismatches=14;indels=47;unknowns=0;Target=comp161178_c1_seq1 1356 1 .;CDS_Target=comp161178_c1_seq1 1025 996 .;locus=RLOC_00021595
Chr2	stalkie_big_nohaplotig	exon	129398510	129399818	95	-	.	Parent=comp161178_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129398803	129398824	.	-	0	Parent=comp161178_c1_seq1.mrna1
Chr2	gffcl	locus	129403345	129406241	.	+	.	ID=RLOC_00021596;geneIDs=FBgn0037801.1.path1;transcripts=FBgn0037801.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129403345	129406241	.	+	.	ID=FBgn0037801.1.mrna1;geneID=FBgn0037801.1.path1;Name=FBgn0037801.1;Dir=sensecoverage=100.0;identity=99.7;matches=2688;mismatches=8;indels=1;unknowns=0;Target=FBgn0037801.1 3 86 +;locus=RLOC_00021596
Chr2	stalkie_big_nohaplotig	exon	129403345	129403645	98	+	.	Parent=FBgn0037801.1.mrna1;Target=FBgn0037801.1 1 302 +
Chr2	stalkie_big_nohaplotig	exon	129403701	129403926	100	+	.	Parent=FBgn0037801.1.mrna1;Target=FBgn0037801.1 303 528 +
Chr2	stalkie_big_nohaplotig	exon	129404010	129406070	99	+	.	Parent=FBgn0037801.1.mrna1;Target=FBgn0037801.1 529 2589 +
Chr2	stalkie_big_nohaplotig	exon	129406134	129406241	100	+	.	Parent=FBgn0037801.1.mrna1;Target=FBgn0037801.1 2590 2697 +
Chr2	stalkie_big_nohaplotig	CDS	129403347	129403429	.	+	0	Parent=FBgn0037801.1.mrna1
Chr2	gffcl	locus	129408354	129409867	.	+	.	ID=RLOC_00021597;geneIDs=FBgn0040078.1.path1;transcripts=FBgn0040078.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129408354	129409867	.	+	.	ID=FBgn0040078.1.mrna1;geneID=FBgn0040078.1.path1;Name=FBgn0040078.1;Dir=sensecoverage=100.0;identity=100.0;matches=1380;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021597
Chr2	stalkie_big_nohaplotig	exon	129408354	129409182	100	+	.	Parent=FBgn0040078.1.mrna1;Target=FBgn0040078.1 1 829 +
Chr2	stalkie_big_nohaplotig	exon	129409256	129409454	100	+	.	Parent=FBgn0040078.1.mrna1;Target=FBgn0040078.1 830 1028 +
Chr2	stalkie_big_nohaplotig	exon	129409516	129409867	100	+	.	Parent=FBgn0040078.1.mrna1;Target=FBgn0040078.1 1029 1380 +
Chr2	stalkie_big_nohaplotig	CDS	129408354	129409182	.	+	0	Parent=FBgn0040078.1.mrna1;Target=FBgn0040078.1 1 829 +
Chr2	stalkie_big_nohaplotig	CDS	129409256	129409454	.	+	2	Parent=FBgn0040078.1.mrna1;Target=FBgn0040078.1 830 1028 +
Chr2	stalkie_big_nohaplotig	CDS	129409516	129409867	.	+	1	Parent=FBgn0040078.1.mrna1;Target=FBgn0040078.1 1029 1380 +
Chr2	gffcl	locus	129434741	129435088	.	+	.	ID=RLOC_00021598;geneIDs=comp102658_c0_seq1.path1;transcripts=comp102658_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129434741	129435088	.	+	.	ID=comp102658_c0_seq1.mrna1;geneID=comp102658_c0_seq1.path1;Name=comp102658_c0_seq1;Dir=indeterminatecoverage=92.0;identity=92.2;matches=321;mismatches=22;indels=5;unknowns=0;Target=comp102658_c0_seq1 344 2 .;CDS_Target=comp102658_c0_seq1 321 301 .;locus=RLOC_00021598
Chr2	stalkie_big_nohaplotig	exon	129434741	129435088	92	+	.	Parent=comp102658_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129435045	129435065	.	+	0	Parent=comp102658_c0_seq1.mrna1
Chr2	gffcl	locus	129436063	129442654	.	-	.	ID=RLOC_00021599;geneIDs=comp148088_c0_seq1.path1;transcripts=comp148088_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129436063	129442654	.	-	.	ID=comp148088_c0_seq1.mrna1;geneID=comp148088_c0_seq1.path1;Name=comp148088_c0_seq1;Dir=antisensecoverage=99.9;identity=98.7;matches=667;mismatches=7;indels=2;unknowns=0;Target=comp148088_c0_seq1 553 675 .;locus=RLOC_00021599
Chr2	stalkie_big_nohaplotig	exon	129436063	129436315	97	-	.	Parent=comp148088_c0_seq1.mrna1;Target=comp148088_c0_seq1 1 255 -
Chr2	stalkie_big_nohaplotig	exon	129440300	129440532	100	-	.	Parent=comp148088_c0_seq1.mrna1;Target=comp148088_c0_seq1 256 488 -
Chr2	stalkie_big_nohaplotig	exon	129442467	129442654	98	-	.	Parent=comp148088_c0_seq1.mrna1;Target=comp148088_c0_seq1 489 676 -
Chr2	stalkie_big_nohaplotig	CDS	129442531	129442653	.	-	0	Parent=comp148088_c0_seq1.mrna1
Chr2	gffcl	locus	129443549	129443747	.	+	.	ID=RLOC_00021600;geneIDs=comp94050_c0_seq1.path1;transcripts=comp94050_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129443549	129443747	.	+	.	ID=comp94050_c0_seq1.mrna1;geneID=comp94050_c0_seq1.path1;Name=comp94050_c0_seq1;Dir=indeterminatecoverage=89.6;identity=98.5;matches=196;mismatches=3;indels=0;unknowns=0;Target=comp94050_c0_seq1 199 1 .;CDS_Target=comp94050_c0_seq1 198 133 .;locus=RLOC_00021600
Chr2	stalkie_big_nohaplotig	exon	129443549	129443747	98	+	.	Parent=comp94050_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129443681	129443746	.	+	0	Parent=comp94050_c0_seq1.mrna1
Chr2	gffcl	locus	129456036	129466542	.	+	.	ID=RLOC_00021601;geneIDs=FBgn0262617.1.path1,comp145917_c0_seq1.path1;transcripts=FBgn0262617.1.mrna1,comp145917_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129456036	129466542	.	+	.	ID=FBgn0262617.1.mrna1;geneID=FBgn0262617.1.path1;Name=FBgn0262617.1;Dir=sensecoverage=100.0;identity=100.0;matches=3467;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021601
Chr2	stalkie_big_nohaplotig	exon	129456036	129456208	100	+	.	Parent=FBgn0262617.1.mrna1;Target=FBgn0262617.1 1 173 +
Chr2	stalkie_big_nohaplotig	exon	129456270	129456469	100	+	.	Parent=FBgn0262617.1.mrna1;Target=FBgn0262617.1 174 373 +
Chr2	stalkie_big_nohaplotig	exon	129456527	129456744	100	+	.	Parent=FBgn0262617.1.mrna1;Target=FBgn0262617.1 374 591 +
Chr2	stalkie_big_nohaplotig	exon	129456840	129457428	99	+	.	Parent=FBgn0262617.1.mrna1;Target=FBgn0262617.1 592 1180 +
Chr2	stalkie_big_nohaplotig	exon	129458401	129459570	100	+	.	Parent=FBgn0262617.1.mrna1;Target=FBgn0262617.1 1181 2350 +
Chr2	stalkie_big_nohaplotig	exon	129462260	129462602	100	+	.	Parent=FBgn0262617.1.mrna1;Target=FBgn0262617.1 2351 2693 +
Chr2	stalkie_big_nohaplotig	exon	129462666	129462920	100	+	.	Parent=FBgn0262617.1.mrna1;Target=FBgn0262617.1 2694 2948 +
Chr2	stalkie_big_nohaplotig	exon	129462977	129463090	100	+	.	Parent=FBgn0262617.1.mrna1;Target=FBgn0262617.1 2949 3062 +
Chr2	stalkie_big_nohaplotig	exon	129463653	129463776	100	+	.	Parent=FBgn0262617.1.mrna1;Target=FBgn0262617.1 3063 3186 +
Chr2	stalkie_big_nohaplotig	exon	129463918	129464045	100	+	.	Parent=FBgn0262617.1.mrna1;Target=FBgn0262617.1 3187 3314 +
Chr2	stalkie_big_nohaplotig	exon	129466389	129466542	100	+	.	Parent=FBgn0262617.1.mrna1;Target=FBgn0262617.1 3315 3468 +
Chr2	stalkie_big_nohaplotig	CDS	129456036	129456208	.	+	0	Parent=FBgn0262617.1.mrna1;Target=FBgn0262617.1 1 173 +
Chr2	stalkie_big_nohaplotig	CDS	129456270	129456469	.	+	1	Parent=FBgn0262617.1.mrna1;Target=FBgn0262617.1 174 373 +
Chr2	stalkie_big_nohaplotig	CDS	129456527	129456744	.	+	2	Parent=FBgn0262617.1.mrna1;Target=FBgn0262617.1 374 591 +
Chr2	stalkie_big_nohaplotig	CDS	129456840	129457428	.	+	0	Parent=FBgn0262617.1.mrna1;Target=FBgn0262617.1 592 1180 +
Chr2	stalkie_big_nohaplotig	CDS	129458401	129459570	.	+	2	Parent=FBgn0262617.1.mrna1;Target=FBgn0262617.1 1181 2350 +
Chr2	stalkie_big_nohaplotig	CDS	129462260	129462602	.	+	2	Parent=FBgn0262617.1.mrna1;Target=FBgn0262617.1 2351 2693 +
Chr2	stalkie_big_nohaplotig	CDS	129462666	129462920	.	+	1	Parent=FBgn0262617.1.mrna1;Target=FBgn0262617.1 2694 2948 +
Chr2	stalkie_big_nohaplotig	CDS	129462977	129463090	.	+	1	Parent=FBgn0262617.1.mrna1;Target=FBgn0262617.1 2949 3062 +
Chr2	stalkie_big_nohaplotig	CDS	129463653	129463776	.	+	1	Parent=FBgn0262617.1.mrna1;Target=FBgn0262617.1 3063 3186 +
Chr2	stalkie_big_nohaplotig	CDS	129463918	129464045	.	+	0	Parent=FBgn0262617.1.mrna1;Target=FBgn0262617.1 3187 3314 +
Chr2	stalkie_big_nohaplotig	CDS	129466389	129466542	.	+	1	Parent=FBgn0262617.1.mrna1;Target=FBgn0262617.1 3315 3468 +
Chr2	stalkie_big_nohaplotig	mRNA	129459548	129462283	.	+	.	ID=comp145917_c0_seq1.mrna1;geneID=comp145917_c0_seq1.path1;Name=comp145917_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=629;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021601
Chr2	stalkie_big_nohaplotig	exon	129459548	129459570	100	+	.	Parent=comp145917_c0_seq1.mrna1;Target=comp145917_c0_seq1 1 23 +
Chr2	stalkie_big_nohaplotig	exon	129460920	129461501	100	+	.	Parent=comp145917_c0_seq1.mrna1;Target=comp145917_c0_seq1 24 605 +
Chr2	stalkie_big_nohaplotig	exon	129462260	129462283	100	+	.	Parent=comp145917_c0_seq1.mrna1;Target=comp145917_c0_seq1 606 629 +
Chr2	stalkie_big_nohaplotig	CDS	129459549	129459570	.	+	0	Parent=comp145917_c0_seq1.mrna1;Target=comp145917_c0_seq1 2 23 +
Chr2	stalkie_big_nohaplotig	CDS	129460920	129461501	.	+	2	Parent=comp145917_c0_seq1.mrna1;Target=comp145917_c0_seq1 24 605 +
Chr2	stalkie_big_nohaplotig	CDS	129462260	129462282	.	+	2	Parent=comp145917_c0_seq1.mrna1;Target=comp145917_c0_seq1 606 628 +
Chr2	gffcl	locus	129467163	129467615	.	+	.	ID=RLOC_00021602;geneIDs=comp129036_c0_seq1.path1;transcripts=comp129036_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129467163	129467615	.	+	.	ID=comp129036_c0_seq1.mrna1;geneID=comp129036_c0_seq1.path1;Name=comp129036_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.0;matches=445;mismatches=6;indels=3;unknowns=0;Target=comp129036_c0_seq1 452 1 .;CDS_Target=comp129036_c0_seq1 17 3 .;locus=RLOC_00021602
Chr2	stalkie_big_nohaplotig	exon	129467163	129467615	98	+	.	Parent=comp129036_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129467165	129467178	.	+	0	Parent=comp129036_c0_seq1.mrna1
Chr2	gffcl	locus	129467653	129468468	.	-	.	ID=RLOC_00021603;geneIDs=comp151403_c0_seq1.path1;transcripts=comp151403_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129467653	129468468	.	-	.	ID=comp151403_c0_seq1.mrna1;geneID=comp151403_c0_seq1.path1;Name=comp151403_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=816;mismatches=0;indels=0;unknowns=0;Target=comp151403_c0_seq1 816 1 .;CDS_Target=comp151403_c0_seq1 636 430 .;locus=RLOC_00021603
Chr2	stalkie_big_nohaplotig	exon	129467653	129468468	100	-	.	Parent=comp151403_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129467833	129468039	.	-	0	Parent=comp151403_c0_seq1.mrna1
Chr2	gffcl	locus	129470840	129471763	.	+	.	ID=RLOC_00021604;geneIDs=comp159148_c0_seq1.path1;transcripts=comp159148_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129470840	129471763	.	+	.	ID=comp159148_c0_seq1.mrna1;geneID=comp159148_c0_seq1.path1;Name=comp159148_c0_seq1;Dir=indeterminatecoverage=99.9;identity=89.1;matches=842;mismatches=29;indels=74;unknowns=0;Target=comp159148_c0_seq1 892 1 .;CDS_Target=comp159148_c0_seq1 395 348 .;locus=RLOC_00021604
Chr2	stalkie_big_nohaplotig	exon	129470840	129471763	89	+	.	Parent=comp159148_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129471221	129471268	.	+	0	Parent=comp159148_c0_seq1.mrna1
Chr2	gffcl	locus	129472619	129472891	.	-	.	ID=RLOC_00021605;geneIDs=comp149669_c0_seq1.path1;transcripts=comp149669_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129472619	129472891	.	-	.	ID=comp149669_c0_seq1.mrna1;geneID=comp149669_c0_seq1.path1;Name=comp149669_c0_seq1;Dir=indeterminatecoverage=94.5;identity=97.8;matches=267;mismatches=6;indels=0;unknowns=0;Target=comp149669_c0_seq1 273 1 .;CDS_Target=comp149669_c0_seq1 28 2 .;locus=RLOC_00021605
Chr2	stalkie_big_nohaplotig	exon	129472619	129472891	97	-	.	Parent=comp149669_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129472864	129472890	.	-	0	Parent=comp149669_c0_seq1.mrna1
Chr2	gffcl	locus	129473793	129474855	.	-	.	ID=RLOC_00021606;geneIDs=comp137223_c0_seq1.path1;transcripts=comp137223_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129473793	129474855	.	-	.	ID=comp137223_c0_seq1.mrna1;geneID=comp137223_c0_seq1.path1;Name=comp137223_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.8;matches=987;mismatches=48;indels=29;unknowns=0;Target=comp137223_c0_seq1 1036 1 .;CDS_Target=comp137223_c0_seq1 573 472 .;locus=RLOC_00021606
Chr2	stalkie_big_nohaplotig	exon	129473793	129474855	92	-	.	Parent=comp137223_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129474256	129474357	.	-	0	Parent=comp137223_c0_seq1.mrna1
Chr2	gffcl	locus	129481085	129481825	.	+	.	ID=RLOC_00021607;geneIDs=comp137554_c0_seq1.path1;transcripts=comp137554_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129481085	129481825	.	+	.	ID=comp137554_c0_seq1.mrna1;geneID=comp137554_c0_seq1.path1;Name=comp137554_c0_seq1;Dir=indeterminatecoverage=98.0;identity=99.5;matches=739;mismatches=2;indels=2;unknowns=0;Target=comp137554_c0_seq1 758 16 .;CDS_Target=comp137554_c0_seq1 310 257 .;locus=RLOC_00021607
Chr2	stalkie_big_nohaplotig	exon	129481085	129481825	99	+	.	Parent=comp137554_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129481325	129481377	.	+	0	Parent=comp137554_c0_seq1.mrna1
Chr2	gffcl	locus	129483680	129496357	.	-	.	ID=RLOC_00021608;geneIDs=FBgn0037807.1.path1;transcripts=FBgn0037807.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129483680	129496357	.	-	.	ID=FBgn0037807.1.mrna1;geneID=FBgn0037807.1.path1;Name=FBgn0037807.1;Dir=sensecoverage=100.0;identity=100.0;matches=1746;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021608
Chr2	stalkie_big_nohaplotig	exon	129483680	129483737	100	-	.	Parent=FBgn0037807.1.mrna1;Target=FBgn0037807.1 1689 1746 +
Chr2	stalkie_big_nohaplotig	exon	129483798	129483918	100	-	.	Parent=FBgn0037807.1.mrna1;Target=FBgn0037807.1 1568 1688 +
Chr2	stalkie_big_nohaplotig	exon	129483976	129484345	100	-	.	Parent=FBgn0037807.1.mrna1;Target=FBgn0037807.1 1198 1567 +
Chr2	stalkie_big_nohaplotig	exon	129484436	129484575	100	-	.	Parent=FBgn0037807.1.mrna1;Target=FBgn0037807.1 1058 1197 +
Chr2	stalkie_big_nohaplotig	exon	129484688	129484943	100	-	.	Parent=FBgn0037807.1.mrna1;Target=FBgn0037807.1 802 1057 +
Chr2	stalkie_big_nohaplotig	exon	129485003	129485123	100	-	.	Parent=FBgn0037807.1.mrna1;Target=FBgn0037807.1 681 801 +
Chr2	stalkie_big_nohaplotig	exon	129485188	129485813	100	-	.	Parent=FBgn0037807.1.mrna1;Target=FBgn0037807.1 55 680 +
Chr2	stalkie_big_nohaplotig	exon	129496304	129496357	100	-	.	Parent=FBgn0037807.1.mrna1;Target=FBgn0037807.1 1 54 +
Chr2	stalkie_big_nohaplotig	CDS	129483680	129483737	.	-	1	Parent=FBgn0037807.1.mrna1;Target=FBgn0037807.1 1689 1746 +
Chr2	stalkie_big_nohaplotig	CDS	129483798	129483918	.	-	2	Parent=FBgn0037807.1.mrna1;Target=FBgn0037807.1 1568 1688 +
Chr2	stalkie_big_nohaplotig	CDS	129483976	129484345	.	-	0	Parent=FBgn0037807.1.mrna1;Target=FBgn0037807.1 1198 1567 +
Chr2	stalkie_big_nohaplotig	CDS	129484436	129484575	.	-	2	Parent=FBgn0037807.1.mrna1;Target=FBgn0037807.1 1058 1197 +
Chr2	stalkie_big_nohaplotig	CDS	129484688	129484943	.	-	0	Parent=FBgn0037807.1.mrna1;Target=FBgn0037807.1 802 1057 +
Chr2	stalkie_big_nohaplotig	CDS	129485003	129485123	.	-	1	Parent=FBgn0037807.1.mrna1;Target=FBgn0037807.1 681 801 +
Chr2	stalkie_big_nohaplotig	CDS	129485188	129485813	.	-	0	Parent=FBgn0037807.1.mrna1;Target=FBgn0037807.1 55 680 +
Chr2	stalkie_big_nohaplotig	CDS	129496304	129496357	.	-	0	Parent=FBgn0037807.1.mrna1;Target=FBgn0037807.1 1 54 +
Chr2	gffcl	locus	129506030	129549383	.	-	.	ID=RLOC_00021609;geneIDs=FBgn0037808.1.path1;transcripts=FBgn0037808.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129506030	129549383	.	-	.	ID=FBgn0037808.1.mrna1;geneID=FBgn0037808.1.path1;Name=FBgn0037808.1;Dir=sensecoverage=100.0;identity=99.8;matches=12491;mismatches=23;indels=0;unknowns=0;locus=RLOC_00021609
Chr2	stalkie_big_nohaplotig	exon	129506030	129506183	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 12361 12514 +
Chr2	stalkie_big_nohaplotig	exon	129506243	129506457	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 12146 12360 +
Chr2	stalkie_big_nohaplotig	exon	129506522	129506957	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 11710 12145 +
Chr2	stalkie_big_nohaplotig	exon	129507037	129507221	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 11525 11709 +
Chr2	stalkie_big_nohaplotig	exon	129507297	129507578	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 11243 11524 +
Chr2	stalkie_big_nohaplotig	exon	129509559	129510995	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 9806 11242 +
Chr2	stalkie_big_nohaplotig	exon	129511057	129511466	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 9396 9805 +
Chr2	stalkie_big_nohaplotig	exon	129511539	129512229	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 8705 9395 +
Chr2	stalkie_big_nohaplotig	exon	129512295	129512540	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 8459 8704 +
Chr2	stalkie_big_nohaplotig	exon	129512653	129512770	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 8341 8458 +
Chr2	stalkie_big_nohaplotig	exon	129512852	129513072	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 8120 8340 +
Chr2	stalkie_big_nohaplotig	exon	129513131	129513395	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 7855 8119 +
Chr2	stalkie_big_nohaplotig	exon	129513453	129513812	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 7495 7854 +
Chr2	stalkie_big_nohaplotig	exon	129513887	129514311	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 7070 7494 +
Chr2	stalkie_big_nohaplotig	exon	129514733	129514798	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 7004 7069 +
Chr2	stalkie_big_nohaplotig	exon	129514869	129514992	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 6880 7003 +
Chr2	stalkie_big_nohaplotig	exon	129515343	129515492	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 6730 6879 +
Chr2	stalkie_big_nohaplotig	exon	129515551	129515790	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 6490 6729 +
Chr2	stalkie_big_nohaplotig	exon	129515858	129516033	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 6314 6489 +
Chr2	stalkie_big_nohaplotig	exon	129516093	129516355	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 6051 6313 +
Chr2	stalkie_big_nohaplotig	exon	129516416	129516627	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 5839 6050 +
Chr2	stalkie_big_nohaplotig	exon	129517236	129517433	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 5641 5838 +
Chr2	stalkie_big_nohaplotig	exon	129517493	129518442	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 4691 5640 +
Chr2	stalkie_big_nohaplotig	exon	129542819	129542918	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 4591 4690 +
Chr2	stalkie_big_nohaplotig	exon	129542975	129543219	99	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 4346 4590 +
Chr2	stalkie_big_nohaplotig	exon	129543291	129543457	98	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 4179 4345 +
Chr2	stalkie_big_nohaplotig	exon	129543510	129543770	98	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 3918 4178 +
Chr2	stalkie_big_nohaplotig	exon	129543984	129544395	99	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 3506 3917 +
Chr2	stalkie_big_nohaplotig	exon	129544464	129544682	99	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 3287 3505 +
Chr2	stalkie_big_nohaplotig	exon	129545078	129545310	98	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 3054 3286 +
Chr2	stalkie_big_nohaplotig	exon	129545504	129546392	99	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 2165 3053 +
Chr2	stalkie_big_nohaplotig	exon	129546462	129547094	99	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 1532 2164 +
Chr2	stalkie_big_nohaplotig	exon	129547161	129548154	99	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 538 1531 +
Chr2	stalkie_big_nohaplotig	exon	129548231	129548544	100	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 224 537 +
Chr2	stalkie_big_nohaplotig	exon	129549161	129549383	99	-	.	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 1 223 +
Chr2	stalkie_big_nohaplotig	CDS	129506031	129506183	.	-	0	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 12361 12513 +
Chr2	stalkie_big_nohaplotig	CDS	129506243	129506457	.	-	2	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 12146 12360 +
Chr2	stalkie_big_nohaplotig	CDS	129506522	129506957	.	-	0	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 11710 12145 +
Chr2	stalkie_big_nohaplotig	CDS	129507037	129507221	.	-	2	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 11525 11709 +
Chr2	stalkie_big_nohaplotig	CDS	129507297	129507578	.	-	2	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 11243 11524 +
Chr2	stalkie_big_nohaplotig	CDS	129509559	129510995	.	-	2	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 9806 11242 +
Chr2	stalkie_big_nohaplotig	CDS	129511057	129511466	.	-	1	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 9396 9805 +
Chr2	stalkie_big_nohaplotig	CDS	129511539	129512229	.	-	2	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 8705 9395 +
Chr2	stalkie_big_nohaplotig	CDS	129512295	129512540	.	-	2	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 8459 8704 +
Chr2	stalkie_big_nohaplotig	CDS	129512653	129512770	.	-	0	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 8341 8458 +
Chr2	stalkie_big_nohaplotig	CDS	129512852	129513072	.	-	2	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 8120 8340 +
Chr2	stalkie_big_nohaplotig	CDS	129513131	129513395	.	-	0	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 7855 8119 +
Chr2	stalkie_big_nohaplotig	CDS	129513453	129513812	.	-	0	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 7495 7854 +
Chr2	stalkie_big_nohaplotig	CDS	129513887	129514311	.	-	2	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 7070 7494 +
Chr2	stalkie_big_nohaplotig	CDS	129514733	129514798	.	-	2	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 7004 7069 +
Chr2	stalkie_big_nohaplotig	CDS	129514869	129514992	.	-	0	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 6880 7003 +
Chr2	stalkie_big_nohaplotig	CDS	129515343	129515492	.	-	0	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 6730 6879 +
Chr2	stalkie_big_nohaplotig	CDS	129515551	129515790	.	-	0	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 6490 6729 +
Chr2	stalkie_big_nohaplotig	CDS	129515858	129516033	.	-	2	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 6314 6489 +
Chr2	stalkie_big_nohaplotig	CDS	129516093	129516355	.	-	1	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 6051 6313 +
Chr2	stalkie_big_nohaplotig	CDS	129516416	129516627	.	-	0	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 5839 6050 +
Chr2	stalkie_big_nohaplotig	CDS	129517236	129517433	.	-	0	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 5641 5838 +
Chr2	stalkie_big_nohaplotig	CDS	129517493	129518442	.	-	2	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 4691 5640 +
Chr2	stalkie_big_nohaplotig	CDS	129542819	129542918	.	-	0	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 4591 4690 +
Chr2	stalkie_big_nohaplotig	CDS	129542975	129543219	.	-	2	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 4346 4590 +
Chr2	stalkie_big_nohaplotig	CDS	129543291	129543457	.	-	1	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 4179 4345 +
Chr2	stalkie_big_nohaplotig	CDS	129543510	129543770	.	-	1	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 3918 4178 +
Chr2	stalkie_big_nohaplotig	CDS	129543984	129544395	.	-	2	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 3506 3917 +
Chr2	stalkie_big_nohaplotig	CDS	129544464	129544682	.	-	2	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 3287 3505 +
Chr2	stalkie_big_nohaplotig	CDS	129545078	129545310	.	-	1	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 3054 3286 +
Chr2	stalkie_big_nohaplotig	CDS	129545504	129546392	.	-	2	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 2165 3053 +
Chr2	stalkie_big_nohaplotig	CDS	129546462	129547094	.	-	2	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 1532 2164 +
Chr2	stalkie_big_nohaplotig	CDS	129547161	129548154	.	-	0	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 538 1531 +
Chr2	stalkie_big_nohaplotig	CDS	129548231	129548544	.	-	2	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 224 537 +
Chr2	stalkie_big_nohaplotig	CDS	129549161	129549383	.	-	0	Parent=FBgn0037808.1.mrna1;Target=FBgn0037808.1 1 223 +
Chr2	gffcl	locus	129551552	129552628	.	+	.	ID=RLOC_00021610;geneIDs=FBgn0037809.1.path1;transcripts=FBgn0037809.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129551552	129552628	.	+	.	ID=FBgn0037809.1.mrna1;geneID=FBgn0037809.1.path1;Name=FBgn0037809.1;Dir=sensecoverage=100.0;identity=99.5;matches=964;mismatches=5;indels=0;unknowns=0;locus=RLOC_00021610
Chr2	stalkie_big_nohaplotig	exon	129551552	129551598	100	+	.	Parent=FBgn0037809.1.mrna1;Target=FBgn0037809.1 1 47 +
Chr2	stalkie_big_nohaplotig	exon	129551654	129551753	99	+	.	Parent=FBgn0037809.1.mrna1;Target=FBgn0037809.1 48 147 +
Chr2	stalkie_big_nohaplotig	exon	129551807	129552628	99	+	.	Parent=FBgn0037809.1.mrna1;Target=FBgn0037809.1 148 969 +
Chr2	stalkie_big_nohaplotig	CDS	129551552	129551598	.	+	0	Parent=FBgn0037809.1.mrna1;Target=FBgn0037809.1 1 47 +
Chr2	stalkie_big_nohaplotig	CDS	129551654	129551753	.	+	1	Parent=FBgn0037809.1.mrna1;Target=FBgn0037809.1 48 147 +
Chr2	stalkie_big_nohaplotig	CDS	129551807	129552628	.	+	0	Parent=FBgn0037809.1.mrna1;Target=FBgn0037809.1 148 969 +
Chr2	gffcl	locus	129553515	129554732	.	-	.	ID=RLOC_00021611;geneIDs=FBgn0035102.1.path1;transcripts=FBgn0035102.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129553515	129554732	.	-	.	ID=FBgn0035102.1.mrna1;geneID=FBgn0035102.1.path1;Name=FBgn0035102.1;Dir=sensecoverage=100.0;identity=98.9;matches=1021;mismatches=11;indels=0;unknowns=0;locus=RLOC_00021611
Chr2	stalkie_big_nohaplotig	exon	129553515	129553821	98	-	.	Parent=FBgn0035102.1.mrna1;Target=FBgn0035102.1 726 1032 +
Chr2	stalkie_big_nohaplotig	exon	129553878	129554049	99	-	.	Parent=FBgn0035102.1.mrna1;Target=FBgn0035102.1 554 725 +
Chr2	stalkie_big_nohaplotig	exon	129554104	129554179	100	-	.	Parent=FBgn0035102.1.mrna1;Target=FBgn0035102.1 478 553 +
Chr2	stalkie_big_nohaplotig	exon	129554256	129554732	99	-	.	Parent=FBgn0035102.1.mrna1;Target=FBgn0035102.1 1 477 +
Chr2	stalkie_big_nohaplotig	CDS	129553515	129553821	.	-	1	Parent=FBgn0035102.1.mrna1;Target=FBgn0035102.1 726 1032 +
Chr2	stalkie_big_nohaplotig	CDS	129553878	129554049	.	-	2	Parent=FBgn0035102.1.mrna1;Target=FBgn0035102.1 554 725 +
Chr2	stalkie_big_nohaplotig	CDS	129554104	129554179	.	-	0	Parent=FBgn0035102.1.mrna1;Target=FBgn0035102.1 478 553 +
Chr2	stalkie_big_nohaplotig	CDS	129554256	129554732	.	-	0	Parent=FBgn0035102.1.mrna1;Target=FBgn0035102.1 1 477 +
Chr2	gffcl	locus	129561366	129568564	.	+	.	ID=RLOC_00021612;geneIDs=ORF7.path1;transcripts=ORF7.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129561366	129568564	.	+	.	ID=ORF7.mrna1;geneID=ORF7.path1;Name=ORF7;Dir=sensecoverage=100.0;identity=99.4;matches=5469;mismatches=32;indels=1;unknowns=0;Target=ORF7 3 86 +;locus=RLOC_00021612
Chr2	stalkie_big_nohaplotig	exon	129561366	129566011	99	+	.	Parent=ORF7.mrna1;Target=ORF7 1 4647 +
Chr2	stalkie_big_nohaplotig	exon	129566104	129566151	97	+	.	Parent=ORF7.mrna1;Target=ORF7 4648 4695 +
Chr2	stalkie_big_nohaplotig	exon	129566212	129566326	96	+	.	Parent=ORF7.mrna1;Target=ORF7 4696 4810 +
Chr2	stalkie_big_nohaplotig	exon	129566388	129566476	100	+	.	Parent=ORF7.mrna1;Target=ORF7 4811 4899 +
Chr2	stalkie_big_nohaplotig	exon	129567897	129567963	95	+	.	Parent=ORF7.mrna1;Target=ORF7 4900 4966 +
Chr2	stalkie_big_nohaplotig	exon	129568029	129568564	99	+	.	Parent=ORF7.mrna1;Target=ORF7 4967 5502 +
Chr2	stalkie_big_nohaplotig	CDS	129561368	129561450	.	+	0	Parent=ORF7.mrna1
Chr2	gffcl	locus	129573622	129573697	.	+	.	ID=RLOC_00021613;geneIDs=comp147878_c0_seq1.path1;transcripts=comp147878_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129573622	129573697	.	+	.	ID=comp147878_c0_seq1.mrna1;geneID=comp147878_c0_seq1.path1;Name=comp147878_c0_seq1;Dir=indeterminatecoverage=17.2;identity=100.0;matches=76;mismatches=0;indels=0;unknowns=0;Target=comp147878_c0_seq1 76 1 .;locus=RLOC_00021613
Chr2	stalkie_big_nohaplotig	exon	129573622	129573697	100	+	.	Parent=comp147878_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129573622	129573697	.	+	0	Parent=comp147878_c0_seq1.mrna1
Chr2	gffcl	locus	129573773	129574192	.	-	.	ID=RLOC_00021614;geneIDs=comp464256_c0_seq1.path1;transcripts=comp464256_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129573773	129574192	.	-	.	ID=comp464256_c0_seq1.mrna1;geneID=comp464256_c0_seq1.path1;Name=comp464256_c0_seq1;Dir=indeterminatecoverage=99.0;identity=98.6;matches=415;mismatches=0;indels=6;unknowns=0;Target=comp464256_c0_seq1 420 5 .;CDS_Target=comp464256_c0_seq1 420 160 .;locus=RLOC_00021614
Chr2	stalkie_big_nohaplotig	exon	129573773	129574192	98	-	.	Parent=comp464256_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129573773	129574033	.	-	0	Parent=comp464256_c0_seq1.mrna1
Chr2	gffcl	locus	129578547	129579218	.	+	.	ID=RLOC_00021615;geneIDs=comp112652_c0_seq1.path1;transcripts=comp112652_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129578547	129579218	.	+	.	ID=comp112652_c0_seq1.mrna1;geneID=comp112652_c0_seq1.path1;Name=comp112652_c0_seq1;Dir=indeterminatecoverage=96.6;identity=100.0;matches=672;mismatches=0;indels=0;unknowns=0;Target=comp112652_c0_seq1 674 3 .;CDS_Target=comp112652_c0_seq1 244 128 .;locus=RLOC_00021615
Chr2	stalkie_big_nohaplotig	exon	129578547	129579218	100	+	.	Parent=comp112652_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129578672	129578788	.	+	0	Parent=comp112652_c0_seq1.mrna1
Chr2	gffcl	locus	129579333	129579787	.	-	.	ID=RLOC_00021616;geneIDs=comp1035497_c0_seq1.path1;transcripts=comp1035497_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129579333	129579787	.	-	.	ID=comp1035497_c0_seq1.mrna1;geneID=comp1035497_c0_seq1.path1;Name=comp1035497_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=455;mismatches=0;indels=0;unknowns=0;Target=comp1035497_c0_seq1 455 1 .;CDS_Target=comp1035497_c0_seq1 139 2 .;locus=RLOC_00021616
Chr2	stalkie_big_nohaplotig	exon	129579333	129579787	100	-	.	Parent=comp1035497_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129579649	129579786	.	-	0	Parent=comp1035497_c0_seq1.mrna1
Chr2	gffcl	locus	129590300	129591613	.	-	.	ID=RLOC_00021617;geneIDs=comp141537_c0_seq1.path1;transcripts=comp141537_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129590300	129591613	.	-	.	ID=comp141537_c0_seq1.mrna1;geneID=comp141537_c0_seq1.path1;Name=comp141537_c0_seq1;Dir=sensecoverage=99.9;identity=100.0;matches=773;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021617
Chr2	stalkie_big_nohaplotig	exon	129590300	129590698	100	-	.	Parent=comp141537_c0_seq1.mrna1;Target=comp141537_c0_seq1 375 773 +
Chr2	stalkie_big_nohaplotig	exon	129591240	129591613	100	-	.	Parent=comp141537_c0_seq1.mrna1;Target=comp141537_c0_seq1 1 374 +
Chr2	stalkie_big_nohaplotig	CDS	129590620	129590698	.	-	1	Parent=comp141537_c0_seq1.mrna1;Target=comp141537_c0_seq1 375 453 +
Chr2	stalkie_big_nohaplotig	CDS	129591240	129591262	.	-	0	Parent=comp141537_c0_seq1.mrna1;Target=comp141537_c0_seq1 352 374 +
Chr2	gffcl	locus	129605698	129607891	.	+	.	ID=RLOC_00021618;geneIDs=FBgn0015396.1.path1,comp157927_c0_seq1.path1;transcripts=FBgn0015396.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129605698	129607891	.	+	.	ID=FBgn0015396.1.mrna1;geneID=FBgn0015396.1.path1;Name=FBgn0015396.1;Dir=sensecoverage=96.0;identity=99.9;matches=2129;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021618
Chr2	stalkie_big_nohaplotig	exon	129605698	129607581	99	+	.	Parent=FBgn0015396.1.mrna1;Target=FBgn0015396.1 85 1968 +
Chr2	stalkie_big_nohaplotig	exon	129607644	129607891	99	+	.	Parent=FBgn0015396.1.mrna1;Target=FBgn0015396.1 1969 2216 +
Chr2	stalkie_big_nohaplotig	CDS	129605698	129607581	.	+	0	Parent=FBgn0015396.1.mrna1;Target=FBgn0015396.1 85 1968 +
Chr2	stalkie_big_nohaplotig	CDS	129607644	129607889	.	+	0	Parent=FBgn0015396.1.mrna1;Target=FBgn0015396.1 1969 2214 +
Chr2	gffcl	locus	129622144	129622963	.	+	.	ID=RLOC_00021619;geneIDs=comp158097_c0_seq1.path1;transcripts=comp158097_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129622144	129622963	.	+	.	ID=comp158097_c0_seq1.mrna1;geneID=comp158097_c0_seq1.path1;Name=comp158097_c0_seq1;Dir=indeterminatecoverage=100.0;identity=88.6;matches=770;mismatches=36;indels=63;unknowns=0;Target=comp158097_c0_seq1 855 1 .;CDS_Target=comp158097_c0_seq1 395 273 .;locus=RLOC_00021619
Chr2	stalkie_big_nohaplotig	exon	129622144	129622963	88	+	.	Parent=comp158097_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129622417	129622539	.	+	0	Parent=comp158097_c0_seq1.mrna1
Chr2	gffcl	locus	129750872	129751060	.	+	.	ID=RLOC_00021621;geneIDs=comp2825838_c0_seq1.path1;transcripts=comp2825838_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129750872	129751060	.	+	.	ID=comp2825838_c0_seq1.mrna1;geneID=comp2825838_c0_seq1.path1;Name=comp2825838_c0_seq1;Dir=indeterminatecoverage=80.1;identity=100.0;matches=189;mismatches=0;indels=0;unknowns=0;Target=comp2825838_c0_seq1 236 48 .;CDS_Target=comp2825838_c0_seq1 234 133 .;locus=RLOC_00021621
Chr2	stalkie_big_nohaplotig	exon	129750872	129751060	100	+	.	Parent=comp2825838_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129750957	129751058	.	+	0	Parent=comp2825838_c0_seq1.mrna1
Chr2	gffcl	locus	129952815	129953157	.	-	.	ID=RLOC_00021622;geneIDs=comp394880_c0_seq1.path1;transcripts=comp394880_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129952815	129953157	.	-	.	ID=comp394880_c0_seq1.mrna1;geneID=comp394880_c0_seq1.path1;Name=comp394880_c0_seq1;Dir=indeterminatecoverage=93.5;identity=100.0;matches=343;mismatches=0;indels=0;unknowns=0;Target=comp394880_c0_seq1 367 25 .;CDS_Target=comp394880_c0_seq1 315 247 .;locus=RLOC_00021622
Chr2	stalkie_big_nohaplotig	exon	129952815	129953157	100	-	.	Parent=comp394880_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129952867	129952935	.	-	0	Parent=comp394880_c0_seq1.mrna1
Chr2	gffcl	locus	129954005	129954494	.	+	.	ID=RLOC_00021623;geneIDs=comp100800_c1_seq1.path1;transcripts=comp100800_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129954005	129954494	.	+	.	ID=comp100800_c1_seq1.mrna1;geneID=comp100800_c1_seq1.path1;Name=comp100800_c1_seq1;Dir=indeterminatecoverage=99.4;identity=99.8;matches=489;mismatches=0;indels=1;unknowns=0;Target=comp100800_c1_seq1 492 4 .;CDS_Target=comp100800_c1_seq1 111 4 .;locus=RLOC_00021623
Chr2	stalkie_big_nohaplotig	exon	129954005	129954494	99	+	.	Parent=comp100800_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129954005	129954112	.	+	0	Parent=comp100800_c1_seq1.mrna1
Chr2	gffcl	locus	129954821	129956081	.	-	.	ID=RLOC_00021624;geneIDs=comp152767_c0_seq1.path1;transcripts=comp152767_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129954821	129956081	.	-	.	ID=comp152767_c0_seq1.mrna1;geneID=comp152767_c0_seq1.path1;Name=comp152767_c0_seq1;Dir=indeterminatecoverage=96.8;identity=98.7;matches=1251;mismatches=1;indels=15;unknowns=0;Target=comp152767_c0_seq1 1289 32 .;CDS_Target=comp152767_c0_seq1 363 217 .;locus=RLOC_00021624
Chr2	stalkie_big_nohaplotig	exon	129954821	129956081	98	-	.	Parent=comp152767_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129955750	129955896	.	-	0	Parent=comp152767_c0_seq1.mrna1
Chr2	gffcl	locus	129966056	129966611	.	+	.	ID=RLOC_00021625;geneIDs=comp153024_c0_seq1.path1;transcripts=comp153024_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	129966056	129966611	.	+	.	ID=comp153024_c0_seq1.mrna1;geneID=comp153024_c0_seq1.path1;Name=comp153024_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=555;mismatches=1;indels=0;unknowns=0;Target=comp153024_c0_seq1 556 1 .;CDS_Target=comp153024_c0_seq1 59 3 .;locus=RLOC_00021625
Chr2	stalkie_big_nohaplotig	exon	129966056	129966611	99	+	.	Parent=comp153024_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	129966058	129966114	.	+	0	Parent=comp153024_c0_seq1.mrna1
Chr2	gffcl	locus	130129991	130134247	.	+	.	ID=RLOC_00021626;geneIDs=FBgn0011224.1.path1;transcripts=FBgn0011224.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130129991	130134247	.	+	.	ID=FBgn0011224.1.mrna1;geneID=FBgn0011224.1.path1;Name=FBgn0011224.1;Dir=sensecoverage=43.7;identity=100.0;matches=781;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021626
Chr2	stalkie_big_nohaplotig	exon	130129991	130130257	100	+	.	Parent=FBgn0011224.1.mrna1;Target=FBgn0011224.1 487 753 +
Chr2	stalkie_big_nohaplotig	exon	130130527	130130812	100	+	.	Parent=FBgn0011224.1.mrna1;Target=FBgn0011224.1 754 1039 +
Chr2	stalkie_big_nohaplotig	exon	130132838	130133031	100	+	.	Parent=FBgn0011224.1.mrna1;Target=FBgn0011224.1 1040 1233 +
Chr2	stalkie_big_nohaplotig	exon	130134214	130134247	100	+	.	Parent=FBgn0011224.1.mrna1;Target=FBgn0011224.1 1234 1267 +
Chr2	stalkie_big_nohaplotig	CDS	130129991	130130257	.	+	0	Parent=FBgn0011224.1.mrna1;Target=FBgn0011224.1 487 753 +
Chr2	stalkie_big_nohaplotig	CDS	130130527	130130812	.	+	0	Parent=FBgn0011224.1.mrna1;Target=FBgn0011224.1 754 1039 +
Chr2	stalkie_big_nohaplotig	CDS	130132838	130133031	.	+	2	Parent=FBgn0011224.1.mrna1;Target=FBgn0011224.1 1040 1233 +
Chr2	stalkie_big_nohaplotig	CDS	130134214	130134246	.	+	0	Parent=FBgn0011224.1.mrna1;Target=FBgn0011224.1 1234 1266 +
Chr2	gffcl	locus	130173472	130174879	.	-	.	ID=RLOC_00021627;geneIDs=comp160867_c0_seq1.path1;transcripts=comp160867_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130173472	130174879	.	-	.	ID=comp160867_c0_seq1.mrna1;geneID=comp160867_c0_seq1.path1;Name=comp160867_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.3;matches=1394;mismatches=14;indels=24;unknowns=0;Target=comp160867_c0_seq1 1433 2 .;CDS_Target=comp160867_c0_seq1 1348 1268 .;locus=RLOC_00021627
Chr2	stalkie_big_nohaplotig	exon	130173472	130174879	97	-	.	Parent=comp160867_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130173557	130173637	.	-	0	Parent=comp160867_c0_seq1.mrna1
Chr2	gffcl	locus	130176023	130177072	.	+	.	ID=RLOC_00021628;geneIDs=comp146585_c0_seq1.path1,comp258237_c0_seq1.path1;transcripts=comp146585_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130176023	130176811	.	+	.	ID=comp146585_c0_seq1.mrna1;geneID=comp146585_c0_seq1.path1;Name=comp146585_c0_seq1;Dir=indeterminatecoverage=95.3;identity=99.4;matches=787;mismatches=1;indels=4;unknowns=0;Target=comp146585_c0_seq1 818 28 .;CDS_Target=comp146585_c0_seq1 136 29 .;locus=RLOC_00021628
Chr2	stalkie_big_nohaplotig	exon	130176023	130176811	99	+	.	Parent=comp146585_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130176024	130176131	.	+	0	Parent=comp146585_c0_seq1.mrna1
Chr2	gffcl	locus	130182190	132117277	.	+	.	ID=RLOC_00021629;geneIDs=FBgn0003567.4.path1,comp162063_c1_seq1.path1,comp162243_c0_seq1.path1;transcripts=comp162063_c1_seq1.mrna1,comp162243_c0_seq1.mrna1,FBgn0003567.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130182190	132112066	.	+	.	ID=comp162063_c1_seq1.mrna1;geneID=comp162063_c1_seq1.path1;Name=comp162063_c1_seq1;Dir=indeterminatecoverage=58.6;identity=100.0;matches=651;mismatches=0;indels=0;unknowns=0;Target=comp162063_c1_seq1 112 2 .;locus=RLOC_00021629
Chr2	stalkie_big_nohaplotig	exon	130182190	130182813	100	+	.	Parent=comp162063_c1_seq1.mrna1;Target=comp162063_c1_seq1 624 1 .
Chr2	stalkie_big_nohaplotig	exon	132073337	132073343	100	+	.	Parent=comp162063_c1_seq1.mrna1;Target=comp162063_c1_seq1 631 625 .
Chr2	stalkie_big_nohaplotig	exon	132080260	132080261	100	+	.	Parent=comp162063_c1_seq1.mrna1;Target=comp162063_c1_seq1 633 632 .
Chr2	stalkie_big_nohaplotig	exon	132094924	132094927	100	+	.	Parent=comp162063_c1_seq1.mrna1;Target=comp162063_c1_seq1 637 634 .
Chr2	stalkie_big_nohaplotig	exon	132109049	132109057	100	+	.	Parent=comp162063_c1_seq1.mrna1;Target=comp162063_c1_seq1 646 638 .
Chr2	stalkie_big_nohaplotig	exon	132112062	132112066	100	+	.	Parent=comp162063_c1_seq1.mrna1;Target=comp162063_c1_seq1 651 647 .
Chr2	stalkie_big_nohaplotig	CDS	130182191	130182301	.	+	0	Parent=comp162063_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132111800	132117277	.	+	.	ID=comp162243_c0_seq1.mrna1;geneID=comp162243_c0_seq1.path1;Name=comp162243_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=1929;mismatches=13;indels=0;unknowns=0;locus=RLOC_00021629
Chr2	stalkie_big_nohaplotig	exon	132111800	132112557	99	+	.	Parent=comp162243_c0_seq1.mrna1;Target=comp162243_c0_seq1 1 758 +
Chr2	stalkie_big_nohaplotig	exon	132115633	132116368	98	+	.	Parent=comp162243_c0_seq1.mrna1;Target=comp162243_c0_seq1 759 1494 +
Chr2	stalkie_big_nohaplotig	exon	132116436	132116568	99	+	.	Parent=comp162243_c0_seq1.mrna1;Target=comp162243_c0_seq1 1495 1627 +
Chr2	stalkie_big_nohaplotig	exon	132116628	132116711	100	+	.	Parent=comp162243_c0_seq1.mrna1;Target=comp162243_c0_seq1 1628 1711 +
Chr2	stalkie_big_nohaplotig	exon	132116771	132116854	100	+	.	Parent=comp162243_c0_seq1.mrna1;Target=comp162243_c0_seq1 1712 1795 +
Chr2	stalkie_big_nohaplotig	exon	132116929	132116975	100	+	.	Parent=comp162243_c0_seq1.mrna1;Target=comp162243_c0_seq1 1796 1842 +
Chr2	stalkie_big_nohaplotig	exon	132117119	132117155	97	+	.	Parent=comp162243_c0_seq1.mrna1;Target=comp162243_c0_seq1 1843 1879 +
Chr2	stalkie_big_nohaplotig	exon	132117215	132117277	100	+	.	Parent=comp162243_c0_seq1.mrna1;Target=comp162243_c0_seq1 1880 1942 +
Chr2	stalkie_big_nohaplotig	CDS	132112503	132112557	.	+	0	Parent=comp162243_c0_seq1.mrna1;Target=comp162243_c0_seq1 704 758 +
Chr2	stalkie_big_nohaplotig	CDS	132115633	132116368	.	+	2	Parent=comp162243_c0_seq1.mrna1;Target=comp162243_c0_seq1 759 1494 +
Chr2	stalkie_big_nohaplotig	CDS	132116436	132116568	.	+	1	Parent=comp162243_c0_seq1.mrna1;Target=comp162243_c0_seq1 1495 1627 +
Chr2	stalkie_big_nohaplotig	CDS	132116628	132116711	.	+	0	Parent=comp162243_c0_seq1.mrna1;Target=comp162243_c0_seq1 1628 1711 +
Chr2	stalkie_big_nohaplotig	CDS	132116771	132116854	.	+	0	Parent=comp162243_c0_seq1.mrna1;Target=comp162243_c0_seq1 1712 1795 +
Chr2	stalkie_big_nohaplotig	CDS	132116929	132116975	.	+	0	Parent=comp162243_c0_seq1.mrna1;Target=comp162243_c0_seq1 1796 1842 +
Chr2	stalkie_big_nohaplotig	CDS	132117119	132117155	.	+	1	Parent=comp162243_c0_seq1.mrna1;Target=comp162243_c0_seq1 1843 1879 +
Chr2	stalkie_big_nohaplotig	CDS	132117215	132117277	.	+	0	Parent=comp162243_c0_seq1.mrna1;Target=comp162243_c0_seq1 1880 1942 +
Chr2	stalkie_big_nohaplotig	mRNA	132114499	132117277	.	+	.	ID=FBgn0003567.4.mrna1;geneID=FBgn0003567.4.path1;Name=FBgn0003567.4;Dir=sensecoverage=100.0;identity=99.3;matches=1761;mismatches=12;indels=0;unknowns=0;locus=RLOC_00021629
Chr2	stalkie_big_nohaplotig	exon	132114499	132114582	100	+	.	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 1 84 +
Chr2	stalkie_big_nohaplotig	exon	132114641	132114724	100	+	.	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 85 168 +
Chr2	stalkie_big_nohaplotig	exon	132114789	132114872	100	+	.	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 169 252 +
Chr2	stalkie_big_nohaplotig	exon	132114930	132115120	100	+	.	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 253 443 +
Chr2	stalkie_big_nohaplotig	exon	132115176	132115321	99	+	.	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 444 589 +
Chr2	stalkie_big_nohaplotig	exon	132115633	132116368	98	+	.	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 590 1325 +
Chr2	stalkie_big_nohaplotig	exon	132116436	132116568	99	+	.	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 1326 1458 +
Chr2	stalkie_big_nohaplotig	exon	132116628	132116711	100	+	.	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 1459 1542 +
Chr2	stalkie_big_nohaplotig	exon	132116771	132116854	100	+	.	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 1543 1626 +
Chr2	stalkie_big_nohaplotig	exon	132116929	132116975	100	+	.	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 1627 1673 +
Chr2	stalkie_big_nohaplotig	exon	132117119	132117155	97	+	.	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 1674 1710 +
Chr2	stalkie_big_nohaplotig	exon	132117215	132117277	100	+	.	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 1711 1773 +
Chr2	stalkie_big_nohaplotig	CDS	132114499	132114582	.	+	0	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	132114641	132114724	.	+	0	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 85 168 +
Chr2	stalkie_big_nohaplotig	CDS	132114789	132114872	.	+	0	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 169 252 +
Chr2	stalkie_big_nohaplotig	CDS	132114930	132115120	.	+	0	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 253 443 +
Chr2	stalkie_big_nohaplotig	CDS	132115176	132115321	.	+	1	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 444 589 +
Chr2	stalkie_big_nohaplotig	CDS	132115633	132116368	.	+	2	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 590 1325 +
Chr2	stalkie_big_nohaplotig	CDS	132116436	132116568	.	+	1	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 1326 1458 +
Chr2	stalkie_big_nohaplotig	CDS	132116628	132116711	.	+	0	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 1459 1542 +
Chr2	stalkie_big_nohaplotig	CDS	132116771	132116854	.	+	0	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 1543 1626 +
Chr2	stalkie_big_nohaplotig	CDS	132116929	132116975	.	+	0	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 1627 1673 +
Chr2	stalkie_big_nohaplotig	CDS	132117119	132117155	.	+	1	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 1674 1710 +
Chr2	stalkie_big_nohaplotig	CDS	132117215	132117277	.	+	0	Parent=FBgn0003567.4.mrna1;Target=FBgn0003567.4 1711 1773 +
Chr2	gffcl	locus	130183223	130184231	.	+	.	ID=RLOC_00021630;geneIDs=comp154992_c0_seq1.path1;transcripts=comp154992_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130183223	130184231	.	+	.	ID=comp154992_c0_seq1.mrna1;geneID=comp154992_c0_seq1.path1;Name=comp154992_c0_seq1;Dir=indeterminatecoverage=98.2;identity=99.7;matches=1006;mismatches=3;indels=0;unknowns=0;Target=comp154992_c0_seq1 1027 19 .;CDS_Target=comp154992_c0_seq1 814 710 .;locus=RLOC_00021630
Chr2	stalkie_big_nohaplotig	exon	130183223	130184231	99	+	.	Parent=comp154992_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130183914	130184018	.	+	0	Parent=comp154992_c0_seq1.mrna1
Chr2	gffcl	locus	130184326	130185381	.	+	.	ID=RLOC_00021631;geneIDs=comp160113_c0_seq1.path1;transcripts=comp160113_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130184326	130185381	.	+	.	ID=comp160113_c0_seq1.mrna1;geneID=comp160113_c0_seq1.path1;Name=comp160113_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=1056;mismatches=0;indels=0;unknowns=0;Target=comp160113_c0_seq1 1056 1 .;CDS_Target=comp160113_c0_seq1 535 413 .;locus=RLOC_00021631
Chr2	stalkie_big_nohaplotig	exon	130184326	130185381	100	+	.	Parent=comp160113_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130184738	130184860	.	+	0	Parent=comp160113_c0_seq1.mrna1
Chr2	gffcl	locus	130227582	132081421	.	.	.	ID=RLOC_00021632;geneIDs=comp121458_c0_seq1.path1,comp160330_c0_seq1.path1,comp160751_c1_seq1.path1,comp160896_c1_seq1.path1,comp161271_c2_seq1.path1;transcripts=comp160751_c1_seq1.mrna1,comp160330_c0_seq1.mrna1,comp161271_c2_seq1.mrna1,comp160896_c1_seq1.mrna1,comp121458_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130227582	132081421	.	+	.	ID=comp160751_c1_seq1.mrna1;geneID=comp160751_c1_seq1.path1;Name=comp160751_c1_seq1;Dir=antisensecoverage=89.8;identity=89.4;matches=1815;mismatches=114;indels=102;unknowns=0;locus=RLOC_00021632
Chr2	stalkie_big_nohaplotig	exon	130227582	130227601	63	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 2091 2120 -
Chr2	stalkie_big_nohaplotig	exon	130230779	130230785	100	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 2084 2090 -
Chr2	stalkie_big_nohaplotig	exon	130234427	130234431	100	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 2075 2079 -
Chr2	stalkie_big_nohaplotig	exon	130237551	130237567	64	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 2064 2074 -
Chr2	stalkie_big_nohaplotig	exon	130242033	130242044	83	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 2047 2058 -
Chr2	stalkie_big_nohaplotig	exon	130254238	130254246	100	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 2038 2046 -
Chr2	stalkie_big_nohaplotig	exon	130256768	130256778	41	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 2014 2037 -
Chr2	stalkie_big_nohaplotig	exon	130268086	130268093	100	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 2004 2011 -
Chr2	stalkie_big_nohaplotig	exon	130268100	130268107	100	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1988 1995 -
Chr2	stalkie_big_nohaplotig	exon	130272555	130272605	40	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1896 1987 -
Chr2	stalkie_big_nohaplotig	exon	130275889	130275932	52	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1858 1895 -
Chr2	stalkie_big_nohaplotig	exon	130300327	130300356	60	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1839 1857 -
Chr2	stalkie_big_nohaplotig	exon	130305094	130305096	100	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1836 1838 -
Chr2	stalkie_big_nohaplotig	exon	130306756	130306764	100	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1827 1835 -
Chr2	stalkie_big_nohaplotig	exon	130311096	130311111	87	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1811 1826 -
Chr2	stalkie_big_nohaplotig	exon	130315200	130315205	100	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1805 1810 -
Chr2	stalkie_big_nohaplotig	exon	130321465	130321473	100	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1796 1804 -
Chr2	stalkie_big_nohaplotig	exon	130322438	130322457	51	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1769 1795 -
Chr2	stalkie_big_nohaplotig	exon	130325524	130325532	100	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1729 1737 -
Chr2	stalkie_big_nohaplotig	exon	130339980	130339992	92	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1713 1725 -
Chr2	stalkie_big_nohaplotig	exon	130351205	130351216	83	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1701 1712 -
Chr2	stalkie_big_nohaplotig	exon	130354827	130354833	100	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1694 1700 -
Chr2	stalkie_big_nohaplotig	exon	130368214	130368215	100	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1692 1693 -
Chr2	stalkie_big_nohaplotig	exon	130518545	130518556	100	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1644 1655 -
Chr2	stalkie_big_nohaplotig	exon	130522267	130522271	100	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1639 1643 -
Chr2	stalkie_big_nohaplotig	exon	130526020	130526021	100	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1637 1638 -
Chr2	stalkie_big_nohaplotig	exon	130530142	130530146	100	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1632 1636 -
Chr2	stalkie_big_nohaplotig	exon	130536692	130536701	100	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1621 1630 -
Chr2	stalkie_big_nohaplotig	exon	130704987	130704991	100	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1616 1620 -
Chr2	stalkie_big_nohaplotig	exon	132041409	132041452	75	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1572 1615 -
Chr2	stalkie_big_nohaplotig	exon	132063437	132063515	73	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1493 1571 -
Chr2	stalkie_big_nohaplotig	exon	132063887	132063945	76	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1404 1462 -
Chr2	stalkie_big_nohaplotig	exon	132064300	132064383	96	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1320 1403 -
Chr2	stalkie_big_nohaplotig	exon	132079206	132079289	97	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1236 1319 -
Chr2	stalkie_big_nohaplotig	exon	132079349	132079432	100	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1152 1235 -
Chr2	stalkie_big_nohaplotig	exon	132079857	132079940	100	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1068 1151 -
Chr2	stalkie_big_nohaplotig	exon	132079997	132080080	100	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 984 1067 -
Chr2	stalkie_big_nohaplotig	exon	132080140	132080223	100	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 900 983 -
Chr2	stalkie_big_nohaplotig	exon	132080283	132080364	98	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 818 899 -
Chr2	stalkie_big_nohaplotig	exon	132080434	132080726	99	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 525 817 -
Chr2	stalkie_big_nohaplotig	exon	132080894	132081421	95	+	.	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1 524 -
Chr2	stalkie_big_nohaplotig	CDS	132063904	132063945	.	+	0	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1404 1445 .
Chr2	stalkie_big_nohaplotig	CDS	132064300	132064383	.	+	0	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1320 1403 .
Chr2	stalkie_big_nohaplotig	CDS	132079206	132079289	.	+	0	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1236 1319 .
Chr2	stalkie_big_nohaplotig	CDS	132079349	132079432	.	+	0	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1152 1235 .
Chr2	stalkie_big_nohaplotig	CDS	132079857	132079940	.	+	0	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 1068 1151 .
Chr2	stalkie_big_nohaplotig	CDS	132079997	132080080	.	+	0	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 984 1067 .
Chr2	stalkie_big_nohaplotig	CDS	132080140	132080223	.	+	0	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 900 983 .
Chr2	stalkie_big_nohaplotig	CDS	132080283	132080364	.	+	0	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 818 899 .
Chr2	stalkie_big_nohaplotig	CDS	132080434	132080456	.	+	2	Parent=comp160751_c1_seq1.mrna1;Target=comp160751_c1_seq1 795 817 .
Chr2	stalkie_big_nohaplotig	mRNA	130515994	130519331	.	+	.	ID=comp160330_c0_seq1.mrna1;geneID=comp160330_c0_seq1.path1;Name=comp160330_c0_seq1;Dir=sensecoverage=100.0;identity=98.9;matches=2203;mismatches=6;indels=19;unknowns=0;locus=RLOC_00021632
Chr2	stalkie_big_nohaplotig	exon	130515994	130516458	100	+	.	Parent=comp160330_c0_seq1.mrna1;Target=comp160330_c0_seq1 1 465 +
Chr2	stalkie_big_nohaplotig	exon	130516649	130517002	93	+	.	Parent=comp160330_c0_seq1.mrna1;Target=comp160330_c0_seq1 466 825 +
Chr2	stalkie_big_nohaplotig	exon	130517057	130517104	100	+	.	Parent=comp160330_c0_seq1.mrna1;Target=comp160330_c0_seq1 826 873 +
Chr2	stalkie_big_nohaplotig	exon	130517859	130518419	100	+	.	Parent=comp160330_c0_seq1.mrna1;Target=comp160330_c0_seq1 874 1434 +
Chr2	stalkie_big_nohaplotig	exon	130518480	130518710	99	+	.	Parent=comp160330_c0_seq1.mrna1;Target=comp160330_c0_seq1 1435 1666 +
Chr2	stalkie_big_nohaplotig	exon	130518776	130519331	100	+	.	Parent=comp160330_c0_seq1.mrna1;Target=comp160330_c0_seq1 1667 2222 +
Chr2	stalkie_big_nohaplotig	CDS	130516245	130516458	.	+	0	Parent=comp160330_c0_seq1.mrna1;Target=comp160330_c0_seq1 252 465 +
Chr2	stalkie_big_nohaplotig	CDS	130516649	130517002	.	+	2	Parent=comp160330_c0_seq1.mrna1;Target=comp160330_c0_seq1 466 825 +
Chr2	stalkie_big_nohaplotig	CDS	130517057	130517104	.	+	2	Parent=comp160330_c0_seq1.mrna1;Target=comp160330_c0_seq1 826 873 +
Chr2	stalkie_big_nohaplotig	CDS	130517859	130518419	.	+	2	Parent=comp160330_c0_seq1.mrna1;Target=comp160330_c0_seq1 874 1434 +
Chr2	stalkie_big_nohaplotig	CDS	130518480	130518666	.	+	2	Parent=comp160330_c0_seq1.mrna1;Target=comp160330_c0_seq1 1435 1622 +
Chr2	stalkie_big_nohaplotig	mRNA	130522185	130572951	.	-	.	ID=comp161271_c2_seq1.mrna1;geneID=comp161271_c2_seq1.path1;Name=comp161271_c2_seq1;Dir=antisensecoverage=96.8;identity=99.9;matches=5284;mismatches=4;indels=1;unknowns=0;locus=RLOC_00021632
Chr2	stalkie_big_nohaplotig	exon	130522185	130522190	100	-	.	Parent=comp161271_c2_seq1.mrna1;Target=comp161271_c2_seq1 178 183 -
Chr2	stalkie_big_nohaplotig	exon	130526025	130528337	99	-	.	Parent=comp161271_c2_seq1.mrna1;Target=comp161271_c2_seq1 184 2496 -
Chr2	stalkie_big_nohaplotig	exon	130569982	130572951	99	-	.	Parent=comp161271_c2_seq1.mrna1;Target=comp161271_c2_seq1 2497 5465 -
Chr2	stalkie_big_nohaplotig	CDS	130526301	130528337	.	-	0	Parent=comp161271_c2_seq1.mrna1;Target=comp161271_c2_seq1 460 2496 .
Chr2	stalkie_big_nohaplotig	CDS	130569982	130572156	.	-	0	Parent=comp161271_c2_seq1.mrna1;Target=comp161271_c2_seq1 2497 4671 .
Chr2	stalkie_big_nohaplotig	mRNA	130522191	130523434	.	+	.	ID=comp160896_c1_seq1.mrna1;geneID=comp160896_c1_seq1.path1;Name=comp160896_c1_seq1;Dir=indeterminatecoverage=95.9;identity=98.9;matches=1230;mismatches=3;indels=11;unknowns=0;Target=comp160896_c1_seq1 1286 54 .;CDS_Target=comp160896_c1_seq1 682 584 .;locus=RLOC_00021632
Chr2	stalkie_big_nohaplotig	exon	130522191	130523434	98	+	.	Parent=comp160896_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130522721	130522819	.	+	0	Parent=comp160896_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130525025	130526035	.	-	.	ID=comp121458_c0_seq1.mrna1;geneID=comp121458_c0_seq1.path1;Name=comp121458_c0_seq1;Dir=indeterminatecoverage=96.5;identity=99.3;matches=1005;mismatches=1;indels=6;unknowns=0;Target=comp121458_c0_seq1 1044 38 .;CDS_Target=comp121458_c0_seq1 60 40 .;locus=RLOC_00021632
Chr2	stalkie_big_nohaplotig	exon	130525025	130526035	99	-	.	Parent=comp121458_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130526011	130526033	.	-	0	Parent=comp121458_c0_seq1.mrna1
Chr2	gffcl	locus	130270691	130272502	.	-	.	ID=RLOC_00021633;geneIDs=FBgn0003495.1.path1,comp146891_c0_seq1.path1;transcripts=FBgn0003495.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130270691	130271882	.	-	.	ID=FBgn0003495.1.mrna1;geneID=FBgn0003495.1.path1;Name=FBgn0003495.1;Dir=sensecoverage=89.3;identity=99.2;matches=980;mismatches=8;indels=0;unknowns=0;locus=RLOC_00021633
Chr2	stalkie_big_nohaplotig	exon	130270691	130270862	99	-	.	Parent=FBgn0003495.1.mrna1;Target=FBgn0003495.1 936 1107 +
Chr2	stalkie_big_nohaplotig	exon	130270924	130271269	98	-	.	Parent=FBgn0003495.1.mrna1;Target=FBgn0003495.1 590 935 +
Chr2	stalkie_big_nohaplotig	exon	130271328	130271523	99	-	.	Parent=FBgn0003495.1.mrna1;Target=FBgn0003495.1 394 589 +
Chr2	stalkie_big_nohaplotig	exon	130271609	130271882	99	-	.	Parent=FBgn0003495.1.mrna1;Target=FBgn0003495.1 120 393 +
Chr2	stalkie_big_nohaplotig	CDS	130270691	130270862	.	-	1	Parent=FBgn0003495.1.mrna1;Target=FBgn0003495.1 936 1107 +
Chr2	stalkie_big_nohaplotig	CDS	130270924	130271269	.	-	2	Parent=FBgn0003495.1.mrna1;Target=FBgn0003495.1 590 935 +
Chr2	stalkie_big_nohaplotig	CDS	130271328	130271523	.	-	0	Parent=FBgn0003495.1.mrna1;Target=FBgn0003495.1 394 589 +
Chr2	stalkie_big_nohaplotig	CDS	130271609	130271881	.	-	0	Parent=FBgn0003495.1.mrna1;Target=FBgn0003495.1 121 393 +
Chr2	gffcl	locus	130272622	130273660	.	-	.	ID=RLOC_00021634;geneIDs=comp154685_c0_seq1.path1;transcripts=comp154685_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130272622	130273660	.	-	.	ID=comp154685_c0_seq1.mrna1;geneID=comp154685_c0_seq1.path1;Name=comp154685_c0_seq1;Dir=indeterminatecoverage=99.9;identity=86.0;matches=956;mismatches=83;indels=72;unknowns=0;Target=comp154685_c0_seq1 1112 2 .;CDS_Target=comp154685_c0_seq1 643 470 .;locus=RLOC_00021634
Chr2	stalkie_big_nohaplotig	exon	130272622	130273660	86	-	.	Parent=comp154685_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130273084	130273197	.	-	0	Parent=comp154685_c0_seq1.mrna1
Chr2	gffcl	locus	130273902	130274341	.	-	.	ID=RLOC_00021635;geneIDs=comp157470_c1_seq1.path1;transcripts=comp157470_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130273902	130274341	.	-	.	ID=comp157470_c1_seq1.mrna1;geneID=comp157470_c1_seq1.path1;Name=comp157470_c1_seq1;Dir=indeterminatecoverage=99.8;identity=97.5;matches=429;mismatches=11;indels=0;unknowns=0;Target=comp157470_c1_seq1 440 1 .;CDS_Target=comp157470_c1_seq1 93 1 .;locus=RLOC_00021635
Chr2	stalkie_big_nohaplotig	exon	130273902	130274341	97	-	.	Parent=comp157470_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130274249	130274341	.	-	0	Parent=comp157470_c1_seq1.mrna1
Chr2	gffcl	locus	130340897	130341845	.	+	.	ID=RLOC_00021636;geneIDs=comp147296_c1_seq1.path1;transcripts=comp147296_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130340897	130341845	.	+	.	ID=comp147296_c1_seq1.mrna1;geneID=comp147296_c1_seq1.path1;Name=comp147296_c1_seq1;Dir=indeterminatecoverage=99.9;identity=90.4;matches=877;mismatches=30;indels=63;unknowns=0;Target=comp147296_c1_seq1 929 2 .;CDS_Target=comp147296_c1_seq1 929 708 .;locus=RLOC_00021636
Chr2	stalkie_big_nohaplotig	exon	130340897	130341845	90	+	.	Parent=comp147296_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130341624	130341845	.	+	0	Parent=comp147296_c1_seq1.mrna1
Chr2	gffcl	locus	130348100	130348501	.	+	.	ID=RLOC_00021637;geneIDs=comp158879_c0_seq1.path1;transcripts=comp158879_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130348100	130348501	.	+	.	ID=comp158879_c0_seq1.mrna1;geneID=comp158879_c0_seq1.path1;Name=comp158879_c0_seq1;Dir=indeterminatecoverage=9.3;identity=98.8;matches=397;mismatches=5;indels=0;unknowns=0;Target=comp158879_c0_seq1 402 1 .;CDS_Target=comp158879_c0_seq1 402 205 .;locus=RLOC_00021637
Chr2	stalkie_big_nohaplotig	exon	130348100	130348501	98	+	.	Parent=comp158879_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130348304	130348501	.	+	0	Parent=comp158879_c0_seq1.mrna1
Chr2	gffcl	locus	130456467	130457594	.	+	.	ID=RLOC_00021638;geneIDs=Dv_FBgn0211544.2.path1;transcripts=Dv_FBgn0211544.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130456467	130457594	.	+	.	ID=Dv_FBgn0211544.2.mrna1;geneID=Dv_FBgn0211544.2.path1;Name=Dv_FBgn0211544.2;Dir=sensecoverage=100.0;identity=100.0;matches=909;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021638
Chr2	stalkie_big_nohaplotig	exon	130456467	130456542	100	+	.	Parent=Dv_FBgn0211544.2.mrna1;Target=Dv_FBgn0211544.2 1 76 +
Chr2	stalkie_big_nohaplotig	exon	130456614	130456646	100	+	.	Parent=Dv_FBgn0211544.2.mrna1;Target=Dv_FBgn0211544.2 77 109 +
Chr2	stalkie_big_nohaplotig	exon	130456718	130456958	100	+	.	Parent=Dv_FBgn0211544.2.mrna1;Target=Dv_FBgn0211544.2 110 350 +
Chr2	stalkie_big_nohaplotig	exon	130457036	130457594	100	+	.	Parent=Dv_FBgn0211544.2.mrna1;Target=Dv_FBgn0211544.2 351 909 +
Chr2	stalkie_big_nohaplotig	CDS	130456467	130456542	.	+	0	Parent=Dv_FBgn0211544.2.mrna1;Target=Dv_FBgn0211544.2 1 76 +
Chr2	stalkie_big_nohaplotig	CDS	130456614	130456646	.	+	2	Parent=Dv_FBgn0211544.2.mrna1;Target=Dv_FBgn0211544.2 77 109 +
Chr2	stalkie_big_nohaplotig	CDS	130456718	130456958	.	+	2	Parent=Dv_FBgn0211544.2.mrna1;Target=Dv_FBgn0211544.2 110 350 +
Chr2	stalkie_big_nohaplotig	CDS	130457036	130457594	.	+	1	Parent=Dv_FBgn0211544.2.mrna1;Target=Dv_FBgn0211544.2 351 909 +
Chr2	gffcl	locus	130458932	130459925	.	+	.	ID=RLOC_00021639;geneIDs=Dp_FBgn0248630.1.path1,comp153423_c0_seq1.path1;transcripts=comp153423_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130458932	130459925	.	+	.	ID=comp153423_c0_seq1.mrna1;geneID=comp153423_c0_seq1.path1;Name=comp153423_c0_seq1;Dir=sensecoverage=96.1;identity=99.4;matches=870;mismatches=4;indels=1;unknowns=0;locus=RLOC_00021639
Chr2	stalkie_big_nohaplotig	exon	130458932	130459008	100	+	.	Parent=comp153423_c0_seq1.mrna1;Target=comp153423_c0_seq1 36 112 +
Chr2	stalkie_big_nohaplotig	exon	130459068	130459236	99	+	.	Parent=comp153423_c0_seq1.mrna1;Target=comp153423_c0_seq1 113 281 +
Chr2	stalkie_big_nohaplotig	exon	130459297	130459925	99	+	.	Parent=comp153423_c0_seq1.mrna1;Target=comp153423_c0_seq1 282 909 +
Chr2	stalkie_big_nohaplotig	CDS	130458933	130459008	.	+	0	Parent=comp153423_c0_seq1.mrna1;Target=comp153423_c0_seq1 37 112 +
Chr2	stalkie_big_nohaplotig	CDS	130459068	130459236	.	+	2	Parent=comp153423_c0_seq1.mrna1;Target=comp153423_c0_seq1 113 281 +
Chr2	stalkie_big_nohaplotig	CDS	130459297	130459852	.	+	1	Parent=comp153423_c0_seq1.mrna1;Target=comp153423_c0_seq1 282 837 +
Chr2	gffcl	locus	130461689	130462642	.	+	.	ID=RLOC_00021640;geneIDs=Dv_FBgn0209903.1.path1;transcripts=Dv_FBgn0209903.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130461689	130462642	.	+	.	ID=Dv_FBgn0209903.1.mrna1;geneID=Dv_FBgn0209903.1.path1;Name=Dv_FBgn0209903.1;Dir=sensecoverage=100.0;identity=99.9;matches=821;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021640
Chr2	stalkie_big_nohaplotig	exon	130461689	130461773	100	+	.	Parent=Dv_FBgn0209903.1.mrna1;Target=Dv_FBgn0209903.1 1 85 +
Chr2	stalkie_big_nohaplotig	exon	130461837	130462017	100	+	.	Parent=Dv_FBgn0209903.1.mrna1;Target=Dv_FBgn0209903.1 86 266 +
Chr2	stalkie_big_nohaplotig	exon	130462087	130462642	99	+	.	Parent=Dv_FBgn0209903.1.mrna1;Target=Dv_FBgn0209903.1 267 822 +
Chr2	stalkie_big_nohaplotig	CDS	130461689	130461773	.	+	0	Parent=Dv_FBgn0209903.1.mrna1;Target=Dv_FBgn0209903.1 1 85 +
Chr2	stalkie_big_nohaplotig	CDS	130461837	130462017	.	+	2	Parent=Dv_FBgn0209903.1.mrna1;Target=Dv_FBgn0209903.1 86 266 +
Chr2	stalkie_big_nohaplotig	CDS	130462087	130462642	.	+	1	Parent=Dv_FBgn0209903.1.mrna1;Target=Dv_FBgn0209903.1 267 822 +
Chr2	gffcl	locus	130465938	130466924	.	+	.	ID=RLOC_00021641;geneIDs=Dv_FBgn0211544.1.path1;transcripts=Dv_FBgn0211544.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130465938	130466924	.	+	.	ID=Dv_FBgn0211544.1.mrna1;geneID=Dv_FBgn0211544.1.path1;Name=Dv_FBgn0211544.1;Dir=sensecoverage=100.0;identity=100.0;matches=867;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021641
Chr2	stalkie_big_nohaplotig	exon	130465938	130466079	100	+	.	Parent=Dv_FBgn0211544.1.mrna1;Target=Dv_FBgn0211544.1 1 142 +
Chr2	stalkie_big_nohaplotig	exon	130466138	130466318	100	+	.	Parent=Dv_FBgn0211544.1.mrna1;Target=Dv_FBgn0211544.1 143 323 +
Chr2	stalkie_big_nohaplotig	exon	130466381	130466924	100	+	.	Parent=Dv_FBgn0211544.1.mrna1;Target=Dv_FBgn0211544.1 324 867 +
Chr2	stalkie_big_nohaplotig	CDS	130465938	130466079	.	+	0	Parent=Dv_FBgn0211544.1.mrna1;Target=Dv_FBgn0211544.1 1 142 +
Chr2	stalkie_big_nohaplotig	CDS	130466138	130466318	.	+	2	Parent=Dv_FBgn0211544.1.mrna1;Target=Dv_FBgn0211544.1 143 323 +
Chr2	stalkie_big_nohaplotig	CDS	130466381	130466924	.	+	1	Parent=Dv_FBgn0211544.1.mrna1;Target=Dv_FBgn0211544.1 324 867 +
Chr2	gffcl	locus	130468988	130469740	.	+	.	ID=RLOC_00021642;geneIDs=Dv_FBgn0209903.2.path1,comp155201_c0_seq1.path1;transcripts=comp155201_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130468988	130469740	.	+	.	ID=comp155201_c0_seq1.mrna1;geneID=comp155201_c0_seq1.path1;Name=comp155201_c0_seq1;Dir=antisensecoverage=100.0;identity=99.1;matches=626;mismatches=6;indels=0;unknowns=0;locus=RLOC_00021642
Chr2	stalkie_big_nohaplotig	exon	130468988	130469077	97	+	.	Parent=comp155201_c0_seq1.mrna1;Target=comp155201_c0_seq1 543 632 -
Chr2	stalkie_big_nohaplotig	exon	130469140	130469320	99	+	.	Parent=comp155201_c0_seq1.mrna1;Target=comp155201_c0_seq1 362 542 -
Chr2	stalkie_big_nohaplotig	exon	130469380	130469740	99	+	.	Parent=comp155201_c0_seq1.mrna1;Target=comp155201_c0_seq1 1 361 -
Chr2	stalkie_big_nohaplotig	CDS	130469017	130469077	.	+	0	Parent=comp155201_c0_seq1.mrna1;Target=comp155201_c0_seq1 543 603 .
Chr2	stalkie_big_nohaplotig	CDS	130469140	130469320	.	+	2	Parent=comp155201_c0_seq1.mrna1;Target=comp155201_c0_seq1 362 542 .
Chr2	stalkie_big_nohaplotig	CDS	130469380	130469740	.	+	1	Parent=comp155201_c0_seq1.mrna1;Target=comp155201_c0_seq1 1 361 .
Chr2	gffcl	locus	130471677	130472623	.	+	.	ID=RLOC_00021643;geneIDs=Dv_FBgn0209903.4.path1;transcripts=Dv_FBgn0209903.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130471677	130472623	.	+	.	ID=Dv_FBgn0209903.4.mrna1;geneID=Dv_FBgn0209903.4.path1;Name=Dv_FBgn0209903.4;Dir=sensecoverage=97.6;identity=99.6;matches=826;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021643
Chr2	stalkie_big_nohaplotig	exon	130471677	130471774	100	+	.	Parent=Dv_FBgn0209903.4.mrna1;Target=Dv_FBgn0209903.4 21 118 +
Chr2	stalkie_big_nohaplotig	exon	130471834	130472014	98	+	.	Parent=Dv_FBgn0209903.4.mrna1;Target=Dv_FBgn0209903.4 119 299 +
Chr2	stalkie_big_nohaplotig	exon	130472074	130472623	99	+	.	Parent=Dv_FBgn0209903.4.mrna1;Target=Dv_FBgn0209903.4 300 849 +
Chr2	stalkie_big_nohaplotig	CDS	130471678	130471774	.	+	0	Parent=Dv_FBgn0209903.4.mrna1;Target=Dv_FBgn0209903.4 22 118 +
Chr2	stalkie_big_nohaplotig	CDS	130471834	130472014	.	+	2	Parent=Dv_FBgn0209903.4.mrna1;Target=Dv_FBgn0209903.4 119 299 +
Chr2	stalkie_big_nohaplotig	CDS	130472074	130472623	.	+	1	Parent=Dv_FBgn0209903.4.mrna1;Target=Dv_FBgn0209903.4 300 849 +
Chr2	gffcl	locus	130477953	130478940	.	+	.	ID=RLOC_00021644;geneIDs=Dv_FBgn0209903.3.path1;transcripts=Dv_FBgn0209903.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130477953	130478940	.	+	.	ID=Dv_FBgn0209903.3.mrna1;geneID=Dv_FBgn0209903.3.path1;Name=Dv_FBgn0209903.3;Dir=sensecoverage=100.0;identity=98.8;matches=836;mismatches=10;indels=0;unknowns=0;locus=RLOC_00021644
Chr2	stalkie_big_nohaplotig	exon	130477953	130478067	96	+	.	Parent=Dv_FBgn0209903.3.mrna1;Target=Dv_FBgn0209903.3 1 115 +
Chr2	stalkie_big_nohaplotig	exon	130478146	130478332	98	+	.	Parent=Dv_FBgn0209903.3.mrna1;Target=Dv_FBgn0209903.3 116 302 +
Chr2	stalkie_big_nohaplotig	exon	130478397	130478940	99	+	.	Parent=Dv_FBgn0209903.3.mrna1;Target=Dv_FBgn0209903.3 303 846 +
Chr2	stalkie_big_nohaplotig	CDS	130477953	130478067	.	+	0	Parent=Dv_FBgn0209903.3.mrna1;Target=Dv_FBgn0209903.3 1 115 +
Chr2	stalkie_big_nohaplotig	CDS	130478146	130478332	.	+	2	Parent=Dv_FBgn0209903.3.mrna1;Target=Dv_FBgn0209903.3 116 302 +
Chr2	stalkie_big_nohaplotig	CDS	130478397	130478940	.	+	1	Parent=Dv_FBgn0209903.3.mrna1;Target=Dv_FBgn0209903.3 303 846 +
Chr2	gffcl	locus	130493722	130502988	.	-	.	ID=RLOC_00021645;geneIDs=FBgn0040206.1.path1;transcripts=FBgn0040206.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130493722	130502988	.	-	.	ID=FBgn0040206.1.mrna1;geneID=FBgn0040206.1.path1;Name=FBgn0040206.1;Dir=sensecoverage=100.0;identity=100.0;matches=1407;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021645
Chr2	stalkie_big_nohaplotig	exon	130493722	130494554	100	-	.	Parent=FBgn0040206.1.mrna1;Target=FBgn0040206.1 575 1407 +
Chr2	stalkie_big_nohaplotig	exon	130502415	130502988	100	-	.	Parent=FBgn0040206.1.mrna1;Target=FBgn0040206.1 1 574 +
Chr2	stalkie_big_nohaplotig	CDS	130493722	130494554	.	-	2	Parent=FBgn0040206.1.mrna1;Target=FBgn0040206.1 575 1407 +
Chr2	stalkie_big_nohaplotig	CDS	130502415	130502988	.	-	0	Parent=FBgn0040206.1.mrna1;Target=FBgn0040206.1 1 574 +
Chr2	gffcl	locus	130501681	130502351	.	-	.	ID=RLOC_00021646;geneIDs=comp149584_c0_seq1.path1;transcripts=comp149584_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130501681	130502351	.	-	.	ID=comp149584_c0_seq1.mrna1;geneID=comp149584_c0_seq1.path1;Name=comp149584_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=669;mismatches=2;indels=1;unknowns=0;Target=comp149584_c0_seq1 672 1 .;CDS_Target=comp149584_c0_seq1 429 241 .;locus=RLOC_00021646
Chr2	stalkie_big_nohaplotig	exon	130501681	130502351	99	-	.	Parent=comp149584_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130501924	130502111	.	-	0	Parent=comp149584_c0_seq1.mrna1
Chr2	gffcl	locus	130505504	130507660	.	+	.	ID=RLOC_00021647;geneIDs=FBgn0261268.3.path1;transcripts=FBgn0261268.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130505504	130507660	.	+	.	ID=FBgn0261268.3.mrna1;geneID=FBgn0261268.3.path1;Name=FBgn0261268.3;Dir=indeterminatecoverage=100.0;identity=99.4;matches=2144;mismatches=13;indels=0;unknowns=0;Target=FBgn0261268.3 2157 1 .;locus=RLOC_00021647
Chr2	stalkie_big_nohaplotig	exon	130505504	130507660	99	+	.	Parent=FBgn0261268.3.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130505504	130507660	.	+	0	Parent=FBgn0261268.3.mrna1
Chr2	gffcl	locus	130523536	130524667	.	-	.	ID=RLOC_00021648;geneIDs=comp156623_c0_seq1.path1;transcripts=comp156623_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130523536	130524667	.	-	.	ID=comp156623_c0_seq1.mrna1;geneID=comp156623_c0_seq1.path1;Name=comp156623_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1129;mismatches=3;indels=4;unknowns=0;Target=comp156623_c0_seq1 1136 1 .;CDS_Target=comp156623_c0_seq1 1134 946 .;locus=RLOC_00021648
Chr2	stalkie_big_nohaplotig	exon	130523536	130524667	99	-	.	Parent=comp156623_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130523538	130523726	.	-	0	Parent=comp156623_c0_seq1.mrna1
Chr2	gffcl	locus	130526304	130572202	.	-	.	ID=RLOC_00021649;geneIDs=FBgn0002645.1.path1;transcripts=FBgn0002645.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130526304	130572202	.	-	.	ID=FBgn0002645.1.mrna1;geneID=FBgn0002645.1.path1;Name=FBgn0002645.1;Dir=sensecoverage=100.0;identity=99.9;matches=4252;mismatches=2;indels=1;unknowns=0;locus=RLOC_00021649
Chr2	stalkie_big_nohaplotig	exon	130526304	130528337	100	-	.	Parent=FBgn0002645.1.mrna1;Target=FBgn0002645.1 2221 4254 +
Chr2	stalkie_big_nohaplotig	exon	130569982	130572202	99	-	.	Parent=FBgn0002645.1.mrna1;Target=FBgn0002645.1 1 2220 +
Chr2	stalkie_big_nohaplotig	CDS	130526304	130528337	.	-	0	Parent=FBgn0002645.1.mrna1;Target=FBgn0002645.1 2221 4254 +
Chr2	stalkie_big_nohaplotig	CDS	130569982	130572156	.	-	0	Parent=FBgn0002645.1.mrna1;Target=FBgn0002645.1 46 2220 +
Chr2	gffcl	locus	130572964	130573179	.	+	.	ID=RLOC_00021650;geneIDs=comp69628_c0_seq1.path1;transcripts=comp69628_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130572964	130573179	.	+	.	ID=comp69628_c0_seq1.mrna1;geneID=comp69628_c0_seq1.path1;Name=comp69628_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=216;mismatches=0;indels=0;unknowns=0;Target=comp69628_c0_seq1 216 1 .;CDS_Target=comp69628_c0_seq1 155 81 .;locus=RLOC_00021650
Chr2	stalkie_big_nohaplotig	exon	130572964	130573179	100	+	.	Parent=comp69628_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130573044	130573118	.	+	0	Parent=comp69628_c0_seq1.mrna1
Chr2	gffcl	locus	130575178	130576499	.	+	.	ID=RLOC_00021651;geneIDs=FBgn0032620.1.path1;transcripts=FBgn0032620.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130575178	130576499	.	+	.	ID=FBgn0032620.1.mrna1;geneID=FBgn0032620.1.path1;Name=FBgn0032620.1;Dir=sensecoverage=100.0;identity=99.7;matches=1199;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021651
Chr2	stalkie_big_nohaplotig	exon	130575178	130575580	99	+	.	Parent=FBgn0032620.1.mrna1;Target=FBgn0032620.1 1 403 +
Chr2	stalkie_big_nohaplotig	exon	130575643	130575987	100	+	.	Parent=FBgn0032620.1.mrna1;Target=FBgn0032620.1 404 748 +
Chr2	stalkie_big_nohaplotig	exon	130576045	130576499	99	+	.	Parent=FBgn0032620.1.mrna1;Target=FBgn0032620.1 749 1203 +
Chr2	stalkie_big_nohaplotig	CDS	130575178	130575580	.	+	0	Parent=FBgn0032620.1.mrna1;Target=FBgn0032620.1 1 403 +
Chr2	stalkie_big_nohaplotig	CDS	130575643	130575987	.	+	2	Parent=FBgn0032620.1.mrna1;Target=FBgn0032620.1 404 748 +
Chr2	stalkie_big_nohaplotig	CDS	130576045	130576499	.	+	2	Parent=FBgn0032620.1.mrna1;Target=FBgn0032620.1 749 1203 +
Chr2	gffcl	locus	130578299	130579363	.	-	.	ID=RLOC_00021653;geneIDs=FBgn0037610.1.path1;transcripts=FBgn0037610.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130578299	130579363	.	-	.	ID=FBgn0037610.1.mrna1;geneID=FBgn0037610.1.path1;Name=FBgn0037610.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1062;mismatches=3;indels=0;unknowns=0;Target=FBgn0037610.1 1065 1 .;locus=RLOC_00021653
Chr2	stalkie_big_nohaplotig	exon	130578299	130579363	99	-	.	Parent=FBgn0037610.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130578299	130579363	.	-	0	Parent=FBgn0037610.1.mrna1
Chr2	gffcl	locus	130581465	130582757	.	-	.	ID=RLOC_00021654;geneIDs=FBgn0037298.1.path1;transcripts=FBgn0037298.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130581465	130582757	.	-	.	ID=FBgn0037298.1.mrna1;geneID=FBgn0037298.1.path1;Name=FBgn0037298.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1291;mismatches=2;indels=0;unknowns=0;Target=FBgn0037298.1 1293 1 .;locus=RLOC_00021654
Chr2	stalkie_big_nohaplotig	exon	130581465	130582757	99	-	.	Parent=FBgn0037298.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130581465	130582757	.	-	0	Parent=FBgn0037298.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130582864	130598245	.	-	.	ID=comp158941_c0_seq1.mrna1;geneID=comp158941_c0_seq1.path1;Name=comp158941_c0_seq1;Dir=indeterminatecoverage=71.6;identity=96.9;matches=894;mismatches=15;indels=14;unknowns=0;Target=comp158941_c0_seq1 221 117 .;locus=RLOC_00021655
Chr2	stalkie_big_nohaplotig	exon	130582864	130582870	100	-	.	Parent=comp158941_c0_seq1.mrna1;Target=comp158941_c0_seq1 1037 1031 .
Chr2	stalkie_big_nohaplotig	exon	130590769	130590777	77	-	.	Parent=comp158941_c0_seq1.mrna1;Target=comp158941_c0_seq1 1030 1022 .
Chr2	stalkie_big_nohaplotig	exon	130594131	130594140	90	-	.	Parent=comp158941_c0_seq1.mrna1;Target=comp158941_c0_seq1 1021 1012 .
Chr2	stalkie_big_nohaplotig	exon	130596025	130596029	100	-	.	Parent=comp158941_c0_seq1.mrna1;Target=comp158941_c0_seq1 1011 1007 .
Chr2	stalkie_big_nohaplotig	exon	130597368	130598245	97	-	.	Parent=comp158941_c0_seq1.mrna1;Target=comp158941_c0_seq1 1006 115 .
Chr2	stalkie_big_nohaplotig	CDS	130598139	130598243	.	-	0	Parent=comp158941_c0_seq1.mrna1
Chr2	gffcl	locus	130586440	130587726	.	-	.	ID=RLOC_00021656;geneIDs=FBgn0038038.4.path1;transcripts=FBgn0038038.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130586440	130587726	.	-	.	ID=FBgn0038038.4.mrna1;geneID=FBgn0038038.4.path1;Name=FBgn0038038.4;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1287;mismatches=0;indels=0;unknowns=0;Target=FBgn0038038.4 1287 1 .;locus=RLOC_00021656
Chr2	stalkie_big_nohaplotig	exon	130586440	130587726	100	-	.	Parent=FBgn0038038.4.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130586440	130587726	.	-	0	Parent=FBgn0038038.4.mrna1
Chr2	gffcl	locus	130589428	130590628	.	+	.	ID=RLOC_00021657;geneIDs=FBgn0026737.1.path1;transcripts=FBgn0026737.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130589428	130590628	.	+	.	ID=FBgn0026737.1.mrna1;geneID=FBgn0026737.1.path1;Name=FBgn0026737.1;Dir=sensecoverage=100.0;identity=99.2;matches=982;mismatches=8;indels=0;unknowns=0;locus=RLOC_00021657
Chr2	stalkie_big_nohaplotig	exon	130589428	130590041	98	+	.	Parent=FBgn0026737.1.mrna1;Target=FBgn0026737.1 1 614 +
Chr2	stalkie_big_nohaplotig	exon	130590096	130590259	100	+	.	Parent=FBgn0026737.1.mrna1;Target=FBgn0026737.1 615 778 +
Chr2	stalkie_big_nohaplotig	exon	130590417	130590628	100	+	.	Parent=FBgn0026737.1.mrna1;Target=FBgn0026737.1 779 990 +
Chr2	stalkie_big_nohaplotig	CDS	130589428	130590041	.	+	0	Parent=FBgn0026737.1.mrna1;Target=FBgn0026737.1 1 614 +
Chr2	stalkie_big_nohaplotig	CDS	130590096	130590259	.	+	1	Parent=FBgn0026737.1.mrna1;Target=FBgn0026737.1 615 778 +
Chr2	stalkie_big_nohaplotig	CDS	130590417	130590628	.	+	2	Parent=FBgn0026737.1.mrna1;Target=FBgn0026737.1 779 990 +
Chr2	gffcl	locus	130590833	130591874	.	-	.	ID=RLOC_00021658;geneIDs=FBgn0038327.1.path1;transcripts=FBgn0038327.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130590833	130591874	.	-	.	ID=FBgn0038327.1.mrna1;geneID=FBgn0038327.1.path1;Name=FBgn0038327.1;Dir=sensecoverage=100.0;identity=99.6;matches=917;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021658
Chr2	stalkie_big_nohaplotig	exon	130590833	130591013	100	-	.	Parent=FBgn0038327.1.mrna1;Target=FBgn0038327.1 741 921 +
Chr2	stalkie_big_nohaplotig	exon	130591078	130591243	98	-	.	Parent=FBgn0038327.1.mrna1;Target=FBgn0038327.1 575 740 +
Chr2	stalkie_big_nohaplotig	exon	130591301	130591874	99	-	.	Parent=FBgn0038327.1.mrna1;Target=FBgn0038327.1 1 574 +
Chr2	stalkie_big_nohaplotig	CDS	130590833	130591013	.	-	1	Parent=FBgn0038327.1.mrna1;Target=FBgn0038327.1 741 921 +
Chr2	stalkie_big_nohaplotig	CDS	130591078	130591243	.	-	2	Parent=FBgn0038327.1.mrna1;Target=FBgn0038327.1 575 740 +
Chr2	stalkie_big_nohaplotig	CDS	130591301	130591874	.	-	0	Parent=FBgn0038327.1.mrna1;Target=FBgn0038327.1 1 574 +
Chr2	gffcl	locus	130592817	130595193	.	+	.	ID=RLOC_00021659;geneIDs=FBgn0026634.1.path1;transcripts=FBgn0026634.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130592817	130595193	.	+	.	ID=FBgn0026634.1.mrna1;geneID=FBgn0026634.1.path1;Name=FBgn0026634.1;Dir=sensecoverage=100.0;identity=99.8;matches=2149;mismatches=5;indels=0;unknowns=0;locus=RLOC_00021659
Chr2	stalkie_big_nohaplotig	exon	130592817	130592927	100	+	.	Parent=FBgn0026634.1.mrna1;Target=FBgn0026634.1 1 111 +
Chr2	stalkie_big_nohaplotig	exon	130593024	130594082	99	+	.	Parent=FBgn0026634.1.mrna1;Target=FBgn0026634.1 112 1170 +
Chr2	stalkie_big_nohaplotig	exon	130594144	130594841	99	+	.	Parent=FBgn0026634.1.mrna1;Target=FBgn0026634.1 1171 1868 +
Chr2	stalkie_big_nohaplotig	exon	130594908	130595193	100	+	.	Parent=FBgn0026634.1.mrna1;Target=FBgn0026634.1 1869 2154 +
Chr2	stalkie_big_nohaplotig	CDS	130592817	130592927	.	+	0	Parent=FBgn0026634.1.mrna1;Target=FBgn0026634.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	130593024	130594082	.	+	0	Parent=FBgn0026634.1.mrna1;Target=FBgn0026634.1 112 1170 +
Chr2	stalkie_big_nohaplotig	CDS	130594144	130594841	.	+	0	Parent=FBgn0026634.1.mrna1;Target=FBgn0026634.1 1171 1868 +
Chr2	stalkie_big_nohaplotig	CDS	130594908	130595193	.	+	1	Parent=FBgn0026634.1.mrna1;Target=FBgn0026634.1 1869 2154 +
Chr2	gffcl	locus	130601375	130602573	.	-	.	ID=RLOC_00021661;geneIDs=FBgn0083967.1.path1;transcripts=FBgn0083967.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130601375	130602573	.	-	.	ID=FBgn0083967.1.mrna1;geneID=FBgn0083967.1.path1;Name=FBgn0083967.1;Dir=sensecoverage=100.0;identity=100.0;matches=495;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021661
Chr2	stalkie_big_nohaplotig	exon	130601375	130601542	100	-	.	Parent=FBgn0083967.1.mrna1;Target=FBgn0083967.1 328 495 +
Chr2	stalkie_big_nohaplotig	exon	130602186	130602457	100	-	.	Parent=FBgn0083967.1.mrna1;Target=FBgn0083967.1 56 327 +
Chr2	stalkie_big_nohaplotig	exon	130602519	130602573	100	-	.	Parent=FBgn0083967.1.mrna1;Target=FBgn0083967.1 1 55 +
Chr2	stalkie_big_nohaplotig	CDS	130601375	130601542	.	-	0	Parent=FBgn0083967.1.mrna1;Target=FBgn0083967.1 328 495 +
Chr2	stalkie_big_nohaplotig	CDS	130602186	130602457	.	-	2	Parent=FBgn0083967.1.mrna1;Target=FBgn0083967.1 56 327 +
Chr2	stalkie_big_nohaplotig	CDS	130602519	130602573	.	-	0	Parent=FBgn0083967.1.mrna1;Target=FBgn0083967.1 1 55 +
Chr2	gffcl	locus	130606665	130607912	.	+	.	ID=RLOC_00021662;geneIDs=FBgn0038948.1.path1;transcripts=FBgn0038948.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130606665	130607912	.	+	.	ID=FBgn0038948.1.mrna1;geneID=FBgn0038948.1.path1;Name=FBgn0038948.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1247;mismatches=1;indels=0;unknowns=0;Target=FBgn0038948.1 1248 1 .;locus=RLOC_00021662
Chr2	stalkie_big_nohaplotig	exon	130606665	130607912	99	+	.	Parent=FBgn0038948.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130606665	130607912	.	+	0	Parent=FBgn0038948.1.mrna1
Chr2	gffcl	locus	130611686	130620011	.	-	.	ID=RLOC_00021663;geneIDs=FBgn0038947.1.path1;transcripts=FBgn0038947.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130611686	130620011	.	-	.	ID=FBgn0038947.1.mrna1;geneID=FBgn0038947.1.path1;Name=FBgn0038947.1;Dir=sensecoverage=100.0;identity=100.0;matches=639;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021663
Chr2	stalkie_big_nohaplotig	exon	130611686	130611799	100	-	.	Parent=FBgn0038947.1.mrna1;Target=FBgn0038947.1 526 639 +
Chr2	stalkie_big_nohaplotig	exon	130611873	130612108	100	-	.	Parent=FBgn0038947.1.mrna1;Target=FBgn0038947.1 290 525 +
Chr2	stalkie_big_nohaplotig	exon	130617111	130617176	100	-	.	Parent=FBgn0038947.1.mrna1;Target=FBgn0038947.1 224 289 +
Chr2	stalkie_big_nohaplotig	exon	130617245	130617364	100	-	.	Parent=FBgn0038947.1.mrna1;Target=FBgn0038947.1 104 223 +
Chr2	stalkie_big_nohaplotig	exon	130619909	130620011	100	-	.	Parent=FBgn0038947.1.mrna1;Target=FBgn0038947.1 1 103 +
Chr2	stalkie_big_nohaplotig	CDS	130611686	130611799	.	-	0	Parent=FBgn0038947.1.mrna1;Target=FBgn0038947.1 526 639 +
Chr2	stalkie_big_nohaplotig	CDS	130611873	130612108	.	-	2	Parent=FBgn0038947.1.mrna1;Target=FBgn0038947.1 290 525 +
Chr2	stalkie_big_nohaplotig	CDS	130617111	130617176	.	-	2	Parent=FBgn0038947.1.mrna1;Target=FBgn0038947.1 224 289 +
Chr2	stalkie_big_nohaplotig	CDS	130617245	130617364	.	-	2	Parent=FBgn0038947.1.mrna1;Target=FBgn0038947.1 104 223 +
Chr2	stalkie_big_nohaplotig	CDS	130619909	130620011	.	-	0	Parent=FBgn0038947.1.mrna1;Target=FBgn0038947.1 1 103 +
Chr2	gffcl	locus	130624408	130634450	.	-	.	ID=RLOC_00021664;geneIDs=FBgn0038946.1.path1,comp150876_c0_seq1.path1;transcripts=FBgn0038946.1.mrna1,comp150876_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130624408	130634450	.	-	.	ID=FBgn0038946.1.mrna1;geneID=FBgn0038946.1.path1;Name=FBgn0038946.1;Dir=sensecoverage=100.0;identity=99.7;matches=769;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021664
Chr2	stalkie_big_nohaplotig	exon	130624408	130624449	100	-	.	Parent=FBgn0038946.1.mrna1;Target=FBgn0038946.1 730 771 +
Chr2	stalkie_big_nohaplotig	exon	130624535	130624669	100	-	.	Parent=FBgn0038946.1.mrna1;Target=FBgn0038946.1 595 729 +
Chr2	stalkie_big_nohaplotig	exon	130627476	130627611	100	-	.	Parent=FBgn0038946.1.mrna1;Target=FBgn0038946.1 459 594 +
Chr2	stalkie_big_nohaplotig	exon	130630704	130630830	99	-	.	Parent=FBgn0038946.1.mrna1;Target=FBgn0038946.1 332 458 +
Chr2	stalkie_big_nohaplotig	exon	130631630	130631795	99	-	.	Parent=FBgn0038946.1.mrna1;Target=FBgn0038946.1 166 331 +
Chr2	stalkie_big_nohaplotig	exon	130634286	130634450	100	-	.	Parent=FBgn0038946.1.mrna1;Target=FBgn0038946.1 1 165 +
Chr2	stalkie_big_nohaplotig	CDS	130624408	130624449	.	-	0	Parent=FBgn0038946.1.mrna1;Target=FBgn0038946.1 730 771 +
Chr2	stalkie_big_nohaplotig	CDS	130624535	130624669	.	-	0	Parent=FBgn0038946.1.mrna1;Target=FBgn0038946.1 595 729 +
Chr2	stalkie_big_nohaplotig	CDS	130627476	130627611	.	-	1	Parent=FBgn0038946.1.mrna1;Target=FBgn0038946.1 459 594 +
Chr2	stalkie_big_nohaplotig	CDS	130630704	130630830	.	-	2	Parent=FBgn0038946.1.mrna1;Target=FBgn0038946.1 332 458 +
Chr2	stalkie_big_nohaplotig	CDS	130631630	130631795	.	-	0	Parent=FBgn0038946.1.mrna1;Target=FBgn0038946.1 166 331 +
Chr2	stalkie_big_nohaplotig	CDS	130634286	130634450	.	-	0	Parent=FBgn0038946.1.mrna1;Target=FBgn0038946.1 1 165 +
Chr2	stalkie_big_nohaplotig	mRNA	130631132	130631653	.	-	.	ID=comp150876_c0_seq1.mrna1;geneID=comp150876_c0_seq1.path1;Name=comp150876_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=507;mismatches=14;indels=2;unknowns=0;Target=comp150876_c0_seq1 522 1 .;CDS_Target=comp150876_c0_seq1 302 216 .;locus=RLOC_00021664
Chr2	stalkie_big_nohaplotig	exon	130631132	130631653	96	-	.	Parent=comp150876_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130631351	130631437	.	-	0	Parent=comp150876_c0_seq1.mrna1
Chr2	gffcl	locus	130698501	130699081	.	+	.	ID=RLOC_00021666;geneIDs=comp147999_c0_seq1.path1;transcripts=comp147999_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130698501	130699081	.	+	.	ID=comp147999_c0_seq1.mrna1;geneID=comp147999_c0_seq1.path1;Name=comp147999_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=578;mismatches=3;indels=0;unknowns=0;Target=comp147999_c0_seq1 581 1 .;CDS_Target=comp147999_c0_seq1 580 386 .;locus=RLOC_00021666
Chr2	stalkie_big_nohaplotig	exon	130698501	130699081	99	+	.	Parent=comp147999_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130698886	130699080	.	+	0	Parent=comp147999_c0_seq1.mrna1
Chr2	gffcl	locus	130716543	130717069	.	-	.	ID=RLOC_00021667;geneIDs=comp162573_c0_seq1.path2;transcripts=comp162573_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	130716543	130717069	.	-	.	ID=comp162573_c0_seq1.mrna2;geneID=comp162573_c0_seq1.path2;Name=comp162573_c0_seq1;Dir=indeterminatecoverage=88.3;identity=88.5;matches=515;mismatches=12;indels=55;unknowns=0;Target=comp162573_c0_seq1 659 78 .;CDS_Target=comp162573_c0_seq1 421 311 .;locus=RLOC_00021667
Chr2	stalkie_big_nohaplotig	exon	130716543	130717069	88	-	.	Parent=comp162573_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	130716781	130716891	.	-	0	Parent=comp162573_c0_seq1.mrna2
Chr2	gffcl	locus	130721805	130722853	.	+	.	ID=RLOC_00021668;geneIDs=ORF1829.path1;transcripts=ORF1829.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130721805	130722853	.	+	.	ID=ORF1829.mrna1;geneID=ORF1829.path1;Name=ORF1829;Dir=sensecoverage=100.0;identity=98.3;matches=970;mismatches=17;indels=0;unknowns=0;locus=RLOC_00021668
Chr2	stalkie_big_nohaplotig	exon	130721805	130722649	98	+	.	Parent=ORF1829.mrna1;Target=ORF1829 1 845 +
Chr2	stalkie_big_nohaplotig	exon	130722712	130722853	98	+	.	Parent=ORF1829.mrna1;Target=ORF1829 846 987 +
Chr2	stalkie_big_nohaplotig	CDS	130721805	130722649	.	+	0	Parent=ORF1829.mrna1;Target=ORF1829 1 845 +
Chr2	stalkie_big_nohaplotig	CDS	130722712	130722853	.	+	1	Parent=ORF1829.mrna1;Target=ORF1829 846 987 +
Chr2	gffcl	locus	130741840	130742182	.	+	.	ID=RLOC_00021669;geneIDs=comp95688_c0_seq1.path1;transcripts=comp95688_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130741840	130742182	.	+	.	ID=comp95688_c0_seq1.mrna1;geneID=comp95688_c0_seq1.path1;Name=comp95688_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=343;mismatches=0;indels=0;unknowns=0;Target=comp95688_c0_seq1 343 1 .;CDS_Target=comp95688_c0_seq1 275 183 .;locus=RLOC_00021669
Chr2	stalkie_big_nohaplotig	exon	130741840	130742182	100	+	.	Parent=comp95688_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130742022	130742114	.	+	0	Parent=comp95688_c0_seq1.mrna1
Chr2	gffcl	locus	130743831	130745475	.	+	.	ID=RLOC_00021670;geneIDs=comp159373_c0_seq1.path1;transcripts=comp159373_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130743831	130745475	.	+	.	ID=comp159373_c0_seq1.mrna1;geneID=comp159373_c0_seq1.path1;Name=comp159373_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1642;mismatches=3;indels=4;unknowns=0;Target=comp159373_c0_seq1 1649 1 .;CDS_Target=comp159373_c0_seq1 554 396 .;locus=RLOC_00021670
Chr2	stalkie_big_nohaplotig	exon	130743831	130745475	99	+	.	Parent=comp159373_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130744226	130744384	.	+	0	Parent=comp159373_c0_seq1.mrna1
Chr2	gffcl	locus	130746521	130840379	.	-	.	ID=RLOC_00021671;geneIDs=FBgn0051163.1.path2,comp163409_c1_seq1.path1;transcripts=comp163409_c1_seq1.mrna1,FBgn0051163.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	130746521	130796176	.	-	.	ID=comp163409_c1_seq1.mrna1;geneID=comp163409_c1_seq1.path1;Name=comp163409_c1_seq1;Dir=antisensecoverage=61.2;identity=99.9;matches=3186;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021671
Chr2	stalkie_big_nohaplotig	exon	130746521	130747467	100	-	.	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 1 947 -
Chr2	stalkie_big_nohaplotig	exon	130747568	130747689	100	-	.	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 948 1069 -
Chr2	stalkie_big_nohaplotig	exon	130748640	130748887	100	-	.	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 1070 1317 -
Chr2	stalkie_big_nohaplotig	exon	130749318	130749460	100	-	.	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 1318 1460 -
Chr2	stalkie_big_nohaplotig	exon	130750412	130750604	100	-	.	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 1461 1653 -
Chr2	stalkie_big_nohaplotig	exon	130754507	130754710	100	-	.	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 1654 1857 -
Chr2	stalkie_big_nohaplotig	exon	130755418	130755499	100	-	.	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 1858 1939 -
Chr2	stalkie_big_nohaplotig	exon	130762988	130763151	100	-	.	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 1940 2103 -
Chr2	stalkie_big_nohaplotig	exon	130771214	130771371	100	-	.	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 2104 2261 -
Chr2	stalkie_big_nohaplotig	exon	130774098	130774152	100	-	.	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 2262 2316 -
Chr2	stalkie_big_nohaplotig	exon	130781379	130781435	100	-	.	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 2317 2373 -
Chr2	stalkie_big_nohaplotig	exon	130783712	130783789	98	-	.	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 2374 2451 -
Chr2	stalkie_big_nohaplotig	exon	130789718	130789824	100	-	.	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 2452 2558 -
Chr2	stalkie_big_nohaplotig	exon	130790456	130790505	100	-	.	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 2559 2608 -
Chr2	stalkie_big_nohaplotig	exon	130791115	130791413	99	-	.	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 2609 2907 -
Chr2	stalkie_big_nohaplotig	exon	130795895	130796176	100	-	.	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 2908 3189 -
Chr2	stalkie_big_nohaplotig	CDS	130747010	130747467	.	-	2	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 490 947 .
Chr2	stalkie_big_nohaplotig	CDS	130747568	130747689	.	-	1	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 948 1069 .
Chr2	stalkie_big_nohaplotig	CDS	130748640	130748887	.	-	0	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 1070 1317 .
Chr2	stalkie_big_nohaplotig	CDS	130749318	130749460	.	-	2	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 1318 1460 .
Chr2	stalkie_big_nohaplotig	CDS	130750412	130750604	.	-	0	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 1461 1653 .
Chr2	stalkie_big_nohaplotig	CDS	130754507	130754710	.	-	0	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 1654 1857 .
Chr2	stalkie_big_nohaplotig	CDS	130755418	130755499	.	-	1	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 1858 1939 .
Chr2	stalkie_big_nohaplotig	CDS	130762988	130763151	.	-	0	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 1940 2103 .
Chr2	stalkie_big_nohaplotig	CDS	130771214	130771371	.	-	2	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 2104 2261 .
Chr2	stalkie_big_nohaplotig	CDS	130774098	130774152	.	-	0	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 2262 2316 .
Chr2	stalkie_big_nohaplotig	CDS	130781379	130781435	.	-	0	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 2317 2373 .
Chr2	stalkie_big_nohaplotig	CDS	130783712	130783789	.	-	0	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 2374 2451 .
Chr2	stalkie_big_nohaplotig	CDS	130789718	130789824	.	-	2	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 2452 2558 .
Chr2	stalkie_big_nohaplotig	CDS	130790456	130790505	.	-	1	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 2559 2608 .
Chr2	stalkie_big_nohaplotig	CDS	130791115	130791413	.	-	0	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 2609 2907 .
Chr2	stalkie_big_nohaplotig	CDS	130795895	130796176	.	-	0	Parent=comp163409_c1_seq1.mrna1;Target=comp163409_c1_seq1 2908 3189 .
Chr2	stalkie_big_nohaplotig	mRNA	130747013	130840379	.	-	.	ID=FBgn0051163.1.mrna2;geneID=FBgn0051163.1.path2;Name=FBgn0051163.1;Dir=sensecoverage=85.1;identity=99.9;matches=2686;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021671
Chr2	stalkie_big_nohaplotig	exon	130747013	130747446	100	-	.	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 2726 3159 +
Chr2	stalkie_big_nohaplotig	exon	130747568	130747689	100	-	.	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 2604 2725 +
Chr2	stalkie_big_nohaplotig	exon	130748640	130748887	100	-	.	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 2356 2603 +
Chr2	stalkie_big_nohaplotig	exon	130749318	130749460	100	-	.	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 2213 2355 +
Chr2	stalkie_big_nohaplotig	exon	130750412	130750604	100	-	.	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 2020 2212 +
Chr2	stalkie_big_nohaplotig	exon	130754507	130754710	100	-	.	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 1816 2019 +
Chr2	stalkie_big_nohaplotig	exon	130755418	130755499	100	-	.	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 1734 1815 +
Chr2	stalkie_big_nohaplotig	exon	130762988	130763151	100	-	.	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 1570 1733 +
Chr2	stalkie_big_nohaplotig	exon	130771214	130771371	100	-	.	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 1412 1569 +
Chr2	stalkie_big_nohaplotig	exon	130774098	130774152	100	-	.	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 1357 1411 +
Chr2	stalkie_big_nohaplotig	exon	130781379	130781435	100	-	.	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 1300 1356 +
Chr2	stalkie_big_nohaplotig	exon	130783712	130783789	98	-	.	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 1222 1299 +
Chr2	stalkie_big_nohaplotig	exon	130789718	130789824	100	-	.	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 1115 1221 +
Chr2	stalkie_big_nohaplotig	exon	130790456	130790505	100	-	.	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 1065 1114 +
Chr2	stalkie_big_nohaplotig	exon	130791115	130791413	99	-	.	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 766 1064 +
Chr2	stalkie_big_nohaplotig	exon	130795895	130796177	100	-	.	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 483 765 +
Chr2	stalkie_big_nohaplotig	exon	130806240	130806244	100	-	.	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 478 482 +
Chr2	stalkie_big_nohaplotig	exon	130835920	130835924	100	-	.	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 473 477 +
Chr2	stalkie_big_nohaplotig	exon	130840378	130840379	100	-	.	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 471 472 +
Chr2	stalkie_big_nohaplotig	CDS	130747013	130747446	.	-	0	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 2726 3159 +
Chr2	stalkie_big_nohaplotig	CDS	130747568	130747689	.	-	2	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 2604 2725 +
Chr2	stalkie_big_nohaplotig	CDS	130748640	130748887	.	-	1	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 2356 2603 +
Chr2	stalkie_big_nohaplotig	CDS	130749318	130749460	.	-	0	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 2213 2355 +
Chr2	stalkie_big_nohaplotig	CDS	130750412	130750604	.	-	1	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 2020 2212 +
Chr2	stalkie_big_nohaplotig	CDS	130754507	130754710	.	-	1	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 1816 2019 +
Chr2	stalkie_big_nohaplotig	CDS	130755418	130755499	.	-	2	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 1734 1815 +
Chr2	stalkie_big_nohaplotig	CDS	130762988	130763151	.	-	1	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 1570 1733 +
Chr2	stalkie_big_nohaplotig	CDS	130771214	130771371	.	-	0	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 1412 1569 +
Chr2	stalkie_big_nohaplotig	CDS	130774098	130774152	.	-	1	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 1357 1411 +
Chr2	stalkie_big_nohaplotig	CDS	130781379	130781435	.	-	1	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 1300 1356 +
Chr2	stalkie_big_nohaplotig	CDS	130783712	130783789	.	-	1	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 1222 1299 +
Chr2	stalkie_big_nohaplotig	CDS	130789718	130789824	.	-	0	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 1115 1221 +
Chr2	stalkie_big_nohaplotig	CDS	130790456	130790505	.	-	2	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 1065 1114 +
Chr2	stalkie_big_nohaplotig	CDS	130791115	130791413	.	-	1	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 766 1064 +
Chr2	stalkie_big_nohaplotig	CDS	130795895	130796177	.	-	2	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 483 765 +
Chr2	stalkie_big_nohaplotig	CDS	130806240	130806244	.	-	1	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 478 482 +
Chr2	stalkie_big_nohaplotig	CDS	130835920	130835924	.	-	0	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 473 477 +
Chr2	stalkie_big_nohaplotig	CDS	130840378	130840379	.	-	2	Parent=FBgn0051163.1.mrna2;Target=FBgn0051163.1 471 472 +
Chr2	gffcl	locus	130848709	131138815	.	+	.	ID=RLOC_00021672;geneIDs=FBgn0263117.path1,FBgn0085382.1.path1,comp160819_c0_seq1.path1;transcripts=comp160819_c0_seq1.mrna1,FBgn0085382.1.mrna1,FBgn0263117.mrna1,FBgn0263117.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130848709	130995404	.	+	.	ID=comp160819_c0_seq1.mrna1;geneID=comp160819_c0_seq1.path1;Name=comp160819_c0_seq1;Dir=sensecoverage=30.8;identity=100.0;matches=723;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021672
Chr2	stalkie_big_nohaplotig	exon	130848709	130848714	100	+	.	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 563 568 +
Chr2	stalkie_big_nohaplotig	exon	130859910	130859913	100	+	.	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 569 572 +
Chr2	stalkie_big_nohaplotig	exon	130871996	130871997	100	+	.	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 573 574 +
Chr2	stalkie_big_nohaplotig	exon	130874074	130874077	100	+	.	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 575 578 +
Chr2	stalkie_big_nohaplotig	exon	130889921	130889925	100	+	.	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 579 583 +
Chr2	stalkie_big_nohaplotig	exon	130909073	130909074	100	+	.	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 584 585 +
Chr2	stalkie_big_nohaplotig	exon	130924330	130924334	100	+	.	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 586 590 +
Chr2	stalkie_big_nohaplotig	exon	130943323	130943324	100	+	.	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 591 592 +
Chr2	stalkie_big_nohaplotig	exon	130949671	130949672	100	+	.	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 593 594 +
Chr2	stalkie_big_nohaplotig	exon	130956674	130956790	100	+	.	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 595 711 +
Chr2	stalkie_big_nohaplotig	exon	130974379	130974579	100	+	.	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 712 912 +
Chr2	stalkie_big_nohaplotig	exon	130991677	130991817	100	+	.	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 913 1053 +
Chr2	stalkie_big_nohaplotig	exon	130992345	130992476	100	+	.	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 1054 1185 +
Chr2	stalkie_big_nohaplotig	exon	130995305	130995404	100	+	.	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 1186 1285 +
Chr2	stalkie_big_nohaplotig	CDS	130848710	130848714	.	+	0	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 564 568 +
Chr2	stalkie_big_nohaplotig	CDS	130859910	130859913	.	+	1	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 569 572 +
Chr2	stalkie_big_nohaplotig	CDS	130871996	130871997	.	+	0	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 573 574 +
Chr2	stalkie_big_nohaplotig	CDS	130874074	130874077	.	+	1	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 575 578 +
Chr2	stalkie_big_nohaplotig	CDS	130889921	130889925	.	+	0	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 579 583 +
Chr2	stalkie_big_nohaplotig	CDS	130909073	130909074	.	+	1	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 584 585 +
Chr2	stalkie_big_nohaplotig	CDS	130924330	130924334	.	+	2	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 586 590 +
Chr2	stalkie_big_nohaplotig	CDS	130943323	130943324	.	+	0	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 591 592 +
Chr2	stalkie_big_nohaplotig	CDS	130949671	130949672	.	+	1	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 593 594 +
Chr2	stalkie_big_nohaplotig	CDS	130956674	130956790	.	+	2	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 595 711 +
Chr2	stalkie_big_nohaplotig	CDS	130974379	130974579	.	+	2	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 712 912 +
Chr2	stalkie_big_nohaplotig	CDS	130991677	130991817	.	+	2	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 913 1053 +
Chr2	stalkie_big_nohaplotig	CDS	130992345	130992476	.	+	2	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 1054 1185 +
Chr2	stalkie_big_nohaplotig	CDS	130995305	130995402	.	+	2	Parent=comp160819_c0_seq1.mrna1;Target=comp160819_c0_seq1 1186 1283 +
Chr2	stalkie_big_nohaplotig	mRNA	130974379	131129117	.	+	.	ID=FBgn0085382.1.mrna1;geneID=FBgn0085382.1.path1;Name=FBgn0085382.1;Dir=sensecoverage=45.6;identity=100.0;matches=703;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021672
Chr2	stalkie_big_nohaplotig	exon	130974379	130974579	100	+	.	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 590 790 +
Chr2	stalkie_big_nohaplotig	exon	130991677	130991817	100	+	.	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 791 931 +
Chr2	stalkie_big_nohaplotig	exon	130992345	130992476	100	+	.	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 932 1063 +
Chr2	stalkie_big_nohaplotig	exon	130995305	130995401	100	+	.	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1064 1160 +
Chr2	stalkie_big_nohaplotig	exon	131019736	131019738	100	+	.	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1161 1163 +
Chr2	stalkie_big_nohaplotig	exon	131025541	131025550	100	+	.	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1164 1173 +
Chr2	stalkie_big_nohaplotig	exon	131036535	131036540	100	+	.	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1174 1179 +
Chr2	stalkie_big_nohaplotig	exon	131052012	131052013	100	+	.	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1180 1181 +
Chr2	stalkie_big_nohaplotig	exon	131056170	131056174	100	+	.	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1182 1186 +
Chr2	stalkie_big_nohaplotig	exon	131071078	131071084	100	+	.	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1187 1193 +
Chr2	stalkie_big_nohaplotig	exon	131077219	131077228	100	+	.	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1194 1203 +
Chr2	stalkie_big_nohaplotig	exon	131096239	131096246	100	+	.	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1206 1213 +
Chr2	stalkie_big_nohaplotig	exon	131096266	131096273	100	+	.	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1257 1264 +
Chr2	stalkie_big_nohaplotig	exon	131115412	131115421	100	+	.	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1265 1274 +
Chr2	stalkie_big_nohaplotig	exon	131116969	131116978	100	+	.	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1279 1288 +
Chr2	stalkie_big_nohaplotig	exon	131120593	131120599	100	+	.	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1318 1324 +
Chr2	stalkie_big_nohaplotig	exon	131128500	131128507	100	+	.	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1325 1332 +
Chr2	stalkie_big_nohaplotig	exon	131128703	131128715	100	+	.	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1338 1350 +
Chr2	stalkie_big_nohaplotig	exon	131129034	131129042	100	+	.	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1353 1361 +
Chr2	stalkie_big_nohaplotig	exon	131129097	131129104	100	+	.	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1408 1415 +
Chr2	stalkie_big_nohaplotig	exon	131129110	131129117	100	+	.	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1459 1466 +
Chr2	stalkie_big_nohaplotig	CDS	130974381	130974579	.	+	0	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 592 790 +
Chr2	stalkie_big_nohaplotig	CDS	130991677	130991817	.	+	2	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 791 931 +
Chr2	stalkie_big_nohaplotig	CDS	130992345	130992476	.	+	2	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 932 1063 +
Chr2	stalkie_big_nohaplotig	CDS	130995305	130995401	.	+	2	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1064 1160 +
Chr2	stalkie_big_nohaplotig	CDS	131019736	131019738	.	+	1	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1161 1163 +
Chr2	stalkie_big_nohaplotig	CDS	131025541	131025550	.	+	1	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1164 1173 +
Chr2	stalkie_big_nohaplotig	CDS	131036535	131036540	.	+	0	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1174 1179 +
Chr2	stalkie_big_nohaplotig	CDS	131052012	131052013	.	+	0	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1180 1181 +
Chr2	stalkie_big_nohaplotig	CDS	131056170	131056174	.	+	1	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1182 1186 +
Chr2	stalkie_big_nohaplotig	CDS	131071078	131071084	.	+	2	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1187 1193 +
Chr2	stalkie_big_nohaplotig	CDS	131077219	131077228	.	+	1	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1194 1203 +
Chr2	stalkie_big_nohaplotig	CDS	131096239	131096246	.	+	0	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1206 1213 +
Chr2	stalkie_big_nohaplotig	CDS	131096266	131096273	.	+	1	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1257 1264 +
Chr2	stalkie_big_nohaplotig	CDS	131115412	131115421	.	+	2	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1265 1274 +
Chr2	stalkie_big_nohaplotig	CDS	131116969	131116978	.	+	1	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1279 1288 +
Chr2	stalkie_big_nohaplotig	CDS	131120593	131120599	.	+	0	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1318 1324 +
Chr2	stalkie_big_nohaplotig	CDS	131128500	131128507	.	+	2	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1325 1332 +
Chr2	stalkie_big_nohaplotig	CDS	131128703	131128715	.	+	0	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1338 1350 +
Chr2	stalkie_big_nohaplotig	CDS	131129034	131129042	.	+	2	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1353 1361 +
Chr2	stalkie_big_nohaplotig	CDS	131129097	131129104	.	+	2	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1408 1415 +
Chr2	stalkie_big_nohaplotig	CDS	131129110	131129115	.	+	0	Parent=FBgn0085382.1.mrna1;Target=FBgn0085382.1 1459 1464 +
Chr2	stalkie_big_nohaplotig	mRNA	131122590	131131439	.	+	.	ID=FBgn0263117.mrna1;geneID=FBgn0263117.path1;Name=FBgn0263117;Dir=sensecoverage=99.7;identity=100.0;matches=571;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021672
Chr2	stalkie_big_nohaplotig	exon	131122590	131131439	.	+	.	Parent=FBgn0263117.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131122590	131138815	.	+	.	ID=FBgn0263117.mrna1;geneID=FBgn0263117.path1;Name=FBgn0263117;Dir=sensecoverage=100.0;identity=97.6;matches=616;mismatches=8;indels=7;unknowns=0;locus=RLOC_00021672
Chr2	stalkie_big_nohaplotig	exon	131122590	131122970	100	+	.	Parent=FBgn0263117.mrna1;Target=FBgn0263117 1 381 +
Chr2	stalkie_big_nohaplotig	exon	131131250	131131567	100	+	.	Parent=FBgn0263117.mrna1;Target=FBgn0263117 382 571 +
Chr2	stalkie_big_nohaplotig	exon	131131826	131132003	99	+	.	Parent=FBgn0263117.mrna1;Target=FBgn0263117 145 322 +
Chr2	stalkie_big_nohaplotig	exon	131132129	131132232	100	+	.	Parent=FBgn0263117.mrna1;Target=FBgn0263117 323 426 +
Chr2	stalkie_big_nohaplotig	exon	131138531	131138608	100	+	.	Parent=FBgn0263117.mrna1;Target=FBgn0263117 427 504 +
Chr2	stalkie_big_nohaplotig	exon	131138695	131138815	88	+	.	Parent=FBgn0263117.mrna1;Target=FBgn0263117 505 630 +
Chr2	stalkie_big_nohaplotig	CDS	131122590	131122970	100	+	0	Parent=FBgn0263117.mrna1;Target=FBgn0263117 1 381 +
Chr2	stalkie_big_nohaplotig	CDS	131131250	131131438	100	+	0	Parent=FBgn0263117.mrna1;Target=FBgn0263117 382 570 +
Chr2	stalkie_big_nohaplotig	CDS	131131424	131131567	100	+	0	Parent=FBgn0263117.mrna1;Target=FBgn0263117 1 144 +
Chr2	stalkie_big_nohaplotig	CDS	131131826	131132003	99	+	0	Parent=FBgn0263117.mrna1;Target=FBgn0263117 145 322 +
Chr2	stalkie_big_nohaplotig	CDS	131132129	131132232	100	+	1	Parent=FBgn0263117.mrna1;Target=FBgn0263117 323 426 +
Chr2	stalkie_big_nohaplotig	CDS	131138531	131138608	100	+	0	Parent=FBgn0263117.mrna1;Target=FBgn0263117 427 504 +
Chr2	stalkie_big_nohaplotig	CDS	131138695	131138815	88	+	0	Parent=FBgn0263117.mrna1;Target=FBgn0263117 505 630 +
Chr2	gffcl	locus	130904092	130904407	.	+	.	ID=RLOC_00021673;geneIDs=comp151363_c0_seq1.path1;transcripts=comp151363_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130904092	130904407	.	+	.	ID=comp151363_c0_seq1.mrna1;geneID=comp151363_c0_seq1.path1;Name=comp151363_c0_seq1;Dir=indeterminatecoverage=96.0;identity=97.2;matches=307;mismatches=9;indels=0;unknowns=0;Target=comp151363_c0_seq1 317 2 .;CDS_Target=comp151363_c0_seq1 213 112 .;locus=RLOC_00021673
Chr2	stalkie_big_nohaplotig	exon	130904092	130904407	97	+	.	Parent=comp151363_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	130904202	130904303	.	+	0	Parent=comp151363_c0_seq1.mrna1
Chr2	gffcl	locus	130945302	130945663	.	-	.	ID=RLOC_00021674;geneIDs=comp148472_c0_seq1.path1;transcripts=comp148472_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	130945302	130945663	.	-	.	ID=comp148472_c0_seq1.mrna1;geneID=comp148472_c0_seq1.path1;Name=comp148472_c0_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=305;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021674
Chr2	stalkie_big_nohaplotig	exon	130945302	130945499	100	-	.	Parent=comp148472_c0_seq1.mrna1;Target=comp148472_c0_seq1 109 306 +
Chr2	stalkie_big_nohaplotig	exon	130945556	130945663	99	-	.	Parent=comp148472_c0_seq1.mrna1;Target=comp148472_c0_seq1 1 108 +
Chr2	stalkie_big_nohaplotig	CDS	130945302	130945499	.	-	0	Parent=comp148472_c0_seq1.mrna1;Target=comp148472_c0_seq1 109 306 +
Chr2	stalkie_big_nohaplotig	CDS	130945556	130945567	.	-	0	Parent=comp148472_c0_seq1.mrna1;Target=comp148472_c0_seq1 97 108 +
Chr2	gffcl	locus	130948912	130949113	.	+	.	ID=RLOC_00021675;geneIDs=comp135582_c0_seq1.path2;transcripts=comp135582_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	130948912	130949113	.	+	.	ID=comp135582_c0_seq1.mrna2;geneID=comp135582_c0_seq1.path2;Name=comp135582_c0_seq1;Dir=indeterminatecoverage=96.7;identity=99.0;matches=200;mismatches=2;indels=0;unknowns=0;Target=comp135582_c0_seq1 209 8 .;CDS_Target=comp135582_c0_seq1 208 8 .;locus=RLOC_00021675
Chr2	stalkie_big_nohaplotig	exon	130948912	130949113	99	+	.	Parent=comp135582_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	130948912	130949112	.	+	0	Parent=comp135582_c0_seq1.mrna2
Chr2	gffcl	locus	130949430	130950289	.	-	.	ID=RLOC_00021676;geneIDs=comp154528_c2_seq1.path2;transcripts=comp154528_c2_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	130949430	130950289	.	-	.	ID=comp154528_c2_seq1.mrna2;geneID=comp154528_c2_seq1.path2;Name=comp154528_c2_seq1;Dir=antisensecoverage=99.2;identity=93.3;matches=750;mismatches=42;indels=12;unknowns=0;locus=RLOC_00021676
Chr2	stalkie_big_nohaplotig	exon	130949430	130949899	88	-	.	Parent=comp154528_c2_seq1.mrna2;Target=comp154528_c2_seq1 7 464 -
Chr2	stalkie_big_nohaplotig	exon	130949956	130950289	99	-	.	Parent=comp154528_c2_seq1.mrna2;Target=comp154528_c2_seq1 465 798 -
Chr2	stalkie_big_nohaplotig	CDS	130949432	130949899	.	-	0	Parent=comp154528_c2_seq1.mrna2;Target=comp154528_c2_seq1 9 464 .
Chr2	stalkie_big_nohaplotig	CDS	130949956	130949958	.	-	0	Parent=comp154528_c2_seq1.mrna2;Target=comp154528_c2_seq1 465 467 .
Chr2	gffcl	locus	131049557	131050234	.	-	.	ID=RLOC_00021677;geneIDs=comp157132_c0_seq1.path1;transcripts=comp157132_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131049557	131050234	.	-	.	ID=comp157132_c0_seq1.mrna1;geneID=comp157132_c0_seq1.path1;Name=comp157132_c0_seq1;Dir=indeterminatecoverage=81.5;identity=99.6;matches=675;mismatches=3;indels=0;unknowns=0;Target=comp157132_c0_seq1 818 141 .;CDS_Target=comp157132_c0_seq1 707 561 .;locus=RLOC_00021677
Chr2	stalkie_big_nohaplotig	exon	131049557	131050234	99	-	.	Parent=comp157132_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	131049668	131049814	.	-	0	Parent=comp157132_c0_seq1.mrna1
Chr2	gffcl	locus	131058950	131060266	.	+	.	ID=RLOC_00021678;geneIDs=ORF1494.path1;transcripts=ORF1494.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131058950	131060266	.	+	.	ID=ORF1494.mrna1;geneID=ORF1494.path1;Name=ORF1494;Dir=sensecoverage=100.0;identity=99.8;matches=1081;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021678
Chr2	stalkie_big_nohaplotig	exon	131058950	131058985	100	+	.	Parent=ORF1494.mrna1;Target=ORF1494 1 36 +
Chr2	stalkie_big_nohaplotig	exon	131059119	131060019	99	+	.	Parent=ORF1494.mrna1;Target=ORF1494 37 937 +
Chr2	stalkie_big_nohaplotig	exon	131060121	131060266	100	+	.	Parent=ORF1494.mrna1;Target=ORF1494 938 1083 +
Chr2	stalkie_big_nohaplotig	CDS	131058950	131058985	.	+	0	Parent=ORF1494.mrna1;Target=ORF1494 1 36 +
Chr2	stalkie_big_nohaplotig	CDS	131059119	131060019	.	+	0	Parent=ORF1494.mrna1;Target=ORF1494 37 937 +
Chr2	stalkie_big_nohaplotig	CDS	131060121	131060266	.	+	2	Parent=ORF1494.mrna1;Target=ORF1494 938 1083 +
Chr2	gffcl	locus	131063903	131065023	.	+	.	ID=RLOC_00021679;geneIDs=ORF1973.path2;transcripts=ORF1973.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	131063903	131065023	.	+	.	ID=ORF1973.mrna2;geneID=ORF1973.path2;Name=ORF1973;Dir=sensecoverage=100.0;identity=99.8;matches=946;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021679
Chr2	stalkie_big_nohaplotig	exon	131063903	131063947	100	+	.	Parent=ORF1973.mrna2;Target=ORF1973 1 45 +
Chr2	stalkie_big_nohaplotig	exon	131064052	131064853	99	+	.	Parent=ORF1973.mrna2;Target=ORF1973 46 847 +
Chr2	stalkie_big_nohaplotig	exon	131064923	131065023	100	+	.	Parent=ORF1973.mrna2;Target=ORF1973 848 948 +
Chr2	stalkie_big_nohaplotig	CDS	131063903	131063947	.	+	0	Parent=ORF1973.mrna2;Target=ORF1973 1 45 +
Chr2	stalkie_big_nohaplotig	CDS	131064052	131064853	.	+	0	Parent=ORF1973.mrna2;Target=ORF1973 46 847 +
Chr2	stalkie_big_nohaplotig	CDS	131064923	131065023	.	+	2	Parent=ORF1973.mrna2;Target=ORF1973 848 948 +
Chr2	gffcl	locus	131065443	131073452	.	+	.	ID=RLOC_00021680;geneIDs=FBgn0038938.1.path1;transcripts=FBgn0038938.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131065443	131073452	.	+	.	ID=FBgn0038938.1.mrna1;geneID=FBgn0038938.1.path1;Name=FBgn0038938.1;Dir=sensecoverage=100.0;identity=100.0;matches=1791;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021680
Chr2	stalkie_big_nohaplotig	exon	131065443	131065765	100	+	.	Parent=FBgn0038938.1.mrna1;Target=FBgn0038938.1 1 323 +
Chr2	stalkie_big_nohaplotig	exon	131065835	131065950	100	+	.	Parent=FBgn0038938.1.mrna1;Target=FBgn0038938.1 324 439 +
Chr2	stalkie_big_nohaplotig	exon	131067224	131067386	100	+	.	Parent=FBgn0038938.1.mrna1;Target=FBgn0038938.1 440 602 +
Chr2	stalkie_big_nohaplotig	exon	131067552	131067728	100	+	.	Parent=FBgn0038938.1.mrna1;Target=FBgn0038938.1 603 779 +
Chr2	stalkie_big_nohaplotig	exon	131070377	131070526	100	+	.	Parent=FBgn0038938.1.mrna1;Target=FBgn0038938.1 780 929 +
Chr2	stalkie_big_nohaplotig	exon	131071189	131071413	100	+	.	Parent=FBgn0038938.1.mrna1;Target=FBgn0038938.1 930 1154 +
Chr2	stalkie_big_nohaplotig	exon	131072391	131072518	100	+	.	Parent=FBgn0038938.1.mrna1;Target=FBgn0038938.1 1155 1282 +
Chr2	stalkie_big_nohaplotig	exon	131072634	131072720	100	+	.	Parent=FBgn0038938.1.mrna1;Target=FBgn0038938.1 1283 1369 +
Chr2	stalkie_big_nohaplotig	exon	131072786	131073120	100	+	.	Parent=FBgn0038938.1.mrna1;Target=FBgn0038938.1 1370 1704 +
Chr2	stalkie_big_nohaplotig	exon	131073366	131073452	100	+	.	Parent=FBgn0038938.1.mrna1;Target=FBgn0038938.1 1705 1791 +
Chr2	stalkie_big_nohaplotig	CDS	131065443	131065765	.	+	0	Parent=FBgn0038938.1.mrna1;Target=FBgn0038938.1 1 323 +
Chr2	stalkie_big_nohaplotig	CDS	131065835	131065950	.	+	1	Parent=FBgn0038938.1.mrna1;Target=FBgn0038938.1 324 439 +
Chr2	stalkie_big_nohaplotig	CDS	131067224	131067386	.	+	2	Parent=FBgn0038938.1.mrna1;Target=FBgn0038938.1 440 602 +
Chr2	stalkie_big_nohaplotig	CDS	131067552	131067728	.	+	1	Parent=FBgn0038938.1.mrna1;Target=FBgn0038938.1 603 779 +
Chr2	stalkie_big_nohaplotig	CDS	131070377	131070526	.	+	1	Parent=FBgn0038938.1.mrna1;Target=FBgn0038938.1 780 929 +
Chr2	stalkie_big_nohaplotig	CDS	131071189	131071413	.	+	1	Parent=FBgn0038938.1.mrna1;Target=FBgn0038938.1 930 1154 +
Chr2	stalkie_big_nohaplotig	CDS	131072391	131072518	.	+	1	Parent=FBgn0038938.1.mrna1;Target=FBgn0038938.1 1155 1282 +
Chr2	stalkie_big_nohaplotig	CDS	131072634	131072720	.	+	2	Parent=FBgn0038938.1.mrna1;Target=FBgn0038938.1 1283 1369 +
Chr2	stalkie_big_nohaplotig	CDS	131072786	131073120	.	+	2	Parent=FBgn0038938.1.mrna1;Target=FBgn0038938.1 1370 1704 +
Chr2	stalkie_big_nohaplotig	CDS	131073366	131073452	.	+	0	Parent=FBgn0038938.1.mrna1;Target=FBgn0038938.1 1705 1791 +
Chr2	gffcl	locus	131092099	131093504	.	+	.	ID=RLOC_00021681;geneIDs=comp159474_c0_seq1.path1;transcripts=comp159474_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131092099	131093504	.	+	.	ID=comp159474_c0_seq1.mrna1;geneID=comp159474_c0_seq1.path1;Name=comp159474_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1390;mismatches=16;indels=3;unknowns=0;Target=comp159474_c0_seq1 1409 1 .;CDS_Target=comp159474_c0_seq1 833 678 .;locus=RLOC_00021681
Chr2	stalkie_big_nohaplotig	exon	131092099	131093504	98	+	.	Parent=comp159474_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	131092773	131092928	.	+	0	Parent=comp159474_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131288338	133237889	.	+	.	ID=comp143234_c1_seq1.mrna1;geneID=comp143234_c1_seq1.path1;Name=comp143234_c1_seq1;Dir=antisensecoverage=85.8;identity=99.9;matches=816;mismatches=1;indels=0;unknowns=0;Target=comp143234_c1_seq1 324 503 .;locus=RLOC_00021682
Chr2	stalkie_big_nohaplotig	exon	131288338	131288346	100	+	.	Parent=comp143234_c1_seq1.mrna1;Target=comp143234_c1_seq1 847 855 -
Chr2	stalkie_big_nohaplotig	exon	131299572	131299575	100	+	.	Parent=comp143234_c1_seq1.mrna1;Target=comp143234_c1_seq1 843 846 -
Chr2	stalkie_big_nohaplotig	exon	131299584	131299591	100	+	.	Parent=comp143234_c1_seq1.mrna1;Target=comp143234_c1_seq1 797 804 -
Chr2	stalkie_big_nohaplotig	exon	131307521	131307525	100	+	.	Parent=comp143234_c1_seq1.mrna1;Target=comp143234_c1_seq1 792 796 -
Chr2	stalkie_big_nohaplotig	exon	131313032	131313035	100	+	.	Parent=comp143234_c1_seq1.mrna1;Target=comp143234_c1_seq1 788 791 -
Chr2	stalkie_big_nohaplotig	exon	131318943	131318953	90	+	.	Parent=comp143234_c1_seq1.mrna1;Target=comp143234_c1_seq1 777 787 -
Chr2	stalkie_big_nohaplotig	exon	131320173	131320182	100	+	.	Parent=comp143234_c1_seq1.mrna1;Target=comp143234_c1_seq1 767 776 -
Chr2	stalkie_big_nohaplotig	exon	133237035	133237052	100	+	.	Parent=comp143234_c1_seq1.mrna1;Target=comp143234_c1_seq1 749 766 -
Chr2	stalkie_big_nohaplotig	exon	133237142	133237889	100	+	.	Parent=comp143234_c1_seq1.mrna1;Target=comp143234_c1_seq1 1 748 -
Chr2	stalkie_big_nohaplotig	CDS	133237387	133237566	.	+	0	Parent=comp143234_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131316357	131318026	.	+	.	ID=comp161585_c1_seq1.mrna1;geneID=comp161585_c1_seq1.path1;Name=comp161585_c1_seq1;Dir=indeterminatecoverage=85.3;identity=94.2;matches=1600;mismatches=55;indels=44;unknowns=0;Target=comp161585_c1_seq1 618 526 .;locus=RLOC_00021682
Chr2	stalkie_big_nohaplotig	exon	131316357	131317303	97	+	.	Parent=comp161585_c1_seq1.mrna1;Target=comp161585_c1_seq1 948 1 .
Chr2	stalkie_big_nohaplotig	exon	131317314	131318026	89	+	.	Parent=comp161585_c1_seq1.mrna1;Target=comp161585_c1_seq1 1694 949 .
Chr2	stalkie_big_nohaplotig	CDS	131316881	131316973	.	+	0	Parent=comp161585_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131319288	131319622	.	-	.	ID=comp1112935_c0_seq1.mrna1;geneID=comp1112935_c0_seq1.path1;Name=comp1112935_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=327;mismatches=6;indels=2;unknowns=0;Target=comp1112935_c0_seq1 333 1 .;CDS_Target=comp1112935_c0_seq1 137 3 .;locus=RLOC_00021682
Chr2	stalkie_big_nohaplotig	exon	131319288	131319622	97	-	.	Parent=comp1112935_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	131319486	131319620	.	-	0	Parent=comp1112935_c0_seq1.mrna1
Chr2	gffcl	locus	131375940	131379282	.	+	.	ID=RLOC_00021684;geneIDs=comp148529_c0_seq1.path1;transcripts=comp148529_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131375940	131379282	.	+	.	ID=comp148529_c0_seq1.mrna1;geneID=comp148529_c0_seq1.path1;Name=comp148529_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=1608;mismatches=5;indels=0;unknowns=0;Target=comp148529_c0_seq1 16 177 .;locus=RLOC_00021684
Chr2	stalkie_big_nohaplotig	exon	131375940	131376800	99	+	.	Parent=comp148529_c0_seq1.mrna1;Target=comp148529_c0_seq1 753 1613 -
Chr2	stalkie_big_nohaplotig	exon	131378473	131378560	100	+	.	Parent=comp148529_c0_seq1.mrna1;Target=comp148529_c0_seq1 665 752 -
Chr2	stalkie_big_nohaplotig	exon	131378619	131379282	99	+	.	Parent=comp148529_c0_seq1.mrna1;Target=comp148529_c0_seq1 1 664 -
Chr2	stalkie_big_nohaplotig	CDS	131379106	131379267	.	+	0	Parent=comp148529_c0_seq1.mrna1
Chr2	gffcl	locus	131422671	131423477	.	+	.	ID=RLOC_00021685;geneIDs=comp144136_c0_seq1.path1;transcripts=comp144136_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131422671	131423477	.	+	.	ID=comp144136_c0_seq1.mrna1;geneID=comp144136_c0_seq1.path1;Name=comp144136_c0_seq1;Dir=indeterminatecoverage=57.1;identity=82.6;matches=478;mismatches=37;indels=64;unknowns=0;Target=comp144136_c0_seq1 82 80 .;locus=RLOC_00021685
Chr2	stalkie_big_nohaplotig	exon	131422671	131422817	90	+	.	Parent=comp144136_c0_seq1.mrna1;Target=comp144136_c0_seq1 144 2 .
Chr2	stalkie_big_nohaplotig	exon	131422868	131423262	79	+	.	Parent=comp144136_c0_seq1.mrna1;Target=comp144136_c0_seq1 529 145 .
Chr2	stalkie_big_nohaplotig	exon	131423466	131423477	100	+	.	Parent=comp144136_c0_seq1.mrna1;Target=comp144136_c0_seq1 541 530 .
Chr2	stalkie_big_nohaplotig	CDS	131422754	131422756	.	+	0	Parent=comp144136_c0_seq1.mrna1
Chr2	gffcl	locus	131489272	131489720	.	-	.	ID=RLOC_00021686;geneIDs=comp147242_c0_seq1.path1;transcripts=comp147242_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131489272	131489720	.	-	.	ID=comp147242_c0_seq1.mrna1;geneID=comp147242_c0_seq1.path1;Name=comp147242_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=444;mismatches=5;indels=0;unknowns=0;Target=comp147242_c0_seq1 449 1 .;CDS_Target=comp147242_c0_seq1 89 3 .;locus=RLOC_00021686
Chr2	stalkie_big_nohaplotig	exon	131489272	131489720	98	-	.	Parent=comp147242_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	131489632	131489718	.	-	0	Parent=comp147242_c0_seq1.mrna1
Chr2	gffcl	locus	131503365	131506236	.	+	.	ID=RLOC_00021687;geneIDs=FBgn0036546.1.path1;transcripts=FBgn0036546.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131503365	131506236	.	+	.	ID=FBgn0036546.1.mrna1;geneID=FBgn0036546.1.path1;Name=FBgn0036546.1;Dir=sensecoverage=100.0;identity=99.9;matches=986;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021687
Chr2	stalkie_big_nohaplotig	exon	131503365	131503386	100	+	.	Parent=FBgn0036546.1.mrna1;Target=FBgn0036546.1 1 22 +
Chr2	stalkie_big_nohaplotig	exon	131504898	131505007	100	+	.	Parent=FBgn0036546.1.mrna1;Target=FBgn0036546.1 23 132 +
Chr2	stalkie_big_nohaplotig	exon	131505084	131505226	100	+	.	Parent=FBgn0036546.1.mrna1;Target=FBgn0036546.1 133 275 +
Chr2	stalkie_big_nohaplotig	exon	131505348	131505792	100	+	.	Parent=FBgn0036546.1.mrna1;Target=FBgn0036546.1 276 720 +
Chr2	stalkie_big_nohaplotig	exon	131505900	131506065	99	+	.	Parent=FBgn0036546.1.mrna1;Target=FBgn0036546.1 721 886 +
Chr2	stalkie_big_nohaplotig	exon	131506136	131506236	100	+	.	Parent=FBgn0036546.1.mrna1;Target=FBgn0036546.1 887 987 +
Chr2	stalkie_big_nohaplotig	CDS	131503365	131503386	.	+	0	Parent=FBgn0036546.1.mrna1;Target=FBgn0036546.1 1 22 +
Chr2	stalkie_big_nohaplotig	CDS	131504898	131505007	.	+	2	Parent=FBgn0036546.1.mrna1;Target=FBgn0036546.1 23 132 +
Chr2	stalkie_big_nohaplotig	CDS	131505084	131505226	.	+	0	Parent=FBgn0036546.1.mrna1;Target=FBgn0036546.1 133 275 +
Chr2	stalkie_big_nohaplotig	CDS	131505348	131505792	.	+	1	Parent=FBgn0036546.1.mrna1;Target=FBgn0036546.1 276 720 +
Chr2	stalkie_big_nohaplotig	CDS	131505900	131506065	.	+	0	Parent=FBgn0036546.1.mrna1;Target=FBgn0036546.1 721 886 +
Chr2	stalkie_big_nohaplotig	CDS	131506136	131506236	.	+	2	Parent=FBgn0036546.1.mrna1;Target=FBgn0036546.1 887 987 +
Chr2	gffcl	locus	131508679	131508923	.	+	.	ID=RLOC_00021688;geneIDs=comp135005_c0_seq1.path1;transcripts=comp135005_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131508679	131508923	.	+	.	ID=comp135005_c0_seq1.mrna1;geneID=comp135005_c0_seq1.path1;Name=comp135005_c0_seq1;Dir=indeterminatecoverage=98.4;identity=100.0;matches=245;mismatches=0;indels=0;unknowns=0;Target=comp135005_c0_seq1 245 1 .;CDS_Target=comp135005_c0_seq1 186 124 .;locus=RLOC_00021688
Chr2	stalkie_big_nohaplotig	exon	131508679	131508923	100	+	.	Parent=comp135005_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	131508802	131508864	.	+	0	Parent=comp135005_c0_seq1.mrna1
Chr2	gffcl	locus	131510512	131510633	.	-	.	ID=RLOC_00021689;geneIDs=comp145658_c0_seq1.path1;transcripts=comp145658_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131510512	131510633	.	-	.	ID=comp145658_c0_seq1.mrna1;geneID=comp145658_c0_seq1.path1;Name=comp145658_c0_seq1;Dir=indeterminatecoverage=36.1;identity=96.7;matches=118;mismatches=4;indels=0;unknowns=0;Target=comp145658_c0_seq1 122 1 .;locus=RLOC_00021689
Chr2	stalkie_big_nohaplotig	exon	131510512	131510633	96	-	.	Parent=comp145658_c0_seq1.mrna1
Chr2	gffcl	locus	131510927	131756766	.	-	.	ID=RLOC_00021690;geneIDs=FBgn0264491.1.path1,comp148958_c2_seq1.path1,comp149922_c0_seq1.path1;transcripts=comp149922_c0_seq1.mrna1,comp148958_c2_seq1.mrna1,FBgn0264491.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131510927	131517606	.	-	.	ID=comp149922_c0_seq1.mrna1;geneID=comp149922_c0_seq1.path1;Name=comp149922_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=1167;mismatches=2;indels=0;unknowns=0;Target=comp149922_c0_seq1 688 795 +;locus=RLOC_00021690
Chr2	stalkie_big_nohaplotig	exon	131510927	131511578	100	-	.	Parent=comp149922_c0_seq1.mrna1;Target=comp149922_c0_seq1 518 1169 +
Chr2	stalkie_big_nohaplotig	exon	131517090	131517606	99	-	.	Parent=comp149922_c0_seq1.mrna1;Target=comp149922_c0_seq1 1 517 +
Chr2	stalkie_big_nohaplotig	CDS	131511301	131511408	.	-	0	Parent=comp149922_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131517584	131756766	.	-	.	ID=comp148958_c2_seq1.mrna1;geneID=comp148958_c2_seq1.path1;Name=comp148958_c2_seq1;Dir=antisensecoverage=67.3;identity=100.0;matches=1210;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021690
Chr2	stalkie_big_nohaplotig	exon	131517584	131517800	100	-	.	Parent=comp148958_c2_seq1.mrna1;Target=comp148958_c2_seq1 589 805 -
Chr2	stalkie_big_nohaplotig	exon	131526032	131526337	100	-	.	Parent=comp148958_c2_seq1.mrna1;Target=comp148958_c2_seq1 806 1111 -
Chr2	stalkie_big_nohaplotig	exon	131528112	131528211	100	-	.	Parent=comp148958_c2_seq1.mrna1;Target=comp148958_c2_seq1 1112 1211 -
Chr2	stalkie_big_nohaplotig	exon	131528639	131528779	100	-	.	Parent=comp148958_c2_seq1.mrna1;Target=comp148958_c2_seq1 1212 1352 -
Chr2	stalkie_big_nohaplotig	exon	131536256	131536372	100	-	.	Parent=comp148958_c2_seq1.mrna1;Target=comp148958_c2_seq1 1353 1469 -
Chr2	stalkie_big_nohaplotig	exon	131560610	131560743	100	-	.	Parent=comp148958_c2_seq1.mrna1;Target=comp148958_c2_seq1 1470 1603 -
Chr2	stalkie_big_nohaplotig	exon	131756572	131756766	100	-	.	Parent=comp148958_c2_seq1.mrna1;Target=comp148958_c2_seq1 1604 1798 -
Chr2	stalkie_big_nohaplotig	CDS	131517697	131517800	.	-	2	Parent=comp148958_c2_seq1.mrna1;Target=comp148958_c2_seq1 702 805 .
Chr2	stalkie_big_nohaplotig	CDS	131526032	131526337	.	-	2	Parent=comp148958_c2_seq1.mrna1;Target=comp148958_c2_seq1 806 1111 .
Chr2	stalkie_big_nohaplotig	CDS	131528112	131528211	.	-	0	Parent=comp148958_c2_seq1.mrna1;Target=comp148958_c2_seq1 1112 1211 .
Chr2	stalkie_big_nohaplotig	CDS	131528639	131528779	.	-	0	Parent=comp148958_c2_seq1.mrna1;Target=comp148958_c2_seq1 1212 1352 .
Chr2	stalkie_big_nohaplotig	CDS	131536256	131536372	.	-	0	Parent=comp148958_c2_seq1.mrna1;Target=comp148958_c2_seq1 1353 1469 .
Chr2	stalkie_big_nohaplotig	CDS	131560610	131560743	.	-	2	Parent=comp148958_c2_seq1.mrna1;Target=comp148958_c2_seq1 1470 1603 .
Chr2	stalkie_big_nohaplotig	CDS	131756572	131756731	.	-	0	Parent=comp148958_c2_seq1.mrna1;Target=comp148958_c2_seq1 1604 1763 .
Chr2	stalkie_big_nohaplotig	mRNA	131517700	131725737	.	-	.	ID=FBgn0264491.1.mrna1;geneID=FBgn0264491.1.path1;Name=FBgn0264491.1;Dir=sensecoverage=100.0;identity=100.0;matches=1086;mismatches=0;indels=0;unknowns=3;locus=RLOC_00021690
Chr2	stalkie_big_nohaplotig	exon	131517700	131517800	100	-	.	Parent=FBgn0264491.1.mrna1;Target=FBgn0264491.1 989 1089 +
Chr2	stalkie_big_nohaplotig	exon	131526032	131526337	100	-	.	Parent=FBgn0264491.1.mrna1;Target=FBgn0264491.1 683 988 +
Chr2	stalkie_big_nohaplotig	exon	131528112	131528211	100	-	.	Parent=FBgn0264491.1.mrna1;Target=FBgn0264491.1 583 682 +
Chr2	stalkie_big_nohaplotig	exon	131528639	131528779	100	-	.	Parent=FBgn0264491.1.mrna1;Target=FBgn0264491.1 442 582 +
Chr2	stalkie_big_nohaplotig	exon	131536256	131536372	100	-	.	Parent=FBgn0264491.1.mrna1;Target=FBgn0264491.1 325 441 +
Chr2	stalkie_big_nohaplotig	exon	131560610	131560743	100	-	.	Parent=FBgn0264491.1.mrna1;Target=FBgn0264491.1 191 324 +
Chr2	stalkie_big_nohaplotig	exon	131725548	131725737	100	-	.	Parent=FBgn0264491.1.mrna1;Target=FBgn0264491.1 1 190 +
Chr2	stalkie_big_nohaplotig	CDS	131517700	131517800	.	-	2	Parent=FBgn0264491.1.mrna1;Target=FBgn0264491.1 989 1089 +
Chr2	stalkie_big_nohaplotig	CDS	131526032	131526337	.	-	2	Parent=FBgn0264491.1.mrna1;Target=FBgn0264491.1 683 988 +
Chr2	stalkie_big_nohaplotig	CDS	131528112	131528211	.	-	0	Parent=FBgn0264491.1.mrna1;Target=FBgn0264491.1 583 682 +
Chr2	stalkie_big_nohaplotig	CDS	131528639	131528779	.	-	0	Parent=FBgn0264491.1.mrna1;Target=FBgn0264491.1 442 582 +
Chr2	stalkie_big_nohaplotig	CDS	131536256	131536372	.	-	0	Parent=FBgn0264491.1.mrna1;Target=FBgn0264491.1 325 441 +
Chr2	stalkie_big_nohaplotig	CDS	131560610	131560743	.	-	2	Parent=FBgn0264491.1.mrna1;Target=FBgn0264491.1 191 324 +
Chr2	stalkie_big_nohaplotig	CDS	131725548	131725737	.	-	0	Parent=FBgn0264491.1.mrna1;Target=FBgn0264491.1 1 190 +
Chr2	gffcl	locus	131605800	131607374	.	+	.	ID=RLOC_00021691;geneIDs=ORF641.path1;transcripts=ORF641.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131605800	131607374	.	+	.	ID=ORF641.mrna1;geneID=ORF641.path1;Name=ORF641;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1575;mismatches=0;indels=0;unknowns=0;Target=ORF641 1575 1 .;locus=RLOC_00021691
Chr2	stalkie_big_nohaplotig	exon	131605800	131607374	100	+	.	Parent=ORF641.mrna1
Chr2	stalkie_big_nohaplotig	CDS	131605800	131607374	.	+	0	Parent=ORF641.mrna1
Chr2	gffcl	locus	131636220	131643517	.	-	.	ID=RLOC_00021692;geneIDs=FBgn0038929.1.path1;transcripts=FBgn0038929.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131636220	131643517	.	-	.	ID=FBgn0038929.1.mrna1;geneID=FBgn0038929.1.path1;Name=FBgn0038929.1;Dir=sensecoverage=100.0;identity=99.0;matches=784;mismatches=8;indels=0;unknowns=0;locus=RLOC_00021692
Chr2	stalkie_big_nohaplotig	exon	131636220	131636472	99	-	.	Parent=FBgn0038929.1.mrna1;Target=FBgn0038929.1 540 792 +
Chr2	stalkie_big_nohaplotig	exon	131636673	131636811	98	-	.	Parent=FBgn0038929.1.mrna1;Target=FBgn0038929.1 401 539 +
Chr2	stalkie_big_nohaplotig	exon	131638585	131638727	97	-	.	Parent=FBgn0038929.1.mrna1;Target=FBgn0038929.1 258 400 +
Chr2	stalkie_big_nohaplotig	exon	131643261	131643517	99	-	.	Parent=FBgn0038929.1.mrna1;Target=FBgn0038929.1 1 257 +
Chr2	stalkie_big_nohaplotig	CDS	131636220	131636472	.	-	1	Parent=FBgn0038929.1.mrna1;Target=FBgn0038929.1 540 792 +
Chr2	stalkie_big_nohaplotig	CDS	131636673	131636811	.	-	2	Parent=FBgn0038929.1.mrna1;Target=FBgn0038929.1 401 539 +
Chr2	stalkie_big_nohaplotig	CDS	131638585	131638727	.	-	1	Parent=FBgn0038929.1.mrna1;Target=FBgn0038929.1 258 400 +
Chr2	stalkie_big_nohaplotig	CDS	131643261	131643517	.	-	0	Parent=FBgn0038929.1.mrna1;Target=FBgn0038929.1 1 257 +
Chr2	gffcl	locus	131644955	131668625	.	-	.	ID=RLOC_00021693;geneIDs=comp140966_c1_seq1.path1;transcripts=comp140966_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131644955	131668625	.	-	.	ID=comp140966_c1_seq1.mrna1;geneID=comp140966_c1_seq1.path1;Name=comp140966_c1_seq1;Dir=indeterminatecoverage=44.2;identity=83.5;matches=213;mismatches=29;indels=13;unknowns=0;locus=RLOC_00021693
Chr2	stalkie_big_nohaplotig	exon	131644955	131645186	82	-	.	Parent=comp140966_c1_seq1.mrna1;Target=comp140966_c1_seq1 368 144 .
Chr2	stalkie_big_nohaplotig	exon	131658905	131658907	100	-	.	Parent=comp140966_c1_seq1.mrna1;Target=comp140966_c1_seq1 143 141 .
Chr2	stalkie_big_nohaplotig	exon	131659080	131659087	100	-	.	Parent=comp140966_c1_seq1.mrna1;Target=comp140966_c1_seq1 140 133 .
Chr2	stalkie_big_nohaplotig	exon	131668617	131668625	100	-	.	Parent=comp140966_c1_seq1.mrna1;Target=comp140966_c1_seq1 132 124 .
Chr2	stalkie_big_nohaplotig	CDS	131645131	131645186	.	-	1	Parent=comp140966_c1_seq1.mrna1;Target=comp140966_c1_seq1 192 144 .
Chr2	stalkie_big_nohaplotig	CDS	131658905	131658907	.	-	1	Parent=comp140966_c1_seq1.mrna1;Target=comp140966_c1_seq1 143 141 .
Chr2	stalkie_big_nohaplotig	CDS	131659080	131659087	.	-	0	Parent=comp140966_c1_seq1.mrna1;Target=comp140966_c1_seq1 140 133 .
Chr2	stalkie_big_nohaplotig	CDS	131668617	131668625	.	-	0	Parent=comp140966_c1_seq1.mrna1;Target=comp140966_c1_seq1 132 124 .
Chr2	gffcl	locus	131660919	131662734	.	-	.	ID=RLOC_00021694;geneIDs=FBgn0036008.3.path1;transcripts=FBgn0036008.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131660919	131662734	.	-	.	ID=FBgn0036008.3.mrna1;geneID=FBgn0036008.3.path1;Name=FBgn0036008.3;Dir=sensecoverage=100.0;identity=99.2;matches=643;mismatches=5;indels=0;unknowns=0;locus=RLOC_00021694
Chr2	stalkie_big_nohaplotig	exon	131660919	131661046	100	-	.	Parent=FBgn0036008.3.mrna1;Target=FBgn0036008.3 521 648 +
Chr2	stalkie_big_nohaplotig	exon	131662215	131662734	99	-	.	Parent=FBgn0036008.3.mrna1;Target=FBgn0036008.3 1 520 +
Chr2	stalkie_big_nohaplotig	CDS	131660919	131661046	.	-	2	Parent=FBgn0036008.3.mrna1;Target=FBgn0036008.3 521 648 +
Chr2	stalkie_big_nohaplotig	CDS	131662215	131662734	.	-	0	Parent=FBgn0036008.3.mrna1;Target=FBgn0036008.3 1 520 +
Chr2	gffcl	locus	131710331	131711081	.	+	.	ID=RLOC_00021695;geneIDs=comp153813_c0_seq1.path1;transcripts=comp153813_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131710331	131711081	.	+	.	ID=comp153813_c0_seq1.mrna1;geneID=comp153813_c0_seq1.path1;Name=comp153813_c0_seq1;Dir=indeterminatecoverage=96.3;identity=99.9;matches=750;mismatches=1;indels=0;unknowns=0;Target=comp153813_c0_seq1 779 29 .;CDS_Target=comp153813_c0_seq1 145 29 .;locus=RLOC_00021695
Chr2	stalkie_big_nohaplotig	exon	131710331	131711081	99	+	.	Parent=comp153813_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	131710331	131710447	.	+	0	Parent=comp153813_c0_seq1.mrna1
Chr2	gffcl	locus	131781011	131781966	.	+	.	ID=RLOC_00021696;geneIDs=comp154741_c0_seq1.path1;transcripts=comp154741_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131781011	131781966	.	+	.	ID=comp154741_c0_seq1.mrna1;geneID=comp154741_c0_seq1.path1;Name=comp154741_c0_seq1;Dir=sensecoverage=99.2;identity=99.4;matches=871;mismatches=5;indels=0;unknowns=0;Target=comp154741_c0_seq1 191 571 +;locus=RLOC_00021696
Chr2	stalkie_big_nohaplotig	exon	131781011	131781618	99	+	.	Parent=comp154741_c0_seq1.mrna1;Target=comp154741_c0_seq1 8 615 +
Chr2	stalkie_big_nohaplotig	exon	131781699	131781966	100	+	.	Parent=comp154741_c0_seq1.mrna1;Target=comp154741_c0_seq1 616 883 +
Chr2	stalkie_big_nohaplotig	CDS	131781194	131781574	.	+	0	Parent=comp154741_c0_seq1.mrna1
Chr2	gffcl	locus	131786250	131790498	.	-	.	ID=RLOC_00021697;geneIDs=FBgn0025140.1.path1;transcripts=FBgn0025140.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131786250	131790498	.	-	.	ID=FBgn0025140.1.mrna1;geneID=FBgn0025140.1.path1;Name=FBgn0025140.1;Dir=sensecoverage=100.0;identity=100.0;matches=1962;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021697
Chr2	stalkie_big_nohaplotig	exon	131786250	131786576	100	-	.	Parent=FBgn0025140.1.mrna1;Target=FBgn0025140.1 1636 1962 +
Chr2	stalkie_big_nohaplotig	exon	131787826	131787996	100	-	.	Parent=FBgn0025140.1.mrna1;Target=FBgn0025140.1 1465 1635 +
Chr2	stalkie_big_nohaplotig	exon	131788064	131788216	100	-	.	Parent=FBgn0025140.1.mrna1;Target=FBgn0025140.1 1312 1464 +
Chr2	stalkie_big_nohaplotig	exon	131788844	131789145	100	-	.	Parent=FBgn0025140.1.mrna1;Target=FBgn0025140.1 1010 1311 +
Chr2	stalkie_big_nohaplotig	exon	131789223	131789963	100	-	.	Parent=FBgn0025140.1.mrna1;Target=FBgn0025140.1 269 1009 +
Chr2	stalkie_big_nohaplotig	exon	131790157	131790276	100	-	.	Parent=FBgn0025140.1.mrna1;Target=FBgn0025140.1 149 268 +
Chr2	stalkie_big_nohaplotig	exon	131790351	131790498	100	-	.	Parent=FBgn0025140.1.mrna1;Target=FBgn0025140.1 1 148 +
Chr2	stalkie_big_nohaplotig	CDS	131786250	131786576	.	-	0	Parent=FBgn0025140.1.mrna1;Target=FBgn0025140.1 1636 1962 +
Chr2	stalkie_big_nohaplotig	CDS	131787826	131787996	.	-	0	Parent=FBgn0025140.1.mrna1;Target=FBgn0025140.1 1465 1635 +
Chr2	stalkie_big_nohaplotig	CDS	131788064	131788216	.	-	0	Parent=FBgn0025140.1.mrna1;Target=FBgn0025140.1 1312 1464 +
Chr2	stalkie_big_nohaplotig	CDS	131788844	131789145	.	-	2	Parent=FBgn0025140.1.mrna1;Target=FBgn0025140.1 1010 1311 +
Chr2	stalkie_big_nohaplotig	CDS	131789223	131789963	.	-	2	Parent=FBgn0025140.1.mrna1;Target=FBgn0025140.1 269 1009 +
Chr2	stalkie_big_nohaplotig	CDS	131790157	131790276	.	-	2	Parent=FBgn0025140.1.mrna1;Target=FBgn0025140.1 149 268 +
Chr2	stalkie_big_nohaplotig	CDS	131790351	131790498	.	-	0	Parent=FBgn0025140.1.mrna1;Target=FBgn0025140.1 1 148 +
Chr2	gffcl	locus	131802521	131803661	.	+	.	ID=RLOC_00021698;geneIDs=comp161576_c0_seq1.path1;transcripts=comp161576_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131802521	131803661	.	+	.	ID=comp161576_c0_seq1.mrna1;geneID=comp161576_c0_seq1.path1;Name=comp161576_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=1114;mismatches=27;indels=9;unknowns=0;Target=comp161576_c0_seq1 1150 1 .;CDS_Target=comp161576_c0_seq1 143 3 .;locus=RLOC_00021698
Chr2	stalkie_big_nohaplotig	exon	131802521	131803661	96	+	.	Parent=comp161576_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	131802523	131802663	.	+	0	Parent=comp161576_c0_seq1.mrna1
Chr2	gffcl	locus	131805157	131843464	.	-	.	ID=RLOC_00021699;geneIDs=FBgn0011739.1.path1;transcripts=FBgn0011739.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131805157	131843464	.	-	.	ID=FBgn0011739.1.mrna1;geneID=FBgn0011739.1.path1;Name=FBgn0011739.1;Dir=sensecoverage=100.0;identity=99.9;matches=3254;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021699
Chr2	stalkie_big_nohaplotig	exon	131805157	131805552	98	-	.	Parent=FBgn0011739.1.mrna1;Target=FBgn0011739.1 2863 3258 +
Chr2	stalkie_big_nohaplotig	exon	131805618	131805813	100	-	.	Parent=FBgn0011739.1.mrna1;Target=FBgn0011739.1 2667 2862 +
Chr2	stalkie_big_nohaplotig	exon	131806852	131806930	100	-	.	Parent=FBgn0011739.1.mrna1;Target=FBgn0011739.1 2588 2666 +
Chr2	stalkie_big_nohaplotig	exon	131806993	131807108	100	-	.	Parent=FBgn0011739.1.mrna1;Target=FBgn0011739.1 2472 2587 +
Chr2	stalkie_big_nohaplotig	exon	131819252	131819372	100	-	.	Parent=FBgn0011739.1.mrna1;Target=FBgn0011739.1 2351 2471 +
Chr2	stalkie_big_nohaplotig	exon	131819441	131821658	100	-	.	Parent=FBgn0011739.1.mrna1;Target=FBgn0011739.1 133 2350 +
Chr2	stalkie_big_nohaplotig	exon	131843333	131843464	100	-	.	Parent=FBgn0011739.1.mrna1;Target=FBgn0011739.1 1 132 +
Chr2	stalkie_big_nohaplotig	CDS	131805157	131805552	.	-	0	Parent=FBgn0011739.1.mrna1;Target=FBgn0011739.1 2863 3258 +
Chr2	stalkie_big_nohaplotig	CDS	131805618	131805813	.	-	1	Parent=FBgn0011739.1.mrna1;Target=FBgn0011739.1 2667 2862 +
Chr2	stalkie_big_nohaplotig	CDS	131806852	131806930	.	-	2	Parent=FBgn0011739.1.mrna1;Target=FBgn0011739.1 2588 2666 +
Chr2	stalkie_big_nohaplotig	CDS	131806993	131807108	.	-	1	Parent=FBgn0011739.1.mrna1;Target=FBgn0011739.1 2472 2587 +
Chr2	stalkie_big_nohaplotig	CDS	131819252	131819372	.	-	2	Parent=FBgn0011739.1.mrna1;Target=FBgn0011739.1 2351 2471 +
Chr2	stalkie_big_nohaplotig	CDS	131819441	131821658	.	-	0	Parent=FBgn0011739.1.mrna1;Target=FBgn0011739.1 133 2350 +
Chr2	stalkie_big_nohaplotig	CDS	131843333	131843464	.	-	0	Parent=FBgn0011739.1.mrna1;Target=FBgn0011739.1 1 132 +
Chr2	gffcl	locus	131843560	131869661	.	-	.	ID=RLOC_00021700;geneIDs=comp150269_c2_seq1.path1;transcripts=comp150269_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131843560	131869661	.	-	.	ID=comp150269_c2_seq1.mrna1;geneID=comp150269_c2_seq1.path1;Name=comp150269_c2_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=1087;mismatches=1;indels=0;unknowns=0;Target=comp150269_c2_seq1 911 1027 +;locus=RLOC_00021700
Chr2	stalkie_big_nohaplotig	exon	131843560	131843915	99	-	.	Parent=comp150269_c2_seq1.mrna1;Target=comp150269_c2_seq1 733 1088 +
Chr2	stalkie_big_nohaplotig	exon	131868930	131869661	100	-	.	Parent=comp150269_c2_seq1.mrna1;Target=comp150269_c2_seq1 1 732 +
Chr2	stalkie_big_nohaplotig	CDS	131843621	131843737	.	-	0	Parent=comp150269_c2_seq1.mrna1
Chr2	gffcl	locus	131872917	131873724	.	+	.	ID=RLOC_00021701;geneIDs=FBgn0037777.1.path1;transcripts=FBgn0037777.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131872917	131873724	.	+	.	ID=FBgn0037777.1.mrna1;geneID=FBgn0037777.1.path1;Name=FBgn0037777.1;Dir=sensecoverage=100.0;identity=99.0;matches=594;mismatches=6;indels=0;unknowns=0;locus=RLOC_00021701
Chr2	stalkie_big_nohaplotig	exon	131872917	131873079	100	+	.	Parent=FBgn0037777.1.mrna1;Target=FBgn0037777.1 1 163 +
Chr2	stalkie_big_nohaplotig	exon	131873164	131873255	98	+	.	Parent=FBgn0037777.1.mrna1;Target=FBgn0037777.1 164 255 +
Chr2	stalkie_big_nohaplotig	exon	131873321	131873546	99	+	.	Parent=FBgn0037777.1.mrna1;Target=FBgn0037777.1 256 481 +
Chr2	stalkie_big_nohaplotig	exon	131873606	131873724	97	+	.	Parent=FBgn0037777.1.mrna1;Target=FBgn0037777.1 482 600 +
Chr2	stalkie_big_nohaplotig	CDS	131872917	131873079	.	+	0	Parent=FBgn0037777.1.mrna1;Target=FBgn0037777.1 1 163 +
Chr2	stalkie_big_nohaplotig	CDS	131873164	131873255	.	+	2	Parent=FBgn0037777.1.mrna1;Target=FBgn0037777.1 164 255 +
Chr2	stalkie_big_nohaplotig	CDS	131873321	131873546	.	+	0	Parent=FBgn0037777.1.mrna1;Target=FBgn0037777.1 256 481 +
Chr2	stalkie_big_nohaplotig	CDS	131873606	131873724	.	+	2	Parent=FBgn0037777.1.mrna1;Target=FBgn0037777.1 482 600 +
Chr2	gffcl	locus	131873859	131875661	.	-	.	ID=RLOC_00021702;geneIDs=FBgn0027524.1.path1;transcripts=FBgn0027524.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131873859	131875661	.	-	.	ID=FBgn0027524.1.mrna1;geneID=FBgn0027524.1.path1;Name=FBgn0027524.1;Dir=sensecoverage=99.5;identity=98.9;matches=989;mismatches=11;indels=0;unknowns=0;locus=RLOC_00021702
Chr2	stalkie_big_nohaplotig	exon	131873859	131874129	98	-	.	Parent=FBgn0027524.1.mrna1;Target=FBgn0027524.1 735 1005 +
Chr2	stalkie_big_nohaplotig	exon	131874811	131874998	98	-	.	Parent=FBgn0027524.1.mrna1;Target=FBgn0027524.1 547 734 +
Chr2	stalkie_big_nohaplotig	exon	131875063	131875301	98	-	.	Parent=FBgn0027524.1.mrna1;Target=FBgn0027524.1 308 546 +
Chr2	stalkie_big_nohaplotig	exon	131875360	131875661	99	-	.	Parent=FBgn0027524.1.mrna1;Target=FBgn0027524.1 6 307 +
Chr2	stalkie_big_nohaplotig	CDS	131873859	131874129	.	-	1	Parent=FBgn0027524.1.mrna1;Target=FBgn0027524.1 735 1005 +
Chr2	stalkie_big_nohaplotig	CDS	131874811	131874998	.	-	0	Parent=FBgn0027524.1.mrna1;Target=FBgn0027524.1 547 734 +
Chr2	stalkie_big_nohaplotig	CDS	131875063	131875301	.	-	2	Parent=FBgn0027524.1.mrna1;Target=FBgn0027524.1 308 546 +
Chr2	stalkie_big_nohaplotig	CDS	131875360	131875660	.	-	0	Parent=FBgn0027524.1.mrna1;Target=FBgn0027524.1 7 307 +
Chr2	gffcl	locus	131912499	131960965	.	+	.	ID=RLOC_00021703;geneIDs=comp162984_c1_seq1.path1;transcripts=comp162984_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131912499	131960965	.	+	.	ID=comp162984_c1_seq1.mrna1;geneID=comp162984_c1_seq1.path1;Name=comp162984_c1_seq1;Dir=sensecoverage=99.8;identity=98.3;matches=3917;mismatches=46;indels=21;unknowns=0;locus=RLOC_00021703
Chr2	stalkie_big_nohaplotig	exon	131912499	131913453	94	+	.	Parent=comp162984_c1_seq1.mrna1;Target=comp162984_c1_seq1 9 979 +
Chr2	stalkie_big_nohaplotig	exon	131913516	131914026	98	+	.	Parent=comp162984_c1_seq1.mrna1;Target=comp162984_c1_seq1 980 1486 +
Chr2	stalkie_big_nohaplotig	exon	131936342	131936406	100	+	.	Parent=comp162984_c1_seq1.mrna1;Target=comp162984_c1_seq1 1487 1551 +
Chr2	stalkie_big_nohaplotig	exon	131958267	131959260	100	+	.	Parent=comp162984_c1_seq1.mrna1;Target=comp162984_c1_seq1 1552 2545 +
Chr2	stalkie_big_nohaplotig	exon	131959325	131959716	100	+	.	Parent=comp162984_c1_seq1.mrna1;Target=comp162984_c1_seq1 2546 2937 +
Chr2	stalkie_big_nohaplotig	exon	131959775	131960004	100	+	.	Parent=comp162984_c1_seq1.mrna1;Target=comp162984_c1_seq1 2938 3167 +
Chr2	stalkie_big_nohaplotig	exon	131960073	131960205	99	+	.	Parent=comp162984_c1_seq1.mrna1;Target=comp162984_c1_seq1 3168 3300 +
Chr2	stalkie_big_nohaplotig	exon	131960279	131960965	99	+	.	Parent=comp162984_c1_seq1.mrna1;Target=comp162984_c1_seq1 3301 3988 +
Chr2	stalkie_big_nohaplotig	CDS	131958268	131959260	.	+	0	Parent=comp162984_c1_seq1.mrna1;Target=comp162984_c1_seq1 1553 2545 +
Chr2	stalkie_big_nohaplotig	CDS	131959325	131959716	.	+	0	Parent=comp162984_c1_seq1.mrna1;Target=comp162984_c1_seq1 2546 2937 +
Chr2	stalkie_big_nohaplotig	CDS	131959775	131960004	.	+	1	Parent=comp162984_c1_seq1.mrna1;Target=comp162984_c1_seq1 2938 3167 +
Chr2	stalkie_big_nohaplotig	CDS	131960073	131960205	.	+	2	Parent=comp162984_c1_seq1.mrna1;Target=comp162984_c1_seq1 3168 3300 +
Chr2	stalkie_big_nohaplotig	CDS	131960279	131960846	.	+	1	Parent=comp162984_c1_seq1.mrna1;Target=comp162984_c1_seq1 3301 3868 +
Chr2	gffcl	locus	131975546	131976099	.	-	.	ID=RLOC_00021704;geneIDs=comp1104530_c0_seq1.path1;transcripts=comp1104530_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131975546	131976099	.	-	.	ID=comp1104530_c0_seq1.mrna1;geneID=comp1104530_c0_seq1.path1;Name=comp1104530_c0_seq1;Dir=indeterminatecoverage=99.6;identity=100.0;matches=554;mismatches=0;indels=0;unknowns=0;Target=comp1104530_c0_seq1 556 3 .;CDS_Target=comp1104530_c0_seq1 294 178 .;locus=RLOC_00021704
Chr2	stalkie_big_nohaplotig	exon	131975546	131976099	100	-	.	Parent=comp1104530_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	131975808	131975924	.	-	0	Parent=comp1104530_c0_seq1.mrna1
Chr2	gffcl	locus	131977162	131985479	.	+	.	ID=RLOC_00021705;geneIDs=FBgn0053208.path1;transcripts=FBgn0053208.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131977162	131985479	.	+	.	ID=FBgn0053208.mrna1;geneID=FBgn0053208.path1;Name=FBgn0053208;Dir=sensecoverage=100.0;identity=99.9;matches=4407;mismatches=6;indels=0;unknowns=0;locus=RLOC_00021705
Chr2	stalkie_big_nohaplotig	exon	131977162	131981211	99	+	.	Parent=FBgn0053208.mrna1;Target=FBgn0053208 1 4050 +
Chr2	stalkie_big_nohaplotig	exon	131985117	131985479	100	+	.	Parent=FBgn0053208.mrna1;Target=FBgn0053208 4051 4413 +
Chr2	stalkie_big_nohaplotig	CDS	131977162	131981211	.	+	0	Parent=FBgn0053208.mrna1;Target=FBgn0053208 1 4050 +
Chr2	stalkie_big_nohaplotig	CDS	131985117	131985479	.	+	0	Parent=FBgn0053208.mrna1;Target=FBgn0053208 4051 4413 +
Chr2	gffcl	locus	131998010	132096832	.	+	.	ID=RLOC_00021706;geneIDs=FBgn0003567.5.path1,comp163469_c1_seq1.path1;transcripts=FBgn0003567.5.mrna1,comp163469_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	131998010	132095386	.	+	.	ID=FBgn0003567.5.mrna1;geneID=FBgn0003567.5.path1;Name=FBgn0003567.5;Dir=sensecoverage=99.7;identity=99.2;matches=1704;mismatches=13;indels=1;unknowns=0;locus=RLOC_00021706
Chr2	stalkie_big_nohaplotig	exon	131998010	131998127	98	+	.	Parent=FBgn0003567.5.mrna1;Target=FBgn0003567.5 1 117 +
Chr2	stalkie_big_nohaplotig	exon	131999749	132000024	97	+	.	Parent=FBgn0003567.5.mrna1;Target=FBgn0003567.5 118 393 +
Chr2	stalkie_big_nohaplotig	exon	132076648	132077669	99	+	.	Parent=FBgn0003567.5.mrna1;Target=FBgn0003567.5 394 1415 +
Chr2	stalkie_big_nohaplotig	exon	132077719	132077851	99	+	.	Parent=FBgn0003567.5.mrna1;Target=FBgn0003567.5 1416 1548 +
Chr2	stalkie_big_nohaplotig	exon	132077911	132077957	100	+	.	Parent=FBgn0003567.5.mrna1;Target=FBgn0003567.5 1549 1595 +
Chr2	stalkie_big_nohaplotig	exon	132095134	132095170	91	+	.	Parent=FBgn0003567.5.mrna1;Target=FBgn0003567.5 1596 1632 +
Chr2	stalkie_big_nohaplotig	exon	132095302	132095386	100	+	.	Parent=FBgn0003567.5.mrna1;Target=FBgn0003567.5 1633 1717 +
Chr2	stalkie_big_nohaplotig	CDS	131998032	131998127	.	+	0	Parent=FBgn0003567.5.mrna1;Target=FBgn0003567.5 22 117 +
Chr2	stalkie_big_nohaplotig	CDS	131999749	132000024	.	+	0	Parent=FBgn0003567.5.mrna1;Target=FBgn0003567.5 118 393 +
Chr2	stalkie_big_nohaplotig	CDS	132076648	132077669	.	+	0	Parent=FBgn0003567.5.mrna1;Target=FBgn0003567.5 394 1415 +
Chr2	stalkie_big_nohaplotig	CDS	132077719	132077851	.	+	1	Parent=FBgn0003567.5.mrna1;Target=FBgn0003567.5 1416 1548 +
Chr2	stalkie_big_nohaplotig	CDS	132077911	132077957	.	+	0	Parent=FBgn0003567.5.mrna1;Target=FBgn0003567.5 1549 1595 +
Chr2	stalkie_big_nohaplotig	CDS	132095134	132095170	.	+	1	Parent=FBgn0003567.5.mrna1;Target=FBgn0003567.5 1596 1632 +
Chr2	stalkie_big_nohaplotig	CDS	132095302	132095385	.	+	0	Parent=FBgn0003567.5.mrna1;Target=FBgn0003567.5 1633 1716 +
Chr2	stalkie_big_nohaplotig	mRNA	132073959	132096832	.	+	.	ID=comp163469_c1_seq1.mrna1;geneID=comp163469_c1_seq1.path1;Name=comp163469_c1_seq1;Dir=sensecoverage=99.8;identity=99.3;matches=2984;mismatches=19;indels=2;unknowns=0;locus=RLOC_00021706
Chr2	stalkie_big_nohaplotig	exon	132073959	132074314	99	+	.	Parent=comp163469_c1_seq1.mrna1;Target=comp163469_c1_seq1 7 363 +
Chr2	stalkie_big_nohaplotig	exon	132074381	132074534	97	+	.	Parent=comp163469_c1_seq1.mrna1;Target=comp163469_c1_seq1 364 516 +
Chr2	stalkie_big_nohaplotig	exon	132076372	132077669	99	+	.	Parent=comp163469_c1_seq1.mrna1;Target=comp163469_c1_seq1 517 1814 +
Chr2	stalkie_big_nohaplotig	exon	132077719	132077851	99	+	.	Parent=comp163469_c1_seq1.mrna1;Target=comp163469_c1_seq1 1815 1947 +
Chr2	stalkie_big_nohaplotig	exon	132077911	132077957	100	+	.	Parent=comp163469_c1_seq1.mrna1;Target=comp163469_c1_seq1 1948 1994 +
Chr2	stalkie_big_nohaplotig	exon	132095134	132095170	91	+	.	Parent=comp163469_c1_seq1.mrna1;Target=comp163469_c1_seq1 1995 2031 +
Chr2	stalkie_big_nohaplotig	exon	132095302	132095386	100	+	.	Parent=comp163469_c1_seq1.mrna1;Target=comp163469_c1_seq1 2032 2116 +
Chr2	stalkie_big_nohaplotig	exon	132095448	132095527	100	+	.	Parent=comp163469_c1_seq1.mrna1;Target=comp163469_c1_seq1 2117 2196 +
Chr2	stalkie_big_nohaplotig	exon	132095966	132096309	100	+	.	Parent=comp163469_c1_seq1.mrna1;Target=comp163469_c1_seq1 2197 2540 +
Chr2	stalkie_big_nohaplotig	exon	132096363	132096832	99	+	.	Parent=comp163469_c1_seq1.mrna1;Target=comp163469_c1_seq1 2541 3010 +
Chr2	stalkie_big_nohaplotig	CDS	132074442	132074534	.	+	0	Parent=comp163469_c1_seq1.mrna1;Target=comp163469_c1_seq1 424 516 +
Chr2	stalkie_big_nohaplotig	CDS	132076372	132077669	.	+	0	Parent=comp163469_c1_seq1.mrna1;Target=comp163469_c1_seq1 517 1814 +
Chr2	stalkie_big_nohaplotig	CDS	132077719	132077851	.	+	1	Parent=comp163469_c1_seq1.mrna1;Target=comp163469_c1_seq1 1815 1947 +
Chr2	stalkie_big_nohaplotig	CDS	132077911	132077957	.	+	0	Parent=comp163469_c1_seq1.mrna1;Target=comp163469_c1_seq1 1948 1994 +
Chr2	stalkie_big_nohaplotig	CDS	132095134	132095170	.	+	1	Parent=comp163469_c1_seq1.mrna1;Target=comp163469_c1_seq1 1995 2031 +
Chr2	stalkie_big_nohaplotig	CDS	132095302	132095386	.	+	0	Parent=comp163469_c1_seq1.mrna1;Target=comp163469_c1_seq1 2032 2116 +
Chr2	stalkie_big_nohaplotig	CDS	132095448	132095455	.	+	2	Parent=comp163469_c1_seq1.mrna1;Target=comp163469_c1_seq1 2117 2124 +
Chr2	gffcl	locus	132009748	132023516	.	+	.	ID=RLOC_00021707;geneIDs=FBgn0038039.1.path1;transcripts=FBgn0038039.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132009748	132023516	.	+	.	ID=FBgn0038039.1.mrna1;geneID=FBgn0038039.1.path1;Name=FBgn0038039.1;Dir=sensecoverage=100.0;identity=99.9;matches=1316;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021707
Chr2	stalkie_big_nohaplotig	exon	132009748	132009823	100	+	.	Parent=FBgn0038039.1.mrna1;Target=FBgn0038039.1 1 76 +
Chr2	stalkie_big_nohaplotig	exon	132015197	132015381	100	+	.	Parent=FBgn0038039.1.mrna1;Target=FBgn0038039.1 77 261 +
Chr2	stalkie_big_nohaplotig	exon	132022242	132022323	98	+	.	Parent=FBgn0038039.1.mrna1;Target=FBgn0038039.1 262 343 +
Chr2	stalkie_big_nohaplotig	exon	132022386	132022684	100	+	.	Parent=FBgn0038039.1.mrna1;Target=FBgn0038039.1 344 642 +
Chr2	stalkie_big_nohaplotig	exon	132022746	132022964	100	+	.	Parent=FBgn0038039.1.mrna1;Target=FBgn0038039.1 643 861 +
Chr2	stalkie_big_nohaplotig	exon	132023061	132023516	100	+	.	Parent=FBgn0038039.1.mrna1;Target=FBgn0038039.1 862 1317 +
Chr2	stalkie_big_nohaplotig	CDS	132009748	132009823	.	+	0	Parent=FBgn0038039.1.mrna1;Target=FBgn0038039.1 1 76 +
Chr2	stalkie_big_nohaplotig	CDS	132015197	132015381	.	+	2	Parent=FBgn0038039.1.mrna1;Target=FBgn0038039.1 77 261 +
Chr2	stalkie_big_nohaplotig	CDS	132022242	132022323	.	+	0	Parent=FBgn0038039.1.mrna1;Target=FBgn0038039.1 262 343 +
Chr2	stalkie_big_nohaplotig	CDS	132022386	132022684	.	+	2	Parent=FBgn0038039.1.mrna1;Target=FBgn0038039.1 344 642 +
Chr2	stalkie_big_nohaplotig	CDS	132022746	132022964	.	+	0	Parent=FBgn0038039.1.mrna1;Target=FBgn0038039.1 643 861 +
Chr2	stalkie_big_nohaplotig	CDS	132023061	132023516	.	+	0	Parent=FBgn0038039.1.mrna1;Target=FBgn0038039.1 862 1317 +
Chr2	gffcl	locus	132025126	132025867	.	+	.	ID=RLOC_00021708;geneIDs=comp117470_c0_seq1.path1;transcripts=comp117470_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132025126	132025867	.	+	.	ID=comp117470_c0_seq1.mrna1;geneID=comp117470_c0_seq1.path1;Name=comp117470_c0_seq1;Dir=indeterminatecoverage=98.0;identity=99.6;matches=739;mismatches=1;indels=2;unknowns=0;Target=comp117470_c0_seq1 755 16 .;CDS_Target=comp117470_c0_seq1 250 161 .;locus=RLOC_00021708
Chr2	stalkie_big_nohaplotig	exon	132025126	132025867	99	+	.	Parent=comp117470_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	132025271	132025360	.	+	0	Parent=comp117470_c0_seq1.mrna1
Chr2	gffcl	locus	132025869	132038609	.	-	.	ID=RLOC_00021709;geneIDs=comp162960_c0_seq1.path1;transcripts=comp162960_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132025869	132038609	.	-	.	ID=comp162960_c0_seq1.mrna1;geneID=comp162960_c0_seq1.path1;Name=comp162960_c0_seq1;Dir=sensecoverage=99.9;identity=99.4;matches=4861;mismatches=27;indels=0;unknowns=0;locus=RLOC_00021709
Chr2	stalkie_big_nohaplotig	exon	132025869	132026041	99	-	.	Parent=comp162960_c0_seq1.mrna1;Target=comp162960_c0_seq1 4717 4889 +
Chr2	stalkie_big_nohaplotig	exon	132026114	132026349	100	-	.	Parent=comp162960_c0_seq1.mrna1;Target=comp162960_c0_seq1 4481 4716 +
Chr2	stalkie_big_nohaplotig	exon	132027669	132027769	99	-	.	Parent=comp162960_c0_seq1.mrna1;Target=comp162960_c0_seq1 4380 4480 +
Chr2	stalkie_big_nohaplotig	exon	132027839	132027925	100	-	.	Parent=comp162960_c0_seq1.mrna1;Target=comp162960_c0_seq1 4293 4379 +
Chr2	stalkie_big_nohaplotig	exon	132029637	132029844	100	-	.	Parent=comp162960_c0_seq1.mrna1;Target=comp162960_c0_seq1 4085 4292 +
Chr2	stalkie_big_nohaplotig	exon	132034157	132034189	100	-	.	Parent=comp162960_c0_seq1.mrna1;Target=comp162960_c0_seq1 4052 4084 +
Chr2	stalkie_big_nohaplotig	exon	132034560	132038609	99	-	.	Parent=comp162960_c0_seq1.mrna1;Target=comp162960_c0_seq1 2 4051 +
Chr2	stalkie_big_nohaplotig	CDS	132029758	132029844	.	-	0	Parent=comp162960_c0_seq1.mrna1;Target=comp162960_c0_seq1 4085 4171 +
Chr2	stalkie_big_nohaplotig	CDS	132034157	132034189	.	-	0	Parent=comp162960_c0_seq1.mrna1;Target=comp162960_c0_seq1 4052 4084 +
Chr2	stalkie_big_nohaplotig	CDS	132034560	132038609	.	-	0	Parent=comp162960_c0_seq1.mrna1;Target=comp162960_c0_seq1 2 4051 +
Chr2	gffcl	locus	132030397	132031629	.	-	.	ID=RLOC_00021710;geneIDs=comp149488_c0_seq1.path1;transcripts=comp149488_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132030397	132031629	.	-	.	ID=comp149488_c0_seq1.mrna1;geneID=comp149488_c0_seq1.path1;Name=comp149488_c0_seq1;Dir=indeterminatecoverage=98.6;identity=98.4;matches=1220;mismatches=9;indels=11;unknowns=0;Target=comp149488_c0_seq1 1236 1 .;CDS_Target=comp149488_c0_seq1 1158 991 .;locus=RLOC_00021710
Chr2	stalkie_big_nohaplotig	exon	132030397	132031629	98	-	.	Parent=comp149488_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	132030472	132030639	.	-	0	Parent=comp149488_c0_seq1.mrna1
Chr2	gffcl	locus	132047137	132047845	.	-	.	ID=RLOC_00021711;geneIDs=comp161825_c0_seq1.path1;transcripts=comp161825_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132047137	132047845	.	-	.	ID=comp161825_c0_seq1.mrna1;geneID=comp161825_c0_seq1.path1;Name=comp161825_c0_seq1;Dir=indeterminatecoverage=97.5;identity=98.7;matches=700;mismatches=9;indels=0;unknowns=0;Target=comp161825_c0_seq1 727 19 .;CDS_Target=comp161825_c0_seq1 727 644 .;locus=RLOC_00021711
Chr2	stalkie_big_nohaplotig	exon	132047137	132047845	98	-	.	Parent=comp161825_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	132047137	132047220	.	-	0	Parent=comp161825_c0_seq1.mrna1
Chr2	gffcl	locus	132050156	132052722	.	+	.	ID=RLOC_00021712;geneIDs=FBgn0038221.1.path1;transcripts=FBgn0038221.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132050156	132052722	.	+	.	ID=FBgn0038221.1.mrna1;geneID=FBgn0038221.1.path1;Name=FBgn0038221.1;Dir=sensecoverage=100.0;identity=98.7;matches=2040;mismatches=27;indels=0;unknowns=0;locus=RLOC_00021712
Chr2	stalkie_big_nohaplotig	exon	132050156	132050314	99	+	.	Parent=FBgn0038221.1.mrna1;Target=FBgn0038221.1 1 159 +
Chr2	stalkie_big_nohaplotig	exon	132050586	132050703	99	+	.	Parent=FBgn0038221.1.mrna1;Target=FBgn0038221.1 160 277 +
Chr2	stalkie_big_nohaplotig	exon	132050810	132052239	98	+	.	Parent=FBgn0038221.1.mrna1;Target=FBgn0038221.1 278 1707 +
Chr2	stalkie_big_nohaplotig	exon	132052298	132052512	99	+	.	Parent=FBgn0038221.1.mrna1;Target=FBgn0038221.1 1708 1922 +
Chr2	stalkie_big_nohaplotig	exon	132052578	132052722	98	+	.	Parent=FBgn0038221.1.mrna1;Target=FBgn0038221.1 1923 2067 +
Chr2	stalkie_big_nohaplotig	CDS	132050156	132050314	.	+	0	Parent=FBgn0038221.1.mrna1;Target=FBgn0038221.1 1 159 +
Chr2	stalkie_big_nohaplotig	CDS	132050586	132050703	.	+	0	Parent=FBgn0038221.1.mrna1;Target=FBgn0038221.1 160 277 +
Chr2	stalkie_big_nohaplotig	CDS	132050810	132052239	.	+	2	Parent=FBgn0038221.1.mrna1;Target=FBgn0038221.1 278 1707 +
Chr2	stalkie_big_nohaplotig	CDS	132052298	132052512	.	+	0	Parent=FBgn0038221.1.mrna1;Target=FBgn0038221.1 1708 1922 +
Chr2	stalkie_big_nohaplotig	CDS	132052578	132052722	.	+	1	Parent=FBgn0038221.1.mrna1;Target=FBgn0038221.1 1923 2067 +
Chr2	gffcl	locus	132053508	132053914	.	-	.	ID=RLOC_00021713;geneIDs=comp149553_c0_seq1.path6;transcripts=comp149553_c0_seq1.mrna6
Chr2	stalkie_big_nohaplotig	mRNA	132053508	132053914	.	-	.	ID=comp149553_c0_seq1.mrna6;geneID=comp149553_c0_seq1.path6;Name=comp149553_c0_seq1;Dir=indeterminatecoverage=90.4;identity=99.8;matches=406;mismatches=1;indels=0;unknowns=0;Target=comp149553_c0_seq1 407 1 .;CDS_Target=comp149553_c0_seq1 384 298 .;locus=RLOC_00021713
Chr2	stalkie_big_nohaplotig	exon	132053508	132053914	99	-	.	Parent=comp149553_c0_seq1.mrna6
Chr2	stalkie_big_nohaplotig	CDS	132053531	132053617	.	-	0	Parent=comp149553_c0_seq1.mrna6
Chr2	gffcl	locus	132070247	132106598	.	+	.	ID=RLOC_00021714;geneIDs=Hydra.path1,comp162193_c3_seq1.path1;transcripts=Hydra.mrna1,comp162193_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132102737	132106598	.	+	.	ID=comp162193_c3_seq1.mrna1;geneID=comp162193_c3_seq1.path1;Name=comp162193_c3_seq1;Dir=antisensecoverage=95.8;identity=99.6;matches=1569;mismatches=6;indels=1;unknowns=0;locus=RLOC_00021714
Chr2	stalkie_big_nohaplotig	exon	132102737	132102768	100	+	.	Parent=comp162193_c3_seq1.mrna1;Target=comp162193_c3_seq1 1545 1576 -
Chr2	stalkie_big_nohaplotig	exon	132102822	132103012	100	+	.	Parent=comp162193_c3_seq1.mrna1;Target=comp162193_c3_seq1 1354 1544 -
Chr2	stalkie_big_nohaplotig	exon	132103078	132103199	99	+	.	Parent=comp162193_c3_seq1.mrna1;Target=comp162193_c3_seq1 1232 1353 -
Chr2	stalkie_big_nohaplotig	exon	132105369	132106598	99	+	.	Parent=comp162193_c3_seq1.mrna1;Target=comp162193_c3_seq1 1 1231 -
Chr2	stalkie_big_nohaplotig	CDS	132102739	132102768	.	+	0	Parent=comp162193_c3_seq1.mrna1;Target=comp162193_c3_seq1 1545 1574 .
Chr2	stalkie_big_nohaplotig	CDS	132102822	132103012	.	+	0	Parent=comp162193_c3_seq1.mrna1;Target=comp162193_c3_seq1 1354 1544 .
Chr2	stalkie_big_nohaplotig	CDS	132103078	132103199	.	+	1	Parent=comp162193_c3_seq1.mrna1;Target=comp162193_c3_seq1 1232 1353 .
Chr2	stalkie_big_nohaplotig	CDS	132105369	132106174	.	+	2	Parent=comp162193_c3_seq1.mrna1;Target=comp162193_c3_seq1 426 1231 .
Chr2	gffcl	locus	132072045	132072790	.	-	.	ID=RLOC_00021715;geneIDs=comp157146_c0_seq1.path1;transcripts=comp157146_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132072045	132072790	.	-	.	ID=comp157146_c0_seq1.mrna1;geneID=comp157146_c0_seq1.path1;Name=comp157146_c0_seq1;Dir=indeterminatecoverage=98.7;identity=98.1;matches=732;mismatches=2;indels=12;unknowns=0;Target=comp157146_c0_seq1 734 1 .;CDS_Target=comp157146_c0_seq1 511 401 .;locus=RLOC_00021715
Chr2	stalkie_big_nohaplotig	exon	132072045	132072790	98	-	.	Parent=comp157146_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	132072268	132072378	.	-	0	Parent=comp157146_c0_seq1.mrna1
Chr2	gffcl	locus	132072915	132073290	.	+	.	ID=RLOC_00021716;geneIDs=comp138624_c0_seq1.path1;transcripts=comp138624_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132072915	132073290	.	+	.	ID=comp138624_c0_seq1.mrna1;geneID=comp138624_c0_seq1.path1;Name=comp138624_c0_seq1;Dir=indeterminatecoverage=99.4;identity=86.7;matches=326;mismatches=5;indels=45;unknowns=0;Target=comp138624_c0_seq1 331 1 .;CDS_Target=comp138624_c0_seq1 48 1 .;locus=RLOC_00021716
Chr2	stalkie_big_nohaplotig	exon	132072915	132073290	86	+	.	Parent=comp138624_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	132072915	132072962	.	+	0	Parent=comp138624_c0_seq1.mrna1
Chr2	gffcl	locus	132084004	132086089	.	+	.	ID=RLOC_00021717;geneIDs=comp160772_c0_seq1.path1;transcripts=comp160772_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132084004	132086089	.	+	.	ID=comp160772_c0_seq1.mrna1;geneID=comp160772_c0_seq1.path1;Name=comp160772_c0_seq1;Dir=sensecoverage=99.9;identity=98.1;matches=1766;mismatches=27;indels=7;unknowns=0;locus=RLOC_00021717
Chr2	stalkie_big_nohaplotig	exon	132084004	132084214	92	+	.	Parent=comp160772_c0_seq1.mrna1;Target=comp160772_c0_seq1 2 210 +
Chr2	stalkie_big_nohaplotig	exon	132084287	132085298	99	+	.	Parent=comp160772_c0_seq1.mrna1;Target=comp160772_c0_seq1 211 1222 +
Chr2	stalkie_big_nohaplotig	exon	132085373	132085486	98	+	.	Parent=comp160772_c0_seq1.mrna1;Target=comp160772_c0_seq1 1223 1336 +
Chr2	stalkie_big_nohaplotig	exon	132085561	132085895	97	+	.	Parent=comp160772_c0_seq1.mrna1;Target=comp160772_c0_seq1 1337 1674 +
Chr2	stalkie_big_nohaplotig	exon	132085966	132086089	97	+	.	Parent=comp160772_c0_seq1.mrna1;Target=comp160772_c0_seq1 1675 1798 +
Chr2	stalkie_big_nohaplotig	CDS	132085406	132085486	.	+	0	Parent=comp160772_c0_seq1.mrna1;Target=comp160772_c0_seq1 1256 1336 +
Chr2	stalkie_big_nohaplotig	CDS	132085561	132085895	.	+	0	Parent=comp160772_c0_seq1.mrna1;Target=comp160772_c0_seq1 1337 1674 +
Chr2	stalkie_big_nohaplotig	CDS	132085966	132086089	.	+	1	Parent=comp160772_c0_seq1.mrna1;Target=comp160772_c0_seq1 1675 1798 +
Chr2	gffcl	locus	132087923	132088577	.	-	.	ID=RLOC_00021718;geneIDs=comp156530_c0_seq1.path1;transcripts=comp156530_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132087923	132088577	.	-	.	ID=comp156530_c0_seq1.mrna1;geneID=comp156530_c0_seq1.path1;Name=comp156530_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=652;mismatches=3;indels=16;unknowns=0;Target=comp156530_c0_seq1 671 1 .;CDS_Target=comp156530_c0_seq1 229 149 .;locus=RLOC_00021718
Chr2	stalkie_big_nohaplotig	exon	132087923	132088577	97	-	.	Parent=comp156530_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	132088349	132088429	.	-	0	Parent=comp156530_c0_seq1.mrna1
Chr2	gffcl	locus	132117072	132117104	.	+	.	ID=RLOC_00021719;geneIDs=FBgn0003567.1.path2;transcripts=FBgn0003567.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	132117072	132117104	.	+	.	ID=FBgn0003567.1.mrna2;geneID=FBgn0003567.1.path2;Name=FBgn0003567.1;Dir=indeterminatecoverage=1.5;identity=100.0;matches=33;mismatches=0;indels=0;unknowns=0;Target=FBgn0003567.1 2169 2137 .;locus=RLOC_00021719
Chr2	stalkie_big_nohaplotig	exon	132117072	132117104	100	+	.	Parent=FBgn0003567.1.mrna2
Chr2	gffcl	locus	132134403	132173289	.	+	.	ID=RLOC_00021720;geneIDs=FBgn0020309.5.path1,comp163873_c0_seq1.path1;transcripts=comp163873_c0_seq1.mrna1,FBgn0020309.5.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132134403	132141950	.	+	.	ID=comp163873_c0_seq1.mrna1;geneID=comp163873_c0_seq1.path1;Name=comp163873_c0_seq1;Dir=antisensecoverage=99.4;identity=98.3;matches=3368;mismatches=58;indels=1;unknowns=0;locus=RLOC_00021720
Chr2	stalkie_big_nohaplotig	exon	132134403	132134613	100	+	.	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 3571 3781 -
Chr2	stalkie_big_nohaplotig	exon	132134615	132135097	96	+	.	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 2734 3216 -
Chr2	stalkie_big_nohaplotig	exon	132135166	132135298	87	+	.	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 2601 2733 -
Chr2	stalkie_big_nohaplotig	exon	132135361	132135444	97	+	.	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 2517 2600 -
Chr2	stalkie_big_nohaplotig	exon	132135501	132135584	88	+	.	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 2433 2516 -
Chr2	stalkie_big_nohaplotig	exon	132135647	132135730	96	+	.	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 2349 2432 -
Chr2	stalkie_big_nohaplotig	exon	132135791	132135848	94	+	.	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 2291 2348 -
Chr2	stalkie_big_nohaplotig	exon	132136715	132136740	100	+	.	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 2265 2290 -
Chr2	stalkie_big_nohaplotig	exon	132136802	132136885	100	+	.	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 2181 2264 -
Chr2	stalkie_big_nohaplotig	exon	132139115	132139198	100	+	.	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 2097 2180 -
Chr2	stalkie_big_nohaplotig	exon	132139260	132139345	100	+	.	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 2011 2096 -
Chr2	stalkie_big_nohaplotig	exon	132139398	132139543	100	+	.	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 1865 2010 -
Chr2	stalkie_big_nohaplotig	exon	132140087	132141950	99	+	.	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 2 1864 -
Chr2	stalkie_big_nohaplotig	CDS	132134775	132135097	.	+	0	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 2734 3056 .
Chr2	stalkie_big_nohaplotig	CDS	132135166	132135298	.	+	1	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 2601 2733 .
Chr2	stalkie_big_nohaplotig	CDS	132135361	132135444	.	+	0	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 2517 2600 .
Chr2	stalkie_big_nohaplotig	CDS	132135501	132135584	.	+	0	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 2433 2516 .
Chr2	stalkie_big_nohaplotig	CDS	132135647	132135730	.	+	0	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 2349 2432 .
Chr2	stalkie_big_nohaplotig	CDS	132135791	132135848	.	+	0	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 2291 2348 .
Chr2	stalkie_big_nohaplotig	CDS	132136715	132136740	.	+	2	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 2265 2290 .
Chr2	stalkie_big_nohaplotig	CDS	132136802	132136885	.	+	0	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 2181 2264 .
Chr2	stalkie_big_nohaplotig	CDS	132139115	132139198	.	+	0	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 2097 2180 .
Chr2	stalkie_big_nohaplotig	CDS	132139260	132139345	.	+	0	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 2011 2096 .
Chr2	stalkie_big_nohaplotig	CDS	132139398	132139543	.	+	1	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 1865 2010 .
Chr2	stalkie_big_nohaplotig	CDS	132140087	132140571	.	+	2	Parent=comp163873_c0_seq1.mrna1;Target=comp163873_c0_seq1 1380 1864 .
Chr2	stalkie_big_nohaplotig	mRNA	132134766	132173289	.	+	.	ID=FBgn0020309.5.mrna1;geneID=FBgn0020309.5.path1;Name=FBgn0020309.5;Dir=indeterminatecoverage=100.0;identity=97.5;matches=1641;mismatches=42;indels=0;unknowns=0;locus=RLOC_00021720
Chr2	stalkie_big_nohaplotig	exon	132134766	132134954	98	+	.	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 189 1 .
Chr2	stalkie_big_nohaplotig	exon	132137290	132137432	93	+	.	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 332 190 .
Chr2	stalkie_big_nohaplotig	exon	132137501	132137633	85	+	.	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 465 333 .
Chr2	stalkie_big_nohaplotig	exon	132137695	132137778	98	+	.	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 549 466 .
Chr2	stalkie_big_nohaplotig	exon	132137835	132137918	88	+	.	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 633 550 .
Chr2	stalkie_big_nohaplotig	exon	132137981	132138064	98	+	.	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 717 634 .
Chr2	stalkie_big_nohaplotig	exon	132138125	132138166	100	+	.	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 759 718 .
Chr2	stalkie_big_nohaplotig	exon	132144978	132145019	100	+	.	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 801 760 .
Chr2	stalkie_big_nohaplotig	exon	132169523	132169606	100	+	.	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 885 802 .
Chr2	stalkie_big_nohaplotig	exon	132171836	132171919	100	+	.	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 969 886 .
Chr2	stalkie_big_nohaplotig	exon	132171981	132172066	100	+	.	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 1055 970 .
Chr2	stalkie_big_nohaplotig	exon	132172119	132172264	100	+	.	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 1201 1056 .
Chr2	stalkie_big_nohaplotig	exon	132172808	132173289	100	+	.	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 1683 1202 .
Chr2	stalkie_big_nohaplotig	CDS	132134766	132134954	.	+	0	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 189 1 .
Chr2	stalkie_big_nohaplotig	CDS	132137290	132137432	.	+	0	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 332 190 .
Chr2	stalkie_big_nohaplotig	CDS	132137501	132137633	.	+	1	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 465 333 .
Chr2	stalkie_big_nohaplotig	CDS	132137695	132137778	.	+	0	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 549 466 .
Chr2	stalkie_big_nohaplotig	CDS	132137835	132137918	.	+	0	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 633 550 .
Chr2	stalkie_big_nohaplotig	CDS	132137981	132138064	.	+	0	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 717 634 .
Chr2	stalkie_big_nohaplotig	CDS	132138125	132138166	.	+	0	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 759 718 .
Chr2	stalkie_big_nohaplotig	CDS	132144978	132145019	.	+	0	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 801 760 .
Chr2	stalkie_big_nohaplotig	CDS	132169523	132169606	.	+	0	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 885 802 .
Chr2	stalkie_big_nohaplotig	CDS	132171836	132171919	.	+	0	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 969 886 .
Chr2	stalkie_big_nohaplotig	CDS	132171981	132172066	.	+	0	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 1055 970 .
Chr2	stalkie_big_nohaplotig	CDS	132172119	132172264	.	+	1	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 1201 1056 .
Chr2	stalkie_big_nohaplotig	CDS	132172808	132173289	.	+	2	Parent=FBgn0020309.5.mrna1;Target=FBgn0020309.5 1683 1202 .
Chr2	gffcl	locus	132147037	132148981	.	-	.	ID=RLOC_00021721;geneIDs=comp163812_c0_seq1.path6;transcripts=comp163812_c0_seq1.mrna6
Chr2	stalkie_big_nohaplotig	mRNA	132147037	132148981	.	-	.	ID=comp163812_c0_seq1.mrna6;geneID=comp163812_c0_seq1.path6;Name=comp163812_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=1906;mismatches=39;indels=0;unknowns=0;Target=comp163812_c0_seq1 1945 1 .;CDS_Target=comp163812_c0_seq1 1945 2 .;locus=RLOC_00021721
Chr2	stalkie_big_nohaplotig	exon	132147037	132148981	97	-	.	Parent=comp163812_c0_seq1.mrna6
Chr2	stalkie_big_nohaplotig	CDS	132147037	132148980	.	-	0	Parent=comp163812_c0_seq1.mrna6
Chr2	gffcl	locus	132162154	132196052	.	+	.	ID=RLOC_00021722;geneIDs=comp163691_c0_seq1.path2;transcripts=comp163691_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	132162154	132196052	.	+	.	ID=comp163691_c0_seq1.mrna2;geneID=comp163691_c0_seq1.path2;Name=comp163691_c0_seq1;Dir=indeterminatecoverage=69.9;identity=96.7;matches=1265;mismatches=43;indels=0;unknowns=0;Target=comp163691_c0_seq1 919 656 .;locus=RLOC_00021722
Chr2	stalkie_big_nohaplotig	exon	132162154	132163411	97	+	.	Parent=comp163691_c0_seq1.mrna2;Target=comp163691_c0_seq1 1601 344 .
Chr2	stalkie_big_nohaplotig	exon	132168492	132168512	71	+	.	Parent=comp163691_c0_seq1.mrna2;Target=comp163691_c0_seq1 1622 1602 .
Chr2	stalkie_big_nohaplotig	exon	132174309	132174314	100	+	.	Parent=comp163691_c0_seq1.mrna2;Target=comp163691_c0_seq1 1630 1625 .
Chr2	stalkie_big_nohaplotig	exon	132175533	132175537	100	+	.	Parent=comp163691_c0_seq1.mrna2;Target=comp163691_c0_seq1 1635 1631 .
Chr2	stalkie_big_nohaplotig	exon	132183060	132183063	100	+	.	Parent=comp163691_c0_seq1.mrna2;Target=comp163691_c0_seq1 1639 1636 .
Chr2	stalkie_big_nohaplotig	exon	132188853	132188860	100	+	.	Parent=comp163691_c0_seq1.mrna2;Target=comp163691_c0_seq1 1647 1640 .
Chr2	stalkie_big_nohaplotig	exon	132196047	132196052	83	+	.	Parent=comp163691_c0_seq1.mrna2;Target=comp163691_c0_seq1 1653 1648 .
Chr2	stalkie_big_nohaplotig	CDS	132162466	132162729	.	+	0	Parent=comp163691_c0_seq1.mrna2
Chr2	gffcl	locus	132179268	132179832	.	+	.	ID=RLOC_00021723;geneIDs=comp148666_c0_seq1.path1;transcripts=comp148666_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132179268	132179832	.	+	.	ID=comp148666_c0_seq1.mrna1;geneID=comp148666_c0_seq1.path1;Name=comp148666_c0_seq1;Dir=sensecoverage=100.0;identity=96.2;matches=226;mismatches=9;indels=0;unknowns=0;locus=RLOC_00021723
Chr2	stalkie_big_nohaplotig	exon	132179268	132179282	100	+	.	Parent=comp148666_c0_seq1.mrna1;Target=comp148666_c0_seq1 1 15 +
Chr2	stalkie_big_nohaplotig	exon	132179353	132179436	98	+	.	Parent=comp148666_c0_seq1.mrna1;Target=comp148666_c0_seq1 16 99 +
Chr2	stalkie_big_nohaplotig	exon	132179493	132179576	98	+	.	Parent=comp148666_c0_seq1.mrna1;Target=comp148666_c0_seq1 100 183 +
Chr2	stalkie_big_nohaplotig	exon	132179781	132179832	86	+	.	Parent=comp148666_c0_seq1.mrna1;Target=comp148666_c0_seq1 184 235 +
Chr2	stalkie_big_nohaplotig	CDS	132179268	132179282	.	+	0	Parent=comp148666_c0_seq1.mrna1;Target=comp148666_c0_seq1 1 15 +
Chr2	stalkie_big_nohaplotig	CDS	132179353	132179436	.	+	0	Parent=comp148666_c0_seq1.mrna1;Target=comp148666_c0_seq1 16 99 +
Chr2	stalkie_big_nohaplotig	CDS	132179493	132179576	.	+	0	Parent=comp148666_c0_seq1.mrna1;Target=comp148666_c0_seq1 100 183 +
Chr2	stalkie_big_nohaplotig	CDS	132179781	132179831	.	+	0	Parent=comp148666_c0_seq1.mrna1;Target=comp148666_c0_seq1 184 234 +
Chr2	gffcl	locus	132183955	132184283	.	+	.	ID=RLOC_00021724;geneIDs=comp114505_c0_seq1.path1;transcripts=comp114505_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132183955	132184283	.	+	.	ID=comp114505_c0_seq1.mrna1;geneID=comp114505_c0_seq1.path1;Name=comp114505_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=329;mismatches=0;indels=0;unknowns=0;Target=comp114505_c0_seq1 329 1 .;CDS_Target=comp114505_c0_seq1 161 96 .;locus=RLOC_00021724
Chr2	stalkie_big_nohaplotig	exon	132183955	132184283	100	+	.	Parent=comp114505_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	132184050	132184115	.	+	0	Parent=comp114505_c0_seq1.mrna1
Chr2	gffcl	locus	132197768	132198675	.	-	.	ID=RLOC_00021725;geneIDs=FBgn0262534.1.path6;transcripts=FBgn0262534.1.mrna6
Chr2	stalkie_big_nohaplotig	mRNA	132197768	132198675	.	-	.	ID=FBgn0262534.1.mrna6;geneID=FBgn0262534.1.path6;Name=FBgn0262534.1;Dir=sensecoverage=98.5;identity=98.6;matches=787;mismatches=11;indels=0;unknowns=0;locus=RLOC_00021725
Chr2	stalkie_big_nohaplotig	exon	132197768	132197940	98	-	.	Parent=FBgn0262534.1.mrna6;Target=FBgn0262534.1 626 798 +
Chr2	stalkie_big_nohaplotig	exon	132197994	132198209	98	-	.	Parent=FBgn0262534.1.mrna6;Target=FBgn0262534.1 410 625 +
Chr2	stalkie_big_nohaplotig	exon	132198267	132198675	98	-	.	Parent=FBgn0262534.1.mrna6;Target=FBgn0262534.1 1 409 +
Chr2	stalkie_big_nohaplotig	CDS	132197768	132197940	.	-	2	Parent=FBgn0262534.1.mrna6;Target=FBgn0262534.1 626 798 +
Chr2	stalkie_big_nohaplotig	CDS	132197994	132198209	.	-	2	Parent=FBgn0262534.1.mrna6;Target=FBgn0262534.1 410 625 +
Chr2	stalkie_big_nohaplotig	CDS	132198267	132198675	.	-	0	Parent=FBgn0262534.1.mrna6;Target=FBgn0262534.1 1 409 +
Chr2	gffcl	locus	132202082	132202424	.	-	.	ID=RLOC_00021726;geneIDs=comp115154_c0_seq1.path2;transcripts=comp115154_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	132202082	132202424	.	-	.	ID=comp115154_c0_seq1.mrna2;geneID=comp115154_c0_seq1.path2;Name=comp115154_c0_seq1;Dir=indeterminatecoverage=99.4;identity=97.4;matches=334;mismatches=5;indels=4;unknowns=0;Target=comp115154_c0_seq1 339 1 .;CDS_Target=comp115154_c0_seq1 141 1 .;locus=RLOC_00021726
Chr2	stalkie_big_nohaplotig	exon	132202082	132202424	97	-	.	Parent=comp115154_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	132202284	132202424	.	-	0	Parent=comp115154_c0_seq1.mrna2
Chr2	gffcl	locus	132228725	132235431	.	+	.	ID=RLOC_00021727;geneIDs=Dv_FBgn0201266.7.path1,comp161108_c0_seq1.path1;transcripts=comp161108_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132228725	132235431	.	+	.	ID=comp161108_c0_seq1.mrna1;geneID=comp161108_c0_seq1.path1;Name=comp161108_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=2601;mismatches=1;indels=3;unknowns=0;locus=RLOC_00021727
Chr2	stalkie_big_nohaplotig	exon	132228725	132229005	98	+	.	Parent=comp161108_c0_seq1.mrna1;Target=comp161108_c0_seq1 284 1 .
Chr2	stalkie_big_nohaplotig	exon	132232342	132232561	100	+	.	Parent=comp161108_c0_seq1.mrna1;Target=comp161108_c0_seq1 504 285 .
Chr2	stalkie_big_nohaplotig	exon	132232625	132233024	100	+	.	Parent=comp161108_c0_seq1.mrna1;Target=comp161108_c0_seq1 904 505 .
Chr2	stalkie_big_nohaplotig	exon	132233081	132233183	100	+	.	Parent=comp161108_c0_seq1.mrna1;Target=comp161108_c0_seq1 1007 905 .
Chr2	stalkie_big_nohaplotig	exon	132233234	132233775	100	+	.	Parent=comp161108_c0_seq1.mrna1;Target=comp161108_c0_seq1 1549 1008 .
Chr2	stalkie_big_nohaplotig	exon	132234092	132234223	100	+	.	Parent=comp161108_c0_seq1.mrna1;Target=comp161108_c0_seq1 1681 1550 .
Chr2	stalkie_big_nohaplotig	exon	132234449	132234576	100	+	.	Parent=comp161108_c0_seq1.mrna1;Target=comp161108_c0_seq1 1809 1682 .
Chr2	stalkie_big_nohaplotig	exon	132234636	132235431	100	+	.	Parent=comp161108_c0_seq1.mrna1;Target=comp161108_c0_seq1 2605 1810 .
Chr2	stalkie_big_nohaplotig	CDS	132228725	132229005	.	+	0	Parent=comp161108_c0_seq1.mrna1;Target=comp161108_c0_seq1 284 1 .
Chr2	stalkie_big_nohaplotig	CDS	132232342	132232561	.	+	1	Parent=comp161108_c0_seq1.mrna1;Target=comp161108_c0_seq1 504 285 .
Chr2	stalkie_big_nohaplotig	CDS	132232625	132233024	.	+	0	Parent=comp161108_c0_seq1.mrna1;Target=comp161108_c0_seq1 904 505 .
Chr2	stalkie_big_nohaplotig	CDS	132233081	132233183	.	+	2	Parent=comp161108_c0_seq1.mrna1;Target=comp161108_c0_seq1 1007 905 .
Chr2	stalkie_big_nohaplotig	CDS	132233234	132233775	.	+	1	Parent=comp161108_c0_seq1.mrna1;Target=comp161108_c0_seq1 1549 1008 .
Chr2	stalkie_big_nohaplotig	CDS	132234092	132234189	.	+	2	Parent=comp161108_c0_seq1.mrna1;Target=comp161108_c0_seq1 1647 1550 .
Chr2	gffcl	locus	132230658	132231494	.	-	.	ID=RLOC_00021728;geneIDs=comp155170_c5_seq1.path1;transcripts=comp155170_c5_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132230658	132231494	.	-	.	ID=comp155170_c5_seq1.mrna1;geneID=comp155170_c5_seq1.path1;Name=comp155170_c5_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=836;mismatches=1;indels=0;unknowns=0;Target=comp155170_c5_seq1 837 1 .;CDS_Target=comp155170_c5_seq1 792 631 .;locus=RLOC_00021728
Chr2	stalkie_big_nohaplotig	exon	132230658	132231494	99	-	.	Parent=comp155170_c5_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	132230703	132230864	.	-	0	Parent=comp155170_c5_seq1.mrna1
Chr2	gffcl	locus	132241364	132241505	.	+	.	ID=RLOC_00021729;geneIDs=comp202096_c0_seq1.path2;transcripts=comp202096_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	132241364	132241505	.	+	.	ID=comp202096_c0_seq1.mrna2;geneID=comp202096_c0_seq1.path2;Name=comp202096_c0_seq1;Dir=antisensecoverage=40.1;identity=100.0;matches=81;mismatches=0;indels=0;unknowns=0;Target=comp202096_c0_seq1 122 141 .;locus=RLOC_00021729
Chr2	stalkie_big_nohaplotig	exon	132241364	132241397	100	+	.	Parent=comp202096_c0_seq1.mrna2;Target=comp202096_c0_seq1 169 202 -
Chr2	stalkie_big_nohaplotig	exon	132241459	132241505	100	+	.	Parent=comp202096_c0_seq1.mrna2;Target=comp202096_c0_seq1 122 168 -
Chr2	stalkie_big_nohaplotig	CDS	132241486	132241505	.	+	2	Parent=comp202096_c0_seq1.mrna2
Chr2	gffcl	locus	132253655	132254505	.	+	.	ID=RLOC_00021730;geneIDs=comp112994_c0_seq1.path1;transcripts=comp112994_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132253655	132254505	.	+	.	ID=comp112994_c0_seq1.mrna1;geneID=comp112994_c0_seq1.path1;Name=comp112994_c0_seq1;Dir=antisensecoverage=99.9;identity=100.0;matches=720;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021730
Chr2	stalkie_big_nohaplotig	exon	132253655	132254178	100	+	.	Parent=comp112994_c0_seq1.mrna1;Target=comp112994_c0_seq1 197 720 -
Chr2	stalkie_big_nohaplotig	exon	132254246	132254366	100	+	.	Parent=comp112994_c0_seq1.mrna1;Target=comp112994_c0_seq1 76 196 -
Chr2	stalkie_big_nohaplotig	exon	132254431	132254505	100	+	.	Parent=comp112994_c0_seq1.mrna1;Target=comp112994_c0_seq1 1 75 -
Chr2	stalkie_big_nohaplotig	CDS	132253829	132254178	.	+	0	Parent=comp112994_c0_seq1.mrna1;Target=comp112994_c0_seq1 197 546 .
Chr2	stalkie_big_nohaplotig	CDS	132254246	132254366	.	+	1	Parent=comp112994_c0_seq1.mrna1;Target=comp112994_c0_seq1 76 196 .
Chr2	stalkie_big_nohaplotig	CDS	132254431	132254505	.	+	0	Parent=comp112994_c0_seq1.mrna1;Target=comp112994_c0_seq1 1 75 .
Chr2	gffcl	locus	132262939	132263277	.	-	.	ID=RLOC_00021731;geneIDs=comp145325_c0_seq1.path1;transcripts=comp145325_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132262939	132263277	.	-	.	ID=comp145325_c0_seq1.mrna1;geneID=comp145325_c0_seq1.path1;Name=comp145325_c0_seq1;Dir=indeterminatecoverage=93.9;identity=99.1;matches=336;mismatches=3;indels=0;unknowns=0;Target=comp145325_c0_seq1 361 23 .;CDS_Target=comp145325_c0_seq1 87 25 .;locus=RLOC_00021731
Chr2	stalkie_big_nohaplotig	exon	132262939	132263277	99	-	.	Parent=comp145325_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	132263213	132263275	.	-	0	Parent=comp145325_c0_seq1.mrna1
Chr2	gffcl	locus	132289055	132292325	.	+	.	ID=RLOC_00021732;geneIDs=FBgn0003567.3.path1;transcripts=FBgn0003567.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132289055	132292325	.	+	.	ID=FBgn0003567.3.mrna1;geneID=FBgn0003567.3.path1;Name=FBgn0003567.3;Dir=sensecoverage=100.0;identity=99.6;matches=2794;mismatches=8;indels=3;unknowns=0;locus=RLOC_00021732
Chr2	stalkie_big_nohaplotig	exon	132289055	132289377	100	+	.	Parent=FBgn0003567.3.mrna1;Target=FBgn0003567.3 1 323 +
Chr2	stalkie_big_nohaplotig	exon	132289444	132289576	100	+	.	Parent=FBgn0003567.3.mrna1;Target=FBgn0003567.3 324 456 +
Chr2	stalkie_big_nohaplotig	exon	132289635	132289807	100	+	.	Parent=FBgn0003567.3.mrna1;Target=FBgn0003567.3 457 629 +
Chr2	stalkie_big_nohaplotig	exon	132289868	132290001	100	+	.	Parent=FBgn0003567.3.mrna1;Target=FBgn0003567.3 630 763 +
Chr2	stalkie_big_nohaplotig	exon	132290222	132292053	99	+	.	Parent=FBgn0003567.3.mrna1;Target=FBgn0003567.3 764 2598 +
Chr2	stalkie_big_nohaplotig	exon	132292119	132292325	100	+	.	Parent=FBgn0003567.3.mrna1;Target=FBgn0003567.3 2599 2805 +
Chr2	stalkie_big_nohaplotig	CDS	132289055	132289377	.	+	0	Parent=FBgn0003567.3.mrna1;Target=FBgn0003567.3 1 323 +
Chr2	stalkie_big_nohaplotig	CDS	132289444	132289576	.	+	1	Parent=FBgn0003567.3.mrna1;Target=FBgn0003567.3 324 456 +
Chr2	stalkie_big_nohaplotig	CDS	132289635	132289807	.	+	0	Parent=FBgn0003567.3.mrna1;Target=FBgn0003567.3 457 629 +
Chr2	stalkie_big_nohaplotig	CDS	132289868	132290001	.	+	1	Parent=FBgn0003567.3.mrna1;Target=FBgn0003567.3 630 763 +
Chr2	stalkie_big_nohaplotig	CDS	132290222	132292053	.	+	2	Parent=FBgn0003567.3.mrna1;Target=FBgn0003567.3 764 2598 +
Chr2	stalkie_big_nohaplotig	CDS	132292119	132292325	.	+	0	Parent=FBgn0003567.3.mrna1;Target=FBgn0003567.3 2599 2805 +
Chr2	gffcl	locus	132295416	132295832	.	+	.	ID=RLOC_00021733;geneIDs=comp146449_c0_seq1.path1;transcripts=comp146449_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132295416	132295832	.	+	.	ID=comp146449_c0_seq1.mrna1;geneID=comp146449_c0_seq1.path1;Name=comp146449_c0_seq1;Dir=indeterminatecoverage=96.7;identity=91.8;matches=382;mismatches=17;indels=17;unknowns=0;Target=comp146449_c0_seq1 259 152 .;locus=RLOC_00021733
Chr2	stalkie_big_nohaplotig	exon	132295416	132295495	95	+	.	Parent=comp146449_c0_seq1.mrna1;Target=comp146449_c0_seq1 97 17 .
Chr2	stalkie_big_nohaplotig	exon	132295500	132295772	90	+	.	Parent=comp146449_c0_seq1.mrna1;Target=comp146449_c0_seq1 413 135 .
Chr2	stalkie_big_nohaplotig	exon	132295780	132295832	92	+	.	Parent=comp146449_c0_seq1.mrna1;Target=comp146449_c0_seq1 489 441 .
Chr2	stalkie_big_nohaplotig	CDS	132295517	132295624	.	+	0	Parent=comp146449_c0_seq1.mrna1
Chr2	gffcl	locus	132321878	132322662	.	-	.	ID=RLOC_00021735;geneIDs=comp142289_c0_seq1.path1;transcripts=comp142289_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132321878	132322662	.	-	.	ID=comp142289_c0_seq1.mrna1;geneID=comp142289_c0_seq1.path1;Name=comp142289_c0_seq1;Dir=indeterminatecoverage=86.3;identity=93.5;matches=751;mismatches=34;indels=18;unknowns=0;Target=comp142289_c0_seq1 931 129 .;CDS_Target=comp142289_c0_seq1 436 338 .;locus=RLOC_00021735
Chr2	stalkie_big_nohaplotig	exon	132321878	132322662	93	-	.	Parent=comp142289_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	132322365	132322463	.	-	0	Parent=comp142289_c0_seq1.mrna1
Chr2	gffcl	locus	132340108	132340525	.	+	.	ID=RLOC_00021736;geneIDs=FBgn0013347.1.path1;transcripts=FBgn0013347.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132340108	132340525	.	+	.	ID=FBgn0013347.1.mrna1;geneID=FBgn0013347.1.path1;Name=FBgn0013347.1;Dir=sensecoverage=100.0;identity=100.0;matches=363;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021736
Chr2	stalkie_big_nohaplotig	exon	132340108	132340191	100	+	.	Parent=FBgn0013347.1.mrna1;Target=FBgn0013347.1 1 84 +
Chr2	stalkie_big_nohaplotig	exon	132340247	132340525	100	+	.	Parent=FBgn0013347.1.mrna1;Target=FBgn0013347.1 85 363 +
Chr2	stalkie_big_nohaplotig	CDS	132340108	132340191	.	+	0	Parent=FBgn0013347.1.mrna1;Target=FBgn0013347.1 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	132340247	132340525	.	+	0	Parent=FBgn0013347.1.mrna1;Target=FBgn0013347.1 85 363 +
Chr2	gffcl	locus	132340914	132341364	.	+	.	ID=RLOC_00021737;geneIDs=FBgn0013347.3.path1;transcripts=FBgn0013347.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132340914	132341364	.	+	.	ID=FBgn0013347.3.mrna1;geneID=FBgn0013347.3.path1;Name=FBgn0013347.3;Dir=sensecoverage=96.8;identity=99.7;matches=394;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021737
Chr2	stalkie_big_nohaplotig	exon	132340914	132341038	99	+	.	Parent=FBgn0013347.3.mrna1;Target=FBgn0013347.3 14 138 +
Chr2	stalkie_big_nohaplotig	exon	132341095	132341364	100	+	.	Parent=FBgn0013347.3.mrna1;Target=FBgn0013347.3 139 408 +
Chr2	stalkie_big_nohaplotig	CDS	132340916	132341038	.	+	0	Parent=FBgn0013347.3.mrna1;Target=FBgn0013347.3 16 138 +
Chr2	stalkie_big_nohaplotig	CDS	132341095	132341364	.	+	0	Parent=FBgn0013347.3.mrna1;Target=FBgn0013347.3 139 408 +
Chr2	gffcl	locus	132342064	132342465	.	+	.	ID=RLOC_00021738;geneIDs=FBgn0013347.4.path1;transcripts=FBgn0013347.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132342064	132342465	.	+	.	ID=FBgn0013347.4.mrna1;geneID=FBgn0013347.4.path1;Name=FBgn0013347.4;Dir=sensecoverage=100.0;identity=100.0;matches=345;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021738
Chr2	stalkie_big_nohaplotig	exon	132342064	132342156	100	+	.	Parent=FBgn0013347.4.mrna1;Target=FBgn0013347.4 1 93 +
Chr2	stalkie_big_nohaplotig	exon	132342214	132342465	100	+	.	Parent=FBgn0013347.4.mrna1;Target=FBgn0013347.4 94 345 +
Chr2	stalkie_big_nohaplotig	CDS	132342064	132342156	.	+	0	Parent=FBgn0013347.4.mrna1;Target=FBgn0013347.4 1 93 +
Chr2	stalkie_big_nohaplotig	CDS	132342214	132342465	.	+	0	Parent=FBgn0013347.4.mrna1;Target=FBgn0013347.4 94 345 +
Chr2	gffcl	locus	132345002	132345520	.	+	.	ID=RLOC_00021739;geneIDs=comp135787_c0_seq1.path1;transcripts=comp135787_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132345002	132345520	.	+	.	ID=comp135787_c0_seq1.mrna1;geneID=comp135787_c0_seq1.path1;Name=comp135787_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.6;matches=517;mismatches=2;indels=0;unknowns=0;Target=comp135787_c0_seq1 519 1 .;CDS_Target=comp135787_c0_seq1 413 282 .;locus=RLOC_00021739
Chr2	stalkie_big_nohaplotig	exon	132345002	132345520	99	+	.	Parent=comp135787_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	132345283	132345414	.	+	0	Parent=comp135787_c0_seq1.mrna1
Chr2	gffcl	locus	132364446	132366275	.	+	.	ID=RLOC_00021740;geneIDs=ORF555.path2;transcripts=ORF555.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	132364446	132366275	.	+	.	ID=ORF555.mrna2;geneID=ORF555.path2;Name=ORF555;Dir=sensecoverage=99.9;identity=99.7;matches=1653;mismatches=5;indels=0;unknowns=0;locus=RLOC_00021740
Chr2	stalkie_big_nohaplotig	exon	132364446	132364678	100	+	.	Parent=ORF555.mrna2;Target=ORF555 2 234 +
Chr2	stalkie_big_nohaplotig	exon	132364735	132366127	99	+	.	Parent=ORF555.mrna2;Target=ORF555 235 1627 +
Chr2	stalkie_big_nohaplotig	exon	132366244	132366275	100	+	.	Parent=ORF555.mrna2;Target=ORF555 1628 1659 +
Chr2	stalkie_big_nohaplotig	CDS	132364448	132364678	.	+	0	Parent=ORF555.mrna2;Target=ORF555 4 234 +
Chr2	stalkie_big_nohaplotig	CDS	132364735	132366127	.	+	0	Parent=ORF555.mrna2;Target=ORF555 235 1627 +
Chr2	stalkie_big_nohaplotig	CDS	132366244	132366275	.	+	2	Parent=ORF555.mrna2;Target=ORF555 1628 1659 +
Chr2	gffcl	locus	132419641	132436765	.	+	.	ID=RLOC_00021741;geneIDs=FBgn0025574.1.path1;transcripts=FBgn0025574.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132419641	132436765	.	+	.	ID=FBgn0025574.1.mrna1;geneID=FBgn0025574.1.path1;Name=FBgn0025574.1;Dir=sensecoverage=91.6;identity=100.0;matches=1261;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021741
Chr2	stalkie_big_nohaplotig	exon	132419641	132419733	100	+	.	Parent=FBgn0025574.1.mrna1;Target=FBgn0025574.1 117 209 +
Chr2	stalkie_big_nohaplotig	exon	132428176	132428407	100	+	.	Parent=FBgn0025574.1.mrna1;Target=FBgn0025574.1 210 441 +
Chr2	stalkie_big_nohaplotig	exon	132432191	132432382	100	+	.	Parent=FBgn0025574.1.mrna1;Target=FBgn0025574.1 442 633 +
Chr2	stalkie_big_nohaplotig	exon	132433987	132434175	100	+	.	Parent=FBgn0025574.1.mrna1;Target=FBgn0025574.1 634 822 +
Chr2	stalkie_big_nohaplotig	exon	132434236	132434334	100	+	.	Parent=FBgn0025574.1.mrna1;Target=FBgn0025574.1 823 921 +
Chr2	stalkie_big_nohaplotig	exon	132434416	132434569	100	+	.	Parent=FBgn0025574.1.mrna1;Target=FBgn0025574.1 922 1075 +
Chr2	stalkie_big_nohaplotig	exon	132434639	132434816	100	+	.	Parent=FBgn0025574.1.mrna1;Target=FBgn0025574.1 1076 1253 +
Chr2	stalkie_big_nohaplotig	exon	132436642	132436765	100	+	.	Parent=FBgn0025574.1.mrna1;Target=FBgn0025574.1 1254 1377 +
Chr2	stalkie_big_nohaplotig	CDS	132419642	132419733	.	+	0	Parent=FBgn0025574.1.mrna1;Target=FBgn0025574.1 118 209 +
Chr2	stalkie_big_nohaplotig	CDS	132428176	132428407	.	+	1	Parent=FBgn0025574.1.mrna1;Target=FBgn0025574.1 210 441 +
Chr2	stalkie_big_nohaplotig	CDS	132432191	132432382	.	+	0	Parent=FBgn0025574.1.mrna1;Target=FBgn0025574.1 442 633 +
Chr2	stalkie_big_nohaplotig	CDS	132433987	132434175	.	+	0	Parent=FBgn0025574.1.mrna1;Target=FBgn0025574.1 634 822 +
Chr2	stalkie_big_nohaplotig	CDS	132434236	132434334	.	+	0	Parent=FBgn0025574.1.mrna1;Target=FBgn0025574.1 823 921 +
Chr2	stalkie_big_nohaplotig	CDS	132434416	132434569	.	+	0	Parent=FBgn0025574.1.mrna1;Target=FBgn0025574.1 922 1075 +
Chr2	stalkie_big_nohaplotig	CDS	132434639	132434816	.	+	2	Parent=FBgn0025574.1.mrna1;Target=FBgn0025574.1 1076 1253 +
Chr2	stalkie_big_nohaplotig	CDS	132436642	132436765	.	+	1	Parent=FBgn0025574.1.mrna1;Target=FBgn0025574.1 1254 1377 +
Chr2	gffcl	locus	132438472	132439147	.	-	.	ID=RLOC_00021742;geneIDs=comp149249_c0_seq1.path1;transcripts=comp149249_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132438472	132439147	.	-	.	ID=comp149249_c0_seq1.mrna1;geneID=comp149249_c0_seq1.path1;Name=comp149249_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.7;matches=674;mismatches=2;indels=0;unknowns=0;Target=comp149249_c0_seq1 679 4 .;CDS_Target=comp149249_c0_seq1 399 343 .;locus=RLOC_00021742
Chr2	stalkie_big_nohaplotig	exon	132438472	132439147	99	-	.	Parent=comp149249_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	132438752	132438808	.	-	0	Parent=comp149249_c0_seq1.mrna1
Chr2	gffcl	locus	132444887	132445187	.	+	.	ID=RLOC_00021743;geneIDs=comp140547_c1_seq1.path1;transcripts=comp140547_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132444887	132445187	.	+	.	ID=comp140547_c1_seq1.mrna1;geneID=comp140547_c1_seq1.path1;Name=comp140547_c1_seq1;Dir=indeterminatecoverage=87.8;identity=99.3;matches=299;mismatches=2;indels=0;unknowns=0;Target=comp140547_c1_seq1 314 14 .;CDS_Target=comp140547_c1_seq1 80 15 .;locus=RLOC_00021743
Chr2	stalkie_big_nohaplotig	exon	132444887	132445187	99	+	.	Parent=comp140547_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	132444888	132444953	.	+	0	Parent=comp140547_c1_seq1.mrna1
Chr2	gffcl	locus	132446024	132447149	.	+	.	ID=RLOC_00021744;geneIDs=comp160153_c0_seq1.path1;transcripts=comp160153_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132446024	132447149	.	+	.	ID=comp160153_c0_seq1.mrna1;geneID=comp160153_c0_seq1.path1;Name=comp160153_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.6;matches=832;mismatches=29;indels=0;unknowns=0;Target=comp160153_c0_seq1 376 305 .;locus=RLOC_00021744
Chr2	stalkie_big_nohaplotig	exon	132446024	132446454	98	+	.	Parent=comp160153_c0_seq1.mrna1;Target=comp160153_c0_seq1 431 1 .
Chr2	stalkie_big_nohaplotig	exon	132446720	132447149	95	+	.	Parent=comp160153_c0_seq1.mrna1;Target=comp160153_c0_seq1 861 432 .
Chr2	stalkie_big_nohaplotig	CDS	132446328	132446399	.	+	0	Parent=comp160153_c0_seq1.mrna1
Chr2	gffcl	locus	132447185	132447506	.	-	.	ID=RLOC_00021745;geneIDs=comp135247_c0_seq1.path2;transcripts=comp135247_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	132447185	132447506	.	-	.	ID=comp135247_c0_seq1.mrna2;geneID=comp135247_c0_seq1.path2;Name=comp135247_c0_seq1;Dir=indeterminatecoverage=79.8;identity=94.8;matches=310;mismatches=12;indels=5;unknowns=0;Target=comp135247_c0_seq1 410 84 .;locus=RLOC_00021745
Chr2	stalkie_big_nohaplotig	exon	132447185	132447506	94	-	.	Parent=comp135247_c0_seq1.mrna2
Chr2	gffcl	locus	132451374	132514230	.	-	.	ID=RLOC_00021746;geneIDs=FBgn0085384.1.path1;transcripts=FBgn0085384.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132451374	132514230	.	-	.	ID=FBgn0085384.1.mrna1;geneID=FBgn0085384.1.path1;Name=FBgn0085384.1;Dir=sensecoverage=100.0;identity=99.8;matches=2359;mismatches=5;indels=0;unknowns=0;locus=RLOC_00021746
Chr2	stalkie_big_nohaplotig	exon	132451374	132451535	100	-	.	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 2203 2364 +
Chr2	stalkie_big_nohaplotig	exon	132451600	132451763	99	-	.	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 2039 2202 +
Chr2	stalkie_big_nohaplotig	exon	132451835	132451965	100	-	.	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 1908 2038 +
Chr2	stalkie_big_nohaplotig	exon	132452027	132452298	99	-	.	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 1636 1907 +
Chr2	stalkie_big_nohaplotig	exon	132452363	132452577	100	-	.	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 1421 1635 +
Chr2	stalkie_big_nohaplotig	exon	132453990	132454317	100	-	.	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 1093 1420 +
Chr2	stalkie_big_nohaplotig	exon	132454658	132454858	100	-	.	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 892 1092 +
Chr2	stalkie_big_nohaplotig	exon	132457239	132457457	100	-	.	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 673 891 +
Chr2	stalkie_big_nohaplotig	exon	132464057	132464168	100	-	.	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 561 672 +
Chr2	stalkie_big_nohaplotig	exon	132481554	132481705	99	-	.	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 409 560 +
Chr2	stalkie_big_nohaplotig	exon	132481822	132481898	100	-	.	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 332 408 +
Chr2	stalkie_big_nohaplotig	exon	132513900	132514230	99	-	.	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 1 331 +
Chr2	stalkie_big_nohaplotig	CDS	132451374	132451535	.	-	0	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 2203 2364 +
Chr2	stalkie_big_nohaplotig	CDS	132451600	132451763	.	-	2	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 2039 2202 +
Chr2	stalkie_big_nohaplotig	CDS	132451835	132451965	.	-	1	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 1908 2038 +
Chr2	stalkie_big_nohaplotig	CDS	132452027	132452298	.	-	0	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 1636 1907 +
Chr2	stalkie_big_nohaplotig	CDS	132452363	132452577	.	-	2	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 1421 1635 +
Chr2	stalkie_big_nohaplotig	CDS	132453990	132454317	.	-	0	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 1093 1420 +
Chr2	stalkie_big_nohaplotig	CDS	132454658	132454858	.	-	0	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 892 1092 +
Chr2	stalkie_big_nohaplotig	CDS	132457239	132457457	.	-	0	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 673 891 +
Chr2	stalkie_big_nohaplotig	CDS	132464057	132464168	.	-	1	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 561 672 +
Chr2	stalkie_big_nohaplotig	CDS	132481554	132481705	.	-	0	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 409 560 +
Chr2	stalkie_big_nohaplotig	CDS	132481822	132481898	.	-	2	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 332 408 +
Chr2	stalkie_big_nohaplotig	CDS	132513900	132514230	.	-	0	Parent=FBgn0085384.1.mrna1;Target=FBgn0085384.1 1 331 +
Chr2	gffcl	locus	132514891	132515876	.	-	.	ID=RLOC_00021747;geneIDs=comp142513_c0_seq1.path1;transcripts=comp142513_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132514891	132515876	.	-	.	ID=comp142513_c0_seq1.mrna1;geneID=comp142513_c0_seq1.path1;Name=comp142513_c0_seq1;Dir=sensecoverage=99.7;identity=100.0;matches=650;mismatches=0;indels=0;unknowns=0;Target=comp142513_c0_seq1 282 359 +;locus=RLOC_00021747
Chr2	stalkie_big_nohaplotig	exon	132514891	132515360	100	-	.	Parent=comp142513_c0_seq1.mrna1;Target=comp142513_c0_seq1 183 652 +
Chr2	stalkie_big_nohaplotig	exon	132515697	132515876	100	-	.	Parent=comp142513_c0_seq1.mrna1;Target=comp142513_c0_seq1 3 182 +
Chr2	stalkie_big_nohaplotig	CDS	132515184	132515261	.	-	0	Parent=comp142513_c0_seq1.mrna1
Chr2	gffcl	locus	132523397	132525334	.	+	.	ID=RLOC_00021748;geneIDs=comp159398_c0_seq1.path1;transcripts=comp159398_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132523397	132525334	.	+	.	ID=comp159398_c0_seq1.mrna1;geneID=comp159398_c0_seq1.path1;Name=comp159398_c0_seq1;Dir=sensecoverage=99.9;identity=97.7;matches=1516;mismatches=12;indels=23;unknowns=0;locus=RLOC_00021748
Chr2	stalkie_big_nohaplotig	exon	132523397	132524071	95	+	.	Parent=comp159398_c0_seq1.mrna1;Target=comp159398_c0_seq1 2 654 +
Chr2	stalkie_big_nohaplotig	exon	132524460	132525334	99	+	.	Parent=comp159398_c0_seq1.mrna1;Target=comp159398_c0_seq1 655 1530 +
Chr2	stalkie_big_nohaplotig	CDS	132523933	132524071	.	+	0	Parent=comp159398_c0_seq1.mrna1;Target=comp159398_c0_seq1 516 654 +
Chr2	stalkie_big_nohaplotig	CDS	132524460	132525018	.	+	2	Parent=comp159398_c0_seq1.mrna1;Target=comp159398_c0_seq1 655 1214 +
Chr2	gffcl	locus	132525665	132527059	.	+	.	ID=RLOC_00021749;geneIDs=comp160903_c0_seq1.path1;transcripts=comp160903_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132525665	132527059	.	+	.	ID=comp160903_c0_seq1.mrna1;geneID=comp160903_c0_seq1.path1;Name=comp160903_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1392;mismatches=1;indels=5;unknowns=0;Target=comp160903_c0_seq1 1396 1 .;CDS_Target=comp160903_c0_seq1 621 493 .;locus=RLOC_00021749
Chr2	stalkie_big_nohaplotig	exon	132525665	132527059	99	+	.	Parent=comp160903_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	132526156	132526284	.	+	0	Parent=comp160903_c0_seq1.mrna1
Chr2	gffcl	locus	132529221	132549702	.	+	.	ID=RLOC_00021750;geneIDs=FBgn0260634.1.path1;transcripts=FBgn0260634.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132529221	132549702	.	+	.	ID=FBgn0260634.1.mrna1;geneID=FBgn0260634.1.path1;Name=FBgn0260634.1;Dir=sensecoverage=100.0;identity=99.7;matches=6405;mismatches=12;indels=6;unknowns=0;locus=RLOC_00021750
Chr2	stalkie_big_nohaplotig	exon	132529221	132529435	100	+	.	Parent=FBgn0260634.1.mrna1;Target=FBgn0260634.1 1 215 +
Chr2	stalkie_big_nohaplotig	exon	132541186	132542912	99	+	.	Parent=FBgn0260634.1.mrna1;Target=FBgn0260634.1 216 1942 +
Chr2	stalkie_big_nohaplotig	exon	132543539	132543838	99	+	.	Parent=FBgn0260634.1.mrna1;Target=FBgn0260634.1 1943 2242 +
Chr2	stalkie_big_nohaplotig	exon	132543967	132544623	98	+	.	Parent=FBgn0260634.1.mrna1;Target=FBgn0260634.1 2243 2905 +
Chr2	stalkie_big_nohaplotig	exon	132545847	132546919	99	+	.	Parent=FBgn0260634.1.mrna1;Target=FBgn0260634.1 2906 3978 +
Chr2	stalkie_big_nohaplotig	exon	132547258	132549702	99	+	.	Parent=FBgn0260634.1.mrna1;Target=FBgn0260634.1 3979 6423 +
Chr2	stalkie_big_nohaplotig	CDS	132529221	132529435	.	+	0	Parent=FBgn0260634.1.mrna1;Target=FBgn0260634.1 1 215 +
Chr2	stalkie_big_nohaplotig	CDS	132541186	132542912	.	+	1	Parent=FBgn0260634.1.mrna1;Target=FBgn0260634.1 216 1942 +
Chr2	stalkie_big_nohaplotig	CDS	132543539	132543838	.	+	2	Parent=FBgn0260634.1.mrna1;Target=FBgn0260634.1 1943 2242 +
Chr2	stalkie_big_nohaplotig	CDS	132543967	132544623	.	+	2	Parent=FBgn0260634.1.mrna1;Target=FBgn0260634.1 2243 2905 +
Chr2	stalkie_big_nohaplotig	CDS	132545847	132546919	.	+	2	Parent=FBgn0260634.1.mrna1;Target=FBgn0260634.1 2906 3978 +
Chr2	stalkie_big_nohaplotig	CDS	132547258	132549702	.	+	0	Parent=FBgn0260634.1.mrna1;Target=FBgn0260634.1 3979 6423 +
Chr2	gffcl	locus	132551936	132552337	.	+	.	ID=RLOC_00021751;geneIDs=comp89709_c0_seq1.path1;transcripts=comp89709_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132551936	132552337	.	+	.	ID=comp89709_c0_seq1.mrna1;geneID=comp89709_c0_seq1.path1;Name=comp89709_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.5;matches=401;mismatches=1;indels=1;unknowns=0;Target=comp89709_c0_seq1 405 3 .;CDS_Target=comp89709_c0_seq1 57 4 .;locus=RLOC_00021751
Chr2	stalkie_big_nohaplotig	exon	132551936	132552337	99	+	.	Parent=comp89709_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	132551937	132551990	.	+	0	Parent=comp89709_c0_seq1.mrna1
Chr2	gffcl	locus	132610440	132613803	.	+	.	ID=RLOC_00021752;geneIDs=comp155446_c0_seq1.path1;transcripts=comp155446_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132610440	132613803	.	+	.	ID=comp155446_c0_seq1.mrna1;geneID=comp155446_c0_seq1.path1;Name=comp155446_c0_seq1;Dir=sensecoverage=98.8;identity=99.2;matches=976;mismatches=3;indels=5;unknowns=0;locus=RLOC_00021752
Chr2	stalkie_big_nohaplotig	exon	132610440	132610546	93	+	.	Parent=comp155446_c0_seq1.mrna1;Target=comp155446_c0_seq1 13 114 +
Chr2	stalkie_big_nohaplotig	exon	132612848	132613371	99	+	.	Parent=comp155446_c0_seq1.mrna1;Target=comp155446_c0_seq1 115 638 +
Chr2	stalkie_big_nohaplotig	exon	132613451	132613803	100	+	.	Parent=comp155446_c0_seq1.mrna1;Target=comp155446_c0_seq1 639 991 +
Chr2	stalkie_big_nohaplotig	CDS	132612875	132613371	.	+	0	Parent=comp155446_c0_seq1.mrna1;Target=comp155446_c0_seq1 142 638 +
Chr2	stalkie_big_nohaplotig	CDS	132613451	132613583	.	+	1	Parent=comp155446_c0_seq1.mrna1;Target=comp155446_c0_seq1 639 771 +
Chr2	gffcl	locus	132644292	132655050	.	-	.	ID=RLOC_00021753;geneIDs=Branchiostoma.path1,FBgn0003567.2.path1;transcripts=FBgn0003567.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132644292	132655050	.	-	.	ID=FBgn0003567.2.mrna1;geneID=FBgn0003567.2.path1;Name=FBgn0003567.2;Dir=sensecoverage=99.7;identity=97.6;matches=1728;mismatches=42;indels=0;unknowns=0;locus=RLOC_00021753
Chr2	stalkie_big_nohaplotig	exon	132644292	132644369	94	-	.	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 1699 1776 +
Chr2	stalkie_big_nohaplotig	exon	132644571	132644654	98	-	.	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 1615 1698 +
Chr2	stalkie_big_nohaplotig	exon	132646033	132646116	100	-	.	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 1531 1614 +
Chr2	stalkie_big_nohaplotig	exon	132646177	132646260	100	-	.	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 1447 1530 +
Chr2	stalkie_big_nohaplotig	exon	132646322	132646405	98	-	.	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 1363 1446 +
Chr2	stalkie_big_nohaplotig	exon	132646473	132646605	99	-	.	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 1230 1362 +
Chr2	stalkie_big_nohaplotig	exon	132646663	132647084	94	-	.	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 808 1229 +
Chr2	stalkie_big_nohaplotig	exon	132653275	132653570	97	-	.	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 512 807 +
Chr2	stalkie_big_nohaplotig	exon	132654373	132654518	98	-	.	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 366 511 +
Chr2	stalkie_big_nohaplotig	exon	132654571	132654761	99	-	.	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 175 365 +
Chr2	stalkie_big_nohaplotig	exon	132654827	132654910	98	-	.	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 91 174 +
Chr2	stalkie_big_nohaplotig	exon	132654967	132655050	100	-	.	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 7 90 +
Chr2	stalkie_big_nohaplotig	CDS	132644292	132644369	.	-	0	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 1699 1776 +
Chr2	stalkie_big_nohaplotig	CDS	132644571	132644654	.	-	0	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 1615 1698 +
Chr2	stalkie_big_nohaplotig	CDS	132646033	132646116	.	-	0	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 1531 1614 +
Chr2	stalkie_big_nohaplotig	CDS	132646177	132646260	.	-	0	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 1447 1530 +
Chr2	stalkie_big_nohaplotig	CDS	132646322	132646405	.	-	0	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 1363 1446 +
Chr2	stalkie_big_nohaplotig	CDS	132646473	132646605	.	-	1	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 1230 1362 +
Chr2	stalkie_big_nohaplotig	CDS	132646663	132647084	.	-	0	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 808 1229 +
Chr2	stalkie_big_nohaplotig	CDS	132653275	132653570	.	-	2	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 512 807 +
Chr2	stalkie_big_nohaplotig	CDS	132654373	132654518	.	-	1	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 366 511 +
Chr2	stalkie_big_nohaplotig	CDS	132654571	132654761	.	-	0	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 175 365 +
Chr2	stalkie_big_nohaplotig	CDS	132654827	132654910	.	-	0	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 91 174 +
Chr2	stalkie_big_nohaplotig	CDS	132654967	132655050	.	-	0	Parent=FBgn0003567.2.mrna1;Target=FBgn0003567.2 7 90 +
Chr2	gffcl	locus	132672013	132674453	.	-	.	ID=RLOC_00021754;geneIDs=FBgn0039486.1.path1;transcripts=FBgn0039486.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132672013	132674453	.	-	.	ID=FBgn0039486.1.mrna1;geneID=FBgn0039486.1.path1;Name=FBgn0039486.1;Dir=sensecoverage=100.0;identity=98.9;matches=935;mismatches=10;indels=0;unknowns=0;locus=RLOC_00021754
Chr2	stalkie_big_nohaplotig	exon	132672013	132672414	98	-	.	Parent=FBgn0039486.1.mrna1;Target=FBgn0039486.1 544 945 +
Chr2	stalkie_big_nohaplotig	exon	132672470	132672847	98	-	.	Parent=FBgn0039486.1.mrna1;Target=FBgn0039486.1 166 543 +
Chr2	stalkie_big_nohaplotig	exon	132674210	132674307	98	-	.	Parent=FBgn0039486.1.mrna1;Target=FBgn0039486.1 68 165 +
Chr2	stalkie_big_nohaplotig	exon	132674387	132674453	100	-	.	Parent=FBgn0039486.1.mrna1;Target=FBgn0039486.1 1 67 +
Chr2	stalkie_big_nohaplotig	CDS	132672013	132672414	.	-	0	Parent=FBgn0039486.1.mrna1;Target=FBgn0039486.1 544 945 +
Chr2	stalkie_big_nohaplotig	CDS	132672470	132672847	.	-	0	Parent=FBgn0039486.1.mrna1;Target=FBgn0039486.1 166 543 +
Chr2	stalkie_big_nohaplotig	CDS	132674210	132674307	.	-	2	Parent=FBgn0039486.1.mrna1;Target=FBgn0039486.1 68 165 +
Chr2	stalkie_big_nohaplotig	CDS	132674387	132674453	.	-	0	Parent=FBgn0039486.1.mrna1;Target=FBgn0039486.1 1 67 +
Chr2	gffcl	locus	132678459	132679238	.	-	.	ID=RLOC_00021755;geneIDs=FBgn0033706.1.path1;transcripts=FBgn0033706.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132678459	132679238	.	-	.	ID=FBgn0033706.1.mrna1;geneID=FBgn0033706.1.path1;Name=FBgn0033706.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=779;mismatches=1;indels=0;unknowns=0;Target=FBgn0033706.1 780 1 .;locus=RLOC_00021755
Chr2	stalkie_big_nohaplotig	exon	132678459	132679238	99	-	.	Parent=FBgn0033706.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	132678459	132679238	.	-	0	Parent=FBgn0033706.1.mrna1
Chr2	gffcl	locus	132712697	132715820	.	+	.	ID=RLOC_00021756;geneIDs=comp116401_c0_seq1.path1;transcripts=comp116401_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132712697	132715820	.	+	.	ID=comp116401_c0_seq1.mrna1;geneID=comp116401_c0_seq1.path1;Name=comp116401_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=349;mismatches=0;indels=0;unknowns=0;Target=comp116401_c0_seq1 244 348 .;locus=RLOC_00021756
Chr2	stalkie_big_nohaplotig	exon	132712697	132712884	100	+	.	Parent=comp116401_c0_seq1.mrna1;Target=comp116401_c0_seq1 162 349 -
Chr2	stalkie_big_nohaplotig	exon	132715660	132715820	100	+	.	Parent=comp116401_c0_seq1.mrna1;Target=comp116401_c0_seq1 1 161 -
Chr2	stalkie_big_nohaplotig	CDS	132712698	132712802	.	+	0	Parent=comp116401_c0_seq1.mrna1
Chr2	gffcl	locus	132757930	132758208	.	+	.	ID=RLOC_00021757;geneIDs=comp46245_c0_seq1.path2;transcripts=comp46245_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	132757930	132758208	.	+	.	ID=comp46245_c0_seq1.mrna2;geneID=comp46245_c0_seq1.path2;Name=comp46245_c0_seq1;Dir=indeterminatecoverage=72.2;identity=99.3;matches=279;mismatches=0;indels=2;unknowns=0;Target=comp46245_c0_seq1 382 102 .;CDS_Target=comp46245_c0_seq1 113 102 .;locus=RLOC_00021757
Chr2	stalkie_big_nohaplotig	exon	132757930	132758208	99	+	.	Parent=comp46245_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	132757930	132757941	.	+	0	Parent=comp46245_c0_seq1.mrna2
Chr2	gffcl	locus	132758486	132758981	.	-	.	ID=RLOC_00021758;geneIDs=comp135993_c0_seq1.path1;transcripts=comp135993_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132758486	132758981	.	-	.	ID=comp135993_c0_seq1.mrna1;geneID=comp135993_c0_seq1.path1;Name=comp135993_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.4;matches=493;mismatches=3;indels=0;unknowns=0;Target=comp135993_c0_seq1 496 1 .;CDS_Target=comp135993_c0_seq1 51 1 .;locus=RLOC_00021758
Chr2	stalkie_big_nohaplotig	exon	132758486	132758981	99	-	.	Parent=comp135993_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	132758931	132758981	.	-	0	Parent=comp135993_c0_seq1.mrna1
Chr2	gffcl	locus	132759626	133153270	.	-	.	ID=RLOC_00021759;geneIDs=FBgn0037676.1.path1;transcripts=FBgn0037676.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132759626	133153270	.	-	.	ID=FBgn0037676.1.mrna1;geneID=FBgn0037676.1.path1;Name=FBgn0037676.1;Dir=sensecoverage=100.0;identity=100.0;matches=564;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021759
Chr2	stalkie_big_nohaplotig	exon	132759626	132759774	100	-	.	Parent=FBgn0037676.1.mrna1;Target=FBgn0037676.1 416 564 +
Chr2	stalkie_big_nohaplotig	exon	132761689	132761746	100	-	.	Parent=FBgn0037676.1.mrna1;Target=FBgn0037676.1 358 415 +
Chr2	stalkie_big_nohaplotig	exon	133152914	133153270	100	-	.	Parent=FBgn0037676.1.mrna1;Target=FBgn0037676.1 1 357 +
Chr2	stalkie_big_nohaplotig	CDS	132759626	132759774	.	-	2	Parent=FBgn0037676.1.mrna1;Target=FBgn0037676.1 416 564 +
Chr2	stalkie_big_nohaplotig	CDS	132761689	132761746	.	-	0	Parent=FBgn0037676.1.mrna1;Target=FBgn0037676.1 358 415 +
Chr2	stalkie_big_nohaplotig	CDS	133152914	133153270	.	-	0	Parent=FBgn0037676.1.mrna1;Target=FBgn0037676.1 1 357 +
Chr2	gffcl	locus	132765926	132767865	.	+	.	ID=RLOC_00021760;geneIDs=FBgn0038845.1.path1;transcripts=FBgn0038845.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132765926	132767865	.	+	.	ID=FBgn0038845.1.mrna1;geneID=FBgn0038845.1.path1;Name=FBgn0038845.1;Dir=sensecoverage=100.0;identity=99.3;matches=1609;mismatches=11;indels=0;unknowns=0;locus=RLOC_00021760
Chr2	stalkie_big_nohaplotig	exon	132765926	132767203	99	+	.	Parent=FBgn0038845.1.mrna1;Target=FBgn0038845.1 1 1278 +
Chr2	stalkie_big_nohaplotig	exon	132767524	132767865	99	+	.	Parent=FBgn0038845.1.mrna1;Target=FBgn0038845.1 1279 1620 +
Chr2	stalkie_big_nohaplotig	CDS	132765926	132767203	.	+	0	Parent=FBgn0038845.1.mrna1;Target=FBgn0038845.1 1 1278 +
Chr2	stalkie_big_nohaplotig	CDS	132767524	132767865	.	+	0	Parent=FBgn0038845.1.mrna1;Target=FBgn0038845.1 1279 1620 +
Chr2	gffcl	locus	132814341	132814728	.	+	.	ID=RLOC_00021761;geneIDs=comp89709_c0_seq1.path2;transcripts=comp89709_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	132814341	132814728	.	+	.	ID=comp89709_c0_seq1.mrna2;geneID=comp89709_c0_seq1.path2;Name=comp89709_c0_seq1;Dir=indeterminatecoverage=95.8;identity=99.7;matches=387;mismatches=1;indels=0;unknowns=0;Target=comp89709_c0_seq1 405 18 .;CDS_Target=comp89709_c0_seq1 384 343 .;locus=RLOC_00021761
Chr2	stalkie_big_nohaplotig	exon	132814341	132814728	99	+	.	Parent=comp89709_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	132814666	132814707	.	+	0	Parent=comp89709_c0_seq1.mrna2
Chr2	gffcl	locus	132815688	132836566	.	+	.	ID=RLOC_00021762;geneIDs=FBgn0053111.1.path1;transcripts=FBgn0053111.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132815688	132836566	.	+	.	ID=FBgn0053111.1.mrna1;geneID=FBgn0053111.1.path1;Name=FBgn0053111.1;Dir=sensecoverage=100.0;identity=99.9;matches=1568;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021762
Chr2	stalkie_big_nohaplotig	exon	132815688	132815883	100	+	.	Parent=FBgn0053111.1.mrna1;Target=FBgn0053111.1 1 196 +
Chr2	stalkie_big_nohaplotig	exon	132815943	132816129	100	+	.	Parent=FBgn0053111.1.mrna1;Target=FBgn0053111.1 197 383 +
Chr2	stalkie_big_nohaplotig	exon	132817239	132817524	99	+	.	Parent=FBgn0053111.1.mrna1;Target=FBgn0053111.1 384 669 +
Chr2	stalkie_big_nohaplotig	exon	132817591	132817703	100	+	.	Parent=FBgn0053111.1.mrna1;Target=FBgn0053111.1 670 782 +
Chr2	stalkie_big_nohaplotig	exon	132817770	132817959	100	+	.	Parent=FBgn0053111.1.mrna1;Target=FBgn0053111.1 783 972 +
Chr2	stalkie_big_nohaplotig	exon	132819987	132820422	100	+	.	Parent=FBgn0053111.1.mrna1;Target=FBgn0053111.1 973 1408 +
Chr2	stalkie_big_nohaplotig	exon	132836406	132836566	100	+	.	Parent=FBgn0053111.1.mrna1;Target=FBgn0053111.1 1409 1569 +
Chr2	stalkie_big_nohaplotig	CDS	132815688	132815883	.	+	0	Parent=FBgn0053111.1.mrna1;Target=FBgn0053111.1 1 196 +
Chr2	stalkie_big_nohaplotig	CDS	132815943	132816129	.	+	2	Parent=FBgn0053111.1.mrna1;Target=FBgn0053111.1 197 383 +
Chr2	stalkie_big_nohaplotig	CDS	132817239	132817524	.	+	1	Parent=FBgn0053111.1.mrna1;Target=FBgn0053111.1 384 669 +
Chr2	stalkie_big_nohaplotig	CDS	132817591	132817703	.	+	0	Parent=FBgn0053111.1.mrna1;Target=FBgn0053111.1 670 782 +
Chr2	stalkie_big_nohaplotig	CDS	132817770	132817959	.	+	1	Parent=FBgn0053111.1.mrna1;Target=FBgn0053111.1 783 972 +
Chr2	stalkie_big_nohaplotig	CDS	132819987	132820422	.	+	0	Parent=FBgn0053111.1.mrna1;Target=FBgn0053111.1 973 1408 +
Chr2	stalkie_big_nohaplotig	CDS	132836406	132836566	.	+	2	Parent=FBgn0053111.1.mrna1;Target=FBgn0053111.1 1409 1569 +
Chr2	gffcl	locus	132839421	132839840	.	-	.	ID=RLOC_00021763;geneIDs=comp151313_c0_seq1.path1;transcripts=comp151313_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132839421	132839840	.	-	.	ID=comp151313_c0_seq1.mrna1;geneID=comp151313_c0_seq1.path1;Name=comp151313_c0_seq1;Dir=indeterminatecoverage=90.5;identity=98.3;matches=413;mismatches=6;indels=1;unknowns=0;Target=comp151313_c0_seq1 432 14 .;CDS_Target=comp151313_c0_seq1 431 315 .;locus=RLOC_00021763
Chr2	stalkie_big_nohaplotig	exon	132839421	132839840	98	-	.	Parent=comp151313_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	132839422	132839538	.	-	0	Parent=comp151313_c0_seq1.mrna1
Chr2	gffcl	locus	132840477	132902185	.	-	.	ID=RLOC_00021764;geneIDs=FBgn0015513.1.path1;transcripts=FBgn0015513.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132840477	132902185	.	-	.	ID=FBgn0015513.1.mrna1;geneID=FBgn0015513.1.path1;Name=FBgn0015513.1;Dir=sensecoverage=100.0;identity=98.1;matches=5839;mismatches=95;indels=21;unknowns=46;Target=FBgn0015513.1 414 476 +;locus=RLOC_00021764
Chr2	stalkie_big_nohaplotig	exon	132840477	132840760	99	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 5717 6000 +
Chr2	stalkie_big_nohaplotig	exon	132841894	132842050	99	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 5560 5716 +
Chr2	stalkie_big_nohaplotig	exon	132842113	132842280	99	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 5392 5559 +
Chr2	stalkie_big_nohaplotig	exon	132842352	132842430	100	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 5313 5391 +
Chr2	stalkie_big_nohaplotig	exon	132842938	132843024	100	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 5226 5312 +
Chr2	stalkie_big_nohaplotig	exon	132843089	132843204	99	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 5110 5225 +
Chr2	stalkie_big_nohaplotig	exon	132843298	132843410	100	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 4997 5109 +
Chr2	stalkie_big_nohaplotig	exon	132843473	132843746	100	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 4723 4996 +
Chr2	stalkie_big_nohaplotig	exon	132843827	132844875	100	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 3674 4722 +
Chr2	stalkie_big_nohaplotig	exon	132844939	132845779	99	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 2833 3673 +
Chr2	stalkie_big_nohaplotig	exon	132849698	132849811	100	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 2719 2832 +
Chr2	stalkie_big_nohaplotig	exon	132854890	132855064	97	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 2544 2718 +
Chr2	stalkie_big_nohaplotig	exon	132855131	132855260	100	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 2414 2543 +
Chr2	stalkie_big_nohaplotig	exon	132856381	132856601	100	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 2193 2413 +
Chr2	stalkie_big_nohaplotig	exon	132856674	132856825	100	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 2041 2192 +
Chr2	stalkie_big_nohaplotig	exon	132856890	132857026	99	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 1904 2040 +
Chr2	stalkie_big_nohaplotig	exon	132857103	132857301	100	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 1705 1903 +
Chr2	stalkie_big_nohaplotig	exon	132858010	132858156	100	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 1558 1704 +
Chr2	stalkie_big_nohaplotig	exon	132858216	132859160	99	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 613 1557 +
Chr2	stalkie_big_nohaplotig	exon	132859241	132859314	100	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 539 612 +
Chr2	stalkie_big_nohaplotig	exon	132860268	132860273	100	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 533 538 +
Chr2	stalkie_big_nohaplotig	exon	132860345	132860503	47	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 356 532 +
Chr2	stalkie_big_nohaplotig	exon	132862313	132862481	97	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 186 355 +
Chr2	stalkie_big_nohaplotig	exon	132867920	132868031	98	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 74 185 +
Chr2	stalkie_big_nohaplotig	exon	132902113	132902185	100	-	.	Parent=FBgn0015513.1.mrna1;Target=FBgn0015513.1 1 73 +
Chr2	stalkie_big_nohaplotig	CDS	132860397	132860447	.	-	0	Parent=FBgn0015513.1.mrna1
Chr2	gffcl	locus	132869505	132962744	.	+	.	ID=RLOC_00021765;geneIDs=FBgn0051005.1.path2;transcripts=FBgn0051005.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	132869505	132962744	.	+	.	ID=FBgn0051005.1.mrna2;geneID=FBgn0051005.1.path2;Name=FBgn0051005.1;Dir=sensecoverage=80.0;identity=97.5;matches=1004;mismatches=19;indels=7;unknowns=0;locus=RLOC_00021765
Chr2	stalkie_big_nohaplotig	exon	132869505	132869506	100	+	.	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 271 272 +
Chr2	stalkie_big_nohaplotig	exon	132874744	132874745	100	+	.	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 273 274 +
Chr2	stalkie_big_nohaplotig	exon	132879856	132879865	80	+	.	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 275 284 +
Chr2	stalkie_big_nohaplotig	exon	132883548	132883552	100	+	.	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 285 289 +
Chr2	stalkie_big_nohaplotig	exon	132889866	132889870	100	+	.	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 290 294 +
Chr2	stalkie_big_nohaplotig	exon	132890092	132890097	100	+	.	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 295 300 +
Chr2	stalkie_big_nohaplotig	exon	132892114	132892120	100	+	.	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 301 307 +
Chr2	stalkie_big_nohaplotig	exon	132892141	132892142	100	+	.	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 362 363 +
Chr2	stalkie_big_nohaplotig	exon	132928159	132928171	76	+	.	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 364 376 +
Chr2	stalkie_big_nohaplotig	exon	132934929	132934942	92	+	.	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 377 390 +
Chr2	stalkie_big_nohaplotig	exon	132937576	132937582	100	+	.	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 391 397 +
Chr2	stalkie_big_nohaplotig	exon	132939648	132939658	72	+	.	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 398 408 +
Chr2	stalkie_big_nohaplotig	exon	132941755	132941922	90	+	.	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 409 569 +
Chr2	stalkie_big_nohaplotig	exon	132942488	132942629	100	+	.	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 570 711 +
Chr2	stalkie_big_nohaplotig	exon	132944654	132944743	98	+	.	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 712 801 +
Chr2	stalkie_big_nohaplotig	exon	132957992	132958123	100	+	.	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 802 933 +
Chr2	stalkie_big_nohaplotig	exon	132958274	132958468	100	+	.	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 934 1128 +
Chr2	stalkie_big_nohaplotig	exon	132962526	132962744	100	+	.	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 1129 1347 +
Chr2	stalkie_big_nohaplotig	CDS	132941867	132941922	.	+	0	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 514 569 +
Chr2	stalkie_big_nohaplotig	CDS	132942488	132942629	.	+	1	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 570 711 +
Chr2	stalkie_big_nohaplotig	CDS	132944654	132944743	.	+	0	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 712 801 +
Chr2	stalkie_big_nohaplotig	CDS	132957992	132958123	.	+	0	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 802 933 +
Chr2	stalkie_big_nohaplotig	CDS	132958274	132958468	.	+	0	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 934 1128 +
Chr2	stalkie_big_nohaplotig	CDS	132962526	132962744	.	+	0	Parent=FBgn0051005.1.mrna2;Target=FBgn0051005.1 1129 1347 +
Chr2	gffcl	locus	132904901	132905935	.	-	.	ID=RLOC_00021766;geneIDs=FBgn0025457.1.path1;transcripts=FBgn0025457.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132904901	132905935	.	-	.	ID=FBgn0025457.1.mrna1;geneID=FBgn0025457.1.path1;Name=FBgn0025457.1;Dir=sensecoverage=100.0;identity=100.0;matches=984;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021766
Chr2	stalkie_big_nohaplotig	exon	132904901	132905686	100	-	.	Parent=FBgn0025457.1.mrna1;Target=FBgn0025457.1 199 984 +
Chr2	stalkie_big_nohaplotig	exon	132905738	132905935	100	-	.	Parent=FBgn0025457.1.mrna1;Target=FBgn0025457.1 1 198 +
Chr2	stalkie_big_nohaplotig	CDS	132904901	132905686	.	-	0	Parent=FBgn0025457.1.mrna1;Target=FBgn0025457.1 199 984 +
Chr2	stalkie_big_nohaplotig	CDS	132905738	132905935	.	-	0	Parent=FBgn0025457.1.mrna1;Target=FBgn0025457.1 1 198 +
Chr2	gffcl	locus	132906660	132908050	.	-	.	ID=RLOC_00021767;geneIDs=FBgn0036266.1.path1;transcripts=FBgn0036266.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132906660	132908050	.	-	.	ID=FBgn0036266.1.mrna1;geneID=FBgn0036266.1.path1;Name=FBgn0036266.1;Dir=sensecoverage=100.0;identity=99.9;matches=1163;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021767
Chr2	stalkie_big_nohaplotig	exon	132906660	132907451	99	-	.	Parent=FBgn0036266.1.mrna1;Target=FBgn0036266.1 373 1164 +
Chr2	stalkie_big_nohaplotig	exon	132907510	132907694	100	-	.	Parent=FBgn0036266.1.mrna1;Target=FBgn0036266.1 188 372 +
Chr2	stalkie_big_nohaplotig	exon	132907808	132907929	100	-	.	Parent=FBgn0036266.1.mrna1;Target=FBgn0036266.1 66 187 +
Chr2	stalkie_big_nohaplotig	exon	132907986	132908050	100	-	.	Parent=FBgn0036266.1.mrna1;Target=FBgn0036266.1 1 65 +
Chr2	stalkie_big_nohaplotig	CDS	132906660	132907451	.	-	0	Parent=FBgn0036266.1.mrna1;Target=FBgn0036266.1 373 1164 +
Chr2	stalkie_big_nohaplotig	CDS	132907510	132907694	.	-	2	Parent=FBgn0036266.1.mrna1;Target=FBgn0036266.1 188 372 +
Chr2	stalkie_big_nohaplotig	CDS	132907808	132907929	.	-	1	Parent=FBgn0036266.1.mrna1;Target=FBgn0036266.1 66 187 +
Chr2	stalkie_big_nohaplotig	CDS	132907986	132908050	.	-	0	Parent=FBgn0036266.1.mrna1;Target=FBgn0036266.1 1 65 +
Chr2	gffcl	locus	132909780	132922831	.	+	.	ID=RLOC_00021768;geneIDs=FBgn0003268.1.path1;transcripts=FBgn0003268.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132909780	132922831	.	+	.	ID=FBgn0003268.1.mrna1;geneID=FBgn0003268.1.path1;Name=FBgn0003268.1;Dir=sensecoverage=100.0;identity=99.5;matches=6169;mismatches=29;indels=0;unknowns=0;locus=RLOC_00021768
Chr2	stalkie_big_nohaplotig	exon	132909780	132909896	100	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 1 117 +
Chr2	stalkie_big_nohaplotig	exon	132909956	132910293	98	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 118 455 +
Chr2	stalkie_big_nohaplotig	exon	132910355	132910672	99	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 456 773 +
Chr2	stalkie_big_nohaplotig	exon	132910730	132910929	98	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 774 973 +
Chr2	stalkie_big_nohaplotig	exon	132910998	132911206	99	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 974 1182 +
Chr2	stalkie_big_nohaplotig	exon	132911788	132911874	100	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 1183 1269 +
Chr2	stalkie_big_nohaplotig	exon	132911929	132912090	98	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 1270 1431 +
Chr2	stalkie_big_nohaplotig	exon	132912147	132912604	100	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 1432 1889 +
Chr2	stalkie_big_nohaplotig	exon	132912665	132912788	100	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 1890 2013 +
Chr2	stalkie_big_nohaplotig	exon	132913969	132914223	100	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 2014 2268 +
Chr2	stalkie_big_nohaplotig	exon	132914288	132914674	100	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 2269 2655 +
Chr2	stalkie_big_nohaplotig	exon	132914740	132915232	97	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 2656 3148 +
Chr2	stalkie_big_nohaplotig	exon	132916326	132916684	100	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 3149 3507 +
Chr2	stalkie_big_nohaplotig	exon	132916764	132917103	100	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 3508 3847 +
Chr2	stalkie_big_nohaplotig	exon	132917173	132917335	100	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 3848 4010 +
Chr2	stalkie_big_nohaplotig	exon	132917409	132917598	100	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 4011 4200 +
Chr2	stalkie_big_nohaplotig	exon	132918976	132919155	100	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 4201 4380 +
Chr2	stalkie_big_nohaplotig	exon	132919213	132919477	100	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 4381 4645 +
Chr2	stalkie_big_nohaplotig	exon	132919568	132919770	100	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 4646 4848 +
Chr2	stalkie_big_nohaplotig	exon	132919991	132920523	100	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 4849 5381 +
Chr2	stalkie_big_nohaplotig	exon	132921817	132921894	100	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 5382 5459 +
Chr2	stalkie_big_nohaplotig	exon	132921964	132922462	100	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 5460 5958 +
Chr2	stalkie_big_nohaplotig	exon	132922533	132922664	100	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 5959 6090 +
Chr2	stalkie_big_nohaplotig	exon	132922724	132922831	96	+	.	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 6091 6198 +
Chr2	stalkie_big_nohaplotig	CDS	132909780	132909896	.	+	0	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 1 117 +
Chr2	stalkie_big_nohaplotig	CDS	132909956	132910293	.	+	0	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 118 455 +
Chr2	stalkie_big_nohaplotig	CDS	132910355	132910672	.	+	1	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 456 773 +
Chr2	stalkie_big_nohaplotig	CDS	132910730	132910929	.	+	1	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 774 973 +
Chr2	stalkie_big_nohaplotig	CDS	132910998	132911206	.	+	2	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 974 1182 +
Chr2	stalkie_big_nohaplotig	CDS	132911788	132911874	.	+	0	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 1183 1269 +
Chr2	stalkie_big_nohaplotig	CDS	132911929	132912090	.	+	0	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 1270 1431 +
Chr2	stalkie_big_nohaplotig	CDS	132912147	132912604	.	+	0	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 1432 1889 +
Chr2	stalkie_big_nohaplotig	CDS	132912665	132912788	.	+	1	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 1890 2013 +
Chr2	stalkie_big_nohaplotig	CDS	132913969	132914223	.	+	0	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 2014 2268 +
Chr2	stalkie_big_nohaplotig	CDS	132914288	132914674	.	+	0	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 2269 2655 +
Chr2	stalkie_big_nohaplotig	CDS	132914740	132915232	.	+	0	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 2656 3148 +
Chr2	stalkie_big_nohaplotig	CDS	132916326	132916684	.	+	2	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 3149 3507 +
Chr2	stalkie_big_nohaplotig	CDS	132916764	132917103	.	+	0	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 3508 3847 +
Chr2	stalkie_big_nohaplotig	CDS	132917173	132917335	.	+	2	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 3848 4010 +
Chr2	stalkie_big_nohaplotig	CDS	132917409	132917598	.	+	1	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 4011 4200 +
Chr2	stalkie_big_nohaplotig	CDS	132918976	132919155	.	+	0	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 4201 4380 +
Chr2	stalkie_big_nohaplotig	CDS	132919213	132919477	.	+	0	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 4381 4645 +
Chr2	stalkie_big_nohaplotig	CDS	132919568	132919770	.	+	2	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 4646 4848 +
Chr2	stalkie_big_nohaplotig	CDS	132919991	132920523	.	+	0	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 4849 5381 +
Chr2	stalkie_big_nohaplotig	CDS	132921817	132921894	.	+	1	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 5382 5459 +
Chr2	stalkie_big_nohaplotig	CDS	132921964	132922462	.	+	1	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 5460 5958 +
Chr2	stalkie_big_nohaplotig	CDS	132922533	132922664	.	+	0	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 5959 6090 +
Chr2	stalkie_big_nohaplotig	CDS	132922724	132922831	.	+	0	Parent=FBgn0003268.1.mrna1;Target=FBgn0003268.1 6091 6198 +
Chr2	gffcl	locus	132924855	132926034	.	+	.	ID=RLOC_00021769;geneIDs=FBgn0039876.1.path1;transcripts=FBgn0039876.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132924855	132926034	.	+	.	ID=FBgn0039876.1.mrna1;geneID=FBgn0039876.1.path1;Name=FBgn0039876.1;Dir=sensecoverage=100.0;identity=99.9;matches=929;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021769
Chr2	stalkie_big_nohaplotig	exon	132924855	132925120	100	+	.	Parent=FBgn0039876.1.mrna1;Target=FBgn0039876.1 1 266 +
Chr2	stalkie_big_nohaplotig	exon	132925179	132925391	100	+	.	Parent=FBgn0039876.1.mrna1;Target=FBgn0039876.1 267 479 +
Chr2	stalkie_big_nohaplotig	exon	132925462	132925628	99	+	.	Parent=FBgn0039876.1.mrna1;Target=FBgn0039876.1 480 646 +
Chr2	stalkie_big_nohaplotig	exon	132925684	132925815	100	+	.	Parent=FBgn0039876.1.mrna1;Target=FBgn0039876.1 647 778 +
Chr2	stalkie_big_nohaplotig	exon	132925883	132926034	100	+	.	Parent=FBgn0039876.1.mrna1;Target=FBgn0039876.1 779 930 +
Chr2	stalkie_big_nohaplotig	CDS	132924855	132925120	.	+	0	Parent=FBgn0039876.1.mrna1;Target=FBgn0039876.1 1 266 +
Chr2	stalkie_big_nohaplotig	CDS	132925179	132925391	.	+	1	Parent=FBgn0039876.1.mrna1;Target=FBgn0039876.1 267 479 +
Chr2	stalkie_big_nohaplotig	CDS	132925462	132925628	.	+	1	Parent=FBgn0039876.1.mrna1;Target=FBgn0039876.1 480 646 +
Chr2	stalkie_big_nohaplotig	CDS	132925684	132925815	.	+	2	Parent=FBgn0039876.1.mrna1;Target=FBgn0039876.1 647 778 +
Chr2	stalkie_big_nohaplotig	CDS	132925883	132926034	.	+	2	Parent=FBgn0039876.1.mrna1;Target=FBgn0039876.1 779 930 +
Chr2	gffcl	locus	132928204	132936013	.	+	.	ID=RLOC_00021770;geneIDs=FBgn0039120.1.path1;transcripts=FBgn0039120.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	132928204	132936013	.	+	.	ID=FBgn0039120.1.mrna1;geneID=FBgn0039120.1.path1;Name=FBgn0039120.1;Dir=sensecoverage=100.0;identity=99.8;matches=5798;mismatches=10;indels=0;unknowns=0;locus=RLOC_00021770
Chr2	stalkie_big_nohaplotig	exon	132928204	132928495	100	+	.	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 1 292 +
Chr2	stalkie_big_nohaplotig	exon	132928596	132929630	99	+	.	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 293 1327 +
Chr2	stalkie_big_nohaplotig	exon	132929690	132930926	100	+	.	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 1328 2564 +
Chr2	stalkie_big_nohaplotig	exon	132930988	132931142	100	+	.	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 2565 2719 +
Chr2	stalkie_big_nohaplotig	exon	132931199	132931593	100	+	.	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 2720 3114 +
Chr2	stalkie_big_nohaplotig	exon	132931657	132931765	100	+	.	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 3115 3223 +
Chr2	stalkie_big_nohaplotig	exon	132931830	132932000	100	+	.	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 3224 3394 +
Chr2	stalkie_big_nohaplotig	exon	132933207	132933451	100	+	.	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 3395 3639 +
Chr2	stalkie_big_nohaplotig	exon	132933509	132933773	100	+	.	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 3640 3904 +
Chr2	stalkie_big_nohaplotig	exon	132933834	132934588	100	+	.	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 3905 4659 +
Chr2	stalkie_big_nohaplotig	exon	132934647	132934912	100	+	.	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 4660 4925 +
Chr2	stalkie_big_nohaplotig	exon	132934993	132935402	100	+	.	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 4926 5335 +
Chr2	stalkie_big_nohaplotig	exon	132935478	132935605	100	+	.	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 5336 5463 +
Chr2	stalkie_big_nohaplotig	exon	132935669	132936013	99	+	.	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 5464 5808 +
Chr2	stalkie_big_nohaplotig	CDS	132928204	132928495	.	+	0	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 1 292 +
Chr2	stalkie_big_nohaplotig	CDS	132928596	132929630	.	+	2	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 293 1327 +
Chr2	stalkie_big_nohaplotig	CDS	132929690	132930926	.	+	2	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 1328 2564 +
Chr2	stalkie_big_nohaplotig	CDS	132930988	132931142	.	+	1	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 2565 2719 +
Chr2	stalkie_big_nohaplotig	CDS	132931199	132931593	.	+	2	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 2720 3114 +
Chr2	stalkie_big_nohaplotig	CDS	132931657	132931765	.	+	0	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 3115 3223 +
Chr2	stalkie_big_nohaplotig	CDS	132931830	132932000	.	+	2	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 3224 3394 +
Chr2	stalkie_big_nohaplotig	CDS	132933207	132933451	.	+	2	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 3395 3639 +
Chr2	stalkie_big_nohaplotig	CDS	132933509	132933773	.	+	0	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 3640 3904 +
Chr2	stalkie_big_nohaplotig	CDS	132933834	132934588	.	+	2	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 3905 4659 +
Chr2	stalkie_big_nohaplotig	CDS	132934647	132934912	.	+	0	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 4660 4925 +
Chr2	stalkie_big_nohaplotig	CDS	132934993	132935402	.	+	1	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 4926 5335 +
Chr2	stalkie_big_nohaplotig	CDS	132935478	132935605	.	+	2	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 5336 5463 +
Chr2	stalkie_big_nohaplotig	CDS	132935669	132936013	.	+	0	Parent=FBgn0039120.1.mrna1;Target=FBgn0039120.1 5464 5808 +
Chr2	gffcl	locus	133028862	133029899	.	+	.	ID=RLOC_00021771;geneIDs=comp149265_c0_seq1.path1;transcripts=comp149265_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133028862	133029899	.	+	.	ID=comp149265_c0_seq1.mrna1;geneID=comp149265_c0_seq1.path1;Name=comp149265_c0_seq1;Dir=indeterminatecoverage=96.5;identity=99.3;matches=1033;mismatches=5;indels=2;unknowns=0;Target=comp149265_c0_seq1 1078 39 .;CDS_Target=comp149265_c0_seq1 722 555 .;locus=RLOC_00021771
Chr2	stalkie_big_nohaplotig	exon	133028862	133029899	99	+	.	Parent=comp149265_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	133029376	133029543	.	+	0	Parent=comp149265_c0_seq1.mrna1
Chr2	gffcl	locus	133039964	133040233	.	-	.	ID=RLOC_00021772;geneIDs=FBgn0051005.1.path1;transcripts=FBgn0051005.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133039964	133040233	.	-	.	ID=FBgn0051005.1.mrna1;geneID=FBgn0051005.1.path1;Name=FBgn0051005.1;Dir=indeterminatecoverage=20.0;identity=100.0;matches=270;mismatches=0;indels=0;unknowns=0;Target=FBgn0051005.1 270 1 .;locus=RLOC_00021772
Chr2	stalkie_big_nohaplotig	exon	133039964	133040233	100	-	.	Parent=FBgn0051005.1.mrna1
Chr2	gffcl	locus	133041463	133042094	.	+	.	ID=RLOC_00021773;geneIDs=FBgn0039835.1.path1;transcripts=FBgn0039835.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133041463	133042094	.	+	.	ID=FBgn0039835.1.mrna1;geneID=FBgn0039835.1.path1;Name=FBgn0039835.1;Dir=sensecoverage=100.0;identity=99.8;matches=509;mismatches=0;indels=1;unknowns=0;locus=RLOC_00021773
Chr2	stalkie_big_nohaplotig	exon	133041463	133041580	100	+	.	Parent=FBgn0039835.1.mrna1;Target=FBgn0039835.1 1 118 +
Chr2	stalkie_big_nohaplotig	exon	133041643	133041903	100	+	.	Parent=FBgn0039835.1.mrna1;Target=FBgn0039835.1 119 379 +
Chr2	stalkie_big_nohaplotig	exon	133041965	133042094	99	+	.	Parent=FBgn0039835.1.mrna1;Target=FBgn0039835.1 380 510 +
Chr2	stalkie_big_nohaplotig	CDS	133041463	133041580	.	+	0	Parent=FBgn0039835.1.mrna1;Target=FBgn0039835.1 1 118 +
Chr2	stalkie_big_nohaplotig	CDS	133041643	133041903	.	+	2	Parent=FBgn0039835.1.mrna1;Target=FBgn0039835.1 119 379 +
Chr2	stalkie_big_nohaplotig	CDS	133041965	133042094	.	+	2	Parent=FBgn0039835.1.mrna1;Target=FBgn0039835.1 380 510 +
Chr2	gffcl	locus	133042337	133043246	.	-	.	ID=RLOC_00021774;geneIDs=FBgn0039836.1.path1;transcripts=FBgn0039836.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133042337	133043246	.	-	.	ID=FBgn0039836.1.mrna1;geneID=FBgn0039836.1.path1;Name=FBgn0039836.1;Dir=sensecoverage=100.0;identity=99.1;matches=633;mismatches=5;indels=1;unknowns=0;locus=RLOC_00021774
Chr2	stalkie_big_nohaplotig	exon	133042337	133042652	98	-	.	Parent=FBgn0039836.1.mrna1;Target=FBgn0039836.1 323 639 +
Chr2	stalkie_big_nohaplotig	exon	133042810	133042972	100	-	.	Parent=FBgn0039836.1.mrna1;Target=FBgn0039836.1 160 322 +
Chr2	stalkie_big_nohaplotig	exon	133043026	133043164	100	-	.	Parent=FBgn0039836.1.mrna1;Target=FBgn0039836.1 21 159 +
Chr2	stalkie_big_nohaplotig	exon	133043227	133043246	100	-	.	Parent=FBgn0039836.1.mrna1;Target=FBgn0039836.1 1 20 +
Chr2	stalkie_big_nohaplotig	CDS	133042337	133042652	.	-	2	Parent=FBgn0039836.1.mrna1;Target=FBgn0039836.1 323 639 +
Chr2	stalkie_big_nohaplotig	CDS	133042810	133042972	.	-	0	Parent=FBgn0039836.1.mrna1;Target=FBgn0039836.1 160 322 +
Chr2	stalkie_big_nohaplotig	CDS	133043026	133043164	.	-	1	Parent=FBgn0039836.1.mrna1;Target=FBgn0039836.1 21 159 +
Chr2	stalkie_big_nohaplotig	CDS	133043227	133043246	.	-	0	Parent=FBgn0039836.1.mrna1;Target=FBgn0039836.1 1 20 +
Chr2	gffcl	locus	133044349	133045395	.	+	.	ID=RLOC_00021775;geneIDs=FBgn0086362.1.path1;transcripts=FBgn0086362.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133044349	133045395	.	+	.	ID=FBgn0086362.1.mrna1;geneID=FBgn0086362.1.path1;Name=FBgn0086362.1;Dir=sensecoverage=100.0;identity=99.8;matches=934;mismatches=1;indels=1;unknowns=0;Target=FBgn0086362.1 3 59 +;locus=RLOC_00021775
Chr2	stalkie_big_nohaplotig	exon	133044349	133044888	99	+	.	Parent=FBgn0086362.1.mrna1;Target=FBgn0086362.1 1 541 +
Chr2	stalkie_big_nohaplotig	exon	133045001	133045395	99	+	.	Parent=FBgn0086362.1.mrna1;Target=FBgn0086362.1 542 936 +
Chr2	stalkie_big_nohaplotig	CDS	133044351	133044406	.	+	0	Parent=FBgn0086362.1.mrna1
Chr2	gffcl	locus	133047987	133056708	.	+	.	ID=RLOC_00021776;geneIDs=FBgn0039838.3.path1;transcripts=FBgn0039838.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133047987	133056708	.	+	.	ID=FBgn0039838.3.mrna1;geneID=FBgn0039838.3.path1;Name=FBgn0039838.3;Dir=sensecoverage=99.9;identity=99.6;matches=848;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021776
Chr2	stalkie_big_nohaplotig	exon	133047987	133048002	100	+	.	Parent=FBgn0039838.3.mrna1;Target=FBgn0039838.3 1 16 +
Chr2	stalkie_big_nohaplotig	exon	133052376	133052506	98	+	.	Parent=FBgn0039838.3.mrna1;Target=FBgn0039838.3 17 147 +
Chr2	stalkie_big_nohaplotig	exon	133053994	133054084	98	+	.	Parent=FBgn0039838.3.mrna1;Target=FBgn0039838.3 148 238 +
Chr2	stalkie_big_nohaplotig	exon	133054146	133054408	100	+	.	Parent=FBgn0039838.3.mrna1;Target=FBgn0039838.3 239 501 +
Chr2	stalkie_big_nohaplotig	exon	133054747	133054897	100	+	.	Parent=FBgn0039838.3.mrna1;Target=FBgn0039838.3 502 652 +
Chr2	stalkie_big_nohaplotig	exon	133056437	133056516	100	+	.	Parent=FBgn0039838.3.mrna1;Target=FBgn0039838.3 653 732 +
Chr2	stalkie_big_nohaplotig	exon	133056590	133056708	100	+	.	Parent=FBgn0039838.3.mrna1;Target=FBgn0039838.3 733 851 +
Chr2	stalkie_big_nohaplotig	CDS	133047987	133048002	.	+	0	Parent=FBgn0039838.3.mrna1;Target=FBgn0039838.3 1 16 +
Chr2	stalkie_big_nohaplotig	CDS	133052376	133052506	.	+	2	Parent=FBgn0039838.3.mrna1;Target=FBgn0039838.3 17 147 +
Chr2	stalkie_big_nohaplotig	CDS	133053994	133054084	.	+	0	Parent=FBgn0039838.3.mrna1;Target=FBgn0039838.3 148 238 +
Chr2	stalkie_big_nohaplotig	CDS	133054146	133054408	.	+	2	Parent=FBgn0039838.3.mrna1;Target=FBgn0039838.3 239 501 +
Chr2	stalkie_big_nohaplotig	CDS	133054747	133054897	.	+	0	Parent=FBgn0039838.3.mrna1;Target=FBgn0039838.3 502 652 +
Chr2	stalkie_big_nohaplotig	CDS	133056437	133056516	.	+	2	Parent=FBgn0039838.3.mrna1;Target=FBgn0039838.3 653 732 +
Chr2	stalkie_big_nohaplotig	CDS	133056590	133056706	.	+	0	Parent=FBgn0039838.3.mrna1;Target=FBgn0039838.3 733 849 +
Chr2	gffcl	locus	133084221	133099765	.	-	.	ID=RLOC_00021777;geneIDs=FBgn0001128.1.path1;transcripts=FBgn0001128.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133084221	133099765	.	-	.	ID=FBgn0001128.1.mrna1;geneID=FBgn0001128.1.path1;Name=FBgn0001128.1;Dir=sensecoverage=99.7;identity=99.8;matches=1078;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021777
Chr2	stalkie_big_nohaplotig	exon	133084221	133084251	100	-	.	Parent=FBgn0001128.1.mrna1;Target=FBgn0001128.1 1053 1083 +
Chr2	stalkie_big_nohaplotig	exon	133086294	133086386	100	-	.	Parent=FBgn0001128.1.mrna1;Target=FBgn0001128.1 960 1052 +
Chr2	stalkie_big_nohaplotig	exon	133086451	133086604	100	-	.	Parent=FBgn0001128.1.mrna1;Target=FBgn0001128.1 806 959 +
Chr2	stalkie_big_nohaplotig	exon	133086673	133086856	99	-	.	Parent=FBgn0001128.1.mrna1;Target=FBgn0001128.1 622 805 +
Chr2	stalkie_big_nohaplotig	exon	133086942	133087130	100	-	.	Parent=FBgn0001128.1.mrna1;Target=FBgn0001128.1 433 621 +
Chr2	stalkie_big_nohaplotig	exon	133088630	133088836	99	-	.	Parent=FBgn0001128.1.mrna1;Target=FBgn0001128.1 226 432 +
Chr2	stalkie_big_nohaplotig	exon	133099397	133099574	100	-	.	Parent=FBgn0001128.1.mrna1;Target=FBgn0001128.1 48 225 +
Chr2	stalkie_big_nohaplotig	exon	133099722	133099765	100	-	.	Parent=FBgn0001128.1.mrna1;Target=FBgn0001128.1 4 47 +
Chr2	stalkie_big_nohaplotig	CDS	133084221	133084251	.	-	1	Parent=FBgn0001128.1.mrna1;Target=FBgn0001128.1 1053 1083 +
Chr2	stalkie_big_nohaplotig	CDS	133086294	133086386	.	-	1	Parent=FBgn0001128.1.mrna1;Target=FBgn0001128.1 960 1052 +
Chr2	stalkie_big_nohaplotig	CDS	133086451	133086604	.	-	2	Parent=FBgn0001128.1.mrna1;Target=FBgn0001128.1 806 959 +
Chr2	stalkie_big_nohaplotig	CDS	133086673	133086856	.	-	0	Parent=FBgn0001128.1.mrna1;Target=FBgn0001128.1 622 805 +
Chr2	stalkie_big_nohaplotig	CDS	133086942	133087130	.	-	0	Parent=FBgn0001128.1.mrna1;Target=FBgn0001128.1 433 621 +
Chr2	stalkie_big_nohaplotig	CDS	133088630	133088836	.	-	0	Parent=FBgn0001128.1.mrna1;Target=FBgn0001128.1 226 432 +
Chr2	stalkie_big_nohaplotig	CDS	133099397	133099574	.	-	1	Parent=FBgn0001128.1.mrna1;Target=FBgn0001128.1 48 225 +
Chr2	stalkie_big_nohaplotig	CDS	133099722	133099765	.	-	0	Parent=FBgn0001128.1.mrna1;Target=FBgn0001128.1 4 47 +
Chr2	gffcl	locus	133084749	133115793	.	+	.	ID=RLOC_00021778;geneIDs=FBgn0004463.path1,comp118090_c0_seq1.path1,comp155731_c1_seq1.path1;transcripts=comp155731_c1_seq1.mrna1,comp118090_c0_seq1.mrna1,FBgn0004463.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133084749	133115793	.	+	.	ID=comp155731_c1_seq1.mrna1;geneID=comp155731_c1_seq1.path1;Name=comp155731_c1_seq1;Dir=indeterminatecoverage=22.3;identity=98.0;matches=200;mismatches=3;indels=1;unknowns=0;Target=comp155731_c1_seq1 65 3 .;locus=RLOC_00021778
Chr2	stalkie_big_nohaplotig	exon	133084749	133084923	97	+	.	Parent=comp155731_c1_seq1.mrna1;Target=comp155731_c1_seq1 178 3 .
Chr2	stalkie_big_nohaplotig	exon	133090917	133090919	100	+	.	Parent=comp155731_c1_seq1.mrna1;Target=comp155731_c1_seq1 181 179 .
Chr2	stalkie_big_nohaplotig	exon	133102395	133102400	100	+	.	Parent=comp155731_c1_seq1.mrna1;Target=comp155731_c1_seq1 187 182 .
Chr2	stalkie_big_nohaplotig	exon	133104267	133104268	100	+	.	Parent=comp155731_c1_seq1.mrna1;Target=comp155731_c1_seq1 189 188 .
Chr2	stalkie_big_nohaplotig	exon	133107947	133107956	100	+	.	Parent=comp155731_c1_seq1.mrna1;Target=comp155731_c1_seq1 199 190 .
Chr2	stalkie_big_nohaplotig	exon	133115787	133115793	100	+	.	Parent=comp155731_c1_seq1.mrna1;Target=comp155731_c1_seq1 206 200 .
Chr2	stalkie_big_nohaplotig	CDS	133084749	133084811	.	+	0	Parent=comp155731_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133084889	133085232	.	+	.	ID=comp118090_c0_seq1.mrna1;geneID=comp118090_c0_seq1.path1;Name=comp118090_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=334;mismatches=3;indels=7;unknowns=0;Target=comp118090_c0_seq1 337 1 .;CDS_Target=comp118090_c0_seq1 279 214 .;locus=RLOC_00021778
Chr2	stalkie_big_nohaplotig	exon	133084889	133085232	97	+	.	Parent=comp118090_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	133085102	133085173	.	+	0	Parent=comp118090_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133102707	133104415	.	+	.	ID=FBgn0004463.mrna1;geneID=FBgn0004463.path1;Name=FBgn0004463;Dir=sensecoverage=100.0;identity=98.9;matches=1567;mismatches=17;indels=0;unknowns=0;locus=RLOC_00021778
Chr2	stalkie_big_nohaplotig	exon	133102707	133103091	98	+	.	Parent=FBgn0004463.mrna1;Target=FBgn0004463 1 385 +
Chr2	stalkie_big_nohaplotig	exon	133103154	133103918	98	+	.	Parent=FBgn0004463.mrna1;Target=FBgn0004463 386 1150 +
Chr2	stalkie_big_nohaplotig	exon	133103982	133104415	99	+	.	Parent=FBgn0004463.mrna1;Target=FBgn0004463 1151 1584 +
Chr2	stalkie_big_nohaplotig	CDS	133102707	133103091	.	+	0	Parent=FBgn0004463.mrna1;Target=FBgn0004463 1 385 +
Chr2	stalkie_big_nohaplotig	CDS	133103154	133103918	.	+	2	Parent=FBgn0004463.mrna1;Target=FBgn0004463 386 1150 +
Chr2	stalkie_big_nohaplotig	CDS	133103982	133104415	.	+	2	Parent=FBgn0004463.mrna1;Target=FBgn0004463 1151 1584 +
Chr2	gffcl	locus	133161660	133162588	.	-	.	ID=RLOC_00021779;geneIDs=FBgn0037678.1.path1;transcripts=FBgn0037678.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133161660	133162588	.	-	.	ID=FBgn0037678.1.mrna1;geneID=FBgn0037678.1.path1;Name=FBgn0037678.1;Dir=sensecoverage=100.0;identity=99.8;matches=799;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021779
Chr2	stalkie_big_nohaplotig	exon	133161660	133161950	100	-	.	Parent=FBgn0037678.1.mrna1;Target=FBgn0037678.1 511 801 +
Chr2	stalkie_big_nohaplotig	exon	133162017	133162379	100	-	.	Parent=FBgn0037678.1.mrna1;Target=FBgn0037678.1 148 510 +
Chr2	stalkie_big_nohaplotig	exon	133162442	133162588	98	-	.	Parent=FBgn0037678.1.mrna1;Target=FBgn0037678.1 1 147 +
Chr2	stalkie_big_nohaplotig	CDS	133161660	133161950	.	-	0	Parent=FBgn0037678.1.mrna1;Target=FBgn0037678.1 511 801 +
Chr2	stalkie_big_nohaplotig	CDS	133162017	133162379	.	-	0	Parent=FBgn0037678.1.mrna1;Target=FBgn0037678.1 148 510 +
Chr2	stalkie_big_nohaplotig	CDS	133162442	133162588	.	-	0	Parent=FBgn0037678.1.mrna1;Target=FBgn0037678.1 1 147 +
Chr2	gffcl	locus	133165128	133166918	.	+	.	ID=RLOC_00021780;geneIDs=FBgn0037679.1.path1;transcripts=FBgn0037679.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133165128	133166918	.	+	.	ID=FBgn0037679.1.mrna1;geneID=FBgn0037679.1.path1;Name=FBgn0037679.1;Dir=sensecoverage=100.0;identity=99.9;matches=1468;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021780
Chr2	stalkie_big_nohaplotig	exon	133165128	133165229	100	+	.	Parent=FBgn0037679.1.mrna1;Target=FBgn0037679.1 1 102 +
Chr2	stalkie_big_nohaplotig	exon	133165301	133165449	100	+	.	Parent=FBgn0037679.1.mrna1;Target=FBgn0037679.1 103 251 +
Chr2	stalkie_big_nohaplotig	exon	133165504	133165725	100	+	.	Parent=FBgn0037679.1.mrna1;Target=FBgn0037679.1 252 473 +
Chr2	stalkie_big_nohaplotig	exon	133165785	133166491	99	+	.	Parent=FBgn0037679.1.mrna1;Target=FBgn0037679.1 474 1180 +
Chr2	stalkie_big_nohaplotig	exon	133166570	133166754	100	+	.	Parent=FBgn0037679.1.mrna1;Target=FBgn0037679.1 1181 1365 +
Chr2	stalkie_big_nohaplotig	exon	133166814	133166918	99	+	.	Parent=FBgn0037679.1.mrna1;Target=FBgn0037679.1 1366 1470 +
Chr2	stalkie_big_nohaplotig	CDS	133165128	133165229	.	+	0	Parent=FBgn0037679.1.mrna1;Target=FBgn0037679.1 1 102 +
Chr2	stalkie_big_nohaplotig	CDS	133165301	133165449	.	+	0	Parent=FBgn0037679.1.mrna1;Target=FBgn0037679.1 103 251 +
Chr2	stalkie_big_nohaplotig	CDS	133165504	133165725	.	+	1	Parent=FBgn0037679.1.mrna1;Target=FBgn0037679.1 252 473 +
Chr2	stalkie_big_nohaplotig	CDS	133165785	133166491	.	+	1	Parent=FBgn0037679.1.mrna1;Target=FBgn0037679.1 474 1180 +
Chr2	stalkie_big_nohaplotig	CDS	133166570	133166754	.	+	2	Parent=FBgn0037679.1.mrna1;Target=FBgn0037679.1 1181 1365 +
Chr2	stalkie_big_nohaplotig	CDS	133166814	133166918	.	+	0	Parent=FBgn0037679.1.mrna1;Target=FBgn0037679.1 1366 1470 +
Chr2	gffcl	locus	133169345	133172337	.	-	.	ID=RLOC_00021781;geneIDs=FBgn0037680.1.path1;transcripts=FBgn0037680.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133169345	133172337	.	-	.	ID=FBgn0037680.1.mrna1;geneID=FBgn0037680.1.path1;Name=FBgn0037680.1;Dir=sensecoverage=100.0;identity=99.4;matches=775;mismatches=5;indels=0;unknowns=0;locus=RLOC_00021781
Chr2	stalkie_big_nohaplotig	exon	133169345	133169443	100	-	.	Parent=FBgn0037680.1.mrna1;Target=FBgn0037680.1 682 780 +
Chr2	stalkie_big_nohaplotig	exon	133169504	133169740	100	-	.	Parent=FBgn0037680.1.mrna1;Target=FBgn0037680.1 445 681 +
Chr2	stalkie_big_nohaplotig	exon	133170314	133170408	100	-	.	Parent=FBgn0037680.1.mrna1;Target=FBgn0037680.1 350 444 +
Chr2	stalkie_big_nohaplotig	exon	133171866	133171995	98	-	.	Parent=FBgn0037680.1.mrna1;Target=FBgn0037680.1 220 349 +
Chr2	stalkie_big_nohaplotig	exon	133172055	133172193	99	-	.	Parent=FBgn0037680.1.mrna1;Target=FBgn0037680.1 81 219 +
Chr2	stalkie_big_nohaplotig	exon	133172258	133172337	97	-	.	Parent=FBgn0037680.1.mrna1;Target=FBgn0037680.1 1 80 +
Chr2	stalkie_big_nohaplotig	CDS	133169345	133169443	.	-	0	Parent=FBgn0037680.1.mrna1;Target=FBgn0037680.1 682 780 +
Chr2	stalkie_big_nohaplotig	CDS	133169504	133169740	.	-	0	Parent=FBgn0037680.1.mrna1;Target=FBgn0037680.1 445 681 +
Chr2	stalkie_big_nohaplotig	CDS	133170314	133170408	.	-	2	Parent=FBgn0037680.1.mrna1;Target=FBgn0037680.1 350 444 +
Chr2	stalkie_big_nohaplotig	CDS	133171866	133171995	.	-	0	Parent=FBgn0037680.1.mrna1;Target=FBgn0037680.1 220 349 +
Chr2	stalkie_big_nohaplotig	CDS	133172055	133172193	.	-	1	Parent=FBgn0037680.1.mrna1;Target=FBgn0037680.1 81 219 +
Chr2	stalkie_big_nohaplotig	CDS	133172258	133172337	.	-	0	Parent=FBgn0037680.1.mrna1;Target=FBgn0037680.1 1 80 +
Chr2	gffcl	locus	133169810	133170054	.	+	.	ID=RLOC_00021782;geneIDs=comp118985_c0_seq1.path1;transcripts=comp118985_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133169810	133170054	.	+	.	ID=comp118985_c0_seq1.mrna1;geneID=comp118985_c0_seq1.path1;Name=comp118985_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=242;mismatches=3;indels=0;unknowns=0;Target=comp118985_c0_seq1 245 1 .;CDS_Target=comp118985_c0_seq1 108 58 .;locus=RLOC_00021782
Chr2	stalkie_big_nohaplotig	exon	133169810	133170054	98	+	.	Parent=comp118985_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	133169867	133169917	.	+	0	Parent=comp118985_c0_seq1.mrna1
Chr2	gffcl	locus	133183300	133187336	.	+	.	ID=RLOC_00021783;geneIDs=FBgn0037754.1.path1,comp154421_c1_seq1.path1;transcripts=comp154421_c1_seq1.mrna1,FBgn0037754.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133183300	133187192	.	+	.	ID=comp154421_c1_seq1.mrna1;geneID=comp154421_c1_seq1.path1;Name=comp154421_c1_seq1;Dir=sensecoverage=71.1;identity=99.6;matches=536;mismatches=2;indels=0;unknowns=100;locus=RLOC_00021783
Chr2	stalkie_big_nohaplotig	exon	133183300	133183589	98	+	.	Parent=comp154421_c1_seq1.mrna1;Target=comp154421_c1_seq1 260 549 +
Chr2	stalkie_big_nohaplotig	exon	133184028	133184191	100	+	.	Parent=comp154421_c1_seq1.mrna1;Target=comp154421_c1_seq1 550 713 +
Chr2	stalkie_big_nohaplotig	exon	133187009	133187192	100	+	.	Parent=comp154421_c1_seq1.mrna1;Target=comp154421_c1_seq1 714 897 +
Chr2	stalkie_big_nohaplotig	CDS	133184054	133184191	.	+	0	Parent=comp154421_c1_seq1.mrna1;Target=comp154421_c1_seq1 576 713 +
Chr2	stalkie_big_nohaplotig	CDS	133187009	133187191	.	+	0	Parent=comp154421_c1_seq1.mrna1;Target=comp154421_c1_seq1 714 896 +
Chr2	stalkie_big_nohaplotig	mRNA	133183952	133187336	.	+	.	ID=FBgn0037754.1.mrna1;geneID=FBgn0037754.1.path1;Name=FBgn0037754.1;Dir=sensecoverage=100.0;identity=99.8;matches=500;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021783
Chr2	stalkie_big_nohaplotig	exon	133183952	133184191	100	+	.	Parent=FBgn0037754.1.mrna1;Target=FBgn0037754.1 1 240 +
Chr2	stalkie_big_nohaplotig	exon	133187009	133187194	100	+	.	Parent=FBgn0037754.1.mrna1;Target=FBgn0037754.1 241 426 +
Chr2	stalkie_big_nohaplotig	exon	133187262	133187336	98	+	.	Parent=FBgn0037754.1.mrna1;Target=FBgn0037754.1 427 501 +
Chr2	stalkie_big_nohaplotig	CDS	133183952	133184191	.	+	0	Parent=FBgn0037754.1.mrna1;Target=FBgn0037754.1 1 240 +
Chr2	stalkie_big_nohaplotig	CDS	133187009	133187194	.	+	0	Parent=FBgn0037754.1.mrna1;Target=FBgn0037754.1 241 426 +
Chr2	stalkie_big_nohaplotig	CDS	133187262	133187336	.	+	0	Parent=FBgn0037754.1.mrna1;Target=FBgn0037754.1 427 501 +
Chr2	gffcl	locus	133188054	133190012	.	.	.	ID=RLOC_00021784;geneIDs=comp155066_c0_seq1.path1,comp161250_c0_seq1.path1;transcripts=comp161250_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133188054	133189103	.	-	.	ID=comp161250_c0_seq1.mrna1;geneID=comp161250_c0_seq1.path1;Name=comp161250_c0_seq1;Dir=indeterminatecoverage=100.0;identity=87.2;matches=997;mismatches=46;indels=100;unknowns=0;Target=comp161250_c0_seq1 1136 1 .;CDS_Target=comp161250_c0_seq1 91 41 .;locus=RLOC_00021784
Chr2	stalkie_big_nohaplotig	exon	133188054	133189103	87	-	.	Parent=comp161250_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	133189014	133189063	.	-	0	Parent=comp161250_c0_seq1.mrna1
Chr2	gffcl	locus	133190628	133190932	.	-	.	ID=RLOC_00021785;geneIDs=comp129418_c1_seq1.path1;transcripts=comp129418_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133190628	133190932	.	-	.	ID=comp129418_c1_seq1.mrna1;geneID=comp129418_c1_seq1.path1;Name=comp129418_c1_seq1;Dir=indeterminatecoverage=94.4;identity=99.7;matches=304;mismatches=1;indels=0;unknowns=0;Target=comp129418_c1_seq1 319 15 .;CDS_Target=comp129418_c1_seq1 207 133 .;locus=RLOC_00021785
Chr2	stalkie_big_nohaplotig	exon	133190628	133190932	99	-	.	Parent=comp129418_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	133190740	133190814	.	-	0	Parent=comp129418_c1_seq1.mrna1
Chr2	gffcl	locus	133195023	133196099	.	+	.	ID=RLOC_00021786;geneIDs=comp152318_c0_seq1.path1;transcripts=comp152318_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133195023	133196099	.	+	.	ID=comp152318_c0_seq1.mrna1;geneID=comp152318_c0_seq1.path1;Name=comp152318_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1073;mismatches=4;indels=3;unknowns=0;Target=comp152318_c0_seq1 1080 1 .;CDS_Target=comp152318_c0_seq1 751 578 .;locus=RLOC_00021786
Chr2	stalkie_big_nohaplotig	exon	133195023	133196099	99	+	.	Parent=comp152318_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	133195597	133195770	.	+	0	Parent=comp152318_c0_seq1.mrna1
Chr2	gffcl	locus	133196422	133198432	.	-	.	ID=RLOC_00021787;geneIDs=FBgn0037755.path1;transcripts=FBgn0037755.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133196422	133198432	.	-	.	ID=FBgn0037755.mrna1;geneID=FBgn0037755.path1;Name=FBgn0037755;Dir=sensecoverage=100.0;identity=98.4;matches=679;mismatches=8;indels=3;unknowns=0;locus=RLOC_00021787
Chr2	stalkie_big_nohaplotig	exon	133196422	133196879	97	-	.	Parent=FBgn0037755.mrna1;Target=FBgn0037755 230 690 +
Chr2	stalkie_big_nohaplotig	exon	133196937	133197067	100	-	.	Parent=FBgn0037755.mrna1;Target=FBgn0037755 99 229 +
Chr2	stalkie_big_nohaplotig	exon	133198335	133198432	100	-	.	Parent=FBgn0037755.mrna1;Target=FBgn0037755 1 98 +
Chr2	stalkie_big_nohaplotig	CDS	133196422	133196879	.	-	2	Parent=FBgn0037755.mrna1;Target=FBgn0037755 230 690 +
Chr2	stalkie_big_nohaplotig	CDS	133196937	133197067	.	-	1	Parent=FBgn0037755.mrna1;Target=FBgn0037755 99 229 +
Chr2	stalkie_big_nohaplotig	CDS	133198335	133198432	.	-	0	Parent=FBgn0037755.mrna1;Target=FBgn0037755 1 98 +
Chr2	gffcl	locus	133198434	133199721	.	-	.	ID=RLOC_00021788;geneIDs=comp156211_c1_seq1.path1;transcripts=comp156211_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133198434	133199721	.	-	.	ID=comp156211_c1_seq1.mrna1;geneID=comp156211_c1_seq1.path1;Name=comp156211_c1_seq1;Dir=sensecoverage=99.9;identity=100.0;matches=803;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021788
Chr2	stalkie_big_nohaplotig	exon	133198434	133198465	100	-	.	Parent=comp156211_c1_seq1.mrna1;Target=comp156211_c1_seq1 773 804 +
Chr2	stalkie_big_nohaplotig	exon	133198519	133198659	100	-	.	Parent=comp156211_c1_seq1.mrna1;Target=comp156211_c1_seq1 632 772 +
Chr2	stalkie_big_nohaplotig	exon	133198926	133199159	100	-	.	Parent=comp156211_c1_seq1.mrna1;Target=comp156211_c1_seq1 398 631 +
Chr2	stalkie_big_nohaplotig	exon	133199326	133199721	100	-	.	Parent=comp156211_c1_seq1.mrna1;Target=comp156211_c1_seq1 2 397 +
Chr2	stalkie_big_nohaplotig	CDS	133198436	133198465	.	-	0	Parent=comp156211_c1_seq1.mrna1;Target=comp156211_c1_seq1 773 802 +
Chr2	stalkie_big_nohaplotig	CDS	133198519	133198659	.	-	0	Parent=comp156211_c1_seq1.mrna1;Target=comp156211_c1_seq1 632 772 +
Chr2	stalkie_big_nohaplotig	CDS	133198926	133199159	.	-	0	Parent=comp156211_c1_seq1.mrna1;Target=comp156211_c1_seq1 398 631 +
Chr2	stalkie_big_nohaplotig	CDS	133199326	133199622	.	-	0	Parent=comp156211_c1_seq1.mrna1;Target=comp156211_c1_seq1 101 397 +
Chr2	gffcl	locus	133201225	133201793	.	+	.	ID=RLOC_00021789;geneIDs=FBgn0039732.1.path1;transcripts=FBgn0039732.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133201225	133201793	.	+	.	ID=FBgn0039732.1.mrna1;geneID=FBgn0039732.1.path1;Name=FBgn0039732.1;Dir=sensecoverage=100.0;identity=99.8;matches=485;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021789
Chr2	stalkie_big_nohaplotig	exon	133201225	133201361	99	+	.	Parent=FBgn0039732.1.mrna1;Target=FBgn0039732.1 1 137 +
Chr2	stalkie_big_nohaplotig	exon	133201445	133201793	100	+	.	Parent=FBgn0039732.1.mrna1;Target=FBgn0039732.1 138 486 +
Chr2	stalkie_big_nohaplotig	CDS	133201225	133201361	.	+	0	Parent=FBgn0039732.1.mrna1;Target=FBgn0039732.1 1 137 +
Chr2	stalkie_big_nohaplotig	CDS	133201445	133201793	.	+	1	Parent=FBgn0039732.1.mrna1;Target=FBgn0039732.1 138 486 +
Chr2	gffcl	locus	133202763	133204791	.	-	.	ID=RLOC_00021790;geneIDs=FBgn0039731.1.path1;transcripts=FBgn0039731.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133202763	133204791	.	-	.	ID=FBgn0039731.1.mrna1;geneID=FBgn0039731.1.path1;Name=FBgn0039731.1;Dir=sensecoverage=100.0;identity=99.9;matches=1451;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021790
Chr2	stalkie_big_nohaplotig	exon	133202763	133202851	100	-	.	Parent=FBgn0039731.1.mrna1;Target=FBgn0039731.1 1364 1452 +
Chr2	stalkie_big_nohaplotig	exon	133202912	133203245	100	-	.	Parent=FBgn0039731.1.mrna1;Target=FBgn0039731.1 1030 1363 +
Chr2	stalkie_big_nohaplotig	exon	133203581	133203788	100	-	.	Parent=FBgn0039731.1.mrna1;Target=FBgn0039731.1 822 1029 +
Chr2	stalkie_big_nohaplotig	exon	133203845	133204143	100	-	.	Parent=FBgn0039731.1.mrna1;Target=FBgn0039731.1 523 821 +
Chr2	stalkie_big_nohaplotig	exon	133204205	133204549	100	-	.	Parent=FBgn0039731.1.mrna1;Target=FBgn0039731.1 178 522 +
Chr2	stalkie_big_nohaplotig	exon	133204615	133204791	99	-	.	Parent=FBgn0039731.1.mrna1;Target=FBgn0039731.1 1 177 +
Chr2	stalkie_big_nohaplotig	CDS	133202763	133202851	.	-	2	Parent=FBgn0039731.1.mrna1;Target=FBgn0039731.1 1364 1452 +
Chr2	stalkie_big_nohaplotig	CDS	133202912	133203245	.	-	0	Parent=FBgn0039731.1.mrna1;Target=FBgn0039731.1 1030 1363 +
Chr2	stalkie_big_nohaplotig	CDS	133203581	133203788	.	-	1	Parent=FBgn0039731.1.mrna1;Target=FBgn0039731.1 822 1029 +
Chr2	stalkie_big_nohaplotig	CDS	133203845	133204143	.	-	0	Parent=FBgn0039731.1.mrna1;Target=FBgn0039731.1 523 821 +
Chr2	stalkie_big_nohaplotig	CDS	133204205	133204549	.	-	0	Parent=FBgn0039731.1.mrna1;Target=FBgn0039731.1 178 522 +
Chr2	stalkie_big_nohaplotig	CDS	133204615	133204791	.	-	0	Parent=FBgn0039731.1.mrna1;Target=FBgn0039731.1 1 177 +
Chr2	gffcl	locus	133207072	133208565	.	+	.	ID=RLOC_00021791;geneIDs=FBgn0039730.1.path1;transcripts=FBgn0039730.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133207072	133208565	.	+	.	ID=FBgn0039730.1.mrna1;geneID=FBgn0039730.1.path1;Name=FBgn0039730.1;Dir=sensecoverage=99.3;identity=99.5;matches=1227;mismatches=6;indels=0;unknowns=0;locus=RLOC_00021791
Chr2	stalkie_big_nohaplotig	exon	133207072	133207369	100	+	.	Parent=FBgn0039730.1.mrna1;Target=FBgn0039730.1 10 307 +
Chr2	stalkie_big_nohaplotig	exon	133207435	133207950	99	+	.	Parent=FBgn0039730.1.mrna1;Target=FBgn0039730.1 308 823 +
Chr2	stalkie_big_nohaplotig	exon	133208089	133208275	100	+	.	Parent=FBgn0039730.1.mrna1;Target=FBgn0039730.1 824 1010 +
Chr2	stalkie_big_nohaplotig	exon	133208334	133208565	99	+	.	Parent=FBgn0039730.1.mrna1;Target=FBgn0039730.1 1011 1242 +
Chr2	stalkie_big_nohaplotig	CDS	133207072	133207369	.	+	0	Parent=FBgn0039730.1.mrna1;Target=FBgn0039730.1 10 307 +
Chr2	stalkie_big_nohaplotig	CDS	133207435	133207950	.	+	2	Parent=FBgn0039730.1.mrna1;Target=FBgn0039730.1 308 823 +
Chr2	stalkie_big_nohaplotig	CDS	133208089	133208275	.	+	2	Parent=FBgn0039730.1.mrna1;Target=FBgn0039730.1 824 1010 +
Chr2	stalkie_big_nohaplotig	CDS	133208334	133208565	.	+	1	Parent=FBgn0039730.1.mrna1;Target=FBgn0039730.1 1011 1242 +
Chr2	gffcl	locus	133210060	133210679	.	-	.	ID=RLOC_00021792;geneIDs=comp152320_c0_seq1.path1;transcripts=comp152320_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133210060	133210679	.	-	.	ID=comp152320_c0_seq1.mrna1;geneID=comp152320_c0_seq1.path1;Name=comp152320_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=608;mismatches=9;indels=3;unknowns=0;Target=comp152320_c0_seq1 617 1 .;CDS_Target=comp152320_c0_seq1 226 68 .;locus=RLOC_00021792
Chr2	stalkie_big_nohaplotig	exon	133210060	133210679	98	-	.	Parent=comp152320_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	133210454	133210612	.	-	0	Parent=comp152320_c0_seq1.mrna1
Chr2	gffcl	locus	133213141	133229073	.	+	.	ID=RLOC_00021793;geneIDs=FBgn0000032.1.path1;transcripts=FBgn0000032.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133213141	133229073	.	+	.	ID=FBgn0000032.1.mrna1;geneID=FBgn0000032.1.path1;Name=FBgn0000032.1;Dir=sensecoverage=100.0;identity=98.9;matches=1315;mismatches=14;indels=0;unknowns=0;locus=RLOC_00021793
Chr2	stalkie_big_nohaplotig	exon	133213141	133213311	100	+	.	Parent=FBgn0000032.1.mrna1;Target=FBgn0000032.1 1 171 +
Chr2	stalkie_big_nohaplotig	exon	133213392	133213490	97	+	.	Parent=FBgn0000032.1.mrna1;Target=FBgn0000032.1 172 270 +
Chr2	stalkie_big_nohaplotig	exon	133227795	133228034	97	+	.	Parent=FBgn0000032.1.mrna1;Target=FBgn0000032.1 271 510 +
Chr2	stalkie_big_nohaplotig	exon	133228099	133228548	99	+	.	Parent=FBgn0000032.1.mrna1;Target=FBgn0000032.1 511 960 +
Chr2	stalkie_big_nohaplotig	exon	133228645	133228909	99	+	.	Parent=FBgn0000032.1.mrna1;Target=FBgn0000032.1 961 1225 +
Chr2	stalkie_big_nohaplotig	exon	133228970	133229073	98	+	.	Parent=FBgn0000032.1.mrna1;Target=FBgn0000032.1 1226 1329 +
Chr2	stalkie_big_nohaplotig	CDS	133213141	133213311	.	+	0	Parent=FBgn0000032.1.mrna1;Target=FBgn0000032.1 1 171 +
Chr2	stalkie_big_nohaplotig	CDS	133213392	133213490	.	+	0	Parent=FBgn0000032.1.mrna1;Target=FBgn0000032.1 172 270 +
Chr2	stalkie_big_nohaplotig	CDS	133227795	133228034	.	+	0	Parent=FBgn0000032.1.mrna1;Target=FBgn0000032.1 271 510 +
Chr2	stalkie_big_nohaplotig	CDS	133228099	133228548	.	+	0	Parent=FBgn0000032.1.mrna1;Target=FBgn0000032.1 511 960 +
Chr2	stalkie_big_nohaplotig	CDS	133228645	133228909	.	+	0	Parent=FBgn0000032.1.mrna1;Target=FBgn0000032.1 961 1225 +
Chr2	stalkie_big_nohaplotig	CDS	133228970	133229073	.	+	2	Parent=FBgn0000032.1.mrna1;Target=FBgn0000032.1 1226 1329 +
Chr2	gffcl	locus	133364120	133366847	.	+	.	ID=RLOC_00021794;geneIDs=FBgn0038268.1.path1;transcripts=FBgn0038268.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133364120	133366847	.	+	.	ID=FBgn0038268.1.mrna1;geneID=FBgn0038268.1.path1;Name=FBgn0038268.1;Dir=sensecoverage=100.0;identity=99.6;matches=1264;mismatches=5;indels=0;unknowns=0;locus=RLOC_00021794
Chr2	stalkie_big_nohaplotig	exon	133364120	133364404	100	+	.	Parent=FBgn0038268.1.mrna1;Target=FBgn0038268.1 1 285 +
Chr2	stalkie_big_nohaplotig	exon	133364491	133365068	99	+	.	Parent=FBgn0038268.1.mrna1;Target=FBgn0038268.1 286 863 +
Chr2	stalkie_big_nohaplotig	exon	133366377	133366577	100	+	.	Parent=FBgn0038268.1.mrna1;Target=FBgn0038268.1 864 1064 +
Chr2	stalkie_big_nohaplotig	exon	133366643	133366847	99	+	.	Parent=FBgn0038268.1.mrna1;Target=FBgn0038268.1 1065 1269 +
Chr2	stalkie_big_nohaplotig	CDS	133364120	133364404	.	+	0	Parent=FBgn0038268.1.mrna1;Target=FBgn0038268.1 1 285 +
Chr2	stalkie_big_nohaplotig	CDS	133364491	133365068	.	+	0	Parent=FBgn0038268.1.mrna1;Target=FBgn0038268.1 286 863 +
Chr2	stalkie_big_nohaplotig	CDS	133366377	133366577	.	+	1	Parent=FBgn0038268.1.mrna1;Target=FBgn0038268.1 864 1064 +
Chr2	stalkie_big_nohaplotig	CDS	133366643	133366847	.	+	1	Parent=FBgn0038268.1.mrna1;Target=FBgn0038268.1 1065 1269 +
Chr2	gffcl	locus	133367243	133367655	.	-	.	ID=RLOC_00021795;geneIDs=comp93035_c0_seq1.path1;transcripts=comp93035_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133367243	133367655	.	-	.	ID=comp93035_c0_seq1.mrna1;geneID=comp93035_c0_seq1.path1;Name=comp93035_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=413;mismatches=0;indels=0;unknowns=0;Target=comp93035_c0_seq1 413 1 .;CDS_Target=comp93035_c0_seq1 104 42 .;locus=RLOC_00021795
Chr2	stalkie_big_nohaplotig	exon	133367243	133367655	100	-	.	Parent=comp93035_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	133367552	133367614	.	-	0	Parent=comp93035_c0_seq1.mrna1
Chr2	gffcl	locus	133368637	133372305	.	-	.	ID=RLOC_00021796;geneIDs=FBgn0038269.1.path1;transcripts=FBgn0038269.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133368637	133372305	.	-	.	ID=FBgn0038269.1.mrna1;geneID=FBgn0038269.1.path1;Name=FBgn0038269.1;Dir=sensecoverage=100.0;identity=99.8;matches=2734;mismatches=5;indels=0;unknowns=0;locus=RLOC_00021796
Chr2	stalkie_big_nohaplotig	exon	133368637	133368708	100	-	.	Parent=FBgn0038269.1.mrna1;Target=FBgn0038269.1 2668 2739 +
Chr2	stalkie_big_nohaplotig	exon	133368785	133369324	100	-	.	Parent=FBgn0038269.1.mrna1;Target=FBgn0038269.1 2128 2667 +
Chr2	stalkie_big_nohaplotig	exon	133369790	133369975	100	-	.	Parent=FBgn0038269.1.mrna1;Target=FBgn0038269.1 1942 2127 +
Chr2	stalkie_big_nohaplotig	exon	133370052	133370294	100	-	.	Parent=FBgn0038269.1.mrna1;Target=FBgn0038269.1 1699 1941 +
Chr2	stalkie_big_nohaplotig	exon	133370366	133371356	99	-	.	Parent=FBgn0038269.1.mrna1;Target=FBgn0038269.1 708 1698 +
Chr2	stalkie_big_nohaplotig	exon	133371427	133371813	100	-	.	Parent=FBgn0038269.1.mrna1;Target=FBgn0038269.1 321 707 +
Chr2	stalkie_big_nohaplotig	exon	133371878	133372059	99	-	.	Parent=FBgn0038269.1.mrna1;Target=FBgn0038269.1 139 320 +
Chr2	stalkie_big_nohaplotig	exon	133372168	133372305	97	-	.	Parent=FBgn0038269.1.mrna1;Target=FBgn0038269.1 1 138 +
Chr2	stalkie_big_nohaplotig	CDS	133368637	133368708	.	-	0	Parent=FBgn0038269.1.mrna1;Target=FBgn0038269.1 2668 2739 +
Chr2	stalkie_big_nohaplotig	CDS	133368785	133369324	.	-	0	Parent=FBgn0038269.1.mrna1;Target=FBgn0038269.1 2128 2667 +
Chr2	stalkie_big_nohaplotig	CDS	133369790	133369975	.	-	0	Parent=FBgn0038269.1.mrna1;Target=FBgn0038269.1 1942 2127 +
Chr2	stalkie_big_nohaplotig	CDS	133370052	133370294	.	-	0	Parent=FBgn0038269.1.mrna1;Target=FBgn0038269.1 1699 1941 +
Chr2	stalkie_big_nohaplotig	CDS	133370366	133371356	.	-	1	Parent=FBgn0038269.1.mrna1;Target=FBgn0038269.1 708 1698 +
Chr2	stalkie_big_nohaplotig	CDS	133371427	133371813	.	-	1	Parent=FBgn0038269.1.mrna1;Target=FBgn0038269.1 321 707 +
Chr2	stalkie_big_nohaplotig	CDS	133371878	133372059	.	-	0	Parent=FBgn0038269.1.mrna1;Target=FBgn0038269.1 139 320 +
Chr2	stalkie_big_nohaplotig	CDS	133372168	133372305	.	-	0	Parent=FBgn0038269.1.mrna1;Target=FBgn0038269.1 1 138 +
Chr2	gffcl	locus	133377448	133378557	.	+	.	ID=RLOC_00021797;geneIDs=FBgn0067628.1.path1;transcripts=FBgn0067628.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133377448	133378557	.	+	.	ID=FBgn0067628.1.mrna1;geneID=FBgn0067628.1.path1;Name=FBgn0067628.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1109;mismatches=1;indels=0;unknowns=0;Target=FBgn0067628.1 1110 1 .;locus=RLOC_00021797
Chr2	stalkie_big_nohaplotig	exon	133377448	133378557	99	+	.	Parent=FBgn0067628.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	133377448	133378557	.	+	0	Parent=FBgn0067628.1.mrna1
Chr2	gffcl	locus	133380348	133382483	.	+	.	ID=RLOC_00021798;geneIDs=FBgn0067629.1.path1;transcripts=FBgn0067629.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133380348	133382483	.	+	.	ID=FBgn0067629.1.mrna1;geneID=FBgn0067629.1.path1;Name=FBgn0067629.1;Dir=sensecoverage=100.0;identity=100.0;matches=1086;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021798
Chr2	stalkie_big_nohaplotig	exon	133380348	133381045	100	+	.	Parent=FBgn0067629.1.mrna1;Target=FBgn0067629.1 1 698 +
Chr2	stalkie_big_nohaplotig	exon	133381125	133381350	100	+	.	Parent=FBgn0067629.1.mrna1;Target=FBgn0067629.1 699 924 +
Chr2	stalkie_big_nohaplotig	exon	133382322	133382483	100	+	.	Parent=FBgn0067629.1.mrna1;Target=FBgn0067629.1 925 1086 +
Chr2	stalkie_big_nohaplotig	CDS	133380348	133381045	.	+	0	Parent=FBgn0067629.1.mrna1;Target=FBgn0067629.1 1 698 +
Chr2	stalkie_big_nohaplotig	CDS	133381125	133381350	.	+	1	Parent=FBgn0067629.1.mrna1;Target=FBgn0067629.1 699 924 +
Chr2	stalkie_big_nohaplotig	CDS	133382322	133382483	.	+	0	Parent=FBgn0067629.1.mrna1;Target=FBgn0067629.1 925 1086 +
Chr2	gffcl	locus	133382893	133383762	.	-	.	ID=RLOC_00021799;geneIDs=FBgn0004597.1.path1;transcripts=FBgn0004597.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133382893	133383762	.	-	.	ID=FBgn0004597.1.mrna1;geneID=FBgn0004597.1.path1;Name=FBgn0004597.1;Dir=sensecoverage=100.0;identity=99.5;matches=800;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021799
Chr2	stalkie_big_nohaplotig	exon	133382893	133383105	99	-	.	Parent=FBgn0004597.1.mrna1;Target=FBgn0004597.1 592 804 +
Chr2	stalkie_big_nohaplotig	exon	133383172	133383762	99	-	.	Parent=FBgn0004597.1.mrna1;Target=FBgn0004597.1 1 591 +
Chr2	stalkie_big_nohaplotig	CDS	133382893	133383105	.	-	0	Parent=FBgn0004597.1.mrna1;Target=FBgn0004597.1 592 804 +
Chr2	stalkie_big_nohaplotig	CDS	133383172	133383762	.	-	0	Parent=FBgn0004597.1.mrna1;Target=FBgn0004597.1 1 591 +
Chr2	gffcl	locus	133385135	133400071	.	.	.	ID=RLOC_00021800;geneIDs=FBgn0039727.1.path1,comp147365_c0_seq1.path1;transcripts=FBgn0039727.1.mrna1,comp147365_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133385135	133400071	.	+	.	ID=FBgn0039727.1.mrna1;geneID=FBgn0039727.1.path1;Name=FBgn0039727.1;Dir=sensecoverage=99.5;identity=99.5;matches=9221;mismatches=47;indels=3;unknowns=0;locus=RLOC_00021800
Chr2	stalkie_big_nohaplotig	exon	133385135	133385802	99	+	.	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 1 668 +
Chr2	stalkie_big_nohaplotig	exon	133385863	133386469	99	+	.	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 669 1275 +
Chr2	stalkie_big_nohaplotig	exon	133388425	133389763	99	+	.	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 1276 2614 +
Chr2	stalkie_big_nohaplotig	exon	133389834	133390780	99	+	.	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 2615 3561 +
Chr2	stalkie_big_nohaplotig	exon	133390841	133391039	98	+	.	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 3562 3763 +
Chr2	stalkie_big_nohaplotig	exon	133391847	133392496	99	+	.	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 3764 4413 +
Chr2	stalkie_big_nohaplotig	exon	133392561	133393021	100	+	.	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 4414 4874 +
Chr2	stalkie_big_nohaplotig	exon	133393083	133394453	99	+	.	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 4875 6245 +
Chr2	stalkie_big_nohaplotig	exon	133395150	133395306	100	+	.	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 6246 6402 +
Chr2	stalkie_big_nohaplotig	exon	133395606	133395833	97	+	.	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 6403 6630 +
Chr2	stalkie_big_nohaplotig	exon	133395907	133396955	99	+	.	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 6631 7679 +
Chr2	stalkie_big_nohaplotig	exon	133398298	133398383	100	+	.	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 7680 7765 +
Chr2	stalkie_big_nohaplotig	exon	133398453	133398720	99	+	.	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 7766 8033 +
Chr2	stalkie_big_nohaplotig	exon	133398776	133399528	99	+	.	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 8034 8786 +
Chr2	stalkie_big_nohaplotig	exon	133399587	133400071	100	+	.	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 8787 9271 +
Chr2	stalkie_big_nohaplotig	CDS	133385135	133385802	.	+	0	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 1 668 +
Chr2	stalkie_big_nohaplotig	CDS	133385863	133386469	.	+	1	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 669 1275 +
Chr2	stalkie_big_nohaplotig	CDS	133388425	133389763	.	+	0	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 1276 2614 +
Chr2	stalkie_big_nohaplotig	CDS	133389834	133390780	.	+	2	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 2615 3561 +
Chr2	stalkie_big_nohaplotig	CDS	133390841	133391039	.	+	0	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 3562 3763 +
Chr2	stalkie_big_nohaplotig	CDS	133391847	133392496	.	+	2	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 3764 4413 +
Chr2	stalkie_big_nohaplotig	CDS	133392561	133393021	.	+	0	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 4414 4874 +
Chr2	stalkie_big_nohaplotig	CDS	133393083	133394453	.	+	1	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 4875 6245 +
Chr2	stalkie_big_nohaplotig	CDS	133395150	133395306	.	+	1	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 6246 6402 +
Chr2	stalkie_big_nohaplotig	CDS	133395606	133395833	.	+	0	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 6403 6630 +
Chr2	stalkie_big_nohaplotig	CDS	133395907	133396955	.	+	0	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 6631 7679 +
Chr2	stalkie_big_nohaplotig	CDS	133398298	133398383	.	+	1	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 7680 7765 +
Chr2	stalkie_big_nohaplotig	CDS	133398453	133398720	.	+	2	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 7766 8033 +
Chr2	stalkie_big_nohaplotig	CDS	133398776	133399528	.	+	1	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 8034 8786 +
Chr2	stalkie_big_nohaplotig	CDS	133399587	133400070	.	+	1	Parent=FBgn0039727.1.mrna1;Target=FBgn0039727.1 8787 9270 +
Chr2	stalkie_big_nohaplotig	mRNA	133394430	133395171	.	-	.	ID=comp147365_c0_seq1.mrna1;geneID=comp147365_c0_seq1.path1;Name=comp147365_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=742;mismatches=0;indels=0;unknowns=0;Target=comp147365_c0_seq1 742 1 .;CDS_Target=comp147365_c0_seq1 383 303 .;locus=RLOC_00021800
Chr2	stalkie_big_nohaplotig	exon	133394430	133395171	100	-	.	Parent=comp147365_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	133394789	133394869	.	-	0	Parent=comp147365_c0_seq1.mrna1
Chr2	gffcl	locus	133413026	133433676	.	-	.	ID=RLOC_00021801;geneIDs=FBgn0004622.1.path1,comp66866_c0_seq1.path1,comp162180_c4_seq1.path1;transcripts=comp162180_c4_seq1.mrna1,FBgn0004622.1.mrna1,comp66866_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133413026	133433676	.	-	.	ID=comp162180_c4_seq1.mrna1;geneID=comp162180_c4_seq1.path1;Name=comp162180_c4_seq1;Dir=antisensecoverage=70.9;identity=100.0;matches=2264;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021801
Chr2	stalkie_big_nohaplotig	exon	133413026	133413764	99	-	.	Parent=comp162180_c4_seq1.mrna1;Target=comp162180_c4_seq1 746 1484 -
Chr2	stalkie_big_nohaplotig	exon	133418277	133418342	100	-	.	Parent=comp162180_c4_seq1.mrna1;Target=comp162180_c4_seq1 1485 1550 -
Chr2	stalkie_big_nohaplotig	exon	133418428	133418591	100	-	.	Parent=comp162180_c4_seq1.mrna1;Target=comp162180_c4_seq1 1551 1714 -
Chr2	stalkie_big_nohaplotig	exon	133421635	133421831	100	-	.	Parent=comp162180_c4_seq1.mrna1;Target=comp162180_c4_seq1 1715 1911 -
Chr2	stalkie_big_nohaplotig	exon	133421949	133422099	100	-	.	Parent=comp162180_c4_seq1.mrna1;Target=comp162180_c4_seq1 1912 2062 -
Chr2	stalkie_big_nohaplotig	exon	133426892	133427104	100	-	.	Parent=comp162180_c4_seq1.mrna1;Target=comp162180_c4_seq1 2063 2275 -
Chr2	stalkie_big_nohaplotig	exon	133427311	133427485	100	-	.	Parent=comp162180_c4_seq1.mrna1;Target=comp162180_c4_seq1 2276 2450 -
Chr2	stalkie_big_nohaplotig	exon	133427929	133428086	100	-	.	Parent=comp162180_c4_seq1.mrna1;Target=comp162180_c4_seq1 2451 2608 -
Chr2	stalkie_big_nohaplotig	exon	133433275	133433676	100	-	.	Parent=comp162180_c4_seq1.mrna1;Target=comp162180_c4_seq1 2609 3010 -
Chr2	stalkie_big_nohaplotig	CDS	133413463	133413764	.	-	2	Parent=comp162180_c4_seq1.mrna1;Target=comp162180_c4_seq1 1183 1484 .
Chr2	stalkie_big_nohaplotig	CDS	133418277	133418342	.	-	2	Parent=comp162180_c4_seq1.mrna1;Target=comp162180_c4_seq1 1485 1550 .
Chr2	stalkie_big_nohaplotig	CDS	133418428	133418591	.	-	1	Parent=comp162180_c4_seq1.mrna1;Target=comp162180_c4_seq1 1551 1714 .
Chr2	stalkie_big_nohaplotig	CDS	133421635	133421831	.	-	0	Parent=comp162180_c4_seq1.mrna1;Target=comp162180_c4_seq1 1715 1911 .
Chr2	stalkie_big_nohaplotig	CDS	133421949	133422099	.	-	1	Parent=comp162180_c4_seq1.mrna1;Target=comp162180_c4_seq1 1912 2062 .
Chr2	stalkie_big_nohaplotig	CDS	133426892	133427104	.	-	1	Parent=comp162180_c4_seq1.mrna1;Target=comp162180_c4_seq1 2063 2275 .
Chr2	stalkie_big_nohaplotig	CDS	133427311	133427485	.	-	2	Parent=comp162180_c4_seq1.mrna1;Target=comp162180_c4_seq1 2276 2450 .
Chr2	stalkie_big_nohaplotig	CDS	133427929	133428086	.	-	1	Parent=comp162180_c4_seq1.mrna1;Target=comp162180_c4_seq1 2451 2608 .
Chr2	stalkie_big_nohaplotig	CDS	133433275	133433522	.	-	0	Parent=comp162180_c4_seq1.mrna1;Target=comp162180_c4_seq1 2609 2856 .
Chr2	stalkie_big_nohaplotig	mRNA	133413466	133433579	.	-	.	ID=FBgn0004622.1.mrna1;geneID=FBgn0004622.1.path1;Name=FBgn0004622.1;Dir=sensecoverage=100.0;identity=99.9;matches=1709;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021801
Chr2	stalkie_big_nohaplotig	exon	133413466	133413764	99	-	.	Parent=FBgn0004622.1.mrna1;Target=FBgn0004622.1 1412 1710 +
Chr2	stalkie_big_nohaplotig	exon	133418277	133418342	100	-	.	Parent=FBgn0004622.1.mrna1;Target=FBgn0004622.1 1346 1411 +
Chr2	stalkie_big_nohaplotig	exon	133418428	133418573	100	-	.	Parent=FBgn0004622.1.mrna1;Target=FBgn0004622.1 1200 1345 +
Chr2	stalkie_big_nohaplotig	exon	133421635	133421831	100	-	.	Parent=FBgn0004622.1.mrna1;Target=FBgn0004622.1 1003 1199 +
Chr2	stalkie_big_nohaplotig	exon	133421949	133422099	100	-	.	Parent=FBgn0004622.1.mrna1;Target=FBgn0004622.1 852 1002 +
Chr2	stalkie_big_nohaplotig	exon	133426892	133427104	100	-	.	Parent=FBgn0004622.1.mrna1;Target=FBgn0004622.1 639 851 +
Chr2	stalkie_big_nohaplotig	exon	133427311	133427485	100	-	.	Parent=FBgn0004622.1.mrna1;Target=FBgn0004622.1 464 638 +
Chr2	stalkie_big_nohaplotig	exon	133427929	133428086	100	-	.	Parent=FBgn0004622.1.mrna1;Target=FBgn0004622.1 306 463 +
Chr2	stalkie_big_nohaplotig	exon	133433275	133433579	100	-	.	Parent=FBgn0004622.1.mrna1;Target=FBgn0004622.1 1 305 +
Chr2	stalkie_big_nohaplotig	CDS	133413466	133413764	.	-	2	Parent=FBgn0004622.1.mrna1;Target=FBgn0004622.1 1412 1710 +
Chr2	stalkie_big_nohaplotig	CDS	133418277	133418342	.	-	2	Parent=FBgn0004622.1.mrna1;Target=FBgn0004622.1 1346 1411 +
Chr2	stalkie_big_nohaplotig	CDS	133418428	133418573	.	-	1	Parent=FBgn0004622.1.mrna1;Target=FBgn0004622.1 1200 1345 +
Chr2	stalkie_big_nohaplotig	CDS	133421635	133421831	.	-	0	Parent=FBgn0004622.1.mrna1;Target=FBgn0004622.1 1003 1199 +
Chr2	stalkie_big_nohaplotig	CDS	133421949	133422099	.	-	1	Parent=FBgn0004622.1.mrna1;Target=FBgn0004622.1 852 1002 +
Chr2	stalkie_big_nohaplotig	CDS	133426892	133427104	.	-	1	Parent=FBgn0004622.1.mrna1;Target=FBgn0004622.1 639 851 +
Chr2	stalkie_big_nohaplotig	CDS	133427311	133427485	.	-	2	Parent=FBgn0004622.1.mrna1;Target=FBgn0004622.1 464 638 +
Chr2	stalkie_big_nohaplotig	CDS	133427929	133428086	.	-	1	Parent=FBgn0004622.1.mrna1;Target=FBgn0004622.1 306 463 +
Chr2	stalkie_big_nohaplotig	CDS	133433275	133433579	.	-	0	Parent=FBgn0004622.1.mrna1;Target=FBgn0004622.1 1 305 +
Chr2	stalkie_big_nohaplotig	mRNA	133413747	133416633	.	-	.	ID=comp66866_c0_seq1.mrna1;geneID=comp66866_c0_seq1.path1;Name=comp66866_c0_seq1;Dir=antisensecoverage=99.5;identity=99.8;matches=557;mismatches=1;indels=0;unknowns=0;Target=comp66866_c0_seq1 397 558 .;locus=RLOC_00021801
Chr2	stalkie_big_nohaplotig	exon	133413747	133413764	100	-	.	Parent=comp66866_c0_seq1.mrna1;Target=comp66866_c0_seq1 1 18 -
Chr2	stalkie_big_nohaplotig	exon	133416094	133416633	99	-	.	Parent=comp66866_c0_seq1.mrna1;Target=comp66866_c0_seq1 19 558 -
Chr2	stalkie_big_nohaplotig	CDS	133416472	133416633	.	-	0	Parent=comp66866_c0_seq1.mrna1
Chr2	gffcl	locus	133583169	133583677	.	+	.	ID=RLOC_00021803;geneIDs=comp145561_c1_seq1.path1;transcripts=comp145561_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133583169	133583677	.	+	.	ID=comp145561_c1_seq1.mrna1;geneID=comp145561_c1_seq1.path1;Name=comp145561_c1_seq1;Dir=sensecoverage=100.0;identity=98.2;matches=372;mismatches=1;indels=6;unknowns=0;Target=comp145561_c1_seq1 158 373 +;locus=RLOC_00021803
Chr2	stalkie_big_nohaplotig	exon	133583169	133583206	100	+	.	Parent=comp145561_c1_seq1.mrna1;Target=comp145561_c1_seq1 1 38 +
Chr2	stalkie_big_nohaplotig	exon	133583337	133583677	97	+	.	Parent=comp145561_c1_seq1.mrna1;Target=comp145561_c1_seq1 39 373 +
Chr2	stalkie_big_nohaplotig	CDS	133583456	133583677	.	+	0	Parent=comp145561_c1_seq1.mrna1
Chr2	gffcl	locus	133590542	133591393	.	-	.	ID=RLOC_00021804;geneIDs=comp154960_c0_seq1.path1;transcripts=comp154960_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133590542	133591393	.	-	.	ID=comp154960_c0_seq1.mrna1;geneID=comp154960_c0_seq1.path1;Name=comp154960_c0_seq1;Dir=antisensecoverage=98.4;identity=98.9;matches=791;mismatches=5;indels=4;unknowns=0;Target=comp154960_c0_seq1 113 592 .;locus=RLOC_00021804
Chr2	stalkie_big_nohaplotig	exon	133590542	133591176	99	-	.	Parent=comp154960_c0_seq1.mrna1;Target=comp154960_c0_seq1 5 639 -
Chr2	stalkie_big_nohaplotig	exon	133591233	133591393	96	-	.	Parent=comp154960_c0_seq1.mrna1;Target=comp154960_c0_seq1 640 804 -
Chr2	stalkie_big_nohaplotig	CDS	133590650	133591129	.	-	0	Parent=comp154960_c0_seq1.mrna1
Chr2	gffcl	locus	133594047	133594787	.	-	.	ID=RLOC_00021805;geneIDs=comp153078_c1_seq1.path1;transcripts=comp153078_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133594047	133594787	.	-	.	ID=comp153078_c1_seq1.mrna1;geneID=comp153078_c1_seq1.path1;Name=comp153078_c1_seq1;Dir=indeterminatecoverage=96.0;identity=98.8;matches=733;mismatches=3;indels=6;unknowns=0;Target=comp153078_c1_seq1 737 1 .;CDS_Target=comp153078_c1_seq1 737 603 .;locus=RLOC_00021805
Chr2	stalkie_big_nohaplotig	exon	133594047	133594787	98	-	.	Parent=comp153078_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	133594047	133594181	.	-	0	Parent=comp153078_c1_seq1.mrna1
Chr2	gffcl	locus	133600834	133602116	.	.	.	ID=RLOC_00021806;geneIDs=comp143958_c0_seq1.path1,comp147695_c0_seq1.path1,comp150084_c0_seq1.path1;transcripts=comp143958_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133601249	133601837	.	-	.	ID=comp143958_c0_seq1.mrna1;geneID=comp143958_c0_seq1.path1;Name=comp143958_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=586;mismatches=3;indels=0;unknowns=0;Target=comp143958_c0_seq1 589 1 .;CDS_Target=comp143958_c0_seq1 140 3 .;locus=RLOC_00021806
Chr2	stalkie_big_nohaplotig	exon	133601249	133601837	99	-	.	Parent=comp143958_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	133601698	133601835	.	-	0	Parent=comp143958_c0_seq1.mrna1
Chr2	gffcl	locus	133603188	133603482	.	-	.	ID=RLOC_00021807;geneIDs=comp143161_c0_seq1.path1;transcripts=comp143161_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133603188	133603482	.	-	.	ID=comp143161_c0_seq1.mrna1;geneID=comp143161_c0_seq1.path1;Name=comp143161_c0_seq1;Dir=indeterminatecoverage=96.7;identity=100.0;matches=295;mismatches=0;indels=0;unknowns=0;Target=comp143161_c0_seq1 304 10 .;CDS_Target=comp143161_c0_seq1 64 11 .;locus=RLOC_00021807
Chr2	stalkie_big_nohaplotig	exon	133603188	133603482	100	-	.	Parent=comp143161_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	133603428	133603481	.	-	0	Parent=comp143161_c0_seq1.mrna1
Chr2	gffcl	locus	133645915	133647856	.	+	.	ID=RLOC_00021808;geneIDs=comp154903_c0_seq1.path1;transcripts=comp154903_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133645915	133647856	.	+	.	ID=comp154903_c0_seq1.mrna1;geneID=comp154903_c0_seq1.path1;Name=comp154903_c0_seq1;Dir=indeterminatecoverage=98.6;identity=99.8;matches=1941;mismatches=1;indels=2;unknowns=0;Target=comp154903_c0_seq1 1972 29 .;CDS_Target=comp154903_c0_seq1 65 30 .;locus=RLOC_00021808
Chr2	stalkie_big_nohaplotig	exon	133645915	133647856	99	+	.	Parent=comp154903_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	133645916	133645949	.	+	0	Parent=comp154903_c0_seq1.mrna1
Chr2	gffcl	locus	133648017	133779977	.	+	.	ID=RLOC_00021809;geneIDs=FBgn0038256.1.path1;transcripts=FBgn0038256.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133648017	133779977	.	+	.	ID=FBgn0038256.1.mrna1;geneID=FBgn0038256.1.path1;Name=FBgn0038256.1;Dir=sensecoverage=99.8;identity=99.6;matches=1110;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021809
Chr2	stalkie_big_nohaplotig	exon	133648017	133648155	100	+	.	Parent=FBgn0038256.1.mrna1;Target=FBgn0038256.1 3 141 +
Chr2	stalkie_big_nohaplotig	exon	133672616	133672783	100	+	.	Parent=FBgn0038256.1.mrna1;Target=FBgn0038256.1 142 309 +
Chr2	stalkie_big_nohaplotig	exon	133676783	133676887	100	+	.	Parent=FBgn0038256.1.mrna1;Target=FBgn0038256.1 310 414 +
Chr2	stalkie_big_nohaplotig	exon	133779046	133779330	98	+	.	Parent=FBgn0038256.1.mrna1;Target=FBgn0038256.1 415 699 +
Chr2	stalkie_big_nohaplotig	exon	133779396	133779584	100	+	.	Parent=FBgn0038256.1.mrna1;Target=FBgn0038256.1 700 888 +
Chr2	stalkie_big_nohaplotig	exon	133779683	133779854	100	+	.	Parent=FBgn0038256.1.mrna1;Target=FBgn0038256.1 889 1060 +
Chr2	stalkie_big_nohaplotig	exon	133779922	133779977	100	+	.	Parent=FBgn0038256.1.mrna1;Target=FBgn0038256.1 1061 1116 +
Chr2	stalkie_big_nohaplotig	CDS	133648018	133648155	.	+	0	Parent=FBgn0038256.1.mrna1;Target=FBgn0038256.1 4 141 +
Chr2	stalkie_big_nohaplotig	CDS	133672616	133672783	.	+	0	Parent=FBgn0038256.1.mrna1;Target=FBgn0038256.1 142 309 +
Chr2	stalkie_big_nohaplotig	CDS	133676783	133676887	.	+	0	Parent=FBgn0038256.1.mrna1;Target=FBgn0038256.1 310 414 +
Chr2	stalkie_big_nohaplotig	CDS	133779046	133779330	.	+	0	Parent=FBgn0038256.1.mrna1;Target=FBgn0038256.1 415 699 +
Chr2	stalkie_big_nohaplotig	CDS	133779396	133779584	.	+	0	Parent=FBgn0038256.1.mrna1;Target=FBgn0038256.1 700 888 +
Chr2	stalkie_big_nohaplotig	CDS	133779683	133779854	.	+	0	Parent=FBgn0038256.1.mrna1;Target=FBgn0038256.1 889 1060 +
Chr2	stalkie_big_nohaplotig	CDS	133779922	133779977	.	+	2	Parent=FBgn0038256.1.mrna1;Target=FBgn0038256.1 1061 1116 +
Chr2	gffcl	locus	133677609	133677925	.	-	.	ID=RLOC_00021810;geneIDs=comp139967_c2_seq1.path1;transcripts=comp139967_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133677609	133677925	.	-	.	ID=comp139967_c2_seq1.mrna1;geneID=comp139967_c2_seq1.path1;Name=comp139967_c2_seq1;Dir=indeterminatecoverage=73.2;identity=95.0;matches=301;mismatches=16;indels=0;unknowns=0;Target=comp139967_c2_seq1 433 117 .;CDS_Target=comp139967_c2_seq1 429 118 .;locus=RLOC_00021810
Chr2	stalkie_big_nohaplotig	exon	133677609	133677925	94	-	.	Parent=comp139967_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	133677613	133677924	.	-	0	Parent=comp139967_c2_seq1.mrna1
Chr2	gffcl	locus	133685958	133698634	.	-	.	ID=RLOC_00021811;geneIDs=FBgn0011217.2.path1;transcripts=FBgn0011217.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133685958	133698634	.	-	.	ID=FBgn0011217.2.mrna1;geneID=FBgn0011217.2.path1;Name=FBgn0011217.2;Dir=sensecoverage=100.0;identity=99.8;matches=455;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021811
Chr2	stalkie_big_nohaplotig	exon	133685958	133686094	100	-	.	Parent=FBgn0011217.2.mrna1;Target=FBgn0011217.2 320 456 +
Chr2	stalkie_big_nohaplotig	exon	133686171	133686354	99	-	.	Parent=FBgn0011217.2.mrna1;Target=FBgn0011217.2 136 319 +
Chr2	stalkie_big_nohaplotig	exon	133688302	133688333	100	-	.	Parent=FBgn0011217.2.mrna1;Target=FBgn0011217.2 104 135 +
Chr2	stalkie_big_nohaplotig	exon	133692027	133692090	100	-	.	Parent=FBgn0011217.2.mrna1;Target=FBgn0011217.2 40 103 +
Chr2	stalkie_big_nohaplotig	exon	133698596	133698634	100	-	.	Parent=FBgn0011217.2.mrna1;Target=FBgn0011217.2 1 39 +
Chr2	stalkie_big_nohaplotig	CDS	133685958	133686094	.	-	2	Parent=FBgn0011217.2.mrna1;Target=FBgn0011217.2 320 456 +
Chr2	stalkie_big_nohaplotig	CDS	133686171	133686354	.	-	0	Parent=FBgn0011217.2.mrna1;Target=FBgn0011217.2 136 319 +
Chr2	stalkie_big_nohaplotig	CDS	133688302	133688333	.	-	2	Parent=FBgn0011217.2.mrna1;Target=FBgn0011217.2 104 135 +
Chr2	stalkie_big_nohaplotig	CDS	133692027	133692090	.	-	0	Parent=FBgn0011217.2.mrna1;Target=FBgn0011217.2 40 103 +
Chr2	stalkie_big_nohaplotig	CDS	133698596	133698634	.	-	0	Parent=FBgn0011217.2.mrna1;Target=FBgn0011217.2 1 39 +
Chr2	gffcl	locus	133769476	133770045	.	-	.	ID=RLOC_00021812;geneIDs=comp146621_c0_seq1.path1;transcripts=comp146621_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133769476	133770045	.	-	.	ID=comp146621_c0_seq1.mrna1;geneID=comp146621_c0_seq1.path1;Name=comp146621_c0_seq1;Dir=indeterminatecoverage=96.1;identity=99.7;matches=570;mismatches=0;indels=2;unknowns=0;Target=comp146621_c0_seq1 572 1 .;CDS_Target=comp146621_c0_seq1 552 424 .;locus=RLOC_00021812
Chr2	stalkie_big_nohaplotig	exon	133769476	133770045	99	-	.	Parent=comp146621_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	133769496	133769624	.	-	0	Parent=comp146621_c0_seq1.mrna1
Chr2	gffcl	locus	133831008	133944800	.	-	.	ID=RLOC_00021813;geneIDs=FBgn0020912.1.path1;transcripts=FBgn0020912.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133831008	133944800	.	-	.	ID=FBgn0020912.1.mrna1;geneID=FBgn0020912.1.path1;Name=FBgn0020912.1;Dir=sensecoverage=100.0;identity=99.8;matches=1640;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021813
Chr2	stalkie_big_nohaplotig	exon	133831008	133831586	99	-	.	Parent=FBgn0020912.1.mrna1;Target=FBgn0020912.1 1066 1644 +
Chr2	stalkie_big_nohaplotig	exon	133914158	133914411	100	-	.	Parent=FBgn0020912.1.mrna1;Target=FBgn0020912.1 812 1065 +
Chr2	stalkie_big_nohaplotig	exon	133919931	133920086	100	-	.	Parent=FBgn0020912.1.mrna1;Target=FBgn0020912.1 656 811 +
Chr2	stalkie_big_nohaplotig	exon	133944146	133944800	99	-	.	Parent=FBgn0020912.1.mrna1;Target=FBgn0020912.1 1 655 +
Chr2	stalkie_big_nohaplotig	CDS	133831008	133831586	.	-	0	Parent=FBgn0020912.1.mrna1;Target=FBgn0020912.1 1066 1644 +
Chr2	stalkie_big_nohaplotig	CDS	133914158	133914411	.	-	2	Parent=FBgn0020912.1.mrna1;Target=FBgn0020912.1 812 1065 +
Chr2	stalkie_big_nohaplotig	CDS	133919931	133920086	.	-	2	Parent=FBgn0020912.1.mrna1;Target=FBgn0020912.1 656 811 +
Chr2	stalkie_big_nohaplotig	CDS	133944146	133944800	.	-	0	Parent=FBgn0020912.1.mrna1;Target=FBgn0020912.1 1 655 +
Chr2	gffcl	locus	133854957	133855283	.	-	.	ID=RLOC_00021814;geneIDs=comp141889_c0_seq1.path1;transcripts=comp141889_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133854957	133855283	.	-	.	ID=comp141889_c0_seq1.mrna1;geneID=comp141889_c0_seq1.path1;Name=comp141889_c0_seq1;Dir=indeterminatecoverage=98.2;identity=98.5;matches=322;mismatches=5;indels=0;unknowns=0;Target=comp141889_c0_seq1 333 7 .;CDS_Target=comp141889_c0_seq1 264 211 .;locus=RLOC_00021814
Chr2	stalkie_big_nohaplotig	exon	133854957	133855283	98	-	.	Parent=comp141889_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	133855026	133855079	.	-	0	Parent=comp141889_c0_seq1.mrna1
Chr2	gffcl	locus	133855297	133855795	.	-	.	ID=RLOC_00021815;geneIDs=comp141865_c0_seq1.path1;transcripts=comp141865_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133855297	133855795	.	-	.	ID=comp141865_c0_seq1.mrna1;geneID=comp141865_c0_seq1.path1;Name=comp141865_c0_seq1;Dir=indeterminatecoverage=97.5;identity=98.8;matches=494;mismatches=2;indels=4;unknowns=0;Target=comp141865_c0_seq1 499 3 .;CDS_Target=comp141865_c0_seq1 225 4 .;locus=RLOC_00021815
Chr2	stalkie_big_nohaplotig	exon	133855297	133855795	98	-	.	Parent=comp141865_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	133855573	133855794	.	-	0	Parent=comp141865_c0_seq1.mrna1
Chr2	gffcl	locus	133946871	133955020	.	+	.	ID=RLOC_00021816;geneIDs=FBgn0015032.1.path1;transcripts=FBgn0015032.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	133946871	133955020	.	+	.	ID=FBgn0015032.1.mrna1;geneID=FBgn0015032.1.path1;Name=FBgn0015032.1;Dir=sensecoverage=69.9;identity=99.1;matches=1126;mismatches=10;indels=0;unknowns=0;locus=RLOC_00021816
Chr2	stalkie_big_nohaplotig	exon	133946871	133947032	100	+	.	Parent=FBgn0015032.1.mrna1;Target=FBgn0015032.1 491 652 +
Chr2	stalkie_big_nohaplotig	exon	133948610	133948679	100	+	.	Parent=FBgn0015032.1.mrna1;Target=FBgn0015032.1 653 722 +
Chr2	stalkie_big_nohaplotig	exon	133954050	133954615	99	+	.	Parent=FBgn0015032.1.mrna1;Target=FBgn0015032.1 723 1288 +
Chr2	stalkie_big_nohaplotig	exon	133954683	133955020	98	+	.	Parent=FBgn0015032.1.mrna1;Target=FBgn0015032.1 1289 1626 +
Chr2	stalkie_big_nohaplotig	CDS	133946873	133947032	.	+	0	Parent=FBgn0015032.1.mrna1;Target=FBgn0015032.1 493 652 +
Chr2	stalkie_big_nohaplotig	CDS	133948610	133948679	.	+	2	Parent=FBgn0015032.1.mrna1;Target=FBgn0015032.1 653 722 +
Chr2	stalkie_big_nohaplotig	CDS	133954050	133954615	.	+	1	Parent=FBgn0015032.1.mrna1;Target=FBgn0015032.1 723 1288 +
Chr2	stalkie_big_nohaplotig	CDS	133954683	133955020	.	+	2	Parent=FBgn0015032.1.mrna1;Target=FBgn0015032.1 1289 1626 +
Chr2	stalkie_big_nohaplotig	mRNA	134100439	134106171	.	-	.	ID=ORF5.mrna1;geneID=ORF5.path1;Name=ORF5;Dir=indeterminatecoverage=100.0;identity=99.0;matches=5710;mismatches=23;indels=36;unknowns=0;Target=ORF5 5769 1 .;locus=RLOC_00021817
Chr2	stalkie_big_nohaplotig	exon	134100439	134106171	98	-	.	Parent=ORF5.mrna1
Chr2	stalkie_big_nohaplotig	CDS	134100439	134106171	.	-	0	Parent=ORF5.mrna1
Chr2	gffcl	locus	134027277	134041884	.	+	.	ID=RLOC_00021818;geneIDs=FBgn0000416.1.path1;transcripts=FBgn0000416.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134027277	134041884	.	+	.	ID=FBgn0000416.1.mrna1;geneID=FBgn0000416.1.path1;Name=FBgn0000416.1;Dir=sensecoverage=99.9;identity=99.6;matches=2886;mismatches=13;indels=0;unknowns=0;locus=RLOC_00021818
Chr2	stalkie_big_nohaplotig	exon	134027277	134027331	100	+	.	Parent=FBgn0000416.1.mrna1;Target=FBgn0000416.1 1 55 +
Chr2	stalkie_big_nohaplotig	exon	134027470	134027551	100	+	.	Parent=FBgn0000416.1.mrna1;Target=FBgn0000416.1 56 137 +
Chr2	stalkie_big_nohaplotig	exon	134036660	134036942	100	+	.	Parent=FBgn0000416.1.mrna1;Target=FBgn0000416.1 138 420 +
Chr2	stalkie_big_nohaplotig	exon	134037016	134037978	99	+	.	Parent=FBgn0000416.1.mrna1;Target=FBgn0000416.1 421 1383 +
Chr2	stalkie_big_nohaplotig	exon	134038061	134038357	99	+	.	Parent=FBgn0000416.1.mrna1;Target=FBgn0000416.1 1384 1680 +
Chr2	stalkie_big_nohaplotig	exon	134038419	134038656	98	+	.	Parent=FBgn0000416.1.mrna1;Target=FBgn0000416.1 1681 1918 +
Chr2	stalkie_big_nohaplotig	exon	134039623	134039765	99	+	.	Parent=FBgn0000416.1.mrna1;Target=FBgn0000416.1 1919 2061 +
Chr2	stalkie_big_nohaplotig	exon	134039829	134040009	100	+	.	Parent=FBgn0000416.1.mrna1;Target=FBgn0000416.1 2062 2242 +
Chr2	stalkie_big_nohaplotig	exon	134040072	134040440	99	+	.	Parent=FBgn0000416.1.mrna1;Target=FBgn0000416.1 2243 2611 +
Chr2	stalkie_big_nohaplotig	exon	134040503	134040648	100	+	.	Parent=FBgn0000416.1.mrna1;Target=FBgn0000416.1 2612 2757 +
Chr2	stalkie_big_nohaplotig	exon	134041743	134041884	100	+	.	Parent=FBgn0000416.1.mrna1;Target=FBgn0000416.1 2758 2899 +
Chr2	stalkie_big_nohaplotig	CDS	134027277	134027331	.	+	0	Parent=FBgn0000416.1.mrna1;Target=FBgn0000416.1 1 55 +
Chr2	stalkie_big_nohaplotig	CDS	134027470	134027551	.	+	2	Parent=FBgn0000416.1.mrna1;Target=FBgn0000416.1 56 137 +
Chr2	stalkie_big_nohaplotig	CDS	134036660	134036942	.	+	1	Parent=FBgn0000416.1.mrna1;Target=FBgn0000416.1 138 420 +
Chr2	stalkie_big_nohaplotig	CDS	134037016	134037978	.	+	0	Parent=FBgn0000416.1.mrna1;Target=FBgn0000416.1 421 1383 +
Chr2	stalkie_big_nohaplotig	CDS	134038061	134038357	.	+	0	Parent=FBgn0000416.1.mrna1;Target=FBgn0000416.1 1384 1680 +
Chr2	stalkie_big_nohaplotig	CDS	134038419	134038656	.	+	0	Parent=FBgn0000416.1.mrna1;Target=FBgn0000416.1 1681 1918 +
Chr2	stalkie_big_nohaplotig	CDS	134039623	134039765	.	+	2	Parent=FBgn0000416.1.mrna1;Target=FBgn0000416.1 1919 2061 +
Chr2	stalkie_big_nohaplotig	CDS	134039829	134040009	.	+	0	Parent=FBgn0000416.1.mrna1;Target=FBgn0000416.1 2062 2242 +
Chr2	stalkie_big_nohaplotig	CDS	134040072	134040440	.	+	2	Parent=FBgn0000416.1.mrna1;Target=FBgn0000416.1 2243 2611 +
Chr2	stalkie_big_nohaplotig	CDS	134040503	134040648	.	+	2	Parent=FBgn0000416.1.mrna1;Target=FBgn0000416.1 2612 2757 +
Chr2	stalkie_big_nohaplotig	CDS	134041743	134041883	.	+	0	Parent=FBgn0000416.1.mrna1;Target=FBgn0000416.1 2758 2898 +
Chr2	gffcl	locus	134038633	134039654	.	-	.	ID=RLOC_00021819;geneIDs=comp155062_c0_seq1.path1;transcripts=comp155062_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134038633	134039654	.	-	.	ID=comp155062_c0_seq1.mrna1;geneID=comp155062_c0_seq1.path1;Name=comp155062_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=937;mismatches=30;indels=0;unknowns=0;Target=comp155062_c0_seq1 610 503 .;locus=RLOC_00021819
Chr2	stalkie_big_nohaplotig	exon	134038633	134039302	97	-	.	Parent=comp155062_c0_seq1.mrna1;Target=comp155062_c0_seq1 967 298 .
Chr2	stalkie_big_nohaplotig	exon	134039358	134039654	96	-	.	Parent=comp155062_c0_seq1.mrna1;Target=comp155062_c0_seq1 297 1 .
Chr2	stalkie_big_nohaplotig	CDS	134038990	134039097	.	-	0	Parent=comp155062_c0_seq1.mrna1
Chr2	gffcl	locus	134040677	134041602	.	-	.	ID=RLOC_00021820;geneIDs=comp157540_c0_seq1.path1;transcripts=comp157540_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134040677	134041602	.	-	.	ID=comp157540_c0_seq1.mrna1;geneID=comp157540_c0_seq1.path1;Name=comp157540_c0_seq1;Dir=indeterminatecoverage=98.1;identity=99.6;matches=923;mismatches=3;indels=1;unknowns=0;Target=comp157540_c0_seq1 945 19 .;CDS_Target=comp157540_c0_seq1 626 432 .;locus=RLOC_00021820
Chr2	stalkie_big_nohaplotig	exon	134040677	134041602	99	-	.	Parent=comp157540_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	134040995	134041189	.	-	0	Parent=comp157540_c0_seq1.mrna1
Chr2	gffcl	locus	134042675	134045606	.	+	.	ID=RLOC_00021821;geneIDs=FBgn0039809.1.path1;transcripts=FBgn0039809.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134042675	134045606	.	+	.	ID=FBgn0039809.1.mrna1;geneID=FBgn0039809.1.path1;Name=FBgn0039809.1;Dir=sensecoverage=100.0;identity=99.7;matches=1283;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021821
Chr2	stalkie_big_nohaplotig	exon	134042675	134042949	100	+	.	Parent=FBgn0039809.1.mrna1;Target=FBgn0039809.1 1 275 +
Chr2	stalkie_big_nohaplotig	exon	134044348	134044436	100	+	.	Parent=FBgn0039809.1.mrna1;Target=FBgn0039809.1 276 364 +
Chr2	stalkie_big_nohaplotig	exon	134044684	134045606	99	+	.	Parent=FBgn0039809.1.mrna1;Target=FBgn0039809.1 365 1287 +
Chr2	stalkie_big_nohaplotig	CDS	134042675	134042949	.	+	0	Parent=FBgn0039809.1.mrna1;Target=FBgn0039809.1 1 275 +
Chr2	stalkie_big_nohaplotig	CDS	134044348	134044436	.	+	1	Parent=FBgn0039809.1.mrna1;Target=FBgn0039809.1 276 364 +
Chr2	stalkie_big_nohaplotig	CDS	134044684	134045606	.	+	2	Parent=FBgn0039809.1.mrna1;Target=FBgn0039809.1 365 1287 +
Chr2	gffcl	locus	134047573	134048759	.	-	.	ID=RLOC_00021822;geneIDs=CPIJ007192.1.path1;transcripts=CPIJ007192.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134047573	134048759	.	-	.	ID=CPIJ007192.1.mrna1;geneID=CPIJ007192.1.path1;Name=CPIJ007192.1;Dir=sensecoverage=99.6;identity=99.4;matches=1114;mismatches=6;indels=1;unknowns=0;locus=RLOC_00021822
Chr2	stalkie_big_nohaplotig	exon	134047573	134048299	99	-	.	Parent=CPIJ007192.1.mrna1;Target=CPIJ007192.1 398 1125 +
Chr2	stalkie_big_nohaplotig	exon	134048367	134048759	99	-	.	Parent=CPIJ007192.1.mrna1;Target=CPIJ007192.1 5 397 +
Chr2	stalkie_big_nohaplotig	CDS	134047573	134048299	.	-	2	Parent=CPIJ007192.1.mrna1;Target=CPIJ007192.1 398 1125 +
Chr2	stalkie_big_nohaplotig	CDS	134048367	134048757	.	-	0	Parent=CPIJ007192.1.mrna1;Target=CPIJ007192.1 7 397 +
Chr2	gffcl	locus	134057005	134061303	.	+	.	ID=RLOC_00021823;geneIDs=comp159429_c0_seq1.path1;transcripts=comp159429_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134057005	134061303	.	+	.	ID=comp159429_c0_seq1.mrna1;geneID=comp159429_c0_seq1.path1;Name=comp159429_c0_seq1;Dir=sensecoverage=100.0;identity=99.2;matches=2458;mismatches=5;indels=16;unknowns=0;Target=comp159429_c0_seq1 2023 2373 +;locus=RLOC_00021823
Chr2	stalkie_big_nohaplotig	exon	134057005	134058175	98	+	.	Parent=comp159429_c0_seq1.mrna1;Target=comp159429_c0_seq1 1 1187 +
Chr2	stalkie_big_nohaplotig	exon	134060012	134061303	100	+	.	Parent=comp159429_c0_seq1.mrna1;Target=comp159429_c0_seq1 1188 2479 +
Chr2	stalkie_big_nohaplotig	CDS	134060847	134061197	.	+	0	Parent=comp159429_c0_seq1.mrna1
Chr2	gffcl	locus	134063793	134064552	.	+	.	ID=RLOC_00021824;geneIDs=comp147475_c0_seq1.path1;transcripts=comp147475_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134063793	134064552	.	+	.	ID=comp147475_c0_seq1.mrna1;geneID=comp147475_c0_seq1.path1;Name=comp147475_c0_seq1;Dir=sensecoverage=99.7;identity=99.3;matches=568;mismatches=4;indels=0;unknowns=0;Target=comp147475_c0_seq1 1 96 +;locus=RLOC_00021824
Chr2	stalkie_big_nohaplotig	exon	134063793	134063991	100	+	.	Parent=comp147475_c0_seq1.mrna1;Target=comp147475_c0_seq1 1 199 +
Chr2	stalkie_big_nohaplotig	exon	134064180	134064552	98	+	.	Parent=comp147475_c0_seq1.mrna1;Target=comp147475_c0_seq1 200 572 +
Chr2	stalkie_big_nohaplotig	CDS	134063793	134063888	.	+	0	Parent=comp147475_c0_seq1.mrna1
Chr2	gffcl	locus	134066825	134071497	.	-	.	ID=RLOC_00021825;geneIDs=ORF395.path1,FBgn0040011.1.path1;transcripts=FBgn0040011.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134068689	134071497	.	-	.	ID=FBgn0040011.1.mrna1;geneID=FBgn0040011.1.path1;Name=FBgn0040011.1;Dir=sensecoverage=91.8;identity=99.8;matches=2059;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021825
Chr2	stalkie_big_nohaplotig	exon	134068689	134070710	99	-	.	Parent=FBgn0040011.1.mrna1;Target=FBgn0040011.1 42 2063 +
Chr2	stalkie_big_nohaplotig	exon	134071457	134071497	100	-	.	Parent=FBgn0040011.1.mrna1;Target=FBgn0040011.1 1 41 +
Chr2	stalkie_big_nohaplotig	CDS	134068691	134070710	.	-	1	Parent=FBgn0040011.1.mrna1;Target=FBgn0040011.1 42 2061 +
Chr2	stalkie_big_nohaplotig	CDS	134071457	134071497	.	-	0	Parent=FBgn0040011.1.mrna1;Target=FBgn0040011.1 1 41 +
Chr2	gffcl	locus	134073721	134080789	.	+	.	ID=RLOC_00021826;geneIDs=FBgn0039808.path1,Dv_FBgn0210079.1.path1;transcripts=Dv_FBgn0210079.1.mrna1,FBgn0039808.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134073721	134079737	.	+	.	ID=Dv_FBgn0210079.1.mrna1;geneID=Dv_FBgn0210079.1.path1;Name=Dv_FBgn0210079.1;Dir=sensecoverage=100.0;identity=99.7;matches=640;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021826
Chr2	stalkie_big_nohaplotig	exon	134073721	134074074	100	+	.	Parent=Dv_FBgn0210079.1.mrna1;Target=Dv_FBgn0210079.1 1 354 +
Chr2	stalkie_big_nohaplotig	exon	134074321	134074479	98	+	.	Parent=Dv_FBgn0210079.1.mrna1;Target=Dv_FBgn0210079.1 355 513 +
Chr2	stalkie_big_nohaplotig	exon	134079609	134079737	100	+	.	Parent=Dv_FBgn0210079.1.mrna1;Target=Dv_FBgn0210079.1 514 642 +
Chr2	stalkie_big_nohaplotig	CDS	134073721	134074074	.	+	0	Parent=Dv_FBgn0210079.1.mrna1;Target=Dv_FBgn0210079.1 1 354 +
Chr2	stalkie_big_nohaplotig	CDS	134074321	134074479	.	+	0	Parent=Dv_FBgn0210079.1.mrna1;Target=Dv_FBgn0210079.1 355 513 +
Chr2	stalkie_big_nohaplotig	CDS	134079609	134079737	.	+	0	Parent=Dv_FBgn0210079.1.mrna1;Target=Dv_FBgn0210079.1 514 642 +
Chr2	stalkie_big_nohaplotig	mRNA	134079720	134080789	.	+	.	ID=FBgn0039808.mrna1;geneID=FBgn0039808.path1;Name=FBgn0039808;Dir=sensecoverage=99.7;identity=99.9;matches=905;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021826
Chr2	stalkie_big_nohaplotig	exon	134079720	134080146	99	+	.	Parent=FBgn0039808.mrna1;Target=FBgn0039808 1 427 +
Chr2	stalkie_big_nohaplotig	exon	134080224	134080333	100	+	.	Parent=FBgn0039808.mrna1;Target=FBgn0039808 428 537 +
Chr2	stalkie_big_nohaplotig	exon	134080421	134080789	100	+	.	Parent=FBgn0039808.mrna1;Target=FBgn0039808 538 906 +
Chr2	stalkie_big_nohaplotig	CDS	134079720	134080146	.	+	0	Parent=FBgn0039808.mrna1;Target=FBgn0039808 1 427 +
Chr2	stalkie_big_nohaplotig	CDS	134080224	134080333	.	+	2	Parent=FBgn0039808.mrna1;Target=FBgn0039808 428 537 +
Chr2	stalkie_big_nohaplotig	CDS	134080421	134080789	.	+	0	Parent=FBgn0039808.mrna1;Target=FBgn0039808 538 906 +
Chr2	gffcl	locus	134089412	134090650	.	+	.	ID=RLOC_00021827;geneIDs=comp162079_c0_seq1.path1;transcripts=comp162079_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134089412	134090650	.	+	.	ID=comp162079_c0_seq1.mrna1;geneID=comp162079_c0_seq1.path1;Name=comp162079_c0_seq1;Dir=indeterminatecoverage=97.6;identity=93.5;matches=1179;mismatches=42;indels=40;unknowns=0;Target=comp162079_c0_seq1 1243 1 .;CDS_Target=comp162079_c0_seq1 1049 1026 .;locus=RLOC_00021827
Chr2	stalkie_big_nohaplotig	exon	134089412	134090650	93	+	.	Parent=comp162079_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	134090430	134090452	.	+	0	Parent=comp162079_c0_seq1.mrna1
Chr2	gffcl	locus	134091673	134091755	.	-	.	ID=RLOC_00021828;geneIDs=comp151277_c0_seq1.path2;transcripts=comp151277_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	134091673	134091755	.	-	.	ID=comp151277_c0_seq1.mrna2;geneID=comp151277_c0_seq1.path2;Name=comp151277_c0_seq1;Dir=indeterminatecoverage=24.6;identity=96.4;matches=80;mismatches=3;indels=0;unknowns=0;Target=comp151277_c0_seq1 338 256 .;CDS_Target=comp151277_c0_seq1 298 256 .;locus=RLOC_00021828
Chr2	stalkie_big_nohaplotig	exon	134091673	134091755	96	-	.	Parent=comp151277_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	134091713	134091755	.	-	2	Parent=comp151277_c0_seq1.mrna2
Chr2	gffcl	locus	134092448	134093120	.	+	.	ID=RLOC_00021829;geneIDs=comp115621_c0_seq1.path1;transcripts=comp115621_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134092448	134093120	.	+	.	ID=comp115621_c0_seq1.mrna1;geneID=comp115621_c0_seq1.path1;Name=comp115621_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=673;mismatches=0;indels=0;unknowns=0;Target=comp115621_c0_seq1 673 1 .;CDS_Target=comp115621_c0_seq1 455 357 .;locus=RLOC_00021829
Chr2	stalkie_big_nohaplotig	exon	134092448	134093120	100	+	.	Parent=comp115621_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	134092804	134092902	.	+	0	Parent=comp115621_c0_seq1.mrna1
Chr2	gffcl	locus	134095979	134097763	.	+	.	ID=RLOC_00021830;geneIDs=FBgn0039807.1.path1;transcripts=FBgn0039807.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134095979	134097763	.	+	.	ID=FBgn0039807.1.mrna1;geneID=FBgn0039807.1.path1;Name=FBgn0039807.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1779;mismatches=6;indels=0;unknowns=0;Target=FBgn0039807.1 1785 1 .;locus=RLOC_00021830
Chr2	stalkie_big_nohaplotig	exon	134095979	134097763	99	+	.	Parent=FBgn0039807.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	134095979	134097763	.	+	0	Parent=FBgn0039807.1.mrna1
Chr2	gffcl	locus	134154918	134155978	.	+	.	ID=RLOC_00021831;geneIDs=FBgn0051076.1.path1;transcripts=FBgn0051076.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134154918	134155978	.	+	.	ID=FBgn0051076.1.mrna1;geneID=FBgn0051076.1.path1;Name=FBgn0051076.1;Dir=sensecoverage=99.5;identity=99.1;matches=763;mismatches=7;indels=0;unknowns=0;locus=RLOC_00021831
Chr2	stalkie_big_nohaplotig	exon	134154918	134155001	100	+	.	Parent=FBgn0051076.1.mrna1;Target=FBgn0051076.1 1 84 +
Chr2	stalkie_big_nohaplotig	exon	134155111	134155347	99	+	.	Parent=FBgn0051076.1.mrna1;Target=FBgn0051076.1 85 321 +
Chr2	stalkie_big_nohaplotig	exon	134155411	134155559	98	+	.	Parent=FBgn0051076.1.mrna1;Target=FBgn0051076.1 322 470 +
Chr2	stalkie_big_nohaplotig	exon	134155618	134155832	99	+	.	Parent=FBgn0051076.1.mrna1;Target=FBgn0051076.1 471 685 +
Chr2	stalkie_big_nohaplotig	exon	134155894	134155978	97	+	.	Parent=FBgn0051076.1.mrna1;Target=FBgn0051076.1 686 770 +
Chr2	stalkie_big_nohaplotig	CDS	134154918	134155001	.	+	0	Parent=FBgn0051076.1.mrna1;Target=FBgn0051076.1 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	134155111	134155347	.	+	0	Parent=FBgn0051076.1.mrna1;Target=FBgn0051076.1 85 321 +
Chr2	stalkie_big_nohaplotig	CDS	134155411	134155559	.	+	0	Parent=FBgn0051076.1.mrna1;Target=FBgn0051076.1 322 470 +
Chr2	stalkie_big_nohaplotig	CDS	134155618	134155832	.	+	1	Parent=FBgn0051076.1.mrna1;Target=FBgn0051076.1 471 685 +
Chr2	stalkie_big_nohaplotig	CDS	134155894	134155976	.	+	2	Parent=FBgn0051076.1.mrna1;Target=FBgn0051076.1 686 768 +
Chr2	gffcl	locus	134167593	134174047	.	+	.	ID=RLOC_00021833;geneIDs=FBgn0051075.1.path1;transcripts=FBgn0051075.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134167593	134174047	.	+	.	ID=FBgn0051075.1.mrna1;geneID=FBgn0051075.1.path1;Name=FBgn0051075.1;Dir=sensecoverage=100.0;identity=99.5;matches=1185;mismatches=1;indels=5;unknowns=0;locus=RLOC_00021833
Chr2	stalkie_big_nohaplotig	exon	134167593	134167626	86	+	.	Parent=FBgn0051075.1.mrna1;Target=FBgn0051075.1 1 38 +
Chr2	stalkie_big_nohaplotig	exon	134167693	134167801	100	+	.	Parent=FBgn0051075.1.mrna1;Target=FBgn0051075.1 39 147 +
Chr2	stalkie_big_nohaplotig	exon	134172478	134172683	100	+	.	Parent=FBgn0051075.1.mrna1;Target=FBgn0051075.1 148 353 +
Chr2	stalkie_big_nohaplotig	exon	134172759	134173330	100	+	.	Parent=FBgn0051075.1.mrna1;Target=FBgn0051075.1 354 925 +
Chr2	stalkie_big_nohaplotig	exon	134173783	134174047	99	+	.	Parent=FBgn0051075.1.mrna1;Target=FBgn0051075.1 926 1191 +
Chr2	stalkie_big_nohaplotig	CDS	134167772	134167801	.	+	0	Parent=FBgn0051075.1.mrna1;Target=FBgn0051075.1 118 147 +
Chr2	stalkie_big_nohaplotig	CDS	134172478	134172683	.	+	0	Parent=FBgn0051075.1.mrna1;Target=FBgn0051075.1 148 353 +
Chr2	stalkie_big_nohaplotig	CDS	134172759	134173330	.	+	1	Parent=FBgn0051075.1.mrna1;Target=FBgn0051075.1 354 925 +
Chr2	stalkie_big_nohaplotig	CDS	134173783	134174047	.	+	2	Parent=FBgn0051075.1.mrna1;Target=FBgn0051075.1 926 1191 +
Chr2	gffcl	locus	134188700	134188912	.	+	.	ID=RLOC_00021834;geneIDs=comp151528_c0_seq1.path1;transcripts=comp151528_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134188700	134188912	.	+	.	ID=comp151528_c0_seq1.mrna1;geneID=comp151528_c0_seq1.path1;Name=comp151528_c0_seq1;Dir=indeterminatecoverage=97.3;identity=96.4;matches=212;mismatches=1;indels=7;unknowns=0;Target=comp151528_c0_seq1 222 3 .;CDS_Target=comp151528_c0_seq1 56 3 .;locus=RLOC_00021834
Chr2	stalkie_big_nohaplotig	exon	134188700	134188912	96	+	.	Parent=comp151528_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	134188700	134188751	.	+	0	Parent=comp151528_c0_seq1.mrna1
Chr2	gffcl	locus	134193329	134194160	.	-	.	ID=RLOC_00021835;geneIDs=ORF3124.path1;transcripts=ORF3124.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134193329	134194160	.	-	.	ID=ORF3124.mrna1;geneID=ORF3124.path1;Name=ORF3124;Dir=sensecoverage=100.0;identity=99.6;matches=762;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021835
Chr2	stalkie_big_nohaplotig	exon	134193329	134194005	99	-	.	Parent=ORF3124.mrna1;Target=ORF3124 89 765 +
Chr2	stalkie_big_nohaplotig	exon	134194073	134194160	97	-	.	Parent=ORF3124.mrna1;Target=ORF3124 1 88 +
Chr2	stalkie_big_nohaplotig	CDS	134193329	134194005	.	-	2	Parent=ORF3124.mrna1;Target=ORF3124 89 765 +
Chr2	stalkie_big_nohaplotig	CDS	134194073	134194160	.	-	0	Parent=ORF3124.mrna1;Target=ORF3124 1 88 +
Chr2	gffcl	locus	134195581	134196222	.	+	.	ID=RLOC_00021836;geneIDs=comp117165_c0_seq1.path1;transcripts=comp117165_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134195581	134196222	.	+	.	ID=comp117165_c0_seq1.mrna1;geneID=comp117165_c0_seq1.path1;Name=comp117165_c0_seq1;Dir=indeterminatecoverage=99.7;identity=96.1;matches=617;mismatches=24;indels=1;unknowns=0;Target=comp117165_c0_seq1 641 1 .;CDS_Target=comp117165_c0_seq1 138 1 .;locus=RLOC_00021836
Chr2	stalkie_big_nohaplotig	exon	134195581	134196222	96	+	.	Parent=comp117165_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	134195581	134195718	.	+	0	Parent=comp117165_c0_seq1.mrna1
Chr2	gffcl	locus	134196226	134196818	.	-	.	ID=RLOC_00021837;geneIDs=comp155307_c0_seq1.path1;transcripts=comp155307_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134196226	134196818	.	-	.	ID=comp155307_c0_seq1.mrna1;geneID=comp155307_c0_seq1.path1;Name=comp155307_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=581;mismatches=12;indels=0;unknowns=0;Target=comp155307_c0_seq1 593 1 .;CDS_Target=comp155307_c0_seq1 304 2 .;locus=RLOC_00021837
Chr2	stalkie_big_nohaplotig	exon	134196226	134196818	97	-	.	Parent=comp155307_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	134196515	134196817	.	-	0	Parent=comp155307_c0_seq1.mrna1
Chr2	gffcl	locus	134208727	134226418	.	-	.	ID=RLOC_00021838;geneIDs=FBgn0039466.1.path1;transcripts=FBgn0039466.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134208727	134226418	.	-	.	ID=FBgn0039466.1.mrna1;geneID=FBgn0039466.1.path1;Name=FBgn0039466.1;Dir=sensecoverage=100.0;identity=100.0;matches=6068;mismatches=0;indels=1;unknowns=0;locus=RLOC_00021838
Chr2	stalkie_big_nohaplotig	exon	134208727	134208937	99	-	.	Parent=FBgn0039466.1.mrna1;Target=FBgn0039466.1 5858 6069 +
Chr2	stalkie_big_nohaplotig	exon	134209023	134209213	100	-	.	Parent=FBgn0039466.1.mrna1;Target=FBgn0039466.1 5667 5857 +
Chr2	stalkie_big_nohaplotig	exon	134209642	134210651	100	-	.	Parent=FBgn0039466.1.mrna1;Target=FBgn0039466.1 4657 5666 +
Chr2	stalkie_big_nohaplotig	exon	134210716	134214967	100	-	.	Parent=FBgn0039466.1.mrna1;Target=FBgn0039466.1 405 4656 +
Chr2	stalkie_big_nohaplotig	exon	134215037	134215208	100	-	.	Parent=FBgn0039466.1.mrna1;Target=FBgn0039466.1 233 404 +
Chr2	stalkie_big_nohaplotig	exon	134219433	134219543	100	-	.	Parent=FBgn0039466.1.mrna1;Target=FBgn0039466.1 122 232 +
Chr2	stalkie_big_nohaplotig	exon	134226298	134226418	100	-	.	Parent=FBgn0039466.1.mrna1;Target=FBgn0039466.1 1 121 +
Chr2	stalkie_big_nohaplotig	CDS	134208727	134208937	.	-	2	Parent=FBgn0039466.1.mrna1;Target=FBgn0039466.1 5858 6069 +
Chr2	stalkie_big_nohaplotig	CDS	134209023	134209213	.	-	1	Parent=FBgn0039466.1.mrna1;Target=FBgn0039466.1 5667 5857 +
Chr2	stalkie_big_nohaplotig	CDS	134209642	134210651	.	-	0	Parent=FBgn0039466.1.mrna1;Target=FBgn0039466.1 4657 5666 +
Chr2	stalkie_big_nohaplotig	CDS	134210716	134214967	.	-	1	Parent=FBgn0039466.1.mrna1;Target=FBgn0039466.1 405 4656 +
Chr2	stalkie_big_nohaplotig	CDS	134215037	134215208	.	-	2	Parent=FBgn0039466.1.mrna1;Target=FBgn0039466.1 233 404 +
Chr2	stalkie_big_nohaplotig	CDS	134219433	134219543	.	-	2	Parent=FBgn0039466.1.mrna1;Target=FBgn0039466.1 122 232 +
Chr2	stalkie_big_nohaplotig	CDS	134226298	134226418	.	-	0	Parent=FBgn0039466.1.mrna1;Target=FBgn0039466.1 1 121 +
Chr2	gffcl	locus	134231189	134232235	.	+	.	ID=RLOC_00021839;geneIDs=FBgn0037779.1.path1;transcripts=FBgn0037779.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134231189	134232235	.	+	.	ID=FBgn0037779.1.mrna1;geneID=FBgn0037779.1.path1;Name=FBgn0037779.1;Dir=sensecoverage=100.0;identity=99.7;matches=658;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021839
Chr2	stalkie_big_nohaplotig	exon	134231189	134231374	100	+	.	Parent=FBgn0037779.1.mrna1;Target=FBgn0037779.1 1 186 +
Chr2	stalkie_big_nohaplotig	exon	134231677	134231773	100	+	.	Parent=FBgn0037779.1.mrna1;Target=FBgn0037779.1 187 283 +
Chr2	stalkie_big_nohaplotig	exon	134231859	134232235	99	+	.	Parent=FBgn0037779.1.mrna1;Target=FBgn0037779.1 284 660 +
Chr2	stalkie_big_nohaplotig	CDS	134231189	134231374	.	+	0	Parent=FBgn0037779.1.mrna1;Target=FBgn0037779.1 1 186 +
Chr2	stalkie_big_nohaplotig	CDS	134231677	134231773	.	+	0	Parent=FBgn0037779.1.mrna1;Target=FBgn0037779.1 187 283 +
Chr2	stalkie_big_nohaplotig	CDS	134231859	134232235	.	+	2	Parent=FBgn0037779.1.mrna1;Target=FBgn0037779.1 284 660 +
Chr2	gffcl	locus	134233077	134234859	.	-	.	ID=RLOC_00021840;geneIDs=FBgn0037778.1.path1;transcripts=FBgn0037778.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134233077	134234859	.	-	.	ID=FBgn0037778.1.mrna1;geneID=FBgn0037778.1.path1;Name=FBgn0037778.1;Dir=sensecoverage=100.0;identity=100.0;matches=1404;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021840
Chr2	stalkie_big_nohaplotig	exon	134233077	134233506	100	-	.	Parent=FBgn0037778.1.mrna1;Target=FBgn0037778.1 975 1404 +
Chr2	stalkie_big_nohaplotig	exon	134233563	134233717	100	-	.	Parent=FBgn0037778.1.mrna1;Target=FBgn0037778.1 820 974 +
Chr2	stalkie_big_nohaplotig	exon	134233906	134234067	100	-	.	Parent=FBgn0037778.1.mrna1;Target=FBgn0037778.1 658 819 +
Chr2	stalkie_big_nohaplotig	exon	134234131	134234270	100	-	.	Parent=FBgn0037778.1.mrna1;Target=FBgn0037778.1 518 657 +
Chr2	stalkie_big_nohaplotig	exon	134234343	134234859	100	-	.	Parent=FBgn0037778.1.mrna1;Target=FBgn0037778.1 1 517 +
Chr2	stalkie_big_nohaplotig	CDS	134233077	134233506	.	-	1	Parent=FBgn0037778.1.mrna1;Target=FBgn0037778.1 975 1404 +
Chr2	stalkie_big_nohaplotig	CDS	134233563	134233717	.	-	0	Parent=FBgn0037778.1.mrna1;Target=FBgn0037778.1 820 974 +
Chr2	stalkie_big_nohaplotig	CDS	134233906	134234067	.	-	0	Parent=FBgn0037778.1.mrna1;Target=FBgn0037778.1 658 819 +
Chr2	stalkie_big_nohaplotig	CDS	134234131	134234270	.	-	2	Parent=FBgn0037778.1.mrna1;Target=FBgn0037778.1 518 657 +
Chr2	stalkie_big_nohaplotig	CDS	134234343	134234859	.	-	0	Parent=FBgn0037778.1.mrna1;Target=FBgn0037778.1 1 517 +
Chr2	gffcl	locus	134284588	134285522	.	-	.	ID=RLOC_00021841;geneIDs=comp157059_c0_seq1.path1;transcripts=comp157059_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134284588	134285522	.	-	.	ID=comp157059_c0_seq1.mrna1;geneID=comp157059_c0_seq1.path1;Name=comp157059_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=928;mismatches=7;indels=0;unknowns=0;Target=comp157059_c0_seq1 935 1 .;CDS_Target=comp157059_c0_seq1 132 43 .;locus=RLOC_00021841
Chr2	stalkie_big_nohaplotig	exon	134284588	134285522	99	-	.	Parent=comp157059_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	134285391	134285480	.	-	0	Parent=comp157059_c0_seq1.mrna1
Chr2	gffcl	locus	134401172	134435550	.	+	.	ID=RLOC_00021843;geneIDs=comp150875_c0_seq1.path1;transcripts=comp150875_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134401172	134435550	.	+	.	ID=comp150875_c0_seq1.mrna1;geneID=comp150875_c0_seq1.path1;Name=comp150875_c0_seq1;Dir=indeterminatecoverage=83.8;identity=98.7;matches=391;mismatches=5;indels=0;unknowns=0;Target=comp150875_c0_seq1 431 324 .;locus=RLOC_00021843
Chr2	stalkie_big_nohaplotig	exon	134401172	134401177	100	+	.	Parent=comp150875_c0_seq1.mrna1;Target=comp150875_c0_seq1 84 79 .
Chr2	stalkie_big_nohaplotig	exon	134403052	134403057	100	+	.	Parent=comp150875_c0_seq1.mrna1;Target=comp150875_c0_seq1 90 85 .
Chr2	stalkie_big_nohaplotig	exon	134404008	134404019	75	+	.	Parent=comp150875_c0_seq1.mrna1;Target=comp150875_c0_seq1 102 91 .
Chr2	stalkie_big_nohaplotig	exon	134413616	134413623	100	+	.	Parent=comp150875_c0_seq1.mrna1;Target=comp150875_c0_seq1 118 111 .
Chr2	stalkie_big_nohaplotig	exon	134419120	134419121	100	+	.	Parent=comp150875_c0_seq1.mrna1;Target=comp150875_c0_seq1 120 119 .
Chr2	stalkie_big_nohaplotig	exon	134435190	134435550	99	+	.	Parent=comp150875_c0_seq1.mrna1;Target=comp150875_c0_seq1 481 121 .
Chr2	stalkie_big_nohaplotig	CDS	134435393	134435500	.	+	0	Parent=comp150875_c0_seq1.mrna1
Chr2	gffcl	locus	134432895	134437120	.	.	.	ID=RLOC_00021844;geneIDs=FBgn0039805.1.path1,comp151636_c0_seq1.path1;transcripts=FBgn0039805.1.mrna1,comp151636_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134432895	134437120	.	+	.	ID=FBgn0039805.1.mrna1;geneID=FBgn0039805.1.path1;Name=FBgn0039805.1;Dir=sensecoverage=100.0;identity=100.0;matches=738;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021844
Chr2	stalkie_big_nohaplotig	exon	134432895	134432948	100	+	.	Parent=FBgn0039805.1.mrna1;Target=FBgn0039805.1 1 54 +
Chr2	stalkie_big_nohaplotig	exon	134435972	134436219	100	+	.	Parent=FBgn0039805.1.mrna1;Target=FBgn0039805.1 55 302 +
Chr2	stalkie_big_nohaplotig	exon	134436685	134437120	100	+	.	Parent=FBgn0039805.1.mrna1;Target=FBgn0039805.1 303 738 +
Chr2	stalkie_big_nohaplotig	CDS	134432895	134432948	.	+	0	Parent=FBgn0039805.1.mrna1;Target=FBgn0039805.1 1 54 +
Chr2	stalkie_big_nohaplotig	CDS	134435972	134436219	.	+	0	Parent=FBgn0039805.1.mrna1;Target=FBgn0039805.1 55 302 +
Chr2	stalkie_big_nohaplotig	CDS	134436685	134437120	.	+	1	Parent=FBgn0039805.1.mrna1;Target=FBgn0039805.1 303 738 +
Chr2	stalkie_big_nohaplotig	mRNA	134436196	134436706	.	-	.	ID=comp151636_c0_seq1.mrna1;geneID=comp151636_c0_seq1.path1;Name=comp151636_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=503;mismatches=8;indels=0;unknowns=0;Target=comp151636_c0_seq1 511 1 .;CDS_Target=comp151636_c0_seq1 257 255 .;locus=RLOC_00021844
Chr2	stalkie_big_nohaplotig	exon	134436196	134436706	98	-	.	Parent=comp151636_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	134436450	134436452	.	-	0	Parent=comp151636_c0_seq1.mrna1
Chr2	gffcl	locus	134434173	134435024	.	+	.	ID=RLOC_00021845;geneIDs=comp154696_c0_seq1.path1;transcripts=comp154696_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134434173	134435024	.	+	.	ID=comp154696_c0_seq1.mrna1;geneID=comp154696_c0_seq1.path1;Name=comp154696_c0_seq1;Dir=indeterminatecoverage=90.6;identity=97.5;matches=831;mismatches=17;indels=4;unknowns=0;Target=comp154696_c0_seq1 936 89 .;CDS_Target=comp154696_c0_seq1 906 853 .;locus=RLOC_00021845
Chr2	stalkie_big_nohaplotig	exon	134434173	134435024	97	+	.	Parent=comp154696_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	134434937	134434994	.	+	0	Parent=comp154696_c0_seq1.mrna1
Chr2	gffcl	locus	134503969	134504891	.	-	.	ID=RLOC_00021846;geneIDs=comp150419_c1_seq1.path2;transcripts=comp150419_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	134503969	134504891	.	-	.	ID=comp150419_c1_seq1.mrna2;geneID=comp150419_c1_seq1.path2;Name=comp150419_c1_seq1;Dir=sensecoverage=99.8;identity=95.6;matches=852;mismatches=8;indels=31;unknowns=0;Target=comp150419_c1_seq1 293 634 +;locus=RLOC_00021846
Chr2	stalkie_big_nohaplotig	exon	134503969	134504544	93	-	.	Parent=comp150419_c1_seq1.mrna2;Target=comp150419_c1_seq1 286 892 +
Chr2	stalkie_big_nohaplotig	exon	134504608	134504891	100	-	.	Parent=comp150419_c1_seq1.mrna2;Target=comp150419_c1_seq1 2 285 +
Chr2	stalkie_big_nohaplotig	CDS	134504196	134504537	.	-	0	Parent=comp150419_c1_seq1.mrna2
Chr2	gffcl	locus	134548962	134549351	.	-	.	ID=RLOC_00021847;geneIDs=ORF2549.path1;transcripts=ORF2549.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134548962	134549351	.	-	.	ID=ORF2549.mrna1;geneID=ORF2549.path1;Name=ORF2549;Dir=indeterminatecoverage=46.3;identity=99.7;matches=388;mismatches=1;indels=0;unknowns=1;Target=ORF2549 390 1 .;locus=RLOC_00021847
Chr2	stalkie_big_nohaplotig	exon	134548962	134549351	99	-	.	Parent=ORF2549.mrna1
Chr2	stalkie_big_nohaplotig	CDS	134548962	134549351	.	-	0	Parent=ORF2549.mrna1
Chr2	gffcl	locus	134594008	134594385	.	-	.	ID=RLOC_00021848;geneIDs=FBgn0024432.4.path1;transcripts=FBgn0024432.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134594008	134594385	.	-	.	ID=FBgn0024432.4.mrna1;geneID=FBgn0024432.4.path1;Name=FBgn0024432.4;Dir=sensecoverage=100.0;identity=100.0;matches=321;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021848
Chr2	stalkie_big_nohaplotig	exon	134594008	134594312	100	-	.	Parent=FBgn0024432.4.mrna1;Target=FBgn0024432.4 17 321 +
Chr2	stalkie_big_nohaplotig	exon	134594370	134594385	100	-	.	Parent=FBgn0024432.4.mrna1;Target=FBgn0024432.4 1 16 +
Chr2	stalkie_big_nohaplotig	CDS	134594008	134594312	.	-	2	Parent=FBgn0024432.4.mrna1;Target=FBgn0024432.4 17 321 +
Chr2	stalkie_big_nohaplotig	CDS	134594370	134594385	.	-	0	Parent=FBgn0024432.4.mrna1;Target=FBgn0024432.4 1 16 +
Chr2	gffcl	locus	134624491	134625342	.	+	.	ID=RLOC_00021849;geneIDs=ORF2485.path1;transcripts=ORF2485.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134624491	134625342	.	+	.	ID=ORF2485.mrna1;geneID=ORF2485.path1;Name=ORF2485;Dir=indeterminatecoverage=100.0;identity=99.1;matches=844;mismatches=8;indels=0;unknowns=0;Target=ORF2485 852 1 .;locus=RLOC_00021849
Chr2	stalkie_big_nohaplotig	exon	134624491	134625342	99	+	.	Parent=ORF2485.mrna1
Chr2	stalkie_big_nohaplotig	CDS	134624491	134625342	.	+	0	Parent=ORF2485.mrna1
Chr2	gffcl	locus	134628921	134629373	.	-	.	ID=RLOC_00021850;geneIDs=ORF2549.path2;transcripts=ORF2549.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	134628921	134629373	.	-	.	ID=ORF2549.mrna2;geneID=ORF2549.path2;Name=ORF2549;Dir=indeterminatecoverage=53.7;identity=98.2;matches=445;mismatches=8;indels=0;unknowns=0;Target=ORF2549 843 391 .;locus=RLOC_00021850
Chr2	stalkie_big_nohaplotig	exon	134628921	134629373	98	-	.	Parent=ORF2549.mrna2
Chr2	stalkie_big_nohaplotig	CDS	134628921	134629373	.	-	0	Parent=ORF2549.mrna2
Chr2	gffcl	locus	134682299	134682719	.	+	.	ID=RLOC_00021851;geneIDs=comp135402_c0_seq1.path1;transcripts=comp135402_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134682299	134682719	.	+	.	ID=comp135402_c0_seq1.mrna1;geneID=comp135402_c0_seq1.path1;Name=comp135402_c0_seq1;Dir=sensecoverage=68.5;identity=99.4;matches=339;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021851
Chr2	stalkie_big_nohaplotig	exon	134682299	134682437	100	+	.	Parent=comp135402_c0_seq1.mrna1;Target=comp135402_c0_seq1 157 295 +
Chr2	stalkie_big_nohaplotig	exon	134682518	134682719	99	+	.	Parent=comp135402_c0_seq1.mrna1;Target=comp135402_c0_seq1 296 497 +
Chr2	stalkie_big_nohaplotig	CDS	134682299	134682437	.	+	0	Parent=comp135402_c0_seq1.mrna1;Target=comp135402_c0_seq1 157 295 +
Chr2	stalkie_big_nohaplotig	CDS	134682518	134682687	.	+	2	Parent=comp135402_c0_seq1.mrna1;Target=comp135402_c0_seq1 296 465 +
Chr2	gffcl	locus	134723740	134726776	.	+	.	ID=RLOC_00021852;geneIDs=comp160773_c1_seq1.path1;transcripts=comp160773_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134723740	134726776	.	+	.	ID=comp160773_c1_seq1.mrna1;geneID=comp160773_c1_seq1.path1;Name=comp160773_c1_seq1;Dir=antisensecoverage=100.0;identity=98.5;matches=1233;mismatches=18;indels=1;unknowns=0;locus=RLOC_00021852
Chr2	stalkie_big_nohaplotig	exon	134723740	134724011	96	+	.	Parent=comp160773_c1_seq1.mrna1;Target=comp160773_c1_seq1 981 1252 -
Chr2	stalkie_big_nohaplotig	exon	134725738	134725800	98	+	.	Parent=comp160773_c1_seq1.mrna1;Target=comp160773_c1_seq1 918 980 -
Chr2	stalkie_big_nohaplotig	exon	134725861	134726776	99	+	.	Parent=comp160773_c1_seq1.mrna1;Target=comp160773_c1_seq1 1 917 -
Chr2	stalkie_big_nohaplotig	CDS	134724009	134724011	.	+	0	Parent=comp160773_c1_seq1.mrna1;Target=comp160773_c1_seq1 981 983 .
Chr2	stalkie_big_nohaplotig	CDS	134725738	134725800	.	+	0	Parent=comp160773_c1_seq1.mrna1;Target=comp160773_c1_seq1 918 980 .
Chr2	stalkie_big_nohaplotig	CDS	134725861	134726441	.	+	0	Parent=comp160773_c1_seq1.mrna1;Target=comp160773_c1_seq1 336 917 .
Chr2	gffcl	locus	134742864	134743289	.	+	.	ID=RLOC_00021853;geneIDs=comp117638_c0_seq1.path1;transcripts=comp117638_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134742864	134743289	.	+	.	ID=comp117638_c0_seq1.mrna1;geneID=comp117638_c0_seq1.path1;Name=comp117638_c0_seq1;Dir=indeterminatecoverage=99.1;identity=93.9;matches=400;mismatches=24;indels=2;unknowns=0;Target=comp117638_c0_seq1 424 1 .;CDS_Target=comp117638_c0_seq1 207 166 .;locus=RLOC_00021853
Chr2	stalkie_big_nohaplotig	exon	134742864	134743289	93	+	.	Parent=comp117638_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	134743029	134743072	.	+	0	Parent=comp117638_c0_seq1.mrna1
Chr2	gffcl	locus	134834733	134835638	.	-	.	ID=RLOC_00021854;geneIDs=FBgn0039475.1.path1;transcripts=FBgn0039475.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134834733	134835638	.	-	.	ID=FBgn0039475.1.mrna1;geneID=FBgn0039475.1.path1;Name=FBgn0039475.1;Dir=sensecoverage=99.8;identity=99.3;matches=829;mismatches=5;indels=1;unknowns=0;Target=FBgn0039475.1 3 86 +;locus=RLOC_00021854
Chr2	stalkie_big_nohaplotig	exon	134834733	134835450	99	-	.	Parent=FBgn0039475.1.mrna1;Target=FBgn0039475.1 120 837 +
Chr2	stalkie_big_nohaplotig	exon	134835523	134835638	98	-	.	Parent=FBgn0039475.1.mrna1;Target=FBgn0039475.1 3 119 +
Chr2	stalkie_big_nohaplotig	CDS	134835556	134835638	.	-	0	Parent=FBgn0039475.1.mrna1
Chr2	gffcl	locus	134843353	134844500	.	-	.	ID=RLOC_00021855;geneIDs=FBgn0039476.1.path1;transcripts=FBgn0039476.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134843353	134844500	.	-	.	ID=FBgn0039476.1.mrna1;geneID=FBgn0039476.1.path1;Name=FBgn0039476.1;Dir=sensecoverage=100.0;identity=99.3;matches=1055;mismatches=7;indels=0;unknowns=0;locus=RLOC_00021855
Chr2	stalkie_big_nohaplotig	exon	134843353	134844356	99	-	.	Parent=FBgn0039476.1.mrna1;Target=FBgn0039476.1 59 1062 +
Chr2	stalkie_big_nohaplotig	exon	134844443	134844500	98	-	.	Parent=FBgn0039476.1.mrna1;Target=FBgn0039476.1 1 58 +
Chr2	stalkie_big_nohaplotig	CDS	134843353	134844356	.	-	2	Parent=FBgn0039476.1.mrna1;Target=FBgn0039476.1 59 1062 +
Chr2	stalkie_big_nohaplotig	CDS	134844443	134844500	.	-	0	Parent=FBgn0039476.1.mrna1;Target=FBgn0039476.1 1 58 +
Chr2	gffcl	locus	134864501	135066695	.	+	.	ID=RLOC_00021856;geneIDs=comp157252_c2_seq1.path1;transcripts=comp157252_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134864501	135066695	.	+	.	ID=comp157252_c2_seq1.mrna1;geneID=comp157252_c2_seq1.path1;Name=comp157252_c2_seq1;Dir=sensecoverage=99.2;identity=99.4;matches=1742;mismatches=10;indels=0;unknowns=0;locus=RLOC_00021856
Chr2	stalkie_big_nohaplotig	exon	134864501	134865253	98	+	.	Parent=comp157252_c2_seq1.mrna1;Target=comp157252_c2_seq1 16 768 +
Chr2	stalkie_big_nohaplotig	exon	134911170	134911283	100	+	.	Parent=comp157252_c2_seq1.mrna1;Target=comp157252_c2_seq1 769 882 +
Chr2	stalkie_big_nohaplotig	exon	134914210	134914408	99	+	.	Parent=comp157252_c2_seq1.mrna1;Target=comp157252_c2_seq1 883 1081 +
Chr2	stalkie_big_nohaplotig	exon	135062205	135062273	100	+	.	Parent=comp157252_c2_seq1.mrna1;Target=comp157252_c2_seq1 1082 1150 +
Chr2	stalkie_big_nohaplotig	exon	135063322	135063556	99	+	.	Parent=comp157252_c2_seq1.mrna1;Target=comp157252_c2_seq1 1151 1385 +
Chr2	stalkie_big_nohaplotig	exon	135065679	135065770	100	+	.	Parent=comp157252_c2_seq1.mrna1;Target=comp157252_c2_seq1 1386 1477 +
Chr2	stalkie_big_nohaplotig	exon	135066406	135066695	100	+	.	Parent=comp157252_c2_seq1.mrna1;Target=comp157252_c2_seq1 1478 1767 +
Chr2	stalkie_big_nohaplotig	CDS	134864502	134865253	.	+	0	Parent=comp157252_c2_seq1.mrna1;Target=comp157252_c2_seq1 17 768 +
Chr2	stalkie_big_nohaplotig	CDS	134911170	134911283	.	+	1	Parent=comp157252_c2_seq1.mrna1;Target=comp157252_c2_seq1 769 882 +
Chr2	stalkie_big_nohaplotig	CDS	134914210	134914408	.	+	1	Parent=comp157252_c2_seq1.mrna1;Target=comp157252_c2_seq1 883 1081 +
Chr2	stalkie_big_nohaplotig	CDS	135062205	135062273	.	+	0	Parent=comp157252_c2_seq1.mrna1;Target=comp157252_c2_seq1 1082 1150 +
Chr2	stalkie_big_nohaplotig	CDS	135063322	135063556	.	+	0	Parent=comp157252_c2_seq1.mrna1;Target=comp157252_c2_seq1 1151 1385 +
Chr2	stalkie_big_nohaplotig	CDS	135065679	135065770	.	+	2	Parent=comp157252_c2_seq1.mrna1;Target=comp157252_c2_seq1 1386 1477 +
Chr2	stalkie_big_nohaplotig	CDS	135066406	135066444	.	+	0	Parent=comp157252_c2_seq1.mrna1;Target=comp157252_c2_seq1 1478 1516 +
Chr2	gffcl	locus	134883621	134885477	.	-	.	ID=RLOC_00021857;geneIDs=ORF421.path1;transcripts=ORF421.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	134883621	134885477	.	-	.	ID=ORF421.mrna1;geneID=ORF421.path1;Name=ORF421;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1841;mismatches=16;indels=0;unknowns=0;Target=ORF421 1857 1 .;locus=RLOC_00021857
Chr2	stalkie_big_nohaplotig	exon	134883621	134885477	99	-	.	Parent=ORF421.mrna1
Chr2	stalkie_big_nohaplotig	CDS	134883621	134885477	.	-	0	Parent=ORF421.mrna1
Chr2	gffcl	locus	135018332	135023926	.	-	.	ID=RLOC_00021858;geneIDs=FBgn0003277.1.path1;transcripts=FBgn0003277.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135018332	135023926	.	-	.	ID=FBgn0003277.1.mrna1;geneID=FBgn0003277.1.path1;Name=FBgn0003277.1;Dir=sensecoverage=99.9;identity=100.0;matches=3773;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021858
Chr2	stalkie_big_nohaplotig	exon	135018332	135019404	100	-	.	Parent=FBgn0003277.1.mrna1;Target=FBgn0003277.1 2705 3777 +
Chr2	stalkie_big_nohaplotig	exon	135019459	135020046	99	-	.	Parent=FBgn0003277.1.mrna1;Target=FBgn0003277.1 2117 2704 +
Chr2	stalkie_big_nohaplotig	exon	135020555	135021133	100	-	.	Parent=FBgn0003277.1.mrna1;Target=FBgn0003277.1 1538 2116 +
Chr2	stalkie_big_nohaplotig	exon	135021200	135021926	100	-	.	Parent=FBgn0003277.1.mrna1;Target=FBgn0003277.1 811 1537 +
Chr2	stalkie_big_nohaplotig	exon	135023046	135023465	100	-	.	Parent=FBgn0003277.1.mrna1;Target=FBgn0003277.1 391 810 +
Chr2	stalkie_big_nohaplotig	exon	135023540	135023926	100	-	.	Parent=FBgn0003277.1.mrna1;Target=FBgn0003277.1 4 390 +
Chr2	stalkie_big_nohaplotig	CDS	135018332	135019404	.	-	2	Parent=FBgn0003277.1.mrna1;Target=FBgn0003277.1 2705 3777 +
Chr2	stalkie_big_nohaplotig	CDS	135019459	135020046	.	-	2	Parent=FBgn0003277.1.mrna1;Target=FBgn0003277.1 2117 2704 +
Chr2	stalkie_big_nohaplotig	CDS	135020555	135021133	.	-	2	Parent=FBgn0003277.1.mrna1;Target=FBgn0003277.1 1538 2116 +
Chr2	stalkie_big_nohaplotig	CDS	135021200	135021926	.	-	0	Parent=FBgn0003277.1.mrna1;Target=FBgn0003277.1 811 1537 +
Chr2	stalkie_big_nohaplotig	CDS	135023046	135023465	.	-	0	Parent=FBgn0003277.1.mrna1;Target=FBgn0003277.1 391 810 +
Chr2	stalkie_big_nohaplotig	CDS	135023540	135023926	.	-	0	Parent=FBgn0003277.1.mrna1;Target=FBgn0003277.1 4 390 +
Chr2	gffcl	locus	135050609	137015847	.	+	.	ID=RLOC_00021859;geneIDs=comp159128_c0_seq1.path1;transcripts=comp159128_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135050609	137015847	.	+	.	ID=comp159128_c0_seq1.mrna1;geneID=comp159128_c0_seq1.path1;Name=comp159128_c0_seq1;Dir=indeterminatecoverage=59.3;identity=99.8;matches=1348;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021859
Chr2	stalkie_big_nohaplotig	exon	135050609	135050785	98	+	.	Parent=comp159128_c0_seq1.mrna1;Target=comp159128_c0_seq1 177 1 .
Chr2	stalkie_big_nohaplotig	exon	135050851	135051297	100	+	.	Parent=comp159128_c0_seq1.mrna1;Target=comp159128_c0_seq1 624 178 .
Chr2	stalkie_big_nohaplotig	exon	135051364	135052072	100	+	.	Parent=comp159128_c0_seq1.mrna1;Target=comp159128_c0_seq1 1333 625 .
Chr2	stalkie_big_nohaplotig	exon	137012030	137012031	100	+	.	Parent=comp159128_c0_seq1.mrna1;Target=comp159128_c0_seq1 1335 1334 .
Chr2	stalkie_big_nohaplotig	exon	137013538	137013541	100	+	.	Parent=comp159128_c0_seq1.mrna1;Target=comp159128_c0_seq1 1339 1336 .
Chr2	stalkie_big_nohaplotig	exon	137015836	137015847	91	+	.	Parent=comp159128_c0_seq1.mrna1;Target=comp159128_c0_seq1 1351 1340 .
Chr2	stalkie_big_nohaplotig	CDS	135050776	135050785	.	+	0	Parent=comp159128_c0_seq1.mrna1;Target=comp159128_c0_seq1 177 168 .
Chr2	stalkie_big_nohaplotig	CDS	135050851	135051297	.	+	2	Parent=comp159128_c0_seq1.mrna1;Target=comp159128_c0_seq1 624 178 .
Chr2	stalkie_big_nohaplotig	CDS	135051364	135051905	.	+	2	Parent=comp159128_c0_seq1.mrna1;Target=comp159128_c0_seq1 1166 625 .
Chr2	gffcl	locus	135055439	135056297	.	+	.	ID=RLOC_00021860;geneIDs=comp143730_c0_seq1.path1;transcripts=comp143730_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135055439	135056297	.	+	.	ID=comp143730_c0_seq1.mrna1;geneID=comp143730_c0_seq1.path1;Name=comp143730_c0_seq1;Dir=antisensecoverage=98.8;identity=100.0;matches=801;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021860
Chr2	stalkie_big_nohaplotig	exon	135055439	135055532	100	+	.	Parent=comp143730_c0_seq1.mrna1;Target=comp143730_c0_seq1 718 811 -
Chr2	stalkie_big_nohaplotig	exon	135055591	135056297	100	+	.	Parent=comp143730_c0_seq1.mrna1;Target=comp143730_c0_seq1 11 717 -
Chr2	stalkie_big_nohaplotig	CDS	135055523	135055532	.	+	0	Parent=comp143730_c0_seq1.mrna1;Target=comp143730_c0_seq1 718 727 .
Chr2	stalkie_big_nohaplotig	CDS	135055591	135056186	.	+	2	Parent=comp143730_c0_seq1.mrna1;Target=comp143730_c0_seq1 122 717 .
Chr2	gffcl	locus	135120182	135120719	.	+	.	ID=RLOC_00021861;geneIDs=comp147675_c0_seq1.path1;transcripts=comp147675_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135120182	135120719	.	+	.	ID=comp147675_c0_seq1.mrna1;geneID=comp147675_c0_seq1.path1;Name=comp147675_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=538;mismatches=0;indels=0;unknowns=0;Target=comp147675_c0_seq1 538 1 .;CDS_Target=comp147675_c0_seq1 181 2 .;locus=RLOC_00021861
Chr2	stalkie_big_nohaplotig	exon	135120182	135120719	100	+	.	Parent=comp147675_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	135120183	135120362	.	+	0	Parent=comp147675_c0_seq1.mrna1
Chr2	gffcl	locus	135131883	135167241	.	+	.	ID=RLOC_00021862;geneIDs=FBgn0039479.path1,comp147675_c0_seq1.path2;transcripts=FBgn0039479.mrna1,FBgn0039479.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135131883	135162354	.	+	.	ID=FBgn0039479.mrna1;geneID=FBgn0039479.path1;Name=FBgn0039479;Dir=sensecoverage=95.4;identity=99.9;matches=849;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021862
Chr2	stalkie_big_nohaplotig	exon	135131883	135162354	.	+	.	Parent=FBgn0039479.mrna1
Chr2	stalkie_big_nohaplotig	CDS	135143904	135144083	.	+	0	Parent=FBgn0039479.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135131883	135167241	.	+	.	ID=FBgn0039479.mrna1;geneID=FBgn0039479.path1;Name=FBgn0039479;Dir=sensecoverage=100.0;identity=99.2;matches=821;mismatches=7;indels=0;unknowns=0;locus=RLOC_00021862
Chr2	stalkie_big_nohaplotig	exon	135131883	135132170	99	+	.	Parent=FBgn0039479.mrna1;Target=FBgn0039479 31 318 +
Chr2	stalkie_big_nohaplotig	exon	135132239	135132356	100	+	.	Parent=FBgn0039479.mrna1;Target=FBgn0039479 319 436 +
Chr2	stalkie_big_nohaplotig	exon	135156196	135156429	100	+	.	Parent=FBgn0039479.mrna1;Target=FBgn0039479 437 670 +
Chr2	stalkie_big_nohaplotig	exon	135162145	135162354	100	+	.	Parent=FBgn0039479.mrna1;Target=FBgn0039479 671 880 +
Chr2	stalkie_big_nohaplotig	exon	135166436	135167241	99	+	.	Parent=FBgn0039479.mrna1;Target=FBgn0039479 23 828 +
Chr2	stalkie_big_nohaplotig	CDS	135131883	135132170	99	+	0	Parent=FBgn0039479.mrna1;Target=FBgn0039479 31 318 +
Chr2	stalkie_big_nohaplotig	CDS	135132239	135132356	100	+	0	Parent=FBgn0039479.mrna1;Target=FBgn0039479 319 436 +
Chr2	stalkie_big_nohaplotig	CDS	135156196	135156429	100	+	1	Parent=FBgn0039479.mrna1;Target=FBgn0039479 437 670 +
Chr2	stalkie_big_nohaplotig	CDS	135162145	135162353	100	+	1	Parent=FBgn0039479.mrna1;Target=FBgn0039479 671 879 +
Chr2	stalkie_big_nohaplotig	CDS	135162333	135162354	100	+	0	Parent=FBgn0039479.mrna1;Target=FBgn0039479 1 22 +
Chr2	stalkie_big_nohaplotig	CDS	135166436	135167241	99	+	1	Parent=FBgn0039479.mrna1;Target=FBgn0039479 23 828 +
Chr2	gffcl	locus	135170322	135180150	.	-	.	ID=RLOC_00021863;geneIDs=FBgn0039480.1.path1;transcripts=FBgn0039480.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135170322	135180150	.	-	.	ID=FBgn0039480.1.mrna1;geneID=FBgn0039480.1.path1;Name=FBgn0039480.1;Dir=sensecoverage=100.0;identity=99.8;matches=1030;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021863
Chr2	stalkie_big_nohaplotig	exon	135170322	135170648	100	-	.	Parent=FBgn0039480.1.mrna1;Target=FBgn0039480.1 706 1032 +
Chr2	stalkie_big_nohaplotig	exon	135170716	135170964	99	-	.	Parent=FBgn0039480.1.mrna1;Target=FBgn0039480.1 457 705 +
Chr2	stalkie_big_nohaplotig	exon	135171025	135171295	100	-	.	Parent=FBgn0039480.1.mrna1;Target=FBgn0039480.1 186 456 +
Chr2	stalkie_big_nohaplotig	exon	135171360	135171532	99	-	.	Parent=FBgn0039480.1.mrna1;Target=FBgn0039480.1 13 185 +
Chr2	stalkie_big_nohaplotig	exon	135180139	135180150	100	-	.	Parent=FBgn0039480.1.mrna1;Target=FBgn0039480.1 1 12 +
Chr2	stalkie_big_nohaplotig	CDS	135170322	135170648	.	-	0	Parent=FBgn0039480.1.mrna1;Target=FBgn0039480.1 706 1032 +
Chr2	stalkie_big_nohaplotig	CDS	135170716	135170964	.	-	0	Parent=FBgn0039480.1.mrna1;Target=FBgn0039480.1 457 705 +
Chr2	stalkie_big_nohaplotig	CDS	135171025	135171295	.	-	1	Parent=FBgn0039480.1.mrna1;Target=FBgn0039480.1 186 456 +
Chr2	stalkie_big_nohaplotig	CDS	135171360	135171532	.	-	0	Parent=FBgn0039480.1.mrna1;Target=FBgn0039480.1 13 185 +
Chr2	stalkie_big_nohaplotig	CDS	135180139	135180150	.	-	0	Parent=FBgn0039480.1.mrna1;Target=FBgn0039480.1 1 12 +
Chr2	gffcl	locus	135191535	135192045	.	-	.	ID=RLOC_00021864;geneIDs=comp142709_c0_seq2.path1;transcripts=comp142709_c0_seq2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135191535	135192045	.	-	.	ID=comp142709_c0_seq2.mrna1;geneID=comp142709_c0_seq2.path1;Name=comp142709_c0_seq2;Dir=indeterminatecoverage=100.0;identity=85.5;matches=437;mismatches=74;indels=0;unknowns=0;Target=comp142709_c0_seq2 511 1 .;CDS_Target=comp142709_c0_seq2 88 2 .;locus=RLOC_00021864
Chr2	stalkie_big_nohaplotig	exon	135191535	135192045	85	-	.	Parent=comp142709_c0_seq2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	135191958	135192044	.	-	0	Parent=comp142709_c0_seq2.mrna1
Chr2	gffcl	locus	135192274	135199292	.	-	.	ID=RLOC_00021865;geneIDs=FBgn0039481.1.path1;transcripts=FBgn0039481.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135192274	135199292	.	-	.	ID=FBgn0039481.1.mrna1;geneID=FBgn0039481.1.path1;Name=FBgn0039481.1;Dir=sensecoverage=100.0;identity=99.4;matches=781;mismatches=5;indels=0;unknowns=0;locus=RLOC_00021865
Chr2	stalkie_big_nohaplotig	exon	135192274	135192725	99	-	.	Parent=FBgn0039481.1.mrna1;Target=FBgn0039481.1 335 786 +
Chr2	stalkie_big_nohaplotig	exon	135192788	135193055	99	-	.	Parent=FBgn0039481.1.mrna1;Target=FBgn0039481.1 67 334 +
Chr2	stalkie_big_nohaplotig	exon	135199227	135199292	98	-	.	Parent=FBgn0039481.1.mrna1;Target=FBgn0039481.1 1 66 +
Chr2	stalkie_big_nohaplotig	CDS	135192274	135192725	.	-	2	Parent=FBgn0039481.1.mrna1;Target=FBgn0039481.1 335 786 +
Chr2	stalkie_big_nohaplotig	CDS	135192788	135193055	.	-	0	Parent=FBgn0039481.1.mrna1;Target=FBgn0039481.1 67 334 +
Chr2	stalkie_big_nohaplotig	CDS	135199227	135199292	.	-	0	Parent=FBgn0039481.1.mrna1;Target=FBgn0039481.1 1 66 +
Chr2	gffcl	locus	135199361	135199632	.	+	.	ID=RLOC_00021866;geneIDs=comp135229_c0_seq1.path1;transcripts=comp135229_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135199361	135199632	.	+	.	ID=comp135229_c0_seq1.mrna1;geneID=comp135229_c0_seq1.path1;Name=comp135229_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=272;mismatches=0;indels=1;unknowns=0;Target=comp135229_c0_seq1 273 1 .;CDS_Target=comp135229_c0_seq1 107 3 .;locus=RLOC_00021866
Chr2	stalkie_big_nohaplotig	exon	135199361	135199632	99	+	.	Parent=comp135229_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	135199363	135199467	.	+	0	Parent=comp135229_c0_seq1.mrna1
Chr2	gffcl	locus	135202638	135204998	.	-	.	ID=RLOC_00021867;geneIDs=FBgn0041195.2.path1;transcripts=FBgn0041195.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135202638	135204998	.	-	.	ID=FBgn0041195.2.mrna1;geneID=FBgn0041195.2.path1;Name=FBgn0041195.2;Dir=sensecoverage=99.9;identity=99.0;matches=1844;mismatches=18;indels=0;unknowns=0;locus=RLOC_00021867
Chr2	stalkie_big_nohaplotig	exon	135202638	135202739	100	-	.	Parent=FBgn0041195.2.mrna1;Target=FBgn0041195.2 1761 1862 +
Chr2	stalkie_big_nohaplotig	exon	135202799	135202846	100	-	.	Parent=FBgn0041195.2.mrna1;Target=FBgn0041195.2 1713 1760 +
Chr2	stalkie_big_nohaplotig	exon	135202905	135203179	97	-	.	Parent=FBgn0041195.2.mrna1;Target=FBgn0041195.2 1438 1712 +
Chr2	stalkie_big_nohaplotig	exon	135203243	135203485	98	-	.	Parent=FBgn0041195.2.mrna1;Target=FBgn0041195.2 1195 1437 +
Chr2	stalkie_big_nohaplotig	exon	135203565	135203792	99	-	.	Parent=FBgn0041195.2.mrna1;Target=FBgn0041195.2 967 1194 +
Chr2	stalkie_big_nohaplotig	exon	135203853	135204084	99	-	.	Parent=FBgn0041195.2.mrna1;Target=FBgn0041195.2 735 966 +
Chr2	stalkie_big_nohaplotig	exon	135204148	135204372	100	-	.	Parent=FBgn0041195.2.mrna1;Target=FBgn0041195.2 510 734 +
Chr2	stalkie_big_nohaplotig	exon	135204436	135204796	99	-	.	Parent=FBgn0041195.2.mrna1;Target=FBgn0041195.2 149 509 +
Chr2	stalkie_big_nohaplotig	exon	135204851	135204998	97	-	.	Parent=FBgn0041195.2.mrna1;Target=FBgn0041195.2 1 148 +
Chr2	stalkie_big_nohaplotig	CDS	135202640	135202739	.	-	1	Parent=FBgn0041195.2.mrna1;Target=FBgn0041195.2 1761 1860 +
Chr2	stalkie_big_nohaplotig	CDS	135202799	135202846	.	-	1	Parent=FBgn0041195.2.mrna1;Target=FBgn0041195.2 1713 1760 +
Chr2	stalkie_big_nohaplotig	CDS	135202905	135203179	.	-	0	Parent=FBgn0041195.2.mrna1;Target=FBgn0041195.2 1438 1712 +
Chr2	stalkie_big_nohaplotig	CDS	135203243	135203485	.	-	0	Parent=FBgn0041195.2.mrna1;Target=FBgn0041195.2 1195 1437 +
Chr2	stalkie_big_nohaplotig	CDS	135203565	135203792	.	-	0	Parent=FBgn0041195.2.mrna1;Target=FBgn0041195.2 967 1194 +
Chr2	stalkie_big_nohaplotig	CDS	135203853	135204084	.	-	1	Parent=FBgn0041195.2.mrna1;Target=FBgn0041195.2 735 966 +
Chr2	stalkie_big_nohaplotig	CDS	135204148	135204372	.	-	1	Parent=FBgn0041195.2.mrna1;Target=FBgn0041195.2 510 734 +
Chr2	stalkie_big_nohaplotig	CDS	135204436	135204796	.	-	2	Parent=FBgn0041195.2.mrna1;Target=FBgn0041195.2 149 509 +
Chr2	stalkie_big_nohaplotig	CDS	135204851	135204998	.	-	0	Parent=FBgn0041195.2.mrna1;Target=FBgn0041195.2 1 148 +
Chr2	gffcl	locus	135206298	135209179	.	-	.	ID=RLOC_00021868;geneIDs=FBgn0041195.1.path1;transcripts=FBgn0041195.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135206298	135209179	.	-	.	ID=FBgn0041195.1.mrna1;geneID=FBgn0041195.1.path1;Name=FBgn0041195.1;Dir=sensecoverage=98.9;identity=98.5;matches=1903;mismatches=28;indels=0;unknowns=0;locus=RLOC_00021868
Chr2	stalkie_big_nohaplotig	exon	135206298	135206408	97	-	.	Parent=FBgn0041195.1.mrna1;Target=FBgn0041195.1 1842 1952 +
Chr2	stalkie_big_nohaplotig	exon	135206464	135206511	100	-	.	Parent=FBgn0041195.1.mrna1;Target=FBgn0041195.1 1794 1841 +
Chr2	stalkie_big_nohaplotig	exon	135206630	135206916	98	-	.	Parent=FBgn0041195.1.mrna1;Target=FBgn0041195.1 1507 1793 +
Chr2	stalkie_big_nohaplotig	exon	135206974	135207216	99	-	.	Parent=FBgn0041195.1.mrna1;Target=FBgn0041195.1 1264 1506 +
Chr2	stalkie_big_nohaplotig	exon	135207289	135207519	97	-	.	Parent=FBgn0041195.1.mrna1;Target=FBgn0041195.1 1033 1263 +
Chr2	stalkie_big_nohaplotig	exon	135207575	135207806	98	-	.	Parent=FBgn0041195.1.mrna1;Target=FBgn0041195.1 801 1032 +
Chr2	stalkie_big_nohaplotig	exon	135208296	135208520	98	-	.	Parent=FBgn0041195.1.mrna1;Target=FBgn0041195.1 576 800 +
Chr2	stalkie_big_nohaplotig	exon	135208572	135208914	98	-	.	Parent=FBgn0041195.1.mrna1;Target=FBgn0041195.1 233 575 +
Chr2	stalkie_big_nohaplotig	exon	135208969	135209179	98	-	.	Parent=FBgn0041195.1.mrna1;Target=FBgn0041195.1 22 232 +
Chr2	stalkie_big_nohaplotig	CDS	135206300	135206408	.	-	1	Parent=FBgn0041195.1.mrna1;Target=FBgn0041195.1 1842 1950 +
Chr2	stalkie_big_nohaplotig	CDS	135206464	135206511	.	-	1	Parent=FBgn0041195.1.mrna1;Target=FBgn0041195.1 1794 1841 +
Chr2	stalkie_big_nohaplotig	CDS	135206630	135206916	.	-	0	Parent=FBgn0041195.1.mrna1;Target=FBgn0041195.1 1507 1793 +
Chr2	stalkie_big_nohaplotig	CDS	135206974	135207216	.	-	0	Parent=FBgn0041195.1.mrna1;Target=FBgn0041195.1 1264 1506 +
Chr2	stalkie_big_nohaplotig	CDS	135207289	135207519	.	-	0	Parent=FBgn0041195.1.mrna1;Target=FBgn0041195.1 1033 1263 +
Chr2	stalkie_big_nohaplotig	CDS	135207575	135207806	.	-	1	Parent=FBgn0041195.1.mrna1;Target=FBgn0041195.1 801 1032 +
Chr2	stalkie_big_nohaplotig	CDS	135208296	135208520	.	-	1	Parent=FBgn0041195.1.mrna1;Target=FBgn0041195.1 576 800 +
Chr2	stalkie_big_nohaplotig	CDS	135208572	135208914	.	-	2	Parent=FBgn0041195.1.mrna1;Target=FBgn0041195.1 233 575 +
Chr2	stalkie_big_nohaplotig	CDS	135208969	135209179	.	-	0	Parent=FBgn0041195.1.mrna1;Target=FBgn0041195.1 22 232 +
Chr2	gffcl	locus	135209781	135212494	.	-	.	ID=RLOC_00021869;geneIDs=FBgn0039482.2.path1;transcripts=FBgn0039482.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135209781	135212494	.	-	.	ID=FBgn0039482.2.mrna1;geneID=FBgn0039482.2.path1;Name=FBgn0039482.2;Dir=sensecoverage=100.0;identity=98.9;matches=786;mismatches=9;indels=0;unknowns=0;locus=RLOC_00021869
Chr2	stalkie_big_nohaplotig	exon	135209781	135210088	98	-	.	Parent=FBgn0039482.2.mrna1;Target=FBgn0039482.2 488 795 +
Chr2	stalkie_big_nohaplotig	exon	135210156	135210289	99	-	.	Parent=FBgn0039482.2.mrna1;Target=FBgn0039482.2 354 487 +
Chr2	stalkie_big_nohaplotig	exon	135210360	135210507	99	-	.	Parent=FBgn0039482.2.mrna1;Target=FBgn0039482.2 206 353 +
Chr2	stalkie_big_nohaplotig	exon	135212211	135212303	97	-	.	Parent=FBgn0039482.2.mrna1;Target=FBgn0039482.2 113 205 +
Chr2	stalkie_big_nohaplotig	exon	135212383	135212494	100	-	.	Parent=FBgn0039482.2.mrna1;Target=FBgn0039482.2 1 112 +
Chr2	stalkie_big_nohaplotig	CDS	135209781	135210088	.	-	2	Parent=FBgn0039482.2.mrna1;Target=FBgn0039482.2 488 795 +
Chr2	stalkie_big_nohaplotig	CDS	135210156	135210289	.	-	1	Parent=FBgn0039482.2.mrna1;Target=FBgn0039482.2 354 487 +
Chr2	stalkie_big_nohaplotig	CDS	135210360	135210507	.	-	2	Parent=FBgn0039482.2.mrna1;Target=FBgn0039482.2 206 353 +
Chr2	stalkie_big_nohaplotig	CDS	135212211	135212303	.	-	2	Parent=FBgn0039482.2.mrna1;Target=FBgn0039482.2 113 205 +
Chr2	stalkie_big_nohaplotig	CDS	135212383	135212494	.	-	0	Parent=FBgn0039482.2.mrna1;Target=FBgn0039482.2 1 112 +
Chr2	gffcl	locus	135225973	135227631	.	+	.	ID=RLOC_00021870;geneIDs=FBgn0039482.1.path1;transcripts=FBgn0039482.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135225973	135227631	.	+	.	ID=FBgn0039482.1.mrna1;geneID=FBgn0039482.1.path1;Name=FBgn0039482.1;Dir=sensecoverage=100.0;identity=100.0;matches=801;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021870
Chr2	stalkie_big_nohaplotig	exon	135225973	135226063	100	+	.	Parent=FBgn0039482.1.mrna1;Target=FBgn0039482.1 1 91 +
Chr2	stalkie_big_nohaplotig	exon	135226124	135226216	100	+	.	Parent=FBgn0039482.1.mrna1;Target=FBgn0039482.1 92 184 +
Chr2	stalkie_big_nohaplotig	exon	135226292	135226445	100	+	.	Parent=FBgn0039482.1.mrna1;Target=FBgn0039482.1 185 338 +
Chr2	stalkie_big_nohaplotig	exon	135227094	135227227	100	+	.	Parent=FBgn0039482.1.mrna1;Target=FBgn0039482.1 339 472 +
Chr2	stalkie_big_nohaplotig	exon	135227303	135227631	100	+	.	Parent=FBgn0039482.1.mrna1;Target=FBgn0039482.1 473 801 +
Chr2	stalkie_big_nohaplotig	CDS	135225973	135226063	.	+	0	Parent=FBgn0039482.1.mrna1;Target=FBgn0039482.1 1 91 +
Chr2	stalkie_big_nohaplotig	CDS	135226124	135226216	.	+	2	Parent=FBgn0039482.1.mrna1;Target=FBgn0039482.1 92 184 +
Chr2	stalkie_big_nohaplotig	CDS	135226292	135226445	.	+	2	Parent=FBgn0039482.1.mrna1;Target=FBgn0039482.1 185 338 +
Chr2	stalkie_big_nohaplotig	CDS	135227094	135227227	.	+	1	Parent=FBgn0039482.1.mrna1;Target=FBgn0039482.1 339 472 +
Chr2	stalkie_big_nohaplotig	CDS	135227303	135227631	.	+	2	Parent=FBgn0039482.1.mrna1;Target=FBgn0039482.1 473 801 +
Chr2	gffcl	locus	135229637	135232145	.	+	.	ID=RLOC_00021871;geneIDs=FBgn0039483.2.path1;transcripts=FBgn0039483.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135229637	135232145	.	+	.	ID=FBgn0039483.2.mrna1;geneID=FBgn0039483.2.path1;Name=FBgn0039483.2;Dir=sensecoverage=99.7;identity=96.3;matches=730;mismatches=28;indels=0;unknowns=100;locus=RLOC_00021871
Chr2	stalkie_big_nohaplotig	exon	135229637	135229860	83	+	.	Parent=FBgn0039483.2.mrna1;Target=FBgn0039483.2 3 226 +
Chr2	stalkie_big_nohaplotig	exon	135229926	135230082	99	+	.	Parent=FBgn0039483.2.mrna1;Target=FBgn0039483.2 227 383 +
Chr2	stalkie_big_nohaplotig	exon	135231603	135231736	98	+	.	Parent=FBgn0039483.2.mrna1;Target=FBgn0039483.2 384 517 +
Chr2	stalkie_big_nohaplotig	exon	135231803	135232145	98	+	.	Parent=FBgn0039483.2.mrna1;Target=FBgn0039483.2 518 860 +
Chr2	stalkie_big_nohaplotig	CDS	135229638	135229860	.	+	0	Parent=FBgn0039483.2.mrna1;Target=FBgn0039483.2 4 226 +
Chr2	stalkie_big_nohaplotig	CDS	135229926	135230082	.	+	2	Parent=FBgn0039483.2.mrna1;Target=FBgn0039483.2 227 383 +
Chr2	stalkie_big_nohaplotig	CDS	135231603	135231736	.	+	1	Parent=FBgn0039483.2.mrna1;Target=FBgn0039483.2 384 517 +
Chr2	stalkie_big_nohaplotig	CDS	135231803	135232143	.	+	2	Parent=FBgn0039483.2.mrna1;Target=FBgn0039483.2 518 858 +
Chr2	gffcl	locus	135230326	135231130	.	+	.	ID=RLOC_00021872;geneIDs=comp153719_c0_seq1.path1;transcripts=comp153719_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135230326	135231130	.	+	.	ID=comp153719_c0_seq1.mrna1;geneID=comp153719_c0_seq1.path1;Name=comp153719_c0_seq1;Dir=indeterminatecoverage=51.2;identity=95.7;matches=770;mismatches=35;indels=0;unknowns=0;Target=comp153719_c0_seq1 1072 268 .;CDS_Target=comp153719_c0_seq1 487 350 .;locus=RLOC_00021872
Chr2	stalkie_big_nohaplotig	exon	135230326	135231130	95	+	.	Parent=comp153719_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	135230408	135230545	.	+	0	Parent=comp153719_c0_seq1.mrna1
Chr2	gffcl	locus	135241403	135249781	.	+	.	ID=RLOC_00021873;geneIDs=FBgn0039483.1.path1;transcripts=FBgn0039483.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135241403	135249781	.	+	.	ID=FBgn0039483.1.mrna1;geneID=FBgn0039483.1.path1;Name=FBgn0039483.1;Dir=sensecoverage=100.0;identity=99.9;matches=893;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021873
Chr2	stalkie_big_nohaplotig	exon	135241403	135241571	100	+	.	Parent=FBgn0039483.1.mrna1;Target=FBgn0039483.1 1 169 +
Chr2	stalkie_big_nohaplotig	exon	135248876	135249128	99	+	.	Parent=FBgn0039483.1.mrna1;Target=FBgn0039483.1 170 422 +
Chr2	stalkie_big_nohaplotig	exon	135249210	135249343	100	+	.	Parent=FBgn0039483.1.mrna1;Target=FBgn0039483.1 423 556 +
Chr2	stalkie_big_nohaplotig	exon	135249444	135249781	100	+	.	Parent=FBgn0039483.1.mrna1;Target=FBgn0039483.1 557 894 +
Chr2	stalkie_big_nohaplotig	CDS	135241403	135241571	.	+	0	Parent=FBgn0039483.1.mrna1;Target=FBgn0039483.1 1 169 +
Chr2	stalkie_big_nohaplotig	CDS	135248876	135249128	.	+	2	Parent=FBgn0039483.1.mrna1;Target=FBgn0039483.1 170 422 +
Chr2	stalkie_big_nohaplotig	CDS	135249210	135249343	.	+	1	Parent=FBgn0039483.1.mrna1;Target=FBgn0039483.1 423 556 +
Chr2	stalkie_big_nohaplotig	CDS	135249444	135249781	.	+	2	Parent=FBgn0039483.1.mrna1;Target=FBgn0039483.1 557 894 +
Chr2	gffcl	locus	135251170	135270758	.	-	.	ID=RLOC_00021874;geneIDs=FBgn0039486.2.path1;transcripts=FBgn0039486.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135251170	135270758	.	-	.	ID=FBgn0039486.2.mrna1;geneID=FBgn0039486.2.path1;Name=FBgn0039486.2;Dir=sensecoverage=100.0;identity=99.6;matches=944;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021874
Chr2	stalkie_big_nohaplotig	exon	135251170	135251343	99	-	.	Parent=FBgn0039486.2.mrna1;Target=FBgn0039486.2 775 948 +
Chr2	stalkie_big_nohaplotig	exon	135251438	135251517	97	-	.	Parent=FBgn0039486.2.mrna1;Target=FBgn0039486.2 695 774 +
Chr2	stalkie_big_nohaplotig	exon	135262331	135262481	100	-	.	Parent=FBgn0039486.2.mrna1;Target=FBgn0039486.2 544 694 +
Chr2	stalkie_big_nohaplotig	exon	135262650	135262921	100	-	.	Parent=FBgn0039486.2.mrna1;Target=FBgn0039486.2 272 543 +
Chr2	stalkie_big_nohaplotig	exon	135263157	135263247	98	-	.	Parent=FBgn0039486.2.mrna1;Target=FBgn0039486.2 181 271 +
Chr2	stalkie_big_nohaplotig	exon	135264968	135265086	100	-	.	Parent=FBgn0039486.2.mrna1;Target=FBgn0039486.2 62 180 +
Chr2	stalkie_big_nohaplotig	exon	135270698	135270758	100	-	.	Parent=FBgn0039486.2.mrna1;Target=FBgn0039486.2 1 61 +
Chr2	stalkie_big_nohaplotig	CDS	135251170	135251343	.	-	0	Parent=FBgn0039486.2.mrna1;Target=FBgn0039486.2 775 948 +
Chr2	stalkie_big_nohaplotig	CDS	135251438	135251517	.	-	2	Parent=FBgn0039486.2.mrna1;Target=FBgn0039486.2 695 774 +
Chr2	stalkie_big_nohaplotig	CDS	135262331	135262481	.	-	0	Parent=FBgn0039486.2.mrna1;Target=FBgn0039486.2 544 694 +
Chr2	stalkie_big_nohaplotig	CDS	135262650	135262921	.	-	2	Parent=FBgn0039486.2.mrna1;Target=FBgn0039486.2 272 543 +
Chr2	stalkie_big_nohaplotig	CDS	135263157	135263247	.	-	0	Parent=FBgn0039486.2.mrna1;Target=FBgn0039486.2 181 271 +
Chr2	stalkie_big_nohaplotig	CDS	135264968	135265086	.	-	2	Parent=FBgn0039486.2.mrna1;Target=FBgn0039486.2 62 180 +
Chr2	stalkie_big_nohaplotig	CDS	135270698	135270758	.	-	0	Parent=FBgn0039486.2.mrna1;Target=FBgn0039486.2 1 61 +
Chr2	gffcl	locus	135277764	135281462	.	+	.	ID=RLOC_00021875;geneIDs=ORF41.path1;transcripts=ORF41.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135277764	135281462	.	+	.	ID=ORF41.mrna1;geneID=ORF41.path1;Name=ORF41;Dir=sensecoverage=100.0;identity=98.4;matches=3587;mismatches=58;indels=0;unknowns=0;locus=RLOC_00021875
Chr2	stalkie_big_nohaplotig	exon	135277764	135278451	99	+	.	Parent=ORF41.mrna1;Target=ORF41 1 688 +
Chr2	stalkie_big_nohaplotig	exon	135278506	135281462	98	+	.	Parent=ORF41.mrna1;Target=ORF41 689 3645 +
Chr2	stalkie_big_nohaplotig	CDS	135277764	135278451	.	+	0	Parent=ORF41.mrna1;Target=ORF41 1 688 +
Chr2	stalkie_big_nohaplotig	CDS	135278506	135281462	.	+	2	Parent=ORF41.mrna1;Target=ORF41 689 3645 +
Chr2	gffcl	locus	135285177	135292667	.	-	.	ID=RLOC_00021876;geneIDs=FBgn0039487.1.path1;transcripts=FBgn0039487.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135285177	135292667	.	-	.	ID=FBgn0039487.1.mrna1;geneID=FBgn0039487.1.path1;Name=FBgn0039487.1;Dir=sensecoverage=100.0;identity=98.9;matches=1546;mismatches=14;indels=3;unknowns=0;locus=RLOC_00021876
Chr2	stalkie_big_nohaplotig	exon	135285177	135285235	100	-	.	Parent=FBgn0039487.1.mrna1;Target=FBgn0039487.1 1502 1560 +
Chr2	stalkie_big_nohaplotig	exon	135285291	135285468	100	-	.	Parent=FBgn0039487.1.mrna1;Target=FBgn0039487.1 1324 1501 +
Chr2	stalkie_big_nohaplotig	exon	135285565	135285714	98	-	.	Parent=FBgn0039487.1.mrna1;Target=FBgn0039487.1 1174 1323 +
Chr2	stalkie_big_nohaplotig	exon	135285793	135285993	100	-	.	Parent=FBgn0039487.1.mrna1;Target=FBgn0039487.1 973 1173 +
Chr2	stalkie_big_nohaplotig	exon	135286935	135287203	98	-	.	Parent=FBgn0039487.1.mrna1;Target=FBgn0039487.1 704 972 +
Chr2	stalkie_big_nohaplotig	exon	135287265	135287509	99	-	.	Parent=FBgn0039487.1.mrna1;Target=FBgn0039487.1 459 703 +
Chr2	stalkie_big_nohaplotig	exon	135292207	135292667	98	-	.	Parent=FBgn0039487.1.mrna1;Target=FBgn0039487.1 1 458 +
Chr2	stalkie_big_nohaplotig	CDS	135285177	135285235	.	-	2	Parent=FBgn0039487.1.mrna1;Target=FBgn0039487.1 1502 1560 +
Chr2	stalkie_big_nohaplotig	CDS	135285291	135285468	.	-	0	Parent=FBgn0039487.1.mrna1;Target=FBgn0039487.1 1324 1501 +
Chr2	stalkie_big_nohaplotig	CDS	135285565	135285714	.	-	0	Parent=FBgn0039487.1.mrna1;Target=FBgn0039487.1 1174 1323 +
Chr2	stalkie_big_nohaplotig	CDS	135285793	135285993	.	-	0	Parent=FBgn0039487.1.mrna1;Target=FBgn0039487.1 973 1173 +
Chr2	stalkie_big_nohaplotig	CDS	135286935	135287203	.	-	2	Parent=FBgn0039487.1.mrna1;Target=FBgn0039487.1 704 972 +
Chr2	stalkie_big_nohaplotig	CDS	135287265	135287509	.	-	1	Parent=FBgn0039487.1.mrna1;Target=FBgn0039487.1 459 703 +
Chr2	stalkie_big_nohaplotig	CDS	135292207	135292667	.	-	0	Parent=FBgn0039487.1.mrna1;Target=FBgn0039487.1 1 458 +
Chr2	gffcl	locus	135294976	135296636	.	-	.	ID=RLOC_00021877;geneIDs=FBgn0039488.1.path1;transcripts=FBgn0039488.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135294976	135296636	.	-	.	ID=FBgn0039488.1.mrna1;geneID=FBgn0039488.1.path1;Name=FBgn0039488.1;Dir=sensecoverage=100.0;identity=98.6;matches=1573;mismatches=23;indels=0;unknowns=0;locus=RLOC_00021877
Chr2	stalkie_big_nohaplotig	exon	135294976	135295147	98	-	.	Parent=FBgn0039488.1.mrna1;Target=FBgn0039488.1 1425 1596 +
Chr2	stalkie_big_nohaplotig	exon	135295213	135296636	98	-	.	Parent=FBgn0039488.1.mrna1;Target=FBgn0039488.1 1 1424 +
Chr2	stalkie_big_nohaplotig	CDS	135294976	135295147	.	-	1	Parent=FBgn0039488.1.mrna1;Target=FBgn0039488.1 1425 1596 +
Chr2	stalkie_big_nohaplotig	CDS	135295213	135296636	.	-	0	Parent=FBgn0039488.1.mrna1;Target=FBgn0039488.1 1 1424 +
Chr2	gffcl	locus	135298004	135317843	.	+	.	ID=RLOC_00021878;geneIDs=FBgn0028968.1.path1;transcripts=FBgn0028968.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135298004	135317843	.	+	.	ID=FBgn0028968.1.mrna1;geneID=FBgn0028968.1.path1;Name=FBgn0028968.1;Dir=sensecoverage=100.0;identity=99.6;matches=2617;mismatches=11;indels=0;unknowns=0;locus=RLOC_00021878
Chr2	stalkie_big_nohaplotig	exon	135298004	135298049	100	+	.	Parent=FBgn0028968.1.mrna1;Target=FBgn0028968.1 1 46 +
Chr2	stalkie_big_nohaplotig	exon	135298230	135298885	99	+	.	Parent=FBgn0028968.1.mrna1;Target=FBgn0028968.1 47 702 +
Chr2	stalkie_big_nohaplotig	exon	135315405	135316506	99	+	.	Parent=FBgn0028968.1.mrna1;Target=FBgn0028968.1 703 1804 +
Chr2	stalkie_big_nohaplotig	exon	135316570	135316751	100	+	.	Parent=FBgn0028968.1.mrna1;Target=FBgn0028968.1 1805 1986 +
Chr2	stalkie_big_nohaplotig	exon	135316876	135317050	98	+	.	Parent=FBgn0028968.1.mrna1;Target=FBgn0028968.1 1987 2161 +
Chr2	stalkie_big_nohaplotig	exon	135317126	135317311	100	+	.	Parent=FBgn0028968.1.mrna1;Target=FBgn0028968.1 2162 2347 +
Chr2	stalkie_big_nohaplotig	exon	135317389	135317541	99	+	.	Parent=FBgn0028968.1.mrna1;Target=FBgn0028968.1 2348 2500 +
Chr2	stalkie_big_nohaplotig	exon	135317716	135317843	98	+	.	Parent=FBgn0028968.1.mrna1;Target=FBgn0028968.1 2501 2628 +
Chr2	stalkie_big_nohaplotig	CDS	135298004	135298049	.	+	0	Parent=FBgn0028968.1.mrna1;Target=FBgn0028968.1 1 46 +
Chr2	stalkie_big_nohaplotig	CDS	135298230	135298885	.	+	2	Parent=FBgn0028968.1.mrna1;Target=FBgn0028968.1 47 702 +
Chr2	stalkie_big_nohaplotig	CDS	135315405	135316506	.	+	0	Parent=FBgn0028968.1.mrna1;Target=FBgn0028968.1 703 1804 +
Chr2	stalkie_big_nohaplotig	CDS	135316570	135316751	.	+	2	Parent=FBgn0028968.1.mrna1;Target=FBgn0028968.1 1805 1986 +
Chr2	stalkie_big_nohaplotig	CDS	135316876	135317050	.	+	0	Parent=FBgn0028968.1.mrna1;Target=FBgn0028968.1 1987 2161 +
Chr2	stalkie_big_nohaplotig	CDS	135317126	135317311	.	+	2	Parent=FBgn0028968.1.mrna1;Target=FBgn0028968.1 2162 2347 +
Chr2	stalkie_big_nohaplotig	CDS	135317389	135317541	.	+	2	Parent=FBgn0028968.1.mrna1;Target=FBgn0028968.1 2348 2500 +
Chr2	stalkie_big_nohaplotig	CDS	135317716	135317843	.	+	2	Parent=FBgn0028968.1.mrna1;Target=FBgn0028968.1 2501 2628 +
Chr2	gffcl	locus	135304466	135306409	.	+	.	ID=RLOC_00021879;geneIDs=FBgn0039500.1.path1;transcripts=FBgn0039500.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135304466	135306409	.	+	.	ID=FBgn0039500.1.mrna1;geneID=FBgn0039500.1.path1;Name=FBgn0039500.1;Dir=sensecoverage=100.0;identity=99.2;matches=509;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021879
Chr2	stalkie_big_nohaplotig	exon	135304466	135304628	100	+	.	Parent=FBgn0039500.1.mrna1;Target=FBgn0039500.1 1 163 +
Chr2	stalkie_big_nohaplotig	exon	135306060	135306409	98	+	.	Parent=FBgn0039500.1.mrna1;Target=FBgn0039500.1 164 513 +
Chr2	stalkie_big_nohaplotig	CDS	135304466	135304628	.	+	0	Parent=FBgn0039500.1.mrna1;Target=FBgn0039500.1 1 163 +
Chr2	stalkie_big_nohaplotig	CDS	135306060	135306409	.	+	2	Parent=FBgn0039500.1.mrna1;Target=FBgn0039500.1 164 513 +
Chr2	gffcl	locus	135311160	135312256	.	+	.	ID=RLOC_00021880;geneIDs=comp160711_c0_seq1.path2;transcripts=comp160711_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	135311160	135312256	.	+	.	ID=comp160711_c0_seq1.mrna2;geneID=comp160711_c0_seq1.path2;Name=comp160711_c0_seq1;Dir=sensecoverage=83.3;identity=95.1;matches=931;mismatches=22;indels=26;unknowns=0;Target=comp160711_c0_seq1 750 833 +;locus=RLOC_00021880
Chr2	stalkie_big_nohaplotig	exon	135311160	135311536	97	+	.	Parent=comp160711_c0_seq1.mrna2;Target=comp160711_c0_seq1 138 516 +
Chr2	stalkie_big_nohaplotig	exon	135311665	135312256	93	+	.	Parent=comp160711_c0_seq1.mrna2;Target=comp160711_c0_seq1 517 1100 +
Chr2	stalkie_big_nohaplotig	CDS	135311890	135311989	.	+	0	Parent=comp160711_c0_seq1.mrna2
Chr2	gffcl	locus	135325511	135325956	.	+	.	ID=RLOC_00021881;geneIDs=comp146349_c1_seq1.path1;transcripts=comp146349_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135325511	135325956	.	+	.	ID=comp146349_c1_seq1.mrna1;geneID=comp146349_c1_seq1.path1;Name=comp146349_c1_seq1;Dir=indeterminatecoverage=92.1;identity=98.7;matches=440;mismatches=6;indels=0;unknowns=0;Target=comp146349_c1_seq1 455 10 .;CDS_Target=comp146349_c1_seq1 192 10 .;locus=RLOC_00021881
Chr2	stalkie_big_nohaplotig	exon	135325511	135325956	98	+	.	Parent=comp146349_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	135325511	135325693	.	+	0	Parent=comp146349_c1_seq1.mrna1
Chr2	gffcl	locus	135333154	135335711	.	+	.	ID=RLOC_00021882;geneIDs=FBgn0042111.1.path1;transcripts=FBgn0042111.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135333154	135335711	.	+	.	ID=FBgn0042111.1.mrna1;geneID=FBgn0042111.1.path1;Name=FBgn0042111.1;Dir=sensecoverage=100.0;identity=99.5;matches=913;mismatches=5;indels=0;unknowns=0;locus=RLOC_00021882
Chr2	stalkie_big_nohaplotig	exon	135333154	135333186	100	+	.	Parent=FBgn0042111.1.mrna1;Target=FBgn0042111.1 1 33 +
Chr2	stalkie_big_nohaplotig	exon	135333263	135333474	100	+	.	Parent=FBgn0042111.1.mrna1;Target=FBgn0042111.1 34 245 +
Chr2	stalkie_big_nohaplotig	exon	135333544	135333648	99	+	.	Parent=FBgn0042111.1.mrna1;Target=FBgn0042111.1 246 350 +
Chr2	stalkie_big_nohaplotig	exon	135335076	135335201	100	+	.	Parent=FBgn0042111.1.mrna1;Target=FBgn0042111.1 351 476 +
Chr2	stalkie_big_nohaplotig	exon	135335270	135335711	99	+	.	Parent=FBgn0042111.1.mrna1;Target=FBgn0042111.1 477 918 +
Chr2	stalkie_big_nohaplotig	CDS	135333154	135333186	.	+	0	Parent=FBgn0042111.1.mrna1;Target=FBgn0042111.1 1 33 +
Chr2	stalkie_big_nohaplotig	CDS	135333263	135333474	.	+	0	Parent=FBgn0042111.1.mrna1;Target=FBgn0042111.1 34 245 +
Chr2	stalkie_big_nohaplotig	CDS	135333544	135333648	.	+	1	Parent=FBgn0042111.1.mrna1;Target=FBgn0042111.1 246 350 +
Chr2	stalkie_big_nohaplotig	CDS	135335076	135335201	.	+	1	Parent=FBgn0042111.1.mrna1;Target=FBgn0042111.1 351 476 +
Chr2	stalkie_big_nohaplotig	CDS	135335270	135335711	.	+	1	Parent=FBgn0042111.1.mrna1;Target=FBgn0042111.1 477 918 +
Chr2	gffcl	locus	135338685	135339672	.	+	.	ID=RLOC_00021883;geneIDs=FBgn0044871.1.path1;transcripts=FBgn0044871.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135338685	135339672	.	+	.	ID=FBgn0044871.1.mrna1;geneID=FBgn0044871.1.path1;Name=FBgn0044871.1;Dir=sensecoverage=100.0;identity=99.0;matches=677;mismatches=7;indels=0;unknowns=0;locus=RLOC_00021883
Chr2	stalkie_big_nohaplotig	exon	135338685	135338709	96	+	.	Parent=FBgn0044871.1.mrna1;Target=FBgn0044871.1 1 25 +
Chr2	stalkie_big_nohaplotig	exon	135338775	135338950	100	+	.	Parent=FBgn0044871.1.mrna1;Target=FBgn0044871.1 26 201 +
Chr2	stalkie_big_nohaplotig	exon	135339054	135339301	97	+	.	Parent=FBgn0044871.1.mrna1;Target=FBgn0044871.1 202 449 +
Chr2	stalkie_big_nohaplotig	exon	135339374	135339508	100	+	.	Parent=FBgn0044871.1.mrna1;Target=FBgn0044871.1 450 584 +
Chr2	stalkie_big_nohaplotig	exon	135339573	135339672	99	+	.	Parent=FBgn0044871.1.mrna1;Target=FBgn0044871.1 585 684 +
Chr2	stalkie_big_nohaplotig	CDS	135338685	135338709	.	+	0	Parent=FBgn0044871.1.mrna1;Target=FBgn0044871.1 1 25 +
Chr2	stalkie_big_nohaplotig	CDS	135338775	135338950	.	+	2	Parent=FBgn0044871.1.mrna1;Target=FBgn0044871.1 26 201 +
Chr2	stalkie_big_nohaplotig	CDS	135339054	135339301	.	+	0	Parent=FBgn0044871.1.mrna1;Target=FBgn0044871.1 202 449 +
Chr2	stalkie_big_nohaplotig	CDS	135339374	135339508	.	+	1	Parent=FBgn0044871.1.mrna1;Target=FBgn0044871.1 450 584 +
Chr2	stalkie_big_nohaplotig	CDS	135339573	135339672	.	+	1	Parent=FBgn0044871.1.mrna1;Target=FBgn0044871.1 585 684 +
Chr2	gffcl	locus	135341412	135342222	.	+	.	ID=RLOC_00021884;geneIDs=FBgn0051229.1.path1;transcripts=FBgn0051229.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135341412	135342222	.	+	.	ID=FBgn0051229.1.mrna1;geneID=FBgn0051229.1.path1;Name=FBgn0051229.1;Dir=sensecoverage=100.0;identity=99.3;matches=584;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021884
Chr2	stalkie_big_nohaplotig	exon	135341412	135341527	100	+	.	Parent=FBgn0051229.1.mrna1;Target=FBgn0051229.1 1 116 +
Chr2	stalkie_big_nohaplotig	exon	135341597	135341721	100	+	.	Parent=FBgn0051229.1.mrna1;Target=FBgn0051229.1 117 241 +
Chr2	stalkie_big_nohaplotig	exon	135341795	135341988	98	+	.	Parent=FBgn0051229.1.mrna1;Target=FBgn0051229.1 242 435 +
Chr2	stalkie_big_nohaplotig	exon	135342070	135342222	98	+	.	Parent=FBgn0051229.1.mrna1;Target=FBgn0051229.1 436 588 +
Chr2	stalkie_big_nohaplotig	CDS	135341412	135341527	.	+	0	Parent=FBgn0051229.1.mrna1;Target=FBgn0051229.1 1 116 +
Chr2	stalkie_big_nohaplotig	CDS	135341597	135341721	.	+	1	Parent=FBgn0051229.1.mrna1;Target=FBgn0051229.1 117 241 +
Chr2	stalkie_big_nohaplotig	CDS	135341795	135341988	.	+	2	Parent=FBgn0051229.1.mrna1;Target=FBgn0051229.1 242 435 +
Chr2	stalkie_big_nohaplotig	CDS	135342070	135342222	.	+	0	Parent=FBgn0051229.1.mrna1;Target=FBgn0051229.1 436 588 +
Chr2	gffcl	locus	135348486	135358104	.	+	.	ID=RLOC_00021885;geneIDs=comp155092_c0_seq1.path1;transcripts=comp155092_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135348486	135358104	.	+	.	ID=comp155092_c0_seq1.mrna1;geneID=comp155092_c0_seq1.path1;Name=comp155092_c0_seq1;Dir=antisensecoverage=98.7;identity=96.8;matches=1163;mismatches=20;indels=18;unknowns=0;Target=comp155092_c0_seq1 639 800 .;locus=RLOC_00021885
Chr2	stalkie_big_nohaplotig	exon	135348486	135349335	97	+	.	Parent=comp155092_c0_seq1.mrna1;Target=comp155092_c0_seq1 367 1204 -
Chr2	stalkie_big_nohaplotig	exon	135357759	135358104	96	+	.	Parent=comp155092_c0_seq1.mrna1;Target=comp155092_c0_seq1 17 366 -
Chr2	stalkie_big_nohaplotig	CDS	135348902	135349063	.	+	0	Parent=comp155092_c0_seq1.mrna1
Chr2	gffcl	locus	135358198	135366067	.	+	.	ID=RLOC_00021886;geneIDs=FBgn0038638.1.path1;transcripts=FBgn0038638.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135358198	135366067	.	+	.	ID=FBgn0038638.1.mrna1;geneID=FBgn0038638.1.path1;Name=FBgn0038638.1;Dir=sensecoverage=100.0;identity=99.7;matches=1562;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021886
Chr2	stalkie_big_nohaplotig	exon	135358198	135358236	100	+	.	Parent=FBgn0038638.1.mrna1;Target=FBgn0038638.1 1 39 +
Chr2	stalkie_big_nohaplotig	exon	135363176	135363389	99	+	.	Parent=FBgn0038638.1.mrna1;Target=FBgn0038638.1 40 253 +
Chr2	stalkie_big_nohaplotig	exon	135363451	135363854	100	+	.	Parent=FBgn0038638.1.mrna1;Target=FBgn0038638.1 254 657 +
Chr2	stalkie_big_nohaplotig	exon	135363920	135364288	99	+	.	Parent=FBgn0038638.1.mrna1;Target=FBgn0038638.1 658 1026 +
Chr2	stalkie_big_nohaplotig	exon	135365528	135366067	99	+	.	Parent=FBgn0038638.1.mrna1;Target=FBgn0038638.1 1027 1566 +
Chr2	stalkie_big_nohaplotig	CDS	135358198	135358236	.	+	0	Parent=FBgn0038638.1.mrna1;Target=FBgn0038638.1 1 39 +
Chr2	stalkie_big_nohaplotig	CDS	135363176	135363389	.	+	0	Parent=FBgn0038638.1.mrna1;Target=FBgn0038638.1 40 253 +
Chr2	stalkie_big_nohaplotig	CDS	135363451	135363854	.	+	2	Parent=FBgn0038638.1.mrna1;Target=FBgn0038638.1 254 657 +
Chr2	stalkie_big_nohaplotig	CDS	135363920	135364288	.	+	0	Parent=FBgn0038638.1.mrna1;Target=FBgn0038638.1 658 1026 +
Chr2	stalkie_big_nohaplotig	CDS	135365528	135366067	.	+	0	Parent=FBgn0038638.1.mrna1;Target=FBgn0038638.1 1027 1566 +
Chr2	gffcl	locus	135375600	135402852	.	-	.	ID=RLOC_00021888;geneIDs=FBgn0002719.1.path1;transcripts=FBgn0002719.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135375600	135402852	.	-	.	ID=FBgn0002719.1.mrna1;geneID=FBgn0002719.1.path1;Name=FBgn0002719.1;Dir=sensecoverage=100.0;identity=99.3;matches=2430;mismatches=18;indels=0;unknowns=0;locus=RLOC_00021888
Chr2	stalkie_big_nohaplotig	exon	135375600	135375709	100	-	.	Parent=FBgn0002719.1.mrna1;Target=FBgn0002719.1 2339 2448 +
Chr2	stalkie_big_nohaplotig	exon	135375783	135376748	99	-	.	Parent=FBgn0002719.1.mrna1;Target=FBgn0002719.1 1373 2338 +
Chr2	stalkie_big_nohaplotig	exon	135377026	135377221	98	-	.	Parent=FBgn0002719.1.mrna1;Target=FBgn0002719.1 1177 1372 +
Chr2	stalkie_big_nohaplotig	exon	135378252	135378587	99	-	.	Parent=FBgn0002719.1.mrna1;Target=FBgn0002719.1 841 1176 +
Chr2	stalkie_big_nohaplotig	exon	135394246	135394984	99	-	.	Parent=FBgn0002719.1.mrna1;Target=FBgn0002719.1 102 840 +
Chr2	stalkie_big_nohaplotig	exon	135402752	135402852	99	-	.	Parent=FBgn0002719.1.mrna1;Target=FBgn0002719.1 1 101 +
Chr2	stalkie_big_nohaplotig	CDS	135375600	135375709	.	-	2	Parent=FBgn0002719.1.mrna1;Target=FBgn0002719.1 2339 2448 +
Chr2	stalkie_big_nohaplotig	CDS	135375783	135376748	.	-	2	Parent=FBgn0002719.1.mrna1;Target=FBgn0002719.1 1373 2338 +
Chr2	stalkie_big_nohaplotig	CDS	135377026	135377221	.	-	0	Parent=FBgn0002719.1.mrna1;Target=FBgn0002719.1 1177 1372 +
Chr2	stalkie_big_nohaplotig	CDS	135378252	135378587	.	-	0	Parent=FBgn0002719.1.mrna1;Target=FBgn0002719.1 841 1176 +
Chr2	stalkie_big_nohaplotig	CDS	135394246	135394984	.	-	1	Parent=FBgn0002719.1.mrna1;Target=FBgn0002719.1 102 840 +
Chr2	stalkie_big_nohaplotig	CDS	135402752	135402852	.	-	0	Parent=FBgn0002719.1.mrna1;Target=FBgn0002719.1 1 101 +
Chr2	gffcl	locus	135403107	135403318	.	-	.	ID=RLOC_00021889;geneIDs=comp135343_c0_seq1.path1;transcripts=comp135343_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135403107	135403318	.	-	.	ID=comp135343_c0_seq1.mrna1;geneID=comp135343_c0_seq1.path1;Name=comp135343_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=212;mismatches=0;indels=0;unknowns=0;Target=comp135343_c0_seq1 212 1 .;CDS_Target=comp135343_c0_seq1 88 2 .;locus=RLOC_00021889
Chr2	stalkie_big_nohaplotig	exon	135403107	135403318	100	-	.	Parent=comp135343_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	135403231	135403317	.	-	0	Parent=comp135343_c0_seq1.mrna1
Chr2	gffcl	locus	135409873	135410693	.	+	.	ID=RLOC_00021890;geneIDs=ORF3209.path1;transcripts=ORF3209.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135409873	135410693	.	+	.	ID=ORF3209.mrna1;geneID=ORF3209.path1;Name=ORF3209;Dir=sensecoverage=100.0;identity=98.4;matches=744;mismatches=12;indels=0;unknowns=0;locus=RLOC_00021890
Chr2	stalkie_big_nohaplotig	exon	135409873	135410104	99	+	.	Parent=ORF3209.mrna1;Target=ORF3209 1 232 +
Chr2	stalkie_big_nohaplotig	exon	135410170	135410693	97	+	.	Parent=ORF3209.mrna1;Target=ORF3209 233 756 +
Chr2	stalkie_big_nohaplotig	CDS	135409873	135410104	.	+	0	Parent=ORF3209.mrna1;Target=ORF3209 1 232 +
Chr2	stalkie_big_nohaplotig	CDS	135410170	135410693	.	+	2	Parent=ORF3209.mrna1;Target=ORF3209 233 756 +
Chr2	gffcl	locus	135460133	135460417	.	+	.	ID=RLOC_00021891;geneIDs=comp96983_c0_seq1.path1;transcripts=comp96983_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135460133	135460417	.	+	.	ID=comp96983_c0_seq1.mrna1;geneID=comp96983_c0_seq1.path1;Name=comp96983_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=219;mismatches=0;indels=1;unknowns=0;Target=comp96983_c0_seq1 26 154 .;locus=RLOC_00021891
Chr2	stalkie_big_nohaplotig	exon	135460133	135460156	100	+	.	Parent=comp96983_c0_seq1.mrna1;Target=comp96983_c0_seq1 197 220 -
Chr2	stalkie_big_nohaplotig	exon	135460223	135460417	99	+	.	Parent=comp96983_c0_seq1.mrna1;Target=comp96983_c0_seq1 1 196 -
Chr2	stalkie_big_nohaplotig	CDS	135460265	135460393	.	+	0	Parent=comp96983_c0_seq1.mrna1
Chr2	gffcl	locus	135506699	135516773	.	-	.	ID=RLOC_00021892;geneIDs=FBgn0051345.1.path1;transcripts=FBgn0051345.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135506699	135516773	.	-	.	ID=FBgn0051345.1.mrna1;geneID=FBgn0051345.1.path1;Name=FBgn0051345.1;Dir=sensecoverage=100.0;identity=99.6;matches=666;mismatches=2;indels=1;unknowns=0;Target=FBgn0051345.1 27 74 +;locus=RLOC_00021892
Chr2	stalkie_big_nohaplotig	exon	135506699	135507010	99	-	.	Parent=FBgn0051345.1.mrna1;Target=FBgn0051345.1 358 669 +
Chr2	stalkie_big_nohaplotig	exon	135507092	135507149	100	-	.	Parent=FBgn0051345.1.mrna1;Target=FBgn0051345.1 300 357 +
Chr2	stalkie_big_nohaplotig	exon	135509254	135509373	100	-	.	Parent=FBgn0051345.1.mrna1;Target=FBgn0051345.1 180 299 +
Chr2	stalkie_big_nohaplotig	exon	135510577	135510728	98	-	.	Parent=FBgn0051345.1.mrna1;Target=FBgn0051345.1 27 179 +
Chr2	stalkie_big_nohaplotig	exon	135516748	135516773	100	-	.	Parent=FBgn0051345.1.mrna1;Target=FBgn0051345.1 1 26 +
Chr2	stalkie_big_nohaplotig	CDS	135510682	135510728	.	-	0	Parent=FBgn0051345.1.mrna1
Chr2	gffcl	locus	135590576	135604478	.	+	.	ID=RLOC_00021893;geneIDs=FBgn0038087.1.path1;transcripts=FBgn0038087.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135590576	135604478	.	+	.	ID=FBgn0038087.1.mrna1;geneID=FBgn0038087.1.path1;Name=FBgn0038087.1;Dir=sensecoverage=100.0;identity=99.6;matches=968;mismatches=3;indels=1;unknowns=0;Target=FBgn0038087.1 3 32 +;locus=RLOC_00021893
Chr2	stalkie_big_nohaplotig	exon	135590576	135590719	99	+	.	Parent=FBgn0038087.1.mrna1;Target=FBgn0038087.1 1 145 +
Chr2	stalkie_big_nohaplotig	exon	135600138	135600291	99	+	.	Parent=FBgn0038087.1.mrna1;Target=FBgn0038087.1 146 299 +
Chr2	stalkie_big_nohaplotig	exon	135602951	135603159	99	+	.	Parent=FBgn0038087.1.mrna1;Target=FBgn0038087.1 300 508 +
Chr2	stalkie_big_nohaplotig	exon	135603343	135603476	100	+	.	Parent=FBgn0038087.1.mrna1;Target=FBgn0038087.1 509 642 +
Chr2	stalkie_big_nohaplotig	exon	135603696	135603951	100	+	.	Parent=FBgn0038087.1.mrna1;Target=FBgn0038087.1 643 898 +
Chr2	stalkie_big_nohaplotig	exon	135604405	135604478	98	+	.	Parent=FBgn0038087.1.mrna1;Target=FBgn0038087.1 899 972 +
Chr2	stalkie_big_nohaplotig	CDS	135590578	135590606	.	+	0	Parent=FBgn0038087.1.mrna1
Chr2	gffcl	locus	135605450	135606417	.	+	.	ID=RLOC_00021894;geneIDs=comp163221_c0_seq1.path1;transcripts=comp163221_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135605450	135606417	.	+	.	ID=comp163221_c0_seq1.mrna1;geneID=comp163221_c0_seq1.path1;Name=comp163221_c0_seq1;Dir=indeterminatecoverage=96.3;identity=91.3;matches=923;mismatches=35;indels=53;unknowns=0;Target=comp163221_c0_seq1 1039 39 .;CDS_Target=comp163221_c0_seq1 715 677 .;locus=RLOC_00021894
Chr2	stalkie_big_nohaplotig	exon	135605450	135606417	91	+	.	Parent=comp163221_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	135606081	135606118	.	+	0	Parent=comp163221_c0_seq1.mrna1
Chr2	gffcl	locus	135653277	135653938	.	-	.	ID=RLOC_00021895;geneIDs=comp154725_c0_seq1.path1;transcripts=comp154725_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135653277	135653938	.	-	.	ID=comp154725_c0_seq1.mrna1;geneID=comp154725_c0_seq1.path1;Name=comp154725_c0_seq1;Dir=indeterminatecoverage=99.4;identity=97.0;matches=655;mismatches=7;indels=13;unknowns=0;Target=comp154725_c0_seq1 676 2 .;CDS_Target=comp154725_c0_seq1 510 370 .;locus=RLOC_00021895
Chr2	stalkie_big_nohaplotig	exon	135653277	135653938	97	-	.	Parent=comp154725_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	135653443	135653583	.	-	0	Parent=comp154725_c0_seq1.mrna1
Chr2	gffcl	locus	135654155	135654720	.	+	.	ID=RLOC_00021896;geneIDs=comp158407_c0_seq1.path1;transcripts=comp158407_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135654155	135654720	.	+	.	ID=comp158407_c0_seq1.mrna1;geneID=comp158407_c0_seq1.path1;Name=comp158407_c0_seq1;Dir=indeterminatecoverage=99.8;identity=94.0;matches=533;mismatches=33;indels=1;unknowns=0;Target=comp158407_c0_seq1 567 1 .;CDS_Target=comp158407_c0_seq1 74 3 .;locus=RLOC_00021896
Chr2	stalkie_big_nohaplotig	exon	135654155	135654720	94	+	.	Parent=comp158407_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	135654157	135654228	.	+	0	Parent=comp158407_c0_seq1.mrna1
Chr2	gffcl	locus	135654807	135655077	.	-	.	ID=RLOC_00021897;geneIDs=comp156012_c0_seq1.path1;transcripts=comp156012_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135654807	135655077	.	-	.	ID=comp156012_c0_seq1.mrna1;geneID=comp156012_c0_seq1.path1;Name=comp156012_c0_seq1;Dir=indeterminatecoverage=89.4;identity=93.7;matches=254;mismatches=16;indels=1;unknowns=0;Target=comp156012_c0_seq1 270 1 .;CDS_Target=comp156012_c0_seq1 68 3 .;locus=RLOC_00021897
Chr2	stalkie_big_nohaplotig	exon	135654807	135655077	93	-	.	Parent=comp156012_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	135655010	135655075	.	-	0	Parent=comp156012_c0_seq1.mrna1
Chr2	gffcl	locus	135663535	135664389	.	+	.	ID=RLOC_00021898;geneIDs=comp146403_c1_seq1.path1;transcripts=comp146403_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135663535	135664389	.	+	.	ID=comp146403_c1_seq1.mrna1;geneID=comp146403_c1_seq1.path1;Name=comp146403_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=849;mismatches=6;indels=3;unknowns=0;Target=comp146403_c1_seq1 858 1 .;CDS_Target=comp146403_c1_seq1 548 387 .;locus=RLOC_00021898
Chr2	stalkie_big_nohaplotig	exon	135663535	135664389	98	+	.	Parent=comp146403_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	135663921	135664082	.	+	0	Parent=comp146403_c1_seq1.mrna1
Chr2	gffcl	locus	135715118	135716062	.	-	.	ID=RLOC_00021899;geneIDs=ORF1985.path1;transcripts=ORF1985.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135715118	135716062	.	-	.	ID=ORF1985.mrna1;geneID=ORF1985.path1;Name=ORF1985;Dir=indeterminatecoverage=100.0;identity=98.7;matches=933;mismatches=12;indels=0;unknowns=0;Target=ORF1985 945 1 .;locus=RLOC_00021899
Chr2	stalkie_big_nohaplotig	exon	135715118	135716062	98	-	.	Parent=ORF1985.mrna1
Chr2	stalkie_big_nohaplotig	CDS	135715118	135716062	.	-	0	Parent=ORF1985.mrna1
Chr2	gffcl	locus	135745324	135745839	.	+	.	ID=RLOC_00021900;geneIDs=comp152407_c0_seq1.path2;transcripts=comp152407_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	135745324	135745839	.	+	.	ID=comp152407_c0_seq1.mrna2;geneID=comp152407_c0_seq1.path2;Name=comp152407_c0_seq1;Dir=indeterminatecoverage=96.1;identity=87.9;matches=501;mismatches=14;indels=55;unknowns=0;Target=comp152407_c0_seq1 592 24 .;CDS_Target=comp152407_c0_seq1 399 172 .;locus=RLOC_00021900
Chr2	stalkie_big_nohaplotig	exon	135745324	135745839	87	+	.	Parent=comp152407_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	135745472	135745698	.	+	0	Parent=comp152407_c0_seq1.mrna2
Chr2	gffcl	locus	135761862	135762588	.	+	.	ID=RLOC_00021901;geneIDs=comp150353_c0_seq1.path1;transcripts=comp150353_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135761862	135762588	.	+	.	ID=comp150353_c0_seq1.mrna1;geneID=comp150353_c0_seq1.path1;Name=comp150353_c0_seq1;Dir=indeterminatecoverage=97.5;identity=98.4;matches=720;mismatches=7;indels=5;unknowns=0;Target=comp150353_c0_seq1 733 2 .;CDS_Target=comp150353_c0_seq1 593 117 .;locus=RLOC_00021901
Chr2	stalkie_big_nohaplotig	exon	135761862	135762588	98	+	.	Parent=comp150353_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	135761972	135762448	.	+	0	Parent=comp150353_c0_seq1.mrna1
Chr2	gffcl	locus	135813886	135814605	.	+	.	ID=RLOC_00021902;geneIDs=comp153235_c0_seq1.path1;transcripts=comp153235_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135813886	135814605	.	+	.	ID=comp153235_c0_seq1.mrna1;geneID=comp153235_c0_seq1.path1;Name=comp153235_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.3;matches=708;mismatches=12;indels=0;unknowns=0;Target=comp153235_c0_seq1 721 2 .;CDS_Target=comp153235_c0_seq1 608 111 .;locus=RLOC_00021902
Chr2	stalkie_big_nohaplotig	exon	135813886	135814605	98	+	.	Parent=comp153235_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	135813995	135814492	.	+	0	Parent=comp153235_c0_seq1.mrna1
Chr2	gffcl	locus	135947199	135949248	.	-	.	ID=RLOC_00021903;geneIDs=ORF1478.path1;transcripts=ORF1478.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	135947199	135949248	.	-	.	ID=ORF1478.mrna1;geneID=ORF1478.path1;Name=ORF1478;Dir=sensecoverage=100.0;identity=97.6;matches=1063;mismatches=26;indels=0;unknowns=0;locus=RLOC_00021903
Chr2	stalkie_big_nohaplotig	exon	135947199	135947723	97	-	.	Parent=ORF1478.mrna1;Target=ORF1478 565 1089 +
Chr2	stalkie_big_nohaplotig	exon	135948500	135948607	95	-	.	Parent=ORF1478.mrna1;Target=ORF1478 457 564 +
Chr2	stalkie_big_nohaplotig	exon	135948676	135948771	93	-	.	Parent=ORF1478.mrna1;Target=ORF1478 361 456 +
Chr2	stalkie_big_nohaplotig	exon	135948889	135949248	98	-	.	Parent=ORF1478.mrna1;Target=ORF1478 1 360 +
Chr2	stalkie_big_nohaplotig	CDS	135947199	135947723	.	-	0	Parent=ORF1478.mrna1;Target=ORF1478 565 1089 +
Chr2	stalkie_big_nohaplotig	CDS	135948500	135948607	.	-	0	Parent=ORF1478.mrna1;Target=ORF1478 457 564 +
Chr2	stalkie_big_nohaplotig	CDS	135948676	135948771	.	-	0	Parent=ORF1478.mrna1;Target=ORF1478 361 456 +
Chr2	stalkie_big_nohaplotig	CDS	135948889	135949248	.	-	0	Parent=ORF1478.mrna1;Target=ORF1478 1 360 +
Chr2	gffcl	locus	136023432	136027411	.	+	.	ID=RLOC_00021904;geneIDs=FBgn0038088.1.path1;transcripts=FBgn0038088.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136023432	136027411	.	+	.	ID=FBgn0038088.1.mrna1;geneID=FBgn0038088.1.path1;Name=FBgn0038088.1;Dir=sensecoverage=100.0;identity=99.5;matches=779;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021904
Chr2	stalkie_big_nohaplotig	exon	136023432	136023584	98	+	.	Parent=FBgn0038088.1.mrna1;Target=FBgn0038088.1 1 153 +
Chr2	stalkie_big_nohaplotig	exon	136024937	136025076	100	+	.	Parent=FBgn0038088.1.mrna1;Target=FBgn0038088.1 154 293 +
Chr2	stalkie_big_nohaplotig	exon	136025658	136025777	100	+	.	Parent=FBgn0038088.1.mrna1;Target=FBgn0038088.1 294 413 +
Chr2	stalkie_big_nohaplotig	exon	136026558	136026615	98	+	.	Parent=FBgn0038088.1.mrna1;Target=FBgn0038088.1 414 471 +
Chr2	stalkie_big_nohaplotig	exon	136026810	136027022	99	+	.	Parent=FBgn0038088.1.mrna1;Target=FBgn0038088.1 472 684 +
Chr2	stalkie_big_nohaplotig	exon	136027313	136027411	100	+	.	Parent=FBgn0038088.1.mrna1;Target=FBgn0038088.1 685 783 +
Chr2	stalkie_big_nohaplotig	CDS	136023432	136023584	.	+	0	Parent=FBgn0038088.1.mrna1;Target=FBgn0038088.1 1 153 +
Chr2	stalkie_big_nohaplotig	CDS	136024937	136025076	.	+	0	Parent=FBgn0038088.1.mrna1;Target=FBgn0038088.1 154 293 +
Chr2	stalkie_big_nohaplotig	CDS	136025658	136025777	.	+	1	Parent=FBgn0038088.1.mrna1;Target=FBgn0038088.1 294 413 +
Chr2	stalkie_big_nohaplotig	CDS	136026558	136026615	.	+	1	Parent=FBgn0038088.1.mrna1;Target=FBgn0038088.1 414 471 +
Chr2	stalkie_big_nohaplotig	CDS	136026810	136027022	.	+	0	Parent=FBgn0038088.1.mrna1;Target=FBgn0038088.1 472 684 +
Chr2	stalkie_big_nohaplotig	CDS	136027313	136027411	.	+	0	Parent=FBgn0038088.1.mrna1;Target=FBgn0038088.1 685 783 +
Chr2	gffcl	locus	136124339	136130835	.	+	.	ID=RLOC_00021905;geneIDs=FBgn0038088.2.path1;transcripts=FBgn0038088.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136124339	136130835	.	+	.	ID=FBgn0038088.2.mrna1;geneID=FBgn0038088.2.path1;Name=FBgn0038088.2;Dir=sensecoverage=100.0;identity=99.7;matches=673;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021905
Chr2	stalkie_big_nohaplotig	exon	136124339	136124380	100	+	.	Parent=FBgn0038088.2.mrna1;Target=FBgn0038088.2 1 42 +
Chr2	stalkie_big_nohaplotig	exon	136128537	136128679	100	+	.	Parent=FBgn0038088.2.mrna1;Target=FBgn0038088.2 43 185 +
Chr2	stalkie_big_nohaplotig	exon	136130107	136130226	99	+	.	Parent=FBgn0038088.2.mrna1;Target=FBgn0038088.2 186 305 +
Chr2	stalkie_big_nohaplotig	exon	136130306	136130363	100	+	.	Parent=FBgn0038088.2.mrna1;Target=FBgn0038088.2 306 363 +
Chr2	stalkie_big_nohaplotig	exon	136130424	136130636	99	+	.	Parent=FBgn0038088.2.mrna1;Target=FBgn0038088.2 364 576 +
Chr2	stalkie_big_nohaplotig	exon	136130737	136130835	100	+	.	Parent=FBgn0038088.2.mrna1;Target=FBgn0038088.2 577 675 +
Chr2	stalkie_big_nohaplotig	CDS	136124339	136124380	.	+	0	Parent=FBgn0038088.2.mrna1;Target=FBgn0038088.2 1 42 +
Chr2	stalkie_big_nohaplotig	CDS	136128537	136128679	.	+	0	Parent=FBgn0038088.2.mrna1;Target=FBgn0038088.2 43 185 +
Chr2	stalkie_big_nohaplotig	CDS	136130107	136130226	.	+	1	Parent=FBgn0038088.2.mrna1;Target=FBgn0038088.2 186 305 +
Chr2	stalkie_big_nohaplotig	CDS	136130306	136130363	.	+	1	Parent=FBgn0038088.2.mrna1;Target=FBgn0038088.2 306 363 +
Chr2	stalkie_big_nohaplotig	CDS	136130424	136130636	.	+	0	Parent=FBgn0038088.2.mrna1;Target=FBgn0038088.2 364 576 +
Chr2	stalkie_big_nohaplotig	CDS	136130737	136130835	.	+	0	Parent=FBgn0038088.2.mrna1;Target=FBgn0038088.2 577 675 +
Chr2	gffcl	locus	136146758	136147591	.	-	.	ID=RLOC_00021906;geneIDs=comp153593_c0_seq1.path1;transcripts=comp153593_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136146758	136147591	.	-	.	ID=comp153593_c0_seq1.mrna1;geneID=comp153593_c0_seq1.path1;Name=comp153593_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.3;matches=820;mismatches=14;indels=0;unknowns=0;Target=comp153593_c0_seq1 837 4 .;CDS_Target=comp153593_c0_seq1 485 102 .;locus=RLOC_00021906
Chr2	stalkie_big_nohaplotig	exon	136146758	136147591	98	-	.	Parent=comp153593_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	136147110	136147493	.	-	0	Parent=comp153593_c0_seq1.mrna1
Chr2	gffcl	locus	136170186	136172187	.	+	.	ID=RLOC_00021907;geneIDs=FBgn0037242.1.path1;transcripts=FBgn0037242.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136170186	136172187	.	+	.	ID=FBgn0037242.1.mrna1;geneID=FBgn0037242.1.path1;Name=FBgn0037242.1;Dir=sensecoverage=100.0;identity=99.9;matches=1130;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021907
Chr2	stalkie_big_nohaplotig	exon	136170186	136170737	100	+	.	Parent=FBgn0037242.1.mrna1;Target=FBgn0037242.1 1 552 +
Chr2	stalkie_big_nohaplotig	exon	136170795	136170991	100	+	.	Parent=FBgn0037242.1.mrna1;Target=FBgn0037242.1 553 749 +
Chr2	stalkie_big_nohaplotig	exon	136171806	136172187	99	+	.	Parent=FBgn0037242.1.mrna1;Target=FBgn0037242.1 750 1131 +
Chr2	stalkie_big_nohaplotig	CDS	136170186	136170737	.	+	0	Parent=FBgn0037242.1.mrna1;Target=FBgn0037242.1 1 552 +
Chr2	stalkie_big_nohaplotig	CDS	136170795	136170991	.	+	0	Parent=FBgn0037242.1.mrna1;Target=FBgn0037242.1 553 749 +
Chr2	stalkie_big_nohaplotig	CDS	136171806	136172187	.	+	1	Parent=FBgn0037242.1.mrna1;Target=FBgn0037242.1 750 1131 +
Chr2	gffcl	locus	136183068	136196858	.	+	.	ID=RLOC_00021908;geneIDs=FBgn0086608.1.path1;transcripts=FBgn0086608.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136183068	136196858	.	+	.	ID=FBgn0086608.1.mrna1;geneID=FBgn0086608.1.path1;Name=FBgn0086608.1;Dir=sensecoverage=100.0;identity=99.5;matches=406;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021908
Chr2	stalkie_big_nohaplotig	exon	136183068	136183340	100	+	.	Parent=FBgn0086608.1.mrna1;Target=FBgn0086608.1 1 273 +
Chr2	stalkie_big_nohaplotig	exon	136196724	136196858	98	+	.	Parent=FBgn0086608.1.mrna1;Target=FBgn0086608.1 274 408 +
Chr2	stalkie_big_nohaplotig	CDS	136183068	136183340	.	+	0	Parent=FBgn0086608.1.mrna1;Target=FBgn0086608.1 1 273 +
Chr2	stalkie_big_nohaplotig	CDS	136196724	136196858	.	+	0	Parent=FBgn0086608.1.mrna1;Target=FBgn0086608.1 274 408 +
Chr2	gffcl	locus	136198587	136198749	.	-	.	ID=RLOC_00021909;geneIDs=comp151863_c0_seq1.path1;transcripts=comp151863_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136198587	136198749	.	-	.	ID=comp151863_c0_seq1.mrna1;geneID=comp151863_c0_seq1.path1;Name=comp151863_c0_seq1;Dir=indeterminatecoverage=75.8;identity=95.7;matches=156;mismatches=7;indels=0;unknowns=0;Target=comp151863_c0_seq1 163 1 .;CDS_Target=comp151863_c0_seq1 155 57 .;locus=RLOC_00021909
Chr2	stalkie_big_nohaplotig	exon	136198587	136198749	95	-	.	Parent=comp151863_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	136198595	136198693	.	-	0	Parent=comp151863_c0_seq1.mrna1
Chr2	gffcl	locus	136198961	136200225	.	+	.	ID=RLOC_00021910;geneIDs=comp155830_c0_seq1.path1,comp163944_c2_seq1.path1;transcripts=comp155830_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136199419	136200225	.	+	.	ID=comp155830_c0_seq1.mrna1;geneID=comp155830_c0_seq1.path1;Name=comp155830_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.1;matches=762;mismatches=45;indels=20;unknowns=0;Target=comp155830_c0_seq1 827 1 .;CDS_Target=comp155830_c0_seq1 81 1 .;locus=RLOC_00021910
Chr2	stalkie_big_nohaplotig	exon	136199419	136200225	92	+	.	Parent=comp155830_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	136199419	136199499	.	+	0	Parent=comp155830_c0_seq1.mrna1
Chr2	gffcl	locus	136201005	136203734	.	-	.	ID=RLOC_00021911;geneIDs=FBgn0037241.1.path1;transcripts=FBgn0037241.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136201005	136203734	.	-	.	ID=FBgn0037241.1.mrna1;geneID=FBgn0037241.1.path1;Name=FBgn0037241.1;Dir=sensecoverage=100.0;identity=99.3;matches=1278;mismatches=9;indels=0;unknowns=0;locus=RLOC_00021911
Chr2	stalkie_big_nohaplotig	exon	136201005	136201571	99	-	.	Parent=FBgn0037241.1.mrna1;Target=FBgn0037241.1 721 1287 +
Chr2	stalkie_big_nohaplotig	exon	136202960	136203089	98	-	.	Parent=FBgn0037241.1.mrna1;Target=FBgn0037241.1 591 720 +
Chr2	stalkie_big_nohaplotig	exon	136203145	136203734	99	-	.	Parent=FBgn0037241.1.mrna1;Target=FBgn0037241.1 1 590 +
Chr2	stalkie_big_nohaplotig	CDS	136201005	136201571	.	-	0	Parent=FBgn0037241.1.mrna1;Target=FBgn0037241.1 721 1287 +
Chr2	stalkie_big_nohaplotig	CDS	136202960	136203089	.	-	1	Parent=FBgn0037241.1.mrna1;Target=FBgn0037241.1 591 720 +
Chr2	stalkie_big_nohaplotig	CDS	136203145	136203734	.	-	0	Parent=FBgn0037241.1.mrna1;Target=FBgn0037241.1 1 590 +
Chr2	gffcl	locus	136204924	136206355	.	-	.	ID=RLOC_00021912;geneIDs=FBgn0003882.1.path1;transcripts=FBgn0003882.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136204924	136206355	.	-	.	ID=FBgn0003882.1.mrna1;geneID=FBgn0003882.1.path1;Name=FBgn0003882.1;Dir=sensecoverage=100.0;identity=99.3;matches=1355;mismatches=10;indels=0;unknowns=0;locus=RLOC_00021912
Chr2	stalkie_big_nohaplotig	exon	136204924	136205888	98	-	.	Parent=FBgn0003882.1.mrna1;Target=FBgn0003882.1 401 1365 +
Chr2	stalkie_big_nohaplotig	exon	136205956	136206355	100	-	.	Parent=FBgn0003882.1.mrna1;Target=FBgn0003882.1 1 400 +
Chr2	stalkie_big_nohaplotig	CDS	136204924	136205888	.	-	2	Parent=FBgn0003882.1.mrna1;Target=FBgn0003882.1 401 1365 +
Chr2	stalkie_big_nohaplotig	CDS	136205956	136206355	.	-	0	Parent=FBgn0003882.1.mrna1;Target=FBgn0003882.1 1 400 +
Chr2	gffcl	locus	136208222	136208449	.	-	.	ID=RLOC_00021913;geneIDs=comp150127_c0_seq1.path1;transcripts=comp150127_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136208222	136208449	.	-	.	ID=comp150127_c0_seq1.mrna1;geneID=comp150127_c0_seq1.path1;Name=comp150127_c0_seq1;Dir=indeterminatecoverage=78.2;identity=98.7;matches=226;mismatches=2;indels=1;unknowns=0;Target=comp150127_c0_seq1 282 54 .;CDS_Target=comp150127_c0_seq1 91 56 .;locus=RLOC_00021913
Chr2	stalkie_big_nohaplotig	exon	136208222	136208449	98	-	.	Parent=comp150127_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	136208412	136208447	.	-	0	Parent=comp150127_c0_seq1.mrna1
Chr2	gffcl	locus	136209155	136214843	.	-	.	ID=RLOC_00021914;geneIDs=FBgn0037240.1.path1;transcripts=FBgn0037240.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136209155	136214843	.	-	.	ID=FBgn0037240.1.mrna1;geneID=FBgn0037240.1.path1;Name=FBgn0037240.1;Dir=sensecoverage=100.0;identity=99.0;matches=4156;mismatches=41;indels=0;unknowns=0;locus=RLOC_00021914
Chr2	stalkie_big_nohaplotig	exon	136209155	136209258	100	-	.	Parent=FBgn0037240.1.mrna1;Target=FBgn0037240.1 4094 4197 +
Chr2	stalkie_big_nohaplotig	exon	136209330	136209513	96	-	.	Parent=FBgn0037240.1.mrna1;Target=FBgn0037240.1 3910 4093 +
Chr2	stalkie_big_nohaplotig	exon	136210549	136210682	100	-	.	Parent=FBgn0037240.1.mrna1;Target=FBgn0037240.1 3776 3909 +
Chr2	stalkie_big_nohaplotig	exon	136210751	136210919	99	-	.	Parent=FBgn0037240.1.mrna1;Target=FBgn0037240.1 3607 3775 +
Chr2	stalkie_big_nohaplotig	exon	136210992	136211864	99	-	.	Parent=FBgn0037240.1.mrna1;Target=FBgn0037240.1 2734 3606 +
Chr2	stalkie_big_nohaplotig	exon	136211927	136212093	98	-	.	Parent=FBgn0037240.1.mrna1;Target=FBgn0037240.1 2567 2733 +
Chr2	stalkie_big_nohaplotig	exon	136212153	136212957	99	-	.	Parent=FBgn0037240.1.mrna1;Target=FBgn0037240.1 1762 2566 +
Chr2	stalkie_big_nohaplotig	exon	136213023	136213900	99	-	.	Parent=FBgn0037240.1.mrna1;Target=FBgn0037240.1 884 1761 +
Chr2	stalkie_big_nohaplotig	exon	136213961	136214843	98	-	.	Parent=FBgn0037240.1.mrna1;Target=FBgn0037240.1 1 883 +
Chr2	stalkie_big_nohaplotig	CDS	136209155	136209258	.	-	2	Parent=FBgn0037240.1.mrna1;Target=FBgn0037240.1 4094 4197 +
Chr2	stalkie_big_nohaplotig	CDS	136209330	136209513	.	-	0	Parent=FBgn0037240.1.mrna1;Target=FBgn0037240.1 3910 4093 +
Chr2	stalkie_big_nohaplotig	CDS	136210549	136210682	.	-	2	Parent=FBgn0037240.1.mrna1;Target=FBgn0037240.1 3776 3909 +
Chr2	stalkie_big_nohaplotig	CDS	136210751	136210919	.	-	0	Parent=FBgn0037240.1.mrna1;Target=FBgn0037240.1 3607 3775 +
Chr2	stalkie_big_nohaplotig	CDS	136210992	136211864	.	-	0	Parent=FBgn0037240.1.mrna1;Target=FBgn0037240.1 2734 3606 +
Chr2	stalkie_big_nohaplotig	CDS	136211927	136212093	.	-	2	Parent=FBgn0037240.1.mrna1;Target=FBgn0037240.1 2567 2733 +
Chr2	stalkie_big_nohaplotig	CDS	136212153	136212957	.	-	0	Parent=FBgn0037240.1.mrna1;Target=FBgn0037240.1 1762 2566 +
Chr2	stalkie_big_nohaplotig	CDS	136213023	136213900	.	-	2	Parent=FBgn0037240.1.mrna1;Target=FBgn0037240.1 884 1761 +
Chr2	stalkie_big_nohaplotig	CDS	136213961	136214843	.	-	0	Parent=FBgn0037240.1.mrna1;Target=FBgn0037240.1 1 883 +
Chr2	gffcl	locus	136224118	136225640	.	+	.	ID=RLOC_00021915;geneIDs=FBgn0039130.1.path2;transcripts=FBgn0039130.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	136224118	136225640	.	+	.	ID=FBgn0039130.1.mrna2;geneID=FBgn0039130.1.path2;Name=FBgn0039130.1;Dir=sensecoverage=100.0;identity=99.6;matches=1130;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021915
Chr2	stalkie_big_nohaplotig	exon	136224118	136224172	100	+	.	Parent=FBgn0039130.1.mrna2;Target=FBgn0039130.1 1 55 +
Chr2	stalkie_big_nohaplotig	exon	136224360	136224533	100	+	.	Parent=FBgn0039130.1.mrna2;Target=FBgn0039130.1 56 229 +
Chr2	stalkie_big_nohaplotig	exon	136224597	136224965	99	+	.	Parent=FBgn0039130.1.mrna2;Target=FBgn0039130.1 230 598 +
Chr2	stalkie_big_nohaplotig	exon	136225046	136225314	100	+	.	Parent=FBgn0039130.1.mrna2;Target=FBgn0039130.1 599 867 +
Chr2	stalkie_big_nohaplotig	exon	136225374	136225640	99	+	.	Parent=FBgn0039130.1.mrna2;Target=FBgn0039130.1 868 1134 +
Chr2	stalkie_big_nohaplotig	CDS	136224118	136224172	.	+	0	Parent=FBgn0039130.1.mrna2;Target=FBgn0039130.1 1 55 +
Chr2	stalkie_big_nohaplotig	CDS	136224360	136224533	.	+	2	Parent=FBgn0039130.1.mrna2;Target=FBgn0039130.1 56 229 +
Chr2	stalkie_big_nohaplotig	CDS	136224597	136224965	.	+	2	Parent=FBgn0039130.1.mrna2;Target=FBgn0039130.1 230 598 +
Chr2	stalkie_big_nohaplotig	CDS	136225046	136225314	.	+	2	Parent=FBgn0039130.1.mrna2;Target=FBgn0039130.1 599 867 +
Chr2	stalkie_big_nohaplotig	CDS	136225374	136225640	.	+	0	Parent=FBgn0039130.1.mrna2;Target=FBgn0039130.1 868 1134 +
Chr2	gffcl	locus	136233308	136237209	.	+	.	ID=RLOC_00021916;geneIDs=FBgn0037249.1.path1;transcripts=FBgn0037249.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136233308	136237209	.	+	.	ID=FBgn0037249.1.mrna1;geneID=FBgn0037249.1.path1;Name=FBgn0037249.1;Dir=sensecoverage=100.0;identity=99.6;matches=3434;mismatches=13;indels=0;unknowns=0;locus=RLOC_00021916
Chr2	stalkie_big_nohaplotig	exon	136233308	136233416	100	+	.	Parent=FBgn0037249.1.mrna1;Target=FBgn0037249.1 1 109 +
Chr2	stalkie_big_nohaplotig	exon	136233601	136234685	99	+	.	Parent=FBgn0037249.1.mrna1;Target=FBgn0037249.1 110 1194 +
Chr2	stalkie_big_nohaplotig	exon	136234748	136235530	100	+	.	Parent=FBgn0037249.1.mrna1;Target=FBgn0037249.1 1195 1977 +
Chr2	stalkie_big_nohaplotig	exon	136235603	136236407	99	+	.	Parent=FBgn0037249.1.mrna1;Target=FBgn0037249.1 1978 2782 +
Chr2	stalkie_big_nohaplotig	exon	136236471	136237088	99	+	.	Parent=FBgn0037249.1.mrna1;Target=FBgn0037249.1 2783 3400 +
Chr2	stalkie_big_nohaplotig	exon	136237163	136237209	97	+	.	Parent=FBgn0037249.1.mrna1;Target=FBgn0037249.1 3401 3447 +
Chr2	stalkie_big_nohaplotig	CDS	136233308	136233416	.	+	0	Parent=FBgn0037249.1.mrna1;Target=FBgn0037249.1 1 109 +
Chr2	stalkie_big_nohaplotig	CDS	136233601	136234685	.	+	2	Parent=FBgn0037249.1.mrna1;Target=FBgn0037249.1 110 1194 +
Chr2	stalkie_big_nohaplotig	CDS	136234748	136235530	.	+	0	Parent=FBgn0037249.1.mrna1;Target=FBgn0037249.1 1195 1977 +
Chr2	stalkie_big_nohaplotig	CDS	136235603	136236407	.	+	0	Parent=FBgn0037249.1.mrna1;Target=FBgn0037249.1 1978 2782 +
Chr2	stalkie_big_nohaplotig	CDS	136236471	136237088	.	+	2	Parent=FBgn0037249.1.mrna1;Target=FBgn0037249.1 2783 3400 +
Chr2	stalkie_big_nohaplotig	CDS	136237163	136237209	.	+	2	Parent=FBgn0037249.1.mrna1;Target=FBgn0037249.1 3401 3447 +
Chr2	gffcl	locus	136244000	136248317	.	+	.	ID=RLOC_00021917;geneIDs=FBgn0037248.1.path1;transcripts=FBgn0037248.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136244000	136248317	.	+	.	ID=FBgn0037248.1.mrna1;geneID=FBgn0037248.1.path1;Name=FBgn0037248.1;Dir=sensecoverage=100.0;identity=99.1;matches=3152;mismatches=22;indels=6;unknowns=0;locus=RLOC_00021917
Chr2	stalkie_big_nohaplotig	exon	136244000	136244106	100	+	.	Parent=FBgn0037248.1.mrna1;Target=FBgn0037248.1 1 107 +
Chr2	stalkie_big_nohaplotig	exon	136244173	136244329	99	+	.	Parent=FBgn0037248.1.mrna1;Target=FBgn0037248.1 108 264 +
Chr2	stalkie_big_nohaplotig	exon	136244408	136245196	98	+	.	Parent=FBgn0037248.1.mrna1;Target=FBgn0037248.1 265 1059 +
Chr2	stalkie_big_nohaplotig	exon	136245254	136246946	99	+	.	Parent=FBgn0037248.1.mrna1;Target=FBgn0037248.1 1060 2752 +
Chr2	stalkie_big_nohaplotig	exon	136247023	136247149	97	+	.	Parent=FBgn0037248.1.mrna1;Target=FBgn0037248.1 2753 2879 +
Chr2	stalkie_big_nohaplotig	exon	136247220	136247365	100	+	.	Parent=FBgn0037248.1.mrna1;Target=FBgn0037248.1 2880 3025 +
Chr2	stalkie_big_nohaplotig	exon	136248163	136248317	100	+	.	Parent=FBgn0037248.1.mrna1;Target=FBgn0037248.1 3026 3180 +
Chr2	stalkie_big_nohaplotig	CDS	136244000	136244106	.	+	0	Parent=FBgn0037248.1.mrna1;Target=FBgn0037248.1 1 107 +
Chr2	stalkie_big_nohaplotig	CDS	136244173	136244329	.	+	1	Parent=FBgn0037248.1.mrna1;Target=FBgn0037248.1 108 264 +
Chr2	stalkie_big_nohaplotig	CDS	136244408	136245196	.	+	0	Parent=FBgn0037248.1.mrna1;Target=FBgn0037248.1 265 1059 +
Chr2	stalkie_big_nohaplotig	CDS	136245254	136246946	.	+	0	Parent=FBgn0037248.1.mrna1;Target=FBgn0037248.1 1060 2752 +
Chr2	stalkie_big_nohaplotig	CDS	136247023	136247149	.	+	2	Parent=FBgn0037248.1.mrna1;Target=FBgn0037248.1 2753 2879 +
Chr2	stalkie_big_nohaplotig	CDS	136247220	136247365	.	+	1	Parent=FBgn0037248.1.mrna1;Target=FBgn0037248.1 2880 3025 +
Chr2	stalkie_big_nohaplotig	CDS	136248163	136248317	.	+	2	Parent=FBgn0037248.1.mrna1;Target=FBgn0037248.1 3026 3180 +
Chr2	gffcl	locus	136344079	136344693	.	-	.	ID=RLOC_00021918;geneIDs=comp143049_c0_seq1.path1;transcripts=comp143049_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136344079	136344693	.	-	.	ID=comp143049_c0_seq1.mrna1;geneID=comp143049_c0_seq1.path1;Name=comp143049_c0_seq1;Dir=indeterminatecoverage=100.0;identity=87.8;matches=503;mismatches=53;indels=17;unknowns=0;Target=comp143049_c0_seq1 594 475 .;locus=RLOC_00021918
Chr2	stalkie_big_nohaplotig	exon	136344079	136344483	87	-	.	Parent=comp143049_c0_seq1.mrna1;Target=comp143049_c0_seq1 594 184 .
Chr2	stalkie_big_nohaplotig	exon	136344532	136344693	88	-	.	Parent=comp143049_c0_seq1.mrna1;Target=comp143049_c0_seq1 151 1 .
Chr2	stalkie_big_nohaplotig	CDS	136344079	136344193	.	-	0	Parent=comp143049_c0_seq1.mrna1
Chr2	gffcl	locus	136392305	136396206	.	-	.	ID=RLOC_00021919;geneIDs=FBgn0037249.1.path2;transcripts=FBgn0037249.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	136392305	136396206	.	-	.	ID=FBgn0037249.1.mrna2;geneID=FBgn0037249.1.path2;Name=FBgn0037249.1;Dir=sensecoverage=100.0;identity=99.6;matches=3434;mismatches=13;indels=0;unknowns=0;locus=RLOC_00021919
Chr2	stalkie_big_nohaplotig	exon	136392305	136392351	97	-	.	Parent=FBgn0037249.1.mrna2;Target=FBgn0037249.1 3401 3447 +
Chr2	stalkie_big_nohaplotig	exon	136392426	136393043	99	-	.	Parent=FBgn0037249.1.mrna2;Target=FBgn0037249.1 2783 3400 +
Chr2	stalkie_big_nohaplotig	exon	136393107	136393911	99	-	.	Parent=FBgn0037249.1.mrna2;Target=FBgn0037249.1 1978 2782 +
Chr2	stalkie_big_nohaplotig	exon	136393984	136394766	100	-	.	Parent=FBgn0037249.1.mrna2;Target=FBgn0037249.1 1195 1977 +
Chr2	stalkie_big_nohaplotig	exon	136394829	136395913	99	-	.	Parent=FBgn0037249.1.mrna2;Target=FBgn0037249.1 110 1194 +
Chr2	stalkie_big_nohaplotig	exon	136396098	136396206	100	-	.	Parent=FBgn0037249.1.mrna2;Target=FBgn0037249.1 1 109 +
Chr2	stalkie_big_nohaplotig	CDS	136392305	136392351	.	-	2	Parent=FBgn0037249.1.mrna2;Target=FBgn0037249.1 3401 3447 +
Chr2	stalkie_big_nohaplotig	CDS	136392426	136393043	.	-	2	Parent=FBgn0037249.1.mrna2;Target=FBgn0037249.1 2783 3400 +
Chr2	stalkie_big_nohaplotig	CDS	136393107	136393911	.	-	0	Parent=FBgn0037249.1.mrna2;Target=FBgn0037249.1 1978 2782 +
Chr2	stalkie_big_nohaplotig	CDS	136393984	136394766	.	-	0	Parent=FBgn0037249.1.mrna2;Target=FBgn0037249.1 1195 1977 +
Chr2	stalkie_big_nohaplotig	CDS	136394829	136395913	.	-	2	Parent=FBgn0037249.1.mrna2;Target=FBgn0037249.1 110 1194 +
Chr2	stalkie_big_nohaplotig	CDS	136396098	136396206	.	-	0	Parent=FBgn0037249.1.mrna2;Target=FBgn0037249.1 1 109 +
Chr2	gffcl	locus	136397705	136400195	.	-	.	ID=RLOC_00021920;geneIDs=ORF1078.path1;transcripts=ORF1078.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136397705	136400195	.	-	.	ID=ORF1078.mrna1;geneID=ORF1078.path1;Name=ORF1078;Dir=sensecoverage=99.8;identity=99.5;matches=1240;mismatches=6;indels=0;unknowns=0;locus=RLOC_00021920
Chr2	stalkie_big_nohaplotig	exon	136397705	136397930	98	-	.	Parent=ORF1078.mrna1;Target=ORF1078 1023 1248 +
Chr2	stalkie_big_nohaplotig	exon	136398486	136398627	99	-	.	Parent=ORF1078.mrna1;Target=ORF1078 881 1022 +
Chr2	stalkie_big_nohaplotig	exon	136399255	136400107	99	-	.	Parent=ORF1078.mrna1;Target=ORF1078 28 880 +
Chr2	stalkie_big_nohaplotig	exon	136400171	136400195	100	-	.	Parent=ORF1078.mrna1;Target=ORF1078 3 27 +
Chr2	stalkie_big_nohaplotig	CDS	136397705	136397930	.	-	1	Parent=ORF1078.mrna1;Target=ORF1078 1023 1248 +
Chr2	stalkie_big_nohaplotig	CDS	136398486	136398627	.	-	2	Parent=ORF1078.mrna1;Target=ORF1078 881 1022 +
Chr2	stalkie_big_nohaplotig	CDS	136399255	136400107	.	-	0	Parent=ORF1078.mrna1;Target=ORF1078 28 880 +
Chr2	stalkie_big_nohaplotig	CDS	136400171	136400194	.	-	0	Parent=ORF1078.mrna1;Target=ORF1078 4 27 +
Chr2	stalkie_big_nohaplotig	mRNA	136402570	136402878	.	+	.	ID=comp116280_c0_seq1.mrna1;geneID=comp116280_c0_seq1.path1;Name=comp116280_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=304;mismatches=5;indels=0;unknowns=0;Target=comp116280_c0_seq1 309 1 .;CDS_Target=comp116280_c0_seq1 106 68 .;locus=RLOC_00021921
Chr2	stalkie_big_nohaplotig	exon	136402570	136402878	98	+	.	Parent=comp116280_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	136402637	136402675	.	+	0	Parent=comp116280_c0_seq1.mrna1
Chr2	gffcl	locus	136408329	136409018	.	+	.	ID=RLOC_00021922;geneIDs=FBgn0037749.1.path1;transcripts=FBgn0037749.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136408329	136409018	.	+	.	ID=FBgn0037749.1.mrna1;geneID=FBgn0037749.1.path1;Name=FBgn0037749.1;Dir=sensecoverage=100.0;identity=98.4;matches=614;mismatches=10;indels=0;unknowns=0;locus=RLOC_00021922
Chr2	stalkie_big_nohaplotig	exon	136408329	136408413	98	+	.	Parent=FBgn0037749.1.mrna1;Target=FBgn0037749.1 1 85 +
Chr2	stalkie_big_nohaplotig	exon	136408480	136409018	98	+	.	Parent=FBgn0037749.1.mrna1;Target=FBgn0037749.1 86 624 +
Chr2	stalkie_big_nohaplotig	CDS	136408329	136408413	.	+	0	Parent=FBgn0037749.1.mrna1;Target=FBgn0037749.1 1 85 +
Chr2	stalkie_big_nohaplotig	CDS	136408480	136409018	.	+	2	Parent=FBgn0037749.1.mrna1;Target=FBgn0037749.1 86 624 +
Chr2	gffcl	locus	136414972	136415391	.	+	.	ID=RLOC_00021923;geneIDs=comp153465_c0_seq1.path1;transcripts=comp153465_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136414972	136415391	.	+	.	ID=comp153465_c0_seq1.mrna1;geneID=comp153465_c0_seq1.path1;Name=comp153465_c0_seq1;Dir=indeterminatecoverage=96.8;identity=97.2;matches=413;mismatches=7;indels=5;unknowns=0;Target=comp153465_c0_seq1 425 1 .;CDS_Target=comp153465_c0_seq1 65 3 .;locus=RLOC_00021923
Chr2	stalkie_big_nohaplotig	exon	136414972	136415391	97	+	.	Parent=comp153465_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	136414974	136415036	.	+	0	Parent=comp153465_c0_seq1.mrna1
Chr2	gffcl	locus	136415872	136418569	.	-	.	ID=RLOC_00021924;geneIDs=FBgn0037747.1.path1,comp118633_c0_seq1.path1;transcripts=FBgn0037747.1.mrna1,comp118633_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136415872	136418569	.	-	.	ID=FBgn0037747.1.mrna1;geneID=FBgn0037747.1.path1;Name=FBgn0037747.1;Dir=sensecoverage=100.0;identity=100.0;matches=717;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021924
Chr2	stalkie_big_nohaplotig	exon	136415872	136416372	100	-	.	Parent=FBgn0037747.1.mrna1;Target=FBgn0037747.1 217 717 +
Chr2	stalkie_big_nohaplotig	exon	136416492	136416605	100	-	.	Parent=FBgn0037747.1.mrna1;Target=FBgn0037747.1 103 216 +
Chr2	stalkie_big_nohaplotig	exon	136418468	136418569	100	-	.	Parent=FBgn0037747.1.mrna1;Target=FBgn0037747.1 1 102 +
Chr2	stalkie_big_nohaplotig	CDS	136415872	136416372	.	-	0	Parent=FBgn0037747.1.mrna1;Target=FBgn0037747.1 217 717 +
Chr2	stalkie_big_nohaplotig	CDS	136416492	136416605	.	-	0	Parent=FBgn0037747.1.mrna1;Target=FBgn0037747.1 103 216 +
Chr2	stalkie_big_nohaplotig	CDS	136418468	136418569	.	-	0	Parent=FBgn0037747.1.mrna1;Target=FBgn0037747.1 1 102 +
Chr2	stalkie_big_nohaplotig	mRNA	136417798	136418490	.	-	.	ID=comp118633_c0_seq1.mrna1;geneID=comp118633_c0_seq1.path1;Name=comp118633_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=691;mismatches=2;indels=0;unknowns=0;Target=comp118633_c0_seq1 693 1 .;CDS_Target=comp118633_c0_seq1 138 1 .;locus=RLOC_00021924
Chr2	stalkie_big_nohaplotig	exon	136417798	136418490	99	-	.	Parent=comp118633_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	136418353	136418490	.	-	0	Parent=comp118633_c0_seq1.mrna1
Chr2	gffcl	locus	136417106	136839156	.	.	.	ID=RLOC_00021925;geneIDs=FBgn0016754.path1,comp147448_c2_seq1.path1,comp149017_c0_seq1.path1,comp153143_c0_seq1.path1,comp159350_c2_seq1.path1;transcripts=comp153143_c0_seq1.mrna1,FBgn0016754.mrna1,FBgn0016754.mrna1,FBgn0016754.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136417106	136743841	.	+	.	ID=comp153143_c0_seq1.mrna1;geneID=comp153143_c0_seq1.path1;Name=comp153143_c0_seq1;Dir=antisensecoverage=88.7;identity=84.2;matches=510;mismatches=22;indels=74;unknowns=0;Target=comp153143_c0_seq1 272 367 .;locus=RLOC_00021925
Chr2	stalkie_big_nohaplotig	exon	136417106	136417282	81	+	.	Parent=comp153143_c0_seq1.mrna1;Target=comp153143_c0_seq1 482 683 -
Chr2	stalkie_big_nohaplotig	exon	136417344	136417648	83	+	.	Parent=comp153143_c0_seq1.mrna1;Target=comp153143_c0_seq1 128 481 -
Chr2	stalkie_big_nohaplotig	exon	136723213	136723222	90	+	.	Parent=comp153143_c0_seq1.mrna1;Target=comp153143_c0_seq1 118 127 -
Chr2	stalkie_big_nohaplotig	exon	136728579	136728582	100	+	.	Parent=comp153143_c0_seq1.mrna1;Target=comp153143_c0_seq1 114 117 -
Chr2	stalkie_big_nohaplotig	exon	136730845	136730855	100	+	.	Parent=comp153143_c0_seq1.mrna1;Target=comp153143_c0_seq1 103 113 -
Chr2	stalkie_big_nohaplotig	exon	136732485	136732486	100	+	.	Parent=comp153143_c0_seq1.mrna1;Target=comp153143_c0_seq1 101 102 -
Chr2	stalkie_big_nohaplotig	exon	136733280	136733283	100	+	.	Parent=comp153143_c0_seq1.mrna1;Target=comp153143_c0_seq1 97 100 -
Chr2	stalkie_big_nohaplotig	exon	136740578	136740584	100	+	.	Parent=comp153143_c0_seq1.mrna1;Target=comp153143_c0_seq1 90 96 -
Chr2	stalkie_big_nohaplotig	exon	136743609	136743617	100	+	.	Parent=comp153143_c0_seq1.mrna1;Target=comp153143_c0_seq1 81 89 -
Chr2	stalkie_big_nohaplotig	exon	136743839	136743841	100	+	.	Parent=comp153143_c0_seq1.mrna1;Target=comp153143_c0_seq1 78 80 -
Chr2	stalkie_big_nohaplotig	CDS	136417458	136417507	.	+	0	Parent=comp153143_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136584633	136770453	.	+	.	ID=FBgn0016754.mrna1;geneID=FBgn0016754.path1;Name=FBgn0016754;Dir=sensecoverage=100.0;identity=99.8;matches=554;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021925
Chr2	stalkie_big_nohaplotig	exon	136584633	136770453	.	+	.	Parent=FBgn0016754.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136584633	136839152	.	+	.	ID=FBgn0016754.mrna1;geneID=FBgn0016754.path1;Name=FBgn0016754;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1663;mismatches=11;indels=0;unknowns=0;locus=RLOC_00021925
Chr2	stalkie_big_nohaplotig	exon	136584633	136584922	100	+	.	Parent=FBgn0016754.mrna1;Target=FBgn0016754 1 290 +
Chr2	stalkie_big_nohaplotig	exon	136656436	136656494	100	+	.	Parent=FBgn0016754.mrna1;Target=FBgn0016754 291 349 +
Chr2	stalkie_big_nohaplotig	exon	136659492	136659556	100	+	.	Parent=FBgn0016754.mrna1;Target=FBgn0016754 350 414 +
Chr2	stalkie_big_nohaplotig	exon	136770313	136770453	99	+	.	Parent=FBgn0016754.mrna1;Target=FBgn0016754 415 555 +
Chr2	stalkie_big_nohaplotig	exon	136822171	136823844	99	+	.	Parent=FBgn0016754.mrna1;Target=FBgn0016754 1674 1 .
Chr2	stalkie_big_nohaplotig	exon	136836048	136836557	99	+	.	Parent=FBgn0016754.mrna1;Target=FBgn0016754 3 512 +
Chr2	stalkie_big_nohaplotig	exon	136838848	136839152	99	+	.	Parent=FBgn0016754.mrna1;Target=FBgn0016754 513 817 +
Chr2	stalkie_big_nohaplotig	CDS	136584633	136584922	100	+	0	Parent=FBgn0016754.mrna1;Target=FBgn0016754 1 290 +
Chr2	stalkie_big_nohaplotig	CDS	136656436	136656494	100	+	2	Parent=FBgn0016754.mrna1;Target=FBgn0016754 291 349 +
Chr2	stalkie_big_nohaplotig	CDS	136659492	136659556	100	+	1	Parent=FBgn0016754.mrna1;Target=FBgn0016754 350 414 +
Chr2	stalkie_big_nohaplotig	CDS	136770313	136770453	99	+	0	Parent=FBgn0016754.mrna1;Target=FBgn0016754 415 555 +
Chr2	stalkie_big_nohaplotig	CDS	136822171	136823844	99	+	0	Parent=FBgn0016754.mrna1;Target=FBgn0016754 1674 1 .
Chr2	stalkie_big_nohaplotig	CDS	136836049	136836557	99	+	0	Parent=FBgn0016754.mrna1;Target=FBgn0016754 4 512 +
Chr2	stalkie_big_nohaplotig	CDS	136838848	136839151	99	+	2	Parent=FBgn0016754.mrna1;Target=FBgn0016754 513 816 +
Chr2	stalkie_big_nohaplotig	mRNA	136836048	136839152	.	+	.	ID=FBgn0016754.mrna1;geneID=FBgn0016754.path1;Name=FBgn0016754;Dir=sensecoverage=99.5;identity=99.5;matches=811;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021925
Chr2	stalkie_big_nohaplotig	exon	136836048	136839152	.	+	.	Parent=FBgn0016754.mrna1
Chr2	gffcl	locus	136421443	136423619	.	-	.	ID=RLOC_00021926;geneIDs=FBgn0037746.1.path1;transcripts=FBgn0037746.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136421443	136423619	.	-	.	ID=FBgn0037746.1.mrna1;geneID=FBgn0037746.1.path1;Name=FBgn0037746.1;Dir=sensecoverage=100.0;identity=99.4;matches=2016;mismatches=12;indels=0;unknowns=0;locus=RLOC_00021926
Chr2	stalkie_big_nohaplotig	exon	136421443	136421681	99	-	.	Parent=FBgn0037746.1.mrna1;Target=FBgn0037746.1 1790 2028 +
Chr2	stalkie_big_nohaplotig	exon	136421746	136422807	99	-	.	Parent=FBgn0037746.1.mrna1;Target=FBgn0037746.1 728 1789 +
Chr2	stalkie_big_nohaplotig	exon	136422893	136423619	99	-	.	Parent=FBgn0037746.1.mrna1;Target=FBgn0037746.1 1 727 +
Chr2	stalkie_big_nohaplotig	CDS	136421443	136421681	.	-	2	Parent=FBgn0037746.1.mrna1;Target=FBgn0037746.1 1790 2028 +
Chr2	stalkie_big_nohaplotig	CDS	136421746	136422807	.	-	2	Parent=FBgn0037746.1.mrna1;Target=FBgn0037746.1 728 1789 +
Chr2	stalkie_big_nohaplotig	CDS	136422893	136423619	.	-	0	Parent=FBgn0037746.1.mrna1;Target=FBgn0037746.1 1 727 +
Chr2	gffcl	locus	136426040	136429737	.	+	.	ID=RLOC_00021927;geneIDs=FBgn0037580.1.path1;transcripts=FBgn0037580.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136426040	136429737	.	+	.	ID=FBgn0037580.1.mrna1;geneID=FBgn0037580.1.path1;Name=FBgn0037580.1;Dir=sensecoverage=100.0;identity=99.3;matches=2381;mismatches=16;indels=0;unknowns=0;locus=RLOC_00021927
Chr2	stalkie_big_nohaplotig	exon	136426040	136426242	98	+	.	Parent=FBgn0037580.1.mrna1;Target=FBgn0037580.1 1 203 +
Chr2	stalkie_big_nohaplotig	exon	136426296	136426599	99	+	.	Parent=FBgn0037580.1.mrna1;Target=FBgn0037580.1 204 507 +
Chr2	stalkie_big_nohaplotig	exon	136426907	136427508	99	+	.	Parent=FBgn0037580.1.mrna1;Target=FBgn0037580.1 508 1109 +
Chr2	stalkie_big_nohaplotig	exon	136427576	136427865	99	+	.	Parent=FBgn0037580.1.mrna1;Target=FBgn0037580.1 1110 1399 +
Chr2	stalkie_big_nohaplotig	exon	136427922	136428064	100	+	.	Parent=FBgn0037580.1.mrna1;Target=FBgn0037580.1 1400 1542 +
Chr2	stalkie_big_nohaplotig	exon	136428883	136429737	99	+	.	Parent=FBgn0037580.1.mrna1;Target=FBgn0037580.1 1543 2397 +
Chr2	stalkie_big_nohaplotig	CDS	136426040	136426242	.	+	0	Parent=FBgn0037580.1.mrna1;Target=FBgn0037580.1 1 203 +
Chr2	stalkie_big_nohaplotig	CDS	136426296	136426599	.	+	1	Parent=FBgn0037580.1.mrna1;Target=FBgn0037580.1 204 507 +
Chr2	stalkie_big_nohaplotig	CDS	136426907	136427508	.	+	0	Parent=FBgn0037580.1.mrna1;Target=FBgn0037580.1 508 1109 +
Chr2	stalkie_big_nohaplotig	CDS	136427576	136427865	.	+	1	Parent=FBgn0037580.1.mrna1;Target=FBgn0037580.1 1110 1399 +
Chr2	stalkie_big_nohaplotig	CDS	136427922	136428064	.	+	2	Parent=FBgn0037580.1.mrna1;Target=FBgn0037580.1 1400 1542 +
Chr2	stalkie_big_nohaplotig	CDS	136428883	136429737	.	+	0	Parent=FBgn0037580.1.mrna1;Target=FBgn0037580.1 1543 2397 +
Chr2	gffcl	locus	136429930	136563843	.	-	.	ID=RLOC_00021928;geneIDs=FBgn0005696.1.path1;transcripts=FBgn0005696.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136429930	136563843	.	-	.	ID=FBgn0005696.1.mrna1;geneID=FBgn0005696.1.path1;Name=FBgn0005696.1;Dir=sensecoverage=100.0;identity=99.6;matches=1834;mismatches=8;indels=0;unknowns=0;locus=RLOC_00021928
Chr2	stalkie_big_nohaplotig	exon	136429930	136430073	99	-	.	Parent=FBgn0005696.1.mrna1;Target=FBgn0005696.1 1699 1842 +
Chr2	stalkie_big_nohaplotig	exon	136439318	136439501	100	-	.	Parent=FBgn0005696.1.mrna1;Target=FBgn0005696.1 1515 1698 +
Chr2	stalkie_big_nohaplotig	exon	136439578	136439781	100	-	.	Parent=FBgn0005696.1.mrna1;Target=FBgn0005696.1 1311 1514 +
Chr2	stalkie_big_nohaplotig	exon	136440271	136440752	100	-	.	Parent=FBgn0005696.1.mrna1;Target=FBgn0005696.1 829 1310 +
Chr2	stalkie_big_nohaplotig	exon	136441001	136441316	100	-	.	Parent=FBgn0005696.1.mrna1;Target=FBgn0005696.1 513 828 +
Chr2	stalkie_big_nohaplotig	exon	136450217	136450290	100	-	.	Parent=FBgn0005696.1.mrna1;Target=FBgn0005696.1 439 512 +
Chr2	stalkie_big_nohaplotig	exon	136563278	136563630	98	-	.	Parent=FBgn0005696.1.mrna1;Target=FBgn0005696.1 86 438 +
Chr2	stalkie_big_nohaplotig	exon	136563759	136563843	98	-	.	Parent=FBgn0005696.1.mrna1;Target=FBgn0005696.1 1 85 +
Chr2	stalkie_big_nohaplotig	CDS	136429930	136430073	.	-	0	Parent=FBgn0005696.1.mrna1;Target=FBgn0005696.1 1699 1842 +
Chr2	stalkie_big_nohaplotig	CDS	136439318	136439501	.	-	1	Parent=FBgn0005696.1.mrna1;Target=FBgn0005696.1 1515 1698 +
Chr2	stalkie_big_nohaplotig	CDS	136439578	136439781	.	-	1	Parent=FBgn0005696.1.mrna1;Target=FBgn0005696.1 1311 1514 +
Chr2	stalkie_big_nohaplotig	CDS	136440271	136440752	.	-	0	Parent=FBgn0005696.1.mrna1;Target=FBgn0005696.1 829 1310 +
Chr2	stalkie_big_nohaplotig	CDS	136441001	136441316	.	-	1	Parent=FBgn0005696.1.mrna1;Target=FBgn0005696.1 513 828 +
Chr2	stalkie_big_nohaplotig	CDS	136450217	136450290	.	-	0	Parent=FBgn0005696.1.mrna1;Target=FBgn0005696.1 439 512 +
Chr2	stalkie_big_nohaplotig	CDS	136563278	136563630	.	-	2	Parent=FBgn0005696.1.mrna1;Target=FBgn0005696.1 86 438 +
Chr2	stalkie_big_nohaplotig	CDS	136563759	136563843	.	-	0	Parent=FBgn0005696.1.mrna1;Target=FBgn0005696.1 1 85 +
Chr2	gffcl	locus	136564108	136566321	.	.	.	ID=RLOC_00021929;geneIDs=FBgn0039126.1.path1,comp157185_c0_seq1.path1;transcripts=FBgn0039126.1.mrna1,comp157185_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136564108	136566321	.	+	.	ID=FBgn0039126.1.mrna1;geneID=FBgn0039126.1.path1;Name=FBgn0039126.1;Dir=sensecoverage=100.0;identity=98.4;matches=811;mismatches=11;indels=2;unknowns=0;locus=RLOC_00021929
Chr2	stalkie_big_nohaplotig	exon	136564108	136564269	97	+	.	Parent=FBgn0039126.1.mrna1;Target=FBgn0039126.1 1 160 +
Chr2	stalkie_big_nohaplotig	exon	136564359	136564527	100	+	.	Parent=FBgn0039126.1.mrna1;Target=FBgn0039126.1 161 329 +
Chr2	stalkie_big_nohaplotig	exon	136564594	136564736	97	+	.	Parent=FBgn0039126.1.mrna1;Target=FBgn0039126.1 330 472 +
Chr2	stalkie_big_nohaplotig	exon	136565972	136566321	98	+	.	Parent=FBgn0039126.1.mrna1;Target=FBgn0039126.1 473 822 +
Chr2	stalkie_big_nohaplotig	CDS	136564128	136564269	.	+	0	Parent=FBgn0039126.1.mrna1;Target=FBgn0039126.1 19 160 +
Chr2	stalkie_big_nohaplotig	CDS	136564359	136564527	.	+	2	Parent=FBgn0039126.1.mrna1;Target=FBgn0039126.1 161 329 +
Chr2	stalkie_big_nohaplotig	CDS	136564594	136564736	.	+	1	Parent=FBgn0039126.1.mrna1;Target=FBgn0039126.1 330 472 +
Chr2	stalkie_big_nohaplotig	CDS	136565972	136566321	.	+	2	Parent=FBgn0039126.1.mrna1;Target=FBgn0039126.1 473 822 +
Chr2	stalkie_big_nohaplotig	mRNA	136564713	136565651	.	-	.	ID=comp157185_c0_seq1.mrna1;geneID=comp157185_c0_seq1.path1;Name=comp157185_c0_seq1;Dir=indeterminatecoverage=100.0;identity=88.4;matches=875;mismatches=47;indels=68;unknowns=0;Target=comp157185_c0_seq1 973 1 .;CDS_Target=comp157185_c0_seq1 861 775 .;locus=RLOC_00021929
Chr2	stalkie_big_nohaplotig	exon	136564713	136565651	88	-	.	Parent=comp157185_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	136564825	136564911	.	-	0	Parent=comp157185_c0_seq1.mrna1
Chr2	gffcl	locus	136568367	136570261	.	-	.	ID=RLOC_00021930;geneIDs=FBgn0039125.1.path1;transcripts=FBgn0039125.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136568367	136570261	.	-	.	ID=FBgn0039125.1.mrna1;geneID=FBgn0039125.1.path1;Name=FBgn0039125.1;Dir=sensecoverage=100.0;identity=98.8;matches=1748;mismatches=22;indels=0;unknowns=0;locus=RLOC_00021930
Chr2	stalkie_big_nohaplotig	exon	136568367	136569109	99	-	.	Parent=FBgn0039125.1.mrna1;Target=FBgn0039125.1 1028 1770 +
Chr2	stalkie_big_nohaplotig	exon	136569169	136569788	98	-	.	Parent=FBgn0039125.1.mrna1;Target=FBgn0039125.1 408 1027 +
Chr2	stalkie_big_nohaplotig	exon	136569855	136570261	99	-	.	Parent=FBgn0039125.1.mrna1;Target=FBgn0039125.1 1 407 +
Chr2	stalkie_big_nohaplotig	CDS	136568367	136569109	.	-	2	Parent=FBgn0039125.1.mrna1;Target=FBgn0039125.1 1028 1770 +
Chr2	stalkie_big_nohaplotig	CDS	136569169	136569788	.	-	1	Parent=FBgn0039125.1.mrna1;Target=FBgn0039125.1 408 1027 +
Chr2	stalkie_big_nohaplotig	CDS	136569855	136570261	.	-	0	Parent=FBgn0039125.1.mrna1;Target=FBgn0039125.1 1 407 +
Chr2	gffcl	locus	136584231	136584431	.	-	.	ID=RLOC_00021931;geneIDs=comp82328_c0_seq1.path1;transcripts=comp82328_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136584231	136584431	.	-	.	ID=comp82328_c0_seq1.mrna1;geneID=comp82328_c0_seq1.path1;Name=comp82328_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=201;mismatches=0;indels=0;unknowns=0;Target=comp82328_c0_seq1 201 1 .;CDS_Target=comp82328_c0_seq1 200 3 .;locus=RLOC_00021931
Chr2	stalkie_big_nohaplotig	exon	136584231	136584431	100	-	.	Parent=comp82328_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	136584232	136584429	.	-	0	Parent=comp82328_c0_seq1.mrna1
Chr2	gffcl	locus	136823882	136828408	.	+	.	ID=RLOC_00021932;geneIDs=comp116530_c0_seq1.path1;transcripts=comp116530_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136823882	136828408	.	+	.	ID=comp116530_c0_seq1.mrna1;geneID=comp116530_c0_seq1.path1;Name=comp116530_c0_seq1;Dir=sensecoverage=98.5;identity=99.2;matches=391;mismatches=3;indels=0;unknowns=0;locus=RLOC_00021932
Chr2	stalkie_big_nohaplotig	exon	136823882	136824066	99	+	.	Parent=comp116530_c0_seq1.mrna1;Target=comp116530_c0_seq1 1 185 +
Chr2	stalkie_big_nohaplotig	exon	136825076	136825169	97	+	.	Parent=comp116530_c0_seq1.mrna1;Target=comp116530_c0_seq1 186 279 +
Chr2	stalkie_big_nohaplotig	exon	136828294	136828408	100	+	.	Parent=comp116530_c0_seq1.mrna1;Target=comp116530_c0_seq1 280 394 +
Chr2	stalkie_big_nohaplotig	CDS	136823884	136824066	.	+	0	Parent=comp116530_c0_seq1.mrna1;Target=comp116530_c0_seq1 3 185 +
Chr2	stalkie_big_nohaplotig	CDS	136825076	136825169	.	+	0	Parent=comp116530_c0_seq1.mrna1;Target=comp116530_c0_seq1 186 279 +
Chr2	stalkie_big_nohaplotig	CDS	136828294	136828406	.	+	2	Parent=comp116530_c0_seq1.mrna1;Target=comp116530_c0_seq1 280 392 +
Chr2	gffcl	locus	136841486	136843048	.	.	.	ID=RLOC_00021933;geneIDs=comp151955_c0_seq1.path1,comp161498_c0_seq1.path1;transcripts=comp161498_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136841486	136842792	.	+	.	ID=comp161498_c0_seq1.mrna1;geneID=comp161498_c0_seq1.path1;Name=comp161498_c0_seq1;Dir=indeterminatecoverage=99.3;identity=91.8;matches=1233;mismatches=44;indels=66;unknowns=0;Target=comp161498_c0_seq1 1322 10 .;CDS_Target=comp161498_c0_seq1 710 669 .;locus=RLOC_00021933
Chr2	stalkie_big_nohaplotig	exon	136841486	136842792	91	+	.	Parent=comp161498_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	136842150	136842192	.	+	0	Parent=comp161498_c0_seq1.mrna1
Chr2	gffcl	locus	136847602	136867027	.	.	.	ID=RLOC_00021934;geneIDs=FBgn0259220.1.path1,comp147803_c0_seq1.path1,comp153384_c0_seq1.path1;transcripts=FBgn0259220.1.mrna1,comp153384_c0_seq1.mrna1,comp147803_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136847602	136867027	.	-	.	ID=FBgn0259220.1.mrna1;geneID=FBgn0259220.1.path1;Name=FBgn0259220.1;Dir=sensecoverage=100.0;identity=99.5;matches=3762;mismatches=18;indels=0;unknowns=0;locus=RLOC_00021934
Chr2	stalkie_big_nohaplotig	exon	136847602	136847729	100	-	.	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 3653 3780 +
Chr2	stalkie_big_nohaplotig	exon	136848541	136848749	100	-	.	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 3444 3652 +
Chr2	stalkie_big_nohaplotig	exon	136848821	136848934	100	-	.	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 3330 3443 +
Chr2	stalkie_big_nohaplotig	exon	136848998	136849167	100	-	.	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 3160 3329 +
Chr2	stalkie_big_nohaplotig	exon	136849249	136849419	100	-	.	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 2989 3159 +
Chr2	stalkie_big_nohaplotig	exon	136849490	136849580	100	-	.	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 2898 2988 +
Chr2	stalkie_big_nohaplotig	exon	136849941	136850054	100	-	.	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 2784 2897 +
Chr2	stalkie_big_nohaplotig	exon	136850766	136850832	100	-	.	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 2717 2783 +
Chr2	stalkie_big_nohaplotig	exon	136851443	136851518	100	-	.	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 2641 2716 +
Chr2	stalkie_big_nohaplotig	exon	136854892	136856898	99	-	.	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 634 2640 +
Chr2	stalkie_big_nohaplotig	exon	136859961	136860369	99	-	.	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 225 633 +
Chr2	stalkie_big_nohaplotig	exon	136866804	136867027	100	-	.	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 1 224 +
Chr2	stalkie_big_nohaplotig	CDS	136847602	136847729	.	-	2	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 3653 3780 +
Chr2	stalkie_big_nohaplotig	CDS	136848541	136848749	.	-	1	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 3444 3652 +
Chr2	stalkie_big_nohaplotig	CDS	136848821	136848934	.	-	1	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 3330 3443 +
Chr2	stalkie_big_nohaplotig	CDS	136848998	136849167	.	-	0	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 3160 3329 +
Chr2	stalkie_big_nohaplotig	CDS	136849249	136849419	.	-	0	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 2989 3159 +
Chr2	stalkie_big_nohaplotig	CDS	136849490	136849580	.	-	1	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 2898 2988 +
Chr2	stalkie_big_nohaplotig	CDS	136849941	136850054	.	-	1	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 2784 2897 +
Chr2	stalkie_big_nohaplotig	CDS	136850766	136850832	.	-	2	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 2717 2783 +
Chr2	stalkie_big_nohaplotig	CDS	136851443	136851518	.	-	0	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 2641 2716 +
Chr2	stalkie_big_nohaplotig	CDS	136854892	136856898	.	-	0	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 634 2640 +
Chr2	stalkie_big_nohaplotig	CDS	136859961	136860369	.	-	1	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 225 633 +
Chr2	stalkie_big_nohaplotig	CDS	136866804	136867027	.	-	0	Parent=FBgn0259220.1.mrna1;Target=FBgn0259220.1 1 224 +
Chr2	stalkie_big_nohaplotig	mRNA	136847710	136848212	.	+	.	ID=comp153384_c0_seq1.mrna1;geneID=comp153384_c0_seq1.path1;Name=comp153384_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=495;mismatches=8;indels=1;unknowns=0;Target=comp153384_c0_seq1 504 1 .;CDS_Target=comp153384_c0_seq1 98 3 .;locus=RLOC_00021934
Chr2	stalkie_big_nohaplotig	exon	136847710	136848212	98	+	.	Parent=comp153384_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	136847712	136847807	.	+	0	Parent=comp153384_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136850811	136851465	.	+	.	ID=comp147803_c0_seq1.mrna1;geneID=comp147803_c0_seq1.path1;Name=comp147803_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=653;mismatches=2;indels=9;unknowns=0;Target=comp147803_c0_seq1 664 1 .;CDS_Target=comp147803_c0_seq1 524 471 .;locus=RLOC_00021934
Chr2	stalkie_big_nohaplotig	exon	136850811	136851465	98	+	.	Parent=comp147803_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	136851272	136851325	.	+	0	Parent=comp147803_c0_seq1.mrna1
Chr2	gffcl	locus	136861114	136861168	.	+	.	ID=RLOC_00021935;geneIDs=comp162702_c0_seq1.path2;transcripts=comp162702_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	136861114	136861168	.	+	.	ID=comp162702_c0_seq1.mrna2;geneID=comp162702_c0_seq1.path2;Name=comp162702_c0_seq1;Dir=indeterminatecoverage=1.1;identity=100.0;matches=55;mismatches=0;indels=0;unknowns=0;Target=comp162702_c0_seq1 4955 4901 .;locus=RLOC_00021935
Chr2	stalkie_big_nohaplotig	exon	136861114	136861168	100	+	.	Parent=comp162702_c0_seq1.mrna2
Chr2	gffcl	locus	136867198	138528492	.	.	.	ID=RLOC_00021936;geneIDs=comp157402_c0_seq1.path1,comp158793_c0_seq1.path1,comp163318_c0_seq1.path1;transcripts=comp157402_c0_seq1.mrna1,comp163318_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136867198	138527778	.	+	.	ID=comp157402_c0_seq1.mrna1;geneID=comp157402_c0_seq1.path1;Name=comp157402_c0_seq1;Dir=indeterminatecoverage=77.1;identity=98.8;matches=1099;mismatches=13;indels=0;unknowns=0;Target=comp157402_c0_seq1 419 234 .;locus=RLOC_00021936
Chr2	stalkie_big_nohaplotig	exon	136867198	136868226	98	+	.	Parent=comp157402_c0_seq1.mrna1;Target=comp157402_c0_seq1 1260 232 .
Chr2	stalkie_big_nohaplotig	exon	138479799	138479803	100	+	.	Parent=comp157402_c0_seq1.mrna1;Target=comp157402_c0_seq1 1265 1261 .
Chr2	stalkie_big_nohaplotig	exon	138486588	138486593	100	+	.	Parent=comp157402_c0_seq1.mrna1;Target=comp157402_c0_seq1 1271 1266 .
Chr2	stalkie_big_nohaplotig	exon	138490206	138490213	100	+	.	Parent=comp157402_c0_seq1.mrna1;Target=comp157402_c0_seq1 1279 1272 .
Chr2	stalkie_big_nohaplotig	exon	138494990	138494994	100	+	.	Parent=comp157402_c0_seq1.mrna1;Target=comp157402_c0_seq1 1284 1280 .
Chr2	stalkie_big_nohaplotig	exon	138500000	138500009	100	+	.	Parent=comp157402_c0_seq1.mrna1;Target=comp157402_c0_seq1 1294 1285 .
Chr2	stalkie_big_nohaplotig	exon	138504111	138504121	100	+	.	Parent=comp157402_c0_seq1.mrna1;Target=comp157402_c0_seq1 1305 1295 .
Chr2	stalkie_big_nohaplotig	exon	138517579	138517584	100	+	.	Parent=comp157402_c0_seq1.mrna1;Target=comp157402_c0_seq1 1311 1306 .
Chr2	stalkie_big_nohaplotig	exon	138522045	138522052	100	+	.	Parent=comp157402_c0_seq1.mrna1;Target=comp157402_c0_seq1 1319 1312 .
Chr2	stalkie_big_nohaplotig	exon	138523519	138523527	100	+	.	Parent=comp157402_c0_seq1.mrna1;Target=comp157402_c0_seq1 1328 1320 .
Chr2	stalkie_big_nohaplotig	exon	138525172	138525179	100	+	.	Parent=comp157402_c0_seq1.mrna1;Target=comp157402_c0_seq1 1336 1329 .
Chr2	stalkie_big_nohaplotig	exon	138527772	138527778	100	+	.	Parent=comp157402_c0_seq1.mrna1;Target=comp157402_c0_seq1 1343 1337 .
Chr2	stalkie_big_nohaplotig	CDS	136867200	136867385	.	+	0	Parent=comp157402_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138524718	138525838	.	-	.	ID=comp163318_c0_seq1.mrna1;geneID=comp163318_c0_seq1.path1;Name=comp163318_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.3;matches=1085;mismatches=32;indels=46;unknowns=0;Target=comp163318_c0_seq1 1159 1 .;CDS_Target=comp163318_c0_seq1 542 480 .;locus=RLOC_00021936
Chr2	stalkie_big_nohaplotig	exon	138524718	138525838	93	-	.	Parent=comp163318_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138525315	138525368	.	-	0	Parent=comp163318_c0_seq1.mrna1
Chr2	gffcl	locus	136869104	136869799	.	-	.	ID=RLOC_00021937;geneIDs=comp150822_c0_seq1.path1;transcripts=comp150822_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136869104	136869799	.	-	.	ID=comp150822_c0_seq1.mrna1;geneID=comp150822_c0_seq1.path1;Name=comp150822_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.6;matches=671;mismatches=25;indels=45;unknowns=0;Target=comp150822_c0_seq1 741 1 .;CDS_Target=comp150822_c0_seq1 123 1 .;locus=RLOC_00021937
Chr2	stalkie_big_nohaplotig	exon	136869104	136869799	90	-	.	Parent=comp150822_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	136869677	136869799	.	-	0	Parent=comp150822_c0_seq1.mrna1
Chr2	gffcl	locus	136879650	136880198	.	+	.	ID=RLOC_00021938;geneIDs=comp153519_c0_seq1.path1;transcripts=comp153519_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136879650	136880198	.	+	.	ID=comp153519_c0_seq1.mrna1;geneID=comp153519_c0_seq1.path1;Name=comp153519_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.6;matches=533;mismatches=13;indels=6;unknowns=0;Target=comp153519_c0_seq1 549 1 .;CDS_Target=comp153519_c0_seq1 480 328 .;locus=RLOC_00021938
Chr2	stalkie_big_nohaplotig	exon	136879650	136880198	96	+	.	Parent=comp153519_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	136879980	136880129	.	+	0	Parent=comp153519_c0_seq1.mrna1
Chr2	gffcl	locus	136881479	136890414	.	-	.	ID=RLOC_00021939;geneIDs=comp162482_c2_seq1.path1;transcripts=comp162482_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136881479	136890414	.	-	.	ID=comp162482_c2_seq1.mrna1;geneID=comp162482_c2_seq1.path1;Name=comp162482_c2_seq1;Dir=sensecoverage=99.9;identity=99.3;matches=2659;mismatches=20;indels=0;unknowns=0;Target=comp162482_c2_seq1 197 2677 +;locus=RLOC_00021939
Chr2	stalkie_big_nohaplotig	exon	136881479	136884133	99	-	.	Parent=comp162482_c2_seq1.mrna1;Target=comp162482_c2_seq1 25 2679 +
Chr2	stalkie_big_nohaplotig	exon	136890391	136890414	100	-	.	Parent=comp162482_c2_seq1.mrna1;Target=comp162482_c2_seq1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	136881481	136883961	.	-	0	Parent=comp162482_c2_seq1.mrna1
Chr2	gffcl	locus	136885027	136886517	.	-	.	ID=RLOC_00021940;geneIDs=ORF717.path1;transcripts=ORF717.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136885027	136886517	.	-	.	ID=ORF717.mrna1;geneID=ORF717.path1;Name=ORF717;Dir=indeterminatecoverage=99.7;identity=99.5;matches=1485;mismatches=6;indels=1;unknowns=0;Target=ORF717 1497 6 .;CDS_Target=ORF717 1497 7 .;locus=RLOC_00021940
Chr2	stalkie_big_nohaplotig	exon	136885027	136886517	99	-	.	Parent=ORF717.mrna1
Chr2	stalkie_big_nohaplotig	CDS	136885027	136886516	.	-	0	Parent=ORF717.mrna1
Chr2	gffcl	locus	136893498	136894367	.	+	.	ID=RLOC_00021941;geneIDs=comp142367_c0_seq1.path1;transcripts=comp142367_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136893498	136894367	.	+	.	ID=comp142367_c0_seq1.mrna1;geneID=comp142367_c0_seq1.path1;Name=comp142367_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=857;mismatches=8;indels=5;unknowns=0;Target=comp142367_c0_seq1 865 1 .;CDS_Target=comp142367_c0_seq1 803 708 .;locus=RLOC_00021941
Chr2	stalkie_big_nohaplotig	exon	136893498	136894367	98	+	.	Parent=comp142367_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	136894210	136894305	.	+	0	Parent=comp142367_c0_seq1.mrna1
Chr2	gffcl	locus	136896399	136898440	.	-	.	ID=RLOC_00021942;geneIDs=comp134700_c0_seq1.path1;transcripts=comp134700_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136896399	136898440	.	-	.	ID=comp134700_c0_seq1.mrna1;geneID=comp134700_c0_seq1.path1;Name=comp134700_c0_seq1;Dir=antisensecoverage=93.0;identity=98.0;matches=393;mismatches=8;indels=0;unknowns=0;Target=comp134700_c0_seq1 24 107 .;locus=RLOC_00021942
Chr2	stalkie_big_nohaplotig	exon	136896399	136896421	100	-	.	Parent=comp134700_c0_seq1.mrna1;Target=comp134700_c0_seq1 1 23 -
Chr2	stalkie_big_nohaplotig	exon	136898063	136898440	97	-	.	Parent=comp134700_c0_seq1.mrna1;Target=comp134700_c0_seq1 24 401 -
Chr2	stalkie_big_nohaplotig	CDS	136898063	136898146	.	-	0	Parent=comp134700_c0_seq1.mrna1
Chr2	gffcl	locus	136920025	136921547	.	+	.	ID=RLOC_00021943;geneIDs=FBgn0039130.1.path1;transcripts=FBgn0039130.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136920025	136921547	.	+	.	ID=FBgn0039130.1.mrna1;geneID=FBgn0039130.1.path1;Name=FBgn0039130.1;Dir=sensecoverage=100.0;identity=99.8;matches=1132;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021943
Chr2	stalkie_big_nohaplotig	exon	136920025	136920079	100	+	.	Parent=FBgn0039130.1.mrna1;Target=FBgn0039130.1 1 55 +
Chr2	stalkie_big_nohaplotig	exon	136920267	136920440	100	+	.	Parent=FBgn0039130.1.mrna1;Target=FBgn0039130.1 56 229 +
Chr2	stalkie_big_nohaplotig	exon	136920504	136920872	99	+	.	Parent=FBgn0039130.1.mrna1;Target=FBgn0039130.1 230 598 +
Chr2	stalkie_big_nohaplotig	exon	136920953	136921221	100	+	.	Parent=FBgn0039130.1.mrna1;Target=FBgn0039130.1 599 867 +
Chr2	stalkie_big_nohaplotig	exon	136921281	136921547	99	+	.	Parent=FBgn0039130.1.mrna1;Target=FBgn0039130.1 868 1134 +
Chr2	stalkie_big_nohaplotig	CDS	136920025	136920079	.	+	0	Parent=FBgn0039130.1.mrna1;Target=FBgn0039130.1 1 55 +
Chr2	stalkie_big_nohaplotig	CDS	136920267	136920440	.	+	2	Parent=FBgn0039130.1.mrna1;Target=FBgn0039130.1 56 229 +
Chr2	stalkie_big_nohaplotig	CDS	136920504	136920872	.	+	2	Parent=FBgn0039130.1.mrna1;Target=FBgn0039130.1 230 598 +
Chr2	stalkie_big_nohaplotig	CDS	136920953	136921221	.	+	2	Parent=FBgn0039130.1.mrna1;Target=FBgn0039130.1 599 867 +
Chr2	stalkie_big_nohaplotig	CDS	136921281	136921547	.	+	0	Parent=FBgn0039130.1.mrna1;Target=FBgn0039130.1 868 1134 +
Chr2	gffcl	locus	136923998	136941578	.	-	.	ID=RLOC_00021944;geneIDs=FBgn0001098.1.path1;transcripts=FBgn0001098.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136923998	136941578	.	-	.	ID=FBgn0001098.1.mrna1;geneID=FBgn0001098.1.path1;Name=FBgn0001098.1;Dir=sensecoverage=100.0;identity=99.6;matches=1656;mismatches=6;indels=0;unknowns=0;locus=RLOC_00021944
Chr2	stalkie_big_nohaplotig	exon	136923998	136924266	99	-	.	Parent=FBgn0001098.1.mrna1;Target=FBgn0001098.1 1394 1662 +
Chr2	stalkie_big_nohaplotig	exon	136925540	136925744	100	-	.	Parent=FBgn0001098.1.mrna1;Target=FBgn0001098.1 1189 1393 +
Chr2	stalkie_big_nohaplotig	exon	136925820	136925981	99	-	.	Parent=FBgn0001098.1.mrna1;Target=FBgn0001098.1 1027 1188 +
Chr2	stalkie_big_nohaplotig	exon	136927110	136927267	100	-	.	Parent=FBgn0001098.1.mrna1;Target=FBgn0001098.1 869 1026 +
Chr2	stalkie_big_nohaplotig	exon	136927337	136927771	99	-	.	Parent=FBgn0001098.1.mrna1;Target=FBgn0001098.1 434 868 +
Chr2	stalkie_big_nohaplotig	exon	136941146	136941578	99	-	.	Parent=FBgn0001098.1.mrna1;Target=FBgn0001098.1 1 433 +
Chr2	stalkie_big_nohaplotig	CDS	136923998	136924266	.	-	2	Parent=FBgn0001098.1.mrna1;Target=FBgn0001098.1 1394 1662 +
Chr2	stalkie_big_nohaplotig	CDS	136925540	136925744	.	-	0	Parent=FBgn0001098.1.mrna1;Target=FBgn0001098.1 1189 1393 +
Chr2	stalkie_big_nohaplotig	CDS	136925820	136925981	.	-	0	Parent=FBgn0001098.1.mrna1;Target=FBgn0001098.1 1027 1188 +
Chr2	stalkie_big_nohaplotig	CDS	136927110	136927267	.	-	2	Parent=FBgn0001098.1.mrna1;Target=FBgn0001098.1 869 1026 +
Chr2	stalkie_big_nohaplotig	CDS	136927337	136927771	.	-	2	Parent=FBgn0001098.1.mrna1;Target=FBgn0001098.1 434 868 +
Chr2	stalkie_big_nohaplotig	CDS	136941146	136941578	.	-	0	Parent=FBgn0001098.1.mrna1;Target=FBgn0001098.1 1 433 +
Chr2	gffcl	locus	136944814	136950156	.	+	.	ID=RLOC_00021945;geneIDs=FBgn0040493.1.path1;transcripts=FBgn0040493.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	136944814	136950156	.	+	.	ID=FBgn0040493.1.mrna1;geneID=FBgn0040493.1.path1;Name=FBgn0040493.1;Dir=sensecoverage=76.5;identity=99.6;matches=1361;mismatches=5;indels=0;unknowns=0;locus=RLOC_00021945
Chr2	stalkie_big_nohaplotig	exon	136944814	136945008	99	+	.	Parent=FBgn0040493.1.mrna1;Target=FBgn0040493.1 1 195 +
Chr2	stalkie_big_nohaplotig	exon	136948922	136949931	99	+	.	Parent=FBgn0040493.1.mrna1;Target=FBgn0040493.1 196 1205 +
Chr2	stalkie_big_nohaplotig	exon	136949996	136950156	99	+	.	Parent=FBgn0040493.1.mrna1;Target=FBgn0040493.1 1206 1366 +
Chr2	stalkie_big_nohaplotig	CDS	136944814	136945008	.	+	0	Parent=FBgn0040493.1.mrna1;Target=FBgn0040493.1 1 195 +
Chr2	stalkie_big_nohaplotig	CDS	136948922	136949931	.	+	0	Parent=FBgn0040493.1.mrna1;Target=FBgn0040493.1 196 1205 +
Chr2	stalkie_big_nohaplotig	CDS	136949996	136950155	.	+	1	Parent=FBgn0040493.1.mrna1;Target=FBgn0040493.1 1206 1365 +
Chr2	gffcl	locus	137017667	137018300	.	+	.	ID=RLOC_00021946;geneIDs=comp154101_c0_seq1.path2;transcripts=comp154101_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	137017667	137018300	.	+	.	ID=comp154101_c0_seq1.mrna2;geneID=comp154101_c0_seq1.path2;Name=comp154101_c0_seq1;Dir=sensecoverage=97.2;identity=97.6;matches=569;mismatches=9;indels=5;unknowns=0;locus=RLOC_00021946
Chr2	stalkie_big_nohaplotig	exon	137017667	137017804	96	+	.	Parent=comp154101_c0_seq1.mrna2;Target=comp154101_c0_seq1 18 156 +
Chr2	stalkie_big_nohaplotig	exon	137017859	137018300	97	+	.	Parent=comp154101_c0_seq1.mrna2;Target=comp154101_c0_seq1 157 598 +
Chr2	stalkie_big_nohaplotig	CDS	137017691	137017804	.	+	0	Parent=comp154101_c0_seq1.mrna2;Target=comp154101_c0_seq1 40 156 +
Chr2	stalkie_big_nohaplotig	CDS	137017859	137017873	.	+	0	Parent=comp154101_c0_seq1.mrna2;Target=comp154101_c0_seq1 157 171 +
Chr2	gffcl	locus	137058629	137060668	.	-	.	ID=RLOC_00021947;geneIDs=FBgn0027578.1.path1;transcripts=FBgn0027578.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137058629	137060668	.	-	.	ID=FBgn0027578.1.mrna1;geneID=FBgn0027578.1.path1;Name=FBgn0027578.1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=2013;mismatches=27;indels=0;unknowns=0;Target=FBgn0027578.1 2040 1 .;locus=RLOC_00021947
Chr2	stalkie_big_nohaplotig	exon	137058629	137060668	98	-	.	Parent=FBgn0027578.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137058629	137060668	.	-	0	Parent=FBgn0027578.1.mrna1
Chr2	gffcl	locus	137070974	137139763	.	+	.	ID=RLOC_00021948;geneIDs=FBgn0053203.1.path1,comp155009_c1_seq1.path1;transcripts=FBgn0053203.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137070974	137139763	.	+	.	ID=FBgn0053203.1.mrna1;geneID=FBgn0053203.1.path1;Name=FBgn0053203.1;Dir=sensecoverage=100.0;identity=99.2;matches=1385;mismatches=5;indels=6;unknowns=2;locus=RLOC_00021948
Chr2	stalkie_big_nohaplotig	exon	137070974	137071667	98	+	.	Parent=FBgn0053203.1.mrna1;Target=FBgn0053203.1 1 688 +
Chr2	stalkie_big_nohaplotig	exon	137105403	137105618	100	+	.	Parent=FBgn0053203.1.mrna1;Target=FBgn0053203.1 689 904 +
Chr2	stalkie_big_nohaplotig	exon	137126504	137126607	99	+	.	Parent=FBgn0053203.1.mrna1;Target=FBgn0053203.1 905 1008 +
Chr2	stalkie_big_nohaplotig	exon	137129813	137129950	100	+	.	Parent=FBgn0053203.1.mrna1;Target=FBgn0053203.1 1009 1146 +
Chr2	stalkie_big_nohaplotig	exon	137137304	137137444	100	+	.	Parent=FBgn0053203.1.mrna1;Target=FBgn0053203.1 1147 1287 +
Chr2	stalkie_big_nohaplotig	exon	137139659	137139763	99	+	.	Parent=FBgn0053203.1.mrna1;Target=FBgn0053203.1 1288 1392 +
Chr2	stalkie_big_nohaplotig	CDS	137070974	137071667	.	+	0	Parent=FBgn0053203.1.mrna1;Target=FBgn0053203.1 1 688 +
Chr2	stalkie_big_nohaplotig	CDS	137105403	137105618	.	+	2	Parent=FBgn0053203.1.mrna1;Target=FBgn0053203.1 689 904 +
Chr2	stalkie_big_nohaplotig	CDS	137126504	137126607	.	+	2	Parent=FBgn0053203.1.mrna1;Target=FBgn0053203.1 905 1008 +
Chr2	stalkie_big_nohaplotig	CDS	137129813	137129950	.	+	0	Parent=FBgn0053203.1.mrna1;Target=FBgn0053203.1 1009 1146 +
Chr2	stalkie_big_nohaplotig	CDS	137137304	137137444	.	+	0	Parent=FBgn0053203.1.mrna1;Target=FBgn0053203.1 1147 1287 +
Chr2	stalkie_big_nohaplotig	CDS	137139659	137139763	.	+	0	Parent=FBgn0053203.1.mrna1;Target=FBgn0053203.1 1288 1392 +
Chr2	gffcl	locus	137075224	137076376	.	-	.	ID=RLOC_00021949;geneIDs=comp162844_c0_seq1.path1;transcripts=comp162844_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137075224	137076376	.	-	.	ID=comp162844_c0_seq1.mrna1;geneID=comp162844_c0_seq1.path1;Name=comp162844_c0_seq1;Dir=indeterminatecoverage=55.5;identity=96.0;matches=1107;mismatches=46;indels=0;unknowns=0;Target=comp162844_c0_seq1 1176 24 .;CDS_Target=comp162844_c0_seq1 1174 47 .;locus=RLOC_00021949
Chr2	stalkie_big_nohaplotig	exon	137075224	137076376	96	-	.	Parent=comp162844_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137075226	137076353	.	-	0	Parent=comp162844_c0_seq1.mrna1
Chr2	gffcl	locus	137078180	137080414	.	+	.	ID=RLOC_00021950;geneIDs=FBgn0039613.1.path1;transcripts=FBgn0039613.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137078180	137080414	.	+	.	ID=FBgn0039613.1.mrna1;geneID=FBgn0039613.1.path1;Name=FBgn0039613.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=2226;mismatches=6;indels=0;unknowns=3;Target=FBgn0039613.1 2235 1 .;locus=RLOC_00021950
Chr2	stalkie_big_nohaplotig	exon	137078180	137080414	99	+	.	Parent=FBgn0039613.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137078180	137080414	.	+	0	Parent=FBgn0039613.1.mrna1
Chr2	gffcl	locus	137093123	137095240	.	-	.	ID=RLOC_00021951;geneIDs=FBgn0039611.1.path1;transcripts=FBgn0039611.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137093123	137095240	.	-	.	ID=FBgn0039611.1.mrna1;geneID=FBgn0039611.1.path1;Name=FBgn0039611.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=2112;mismatches=6;indels=0;unknowns=0;Target=FBgn0039611.1 2118 1 .;locus=RLOC_00021951
Chr2	stalkie_big_nohaplotig	exon	137093123	137095240	99	-	.	Parent=FBgn0039611.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137093123	137095240	.	-	0	Parent=FBgn0039611.1.mrna1
Chr2	gffcl	locus	137103303	137103494	.	-	.	ID=RLOC_00021952;geneIDs=comp145883_c0_seq1.path1;transcripts=comp145883_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137103303	137103494	.	-	.	ID=comp145883_c0_seq1.mrna1;geneID=comp145883_c0_seq1.path1;Name=comp145883_c0_seq1;Dir=indeterminatecoverage=83.5;identity=99.0;matches=190;mismatches=2;indels=0;unknowns=0;Target=comp145883_c0_seq1 227 36 .;CDS_Target=comp145883_c0_seq1 108 37 .;locus=RLOC_00021952
Chr2	stalkie_big_nohaplotig	exon	137103303	137103494	98	-	.	Parent=comp145883_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137103422	137103493	.	-	0	Parent=comp145883_c0_seq1.mrna1
Chr2	gffcl	locus	137113278	137115359	.	-	.	ID=RLOC_00021953;geneIDs=FBgn0039613.2.path1;transcripts=FBgn0039613.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137113278	137115359	.	-	.	ID=FBgn0039613.2.mrna1;geneID=FBgn0039613.2.path1;Name=FBgn0039613.2;Dir=indeterminatecoverage=100.0;identity=99.4;matches=2069;mismatches=13;indels=0;unknowns=0;Target=FBgn0039613.2 2082 1 .;locus=RLOC_00021953
Chr2	stalkie_big_nohaplotig	exon	137113278	137115359	99	-	.	Parent=FBgn0039613.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137113278	137115359	.	-	0	Parent=FBgn0039613.2.mrna1
Chr2	gffcl	locus	137131966	137132823	.	+	.	ID=RLOC_00021954;geneIDs=comp159867_c0_seq1.path1;transcripts=comp159867_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137131966	137132823	.	+	.	ID=comp159867_c0_seq1.mrna1;geneID=comp159867_c0_seq1.path1;Name=comp159867_c0_seq1;Dir=indeterminatecoverage=100.0;identity=87.6;matches=779;mismatches=35;indels=75;unknowns=0;Target=comp159867_c0_seq1 845 1 .;CDS_Target=comp159867_c0_seq1 244 131 .;locus=RLOC_00021954
Chr2	stalkie_big_nohaplotig	exon	137131966	137132823	87	+	.	Parent=comp159867_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137132124	137132237	.	+	0	Parent=comp159867_c0_seq1.mrna1
Chr2	gffcl	locus	137133696	137134211	.	-	.	ID=RLOC_00021955;geneIDs=comp148717_c0_seq1.path1;transcripts=comp148717_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137133696	137134211	.	-	.	ID=comp148717_c0_seq1.mrna1;geneID=comp148717_c0_seq1.path1;Name=comp148717_c0_seq1;Dir=indeterminatecoverage=96.6;identity=96.5;matches=498;mismatches=18;indels=0;unknowns=0;Target=comp148717_c0_seq1 518 3 .;CDS_Target=comp148717_c0_seq1 358 5 .;locus=RLOC_00021955
Chr2	stalkie_big_nohaplotig	exon	137133696	137134211	96	-	.	Parent=comp148717_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137133856	137134209	.	-	0	Parent=comp148717_c0_seq1.mrna1
Chr2	gffcl	locus	137136208	137136736	.	-	.	ID=RLOC_00021956;geneIDs=comp153699_c0_seq1.path1;transcripts=comp153699_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137136208	137136736	.	-	.	ID=comp153699_c0_seq1.mrna1;geneID=comp153699_c0_seq1.path1;Name=comp153699_c0_seq1;Dir=indeterminatecoverage=98.3;identity=95.8;matches=507;mismatches=14;indels=8;unknowns=0;Target=comp153699_c0_seq1 530 10 .;CDS_Target=comp153699_c0_seq1 224 12 .;locus=RLOC_00021956
Chr2	stalkie_big_nohaplotig	exon	137136208	137136736	95	-	.	Parent=comp153699_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137136522	137136734	.	-	0	Parent=comp153699_c0_seq1.mrna1
Chr2	gffcl	locus	137142345	137143598	.	+	.	ID=RLOC_00021957;geneIDs=FBgn0039360.1.path1;transcripts=FBgn0039360.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137142345	137143598	.	+	.	ID=FBgn0039360.1.mrna1;geneID=FBgn0039360.1.path1;Name=FBgn0039360.1;Dir=sensecoverage=100.0;identity=99.5;matches=1039;mismatches=5;indels=0;unknowns=0;locus=RLOC_00021957
Chr2	stalkie_big_nohaplotig	exon	137142345	137142917	100	+	.	Parent=FBgn0039360.1.mrna1;Target=FBgn0039360.1 1 573 +
Chr2	stalkie_big_nohaplotig	exon	137142977	137143192	100	+	.	Parent=FBgn0039360.1.mrna1;Target=FBgn0039360.1 574 789 +
Chr2	stalkie_big_nohaplotig	exon	137143284	137143419	97	+	.	Parent=FBgn0039360.1.mrna1;Target=FBgn0039360.1 790 925 +
Chr2	stalkie_big_nohaplotig	exon	137143480	137143598	98	+	.	Parent=FBgn0039360.1.mrna1;Target=FBgn0039360.1 926 1044 +
Chr2	stalkie_big_nohaplotig	CDS	137142345	137142917	.	+	0	Parent=FBgn0039360.1.mrna1;Target=FBgn0039360.1 1 573 +
Chr2	stalkie_big_nohaplotig	CDS	137142977	137143192	.	+	0	Parent=FBgn0039360.1.mrna1;Target=FBgn0039360.1 574 789 +
Chr2	stalkie_big_nohaplotig	CDS	137143284	137143419	.	+	0	Parent=FBgn0039360.1.mrna1;Target=FBgn0039360.1 790 925 +
Chr2	stalkie_big_nohaplotig	CDS	137143480	137143598	.	+	2	Parent=FBgn0039360.1.mrna1;Target=FBgn0039360.1 926 1044 +
Chr2	gffcl	locus	137144455	137146504	.	-	.	ID=RLOC_00021958;geneIDs=FBgn0027583.1.path1;transcripts=FBgn0027583.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137144455	137146504	.	-	.	ID=FBgn0027583.1.mrna1;geneID=FBgn0027583.1.path1;Name=FBgn0027583.1;Dir=sensecoverage=100.0;identity=98.9;matches=1080;mismatches=12;indels=0;unknowns=0;locus=RLOC_00021958
Chr2	stalkie_big_nohaplotig	exon	137144455	137144672	96	-	.	Parent=FBgn0027583.1.mrna1;Target=FBgn0027583.1 875 1092 +
Chr2	stalkie_big_nohaplotig	exon	137144729	137144974	99	-	.	Parent=FBgn0027583.1.mrna1;Target=FBgn0027583.1 629 874 +
Chr2	stalkie_big_nohaplotig	exon	137145756	137145975	99	-	.	Parent=FBgn0027583.1.mrna1;Target=FBgn0027583.1 409 628 +
Chr2	stalkie_big_nohaplotig	exon	137146035	137146178	98	-	.	Parent=FBgn0027583.1.mrna1;Target=FBgn0027583.1 265 408 +
Chr2	stalkie_big_nohaplotig	exon	137146241	137146504	100	-	.	Parent=FBgn0027583.1.mrna1;Target=FBgn0027583.1 1 264 +
Chr2	stalkie_big_nohaplotig	CDS	137144455	137144672	.	-	2	Parent=FBgn0027583.1.mrna1;Target=FBgn0027583.1 875 1092 +
Chr2	stalkie_big_nohaplotig	CDS	137144729	137144974	.	-	2	Parent=FBgn0027583.1.mrna1;Target=FBgn0027583.1 629 874 +
Chr2	stalkie_big_nohaplotig	CDS	137145756	137145975	.	-	0	Parent=FBgn0027583.1.mrna1;Target=FBgn0027583.1 409 628 +
Chr2	stalkie_big_nohaplotig	CDS	137146035	137146178	.	-	0	Parent=FBgn0027583.1.mrna1;Target=FBgn0027583.1 265 408 +
Chr2	stalkie_big_nohaplotig	CDS	137146241	137146504	.	-	0	Parent=FBgn0027583.1.mrna1;Target=FBgn0027583.1 1 264 +
Chr2	gffcl	locus	137146701	137147768	.	+	.	ID=RLOC_00021959;geneIDs=FBgn0039689.1.path1;transcripts=FBgn0039689.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137146701	137147768	.	+	.	ID=FBgn0039689.1.mrna1;geneID=FBgn0039689.1.path1;Name=FBgn0039689.1;Dir=sensecoverage=100.0;identity=99.9;matches=938;mismatches=1;indels=0;unknowns=0;locus=RLOC_00021959
Chr2	stalkie_big_nohaplotig	exon	137146701	137147225	100	+	.	Parent=FBgn0039689.1.mrna1;Target=FBgn0039689.1 1 525 +
Chr2	stalkie_big_nohaplotig	exon	137147283	137147468	100	+	.	Parent=FBgn0039689.1.mrna1;Target=FBgn0039689.1 526 711 +
Chr2	stalkie_big_nohaplotig	exon	137147541	137147768	99	+	.	Parent=FBgn0039689.1.mrna1;Target=FBgn0039689.1 712 939 +
Chr2	stalkie_big_nohaplotig	CDS	137146701	137147225	.	+	0	Parent=FBgn0039689.1.mrna1;Target=FBgn0039689.1 1 525 +
Chr2	stalkie_big_nohaplotig	CDS	137147283	137147468	.	+	0	Parent=FBgn0039689.1.mrna1;Target=FBgn0039689.1 526 711 +
Chr2	stalkie_big_nohaplotig	CDS	137147541	137147768	.	+	0	Parent=FBgn0039689.1.mrna1;Target=FBgn0039689.1 712 939 +
Chr2	gffcl	locus	137149630	137155109	.	+	.	ID=RLOC_00021960;geneIDs=FBgn0039690.1.path1,comp134847_c0_seq1.path1;transcripts=FBgn0039690.1.mrna1,comp134847_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137149630	137155109	.	+	.	ID=FBgn0039690.1.mrna1;geneID=FBgn0039690.1.path1;Name=FBgn0039690.1;Dir=sensecoverage=100.0;identity=99.4;matches=695;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021960
Chr2	stalkie_big_nohaplotig	exon	137149630	137149665	100	+	.	Parent=FBgn0039690.1.mrna1;Target=FBgn0039690.1 1 36 +
Chr2	stalkie_big_nohaplotig	exon	137152727	137152937	99	+	.	Parent=FBgn0039690.1.mrna1;Target=FBgn0039690.1 37 247 +
Chr2	stalkie_big_nohaplotig	exon	137154000	137154127	100	+	.	Parent=FBgn0039690.1.mrna1;Target=FBgn0039690.1 248 375 +
Chr2	stalkie_big_nohaplotig	exon	137154192	137154253	98	+	.	Parent=FBgn0039690.1.mrna1;Target=FBgn0039690.1 376 437 +
Chr2	stalkie_big_nohaplotig	exon	137154337	137154559	99	+	.	Parent=FBgn0039690.1.mrna1;Target=FBgn0039690.1 438 660 +
Chr2	stalkie_big_nohaplotig	exon	137155071	137155109	100	+	.	Parent=FBgn0039690.1.mrna1;Target=FBgn0039690.1 661 699 +
Chr2	stalkie_big_nohaplotig	CDS	137149630	137149665	.	+	0	Parent=FBgn0039690.1.mrna1;Target=FBgn0039690.1 1 36 +
Chr2	stalkie_big_nohaplotig	CDS	137152727	137152937	.	+	0	Parent=FBgn0039690.1.mrna1;Target=FBgn0039690.1 37 247 +
Chr2	stalkie_big_nohaplotig	CDS	137154000	137154127	.	+	2	Parent=FBgn0039690.1.mrna1;Target=FBgn0039690.1 248 375 +
Chr2	stalkie_big_nohaplotig	CDS	137154192	137154253	.	+	0	Parent=FBgn0039690.1.mrna1;Target=FBgn0039690.1 376 437 +
Chr2	stalkie_big_nohaplotig	CDS	137154337	137154559	.	+	1	Parent=FBgn0039690.1.mrna1;Target=FBgn0039690.1 438 660 +
Chr2	stalkie_big_nohaplotig	CDS	137155071	137155109	.	+	0	Parent=FBgn0039690.1.mrna1;Target=FBgn0039690.1 661 699 +
Chr2	stalkie_big_nohaplotig	mRNA	137152289	137152750	.	+	.	ID=comp134847_c0_seq1.mrna1;geneID=comp134847_c0_seq1.path1;Name=comp134847_c0_seq1;Dir=antisensecoverage=100.0;identity=99.2;matches=244;mismatches=2;indels=0;unknowns=0;Target=comp134847_c0_seq1 99 245 .;locus=RLOC_00021960
Chr2	stalkie_big_nohaplotig	exon	137152289	137152510	99	+	.	Parent=comp134847_c0_seq1.mrna1;Target=comp134847_c0_seq1 25 246 -
Chr2	stalkie_big_nohaplotig	exon	137152727	137152750	100	+	.	Parent=comp134847_c0_seq1.mrna1;Target=comp134847_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	CDS	137152290	137152436	.	+	0	Parent=comp134847_c0_seq1.mrna1
Chr2	gffcl	locus	137157215	137160519	.	-	.	ID=RLOC_00021961;geneIDs=FBgn0027518.1.path1;transcripts=FBgn0027518.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137157215	137160519	.	-	.	ID=FBgn0027518.1.mrna1;geneID=FBgn0027518.1.path1;Name=FBgn0027518.1;Dir=sensecoverage=100.0;identity=99.1;matches=2333;mismatches=22;indels=0;unknowns=0;locus=RLOC_00021961
Chr2	stalkie_big_nohaplotig	exon	137157215	137157568	99	-	.	Parent=FBgn0027518.1.mrna1;Target=FBgn0027518.1 2002 2355 +
Chr2	stalkie_big_nohaplotig	exon	137157635	137157820	100	-	.	Parent=FBgn0027518.1.mrna1;Target=FBgn0027518.1 1816 2001 +
Chr2	stalkie_big_nohaplotig	exon	137157977	137158465	98	-	.	Parent=FBgn0027518.1.mrna1;Target=FBgn0027518.1 1327 1815 +
Chr2	stalkie_big_nohaplotig	exon	137158525	137158677	100	-	.	Parent=FBgn0027518.1.mrna1;Target=FBgn0027518.1 1174 1326 +
Chr2	stalkie_big_nohaplotig	exon	137158745	137158826	98	-	.	Parent=FBgn0027518.1.mrna1;Target=FBgn0027518.1 1092 1173 +
Chr2	stalkie_big_nohaplotig	exon	137158888	137159217	97	-	.	Parent=FBgn0027518.1.mrna1;Target=FBgn0027518.1 762 1091 +
Chr2	stalkie_big_nohaplotig	exon	137159326	137159414	100	-	.	Parent=FBgn0027518.1.mrna1;Target=FBgn0027518.1 673 761 +
Chr2	stalkie_big_nohaplotig	exon	137159730	137159841	100	-	.	Parent=FBgn0027518.1.mrna1;Target=FBgn0027518.1 561 672 +
Chr2	stalkie_big_nohaplotig	exon	137159895	137160336	99	-	.	Parent=FBgn0027518.1.mrna1;Target=FBgn0027518.1 119 560 +
Chr2	stalkie_big_nohaplotig	exon	137160402	137160519	100	-	.	Parent=FBgn0027518.1.mrna1;Target=FBgn0027518.1 1 118 +
Chr2	stalkie_big_nohaplotig	CDS	137157215	137157568	.	-	0	Parent=FBgn0027518.1.mrna1;Target=FBgn0027518.1 2002 2355 +
Chr2	stalkie_big_nohaplotig	CDS	137157635	137157820	.	-	0	Parent=FBgn0027518.1.mrna1;Target=FBgn0027518.1 1816 2001 +
Chr2	stalkie_big_nohaplotig	CDS	137157977	137158465	.	-	0	Parent=FBgn0027518.1.mrna1;Target=FBgn0027518.1 1327 1815 +
Chr2	stalkie_big_nohaplotig	CDS	137158525	137158677	.	-	0	Parent=FBgn0027518.1.mrna1;Target=FBgn0027518.1 1174 1326 +
Chr2	stalkie_big_nohaplotig	CDS	137158745	137158826	.	-	1	Parent=FBgn0027518.1.mrna1;Target=FBgn0027518.1 1092 1173 +
Chr2	stalkie_big_nohaplotig	CDS	137158888	137159217	.	-	1	Parent=FBgn0027518.1.mrna1;Target=FBgn0027518.1 762 1091 +
Chr2	stalkie_big_nohaplotig	CDS	137159326	137159414	.	-	0	Parent=FBgn0027518.1.mrna1;Target=FBgn0027518.1 673 761 +
Chr2	stalkie_big_nohaplotig	CDS	137159730	137159841	.	-	1	Parent=FBgn0027518.1.mrna1;Target=FBgn0027518.1 561 672 +
Chr2	stalkie_big_nohaplotig	CDS	137159895	137160336	.	-	2	Parent=FBgn0027518.1.mrna1;Target=FBgn0027518.1 119 560 +
Chr2	stalkie_big_nohaplotig	CDS	137160402	137160519	.	-	0	Parent=FBgn0027518.1.mrna1;Target=FBgn0027518.1 1 118 +
Chr2	gffcl	locus	137161374	137168064	.	+	.	ID=RLOC_00021962;geneIDs=FBgn0260990.1.path1;transcripts=FBgn0260990.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137161374	137168064	.	+	.	ID=FBgn0260990.1.mrna1;geneID=FBgn0260990.1.path1;Name=FBgn0260990.1;Dir=sensecoverage=100.0;identity=99.5;matches=2637;mismatches=12;indels=0;unknowns=0;locus=RLOC_00021962
Chr2	stalkie_big_nohaplotig	exon	137161374	137161826	99	+	.	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 1 453 +
Chr2	stalkie_big_nohaplotig	exon	137162014	137162237	97	+	.	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 454 677 +
Chr2	stalkie_big_nohaplotig	exon	137162311	137162637	99	+	.	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 678 1004 +
Chr2	stalkie_big_nohaplotig	exon	137162709	137162787	100	+	.	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 1005 1083 +
Chr2	stalkie_big_nohaplotig	exon	137164098	137164319	100	+	.	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 1084 1305 +
Chr2	stalkie_big_nohaplotig	exon	137164381	137164536	100	+	.	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 1306 1461 +
Chr2	stalkie_big_nohaplotig	exon	137164602	137164717	100	+	.	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 1462 1577 +
Chr2	stalkie_big_nohaplotig	exon	137165701	137165849	100	+	.	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 1578 1726 +
Chr2	stalkie_big_nohaplotig	exon	137166259	137166423	100	+	.	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 1727 1891 +
Chr2	stalkie_big_nohaplotig	exon	137166950	137167095	99	+	.	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 1892 2037 +
Chr2	stalkie_big_nohaplotig	exon	137167310	137167438	100	+	.	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 2038 2166 +
Chr2	stalkie_big_nohaplotig	exon	137167505	137167862	100	+	.	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 2167 2524 +
Chr2	stalkie_big_nohaplotig	exon	137167940	137168064	99	+	.	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 2525 2649 +
Chr2	stalkie_big_nohaplotig	CDS	137161374	137161826	.	+	0	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 1 453 +
Chr2	stalkie_big_nohaplotig	CDS	137162014	137162237	.	+	0	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 454 677 +
Chr2	stalkie_big_nohaplotig	CDS	137162311	137162637	.	+	1	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 678 1004 +
Chr2	stalkie_big_nohaplotig	CDS	137162709	137162787	.	+	1	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 1005 1083 +
Chr2	stalkie_big_nohaplotig	CDS	137164098	137164319	.	+	0	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 1084 1305 +
Chr2	stalkie_big_nohaplotig	CDS	137164381	137164536	.	+	0	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 1306 1461 +
Chr2	stalkie_big_nohaplotig	CDS	137164602	137164717	.	+	0	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 1462 1577 +
Chr2	stalkie_big_nohaplotig	CDS	137165701	137165849	.	+	1	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 1578 1726 +
Chr2	stalkie_big_nohaplotig	CDS	137166259	137166423	.	+	2	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 1727 1891 +
Chr2	stalkie_big_nohaplotig	CDS	137166950	137167095	.	+	2	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 1892 2037 +
Chr2	stalkie_big_nohaplotig	CDS	137167310	137167438	.	+	0	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 2038 2166 +
Chr2	stalkie_big_nohaplotig	CDS	137167505	137167862	.	+	0	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 2167 2524 +
Chr2	stalkie_big_nohaplotig	CDS	137167940	137168064	.	+	2	Parent=FBgn0260990.1.mrna1;Target=FBgn0260990.1 2525 2649 +
Chr2	gffcl	locus	137169708	137170810	.	-	.	ID=RLOC_00021963;geneIDs=comp156952_c0_seq1.path1;transcripts=comp156952_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137169708	137170810	.	-	.	ID=comp156952_c0_seq1.mrna1;geneID=comp156952_c0_seq1.path1;Name=comp156952_c0_seq1;Dir=indeterminatecoverage=100.0;identity=88.6;matches=1021;mismatches=66;indels=65;unknowns=0;Target=comp156952_c0_seq1 1136 1 .;CDS_Target=comp156952_c0_seq1 101 3 .;locus=RLOC_00021963
Chr2	stalkie_big_nohaplotig	exon	137169708	137170810	88	-	.	Parent=comp156952_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137170710	137170808	.	-	0	Parent=comp156952_c0_seq1.mrna1
Chr2	gffcl	locus	137171042	137172714	.	-	.	ID=RLOC_00021964;geneIDs=comp160746_c0_seq1.path1;transcripts=comp160746_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137171042	137172714	.	-	.	ID=comp160746_c0_seq1.mrna1;geneID=comp160746_c0_seq1.path1;Name=comp160746_c0_seq1;Dir=indeterminatecoverage=99.9;identity=93.1;matches=1606;mismatches=60;indels=59;unknowns=0;Target=comp160746_c0_seq1 1720 3 .;CDS_Target=comp160746_c0_seq1 382 254 .;locus=RLOC_00021964
Chr2	stalkie_big_nohaplotig	exon	137171042	137172714	93	-	.	Parent=comp160746_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137172335	137172463	.	-	0	Parent=comp160746_c0_seq1.mrna1
Chr2	gffcl	locus	137173957	137174186	.	+	.	ID=RLOC_00021965;geneIDs=comp136909_c0_seq1.path1;transcripts=comp136909_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137173957	137174186	.	+	.	ID=comp136909_c0_seq1.mrna1;geneID=comp136909_c0_seq1.path1;Name=comp136909_c0_seq1;Dir=indeterminatecoverage=95.8;identity=100.0;matches=230;mismatches=0;indels=0;unknowns=0;Target=comp136909_c0_seq1 240 11 .;CDS_Target=comp136909_c0_seq1 141 13 .;locus=RLOC_00021965
Chr2	stalkie_big_nohaplotig	exon	137173957	137174186	100	+	.	Parent=comp136909_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137173959	137174087	.	+	0	Parent=comp136909_c0_seq1.mrna1
Chr2	gffcl	locus	137200460	137200691	.	+	.	ID=RLOC_00021966;geneIDs=comp46785_c0_seq1.path1;transcripts=comp46785_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137200460	137200691	.	+	.	ID=comp46785_c0_seq1.mrna1;geneID=comp46785_c0_seq1.path1;Name=comp46785_c0_seq1;Dir=indeterminatecoverage=90.9;identity=98.7;matches=229;mismatches=0;indels=3;unknowns=0;Target=comp46785_c0_seq1 229 1 .;CDS_Target=comp46785_c0_seq1 229 2 .;locus=RLOC_00021966
Chr2	stalkie_big_nohaplotig	exon	137200460	137200691	98	+	.	Parent=comp46785_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137200461	137200691	.	+	0	Parent=comp46785_c0_seq1.mrna1
Chr2	gffcl	locus	137247118	137247703	.	.	.	ID=RLOC_00021967;geneIDs=comp135138_c1_seq1.path1,comp135138_c1_seq1.path2;transcripts=comp135138_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	137247118	137247703	.	-	.	ID=comp135138_c1_seq1.mrna2;geneID=comp135138_c1_seq1.path2;Name=comp135138_c1_seq1;Dir=indeterminatecoverage=93.1;identity=97.6;matches=573;mismatches=4;indels=10;unknowns=0;Target=comp135138_c1_seq1 621 44 .;CDS_Target=comp135138_c1_seq1 160 44 .;locus=RLOC_00021967
Chr2	stalkie_big_nohaplotig	exon	137247118	137247703	97	-	.	Parent=comp135138_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	137247587	137247703	.	-	0	Parent=comp135138_c1_seq1.mrna2
Chr2	gffcl	locus	137247837	137248077	.	-	.	ID=RLOC_00021968;geneIDs=comp85196_c0_seq1.path1;transcripts=comp85196_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137247837	137248077	.	-	.	ID=comp85196_c0_seq1.mrna1;geneID=comp85196_c0_seq1.path1;Name=comp85196_c0_seq1;Dir=indeterminatecoverage=91.3;identity=99.6;matches=240;mismatches=1;indels=0;unknowns=0;Target=comp85196_c0_seq1 264 24 .;CDS_Target=comp85196_c0_seq1 93 25 .;locus=RLOC_00021968
Chr2	stalkie_big_nohaplotig	exon	137247837	137248077	99	-	.	Parent=comp85196_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137248008	137248076	.	-	0	Parent=comp85196_c0_seq1.mrna1
Chr2	gffcl	locus	137270742	137271411	.	-	.	ID=RLOC_00021969;geneIDs=comp128920_c0_seq1.path1;transcripts=comp128920_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137270742	137271411	.	-	.	ID=comp128920_c0_seq1.mrna1;geneID=comp128920_c0_seq1.path1;Name=comp128920_c0_seq1;Dir=indeterminatecoverage=97.1;identity=99.4;matches=669;mismatches=1;indels=3;unknowns=0;Target=comp128920_c0_seq1 673 1 .;CDS_Target=comp128920_c0_seq1 131 3 .;locus=RLOC_00021969
Chr2	stalkie_big_nohaplotig	exon	137270742	137271411	99	-	.	Parent=comp128920_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137271281	137271409	.	-	0	Parent=comp128920_c0_seq1.mrna1
Chr2	gffcl	locus	137271871	137272115	.	-	.	ID=RLOC_00021970;geneIDs=comp83993_c0_seq1.path1;transcripts=comp83993_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137271871	137272115	.	-	.	ID=comp83993_c0_seq1.mrna1;geneID=comp83993_c0_seq1.path1;Name=comp83993_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=245;mismatches=0;indels=0;unknowns=0;Target=comp83993_c0_seq1 245 1 .;CDS_Target=comp83993_c0_seq1 86 3 .;locus=RLOC_00021970
Chr2	stalkie_big_nohaplotig	exon	137271871	137272115	100	-	.	Parent=comp83993_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137272030	137272113	.	-	0	Parent=comp83993_c0_seq1.mrna1
Chr2	gffcl	locus	137272771	137273442	.	+	.	ID=RLOC_00021971;geneIDs=comp141776_c0_seq1.path1;transcripts=comp141776_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137272771	137273442	.	+	.	ID=comp141776_c0_seq1.mrna1;geneID=comp141776_c0_seq1.path1;Name=comp141776_c0_seq1;Dir=indeterminatecoverage=96.4;identity=91.7;matches=607;mismatches=17;indels=38;unknowns=0;Target=comp141776_c0_seq1 304 269 .;locus=RLOC_00021971
Chr2	stalkie_big_nohaplotig	exon	137272771	137273319	93	+	.	Parent=comp141776_c0_seq1.mrna1;Target=comp141776_c0_seq1 551 26 .
Chr2	stalkie_big_nohaplotig	exon	137273337	137273442	84	+	.	Parent=comp141776_c0_seq1.mrna1;Target=comp141776_c0_seq1 686 582 .
Chr2	stalkie_big_nohaplotig	CDS	137273012	137273047	.	+	0	Parent=comp141776_c0_seq1.mrna1
Chr2	gffcl	locus	137283620	137287283	.	-	.	ID=RLOC_00021972;geneIDs=FBgn0039016.1.path1;transcripts=FBgn0039016.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137283620	137287283	.	-	.	ID=FBgn0039016.1.mrna1;geneID=FBgn0039016.1.path1;Name=FBgn0039016.1;Dir=sensecoverage=39.9;identity=99.3;matches=2723;mismatches=19;indels=0;unknowns=0;locus=RLOC_00021972
Chr2	stalkie_big_nohaplotig	exon	137283620	137283895	99	-	.	Parent=FBgn0039016.1.mrna1;Target=FBgn0039016.1 2467 2742 +
Chr2	stalkie_big_nohaplotig	exon	137283966	137285608	99	-	.	Parent=FBgn0039016.1.mrna1;Target=FBgn0039016.1 824 2466 +
Chr2	stalkie_big_nohaplotig	exon	137286383	137286552	99	-	.	Parent=FBgn0039016.1.mrna1;Target=FBgn0039016.1 654 823 +
Chr2	stalkie_big_nohaplotig	exon	137286631	137287283	99	-	.	Parent=FBgn0039016.1.mrna1;Target=FBgn0039016.1 1 653 +
Chr2	gffcl	locus	137287405	137289440	.	+	.	ID=RLOC_00021973;geneIDs=comp161787_c0_seq1.path1;transcripts=comp161787_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137287405	137289440	.	+	.	ID=comp161787_c0_seq1.mrna1;geneID=comp161787_c0_seq1.path1;Name=comp161787_c0_seq1;Dir=sensecoverage=99.0;identity=98.2;matches=1267;mismatches=19;indels=4;unknowns=0;locus=RLOC_00021973
Chr2	stalkie_big_nohaplotig	exon	137287405	137288249	97	+	.	Parent=comp161787_c0_seq1.mrna1;Target=comp161787_c0_seq1 2 849 +
Chr2	stalkie_big_nohaplotig	exon	137288622	137288774	96	+	.	Parent=comp161787_c0_seq1.mrna1;Target=comp161787_c0_seq1 850 1002 +
Chr2	stalkie_big_nohaplotig	exon	137288961	137289100	100	+	.	Parent=comp161787_c0_seq1.mrna1;Target=comp161787_c0_seq1 1003 1142 +
Chr2	stalkie_big_nohaplotig	exon	137289292	137289440	99	+	.	Parent=comp161787_c0_seq1.mrna1;Target=comp161787_c0_seq1 1143 1290 +
Chr2	stalkie_big_nohaplotig	CDS	137288685	137288774	.	+	0	Parent=comp161787_c0_seq1.mrna1;Target=comp161787_c0_seq1 913 1002 +
Chr2	stalkie_big_nohaplotig	CDS	137288961	137288978	.	+	0	Parent=comp161787_c0_seq1.mrna1;Target=comp161787_c0_seq1 1003 1020 +
Chr2	gffcl	locus	137289529	137290047	.	+	.	ID=RLOC_00021974;geneIDs=comp145855_c0_seq1.path1;transcripts=comp145855_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137289529	137290047	.	+	.	ID=comp145855_c0_seq1.mrna1;geneID=comp145855_c0_seq1.path1;Name=comp145855_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=514;mismatches=5;indels=0;unknowns=0;Target=comp145855_c0_seq1 519 1 .;CDS_Target=comp145855_c0_seq1 381 277 .;locus=RLOC_00021974
Chr2	stalkie_big_nohaplotig	exon	137289529	137290047	99	+	.	Parent=comp145855_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137289805	137289909	.	+	0	Parent=comp145855_c0_seq1.mrna1
Chr2	gffcl	locus	137290729	137291434	.	+	.	ID=RLOC_00021975;geneIDs=FBgn0039019.1.path1;transcripts=FBgn0039019.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137290729	137291434	.	+	.	ID=FBgn0039019.1.mrna1;geneID=FBgn0039019.1.path1;Name=FBgn0039019.1;Dir=sensecoverage=100.0;identity=99.2;matches=646;mismatches=5;indels=0;unknowns=0;locus=RLOC_00021975
Chr2	stalkie_big_nohaplotig	exon	137290729	137290856	99	+	.	Parent=FBgn0039019.1.mrna1;Target=FBgn0039019.1 1 128 +
Chr2	stalkie_big_nohaplotig	exon	137290912	137291434	99	+	.	Parent=FBgn0039019.1.mrna1;Target=FBgn0039019.1 129 651 +
Chr2	stalkie_big_nohaplotig	CDS	137290729	137290856	.	+	0	Parent=FBgn0039019.1.mrna1;Target=FBgn0039019.1 1 128 +
Chr2	stalkie_big_nohaplotig	CDS	137290912	137291434	.	+	1	Parent=FBgn0039019.1.mrna1;Target=FBgn0039019.1 129 651 +
Chr2	gffcl	locus	137291563	137292525	.	-	.	ID=RLOC_00021976;geneIDs=FBgn0039020.1.path1;transcripts=FBgn0039020.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137291563	137292525	.	-	.	ID=FBgn0039020.1.mrna1;geneID=FBgn0039020.1.path1;Name=FBgn0039020.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=961;mismatches=2;indels=0;unknowns=0;Target=FBgn0039020.1 963 1 .;locus=RLOC_00021976
Chr2	stalkie_big_nohaplotig	exon	137291563	137292525	99	-	.	Parent=FBgn0039020.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137291563	137292525	.	-	0	Parent=FBgn0039020.1.mrna1
Chr2	gffcl	locus	137292814	137294122	.	-	.	ID=RLOC_00021977;geneIDs=FBgn0086253.1.path1;transcripts=FBgn0086253.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137292814	137294122	.	-	.	ID=FBgn0086253.1.mrna1;geneID=FBgn0086253.1.path1;Name=FBgn0086253.1;Dir=sensecoverage=100.0;identity=99.7;matches=1247;mismatches=4;indels=0;unknowns=0;locus=RLOC_00021977
Chr2	stalkie_big_nohaplotig	exon	137292814	137293898	99	-	.	Parent=FBgn0086253.1.mrna1;Target=FBgn0086253.1 167 1251 +
Chr2	stalkie_big_nohaplotig	exon	137293957	137294122	98	-	.	Parent=FBgn0086253.1.mrna1;Target=FBgn0086253.1 1 166 +
Chr2	stalkie_big_nohaplotig	CDS	137292814	137293898	.	-	2	Parent=FBgn0086253.1.mrna1;Target=FBgn0086253.1 167 1251 +
Chr2	stalkie_big_nohaplotig	CDS	137293957	137294122	.	-	0	Parent=FBgn0086253.1.mrna1;Target=FBgn0086253.1 1 166 +
Chr2	gffcl	locus	137330640	137332826	.	-	.	ID=RLOC_00021978;geneIDs=FBgn0039022.1.path1;transcripts=FBgn0039022.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137330640	137332826	.	-	.	ID=FBgn0039022.1.mrna1;geneID=FBgn0039022.1.path1;Name=FBgn0039022.1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=2160;mismatches=27;indels=0;unknowns=0;Target=FBgn0039022.1 2187 1 .;locus=RLOC_00021978
Chr2	stalkie_big_nohaplotig	exon	137330640	137332826	98	-	.	Parent=FBgn0039022.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137330640	137332826	.	-	0	Parent=FBgn0039022.1.mrna1
Chr2	gffcl	locus	137334309	137336441	.	-	.	ID=RLOC_00021979;geneIDs=FBgn0039023.1.path1;transcripts=FBgn0039023.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137334309	137336441	.	-	.	ID=FBgn0039023.1.mrna1;geneID=FBgn0039023.1.path1;Name=FBgn0039023.1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=2114;mismatches=19;indels=0;unknowns=0;Target=FBgn0039023.1 2133 1 .;locus=RLOC_00021979
Chr2	stalkie_big_nohaplotig	exon	137334309	137336441	99	-	.	Parent=FBgn0039023.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137334309	137336441	.	-	0	Parent=FBgn0039023.1.mrna1
Chr2	gffcl	locus	137337645	137339726	.	-	.	ID=RLOC_00021980;geneIDs=FBgn0039024.1.path1;transcripts=FBgn0039024.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137337645	137339726	.	-	.	ID=FBgn0039024.1.mrna1;geneID=FBgn0039024.1.path1;Name=FBgn0039024.1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=2054;mismatches=28;indels=0;unknowns=0;Target=FBgn0039024.1 2082 1 .;locus=RLOC_00021980
Chr2	stalkie_big_nohaplotig	exon	137337645	137339726	98	-	.	Parent=FBgn0039024.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137337645	137339726	.	-	0	Parent=FBgn0039024.1.mrna1
Chr2	gffcl	locus	137345368	137346570	.	+	.	ID=RLOC_00021981;geneIDs=FBgn0039025.1.path1;transcripts=FBgn0039025.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137345368	137346570	.	+	.	ID=FBgn0039025.1.mrna1;geneID=FBgn0039025.1.path1;Name=FBgn0039025.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1196;mismatches=7;indels=0;unknowns=0;Target=FBgn0039025.1 1203 1 .;locus=RLOC_00021981
Chr2	stalkie_big_nohaplotig	exon	137345368	137346570	99	+	.	Parent=FBgn0039025.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137345368	137346570	.	+	0	Parent=FBgn0039025.1.mrna1
Chr2	gffcl	locus	137350014	137351174	.	-	.	ID=RLOC_00021982;geneIDs=comp120026_c0_seq1.path1;transcripts=comp120026_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137350014	137351174	.	-	.	ID=comp120026_c0_seq1.mrna1;geneID=comp120026_c0_seq1.path1;Name=comp120026_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=913;mismatches=10;indels=6;unknowns=0;Target=comp120026_c0_seq1 242 84 .;locus=RLOC_00021982
Chr2	stalkie_big_nohaplotig	exon	137350014	137350424	97	-	.	Parent=comp120026_c0_seq1.mrna1;Target=comp120026_c0_seq1 925 515 .
Chr2	stalkie_big_nohaplotig	exon	137350659	137351174	99	-	.	Parent=comp120026_c0_seq1.mrna1;Target=comp120026_c0_seq1 514 1 .
Chr2	stalkie_big_nohaplotig	CDS	137350931	137351091	.	-	0	Parent=comp120026_c0_seq1.mrna1
Chr2	gffcl	locus	137388626	137392101	.	+	.	ID=RLOC_00021983;geneIDs=FBgn0039026.1.path1;transcripts=FBgn0039026.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137388626	137392101	.	+	.	ID=FBgn0039026.1.mrna1;geneID=FBgn0039026.1.path1;Name=FBgn0039026.1;Dir=sensecoverage=100.0;identity=99.4;matches=2637;mismatches=15;indels=0;unknowns=0;locus=RLOC_00021983
Chr2	stalkie_big_nohaplotig	exon	137388626	137390961	99	+	.	Parent=FBgn0039026.1.mrna1;Target=FBgn0039026.1 1 2336 +
Chr2	stalkie_big_nohaplotig	exon	137391726	137392022	99	+	.	Parent=FBgn0039026.1.mrna1;Target=FBgn0039026.1 2337 2633 +
Chr2	stalkie_big_nohaplotig	exon	137392083	137392101	100	+	.	Parent=FBgn0039026.1.mrna1;Target=FBgn0039026.1 2634 2652 +
Chr2	stalkie_big_nohaplotig	CDS	137388626	137390961	.	+	0	Parent=FBgn0039026.1.mrna1;Target=FBgn0039026.1 1 2336 +
Chr2	stalkie_big_nohaplotig	CDS	137391726	137392022	.	+	1	Parent=FBgn0039026.1.mrna1;Target=FBgn0039026.1 2337 2633 +
Chr2	stalkie_big_nohaplotig	CDS	137392083	137392101	.	+	1	Parent=FBgn0039026.1.mrna1;Target=FBgn0039026.1 2634 2652 +
Chr2	gffcl	locus	137406762	137413656	.	+	.	ID=RLOC_00021984;geneIDs=FBgn0038072.1.path1;transcripts=FBgn0038072.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137406762	137413656	.	+	.	ID=FBgn0038072.1.mrna1;geneID=FBgn0038072.1.path1;Name=FBgn0038072.1;Dir=sensecoverage=100.0;identity=98.9;matches=2107;mismatches=23;indels=0;unknowns=0;locus=RLOC_00021984
Chr2	stalkie_big_nohaplotig	exon	137406762	137406822	100	+	.	Parent=FBgn0038072.1.mrna1;Target=FBgn0038072.1 1 61 +
Chr2	stalkie_big_nohaplotig	exon	137410932	137411011	100	+	.	Parent=FBgn0038072.1.mrna1;Target=FBgn0038072.1 62 141 +
Chr2	stalkie_big_nohaplotig	exon	137411089	137411412	99	+	.	Parent=FBgn0038072.1.mrna1;Target=FBgn0038072.1 142 465 +
Chr2	stalkie_big_nohaplotig	exon	137411470	137411817	100	+	.	Parent=FBgn0038072.1.mrna1;Target=FBgn0038072.1 466 813 +
Chr2	stalkie_big_nohaplotig	exon	137411872	137411984	100	+	.	Parent=FBgn0038072.1.mrna1;Target=FBgn0038072.1 814 926 +
Chr2	stalkie_big_nohaplotig	exon	137412044	137412311	97	+	.	Parent=FBgn0038072.1.mrna1;Target=FBgn0038072.1 927 1194 +
Chr2	stalkie_big_nohaplotig	exon	137412370	137412814	97	+	.	Parent=FBgn0038072.1.mrna1;Target=FBgn0038072.1 1195 1639 +
Chr2	stalkie_big_nohaplotig	exon	137412873	137412941	100	+	.	Parent=FBgn0038072.1.mrna1;Target=FBgn0038072.1 1640 1708 +
Chr2	stalkie_big_nohaplotig	exon	137413170	137413342	98	+	.	Parent=FBgn0038072.1.mrna1;Target=FBgn0038072.1 1709 1881 +
Chr2	stalkie_big_nohaplotig	exon	137413408	137413656	99	+	.	Parent=FBgn0038072.1.mrna1;Target=FBgn0038072.1 1882 2130 +
Chr2	stalkie_big_nohaplotig	CDS	137406762	137406822	.	+	0	Parent=FBgn0038072.1.mrna1;Target=FBgn0038072.1 1 61 +
Chr2	stalkie_big_nohaplotig	CDS	137410932	137411011	.	+	2	Parent=FBgn0038072.1.mrna1;Target=FBgn0038072.1 62 141 +
Chr2	stalkie_big_nohaplotig	CDS	137411089	137411412	.	+	0	Parent=FBgn0038072.1.mrna1;Target=FBgn0038072.1 142 465 +
Chr2	stalkie_big_nohaplotig	CDS	137411470	137411817	.	+	0	Parent=FBgn0038072.1.mrna1;Target=FBgn0038072.1 466 813 +
Chr2	stalkie_big_nohaplotig	CDS	137411872	137411984	.	+	0	Parent=FBgn0038072.1.mrna1;Target=FBgn0038072.1 814 926 +
Chr2	stalkie_big_nohaplotig	CDS	137412044	137412311	.	+	1	Parent=FBgn0038072.1.mrna1;Target=FBgn0038072.1 927 1194 +
Chr2	stalkie_big_nohaplotig	CDS	137412370	137412814	.	+	0	Parent=FBgn0038072.1.mrna1;Target=FBgn0038072.1 1195 1639 +
Chr2	stalkie_big_nohaplotig	CDS	137412873	137412941	.	+	2	Parent=FBgn0038072.1.mrna1;Target=FBgn0038072.1 1640 1708 +
Chr2	stalkie_big_nohaplotig	CDS	137413170	137413342	.	+	2	Parent=FBgn0038072.1.mrna1;Target=FBgn0038072.1 1709 1881 +
Chr2	stalkie_big_nohaplotig	CDS	137413408	137413656	.	+	0	Parent=FBgn0038072.1.mrna1;Target=FBgn0038072.1 1882 2130 +
Chr2	gffcl	locus	137414871	137415634	.	+	.	ID=RLOC_00021985;geneIDs=comp156357_c1_seq1.path1;transcripts=comp156357_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137414871	137415634	.	+	.	ID=comp156357_c1_seq1.mrna1;geneID=comp156357_c1_seq1.path1;Name=comp156357_c1_seq1;Dir=sensecoverage=95.5;identity=100.0;matches=701;mismatches=0;indels=0;unknowns=0;locus=RLOC_00021985
Chr2	stalkie_big_nohaplotig	exon	137414871	137415223	100	+	.	Parent=comp156357_c1_seq1.mrna1;Target=comp156357_c1_seq1 30 382 +
Chr2	stalkie_big_nohaplotig	exon	137415287	137415634	100	+	.	Parent=comp156357_c1_seq1.mrna1;Target=comp156357_c1_seq1 383 730 +
Chr2	stalkie_big_nohaplotig	CDS	137415022	137415223	.	+	0	Parent=comp156357_c1_seq1.mrna1;Target=comp156357_c1_seq1 181 382 +
Chr2	stalkie_big_nohaplotig	CDS	137415287	137415537	.	+	2	Parent=comp156357_c1_seq1.mrna1;Target=comp156357_c1_seq1 383 633 +
Chr2	gffcl	locus	137416281	137417585	.	+	.	ID=RLOC_00021986;geneIDs=FBgn0032030.6.path1;transcripts=FBgn0032030.6.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137416281	137417585	.	+	.	ID=FBgn0032030.6.mrna1;geneID=FBgn0032030.6.path1;Name=FBgn0032030.6;Dir=indeterminatecoverage=100.0;identity=98.2;matches=1282;mismatches=23;indels=0;unknowns=0;Target=FBgn0032030.6 1305 1 .;locus=RLOC_00021986
Chr2	stalkie_big_nohaplotig	exon	137416281	137417585	98	+	.	Parent=FBgn0032030.6.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137416281	137417585	.	+	0	Parent=FBgn0032030.6.mrna1
Chr2	gffcl	locus	137419299	137420495	.	-	.	ID=RLOC_00021987;geneIDs=comp153869_c0_seq1.path1;transcripts=comp153869_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137419299	137420495	.	-	.	ID=comp153869_c0_seq1.mrna1;geneID=comp153869_c0_seq1.path1;Name=comp153869_c0_seq1;Dir=indeterminatecoverage=91.9;identity=100.0;matches=1197;mismatches=0;indels=0;unknowns=0;Target=comp153869_c0_seq1 1303 107 .;CDS_Target=comp153869_c0_seq1 1280 1179 .;locus=RLOC_00021987
Chr2	stalkie_big_nohaplotig	exon	137419299	137420495	100	-	.	Parent=comp153869_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137419322	137419423	.	-	0	Parent=comp153869_c0_seq1.mrna1
Chr2	gffcl	locus	137421085	137421485	.	+	.	ID=RLOC_00021988;geneIDs=comp529273_c0_seq1.path1;transcripts=comp529273_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137421085	137421485	.	+	.	ID=comp529273_c0_seq1.mrna1;geneID=comp529273_c0_seq1.path1;Name=comp529273_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=401;mismatches=0;indels=0;unknowns=0;Target=comp529273_c0_seq1 401 1 .;CDS_Target=comp529273_c0_seq1 171 1 .;locus=RLOC_00021988
Chr2	stalkie_big_nohaplotig	exon	137421085	137421485	100	+	.	Parent=comp529273_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137421085	137421255	.	+	0	Parent=comp529273_c0_seq1.mrna1
Chr2	gffcl	locus	137444602	137453632	.	+	.	ID=RLOC_00021989;geneIDs=FBgn0037215.2.path1;transcripts=FBgn0037215.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137444602	137453632	.	+	.	ID=FBgn0037215.2.mrna1;geneID=FBgn0037215.2.path1;Name=FBgn0037215.2;Dir=sensecoverage=100.0;identity=98.8;matches=2809;mismatches=35;indels=0;unknowns=0;locus=RLOC_00021989
Chr2	stalkie_big_nohaplotig	exon	137444602	137444740	98	+	.	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 1 139 +
Chr2	stalkie_big_nohaplotig	exon	137450093	137450236	100	+	.	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 140 283 +
Chr2	stalkie_big_nohaplotig	exon	137450309	137450666	99	+	.	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 284 641 +
Chr2	stalkie_big_nohaplotig	exon	137450735	137450890	100	+	.	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 642 797 +
Chr2	stalkie_big_nohaplotig	exon	137450956	137451043	100	+	.	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 798 885 +
Chr2	stalkie_big_nohaplotig	exon	137451106	137451280	98	+	.	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 886 1060 +
Chr2	stalkie_big_nohaplotig	exon	137451487	137451597	100	+	.	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 1061 1171 +
Chr2	stalkie_big_nohaplotig	exon	137451654	137451828	99	+	.	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 1172 1346 +
Chr2	stalkie_big_nohaplotig	exon	137451885	137452195	98	+	.	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 1347 1657 +
Chr2	stalkie_big_nohaplotig	exon	137452251	137452669	96	+	.	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 1658 2076 +
Chr2	stalkie_big_nohaplotig	exon	137452731	137452934	99	+	.	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 2077 2280 +
Chr2	stalkie_big_nohaplotig	exon	137453005	137453190	99	+	.	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 2281 2466 +
Chr2	stalkie_big_nohaplotig	exon	137453255	137453632	98	+	.	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 2467 2844 +
Chr2	stalkie_big_nohaplotig	CDS	137444602	137444740	.	+	0	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 1 139 +
Chr2	stalkie_big_nohaplotig	CDS	137450093	137450236	.	+	2	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 140 283 +
Chr2	stalkie_big_nohaplotig	CDS	137450309	137450666	.	+	2	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 284 641 +
Chr2	stalkie_big_nohaplotig	CDS	137450735	137450890	.	+	1	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 642 797 +
Chr2	stalkie_big_nohaplotig	CDS	137450956	137451043	.	+	1	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 798 885 +
Chr2	stalkie_big_nohaplotig	CDS	137451106	137451280	.	+	0	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 886 1060 +
Chr2	stalkie_big_nohaplotig	CDS	137451487	137451597	.	+	2	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 1061 1171 +
Chr2	stalkie_big_nohaplotig	CDS	137451654	137451828	.	+	2	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 1172 1346 +
Chr2	stalkie_big_nohaplotig	CDS	137451885	137452195	.	+	1	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 1347 1657 +
Chr2	stalkie_big_nohaplotig	CDS	137452251	137452669	.	+	2	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 1658 2076 +
Chr2	stalkie_big_nohaplotig	CDS	137452731	137452934	.	+	0	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 2077 2280 +
Chr2	stalkie_big_nohaplotig	CDS	137453005	137453190	.	+	0	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 2281 2466 +
Chr2	stalkie_big_nohaplotig	CDS	137453255	137453632	.	+	0	Parent=FBgn0037215.2.mrna1;Target=FBgn0037215.2 2467 2844 +
Chr2	gffcl	locus	137446298	137447081	.	-	.	ID=RLOC_00021990;geneIDs=comp153577_c0_seq1.path1;transcripts=comp153577_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137446298	137447081	.	-	.	ID=comp153577_c0_seq1.mrna1;geneID=comp153577_c0_seq1.path1;Name=comp153577_c0_seq1;Dir=sensecoverage=98.9;identity=98.9;matches=615;mismatches=6;indels=1;unknowns=0;locus=RLOC_00021990
Chr2	stalkie_big_nohaplotig	exon	137446298	137446685	98	-	.	Parent=comp153577_c0_seq1.mrna1;Target=comp153577_c0_seq1 240 627 +
Chr2	stalkie_big_nohaplotig	exon	137446848	137447081	99	-	.	Parent=comp153577_c0_seq1.mrna1;Target=comp153577_c0_seq1 7 239 +
Chr2	stalkie_big_nohaplotig	CDS	137446384	137446685	.	-	2	Parent=comp153577_c0_seq1.mrna1;Target=comp153577_c0_seq1 240 541 +
Chr2	stalkie_big_nohaplotig	CDS	137446848	137446908	.	-	0	Parent=comp153577_c0_seq1.mrna1;Target=comp153577_c0_seq1 179 239 +
Chr2	gffcl	locus	137448376	137449398	.	-	.	ID=RLOC_00021991;geneIDs=comp153779_c0_seq1.path1;transcripts=comp153779_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137448376	137449398	.	-	.	ID=comp153779_c0_seq1.mrna1;geneID=comp153779_c0_seq1.path1;Name=comp153779_c0_seq1;Dir=antisensecoverage=92.9;identity=99.1;matches=674;mismatches=6;indels=0;unknowns=0;locus=RLOC_00021991
Chr2	stalkie_big_nohaplotig	exon	137448376	137448765	99	-	.	Parent=comp153779_c0_seq1.mrna1;Target=comp153779_c0_seq1 42 431 -
Chr2	stalkie_big_nohaplotig	exon	137448907	137448980	95	-	.	Parent=comp153779_c0_seq1.mrna1;Target=comp153779_c0_seq1 432 505 -
Chr2	stalkie_big_nohaplotig	exon	137449183	137449398	99	-	.	Parent=comp153779_c0_seq1.mrna1;Target=comp153779_c0_seq1 506 721 -
Chr2	stalkie_big_nohaplotig	CDS	137448530	137448765	.	-	2	Parent=comp153779_c0_seq1.mrna1;Target=comp153779_c0_seq1 196 431 .
Chr2	stalkie_big_nohaplotig	CDS	137448907	137448980	.	-	1	Parent=comp153779_c0_seq1.mrna1;Target=comp153779_c0_seq1 432 505 .
Chr2	stalkie_big_nohaplotig	CDS	137449183	137449289	.	-	0	Parent=comp153779_c0_seq1.mrna1;Target=comp153779_c0_seq1 506 612 .
Chr2	gffcl	locus	137455300	137465814	.	+	.	ID=RLOC_00021992;geneIDs=FBgn0037215.1.path1;transcripts=FBgn0037215.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137455300	137465814	.	+	.	ID=FBgn0037215.1.mrna1;geneID=FBgn0037215.1.path1;Name=FBgn0037215.1;Dir=sensecoverage=100.0;identity=99.3;matches=2726;mismatches=19;indels=0;unknowns=0;locus=RLOC_00021992
Chr2	stalkie_big_nohaplotig	exon	137455300	137455456	96	+	.	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 1 157 +
Chr2	stalkie_big_nohaplotig	exon	137461597	137461734	97	+	.	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 158 295 +
Chr2	stalkie_big_nohaplotig	exon	137461931	137462288	100	+	.	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 296 653 +
Chr2	stalkie_big_nohaplotig	exon	137462358	137462513	100	+	.	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 654 809 +
Chr2	stalkie_big_nohaplotig	exon	137462579	137462675	100	+	.	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 810 906 +
Chr2	stalkie_big_nohaplotig	exon	137462747	137462927	100	+	.	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 907 1087 +
Chr2	stalkie_big_nohaplotig	exon	137462986	137463096	98	+	.	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 1088 1198 +
Chr2	stalkie_big_nohaplotig	exon	137464026	137464505	99	+	.	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 1199 1678 +
Chr2	stalkie_big_nohaplotig	exon	137464567	137464988	99	+	.	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 1679 2100 +
Chr2	stalkie_big_nohaplotig	exon	137465048	137465245	100	+	.	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 2101 2298 +
Chr2	stalkie_big_nohaplotig	exon	137465309	137465491	98	+	.	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 2299 2481 +
Chr2	stalkie_big_nohaplotig	exon	137465551	137465814	99	+	.	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 2482 2745 +
Chr2	stalkie_big_nohaplotig	CDS	137455300	137455456	.	+	0	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 1 157 +
Chr2	stalkie_big_nohaplotig	CDS	137461597	137461734	.	+	2	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 158 295 +
Chr2	stalkie_big_nohaplotig	CDS	137461931	137462288	.	+	2	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 296 653 +
Chr2	stalkie_big_nohaplotig	CDS	137462358	137462513	.	+	1	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 654 809 +
Chr2	stalkie_big_nohaplotig	CDS	137462579	137462675	.	+	1	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 810 906 +
Chr2	stalkie_big_nohaplotig	CDS	137462747	137462927	.	+	0	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 907 1087 +
Chr2	stalkie_big_nohaplotig	CDS	137462986	137463096	.	+	2	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 1088 1198 +
Chr2	stalkie_big_nohaplotig	CDS	137464026	137464505	.	+	2	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 1199 1678 +
Chr2	stalkie_big_nohaplotig	CDS	137464567	137464988	.	+	2	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 1679 2100 +
Chr2	stalkie_big_nohaplotig	CDS	137465048	137465245	.	+	0	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 2101 2298 +
Chr2	stalkie_big_nohaplotig	CDS	137465309	137465491	.	+	0	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 2299 2481 +
Chr2	stalkie_big_nohaplotig	CDS	137465551	137465814	.	+	0	Parent=FBgn0037215.1.mrna1;Target=FBgn0037215.1 2482 2745 +
Chr2	gffcl	locus	137468635	137470182	.	-	.	ID=RLOC_00021993;geneIDs=FBgn0037217.1.path1;transcripts=FBgn0037217.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137468635	137470182	.	-	.	ID=FBgn0037217.1.mrna1;geneID=FBgn0037217.1.path1;Name=FBgn0037217.1;Dir=indeterminatecoverage=94.2;identity=99.5;matches=1540;mismatches=8;indels=0;unknowns=0;Target=FBgn0037217.1 1644 97 .;locus=RLOC_00021993
Chr2	stalkie_big_nohaplotig	exon	137468635	137470182	99	-	.	Parent=FBgn0037217.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137468635	137470182	.	-	0	Parent=FBgn0037217.1.mrna1
Chr2	gffcl	locus	137518961	137531299	.	+	.	ID=RLOC_00021994;geneIDs=FBgn0263390.1.path2;transcripts=FBgn0263390.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	137518961	137531299	.	+	.	ID=FBgn0263390.1.mrna2;geneID=FBgn0263390.1.path2;Name=FBgn0263390.1;Dir=sensecoverage=47.0;identity=99.8;matches=859;mismatches=2;indels=0;unknowns=0;locus=RLOC_00021994
Chr2	stalkie_big_nohaplotig	exon	137518961	137519149	100	+	.	Parent=FBgn0263390.1.mrna2;Target=FBgn0263390.1 973 1161 +
Chr2	stalkie_big_nohaplotig	exon	137524587	137524730	100	+	.	Parent=FBgn0263390.1.mrna2;Target=FBgn0263390.1 1162 1305 +
Chr2	stalkie_big_nohaplotig	exon	137524981	137525082	99	+	.	Parent=FBgn0263390.1.mrna2;Target=FBgn0263390.1 1306 1407 +
Chr2	stalkie_big_nohaplotig	exon	137530874	137531299	99	+	.	Parent=FBgn0263390.1.mrna2;Target=FBgn0263390.1 1408 1833 +
Chr2	stalkie_big_nohaplotig	CDS	137518961	137519149	.	+	0	Parent=FBgn0263390.1.mrna2;Target=FBgn0263390.1 973 1161 +
Chr2	stalkie_big_nohaplotig	CDS	137524587	137524730	.	+	0	Parent=FBgn0263390.1.mrna2;Target=FBgn0263390.1 1162 1305 +
Chr2	stalkie_big_nohaplotig	CDS	137524981	137525082	.	+	0	Parent=FBgn0263390.1.mrna2;Target=FBgn0263390.1 1306 1407 +
Chr2	stalkie_big_nohaplotig	CDS	137530874	137531299	.	+	0	Parent=FBgn0263390.1.mrna2;Target=FBgn0263390.1 1408 1833 +
Chr2	gffcl	locus	137646732	137647398	.	+	.	ID=RLOC_00021995;geneIDs=comp91530_c0_seq1.path1;transcripts=comp91530_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137646732	137647398	.	+	.	ID=comp91530_c0_seq1.mrna1;geneID=comp91530_c0_seq1.path1;Name=comp91530_c0_seq1;Dir=indeterminatecoverage=94.9;identity=96.7;matches=650;mismatches=17;indels=5;unknowns=0;Target=comp91530_c0_seq1 708 37 .;CDS_Target=comp91530_c0_seq1 91 38 .;locus=RLOC_00021995
Chr2	stalkie_big_nohaplotig	exon	137646732	137647398	96	+	.	Parent=comp91530_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137646733	137646782	.	+	0	Parent=comp91530_c0_seq1.mrna1
Chr2	gffcl	locus	137727634	137728254	.	-	.	ID=RLOC_00021996;geneIDs=comp138411_c0_seq1.path1;transcripts=comp138411_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137727634	137728254	.	-	.	ID=comp138411_c0_seq1.mrna1;geneID=comp138411_c0_seq1.path1;Name=comp138411_c0_seq1;Dir=indeterminatecoverage=96.3;identity=93.7;matches=583;mismatches=35;indels=4;unknowns=0;Target=comp138411_c0_seq1 643 25 .;CDS_Target=comp138411_c0_seq1 642 499 .;locus=RLOC_00021996
Chr2	stalkie_big_nohaplotig	exon	137727634	137728254	93	-	.	Parent=comp138411_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137727635	137727778	.	-	0	Parent=comp138411_c0_seq1.mrna1
Chr2	gffcl	locus	137729299	137730249	.	+	.	ID=RLOC_00021997;geneIDs=FBgn0031434.2.path1;transcripts=FBgn0031434.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137729299	137730249	.	+	.	ID=FBgn0031434.2.mrna1;geneID=FBgn0031434.2.path1;Name=FBgn0031434.2;Dir=indeterminatecoverage=100.0;identity=99.1;matches=942;mismatches=9;indels=0;unknowns=0;Target=FBgn0031434.2 951 1 .;locus=RLOC_00021997
Chr2	stalkie_big_nohaplotig	exon	137729299	137730249	99	+	.	Parent=FBgn0031434.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137729299	137730249	.	+	0	Parent=FBgn0031434.2.mrna1
Chr2	gffcl	locus	137807062	137837749	.	-	.	ID=RLOC_00021998;geneIDs=comp147531_c0_seq1.path1;transcripts=comp147531_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137807062	137837749	.	-	.	ID=comp147531_c0_seq1.mrna1;geneID=comp147531_c0_seq1.path1;Name=comp147531_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=338;mismatches=6;indels=0;unknowns=0;locus=RLOC_00021998
Chr2	stalkie_big_nohaplotig	exon	137807062	137807242	98	-	.	Parent=comp147531_c0_seq1.mrna1;Target=comp147531_c0_seq1 369 189 .
Chr2	stalkie_big_nohaplotig	exon	137818724	137818731	100	-	.	Parent=comp147531_c0_seq1.mrna1;Target=comp147531_c0_seq1 180 173 .
Chr2	stalkie_big_nohaplotig	exon	137837498	137837504	85	-	.	Parent=comp147531_c0_seq1.mrna1;Target=comp147531_c0_seq1 153 147 .
Chr2	stalkie_big_nohaplotig	exon	137837604	137837749	97	-	.	Parent=comp147531_c0_seq1.mrna1;Target=comp147531_c0_seq1 146 1 .
Chr2	stalkie_big_nohaplotig	CDS	137807215	137807242	.	-	1	Parent=comp147531_c0_seq1.mrna1;Target=comp147531_c0_seq1 216 189 .
Chr2	stalkie_big_nohaplotig	CDS	137818724	137818731	.	-	0	Parent=comp147531_c0_seq1.mrna1;Target=comp147531_c0_seq1 180 173 .
Chr2	stalkie_big_nohaplotig	CDS	137837498	137837504	.	-	1	Parent=comp147531_c0_seq1.mrna1;Target=comp147531_c0_seq1 153 147 .
Chr2	stalkie_big_nohaplotig	CDS	137837604	137837650	.	-	0	Parent=comp147531_c0_seq1.mrna1;Target=comp147531_c0_seq1 146 100 .
Chr2	gffcl	locus	137838867	138152917	.	+	.	ID=RLOC_00021999;geneIDs=FBgn0017590.1.path1;transcripts=FBgn0017590.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137838867	138152917	.	+	.	ID=FBgn0017590.1.mrna1;geneID=FBgn0017590.1.path1;Name=FBgn0017590.1;Dir=sensecoverage=100.0;identity=99.7;matches=1600;mismatches=5;indels=0;unknowns=0;locus=RLOC_00021999
Chr2	stalkie_big_nohaplotig	exon	137838867	137839083	99	+	.	Parent=FBgn0017590.1.mrna1;Target=FBgn0017590.1 1 217 +
Chr2	stalkie_big_nohaplotig	exon	138118167	138118304	100	+	.	Parent=FBgn0017590.1.mrna1;Target=FBgn0017590.1 218 355 +
Chr2	stalkie_big_nohaplotig	exon	138126980	138127180	100	+	.	Parent=FBgn0017590.1.mrna1;Target=FBgn0017590.1 356 556 +
Chr2	stalkie_big_nohaplotig	exon	138127853	138127974	99	+	.	Parent=FBgn0017590.1.mrna1;Target=FBgn0017590.1 557 678 +
Chr2	stalkie_big_nohaplotig	exon	138136632	138136782	99	+	.	Parent=FBgn0017590.1.mrna1;Target=FBgn0017590.1 679 829 +
Chr2	stalkie_big_nohaplotig	exon	138140076	138140173	98	+	.	Parent=FBgn0017590.1.mrna1;Target=FBgn0017590.1 830 927 +
Chr2	stalkie_big_nohaplotig	exon	138142015	138142136	100	+	.	Parent=FBgn0017590.1.mrna1;Target=FBgn0017590.1 928 1049 +
Chr2	stalkie_big_nohaplotig	exon	138143638	138143818	100	+	.	Parent=FBgn0017590.1.mrna1;Target=FBgn0017590.1 1050 1230 +
Chr2	stalkie_big_nohaplotig	exon	138152204	138152377	99	+	.	Parent=FBgn0017590.1.mrna1;Target=FBgn0017590.1 1231 1404 +
Chr2	stalkie_big_nohaplotig	exon	138152717	138152917	100	+	.	Parent=FBgn0017590.1.mrna1;Target=FBgn0017590.1 1405 1605 +
Chr2	stalkie_big_nohaplotig	CDS	137838867	137839083	.	+	0	Parent=FBgn0017590.1.mrna1;Target=FBgn0017590.1 1 217 +
Chr2	stalkie_big_nohaplotig	CDS	138118167	138118304	.	+	2	Parent=FBgn0017590.1.mrna1;Target=FBgn0017590.1 218 355 +
Chr2	stalkie_big_nohaplotig	CDS	138126980	138127180	.	+	2	Parent=FBgn0017590.1.mrna1;Target=FBgn0017590.1 356 556 +
Chr2	stalkie_big_nohaplotig	CDS	138127853	138127974	.	+	2	Parent=FBgn0017590.1.mrna1;Target=FBgn0017590.1 557 678 +
Chr2	stalkie_big_nohaplotig	CDS	138136632	138136782	.	+	0	Parent=FBgn0017590.1.mrna1;Target=FBgn0017590.1 679 829 +
Chr2	stalkie_big_nohaplotig	CDS	138140076	138140173	.	+	2	Parent=FBgn0017590.1.mrna1;Target=FBgn0017590.1 830 927 +
Chr2	stalkie_big_nohaplotig	CDS	138142015	138142136	.	+	0	Parent=FBgn0017590.1.mrna1;Target=FBgn0017590.1 928 1049 +
Chr2	stalkie_big_nohaplotig	CDS	138143638	138143818	.	+	1	Parent=FBgn0017590.1.mrna1;Target=FBgn0017590.1 1050 1230 +
Chr2	stalkie_big_nohaplotig	CDS	138152204	138152377	.	+	0	Parent=FBgn0017590.1.mrna1;Target=FBgn0017590.1 1231 1404 +
Chr2	stalkie_big_nohaplotig	CDS	138152717	138152917	.	+	0	Parent=FBgn0017590.1.mrna1;Target=FBgn0017590.1 1405 1605 +
Chr2	gffcl	locus	137866971	137874257	.	+	.	ID=RLOC_00022000;geneIDs=FBgn0039016.1.path2;transcripts=FBgn0039016.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	137866971	137874257	.	+	.	ID=FBgn0039016.1.mrna2;geneID=FBgn0039016.1.path2;Name=FBgn0039016.1;Dir=sensecoverage=60.1;identity=98.6;matches=4069;mismatches=53;indels=5;unknowns=0;locus=RLOC_00022000
Chr2	stalkie_big_nohaplotig	exon	137866971	137867236	95	+	.	Parent=FBgn0039016.1.mrna2;Target=FBgn0039016.1 2743 3003 +
Chr2	stalkie_big_nohaplotig	exon	137867298	137868518	98	+	.	Parent=FBgn0039016.1.mrna2;Target=FBgn0039016.1 3004 4224 +
Chr2	stalkie_big_nohaplotig	exon	137869258	137869393	100	+	.	Parent=FBgn0039016.1.mrna2;Target=FBgn0039016.1 4225 4360 +
Chr2	stalkie_big_nohaplotig	exon	137869645	137870882	98	+	.	Parent=FBgn0039016.1.mrna2;Target=FBgn0039016.1 4361 5598 +
Chr2	stalkie_big_nohaplotig	exon	137871032	137871145	99	+	.	Parent=FBgn0039016.1.mrna2;Target=FBgn0039016.1 5599 5712 +
Chr2	stalkie_big_nohaplotig	exon	137872913	137873018	98	+	.	Parent=FBgn0039016.1.mrna2;Target=FBgn0039016.1 5713 5818 +
Chr2	stalkie_big_nohaplotig	exon	137873086	137873723	99	+	.	Parent=FBgn0039016.1.mrna2;Target=FBgn0039016.1 5819 6456 +
Chr2	stalkie_big_nohaplotig	exon	137873791	137874032	98	+	.	Parent=FBgn0039016.1.mrna2;Target=FBgn0039016.1 6457 6698 +
Chr2	stalkie_big_nohaplotig	exon	137874092	137874257	100	+	.	Parent=FBgn0039016.1.mrna2;Target=FBgn0039016.1 6699 6864 +
Chr2	stalkie_big_nohaplotig	CDS	137867006	137867236	.	+	0	Parent=FBgn0039016.1.mrna2;Target=FBgn0039016.1 2773 3003 +
Chr2	stalkie_big_nohaplotig	CDS	137867298	137868518	.	+	0	Parent=FBgn0039016.1.mrna2;Target=FBgn0039016.1 3004 4224 +
Chr2	stalkie_big_nohaplotig	CDS	137869258	137869393	.	+	0	Parent=FBgn0039016.1.mrna2;Target=FBgn0039016.1 4225 4360 +
Chr2	stalkie_big_nohaplotig	CDS	137869645	137870882	.	+	2	Parent=FBgn0039016.1.mrna2;Target=FBgn0039016.1 4361 5598 +
Chr2	stalkie_big_nohaplotig	CDS	137871032	137871145	.	+	0	Parent=FBgn0039016.1.mrna2;Target=FBgn0039016.1 5599 5712 +
Chr2	stalkie_big_nohaplotig	CDS	137872913	137873018	.	+	0	Parent=FBgn0039016.1.mrna2;Target=FBgn0039016.1 5713 5818 +
Chr2	stalkie_big_nohaplotig	CDS	137873086	137873723	.	+	2	Parent=FBgn0039016.1.mrna2;Target=FBgn0039016.1 5819 6456 +
Chr2	stalkie_big_nohaplotig	CDS	137873791	137874032	.	+	0	Parent=FBgn0039016.1.mrna2;Target=FBgn0039016.1 6457 6698 +
Chr2	stalkie_big_nohaplotig	CDS	137874092	137874257	.	+	1	Parent=FBgn0039016.1.mrna2;Target=FBgn0039016.1 6699 6864 +
Chr2	gffcl	locus	137874796	137876694	.	-	.	ID=RLOC_00022001;geneIDs=FBgn0038808.1.path1;transcripts=FBgn0038808.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137874796	137876694	.	-	.	ID=FBgn0038808.1.mrna1;geneID=FBgn0038808.1.path1;Name=FBgn0038808.1;Dir=sensecoverage=100.0;identity=100.0;matches=345;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022001
Chr2	stalkie_big_nohaplotig	exon	137874796	137874924	100	-	.	Parent=FBgn0038808.1.mrna1;Target=FBgn0038808.1 217 345 +
Chr2	stalkie_big_nohaplotig	exon	137876356	137876456	100	-	.	Parent=FBgn0038808.1.mrna1;Target=FBgn0038808.1 116 216 +
Chr2	stalkie_big_nohaplotig	exon	137876524	137876596	100	-	.	Parent=FBgn0038808.1.mrna1;Target=FBgn0038808.1 43 115 +
Chr2	stalkie_big_nohaplotig	exon	137876653	137876694	100	-	.	Parent=FBgn0038808.1.mrna1;Target=FBgn0038808.1 1 42 +
Chr2	stalkie_big_nohaplotig	CDS	137874796	137874924	.	-	0	Parent=FBgn0038808.1.mrna1;Target=FBgn0038808.1 217 345 +
Chr2	stalkie_big_nohaplotig	CDS	137876356	137876456	.	-	2	Parent=FBgn0038808.1.mrna1;Target=FBgn0038808.1 116 216 +
Chr2	stalkie_big_nohaplotig	CDS	137876524	137876596	.	-	0	Parent=FBgn0038808.1.mrna1;Target=FBgn0038808.1 43 115 +
Chr2	stalkie_big_nohaplotig	CDS	137876653	137876694	.	-	0	Parent=FBgn0038808.1.mrna1;Target=FBgn0038808.1 1 42 +
Chr2	gffcl	locus	137882996	137885476	.	+	.	ID=RLOC_00022002;geneIDs=FBgn0015282.1.path1;transcripts=FBgn0015282.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137882996	137885476	.	+	.	ID=FBgn0015282.1.mrna1;geneID=FBgn0015282.1.path1;Name=FBgn0015282.1;Dir=sensecoverage=100.0;identity=100.0;matches=1335;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022002
Chr2	stalkie_big_nohaplotig	exon	137882996	137883016	100	+	.	Parent=FBgn0015282.1.mrna1;Target=FBgn0015282.1 1 21 +
Chr2	stalkie_big_nohaplotig	exon	137883101	137884072	100	+	.	Parent=FBgn0015282.1.mrna1;Target=FBgn0015282.1 22 993 +
Chr2	stalkie_big_nohaplotig	exon	137885135	137885476	100	+	.	Parent=FBgn0015282.1.mrna1;Target=FBgn0015282.1 994 1335 +
Chr2	stalkie_big_nohaplotig	CDS	137882996	137883016	.	+	0	Parent=FBgn0015282.1.mrna1;Target=FBgn0015282.1 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	137883101	137884072	.	+	0	Parent=FBgn0015282.1.mrna1;Target=FBgn0015282.1 22 993 +
Chr2	stalkie_big_nohaplotig	CDS	137885135	137885476	.	+	0	Parent=FBgn0015282.1.mrna1;Target=FBgn0015282.1 994 1335 +
Chr2	gffcl	locus	137887915	137889041	.	+	.	ID=RLOC_00022003;geneIDs=FBgn0038951.1.path1;transcripts=FBgn0038951.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137887915	137889041	.	+	.	ID=FBgn0038951.1.mrna1;geneID=FBgn0038951.1.path1;Name=FBgn0038951.1;Dir=sensecoverage=100.0;identity=98.9;matches=881;mismatches=10;indels=0;unknowns=0;locus=RLOC_00022003
Chr2	stalkie_big_nohaplotig	exon	137887915	137888319	98	+	.	Parent=FBgn0038951.1.mrna1;Target=FBgn0038951.1 1 405 +
Chr2	stalkie_big_nohaplotig	exon	137888408	137888656	98	+	.	Parent=FBgn0038951.1.mrna1;Target=FBgn0038951.1 406 654 +
Chr2	stalkie_big_nohaplotig	exon	137888805	137889041	100	+	.	Parent=FBgn0038951.1.mrna1;Target=FBgn0038951.1 655 891 +
Chr2	stalkie_big_nohaplotig	CDS	137887915	137888319	.	+	0	Parent=FBgn0038951.1.mrna1;Target=FBgn0038951.1 1 405 +
Chr2	stalkie_big_nohaplotig	CDS	137888408	137888656	.	+	0	Parent=FBgn0038951.1.mrna1;Target=FBgn0038951.1 406 654 +
Chr2	stalkie_big_nohaplotig	CDS	137888805	137889041	.	+	0	Parent=FBgn0038951.1.mrna1;Target=FBgn0038951.1 655 891 +
Chr2	gffcl	locus	137890617	137893207	.	+	.	ID=RLOC_00022004;geneIDs=FBgn0038950.1.path1;transcripts=FBgn0038950.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137890617	137893207	.	+	.	ID=FBgn0038950.1.mrna1;geneID=FBgn0038950.1.path1;Name=FBgn0038950.1;Dir=sensecoverage=100.0;identity=98.6;matches=908;mismatches=13;indels=0;unknowns=0;locus=RLOC_00022004
Chr2	stalkie_big_nohaplotig	exon	137890617	137890724	99	+	.	Parent=FBgn0038950.1.mrna1;Target=FBgn0038950.1 1 108 +
Chr2	stalkie_big_nohaplotig	exon	137890806	137890917	98	+	.	Parent=FBgn0038950.1.mrna1;Target=FBgn0038950.1 109 220 +
Chr2	stalkie_big_nohaplotig	exon	137890984	137891177	96	+	.	Parent=FBgn0038950.1.mrna1;Target=FBgn0038950.1 221 414 +
Chr2	stalkie_big_nohaplotig	exon	137892620	137892836	98	+	.	Parent=FBgn0038950.1.mrna1;Target=FBgn0038950.1 415 631 +
Chr2	stalkie_big_nohaplotig	exon	137892918	137893207	99	+	.	Parent=FBgn0038950.1.mrna1;Target=FBgn0038950.1 632 921 +
Chr2	stalkie_big_nohaplotig	CDS	137890617	137890724	.	+	0	Parent=FBgn0038950.1.mrna1;Target=FBgn0038950.1 1 108 +
Chr2	stalkie_big_nohaplotig	CDS	137890806	137890917	.	+	0	Parent=FBgn0038950.1.mrna1;Target=FBgn0038950.1 109 220 +
Chr2	stalkie_big_nohaplotig	CDS	137890984	137891177	.	+	2	Parent=FBgn0038950.1.mrna1;Target=FBgn0038950.1 221 414 +
Chr2	stalkie_big_nohaplotig	CDS	137892620	137892836	.	+	0	Parent=FBgn0038950.1.mrna1;Target=FBgn0038950.1 415 631 +
Chr2	stalkie_big_nohaplotig	CDS	137892918	137893207	.	+	2	Parent=FBgn0038950.1.mrna1;Target=FBgn0038950.1 632 921 +
Chr2	gffcl	locus	137898193	137901604	.	-	.	ID=RLOC_00022005;geneIDs=FBgn0262112.1.path1;transcripts=FBgn0262112.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137898193	137901604	.	-	.	ID=FBgn0262112.1.mrna1;geneID=FBgn0262112.1.path1;Name=FBgn0262112.1;Dir=sensecoverage=100.0;identity=99.9;matches=1019;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022005
Chr2	stalkie_big_nohaplotig	exon	137898193	137898337	100	-	.	Parent=FBgn0262112.1.mrna1;Target=FBgn0262112.1 876 1020 +
Chr2	stalkie_big_nohaplotig	exon	137898407	137898768	100	-	.	Parent=FBgn0262112.1.mrna1;Target=FBgn0262112.1 514 875 +
Chr2	stalkie_big_nohaplotig	exon	137900876	137901275	99	-	.	Parent=FBgn0262112.1.mrna1;Target=FBgn0262112.1 114 513 +
Chr2	stalkie_big_nohaplotig	exon	137901492	137901604	100	-	.	Parent=FBgn0262112.1.mrna1;Target=FBgn0262112.1 1 113 +
Chr2	stalkie_big_nohaplotig	CDS	137898193	137898337	.	-	1	Parent=FBgn0262112.1.mrna1;Target=FBgn0262112.1 876 1020 +
Chr2	stalkie_big_nohaplotig	CDS	137898407	137898768	.	-	0	Parent=FBgn0262112.1.mrna1;Target=FBgn0262112.1 514 875 +
Chr2	stalkie_big_nohaplotig	CDS	137900876	137901275	.	-	1	Parent=FBgn0262112.1.mrna1;Target=FBgn0262112.1 114 513 +
Chr2	stalkie_big_nohaplotig	CDS	137901492	137901604	.	-	0	Parent=FBgn0262112.1.mrna1;Target=FBgn0262112.1 1 113 +
Chr2	gffcl	locus	137899246	137900393	.	+	.	ID=RLOC_00022006;geneIDs=comp159174_c0_seq1.path1;transcripts=comp159174_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	137899246	137900393	.	+	.	ID=comp159174_c0_seq1.mrna1;geneID=comp159174_c0_seq1.path1;Name=comp159174_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.8;matches=1113;mismatches=35;indels=26;unknowns=0;Target=comp159174_c0_seq1 1174 1 .;CDS_Target=comp159174_c0_seq1 489 367 .;locus=RLOC_00022006
Chr2	stalkie_big_nohaplotig	exon	137899246	137900393	94	+	.	Parent=comp159174_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	137899612	137899734	.	+	0	Parent=comp159174_c0_seq1.mrna1
Chr2	gffcl	locus	138048674	138049873	.	+	.	ID=RLOC_00022007;geneIDs=ORF1174.path1;transcripts=ORF1174.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138048674	138049873	.	+	.	ID=ORF1174.mrna1;geneID=ORF1174.path1;Name=ORF1174;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1198;mismatches=2;indels=0;unknowns=0;Target=ORF1174 1200 1 .;locus=RLOC_00022007
Chr2	stalkie_big_nohaplotig	exon	138048674	138049873	99	+	.	Parent=ORF1174.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138048674	138049873	.	+	0	Parent=ORF1174.mrna1
Chr2	gffcl	locus	138074316	138077380	.	+	.	ID=RLOC_00022008;geneIDs=comp144962_c1_seq1.path1;transcripts=comp144962_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138074316	138077380	.	+	.	ID=comp144962_c1_seq1.mrna1;geneID=comp144962_c1_seq1.path1;Name=comp144962_c1_seq1;Dir=sensecoverage=97.8;identity=99.8;matches=658;mismatches=1;indels=0;unknowns=0;Target=comp144962_c1_seq1 16 204 +;locus=RLOC_00022008
Chr2	stalkie_big_nohaplotig	exon	138074316	138074619	100	+	.	Parent=comp144962_c1_seq1.mrna1;Target=comp144962_c1_seq1 16 319 +
Chr2	stalkie_big_nohaplotig	exon	138076660	138076707	100	+	.	Parent=comp144962_c1_seq1.mrna1;Target=comp144962_c1_seq1 320 367 +
Chr2	stalkie_big_nohaplotig	exon	138076762	138076962	100	+	.	Parent=comp144962_c1_seq1.mrna1;Target=comp144962_c1_seq1 368 568 +
Chr2	stalkie_big_nohaplotig	exon	138077275	138077380	99	+	.	Parent=comp144962_c1_seq1.mrna1;Target=comp144962_c1_seq1 569 674 +
Chr2	stalkie_big_nohaplotig	CDS	138074316	138074504	.	+	0	Parent=comp144962_c1_seq1.mrna1
Chr2	gffcl	locus	138153638	138154815	.	+	.	ID=RLOC_00022009;geneIDs=comp162181_c0_seq1.path1;transcripts=comp162181_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138153638	138154815	.	+	.	ID=comp162181_c0_seq1.mrna1;geneID=comp162181_c0_seq1.path1;Name=comp162181_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.3;matches=1098;mismatches=45;indels=9;unknowns=0;locus=RLOC_00022009
Chr2	stalkie_big_nohaplotig	exon	138153638	138154481	96	+	.	Parent=comp162181_c0_seq1.mrna1;Target=comp162181_c0_seq1 846 1 .
Chr2	stalkie_big_nohaplotig	exon	138154517	138154815	92	+	.	Parent=comp162181_c0_seq1.mrna1;Target=comp162181_c0_seq1 1164 859 .
Chr2	stalkie_big_nohaplotig	CDS	138154396	138154481	.	+	0	Parent=comp162181_c0_seq1.mrna1;Target=comp162181_c0_seq1 846 761 .
Chr2	stalkie_big_nohaplotig	CDS	138154517	138154618	.	+	1	Parent=comp162181_c0_seq1.mrna1;Target=comp162181_c0_seq1 964 859 .
Chr2	gffcl	locus	138155499	138155893	.	+	.	ID=RLOC_00022010;geneIDs=comp149420_c1_seq1.path1;transcripts=comp149420_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138155499	138155893	.	+	.	ID=comp149420_c1_seq1.mrna1;geneID=comp149420_c1_seq1.path1;Name=comp149420_c1_seq1;Dir=indeterminatecoverage=93.8;identity=98.5;matches=389;mismatches=5;indels=1;unknowns=0;Target=comp149420_c1_seq1 420 27 .;CDS_Target=comp149420_c1_seq1 157 56 .;locus=RLOC_00022010
Chr2	stalkie_big_nohaplotig	exon	138155499	138155893	98	+	.	Parent=comp149420_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138155528	138155629	.	+	0	Parent=comp149420_c1_seq1.mrna1
Chr2	gffcl	locus	138156002	138156287	.	+	.	ID=RLOC_00022011;geneIDs=comp116213_c0_seq1.path1;transcripts=comp116213_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138156002	138156287	.	+	.	ID=comp116213_c0_seq1.mrna1;geneID=comp116213_c0_seq1.path1;Name=comp116213_c0_seq1;Dir=indeterminatecoverage=95.7;identity=99.0;matches=283;mismatches=3;indels=0;unknowns=0;Target=comp116213_c0_seq1 289 4 .;CDS_Target=comp116213_c0_seq1 97 5 .;locus=RLOC_00022011
Chr2	stalkie_big_nohaplotig	exon	138156002	138156287	98	+	.	Parent=comp116213_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138156003	138156095	.	+	0	Parent=comp116213_c0_seq1.mrna1
Chr2	gffcl	locus	138161420	138161875	.	+	.	ID=RLOC_00022012;geneIDs=FBgn0039031.1.path1;transcripts=FBgn0039031.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138161420	138161875	.	+	.	ID=FBgn0039031.1.mrna1;geneID=FBgn0039031.1.path1;Name=FBgn0039031.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=454;mismatches=2;indels=0;unknowns=0;Target=FBgn0039031.1 456 1 .;locus=RLOC_00022012
Chr2	stalkie_big_nohaplotig	exon	138161420	138161875	99	+	.	Parent=FBgn0039031.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138161420	138161875	.	+	0	Parent=FBgn0039031.1.mrna1
Chr2	gffcl	locus	138229993	138230347	.	+	.	ID=RLOC_00022013;geneIDs=comp146549_c0_seq1.path1;transcripts=comp146549_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138229993	138230347	.	+	.	ID=comp146549_c0_seq1.mrna1;geneID=comp146549_c0_seq1.path1;Name=comp146549_c0_seq1;Dir=indeterminatecoverage=89.6;identity=95.0;matches=344;mismatches=10;indels=8;unknowns=0;Target=comp146549_c0_seq1 384 24 .;CDS_Target=comp146549_c0_seq1 181 26 .;locus=RLOC_00022013
Chr2	stalkie_big_nohaplotig	exon	138229993	138230347	95	+	.	Parent=comp146549_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138229995	138230144	.	+	0	Parent=comp146549_c0_seq1.mrna1
Chr2	gffcl	locus	138275868	138276639	.	+	.	ID=RLOC_00022014;geneIDs=comp155703_c0_seq1.path1;transcripts=comp155703_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138275868	138276639	.	+	.	ID=comp155703_c0_seq1.mrna1;geneID=comp155703_c0_seq1.path1;Name=comp155703_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.1;matches=757;mismatches=9;indels=6;unknowns=0;Target=comp155703_c0_seq1 767 2 .;CDS_Target=comp155703_c0_seq1 325 2 .;locus=RLOC_00022014
Chr2	stalkie_big_nohaplotig	exon	138275868	138276639	98	+	.	Parent=comp155703_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138275868	138276197	.	+	0	Parent=comp155703_c0_seq1.mrna1
Chr2	gffcl	locus	138277253	138297417	.	+	.	ID=RLOC_00022015;geneIDs=comp153643_c0_seq1.path1;transcripts=comp153643_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138277253	138297417	.	+	.	ID=comp153643_c0_seq1.mrna1;geneID=comp153643_c0_seq1.path1;Name=comp153643_c0_seq1;Dir=indeterminatecoverage=73.8;identity=97.1;matches=304;mismatches=9;indels=0;unknowns=0;Target=comp153643_c0_seq1 108 1 .;locus=RLOC_00022015
Chr2	stalkie_big_nohaplotig	exon	138277253	138277545	97	+	.	Parent=comp153643_c0_seq1.mrna1;Target=comp153643_c0_seq1 293 1 .
Chr2	stalkie_big_nohaplotig	exon	138281775	138281783	77	+	.	Parent=comp153643_c0_seq1.mrna1;Target=comp153643_c0_seq1 302 294 .
Chr2	stalkie_big_nohaplotig	exon	138283324	138283325	100	+	.	Parent=comp153643_c0_seq1.mrna1;Target=comp153643_c0_seq1 304 303 .
Chr2	stalkie_big_nohaplotig	exon	138297409	138297417	100	+	.	Parent=comp153643_c0_seq1.mrna1;Target=comp153643_c0_seq1 313 305 .
Chr2	stalkie_big_nohaplotig	CDS	138277253	138277360	.	+	0	Parent=comp153643_c0_seq1.mrna1
Chr2	gffcl	locus	138313680	138329378	.	+	.	ID=RLOC_00022016;geneIDs=FBgn0263390.1.path1,comp160010_c1_seq1.path1;transcripts=FBgn0263390.1.mrna1,comp160010_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138313680	138329378	.	+	.	ID=FBgn0263390.1.mrna1;geneID=FBgn0263390.1.path1;Name=FBgn0263390.1;Dir=sensecoverage=53.0;identity=99.5;matches=967;mismatches=5;indels=0;unknowns=0;locus=RLOC_00022016
Chr2	stalkie_big_nohaplotig	exon	138313680	138313897	99	+	.	Parent=FBgn0263390.1.mrna1;Target=FBgn0263390.1 1 218 +
Chr2	stalkie_big_nohaplotig	exon	138327913	138328200	99	+	.	Parent=FBgn0263390.1.mrna1;Target=FBgn0263390.1 219 506 +
Chr2	stalkie_big_nohaplotig	exon	138328271	138328453	100	+	.	Parent=FBgn0263390.1.mrna1;Target=FBgn0263390.1 507 689 +
Chr2	stalkie_big_nohaplotig	exon	138328589	138328764	98	+	.	Parent=FBgn0263390.1.mrna1;Target=FBgn0263390.1 690 865 +
Chr2	stalkie_big_nohaplotig	exon	138329272	138329378	99	+	.	Parent=FBgn0263390.1.mrna1;Target=FBgn0263390.1 866 972 +
Chr2	stalkie_big_nohaplotig	CDS	138313680	138313897	.	+	0	Parent=FBgn0263390.1.mrna1;Target=FBgn0263390.1 1 218 +
Chr2	stalkie_big_nohaplotig	CDS	138327913	138328200	.	+	1	Parent=FBgn0263390.1.mrna1;Target=FBgn0263390.1 219 506 +
Chr2	stalkie_big_nohaplotig	CDS	138328271	138328453	.	+	1	Parent=FBgn0263390.1.mrna1;Target=FBgn0263390.1 507 689 +
Chr2	stalkie_big_nohaplotig	CDS	138328589	138328764	.	+	1	Parent=FBgn0263390.1.mrna1;Target=FBgn0263390.1 690 865 +
Chr2	stalkie_big_nohaplotig	CDS	138329272	138329378	.	+	2	Parent=FBgn0263390.1.mrna1;Target=FBgn0263390.1 866 972 +
Chr2	stalkie_big_nohaplotig	mRNA	138322594	138329375	.	+	.	ID=comp160010_c1_seq1.mrna1;geneID=comp160010_c1_seq1.path1;Name=comp160010_c1_seq1;Dir=antisensecoverage=51.8;identity=98.5;matches=1146;mismatches=18;indels=0;unknowns=0;locus=RLOC_00022016
Chr2	stalkie_big_nohaplotig	exon	138322594	138323006	96	+	.	Parent=comp160010_c1_seq1.mrna1;Target=comp160010_c1_seq1 1823 2235 -
Chr2	stalkie_big_nohaplotig	exon	138327913	138328200	99	+	.	Parent=comp160010_c1_seq1.mrna1;Target=comp160010_c1_seq1 1535 1822 -
Chr2	stalkie_big_nohaplotig	exon	138328271	138328453	100	+	.	Parent=comp160010_c1_seq1.mrna1;Target=comp160010_c1_seq1 1352 1534 -
Chr2	stalkie_big_nohaplotig	exon	138328589	138328764	98	+	.	Parent=comp160010_c1_seq1.mrna1;Target=comp160010_c1_seq1 1176 1351 -
Chr2	stalkie_big_nohaplotig	exon	138329272	138329375	100	+	.	Parent=comp160010_c1_seq1.mrna1;Target=comp160010_c1_seq1 1072 1175 -
Chr2	stalkie_big_nohaplotig	CDS	138322960	138323006	.	+	0	Parent=comp160010_c1_seq1.mrna1;Target=comp160010_c1_seq1 1823 1869 .
Chr2	stalkie_big_nohaplotig	CDS	138327913	138328200	.	+	1	Parent=comp160010_c1_seq1.mrna1;Target=comp160010_c1_seq1 1535 1822 .
Chr2	stalkie_big_nohaplotig	CDS	138328271	138328453	.	+	1	Parent=comp160010_c1_seq1.mrna1;Target=comp160010_c1_seq1 1352 1534 .
Chr2	stalkie_big_nohaplotig	CDS	138328589	138328764	.	+	1	Parent=comp160010_c1_seq1.mrna1;Target=comp160010_c1_seq1 1176 1351 .
Chr2	stalkie_big_nohaplotig	CDS	138329272	138329375	.	+	2	Parent=comp160010_c1_seq1.mrna1;Target=comp160010_c1_seq1 1072 1175 .
Chr2	gffcl	locus	138335219	138340294	.	+	.	ID=RLOC_00022017;geneIDs=FBgn0039040.1.path1;transcripts=FBgn0039040.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138335219	138340294	.	+	.	ID=FBgn0039040.1.mrna1;geneID=FBgn0039040.1.path1;Name=FBgn0039040.1;Dir=sensecoverage=100.0;identity=98.8;matches=950;mismatches=10;indels=2;unknowns=0;Target=FBgn0039040.1 3 131 +;locus=RLOC_00022017
Chr2	stalkie_big_nohaplotig	exon	138335219	138335403	95	+	.	Parent=FBgn0039040.1.mrna1;Target=FBgn0039040.1 1 183 +
Chr2	stalkie_big_nohaplotig	exon	138338603	138338758	100	+	.	Parent=FBgn0039040.1.mrna1;Target=FBgn0039040.1 184 339 +
Chr2	stalkie_big_nohaplotig	exon	138339457	138339633	99	+	.	Parent=FBgn0039040.1.mrna1;Target=FBgn0039040.1 340 516 +
Chr2	stalkie_big_nohaplotig	exon	138339710	138339782	98	+	.	Parent=FBgn0039040.1.mrna1;Target=FBgn0039040.1 517 589 +
Chr2	stalkie_big_nohaplotig	exon	138339859	138340168	99	+	.	Parent=FBgn0039040.1.mrna1;Target=FBgn0039040.1 590 899 +
Chr2	stalkie_big_nohaplotig	exon	138340234	138340294	100	+	.	Parent=FBgn0039040.1.mrna1;Target=FBgn0039040.1 900 960 +
Chr2	stalkie_big_nohaplotig	CDS	138335221	138335351	.	+	0	Parent=FBgn0039040.1.mrna1
Chr2	gffcl	locus	138343016	138349920	.	+	.	ID=RLOC_00022018;geneIDs=FBgn0039040.2.path1;transcripts=FBgn0039040.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138343016	138349920	.	+	.	ID=FBgn0039040.2.mrna1;geneID=FBgn0039040.2.path1;Name=FBgn0039040.2;Dir=sensecoverage=100.0;identity=99.0;matches=944;mismatches=9;indels=1;unknowns=0;locus=RLOC_00022018
Chr2	stalkie_big_nohaplotig	exon	138343016	138343195	100	+	.	Parent=FBgn0039040.2.mrna1;Target=FBgn0039040.2 1 180 +
Chr2	stalkie_big_nohaplotig	exon	138348865	138349020	100	+	.	Parent=FBgn0039040.2.mrna1;Target=FBgn0039040.2 181 336 +
Chr2	stalkie_big_nohaplotig	exon	138349085	138349261	100	+	.	Parent=FBgn0039040.2.mrna1;Target=FBgn0039040.2 337 513 +
Chr2	stalkie_big_nohaplotig	exon	138349338	138349410	100	+	.	Parent=FBgn0039040.2.mrna1;Target=FBgn0039040.2 514 586 +
Chr2	stalkie_big_nohaplotig	exon	138349482	138349788	97	+	.	Parent=FBgn0039040.2.mrna1;Target=FBgn0039040.2 587 893 +
Chr2	stalkie_big_nohaplotig	exon	138349861	138349920	96	+	.	Parent=FBgn0039040.2.mrna1;Target=FBgn0039040.2 894 954 +
Chr2	stalkie_big_nohaplotig	CDS	138343016	138343195	.	+	0	Parent=FBgn0039040.2.mrna1;Target=FBgn0039040.2 1 180 +
Chr2	stalkie_big_nohaplotig	CDS	138348865	138349020	.	+	0	Parent=FBgn0039040.2.mrna1;Target=FBgn0039040.2 181 336 +
Chr2	stalkie_big_nohaplotig	CDS	138349085	138349261	.	+	0	Parent=FBgn0039040.2.mrna1;Target=FBgn0039040.2 337 513 +
Chr2	stalkie_big_nohaplotig	CDS	138349338	138349410	.	+	0	Parent=FBgn0039040.2.mrna1;Target=FBgn0039040.2 514 586 +
Chr2	stalkie_big_nohaplotig	CDS	138349482	138349788	.	+	2	Parent=FBgn0039040.2.mrna1;Target=FBgn0039040.2 587 893 +
Chr2	stalkie_big_nohaplotig	CDS	138349861	138349920	.	+	1	Parent=FBgn0039040.2.mrna1;Target=FBgn0039040.2 894 954 +
Chr2	gffcl	locus	138347518	138348460	.	-	.	ID=RLOC_00022019;geneIDs=comp151005_c1_seq1.path1;transcripts=comp151005_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138347518	138348460	.	-	.	ID=comp151005_c1_seq1.mrna1;geneID=comp151005_c1_seq1.path1;Name=comp151005_c1_seq1;Dir=indeterminatecoverage=100.0;identity=94.3;matches=928;mismatches=14;indels=42;unknowns=0;Target=comp151005_c1_seq1 983 1 .;CDS_Target=comp151005_c1_seq1 561 409 .;locus=RLOC_00022019
Chr2	stalkie_big_nohaplotig	exon	138347518	138348460	94	-	.	Parent=comp151005_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138347910	138348062	.	-	0	Parent=comp151005_c1_seq1.mrna1
Chr2	gffcl	locus	138353636	138354230	.	+	.	ID=RLOC_00022020;geneIDs=comp150527_c0_seq1.path1;transcripts=comp150527_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138353636	138354230	.	+	.	ID=comp150527_c0_seq1.mrna1;geneID=comp150527_c0_seq1.path1;Name=comp150527_c0_seq1;Dir=antisensecoverage=100.0;identity=98.3;matches=450;mismatches=8;indels=0;unknowns=0;locus=RLOC_00022020
Chr2	stalkie_big_nohaplotig	exon	138353636	138353647	100	+	.	Parent=comp150527_c0_seq1.mrna1;Target=comp150527_c0_seq1 447 458 -
Chr2	stalkie_big_nohaplotig	exon	138353719	138354031	98	+	.	Parent=comp150527_c0_seq1.mrna1;Target=comp150527_c0_seq1 134 446 -
Chr2	stalkie_big_nohaplotig	exon	138354098	138354230	96	+	.	Parent=comp150527_c0_seq1.mrna1;Target=comp150527_c0_seq1 1 133 -
Chr2	stalkie_big_nohaplotig	CDS	138353638	138353647	.	+	0	Parent=comp150527_c0_seq1.mrna1;Target=comp150527_c0_seq1 447 456 .
Chr2	stalkie_big_nohaplotig	CDS	138353719	138354031	.	+	2	Parent=comp150527_c0_seq1.mrna1;Target=comp150527_c0_seq1 134 446 .
Chr2	stalkie_big_nohaplotig	CDS	138354098	138354227	.	+	1	Parent=comp150527_c0_seq1.mrna1;Target=comp150527_c0_seq1 4 133 .
Chr2	gffcl	locus	138361994	138363114	.	-	.	ID=RLOC_00022021;geneIDs=FBgn0053985.1.path1;transcripts=FBgn0053985.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138361994	138363114	.	-	.	ID=FBgn0053985.1.mrna1;geneID=FBgn0053985.1.path1;Name=FBgn0053985.1;Dir=sensecoverage=100.0;identity=99.7;matches=1059;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022021
Chr2	stalkie_big_nohaplotig	exon	138361994	138362188	100	-	.	Parent=FBgn0053985.1.mrna1;Target=FBgn0053985.1 868 1062 +
Chr2	stalkie_big_nohaplotig	exon	138362248	138363114	99	-	.	Parent=FBgn0053985.1.mrna1;Target=FBgn0053985.1 1 867 +
Chr2	stalkie_big_nohaplotig	CDS	138361994	138362188	.	-	0	Parent=FBgn0053985.1.mrna1;Target=FBgn0053985.1 868 1062 +
Chr2	stalkie_big_nohaplotig	CDS	138362248	138363114	.	-	0	Parent=FBgn0053985.1.mrna1;Target=FBgn0053985.1 1 867 +
Chr2	gffcl	locus	138366196	138369948	.	-	.	ID=RLOC_00022022;geneIDs=FBgn0039043.1.path1;transcripts=FBgn0039043.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138366196	138369948	.	-	.	ID=FBgn0039043.1.mrna1;geneID=FBgn0039043.1.path1;Name=FBgn0039043.1;Dir=sensecoverage=97.1;identity=99.7;matches=796;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022022
Chr2	stalkie_big_nohaplotig	exon	138366196	138366280	100	-	.	Parent=FBgn0039043.1.mrna1;Target=FBgn0039043.1 738 822 +
Chr2	stalkie_big_nohaplotig	exon	138366552	138366677	100	-	.	Parent=FBgn0039043.1.mrna1;Target=FBgn0039043.1 612 737 +
Chr2	stalkie_big_nohaplotig	exon	138367073	138367250	99	-	.	Parent=FBgn0039043.1.mrna1;Target=FBgn0039043.1 434 611 +
Chr2	stalkie_big_nohaplotig	exon	138369054	138369126	100	-	.	Parent=FBgn0039043.1.mrna1;Target=FBgn0039043.1 361 433 +
Chr2	stalkie_big_nohaplotig	exon	138369223	138369399	100	-	.	Parent=FBgn0039043.1.mrna1;Target=FBgn0039043.1 184 360 +
Chr2	stalkie_big_nohaplotig	exon	138369790	138369948	99	-	.	Parent=FBgn0039043.1.mrna1;Target=FBgn0039043.1 25 183 +
Chr2	stalkie_big_nohaplotig	CDS	138366196	138366280	.	-	1	Parent=FBgn0039043.1.mrna1;Target=FBgn0039043.1 738 822 +
Chr2	stalkie_big_nohaplotig	CDS	138366552	138366677	.	-	1	Parent=FBgn0039043.1.mrna1;Target=FBgn0039043.1 612 737 +
Chr2	stalkie_big_nohaplotig	CDS	138367073	138367250	.	-	2	Parent=FBgn0039043.1.mrna1;Target=FBgn0039043.1 434 611 +
Chr2	stalkie_big_nohaplotig	CDS	138369054	138369126	.	-	0	Parent=FBgn0039043.1.mrna1;Target=FBgn0039043.1 361 433 +
Chr2	stalkie_big_nohaplotig	CDS	138369223	138369399	.	-	0	Parent=FBgn0039043.1.mrna1;Target=FBgn0039043.1 184 360 +
Chr2	stalkie_big_nohaplotig	CDS	138369790	138369948	.	-	0	Parent=FBgn0039043.1.mrna1;Target=FBgn0039043.1 25 183 +
Chr2	gffcl	locus	138428529	138443858	.	+	.	ID=RLOC_00022023;geneIDs=FBgn0039038.1.path1;transcripts=FBgn0039038.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138428529	138443858	.	+	.	ID=FBgn0039038.1.mrna1;geneID=FBgn0039038.1.path1;Name=FBgn0039038.1;Dir=sensecoverage=100.0;identity=99.8;matches=1030;mismatches=1;indels=1;unknowns=0;locus=RLOC_00022023
Chr2	stalkie_big_nohaplotig	exon	138428529	138428750	99	+	.	Parent=FBgn0039038.1.mrna1;Target=FBgn0039038.1 1 222 +
Chr2	stalkie_big_nohaplotig	exon	138428940	138429008	100	+	.	Parent=FBgn0039038.1.mrna1;Target=FBgn0039038.1 223 291 +
Chr2	stalkie_big_nohaplotig	exon	138441699	138441821	100	+	.	Parent=FBgn0039038.1.mrna1;Target=FBgn0039038.1 292 414 +
Chr2	stalkie_big_nohaplotig	exon	138443242	138443858	99	+	.	Parent=FBgn0039038.1.mrna1;Target=FBgn0039038.1 415 1032 +
Chr2	stalkie_big_nohaplotig	CDS	138428529	138428750	.	+	0	Parent=FBgn0039038.1.mrna1;Target=FBgn0039038.1 1 222 +
Chr2	stalkie_big_nohaplotig	CDS	138428940	138429008	.	+	0	Parent=FBgn0039038.1.mrna1;Target=FBgn0039038.1 223 291 +
Chr2	stalkie_big_nohaplotig	CDS	138441699	138441821	.	+	0	Parent=FBgn0039038.1.mrna1;Target=FBgn0039038.1 292 414 +
Chr2	stalkie_big_nohaplotig	CDS	138443242	138443858	.	+	0	Parent=FBgn0039038.1.mrna1;Target=FBgn0039038.1 415 1032 +
Chr2	gffcl	locus	138444628	138449236	.	+	.	ID=RLOC_00022024;geneIDs=ORF1628.path1;transcripts=ORF1628.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138444628	138449236	.	+	.	ID=ORF1628.mrna1;geneID=ORF1628.path1;Name=ORF1628;Dir=sensecoverage=99.7;identity=99.8;matches=1036;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022024
Chr2	stalkie_big_nohaplotig	exon	138444628	138445150	99	+	.	Parent=ORF1628.mrna1;Target=ORF1628 1 523 +
Chr2	stalkie_big_nohaplotig	exon	138448346	138448682	99	+	.	Parent=ORF1628.mrna1;Target=ORF1628 524 860 +
Chr2	stalkie_big_nohaplotig	exon	138449059	138449236	100	+	.	Parent=ORF1628.mrna1;Target=ORF1628 861 1038 +
Chr2	stalkie_big_nohaplotig	CDS	138444628	138445150	.	+	0	Parent=ORF1628.mrna1;Target=ORF1628 1 523 +
Chr2	stalkie_big_nohaplotig	CDS	138448346	138448682	.	+	2	Parent=ORF1628.mrna1;Target=ORF1628 524 860 +
Chr2	stalkie_big_nohaplotig	CDS	138449059	138449236	.	+	1	Parent=ORF1628.mrna1;Target=ORF1628 861 1038 +
Chr2	gffcl	locus	138449780	138450830	.	-	.	ID=RLOC_00022025;geneIDs=comp157838_c2_seq1.path1;transcripts=comp157838_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138449780	138450830	.	-	.	ID=comp157838_c2_seq1.mrna1;geneID=comp157838_c2_seq1.path1;Name=comp157838_c2_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=1030;mismatches=17;indels=12;unknowns=0;Target=comp157838_c2_seq1 1055 1 .;CDS_Target=comp157838_c2_seq1 846 538 .;locus=RLOC_00022025
Chr2	stalkie_big_nohaplotig	exon	138449780	138450830	97	-	.	Parent=comp157838_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138449989	138450289	.	-	0	Parent=comp157838_c2_seq1.mrna1
Chr2	gffcl	locus	138471057	138471560	.	+	.	ID=RLOC_00022026;geneIDs=comp114296_c0_seq1.path1;transcripts=comp114296_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138471057	138471560	.	+	.	ID=comp114296_c0_seq1.mrna1;geneID=comp114296_c0_seq1.path1;Name=comp114296_c0_seq1;Dir=indeterminatecoverage=95.4;identity=98.8;matches=498;mismatches=4;indels=2;unknowns=0;Target=comp114296_c0_seq1 502 1 .;CDS_Target=comp114296_c0_seq1 177 1 .;locus=RLOC_00022026
Chr2	stalkie_big_nohaplotig	exon	138471057	138471560	98	+	.	Parent=comp114296_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138471057	138471235	.	+	0	Parent=comp114296_c0_seq1.mrna1
Chr2	gffcl	locus	138490359	138491398	.	+	.	ID=RLOC_00022027;geneIDs=comp86562_c0_seq1.path1;transcripts=comp86562_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138490359	138491398	.	+	.	ID=comp86562_c0_seq1.mrna1;geneID=comp86562_c0_seq1.path1;Name=comp86562_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.1;matches=961;mismatches=28;indels=78;unknowns=0;Target=comp86562_c0_seq1 1016 1 .;CDS_Target=comp86562_c0_seq1 436 218 .;locus=RLOC_00022027
Chr2	stalkie_big_nohaplotig	exon	138490359	138491398	90	+	.	Parent=comp86562_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138490576	138490789	.	+	0	Parent=comp86562_c0_seq1.mrna1
Chr2	gffcl	locus	138495449	138497605	.	-	.	ID=RLOC_00022028;geneIDs=FBgn0039040.3.path1,comp161594_c0_seq1.path1;transcripts=comp161594_c0_seq1.mrna1,FBgn0039040.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138495449	138496677	.	-	.	ID=comp161594_c0_seq1.mrna1;geneID=comp161594_c0_seq1.path1;Name=comp161594_c0_seq1;Dir=antisensecoverage=67.5;identity=97.9;matches=929;mismatches=20;indels=0;unknowns=0;locus=RLOC_00022028
Chr2	stalkie_big_nohaplotig	exon	138495449	138495620	95	-	.	Parent=comp161594_c0_seq1.mrna1;Target=comp161594_c0_seq1 1 172 -
Chr2	stalkie_big_nohaplotig	exon	138495680	138496122	99	-	.	Parent=comp161594_c0_seq1.mrna1;Target=comp161594_c0_seq1 173 615 -
Chr2	stalkie_big_nohaplotig	exon	138496191	138496367	96	-	.	Parent=comp161594_c0_seq1.mrna1;Target=comp161594_c0_seq1 616 792 -
Chr2	stalkie_big_nohaplotig	exon	138496521	138496677	98	-	.	Parent=comp161594_c0_seq1.mrna1;Target=comp161594_c0_seq1 793 949 -
Chr2	stalkie_big_nohaplotig	CDS	138496003	138496122	.	-	0	Parent=comp161594_c0_seq1.mrna1;Target=comp161594_c0_seq1 496 615 .
Chr2	stalkie_big_nohaplotig	CDS	138496191	138496367	.	-	0	Parent=comp161594_c0_seq1.mrna1;Target=comp161594_c0_seq1 616 792 .
Chr2	stalkie_big_nohaplotig	CDS	138496521	138496676	.	-	0	Parent=comp161594_c0_seq1.mrna1;Target=comp161594_c0_seq1 793 948 .
Chr2	stalkie_big_nohaplotig	mRNA	138495536	138497605	.	-	.	ID=FBgn0039040.3.mrna1;geneID=FBgn0039040.3.path1;Name=FBgn0039040.3;Dir=sensecoverage=100.0;identity=98.8;matches=963;mismatches=12;indels=0;unknowns=0;locus=RLOC_00022028
Chr2	stalkie_big_nohaplotig	exon	138495536	138495620	94	-	.	Parent=FBgn0039040.3.mrna1;Target=FBgn0039040.3 891 975 +
Chr2	stalkie_big_nohaplotig	exon	138495680	138495989	99	-	.	Parent=FBgn0039040.3.mrna1;Target=FBgn0039040.3 581 890 +
Chr2	stalkie_big_nohaplotig	exon	138496050	138496122	100	-	.	Parent=FBgn0039040.3.mrna1;Target=FBgn0039040.3 508 580 +
Chr2	stalkie_big_nohaplotig	exon	138496191	138496367	99	-	.	Parent=FBgn0039040.3.mrna1;Target=FBgn0039040.3 331 507 +
Chr2	stalkie_big_nohaplotig	exon	138496521	138496676	99	-	.	Parent=FBgn0039040.3.mrna1;Target=FBgn0039040.3 175 330 +
Chr2	stalkie_big_nohaplotig	exon	138497432	138497605	97	-	.	Parent=FBgn0039040.3.mrna1;Target=FBgn0039040.3 1 174 +
Chr2	stalkie_big_nohaplotig	CDS	138495536	138495620	.	-	1	Parent=FBgn0039040.3.mrna1;Target=FBgn0039040.3 891 975 +
Chr2	stalkie_big_nohaplotig	CDS	138495680	138495989	.	-	2	Parent=FBgn0039040.3.mrna1;Target=FBgn0039040.3 581 890 +
Chr2	stalkie_big_nohaplotig	CDS	138496050	138496122	.	-	0	Parent=FBgn0039040.3.mrna1;Target=FBgn0039040.3 508 580 +
Chr2	stalkie_big_nohaplotig	CDS	138496191	138496367	.	-	0	Parent=FBgn0039040.3.mrna1;Target=FBgn0039040.3 331 507 +
Chr2	stalkie_big_nohaplotig	CDS	138496521	138496676	.	-	0	Parent=FBgn0039040.3.mrna1;Target=FBgn0039040.3 175 330 +
Chr2	stalkie_big_nohaplotig	CDS	138497432	138497605	.	-	0	Parent=FBgn0039040.3.mrna1;Target=FBgn0039040.3 1 174 +
Chr2	gffcl	locus	138526064	138527171	.	+	.	ID=RLOC_00022029;geneIDs=comp148538_c0_seq1.path1;transcripts=comp148538_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138526064	138527171	.	+	.	ID=comp148538_c0_seq1.mrna1;geneID=comp148538_c0_seq1.path1;Name=comp148538_c0_seq1;Dir=indeterminatecoverage=98.3;identity=99.8;matches=1107;mismatches=1;indels=1;unknowns=0;Target=comp148538_c0_seq1 1109 1 .;CDS_Target=comp148538_c0_seq1 1075 902 .;locus=RLOC_00022029
Chr2	stalkie_big_nohaplotig	exon	138526064	138527171	99	+	.	Parent=comp148538_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138526964	138527137	.	+	0	Parent=comp148538_c0_seq1.mrna1
Chr2	gffcl	locus	138577994	138579344	.	-	.	ID=RLOC_00022030;geneIDs=comp159975_c2_seq1.path1;transcripts=comp159975_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138577994	138579344	.	-	.	ID=comp159975_c2_seq1.mrna1;geneID=comp159975_c2_seq1.path1;Name=comp159975_c2_seq1;Dir=indeterminatecoverage=55.1;identity=95.8;matches=1310;mismatches=41;indels=16;unknowns=0;Target=comp159975_c2_seq1 2482 1116 .;CDS_Target=comp159975_c2_seq1 1299 1117 .;locus=RLOC_00022030
Chr2	stalkie_big_nohaplotig	exon	138577994	138579344	95	-	.	Parent=comp159975_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138579162	138579343	.	-	0	Parent=comp159975_c2_seq1.mrna1
Chr2	gffcl	locus	138585625	138587314	.	+	.	ID=RLOC_00022031;geneIDs=comp148904_c0_seq1.path1;transcripts=comp148904_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138585625	138587314	.	+	.	ID=comp148904_c0_seq1.mrna1;geneID=comp148904_c0_seq1.path1;Name=comp148904_c0_seq1;Dir=indeterminatecoverage=98.9;identity=96.1;matches=1634;mismatches=51;indels=15;unknowns=0;Target=comp148904_c0_seq1 1695 1 .;CDS_Target=comp148904_c0_seq1 1358 1197 .;locus=RLOC_00022031
Chr2	stalkie_big_nohaplotig	exon	138585625	138587314	96	+	.	Parent=comp148904_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138586818	138586980	.	+	0	Parent=comp148904_c0_seq1.mrna1
Chr2	gffcl	locus	138594390	138595763	.	+	.	ID=RLOC_00022032;geneIDs=comp154159_c1_seq1.path1;transcripts=comp154159_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138594390	138595763	.	+	.	ID=comp154159_c1_seq1.mrna1;geneID=comp154159_c1_seq1.path1;Name=comp154159_c1_seq1;Dir=sensecoverage=98.5;identity=95.9;matches=1187;mismatches=15;indels=36;unknowns=0;Target=comp154159_c1_seq1 684 785 +;locus=RLOC_00022032
Chr2	stalkie_big_nohaplotig	exon	138594390	138595201	95	+	.	Parent=comp154159_c1_seq1.mrna1;Target=comp154159_c1_seq1 18 793 +
Chr2	stalkie_big_nohaplotig	exon	138595338	138595763	96	+	.	Parent=comp154159_c1_seq1.mrna1;Target=comp154159_c1_seq1 794 1219 +
Chr2	stalkie_big_nohaplotig	CDS	138595092	138595193	.	+	0	Parent=comp154159_c1_seq1.mrna1
Chr2	gffcl	locus	138596293	138597695	.	+	.	ID=RLOC_00022033;geneIDs=FBgn0041225.1.path1;transcripts=FBgn0041225.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138596293	138597695	.	+	.	ID=FBgn0041225.1.mrna1;geneID=FBgn0041225.1.path1;Name=FBgn0041225.1;Dir=sensecoverage=100.0;identity=99.8;matches=1263;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022033
Chr2	stalkie_big_nohaplotig	exon	138596293	138597330	99	+	.	Parent=FBgn0041225.1.mrna1;Target=FBgn0041225.1 1 1038 +
Chr2	stalkie_big_nohaplotig	exon	138597403	138597561	99	+	.	Parent=FBgn0041225.1.mrna1;Target=FBgn0041225.1 1039 1197 +
Chr2	stalkie_big_nohaplotig	exon	138597627	138597695	100	+	.	Parent=FBgn0041225.1.mrna1;Target=FBgn0041225.1 1198 1266 +
Chr2	stalkie_big_nohaplotig	CDS	138596293	138597330	.	+	0	Parent=FBgn0041225.1.mrna1;Target=FBgn0041225.1 1 1038 +
Chr2	stalkie_big_nohaplotig	CDS	138597403	138597561	.	+	0	Parent=FBgn0041225.1.mrna1;Target=FBgn0041225.1 1039 1197 +
Chr2	stalkie_big_nohaplotig	CDS	138597627	138597695	.	+	0	Parent=FBgn0041225.1.mrna1;Target=FBgn0041225.1 1198 1266 +
Chr2	gffcl	locus	138600121	138604180	.	-	.	ID=RLOC_00022034;geneIDs=FBgn0039044.1.path1;transcripts=FBgn0039044.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138600121	138604180	.	-	.	ID=FBgn0039044.1.mrna1;geneID=FBgn0039044.1.path1;Name=FBgn0039044.1;Dir=sensecoverage=100.0;identity=99.9;matches=1984;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022034
Chr2	stalkie_big_nohaplotig	exon	138600121	138600402	100	-	.	Parent=FBgn0039044.1.mrna1;Target=FBgn0039044.1 1705 1986 +
Chr2	stalkie_big_nohaplotig	exon	138600477	138601991	99	-	.	Parent=FBgn0039044.1.mrna1;Target=FBgn0039044.1 190 1704 +
Chr2	stalkie_big_nohaplotig	exon	138603350	138603386	100	-	.	Parent=FBgn0039044.1.mrna1;Target=FBgn0039044.1 153 189 +
Chr2	stalkie_big_nohaplotig	exon	138603454	138603552	100	-	.	Parent=FBgn0039044.1.mrna1;Target=FBgn0039044.1 54 152 +
Chr2	stalkie_big_nohaplotig	exon	138604128	138604180	98	-	.	Parent=FBgn0039044.1.mrna1;Target=FBgn0039044.1 1 53 +
Chr2	stalkie_big_nohaplotig	CDS	138600121	138600402	.	-	0	Parent=FBgn0039044.1.mrna1;Target=FBgn0039044.1 1705 1986 +
Chr2	stalkie_big_nohaplotig	CDS	138600477	138601991	.	-	0	Parent=FBgn0039044.1.mrna1;Target=FBgn0039044.1 190 1704 +
Chr2	stalkie_big_nohaplotig	CDS	138603350	138603386	.	-	1	Parent=FBgn0039044.1.mrna1;Target=FBgn0039044.1 153 189 +
Chr2	stalkie_big_nohaplotig	CDS	138603454	138603552	.	-	1	Parent=FBgn0039044.1.mrna1;Target=FBgn0039044.1 54 152 +
Chr2	stalkie_big_nohaplotig	CDS	138604128	138604180	.	-	0	Parent=FBgn0039044.1.mrna1;Target=FBgn0039044.1 1 53 +
Chr2	gffcl	locus	138609952	138612351	.	+	.	ID=RLOC_00022035;geneIDs=FBgn0038113.1.path1;transcripts=FBgn0038113.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138609952	138612351	.	+	.	ID=FBgn0038113.1.mrna1;geneID=FBgn0038113.1.path1;Name=FBgn0038113.1;Dir=sensecoverage=100.0;identity=99.6;matches=1369;mismatches=5;indels=0;unknowns=0;locus=RLOC_00022035
Chr2	stalkie_big_nohaplotig	exon	138609952	138610066	98	+	.	Parent=FBgn0038113.1.mrna1;Target=FBgn0038113.1 1 115 +
Chr2	stalkie_big_nohaplotig	exon	138610136	138610540	100	+	.	Parent=FBgn0038113.1.mrna1;Target=FBgn0038113.1 116 520 +
Chr2	stalkie_big_nohaplotig	exon	138610620	138610792	100	+	.	Parent=FBgn0038113.1.mrna1;Target=FBgn0038113.1 521 693 +
Chr2	stalkie_big_nohaplotig	exon	138611332	138611453	100	+	.	Parent=FBgn0038113.1.mrna1;Target=FBgn0038113.1 694 815 +
Chr2	stalkie_big_nohaplotig	exon	138611525	138611677	100	+	.	Parent=FBgn0038113.1.mrna1;Target=FBgn0038113.1 816 968 +
Chr2	stalkie_big_nohaplotig	exon	138611736	138611818	98	+	.	Parent=FBgn0038113.1.mrna1;Target=FBgn0038113.1 969 1051 +
Chr2	stalkie_big_nohaplotig	exon	138611944	138612101	100	+	.	Parent=FBgn0038113.1.mrna1;Target=FBgn0038113.1 1052 1209 +
Chr2	stalkie_big_nohaplotig	exon	138612187	138612351	98	+	.	Parent=FBgn0038113.1.mrna1;Target=FBgn0038113.1 1210 1374 +
Chr2	stalkie_big_nohaplotig	CDS	138609952	138610066	.	+	0	Parent=FBgn0038113.1.mrna1;Target=FBgn0038113.1 1 115 +
Chr2	stalkie_big_nohaplotig	CDS	138610136	138610540	.	+	2	Parent=FBgn0038113.1.mrna1;Target=FBgn0038113.1 116 520 +
Chr2	stalkie_big_nohaplotig	CDS	138610620	138610792	.	+	2	Parent=FBgn0038113.1.mrna1;Target=FBgn0038113.1 521 693 +
Chr2	stalkie_big_nohaplotig	CDS	138611332	138611453	.	+	0	Parent=FBgn0038113.1.mrna1;Target=FBgn0038113.1 694 815 +
Chr2	stalkie_big_nohaplotig	CDS	138611525	138611677	.	+	1	Parent=FBgn0038113.1.mrna1;Target=FBgn0038113.1 816 968 +
Chr2	stalkie_big_nohaplotig	CDS	138611736	138611818	.	+	1	Parent=FBgn0038113.1.mrna1;Target=FBgn0038113.1 969 1051 +
Chr2	stalkie_big_nohaplotig	CDS	138611944	138612101	.	+	2	Parent=FBgn0038113.1.mrna1;Target=FBgn0038113.1 1052 1209 +
Chr2	stalkie_big_nohaplotig	CDS	138612187	138612351	.	+	0	Parent=FBgn0038113.1.mrna1;Target=FBgn0038113.1 1210 1374 +
Chr2	gffcl	locus	138612985	138614607	.	-	.	ID=RLOC_00022036;geneIDs=FBgn0003450.1.path1;transcripts=FBgn0003450.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138612985	138614607	.	-	.	ID=FBgn0003450.1.mrna1;geneID=FBgn0003450.1.path1;Name=FBgn0003450.1;Dir=sensecoverage=99.9;identity=98.4;matches=938;mismatches=12;indels=3;unknowns=0;locus=RLOC_00022036
Chr2	stalkie_big_nohaplotig	exon	138612985	138613566	98	-	.	Parent=FBgn0003450.1.mrna1;Target=FBgn0003450.1 369 950 +
Chr2	stalkie_big_nohaplotig	exon	138613642	138613751	97	-	.	Parent=FBgn0003450.1.mrna1;Target=FBgn0003450.1 259 368 +
Chr2	stalkie_big_nohaplotig	exon	138614279	138614415	97	-	.	Parent=FBgn0003450.1.mrna1;Target=FBgn0003450.1 122 258 +
Chr2	stalkie_big_nohaplotig	exon	138614484	138614607	97	-	.	Parent=FBgn0003450.1.mrna1;Target=FBgn0003450.1 1 121 +
Chr2	stalkie_big_nohaplotig	CDS	138612987	138613566	.	-	1	Parent=FBgn0003450.1.mrna1;Target=FBgn0003450.1 369 948 +
Chr2	stalkie_big_nohaplotig	CDS	138613642	138613751	.	-	0	Parent=FBgn0003450.1.mrna1;Target=FBgn0003450.1 259 368 +
Chr2	stalkie_big_nohaplotig	CDS	138614279	138614415	.	-	2	Parent=FBgn0003450.1.mrna1;Target=FBgn0003450.1 122 258 +
Chr2	stalkie_big_nohaplotig	CDS	138614484	138614607	.	-	0	Parent=FBgn0003450.1.mrna1;Target=FBgn0003450.1 1 121 +
Chr2	gffcl	locus	138621573	138628180	.	+	.	ID=RLOC_00022037;geneIDs=FBgn0001217.1.path1;transcripts=FBgn0001217.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138621573	138628180	.	+	.	ID=FBgn0001217.1.mrna1;geneID=FBgn0001217.1.path1;Name=FBgn0001217.1;Dir=sensecoverage=100.0;identity=99.3;matches=1343;mismatches=10;indels=0;unknowns=0;locus=RLOC_00022037
Chr2	stalkie_big_nohaplotig	exon	138621573	138621752	100	+	.	Parent=FBgn0001217.1.mrna1;Target=FBgn0001217.1 1 180 +
Chr2	stalkie_big_nohaplotig	exon	138627008	138628180	99	+	.	Parent=FBgn0001217.1.mrna1;Target=FBgn0001217.1 181 1353 +
Chr2	stalkie_big_nohaplotig	CDS	138621573	138621752	.	+	0	Parent=FBgn0001217.1.mrna1;Target=FBgn0001217.1 1 180 +
Chr2	stalkie_big_nohaplotig	CDS	138627008	138628180	.	+	0	Parent=FBgn0001217.1.mrna1;Target=FBgn0001217.1 181 1353 +
Chr2	gffcl	locus	138634137	138645336	.	+	.	ID=RLOC_00022038;geneIDs=comp156851_c0_seq1.path1;transcripts=comp156851_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138634137	138645336	.	+	.	ID=comp156851_c0_seq1.mrna1;geneID=comp156851_c0_seq1.path1;Name=comp156851_c0_seq1;Dir=sensecoverage=99.4;identity=99.8;matches=1872;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022038
Chr2	stalkie_big_nohaplotig	exon	138634137	138634748	99	+	.	Parent=comp156851_c0_seq1.mrna1;Target=comp156851_c0_seq1 1 612 +
Chr2	stalkie_big_nohaplotig	exon	138634821	138634950	100	+	.	Parent=comp156851_c0_seq1.mrna1;Target=comp156851_c0_seq1 613 742 +
Chr2	stalkie_big_nohaplotig	exon	138642706	138643167	100	+	.	Parent=comp156851_c0_seq1.mrna1;Target=comp156851_c0_seq1 743 1204 +
Chr2	stalkie_big_nohaplotig	exon	138644601	138644956	99	+	.	Parent=comp156851_c0_seq1.mrna1;Target=comp156851_c0_seq1 1205 1560 +
Chr2	stalkie_big_nohaplotig	exon	138645021	138645336	99	+	.	Parent=comp156851_c0_seq1.mrna1;Target=comp156851_c0_seq1 1561 1876 +
Chr2	stalkie_big_nohaplotig	CDS	138634855	138634950	.	+	0	Parent=comp156851_c0_seq1.mrna1;Target=comp156851_c0_seq1 647 742 +
Chr2	stalkie_big_nohaplotig	CDS	138642706	138643167	.	+	0	Parent=comp156851_c0_seq1.mrna1;Target=comp156851_c0_seq1 743 1204 +
Chr2	stalkie_big_nohaplotig	CDS	138644601	138644956	.	+	0	Parent=comp156851_c0_seq1.mrna1;Target=comp156851_c0_seq1 1205 1560 +
Chr2	stalkie_big_nohaplotig	CDS	138645021	138645084	.	+	1	Parent=comp156851_c0_seq1.mrna1;Target=comp156851_c0_seq1 1561 1624 +
Chr2	gffcl	locus	138647603	138649932	.	+	.	ID=RLOC_00022039;geneIDs=FBgn0051157.1.path1;transcripts=FBgn0051157.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138647603	138649932	.	+	.	ID=FBgn0051157.1.mrna1;geneID=FBgn0051157.1.path1;Name=FBgn0051157.1;Dir=sensecoverage=100.0;identity=98.3;matches=1238;mismatches=22;indels=0;unknowns=0;locus=RLOC_00022039
Chr2	stalkie_big_nohaplotig	exon	138647603	138647797	100	+	.	Parent=FBgn0051157.1.mrna1;Target=FBgn0051157.1 1 195 +
Chr2	stalkie_big_nohaplotig	exon	138647887	138648017	98	+	.	Parent=FBgn0051157.1.mrna1;Target=FBgn0051157.1 196 326 +
Chr2	stalkie_big_nohaplotig	exon	138648793	138648916	99	+	.	Parent=FBgn0051157.1.mrna1;Target=FBgn0051157.1 327 450 +
Chr2	stalkie_big_nohaplotig	exon	138649008	138649379	97	+	.	Parent=FBgn0051157.1.mrna1;Target=FBgn0051157.1 451 822 +
Chr2	stalkie_big_nohaplotig	exon	138649439	138649788	97	+	.	Parent=FBgn0051157.1.mrna1;Target=FBgn0051157.1 823 1172 +
Chr2	stalkie_big_nohaplotig	exon	138649845	138649932	97	+	.	Parent=FBgn0051157.1.mrna1;Target=FBgn0051157.1 1173 1260 +
Chr2	stalkie_big_nohaplotig	CDS	138647603	138647797	.	+	0	Parent=FBgn0051157.1.mrna1;Target=FBgn0051157.1 1 195 +
Chr2	stalkie_big_nohaplotig	CDS	138647887	138648017	.	+	0	Parent=FBgn0051157.1.mrna1;Target=FBgn0051157.1 196 326 +
Chr2	stalkie_big_nohaplotig	CDS	138648793	138648916	.	+	1	Parent=FBgn0051157.1.mrna1;Target=FBgn0051157.1 327 450 +
Chr2	stalkie_big_nohaplotig	CDS	138649008	138649379	.	+	0	Parent=FBgn0051157.1.mrna1;Target=FBgn0051157.1 451 822 +
Chr2	stalkie_big_nohaplotig	CDS	138649439	138649788	.	+	0	Parent=FBgn0051157.1.mrna1;Target=FBgn0051157.1 823 1172 +
Chr2	stalkie_big_nohaplotig	CDS	138649845	138649932	.	+	1	Parent=FBgn0051157.1.mrna1;Target=FBgn0051157.1 1173 1260 +
Chr2	gffcl	locus	138653631	138654194	.	-	.	ID=RLOC_00022041;geneIDs=comp152029_c0_seq1.path1;transcripts=comp152029_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138653631	138654194	.	-	.	ID=comp152029_c0_seq1.mrna1;geneID=comp152029_c0_seq1.path1;Name=comp152029_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=563;mismatches=1;indels=0;unknowns=0;Target=comp152029_c0_seq1 564 1 .;CDS_Target=comp152029_c0_seq1 515 342 .;locus=RLOC_00022041
Chr2	stalkie_big_nohaplotig	exon	138653631	138654194	99	-	.	Parent=comp152029_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138653680	138653853	.	-	0	Parent=comp152029_c0_seq1.mrna1
Chr2	gffcl	locus	138660286	138681664	.	-	.	ID=RLOC_00022042;geneIDs=comp112900_c0_seq1.path1;transcripts=comp112900_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138660286	138681664	.	-	.	ID=comp112900_c0_seq1.mrna1;geneID=comp112900_c0_seq1.path1;Name=comp112900_c0_seq1;Dir=indeterminatecoverage=86.8;identity=100.0;matches=334;mismatches=0;indels=0;unknowns=0;Target=comp112900_c0_seq1 377 291 .;locus=RLOC_00022042
Chr2	stalkie_big_nohaplotig	exon	138660286	138660605	100	-	.	Parent=comp112900_c0_seq1.mrna1;Target=comp112900_c0_seq1 385 66 .
Chr2	stalkie_big_nohaplotig	exon	138664677	138664678	100	-	.	Parent=comp112900_c0_seq1.mrna1;Target=comp112900_c0_seq1 65 64 .
Chr2	stalkie_big_nohaplotig	exon	138671043	138671045	100	-	.	Parent=comp112900_c0_seq1.mrna1;Target=comp112900_c0_seq1 63 61 .
Chr2	stalkie_big_nohaplotig	exon	138673776	138673777	100	-	.	Parent=comp112900_c0_seq1.mrna1;Target=comp112900_c0_seq1 60 59 .
Chr2	stalkie_big_nohaplotig	exon	138681658	138681664	100	-	.	Parent=comp112900_c0_seq1.mrna1;Target=comp112900_c0_seq1 58 52 .
Chr2	stalkie_big_nohaplotig	CDS	138660294	138660380	.	-	0	Parent=comp112900_c0_seq1.mrna1
Chr2	gffcl	locus	138660689	138685638	.	+	.	ID=RLOC_00022043;geneIDs=FBgn0067783.1.path1;transcripts=FBgn0067783.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138660689	138685638	.	+	.	ID=FBgn0067783.1.mrna1;geneID=FBgn0067783.1.path1;Name=FBgn0067783.1;Dir=sensecoverage=100.0;identity=99.9;matches=1181;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022043
Chr2	stalkie_big_nohaplotig	exon	138660689	138660745	100	+	.	Parent=FBgn0067783.1.mrna1;Target=FBgn0067783.1 1 57 +
Chr2	stalkie_big_nohaplotig	exon	138679872	138680094	100	+	.	Parent=FBgn0067783.1.mrna1;Target=FBgn0067783.1 58 280 +
Chr2	stalkie_big_nohaplotig	exon	138682691	138682805	100	+	.	Parent=FBgn0067783.1.mrna1;Target=FBgn0067783.1 281 395 +
Chr2	stalkie_big_nohaplotig	exon	138682873	138683061	100	+	.	Parent=FBgn0067783.1.mrna1;Target=FBgn0067783.1 396 584 +
Chr2	stalkie_big_nohaplotig	exon	138684694	138684813	100	+	.	Parent=FBgn0067783.1.mrna1;Target=FBgn0067783.1 585 704 +
Chr2	stalkie_big_nohaplotig	exon	138684877	138685022	100	+	.	Parent=FBgn0067783.1.mrna1;Target=FBgn0067783.1 705 850 +
Chr2	stalkie_big_nohaplotig	exon	138685092	138685278	99	+	.	Parent=FBgn0067783.1.mrna1;Target=FBgn0067783.1 851 1037 +
Chr2	stalkie_big_nohaplotig	exon	138685494	138685638	100	+	.	Parent=FBgn0067783.1.mrna1;Target=FBgn0067783.1 1038 1182 +
Chr2	stalkie_big_nohaplotig	CDS	138660689	138660745	.	+	0	Parent=FBgn0067783.1.mrna1;Target=FBgn0067783.1 1 57 +
Chr2	stalkie_big_nohaplotig	CDS	138679872	138680094	.	+	0	Parent=FBgn0067783.1.mrna1;Target=FBgn0067783.1 58 280 +
Chr2	stalkie_big_nohaplotig	CDS	138682691	138682805	.	+	2	Parent=FBgn0067783.1.mrna1;Target=FBgn0067783.1 281 395 +
Chr2	stalkie_big_nohaplotig	CDS	138682873	138683061	.	+	1	Parent=FBgn0067783.1.mrna1;Target=FBgn0067783.1 396 584 +
Chr2	stalkie_big_nohaplotig	CDS	138684694	138684813	.	+	1	Parent=FBgn0067783.1.mrna1;Target=FBgn0067783.1 585 704 +
Chr2	stalkie_big_nohaplotig	CDS	138684877	138685022	.	+	1	Parent=FBgn0067783.1.mrna1;Target=FBgn0067783.1 705 850 +
Chr2	stalkie_big_nohaplotig	CDS	138685092	138685278	.	+	2	Parent=FBgn0067783.1.mrna1;Target=FBgn0067783.1 851 1037 +
Chr2	stalkie_big_nohaplotig	CDS	138685494	138685638	.	+	1	Parent=FBgn0067783.1.mrna1;Target=FBgn0067783.1 1038 1182 +
Chr2	gffcl	locus	138663756	138664665	.	-	.	ID=RLOC_00022044;geneIDs=comp155523_c1_seq1.path1;transcripts=comp155523_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138663756	138664665	.	-	.	ID=comp155523_c1_seq1.mrna1;geneID=comp155523_c1_seq1.path1;Name=comp155523_c1_seq1;Dir=sensecoverage=99.8;identity=98.1;matches=473;mismatches=6;indels=3;unknowns=0;locus=RLOC_00022044
Chr2	stalkie_big_nohaplotig	exon	138663756	138663958	99	-	.	Parent=comp155523_c1_seq1.mrna1;Target=comp155523_c1_seq1 278 480 +
Chr2	stalkie_big_nohaplotig	exon	138664260	138664393	97	-	.	Parent=comp155523_c1_seq1.mrna1;Target=comp155523_c1_seq1 143 277 +
Chr2	stalkie_big_nohaplotig	exon	138664522	138664665	97	-	.	Parent=comp155523_c1_seq1.mrna1;Target=comp155523_c1_seq1 1 142 +
Chr2	stalkie_big_nohaplotig	CDS	138664261	138664393	.	-	2	Parent=comp155523_c1_seq1.mrna1;Target=comp155523_c1_seq1 143 276 +
Chr2	stalkie_big_nohaplotig	CDS	138664522	138664597	.	-	0	Parent=comp155523_c1_seq1.mrna1;Target=comp155523_c1_seq1 67 142 +
Chr2	gffcl	locus	138691702	138692150	.	-	.	ID=RLOC_00022045;geneIDs=comp889143_c0_seq1.path1;transcripts=comp889143_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138691702	138692150	.	-	.	ID=comp889143_c0_seq1.mrna1;geneID=comp889143_c0_seq1.path1;Name=comp889143_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=436;mismatches=5;indels=8;unknowns=0;Target=comp889143_c0_seq1 441 1 .;CDS_Target=comp889143_c0_seq1 109 2 .;locus=RLOC_00022045
Chr2	stalkie_big_nohaplotig	exon	138691702	138692150	97	-	.	Parent=comp889143_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138692034	138692149	.	-	0	Parent=comp889143_c0_seq1.mrna1
Chr2	gffcl	locus	138693466	138693893	.	+	.	ID=RLOC_00022046;geneIDs=comp145851_c0_seq1.path1;transcripts=comp145851_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138693466	138693893	.	+	.	ID=comp145851_c0_seq1.mrna1;geneID=comp145851_c0_seq1.path1;Name=comp145851_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=428;mismatches=0;indels=0;unknowns=0;Target=comp145851_c0_seq1 429 2 .;CDS_Target=comp145851_c0_seq1 366 241 .;locus=RLOC_00022046
Chr2	stalkie_big_nohaplotig	exon	138693466	138693893	100	+	.	Parent=comp145851_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138693705	138693830	.	+	0	Parent=comp145851_c0_seq1.mrna1
Chr2	gffcl	locus	138736682	138748856	.	+	.	ID=RLOC_00022047;geneIDs=FBgn0016917.1.path1;transcripts=FBgn0016917.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138736682	138748856	.	+	.	ID=FBgn0016917.1.mrna1;geneID=FBgn0016917.1.path1;Name=FBgn0016917.1;Dir=sensecoverage=100.0;identity=99.8;matches=2182;mismatches=5;indels=0;unknowns=0;locus=RLOC_00022047
Chr2	stalkie_big_nohaplotig	exon	138736682	138736824	100	+	.	Parent=FBgn0016917.1.mrna1;Target=FBgn0016917.1 1 143 +
Chr2	stalkie_big_nohaplotig	exon	138740615	138741472	99	+	.	Parent=FBgn0016917.1.mrna1;Target=FBgn0016917.1 144 1001 +
Chr2	stalkie_big_nohaplotig	exon	138741532	138741617	100	+	.	Parent=FBgn0016917.1.mrna1;Target=FBgn0016917.1 1002 1087 +
Chr2	stalkie_big_nohaplotig	exon	138741692	138741833	100	+	.	Parent=FBgn0016917.1.mrna1;Target=FBgn0016917.1 1088 1229 +
Chr2	stalkie_big_nohaplotig	exon	138741915	138742032	100	+	.	Parent=FBgn0016917.1.mrna1;Target=FBgn0016917.1 1230 1347 +
Chr2	stalkie_big_nohaplotig	exon	138742087	138742306	100	+	.	Parent=FBgn0016917.1.mrna1;Target=FBgn0016917.1 1348 1567 +
Chr2	stalkie_big_nohaplotig	exon	138742392	138742658	100	+	.	Parent=FBgn0016917.1.mrna1;Target=FBgn0016917.1 1568 1834 +
Chr2	stalkie_big_nohaplotig	exon	138742991	138743173	100	+	.	Parent=FBgn0016917.1.mrna1;Target=FBgn0016917.1 1835 2017 +
Chr2	stalkie_big_nohaplotig	exon	138743252	138743381	100	+	.	Parent=FBgn0016917.1.mrna1;Target=FBgn0016917.1 2018 2147 +
Chr2	stalkie_big_nohaplotig	exon	138748817	138748856	100	+	.	Parent=FBgn0016917.1.mrna1;Target=FBgn0016917.1 2148 2187 +
Chr2	stalkie_big_nohaplotig	CDS	138736682	138736824	.	+	0	Parent=FBgn0016917.1.mrna1;Target=FBgn0016917.1 1 143 +
Chr2	stalkie_big_nohaplotig	CDS	138740615	138741472	.	+	1	Parent=FBgn0016917.1.mrna1;Target=FBgn0016917.1 144 1001 +
Chr2	stalkie_big_nohaplotig	CDS	138741532	138741617	.	+	1	Parent=FBgn0016917.1.mrna1;Target=FBgn0016917.1 1002 1087 +
Chr2	stalkie_big_nohaplotig	CDS	138741692	138741833	.	+	2	Parent=FBgn0016917.1.mrna1;Target=FBgn0016917.1 1088 1229 +
Chr2	stalkie_big_nohaplotig	CDS	138741915	138742032	.	+	1	Parent=FBgn0016917.1.mrna1;Target=FBgn0016917.1 1230 1347 +
Chr2	stalkie_big_nohaplotig	CDS	138742087	138742306	.	+	0	Parent=FBgn0016917.1.mrna1;Target=FBgn0016917.1 1348 1567 +
Chr2	stalkie_big_nohaplotig	CDS	138742392	138742658	.	+	2	Parent=FBgn0016917.1.mrna1;Target=FBgn0016917.1 1568 1834 +
Chr2	stalkie_big_nohaplotig	CDS	138742991	138743173	.	+	2	Parent=FBgn0016917.1.mrna1;Target=FBgn0016917.1 1835 2017 +
Chr2	stalkie_big_nohaplotig	CDS	138743252	138743381	.	+	2	Parent=FBgn0016917.1.mrna1;Target=FBgn0016917.1 2018 2147 +
Chr2	stalkie_big_nohaplotig	CDS	138748817	138748856	.	+	1	Parent=FBgn0016917.1.mrna1;Target=FBgn0016917.1 2148 2187 +
Chr2	gffcl	locus	138743530	138744605	.	-	.	ID=RLOC_00022048;geneIDs=comp160654_c0_seq1.path1;transcripts=comp160654_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138743530	138744605	.	-	.	ID=comp160654_c0_seq1.mrna1;geneID=comp160654_c0_seq1.path1;Name=comp160654_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.3;matches=1042;mismatches=20;indels=31;unknowns=0;Target=comp160654_c0_seq1 1079 1 .;CDS_Target=comp160654_c0_seq1 336 259 .;locus=RLOC_00022048
Chr2	stalkie_big_nohaplotig	exon	138743530	138744605	95	-	.	Parent=comp160654_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138744273	138744351	.	-	0	Parent=comp160654_c0_seq1.mrna1
Chr2	gffcl	locus	138745379	138745605	.	+	.	ID=RLOC_00022049;geneIDs=comp135744_c0_seq1.path1;transcripts=comp135744_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138745379	138745605	.	+	.	ID=comp135744_c0_seq1.mrna1;geneID=comp135744_c0_seq1.path1;Name=comp135744_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=227;mismatches=0;indels=0;unknowns=0;Target=comp135744_c0_seq1 227 1 .;CDS_Target=comp135744_c0_seq1 63 1 .;locus=RLOC_00022049
Chr2	stalkie_big_nohaplotig	exon	138745379	138745605	100	+	.	Parent=comp135744_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138745379	138745441	.	+	0	Parent=comp135744_c0_seq1.mrna1
Chr2	gffcl	locus	138750163	138766477	.	-	.	ID=RLOC_00022050;geneIDs=comp161661_c0_seq1.path1;transcripts=comp161661_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138750163	138766477	.	-	.	ID=comp161661_c0_seq1.mrna1;geneID=comp161661_c0_seq1.path1;Name=comp161661_c0_seq1;Dir=indeterminatecoverage=96.9;identity=96.0;matches=1158;mismatches=16;indels=32;unknowns=0;locus=RLOC_00022050
Chr2	stalkie_big_nohaplotig	exon	138750163	138751334	95	-	.	Parent=comp161661_c0_seq1.mrna1;Target=comp161661_c0_seq1 1236 49 .
Chr2	stalkie_big_nohaplotig	exon	138766468	138766477	100	-	.	Parent=comp161661_c0_seq1.mrna1;Target=comp161661_c0_seq1 48 39 .
Chr2	stalkie_big_nohaplotig	CDS	138751230	138751334	.	-	1	Parent=comp161661_c0_seq1.mrna1;Target=comp161661_c0_seq1 154 49 .
Chr2	stalkie_big_nohaplotig	CDS	138766468	138766475	.	-	0	Parent=comp161661_c0_seq1.mrna1;Target=comp161661_c0_seq1 48 41 .
Chr2	gffcl	locus	138751866	139816762	.	.	.	ID=RLOC_00022051;geneIDs=FBgn0037230.1.path1,comp136296_c0_seq1.path1,comp145387_c0_seq1.path1,comp163056_c0_seq1.path1;transcripts=comp136296_c0_seq1.mrna1,comp145387_c0_seq1.mrna1,comp163056_c0_seq1.mrna1,FBgn0037230.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138751866	139816762	.	+	.	ID=comp136296_c0_seq1.mrna1;geneID=comp136296_c0_seq1.path1;Name=comp136296_c0_seq1;Dir=indeterminatecoverage=81.3;identity=98.2;matches=382;mismatches=0;indels=7;unknowns=0;Target=comp136296_c0_seq1 220 128 .;locus=RLOC_00022051
Chr2	stalkie_big_nohaplotig	exon	138751866	138752136	97	+	.	Parent=comp136296_c0_seq1.mrna1;Target=comp136296_c0_seq1 264 1 .
Chr2	stalkie_big_nohaplotig	exon	139720834	139720838	100	+	.	Parent=comp136296_c0_seq1.mrna1;Target=comp136296_c0_seq1 269 265 .
Chr2	stalkie_big_nohaplotig	exon	139727085	139727088	100	+	.	Parent=comp136296_c0_seq1.mrna1;Target=comp136296_c0_seq1 273 270 .
Chr2	stalkie_big_nohaplotig	exon	139731482	139731485	100	+	.	Parent=comp136296_c0_seq1.mrna1;Target=comp136296_c0_seq1 277 274 .
Chr2	stalkie_big_nohaplotig	exon	139734462	139734464	100	+	.	Parent=comp136296_c0_seq1.mrna1;Target=comp136296_c0_seq1 280 278 .
Chr2	stalkie_big_nohaplotig	exon	139735931	139735940	100	+	.	Parent=comp136296_c0_seq1.mrna1;Target=comp136296_c0_seq1 290 281 .
Chr2	stalkie_big_nohaplotig	exon	139735973	139735974	100	+	.	Parent=comp136296_c0_seq1.mrna1;Target=comp136296_c0_seq1 349 348 .
Chr2	stalkie_big_nohaplotig	exon	139739987	139739997	100	+	.	Parent=comp136296_c0_seq1.mrna1;Target=comp136296_c0_seq1 360 350 .
Chr2	stalkie_big_nohaplotig	exon	139740453	139740457	100	+	.	Parent=comp136296_c0_seq1.mrna1;Target=comp136296_c0_seq1 368 364 .
Chr2	stalkie_big_nohaplotig	exon	139740955	139740961	100	+	.	Parent=comp136296_c0_seq1.mrna1;Target=comp136296_c0_seq1 375 369 .
Chr2	stalkie_big_nohaplotig	exon	139762028	139762029	100	+	.	Parent=comp136296_c0_seq1.mrna1;Target=comp136296_c0_seq1 377 376 .
Chr2	stalkie_big_nohaplotig	exon	139765714	139765722	100	+	.	Parent=comp136296_c0_seq1.mrna1;Target=comp136296_c0_seq1 386 378 .
Chr2	stalkie_big_nohaplotig	exon	139785833	139785840	100	+	.	Parent=comp136296_c0_seq1.mrna1;Target=comp136296_c0_seq1 394 387 .
Chr2	stalkie_big_nohaplotig	exon	139785870	139785879	100	+	.	Parent=comp136296_c0_seq1.mrna1;Target=comp136296_c0_seq1 436 427 .
Chr2	stalkie_big_nohaplotig	exon	139787344	139787349	100	+	.	Parent=comp136296_c0_seq1.mrna1;Target=comp136296_c0_seq1 448 443 .
Chr2	stalkie_big_nohaplotig	exon	139804615	139804625	100	+	.	Parent=comp136296_c0_seq1.mrna1;Target=comp136296_c0_seq1 460 450 .
Chr2	stalkie_big_nohaplotig	exon	139804844	139804848	100	+	.	Parent=comp136296_c0_seq1.mrna1;Target=comp136296_c0_seq1 471 467 .
Chr2	stalkie_big_nohaplotig	exon	139809948	139809955	100	+	.	Parent=comp136296_c0_seq1.mrna1;Target=comp136296_c0_seq1 479 472 .
Chr2	stalkie_big_nohaplotig	exon	139812256	139812260	100	+	.	Parent=comp136296_c0_seq1.mrna1;Target=comp136296_c0_seq1 484 480 .
Chr2	stalkie_big_nohaplotig	exon	139816761	139816762	100	+	.	Parent=comp136296_c0_seq1.mrna1;Target=comp136296_c0_seq1 486 485 .
Chr2	stalkie_big_nohaplotig	CDS	138751993	138752085	.	+	0	Parent=comp136296_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138752117	138752981	.	+	.	ID=comp145387_c0_seq1.mrna1;geneID=comp145387_c0_seq1.path1;Name=comp145387_c0_seq1;Dir=indeterminatecoverage=98.7;identity=99.7;matches=862;mismatches=3;indels=0;unknowns=0;Target=comp145387_c0_seq1 873 9 .;CDS_Target=comp145387_c0_seq1 459 364 .;locus=RLOC_00022051
Chr2	stalkie_big_nohaplotig	exon	138752117	138752981	99	+	.	Parent=comp145387_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138752472	138752567	.	+	0	Parent=comp145387_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139719874	139720889	.	-	.	ID=comp163056_c0_seq1.mrna1;geneID=comp163056_c0_seq1.path1;Name=comp163056_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.3;matches=994;mismatches=21;indels=7;unknowns=0;Target=comp163056_c0_seq1 1021 1 .;CDS_Target=comp163056_c0_seq1 154 131 .;locus=RLOC_00022051
Chr2	stalkie_big_nohaplotig	exon	139719874	139720889	97	-	.	Parent=comp163056_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139720741	139720764	.	-	0	Parent=comp163056_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139761652	139764628	.	+	.	ID=FBgn0037230.1.mrna1;geneID=FBgn0037230.1.path1;Name=FBgn0037230.1;Dir=sensecoverage=100.0;identity=99.6;matches=1910;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022051
Chr2	stalkie_big_nohaplotig	exon	139761652	139762642	99	+	.	Parent=FBgn0037230.1.mrna1;Target=FBgn0037230.1 1 991 +
Chr2	stalkie_big_nohaplotig	exon	139763703	139764628	99	+	.	Parent=FBgn0037230.1.mrna1;Target=FBgn0037230.1 992 1917 +
Chr2	stalkie_big_nohaplotig	CDS	139761652	139762642	.	+	0	Parent=FBgn0037230.1.mrna1;Target=FBgn0037230.1 1 991 +
Chr2	stalkie_big_nohaplotig	CDS	139763703	139764628	.	+	2	Parent=FBgn0037230.1.mrna1;Target=FBgn0037230.1 992 1917 +
Chr2	gffcl	locus	138759661	138760204	.	+	.	ID=RLOC_00022052;geneIDs=comp73966_c0_seq1.path1;transcripts=comp73966_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138759661	138760204	.	+	.	ID=comp73966_c0_seq1.mrna1;geneID=comp73966_c0_seq1.path1;Name=comp73966_c0_seq1;Dir=antisensecoverage=90.2;identity=99.5;matches=420;mismatches=2;indels=0;unknowns=0;Target=comp73966_c0_seq1 319 444 .;locus=RLOC_00022052
Chr2	stalkie_big_nohaplotig	exon	138759661	138760021	99	+	.	Parent=comp73966_c0_seq1.mrna1;Target=comp73966_c0_seq1 86 446 -
Chr2	stalkie_big_nohaplotig	exon	138760144	138760204	100	+	.	Parent=comp73966_c0_seq1.mrna1;Target=comp73966_c0_seq1 25 85 -
Chr2	stalkie_big_nohaplotig	CDS	138759663	138759788	.	+	0	Parent=comp73966_c0_seq1.mrna1
Chr2	gffcl	locus	138762390	138763781	.	-	.	ID=RLOC_00022053;geneIDs=FBgn0038804.1.path1;transcripts=FBgn0038804.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138762390	138763781	.	-	.	ID=FBgn0038804.1.mrna1;geneID=FBgn0038804.1.path1;Name=FBgn0038804.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1385;mismatches=7;indels=0;unknowns=0;Target=FBgn0038804.1 1392 1 .;locus=RLOC_00022053
Chr2	stalkie_big_nohaplotig	exon	138762390	138763781	99	-	.	Parent=FBgn0038804.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138762390	138763781	.	-	0	Parent=FBgn0038804.1.mrna1
Chr2	gffcl	locus	138773499	138775116	.	+	.	ID=RLOC_00022054;geneIDs=comp151038_c0_seq1.path1;transcripts=comp151038_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138773499	138775116	.	+	.	ID=comp151038_c0_seq1.mrna1;geneID=comp151038_c0_seq1.path1;Name=comp151038_c0_seq1;Dir=antisensecoverage=99.0;identity=96.2;matches=554;mismatches=11;indels=11;unknowns=0;locus=RLOC_00022054
Chr2	stalkie_big_nohaplotig	exon	138773499	138773806	100	+	.	Parent=comp151038_c0_seq1.mrna1;Target=comp151038_c0_seq1 269 576 -
Chr2	stalkie_big_nohaplotig	exon	138774860	138775116	91	+	.	Parent=comp151038_c0_seq1.mrna1;Target=comp151038_c0_seq1 1 268 -
Chr2	stalkie_big_nohaplotig	CDS	138773532	138773806	.	+	0	Parent=comp151038_c0_seq1.mrna1;Target=comp151038_c0_seq1 269 543 .
Chr2	stalkie_big_nohaplotig	CDS	138774860	138774872	.	+	1	Parent=comp151038_c0_seq1.mrna1;Target=comp151038_c0_seq1 256 268 .
Chr2	gffcl	locus	138782016	138783530	.	+	.	ID=RLOC_00022055;geneIDs=comp155956_c0_seq1.path1;transcripts=comp155956_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138782016	138783530	.	+	.	ID=comp155956_c0_seq1.mrna1;geneID=comp155956_c0_seq1.path1;Name=comp155956_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1510;mismatches=5;indels=0;unknowns=0;Target=comp155956_c0_seq1 1515 1 .;CDS_Target=comp155956_c0_seq1 464 330 .;locus=RLOC_00022055
Chr2	stalkie_big_nohaplotig	exon	138782016	138783530	99	+	.	Parent=comp155956_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138782345	138782479	.	+	0	Parent=comp155956_c0_seq1.mrna1
Chr2	gffcl	locus	138806972	140591473	.	+	.	ID=RLOC_00022057;geneIDs=comp162599_c1_seq1.path1;transcripts=comp162599_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138806972	140591473	.	+	.	ID=comp162599_c1_seq1.mrna1;geneID=comp162599_c1_seq1.path1;Name=comp162599_c1_seq1;Dir=indeterminatecoverage=83.8;identity=92.8;matches=1517;mismatches=40;indels=77;unknowns=0;Target=comp162599_c1_seq1 130 44 .;locus=RLOC_00022057
Chr2	stalkie_big_nohaplotig	exon	138806972	138808361	91	+	.	Parent=comp162599_c1_seq1.mrna1;Target=comp162599_c1_seq1 1385 43 .
Chr2	stalkie_big_nohaplotig	exon	138808386	138808508	99	+	.	Parent=comp162599_c1_seq1.mrna1;Target=comp162599_c1_seq1 1544 1422 .
Chr2	stalkie_big_nohaplotig	exon	140489380	140489385	100	+	.	Parent=comp162599_c1_seq1.mrna1;Target=comp162599_c1_seq1 1550 1545 .
Chr2	stalkie_big_nohaplotig	exon	140491196	140491201	100	+	.	Parent=comp162599_c1_seq1.mrna1;Target=comp162599_c1_seq1 1556 1551 .
Chr2	stalkie_big_nohaplotig	exon	140503389	140503394	100	+	.	Parent=comp162599_c1_seq1.mrna1;Target=comp162599_c1_seq1 1562 1557 .
Chr2	stalkie_big_nohaplotig	exon	140509843	140509844	100	+	.	Parent=comp162599_c1_seq1.mrna1;Target=comp162599_c1_seq1 1564 1563 .
Chr2	stalkie_big_nohaplotig	exon	140510770	140510775	100	+	.	Parent=comp162599_c1_seq1.mrna1;Target=comp162599_c1_seq1 1570 1565 .
Chr2	stalkie_big_nohaplotig	exon	140517790	140517792	100	+	.	Parent=comp162599_c1_seq1.mrna1;Target=comp162599_c1_seq1 1573 1571 .
Chr2	stalkie_big_nohaplotig	exon	140517983	140517987	100	+	.	Parent=comp162599_c1_seq1.mrna1;Target=comp162599_c1_seq1 1578 1574 .
Chr2	stalkie_big_nohaplotig	exon	140523977	140523984	100	+	.	Parent=comp162599_c1_seq1.mrna1;Target=comp162599_c1_seq1 1586 1579 .
Chr2	stalkie_big_nohaplotig	exon	140535194	140535199	100	+	.	Parent=comp162599_c1_seq1.mrna1;Target=comp162599_c1_seq1 1592 1587 .
Chr2	stalkie_big_nohaplotig	exon	140538588	140538597	100	+	.	Parent=comp162599_c1_seq1.mrna1;Target=comp162599_c1_seq1 1602 1593 .
Chr2	stalkie_big_nohaplotig	exon	140539781	140539788	100	+	.	Parent=comp162599_c1_seq1.mrna1;Target=comp162599_c1_seq1 1617 1610 .
Chr2	stalkie_big_nohaplotig	exon	140552639	140552646	100	+	.	Parent=comp162599_c1_seq1.mrna1;Target=comp162599_c1_seq1 1658 1651 .
Chr2	stalkie_big_nohaplotig	exon	140559617	140559623	100	+	.	Parent=comp162599_c1_seq1.mrna1;Target=comp162599_c1_seq1 1665 1659 .
Chr2	stalkie_big_nohaplotig	exon	140572043	140572045	100	+	.	Parent=comp162599_c1_seq1.mrna1;Target=comp162599_c1_seq1 1669 1667 .
Chr2	stalkie_big_nohaplotig	exon	140579053	140579058	100	+	.	Parent=comp162599_c1_seq1.mrna1;Target=comp162599_c1_seq1 1675 1670 .
Chr2	stalkie_big_nohaplotig	exon	140586582	140586587	100	+	.	Parent=comp162599_c1_seq1.mrna1;Target=comp162599_c1_seq1 1681 1676 .
Chr2	stalkie_big_nohaplotig	exon	140591467	140591473	100	+	.	Parent=comp162599_c1_seq1.mrna1;Target=comp162599_c1_seq1 1688 1682 .
Chr2	stalkie_big_nohaplotig	CDS	138806973	138807057	.	+	0	Parent=comp162599_c1_seq1.mrna1
Chr2	gffcl	locus	138817802	138819979	.	+	.	ID=RLOC_00022058;geneIDs=FBgn0038057.1.path1;transcripts=FBgn0038057.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138817802	138819979	.	+	.	ID=FBgn0038057.1.mrna1;geneID=FBgn0038057.1.path1;Name=FBgn0038057.1;Dir=sensecoverage=100.0;identity=99.6;matches=1665;mismatches=6;indels=0;unknowns=0;locus=RLOC_00022058
Chr2	stalkie_big_nohaplotig	exon	138817802	138818050	99	+	.	Parent=FBgn0038057.1.mrna1;Target=FBgn0038057.1 1 249 +
Chr2	stalkie_big_nohaplotig	exon	138818111	138818238	96	+	.	Parent=FBgn0038057.1.mrna1;Target=FBgn0038057.1 250 377 +
Chr2	stalkie_big_nohaplotig	exon	138818303	138818646	100	+	.	Parent=FBgn0038057.1.mrna1;Target=FBgn0038057.1 378 721 +
Chr2	stalkie_big_nohaplotig	exon	138818716	138818870	100	+	.	Parent=FBgn0038057.1.mrna1;Target=FBgn0038057.1 722 876 +
Chr2	stalkie_big_nohaplotig	exon	138818935	138819043	100	+	.	Parent=FBgn0038057.1.mrna1;Target=FBgn0038057.1 877 985 +
Chr2	stalkie_big_nohaplotig	exon	138819104	138819453	100	+	.	Parent=FBgn0038057.1.mrna1;Target=FBgn0038057.1 986 1335 +
Chr2	stalkie_big_nohaplotig	exon	138819580	138819747	100	+	.	Parent=FBgn0038057.1.mrna1;Target=FBgn0038057.1 1336 1503 +
Chr2	stalkie_big_nohaplotig	exon	138819812	138819979	100	+	.	Parent=FBgn0038057.1.mrna1;Target=FBgn0038057.1 1504 1671 +
Chr2	stalkie_big_nohaplotig	CDS	138817802	138818050	.	+	0	Parent=FBgn0038057.1.mrna1;Target=FBgn0038057.1 1 249 +
Chr2	stalkie_big_nohaplotig	CDS	138818111	138818238	.	+	0	Parent=FBgn0038057.1.mrna1;Target=FBgn0038057.1 250 377 +
Chr2	stalkie_big_nohaplotig	CDS	138818303	138818646	.	+	1	Parent=FBgn0038057.1.mrna1;Target=FBgn0038057.1 378 721 +
Chr2	stalkie_big_nohaplotig	CDS	138818716	138818870	.	+	2	Parent=FBgn0038057.1.mrna1;Target=FBgn0038057.1 722 876 +
Chr2	stalkie_big_nohaplotig	CDS	138818935	138819043	.	+	0	Parent=FBgn0038057.1.mrna1;Target=FBgn0038057.1 877 985 +
Chr2	stalkie_big_nohaplotig	CDS	138819104	138819453	.	+	2	Parent=FBgn0038057.1.mrna1;Target=FBgn0038057.1 986 1335 +
Chr2	stalkie_big_nohaplotig	CDS	138819580	138819747	.	+	0	Parent=FBgn0038057.1.mrna1;Target=FBgn0038057.1 1336 1503 +
Chr2	stalkie_big_nohaplotig	CDS	138819812	138819979	.	+	0	Parent=FBgn0038057.1.mrna1;Target=FBgn0038057.1 1504 1671 +
Chr2	gffcl	locus	138820570	138829090	.	-	.	ID=RLOC_00022059;geneIDs=FBgn0039084.1.path1;transcripts=FBgn0039084.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138820570	138829090	.	-	.	ID=FBgn0039084.1.mrna1;geneID=FBgn0039084.1.path1;Name=FBgn0039084.1;Dir=sensecoverage=91.5;identity=99.4;matches=1763;mismatches=10;indels=0;unknowns=0;locus=RLOC_00022059
Chr2	stalkie_big_nohaplotig	exon	138820570	138820759	100	-	.	Parent=FBgn0039084.1.mrna1;Target=FBgn0039084.1 1749 1938 +
Chr2	stalkie_big_nohaplotig	exon	138820896	138821176	100	-	.	Parent=FBgn0039084.1.mrna1;Target=FBgn0039084.1 1468 1748 +
Chr2	stalkie_big_nohaplotig	exon	138821240	138821409	100	-	.	Parent=FBgn0039084.1.mrna1;Target=FBgn0039084.1 1298 1467 +
Chr2	stalkie_big_nohaplotig	exon	138821692	138822229	99	-	.	Parent=FBgn0039084.1.mrna1;Target=FBgn0039084.1 760 1297 +
Chr2	stalkie_big_nohaplotig	exon	138822297	138822486	98	-	.	Parent=FBgn0039084.1.mrna1;Target=FBgn0039084.1 570 759 +
Chr2	stalkie_big_nohaplotig	exon	138822558	138822719	99	-	.	Parent=FBgn0039084.1.mrna1;Target=FBgn0039084.1 408 569 +
Chr2	stalkie_big_nohaplotig	exon	138822788	138822924	99	-	.	Parent=FBgn0039084.1.mrna1;Target=FBgn0039084.1 271 407 +
Chr2	stalkie_big_nohaplotig	exon	138828986	138829090	99	-	.	Parent=FBgn0039084.1.mrna1;Target=FBgn0039084.1 166 270 +
Chr2	stalkie_big_nohaplotig	CDS	138820570	138820759	.	-	1	Parent=FBgn0039084.1.mrna1;Target=FBgn0039084.1 1749 1938 +
Chr2	stalkie_big_nohaplotig	CDS	138820896	138821176	.	-	0	Parent=FBgn0039084.1.mrna1;Target=FBgn0039084.1 1468 1748 +
Chr2	stalkie_big_nohaplotig	CDS	138821240	138821409	.	-	2	Parent=FBgn0039084.1.mrna1;Target=FBgn0039084.1 1298 1467 +
Chr2	stalkie_big_nohaplotig	CDS	138821692	138822229	.	-	0	Parent=FBgn0039084.1.mrna1;Target=FBgn0039084.1 760 1297 +
Chr2	stalkie_big_nohaplotig	CDS	138822297	138822486	.	-	1	Parent=FBgn0039084.1.mrna1;Target=FBgn0039084.1 570 759 +
Chr2	stalkie_big_nohaplotig	CDS	138822558	138822719	.	-	1	Parent=FBgn0039084.1.mrna1;Target=FBgn0039084.1 408 569 +
Chr2	stalkie_big_nohaplotig	CDS	138822788	138822924	.	-	0	Parent=FBgn0039084.1.mrna1;Target=FBgn0039084.1 271 407 +
Chr2	stalkie_big_nohaplotig	CDS	138828986	138829090	.	-	0	Parent=FBgn0039084.1.mrna1;Target=FBgn0039084.1 166 270 +
Chr2	gffcl	locus	138865333	138865836	.	-	.	ID=RLOC_00022060;geneIDs=comp149643_c0_seq1.path1;transcripts=comp149643_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138865333	138865836	.	-	.	ID=comp149643_c0_seq1.mrna1;geneID=comp149643_c0_seq1.path1;Name=comp149643_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=501;mismatches=3;indels=1;unknowns=0;Target=comp149643_c0_seq1 505 1 .;CDS_Target=comp149643_c0_seq1 221 81 .;locus=RLOC_00022060
Chr2	stalkie_big_nohaplotig	exon	138865333	138865836	99	-	.	Parent=comp149643_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138865617	138865756	.	-	0	Parent=comp149643_c0_seq1.mrna1
Chr2	gffcl	locus	138866990	138870120	.	-	.	ID=RLOC_00022061;geneIDs=FBgn0039489.1.path1,comp158704_c1_seq1.path1;transcripts=comp158704_c1_seq1.mrna1,FBgn0039489.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138866990	138870120	.	-	.	ID=comp158704_c1_seq1.mrna1;geneID=comp158704_c1_seq1.path1;Name=comp158704_c1_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=1540;mismatches=4;indels=3;unknowns=0;locus=RLOC_00022061
Chr2	stalkie_big_nohaplotig	exon	138866990	138867280	98	-	.	Parent=comp158704_c1_seq1.mrna1;Target=comp158704_c1_seq1 1 291 -
Chr2	stalkie_big_nohaplotig	exon	138867335	138867660	100	-	.	Parent=comp158704_c1_seq1.mrna1;Target=comp158704_c1_seq1 292 617 -
Chr2	stalkie_big_nohaplotig	exon	138867737	138867948	100	-	.	Parent=comp158704_c1_seq1.mrna1;Target=comp158704_c1_seq1 618 829 -
Chr2	stalkie_big_nohaplotig	exon	138869226	138869343	100	-	.	Parent=comp158704_c1_seq1.mrna1;Target=comp158704_c1_seq1 830 947 -
Chr2	stalkie_big_nohaplotig	exon	138869400	138869591	100	-	.	Parent=comp158704_c1_seq1.mrna1;Target=comp158704_c1_seq1 948 1139 -
Chr2	stalkie_big_nohaplotig	exon	138869653	138869800	100	-	.	Parent=comp158704_c1_seq1.mrna1;Target=comp158704_c1_seq1 1140 1287 -
Chr2	stalkie_big_nohaplotig	exon	138869864	138870120	98	-	.	Parent=comp158704_c1_seq1.mrna1;Target=comp158704_c1_seq1 1288 1547 -
Chr2	stalkie_big_nohaplotig	CDS	138869741	138869800	.	-	1	Parent=comp158704_c1_seq1.mrna1;Target=comp158704_c1_seq1 1228 1287 .
Chr2	stalkie_big_nohaplotig	CDS	138869864	138869910	.	-	0	Parent=comp158704_c1_seq1.mrna1;Target=comp158704_c1_seq1 1288 1335 .
Chr2	stalkie_big_nohaplotig	mRNA	138867193	138869906	.	-	.	ID=FBgn0039489.1.mrna1;geneID=FBgn0039489.1.path1;Name=FBgn0039489.1;Dir=sensecoverage=100.0;identity=99.0;matches=1124;mismatches=4;indels=7;unknowns=0;locus=RLOC_00022061
Chr2	stalkie_big_nohaplotig	exon	138867193	138867280	97	-	.	Parent=FBgn0039489.1.mrna1;Target=FBgn0039489.1 1041 1128 +
Chr2	stalkie_big_nohaplotig	exon	138867335	138867660	100	-	.	Parent=FBgn0039489.1.mrna1;Target=FBgn0039489.1 715 1040 +
Chr2	stalkie_big_nohaplotig	exon	138867737	138867948	100	-	.	Parent=FBgn0039489.1.mrna1;Target=FBgn0039489.1 503 714 +
Chr2	stalkie_big_nohaplotig	exon	138869226	138869343	100	-	.	Parent=FBgn0039489.1.mrna1;Target=FBgn0039489.1 385 502 +
Chr2	stalkie_big_nohaplotig	exon	138869400	138869591	100	-	.	Parent=FBgn0039489.1.mrna1;Target=FBgn0039489.1 193 384 +
Chr2	stalkie_big_nohaplotig	exon	138869653	138869816	94	-	.	Parent=FBgn0039489.1.mrna1;Target=FBgn0039489.1 36 192 +
Chr2	stalkie_big_nohaplotig	exon	138869872	138869906	100	-	.	Parent=FBgn0039489.1.mrna1;Target=FBgn0039489.1 1 35 +
Chr2	stalkie_big_nohaplotig	CDS	138869809	138869816	.	-	2	Parent=FBgn0039489.1.mrna1;Target=FBgn0039489.1 36 43 +
Chr2	stalkie_big_nohaplotig	CDS	138869872	138869905	.	-	0	Parent=FBgn0039489.1.mrna1;Target=FBgn0039489.1 2 35 +
Chr2	gffcl	locus	138868446	139116432	.	.	.	ID=RLOC_00022062;geneIDs=comp142609_c0_seq1.path1,comp157099_c0_seq1.path1;transcripts=comp157099_c0_seq1.mrna1,comp142609_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138868446	139116432	.	-	.	ID=comp157099_c0_seq1.mrna1;geneID=comp157099_c0_seq1.path1;Name=comp157099_c0_seq1;Dir=indeterminatecoverage=56.7;identity=87.3;matches=358;mismatches=23;indels=29;unknowns=0;Target=comp157099_c0_seq1 617 537 .;locus=RLOC_00022062
Chr2	stalkie_big_nohaplotig	exon	138868446	138868713	94	-	.	Parent=comp157099_c0_seq1.mrna1;Target=comp157099_c0_seq1 718 460 .
Chr2	stalkie_big_nohaplotig	exon	139016819	139016829	100	-	.	Parent=comp157099_c0_seq1.mrna1;Target=comp157099_c0_seq1 459 449 .
Chr2	stalkie_big_nohaplotig	exon	139019277	139019323	47	-	.	Parent=comp157099_c0_seq1.mrna1;Target=comp157099_c0_seq1 448 382 .
Chr2	stalkie_big_nohaplotig	exon	139022493	139022499	100	-	.	Parent=comp157099_c0_seq1.mrna1;Target=comp157099_c0_seq1 381 375 .
Chr2	stalkie_big_nohaplotig	exon	139023132	139023138	100	-	.	Parent=comp157099_c0_seq1.mrna1;Target=comp157099_c0_seq1 374 368 .
Chr2	stalkie_big_nohaplotig	exon	139030180	139030186	100	-	.	Parent=comp157099_c0_seq1.mrna1;Target=comp157099_c0_seq1 362 356 .
Chr2	stalkie_big_nohaplotig	exon	139054912	139054925	85	-	.	Parent=comp157099_c0_seq1.mrna1;Target=comp157099_c0_seq1 355 342 .
Chr2	stalkie_big_nohaplotig	exon	139056440	139056442	100	-	.	Parent=comp157099_c0_seq1.mrna1;Target=comp157099_c0_seq1 341 339 .
Chr2	stalkie_big_nohaplotig	exon	139064616	139064618	100	-	.	Parent=comp157099_c0_seq1.mrna1;Target=comp157099_c0_seq1 338 336 .
Chr2	stalkie_big_nohaplotig	exon	139070343	139070346	100	-	.	Parent=comp157099_c0_seq1.mrna1;Target=comp157099_c0_seq1 335 332 .
Chr2	stalkie_big_nohaplotig	exon	139078423	139078425	100	-	.	Parent=comp157099_c0_seq1.mrna1;Target=comp157099_c0_seq1 331 329 .
Chr2	stalkie_big_nohaplotig	exon	139101934	139101935	100	-	.	Parent=comp157099_c0_seq1.mrna1;Target=comp157099_c0_seq1 328 327 .
Chr2	stalkie_big_nohaplotig	exon	139109686	139109691	100	-	.	Parent=comp157099_c0_seq1.mrna1;Target=comp157099_c0_seq1 319 314 .
Chr2	stalkie_big_nohaplotig	exon	139116425	139116432	100	-	.	Parent=comp157099_c0_seq1.mrna1;Target=comp157099_c0_seq1 313 306 .
Chr2	stalkie_big_nohaplotig	CDS	138868547	138868627	.	-	0	Parent=comp157099_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139054778	139055539	.	+	.	ID=comp142609_c0_seq1.mrna1;geneID=comp142609_c0_seq1.path1;Name=comp142609_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=758;mismatches=3;indels=2;unknowns=0;Target=comp142609_c0_seq1 762 1 .;CDS_Target=comp142609_c0_seq1 570 460 .;locus=RLOC_00022062
Chr2	stalkie_big_nohaplotig	exon	139054778	139055539	99	+	.	Parent=comp142609_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139055236	139055346	.	+	0	Parent=comp142609_c0_seq1.mrna1
Chr2	gffcl	locus	138871394	138873815	.	+	.	ID=RLOC_00022063;geneIDs=FBgn0037780.1.path1;transcripts=FBgn0037780.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138871394	138873815	.	+	.	ID=FBgn0037780.1.mrna1;geneID=FBgn0037780.1.path1;Name=FBgn0037780.1;Dir=sensecoverage=100.0;identity=99.8;matches=1736;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022063
Chr2	stalkie_big_nohaplotig	exon	138871394	138871442	100	+	.	Parent=FBgn0037780.1.mrna1;Target=FBgn0037780.1 1 49 +
Chr2	stalkie_big_nohaplotig	exon	138871526	138871774	100	+	.	Parent=FBgn0037780.1.mrna1;Target=FBgn0037780.1 50 298 +
Chr2	stalkie_big_nohaplotig	exon	138871834	138872470	99	+	.	Parent=FBgn0037780.1.mrna1;Target=FBgn0037780.1 299 935 +
Chr2	stalkie_big_nohaplotig	exon	138872545	138872944	100	+	.	Parent=FBgn0037780.1.mrna1;Target=FBgn0037780.1 936 1335 +
Chr2	stalkie_big_nohaplotig	exon	138873008	138873113	100	+	.	Parent=FBgn0037780.1.mrna1;Target=FBgn0037780.1 1336 1441 +
Chr2	stalkie_big_nohaplotig	exon	138873449	138873545	100	+	.	Parent=FBgn0037780.1.mrna1;Target=FBgn0037780.1 1442 1538 +
Chr2	stalkie_big_nohaplotig	exon	138873614	138873815	99	+	.	Parent=FBgn0037780.1.mrna1;Target=FBgn0037780.1 1539 1740 +
Chr2	stalkie_big_nohaplotig	CDS	138871394	138871442	.	+	0	Parent=FBgn0037780.1.mrna1;Target=FBgn0037780.1 1 49 +
Chr2	stalkie_big_nohaplotig	CDS	138871526	138871774	.	+	2	Parent=FBgn0037780.1.mrna1;Target=FBgn0037780.1 50 298 +
Chr2	stalkie_big_nohaplotig	CDS	138871834	138872470	.	+	2	Parent=FBgn0037780.1.mrna1;Target=FBgn0037780.1 299 935 +
Chr2	stalkie_big_nohaplotig	CDS	138872545	138872944	.	+	1	Parent=FBgn0037780.1.mrna1;Target=FBgn0037780.1 936 1335 +
Chr2	stalkie_big_nohaplotig	CDS	138873008	138873113	.	+	0	Parent=FBgn0037780.1.mrna1;Target=FBgn0037780.1 1336 1441 +
Chr2	stalkie_big_nohaplotig	CDS	138873449	138873545	.	+	2	Parent=FBgn0037780.1.mrna1;Target=FBgn0037780.1 1442 1538 +
Chr2	stalkie_big_nohaplotig	CDS	138873614	138873815	.	+	1	Parent=FBgn0037780.1.mrna1;Target=FBgn0037780.1 1539 1740 +
Chr2	gffcl	locus	138874274	138875568	.	-	.	ID=RLOC_00022064;geneIDs=FBgn0037781.1.path1;transcripts=FBgn0037781.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138874274	138875568	.	-	.	ID=FBgn0037781.1.mrna1;geneID=FBgn0037781.1.path1;Name=FBgn0037781.1;Dir=sensecoverage=100.0;identity=99.1;matches=1160;mismatches=10;indels=0;unknowns=0;locus=RLOC_00022064
Chr2	stalkie_big_nohaplotig	exon	138874274	138874297	100	-	.	Parent=FBgn0037781.1.mrna1;Target=FBgn0037781.1 1147 1170 +
Chr2	stalkie_big_nohaplotig	exon	138874354	138875361	99	-	.	Parent=FBgn0037781.1.mrna1;Target=FBgn0037781.1 139 1146 +
Chr2	stalkie_big_nohaplotig	exon	138875431	138875568	97	-	.	Parent=FBgn0037781.1.mrna1;Target=FBgn0037781.1 1 138 +
Chr2	stalkie_big_nohaplotig	CDS	138874274	138874297	.	-	0	Parent=FBgn0037781.1.mrna1;Target=FBgn0037781.1 1147 1170 +
Chr2	stalkie_big_nohaplotig	CDS	138874354	138875361	.	-	0	Parent=FBgn0037781.1.mrna1;Target=FBgn0037781.1 139 1146 +
Chr2	stalkie_big_nohaplotig	CDS	138875431	138875568	.	-	0	Parent=FBgn0037781.1.mrna1;Target=FBgn0037781.1 1 138 +
Chr2	gffcl	locus	138879024	138883006	.	+	.	ID=RLOC_00022065;geneIDs=FBgn0051410.1.path1;transcripts=FBgn0051410.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138879024	138883006	.	+	.	ID=FBgn0051410.1.mrna1;geneID=FBgn0051410.1.path1;Name=FBgn0051410.1;Dir=sensecoverage=100.0;identity=100.0;matches=492;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022065
Chr2	stalkie_big_nohaplotig	exon	138879024	138879105	100	+	.	Parent=FBgn0051410.1.mrna1;Target=FBgn0051410.1 1 82 +
Chr2	stalkie_big_nohaplotig	exon	138882532	138882642	100	+	.	Parent=FBgn0051410.1.mrna1;Target=FBgn0051410.1 83 193 +
Chr2	stalkie_big_nohaplotig	exon	138882708	138883006	100	+	.	Parent=FBgn0051410.1.mrna1;Target=FBgn0051410.1 194 492 +
Chr2	stalkie_big_nohaplotig	CDS	138879024	138879105	.	+	0	Parent=FBgn0051410.1.mrna1;Target=FBgn0051410.1 1 82 +
Chr2	stalkie_big_nohaplotig	CDS	138882532	138882642	.	+	2	Parent=FBgn0051410.1.mrna1;Target=FBgn0051410.1 83 193 +
Chr2	stalkie_big_nohaplotig	CDS	138882708	138883006	.	+	2	Parent=FBgn0051410.1.mrna1;Target=FBgn0051410.1 194 492 +
Chr2	gffcl	locus	138889252	138889905	.	-	.	ID=RLOC_00022066;geneIDs=FBgn0037782.1.path1;transcripts=FBgn0037782.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138889252	138889905	.	-	.	ID=FBgn0037782.1.mrna1;geneID=FBgn0037782.1.path1;Name=FBgn0037782.1;Dir=sensecoverage=99.8;identity=98.9;matches=521;mismatches=3;indels=3;unknowns=0;locus=RLOC_00022066
Chr2	stalkie_big_nohaplotig	exon	138889252	138889549	98	-	.	Parent=FBgn0037782.1.mrna1;Target=FBgn0037782.1 230 527 +
Chr2	stalkie_big_nohaplotig	exon	138889617	138889727	100	-	.	Parent=FBgn0037782.1.mrna1;Target=FBgn0037782.1 119 229 +
Chr2	stalkie_big_nohaplotig	exon	138889791	138889905	97	-	.	Parent=FBgn0037782.1.mrna1;Target=FBgn0037782.1 1 118 +
Chr2	stalkie_big_nohaplotig	CDS	138889254	138889549	.	-	2	Parent=FBgn0037782.1.mrna1;Target=FBgn0037782.1 230 525 +
Chr2	stalkie_big_nohaplotig	CDS	138889617	138889727	.	-	2	Parent=FBgn0037782.1.mrna1;Target=FBgn0037782.1 119 229 +
Chr2	stalkie_big_nohaplotig	CDS	138889791	138889905	.	-	0	Parent=FBgn0037782.1.mrna1;Target=FBgn0037782.1 1 118 +
Chr2	gffcl	locus	138908867	138921007	.	-	.	ID=RLOC_00022067;geneIDs=comp150868_c0_seq1.path1;transcripts=comp150868_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138908867	138921007	.	-	.	ID=comp150868_c0_seq1.mrna1;geneID=comp150868_c0_seq1.path1;Name=comp150868_c0_seq1;Dir=sensecoverage=100.0;identity=98.8;matches=825;mismatches=7;indels=3;unknowns=0;Target=comp150868_c0_seq1 176 349 +;locus=RLOC_00022067
Chr2	stalkie_big_nohaplotig	exon	138908867	138909596	98	-	.	Parent=comp150868_c0_seq1.mrna1;Target=comp150868_c0_seq1 106 832 +
Chr2	stalkie_big_nohaplotig	exon	138920903	138921007	100	-	.	Parent=comp150868_c0_seq1.mrna1;Target=comp150868_c0_seq1 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	138909353	138909526	.	-	0	Parent=comp150868_c0_seq1.mrna1
Chr2	gffcl	locus	138936067	138936511	.	+	.	ID=RLOC_00022068;geneIDs=comp162195_c0_seq1.path1;transcripts=comp162195_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138936067	138936511	.	+	.	ID=comp162195_c0_seq1.mrna1;geneID=comp162195_c0_seq1.path1;Name=comp162195_c0_seq1;Dir=indeterminatecoverage=26.1;identity=83.1;matches=388;mismatches=6;indels=73;unknowns=0;Target=comp162195_c0_seq1 1579 1164 .;CDS_Target=comp162195_c0_seq1 1578 1228 .;locus=RLOC_00022068
Chr2	stalkie_big_nohaplotig	exon	138936067	138936511	83	+	.	Parent=comp162195_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138936114	138936510	.	+	0	Parent=comp162195_c0_seq1.mrna1
Chr2	gffcl	locus	138937530	138938101	.	+	.	ID=RLOC_00022069;geneIDs=comp147031_c0_seq1.path1;transcripts=comp147031_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138937530	138938101	.	+	.	ID=comp147031_c0_seq1.mrna1;geneID=comp147031_c0_seq1.path1;Name=comp147031_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.3;matches=568;mismatches=4;indels=0;unknowns=0;Target=comp147031_c0_seq1 572 1 .;CDS_Target=comp147031_c0_seq1 486 397 .;locus=RLOC_00022069
Chr2	stalkie_big_nohaplotig	exon	138937530	138938101	99	+	.	Parent=comp147031_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138937926	138938015	.	+	0	Parent=comp147031_c0_seq1.mrna1
Chr2	gffcl	locus	138955572	138956322	.	+	.	ID=RLOC_00022070;geneIDs=FBgn0037783.1.path1;transcripts=FBgn0037783.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138955572	138956322	.	+	.	ID=FBgn0037783.1.mrna1;geneID=FBgn0037783.1.path1;Name=FBgn0037783.1;Dir=sensecoverage=100.0;identity=99.0;matches=487;mismatches=5;indels=0;unknowns=0;locus=RLOC_00022070
Chr2	stalkie_big_nohaplotig	exon	138955572	138955674	97	+	.	Parent=FBgn0037783.1.mrna1;Target=FBgn0037783.1 1 103 +
Chr2	stalkie_big_nohaplotig	exon	138955797	138955907	99	+	.	Parent=FBgn0037783.1.mrna1;Target=FBgn0037783.1 104 214 +
Chr2	stalkie_big_nohaplotig	exon	138956045	138956322	99	+	.	Parent=FBgn0037783.1.mrna1;Target=FBgn0037783.1 215 492 +
Chr2	stalkie_big_nohaplotig	CDS	138955572	138955674	.	+	0	Parent=FBgn0037783.1.mrna1;Target=FBgn0037783.1 1 103 +
Chr2	stalkie_big_nohaplotig	CDS	138955797	138955907	.	+	2	Parent=FBgn0037783.1.mrna1;Target=FBgn0037783.1 104 214 +
Chr2	stalkie_big_nohaplotig	CDS	138956045	138956322	.	+	2	Parent=FBgn0037783.1.mrna1;Target=FBgn0037783.1 215 492 +
Chr2	gffcl	locus	138973163	138974518	.	-	.	ID=RLOC_00022071;geneIDs=FBgn0027338.4.path1;transcripts=FBgn0027338.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138973163	138974518	.	-	.	ID=FBgn0027338.4.mrna1;geneID=FBgn0027338.4.path1;Name=FBgn0027338.4;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1349;mismatches=7;indels=0;unknowns=0;Target=FBgn0027338.4 1356 1 .;locus=RLOC_00022071
Chr2	stalkie_big_nohaplotig	exon	138973163	138974518	99	-	.	Parent=FBgn0027338.4.mrna1
Chr2	stalkie_big_nohaplotig	CDS	138973163	138974518	.	-	0	Parent=FBgn0027338.4.mrna1
Chr2	gffcl	locus	138992788	138993935	.	-	.	ID=RLOC_00022072;geneIDs=FBgn0032779.1.path1;transcripts=FBgn0032779.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	138992788	138993935	.	-	.	ID=FBgn0032779.1.mrna1;geneID=FBgn0032779.1.path1;Name=FBgn0032779.1;Dir=sensecoverage=100.0;identity=99.4;matches=1070;mismatches=6;indels=1;unknowns=0;locus=RLOC_00022072
Chr2	stalkie_big_nohaplotig	exon	138992788	138993434	98	-	.	Parent=FBgn0032779.1.mrna1;Target=FBgn0032779.1 430 1077 +
Chr2	stalkie_big_nohaplotig	exon	138993507	138993935	100	-	.	Parent=FBgn0032779.1.mrna1;Target=FBgn0032779.1 1 429 +
Chr2	stalkie_big_nohaplotig	CDS	138992788	138993434	.	-	0	Parent=FBgn0032779.1.mrna1;Target=FBgn0032779.1 430 1077 +
Chr2	stalkie_big_nohaplotig	CDS	138993507	138993935	.	-	0	Parent=FBgn0032779.1.mrna1;Target=FBgn0032779.1 1 429 +
Chr2	gffcl	locus	139039586	139039940	.	+	.	ID=RLOC_00022073;geneIDs=comp143084_c0_seq1.path1;transcripts=comp143084_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139039586	139039940	.	+	.	ID=comp143084_c0_seq1.mrna1;geneID=comp143084_c0_seq1.path1;Name=comp143084_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=350;mismatches=2;indels=3;unknowns=0;Target=comp143084_c0_seq1 352 1 .;CDS_Target=comp143084_c0_seq1 201 139 .;locus=RLOC_00022073
Chr2	stalkie_big_nohaplotig	exon	139039586	139039940	98	+	.	Parent=comp143084_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139039724	139039786	.	+	0	Parent=comp143084_c0_seq1.mrna1
Chr2	gffcl	locus	139051493	139052529	.	+	.	ID=RLOC_00022074;geneIDs=comp162225_c0_seq1.path1;transcripts=comp162225_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139051493	139052529	.	+	.	ID=comp162225_c0_seq1.mrna1;geneID=comp162225_c0_seq1.path1;Name=comp162225_c0_seq1;Dir=indeterminatecoverage=96.1;identity=97.9;matches=1018;mismatches=19;indels=3;unknowns=0;Target=comp162225_c0_seq1 1081 42 .;CDS_Target=comp162225_c0_seq1 1038 877 .;locus=RLOC_00022074
Chr2	stalkie_big_nohaplotig	exon	139051493	139052529	97	+	.	Parent=comp162225_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139052325	139052486	.	+	0	Parent=comp162225_c0_seq1.mrna1
Chr2	gffcl	locus	139055922	139068530	.	-	.	ID=RLOC_00022075;geneIDs=FBgn0028734.1.path1;transcripts=FBgn0028734.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139055922	139068530	.	-	.	ID=FBgn0028734.1.mrna1;geneID=FBgn0028734.1.path1;Name=FBgn0028734.1;Dir=sensecoverage=100.0;identity=99.7;matches=1843;mismatches=2;indels=3;unknowns=0;locus=RLOC_00022075
Chr2	stalkie_big_nohaplotig	exon	139055922	139056208	98	-	.	Parent=FBgn0028734.1.mrna1;Target=FBgn0028734.1 1562 1845 +
Chr2	stalkie_big_nohaplotig	exon	139058409	139058471	100	-	.	Parent=FBgn0028734.1.mrna1;Target=FBgn0028734.1 1499 1561 +
Chr2	stalkie_big_nohaplotig	exon	139058535	139058717	100	-	.	Parent=FBgn0028734.1.mrna1;Target=FBgn0028734.1 1316 1498 +
Chr2	stalkie_big_nohaplotig	exon	139058779	139059004	100	-	.	Parent=FBgn0028734.1.mrna1;Target=FBgn0028734.1 1090 1315 +
Chr2	stalkie_big_nohaplotig	exon	139059079	139059210	100	-	.	Parent=FBgn0028734.1.mrna1;Target=FBgn0028734.1 958 1089 +
Chr2	stalkie_big_nohaplotig	exon	139059296	139059593	100	-	.	Parent=FBgn0028734.1.mrna1;Target=FBgn0028734.1 660 957 +
Chr2	stalkie_big_nohaplotig	exon	139060400	139060467	100	-	.	Parent=FBgn0028734.1.mrna1;Target=FBgn0028734.1 592 659 +
Chr2	stalkie_big_nohaplotig	exon	139060531	139060696	100	-	.	Parent=FBgn0028734.1.mrna1;Target=FBgn0028734.1 426 591 +
Chr2	stalkie_big_nohaplotig	exon	139061967	139062284	100	-	.	Parent=FBgn0028734.1.mrna1;Target=FBgn0028734.1 108 425 +
Chr2	stalkie_big_nohaplotig	exon	139063442	139063491	100	-	.	Parent=FBgn0028734.1.mrna1;Target=FBgn0028734.1 58 107 +
Chr2	stalkie_big_nohaplotig	exon	139068474	139068530	100	-	.	Parent=FBgn0028734.1.mrna1;Target=FBgn0028734.1 1 57 +
Chr2	stalkie_big_nohaplotig	CDS	139055922	139056208	.	-	2	Parent=FBgn0028734.1.mrna1;Target=FBgn0028734.1 1562 1845 +
Chr2	stalkie_big_nohaplotig	CDS	139058409	139058471	.	-	2	Parent=FBgn0028734.1.mrna1;Target=FBgn0028734.1 1499 1561 +
Chr2	stalkie_big_nohaplotig	CDS	139058535	139058717	.	-	2	Parent=FBgn0028734.1.mrna1;Target=FBgn0028734.1 1316 1498 +
Chr2	stalkie_big_nohaplotig	CDS	139058779	139059004	.	-	0	Parent=FBgn0028734.1.mrna1;Target=FBgn0028734.1 1090 1315 +
Chr2	stalkie_big_nohaplotig	CDS	139059079	139059210	.	-	0	Parent=FBgn0028734.1.mrna1;Target=FBgn0028734.1 958 1089 +
Chr2	stalkie_big_nohaplotig	CDS	139059296	139059593	.	-	1	Parent=FBgn0028734.1.mrna1;Target=FBgn0028734.1 660 957 +
Chr2	stalkie_big_nohaplotig	CDS	139060400	139060467	.	-	0	Parent=FBgn0028734.1.mrna1;Target=FBgn0028734.1 592 659 +
Chr2	stalkie_big_nohaplotig	CDS	139060531	139060696	.	-	1	Parent=FBgn0028734.1.mrna1;Target=FBgn0028734.1 426 591 +
Chr2	stalkie_big_nohaplotig	CDS	139061967	139062284	.	-	1	Parent=FBgn0028734.1.mrna1;Target=FBgn0028734.1 108 425 +
Chr2	stalkie_big_nohaplotig	CDS	139063442	139063491	.	-	0	Parent=FBgn0028734.1.mrna1;Target=FBgn0028734.1 58 107 +
Chr2	stalkie_big_nohaplotig	CDS	139068474	139068530	.	-	0	Parent=FBgn0028734.1.mrna1;Target=FBgn0028734.1 1 57 +
Chr2	gffcl	locus	139082995	139083341	.	-	.	ID=RLOC_00022076;geneIDs=comp150154_c0_seq1.path2;transcripts=comp150154_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	139082995	139083341	.	-	.	ID=comp150154_c0_seq1.mrna2;geneID=comp150154_c0_seq1.path2;Name=comp150154_c0_seq1;Dir=indeterminatecoverage=90.8;identity=99.1;matches=344;mismatches=3;indels=0;unknowns=0;Target=comp150154_c0_seq1 347 1 .;CDS_Target=comp150154_c0_seq1 149 78 .;locus=RLOC_00022076
Chr2	stalkie_big_nohaplotig	exon	139082995	139083341	99	-	.	Parent=comp150154_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	139083193	139083264	.	-	0	Parent=comp150154_c0_seq1.mrna2
Chr2	gffcl	locus	139104001	139105020	.	-	.	ID=RLOC_00022077;geneIDs=FBgn0039163.1.path1;transcripts=FBgn0039163.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139104001	139105020	.	-	.	ID=FBgn0039163.1.mrna1;geneID=FBgn0039163.1.path1;Name=FBgn0039163.1;Dir=sensecoverage=100.0;identity=99.1;matches=740;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022077
Chr2	stalkie_big_nohaplotig	exon	139104001	139104656	98	-	.	Parent=FBgn0039163.1.mrna1;Target=FBgn0039163.1 92 747 +
Chr2	stalkie_big_nohaplotig	exon	139104930	139105020	100	-	.	Parent=FBgn0039163.1.mrna1;Target=FBgn0039163.1 1 91 +
Chr2	stalkie_big_nohaplotig	CDS	139104001	139104656	.	-	2	Parent=FBgn0039163.1.mrna1;Target=FBgn0039163.1 92 747 +
Chr2	stalkie_big_nohaplotig	CDS	139104930	139105020	.	-	0	Parent=FBgn0039163.1.mrna1;Target=FBgn0039163.1 1 91 +
Chr2	gffcl	locus	139106688	139106930	.	+	.	ID=RLOC_00022078;geneIDs=FBgn0038224.1.path1;transcripts=FBgn0038224.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139106688	139106930	.	+	.	ID=FBgn0038224.1.mrna1;geneID=FBgn0038224.1.path1;Name=FBgn0038224.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=243;mismatches=0;indels=0;unknowns=0;Target=FBgn0038224.1 243 1 .;locus=RLOC_00022078
Chr2	stalkie_big_nohaplotig	exon	139106688	139106930	100	+	.	Parent=FBgn0038224.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139106688	139106930	.	+	0	Parent=FBgn0038224.1.mrna1
Chr2	gffcl	locus	139107716	139109002	.	+	.	ID=RLOC_00022079;geneIDs=FBgn0003480.1.path1;transcripts=FBgn0003480.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139107716	139109002	.	+	.	ID=FBgn0003480.1.mrna1;geneID=FBgn0003480.1.path1;Name=FBgn0003480.1;Dir=sensecoverage=100.0;identity=99.0;matches=1031;mismatches=10;indels=0;unknowns=0;locus=RLOC_00022079
Chr2	stalkie_big_nohaplotig	exon	139107716	139107800	100	+	.	Parent=FBgn0003480.1.mrna1;Target=FBgn0003480.1 1 85 +
Chr2	stalkie_big_nohaplotig	exon	139107863	139108000	99	+	.	Parent=FBgn0003480.1.mrna1;Target=FBgn0003480.1 86 223 +
Chr2	stalkie_big_nohaplotig	exon	139108051	139108391	97	+	.	Parent=FBgn0003480.1.mrna1;Target=FBgn0003480.1 224 564 +
Chr2	stalkie_big_nohaplotig	exon	139108451	139108654	99	+	.	Parent=FBgn0003480.1.mrna1;Target=FBgn0003480.1 565 768 +
Chr2	stalkie_big_nohaplotig	exon	139108730	139109002	100	+	.	Parent=FBgn0003480.1.mrna1;Target=FBgn0003480.1 769 1041 +
Chr2	stalkie_big_nohaplotig	CDS	139107716	139107800	.	+	0	Parent=FBgn0003480.1.mrna1;Target=FBgn0003480.1 1 85 +
Chr2	stalkie_big_nohaplotig	CDS	139107863	139108000	.	+	2	Parent=FBgn0003480.1.mrna1;Target=FBgn0003480.1 86 223 +
Chr2	stalkie_big_nohaplotig	CDS	139108051	139108391	.	+	2	Parent=FBgn0003480.1.mrna1;Target=FBgn0003480.1 224 564 +
Chr2	stalkie_big_nohaplotig	CDS	139108451	139108654	.	+	0	Parent=FBgn0003480.1.mrna1;Target=FBgn0003480.1 565 768 +
Chr2	stalkie_big_nohaplotig	CDS	139108730	139109002	.	+	0	Parent=FBgn0003480.1.mrna1;Target=FBgn0003480.1 769 1041 +
Chr2	gffcl	locus	139111335	139111629	.	-	.	ID=RLOC_00022080;geneIDs=comp152210_c0_seq1.path1;transcripts=comp152210_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139111335	139111629	.	-	.	ID=comp152210_c0_seq1.mrna1;geneID=comp152210_c0_seq1.path1;Name=comp152210_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=292;mismatches=3;indels=2;unknowns=0;Target=comp152210_c0_seq1 297 1 .;CDS_Target=comp152210_c0_seq1 295 218 .;locus=RLOC_00022080
Chr2	stalkie_big_nohaplotig	exon	139111335	139111629	98	-	.	Parent=comp152210_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139111337	139111414	.	-	0	Parent=comp152210_c0_seq1.mrna1
Chr2	gffcl	locus	139214584	139215327	.	-	.	ID=RLOC_00022081;geneIDs=comp142700_c0_seq1.path1;transcripts=comp142700_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139214584	139215327	.	-	.	ID=comp142700_c0_seq1.mrna1;geneID=comp142700_c0_seq1.path1;Name=comp142700_c0_seq1;Dir=indeterminatecoverage=98.5;identity=98.7;matches=734;mismatches=4;indels=6;unknowns=0;Target=comp142700_c0_seq1 738 1 .;CDS_Target=comp142700_c0_seq1 313 170 .;locus=RLOC_00022081
Chr2	stalkie_big_nohaplotig	exon	139214584	139215327	98	-	.	Parent=comp142700_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139215015	139215158	.	-	0	Parent=comp142700_c0_seq1.mrna1
Chr2	gffcl	locus	139258015	139258309	.	+	.	ID=RLOC_00022082;geneIDs=comp152210_c0_seq1.path2;transcripts=comp152210_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	139258015	139258309	.	+	.	ID=comp152210_c0_seq1.mrna2;geneID=comp152210_c0_seq1.path2;Name=comp152210_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=292;mismatches=3;indels=2;unknowns=0;Target=comp152210_c0_seq1 297 1 .;CDS_Target=comp152210_c0_seq1 295 218 .;locus=RLOC_00022082
Chr2	stalkie_big_nohaplotig	exon	139258015	139258309	98	+	.	Parent=comp152210_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	139258230	139258307	.	+	0	Parent=comp152210_c0_seq1.mrna2
Chr2	gffcl	locus	139261110	139262396	.	-	.	ID=RLOC_00022083;geneIDs=FBgn0003480.1.path2;transcripts=FBgn0003480.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	139261110	139262396	.	-	.	ID=FBgn0003480.1.mrna2;geneID=FBgn0003480.1.path2;Name=FBgn0003480.1;Dir=sensecoverage=100.0;identity=99.0;matches=1031;mismatches=10;indels=0;unknowns=0;locus=RLOC_00022083
Chr2	stalkie_big_nohaplotig	exon	139261110	139261382	100	-	.	Parent=FBgn0003480.1.mrna2;Target=FBgn0003480.1 769 1041 +
Chr2	stalkie_big_nohaplotig	exon	139261458	139261661	99	-	.	Parent=FBgn0003480.1.mrna2;Target=FBgn0003480.1 565 768 +
Chr2	stalkie_big_nohaplotig	exon	139261721	139262061	97	-	.	Parent=FBgn0003480.1.mrna2;Target=FBgn0003480.1 224 564 +
Chr2	stalkie_big_nohaplotig	exon	139262112	139262249	99	-	.	Parent=FBgn0003480.1.mrna2;Target=FBgn0003480.1 86 223 +
Chr2	stalkie_big_nohaplotig	exon	139262312	139262396	100	-	.	Parent=FBgn0003480.1.mrna2;Target=FBgn0003480.1 1 85 +
Chr2	stalkie_big_nohaplotig	CDS	139261110	139261382	.	-	0	Parent=FBgn0003480.1.mrna2;Target=FBgn0003480.1 769 1041 +
Chr2	stalkie_big_nohaplotig	CDS	139261458	139261661	.	-	0	Parent=FBgn0003480.1.mrna2;Target=FBgn0003480.1 565 768 +
Chr2	stalkie_big_nohaplotig	CDS	139261721	139262061	.	-	2	Parent=FBgn0003480.1.mrna2;Target=FBgn0003480.1 224 564 +
Chr2	stalkie_big_nohaplotig	CDS	139262112	139262249	.	-	2	Parent=FBgn0003480.1.mrna2;Target=FBgn0003480.1 86 223 +
Chr2	stalkie_big_nohaplotig	CDS	139262312	139262396	.	-	0	Parent=FBgn0003480.1.mrna2;Target=FBgn0003480.1 1 85 +
Chr2	gffcl	locus	139263182	139263424	.	-	.	ID=RLOC_00022084;geneIDs=FBgn0038224.1.path2;transcripts=FBgn0038224.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	139263182	139263424	.	-	.	ID=FBgn0038224.1.mrna2;geneID=FBgn0038224.1.path2;Name=FBgn0038224.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=243;mismatches=0;indels=0;unknowns=0;Target=FBgn0038224.1 243 1 .;locus=RLOC_00022084
Chr2	stalkie_big_nohaplotig	exon	139263182	139263424	100	-	.	Parent=FBgn0038224.1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	139263182	139263424	.	-	0	Parent=FBgn0038224.1.mrna2
Chr2	gffcl	locus	139264672	139265694	.	+	.	ID=RLOC_00022085;geneIDs=FBgn0039163.1.path2;transcripts=FBgn0039163.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	139264672	139265694	.	+	.	ID=FBgn0039163.1.mrna2;geneID=FBgn0039163.1.path2;Name=FBgn0039163.1;Dir=sensecoverage=100.0;identity=98.9;matches=739;mismatches=8;indels=0;unknowns=0;locus=RLOC_00022085
Chr2	stalkie_big_nohaplotig	exon	139264672	139264762	98	+	.	Parent=FBgn0039163.1.mrna2;Target=FBgn0039163.1 1 91 +
Chr2	stalkie_big_nohaplotig	exon	139265039	139265694	98	+	.	Parent=FBgn0039163.1.mrna2;Target=FBgn0039163.1 92 747 +
Chr2	stalkie_big_nohaplotig	CDS	139264672	139264762	.	+	0	Parent=FBgn0039163.1.mrna2;Target=FBgn0039163.1 1 91 +
Chr2	stalkie_big_nohaplotig	CDS	139265039	139265694	.	+	2	Parent=FBgn0039163.1.mrna2;Target=FBgn0039163.1 92 747 +
Chr2	gffcl	locus	139266415	139268239	.	-	.	ID=RLOC_00022086;geneIDs=FBgn0029503.1.path1;transcripts=FBgn0029503.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139266415	139268239	.	-	.	ID=FBgn0029503.1.mrna1;geneID=FBgn0029503.1.path1;Name=FBgn0029503.1;Dir=sensecoverage=100.0;identity=99.7;matches=1077;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022086
Chr2	stalkie_big_nohaplotig	exon	139266415	139266663	100	-	.	Parent=FBgn0029503.1.mrna1;Target=FBgn0029503.1 832 1080 +
Chr2	stalkie_big_nohaplotig	exon	139267246	139267440	98	-	.	Parent=FBgn0029503.1.mrna1;Target=FBgn0029503.1 637 831 +
Chr2	stalkie_big_nohaplotig	exon	139267496	139267712	99	-	.	Parent=FBgn0029503.1.mrna1;Target=FBgn0029503.1 420 636 +
Chr2	stalkie_big_nohaplotig	exon	139267769	139268120	100	-	.	Parent=FBgn0029503.1.mrna1;Target=FBgn0029503.1 68 419 +
Chr2	stalkie_big_nohaplotig	exon	139268173	139268239	100	-	.	Parent=FBgn0029503.1.mrna1;Target=FBgn0029503.1 1 67 +
Chr2	stalkie_big_nohaplotig	CDS	139266415	139266663	.	-	0	Parent=FBgn0029503.1.mrna1;Target=FBgn0029503.1 832 1080 +
Chr2	stalkie_big_nohaplotig	CDS	139267246	139267440	.	-	0	Parent=FBgn0029503.1.mrna1;Target=FBgn0029503.1 637 831 +
Chr2	stalkie_big_nohaplotig	CDS	139267496	139267712	.	-	1	Parent=FBgn0029503.1.mrna1;Target=FBgn0029503.1 420 636 +
Chr2	stalkie_big_nohaplotig	CDS	139267769	139268120	.	-	2	Parent=FBgn0029503.1.mrna1;Target=FBgn0029503.1 68 419 +
Chr2	stalkie_big_nohaplotig	CDS	139268173	139268239	.	-	0	Parent=FBgn0029503.1.mrna1;Target=FBgn0029503.1 1 67 +
Chr2	gffcl	locus	139286081	139286427	.	+	.	ID=RLOC_00022087;geneIDs=comp150154_c0_seq1.path1;transcripts=comp150154_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139286081	139286427	.	+	.	ID=comp150154_c0_seq1.mrna1;geneID=comp150154_c0_seq1.path1;Name=comp150154_c0_seq1;Dir=indeterminatecoverage=90.8;identity=99.7;matches=346;mismatches=1;indels=0;unknowns=0;Target=comp150154_c0_seq1 347 1 .;CDS_Target=comp150154_c0_seq1 149 78 .;locus=RLOC_00022087
Chr2	stalkie_big_nohaplotig	exon	139286081	139286427	99	+	.	Parent=comp150154_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139286158	139286229	.	+	0	Parent=comp150154_c0_seq1.mrna1
Chr2	gffcl	locus	139297650	139327219	.	-	.	ID=RLOC_00022088;geneIDs=comp148373_c1_seq1.path1;transcripts=comp148373_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139297650	139327219	.	-	.	ID=comp148373_c1_seq1.mrna1;geneID=comp148373_c1_seq1.path1;Name=comp148373_c1_seq1;Dir=antisensecoverage=98.3;identity=99.8;matches=1626;mismatches=3;indels=1;unknowns=0;locus=RLOC_00022088
Chr2	stalkie_big_nohaplotig	exon	139297650	139298452	99	-	.	Parent=comp148373_c1_seq1.mrna1;Target=comp148373_c1_seq1 1 804 -
Chr2	stalkie_big_nohaplotig	exon	139298755	139298853	100	-	.	Parent=comp148373_c1_seq1.mrna1;Target=comp148373_c1_seq1 805 903 -
Chr2	stalkie_big_nohaplotig	exon	139300261	139300420	100	-	.	Parent=comp148373_c1_seq1.mrna1;Target=comp148373_c1_seq1 904 1063 -
Chr2	stalkie_big_nohaplotig	exon	139326653	139327219	100	-	.	Parent=comp148373_c1_seq1.mrna1;Target=comp148373_c1_seq1 1064 1630 -
Chr2	stalkie_big_nohaplotig	CDS	139298433	139298452	.	-	2	Parent=comp148373_c1_seq1.mrna1;Target=comp148373_c1_seq1 785 804 .
Chr2	stalkie_big_nohaplotig	CDS	139298755	139298853	.	-	2	Parent=comp148373_c1_seq1.mrna1;Target=comp148373_c1_seq1 805 903 .
Chr2	stalkie_big_nohaplotig	CDS	139300261	139300420	.	-	0	Parent=comp148373_c1_seq1.mrna1;Target=comp148373_c1_seq1 904 1063 .
Chr2	stalkie_big_nohaplotig	CDS	139326653	139326661	.	-	0	Parent=comp148373_c1_seq1.mrna1;Target=comp148373_c1_seq1 1064 1072 .
Chr2	gffcl	locus	139307894	139308502	.	+	.	ID=RLOC_00022089;geneIDs=comp117615_c0_seq1.path1;transcripts=comp117615_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139307894	139308502	.	+	.	ID=comp117615_c0_seq1.mrna1;geneID=comp117615_c0_seq1.path1;Name=comp117615_c0_seq1;Dir=indeterminatecoverage=96.7;identity=99.7;matches=607;mismatches=2;indels=0;unknowns=0;Target=comp117615_c0_seq1 609 1 .;CDS_Target=comp117615_c0_seq1 543 418 .;locus=RLOC_00022089
Chr2	stalkie_big_nohaplotig	exon	139307894	139308502	99	+	.	Parent=comp117615_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139308311	139308436	.	+	0	Parent=comp117615_c0_seq1.mrna1
Chr2	gffcl	locus	139351754	139352202	.	-	.	ID=RLOC_00022090;geneIDs=comp554036_c0_seq1.path1;transcripts=comp554036_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139351754	139352202	.	-	.	ID=comp554036_c0_seq1.mrna1;geneID=comp554036_c0_seq1.path1;Name=comp554036_c0_seq1;Dir=indeterminatecoverage=97.4;identity=99.8;matches=448;mismatches=1;indels=0;unknowns=0;Target=comp554036_c0_seq1 461 13 .;CDS_Target=comp554036_c0_seq1 88 14 .;locus=RLOC_00022090
Chr2	stalkie_big_nohaplotig	exon	139351754	139352202	99	-	.	Parent=comp554036_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139352127	139352201	.	-	0	Parent=comp554036_c0_seq1.mrna1
Chr2	gffcl	locus	139353594	139354804	.	-	.	ID=RLOC_00022091;geneIDs=comp157834_c0_seq1.path1;transcripts=comp157834_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139353594	139354804	.	-	.	ID=comp157834_c0_seq1.mrna1;geneID=comp157834_c0_seq1.path1;Name=comp157834_c0_seq1;Dir=antisensecoverage=96.2;identity=95.2;matches=720;mismatches=24;indels=12;unknowns=0;Target=comp157834_c0_seq1 113 199 .;locus=RLOC_00022091
Chr2	stalkie_big_nohaplotig	exon	139353594	139353928	96	-	.	Parent=comp157834_c0_seq1.mrna1;Target=comp157834_c0_seq1 31 365 -
Chr2	stalkie_big_nohaplotig	exon	139354352	139354408	100	-	.	Parent=comp157834_c0_seq1.mrna1;Target=comp157834_c0_seq1 366 422 -
Chr2	stalkie_big_nohaplotig	exon	139354443	139354804	93	-	.	Parent=comp157834_c0_seq1.mrna1;Target=comp157834_c0_seq1 436 789 -
Chr2	stalkie_big_nohaplotig	CDS	139353676	139353762	.	-	0	Parent=comp157834_c0_seq1.mrna1
Chr2	gffcl	locus	139357200	139357328	.	+	.	ID=RLOC_00022092;geneIDs=FBgn0024273.1.path1;transcripts=FBgn0024273.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139357200	139357328	.	+	.	ID=FBgn0024273.1.mrna1;geneID=FBgn0024273.1.path1;Name=FBgn0024273.1;Dir=indeterminatecoverage=8.0;identity=100.0;matches=129;mismatches=0;indels=0;unknowns=0;Target=FBgn0024273.1 129 1 .;locus=RLOC_00022092
Chr2	stalkie_big_nohaplotig	exon	139357200	139357328	100	+	.	Parent=FBgn0024273.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139357200	139357328	.	+	0	Parent=FBgn0024273.1.mrna1
Chr2	gffcl	locus	139378394	139380874	.	+	.	ID=RLOC_00022094;geneIDs=FBgn0052436.1.path2;transcripts=FBgn0052436.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	139378394	139380874	.	+	.	ID=FBgn0052436.1.mrna2;geneID=FBgn0052436.1.path2;Name=FBgn0052436.1;Dir=indeterminatecoverage=41.4;identity=100.0;matches=2481;mismatches=0;indels=0;unknowns=0;Target=FBgn0052436.1 5988 3508 .;locus=RLOC_00022094
Chr2	stalkie_big_nohaplotig	exon	139378394	139380874	100	+	.	Parent=FBgn0052436.1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	139378394	139380874	.	+	0	Parent=FBgn0052436.1.mrna2
Chr2	gffcl	locus	139381004	139389406	.	-	.	ID=RLOC_00022095;geneIDs=FBgn0037741.1.path1;transcripts=FBgn0037741.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139381004	139389406	.	-	.	ID=FBgn0037741.1.mrna1;geneID=FBgn0037741.1.path1;Name=FBgn0037741.1;Dir=sensecoverage=100.0;identity=99.8;matches=3214;mismatches=5;indels=0;unknowns=0;locus=RLOC_00022095
Chr2	stalkie_big_nohaplotig	exon	139381004	139381289	100	-	.	Parent=FBgn0037741.1.mrna1;Target=FBgn0037741.1 2934 3219 +
Chr2	stalkie_big_nohaplotig	exon	139383685	139383756	98	-	.	Parent=FBgn0037741.1.mrna1;Target=FBgn0037741.1 2862 2933 +
Chr2	stalkie_big_nohaplotig	exon	139383998	139384677	100	-	.	Parent=FBgn0037741.1.mrna1;Target=FBgn0037741.1 2182 2861 +
Chr2	stalkie_big_nohaplotig	exon	139384755	139384897	100	-	.	Parent=FBgn0037741.1.mrna1;Target=FBgn0037741.1 2039 2181 +
Chr2	stalkie_big_nohaplotig	exon	139386471	139386623	99	-	.	Parent=FBgn0037741.1.mrna1;Target=FBgn0037741.1 1886 2038 +
Chr2	stalkie_big_nohaplotig	exon	139386682	139386784	100	-	.	Parent=FBgn0037741.1.mrna1;Target=FBgn0037741.1 1783 1885 +
Chr2	stalkie_big_nohaplotig	exon	139386836	139387924	99	-	.	Parent=FBgn0037741.1.mrna1;Target=FBgn0037741.1 694 1782 +
Chr2	stalkie_big_nohaplotig	exon	139388590	139388767	100	-	.	Parent=FBgn0037741.1.mrna1;Target=FBgn0037741.1 516 693 +
Chr2	stalkie_big_nohaplotig	exon	139388838	139389152	99	-	.	Parent=FBgn0037741.1.mrna1;Target=FBgn0037741.1 201 515 +
Chr2	stalkie_big_nohaplotig	exon	139389207	139389406	100	-	.	Parent=FBgn0037741.1.mrna1;Target=FBgn0037741.1 1 200 +
Chr2	stalkie_big_nohaplotig	CDS	139381004	139381289	.	-	1	Parent=FBgn0037741.1.mrna1;Target=FBgn0037741.1 2934 3219 +
Chr2	stalkie_big_nohaplotig	CDS	139383685	139383756	.	-	1	Parent=FBgn0037741.1.mrna1;Target=FBgn0037741.1 2862 2933 +
Chr2	stalkie_big_nohaplotig	CDS	139383998	139384677	.	-	0	Parent=FBgn0037741.1.mrna1;Target=FBgn0037741.1 2182 2861 +
Chr2	stalkie_big_nohaplotig	CDS	139384755	139384897	.	-	2	Parent=FBgn0037741.1.mrna1;Target=FBgn0037741.1 2039 2181 +
Chr2	stalkie_big_nohaplotig	CDS	139386471	139386623	.	-	2	Parent=FBgn0037741.1.mrna1;Target=FBgn0037741.1 1886 2038 +
Chr2	stalkie_big_nohaplotig	CDS	139386682	139386784	.	-	0	Parent=FBgn0037741.1.mrna1;Target=FBgn0037741.1 1783 1885 +
Chr2	stalkie_big_nohaplotig	CDS	139386836	139387924	.	-	0	Parent=FBgn0037741.1.mrna1;Target=FBgn0037741.1 694 1782 +
Chr2	stalkie_big_nohaplotig	CDS	139388590	139388767	.	-	1	Parent=FBgn0037741.1.mrna1;Target=FBgn0037741.1 516 693 +
Chr2	stalkie_big_nohaplotig	CDS	139388838	139389152	.	-	1	Parent=FBgn0037741.1.mrna1;Target=FBgn0037741.1 201 515 +
Chr2	stalkie_big_nohaplotig	CDS	139389207	139389406	.	-	0	Parent=FBgn0037741.1.mrna1;Target=FBgn0037741.1 1 200 +
Chr2	gffcl	locus	139389954	139391641	.	+	.	ID=RLOC_00022096;geneIDs=FBgn0037578.1.path1;transcripts=FBgn0037578.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139389954	139391641	.	+	.	ID=FBgn0037578.1.mrna1;geneID=FBgn0037578.1.path1;Name=FBgn0037578.1;Dir=sensecoverage=100.0;identity=99.5;matches=1621;mismatches=8;indels=0;unknowns=0;locus=RLOC_00022096
Chr2	stalkie_big_nohaplotig	exon	139389954	139391142	99	+	.	Parent=FBgn0037578.1.mrna1;Target=FBgn0037578.1 1 1189 +
Chr2	stalkie_big_nohaplotig	exon	139391202	139391641	100	+	.	Parent=FBgn0037578.1.mrna1;Target=FBgn0037578.1 1190 1629 +
Chr2	stalkie_big_nohaplotig	CDS	139389954	139391142	.	+	0	Parent=FBgn0037578.1.mrna1;Target=FBgn0037578.1 1 1189 +
Chr2	stalkie_big_nohaplotig	CDS	139391202	139391641	.	+	2	Parent=FBgn0037578.1.mrna1;Target=FBgn0037578.1 1190 1629 +
Chr2	gffcl	locus	139391718	139392443	.	-	.	ID=RLOC_00022097;geneIDs=FBgn0004908.1.path1;transcripts=FBgn0004908.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139391718	139392443	.	-	.	ID=FBgn0004908.1.mrna1;geneID=FBgn0004908.1.path1;Name=FBgn0004908.1;Dir=sensecoverage=100.0;identity=100.0;matches=576;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022097
Chr2	stalkie_big_nohaplotig	exon	139391718	139391849	100	-	.	Parent=FBgn0004908.1.mrna1;Target=FBgn0004908.1 445 576 +
Chr2	stalkie_big_nohaplotig	exon	139391911	139392265	100	-	.	Parent=FBgn0004908.1.mrna1;Target=FBgn0004908.1 90 444 +
Chr2	stalkie_big_nohaplotig	exon	139392355	139392443	100	-	.	Parent=FBgn0004908.1.mrna1;Target=FBgn0004908.1 1 89 +
Chr2	stalkie_big_nohaplotig	CDS	139391718	139391849	.	-	0	Parent=FBgn0004908.1.mrna1;Target=FBgn0004908.1 445 576 +
Chr2	stalkie_big_nohaplotig	CDS	139391911	139392265	.	-	1	Parent=FBgn0004908.1.mrna1;Target=FBgn0004908.1 90 444 +
Chr2	stalkie_big_nohaplotig	CDS	139392355	139392443	.	-	0	Parent=FBgn0004908.1.mrna1;Target=FBgn0004908.1 1 89 +
Chr2	gffcl	locus	139394493	139394960	.	+	.	ID=RLOC_00022098;geneIDs=FBgn0040529.1.path1;transcripts=FBgn0040529.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139394493	139394960	.	+	.	ID=FBgn0040529.1.mrna1;geneID=FBgn0040529.1.path1;Name=FBgn0040529.1;Dir=sensecoverage=100.0;identity=99.4;matches=331;mismatches=1;indels=1;unknowns=0;locus=RLOC_00022098
Chr2	stalkie_big_nohaplotig	exon	139394493	139394522	96	+	.	Parent=FBgn0040529.1.mrna1;Target=FBgn0040529.1 1 30 +
Chr2	stalkie_big_nohaplotig	exon	139394659	139394960	99	+	.	Parent=FBgn0040529.1.mrna1;Target=FBgn0040529.1 31 333 +
Chr2	stalkie_big_nohaplotig	CDS	139394493	139394522	.	+	0	Parent=FBgn0040529.1.mrna1;Target=FBgn0040529.1 1 30 +
Chr2	stalkie_big_nohaplotig	CDS	139394659	139394960	.	+	0	Parent=FBgn0040529.1.mrna1;Target=FBgn0040529.1 31 333 +
Chr2	gffcl	locus	139398990	139403459	.	-	.	ID=RLOC_00022099;geneIDs=FBgn0037743.1.path1;transcripts=FBgn0037743.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139398990	139403459	.	-	.	ID=FBgn0037743.1.mrna1;geneID=FBgn0037743.1.path1;Name=FBgn0037743.1;Dir=sensecoverage=100.0;identity=99.7;matches=2091;mismatches=6;indels=0;unknowns=0;locus=RLOC_00022099
Chr2	stalkie_big_nohaplotig	exon	139398990	139399869	99	-	.	Parent=FBgn0037743.1.mrna1;Target=FBgn0037743.1 1218 2097 +
Chr2	stalkie_big_nohaplotig	exon	139400016	139400261	100	-	.	Parent=FBgn0037743.1.mrna1;Target=FBgn0037743.1 972 1217 +
Chr2	stalkie_big_nohaplotig	exon	139401520	139401746	98	-	.	Parent=FBgn0037743.1.mrna1;Target=FBgn0037743.1 745 971 +
Chr2	stalkie_big_nohaplotig	exon	139401818	139401962	100	-	.	Parent=FBgn0037743.1.mrna1;Target=FBgn0037743.1 600 744 +
Chr2	stalkie_big_nohaplotig	exon	139402024	139402177	99	-	.	Parent=FBgn0037743.1.mrna1;Target=FBgn0037743.1 446 599 +
Chr2	stalkie_big_nohaplotig	exon	139402248	139402421	100	-	.	Parent=FBgn0037743.1.mrna1;Target=FBgn0037743.1 272 445 +
Chr2	stalkie_big_nohaplotig	exon	139402533	139402665	100	-	.	Parent=FBgn0037743.1.mrna1;Target=FBgn0037743.1 139 271 +
Chr2	stalkie_big_nohaplotig	exon	139403322	139403459	100	-	.	Parent=FBgn0037743.1.mrna1;Target=FBgn0037743.1 1 138 +
Chr2	stalkie_big_nohaplotig	CDS	139398990	139399869	.	-	1	Parent=FBgn0037743.1.mrna1;Target=FBgn0037743.1 1218 2097 +
Chr2	stalkie_big_nohaplotig	CDS	139400016	139400261	.	-	1	Parent=FBgn0037743.1.mrna1;Target=FBgn0037743.1 972 1217 +
Chr2	stalkie_big_nohaplotig	CDS	139401520	139401746	.	-	0	Parent=FBgn0037743.1.mrna1;Target=FBgn0037743.1 745 971 +
Chr2	stalkie_big_nohaplotig	CDS	139401818	139401962	.	-	1	Parent=FBgn0037743.1.mrna1;Target=FBgn0037743.1 600 744 +
Chr2	stalkie_big_nohaplotig	CDS	139402024	139402177	.	-	2	Parent=FBgn0037743.1.mrna1;Target=FBgn0037743.1 446 599 +
Chr2	stalkie_big_nohaplotig	CDS	139402248	139402421	.	-	2	Parent=FBgn0037743.1.mrna1;Target=FBgn0037743.1 272 445 +
Chr2	stalkie_big_nohaplotig	CDS	139402533	139402665	.	-	0	Parent=FBgn0037743.1.mrna1;Target=FBgn0037743.1 139 271 +
Chr2	stalkie_big_nohaplotig	CDS	139403322	139403459	.	-	0	Parent=FBgn0037743.1.mrna1;Target=FBgn0037743.1 1 138 +
Chr2	gffcl	locus	139476740	139477752	.	+	.	ID=RLOC_00022100;geneIDs=FBgn0003129.1.path1;transcripts=FBgn0003129.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139476740	139477752	.	+	.	ID=FBgn0003129.1.mrna1;geneID=FBgn0003129.1.path1;Name=FBgn0003129.1;Dir=indeterminatecoverage=95.7;identity=99.8;matches=1011;mismatches=2;indels=0;unknowns=0;Target=FBgn0003129.1 1059 47 .;CDS_Target=FBgn0003129.1 1059 49 .;locus=RLOC_00022100
Chr2	stalkie_big_nohaplotig	exon	139476740	139477752	99	+	.	Parent=FBgn0003129.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139476742	139477752	.	+	0	Parent=FBgn0003129.1.mrna1
Chr2	gffcl	locus	139479764	139480031	.	-	.	ID=RLOC_00022101;geneIDs=comp156121_c0_seq1.path1;transcripts=comp156121_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139479764	139480031	.	-	.	ID=comp156121_c0_seq1.mrna1;geneID=comp156121_c0_seq1.path1;Name=comp156121_c0_seq1;Dir=indeterminatecoverage=99.7;identity=76.8;matches=248;mismatches=19;indels=56;unknowns=0;Target=comp156121_c0_seq1 322 1 .;CDS_Target=comp156121_c0_seq1 74 3 .;locus=RLOC_00022101
Chr2	stalkie_big_nohaplotig	exon	139479764	139480031	76	-	.	Parent=comp156121_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139479957	139480029	.	-	0	Parent=comp156121_c0_seq1.mrna1
Chr2	gffcl	locus	139480753	139483787	.	-	.	ID=RLOC_00022102;geneIDs=FBgn0062412.4.path1;transcripts=FBgn0062412.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139480753	139483787	.	-	.	ID=FBgn0062412.4.mrna1;geneID=FBgn0062412.4.path1;Name=FBgn0062412.4;Dir=sensecoverage=100.0;identity=98.9;matches=537;mismatches=6;indels=0;unknowns=0;locus=RLOC_00022102
Chr2	stalkie_big_nohaplotig	exon	139480753	139481190	98	-	.	Parent=FBgn0062412.4.mrna1;Target=FBgn0062412.4 106 543 +
Chr2	stalkie_big_nohaplotig	exon	139481278	139481353	100	-	.	Parent=FBgn0062412.4.mrna1;Target=FBgn0062412.4 30 105 +
Chr2	stalkie_big_nohaplotig	exon	139483759	139483787	100	-	.	Parent=FBgn0062412.4.mrna1;Target=FBgn0062412.4 1 29 +
Chr2	stalkie_big_nohaplotig	CDS	139480753	139481190	.	-	0	Parent=FBgn0062412.4.mrna1;Target=FBgn0062412.4 106 543 +
Chr2	stalkie_big_nohaplotig	CDS	139481278	139481353	.	-	1	Parent=FBgn0062412.4.mrna1;Target=FBgn0062412.4 30 105 +
Chr2	stalkie_big_nohaplotig	CDS	139483759	139483787	.	-	0	Parent=FBgn0062412.4.mrna1;Target=FBgn0062412.4 1 29 +
Chr2	gffcl	locus	139487338	139492101	.	.	.	ID=RLOC_00022103;geneIDs=FBgn0062412.1.path1,FBgn0062412.2.path1,comp157668_c0_seq1.path1;transcripts=FBgn0062412.1.mrna1,comp157668_c0_seq1.mrna1,FBgn0062412.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139487338	139492101	.	-	.	ID=FBgn0062412.1.mrna1;geneID=FBgn0062412.1.path1;Name=FBgn0062412.1;Dir=sensecoverage=100.0;identity=100.0;matches=519;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022103
Chr2	stalkie_big_nohaplotig	exon	139487338	139487766	100	-	.	Parent=FBgn0062412.1.mrna1;Target=FBgn0062412.1 91 519 +
Chr2	stalkie_big_nohaplotig	exon	139492012	139492101	100	-	.	Parent=FBgn0062412.1.mrna1;Target=FBgn0062412.1 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	139487338	139487766	.	-	0	Parent=FBgn0062412.1.mrna1;Target=FBgn0062412.1 91 519 +
Chr2	stalkie_big_nohaplotig	CDS	139492012	139492101	.	-	0	Parent=FBgn0062412.1.mrna1;Target=FBgn0062412.1 1 90 +
Chr2	stalkie_big_nohaplotig	mRNA	139487744	139488381	.	+	.	ID=comp157668_c0_seq1.mrna1;geneID=comp157668_c0_seq1.path1;Name=comp157668_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=633;mismatches=5;indels=1;unknowns=0;Target=comp157668_c0_seq1 639 1 .;CDS_Target=comp157668_c0_seq1 429 283 .;locus=RLOC_00022103
Chr2	stalkie_big_nohaplotig	exon	139487744	139488381	99	+	.	Parent=comp157668_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139488026	139488172	.	+	0	Parent=comp157668_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139489229	139492101	.	-	.	ID=FBgn0062412.2.mrna1;geneID=FBgn0062412.2.path1;Name=FBgn0062412.2;Dir=sensecoverage=100.0;identity=99.4;matches=516;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022103
Chr2	stalkie_big_nohaplotig	exon	139489229	139489657	99	-	.	Parent=FBgn0062412.2.mrna1;Target=FBgn0062412.2 91 519 +
Chr2	stalkie_big_nohaplotig	exon	139492012	139492101	100	-	.	Parent=FBgn0062412.2.mrna1;Target=FBgn0062412.2 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	139489229	139489657	.	-	0	Parent=FBgn0062412.2.mrna1;Target=FBgn0062412.2 91 519 +
Chr2	stalkie_big_nohaplotig	CDS	139492012	139492101	.	-	0	Parent=FBgn0062412.2.mrna1;Target=FBgn0062412.2 1 90 +
Chr2	gffcl	locus	139496153	139497500	.	+	.	ID=RLOC_00022104;geneIDs=FBgn0037574.1.path1;transcripts=FBgn0037574.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139496153	139497500	.	+	.	ID=FBgn0037574.1.mrna1;geneID=FBgn0037574.1.path1;Name=FBgn0037574.1;Dir=sensecoverage=100.0;identity=99.4;matches=1217;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022104
Chr2	stalkie_big_nohaplotig	exon	139496153	139496456	99	+	.	Parent=FBgn0037574.1.mrna1;Target=FBgn0037574.1 1 304 +
Chr2	stalkie_big_nohaplotig	exon	139496523	139497220	99	+	.	Parent=FBgn0037574.1.mrna1;Target=FBgn0037574.1 305 1002 +
Chr2	stalkie_big_nohaplotig	exon	139497279	139497500	99	+	.	Parent=FBgn0037574.1.mrna1;Target=FBgn0037574.1 1003 1224 +
Chr2	stalkie_big_nohaplotig	CDS	139496153	139496456	.	+	0	Parent=FBgn0037574.1.mrna1;Target=FBgn0037574.1 1 304 +
Chr2	stalkie_big_nohaplotig	CDS	139496523	139497220	.	+	2	Parent=FBgn0037574.1.mrna1;Target=FBgn0037574.1 305 1002 +
Chr2	stalkie_big_nohaplotig	CDS	139497279	139497500	.	+	0	Parent=FBgn0037574.1.mrna1;Target=FBgn0037574.1 1003 1224 +
Chr2	gffcl	locus	139497747	139499140	.	-	.	ID=RLOC_00022105;geneIDs=FBgn0037573.1.path1;transcripts=FBgn0037573.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139497747	139499140	.	-	.	ID=FBgn0037573.1.mrna1;geneID=FBgn0037573.1.path1;Name=FBgn0037573.1;Dir=sensecoverage=100.0;identity=99.6;matches=1207;mismatches=5;indels=0;unknowns=0;locus=RLOC_00022105
Chr2	stalkie_big_nohaplotig	exon	139497747	139498251	99	-	.	Parent=FBgn0037573.1.mrna1;Target=FBgn0037573.1 708 1212 +
Chr2	stalkie_big_nohaplotig	exon	139498312	139498503	99	-	.	Parent=FBgn0037573.1.mrna1;Target=FBgn0037573.1 516 707 +
Chr2	stalkie_big_nohaplotig	exon	139498573	139498939	99	-	.	Parent=FBgn0037573.1.mrna1;Target=FBgn0037573.1 149 515 +
Chr2	stalkie_big_nohaplotig	exon	139498993	139499140	100	-	.	Parent=FBgn0037573.1.mrna1;Target=FBgn0037573.1 1 148 +
Chr2	stalkie_big_nohaplotig	CDS	139497747	139498251	.	-	1	Parent=FBgn0037573.1.mrna1;Target=FBgn0037573.1 708 1212 +
Chr2	stalkie_big_nohaplotig	CDS	139498312	139498503	.	-	1	Parent=FBgn0037573.1.mrna1;Target=FBgn0037573.1 516 707 +
Chr2	stalkie_big_nohaplotig	CDS	139498573	139498939	.	-	2	Parent=FBgn0037573.1.mrna1;Target=FBgn0037573.1 149 515 +
Chr2	stalkie_big_nohaplotig	CDS	139498993	139499140	.	-	0	Parent=FBgn0037573.1.mrna1;Target=FBgn0037573.1 1 148 +
Chr2	gffcl	locus	139503392	139506775	.	-	.	ID=RLOC_00022106;geneIDs=FBgn0038251.1.path1;transcripts=FBgn0038251.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139503392	139506775	.	-	.	ID=FBgn0038251.1.mrna1;geneID=FBgn0038251.1.path1;Name=FBgn0038251.1;Dir=sensecoverage=100.0;identity=99.7;matches=1340;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022106
Chr2	stalkie_big_nohaplotig	exon	139503392	139503915	99	-	.	Parent=FBgn0038251.1.mrna1;Target=FBgn0038251.1 821 1344 +
Chr2	stalkie_big_nohaplotig	exon	139504015	139504740	99	-	.	Parent=FBgn0038251.1.mrna1;Target=FBgn0038251.1 95 820 +
Chr2	stalkie_big_nohaplotig	exon	139506682	139506775	100	-	.	Parent=FBgn0038251.1.mrna1;Target=FBgn0038251.1 1 94 +
Chr2	stalkie_big_nohaplotig	CDS	139503392	139503915	.	-	2	Parent=FBgn0038251.1.mrna1;Target=FBgn0038251.1 821 1344 +
Chr2	stalkie_big_nohaplotig	CDS	139504015	139504740	.	-	2	Parent=FBgn0038251.1.mrna1;Target=FBgn0038251.1 95 820 +
Chr2	stalkie_big_nohaplotig	CDS	139506682	139506775	.	-	0	Parent=FBgn0038251.1.mrna1;Target=FBgn0038251.1 1 94 +
Chr2	gffcl	locus	139510454	139513242	.	+	.	ID=RLOC_00022107;geneIDs=FBgn0039602.1.path1;transcripts=FBgn0039602.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139510454	139513242	.	+	.	ID=FBgn0039602.1.mrna1;geneID=FBgn0039602.1.path1;Name=FBgn0039602.1;Dir=sensecoverage=99.9;identity=99.8;matches=2425;mismatches=6;indels=0;unknowns=0;locus=RLOC_00022107
Chr2	stalkie_big_nohaplotig	exon	139510454	139510645	99	+	.	Parent=FBgn0039602.1.mrna1;Target=FBgn0039602.1 1 192 +
Chr2	stalkie_big_nohaplotig	exon	139510697	139510843	100	+	.	Parent=FBgn0039602.1.mrna1;Target=FBgn0039602.1 193 339 +
Chr2	stalkie_big_nohaplotig	exon	139510895	139511175	100	+	.	Parent=FBgn0039602.1.mrna1;Target=FBgn0039602.1 340 620 +
Chr2	stalkie_big_nohaplotig	exon	139511243	139511518	100	+	.	Parent=FBgn0039602.1.mrna1;Target=FBgn0039602.1 621 896 +
Chr2	stalkie_big_nohaplotig	exon	139511585	139512578	99	+	.	Parent=FBgn0039602.1.mrna1;Target=FBgn0039602.1 897 1890 +
Chr2	stalkie_big_nohaplotig	exon	139512702	139513242	99	+	.	Parent=FBgn0039602.1.mrna1;Target=FBgn0039602.1 1891 2431 +
Chr2	stalkie_big_nohaplotig	CDS	139510454	139510645	.	+	0	Parent=FBgn0039602.1.mrna1;Target=FBgn0039602.1 1 192 +
Chr2	stalkie_big_nohaplotig	CDS	139510697	139510843	.	+	0	Parent=FBgn0039602.1.mrna1;Target=FBgn0039602.1 193 339 +
Chr2	stalkie_big_nohaplotig	CDS	139510895	139511175	.	+	0	Parent=FBgn0039602.1.mrna1;Target=FBgn0039602.1 340 620 +
Chr2	stalkie_big_nohaplotig	CDS	139511243	139511518	.	+	1	Parent=FBgn0039602.1.mrna1;Target=FBgn0039602.1 621 896 +
Chr2	stalkie_big_nohaplotig	CDS	139511585	139512578	.	+	1	Parent=FBgn0039602.1.mrna1;Target=FBgn0039602.1 897 1890 +
Chr2	stalkie_big_nohaplotig	CDS	139512702	139513241	.	+	0	Parent=FBgn0039602.1.mrna1;Target=FBgn0039602.1 1891 2430 +
Chr2	gffcl	locus	139518114	139527564	.	-	.	ID=RLOC_00022108;geneIDs=comp844864_c0_seq1.path1;transcripts=comp844864_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139518114	139527564	.	-	.	ID=comp844864_c0_seq1.mrna1;geneID=comp844864_c0_seq1.path1;Name=comp844864_c0_seq1;Dir=indeterminatecoverage=69.8;identity=91.1;matches=164;mismatches=12;indels=4;unknowns=0;Target=comp844864_c0_seq1 207 134 .;locus=RLOC_00022108
Chr2	stalkie_big_nohaplotig	exon	139518114	139518263	93	-	.	Parent=comp844864_c0_seq1.mrna1;Target=comp844864_c0_seq1 207 59 .
Chr2	stalkie_big_nohaplotig	exon	139525053	139525062	100	-	.	Parent=comp844864_c0_seq1.mrna1;Target=comp844864_c0_seq1 58 49 .
Chr2	stalkie_big_nohaplotig	exon	139527545	139527564	70	-	.	Parent=comp844864_c0_seq1.mrna1;Target=comp844864_c0_seq1 48 32 .
Chr2	stalkie_big_nohaplotig	CDS	139518114	139518188	.	-	0	Parent=comp844864_c0_seq1.mrna1
Chr2	gffcl	locus	139522181	139524747	.	-	.	ID=RLOC_00022109;geneIDs=FBgn0024273.1.path2;transcripts=FBgn0024273.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	139522181	139524747	.	-	.	ID=FBgn0024273.1.mrna2;geneID=FBgn0024273.1.path2;Name=FBgn0024273.1;Dir=sensecoverage=92.0;identity=99.8;matches=1485;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022109
Chr2	stalkie_big_nohaplotig	exon	139522181	139522432	99	-	.	Parent=FBgn0024273.1.mrna2;Target=FBgn0024273.1 1366 1617 +
Chr2	stalkie_big_nohaplotig	exon	139522503	139522694	100	-	.	Parent=FBgn0024273.1.mrna2;Target=FBgn0024273.1 1174 1365 +
Chr2	stalkie_big_nohaplotig	exon	139522986	139523174	100	-	.	Parent=FBgn0024273.1.mrna2;Target=FBgn0024273.1 985 1173 +
Chr2	stalkie_big_nohaplotig	exon	139523238	139523764	99	-	.	Parent=FBgn0024273.1.mrna2;Target=FBgn0024273.1 458 984 +
Chr2	stalkie_big_nohaplotig	exon	139523824	139523923	100	-	.	Parent=FBgn0024273.1.mrna2;Target=FBgn0024273.1 358 457 +
Chr2	stalkie_big_nohaplotig	exon	139524520	139524747	100	-	.	Parent=FBgn0024273.1.mrna2;Target=FBgn0024273.1 130 357 +
Chr2	stalkie_big_nohaplotig	CDS	139522181	139522432	.	-	0	Parent=FBgn0024273.1.mrna2;Target=FBgn0024273.1 1366 1617 +
Chr2	stalkie_big_nohaplotig	CDS	139522503	139522694	.	-	0	Parent=FBgn0024273.1.mrna2;Target=FBgn0024273.1 1174 1365 +
Chr2	stalkie_big_nohaplotig	CDS	139522986	139523174	.	-	0	Parent=FBgn0024273.1.mrna2;Target=FBgn0024273.1 985 1173 +
Chr2	stalkie_big_nohaplotig	CDS	139523238	139523764	.	-	2	Parent=FBgn0024273.1.mrna2;Target=FBgn0024273.1 458 984 +
Chr2	stalkie_big_nohaplotig	CDS	139523824	139523923	.	-	0	Parent=FBgn0024273.1.mrna2;Target=FBgn0024273.1 358 457 +
Chr2	stalkie_big_nohaplotig	CDS	139524520	139524747	.	-	0	Parent=FBgn0024273.1.mrna2;Target=FBgn0024273.1 130 357 +
Chr2	gffcl	locus	139537320	139538198	.	+	.	ID=RLOC_00022111;geneIDs=FBgn0038319.1.path1;transcripts=FBgn0038319.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139537320	139538198	.	+	.	ID=FBgn0038319.1.mrna1;geneID=FBgn0038319.1.path1;Name=FBgn0038319.1;Dir=sensecoverage=100.0;identity=99.1;matches=761;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022111
Chr2	stalkie_big_nohaplotig	exon	139537320	139537397	97	+	.	Parent=FBgn0038319.1.mrna1;Target=FBgn0038319.1 1 78 +
Chr2	stalkie_big_nohaplotig	exon	139537454	139537780	99	+	.	Parent=FBgn0038319.1.mrna1;Target=FBgn0038319.1 79 405 +
Chr2	stalkie_big_nohaplotig	exon	139537836	139538198	99	+	.	Parent=FBgn0038319.1.mrna1;Target=FBgn0038319.1 406 768 +
Chr2	stalkie_big_nohaplotig	CDS	139537320	139537397	.	+	0	Parent=FBgn0038319.1.mrna1;Target=FBgn0038319.1 1 78 +
Chr2	stalkie_big_nohaplotig	CDS	139537454	139537780	.	+	0	Parent=FBgn0038319.1.mrna1;Target=FBgn0038319.1 79 405 +
Chr2	stalkie_big_nohaplotig	CDS	139537836	139538198	.	+	0	Parent=FBgn0038319.1.mrna1;Target=FBgn0038319.1 406 768 +
Chr2	gffcl	locus	139539977	139541767	.	-	.	ID=RLOC_00022112;geneIDs=FBgn0013269.1.path1;transcripts=FBgn0013269.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139539977	139541767	.	-	.	ID=FBgn0013269.1.mrna1;geneID=FBgn0013269.1.path1;Name=FBgn0013269.1;Dir=sensecoverage=100.0;identity=99.3;matches=1078;mismatches=2;indels=6;unknowns=0;locus=RLOC_00022112
Chr2	stalkie_big_nohaplotig	exon	139539977	139540750	98	-	.	Parent=FBgn0013269.1.mrna1;Target=FBgn0013269.1 313 1080 +
Chr2	stalkie_big_nohaplotig	exon	139540820	139540857	100	-	.	Parent=FBgn0013269.1.mrna1;Target=FBgn0013269.1 275 312 +
Chr2	stalkie_big_nohaplotig	exon	139540918	139541145	100	-	.	Parent=FBgn0013269.1.mrna1;Target=FBgn0013269.1 47 274 +
Chr2	stalkie_big_nohaplotig	exon	139541722	139541767	100	-	.	Parent=FBgn0013269.1.mrna1;Target=FBgn0013269.1 1 46 +
Chr2	stalkie_big_nohaplotig	CDS	139539977	139540750	.	-	0	Parent=FBgn0013269.1.mrna1;Target=FBgn0013269.1 313 1080 +
Chr2	stalkie_big_nohaplotig	CDS	139540820	139540857	.	-	2	Parent=FBgn0013269.1.mrna1;Target=FBgn0013269.1 275 312 +
Chr2	stalkie_big_nohaplotig	CDS	139540918	139541145	.	-	2	Parent=FBgn0013269.1.mrna1;Target=FBgn0013269.1 47 274 +
Chr2	stalkie_big_nohaplotig	CDS	139541722	139541767	.	-	0	Parent=FBgn0013269.1.mrna1;Target=FBgn0013269.1 1 46 +
Chr2	gffcl	locus	139544374	139551620	.	+	.	ID=RLOC_00022113;geneIDs=FBgn0261086.1.path1;transcripts=FBgn0261086.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139544374	139551620	.	+	.	ID=FBgn0261086.1.mrna1;geneID=FBgn0261086.1.path1;Name=FBgn0261086.1;Dir=sensecoverage=100.0;identity=99.8;matches=1722;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022113
Chr2	stalkie_big_nohaplotig	exon	139544374	139544419	100	+	.	Parent=FBgn0261086.1.mrna1;Target=FBgn0261086.1 1 46 +
Chr2	stalkie_big_nohaplotig	exon	139549050	139549211	100	+	.	Parent=FBgn0261086.1.mrna1;Target=FBgn0261086.1 47 208 +
Chr2	stalkie_big_nohaplotig	exon	139549280	139549621	99	+	.	Parent=FBgn0261086.1.mrna1;Target=FBgn0261086.1 209 550 +
Chr2	stalkie_big_nohaplotig	exon	139549770	139549978	100	+	.	Parent=FBgn0261086.1.mrna1;Target=FBgn0261086.1 551 759 +
Chr2	stalkie_big_nohaplotig	exon	139550367	139550561	100	+	.	Parent=FBgn0261086.1.mrna1;Target=FBgn0261086.1 760 954 +
Chr2	stalkie_big_nohaplotig	exon	139550635	139550901	99	+	.	Parent=FBgn0261086.1.mrna1;Target=FBgn0261086.1 955 1221 +
Chr2	stalkie_big_nohaplotig	exon	139550962	139551267	100	+	.	Parent=FBgn0261086.1.mrna1;Target=FBgn0261086.1 1222 1527 +
Chr2	stalkie_big_nohaplotig	exon	139551423	139551620	100	+	.	Parent=FBgn0261086.1.mrna1;Target=FBgn0261086.1 1528 1725 +
Chr2	stalkie_big_nohaplotig	CDS	139544374	139544419	.	+	0	Parent=FBgn0261086.1.mrna1;Target=FBgn0261086.1 1 46 +
Chr2	stalkie_big_nohaplotig	CDS	139549050	139549211	.	+	2	Parent=FBgn0261086.1.mrna1;Target=FBgn0261086.1 47 208 +
Chr2	stalkie_big_nohaplotig	CDS	139549280	139549621	.	+	2	Parent=FBgn0261086.1.mrna1;Target=FBgn0261086.1 209 550 +
Chr2	stalkie_big_nohaplotig	CDS	139549770	139549978	.	+	2	Parent=FBgn0261086.1.mrna1;Target=FBgn0261086.1 551 759 +
Chr2	stalkie_big_nohaplotig	CDS	139550367	139550561	.	+	0	Parent=FBgn0261086.1.mrna1;Target=FBgn0261086.1 760 954 +
Chr2	stalkie_big_nohaplotig	CDS	139550635	139550901	.	+	0	Parent=FBgn0261086.1.mrna1;Target=FBgn0261086.1 955 1221 +
Chr2	stalkie_big_nohaplotig	CDS	139550962	139551267	.	+	0	Parent=FBgn0261086.1.mrna1;Target=FBgn0261086.1 1222 1527 +
Chr2	stalkie_big_nohaplotig	CDS	139551423	139551620	.	+	0	Parent=FBgn0261086.1.mrna1;Target=FBgn0261086.1 1528 1725 +
Chr2	gffcl	locus	139552277	139552926	.	-	.	ID=RLOC_00022114;geneIDs=comp155103_c0_seq1.path1;transcripts=comp155103_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139552277	139552926	.	-	.	ID=comp155103_c0_seq1.mrna1;geneID=comp155103_c0_seq1.path1;Name=comp155103_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=639;mismatches=9;indels=2;unknowns=0;Target=comp155103_c0_seq1 648 1 .;CDS_Target=comp155103_c0_seq1 357 211 .;locus=RLOC_00022114
Chr2	stalkie_big_nohaplotig	exon	139552277	139552926	98	-	.	Parent=comp155103_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139552570	139552716	.	-	0	Parent=comp155103_c0_seq1.mrna1
Chr2	gffcl	locus	139554154	139572617	.	+	.	ID=RLOC_00022115;geneIDs=comp155880_c0_seq1.path1;transcripts=comp155880_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139554154	139572617	.	+	.	ID=comp155880_c0_seq1.mrna1;geneID=comp155880_c0_seq1.path1;Name=comp155880_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=803;mismatches=3;indels=0;unknowns=0;Target=comp155880_c0_seq1 103 2 .;locus=RLOC_00022115
Chr2	stalkie_big_nohaplotig	exon	139554154	139554528	100	+	.	Parent=comp155880_c0_seq1.mrna1;Target=comp155880_c0_seq1 375 1 .
Chr2	stalkie_big_nohaplotig	exon	139554840	139554975	100	+	.	Parent=comp155880_c0_seq1.mrna1;Target=comp155880_c0_seq1 511 376 .
Chr2	stalkie_big_nohaplotig	exon	139572323	139572617	98	+	.	Parent=comp155880_c0_seq1.mrna1;Target=comp155880_c0_seq1 806 512 .
Chr2	stalkie_big_nohaplotig	CDS	139554155	139554256	.	+	0	Parent=comp155880_c0_seq1.mrna1
Chr2	gffcl	locus	139555852	139556144	.	-	.	ID=RLOC_00022116;geneIDs=comp145551_c0_seq1.path1;transcripts=comp145551_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139555852	139556144	.	-	.	ID=comp145551_c0_seq1.mrna1;geneID=comp145551_c0_seq1.path1;Name=comp145551_c0_seq1;Dir=indeterminatecoverage=94.8;identity=99.3;matches=291;mismatches=2;indels=0;unknowns=0;Target=comp145551_c0_seq1 293 1 .;CDS_Target=comp145551_c0_seq1 175 38 .;locus=RLOC_00022116
Chr2	stalkie_big_nohaplotig	exon	139555852	139556144	99	-	.	Parent=comp145551_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139555970	139556107	.	-	0	Parent=comp145551_c0_seq1.mrna1
Chr2	gffcl	locus	139557214	139575177	.	+	.	ID=RLOC_00022117;geneIDs=comp159644_c0_seq1.path1;transcripts=comp159644_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139557214	139575177	.	+	.	ID=comp159644_c0_seq1.mrna1;geneID=comp159644_c0_seq1.path1;Name=comp159644_c0_seq1;Dir=indeterminatecoverage=98.5;identity=86.1;matches=543;mismatches=29;indels=59;unknowns=0;locus=RLOC_00022117
Chr2	stalkie_big_nohaplotig	exon	139557214	139557482	95	+	.	Parent=comp159644_c0_seq1.mrna1;Target=comp159644_c0_seq1 283 12 .
Chr2	stalkie_big_nohaplotig	exon	139562604	139562649	64	+	.	Parent=comp159644_c0_seq1.mrna1;Target=comp159644_c0_seq1 350 302 .
Chr2	stalkie_big_nohaplotig	exon	139570744	139570751	100	+	.	Parent=comp159644_c0_seq1.mrna1;Target=comp159644_c0_seq1 358 351 .
Chr2	stalkie_big_nohaplotig	exon	139570754	139570756	100	+	.	Parent=comp159644_c0_seq1.mrna1;Target=comp159644_c0_seq1 417 415 .
Chr2	stalkie_big_nohaplotig	exon	139571638	139571648	100	+	.	Parent=comp159644_c0_seq1.mrna1;Target=comp159644_c0_seq1 428 418 .
Chr2	stalkie_big_nohaplotig	exon	139574900	139575177	79	+	.	Parent=comp159644_c0_seq1.mrna1;Target=comp159644_c0_seq1 724 482 .
Chr2	stalkie_big_nohaplotig	CDS	139557415	139557482	.	+	0	Parent=comp159644_c0_seq1.mrna1;Target=comp159644_c0_seq1 283 216 .
Chr2	stalkie_big_nohaplotig	CDS	139562604	139562610	.	+	1	Parent=comp159644_c0_seq1.mrna1;Target=comp159644_c0_seq1 308 302 .
Chr2	gffcl	locus	139560550	139561037	.	-	.	ID=RLOC_00022118;geneIDs=comp114447_c0_seq1.path2;transcripts=comp114447_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	139560550	139561037	.	-	.	ID=comp114447_c0_seq1.mrna2;geneID=comp114447_c0_seq1.path2;Name=comp114447_c0_seq1;Dir=indeterminatecoverage=96.3;identity=100.0;matches=488;mismatches=0;indels=0;unknowns=0;Target=comp114447_c0_seq1 489 2 .;CDS_Target=comp114447_c0_seq1 82 2 .;locus=RLOC_00022118
Chr2	stalkie_big_nohaplotig	exon	139560550	139561037	100	-	.	Parent=comp114447_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	139560957	139561037	.	-	0	Parent=comp114447_c0_seq1.mrna2
Chr2	gffcl	locus	139562928	139566016	.	-	.	ID=RLOC_00022119;geneIDs=FBgn0037232.1.path1;transcripts=FBgn0037232.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139562928	139566016	.	-	.	ID=FBgn0037232.1.mrna1;geneID=FBgn0037232.1.path1;Name=FBgn0037232.1;Dir=sensecoverage=100.0;identity=99.6;matches=2511;mismatches=9;indels=1;unknowns=0;locus=RLOC_00022119
Chr2	stalkie_big_nohaplotig	exon	139562928	139563145	100	-	.	Parent=FBgn0037232.1.mrna1;Target=FBgn0037232.1 2303 2520 +
Chr2	stalkie_big_nohaplotig	exon	139563224	139563405	100	-	.	Parent=FBgn0037232.1.mrna1;Target=FBgn0037232.1 2121 2302 +
Chr2	stalkie_big_nohaplotig	exon	139563470	139563618	99	-	.	Parent=FBgn0037232.1.mrna1;Target=FBgn0037232.1 1972 2120 +
Chr2	stalkie_big_nohaplotig	exon	139563679	139563858	99	-	.	Parent=FBgn0037232.1.mrna1;Target=FBgn0037232.1 1792 1971 +
Chr2	stalkie_big_nohaplotig	exon	139563926	139564226	99	-	.	Parent=FBgn0037232.1.mrna1;Target=FBgn0037232.1 1491 1791 +
Chr2	stalkie_big_nohaplotig	exon	139564285	139564419	99	-	.	Parent=FBgn0037232.1.mrna1;Target=FBgn0037232.1 1356 1490 +
Chr2	stalkie_big_nohaplotig	exon	139564488	139564797	100	-	.	Parent=FBgn0037232.1.mrna1;Target=FBgn0037232.1 1046 1355 +
Chr2	stalkie_big_nohaplotig	exon	139564858	139564969	100	-	.	Parent=FBgn0037232.1.mrna1;Target=FBgn0037232.1 934 1045 +
Chr2	stalkie_big_nohaplotig	exon	139565029	139565420	99	-	.	Parent=FBgn0037232.1.mrna1;Target=FBgn0037232.1 542 933 +
Chr2	stalkie_big_nohaplotig	exon	139565475	139566016	99	-	.	Parent=FBgn0037232.1.mrna1;Target=FBgn0037232.1 1 541 +
Chr2	stalkie_big_nohaplotig	CDS	139562928	139563145	.	-	2	Parent=FBgn0037232.1.mrna1;Target=FBgn0037232.1 2303 2520 +
Chr2	stalkie_big_nohaplotig	CDS	139563224	139563405	.	-	1	Parent=FBgn0037232.1.mrna1;Target=FBgn0037232.1 2121 2302 +
Chr2	stalkie_big_nohaplotig	CDS	139563470	139563618	.	-	0	Parent=FBgn0037232.1.mrna1;Target=FBgn0037232.1 1972 2120 +
Chr2	stalkie_big_nohaplotig	CDS	139563679	139563858	.	-	0	Parent=FBgn0037232.1.mrna1;Target=FBgn0037232.1 1792 1971 +
Chr2	stalkie_big_nohaplotig	CDS	139563926	139564226	.	-	1	Parent=FBgn0037232.1.mrna1;Target=FBgn0037232.1 1491 1791 +
Chr2	stalkie_big_nohaplotig	CDS	139564285	139564419	.	-	1	Parent=FBgn0037232.1.mrna1;Target=FBgn0037232.1 1356 1490 +
Chr2	stalkie_big_nohaplotig	CDS	139564488	139564797	.	-	2	Parent=FBgn0037232.1.mrna1;Target=FBgn0037232.1 1046 1355 +
Chr2	stalkie_big_nohaplotig	CDS	139564858	139564969	.	-	0	Parent=FBgn0037232.1.mrna1;Target=FBgn0037232.1 934 1045 +
Chr2	stalkie_big_nohaplotig	CDS	139565029	139565420	.	-	2	Parent=FBgn0037232.1.mrna1;Target=FBgn0037232.1 542 933 +
Chr2	stalkie_big_nohaplotig	CDS	139565475	139565904	.	-	0	Parent=FBgn0037232.1.mrna1;Target=FBgn0037232.1 112 541 +
Chr2	gffcl	locus	139566307	139567218	.	+	.	ID=RLOC_00022120;geneIDs=FBgn0037231.1.path1;transcripts=FBgn0037231.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139566307	139567218	.	+	.	ID=FBgn0037231.1.mrna1;geneID=FBgn0037231.1.path1;Name=FBgn0037231.1;Dir=sensecoverage=100.0;identity=99.6;matches=701;mismatches=1;indels=2;unknowns=0;Target=FBgn0037231.1 3 23 +;locus=RLOC_00022120
Chr2	stalkie_big_nohaplotig	exon	139566307	139566386	96	+	.	Parent=FBgn0037231.1.mrna1;Target=FBgn0037231.1 1 78 +
Chr2	stalkie_big_nohaplotig	exon	139566536	139566776	100	+	.	Parent=FBgn0037231.1.mrna1;Target=FBgn0037231.1 79 319 +
Chr2	stalkie_big_nohaplotig	exon	139566836	139567218	100	+	.	Parent=FBgn0037231.1.mrna1;Target=FBgn0037231.1 320 702 +
Chr2	stalkie_big_nohaplotig	CDS	139566309	139566331	.	+	0	Parent=FBgn0037231.1.mrna1
Chr2	gffcl	locus	139573788	139574595	.	+	.	ID=RLOC_00022121;geneIDs=comp159356_c0_seq1.path1;transcripts=comp159356_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139573788	139574595	.	+	.	ID=comp159356_c0_seq1.mrna1;geneID=comp159356_c0_seq1.path1;Name=comp159356_c0_seq1;Dir=indeterminatecoverage=96.4;identity=98.0;matches=794;mismatches=14;indels=2;unknowns=0;Target=comp159356_c0_seq1 810 1 .;CDS_Target=comp159356_c0_seq1 602 495 .;locus=RLOC_00022121
Chr2	stalkie_big_nohaplotig	exon	139573788	139574595	98	+	.	Parent=comp159356_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139574280	139574387	.	+	0	Parent=comp159356_c0_seq1.mrna1
Chr2	gffcl	locus	139576745	139577215	.	+	.	ID=RLOC_00022122;geneIDs=comp156596_c0_seq1.path1;transcripts=comp156596_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139576745	139577215	.	+	.	ID=comp156596_c0_seq1.mrna1;geneID=comp156596_c0_seq1.path1;Name=comp156596_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=460;mismatches=11;indels=1;unknowns=0;Target=comp156596_c0_seq1 472 1 .;CDS_Target=comp156596_c0_seq1 15 1 .;locus=RLOC_00022122
Chr2	stalkie_big_nohaplotig	exon	139576745	139577215	97	+	.	Parent=comp156596_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139576745	139576758	.	+	0	Parent=comp156596_c0_seq1.mrna1
Chr2	gffcl	locus	139578532	139579020	.	-	.	ID=RLOC_00022123;geneIDs=comp114447_c0_seq1.path1;transcripts=comp114447_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139578532	139579020	.	-	.	ID=comp114447_c0_seq1.mrna1;geneID=comp114447_c0_seq1.path1;Name=comp114447_c0_seq1;Dir=indeterminatecoverage=96.4;identity=100.0;matches=489;mismatches=0;indels=0;unknowns=0;Target=comp114447_c0_seq1 489 1 .;CDS_Target=comp114447_c0_seq1 82 2 .;locus=RLOC_00022123
Chr2	stalkie_big_nohaplotig	exon	139578532	139579020	100	-	.	Parent=comp114447_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139578939	139579019	.	-	0	Parent=comp114447_c0_seq1.mrna1
Chr2	gffcl	locus	139579374	139671519	.	+	.	ID=RLOC_00022124;geneIDs=FBgn0027338.7.path1,comp143825_c0_seq1.path1;transcripts=comp143825_c0_seq1.mrna1,FBgn0027338.7.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139579374	139670897	.	+	.	ID=comp143825_c0_seq1.mrna1;geneID=comp143825_c0_seq1.path1;Name=comp143825_c0_seq1;Dir=indeterminatecoverage=58.5;identity=71.1;matches=339;mismatches=54;indels=84;unknowns=0;Target=comp143825_c0_seq1 569 414 .;locus=RLOC_00022124
Chr2	stalkie_big_nohaplotig	exon	139579374	139579393	40	+	.	Parent=comp143825_c0_seq1.mrna1;Target=comp143825_c0_seq1 136 95 .
Chr2	stalkie_big_nohaplotig	exon	139584083	139584087	100	+	.	Parent=comp143825_c0_seq1.mrna1;Target=comp143825_c0_seq1 141 137 .
Chr2	stalkie_big_nohaplotig	exon	139589510	139589511	100	+	.	Parent=comp143825_c0_seq1.mrna1;Target=comp143825_c0_seq1 143 142 .
Chr2	stalkie_big_nohaplotig	exon	139596239	139596244	100	+	.	Parent=comp143825_c0_seq1.mrna1;Target=comp143825_c0_seq1 149 144 .
Chr2	stalkie_big_nohaplotig	exon	139611527	139611531	100	+	.	Parent=comp143825_c0_seq1.mrna1;Target=comp143825_c0_seq1 154 150 .
Chr2	stalkie_big_nohaplotig	exon	139611670	139611673	100	+	.	Parent=comp143825_c0_seq1.mrna1;Target=comp143825_c0_seq1 158 155 .
Chr2	stalkie_big_nohaplotig	exon	139614318	139614325	87	+	.	Parent=comp143825_c0_seq1.mrna1;Target=comp143825_c0_seq1 166 159 .
Chr2	stalkie_big_nohaplotig	exon	139616844	139616855	66	+	.	Parent=comp143825_c0_seq1.mrna1;Target=comp143825_c0_seq1 178 167 .
Chr2	stalkie_big_nohaplotig	exon	139630335	139630345	90	+	.	Parent=comp143825_c0_seq1.mrna1;Target=comp143825_c0_seq1 189 179 .
Chr2	stalkie_big_nohaplotig	exon	139637343	139637356	57	+	.	Parent=comp143825_c0_seq1.mrna1;Target=comp143825_c0_seq1 203 190 .
Chr2	stalkie_big_nohaplotig	exon	139651590	139651620	50	+	.	Parent=comp143825_c0_seq1.mrna1;Target=comp143825_c0_seq1 253 204 .
Chr2	stalkie_big_nohaplotig	exon	139653404	139653415	91	+	.	Parent=comp143825_c0_seq1.mrna1;Target=comp143825_c0_seq1 265 254 .
Chr2	stalkie_big_nohaplotig	exon	139661537	139661569	42	+	.	Parent=comp143825_c0_seq1.mrna1;Target=comp143825_c0_seq1 328 266 .
Chr2	stalkie_big_nohaplotig	exon	139670668	139670897	83	+	.	Parent=comp143825_c0_seq1.mrna1;Target=comp143825_c0_seq1 571 329 .
Chr2	stalkie_big_nohaplotig	CDS	139670740	139670895	.	+	0	Parent=comp143825_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139670231	139671519	.	+	.	ID=FBgn0027338.7.mrna1;geneID=FBgn0027338.7.path1;Name=FBgn0027338.7;Dir=indeterminatecoverage=99.9;identity=98.8;matches=1274;mismatches=15;indels=0;unknowns=0;Target=FBgn0027338.7 1290 2 .;CDS_Target=FBgn0027338.7 1290 4 .;locus=RLOC_00022124
Chr2	stalkie_big_nohaplotig	exon	139670231	139671519	98	+	.	Parent=FBgn0027338.7.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139670233	139671519	.	+	0	Parent=FBgn0027338.7.mrna1
Chr2	gffcl	locus	139584287	139585198	.	+	.	ID=RLOC_00022125;geneIDs=FBgn0037231.1.path2;transcripts=FBgn0037231.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	139584287	139585198	.	+	.	ID=FBgn0037231.1.mrna2;geneID=FBgn0037231.1.path2;Name=FBgn0037231.1;Dir=sensecoverage=100.0;identity=99.6;matches=701;mismatches=1;indels=2;unknowns=0;Target=FBgn0037231.1 3 23 +;locus=RLOC_00022125
Chr2	stalkie_big_nohaplotig	exon	139584287	139584366	96	+	.	Parent=FBgn0037231.1.mrna2;Target=FBgn0037231.1 1 78 +
Chr2	stalkie_big_nohaplotig	exon	139584516	139584756	100	+	.	Parent=FBgn0037231.1.mrna2;Target=FBgn0037231.1 79 319 +
Chr2	stalkie_big_nohaplotig	exon	139584816	139585198	100	+	.	Parent=FBgn0037231.1.mrna2;Target=FBgn0037231.1 320 702 +
Chr2	stalkie_big_nohaplotig	CDS	139584289	139584311	.	+	0	Parent=FBgn0037231.1.mrna2
Chr2	gffcl	locus	139589666	139591009	.	+	.	ID=RLOC_00022126;geneIDs=FBgn0027338.5.path1;transcripts=FBgn0027338.5.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139589666	139591009	.	+	.	ID=FBgn0027338.5.mrna1;geneID=FBgn0027338.5.path1;Name=FBgn0027338.5;Dir=indeterminatecoverage=100.0;identity=98.4;matches=1323;mismatches=21;indels=0;unknowns=0;Target=FBgn0027338.5 1344 1 .;locus=RLOC_00022126
Chr2	stalkie_big_nohaplotig	exon	139589666	139591009	98	+	.	Parent=FBgn0027338.5.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139589666	139591009	.	+	0	Parent=FBgn0027338.5.mrna1
Chr2	gffcl	locus	139631837	139633138	.	+	.	ID=RLOC_00022127;geneIDs=FBgn0027338.6.path1;transcripts=FBgn0027338.6.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139631837	139633138	.	+	.	ID=FBgn0027338.6.mrna1;geneID=FBgn0027338.6.path1;Name=FBgn0027338.6;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1290;mismatches=12;indels=0;unknowns=0;Target=FBgn0027338.6 1302 1 .;locus=RLOC_00022127
Chr2	stalkie_big_nohaplotig	exon	139631837	139633138	99	+	.	Parent=FBgn0027338.6.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139631837	139633138	.	+	0	Parent=FBgn0027338.6.mrna1
Chr2	gffcl	locus	139694759	139765540	.	+	.	ID=RLOC_00022128;geneIDs=comp147522_c0_seq1.path1;transcripts=comp147522_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139694759	139765540	.	+	.	ID=comp147522_c0_seq1.mrna1;geneID=comp147522_c0_seq1.path1;Name=comp147522_c0_seq1;Dir=indeterminatecoverage=98.1;identity=100.0;matches=824;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022128
Chr2	stalkie_big_nohaplotig	exon	139694759	139694762	100	+	.	Parent=comp147522_c0_seq1.mrna1;Target=comp147522_c0_seq1 20 17 .
Chr2	stalkie_big_nohaplotig	exon	139709511	139709515	100	+	.	Parent=comp147522_c0_seq1.mrna1;Target=comp147522_c0_seq1 25 21 .
Chr2	stalkie_big_nohaplotig	exon	139710287	139710293	100	+	.	Parent=comp147522_c0_seq1.mrna1;Target=comp147522_c0_seq1 32 26 .
Chr2	stalkie_big_nohaplotig	exon	139718328	139718339	100	+	.	Parent=comp147522_c0_seq1.mrna1;Target=comp147522_c0_seq1 44 33 .
Chr2	stalkie_big_nohaplotig	exon	139721755	139721759	100	+	.	Parent=comp147522_c0_seq1.mrna1;Target=comp147522_c0_seq1 49 45 .
Chr2	stalkie_big_nohaplotig	exon	139727012	139727016	100	+	.	Parent=comp147522_c0_seq1.mrna1;Target=comp147522_c0_seq1 54 50 .
Chr2	stalkie_big_nohaplotig	exon	139764755	139765540	100	+	.	Parent=comp147522_c0_seq1.mrna1;Target=comp147522_c0_seq1 840 55 .
Chr2	stalkie_big_nohaplotig	CDS	139694761	139694762	.	+	0	Parent=comp147522_c0_seq1.mrna1;Target=comp147522_c0_seq1 20 19 .
Chr2	stalkie_big_nohaplotig	CDS	139709511	139709515	.	+	1	Parent=comp147522_c0_seq1.mrna1;Target=comp147522_c0_seq1 25 21 .
Chr2	stalkie_big_nohaplotig	CDS	139710287	139710293	.	+	2	Parent=comp147522_c0_seq1.mrna1;Target=comp147522_c0_seq1 32 26 .
Chr2	stalkie_big_nohaplotig	CDS	139718328	139718339	.	+	1	Parent=comp147522_c0_seq1.mrna1;Target=comp147522_c0_seq1 44 33 .
Chr2	stalkie_big_nohaplotig	CDS	139721755	139721759	.	+	1	Parent=comp147522_c0_seq1.mrna1;Target=comp147522_c0_seq1 49 45 .
Chr2	stalkie_big_nohaplotig	CDS	139727012	139727016	.	+	2	Parent=comp147522_c0_seq1.mrna1;Target=comp147522_c0_seq1 54 50 .
Chr2	stalkie_big_nohaplotig	CDS	139764755	139764805	.	+	0	Parent=comp147522_c0_seq1.mrna1;Target=comp147522_c0_seq1 105 55 .
Chr2	gffcl	locus	139722362	139724328	.	-	.	ID=RLOC_00022129;geneIDs=comp163142_c0_seq1.path1;transcripts=comp163142_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139722362	139724328	.	-	.	ID=comp163142_c0_seq1.mrna1;geneID=comp163142_c0_seq1.path1;Name=comp163142_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.5;matches=1944;mismatches=22;indels=8;unknowns=0;Target=comp163142_c0_seq1 1975 3 .;CDS_Target=comp163142_c0_seq1 1208 1062 .;locus=RLOC_00022129
Chr2	stalkie_big_nohaplotig	exon	139722362	139724328	98	-	.	Parent=comp163142_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139723123	139723269	.	-	0	Parent=comp163142_c0_seq1.mrna1
Chr2	gffcl	locus	139724489	139724966	.	+	.	ID=RLOC_00022130;geneIDs=comp117789_c0_seq1.path1;transcripts=comp117789_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139724489	139724966	.	+	.	ID=comp117789_c0_seq1.mrna1;geneID=comp117789_c0_seq1.path1;Name=comp117789_c0_seq1;Dir=indeterminatecoverage=98.0;identity=99.2;matches=474;mismatches=4;indels=0;unknowns=0;Target=comp117789_c0_seq1 478 1 .;CDS_Target=comp117789_c0_seq1 462 334 .;locus=RLOC_00022130
Chr2	stalkie_big_nohaplotig	exon	139724489	139724966	99	+	.	Parent=comp117789_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139724822	139724950	.	+	0	Parent=comp117789_c0_seq1.mrna1
Chr2	gffcl	locus	139728192	139728644	.	-	.	ID=RLOC_00022131;geneIDs=comp142967_c0_seq1.path1;transcripts=comp142967_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139728192	139728644	.	-	.	ID=comp142967_c0_seq1.mrna1;geneID=comp142967_c0_seq1.path1;Name=comp142967_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.6;matches=452;mismatches=0;indels=2;unknowns=0;Target=comp142967_c0_seq1 456 4 .;CDS_Target=comp142967_c0_seq1 332 285 .;locus=RLOC_00022131
Chr2	stalkie_big_nohaplotig	exon	139728192	139728644	99	-	.	Parent=comp142967_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139728316	139728364	.	-	0	Parent=comp142967_c0_seq1.mrna1
Chr2	gffcl	locus	139729887	139731108	.	+	.	ID=RLOC_00022132;geneIDs=comp163569_c0_seq1.path1;transcripts=comp163569_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139729887	139731108	.	+	.	ID=comp163569_c0_seq1.mrna1;geneID=comp163569_c0_seq1.path1;Name=comp163569_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.0;matches=1075;mismatches=22;indels=11;unknowns=0;locus=RLOC_00022132
Chr2	stalkie_big_nohaplotig	exon	139729887	139729994	95	+	.	Parent=comp163569_c0_seq1.mrna1;Target=comp163569_c0_seq1 108 1 .
Chr2	stalkie_big_nohaplotig	exon	139730115	139731108	97	+	.	Parent=comp163569_c0_seq1.mrna1;Target=comp163569_c0_seq1 1103 109 .
Chr2	stalkie_big_nohaplotig	CDS	139729888	139729994	.	+	0	Parent=comp163569_c0_seq1.mrna1;Target=comp163569_c0_seq1 108 2 .
Chr2	stalkie_big_nohaplotig	CDS	139730115	139730150	.	+	1	Parent=comp163569_c0_seq1.mrna1;Target=comp163569_c0_seq1 142 109 .
Chr2	gffcl	locus	139734923	139735571	.	-	.	ID=RLOC_00022134;geneIDs=comp152295_c0_seq1.path1;transcripts=comp152295_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139734923	139735571	.	-	.	ID=comp152295_c0_seq1.mrna1;geneID=comp152295_c0_seq1.path1;Name=comp152295_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=648;mismatches=1;indels=1;unknowns=0;Target=comp152295_c0_seq1 650 1 .;CDS_Target=comp152295_c0_seq1 148 53 .;locus=RLOC_00022134
Chr2	stalkie_big_nohaplotig	exon	139734923	139735571	99	-	.	Parent=comp152295_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139735424	139735519	.	-	0	Parent=comp152295_c0_seq1.mrna1
Chr2	gffcl	locus	139736687	141615783	.	+	.	ID=RLOC_00022135;geneIDs=comp150619_c0_seq1.path1;transcripts=comp150619_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139736687	141615783	.	+	.	ID=comp150619_c0_seq1.mrna1;geneID=comp150619_c0_seq1.path1;Name=comp150619_c0_seq1;Dir=indeterminatecoverage=74.3;identity=96.1;matches=574;mismatches=8;indels=15;unknowns=0;locus=RLOC_00022135
Chr2	stalkie_big_nohaplotig	exon	139736687	139737204	98	+	.	Parent=comp150619_c0_seq1.mrna1;Target=comp150619_c0_seq1 517 1 .
Chr2	stalkie_big_nohaplotig	exon	141596423	141596430	100	+	.	Parent=comp150619_c0_seq1.mrna1;Target=comp150619_c0_seq1 529 522 .
Chr2	stalkie_big_nohaplotig	exon	141596450	141596451	100	+	.	Parent=comp150619_c0_seq1.mrna1;Target=comp150619_c0_seq1 559 558 .
Chr2	stalkie_big_nohaplotig	exon	141598787	141598792	100	+	.	Parent=comp150619_c0_seq1.mrna1;Target=comp150619_c0_seq1 565 560 .
Chr2	stalkie_big_nohaplotig	exon	141604799	141604807	100	+	.	Parent=comp150619_c0_seq1.mrna1;Target=comp150619_c0_seq1 574 566 .
Chr2	stalkie_big_nohaplotig	exon	141612101	141612105	100	+	.	Parent=comp150619_c0_seq1.mrna1;Target=comp150619_c0_seq1 580 576 .
Chr2	stalkie_big_nohaplotig	exon	141614216	141614223	100	+	.	Parent=comp150619_c0_seq1.mrna1;Target=comp150619_c0_seq1 588 581 .
Chr2	stalkie_big_nohaplotig	exon	141614258	141614266	100	+	.	Parent=comp150619_c0_seq1.mrna1;Target=comp150619_c0_seq1 628 620 .
Chr2	stalkie_big_nohaplotig	exon	141614277	141614284	100	+	.	Parent=comp150619_c0_seq1.mrna1;Target=comp150619_c0_seq1 664 657 .
Chr2	stalkie_big_nohaplotig	exon	141614289	141614309	33	+	.	Parent=comp150619_c0_seq1.mrna1;Target=comp150619_c0_seq1 672 666 .
Chr2	stalkie_big_nohaplotig	exon	141615781	141615783	100	+	.	Parent=comp150619_c0_seq1.mrna1;Target=comp150619_c0_seq1 675 673 .
Chr2	stalkie_big_nohaplotig	CDS	139737105	139737204	.	+	0	Parent=comp150619_c0_seq1.mrna1;Target=comp150619_c0_seq1 517 418 .
Chr2	stalkie_big_nohaplotig	CDS	141596423	141596426	.	+	2	Parent=comp150619_c0_seq1.mrna1;Target=comp150619_c0_seq1 525 522 .
Chr2	gffcl	locus	139737285	139737755	.	-	.	ID=RLOC_00022136;geneIDs=comp150005_c0_seq1.path1;transcripts=comp150005_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139737285	139737755	.	-	.	ID=comp150005_c0_seq1.mrna1;geneID=comp150005_c0_seq1.path1;Name=comp150005_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=469;mismatches=2;indels=0;unknowns=0;Target=comp150005_c0_seq1 471 1 .;CDS_Target=comp150005_c0_seq1 174 112 .;locus=RLOC_00022136
Chr2	stalkie_big_nohaplotig	exon	139737285	139737755	99	-	.	Parent=comp150005_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139737582	139737644	.	-	0	Parent=comp150005_c0_seq1.mrna1
Chr2	gffcl	locus	139737919	139738509	.	-	.	ID=RLOC_00022137;geneIDs=comp150108_c0_seq1.path1;transcripts=comp150108_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139737919	139738509	.	-	.	ID=comp150108_c0_seq1.mrna1;geneID=comp150108_c0_seq1.path1;Name=comp150108_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=588;mismatches=3;indels=0;unknowns=0;Target=comp150108_c0_seq1 591 1 .;CDS_Target=comp150108_c0_seq1 221 141 .;locus=RLOC_00022137
Chr2	stalkie_big_nohaplotig	exon	139737919	139738509	99	-	.	Parent=comp150108_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139738289	139738369	.	-	0	Parent=comp150108_c0_seq1.mrna1
Chr2	gffcl	locus	139810167	139811422	.	-	.	ID=RLOC_00022138;geneIDs=comp155531_c0_seq1.path1;transcripts=comp155531_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139810167	139811422	.	-	.	ID=comp155531_c0_seq1.mrna1;geneID=comp155531_c0_seq1.path1;Name=comp155531_c0_seq1;Dir=indeterminatecoverage=98.7;identity=99.3;matches=1247;mismatches=9;indels=0;unknowns=0;Target=comp155531_c0_seq1 1256 1 .;CDS_Target=comp155531_c0_seq1 1191 943 .;locus=RLOC_00022138
Chr2	stalkie_big_nohaplotig	exon	139810167	139811422	99	-	.	Parent=comp155531_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139810232	139810480	.	-	0	Parent=comp155531_c0_seq1.mrna1
Chr2	gffcl	locus	139894245	139894601	.	-	.	ID=RLOC_00022139;geneIDs=comp146137_c0_seq1.path1;transcripts=comp146137_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139894245	139894601	.	-	.	ID=comp146137_c0_seq1.mrna1;geneID=comp146137_c0_seq1.path1;Name=comp146137_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=353;mismatches=4;indels=0;unknowns=0;Target=comp146137_c0_seq1 357 1 .;CDS_Target=comp146137_c0_seq1 196 113 .;locus=RLOC_00022139
Chr2	stalkie_big_nohaplotig	exon	139894245	139894601	98	-	.	Parent=comp146137_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139894406	139894489	.	-	0	Parent=comp146137_c0_seq1.mrna1
Chr2	gffcl	locus	139922803	139923723	.	+	.	ID=RLOC_00022140;geneIDs=comp117534_c0_seq1.path1;transcripts=comp117534_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139922803	139923723	.	+	.	ID=comp117534_c0_seq1.mrna1;geneID=comp117534_c0_seq1.path1;Name=comp117534_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=912;mismatches=9;indels=0;unknowns=0;Target=comp117534_c0_seq1 921 1 .;CDS_Target=comp117534_c0_seq1 107 3 .;locus=RLOC_00022140
Chr2	stalkie_big_nohaplotig	exon	139922803	139923723	99	+	.	Parent=comp117534_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139922805	139922909	.	+	0	Parent=comp117534_c0_seq1.mrna1
Chr2	gffcl	locus	139990767	139990839	.	+	.	ID=RLOC_00022141;geneIDs=FBgn0041605.1.path1;transcripts=FBgn0041605.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	139990767	139990839	.	+	.	ID=FBgn0041605.1.mrna1;geneID=FBgn0041605.1.path1;Name=FBgn0041605.1;Dir=indeterminatecoverage=16.3;identity=100.0;matches=73;mismatches=0;indels=0;unknowns=0;Target=FBgn0041605.1 73 1 .;locus=RLOC_00022141
Chr2	stalkie_big_nohaplotig	exon	139990767	139990839	100	+	.	Parent=FBgn0041605.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	139990767	139990839	.	+	0	Parent=FBgn0041605.1.mrna1
Chr2	gffcl	locus	140022943	140028403	.	+	.	ID=RLOC_00022145;geneIDs=FBgn0038163.2.path1;transcripts=FBgn0038163.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140022943	140028403	.	+	.	ID=FBgn0038163.2.mrna1;geneID=FBgn0038163.2.path1;Name=FBgn0038163.2;Dir=sensecoverage=100.0;identity=99.6;matches=2163;mismatches=9;indels=0;unknowns=0;locus=RLOC_00022145
Chr2	stalkie_big_nohaplotig	exon	140022943	140022972	100	+	.	Parent=FBgn0038163.2.mrna1;Target=FBgn0038163.2 1 30 +
Chr2	stalkie_big_nohaplotig	exon	140023042	140023168	100	+	.	Parent=FBgn0038163.2.mrna1;Target=FBgn0038163.2 31 157 +
Chr2	stalkie_big_nohaplotig	exon	140023817	140023960	100	+	.	Parent=FBgn0038163.2.mrna1;Target=FBgn0038163.2 158 301 +
Chr2	stalkie_big_nohaplotig	exon	140024018	140024187	99	+	.	Parent=FBgn0038163.2.mrna1;Target=FBgn0038163.2 302 471 +
Chr2	stalkie_big_nohaplotig	exon	140024251	140024457	100	+	.	Parent=FBgn0038163.2.mrna1;Target=FBgn0038163.2 472 678 +
Chr2	stalkie_big_nohaplotig	exon	140025512	140025890	99	+	.	Parent=FBgn0038163.2.mrna1;Target=FBgn0038163.2 679 1057 +
Chr2	stalkie_big_nohaplotig	exon	140025951	140026161	100	+	.	Parent=FBgn0038163.2.mrna1;Target=FBgn0038163.2 1058 1268 +
Chr2	stalkie_big_nohaplotig	exon	140026234	140026671	99	+	.	Parent=FBgn0038163.2.mrna1;Target=FBgn0038163.2 1269 1706 +
Chr2	stalkie_big_nohaplotig	exon	140026752	140027134	99	+	.	Parent=FBgn0038163.2.mrna1;Target=FBgn0038163.2 1707 2089 +
Chr2	stalkie_big_nohaplotig	exon	140028321	140028403	100	+	.	Parent=FBgn0038163.2.mrna1;Target=FBgn0038163.2 2090 2172 +
Chr2	stalkie_big_nohaplotig	CDS	140022943	140022972	.	+	0	Parent=FBgn0038163.2.mrna1;Target=FBgn0038163.2 1 30 +
Chr2	stalkie_big_nohaplotig	CDS	140023042	140023168	.	+	0	Parent=FBgn0038163.2.mrna1;Target=FBgn0038163.2 31 157 +
Chr2	stalkie_big_nohaplotig	CDS	140023817	140023960	.	+	2	Parent=FBgn0038163.2.mrna1;Target=FBgn0038163.2 158 301 +
Chr2	stalkie_big_nohaplotig	CDS	140024018	140024187	.	+	2	Parent=FBgn0038163.2.mrna1;Target=FBgn0038163.2 302 471 +
Chr2	stalkie_big_nohaplotig	CDS	140024251	140024457	.	+	0	Parent=FBgn0038163.2.mrna1;Target=FBgn0038163.2 472 678 +
Chr2	stalkie_big_nohaplotig	CDS	140025512	140025890	.	+	0	Parent=FBgn0038163.2.mrna1;Target=FBgn0038163.2 679 1057 +
Chr2	stalkie_big_nohaplotig	CDS	140025951	140026161	.	+	2	Parent=FBgn0038163.2.mrna1;Target=FBgn0038163.2 1058 1268 +
Chr2	stalkie_big_nohaplotig	CDS	140026234	140026671	.	+	1	Parent=FBgn0038163.2.mrna1;Target=FBgn0038163.2 1269 1706 +
Chr2	stalkie_big_nohaplotig	CDS	140026752	140027134	.	+	1	Parent=FBgn0038163.2.mrna1;Target=FBgn0038163.2 1707 2089 +
Chr2	stalkie_big_nohaplotig	CDS	140028321	140028403	.	+	2	Parent=FBgn0038163.2.mrna1;Target=FBgn0038163.2 2090 2172 +
Chr2	gffcl	locus	140030711	140034411	.	-	.	ID=RLOC_00022146;geneIDs=FBgn0037254.2.path1;transcripts=FBgn0037254.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140030711	140034411	.	-	.	ID=FBgn0037254.2.mrna1;geneID=FBgn0037254.2.path1;Name=FBgn0037254.2;Dir=sensecoverage=100.0;identity=99.9;matches=3189;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022146
Chr2	stalkie_big_nohaplotig	exon	140030711	140031349	99	-	.	Parent=FBgn0037254.2.mrna1;Target=FBgn0037254.2 2554 3192 +
Chr2	stalkie_big_nohaplotig	exon	140031859	140034411	99	-	.	Parent=FBgn0037254.2.mrna1;Target=FBgn0037254.2 1 2553 +
Chr2	stalkie_big_nohaplotig	CDS	140030711	140031349	.	-	0	Parent=FBgn0037254.2.mrna1;Target=FBgn0037254.2 2554 3192 +
Chr2	stalkie_big_nohaplotig	CDS	140031859	140034411	.	-	0	Parent=FBgn0037254.2.mrna1;Target=FBgn0037254.2 1 2553 +
Chr2	gffcl	locus	140126761	140128129	.	-	.	ID=RLOC_00022148;geneIDs=ORF1308.path1;transcripts=ORF1308.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140126761	140128129	.	-	.	ID=ORF1308.mrna1;geneID=ORF1308.path1;Name=ORF1308;Dir=sensecoverage=100.0;identity=98.2;matches=1125;mismatches=15;indels=6;unknowns=0;locus=RLOC_00022148
Chr2	stalkie_big_nohaplotig	exon	140126761	140127071	98	-	.	Parent=ORF1308.mrna1;Target=ORF1308 836 1146 +
Chr2	stalkie_big_nohaplotig	exon	140127131	140127241	98	-	.	Parent=ORF1308.mrna1;Target=ORF1308 725 835 +
Chr2	stalkie_big_nohaplotig	exon	140127298	140127420	99	-	.	Parent=ORF1308.mrna1;Target=ORF1308 602 724 +
Chr2	stalkie_big_nohaplotig	exon	140127476	140127586	98	-	.	Parent=ORF1308.mrna1;Target=ORF1308 491 601 +
Chr2	stalkie_big_nohaplotig	exon	140127646	140128129	97	-	.	Parent=ORF1308.mrna1;Target=ORF1308 1 490 +
Chr2	stalkie_big_nohaplotig	CDS	140126761	140127071	.	-	2	Parent=ORF1308.mrna1;Target=ORF1308 836 1146 +
Chr2	stalkie_big_nohaplotig	CDS	140127131	140127241	.	-	2	Parent=ORF1308.mrna1;Target=ORF1308 725 835 +
Chr2	stalkie_big_nohaplotig	CDS	140127298	140127420	.	-	2	Parent=ORF1308.mrna1;Target=ORF1308 602 724 +
Chr2	stalkie_big_nohaplotig	CDS	140127476	140127586	.	-	2	Parent=ORF1308.mrna1;Target=ORF1308 491 601 +
Chr2	stalkie_big_nohaplotig	CDS	140127646	140128129	.	-	0	Parent=ORF1308.mrna1;Target=ORF1308 1 490 +
Chr2	gffcl	locus	140165262	140168082	.	+	.	ID=RLOC_00022149;geneIDs=FBgn0037228.1.path1;transcripts=FBgn0037228.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140165262	140168082	.	+	.	ID=FBgn0037228.1.mrna1;geneID=FBgn0037228.1.path1;Name=FBgn0037228.1;Dir=sensecoverage=100.0;identity=99.2;matches=1068;mismatches=8;indels=1;unknowns=0;Target=FBgn0037228.1 3 44 +;locus=RLOC_00022149
Chr2	stalkie_big_nohaplotig	exon	140165262	140165378	99	+	.	Parent=FBgn0037228.1.mrna1;Target=FBgn0037228.1 1 118 +
Chr2	stalkie_big_nohaplotig	exon	140167124	140168082	99	+	.	Parent=FBgn0037228.1.mrna1;Target=FBgn0037228.1 119 1077 +
Chr2	stalkie_big_nohaplotig	CDS	140165264	140165304	.	+	0	Parent=FBgn0037228.1.mrna1
Chr2	gffcl	locus	140168210	140169019	.	-	.	ID=RLOC_00022150;geneIDs=FBgn0037229.1.path1;transcripts=FBgn0037229.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140168210	140169019	.	-	.	ID=FBgn0037229.1.mrna1;geneID=FBgn0037229.1.path1;Name=FBgn0037229.1;Dir=sensecoverage=100.0;identity=99.9;matches=707;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022150
Chr2	stalkie_big_nohaplotig	exon	140168210	140168361	99	-	.	Parent=FBgn0037229.1.mrna1;Target=FBgn0037229.1 557 708 +
Chr2	stalkie_big_nohaplotig	exon	140168464	140169019	100	-	.	Parent=FBgn0037229.1.mrna1;Target=FBgn0037229.1 1 556 +
Chr2	stalkie_big_nohaplotig	CDS	140168210	140168361	.	-	2	Parent=FBgn0037229.1.mrna1;Target=FBgn0037229.1 557 708 +
Chr2	stalkie_big_nohaplotig	CDS	140168464	140169019	.	-	0	Parent=FBgn0037229.1.mrna1;Target=FBgn0037229.1 1 556 +
Chr2	gffcl	locus	140245687	140247144	.	-	.	ID=RLOC_00022152;geneIDs=ORF1827.path1;transcripts=ORF1827.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140245687	140247144	.	-	.	ID=ORF1827.mrna1;geneID=ORF1827.path1;Name=ORF1827;Dir=sensecoverage=100.0;identity=99.6;matches=983;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022152
Chr2	stalkie_big_nohaplotig	exon	140245687	140245881	99	-	.	Parent=ORF1827.mrna1;Target=ORF1827 793 987 +
Chr2	stalkie_big_nohaplotig	exon	140245949	140246200	100	-	.	Parent=ORF1827.mrna1;Target=ORF1827 541 792 +
Chr2	stalkie_big_nohaplotig	exon	140246256	140246377	100	-	.	Parent=ORF1827.mrna1;Target=ORF1827 419 540 +
Chr2	stalkie_big_nohaplotig	exon	140246663	140246778	100	-	.	Parent=ORF1827.mrna1;Target=ORF1827 303 418 +
Chr2	stalkie_big_nohaplotig	exon	140246843	140247144	99	-	.	Parent=ORF1827.mrna1;Target=ORF1827 1 302 +
Chr2	stalkie_big_nohaplotig	CDS	140245687	140245881	.	-	0	Parent=ORF1827.mrna1;Target=ORF1827 793 987 +
Chr2	stalkie_big_nohaplotig	CDS	140245949	140246200	.	-	0	Parent=ORF1827.mrna1;Target=ORF1827 541 792 +
Chr2	stalkie_big_nohaplotig	CDS	140246256	140246377	.	-	2	Parent=ORF1827.mrna1;Target=ORF1827 419 540 +
Chr2	stalkie_big_nohaplotig	CDS	140246663	140246778	.	-	1	Parent=ORF1827.mrna1;Target=ORF1827 303 418 +
Chr2	stalkie_big_nohaplotig	CDS	140246843	140247144	.	-	0	Parent=ORF1827.mrna1;Target=ORF1827 1 302 +
Chr2	gffcl	locus	140310681	140311886	.	-	.	ID=RLOC_00022153;geneIDs=ORF1290.path1;transcripts=ORF1290.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140310681	140311886	.	-	.	ID=ORF1290.mrna1;geneID=ORF1290.path1;Name=ORF1290;Dir=sensecoverage=99.3;identity=98.8;matches=1130;mismatches=14;indels=0;unknowns=0;locus=RLOC_00022153
Chr2	stalkie_big_nohaplotig	exon	140310681	140310857	99	-	.	Parent=ORF1290.mrna1;Target=ORF1290 976 1152 +
Chr2	stalkie_big_nohaplotig	exon	140310920	140311886	98	-	.	Parent=ORF1290.mrna1;Target=ORF1290 9 975 +
Chr2	stalkie_big_nohaplotig	CDS	140310681	140310857	.	-	0	Parent=ORF1290.mrna1;Target=ORF1290 976 1152 +
Chr2	stalkie_big_nohaplotig	CDS	140310920	140311885	.	-	0	Parent=ORF1290.mrna1;Target=ORF1290 10 975 +
Chr2	gffcl	locus	140313225	140314725	.	-	.	ID=RLOC_00022154;geneIDs=comp119617_c0_seq1.path1;transcripts=comp119617_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140313225	140314725	.	-	.	ID=comp119617_c0_seq1.mrna1;geneID=comp119617_c0_seq1.path1;Name=comp119617_c0_seq1;Dir=antisensecoverage=99.8;identity=98.0;matches=926;mismatches=18;indels=1;unknowns=0;Target=comp119617_c0_seq1 171 428 .;locus=RLOC_00022154
Chr2	stalkie_big_nohaplotig	exon	140313225	140313676	99	-	.	Parent=comp119617_c0_seq1.mrna1;Target=comp119617_c0_seq1 3 454 -
Chr2	stalkie_big_nohaplotig	exon	140314234	140314725	96	-	.	Parent=comp119617_c0_seq1.mrna1;Target=comp119617_c0_seq1 455 947 -
Chr2	stalkie_big_nohaplotig	CDS	140313393	140313650	.	-	0	Parent=comp119617_c0_seq1.mrna1
Chr2	gffcl	locus	140344912	140345835	.	-	.	ID=RLOC_00022155;geneIDs=FBgn0039444.1.path1;transcripts=FBgn0039444.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140344912	140345835	.	-	.	ID=FBgn0039444.1.mrna1;geneID=FBgn0039444.1.path1;Name=FBgn0039444.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=922;mismatches=2;indels=0;unknowns=0;Target=FBgn0039444.1 924 1 .;locus=RLOC_00022155
Chr2	stalkie_big_nohaplotig	exon	140344912	140345835	99	-	.	Parent=FBgn0039444.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	140344912	140345835	.	-	0	Parent=FBgn0039444.1.mrna1
Chr2	gffcl	locus	140350440	140351228	.	-	.	ID=RLOC_00022156;geneIDs=ORF2913.path2;transcripts=ORF2913.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	140350440	140351228	.	-	.	ID=ORF2913.mrna2;geneID=ORF2913.path2;Name=ORF2913;Dir=indeterminatecoverage=100.0;identity=99.6;matches=786;mismatches=3;indels=0;unknowns=0;Target=ORF2913 789 1 .;locus=RLOC_00022156
Chr2	stalkie_big_nohaplotig	exon	140350440	140351228	99	-	.	Parent=ORF2913.mrna2
Chr2	stalkie_big_nohaplotig	CDS	140350440	140351228	.	-	0	Parent=ORF2913.mrna2
Chr2	gffcl	locus	140364697	140368243	.	+	.	ID=RLOC_00022157;geneIDs=FBgn0037222.1.path1;transcripts=FBgn0037222.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140364697	140368243	.	+	.	ID=FBgn0037222.1.mrna1;geneID=FBgn0037222.1.path1;Name=FBgn0037222.1;Dir=sensecoverage=100.0;identity=99.3;matches=1135;mismatches=8;indels=0;unknowns=0;locus=RLOC_00022157
Chr2	stalkie_big_nohaplotig	exon	140364697	140365018	100	+	.	Parent=FBgn0037222.1.mrna1;Target=FBgn0037222.1 1 322 +
Chr2	stalkie_big_nohaplotig	exon	140365093	140365208	100	+	.	Parent=FBgn0037222.1.mrna1;Target=FBgn0037222.1 323 438 +
Chr2	stalkie_big_nohaplotig	exon	140367351	140367460	98	+	.	Parent=FBgn0037222.1.mrna1;Target=FBgn0037222.1 439 548 +
Chr2	stalkie_big_nohaplotig	exon	140367519	140367683	96	+	.	Parent=FBgn0037222.1.mrna1;Target=FBgn0037222.1 549 713 +
Chr2	stalkie_big_nohaplotig	exon	140367755	140368007	100	+	.	Parent=FBgn0037222.1.mrna1;Target=FBgn0037222.1 714 966 +
Chr2	stalkie_big_nohaplotig	exon	140368067	140368243	100	+	.	Parent=FBgn0037222.1.mrna1;Target=FBgn0037222.1 967 1143 +
Chr2	stalkie_big_nohaplotig	CDS	140364697	140365018	.	+	0	Parent=FBgn0037222.1.mrna1;Target=FBgn0037222.1 1 322 +
Chr2	stalkie_big_nohaplotig	CDS	140365093	140365208	.	+	2	Parent=FBgn0037222.1.mrna1;Target=FBgn0037222.1 323 438 +
Chr2	stalkie_big_nohaplotig	CDS	140367351	140367460	.	+	0	Parent=FBgn0037222.1.mrna1;Target=FBgn0037222.1 439 548 +
Chr2	stalkie_big_nohaplotig	CDS	140367519	140367683	.	+	1	Parent=FBgn0037222.1.mrna1;Target=FBgn0037222.1 549 713 +
Chr2	stalkie_big_nohaplotig	CDS	140367755	140368007	.	+	1	Parent=FBgn0037222.1.mrna1;Target=FBgn0037222.1 714 966 +
Chr2	stalkie_big_nohaplotig	CDS	140368067	140368243	.	+	0	Parent=FBgn0037222.1.mrna1;Target=FBgn0037222.1 967 1143 +
Chr2	gffcl	locus	140368333	140371274	.	-	.	ID=RLOC_00022158;geneIDs=FBgn0030051.2.path1;transcripts=FBgn0030051.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140368333	140371274	.	-	.	ID=FBgn0030051.2.mrna1;geneID=FBgn0030051.2.path1;Name=FBgn0030051.2;Dir=sensecoverage=100.0;identity=99.8;matches=1084;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022158
Chr2	stalkie_big_nohaplotig	exon	140368333	140368509	100	-	.	Parent=FBgn0030051.2.mrna1;Target=FBgn0030051.2 910 1086 +
Chr2	stalkie_big_nohaplotig	exon	140368605	140368762	100	-	.	Parent=FBgn0030051.2.mrna1;Target=FBgn0030051.2 752 909 +
Chr2	stalkie_big_nohaplotig	exon	140368840	140368922	100	-	.	Parent=FBgn0030051.2.mrna1;Target=FBgn0030051.2 669 751 +
Chr2	stalkie_big_nohaplotig	exon	140368990	140369142	100	-	.	Parent=FBgn0030051.2.mrna1;Target=FBgn0030051.2 516 668 +
Chr2	stalkie_big_nohaplotig	exon	140370547	140370659	100	-	.	Parent=FBgn0030051.2.mrna1;Target=FBgn0030051.2 403 515 +
Chr2	stalkie_big_nohaplotig	exon	140370748	140370824	100	-	.	Parent=FBgn0030051.2.mrna1;Target=FBgn0030051.2 326 402 +
Chr2	stalkie_big_nohaplotig	exon	140370882	140371082	99	-	.	Parent=FBgn0030051.2.mrna1;Target=FBgn0030051.2 125 325 +
Chr2	stalkie_big_nohaplotig	exon	140371151	140371274	99	-	.	Parent=FBgn0030051.2.mrna1;Target=FBgn0030051.2 1 124 +
Chr2	stalkie_big_nohaplotig	CDS	140368333	140368509	.	-	0	Parent=FBgn0030051.2.mrna1;Target=FBgn0030051.2 910 1086 +
Chr2	stalkie_big_nohaplotig	CDS	140368605	140368762	.	-	2	Parent=FBgn0030051.2.mrna1;Target=FBgn0030051.2 752 909 +
Chr2	stalkie_big_nohaplotig	CDS	140368840	140368922	.	-	1	Parent=FBgn0030051.2.mrna1;Target=FBgn0030051.2 669 751 +
Chr2	stalkie_big_nohaplotig	CDS	140368990	140369142	.	-	1	Parent=FBgn0030051.2.mrna1;Target=FBgn0030051.2 516 668 +
Chr2	stalkie_big_nohaplotig	CDS	140370547	140370659	.	-	0	Parent=FBgn0030051.2.mrna1;Target=FBgn0030051.2 403 515 +
Chr2	stalkie_big_nohaplotig	CDS	140370748	140370824	.	-	2	Parent=FBgn0030051.2.mrna1;Target=FBgn0030051.2 326 402 +
Chr2	stalkie_big_nohaplotig	CDS	140370882	140371082	.	-	2	Parent=FBgn0030051.2.mrna1;Target=FBgn0030051.2 125 325 +
Chr2	stalkie_big_nohaplotig	CDS	140371151	140371274	.	-	0	Parent=FBgn0030051.2.mrna1;Target=FBgn0030051.2 1 124 +
Chr2	gffcl	locus	140382630	140387631	.	-	.	ID=RLOC_00022160;geneIDs=FBgn0030051.8.path1,comp160346_c0_seq1.path1;transcripts=FBgn0030051.8.mrna1,comp160346_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140382630	140387322	.	-	.	ID=FBgn0030051.8.mrna1;geneID=FBgn0030051.8.path1;Name=FBgn0030051.8;Dir=sensecoverage=99.7;identity=99.6;matches=1203;mismatches=5;indels=0;unknowns=0;locus=RLOC_00022160
Chr2	stalkie_big_nohaplotig	exon	140382630	140382793	98	-	.	Parent=FBgn0030051.8.mrna1;Target=FBgn0030051.8 1045 1208 +
Chr2	stalkie_big_nohaplotig	exon	140383036	140383193	100	-	.	Parent=FBgn0030051.8.mrna1;Target=FBgn0030051.8 887 1044 +
Chr2	stalkie_big_nohaplotig	exon	140383252	140383337	100	-	.	Parent=FBgn0030051.8.mrna1;Target=FBgn0030051.8 801 886 +
Chr2	stalkie_big_nohaplotig	exon	140383518	140383673	100	-	.	Parent=FBgn0030051.8.mrna1;Target=FBgn0030051.8 645 800 +
Chr2	stalkie_big_nohaplotig	exon	140383737	140383849	100	-	.	Parent=FBgn0030051.8.mrna1;Target=FBgn0030051.8 532 644 +
Chr2	stalkie_big_nohaplotig	exon	140384230	140384306	100	-	.	Parent=FBgn0030051.8.mrna1;Target=FBgn0030051.8 455 531 +
Chr2	stalkie_big_nohaplotig	exon	140384373	140384603	100	-	.	Parent=FBgn0030051.8.mrna1;Target=FBgn0030051.8 224 454 +
Chr2	stalkie_big_nohaplotig	exon	140387050	140387188	100	-	.	Parent=FBgn0030051.8.mrna1;Target=FBgn0030051.8 85 223 +
Chr2	stalkie_big_nohaplotig	exon	140387239	140387322	97	-	.	Parent=FBgn0030051.8.mrna1;Target=FBgn0030051.8 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	140382632	140382793	.	-	0	Parent=FBgn0030051.8.mrna1;Target=FBgn0030051.8 1045 1206 +
Chr2	stalkie_big_nohaplotig	CDS	140383036	140383193	.	-	2	Parent=FBgn0030051.8.mrna1;Target=FBgn0030051.8 887 1044 +
Chr2	stalkie_big_nohaplotig	CDS	140383252	140383337	.	-	1	Parent=FBgn0030051.8.mrna1;Target=FBgn0030051.8 801 886 +
Chr2	stalkie_big_nohaplotig	CDS	140383518	140383673	.	-	1	Parent=FBgn0030051.8.mrna1;Target=FBgn0030051.8 645 800 +
Chr2	stalkie_big_nohaplotig	CDS	140383737	140383849	.	-	0	Parent=FBgn0030051.8.mrna1;Target=FBgn0030051.8 532 644 +
Chr2	stalkie_big_nohaplotig	CDS	140384230	140384306	.	-	2	Parent=FBgn0030051.8.mrna1;Target=FBgn0030051.8 455 531 +
Chr2	stalkie_big_nohaplotig	CDS	140384373	140384603	.	-	2	Parent=FBgn0030051.8.mrna1;Target=FBgn0030051.8 224 454 +
Chr2	stalkie_big_nohaplotig	CDS	140387050	140387188	.	-	0	Parent=FBgn0030051.8.mrna1;Target=FBgn0030051.8 85 223 +
Chr2	stalkie_big_nohaplotig	CDS	140387239	140387322	.	-	0	Parent=FBgn0030051.8.mrna1;Target=FBgn0030051.8 1 84 +
Chr2	stalkie_big_nohaplotig	mRNA	140385904	140387631	.	-	.	ID=comp160346_c0_seq1.mrna1;geneID=comp160346_c0_seq1.path1;Name=comp160346_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=1617;mismatches=8;indels=0;unknowns=0;locus=RLOC_00022160
Chr2	stalkie_big_nohaplotig	exon	140385904	140387188	99	-	.	Parent=comp160346_c0_seq1.mrna1;Target=comp160346_c0_seq1 1 1285 -
Chr2	stalkie_big_nohaplotig	exon	140387239	140387496	97	-	.	Parent=comp160346_c0_seq1.mrna1;Target=comp160346_c0_seq1 1286 1543 -
Chr2	stalkie_big_nohaplotig	exon	140387550	140387631	100	-	.	Parent=comp160346_c0_seq1.mrna1;Target=comp160346_c0_seq1 1544 1625 -
Chr2	stalkie_big_nohaplotig	CDS	140387161	140387188	.	-	1	Parent=comp160346_c0_seq1.mrna1;Target=comp160346_c0_seq1 1258 1285 .
Chr2	stalkie_big_nohaplotig	CDS	140387239	140387420	.	-	0	Parent=comp160346_c0_seq1.mrna1;Target=comp160346_c0_seq1 1286 1467 .
Chr2	gffcl	locus	140389708	140390485	.	-	.	ID=RLOC_00022161;geneIDs=comp146236_c0_seq1.path1;transcripts=comp146236_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140389708	140390485	.	-	.	ID=comp146236_c0_seq1.mrna1;geneID=comp146236_c0_seq1.path1;Name=comp146236_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=351;mismatches=4;indels=0;unknowns=0;Target=comp146236_c0_seq1 240 353 .;locus=RLOC_00022161
Chr2	stalkie_big_nohaplotig	exon	140389708	140389731	100	-	.	Parent=comp146236_c0_seq1.mrna1;Target=comp146236_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	exon	140390155	140390485	98	-	.	Parent=comp146236_c0_seq1.mrna1;Target=comp146236_c0_seq1 25 355 -
Chr2	stalkie_big_nohaplotig	CDS	140390370	140390483	.	-	0	Parent=comp146236_c0_seq1.mrna1
Chr2	gffcl	locus	140403553	140404259	.	+	.	ID=RLOC_00022162;geneIDs=FBgn0012042.1.path1;transcripts=FBgn0012042.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140403553	140404259	.	+	.	ID=FBgn0012042.1.mrna1;geneID=FBgn0012042.1.path1;Name=FBgn0012042.1;Dir=sensecoverage=100.0;identity=99.7;matches=640;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022162
Chr2	stalkie_big_nohaplotig	exon	140403553	140403794	99	+	.	Parent=FBgn0012042.1.mrna1;Target=FBgn0012042.1 1 242 +
Chr2	stalkie_big_nohaplotig	exon	140403860	140404259	100	+	.	Parent=FBgn0012042.1.mrna1;Target=FBgn0012042.1 243 642 +
Chr2	stalkie_big_nohaplotig	CDS	140403553	140403794	.	+	0	Parent=FBgn0012042.1.mrna1;Target=FBgn0012042.1 1 242 +
Chr2	stalkie_big_nohaplotig	CDS	140403860	140404259	.	+	1	Parent=FBgn0012042.1.mrna1;Target=FBgn0012042.1 243 642 +
Chr2	gffcl	locus	140440934	140472629	.	-	.	ID=RLOC_00022163;geneIDs=FBgn0010225.1.path1;transcripts=FBgn0010225.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140440934	140472629	.	-	.	ID=FBgn0010225.1.mrna1;geneID=FBgn0010225.1.path1;Name=FBgn0010225.1;Dir=sensecoverage=100.0;identity=99.5;matches=2477;mismatches=13;indels=0;unknowns=0;locus=RLOC_00022163
Chr2	stalkie_big_nohaplotig	exon	140440934	140441005	100	-	.	Parent=FBgn0010225.1.mrna1;Target=FBgn0010225.1 2419 2490 +
Chr2	stalkie_big_nohaplotig	exon	140443139	140443264	99	-	.	Parent=FBgn0010225.1.mrna1;Target=FBgn0010225.1 2293 2418 +
Chr2	stalkie_big_nohaplotig	exon	140443327	140443437	99	-	.	Parent=FBgn0010225.1.mrna1;Target=FBgn0010225.1 2182 2292 +
Chr2	stalkie_big_nohaplotig	exon	140443662	140443910	100	-	.	Parent=FBgn0010225.1.mrna1;Target=FBgn0010225.1 1933 2181 +
Chr2	stalkie_big_nohaplotig	exon	140443972	140444445	99	-	.	Parent=FBgn0010225.1.mrna1;Target=FBgn0010225.1 1459 1932 +
Chr2	stalkie_big_nohaplotig	exon	140444608	140445194	99	-	.	Parent=FBgn0010225.1.mrna1;Target=FBgn0010225.1 872 1458 +
Chr2	stalkie_big_nohaplotig	exon	140445308	140445601	100	-	.	Parent=FBgn0010225.1.mrna1;Target=FBgn0010225.1 578 871 +
Chr2	stalkie_big_nohaplotig	exon	140446994	140447186	100	-	.	Parent=FBgn0010225.1.mrna1;Target=FBgn0010225.1 385 577 +
Chr2	stalkie_big_nohaplotig	exon	140447829	140447903	100	-	.	Parent=FBgn0010225.1.mrna1;Target=FBgn0010225.1 310 384 +
Chr2	stalkie_big_nohaplotig	exon	140460217	140460415	100	-	.	Parent=FBgn0010225.1.mrna1;Target=FBgn0010225.1 111 309 +
Chr2	stalkie_big_nohaplotig	exon	140472520	140472629	98	-	.	Parent=FBgn0010225.1.mrna1;Target=FBgn0010225.1 1 110 +
Chr2	stalkie_big_nohaplotig	CDS	140440934	140441005	.	-	0	Parent=FBgn0010225.1.mrna1;Target=FBgn0010225.1 2419 2490 +
Chr2	stalkie_big_nohaplotig	CDS	140443139	140443264	.	-	0	Parent=FBgn0010225.1.mrna1;Target=FBgn0010225.1 2293 2418 +
Chr2	stalkie_big_nohaplotig	CDS	140443327	140443437	.	-	0	Parent=FBgn0010225.1.mrna1;Target=FBgn0010225.1 2182 2292 +
Chr2	stalkie_big_nohaplotig	CDS	140443662	140443910	.	-	0	Parent=FBgn0010225.1.mrna1;Target=FBgn0010225.1 1933 2181 +
Chr2	stalkie_big_nohaplotig	CDS	140443972	140444445	.	-	0	Parent=FBgn0010225.1.mrna1;Target=FBgn0010225.1 1459 1932 +
Chr2	stalkie_big_nohaplotig	CDS	140444608	140445194	.	-	2	Parent=FBgn0010225.1.mrna1;Target=FBgn0010225.1 872 1458 +
Chr2	stalkie_big_nohaplotig	CDS	140445308	140445601	.	-	2	Parent=FBgn0010225.1.mrna1;Target=FBgn0010225.1 578 871 +
Chr2	stalkie_big_nohaplotig	CDS	140446994	140447186	.	-	0	Parent=FBgn0010225.1.mrna1;Target=FBgn0010225.1 385 577 +
Chr2	stalkie_big_nohaplotig	CDS	140447829	140447903	.	-	0	Parent=FBgn0010225.1.mrna1;Target=FBgn0010225.1 310 384 +
Chr2	stalkie_big_nohaplotig	CDS	140460217	140460415	.	-	1	Parent=FBgn0010225.1.mrna1;Target=FBgn0010225.1 111 309 +
Chr2	stalkie_big_nohaplotig	CDS	140472520	140472629	.	-	0	Parent=FBgn0010225.1.mrna1;Target=FBgn0010225.1 1 110 +
Chr2	gffcl	locus	140484091	140484477	.	-	.	ID=RLOC_00022164;geneIDs=FBgn0053817.2.path9;transcripts=FBgn0053817.2.mrna9
Chr2	stalkie_big_nohaplotig	mRNA	140484091	140484477	.	-	.	ID=FBgn0053817.2.mrna9;geneID=FBgn0053817.2.path9;Name=FBgn0053817.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=387;mismatches=0;indels=0;unknowns=0;Target=FBgn0053817.2 387 1 .;locus=RLOC_00022164
Chr2	stalkie_big_nohaplotig	exon	140484091	140484477	100	-	.	Parent=FBgn0053817.2.mrna9
Chr2	stalkie_big_nohaplotig	CDS	140484091	140484477	.	-	0	Parent=FBgn0053817.2.mrna9
Chr2	gffcl	locus	140488696	140489081	.	+	.	ID=RLOC_00022165;geneIDs=FBgn0053870.2.path9;transcripts=FBgn0053870.2.mrna9
Chr2	stalkie_big_nohaplotig	mRNA	140488696	140489081	.	+	.	ID=FBgn0053870.2.mrna9;geneID=FBgn0053870.2.path9;Name=FBgn0053870.2;Dir=indeterminatecoverage=99.7;identity=100.0;matches=386;mismatches=0;indels=0;unknowns=0;Target=FBgn0053870.2 387 2 .;CDS_Target=FBgn0053870.2 387 4 .;locus=RLOC_00022165
Chr2	stalkie_big_nohaplotig	exon	140488696	140489081	100	+	.	Parent=FBgn0053870.2.mrna9
Chr2	stalkie_big_nohaplotig	CDS	140488698	140489081	.	+	0	Parent=FBgn0053870.2.mrna9
Chr2	gffcl	locus	140495860	140501029	.	-	.	ID=RLOC_00022166;geneIDs=FBgn0038080.1.path1;transcripts=FBgn0038080.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140495860	140501029	.	-	.	ID=FBgn0038080.1.mrna1;geneID=FBgn0038080.1.path1;Name=FBgn0038080.1;Dir=sensecoverage=100.0;identity=99.1;matches=342;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022166
Chr2	stalkie_big_nohaplotig	exon	140495860	140495914	100	-	.	Parent=FBgn0038080.1.mrna1;Target=FBgn0038080.1 291 345 +
Chr2	stalkie_big_nohaplotig	exon	140495986	140496145	99	-	.	Parent=FBgn0038080.1.mrna1;Target=FBgn0038080.1 131 290 +
Chr2	stalkie_big_nohaplotig	exon	140500900	140501029	98	-	.	Parent=FBgn0038080.1.mrna1;Target=FBgn0038080.1 1 130 +
Chr2	stalkie_big_nohaplotig	CDS	140495860	140495914	.	-	1	Parent=FBgn0038080.1.mrna1;Target=FBgn0038080.1 291 345 +
Chr2	stalkie_big_nohaplotig	CDS	140495986	140496145	.	-	2	Parent=FBgn0038080.1.mrna1;Target=FBgn0038080.1 131 290 +
Chr2	stalkie_big_nohaplotig	CDS	140500900	140501029	.	-	0	Parent=FBgn0038080.1.mrna1;Target=FBgn0038080.1 1 130 +
Chr2	gffcl	locus	140505471	140525703	.	-	.	ID=RLOC_00022167;geneIDs=FBgn0016693.1.path1,comp157213_c4_seq1.path1;transcripts=comp157213_c4_seq1.mrna1,FBgn0016693.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140505471	140525475	.	-	.	ID=comp157213_c4_seq1.mrna1;geneID=comp157213_c4_seq1.path1;Name=comp157213_c4_seq1;Dir=sensecoverage=100.0;identity=99.7;matches=2227;mismatches=6;indels=0;unknowns=0;locus=RLOC_00022167
Chr2	stalkie_big_nohaplotig	exon	140505471	140505706	100	-	.	Parent=comp157213_c4_seq1.mrna1;Target=comp157213_c4_seq1 1998 2233 +
Chr2	stalkie_big_nohaplotig	exon	140505770	140505943	98	-	.	Parent=comp157213_c4_seq1.mrna1;Target=comp157213_c4_seq1 1824 1997 +
Chr2	stalkie_big_nohaplotig	exon	140523504	140525303	99	-	.	Parent=comp157213_c4_seq1.mrna1;Target=comp157213_c4_seq1 24 1823 +
Chr2	stalkie_big_nohaplotig	exon	140525453	140525475	100	-	.	Parent=comp157213_c4_seq1.mrna1;Target=comp157213_c4_seq1 1 23 +
Chr2	stalkie_big_nohaplotig	CDS	140505507	140505706	.	-	2	Parent=comp157213_c4_seq1.mrna1;Target=comp157213_c4_seq1 1998 2197 +
Chr2	stalkie_big_nohaplotig	CDS	140505770	140505943	.	-	2	Parent=comp157213_c4_seq1.mrna1;Target=comp157213_c4_seq1 1824 1997 +
Chr2	stalkie_big_nohaplotig	CDS	140523504	140524728	.	-	0	Parent=comp157213_c4_seq1.mrna1;Target=comp157213_c4_seq1 599 1823 +
Chr2	stalkie_big_nohaplotig	mRNA	140505510	140525703	.	-	.	ID=FBgn0016693.1.mrna1;geneID=FBgn0016693.1.path1;Name=FBgn0016693.1;Dir=sensecoverage=99.7;identity=99.8;matches=1718;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022167
Chr2	stalkie_big_nohaplotig	exon	140505510	140505706	100	-	.	Parent=FBgn0016693.1.mrna1;Target=FBgn0016693.1 1532 1728 +
Chr2	stalkie_big_nohaplotig	exon	140505770	140505943	98	-	.	Parent=FBgn0016693.1.mrna1;Target=FBgn0016693.1 1358 1531 +
Chr2	stalkie_big_nohaplotig	exon	140523504	140524753	99	-	.	Parent=FBgn0016693.1.mrna1;Target=FBgn0016693.1 108 1357 +
Chr2	stalkie_big_nohaplotig	exon	140525603	140525703	100	-	.	Parent=FBgn0016693.1.mrna1;Target=FBgn0016693.1 7 107 +
Chr2	stalkie_big_nohaplotig	CDS	140505510	140505706	.	-	2	Parent=FBgn0016693.1.mrna1;Target=FBgn0016693.1 1532 1728 +
Chr2	stalkie_big_nohaplotig	CDS	140505770	140505943	.	-	2	Parent=FBgn0016693.1.mrna1;Target=FBgn0016693.1 1358 1531 +
Chr2	stalkie_big_nohaplotig	CDS	140523504	140524753	.	-	1	Parent=FBgn0016693.1.mrna1;Target=FBgn0016693.1 108 1357 +
Chr2	stalkie_big_nohaplotig	CDS	140525603	140525703	.	-	0	Parent=FBgn0016693.1.mrna1;Target=FBgn0016693.1 7 107 +
Chr2	gffcl	locus	140527390	140527855	.	-	.	ID=RLOC_00022168;geneIDs=comp142277_c0_seq1.path1;transcripts=comp142277_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140527390	140527855	.	-	.	ID=comp142277_c0_seq1.mrna1;geneID=comp142277_c0_seq1.path1;Name=comp142277_c0_seq1;Dir=indeterminatecoverage=98.1;identity=98.7;matches=464;mismatches=2;indels=4;unknowns=0;Target=comp142277_c0_seq1 479 10 .;CDS_Target=comp142277_c0_seq1 122 60 .;locus=RLOC_00022168
Chr2	stalkie_big_nohaplotig	exon	140527390	140527855	98	-	.	Parent=comp142277_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	140527744	140527805	.	-	0	Parent=comp142277_c0_seq1.mrna1
Chr2	gffcl	locus	140528561	140529846	.	-	.	ID=RLOC_00022169;geneIDs=FBgn0038659.1.path1;transcripts=FBgn0038659.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140528561	140529846	.	-	.	ID=FBgn0038659.1.mrna1;geneID=FBgn0038659.1.path1;Name=FBgn0038659.1;Dir=sensecoverage=100.0;identity=100.0;matches=1230;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022169
Chr2	stalkie_big_nohaplotig	exon	140528561	140529693	100	-	.	Parent=FBgn0038659.1.mrna1;Target=FBgn0038659.1 98 1230 +
Chr2	stalkie_big_nohaplotig	exon	140529750	140529846	100	-	.	Parent=FBgn0038659.1.mrna1;Target=FBgn0038659.1 1 97 +
Chr2	stalkie_big_nohaplotig	CDS	140528561	140529693	.	-	2	Parent=FBgn0038659.1.mrna1;Target=FBgn0038659.1 98 1230 +
Chr2	stalkie_big_nohaplotig	CDS	140529750	140529846	.	-	0	Parent=FBgn0038659.1.mrna1;Target=FBgn0038659.1 1 97 +
Chr2	gffcl	locus	140532049	140532894	.	+	.	ID=RLOC_00022170;geneIDs=comp156791_c1_seq1.path1;transcripts=comp156791_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140532049	140532894	.	+	.	ID=comp156791_c1_seq1.mrna1;geneID=comp156791_c1_seq1.path1;Name=comp156791_c1_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=768;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022170
Chr2	stalkie_big_nohaplotig	exon	140532049	140532326	99	+	.	Parent=comp156791_c1_seq1.mrna1;Target=comp156791_c1_seq1 1 278 +
Chr2	stalkie_big_nohaplotig	exon	140532401	140532894	99	+	.	Parent=comp156791_c1_seq1.mrna1;Target=comp156791_c1_seq1 279 772 +
Chr2	stalkie_big_nohaplotig	CDS	140532282	140532326	.	+	0	Parent=comp156791_c1_seq1.mrna1;Target=comp156791_c1_seq1 234 278 +
Chr2	stalkie_big_nohaplotig	CDS	140532401	140532700	.	+	0	Parent=comp156791_c1_seq1.mrna1;Target=comp156791_c1_seq1 279 578 +
Chr2	gffcl	locus	140543058	140543728	.	+	.	ID=RLOC_00022171;geneIDs=comp156401_c0_seq1.path1;transcripts=comp156401_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140543058	140543728	.	+	.	ID=comp156401_c0_seq1.mrna1;geneID=comp156401_c0_seq1.path1;Name=comp156401_c0_seq1;Dir=sensecoverage=100.0;identity=96.0;matches=602;mismatches=2;indels=23;unknowns=0;locus=RLOC_00022171
Chr2	stalkie_big_nohaplotig	exon	140543058	140543185	100	+	.	Parent=comp156401_c0_seq1.mrna1;Target=comp156401_c0_seq1 1 128 +
Chr2	stalkie_big_nohaplotig	exon	140543253	140543728	94	+	.	Parent=comp156401_c0_seq1.mrna1;Target=comp156401_c0_seq1 129 627 +
Chr2	stalkie_big_nohaplotig	CDS	140543138	140543185	.	+	0	Parent=comp156401_c0_seq1.mrna1;Target=comp156401_c0_seq1 81 128 +
Chr2	stalkie_big_nohaplotig	CDS	140543253	140543663	.	+	0	Parent=comp156401_c0_seq1.mrna1;Target=comp156401_c0_seq1 129 539 +
Chr2	gffcl	locus	140551523	140553881	.	.	.	ID=RLOC_00022172;geneIDs=FBgn0003248.1.path1,comp153833_c0_seq1.path1,comp159624_c1_seq1.path1;transcripts=FBgn0003248.1.mrna1,comp153833_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140551677	140553881	.	+	.	ID=FBgn0003248.1.mrna1;geneID=FBgn0003248.1.path1;Name=FBgn0003248.1;Dir=sensecoverage=100.0;identity=99.3;matches=1165;mismatches=8;indels=0;unknowns=0;locus=RLOC_00022172
Chr2	stalkie_big_nohaplotig	exon	140551677	140551729	100	+	.	Parent=FBgn0003248.1.mrna1;Target=FBgn0003248.1 1 53 +
Chr2	stalkie_big_nohaplotig	exon	140551797	140551872	100	+	.	Parent=FBgn0003248.1.mrna1;Target=FBgn0003248.1 54 129 +
Chr2	stalkie_big_nohaplotig	exon	140552702	140553192	98	+	.	Parent=FBgn0003248.1.mrna1;Target=FBgn0003248.1 130 620 +
Chr2	stalkie_big_nohaplotig	exon	140553256	140553681	99	+	.	Parent=FBgn0003248.1.mrna1;Target=FBgn0003248.1 621 1046 +
Chr2	stalkie_big_nohaplotig	exon	140553755	140553881	99	+	.	Parent=FBgn0003248.1.mrna1;Target=FBgn0003248.1 1047 1173 +
Chr2	stalkie_big_nohaplotig	CDS	140551677	140551729	.	+	0	Parent=FBgn0003248.1.mrna1;Target=FBgn0003248.1 1 53 +
Chr2	stalkie_big_nohaplotig	CDS	140551797	140551872	.	+	1	Parent=FBgn0003248.1.mrna1;Target=FBgn0003248.1 54 129 +
Chr2	stalkie_big_nohaplotig	CDS	140552702	140553192	.	+	0	Parent=FBgn0003248.1.mrna1;Target=FBgn0003248.1 130 620 +
Chr2	stalkie_big_nohaplotig	CDS	140553256	140553681	.	+	1	Parent=FBgn0003248.1.mrna1;Target=FBgn0003248.1 621 1046 +
Chr2	stalkie_big_nohaplotig	CDS	140553755	140553881	.	+	1	Parent=FBgn0003248.1.mrna1;Target=FBgn0003248.1 1047 1173 +
Chr2	stalkie_big_nohaplotig	mRNA	140551851	140552200	.	-	.	ID=comp153833_c0_seq1.mrna1;geneID=comp153833_c0_seq1.path1;Name=comp153833_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.8;matches=334;mismatches=12;indels=18;unknowns=0;Target=comp153833_c0_seq1 360 1 .;CDS_Target=comp153833_c0_seq1 49 2 .;locus=RLOC_00022172
Chr2	stalkie_big_nohaplotig	exon	140551851	140552200	91	-	.	Parent=comp153833_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	140552152	140552199	.	-	0	Parent=comp153833_c0_seq1.mrna1
Chr2	gffcl	locus	140557170	140557259	.	-	.	ID=RLOC_00022173;geneIDs=comp163629_c1_seq1.path1;transcripts=comp163629_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140557170	140557259	.	-	.	ID=comp163629_c1_seq1.mrna1;geneID=comp163629_c1_seq1.path1;Name=comp163629_c1_seq1;Dir=indeterminatecoverage=3.2;identity=93.3;matches=84;mismatches=6;indels=0;unknowns=0;Target=comp163629_c1_seq1 90 1 .;locus=RLOC_00022173
Chr2	stalkie_big_nohaplotig	exon	140557170	140557259	93	-	.	Parent=comp163629_c1_seq1.mrna1
Chr2	gffcl	locus	140599448	140600048	.	-	.	ID=RLOC_00022174;geneIDs=comp149272_c0_seq1.path1;transcripts=comp149272_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140599448	140600048	.	-	.	ID=comp149272_c0_seq1.mrna1;geneID=comp149272_c0_seq1.path1;Name=comp149272_c0_seq1;Dir=sensecoverage=100.0;identity=96.3;matches=500;mismatches=16;indels=3;unknowns=0;Target=comp149272_c0_seq1 289 399 +;locus=RLOC_00022174
Chr2	stalkie_big_nohaplotig	exon	140599448	140599801	98	-	.	Parent=comp149272_c0_seq1.mrna1;Target=comp149272_c0_seq1 163 516 +
Chr2	stalkie_big_nohaplotig	exon	140599884	140600048	91	-	.	Parent=comp149272_c0_seq1.mrna1;Target=comp149272_c0_seq1 1 162 +
Chr2	stalkie_big_nohaplotig	CDS	140599565	140599675	.	-	0	Parent=comp149272_c0_seq1.mrna1
Chr2	gffcl	locus	140602999	140606511	.	+	.	ID=RLOC_00022175;geneIDs=FBgn0051301.1.path1;transcripts=FBgn0051301.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140602999	140606511	.	+	.	ID=FBgn0051301.1.mrna1;geneID=FBgn0051301.1.path1;Name=FBgn0051301.1;Dir=sensecoverage=100.0;identity=98.5;matches=1286;mismatches=10;indels=9;unknowns=0;locus=RLOC_00022175
Chr2	stalkie_big_nohaplotig	exon	140602999	140603320	100	+	.	Parent=FBgn0051301.1.mrna1;Target=FBgn0051301.1 1 322 +
Chr2	stalkie_big_nohaplotig	exon	140603419	140603686	94	+	.	Parent=FBgn0051301.1.mrna1;Target=FBgn0051301.1 323 599 +
Chr2	stalkie_big_nohaplotig	exon	140603761	140603893	100	+	.	Parent=FBgn0051301.1.mrna1;Target=FBgn0051301.1 600 732 +
Chr2	stalkie_big_nohaplotig	exon	140605812	140606008	98	+	.	Parent=FBgn0051301.1.mrna1;Target=FBgn0051301.1 733 929 +
Chr2	stalkie_big_nohaplotig	exon	140606068	140606229	99	+	.	Parent=FBgn0051301.1.mrna1;Target=FBgn0051301.1 930 1091 +
Chr2	stalkie_big_nohaplotig	exon	140606298	140606511	99	+	.	Parent=FBgn0051301.1.mrna1;Target=FBgn0051301.1 1092 1305 +
Chr2	stalkie_big_nohaplotig	CDS	140602999	140603320	.	+	0	Parent=FBgn0051301.1.mrna1;Target=FBgn0051301.1 1 322 +
Chr2	stalkie_big_nohaplotig	CDS	140603419	140603686	.	+	2	Parent=FBgn0051301.1.mrna1;Target=FBgn0051301.1 323 599 +
Chr2	stalkie_big_nohaplotig	CDS	140603761	140603893	.	+	1	Parent=FBgn0051301.1.mrna1;Target=FBgn0051301.1 600 732 +
Chr2	stalkie_big_nohaplotig	CDS	140605812	140606008	.	+	0	Parent=FBgn0051301.1.mrna1;Target=FBgn0051301.1 733 929 +
Chr2	stalkie_big_nohaplotig	CDS	140606068	140606229	.	+	1	Parent=FBgn0051301.1.mrna1;Target=FBgn0051301.1 930 1091 +
Chr2	stalkie_big_nohaplotig	CDS	140606298	140606511	.	+	1	Parent=FBgn0051301.1.mrna1;Target=FBgn0051301.1 1092 1305 +
Chr2	gffcl	locus	140606867	140608141	.	-	.	ID=RLOC_00022176;geneIDs=FBgn0037220.1.path1;transcripts=FBgn0037220.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140606867	140608141	.	-	.	ID=FBgn0037220.1.mrna1;geneID=FBgn0037220.1.path1;Name=FBgn0037220.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1265;mismatches=10;indels=0;unknowns=0;Target=FBgn0037220.1 1275 1 .;locus=RLOC_00022176
Chr2	stalkie_big_nohaplotig	exon	140606867	140608141	99	-	.	Parent=FBgn0037220.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	140606867	140608141	.	-	0	Parent=FBgn0037220.1.mrna1
Chr2	gffcl	locus	140610338	140612397	.	+	.	ID=RLOC_00022177;geneIDs=FBgn0015331.1.path1;transcripts=FBgn0015331.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140610338	140612397	.	+	.	ID=FBgn0015331.1.mrna1;geneID=FBgn0015331.1.path1;Name=FBgn0015331.1;Dir=sensecoverage=100.0;identity=98.8;matches=1847;mismatches=21;indels=1;unknowns=0;Target=FBgn0015331.1 3 62 +;locus=RLOC_00022177
Chr2	stalkie_big_nohaplotig	exon	140610338	140611173	99	+	.	Parent=FBgn0015331.1.mrna1;Target=FBgn0015331.1 1 837 +
Chr2	stalkie_big_nohaplotig	exon	140611237	140611768	98	+	.	Parent=FBgn0015331.1.mrna1;Target=FBgn0015331.1 838 1369 +
Chr2	stalkie_big_nohaplotig	exon	140611898	140612397	98	+	.	Parent=FBgn0015331.1.mrna1;Target=FBgn0015331.1 1370 1869 +
Chr2	stalkie_big_nohaplotig	CDS	140610340	140610398	.	+	0	Parent=FBgn0015331.1.mrna1
Chr2	gffcl	locus	140647568	140649796	.	-	.	ID=RLOC_00022179;geneIDs=FBgn0038640.1.path1;transcripts=FBgn0038640.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140647568	140649796	.	-	.	ID=FBgn0038640.1.mrna1;geneID=FBgn0038640.1.path1;Name=FBgn0038640.1;Dir=sensecoverage=100.0;identity=99.7;matches=1839;mismatches=6;indels=0;unknowns=0;locus=RLOC_00022179
Chr2	stalkie_big_nohaplotig	exon	140647568	140648065	100	-	.	Parent=FBgn0038640.1.mrna1;Target=FBgn0038640.1 1348 1845 +
Chr2	stalkie_big_nohaplotig	exon	140648128	140648322	100	-	.	Parent=FBgn0038640.1.mrna1;Target=FBgn0038640.1 1153 1347 +
Chr2	stalkie_big_nohaplotig	exon	140648588	140648724	99	-	.	Parent=FBgn0038640.1.mrna1;Target=FBgn0038640.1 1016 1152 +
Chr2	stalkie_big_nohaplotig	exon	140648782	140649796	99	-	.	Parent=FBgn0038640.1.mrna1;Target=FBgn0038640.1 1 1015 +
Chr2	stalkie_big_nohaplotig	CDS	140647568	140648065	.	-	0	Parent=FBgn0038640.1.mrna1;Target=FBgn0038640.1 1348 1845 +
Chr2	stalkie_big_nohaplotig	CDS	140648128	140648322	.	-	0	Parent=FBgn0038640.1.mrna1;Target=FBgn0038640.1 1153 1347 +
Chr2	stalkie_big_nohaplotig	CDS	140648588	140648724	.	-	2	Parent=FBgn0038640.1.mrna1;Target=FBgn0038640.1 1016 1152 +
Chr2	stalkie_big_nohaplotig	CDS	140648782	140649796	.	-	0	Parent=FBgn0038640.1.mrna1;Target=FBgn0038640.1 1 1015 +
Chr2	gffcl	locus	140664299	140664974	.	-	.	ID=RLOC_00022181;geneIDs=comp151407_c0_seq1.path1;transcripts=comp151407_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140664299	140664974	.	-	.	ID=comp151407_c0_seq1.mrna1;geneID=comp151407_c0_seq1.path1;Name=comp151407_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=670;mismatches=6;indels=0;unknowns=0;Target=comp151407_c0_seq1 676 1 .;CDS_Target=comp151407_c0_seq1 673 557 .;locus=RLOC_00022181
Chr2	stalkie_big_nohaplotig	exon	140664299	140664974	99	-	.	Parent=comp151407_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	140664302	140664418	.	-	0	Parent=comp151407_c0_seq1.mrna1
Chr2	gffcl	locus	140665410	140666834	.	-	.	ID=RLOC_00022182;geneIDs=comp145362_c0_seq1.path1,comp158375_c1_seq1.path1;transcripts=comp158375_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140665897	140666834	.	-	.	ID=comp158375_c1_seq1.mrna1;geneID=comp158375_c1_seq1.path1;Name=comp158375_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=930;mismatches=7;indels=2;unknowns=0;Target=comp158375_c1_seq1 938 1 .;CDS_Target=comp158375_c1_seq1 87 1 .;locus=RLOC_00022182
Chr2	stalkie_big_nohaplotig	exon	140665897	140666834	99	-	.	Parent=comp158375_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	140666748	140666834	.	-	0	Parent=comp158375_c1_seq1.mrna1
Chr2	gffcl	locus	140688992	140689374	.	-	.	ID=RLOC_00022183;geneIDs=FBgn0038643.1.path1;transcripts=FBgn0038643.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140688992	140689374	.	-	.	ID=FBgn0038643.1.mrna1;geneID=FBgn0038643.1.path1;Name=FBgn0038643.1;Dir=sensecoverage=93.8;identity=99.7;matches=317;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022183
Chr2	stalkie_big_nohaplotig	exon	140688992	140689257	99	-	.	Parent=FBgn0038643.1.mrna1;Target=FBgn0038643.1 74 339 +
Chr2	stalkie_big_nohaplotig	exon	140689323	140689374	100	-	.	Parent=FBgn0038643.1.mrna1;Target=FBgn0038643.1 22 73 +
Chr2	stalkie_big_nohaplotig	CDS	140688992	140689257	.	-	2	Parent=FBgn0038643.1.mrna1;Target=FBgn0038643.1 74 339 +
Chr2	stalkie_big_nohaplotig	CDS	140689323	140689374	.	-	0	Parent=FBgn0038643.1.mrna1;Target=FBgn0038643.1 22 73 +
Chr2	gffcl	locus	140693150	140693532	.	+	.	ID=RLOC_00022184;geneIDs=FBgn0085311.1.path1;transcripts=FBgn0085311.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140693150	140693532	.	+	.	ID=FBgn0085311.1.mrna1;geneID=FBgn0085311.1.path1;Name=FBgn0085311.1;Dir=sensecoverage=100.0;identity=100.0;matches=312;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022184
Chr2	stalkie_big_nohaplotig	exon	140693150	140693180	100	+	.	Parent=FBgn0085311.1.mrna1;Target=FBgn0085311.1 1 31 +
Chr2	stalkie_big_nohaplotig	exon	140693252	140693532	100	+	.	Parent=FBgn0085311.1.mrna1;Target=FBgn0085311.1 32 312 +
Chr2	stalkie_big_nohaplotig	CDS	140693150	140693180	.	+	0	Parent=FBgn0085311.1.mrna1;Target=FBgn0085311.1 1 31 +
Chr2	stalkie_big_nohaplotig	CDS	140693252	140693532	.	+	2	Parent=FBgn0085311.1.mrna1;Target=FBgn0085311.1 32 312 +
Chr2	gffcl	locus	140715730	140716292	.	-	.	ID=RLOC_00022185;geneIDs=comp149782_c0_seq1.path1;transcripts=comp149782_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140715730	140716292	.	-	.	ID=comp149782_c0_seq1.mrna1;geneID=comp149782_c0_seq1.path1;Name=comp149782_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=502;mismatches=0;indels=0;unknowns=0;Target=comp149782_c0_seq1 370 501 .;locus=RLOC_00022185
Chr2	stalkie_big_nohaplotig	exon	140715730	140715830	100	-	.	Parent=comp149782_c0_seq1.mrna1;Target=comp149782_c0_seq1 1 101 -
Chr2	stalkie_big_nohaplotig	exon	140715892	140716292	100	-	.	Parent=comp149782_c0_seq1.mrna1;Target=comp149782_c0_seq1 102 502 -
Chr2	stalkie_big_nohaplotig	CDS	140716160	140716291	.	-	0	Parent=comp149782_c0_seq1.mrna1
Chr2	gffcl	locus	140721754	140806642	.	+	.	ID=RLOC_00022186;geneIDs=FBgn0000303.1.path1;transcripts=FBgn0000303.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140721754	140806642	.	+	.	ID=FBgn0000303.1.mrna1;geneID=FBgn0000303.1.path1;Name=FBgn0000303.1;Dir=sensecoverage=100.0;identity=99.8;matches=2167;mismatches=4;indels=0;unknowns=16;locus=RLOC_00022186
Chr2	stalkie_big_nohaplotig	exon	140721754	140721964	100	+	.	Parent=FBgn0000303.1.mrna1;Target=FBgn0000303.1 1 211 +
Chr2	stalkie_big_nohaplotig	exon	140772924	140773003	100	+	.	Parent=FBgn0000303.1.mrna1;Target=FBgn0000303.1 212 291 +
Chr2	stalkie_big_nohaplotig	exon	140777042	140777233	100	+	.	Parent=FBgn0000303.1.mrna1;Target=FBgn0000303.1 292 483 +
Chr2	stalkie_big_nohaplotig	exon	140803449	140803621	100	+	.	Parent=FBgn0000303.1.mrna1;Target=FBgn0000303.1 484 656 +
Chr2	stalkie_big_nohaplotig	exon	140803687	140804493	99	+	.	Parent=FBgn0000303.1.mrna1;Target=FBgn0000303.1 657 1463 +
Chr2	stalkie_big_nohaplotig	exon	140804552	140804674	100	+	.	Parent=FBgn0000303.1.mrna1;Target=FBgn0000303.1 1464 1586 +
Chr2	stalkie_big_nohaplotig	exon	140805430	140805487	100	+	.	Parent=FBgn0000303.1.mrna1;Target=FBgn0000303.1 1587 1644 +
Chr2	stalkie_big_nohaplotig	exon	140805558	140805704	100	+	.	Parent=FBgn0000303.1.mrna1;Target=FBgn0000303.1 1645 1791 +
Chr2	stalkie_big_nohaplotig	exon	140805766	140805966	99	+	.	Parent=FBgn0000303.1.mrna1;Target=FBgn0000303.1 1792 1992 +
Chr2	stalkie_big_nohaplotig	exon	140806448	140806642	100	+	.	Parent=FBgn0000303.1.mrna1;Target=FBgn0000303.1 1993 2187 +
Chr2	stalkie_big_nohaplotig	CDS	140721754	140721964	.	+	0	Parent=FBgn0000303.1.mrna1;Target=FBgn0000303.1 1 211 +
Chr2	stalkie_big_nohaplotig	CDS	140772924	140773003	.	+	2	Parent=FBgn0000303.1.mrna1;Target=FBgn0000303.1 212 291 +
Chr2	stalkie_big_nohaplotig	CDS	140777042	140777233	.	+	0	Parent=FBgn0000303.1.mrna1;Target=FBgn0000303.1 292 483 +
Chr2	stalkie_big_nohaplotig	CDS	140803449	140803621	.	+	0	Parent=FBgn0000303.1.mrna1;Target=FBgn0000303.1 484 656 +
Chr2	stalkie_big_nohaplotig	CDS	140803687	140804493	.	+	1	Parent=FBgn0000303.1.mrna1;Target=FBgn0000303.1 657 1463 +
Chr2	stalkie_big_nohaplotig	CDS	140804552	140804674	.	+	1	Parent=FBgn0000303.1.mrna1;Target=FBgn0000303.1 1464 1586 +
Chr2	stalkie_big_nohaplotig	CDS	140805430	140805487	.	+	1	Parent=FBgn0000303.1.mrna1;Target=FBgn0000303.1 1587 1644 +
Chr2	stalkie_big_nohaplotig	CDS	140805558	140805704	.	+	0	Parent=FBgn0000303.1.mrna1;Target=FBgn0000303.1 1645 1791 +
Chr2	stalkie_big_nohaplotig	CDS	140805766	140805966	.	+	0	Parent=FBgn0000303.1.mrna1;Target=FBgn0000303.1 1792 1992 +
Chr2	stalkie_big_nohaplotig	CDS	140806448	140806642	.	+	0	Parent=FBgn0000303.1.mrna1;Target=FBgn0000303.1 1993 2187 +
Chr2	gffcl	locus	140740622	140742340	.	+	.	ID=RLOC_00022187;geneIDs=FBgn0015323.1.path1;transcripts=FBgn0015323.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140740622	140742340	.	+	.	ID=FBgn0015323.1.mrna1;geneID=FBgn0015323.1.path1;Name=FBgn0015323.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1710;mismatches=9;indels=0;unknowns=0;Target=FBgn0015323.1 1719 1 .;locus=RLOC_00022187
Chr2	stalkie_big_nohaplotig	exon	140740622	140742340	99	+	.	Parent=FBgn0015323.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	140740622	140742340	.	+	0	Parent=FBgn0015323.1.mrna1
Chr2	gffcl	locus	140743211	140743579	.	+	.	ID=RLOC_00022188;geneIDs=comp118546_c0_seq1.path1;transcripts=comp118546_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140743211	140743579	.	+	.	ID=comp118546_c0_seq1.mrna1;geneID=comp118546_c0_seq1.path1;Name=comp118546_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=368;mismatches=1;indels=0;unknowns=0;Target=comp118546_c0_seq1 369 1 .;CDS_Target=comp118546_c0_seq1 36 1 .;locus=RLOC_00022188
Chr2	stalkie_big_nohaplotig	exon	140743211	140743579	99	+	.	Parent=comp118546_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	140743211	140743246	.	+	0	Parent=comp118546_c0_seq1.mrna1
Chr2	gffcl	locus	140744764	140745164	.	-	.	ID=RLOC_00022189;geneIDs=comp91696_c0_seq1.path2;transcripts=comp91696_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	140744764	140745164	.	-	.	ID=comp91696_c0_seq1.mrna2;geneID=comp91696_c0_seq1.path2;Name=comp91696_c0_seq1;Dir=indeterminatecoverage=96.2;identity=99.5;matches=401;mismatches=0;indels=2;unknowns=0;Target=comp91696_c0_seq1 403 1 .;CDS_Target=comp91696_c0_seq1 210 67 .;locus=RLOC_00022189
Chr2	stalkie_big_nohaplotig	exon	140744764	140745164	99	-	.	Parent=comp91696_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	140744955	140745098	.	-	0	Parent=comp91696_c0_seq1.mrna2
Chr2	gffcl	locus	140746686	140746960	.	+	.	ID=RLOC_00022190;geneIDs=comp144836_c0_seq1.path1;transcripts=comp144836_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140746686	140746960	.	+	.	ID=comp144836_c0_seq1.mrna1;geneID=comp144836_c0_seq1.path1;Name=comp144836_c0_seq1;Dir=indeterminatecoverage=49.1;identity=98.6;matches=275;mismatches=0;indels=4;unknowns=0;Target=comp144836_c0_seq1 511 233 .;CDS_Target=comp144836_c0_seq1 506 441 .;locus=RLOC_00022190
Chr2	stalkie_big_nohaplotig	exon	140746686	140746960	98	+	.	Parent=comp144836_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	140746890	140746955	.	+	0	Parent=comp144836_c0_seq1.mrna1
Chr2	gffcl	locus	140747437	140748441	.	+	.	ID=RLOC_00022191;geneIDs=comp150116_c0_seq1.path2;transcripts=comp150116_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	140747437	140748441	.	+	.	ID=comp150116_c0_seq1.mrna2;geneID=comp150116_c0_seq1.path2;Name=comp150116_c0_seq1;Dir=indeterminatecoverage=90.8;identity=97.9;matches=991;mismatches=4;indels=17;unknowns=0;Target=comp150116_c0_seq1 1012 11 .;CDS_Target=comp150116_c0_seq1 44 12 .;locus=RLOC_00022191
Chr2	stalkie_big_nohaplotig	exon	140747437	140748441	97	+	.	Parent=comp150116_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	140747438	140747471	.	+	0	Parent=comp150116_c0_seq1.mrna2
Chr2	gffcl	locus	140778213	140786345	.	+	.	ID=RLOC_00022192;geneIDs=comp135982_c0_seq1.path1;transcripts=comp135982_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140778213	140786345	.	+	.	ID=comp135982_c0_seq1.mrna1;geneID=comp135982_c0_seq1.path1;Name=comp135982_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=470;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022192
Chr2	stalkie_big_nohaplotig	exon	140778213	140778647	99	+	.	Parent=comp135982_c0_seq1.mrna1;Target=comp135982_c0_seq1 39 473 -
Chr2	stalkie_big_nohaplotig	exon	140786308	140786345	100	+	.	Parent=comp135982_c0_seq1.mrna1;Target=comp135982_c0_seq1 1 38 -
Chr2	stalkie_big_nohaplotig	CDS	140778474	140778647	.	+	0	Parent=comp135982_c0_seq1.mrna1;Target=comp135982_c0_seq1 39 212 .
Chr2	stalkie_big_nohaplotig	CDS	140786308	140786343	.	+	0	Parent=comp135982_c0_seq1.mrna1;Target=comp135982_c0_seq1 3 38 .
Chr2	gffcl	locus	140786992	140789417	.	-	.	ID=RLOC_00022193;geneIDs=comp143254_c0_seq1.path1;transcripts=comp143254_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140786992	140789417	.	-	.	ID=comp143254_c0_seq1.mrna1;geneID=comp143254_c0_seq1.path1;Name=comp143254_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=1154;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022193
Chr2	stalkie_big_nohaplotig	exon	140786992	140787998	99	-	.	Parent=comp143254_c0_seq1.mrna1;Target=comp143254_c0_seq1 150 1156 +
Chr2	stalkie_big_nohaplotig	exon	140789269	140789417	100	-	.	Parent=comp143254_c0_seq1.mrna1;Target=comp143254_c0_seq1 1 149 +
Chr2	stalkie_big_nohaplotig	CDS	140787388	140787998	.	-	2	Parent=comp143254_c0_seq1.mrna1;Target=comp143254_c0_seq1 150 760 +
Chr2	stalkie_big_nohaplotig	CDS	140789269	140789278	.	-	0	Parent=comp143254_c0_seq1.mrna1;Target=comp143254_c0_seq1 140 149 +
Chr2	gffcl	locus	140792894	140793549	.	-	.	ID=RLOC_00022194;geneIDs=comp148916_c0_seq1.path1;transcripts=comp148916_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140792894	140793549	.	-	.	ID=comp148916_c0_seq1.mrna1;geneID=comp148916_c0_seq1.path1;Name=comp148916_c0_seq1;Dir=antisensecoverage=96.7;identity=99.6;matches=530;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022194
Chr2	stalkie_big_nohaplotig	exon	140792894	140793280	99	-	.	Parent=comp148916_c0_seq1.mrna1;Target=comp148916_c0_seq1 15 401 -
Chr2	stalkie_big_nohaplotig	exon	140793405	140793549	99	-	.	Parent=comp148916_c0_seq1.mrna1;Target=comp148916_c0_seq1 402 546 -
Chr2	stalkie_big_nohaplotig	CDS	140793119	140793280	.	-	0	Parent=comp148916_c0_seq1.mrna1;Target=comp148916_c0_seq1 240 401 .
Chr2	stalkie_big_nohaplotig	CDS	140793405	140793548	.	-	0	Parent=comp148916_c0_seq1.mrna1;Target=comp148916_c0_seq1 402 545 .
Chr2	gffcl	locus	140797269	140798229	.	-	.	ID=RLOC_00022195;geneIDs=FBgn0038646.1.path1;transcripts=FBgn0038646.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140797269	140798229	.	-	.	ID=FBgn0038646.1.mrna1;geneID=FBgn0038646.1.path1;Name=FBgn0038646.1;Dir=sensecoverage=100.0;identity=100.0;matches=900;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022195
Chr2	stalkie_big_nohaplotig	exon	140797269	140798059	100	-	.	Parent=FBgn0038646.1.mrna1;Target=FBgn0038646.1 110 900 +
Chr2	stalkie_big_nohaplotig	exon	140798121	140798229	100	-	.	Parent=FBgn0038646.1.mrna1;Target=FBgn0038646.1 1 109 +
Chr2	stalkie_big_nohaplotig	CDS	140797269	140798059	.	-	2	Parent=FBgn0038646.1.mrna1;Target=FBgn0038646.1 110 900 +
Chr2	stalkie_big_nohaplotig	CDS	140798121	140798229	.	-	0	Parent=FBgn0038646.1.mrna1;Target=FBgn0038646.1 1 109 +
Chr2	gffcl	locus	140807098	140807455	.	+	.	ID=RLOC_00022196;geneIDs=comp149324_c0_seq1.path1;transcripts=comp149324_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140807098	140807455	.	+	.	ID=comp149324_c0_seq1.mrna1;geneID=comp149324_c0_seq1.path1;Name=comp149324_c0_seq1;Dir=indeterminatecoverage=97.8;identity=98.3;matches=354;mismatches=4;indels=2;unknowns=0;Target=comp149324_c0_seq1 360 1 .;CDS_Target=comp149324_c0_seq1 270 202 .;locus=RLOC_00022196
Chr2	stalkie_big_nohaplotig	exon	140807098	140807455	98	+	.	Parent=comp149324_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	140807299	140807367	.	+	0	Parent=comp149324_c0_seq1.mrna1
Chr2	gffcl	locus	140807475	140807794	.	-	.	ID=RLOC_00022197;geneIDs=comp134147_c0_seq1.path1;transcripts=comp134147_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140807475	140807794	.	-	.	ID=comp134147_c0_seq1.mrna1;geneID=comp134147_c0_seq1.path1;Name=comp134147_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=319;mismatches=1;indels=3;unknowns=0;Target=comp134147_c0_seq1 323 1 .;CDS_Target=comp134147_c0_seq1 65 3 .;locus=RLOC_00022197
Chr2	stalkie_big_nohaplotig	exon	140807475	140807794	98	-	.	Parent=comp134147_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	140807730	140807792	.	-	0	Parent=comp134147_c0_seq1.mrna1
Chr2	gffcl	locus	140809010	140809355	.	+	.	ID=RLOC_00022198;geneIDs=comp162641_c0_seq1.path1;transcripts=comp162641_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140809010	140809355	.	+	.	ID=comp162641_c0_seq1.mrna1;geneID=comp162641_c0_seq1.path1;Name=comp162641_c0_seq1;Dir=indeterminatecoverage=85.5;identity=97.4;matches=339;mismatches=7;indels=2;unknowns=0;Target=comp162641_c0_seq1 407 60 .;CDS_Target=comp162641_c0_seq1 84 61 .;locus=RLOC_00022198
Chr2	stalkie_big_nohaplotig	exon	140809010	140809355	97	+	.	Parent=comp162641_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	140809011	140809034	.	+	0	Parent=comp162641_c0_seq1.mrna1
Chr2	gffcl	locus	140813998	140814621	.	+	.	ID=RLOC_00022199;geneIDs=comp165799_c0_seq1.path1;transcripts=comp165799_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140813998	140814621	.	+	.	ID=comp165799_c0_seq1.mrna1;geneID=comp165799_c0_seq1.path1;Name=comp165799_c0_seq1;Dir=sensecoverage=99.0;identity=100.0;matches=506;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022199
Chr2	stalkie_big_nohaplotig	exon	140813998	140814166	100	+	.	Parent=comp165799_c0_seq1.mrna1;Target=comp165799_c0_seq1 1 169 +
Chr2	stalkie_big_nohaplotig	exon	140814285	140814621	100	+	.	Parent=comp165799_c0_seq1.mrna1;Target=comp165799_c0_seq1 170 506 +
Chr2	stalkie_big_nohaplotig	CDS	140814160	140814166	.	+	0	Parent=comp165799_c0_seq1.mrna1;Target=comp165799_c0_seq1 163 169 +
Chr2	stalkie_big_nohaplotig	CDS	140814285	140814514	.	+	2	Parent=comp165799_c0_seq1.mrna1;Target=comp165799_c0_seq1 170 399 +
Chr2	gffcl	locus	140816914	140827523	.	-	.	ID=RLOC_00022200;geneIDs=FBgn0024329.1.path1;transcripts=FBgn0024329.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140816914	140827523	.	-	.	ID=FBgn0024329.1.mrna1;geneID=FBgn0024329.1.path1;Name=FBgn0024329.1;Dir=sensecoverage=100.0;identity=99.6;matches=4427;mismatches=16;indels=0;unknowns=0;locus=RLOC_00022200
Chr2	stalkie_big_nohaplotig	exon	140816914	140816994	100	-	.	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 4363 4443 +
Chr2	stalkie_big_nohaplotig	exon	140817059	140817238	100	-	.	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 4183 4362 +
Chr2	stalkie_big_nohaplotig	exon	140817299	140817405	100	-	.	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 4076 4182 +
Chr2	stalkie_big_nohaplotig	exon	140817468	140817756	100	-	.	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 3787 4075 +
Chr2	stalkie_big_nohaplotig	exon	140817821	140818012	100	-	.	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 3595 3786 +
Chr2	stalkie_big_nohaplotig	exon	140818100	140819533	99	-	.	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 2161 3594 +
Chr2	stalkie_big_nohaplotig	exon	140819591	140820119	99	-	.	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 1632 2160 +
Chr2	stalkie_big_nohaplotig	exon	140820182	140820322	100	-	.	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 1491 1631 +
Chr2	stalkie_big_nohaplotig	exon	140820379	140820609	100	-	.	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 1260 1490 +
Chr2	stalkie_big_nohaplotig	exon	140820681	140820954	99	-	.	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 986 1259 +
Chr2	stalkie_big_nohaplotig	exon	140821026	140821263	98	-	.	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 748 985 +
Chr2	stalkie_big_nohaplotig	exon	140821388	140821895	99	-	.	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 240 747 +
Chr2	stalkie_big_nohaplotig	exon	140821959	140822171	99	-	.	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 27 239 +
Chr2	stalkie_big_nohaplotig	exon	140827498	140827523	100	-	.	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 1 26 +
Chr2	stalkie_big_nohaplotig	CDS	140816914	140816994	.	-	0	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 4363 4443 +
Chr2	stalkie_big_nohaplotig	CDS	140817059	140817238	.	-	0	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 4183 4362 +
Chr2	stalkie_big_nohaplotig	CDS	140817299	140817405	.	-	2	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 4076 4182 +
Chr2	stalkie_big_nohaplotig	CDS	140817468	140817756	.	-	0	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 3787 4075 +
Chr2	stalkie_big_nohaplotig	CDS	140817821	140818012	.	-	0	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 3595 3786 +
Chr2	stalkie_big_nohaplotig	CDS	140818100	140819533	.	-	0	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 2161 3594 +
Chr2	stalkie_big_nohaplotig	CDS	140819591	140820119	.	-	1	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 1632 2160 +
Chr2	stalkie_big_nohaplotig	CDS	140820182	140820322	.	-	1	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 1491 1631 +
Chr2	stalkie_big_nohaplotig	CDS	140820379	140820609	.	-	1	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 1260 1490 +
Chr2	stalkie_big_nohaplotig	CDS	140820681	140820954	.	-	2	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 986 1259 +
Chr2	stalkie_big_nohaplotig	CDS	140821026	140821263	.	-	0	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 748 985 +
Chr2	stalkie_big_nohaplotig	CDS	140821388	140821895	.	-	1	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 240 747 +
Chr2	stalkie_big_nohaplotig	CDS	140821959	140822171	.	-	1	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 27 239 +
Chr2	stalkie_big_nohaplotig	CDS	140827498	140827523	.	-	0	Parent=FBgn0024329.1.mrna1;Target=FBgn0024329.1 1 26 +
Chr2	gffcl	locus	140827695	140828348	.	-	.	ID=RLOC_00022201;geneIDs=comp129375_c0_seq1.path1;transcripts=comp129375_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140827695	140828348	.	-	.	ID=comp129375_c0_seq1.mrna1;geneID=comp129375_c0_seq1.path1;Name=comp129375_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.7;matches=652;mismatches=1;indels=1;unknowns=0;Target=comp129375_c0_seq1 659 7 .;CDS_Target=comp129375_c0_seq1 549 451 .;locus=RLOC_00022201
Chr2	stalkie_big_nohaplotig	exon	140827695	140828348	99	-	.	Parent=comp129375_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	140827806	140827904	.	-	0	Parent=comp129375_c0_seq1.mrna1
Chr2	gffcl	locus	140840005	140840435	.	-	.	ID=RLOC_00022202;geneIDs=comp119270_c0_seq1.path1;transcripts=comp119270_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140840005	140840435	.	-	.	ID=comp119270_c0_seq1.mrna1;geneID=comp119270_c0_seq1.path1;Name=comp119270_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=431;mismatches=0;indels=0;unknowns=0;Target=comp119270_c0_seq1 431 1 .;CDS_Target=comp119270_c0_seq1 211 173 .;locus=RLOC_00022202
Chr2	stalkie_big_nohaplotig	exon	140840005	140840435	100	-	.	Parent=comp119270_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	140840225	140840263	.	-	0	Parent=comp119270_c0_seq1.mrna1
Chr2	gffcl	locus	140844365	140854401	.	+	.	ID=RLOC_00022203;geneIDs=FBgn0003267.1.path1;transcripts=FBgn0003267.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140844365	140854401	.	+	.	ID=FBgn0003267.1.mrna1;geneID=FBgn0003267.1.path1;Name=FBgn0003267.1;Dir=sensecoverage=100.0;identity=99.1;matches=1052;mismatches=4;indels=6;unknowns=0;locus=RLOC_00022203
Chr2	stalkie_big_nohaplotig	exon	140844365	140844696	100	+	.	Parent=FBgn0003267.1.mrna1;Target=FBgn0003267.1 1 332 +
Chr2	stalkie_big_nohaplotig	exon	140844774	140844913	99	+	.	Parent=FBgn0003267.1.mrna1;Target=FBgn0003267.1 333 472 +
Chr2	stalkie_big_nohaplotig	exon	140851950	140852184	99	+	.	Parent=FBgn0003267.1.mrna1;Target=FBgn0003267.1 473 707 +
Chr2	stalkie_big_nohaplotig	exon	140854047	140854401	97	+	.	Parent=FBgn0003267.1.mrna1;Target=FBgn0003267.1 708 1056 +
Chr2	stalkie_big_nohaplotig	CDS	140844365	140844696	.	+	0	Parent=FBgn0003267.1.mrna1;Target=FBgn0003267.1 1 332 +
Chr2	stalkie_big_nohaplotig	CDS	140844774	140844913	.	+	1	Parent=FBgn0003267.1.mrna1;Target=FBgn0003267.1 333 472 +
Chr2	stalkie_big_nohaplotig	CDS	140851950	140852184	.	+	2	Parent=FBgn0003267.1.mrna1;Target=FBgn0003267.1 473 707 +
Chr2	stalkie_big_nohaplotig	CDS	140854047	140854401	.	+	1	Parent=FBgn0003267.1.mrna1;Target=FBgn0003267.1 708 1056 +
Chr2	gffcl	locus	140847110	140856374	.	-	.	ID=RLOC_00022204;geneIDs=FBgn0039461.1.path1,comp155892_c0_seq1.path1;transcripts=FBgn0039461.1.mrna1,comp155892_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140847110	140856374	.	-	.	ID=FBgn0039461.1.mrna1;geneID=FBgn0039461.1.path1;Name=FBgn0039461.1;Dir=sensecoverage=100.0;identity=99.8;matches=425;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022204
Chr2	stalkie_big_nohaplotig	exon	140847110	140847331	99	-	.	Parent=FBgn0039461.1.mrna1;Target=FBgn0039461.1 205 426 +
Chr2	stalkie_big_nohaplotig	exon	140848676	140848791	100	-	.	Parent=FBgn0039461.1.mrna1;Target=FBgn0039461.1 89 204 +
Chr2	stalkie_big_nohaplotig	exon	140856287	140856374	100	-	.	Parent=FBgn0039461.1.mrna1;Target=FBgn0039461.1 1 88 +
Chr2	stalkie_big_nohaplotig	CDS	140847110	140847331	.	-	0	Parent=FBgn0039461.1.mrna1;Target=FBgn0039461.1 205 426 +
Chr2	stalkie_big_nohaplotig	CDS	140848676	140848791	.	-	2	Parent=FBgn0039461.1.mrna1;Target=FBgn0039461.1 89 204 +
Chr2	stalkie_big_nohaplotig	CDS	140856287	140856374	.	-	0	Parent=FBgn0039461.1.mrna1;Target=FBgn0039461.1 1 88 +
Chr2	stalkie_big_nohaplotig	mRNA	140847675	140848699	.	-	.	ID=comp155892_c0_seq1.mrna1;geneID=comp155892_c0_seq1.path1;Name=comp155892_c0_seq1;Dir=indeterminatecoverage=99.8;identity=80.3;matches=828;mismatches=96;indels=107;unknowns=0;Target=comp155892_c0_seq1 444 427 .;locus=RLOC_00022204
Chr2	stalkie_big_nohaplotig	exon	140847675	140848098	78	-	.	Parent=comp155892_c0_seq1.mrna1;Target=comp155892_c0_seq1 1041 585 .
Chr2	stalkie_big_nohaplotig	exon	140848172	140848699	81	-	.	Parent=comp155892_c0_seq1.mrna1;Target=comp155892_c0_seq1 546 1 .
Chr2	stalkie_big_nohaplotig	CDS	140848274	140848292	.	-	0	Parent=comp155892_c0_seq1.mrna1
Chr2	gffcl	locus	140863012	140864046	.	-	.	ID=RLOC_00022206;geneIDs=comp142890_c0_seq1.path1;transcripts=comp142890_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140863012	140864046	.	-	.	ID=comp142890_c0_seq1.mrna1;geneID=comp142890_c0_seq1.path1;Name=comp142890_c0_seq1;Dir=indeterminatecoverage=99.4;identity=99.7;matches=1034;mismatches=1;indels=2;unknowns=0;Target=comp142890_c0_seq1 1037 1 .;CDS_Target=comp142890_c0_seq1 922 869 .;locus=RLOC_00022206
Chr2	stalkie_big_nohaplotig	exon	140863012	140864046	99	-	.	Parent=comp142890_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	140863127	140863180	.	-	0	Parent=comp142890_c0_seq1.mrna1
Chr2	gffcl	locus	140865252	140884634	.	-	.	ID=RLOC_00022207;geneIDs=AAEL017220.4.path1,comp161218_c4_seq1.path1;transcripts=comp161218_c4_seq1.mrna1,AAEL017220.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140865252	140868364	.	-	.	ID=comp161218_c4_seq1.mrna1;geneID=comp161218_c4_seq1.path1;Name=comp161218_c4_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=2625;mismatches=6;indels=9;unknowns=0;locus=RLOC_00022207
Chr2	stalkie_big_nohaplotig	exon	140865252	140865688	100	-	.	Parent=comp161218_c4_seq1.mrna1;Target=comp161218_c4_seq1 2641 2205 .
Chr2	stalkie_big_nohaplotig	exon	140865749	140865908	100	-	.	Parent=comp161218_c4_seq1.mrna1;Target=comp161218_c4_seq1 2204 2045 .
Chr2	stalkie_big_nohaplotig	exon	140866141	140866207	100	-	.	Parent=comp161218_c4_seq1.mrna1;Target=comp161218_c4_seq1 2044 1978 .
Chr2	stalkie_big_nohaplotig	exon	140866273	140867309	100	-	.	Parent=comp161218_c4_seq1.mrna1;Target=comp161218_c4_seq1 1977 941 .
Chr2	stalkie_big_nohaplotig	exon	140867376	140868007	99	-	.	Parent=comp161218_c4_seq1.mrna1;Target=comp161218_c4_seq1 940 308 .
Chr2	stalkie_big_nohaplotig	exon	140868067	140868364	97	-	.	Parent=comp161218_c4_seq1.mrna1;Target=comp161218_c4_seq1 307 2 .
Chr2	stalkie_big_nohaplotig	CDS	140866647	140867309	.	-	0	Parent=comp161218_c4_seq1.mrna1;Target=comp161218_c4_seq1 1603 941 .
Chr2	stalkie_big_nohaplotig	CDS	140867376	140867651	.	-	0	Parent=comp161218_c4_seq1.mrna1;Target=comp161218_c4_seq1 940 665 .
Chr2	stalkie_big_nohaplotig	mRNA	140866650	140884634	.	-	.	ID=AAEL017220.4.mrna1;geneID=AAEL017220.4.path1;Name=AAEL017220.4;Dir=sensecoverage=100.0;identity=100.0;matches=1239;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022207
Chr2	stalkie_big_nohaplotig	exon	140866650	140867309	100	-	.	Parent=AAEL017220.4.mrna1;Target=AAEL017220.4 580 1239 +
Chr2	stalkie_big_nohaplotig	exon	140867376	140867631	100	-	.	Parent=AAEL017220.4.mrna1;Target=AAEL017220.4 324 579 +
Chr2	stalkie_big_nohaplotig	exon	140867841	140868007	100	-	.	Parent=AAEL017220.4.mrna1;Target=AAEL017220.4 157 323 +
Chr2	stalkie_big_nohaplotig	exon	140884479	140884634	100	-	.	Parent=AAEL017220.4.mrna1;Target=AAEL017220.4 1 156 +
Chr2	stalkie_big_nohaplotig	CDS	140866650	140867309	.	-	0	Parent=AAEL017220.4.mrna1;Target=AAEL017220.4 580 1239 +
Chr2	stalkie_big_nohaplotig	CDS	140867376	140867631	.	-	1	Parent=AAEL017220.4.mrna1;Target=AAEL017220.4 324 579 +
Chr2	stalkie_big_nohaplotig	CDS	140867841	140868007	.	-	0	Parent=AAEL017220.4.mrna1;Target=AAEL017220.4 157 323 +
Chr2	stalkie_big_nohaplotig	CDS	140884479	140884634	.	-	0	Parent=AAEL017220.4.mrna1;Target=AAEL017220.4 1 156 +
Chr2	gffcl	locus	140888948	140896006	.	+	.	ID=RLOC_00022208;geneIDs=FBgn0026562.1.path1;transcripts=FBgn0026562.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140888948	140896006	.	+	.	ID=FBgn0026562.1.mrna1;geneID=FBgn0026562.1.path1;Name=FBgn0026562.1;Dir=sensecoverage=100.0;identity=98.8;matches=925;mismatches=11;indels=0;unknowns=0;locus=RLOC_00022208
Chr2	stalkie_big_nohaplotig	exon	140888948	140888960	100	+	.	Parent=FBgn0026562.1.mrna1;Target=FBgn0026562.1 1 13 +
Chr2	stalkie_big_nohaplotig	exon	140894201	140894361	98	+	.	Parent=FBgn0026562.1.mrna1;Target=FBgn0026562.1 14 174 +
Chr2	stalkie_big_nohaplotig	exon	140894761	140894854	97	+	.	Parent=FBgn0026562.1.mrna1;Target=FBgn0026562.1 175 268 +
Chr2	stalkie_big_nohaplotig	exon	140895201	140895463	98	+	.	Parent=FBgn0026562.1.mrna1;Target=FBgn0026562.1 269 531 +
Chr2	stalkie_big_nohaplotig	exon	140895537	140895884	99	+	.	Parent=FBgn0026562.1.mrna1;Target=FBgn0026562.1 532 879 +
Chr2	stalkie_big_nohaplotig	exon	140895950	140896006	100	+	.	Parent=FBgn0026562.1.mrna1;Target=FBgn0026562.1 880 936 +
Chr2	stalkie_big_nohaplotig	CDS	140888948	140888960	.	+	0	Parent=FBgn0026562.1.mrna1;Target=FBgn0026562.1 1 13 +
Chr2	stalkie_big_nohaplotig	CDS	140894201	140894361	.	+	2	Parent=FBgn0026562.1.mrna1;Target=FBgn0026562.1 14 174 +
Chr2	stalkie_big_nohaplotig	CDS	140894761	140894854	.	+	0	Parent=FBgn0026562.1.mrna1;Target=FBgn0026562.1 175 268 +
Chr2	stalkie_big_nohaplotig	CDS	140895201	140895463	.	+	2	Parent=FBgn0026562.1.mrna1;Target=FBgn0026562.1 269 531 +
Chr2	stalkie_big_nohaplotig	CDS	140895537	140895884	.	+	0	Parent=FBgn0026562.1.mrna1;Target=FBgn0026562.1 532 879 +
Chr2	stalkie_big_nohaplotig	CDS	140895950	140896006	.	+	0	Parent=FBgn0026562.1.mrna1;Target=FBgn0026562.1 880 936 +
Chr2	gffcl	locus	140898957	140901470	.	-	.	ID=RLOC_00022209;geneIDs=FBgn0001197.1.path1;transcripts=FBgn0001197.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140898957	140901470	.	-	.	ID=FBgn0001197.1.mrna1;geneID=FBgn0001197.1.path1;Name=FBgn0001197.1;Dir=sensecoverage=100.0;identity=100.0;matches=441;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022209
Chr2	stalkie_big_nohaplotig	exon	140898957	140899013	100	-	.	Parent=FBgn0001197.1.mrna1;Target=FBgn0001197.1 385 441 +
Chr2	stalkie_big_nohaplotig	exon	140899084	140899254	100	-	.	Parent=FBgn0001197.1.mrna1;Target=FBgn0001197.1 214 384 +
Chr2	stalkie_big_nohaplotig	exon	140900835	140900948	100	-	.	Parent=FBgn0001197.1.mrna1;Target=FBgn0001197.1 100 213 +
Chr2	stalkie_big_nohaplotig	exon	140901066	140901143	100	-	.	Parent=FBgn0001197.1.mrna1;Target=FBgn0001197.1 22 99 +
Chr2	stalkie_big_nohaplotig	exon	140901450	140901470	100	-	.	Parent=FBgn0001197.1.mrna1;Target=FBgn0001197.1 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	140898957	140899013	.	-	0	Parent=FBgn0001197.1.mrna1;Target=FBgn0001197.1 385 441 +
Chr2	stalkie_big_nohaplotig	CDS	140899084	140899254	.	-	0	Parent=FBgn0001197.1.mrna1;Target=FBgn0001197.1 214 384 +
Chr2	stalkie_big_nohaplotig	CDS	140900835	140900948	.	-	0	Parent=FBgn0001197.1.mrna1;Target=FBgn0001197.1 100 213 +
Chr2	stalkie_big_nohaplotig	CDS	140901066	140901143	.	-	0	Parent=FBgn0001197.1.mrna1;Target=FBgn0001197.1 22 99 +
Chr2	stalkie_big_nohaplotig	CDS	140901450	140901470	.	-	0	Parent=FBgn0001197.1.mrna1;Target=FBgn0001197.1 1 21 +
Chr2	gffcl	locus	140899526	140899943	.	+	.	ID=RLOC_00022210;geneIDs=comp136762_c1_seq1.path1;transcripts=comp136762_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140899526	140899943	.	+	.	ID=comp136762_c1_seq1.mrna1;geneID=comp136762_c1_seq1.path1;Name=comp136762_c1_seq1;Dir=indeterminatecoverage=97.7;identity=98.8;matches=414;mismatches=4;indels=1;unknowns=0;Target=comp136762_c1_seq1 419 1 .;CDS_Target=comp136762_c1_seq1 302 168 .;locus=RLOC_00022210
Chr2	stalkie_big_nohaplotig	exon	140899526	140899943	98	+	.	Parent=comp136762_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	140899692	140899826	.	+	0	Parent=comp136762_c1_seq1.mrna1
Chr2	gffcl	locus	140916281	140954740	.	+	.	ID=RLOC_00022212;geneIDs=FBgn0051072.1.path1;transcripts=FBgn0051072.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140916281	140954740	.	+	.	ID=FBgn0051072.1.mrna1;geneID=FBgn0051072.1.path1;Name=FBgn0051072.1;Dir=sensecoverage=88.6;identity=99.6;matches=2335;mismatches=8;indels=1;unknowns=0;locus=RLOC_00022212
Chr2	stalkie_big_nohaplotig	exon	140916281	140916494	99	+	.	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 1 213 +
Chr2	stalkie_big_nohaplotig	exon	140920713	140920923	100	+	.	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 214 424 +
Chr2	stalkie_big_nohaplotig	exon	140921020	140921174	100	+	.	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 425 579 +
Chr2	stalkie_big_nohaplotig	exon	140921368	140921519	98	+	.	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 580 731 +
Chr2	stalkie_big_nohaplotig	exon	140921576	140921707	100	+	.	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 732 863 +
Chr2	stalkie_big_nohaplotig	exon	140921764	140921905	100	+	.	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 864 1005 +
Chr2	stalkie_big_nohaplotig	exon	140921975	140922090	100	+	.	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 1006 1121 +
Chr2	stalkie_big_nohaplotig	exon	140922179	140922288	99	+	.	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 1122 1231 +
Chr2	stalkie_big_nohaplotig	exon	140933371	140933852	100	+	.	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 1232 1713 +
Chr2	stalkie_big_nohaplotig	exon	140934066	140934179	100	+	.	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 1714 1827 +
Chr2	stalkie_big_nohaplotig	exon	140946611	140946757	100	+	.	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 1828 1974 +
Chr2	stalkie_big_nohaplotig	exon	140950648	140950827	97	+	.	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 1975 2154 +
Chr2	stalkie_big_nohaplotig	exon	140950892	140951012	100	+	.	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 2155 2275 +
Chr2	stalkie_big_nohaplotig	exon	140954673	140954740	100	+	.	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 2276 2343 +
Chr2	stalkie_big_nohaplotig	CDS	140916399	140916494	.	+	0	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 118 213 +
Chr2	stalkie_big_nohaplotig	CDS	140920713	140920923	.	+	0	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 214 424 +
Chr2	stalkie_big_nohaplotig	CDS	140921020	140921174	.	+	2	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 425 579 +
Chr2	stalkie_big_nohaplotig	CDS	140921368	140921519	.	+	0	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 580 731 +
Chr2	stalkie_big_nohaplotig	CDS	140921576	140921707	.	+	1	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 732 863 +
Chr2	stalkie_big_nohaplotig	CDS	140921764	140921905	.	+	1	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 864 1005 +
Chr2	stalkie_big_nohaplotig	CDS	140921975	140922090	.	+	0	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 1006 1121 +
Chr2	stalkie_big_nohaplotig	CDS	140922179	140922288	.	+	1	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 1122 1231 +
Chr2	stalkie_big_nohaplotig	CDS	140933371	140933852	.	+	2	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 1232 1713 +
Chr2	stalkie_big_nohaplotig	CDS	140934066	140934179	.	+	0	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 1714 1827 +
Chr2	stalkie_big_nohaplotig	CDS	140946611	140946757	.	+	0	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 1828 1974 +
Chr2	stalkie_big_nohaplotig	CDS	140950648	140950827	.	+	0	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 1975 2154 +
Chr2	stalkie_big_nohaplotig	CDS	140950892	140951012	.	+	0	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 2155 2275 +
Chr2	stalkie_big_nohaplotig	CDS	140954673	140954740	.	+	2	Parent=FBgn0051072.1.mrna1;Target=FBgn0051072.1 2276 2343 +
Chr2	gffcl	locus	140929337	140929996	.	+	.	ID=RLOC_00022213;geneIDs=FBgn0032248.1.path1;transcripts=FBgn0032248.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	140929337	140929996	.	+	.	ID=FBgn0032248.1.mrna1;geneID=FBgn0032248.1.path1;Name=FBgn0032248.1;Dir=sensecoverage=100.0;identity=99.3;matches=599;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022213
Chr2	stalkie_big_nohaplotig	exon	140929337	140929624	99	+	.	Parent=FBgn0032248.1.mrna1;Target=FBgn0032248.1 1 288 +
Chr2	stalkie_big_nohaplotig	exon	140929682	140929996	99	+	.	Parent=FBgn0032248.1.mrna1;Target=FBgn0032248.1 289 603 +
Chr2	stalkie_big_nohaplotig	CDS	140929337	140929624	.	+	0	Parent=FBgn0032248.1.mrna1;Target=FBgn0032248.1 1 288 +
Chr2	stalkie_big_nohaplotig	CDS	140929682	140929996	.	+	0	Parent=FBgn0032248.1.mrna1;Target=FBgn0032248.1 289 603 +
Chr2	gffcl	locus	141020485	141021468	.	-	.	ID=RLOC_00022214;geneIDs=FBgn0051072.1.path2;transcripts=FBgn0051072.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	141020485	141021468	.	-	.	ID=FBgn0051072.1.mrna2;geneID=FBgn0051072.1.path2;Name=FBgn0051072.1;Dir=sensecoverage=11.4;identity=100.0;matches=300;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022214
Chr2	stalkie_big_nohaplotig	exon	141020485	141020600	100	-	.	Parent=FBgn0051072.1.mrna2;Target=FBgn0051072.1 2528 2643 +
Chr2	stalkie_big_nohaplotig	exon	141021285	141021468	100	-	.	Parent=FBgn0051072.1.mrna2;Target=FBgn0051072.1 2344 2527 +
Chr2	stalkie_big_nohaplotig	CDS	141020485	141020600	.	-	2	Parent=FBgn0051072.1.mrna2;Target=FBgn0051072.1 2528 2643 +
Chr2	stalkie_big_nohaplotig	CDS	141021285	141021468	.	-	0	Parent=FBgn0051072.1.mrna2;Target=FBgn0051072.1 2344 2527 +
Chr2	gffcl	locus	141039681	141043206	.	+	.	ID=RLOC_00022215;geneIDs=FBgn0262473.1.path1;transcripts=FBgn0262473.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141039681	141043206	.	+	.	ID=FBgn0262473.1.mrna1;geneID=FBgn0262473.1.path1;Name=FBgn0262473.1;Dir=sensecoverage=100.0;identity=99.4;matches=3344;mismatches=19;indels=0;unknowns=0;locus=RLOC_00022215
Chr2	stalkie_big_nohaplotig	exon	141039681	141040996	99	+	.	Parent=FBgn0262473.1.mrna1;Target=FBgn0262473.1 1 1316 +
Chr2	stalkie_big_nohaplotig	exon	141041160	141043206	99	+	.	Parent=FBgn0262473.1.mrna1;Target=FBgn0262473.1 1317 3363 +
Chr2	stalkie_big_nohaplotig	CDS	141039681	141040996	.	+	0	Parent=FBgn0262473.1.mrna1;Target=FBgn0262473.1 1 1316 +
Chr2	stalkie_big_nohaplotig	CDS	141041160	141043206	.	+	1	Parent=FBgn0262473.1.mrna1;Target=FBgn0262473.1 1317 3363 +
Chr2	gffcl	locus	141044358	141044904	.	+	.	ID=RLOC_00022216;geneIDs=comp144946_c1_seq1.path1;transcripts=comp144946_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141044358	141044904	.	+	.	ID=comp144946_c1_seq1.mrna1;geneID=comp144946_c1_seq1.path1;Name=comp144946_c1_seq1;Dir=indeterminatecoverage=94.5;identity=98.9;matches=543;mismatches=4;indels=2;unknowns=0;Target=comp144946_c1_seq1 581 33 .;CDS_Target=comp144946_c1_seq1 69 34 .;locus=RLOC_00022216
Chr2	stalkie_big_nohaplotig	exon	141044358	141044904	98	+	.	Parent=comp144946_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	141044359	141044394	.	+	0	Parent=comp144946_c1_seq1.mrna1
Chr2	gffcl	locus	141049575	141050246	.	+	.	ID=RLOC_00022217;geneIDs=FBgn0032248.3.path1;transcripts=FBgn0032248.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141049575	141050246	.	+	.	ID=FBgn0032248.3.mrna1;geneID=FBgn0032248.3.path1;Name=FBgn0032248.3;Dir=sensecoverage=100.0;identity=99.7;matches=620;mismatches=1;indels=1;unknowns=0;Target=FBgn0032248.3 2 49 +;locus=RLOC_00022217
Chr2	stalkie_big_nohaplotig	exon	141049575	141049902	99	+	.	Parent=FBgn0032248.3.mrna1;Target=FBgn0032248.3 1 327 +
Chr2	stalkie_big_nohaplotig	exon	141049953	141050246	100	+	.	Parent=FBgn0032248.3.mrna1;Target=FBgn0032248.3 328 621 +
Chr2	stalkie_big_nohaplotig	CDS	141049576	141049624	.	+	0	Parent=FBgn0032248.3.mrna1
Chr2	gffcl	locus	141103240	141104705	.	-	.	ID=RLOC_00022219;geneIDs=comp159772_c0_seq1.path1;transcripts=comp159772_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141103240	141104705	.	-	.	ID=comp159772_c0_seq1.mrna1;geneID=comp159772_c0_seq1.path1;Name=comp159772_c0_seq1;Dir=sensecoverage=99.3;identity=95.5;matches=1131;mismatches=39;indels=14;unknowns=0;Target=comp159772_c0_seq1 108 590 +;locus=RLOC_00022219
Chr2	stalkie_big_nohaplotig	exon	141103240	141103478	100	-	.	Parent=comp159772_c0_seq1.mrna1;Target=comp159772_c0_seq1 954 1192 +
Chr2	stalkie_big_nohaplotig	exon	141103546	141103663	81	-	.	Parent=comp159772_c0_seq1.mrna1;Target=comp159772_c0_seq1 824 953 +
Chr2	stalkie_big_nohaplotig	exon	141103779	141103940	89	-	.	Parent=comp159772_c0_seq1.mrna1;Target=comp159772_c0_seq1 662 823 +
Chr2	stalkie_big_nohaplotig	exon	141104054	141104705	98	-	.	Parent=comp159772_c0_seq1.mrna1;Target=comp159772_c0_seq1 9 660 +
Chr2	stalkie_big_nohaplotig	CDS	141104124	141104606	.	-	0	Parent=comp159772_c0_seq1.mrna1
Chr2	gffcl	locus	141206298	141208445	.	+	.	ID=RLOC_00022220;geneIDs=FBgn0031853.12.path1;transcripts=FBgn0031853.12.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141206298	141208445	.	+	.	ID=FBgn0031853.12.mrna1;geneID=FBgn0031853.12.path1;Name=FBgn0031853.12;Dir=sensecoverage=100.0;identity=99.1;matches=2052;mismatches=18;indels=0;unknowns=0;locus=RLOC_00022220
Chr2	stalkie_big_nohaplotig	exon	141206298	141207705	98	+	.	Parent=FBgn0031853.12.mrna1;Target=FBgn0031853.12 1 1408 +
Chr2	stalkie_big_nohaplotig	exon	141207784	141208445	99	+	.	Parent=FBgn0031853.12.mrna1;Target=FBgn0031853.12 1409 2070 +
Chr2	stalkie_big_nohaplotig	CDS	141206298	141207705	.	+	0	Parent=FBgn0031853.12.mrna1;Target=FBgn0031853.12 1 1408 +
Chr2	stalkie_big_nohaplotig	CDS	141207784	141208445	.	+	2	Parent=FBgn0031853.12.mrna1;Target=FBgn0031853.12 1409 2070 +
Chr2	gffcl	locus	141215619	141216889	.	+	.	ID=RLOC_00022221;geneIDs=comp153403_c0_seq1.path1;transcripts=comp153403_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141215619	141216889	.	+	.	ID=comp153403_c0_seq1.mrna1;geneID=comp153403_c0_seq1.path1;Name=comp153403_c0_seq1;Dir=indeterminatecoverage=98.9;identity=98.9;matches=1263;mismatches=7;indels=7;unknowns=0;Target=comp153403_c0_seq1 1276 1 .;CDS_Target=comp153403_c0_seq1 479 294 .;locus=RLOC_00022221
Chr2	stalkie_big_nohaplotig	exon	141215619	141216889	98	+	.	Parent=comp153403_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	141215911	141216096	.	+	0	Parent=comp153403_c0_seq1.mrna1
Chr2	gffcl	locus	141221026	141221660	.	+	.	ID=RLOC_00022222;geneIDs=comp156893_c0_seq1.path1;transcripts=comp156893_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141221026	141221660	.	+	.	ID=comp156893_c0_seq1.mrna1;geneID=comp156893_c0_seq1.path1;Name=comp156893_c0_seq1;Dir=antisensecoverage=95.7;identity=95.6;matches=537;mismatches=19;indels=6;unknowns=0;Target=comp156893_c0_seq1 549 560 .;locus=RLOC_00022222
Chr2	stalkie_big_nohaplotig	exon	141221026	141221269	97	+	.	Parent=comp156893_c0_seq1.mrna1;Target=comp156893_c0_seq1 317 560 -
Chr2	stalkie_big_nohaplotig	exon	141221345	141221660	94	+	.	Parent=comp156893_c0_seq1.mrna1;Target=comp156893_c0_seq1 3 316 -
Chr2	stalkie_big_nohaplotig	CDS	141221026	141221037	.	+	0	Parent=comp156893_c0_seq1.mrna1
Chr2	gffcl	locus	141224117	141225265	.	-	.	ID=RLOC_00022223;geneIDs=comp82227_c0_seq1.path1;transcripts=comp82227_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141224117	141225265	.	-	.	ID=comp82227_c0_seq1.mrna1;geneID=comp82227_c0_seq1.path1;Name=comp82227_c0_seq1;Dir=sensecoverage=100.0;identity=95.9;matches=1058;mismatches=32;indels=13;unknowns=0;Target=comp82227_c0_seq1 395 532 +;locus=RLOC_00022223
Chr2	stalkie_big_nohaplotig	exon	141224117	141225039	95	-	.	Parent=comp82227_c0_seq1.mrna1;Target=comp82227_c0_seq1 175 1096 +
Chr2	stalkie_big_nohaplotig	exon	141225092	141225265	97	-	.	Parent=comp82227_c0_seq1.mrna1;Target=comp82227_c0_seq1 1 174 +
Chr2	stalkie_big_nohaplotig	CDS	141224675	141224812	.	-	0	Parent=comp82227_c0_seq1.mrna1
Chr2	gffcl	locus	141319153	141322286	.	+	.	ID=RLOC_00022224;geneIDs=comp152281_c1_seq1.path1;transcripts=comp152281_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141319153	141322286	.	+	.	ID=comp152281_c1_seq1.mrna1;geneID=comp152281_c1_seq1.path1;Name=comp152281_c1_seq1;Dir=sensecoverage=98.2;identity=97.4;matches=1220;mismatches=29;indels=4;unknowns=0;locus=RLOC_00022224
Chr2	stalkie_big_nohaplotig	exon	141319153	141319435	96	+	.	Parent=comp152281_c1_seq1.mrna1;Target=comp152281_c1_seq1 23 305 +
Chr2	stalkie_big_nohaplotig	exon	141319550	141319837	92	+	.	Parent=comp152281_c1_seq1.mrna1;Target=comp152281_c1_seq1 318 601 +
Chr2	stalkie_big_nohaplotig	exon	141321014	141321090	100	+	.	Parent=comp152281_c1_seq1.mrna1;Target=comp152281_c1_seq1 602 678 +
Chr2	stalkie_big_nohaplotig	exon	141321682	141322286	99	+	.	Parent=comp152281_c1_seq1.mrna1;Target=comp152281_c1_seq1 679 1283 +
Chr2	stalkie_big_nohaplotig	CDS	141321037	141321090	.	+	0	Parent=comp152281_c1_seq1.mrna1;Target=comp152281_c1_seq1 625 678 +
Chr2	stalkie_big_nohaplotig	CDS	141321682	141322119	.	+	0	Parent=comp152281_c1_seq1.mrna1;Target=comp152281_c1_seq1 679 1116 +
Chr2	gffcl	locus	141323970	141327687	.	+	.	ID=RLOC_00022225;geneIDs=comp157719_c0_seq1.path1;transcripts=comp157719_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141323970	141327687	.	+	.	ID=comp157719_c0_seq1.mrna1;geneID=comp157719_c0_seq1.path1;Name=comp157719_c0_seq1;Dir=antisensecoverage=100.0;identity=96.3;matches=1808;mismatches=16;indels=54;unknowns=0;locus=RLOC_00022225
Chr2	stalkie_big_nohaplotig	exon	141323970	141324950	94	+	.	Parent=comp157719_c0_seq1.mrna1;Target=comp157719_c0_seq1 844 1878 -
Chr2	stalkie_big_nohaplotig	exon	141326845	141327687	99	+	.	Parent=comp157719_c0_seq1.mrna1;Target=comp157719_c0_seq1 1 843 -
Chr2	stalkie_big_nohaplotig	CDS	141324887	141324950	.	+	0	Parent=comp157719_c0_seq1.mrna1;Target=comp157719_c0_seq1 844 907 .
Chr2	stalkie_big_nohaplotig	CDS	141326845	141327119	.	+	2	Parent=comp157719_c0_seq1.mrna1;Target=comp157719_c0_seq1 569 843 .
Chr2	gffcl	locus	141336099	141338857	.	-	.	ID=RLOC_00022226;geneIDs=FBgn0040227.1.path1;transcripts=FBgn0040227.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141336099	141338857	.	-	.	ID=FBgn0040227.1.mrna1;geneID=FBgn0040227.1.path1;Name=FBgn0040227.1;Dir=sensecoverage=100.0;identity=99.3;matches=1662;mismatches=12;indels=0;unknowns=0;locus=RLOC_00022226
Chr2	stalkie_big_nohaplotig	exon	141336099	141336647	98	-	.	Parent=FBgn0040227.1.mrna1;Target=FBgn0040227.1 1126 1674 +
Chr2	stalkie_big_nohaplotig	exon	141336907	141337199	100	-	.	Parent=FBgn0040227.1.mrna1;Target=FBgn0040227.1 833 1125 +
Chr2	stalkie_big_nohaplotig	exon	141337646	141338127	99	-	.	Parent=FBgn0040227.1.mrna1;Target=FBgn0040227.1 351 832 +
Chr2	stalkie_big_nohaplotig	exon	141338188	141338335	100	-	.	Parent=FBgn0040227.1.mrna1;Target=FBgn0040227.1 203 350 +
Chr2	stalkie_big_nohaplotig	exon	141338656	141338857	99	-	.	Parent=FBgn0040227.1.mrna1;Target=FBgn0040227.1 1 202 +
Chr2	stalkie_big_nohaplotig	CDS	141336099	141336647	.	-	0	Parent=FBgn0040227.1.mrna1;Target=FBgn0040227.1 1126 1674 +
Chr2	stalkie_big_nohaplotig	CDS	141336907	141337199	.	-	2	Parent=FBgn0040227.1.mrna1;Target=FBgn0040227.1 833 1125 +
Chr2	stalkie_big_nohaplotig	CDS	141337646	141338127	.	-	1	Parent=FBgn0040227.1.mrna1;Target=FBgn0040227.1 351 832 +
Chr2	stalkie_big_nohaplotig	CDS	141338188	141338335	.	-	2	Parent=FBgn0040227.1.mrna1;Target=FBgn0040227.1 203 350 +
Chr2	stalkie_big_nohaplotig	CDS	141338656	141338857	.	-	0	Parent=FBgn0040227.1.mrna1;Target=FBgn0040227.1 1 202 +
Chr2	gffcl	locus	141339024	141341727	.	-	.	ID=RLOC_00022227;geneIDs=comp152397_c0_seq1.path1;transcripts=comp152397_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141339024	141341727	.	-	.	ID=comp152397_c0_seq1.mrna1;geneID=comp152397_c0_seq1.path1;Name=comp152397_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1295;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022227
Chr2	stalkie_big_nohaplotig	exon	141339024	141339047	100	-	.	Parent=comp152397_c0_seq1.mrna1;Target=comp152397_c0_seq1 1302 1279 .
Chr2	stalkie_big_nohaplotig	exon	141340112	141340887	99	-	.	Parent=comp152397_c0_seq1.mrna1;Target=comp152397_c0_seq1 1278 503 .
Chr2	stalkie_big_nohaplotig	exon	141340946	141341070	100	-	.	Parent=comp152397_c0_seq1.mrna1;Target=comp152397_c0_seq1 502 378 .
Chr2	stalkie_big_nohaplotig	exon	141341297	141341502	99	-	.	Parent=comp152397_c0_seq1.mrna1;Target=comp152397_c0_seq1 377 172 .
Chr2	stalkie_big_nohaplotig	exon	141341557	141341727	99	-	.	Parent=comp152397_c0_seq1.mrna1;Target=comp152397_c0_seq1 171 1 .
Chr2	stalkie_big_nohaplotig	CDS	141340559	141340887	.	-	2	Parent=comp152397_c0_seq1.mrna1;Target=comp152397_c0_seq1 831 503 .
Chr2	stalkie_big_nohaplotig	CDS	141340946	141341070	.	-	1	Parent=comp152397_c0_seq1.mrna1;Target=comp152397_c0_seq1 502 378 .
Chr2	stalkie_big_nohaplotig	CDS	141341297	141341502	.	-	0	Parent=comp152397_c0_seq1.mrna1;Target=comp152397_c0_seq1 377 172 .
Chr2	stalkie_big_nohaplotig	CDS	141341557	141341619	.	-	0	Parent=comp152397_c0_seq1.mrna1;Target=comp152397_c0_seq1 171 109 .
Chr2	gffcl	locus	141344255	141350354	.	+	.	ID=RLOC_00022228;geneIDs=FBgn0039098.1.path1,comp153096_c0_seq1.path1;transcripts=comp153096_c0_seq1.mrna1,FBgn0039098.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141344255	141346529	.	+	.	ID=comp153096_c0_seq1.mrna1;geneID=comp153096_c0_seq1.path1;Name=comp153096_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=458;mismatches=5;indels=0;unknowns=0;Target=comp153096_c0_seq1 236 463 .;locus=RLOC_00022228
Chr2	stalkie_big_nohaplotig	exon	141344255	141344672	99	+	.	Parent=comp153096_c0_seq1.mrna1;Target=comp153096_c0_seq1 46 463 -
Chr2	stalkie_big_nohaplotig	exon	141346485	141346529	97	+	.	Parent=comp153096_c0_seq1.mrna1;Target=comp153096_c0_seq1 1 45 -
Chr2	stalkie_big_nohaplotig	CDS	141344255	141344482	.	+	0	Parent=comp153096_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141346481	141350354	.	+	.	ID=FBgn0039098.1.mrna1;geneID=FBgn0039098.1.path1;Name=FBgn0039098.1;Dir=sensecoverage=99.7;identity=99.5;matches=580;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022228
Chr2	stalkie_big_nohaplotig	exon	141346481	141346634	99	+	.	Parent=FBgn0039098.1.mrna1;Target=FBgn0039098.1 3 156 +
Chr2	stalkie_big_nohaplotig	exon	141346704	141346871	98	+	.	Parent=FBgn0039098.1.mrna1;Target=FBgn0039098.1 157 324 +
Chr2	stalkie_big_nohaplotig	exon	141346979	141347119	100	+	.	Parent=FBgn0039098.1.mrna1;Target=FBgn0039098.1 325 465 +
Chr2	stalkie_big_nohaplotig	exon	141350235	141350354	100	+	.	Parent=FBgn0039098.1.mrna1;Target=FBgn0039098.1 466 585 +
Chr2	stalkie_big_nohaplotig	CDS	141346500	141346634	.	+	0	Parent=FBgn0039098.1.mrna1;Target=FBgn0039098.1 22 156 +
Chr2	stalkie_big_nohaplotig	CDS	141346704	141346871	.	+	0	Parent=FBgn0039098.1.mrna1;Target=FBgn0039098.1 157 324 +
Chr2	stalkie_big_nohaplotig	CDS	141346979	141347119	.	+	0	Parent=FBgn0039098.1.mrna1;Target=FBgn0039098.1 325 465 +
Chr2	stalkie_big_nohaplotig	CDS	141350235	141350354	.	+	0	Parent=FBgn0039098.1.mrna1;Target=FBgn0039098.1 466 585 +
Chr2	gffcl	locus	141358445	141360318	.	-	.	ID=RLOC_00022229;geneIDs=comp154092_c0_seq1.path1;transcripts=comp154092_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141358445	141360318	.	-	.	ID=comp154092_c0_seq1.mrna1;geneID=comp154092_c0_seq1.path1;Name=comp154092_c0_seq1;Dir=indeterminatecoverage=99.9;identity=94.4;matches=1708;mismatches=41;indels=61;unknowns=0;Target=comp154092_c0_seq1 495 364 .;locus=RLOC_00022229
Chr2	stalkie_big_nohaplotig	exon	141358445	141358632	86	-	.	Parent=comp154092_c0_seq1.mrna1;Target=comp154092_c0_seq1 1766 1575 .
Chr2	stalkie_big_nohaplotig	exon	141358714	141360318	95	-	.	Parent=comp154092_c0_seq1.mrna1;Target=comp154092_c0_seq1 1574 1 .
Chr2	stalkie_big_nohaplotig	CDS	141359830	141359961	.	-	0	Parent=comp154092_c0_seq1.mrna1
Chr2	gffcl	locus	141362648	141364372	.	+	.	ID=RLOC_00022230;geneIDs=comp162220_c0_seq1.path1;transcripts=comp162220_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141362648	141364372	.	+	.	ID=comp162220_c0_seq1.mrna1;geneID=comp162220_c0_seq1.path1;Name=comp162220_c0_seq1;Dir=antisensecoverage=97.7;identity=97.3;matches=1431;mismatches=38;indels=1;unknowns=0;Target=comp162220_c0_seq1 965 1480 .;locus=RLOC_00022230
Chr2	stalkie_big_nohaplotig	exon	141362648	141363224	96	+	.	Parent=comp162220_c0_seq1.mrna1;Target=comp162220_c0_seq1 904 1480 -
Chr2	stalkie_big_nohaplotig	exon	141363278	141363364	98	+	.	Parent=comp162220_c0_seq1.mrna1;Target=comp162220_c0_seq1 817 903 -
Chr2	stalkie_big_nohaplotig	exon	141363434	141363716	100	+	.	Parent=comp162220_c0_seq1.mrna1;Target=comp162220_c0_seq1 534 816 -
Chr2	stalkie_big_nohaplotig	exon	141363779	141364005	99	+	.	Parent=comp162220_c0_seq1.mrna1;Target=comp162220_c0_seq1 307 533 -
Chr2	stalkie_big_nohaplotig	exon	141364077	141364372	93	+	.	Parent=comp162220_c0_seq1.mrna1;Target=comp162220_c0_seq1 12 306 -
Chr2	stalkie_big_nohaplotig	CDS	141362648	141363163	.	+	0	Parent=comp162220_c0_seq1.mrna1
Chr2	gffcl	locus	141399597	141400281	.	-	.	ID=RLOC_00022231;geneIDs=comp96661_c0_seq1.path1;transcripts=comp96661_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141399597	141400281	.	-	.	ID=comp96661_c0_seq1.mrna1;geneID=comp96661_c0_seq1.path1;Name=comp96661_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=587;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022231
Chr2	stalkie_big_nohaplotig	exon	141399597	141400092	100	-	.	Parent=comp96661_c0_seq1.mrna1;Target=comp96661_c0_seq1 1 496 -
Chr2	stalkie_big_nohaplotig	exon	141400190	141400281	98	-	.	Parent=comp96661_c0_seq1.mrna1;Target=comp96661_c0_seq1 497 588 -
Chr2	stalkie_big_nohaplotig	CDS	141399695	141400092	.	-	2	Parent=comp96661_c0_seq1.mrna1;Target=comp96661_c0_seq1 99 496 .
Chr2	stalkie_big_nohaplotig	CDS	141400190	141400196	.	-	0	Parent=comp96661_c0_seq1.mrna1;Target=comp96661_c0_seq1 497 503 .
Chr2	gffcl	locus	141402599	141403455	.	-	.	ID=RLOC_00022232;geneIDs=comp134830_c0_seq1.path1;transcripts=comp134830_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141402599	141403455	.	-	.	ID=comp134830_c0_seq1.mrna1;geneID=comp134830_c0_seq1.path1;Name=comp134830_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=856;mismatches=1;indels=1;unknowns=0;Target=comp134830_c0_seq1 858 1 .;CDS_Target=comp134830_c0_seq1 348 142 .;locus=RLOC_00022232
Chr2	stalkie_big_nohaplotig	exon	141402599	141403455	99	-	.	Parent=comp134830_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	141403109	141403314	.	-	0	Parent=comp134830_c0_seq1.mrna1
Chr2	gffcl	locus	141407943	141408526	.	+	.	ID=RLOC_00022233;geneIDs=FBgn0039453.1.path1;transcripts=FBgn0039453.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141407943	141408526	.	+	.	ID=FBgn0039453.1.mrna1;geneID=FBgn0039453.1.path1;Name=FBgn0039453.1;Dir=sensecoverage=99.4;identity=97.9;matches=508;mismatches=11;indels=0;unknowns=0;locus=RLOC_00022233
Chr2	stalkie_big_nohaplotig	exon	141407943	141408006	98	+	.	Parent=FBgn0039453.1.mrna1;Target=FBgn0039453.1 1 64 +
Chr2	stalkie_big_nohaplotig	exon	141408072	141408526	97	+	.	Parent=FBgn0039453.1.mrna1;Target=FBgn0039453.1 65 519 +
Chr2	stalkie_big_nohaplotig	CDS	141407943	141408006	.	+	0	Parent=FBgn0039453.1.mrna1;Target=FBgn0039453.1 1 64 +
Chr2	stalkie_big_nohaplotig	CDS	141408072	141408526	.	+	2	Parent=FBgn0039453.1.mrna1;Target=FBgn0039453.1 65 519 +
Chr2	gffcl	locus	141424351	141425159	.	-	.	ID=RLOC_00022234;geneIDs=ORF3180.path1;transcripts=ORF3180.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141424351	141425159	.	-	.	ID=ORF3180.mrna1;geneID=ORF3180.path1;Name=ORF3180;Dir=sensecoverage=99.7;identity=98.5;matches=746;mismatches=11;indels=0;unknowns=0;locus=RLOC_00022234
Chr2	stalkie_big_nohaplotig	exon	141424351	141425075	98	-	.	Parent=ORF3180.mrna1;Target=ORF3180 35 759 +
Chr2	stalkie_big_nohaplotig	exon	141425128	141425159	93	-	.	Parent=ORF3180.mrna1;Target=ORF3180 3 34 +
Chr2	stalkie_big_nohaplotig	CDS	141424351	141425075	.	-	2	Parent=ORF3180.mrna1;Target=ORF3180 35 759 +
Chr2	stalkie_big_nohaplotig	CDS	141425128	141425158	.	-	0	Parent=ORF3180.mrna1;Target=ORF3180 4 34 +
Chr2	gffcl	locus	141427688	141435864	.	+	.	ID=RLOC_00022235;geneIDs=FBgn0039451.1.path1;transcripts=FBgn0039451.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141427688	141435864	.	+	.	ID=FBgn0039451.1.mrna1;geneID=FBgn0039451.1.path1;Name=FBgn0039451.1;Dir=sensecoverage=100.0;identity=99.8;matches=2685;mismatches=6;indels=0;unknowns=0;locus=RLOC_00022235
Chr2	stalkie_big_nohaplotig	exon	141427688	141428302	100	+	.	Parent=FBgn0039451.1.mrna1;Target=FBgn0039451.1 1 615 +
Chr2	stalkie_big_nohaplotig	exon	141433654	141433839	100	+	.	Parent=FBgn0039451.1.mrna1;Target=FBgn0039451.1 616 801 +
Chr2	stalkie_big_nohaplotig	exon	141433901	141435733	99	+	.	Parent=FBgn0039451.1.mrna1;Target=FBgn0039451.1 802 2634 +
Chr2	stalkie_big_nohaplotig	exon	141435808	141435864	100	+	.	Parent=FBgn0039451.1.mrna1;Target=FBgn0039451.1 2635 2691 +
Chr2	stalkie_big_nohaplotig	CDS	141427688	141428302	.	+	0	Parent=FBgn0039451.1.mrna1;Target=FBgn0039451.1 1 615 +
Chr2	stalkie_big_nohaplotig	CDS	141433654	141433839	.	+	0	Parent=FBgn0039451.1.mrna1;Target=FBgn0039451.1 616 801 +
Chr2	stalkie_big_nohaplotig	CDS	141433901	141435733	.	+	0	Parent=FBgn0039451.1.mrna1;Target=FBgn0039451.1 802 2634 +
Chr2	stalkie_big_nohaplotig	CDS	141435808	141435864	.	+	0	Parent=FBgn0039451.1.mrna1;Target=FBgn0039451.1 2635 2691 +
Chr2	gffcl	locus	141438034	141438706	.	-	.	ID=RLOC_00022236;geneIDs=comp117698_c0_seq1.path1;transcripts=comp117698_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141438034	141438706	.	-	.	ID=comp117698_c0_seq1.mrna1;geneID=comp117698_c0_seq1.path1;Name=comp117698_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=671;mismatches=1;indels=1;unknowns=0;Target=comp117698_c0_seq1 674 3 .;CDS_Target=comp117698_c0_seq1 201 109 .;locus=RLOC_00022236
Chr2	stalkie_big_nohaplotig	exon	141438034	141438706	99	-	.	Parent=comp117698_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	141438508	141438600	.	-	0	Parent=comp117698_c0_seq1.mrna1
Chr2	gffcl	locus	141440380	141442525	.	-	.	ID=RLOC_00022237;geneIDs=FBgn0039450.1.path1;transcripts=FBgn0039450.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141440380	141442525	.	-	.	ID=FBgn0039450.1.mrna1;geneID=FBgn0039450.1.path1;Name=FBgn0039450.1;Dir=sensecoverage=100.0;identity=99.7;matches=1211;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022237
Chr2	stalkie_big_nohaplotig	exon	141440380	141440613	99	-	.	Parent=FBgn0039450.1.mrna1;Target=FBgn0039450.1 982 1215 +
Chr2	stalkie_big_nohaplotig	exon	141441147	141441533	99	-	.	Parent=FBgn0039450.1.mrna1;Target=FBgn0039450.1 595 981 +
Chr2	stalkie_big_nohaplotig	exon	141441592	141442133	99	-	.	Parent=FBgn0039450.1.mrna1;Target=FBgn0039450.1 53 594 +
Chr2	stalkie_big_nohaplotig	exon	141442474	141442525	100	-	.	Parent=FBgn0039450.1.mrna1;Target=FBgn0039450.1 1 52 +
Chr2	stalkie_big_nohaplotig	CDS	141440380	141440613	.	-	0	Parent=FBgn0039450.1.mrna1;Target=FBgn0039450.1 982 1215 +
Chr2	stalkie_big_nohaplotig	CDS	141441147	141441533	.	-	0	Parent=FBgn0039450.1.mrna1;Target=FBgn0039450.1 595 981 +
Chr2	stalkie_big_nohaplotig	CDS	141441592	141442133	.	-	2	Parent=FBgn0039450.1.mrna1;Target=FBgn0039450.1 53 594 +
Chr2	stalkie_big_nohaplotig	CDS	141442474	141442525	.	-	0	Parent=FBgn0039450.1.mrna1;Target=FBgn0039450.1 1 52 +
Chr2	gffcl	locus	141443160	141444590	.	+	.	ID=RLOC_00022238;geneIDs=FBgn0038989.1.path1;transcripts=FBgn0038989.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141443160	141444590	.	+	.	ID=FBgn0038989.1.mrna1;geneID=FBgn0038989.1.path1;Name=FBgn0038989.1;Dir=sensecoverage=100.0;identity=98.9;matches=780;mismatches=4;indels=5;unknowns=0;locus=RLOC_00022238
Chr2	stalkie_big_nohaplotig	exon	141443160	141443263	99	+	.	Parent=FBgn0038989.1.mrna1;Target=FBgn0038989.1 1 104 +
Chr2	stalkie_big_nohaplotig	exon	141443323	141443661	99	+	.	Parent=FBgn0038989.1.mrna1;Target=FBgn0038989.1 105 444 +
Chr2	stalkie_big_nohaplotig	exon	141444250	141444590	98	+	.	Parent=FBgn0038989.1.mrna1;Target=FBgn0038989.1 445 789 +
Chr2	stalkie_big_nohaplotig	CDS	141443162	141443263	.	+	0	Parent=FBgn0038989.1.mrna1;Target=FBgn0038989.1 3 104 +
Chr2	stalkie_big_nohaplotig	CDS	141443323	141443387	.	+	0	Parent=FBgn0038989.1.mrna1;Target=FBgn0038989.1 105 170 +
Chr2	gffcl	locus	141445258	141445629	.	-	.	ID=RLOC_00022239;geneIDs=FBgn0014949.path1;transcripts=FBgn0014949.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141445258	141445629	.	-	.	ID=FBgn0014949.mrna1;geneID=FBgn0014949.path1;Name=FBgn0014949;Dir=sensecoverage=100.0;identity=100.0;matches=276;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022239
Chr2	stalkie_big_nohaplotig	exon	141445258	141445347	100	-	.	Parent=FBgn0014949.mrna1;Target=FBgn0014949 187 276 +
Chr2	stalkie_big_nohaplotig	exon	141445444	141445629	100	-	.	Parent=FBgn0014949.mrna1;Target=FBgn0014949 1 186 +
Chr2	stalkie_big_nohaplotig	CDS	141445258	141445347	.	-	0	Parent=FBgn0014949.mrna1;Target=FBgn0014949 187 276 +
Chr2	stalkie_big_nohaplotig	CDS	141445444	141445629	.	-	0	Parent=FBgn0014949.mrna1;Target=FBgn0014949 1 186 +
Chr2	gffcl	locus	141450417	141450970	.	+	.	ID=RLOC_00022240;geneIDs=FBgn0039654.path1;transcripts=FBgn0039654.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141450417	141450970	.	+	.	ID=FBgn0039654.mrna1;geneID=FBgn0039654.path1;Name=FBgn0039654;Dir=indeterminatecoverage=100.0;identity=99.5;matches=552;mismatches=2;indels=1;unknowns=0;Target=FBgn0039654 555 1 .;locus=RLOC_00022240
Chr2	stalkie_big_nohaplotig	exon	141450417	141450970	99	+	.	Parent=FBgn0039654.mrna1
Chr2	stalkie_big_nohaplotig	CDS	141450417	141450970	.	+	0	Parent=FBgn0039654.mrna1
Chr2	gffcl	locus	141461199	141462304	.	-	.	ID=RLOC_00022241;geneIDs=FBgn0028837.1.path1;transcripts=FBgn0028837.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141461199	141462304	.	-	.	ID=FBgn0028837.1.mrna1;geneID=FBgn0028837.1.path1;Name=FBgn0028837.1;Dir=sensecoverage=100.0;identity=99.7;matches=1050;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022241
Chr2	stalkie_big_nohaplotig	exon	141461199	141461840	100	-	.	Parent=FBgn0028837.1.mrna1;Target=FBgn0028837.1 412 1053 +
Chr2	stalkie_big_nohaplotig	exon	141461894	141462304	99	-	.	Parent=FBgn0028837.1.mrna1;Target=FBgn0028837.1 1 411 +
Chr2	stalkie_big_nohaplotig	CDS	141461199	141461840	.	-	0	Parent=FBgn0028837.1.mrna1;Target=FBgn0028837.1 412 1053 +
Chr2	stalkie_big_nohaplotig	CDS	141461894	141462304	.	-	0	Parent=FBgn0028837.1.mrna1;Target=FBgn0028837.1 1 411 +
Chr2	gffcl	locus	141468683	141469658	.	-	.	ID=RLOC_00022243;geneIDs=FBgn0039116.1.path1;transcripts=FBgn0039116.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141468683	141469658	.	-	.	ID=FBgn0039116.1.mrna1;geneID=FBgn0039116.1.path1;Name=FBgn0039116.1;Dir=sensecoverage=100.0;identity=99.9;matches=773;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022243
Chr2	stalkie_big_nohaplotig	exon	141468683	141469054	100	-	.	Parent=FBgn0039116.1.mrna1;Target=FBgn0039116.1 403 774 +
Chr2	stalkie_big_nohaplotig	exon	141469115	141469435	99	-	.	Parent=FBgn0039116.1.mrna1;Target=FBgn0039116.1 82 402 +
Chr2	stalkie_big_nohaplotig	exon	141469578	141469658	100	-	.	Parent=FBgn0039116.1.mrna1;Target=FBgn0039116.1 1 81 +
Chr2	stalkie_big_nohaplotig	CDS	141468683	141469054	.	-	0	Parent=FBgn0039116.1.mrna1;Target=FBgn0039116.1 403 774 +
Chr2	stalkie_big_nohaplotig	CDS	141469115	141469435	.	-	0	Parent=FBgn0039116.1.mrna1;Target=FBgn0039116.1 82 402 +
Chr2	stalkie_big_nohaplotig	CDS	141469578	141469658	.	-	0	Parent=FBgn0039116.1.mrna1;Target=FBgn0039116.1 1 81 +
Chr2	gffcl	locus	141471196	141471870	.	+	.	ID=RLOC_00022244;geneIDs=FBgn0039115.1.path1;transcripts=FBgn0039115.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141471196	141471870	.	+	.	ID=FBgn0039115.1.mrna1;geneID=FBgn0039115.1.path1;Name=FBgn0039115.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=675;mismatches=0;indels=0;unknowns=0;Target=FBgn0039115.1 675 1 .;locus=RLOC_00022244
Chr2	stalkie_big_nohaplotig	exon	141471196	141471870	100	+	.	Parent=FBgn0039115.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	141471196	141471870	.	+	0	Parent=FBgn0039115.1.mrna1
Chr2	gffcl	locus	141472083	141472427	.	+	.	ID=RLOC_00022245;geneIDs=comp149857_c0_seq1.path1;transcripts=comp149857_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141472083	141472427	.	+	.	ID=comp149857_c0_seq1.mrna1;geneID=comp149857_c0_seq1.path1;Name=comp149857_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=345;mismatches=0;indels=0;unknowns=0;Target=comp149857_c0_seq1 345 1 .;CDS_Target=comp149857_c0_seq1 227 192 .;locus=RLOC_00022245
Chr2	stalkie_big_nohaplotig	exon	141472083	141472427	100	+	.	Parent=comp149857_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	141472274	141472309	.	+	0	Parent=comp149857_c0_seq1.mrna1
Chr2	gffcl	locus	141472833	141475932	.	-	.	ID=RLOC_00022246;geneIDs=FBgn0039114.1.path1,comp139992_c0_seq1.path1;transcripts=FBgn0039114.1.mrna1,comp139992_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141472833	141475932	.	-	.	ID=FBgn0039114.1.mrna1;geneID=FBgn0039114.1.path1;Name=FBgn0039114.1;Dir=sensecoverage=100.0;identity=99.9;matches=1226;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022246
Chr2	stalkie_big_nohaplotig	exon	141472833	141472985	100	-	.	Parent=FBgn0039114.1.mrna1;Target=FBgn0039114.1 1075 1227 +
Chr2	stalkie_big_nohaplotig	exon	141473061	141473238	100	-	.	Parent=FBgn0039114.1.mrna1;Target=FBgn0039114.1 897 1074 +
Chr2	stalkie_big_nohaplotig	exon	141473592	141473782	99	-	.	Parent=FBgn0039114.1.mrna1;Target=FBgn0039114.1 706 896 +
Chr2	stalkie_big_nohaplotig	exon	141473850	141474028	100	-	.	Parent=FBgn0039114.1.mrna1;Target=FBgn0039114.1 527 705 +
Chr2	stalkie_big_nohaplotig	exon	141475213	141475423	100	-	.	Parent=FBgn0039114.1.mrna1;Target=FBgn0039114.1 316 526 +
Chr2	stalkie_big_nohaplotig	exon	141475519	141475817	100	-	.	Parent=FBgn0039114.1.mrna1;Target=FBgn0039114.1 17 315 +
Chr2	stalkie_big_nohaplotig	exon	141475917	141475932	100	-	.	Parent=FBgn0039114.1.mrna1;Target=FBgn0039114.1 1 16 +
Chr2	stalkie_big_nohaplotig	CDS	141472833	141472985	.	-	0	Parent=FBgn0039114.1.mrna1;Target=FBgn0039114.1 1075 1227 +
Chr2	stalkie_big_nohaplotig	CDS	141473061	141473238	.	-	1	Parent=FBgn0039114.1.mrna1;Target=FBgn0039114.1 897 1074 +
Chr2	stalkie_big_nohaplotig	CDS	141473592	141473782	.	-	0	Parent=FBgn0039114.1.mrna1;Target=FBgn0039114.1 706 896 +
Chr2	stalkie_big_nohaplotig	CDS	141473850	141474028	.	-	2	Parent=FBgn0039114.1.mrna1;Target=FBgn0039114.1 527 705 +
Chr2	stalkie_big_nohaplotig	CDS	141475213	141475423	.	-	0	Parent=FBgn0039114.1.mrna1;Target=FBgn0039114.1 316 526 +
Chr2	stalkie_big_nohaplotig	CDS	141475519	141475817	.	-	2	Parent=FBgn0039114.1.mrna1;Target=FBgn0039114.1 17 315 +
Chr2	stalkie_big_nohaplotig	CDS	141475917	141475932	.	-	0	Parent=FBgn0039114.1.mrna1;Target=FBgn0039114.1 1 16 +
Chr2	stalkie_big_nohaplotig	mRNA	141474005	141474782	.	-	.	ID=comp139992_c0_seq1.mrna1;geneID=comp139992_c0_seq1.path1;Name=comp139992_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=776;mismatches=2;indels=0;unknowns=0;Target=comp139992_c0_seq1 778 1 .;CDS_Target=comp139992_c0_seq1 521 411 .;locus=RLOC_00022246
Chr2	stalkie_big_nohaplotig	exon	141474005	141474782	99	-	.	Parent=comp139992_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	141474262	141474372	.	-	0	Parent=comp139992_c0_seq1.mrna1
Chr2	gffcl	locus	141479245	141481957	.	+	.	ID=RLOC_00022247;geneIDs=FBgn0039113.2.path1,comp160813_c1_seq1.path1;transcripts=FBgn0039113.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141479245	141481900	.	+	.	ID=FBgn0039113.2.mrna1;geneID=FBgn0039113.2.path1;Name=FBgn0039113.2;Dir=sensecoverage=100.0;identity=99.8;matches=1898;mismatches=3;indels=0;unknowns=4;locus=RLOC_00022247
Chr2	stalkie_big_nohaplotig	exon	141479245	141479335	98	+	.	Parent=FBgn0039113.2.mrna1;Target=FBgn0039113.2 1 91 +
Chr2	stalkie_big_nohaplotig	exon	141479423	141479683	100	+	.	Parent=FBgn0039113.2.mrna1;Target=FBgn0039113.2 92 352 +
Chr2	stalkie_big_nohaplotig	exon	141479739	141479896	99	+	.	Parent=FBgn0039113.2.mrna1;Target=FBgn0039113.2 353 510 +
Chr2	stalkie_big_nohaplotig	exon	141480315	141481126	100	+	.	Parent=FBgn0039113.2.mrna1;Target=FBgn0039113.2 511 1322 +
Chr2	stalkie_big_nohaplotig	exon	141481190	141481347	100	+	.	Parent=FBgn0039113.2.mrna1;Target=FBgn0039113.2 1323 1480 +
Chr2	stalkie_big_nohaplotig	exon	141481403	141481552	99	+	.	Parent=FBgn0039113.2.mrna1;Target=FBgn0039113.2 1481 1630 +
Chr2	stalkie_big_nohaplotig	exon	141481626	141481900	100	+	.	Parent=FBgn0039113.2.mrna1;Target=FBgn0039113.2 1631 1905 +
Chr2	stalkie_big_nohaplotig	CDS	141479245	141479335	.	+	0	Parent=FBgn0039113.2.mrna1;Target=FBgn0039113.2 1 91 +
Chr2	stalkie_big_nohaplotig	CDS	141479423	141479683	.	+	2	Parent=FBgn0039113.2.mrna1;Target=FBgn0039113.2 92 352 +
Chr2	stalkie_big_nohaplotig	CDS	141479739	141479896	.	+	2	Parent=FBgn0039113.2.mrna1;Target=FBgn0039113.2 353 510 +
Chr2	stalkie_big_nohaplotig	CDS	141480315	141481126	.	+	0	Parent=FBgn0039113.2.mrna1;Target=FBgn0039113.2 511 1322 +
Chr2	stalkie_big_nohaplotig	CDS	141481190	141481347	.	+	1	Parent=FBgn0039113.2.mrna1;Target=FBgn0039113.2 1323 1480 +
Chr2	stalkie_big_nohaplotig	CDS	141481403	141481552	.	+	2	Parent=FBgn0039113.2.mrna1;Target=FBgn0039113.2 1481 1630 +
Chr2	stalkie_big_nohaplotig	CDS	141481626	141481900	.	+	2	Parent=FBgn0039113.2.mrna1;Target=FBgn0039113.2 1631 1905 +
Chr2	gffcl	locus	141489233	141490240	.	+	.	ID=RLOC_00022249;geneIDs=FBgn0039112.1.path1;transcripts=FBgn0039112.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141489233	141490240	.	+	.	ID=FBgn0039112.1.mrna1;geneID=FBgn0039112.1.path1;Name=FBgn0039112.1;Dir=sensecoverage=100.0;identity=100.0;matches=762;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022249
Chr2	stalkie_big_nohaplotig	exon	141489233	141489509	100	+	.	Parent=FBgn0039112.1.mrna1;Target=FBgn0039112.1 1 277 +
Chr2	stalkie_big_nohaplotig	exon	141489640	141489740	100	+	.	Parent=FBgn0039112.1.mrna1;Target=FBgn0039112.1 278 378 +
Chr2	stalkie_big_nohaplotig	exon	141489805	141489989	100	+	.	Parent=FBgn0039112.1.mrna1;Target=FBgn0039112.1 379 563 +
Chr2	stalkie_big_nohaplotig	exon	141490042	141490240	100	+	.	Parent=FBgn0039112.1.mrna1;Target=FBgn0039112.1 564 762 +
Chr2	stalkie_big_nohaplotig	CDS	141489233	141489509	.	+	0	Parent=FBgn0039112.1.mrna1;Target=FBgn0039112.1 1 277 +
Chr2	stalkie_big_nohaplotig	CDS	141489640	141489740	.	+	2	Parent=FBgn0039112.1.mrna1;Target=FBgn0039112.1 278 378 +
Chr2	stalkie_big_nohaplotig	CDS	141489805	141489989	.	+	0	Parent=FBgn0039112.1.mrna1;Target=FBgn0039112.1 379 563 +
Chr2	stalkie_big_nohaplotig	CDS	141490042	141490240	.	+	1	Parent=FBgn0039112.1.mrna1;Target=FBgn0039112.1 564 762 +
Chr2	gffcl	locus	141490465	141492513	.	-	.	ID=RLOC_00022250;geneIDs=FBgn0039111.1.path1;transcripts=FBgn0039111.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141490465	141492513	.	-	.	ID=FBgn0039111.1.mrna1;geneID=FBgn0039111.1.path1;Name=FBgn0039111.1;Dir=sensecoverage=100.0;identity=99.9;matches=710;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022250
Chr2	stalkie_big_nohaplotig	exon	141490465	141490620	100	-	.	Parent=FBgn0039111.1.mrna1;Target=FBgn0039111.1 556 711 +
Chr2	stalkie_big_nohaplotig	exon	141491660	141491974	99	-	.	Parent=FBgn0039111.1.mrna1;Target=FBgn0039111.1 241 555 +
Chr2	stalkie_big_nohaplotig	exon	141492050	141492193	100	-	.	Parent=FBgn0039111.1.mrna1;Target=FBgn0039111.1 97 240 +
Chr2	stalkie_big_nohaplotig	exon	141492418	141492513	100	-	.	Parent=FBgn0039111.1.mrna1;Target=FBgn0039111.1 1 96 +
Chr2	stalkie_big_nohaplotig	CDS	141490465	141490620	.	-	0	Parent=FBgn0039111.1.mrna1;Target=FBgn0039111.1 556 711 +
Chr2	stalkie_big_nohaplotig	CDS	141491660	141491974	.	-	0	Parent=FBgn0039111.1.mrna1;Target=FBgn0039111.1 241 555 +
Chr2	stalkie_big_nohaplotig	CDS	141492050	141492193	.	-	0	Parent=FBgn0039111.1.mrna1;Target=FBgn0039111.1 97 240 +
Chr2	stalkie_big_nohaplotig	CDS	141492418	141492513	.	-	0	Parent=FBgn0039111.1.mrna1;Target=FBgn0039111.1 1 96 +
Chr2	gffcl	locus	141494089	141495523	.	+	.	ID=RLOC_00022251;geneIDs=FBgn0028684.1.path1;transcripts=FBgn0028684.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141494089	141495523	.	+	.	ID=FBgn0028684.1.mrna1;geneID=FBgn0028684.1.path1;Name=FBgn0028684.1;Dir=sensecoverage=100.0;identity=99.5;matches=1313;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022251
Chr2	stalkie_big_nohaplotig	exon	141494089	141494334	99	+	.	Parent=FBgn0028684.1.mrna1;Target=FBgn0028684.1 1 246 +
Chr2	stalkie_big_nohaplotig	exon	141494392	141494812	99	+	.	Parent=FBgn0028684.1.mrna1;Target=FBgn0028684.1 247 667 +
Chr2	stalkie_big_nohaplotig	exon	141494871	141495523	99	+	.	Parent=FBgn0028684.1.mrna1;Target=FBgn0028684.1 668 1320 +
Chr2	stalkie_big_nohaplotig	CDS	141494089	141494334	.	+	0	Parent=FBgn0028684.1.mrna1;Target=FBgn0028684.1 1 246 +
Chr2	stalkie_big_nohaplotig	CDS	141494392	141494812	.	+	0	Parent=FBgn0028684.1.mrna1;Target=FBgn0028684.1 247 667 +
Chr2	stalkie_big_nohaplotig	CDS	141494871	141495523	.	+	2	Parent=FBgn0028684.1.mrna1;Target=FBgn0028684.1 668 1320 +
Chr2	gffcl	locus	141497676	141501257	.	-	.	ID=RLOC_00022252;geneIDs=FBgn0028475.1.path1;transcripts=FBgn0028475.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141497676	141501257	.	-	.	ID=FBgn0028475.1.mrna1;geneID=FBgn0028475.1.path1;Name=FBgn0028475.1;Dir=sensecoverage=100.0;identity=99.2;matches=2501;mismatches=7;indels=12;unknowns=0;locus=RLOC_00022252
Chr2	stalkie_big_nohaplotig	exon	141497676	141498110	96	-	.	Parent=FBgn0028475.1.mrna1;Target=FBgn0028475.1 2074 2520 +
Chr2	stalkie_big_nohaplotig	exon	141498169	141498373	100	-	.	Parent=FBgn0028475.1.mrna1;Target=FBgn0028475.1 1869 2073 +
Chr2	stalkie_big_nohaplotig	exon	141498937	141499271	100	-	.	Parent=FBgn0028475.1.mrna1;Target=FBgn0028475.1 1534 1868 +
Chr2	stalkie_big_nohaplotig	exon	141499332	141499480	99	-	.	Parent=FBgn0028475.1.mrna1;Target=FBgn0028475.1 1385 1533 +
Chr2	stalkie_big_nohaplotig	exon	141499548	141499722	99	-	.	Parent=FBgn0028475.1.mrna1;Target=FBgn0028475.1 1210 1384 +
Chr2	stalkie_big_nohaplotig	exon	141499782	141500303	100	-	.	Parent=FBgn0028475.1.mrna1;Target=FBgn0028475.1 688 1209 +
Chr2	stalkie_big_nohaplotig	exon	141500354	141500577	100	-	.	Parent=FBgn0028475.1.mrna1;Target=FBgn0028475.1 464 687 +
Chr2	stalkie_big_nohaplotig	exon	141500641	141501037	99	-	.	Parent=FBgn0028475.1.mrna1;Target=FBgn0028475.1 67 463 +
Chr2	stalkie_big_nohaplotig	exon	141501192	141501257	100	-	.	Parent=FBgn0028475.1.mrna1;Target=FBgn0028475.1 1 66 +
Chr2	stalkie_big_nohaplotig	CDS	141497676	141498110	.	-	0	Parent=FBgn0028475.1.mrna1;Target=FBgn0028475.1 2074 2520 +
Chr2	stalkie_big_nohaplotig	CDS	141498169	141498373	.	-	1	Parent=FBgn0028475.1.mrna1;Target=FBgn0028475.1 1869 2073 +
Chr2	stalkie_big_nohaplotig	CDS	141498937	141499271	.	-	0	Parent=FBgn0028475.1.mrna1;Target=FBgn0028475.1 1534 1868 +
Chr2	stalkie_big_nohaplotig	CDS	141499332	141499480	.	-	2	Parent=FBgn0028475.1.mrna1;Target=FBgn0028475.1 1385 1533 +
Chr2	stalkie_big_nohaplotig	CDS	141499548	141499722	.	-	0	Parent=FBgn0028475.1.mrna1;Target=FBgn0028475.1 1210 1384 +
Chr2	stalkie_big_nohaplotig	CDS	141499782	141500303	.	-	0	Parent=FBgn0028475.1.mrna1;Target=FBgn0028475.1 688 1209 +
Chr2	stalkie_big_nohaplotig	CDS	141500354	141500577	.	-	2	Parent=FBgn0028475.1.mrna1;Target=FBgn0028475.1 464 687 +
Chr2	stalkie_big_nohaplotig	CDS	141500641	141501037	.	-	0	Parent=FBgn0028475.1.mrna1;Target=FBgn0028475.1 67 463 +
Chr2	stalkie_big_nohaplotig	CDS	141501192	141501257	.	-	0	Parent=FBgn0028475.1.mrna1;Target=FBgn0028475.1 1 66 +
Chr2	gffcl	locus	141509080	141518098	.	-	.	ID=RLOC_00022254;geneIDs=FBgn0263782.1.path1;transcripts=FBgn0263782.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141509080	141518098	.	-	.	ID=FBgn0263782.1.mrna1;geneID=FBgn0263782.1.path1;Name=FBgn0263782.1;Dir=sensecoverage=100.0;identity=99.7;matches=2786;mismatches=6;indels=1;unknowns=0;locus=RLOC_00022254
Chr2	stalkie_big_nohaplotig	exon	141509080	141509410	99	-	.	Parent=FBgn0263782.1.mrna1;Target=FBgn0263782.1 2462 2793 +
Chr2	stalkie_big_nohaplotig	exon	141510126	141511426	99	-	.	Parent=FBgn0263782.1.mrna1;Target=FBgn0263782.1 1161 2461 +
Chr2	stalkie_big_nohaplotig	exon	141511496	141512065	99	-	.	Parent=FBgn0263782.1.mrna1;Target=FBgn0263782.1 591 1160 +
Chr2	stalkie_big_nohaplotig	exon	141512154	141512241	98	-	.	Parent=FBgn0263782.1.mrna1;Target=FBgn0263782.1 503 590 +
Chr2	stalkie_big_nohaplotig	exon	141517597	141518098	99	-	.	Parent=FBgn0263782.1.mrna1;Target=FBgn0263782.1 1 502 +
Chr2	stalkie_big_nohaplotig	CDS	141509080	141509410	.	-	2	Parent=FBgn0263782.1.mrna1;Target=FBgn0263782.1 2462 2793 +
Chr2	stalkie_big_nohaplotig	CDS	141510126	141511426	.	-	1	Parent=FBgn0263782.1.mrna1;Target=FBgn0263782.1 1161 2461 +
Chr2	stalkie_big_nohaplotig	CDS	141511496	141512065	.	-	1	Parent=FBgn0263782.1.mrna1;Target=FBgn0263782.1 591 1160 +
Chr2	stalkie_big_nohaplotig	CDS	141512154	141512241	.	-	2	Parent=FBgn0263782.1.mrna1;Target=FBgn0263782.1 503 590 +
Chr2	stalkie_big_nohaplotig	CDS	141517597	141518098	.	-	0	Parent=FBgn0263782.1.mrna1;Target=FBgn0263782.1 1 502 +
Chr2	gffcl	locus	141526621	141527859	.	+	.	ID=RLOC_00022255;geneIDs=comp145866_c0_seq1.path1;transcripts=comp145866_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141526621	141527859	.	+	.	ID=comp145866_c0_seq1.mrna1;geneID=comp145866_c0_seq1.path1;Name=comp145866_c0_seq1;Dir=antisensecoverage=99.8;identity=98.4;matches=1064;mismatches=3;indels=14;unknowns=0;locus=RLOC_00022255
Chr2	stalkie_big_nohaplotig	exon	141526621	141527043	95	+	.	Parent=comp145866_c0_seq1.mrna1;Target=comp145866_c0_seq1 661 1069 -
Chr2	stalkie_big_nohaplotig	exon	141527143	141527465	100	+	.	Parent=comp145866_c0_seq1.mrna1;Target=comp145866_c0_seq1 338 660 -
Chr2	stalkie_big_nohaplotig	exon	141527525	141527859	100	+	.	Parent=comp145866_c0_seq1.mrna1;Target=comp145866_c0_seq1 3 337 -
Chr2	stalkie_big_nohaplotig	CDS	141527318	141527465	.	+	0	Parent=comp145866_c0_seq1.mrna1;Target=comp145866_c0_seq1 338 485 .
Chr2	stalkie_big_nohaplotig	CDS	141527525	141527646	.	+	2	Parent=comp145866_c0_seq1.mrna1;Target=comp145866_c0_seq1 216 337 .
Chr2	gffcl	locus	141565464	141567810	.	+	.	ID=RLOC_00022256;geneIDs=FBgn0028691.1.path1;transcripts=FBgn0028691.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141565464	141567810	.	+	.	ID=FBgn0028691.1.mrna1;geneID=FBgn0028691.1.path1;Name=FBgn0028691.1;Dir=sensecoverage=100.0;identity=99.7;matches=1154;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022256
Chr2	stalkie_big_nohaplotig	exon	141565464	141565585	100	+	.	Parent=FBgn0028691.1.mrna1;Target=FBgn0028691.1 1 122 +
Chr2	stalkie_big_nohaplotig	exon	141565652	141565765	100	+	.	Parent=FBgn0028691.1.mrna1;Target=FBgn0028691.1 123 236 +
Chr2	stalkie_big_nohaplotig	exon	141565843	141565978	100	+	.	Parent=FBgn0028691.1.mrna1;Target=FBgn0028691.1 237 372 +
Chr2	stalkie_big_nohaplotig	exon	141566042	141566344	100	+	.	Parent=FBgn0028691.1.mrna1;Target=FBgn0028691.1 373 675 +
Chr2	stalkie_big_nohaplotig	exon	141566408	141566499	100	+	.	Parent=FBgn0028691.1.mrna1;Target=FBgn0028691.1 676 767 +
Chr2	stalkie_big_nohaplotig	exon	141566675	141566939	99	+	.	Parent=FBgn0028691.1.mrna1;Target=FBgn0028691.1 768 1032 +
Chr2	stalkie_big_nohaplotig	exon	141567685	141567810	98	+	.	Parent=FBgn0028691.1.mrna1;Target=FBgn0028691.1 1033 1158 +
Chr2	stalkie_big_nohaplotig	CDS	141565464	141565585	.	+	0	Parent=FBgn0028691.1.mrna1;Target=FBgn0028691.1 1 122 +
Chr2	stalkie_big_nohaplotig	CDS	141565652	141565765	.	+	1	Parent=FBgn0028691.1.mrna1;Target=FBgn0028691.1 123 236 +
Chr2	stalkie_big_nohaplotig	CDS	141565843	141565978	.	+	1	Parent=FBgn0028691.1.mrna1;Target=FBgn0028691.1 237 372 +
Chr2	stalkie_big_nohaplotig	CDS	141566042	141566344	.	+	0	Parent=FBgn0028691.1.mrna1;Target=FBgn0028691.1 373 675 +
Chr2	stalkie_big_nohaplotig	CDS	141566408	141566499	.	+	0	Parent=FBgn0028691.1.mrna1;Target=FBgn0028691.1 676 767 +
Chr2	stalkie_big_nohaplotig	CDS	141566675	141566939	.	+	1	Parent=FBgn0028691.1.mrna1;Target=FBgn0028691.1 768 1032 +
Chr2	stalkie_big_nohaplotig	CDS	141567685	141567810	.	+	0	Parent=FBgn0028691.1.mrna1;Target=FBgn0028691.1 1033 1158 +
Chr2	gffcl	locus	141569081	141572181	.	-	.	ID=RLOC_00022257;geneIDs=FBgn0039109.1.path1,comp159928_c0_seq1.path1;transcripts=FBgn0039109.1.mrna1,comp159928_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141569081	141572181	.	-	.	ID=FBgn0039109.1.mrna1;geneID=FBgn0039109.1.path1;Name=FBgn0039109.1;Dir=sensecoverage=100.0;identity=99.5;matches=818;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022257
Chr2	stalkie_big_nohaplotig	exon	141569081	141569514	99	-	.	Parent=FBgn0039109.1.mrna1;Target=FBgn0039109.1 389 822 +
Chr2	stalkie_big_nohaplotig	exon	141569651	141569729	98	-	.	Parent=FBgn0039109.1.mrna1;Target=FBgn0039109.1 310 388 +
Chr2	stalkie_big_nohaplotig	exon	141570871	141570906	100	-	.	Parent=FBgn0039109.1.mrna1;Target=FBgn0039109.1 274 309 +
Chr2	stalkie_big_nohaplotig	exon	141571909	141572181	99	-	.	Parent=FBgn0039109.1.mrna1;Target=FBgn0039109.1 1 273 +
Chr2	stalkie_big_nohaplotig	CDS	141569081	141569514	.	-	2	Parent=FBgn0039109.1.mrna1;Target=FBgn0039109.1 389 822 +
Chr2	stalkie_big_nohaplotig	CDS	141569651	141569729	.	-	0	Parent=FBgn0039109.1.mrna1;Target=FBgn0039109.1 310 388 +
Chr2	stalkie_big_nohaplotig	CDS	141570871	141570906	.	-	0	Parent=FBgn0039109.1.mrna1;Target=FBgn0039109.1 274 309 +
Chr2	stalkie_big_nohaplotig	CDS	141571909	141572181	.	-	0	Parent=FBgn0039109.1.mrna1;Target=FBgn0039109.1 1 273 +
Chr2	stalkie_big_nohaplotig	mRNA	141569707	141570760	.	-	.	ID=comp159928_c0_seq1.mrna1;geneID=comp159928_c0_seq1.path1;Name=comp159928_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.5;matches=1006;mismatches=47;indels=59;unknowns=0;Target=comp159928_c0_seq1 1111 1 .;CDS_Target=comp159928_c0_seq1 127 2 .;locus=RLOC_00022257
Chr2	stalkie_big_nohaplotig	exon	141569707	141570760	90	-	.	Parent=comp159928_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	141570633	141570759	.	-	0	Parent=comp159928_c0_seq1.mrna1
Chr2	gffcl	locus	141651816	141654574	.	+	.	ID=RLOC_00022258;geneIDs=FBgn0040227.1.path2;transcripts=FBgn0040227.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	141651816	141654574	.	+	.	ID=FBgn0040227.1.mrna2;geneID=FBgn0040227.1.path2;Name=FBgn0040227.1;Dir=sensecoverage=100.0;identity=99.3;matches=1662;mismatches=12;indels=0;unknowns=0;locus=RLOC_00022258
Chr2	stalkie_big_nohaplotig	exon	141651816	141652017	99	+	.	Parent=FBgn0040227.1.mrna2;Target=FBgn0040227.1 1 202 +
Chr2	stalkie_big_nohaplotig	exon	141652338	141652485	100	+	.	Parent=FBgn0040227.1.mrna2;Target=FBgn0040227.1 203 350 +
Chr2	stalkie_big_nohaplotig	exon	141652546	141653027	99	+	.	Parent=FBgn0040227.1.mrna2;Target=FBgn0040227.1 351 832 +
Chr2	stalkie_big_nohaplotig	exon	141653474	141653766	100	+	.	Parent=FBgn0040227.1.mrna2;Target=FBgn0040227.1 833 1125 +
Chr2	stalkie_big_nohaplotig	exon	141654026	141654574	98	+	.	Parent=FBgn0040227.1.mrna2;Target=FBgn0040227.1 1126 1674 +
Chr2	stalkie_big_nohaplotig	CDS	141651816	141652017	.	+	0	Parent=FBgn0040227.1.mrna2;Target=FBgn0040227.1 1 202 +
Chr2	stalkie_big_nohaplotig	CDS	141652338	141652485	.	+	2	Parent=FBgn0040227.1.mrna2;Target=FBgn0040227.1 203 350 +
Chr2	stalkie_big_nohaplotig	CDS	141652546	141653027	.	+	1	Parent=FBgn0040227.1.mrna2;Target=FBgn0040227.1 351 832 +
Chr2	stalkie_big_nohaplotig	CDS	141653474	141653766	.	+	2	Parent=FBgn0040227.1.mrna2;Target=FBgn0040227.1 833 1125 +
Chr2	stalkie_big_nohaplotig	CDS	141654026	141654574	.	+	0	Parent=FBgn0040227.1.mrna2;Target=FBgn0040227.1 1126 1674 +
Chr2	gffcl	locus	141659829	141663233	.	+	.	ID=RLOC_00022259;geneIDs=FBgn0039102.1.path1;transcripts=FBgn0039102.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141659829	141663233	.	+	.	ID=FBgn0039102.1.mrna1;geneID=FBgn0039102.1.path1;Name=FBgn0039102.1;Dir=sensecoverage=100.0;identity=99.5;matches=1212;mismatches=6;indels=0;unknowns=0;locus=RLOC_00022259
Chr2	stalkie_big_nohaplotig	exon	141659829	141659952	99	+	.	Parent=FBgn0039102.1.mrna1;Target=FBgn0039102.1 1 124 +
Chr2	stalkie_big_nohaplotig	exon	141662015	141662196	97	+	.	Parent=FBgn0039102.1.mrna1;Target=FBgn0039102.1 125 306 +
Chr2	stalkie_big_nohaplotig	exon	141662264	141662444	99	+	.	Parent=FBgn0039102.1.mrna1;Target=FBgn0039102.1 307 487 +
Chr2	stalkie_big_nohaplotig	exon	141662503	141663233	100	+	.	Parent=FBgn0039102.1.mrna1;Target=FBgn0039102.1 488 1218 +
Chr2	stalkie_big_nohaplotig	CDS	141659829	141659952	.	+	0	Parent=FBgn0039102.1.mrna1;Target=FBgn0039102.1 1 124 +
Chr2	stalkie_big_nohaplotig	CDS	141662015	141662196	.	+	2	Parent=FBgn0039102.1.mrna1;Target=FBgn0039102.1 125 306 +
Chr2	stalkie_big_nohaplotig	CDS	141662264	141662444	.	+	0	Parent=FBgn0039102.1.mrna1;Target=FBgn0039102.1 307 487 +
Chr2	stalkie_big_nohaplotig	CDS	141662503	141663233	.	+	2	Parent=FBgn0039102.1.mrna1;Target=FBgn0039102.1 488 1218 +
Chr2	gffcl	locus	141664049	141664566	.	+	.	ID=RLOC_00022260;geneIDs=comp151086_c0_seq1.path1;transcripts=comp151086_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141664049	141664566	.	+	.	ID=comp151086_c0_seq1.mrna1;geneID=comp151086_c0_seq1.path1;Name=comp151086_c0_seq1;Dir=indeterminatecoverage=92.0;identity=96.3;matches=499;mismatches=6;indels=13;unknowns=0;Target=comp151086_c0_seq1 545 41 .;CDS_Target=comp151086_c0_seq1 365 234 .;locus=RLOC_00022260
Chr2	stalkie_big_nohaplotig	exon	141664049	141664566	96	+	.	Parent=comp151086_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	141664255	141664386	.	+	0	Parent=comp151086_c0_seq1.mrna1
Chr2	gffcl	locus	141675240	141676238	.	-	.	ID=RLOC_00022262;geneIDs=FBgn0039104.1.path1;transcripts=FBgn0039104.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141675240	141676238	.	-	.	ID=FBgn0039104.1.mrna1;geneID=FBgn0039104.1.path1;Name=FBgn0039104.1;Dir=sensecoverage=100.0;identity=100.0;matches=747;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022262
Chr2	stalkie_big_nohaplotig	exon	141675240	141675498	100	-	.	Parent=FBgn0039104.1.mrna1;Target=FBgn0039104.1 489 747 +
Chr2	stalkie_big_nohaplotig	exon	141675564	141675750	100	-	.	Parent=FBgn0039104.1.mrna1;Target=FBgn0039104.1 302 488 +
Chr2	stalkie_big_nohaplotig	exon	141675867	141676088	100	-	.	Parent=FBgn0039104.1.mrna1;Target=FBgn0039104.1 80 301 +
Chr2	stalkie_big_nohaplotig	exon	141676160	141676238	100	-	.	Parent=FBgn0039104.1.mrna1;Target=FBgn0039104.1 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	141675240	141675498	.	-	1	Parent=FBgn0039104.1.mrna1;Target=FBgn0039104.1 489 747 +
Chr2	stalkie_big_nohaplotig	CDS	141675564	141675750	.	-	2	Parent=FBgn0039104.1.mrna1;Target=FBgn0039104.1 302 488 +
Chr2	stalkie_big_nohaplotig	CDS	141675867	141676088	.	-	2	Parent=FBgn0039104.1.mrna1;Target=FBgn0039104.1 80 301 +
Chr2	stalkie_big_nohaplotig	CDS	141676160	141676238	.	-	0	Parent=FBgn0039104.1.mrna1;Target=FBgn0039104.1 1 79 +
Chr2	gffcl	locus	141676521	141679763	.	-	.	ID=RLOC_00022263;geneIDs=FBgn0043005.1.path1;transcripts=FBgn0043005.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141676521	141679763	.	-	.	ID=FBgn0043005.1.mrna1;geneID=FBgn0043005.1.path1;Name=FBgn0043005.1;Dir=sensecoverage=100.0;identity=99.0;matches=1671;mismatches=15;indels=2;unknowns=0;Target=FBgn0043005.1 3 35 +;locus=RLOC_00022263
Chr2	stalkie_big_nohaplotig	exon	141676521	141676610	97	-	.	Parent=FBgn0043005.1.mrna1;Target=FBgn0043005.1 1597 1686 +
Chr2	stalkie_big_nohaplotig	exon	141677406	141677530	98	-	.	Parent=FBgn0043005.1.mrna1;Target=FBgn0043005.1 1472 1596 +
Chr2	stalkie_big_nohaplotig	exon	141677610	141677841	100	-	.	Parent=FBgn0043005.1.mrna1;Target=FBgn0043005.1 1240 1471 +
Chr2	stalkie_big_nohaplotig	exon	141677931	141678236	99	-	.	Parent=FBgn0043005.1.mrna1;Target=FBgn0043005.1 934 1239 +
Chr2	stalkie_big_nohaplotig	exon	141678593	141678633	100	-	.	Parent=FBgn0043005.1.mrna1;Target=FBgn0043005.1 893 933 +
Chr2	stalkie_big_nohaplotig	exon	141678693	141678855	98	-	.	Parent=FBgn0043005.1.mrna1;Target=FBgn0043005.1 730 892 +
Chr2	stalkie_big_nohaplotig	exon	141678936	141679039	100	-	.	Parent=FBgn0043005.1.mrna1;Target=FBgn0043005.1 626 729 +
Chr2	stalkie_big_nohaplotig	exon	141679137	141679763	98	-	.	Parent=FBgn0043005.1.mrna1;Target=FBgn0043005.1 1 625 +
Chr2	stalkie_big_nohaplotig	CDS	141679727	141679761	.	-	0	Parent=FBgn0043005.1.mrna1
Chr2	gffcl	locus	141687861	141691427	.	+	.	ID=RLOC_00022264;geneIDs=FBgn0051148.1.path1;transcripts=FBgn0051148.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141687861	141691427	.	+	.	ID=FBgn0051148.1.mrna1;geneID=FBgn0051148.1.path1;Name=FBgn0051148.1;Dir=sensecoverage=100.0;identity=99.3;matches=1320;mismatches=9;indels=0;unknowns=0;locus=RLOC_00022264
Chr2	stalkie_big_nohaplotig	exon	141687861	141687954	97	+	.	Parent=FBgn0051148.1.mrna1;Target=FBgn0051148.1 1 94 +
Chr2	stalkie_big_nohaplotig	exon	141689163	141689308	100	+	.	Parent=FBgn0051148.1.mrna1;Target=FBgn0051148.1 95 240 +
Chr2	stalkie_big_nohaplotig	exon	141689383	141689503	99	+	.	Parent=FBgn0051148.1.mrna1;Target=FBgn0051148.1 241 361 +
Chr2	stalkie_big_nohaplotig	exon	141689587	141689728	100	+	.	Parent=FBgn0051148.1.mrna1;Target=FBgn0051148.1 362 503 +
Chr2	stalkie_big_nohaplotig	exon	141689800	141690247	99	+	.	Parent=FBgn0051148.1.mrna1;Target=FBgn0051148.1 504 951 +
Chr2	stalkie_big_nohaplotig	exon	141690382	141690495	98	+	.	Parent=FBgn0051148.1.mrna1;Target=FBgn0051148.1 952 1065 +
Chr2	stalkie_big_nohaplotig	exon	141691164	141691427	99	+	.	Parent=FBgn0051148.1.mrna1;Target=FBgn0051148.1 1066 1329 +
Chr2	stalkie_big_nohaplotig	CDS	141687861	141687954	.	+	0	Parent=FBgn0051148.1.mrna1;Target=FBgn0051148.1 1 94 +
Chr2	stalkie_big_nohaplotig	CDS	141689163	141689308	.	+	2	Parent=FBgn0051148.1.mrna1;Target=FBgn0051148.1 95 240 +
Chr2	stalkie_big_nohaplotig	CDS	141689383	141689503	.	+	0	Parent=FBgn0051148.1.mrna1;Target=FBgn0051148.1 241 361 +
Chr2	stalkie_big_nohaplotig	CDS	141689587	141689728	.	+	2	Parent=FBgn0051148.1.mrna1;Target=FBgn0051148.1 362 503 +
Chr2	stalkie_big_nohaplotig	CDS	141689800	141690247	.	+	1	Parent=FBgn0051148.1.mrna1;Target=FBgn0051148.1 504 951 +
Chr2	stalkie_big_nohaplotig	CDS	141690382	141690495	.	+	0	Parent=FBgn0051148.1.mrna1;Target=FBgn0051148.1 952 1065 +
Chr2	stalkie_big_nohaplotig	CDS	141691164	141691427	.	+	0	Parent=FBgn0051148.1.mrna1;Target=FBgn0051148.1 1066 1329 +
Chr2	gffcl	locus	141694148	141699237	.	+	.	ID=RLOC_00022265;geneIDs=FBgn0051414.1.path1;transcripts=FBgn0051414.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141694148	141699237	.	+	.	ID=FBgn0051414.1.mrna1;geneID=FBgn0051414.1.path1;Name=FBgn0051414.1;Dir=sensecoverage=100.0;identity=98.8;matches=1710;mismatches=21;indels=0;unknowns=0;locus=RLOC_00022265
Chr2	stalkie_big_nohaplotig	exon	141694148	141694229	97	+	.	Parent=FBgn0051414.1.mrna1;Target=FBgn0051414.1 1 82 +
Chr2	stalkie_big_nohaplotig	exon	141694296	141694432	98	+	.	Parent=FBgn0051414.1.mrna1;Target=FBgn0051414.1 83 219 +
Chr2	stalkie_big_nohaplotig	exon	141695745	141695928	97	+	.	Parent=FBgn0051414.1.mrna1;Target=FBgn0051414.1 220 403 +
Chr2	stalkie_big_nohaplotig	exon	141696335	141696491	98	+	.	Parent=FBgn0051414.1.mrna1;Target=FBgn0051414.1 404 560 +
Chr2	stalkie_big_nohaplotig	exon	141697159	141697479	97	+	.	Parent=FBgn0051414.1.mrna1;Target=FBgn0051414.1 561 881 +
Chr2	stalkie_big_nohaplotig	exon	141697606	141697735	100	+	.	Parent=FBgn0051414.1.mrna1;Target=FBgn0051414.1 882 1011 +
Chr2	stalkie_big_nohaplotig	exon	141697891	141698004	100	+	.	Parent=FBgn0051414.1.mrna1;Target=FBgn0051414.1 1012 1125 +
Chr2	stalkie_big_nohaplotig	exon	141698132	141698474	99	+	.	Parent=FBgn0051414.1.mrna1;Target=FBgn0051414.1 1126 1468 +
Chr2	stalkie_big_nohaplotig	exon	141698535	141698700	100	+	.	Parent=FBgn0051414.1.mrna1;Target=FBgn0051414.1 1469 1634 +
Chr2	stalkie_big_nohaplotig	exon	141699141	141699237	100	+	.	Parent=FBgn0051414.1.mrna1;Target=FBgn0051414.1 1635 1731 +
Chr2	stalkie_big_nohaplotig	CDS	141694148	141694229	.	+	0	Parent=FBgn0051414.1.mrna1;Target=FBgn0051414.1 1 82 +
Chr2	stalkie_big_nohaplotig	CDS	141694296	141694432	.	+	2	Parent=FBgn0051414.1.mrna1;Target=FBgn0051414.1 83 219 +
Chr2	stalkie_big_nohaplotig	CDS	141695745	141695928	.	+	0	Parent=FBgn0051414.1.mrna1;Target=FBgn0051414.1 220 403 +
Chr2	stalkie_big_nohaplotig	CDS	141696335	141696491	.	+	2	Parent=FBgn0051414.1.mrna1;Target=FBgn0051414.1 404 560 +
Chr2	stalkie_big_nohaplotig	CDS	141697159	141697479	.	+	1	Parent=FBgn0051414.1.mrna1;Target=FBgn0051414.1 561 881 +
Chr2	stalkie_big_nohaplotig	CDS	141697606	141697735	.	+	1	Parent=FBgn0051414.1.mrna1;Target=FBgn0051414.1 882 1011 +
Chr2	stalkie_big_nohaplotig	CDS	141697891	141698004	.	+	0	Parent=FBgn0051414.1.mrna1;Target=FBgn0051414.1 1012 1125 +
Chr2	stalkie_big_nohaplotig	CDS	141698132	141698474	.	+	0	Parent=FBgn0051414.1.mrna1;Target=FBgn0051414.1 1126 1468 +
Chr2	stalkie_big_nohaplotig	CDS	141698535	141698700	.	+	2	Parent=FBgn0051414.1.mrna1;Target=FBgn0051414.1 1469 1634 +
Chr2	stalkie_big_nohaplotig	CDS	141699141	141699237	.	+	1	Parent=FBgn0051414.1.mrna1;Target=FBgn0051414.1 1635 1731 +
Chr2	gffcl	locus	141763280	141934467	.	+	.	ID=RLOC_00022267;geneIDs=ORF1435.path1,FBgn0051145.1.path1,comp148773_c0_seq1.path2;transcripts=comp148773_c0_seq1.mrna2,ORF1435.mrna1,FBgn0051145.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141763280	141880655	.	+	.	ID=comp148773_c0_seq1.mrna2;geneID=comp148773_c0_seq1.path2;Name=comp148773_c0_seq1;Dir=sensecoverage=92.8;identity=98.2;matches=551;mismatches=0;indels=10;unknowns=0;Target=comp148773_c0_seq1 40 98 +;locus=RLOC_00022267
Chr2	stalkie_big_nohaplotig	exon	141763280	141763454	97	+	.	Parent=comp148773_c0_seq1.mrna2;Target=comp148773_c0_seq1 40 218 +
Chr2	stalkie_big_nohaplotig	exon	141831517	141831559	100	+	.	Parent=comp148773_c0_seq1.mrna2;Target=comp148773_c0_seq1 219 261 +
Chr2	stalkie_big_nohaplotig	exon	141859517	141859559	100	+	.	Parent=comp148773_c0_seq1.mrna2;Target=comp148773_c0_seq1 262 304 +
Chr2	stalkie_big_nohaplotig	exon	141866077	141866189	100	+	.	Parent=comp148773_c0_seq1.mrna2;Target=comp148773_c0_seq1 305 417 +
Chr2	stalkie_big_nohaplotig	exon	141880473	141880655	96	+	.	Parent=comp148773_c0_seq1.mrna2;Target=comp148773_c0_seq1 418 594 +
Chr2	stalkie_big_nohaplotig	CDS	141763280	141763338	.	+	1	Parent=comp148773_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	141866166	141869957	.	+	.	ID=ORF1435.mrna1;geneID=ORF1435.path1;Name=ORF1435;Dir=sensecoverage=100.0;identity=100.0;matches=1104;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022267
Chr2	stalkie_big_nohaplotig	exon	141866166	141866189	100	+	.	Parent=ORF1435.mrna1;Target=ORF1435 1 24 +
Chr2	stalkie_big_nohaplotig	exon	141868878	141869957	100	+	.	Parent=ORF1435.mrna1;Target=ORF1435 25 1104 +
Chr2	stalkie_big_nohaplotig	CDS	141866166	141866189	.	+	0	Parent=ORF1435.mrna1;Target=ORF1435 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	141868878	141869957	.	+	0	Parent=ORF1435.mrna1;Target=ORF1435 25 1104 +
Chr2	stalkie_big_nohaplotig	mRNA	141880633	141934467	.	+	.	ID=FBgn0051145.1.mrna1;geneID=FBgn0051145.1.path1;Name=FBgn0051145.1;Dir=sensecoverage=100.0;identity=99.2;matches=2484;mismatches=9;indels=12;unknowns=0;locus=RLOC_00022267
Chr2	stalkie_big_nohaplotig	exon	141880633	141881750	98	+	.	Parent=FBgn0051145.1.mrna1;Target=FBgn0051145.1 1 1124 +
Chr2	stalkie_big_nohaplotig	exon	141893226	141893531	99	+	.	Parent=FBgn0051145.1.mrna1;Target=FBgn0051145.1 1125 1430 +
Chr2	stalkie_big_nohaplotig	exon	141908456	141908580	100	+	.	Parent=FBgn0051145.1.mrna1;Target=FBgn0051145.1 1431 1555 +
Chr2	stalkie_big_nohaplotig	exon	141912073	141912151	100	+	.	Parent=FBgn0051145.1.mrna1;Target=FBgn0051145.1 1556 1634 +
Chr2	stalkie_big_nohaplotig	exon	141915294	141915386	100	+	.	Parent=FBgn0051145.1.mrna1;Target=FBgn0051145.1 1635 1727 +
Chr2	stalkie_big_nohaplotig	exon	141918937	141919180	99	+	.	Parent=FBgn0051145.1.mrna1;Target=FBgn0051145.1 1728 1971 +
Chr2	stalkie_big_nohaplotig	exon	141923341	141923421	100	+	.	Parent=FBgn0051145.1.mrna1;Target=FBgn0051145.1 1972 2052 +
Chr2	stalkie_big_nohaplotig	exon	141925996	141926108	100	+	.	Parent=FBgn0051145.1.mrna1;Target=FBgn0051145.1 2053 2165 +
Chr2	stalkie_big_nohaplotig	exon	141933791	141933931	100	+	.	Parent=FBgn0051145.1.mrna1;Target=FBgn0051145.1 2166 2306 +
Chr2	stalkie_big_nohaplotig	exon	141934272	141934467	100	+	.	Parent=FBgn0051145.1.mrna1;Target=FBgn0051145.1 2307 2502 +
Chr2	stalkie_big_nohaplotig	CDS	141880633	141881750	.	+	0	Parent=FBgn0051145.1.mrna1;Target=FBgn0051145.1 1 1124 +
Chr2	stalkie_big_nohaplotig	CDS	141893226	141893531	.	+	1	Parent=FBgn0051145.1.mrna1;Target=FBgn0051145.1 1125 1430 +
Chr2	stalkie_big_nohaplotig	CDS	141908456	141908580	.	+	1	Parent=FBgn0051145.1.mrna1;Target=FBgn0051145.1 1431 1555 +
Chr2	stalkie_big_nohaplotig	CDS	141912073	141912151	.	+	2	Parent=FBgn0051145.1.mrna1;Target=FBgn0051145.1 1556 1634 +
Chr2	stalkie_big_nohaplotig	CDS	141915294	141915386	.	+	1	Parent=FBgn0051145.1.mrna1;Target=FBgn0051145.1 1635 1727 +
Chr2	stalkie_big_nohaplotig	CDS	141918937	141919180	.	+	1	Parent=FBgn0051145.1.mrna1;Target=FBgn0051145.1 1728 1971 +
Chr2	stalkie_big_nohaplotig	CDS	141923341	141923421	.	+	0	Parent=FBgn0051145.1.mrna1;Target=FBgn0051145.1 1972 2052 +
Chr2	stalkie_big_nohaplotig	CDS	141925996	141926108	.	+	0	Parent=FBgn0051145.1.mrna1;Target=FBgn0051145.1 2053 2165 +
Chr2	stalkie_big_nohaplotig	CDS	141933791	141933931	.	+	1	Parent=FBgn0051145.1.mrna1;Target=FBgn0051145.1 2166 2306 +
Chr2	stalkie_big_nohaplotig	CDS	141934272	141934467	.	+	1	Parent=FBgn0051145.1.mrna1;Target=FBgn0051145.1 2307 2502 +
Chr2	gffcl	locus	141780593	141781160	.	-	.	ID=RLOC_00022268;geneIDs=comp152232_c0_seq1.path1;transcripts=comp152232_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141780593	141781160	.	-	.	ID=comp152232_c0_seq1.mrna1;geneID=comp152232_c0_seq1.path1;Name=comp152232_c0_seq1;Dir=indeterminatecoverage=98.4;identity=96.1;matches=546;mismatches=19;indels=3;unknowns=0;Target=comp152232_c0_seq1 574 10 .;CDS_Target=comp152232_c0_seq1 566 252 .;locus=RLOC_00022268
Chr2	stalkie_big_nohaplotig	exon	141780593	141781160	96	-	.	Parent=comp152232_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	141780601	141780918	.	-	0	Parent=comp152232_c0_seq1.mrna1
Chr2	gffcl	locus	141935790	141936175	.	+	.	ID=RLOC_00022269;geneIDs=comp143168_c0_seq1.path1;transcripts=comp143168_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141935790	141936175	.	+	.	ID=comp143168_c0_seq1.mrna1;geneID=comp143168_c0_seq1.path1;Name=comp143168_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=386;mismatches=0;indels=0;unknowns=0;Target=comp143168_c0_seq1 386 1 .;CDS_Target=comp143168_c0_seq1 137 3 .;locus=RLOC_00022269
Chr2	stalkie_big_nohaplotig	exon	141935790	141936175	100	+	.	Parent=comp143168_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	141935792	141935926	.	+	0	Parent=comp143168_c0_seq1.mrna1
Chr2	gffcl	locus	141938182	141957866	.	+	.	ID=RLOC_00022270;geneIDs=FBgn0039094.1.path1;transcripts=FBgn0039094.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141938182	141957866	.	+	.	ID=FBgn0039094.1.mrna1;geneID=FBgn0039094.1.path1;Name=FBgn0039094.1;Dir=sensecoverage=99.7;identity=98.9;matches=1181;mismatches=13;indels=0;unknowns=0;locus=RLOC_00022270
Chr2	stalkie_big_nohaplotig	exon	141938182	141938206	100	+	.	Parent=FBgn0039094.1.mrna1;Target=FBgn0039094.1 4 28 +
Chr2	stalkie_big_nohaplotig	exon	141946328	141946561	97	+	.	Parent=FBgn0039094.1.mrna1;Target=FBgn0039094.1 29 262 +
Chr2	stalkie_big_nohaplotig	exon	141951686	141951760	100	+	.	Parent=FBgn0039094.1.mrna1;Target=FBgn0039094.1 263 337 +
Chr2	stalkie_big_nohaplotig	exon	141956331	141956733	99	+	.	Parent=FBgn0039094.1.mrna1;Target=FBgn0039094.1 338 740 +
Chr2	stalkie_big_nohaplotig	exon	141957007	141957143	99	+	.	Parent=FBgn0039094.1.mrna1;Target=FBgn0039094.1 741 877 +
Chr2	stalkie_big_nohaplotig	exon	141957547	141957866	99	+	.	Parent=FBgn0039094.1.mrna1;Target=FBgn0039094.1 878 1197 +
Chr2	stalkie_big_nohaplotig	CDS	141938182	141938206	.	+	0	Parent=FBgn0039094.1.mrna1;Target=FBgn0039094.1 4 28 +
Chr2	stalkie_big_nohaplotig	CDS	141946328	141946561	.	+	2	Parent=FBgn0039094.1.mrna1;Target=FBgn0039094.1 29 262 +
Chr2	stalkie_big_nohaplotig	CDS	141951686	141951760	.	+	2	Parent=FBgn0039094.1.mrna1;Target=FBgn0039094.1 263 337 +
Chr2	stalkie_big_nohaplotig	CDS	141956331	141956733	.	+	2	Parent=FBgn0039094.1.mrna1;Target=FBgn0039094.1 338 740 +
Chr2	stalkie_big_nohaplotig	CDS	141957007	141957143	.	+	1	Parent=FBgn0039094.1.mrna1;Target=FBgn0039094.1 741 877 +
Chr2	stalkie_big_nohaplotig	CDS	141957547	141957866	.	+	2	Parent=FBgn0039094.1.mrna1;Target=FBgn0039094.1 878 1197 +
Chr2	gffcl	locus	141998890	141999348	.	-	.	ID=RLOC_00022271;geneIDs=comp150199_c0_seq1.path1;transcripts=comp150199_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141998890	141999348	.	-	.	ID=comp150199_c0_seq1.mrna1;geneID=comp150199_c0_seq1.path1;Name=comp150199_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=450;mismatches=9;indels=0;unknowns=0;Target=comp150199_c0_seq1 459 1 .;CDS_Target=comp150199_c0_seq1 306 187 .;locus=RLOC_00022271
Chr2	stalkie_big_nohaplotig	exon	141998890	141999348	98	-	.	Parent=comp150199_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	141999043	141999162	.	-	0	Parent=comp150199_c0_seq1.mrna1
Chr2	gffcl	locus	141999569	142045142	.	-	.	ID=RLOC_00022272;geneIDs=FBgn0039089.1.path1;transcripts=FBgn0039089.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	141999569	142045142	.	-	.	ID=FBgn0039089.1.mrna1;geneID=FBgn0039089.1.path1;Name=FBgn0039089.1;Dir=sensecoverage=100.0;identity=99.4;matches=1410;mismatches=9;indels=0;unknowns=0;locus=RLOC_00022272
Chr2	stalkie_big_nohaplotig	exon	141999569	141999684	100	-	.	Parent=FBgn0039089.1.mrna1;Target=FBgn0039089.1 1304 1419 +
Chr2	stalkie_big_nohaplotig	exon	142002029	142002257	100	-	.	Parent=FBgn0039089.1.mrna1;Target=FBgn0039089.1 1075 1303 +
Chr2	stalkie_big_nohaplotig	exon	142021997	142022130	100	-	.	Parent=FBgn0039089.1.mrna1;Target=FBgn0039089.1 941 1074 +
Chr2	stalkie_big_nohaplotig	exon	142026518	142026653	98	-	.	Parent=FBgn0039089.1.mrna1;Target=FBgn0039089.1 805 940 +
Chr2	stalkie_big_nohaplotig	exon	142026801	142027456	99	-	.	Parent=FBgn0039089.1.mrna1;Target=FBgn0039089.1 149 804 +
Chr2	stalkie_big_nohaplotig	exon	142044995	142045142	99	-	.	Parent=FBgn0039089.1.mrna1;Target=FBgn0039089.1 1 148 +
Chr2	stalkie_big_nohaplotig	CDS	141999569	141999684	.	-	2	Parent=FBgn0039089.1.mrna1;Target=FBgn0039089.1 1304 1419 +
Chr2	stalkie_big_nohaplotig	CDS	142002029	142002257	.	-	0	Parent=FBgn0039089.1.mrna1;Target=FBgn0039089.1 1075 1303 +
Chr2	stalkie_big_nohaplotig	CDS	142021997	142022130	.	-	2	Parent=FBgn0039089.1.mrna1;Target=FBgn0039089.1 941 1074 +
Chr2	stalkie_big_nohaplotig	CDS	142026518	142026653	.	-	0	Parent=FBgn0039089.1.mrna1;Target=FBgn0039089.1 805 940 +
Chr2	stalkie_big_nohaplotig	CDS	142026801	142027456	.	-	2	Parent=FBgn0039089.1.mrna1;Target=FBgn0039089.1 149 804 +
Chr2	stalkie_big_nohaplotig	CDS	142044995	142045142	.	-	0	Parent=FBgn0039089.1.mrna1;Target=FBgn0039089.1 1 148 +
Chr2	gffcl	locus	142016027	142016637	.	+	.	ID=RLOC_00022273;geneIDs=comp154062_c0_seq1.path1;transcripts=comp154062_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142016027	142016637	.	+	.	ID=comp154062_c0_seq1.mrna1;geneID=comp154062_c0_seq1.path1;Name=comp154062_c0_seq1;Dir=indeterminatecoverage=96.1;identity=99.2;matches=606;mismatches=5;indels=0;unknowns=0;Target=comp154062_c0_seq1 632 22 .;CDS_Target=comp154062_c0_seq1 542 66 .;locus=RLOC_00022273
Chr2	stalkie_big_nohaplotig	exon	142016027	142016637	99	+	.	Parent=comp154062_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142016071	142016547	.	+	0	Parent=comp154062_c0_seq1.mrna1
Chr2	gffcl	locus	142092965	142094864	.	-	.	ID=RLOC_00022274;geneIDs=FBgn0015778.2.path1;transcripts=FBgn0015778.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142092965	142094864	.	-	.	ID=FBgn0015778.2.mrna1;geneID=FBgn0015778.2.path1;Name=FBgn0015778.2;Dir=sensecoverage=100.0;identity=99.3;matches=1582;mismatches=8;indels=3;unknowns=0;locus=RLOC_00022274
Chr2	stalkie_big_nohaplotig	exon	142092965	142093255	96	-	.	Parent=FBgn0015778.2.mrna1;Target=FBgn0015778.2 1303 1590 +
Chr2	stalkie_big_nohaplotig	exon	142093315	142093541	99	-	.	Parent=FBgn0015778.2.mrna1;Target=FBgn0015778.2 1076 1302 +
Chr2	stalkie_big_nohaplotig	exon	142093790	142094864	99	-	.	Parent=FBgn0015778.2.mrna1;Target=FBgn0015778.2 1 1075 +
Chr2	stalkie_big_nohaplotig	CDS	142092965	142093255	.	-	0	Parent=FBgn0015778.2.mrna1;Target=FBgn0015778.2 1303 1590 +
Chr2	stalkie_big_nohaplotig	CDS	142093315	142093541	.	-	2	Parent=FBgn0015778.2.mrna1;Target=FBgn0015778.2 1076 1302 +
Chr2	stalkie_big_nohaplotig	CDS	142093790	142094864	.	-	0	Parent=FBgn0015778.2.mrna1;Target=FBgn0015778.2 1 1075 +
Chr2	gffcl	locus	142097065	142102198	.	-	.	ID=RLOC_00022275;geneIDs=comp70221_c0_seq1.path1;transcripts=comp70221_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142097065	142102198	.	-	.	ID=comp70221_c0_seq1.mrna1;geneID=comp70221_c0_seq1.path1;Name=comp70221_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=561;mismatches=2;indels=0;unknowns=0;Target=comp70221_c0_seq1 359 451 .;locus=RLOC_00022275
Chr2	stalkie_big_nohaplotig	exon	142097065	142097542	99	-	.	Parent=comp70221_c0_seq1.mrna1;Target=comp70221_c0_seq1 1 478 -
Chr2	stalkie_big_nohaplotig	exon	142102114	142102198	100	-	.	Parent=comp70221_c0_seq1.mrna1;Target=comp70221_c0_seq1 479 563 -
Chr2	stalkie_big_nohaplotig	CDS	142097423	142097515	.	-	0	Parent=comp70221_c0_seq1.mrna1
Chr2	gffcl	locus	142116875	142118295	.	-	.	ID=RLOC_00022276;geneIDs=comp159801_c0_seq1.path2;transcripts=comp159801_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	142116875	142118295	.	-	.	ID=comp159801_c0_seq1.mrna2;geneID=comp159801_c0_seq1.path2;Name=comp159801_c0_seq1;Dir=antisensecoverage=92.5;identity=99.0;matches=1238;mismatches=13;indels=0;unknowns=0;Target=comp159801_c0_seq1 867 1268 .;locus=RLOC_00022276
Chr2	stalkie_big_nohaplotig	exon	142116875	142117435	99	-	.	Parent=comp159801_c0_seq1.mrna2;Target=comp159801_c0_seq1 96 656 -
Chr2	stalkie_big_nohaplotig	exon	142117504	142117647	100	-	.	Parent=comp159801_c0_seq1.mrna2;Target=comp159801_c0_seq1 657 800 -
Chr2	stalkie_big_nohaplotig	exon	142117750	142118295	98	-	.	Parent=comp159801_c0_seq1.mrna2;Target=comp159801_c0_seq1 801 1346 -
Chr2	stalkie_big_nohaplotig	CDS	142117816	142118217	.	-	2	Parent=comp159801_c0_seq1.mrna2
Chr2	gffcl	locus	142147489	142148540	.	+	.	ID=RLOC_00022277;geneIDs=comp148653_c0_seq1.path1;transcripts=comp148653_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142147489	142148540	.	+	.	ID=comp148653_c0_seq1.mrna1;geneID=comp148653_c0_seq1.path1;Name=comp148653_c0_seq1;Dir=sensecoverage=99.9;identity=97.0;matches=750;mismatches=12;indels=11;unknowns=0;Target=comp148653_c0_seq1 214 675 +;locus=RLOC_00022277
Chr2	stalkie_big_nohaplotig	exon	142147489	142147623	90	+	.	Parent=comp148653_c0_seq1.mrna1;Target=comp148653_c0_seq1 1 146 +
Chr2	stalkie_big_nohaplotig	exon	142147914	142148540	98	+	.	Parent=comp148653_c0_seq1.mrna1;Target=comp148653_c0_seq1 147 773 +
Chr2	stalkie_big_nohaplotig	CDS	142147981	142148442	.	+	0	Parent=comp148653_c0_seq1.mrna1
Chr2	gffcl	locus	142153282	142241034	.	.	.	ID=RLOC_00022278;geneIDs=comp135824_c1_seq1.path1,comp150318_c1_seq1.path1,comp152870_c0_seq1.path1;transcripts=comp150318_c1_seq1.mrna1,comp152870_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142153282	142241034	.	+	.	ID=comp150318_c1_seq1.mrna1;geneID=comp150318_c1_seq1.path1;Name=comp150318_c1_seq1;Dir=indeterminatecoverage=94.0;identity=93.2;matches=715;mismatches=25;indels=27;unknowns=0;locus=RLOC_00022278
Chr2	stalkie_big_nohaplotig	exon	142153282	142153293	83	+	.	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 61 50 .
Chr2	stalkie_big_nohaplotig	exon	142160747	142160759	92	+	.	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 74 62 .
Chr2	stalkie_big_nohaplotig	exon	142165181	142165189	88	+	.	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 83 75 .
Chr2	stalkie_big_nohaplotig	exon	142166590	142166597	75	+	.	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 91 84 .
Chr2	stalkie_big_nohaplotig	exon	142168205	142168210	100	+	.	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 97 92 .
Chr2	stalkie_big_nohaplotig	exon	142170907	142170920	78	+	.	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 111 98 .
Chr2	stalkie_big_nohaplotig	exon	142171981	142171987	100	+	.	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 118 112 .
Chr2	stalkie_big_nohaplotig	exon	142178282	142178292	90	+	.	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 129 119 .
Chr2	stalkie_big_nohaplotig	exon	142179521	142179526	100	+	.	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 135 130 .
Chr2	stalkie_big_nohaplotig	exon	142181135	142181137	100	+	.	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 138 136 .
Chr2	stalkie_big_nohaplotig	exon	142182659	142182670	83	+	.	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 150 139 .
Chr2	stalkie_big_nohaplotig	exon	142194979	142195007	55	+	.	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 190 151 .
Chr2	stalkie_big_nohaplotig	exon	142202699	142202703	100	+	.	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 195 191 .
Chr2	stalkie_big_nohaplotig	exon	142206586	142206588	100	+	.	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 198 196 .
Chr2	stalkie_big_nohaplotig	exon	142222774	142222781	100	+	.	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 206 199 .
Chr2	stalkie_big_nohaplotig	exon	142226467	142226489	55	+	.	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 242 207 .
Chr2	stalkie_big_nohaplotig	exon	142228602	142228613	91	+	.	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 254 243 .
Chr2	stalkie_big_nohaplotig	exon	142234683	142234688	100	+	.	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 260 255 .
Chr2	stalkie_big_nohaplotig	exon	142240479	142241034	99	+	.	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 813 261 .
Chr2	stalkie_big_nohaplotig	CDS	142226488	142226489	.	+	0	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 242 241 .
Chr2	stalkie_big_nohaplotig	CDS	142228602	142228613	.	+	1	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 254 243 .
Chr2	stalkie_big_nohaplotig	CDS	142234683	142234688	.	+	1	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 260 255 .
Chr2	stalkie_big_nohaplotig	CDS	142240479	142240561	.	+	1	Parent=comp150318_c1_seq1.mrna1;Target=comp150318_c1_seq1 342 261 .
Chr2	stalkie_big_nohaplotig	mRNA	142225959	142226279	.	-	.	ID=comp152870_c0_seq1.mrna1;geneID=comp152870_c0_seq1.path1;Name=comp152870_c0_seq1;Dir=indeterminatecoverage=90.9;identity=99.1;matches=318;mismatches=3;indels=0;unknowns=0;Target=comp152870_c0_seq1 321 1 .;CDS_Target=comp152870_c0_seq1 79 2 .;locus=RLOC_00022278
Chr2	stalkie_big_nohaplotig	exon	142225959	142226279	99	-	.	Parent=comp152870_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142226201	142226278	.	-	0	Parent=comp152870_c0_seq1.mrna1
Chr2	gffcl	locus	142180177	142186645	.	+	.	ID=RLOC_00022279;geneIDs=FBgn0015778.4.path1,comp160635_c1_seq1.path1;transcripts=comp160635_c1_seq1.mrna1,FBgn0015778.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142180177	142186645	.	+	.	ID=comp160635_c1_seq1.mrna1;geneID=comp160635_c1_seq1.path1;Name=comp160635_c1_seq1;Dir=sensecoverage=100.0;identity=99.0;matches=3182;mismatches=25;indels=6;unknowns=0;locus=RLOC_00022279
Chr2	stalkie_big_nohaplotig	exon	142180177	142180294	96	+	.	Parent=comp160635_c1_seq1.mrna1;Target=comp160635_c1_seq1 1 119 +
Chr2	stalkie_big_nohaplotig	exon	142180397	142180720	98	+	.	Parent=comp160635_c1_seq1.mrna1;Target=comp160635_c1_seq1 120 444 +
Chr2	stalkie_big_nohaplotig	exon	142182766	142182860	98	+	.	Parent=comp160635_c1_seq1.mrna1;Target=comp160635_c1_seq1 445 539 +
Chr2	stalkie_big_nohaplotig	exon	142182923	142183113	100	+	.	Parent=comp160635_c1_seq1.mrna1;Target=comp160635_c1_seq1 540 730 +
Chr2	stalkie_big_nohaplotig	exon	142183201	142183300	100	+	.	Parent=comp160635_c1_seq1.mrna1;Target=comp160635_c1_seq1 731 830 +
Chr2	stalkie_big_nohaplotig	exon	142183357	142184978	99	+	.	Parent=comp160635_c1_seq1.mrna1;Target=comp160635_c1_seq1 831 2455 +
Chr2	stalkie_big_nohaplotig	exon	142185042	142185486	97	+	.	Parent=comp160635_c1_seq1.mrna1;Target=comp160635_c1_seq1 2456 2901 +
Chr2	stalkie_big_nohaplotig	exon	142186269	142186462	98	+	.	Parent=comp160635_c1_seq1.mrna1;Target=comp160635_c1_seq1 2902 3095 +
Chr2	stalkie_big_nohaplotig	exon	142186528	142186645	99	+	.	Parent=comp160635_c1_seq1.mrna1;Target=comp160635_c1_seq1 3096 3213 +
Chr2	stalkie_big_nohaplotig	CDS	142183231	142183300	.	+	0	Parent=comp160635_c1_seq1.mrna1;Target=comp160635_c1_seq1 761 830 +
Chr2	stalkie_big_nohaplotig	CDS	142183357	142184978	.	+	2	Parent=comp160635_c1_seq1.mrna1;Target=comp160635_c1_seq1 831 2455 +
Chr2	stalkie_big_nohaplotig	CDS	142185042	142185448	.	+	0	Parent=comp160635_c1_seq1.mrna1;Target=comp160635_c1_seq1 2456 2863 +
Chr2	stalkie_big_nohaplotig	mRNA	142183093	142185429	.	+	.	ID=FBgn0015778.4.mrna1;geneID=FBgn0015778.4.path1;Name=FBgn0015778.4;Dir=sensecoverage=99.1;identity=99.1;matches=1937;mismatches=14;indels=3;unknowns=0;locus=RLOC_00022279
Chr2	stalkie_big_nohaplotig	exon	142183093	142183113	100	+	.	Parent=FBgn0015778.4.mrna1;Target=FBgn0015778.4 1 21 +
Chr2	stalkie_big_nohaplotig	exon	142183201	142183300	100	+	.	Parent=FBgn0015778.4.mrna1;Target=FBgn0015778.4 22 121 +
Chr2	stalkie_big_nohaplotig	exon	142183357	142184529	99	+	.	Parent=FBgn0015778.4.mrna1;Target=FBgn0015778.4 122 1297 +
Chr2	stalkie_big_nohaplotig	exon	142184593	142184697	100	+	.	Parent=FBgn0015778.4.mrna1;Target=FBgn0015778.4 1298 1402 +
Chr2	stalkie_big_nohaplotig	exon	142184815	142184978	100	+	.	Parent=FBgn0015778.4.mrna1;Target=FBgn0015778.4 1403 1566 +
Chr2	stalkie_big_nohaplotig	exon	142185042	142185429	97	+	.	Parent=FBgn0015778.4.mrna1;Target=FBgn0015778.4 1567 1954 +
Chr2	stalkie_big_nohaplotig	CDS	142183093	142183113	.	+	0	Parent=FBgn0015778.4.mrna1;Target=FBgn0015778.4 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	142183201	142183300	.	+	0	Parent=FBgn0015778.4.mrna1;Target=FBgn0015778.4 22 121 +
Chr2	stalkie_big_nohaplotig	CDS	142183357	142184529	.	+	2	Parent=FBgn0015778.4.mrna1;Target=FBgn0015778.4 122 1297 +
Chr2	stalkie_big_nohaplotig	CDS	142184593	142184697	.	+	2	Parent=FBgn0015778.4.mrna1;Target=FBgn0015778.4 1298 1402 +
Chr2	stalkie_big_nohaplotig	CDS	142184815	142184978	.	+	2	Parent=FBgn0015778.4.mrna1;Target=FBgn0015778.4 1403 1566 +
Chr2	stalkie_big_nohaplotig	CDS	142185042	142185428	.	+	0	Parent=FBgn0015778.4.mrna1;Target=FBgn0015778.4 1567 1953 +
Chr2	gffcl	locus	142188008	142188265	.	+	.	ID=RLOC_00022280;geneIDs=comp148367_c0_seq1.path1;transcripts=comp148367_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142188008	142188265	.	+	.	ID=comp148367_c0_seq1.mrna1;geneID=comp148367_c0_seq1.path1;Name=comp148367_c0_seq1;Dir=indeterminatecoverage=37.8;identity=98.8;matches=255;mismatches=3;indels=0;unknowns=0;Target=comp148367_c0_seq1 683 426 .;CDS_Target=comp148367_c0_seq1 528 427 .;locus=RLOC_00022280
Chr2	stalkie_big_nohaplotig	exon	142188008	142188265	98	+	.	Parent=comp148367_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142188009	142188110	.	+	0	Parent=comp148367_c0_seq1.mrna1
Chr2	gffcl	locus	142195418	142196834	.	-	.	ID=RLOC_00022281;geneIDs=comp157498_c0_seq1.path1;transcripts=comp157498_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142195418	142196834	.	-	.	ID=comp157498_c0_seq1.mrna1;geneID=comp157498_c0_seq1.path1;Name=comp157498_c0_seq1;Dir=indeterminatecoverage=99.2;identity=95.7;matches=797;mismatches=28;indels=8;unknowns=0;locus=RLOC_00022281
Chr2	stalkie_big_nohaplotig	exon	142195418	142195541	97	-	.	Parent=comp157498_c0_seq1.mrna1;Target=comp157498_c0_seq1 874 751 .
Chr2	stalkie_big_nohaplotig	exon	142196002	142196080	80	-	.	Parent=comp157498_c0_seq1.mrna1;Target=comp157498_c0_seq1 715 632 .
Chr2	stalkie_big_nohaplotig	exon	142196213	142196834	97	-	.	Parent=comp157498_c0_seq1.mrna1;Target=comp157498_c0_seq1 631 7 .
Chr2	stalkie_big_nohaplotig	CDS	142195520	142195541	.	-	2	Parent=comp157498_c0_seq1.mrna1;Target=comp157498_c0_seq1 772 751 .
Chr2	stalkie_big_nohaplotig	CDS	142196002	142196080	.	-	0	Parent=comp157498_c0_seq1.mrna1;Target=comp157498_c0_seq1 715 632 .
Chr2	stalkie_big_nohaplotig	CDS	142196213	142196236	.	-	0	Parent=comp157498_c0_seq1.mrna1;Target=comp157498_c0_seq1 631 608 .
Chr2	gffcl	locus	142201857	142204133	.	-	.	ID=RLOC_00022282;geneIDs=FBgn0015778.3.path1;transcripts=FBgn0015778.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142201857	142204133	.	-	.	ID=FBgn0015778.3.mrna1;geneID=FBgn0015778.3.path1;Name=FBgn0015778.3;Dir=sensecoverage=100.0;identity=98.8;matches=1871;mismatches=22;indels=0;unknowns=0;locus=RLOC_00022282
Chr2	stalkie_big_nohaplotig	exon	142201857	142202105	100	-	.	Parent=FBgn0015778.3.mrna1;Target=FBgn0015778.3 1645 1893 +
Chr2	stalkie_big_nohaplotig	exon	142202389	142202645	99	-	.	Parent=FBgn0015778.3.mrna1;Target=FBgn0015778.3 1388 1644 +
Chr2	stalkie_big_nohaplotig	exon	142202747	142204133	98	-	.	Parent=FBgn0015778.3.mrna1;Target=FBgn0015778.3 1 1387 +
Chr2	stalkie_big_nohaplotig	CDS	142201857	142202105	.	-	0	Parent=FBgn0015778.3.mrna1;Target=FBgn0015778.3 1645 1893 +
Chr2	stalkie_big_nohaplotig	CDS	142202389	142202645	.	-	2	Parent=FBgn0015778.3.mrna1;Target=FBgn0015778.3 1388 1644 +
Chr2	stalkie_big_nohaplotig	CDS	142202747	142204133	.	-	0	Parent=FBgn0015778.3.mrna1;Target=FBgn0015778.3 1 1387 +
Chr2	gffcl	locus	142206283	142206913	.	-	.	ID=RLOC_00022283;geneIDs=FBgn0051410.2.path1;transcripts=FBgn0051410.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142206283	142206913	.	-	.	ID=FBgn0051410.2.mrna1;geneID=FBgn0051410.2.path1;Name=FBgn0051410.2;Dir=sensecoverage=100.0;identity=99.6;matches=481;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022283
Chr2	stalkie_big_nohaplotig	exon	142206283	142206554	100	-	.	Parent=FBgn0051410.2.mrna1;Target=FBgn0051410.2 212 483 +
Chr2	stalkie_big_nohaplotig	exon	142206620	142206730	99	-	.	Parent=FBgn0051410.2.mrna1;Target=FBgn0051410.2 101 211 +
Chr2	stalkie_big_nohaplotig	exon	142206814	142206913	99	-	.	Parent=FBgn0051410.2.mrna1;Target=FBgn0051410.2 1 100 +
Chr2	stalkie_big_nohaplotig	CDS	142206283	142206554	.	-	2	Parent=FBgn0051410.2.mrna1;Target=FBgn0051410.2 212 483 +
Chr2	stalkie_big_nohaplotig	CDS	142206620	142206730	.	-	2	Parent=FBgn0051410.2.mrna1;Target=FBgn0051410.2 101 211 +
Chr2	stalkie_big_nohaplotig	CDS	142206814	142206913	.	-	0	Parent=FBgn0051410.2.mrna1;Target=FBgn0051410.2 1 100 +
Chr2	gffcl	locus	142217073	142220759	.	+	.	ID=RLOC_00022284;geneIDs=FBgn0038163.1.path1;transcripts=FBgn0038163.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142217073	142220759	.	+	.	ID=FBgn0038163.1.mrna1;geneID=FBgn0038163.1.path1;Name=FBgn0038163.1;Dir=sensecoverage=100.0;identity=99.7;matches=2163;mismatches=6;indels=0;unknowns=0;locus=RLOC_00022284
Chr2	stalkie_big_nohaplotig	exon	142217073	142217102	100	+	.	Parent=FBgn0038163.1.mrna1;Target=FBgn0038163.1 1 30 +
Chr2	stalkie_big_nohaplotig	exon	142217154	142217280	100	+	.	Parent=FBgn0038163.1.mrna1;Target=FBgn0038163.1 31 157 +
Chr2	stalkie_big_nohaplotig	exon	142218165	142218305	99	+	.	Parent=FBgn0038163.1.mrna1;Target=FBgn0038163.1 158 298 +
Chr2	stalkie_big_nohaplotig	exon	142218363	142218532	100	+	.	Parent=FBgn0038163.1.mrna1;Target=FBgn0038163.1 299 468 +
Chr2	stalkie_big_nohaplotig	exon	142218608	142218814	100	+	.	Parent=FBgn0038163.1.mrna1;Target=FBgn0038163.1 469 675 +
Chr2	stalkie_big_nohaplotig	exon	142218892	142219267	100	+	.	Parent=FBgn0038163.1.mrna1;Target=FBgn0038163.1 676 1051 +
Chr2	stalkie_big_nohaplotig	exon	142219334	142219544	98	+	.	Parent=FBgn0038163.1.mrna1;Target=FBgn0038163.1 1052 1262 +
Chr2	stalkie_big_nohaplotig	exon	142219713	142220159	99	+	.	Parent=FBgn0038163.1.mrna1;Target=FBgn0038163.1 1263 1709 +
Chr2	stalkie_big_nohaplotig	exon	142220240	142220616	100	+	.	Parent=FBgn0038163.1.mrna1;Target=FBgn0038163.1 1710 2086 +
Chr2	stalkie_big_nohaplotig	exon	142220677	142220759	100	+	.	Parent=FBgn0038163.1.mrna1;Target=FBgn0038163.1 2087 2169 +
Chr2	stalkie_big_nohaplotig	CDS	142217073	142217102	.	+	0	Parent=FBgn0038163.1.mrna1;Target=FBgn0038163.1 1 30 +
Chr2	stalkie_big_nohaplotig	CDS	142217154	142217280	.	+	0	Parent=FBgn0038163.1.mrna1;Target=FBgn0038163.1 31 157 +
Chr2	stalkie_big_nohaplotig	CDS	142218165	142218305	.	+	2	Parent=FBgn0038163.1.mrna1;Target=FBgn0038163.1 158 298 +
Chr2	stalkie_big_nohaplotig	CDS	142218363	142218532	.	+	2	Parent=FBgn0038163.1.mrna1;Target=FBgn0038163.1 299 468 +
Chr2	stalkie_big_nohaplotig	CDS	142218608	142218814	.	+	0	Parent=FBgn0038163.1.mrna1;Target=FBgn0038163.1 469 675 +
Chr2	stalkie_big_nohaplotig	CDS	142218892	142219267	.	+	0	Parent=FBgn0038163.1.mrna1;Target=FBgn0038163.1 676 1051 +
Chr2	stalkie_big_nohaplotig	CDS	142219334	142219544	.	+	2	Parent=FBgn0038163.1.mrna1;Target=FBgn0038163.1 1052 1262 +
Chr2	stalkie_big_nohaplotig	CDS	142219713	142220159	.	+	1	Parent=FBgn0038163.1.mrna1;Target=FBgn0038163.1 1263 1709 +
Chr2	stalkie_big_nohaplotig	CDS	142220240	142220616	.	+	1	Parent=FBgn0038163.1.mrna1;Target=FBgn0038163.1 1710 2086 +
Chr2	stalkie_big_nohaplotig	CDS	142220677	142220759	.	+	2	Parent=FBgn0038163.1.mrna1;Target=FBgn0038163.1 2087 2169 +
Chr2	gffcl	locus	142222327	142275918	.	-	.	ID=RLOC_00022285;geneIDs=comp60527_c0_seq1.path1,comp162976_c0_seq1.path1,comp163406_c0_seq1.path1;transcripts=comp60527_c0_seq1.mrna1,comp162976_c0_seq1.mrna1,comp163406_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142222327	142275918	.	-	.	ID=comp60527_c0_seq1.mrna1;geneID=comp60527_c0_seq1.path1;Name=comp60527_c0_seq1;Dir=indeterminatecoverage=83.5;identity=100.0;matches=464;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022285
Chr2	stalkie_big_nohaplotig	exon	142222327	142222769	100	-	.	Parent=comp60527_c0_seq1.mrna1;Target=comp60527_c0_seq1 556 114 .
Chr2	stalkie_big_nohaplotig	exon	142238890	142238891	100	-	.	Parent=comp60527_c0_seq1.mrna1;Target=comp60527_c0_seq1 113 112 .
Chr2	stalkie_big_nohaplotig	exon	142246658	142246661	100	-	.	Parent=comp60527_c0_seq1.mrna1;Target=comp60527_c0_seq1 111 108 .
Chr2	stalkie_big_nohaplotig	exon	142259757	142259760	100	-	.	Parent=comp60527_c0_seq1.mrna1;Target=comp60527_c0_seq1 107 104 .
Chr2	stalkie_big_nohaplotig	exon	142266429	142266433	100	-	.	Parent=comp60527_c0_seq1.mrna1;Target=comp60527_c0_seq1 103 99 .
Chr2	stalkie_big_nohaplotig	exon	142275913	142275918	100	-	.	Parent=comp60527_c0_seq1.mrna1;Target=comp60527_c0_seq1 98 93 .
Chr2	stalkie_big_nohaplotig	CDS	142222735	142222769	.	-	2	Parent=comp60527_c0_seq1.mrna1;Target=comp60527_c0_seq1 148 114 .
Chr2	stalkie_big_nohaplotig	CDS	142238890	142238891	.	-	1	Parent=comp60527_c0_seq1.mrna1;Target=comp60527_c0_seq1 113 112 .
Chr2	stalkie_big_nohaplotig	CDS	142246658	142246661	.	-	2	Parent=comp60527_c0_seq1.mrna1;Target=comp60527_c0_seq1 111 108 .
Chr2	stalkie_big_nohaplotig	CDS	142259757	142259760	.	-	0	Parent=comp60527_c0_seq1.mrna1;Target=comp60527_c0_seq1 107 104 .
Chr2	stalkie_big_nohaplotig	CDS	142266429	142266433	.	-	2	Parent=comp60527_c0_seq1.mrna1;Target=comp60527_c0_seq1 103 99 .
Chr2	stalkie_big_nohaplotig	CDS	142275913	142275916	.	-	0	Parent=comp60527_c0_seq1.mrna1;Target=comp60527_c0_seq1 98 95 .
Chr2	stalkie_big_nohaplotig	mRNA	142258770	142262475	.	-	.	ID=comp162976_c0_seq1.mrna1;geneID=comp162976_c0_seq1.path1;Name=comp162976_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=3659;mismatches=17;indels=49;unknowns=0;Target=comp162976_c0_seq1 3695 1 .;CDS_Target=comp162976_c0_seq1 205 50 .;locus=RLOC_00022285
Chr2	stalkie_big_nohaplotig	exon	142258770	142262475	98	-	.	Parent=comp162976_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142262271	142262426	.	-	0	Parent=comp162976_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142266271	142268873	.	-	.	ID=comp163406_c0_seq1.mrna1;geneID=comp163406_c0_seq1.path1;Name=comp163406_c0_seq1;Dir=indeterminatecoverage=99.4;identity=98.1;matches=2437;mismatches=34;indels=14;unknowns=0;Target=comp163406_c0_seq1 2230 2099 .;locus=RLOC_00022285
Chr2	stalkie_big_nohaplotig	exon	142266271	142266760	99	-	.	Parent=comp163406_c0_seq1.mrna1;Target=comp163406_c0_seq1 2487 1998 .
Chr2	stalkie_big_nohaplotig	exon	142266880	142268873	97	-	.	Parent=comp163406_c0_seq1.mrna1;Target=comp163406_c0_seq1 1997 16 .
Chr2	stalkie_big_nohaplotig	CDS	142266528	142266659	.	-	0	Parent=comp163406_c0_seq1.mrna1
Chr2	gffcl	locus	142225006	142225206	.	-	.	ID=RLOC_00022286;geneIDs=comp98523_c0_seq1.path1;transcripts=comp98523_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142225006	142225206	.	-	.	ID=comp98523_c0_seq1.mrna1;geneID=comp98523_c0_seq1.path1;Name=comp98523_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=199;mismatches=2;indels=0;unknowns=0;Target=comp98523_c0_seq1 201 1 .;CDS_Target=comp98523_c0_seq1 199 74 .;locus=RLOC_00022286
Chr2	stalkie_big_nohaplotig	exon	142225006	142225206	99	-	.	Parent=comp98523_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142225008	142225133	.	-	0	Parent=comp98523_c0_seq1.mrna1
Chr2	gffcl	locus	142227248	142228675	.	-	.	ID=RLOC_00022287;geneIDs=comp159894_c1_seq1.path1;transcripts=comp159894_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142227248	142228675	.	-	.	ID=comp159894_c1_seq1.mrna1;geneID=comp159894_c1_seq1.path1;Name=comp159894_c1_seq1;Dir=indeterminatecoverage=100.0;identity=96.3;matches=1364;mismatches=45;indels=8;unknowns=0;Target=comp159894_c1_seq1 1094 915 .;locus=RLOC_00022287
Chr2	stalkie_big_nohaplotig	exon	142227248	142227784	93	-	.	Parent=comp159894_c1_seq1.mrna1;Target=comp159894_c1_seq1 1417 880 .
Chr2	stalkie_big_nohaplotig	exon	142227804	142228675	97	-	.	Parent=comp159894_c1_seq1.mrna1;Target=comp159894_c1_seq1 879 1 .
Chr2	stalkie_big_nohaplotig	CDS	142227571	142227749	.	-	0	Parent=comp159894_c1_seq1.mrna1
Chr2	gffcl	locus	142230338	142241347	.	-	.	ID=RLOC_00022288;geneIDs=FBgn0263396.1.path1,comp158423_c0_seq1.path1;transcripts=comp158423_c0_seq1.mrna1,FBgn0263396.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142230338	142233592	.	-	.	ID=comp158423_c0_seq1.mrna1;geneID=comp158423_c0_seq1.path1;Name=comp158423_c0_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=3044;mismatches=8;indels=10;unknowns=0;Target=comp158423_c0_seq1 2 166 +;locus=RLOC_00022288
Chr2	stalkie_big_nohaplotig	exon	142230338	142233164	99	-	.	Parent=comp158423_c0_seq1.mrna1;Target=comp158423_c0_seq1 228 3060 +
Chr2	stalkie_big_nohaplotig	exon	142233366	142233592	100	-	.	Parent=comp158423_c0_seq1.mrna1;Target=comp158423_c0_seq1 1 227 +
Chr2	stalkie_big_nohaplotig	CDS	142233427	142233591	.	-	0	Parent=comp158423_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142233482	142241347	.	-	.	ID=FBgn0263396.1.mrna1;geneID=FBgn0263396.1.path1;Name=FBgn0263396.1;Dir=sensecoverage=100.0;identity=100.0;matches=942;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022288
Chr2	stalkie_big_nohaplotig	exon	142233482	142233717	100	-	.	Parent=FBgn0263396.1.mrna1;Target=FBgn0263396.1 707 942 +
Chr2	stalkie_big_nohaplotig	exon	142234352	142234583	100	-	.	Parent=FBgn0263396.1.mrna1;Target=FBgn0263396.1 475 706 +
Chr2	stalkie_big_nohaplotig	exon	142235604	142235878	100	-	.	Parent=FBgn0263396.1.mrna1;Target=FBgn0263396.1 200 474 +
Chr2	stalkie_big_nohaplotig	exon	142235944	142235984	100	-	.	Parent=FBgn0263396.1.mrna1;Target=FBgn0263396.1 159 199 +
Chr2	stalkie_big_nohaplotig	exon	142241190	142241347	100	-	.	Parent=FBgn0263396.1.mrna1;Target=FBgn0263396.1 1 158 +
Chr2	stalkie_big_nohaplotig	CDS	142233482	142233717	.	-	2	Parent=FBgn0263396.1.mrna1;Target=FBgn0263396.1 707 942 +
Chr2	stalkie_big_nohaplotig	CDS	142234352	142234583	.	-	0	Parent=FBgn0263396.1.mrna1;Target=FBgn0263396.1 475 706 +
Chr2	stalkie_big_nohaplotig	CDS	142235604	142235878	.	-	2	Parent=FBgn0263396.1.mrna1;Target=FBgn0263396.1 200 474 +
Chr2	stalkie_big_nohaplotig	CDS	142235944	142235984	.	-	1	Parent=FBgn0263396.1.mrna1;Target=FBgn0263396.1 159 199 +
Chr2	stalkie_big_nohaplotig	CDS	142241190	142241347	.	-	0	Parent=FBgn0263396.1.mrna1;Target=FBgn0263396.1 1 158 +
Chr2	gffcl	locus	142249632	142251065	.	+	.	ID=RLOC_00022289;geneIDs=FBgn0015778.1.path1;transcripts=FBgn0015778.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142249632	142251065	.	+	.	ID=FBgn0015778.1.mrna1;geneID=FBgn0015778.1.path1;Name=FBgn0015778.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1428;mismatches=6;indels=0;unknowns=0;Target=FBgn0015778.1 1434 1 .;locus=RLOC_00022289
Chr2	stalkie_big_nohaplotig	exon	142249632	142251065	99	+	.	Parent=FBgn0015778.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142249632	142251065	.	+	0	Parent=FBgn0015778.1.mrna1
Chr2	gffcl	locus	142264682	142265208	.	-	.	ID=RLOC_00022290;geneIDs=comp154999_c0_seq1.path1;transcripts=comp154999_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142264682	142265208	.	-	.	ID=comp154999_c0_seq1.mrna1;geneID=comp154999_c0_seq1.path1;Name=comp154999_c0_seq1;Dir=indeterminatecoverage=100.0;identity=85.1;matches=493;mismatches=28;indels=58;unknowns=0;Target=comp154999_c0_seq1 573 1 .;CDS_Target=comp154999_c0_seq1 426 391 .;locus=RLOC_00022290
Chr2	stalkie_big_nohaplotig	exon	142264682	142265208	85	-	.	Parent=comp154999_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142264808	142264849	.	-	0	Parent=comp154999_c0_seq1.mrna1
Chr2	gffcl	locus	142269459	142272651	.	-	.	ID=RLOC_00022291;geneIDs=FBgn0004903.2.path1;transcripts=FBgn0004903.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142269459	142272651	.	-	.	ID=FBgn0004903.2.mrna1;geneID=FBgn0004903.2.path1;Name=FBgn0004903.2;Dir=sensecoverage=100.0;identity=97.4;matches=1184;mismatches=10;indels=21;unknowns=0;locus=RLOC_00022291
Chr2	stalkie_big_nohaplotig	exon	142269459	142269583	100	-	.	Parent=FBgn0004903.2.mrna1;Target=FBgn0004903.2 1118 1242 +
Chr2	stalkie_big_nohaplotig	exon	142270030	142270587	100	-	.	Parent=FBgn0004903.2.mrna1;Target=FBgn0004903.2 560 1117 +
Chr2	stalkie_big_nohaplotig	exon	142271483	142271681	86	-	.	Parent=FBgn0004903.2.mrna1;Target=FBgn0004903.2 338 553 +
Chr2	stalkie_big_nohaplotig	exon	142272106	142272338	99	-	.	Parent=FBgn0004903.2.mrna1;Target=FBgn0004903.2 82 314 +
Chr2	stalkie_big_nohaplotig	exon	142272571	142272651	98	-	.	Parent=FBgn0004903.2.mrna1;Target=FBgn0004903.2 1 81 +
Chr2	stalkie_big_nohaplotig	CDS	142270519	142270587	.	-	2	Parent=FBgn0004903.2.mrna1;Target=FBgn0004903.2 560 628 +
Chr2	stalkie_big_nohaplotig	CDS	142271483	142271507	.	-	0	Parent=FBgn0004903.2.mrna1;Target=FBgn0004903.2 530 553 +
Chr2	gffcl	locus	142275749	142283144	.	+	.	ID=RLOC_00022292;geneIDs=comp161408_c3_seq1.path1,comp163305_c2_seq1.path1;transcripts=comp163305_c2_seq1.mrna1,comp161408_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142275749	142283144	.	+	.	ID=comp163305_c2_seq1.mrna1;geneID=comp163305_c2_seq1.path1;Name=comp163305_c2_seq1;Dir=antisensecoverage=99.3;identity=97.8;matches=4142;mismatches=46;indels=48;unknowns=0;Target=comp163305_c2_seq1 4047 4085 .;locus=RLOC_00022292
Chr2	stalkie_big_nohaplotig	exon	142275749	142275981	97	+	.	Parent=comp163305_c2_seq1.mrna1;Target=comp163305_c2_seq1 4022 4258 -
Chr2	stalkie_big_nohaplotig	exon	142276129	142276606	99	+	.	Parent=comp163305_c2_seq1.mrna1;Target=comp163305_c2_seq1 3543 4021 -
Chr2	stalkie_big_nohaplotig	exon	142277371	142277910	99	+	.	Parent=comp163305_c2_seq1.mrna1;Target=comp163305_c2_seq1 3003 3542 -
Chr2	stalkie_big_nohaplotig	exon	142278565	142278654	100	+	.	Parent=comp163305_c2_seq1.mrna1;Target=comp163305_c2_seq1 2913 3002 -
Chr2	stalkie_big_nohaplotig	exon	142280290	142283144	97	+	.	Parent=comp163305_c2_seq1.mrna1;Target=comp163305_c2_seq1 31 2912 -
Chr2	stalkie_big_nohaplotig	CDS	142275919	142275956	.	+	0	Parent=comp163305_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142277890	142278586	.	+	.	ID=comp161408_c3_seq1.mrna1;geneID=comp161408_c3_seq1.path1;Name=comp161408_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=693;mismatches=4;indels=0;unknowns=0;Target=comp161408_c3_seq1 697 1 .;CDS_Target=comp161408_c3_seq1 601 494 .;locus=RLOC_00022292
Chr2	stalkie_big_nohaplotig	exon	142277890	142278586	99	+	.	Parent=comp161408_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142278383	142278490	.	+	0	Parent=comp161408_c3_seq1.mrna1
Chr2	gffcl	locus	142287988	142288428	.	-	.	ID=RLOC_00022293;geneIDs=FBgn0261792.1.path1;transcripts=FBgn0261792.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142287988	142288428	.	-	.	ID=FBgn0261792.1.mrna1;geneID=FBgn0261792.1.path1;Name=FBgn0261792.1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=437;mismatches=4;indels=0;unknowns=0;Target=FBgn0261792.1 441 1 .;locus=RLOC_00022293
Chr2	stalkie_big_nohaplotig	exon	142287988	142288428	99	-	.	Parent=FBgn0261792.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142287988	142288428	.	-	0	Parent=FBgn0261792.1.mrna1
Chr2	gffcl	locus	142289861	142292304	.	+	.	ID=RLOC_00022294;geneIDs=FBgn0039589.1.path1;transcripts=FBgn0039589.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142289861	142292304	.	+	.	ID=FBgn0039589.1.mrna1;geneID=FBgn0039589.1.path1;Name=FBgn0039589.1;Dir=sensecoverage=100.0;identity=98.6;matches=1641;mismatches=24;indels=0;unknowns=0;locus=RLOC_00022294
Chr2	stalkie_big_nohaplotig	exon	142289861	142290071	96	+	.	Parent=FBgn0039589.1.mrna1;Target=FBgn0039589.1 1 211 +
Chr2	stalkie_big_nohaplotig	exon	142290131	142290344	97	+	.	Parent=FBgn0039589.1.mrna1;Target=FBgn0039589.1 212 425 +
Chr2	stalkie_big_nohaplotig	exon	142290427	142290598	100	+	.	Parent=FBgn0039589.1.mrna1;Target=FBgn0039589.1 426 597 +
Chr2	stalkie_big_nohaplotig	exon	142290660	142290979	99	+	.	Parent=FBgn0039589.1.mrna1;Target=FBgn0039589.1 598 917 +
Chr2	stalkie_big_nohaplotig	exon	142291036	142291177	99	+	.	Parent=FBgn0039589.1.mrna1;Target=FBgn0039589.1 918 1059 +
Chr2	stalkie_big_nohaplotig	exon	142291237	142291724	98	+	.	Parent=FBgn0039589.1.mrna1;Target=FBgn0039589.1 1060 1547 +
Chr2	stalkie_big_nohaplotig	exon	142292187	142292304	99	+	.	Parent=FBgn0039589.1.mrna1;Target=FBgn0039589.1 1548 1665 +
Chr2	stalkie_big_nohaplotig	CDS	142289897	142290071	.	+	0	Parent=FBgn0039589.1.mrna1;Target=FBgn0039589.1 37 211 +
Chr2	stalkie_big_nohaplotig	CDS	142290131	142290344	.	+	2	Parent=FBgn0039589.1.mrna1;Target=FBgn0039589.1 212 425 +
Chr2	stalkie_big_nohaplotig	CDS	142290427	142290598	.	+	1	Parent=FBgn0039589.1.mrna1;Target=FBgn0039589.1 426 597 +
Chr2	stalkie_big_nohaplotig	CDS	142290660	142290979	.	+	0	Parent=FBgn0039589.1.mrna1;Target=FBgn0039589.1 598 917 +
Chr2	stalkie_big_nohaplotig	CDS	142291036	142291177	.	+	1	Parent=FBgn0039589.1.mrna1;Target=FBgn0039589.1 918 1059 +
Chr2	stalkie_big_nohaplotig	CDS	142291237	142291724	.	+	0	Parent=FBgn0039589.1.mrna1;Target=FBgn0039589.1 1060 1547 +
Chr2	stalkie_big_nohaplotig	CDS	142292187	142292304	.	+	1	Parent=FBgn0039589.1.mrna1;Target=FBgn0039589.1 1548 1665 +
Chr2	gffcl	locus	142293689	142511615	.	-	.	ID=RLOC_00022295;geneIDs=comp157267_c0_seq1.path1,comp160062_c0_seq1.path1;transcripts=comp160062_c0_seq1.mrna1,comp157267_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142293689	142511451	.	-	.	ID=comp160062_c0_seq1.mrna1;geneID=comp160062_c0_seq1.path1;Name=comp160062_c0_seq1;Dir=indeterminatecoverage=69.7;identity=95.6;matches=912;mismatches=18;indels=24;unknowns=0;Target=comp160062_c0_seq1 1129 1055 .;locus=RLOC_00022295
Chr2	stalkie_big_nohaplotig	exon	142293689	142294338	99	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 1338 690 .
Chr2	stalkie_big_nohaplotig	exon	142309683	142309687	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 689 685 .
Chr2	stalkie_big_nohaplotig	exon	142314511	142314514	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 684 681 .
Chr2	stalkie_big_nohaplotig	exon	142318035	142318043	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 680 672 .
Chr2	stalkie_big_nohaplotig	exon	142323923	142323924	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 671 670 .
Chr2	stalkie_big_nohaplotig	exon	142324659	142324688	57	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 669 637 .
Chr2	stalkie_big_nohaplotig	exon	142328996	142329002	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 636 630 .
Chr2	stalkie_big_nohaplotig	exon	142344870	142344875	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 629 624 .
Chr2	stalkie_big_nohaplotig	exon	142345537	142345550	86	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 623 609 .
Chr2	stalkie_big_nohaplotig	exon	142350016	142350024	77	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 608 600 .
Chr2	stalkie_big_nohaplotig	exon	142365084	142365087	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 599 596 .
Chr2	stalkie_big_nohaplotig	exon	142384733	142384740	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 595 588 .
Chr2	stalkie_big_nohaplotig	exon	142390655	142390659	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 587 583 .
Chr2	stalkie_big_nohaplotig	exon	142406474	142406479	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 582 577 .
Chr2	stalkie_big_nohaplotig	exon	142409320	142409324	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 576 572 .
Chr2	stalkie_big_nohaplotig	exon	142413256	142413261	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 571 566 .
Chr2	stalkie_big_nohaplotig	exon	142417648	142417652	80	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 565 561 .
Chr2	stalkie_big_nohaplotig	exon	142418317	142418323	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 560 554 .
Chr2	stalkie_big_nohaplotig	exon	142420835	142420856	67	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 553 527 .
Chr2	stalkie_big_nohaplotig	exon	142435000	142435006	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 526 520 .
Chr2	stalkie_big_nohaplotig	exon	142440060	142440069	90	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 519 510 .
Chr2	stalkie_big_nohaplotig	exon	142456074	142456112	80	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 509 471 .
Chr2	stalkie_big_nohaplotig	exon	142459083	142459090	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 470 463 .
Chr2	stalkie_big_nohaplotig	exon	142460248	142460251	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 462 459 .
Chr2	stalkie_big_nohaplotig	exon	142461873	142461874	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 458 457 .
Chr2	stalkie_big_nohaplotig	exon	142466626	142466632	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 456 450 .
Chr2	stalkie_big_nohaplotig	exon	142466689	142466700	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 449 438 .
Chr2	stalkie_big_nohaplotig	exon	142471351	142471359	88	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 437 429 .
Chr2	stalkie_big_nohaplotig	exon	142478046	142478048	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 428 426 .
Chr2	stalkie_big_nohaplotig	exon	142483595	142483599	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 425 421 .
Chr2	stalkie_big_nohaplotig	exon	142499543	142499549	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 420 414 .
Chr2	stalkie_big_nohaplotig	exon	142505800	142505803	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 413 410 .
Chr2	stalkie_big_nohaplotig	exon	142509610	142509618	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 409 401 .
Chr2	stalkie_big_nohaplotig	exon	142511140	142511141	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 400 399 .
Chr2	stalkie_big_nohaplotig	exon	142511446	142511451	100	-	.	Parent=comp160062_c0_seq1.mrna1;Target=comp160062_c0_seq1 398 393 .
Chr2	stalkie_big_nohaplotig	CDS	142293898	142293972	.	-	0	Parent=comp160062_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142510619	142511615	.	-	.	ID=comp157267_c0_seq1.mrna1;geneID=comp157267_c0_seq1.path1;Name=comp157267_c0_seq1;Dir=antisensecoverage=98.7;identity=96.9;matches=915;mismatches=29;indels=0;unknowns=0;locus=RLOC_00022295
Chr2	stalkie_big_nohaplotig	exon	142510619	142511139	95	-	.	Parent=comp157267_c0_seq1.mrna1;Target=comp157267_c0_seq1 4 524 -
Chr2	stalkie_big_nohaplotig	exon	142511193	142511615	98	-	.	Parent=comp157267_c0_seq1.mrna1;Target=comp157267_c0_seq1 525 947 -
Chr2	stalkie_big_nohaplotig	CDS	142511136	142511139	.	-	1	Parent=comp157267_c0_seq1.mrna1;Target=comp157267_c0_seq1 521 524 .
Chr2	stalkie_big_nohaplotig	CDS	142511193	142511614	.	-	0	Parent=comp157267_c0_seq1.mrna1;Target=comp157267_c0_seq1 525 946 .
Chr2	gffcl	locus	142294943	142295621	.	-	.	ID=RLOC_00022296;geneIDs=comp154202_c0_seq1.path1;transcripts=comp154202_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142294943	142295621	.	-	.	ID=comp154202_c0_seq1.mrna1;geneID=comp154202_c0_seq1.path1;Name=comp154202_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.5;matches=636;mismatches=39;indels=28;unknowns=0;Target=comp154202_c0_seq1 699 1 .;CDS_Target=comp154202_c0_seq1 597 526 .;locus=RLOC_00022296
Chr2	stalkie_big_nohaplotig	exon	142294943	142295621	90	-	.	Parent=comp154202_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142295046	142295117	.	-	0	Parent=comp154202_c0_seq1.mrna1
Chr2	gffcl	locus	142296672	142304197	.	-	.	ID=RLOC_00022297;geneIDs=FBgn0039590.1.path1;transcripts=FBgn0039590.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142296672	142304197	.	-	.	ID=FBgn0039590.1.mrna1;geneID=FBgn0039590.1.path1;Name=FBgn0039590.1;Dir=sensecoverage=100.0;identity=99.4;matches=6611;mismatches=43;indels=0;unknowns=0;locus=RLOC_00022297
Chr2	stalkie_big_nohaplotig	exon	142296672	142296852	100	-	.	Parent=FBgn0039590.1.mrna1;Target=FBgn0039590.1 6474 6654 +
Chr2	stalkie_big_nohaplotig	exon	142296909	142297203	98	-	.	Parent=FBgn0039590.1.mrna1;Target=FBgn0039590.1 6179 6473 +
Chr2	stalkie_big_nohaplotig	exon	142297464	142297653	98	-	.	Parent=FBgn0039590.1.mrna1;Target=FBgn0039590.1 5989 6178 +
Chr2	stalkie_big_nohaplotig	exon	142297717	142298054	99	-	.	Parent=FBgn0039590.1.mrna1;Target=FBgn0039590.1 5651 5988 +
Chr2	stalkie_big_nohaplotig	exon	142298131	142298436	99	-	.	Parent=FBgn0039590.1.mrna1;Target=FBgn0039590.1 5345 5650 +
Chr2	stalkie_big_nohaplotig	exon	142298490	142300137	99	-	.	Parent=FBgn0039590.1.mrna1;Target=FBgn0039590.1 3697 5344 +
Chr2	stalkie_big_nohaplotig	exon	142300502	142304197	99	-	.	Parent=FBgn0039590.1.mrna1;Target=FBgn0039590.1 1 3696 +
Chr2	stalkie_big_nohaplotig	CDS	142296672	142296852	.	-	1	Parent=FBgn0039590.1.mrna1;Target=FBgn0039590.1 6474 6654 +
Chr2	stalkie_big_nohaplotig	CDS	142296909	142297203	.	-	2	Parent=FBgn0039590.1.mrna1;Target=FBgn0039590.1 6179 6473 +
Chr2	stalkie_big_nohaplotig	CDS	142297464	142297653	.	-	0	Parent=FBgn0039590.1.mrna1;Target=FBgn0039590.1 5989 6178 +
Chr2	stalkie_big_nohaplotig	CDS	142297717	142298054	.	-	2	Parent=FBgn0039590.1.mrna1;Target=FBgn0039590.1 5651 5988 +
Chr2	stalkie_big_nohaplotig	CDS	142298131	142298436	.	-	2	Parent=FBgn0039590.1.mrna1;Target=FBgn0039590.1 5345 5650 +
Chr2	stalkie_big_nohaplotig	CDS	142298490	142300137	.	-	0	Parent=FBgn0039590.1.mrna1;Target=FBgn0039590.1 3697 5344 +
Chr2	stalkie_big_nohaplotig	CDS	142300502	142304197	.	-	0	Parent=FBgn0039590.1.mrna1;Target=FBgn0039590.1 1 3696 +
Chr2	gffcl	locus	142337763	142339805	.	+	.	ID=RLOC_00022298;geneIDs=FBgn0259716.2.path1;transcripts=FBgn0259716.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142337763	142339805	.	+	.	ID=FBgn0259716.2.mrna1;geneID=FBgn0259716.2.path1;Name=FBgn0259716.2;Dir=indeterminatecoverage=100.0;identity=99.1;matches=2025;mismatches=18;indels=0;unknowns=0;Target=FBgn0259716.2 2043 1 .;locus=RLOC_00022298
Chr2	stalkie_big_nohaplotig	exon	142337763	142339805	99	+	.	Parent=FBgn0259716.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142337763	142339805	.	+	0	Parent=FBgn0259716.2.mrna1
Chr2	gffcl	locus	142395420	142396205	.	-	.	ID=RLOC_00022299;geneIDs=comp151781_c0_seq1.path1;transcripts=comp151781_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142395420	142396205	.	-	.	ID=comp151781_c0_seq1.mrna1;geneID=comp151781_c0_seq1.path1;Name=comp151781_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=778;mismatches=5;indels=4;unknowns=0;Target=comp151781_c0_seq1 784 1 .;CDS_Target=comp151781_c0_seq1 88 2 .;locus=RLOC_00022299
Chr2	stalkie_big_nohaplotig	exon	142395420	142396205	98	-	.	Parent=comp151781_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142396118	142396204	.	-	0	Parent=comp151781_c0_seq1.mrna1
Chr2	gffcl	locus	142436689	142437852	.	-	.	ID=RLOC_00022300;geneIDs=comp113798_c0_seq1.path1;transcripts=comp113798_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142436689	142437852	.	-	.	ID=comp113798_c0_seq1.mrna1;geneID=comp113798_c0_seq1.path1;Name=comp113798_c0_seq1;Dir=antisensecoverage=100.0;identity=99.2;matches=1091;mismatches=8;indels=1;unknowns=0;Target=comp113798_c0_seq1 2 178 .;locus=RLOC_00022300
Chr2	stalkie_big_nohaplotig	exon	142436689	142436927	99	-	.	Parent=comp113798_c0_seq1.mrna1;Target=comp113798_c0_seq1 1 239 -
Chr2	stalkie_big_nohaplotig	exon	142436992	142437852	99	-	.	Parent=comp113798_c0_seq1.mrna1;Target=comp113798_c0_seq1 240 1099 -
Chr2	stalkie_big_nohaplotig	CDS	142436690	142436866	.	-	0	Parent=comp113798_c0_seq1.mrna1
Chr2	gffcl	locus	142485242	142486606	.	+	.	ID=RLOC_00022302;geneIDs=ORF885.path1;transcripts=ORF885.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142485242	142486606	.	+	.	ID=ORF885.mrna1;geneID=ORF885.path1;Name=ORF885;Dir=indeterminatecoverage=100.0;identity=98.0;matches=1338;mismatches=27;indels=0;unknowns=0;Target=ORF885 1365 1 .;locus=RLOC_00022302
Chr2	stalkie_big_nohaplotig	exon	142485242	142486606	98	+	.	Parent=ORF885.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142485242	142486606	.	+	0	Parent=ORF885.mrna1
Chr2	gffcl	locus	142509464	142510563	.	+	.	ID=RLOC_00022303;geneIDs=comp121453_c0_seq1.path1;transcripts=comp121453_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142509464	142510563	.	+	.	ID=comp121453_c0_seq1.mrna1;geneID=comp121453_c0_seq1.path1;Name=comp121453_c0_seq1;Dir=indeterminatecoverage=93.1;identity=91.1;matches=553;mismatches=22;indels=32;unknowns=0;Target=comp121453_c0_seq1 518 450 .;locus=RLOC_00022303
Chr2	stalkie_big_nohaplotig	exon	142509464	142509730	95	+	.	Parent=comp121453_c0_seq1.mrna1;Target=comp121453_c0_seq1 279 13 .
Chr2	stalkie_big_nohaplotig	exon	142510227	142510563	87	+	.	Parent=comp121453_c0_seq1.mrna1;Target=comp121453_c0_seq1 590 280 .
Chr2	stalkie_big_nohaplotig	CDS	142510418	142510491	.	+	0	Parent=comp121453_c0_seq1.mrna1
Chr2	gffcl	locus	142522065	142523682	.	-	.	ID=RLOC_00022304;geneIDs=comp147501_c0_seq1.path1;transcripts=comp147501_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142522065	142523682	.	-	.	ID=comp147501_c0_seq1.mrna1;geneID=comp147501_c0_seq1.path1;Name=comp147501_c0_seq1;Dir=antisensecoverage=99.4;identity=95.8;matches=635;mismatches=20;indels=8;unknowns=0;Target=comp147501_c0_seq1 336 452 .;locus=RLOC_00022304
Chr2	stalkie_big_nohaplotig	exon	142522065	142522188	92	-	.	Parent=comp147501_c0_seq1.mrna1;Target=comp147501_c0_seq1 1 124 -
Chr2	stalkie_big_nohaplotig	exon	142522240	142522337	95	-	.	Parent=comp147501_c0_seq1.mrna1;Target=comp147501_c0_seq1 125 222 -
Chr2	stalkie_big_nohaplotig	exon	142523242	142523682	96	-	.	Parent=comp147501_c0_seq1.mrna1;Target=comp147501_c0_seq1 223 655 -
Chr2	stalkie_big_nohaplotig	CDS	142523362	142523479	.	-	0	Parent=comp147501_c0_seq1.mrna1
Chr2	gffcl	locus	142525908	142526533	.	+	.	ID=RLOC_00022305;geneIDs=comp149364_c0_seq1.path1;transcripts=comp149364_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142525908	142526533	.	+	.	ID=comp149364_c0_seq1.mrna1;geneID=comp149364_c0_seq1.path1;Name=comp149364_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=621;mismatches=5;indels=0;unknowns=0;Target=comp149364_c0_seq1 626 1 .;CDS_Target=comp149364_c0_seq1 119 3 .;locus=RLOC_00022305
Chr2	stalkie_big_nohaplotig	exon	142525908	142526533	99	+	.	Parent=comp149364_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142525910	142526026	.	+	0	Parent=comp149364_c0_seq1.mrna1
Chr2	gffcl	locus	142534893	142535389	.	+	.	ID=RLOC_00022306;geneIDs=comp116202_c0_seq1.path1;transcripts=comp116202_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142534893	142535389	.	+	.	ID=comp116202_c0_seq1.mrna1;geneID=comp116202_c0_seq1.path1;Name=comp116202_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.4;matches=487;mismatches=10;indels=3;unknowns=0;Target=comp116202_c0_seq1 500 1 .;CDS_Target=comp116202_c0_seq1 225 1 .;locus=RLOC_00022306
Chr2	stalkie_big_nohaplotig	exon	142534893	142535389	97	+	.	Parent=comp116202_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142534893	142535117	.	+	0	Parent=comp116202_c0_seq1.mrna1
Chr2	gffcl	locus	142537933	142538409	.	+	.	ID=RLOC_00022307;geneIDs=comp156744_c0_seq1.path1;transcripts=comp156744_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142537933	142538409	.	+	.	ID=comp156744_c0_seq1.mrna1;geneID=comp156744_c0_seq1.path1;Name=comp156744_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.8;matches=476;mismatches=1;indels=0;unknowns=0;Target=comp156744_c0_seq1 477 1 .;CDS_Target=comp156744_c0_seq1 213 1 .;locus=RLOC_00022307
Chr2	stalkie_big_nohaplotig	exon	142537933	142538409	99	+	.	Parent=comp156744_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142537933	142538145	.	+	0	Parent=comp156744_c0_seq1.mrna1
Chr2	gffcl	locus	142543924	142544442	.	-	.	ID=RLOC_00022308;geneIDs=comp149047_c0_seq1.path1;transcripts=comp149047_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142543924	142544442	.	-	.	ID=comp149047_c0_seq1.mrna1;geneID=comp149047_c0_seq1.path1;Name=comp149047_c0_seq1;Dir=indeterminatecoverage=94.5;identity=99.2;matches=515;mismatches=4;indels=0;unknowns=0;Target=comp149047_c0_seq1 542 24 .;CDS_Target=comp149047_c0_seq1 358 173 .;locus=RLOC_00022308
Chr2	stalkie_big_nohaplotig	exon	142543924	142544442	99	-	.	Parent=comp149047_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142544108	142544293	.	-	0	Parent=comp149047_c0_seq1.mrna1
Chr2	gffcl	locus	142670582	142672565	.	-	.	ID=RLOC_00022309;geneIDs=FBgn0039620.2.path1;transcripts=FBgn0039620.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142670582	142672565	.	-	.	ID=FBgn0039620.2.mrna1;geneID=FBgn0039620.2.path1;Name=FBgn0039620.2;Dir=sensecoverage=100.0;identity=99.9;matches=1549;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022309
Chr2	stalkie_big_nohaplotig	exon	142670582	142670666	100	-	.	Parent=FBgn0039620.2.mrna1;Target=FBgn0039620.2 1467 1551 +
Chr2	stalkie_big_nohaplotig	exon	142670727	142670984	100	-	.	Parent=FBgn0039620.2.mrna1;Target=FBgn0039620.2 1209 1466 +
Chr2	stalkie_big_nohaplotig	exon	142671041	142671292	100	-	.	Parent=FBgn0039620.2.mrna1;Target=FBgn0039620.2 957 1208 +
Chr2	stalkie_big_nohaplotig	exon	142671350	142671545	100	-	.	Parent=FBgn0039620.2.mrna1;Target=FBgn0039620.2 761 956 +
Chr2	stalkie_big_nohaplotig	exon	142671613	142671722	99	-	.	Parent=FBgn0039620.2.mrna1;Target=FBgn0039620.2 651 760 +
Chr2	stalkie_big_nohaplotig	exon	142671798	142672192	100	-	.	Parent=FBgn0039620.2.mrna1;Target=FBgn0039620.2 256 650 +
Chr2	stalkie_big_nohaplotig	exon	142672255	142672370	99	-	.	Parent=FBgn0039620.2.mrna1;Target=FBgn0039620.2 140 255 +
Chr2	stalkie_big_nohaplotig	exon	142672427	142672565	100	-	.	Parent=FBgn0039620.2.mrna1;Target=FBgn0039620.2 1 139 +
Chr2	stalkie_big_nohaplotig	CDS	142670582	142670666	.	-	1	Parent=FBgn0039620.2.mrna1;Target=FBgn0039620.2 1467 1551 +
Chr2	stalkie_big_nohaplotig	CDS	142670727	142670984	.	-	1	Parent=FBgn0039620.2.mrna1;Target=FBgn0039620.2 1209 1466 +
Chr2	stalkie_big_nohaplotig	CDS	142671041	142671292	.	-	1	Parent=FBgn0039620.2.mrna1;Target=FBgn0039620.2 957 1208 +
Chr2	stalkie_big_nohaplotig	CDS	142671350	142671545	.	-	2	Parent=FBgn0039620.2.mrna1;Target=FBgn0039620.2 761 956 +
Chr2	stalkie_big_nohaplotig	CDS	142671613	142671722	.	-	1	Parent=FBgn0039620.2.mrna1;Target=FBgn0039620.2 651 760 +
Chr2	stalkie_big_nohaplotig	CDS	142671798	142672192	.	-	0	Parent=FBgn0039620.2.mrna1;Target=FBgn0039620.2 256 650 +
Chr2	stalkie_big_nohaplotig	CDS	142672255	142672370	.	-	2	Parent=FBgn0039620.2.mrna1;Target=FBgn0039620.2 140 255 +
Chr2	stalkie_big_nohaplotig	CDS	142672427	142672565	.	-	0	Parent=FBgn0039620.2.mrna1;Target=FBgn0039620.2 1 139 +
Chr2	gffcl	locus	142673098	142673496	.	+	.	ID=RLOC_00022310;geneIDs=comp144148_c0_seq1.path1;transcripts=comp144148_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142673098	142673496	.	+	.	ID=comp144148_c0_seq1.mrna1;geneID=comp144148_c0_seq1.path1;Name=comp144148_c0_seq1;Dir=indeterminatecoverage=100.0;identity=88.8;matches=363;mismatches=29;indels=17;unknowns=0;Target=comp144148_c0_seq1 402 1 .;CDS_Target=comp144148_c0_seq1 371 291 .;locus=RLOC_00022310
Chr2	stalkie_big_nohaplotig	exon	142673098	142673496	88	+	.	Parent=comp144148_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142673385	142673465	.	+	0	Parent=comp144148_c0_seq1.mrna1
Chr2	gffcl	locus	142684713	142689731	.	-	.	ID=RLOC_00022311;geneIDs=comp137685_c0_seq1.path1;transcripts=comp137685_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142684713	142689731	.	-	.	ID=comp137685_c0_seq1.mrna1;geneID=comp137685_c0_seq1.path1;Name=comp137685_c0_seq1;Dir=sensecoverage=100.0;identity=92.0;matches=390;mismatches=23;indels=11;unknowns=0;Target=comp137685_c0_seq1 94 192 +;locus=RLOC_00022311
Chr2	stalkie_big_nohaplotig	exon	142684713	142685107	91	-	.	Parent=comp137685_c0_seq1.mrna1;Target=comp137685_c0_seq1 24 419 +
Chr2	stalkie_big_nohaplotig	exon	142689709	142689731	100	-	.	Parent=comp137685_c0_seq1.mrna1;Target=comp137685_c0_seq1 1 23 +
Chr2	stalkie_big_nohaplotig	CDS	142684936	142685034	.	-	0	Parent=comp137685_c0_seq1.mrna1
Chr2	gffcl	locus	142689934	142690717	.	+	.	ID=RLOC_00022312;geneIDs=comp147780_c0_seq1.path1;transcripts=comp147780_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142689934	142690717	.	+	.	ID=comp147780_c0_seq1.mrna1;geneID=comp147780_c0_seq1.path1;Name=comp147780_c0_seq1;Dir=indeterminatecoverage=97.6;identity=98.7;matches=779;mismatches=4;indels=6;unknowns=0;Target=comp147780_c0_seq1 788 1 .;CDS_Target=comp147780_c0_seq1 328 179 .;locus=RLOC_00022312
Chr2	stalkie_big_nohaplotig	exon	142689934	142690717	98	+	.	Parent=comp147780_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142690113	142690257	.	+	0	Parent=comp147780_c0_seq1.mrna1
Chr2	gffcl	locus	142725033	142725809	.	+	.	ID=RLOC_00022313;geneIDs=comp160791_c0_seq1.path1;transcripts=comp160791_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142725033	142725809	.	+	.	ID=comp160791_c0_seq1.mrna1;geneID=comp160791_c0_seq1.path1;Name=comp160791_c0_seq1;Dir=indeterminatecoverage=98.7;identity=98.8;matches=768;mismatches=9;indels=0;unknowns=0;Target=comp160791_c0_seq1 778 2 .;CDS_Target=comp160791_c0_seq1 411 274 .;locus=RLOC_00022313
Chr2	stalkie_big_nohaplotig	exon	142725033	142725809	98	+	.	Parent=comp160791_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142725305	142725442	.	+	0	Parent=comp160791_c0_seq1.mrna1
Chr2	gffcl	locus	142808064	142808802	.	-	.	ID=RLOC_00022314;geneIDs=comp138726_c0_seq1.path1;transcripts=comp138726_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142808064	142808802	.	-	.	ID=comp138726_c0_seq1.mrna1;geneID=comp138726_c0_seq1.path1;Name=comp138726_c0_seq1;Dir=indeterminatecoverage=98.0;identity=98.9;matches=732;mismatches=7;indels=1;unknowns=0;Target=comp138726_c0_seq1 740 1 .;CDS_Target=comp138726_c0_seq1 469 359 .;locus=RLOC_00022314
Chr2	stalkie_big_nohaplotig	exon	142808064	142808802	98	-	.	Parent=comp138726_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142808335	142808445	.	-	0	Parent=comp138726_c0_seq1.mrna1
Chr2	gffcl	locus	142808920	142809423	.	+	.	ID=RLOC_00022315;geneIDs=comp136126_c0_seq1.path1;transcripts=comp136126_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142808920	142809423	.	+	.	ID=comp136126_c0_seq1.mrna1;geneID=comp136126_c0_seq1.path1;Name=comp136126_c0_seq1;Dir=indeterminatecoverage=99.6;identity=97.6;matches=497;mismatches=7;indels=5;unknowns=0;Target=comp136126_c0_seq1 509 1 .;CDS_Target=comp136126_c0_seq1 108 1 .;locus=RLOC_00022315
Chr2	stalkie_big_nohaplotig	exon	142808920	142809423	97	+	.	Parent=comp136126_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142808920	142809027	.	+	0	Parent=comp136126_c0_seq1.mrna1
Chr2	gffcl	locus	142900935	142901355	.	-	.	ID=RLOC_00022316;geneIDs=FBgn0038156.1.path1;transcripts=FBgn0038156.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	142900935	142901355	.	-	.	ID=FBgn0038156.1.mrna1;geneID=FBgn0038156.1.path1;Name=FBgn0038156.1;Dir=indeterminatecoverage=13.1;identity=99.5;matches=419;mismatches=2;indels=0;unknowns=0;Target=FBgn0038156.1 421 1 .;locus=RLOC_00022316
Chr2	stalkie_big_nohaplotig	exon	142900935	142901355	99	-	.	Parent=FBgn0038156.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	142900935	142901355	.	-	0	Parent=FBgn0038156.1.mrna1
Chr2	gffcl	locus	143007388	143008706	.	+	.	ID=RLOC_00022317;geneIDs=comp162141_c0_seq1.path1;transcripts=comp162141_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143007388	143008706	.	+	.	ID=comp162141_c0_seq1.mrna1;geneID=comp162141_c0_seq1.path1;Name=comp162141_c0_seq1;Dir=sensecoverage=98.7;identity=97.3;matches=869;mismatches=19;indels=5;unknowns=0;locus=RLOC_00022317
Chr2	stalkie_big_nohaplotig	exon	143007388	143008012	97	+	.	Parent=comp162141_c0_seq1.mrna1;Target=comp162141_c0_seq1 11 636 +
Chr2	stalkie_big_nohaplotig	exon	143008442	143008706	97	+	.	Parent=comp162141_c0_seq1.mrna1;Target=comp162141_c0_seq1 637 901 +
Chr2	stalkie_big_nohaplotig	CDS	143007517	143008012	.	+	0	Parent=comp162141_c0_seq1.mrna1;Target=comp162141_c0_seq1 141 636 +
Chr2	stalkie_big_nohaplotig	CDS	143008442	143008659	.	+	2	Parent=comp162141_c0_seq1.mrna1;Target=comp162141_c0_seq1 637 854 +
Chr2	gffcl	locus	143014976	143015481	.	-	.	ID=RLOC_00022318;geneIDs=comp150131_c0_seq1.path1;transcripts=comp150131_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143014976	143015481	.	-	.	ID=comp150131_c0_seq1.mrna1;geneID=comp150131_c0_seq1.path1;Name=comp150131_c0_seq1;Dir=indeterminatecoverage=96.2;identity=99.2;matches=504;mismatches=2;indels=2;unknowns=0;Target=comp150131_c0_seq1 508 1 .;CDS_Target=comp150131_c0_seq1 174 100 .;locus=RLOC_00022318
Chr2	stalkie_big_nohaplotig	exon	143014976	143015481	99	-	.	Parent=comp150131_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143015308	143015382	.	-	0	Parent=comp150131_c0_seq1.mrna1
Chr2	gffcl	locus	143015763	143017065	.	.	.	ID=RLOC_00022319;geneIDs=comp154811_c0_seq1.path1,comp159055_c0_seq1.path1;transcripts=comp159055_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143015763	143016765	.	-	.	ID=comp159055_c0_seq1.mrna1;geneID=comp159055_c0_seq1.path1;Name=comp159055_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.6;matches=999;mismatches=4;indels=0;unknowns=0;Target=comp159055_c0_seq1 1004 2 .;CDS_Target=comp159055_c0_seq1 585 223 .;locus=RLOC_00022319
Chr2	stalkie_big_nohaplotig	exon	143015763	143016765	99	-	.	Parent=comp159055_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143016182	143016544	.	-	0	Parent=comp159055_c0_seq1.mrna1
Chr2	gffcl	locus	143152637	143154453	.	+	.	ID=RLOC_00022322;geneIDs=comp158658_c0_seq1.path1;transcripts=comp158658_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143152637	143154453	.	+	.	ID=comp158658_c0_seq1.mrna1;geneID=comp158658_c0_seq1.path1;Name=comp158658_c0_seq1;Dir=antisensecoverage=97.4;identity=99.4;matches=1071;mismatches=5;indels=1;unknowns=0;locus=RLOC_00022322
Chr2	stalkie_big_nohaplotig	exon	143152637	143152709	97	+	.	Parent=comp158658_c0_seq1.mrna1;Target=comp158658_c0_seq1 1034 1106 -
Chr2	stalkie_big_nohaplotig	exon	143152764	143152847	100	+	.	Parent=comp158658_c0_seq1.mrna1;Target=comp158658_c0_seq1 950 1033 -
Chr2	stalkie_big_nohaplotig	exon	143153356	143153513	98	+	.	Parent=comp158658_c0_seq1.mrna1;Target=comp158658_c0_seq1 791 949 -
Chr2	stalkie_big_nohaplotig	exon	143153580	143153642	100	+	.	Parent=comp158658_c0_seq1.mrna1;Target=comp158658_c0_seq1 728 790 -
Chr2	stalkie_big_nohaplotig	exon	143153756	143154453	99	+	.	Parent=comp158658_c0_seq1.mrna1;Target=comp158658_c0_seq1 30 727 -
Chr2	stalkie_big_nohaplotig	CDS	143153624	143153642	.	+	0	Parent=comp158658_c0_seq1.mrna1;Target=comp158658_c0_seq1 728 746 .
Chr2	stalkie_big_nohaplotig	CDS	143153756	143154285	.	+	2	Parent=comp158658_c0_seq1.mrna1;Target=comp158658_c0_seq1 198 727 .
Chr2	gffcl	locus	143200721	143201382	.	+	.	ID=RLOC_00022323;geneIDs=FBgn0031361.1.path1;transcripts=FBgn0031361.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143200721	143201382	.	+	.	ID=FBgn0031361.1.mrna1;geneID=FBgn0031361.1.path1;Name=FBgn0031361.1;Dir=sensecoverage=99.6;identity=97.8;matches=535;mismatches=12;indels=0;unknowns=0;locus=RLOC_00022323
Chr2	stalkie_big_nohaplotig	exon	143200721	143200876	98	+	.	Parent=FBgn0031361.1.mrna1;Target=FBgn0031361.1 1 156 +
Chr2	stalkie_big_nohaplotig	exon	143200932	143201132	96	+	.	Parent=FBgn0031361.1.mrna1;Target=FBgn0031361.1 157 357 +
Chr2	stalkie_big_nohaplotig	exon	143201193	143201382	99	+	.	Parent=FBgn0031361.1.mrna1;Target=FBgn0031361.1 358 547 +
Chr2	stalkie_big_nohaplotig	CDS	143200721	143200876	.	+	0	Parent=FBgn0031361.1.mrna1;Target=FBgn0031361.1 1 156 +
Chr2	stalkie_big_nohaplotig	CDS	143200932	143201132	.	+	0	Parent=FBgn0031361.1.mrna1;Target=FBgn0031361.1 157 357 +
Chr2	stalkie_big_nohaplotig	CDS	143201193	143201381	.	+	0	Parent=FBgn0031361.1.mrna1;Target=FBgn0031361.1 358 546 +
Chr2	gffcl	locus	143204175	143214298	.	+	.	ID=RLOC_00022324;geneIDs=comp161875_c0_seq1.path2;transcripts=comp161875_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	143204175	143214298	.	+	.	ID=comp161875_c0_seq1.mrna2;geneID=comp161875_c0_seq1.path2;Name=comp161875_c0_seq1;Dir=indeterminatecoverage=31.7;identity=91.6;matches=1223;mismatches=18;indels=94;unknowns=0;locus=RLOC_00022324
Chr2	stalkie_big_nohaplotig	exon	143204175	143205452	91	+	.	Parent=comp161875_c0_seq1.mrna2;Target=comp161875_c0_seq1 3917 2656 .
Chr2	stalkie_big_nohaplotig	exon	143209007	143209018	83	+	.	Parent=comp161875_c0_seq1.mrna2;Target=comp161875_c0_seq1 3929 3918 .
Chr2	stalkie_big_nohaplotig	exon	143214293	143214298	100	+	.	Parent=comp161875_c0_seq1.mrna2;Target=comp161875_c0_seq1 3935 3930 .
Chr2	gffcl	locus	143206132	143207007	.	+	.	ID=RLOC_00022325;geneIDs=comp163422_c0_seq1.path1;transcripts=comp163422_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143206132	143207007	.	+	.	ID=comp163422_c0_seq1.mrna1;geneID=comp163422_c0_seq1.path1;Name=comp163422_c0_seq1;Dir=indeterminatecoverage=98.8;identity=97.9;matches=859;mismatches=15;indels=3;unknowns=0;Target=comp163422_c0_seq1 886 12 .;CDS_Target=comp163422_c0_seq1 243 88 .;locus=RLOC_00022325
Chr2	stalkie_big_nohaplotig	exon	143206132	143207007	97	+	.	Parent=comp163422_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143206208	143206363	.	+	0	Parent=comp163422_c0_seq1.mrna1
Chr2	gffcl	locus	143208645	143242269	.	-	.	ID=RLOC_00022326;geneIDs=FBgn0083949.path1;transcripts=FBgn0083949.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143208645	143242269	.	-	.	ID=FBgn0083949.mrna1;geneID=FBgn0083949.path1;Name=FBgn0083949;Dir=sensecoverage=100.0;identity=99.8;matches=1716;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022326
Chr2	stalkie_big_nohaplotig	exon	143208645	143209349	99	-	.	Parent=FBgn0083949.mrna1;Target=FBgn0083949 1015 1719 +
Chr2	stalkie_big_nohaplotig	exon	143210580	143210845	100	-	.	Parent=FBgn0083949.mrna1;Target=FBgn0083949 749 1014 +
Chr2	stalkie_big_nohaplotig	exon	143211112	143211270	100	-	.	Parent=FBgn0083949.mrna1;Target=FBgn0083949 590 748 +
Chr2	stalkie_big_nohaplotig	exon	143236404	143236538	100	-	.	Parent=FBgn0083949.mrna1;Target=FBgn0083949 455 589 +
Chr2	stalkie_big_nohaplotig	exon	143241816	143242269	100	-	.	Parent=FBgn0083949.mrna1;Target=FBgn0083949 1 454 +
Chr2	stalkie_big_nohaplotig	CDS	143208645	143209349	.	-	0	Parent=FBgn0083949.mrna1;Target=FBgn0083949 1015 1719 +
Chr2	stalkie_big_nohaplotig	CDS	143210580	143210845	.	-	2	Parent=FBgn0083949.mrna1;Target=FBgn0083949 749 1014 +
Chr2	stalkie_big_nohaplotig	CDS	143211112	143211270	.	-	2	Parent=FBgn0083949.mrna1;Target=FBgn0083949 590 748 +
Chr2	stalkie_big_nohaplotig	CDS	143236404	143236538	.	-	2	Parent=FBgn0083949.mrna1;Target=FBgn0083949 455 589 +
Chr2	stalkie_big_nohaplotig	CDS	143241816	143242269	.	-	0	Parent=FBgn0083949.mrna1;Target=FBgn0083949 1 454 +
Chr2	gffcl	locus	143467073	143467859	.	-	.	ID=RLOC_00022327;geneIDs=FBgn0011281.2.path1;transcripts=FBgn0011281.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143467073	143467859	.	-	.	ID=FBgn0011281.2.mrna1;geneID=FBgn0011281.2.path1;Name=FBgn0011281.2;Dir=sensecoverage=96.8;identity=99.8;matches=449;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022327
Chr2	stalkie_big_nohaplotig	exon	143467073	143467329	99	-	.	Parent=FBgn0011281.2.mrna1;Target=FBgn0011281.2 194 450 +
Chr2	stalkie_big_nohaplotig	exon	143467571	143467646	100	-	.	Parent=FBgn0011281.2.mrna1;Target=FBgn0011281.2 118 193 +
Chr2	stalkie_big_nohaplotig	exon	143467743	143467859	100	-	.	Parent=FBgn0011281.2.mrna1;Target=FBgn0011281.2 1 117 +
Chr2	stalkie_big_nohaplotig	CDS	143467073	143467329	.	-	2	Parent=FBgn0011281.2.mrna1;Target=FBgn0011281.2 194 450 +
Chr2	stalkie_big_nohaplotig	CDS	143467571	143467646	.	-	0	Parent=FBgn0011281.2.mrna1;Target=FBgn0011281.2 118 193 +
Chr2	stalkie_big_nohaplotig	CDS	143467743	143467859	.	-	0	Parent=FBgn0011281.2.mrna1;Target=FBgn0011281.2 1 117 +
Chr2	gffcl	locus	143478253	143479039	.	-	.	ID=RLOC_00022328;geneIDs=FBgn0011281.2.path2;transcripts=FBgn0011281.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	143478253	143479039	.	-	.	ID=FBgn0011281.2.mrna2;geneID=FBgn0011281.2.path2;Name=FBgn0011281.2;Dir=sensecoverage=96.8;identity=99.8;matches=449;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022328
Chr2	stalkie_big_nohaplotig	exon	143478253	143478509	99	-	.	Parent=FBgn0011281.2.mrna2;Target=FBgn0011281.2 194 450 +
Chr2	stalkie_big_nohaplotig	exon	143478751	143478826	100	-	.	Parent=FBgn0011281.2.mrna2;Target=FBgn0011281.2 118 193 +
Chr2	stalkie_big_nohaplotig	exon	143478923	143479039	100	-	.	Parent=FBgn0011281.2.mrna2;Target=FBgn0011281.2 1 117 +
Chr2	stalkie_big_nohaplotig	CDS	143478253	143478509	.	-	2	Parent=FBgn0011281.2.mrna2;Target=FBgn0011281.2 194 450 +
Chr2	stalkie_big_nohaplotig	CDS	143478751	143478826	.	-	0	Parent=FBgn0011281.2.mrna2;Target=FBgn0011281.2 118 193 +
Chr2	stalkie_big_nohaplotig	CDS	143478923	143479039	.	-	0	Parent=FBgn0011281.2.mrna2;Target=FBgn0011281.2 1 117 +
Chr2	gffcl	locus	143533913	143535690	.	-	.	ID=RLOC_00022329;geneIDs=FBgn0011281.1.path1;transcripts=FBgn0011281.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143533913	143535690	.	-	.	ID=FBgn0011281.1.mrna1;geneID=FBgn0011281.1.path1;Name=FBgn0011281.1;Dir=sensecoverage=96.7;identity=99.5;matches=436;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022329
Chr2	stalkie_big_nohaplotig	exon	143533913	143534175	99	-	.	Parent=FBgn0011281.1.mrna1;Target=FBgn0011281.1 176 438 +
Chr2	stalkie_big_nohaplotig	exon	143535156	143535231	100	-	.	Parent=FBgn0011281.1.mrna1;Target=FBgn0011281.1 100 175 +
Chr2	stalkie_big_nohaplotig	exon	143535592	143535690	100	-	.	Parent=FBgn0011281.1.mrna1;Target=FBgn0011281.1 1 99 +
Chr2	stalkie_big_nohaplotig	CDS	143533913	143534175	.	-	2	Parent=FBgn0011281.1.mrna1;Target=FBgn0011281.1 176 438 +
Chr2	stalkie_big_nohaplotig	CDS	143535156	143535231	.	-	0	Parent=FBgn0011281.1.mrna1;Target=FBgn0011281.1 100 175 +
Chr2	stalkie_big_nohaplotig	CDS	143535592	143535690	.	-	0	Parent=FBgn0011281.1.mrna1;Target=FBgn0011281.1 1 99 +
Chr2	gffcl	locus	143549361	143558973	.	.	.	ID=RLOC_00022330;geneIDs=FBgn0003261.1.path1,comp117628_c0_seq1.path1;transcripts=FBgn0003261.1.mrna1,comp117628_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143549361	143558973	.	-	.	ID=FBgn0003261.1.mrna1;geneID=FBgn0003261.1.path1;Name=FBgn0003261.1;Dir=sensecoverage=100.0;identity=98.9;matches=2352;mismatches=9;indels=18;unknowns=0;locus=RLOC_00022330
Chr2	stalkie_big_nohaplotig	exon	143549361	143549633	93	-	.	Parent=FBgn0003261.1.mrna1;Target=FBgn0003261.1 2098 2373 +
Chr2	stalkie_big_nohaplotig	exon	143549732	143549910	100	-	.	Parent=FBgn0003261.1.mrna1;Target=FBgn0003261.1 1919 2097 +
Chr2	stalkie_big_nohaplotig	exon	143553695	143553933	100	-	.	Parent=FBgn0003261.1.mrna1;Target=FBgn0003261.1 1680 1918 +
Chr2	stalkie_big_nohaplotig	exon	143554001	143555215	99	-	.	Parent=FBgn0003261.1.mrna1;Target=FBgn0003261.1 465 1679 +
Chr2	stalkie_big_nohaplotig	exon	143558513	143558973	99	-	.	Parent=FBgn0003261.1.mrna1;Target=FBgn0003261.1 1 464 +
Chr2	stalkie_big_nohaplotig	CDS	143549361	143549633	.	-	0	Parent=FBgn0003261.1.mrna1;Target=FBgn0003261.1 2098 2373 +
Chr2	stalkie_big_nohaplotig	CDS	143549732	143549910	.	-	2	Parent=FBgn0003261.1.mrna1;Target=FBgn0003261.1 1919 2097 +
Chr2	stalkie_big_nohaplotig	CDS	143553695	143553933	.	-	1	Parent=FBgn0003261.1.mrna1;Target=FBgn0003261.1 1680 1918 +
Chr2	stalkie_big_nohaplotig	CDS	143554001	143555215	.	-	1	Parent=FBgn0003261.1.mrna1;Target=FBgn0003261.1 465 1679 +
Chr2	stalkie_big_nohaplotig	CDS	143558513	143558973	.	-	0	Parent=FBgn0003261.1.mrna1;Target=FBgn0003261.1 1 464 +
Chr2	stalkie_big_nohaplotig	mRNA	143553427	143553718	.	+	.	ID=comp117628_c0_seq1.mrna1;geneID=comp117628_c0_seq1.path1;Name=comp117628_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=290;mismatches=2;indels=0;unknowns=0;Target=comp117628_c0_seq1 292 1 .;CDS_Target=comp117628_c0_seq1 99 1 .;locus=RLOC_00022330
Chr2	stalkie_big_nohaplotig	exon	143553427	143553718	99	+	.	Parent=comp117628_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143553427	143553525	.	+	0	Parent=comp117628_c0_seq1.mrna1
Chr2	gffcl	locus	143562107	143562541	.	-	.	ID=RLOC_00022331;geneIDs=FBgn0034472.1.path1;transcripts=FBgn0034472.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143562107	143562541	.	-	.	ID=FBgn0034472.1.mrna1;geneID=FBgn0034472.1.path1;Name=FBgn0034472.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=435;mismatches=0;indels=0;unknowns=0;Target=FBgn0034472.1 435 1 .;locus=RLOC_00022331
Chr2	stalkie_big_nohaplotig	exon	143562107	143562541	100	-	.	Parent=FBgn0034472.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143562107	143562541	.	-	0	Parent=FBgn0034472.1.mrna1
Chr2	gffcl	locus	143563101	143564022	.	+	.	ID=RLOC_00022332;geneIDs=FBgn0037395.1.path1;transcripts=FBgn0037395.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143563101	143564022	.	+	.	ID=FBgn0037395.1.mrna1;geneID=FBgn0037395.1.path1;Name=FBgn0037395.1;Dir=antisensecoverage=100.0;identity=99.8;matches=802;mismatches=2;indels=0;unknowns=0;Target=FBgn0037395.1 448 615 .;locus=RLOC_00022332
Chr2	stalkie_big_nohaplotig	exon	143563101	143563627	99	+	.	Parent=FBgn0037395.1.mrna1;Target=FBgn0037395.1 278 804 -
Chr2	stalkie_big_nohaplotig	exon	143563682	143563934	100	+	.	Parent=FBgn0037395.1.mrna1;Target=FBgn0037395.1 25 277 -
Chr2	stalkie_big_nohaplotig	exon	143563999	143564022	100	+	.	Parent=FBgn0037395.1.mrna1;Target=FBgn0037395.1 1 24 -
Chr2	stalkie_big_nohaplotig	CDS	143563290	143563457	.	+	0	Parent=FBgn0037395.1.mrna1
Chr2	gffcl	locus	143622303	143622836	.	+	.	ID=RLOC_00022333;geneIDs=Dv_FBgn0211192.path1;transcripts=Dv_FBgn0211192.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143622303	143622836	.	+	.	ID=Dv_FBgn0211192.mrna1;geneID=Dv_FBgn0211192.path1;Name=Dv_FBgn0211192;Dir=sensecoverage=100.0;identity=99.5;matches=406;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022333
Chr2	stalkie_big_nohaplotig	exon	143622303	143622500	99	+	.	Parent=Dv_FBgn0211192.mrna1;Target=Dv_FBgn0211192 1 198 +
Chr2	stalkie_big_nohaplotig	exon	143622556	143622711	99	+	.	Parent=Dv_FBgn0211192.mrna1;Target=Dv_FBgn0211192 199 354 +
Chr2	stalkie_big_nohaplotig	exon	143622783	143622836	100	+	.	Parent=Dv_FBgn0211192.mrna1;Target=Dv_FBgn0211192 355 408 +
Chr2	stalkie_big_nohaplotig	CDS	143622303	143622500	.	+	0	Parent=Dv_FBgn0211192.mrna1;Target=Dv_FBgn0211192 1 198 +
Chr2	stalkie_big_nohaplotig	CDS	143622556	143622711	.	+	0	Parent=Dv_FBgn0211192.mrna1;Target=Dv_FBgn0211192 199 354 +
Chr2	stalkie_big_nohaplotig	CDS	143622783	143622836	.	+	0	Parent=Dv_FBgn0211192.mrna1;Target=Dv_FBgn0211192 355 408 +
Chr2	gffcl	locus	143683243	143684498	.	+	.	ID=RLOC_00022334;geneIDs=FBgn0026077.1.path2,comp135943_c0_seq1.path1;transcripts=FBgn0026077.1.mrna2,comp135943_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143683243	143684498	.	+	.	ID=FBgn0026077.1.mrna2;geneID=FBgn0026077.1.path2;Name=FBgn0026077.1;Dir=sensecoverage=92.6;identity=99.9;matches=724;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022334
Chr2	stalkie_big_nohaplotig	exon	143683243	143683452	100	+	.	Parent=FBgn0026077.1.mrna2;Target=FBgn0026077.1 59 268 +
Chr2	stalkie_big_nohaplotig	exon	143683526	143683714	99	+	.	Parent=FBgn0026077.1.mrna2;Target=FBgn0026077.1 269 457 +
Chr2	stalkie_big_nohaplotig	exon	143683791	143684001	100	+	.	Parent=FBgn0026077.1.mrna2;Target=FBgn0026077.1 458 668 +
Chr2	stalkie_big_nohaplotig	exon	143684384	143684498	100	+	.	Parent=FBgn0026077.1.mrna2;Target=FBgn0026077.1 669 783 +
Chr2	stalkie_big_nohaplotig	CDS	143683243	143683452	.	+	1	Parent=FBgn0026077.1.mrna2;Target=FBgn0026077.1 59 268 +
Chr2	stalkie_big_nohaplotig	CDS	143683526	143683714	.	+	1	Parent=FBgn0026077.1.mrna2;Target=FBgn0026077.1 269 457 +
Chr2	stalkie_big_nohaplotig	CDS	143683791	143684001	.	+	1	Parent=FBgn0026077.1.mrna2;Target=FBgn0026077.1 458 668 +
Chr2	stalkie_big_nohaplotig	CDS	143684384	143684498	.	+	0	Parent=FBgn0026077.1.mrna2;Target=FBgn0026077.1 669 783 +
Chr2	stalkie_big_nohaplotig	mRNA	143683978	143684405	.	+	.	ID=comp135943_c0_seq1.mrna1;geneID=comp135943_c0_seq1.path1;Name=comp135943_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=427;mismatches=0;indels=1;unknowns=0;Target=comp135943_c0_seq1 427 1 .;CDS_Target=comp135943_c0_seq1 310 173 .;locus=RLOC_00022334
Chr2	stalkie_big_nohaplotig	exon	143683978	143684405	99	+	.	Parent=comp135943_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143684150	143684287	.	+	0	Parent=comp135943_c0_seq1.mrna1
Chr2	gffcl	locus	143685166	143685706	.	+	.	ID=RLOC_00022335;geneIDs=comp143652_c0_seq1.path1;transcripts=comp143652_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143685166	143685706	.	+	.	ID=comp143652_c0_seq1.mrna1;geneID=comp143652_c0_seq1.path1;Name=comp143652_c0_seq1;Dir=indeterminatecoverage=96.8;identity=99.4;matches=538;mismatches=3;indels=0;unknowns=0;Target=comp143652_c0_seq1 559 19 .;CDS_Target=comp143652_c0_seq1 353 252 .;locus=RLOC_00022335
Chr2	stalkie_big_nohaplotig	exon	143685166	143685706	99	+	.	Parent=comp143652_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143685399	143685500	.	+	0	Parent=comp143652_c0_seq1.mrna1
Chr2	gffcl	locus	143686424	143688096	.	-	.	ID=RLOC_00022336;geneIDs=comp154792_c0_seq1.path1;transcripts=comp154792_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143686424	143688096	.	-	.	ID=comp154792_c0_seq1.mrna1;geneID=comp154792_c0_seq1.path1;Name=comp154792_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1669;mismatches=4;indels=12;unknowns=0;Target=comp154792_c0_seq1 1685 1 .;CDS_Target=comp154792_c0_seq1 224 105 .;locus=RLOC_00022336
Chr2	stalkie_big_nohaplotig	exon	143686424	143688096	99	-	.	Parent=comp154792_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143687873	143687992	.	-	0	Parent=comp154792_c0_seq1.mrna1
Chr2	gffcl	locus	143689390	143689635	.	+	.	ID=RLOC_00022337;geneIDs=comp146726_c0_seq1.path1;transcripts=comp146726_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143689390	143689635	.	+	.	ID=comp146726_c0_seq1.mrna1;geneID=comp146726_c0_seq1.path1;Name=comp146726_c0_seq1;Dir=indeterminatecoverage=91.8;identity=96.3;matches=237;mismatches=9;indels=0;unknowns=0;Target=comp146726_c0_seq1 268 23 .;CDS_Target=comp146726_c0_seq1 54 25 .;locus=RLOC_00022337
Chr2	stalkie_big_nohaplotig	exon	143689390	143689635	96	+	.	Parent=comp146726_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143689392	143689421	.	+	0	Parent=comp146726_c0_seq1.mrna1
Chr2	gffcl	locus	143734220	143734277	.	-	.	ID=RLOC_00022339;geneIDs=FBgn0026077.1.path1;transcripts=FBgn0026077.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143734220	143734277	.	-	.	ID=FBgn0026077.1.mrna1;geneID=FBgn0026077.1.path1;Name=FBgn0026077.1;Dir=indeterminatecoverage=7.4;identity=100.0;matches=58;mismatches=0;indels=0;unknowns=0;Target=FBgn0026077.1 58 1 .;locus=RLOC_00022339
Chr2	stalkie_big_nohaplotig	exon	143734220	143734277	100	-	.	Parent=FBgn0026077.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143734220	143734277	.	-	0	Parent=FBgn0026077.1.mrna1
Chr2	gffcl	locus	143755784	143756664	.	+	.	ID=RLOC_00022340;geneIDs=FBgn0046878.1.path1;transcripts=FBgn0046878.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143755784	143756664	.	+	.	ID=FBgn0046878.1.mrna1;geneID=FBgn0046878.1.path1;Name=FBgn0046878.1;Dir=sensecoverage=100.0;identity=100.0;matches=753;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022340
Chr2	stalkie_big_nohaplotig	exon	143755784	143755855	100	+	.	Parent=FBgn0046878.1.mrna1;Target=FBgn0046878.1 1 72 +
Chr2	stalkie_big_nohaplotig	exon	143755922	143756242	100	+	.	Parent=FBgn0046878.1.mrna1;Target=FBgn0046878.1 73 393 +
Chr2	stalkie_big_nohaplotig	exon	143756305	143756664	100	+	.	Parent=FBgn0046878.1.mrna1;Target=FBgn0046878.1 394 753 +
Chr2	stalkie_big_nohaplotig	CDS	143755784	143755855	.	+	0	Parent=FBgn0046878.1.mrna1;Target=FBgn0046878.1 1 72 +
Chr2	stalkie_big_nohaplotig	CDS	143755922	143756242	.	+	0	Parent=FBgn0046878.1.mrna1;Target=FBgn0046878.1 73 393 +
Chr2	stalkie_big_nohaplotig	CDS	143756305	143756664	.	+	0	Parent=FBgn0046878.1.mrna1;Target=FBgn0046878.1 394 753 +
Chr2	gffcl	locus	143759483	143760448	.	+	.	ID=RLOC_00022341;geneIDs=FBgn0046876.1.path1;transcripts=FBgn0046876.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143759483	143760448	.	+	.	ID=FBgn0046876.1.mrna1;geneID=FBgn0046876.1.path1;Name=FBgn0046876.1;Dir=sensecoverage=100.0;identity=99.5;matches=833;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022341
Chr2	stalkie_big_nohaplotig	exon	143759483	143759560	98	+	.	Parent=FBgn0046876.1.mrna1;Target=FBgn0046876.1 1 78 +
Chr2	stalkie_big_nohaplotig	exon	143759631	143759948	99	+	.	Parent=FBgn0046876.1.mrna1;Target=FBgn0046876.1 79 396 +
Chr2	stalkie_big_nohaplotig	exon	143760008	143760448	99	+	.	Parent=FBgn0046876.1.mrna1;Target=FBgn0046876.1 397 837 +
Chr2	stalkie_big_nohaplotig	CDS	143759483	143759560	.	+	0	Parent=FBgn0046876.1.mrna1;Target=FBgn0046876.1 1 78 +
Chr2	stalkie_big_nohaplotig	CDS	143759631	143759948	.	+	0	Parent=FBgn0046876.1.mrna1;Target=FBgn0046876.1 79 396 +
Chr2	stalkie_big_nohaplotig	CDS	143760008	143760448	.	+	0	Parent=FBgn0046876.1.mrna1;Target=FBgn0046876.1 397 837 +
Chr2	gffcl	locus	143760749	143761608	.	-	.	ID=RLOC_00022342;geneIDs=FBgn0046875.1.path1;transcripts=FBgn0046875.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143760749	143761608	.	-	.	ID=FBgn0046875.1.mrna1;geneID=FBgn0046875.1.path1;Name=FBgn0046875.1;Dir=sensecoverage=100.0;identity=100.0;matches=615;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022342
Chr2	stalkie_big_nohaplotig	exon	143760749	143761132	100	-	.	Parent=FBgn0046875.1.mrna1;Target=FBgn0046875.1 232 615 +
Chr2	stalkie_big_nohaplotig	exon	143761378	143761608	100	-	.	Parent=FBgn0046875.1.mrna1;Target=FBgn0046875.1 1 231 +
Chr2	stalkie_big_nohaplotig	CDS	143760749	143761132	.	-	0	Parent=FBgn0046875.1.mrna1;Target=FBgn0046875.1 232 615 +
Chr2	stalkie_big_nohaplotig	CDS	143761378	143761608	.	-	0	Parent=FBgn0046875.1.mrna1;Target=FBgn0046875.1 1 231 +
Chr2	gffcl	locus	143826852	143832985	.	+	.	ID=RLOC_00022343;geneIDs=FBgn0039827.1.path1;transcripts=FBgn0039827.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143826852	143832985	.	+	.	ID=FBgn0039827.1.mrna1;geneID=FBgn0039827.1.path1;Name=FBgn0039827.1;Dir=sensecoverage=99.2;identity=99.3;matches=2539;mismatches=17;indels=0;unknowns=226;locus=RLOC_00022343
Chr2	stalkie_big_nohaplotig	exon	143826852	143827118	100	+	.	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 24 290 +
Chr2	stalkie_big_nohaplotig	exon	143827222	143827396	99	+	.	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 291 465 +
Chr2	stalkie_big_nohaplotig	exon	143827554	143827773	99	+	.	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 466 685 +
Chr2	stalkie_big_nohaplotig	exon	143828101	143828262	100	+	.	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 686 847 +
Chr2	stalkie_big_nohaplotig	exon	143828415	143828488	100	+	.	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 848 921 +
Chr2	stalkie_big_nohaplotig	exon	143830245	143830738	99	+	.	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 922 1415 +
Chr2	stalkie_big_nohaplotig	exon	143830869	143831136	99	+	.	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 1416 1683 +
Chr2	stalkie_big_nohaplotig	exon	143831333	143831750	99	+	.	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 1684 2101 +
Chr2	stalkie_big_nohaplotig	exon	143831830	143832153	99	+	.	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 2102 2425 +
Chr2	stalkie_big_nohaplotig	exon	143832210	143832401	97	+	.	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 2426 2617 +
Chr2	stalkie_big_nohaplotig	exon	143832700	143832785	98	+	.	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 2618 2703 +
Chr2	stalkie_big_nohaplotig	exon	143832884	143832985	99	+	.	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 2704 2805 +
Chr2	stalkie_big_nohaplotig	CDS	143826853	143827118	.	+	0	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 25 290 +
Chr2	stalkie_big_nohaplotig	CDS	143827222	143827396	.	+	1	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 291 465 +
Chr2	stalkie_big_nohaplotig	CDS	143827554	143827773	.	+	0	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 466 685 +
Chr2	stalkie_big_nohaplotig	CDS	143828101	143828262	.	+	2	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 686 847 +
Chr2	stalkie_big_nohaplotig	CDS	143828415	143828488	.	+	2	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 848 921 +
Chr2	stalkie_big_nohaplotig	CDS	143830245	143830738	.	+	0	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 922 1415 +
Chr2	stalkie_big_nohaplotig	CDS	143830869	143831136	.	+	1	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 1416 1683 +
Chr2	stalkie_big_nohaplotig	CDS	143831333	143831750	.	+	0	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 1684 2101 +
Chr2	stalkie_big_nohaplotig	CDS	143831830	143832153	.	+	2	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 2102 2425 +
Chr2	stalkie_big_nohaplotig	CDS	143832210	143832401	.	+	2	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 2426 2617 +
Chr2	stalkie_big_nohaplotig	CDS	143832700	143832785	.	+	2	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 2618 2703 +
Chr2	stalkie_big_nohaplotig	CDS	143832884	143832985	.	+	0	Parent=FBgn0039827.1.mrna1;Target=FBgn0039827.1 2704 2805 +
Chr2	gffcl	locus	143833367	143834822	.	+	.	ID=RLOC_00022344;geneIDs=comp162338_c3_seq1.path1;transcripts=comp162338_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143833367	143834822	.	+	.	ID=comp162338_c3_seq1.mrna1;geneID=comp162338_c3_seq1.path1;Name=comp162338_c3_seq1;Dir=indeterminatecoverage=99.1;identity=97.4;matches=1435;mismatches=16;indels=23;unknowns=0;Target=comp162338_c3_seq1 1482 14 .;CDS_Target=comp162338_c3_seq1 66 16 .;locus=RLOC_00022344
Chr2	stalkie_big_nohaplotig	exon	143833367	143834822	97	+	.	Parent=comp162338_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143833369	143833419	.	+	0	Parent=comp162338_c3_seq1.mrna1
Chr2	gffcl	locus	143835697	143836129	.	-	.	ID=RLOC_00022345;geneIDs=comp153987_c0_seq1.path1;transcripts=comp153987_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143835697	143836129	.	-	.	ID=comp153987_c0_seq1.mrna1;geneID=comp153987_c0_seq1.path1;Name=comp153987_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=430;mismatches=3;indels=0;unknowns=0;Target=comp153987_c0_seq1 433 1 .;CDS_Target=comp153987_c0_seq1 294 184 .;locus=RLOC_00022345
Chr2	stalkie_big_nohaplotig	exon	143835697	143836129	99	-	.	Parent=comp153987_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143835836	143835946	.	-	0	Parent=comp153987_c0_seq1.mrna1
Chr2	gffcl	locus	143836309	143851939	.	-	.	ID=RLOC_00022346;geneIDs=FBgn0000313.1.path1;transcripts=FBgn0000313.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143836309	143851939	.	-	.	ID=FBgn0000313.1.mrna1;geneID=FBgn0000313.1.path1;Name=FBgn0000313.1;Dir=sensecoverage=99.9;identity=99.4;matches=3921;mismatches=22;indels=0;unknowns=0;locus=RLOC_00022346
Chr2	stalkie_big_nohaplotig	exon	143836309	143836407	100	-	.	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 3850 3948 +
Chr2	stalkie_big_nohaplotig	exon	143836488	143836674	99	-	.	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 3663 3849 +
Chr2	stalkie_big_nohaplotig	exon	143836736	143836977	99	-	.	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 3421 3662 +
Chr2	stalkie_big_nohaplotig	exon	143837045	143837468	99	-	.	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 2997 3420 +
Chr2	stalkie_big_nohaplotig	exon	143838706	143839064	99	-	.	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 2638 2996 +
Chr2	stalkie_big_nohaplotig	exon	143839131	143839272	100	-	.	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 2496 2637 +
Chr2	stalkie_big_nohaplotig	exon	143839338	143839480	98	-	.	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 2353 2495 +
Chr2	stalkie_big_nohaplotig	exon	143839700	143839813	99	-	.	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 2239 2352 +
Chr2	stalkie_big_nohaplotig	exon	143839871	143840001	96	-	.	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 2108 2238 +
Chr2	stalkie_big_nohaplotig	exon	143840211	143840304	98	-	.	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 2014 2107 +
Chr2	stalkie_big_nohaplotig	exon	143840423	143840497	100	-	.	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 1939 2013 +
Chr2	stalkie_big_nohaplotig	exon	143848800	143848934	100	-	.	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 1804 1938 +
Chr2	stalkie_big_nohaplotig	exon	143849001	143849087	98	-	.	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 1717 1803 +
Chr2	stalkie_big_nohaplotig	exon	143849353	143849571	100	-	.	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 1498 1716 +
Chr2	stalkie_big_nohaplotig	exon	143849652	143849880	100	-	.	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 1269 1497 +
Chr2	stalkie_big_nohaplotig	exon	143849940	143850074	99	-	.	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 1134 1268 +
Chr2	stalkie_big_nohaplotig	exon	143850507	143850682	100	-	.	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 958 1133 +
Chr2	stalkie_big_nohaplotig	exon	143850856	143851502	99	-	.	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 311 957 +
Chr2	stalkie_big_nohaplotig	exon	143851577	143851643	100	-	.	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 244 310 +
Chr2	stalkie_big_nohaplotig	exon	143851702	143851939	99	-	.	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 6 243 +
Chr2	stalkie_big_nohaplotig	CDS	143836309	143836407	.	-	0	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 3850 3948 +
Chr2	stalkie_big_nohaplotig	CDS	143836488	143836674	.	-	1	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 3663 3849 +
Chr2	stalkie_big_nohaplotig	CDS	143836736	143836977	.	-	0	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 3421 3662 +
Chr2	stalkie_big_nohaplotig	CDS	143837045	143837468	.	-	1	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 2997 3420 +
Chr2	stalkie_big_nohaplotig	CDS	143838706	143839064	.	-	0	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 2638 2996 +
Chr2	stalkie_big_nohaplotig	CDS	143839131	143839272	.	-	1	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 2496 2637 +
Chr2	stalkie_big_nohaplotig	CDS	143839338	143839480	.	-	0	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 2353 2495 +
Chr2	stalkie_big_nohaplotig	CDS	143839700	143839813	.	-	0	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 2239 2352 +
Chr2	stalkie_big_nohaplotig	CDS	143839871	143840001	.	-	2	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 2108 2238 +
Chr2	stalkie_big_nohaplotig	CDS	143840211	143840304	.	-	0	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 2014 2107 +
Chr2	stalkie_big_nohaplotig	CDS	143840423	143840497	.	-	0	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 1939 2013 +
Chr2	stalkie_big_nohaplotig	CDS	143848800	143848934	.	-	0	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 1804 1938 +
Chr2	stalkie_big_nohaplotig	CDS	143849001	143849087	.	-	0	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 1717 1803 +
Chr2	stalkie_big_nohaplotig	CDS	143849353	143849571	.	-	0	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 1498 1716 +
Chr2	stalkie_big_nohaplotig	CDS	143849652	143849880	.	-	1	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 1269 1497 +
Chr2	stalkie_big_nohaplotig	CDS	143849940	143850074	.	-	1	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 1134 1268 +
Chr2	stalkie_big_nohaplotig	CDS	143850507	143850682	.	-	0	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 958 1133 +
Chr2	stalkie_big_nohaplotig	CDS	143850856	143851502	.	-	2	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 311 957 +
Chr2	stalkie_big_nohaplotig	CDS	143851577	143851643	.	-	0	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 244 310 +
Chr2	stalkie_big_nohaplotig	CDS	143851702	143851938	.	-	0	Parent=FBgn0000313.1.mrna1;Target=FBgn0000313.1 7 243 +
Chr2	gffcl	locus	143837928	143838352	.	+	.	ID=RLOC_00022347;geneIDs=comp139193_c0_seq1.path1;transcripts=comp139193_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143837928	143838352	.	+	.	ID=comp139193_c0_seq1.mrna1;geneID=comp139193_c0_seq1.path1;Name=comp139193_c0_seq1;Dir=indeterminatecoverage=77.8;identity=95.1;matches=404;mismatches=20;indels=1;unknowns=0;Target=comp139193_c0_seq1 545 122 .;CDS_Target=comp139193_c0_seq1 332 219 .;locus=RLOC_00022347
Chr2	stalkie_big_nohaplotig	exon	143837928	143838352	95	+	.	Parent=comp139193_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143838025	143838138	.	+	0	Parent=comp139193_c0_seq1.mrna1
Chr2	gffcl	locus	143841575	143843422	.	+	.	ID=RLOC_00022348;geneIDs=comp162905_c1_seq1.path1;transcripts=comp162905_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143841575	143843422	.	+	.	ID=comp162905_c1_seq1.mrna1;geneID=comp162905_c1_seq1.path1;Name=comp162905_c1_seq1;Dir=antisensecoverage=99.9;identity=99.1;matches=1714;mismatches=16;indels=0;unknowns=0;locus=RLOC_00022348
Chr2	stalkie_big_nohaplotig	exon	143841575	143842314	99	+	.	Parent=comp162905_c1_seq1.mrna1;Target=comp162905_c1_seq1 992 1731 -
Chr2	stalkie_big_nohaplotig	exon	143842373	143842543	98	+	.	Parent=comp162905_c1_seq1.mrna1;Target=comp162905_c1_seq1 821 991 -
Chr2	stalkie_big_nohaplotig	exon	143842604	143843422	99	+	.	Parent=comp162905_c1_seq1.mrna1;Target=comp162905_c1_seq1 2 820 -
Chr2	stalkie_big_nohaplotig	CDS	143842060	143842314	.	+	0	Parent=comp162905_c1_seq1.mrna1;Target=comp162905_c1_seq1 992 1246 .
Chr2	stalkie_big_nohaplotig	CDS	143842373	143842543	.	+	0	Parent=comp162905_c1_seq1.mrna1;Target=comp162905_c1_seq1 821 991 .
Chr2	stalkie_big_nohaplotig	CDS	143842604	143843422	.	+	0	Parent=comp162905_c1_seq1.mrna1;Target=comp162905_c1_seq1 2 820 .
Chr2	gffcl	locus	143858726	143864643	.	-	.	ID=RLOC_00022349;geneIDs=FBgn0061476.1.path1,comp160181_c1_seq1.path1;transcripts=FBgn0061476.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143858728	143864643	.	-	.	ID=FBgn0061476.1.mrna1;geneID=FBgn0061476.1.path1;Name=FBgn0061476.1;Dir=sensecoverage=100.0;identity=99.9;matches=1936;mismatches=1;indels=0;unknowns=13;locus=RLOC_00022349
Chr2	stalkie_big_nohaplotig	exon	143858728	143858786	100	-	.	Parent=FBgn0061476.1.mrna1;Target=FBgn0061476.1 1892 1950 +
Chr2	stalkie_big_nohaplotig	exon	143858850	143858977	100	-	.	Parent=FBgn0061476.1.mrna1;Target=FBgn0061476.1 1764 1891 +
Chr2	stalkie_big_nohaplotig	exon	143861544	143861673	100	-	.	Parent=FBgn0061476.1.mrna1;Target=FBgn0061476.1 1634 1763 +
Chr2	stalkie_big_nohaplotig	exon	143861736	143862004	100	-	.	Parent=FBgn0061476.1.mrna1;Target=FBgn0061476.1 1365 1633 +
Chr2	stalkie_big_nohaplotig	exon	143862234	143862430	100	-	.	Parent=FBgn0061476.1.mrna1;Target=FBgn0061476.1 1168 1364 +
Chr2	stalkie_big_nohaplotig	exon	143863300	143863373	100	-	.	Parent=FBgn0061476.1.mrna1;Target=FBgn0061476.1 1094 1167 +
Chr2	stalkie_big_nohaplotig	exon	143863446	143863618	100	-	.	Parent=FBgn0061476.1.mrna1;Target=FBgn0061476.1 921 1093 +
Chr2	stalkie_big_nohaplotig	exon	143863670	143864397	99	-	.	Parent=FBgn0061476.1.mrna1;Target=FBgn0061476.1 193 920 +
Chr2	stalkie_big_nohaplotig	exon	143864452	143864643	100	-	.	Parent=FBgn0061476.1.mrna1;Target=FBgn0061476.1 1 192 +
Chr2	stalkie_big_nohaplotig	CDS	143858728	143858786	.	-	2	Parent=FBgn0061476.1.mrna1;Target=FBgn0061476.1 1892 1950 +
Chr2	stalkie_big_nohaplotig	CDS	143858850	143858977	.	-	1	Parent=FBgn0061476.1.mrna1;Target=FBgn0061476.1 1764 1891 +
Chr2	stalkie_big_nohaplotig	CDS	143861544	143861673	.	-	2	Parent=FBgn0061476.1.mrna1;Target=FBgn0061476.1 1634 1763 +
Chr2	stalkie_big_nohaplotig	CDS	143861736	143862004	.	-	1	Parent=FBgn0061476.1.mrna1;Target=FBgn0061476.1 1365 1633 +
Chr2	stalkie_big_nohaplotig	CDS	143862234	143862430	.	-	0	Parent=FBgn0061476.1.mrna1;Target=FBgn0061476.1 1168 1364 +
Chr2	stalkie_big_nohaplotig	CDS	143863300	143863373	.	-	2	Parent=FBgn0061476.1.mrna1;Target=FBgn0061476.1 1094 1167 +
Chr2	stalkie_big_nohaplotig	CDS	143863446	143863618	.	-	1	Parent=FBgn0061476.1.mrna1;Target=FBgn0061476.1 921 1093 +
Chr2	stalkie_big_nohaplotig	CDS	143863670	143864397	.	-	0	Parent=FBgn0061476.1.mrna1;Target=FBgn0061476.1 193 920 +
Chr2	stalkie_big_nohaplotig	CDS	143864452	143864643	.	-	0	Parent=FBgn0061476.1.mrna1;Target=FBgn0061476.1 1 192 +
Chr2	gffcl	locus	143859725	143861192	.	+	.	ID=RLOC_00022350;geneIDs=comp152222_c0_seq1.path1;transcripts=comp152222_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143859725	143861192	.	+	.	ID=comp152222_c0_seq1.mrna1;geneID=comp152222_c0_seq1.path1;Name=comp152222_c0_seq1;Dir=sensecoverage=96.0;identity=99.4;matches=707;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022350
Chr2	stalkie_big_nohaplotig	exon	143859725	143859862	99	+	.	Parent=comp152222_c0_seq1.mrna1;Target=comp152222_c0_seq1 26 163 +
Chr2	stalkie_big_nohaplotig	exon	143860620	143861192	99	+	.	Parent=comp152222_c0_seq1.mrna1;Target=comp152222_c0_seq1 164 736 +
Chr2	stalkie_big_nohaplotig	CDS	143859758	143859862	.	+	0	Parent=comp152222_c0_seq1.mrna1;Target=comp152222_c0_seq1 59 163 +
Chr2	stalkie_big_nohaplotig	CDS	143860620	143861111	.	+	0	Parent=comp152222_c0_seq1.mrna1;Target=comp152222_c0_seq1 164 655 +
Chr2	gffcl	locus	143866065	143867102	.	+	.	ID=RLOC_00022351;geneIDs=FBgn0039828.1.path1;transcripts=FBgn0039828.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143866065	143867102	.	+	.	ID=FBgn0039828.1.mrna1;geneID=FBgn0039828.1.path1;Name=FBgn0039828.1;Dir=sensecoverage=100.0;identity=99.9;matches=920;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022351
Chr2	stalkie_big_nohaplotig	exon	143866065	143866139	100	+	.	Parent=FBgn0039828.1.mrna1;Target=FBgn0039828.1 1 75 +
Chr2	stalkie_big_nohaplotig	exon	143866198	143866281	100	+	.	Parent=FBgn0039828.1.mrna1;Target=FBgn0039828.1 76 159 +
Chr2	stalkie_big_nohaplotig	exon	143866341	143867102	99	+	.	Parent=FBgn0039828.1.mrna1;Target=FBgn0039828.1 160 921 +
Chr2	stalkie_big_nohaplotig	CDS	143866065	143866139	.	+	0	Parent=FBgn0039828.1.mrna1;Target=FBgn0039828.1 1 75 +
Chr2	stalkie_big_nohaplotig	CDS	143866198	143866281	.	+	0	Parent=FBgn0039828.1.mrna1;Target=FBgn0039828.1 76 159 +
Chr2	stalkie_big_nohaplotig	CDS	143866341	143867102	.	+	0	Parent=FBgn0039828.1.mrna1;Target=FBgn0039828.1 160 921 +
Chr2	gffcl	locus	143867431	143868618	.	-	.	ID=RLOC_00022352;geneIDs=FBgn0039829.1.path1;transcripts=FBgn0039829.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143867431	143868618	.	-	.	ID=FBgn0039829.1.mrna1;geneID=FBgn0039829.1.path1;Name=FBgn0039829.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1188;mismatches=0;indels=0;unknowns=0;Target=FBgn0039829.1 1188 1 .;locus=RLOC_00022352
Chr2	stalkie_big_nohaplotig	exon	143867431	143868618	100	-	.	Parent=FBgn0039829.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143867431	143868618	.	-	0	Parent=FBgn0039829.1.mrna1
Chr2	gffcl	locus	143871701	143873637	.	.	.	ID=RLOC_00022353;geneIDs=FBgn0039830.1.path1,comp128619_c0_seq1.path1,comp136028_c0_seq1.path1;transcripts=FBgn0039830.1.mrna1,comp128619_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143871701	143873637	.	-	.	ID=FBgn0039830.1.mrna1;geneID=FBgn0039830.1.path1;Name=FBgn0039830.1;Dir=sensecoverage=100.0;identity=100.0;matches=429;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022353
Chr2	stalkie_big_nohaplotig	exon	143871701	143871861	100	-	.	Parent=FBgn0039830.1.mrna1;Target=FBgn0039830.1 269 429 +
Chr2	stalkie_big_nohaplotig	exon	143872509	143872713	100	-	.	Parent=FBgn0039830.1.mrna1;Target=FBgn0039830.1 64 268 +
Chr2	stalkie_big_nohaplotig	exon	143873575	143873637	100	-	.	Parent=FBgn0039830.1.mrna1;Target=FBgn0039830.1 1 63 +
Chr2	stalkie_big_nohaplotig	CDS	143871701	143871861	.	-	2	Parent=FBgn0039830.1.mrna1;Target=FBgn0039830.1 269 429 +
Chr2	stalkie_big_nohaplotig	CDS	143872509	143872713	.	-	0	Parent=FBgn0039830.1.mrna1;Target=FBgn0039830.1 64 268 +
Chr2	stalkie_big_nohaplotig	CDS	143873575	143873637	.	-	0	Parent=FBgn0039830.1.mrna1;Target=FBgn0039830.1 1 63 +
Chr2	stalkie_big_nohaplotig	mRNA	143871924	143872324	.	+	.	ID=comp128619_c0_seq1.mrna1;geneID=comp128619_c0_seq1.path1;Name=comp128619_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.5;matches=399;mismatches=2;indels=0;unknowns=0;Target=comp128619_c0_seq1 401 1 .;CDS_Target=comp128619_c0_seq1 127 2 .;locus=RLOC_00022353
Chr2	stalkie_big_nohaplotig	exon	143871924	143872324	99	+	.	Parent=comp128619_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143871925	143872050	.	+	0	Parent=comp128619_c0_seq1.mrna1
Chr2	gffcl	locus	143873663	143874377	.	+	.	ID=RLOC_00022354;geneIDs=comp120339_c0_seq1.path1,comp151318_c0_seq1.path1;transcripts=comp120339_c0_seq1.mrna1,comp151318_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143873663	143874377	.	+	.	ID=comp120339_c0_seq1.mrna1;geneID=comp120339_c0_seq1.path1;Name=comp120339_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=453;mismatches=2;indels=0;unknowns=0;Target=comp120339_c0_seq1 306 91 .;locus=RLOC_00022354
Chr2	stalkie_big_nohaplotig	exon	143873663	143873687	92	+	.	Parent=comp120339_c0_seq1.mrna1;Target=comp120339_c0_seq1 25 1 .
Chr2	stalkie_big_nohaplotig	exon	143873948	143874377	100	+	.	Parent=comp120339_c0_seq1.mrna1;Target=comp120339_c0_seq1 455 26 .
Chr2	stalkie_big_nohaplotig	CDS	143874013	143874228	.	+	0	Parent=comp120339_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143873664	143873969	.	+	.	ID=comp151318_c0_seq1.mrna1;geneID=comp151318_c0_seq1.path1;Name=comp151318_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=306;mismatches=0;indels=0;unknowns=0;Target=comp151318_c0_seq1 306 1 .;CDS_Target=comp151318_c0_seq1 39 1 .;locus=RLOC_00022354
Chr2	stalkie_big_nohaplotig	exon	143873664	143873969	100	+	.	Parent=comp151318_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143873664	143873702	.	+	0	Parent=comp151318_c0_seq1.mrna1
Chr2	gffcl	locus	143907510	143907729	.	+	.	ID=RLOC_00022356;geneIDs=comp142882_c0_seq1.path1;transcripts=comp142882_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143907510	143907729	.	+	.	ID=comp142882_c0_seq1.mrna1;geneID=comp142882_c0_seq1.path1;Name=comp142882_c0_seq1;Dir=indeterminatecoverage=69.5;identity=98.2;matches=219;mismatches=1;indels=3;unknowns=0;Target=comp142882_c0_seq1 230 8 .;CDS_Target=comp142882_c0_seq1 115 8 .;locus=RLOC_00022356
Chr2	stalkie_big_nohaplotig	exon	143907510	143907729	98	+	.	Parent=comp142882_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143907510	143907614	.	+	0	Parent=comp142882_c0_seq1.mrna1
Chr2	gffcl	locus	143909825	143910337	.	+	.	ID=RLOC_00022357;geneIDs=comp152051_c0_seq1.path1;transcripts=comp152051_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143909825	143910337	.	+	.	ID=comp152051_c0_seq1.mrna1;geneID=comp152051_c0_seq1.path1;Name=comp152051_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.3;matches=507;mismatches=4;indels=21;unknowns=0;Target=comp152051_c0_seq1 530 1 .;CDS_Target=comp152051_c0_seq1 5 3 .;locus=RLOC_00022357
Chr2	stalkie_big_nohaplotig	exon	143909825	143910337	95	+	.	Parent=comp152051_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143909827	143909829	.	+	0	Parent=comp152051_c0_seq1.mrna1
Chr2	gffcl	locus	143913379	143913641	.	+	.	ID=RLOC_00022358;geneIDs=comp85234_c0_seq1.path1;transcripts=comp85234_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143913379	143913641	.	+	.	ID=comp85234_c0_seq1.mrna1;geneID=comp85234_c0_seq1.path1;Name=comp85234_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.5;matches=260;mismatches=3;indels=1;unknowns=0;Target=comp85234_c0_seq1 265 2 .;CDS_Target=comp85234_c0_seq1 87 4 .;locus=RLOC_00022358
Chr2	stalkie_big_nohaplotig	exon	143913379	143913641	98	+	.	Parent=comp85234_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143913381	143913463	.	+	0	Parent=comp85234_c0_seq1.mrna1
Chr2	gffcl	locus	143916072	143920542	.	-	.	ID=RLOC_00022359;geneIDs=FBgn0261241.1.path1;transcripts=FBgn0261241.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143916072	143920542	.	-	.	ID=FBgn0261241.1.mrna1;geneID=FBgn0261241.1.path1;Name=FBgn0261241.1;Dir=sensecoverage=100.0;identity=99.1;matches=2543;mismatches=22;indels=0;unknowns=0;locus=RLOC_00022359
Chr2	stalkie_big_nohaplotig	exon	143916072	143916216	100	-	.	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 2421 2565 +
Chr2	stalkie_big_nohaplotig	exon	143916283	143916483	98	-	.	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 2220 2420 +
Chr2	stalkie_big_nohaplotig	exon	143917410	143917541	98	-	.	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 2088 2219 +
Chr2	stalkie_big_nohaplotig	exon	143917605	143917876	99	-	.	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 1816 2087 +
Chr2	stalkie_big_nohaplotig	exon	143917933	143918094	98	-	.	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 1654 1815 +
Chr2	stalkie_big_nohaplotig	exon	143918167	143918288	100	-	.	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 1532 1653 +
Chr2	stalkie_big_nohaplotig	exon	143918353	143918501	98	-	.	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 1383 1531 +
Chr2	stalkie_big_nohaplotig	exon	143918822	143918949	98	-	.	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 1255 1382 +
Chr2	stalkie_big_nohaplotig	exon	143919003	143919691	99	-	.	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 566 1254 +
Chr2	stalkie_big_nohaplotig	exon	143919755	143919884	100	-	.	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 436 565 +
Chr2	stalkie_big_nohaplotig	exon	143919941	143920087	100	-	.	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 289 435 +
Chr2	stalkie_big_nohaplotig	exon	143920191	143920380	98	-	.	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 99 288 +
Chr2	stalkie_big_nohaplotig	exon	143920445	143920542	98	-	.	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 1 98 +
Chr2	stalkie_big_nohaplotig	CDS	143916072	143916216	.	-	1	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 2421 2565 +
Chr2	stalkie_big_nohaplotig	CDS	143916283	143916483	.	-	1	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 2220 2420 +
Chr2	stalkie_big_nohaplotig	CDS	143917410	143917541	.	-	1	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 2088 2219 +
Chr2	stalkie_big_nohaplotig	CDS	143917605	143917876	.	-	0	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 1816 2087 +
Chr2	stalkie_big_nohaplotig	CDS	143917933	143918094	.	-	0	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 1654 1815 +
Chr2	stalkie_big_nohaplotig	CDS	143918167	143918288	.	-	2	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 1532 1653 +
Chr2	stalkie_big_nohaplotig	CDS	143918353	143918501	.	-	1	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 1383 1531 +
Chr2	stalkie_big_nohaplotig	CDS	143918822	143918949	.	-	0	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 1255 1382 +
Chr2	stalkie_big_nohaplotig	CDS	143919003	143919691	.	-	2	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 566 1254 +
Chr2	stalkie_big_nohaplotig	CDS	143919755	143919884	.	-	0	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 436 565 +
Chr2	stalkie_big_nohaplotig	CDS	143919941	143920087	.	-	0	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 289 435 +
Chr2	stalkie_big_nohaplotig	CDS	143920191	143920380	.	-	1	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 99 288 +
Chr2	stalkie_big_nohaplotig	CDS	143920445	143920542	.	-	0	Parent=FBgn0261241.1.mrna1;Target=FBgn0261241.1 1 98 +
Chr2	gffcl	locus	143943544	143943830	.	+	.	ID=RLOC_00022362;geneIDs=FBgn0020647.1.path1;transcripts=FBgn0020647.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143943544	143943830	.	+	.	ID=FBgn0020647.1.mrna1;geneID=FBgn0020647.1.path1;Name=FBgn0020647.1;Dir=indeterminatecoverage=8.4;identity=99.0;matches=284;mismatches=3;indels=0;unknowns=0;Target=FBgn0020647.1 287 1 .;locus=RLOC_00022362
Chr2	stalkie_big_nohaplotig	exon	143943544	143943830	98	+	.	Parent=FBgn0020647.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143943544	143943830	.	+	0	Parent=FBgn0020647.1.mrna1
Chr2	gffcl	locus	143987839	143991989	.	+	.	ID=RLOC_00022363;geneIDs=FBgn0037405.1.path1;transcripts=FBgn0037405.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143987839	143991989	.	+	.	ID=FBgn0037405.1.mrna1;geneID=FBgn0037405.1.path1;Name=FBgn0037405.1;Dir=sensecoverage=100.0;identity=98.7;matches=2389;mismatches=32;indels=0;unknowns=0;locus=RLOC_00022363
Chr2	stalkie_big_nohaplotig	exon	143987839	143988094	99	+	.	Parent=FBgn0037405.1.mrna1;Target=FBgn0037405.1 1 256 +
Chr2	stalkie_big_nohaplotig	exon	143988159	143988317	98	+	.	Parent=FBgn0037405.1.mrna1;Target=FBgn0037405.1 257 415 +
Chr2	stalkie_big_nohaplotig	exon	143988399	143988587	98	+	.	Parent=FBgn0037405.1.mrna1;Target=FBgn0037405.1 416 604 +
Chr2	stalkie_big_nohaplotig	exon	143988688	143989980	97	+	.	Parent=FBgn0037405.1.mrna1;Target=FBgn0037405.1 605 1897 +
Chr2	stalkie_big_nohaplotig	exon	143991319	143991471	100	+	.	Parent=FBgn0037405.1.mrna1;Target=FBgn0037405.1 1898 2050 +
Chr2	stalkie_big_nohaplotig	exon	143991535	143991879	100	+	.	Parent=FBgn0037405.1.mrna1;Target=FBgn0037405.1 2051 2395 +
Chr2	stalkie_big_nohaplotig	exon	143991964	143991989	100	+	.	Parent=FBgn0037405.1.mrna1;Target=FBgn0037405.1 2396 2421 +
Chr2	stalkie_big_nohaplotig	CDS	143987890	143988094	.	+	0	Parent=FBgn0037405.1.mrna1;Target=FBgn0037405.1 52 256 +
Chr2	stalkie_big_nohaplotig	CDS	143988159	143988317	.	+	2	Parent=FBgn0037405.1.mrna1;Target=FBgn0037405.1 257 415 +
Chr2	stalkie_big_nohaplotig	CDS	143988399	143988587	.	+	2	Parent=FBgn0037405.1.mrna1;Target=FBgn0037405.1 416 604 +
Chr2	stalkie_big_nohaplotig	CDS	143988688	143989980	.	+	2	Parent=FBgn0037405.1.mrna1;Target=FBgn0037405.1 605 1897 +
Chr2	stalkie_big_nohaplotig	CDS	143991319	143991471	.	+	2	Parent=FBgn0037405.1.mrna1;Target=FBgn0037405.1 1898 2050 +
Chr2	stalkie_big_nohaplotig	CDS	143991535	143991879	.	+	2	Parent=FBgn0037405.1.mrna1;Target=FBgn0037405.1 2051 2395 +
Chr2	stalkie_big_nohaplotig	CDS	143991964	143991989	.	+	2	Parent=FBgn0037405.1.mrna1;Target=FBgn0037405.1 2396 2421 +
Chr2	gffcl	locus	143992608	143995724	.	+	.	ID=RLOC_00022364;geneIDs=FBgn0053108.1.path1;transcripts=FBgn0053108.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143992608	143995724	.	+	.	ID=FBgn0053108.1.mrna1;geneID=FBgn0053108.1.path1;Name=FBgn0053108.1;Dir=sensecoverage=100.0;identity=99.5;matches=755;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022364
Chr2	stalkie_big_nohaplotig	exon	143992608	143993050	99	+	.	Parent=FBgn0053108.1.mrna1;Target=FBgn0053108.1 1 443 +
Chr2	stalkie_big_nohaplotig	exon	143995249	143995345	100	+	.	Parent=FBgn0053108.1.mrna1;Target=FBgn0053108.1 444 540 +
Chr2	stalkie_big_nohaplotig	exon	143995506	143995724	99	+	.	Parent=FBgn0053108.1.mrna1;Target=FBgn0053108.1 541 759 +
Chr2	stalkie_big_nohaplotig	CDS	143992608	143993050	.	+	0	Parent=FBgn0053108.1.mrna1;Target=FBgn0053108.1 1 443 +
Chr2	stalkie_big_nohaplotig	CDS	143995249	143995345	.	+	1	Parent=FBgn0053108.1.mrna1;Target=FBgn0053108.1 444 540 +
Chr2	stalkie_big_nohaplotig	CDS	143995506	143995724	.	+	0	Parent=FBgn0053108.1.mrna1;Target=FBgn0053108.1 541 759 +
Chr2	gffcl	locus	143993211	143994892	.	+	.	ID=RLOC_00022365;geneIDs=FBgn0051184.1.path1,comp157740_c0_seq1.path1;transcripts=FBgn0051184.1.mrna1,comp157740_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143993211	143994892	.	+	.	ID=FBgn0051184.1.mrna1;geneID=FBgn0051184.1.path1;Name=FBgn0051184.1;Dir=sensecoverage=100.0;identity=98.4;matches=496;mismatches=8;indels=0;unknowns=0;locus=RLOC_00022365
Chr2	stalkie_big_nohaplotig	exon	143993211	143993432	98	+	.	Parent=FBgn0051184.1.mrna1;Target=FBgn0051184.1 1 222 +
Chr2	stalkie_big_nohaplotig	exon	143993491	143993598	100	+	.	Parent=FBgn0051184.1.mrna1;Target=FBgn0051184.1 223 330 +
Chr2	stalkie_big_nohaplotig	exon	143994719	143994892	97	+	.	Parent=FBgn0051184.1.mrna1;Target=FBgn0051184.1 331 504 +
Chr2	stalkie_big_nohaplotig	CDS	143993211	143993432	.	+	0	Parent=FBgn0051184.1.mrna1;Target=FBgn0051184.1 1 222 +
Chr2	stalkie_big_nohaplotig	CDS	143993491	143993598	.	+	0	Parent=FBgn0051184.1.mrna1;Target=FBgn0051184.1 223 330 +
Chr2	stalkie_big_nohaplotig	CDS	143994719	143994892	.	+	0	Parent=FBgn0051184.1.mrna1;Target=FBgn0051184.1 331 504 +
Chr2	stalkie_big_nohaplotig	mRNA	143993576	143994083	.	+	.	ID=comp157740_c0_seq1.mrna1;geneID=comp157740_c0_seq1.path1;Name=comp157740_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.8;matches=496;mismatches=12;indels=10;unknowns=0;Target=comp157740_c0_seq1 518 1 .;CDS_Target=comp157740_c0_seq1 154 2 .;locus=RLOC_00022365
Chr2	stalkie_big_nohaplotig	exon	143993576	143994083	95	+	.	Parent=comp157740_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143993577	143993729	.	+	0	Parent=comp157740_c0_seq1.mrna1
Chr2	gffcl	locus	143996155	143996659	.	-	.	ID=RLOC_00022366;geneIDs=comp154966_c0_seq1.path1;transcripts=comp154966_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143996155	143996659	.	-	.	ID=comp154966_c0_seq1.mrna1;geneID=comp154966_c0_seq1.path1;Name=comp154966_c0_seq1;Dir=indeterminatecoverage=50.4;identity=96.0;matches=485;mismatches=11;indels=9;unknowns=0;Target=comp154966_c0_seq1 966 471 .;CDS_Target=comp154966_c0_seq1 484 473 .;locus=RLOC_00022366
Chr2	stalkie_big_nohaplotig	exon	143996155	143996659	96	-	.	Parent=comp154966_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143996644	143996657	.	-	0	Parent=comp154966_c0_seq1.mrna1
Chr2	gffcl	locus	143996846	143998816	.	-	.	ID=RLOC_00022367;geneIDs=comp122907_c0_seq1.path1,comp163076_c0_seq1.path1;transcripts=comp163076_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143996846	143998809	.	-	.	ID=comp163076_c0_seq1.mrna1;geneID=comp163076_c0_seq1.path1;Name=comp163076_c0_seq1;Dir=indeterminatecoverage=97.5;identity=92.2;matches=1829;mismatches=69;indels=86;unknowns=0;Target=comp163076_c0_seq1 1918 1 .;CDS_Target=comp163076_c0_seq1 282 124 .;locus=RLOC_00022367
Chr2	stalkie_big_nohaplotig	exon	143996846	143998809	92	-	.	Parent=comp163076_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143998479	143998637	.	-	0	Parent=comp163076_c0_seq1.mrna1
Chr2	gffcl	locus	143998872	143999223	.	-	.	ID=RLOC_00022368;geneIDs=comp154994_c0_seq1.path1;transcripts=comp154994_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	143998872	143999223	.	-	.	ID=comp154994_c0_seq1.mrna1;geneID=comp154994_c0_seq1.path1;Name=comp154994_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.5;matches=341;mismatches=11;indels=25;unknowns=0;Target=comp154994_c0_seq1 377 1 .;CDS_Target=comp154994_c0_seq1 39 1 .;locus=RLOC_00022368
Chr2	stalkie_big_nohaplotig	exon	143998872	143999223	90	-	.	Parent=comp154994_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	143999185	143999223	.	-	0	Parent=comp154994_c0_seq1.mrna1
Chr2	gffcl	locus	144000965	144038525	.	-	.	ID=RLOC_00022369;geneIDs=FBgn0020647.1.path2;transcripts=FBgn0020647.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	144000965	144038525	.	-	.	ID=FBgn0020647.1.mrna2;geneID=FBgn0020647.1.path2;Name=FBgn0020647.1;Dir=sensecoverage=91.6;identity=98.6;matches=3101;mismatches=26;indels=18;unknowns=0;locus=RLOC_00022369
Chr2	stalkie_big_nohaplotig	exon	144000965	144001092	100	-	.	Parent=FBgn0020647.1.mrna2;Target=FBgn0020647.1 3305 3432 +
Chr2	stalkie_big_nohaplotig	exon	144002335	144002451	100	-	.	Parent=FBgn0020647.1.mrna2;Target=FBgn0020647.1 3188 3304 +
Chr2	stalkie_big_nohaplotig	exon	144002517	144003039	98	-	.	Parent=FBgn0020647.1.mrna2;Target=FBgn0020647.1 2665 3187 +
Chr2	stalkie_big_nohaplotig	exon	144003110	144003587	98	-	.	Parent=FBgn0020647.1.mrna2;Target=FBgn0020647.1 2187 2664 +
Chr2	stalkie_big_nohaplotig	exon	144003656	144004223	98	-	.	Parent=FBgn0020647.1.mrna2;Target=FBgn0020647.1 1619 2186 +
Chr2	stalkie_big_nohaplotig	exon	144009601	144009723	100	-	.	Parent=FBgn0020647.1.mrna2;Target=FBgn0020647.1 1496 1618 +
Chr2	stalkie_big_nohaplotig	exon	144011736	144012021	99	-	.	Parent=FBgn0020647.1.mrna2;Target=FBgn0020647.1 1210 1495 +
Chr2	stalkie_big_nohaplotig	exon	144021727	144021983	100	-	.	Parent=FBgn0020647.1.mrna2;Target=FBgn0020647.1 953 1209 +
Chr2	stalkie_big_nohaplotig	exon	144037170	144037417	99	-	.	Parent=FBgn0020647.1.mrna2;Target=FBgn0020647.1 705 952 +
Chr2	stalkie_big_nohaplotig	exon	144038127	144038525	94	-	.	Parent=FBgn0020647.1.mrna2;Target=FBgn0020647.1 288 704 +
Chr2	stalkie_big_nohaplotig	CDS	144000965	144001092	.	-	0	Parent=FBgn0020647.1.mrna2;Target=FBgn0020647.1 3305 3432 +
Chr2	stalkie_big_nohaplotig	CDS	144002335	144002451	.	-	0	Parent=FBgn0020647.1.mrna2;Target=FBgn0020647.1 3188 3304 +
Chr2	stalkie_big_nohaplotig	CDS	144002517	144003039	.	-	1	Parent=FBgn0020647.1.mrna2;Target=FBgn0020647.1 2665 3187 +
Chr2	stalkie_big_nohaplotig	CDS	144003110	144003587	.	-	2	Parent=FBgn0020647.1.mrna2;Target=FBgn0020647.1 2187 2664 +
Chr2	stalkie_big_nohaplotig	CDS	144003656	144004223	.	-	0	Parent=FBgn0020647.1.mrna2;Target=FBgn0020647.1 1619 2186 +
Chr2	stalkie_big_nohaplotig	CDS	144009601	144009723	.	-	0	Parent=FBgn0020647.1.mrna2;Target=FBgn0020647.1 1496 1618 +
Chr2	stalkie_big_nohaplotig	CDS	144011736	144012021	.	-	1	Parent=FBgn0020647.1.mrna2;Target=FBgn0020647.1 1210 1495 +
Chr2	stalkie_big_nohaplotig	CDS	144021727	144021983	.	-	0	Parent=FBgn0020647.1.mrna2;Target=FBgn0020647.1 953 1209 +
Chr2	stalkie_big_nohaplotig	CDS	144037170	144037417	.	-	2	Parent=FBgn0020647.1.mrna2;Target=FBgn0020647.1 705 952 +
Chr2	stalkie_big_nohaplotig	CDS	144038127	144038525	.	-	2	Parent=FBgn0020647.1.mrna2;Target=FBgn0020647.1 288 704 +
Chr2	gffcl	locus	144047693	144048046	.	+	.	ID=RLOC_00022370;geneIDs=comp78010_c0_seq1.path1;transcripts=comp78010_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144047693	144048046	.	+	.	ID=comp78010_c0_seq1.mrna1;geneID=comp78010_c0_seq1.path1;Name=comp78010_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=353;mismatches=1;indels=0;unknowns=0;Target=comp78010_c0_seq1 354 1 .;CDS_Target=comp78010_c0_seq1 268 140 .;locus=RLOC_00022370
Chr2	stalkie_big_nohaplotig	exon	144047693	144048046	99	+	.	Parent=comp78010_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	144047832	144047960	.	+	0	Parent=comp78010_c0_seq1.mrna1
Chr2	gffcl	locus	144060123	144083855	.	+	.	ID=RLOC_00022371;geneIDs=FBgn0051004.1.path1;transcripts=FBgn0051004.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144060123	144083855	.	+	.	ID=FBgn0051004.1.mrna1;geneID=FBgn0051004.1.path1;Name=FBgn0051004.1;Dir=sensecoverage=90.0;identity=99.3;matches=3976;mismatches=28;indels=0;unknowns=0;locus=RLOC_00022371
Chr2	stalkie_big_nohaplotig	exon	144060123	144060358	99	+	.	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 446 681 +
Chr2	stalkie_big_nohaplotig	exon	144060437	144060624	97	+	.	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 682 869 +
Chr2	stalkie_big_nohaplotig	exon	144071075	144071252	100	+	.	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 870 1047 +
Chr2	stalkie_big_nohaplotig	exon	144073638	144073775	96	+	.	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 1048 1185 +
Chr2	stalkie_big_nohaplotig	exon	144075207	144075375	100	+	.	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 1186 1354 +
Chr2	stalkie_big_nohaplotig	exon	144076853	144077110	99	+	.	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 1355 1612 +
Chr2	stalkie_big_nohaplotig	exon	144077371	144077533	99	+	.	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 1613 1775 +
Chr2	stalkie_big_nohaplotig	exon	144077594	144077767	99	+	.	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 1776 1949 +
Chr2	stalkie_big_nohaplotig	exon	144080538	144080660	99	+	.	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 1950 2072 +
Chr2	stalkie_big_nohaplotig	exon	144080897	144081055	99	+	.	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 2073 2231 +
Chr2	stalkie_big_nohaplotig	exon	144081260	144082004	99	+	.	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 2232 2976 +
Chr2	stalkie_big_nohaplotig	exon	144082089	144082507	99	+	.	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 2977 3395 +
Chr2	stalkie_big_nohaplotig	exon	144082606	144082793	98	+	.	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 3396 3583 +
Chr2	stalkie_big_nohaplotig	exon	144082933	144083295	100	+	.	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 3584 3946 +
Chr2	stalkie_big_nohaplotig	exon	144083353	144083855	99	+	.	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 3947 4449 +
Chr2	stalkie_big_nohaplotig	CDS	144060125	144060358	.	+	0	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 448 681 +
Chr2	stalkie_big_nohaplotig	CDS	144060437	144060624	.	+	0	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 682 869 +
Chr2	stalkie_big_nohaplotig	CDS	144071075	144071252	.	+	1	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 870 1047 +
Chr2	stalkie_big_nohaplotig	CDS	144073638	144073775	.	+	0	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 1048 1185 +
Chr2	stalkie_big_nohaplotig	CDS	144075207	144075375	.	+	0	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 1186 1354 +
Chr2	stalkie_big_nohaplotig	CDS	144076853	144077110	.	+	2	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 1355 1612 +
Chr2	stalkie_big_nohaplotig	CDS	144077371	144077533	.	+	2	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 1613 1775 +
Chr2	stalkie_big_nohaplotig	CDS	144077594	144077767	.	+	1	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 1776 1949 +
Chr2	stalkie_big_nohaplotig	CDS	144080538	144080660	.	+	1	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 1950 2072 +
Chr2	stalkie_big_nohaplotig	CDS	144080897	144081055	.	+	1	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 2073 2231 +
Chr2	stalkie_big_nohaplotig	CDS	144081260	144082004	.	+	1	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 2232 2976 +
Chr2	stalkie_big_nohaplotig	CDS	144082089	144082507	.	+	0	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 2977 3395 +
Chr2	stalkie_big_nohaplotig	CDS	144082606	144082793	.	+	1	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 3396 3583 +
Chr2	stalkie_big_nohaplotig	CDS	144082933	144083295	.	+	2	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 3584 3946 +
Chr2	stalkie_big_nohaplotig	CDS	144083353	144083855	.	+	2	Parent=FBgn0051004.1.mrna1;Target=FBgn0051004.1 3947 4449 +
Chr2	gffcl	locus	144086039	144086479	.	-	.	ID=RLOC_00022372;geneIDs=comp148524_c0_seq1.path1;transcripts=comp148524_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144086039	144086479	.	-	.	ID=comp148524_c0_seq1.mrna1;geneID=comp148524_c0_seq1.path1;Name=comp148524_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=434;mismatches=7;indels=2;unknowns=0;Target=comp148524_c0_seq1 443 1 .;CDS_Target=comp148524_c0_seq1 365 270 .;locus=RLOC_00022372
Chr2	stalkie_big_nohaplotig	exon	144086039	144086479	97	-	.	Parent=comp148524_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	144086117	144086212	.	-	0	Parent=comp148524_c0_seq1.mrna1
Chr2	gffcl	locus	144090079	144090505	.	+	.	ID=RLOC_00022373;geneIDs=comp151740_c0_seq1.path1;transcripts=comp151740_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144090079	144090505	.	+	.	ID=comp151740_c0_seq1.mrna1;geneID=comp151740_c0_seq1.path1;Name=comp151740_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=422;mismatches=5;indels=0;unknowns=0;Target=comp151740_c0_seq1 427 1 .;CDS_Target=comp151740_c0_seq1 212 84 .;locus=RLOC_00022373
Chr2	stalkie_big_nohaplotig	exon	144090079	144090505	98	+	.	Parent=comp151740_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	144090162	144090290	.	+	0	Parent=comp151740_c0_seq1.mrna1
Chr2	gffcl	locus	144090814	144091293	.	+	.	ID=RLOC_00022374;geneIDs=comp155381_c0_seq1.path1;transcripts=comp155381_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144090814	144091293	.	+	.	ID=comp155381_c0_seq1.mrna1;geneID=comp155381_c0_seq1.path1;Name=comp155381_c0_seq1;Dir=indeterminatecoverage=99.8;identity=86.1;matches=458;mismatches=8;indels=66;unknowns=0;Target=comp155381_c0_seq1 519 2 .;CDS_Target=comp155381_c0_seq1 204 124 .;locus=RLOC_00022374
Chr2	stalkie_big_nohaplotig	exon	144090814	144091293	86	+	.	Parent=comp155381_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	144090936	144091016	.	+	0	Parent=comp155381_c0_seq1.mrna1
Chr2	gffcl	locus	144091358	144092100	.	-	.	ID=RLOC_00022375;geneIDs=comp158325_c0_seq1.path1;transcripts=comp158325_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144091358	144092100	.	-	.	ID=comp158325_c0_seq1.mrna1;geneID=comp158325_c0_seq1.path1;Name=comp158325_c0_seq1;Dir=indeterminatecoverage=97.3;identity=93.8;matches=708;mismatches=25;indels=22;unknowns=0;Target=comp158325_c0_seq1 764 20 .;CDS_Target=comp158325_c0_seq1 628 374 .;locus=RLOC_00022375
Chr2	stalkie_big_nohaplotig	exon	144091358	144092100	93	-	.	Parent=comp158325_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	144091483	144091745	.	-	0	Parent=comp158325_c0_seq1.mrna1
Chr2	gffcl	locus	144092892	144104927	.	-	.	ID=RLOC_00022376;geneIDs=comp136048_c0_seq1.path1;transcripts=comp136048_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144092892	144104927	.	-	.	ID=comp136048_c0_seq1.mrna1;geneID=comp136048_c0_seq1.path1;Name=comp136048_c0_seq1;Dir=antisensecoverage=96.6;identity=99.8;matches=649;mismatches=1;indels=0;unknowns=0;Target=comp136048_c0_seq1 302 649 .;locus=RLOC_00022376
Chr2	stalkie_big_nohaplotig	exon	144092892	144093074	100	-	.	Parent=comp136048_c0_seq1.mrna1;Target=comp136048_c0_seq1 1 183 -
Chr2	stalkie_big_nohaplotig	exon	144104461	144104927	99	-	.	Parent=comp136048_c0_seq1.mrna1;Target=comp136048_c0_seq1 184 650 -
Chr2	stalkie_big_nohaplotig	CDS	144104579	144104926	.	-	0	Parent=comp136048_c0_seq1.mrna1
Chr2	gffcl	locus	144108867	144134291	.	+	.	ID=RLOC_00022377;geneIDs=FBgn0086704.1.path1;transcripts=FBgn0086704.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144108867	144134291	.	+	.	ID=FBgn0086704.1.mrna1;geneID=FBgn0086704.1.path1;Name=FBgn0086704.1;Dir=sensecoverage=100.0;identity=99.3;matches=1356;mismatches=3;indels=6;unknowns=0;locus=RLOC_00022377
Chr2	stalkie_big_nohaplotig	exon	144108867	144109104	100	+	.	Parent=FBgn0086704.1.mrna1;Target=FBgn0086704.1 1 238 +
Chr2	stalkie_big_nohaplotig	exon	144109364	144109452	100	+	.	Parent=FBgn0086704.1.mrna1;Target=FBgn0086704.1 239 327 +
Chr2	stalkie_big_nohaplotig	exon	144111447	144111546	100	+	.	Parent=FBgn0086704.1.mrna1;Target=FBgn0086704.1 328 427 +
Chr2	stalkie_big_nohaplotig	exon	144115053	144115162	100	+	.	Parent=FBgn0086704.1.mrna1;Target=FBgn0086704.1 428 537 +
Chr2	stalkie_big_nohaplotig	exon	144115236	144115339	99	+	.	Parent=FBgn0086704.1.mrna1;Target=FBgn0086704.1 538 641 +
Chr2	stalkie_big_nohaplotig	exon	144122058	144122153	100	+	.	Parent=FBgn0086704.1.mrna1;Target=FBgn0086704.1 642 737 +
Chr2	stalkie_big_nohaplotig	exon	144125399	144125555	100	+	.	Parent=FBgn0086704.1.mrna1;Target=FBgn0086704.1 738 894 +
Chr2	stalkie_big_nohaplotig	exon	144127536	144127654	99	+	.	Parent=FBgn0086704.1.mrna1;Target=FBgn0086704.1 895 1013 +
Chr2	stalkie_big_nohaplotig	exon	144133946	144134291	98	+	.	Parent=FBgn0086704.1.mrna1;Target=FBgn0086704.1 1014 1365 +
Chr2	stalkie_big_nohaplotig	CDS	144108867	144109104	.	+	0	Parent=FBgn0086704.1.mrna1;Target=FBgn0086704.1 1 238 +
Chr2	stalkie_big_nohaplotig	CDS	144109364	144109452	.	+	2	Parent=FBgn0086704.1.mrna1;Target=FBgn0086704.1 239 327 +
Chr2	stalkie_big_nohaplotig	CDS	144111447	144111546	.	+	0	Parent=FBgn0086704.1.mrna1;Target=FBgn0086704.1 328 427 +
Chr2	stalkie_big_nohaplotig	CDS	144115053	144115162	.	+	2	Parent=FBgn0086704.1.mrna1;Target=FBgn0086704.1 428 537 +
Chr2	stalkie_big_nohaplotig	CDS	144115236	144115339	.	+	0	Parent=FBgn0086704.1.mrna1;Target=FBgn0086704.1 538 641 +
Chr2	stalkie_big_nohaplotig	CDS	144122058	144122153	.	+	1	Parent=FBgn0086704.1.mrna1;Target=FBgn0086704.1 642 737 +
Chr2	stalkie_big_nohaplotig	CDS	144125399	144125555	.	+	1	Parent=FBgn0086704.1.mrna1;Target=FBgn0086704.1 738 894 +
Chr2	stalkie_big_nohaplotig	CDS	144127536	144127654	.	+	0	Parent=FBgn0086704.1.mrna1;Target=FBgn0086704.1 895 1013 +
Chr2	stalkie_big_nohaplotig	CDS	144133946	144134291	.	+	1	Parent=FBgn0086704.1.mrna1;Target=FBgn0086704.1 1014 1365 +
Chr2	gffcl	locus	144207244	144208692	.	-	.	ID=RLOC_00022379;geneIDs=FBgn0032586.3.path1;transcripts=FBgn0032586.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144207244	144208692	.	-	.	ID=FBgn0032586.3.mrna1;geneID=FBgn0032586.3.path1;Name=FBgn0032586.3;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1438;mismatches=11;indels=0;unknowns=0;Target=FBgn0032586.3 1449 1 .;locus=RLOC_00022379
Chr2	stalkie_big_nohaplotig	exon	144207244	144208692	99	-	.	Parent=FBgn0032586.3.mrna1
Chr2	stalkie_big_nohaplotig	CDS	144207244	144208692	.	-	0	Parent=FBgn0032586.3.mrna1
Chr2	gffcl	locus	144215924	144290160	.	.	.	ID=RLOC_00022380;geneIDs=FBgn0039816.1.path1,comp154628_c0_seq1.path1,comp157448_c1_seq1.path1,comp159532_c0_seq1.path1;transcripts=comp159532_c0_seq1.mrna1,FBgn0039816.1.mrna1,comp154628_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144216270	144290160	.	-	.	ID=comp159532_c0_seq1.mrna1;geneID=comp159532_c0_seq1.path1;Name=comp159532_c0_seq1;Dir=antisensecoverage=100.0;identity=96.8;matches=1296;mismatches=17;indels=26;unknowns=0;locus=RLOC_00022380
Chr2	stalkie_big_nohaplotig	exon	144216270	144216620	97	-	.	Parent=comp159532_c0_seq1.mrna1;Target=comp159532_c0_seq1 1 351 -
Chr2	stalkie_big_nohaplotig	exon	144220287	144220376	98	-	.	Parent=comp159532_c0_seq1.mrna1;Target=comp159532_c0_seq1 352 441 -
Chr2	stalkie_big_nohaplotig	exon	144222229	144222240	83	-	.	Parent=comp159532_c0_seq1.mrna1;Target=comp159532_c0_seq1 442 453 -
Chr2	stalkie_big_nohaplotig	exon	144225246	144225253	100	-	.	Parent=comp159532_c0_seq1.mrna1;Target=comp159532_c0_seq1 472 479 -
Chr2	stalkie_big_nohaplotig	exon	144227495	144227506	100	-	.	Parent=comp159532_c0_seq1.mrna1;Target=comp159532_c0_seq1 480 491 -
Chr2	stalkie_big_nohaplotig	exon	144233797	144233804	100	-	.	Parent=comp159532_c0_seq1.mrna1;Target=comp159532_c0_seq1 644 651 -
Chr2	stalkie_big_nohaplotig	exon	144236324	144236335	100	-	.	Parent=comp159532_c0_seq1.mrna1;Target=comp159532_c0_seq1 653 664 -
Chr2	stalkie_big_nohaplotig	exon	144274645	144274647	100	-	.	Parent=comp159532_c0_seq1.mrna1;Target=comp159532_c0_seq1 885 887 -
Chr2	stalkie_big_nohaplotig	exon	144285074	144285076	100	-	.	Parent=comp159532_c0_seq1.mrna1;Target=comp159532_c0_seq1 888 890 -
Chr2	stalkie_big_nohaplotig	exon	144285630	144286264	95	-	.	Parent=comp159532_c0_seq1.mrna1;Target=comp159532_c0_seq1 891 1520 -
Chr2	stalkie_big_nohaplotig	exon	144289968	144290160	98	-	.	Parent=comp159532_c0_seq1.mrna1;Target=comp159532_c0_seq1 1521 1712 -
Chr2	stalkie_big_nohaplotig	CDS	144216418	144216620	.	-	2	Parent=comp159532_c0_seq1.mrna1;Target=comp159532_c0_seq1 149 351 .
Chr2	stalkie_big_nohaplotig	CDS	144220287	144220356	.	-	0	Parent=comp159532_c0_seq1.mrna1;Target=comp159532_c0_seq1 352 421 .
Chr2	stalkie_big_nohaplotig	mRNA	144216431	144285788	.	-	.	ID=FBgn0039816.1.mrna1;geneID=FBgn0039816.1.path1;Name=FBgn0039816.1;Dir=sensecoverage=100.0;identity=78.0;matches=600;mismatches=67;indels=102;unknowns=53;locus=RLOC_00022380
Chr2	stalkie_big_nohaplotig	exon	144216431	144216620	98	-	.	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 684 873 +
Chr2	stalkie_big_nohaplotig	exon	144220287	144220375	100	-	.	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 595 683 +
Chr2	stalkie_big_nohaplotig	exon	144228446	144228456	16	-	.	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 530 594 +
Chr2	stalkie_big_nohaplotig	exon	144250003	144250007	100	-	.	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 525 529 +
Chr2	stalkie_big_nohaplotig	exon	144252228	144252246	73	-	.	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 506 524 +
Chr2	stalkie_big_nohaplotig	exon	144256652	144256666	87	-	.	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 490 505 +
Chr2	stalkie_big_nohaplotig	exon	144264790	144264808	73	-	.	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 474 489 +
Chr2	stalkie_big_nohaplotig	exon	144269605	144269727	52	-	.	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 337 473 +
Chr2	stalkie_big_nohaplotig	exon	144276003	144276010	100	-	.	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 280 287 +
Chr2	stalkie_big_nohaplotig	exon	144278507	144278577	57	-	.	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 215 277 +
Chr2	stalkie_big_nohaplotig	exon	144278621	144278673	100	-	.	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 140 192 +
Chr2	stalkie_big_nohaplotig	exon	144285650	144285788	100	-	.	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 1 139 +
Chr2	stalkie_big_nohaplotig	CDS	144216431	144216620	.	-	0	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 684 873 +
Chr2	stalkie_big_nohaplotig	CDS	144220287	144220375	.	-	2	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 595 683 +
Chr2	stalkie_big_nohaplotig	CDS	144228446	144228456	.	-	1	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 530 594 +
Chr2	stalkie_big_nohaplotig	CDS	144250003	144250007	.	-	0	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 525 529 +
Chr2	stalkie_big_nohaplotig	CDS	144252228	144252246	.	-	1	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 506 524 +
Chr2	stalkie_big_nohaplotig	CDS	144256652	144256666	.	-	1	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 490 505 +
Chr2	stalkie_big_nohaplotig	CDS	144264790	144264808	.	-	2	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 474 489 +
Chr2	stalkie_big_nohaplotig	CDS	144269605	144269727	.	-	2	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 337 473 +
Chr2	stalkie_big_nohaplotig	CDS	144276003	144276010	.	-	1	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 280 287 +
Chr2	stalkie_big_nohaplotig	CDS	144278507	144278577	.	-	0	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 215 277 +
Chr2	stalkie_big_nohaplotig	CDS	144278621	144278673	.	-	2	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 140 192 +
Chr2	stalkie_big_nohaplotig	CDS	144285650	144285788	.	-	0	Parent=FBgn0039816.1.mrna1;Target=FBgn0039816.1 1 139 +
Chr2	stalkie_big_nohaplotig	mRNA	144264045	144265083	.	-	.	ID=comp154628_c0_seq1.mrna1;geneID=comp154628_c0_seq1.path1;Name=comp154628_c0_seq1;Dir=antisensecoverage=99.9;identity=97.1;matches=962;mismatches=19;indels=10;unknowns=0;Target=comp154628_c0_seq1 198 350 .;locus=RLOC_00022380
Chr2	stalkie_big_nohaplotig	exon	144264045	144264625	95	-	.	Parent=comp154628_c0_seq1.mrna1;Target=comp154628_c0_seq1 2 592 -
Chr2	stalkie_big_nohaplotig	exon	144264684	144265083	99	-	.	Parent=comp154628_c0_seq1.mrna1;Target=comp154628_c0_seq1 593 992 -
Chr2	stalkie_big_nohaplotig	CDS	144264237	144264389	.	-	0	Parent=comp154628_c0_seq1.mrna1
Chr2	gffcl	locus	144240738	144387067	.	+	.	ID=RLOC_00022381;geneIDs=comp151145_c0_seq1.path1;transcripts=comp151145_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144240738	144387067	.	+	.	ID=comp151145_c0_seq1.mrna1;geneID=comp151145_c0_seq1.path1;Name=comp151145_c0_seq1;Dir=indeterminatecoverage=85.0;identity=96.8;matches=572;mismatches=16;indels=3;unknowns=0;locus=RLOC_00022381
Chr2	stalkie_big_nohaplotig	exon	144240738	144240753	87	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 109 94 .
Chr2	stalkie_big_nohaplotig	exon	144244900	144244904	100	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 114 110 .
Chr2	stalkie_big_nohaplotig	exon	144246475	144246483	100	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 123 115 .
Chr2	stalkie_big_nohaplotig	exon	144246675	144246680	66	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 129 124 .
Chr2	stalkie_big_nohaplotig	exon	144248669	144248671	100	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 132 130 .
Chr2	stalkie_big_nohaplotig	exon	144255566	144255579	85	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 146 133 .
Chr2	stalkie_big_nohaplotig	exon	144262224	144262237	92	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 160 147 .
Chr2	stalkie_big_nohaplotig	exon	144263958	144263966	100	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 173 165 .
Chr2	stalkie_big_nohaplotig	exon	144266083	144266086	100	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 177 174 .
Chr2	stalkie_big_nohaplotig	exon	144269142	144269144	100	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 180 178 .
Chr2	stalkie_big_nohaplotig	exon	144270757	144270763	100	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 187 181 .
Chr2	stalkie_big_nohaplotig	exon	144278867	144278870	100	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 192 189 .
Chr2	stalkie_big_nohaplotig	exon	144309399	144309401	100	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 195 193 .
Chr2	stalkie_big_nohaplotig	exon	144313764	144313772	100	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 204 196 .
Chr2	stalkie_big_nohaplotig	exon	144320349	144320356	100	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 212 205 .
Chr2	stalkie_big_nohaplotig	exon	144320437	144320442	100	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 218 213 .
Chr2	stalkie_big_nohaplotig	exon	144325724	144325731	100	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 226 219 .
Chr2	stalkie_big_nohaplotig	exon	144340816	144340818	100	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 229 227 .
Chr2	stalkie_big_nohaplotig	exon	144344139	144344143	100	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 234 230 .
Chr2	stalkie_big_nohaplotig	exon	144349062	144349063	100	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 236 235 .
Chr2	stalkie_big_nohaplotig	exon	144354303	144354306	100	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 240 237 .
Chr2	stalkie_big_nohaplotig	exon	144361453	144361458	100	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 246 241 .
Chr2	stalkie_big_nohaplotig	exon	144384679	144384691	84	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 259 247 .
Chr2	stalkie_big_nohaplotig	exon	144386638	144387067	97	+	.	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 686 260 .
Chr2	stalkie_big_nohaplotig	CDS	144240739	144240753	.	+	0	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 109 95 .
Chr2	stalkie_big_nohaplotig	CDS	144244900	144244904	.	+	0	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 114 110 .
Chr2	stalkie_big_nohaplotig	CDS	144246475	144246483	.	+	1	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 123 115 .
Chr2	stalkie_big_nohaplotig	CDS	144246675	144246680	.	+	1	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 129 124 .
Chr2	stalkie_big_nohaplotig	CDS	144248669	144248671	.	+	1	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 132 130 .
Chr2	stalkie_big_nohaplotig	CDS	144255566	144255579	.	+	1	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 146 133 .
Chr2	stalkie_big_nohaplotig	CDS	144262224	144262234	.	+	2	Parent=comp151145_c0_seq1.mrna1;Target=comp151145_c0_seq1 157 147 .
Chr2	gffcl	locus	144267050	144268358	.	-	.	ID=RLOC_00022382;geneIDs=ORF1061.path1;transcripts=ORF1061.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144267050	144268358	.	-	.	ID=ORF1061.mrna1;geneID=ORF1061.path1;Name=ORF1061;Dir=sensecoverage=100.0;identity=100.0;matches=1257;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022382
Chr2	stalkie_big_nohaplotig	exon	144267050	144268176	100	-	.	Parent=ORF1061.mrna1;Target=ORF1061 131 1257 +
Chr2	stalkie_big_nohaplotig	exon	144268229	144268358	100	-	.	Parent=ORF1061.mrna1;Target=ORF1061 1 130 +
Chr2	stalkie_big_nohaplotig	CDS	144267050	144268176	.	-	2	Parent=ORF1061.mrna1;Target=ORF1061 131 1257 +
Chr2	stalkie_big_nohaplotig	CDS	144268229	144268358	.	-	0	Parent=ORF1061.mrna1;Target=ORF1061 1 130 +
Chr2	gffcl	locus	144328471	144328968	.	-	.	ID=RLOC_00022383;geneIDs=comp158949_c0_seq1.path1;transcripts=comp158949_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144328471	144328968	.	-	.	ID=comp158949_c0_seq1.mrna1;geneID=comp158949_c0_seq1.path1;Name=comp158949_c0_seq1;Dir=indeterminatecoverage=97.6;identity=96.8;matches=482;mismatches=16;indels=0;unknowns=0;Target=comp158949_c0_seq1 510 13 .;CDS_Target=comp158949_c0_seq1 508 431 .;locus=RLOC_00022383
Chr2	stalkie_big_nohaplotig	exon	144328471	144328968	96	-	.	Parent=comp158949_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	144328473	144328550	.	-	0	Parent=comp158949_c0_seq1.mrna1
Chr2	gffcl	locus	144381255	144382544	.	+	.	ID=RLOC_00022384;geneIDs=FBgn0002413.3.path1;transcripts=FBgn0002413.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144381255	144382544	.	+	.	ID=FBgn0002413.3.mrna1;geneID=FBgn0002413.3.path1;Name=FBgn0002413.3;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1285;mismatches=5;indels=0;unknowns=0;Target=FBgn0002413.3 1290 1 .;locus=RLOC_00022384
Chr2	stalkie_big_nohaplotig	exon	144381255	144382544	99	+	.	Parent=FBgn0002413.3.mrna1
Chr2	stalkie_big_nohaplotig	CDS	144381255	144382544	.	+	0	Parent=FBgn0002413.3.mrna1
Chr2	gffcl	locus	144384733	144385149	.	+	.	ID=RLOC_00022385;geneIDs=comp117695_c0_seq1.path1;transcripts=comp117695_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144384733	144385149	.	+	.	ID=comp117695_c0_seq1.mrna1;geneID=comp117695_c0_seq1.path1;Name=comp117695_c0_seq1;Dir=indeterminatecoverage=99.0;identity=98.8;matches=412;mismatches=1;indels=4;unknowns=0;Target=comp117695_c0_seq1 417 5 .;CDS_Target=comp117695_c0_seq1 81 7 .;locus=RLOC_00022385
Chr2	stalkie_big_nohaplotig	exon	144384733	144385149	98	+	.	Parent=comp117695_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	144384735	144384809	.	+	0	Parent=comp117695_c0_seq1.mrna1
Chr2	gffcl	locus	144387076	144387832	.	+	.	ID=RLOC_00022386;geneIDs=comp161454_c0_seq1.path1;transcripts=comp161454_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144387076	144387832	.	+	.	ID=comp161454_c0_seq1.mrna1;geneID=comp161454_c0_seq1.path1;Name=comp161454_c0_seq1;Dir=indeterminatecoverage=99.6;identity=96.1;matches=739;mismatches=18;indels=12;unknowns=0;Target=comp161454_c0_seq1 772 4 .;CDS_Target=comp161454_c0_seq1 636 505 .;locus=RLOC_00022386
Chr2	stalkie_big_nohaplotig	exon	144387076	144387832	96	+	.	Parent=comp161454_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	144387565	144387696	.	+	0	Parent=comp161454_c0_seq1.mrna1
Chr2	gffcl	locus	144388390	144389075	.	+	.	ID=RLOC_00022387;geneIDs=comp154377_c0_seq1.path1;transcripts=comp154377_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144388390	144389075	.	+	.	ID=comp154377_c0_seq1.mrna1;geneID=comp154377_c0_seq1.path1;Name=comp154377_c0_seq1;Dir=indeterminatecoverage=99.4;identity=98.7;matches=677;mismatches=7;indels=2;unknowns=0;Target=comp154377_c0_seq1 688 5 .;CDS_Target=comp154377_c0_seq1 71 6 .;locus=RLOC_00022387
Chr2	stalkie_big_nohaplotig	exon	144388390	144389075	98	+	.	Parent=comp154377_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	144388391	144388456	.	+	0	Parent=comp154377_c0_seq1.mrna1
Chr2	gffcl	locus	144390698	144391645	.	+	.	ID=RLOC_00022388;geneIDs=FBgn0010808.1.path1;transcripts=FBgn0010808.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144390698	144391645	.	+	.	ID=FBgn0010808.1.mrna1;geneID=FBgn0010808.1.path1;Name=FBgn0010808.1;Dir=sensecoverage=100.0;identity=99.4;matches=710;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022388
Chr2	stalkie_big_nohaplotig	exon	144390698	144390854	100	+	.	Parent=FBgn0010808.1.mrna1;Target=FBgn0010808.1 1 157 +
Chr2	stalkie_big_nohaplotig	exon	144391089	144391645	99	+	.	Parent=FBgn0010808.1.mrna1;Target=FBgn0010808.1 158 714 +
Chr2	stalkie_big_nohaplotig	CDS	144390698	144390854	.	+	0	Parent=FBgn0010808.1.mrna1;Target=FBgn0010808.1 1 157 +
Chr2	stalkie_big_nohaplotig	CDS	144391089	144391645	.	+	2	Parent=FBgn0010808.1.mrna1;Target=FBgn0010808.1 158 714 +
Chr2	gffcl	locus	144393049	144402107	.	-	.	ID=RLOC_00022389;geneIDs=FBgn0016123.1.path1;transcripts=FBgn0016123.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144393049	144402107	.	-	.	ID=FBgn0016123.1.mrna1;geneID=FBgn0016123.1.path1;Name=FBgn0016123.1;Dir=sensecoverage=100.0;identity=98.6;matches=1842;mismatches=27;indels=0;unknowns=0;locus=RLOC_00022389
Chr2	stalkie_big_nohaplotig	exon	144393049	144393702	98	-	.	Parent=FBgn0016123.1.mrna1;Target=FBgn0016123.1 1216 1869 +
Chr2	stalkie_big_nohaplotig	exon	144393767	144394450	97	-	.	Parent=FBgn0016123.1.mrna1;Target=FBgn0016123.1 532 1215 +
Chr2	stalkie_big_nohaplotig	exon	144394509	144394750	98	-	.	Parent=FBgn0016123.1.mrna1;Target=FBgn0016123.1 290 531 +
Chr2	stalkie_big_nohaplotig	exon	144401819	144402107	98	-	.	Parent=FBgn0016123.1.mrna1;Target=FBgn0016123.1 1 289 +
Chr2	stalkie_big_nohaplotig	CDS	144393049	144393702	.	-	0	Parent=FBgn0016123.1.mrna1;Target=FBgn0016123.1 1216 1869 +
Chr2	stalkie_big_nohaplotig	CDS	144393767	144394450	.	-	0	Parent=FBgn0016123.1.mrna1;Target=FBgn0016123.1 532 1215 +
Chr2	stalkie_big_nohaplotig	CDS	144394509	144394750	.	-	2	Parent=FBgn0016123.1.mrna1;Target=FBgn0016123.1 290 531 +
Chr2	stalkie_big_nohaplotig	CDS	144401819	144402107	.	-	0	Parent=FBgn0016123.1.mrna1;Target=FBgn0016123.1 1 289 +
Chr2	gffcl	locus	144412069	144413402	.	+	.	ID=RLOC_00022390;geneIDs=FBgn0038363.1.path1;transcripts=FBgn0038363.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144412069	144413402	.	+	.	ID=FBgn0038363.1.mrna1;geneID=FBgn0038363.1.path1;Name=FBgn0038363.1;Dir=sensecoverage=100.0;identity=99.4;matches=316;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022390
Chr2	stalkie_big_nohaplotig	exon	144412069	144412147	100	+	.	Parent=FBgn0038363.1.mrna1;Target=FBgn0038363.1 1 79 +
Chr2	stalkie_big_nohaplotig	exon	144412205	144412221	100	+	.	Parent=FBgn0038363.1.mrna1;Target=FBgn0038363.1 80 96 +
Chr2	stalkie_big_nohaplotig	exon	144413114	144413223	98	+	.	Parent=FBgn0038363.1.mrna1;Target=FBgn0038363.1 97 206 +
Chr2	stalkie_big_nohaplotig	exon	144413291	144413402	100	+	.	Parent=FBgn0038363.1.mrna1;Target=FBgn0038363.1 207 318 +
Chr2	stalkie_big_nohaplotig	CDS	144412069	144412147	.	+	0	Parent=FBgn0038363.1.mrna1;Target=FBgn0038363.1 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	144412205	144412221	.	+	2	Parent=FBgn0038363.1.mrna1;Target=FBgn0038363.1 80 96 +
Chr2	stalkie_big_nohaplotig	CDS	144413114	144413223	.	+	0	Parent=FBgn0038363.1.mrna1;Target=FBgn0038363.1 97 206 +
Chr2	stalkie_big_nohaplotig	CDS	144413291	144413402	.	+	1	Parent=FBgn0038363.1.mrna1;Target=FBgn0038363.1 207 318 +
Chr2	gffcl	locus	144415986	144426660	.	.	.	ID=RLOC_00022391;geneIDs=FBgn0010015.1.path1,comp146257_c0_seq1.path1;transcripts=FBgn0010015.1.mrna1,comp146257_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144415986	144426660	.	-	.	ID=FBgn0010015.1.mrna1;geneID=FBgn0010015.1.path1;Name=FBgn0010015.1;Dir=sensecoverage=100.0;identity=99.6;matches=1709;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022391
Chr2	stalkie_big_nohaplotig	exon	144415986	144416230	100	-	.	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 1472 1716 +
Chr2	stalkie_big_nohaplotig	exon	144416292	144416389	98	-	.	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 1374 1471 +
Chr2	stalkie_big_nohaplotig	exon	144416453	144416540	96	-	.	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 1286 1373 +
Chr2	stalkie_big_nohaplotig	exon	144419345	144419426	100	-	.	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 1204 1285 +
Chr2	stalkie_big_nohaplotig	exon	144419573	144419698	100	-	.	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 1078 1203 +
Chr2	stalkie_big_nohaplotig	exon	144419821	144419914	100	-	.	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 984 1077 +
Chr2	stalkie_big_nohaplotig	exon	144419982	144420059	100	-	.	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 906 983 +
Chr2	stalkie_big_nohaplotig	exon	144420260	144420399	98	-	.	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 766 905 +
Chr2	stalkie_big_nohaplotig	exon	144421227	144421372	100	-	.	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 620 765 +
Chr2	stalkie_big_nohaplotig	exon	144421439	144421550	99	-	.	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 508 619 +
Chr2	stalkie_big_nohaplotig	exon	144421618	144421946	100	-	.	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 179 507 +
Chr2	stalkie_big_nohaplotig	exon	144426483	144426660	100	-	.	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 1 178 +
Chr2	stalkie_big_nohaplotig	CDS	144415986	144416230	.	-	2	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 1472 1716 +
Chr2	stalkie_big_nohaplotig	CDS	144416292	144416389	.	-	1	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 1374 1471 +
Chr2	stalkie_big_nohaplotig	CDS	144416453	144416540	.	-	2	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 1286 1373 +
Chr2	stalkie_big_nohaplotig	CDS	144419345	144419426	.	-	0	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 1204 1285 +
Chr2	stalkie_big_nohaplotig	CDS	144419573	144419698	.	-	0	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 1078 1203 +
Chr2	stalkie_big_nohaplotig	CDS	144419821	144419914	.	-	1	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 984 1077 +
Chr2	stalkie_big_nohaplotig	CDS	144419982	144420059	.	-	1	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 906 983 +
Chr2	stalkie_big_nohaplotig	CDS	144420260	144420399	.	-	0	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 766 905 +
Chr2	stalkie_big_nohaplotig	CDS	144421227	144421372	.	-	2	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 620 765 +
Chr2	stalkie_big_nohaplotig	CDS	144421439	144421550	.	-	0	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 508 619 +
Chr2	stalkie_big_nohaplotig	CDS	144421618	144421946	.	-	2	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 179 507 +
Chr2	stalkie_big_nohaplotig	CDS	144426483	144426660	.	-	0	Parent=FBgn0010015.1.mrna1;Target=FBgn0010015.1 1 178 +
Chr2	stalkie_big_nohaplotig	mRNA	144416519	144416736	.	+	.	ID=comp146257_c0_seq1.mrna1;geneID=comp146257_c0_seq1.path1;Name=comp146257_c0_seq1;Dir=indeterminatecoverage=86.2;identity=97.7;matches=213;mismatches=5;indels=0;unknowns=0;Target=comp146257_c0_seq1 218 1 .;CDS_Target=comp146257_c0_seq1 57 1 .;locus=RLOC_00022391
Chr2	stalkie_big_nohaplotig	exon	144416519	144416736	97	+	.	Parent=comp146257_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	144416519	144416575	.	+	0	Parent=comp146257_c0_seq1.mrna1
Chr2	gffcl	locus	144490112	144490707	.	+	.	ID=RLOC_00022392;geneIDs=comp89782_c0_seq1.path1;transcripts=comp89782_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144490112	144490707	.	+	.	ID=comp89782_c0_seq1.mrna1;geneID=comp89782_c0_seq1.path1;Name=comp89782_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=594;mismatches=2;indels=0;unknowns=0;Target=comp89782_c0_seq1 596 1 .;CDS_Target=comp89782_c0_seq1 499 383 .;locus=RLOC_00022392
Chr2	stalkie_big_nohaplotig	exon	144490112	144490707	99	+	.	Parent=comp89782_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	144490494	144490610	.	+	0	Parent=comp89782_c0_seq1.mrna1
Chr2	gffcl	locus	144564932	144579919	.	+	.	ID=RLOC_00022393;geneIDs=FBgn0001138.1.path2;transcripts=FBgn0001138.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	144564932	144579919	.	+	.	ID=FBgn0001138.1.mrna2;geneID=FBgn0001138.1.path2;Name=FBgn0001138.1;Dir=sensecoverage=28.0;identity=99.8;matches=542;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022393
Chr2	stalkie_big_nohaplotig	exon	144564932	144565075	100	+	.	Parent=FBgn0001138.1.mrna2;Target=FBgn0001138.1 1396 1539 +
Chr2	stalkie_big_nohaplotig	exon	144576563	144576749	99	+	.	Parent=FBgn0001138.1.mrna2;Target=FBgn0001138.1 1540 1726 +
Chr2	stalkie_big_nohaplotig	exon	144576993	144577180	100	+	.	Parent=FBgn0001138.1.mrna2;Target=FBgn0001138.1 1727 1914 +
Chr2	stalkie_big_nohaplotig	exon	144579896	144579919	100	+	.	Parent=FBgn0001138.1.mrna2;Target=FBgn0001138.1 1915 1938 +
Chr2	stalkie_big_nohaplotig	CDS	144564932	144565075	.	+	0	Parent=FBgn0001138.1.mrna2;Target=FBgn0001138.1 1396 1539 +
Chr2	stalkie_big_nohaplotig	CDS	144576563	144576749	.	+	0	Parent=FBgn0001138.1.mrna2;Target=FBgn0001138.1 1540 1726 +
Chr2	stalkie_big_nohaplotig	CDS	144576993	144577180	.	+	2	Parent=FBgn0001138.1.mrna2;Target=FBgn0001138.1 1727 1914 +
Chr2	stalkie_big_nohaplotig	CDS	144579896	144579919	.	+	0	Parent=FBgn0001138.1.mrna2;Target=FBgn0001138.1 1915 1938 +
Chr2	gffcl	locus	144670042	144671391	.	+	.	ID=RLOC_00022394;geneIDs=FBgn0031314.1.path1;transcripts=FBgn0031314.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144670042	144671391	.	+	.	ID=FBgn0031314.1.mrna1;geneID=FBgn0031314.1.path1;Name=FBgn0031314.1;Dir=sensecoverage=100.0;identity=98.8;matches=1274;mismatches=16;indels=0;unknowns=0;locus=RLOC_00022394
Chr2	stalkie_big_nohaplotig	exon	144670042	144670615	98	+	.	Parent=FBgn0031314.1.mrna1;Target=FBgn0031314.1 1 574 +
Chr2	stalkie_big_nohaplotig	exon	144670676	144671391	99	+	.	Parent=FBgn0031314.1.mrna1;Target=FBgn0031314.1 575 1290 +
Chr2	stalkie_big_nohaplotig	CDS	144670042	144670615	.	+	0	Parent=FBgn0031314.1.mrna1;Target=FBgn0031314.1 1 574 +
Chr2	stalkie_big_nohaplotig	CDS	144670676	144671391	.	+	2	Parent=FBgn0031314.1.mrna1;Target=FBgn0031314.1 575 1290 +
Chr2	gffcl	locus	144679529	144679842	.	+	.	ID=RLOC_00022395;geneIDs=comp143900_c0_seq1.path1;transcripts=comp143900_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144679529	144679842	.	+	.	ID=comp143900_c0_seq1.mrna1;geneID=comp143900_c0_seq1.path1;Name=comp143900_c0_seq1;Dir=indeterminatecoverage=48.9;identity=97.8;matches=307;mismatches=7;indels=0;unknowns=0;Target=comp143900_c0_seq1 642 329 .;CDS_Target=comp143900_c0_seq1 618 331 .;locus=RLOC_00022395
Chr2	stalkie_big_nohaplotig	exon	144679529	144679842	97	+	.	Parent=comp143900_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	144679531	144679818	.	+	0	Parent=comp143900_c0_seq1.mrna1
Chr2	gffcl	locus	144700447	144702345	.	+	.	ID=RLOC_00022396;geneIDs=FBgn0004573.1.path1;transcripts=FBgn0004573.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144700447	144702345	.	+	.	ID=FBgn0004573.1.mrna1;geneID=FBgn0004573.1.path1;Name=FBgn0004573.1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1882;mismatches=11;indels=6;unknowns=0;Target=FBgn0004573.1 1893 1 .;locus=RLOC_00022396
Chr2	stalkie_big_nohaplotig	exon	144700447	144702345	99	+	.	Parent=FBgn0004573.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	144700447	144702345	.	+	0	Parent=FBgn0004573.1.mrna1
Chr2	gffcl	locus	144702576	144703000	.	-	.	ID=RLOC_00022397;geneIDs=comp51471_c0_seq1.path1;transcripts=comp51471_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144702576	144703000	.	-	.	ID=comp51471_c0_seq1.mrna1;geneID=comp51471_c0_seq1.path1;Name=comp51471_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=424;mismatches=1;indels=0;unknowns=0;Target=comp51471_c0_seq1 425 1 .;CDS_Target=comp51471_c0_seq1 118 2 .;locus=RLOC_00022397
Chr2	stalkie_big_nohaplotig	exon	144702576	144703000	99	-	.	Parent=comp51471_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	144702883	144702999	.	-	0	Parent=comp51471_c0_seq1.mrna1
Chr2	gffcl	locus	144715609	144716497	.	-	.	ID=RLOC_00022398;geneIDs=comp149220_c0_seq1.path1;transcripts=comp149220_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144715609	144716497	.	-	.	ID=comp149220_c0_seq1.mrna1;geneID=comp149220_c0_seq1.path1;Name=comp149220_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.8;matches=878;mismatches=11;indels=0;unknowns=0;Target=comp149220_c0_seq1 892 4 .;CDS_Target=comp149220_c0_seq1 747 181 .;locus=RLOC_00022398
Chr2	stalkie_big_nohaplotig	exon	144715609	144716497	98	-	.	Parent=comp149220_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	144715754	144716320	.	-	0	Parent=comp149220_c0_seq1.mrna1
Chr2	gffcl	locus	144736267	144737568	.	-	.	ID=RLOC_00022399;geneIDs=FBgn0016034.2.path1;transcripts=FBgn0016034.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144736267	144737568	.	-	.	ID=FBgn0016034.2.mrna1;geneID=FBgn0016034.2.path1;Name=FBgn0016034.2;Dir=sensecoverage=100.0;identity=98.5;matches=981;mismatches=15;indels=0;unknowns=0;locus=RLOC_00022399
Chr2	stalkie_big_nohaplotig	exon	144736267	144736491	96	-	.	Parent=FBgn0016034.2.mrna1;Target=FBgn0016034.2 772 996 +
Chr2	stalkie_big_nohaplotig	exon	144736628	144737019	98	-	.	Parent=FBgn0016034.2.mrna1;Target=FBgn0016034.2 380 771 +
Chr2	stalkie_big_nohaplotig	exon	144737120	144737269	100	-	.	Parent=FBgn0016034.2.mrna1;Target=FBgn0016034.2 230 379 +
Chr2	stalkie_big_nohaplotig	exon	144737340	144737568	98	-	.	Parent=FBgn0016034.2.mrna1;Target=FBgn0016034.2 1 229 +
Chr2	stalkie_big_nohaplotig	CDS	144736267	144736491	.	-	0	Parent=FBgn0016034.2.mrna1;Target=FBgn0016034.2 772 996 +
Chr2	stalkie_big_nohaplotig	CDS	144736628	144737019	.	-	2	Parent=FBgn0016034.2.mrna1;Target=FBgn0016034.2 380 771 +
Chr2	stalkie_big_nohaplotig	CDS	144737120	144737269	.	-	2	Parent=FBgn0016034.2.mrna1;Target=FBgn0016034.2 230 379 +
Chr2	stalkie_big_nohaplotig	CDS	144737340	144737568	.	-	0	Parent=FBgn0016034.2.mrna1;Target=FBgn0016034.2 1 229 +
Chr2	gffcl	locus	144741051	144741736	.	-	.	ID=RLOC_00022400;geneIDs=comp140786_c0_seq1.path1;transcripts=comp140786_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144741051	144741736	.	-	.	ID=comp140786_c0_seq1.mrna1;geneID=comp140786_c0_seq1.path1;Name=comp140786_c0_seq1;Dir=indeterminatecoverage=98.0;identity=98.8;matches=678;mismatches=8;indels=0;unknowns=0;Target=comp140786_c0_seq1 700 15 .;CDS_Target=comp140786_c0_seq1 698 597 .;locus=RLOC_00022400
Chr2	stalkie_big_nohaplotig	exon	144741051	144741736	98	-	.	Parent=comp140786_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	144741053	144741154	.	-	0	Parent=comp140786_c0_seq1.mrna1
Chr2	gffcl	locus	144749214	144750850	.	+	.	ID=RLOC_00022401;geneIDs=ORF585.path5;transcripts=ORF585.mrna5
Chr2	stalkie_big_nohaplotig	mRNA	144749214	144750850	.	+	.	ID=ORF585.mrna5;geneID=ORF585.path5;Name=ORF585;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1627;mismatches=10;indels=1;unknowns=0;Target=ORF585 1638 1 .;locus=RLOC_00022401
Chr2	stalkie_big_nohaplotig	exon	144749214	144750850	99	+	.	Parent=ORF585.mrna5
Chr2	stalkie_big_nohaplotig	CDS	144749214	144750850	.	+	0	Parent=ORF585.mrna5
Chr2	gffcl	locus	144794360	144795249	.	+	.	ID=RLOC_00022402;geneIDs=comp115159_c0_seq1.path1;transcripts=comp115159_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144794360	144795249	.	+	.	ID=comp115159_c0_seq1.mrna1;geneID=comp115159_c0_seq1.path1;Name=comp115159_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=883;mismatches=3;indels=4;unknowns=0;Target=comp115159_c0_seq1 886 1 .;CDS_Target=comp115159_c0_seq1 305 249 .;locus=RLOC_00022402
Chr2	stalkie_big_nohaplotig	exon	144794360	144795249	99	+	.	Parent=comp115159_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	144794612	144794668	.	+	0	Parent=comp115159_c0_seq1.mrna1
Chr2	gffcl	locus	144904661	144905321	.	-	.	ID=RLOC_00022404;geneIDs=comp145923_c0_seq1.path1;transcripts=comp145923_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144904661	144905321	.	-	.	ID=comp145923_c0_seq1.mrna1;geneID=comp145923_c0_seq1.path1;Name=comp145923_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=607;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022404
Chr2	stalkie_big_nohaplotig	exon	144904661	144905020	99	-	.	Parent=comp145923_c0_seq1.mrna1;Target=comp145923_c0_seq1 249 608 +
Chr2	stalkie_big_nohaplotig	exon	144905074	144905321	100	-	.	Parent=comp145923_c0_seq1.mrna1;Target=comp145923_c0_seq1 1 248 +
Chr2	stalkie_big_nohaplotig	CDS	144904719	144905020	.	-	2	Parent=comp145923_c0_seq1.mrna1;Target=comp145923_c0_seq1 249 550 +
Chr2	stalkie_big_nohaplotig	CDS	144905074	144905263	.	-	0	Parent=comp145923_c0_seq1.mrna1;Target=comp145923_c0_seq1 59 248 +
Chr2	gffcl	locus	144913205	144917905	.	+	.	ID=RLOC_00022405;geneIDs=FBgn0039719.1.path1;transcripts=FBgn0039719.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144913205	144917905	.	+	.	ID=FBgn0039719.1.mrna1;geneID=FBgn0039719.1.path1;Name=FBgn0039719.1;Dir=sensecoverage=100.0;identity=97.1;matches=367;mismatches=11;indels=0;unknowns=0;locus=RLOC_00022405
Chr2	stalkie_big_nohaplotig	exon	144913205	144913231	100	+	.	Parent=FBgn0039719.1.mrna1;Target=FBgn0039719.1 1 27 +
Chr2	stalkie_big_nohaplotig	exon	144917477	144917604	98	+	.	Parent=FBgn0039719.1.mrna1;Target=FBgn0039719.1 28 155 +
Chr2	stalkie_big_nohaplotig	exon	144917683	144917905	95	+	.	Parent=FBgn0039719.1.mrna1;Target=FBgn0039719.1 156 378 +
Chr2	stalkie_big_nohaplotig	CDS	144913205	144913231	.	+	0	Parent=FBgn0039719.1.mrna1;Target=FBgn0039719.1 1 27 +
Chr2	stalkie_big_nohaplotig	CDS	144917477	144917604	.	+	0	Parent=FBgn0039719.1.mrna1;Target=FBgn0039719.1 28 155 +
Chr2	stalkie_big_nohaplotig	CDS	144917683	144917905	.	+	1	Parent=FBgn0039719.1.mrna1;Target=FBgn0039719.1 156 378 +
Chr2	gffcl	locus	144944422	144947180	.	+	.	ID=RLOC_00022406;geneIDs=FBgn0262127.1.path1;transcripts=FBgn0262127.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144944422	144947180	.	+	.	ID=FBgn0262127.1.mrna1;geneID=FBgn0262127.1.path1;Name=FBgn0262127.1;Dir=sensecoverage=90.6;identity=99.8;matches=2465;mismatches=5;indels=0;unknowns=0;locus=RLOC_00022406
Chr2	stalkie_big_nohaplotig	exon	144944422	144944723	99	+	.	Parent=FBgn0262127.1.mrna1;Target=FBgn0262127.1 258 559 +
Chr2	stalkie_big_nohaplotig	exon	144944782	144946414	99	+	.	Parent=FBgn0262127.1.mrna1;Target=FBgn0262127.1 560 2192 +
Chr2	stalkie_big_nohaplotig	exon	144946575	144946755	100	+	.	Parent=FBgn0262127.1.mrna1;Target=FBgn0262127.1 2193 2373 +
Chr2	stalkie_big_nohaplotig	exon	144946827	144947180	100	+	.	Parent=FBgn0262127.1.mrna1;Target=FBgn0262127.1 2374 2727 +
Chr2	stalkie_big_nohaplotig	CDS	144944423	144944723	.	+	0	Parent=FBgn0262127.1.mrna1;Target=FBgn0262127.1 259 559 +
Chr2	stalkie_big_nohaplotig	CDS	144944782	144946414	.	+	2	Parent=FBgn0262127.1.mrna1;Target=FBgn0262127.1 560 2192 +
Chr2	stalkie_big_nohaplotig	CDS	144946575	144946755	.	+	1	Parent=FBgn0262127.1.mrna1;Target=FBgn0262127.1 2193 2373 +
Chr2	stalkie_big_nohaplotig	CDS	144946827	144947180	.	+	0	Parent=FBgn0262127.1.mrna1;Target=FBgn0262127.1 2374 2727 +
Chr2	gffcl	locus	144978662	144979034	.	+	.	ID=RLOC_00022407;geneIDs=comp137816_c0_seq1.path1;transcripts=comp137816_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144978662	144979034	.	+	.	ID=comp137816_c0_seq1.mrna1;geneID=comp137816_c0_seq1.path1;Name=comp137816_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.9;matches=371;mismatches=1;indels=3;unknowns=0;Target=comp137816_c0_seq1 374 1 .;CDS_Target=comp137816_c0_seq1 102 1 .;locus=RLOC_00022407
Chr2	stalkie_big_nohaplotig	exon	144978662	144979034	98	+	.	Parent=comp137816_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	144978662	144978763	.	+	0	Parent=comp137816_c0_seq1.mrna1
Chr2	gffcl	locus	144979465	144987666	.	-	.	ID=RLOC_00022408;geneIDs=FBgn0039722.1.path1;transcripts=FBgn0039722.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144979465	144987666	.	-	.	ID=FBgn0039722.1.mrna1;geneID=FBgn0039722.1.path1;Name=FBgn0039722.1;Dir=sensecoverage=100.0;identity=99.3;matches=456;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022408
Chr2	stalkie_big_nohaplotig	exon	144979465	144979688	98	-	.	Parent=FBgn0039722.1.mrna1;Target=FBgn0039722.1 236 459 +
Chr2	stalkie_big_nohaplotig	exon	144979787	144979936	100	-	.	Parent=FBgn0039722.1.mrna1;Target=FBgn0039722.1 86 235 +
Chr2	stalkie_big_nohaplotig	exon	144987582	144987666	100	-	.	Parent=FBgn0039722.1.mrna1;Target=FBgn0039722.1 1 85 +
Chr2	stalkie_big_nohaplotig	CDS	144979465	144979688	.	-	2	Parent=FBgn0039722.1.mrna1;Target=FBgn0039722.1 236 459 +
Chr2	stalkie_big_nohaplotig	CDS	144979787	144979936	.	-	2	Parent=FBgn0039722.1.mrna1;Target=FBgn0039722.1 86 235 +
Chr2	stalkie_big_nohaplotig	CDS	144987582	144987666	.	-	0	Parent=FBgn0039722.1.mrna1;Target=FBgn0039722.1 1 85 +
Chr2	gffcl	locus	144989773	144990290	.	+	.	ID=RLOC_00022409;geneIDs=comp147752_c0_seq1.path1;transcripts=comp147752_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	144989773	144990290	.	+	.	ID=comp147752_c0_seq1.mrna1;geneID=comp147752_c0_seq1.path1;Name=comp147752_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=501;mismatches=17;indels=0;unknowns=0;Target=comp147752_c0_seq1 518 1 .;CDS_Target=comp147752_c0_seq1 64 2 .;locus=RLOC_00022409
Chr2	stalkie_big_nohaplotig	exon	144989773	144990290	96	+	.	Parent=comp147752_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	144989774	144989836	.	+	0	Parent=comp147752_c0_seq1.mrna1
Chr2	gffcl	locus	144992710	144992757	.	-	.	ID=RLOC_00022411;geneIDs=comp115886_c0_seq1.path2;transcripts=comp115886_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	144992710	144992757	.	-	.	ID=comp115886_c0_seq1.mrna2;geneID=comp115886_c0_seq1.path2;Name=comp115886_c0_seq1;Dir=indeterminatecoverage=17.5;identity=95.8;matches=46;mismatches=2;indels=0;unknowns=0;Target=comp115886_c0_seq1 275 228 .;locus=RLOC_00022411
Chr2	stalkie_big_nohaplotig	exon	144992710	144992757	95	-	.	Parent=comp115886_c0_seq1.mrna2
Chr2	gffcl	locus	145026662	145028685	.	+	.	ID=RLOC_00022412;geneIDs=FBgn0039723.1.path1;transcripts=FBgn0039723.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145026662	145028685	.	+	.	ID=FBgn0039723.1.mrna1;geneID=FBgn0039723.1.path1;Name=FBgn0039723.1;Dir=sensecoverage=100.0;identity=99.5;matches=570;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022412
Chr2	stalkie_big_nohaplotig	exon	145026662	145026845	100	+	.	Parent=FBgn0039723.1.mrna1;Target=FBgn0039723.1 1 184 +
Chr2	stalkie_big_nohaplotig	exon	145028297	145028685	99	+	.	Parent=FBgn0039723.1.mrna1;Target=FBgn0039723.1 185 573 +
Chr2	stalkie_big_nohaplotig	CDS	145026662	145026845	.	+	0	Parent=FBgn0039723.1.mrna1;Target=FBgn0039723.1 1 184 +
Chr2	stalkie_big_nohaplotig	CDS	145028297	145028685	.	+	2	Parent=FBgn0039723.1.mrna1;Target=FBgn0039723.1 185 573 +
Chr2	gffcl	locus	145095813	145096649	.	-	.	ID=RLOC_00022413;geneIDs=comp156434_c0_seq1.path1;transcripts=comp156434_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145095813	145096649	.	-	.	ID=comp156434_c0_seq1.mrna1;geneID=comp156434_c0_seq1.path1;Name=comp156434_c0_seq1;Dir=sensecoverage=99.7;identity=99.3;matches=695;mismatches=4;indels=1;unknowns=0;locus=RLOC_00022413
Chr2	stalkie_big_nohaplotig	exon	145095813	145095964	99	-	.	Parent=comp156434_c0_seq1.mrna1;Target=comp156434_c0_seq1 549 700 +
Chr2	stalkie_big_nohaplotig	exon	145096038	145096191	99	-	.	Parent=comp156434_c0_seq1.mrna1;Target=comp156434_c0_seq1 395 548 +
Chr2	stalkie_big_nohaplotig	exon	145096257	145096649	99	-	.	Parent=comp156434_c0_seq1.mrna1;Target=comp156434_c0_seq1 1 394 +
Chr2	stalkie_big_nohaplotig	CDS	145096059	145096191	.	-	1	Parent=comp156434_c0_seq1.mrna1;Target=comp156434_c0_seq1 395 527 +
Chr2	stalkie_big_nohaplotig	CDS	145096257	145096567	.	-	0	Parent=comp156434_c0_seq1.mrna1;Target=comp156434_c0_seq1 84 394 +
Chr2	gffcl	locus	145133978	145134181	.	+	.	ID=RLOC_00022415;geneIDs=comp157852_c0_seq1.path1;transcripts=comp157852_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145133978	145134181	.	+	.	ID=comp157852_c0_seq1.mrna1;geneID=comp157852_c0_seq1.path1;Name=comp157852_c0_seq1;Dir=indeterminatecoverage=99.5;identity=95.6;matches=195;mismatches=9;indels=0;unknowns=0;Target=comp157852_c0_seq1 205 2 .;CDS_Target=comp157852_c0_seq1 204 136 .;locus=RLOC_00022415
Chr2	stalkie_big_nohaplotig	exon	145133978	145134181	95	+	.	Parent=comp157852_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	145134112	145134180	.	+	0	Parent=comp157852_c0_seq1.mrna1
Chr2	gffcl	locus	145134547	145135791	.	-	.	ID=RLOC_00022416;geneIDs=FBgn0037569.1.path1;transcripts=FBgn0037569.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145134547	145135791	.	-	.	ID=FBgn0037569.1.mrna1;geneID=FBgn0037569.1.path1;Name=FBgn0037569.1;Dir=sensecoverage=100.0;identity=99.2;matches=976;mismatches=8;indels=0;unknowns=0;locus=RLOC_00022416
Chr2	stalkie_big_nohaplotig	exon	145134547	145134884	99	-	.	Parent=FBgn0037569.1.mrna1;Target=FBgn0037569.1 647 984 +
Chr2	stalkie_big_nohaplotig	exon	145134946	145135099	99	-	.	Parent=FBgn0037569.1.mrna1;Target=FBgn0037569.1 493 646 +
Chr2	stalkie_big_nohaplotig	exon	145135154	145135438	98	-	.	Parent=FBgn0037569.1.mrna1;Target=FBgn0037569.1 208 492 +
Chr2	stalkie_big_nohaplotig	exon	145135502	145135597	100	-	.	Parent=FBgn0037569.1.mrna1;Target=FBgn0037569.1 112 207 +
Chr2	stalkie_big_nohaplotig	exon	145135681	145135791	99	-	.	Parent=FBgn0037569.1.mrna1;Target=FBgn0037569.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	145134547	145134884	.	-	2	Parent=FBgn0037569.1.mrna1;Target=FBgn0037569.1 647 984 +
Chr2	stalkie_big_nohaplotig	CDS	145134946	145135099	.	-	0	Parent=FBgn0037569.1.mrna1;Target=FBgn0037569.1 493 646 +
Chr2	stalkie_big_nohaplotig	CDS	145135154	145135438	.	-	0	Parent=FBgn0037569.1.mrna1;Target=FBgn0037569.1 208 492 +
Chr2	stalkie_big_nohaplotig	CDS	145135502	145135597	.	-	0	Parent=FBgn0037569.1.mrna1;Target=FBgn0037569.1 112 207 +
Chr2	stalkie_big_nohaplotig	CDS	145135681	145135791	.	-	0	Parent=FBgn0037569.1.mrna1;Target=FBgn0037569.1 1 111 +
Chr2	gffcl	locus	145138100	145138835	.	-	.	ID=RLOC_00022417;geneIDs=FBgn0037383.1.path1;transcripts=FBgn0037383.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145138100	145138835	.	-	.	ID=FBgn0037383.1.mrna1;geneID=FBgn0037383.1.path1;Name=FBgn0037383.1;Dir=sensecoverage=100.0;identity=99.7;matches=682;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022417
Chr2	stalkie_big_nohaplotig	exon	145138100	145138699	99	-	.	Parent=FBgn0037383.1.mrna1;Target=FBgn0037383.1 85 684 +
Chr2	stalkie_big_nohaplotig	exon	145138752	145138835	100	-	.	Parent=FBgn0037383.1.mrna1;Target=FBgn0037383.1 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	145138100	145138699	.	-	0	Parent=FBgn0037383.1.mrna1;Target=FBgn0037383.1 85 684 +
Chr2	stalkie_big_nohaplotig	CDS	145138752	145138835	.	-	0	Parent=FBgn0037383.1.mrna1;Target=FBgn0037383.1 1 84 +
Chr2	gffcl	locus	145155242	145169769	.	-	.	ID=RLOC_00022418;geneIDs=FBgn0001314.1.path1;transcripts=FBgn0001314.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145155242	145169769	.	-	.	ID=FBgn0001314.1.mrna1;geneID=FBgn0001314.1.path1;Name=FBgn0001314.1;Dir=sensecoverage=100.0;identity=99.7;matches=10412;mismatches=33;indels=1;unknowns=0;locus=RLOC_00022418
Chr2	stalkie_big_nohaplotig	exon	145155242	145155511	98	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 10176 10446 +
Chr2	stalkie_big_nohaplotig	exon	145155568	145155836	98	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 9907 10175 +
Chr2	stalkie_big_nohaplotig	exon	145155917	145156543	99	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 9280 9906 +
Chr2	stalkie_big_nohaplotig	exon	145156628	145156761	99	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 9146 9279 +
Chr2	stalkie_big_nohaplotig	exon	145156823	145157112	99	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 8856 9145 +
Chr2	stalkie_big_nohaplotig	exon	145157185	145157325	100	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 8715 8855 +
Chr2	stalkie_big_nohaplotig	exon	145157389	145158007	99	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 8096 8714 +
Chr2	stalkie_big_nohaplotig	exon	145158505	145158691	100	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 7909 8095 +
Chr2	stalkie_big_nohaplotig	exon	145158748	145159082	100	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 7574 7908 +
Chr2	stalkie_big_nohaplotig	exon	145159148	145159453	99	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 7268 7573 +
Chr2	stalkie_big_nohaplotig	exon	145159524	145159872	99	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 6919 7267 +
Chr2	stalkie_big_nohaplotig	exon	145160117	145160849	99	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 6186 6918 +
Chr2	stalkie_big_nohaplotig	exon	145160911	145161369	100	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 5727 6185 +
Chr2	stalkie_big_nohaplotig	exon	145162333	145162769	99	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 5290 5726 +
Chr2	stalkie_big_nohaplotig	exon	145162832	145162971	100	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 5150 5289 +
Chr2	stalkie_big_nohaplotig	exon	145163036	145163793	99	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 4392 5149 +
Chr2	stalkie_big_nohaplotig	exon	145163853	145164271	99	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 3973 4391 +
Chr2	stalkie_big_nohaplotig	exon	145164376	145164505	100	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 3843 3972 +
Chr2	stalkie_big_nohaplotig	exon	145164569	145164776	100	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 3635 3842 +
Chr2	stalkie_big_nohaplotig	exon	145164848	145165031	99	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 3451 3634 +
Chr2	stalkie_big_nohaplotig	exon	145165119	145165243	98	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 3326 3450 +
Chr2	stalkie_big_nohaplotig	exon	145165302	145165513	99	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 3114 3325 +
Chr2	stalkie_big_nohaplotig	exon	145165596	145166001	99	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 2708 3113 +
Chr2	stalkie_big_nohaplotig	exon	145166606	145166774	100	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 2539 2707 +
Chr2	stalkie_big_nohaplotig	exon	145166841	145167076	100	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 2303 2538 +
Chr2	stalkie_big_nohaplotig	exon	145167141	145167511	99	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 1932 2302 +
Chr2	stalkie_big_nohaplotig	exon	145167590	145167960	100	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 1561 1931 +
Chr2	stalkie_big_nohaplotig	exon	145168060	145168423	100	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 1197 1560 +
Chr2	stalkie_big_nohaplotig	exon	145168511	145168614	100	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 1093 1196 +
Chr2	stalkie_big_nohaplotig	exon	145168678	145169769	100	-	.	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 1 1092 +
Chr2	stalkie_big_nohaplotig	CDS	145155242	145155511	.	-	1	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 10176 10446 +
Chr2	stalkie_big_nohaplotig	CDS	145155568	145155836	.	-	0	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 9907 10175 +
Chr2	stalkie_big_nohaplotig	CDS	145155917	145156543	.	-	0	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 9280 9906 +
Chr2	stalkie_big_nohaplotig	CDS	145156628	145156761	.	-	2	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 9146 9279 +
Chr2	stalkie_big_nohaplotig	CDS	145156823	145157112	.	-	1	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 8856 9145 +
Chr2	stalkie_big_nohaplotig	CDS	145157185	145157325	.	-	1	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 8715 8855 +
Chr2	stalkie_big_nohaplotig	CDS	145157389	145158007	.	-	2	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 8096 8714 +
Chr2	stalkie_big_nohaplotig	CDS	145158505	145158691	.	-	0	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 7909 8095 +
Chr2	stalkie_big_nohaplotig	CDS	145158748	145159082	.	-	2	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 7574 7908 +
Chr2	stalkie_big_nohaplotig	CDS	145159148	145159453	.	-	2	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 7268 7573 +
Chr2	stalkie_big_nohaplotig	CDS	145159524	145159872	.	-	0	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 6919 7267 +
Chr2	stalkie_big_nohaplotig	CDS	145160117	145160849	.	-	1	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 6186 6918 +
Chr2	stalkie_big_nohaplotig	CDS	145160911	145161369	.	-	1	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 5727 6185 +
Chr2	stalkie_big_nohaplotig	CDS	145162333	145162769	.	-	0	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 5290 5726 +
Chr2	stalkie_big_nohaplotig	CDS	145162832	145162971	.	-	2	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 5150 5289 +
Chr2	stalkie_big_nohaplotig	CDS	145163036	145163793	.	-	1	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 4392 5149 +
Chr2	stalkie_big_nohaplotig	CDS	145163853	145164271	.	-	0	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 3973 4391 +
Chr2	stalkie_big_nohaplotig	CDS	145164376	145164505	.	-	1	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 3843 3972 +
Chr2	stalkie_big_nohaplotig	CDS	145164569	145164776	.	-	2	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 3635 3842 +
Chr2	stalkie_big_nohaplotig	CDS	145164848	145165031	.	-	0	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 3451 3634 +
Chr2	stalkie_big_nohaplotig	CDS	145165119	145165243	.	-	2	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 3326 3450 +
Chr2	stalkie_big_nohaplotig	CDS	145165302	145165513	.	-	1	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 3114 3325 +
Chr2	stalkie_big_nohaplotig	CDS	145165596	145166001	.	-	2	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 2708 3113 +
Chr2	stalkie_big_nohaplotig	CDS	145166606	145166774	.	-	0	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 2539 2707 +
Chr2	stalkie_big_nohaplotig	CDS	145166841	145167076	.	-	2	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 2303 2538 +
Chr2	stalkie_big_nohaplotig	CDS	145167141	145167511	.	-	1	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 1932 2302 +
Chr2	stalkie_big_nohaplotig	CDS	145167590	145167960	.	-	0	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 1561 1931 +
Chr2	stalkie_big_nohaplotig	CDS	145168060	145168423	.	-	1	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 1197 1560 +
Chr2	stalkie_big_nohaplotig	CDS	145168511	145168614	.	-	0	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 1093 1196 +
Chr2	stalkie_big_nohaplotig	CDS	145168678	145169769	.	-	0	Parent=FBgn0001314.1.mrna1;Target=FBgn0001314.1 1 1092 +
Chr2	gffcl	locus	145171768	145174371	.	+	.	ID=RLOC_00022419;geneIDs=FBgn0038321.1.path1;transcripts=FBgn0038321.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145171768	145174371	.	+	.	ID=FBgn0038321.1.mrna1;geneID=FBgn0038321.1.path1;Name=FBgn0038321.1;Dir=sensecoverage=94.9;identity=99.4;matches=1045;mismatches=6;indels=0;unknowns=0;locus=RLOC_00022419
Chr2	stalkie_big_nohaplotig	exon	145171768	145171978	99	+	.	Parent=FBgn0038321.1.mrna1;Target=FBgn0038321.1 57 267 +
Chr2	stalkie_big_nohaplotig	exon	145172210	145172435	98	+	.	Parent=FBgn0038321.1.mrna1;Target=FBgn0038321.1 268 493 +
Chr2	stalkie_big_nohaplotig	exon	145173758	145174371	99	+	.	Parent=FBgn0038321.1.mrna1;Target=FBgn0038321.1 494 1107 +
Chr2	stalkie_big_nohaplotig	CDS	145171769	145171978	.	+	0	Parent=FBgn0038321.1.mrna1;Target=FBgn0038321.1 58 267 +
Chr2	stalkie_big_nohaplotig	CDS	145172210	145172435	.	+	0	Parent=FBgn0038321.1.mrna1;Target=FBgn0038321.1 268 493 +
Chr2	stalkie_big_nohaplotig	CDS	145173758	145174371	.	+	2	Parent=FBgn0038321.1.mrna1;Target=FBgn0038321.1 494 1107 +
Chr2	gffcl	locus	145182197	145182481	.	-	.	ID=RLOC_00022420;geneIDs=comp162405_c2_seq1.path2;transcripts=comp162405_c2_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	145182197	145182481	.	-	.	ID=comp162405_c2_seq1.mrna2;geneID=comp162405_c2_seq1.path2;Name=comp162405_c2_seq1;Dir=indeterminatecoverage=7.6;identity=100.0;matches=285;mismatches=0;indels=0;unknowns=0;Target=comp162405_c2_seq1 3771 3487 .;locus=RLOC_00022420
Chr2	stalkie_big_nohaplotig	exon	145182197	145182481	100	-	.	Parent=comp162405_c2_seq1.mrna2
Chr2	gffcl	locus	145182725	145197910	.	-	.	ID=RLOC_00022421;geneIDs=FBgn0039056.1.path1;transcripts=FBgn0039056.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145182725	145197910	.	-	.	ID=FBgn0039056.1.mrna1;geneID=FBgn0039056.1.path1;Name=FBgn0039056.1;Dir=sensecoverage=100.0;identity=100.0;matches=2430;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022421
Chr2	stalkie_big_nohaplotig	exon	145182725	145182908	100	-	.	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 2247 2430 +
Chr2	stalkie_big_nohaplotig	exon	145182979	145183199	100	-	.	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 2026 2246 +
Chr2	stalkie_big_nohaplotig	exon	145183279	145183688	100	-	.	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 1616 2025 +
Chr2	stalkie_big_nohaplotig	exon	145183743	145184167	100	-	.	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 1191 1615 +
Chr2	stalkie_big_nohaplotig	exon	145184232	145184384	100	-	.	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 1038 1190 +
Chr2	stalkie_big_nohaplotig	exon	145184455	145184571	100	-	.	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 921 1037 +
Chr2	stalkie_big_nohaplotig	exon	145185048	145185343	100	-	.	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 625 920 +
Chr2	stalkie_big_nohaplotig	exon	145188347	145188490	100	-	.	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 481 624 +
Chr2	stalkie_big_nohaplotig	exon	145188558	145188722	100	-	.	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 316 480 +
Chr2	stalkie_big_nohaplotig	exon	145188802	145188895	100	-	.	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 222 315 +
Chr2	stalkie_big_nohaplotig	exon	145189094	145189210	100	-	.	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 105 221 +
Chr2	stalkie_big_nohaplotig	exon	145197807	145197910	100	-	.	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 1 104 +
Chr2	stalkie_big_nohaplotig	CDS	145182725	145182908	.	-	1	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 2247 2430 +
Chr2	stalkie_big_nohaplotig	CDS	145182979	145183199	.	-	0	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 2026 2246 +
Chr2	stalkie_big_nohaplotig	CDS	145183279	145183688	.	-	2	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 1616 2025 +
Chr2	stalkie_big_nohaplotig	CDS	145183743	145184167	.	-	1	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 1191 1615 +
Chr2	stalkie_big_nohaplotig	CDS	145184232	145184384	.	-	1	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 1038 1190 +
Chr2	stalkie_big_nohaplotig	CDS	145184455	145184571	.	-	1	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 921 1037 +
Chr2	stalkie_big_nohaplotig	CDS	145185048	145185343	.	-	0	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 625 920 +
Chr2	stalkie_big_nohaplotig	CDS	145188347	145188490	.	-	0	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 481 624 +
Chr2	stalkie_big_nohaplotig	CDS	145188558	145188722	.	-	0	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 316 480 +
Chr2	stalkie_big_nohaplotig	CDS	145188802	145188895	.	-	1	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 222 315 +
Chr2	stalkie_big_nohaplotig	CDS	145189094	145189210	.	-	1	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 105 221 +
Chr2	stalkie_big_nohaplotig	CDS	145197807	145197910	.	-	0	Parent=FBgn0039056.1.mrna1;Target=FBgn0039056.1 1 104 +
Chr2	gffcl	locus	145201085	145205038	.	+	.	ID=RLOC_00022422;geneIDs=FBgn0039055.1.path1;transcripts=FBgn0039055.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145201085	145205038	.	+	.	ID=FBgn0039055.1.mrna1;geneID=FBgn0039055.1.path1;Name=FBgn0039055.1;Dir=sensecoverage=100.0;identity=99.9;matches=2512;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022422
Chr2	stalkie_big_nohaplotig	exon	145201085	145201127	100	+	.	Parent=FBgn0039055.1.mrna1;Target=FBgn0039055.1 1 43 +
Chr2	stalkie_big_nohaplotig	exon	145201194	145201288	100	+	.	Parent=FBgn0039055.1.mrna1;Target=FBgn0039055.1 44 138 +
Chr2	stalkie_big_nohaplotig	exon	145201352	145201531	100	+	.	Parent=FBgn0039055.1.mrna1;Target=FBgn0039055.1 139 318 +
Chr2	stalkie_big_nohaplotig	exon	145202530	145202724	100	+	.	Parent=FBgn0039055.1.mrna1;Target=FBgn0039055.1 319 513 +
Chr2	stalkie_big_nohaplotig	exon	145202786	145203166	100	+	.	Parent=FBgn0039055.1.mrna1;Target=FBgn0039055.1 514 894 +
Chr2	stalkie_big_nohaplotig	exon	145203234	145204363	99	+	.	Parent=FBgn0039055.1.mrna1;Target=FBgn0039055.1 895 2024 +
Chr2	stalkie_big_nohaplotig	exon	145204430	145204756	100	+	.	Parent=FBgn0039055.1.mrna1;Target=FBgn0039055.1 2025 2351 +
Chr2	stalkie_big_nohaplotig	exon	145204816	145204920	100	+	.	Parent=FBgn0039055.1.mrna1;Target=FBgn0039055.1 2352 2456 +
Chr2	stalkie_big_nohaplotig	exon	145204981	145205038	100	+	.	Parent=FBgn0039055.1.mrna1;Target=FBgn0039055.1 2457 2514 +
Chr2	stalkie_big_nohaplotig	CDS	145201085	145201127	.	+	0	Parent=FBgn0039055.1.mrna1;Target=FBgn0039055.1 1 43 +
Chr2	stalkie_big_nohaplotig	CDS	145201194	145201288	.	+	2	Parent=FBgn0039055.1.mrna1;Target=FBgn0039055.1 44 138 +
Chr2	stalkie_big_nohaplotig	CDS	145201352	145201531	.	+	0	Parent=FBgn0039055.1.mrna1;Target=FBgn0039055.1 139 318 +
Chr2	stalkie_big_nohaplotig	CDS	145202530	145202724	.	+	0	Parent=FBgn0039055.1.mrna1;Target=FBgn0039055.1 319 513 +
Chr2	stalkie_big_nohaplotig	CDS	145202786	145203166	.	+	0	Parent=FBgn0039055.1.mrna1;Target=FBgn0039055.1 514 894 +
Chr2	stalkie_big_nohaplotig	CDS	145203234	145204363	.	+	0	Parent=FBgn0039055.1.mrna1;Target=FBgn0039055.1 895 2024 +
Chr2	stalkie_big_nohaplotig	CDS	145204430	145204756	.	+	1	Parent=FBgn0039055.1.mrna1;Target=FBgn0039055.1 2025 2351 +
Chr2	stalkie_big_nohaplotig	CDS	145204816	145204920	.	+	1	Parent=FBgn0039055.1.mrna1;Target=FBgn0039055.1 2352 2456 +
Chr2	stalkie_big_nohaplotig	CDS	145204981	145205038	.	+	1	Parent=FBgn0039055.1.mrna1;Target=FBgn0039055.1 2457 2514 +
Chr2	gffcl	locus	145282280	145345624	.	+	.	ID=RLOC_00022424;geneIDs=FBgn0261988.1.path1;transcripts=FBgn0261988.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145282280	145345624	.	+	.	ID=FBgn0261988.1.mrna1;geneID=FBgn0261988.1.path1;Name=FBgn0261988.1;Dir=sensecoverage=100.0;identity=99.8;matches=2138;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022424
Chr2	stalkie_big_nohaplotig	exon	145282280	145282352	100	+	.	Parent=FBgn0261988.1.mrna1;Target=FBgn0261988.1 1 73 +
Chr2	stalkie_big_nohaplotig	exon	145339718	145339813	100	+	.	Parent=FBgn0261988.1.mrna1;Target=FBgn0261988.1 74 169 +
Chr2	stalkie_big_nohaplotig	exon	145339891	145340011	100	+	.	Parent=FBgn0261988.1.mrna1;Target=FBgn0261988.1 170 290 +
Chr2	stalkie_big_nohaplotig	exon	145340099	145340689	99	+	.	Parent=FBgn0261988.1.mrna1;Target=FBgn0261988.1 291 881 +
Chr2	stalkie_big_nohaplotig	exon	145343179	145343284	100	+	.	Parent=FBgn0261988.1.mrna1;Target=FBgn0261988.1 882 987 +
Chr2	stalkie_big_nohaplotig	exon	145343375	145343564	100	+	.	Parent=FBgn0261988.1.mrna1;Target=FBgn0261988.1 988 1177 +
Chr2	stalkie_big_nohaplotig	exon	145344073	145344321	100	+	.	Parent=FBgn0261988.1.mrna1;Target=FBgn0261988.1 1178 1426 +
Chr2	stalkie_big_nohaplotig	exon	145344394	145344551	99	+	.	Parent=FBgn0261988.1.mrna1;Target=FBgn0261988.1 1427 1584 +
Chr2	stalkie_big_nohaplotig	exon	145344624	145344827	100	+	.	Parent=FBgn0261988.1.mrna1;Target=FBgn0261988.1 1585 1788 +
Chr2	stalkie_big_nohaplotig	exon	145345201	145345464	99	+	.	Parent=FBgn0261988.1.mrna1;Target=FBgn0261988.1 1789 2052 +
Chr2	stalkie_big_nohaplotig	exon	145345535	145345624	100	+	.	Parent=FBgn0261988.1.mrna1;Target=FBgn0261988.1 2053 2142 +
Chr2	stalkie_big_nohaplotig	CDS	145282280	145282352	.	+	0	Parent=FBgn0261988.1.mrna1;Target=FBgn0261988.1 1 73 +
Chr2	stalkie_big_nohaplotig	CDS	145339718	145339813	.	+	2	Parent=FBgn0261988.1.mrna1;Target=FBgn0261988.1 74 169 +
Chr2	stalkie_big_nohaplotig	CDS	145339891	145340011	.	+	2	Parent=FBgn0261988.1.mrna1;Target=FBgn0261988.1 170 290 +
Chr2	stalkie_big_nohaplotig	CDS	145340099	145340689	.	+	1	Parent=FBgn0261988.1.mrna1;Target=FBgn0261988.1 291 881 +
Chr2	stalkie_big_nohaplotig	CDS	145343179	145343284	.	+	1	Parent=FBgn0261988.1.mrna1;Target=FBgn0261988.1 882 987 +
Chr2	stalkie_big_nohaplotig	CDS	145343375	145343564	.	+	0	Parent=FBgn0261988.1.mrna1;Target=FBgn0261988.1 988 1177 +
Chr2	stalkie_big_nohaplotig	CDS	145344073	145344321	.	+	2	Parent=FBgn0261988.1.mrna1;Target=FBgn0261988.1 1178 1426 +
Chr2	stalkie_big_nohaplotig	CDS	145344394	145344551	.	+	2	Parent=FBgn0261988.1.mrna1;Target=FBgn0261988.1 1427 1584 +
Chr2	stalkie_big_nohaplotig	CDS	145344624	145344827	.	+	0	Parent=FBgn0261988.1.mrna1;Target=FBgn0261988.1 1585 1788 +
Chr2	stalkie_big_nohaplotig	CDS	145345201	145345464	.	+	0	Parent=FBgn0261988.1.mrna1;Target=FBgn0261988.1 1789 2052 +
Chr2	stalkie_big_nohaplotig	CDS	145345535	145345624	.	+	0	Parent=FBgn0261988.1.mrna1;Target=FBgn0261988.1 2053 2142 +
Chr2	gffcl	locus	145326870	145328682	.	-	.	ID=RLOC_00022425;geneIDs=ORF2753.path1;transcripts=ORF2753.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145326870	145328682	.	-	.	ID=ORF2753.mrna1;geneID=ORF2753.path1;Name=ORF2753;Dir=sensecoverage=100.0;identity=99.3;matches=804;mismatches=5;indels=1;unknowns=0;locus=RLOC_00022425
Chr2	stalkie_big_nohaplotig	exon	145326870	145327184	99	-	.	Parent=ORF2753.mrna1;Target=ORF2753 496 810 +
Chr2	stalkie_big_nohaplotig	exon	145327250	145327317	100	-	.	Parent=ORF2753.mrna1;Target=ORF2753 428 495 +
Chr2	stalkie_big_nohaplotig	exon	145328145	145328271	100	-	.	Parent=ORF2753.mrna1;Target=ORF2753 301 427 +
Chr2	stalkie_big_nohaplotig	exon	145328328	145328404	100	-	.	Parent=ORF2753.mrna1;Target=ORF2753 224 300 +
Chr2	stalkie_big_nohaplotig	exon	145328461	145328682	98	-	.	Parent=ORF2753.mrna1;Target=ORF2753 1 223 +
Chr2	stalkie_big_nohaplotig	CDS	145326870	145327184	.	-	0	Parent=ORF2753.mrna1;Target=ORF2753 496 810 +
Chr2	stalkie_big_nohaplotig	CDS	145327250	145327317	.	-	2	Parent=ORF2753.mrna1;Target=ORF2753 428 495 +
Chr2	stalkie_big_nohaplotig	CDS	145328145	145328271	.	-	0	Parent=ORF2753.mrna1;Target=ORF2753 301 427 +
Chr2	stalkie_big_nohaplotig	CDS	145328328	145328404	.	-	2	Parent=ORF2753.mrna1;Target=ORF2753 224 300 +
Chr2	stalkie_big_nohaplotig	CDS	145328461	145328608	.	-	0	Parent=ORF2753.mrna1;Target=ORF2753 76 223 +
Chr2	gffcl	locus	145346625	145347062	.	+	.	ID=RLOC_00022426;geneIDs=comp142450_c0_seq1.path1;transcripts=comp142450_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145346625	145347062	.	+	.	ID=comp142450_c0_seq1.mrna1;geneID=comp142450_c0_seq1.path1;Name=comp142450_c0_seq1;Dir=indeterminatecoverage=96.5;identity=98.0;matches=432;mismatches=6;indels=3;unknowns=0;Target=comp142450_c0_seq1 441 1 .;CDS_Target=comp142450_c0_seq1 306 253 .;locus=RLOC_00022426
Chr2	stalkie_big_nohaplotig	exon	145346625	145347062	97	+	.	Parent=comp142450_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	145346874	145346927	.	+	0	Parent=comp142450_c0_seq1.mrna1
Chr2	gffcl	locus	145347364	145347624	.	-	.	ID=RLOC_00022427;geneIDs=comp447177_c0_seq1.path1;transcripts=comp447177_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145347364	145347624	.	-	.	ID=comp447177_c0_seq1.mrna1;geneID=comp447177_c0_seq1.path1;Name=comp447177_c0_seq1;Dir=indeterminatecoverage=97.0;identity=99.6;matches=261;mismatches=0;indels=1;unknowns=0;Target=comp447177_c0_seq1 262 1 .;CDS_Target=comp447177_c0_seq1 59 3 .;locus=RLOC_00022427
Chr2	stalkie_big_nohaplotig	exon	145347364	145347624	99	-	.	Parent=comp447177_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	145347566	145347622	.	-	0	Parent=comp447177_c0_seq1.mrna1
Chr2	gffcl	locus	145350118	145350847	.	-	.	ID=RLOC_00022428;geneIDs=FBgn0263749.1.path1;transcripts=FBgn0263749.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145350118	145350847	.	-	.	ID=FBgn0263749.1.mrna1;geneID=FBgn0263749.1.path1;Name=FBgn0263749.1;Dir=sensecoverage=100.0;identity=99.7;matches=634;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022428
Chr2	stalkie_big_nohaplotig	exon	145350118	145350734	99	-	.	Parent=FBgn0263749.1.mrna1;Target=FBgn0263749.1 20 636 +
Chr2	stalkie_big_nohaplotig	exon	145350829	145350847	100	-	.	Parent=FBgn0263749.1.mrna1;Target=FBgn0263749.1 1 19 +
Chr2	stalkie_big_nohaplotig	CDS	145350118	145350734	.	-	2	Parent=FBgn0263749.1.mrna1;Target=FBgn0263749.1 20 636 +
Chr2	stalkie_big_nohaplotig	CDS	145350829	145350847	.	-	0	Parent=FBgn0263749.1.mrna1;Target=FBgn0263749.1 1 19 +
Chr2	gffcl	locus	145360250	145361417	.	-	.	ID=RLOC_00022430;geneIDs=FBgn0039849.1.path1;transcripts=FBgn0039849.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145360250	145361417	.	-	.	ID=FBgn0039849.1.mrna1;geneID=FBgn0039849.1.path1;Name=FBgn0039849.1;Dir=sensecoverage=100.0;identity=99.9;matches=881;mismatches=0;indels=1;unknowns=0;Target=FBgn0039849.1 3 104 +;locus=RLOC_00022430
Chr2	stalkie_big_nohaplotig	exon	145360250	145360365	100	-	.	Parent=FBgn0039849.1.mrna1;Target=FBgn0039849.1 767 882 +
Chr2	stalkie_big_nohaplotig	exon	145360432	145360633	100	-	.	Parent=FBgn0039849.1.mrna1;Target=FBgn0039849.1 565 766 +
Chr2	stalkie_big_nohaplotig	exon	145360712	145360875	100	-	.	Parent=FBgn0039849.1.mrna1;Target=FBgn0039849.1 401 564 +
Chr2	stalkie_big_nohaplotig	exon	145360947	145361155	100	-	.	Parent=FBgn0039849.1.mrna1;Target=FBgn0039849.1 192 400 +
Chr2	stalkie_big_nohaplotig	exon	145361228	145361417	99	-	.	Parent=FBgn0039849.1.mrna1;Target=FBgn0039849.1 1 191 +
Chr2	stalkie_big_nohaplotig	CDS	145361315	145361415	.	-	0	Parent=FBgn0039849.1.mrna1
Chr2	gffcl	locus	145390422	145390902	.	-	.	ID=RLOC_00022431;geneIDs=comp150818_c0_seq1.path1;transcripts=comp150818_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145390422	145390902	.	-	.	ID=comp150818_c0_seq1.mrna1;geneID=comp150818_c0_seq1.path1;Name=comp150818_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=468;mismatches=13;indels=0;unknowns=0;Target=comp150818_c0_seq1 481 1 .;CDS_Target=comp150818_c0_seq1 146 3 .;locus=RLOC_00022431
Chr2	stalkie_big_nohaplotig	exon	145390422	145390902	97	-	.	Parent=comp150818_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	145390757	145390900	.	-	0	Parent=comp150818_c0_seq1.mrna1
Chr2	gffcl	locus	145449591	145457327	.	+	.	ID=RLOC_00022432;geneIDs=FBgn0039844.1.path1;transcripts=FBgn0039844.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145449591	145457327	.	+	.	ID=FBgn0039844.1.mrna1;geneID=FBgn0039844.1.path1;Name=FBgn0039844.1;Dir=sensecoverage=100.0;identity=99.5;matches=1549;mismatches=8;indels=0;unknowns=0;locus=RLOC_00022432
Chr2	stalkie_big_nohaplotig	exon	145449591	145449920	100	+	.	Parent=FBgn0039844.1.mrna1;Target=FBgn0039844.1 1 330 +
Chr2	stalkie_big_nohaplotig	exon	145453877	145454123	99	+	.	Parent=FBgn0039844.1.mrna1;Target=FBgn0039844.1 331 577 +
Chr2	stalkie_big_nohaplotig	exon	145455037	145455256	100	+	.	Parent=FBgn0039844.1.mrna1;Target=FBgn0039844.1 578 797 +
Chr2	stalkie_big_nohaplotig	exon	145455408	145455622	98	+	.	Parent=FBgn0039844.1.mrna1;Target=FBgn0039844.1 798 1012 +
Chr2	stalkie_big_nohaplotig	exon	145455688	145455917	98	+	.	Parent=FBgn0039844.1.mrna1;Target=FBgn0039844.1 1013 1242 +
Chr2	stalkie_big_nohaplotig	exon	145456849	145457101	99	+	.	Parent=FBgn0039844.1.mrna1;Target=FBgn0039844.1 1243 1495 +
Chr2	stalkie_big_nohaplotig	exon	145457266	145457327	100	+	.	Parent=FBgn0039844.1.mrna1;Target=FBgn0039844.1 1496 1557 +
Chr2	stalkie_big_nohaplotig	CDS	145449591	145449920	.	+	0	Parent=FBgn0039844.1.mrna1;Target=FBgn0039844.1 1 330 +
Chr2	stalkie_big_nohaplotig	CDS	145453877	145454123	.	+	0	Parent=FBgn0039844.1.mrna1;Target=FBgn0039844.1 331 577 +
Chr2	stalkie_big_nohaplotig	CDS	145455037	145455256	.	+	2	Parent=FBgn0039844.1.mrna1;Target=FBgn0039844.1 578 797 +
Chr2	stalkie_big_nohaplotig	CDS	145455408	145455622	.	+	1	Parent=FBgn0039844.1.mrna1;Target=FBgn0039844.1 798 1012 +
Chr2	stalkie_big_nohaplotig	CDS	145455688	145455917	.	+	2	Parent=FBgn0039844.1.mrna1;Target=FBgn0039844.1 1013 1242 +
Chr2	stalkie_big_nohaplotig	CDS	145456849	145457101	.	+	0	Parent=FBgn0039844.1.mrna1;Target=FBgn0039844.1 1243 1495 +
Chr2	stalkie_big_nohaplotig	CDS	145457266	145457327	.	+	2	Parent=FBgn0039844.1.mrna1;Target=FBgn0039844.1 1496 1557 +
Chr2	gffcl	locus	145459641	145460209	.	-	.	ID=RLOC_00022433;geneIDs=comp157106_c0_seq1.path1;transcripts=comp157106_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145459641	145460209	.	-	.	ID=comp157106_c0_seq1.mrna1;geneID=comp157106_c0_seq1.path1;Name=comp157106_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.7;matches=540;mismatches=28;indels=2;unknowns=0;Target=comp157106_c0_seq1 569 1 .;CDS_Target=comp157106_c0_seq1 390 307 .;locus=RLOC_00022433
Chr2	stalkie_big_nohaplotig	exon	145459641	145460209	94	-	.	Parent=comp157106_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	145459820	145459904	.	-	0	Parent=comp157106_c0_seq1.mrna1
Chr2	gffcl	locus	145462713	145462912	.	+	.	ID=RLOC_00022434;geneIDs=comp52226_c0_seq1.path1;transcripts=comp52226_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145462713	145462912	.	+	.	ID=comp52226_c0_seq1.mrna1;geneID=comp52226_c0_seq1.path1;Name=comp52226_c0_seq1;Dir=indeterminatecoverage=96.6;identity=100.0;matches=200;mismatches=0;indels=0;unknowns=0;Target=comp52226_c0_seq1 205 6 .;CDS_Target=comp52226_c0_seq1 148 77 .;locus=RLOC_00022434
Chr2	stalkie_big_nohaplotig	exon	145462713	145462912	100	+	.	Parent=comp52226_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	145462784	145462855	.	+	0	Parent=comp52226_c0_seq1.mrna1
Chr2	gffcl	locus	145464352	145466343	.	-	.	ID=RLOC_00022435;geneIDs=FBgn0051204.1.path1;transcripts=FBgn0051204.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145464352	145466343	.	-	.	ID=FBgn0051204.1.mrna1;geneID=FBgn0051204.1.path1;Name=FBgn0051204.1;Dir=sensecoverage=100.0;identity=99.4;matches=1613;mismatches=10;indels=0;unknowns=0;locus=RLOC_00022435
Chr2	stalkie_big_nohaplotig	exon	145464352	145464975	100	-	.	Parent=FBgn0051204.1.mrna1;Target=FBgn0051204.1 1000 1623 +
Chr2	stalkie_big_nohaplotig	exon	145465345	145466343	98	-	.	Parent=FBgn0051204.1.mrna1;Target=FBgn0051204.1 1 999 +
Chr2	stalkie_big_nohaplotig	CDS	145464352	145464975	.	-	0	Parent=FBgn0051204.1.mrna1;Target=FBgn0051204.1 1000 1623 +
Chr2	stalkie_big_nohaplotig	CDS	145465345	145466343	.	-	0	Parent=FBgn0051204.1.mrna1;Target=FBgn0051204.1 1 999 +
Chr2	gffcl	locus	145472416	145474337	.	+	.	ID=RLOC_00022436;geneIDs=ORF420.path1;transcripts=ORF420.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145472416	145474337	.	+	.	ID=ORF420.mrna1;geneID=ORF420.path1;Name=ORF420;Dir=sensecoverage=99.8;identity=98.8;matches=1839;mismatches=23;indels=0;unknowns=0;locus=RLOC_00022436
Chr2	stalkie_big_nohaplotig	exon	145472416	145473410	98	+	.	Parent=ORF420.mrna1;Target=ORF420 5 999 +
Chr2	stalkie_big_nohaplotig	exon	145473471	145474337	98	+	.	Parent=ORF420.mrna1;Target=ORF420 1000 1866 +
Chr2	stalkie_big_nohaplotig	CDS	145472418	145473410	.	+	0	Parent=ORF420.mrna1;Target=ORF420 7 999 +
Chr2	stalkie_big_nohaplotig	CDS	145473471	145474337	.	+	0	Parent=ORF420.mrna1;Target=ORF420 1000 1866 +
Chr2	gffcl	locus	145475819	145477382	.	-	.	ID=RLOC_00022437;geneIDs=ORF710.path1;transcripts=ORF710.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145475819	145477382	.	-	.	ID=ORF710.mrna1;geneID=ORF710.path1;Name=ORF710;Dir=sensecoverage=100.0;identity=98.3;matches=1478;mismatches=25;indels=0;unknowns=0;locus=RLOC_00022437
Chr2	stalkie_big_nohaplotig	exon	145475819	145476379	97	-	.	Parent=ORF710.mrna1;Target=ORF710 943 1503 +
Chr2	stalkie_big_nohaplotig	exon	145476441	145477382	99	-	.	Parent=ORF710.mrna1;Target=ORF710 1 942 +
Chr2	stalkie_big_nohaplotig	CDS	145475819	145476379	.	-	0	Parent=ORF710.mrna1;Target=ORF710 943 1503 +
Chr2	stalkie_big_nohaplotig	CDS	145476441	145477382	.	-	0	Parent=ORF710.mrna1;Target=ORF710 1 942 +
Chr2	gffcl	locus	145486167	145489048	.	-	.	ID=RLOC_00022439;geneIDs=FBgn0039846.1.path1;transcripts=FBgn0039846.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145486167	145489048	.	-	.	ID=FBgn0039846.1.mrna1;geneID=FBgn0039846.1.path1;Name=FBgn0039846.1;Dir=sensecoverage=100.0;identity=99.0;matches=2389;mismatches=22;indels=1;unknowns=0;locus=RLOC_00022439
Chr2	stalkie_big_nohaplotig	exon	145486167	145486328	100	-	.	Parent=FBgn0039846.1.mrna1;Target=FBgn0039846.1 2251 2412 +
Chr2	stalkie_big_nohaplotig	exon	145486397	145486754	99	-	.	Parent=FBgn0039846.1.mrna1;Target=FBgn0039846.1 1893 2250 +
Chr2	stalkie_big_nohaplotig	exon	145486907	145487452	99	-	.	Parent=FBgn0039846.1.mrna1;Target=FBgn0039846.1 1347 1892 +
Chr2	stalkie_big_nohaplotig	exon	145487508	145487635	96	-	.	Parent=FBgn0039846.1.mrna1;Target=FBgn0039846.1 1219 1346 +
Chr2	stalkie_big_nohaplotig	exon	145487710	145488253	99	-	.	Parent=FBgn0039846.1.mrna1;Target=FBgn0039846.1 675 1218 +
Chr2	stalkie_big_nohaplotig	exon	145488313	145488732	98	-	.	Parent=FBgn0039846.1.mrna1;Target=FBgn0039846.1 255 674 +
Chr2	stalkie_big_nohaplotig	exon	145488796	145489048	98	-	.	Parent=FBgn0039846.1.mrna1;Target=FBgn0039846.1 1 254 +
Chr2	stalkie_big_nohaplotig	CDS	145486167	145486328	.	-	0	Parent=FBgn0039846.1.mrna1;Target=FBgn0039846.1 2251 2412 +
Chr2	stalkie_big_nohaplotig	CDS	145486397	145486754	.	-	1	Parent=FBgn0039846.1.mrna1;Target=FBgn0039846.1 1893 2250 +
Chr2	stalkie_big_nohaplotig	CDS	145486907	145487452	.	-	1	Parent=FBgn0039846.1.mrna1;Target=FBgn0039846.1 1347 1892 +
Chr2	stalkie_big_nohaplotig	CDS	145487508	145487635	.	-	0	Parent=FBgn0039846.1.mrna1;Target=FBgn0039846.1 1219 1346 +
Chr2	stalkie_big_nohaplotig	CDS	145487710	145488253	.	-	1	Parent=FBgn0039846.1.mrna1;Target=FBgn0039846.1 675 1218 +
Chr2	stalkie_big_nohaplotig	CDS	145488313	145488732	.	-	1	Parent=FBgn0039846.1.mrna1;Target=FBgn0039846.1 255 674 +
Chr2	stalkie_big_nohaplotig	CDS	145488796	145488923	.	-	0	Parent=FBgn0039846.1.mrna1;Target=FBgn0039846.1 127 254 +
Chr2	gffcl	locus	145489243	145489771	.	+	.	ID=RLOC_00022440;geneIDs=comp153725_c0_seq1.path1;transcripts=comp153725_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145489243	145489771	.	+	.	ID=comp153725_c0_seq1.mrna1;geneID=comp153725_c0_seq1.path1;Name=comp153725_c0_seq1;Dir=antisensecoverage=77.2;identity=96.4;matches=455;mismatches=12;indels=5;unknowns=0;Target=comp153725_c0_seq1 519 605 .;locus=RLOC_00022440
Chr2	stalkie_big_nohaplotig	exon	145489243	145489688	96	+	.	Parent=comp153725_c0_seq1.mrna1;Target=comp153725_c0_seq1 163 605 -
Chr2	stalkie_big_nohaplotig	exon	145489747	145489771	96	+	.	Parent=comp153725_c0_seq1.mrna1;Target=comp153725_c0_seq1 138 162 -
Chr2	stalkie_big_nohaplotig	CDS	145489243	145489329	.	+	0	Parent=comp153725_c0_seq1.mrna1
Chr2	gffcl	locus	145505007	145506885	.	-	.	ID=RLOC_00022441;geneIDs=comp158524_c0_seq1.path1;transcripts=comp158524_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145505007	145506885	.	-	.	ID=comp158524_c0_seq1.mrna1;geneID=comp158524_c0_seq1.path1;Name=comp158524_c0_seq1;Dir=antisensecoverage=86.0;identity=93.3;matches=1606;mismatches=45;indels=70;unknowns=0;Target=comp158524_c0_seq1 644 982 .;locus=RLOC_00022441
Chr2	stalkie_big_nohaplotig	exon	145505007	145505886	99	-	.	Parent=comp158524_c0_seq1.mrna1;Target=comp158524_c0_seq1 271 1151 -
Chr2	stalkie_big_nohaplotig	exon	145505993	145506371	97	-	.	Parent=comp158524_c0_seq1.mrna1;Target=comp158524_c0_seq1 1152 1530 -
Chr2	stalkie_big_nohaplotig	exon	145506425	145506885	77	-	.	Parent=comp158524_c0_seq1.mrna1;Target=comp158524_c0_seq1 1531 1922 -
Chr2	stalkie_big_nohaplotig	CDS	145505380	145505717	.	-	0	Parent=comp158524_c0_seq1.mrna1
Chr2	gffcl	locus	145534315	145535343	.	+	.	ID=RLOC_00022442;geneIDs=ORF1675.path1;transcripts=ORF1675.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145534315	145535343	.	+	.	ID=ORF1675.mrna1;geneID=ORF1675.path1;Name=ORF1675;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1028;mismatches=1;indels=0;unknowns=0;Target=ORF1675 1029 1 .;locus=RLOC_00022442
Chr2	stalkie_big_nohaplotig	exon	145534315	145535343	99	+	.	Parent=ORF1675.mrna1
Chr2	stalkie_big_nohaplotig	CDS	145534315	145535343	.	+	0	Parent=ORF1675.mrna1
Chr2	gffcl	locus	145547885	145548776	.	+	.	ID=RLOC_00022443;geneIDs=comp154551_c0_seq1.path1;transcripts=comp154551_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145547885	145548776	.	+	.	ID=comp154551_c0_seq1.mrna1;geneID=comp154551_c0_seq1.path1;Name=comp154551_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=876;mismatches=13;indels=5;unknowns=0;Target=comp154551_c0_seq1 891 1 .;CDS_Target=comp154551_c0_seq1 450 304 .;locus=RLOC_00022443
Chr2	stalkie_big_nohaplotig	exon	145547885	145548776	97	+	.	Parent=comp154551_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	145548190	145548336	.	+	0	Parent=comp154551_c0_seq1.mrna1
Chr2	gffcl	locus	145561205	145562274	.	+	.	ID=RLOC_00022444;geneIDs=comp159310_c0_seq1.path1;transcripts=comp159310_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145561205	145562274	.	+	.	ID=comp159310_c0_seq1.mrna1;geneID=comp159310_c0_seq1.path1;Name=comp159310_c0_seq1;Dir=sensecoverage=98.7;identity=95.9;matches=976;mismatches=13;indels=29;unknowns=0;locus=RLOC_00022444
Chr2	stalkie_big_nohaplotig	exon	145561205	145561389	98	+	.	Parent=comp159310_c0_seq1.mrna1;Target=comp159310_c0_seq1 13 197 +
Chr2	stalkie_big_nohaplotig	exon	145561442	145562274	95	+	.	Parent=comp159310_c0_seq1.mrna1;Target=comp159310_c0_seq1 198 1001 +
Chr2	stalkie_big_nohaplotig	CDS	145561318	145561389	.	+	0	Parent=comp159310_c0_seq1.mrna1;Target=comp159310_c0_seq1 126 197 +
Chr2	stalkie_big_nohaplotig	CDS	145561442	145562104	.	+	0	Parent=comp159310_c0_seq1.mrna1;Target=comp159310_c0_seq1 198 860 +
Chr2	gffcl	locus	145633695	146317475	.	+	.	ID=RLOC_00022446;geneIDs=comp141924_c0_seq1.path1;transcripts=comp141924_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145633695	146317475	.	+	.	ID=comp141924_c0_seq1.mrna1;geneID=comp141924_c0_seq1.path1;Name=comp141924_c0_seq1;Dir=antisensecoverage=99.6;identity=92.0;matches=253;mismatches=19;indels=3;unknowns=0;Target=comp141924_c0_seq1 233 271 .;locus=RLOC_00022446
Chr2	stalkie_big_nohaplotig	exon	145633695	145633753	93	+	.	Parent=comp141924_c0_seq1.mrna1;Target=comp141924_c0_seq1 215 273 -
Chr2	stalkie_big_nohaplotig	exon	145634750	145634756	100	+	.	Parent=comp141924_c0_seq1.mrna1;Target=comp141924_c0_seq1 208 214 -
Chr2	stalkie_big_nohaplotig	exon	145637393	145637407	86	+	.	Parent=comp141924_c0_seq1.mrna1;Target=comp141924_c0_seq1 194 207 -
Chr2	stalkie_big_nohaplotig	exon	145641713	145641723	90	+	.	Parent=comp141924_c0_seq1.mrna1;Target=comp141924_c0_seq1 183 193 -
Chr2	stalkie_big_nohaplotig	exon	145642117	145642126	80	+	.	Parent=comp141924_c0_seq1.mrna1;Target=comp141924_c0_seq1 173 182 -
Chr2	stalkie_big_nohaplotig	exon	146092830	146092832	100	+	.	Parent=comp141924_c0_seq1.mrna1;Target=comp141924_c0_seq1 170 172 -
Chr2	stalkie_big_nohaplotig	exon	146317306	146317475	92	+	.	Parent=comp141924_c0_seq1.mrna1;Target=comp141924_c0_seq1 2 169 -
Chr2	stalkie_big_nohaplotig	CDS	145633697	145633735	.	+	0	Parent=comp141924_c0_seq1.mrna1
Chr2	gffcl	locus	145655620	145656170	.	-	.	ID=RLOC_00022447;geneIDs=comp154453_c1_seq1.path1;transcripts=comp154453_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145655620	145656170	.	-	.	ID=comp154453_c1_seq1.mrna1;geneID=comp154453_c1_seq1.path1;Name=comp154453_c1_seq1;Dir=indeterminatecoverage=42.8;identity=98.5;matches=543;mismatches=4;indels=4;unknowns=0;Target=comp154453_c1_seq1 1112 566 .;CDS_Target=comp154453_c1_seq1 1066 902 .;locus=RLOC_00022447
Chr2	stalkie_big_nohaplotig	exon	145655620	145656170	98	-	.	Parent=comp154453_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	145655666	145655830	.	-	0	Parent=comp154453_c1_seq1.mrna1
Chr2	gffcl	locus	145661245	145661663	.	+	.	ID=RLOC_00022448;geneIDs=comp147706_c0_seq1.path1;transcripts=comp147706_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145661245	145661663	.	+	.	ID=comp147706_c0_seq1.mrna1;geneID=comp147706_c0_seq1.path1;Name=comp147706_c0_seq1;Dir=indeterminatecoverage=97.0;identity=99.3;matches=416;mismatches=2;indels=1;unknowns=0;Target=comp147706_c0_seq1 418 1 .;CDS_Target=comp147706_c0_seq1 259 101 .;locus=RLOC_00022448
Chr2	stalkie_big_nohaplotig	exon	145661245	145661663	99	+	.	Parent=comp147706_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	145661346	145661504	.	+	0	Parent=comp147706_c0_seq1.mrna1
Chr2	gffcl	locus	145687090	145688256	.	-	.	ID=RLOC_00022450;geneIDs=comp161682_c0_seq1.path1;transcripts=comp161682_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145687090	145688256	.	-	.	ID=comp161682_c0_seq1.mrna1;geneID=comp161682_c0_seq1.path1;Name=comp161682_c0_seq1;Dir=antisensecoverage=99.9;identity=96.4;matches=1070;mismatches=24;indels=16;unknowns=0;Target=comp161682_c0_seq1 876 935 .;locus=RLOC_00022450
Chr2	stalkie_big_nohaplotig	exon	145687090	145687437	98	-	.	Parent=comp161682_c0_seq1.mrna1;Target=comp161682_c0_seq1 2 350 -
Chr2	stalkie_big_nohaplotig	exon	145687503	145688256	95	-	.	Parent=comp161682_c0_seq1.mrna1;Target=comp161682_c0_seq1 351 1103 -
Chr2	stalkie_big_nohaplotig	CDS	145688028	145688088	.	-	0	Parent=comp161682_c0_seq1.mrna1
Chr2	gffcl	locus	145689562	145690591	.	+	.	ID=RLOC_00022451;geneIDs=comp158039_c0_seq1.path1;transcripts=comp158039_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145689562	145690591	.	+	.	ID=comp158039_c0_seq1.mrna1;geneID=comp158039_c0_seq1.path1;Name=comp158039_c0_seq1;Dir=antisensecoverage=99.6;identity=97.9;matches=953;mismatches=19;indels=1;unknowns=0;locus=RLOC_00022451
Chr2	stalkie_big_nohaplotig	exon	145689562	145689934	98	+	.	Parent=comp158039_c0_seq1.mrna1;Target=comp158039_c0_seq1 603 975 -
Chr2	stalkie_big_nohaplotig	exon	145689992	145690591	97	+	.	Parent=comp158039_c0_seq1.mrna1;Target=comp158039_c0_seq1 4 602 -
Chr2	stalkie_big_nohaplotig	CDS	145689899	145689934	.	+	0	Parent=comp158039_c0_seq1.mrna1;Target=comp158039_c0_seq1 603 638 .
Chr2	stalkie_big_nohaplotig	CDS	145689992	145690363	.	+	0	Parent=comp158039_c0_seq1.mrna1;Target=comp158039_c0_seq1 231 602 .
Chr2	gffcl	locus	145706431	145707051	.	-	.	ID=RLOC_00022452;geneIDs=comp149621_c0_seq1.path1;transcripts=comp149621_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145706431	145707051	.	-	.	ID=comp149621_c0_seq1.mrna1;geneID=comp149621_c0_seq1.path1;Name=comp149621_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.0;matches=615;mismatches=5;indels=1;unknowns=0;Target=comp149621_c0_seq1 621 2 .;CDS_Target=comp149621_c0_seq1 100 2 .;locus=RLOC_00022452
Chr2	stalkie_big_nohaplotig	exon	145706431	145707051	99	-	.	Parent=comp149621_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	145706953	145707051	.	-	0	Parent=comp149621_c0_seq1.mrna1
Chr2	gffcl	locus	145708190	145709746	.	-	.	ID=RLOC_00022453;geneIDs=comp161671_c0_seq1.path2;transcripts=comp161671_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	145708190	145709746	.	-	.	ID=comp161671_c0_seq1.mrna2;geneID=comp161671_c0_seq1.path2;Name=comp161671_c0_seq1;Dir=antisensecoverage=99.4;identity=96.6;matches=1346;mismatches=21;indels=27;unknowns=0;Target=comp161671_c0_seq1 824 1123 .;locus=RLOC_00022453
Chr2	stalkie_big_nohaplotig	exon	145708190	145708497	97	-	.	Parent=comp161671_c0_seq1.mrna2;Target=comp161671_c0_seq1 2 311 -
Chr2	stalkie_big_nohaplotig	exon	145708517	145708568	90	-	.	Parent=comp161671_c0_seq1.mrna2;Target=comp161671_c0_seq1 312 361 -
Chr2	stalkie_big_nohaplotig	exon	145708635	145708906	90	-	.	Parent=comp161671_c0_seq1.mrna2;Target=comp161671_c0_seq1 362 642 -
Chr2	stalkie_big_nohaplotig	exon	145709003	145709746	98	-	.	Parent=comp161671_c0_seq1.mrna2;Target=comp161671_c0_seq1 643 1386 -
Chr2	stalkie_big_nohaplotig	CDS	145709184	145709483	.	-	0	Parent=comp161671_c0_seq1.mrna2
Chr2	gffcl	locus	145715805	145722363	.	-	.	ID=RLOC_00022454;geneIDs=comp147421_c0_seq1.path1,comp153352_c1_seq1.path1;transcripts=comp153352_c1_seq1.mrna1,comp147421_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145715805	145721884	.	-	.	ID=comp153352_c1_seq1.mrna1;geneID=comp153352_c1_seq1.path1;Name=comp153352_c1_seq1;Dir=indeterminatecoverage=56.9;identity=100.0;matches=504;mismatches=0;indels=0;unknowns=0;Target=comp153352_c1_seq1 701 519 .;locus=RLOC_00022454
Chr2	stalkie_big_nohaplotig	exon	145715805	145716299	100	-	.	Parent=comp153352_c1_seq1.mrna1;Target=comp153352_c1_seq1 900 406 .
Chr2	stalkie_big_nohaplotig	exon	145721876	145721884	100	-	.	Parent=comp153352_c1_seq1.mrna1;Target=comp153352_c1_seq1 397 389 .
Chr2	stalkie_big_nohaplotig	CDS	145716004	145716186	.	-	0	Parent=comp153352_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145721448	145722363	.	-	.	ID=comp147421_c0_seq1.mrna1;geneID=comp147421_c0_seq1.path1;Name=comp147421_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=914;mismatches=2;indels=0;unknowns=0;Target=comp147421_c0_seq1 916 1 .;CDS_Target=comp147421_c0_seq1 816 655 .;locus=RLOC_00022454
Chr2	stalkie_big_nohaplotig	exon	145721448	145722363	99	-	.	Parent=comp147421_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	145721548	145721709	.	-	0	Parent=comp147421_c0_seq1.mrna1
Chr2	gffcl	locus	145722563	145724316	.	+	.	ID=RLOC_00022455;geneIDs=ORF322.path2;transcripts=ORF322.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	145722563	145724316	.	+	.	ID=ORF322.mrna2;geneID=ORF322.path2;Name=ORF322;Dir=indeterminatecoverage=86.6;identity=99.7;matches=1748;mismatches=6;indels=0;unknowns=0;Target=ORF322 2025 272 .;locus=RLOC_00022455
Chr2	stalkie_big_nohaplotig	exon	145722563	145724316	99	+	.	Parent=ORF322.mrna2
Chr2	stalkie_big_nohaplotig	CDS	145722563	145724316	.	+	1	Parent=ORF322.mrna2
Chr2	gffcl	locus	145727071	145742814	.	+	.	ID=RLOC_00022456;geneIDs=ORF436.path1,comp162415_c0_seq1.path1;transcripts=comp162415_c0_seq1.mrna1,ORF436.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145727071	145729093	.	+	.	ID=comp162415_c0_seq1.mrna1;geneID=comp162415_c0_seq1.path1;Name=comp162415_c0_seq1;Dir=antisensecoverage=82.5;identity=97.8;matches=1898;mismatches=13;indels=30;unknowns=0;locus=RLOC_00022456
Chr2	stalkie_big_nohaplotig	exon	145727071	145728421	99	+	.	Parent=comp162415_c0_seq1.mrna1;Target=comp162415_c0_seq1 1004 2354 -
Chr2	stalkie_big_nohaplotig	exon	145728479	145728550	97	+	.	Parent=comp162415_c0_seq1.mrna1;Target=comp162415_c0_seq1 932 1003 -
Chr2	stalkie_big_nohaplotig	exon	145728606	145729093	93	+	.	Parent=comp162415_c0_seq1.mrna1;Target=comp162415_c0_seq1 414 931 -
Chr2	stalkie_big_nohaplotig	CDS	145727071	145728421	.	+	0	Parent=comp162415_c0_seq1.mrna1;Target=comp162415_c0_seq1 1004 2354 .
Chr2	stalkie_big_nohaplotig	CDS	145728479	145728550	.	+	2	Parent=comp162415_c0_seq1.mrna1;Target=comp162415_c0_seq1 932 1003 .
Chr2	stalkie_big_nohaplotig	CDS	145728606	145728976	.	+	2	Parent=comp162415_c0_seq1.mrna1;Target=comp162415_c0_seq1 531 931 .
Chr2	stalkie_big_nohaplotig	mRNA	145727071	145742814	.	+	.	ID=ORF436.mrna1;geneID=ORF436.path1;Name=ORF436;Dir=sensecoverage=100.0;identity=99.3;matches=1809;mismatches=12;indels=0;unknowns=0;locus=RLOC_00022456
Chr2	stalkie_big_nohaplotig	exon	145727071	145728421	99	+	.	Parent=ORF436.mrna1;Target=ORF436 1 1351 +
Chr2	stalkie_big_nohaplotig	exon	145742290	145742361	100	+	.	Parent=ORF436.mrna1;Target=ORF436 1352 1423 +
Chr2	stalkie_big_nohaplotig	exon	145742417	145742814	98	+	.	Parent=ORF436.mrna1;Target=ORF436 1424 1821 +
Chr2	stalkie_big_nohaplotig	CDS	145727071	145728421	.	+	0	Parent=ORF436.mrna1;Target=ORF436 1 1351 +
Chr2	stalkie_big_nohaplotig	CDS	145742290	145742361	.	+	2	Parent=ORF436.mrna1;Target=ORF436 1352 1423 +
Chr2	stalkie_big_nohaplotig	CDS	145742417	145742814	.	+	2	Parent=ORF436.mrna1;Target=ORF436 1424 1821 +
Chr2	gffcl	locus	145729173	145730542	.	.	.	ID=RLOC_00022457;geneIDs=comp115370_c0_seq1.path1,comp1835584_c0_seq1.path1;transcripts=comp115370_c0_seq1.mrna1,comp1835584_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145729173	145730267	.	+	.	ID=comp115370_c0_seq1.mrna1;geneID=comp115370_c0_seq1.path1;Name=comp115370_c0_seq1;Dir=indeterminatecoverage=98.6;identity=99.8;matches=1093;mismatches=2;indels=0;unknowns=0;Target=comp115370_c0_seq1 1111 17 .;CDS_Target=comp115370_c0_seq1 311 228 .;locus=RLOC_00022457
Chr2	stalkie_big_nohaplotig	exon	145729173	145730267	99	+	.	Parent=comp115370_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	145729384	145729467	.	+	0	Parent=comp115370_c0_seq1.mrna1
Chr2	gffcl	locus	145732393	145736641	.	+	.	ID=RLOC_00022458;geneIDs=ORF322.path1;transcripts=ORF322.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145732393	145736641	.	+	.	ID=ORF322.mrna1;geneID=ORF322.path1;Name=ORF322;Dir=sensecoverage=13.4;identity=100.0;matches=271;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022458
Chr2	stalkie_big_nohaplotig	exon	145732393	145732452	100	+	.	Parent=ORF322.mrna1;Target=ORF322 1 60 +
Chr2	stalkie_big_nohaplotig	exon	145736431	145736641	100	+	.	Parent=ORF322.mrna1;Target=ORF322 61 271 +
Chr2	stalkie_big_nohaplotig	CDS	145732393	145732452	.	+	0	Parent=ORF322.mrna1;Target=ORF322 1 60 +
Chr2	stalkie_big_nohaplotig	CDS	145736431	145736641	.	+	0	Parent=ORF322.mrna1;Target=ORF322 61 271 +
Chr2	gffcl	locus	145755958	145762647	.	-	.	ID=RLOC_00022459;geneIDs=comp159235_c6_seq1.path1;transcripts=comp159235_c6_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145755958	145762647	.	-	.	ID=comp159235_c6_seq1.mrna1;geneID=comp159235_c6_seq1.path1;Name=comp159235_c6_seq1;Dir=sensecoverage=94.4;identity=94.0;matches=1120;mismatches=49;indels=23;unknowns=0;Target=comp159235_c6_seq1 1221 1424 +;locus=RLOC_00022459
Chr2	stalkie_big_nohaplotig	exon	145755958	145756236	96	-	.	Parent=comp159235_c6_seq1.mrna1;Target=comp159235_c6_seq1 1170 1443 +
Chr2	stalkie_big_nohaplotig	exon	145761737	145762201	96	-	.	Parent=comp159235_c6_seq1.mrna1;Target=comp159235_c6_seq1 706 1169 +
Chr2	stalkie_big_nohaplotig	exon	145762216	145762647	89	-	.	Parent=comp159235_c6_seq1.mrna1;Target=comp159235_c6_seq1 80 526 +
Chr2	stalkie_big_nohaplotig	CDS	145755977	145756180	.	-	0	Parent=comp159235_c6_seq1.mrna1
Chr2	gffcl	locus	145765956	145767659	.	-	.	ID=RLOC_00022460;geneIDs=ORF723.path1;transcripts=ORF723.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145765956	145767659	.	-	.	ID=ORF723.mrna1;geneID=ORF723.path1;Name=ORF723;Dir=sensecoverage=100.0;identity=99.7;matches=1481;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022460
Chr2	stalkie_big_nohaplotig	exon	145765956	145766522	99	-	.	Parent=ORF723.mrna1;Target=ORF723 919 1485 +
Chr2	stalkie_big_nohaplotig	exon	145766742	145767659	99	-	.	Parent=ORF723.mrna1;Target=ORF723 1 918 +
Chr2	stalkie_big_nohaplotig	CDS	145765956	145766522	.	-	0	Parent=ORF723.mrna1;Target=ORF723 919 1485 +
Chr2	stalkie_big_nohaplotig	CDS	145766742	145767659	.	-	0	Parent=ORF723.mrna1;Target=ORF723 1 918 +
Chr2	gffcl	locus	145779573	145781139	.	+	.	ID=RLOC_00022461;geneIDs=comp161671_c0_seq1.path1;transcripts=comp161671_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145779573	145781139	.	+	.	ID=comp161671_c0_seq1.mrna1;geneID=comp161671_c0_seq1.path1;Name=comp161671_c0_seq1;Dir=antisensecoverage=99.1;identity=96.5;matches=1357;mismatches=22;indels=27;unknowns=0;Target=comp161671_c0_seq1 824 1123 .;locus=RLOC_00022461
Chr2	stalkie_big_nohaplotig	exon	145779573	145780315	98	+	.	Parent=comp161671_c0_seq1.mrna1;Target=comp161671_c0_seq1 643 1381 -
Chr2	stalkie_big_nohaplotig	exon	145780412	145780691	97	+	.	Parent=comp161671_c0_seq1.mrna1;Target=comp161671_c0_seq1 362 642 -
Chr2	stalkie_big_nohaplotig	exon	145780758	145781139	91	+	.	Parent=comp161671_c0_seq1.mrna1;Target=comp161671_c0_seq1 2 361 -
Chr2	stalkie_big_nohaplotig	CDS	145779835	145780134	.	+	0	Parent=comp161671_c0_seq1.mrna1
Chr2	gffcl	locus	145782278	145782883	.	+	.	ID=RLOC_00022462;geneIDs=comp149621_c0_seq1.path2;transcripts=comp149621_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	145782278	145782883	.	+	.	ID=comp149621_c0_seq1.mrna2;geneID=comp149621_c0_seq1.path2;Name=comp149621_c0_seq1;Dir=indeterminatecoverage=97.6;identity=99.2;matches=601;mismatches=5;indels=0;unknowns=0;Target=comp149621_c0_seq1 607 2 .;CDS_Target=comp149621_c0_seq1 100 2 .;locus=RLOC_00022462
Chr2	stalkie_big_nohaplotig	exon	145782278	145782883	99	+	.	Parent=comp149621_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	145782278	145782376	.	+	0	Parent=comp149621_c0_seq1.mrna2
Chr2	gffcl	locus	145829196	145830024	.	-	.	ID=RLOC_00022463;geneIDs=comp154469_c0_seq1.path1;transcripts=comp154469_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145829196	145830024	.	-	.	ID=comp154469_c0_seq1.mrna1;geneID=comp154469_c0_seq1.path1;Name=comp154469_c0_seq1;Dir=sensecoverage=99.4;identity=98.9;matches=691;mismatches=8;indels=0;unknowns=0;locus=RLOC_00022463
Chr2	stalkie_big_nohaplotig	exon	145829196	145829253	98	-	.	Parent=comp154469_c0_seq1.mrna1;Target=comp154469_c0_seq1 644 701 +
Chr2	stalkie_big_nohaplotig	exon	145829309	145829717	98	-	.	Parent=comp154469_c0_seq1.mrna1;Target=comp154469_c0_seq1 235 643 +
Chr2	stalkie_big_nohaplotig	exon	145829793	145830024	99	-	.	Parent=comp154469_c0_seq1.mrna1;Target=comp154469_c0_seq1 3 234 +
Chr2	stalkie_big_nohaplotig	CDS	145829360	145829717	.	-	1	Parent=comp154469_c0_seq1.mrna1;Target=comp154469_c0_seq1 235 592 +
Chr2	stalkie_big_nohaplotig	CDS	145829793	145829860	.	-	0	Parent=comp154469_c0_seq1.mrna1;Target=comp154469_c0_seq1 167 234 +
Chr2	gffcl	locus	145838471	145840357	.	-	.	ID=RLOC_00022464;geneIDs=ORF2279.path1;transcripts=ORF2279.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145838471	145840357	.	-	.	ID=ORF2279.mrna1;geneID=ORF2279.path1;Name=ORF2279;Dir=sensecoverage=100.0;identity=99.4;matches=877;mismatches=5;indels=0;unknowns=0;locus=RLOC_00022464
Chr2	stalkie_big_nohaplotig	exon	145838471	145838602	98	-	.	Parent=ORF2279.mrna1;Target=ORF2279 751 882 +
Chr2	stalkie_big_nohaplotig	exon	145838865	145838989	99	-	.	Parent=ORF2279.mrna1;Target=ORF2279 626 750 +
Chr2	stalkie_big_nohaplotig	exon	145839050	145839275	99	-	.	Parent=ORF2279.mrna1;Target=ORF2279 400 625 +
Chr2	stalkie_big_nohaplotig	exon	145839336	145839708	99	-	.	Parent=ORF2279.mrna1;Target=ORF2279 27 399 +
Chr2	stalkie_big_nohaplotig	exon	145840332	145840357	100	-	.	Parent=ORF2279.mrna1;Target=ORF2279 1 26 +
Chr2	stalkie_big_nohaplotig	CDS	145838471	145838602	.	-	0	Parent=ORF2279.mrna1;Target=ORF2279 751 882 +
Chr2	stalkie_big_nohaplotig	CDS	145838865	145838989	.	-	2	Parent=ORF2279.mrna1;Target=ORF2279 626 750 +
Chr2	stalkie_big_nohaplotig	CDS	145839050	145839275	.	-	0	Parent=ORF2279.mrna1;Target=ORF2279 400 625 +
Chr2	stalkie_big_nohaplotig	CDS	145839336	145839708	.	-	1	Parent=ORF2279.mrna1;Target=ORF2279 27 399 +
Chr2	stalkie_big_nohaplotig	CDS	145840332	145840357	.	-	0	Parent=ORF2279.mrna1;Target=ORF2279 1 26 +
Chr2	gffcl	locus	145857101	145857607	.	-	.	ID=RLOC_00022465;geneIDs=comp114756_c0_seq1.path1;transcripts=comp114756_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145857101	145857607	.	-	.	ID=comp114756_c0_seq1.mrna1;geneID=comp114756_c0_seq1.path1;Name=comp114756_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=503;mismatches=4;indels=0;unknowns=0;Target=comp114756_c0_seq1 507 1 .;CDS_Target=comp114756_c0_seq1 309 184 .;locus=RLOC_00022465
Chr2	stalkie_big_nohaplotig	exon	145857101	145857607	99	-	.	Parent=comp114756_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	145857299	145857424	.	-	0	Parent=comp114756_c0_seq1.mrna1
Chr2	gffcl	locus	145911382	145922687	.	+	.	ID=RLOC_00022466;geneIDs=FBgn0040238.1.path1;transcripts=FBgn0040238.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145911382	145922687	.	+	.	ID=FBgn0040238.1.mrna1;geneID=FBgn0040238.1.path1;Name=FBgn0040238.1;Dir=sensecoverage=100.0;identity=99.7;matches=2378;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022466
Chr2	stalkie_big_nohaplotig	exon	145911382	145911509	97	+	.	Parent=FBgn0040238.1.mrna1;Target=FBgn0040238.1 1 128 +
Chr2	stalkie_big_nohaplotig	exon	145916509	145916619	100	+	.	Parent=FBgn0040238.1.mrna1;Target=FBgn0040238.1 129 239 +
Chr2	stalkie_big_nohaplotig	exon	145916690	145917446	99	+	.	Parent=FBgn0040238.1.mrna1;Target=FBgn0040238.1 240 996 +
Chr2	stalkie_big_nohaplotig	exon	145917515	145917853	99	+	.	Parent=FBgn0040238.1.mrna1;Target=FBgn0040238.1 997 1335 +
Chr2	stalkie_big_nohaplotig	exon	145918902	145919523	99	+	.	Parent=FBgn0040238.1.mrna1;Target=FBgn0040238.1 1336 1957 +
Chr2	stalkie_big_nohaplotig	exon	145919661	145919705	100	+	.	Parent=FBgn0040238.1.mrna1;Target=FBgn0040238.1 1958 2002 +
Chr2	stalkie_big_nohaplotig	exon	145922305	145922687	100	+	.	Parent=FBgn0040238.1.mrna1;Target=FBgn0040238.1 2003 2385 +
Chr2	stalkie_big_nohaplotig	CDS	145911382	145911509	.	+	0	Parent=FBgn0040238.1.mrna1;Target=FBgn0040238.1 1 128 +
Chr2	stalkie_big_nohaplotig	CDS	145916509	145916619	.	+	1	Parent=FBgn0040238.1.mrna1;Target=FBgn0040238.1 129 239 +
Chr2	stalkie_big_nohaplotig	CDS	145916690	145917446	.	+	1	Parent=FBgn0040238.1.mrna1;Target=FBgn0040238.1 240 996 +
Chr2	stalkie_big_nohaplotig	CDS	145917515	145917853	.	+	0	Parent=FBgn0040238.1.mrna1;Target=FBgn0040238.1 997 1335 +
Chr2	stalkie_big_nohaplotig	CDS	145918902	145919523	.	+	0	Parent=FBgn0040238.1.mrna1;Target=FBgn0040238.1 1336 1957 +
Chr2	stalkie_big_nohaplotig	CDS	145919661	145919705	.	+	2	Parent=FBgn0040238.1.mrna1;Target=FBgn0040238.1 1958 2002 +
Chr2	stalkie_big_nohaplotig	CDS	145922305	145922687	.	+	2	Parent=FBgn0040238.1.mrna1;Target=FBgn0040238.1 2003 2385 +
Chr2	gffcl	locus	145925675	145926663	.	+	.	ID=RLOC_00022467;geneIDs=comp141182_c0_seq1.path1;transcripts=comp141182_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145925675	145926663	.	+	.	ID=comp141182_c0_seq1.mrna1;geneID=comp141182_c0_seq1.path1;Name=comp141182_c0_seq1;Dir=antisensecoverage=99.9;identity=98.7;matches=913;mismatches=11;indels=1;unknowns=0;locus=RLOC_00022467
Chr2	stalkie_big_nohaplotig	exon	145925675	145926085	99	+	.	Parent=comp141182_c0_seq1.mrna1;Target=comp141182_c0_seq1 515 925 -
Chr2	stalkie_big_nohaplotig	exon	145926151	145926663	97	+	.	Parent=comp141182_c0_seq1.mrna1;Target=comp141182_c0_seq1 1 514 -
Chr2	stalkie_big_nohaplotig	CDS	145925778	145926085	.	+	0	Parent=comp141182_c0_seq1.mrna1;Target=comp141182_c0_seq1 515 822 .
Chr2	stalkie_big_nohaplotig	CDS	145926151	145926283	.	+	1	Parent=comp141182_c0_seq1.mrna1;Target=comp141182_c0_seq1 382 514 .
Chr2	gffcl	locus	145927744	145929226	.	+	.	ID=RLOC_00022468;geneIDs=FBgn0039702.1.path1;transcripts=FBgn0039702.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145927744	145929226	.	+	.	ID=FBgn0039702.1.mrna1;geneID=FBgn0039702.1.path1;Name=FBgn0039702.1;Dir=sensecoverage=100.0;identity=99.4;matches=1416;mismatches=9;indels=0;unknowns=0;locus=RLOC_00022468
Chr2	stalkie_big_nohaplotig	exon	145927744	145928126	98	+	.	Parent=FBgn0039702.1.mrna1;Target=FBgn0039702.1 1 383 +
Chr2	stalkie_big_nohaplotig	exon	145928185	145929226	99	+	.	Parent=FBgn0039702.1.mrna1;Target=FBgn0039702.1 384 1425 +
Chr2	stalkie_big_nohaplotig	CDS	145927744	145928126	.	+	0	Parent=FBgn0039702.1.mrna1;Target=FBgn0039702.1 1 383 +
Chr2	stalkie_big_nohaplotig	CDS	145928185	145929226	.	+	1	Parent=FBgn0039702.1.mrna1;Target=FBgn0039702.1 384 1425 +
Chr2	gffcl	locus	145929457	145930241	.	-	.	ID=RLOC_00022469;geneIDs=comp153828_c0_seq1.path1;transcripts=comp153828_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145929457	145930241	.	-	.	ID=comp153828_c0_seq1.mrna1;geneID=comp153828_c0_seq1.path1;Name=comp153828_c0_seq1;Dir=sensecoverage=100.0;identity=99.3;matches=729;mismatches=5;indels=0;unknowns=0;Target=comp153828_c0_seq1 3 155 +;locus=RLOC_00022469
Chr2	stalkie_big_nohaplotig	exon	145929457	145929830	99	-	.	Parent=comp153828_c0_seq1.mrna1;Target=comp153828_c0_seq1 361 734 +
Chr2	stalkie_big_nohaplotig	exon	145929882	145930241	99	-	.	Parent=comp153828_c0_seq1.mrna1;Target=comp153828_c0_seq1 1 360 +
Chr2	stalkie_big_nohaplotig	CDS	145930087	145930239	.	-	0	Parent=comp153828_c0_seq1.mrna1
Chr2	gffcl	locus	145958083	145959069	.	+	.	ID=RLOC_00022471;geneIDs=ORF1835.path2;transcripts=ORF1835.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	145958083	145959069	.	+	.	ID=ORF1835.mrna2;geneID=ORF1835.path2;Name=ORF1835;Dir=indeterminatecoverage=100.0;identity=99.0;matches=977;mismatches=10;indels=0;unknowns=0;Target=ORF1835 987 1 .;locus=RLOC_00022471
Chr2	stalkie_big_nohaplotig	exon	145958083	145959069	98	+	.	Parent=ORF1835.mrna2
Chr2	stalkie_big_nohaplotig	CDS	145958083	145959069	.	+	0	Parent=ORF1835.mrna2
Chr2	gffcl	locus	145998151	145998751	.	+	.	ID=RLOC_00022472;geneIDs=comp58454_c0_seq1.path1;transcripts=comp58454_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	145998151	145998751	.	+	.	ID=comp58454_c0_seq1.mrna1;geneID=comp58454_c0_seq1.path1;Name=comp58454_c0_seq1;Dir=indeterminatecoverage=99.5;identity=98.7;matches=593;mismatches=8;indels=0;unknowns=0;Target=comp58454_c0_seq1 603 3 .;CDS_Target=comp58454_c0_seq1 14 3 .;locus=RLOC_00022472
Chr2	stalkie_big_nohaplotig	exon	145998151	145998751	98	+	.	Parent=comp58454_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	145998151	145998162	.	+	0	Parent=comp58454_c0_seq1.mrna1
Chr2	gffcl	locus	146000125	146000480	.	+	.	ID=RLOC_00022473;geneIDs=comp141194_c0_seq1.path1;transcripts=comp141194_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146000125	146000480	.	+	.	ID=comp141194_c0_seq1.mrna1;geneID=comp141194_c0_seq1.path1;Name=comp141194_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.5;matches=347;mismatches=9;indels=19;unknowns=0;Target=comp141194_c0_seq1 375 1 .;CDS_Target=comp141194_c0_seq1 79 2 .;locus=RLOC_00022473
Chr2	stalkie_big_nohaplotig	exon	146000125	146000480	92	+	.	Parent=comp141194_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146000126	146000203	.	+	0	Parent=comp141194_c0_seq1.mrna1
Chr2	gffcl	locus	146000865	146001319	.	-	.	ID=RLOC_00022474;geneIDs=comp114239_c0_seq1.path1;transcripts=comp114239_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146000865	146001319	.	-	.	ID=comp114239_c0_seq1.mrna1;geneID=comp114239_c0_seq1.path1;Name=comp114239_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=450;mismatches=5;indels=1;unknowns=0;Target=comp114239_c0_seq1 456 1 .;CDS_Target=comp114239_c0_seq1 369 301 .;locus=RLOC_00022474
Chr2	stalkie_big_nohaplotig	exon	146000865	146001319	98	-	.	Parent=comp114239_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146000952	146001020	.	-	0	Parent=comp114239_c0_seq1.mrna1
Chr2	gffcl	locus	146049654	146050540	.	.	.	ID=RLOC_00022475;geneIDs=comp140087_c0_seq1.path1,comp146978_c0_seq1.path1;transcripts=comp146978_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146049654	146050102	.	+	.	ID=comp146978_c0_seq1.mrna1;geneID=comp146978_c0_seq1.path1;Name=comp146978_c0_seq1;Dir=sensecoverage=85.5;identity=98.7;matches=378;mismatches=5;indels=0;unknowns=0;locus=RLOC_00022475
Chr2	stalkie_big_nohaplotig	exon	146049654	146049945	98	+	.	Parent=comp146978_c0_seq1.mrna1;Target=comp146978_c0_seq1 1 292 +
Chr2	stalkie_big_nohaplotig	exon	146050012	146050102	100	+	.	Parent=comp146978_c0_seq1.mrna1;Target=comp146978_c0_seq1 293 383 +
Chr2	stalkie_big_nohaplotig	CDS	146049720	146049945	.	+	0	Parent=comp146978_c0_seq1.mrna1;Target=comp146978_c0_seq1 67 292 +
Chr2	stalkie_big_nohaplotig	CDS	146050012	146050028	.	+	2	Parent=comp146978_c0_seq1.mrna1;Target=comp146978_c0_seq1 293 309 +
Chr2	gffcl	locus	146087782	146089469	.	+	.	ID=RLOC_00022476;geneIDs=FBgn0037553.1.path1;transcripts=FBgn0037553.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146087782	146089469	.	+	.	ID=FBgn0037553.1.mrna1;geneID=FBgn0037553.1.path1;Name=FBgn0037553.1;Dir=indeterminatecoverage=99.9;identity=99.4;matches=1678;mismatches=10;indels=0;unknowns=0;Target=FBgn0037553.1 1689 2 .;CDS_Target=FBgn0037553.1 1689 4 .;locus=RLOC_00022476
Chr2	stalkie_big_nohaplotig	exon	146087782	146089469	99	+	.	Parent=FBgn0037553.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146087784	146089469	.	+	0	Parent=FBgn0037553.1.mrna1
Chr2	gffcl	locus	146187498	146253664	.	+	.	ID=RLOC_00022477;geneIDs=FBgn0001138.1.path1;transcripts=FBgn0001138.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146187498	146253664	.	+	.	ID=FBgn0001138.1.mrna1;geneID=FBgn0001138.1.path1;Name=FBgn0001138.1;Dir=sensecoverage=72.0;identity=99.8;matches=1392;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022477
Chr2	stalkie_big_nohaplotig	exon	146187498	146187813	100	+	.	Parent=FBgn0001138.1.mrna1;Target=FBgn0001138.1 1 316 +
Chr2	stalkie_big_nohaplotig	exon	146227376	146227656	100	+	.	Parent=FBgn0001138.1.mrna1;Target=FBgn0001138.1 317 597 +
Chr2	stalkie_big_nohaplotig	exon	146228900	146229551	99	+	.	Parent=FBgn0001138.1.mrna1;Target=FBgn0001138.1 598 1249 +
Chr2	stalkie_big_nohaplotig	exon	146253519	146253664	99	+	.	Parent=FBgn0001138.1.mrna1;Target=FBgn0001138.1 1250 1395 +
Chr2	stalkie_big_nohaplotig	CDS	146187498	146187813	.	+	0	Parent=FBgn0001138.1.mrna1;Target=FBgn0001138.1 1 316 +
Chr2	stalkie_big_nohaplotig	CDS	146227376	146227656	.	+	2	Parent=FBgn0001138.1.mrna1;Target=FBgn0001138.1 317 597 +
Chr2	stalkie_big_nohaplotig	CDS	146228900	146229551	.	+	0	Parent=FBgn0001138.1.mrna1;Target=FBgn0001138.1 598 1249 +
Chr2	stalkie_big_nohaplotig	CDS	146253519	146253664	.	+	2	Parent=FBgn0001138.1.mrna1;Target=FBgn0001138.1 1250 1395 +
Chr2	gffcl	locus	146198300	146199844	.	-	.	ID=RLOC_00022478;geneIDs=comp29431_c0_seq1.path1;transcripts=comp29431_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146198300	146199844	.	-	.	ID=comp29431_c0_seq1.mrna1;geneID=comp29431_c0_seq1.path1;Name=comp29431_c0_seq1;Dir=antisensecoverage=97.5;identity=97.3;matches=567;mismatches=9;indels=7;unknowns=0;Target=comp29431_c0_seq1 77 265 .;locus=RLOC_00022478
Chr2	stalkie_big_nohaplotig	exon	146198300	146198777	97	-	.	Parent=comp29431_c0_seq1.mrna1;Target=comp29431_c0_seq1 16 486 -
Chr2	stalkie_big_nohaplotig	exon	146199740	146199844	98	-	.	Parent=comp29431_c0_seq1.mrna1;Target=comp29431_c0_seq1 487 591 -
Chr2	stalkie_big_nohaplotig	CDS	146198361	146198549	.	-	0	Parent=comp29431_c0_seq1.mrna1
Chr2	gffcl	locus	146308091	146313071	.	-	.	ID=RLOC_00022479;geneIDs=FBgn0037551.1.path1;transcripts=FBgn0037551.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146308091	146313071	.	-	.	ID=FBgn0037551.1.mrna1;geneID=FBgn0037551.1.path1;Name=FBgn0037551.1;Dir=sensecoverage=100.0;identity=99.8;matches=563;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022479
Chr2	stalkie_big_nohaplotig	exon	146308091	146308208	100	-	.	Parent=FBgn0037551.1.mrna1;Target=FBgn0037551.1 447 564 +
Chr2	stalkie_big_nohaplotig	exon	146308277	146308438	100	-	.	Parent=FBgn0037551.1.mrna1;Target=FBgn0037551.1 285 446 +
Chr2	stalkie_big_nohaplotig	exon	146310435	146310589	100	-	.	Parent=FBgn0037551.1.mrna1;Target=FBgn0037551.1 130 284 +
Chr2	stalkie_big_nohaplotig	exon	146312943	146313071	99	-	.	Parent=FBgn0037551.1.mrna1;Target=FBgn0037551.1 1 129 +
Chr2	stalkie_big_nohaplotig	CDS	146308091	146308208	.	-	1	Parent=FBgn0037551.1.mrna1;Target=FBgn0037551.1 447 564 +
Chr2	stalkie_big_nohaplotig	CDS	146308277	146308438	.	-	1	Parent=FBgn0037551.1.mrna1;Target=FBgn0037551.1 285 446 +
Chr2	stalkie_big_nohaplotig	CDS	146310435	146310589	.	-	0	Parent=FBgn0037551.1.mrna1;Target=FBgn0037551.1 130 284 +
Chr2	stalkie_big_nohaplotig	CDS	146312943	146313071	.	-	0	Parent=FBgn0037551.1.mrna1;Target=FBgn0037551.1 1 129 +
Chr2	gffcl	locus	146315006	146315355	.	+	.	ID=RLOC_00022480;geneIDs=comp159884_c1_seq1.path1;transcripts=comp159884_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146315006	146315355	.	+	.	ID=comp159884_c1_seq1.mrna1;geneID=comp159884_c1_seq1.path1;Name=comp159884_c1_seq1;Dir=indeterminatecoverage=17.0;identity=97.7;matches=342;mismatches=8;indels=0;unknowns=0;Target=comp159884_c1_seq1 350 1 .;locus=RLOC_00022480
Chr2	stalkie_big_nohaplotig	exon	146315006	146315355	97	+	.	Parent=comp159884_c1_seq1.mrna1
Chr2	gffcl	locus	146315943	146316680	.	-	.	ID=RLOC_00022481;geneIDs=FBgn0037550.1.path1;transcripts=FBgn0037550.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146315943	146316680	.	-	.	ID=FBgn0037550.1.mrna1;geneID=FBgn0037550.1.path1;Name=FBgn0037550.1;Dir=sensecoverage=100.0;identity=99.0;matches=677;mismatches=6;indels=1;unknowns=0;locus=RLOC_00022481
Chr2	stalkie_big_nohaplotig	exon	146315943	146316586	99	-	.	Parent=FBgn0037550.1.mrna1;Target=FBgn0037550.1 41 684 +
Chr2	stalkie_big_nohaplotig	exon	146316642	146316680	97	-	.	Parent=FBgn0037550.1.mrna1;Target=FBgn0037550.1 1 40 +
Chr2	stalkie_big_nohaplotig	CDS	146316574	146316586	.	-	2	Parent=FBgn0037550.1.mrna1;Target=FBgn0037550.1 41 53 +
Chr2	stalkie_big_nohaplotig	CDS	146316642	146316678	.	-	0	Parent=FBgn0037550.1.mrna1;Target=FBgn0037550.1 3 40 +
Chr2	gffcl	locus	146317904	146320376	.	+	.	ID=RLOC_00022482;geneIDs=FBgn0010173.1.path1;transcripts=FBgn0010173.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146317904	146320376	.	+	.	ID=FBgn0010173.1.mrna1;geneID=FBgn0010173.1.path1;Name=FBgn0010173.1;Dir=sensecoverage=100.0;identity=98.9;matches=1807;mismatches=17;indels=3;unknowns=0;locus=RLOC_00022482
Chr2	stalkie_big_nohaplotig	exon	146317904	146317954	100	+	.	Parent=FBgn0010173.1.mrna1;Target=FBgn0010173.1 1 51 +
Chr2	stalkie_big_nohaplotig	exon	146318067	146318308	99	+	.	Parent=FBgn0010173.1.mrna1;Target=FBgn0010173.1 52 293 +
Chr2	stalkie_big_nohaplotig	exon	146318368	146318987	98	+	.	Parent=FBgn0010173.1.mrna1;Target=FBgn0010173.1 294 916 +
Chr2	stalkie_big_nohaplotig	exon	146319218	146319330	99	+	.	Parent=FBgn0010173.1.mrna1;Target=FBgn0010173.1 917 1029 +
Chr2	stalkie_big_nohaplotig	exon	146319390	146319616	99	+	.	Parent=FBgn0010173.1.mrna1;Target=FBgn0010173.1 1030 1256 +
Chr2	stalkie_big_nohaplotig	exon	146319677	146319941	99	+	.	Parent=FBgn0010173.1.mrna1;Target=FBgn0010173.1 1257 1521 +
Chr2	stalkie_big_nohaplotig	exon	146320008	146320202	98	+	.	Parent=FBgn0010173.1.mrna1;Target=FBgn0010173.1 1522 1716 +
Chr2	stalkie_big_nohaplotig	exon	146320266	146320376	98	+	.	Parent=FBgn0010173.1.mrna1;Target=FBgn0010173.1 1717 1827 +
Chr2	stalkie_big_nohaplotig	CDS	146317904	146317954	.	+	0	Parent=FBgn0010173.1.mrna1;Target=FBgn0010173.1 1 51 +
Chr2	stalkie_big_nohaplotig	CDS	146318067	146318308	.	+	0	Parent=FBgn0010173.1.mrna1;Target=FBgn0010173.1 52 293 +
Chr2	stalkie_big_nohaplotig	CDS	146318368	146318987	.	+	1	Parent=FBgn0010173.1.mrna1;Target=FBgn0010173.1 294 916 +
Chr2	stalkie_big_nohaplotig	CDS	146319218	146319330	.	+	2	Parent=FBgn0010173.1.mrna1;Target=FBgn0010173.1 917 1029 +
Chr2	stalkie_big_nohaplotig	CDS	146319390	146319616	.	+	0	Parent=FBgn0010173.1.mrna1;Target=FBgn0010173.1 1030 1256 +
Chr2	stalkie_big_nohaplotig	CDS	146319677	146319941	.	+	1	Parent=FBgn0010173.1.mrna1;Target=FBgn0010173.1 1257 1521 +
Chr2	stalkie_big_nohaplotig	CDS	146320008	146320202	.	+	0	Parent=FBgn0010173.1.mrna1;Target=FBgn0010173.1 1522 1716 +
Chr2	stalkie_big_nohaplotig	CDS	146320266	146320376	.	+	0	Parent=FBgn0010173.1.mrna1;Target=FBgn0010173.1 1717 1827 +
Chr2	gffcl	locus	146321986	146322614	.	-	.	ID=RLOC_00022483;geneIDs=comp50743_c0_seq1.path1,comp142236_c0_seq1.path1;transcripts=comp142236_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146322235	146322614	.	-	.	ID=comp142236_c0_seq1.mrna1;geneID=comp142236_c0_seq1.path1;Name=comp142236_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.2;matches=377;mismatches=2;indels=1;unknowns=0;Target=comp142236_c0_seq1 381 3 .;CDS_Target=comp142236_c0_seq1 210 130 .;locus=RLOC_00022483
Chr2	stalkie_big_nohaplotig	exon	146322235	146322614	99	-	.	Parent=comp142236_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146322406	146322486	.	-	0	Parent=comp142236_c0_seq1.mrna1
Chr2	gffcl	locus	146326289	146382518	.	-	.	ID=RLOC_00022484;geneIDs=FBgn0264324.1.path1;transcripts=FBgn0264324.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146326289	146382518	.	-	.	ID=FBgn0264324.1.mrna1;geneID=FBgn0264324.1.path1;Name=FBgn0264324.1;Dir=sensecoverage=100.0;identity=99.3;matches=5418;mismatches=39;indels=0;unknowns=0;locus=RLOC_00022484
Chr2	stalkie_big_nohaplotig	exon	146326289	146327404	99	-	.	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 4342 5457 +
Chr2	stalkie_big_nohaplotig	exon	146327472	146327708	100	-	.	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 4105 4341 +
Chr2	stalkie_big_nohaplotig	exon	146327771	146327992	99	-	.	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 3883 4104 +
Chr2	stalkie_big_nohaplotig	exon	146328142	146328316	100	-	.	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 3708 3882 +
Chr2	stalkie_big_nohaplotig	exon	146328375	146328581	99	-	.	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 3501 3707 +
Chr2	stalkie_big_nohaplotig	exon	146330295	146330404	99	-	.	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 3391 3500 +
Chr2	stalkie_big_nohaplotig	exon	146330487	146331307	99	-	.	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 2570 3390 +
Chr2	stalkie_big_nohaplotig	exon	146331375	146332887	99	-	.	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 1057 2569 +
Chr2	stalkie_big_nohaplotig	exon	146332950	146333167	98	-	.	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 839 1056 +
Chr2	stalkie_big_nohaplotig	exon	146333242	146333485	99	-	.	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 595 838 +
Chr2	stalkie_big_nohaplotig	exon	146333557	146333677	99	-	.	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 474 594 +
Chr2	stalkie_big_nohaplotig	exon	146360560	146360708	100	-	.	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 325 473 +
Chr2	stalkie_big_nohaplotig	exon	146360780	146361021	99	-	.	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 83 324 +
Chr2	stalkie_big_nohaplotig	exon	146382437	146382518	100	-	.	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 1 82 +
Chr2	stalkie_big_nohaplotig	CDS	146326289	146327404	.	-	0	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 4342 5457 +
Chr2	stalkie_big_nohaplotig	CDS	146327472	146327708	.	-	0	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 4105 4341 +
Chr2	stalkie_big_nohaplotig	CDS	146327771	146327992	.	-	0	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 3883 4104 +
Chr2	stalkie_big_nohaplotig	CDS	146328142	146328316	.	-	1	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 3708 3882 +
Chr2	stalkie_big_nohaplotig	CDS	146328375	146328581	.	-	1	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 3501 3707 +
Chr2	stalkie_big_nohaplotig	CDS	146330295	146330404	.	-	0	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 3391 3500 +
Chr2	stalkie_big_nohaplotig	CDS	146330487	146331307	.	-	2	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 2570 3390 +
Chr2	stalkie_big_nohaplotig	CDS	146331375	146332887	.	-	0	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 1057 2569 +
Chr2	stalkie_big_nohaplotig	CDS	146332950	146333167	.	-	2	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 839 1056 +
Chr2	stalkie_big_nohaplotig	CDS	146333242	146333485	.	-	0	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 595 838 +
Chr2	stalkie_big_nohaplotig	CDS	146333557	146333677	.	-	1	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 474 594 +
Chr2	stalkie_big_nohaplotig	CDS	146360560	146360708	.	-	0	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 325 473 +
Chr2	stalkie_big_nohaplotig	CDS	146360780	146361021	.	-	2	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 83 324 +
Chr2	stalkie_big_nohaplotig	CDS	146382437	146382518	.	-	0	Parent=FBgn0264324.1.mrna1;Target=FBgn0264324.1 1 82 +
Chr2	gffcl	locus	146353338	146358225	.	+	.	ID=RLOC_00022485;geneIDs=FBgn0028373.1.path1;transcripts=FBgn0028373.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146353338	146358225	.	+	.	ID=FBgn0028373.1.mrna1;geneID=FBgn0028373.1.path1;Name=FBgn0028373.1;Dir=sensecoverage=100.0;identity=99.8;matches=1174;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022485
Chr2	stalkie_big_nohaplotig	exon	146353338	146353533	98	+	.	Parent=FBgn0028373.1.mrna1;Target=FBgn0028373.1 1 196 +
Chr2	stalkie_big_nohaplotig	exon	146357051	146357259	100	+	.	Parent=FBgn0028373.1.mrna1;Target=FBgn0028373.1 197 405 +
Chr2	stalkie_big_nohaplotig	exon	146357329	146357789	100	+	.	Parent=FBgn0028373.1.mrna1;Target=FBgn0028373.1 406 866 +
Chr2	stalkie_big_nohaplotig	exon	146357849	146358002	100	+	.	Parent=FBgn0028373.1.mrna1;Target=FBgn0028373.1 867 1020 +
Chr2	stalkie_big_nohaplotig	exon	146358070	146358225	100	+	.	Parent=FBgn0028373.1.mrna1;Target=FBgn0028373.1 1021 1176 +
Chr2	stalkie_big_nohaplotig	CDS	146353338	146353533	.	+	0	Parent=FBgn0028373.1.mrna1;Target=FBgn0028373.1 1 196 +
Chr2	stalkie_big_nohaplotig	CDS	146357051	146357259	.	+	2	Parent=FBgn0028373.1.mrna1;Target=FBgn0028373.1 197 405 +
Chr2	stalkie_big_nohaplotig	CDS	146357329	146357789	.	+	0	Parent=FBgn0028373.1.mrna1;Target=FBgn0028373.1 406 866 +
Chr2	stalkie_big_nohaplotig	CDS	146357849	146358002	.	+	1	Parent=FBgn0028373.1.mrna1;Target=FBgn0028373.1 867 1020 +
Chr2	stalkie_big_nohaplotig	CDS	146358070	146358225	.	+	0	Parent=FBgn0028373.1.mrna1;Target=FBgn0028373.1 1021 1176 +
Chr2	gffcl	locus	146359092	146360033	.	+	.	ID=RLOC_00022486;geneIDs=comp158574_c0_seq1.path1;transcripts=comp158574_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146359092	146360033	.	+	.	ID=comp158574_c0_seq1.mrna1;geneID=comp158574_c0_seq1.path1;Name=comp158574_c0_seq1;Dir=indeterminatecoverage=96.8;identity=88.6;matches=891;mismatches=32;indels=83;unknowns=0;Target=comp158574_c0_seq1 1000 14 .;CDS_Target=comp158574_c0_seq1 819 817 .;locus=RLOC_00022486
Chr2	stalkie_big_nohaplotig	exon	146359092	146360033	88	+	.	Parent=comp158574_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146359851	146359853	.	+	0	Parent=comp158574_c0_seq1.mrna1
Chr2	gffcl	locus	146360120	146360501	.	+	.	ID=RLOC_00022487;geneIDs=comp148364_c0_seq1.path1;transcripts=comp148364_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146360120	146360501	.	+	.	ID=comp148364_c0_seq1.mrna1;geneID=comp148364_c0_seq1.path1;Name=comp148364_c0_seq1;Dir=indeterminatecoverage=95.5;identity=99.7;matches=381;mismatches=1;indels=0;unknowns=0;Target=comp148364_c0_seq1 400 19 .;CDS_Target=comp148364_c0_seq1 388 299 .;locus=RLOC_00022487
Chr2	stalkie_big_nohaplotig	exon	146360120	146360501	99	+	.	Parent=comp148364_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146360400	146360489	.	+	0	Parent=comp148364_c0_seq1.mrna1
Chr2	gffcl	locus	146376597	146377603	.	-	.	ID=RLOC_00022488;geneIDs=comp142947_c0_seq1.path1;transcripts=comp142947_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146376597	146377603	.	-	.	ID=comp142947_c0_seq1.mrna1;geneID=comp142947_c0_seq1.path1;Name=comp142947_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.2;matches=989;mismatches=8;indels=21;unknowns=0;Target=comp142947_c0_seq1 1009 2 .;CDS_Target=comp142947_c0_seq1 809 663 .;locus=RLOC_00022488
Chr2	stalkie_big_nohaplotig	exon	146376597	146377603	97	-	.	Parent=comp142947_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146376802	146376948	.	-	0	Parent=comp142947_c0_seq1.mrna1
Chr2	gffcl	locus	146392398	146422542	.	-	.	ID=RLOC_00022489;geneIDs=FBgn0038632.1.path1;transcripts=FBgn0038632.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146392398	146422542	.	-	.	ID=FBgn0038632.1.mrna1;geneID=FBgn0038632.1.path1;Name=FBgn0038632.1;Dir=sensecoverage=100.0;identity=99.3;matches=593;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022489
Chr2	stalkie_big_nohaplotig	exon	146392398	146392621	99	-	.	Parent=FBgn0038632.1.mrna1;Target=FBgn0038632.1 374 597 +
Chr2	stalkie_big_nohaplotig	exon	146392720	146392830	99	-	.	Parent=FBgn0038632.1.mrna1;Target=FBgn0038632.1 263 373 +
Chr2	stalkie_big_nohaplotig	exon	146396583	146396777	98	-	.	Parent=FBgn0038632.1.mrna1;Target=FBgn0038632.1 68 262 +
Chr2	stalkie_big_nohaplotig	exon	146422476	146422542	100	-	.	Parent=FBgn0038632.1.mrna1;Target=FBgn0038632.1 1 67 +
Chr2	stalkie_big_nohaplotig	CDS	146392398	146392621	.	-	2	Parent=FBgn0038632.1.mrna1;Target=FBgn0038632.1 374 597 +
Chr2	stalkie_big_nohaplotig	CDS	146392720	146392830	.	-	2	Parent=FBgn0038632.1.mrna1;Target=FBgn0038632.1 263 373 +
Chr2	stalkie_big_nohaplotig	CDS	146396583	146396777	.	-	2	Parent=FBgn0038632.1.mrna1;Target=FBgn0038632.1 68 262 +
Chr2	stalkie_big_nohaplotig	CDS	146422476	146422542	.	-	0	Parent=FBgn0038632.1.mrna1;Target=FBgn0038632.1 1 67 +
Chr2	gffcl	locus	146429527	146430022	.	-	.	ID=RLOC_00022490;geneIDs=comp77060_c0_seq1.path1;transcripts=comp77060_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146429527	146430022	.	-	.	ID=comp77060_c0_seq1.mrna1;geneID=comp77060_c0_seq1.path1;Name=comp77060_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=494;mismatches=2;indels=0;unknowns=0;Target=comp77060_c0_seq1 496 1 .;CDS_Target=comp77060_c0_seq1 168 1 .;locus=RLOC_00022490
Chr2	stalkie_big_nohaplotig	exon	146429527	146430022	99	-	.	Parent=comp77060_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146429855	146430022	.	-	0	Parent=comp77060_c0_seq1.mrna1
Chr2	gffcl	locus	146430397	146430900	.	+	.	ID=RLOC_00022491;geneIDs=comp144636_c1_seq1.path1;transcripts=comp144636_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146430397	146430900	.	+	.	ID=comp144636_c1_seq1.mrna1;geneID=comp144636_c1_seq1.path1;Name=comp144636_c1_seq1;Dir=indeterminatecoverage=74.1;identity=95.4;matches=481;mismatches=23;indels=0;unknowns=0;Target=comp144636_c1_seq1 504 1 .;CDS_Target=comp144636_c1_seq1 162 61 .;locus=RLOC_00022491
Chr2	stalkie_big_nohaplotig	exon	146430397	146430900	95	+	.	Parent=comp144636_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146430457	146430558	.	+	0	Parent=comp144636_c1_seq1.mrna1
Chr2	gffcl	locus	146437979	146444569	.	+	.	ID=RLOC_00022492;geneIDs=FBgn0263974.1.path1;transcripts=FBgn0263974.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146437979	146444569	.	+	.	ID=FBgn0263974.1.mrna1;geneID=FBgn0263974.1.path1;Name=FBgn0263974.1;Dir=sensecoverage=100.0;identity=99.4;matches=4293;mismatches=27;indels=0;unknowns=0;locus=RLOC_00022492
Chr2	stalkie_big_nohaplotig	exon	146437979	146440355	99	+	.	Parent=FBgn0263974.1.mrna1;Target=FBgn0263974.1 1 2377 +
Chr2	stalkie_big_nohaplotig	exon	146442155	146443002	99	+	.	Parent=FBgn0263974.1.mrna1;Target=FBgn0263974.1 2378 3225 +
Chr2	stalkie_big_nohaplotig	exon	146443397	146443849	99	+	.	Parent=FBgn0263974.1.mrna1;Target=FBgn0263974.1 3226 3678 +
Chr2	stalkie_big_nohaplotig	exon	146443928	146444569	98	+	.	Parent=FBgn0263974.1.mrna1;Target=FBgn0263974.1 3679 4320 +
Chr2	stalkie_big_nohaplotig	CDS	146437979	146440355	.	+	0	Parent=FBgn0263974.1.mrna1;Target=FBgn0263974.1 1 2377 +
Chr2	stalkie_big_nohaplotig	CDS	146442155	146443002	.	+	2	Parent=FBgn0263974.1.mrna1;Target=FBgn0263974.1 2378 3225 +
Chr2	stalkie_big_nohaplotig	CDS	146443397	146443849	.	+	0	Parent=FBgn0263974.1.mrna1;Target=FBgn0263974.1 3226 3678 +
Chr2	stalkie_big_nohaplotig	CDS	146443928	146444569	.	+	0	Parent=FBgn0263974.1.mrna1;Target=FBgn0263974.1 3679 4320 +
Chr2	gffcl	locus	146447314	147520141	.	-	.	ID=RLOC_00022493;geneIDs=comp81883_c0_seq1.path2;transcripts=comp81883_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	146447314	147520141	.	-	.	ID=comp81883_c0_seq1.mrna2;geneID=comp81883_c0_seq1.path2;Name=comp81883_c0_seq1;Dir=indeterminatecoverage=99.4;identity=96.1;matches=348;mismatches=0;indels=14;unknowns=0;Target=comp81883_c0_seq1 49 2 .;locus=RLOC_00022493
Chr2	stalkie_big_nohaplotig	exon	146447314	146447568	94	-	.	Parent=comp81883_c0_seq1.mrna2;Target=comp81883_c0_seq1 358 98 .
Chr2	stalkie_big_nohaplotig	exon	147520045	147520141	100	-	.	Parent=comp81883_c0_seq1.mrna2;Target=comp81883_c0_seq1 97 1 .
Chr2	stalkie_big_nohaplotig	CDS	147520093	147520140	.	-	0	Parent=comp81883_c0_seq1.mrna2
Chr2	gffcl	locus	146447314	147520141	.	+	.	ID=RLOC_00022494;geneIDs=comp81883_c0_seq1.path1;transcripts=comp81883_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146447314	147520141	.	+	.	ID=comp81883_c0_seq1.mrna1;geneID=comp81883_c0_seq1.path1;Name=comp81883_c0_seq1;Dir=indeterminatecoverage=99.4;identity=100.0;matches=358;mismatches=0;indels=0;unknowns=0;Target=comp81883_c0_seq1 49 5 .;locus=RLOC_00022494
Chr2	stalkie_big_nohaplotig	exon	146447314	146447409	100	+	.	Parent=comp81883_c0_seq1.mrna1;Target=comp81883_c0_seq1 98 3 .
Chr2	stalkie_big_nohaplotig	exon	147519880	147520141	100	+	.	Parent=comp81883_c0_seq1.mrna1;Target=comp81883_c0_seq1 360 99 .
Chr2	stalkie_big_nohaplotig	CDS	146447316	146447360	.	+	0	Parent=comp81883_c0_seq1.mrna1
Chr2	gffcl	locus	146448357	146449749	.	-	.	ID=RLOC_00022495;geneIDs=comp156457_c0_seq1.path1;transcripts=comp156457_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146448357	146449749	.	-	.	ID=comp156457_c0_seq1.mrna1;geneID=comp156457_c0_seq1.path1;Name=comp156457_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1381;mismatches=12;indels=1;unknowns=0;Target=comp156457_c0_seq1 1394 1 .;CDS_Target=comp156457_c0_seq1 614 453 .;locus=RLOC_00022495
Chr2	stalkie_big_nohaplotig	exon	146448357	146449749	99	-	.	Parent=comp156457_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146449137	146449298	.	-	0	Parent=comp156457_c0_seq1.mrna1
Chr2	gffcl	locus	146491450	146492496	.	-	.	ID=RLOC_00022496;geneIDs=FBgn0038630.1.path1;transcripts=FBgn0038630.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146491450	146492496	.	-	.	ID=FBgn0038630.1.mrna1;geneID=FBgn0038630.1.path1;Name=FBgn0038630.1;Dir=sensecoverage=100.0;identity=99.9;matches=953;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022496
Chr2	stalkie_big_nohaplotig	exon	146491450	146491492	100	-	.	Parent=FBgn0038630.1.mrna1;Target=FBgn0038630.1 912 954 +
Chr2	stalkie_big_nohaplotig	exon	146491586	146492496	99	-	.	Parent=FBgn0038630.1.mrna1;Target=FBgn0038630.1 1 911 +
Chr2	stalkie_big_nohaplotig	CDS	146491450	146491492	.	-	1	Parent=FBgn0038630.1.mrna1;Target=FBgn0038630.1 912 954 +
Chr2	stalkie_big_nohaplotig	CDS	146491586	146492496	.	-	0	Parent=FBgn0038630.1.mrna1;Target=FBgn0038630.1 1 911 +
Chr2	gffcl	locus	146499226	146502463	.	+	.	ID=RLOC_00022497;geneIDs=FBgn0038629.path1;transcripts=FBgn0038629.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146499226	146502463	.	+	.	ID=FBgn0038629.mrna1;geneID=FBgn0038629.path1;Name=FBgn0038629;Dir=sensecoverage=100.0;identity=98.8;matches=1580;mismatches=15;indels=4;unknowns=0;Target=FBgn0038629 3 194 +;locus=RLOC_00022497
Chr2	stalkie_big_nohaplotig	exon	146499226	146499900	99	+	.	Parent=FBgn0038629.mrna1;Target=FBgn0038629 1 676 +
Chr2	stalkie_big_nohaplotig	exon	146499962	146500167	98	+	.	Parent=FBgn0038629.mrna1;Target=FBgn0038629 677 882 +
Chr2	stalkie_big_nohaplotig	exon	146500829	146500971	99	+	.	Parent=FBgn0038629.mrna1;Target=FBgn0038629 883 1025 +
Chr2	stalkie_big_nohaplotig	exon	146501893	146502463	98	+	.	Parent=FBgn0038629.mrna1;Target=FBgn0038629 1026 1599 +
Chr2	stalkie_big_nohaplotig	CDS	146499228	146499418	.	+	0	Parent=FBgn0038629.mrna1
Chr2	gffcl	locus	146503787	146504163	.	-	.	ID=RLOC_00022498;geneIDs=comp84075_c0_seq1.path1;transcripts=comp84075_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146503787	146504163	.	-	.	ID=comp84075_c0_seq1.mrna1;geneID=comp84075_c0_seq1.path1;Name=comp84075_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.2;matches=359;mismatches=14;indels=4;unknowns=0;Target=comp84075_c0_seq1 373 1 .;CDS_Target=comp84075_c0_seq1 360 208 .;locus=RLOC_00022498
Chr2	stalkie_big_nohaplotig	exon	146503787	146504163	95	-	.	Parent=comp84075_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146503800	146503952	.	-	0	Parent=comp84075_c0_seq1.mrna1
Chr2	gffcl	locus	146508938	146564789	.	-	.	ID=RLOC_00022499;geneIDs=FBgn0038627.1.path1;transcripts=FBgn0038627.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146508938	146564789	.	-	.	ID=FBgn0038627.1.mrna1;geneID=FBgn0038627.1.path1;Name=FBgn0038627.1;Dir=sensecoverage=100.0;identity=99.5;matches=558;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022499
Chr2	stalkie_big_nohaplotig	exon	146508938	146509069	99	-	.	Parent=FBgn0038627.1.mrna1;Target=FBgn0038627.1 430 561 +
Chr2	stalkie_big_nohaplotig	exon	146509841	146510185	99	-	.	Parent=FBgn0038627.1.mrna1;Target=FBgn0038627.1 85 429 +
Chr2	stalkie_big_nohaplotig	exon	146556895	146556930	97	-	.	Parent=FBgn0038627.1.mrna1;Target=FBgn0038627.1 49 84 +
Chr2	stalkie_big_nohaplotig	exon	146564742	146564789	100	-	.	Parent=FBgn0038627.1.mrna1;Target=FBgn0038627.1 1 48 +
Chr2	stalkie_big_nohaplotig	CDS	146508938	146509069	.	-	0	Parent=FBgn0038627.1.mrna1;Target=FBgn0038627.1 430 561 +
Chr2	stalkie_big_nohaplotig	CDS	146509841	146510185	.	-	0	Parent=FBgn0038627.1.mrna1;Target=FBgn0038627.1 85 429 +
Chr2	stalkie_big_nohaplotig	CDS	146556895	146556930	.	-	0	Parent=FBgn0038627.1.mrna1;Target=FBgn0038627.1 49 84 +
Chr2	stalkie_big_nohaplotig	CDS	146564742	146564789	.	-	0	Parent=FBgn0038627.1.mrna1;Target=FBgn0038627.1 1 48 +
Chr2	gffcl	locus	146514226	146515062	.	-	.	ID=RLOC_00022500;geneIDs=comp159604_c0_seq1.path1;transcripts=comp159604_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146514226	146515062	.	-	.	ID=comp159604_c0_seq1.mrna1;geneID=comp159604_c0_seq1.path1;Name=comp159604_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.5;matches=818;mismatches=19;indels=38;unknowns=0;Target=comp159604_c0_seq1 875 1 .;CDS_Target=comp159604_c0_seq1 402 301 .;locus=RLOC_00022500
Chr2	stalkie_big_nohaplotig	exon	146514226	146515062	93	-	.	Parent=comp159604_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146514686	146514762	.	-	0	Parent=comp159604_c0_seq1.mrna1
Chr2	gffcl	locus	146515358	146516415	.	-	.	ID=RLOC_00022501;geneIDs=comp161859_c0_seq1.path1;transcripts=comp161859_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146515358	146516415	.	-	.	ID=comp161859_c0_seq1.mrna1;geneID=comp161859_c0_seq1.path1;Name=comp161859_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=1023;mismatches=33;indels=2;unknowns=0;Target=comp161859_c0_seq1 1056 1 .;CDS_Target=comp161859_c0_seq1 322 143 .;locus=RLOC_00022501
Chr2	stalkie_big_nohaplotig	exon	146515358	146516415	96	-	.	Parent=comp161859_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146516092	146516271	.	-	0	Parent=comp161859_c0_seq1.mrna1
Chr2	gffcl	locus	146517357	146518266	.	+	.	ID=RLOC_00022502;geneIDs=comp153016_c1_seq1.path1;transcripts=comp153016_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146517357	146518266	.	+	.	ID=comp153016_c1_seq1.mrna1;geneID=comp153016_c1_seq1.path1;Name=comp153016_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=904;mismatches=6;indels=0;unknowns=0;Target=comp153016_c1_seq1 910 1 .;CDS_Target=comp153016_c1_seq1 128 3 .;locus=RLOC_00022502
Chr2	stalkie_big_nohaplotig	exon	146517357	146518266	99	+	.	Parent=comp153016_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146517359	146517484	.	+	0	Parent=comp153016_c1_seq1.mrna1
Chr2	gffcl	locus	146542653	146543189	.	+	.	ID=RLOC_00022504;geneIDs=comp152114_c0_seq1.path1;transcripts=comp152114_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146542653	146543189	.	+	.	ID=comp152114_c0_seq1.mrna1;geneID=comp152114_c0_seq1.path1;Name=comp152114_c0_seq1;Dir=indeterminatecoverage=91.3;identity=90.7;matches=487;mismatches=4;indels=46;unknowns=0;Target=comp152114_c0_seq1 538 48 .;CDS_Target=comp152114_c0_seq1 189 49 .;locus=RLOC_00022504
Chr2	stalkie_big_nohaplotig	exon	146542653	146543189	90	+	.	Parent=comp152114_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146542654	146542794	.	+	0	Parent=comp152114_c0_seq1.mrna1
Chr2	gffcl	locus	146591212	146591882	.	-	.	ID=RLOC_00022505;geneIDs=comp161151_c0_seq1.path1;transcripts=comp161151_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146591212	146591882	.	-	.	ID=comp161151_c0_seq1.mrna1;geneID=comp161151_c0_seq1.path1;Name=comp161151_c0_seq1;Dir=indeterminatecoverage=74.3;identity=97.2;matches=656;mismatches=15;indels=4;unknowns=0;Target=comp161151_c0_seq1 909 235 .;CDS_Target=comp161151_c0_seq1 705 325 .;locus=RLOC_00022505
Chr2	stalkie_big_nohaplotig	exon	146591212	146591882	97	-	.	Parent=comp161151_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146591412	146591792	.	-	0	Parent=comp161151_c0_seq1.mrna1
Chr2	gffcl	locus	146620869	146621594	.	-	.	ID=RLOC_00022506;geneIDs=comp136022_c0_seq1.path1;transcripts=comp136022_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146620869	146621594	.	-	.	ID=comp136022_c0_seq1.mrna1;geneID=comp136022_c0_seq1.path1;Name=comp136022_c0_seq1;Dir=sensecoverage=99.0;identity=96.1;matches=548;mismatches=22;indels=0;unknowns=0;locus=RLOC_00022506
Chr2	stalkie_big_nohaplotig	exon	146620869	146621280	96	-	.	Parent=comp136022_c0_seq1.mrna1;Target=comp136022_c0_seq1 161 572 +
Chr2	stalkie_big_nohaplotig	exon	146621437	146621594	96	-	.	Parent=comp136022_c0_seq1.mrna1;Target=comp136022_c0_seq1 3 160 +
Chr2	stalkie_big_nohaplotig	CDS	146620939	146621280	.	-	0	Parent=comp136022_c0_seq1.mrna1;Target=comp136022_c0_seq1 161 502 +
Chr2	stalkie_big_nohaplotig	CDS	146621437	146621472	.	-	0	Parent=comp136022_c0_seq1.mrna1;Target=comp136022_c0_seq1 125 160 +
Chr2	gffcl	locus	146627643	146629977	.	+	.	ID=RLOC_00022507;geneIDs=FBgn0039591.1.path1;transcripts=FBgn0039591.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146627643	146629977	.	+	.	ID=FBgn0039591.1.mrna1;geneID=FBgn0039591.1.path1;Name=FBgn0039591.1;Dir=sensecoverage=100.0;identity=99.8;matches=2042;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022507
Chr2	stalkie_big_nohaplotig	exon	146627643	146628199	100	+	.	Parent=FBgn0039591.1.mrna1;Target=FBgn0039591.1 1 557 +
Chr2	stalkie_big_nohaplotig	exon	146628334	146628619	100	+	.	Parent=FBgn0039591.1.mrna1;Target=FBgn0039591.1 558 843 +
Chr2	stalkie_big_nohaplotig	exon	146628775	146629977	99	+	.	Parent=FBgn0039591.1.mrna1;Target=FBgn0039591.1 844 2046 +
Chr2	stalkie_big_nohaplotig	CDS	146627643	146628199	.	+	0	Parent=FBgn0039591.1.mrna1;Target=FBgn0039591.1 1 557 +
Chr2	stalkie_big_nohaplotig	CDS	146628334	146628619	.	+	1	Parent=FBgn0039591.1.mrna1;Target=FBgn0039591.1 558 843 +
Chr2	stalkie_big_nohaplotig	CDS	146628775	146629977	.	+	0	Parent=FBgn0039591.1.mrna1;Target=FBgn0039591.1 844 2046 +
Chr2	gffcl	locus	146635895	146636836	.	+	.	ID=RLOC_00022508;geneIDs=ORF2640.path1;transcripts=ORF2640.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146635895	146636836	.	+	.	ID=ORF2640.mrna1;geneID=ORF2640.path1;Name=ORF2640;Dir=sensecoverage=99.9;identity=99.0;matches=822;mismatches=8;indels=0;unknowns=0;locus=RLOC_00022508
Chr2	stalkie_big_nohaplotig	exon	146635895	146636437	98	+	.	Parent=ORF2640.mrna1;Target=ORF2640 1 543 +
Chr2	stalkie_big_nohaplotig	exon	146636494	146636680	98	+	.	Parent=ORF2640.mrna1;Target=ORF2640 544 730 +
Chr2	stalkie_big_nohaplotig	exon	146636737	146636836	100	+	.	Parent=ORF2640.mrna1;Target=ORF2640 731 830 +
Chr2	stalkie_big_nohaplotig	CDS	146635895	146636437	.	+	0	Parent=ORF2640.mrna1;Target=ORF2640 1 543 +
Chr2	stalkie_big_nohaplotig	CDS	146636494	146636680	.	+	0	Parent=ORF2640.mrna1;Target=ORF2640 544 730 +
Chr2	stalkie_big_nohaplotig	CDS	146636737	146636834	.	+	2	Parent=ORF2640.mrna1;Target=ORF2640 731 828 +
Chr2	gffcl	locus	146641877	146644982	.	+	.	ID=RLOC_00022509;geneIDs=comp160489_c0_seq1.path1;transcripts=comp160489_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146641877	146644982	.	+	.	ID=comp160489_c0_seq1.mrna1;geneID=comp160489_c0_seq1.path1;Name=comp160489_c0_seq1;Dir=antisensecoverage=98.7;identity=97.9;matches=2835;mismatches=58;indels=2;unknowns=0;locus=RLOC_00022509
Chr2	stalkie_big_nohaplotig	exon	146641877	146642015	97	+	.	Parent=comp160489_c0_seq1.mrna1;Target=comp160489_c0_seq1 2755 2893 -
Chr2	stalkie_big_nohaplotig	exon	146642125	146644012	96	+	.	Parent=comp160489_c0_seq1.mrna1;Target=comp160489_c0_seq1 869 2754 -
Chr2	stalkie_big_nohaplotig	exon	146644115	146644982	100	+	.	Parent=comp160489_c0_seq1.mrna1;Target=comp160489_c0_seq1 1 868 -
Chr2	stalkie_big_nohaplotig	CDS	146641980	146642015	.	+	0	Parent=comp160489_c0_seq1.mrna1;Target=comp160489_c0_seq1 2755 2790 .
Chr2	stalkie_big_nohaplotig	CDS	146642125	146642625	.	+	0	Parent=comp160489_c0_seq1.mrna1;Target=comp160489_c0_seq1 2254 2754 .
Chr2	gffcl	locus	146676018	146676756	.	-	.	ID=RLOC_00022510;geneIDs=comp157427_c0_seq1.path1;transcripts=comp157427_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146676018	146676756	.	-	.	ID=comp157427_c0_seq1.mrna1;geneID=comp157427_c0_seq1.path1;Name=comp157427_c0_seq1;Dir=sensecoverage=94.3;identity=99.0;matches=670;mismatches=6;indels=1;unknowns=0;locus=RLOC_00022510
Chr2	stalkie_big_nohaplotig	exon	146676018	146676561	99	-	.	Parent=comp157427_c0_seq1.mrna1;Target=comp157427_c0_seq1 155 698 +
Chr2	stalkie_big_nohaplotig	exon	146676625	146676756	98	-	.	Parent=comp157427_c0_seq1.mrna1;Target=comp157427_c0_seq1 22 154 +
Chr2	stalkie_big_nohaplotig	CDS	146676163	146676561	.	-	0	Parent=comp157427_c0_seq1.mrna1;Target=comp157427_c0_seq1 155 553 +
Chr2	stalkie_big_nohaplotig	CDS	146676625	146676660	.	-	0	Parent=comp157427_c0_seq1.mrna1;Target=comp157427_c0_seq1 119 154 +
Chr2	gffcl	locus	146688173	146688991	.	+	.	ID=RLOC_00022511;geneIDs=comp152333_c0_seq1.path1;transcripts=comp152333_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146688173	146688991	.	+	.	ID=comp152333_c0_seq1.mrna1;geneID=comp152333_c0_seq1.path1;Name=comp152333_c0_seq1;Dir=indeterminatecoverage=98.9;identity=97.1;matches=795;mismatches=7;indels=17;unknowns=0;Target=comp152333_c0_seq1 802 1 .;CDS_Target=comp152333_c0_seq1 488 375 .;locus=RLOC_00022511
Chr2	stalkie_big_nohaplotig	exon	146688173	146688991	97	+	.	Parent=comp152333_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146688547	146688660	.	+	0	Parent=comp152333_c0_seq1.mrna1
Chr2	gffcl	locus	146699484	146699888	.	-	.	ID=RLOC_00022512;geneIDs=FBgn0031830.2.path1;transcripts=FBgn0031830.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146699484	146699888	.	-	.	ID=FBgn0031830.2.mrna1;geneID=FBgn0031830.2.path1;Name=FBgn0031830.2;Dir=indeterminatecoverage=100.0;identity=99.0;matches=401;mismatches=4;indels=0;unknowns=0;Target=FBgn0031830.2 405 1 .;locus=RLOC_00022512
Chr2	stalkie_big_nohaplotig	exon	146699484	146699888	99	-	.	Parent=FBgn0031830.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146699484	146699888	.	-	0	Parent=FBgn0031830.2.mrna1
Chr2	gffcl	locus	146701560	146702349	.	+	.	ID=RLOC_00022513;geneIDs=comp153330_c0_seq1.path1;transcripts=comp153330_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146701560	146702349	.	+	.	ID=comp153330_c0_seq1.mrna1;geneID=comp153330_c0_seq1.path1;Name=comp153330_c0_seq1;Dir=antisensecoverage=99.7;identity=98.7;matches=658;mismatches=9;indels=0;unknowns=0;locus=RLOC_00022513
Chr2	stalkie_big_nohaplotig	exon	146701560	146701674	98	+	.	Parent=comp153330_c0_seq1.mrna1;Target=comp153330_c0_seq1 555 669 -
Chr2	stalkie_big_nohaplotig	exon	146701798	146702349	98	+	.	Parent=comp153330_c0_seq1.mrna1;Target=comp153330_c0_seq1 3 554 -
Chr2	stalkie_big_nohaplotig	CDS	146701639	146701674	.	+	0	Parent=comp153330_c0_seq1.mrna1;Target=comp153330_c0_seq1 555 590 .
Chr2	stalkie_big_nohaplotig	CDS	146701798	146702232	.	+	0	Parent=comp153330_c0_seq1.mrna1;Target=comp153330_c0_seq1 120 554 .
Chr2	gffcl	locus	146707090	146708149	.	+	.	ID=RLOC_00022514;geneIDs=FBgn0038626.2.path1;transcripts=FBgn0038626.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146707090	146708149	.	+	.	ID=FBgn0038626.2.mrna1;geneID=FBgn0038626.2.path1;Name=FBgn0038626.2;Dir=sensecoverage=100.0;identity=99.0;matches=858;mismatches=9;indels=0;unknowns=0;locus=RLOC_00022514
Chr2	stalkie_big_nohaplotig	exon	146707090	146707171	98	+	.	Parent=FBgn0038626.2.mrna1;Target=FBgn0038626.2 1 82 +
Chr2	stalkie_big_nohaplotig	exon	146707235	146707385	99	+	.	Parent=FBgn0038626.2.mrna1;Target=FBgn0038626.2 83 233 +
Chr2	stalkie_big_nohaplotig	exon	146707445	146707903	98	+	.	Parent=FBgn0038626.2.mrna1;Target=FBgn0038626.2 234 692 +
Chr2	stalkie_big_nohaplotig	exon	146707975	146708149	98	+	.	Parent=FBgn0038626.2.mrna1;Target=FBgn0038626.2 693 867 +
Chr2	stalkie_big_nohaplotig	CDS	146707090	146707171	.	+	0	Parent=FBgn0038626.2.mrna1;Target=FBgn0038626.2 1 82 +
Chr2	stalkie_big_nohaplotig	CDS	146707235	146707385	.	+	2	Parent=FBgn0038626.2.mrna1;Target=FBgn0038626.2 83 233 +
Chr2	stalkie_big_nohaplotig	CDS	146707445	146707903	.	+	1	Parent=FBgn0038626.2.mrna1;Target=FBgn0038626.2 234 692 +
Chr2	stalkie_big_nohaplotig	CDS	146707975	146708149	.	+	1	Parent=FBgn0038626.2.mrna1;Target=FBgn0038626.2 693 867 +
Chr2	gffcl	locus	146739238	146741029	.	+	.	ID=RLOC_00022515;geneIDs=comp161382_c3_seq1.path1;transcripts=comp161382_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146739238	146741029	.	+	.	ID=comp161382_c3_seq1.mrna1;geneID=comp161382_c3_seq1.path1;Name=comp161382_c3_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=1778;mismatches=14;indels=11;unknowns=0;Target=comp161382_c3_seq1 1803 1 .;CDS_Target=comp161382_c3_seq1 355 101 .;locus=RLOC_00022515
Chr2	stalkie_big_nohaplotig	exon	146739238	146741029	98	+	.	Parent=comp161382_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146739338	146739581	.	+	0	Parent=comp161382_c3_seq1.mrna1
Chr2	gffcl	locus	146778111	146778532	.	-	.	ID=RLOC_00022516;geneIDs=comp152755_c0_seq1.path1;transcripts=comp152755_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146778111	146778532	.	-	.	ID=comp152755_c0_seq1.mrna1;geneID=comp152755_c0_seq1.path1;Name=comp152755_c0_seq1;Dir=sensecoverage=94.1;identity=90.7;matches=304;mismatches=13;indels=18;unknowns=0;locus=RLOC_00022516
Chr2	stalkie_big_nohaplotig	exon	146778111	146778288	87	-	.	Parent=comp152755_c0_seq1.mrna1;Target=comp152755_c0_seq1 140 335 +
Chr2	stalkie_big_nohaplotig	exon	146778394	146778532	95	-	.	Parent=comp152755_c0_seq1.mrna1;Target=comp152755_c0_seq1 1 139 +
Chr2	stalkie_big_nohaplotig	CDS	146778215	146778288	.	-	2	Parent=comp152755_c0_seq1.mrna1;Target=comp152755_c0_seq1 140 213 +
Chr2	stalkie_big_nohaplotig	CDS	146778394	146778415	.	-	0	Parent=comp152755_c0_seq1.mrna1;Target=comp152755_c0_seq1 118 139 +
Chr2	gffcl	locus	146836136	146841352	.	-	.	ID=RLOC_00022518;geneIDs=comp151906_c0_seq1.path1;transcripts=comp151906_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146836136	146841352	.	-	.	ID=comp151906_c0_seq1.mrna1;geneID=comp151906_c0_seq1.path1;Name=comp151906_c0_seq1;Dir=sensecoverage=97.3;identity=98.8;matches=634;mismatches=8;indels=0;unknowns=0;locus=RLOC_00022518
Chr2	stalkie_big_nohaplotig	exon	146836136	146836637	98	-	.	Parent=comp151906_c0_seq1.mrna1;Target=comp151906_c0_seq1 157 658 +
Chr2	stalkie_big_nohaplotig	exon	146841149	146841181	100	-	.	Parent=comp151906_c0_seq1.mrna1;Target=comp151906_c0_seq1 124 156 +
Chr2	stalkie_big_nohaplotig	exon	146841246	146841352	98	-	.	Parent=comp151906_c0_seq1.mrna1;Target=comp151906_c0_seq1 17 123 +
Chr2	stalkie_big_nohaplotig	CDS	146836332	146836637	.	-	0	Parent=comp151906_c0_seq1.mrna1;Target=comp151906_c0_seq1 157 462 +
Chr2	stalkie_big_nohaplotig	CDS	146841149	146841181	.	-	0	Parent=comp151906_c0_seq1.mrna1;Target=comp151906_c0_seq1 124 156 +
Chr2	stalkie_big_nohaplotig	CDS	146841246	146841281	.	-	0	Parent=comp151906_c0_seq1.mrna1;Target=comp151906_c0_seq1 88 123 +
Chr2	gffcl	locus	146878563	146935002	.	+	.	ID=RLOC_00022519;geneIDs=FBgn0004652.1.path1;transcripts=FBgn0004652.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146878563	146935002	.	+	.	ID=FBgn0004652.1.mrna1;geneID=FBgn0004652.1.path1;Name=FBgn0004652.1;Dir=sensecoverage=100.0;identity=99.6;matches=2035;mismatches=2;indels=6;unknowns=0;locus=RLOC_00022519
Chr2	stalkie_big_nohaplotig	exon	146878563	146878630	100	+	.	Parent=FBgn0004652.1.mrna1;Target=FBgn0004652.1 1 68 +
Chr2	stalkie_big_nohaplotig	exon	146904381	146904528	100	+	.	Parent=FBgn0004652.1.mrna1;Target=FBgn0004652.1 69 216 +
Chr2	stalkie_big_nohaplotig	exon	146906056	146906256	100	+	.	Parent=FBgn0004652.1.mrna1;Target=FBgn0004652.1 217 417 +
Chr2	stalkie_big_nohaplotig	exon	146906316	146907011	99	+	.	Parent=FBgn0004652.1.mrna1;Target=FBgn0004652.1 418 1113 +
Chr2	stalkie_big_nohaplotig	exon	146910781	146911044	100	+	.	Parent=FBgn0004652.1.mrna1;Target=FBgn0004652.1 1114 1377 +
Chr2	stalkie_big_nohaplotig	exon	146917408	146917540	100	+	.	Parent=FBgn0004652.1.mrna1;Target=FBgn0004652.1 1378 1510 +
Chr2	stalkie_big_nohaplotig	exon	146934470	146935002	98	+	.	Parent=FBgn0004652.1.mrna1;Target=FBgn0004652.1 1511 2037 +
Chr2	stalkie_big_nohaplotig	CDS	146878563	146878630	.	+	0	Parent=FBgn0004652.1.mrna1;Target=FBgn0004652.1 1 68 +
Chr2	stalkie_big_nohaplotig	CDS	146904381	146904528	.	+	1	Parent=FBgn0004652.1.mrna1;Target=FBgn0004652.1 69 216 +
Chr2	stalkie_big_nohaplotig	CDS	146906056	146906256	.	+	0	Parent=FBgn0004652.1.mrna1;Target=FBgn0004652.1 217 417 +
Chr2	stalkie_big_nohaplotig	CDS	146906316	146907011	.	+	0	Parent=FBgn0004652.1.mrna1;Target=FBgn0004652.1 418 1113 +
Chr2	stalkie_big_nohaplotig	CDS	146910781	146911044	.	+	0	Parent=FBgn0004652.1.mrna1;Target=FBgn0004652.1 1114 1377 +
Chr2	stalkie_big_nohaplotig	CDS	146917408	146917540	.	+	0	Parent=FBgn0004652.1.mrna1;Target=FBgn0004652.1 1378 1510 +
Chr2	stalkie_big_nohaplotig	CDS	146934470	146935002	.	+	2	Parent=FBgn0004652.1.mrna1;Target=FBgn0004652.1 1511 2037 +
Chr2	gffcl	locus	146927959	146928627	.	+	.	ID=RLOC_00022520;geneIDs=comp156921_c0_seq1.path1;transcripts=comp156921_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146927959	146928627	.	+	.	ID=comp156921_c0_seq1.mrna1;geneID=comp156921_c0_seq1.path1;Name=comp156921_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.5;matches=640;mismatches=10;indels=20;unknowns=0;Target=comp156921_c0_seq1 651 1 .;CDS_Target=comp156921_c0_seq1 209 204 .;locus=RLOC_00022520
Chr2	stalkie_big_nohaplotig	exon	146927959	146928627	95	+	.	Parent=comp156921_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146928162	146928167	.	+	0	Parent=comp156921_c0_seq1.mrna1
Chr2	gffcl	locus	146928720	146929490	.	+	.	ID=RLOC_00022521;geneIDs=comp161330_c0_seq1.path1;transcripts=comp161330_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146928720	146929490	.	+	.	ID=comp161330_c0_seq1.mrna1;geneID=comp161330_c0_seq1.path1;Name=comp161330_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.8;matches=754;mismatches=9;indels=32;unknowns=0;Target=comp161330_c0_seq1 787 1 .;CDS_Target=comp161330_c0_seq1 260 174 .;locus=RLOC_00022521
Chr2	stalkie_big_nohaplotig	exon	146928720	146929490	94	+	.	Parent=comp161330_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146928893	146928979	.	+	0	Parent=comp161330_c0_seq1.mrna1
Chr2	gffcl	locus	146930395	146930751	.	+	.	ID=RLOC_00022522;geneIDs=comp146516_c0_seq1.path1;transcripts=comp146516_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146930395	146930751	.	+	.	ID=comp146516_c0_seq1.mrna1;geneID=comp146516_c0_seq1.path1;Name=comp146516_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=357;mismatches=0;indels=5;unknowns=0;Target=comp146516_c0_seq1 362 1 .;CDS_Target=comp146516_c0_seq1 36 1 .;locus=RLOC_00022522
Chr2	stalkie_big_nohaplotig	exon	146930395	146930751	98	+	.	Parent=comp146516_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146930395	146930430	.	+	0	Parent=comp146516_c0_seq1.mrna1
Chr2	gffcl	locus	146946620	147038322	.	.	.	ID=RLOC_00022523;geneIDs=FBgn0262125.1.path1,comp161847_c2_seq1.path1,comp163064_c0_seq1.path1;transcripts=comp161847_c2_seq1.mrna1,FBgn0262125.1.mrna1,comp163064_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146946620	147038322	.	-	.	ID=comp161847_c2_seq1.mrna1;geneID=comp161847_c2_seq1.path1;Name=comp161847_c2_seq1;Dir=indeterminatecoverage=80.1;identity=92.2;matches=747;mismatches=29;indels=34;unknowns=0;locus=RLOC_00022523
Chr2	stalkie_big_nohaplotig	exon	146946620	146947258	97	-	.	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 1086 448 .
Chr2	stalkie_big_nohaplotig	exon	146959086	146959089	100	-	.	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 447 444 .
Chr2	stalkie_big_nohaplotig	exon	146967360	146967401	47	-	.	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 378 307 .
Chr2	stalkie_big_nohaplotig	exon	146978682	146978692	81	-	.	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 306 298 .
Chr2	stalkie_big_nohaplotig	exon	146979848	146979855	100	-	.	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 297 290 .
Chr2	stalkie_big_nohaplotig	exon	146980567	146980571	80	-	.	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 289 285 .
Chr2	stalkie_big_nohaplotig	exon	146980635	146980640	100	-	.	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 284 279 .
Chr2	stalkie_big_nohaplotig	exon	146981853	146981856	100	-	.	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 278 275 .
Chr2	stalkie_big_nohaplotig	exon	146996209	146996222	78	-	.	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 274 263 .
Chr2	stalkie_big_nohaplotig	exon	147002444	147002446	100	-	.	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 262 260 .
Chr2	stalkie_big_nohaplotig	exon	147013629	147013636	87	-	.	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 259 252 .
Chr2	stalkie_big_nohaplotig	exon	147027257	147027262	100	-	.	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 251 246 .
Chr2	stalkie_big_nohaplotig	exon	147033604	147033609	100	-	.	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 245 240 .
Chr2	stalkie_big_nohaplotig	exon	147037298	147037307	100	-	.	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 239 230 .
Chr2	stalkie_big_nohaplotig	exon	147038310	147038322	92	-	.	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 229 217 .
Chr2	stalkie_big_nohaplotig	CDS	146967371	146967401	.	-	0	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 364 307 .
Chr2	stalkie_big_nohaplotig	CDS	146978682	146978692	.	-	2	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 306 298 .
Chr2	stalkie_big_nohaplotig	CDS	146979848	146979855	.	-	1	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 297 290 .
Chr2	stalkie_big_nohaplotig	CDS	146980567	146980571	.	-	0	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 289 285 .
Chr2	stalkie_big_nohaplotig	CDS	146980635	146980640	.	-	0	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 284 279 .
Chr2	stalkie_big_nohaplotig	CDS	146981853	146981856	.	-	1	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 278 275 .
Chr2	stalkie_big_nohaplotig	CDS	146996209	146996222	.	-	0	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 274 263 .
Chr2	stalkie_big_nohaplotig	CDS	147002444	147002446	.	-	0	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 262 260 .
Chr2	stalkie_big_nohaplotig	CDS	147013629	147013636	.	-	2	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 259 252 .
Chr2	stalkie_big_nohaplotig	CDS	147027257	147027262	.	-	2	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 251 246 .
Chr2	stalkie_big_nohaplotig	CDS	147033604	147033609	.	-	2	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 245 240 .
Chr2	stalkie_big_nohaplotig	CDS	147037298	147037307	.	-	0	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 239 230 .
Chr2	stalkie_big_nohaplotig	CDS	147038310	147038321	.	-	0	Parent=comp161847_c2_seq1.mrna1;Target=comp161847_c2_seq1 229 218 .
Chr2	stalkie_big_nohaplotig	mRNA	146964608	146969664	.	-	.	ID=FBgn0262125.1.mrna1;geneID=FBgn0262125.1.path1;Name=FBgn0262125.1;Dir=sensecoverage=100.0;identity=99.5;matches=2375;mismatches=13;indels=0;unknowns=0;locus=RLOC_00022523
Chr2	stalkie_big_nohaplotig	exon	146964608	146964694	100	-	.	Parent=FBgn0262125.1.mrna1;Target=FBgn0262125.1 2302 2388 +
Chr2	stalkie_big_nohaplotig	exon	146967007	146967027	100	-	.	Parent=FBgn0262125.1.mrna1;Target=FBgn0262125.1 2281 2301 +
Chr2	stalkie_big_nohaplotig	exon	146967197	146967745	99	-	.	Parent=FBgn0262125.1.mrna1;Target=FBgn0262125.1 1732 2280 +
Chr2	stalkie_big_nohaplotig	exon	146967813	146967966	99	-	.	Parent=FBgn0262125.1.mrna1;Target=FBgn0262125.1 1578 1731 +
Chr2	stalkie_big_nohaplotig	exon	146968031	146969298	99	-	.	Parent=FBgn0262125.1.mrna1;Target=FBgn0262125.1 310 1577 +
Chr2	stalkie_big_nohaplotig	exon	146969356	146969664	99	-	.	Parent=FBgn0262125.1.mrna1;Target=FBgn0262125.1 1 309 +
Chr2	stalkie_big_nohaplotig	CDS	146964608	146964694	.	-	0	Parent=FBgn0262125.1.mrna1;Target=FBgn0262125.1 2302 2388 +
Chr2	stalkie_big_nohaplotig	CDS	146967007	146967027	.	-	0	Parent=FBgn0262125.1.mrna1;Target=FBgn0262125.1 2281 2301 +
Chr2	stalkie_big_nohaplotig	CDS	146967197	146967745	.	-	0	Parent=FBgn0262125.1.mrna1;Target=FBgn0262125.1 1732 2280 +
Chr2	stalkie_big_nohaplotig	CDS	146967813	146967966	.	-	1	Parent=FBgn0262125.1.mrna1;Target=FBgn0262125.1 1578 1731 +
Chr2	stalkie_big_nohaplotig	CDS	146968031	146969298	.	-	0	Parent=FBgn0262125.1.mrna1;Target=FBgn0262125.1 310 1577 +
Chr2	stalkie_big_nohaplotig	CDS	146969356	146969664	.	-	0	Parent=FBgn0262125.1.mrna1;Target=FBgn0262125.1 1 309 +
Chr2	stalkie_big_nohaplotig	mRNA	146964674	146965941	.	+	.	ID=comp163064_c0_seq1.mrna1;geneID=comp163064_c0_seq1.path1;Name=comp163064_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.2;matches=1222;mismatches=46;indels=58;unknowns=0;Target=comp163064_c0_seq1 1326 1 .;CDS_Target=comp163064_c0_seq1 560 507 .;locus=RLOC_00022523
Chr2	stalkie_big_nohaplotig	exon	146964674	146965941	92	+	.	Parent=comp163064_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146965174	146965227	.	+	0	Parent=comp163064_c0_seq1.mrna1
Chr2	gffcl	locus	146948770	147189229	.	+	.	ID=RLOC_00022524;geneIDs=FBgn0026239.1.path1,comp163388_c1_seq1.path1;transcripts=FBgn0026239.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146948770	147189229	.	+	.	ID=FBgn0026239.1.mrna1;geneID=FBgn0026239.1.path1;Name=FBgn0026239.1;Dir=sensecoverage=94.3;identity=98.6;matches=3349;mismatches=21;indels=27;unknowns=0;locus=RLOC_00022524
Chr2	stalkie_big_nohaplotig	exon	146948770	146948775	100	+	.	Parent=FBgn0026239.1.mrna1;Target=FBgn0026239.1 221 226 +
Chr2	stalkie_big_nohaplotig	exon	146950533	146950540	100	+	.	Parent=FBgn0026239.1.mrna1;Target=FBgn0026239.1 232 239 +
Chr2	stalkie_big_nohaplotig	exon	146952386	146952396	90	+	.	Parent=FBgn0026239.1.mrna1;Target=FBgn0026239.1 240 250 +
Chr2	stalkie_big_nohaplotig	exon	146952911	146952922	75	+	.	Parent=FBgn0026239.1.mrna1;Target=FBgn0026239.1 251 262 +
Chr2	stalkie_big_nohaplotig	exon	146957173	146957174	100	+	.	Parent=FBgn0026239.1.mrna1;Target=FBgn0026239.1 263 264 +
Chr2	stalkie_big_nohaplotig	exon	147120605	147120606	100	+	.	Parent=FBgn0026239.1.mrna1;Target=FBgn0026239.1 420 421 +
Chr2	stalkie_big_nohaplotig	exon	147125446	147125456	100	+	.	Parent=FBgn0026239.1.mrna1;Target=FBgn0026239.1 422 432 +
Chr2	stalkie_big_nohaplotig	exon	147131088	147131090	100	+	.	Parent=FBgn0026239.1.mrna1;Target=FBgn0026239.1 735 737 +
Chr2	stalkie_big_nohaplotig	exon	147138578	147138580	100	+	.	Parent=FBgn0026239.1.mrna1;Target=FBgn0026239.1 738 740 +
Chr2	stalkie_big_nohaplotig	exon	147143014	147143029	36	+	.	Parent=FBgn0026239.1.mrna1;Target=FBgn0026239.1 741 776 +
Chr2	stalkie_big_nohaplotig	exon	147158083	147158096	85	+	.	Parent=FBgn0026239.1.mrna1;Target=FBgn0026239.1 777 790 +
Chr2	stalkie_big_nohaplotig	exon	147163977	147163981	83	+	.	Parent=FBgn0026239.1.mrna1;Target=FBgn0026239.1 791 796 +
Chr2	stalkie_big_nohaplotig	exon	147166204	147166544	99	+	.	Parent=FBgn0026239.1.mrna1;Target=FBgn0026239.1 797 1137 +
Chr2	stalkie_big_nohaplotig	exon	147172754	147173061	99	+	.	Parent=FBgn0026239.1.mrna1;Target=FBgn0026239.1 1138 1445 +
Chr2	stalkie_big_nohaplotig	exon	147183123	147183350	99	+	.	Parent=FBgn0026239.1.mrna1;Target=FBgn0026239.1 1446 1673 +
Chr2	stalkie_big_nohaplotig	exon	147186826	147189229	99	+	.	Parent=FBgn0026239.1.mrna1;Target=FBgn0026239.1 1674 4071 +
Chr2	stalkie_big_nohaplotig	CDS	147166386	147166544	.	+	0	Parent=FBgn0026239.1.mrna1;Target=FBgn0026239.1 979 1137 +
Chr2	stalkie_big_nohaplotig	CDS	147172754	147173061	.	+	0	Parent=FBgn0026239.1.mrna1;Target=FBgn0026239.1 1138 1445 +
Chr2	stalkie_big_nohaplotig	CDS	147183123	147183350	.	+	1	Parent=FBgn0026239.1.mrna1;Target=FBgn0026239.1 1446 1673 +
Chr2	stalkie_big_nohaplotig	CDS	147186826	147189229	.	+	1	Parent=FBgn0026239.1.mrna1;Target=FBgn0026239.1 1674 4071 +
Chr2	gffcl	locus	146959085	146963918	.	+	.	ID=RLOC_00022525;geneIDs=FBgn0037358.1.path1;transcripts=FBgn0037358.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146959085	146963918	.	+	.	ID=FBgn0037358.1.mrna1;geneID=FBgn0037358.1.path1;Name=FBgn0037358.1;Dir=sensecoverage=100.0;identity=99.0;matches=567;mismatches=6;indels=0;unknowns=0;locus=RLOC_00022525
Chr2	stalkie_big_nohaplotig	exon	146959085	146959157	98	+	.	Parent=FBgn0037358.1.mrna1;Target=FBgn0037358.1 1 73 +
Chr2	stalkie_big_nohaplotig	exon	146962248	146962511	98	+	.	Parent=FBgn0037358.1.mrna1;Target=FBgn0037358.1 74 337 +
Chr2	stalkie_big_nohaplotig	exon	146963683	146963918	99	+	.	Parent=FBgn0037358.1.mrna1;Target=FBgn0037358.1 338 573 +
Chr2	stalkie_big_nohaplotig	CDS	146959085	146959157	.	+	0	Parent=FBgn0037358.1.mrna1;Target=FBgn0037358.1 1 73 +
Chr2	stalkie_big_nohaplotig	CDS	146962248	146962511	.	+	2	Parent=FBgn0037358.1.mrna1;Target=FBgn0037358.1 74 337 +
Chr2	stalkie_big_nohaplotig	CDS	146963683	146963918	.	+	2	Parent=FBgn0037358.1.mrna1;Target=FBgn0037358.1 338 573 +
Chr2	gffcl	locus	146971088	146990782	.	+	.	ID=RLOC_00022526;geneIDs=FBgn0027951.1.path1;transcripts=FBgn0027951.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146971088	146990782	.	+	.	ID=FBgn0027951.1.mrna1;geneID=FBgn0027951.1.path1;Name=FBgn0027951.1;Dir=sensecoverage=100.0;identity=99.6;matches=2484;mismatches=9;indels=0;unknowns=0;locus=RLOC_00022526
Chr2	stalkie_big_nohaplotig	exon	146971088	146971163	100	+	.	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 1 76 +
Chr2	stalkie_big_nohaplotig	exon	146979753	146979914	100	+	.	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 77 238 +
Chr2	stalkie_big_nohaplotig	exon	146985844	146985951	99	+	.	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 239 346 +
Chr2	stalkie_big_nohaplotig	exon	146986292	146986515	100	+	.	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 347 570 +
Chr2	stalkie_big_nohaplotig	exon	146986719	146987039	99	+	.	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 571 891 +
Chr2	stalkie_big_nohaplotig	exon	146987097	146987285	100	+	.	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 892 1080 +
Chr2	stalkie_big_nohaplotig	exon	146987345	146987608	99	+	.	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 1081 1344 +
Chr2	stalkie_big_nohaplotig	exon	146989072	146989259	100	+	.	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 1345 1532 +
Chr2	stalkie_big_nohaplotig	exon	146989550	146989800	99	+	.	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 1533 1783 +
Chr2	stalkie_big_nohaplotig	exon	146989879	146990220	99	+	.	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 1784 2125 +
Chr2	stalkie_big_nohaplotig	exon	146990282	146990409	100	+	.	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 2126 2253 +
Chr2	stalkie_big_nohaplotig	exon	146990466	146990581	100	+	.	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 2254 2369 +
Chr2	stalkie_big_nohaplotig	exon	146990659	146990782	99	+	.	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 2370 2493 +
Chr2	stalkie_big_nohaplotig	CDS	146971088	146971163	.	+	0	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 1 76 +
Chr2	stalkie_big_nohaplotig	CDS	146979753	146979914	.	+	2	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 77 238 +
Chr2	stalkie_big_nohaplotig	CDS	146985844	146985951	.	+	2	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 239 346 +
Chr2	stalkie_big_nohaplotig	CDS	146986292	146986515	.	+	2	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 347 570 +
Chr2	stalkie_big_nohaplotig	CDS	146986719	146987039	.	+	0	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 571 891 +
Chr2	stalkie_big_nohaplotig	CDS	146987097	146987285	.	+	0	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 892 1080 +
Chr2	stalkie_big_nohaplotig	CDS	146987345	146987608	.	+	0	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 1081 1344 +
Chr2	stalkie_big_nohaplotig	CDS	146989072	146989259	.	+	0	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 1345 1532 +
Chr2	stalkie_big_nohaplotig	CDS	146989550	146989800	.	+	1	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 1533 1783 +
Chr2	stalkie_big_nohaplotig	CDS	146989879	146990220	.	+	2	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 1784 2125 +
Chr2	stalkie_big_nohaplotig	CDS	146990282	146990409	.	+	2	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 2126 2253 +
Chr2	stalkie_big_nohaplotig	CDS	146990466	146990581	.	+	0	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 2254 2369 +
Chr2	stalkie_big_nohaplotig	CDS	146990659	146990782	.	+	1	Parent=FBgn0027951.1.mrna1;Target=FBgn0027951.1 2370 2493 +
Chr2	stalkie_big_nohaplotig	mRNA	146982235	147054355	.	-	.	ID=comp143390_c1_seq1.mrna1;geneID=comp143390_c1_seq1.path1;Name=comp143390_c1_seq1;Dir=indeterminatecoverage=87.0;identity=97.0;matches=484;mismatches=6;indels=9;unknowns=0;locus=RLOC_00022527
Chr2	stalkie_big_nohaplotig	exon	146982235	146982652	97	-	.	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 563 155 .
Chr2	stalkie_big_nohaplotig	exon	146983471	146983475	100	-	.	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 154 150 .
Chr2	stalkie_big_nohaplotig	exon	146984585	146984586	100	-	.	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 149 148 .
Chr2	stalkie_big_nohaplotig	exon	146990945	146990952	62	-	.	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 147 140 .
Chr2	stalkie_big_nohaplotig	exon	146996947	146996951	100	-	.	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 139 135 .
Chr2	stalkie_big_nohaplotig	exon	147016447	147016448	100	-	.	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 134 133 .
Chr2	stalkie_big_nohaplotig	exon	147019995	147020003	100	-	.	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 132 124 .
Chr2	stalkie_big_nohaplotig	exon	147027237	147027242	100	-	.	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 123 118 .
Chr2	stalkie_big_nohaplotig	exon	147029064	147029065	100	-	.	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 117 116 .
Chr2	stalkie_big_nohaplotig	exon	147036541	147036544	100	-	.	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 115 112 .
Chr2	stalkie_big_nohaplotig	exon	147039933	147039937	100	-	.	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 111 107 .
Chr2	stalkie_big_nohaplotig	exon	147046299	147046306	100	-	.	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 106 99 .
Chr2	stalkie_big_nohaplotig	exon	147050996	147050997	100	-	.	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 98 97 .
Chr2	stalkie_big_nohaplotig	exon	147052289	147052297	100	-	.	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 96 88 .
Chr2	stalkie_big_nohaplotig	exon	147054342	147054355	85	-	.	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 87 74 .
Chr2	stalkie_big_nohaplotig	CDS	146982623	146982652	.	-	0	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 184 155 .
Chr2	stalkie_big_nohaplotig	CDS	146983471	146983475	.	-	2	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 154 150 .
Chr2	stalkie_big_nohaplotig	CDS	146984585	146984586	.	-	1	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 149 148 .
Chr2	stalkie_big_nohaplotig	CDS	146990945	146990952	.	-	0	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 147 140 .
Chr2	stalkie_big_nohaplotig	CDS	146996947	146996951	.	-	2	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 139 135 .
Chr2	stalkie_big_nohaplotig	CDS	147016447	147016448	.	-	1	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 134 133 .
Chr2	stalkie_big_nohaplotig	CDS	147019995	147020003	.	-	1	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 132 124 .
Chr2	stalkie_big_nohaplotig	CDS	147027237	147027242	.	-	1	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 123 118 .
Chr2	stalkie_big_nohaplotig	CDS	147029064	147029065	.	-	0	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 117 116 .
Chr2	stalkie_big_nohaplotig	CDS	147036541	147036544	.	-	1	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 115 112 .
Chr2	stalkie_big_nohaplotig	CDS	147039933	147039937	.	-	0	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 111 107 .
Chr2	stalkie_big_nohaplotig	CDS	147046299	147046306	.	-	2	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 106 99 .
Chr2	stalkie_big_nohaplotig	CDS	147050996	147050997	.	-	1	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 98 97 .
Chr2	stalkie_big_nohaplotig	CDS	147052289	147052297	.	-	1	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 96 88 .
Chr2	stalkie_big_nohaplotig	CDS	147054342	147054355	.	-	0	Parent=comp143390_c1_seq1.mrna1;Target=comp143390_c1_seq1 87 74 .
Chr2	gffcl	locus	146992608	146992896	.	+	.	ID=RLOC_00022528;geneIDs=comp155172_c0_seq1.path1;transcripts=comp155172_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146992608	146992896	.	+	.	ID=comp155172_c0_seq1.mrna1;geneID=comp155172_c0_seq1.path1;Name=comp155172_c0_seq1;Dir=indeterminatecoverage=94.2;identity=94.5;matches=277;mismatches=11;indels=5;unknowns=0;Target=comp155172_c0_seq1 292 1 .;CDS_Target=comp155172_c0_seq1 137 48 .;locus=RLOC_00022528
Chr2	stalkie_big_nohaplotig	exon	146992608	146992896	94	+	.	Parent=comp155172_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146992652	146992741	.	+	0	Parent=comp155172_c0_seq1.mrna1
Chr2	gffcl	locus	146997859	146999274	.	-	.	ID=RLOC_00022529;geneIDs=FBgn0037356.1.path1;transcripts=FBgn0037356.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	146997859	146999274	.	-	.	ID=FBgn0037356.1.mrna1;geneID=FBgn0037356.1.path1;Name=FBgn0037356.1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1403;mismatches=13;indels=0;unknowns=0;Target=FBgn0037356.1 1416 1 .;locus=RLOC_00022529
Chr2	stalkie_big_nohaplotig	exon	146997859	146999274	99	-	.	Parent=FBgn0037356.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	146997859	146999274	.	-	0	Parent=FBgn0037356.1.mrna1
Chr2	gffcl	locus	147001222	147005036	.	+	.	ID=RLOC_00022530;geneIDs=FBgn0039252.1.path1;transcripts=FBgn0039252.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147001222	147005036	.	+	.	ID=FBgn0039252.1.mrna1;geneID=FBgn0039252.1.path1;Name=FBgn0039252.1;Dir=sensecoverage=100.0;identity=99.4;matches=2163;mismatches=12;indels=0;unknowns=0;locus=RLOC_00022530
Chr2	stalkie_big_nohaplotig	exon	147001222	147001319	98	+	.	Parent=FBgn0039252.1.mrna1;Target=FBgn0039252.1 1 98 +
Chr2	stalkie_big_nohaplotig	exon	147001382	147002217	99	+	.	Parent=FBgn0039252.1.mrna1;Target=FBgn0039252.1 99 934 +
Chr2	stalkie_big_nohaplotig	exon	147003796	147005036	99	+	.	Parent=FBgn0039252.1.mrna1;Target=FBgn0039252.1 935 2175 +
Chr2	stalkie_big_nohaplotig	CDS	147001222	147001319	.	+	0	Parent=FBgn0039252.1.mrna1;Target=FBgn0039252.1 1 98 +
Chr2	stalkie_big_nohaplotig	CDS	147001382	147002217	.	+	1	Parent=FBgn0039252.1.mrna1;Target=FBgn0039252.1 99 934 +
Chr2	stalkie_big_nohaplotig	CDS	147003796	147005036	.	+	2	Parent=FBgn0039252.1.mrna1;Target=FBgn0039252.1 935 2175 +
Chr2	gffcl	locus	147007268	147012579	.	-	.	ID=RLOC_00022531;geneIDs=FBgn0020626.1.path1;transcripts=FBgn0020626.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147007268	147012579	.	-	.	ID=FBgn0020626.1.mrna1;geneID=FBgn0020626.1.path1;Name=FBgn0020626.1;Dir=sensecoverage=100.0;identity=99.6;matches=1990;mismatches=7;indels=1;unknowns=0;locus=RLOC_00022531
Chr2	stalkie_big_nohaplotig	exon	147007268	147007827	99	-	.	Parent=FBgn0020626.1.mrna1;Target=FBgn0020626.1 1438 1998 +
Chr2	stalkie_big_nohaplotig	exon	147011143	147012579	99	-	.	Parent=FBgn0020626.1.mrna1;Target=FBgn0020626.1 1 1437 +
Chr2	stalkie_big_nohaplotig	CDS	147007268	147007827	.	-	0	Parent=FBgn0020626.1.mrna1;Target=FBgn0020626.1 1438 1998 +
Chr2	stalkie_big_nohaplotig	CDS	147011143	147012579	.	-	0	Parent=FBgn0020626.1.mrna1;Target=FBgn0020626.1 1 1437 +
Chr2	gffcl	locus	147016780	147017121	.	+	.	ID=RLOC_00022532;geneIDs=comp114276_c0_seq1.path1;transcripts=comp114276_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147016780	147017121	.	+	.	ID=comp114276_c0_seq1.mrna1;geneID=comp114276_c0_seq1.path1;Name=comp114276_c0_seq1;Dir=indeterminatecoverage=92.2;identity=100.0;matches=342;mismatches=0;indels=0;unknowns=0;Target=comp114276_c0_seq1 342 1 .;CDS_Target=comp114276_c0_seq1 213 148 .;locus=RLOC_00022532
Chr2	stalkie_big_nohaplotig	exon	147016780	147017121	100	+	.	Parent=comp114276_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147016927	147016992	.	+	0	Parent=comp114276_c0_seq1.mrna1
Chr2	gffcl	locus	147017327	147017903	.	-	.	ID=RLOC_00022533;geneIDs=comp135228_c0_seq1.path1;transcripts=comp135228_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147017327	147017903	.	-	.	ID=comp135228_c0_seq1.mrna1;geneID=comp135228_c0_seq1.path1;Name=comp135228_c0_seq1;Dir=indeterminatecoverage=94.4;identity=99.8;matches=576;mismatches=1;indels=0;unknowns=0;Target=comp135228_c0_seq1 611 35 .;CDS_Target=comp135228_c0_seq1 206 36 .;locus=RLOC_00022533
Chr2	stalkie_big_nohaplotig	exon	147017327	147017903	99	-	.	Parent=comp135228_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147017732	147017902	.	-	0	Parent=comp135228_c0_seq1.mrna1
Chr2	gffcl	locus	147029648	147033710	.	+	.	ID=RLOC_00022534;geneIDs=FBgn0039254.1.path1;transcripts=FBgn0039254.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147029648	147033710	.	+	.	ID=FBgn0039254.1.mrna1;geneID=FBgn0039254.1.path1;Name=FBgn0039254.1;Dir=sensecoverage=100.0;identity=100.0;matches=1320;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022534
Chr2	stalkie_big_nohaplotig	exon	147029648	147029803	100	+	.	Parent=FBgn0039254.1.mrna1;Target=FBgn0039254.1 1 156 +
Chr2	stalkie_big_nohaplotig	exon	147029869	147029995	100	+	.	Parent=FBgn0039254.1.mrna1;Target=FBgn0039254.1 157 283 +
Chr2	stalkie_big_nohaplotig	exon	147030061	147030449	100	+	.	Parent=FBgn0039254.1.mrna1;Target=FBgn0039254.1 284 672 +
Chr2	stalkie_big_nohaplotig	exon	147030506	147030607	100	+	.	Parent=FBgn0039254.1.mrna1;Target=FBgn0039254.1 673 774 +
Chr2	stalkie_big_nohaplotig	exon	147030666	147030817	100	+	.	Parent=FBgn0039254.1.mrna1;Target=FBgn0039254.1 775 926 +
Chr2	stalkie_big_nohaplotig	exon	147032037	147032388	100	+	.	Parent=FBgn0039254.1.mrna1;Target=FBgn0039254.1 927 1278 +
Chr2	stalkie_big_nohaplotig	exon	147033669	147033710	100	+	.	Parent=FBgn0039254.1.mrna1;Target=FBgn0039254.1 1279 1320 +
Chr2	stalkie_big_nohaplotig	CDS	147029648	147029803	.	+	0	Parent=FBgn0039254.1.mrna1;Target=FBgn0039254.1 1 156 +
Chr2	stalkie_big_nohaplotig	CDS	147029869	147029995	.	+	0	Parent=FBgn0039254.1.mrna1;Target=FBgn0039254.1 157 283 +
Chr2	stalkie_big_nohaplotig	CDS	147030061	147030449	.	+	2	Parent=FBgn0039254.1.mrna1;Target=FBgn0039254.1 284 672 +
Chr2	stalkie_big_nohaplotig	CDS	147030506	147030607	.	+	0	Parent=FBgn0039254.1.mrna1;Target=FBgn0039254.1 673 774 +
Chr2	stalkie_big_nohaplotig	CDS	147030666	147030817	.	+	0	Parent=FBgn0039254.1.mrna1;Target=FBgn0039254.1 775 926 +
Chr2	stalkie_big_nohaplotig	CDS	147032037	147032388	.	+	1	Parent=FBgn0039254.1.mrna1;Target=FBgn0039254.1 927 1278 +
Chr2	stalkie_big_nohaplotig	CDS	147033669	147033710	.	+	0	Parent=FBgn0039254.1.mrna1;Target=FBgn0039254.1 1279 1320 +
Chr2	gffcl	locus	147032790	147033278	.	-	.	ID=RLOC_00022535;geneIDs=comp153974_c0_seq1.path1;transcripts=comp153974_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147032790	147033278	.	-	.	ID=comp153974_c0_seq1.mrna1;geneID=comp153974_c0_seq1.path1;Name=comp153974_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=488;mismatches=1;indels=0;unknowns=0;Target=comp153974_c0_seq1 489 1 .;CDS_Target=comp153974_c0_seq1 342 256 .;locus=RLOC_00022535
Chr2	stalkie_big_nohaplotig	exon	147032790	147033278	99	-	.	Parent=comp153974_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147032937	147033023	.	-	0	Parent=comp153974_c0_seq1.mrna1
Chr2	gffcl	locus	147085090	147085916	.	-	.	ID=RLOC_00022536;geneIDs=comp160672_c0_seq1.path1;transcripts=comp160672_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147085090	147085916	.	-	.	ID=comp160672_c0_seq1.mrna1;geneID=comp160672_c0_seq1.path1;Name=comp160672_c0_seq1;Dir=indeterminatecoverage=95.6;identity=97.1;matches=810;mismatches=16;indels=8;unknowns=0;Target=comp160672_c0_seq1 833 1 .;CDS_Target=comp160672_c0_seq1 767 447 .;locus=RLOC_00022536
Chr2	stalkie_big_nohaplotig	exon	147085090	147085916	97	-	.	Parent=comp160672_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147085156	147085476	.	-	0	Parent=comp160672_c0_seq1.mrna1
Chr2	gffcl	locus	147093726	147094292	.	+	.	ID=RLOC_00022537;geneIDs=comp142793_c1_seq1.path1;transcripts=comp142793_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147093726	147094292	.	+	.	ID=comp142793_c1_seq1.mrna1;geneID=comp142793_c1_seq1.path1;Name=comp142793_c1_seq1;Dir=sensecoverage=99.7;identity=98.0;matches=350;mismatches=7;indels=0;unknowns=0;Target=comp142793_c1_seq1 3 110 +;locus=RLOC_00022537
Chr2	stalkie_big_nohaplotig	exon	147093726	147093860	99	+	.	Parent=comp142793_c1_seq1.mrna1;Target=comp142793_c1_seq1 1 135 +
Chr2	stalkie_big_nohaplotig	exon	147094008	147094129	98	+	.	Parent=comp142793_c1_seq1.mrna1;Target=comp142793_c1_seq1 136 257 +
Chr2	stalkie_big_nohaplotig	exon	147094193	147094292	96	+	.	Parent=comp142793_c1_seq1.mrna1;Target=comp142793_c1_seq1 258 357 +
Chr2	stalkie_big_nohaplotig	CDS	147093728	147093835	.	+	0	Parent=comp142793_c1_seq1.mrna1
Chr2	gffcl	locus	147177858	147178822	.	+	.	ID=RLOC_00022538;geneIDs=comp160881_c1_seq1.path1;transcripts=comp160881_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147177858	147178822	.	+	.	ID=comp160881_c1_seq1.mrna1;geneID=comp160881_c1_seq1.path1;Name=comp160881_c1_seq1;Dir=indeterminatecoverage=99.8;identity=98.8;matches=953;mismatches=12;indels=0;unknowns=0;Target=comp160881_c1_seq1 965 1 .;CDS_Target=comp160881_c1_seq1 960 1 .;locus=RLOC_00022538
Chr2	stalkie_big_nohaplotig	exon	147177858	147178822	98	+	.	Parent=comp160881_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147177858	147178817	.	+	0	Parent=comp160881_c1_seq1.mrna1
Chr2	gffcl	locus	147190472	147191572	.	+	.	ID=RLOC_00022539;geneIDs=ORF1444.path1;transcripts=ORF1444.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147190472	147191572	.	+	.	ID=ORF1444.mrna1;geneID=ORF1444.path1;Name=ORF1444;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1094;mismatches=7;indels=0;unknowns=0;Target=ORF1444 1101 1 .;locus=RLOC_00022539
Chr2	stalkie_big_nohaplotig	exon	147190472	147191572	99	+	.	Parent=ORF1444.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147190472	147191572	.	+	0	Parent=ORF1444.mrna1
Chr2	gffcl	locus	147192823	147193605	.	-	.	ID=RLOC_00022540;geneIDs=comp154871_c0_seq1.path1;transcripts=comp154871_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147192823	147193605	.	-	.	ID=comp154871_c0_seq1.mrna1;geneID=comp154871_c0_seq1.path1;Name=comp154871_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.6;matches=758;mismatches=10;indels=17;unknowns=0;Target=comp154871_c0_seq1 770 1 .;CDS_Target=comp154871_c0_seq1 682 503 .;locus=RLOC_00022540
Chr2	stalkie_big_nohaplotig	exon	147192823	147193605	96	-	.	Parent=comp154871_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147192911	147193099	.	-	0	Parent=comp154871_c0_seq1.mrna1
Chr2	gffcl	locus	147195490	147196131	.	-	.	ID=RLOC_00022541;geneIDs=comp152872_c0_seq1.path1;transcripts=comp152872_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147195490	147196131	.	-	.	ID=comp152872_c0_seq1.mrna1;geneID=comp152872_c0_seq1.path1;Name=comp152872_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=642;mismatches=0;indels=0;unknowns=0;Target=comp152872_c0_seq1 642 1 .;CDS_Target=comp152872_c0_seq1 614 438 .;locus=RLOC_00022541
Chr2	stalkie_big_nohaplotig	exon	147195490	147196131	100	-	.	Parent=comp152872_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147195518	147195694	.	-	0	Parent=comp152872_c0_seq1.mrna1
Chr2	gffcl	locus	147203066	147206997	.	-	.	ID=RLOC_00022542;geneIDs=FBgn0039260.1.path1,comp161839_c0_seq1.path1;transcripts=FBgn0039260.1.mrna1,comp161839_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147203066	147206997	.	-	.	ID=FBgn0039260.1.mrna1;geneID=FBgn0039260.1.path1;Name=FBgn0039260.1;Dir=sensecoverage=72.9;identity=99.2;matches=2090;mismatches=16;indels=0;unknowns=0;locus=RLOC_00022542
Chr2	stalkie_big_nohaplotig	exon	147203066	147203199	100	-	.	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 2756 2889 +
Chr2	stalkie_big_nohaplotig	exon	147203265	147203401	99	-	.	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 2619 2755 +
Chr2	stalkie_big_nohaplotig	exon	147203524	147203671	99	-	.	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 2471 2618 +
Chr2	stalkie_big_nohaplotig	exon	147204558	147204708	98	-	.	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 2320 2470 +
Chr2	stalkie_big_nohaplotig	exon	147204773	147205265	98	-	.	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 1827 2319 +
Chr2	stalkie_big_nohaplotig	exon	147205328	147205420	98	-	.	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 1734 1826 +
Chr2	stalkie_big_nohaplotig	exon	147205482	147205608	99	-	.	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 1607 1733 +
Chr2	stalkie_big_nohaplotig	exon	147205704	147205852	99	-	.	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 1458 1606 +
Chr2	stalkie_big_nohaplotig	exon	147206124	147206185	96	-	.	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 1396 1457 +
Chr2	stalkie_big_nohaplotig	exon	147206252	147206437	100	-	.	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 1210 1395 +
Chr2	stalkie_big_nohaplotig	exon	147206500	147206610	99	-	.	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 1099 1209 +
Chr2	stalkie_big_nohaplotig	exon	147206683	147206997	99	-	.	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 784 1098 +
Chr2	stalkie_big_nohaplotig	CDS	147203066	147203199	.	-	2	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 2756 2889 +
Chr2	stalkie_big_nohaplotig	CDS	147203265	147203401	.	-	1	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 2619 2755 +
Chr2	stalkie_big_nohaplotig	CDS	147203524	147203671	.	-	2	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 2471 2618 +
Chr2	stalkie_big_nohaplotig	CDS	147204558	147204708	.	-	0	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 2320 2470 +
Chr2	stalkie_big_nohaplotig	CDS	147204773	147205265	.	-	1	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 1827 2319 +
Chr2	stalkie_big_nohaplotig	CDS	147205328	147205420	.	-	1	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 1734 1826 +
Chr2	stalkie_big_nohaplotig	CDS	147205482	147205608	.	-	2	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 1607 1733 +
Chr2	stalkie_big_nohaplotig	CDS	147205704	147205852	.	-	1	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 1458 1606 +
Chr2	stalkie_big_nohaplotig	CDS	147206124	147206185	.	-	0	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 1396 1457 +
Chr2	stalkie_big_nohaplotig	CDS	147206252	147206437	.	-	0	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 1210 1395 +
Chr2	stalkie_big_nohaplotig	CDS	147206500	147206610	.	-	0	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 1099 1209 +
Chr2	stalkie_big_nohaplotig	CDS	147206683	147206997	.	-	0	Parent=FBgn0039260.1.mrna1;Target=FBgn0039260.1 784 1098 +
Chr2	stalkie_big_nohaplotig	mRNA	147203649	147204501	.	-	.	ID=comp161839_c0_seq1.mrna1;geneID=comp161839_c0_seq1.path1;Name=comp161839_c0_seq1;Dir=indeterminatecoverage=98.3;identity=94.3;matches=826;mismatches=23;indels=27;unknowns=0;Target=comp161839_c0_seq1 887 16 .;CDS_Target=comp161839_c0_seq1 777 649 .;locus=RLOC_00022542
Chr2	stalkie_big_nohaplotig	exon	147203649	147204501	94	-	.	Parent=comp161839_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147203759	147203887	.	-	0	Parent=comp161839_c0_seq1.mrna1
Chr2	gffcl	locus	147327451	147328077	.	+	.	ID=RLOC_00022543;geneIDs=comp144170_c0_seq1.path2;transcripts=comp144170_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	147327451	147328077	.	+	.	ID=comp144170_c0_seq1.mrna2;geneID=comp144170_c0_seq1.path2;Name=comp144170_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=620;mismatches=6;indels=6;unknowns=0;Target=comp144170_c0_seq1 631 1 .;CDS_Target=comp144170_c0_seq1 117 1 .;locus=RLOC_00022543
Chr2	stalkie_big_nohaplotig	exon	147327451	147328077	98	+	.	Parent=comp144170_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	147327451	147327567	.	+	0	Parent=comp144170_c0_seq1.mrna2
Chr2	gffcl	locus	147336128	147337181	.	+	.	ID=RLOC_00022544;geneIDs=FBgn0038672.1.path1;transcripts=FBgn0038672.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147336128	147337181	.	+	.	ID=FBgn0038672.1.mrna1;geneID=FBgn0038672.1.path1;Name=FBgn0038672.1;Dir=sensecoverage=100.0;identity=99.1;matches=928;mismatches=8;indels=0;unknowns=0;locus=RLOC_00022544
Chr2	stalkie_big_nohaplotig	exon	147336128	147336374	99	+	.	Parent=FBgn0038672.1.mrna1;Target=FBgn0038672.1 1 247 +
Chr2	stalkie_big_nohaplotig	exon	147336430	147336570	100	+	.	Parent=FBgn0038672.1.mrna1;Target=FBgn0038672.1 248 388 +
Chr2	stalkie_big_nohaplotig	exon	147336634	147337181	98	+	.	Parent=FBgn0038672.1.mrna1;Target=FBgn0038672.1 389 936 +
Chr2	stalkie_big_nohaplotig	CDS	147336128	147336374	.	+	0	Parent=FBgn0038672.1.mrna1;Target=FBgn0038672.1 1 247 +
Chr2	stalkie_big_nohaplotig	CDS	147336430	147336570	.	+	2	Parent=FBgn0038672.1.mrna1;Target=FBgn0038672.1 248 388 +
Chr2	stalkie_big_nohaplotig	CDS	147336634	147337181	.	+	2	Parent=FBgn0038672.1.mrna1;Target=FBgn0038672.1 389 936 +
Chr2	gffcl	locus	147337552	147338285	.	+	.	ID=RLOC_00022545;geneIDs=comp157851_c0_seq1.path1;transcripts=comp157851_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147337552	147338285	.	+	.	ID=comp157851_c0_seq1.mrna1;geneID=comp157851_c0_seq1.path1;Name=comp157851_c0_seq1;Dir=indeterminatecoverage=96.5;identity=97.6;matches=718;mismatches=16;indels=2;unknowns=0;Target=comp157851_c0_seq1 763 28 .;CDS_Target=comp157851_c0_seq1 628 542 .;locus=RLOC_00022545
Chr2	stalkie_big_nohaplotig	exon	147337552	147338285	97	+	.	Parent=comp157851_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147338064	147338150	.	+	0	Parent=comp157851_c0_seq1.mrna1
Chr2	gffcl	locus	147351452	147352621	.	-	.	ID=RLOC_00022547;geneIDs=FBgn0032160.2.path1;transcripts=FBgn0032160.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147351452	147352621	.	-	.	ID=FBgn0032160.2.mrna1;geneID=FBgn0032160.2.path1;Name=FBgn0032160.2;Dir=sensecoverage=100.0;identity=99.3;matches=849;mismatches=6;indels=0;unknowns=0;locus=RLOC_00022547
Chr2	stalkie_big_nohaplotig	exon	147351452	147351916	99	-	.	Parent=FBgn0032160.2.mrna1;Target=FBgn0032160.2 391 855 +
Chr2	stalkie_big_nohaplotig	exon	147351973	147352119	98	-	.	Parent=FBgn0032160.2.mrna1;Target=FBgn0032160.2 244 390 +
Chr2	stalkie_big_nohaplotig	exon	147352379	147352621	100	-	.	Parent=FBgn0032160.2.mrna1;Target=FBgn0032160.2 1 243 +
Chr2	stalkie_big_nohaplotig	CDS	147351452	147351916	.	-	0	Parent=FBgn0032160.2.mrna1;Target=FBgn0032160.2 391 855 +
Chr2	stalkie_big_nohaplotig	CDS	147351973	147352119	.	-	0	Parent=FBgn0032160.2.mrna1;Target=FBgn0032160.2 244 390 +
Chr2	stalkie_big_nohaplotig	CDS	147352379	147352621	.	-	0	Parent=FBgn0032160.2.mrna1;Target=FBgn0032160.2 1 243 +
Chr2	gffcl	locus	147353285	147353690	.	+	.	ID=RLOC_00022548;geneIDs=FBgn0039259.1.path1;transcripts=FBgn0039259.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147353285	147353690	.	+	.	ID=FBgn0039259.1.mrna1;geneID=FBgn0039259.1.path1;Name=FBgn0039259.1;Dir=sensecoverage=100.0;identity=99.7;matches=353;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022548
Chr2	stalkie_big_nohaplotig	exon	147353285	147353432	100	+	.	Parent=FBgn0039259.1.mrna1;Target=FBgn0039259.1 1 148 +
Chr2	stalkie_big_nohaplotig	exon	147353485	147353690	99	+	.	Parent=FBgn0039259.1.mrna1;Target=FBgn0039259.1 149 354 +
Chr2	stalkie_big_nohaplotig	CDS	147353285	147353432	.	+	0	Parent=FBgn0039259.1.mrna1;Target=FBgn0039259.1 1 148 +
Chr2	stalkie_big_nohaplotig	CDS	147353485	147353690	.	+	2	Parent=FBgn0039259.1.mrna1;Target=FBgn0039259.1 149 354 +
Chr2	gffcl	locus	147353793	147354857	.	-	.	ID=RLOC_00022549;geneIDs=FBgn0039258.1.path1;transcripts=FBgn0039258.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147353793	147354857	.	-	.	ID=FBgn0039258.1.mrna1;geneID=FBgn0039258.1.path1;Name=FBgn0039258.1;Dir=sensecoverage=100.0;identity=99.8;matches=952;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022549
Chr2	stalkie_big_nohaplotig	exon	147353793	147354045	100	-	.	Parent=FBgn0039258.1.mrna1;Target=FBgn0039258.1 702 954 +
Chr2	stalkie_big_nohaplotig	exon	147354101	147354683	99	-	.	Parent=FBgn0039258.1.mrna1;Target=FBgn0039258.1 119 701 +
Chr2	stalkie_big_nohaplotig	exon	147354740	147354857	100	-	.	Parent=FBgn0039258.1.mrna1;Target=FBgn0039258.1 1 118 +
Chr2	stalkie_big_nohaplotig	CDS	147353793	147354045	.	-	1	Parent=FBgn0039258.1.mrna1;Target=FBgn0039258.1 702 954 +
Chr2	stalkie_big_nohaplotig	CDS	147354101	147354683	.	-	2	Parent=FBgn0039258.1.mrna1;Target=FBgn0039258.1 119 701 +
Chr2	stalkie_big_nohaplotig	CDS	147354740	147354857	.	-	0	Parent=FBgn0039258.1.mrna1;Target=FBgn0039258.1 1 118 +
Chr2	gffcl	locus	147355551	147355930	.	+	.	ID=RLOC_00022550;geneIDs=FBgn0024432.1.path1;transcripts=FBgn0024432.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147355551	147355930	.	+	.	ID=FBgn0024432.1.mrna1;geneID=FBgn0024432.1.path1;Name=FBgn0024432.1;Dir=indeterminatecoverage=99.7;identity=99.5;matches=378;mismatches=2;indels=0;unknowns=0;Target=FBgn0024432.1 380 1 .;CDS_Target=FBgn0024432.1 378 1 .;locus=RLOC_00022550
Chr2	stalkie_big_nohaplotig	exon	147355551	147355930	99	+	.	Parent=FBgn0024432.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147355551	147355928	.	+	0	Parent=FBgn0024432.1.mrna1
Chr2	gffcl	locus	147358360	147359316	.	-	.	ID=RLOC_00022551;geneIDs=comp152615_c0_seq1.path1;transcripts=comp152615_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147358360	147359316	.	-	.	ID=comp152615_c0_seq1.mrna1;geneID=comp152615_c0_seq1.path1;Name=comp152615_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.8;matches=955;mismatches=2;indels=10;unknowns=0;Target=comp152615_c0_seq1 967 1 .;CDS_Target=comp152615_c0_seq1 453 328 .;locus=RLOC_00022551
Chr2	stalkie_big_nohaplotig	exon	147358360	147359316	98	-	.	Parent=comp152615_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147358864	147358989	.	-	0	Parent=comp152615_c0_seq1.mrna1
Chr2	gffcl	locus	147360001	147376808	.	.	.	ID=RLOC_00022552;geneIDs=FBgn0039257.path1,comp131688_c0_seq1.path1,comp135944_c0_seq1.path1;transcripts=FBgn0039257.mrna1,FBgn0039257.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147360001	147376808	.	-	.	ID=FBgn0039257.mrna1;geneID=FBgn0039257.path1;Name=FBgn0039257;Dir=sensecoverage=95.9;identity=99.5;matches=2070;mismatches=10;indels=0;unknowns=0;locus=RLOC_00022552
Chr2	stalkie_big_nohaplotig	exon	147360001	147360100	100	-	.	Parent=FBgn0039257.mrna1;Target=FBgn0039257 2070 2169 +
Chr2	stalkie_big_nohaplotig	exon	147360208	147362187	99	-	.	Parent=FBgn0039257.mrna1;Target=FBgn0039257 90 2069 +
Chr2	stalkie_big_nohaplotig	exon	147362391	147362490	93	-	.	Parent=FBgn0039257.mrna1;Target=FBgn0039257 3945 4044 +
Chr2	stalkie_big_nohaplotig	exon	147364264	147364333	72	-	.	Parent=FBgn0039257.mrna1;Target=FBgn0039257 3869 3944 +
Chr2	stalkie_big_nohaplotig	exon	147366124	147366158	80	-	.	Parent=FBgn0039257.mrna1;Target=FBgn0039257 3834 3868 +
Chr2	stalkie_big_nohaplotig	exon	147367065	147367081	94	-	.	Parent=FBgn0039257.mrna1;Target=FBgn0039257 3817 3833 +
Chr2	stalkie_big_nohaplotig	exon	147367613	147370752	99	-	.	Parent=FBgn0039257.mrna1;Target=FBgn0039257 677 3816 +
Chr2	stalkie_big_nohaplotig	exon	147370851	147371105	100	-	.	Parent=FBgn0039257.mrna1;Target=FBgn0039257 422 676 +
Chr2	stalkie_big_nohaplotig	exon	147371187	147371384	99	-	.	Parent=FBgn0039257.mrna1;Target=FBgn0039257 224 421 +
Chr2	stalkie_big_nohaplotig	exon	147376769	147376808	100	-	.	Parent=FBgn0039257.mrna1;Target=FBgn0039257 184 223 +
Chr2	stalkie_big_nohaplotig	CDS	147360001	147360100	100	-	2	Parent=FBgn0039257.mrna1;Target=FBgn0039257 2070 2169 +
Chr2	stalkie_big_nohaplotig	CDS	147360208	147362186	99	-	0	Parent=FBgn0039257.mrna1;Target=FBgn0039257 91 2069 +
Chr2	stalkie_big_nohaplotig	CDS	147362391	147362490	93	-	2	Parent=FBgn0039257.mrna1;Target=FBgn0039257 3945 4044 +
Chr2	stalkie_big_nohaplotig	CDS	147364264	147364333	72	-	1	Parent=FBgn0039257.mrna1;Target=FBgn0039257 3869 3944 +
Chr2	stalkie_big_nohaplotig	CDS	147366124	147366158	80	-	2	Parent=FBgn0039257.mrna1;Target=FBgn0039257 3834 3868 +
Chr2	stalkie_big_nohaplotig	CDS	147367065	147367081	94	-	0	Parent=FBgn0039257.mrna1;Target=FBgn0039257 3817 3833 +
Chr2	stalkie_big_nohaplotig	CDS	147367613	147370752	99	-	1	Parent=FBgn0039257.mrna1;Target=FBgn0039257 677 3816 +
Chr2	stalkie_big_nohaplotig	CDS	147370851	147371105	100	-	1	Parent=FBgn0039257.mrna1;Target=FBgn0039257 422 676 +
Chr2	stalkie_big_nohaplotig	CDS	147371187	147371384	99	-	1	Parent=FBgn0039257.mrna1;Target=FBgn0039257 224 421 +
Chr2	stalkie_big_nohaplotig	CDS	147376769	147376808	100	-	0	Parent=FBgn0039257.mrna1;Target=FBgn0039257 184 223 +
Chr2	stalkie_big_nohaplotig	mRNA	147362391	147376808	.	-	.	ID=FBgn0039257.mrna1;geneID=FBgn0039257.path1;Name=FBgn0039257;Dir=sensecoverage=95.5;identity=98.9;matches=3818;mismatches=37;indels=6;unknowns=0;locus=RLOC_00022552
Chr2	stalkie_big_nohaplotig	exon	147362391	147376808	.	-	.	Parent=FBgn0039257.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147362483	147362746	.	-	0	Parent=FBgn0039257.mrna1
Chr2	gffcl	locus	147490637	147491262	.	+	.	ID=RLOC_00022553;geneIDs=comp144170_c0_seq1.path1;transcripts=comp144170_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147490637	147491262	.	+	.	ID=comp144170_c0_seq1.mrna1;geneID=comp144170_c0_seq1.path1;Name=comp144170_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=621;mismatches=5;indels=5;unknowns=0;Target=comp144170_c0_seq1 631 1 .;CDS_Target=comp144170_c0_seq1 117 1 .;locus=RLOC_00022553
Chr2	stalkie_big_nohaplotig	exon	147490637	147491262	98	+	.	Parent=comp144170_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147490637	147490753	.	+	0	Parent=comp144170_c0_seq1.mrna1
Chr2	gffcl	locus	147498632	147499500	.	-	.	ID=RLOC_00022555;geneIDs=FBgn0027841.path1;transcripts=FBgn0027841.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147498632	147499500	.	-	.	ID=FBgn0027841.mrna1;geneID=FBgn0027841.path1;Name=FBgn0027841;Dir=sensecoverage=100.0;identity=99.9;matches=677;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022555
Chr2	stalkie_big_nohaplotig	exon	147498632	147498739	100	-	.	Parent=FBgn0027841.mrna1;Target=FBgn0027841 571 678 +
Chr2	stalkie_big_nohaplotig	exon	147498800	147499223	100	-	.	Parent=FBgn0027841.mrna1;Target=FBgn0027841 147 570 +
Chr2	stalkie_big_nohaplotig	exon	147499301	147499379	100	-	.	Parent=FBgn0027841.mrna1;Target=FBgn0027841 68 146 +
Chr2	stalkie_big_nohaplotig	exon	147499434	147499500	98	-	.	Parent=FBgn0027841.mrna1;Target=FBgn0027841 1 67 +
Chr2	stalkie_big_nohaplotig	CDS	147498632	147498739	.	-	0	Parent=FBgn0027841.mrna1;Target=FBgn0027841 571 678 +
Chr2	stalkie_big_nohaplotig	CDS	147498800	147499223	.	-	1	Parent=FBgn0027841.mrna1;Target=FBgn0027841 147 570 +
Chr2	stalkie_big_nohaplotig	CDS	147499301	147499379	.	-	2	Parent=FBgn0027841.mrna1;Target=FBgn0027841 68 146 +
Chr2	stalkie_big_nohaplotig	CDS	147499434	147499500	.	-	0	Parent=FBgn0027841.mrna1;Target=FBgn0027841 1 67 +
Chr2	gffcl	locus	147510572	147517560	.	+	.	ID=RLOC_00022556;geneIDs=FBgn0051224.1.path1,comp163169_c2_seq1.path1;transcripts=FBgn0051224.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147510572	147517560	.	+	.	ID=FBgn0051224.1.mrna1;geneID=FBgn0051224.1.path1;Name=FBgn0051224.1;Dir=sensecoverage=99.9;identity=99.5;matches=4763;mismatches=22;indels=3;unknowns=0;locus=RLOC_00022556
Chr2	stalkie_big_nohaplotig	exon	147510572	147513145	99	+	.	Parent=FBgn0051224.1.mrna1;Target=FBgn0051224.1 7 2580 +
Chr2	stalkie_big_nohaplotig	exon	147513320	147513477	97	+	.	Parent=FBgn0051224.1.mrna1;Target=FBgn0051224.1 2581 2738 +
Chr2	stalkie_big_nohaplotig	exon	147513537	147514813	99	+	.	Parent=FBgn0051224.1.mrna1;Target=FBgn0051224.1 2739 4018 +
Chr2	stalkie_big_nohaplotig	exon	147516785	147517560	99	+	.	Parent=FBgn0051224.1.mrna1;Target=FBgn0051224.1 4019 4794 +
Chr2	stalkie_big_nohaplotig	CDS	147510572	147513145	.	+	0	Parent=FBgn0051224.1.mrna1;Target=FBgn0051224.1 7 2580 +
Chr2	stalkie_big_nohaplotig	CDS	147513320	147513477	.	+	0	Parent=FBgn0051224.1.mrna1;Target=FBgn0051224.1 2581 2738 +
Chr2	stalkie_big_nohaplotig	CDS	147513537	147514813	.	+	1	Parent=FBgn0051224.1.mrna1;Target=FBgn0051224.1 2739 4018 +
Chr2	stalkie_big_nohaplotig	CDS	147516785	147517560	.	+	2	Parent=FBgn0051224.1.mrna1;Target=FBgn0051224.1 4019 4794 +
Chr2	gffcl	locus	147517698	147519090	.	+	.	ID=RLOC_00022557;geneIDs=comp156457_c0_seq1.path2;transcripts=comp156457_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	147517698	147519090	.	+	.	ID=comp156457_c0_seq1.mrna2;geneID=comp156457_c0_seq1.path2;Name=comp156457_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1381;mismatches=12;indels=1;unknowns=0;Target=comp156457_c0_seq1 1394 1 .;CDS_Target=comp156457_c0_seq1 614 453 .;locus=RLOC_00022557
Chr2	stalkie_big_nohaplotig	exon	147517698	147519090	99	+	.	Parent=comp156457_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	147518149	147518310	.	+	0	Parent=comp156457_c0_seq1.mrna2
Chr2	gffcl	locus	147531062	147556583	.	+	.	ID=RLOC_00022558;geneIDs=FBgn0261053.1.path1;transcripts=FBgn0261053.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147531062	147556583	.	+	.	ID=FBgn0261053.1.mrna1;geneID=FBgn0261053.1.path1;Name=FBgn0261053.1;Dir=sensecoverage=99.0;identity=99.7;matches=4337;mismatches=15;indels=0;unknowns=0;locus=RLOC_00022558
Chr2	stalkie_big_nohaplotig	exon	147531062	147531611	99	+	.	Parent=FBgn0261053.1.mrna1;Target=FBgn0261053.1 39 588 +
Chr2	stalkie_big_nohaplotig	exon	147535686	147535769	100	+	.	Parent=FBgn0261053.1.mrna1;Target=FBgn0261053.1 589 672 +
Chr2	stalkie_big_nohaplotig	exon	147535913	147536038	99	+	.	Parent=FBgn0261053.1.mrna1;Target=FBgn0261053.1 673 798 +
Chr2	stalkie_big_nohaplotig	exon	147538342	147538491	100	+	.	Parent=FBgn0261053.1.mrna1;Target=FBgn0261053.1 799 948 +
Chr2	stalkie_big_nohaplotig	exon	147541315	147541429	99	+	.	Parent=FBgn0261053.1.mrna1;Target=FBgn0261053.1 949 1063 +
Chr2	stalkie_big_nohaplotig	exon	147550088	147550280	100	+	.	Parent=FBgn0261053.1.mrna1;Target=FBgn0261053.1 1064 1256 +
Chr2	stalkie_big_nohaplotig	exon	147550519	147551854	99	+	.	Parent=FBgn0261053.1.mrna1;Target=FBgn0261053.1 1257 2592 +
Chr2	stalkie_big_nohaplotig	exon	147551911	147552059	99	+	.	Parent=FBgn0261053.1.mrna1;Target=FBgn0261053.1 2593 2741 +
Chr2	stalkie_big_nohaplotig	exon	147554385	147554475	100	+	.	Parent=FBgn0261053.1.mrna1;Target=FBgn0261053.1 2742 2832 +
Chr2	stalkie_big_nohaplotig	exon	147554966	147555180	98	+	.	Parent=FBgn0261053.1.mrna1;Target=FBgn0261053.1 2833 3047 +
Chr2	stalkie_big_nohaplotig	exon	147555241	147556583	99	+	.	Parent=FBgn0261053.1.mrna1;Target=FBgn0261053.1 3048 4390 +
Chr2	stalkie_big_nohaplotig	CDS	147531063	147531611	.	+	0	Parent=FBgn0261053.1.mrna1;Target=FBgn0261053.1 40 588 +
Chr2	stalkie_big_nohaplotig	CDS	147535686	147535769	.	+	0	Parent=FBgn0261053.1.mrna1;Target=FBgn0261053.1 589 672 +
Chr2	stalkie_big_nohaplotig	CDS	147535913	147536038	.	+	0	Parent=FBgn0261053.1.mrna1;Target=FBgn0261053.1 673 798 +
Chr2	stalkie_big_nohaplotig	CDS	147538342	147538491	.	+	0	Parent=FBgn0261053.1.mrna1;Target=FBgn0261053.1 799 948 +
Chr2	stalkie_big_nohaplotig	CDS	147541315	147541429	.	+	0	Parent=FBgn0261053.1.mrna1;Target=FBgn0261053.1 949 1063 +
Chr2	stalkie_big_nohaplotig	CDS	147550088	147550280	.	+	2	Parent=FBgn0261053.1.mrna1;Target=FBgn0261053.1 1064 1256 +
Chr2	stalkie_big_nohaplotig	CDS	147550519	147551854	.	+	1	Parent=FBgn0261053.1.mrna1;Target=FBgn0261053.1 1257 2592 +
Chr2	stalkie_big_nohaplotig	CDS	147551911	147552059	.	+	0	Parent=FBgn0261053.1.mrna1;Target=FBgn0261053.1 2593 2741 +
Chr2	stalkie_big_nohaplotig	CDS	147554385	147554475	.	+	1	Parent=FBgn0261053.1.mrna1;Target=FBgn0261053.1 2742 2832 +
Chr2	stalkie_big_nohaplotig	CDS	147554966	147555180	.	+	0	Parent=FBgn0261053.1.mrna1;Target=FBgn0261053.1 2833 3047 +
Chr2	stalkie_big_nohaplotig	CDS	147555241	147556582	.	+	1	Parent=FBgn0261053.1.mrna1;Target=FBgn0261053.1 3048 4389 +
Chr2	gffcl	locus	147561051	147568475	.	+	.	ID=RLOC_00022559;geneIDs=comp156187_c1_seq1.path1;transcripts=comp156187_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147561051	147568475	.	+	.	ID=comp156187_c1_seq1.mrna1;geneID=comp156187_c1_seq1.path1;Name=comp156187_c1_seq1;Dir=sensecoverage=99.9;identity=98.6;matches=816;mismatches=12;indels=0;unknowns=0;locus=RLOC_00022559
Chr2	stalkie_big_nohaplotig	exon	147561051	147561166	94	+	.	Parent=comp156187_c1_seq1.mrna1;Target=comp156187_c1_seq1 2 117 +
Chr2	stalkie_big_nohaplotig	exon	147561423	147561550	100	+	.	Parent=comp156187_c1_seq1.mrna1;Target=comp156187_c1_seq1 118 245 +
Chr2	stalkie_big_nohaplotig	exon	147566005	147566195	98	+	.	Parent=comp156187_c1_seq1.mrna1;Target=comp156187_c1_seq1 246 436 +
Chr2	stalkie_big_nohaplotig	exon	147568083	147568475	98	+	.	Parent=comp156187_c1_seq1.mrna1;Target=comp156187_c1_seq1 437 829 +
Chr2	stalkie_big_nohaplotig	CDS	147561516	147561550	.	+	0	Parent=comp156187_c1_seq1.mrna1;Target=comp156187_c1_seq1 211 245 +
Chr2	stalkie_big_nohaplotig	CDS	147566005	147566194	.	+	1	Parent=comp156187_c1_seq1.mrna1;Target=comp156187_c1_seq1 246 435 +
Chr2	gffcl	locus	147566763	147567652	.	+	.	ID=RLOC_00022560;geneIDs=comp155733_c1_seq1.path1;transcripts=comp155733_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147566763	147567652	.	+	.	ID=comp155733_c1_seq1.mrna1;geneID=comp155733_c1_seq1.path1;Name=comp155733_c1_seq1;Dir=indeterminatecoverage=99.7;identity=88.2;matches=832;mismatches=48;indels=63;unknowns=0;Target=comp155733_c1_seq1 933 1 .;CDS_Target=comp155733_c1_seq1 887 813 .;locus=RLOC_00022560
Chr2	stalkie_big_nohaplotig	exon	147566763	147567652	88	+	.	Parent=comp155733_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147567532	147567606	.	+	0	Parent=comp155733_c1_seq1.mrna1
Chr2	gffcl	locus	147568966	147569791	.	-	.	ID=RLOC_00022561;geneIDs=comp142743_c0_seq1.path1;transcripts=comp142743_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147568966	147569791	.	-	.	ID=comp142743_c0_seq1.mrna1;geneID=comp142743_c0_seq1.path1;Name=comp142743_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=822;mismatches=4;indels=0;unknowns=0;Target=comp142743_c0_seq1 826 1 .;CDS_Target=comp142743_c0_seq1 173 81 .;locus=RLOC_00022561
Chr2	stalkie_big_nohaplotig	exon	147568966	147569791	99	-	.	Parent=comp142743_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147569619	147569711	.	-	0	Parent=comp142743_c0_seq1.mrna1
Chr2	gffcl	locus	147570528	147571416	.	+	.	ID=RLOC_00022562;geneIDs=comp152525_c0_seq1.path1;transcripts=comp152525_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147570528	147571416	.	+	.	ID=comp152525_c0_seq1.mrna1;geneID=comp152525_c0_seq1.path1;Name=comp152525_c0_seq1;Dir=sensecoverage=100.0;identity=94.0;matches=361;mismatches=22;indels=1;unknowns=0;Target=comp152525_c0_seq1 691 774 +;locus=RLOC_00022562
Chr2	stalkie_big_nohaplotig	exon	147570528	147570547	100	+	.	Parent=comp152525_c0_seq1.mrna1;Target=comp152525_c0_seq1 1 20 +
Chr2	stalkie_big_nohaplotig	exon	147571031	147571157	93	+	.	Parent=comp152525_c0_seq1.mrna1;Target=comp152525_c0_seq1 21 147 +
Chr2	stalkie_big_nohaplotig	exon	147571180	147571416	93	+	.	Parent=comp152525_c0_seq1.mrna1;Target=comp152525_c0_seq1 558 793 +
Chr2	stalkie_big_nohaplotig	CDS	147571314	147571397	.	+	0	Parent=comp152525_c0_seq1.mrna1
Chr2	gffcl	locus	147576950	147627984	.	.	.	ID=RLOC_00022563;geneIDs=comp161302_c0_seq1.path1,comp161302_c0_seq1.path2;transcripts=comp161302_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147576950	147627984	.	+	.	ID=comp161302_c0_seq1.mrna1;geneID=comp161302_c0_seq1.path1;Name=comp161302_c0_seq1;Dir=indeterminatecoverage=70.4;identity=97.6;matches=565;mismatches=10;indels=4;unknowns=0;Target=comp161302_c0_seq1 73 2 .;locus=RLOC_00022563
Chr2	stalkie_big_nohaplotig	exon	147576950	147577475	98	+	.	Parent=comp161302_c0_seq1.mrna1;Target=comp161302_c0_seq1 524 1 .
Chr2	stalkie_big_nohaplotig	exon	147593586	147593587	100	+	.	Parent=comp161302_c0_seq1.mrna1;Target=comp161302_c0_seq1 526 525 .
Chr2	stalkie_big_nohaplotig	exon	147593594	147593600	100	+	.	Parent=comp161302_c0_seq1.mrna1;Target=comp161302_c0_seq1 569 563 .
Chr2	stalkie_big_nohaplotig	exon	147598621	147598622	100	+	.	Parent=comp161302_c0_seq1.mrna1;Target=comp161302_c0_seq1 571 570 .
Chr2	stalkie_big_nohaplotig	exon	147602940	147602952	92	+	.	Parent=comp161302_c0_seq1.mrna1;Target=comp161302_c0_seq1 584 572 .
Chr2	stalkie_big_nohaplotig	exon	147604641	147604652	100	+	.	Parent=comp161302_c0_seq1.mrna1;Target=comp161302_c0_seq1 596 585 .
Chr2	stalkie_big_nohaplotig	exon	147612246	147612253	62	+	.	Parent=comp161302_c0_seq1.mrna1;Target=comp161302_c0_seq1 604 597 .
Chr2	stalkie_big_nohaplotig	exon	147618637	147618641	100	+	.	Parent=comp161302_c0_seq1.mrna1;Target=comp161302_c0_seq1 609 605 .
Chr2	stalkie_big_nohaplotig	exon	147627982	147627984	100	+	.	Parent=comp161302_c0_seq1.mrna1;Target=comp161302_c0_seq1 612 610 .
Chr2	stalkie_big_nohaplotig	CDS	147576951	147577021	.	+	0	Parent=comp161302_c0_seq1.mrna1
Chr2	gffcl	locus	147597354	147602140	.	+	.	ID=RLOC_00022564;geneIDs=comp161410_c0_seq1.path1;transcripts=comp161410_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147597354	147602140	.	+	.	ID=comp161410_c0_seq1.mrna1;geneID=comp161410_c0_seq1.path1;Name=comp161410_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=2200;mismatches=23;indels=4;unknowns=0;Target=comp161410_c0_seq1 504 313 .;locus=RLOC_00022564
Chr2	stalkie_big_nohaplotig	exon	147597354	147597474	98	+	.	Parent=comp161410_c0_seq1.mrna1;Target=comp161410_c0_seq1 121 1 .
Chr2	stalkie_big_nohaplotig	exon	147598926	147600001	98	+	.	Parent=comp161410_c0_seq1.mrna1;Target=comp161410_c0_seq1 1201 122 .
Chr2	stalkie_big_nohaplotig	exon	147601115	147602140	99	+	.	Parent=comp161410_c0_seq1.mrna1;Target=comp161410_c0_seq1 2227 1202 .
Chr2	stalkie_big_nohaplotig	CDS	147599117	147599308	.	+	0	Parent=comp161410_c0_seq1.mrna1
Chr2	gffcl	locus	147608242	147609165	.	+	.	ID=RLOC_00022565;geneIDs=FBgn0037841.1.path1;transcripts=FBgn0037841.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147608242	147609165	.	+	.	ID=FBgn0037841.1.mrna1;geneID=FBgn0037841.1.path1;Name=FBgn0037841.1;Dir=sensecoverage=100.0;identity=98.6;matches=852;mismatches=12;indels=0;unknowns=0;locus=RLOC_00022565
Chr2	stalkie_big_nohaplotig	exon	147608242	147608929	98	+	.	Parent=FBgn0037841.1.mrna1;Target=FBgn0037841.1 1 688 +
Chr2	stalkie_big_nohaplotig	exon	147608990	147609165	98	+	.	Parent=FBgn0037841.1.mrna1;Target=FBgn0037841.1 689 864 +
Chr2	stalkie_big_nohaplotig	CDS	147608242	147608929	.	+	0	Parent=FBgn0037841.1.mrna1;Target=FBgn0037841.1 1 688 +
Chr2	stalkie_big_nohaplotig	CDS	147608990	147609165	.	+	2	Parent=FBgn0037841.1.mrna1;Target=FBgn0037841.1 689 864 +
Chr2	gffcl	locus	147609286	147610075	.	-	.	ID=RLOC_00022566;geneIDs=FBgn0037842.1.path1;transcripts=FBgn0037842.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147609286	147610075	.	-	.	ID=FBgn0037842.1.mrna1;geneID=FBgn0037842.1.path1;Name=FBgn0037842.1;Dir=sensecoverage=100.0;identity=97.8;matches=719;mismatches=16;indels=0;unknowns=0;locus=RLOC_00022566
Chr2	stalkie_big_nohaplotig	exon	147609286	147609923	97	-	.	Parent=FBgn0037842.1.mrna1;Target=FBgn0037842.1 98 735 +
Chr2	stalkie_big_nohaplotig	exon	147609979	147610075	96	-	.	Parent=FBgn0037842.1.mrna1;Target=FBgn0037842.1 1 97 +
Chr2	stalkie_big_nohaplotig	CDS	147609286	147609923	.	-	2	Parent=FBgn0037842.1.mrna1;Target=FBgn0037842.1 98 735 +
Chr2	stalkie_big_nohaplotig	CDS	147609979	147610075	.	-	0	Parent=FBgn0037842.1.mrna1;Target=FBgn0037842.1 1 97 +
Chr2	gffcl	locus	147640486	147642420	.	+	.	ID=RLOC_00022567;geneIDs=FBgn0038475.path1;transcripts=FBgn0038475.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147640486	147642420	.	+	.	ID=FBgn0038475.mrna1;geneID=FBgn0038475.path1;Name=FBgn0038475;Dir=sensecoverage=100.0;identity=99.5;matches=1319;mismatches=6;indels=0;unknowns=1;locus=RLOC_00022567
Chr2	stalkie_big_nohaplotig	exon	147640486	147640859	99	+	.	Parent=FBgn0038475.mrna1;Target=FBgn0038475 1 374 +
Chr2	stalkie_big_nohaplotig	exon	147640925	147641130	100	+	.	Parent=FBgn0038475.mrna1;Target=FBgn0038475 375 580 +
Chr2	stalkie_big_nohaplotig	exon	147641675	147642420	99	+	.	Parent=FBgn0038475.mrna1;Target=FBgn0038475 581 1326 +
Chr2	stalkie_big_nohaplotig	CDS	147640486	147640859	.	+	0	Parent=FBgn0038475.mrna1;Target=FBgn0038475 1 374 +
Chr2	stalkie_big_nohaplotig	CDS	147640925	147641130	.	+	1	Parent=FBgn0038475.mrna1;Target=FBgn0038475 375 580 +
Chr2	stalkie_big_nohaplotig	CDS	147641675	147642420	.	+	2	Parent=FBgn0038475.mrna1;Target=FBgn0038475 581 1326 +
Chr2	gffcl	locus	147643869	147645538	.	-	.	ID=RLOC_00022568;geneIDs=FBgn0038474.1.path1;transcripts=FBgn0038474.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147643869	147645538	.	-	.	ID=FBgn0038474.1.mrna1;geneID=FBgn0038474.1.path1;Name=FBgn0038474.1;Dir=sensecoverage=98.8;identity=99.5;matches=404;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022568
Chr2	stalkie_big_nohaplotig	exon	147643869	147643973	100	-	.	Parent=FBgn0038474.1.mrna1;Target=FBgn0038474.1 307 411 +
Chr2	stalkie_big_nohaplotig	exon	147645120	147645185	100	-	.	Parent=FBgn0038474.1.mrna1;Target=FBgn0038474.1 241 306 +
Chr2	stalkie_big_nohaplotig	exon	147645242	147645342	99	-	.	Parent=FBgn0038474.1.mrna1;Target=FBgn0038474.1 140 240 +
Chr2	stalkie_big_nohaplotig	exon	147645405	147645538	99	-	.	Parent=FBgn0038474.1.mrna1;Target=FBgn0038474.1 6 139 +
Chr2	stalkie_big_nohaplotig	CDS	147643869	147643973	.	-	0	Parent=FBgn0038474.1.mrna1;Target=FBgn0038474.1 307 411 +
Chr2	stalkie_big_nohaplotig	CDS	147645120	147645185	.	-	0	Parent=FBgn0038474.1.mrna1;Target=FBgn0038474.1 241 306 +
Chr2	stalkie_big_nohaplotig	CDS	147645242	147645342	.	-	2	Parent=FBgn0038474.1.mrna1;Target=FBgn0038474.1 140 240 +
Chr2	stalkie_big_nohaplotig	CDS	147645405	147645537	.	-	0	Parent=FBgn0038474.1.mrna1;Target=FBgn0038474.1 7 139 +
Chr2	gffcl	locus	147647676	147648460	.	+	.	ID=RLOC_00022569;geneIDs=comp155097_c0_seq1.path1;transcripts=comp155097_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147647676	147648460	.	+	.	ID=comp155097_c0_seq1.mrna1;geneID=comp155097_c0_seq1.path1;Name=comp155097_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=779;mismatches=5;indels=3;unknowns=0;Target=comp155097_c0_seq1 786 1 .;CDS_Target=comp155097_c0_seq1 127 2 .;locus=RLOC_00022569
Chr2	stalkie_big_nohaplotig	exon	147647676	147648460	98	+	.	Parent=comp155097_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147647677	147647802	.	+	0	Parent=comp155097_c0_seq1.mrna1
Chr2	gffcl	locus	147669607	147670187	.	-	.	ID=RLOC_00022570;geneIDs=comp154580_c1_seq1.path1;transcripts=comp154580_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147669607	147670187	.	-	.	ID=comp154580_c1_seq1.mrna1;geneID=comp154580_c1_seq1.path1;Name=comp154580_c1_seq1;Dir=antisensecoverage=87.1;identity=99.0;matches=400;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022570
Chr2	stalkie_big_nohaplotig	exon	147669607	147669894	99	-	.	Parent=comp154580_c1_seq1.mrna1;Target=comp154580_c1_seq1 61 348 -
Chr2	stalkie_big_nohaplotig	exon	147670072	147670187	98	-	.	Parent=comp154580_c1_seq1.mrna1;Target=comp154580_c1_seq1 349 464 -
Chr2	stalkie_big_nohaplotig	CDS	147669818	147669894	.	-	2	Parent=comp154580_c1_seq1.mrna1;Target=comp154580_c1_seq1 272 348 .
Chr2	stalkie_big_nohaplotig	CDS	147670072	147670093	.	-	0	Parent=comp154580_c1_seq1.mrna1;Target=comp154580_c1_seq1 349 370 .
Chr2	gffcl	locus	147692263	147696953	.	+	.	ID=RLOC_00022571;geneIDs=FBgn0037751.1.path1;transcripts=FBgn0037751.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147692263	147696953	.	+	.	ID=FBgn0037751.1.mrna1;geneID=FBgn0037751.1.path1;Name=FBgn0037751.1;Dir=sensecoverage=99.8;identity=99.4;matches=3210;mismatches=19;indels=0;unknowns=0;locus=RLOC_00022571
Chr2	stalkie_big_nohaplotig	exon	147692263	147693434	99	+	.	Parent=FBgn0037751.1.mrna1;Target=FBgn0037751.1 6 1177 +
Chr2	stalkie_big_nohaplotig	exon	147693495	147693683	100	+	.	Parent=FBgn0037751.1.mrna1;Target=FBgn0037751.1 1178 1366 +
Chr2	stalkie_big_nohaplotig	exon	147693768	147693887	99	+	.	Parent=FBgn0037751.1.mrna1;Target=FBgn0037751.1 1367 1486 +
Chr2	stalkie_big_nohaplotig	exon	147694853	147695499	100	+	.	Parent=FBgn0037751.1.mrna1;Target=FBgn0037751.1 1487 2133 +
Chr2	stalkie_big_nohaplotig	exon	147695594	147695937	99	+	.	Parent=FBgn0037751.1.mrna1;Target=FBgn0037751.1 2134 2477 +
Chr2	stalkie_big_nohaplotig	exon	147696016	147696272	100	+	.	Parent=FBgn0037751.1.mrna1;Target=FBgn0037751.1 2478 2734 +
Chr2	stalkie_big_nohaplotig	exon	147696454	147696953	98	+	.	Parent=FBgn0037751.1.mrna1;Target=FBgn0037751.1 2735 3234 +
Chr2	stalkie_big_nohaplotig	CDS	147692264	147693434	.	+	0	Parent=FBgn0037751.1.mrna1;Target=FBgn0037751.1 7 1177 +
Chr2	stalkie_big_nohaplotig	CDS	147693495	147693683	.	+	2	Parent=FBgn0037751.1.mrna1;Target=FBgn0037751.1 1178 1366 +
Chr2	stalkie_big_nohaplotig	CDS	147693768	147693887	.	+	2	Parent=FBgn0037751.1.mrna1;Target=FBgn0037751.1 1367 1486 +
Chr2	stalkie_big_nohaplotig	CDS	147694853	147695499	.	+	2	Parent=FBgn0037751.1.mrna1;Target=FBgn0037751.1 1487 2133 +
Chr2	stalkie_big_nohaplotig	CDS	147695594	147695937	.	+	0	Parent=FBgn0037751.1.mrna1;Target=FBgn0037751.1 2134 2477 +
Chr2	stalkie_big_nohaplotig	CDS	147696016	147696272	.	+	1	Parent=FBgn0037751.1.mrna1;Target=FBgn0037751.1 2478 2734 +
Chr2	stalkie_big_nohaplotig	CDS	147696454	147696953	.	+	2	Parent=FBgn0037751.1.mrna1;Target=FBgn0037751.1 2735 3234 +
Chr2	gffcl	locus	147698041	147699887	.	-	.	ID=RLOC_00022572;geneIDs=CPIJ009248.1.path1;transcripts=CPIJ009248.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147698041	147699887	.	-	.	ID=CPIJ009248.1.mrna1;geneID=CPIJ009248.1.path1;Name=CPIJ009248.1;Dir=sensecoverage=100.0;identity=99.0;matches=903;mismatches=9;indels=0;unknowns=0;locus=RLOC_00022572
Chr2	stalkie_big_nohaplotig	exon	147698041	147698198	99	-	.	Parent=CPIJ009248.1.mrna1;Target=CPIJ009248.1 755 912 +
Chr2	stalkie_big_nohaplotig	exon	147698271	147698443	100	-	.	Parent=CPIJ009248.1.mrna1;Target=CPIJ009248.1 582 754 +
Chr2	stalkie_big_nohaplotig	exon	147699246	147699646	98	-	.	Parent=CPIJ009248.1.mrna1;Target=CPIJ009248.1 181 581 +
Chr2	stalkie_big_nohaplotig	exon	147699708	147699887	98	-	.	Parent=CPIJ009248.1.mrna1;Target=CPIJ009248.1 1 180 +
Chr2	stalkie_big_nohaplotig	CDS	147698041	147698198	.	-	2	Parent=CPIJ009248.1.mrna1;Target=CPIJ009248.1 755 912 +
Chr2	stalkie_big_nohaplotig	CDS	147698271	147698443	.	-	1	Parent=CPIJ009248.1.mrna1;Target=CPIJ009248.1 582 754 +
Chr2	stalkie_big_nohaplotig	CDS	147699246	147699646	.	-	0	Parent=CPIJ009248.1.mrna1;Target=CPIJ009248.1 181 581 +
Chr2	stalkie_big_nohaplotig	CDS	147699708	147699887	.	-	0	Parent=CPIJ009248.1.mrna1;Target=CPIJ009248.1 1 180 +
Chr2	gffcl	locus	147701319	147701928	.	+	.	ID=RLOC_00022573;geneIDs=FBgn0261599.1.path1;transcripts=FBgn0261599.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147701319	147701928	.	+	.	ID=FBgn0261599.1.mrna1;geneID=FBgn0261599.1.path1;Name=FBgn0261599.1;Dir=sensecoverage=96.7;identity=100.0;matches=177;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022573
Chr2	stalkie_big_nohaplotig	exon	147701319	147701395	100	+	.	Parent=FBgn0261599.1.mrna1;Target=FBgn0261599.1 1 77 +
Chr2	stalkie_big_nohaplotig	exon	147701829	147701928	100	+	.	Parent=FBgn0261599.1.mrna1;Target=FBgn0261599.1 78 177 +
Chr2	stalkie_big_nohaplotig	CDS	147701319	147701395	.	+	0	Parent=FBgn0261599.1.mrna1;Target=FBgn0261599.1 1 77 +
Chr2	stalkie_big_nohaplotig	CDS	147701829	147701928	.	+	1	Parent=FBgn0261599.1.mrna1;Target=FBgn0261599.1 78 177 +
Chr2	gffcl	locus	147702188	147702390	.	+	.	ID=RLOC_00022574;geneIDs=comp62799_c0_seq1.path1;transcripts=comp62799_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147702188	147702390	.	+	.	ID=comp62799_c0_seq1.mrna1;geneID=comp62799_c0_seq1.path1;Name=comp62799_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=201;mismatches=2;indels=0;unknowns=0;Target=comp62799_c0_seq1 203 1 .;CDS_Target=comp62799_c0_seq1 98 24 .;locus=RLOC_00022574
Chr2	stalkie_big_nohaplotig	exon	147702188	147702390	99	+	.	Parent=comp62799_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147702211	147702285	.	+	0	Parent=comp62799_c0_seq1.mrna1
Chr2	gffcl	locus	147719038	147720144	.	+	.	ID=RLOC_00022575;geneIDs=FBgn0037753.1.path1;transcripts=FBgn0037753.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147719038	147720144	.	+	.	ID=FBgn0037753.1.mrna1;geneID=FBgn0037753.1.path1;Name=FBgn0037753.1;Dir=sensecoverage=97.8;identity=98.5;matches=945;mismatches=14;indels=0;unknowns=0;locus=RLOC_00022575
Chr2	stalkie_big_nohaplotig	exon	147719038	147719586	97	+	.	Parent=FBgn0037753.1.mrna1;Target=FBgn0037753.1 23 571 +
Chr2	stalkie_big_nohaplotig	exon	147719667	147719861	100	+	.	Parent=FBgn0037753.1.mrna1;Target=FBgn0037753.1 572 766 +
Chr2	stalkie_big_nohaplotig	exon	147719930	147720144	100	+	.	Parent=FBgn0037753.1.mrna1;Target=FBgn0037753.1 767 981 +
Chr2	stalkie_big_nohaplotig	CDS	147719040	147719586	.	+	0	Parent=FBgn0037753.1.mrna1;Target=FBgn0037753.1 25 571 +
Chr2	stalkie_big_nohaplotig	CDS	147719667	147719861	.	+	2	Parent=FBgn0037753.1.mrna1;Target=FBgn0037753.1 572 766 +
Chr2	stalkie_big_nohaplotig	CDS	147719930	147720144	.	+	2	Parent=FBgn0037753.1.mrna1;Target=FBgn0037753.1 767 981 +
Chr2	gffcl	locus	147749071	147749706	.	-	.	ID=RLOC_00022576;geneIDs=comp144715_c0_seq1.path1;transcripts=comp144715_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147749071	147749706	.	-	.	ID=comp144715_c0_seq1.mrna1;geneID=comp144715_c0_seq1.path1;Name=comp144715_c0_seq1;Dir=indeterminatecoverage=98.5;identity=99.4;matches=634;mismatches=2;indels=2;unknowns=0;Target=comp144715_c0_seq1 638 1 .;CDS_Target=comp144715_c0_seq1 93 40 .;locus=RLOC_00022576
Chr2	stalkie_big_nohaplotig	exon	147749071	147749706	99	-	.	Parent=comp144715_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147749614	147749667	.	-	0	Parent=comp144715_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147883972	147884829	.	-	.	ID=comp150841_c0_seq1.mrna1;geneID=comp150841_c0_seq1.path1;Name=comp150841_c0_seq1;Dir=indeterminatecoverage=97.7;identity=97.2;matches=841;mismatches=10;indels=14;unknowns=0;Target=comp150841_c0_seq1 858 1 .;CDS_Target=comp150841_c0_seq1 380 216 .;locus=RLOC_00022577
Chr2	stalkie_big_nohaplotig	exon	147883972	147884829	97	-	.	Parent=comp150841_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147884451	147884615	.	-	0	Parent=comp150841_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147928808	147932793	.	-	.	ID=comp154603_c1_seq1.mrna1;geneID=comp154603_c1_seq1.path1;Name=comp154603_c1_seq1;Dir=indeterminatecoverage=91.6;identity=92.1;matches=714;mismatches=41;indels=20;unknowns=0;Target=comp154603_c1_seq1 299 84 .;locus=RLOC_00022577
Chr2	stalkie_big_nohaplotig	exon	147928808	147928917	90	-	.	Parent=comp154603_c1_seq1.mrna1;Target=comp154603_c1_seq1 772 663 .
Chr2	stalkie_big_nohaplotig	exon	147929900	147930135	94	-	.	Parent=comp154603_c1_seq1.mrna1;Target=comp154603_c1_seq1 662 427 .
Chr2	stalkie_big_nohaplotig	exon	147931312	147931318	100	-	.	Parent=comp154603_c1_seq1.mrna1;Target=comp154603_c1_seq1 426 420 .
Chr2	stalkie_big_nohaplotig	exon	147932389	147932793	90	-	.	Parent=comp154603_c1_seq1.mrna1;Target=comp154603_c1_seq1 419 1 .
Chr2	stalkie_big_nohaplotig	CDS	147932496	147932710	.	-	0	Parent=comp154603_c1_seq1.mrna1
Chr2	gffcl	locus	147895860	147896373	.	-	.	ID=RLOC_00022578;geneIDs=comp717228_c0_seq1.path1;transcripts=comp717228_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147895860	147896373	.	-	.	ID=comp717228_c0_seq1.mrna1;geneID=comp717228_c0_seq1.path1;Name=comp717228_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=508;mismatches=6;indels=0;unknowns=0;Target=comp717228_c0_seq1 514 1 .;CDS_Target=comp717228_c0_seq1 209 81 .;locus=RLOC_00022578
Chr2	stalkie_big_nohaplotig	exon	147895860	147896373	98	-	.	Parent=comp717228_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147896165	147896293	.	-	0	Parent=comp717228_c0_seq1.mrna1
Chr2	gffcl	locus	147901896	147902405	.	+	.	ID=RLOC_00022579;geneIDs=comp86041_c0_seq1.path1;transcripts=comp86041_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147901896	147902405	.	+	.	ID=comp86041_c0_seq1.mrna1;geneID=comp86041_c0_seq1.path1;Name=comp86041_c0_seq1;Dir=antisensecoverage=88.2;identity=99.3;matches=432;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022579
Chr2	stalkie_big_nohaplotig	exon	147901896	147902005	99	+	.	Parent=comp86041_c0_seq1.mrna1;Target=comp86041_c0_seq1 384 493 -
Chr2	stalkie_big_nohaplotig	exon	147902081	147902405	99	+	.	Parent=comp86041_c0_seq1.mrna1;Target=comp86041_c0_seq1 59 383 -
Chr2	stalkie_big_nohaplotig	CDS	147901897	147902005	.	+	0	Parent=comp86041_c0_seq1.mrna1;Target=comp86041_c0_seq1 384 492 .
Chr2	stalkie_big_nohaplotig	CDS	147902081	147902403	.	+	2	Parent=comp86041_c0_seq1.mrna1;Target=comp86041_c0_seq1 61 383 .
Chr2	gffcl	locus	147903996	147906583	.	+	.	ID=RLOC_00022580;geneIDs=FBgn0039591.2.path1;transcripts=FBgn0039591.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147903996	147906583	.	+	.	ID=FBgn0039591.2.mrna1;geneID=FBgn0039591.2.path1;Name=FBgn0039591.2;Dir=sensecoverage=99.5;identity=98.7;matches=2014;mismatches=27;indels=0;unknowns=0;locus=RLOC_00022580
Chr2	stalkie_big_nohaplotig	exon	147903996	147904532	97	+	.	Parent=FBgn0039591.2.mrna1;Target=FBgn0039591.2 12 548 +
Chr2	stalkie_big_nohaplotig	exon	147905017	147905314	99	+	.	Parent=FBgn0039591.2.mrna1;Target=FBgn0039591.2 549 846 +
Chr2	stalkie_big_nohaplotig	exon	147905378	147906583	99	+	.	Parent=FBgn0039591.2.mrna1;Target=FBgn0039591.2 847 2052 +
Chr2	stalkie_big_nohaplotig	CDS	147903997	147904532	.	+	0	Parent=FBgn0039591.2.mrna1;Target=FBgn0039591.2 13 548 +
Chr2	stalkie_big_nohaplotig	CDS	147905017	147905314	.	+	1	Parent=FBgn0039591.2.mrna1;Target=FBgn0039591.2 549 846 +
Chr2	stalkie_big_nohaplotig	CDS	147905378	147906583	.	+	0	Parent=FBgn0039591.2.mrna1;Target=FBgn0039591.2 847 2052 +
Chr2	gffcl	locus	147931447	147932073	.	+	.	ID=RLOC_00022581;geneIDs=comp148802_c0_seq1.path1;transcripts=comp148802_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147931447	147932073	.	+	.	ID=comp148802_c0_seq1.mrna1;geneID=comp148802_c0_seq1.path1;Name=comp148802_c0_seq1;Dir=sensecoverage=95.9;identity=98.9;matches=553;mismatches=6;indels=0;unknowns=0;Target=comp148802_c0_seq1 184 525 +;locus=RLOC_00022581
Chr2	stalkie_big_nohaplotig	exon	147931447	147931626	98	+	.	Parent=comp148802_c0_seq1.mrna1;Target=comp148802_c0_seq1 2 181 +
Chr2	stalkie_big_nohaplotig	exon	147931695	147932073	99	+	.	Parent=comp148802_c0_seq1.mrna1;Target=comp148802_c0_seq1 182 560 +
Chr2	stalkie_big_nohaplotig	CDS	147931697	147932038	.	+	0	Parent=comp148802_c0_seq1.mrna1
Chr2	gffcl	locus	147961197	147985172	.	+	.	ID=RLOC_00022583;geneIDs=FBgn0004889.1.path1;transcripts=FBgn0004889.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147961197	147985172	.	+	.	ID=FBgn0004889.1.mrna1;geneID=FBgn0004889.1.path1;Name=FBgn0004889.1;Dir=sensecoverage=99.4;identity=100.0;matches=1536;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022583
Chr2	stalkie_big_nohaplotig	exon	147961197	147961410	100	+	.	Parent=FBgn0004889.1.mrna1;Target=FBgn0004889.1 10 223 +
Chr2	stalkie_big_nohaplotig	exon	147982622	147982773	100	+	.	Parent=FBgn0004889.1.mrna1;Target=FBgn0004889.1 224 375 +
Chr2	stalkie_big_nohaplotig	exon	147982841	147983644	100	+	.	Parent=FBgn0004889.1.mrna1;Target=FBgn0004889.1 376 1179 +
Chr2	stalkie_big_nohaplotig	exon	147984807	147985172	100	+	.	Parent=FBgn0004889.1.mrna1;Target=FBgn0004889.1 1180 1545 +
Chr2	stalkie_big_nohaplotig	CDS	147961197	147961410	.	+	0	Parent=FBgn0004889.1.mrna1;Target=FBgn0004889.1 10 223 +
Chr2	stalkie_big_nohaplotig	CDS	147982622	147982773	.	+	2	Parent=FBgn0004889.1.mrna1;Target=FBgn0004889.1 224 375 +
Chr2	stalkie_big_nohaplotig	CDS	147982841	147983644	.	+	0	Parent=FBgn0004889.1.mrna1;Target=FBgn0004889.1 376 1179 +
Chr2	stalkie_big_nohaplotig	CDS	147984807	147985172	.	+	0	Parent=FBgn0004889.1.mrna1;Target=FBgn0004889.1 1180 1545 +
Chr2	gffcl	locus	147986216	147986553	.	+	.	ID=RLOC_00022584;geneIDs=comp106970_c0_seq1.path1;transcripts=comp106970_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147986216	147986553	.	+	.	ID=comp106970_c0_seq1.mrna1;geneID=comp106970_c0_seq1.path1;Name=comp106970_c0_seq1;Dir=indeterminatecoverage=82.2;identity=99.7;matches=337;mismatches=1;indels=0;unknowns=0;Target=comp106970_c0_seq1 411 74 .;CDS_Target=comp106970_c0_seq1 137 75 .;locus=RLOC_00022584
Chr2	stalkie_big_nohaplotig	exon	147986216	147986553	99	+	.	Parent=comp106970_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147986217	147986279	.	+	0	Parent=comp106970_c0_seq1.mrna1
Chr2	gffcl	locus	147987287	147988005	.	+	.	ID=RLOC_00022585;geneIDs=comp156585_c0_seq1.path1;transcripts=comp156585_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147987287	147988005	.	+	.	ID=comp156585_c0_seq1.mrna1;geneID=comp156585_c0_seq1.path1;Name=comp156585_c0_seq1;Dir=indeterminatecoverage=99.7;identity=97.9;matches=706;mismatches=13;indels=2;unknowns=0;Target=comp156585_c0_seq1 721 1 .;CDS_Target=comp156585_c0_seq1 98 54 .;locus=RLOC_00022585
Chr2	stalkie_big_nohaplotig	exon	147987287	147988005	97	+	.	Parent=comp156585_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147987340	147987383	.	+	0	Parent=comp156585_c0_seq1.mrna1
Chr2	gffcl	locus	147988034	147988555	.	+	.	ID=RLOC_00022586;geneIDs=comp152634_c0_seq1.path1;transcripts=comp152634_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147988034	147988555	.	+	.	ID=comp152634_c0_seq1.mrna1;geneID=comp152634_c0_seq1.path1;Name=comp152634_c0_seq1;Dir=indeterminatecoverage=90.0;identity=95.7;matches=509;mismatches=11;indels=12;unknowns=0;Target=comp152634_c0_seq1 537 8 .;CDS_Target=comp152634_c0_seq1 304 224 .;locus=RLOC_00022586
Chr2	stalkie_big_nohaplotig	exon	147988034	147988555	95	+	.	Parent=comp152634_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	147988240	147988320	.	+	0	Parent=comp152634_c0_seq1.mrna1
Chr2	gffcl	locus	147996892	147999601	.	+	.	ID=RLOC_00022587;geneIDs=comp50965_c0_seq1.path1;transcripts=comp50965_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147996892	147999601	.	+	.	ID=comp50965_c0_seq1.mrna1;geneID=comp50965_c0_seq1.path1;Name=comp50965_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=380;mismatches=0;indels=0;unknowns=0;Target=comp50965_c0_seq1 301 378 .;locus=RLOC_00022587
Chr2	stalkie_big_nohaplotig	exon	147996892	147997108	100	+	.	Parent=comp50965_c0_seq1.mrna1;Target=comp50965_c0_seq1 164 380 -
Chr2	stalkie_big_nohaplotig	exon	147999439	147999601	100	+	.	Parent=comp50965_c0_seq1.mrna1;Target=comp50965_c0_seq1 1 163 -
Chr2	stalkie_big_nohaplotig	CDS	147996894	147996971	.	+	0	Parent=comp50965_c0_seq1.mrna1
Chr2	gffcl	locus	147997201	148145630	.	-	.	ID=RLOC_00022588;geneIDs=FBgn0031081.1.path1,comp161945_c4_seq1.path1;transcripts=FBgn0031081.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	147997372	148145630	.	-	.	ID=FBgn0031081.1.mrna1;geneID=FBgn0031081.1.path1;Name=FBgn0031081.1;Dir=sensecoverage=55.9;identity=98.9;matches=1228;mismatches=5;indels=9;unknowns=0;locus=RLOC_00022588
Chr2	stalkie_big_nohaplotig	exon	147997372	147997545	100	-	.	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 2056 2229 +
Chr2	stalkie_big_nohaplotig	exon	147998037	147998179	100	-	.	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1913 2055 +
Chr2	stalkie_big_nohaplotig	exon	147998371	147999200	100	-	.	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1083 1912 +
Chr2	stalkie_big_nohaplotig	exon	148028558	148028580	47	-	.	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1069 1082 +
Chr2	stalkie_big_nohaplotig	exon	148032603	148032610	100	-	.	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1061 1068 +
Chr2	stalkie_big_nohaplotig	exon	148038922	148038923	100	-	.	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1059 1060 +
Chr2	stalkie_big_nohaplotig	exon	148045608	148045610	100	-	.	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1056 1058 +
Chr2	stalkie_big_nohaplotig	exon	148064836	148064842	100	-	.	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1049 1055 +
Chr2	stalkie_big_nohaplotig	exon	148071138	148071141	100	-	.	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1045 1048 +
Chr2	stalkie_big_nohaplotig	exon	148074328	148074331	100	-	.	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1041 1044 +
Chr2	stalkie_big_nohaplotig	exon	148080902	148080908	100	-	.	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1034 1040 +
Chr2	stalkie_big_nohaplotig	exon	148085483	148085486	100	-	.	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1030 1033 +
Chr2	stalkie_big_nohaplotig	exon	148115919	148115922	100	-	.	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1026 1029 +
Chr2	stalkie_big_nohaplotig	exon	148123918	148123923	100	-	.	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1020 1025 +
Chr2	stalkie_big_nohaplotig	exon	148129078	148129087	80	-	.	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1010 1019 +
Chr2	stalkie_big_nohaplotig	exon	148145619	148145630	100	-	.	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 985 996 +
Chr2	stalkie_big_nohaplotig	CDS	147997372	147997545	.	-	1	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 2056 2229 +
Chr2	stalkie_big_nohaplotig	CDS	147998037	147998179	.	-	0	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1913 2055 +
Chr2	stalkie_big_nohaplotig	CDS	147998371	147999200	.	-	2	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1083 1912 +
Chr2	stalkie_big_nohaplotig	CDS	148028558	148028580	.	-	1	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1069 1082 +
Chr2	stalkie_big_nohaplotig	CDS	148032603	148032610	.	-	0	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1061 1068 +
Chr2	stalkie_big_nohaplotig	CDS	148038922	148038923	.	-	2	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1059 1060 +
Chr2	stalkie_big_nohaplotig	CDS	148045608	148045610	.	-	2	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1056 1058 +
Chr2	stalkie_big_nohaplotig	CDS	148064836	148064842	.	-	0	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1049 1055 +
Chr2	stalkie_big_nohaplotig	CDS	148071138	148071141	.	-	1	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1045 1048 +
Chr2	stalkie_big_nohaplotig	CDS	148074328	148074331	.	-	2	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1041 1044 +
Chr2	stalkie_big_nohaplotig	CDS	148080902	148080908	.	-	0	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1034 1040 +
Chr2	stalkie_big_nohaplotig	CDS	148085483	148085486	.	-	1	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1030 1033 +
Chr2	stalkie_big_nohaplotig	CDS	148115919	148115922	.	-	2	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1026 1029 +
Chr2	stalkie_big_nohaplotig	CDS	148123918	148123923	.	-	2	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1020 1025 +
Chr2	stalkie_big_nohaplotig	CDS	148129078	148129087	.	-	0	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 1010 1019 +
Chr2	stalkie_big_nohaplotig	CDS	148145619	148145630	.	-	0	Parent=FBgn0031081.1.mrna1;Target=FBgn0031081.1 985 996 +
Chr2	gffcl	locus	147999769	148000125	.	+	.	ID=RLOC_00022589;geneIDs=comp81339_c0_seq1.path2;transcripts=comp81339_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	147999769	148000125	.	+	.	ID=comp81339_c0_seq1.mrna2;geneID=comp81339_c0_seq1.path2;Name=comp81339_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=356;mismatches=1;indels=0;unknowns=0;Target=comp81339_c0_seq1 357 1 .;CDS_Target=comp81339_c0_seq1 81 1 .;locus=RLOC_00022589
Chr2	stalkie_big_nohaplotig	exon	147999769	148000125	99	+	.	Parent=comp81339_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	147999769	147999849	.	+	0	Parent=comp81339_c0_seq1.mrna2
Chr2	gffcl	locus	148236813	148237147	.	-	.	ID=RLOC_00022590;geneIDs=comp469276_c0_seq1.path1;transcripts=comp469276_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148236813	148237147	.	-	.	ID=comp469276_c0_seq1.mrna1;geneID=comp469276_c0_seq1.path1;Name=comp469276_c0_seq1;Dir=indeterminatecoverage=95.4;identity=100.0;matches=335;mismatches=0;indels=0;unknowns=0;Target=comp469276_c0_seq1 335 1 .;CDS_Target=comp469276_c0_seq1 225 106 .;locus=RLOC_00022590
Chr2	stalkie_big_nohaplotig	exon	148236813	148237147	100	-	.	Parent=comp469276_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	148236923	148237042	.	-	0	Parent=comp469276_c0_seq1.mrna1
Chr2	gffcl	locus	148237896	148238684	.	+	.	ID=RLOC_00022591;geneIDs=comp135841_c0_seq1.path1;transcripts=comp135841_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148237896	148238684	.	+	.	ID=comp135841_c0_seq1.mrna1;geneID=comp135841_c0_seq1.path1;Name=comp135841_c0_seq1;Dir=indeterminatecoverage=94.3;identity=99.2;matches=785;mismatches=4;indels=2;unknowns=0;Target=comp135841_c0_seq1 821 31 .;CDS_Target=comp135841_c0_seq1 281 225 .;locus=RLOC_00022591
Chr2	stalkie_big_nohaplotig	exon	148237896	148238684	99	+	.	Parent=comp135841_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	148238090	148238145	.	+	0	Parent=comp135841_c0_seq1.mrna1
Chr2	gffcl	locus	148239972	148242563	.	-	.	ID=RLOC_00022592;geneIDs=comp160742_c0_seq1.path1,comp162551_c0_seq1.path1;transcripts=comp162551_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148239972	148241617	.	-	.	ID=comp162551_c0_seq1.mrna1;geneID=comp162551_c0_seq1.path1;Name=comp162551_c0_seq1;Dir=indeterminatecoverage=99.9;identity=98.6;matches=1623;mismatches=21;indels=2;unknowns=0;Target=comp162551_c0_seq1 1646 3 .;CDS_Target=comp162551_c0_seq1 741 664 .;locus=RLOC_00022592
Chr2	stalkie_big_nohaplotig	exon	148239972	148241617	98	-	.	Parent=comp162551_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	148240877	148240955	.	-	0	Parent=comp162551_c0_seq1.mrna1
Chr2	gffcl	locus	148242954	148243409	.	+	.	ID=RLOC_00022593;geneIDs=comp129911_c0_seq1.path1;transcripts=comp129911_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148242954	148243409	.	+	.	ID=comp129911_c0_seq1.mrna1;geneID=comp129911_c0_seq1.path1;Name=comp129911_c0_seq1;Dir=indeterminatecoverage=97.7;identity=99.6;matches=456;mismatches=0;indels=2;unknowns=0;Target=comp129911_c0_seq1 458 1 .;CDS_Target=comp129911_c0_seq1 119 3 .;locus=RLOC_00022593
Chr2	stalkie_big_nohaplotig	exon	148242954	148243409	99	+	.	Parent=comp129911_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	148242956	148243072	.	+	0	Parent=comp129911_c0_seq1.mrna1
Chr2	gffcl	locus	148252591	148253579	.	-	.	ID=RLOC_00022594;geneIDs=comp155535_c0_seq1.path1;transcripts=comp155535_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148252591	148253579	.	-	.	ID=comp155535_c0_seq1.mrna1;geneID=comp155535_c0_seq1.path1;Name=comp155535_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.2;matches=943;mismatches=42;indels=6;unknowns=0;Target=comp155535_c0_seq1 987 1 .;CDS_Target=comp155535_c0_seq1 944 864 .;locus=RLOC_00022594
Chr2	stalkie_big_nohaplotig	exon	148252591	148253579	95	-	.	Parent=comp155535_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	148252634	148252714	.	-	0	Parent=comp155535_c0_seq1.mrna1
Chr2	gffcl	locus	148330219	148330744	.	-	.	ID=RLOC_00022595;geneIDs=comp135011_c0_seq1.path1;transcripts=comp135011_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148330219	148330744	.	-	.	ID=comp135011_c0_seq1.mrna1;geneID=comp135011_c0_seq1.path1;Name=comp135011_c0_seq1;Dir=indeterminatecoverage=96.7;identity=99.6;matches=524;mismatches=2;indels=0;unknowns=0;Target=comp135011_c0_seq1 528 3 .;CDS_Target=comp135011_c0_seq1 48 4 .;locus=RLOC_00022595
Chr2	stalkie_big_nohaplotig	exon	148330219	148330744	99	-	.	Parent=comp135011_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	148330699	148330743	.	-	0	Parent=comp135011_c0_seq1.mrna1
Chr2	gffcl	locus	148416848	148418145	.	-	.	ID=RLOC_00022596;geneIDs=ORF1527.path1;transcripts=ORF1527.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148416848	148418145	.	-	.	ID=ORF1527.mrna1;geneID=ORF1527.path1;Name=ORF1527;Dir=sensecoverage=99.8;identity=98.9;matches=1057;mismatches=12;indels=0;unknowns=0;locus=RLOC_00022596
Chr2	stalkie_big_nohaplotig	exon	148416848	148416884	100	-	.	Parent=ORF1527.mrna1;Target=ORF1527 1033 1069 +
Chr2	stalkie_big_nohaplotig	exon	148416944	148417109	98	-	.	Parent=ORF1527.mrna1;Target=ORF1527 867 1032 +
Chr2	stalkie_big_nohaplotig	exon	148417191	148417648	98	-	.	Parent=ORF1527.mrna1;Target=ORF1527 409 866 +
Chr2	stalkie_big_nohaplotig	exon	148417738	148418145	99	-	.	Parent=ORF1527.mrna1;Target=ORF1527 1 408 +
Chr2	stalkie_big_nohaplotig	CDS	148416849	148416884	.	-	0	Parent=ORF1527.mrna1;Target=ORF1527 1033 1068 +
Chr2	stalkie_big_nohaplotig	CDS	148416944	148417109	.	-	1	Parent=ORF1527.mrna1;Target=ORF1527 867 1032 +
Chr2	stalkie_big_nohaplotig	CDS	148417191	148417648	.	-	0	Parent=ORF1527.mrna1;Target=ORF1527 409 866 +
Chr2	stalkie_big_nohaplotig	CDS	148417738	148418145	.	-	0	Parent=ORF1527.mrna1;Target=ORF1527 1 408 +
Chr2	gffcl	locus	148457367	148459456	.	+	.	ID=RLOC_00022597;geneIDs=ORF596.path1;transcripts=ORF596.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148457367	148459456	.	+	.	ID=ORF596.mrna1;geneID=ORF596.path1;Name=ORF596;Dir=sensecoverage=100.0;identity=99.6;matches=1623;mismatches=6;indels=0;unknowns=0;locus=RLOC_00022597
Chr2	stalkie_big_nohaplotig	exon	148457367	148457531	100	+	.	Parent=ORF596.mrna1;Target=ORF596 1 165 +
Chr2	stalkie_big_nohaplotig	exon	148457866	148459049	99	+	.	Parent=ORF596.mrna1;Target=ORF596 166 1349 +
Chr2	stalkie_big_nohaplotig	exon	148459113	148459257	100	+	.	Parent=ORF596.mrna1;Target=ORF596 1350 1494 +
Chr2	stalkie_big_nohaplotig	exon	148459322	148459456	100	+	.	Parent=ORF596.mrna1;Target=ORF596 1495 1629 +
Chr2	stalkie_big_nohaplotig	CDS	148457367	148457531	.	+	0	Parent=ORF596.mrna1;Target=ORF596 1 165 +
Chr2	stalkie_big_nohaplotig	CDS	148457866	148459049	.	+	0	Parent=ORF596.mrna1;Target=ORF596 166 1349 +
Chr2	stalkie_big_nohaplotig	CDS	148459113	148459257	.	+	1	Parent=ORF596.mrna1;Target=ORF596 1350 1494 +
Chr2	stalkie_big_nohaplotig	CDS	148459322	148459456	.	+	0	Parent=ORF596.mrna1;Target=ORF596 1495 1629 +
Chr2	gffcl	locus	148472953	148475364	.	-	.	ID=RLOC_00022598;geneIDs=ORF214.path1;transcripts=ORF214.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148472953	148475364	.	-	.	ID=ORF214.mrna1;geneID=ORF214.path1;Name=ORF214;Dir=indeterminatecoverage=100.0;identity=99.4;matches=2397;mismatches=15;indels=0;unknowns=0;Target=ORF214 2412 1 .;locus=RLOC_00022598
Chr2	stalkie_big_nohaplotig	exon	148472953	148475364	99	-	.	Parent=ORF214.mrna1
Chr2	stalkie_big_nohaplotig	CDS	148472953	148475364	.	-	0	Parent=ORF214.mrna1
Chr2	gffcl	locus	148493011	148494352	.	-	.	ID=RLOC_00022599;geneIDs=comp114354_c1_seq1.path1;transcripts=comp114354_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148493011	148494352	.	-	.	ID=comp114354_c1_seq1.mrna1;geneID=comp114354_c1_seq1.path1;Name=comp114354_c1_seq1;Dir=antisensecoverage=100.0;identity=98.6;matches=353;mismatches=5;indels=0;unknowns=0;Target=comp114354_c1_seq1 323 358 .;locus=RLOC_00022599
Chr2	stalkie_big_nohaplotig	exon	148493011	148493328	100	-	.	Parent=comp114354_c1_seq1.mrna1;Target=comp114354_c1_seq1 1 318 -
Chr2	stalkie_big_nohaplotig	exon	148494313	148494352	87	-	.	Parent=comp114354_c1_seq1.mrna1;Target=comp114354_c1_seq1 319 358 -
Chr2	stalkie_big_nohaplotig	CDS	148494317	148494352	.	-	0	Parent=comp114354_c1_seq1.mrna1
Chr2	gffcl	locus	148559693	148567533	.	+	.	ID=RLOC_00022600;geneIDs=FBgn0028670.2.path1,comp134695_c0_seq1.path1;transcripts=comp134695_c0_seq1.mrna1,FBgn0028670.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148559693	148564745	.	+	.	ID=comp134695_c0_seq1.mrna1;geneID=comp134695_c0_seq1.path1;Name=comp134695_c0_seq1;Dir=sensecoverage=100.0;identity=97.8;matches=442;mismatches=1;indels=9;unknowns=0;Target=comp134695_c0_seq1 2 94 +;locus=RLOC_00022600
Chr2	stalkie_big_nohaplotig	exon	148559693	148560120	97	+	.	Parent=comp134695_c0_seq1.mrna1;Target=comp134695_c0_seq1 1 419 +
Chr2	stalkie_big_nohaplotig	exon	148564722	148564745	100	+	.	Parent=comp134695_c0_seq1.mrna1;Target=comp134695_c0_seq1 420 443 +
Chr2	stalkie_big_nohaplotig	CDS	148559694	148559786	.	+	0	Parent=comp134695_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148564729	148567533	.	+	.	ID=FBgn0028670.2.mrna1;geneID=FBgn0028670.2.path1;Name=FBgn0028670.2;Dir=sensecoverage=100.0;identity=99.5;matches=2504;mismatches=13;indels=0;unknowns=0;locus=RLOC_00022600
Chr2	stalkie_big_nohaplotig	exon	148564729	148564860	99	+	.	Parent=FBgn0028670.2.mrna1;Target=FBgn0028670.2 1 132 +
Chr2	stalkie_big_nohaplotig	exon	148564931	148566814	99	+	.	Parent=FBgn0028670.2.mrna1;Target=FBgn0028670.2 133 2016 +
Chr2	stalkie_big_nohaplotig	exon	148566880	148567117	100	+	.	Parent=FBgn0028670.2.mrna1;Target=FBgn0028670.2 2017 2254 +
Chr2	stalkie_big_nohaplotig	exon	148567192	148567363	98	+	.	Parent=FBgn0028670.2.mrna1;Target=FBgn0028670.2 2255 2426 +
Chr2	stalkie_big_nohaplotig	exon	148567443	148567533	100	+	.	Parent=FBgn0028670.2.mrna1;Target=FBgn0028670.2 2427 2517 +
Chr2	stalkie_big_nohaplotig	CDS	148564729	148564860	.	+	0	Parent=FBgn0028670.2.mrna1;Target=FBgn0028670.2 1 132 +
Chr2	stalkie_big_nohaplotig	CDS	148564931	148566814	.	+	0	Parent=FBgn0028670.2.mrna1;Target=FBgn0028670.2 133 2016 +
Chr2	stalkie_big_nohaplotig	CDS	148566880	148567117	.	+	0	Parent=FBgn0028670.2.mrna1;Target=FBgn0028670.2 2017 2254 +
Chr2	stalkie_big_nohaplotig	CDS	148567192	148567363	.	+	2	Parent=FBgn0028670.2.mrna1;Target=FBgn0028670.2 2255 2426 +
Chr2	stalkie_big_nohaplotig	CDS	148567443	148567533	.	+	1	Parent=FBgn0028670.2.mrna1;Target=FBgn0028670.2 2427 2517 +
Chr2	gffcl	locus	148578173	148580285	.	+	.	ID=RLOC_00022601;geneIDs=FBgn0028670.3.path1;transcripts=FBgn0028670.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148578173	148580285	.	+	.	ID=FBgn0028670.3.mrna1;geneID=FBgn0028670.3.path1;Name=FBgn0028670.3;Dir=sensecoverage=100.0;identity=99.5;matches=1914;mismatches=9;indels=0;unknowns=0;locus=RLOC_00022601
Chr2	stalkie_big_nohaplotig	exon	148578173	148579630	99	+	.	Parent=FBgn0028670.3.mrna1;Target=FBgn0028670.3 1 1458 +
Chr2	stalkie_big_nohaplotig	exon	148579698	148579896	100	+	.	Parent=FBgn0028670.3.mrna1;Target=FBgn0028670.3 1459 1657 +
Chr2	stalkie_big_nohaplotig	exon	148579953	148580127	99	+	.	Parent=FBgn0028670.3.mrna1;Target=FBgn0028670.3 1658 1832 +
Chr2	stalkie_big_nohaplotig	exon	148580195	148580285	97	+	.	Parent=FBgn0028670.3.mrna1;Target=FBgn0028670.3 1833 1923 +
Chr2	stalkie_big_nohaplotig	CDS	148578173	148579630	.	+	0	Parent=FBgn0028670.3.mrna1;Target=FBgn0028670.3 1 1458 +
Chr2	stalkie_big_nohaplotig	CDS	148579698	148579896	.	+	0	Parent=FBgn0028670.3.mrna1;Target=FBgn0028670.3 1459 1657 +
Chr2	stalkie_big_nohaplotig	CDS	148579953	148580127	.	+	2	Parent=FBgn0028670.3.mrna1;Target=FBgn0028670.3 1658 1832 +
Chr2	stalkie_big_nohaplotig	CDS	148580195	148580285	.	+	1	Parent=FBgn0028670.3.mrna1;Target=FBgn0028670.3 1833 1923 +
Chr2	gffcl	locus	148595771	148596698	.	+	.	ID=RLOC_00022602;geneIDs=FBgn0038610.1.path2;transcripts=FBgn0038610.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	148595771	148596698	.	+	.	ID=FBgn0038610.1.mrna2;geneID=FBgn0038610.1.path2;Name=FBgn0038610.1;Dir=sensecoverage=99.2;identity=99.4;matches=864;mismatches=5;indels=0;unknowns=0;locus=RLOC_00022602
Chr2	stalkie_big_nohaplotig	exon	148595771	148595911	98	+	.	Parent=FBgn0038610.1.mrna2;Target=FBgn0038610.1 8 148 +
Chr2	stalkie_big_nohaplotig	exon	148595971	148596698	99	+	.	Parent=FBgn0038610.1.mrna2;Target=FBgn0038610.1 149 876 +
Chr2	stalkie_big_nohaplotig	CDS	148595773	148595911	.	+	0	Parent=FBgn0038610.1.mrna2;Target=FBgn0038610.1 10 148 +
Chr2	stalkie_big_nohaplotig	CDS	148595971	148596698	.	+	2	Parent=FBgn0038610.1.mrna2;Target=FBgn0038610.1 149 876 +
Chr2	gffcl	locus	148605689	148605929	.	+	.	ID=RLOC_00022603;geneIDs=comp163503_c1_seq1.path2;transcripts=comp163503_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	148605689	148605929	.	+	.	ID=comp163503_c1_seq1.mrna2;geneID=comp163503_c1_seq1.path2;Name=comp163503_c1_seq1;Dir=antisensecoverage=14.7;identity=97.3;matches=181;mismatches=5;indels=0;unknowns=0;locus=RLOC_00022603
Chr2	stalkie_big_nohaplotig	exon	148605689	148605780	96	+	.	Parent=comp163503_c1_seq1.mrna2;Target=comp163503_c1_seq1 1174 1265 -
Chr2	stalkie_big_nohaplotig	exon	148605836	148605929	97	+	.	Parent=comp163503_c1_seq1.mrna2;Target=comp163503_c1_seq1 1080 1173 -
Chr2	gffcl	locus	148608599	148610263	.	+	.	ID=RLOC_00022604;geneIDs=FBgn0261387.7.path1;transcripts=FBgn0261387.7.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148608599	148610263	.	+	.	ID=FBgn0261387.7.mrna1;geneID=FBgn0261387.7.path1;Name=FBgn0261387.7;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1654;mismatches=11;indels=0;unknowns=0;Target=FBgn0261387.7 1665 1 .;locus=RLOC_00022604
Chr2	stalkie_big_nohaplotig	exon	148608599	148610263	99	+	.	Parent=FBgn0261387.7.mrna1
Chr2	stalkie_big_nohaplotig	CDS	148608599	148610263	.	+	0	Parent=FBgn0261387.7.mrna1
Chr2	gffcl	locus	148614646	148616236	.	-	.	ID=RLOC_00022605;geneIDs=comp160700_c0_seq1.path1;transcripts=comp160700_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148614646	148616236	.	-	.	ID=comp160700_c0_seq1.mrna1;geneID=comp160700_c0_seq1.path1;Name=comp160700_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.1;matches=1577;mismatches=13;indels=2;unknowns=0;Target=comp160700_c0_seq1 1592 2 .;CDS_Target=comp160700_c0_seq1 1286 1179 .;locus=RLOC_00022605
Chr2	stalkie_big_nohaplotig	exon	148614646	148616236	99	-	.	Parent=comp160700_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	148614951	148615058	.	-	0	Parent=comp160700_c0_seq1.mrna1
Chr2	gffcl	locus	148618110	148620348	.	-	.	ID=RLOC_00022606;geneIDs=FBgn0037556.1.path1;transcripts=FBgn0037556.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148618110	148620348	.	-	.	ID=FBgn0037556.1.mrna1;geneID=FBgn0037556.1.path1;Name=FBgn0037556.1;Dir=sensecoverage=100.0;identity=99.5;matches=809;mismatches=3;indels=1;unknowns=0;locus=RLOC_00022606
Chr2	stalkie_big_nohaplotig	exon	148618110	148618202	98	-	.	Parent=FBgn0037556.1.mrna1;Target=FBgn0037556.1 720 813 +
Chr2	stalkie_big_nohaplotig	exon	148618258	148618424	100	-	.	Parent=FBgn0037556.1.mrna1;Target=FBgn0037556.1 553 719 +
Chr2	stalkie_big_nohaplotig	exon	148619730	148619964	99	-	.	Parent=FBgn0037556.1.mrna1;Target=FBgn0037556.1 318 552 +
Chr2	stalkie_big_nohaplotig	exon	148620032	148620348	99	-	.	Parent=FBgn0037556.1.mrna1;Target=FBgn0037556.1 1 317 +
Chr2	stalkie_big_nohaplotig	CDS	148618110	148618202	.	-	1	Parent=FBgn0037556.1.mrna1;Target=FBgn0037556.1 720 813 +
Chr2	stalkie_big_nohaplotig	CDS	148618258	148618424	.	-	0	Parent=FBgn0037556.1.mrna1;Target=FBgn0037556.1 553 719 +
Chr2	stalkie_big_nohaplotig	CDS	148619730	148619964	.	-	1	Parent=FBgn0037556.1.mrna1;Target=FBgn0037556.1 318 552 +
Chr2	stalkie_big_nohaplotig	CDS	148620032	148620348	.	-	0	Parent=FBgn0037556.1.mrna1;Target=FBgn0037556.1 1 317 +
Chr2	gffcl	locus	148622475	148627184	.	+	.	ID=RLOC_00022607;geneIDs=FBgn0022338.1.path1;transcripts=FBgn0022338.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148622475	148627184	.	+	.	ID=FBgn0022338.1.mrna1;geneID=FBgn0022338.1.path1;Name=FBgn0022338.1;Dir=sensecoverage=100.0;identity=99.4;matches=793;mismatches=5;indels=0;unknowns=0;locus=RLOC_00022607
Chr2	stalkie_big_nohaplotig	exon	148622475	148622511	100	+	.	Parent=FBgn0022338.1.mrna1;Target=FBgn0022338.1 1 37 +
Chr2	stalkie_big_nohaplotig	exon	148625724	148625935	99	+	.	Parent=FBgn0022338.1.mrna1;Target=FBgn0022338.1 38 249 +
Chr2	stalkie_big_nohaplotig	exon	148625992	148626125	97	+	.	Parent=FBgn0022338.1.mrna1;Target=FBgn0022338.1 250 383 +
Chr2	stalkie_big_nohaplotig	exon	148626638	148626756	100	+	.	Parent=FBgn0022338.1.mrna1;Target=FBgn0022338.1 384 502 +
Chr2	stalkie_big_nohaplotig	exon	148626823	148626974	100	+	.	Parent=FBgn0022338.1.mrna1;Target=FBgn0022338.1 503 654 +
Chr2	stalkie_big_nohaplotig	exon	148627041	148627184	99	+	.	Parent=FBgn0022338.1.mrna1;Target=FBgn0022338.1 655 798 +
Chr2	stalkie_big_nohaplotig	CDS	148622475	148622511	.	+	0	Parent=FBgn0022338.1.mrna1;Target=FBgn0022338.1 1 37 +
Chr2	stalkie_big_nohaplotig	CDS	148625724	148625935	.	+	2	Parent=FBgn0022338.1.mrna1;Target=FBgn0022338.1 38 249 +
Chr2	stalkie_big_nohaplotig	CDS	148625992	148626125	.	+	0	Parent=FBgn0022338.1.mrna1;Target=FBgn0022338.1 250 383 +
Chr2	stalkie_big_nohaplotig	CDS	148626638	148626756	.	+	1	Parent=FBgn0022338.1.mrna1;Target=FBgn0022338.1 384 502 +
Chr2	stalkie_big_nohaplotig	CDS	148626823	148626974	.	+	2	Parent=FBgn0022338.1.mrna1;Target=FBgn0022338.1 503 654 +
Chr2	stalkie_big_nohaplotig	CDS	148627041	148627184	.	+	0	Parent=FBgn0022338.1.mrna1;Target=FBgn0022338.1 655 798 +
Chr2	gffcl	locus	148628842	148631584	.	+	.	ID=RLOC_00022608;geneIDs=FBgn0038473.1.path1,comp161506_c0_seq1.path2;transcripts=FBgn0038473.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148628844	148631584	.	+	.	ID=FBgn0038473.1.mrna1;geneID=FBgn0038473.1.path1;Name=FBgn0038473.1;Dir=sensecoverage=100.0;identity=99.2;matches=1872;mismatches=15;indels=0;unknowns=0;locus=RLOC_00022608
Chr2	stalkie_big_nohaplotig	exon	148628844	148628982	98	+	.	Parent=FBgn0038473.1.mrna1;Target=FBgn0038473.1 1 139 +
Chr2	stalkie_big_nohaplotig	exon	148629040	148629386	99	+	.	Parent=FBgn0038473.1.mrna1;Target=FBgn0038473.1 140 486 +
Chr2	stalkie_big_nohaplotig	exon	148629445	148629980	99	+	.	Parent=FBgn0038473.1.mrna1;Target=FBgn0038473.1 487 1022 +
Chr2	stalkie_big_nohaplotig	exon	148630050	148630303	99	+	.	Parent=FBgn0038473.1.mrna1;Target=FBgn0038473.1 1023 1276 +
Chr2	stalkie_big_nohaplotig	exon	148630918	148631355	98	+	.	Parent=FBgn0038473.1.mrna1;Target=FBgn0038473.1 1277 1714 +
Chr2	stalkie_big_nohaplotig	exon	148631412	148631584	100	+	.	Parent=FBgn0038473.1.mrna1;Target=FBgn0038473.1 1715 1887 +
Chr2	stalkie_big_nohaplotig	CDS	148628844	148628982	.	+	0	Parent=FBgn0038473.1.mrna1;Target=FBgn0038473.1 1 139 +
Chr2	stalkie_big_nohaplotig	CDS	148629040	148629386	.	+	2	Parent=FBgn0038473.1.mrna1;Target=FBgn0038473.1 140 486 +
Chr2	stalkie_big_nohaplotig	CDS	148629445	148629980	.	+	0	Parent=FBgn0038473.1.mrna1;Target=FBgn0038473.1 487 1022 +
Chr2	stalkie_big_nohaplotig	CDS	148630050	148630303	.	+	1	Parent=FBgn0038473.1.mrna1;Target=FBgn0038473.1 1023 1276 +
Chr2	stalkie_big_nohaplotig	CDS	148630918	148631355	.	+	2	Parent=FBgn0038473.1.mrna1;Target=FBgn0038473.1 1277 1714 +
Chr2	stalkie_big_nohaplotig	CDS	148631412	148631584	.	+	2	Parent=FBgn0038473.1.mrna1;Target=FBgn0038473.1 1715 1887 +
Chr2	gffcl	locus	148631756	148635782	.	+	.	ID=RLOC_00022609;geneIDs=FBgn0086916.1.path1;transcripts=FBgn0086916.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148631756	148635782	.	+	.	ID=FBgn0086916.1.mrna1;geneID=FBgn0086916.1.path1;Name=FBgn0086916.1;Dir=sensecoverage=100.0;identity=99.3;matches=2621;mismatches=19;indels=0;unknowns=3;locus=RLOC_00022609
Chr2	stalkie_big_nohaplotig	exon	148631756	148632011	99	+	.	Parent=FBgn0086916.1.mrna1;Target=FBgn0086916.1 1 256 +
Chr2	stalkie_big_nohaplotig	exon	148632070	148632189	99	+	.	Parent=FBgn0086916.1.mrna1;Target=FBgn0086916.1 257 376 +
Chr2	stalkie_big_nohaplotig	exon	148632245	148632887	99	+	.	Parent=FBgn0086916.1.mrna1;Target=FBgn0086916.1 377 1019 +
Chr2	stalkie_big_nohaplotig	exon	148633789	148633910	99	+	.	Parent=FBgn0086916.1.mrna1;Target=FBgn0086916.1 1020 1141 +
Chr2	stalkie_big_nohaplotig	exon	148633965	148634095	100	+	.	Parent=FBgn0086916.1.mrna1;Target=FBgn0086916.1 1142 1272 +
Chr2	stalkie_big_nohaplotig	exon	148634175	148634393	100	+	.	Parent=FBgn0086916.1.mrna1;Target=FBgn0086916.1 1273 1491 +
Chr2	stalkie_big_nohaplotig	exon	148634452	148634579	99	+	.	Parent=FBgn0086916.1.mrna1;Target=FBgn0086916.1 1492 1619 +
Chr2	stalkie_big_nohaplotig	exon	148634635	148634878	98	+	.	Parent=FBgn0086916.1.mrna1;Target=FBgn0086916.1 1620 1863 +
Chr2	stalkie_big_nohaplotig	exon	148634940	148635030	100	+	.	Parent=FBgn0086916.1.mrna1;Target=FBgn0086916.1 1864 1954 +
Chr2	stalkie_big_nohaplotig	exon	148635094	148635782	98	+	.	Parent=FBgn0086916.1.mrna1;Target=FBgn0086916.1 1955 2643 +
Chr2	stalkie_big_nohaplotig	CDS	148631756	148632011	.	+	0	Parent=FBgn0086916.1.mrna1;Target=FBgn0086916.1 1 256 +
Chr2	stalkie_big_nohaplotig	CDS	148632070	148632189	.	+	2	Parent=FBgn0086916.1.mrna1;Target=FBgn0086916.1 257 376 +
Chr2	stalkie_big_nohaplotig	CDS	148632245	148632887	.	+	2	Parent=FBgn0086916.1.mrna1;Target=FBgn0086916.1 377 1019 +
Chr2	stalkie_big_nohaplotig	CDS	148633789	148633910	.	+	1	Parent=FBgn0086916.1.mrna1;Target=FBgn0086916.1 1020 1141 +
Chr2	stalkie_big_nohaplotig	CDS	148633965	148634095	.	+	2	Parent=FBgn0086916.1.mrna1;Target=FBgn0086916.1 1142 1272 +
Chr2	stalkie_big_nohaplotig	CDS	148634175	148634393	.	+	0	Parent=FBgn0086916.1.mrna1;Target=FBgn0086916.1 1273 1491 +
Chr2	stalkie_big_nohaplotig	CDS	148634452	148634579	.	+	0	Parent=FBgn0086916.1.mrna1;Target=FBgn0086916.1 1492 1619 +
Chr2	stalkie_big_nohaplotig	CDS	148634635	148634878	.	+	1	Parent=FBgn0086916.1.mrna1;Target=FBgn0086916.1 1620 1863 +
Chr2	stalkie_big_nohaplotig	CDS	148634940	148635030	.	+	0	Parent=FBgn0086916.1.mrna1;Target=FBgn0086916.1 1864 1954 +
Chr2	stalkie_big_nohaplotig	CDS	148635094	148635782	.	+	2	Parent=FBgn0086916.1.mrna1;Target=FBgn0086916.1 1955 2643 +
Chr2	gffcl	locus	148636724	148637180	.	-	.	ID=RLOC_00022610;geneIDs=comp26150_c0_seq1.path1;transcripts=comp26150_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148636724	148637180	.	-	.	ID=comp26150_c0_seq1.mrna1;geneID=comp26150_c0_seq1.path1;Name=comp26150_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.1;matches=440;mismatches=15;indels=3;unknowns=0;Target=comp26150_c0_seq1 456 1 .;CDS_Target=comp26150_c0_seq1 229 140 .;locus=RLOC_00022610
Chr2	stalkie_big_nohaplotig	exon	148636724	148637180	96	-	.	Parent=comp26150_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	148636951	148637040	.	-	0	Parent=comp26150_c0_seq1.mrna1
Chr2	gffcl	locus	148637388	148639239	.	-	.	ID=RLOC_00022611;geneIDs=comp97146_c0_seq1.path1,comp146794_c0_seq1.path1;transcripts=comp146794_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148637565	148639239	.	-	.	ID=comp146794_c0_seq1.mrna1;geneID=comp146794_c0_seq1.path1;Name=comp146794_c0_seq1;Dir=indeterminatecoverage=98.4;identity=99.5;matches=1111;mismatches=5;indels=1;unknowns=0;locus=RLOC_00022611
Chr2	stalkie_big_nohaplotig	exon	148637565	148638141	99	-	.	Parent=comp146794_c0_seq1.mrna1;Target=comp146794_c0_seq1 1135 558 .
Chr2	stalkie_big_nohaplotig	exon	148638701	148639239	99	-	.	Parent=comp146794_c0_seq1.mrna1;Target=comp146794_c0_seq1 557 19 .
Chr2	stalkie_big_nohaplotig	CDS	148638005	148638141	.	-	2	Parent=comp146794_c0_seq1.mrna1;Target=comp146794_c0_seq1 694 558 .
Chr2	stalkie_big_nohaplotig	CDS	148638701	148638716	.	-	0	Parent=comp146794_c0_seq1.mrna1;Target=comp146794_c0_seq1 557 542 .
Chr2	gffcl	locus	148757526	148759168	.	-	.	ID=RLOC_00022612;geneIDs=comp152321_c0_seq1.path1;transcripts=comp152321_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148757526	148759168	.	-	.	ID=comp152321_c0_seq1.mrna1;geneID=comp152321_c0_seq1.path1;Name=comp152321_c0_seq1;Dir=sensecoverage=99.9;identity=93.3;matches=1315;mismatches=52;indels=42;unknowns=0;Target=comp152321_c0_seq1 4 249 +;locus=RLOC_00022612
Chr2	stalkie_big_nohaplotig	exon	148757526	148757921	82	-	.	Parent=comp152321_c0_seq1.mrna1;Target=comp152321_c0_seq1 986 1397 +
Chr2	stalkie_big_nohaplotig	exon	148758113	148758553	97	-	.	Parent=comp152321_c0_seq1.mrna1;Target=comp152321_c0_seq1 544 985 +
Chr2	stalkie_big_nohaplotig	exon	148758626	148759168	97	-	.	Parent=comp152321_c0_seq1.mrna1;Target=comp152321_c0_seq1 2 543 +
Chr2	stalkie_big_nohaplotig	CDS	148758920	148759166	.	-	0	Parent=comp152321_c0_seq1.mrna1
Chr2	gffcl	locus	148799105	148801265	.	+	.	ID=RLOC_00022613;geneIDs=FBgn0037817.1.path1;transcripts=FBgn0037817.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148799105	148801265	.	+	.	ID=FBgn0037817.1.mrna1;geneID=FBgn0037817.1.path1;Name=FBgn0037817.1;Dir=sensecoverage=98.6;identity=99.1;matches=1600;mismatches=15;indels=0;unknowns=0;locus=RLOC_00022613
Chr2	stalkie_big_nohaplotig	exon	148799105	148799222	100	+	.	Parent=FBgn0037817.1.mrna1;Target=FBgn0037817.1 24 141 +
Chr2	stalkie_big_nohaplotig	exon	148799283	148799382	99	+	.	Parent=FBgn0037817.1.mrna1;Target=FBgn0037817.1 142 241 +
Chr2	stalkie_big_nohaplotig	exon	148799641	148799887	99	+	.	Parent=FBgn0037817.1.mrna1;Target=FBgn0037817.1 242 488 +
Chr2	stalkie_big_nohaplotig	exon	148799966	148800082	100	+	.	Parent=FBgn0037817.1.mrna1;Target=FBgn0037817.1 489 605 +
Chr2	stalkie_big_nohaplotig	exon	148800172	148800622	98	+	.	Parent=FBgn0037817.1.mrna1;Target=FBgn0037817.1 606 1056 +
Chr2	stalkie_big_nohaplotig	exon	148800684	148801265	99	+	.	Parent=FBgn0037817.1.mrna1;Target=FBgn0037817.1 1057 1638 +
Chr2	stalkie_big_nohaplotig	CDS	148799106	148799222	.	+	0	Parent=FBgn0037817.1.mrna1;Target=FBgn0037817.1 25 141 +
Chr2	stalkie_big_nohaplotig	CDS	148799283	148799382	.	+	0	Parent=FBgn0037817.1.mrna1;Target=FBgn0037817.1 142 241 +
Chr2	stalkie_big_nohaplotig	CDS	148799641	148799887	.	+	2	Parent=FBgn0037817.1.mrna1;Target=FBgn0037817.1 242 488 +
Chr2	stalkie_big_nohaplotig	CDS	148799966	148800082	.	+	1	Parent=FBgn0037817.1.mrna1;Target=FBgn0037817.1 489 605 +
Chr2	stalkie_big_nohaplotig	CDS	148800172	148800622	.	+	1	Parent=FBgn0037817.1.mrna1;Target=FBgn0037817.1 606 1056 +
Chr2	stalkie_big_nohaplotig	CDS	148800684	148801265	.	+	0	Parent=FBgn0037817.1.mrna1;Target=FBgn0037817.1 1057 1638 +
Chr2	gffcl	locus	148803043	148805076	.	+	.	ID=RLOC_00022614;geneIDs=FBgn0037817.2.path1;transcripts=FBgn0037817.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148803043	148805076	.	+	.	ID=FBgn0037817.2.mrna1;geneID=FBgn0037817.2.path1;Name=FBgn0037817.2;Dir=sensecoverage=100.0;identity=98.4;matches=1588;mismatches=26;indels=0;unknowns=0;locus=RLOC_00022614
Chr2	stalkie_big_nohaplotig	exon	148803043	148803150	97	+	.	Parent=FBgn0037817.2.mrna1;Target=FBgn0037817.2 1 108 +
Chr2	stalkie_big_nohaplotig	exon	148803284	148803395	96	+	.	Parent=FBgn0037817.2.mrna1;Target=FBgn0037817.2 109 220 +
Chr2	stalkie_big_nohaplotig	exon	148803472	148803718	97	+	.	Parent=FBgn0037817.2.mrna1;Target=FBgn0037817.2 221 467 +
Chr2	stalkie_big_nohaplotig	exon	148803779	148803895	99	+	.	Parent=FBgn0037817.2.mrna1;Target=FBgn0037817.2 468 584 +
Chr2	stalkie_big_nohaplotig	exon	148803981	148804428	98	+	.	Parent=FBgn0037817.2.mrna1;Target=FBgn0037817.2 585 1032 +
Chr2	stalkie_big_nohaplotig	exon	148804495	148805076	99	+	.	Parent=FBgn0037817.2.mrna1;Target=FBgn0037817.2 1033 1614 +
Chr2	stalkie_big_nohaplotig	CDS	148803043	148803150	.	+	0	Parent=FBgn0037817.2.mrna1;Target=FBgn0037817.2 1 108 +
Chr2	stalkie_big_nohaplotig	CDS	148803284	148803395	.	+	0	Parent=FBgn0037817.2.mrna1;Target=FBgn0037817.2 109 220 +
Chr2	stalkie_big_nohaplotig	CDS	148803472	148803718	.	+	2	Parent=FBgn0037817.2.mrna1;Target=FBgn0037817.2 221 467 +
Chr2	stalkie_big_nohaplotig	CDS	148803779	148803895	.	+	1	Parent=FBgn0037817.2.mrna1;Target=FBgn0037817.2 468 584 +
Chr2	stalkie_big_nohaplotig	CDS	148803981	148804428	.	+	1	Parent=FBgn0037817.2.mrna1;Target=FBgn0037817.2 585 1032 +
Chr2	stalkie_big_nohaplotig	CDS	148804495	148805076	.	+	0	Parent=FBgn0037817.2.mrna1;Target=FBgn0037817.2 1033 1614 +
Chr2	gffcl	locus	148805347	148805624	.	-	.	ID=RLOC_00022615;geneIDs=comp118111_c0_seq1.path1;transcripts=comp118111_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148805347	148805624	.	-	.	ID=comp118111_c0_seq1.mrna1;geneID=comp118111_c0_seq1.path1;Name=comp118111_c0_seq1;Dir=indeterminatecoverage=100.0;identity=83.4;matches=256;mismatches=21;indels=30;unknowns=0;Target=comp118111_c0_seq1 306 1 .;CDS_Target=comp118111_c0_seq1 87 1 .;locus=RLOC_00022615
Chr2	stalkie_big_nohaplotig	exon	148805347	148805624	83	-	.	Parent=comp118111_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	148805551	148805624	.	-	0	Parent=comp118111_c0_seq1.mrna1
Chr2	gffcl	locus	148808167	148811609	.	+	.	ID=RLOC_00022616;geneIDs=FBgn0038680.2.path1;transcripts=FBgn0038680.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148808167	148811609	.	+	.	ID=FBgn0038680.2.mrna1;geneID=FBgn0038680.2.path1;Name=FBgn0038680.2;Dir=sensecoverage=100.0;identity=98.8;matches=1600;mismatches=20;indels=0;unknowns=0;locus=RLOC_00022616
Chr2	stalkie_big_nohaplotig	exon	148808167	148808262	100	+	.	Parent=FBgn0038680.2.mrna1;Target=FBgn0038680.2 1 96 +
Chr2	stalkie_big_nohaplotig	exon	148808335	148808440	99	+	.	Parent=FBgn0038680.2.mrna1;Target=FBgn0038680.2 97 202 +
Chr2	stalkie_big_nohaplotig	exon	148809001	148809247	99	+	.	Parent=FBgn0038680.2.mrna1;Target=FBgn0038680.2 203 449 +
Chr2	stalkie_big_nohaplotig	exon	148810388	148810964	98	+	.	Parent=FBgn0038680.2.mrna1;Target=FBgn0038680.2 450 1026 +
Chr2	stalkie_big_nohaplotig	exon	148811016	148811609	98	+	.	Parent=FBgn0038680.2.mrna1;Target=FBgn0038680.2 1027 1620 +
Chr2	stalkie_big_nohaplotig	CDS	148808167	148808262	.	+	0	Parent=FBgn0038680.2.mrna1;Target=FBgn0038680.2 1 96 +
Chr2	stalkie_big_nohaplotig	CDS	148808335	148808440	.	+	0	Parent=FBgn0038680.2.mrna1;Target=FBgn0038680.2 97 202 +
Chr2	stalkie_big_nohaplotig	CDS	148809001	148809247	.	+	2	Parent=FBgn0038680.2.mrna1;Target=FBgn0038680.2 203 449 +
Chr2	stalkie_big_nohaplotig	CDS	148810388	148810964	.	+	1	Parent=FBgn0038680.2.mrna1;Target=FBgn0038680.2 450 1026 +
Chr2	stalkie_big_nohaplotig	CDS	148811016	148811609	.	+	0	Parent=FBgn0038680.2.mrna1;Target=FBgn0038680.2 1027 1620 +
Chr2	gffcl	locus	148837372	148837827	.	-	.	ID=RLOC_00022617;geneIDs=comp148926_c0_seq1.path1;transcripts=comp148926_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148837372	148837827	.	-	.	ID=comp148926_c0_seq1.mrna1;geneID=comp148926_c0_seq1.path1;Name=comp148926_c0_seq1;Dir=sensecoverage=97.9;identity=95.6;matches=350;mismatches=14;indels=2;unknowns=0;locus=RLOC_00022617
Chr2	stalkie_big_nohaplotig	exon	148837372	148837607	94	-	.	Parent=comp148926_c0_seq1.mrna1;Target=comp148926_c0_seq1 129 366 +
Chr2	stalkie_big_nohaplotig	exon	148837700	148837827	97	-	.	Parent=comp148926_c0_seq1.mrna1;Target=comp148926_c0_seq1 1 128 +
Chr2	stalkie_big_nohaplotig	CDS	148837501	148837607	.	-	2	Parent=comp148926_c0_seq1.mrna1;Target=comp148926_c0_seq1 129 235 +
Chr2	stalkie_big_nohaplotig	CDS	148837700	148837724	.	-	0	Parent=comp148926_c0_seq1.mrna1;Target=comp148926_c0_seq1 104 128 +
Chr2	gffcl	locus	148840016	148840474	.	+	.	ID=RLOC_00022618;geneIDs=comp147198_c0_seq1.path1;transcripts=comp147198_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148840016	148840474	.	+	.	ID=comp147198_c0_seq1.mrna1;geneID=comp147198_c0_seq1.path1;Name=comp147198_c0_seq1;Dir=sensecoverage=99.0;identity=99.0;matches=387;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022618
Chr2	stalkie_big_nohaplotig	exon	148840016	148840155	97	+	.	Parent=comp147198_c0_seq1.mrna1;Target=comp147198_c0_seq1 1 140 +
Chr2	stalkie_big_nohaplotig	exon	148840224	148840474	99	+	.	Parent=comp147198_c0_seq1.mrna1;Target=comp147198_c0_seq1 141 391 +
Chr2	stalkie_big_nohaplotig	CDS	148840131	148840155	.	+	0	Parent=comp147198_c0_seq1.mrna1;Target=comp147198_c0_seq1 116 140 +
Chr2	stalkie_big_nohaplotig	CDS	148840224	148840333	.	+	2	Parent=comp147198_c0_seq1.mrna1;Target=comp147198_c0_seq1 141 250 +
Chr2	gffcl	locus	148845435	148846198	.	+	.	ID=RLOC_00022619;geneIDs=comp156331_c0_seq1.path1;transcripts=comp156331_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148845435	148846198	.	+	.	ID=comp156331_c0_seq1.mrna1;geneID=comp156331_c0_seq1.path1;Name=comp156331_c0_seq1;Dir=sensecoverage=96.9;identity=98.6;matches=687;mismatches=9;indels=1;unknowns=0;locus=RLOC_00022619
Chr2	stalkie_big_nohaplotig	exon	148845435	148845916	98	+	.	Parent=comp156331_c0_seq1.mrna1;Target=comp156331_c0_seq1 1 483 +
Chr2	stalkie_big_nohaplotig	exon	148845985	148846198	98	+	.	Parent=comp156331_c0_seq1.mrna1;Target=comp156331_c0_seq1 484 697 +
Chr2	stalkie_big_nohaplotig	CDS	148845892	148845916	.	+	0	Parent=comp156331_c0_seq1.mrna1;Target=comp156331_c0_seq1 459 483 +
Chr2	stalkie_big_nohaplotig	CDS	148845985	148846088	.	+	2	Parent=comp156331_c0_seq1.mrna1;Target=comp156331_c0_seq1 484 587 +
Chr2	gffcl	locus	148861366	148862330	.	-	.	ID=RLOC_00022620;geneIDs=comp711261_c0_seq1.path1;transcripts=comp711261_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148861366	148862330	.	-	.	ID=comp711261_c0_seq1.mrna1;geneID=comp711261_c0_seq1.path1;Name=comp711261_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.1;matches=957;mismatches=3;indels=6;unknowns=0;Target=comp711261_c0_seq1 963 3 .;CDS_Target=comp711261_c0_seq1 92 3 .;locus=RLOC_00022620
Chr2	stalkie_big_nohaplotig	exon	148861366	148862330	99	-	.	Parent=comp711261_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	148862242	148862330	.	-	0	Parent=comp711261_c0_seq1.mrna1
Chr2	gffcl	locus	148870195	148872034	.	+	.	ID=RLOC_00022621;geneIDs=FBgn0037816.1.path1;transcripts=FBgn0037816.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148870195	148872034	.	+	.	ID=FBgn0037816.1.mrna1;geneID=FBgn0037816.1.path1;Name=FBgn0037816.1;Dir=sensecoverage=100.0;identity=99.4;matches=1763;mismatches=10;indels=0;unknowns=0;locus=RLOC_00022621
Chr2	stalkie_big_nohaplotig	exon	148870195	148870720	99	+	.	Parent=FBgn0037816.1.mrna1;Target=FBgn0037816.1 1 526 +
Chr2	stalkie_big_nohaplotig	exon	148870788	148872034	99	+	.	Parent=FBgn0037816.1.mrna1;Target=FBgn0037816.1 527 1773 +
Chr2	stalkie_big_nohaplotig	CDS	148870195	148870720	.	+	0	Parent=FBgn0037816.1.mrna1;Target=FBgn0037816.1 1 526 +
Chr2	stalkie_big_nohaplotig	CDS	148870788	148872034	.	+	2	Parent=FBgn0037816.1.mrna1;Target=FBgn0037816.1 527 1773 +
Chr2	gffcl	locus	148875972	148877161	.	-	.	ID=RLOC_00022622;geneIDs=FBgn0039726.1.path1;transcripts=FBgn0039726.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148875972	148877161	.	-	.	ID=FBgn0039726.1.mrna1;geneID=FBgn0039726.1.path1;Name=FBgn0039726.1;Dir=sensecoverage=100.0;identity=99.7;matches=930;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022622
Chr2	stalkie_big_nohaplotig	exon	148875972	148876115	98	-	.	Parent=FBgn0039726.1.mrna1;Target=FBgn0039726.1 790 933 +
Chr2	stalkie_big_nohaplotig	exon	148876179	148876449	100	-	.	Parent=FBgn0039726.1.mrna1;Target=FBgn0039726.1 519 789 +
Chr2	stalkie_big_nohaplotig	exon	148876519	148876885	99	-	.	Parent=FBgn0039726.1.mrna1;Target=FBgn0039726.1 152 518 +
Chr2	stalkie_big_nohaplotig	exon	148876939	148877040	100	-	.	Parent=FBgn0039726.1.mrna1;Target=FBgn0039726.1 50 151 +
Chr2	stalkie_big_nohaplotig	exon	148877113	148877161	100	-	.	Parent=FBgn0039726.1.mrna1;Target=FBgn0039726.1 1 49 +
Chr2	stalkie_big_nohaplotig	CDS	148875972	148876115	.	-	0	Parent=FBgn0039726.1.mrna1;Target=FBgn0039726.1 790 933 +
Chr2	stalkie_big_nohaplotig	CDS	148876179	148876449	.	-	1	Parent=FBgn0039726.1.mrna1;Target=FBgn0039726.1 519 789 +
Chr2	stalkie_big_nohaplotig	CDS	148876519	148876885	.	-	2	Parent=FBgn0039726.1.mrna1;Target=FBgn0039726.1 152 518 +
Chr2	stalkie_big_nohaplotig	CDS	148876939	148877040	.	-	2	Parent=FBgn0039726.1.mrna1;Target=FBgn0039726.1 50 151 +
Chr2	stalkie_big_nohaplotig	CDS	148877113	148877161	.	-	0	Parent=FBgn0039726.1.mrna1;Target=FBgn0039726.1 1 49 +
Chr2	gffcl	locus	148984413	148985553	.	-	.	ID=RLOC_00022623;geneIDs=comp155485_c0_seq1.path1;transcripts=comp155485_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148984413	148985553	.	-	.	ID=comp155485_c0_seq1.mrna1;geneID=comp155485_c0_seq1.path1;Name=comp155485_c0_seq1;Dir=antisensecoverage=94.8;identity=99.6;matches=955;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022623
Chr2	stalkie_big_nohaplotig	exon	148984413	148984796	99	-	.	Parent=comp155485_c0_seq1.mrna1;Target=comp155485_c0_seq1 13 396 -
Chr2	stalkie_big_nohaplotig	exon	148984889	148985317	99	-	.	Parent=comp155485_c0_seq1.mrna1;Target=comp155485_c0_seq1 397 825 -
Chr2	stalkie_big_nohaplotig	exon	148985408	148985553	100	-	.	Parent=comp155485_c0_seq1.mrna1;Target=comp155485_c0_seq1 826 971 -
Chr2	stalkie_big_nohaplotig	CDS	148984731	148984796	.	-	0	Parent=comp155485_c0_seq1.mrna1;Target=comp155485_c0_seq1 331 396 .
Chr2	stalkie_big_nohaplotig	CDS	148984889	148985317	.	-	0	Parent=comp155485_c0_seq1.mrna1;Target=comp155485_c0_seq1 397 825 .
Chr2	stalkie_big_nohaplotig	CDS	148985408	148985524	.	-	0	Parent=comp155485_c0_seq1.mrna1;Target=comp155485_c0_seq1 826 942 .
Chr2	gffcl	locus	148991895	148996781	.	+	.	ID=RLOC_00022624;geneIDs=FBgn0038897.2.path1;transcripts=FBgn0038897.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148991895	148996781	.	+	.	ID=FBgn0038897.2.mrna1;geneID=FBgn0038897.2.path1;Name=FBgn0038897.2;Dir=sensecoverage=100.0;identity=98.4;matches=2862;mismatches=36;indels=12;unknowns=0;locus=RLOC_00022624
Chr2	stalkie_big_nohaplotig	exon	148991895	148992550	97	+	.	Parent=FBgn0038897.2.mrna1;Target=FBgn0038897.2 1 656 +
Chr2	stalkie_big_nohaplotig	exon	148992616	148992774	99	+	.	Parent=FBgn0038897.2.mrna1;Target=FBgn0038897.2 657 815 +
Chr2	stalkie_big_nohaplotig	exon	148992844	148993324	100	+	.	Parent=FBgn0038897.2.mrna1;Target=FBgn0038897.2 816 1296 +
Chr2	stalkie_big_nohaplotig	exon	148993581	148993728	97	+	.	Parent=FBgn0038897.2.mrna1;Target=FBgn0038897.2 1297 1444 +
Chr2	stalkie_big_nohaplotig	exon	148995153	148995234	100	+	.	Parent=FBgn0038897.2.mrna1;Target=FBgn0038897.2 1445 1526 +
Chr2	stalkie_big_nohaplotig	exon	148995313	148996513	98	+	.	Parent=FBgn0038897.2.mrna1;Target=FBgn0038897.2 1527 2727 +
Chr2	stalkie_big_nohaplotig	exon	148996605	148996781	98	+	.	Parent=FBgn0038897.2.mrna1;Target=FBgn0038897.2 2728 2904 +
Chr2	stalkie_big_nohaplotig	CDS	148991895	148992550	.	+	0	Parent=FBgn0038897.2.mrna1;Target=FBgn0038897.2 1 656 +
Chr2	stalkie_big_nohaplotig	CDS	148992616	148992774	.	+	1	Parent=FBgn0038897.2.mrna1;Target=FBgn0038897.2 657 815 +
Chr2	stalkie_big_nohaplotig	CDS	148992844	148993324	.	+	1	Parent=FBgn0038897.2.mrna1;Target=FBgn0038897.2 816 1296 +
Chr2	stalkie_big_nohaplotig	CDS	148993581	148993728	.	+	0	Parent=FBgn0038897.2.mrna1;Target=FBgn0038897.2 1297 1444 +
Chr2	stalkie_big_nohaplotig	CDS	148995153	148995234	.	+	2	Parent=FBgn0038897.2.mrna1;Target=FBgn0038897.2 1445 1526 +
Chr2	stalkie_big_nohaplotig	CDS	148995313	148996513	.	+	1	Parent=FBgn0038897.2.mrna1;Target=FBgn0038897.2 1527 2727 +
Chr2	stalkie_big_nohaplotig	CDS	148996605	148996781	.	+	0	Parent=FBgn0038897.2.mrna1;Target=FBgn0038897.2 2728 2904 +
Chr2	gffcl	locus	148998940	149005524	.	+	.	ID=RLOC_00022625;geneIDs=FBgn0038897.1.path1;transcripts=FBgn0038897.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	148998940	149005524	.	+	.	ID=FBgn0038897.1.mrna1;geneID=FBgn0038897.1.path1;Name=FBgn0038897.1;Dir=sensecoverage=100.0;identity=99.8;matches=2960;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022625
Chr2	stalkie_big_nohaplotig	exon	148998940	148999481	100	+	.	Parent=FBgn0038897.1.mrna1;Target=FBgn0038897.1 1 542 +
Chr2	stalkie_big_nohaplotig	exon	149001727	149001885	99	+	.	Parent=FBgn0038897.1.mrna1;Target=FBgn0038897.1 543 701 +
Chr2	stalkie_big_nohaplotig	exon	149001945	149002425	99	+	.	Parent=FBgn0038897.1.mrna1;Target=FBgn0038897.1 702 1182 +
Chr2	stalkie_big_nohaplotig	exon	149003595	149003830	100	+	.	Parent=FBgn0038897.1.mrna1;Target=FBgn0038897.1 1183 1418 +
Chr2	stalkie_big_nohaplotig	exon	149003915	149005172	99	+	.	Parent=FBgn0038897.1.mrna1;Target=FBgn0038897.1 1419 2676 +
Chr2	stalkie_big_nohaplotig	exon	149005234	149005524	100	+	.	Parent=FBgn0038897.1.mrna1;Target=FBgn0038897.1 2677 2967 +
Chr2	stalkie_big_nohaplotig	CDS	148998940	148999481	.	+	0	Parent=FBgn0038897.1.mrna1;Target=FBgn0038897.1 1 542 +
Chr2	stalkie_big_nohaplotig	CDS	149001727	149001885	.	+	1	Parent=FBgn0038897.1.mrna1;Target=FBgn0038897.1 543 701 +
Chr2	stalkie_big_nohaplotig	CDS	149001945	149002425	.	+	1	Parent=FBgn0038897.1.mrna1;Target=FBgn0038897.1 702 1182 +
Chr2	stalkie_big_nohaplotig	CDS	149003595	149003830	.	+	0	Parent=FBgn0038897.1.mrna1;Target=FBgn0038897.1 1183 1418 +
Chr2	stalkie_big_nohaplotig	CDS	149003915	149005172	.	+	1	Parent=FBgn0038897.1.mrna1;Target=FBgn0038897.1 1419 2676 +
Chr2	stalkie_big_nohaplotig	CDS	149005234	149005524	.	+	0	Parent=FBgn0038897.1.mrna1;Target=FBgn0038897.1 2677 2967 +
Chr2	gffcl	locus	149012308	149016943	.	+	.	ID=RLOC_00022626;geneIDs=FBgn0051233.1.path1;transcripts=FBgn0051233.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149012308	149016943	.	+	.	ID=FBgn0051233.1.mrna1;geneID=FBgn0051233.1.path1;Name=FBgn0051233.1;Dir=sensecoverage=100.0;identity=99.3;matches=2882;mismatches=19;indels=0;unknowns=0;locus=RLOC_00022626
Chr2	stalkie_big_nohaplotig	exon	149012308	149012870	99	+	.	Parent=FBgn0051233.1.mrna1;Target=FBgn0051233.1 1 563 +
Chr2	stalkie_big_nohaplotig	exon	149013030	149013185	98	+	.	Parent=FBgn0051233.1.mrna1;Target=FBgn0051233.1 564 719 +
Chr2	stalkie_big_nohaplotig	exon	149014389	149014866	99	+	.	Parent=FBgn0051233.1.mrna1;Target=FBgn0051233.1 720 1197 +
Chr2	stalkie_big_nohaplotig	exon	149015100	149015338	99	+	.	Parent=FBgn0051233.1.mrna1;Target=FBgn0051233.1 1198 1436 +
Chr2	stalkie_big_nohaplotig	exon	149015414	149016656	99	+	.	Parent=FBgn0051233.1.mrna1;Target=FBgn0051233.1 1437 2679 +
Chr2	stalkie_big_nohaplotig	exon	149016722	149016943	99	+	.	Parent=FBgn0051233.1.mrna1;Target=FBgn0051233.1 2680 2901 +
Chr2	stalkie_big_nohaplotig	CDS	149012308	149012870	.	+	0	Parent=FBgn0051233.1.mrna1;Target=FBgn0051233.1 1 563 +
Chr2	stalkie_big_nohaplotig	CDS	149013030	149013185	.	+	1	Parent=FBgn0051233.1.mrna1;Target=FBgn0051233.1 564 719 +
Chr2	stalkie_big_nohaplotig	CDS	149014389	149014866	.	+	1	Parent=FBgn0051233.1.mrna1;Target=FBgn0051233.1 720 1197 +
Chr2	stalkie_big_nohaplotig	CDS	149015100	149015338	.	+	0	Parent=FBgn0051233.1.mrna1;Target=FBgn0051233.1 1198 1436 +
Chr2	stalkie_big_nohaplotig	CDS	149015414	149016656	.	+	1	Parent=FBgn0051233.1.mrna1;Target=FBgn0051233.1 1437 2679 +
Chr2	stalkie_big_nohaplotig	CDS	149016722	149016943	.	+	0	Parent=FBgn0051233.1.mrna1;Target=FBgn0051233.1 2680 2901 +
Chr2	gffcl	locus	149024883	149029868	.	+	.	ID=RLOC_00022627;geneIDs=FBgn0051198.1.path1,comp159488_c0_seq1.path1;transcripts=FBgn0051198.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149024883	149029697	.	+	.	ID=FBgn0051198.1.mrna1;geneID=FBgn0051198.1.path1;Name=FBgn0051198.1;Dir=sensecoverage=100.0;identity=98.6;matches=2799;mismatches=39;indels=0;unknowns=0;locus=RLOC_00022627
Chr2	stalkie_big_nohaplotig	exon	149024883	149024914	93	+	.	Parent=FBgn0051198.1.mrna1;Target=FBgn0051198.1 1 32 +
Chr2	stalkie_big_nohaplotig	exon	149026561	149027058	97	+	.	Parent=FBgn0051198.1.mrna1;Target=FBgn0051198.1 33 530 +
Chr2	stalkie_big_nohaplotig	exon	149027129	149027287	96	+	.	Parent=FBgn0051198.1.mrna1;Target=FBgn0051198.1 531 689 +
Chr2	stalkie_big_nohaplotig	exon	149027357	149027831	98	+	.	Parent=FBgn0051198.1.mrna1;Target=FBgn0051198.1 690 1164 +
Chr2	stalkie_big_nohaplotig	exon	149027891	149028132	100	+	.	Parent=FBgn0051198.1.mrna1;Target=FBgn0051198.1 1165 1406 +
Chr2	stalkie_big_nohaplotig	exon	149028204	149029334	98	+	.	Parent=FBgn0051198.1.mrna1;Target=FBgn0051198.1 1407 2537 +
Chr2	stalkie_big_nohaplotig	exon	149029397	149029697	100	+	.	Parent=FBgn0051198.1.mrna1;Target=FBgn0051198.1 2538 2838 +
Chr2	stalkie_big_nohaplotig	CDS	149024883	149024914	.	+	0	Parent=FBgn0051198.1.mrna1;Target=FBgn0051198.1 1 32 +
Chr2	stalkie_big_nohaplotig	CDS	149026561	149027058	.	+	1	Parent=FBgn0051198.1.mrna1;Target=FBgn0051198.1 33 530 +
Chr2	stalkie_big_nohaplotig	CDS	149027129	149027287	.	+	1	Parent=FBgn0051198.1.mrna1;Target=FBgn0051198.1 531 689 +
Chr2	stalkie_big_nohaplotig	CDS	149027357	149027831	.	+	1	Parent=FBgn0051198.1.mrna1;Target=FBgn0051198.1 690 1164 +
Chr2	stalkie_big_nohaplotig	CDS	149027891	149028132	.	+	0	Parent=FBgn0051198.1.mrna1;Target=FBgn0051198.1 1165 1406 +
Chr2	stalkie_big_nohaplotig	CDS	149028204	149029334	.	+	1	Parent=FBgn0051198.1.mrna1;Target=FBgn0051198.1 1407 2537 +
Chr2	stalkie_big_nohaplotig	CDS	149029397	149029697	.	+	1	Parent=FBgn0051198.1.mrna1;Target=FBgn0051198.1 2538 2838 +
Chr2	gffcl	locus	149038440	149042710	.	+	.	ID=RLOC_00022628;geneIDs=FBgn0259237.1.path1;transcripts=FBgn0259237.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149038440	149042710	.	+	.	ID=FBgn0259237.1.mrna1;geneID=FBgn0259237.1.path1;Name=FBgn0259237.1;Dir=sensecoverage=100.0;identity=99.5;matches=2081;mismatches=9;indels=1;unknowns=0;locus=RLOC_00022628
Chr2	stalkie_big_nohaplotig	exon	149038440	149038945	99	+	.	Parent=FBgn0259237.1.mrna1;Target=FBgn0259237.1 1 506 +
Chr2	stalkie_big_nohaplotig	exon	149039164	149039322	100	+	.	Parent=FBgn0259237.1.mrna1;Target=FBgn0259237.1 507 665 +
Chr2	stalkie_big_nohaplotig	exon	149039386	149039679	98	+	.	Parent=FBgn0259237.1.mrna1;Target=FBgn0259237.1 666 959 +
Chr2	stalkie_big_nohaplotig	exon	149039767	149039953	99	+	.	Parent=FBgn0259237.1.mrna1;Target=FBgn0259237.1 960 1146 +
Chr2	stalkie_big_nohaplotig	exon	149040032	149040279	99	+	.	Parent=FBgn0259237.1.mrna1;Target=FBgn0259237.1 1147 1394 +
Chr2	stalkie_big_nohaplotig	exon	149042015	149042710	99	+	.	Parent=FBgn0259237.1.mrna1;Target=FBgn0259237.1 1395 2091 +
Chr2	stalkie_big_nohaplotig	CDS	149038440	149038945	.	+	0	Parent=FBgn0259237.1.mrna1;Target=FBgn0259237.1 1 506 +
Chr2	stalkie_big_nohaplotig	CDS	149039164	149039322	.	+	1	Parent=FBgn0259237.1.mrna1;Target=FBgn0259237.1 507 665 +
Chr2	stalkie_big_nohaplotig	CDS	149039386	149039679	.	+	1	Parent=FBgn0259237.1.mrna1;Target=FBgn0259237.1 666 959 +
Chr2	stalkie_big_nohaplotig	CDS	149039767	149039953	.	+	1	Parent=FBgn0259237.1.mrna1;Target=FBgn0259237.1 960 1146 +
Chr2	stalkie_big_nohaplotig	CDS	149040032	149040279	.	+	0	Parent=FBgn0259237.1.mrna1;Target=FBgn0259237.1 1147 1394 +
Chr2	stalkie_big_nohaplotig	CDS	149042015	149042710	.	+	1	Parent=FBgn0259237.1.mrna1;Target=FBgn0259237.1 1395 2091 +
Chr2	stalkie_big_nohaplotig	mRNA	149101023	149101432	.	-	.	ID=comp117143_c0_seq1.mrna1;geneID=comp117143_c0_seq1.path1;Name=comp117143_c0_seq1;Dir=indeterminatecoverage=99.5;identity=97.6;matches=406;mismatches=4;indels=6;unknowns=0;Target=comp117143_c0_seq1 416 1 .;CDS_Target=comp117143_c0_seq1 99 1 .;locus=RLOC_00022629
Chr2	stalkie_big_nohaplotig	exon	149101023	149101432	97	-	.	Parent=comp117143_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	149101334	149101432	.	-	0	Parent=comp117143_c0_seq1.mrna1
Chr2	gffcl	locus	149086554	149086852	.	-	.	ID=RLOC_00022630;geneIDs=comp471534_c0_seq1.path1;transcripts=comp471534_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149086554	149086852	.	-	.	ID=comp471534_c0_seq1.mrna1;geneID=comp471534_c0_seq1.path1;Name=comp471534_c0_seq1;Dir=indeterminatecoverage=90.1;identity=99.7;matches=298;mismatches=1;indels=0;unknowns=0;Target=comp471534_c0_seq1 300 2 .;CDS_Target=comp471534_c0_seq1 225 64 .;locus=RLOC_00022630
Chr2	stalkie_big_nohaplotig	exon	149086554	149086852	99	-	.	Parent=comp471534_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	149086629	149086790	.	-	0	Parent=comp471534_c0_seq1.mrna1
Chr2	gffcl	locus	149090540	149099651	.	-	.	ID=RLOC_00022631;geneIDs=FBgn0243512.1.path1;transcripts=FBgn0243512.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149090540	149099651	.	-	.	ID=FBgn0243512.1.mrna1;geneID=FBgn0243512.1.path1;Name=FBgn0243512.1;Dir=sensecoverage=45.9;identity=99.8;matches=627;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022631
Chr2	stalkie_big_nohaplotig	exon	149090540	149090764	99	-	.	Parent=FBgn0243512.1.mrna1;Target=FBgn0243512.1 404 628 +
Chr2	stalkie_big_nohaplotig	exon	149095986	149096138	100	-	.	Parent=FBgn0243512.1.mrna1;Target=FBgn0243512.1 251 403 +
Chr2	stalkie_big_nohaplotig	exon	149099402	149099651	100	-	.	Parent=FBgn0243512.1.mrna1;Target=FBgn0243512.1 1 250 +
Chr2	stalkie_big_nohaplotig	CDS	149090541	149090764	.	-	2	Parent=FBgn0243512.1.mrna1;Target=FBgn0243512.1 404 627 +
Chr2	stalkie_big_nohaplotig	CDS	149095986	149096138	.	-	2	Parent=FBgn0243512.1.mrna1;Target=FBgn0243512.1 251 403 +
Chr2	stalkie_big_nohaplotig	CDS	149099402	149099651	.	-	0	Parent=FBgn0243512.1.mrna1;Target=FBgn0243512.1 1 250 +
Chr2	gffcl	locus	149107666	149111705	.	-	.	ID=RLOC_00022632;geneIDs=FBgn0037547.1.path1;transcripts=FBgn0037547.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149107666	149111705	.	-	.	ID=FBgn0037547.1.mrna1;geneID=FBgn0037547.1.path1;Name=FBgn0037547.1;Dir=sensecoverage=100.0;identity=98.8;matches=1585;mismatches=20;indels=0;unknowns=0;locus=RLOC_00022632
Chr2	stalkie_big_nohaplotig	exon	149107666	149107947	99	-	.	Parent=FBgn0037547.1.mrna1;Target=FBgn0037547.1 1324 1605 +
Chr2	stalkie_big_nohaplotig	exon	149108008	149108280	98	-	.	Parent=FBgn0037547.1.mrna1;Target=FBgn0037547.1 1051 1323 +
Chr2	stalkie_big_nohaplotig	exon	149108427	149108552	99	-	.	Parent=FBgn0037547.1.mrna1;Target=FBgn0037547.1 925 1050 +
Chr2	stalkie_big_nohaplotig	exon	149108622	149108915	99	-	.	Parent=FBgn0037547.1.mrna1;Target=FBgn0037547.1 631 924 +
Chr2	stalkie_big_nohaplotig	exon	149108986	149109203	99	-	.	Parent=FBgn0037547.1.mrna1;Target=FBgn0037547.1 413 630 +
Chr2	stalkie_big_nohaplotig	exon	149111233	149111455	97	-	.	Parent=FBgn0037547.1.mrna1;Target=FBgn0037547.1 190 412 +
Chr2	stalkie_big_nohaplotig	exon	149111517	149111705	97	-	.	Parent=FBgn0037547.1.mrna1;Target=FBgn0037547.1 1 189 +
Chr2	stalkie_big_nohaplotig	CDS	149107666	149107947	.	-	0	Parent=FBgn0037547.1.mrna1;Target=FBgn0037547.1 1324 1605 +
Chr2	stalkie_big_nohaplotig	CDS	149108008	149108280	.	-	0	Parent=FBgn0037547.1.mrna1;Target=FBgn0037547.1 1051 1323 +
Chr2	stalkie_big_nohaplotig	CDS	149108427	149108552	.	-	0	Parent=FBgn0037547.1.mrna1;Target=FBgn0037547.1 925 1050 +
Chr2	stalkie_big_nohaplotig	CDS	149108622	149108915	.	-	0	Parent=FBgn0037547.1.mrna1;Target=FBgn0037547.1 631 924 +
Chr2	stalkie_big_nohaplotig	CDS	149108986	149109203	.	-	2	Parent=FBgn0037547.1.mrna1;Target=FBgn0037547.1 413 630 +
Chr2	stalkie_big_nohaplotig	CDS	149111233	149111455	.	-	0	Parent=FBgn0037547.1.mrna1;Target=FBgn0037547.1 190 412 +
Chr2	stalkie_big_nohaplotig	CDS	149111517	149111705	.	-	0	Parent=FBgn0037547.1.mrna1;Target=FBgn0037547.1 1 189 +
Chr2	gffcl	locus	149116690	149117075	.	-	.	ID=RLOC_00022633;geneIDs=comp136230_c0_seq1.path1;transcripts=comp136230_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149116690	149117075	.	-	.	ID=comp136230_c0_seq1.mrna1;geneID=comp136230_c0_seq1.path1;Name=comp136230_c0_seq1;Dir=indeterminatecoverage=96.8;identity=98.2;matches=380;mismatches=6;indels=1;unknowns=0;Target=comp136230_c0_seq1 387 1 .;CDS_Target=comp136230_c0_seq1 387 292 .;locus=RLOC_00022633
Chr2	stalkie_big_nohaplotig	exon	149116690	149117075	98	-	.	Parent=comp136230_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	149116690	149116785	.	-	0	Parent=comp136230_c0_seq1.mrna1
Chr2	gffcl	locus	149173688	149175464	.	+	.	ID=RLOC_00022635;geneIDs=FBgn0259676.1.path1;transcripts=FBgn0259676.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149173688	149175464	.	+	.	ID=FBgn0259676.1.mrna1;geneID=FBgn0259676.1.path1;Name=FBgn0259676.1;Dir=sensecoverage=100.0;identity=99.2;matches=1703;mismatches=13;indels=0;unknowns=0;locus=RLOC_00022635
Chr2	stalkie_big_nohaplotig	exon	149173688	149174199	99	+	.	Parent=FBgn0259676.1.mrna1;Target=FBgn0259676.1 1 512 +
Chr2	stalkie_big_nohaplotig	exon	149174261	149175464	99	+	.	Parent=FBgn0259676.1.mrna1;Target=FBgn0259676.1 513 1716 +
Chr2	stalkie_big_nohaplotig	CDS	149173688	149174199	.	+	0	Parent=FBgn0259676.1.mrna1;Target=FBgn0259676.1 1 512 +
Chr2	stalkie_big_nohaplotig	CDS	149174261	149175464	.	+	1	Parent=FBgn0259676.1.mrna1;Target=FBgn0259676.1 513 1716 +
Chr2	gffcl	locus	149184134	149184350	.	+	.	ID=RLOC_00022636;geneIDs=FBgn0028420.1.path1;transcripts=FBgn0028420.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149184134	149184350	.	+	.	ID=FBgn0028420.1.mrna1;geneID=FBgn0028420.1.path1;Name=FBgn0028420.1;Dir=indeterminatecoverage=8.7;identity=99.5;matches=216;mismatches=1;indels=0;unknowns=0;Target=FBgn0028420.1 217 1 .;locus=RLOC_00022636
Chr2	stalkie_big_nohaplotig	exon	149184134	149184350	99	+	.	Parent=FBgn0028420.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	149184134	149184350	.	+	0	Parent=FBgn0028420.1.mrna1
Chr2	gffcl	locus	149185992	149190680	.	+	.	ID=RLOC_00022637;geneIDs=comp151779_c0_seq1.path1;transcripts=comp151779_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149185992	149190680	.	+	.	ID=comp151779_c0_seq1.mrna1;geneID=comp151779_c0_seq1.path1;Name=comp151779_c0_seq1;Dir=sensecoverage=68.3;identity=97.1;matches=398;mismatches=10;indels=2;unknowns=0;locus=RLOC_00022637
Chr2	stalkie_big_nohaplotig	exon	149185992	149186015	100	+	.	Parent=comp151779_c0_seq1.mrna1;Target=comp151779_c0_seq1 1 24 +
Chr2	stalkie_big_nohaplotig	exon	149188862	149189081	96	+	.	Parent=comp151779_c0_seq1.mrna1;Target=comp151779_c0_seq1 25 244 +
Chr2	stalkie_big_nohaplotig	exon	149190515	149190680	96	+	.	Parent=comp151779_c0_seq1.mrna1;Target=comp151779_c0_seq1 245 408 +
Chr2	stalkie_big_nohaplotig	CDS	149185992	149186015	.	+	0	Parent=comp151779_c0_seq1.mrna1;Target=comp151779_c0_seq1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	149188862	149188945	.	+	0	Parent=comp151779_c0_seq1.mrna1;Target=comp151779_c0_seq1 25 108 +
Chr2	gffcl	locus	149267040	149267588	.	-	.	ID=RLOC_00022639;geneIDs=FBgn0004644.1.path1;transcripts=FBgn0004644.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149267040	149267588	.	-	.	ID=FBgn0004644.1.mrna1;geneID=FBgn0004644.1.path1;Name=FBgn0004644.1;Dir=indeterminatecoverage=36.6;identity=99.6;matches=547;mismatches=2;indels=0;unknowns=0;Target=FBgn0004644.1 549 1 .;locus=RLOC_00022639
Chr2	stalkie_big_nohaplotig	exon	149267040	149267588	99	-	.	Parent=FBgn0004644.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	149267040	149267588	.	-	0	Parent=FBgn0004644.1.mrna1
Chr2	gffcl	locus	149267804	149268111	.	-	.	ID=RLOC_00022640;geneIDs=comp1002226_c0_seq1.path1;transcripts=comp1002226_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149267804	149268111	.	-	.	ID=comp1002226_c0_seq1.mrna1;geneID=comp1002226_c0_seq1.path1;Name=comp1002226_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=304;mismatches=4;indels=0;unknowns=0;Target=comp1002226_c0_seq1 308 1 .;CDS_Target=comp1002226_c0_seq1 81 1 .;locus=RLOC_00022640
Chr2	stalkie_big_nohaplotig	exon	149267804	149268111	98	-	.	Parent=comp1002226_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	149268031	149268111	.	-	0	Parent=comp1002226_c0_seq1.mrna1
Chr2	gffcl	locus	149290668	149291473	.	+	.	ID=RLOC_00022641;geneIDs=comp1548514_c0_seq1.path1;transcripts=comp1548514_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149290668	149291473	.	+	.	ID=comp1548514_c0_seq1.mrna1;geneID=comp1548514_c0_seq1.path1;Name=comp1548514_c0_seq1;Dir=indeterminatecoverage=95.3;identity=98.0;matches=801;mismatches=4;indels=12;unknowns=0;Target=comp1548514_c0_seq1 856 41 .;CDS_Target=comp1548514_c0_seq1 330 172 .;locus=RLOC_00022641
Chr2	stalkie_big_nohaplotig	exon	149290668	149291473	98	+	.	Parent=comp1548514_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	149290800	149290950	.	+	0	Parent=comp1548514_c0_seq1.mrna1
Chr2	gffcl	locus	149293332	149293662	.	-	.	ID=RLOC_00022642;geneIDs=comp146014_c1_seq1.path1;transcripts=comp146014_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149293332	149293662	.	-	.	ID=comp146014_c1_seq1.mrna1;geneID=comp146014_c1_seq1.path1;Name=comp146014_c1_seq1;Dir=indeterminatecoverage=82.3;identity=96.4;matches=319;mismatches=1;indels=11;unknowns=0;Target=comp146014_c1_seq1 387 68 .;CDS_Target=comp146014_c1_seq1 248 207 .;locus=RLOC_00022642
Chr2	stalkie_big_nohaplotig	exon	149293332	149293662	96	-	.	Parent=comp146014_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	149293471	149293512	.	-	0	Parent=comp146014_c1_seq1.mrna1
Chr2	gffcl	locus	149313111	149317205	.	+	.	ID=RLOC_00022644;geneIDs=FBgn0039508.1.path1;transcripts=FBgn0039508.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149313111	149317205	.	+	.	ID=FBgn0039508.1.mrna1;geneID=FBgn0039508.1.path1;Name=FBgn0039508.1;Dir=sensecoverage=100.0;identity=99.0;matches=3427;mismatches=35;indels=0;unknowns=0;locus=RLOC_00022644
Chr2	stalkie_big_nohaplotig	exon	149313111	149313197	100	+	.	Parent=FBgn0039508.1.mrna1;Target=FBgn0039508.1 1 87 +
Chr2	stalkie_big_nohaplotig	exon	149313262	149315337	99	+	.	Parent=FBgn0039508.1.mrna1;Target=FBgn0039508.1 88 2163 +
Chr2	stalkie_big_nohaplotig	exon	149315849	149316011	99	+	.	Parent=FBgn0039508.1.mrna1;Target=FBgn0039508.1 2164 2326 +
Chr2	stalkie_big_nohaplotig	exon	149316070	149317205	98	+	.	Parent=FBgn0039508.1.mrna1;Target=FBgn0039508.1 2327 3462 +
Chr2	stalkie_big_nohaplotig	CDS	149313111	149313197	.	+	0	Parent=FBgn0039508.1.mrna1;Target=FBgn0039508.1 1 87 +
Chr2	stalkie_big_nohaplotig	CDS	149313262	149315337	.	+	0	Parent=FBgn0039508.1.mrna1;Target=FBgn0039508.1 88 2163 +
Chr2	stalkie_big_nohaplotig	CDS	149315849	149316011	.	+	0	Parent=FBgn0039508.1.mrna1;Target=FBgn0039508.1 2164 2326 +
Chr2	stalkie_big_nohaplotig	CDS	149316070	149317205	.	+	2	Parent=FBgn0039508.1.mrna1;Target=FBgn0039508.1 2327 3462 +
Chr2	gffcl	locus	149321405	149322949	.	-	.	ID=RLOC_00022646;geneIDs=FBgn0015737.1.path1;transcripts=FBgn0015737.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149321405	149322949	.	-	.	ID=FBgn0015737.1.mrna1;geneID=FBgn0015737.1.path1;Name=FBgn0015737.1;Dir=sensecoverage=100.0;identity=99.3;matches=1266;mismatches=9;indels=0;unknowns=0;locus=RLOC_00022646
Chr2	stalkie_big_nohaplotig	exon	149321405	149322014	99	-	.	Parent=FBgn0015737.1.mrna1;Target=FBgn0015737.1 666 1275 +
Chr2	stalkie_big_nohaplotig	exon	149322077	149322380	100	-	.	Parent=FBgn0015737.1.mrna1;Target=FBgn0015737.1 362 665 +
Chr2	stalkie_big_nohaplotig	exon	149322536	149322741	99	-	.	Parent=FBgn0015737.1.mrna1;Target=FBgn0015737.1 156 361 +
Chr2	stalkie_big_nohaplotig	exon	149322795	149322949	98	-	.	Parent=FBgn0015737.1.mrna1;Target=FBgn0015737.1 1 155 +
Chr2	stalkie_big_nohaplotig	CDS	149321405	149322014	.	-	1	Parent=FBgn0015737.1.mrna1;Target=FBgn0015737.1 666 1275 +
Chr2	stalkie_big_nohaplotig	CDS	149322077	149322380	.	-	2	Parent=FBgn0015737.1.mrna1;Target=FBgn0015737.1 362 665 +
Chr2	stalkie_big_nohaplotig	CDS	149322536	149322741	.	-	1	Parent=FBgn0015737.1.mrna1;Target=FBgn0015737.1 156 361 +
Chr2	stalkie_big_nohaplotig	CDS	149322795	149322949	.	-	0	Parent=FBgn0015737.1.mrna1;Target=FBgn0015737.1 1 155 +
Chr2	gffcl	locus	149325299	149326721	.	+	.	ID=RLOC_00022647;geneIDs=FBgn0015737.2.path1;transcripts=FBgn0015737.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149325299	149326721	.	+	.	ID=FBgn0015737.2.mrna1;geneID=FBgn0015737.2.path1;Name=FBgn0015737.2;Dir=sensecoverage=100.0;identity=98.6;matches=1216;mismatches=17;indels=0;unknowns=0;locus=RLOC_00022647
Chr2	stalkie_big_nohaplotig	exon	149325299	149325402	99	+	.	Parent=FBgn0015737.2.mrna1;Target=FBgn0015737.2 1 104 +
Chr2	stalkie_big_nohaplotig	exon	149325464	149325669	99	+	.	Parent=FBgn0015737.2.mrna1;Target=FBgn0015737.2 105 310 +
Chr2	stalkie_big_nohaplotig	exon	149325737	149326037	99	+	.	Parent=FBgn0015737.2.mrna1;Target=FBgn0015737.2 311 611 +
Chr2	stalkie_big_nohaplotig	exon	149326100	149326721	97	+	.	Parent=FBgn0015737.2.mrna1;Target=FBgn0015737.2 612 1233 +
Chr2	stalkie_big_nohaplotig	CDS	149325299	149325402	.	+	0	Parent=FBgn0015737.2.mrna1;Target=FBgn0015737.2 1 104 +
Chr2	stalkie_big_nohaplotig	CDS	149325464	149325669	.	+	1	Parent=FBgn0015737.2.mrna1;Target=FBgn0015737.2 105 310 +
Chr2	stalkie_big_nohaplotig	CDS	149325737	149326037	.	+	2	Parent=FBgn0015737.2.mrna1;Target=FBgn0015737.2 311 611 +
Chr2	stalkie_big_nohaplotig	CDS	149326100	149326721	.	+	1	Parent=FBgn0015737.2.mrna1;Target=FBgn0015737.2 612 1233 +
Chr2	gffcl	locus	149334959	149335211	.	-	.	ID=RLOC_00022649;geneIDs=FBgn0040609.1.path1;transcripts=FBgn0040609.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149334959	149335211	.	-	.	ID=FBgn0040609.1.mrna1;geneID=FBgn0040609.1.path1;Name=FBgn0040609.1;Dir=indeterminatecoverage=93.7;identity=100.0;matches=253;mismatches=0;indels=0;unknowns=0;Target=FBgn0040609.1 270 18 .;CDS_Target=FBgn0040609.1 270 19 .;locus=RLOC_00022649
Chr2	stalkie_big_nohaplotig	exon	149334959	149335211	100	-	.	Parent=FBgn0040609.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	149334959	149335210	.	-	0	Parent=FBgn0040609.1.mrna1
Chr2	gffcl	locus	149390341	149390856	.	+	.	ID=RLOC_00022650;geneIDs=comp80906_c1_seq1.path1;transcripts=comp80906_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149390341	149390856	.	+	.	ID=comp80906_c1_seq1.mrna1;geneID=comp80906_c1_seq1.path1;Name=comp80906_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=513;mismatches=3;indels=0;unknowns=0;Target=comp80906_c1_seq1 516 1 .;CDS_Target=comp80906_c1_seq1 223 101 .;locus=RLOC_00022650
Chr2	stalkie_big_nohaplotig	exon	149390341	149390856	99	+	.	Parent=comp80906_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	149390441	149390563	.	+	0	Parent=comp80906_c1_seq1.mrna1
Chr2	gffcl	locus	149406241	149409524	.	-	.	ID=RLOC_00022651;geneIDs=FBgn0001315.path1;transcripts=FBgn0001315.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149406241	149409524	.	-	.	ID=FBgn0001315.mrna1;geneID=FBgn0001315.path1;Name=FBgn0001315;Dir=sensecoverage=100.0;identity=99.8;matches=2991;mismatches=5;indels=1;unknowns=0;locus=RLOC_00022651
Chr2	stalkie_big_nohaplotig	exon	149406241	149407844	99	-	.	Parent=FBgn0001315.mrna1;Target=FBgn0001315 1393 2997 +
Chr2	stalkie_big_nohaplotig	exon	149407902	149408066	99	-	.	Parent=FBgn0001315.mrna1;Target=FBgn0001315 1228 1392 +
Chr2	stalkie_big_nohaplotig	exon	149408126	149408512	100	-	.	Parent=FBgn0001315.mrna1;Target=FBgn0001315 841 1227 +
Chr2	stalkie_big_nohaplotig	exon	149408568	149408845	100	-	.	Parent=FBgn0001315.mrna1;Target=FBgn0001315 563 840 +
Chr2	stalkie_big_nohaplotig	exon	149408905	149409277	99	-	.	Parent=FBgn0001315.mrna1;Target=FBgn0001315 190 562 +
Chr2	stalkie_big_nohaplotig	exon	149409336	149409524	99	-	.	Parent=FBgn0001315.mrna1;Target=FBgn0001315 1 189 +
Chr2	stalkie_big_nohaplotig	CDS	149406241	149407844	.	-	0	Parent=FBgn0001315.mrna1;Target=FBgn0001315 1393 2997 +
Chr2	stalkie_big_nohaplotig	CDS	149407902	149408066	.	-	0	Parent=FBgn0001315.mrna1;Target=FBgn0001315 1228 1392 +
Chr2	stalkie_big_nohaplotig	CDS	149408126	149408512	.	-	0	Parent=FBgn0001315.mrna1;Target=FBgn0001315 841 1227 +
Chr2	stalkie_big_nohaplotig	CDS	149408568	149408845	.	-	2	Parent=FBgn0001315.mrna1;Target=FBgn0001315 563 840 +
Chr2	stalkie_big_nohaplotig	CDS	149408905	149409277	.	-	0	Parent=FBgn0001315.mrna1;Target=FBgn0001315 190 562 +
Chr2	stalkie_big_nohaplotig	CDS	149409336	149409524	.	-	0	Parent=FBgn0001315.mrna1;Target=FBgn0001315 1 189 +
Chr2	gffcl	locus	149417669	149419098	.	-	.	ID=RLOC_00022652;geneIDs=comp160160_c0_seq1.path1;transcripts=comp160160_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149417669	149419098	.	-	.	ID=comp160160_c0_seq1.mrna1;geneID=comp160160_c0_seq1.path1;Name=comp160160_c0_seq1;Dir=sensecoverage=99.2;identity=98.5;matches=1296;mismatches=19;indels=1;unknowns=0;Target=comp160160_c0_seq1 103 759 +;locus=RLOC_00022652
Chr2	stalkie_big_nohaplotig	exon	149417669	149418100	98	-	.	Parent=comp160160_c0_seq1.mrna1;Target=comp160160_c0_seq1 895 1326 +
Chr2	stalkie_big_nohaplotig	exon	149418216	149419098	98	-	.	Parent=comp160160_c0_seq1.mrna1;Target=comp160160_c0_seq1 11 894 +
Chr2	stalkie_big_nohaplotig	CDS	149418350	149419006	.	-	0	Parent=comp160160_c0_seq1.mrna1
Chr2	gffcl	locus	149423551	149424768	.	-	.	ID=RLOC_00022653;geneIDs=Dv_FBgn0209645.2.path4,comp163741_c0_seq1.path1;transcripts=comp163741_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149423551	149424768	.	-	.	ID=comp163741_c0_seq1.mrna1;geneID=comp163741_c0_seq1.path1;Name=comp163741_c0_seq1;Dir=sensecoverage=100.0;identity=97.9;matches=1141;mismatches=22;indels=2;unknowns=0;Target=comp163741_c0_seq1 268 402 +;locus=RLOC_00022653
Chr2	stalkie_big_nohaplotig	exon	149423551	149424683	97	-	.	Parent=comp163741_c0_seq1.mrna1;Target=comp163741_c0_seq1 31 1165 +
Chr2	stalkie_big_nohaplotig	exon	149424739	149424768	100	-	.	Parent=comp163741_c0_seq1.mrna1;Target=comp163741_c0_seq1 1 30 +
Chr2	stalkie_big_nohaplotig	CDS	149424313	149424446	.	-	0	Parent=comp163741_c0_seq1.mrna1
Chr2	gffcl	locus	149480104	149480427	.	-	.	ID=RLOC_00022654;geneIDs=comp117682_c0_seq1.path1;transcripts=comp117682_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149480104	149480427	.	-	.	ID=comp117682_c0_seq1.mrna1;geneID=comp117682_c0_seq1.path1;Name=comp117682_c0_seq1;Dir=indeterminatecoverage=98.2;identity=97.2;matches=315;mismatches=9;indels=0;unknowns=0;Target=comp117682_c0_seq1 329 6 .;CDS_Target=comp117682_c0_seq1 44 6 .;locus=RLOC_00022654
Chr2	stalkie_big_nohaplotig	exon	149480104	149480427	97	-	.	Parent=comp117682_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	149480389	149480427	.	-	0	Parent=comp117682_c0_seq1.mrna1
Chr2	gffcl	locus	149480673	149540482	.	-	.	ID=RLOC_00022655;geneIDs=FBgn0016061.1.path1,comp160221_c4_seq1.path1;transcripts=FBgn0016061.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149480673	149540482	.	-	.	ID=FBgn0016061.1.mrna1;geneID=FBgn0016061.1.path1;Name=FBgn0016061.1;Dir=sensecoverage=96.6;identity=99.1;matches=1770;mismatches=16;indels=0;unknowns=0;locus=RLOC_00022655
Chr2	stalkie_big_nohaplotig	exon	149480673	149480878	99	-	.	Parent=FBgn0016061.1.mrna1;Target=FBgn0016061.1 1581 1786 +
Chr2	stalkie_big_nohaplotig	exon	149492198	149492447	98	-	.	Parent=FBgn0016061.1.mrna1;Target=FBgn0016061.1 1331 1580 +
Chr2	stalkie_big_nohaplotig	exon	149503625	149503799	99	-	.	Parent=FBgn0016061.1.mrna1;Target=FBgn0016061.1 1156 1330 +
Chr2	stalkie_big_nohaplotig	exon	149505204	149505406	97	-	.	Parent=FBgn0016061.1.mrna1;Target=FBgn0016061.1 953 1155 +
Chr2	stalkie_big_nohaplotig	exon	149508365	149508515	99	-	.	Parent=FBgn0016061.1.mrna1;Target=FBgn0016061.1 802 952 +
Chr2	stalkie_big_nohaplotig	exon	149511052	149511200	100	-	.	Parent=FBgn0016061.1.mrna1;Target=FBgn0016061.1 653 801 +
Chr2	stalkie_big_nohaplotig	exon	149519728	149519866	100	-	.	Parent=FBgn0016061.1.mrna1;Target=FBgn0016061.1 514 652 +
Chr2	stalkie_big_nohaplotig	exon	149536126	149536262	100	-	.	Parent=FBgn0016061.1.mrna1;Target=FBgn0016061.1 377 513 +
Chr2	stalkie_big_nohaplotig	exon	149539271	149539406	100	-	.	Parent=FBgn0016061.1.mrna1;Target=FBgn0016061.1 241 376 +
Chr2	stalkie_big_nohaplotig	exon	149540169	149540338	99	-	.	Parent=FBgn0016061.1.mrna1;Target=FBgn0016061.1 71 240 +
Chr2	stalkie_big_nohaplotig	exon	149540413	149540482	97	-	.	Parent=FBgn0016061.1.mrna1;Target=FBgn0016061.1 1 70 +
Chr2	stalkie_big_nohaplotig	CDS	149480673	149480878	.	-	1	Parent=FBgn0016061.1.mrna1;Target=FBgn0016061.1 1581 1786 +
Chr2	stalkie_big_nohaplotig	CDS	149492198	149492447	.	-	2	Parent=FBgn0016061.1.mrna1;Target=FBgn0016061.1 1331 1580 +
Chr2	stalkie_big_nohaplotig	CDS	149503625	149503799	.	-	0	Parent=FBgn0016061.1.mrna1;Target=FBgn0016061.1 1156 1330 +
Chr2	stalkie_big_nohaplotig	CDS	149505204	149505406	.	-	2	Parent=FBgn0016061.1.mrna1;Target=FBgn0016061.1 953 1155 +
Chr2	stalkie_big_nohaplotig	CDS	149508365	149508515	.	-	0	Parent=FBgn0016061.1.mrna1;Target=FBgn0016061.1 802 952 +
Chr2	stalkie_big_nohaplotig	CDS	149511052	149511200	.	-	2	Parent=FBgn0016061.1.mrna1;Target=FBgn0016061.1 653 801 +
Chr2	stalkie_big_nohaplotig	CDS	149519728	149519866	.	-	0	Parent=FBgn0016061.1.mrna1;Target=FBgn0016061.1 514 652 +
Chr2	stalkie_big_nohaplotig	CDS	149536126	149536262	.	-	2	Parent=FBgn0016061.1.mrna1;Target=FBgn0016061.1 377 513 +
Chr2	stalkie_big_nohaplotig	CDS	149539271	149539406	.	-	0	Parent=FBgn0016061.1.mrna1;Target=FBgn0016061.1 241 376 +
Chr2	stalkie_big_nohaplotig	CDS	149540169	149540338	.	-	2	Parent=FBgn0016061.1.mrna1;Target=FBgn0016061.1 71 240 +
Chr2	stalkie_big_nohaplotig	CDS	149540413	149540482	.	-	0	Parent=FBgn0016061.1.mrna1;Target=FBgn0016061.1 1 70 +
Chr2	gffcl	locus	149587288	149588325	.	+	.	ID=RLOC_00022656;geneIDs=comp1200946_c0_seq1.path1;transcripts=comp1200946_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149587288	149588325	.	+	.	ID=comp1200946_c0_seq1.mrna1;geneID=comp1200946_c0_seq1.path1;Name=comp1200946_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1030;mismatches=8;indels=0;unknowns=0;Target=comp1200946_c0_seq1 1038 1 .;CDS_Target=comp1200946_c0_seq1 383 201 .;locus=RLOC_00022656
Chr2	stalkie_big_nohaplotig	exon	149587288	149588325	99	+	.	Parent=comp1200946_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	149587488	149587670	.	+	0	Parent=comp1200946_c0_seq1.mrna1
Chr2	gffcl	locus	149675150	149678352	.	+	.	ID=RLOC_00022657;geneIDs=Dv_FBgn0209735.1.path1;transcripts=Dv_FBgn0209735.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149675150	149678352	.	+	.	ID=Dv_FBgn0209735.1.mrna1;geneID=Dv_FBgn0209735.1.path1;Name=Dv_FBgn0209735.1;Dir=sensecoverage=99.5;identity=99.1;matches=2953;mismatches=21;indels=6;unknowns=0;locus=RLOC_00022657
Chr2	stalkie_big_nohaplotig	exon	149675150	149675212	100	+	.	Parent=Dv_FBgn0209735.1.mrna1;Target=Dv_FBgn0209735.1 15 77 +
Chr2	stalkie_big_nohaplotig	exon	149675362	149675524	99	+	.	Parent=Dv_FBgn0209735.1.mrna1;Target=Dv_FBgn0209735.1 78 240 +
Chr2	stalkie_big_nohaplotig	exon	149675599	149678352	99	+	.	Parent=Dv_FBgn0209735.1.mrna1;Target=Dv_FBgn0209735.1 241 2988 +
Chr2	stalkie_big_nohaplotig	CDS	149675151	149675212	.	+	0	Parent=Dv_FBgn0209735.1.mrna1;Target=Dv_FBgn0209735.1 16 77 +
Chr2	stalkie_big_nohaplotig	CDS	149675362	149675524	.	+	1	Parent=Dv_FBgn0209735.1.mrna1;Target=Dv_FBgn0209735.1 78 240 +
Chr2	stalkie_big_nohaplotig	CDS	149675599	149678352	.	+	0	Parent=Dv_FBgn0209735.1.mrna1;Target=Dv_FBgn0209735.1 241 2988 +
Chr2	gffcl	locus	149743682	149745788	.	+	.	ID=RLOC_00022658;geneIDs=comp156069_c0_seq1.path1;transcripts=comp156069_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149743682	149745788	.	+	.	ID=comp156069_c0_seq1.mrna1;geneID=comp156069_c0_seq1.path1;Name=comp156069_c0_seq1;Dir=antisensecoverage=99.9;identity=97.8;matches=837;mismatches=18;indels=1;unknowns=0;locus=RLOC_00022658
Chr2	stalkie_big_nohaplotig	exon	149743682	149744084	98	+	.	Parent=comp156069_c0_seq1.mrna1;Target=comp156069_c0_seq1 453 855 -
Chr2	stalkie_big_nohaplotig	exon	149744161	149744298	98	+	.	Parent=comp156069_c0_seq1.mrna1;Target=comp156069_c0_seq1 315 452 -
Chr2	stalkie_big_nohaplotig	exon	149745474	149745788	96	+	.	Parent=comp156069_c0_seq1.mrna1;Target=comp156069_c0_seq1 1 314 -
Chr2	stalkie_big_nohaplotig	CDS	149743779	149744084	.	+	0	Parent=comp156069_c0_seq1.mrna1;Target=comp156069_c0_seq1 453 758 .
Chr2	stalkie_big_nohaplotig	CDS	149744161	149744298	.	+	0	Parent=comp156069_c0_seq1.mrna1;Target=comp156069_c0_seq1 315 452 .
Chr2	stalkie_big_nohaplotig	CDS	149745474	149745617	.	+	0	Parent=comp156069_c0_seq1.mrna1;Target=comp156069_c0_seq1 171 314 .
Chr2	gffcl	locus	149790464	149791436	.	-	.	ID=RLOC_00022659;geneIDs=comp151836_c1_seq1.path1;transcripts=comp151836_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149790464	149791436	.	-	.	ID=comp151836_c1_seq1.mrna1;geneID=comp151836_c1_seq1.path1;Name=comp151836_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=963;mismatches=9;indels=1;unknowns=0;Target=comp151836_c1_seq1 972 1 .;CDS_Target=comp151836_c1_seq1 914 795 .;locus=RLOC_00022659
Chr2	stalkie_big_nohaplotig	exon	149790464	149791436	98	-	.	Parent=comp151836_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	149790523	149790642	.	-	0	Parent=comp151836_c1_seq1.mrna1
Chr2	gffcl	locus	149830112	149830173	.	+	.	ID=RLOC_00022660;geneIDs=FBgn0016061.1.path2;transcripts=FBgn0016061.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	149830112	149830173	.	+	.	ID=FBgn0016061.1.mrna2;geneID=FBgn0016061.1.path2;Name=FBgn0016061.1;Dir=indeterminatecoverage=3.4;identity=100.0;matches=62;mismatches=0;indels=0;unknowns=0;Target=FBgn0016061.1 1848 1787 .;locus=RLOC_00022660
Chr2	stalkie_big_nohaplotig	exon	149830112	149830173	100	+	.	Parent=FBgn0016061.1.mrna2
Chr2	gffcl	locus	149830965	149831789	.	+	.	ID=RLOC_00022661;geneIDs=comp67612_c0_seq1.path1,comp143470_c0_seq1.path1;transcripts=comp143470_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149831200	149831789	.	+	.	ID=comp143470_c0_seq1.mrna1;geneID=comp143470_c0_seq1.path1;Name=comp143470_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.7;matches=586;mismatches=3;indels=17;unknowns=0;Target=comp143470_c0_seq1 605 1 .;CDS_Target=comp143470_c0_seq1 268 218 .;locus=RLOC_00022661
Chr2	stalkie_big_nohaplotig	exon	149831200	149831789	96	+	.	Parent=comp143470_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	149831402	149831452	.	+	0	Parent=comp143470_c0_seq1.mrna1
Chr2	gffcl	locus	149839669	149840736	.	-	.	ID=RLOC_00022662;geneIDs=comp143182_c0_seq1.path1;transcripts=comp143182_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149839669	149840736	.	-	.	ID=comp143182_c0_seq1.mrna1;geneID=comp143182_c0_seq1.path1;Name=comp143182_c0_seq1;Dir=indeterminatecoverage=98.5;identity=96.6;matches=1034;mismatches=34;indels=2;unknowns=0;Target=comp143182_c0_seq1 1070 1 .;CDS_Target=comp143182_c0_seq1 302 96 .;locus=RLOC_00022662
Chr2	stalkie_big_nohaplotig	exon	149839669	149840736	96	-	.	Parent=comp143182_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	149840436	149840641	.	-	0	Parent=comp143182_c0_seq1.mrna1
Chr2	gffcl	locus	149961527	149962727	.	+	.	ID=RLOC_00022663;geneIDs=comp150991_c0_seq1.path1;transcripts=comp150991_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	149961527	149962727	.	+	.	ID=comp150991_c0_seq1.mrna1;geneID=comp150991_c0_seq1.path1;Name=comp150991_c0_seq1;Dir=indeterminatecoverage=99.7;identity=98.1;matches=1178;mismatches=7;indels=16;unknowns=0;Target=comp150991_c0_seq1 1187 3 .;CDS_Target=comp150991_c0_seq1 69 4 .;locus=RLOC_00022663
Chr2	stalkie_big_nohaplotig	exon	149961527	149962727	98	+	.	Parent=comp150991_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	149961528	149961594	.	+	0	Parent=comp150991_c0_seq1.mrna1
Chr2	gffcl	locus	150058291	150062520	.	+	.	ID=RLOC_00022664;geneIDs=FBgn0027492.1.path1;transcripts=FBgn0027492.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150058291	150062520	.	+	.	ID=FBgn0027492.1.mrna1;geneID=FBgn0027492.1.path1;Name=FBgn0027492.1;Dir=sensecoverage=100.0;identity=100.0;matches=1542;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022664
Chr2	stalkie_big_nohaplotig	exon	150058291	150058432	100	+	.	Parent=FBgn0027492.1.mrna1;Target=FBgn0027492.1 1 142 +
Chr2	stalkie_big_nohaplotig	exon	150060047	150060246	100	+	.	Parent=FBgn0027492.1.mrna1;Target=FBgn0027492.1 143 342 +
Chr2	stalkie_big_nohaplotig	exon	150060320	150060514	100	+	.	Parent=FBgn0027492.1.mrna1;Target=FBgn0027492.1 343 537 +
Chr2	stalkie_big_nohaplotig	exon	150060579	150060769	100	+	.	Parent=FBgn0027492.1.mrna1;Target=FBgn0027492.1 538 728 +
Chr2	stalkie_big_nohaplotig	exon	150060843	150061176	100	+	.	Parent=FBgn0027492.1.mrna1;Target=FBgn0027492.1 729 1062 +
Chr2	stalkie_big_nohaplotig	exon	150061966	150062195	100	+	.	Parent=FBgn0027492.1.mrna1;Target=FBgn0027492.1 1063 1292 +
Chr2	stalkie_big_nohaplotig	exon	150062271	150062520	100	+	.	Parent=FBgn0027492.1.mrna1;Target=FBgn0027492.1 1293 1542 +
Chr2	stalkie_big_nohaplotig	CDS	150058291	150058432	.	+	0	Parent=FBgn0027492.1.mrna1;Target=FBgn0027492.1 1 142 +
Chr2	stalkie_big_nohaplotig	CDS	150060047	150060246	.	+	2	Parent=FBgn0027492.1.mrna1;Target=FBgn0027492.1 143 342 +
Chr2	stalkie_big_nohaplotig	CDS	150060320	150060514	.	+	0	Parent=FBgn0027492.1.mrna1;Target=FBgn0027492.1 343 537 +
Chr2	stalkie_big_nohaplotig	CDS	150060579	150060769	.	+	0	Parent=FBgn0027492.1.mrna1;Target=FBgn0027492.1 538 728 +
Chr2	stalkie_big_nohaplotig	CDS	150060843	150061176	.	+	1	Parent=FBgn0027492.1.mrna1;Target=FBgn0027492.1 729 1062 +
Chr2	stalkie_big_nohaplotig	CDS	150061966	150062195	.	+	0	Parent=FBgn0027492.1.mrna1;Target=FBgn0027492.1 1063 1292 +
Chr2	stalkie_big_nohaplotig	CDS	150062271	150062520	.	+	1	Parent=FBgn0027492.1.mrna1;Target=FBgn0027492.1 1293 1542 +
Chr2	gffcl	locus	150063408	150064590	.	-	.	ID=RLOC_00022665;geneIDs=comp156098_c1_seq1.path1;transcripts=comp156098_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150063408	150064590	.	-	.	ID=comp156098_c1_seq1.mrna1;geneID=comp156098_c1_seq1.path1;Name=comp156098_c1_seq1;Dir=indeterminatecoverage=99.6;identity=99.0;matches=1178;mismatches=5;indels=7;unknowns=0;Target=comp156098_c1_seq1 1194 5 .;CDS_Target=comp156098_c1_seq1 741 670 .;locus=RLOC_00022665
Chr2	stalkie_big_nohaplotig	exon	150063408	150064590	98	-	.	Parent=comp156098_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	150063857	150063928	.	-	0	Parent=comp156098_c1_seq1.mrna1
Chr2	gffcl	locus	150066846	150067770	.	.	.	ID=RLOC_00022666;geneIDs=comp140935_c0_seq1.path1,comp186708_c0_seq1.path1;transcripts=comp186708_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150067108	150067770	.	+	.	ID=comp186708_c0_seq1.mrna1;geneID=comp186708_c0_seq1.path1;Name=comp186708_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.4;matches=660;mismatches=2;indels=2;unknowns=0;Target=comp186708_c0_seq1 663 1 .;CDS_Target=comp186708_c0_seq1 200 114 .;locus=RLOC_00022666
Chr2	stalkie_big_nohaplotig	exon	150067108	150067770	99	+	.	Parent=comp186708_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	150067221	150067307	.	+	0	Parent=comp186708_c0_seq1.mrna1
Chr2	gffcl	locus	150070779	150072387	.	+	.	ID=RLOC_00022667;geneIDs=FBgn0039525.1.path1;transcripts=FBgn0039525.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150070779	150072387	.	+	.	ID=FBgn0039525.1.mrna1;geneID=FBgn0039525.1.path1;Name=FBgn0039525.1;Dir=sensecoverage=100.0;identity=99.1;matches=928;mismatches=8;indels=0;unknowns=0;locus=RLOC_00022667
Chr2	stalkie_big_nohaplotig	exon	150070779	150070842	100	+	.	Parent=FBgn0039525.1.mrna1;Target=FBgn0039525.1 1 64 +
Chr2	stalkie_big_nohaplotig	exon	150071314	150071426	100	+	.	Parent=FBgn0039525.1.mrna1;Target=FBgn0039525.1 65 177 +
Chr2	stalkie_big_nohaplotig	exon	150071494	150071734	98	+	.	Parent=FBgn0039525.1.mrna1;Target=FBgn0039525.1 178 418 +
Chr2	stalkie_big_nohaplotig	exon	150071798	150072183	98	+	.	Parent=FBgn0039525.1.mrna1;Target=FBgn0039525.1 419 804 +
Chr2	stalkie_big_nohaplotig	exon	150072256	150072387	100	+	.	Parent=FBgn0039525.1.mrna1;Target=FBgn0039525.1 805 936 +
Chr2	stalkie_big_nohaplotig	CDS	150070779	150070842	.	+	0	Parent=FBgn0039525.1.mrna1;Target=FBgn0039525.1 1 64 +
Chr2	stalkie_big_nohaplotig	CDS	150071314	150071426	.	+	2	Parent=FBgn0039525.1.mrna1;Target=FBgn0039525.1 65 177 +
Chr2	stalkie_big_nohaplotig	CDS	150071494	150071734	.	+	0	Parent=FBgn0039525.1.mrna1;Target=FBgn0039525.1 178 418 +
Chr2	stalkie_big_nohaplotig	CDS	150071798	150072183	.	+	2	Parent=FBgn0039525.1.mrna1;Target=FBgn0039525.1 419 804 +
Chr2	stalkie_big_nohaplotig	CDS	150072256	150072387	.	+	0	Parent=FBgn0039525.1.mrna1;Target=FBgn0039525.1 805 936 +
Chr2	gffcl	locus	150085813	150086328	.	-	.	ID=RLOC_00022668;geneIDs=comp146708_c0_seq1.path1;transcripts=comp146708_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150085813	150086328	.	-	.	ID=comp146708_c0_seq1.mrna1;geneID=comp146708_c0_seq1.path1;Name=comp146708_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=513;mismatches=3;indels=6;unknowns=0;Target=comp146708_c0_seq1 522 1 .;CDS_Target=comp146708_c0_seq1 85 2 .;locus=RLOC_00022668
Chr2	stalkie_big_nohaplotig	exon	150085813	150086328	98	-	.	Parent=comp146708_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	150086245	150086327	.	-	0	Parent=comp146708_c0_seq1.mrna1
Chr2	gffcl	locus	150090223	150127543	.	+	.	ID=RLOC_00022669;geneIDs=FBgn0004387.1.path1,comp161466_c1_seq1.path1;transcripts=FBgn0004387.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150090223	150127271	.	+	.	ID=FBgn0004387.1.mrna1;geneID=FBgn0004387.1.path1;Name=FBgn0004387.1;Dir=sensecoverage=100.0;identity=99.0;matches=3829;mismatches=32;indels=6;unknowns=0;locus=RLOC_00022669
Chr2	stalkie_big_nohaplotig	exon	150090223	150090272	100	+	.	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 1 50 +
Chr2	stalkie_big_nohaplotig	exon	150107141	150107364	100	+	.	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 51 274 +
Chr2	stalkie_big_nohaplotig	exon	150119421	150119734	98	+	.	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 275 588 +
Chr2	stalkie_big_nohaplotig	exon	150119814	150119983	99	+	.	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 589 758 +
Chr2	stalkie_big_nohaplotig	exon	150122027	150122447	99	+	.	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 759 1179 +
Chr2	stalkie_big_nohaplotig	exon	150122510	150122746	100	+	.	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 1180 1416 +
Chr2	stalkie_big_nohaplotig	exon	150122816	150123325	100	+	.	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 1417 1926 +
Chr2	stalkie_big_nohaplotig	exon	150124456	150124629	100	+	.	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 1927 2100 +
Chr2	stalkie_big_nohaplotig	exon	150125069	150125191	100	+	.	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 2101 2223 +
Chr2	stalkie_big_nohaplotig	exon	150125328	150125441	99	+	.	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 2224 2337 +
Chr2	stalkie_big_nohaplotig	exon	150125513	150125697	98	+	.	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 2338 2522 +
Chr2	stalkie_big_nohaplotig	exon	150125771	150126690	97	+	.	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 2523 3448 +
Chr2	stalkie_big_nohaplotig	exon	150126791	150126969	99	+	.	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 3449 3627 +
Chr2	stalkie_big_nohaplotig	exon	150127032	150127271	100	+	.	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 3628 3867 +
Chr2	stalkie_big_nohaplotig	CDS	150090223	150090272	.	+	0	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 1 50 +
Chr2	stalkie_big_nohaplotig	CDS	150107141	150107364	.	+	1	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 51 274 +
Chr2	stalkie_big_nohaplotig	CDS	150119421	150119734	.	+	2	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 275 588 +
Chr2	stalkie_big_nohaplotig	CDS	150119814	150119983	.	+	0	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 589 758 +
Chr2	stalkie_big_nohaplotig	CDS	150122027	150122447	.	+	1	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 759 1179 +
Chr2	stalkie_big_nohaplotig	CDS	150122510	150122746	.	+	0	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 1180 1416 +
Chr2	stalkie_big_nohaplotig	CDS	150122816	150123325	.	+	0	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 1417 1926 +
Chr2	stalkie_big_nohaplotig	CDS	150124456	150124629	.	+	0	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 1927 2100 +
Chr2	stalkie_big_nohaplotig	CDS	150125069	150125191	.	+	0	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 2101 2223 +
Chr2	stalkie_big_nohaplotig	CDS	150125328	150125441	.	+	0	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 2224 2337 +
Chr2	stalkie_big_nohaplotig	CDS	150125513	150125697	.	+	0	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 2338 2522 +
Chr2	stalkie_big_nohaplotig	CDS	150125771	150126690	.	+	1	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 2523 3448 +
Chr2	stalkie_big_nohaplotig	CDS	150126791	150126969	.	+	2	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 3449 3627 +
Chr2	stalkie_big_nohaplotig	CDS	150127032	150127271	.	+	0	Parent=FBgn0004387.1.mrna1;Target=FBgn0004387.1 3628 3867 +
Chr2	gffcl	locus	150128896	150129813	.	+	.	ID=RLOC_00022670;geneIDs=comp142790_c0_seq1.path1;transcripts=comp142790_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150128896	150129813	.	+	.	ID=comp142790_c0_seq1.mrna1;geneID=comp142790_c0_seq1.path1;Name=comp142790_c0_seq1;Dir=indeterminatecoverage=96.7;identity=98.9;matches=909;mismatches=8;indels=2;unknowns=0;Target=comp142790_c0_seq1 939 22 .;CDS_Target=comp142790_c0_seq1 609 508 .;locus=RLOC_00022670
Chr2	stalkie_big_nohaplotig	exon	150128896	150129813	98	+	.	Parent=comp142790_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	150129382	150129483	.	+	0	Parent=comp142790_c0_seq1.mrna1
Chr2	gffcl	locus	150169523	150171707	.	+	.	ID=RLOC_00022671;geneIDs=FBgn0040080.1.path1;transcripts=FBgn0040080.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150169523	150171707	.	+	.	ID=FBgn0040080.1.mrna1;geneID=FBgn0040080.1.path1;Name=FBgn0040080.1;Dir=sensecoverage=100.0;identity=99.8;matches=1979;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022671
Chr2	stalkie_big_nohaplotig	exon	150169523	150169900	99	+	.	Parent=FBgn0040080.1.mrna1;Target=FBgn0040080.1 1 378 +
Chr2	stalkie_big_nohaplotig	exon	150169968	150170265	100	+	.	Parent=FBgn0040080.1.mrna1;Target=FBgn0040080.1 379 676 +
Chr2	stalkie_big_nohaplotig	exon	150170334	150170920	99	+	.	Parent=FBgn0040080.1.mrna1;Target=FBgn0040080.1 677 1263 +
Chr2	stalkie_big_nohaplotig	exon	150170988	150171707	100	+	.	Parent=FBgn0040080.1.mrna1;Target=FBgn0040080.1 1264 1983 +
Chr2	stalkie_big_nohaplotig	CDS	150169523	150169900	.	+	0	Parent=FBgn0040080.1.mrna1;Target=FBgn0040080.1 1 378 +
Chr2	stalkie_big_nohaplotig	CDS	150169968	150170265	.	+	0	Parent=FBgn0040080.1.mrna1;Target=FBgn0040080.1 379 676 +
Chr2	stalkie_big_nohaplotig	CDS	150170334	150170920	.	+	2	Parent=FBgn0040080.1.mrna1;Target=FBgn0040080.1 677 1263 +
Chr2	stalkie_big_nohaplotig	CDS	150170988	150171707	.	+	0	Parent=FBgn0040080.1.mrna1;Target=FBgn0040080.1 1264 1983 +
Chr2	gffcl	locus	150174624	150187339	.	-	.	ID=RLOC_00022672;geneIDs=FBgn0039527.1.path1;transcripts=FBgn0039527.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150174624	150187339	.	-	.	ID=FBgn0039527.1.mrna1;geneID=FBgn0039527.1.path1;Name=FBgn0039527.1;Dir=sensecoverage=100.0;identity=99.7;matches=4665;mismatches=12;indels=0;unknowns=0;locus=RLOC_00022672
Chr2	stalkie_big_nohaplotig	exon	150174624	150176017	99	-	.	Parent=FBgn0039527.1.mrna1;Target=FBgn0039527.1 3284 4677 +
Chr2	stalkie_big_nohaplotig	exon	150176079	150176267	100	-	.	Parent=FBgn0039527.1.mrna1;Target=FBgn0039527.1 3095 3283 +
Chr2	stalkie_big_nohaplotig	exon	150176323	150177780	100	-	.	Parent=FBgn0039527.1.mrna1;Target=FBgn0039527.1 1637 3094 +
Chr2	stalkie_big_nohaplotig	exon	150177841	150178041	100	-	.	Parent=FBgn0039527.1.mrna1;Target=FBgn0039527.1 1436 1636 +
Chr2	stalkie_big_nohaplotig	exon	150178119	150178347	100	-	.	Parent=FBgn0039527.1.mrna1;Target=FBgn0039527.1 1207 1435 +
Chr2	stalkie_big_nohaplotig	exon	150178410	150179482	99	-	.	Parent=FBgn0039527.1.mrna1;Target=FBgn0039527.1 134 1206 +
Chr2	stalkie_big_nohaplotig	exon	150187207	150187339	99	-	.	Parent=FBgn0039527.1.mrna1;Target=FBgn0039527.1 1 133 +
Chr2	stalkie_big_nohaplotig	CDS	150174624	150176017	.	-	2	Parent=FBgn0039527.1.mrna1;Target=FBgn0039527.1 3284 4677 +
Chr2	stalkie_big_nohaplotig	CDS	150176079	150176267	.	-	2	Parent=FBgn0039527.1.mrna1;Target=FBgn0039527.1 3095 3283 +
Chr2	stalkie_big_nohaplotig	CDS	150176323	150177780	.	-	2	Parent=FBgn0039527.1.mrna1;Target=FBgn0039527.1 1637 3094 +
Chr2	stalkie_big_nohaplotig	CDS	150177841	150178041	.	-	2	Parent=FBgn0039527.1.mrna1;Target=FBgn0039527.1 1436 1636 +
Chr2	stalkie_big_nohaplotig	CDS	150178119	150178347	.	-	0	Parent=FBgn0039527.1.mrna1;Target=FBgn0039527.1 1207 1435 +
Chr2	stalkie_big_nohaplotig	CDS	150178410	150179482	.	-	2	Parent=FBgn0039527.1.mrna1;Target=FBgn0039527.1 134 1206 +
Chr2	stalkie_big_nohaplotig	CDS	150187207	150187339	.	-	0	Parent=FBgn0039527.1.mrna1;Target=FBgn0039527.1 1 133 +
Chr2	gffcl	locus	150207271	150207882	.	-	.	ID=RLOC_00022673;geneIDs=comp155622_c0_seq1.path1;transcripts=comp155622_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150207271	150207882	.	-	.	ID=comp155622_c0_seq1.mrna1;geneID=comp155622_c0_seq1.path1;Name=comp155622_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.3;matches=609;mismatches=3;indels=1;unknowns=0;Target=comp155622_c0_seq1 614 2 .;CDS_Target=comp155622_c0_seq1 34 2 .;locus=RLOC_00022673
Chr2	stalkie_big_nohaplotig	exon	150207271	150207882	99	-	.	Parent=comp155622_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	150207851	150207882	.	-	0	Parent=comp155622_c0_seq1.mrna1
Chr2	gffcl	locus	150240858	150293921	.	+	.	ID=RLOC_00022675;geneIDs=FBgn0039530.1.path1;transcripts=FBgn0039530.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150240858	150293921	.	+	.	ID=FBgn0039530.1.mrna1;geneID=FBgn0039530.1.path1;Name=FBgn0039530.1;Dir=sensecoverage=100.0;identity=99.3;matches=3978;mismatches=26;indels=1;unknowns=0;locus=RLOC_00022675
Chr2	stalkie_big_nohaplotig	exon	150240858	150240971	99	+	.	Parent=FBgn0039530.1.mrna1;Target=FBgn0039530.1 1 114 +
Chr2	stalkie_big_nohaplotig	exon	150287302	150287466	100	+	.	Parent=FBgn0039530.1.mrna1;Target=FBgn0039530.1 115 279 +
Chr2	stalkie_big_nohaplotig	exon	150288322	150288781	99	+	.	Parent=FBgn0039530.1.mrna1;Target=FBgn0039530.1 280 739 +
Chr2	stalkie_big_nohaplotig	exon	150288848	150289356	99	+	.	Parent=FBgn0039530.1.mrna1;Target=FBgn0039530.1 740 1248 +
Chr2	stalkie_big_nohaplotig	exon	150289418	150289646	100	+	.	Parent=FBgn0039530.1.mrna1;Target=FBgn0039530.1 1249 1477 +
Chr2	stalkie_big_nohaplotig	exon	150289716	150289981	99	+	.	Parent=FBgn0039530.1.mrna1;Target=FBgn0039530.1 1478 1743 +
Chr2	stalkie_big_nohaplotig	exon	150291512	150292819	99	+	.	Parent=FBgn0039530.1.mrna1;Target=FBgn0039530.1 1744 3051 +
Chr2	stalkie_big_nohaplotig	exon	150292895	150293620	99	+	.	Parent=FBgn0039530.1.mrna1;Target=FBgn0039530.1 3052 3777 +
Chr2	stalkie_big_nohaplotig	exon	150293695	150293921	99	+	.	Parent=FBgn0039530.1.mrna1;Target=FBgn0039530.1 3778 4005 +
Chr2	stalkie_big_nohaplotig	CDS	150240858	150240971	.	+	0	Parent=FBgn0039530.1.mrna1;Target=FBgn0039530.1 1 114 +
Chr2	stalkie_big_nohaplotig	CDS	150287302	150287466	.	+	0	Parent=FBgn0039530.1.mrna1;Target=FBgn0039530.1 115 279 +
Chr2	stalkie_big_nohaplotig	CDS	150288322	150288781	.	+	0	Parent=FBgn0039530.1.mrna1;Target=FBgn0039530.1 280 739 +
Chr2	stalkie_big_nohaplotig	CDS	150288848	150289356	.	+	2	Parent=FBgn0039530.1.mrna1;Target=FBgn0039530.1 740 1248 +
Chr2	stalkie_big_nohaplotig	CDS	150289418	150289646	.	+	0	Parent=FBgn0039530.1.mrna1;Target=FBgn0039530.1 1249 1477 +
Chr2	stalkie_big_nohaplotig	CDS	150289716	150289981	.	+	2	Parent=FBgn0039530.1.mrna1;Target=FBgn0039530.1 1478 1743 +
Chr2	stalkie_big_nohaplotig	CDS	150291512	150292819	.	+	0	Parent=FBgn0039530.1.mrna1;Target=FBgn0039530.1 1744 3051 +
Chr2	stalkie_big_nohaplotig	CDS	150292895	150293620	.	+	0	Parent=FBgn0039530.1.mrna1;Target=FBgn0039530.1 3052 3777 +
Chr2	stalkie_big_nohaplotig	CDS	150293695	150293921	.	+	0	Parent=FBgn0039530.1.mrna1;Target=FBgn0039530.1 3778 4005 +
Chr2	gffcl	locus	150269563	150270493	.	-	.	ID=RLOC_00022676;geneIDs=FBgn0039529.1.path1;transcripts=FBgn0039529.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150269563	150270493	.	-	.	ID=FBgn0039529.1.mrna1;geneID=FBgn0039529.1.path1;Name=FBgn0039529.1;Dir=sensecoverage=100.0;identity=98.7;matches=770;mismatches=10;indels=0;unknowns=0;locus=RLOC_00022676
Chr2	stalkie_big_nohaplotig	exon	150269563	150270069	99	-	.	Parent=FBgn0039529.1.mrna1;Target=FBgn0039529.1 274 780 +
Chr2	stalkie_big_nohaplotig	exon	150270134	150270261	99	-	.	Parent=FBgn0039529.1.mrna1;Target=FBgn0039529.1 146 273 +
Chr2	stalkie_big_nohaplotig	exon	150270349	150270493	97	-	.	Parent=FBgn0039529.1.mrna1;Target=FBgn0039529.1 1 145 +
Chr2	stalkie_big_nohaplotig	CDS	150269563	150270069	.	-	0	Parent=FBgn0039529.1.mrna1;Target=FBgn0039529.1 274 780 +
Chr2	stalkie_big_nohaplotig	CDS	150270134	150270261	.	-	2	Parent=FBgn0039529.1.mrna1;Target=FBgn0039529.1 146 273 +
Chr2	stalkie_big_nohaplotig	CDS	150270349	150270493	.	-	0	Parent=FBgn0039529.1.mrna1;Target=FBgn0039529.1 1 145 +
Chr2	gffcl	locus	150271008	150271853	.	+	.	ID=RLOC_00022677;geneIDs=comp73850_c0_seq1.path1;transcripts=comp73850_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150271008	150271853	.	+	.	ID=comp73850_c0_seq1.mrna1;geneID=comp73850_c0_seq1.path1;Name=comp73850_c0_seq1;Dir=indeterminatecoverage=97.0;identity=95.2;matches=738;mismatches=31;indels=6;unknowns=0;Target=comp73850_c0_seq1 772 650 .;locus=RLOC_00022677
Chr2	stalkie_big_nohaplotig	exon	150271008	150271383	95	+	.	Parent=comp73850_c0_seq1.mrna1;Target=comp73850_c0_seq1 380 1 .
Chr2	stalkie_big_nohaplotig	exon	150271460	150271853	94	+	.	Parent=comp73850_c0_seq1.mrna1;Target=comp73850_c0_seq1 774 381 .
Chr2	stalkie_big_nohaplotig	CDS	150271729	150271851	.	+	0	Parent=comp73850_c0_seq1.mrna1
Chr2	gffcl	locus	150295591	150295883	.	+	.	ID=RLOC_00022678;geneIDs=comp119042_c0_seq1.path1;transcripts=comp119042_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150295591	150295883	.	+	.	ID=comp119042_c0_seq1.mrna1;geneID=comp119042_c0_seq1.path1;Name=comp119042_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=292;mismatches=1;indels=0;unknowns=0;Target=comp119042_c0_seq1 293 1 .;CDS_Target=comp119042_c0_seq1 263 183 .;locus=RLOC_00022678
Chr2	stalkie_big_nohaplotig	exon	150295591	150295883	99	+	.	Parent=comp119042_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	150295773	150295853	.	+	0	Parent=comp119042_c0_seq1.mrna1
Chr2	gffcl	locus	150297284	150298419	.	+	.	ID=RLOC_00022679;geneIDs=FBgn0039531.1.path1;transcripts=FBgn0039531.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150297284	150298419	.	+	.	ID=FBgn0039531.1.mrna1;geneID=FBgn0039531.1.path1;Name=FBgn0039531.1;Dir=sensecoverage=100.0;identity=99.4;matches=1005;mismatches=6;indels=0;unknowns=0;locus=RLOC_00022679
Chr2	stalkie_big_nohaplotig	exon	150297284	150297407	95	+	.	Parent=FBgn0039531.1.mrna1;Target=FBgn0039531.1 1 124 +
Chr2	stalkie_big_nohaplotig	exon	150297461	150298225	100	+	.	Parent=FBgn0039531.1.mrna1;Target=FBgn0039531.1 125 889 +
Chr2	stalkie_big_nohaplotig	exon	150298298	150298419	99	+	.	Parent=FBgn0039531.1.mrna1;Target=FBgn0039531.1 890 1011 +
Chr2	stalkie_big_nohaplotig	CDS	150297284	150297407	.	+	0	Parent=FBgn0039531.1.mrna1;Target=FBgn0039531.1 1 124 +
Chr2	stalkie_big_nohaplotig	CDS	150297461	150298225	.	+	2	Parent=FBgn0039531.1.mrna1;Target=FBgn0039531.1 125 889 +
Chr2	stalkie_big_nohaplotig	CDS	150298298	150298419	.	+	2	Parent=FBgn0039531.1.mrna1;Target=FBgn0039531.1 890 1011 +
Chr2	gffcl	locus	150299832	150301007	.	+	.	ID=RLOC_00022680;geneIDs=FBgn0038049.1.path1;transcripts=FBgn0038049.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150299832	150301007	.	+	.	ID=FBgn0038049.1.mrna1;geneID=FBgn0038049.1.path1;Name=FBgn0038049.1;Dir=sensecoverage=100.0;identity=99.1;matches=1052;mismatches=10;indels=0;unknowns=0;locus=RLOC_00022680
Chr2	stalkie_big_nohaplotig	exon	150299832	150299937	100	+	.	Parent=FBgn0038049.1.mrna1;Target=FBgn0038049.1 1 106 +
Chr2	stalkie_big_nohaplotig	exon	150299992	150300768	99	+	.	Parent=FBgn0038049.1.mrna1;Target=FBgn0038049.1 107 883 +
Chr2	stalkie_big_nohaplotig	exon	150300829	150301007	98	+	.	Parent=FBgn0038049.1.mrna1;Target=FBgn0038049.1 884 1062 +
Chr2	stalkie_big_nohaplotig	CDS	150299832	150299937	.	+	0	Parent=FBgn0038049.1.mrna1;Target=FBgn0038049.1 1 106 +
Chr2	stalkie_big_nohaplotig	CDS	150299992	150300768	.	+	2	Parent=FBgn0038049.1.mrna1;Target=FBgn0038049.1 107 883 +
Chr2	stalkie_big_nohaplotig	CDS	150300829	150301007	.	+	2	Parent=FBgn0038049.1.mrna1;Target=FBgn0038049.1 884 1062 +
Chr2	gffcl	locus	150301608	150302573	.	-	.	ID=RLOC_00022681;geneIDs=ORF2209.path1;transcripts=ORF2209.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150301608	150302573	.	-	.	ID=ORF2209.mrna1;geneID=ORF2209.path1;Name=ORF2209;Dir=sensecoverage=100.0;identity=99.2;matches=890;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022681
Chr2	stalkie_big_nohaplotig	exon	150301608	150302158	98	-	.	Parent=ORF2209.mrna1;Target=ORF2209 347 897 +
Chr2	stalkie_big_nohaplotig	exon	150302228	150302573	100	-	.	Parent=ORF2209.mrna1;Target=ORF2209 1 346 +
Chr2	stalkie_big_nohaplotig	CDS	150301608	150302158	.	-	2	Parent=ORF2209.mrna1;Target=ORF2209 347 897 +
Chr2	stalkie_big_nohaplotig	CDS	150302228	150302573	.	-	0	Parent=ORF2209.mrna1;Target=ORF2209 1 346 +
Chr2	gffcl	locus	150305122	150309575	.	.	.	ID=RLOC_00022682;geneIDs=FBgn0086687.2.path1,comp157756_c0_seq1.path1;transcripts=FBgn0086687.2.mrna1,comp157756_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150305122	150309575	.	-	.	ID=FBgn0086687.2.mrna1;geneID=FBgn0086687.2.path1;Name=FBgn0086687.2;Dir=sensecoverage=100.0;identity=99.5;matches=1188;mismatches=5;indels=1;unknowns=0;locus=RLOC_00022682
Chr2	stalkie_big_nohaplotig	exon	150305122	150305487	98	-	.	Parent=FBgn0086687.2.mrna1;Target=FBgn0086687.2 828 1194 +
Chr2	stalkie_big_nohaplotig	exon	150305552	150305737	99	-	.	Parent=FBgn0086687.2.mrna1;Target=FBgn0086687.2 642 827 +
Chr2	stalkie_big_nohaplotig	exon	150305797	150306133	100	-	.	Parent=FBgn0086687.2.mrna1;Target=FBgn0086687.2 305 641 +
Chr2	stalkie_big_nohaplotig	exon	150309194	150309388	100	-	.	Parent=FBgn0086687.2.mrna1;Target=FBgn0086687.2 110 304 +
Chr2	stalkie_big_nohaplotig	exon	150309467	150309575	100	-	.	Parent=FBgn0086687.2.mrna1;Target=FBgn0086687.2 1 109 +
Chr2	stalkie_big_nohaplotig	CDS	150305122	150305487	.	-	1	Parent=FBgn0086687.2.mrna1;Target=FBgn0086687.2 828 1194 +
Chr2	stalkie_big_nohaplotig	CDS	150305552	150305737	.	-	1	Parent=FBgn0086687.2.mrna1;Target=FBgn0086687.2 642 827 +
Chr2	stalkie_big_nohaplotig	CDS	150305797	150306133	.	-	2	Parent=FBgn0086687.2.mrna1;Target=FBgn0086687.2 305 641 +
Chr2	stalkie_big_nohaplotig	CDS	150309194	150309388	.	-	2	Parent=FBgn0086687.2.mrna1;Target=FBgn0086687.2 110 304 +
Chr2	stalkie_big_nohaplotig	CDS	150309467	150309575	.	-	0	Parent=FBgn0086687.2.mrna1;Target=FBgn0086687.2 1 109 +
Chr2	stalkie_big_nohaplotig	mRNA	150307885	150309216	.	+	.	ID=comp157756_c0_seq1.mrna1;geneID=comp157756_c0_seq1.path1;Name=comp157756_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=1313;mismatches=19;indels=7;unknowns=0;Target=comp157756_c0_seq1 1339 1 .;CDS_Target=comp157756_c0_seq1 559 455 .;locus=RLOC_00022682
Chr2	stalkie_big_nohaplotig	exon	150307885	150309216	98	+	.	Parent=comp157756_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	150308333	150308437	.	+	0	Parent=comp157756_c0_seq1.mrna1
Chr2	gffcl	locus	150306427	150307825	.	-	.	ID=RLOC_00022683;geneIDs=ORF936.path1;transcripts=ORF936.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150306427	150307825	.	-	.	ID=ORF936.mrna1;geneID=ORF936.path1;Name=ORF936;Dir=sensecoverage=100.0;identity=98.9;matches=1323;mismatches=15;indels=0;unknowns=0;locus=RLOC_00022683
Chr2	stalkie_big_nohaplotig	exon	150306427	150307281	98	-	.	Parent=ORF936.mrna1;Target=ORF936 484 1338 +
Chr2	stalkie_big_nohaplotig	exon	150307343	150307825	99	-	.	Parent=ORF936.mrna1;Target=ORF936 1 483 +
Chr2	stalkie_big_nohaplotig	CDS	150306427	150307281	.	-	0	Parent=ORF936.mrna1;Target=ORF936 484 1338 +
Chr2	stalkie_big_nohaplotig	CDS	150307343	150307825	.	-	0	Parent=ORF936.mrna1;Target=ORF936 1 483 +
Chr2	gffcl	locus	150311103	150312661	.	-	.	ID=RLOC_00022684;geneIDs=comp147693_c0_seq1.path1;transcripts=comp147693_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150311103	150312661	.	-	.	ID=comp147693_c0_seq1.mrna1;geneID=comp147693_c0_seq1.path1;Name=comp147693_c0_seq1;Dir=indeterminatecoverage=98.9;identity=94.7;matches=1496;mismatches=32;indels=52;unknowns=0;Target=comp147693_c0_seq1 1566 18 .;CDS_Target=comp147693_c0_seq1 96 67 .;locus=RLOC_00022684
Chr2	stalkie_big_nohaplotig	exon	150311103	150312661	94	-	.	Parent=comp147693_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	150312581	150312612	.	-	0	Parent=comp147693_c0_seq1.mrna1
Chr2	gffcl	locus	150340006	150340710	.	+	.	ID=RLOC_00022685;geneIDs=FBgn0024912.1.path1;transcripts=FBgn0024912.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150340006	150340710	.	+	.	ID=FBgn0024912.1.mrna1;geneID=FBgn0024912.1.path1;Name=FBgn0024912.1;Dir=indeterminatecoverage=100.0;identity=97.2;matches=685;mismatches=20;indels=0;unknowns=0;Target=FBgn0024912.1 705 1 .;locus=RLOC_00022685
Chr2	stalkie_big_nohaplotig	exon	150340006	150340710	97	+	.	Parent=FBgn0024912.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	150340006	150340710	.	+	0	Parent=FBgn0024912.1.mrna1
Chr2	gffcl	locus	150341772	150343566	.	-	.	ID=RLOC_00022686;geneIDs=FBgn0086687.1.path1,comp144200_c0_seq1.path1;transcripts=FBgn0086687.1.mrna1,comp144200_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150341772	150343566	.	-	.	ID=FBgn0086687.1.mrna1;geneID=FBgn0086687.1.path1;Name=FBgn0086687.1;Dir=sensecoverage=99.9;identity=98.9;matches=1120;mismatches=13;indels=0;unknowns=0;locus=RLOC_00022686
Chr2	stalkie_big_nohaplotig	exon	150341772	150342087	98	-	.	Parent=FBgn0086687.1.mrna1;Target=FBgn0086687.1 819 1134 +
Chr2	stalkie_big_nohaplotig	exon	150342155	150342340	99	-	.	Parent=FBgn0086687.1.mrna1;Target=FBgn0086687.1 633 818 +
Chr2	stalkie_big_nohaplotig	exon	150342404	150342740	99	-	.	Parent=FBgn0086687.1.mrna1;Target=FBgn0086687.1 296 632 +
Chr2	stalkie_big_nohaplotig	exon	150343273	150343566	98	-	.	Parent=FBgn0086687.1.mrna1;Target=FBgn0086687.1 2 295 +
Chr2	stalkie_big_nohaplotig	CDS	150341772	150342087	.	-	1	Parent=FBgn0086687.1.mrna1;Target=FBgn0086687.1 819 1134 +
Chr2	stalkie_big_nohaplotig	CDS	150342155	150342340	.	-	1	Parent=FBgn0086687.1.mrna1;Target=FBgn0086687.1 633 818 +
Chr2	stalkie_big_nohaplotig	CDS	150342404	150342740	.	-	2	Parent=FBgn0086687.1.mrna1;Target=FBgn0086687.1 296 632 +
Chr2	stalkie_big_nohaplotig	CDS	150343273	150343564	.	-	0	Parent=FBgn0086687.1.mrna1;Target=FBgn0086687.1 4 295 +
Chr2	stalkie_big_nohaplotig	mRNA	150342718	150343295	.	-	.	ID=comp144200_c0_seq1.mrna1;geneID=comp144200_c0_seq1.path1;Name=comp144200_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.9;matches=571;mismatches=7;indels=43;unknowns=0;Target=comp144200_c0_seq1 621 1 .;CDS_Target=comp144200_c0_seq1 379 314 .;locus=RLOC_00022686
Chr2	stalkie_big_nohaplotig	exon	150342718	150343295	91	-	.	Parent=comp144200_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	150342960	150343025	.	-	0	Parent=comp144200_c0_seq1.mrna1
Chr2	gffcl	locus	150343568	150344401	.	+	.	ID=RLOC_00022687;geneIDs=comp154507_c0_seq1.path1;transcripts=comp154507_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150343568	150344401	.	+	.	ID=comp154507_c0_seq1.mrna1;geneID=comp154507_c0_seq1.path1;Name=comp154507_c0_seq1;Dir=antisensecoverage=100.0;identity=98.1;matches=740;mismatches=8;indels=6;unknowns=0;Target=comp154507_c0_seq1 265 366 .;locus=RLOC_00022687
Chr2	stalkie_big_nohaplotig	exon	150343568	150343598	100	+	.	Parent=comp154507_c0_seq1.mrna1;Target=comp154507_c0_seq1 721 751 -
Chr2	stalkie_big_nohaplotig	exon	150343682	150344401	98	+	.	Parent=comp154507_c0_seq1.mrna1;Target=comp154507_c0_seq1 1 720 -
Chr2	stalkie_big_nohaplotig	CDS	150344035	150344136	.	+	0	Parent=comp154507_c0_seq1.mrna1
Chr2	gffcl	locus	150361505	150362973	.	+	.	ID=RLOC_00022688;geneIDs=FBgn0051104.1.path1;transcripts=FBgn0051104.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150361505	150362973	.	+	.	ID=FBgn0051104.1.mrna1;geneID=FBgn0051104.1.path1;Name=FBgn0051104.1;Dir=sensecoverage=100.0;identity=99.0;matches=1253;mismatches=13;indels=0;unknowns=0;locus=RLOC_00022688
Chr2	stalkie_big_nohaplotig	exon	150361505	150361896	98	+	.	Parent=FBgn0051104.1.mrna1;Target=FBgn0051104.1 1 392 +
Chr2	stalkie_big_nohaplotig	exon	150361958	150362126	99	+	.	Parent=FBgn0051104.1.mrna1;Target=FBgn0051104.1 393 561 +
Chr2	stalkie_big_nohaplotig	exon	150362190	150362718	98	+	.	Parent=FBgn0051104.1.mrna1;Target=FBgn0051104.1 562 1090 +
Chr2	stalkie_big_nohaplotig	exon	150362798	150362973	100	+	.	Parent=FBgn0051104.1.mrna1;Target=FBgn0051104.1 1091 1266 +
Chr2	stalkie_big_nohaplotig	CDS	150361505	150361896	.	+	0	Parent=FBgn0051104.1.mrna1;Target=FBgn0051104.1 1 392 +
Chr2	stalkie_big_nohaplotig	CDS	150361958	150362126	.	+	1	Parent=FBgn0051104.1.mrna1;Target=FBgn0051104.1 393 561 +
Chr2	stalkie_big_nohaplotig	CDS	150362190	150362718	.	+	0	Parent=FBgn0051104.1.mrna1;Target=FBgn0051104.1 562 1090 +
Chr2	stalkie_big_nohaplotig	CDS	150362798	150362973	.	+	2	Parent=FBgn0051104.1.mrna1;Target=FBgn0051104.1 1091 1266 +
Chr2	gffcl	locus	150372612	152305925	.	+	.	ID=RLOC_00022689;geneIDs=comp156036_c0_seq1.path1;transcripts=comp156036_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150372612	152305925	.	+	.	ID=comp156036_c0_seq1.mrna1;geneID=comp156036_c0_seq1.path1;Name=comp156036_c0_seq1;Dir=antisensecoverage=95.5;identity=98.1;matches=2521;mismatches=35;indels=13;unknowns=0;Target=comp156036_c0_seq1 443 736 .;locus=RLOC_00022689
Chr2	stalkie_big_nohaplotig	exon	150372612	150372614	100	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 2564 2566 -
Chr2	stalkie_big_nohaplotig	exon	150386951	150386952	100	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 2562 2563 -
Chr2	stalkie_big_nohaplotig	exon	150390028	150390037	100	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 2552 2561 -
Chr2	stalkie_big_nohaplotig	exon	150391171	150391181	100	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 2541 2551 -
Chr2	stalkie_big_nohaplotig	exon	150403731	150403734	100	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 2537 2540 -
Chr2	stalkie_big_nohaplotig	exon	150408759	150408762	100	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 2533 2536 -
Chr2	stalkie_big_nohaplotig	exon	150421991	150421995	100	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 2528 2532 -
Chr2	stalkie_big_nohaplotig	exon	150427523	150427528	83	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 2522 2527 -
Chr2	stalkie_big_nohaplotig	exon	150441329	150441331	100	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 2519 2521 -
Chr2	stalkie_big_nohaplotig	exon	150461804	150461805	100	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 2517 2518 -
Chr2	stalkie_big_nohaplotig	exon	150469260	150469261	100	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 2515 2516 -
Chr2	stalkie_big_nohaplotig	exon	150484462	150484465	100	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 2511 2514 -
Chr2	stalkie_big_nohaplotig	exon	150492448	150492452	100	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 2506 2510 -
Chr2	stalkie_big_nohaplotig	exon	150493926	150493932	100	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 2499 2505 -
Chr2	stalkie_big_nohaplotig	exon	150494472	150494479	100	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 2491 2498 -
Chr2	stalkie_big_nohaplotig	exon	150495981	150495984	100	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 2487 2490 -
Chr2	stalkie_big_nohaplotig	exon	150502366	150502374	100	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 2478 2486 -
Chr2	stalkie_big_nohaplotig	exon	150503384	150503392	77	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 2469 2477 -
Chr2	stalkie_big_nohaplotig	exon	150508178	150508181	100	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 2465 2468 -
Chr2	stalkie_big_nohaplotig	exon	150509836	150509843	100	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 2457 2464 -
Chr2	stalkie_big_nohaplotig	exon	150511485	150511488	100	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 2453 2456 -
Chr2	stalkie_big_nohaplotig	exon	150515948	150515949	100	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 2451 2452 -
Chr2	stalkie_big_nohaplotig	exon	152303483	152305925	98	+	.	Parent=comp156036_c0_seq1.mrna1;Target=comp156036_c0_seq1 1 2450 -
Chr2	stalkie_big_nohaplotig	CDS	152305190	152305483	.	+	0	Parent=comp156036_c0_seq1.mrna1
Chr2	gffcl	locus	150407320	150407849	.	-	.	ID=RLOC_00022690;geneIDs=comp150683_c0_seq1.path1;transcripts=comp150683_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150407320	150407849	.	-	.	ID=comp150683_c0_seq1.mrna1;geneID=comp150683_c0_seq1.path1;Name=comp150683_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=522;mismatches=8;indels=0;unknowns=0;Target=comp150683_c0_seq1 530 1 .;CDS_Target=comp150683_c0_seq1 67 2 .;locus=RLOC_00022690
Chr2	stalkie_big_nohaplotig	exon	150407320	150407849	98	-	.	Parent=comp150683_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	150407783	150407848	.	-	0	Parent=comp150683_c0_seq1.mrna1
Chr2	gffcl	locus	150410527	150414525	.	-	.	ID=RLOC_00022691;geneIDs=FBgn0263929.1.path1;transcripts=FBgn0263929.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150410527	150414525	.	-	.	ID=FBgn0263929.1.mrna1;geneID=FBgn0263929.1.path1;Name=FBgn0263929.1;Dir=sensecoverage=88.4;identity=100.0;matches=3240;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022691
Chr2	stalkie_big_nohaplotig	exon	150410527	150411428	100	-	.	Parent=FBgn0263929.1.mrna1;Target=FBgn0263929.1 2765 3666 +
Chr2	stalkie_big_nohaplotig	exon	150411820	150412366	100	-	.	Parent=FBgn0263929.1.mrna1;Target=FBgn0263929.1 2218 2764 +
Chr2	stalkie_big_nohaplotig	exon	150412432	150412530	100	-	.	Parent=FBgn0263929.1.mrna1;Target=FBgn0263929.1 2119 2217 +
Chr2	stalkie_big_nohaplotig	exon	150412616	150413024	100	-	.	Parent=FBgn0263929.1.mrna1;Target=FBgn0263929.1 1710 2118 +
Chr2	stalkie_big_nohaplotig	exon	150413104	150413618	100	-	.	Parent=FBgn0263929.1.mrna1;Target=FBgn0263929.1 1195 1709 +
Chr2	stalkie_big_nohaplotig	exon	150413683	150413971	100	-	.	Parent=FBgn0263929.1.mrna1;Target=FBgn0263929.1 906 1194 +
Chr2	stalkie_big_nohaplotig	exon	150414047	150414525	100	-	.	Parent=FBgn0263929.1.mrna1;Target=FBgn0263929.1 427 905 +
Chr2	stalkie_big_nohaplotig	CDS	150410527	150411428	.	-	2	Parent=FBgn0263929.1.mrna1;Target=FBgn0263929.1 2765 3666 +
Chr2	stalkie_big_nohaplotig	CDS	150411820	150412366	.	-	0	Parent=FBgn0263929.1.mrna1;Target=FBgn0263929.1 2218 2764 +
Chr2	stalkie_big_nohaplotig	CDS	150412432	150412530	.	-	0	Parent=FBgn0263929.1.mrna1;Target=FBgn0263929.1 2119 2217 +
Chr2	stalkie_big_nohaplotig	CDS	150412616	150413024	.	-	1	Parent=FBgn0263929.1.mrna1;Target=FBgn0263929.1 1710 2118 +
Chr2	stalkie_big_nohaplotig	CDS	150413104	150413618	.	-	0	Parent=FBgn0263929.1.mrna1;Target=FBgn0263929.1 1195 1709 +
Chr2	stalkie_big_nohaplotig	CDS	150413683	150413971	.	-	1	Parent=FBgn0263929.1.mrna1;Target=FBgn0263929.1 906 1194 +
Chr2	stalkie_big_nohaplotig	CDS	150414047	150414525	.	-	0	Parent=FBgn0263929.1.mrna1;Target=FBgn0263929.1 427 905 +
Chr2	gffcl	locus	150544308	150546736	.	+	.	ID=RLOC_00022693;geneIDs=FBgn0000576.1.path1;transcripts=FBgn0000576.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150544308	150546736	.	+	.	ID=FBgn0000576.1.mrna1;geneID=FBgn0000576.1.path1;Name=FBgn0000576.1;Dir=sensecoverage=100.0;identity=99.4;matches=1506;mismatches=9;indels=0;unknowns=0;locus=RLOC_00022693
Chr2	stalkie_big_nohaplotig	exon	150544308	150545472	99	+	.	Parent=FBgn0000576.1.mrna1;Target=FBgn0000576.1 1 1165 +
Chr2	stalkie_big_nohaplotig	exon	150546387	150546736	100	+	.	Parent=FBgn0000576.1.mrna1;Target=FBgn0000576.1 1166 1515 +
Chr2	stalkie_big_nohaplotig	CDS	150544308	150545472	.	+	0	Parent=FBgn0000576.1.mrna1;Target=FBgn0000576.1 1 1165 +
Chr2	stalkie_big_nohaplotig	CDS	150546387	150546736	.	+	2	Parent=FBgn0000576.1.mrna1;Target=FBgn0000576.1 1166 1515 +
Chr2	gffcl	locus	150636104	150636812	.	+	.	ID=RLOC_00022694;geneIDs=comp147054_c0_seq1.path2;transcripts=comp147054_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	150636104	150636812	.	+	.	ID=comp147054_c0_seq1.mrna2;geneID=comp147054_c0_seq1.path2;Name=comp147054_c0_seq1;Dir=indeterminatecoverage=97.5;identity=99.2;matches=704;mismatches=5;indels=1;unknowns=0;Target=comp147054_c0_seq1 728 19 .;CDS_Target=comp147054_c0_seq1 311 129 .;locus=RLOC_00022694
Chr2	stalkie_big_nohaplotig	exon	150636104	150636812	99	+	.	Parent=comp147054_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	150636213	150636395	.	+	0	Parent=comp147054_c0_seq1.mrna2
Chr2	gffcl	locus	150668082	150668925	.	+	.	ID=RLOC_00022695;geneIDs=comp137886_c0_seq1.path1;transcripts=comp137886_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150668082	150668925	.	+	.	ID=comp137886_c0_seq1.mrna1;geneID=comp137886_c0_seq1.path1;Name=comp137886_c0_seq1;Dir=indeterminatecoverage=98.4;identity=96.4;matches=814;mismatches=30;indels=0;unknowns=0;Target=comp137886_c0_seq1 846 3 .;CDS_Target=comp137886_c0_seq1 693 610 .;locus=RLOC_00022695
Chr2	stalkie_big_nohaplotig	exon	150668082	150668925	96	+	.	Parent=comp137886_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	150668689	150668772	.	+	0	Parent=comp137886_c0_seq1.mrna1
Chr2	gffcl	locus	150670116	151571399	.	+	.	ID=RLOC_00022696;geneIDs=comp145681_c0_seq1.path1;transcripts=comp145681_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150670116	151571399	.	+	.	ID=comp145681_c0_seq1.mrna1;geneID=comp145681_c0_seq1.path1;Name=comp145681_c0_seq1;Dir=indeterminatecoverage=81.3;identity=81.3;matches=370;mismatches=71;indels=14;unknowns=0;Target=comp145681_c0_seq1 48 1 .;locus=RLOC_00022696
Chr2	stalkie_big_nohaplotig	exon	150670116	150670415	79	+	.	Parent=comp145681_c0_seq1.mrna1;Target=comp145681_c0_seq1 300 1 .
Chr2	stalkie_big_nohaplotig	exon	151518747	151518750	100	+	.	Parent=comp145681_c0_seq1.mrna1;Target=comp145681_c0_seq1 304 301 .
Chr2	stalkie_big_nohaplotig	exon	151521449	151521455	100	+	.	Parent=comp145681_c0_seq1.mrna1;Target=comp145681_c0_seq1 311 305 .
Chr2	stalkie_big_nohaplotig	exon	151529238	151529239	100	+	.	Parent=comp145681_c0_seq1.mrna1;Target=comp145681_c0_seq1 313 312 .
Chr2	stalkie_big_nohaplotig	exon	151536308	151536313	100	+	.	Parent=comp145681_c0_seq1.mrna1;Target=comp145681_c0_seq1 319 314 .
Chr2	stalkie_big_nohaplotig	exon	151539701	151539708	100	+	.	Parent=comp145681_c0_seq1.mrna1;Target=comp145681_c0_seq1 327 320 .
Chr2	stalkie_big_nohaplotig	exon	151563157	151563266	80	+	.	Parent=comp145681_c0_seq1.mrna1;Target=comp145681_c0_seq1 437 328 .
Chr2	stalkie_big_nohaplotig	exon	151566616	151566623	100	+	.	Parent=comp145681_c0_seq1.mrna1;Target=comp145681_c0_seq1 449 442 .
Chr2	stalkie_big_nohaplotig	exon	151571397	151571399	100	+	.	Parent=comp145681_c0_seq1.mrna1;Target=comp145681_c0_seq1 452 450 .
Chr2	stalkie_big_nohaplotig	CDS	150670116	150670166	.	+	0	Parent=comp145681_c0_seq1.mrna1
Chr2	gffcl	locus	150678745	150679454	.	-	.	ID=RLOC_00022697;geneIDs=comp147054_c0_seq1.path1;transcripts=comp147054_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150678745	150679454	.	-	.	ID=comp147054_c0_seq1.mrna1;geneID=comp147054_c0_seq1.path1;Name=comp147054_c0_seq1;Dir=indeterminatecoverage=97.7;identity=99.2;matches=705;mismatches=5;indels=1;unknowns=0;Target=comp147054_c0_seq1 728 18 .;CDS_Target=comp147054_c0_seq1 311 129 .;locus=RLOC_00022697
Chr2	stalkie_big_nohaplotig	exon	150678745	150679454	99	-	.	Parent=comp147054_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	150679162	150679344	.	-	0	Parent=comp147054_c0_seq1.mrna1
Chr2	gffcl	locus	150722339	150722731	.	+	.	ID=RLOC_00022699;geneIDs=comp144076_c1_seq1.path1;transcripts=comp144076_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150722339	150722731	.	+	.	ID=comp144076_c1_seq1.mrna1;geneID=comp144076_c1_seq1.path1;Name=comp144076_c1_seq1;Dir=indeterminatecoverage=99.7;identity=93.6;matches=334;mismatches=6;indels=17;unknowns=0;Target=comp144076_c1_seq1 222 28 .;locus=RLOC_00022699
Chr2	stalkie_big_nohaplotig	exon	150722339	150722613	92	+	.	Parent=comp144076_c1_seq1.mrna1;Target=comp144076_c1_seq1 292 1 .
Chr2	stalkie_big_nohaplotig	exon	150722667	150722731	98	+	.	Parent=comp144076_c1_seq1.mrna1;Target=comp144076_c1_seq1 357 293 .
Chr2	stalkie_big_nohaplotig	CDS	150722366	150722543	.	+	0	Parent=comp144076_c1_seq1.mrna1
Chr2	gffcl	locus	150745974	150746600	.	-	.	ID=RLOC_00022700;geneIDs=comp160082_c0_seq1.path1;transcripts=comp160082_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150745974	150746600	.	-	.	ID=comp160082_c0_seq1.mrna1;geneID=comp160082_c0_seq1.path1;Name=comp160082_c0_seq1;Dir=indeterminatecoverage=99.9;identity=88.9;matches=546;mismatches=20;indels=48;unknowns=0;Target=comp160082_c0_seq1 384 280 .;locus=RLOC_00022700
Chr2	stalkie_big_nohaplotig	exon	150745974	150746458	88	-	.	Parent=comp160082_c0_seq1.mrna1;Target=comp160082_c0_seq1 785 257 .
Chr2	stalkie_big_nohaplotig	exon	150746519	150746574	90	-	.	Parent=comp160082_c0_seq1.mrna1;Target=comp160082_c0_seq1 224 165 .
Chr2	stalkie_big_nohaplotig	exon	150746576	150746600	100	-	.	Parent=comp160082_c0_seq1.mrna1;Target=comp160082_c0_seq1 25 1 .
Chr2	stalkie_big_nohaplotig	CDS	150746331	150746435	.	-	0	Parent=comp160082_c0_seq1.mrna1
Chr2	gffcl	locus	150747111	150747330	.	+	.	ID=RLOC_00022701;geneIDs=comp72416_c0_seq1.path1;transcripts=comp72416_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150747111	150747330	.	+	.	ID=comp72416_c0_seq1.mrna1;geneID=comp72416_c0_seq1.path1;Name=comp72416_c0_seq1;Dir=indeterminatecoverage=92.8;identity=99.1;matches=218;mismatches=2;indels=0;unknowns=0;Target=comp72416_c0_seq1 236 17 .;CDS_Target=comp72416_c0_seq1 209 141 .;locus=RLOC_00022701
Chr2	stalkie_big_nohaplotig	exon	150747111	150747330	99	+	.	Parent=comp72416_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	150747235	150747303	.	+	0	Parent=comp72416_c0_seq1.mrna1
Chr2	gffcl	locus	150747833	150750715	.	-	.	ID=RLOC_00022702;geneIDs=FBgn0039663.1.path1;transcripts=FBgn0039663.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150747833	150750715	.	-	.	ID=FBgn0039663.1.mrna1;geneID=FBgn0039663.1.path1;Name=FBgn0039663.1;Dir=sensecoverage=100.0;identity=99.7;matches=2384;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022702
Chr2	stalkie_big_nohaplotig	exon	150747833	150747958	98	-	.	Parent=FBgn0039663.1.mrna1;Target=FBgn0039663.1 2266 2391 +
Chr2	stalkie_big_nohaplotig	exon	150748036	150748194	100	-	.	Parent=FBgn0039663.1.mrna1;Target=FBgn0039663.1 2107 2265 +
Chr2	stalkie_big_nohaplotig	exon	150748489	150748650	98	-	.	Parent=FBgn0039663.1.mrna1;Target=FBgn0039663.1 1945 2106 +
Chr2	stalkie_big_nohaplotig	exon	150748719	150749633	100	-	.	Parent=FBgn0039663.1.mrna1;Target=FBgn0039663.1 1030 1944 +
Chr2	stalkie_big_nohaplotig	exon	150749687	150750715	99	-	.	Parent=FBgn0039663.1.mrna1;Target=FBgn0039663.1 1 1029 +
Chr2	stalkie_big_nohaplotig	CDS	150747833	150747958	.	-	0	Parent=FBgn0039663.1.mrna1;Target=FBgn0039663.1 2266 2391 +
Chr2	stalkie_big_nohaplotig	CDS	150748036	150748194	.	-	0	Parent=FBgn0039663.1.mrna1;Target=FBgn0039663.1 2107 2265 +
Chr2	stalkie_big_nohaplotig	CDS	150748489	150748650	.	-	0	Parent=FBgn0039663.1.mrna1;Target=FBgn0039663.1 1945 2106 +
Chr2	stalkie_big_nohaplotig	CDS	150748719	150749633	.	-	0	Parent=FBgn0039663.1.mrna1;Target=FBgn0039663.1 1030 1944 +
Chr2	stalkie_big_nohaplotig	CDS	150749687	150750715	.	-	0	Parent=FBgn0039663.1.mrna1;Target=FBgn0039663.1 1 1029 +
Chr2	gffcl	locus	150752371	150753095	.	+	.	ID=RLOC_00022703;geneIDs=comp151315_c0_seq1.path1;transcripts=comp151315_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150752371	150753095	.	+	.	ID=comp151315_c0_seq1.mrna1;geneID=comp151315_c0_seq1.path1;Name=comp151315_c0_seq1;Dir=antisensecoverage=71.5;identity=99.1;matches=665;mismatches=6;indels=0;unknowns=0;locus=RLOC_00022703
Chr2	stalkie_big_nohaplotig	exon	150752371	150752504	100	+	.	Parent=comp151315_c0_seq1.mrna1;Target=comp151315_c0_seq1 806 939 -
Chr2	stalkie_big_nohaplotig	exon	150752559	150753095	98	+	.	Parent=comp151315_c0_seq1.mrna1;Target=comp151315_c0_seq1 269 805 -
Chr2	stalkie_big_nohaplotig	CDS	150752373	150752504	.	+	0	Parent=comp151315_c0_seq1.mrna1;Target=comp151315_c0_seq1 806 937 .
Chr2	stalkie_big_nohaplotig	CDS	150752559	150753029	.	+	0	Parent=comp151315_c0_seq1.mrna1;Target=comp151315_c0_seq1 335 805 .
Chr2	gffcl	locus	150753102	150756019	.	-	.	ID=RLOC_00022704;geneIDs=FBgn0260779.1.path1;transcripts=FBgn0260779.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150753102	150756019	.	-	.	ID=FBgn0260779.1.mrna1;geneID=FBgn0260779.1.path1;Name=FBgn0260779.1;Dir=sensecoverage=100.0;identity=99.4;matches=1541;mismatches=10;indels=0;unknowns=0;locus=RLOC_00022704
Chr2	stalkie_big_nohaplotig	exon	150753102	150754101	99	-	.	Parent=FBgn0260779.1.mrna1;Target=FBgn0260779.1 552 1551 +
Chr2	stalkie_big_nohaplotig	exon	150755349	150755591	100	-	.	Parent=FBgn0260779.1.mrna1;Target=FBgn0260779.1 309 551 +
Chr2	stalkie_big_nohaplotig	exon	150755654	150755901	98	-	.	Parent=FBgn0260779.1.mrna1;Target=FBgn0260779.1 61 308 +
Chr2	stalkie_big_nohaplotig	exon	150755960	150756019	98	-	.	Parent=FBgn0260779.1.mrna1;Target=FBgn0260779.1 1 60 +
Chr2	stalkie_big_nohaplotig	CDS	150753102	150754101	.	-	1	Parent=FBgn0260779.1.mrna1;Target=FBgn0260779.1 552 1551 +
Chr2	stalkie_big_nohaplotig	CDS	150755349	150755591	.	-	1	Parent=FBgn0260779.1.mrna1;Target=FBgn0260779.1 309 551 +
Chr2	stalkie_big_nohaplotig	CDS	150755654	150755901	.	-	0	Parent=FBgn0260779.1.mrna1;Target=FBgn0260779.1 61 308 +
Chr2	stalkie_big_nohaplotig	CDS	150755960	150756019	.	-	0	Parent=FBgn0260779.1.mrna1;Target=FBgn0260779.1 1 60 +
Chr2	gffcl	locus	150754628	150755086	.	+	.	ID=RLOC_00022705;geneIDs=FBgn0027785.1.path1;transcripts=FBgn0027785.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150754628	150755086	.	+	.	ID=FBgn0027785.1.mrna1;geneID=FBgn0027785.1.path1;Name=FBgn0027785.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=458;mismatches=1;indels=0;unknowns=0;Target=FBgn0027785.1 459 1 .;locus=RLOC_00022705
Chr2	stalkie_big_nohaplotig	exon	150754628	150755086	99	+	.	Parent=FBgn0027785.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	150754628	150755086	.	+	0	Parent=FBgn0027785.1.mrna1
Chr2	gffcl	locus	150757985	150761134	.	+	.	ID=RLOC_00022706;geneIDs=FBgn0039696.1.path1;transcripts=FBgn0039696.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150757985	150761134	.	+	.	ID=FBgn0039696.1.mrna1;geneID=FBgn0039696.1.path1;Name=FBgn0039696.1;Dir=sensecoverage=100.0;identity=99.4;matches=2018;mismatches=13;indels=0;unknowns=0;locus=RLOC_00022706
Chr2	stalkie_big_nohaplotig	exon	150757985	150758092	100	+	.	Parent=FBgn0039696.1.mrna1;Target=FBgn0039696.1 1 108 +
Chr2	stalkie_big_nohaplotig	exon	150758265	150758408	100	+	.	Parent=FBgn0039696.1.mrna1;Target=FBgn0039696.1 109 252 +
Chr2	stalkie_big_nohaplotig	exon	150758464	150759033	99	+	.	Parent=FBgn0039696.1.mrna1;Target=FBgn0039696.1 253 822 +
Chr2	stalkie_big_nohaplotig	exon	150759095	150759433	99	+	.	Parent=FBgn0039696.1.mrna1;Target=FBgn0039696.1 823 1161 +
Chr2	stalkie_big_nohaplotig	exon	150759494	150759700	97	+	.	Parent=FBgn0039696.1.mrna1;Target=FBgn0039696.1 1162 1368 +
Chr2	stalkie_big_nohaplotig	exon	150759888	150760020	100	+	.	Parent=FBgn0039696.1.mrna1;Target=FBgn0039696.1 1369 1501 +
Chr2	stalkie_big_nohaplotig	exon	150760077	150760298	99	+	.	Parent=FBgn0039696.1.mrna1;Target=FBgn0039696.1 1502 1723 +
Chr2	stalkie_big_nohaplotig	exon	150760361	150760565	99	+	.	Parent=FBgn0039696.1.mrna1;Target=FBgn0039696.1 1724 1928 +
Chr2	stalkie_big_nohaplotig	exon	150760971	150761046	100	+	.	Parent=FBgn0039696.1.mrna1;Target=FBgn0039696.1 1929 2004 +
Chr2	stalkie_big_nohaplotig	exon	150761108	150761134	100	+	.	Parent=FBgn0039696.1.mrna1;Target=FBgn0039696.1 2005 2031 +
Chr2	stalkie_big_nohaplotig	CDS	150757985	150758092	.	+	0	Parent=FBgn0039696.1.mrna1;Target=FBgn0039696.1 1 108 +
Chr2	stalkie_big_nohaplotig	CDS	150758265	150758408	.	+	0	Parent=FBgn0039696.1.mrna1;Target=FBgn0039696.1 109 252 +
Chr2	stalkie_big_nohaplotig	CDS	150758464	150759033	.	+	0	Parent=FBgn0039696.1.mrna1;Target=FBgn0039696.1 253 822 +
Chr2	stalkie_big_nohaplotig	CDS	150759095	150759433	.	+	0	Parent=FBgn0039696.1.mrna1;Target=FBgn0039696.1 823 1161 +
Chr2	stalkie_big_nohaplotig	CDS	150759494	150759700	.	+	0	Parent=FBgn0039696.1.mrna1;Target=FBgn0039696.1 1162 1368 +
Chr2	stalkie_big_nohaplotig	CDS	150759888	150760020	.	+	0	Parent=FBgn0039696.1.mrna1;Target=FBgn0039696.1 1369 1501 +
Chr2	stalkie_big_nohaplotig	CDS	150760077	150760298	.	+	2	Parent=FBgn0039696.1.mrna1;Target=FBgn0039696.1 1502 1723 +
Chr2	stalkie_big_nohaplotig	CDS	150760361	150760565	.	+	2	Parent=FBgn0039696.1.mrna1;Target=FBgn0039696.1 1724 1928 +
Chr2	stalkie_big_nohaplotig	CDS	150760971	150761046	.	+	1	Parent=FBgn0039696.1.mrna1;Target=FBgn0039696.1 1929 2004 +
Chr2	stalkie_big_nohaplotig	CDS	150761108	150761134	.	+	0	Parent=FBgn0039696.1.mrna1;Target=FBgn0039696.1 2005 2031 +
Chr2	gffcl	locus	150765689	150768695	.	-	.	ID=RLOC_00022707;geneIDs=FBgn0015795.1.path1;transcripts=FBgn0015795.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150765689	150768695	.	-	.	ID=FBgn0015795.1.mrna1;geneID=FBgn0015795.1.path1;Name=FBgn0015795.1;Dir=sensecoverage=100.0;identity=99.8;matches=626;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022707
Chr2	stalkie_big_nohaplotig	exon	150765689	150765775	100	-	.	Parent=FBgn0015795.1.mrna1;Target=FBgn0015795.1 541 627 +
Chr2	stalkie_big_nohaplotig	exon	150765846	150765983	100	-	.	Parent=FBgn0015795.1.mrna1;Target=FBgn0015795.1 403 540 +
Chr2	stalkie_big_nohaplotig	exon	150768227	150768445	100	-	.	Parent=FBgn0015795.1.mrna1;Target=FBgn0015795.1 184 402 +
Chr2	stalkie_big_nohaplotig	exon	150768513	150768695	99	-	.	Parent=FBgn0015795.1.mrna1;Target=FBgn0015795.1 1 183 +
Chr2	stalkie_big_nohaplotig	CDS	150765689	150765775	.	-	0	Parent=FBgn0015795.1.mrna1;Target=FBgn0015795.1 541 627 +
Chr2	stalkie_big_nohaplotig	CDS	150765846	150765983	.	-	0	Parent=FBgn0015795.1.mrna1;Target=FBgn0015795.1 403 540 +
Chr2	stalkie_big_nohaplotig	CDS	150768227	150768445	.	-	0	Parent=FBgn0015795.1.mrna1;Target=FBgn0015795.1 184 402 +
Chr2	stalkie_big_nohaplotig	CDS	150768513	150768695	.	-	0	Parent=FBgn0015795.1.mrna1;Target=FBgn0015795.1 1 183 +
Chr2	gffcl	locus	150766105	150766568	.	-	.	ID=RLOC_00022708;geneIDs=comp150262_c0_seq1.path1;transcripts=comp150262_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150766105	150766568	.	-	.	ID=comp150262_c0_seq1.mrna1;geneID=comp150262_c0_seq1.path1;Name=comp150262_c0_seq1;Dir=indeterminatecoverage=98.7;identity=91.6;matches=428;mismatches=32;indels=7;unknowns=0;Target=comp150262_c0_seq1 465 3 .;CDS_Target=comp150262_c0_seq1 60 4 .;locus=RLOC_00022708
Chr2	stalkie_big_nohaplotig	exon	150766105	150766568	91	-	.	Parent=comp150262_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	150766511	150766567	.	-	0	Parent=comp150262_c0_seq1.mrna1
Chr2	gffcl	locus	150824193	150824257	.	+	.	ID=RLOC_00022709;geneIDs=comp156477_c1_seq1.path1;transcripts=comp156477_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150824193	150824257	.	+	.	ID=comp156477_c1_seq1.mrna1;geneID=comp156477_c1_seq1.path1;Name=comp156477_c1_seq1;Dir=indeterminatecoverage=3.7;identity=100.0;matches=65;mismatches=0;indels=0;unknowns=0;Target=comp156477_c1_seq1 65 1 .;locus=RLOC_00022709
Chr2	stalkie_big_nohaplotig	exon	150824193	150824257	100	+	.	Parent=comp156477_c1_seq1.mrna1
Chr2	gffcl	locus	150911998	150914367	.	+	.	ID=RLOC_00022710;geneIDs=FBgn0024314.2.path1;transcripts=FBgn0024314.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	150911998	150914367	.	+	.	ID=FBgn0024314.2.mrna1;geneID=FBgn0024314.2.path1;Name=FBgn0024314.2;Dir=indeterminatecoverage=100.0;identity=99.3;matches=2353;mismatches=17;indels=0;unknowns=0;Target=FBgn0024314.2 2370 1 .;locus=RLOC_00022710
Chr2	stalkie_big_nohaplotig	exon	150911998	150914367	99	+	.	Parent=FBgn0024314.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	150911998	150914367	.	+	0	Parent=FBgn0024314.2.mrna1
Chr2	gffcl	locus	151050738	151051534	.	+	.	ID=RLOC_00022712;geneIDs=comp163475_c0_seq1.path5;transcripts=comp163475_c0_seq1.mrna5
Chr2	stalkie_big_nohaplotig	mRNA	151050738	151051534	.	+	.	ID=comp163475_c0_seq1.mrna5;geneID=comp163475_c0_seq1.path5;Name=comp163475_c0_seq1;Dir=indeterminatecoverage=62.5;identity=98.0;matches=781;mismatches=13;indels=3;unknowns=0;Target=comp163475_c0_seq1 795 2 .;CDS_Target=comp163475_c0_seq1 330 109 .;locus=RLOC_00022712
Chr2	stalkie_big_nohaplotig	exon	151050738	151051534	97	+	.	Parent=comp163475_c0_seq1.mrna5
Chr2	stalkie_big_nohaplotig	CDS	151050845	151051066	.	+	0	Parent=comp163475_c0_seq1.mrna5
Chr2	gffcl	locus	151072600	152984826	.	.	.	ID=RLOC_00022713;geneIDs=comp80095_c0_seq1.path1,comp100510_c0_seq1.path1;transcripts=comp100510_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151072600	152984627	.	-	.	ID=comp100510_c0_seq1.mrna1;geneID=comp100510_c0_seq1.path1;Name=comp100510_c0_seq1;Dir=indeterminatecoverage=45.8;identity=91.8;matches=178;mismatches=9;indels=7;unknowns=0;Target=comp100510_c0_seq1 229 173 .;locus=RLOC_00022713
Chr2	stalkie_big_nohaplotig	exon	151072600	151072606	100	-	.	Parent=comp100510_c0_seq1.mrna1;Target=comp100510_c0_seq1 361 355 .
Chr2	stalkie_big_nohaplotig	exon	151100621	151100628	100	-	.	Parent=comp100510_c0_seq1.mrna1;Target=comp100510_c0_seq1 354 347 .
Chr2	stalkie_big_nohaplotig	exon	152984454	152984627	91	-	.	Parent=comp100510_c0_seq1.mrna1;Target=comp100510_c0_seq1 345 171 .
Chr2	stalkie_big_nohaplotig	CDS	152984566	152984625	.	-	0	Parent=comp100510_c0_seq1.mrna1
Chr2	gffcl	locus	151079174	151079909	.	.	.	ID=RLOC_00022714;geneIDs=comp149452_c0_seq1.path1,comp149672_c0_seq1.path1;transcripts=comp149452_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151079486	151079909	.	+	.	ID=comp149452_c0_seq1.mrna1;geneID=comp149452_c0_seq1.path1;Name=comp149452_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.3;matches=410;mismatches=14;indels=6;unknowns=0;Target=comp149452_c0_seq1 430 1 .;CDS_Target=comp149452_c0_seq1 120 1 .;locus=RLOC_00022714
Chr2	stalkie_big_nohaplotig	exon	151079486	151079909	95	+	.	Parent=comp149452_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	151079486	151079605	.	+	0	Parent=comp149452_c0_seq1.mrna1
Chr2	gffcl	locus	151082759	151083002	.	+	.	ID=RLOC_00022715;geneIDs=comp68137_c0_seq1.path1;transcripts=comp68137_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151082759	151083002	.	+	.	ID=comp68137_c0_seq1.mrna1;geneID=comp68137_c0_seq1.path1;Name=comp68137_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=244;mismatches=0;indels=0;unknowns=0;Target=comp68137_c0_seq1 244 1 .;CDS_Target=comp68137_c0_seq1 107 3 .;locus=RLOC_00022715
Chr2	stalkie_big_nohaplotig	exon	151082759	151083002	100	+	.	Parent=comp68137_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	151082761	151082865	.	+	0	Parent=comp68137_c0_seq1.mrna1
Chr2	gffcl	locus	151128849	151131287	.	-	.	ID=RLOC_00022716;geneIDs=FBgn0038606.1.path1;transcripts=FBgn0038606.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151128849	151131287	.	-	.	ID=FBgn0038606.1.mrna1;geneID=FBgn0038606.1.path1;Name=FBgn0038606.1;Dir=sensecoverage=100.0;identity=99.7;matches=2381;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022716
Chr2	stalkie_big_nohaplotig	exon	151128849	151129624	99	-	.	Parent=FBgn0038606.1.mrna1;Target=FBgn0038606.1 1613 2388 +
Chr2	stalkie_big_nohaplotig	exon	151129676	151131287	99	-	.	Parent=FBgn0038606.1.mrna1;Target=FBgn0038606.1 1 1612 +
Chr2	stalkie_big_nohaplotig	CDS	151128849	151129624	.	-	2	Parent=FBgn0038606.1.mrna1;Target=FBgn0038606.1 1613 2388 +
Chr2	stalkie_big_nohaplotig	CDS	151129676	151131287	.	-	0	Parent=FBgn0038606.1.mrna1;Target=FBgn0038606.1 1 1612 +
Chr2	gffcl	locus	151149455	151175187	.	+	.	ID=RLOC_00022717;geneIDs=FBgn0051235.1.path1;transcripts=FBgn0051235.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151149455	151175187	.	+	.	ID=FBgn0051235.1.mrna1;geneID=FBgn0051235.1.path1;Name=FBgn0051235.1;Dir=sensecoverage=100.0;identity=99.6;matches=1118;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022717
Chr2	stalkie_big_nohaplotig	exon	151149455	151149591	100	+	.	Parent=FBgn0051235.1.mrna1;Target=FBgn0051235.1 1 137 +
Chr2	stalkie_big_nohaplotig	exon	151153347	151153969	99	+	.	Parent=FBgn0051235.1.mrna1;Target=FBgn0051235.1 138 760 +
Chr2	stalkie_big_nohaplotig	exon	151154506	151154569	100	+	.	Parent=FBgn0051235.1.mrna1;Target=FBgn0051235.1 761 824 +
Chr2	stalkie_big_nohaplotig	exon	151174712	151174858	99	+	.	Parent=FBgn0051235.1.mrna1;Target=FBgn0051235.1 825 971 +
Chr2	stalkie_big_nohaplotig	exon	151175037	151175187	100	+	.	Parent=FBgn0051235.1.mrna1;Target=FBgn0051235.1 972 1122 +
Chr2	stalkie_big_nohaplotig	CDS	151149455	151149591	.	+	0	Parent=FBgn0051235.1.mrna1;Target=FBgn0051235.1 1 137 +
Chr2	stalkie_big_nohaplotig	CDS	151153347	151153969	.	+	1	Parent=FBgn0051235.1.mrna1;Target=FBgn0051235.1 138 760 +
Chr2	stalkie_big_nohaplotig	CDS	151154506	151154569	.	+	2	Parent=FBgn0051235.1.mrna1;Target=FBgn0051235.1 761 824 +
Chr2	stalkie_big_nohaplotig	CDS	151174712	151174858	.	+	1	Parent=FBgn0051235.1.mrna1;Target=FBgn0051235.1 825 971 +
Chr2	stalkie_big_nohaplotig	CDS	151175037	151175187	.	+	1	Parent=FBgn0051235.1.mrna1;Target=FBgn0051235.1 972 1122 +
Chr2	gffcl	locus	151152355	151153289	.	-	.	ID=RLOC_00022718;geneIDs=comp84021_c0_seq1.path1;transcripts=comp84021_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151152355	151153289	.	-	.	ID=comp84021_c0_seq1.mrna1;geneID=comp84021_c0_seq1.path1;Name=comp84021_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.1;matches=928;mismatches=7;indels=1;unknowns=0;Target=comp84021_c0_seq1 946 11 .;CDS_Target=comp84021_c0_seq1 626 456 .;locus=RLOC_00022718
Chr2	stalkie_big_nohaplotig	exon	151152355	151153289	99	-	.	Parent=comp84021_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	151152674	151152844	.	-	0	Parent=comp84021_c0_seq1.mrna1
Chr2	gffcl	locus	151156119	151156362	.	+	.	ID=RLOC_00022719;geneIDs=comp146211_c0_seq1.path1;transcripts=comp146211_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151156119	151156362	.	+	.	ID=comp146211_c0_seq1.mrna1;geneID=comp146211_c0_seq1.path1;Name=comp146211_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.9;matches=232;mismatches=12;indels=3;unknowns=0;Target=comp146211_c0_seq1 247 1 .;CDS_Target=comp146211_c0_seq1 148 53 .;locus=RLOC_00022719
Chr2	stalkie_big_nohaplotig	exon	151156119	151156362	93	+	.	Parent=comp146211_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	151156171	151156266	.	+	0	Parent=comp146211_c0_seq1.mrna1
Chr2	gffcl	locus	151159159	151159827	.	-	.	ID=RLOC_00022720;geneIDs=comp151461_c1_seq1.path1;transcripts=comp151461_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151159159	151159827	.	-	.	ID=comp151461_c1_seq1.mrna1;geneID=comp151461_c1_seq1.path1;Name=comp151461_c1_seq1;Dir=antisensecoverage=95.1;identity=96.5;matches=466;mismatches=17;indels=0;unknowns=0;locus=RLOC_00022720
Chr2	stalkie_big_nohaplotig	exon	151159159	151159508	97	-	.	Parent=comp151461_c1_seq1.mrna1;Target=comp151461_c1_seq1 26 375 -
Chr2	stalkie_big_nohaplotig	exon	151159643	151159675	96	-	.	Parent=comp151461_c1_seq1.mrna1;Target=comp151461_c1_seq1 376 408 -
Chr2	stalkie_big_nohaplotig	exon	151159728	151159827	93	-	.	Parent=comp151461_c1_seq1.mrna1;Target=comp151461_c1_seq1 409 508 -
Chr2	stalkie_big_nohaplotig	CDS	151159218	151159508	.	-	0	Parent=comp151461_c1_seq1.mrna1;Target=comp151461_c1_seq1 85 375 .
Chr2	stalkie_big_nohaplotig	CDS	151159643	151159675	.	-	0	Parent=comp151461_c1_seq1.mrna1;Target=comp151461_c1_seq1 376 408 .
Chr2	stalkie_big_nohaplotig	CDS	151159728	151159757	.	-	0	Parent=comp151461_c1_seq1.mrna1;Target=comp151461_c1_seq1 409 438 .
Chr2	gffcl	locus	151160280	151161103	.	-	.	ID=RLOC_00022721;geneIDs=comp156441_c0_seq1.path1;transcripts=comp156441_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151160280	151161103	.	-	.	ID=comp156441_c0_seq1.mrna1;geneID=comp156441_c0_seq1.path1;Name=comp156441_c0_seq1;Dir=antisensecoverage=98.1;identity=98.5;matches=679;mismatches=9;indels=1;unknowns=0;locus=RLOC_00022721
Chr2	stalkie_big_nohaplotig	exon	151160280	151160777	98	-	.	Parent=comp156441_c0_seq1.mrna1;Target=comp156441_c0_seq1 14 512 -
Chr2	stalkie_big_nohaplotig	exon	151160837	151160949	100	-	.	Parent=comp156441_c0_seq1.mrna1;Target=comp156441_c0_seq1 513 625 -
Chr2	stalkie_big_nohaplotig	exon	151161027	151161103	93	-	.	Parent=comp156441_c0_seq1.mrna1;Target=comp156441_c0_seq1 626 702 -
Chr2	stalkie_big_nohaplotig	CDS	151160468	151160777	.	-	1	Parent=comp156441_c0_seq1.mrna1;Target=comp156441_c0_seq1 203 512 .
Chr2	stalkie_big_nohaplotig	CDS	151160837	151160949	.	-	0	Parent=comp156441_c0_seq1.mrna1;Target=comp156441_c0_seq1 513 625 .
Chr2	stalkie_big_nohaplotig	CDS	151161027	151161056	.	-	0	Parent=comp156441_c0_seq1.mrna1;Target=comp156441_c0_seq1 626 655 .
Chr2	gffcl	locus	151228764	151230138	.	+	.	ID=RLOC_00022723;geneIDs=FBgn0038601.1.path1;transcripts=FBgn0038601.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151228764	151230138	.	+	.	ID=FBgn0038601.1.mrna1;geneID=FBgn0038601.1.path1;Name=FBgn0038601.1;Dir=sensecoverage=100.0;identity=99.6;matches=1136;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022723
Chr2	stalkie_big_nohaplotig	exon	151228764	151228836	100	+	.	Parent=FBgn0038601.1.mrna1;Target=FBgn0038601.1 1 73 +
Chr2	stalkie_big_nohaplotig	exon	151228898	151229082	100	+	.	Parent=FBgn0038601.1.mrna1;Target=FBgn0038601.1 74 258 +
Chr2	stalkie_big_nohaplotig	exon	151229135	151229553	99	+	.	Parent=FBgn0038601.1.mrna1;Target=FBgn0038601.1 259 677 +
Chr2	stalkie_big_nohaplotig	exon	151229616	151229837	99	+	.	Parent=FBgn0038601.1.mrna1;Target=FBgn0038601.1 678 899 +
Chr2	stalkie_big_nohaplotig	exon	151229898	151230138	99	+	.	Parent=FBgn0038601.1.mrna1;Target=FBgn0038601.1 900 1140 +
Chr2	stalkie_big_nohaplotig	CDS	151228764	151228836	.	+	0	Parent=FBgn0038601.1.mrna1;Target=FBgn0038601.1 1 73 +
Chr2	stalkie_big_nohaplotig	CDS	151228898	151229082	.	+	2	Parent=FBgn0038601.1.mrna1;Target=FBgn0038601.1 74 258 +
Chr2	stalkie_big_nohaplotig	CDS	151229135	151229553	.	+	0	Parent=FBgn0038601.1.mrna1;Target=FBgn0038601.1 259 677 +
Chr2	stalkie_big_nohaplotig	CDS	151229616	151229837	.	+	1	Parent=FBgn0038601.1.mrna1;Target=FBgn0038601.1 678 899 +
Chr2	stalkie_big_nohaplotig	CDS	151229898	151230138	.	+	1	Parent=FBgn0038601.1.mrna1;Target=FBgn0038601.1 900 1140 +
Chr2	gffcl	locus	151231425	151231847	.	-	.	ID=RLOC_00022724;geneIDs=FBgn0024432.2.path1;transcripts=FBgn0024432.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151231425	151231847	.	-	.	ID=FBgn0024432.2.mrna1;geneID=FBgn0024432.2.path1;Name=FBgn0024432.2;Dir=sensecoverage=100.0;identity=99.2;matches=357;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022724
Chr2	stalkie_big_nohaplotig	exon	151231425	151231764	99	-	.	Parent=FBgn0024432.2.mrna1;Target=FBgn0024432.2 21 360 +
Chr2	stalkie_big_nohaplotig	exon	151231828	151231847	95	-	.	Parent=FBgn0024432.2.mrna1;Target=FBgn0024432.2 1 20 +
Chr2	stalkie_big_nohaplotig	CDS	151231425	151231764	.	-	1	Parent=FBgn0024432.2.mrna1;Target=FBgn0024432.2 21 360 +
Chr2	stalkie_big_nohaplotig	CDS	151231828	151231847	.	-	0	Parent=FBgn0024432.2.mrna1;Target=FBgn0024432.2 1 20 +
Chr2	gffcl	locus	151232840	151234695	.	+	.	ID=RLOC_00022725;geneIDs=FBgn0038272.1.path1;transcripts=FBgn0038272.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151232840	151234695	.	+	.	ID=FBgn0038272.1.mrna1;geneID=FBgn0038272.1.path1;Name=FBgn0038272.1;Dir=sensecoverage=100.0;identity=98.9;matches=1407;mismatches=15;indels=0;unknowns=0;locus=RLOC_00022725
Chr2	stalkie_big_nohaplotig	exon	151232840	151232998	96	+	.	Parent=FBgn0038272.1.mrna1;Target=FBgn0038272.1 1 159 +
Chr2	stalkie_big_nohaplotig	exon	151233056	151233187	100	+	.	Parent=FBgn0038272.1.mrna1;Target=FBgn0038272.1 160 291 +
Chr2	stalkie_big_nohaplotig	exon	151233293	151233536	97	+	.	Parent=FBgn0038272.1.mrna1;Target=FBgn0038272.1 292 535 +
Chr2	stalkie_big_nohaplotig	exon	151233599	151233754	100	+	.	Parent=FBgn0038272.1.mrna1;Target=FBgn0038272.1 536 691 +
Chr2	stalkie_big_nohaplotig	exon	151233965	151234695	99	+	.	Parent=FBgn0038272.1.mrna1;Target=FBgn0038272.1 692 1422 +
Chr2	stalkie_big_nohaplotig	CDS	151232840	151232998	.	+	0	Parent=FBgn0038272.1.mrna1;Target=FBgn0038272.1 1 159 +
Chr2	stalkie_big_nohaplotig	CDS	151233056	151233187	.	+	0	Parent=FBgn0038272.1.mrna1;Target=FBgn0038272.1 160 291 +
Chr2	stalkie_big_nohaplotig	CDS	151233293	151233536	.	+	0	Parent=FBgn0038272.1.mrna1;Target=FBgn0038272.1 292 535 +
Chr2	stalkie_big_nohaplotig	CDS	151233599	151233754	.	+	2	Parent=FBgn0038272.1.mrna1;Target=FBgn0038272.1 536 691 +
Chr2	stalkie_big_nohaplotig	CDS	151233965	151234695	.	+	2	Parent=FBgn0038272.1.mrna1;Target=FBgn0038272.1 692 1422 +
Chr2	gffcl	locus	151234935	151236926	.	-	.	ID=RLOC_00022726;geneIDs=FBgn0038271.1.path1;transcripts=FBgn0038271.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151234935	151236926	.	-	.	ID=FBgn0038271.1.mrna1;geneID=FBgn0038271.1.path1;Name=FBgn0038271.1;Dir=sensecoverage=100.0;identity=99.9;matches=1432;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022726
Chr2	stalkie_big_nohaplotig	exon	151234935	151235276	100	-	.	Parent=FBgn0038271.1.mrna1;Target=FBgn0038271.1 1093 1434 +
Chr2	stalkie_big_nohaplotig	exon	151235332	151235423	100	-	.	Parent=FBgn0038271.1.mrna1;Target=FBgn0038271.1 1001 1092 +
Chr2	stalkie_big_nohaplotig	exon	151235518	151235894	99	-	.	Parent=FBgn0038271.1.mrna1;Target=FBgn0038271.1 624 1000 +
Chr2	stalkie_big_nohaplotig	exon	151235953	151236281	99	-	.	Parent=FBgn0038271.1.mrna1;Target=FBgn0038271.1 295 623 +
Chr2	stalkie_big_nohaplotig	exon	151236340	151236549	100	-	.	Parent=FBgn0038271.1.mrna1;Target=FBgn0038271.1 85 294 +
Chr2	stalkie_big_nohaplotig	exon	151236843	151236926	100	-	.	Parent=FBgn0038271.1.mrna1;Target=FBgn0038271.1 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	151234935	151235276	.	-	0	Parent=FBgn0038271.1.mrna1;Target=FBgn0038271.1 1093 1434 +
Chr2	stalkie_big_nohaplotig	CDS	151235332	151235423	.	-	2	Parent=FBgn0038271.1.mrna1;Target=FBgn0038271.1 1001 1092 +
Chr2	stalkie_big_nohaplotig	CDS	151235518	151235894	.	-	1	Parent=FBgn0038271.1.mrna1;Target=FBgn0038271.1 624 1000 +
Chr2	stalkie_big_nohaplotig	CDS	151235953	151236281	.	-	0	Parent=FBgn0038271.1.mrna1;Target=FBgn0038271.1 295 623 +
Chr2	stalkie_big_nohaplotig	CDS	151236340	151236549	.	-	0	Parent=FBgn0038271.1.mrna1;Target=FBgn0038271.1 85 294 +
Chr2	stalkie_big_nohaplotig	CDS	151236843	151236926	.	-	0	Parent=FBgn0038271.1.mrna1;Target=FBgn0038271.1 1 84 +
Chr2	gffcl	locus	151238352	151239541	.	+	.	ID=RLOC_00022727;geneIDs=FBgn0039726.1.path2;transcripts=FBgn0039726.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	151238352	151239541	.	+	.	ID=FBgn0039726.1.mrna2;geneID=FBgn0039726.1.path2;Name=FBgn0039726.1;Dir=sensecoverage=100.0;identity=99.7;matches=930;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022727
Chr2	stalkie_big_nohaplotig	exon	151238352	151238400	100	+	.	Parent=FBgn0039726.1.mrna2;Target=FBgn0039726.1 1 49 +
Chr2	stalkie_big_nohaplotig	exon	151238473	151238574	100	+	.	Parent=FBgn0039726.1.mrna2;Target=FBgn0039726.1 50 151 +
Chr2	stalkie_big_nohaplotig	exon	151238628	151238994	99	+	.	Parent=FBgn0039726.1.mrna2;Target=FBgn0039726.1 152 518 +
Chr2	stalkie_big_nohaplotig	exon	151239064	151239334	100	+	.	Parent=FBgn0039726.1.mrna2;Target=FBgn0039726.1 519 789 +
Chr2	stalkie_big_nohaplotig	exon	151239398	151239541	98	+	.	Parent=FBgn0039726.1.mrna2;Target=FBgn0039726.1 790 933 +
Chr2	stalkie_big_nohaplotig	CDS	151238352	151238400	.	+	0	Parent=FBgn0039726.1.mrna2;Target=FBgn0039726.1 1 49 +
Chr2	stalkie_big_nohaplotig	CDS	151238473	151238574	.	+	2	Parent=FBgn0039726.1.mrna2;Target=FBgn0039726.1 50 151 +
Chr2	stalkie_big_nohaplotig	CDS	151238628	151238994	.	+	2	Parent=FBgn0039726.1.mrna2;Target=FBgn0039726.1 152 518 +
Chr2	stalkie_big_nohaplotig	CDS	151239064	151239334	.	+	1	Parent=FBgn0039726.1.mrna2;Target=FBgn0039726.1 519 789 +
Chr2	stalkie_big_nohaplotig	CDS	151239398	151239541	.	+	0	Parent=FBgn0039726.1.mrna2;Target=FBgn0039726.1 790 933 +
Chr2	gffcl	locus	151242342	151243236	.	+	.	ID=RLOC_00022728;geneIDs=FBgn0037815.1.path1;transcripts=FBgn0037815.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151242342	151243236	.	+	.	ID=FBgn0037815.1.mrna1;geneID=FBgn0037815.1.path1;Name=FBgn0037815.1;Dir=sensecoverage=100.0;identity=99.1;matches=770;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022728
Chr2	stalkie_big_nohaplotig	exon	151242342	151242471	100	+	.	Parent=FBgn0037815.1.mrna1;Target=FBgn0037815.1 1 130 +
Chr2	stalkie_big_nohaplotig	exon	151242538	151242773	99	+	.	Parent=FBgn0037815.1.mrna1;Target=FBgn0037815.1 131 366 +
Chr2	stalkie_big_nohaplotig	exon	151242826	151243236	98	+	.	Parent=FBgn0037815.1.mrna1;Target=FBgn0037815.1 367 777 +
Chr2	stalkie_big_nohaplotig	CDS	151242342	151242471	.	+	0	Parent=FBgn0037815.1.mrna1;Target=FBgn0037815.1 1 130 +
Chr2	stalkie_big_nohaplotig	CDS	151242538	151242773	.	+	2	Parent=FBgn0037815.1.mrna1;Target=FBgn0037815.1 131 366 +
Chr2	stalkie_big_nohaplotig	CDS	151242826	151243236	.	+	0	Parent=FBgn0037815.1.mrna1;Target=FBgn0037815.1 367 777 +
Chr2	gffcl	locus	151296647	151297472	.	-	.	ID=RLOC_00022729;geneIDs=comp158021_c0_seq1.path1;transcripts=comp158021_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151296647	151297472	.	-	.	ID=comp158021_c0_seq1.mrna1;geneID=comp158021_c0_seq1.path1;Name=comp158021_c0_seq1;Dir=indeterminatecoverage=98.7;identity=95.2;matches=747;mismatches=37;indels=1;unknowns=0;Target=comp158021_c0_seq1 572 71 .;locus=RLOC_00022729
Chr2	stalkie_big_nohaplotig	exon	151296647	151296871	87	-	.	Parent=comp158021_c0_seq1.mrna1;Target=comp158021_c0_seq1 948 725 .
Chr2	stalkie_big_nohaplotig	exon	151296913	151297472	98	-	.	Parent=comp158021_c0_seq1.mrna1;Target=comp158021_c0_seq1 572 13 .
Chr2	stalkie_big_nohaplotig	CDS	151296913	151297414	.	-	0	Parent=comp158021_c0_seq1.mrna1
Chr2	gffcl	locus	151337589	151351921	.	+	.	ID=RLOC_00022730;geneIDs=FBgn0015622.1.path1;transcripts=FBgn0015622.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151337589	151351921	.	+	.	ID=FBgn0015622.1.mrna1;geneID=FBgn0015622.1.path1;Name=FBgn0015622.1;Dir=sensecoverage=100.0;identity=99.7;matches=1840;mismatches=5;indels=0;unknowns=0;locus=RLOC_00022730
Chr2	stalkie_big_nohaplotig	exon	151337589	151337726	100	+	.	Parent=FBgn0015622.1.mrna1;Target=FBgn0015622.1 1 138 +
Chr2	stalkie_big_nohaplotig	exon	151338388	151338732	100	+	.	Parent=FBgn0015622.1.mrna1;Target=FBgn0015622.1 139 483 +
Chr2	stalkie_big_nohaplotig	exon	151338846	151338917	100	+	.	Parent=FBgn0015622.1.mrna1;Target=FBgn0015622.1 484 555 +
Chr2	stalkie_big_nohaplotig	exon	151338983	151339116	100	+	.	Parent=FBgn0015622.1.mrna1;Target=FBgn0015622.1 556 689 +
Chr2	stalkie_big_nohaplotig	exon	151340038	151340245	100	+	.	Parent=FBgn0015622.1.mrna1;Target=FBgn0015622.1 690 897 +
Chr2	stalkie_big_nohaplotig	exon	151340317	151340437	100	+	.	Parent=FBgn0015622.1.mrna1;Target=FBgn0015622.1 898 1018 +
Chr2	stalkie_big_nohaplotig	exon	151340501	151340760	100	+	.	Parent=FBgn0015622.1.mrna1;Target=FBgn0015622.1 1019 1278 +
Chr2	stalkie_big_nohaplotig	exon	151340827	151340967	100	+	.	Parent=FBgn0015622.1.mrna1;Target=FBgn0015622.1 1279 1419 +
Chr2	stalkie_big_nohaplotig	exon	151341555	151341677	99	+	.	Parent=FBgn0015622.1.mrna1;Target=FBgn0015622.1 1420 1542 +
Chr2	stalkie_big_nohaplotig	exon	151351559	151351801	99	+	.	Parent=FBgn0015622.1.mrna1;Target=FBgn0015622.1 1543 1785 +
Chr2	stalkie_big_nohaplotig	exon	151351862	151351921	95	+	.	Parent=FBgn0015622.1.mrna1;Target=FBgn0015622.1 1786 1845 +
Chr2	stalkie_big_nohaplotig	CDS	151337589	151337726	.	+	0	Parent=FBgn0015622.1.mrna1;Target=FBgn0015622.1 1 138 +
Chr2	stalkie_big_nohaplotig	CDS	151338388	151338732	.	+	0	Parent=FBgn0015622.1.mrna1;Target=FBgn0015622.1 139 483 +
Chr2	stalkie_big_nohaplotig	CDS	151338846	151338917	.	+	0	Parent=FBgn0015622.1.mrna1;Target=FBgn0015622.1 484 555 +
Chr2	stalkie_big_nohaplotig	CDS	151338983	151339116	.	+	0	Parent=FBgn0015622.1.mrna1;Target=FBgn0015622.1 556 689 +
Chr2	stalkie_big_nohaplotig	CDS	151340038	151340245	.	+	1	Parent=FBgn0015622.1.mrna1;Target=FBgn0015622.1 690 897 +
Chr2	stalkie_big_nohaplotig	CDS	151340317	151340437	.	+	0	Parent=FBgn0015622.1.mrna1;Target=FBgn0015622.1 898 1018 +
Chr2	stalkie_big_nohaplotig	CDS	151340501	151340760	.	+	2	Parent=FBgn0015622.1.mrna1;Target=FBgn0015622.1 1019 1278 +
Chr2	stalkie_big_nohaplotig	CDS	151340827	151340967	.	+	0	Parent=FBgn0015622.1.mrna1;Target=FBgn0015622.1 1279 1419 +
Chr2	stalkie_big_nohaplotig	CDS	151341555	151341677	.	+	0	Parent=FBgn0015622.1.mrna1;Target=FBgn0015622.1 1420 1542 +
Chr2	stalkie_big_nohaplotig	CDS	151351559	151351801	.	+	0	Parent=FBgn0015622.1.mrna1;Target=FBgn0015622.1 1543 1785 +
Chr2	stalkie_big_nohaplotig	CDS	151351862	151351921	.	+	0	Parent=FBgn0015622.1.mrna1;Target=FBgn0015622.1 1786 1845 +
Chr2	gffcl	locus	151341936	151342836	.	+	.	ID=RLOC_00022731;geneIDs=comp144564_c0_seq1.path1;transcripts=comp144564_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151341936	151342836	.	+	.	ID=comp144564_c0_seq1.mrna1;geneID=comp144564_c0_seq1.path1;Name=comp144564_c0_seq1;Dir=indeterminatecoverage=98.3;identity=100.0;matches=901;mismatches=0;indels=0;unknowns=0;Target=comp144564_c0_seq1 917 17 .;CDS_Target=comp144564_c0_seq1 572 402 .;locus=RLOC_00022731
Chr2	stalkie_big_nohaplotig	exon	151341936	151342836	100	+	.	Parent=comp144564_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	151342321	151342491	.	+	0	Parent=comp144564_c0_seq1.mrna1
Chr2	gffcl	locus	151348395	151354486	.	+	.	ID=RLOC_00022732;geneIDs=comp154928_c0_seq1.path1;transcripts=comp154928_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151348395	151354486	.	+	.	ID=comp154928_c0_seq1.mrna1;geneID=comp154928_c0_seq1.path1;Name=comp154928_c0_seq1;Dir=antisensecoverage=99.9;identity=98.5;matches=1628;mismatches=21;indels=3;unknowns=0;Target=comp154928_c0_seq1 1514 1651 .;locus=RLOC_00022732
Chr2	stalkie_big_nohaplotig	exon	151348395	151348629	98	+	.	Parent=comp154928_c0_seq1.mrna1;Target=comp154928_c0_seq1 1419 1653 -
Chr2	stalkie_big_nohaplotig	exon	151348690	151349194	98	+	.	Parent=comp154928_c0_seq1.mrna1;Target=comp154928_c0_seq1 914 1418 -
Chr2	stalkie_big_nohaplotig	exon	151353578	151354486	98	+	.	Parent=comp154928_c0_seq1.mrna1;Target=comp154928_c0_seq1 2 913 -
Chr2	stalkie_big_nohaplotig	CDS	151348397	151348534	.	+	0	Parent=comp154928_c0_seq1.mrna1
Chr2	gffcl	locus	151375684	151376543	.	+	.	ID=RLOC_00022733;geneIDs=comp156616_c0_seq1.path1;transcripts=comp156616_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151375684	151376543	.	+	.	ID=comp156616_c0_seq1.mrna1;geneID=comp156616_c0_seq1.path1;Name=comp156616_c0_seq1;Dir=sensecoverage=100.0;identity=98.8;matches=793;mismatches=10;indels=0;unknowns=0;Target=comp156616_c0_seq1 90 266 +;locus=RLOC_00022733
Chr2	stalkie_big_nohaplotig	exon	151375684	151376383	98	+	.	Parent=comp156616_c0_seq1.mrna1;Target=comp156616_c0_seq1 1 700 +
Chr2	stalkie_big_nohaplotig	exon	151376441	151376543	99	+	.	Parent=comp156616_c0_seq1.mrna1;Target=comp156616_c0_seq1 701 803 +
Chr2	stalkie_big_nohaplotig	CDS	151375773	151375949	.	+	0	Parent=comp156616_c0_seq1.mrna1
Chr2	gffcl	locus	151454725	151455597	.	+	.	ID=RLOC_00022734;geneIDs=FBgn0004363.2.path1;transcripts=FBgn0004363.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151454725	151455597	.	+	.	ID=FBgn0004363.2.mrna1;geneID=FBgn0004363.2.path1;Name=FBgn0004363.2;Dir=indeterminatecoverage=100.0;identity=99.1;matches=865;mismatches=8;indels=0;unknowns=0;Target=FBgn0004363.2 873 1 .;locus=RLOC_00022734
Chr2	stalkie_big_nohaplotig	exon	151454725	151455597	99	+	.	Parent=FBgn0004363.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	151454725	151455597	.	+	0	Parent=FBgn0004363.2.mrna1
Chr2	gffcl	locus	151514172	151515222	.	+	.	ID=RLOC_00022735;geneIDs=comp152111_c1_seq1.path1;transcripts=comp152111_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151514172	151515222	.	+	.	ID=comp152111_c1_seq1.mrna1;geneID=comp152111_c1_seq1.path1;Name=comp152111_c1_seq1;Dir=indeterminatecoverage=99.7;identity=97.8;matches=1031;mismatches=14;indels=9;unknowns=0;Target=comp152111_c1_seq1 1048 1 .;CDS_Target=comp152111_c1_seq1 748 575 .;locus=RLOC_00022735
Chr2	stalkie_big_nohaplotig	exon	151514172	151515222	97	+	.	Parent=comp152111_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	151514746	151514919	.	+	0	Parent=comp152111_c1_seq1.mrna1
Chr2	gffcl	locus	151560233	151575422	.	+	.	ID=RLOC_00022736;geneIDs=FBgn0039594.1.path2;transcripts=FBgn0039594.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	151560233	151575422	.	+	.	ID=FBgn0039594.1.mrna2;geneID=FBgn0039594.1.path2;Name=FBgn0039594.1;Dir=sensecoverage=94.4;identity=99.3;matches=2254;mismatches=15;indels=0;unknowns=0;locus=RLOC_00022736
Chr2	stalkie_big_nohaplotig	exon	151560233	151560400	99	+	.	Parent=FBgn0039594.1.mrna2;Target=FBgn0039594.1 135 302 +
Chr2	stalkie_big_nohaplotig	exon	151568529	151569045	99	+	.	Parent=FBgn0039594.1.mrna2;Target=FBgn0039594.1 303 819 +
Chr2	stalkie_big_nohaplotig	exon	151569636	151569784	99	+	.	Parent=FBgn0039594.1.mrna2;Target=FBgn0039594.1 820 968 +
Chr2	stalkie_big_nohaplotig	exon	151570135	151570276	99	+	.	Parent=FBgn0039594.1.mrna2;Target=FBgn0039594.1 969 1110 +
Chr2	stalkie_big_nohaplotig	exon	151572079	151572171	98	+	.	Parent=FBgn0039594.1.mrna2;Target=FBgn0039594.1 1111 1203 +
Chr2	stalkie_big_nohaplotig	exon	151572266	151572451	98	+	.	Parent=FBgn0039594.1.mrna2;Target=FBgn0039594.1 1204 1389 +
Chr2	stalkie_big_nohaplotig	exon	151572527	151572725	99	+	.	Parent=FBgn0039594.1.mrna2;Target=FBgn0039594.1 1390 1588 +
Chr2	stalkie_big_nohaplotig	exon	151572791	151573040	99	+	.	Parent=FBgn0039594.1.mrna2;Target=FBgn0039594.1 1589 1838 +
Chr2	stalkie_big_nohaplotig	exon	151574384	151574444	100	+	.	Parent=FBgn0039594.1.mrna2;Target=FBgn0039594.1 1839 1899 +
Chr2	stalkie_big_nohaplotig	exon	151574838	151575169	99	+	.	Parent=FBgn0039594.1.mrna2;Target=FBgn0039594.1 1900 2231 +
Chr2	stalkie_big_nohaplotig	exon	151575251	151575422	99	+	.	Parent=FBgn0039594.1.mrna2;Target=FBgn0039594.1 2232 2403 +
Chr2	stalkie_big_nohaplotig	CDS	151560233	151560400	.	+	2	Parent=FBgn0039594.1.mrna2;Target=FBgn0039594.1 135 302 +
Chr2	stalkie_big_nohaplotig	CDS	151568529	151569045	.	+	2	Parent=FBgn0039594.1.mrna2;Target=FBgn0039594.1 303 819 +
Chr2	stalkie_big_nohaplotig	CDS	151569636	151569784	.	+	1	Parent=FBgn0039594.1.mrna2;Target=FBgn0039594.1 820 968 +
Chr2	stalkie_big_nohaplotig	CDS	151570135	151570276	.	+	2	Parent=FBgn0039594.1.mrna2;Target=FBgn0039594.1 969 1110 +
Chr2	stalkie_big_nohaplotig	CDS	151572079	151572171	.	+	1	Parent=FBgn0039594.1.mrna2;Target=FBgn0039594.1 1111 1203 +
Chr2	stalkie_big_nohaplotig	CDS	151572266	151572451	.	+	1	Parent=FBgn0039594.1.mrna2;Target=FBgn0039594.1 1204 1389 +
Chr2	stalkie_big_nohaplotig	CDS	151572527	151572725	.	+	1	Parent=FBgn0039594.1.mrna2;Target=FBgn0039594.1 1390 1588 +
Chr2	stalkie_big_nohaplotig	CDS	151572791	151573040	.	+	0	Parent=FBgn0039594.1.mrna2;Target=FBgn0039594.1 1589 1838 +
Chr2	stalkie_big_nohaplotig	CDS	151574384	151574444	.	+	2	Parent=FBgn0039594.1.mrna2;Target=FBgn0039594.1 1839 1899 +
Chr2	stalkie_big_nohaplotig	CDS	151574838	151575169	.	+	1	Parent=FBgn0039594.1.mrna2;Target=FBgn0039594.1 1900 2231 +
Chr2	stalkie_big_nohaplotig	CDS	151575251	151575422	.	+	2	Parent=FBgn0039594.1.mrna2;Target=FBgn0039594.1 2232 2403 +
Chr2	gffcl	locus	151571404	151571789	.	-	.	ID=RLOC_00022737;geneIDs=comp138714_c0_seq1.path1;transcripts=comp138714_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151571404	151571789	.	-	.	ID=comp138714_c0_seq1.mrna1;geneID=comp138714_c0_seq1.path1;Name=comp138714_c0_seq1;Dir=indeterminatecoverage=99.5;identity=93.5;matches=361;mismatches=16;indels=9;unknowns=0;Target=comp138714_c0_seq1 377 1 .;CDS_Target=comp138714_c0_seq1 68 3 .;locus=RLOC_00022737
Chr2	stalkie_big_nohaplotig	exon	151571404	151571789	93	-	.	Parent=comp138714_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	151571713	151571787	.	-	0	Parent=comp138714_c0_seq1.mrna1
Chr2	gffcl	locus	151575917	151576544	.	+	.	ID=RLOC_00022738;geneIDs=comp123114_c0_seq1.path1;transcripts=comp123114_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151575917	151576544	.	+	.	ID=comp123114_c0_seq1.mrna1;geneID=comp123114_c0_seq1.path1;Name=comp123114_c0_seq1;Dir=indeterminatecoverage=94.6;identity=96.1;matches=617;mismatches=2;indels=23;unknowns=0;Target=comp123114_c0_seq1 669 37 .;CDS_Target=comp123114_c0_seq1 145 38 .;locus=RLOC_00022738
Chr2	stalkie_big_nohaplotig	exon	151575917	151576544	96	+	.	Parent=comp123114_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	151575918	151576025	.	+	0	Parent=comp123114_c0_seq1.mrna1
Chr2	gffcl	locus	151579353	151609266	.	+	.	ID=RLOC_00022739;geneIDs=comp163302_c1_seq1.path1;transcripts=comp163302_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151579353	151609266	.	+	.	ID=comp163302_c1_seq1.mrna1;geneID=comp163302_c1_seq1.path1;Name=comp163302_c1_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=4128;mismatches=40;indels=7;unknowns=0;locus=RLOC_00022739
Chr2	stalkie_big_nohaplotig	exon	151579353	151579642	100	+	.	Parent=comp163302_c1_seq1.mrna1;Target=comp163302_c1_seq1 3880 4169 -
Chr2	stalkie_big_nohaplotig	exon	151579700	151579957	99	+	.	Parent=comp163302_c1_seq1.mrna1;Target=comp163302_c1_seq1 3622 3879 -
Chr2	stalkie_big_nohaplotig	exon	151580029	151580245	99	+	.	Parent=comp163302_c1_seq1.mrna1;Target=comp163302_c1_seq1 3405 3621 -
Chr2	stalkie_big_nohaplotig	exon	151583209	151583338	100	+	.	Parent=comp163302_c1_seq1.mrna1;Target=comp163302_c1_seq1 3275 3404 -
Chr2	stalkie_big_nohaplotig	exon	151595600	151596619	99	+	.	Parent=comp163302_c1_seq1.mrna1;Target=comp163302_c1_seq1 2254 3274 -
Chr2	stalkie_big_nohaplotig	exon	151596900	151597571	98	+	.	Parent=comp163302_c1_seq1.mrna1;Target=comp163302_c1_seq1 1582 2253 -
Chr2	stalkie_big_nohaplotig	exon	151606436	151606819	97	+	.	Parent=comp163302_c1_seq1.mrna1;Target=comp163302_c1_seq1 1204 1581 -
Chr2	stalkie_big_nohaplotig	exon	151606899	151607935	98	+	.	Parent=comp163302_c1_seq1.mrna1;Target=comp163302_c1_seq1 167 1203 -
Chr2	stalkie_big_nohaplotig	exon	151609101	151609266	100	+	.	Parent=comp163302_c1_seq1.mrna1;Target=comp163302_c1_seq1 1 166 -
Chr2	stalkie_big_nohaplotig	CDS	151579575	151579642	.	+	0	Parent=comp163302_c1_seq1.mrna1;Target=comp163302_c1_seq1 3880 3947 .
Chr2	stalkie_big_nohaplotig	CDS	151579700	151579957	.	+	1	Parent=comp163302_c1_seq1.mrna1;Target=comp163302_c1_seq1 3622 3879 .
Chr2	stalkie_big_nohaplotig	CDS	151580029	151580245	.	+	1	Parent=comp163302_c1_seq1.mrna1;Target=comp163302_c1_seq1 3405 3621 .
Chr2	stalkie_big_nohaplotig	CDS	151583209	151583338	.	+	0	Parent=comp163302_c1_seq1.mrna1;Target=comp163302_c1_seq1 3275 3404 .
Chr2	stalkie_big_nohaplotig	CDS	151595600	151596215	.	+	2	Parent=comp163302_c1_seq1.mrna1;Target=comp163302_c1_seq1 2658 3274 .
Chr2	gffcl	locus	151580821	151594581	.	-	.	ID=RLOC_00022740;geneIDs=comp163636_c2_seq1.path1;transcripts=comp163636_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151580821	151594581	.	-	.	ID=comp163636_c2_seq1.mrna1;geneID=comp163636_c2_seq1.path1;Name=comp163636_c2_seq1;Dir=sensecoverage=90.2;identity=94.7;matches=3444;mismatches=121;indels=70;unknowns=0;locus=RLOC_00022740
Chr2	stalkie_big_nohaplotig	exon	151580821	151581228	94	-	.	Parent=comp163636_c2_seq1.mrna1;Target=comp163636_c2_seq1 3614 4021 +
Chr2	stalkie_big_nohaplotig	exon	151581348	151581911	87	-	.	Parent=comp163636_c2_seq1.mrna1;Target=comp163636_c2_seq1 3017 3613 +
Chr2	stalkie_big_nohaplotig	exon	151588320	151588562	99	-	.	Parent=comp163636_c2_seq1.mrna1;Target=comp163636_c2_seq1 2752 2994 +
Chr2	stalkie_big_nohaplotig	exon	151591184	151592416	97	-	.	Parent=comp163636_c2_seq1.mrna1;Target=comp163636_c2_seq1 1531 2751 +
Chr2	stalkie_big_nohaplotig	exon	151592950	151593220	97	-	.	Parent=comp163636_c2_seq1.mrna1;Target=comp163636_c2_seq1 1260 1530 +
Chr2	stalkie_big_nohaplotig	exon	151593281	151593379	100	-	.	Parent=comp163636_c2_seq1.mrna1;Target=comp163636_c2_seq1 1161 1259 +
Chr2	stalkie_big_nohaplotig	exon	151593606	151593738	97	-	.	Parent=comp163636_c2_seq1.mrna1;Target=comp163636_c2_seq1 1028 1160 +
Chr2	stalkie_big_nohaplotig	exon	151593809	151593901	89	-	.	Parent=comp163636_c2_seq1.mrna1;Target=comp163636_c2_seq1 935 1027 +
Chr2	stalkie_big_nohaplotig	exon	151593952	151594130	81	-	.	Parent=comp163636_c2_seq1.mrna1;Target=comp163636_c2_seq1 769 934 +
Chr2	stalkie_big_nohaplotig	exon	151594210	151594581	97	-	.	Parent=comp163636_c2_seq1.mrna1;Target=comp163636_c2_seq1 397 768 +
Chr2	stalkie_big_nohaplotig	CDS	151593052	151593220	.	-	0	Parent=comp163636_c2_seq1.mrna1;Target=comp163636_c2_seq1 1260 1428 +
Chr2	stalkie_big_nohaplotig	CDS	151593281	151593379	.	-	0	Parent=comp163636_c2_seq1.mrna1;Target=comp163636_c2_seq1 1161 1259 +
Chr2	stalkie_big_nohaplotig	CDS	151593606	151593738	.	-	1	Parent=comp163636_c2_seq1.mrna1;Target=comp163636_c2_seq1 1028 1160 +
Chr2	stalkie_big_nohaplotig	CDS	151593809	151593901	.	-	1	Parent=comp163636_c2_seq1.mrna1;Target=comp163636_c2_seq1 935 1027 +
Chr2	stalkie_big_nohaplotig	CDS	151593952	151594130	.	-	0	Parent=comp163636_c2_seq1.mrna1;Target=comp163636_c2_seq1 769 934 +
Chr2	stalkie_big_nohaplotig	CDS	151594210	151594581	.	-	0	Parent=comp163636_c2_seq1.mrna1;Target=comp163636_c2_seq1 397 768 +
Chr2	gffcl	locus	151619233	151630675	.	+	.	ID=RLOC_00022741;geneIDs=FBgn0027655.path1;transcripts=FBgn0027655.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151619233	151630675	.	+	.	ID=FBgn0027655.mrna1;geneID=FBgn0027655.path1;Name=FBgn0027655;Dir=sensecoverage=99.9;identity=99.6;matches=1942;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022741
Chr2	stalkie_big_nohaplotig	exon	151619233	151619469	100	+	.	Parent=FBgn0027655.mrna1;Target=FBgn0027655 1 237 +
Chr2	stalkie_big_nohaplotig	exon	151621015	151621644	99	+	.	Parent=FBgn0027655.mrna1;Target=FBgn0027655 238 867 +
Chr2	stalkie_big_nohaplotig	exon	151621791	151621948	99	+	.	Parent=FBgn0027655.mrna1;Target=FBgn0027655 868 1025 +
Chr2	stalkie_big_nohaplotig	exon	151622146	151622905	99	+	.	Parent=FBgn0027655.mrna1;Target=FBgn0027655 1026 1785 +
Chr2	stalkie_big_nohaplotig	exon	151630512	151630675	98	+	.	Parent=FBgn0027655.mrna1;Target=FBgn0027655 1786 1949 +
Chr2	stalkie_big_nohaplotig	CDS	151619233	151619469	.	+	0	Parent=FBgn0027655.mrna1;Target=FBgn0027655 1 237 +
Chr2	stalkie_big_nohaplotig	CDS	151621015	151621644	.	+	0	Parent=FBgn0027655.mrna1;Target=FBgn0027655 238 867 +
Chr2	stalkie_big_nohaplotig	CDS	151621791	151621948	.	+	0	Parent=FBgn0027655.mrna1;Target=FBgn0027655 868 1025 +
Chr2	stalkie_big_nohaplotig	CDS	151622146	151622905	.	+	1	Parent=FBgn0027655.mrna1;Target=FBgn0027655 1026 1785 +
Chr2	stalkie_big_nohaplotig	CDS	151630512	151630673	.	+	0	Parent=FBgn0027655.mrna1;Target=FBgn0027655 1786 1947 +
Chr2	gffcl	locus	151630997	151677093	.	+	.	ID=RLOC_00022742;geneIDs=comp163373_c3_seq1.path1;transcripts=comp163373_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151630997	151677093	.	+	.	ID=comp163373_c3_seq1.mrna1;geneID=comp163373_c3_seq1.path1;Name=comp163373_c3_seq1;Dir=antisensecoverage=99.3;identity=99.5;matches=5133;mismatches=24;indels=1;unknowns=0;locus=RLOC_00022742
Chr2	stalkie_big_nohaplotig	exon	151630997	151631384	99	+	.	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 4809 5196 -
Chr2	stalkie_big_nohaplotig	exon	151634231	151634404	100	+	.	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 4635 4808 -
Chr2	stalkie_big_nohaplotig	exon	151634592	151634869	99	+	.	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 4357 4634 -
Chr2	stalkie_big_nohaplotig	exon	151635023	151635122	99	+	.	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 4257 4356 -
Chr2	stalkie_big_nohaplotig	exon	151638022	151639167	99	+	.	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 3111 4256 -
Chr2	stalkie_big_nohaplotig	exon	151639309	151639544	98	+	.	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 2875 3110 -
Chr2	stalkie_big_nohaplotig	exon	151645926	151646177	100	+	.	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 2623 2874 -
Chr2	stalkie_big_nohaplotig	exon	151651098	151651500	99	+	.	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 2220 2622 -
Chr2	stalkie_big_nohaplotig	exon	151653855	151653992	100	+	.	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 2082 2219 -
Chr2	stalkie_big_nohaplotig	exon	151654220	151654479	100	+	.	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 1822 2081 -
Chr2	stalkie_big_nohaplotig	exon	151657487	151657661	100	+	.	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 1647 1821 -
Chr2	stalkie_big_nohaplotig	exon	151661715	151661937	98	+	.	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 1424 1646 -
Chr2	stalkie_big_nohaplotig	exon	151674664	151674932	100	+	.	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 1155 1423 -
Chr2	stalkie_big_nohaplotig	exon	151675979	151677093	99	+	.	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 39 1154 -
Chr2	stalkie_big_nohaplotig	CDS	151630998	151631384	.	+	0	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 4809 5195 .
Chr2	stalkie_big_nohaplotig	CDS	151634231	151634404	.	+	0	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 4635 4808 .
Chr2	stalkie_big_nohaplotig	CDS	151634592	151634869	.	+	0	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 4357 4634 .
Chr2	stalkie_big_nohaplotig	CDS	151635023	151635122	.	+	1	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 4257 4356 .
Chr2	stalkie_big_nohaplotig	CDS	151638022	151639167	.	+	0	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 3111 4256 .
Chr2	stalkie_big_nohaplotig	CDS	151639309	151639544	.	+	0	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 2875 3110 .
Chr2	stalkie_big_nohaplotig	CDS	151645926	151646177	.	+	1	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 2623 2874 .
Chr2	stalkie_big_nohaplotig	CDS	151651098	151651500	.	+	1	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 2220 2622 .
Chr2	stalkie_big_nohaplotig	CDS	151653855	151653992	.	+	0	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 2082 2219 .
Chr2	stalkie_big_nohaplotig	CDS	151654220	151654479	.	+	0	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 1822 2081 .
Chr2	stalkie_big_nohaplotig	CDS	151657487	151657661	.	+	1	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 1647 1821 .
Chr2	stalkie_big_nohaplotig	CDS	151661715	151661937	.	+	0	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 1424 1646 .
Chr2	stalkie_big_nohaplotig	CDS	151674664	151674932	.	+	2	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 1155 1423 .
Chr2	stalkie_big_nohaplotig	CDS	151675979	151676320	.	+	0	Parent=comp163373_c3_seq1.mrna1;Target=comp163373_c3_seq1 813 1154 .
Chr2	gffcl	locus	151678728	151679723	.	+	.	ID=RLOC_00022743;geneIDs=comp157972_c0_seq1.path1;transcripts=comp157972_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151678728	151679723	.	+	.	ID=comp157972_c0_seq1.mrna1;geneID=comp157972_c0_seq1.path1;Name=comp157972_c0_seq1;Dir=indeterminatecoverage=100.0;identity=93.2;matches=953;mismatches=39;indels=30;unknowns=0;Target=comp157972_c0_seq1 1018 1 .;CDS_Target=comp157972_c0_seq1 635 582 .;locus=RLOC_00022743
Chr2	stalkie_big_nohaplotig	exon	151678728	151679723	93	+	.	Parent=comp157972_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	151679291	151679344	.	+	0	Parent=comp157972_c0_seq1.mrna1
Chr2	gffcl	locus	151707582	153088511	.	-	.	ID=RLOC_00022744;geneIDs=comp160960_c10_seq1.path1;transcripts=comp160960_c10_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151707582	153088511	.	-	.	ID=comp160960_c10_seq1.mrna1;geneID=comp160960_c10_seq1.path1;Name=comp160960_c10_seq1;Dir=indeterminatecoverage=77.0;identity=94.4;matches=930;mismatches=25;indels=30;unknowns=0;locus=RLOC_00022744
Chr2	stalkie_big_nohaplotig	exon	151707582	151707590	100	-	.	Parent=comp160960_c10_seq1.mrna1;Target=comp160960_c10_seq1 992 984 .
Chr2	stalkie_big_nohaplotig	exon	151708571	151708583	54	-	.	Parent=comp160960_c10_seq1.mrna1;Target=comp160960_c10_seq1 983 960 .
Chr2	stalkie_big_nohaplotig	exon	151711799	151711815	82	-	.	Parent=comp160960_c10_seq1.mrna1;Target=comp160960_c10_seq1 959 943 .
Chr2	stalkie_big_nohaplotig	exon	151712914	151712921	100	-	.	Parent=comp160960_c10_seq1.mrna1;Target=comp160960_c10_seq1 942 935 .
Chr2	stalkie_big_nohaplotig	exon	151716854	151716855	100	-	.	Parent=comp160960_c10_seq1.mrna1;Target=comp160960_c10_seq1 934 933 .
Chr2	stalkie_big_nohaplotig	exon	151723268	151723269	100	-	.	Parent=comp160960_c10_seq1.mrna1;Target=comp160960_c10_seq1 932 931 .
Chr2	stalkie_big_nohaplotig	exon	151731440	151731443	100	-	.	Parent=comp160960_c10_seq1.mrna1;Target=comp160960_c10_seq1 930 927 .
Chr2	stalkie_big_nohaplotig	exon	151739236	151739247	91	-	.	Parent=comp160960_c10_seq1.mrna1;Target=comp160960_c10_seq1 926 915 .
Chr2	stalkie_big_nohaplotig	exon	151739933	151739944	83	-	.	Parent=comp160960_c10_seq1.mrna1;Target=comp160960_c10_seq1 914 904 .
Chr2	stalkie_big_nohaplotig	exon	151746554	151746555	100	-	.	Parent=comp160960_c10_seq1.mrna1;Target=comp160960_c10_seq1 903 902 .
Chr2	stalkie_big_nohaplotig	exon	151751279	151751301	86	-	.	Parent=comp160960_c10_seq1.mrna1;Target=comp160960_c10_seq1 901 879 .
Chr2	stalkie_big_nohaplotig	exon	151760089	151760098	100	-	.	Parent=comp160960_c10_seq1.mrna1;Target=comp160960_c10_seq1 861 852 .
Chr2	stalkie_big_nohaplotig	exon	151767696	151767701	100	-	.	Parent=comp160960_c10_seq1.mrna1;Target=comp160960_c10_seq1 851 846 .
Chr2	stalkie_big_nohaplotig	exon	153087581	153088335	95	-	.	Parent=comp160960_c10_seq1.mrna1;Target=comp160960_c10_seq1 845 89 .
Chr2	stalkie_big_nohaplotig	exon	153088424	153088511	95	-	.	Parent=comp160960_c10_seq1.mrna1;Target=comp160960_c10_seq1 88 1 .
Chr2	stalkie_big_nohaplotig	CDS	153088224	153088335	.	-	1	Parent=comp160960_c10_seq1.mrna1;Target=comp160960_c10_seq1 200 89 .
Chr2	stalkie_big_nohaplotig	CDS	153088424	153088509	.	-	0	Parent=comp160960_c10_seq1.mrna1;Target=comp160960_c10_seq1 88 3 .
Chr2	gffcl	locus	151714944	151737929	.	-	.	ID=RLOC_00022745;geneIDs=FBgn0039595.1.path1;transcripts=FBgn0039595.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151714944	151737929	.	-	.	ID=FBgn0039595.1.mrna1;geneID=FBgn0039595.1.path1;Name=FBgn0039595.1;Dir=sensecoverage=100.0;identity=99.5;matches=1054;mismatches=5;indels=0;unknowns=0;locus=RLOC_00022745
Chr2	stalkie_big_nohaplotig	exon	151714944	151715042	98	-	.	Parent=FBgn0039595.1.mrna1;Target=FBgn0039595.1 961 1059 +
Chr2	stalkie_big_nohaplotig	exon	151725777	151725935	100	-	.	Parent=FBgn0039595.1.mrna1;Target=FBgn0039595.1 802 960 +
Chr2	stalkie_big_nohaplotig	exon	151726128	151726403	100	-	.	Parent=FBgn0039595.1.mrna1;Target=FBgn0039595.1 526 801 +
Chr2	stalkie_big_nohaplotig	exon	151737405	151737929	99	-	.	Parent=FBgn0039595.1.mrna1;Target=FBgn0039595.1 1 525 +
Chr2	stalkie_big_nohaplotig	CDS	151714944	151715042	.	-	0	Parent=FBgn0039595.1.mrna1;Target=FBgn0039595.1 961 1059 +
Chr2	stalkie_big_nohaplotig	CDS	151725777	151725935	.	-	0	Parent=FBgn0039595.1.mrna1;Target=FBgn0039595.1 802 960 +
Chr2	stalkie_big_nohaplotig	CDS	151726128	151726403	.	-	0	Parent=FBgn0039595.1.mrna1;Target=FBgn0039595.1 526 801 +
Chr2	stalkie_big_nohaplotig	CDS	151737405	151737929	.	-	0	Parent=FBgn0039595.1.mrna1;Target=FBgn0039595.1 1 525 +
Chr2	gffcl	locus	151767898	151771338	.	+	.	ID=RLOC_00022746;geneIDs=FBgn0039492.1.path2;transcripts=FBgn0039492.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	151767898	151771338	.	+	.	ID=FBgn0039492.1.mrna2;geneID=FBgn0039492.1.path2;Name=FBgn0039492.1;Dir=sensecoverage=96.9;identity=99.6;matches=3216;mismatches=12;indels=0;unknowns=0;locus=RLOC_00022746
Chr2	stalkie_big_nohaplotig	exon	151767898	151768038	98	+	.	Parent=FBgn0039492.1.mrna2;Target=FBgn0039492.1 103 243 +
Chr2	stalkie_big_nohaplotig	exon	151768105	151768845	99	+	.	Parent=FBgn0039492.1.mrna2;Target=FBgn0039492.1 244 984 +
Chr2	stalkie_big_nohaplotig	exon	151768915	151770152	99	+	.	Parent=FBgn0039492.1.mrna2;Target=FBgn0039492.1 985 2222 +
Chr2	stalkie_big_nohaplotig	exon	151770231	151771338	100	+	.	Parent=FBgn0039492.1.mrna2;Target=FBgn0039492.1 2223 3330 +
Chr2	stalkie_big_nohaplotig	CDS	151767898	151768038	.	+	0	Parent=FBgn0039492.1.mrna2;Target=FBgn0039492.1 103 243 +
Chr2	stalkie_big_nohaplotig	CDS	151768105	151768845	.	+	0	Parent=FBgn0039492.1.mrna2;Target=FBgn0039492.1 244 984 +
Chr2	stalkie_big_nohaplotig	CDS	151768915	151770152	.	+	0	Parent=FBgn0039492.1.mrna2;Target=FBgn0039492.1 985 2222 +
Chr2	stalkie_big_nohaplotig	CDS	151770231	151771338	.	+	1	Parent=FBgn0039492.1.mrna2;Target=FBgn0039492.1 2223 3330 +
Chr2	gffcl	locus	151773870	151778962	.	+	.	ID=RLOC_00022747;geneIDs=FBgn0039491.1.path1;transcripts=FBgn0039491.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151773870	151778962	.	+	.	ID=FBgn0039491.1.mrna1;geneID=FBgn0039491.1.path1;Name=FBgn0039491.1;Dir=sensecoverage=100.0;identity=100.0;matches=2724;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022747
Chr2	stalkie_big_nohaplotig	exon	151773870	151774055	100	+	.	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 1 186 +
Chr2	stalkie_big_nohaplotig	exon	151774117	151774336	100	+	.	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 187 406 +
Chr2	stalkie_big_nohaplotig	exon	151774405	151774534	100	+	.	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 407 536 +
Chr2	stalkie_big_nohaplotig	exon	151774611	151774905	100	+	.	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 537 831 +
Chr2	stalkie_big_nohaplotig	exon	151774984	151775178	100	+	.	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 832 1026 +
Chr2	stalkie_big_nohaplotig	exon	151775238	151775371	100	+	.	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 1027 1160 +
Chr2	stalkie_big_nohaplotig	exon	151776257	151776573	100	+	.	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 1161 1477 +
Chr2	stalkie_big_nohaplotig	exon	151776646	151776824	100	+	.	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 1478 1656 +
Chr2	stalkie_big_nohaplotig	exon	151776913	151777273	100	+	.	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 1657 2017 +
Chr2	stalkie_big_nohaplotig	exon	151778151	151778433	100	+	.	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 2018 2300 +
Chr2	stalkie_big_nohaplotig	exon	151778483	151778621	100	+	.	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 2301 2439 +
Chr2	stalkie_big_nohaplotig	exon	151778678	151778962	100	+	.	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 2440 2724 +
Chr2	stalkie_big_nohaplotig	CDS	151773870	151774055	.	+	0	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 1 186 +
Chr2	stalkie_big_nohaplotig	CDS	151774117	151774336	.	+	0	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 187 406 +
Chr2	stalkie_big_nohaplotig	CDS	151774405	151774534	.	+	2	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 407 536 +
Chr2	stalkie_big_nohaplotig	CDS	151774611	151774905	.	+	1	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 537 831 +
Chr2	stalkie_big_nohaplotig	CDS	151774984	151775178	.	+	0	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 832 1026 +
Chr2	stalkie_big_nohaplotig	CDS	151775238	151775371	.	+	0	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 1027 1160 +
Chr2	stalkie_big_nohaplotig	CDS	151776257	151776573	.	+	1	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 1161 1477 +
Chr2	stalkie_big_nohaplotig	CDS	151776646	151776824	.	+	2	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 1478 1656 +
Chr2	stalkie_big_nohaplotig	CDS	151776913	151777273	.	+	0	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 1657 2017 +
Chr2	stalkie_big_nohaplotig	CDS	151778151	151778433	.	+	2	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 2018 2300 +
Chr2	stalkie_big_nohaplotig	CDS	151778483	151778621	.	+	1	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 2301 2439 +
Chr2	stalkie_big_nohaplotig	CDS	151778678	151778962	.	+	0	Parent=FBgn0039491.1.mrna1;Target=FBgn0039491.1 2440 2724 +
Chr2	gffcl	locus	151794346	151794847	.	+	.	ID=RLOC_00022748;geneIDs=comp344286_c0_seq1.path1;transcripts=comp344286_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151794346	151794847	.	+	.	ID=comp344286_c0_seq1.mrna1;geneID=comp344286_c0_seq1.path1;Name=comp344286_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=502;mismatches=0;indels=0;unknowns=0;Target=comp344286_c0_seq1 502 1 .;CDS_Target=comp344286_c0_seq1 101 3 .;locus=RLOC_00022748
Chr2	stalkie_big_nohaplotig	exon	151794346	151794847	100	+	.	Parent=comp344286_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	151794348	151794446	.	+	0	Parent=comp344286_c0_seq1.mrna1
Chr2	gffcl	locus	151794947	151795080	.	+	.	ID=RLOC_00022749;geneIDs=FBgn0039594.1.path1;transcripts=FBgn0039594.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151794947	151795080	.	+	.	ID=FBgn0039594.1.mrna1;geneID=FBgn0039594.1.path1;Name=FBgn0039594.1;Dir=indeterminatecoverage=5.6;identity=98.5;matches=132;mismatches=2;indels=0;unknowns=0;Target=FBgn0039594.1 134 1 .;locus=RLOC_00022749
Chr2	stalkie_big_nohaplotig	exon	151794947	151795080	98	+	.	Parent=FBgn0039594.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	151794947	151795080	.	+	0	Parent=FBgn0039594.1.mrna1
Chr2	gffcl	locus	151824639	151824740	.	-	.	ID=RLOC_00022750;geneIDs=FBgn0039492.1.path1;transcripts=FBgn0039492.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151824639	151824740	.	-	.	ID=FBgn0039492.1.mrna1;geneID=FBgn0039492.1.path1;Name=FBgn0039492.1;Dir=indeterminatecoverage=3.1;identity=99.0;matches=101;mismatches=1;indels=0;unknowns=0;Target=FBgn0039492.1 102 1 .;locus=RLOC_00022750
Chr2	stalkie_big_nohaplotig	exon	151824639	151824740	99	-	.	Parent=FBgn0039492.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	151824639	151824740	.	-	0	Parent=FBgn0039492.1.mrna1
Chr2	gffcl	locus	151829816	151841823	.	+	.	ID=RLOC_00022752;geneIDs=comp119111_c0_seq1.path1,comp148684_c0_seq1.path1;transcripts=comp119111_c0_seq1.mrna1,comp148684_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151829816	151841823	.	+	.	ID=comp119111_c0_seq1.mrna1;geneID=comp119111_c0_seq1.path1;Name=comp119111_c0_seq1;Dir=indeterminatecoverage=80.9;identity=96.7;matches=234;mismatches=5;indels=3;unknowns=0;Target=comp119111_c0_seq1 214 185 .;locus=RLOC_00022752
Chr2	stalkie_big_nohaplotig	exon	151829816	151829824	100	+	.	Parent=comp119111_c0_seq1.mrna1;Target=comp119111_c0_seq1 38 30 .
Chr2	stalkie_big_nohaplotig	exon	151834122	151834127	100	+	.	Parent=comp119111_c0_seq1.mrna1;Target=comp119111_c0_seq1 44 39 .
Chr2	stalkie_big_nohaplotig	exon	151841600	151841823	96	+	.	Parent=comp119111_c0_seq1.mrna1;Target=comp119111_c0_seq1 271 45 .
Chr2	stalkie_big_nohaplotig	CDS	151841737	151841766	.	+	0	Parent=comp119111_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151837299	151841610	.	+	.	ID=comp148684_c0_seq1.mrna1;geneID=comp148684_c0_seq1.path1;Name=comp148684_c0_seq1;Dir=sensecoverage=95.2;identity=98.5;matches=655;mismatches=6;indels=4;unknowns=0;locus=RLOC_00022752
Chr2	stalkie_big_nohaplotig	exon	151837299	151837376	98	+	.	Parent=comp148684_c0_seq1.mrna1;Target=comp148684_c0_seq1 14 91 +
Chr2	stalkie_big_nohaplotig	exon	151840900	151841133	99	+	.	Parent=comp148684_c0_seq1.mrna1;Target=comp148684_c0_seq1 92 325 +
Chr2	stalkie_big_nohaplotig	exon	151841258	151841610	97	+	.	Parent=comp148684_c0_seq1.mrna1;Target=comp148684_c0_seq1 326 674 +
Chr2	stalkie_big_nohaplotig	CDS	151840928	151841133	.	+	0	Parent=comp148684_c0_seq1.mrna1;Target=comp148684_c0_seq1 120 325 +
Chr2	stalkie_big_nohaplotig	CDS	151841258	151841471	.	+	1	Parent=comp148684_c0_seq1.mrna1;Target=comp148684_c0_seq1 326 536 +
Chr2	gffcl	locus	151861048	151891410	.	-	.	ID=RLOC_00022753;geneIDs=FBgn0004863.1.path1;transcripts=FBgn0004863.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151861048	151891410	.	-	.	ID=FBgn0004863.1.mrna1;geneID=FBgn0004863.1.path1;Name=FBgn0004863.1;Dir=sensecoverage=100.0;identity=99.8;matches=952;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022753
Chr2	stalkie_big_nohaplotig	exon	151861048	151861243	100	-	.	Parent=FBgn0004863.1.mrna1;Target=FBgn0004863.1 759 954 +
Chr2	stalkie_big_nohaplotig	exon	151873863	151874091	100	-	.	Parent=FBgn0004863.1.mrna1;Target=FBgn0004863.1 530 758 +
Chr2	stalkie_big_nohaplotig	exon	151885578	151885927	99	-	.	Parent=FBgn0004863.1.mrna1;Target=FBgn0004863.1 180 529 +
Chr2	stalkie_big_nohaplotig	exon	151891232	151891410	100	-	.	Parent=FBgn0004863.1.mrna1;Target=FBgn0004863.1 1 179 +
Chr2	stalkie_big_nohaplotig	CDS	151861048	151861243	.	-	1	Parent=FBgn0004863.1.mrna1;Target=FBgn0004863.1 759 954 +
Chr2	stalkie_big_nohaplotig	CDS	151873863	151874091	.	-	2	Parent=FBgn0004863.1.mrna1;Target=FBgn0004863.1 530 758 +
Chr2	stalkie_big_nohaplotig	CDS	151885578	151885927	.	-	1	Parent=FBgn0004863.1.mrna1;Target=FBgn0004863.1 180 529 +
Chr2	stalkie_big_nohaplotig	CDS	151891232	151891410	.	-	0	Parent=FBgn0004863.1.mrna1;Target=FBgn0004863.1 1 179 +
Chr2	gffcl	locus	151940488	151941461	.	+	.	ID=RLOC_00022754;geneIDs=comp69045_c0_seq1.path1;transcripts=comp69045_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	151940488	151941461	.	+	.	ID=comp69045_c0_seq1.mrna1;geneID=comp69045_c0_seq1.path1;Name=comp69045_c0_seq1;Dir=indeterminatecoverage=99.9;identity=94.2;matches=918;mismatches=55;indels=2;unknowns=0;Target=comp69045_c0_seq1 975 2 .;CDS_Target=comp69045_c0_seq1 866 723 .;locus=RLOC_00022754
Chr2	stalkie_big_nohaplotig	exon	151940488	151941461	94	+	.	Parent=comp69045_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	151941210	151941352	.	+	0	Parent=comp69045_c0_seq1.mrna1
Chr2	gffcl	locus	152064725	153155793	.	+	.	ID=RLOC_00022757;geneIDs=FBgn0008651.1.path1,comp159375_c0_seq1.path1;transcripts=comp159375_c0_seq1.mrna1,FBgn0008651.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152064725	153155793	.	+	.	ID=comp159375_c0_seq1.mrna1;geneID=comp159375_c0_seq1.path1;Name=comp159375_c0_seq1;Dir=sensecoverage=86.5;identity=99.8;matches=2027;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022757
Chr2	stalkie_big_nohaplotig	exon	152064725	152065879	99	+	.	Parent=comp159375_c0_seq1.mrna1;Target=comp159375_c0_seq1 1 1155 +
Chr2	stalkie_big_nohaplotig	exon	152119602	152119937	100	+	.	Parent=comp159375_c0_seq1.mrna1;Target=comp159375_c0_seq1 1156 1491 +
Chr2	stalkie_big_nohaplotig	exon	152119990	152120484	100	+	.	Parent=comp159375_c0_seq1.mrna1;Target=comp159375_c0_seq1 1492 1986 +
Chr2	stalkie_big_nohaplotig	exon	153120299	153120301	100	+	.	Parent=comp159375_c0_seq1.mrna1;Target=comp159375_c0_seq1 1987 1989 +
Chr2	stalkie_big_nohaplotig	exon	153126906	153126911	100	+	.	Parent=comp159375_c0_seq1.mrna1;Target=comp159375_c0_seq1 1990 1995 +
Chr2	stalkie_big_nohaplotig	exon	153133914	153133919	100	+	.	Parent=comp159375_c0_seq1.mrna1;Target=comp159375_c0_seq1 1996 2001 +
Chr2	stalkie_big_nohaplotig	exon	153135252	153135254	100	+	.	Parent=comp159375_c0_seq1.mrna1;Target=comp159375_c0_seq1 2002 2004 +
Chr2	stalkie_big_nohaplotig	exon	153145356	153145360	100	+	.	Parent=comp159375_c0_seq1.mrna1;Target=comp159375_c0_seq1 2005 2009 +
Chr2	stalkie_big_nohaplotig	exon	153148682	153148687	100	+	.	Parent=comp159375_c0_seq1.mrna1;Target=comp159375_c0_seq1 2010 2015 +
Chr2	stalkie_big_nohaplotig	exon	153151883	153151890	100	+	.	Parent=comp159375_c0_seq1.mrna1;Target=comp159375_c0_seq1 2016 2023 +
Chr2	stalkie_big_nohaplotig	exon	153154673	153154675	100	+	.	Parent=comp159375_c0_seq1.mrna1;Target=comp159375_c0_seq1 2024 2026 +
Chr2	stalkie_big_nohaplotig	exon	153155790	153155793	100	+	.	Parent=comp159375_c0_seq1.mrna1;Target=comp159375_c0_seq1 2027 2030 +
Chr2	stalkie_big_nohaplotig	CDS	152064973	152065879	.	+	0	Parent=comp159375_c0_seq1.mrna1;Target=comp159375_c0_seq1 249 1155 +
Chr2	stalkie_big_nohaplotig	CDS	152119602	152119792	.	+	2	Parent=comp159375_c0_seq1.mrna1;Target=comp159375_c0_seq1 1156 1346 +
Chr2	stalkie_big_nohaplotig	mRNA	152064964	152120251	.	+	.	ID=FBgn0008651.1.mrna1;geneID=FBgn0008651.1.path1;Name=FBgn0008651.1;Dir=sensecoverage=100.0;identity=99.7;matches=1439;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022757
Chr2	stalkie_big_nohaplotig	exon	152064964	152065879	99	+	.	Parent=FBgn0008651.1.mrna1;Target=FBgn0008651.1 1 916 +
Chr2	stalkie_big_nohaplotig	exon	152119602	152119780	100	+	.	Parent=FBgn0008651.1.mrna1;Target=FBgn0008651.1 917 1095 +
Chr2	stalkie_big_nohaplotig	exon	152119852	152119937	100	+	.	Parent=FBgn0008651.1.mrna1;Target=FBgn0008651.1 1096 1181 +
Chr2	stalkie_big_nohaplotig	exon	152119990	152120251	100	+	.	Parent=FBgn0008651.1.mrna1;Target=FBgn0008651.1 1182 1443 +
Chr2	stalkie_big_nohaplotig	CDS	152064964	152065879	.	+	0	Parent=FBgn0008651.1.mrna1;Target=FBgn0008651.1 1 916 +
Chr2	stalkie_big_nohaplotig	CDS	152119602	152119780	.	+	2	Parent=FBgn0008651.1.mrna1;Target=FBgn0008651.1 917 1095 +
Chr2	stalkie_big_nohaplotig	CDS	152119852	152119937	.	+	0	Parent=FBgn0008651.1.mrna1;Target=FBgn0008651.1 1096 1181 +
Chr2	stalkie_big_nohaplotig	CDS	152119990	152120251	.	+	1	Parent=FBgn0008651.1.mrna1;Target=FBgn0008651.1 1182 1443 +
Chr2	gffcl	locus	152144312	152148465	.	+	.	ID=RLOC_00022758;geneIDs=comp160466_c1_seq1.path1;transcripts=comp160466_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152144312	152148465	.	+	.	ID=comp160466_c1_seq1.mrna1;geneID=comp160466_c1_seq1.path1;Name=comp160466_c1_seq1;Dir=sensecoverage=100.0;identity=96.1;matches=3658;mismatches=78;indels=69;unknowns=0;Target=comp160466_c1_seq1 2145 2414 +;locus=RLOC_00022758
Chr2	stalkie_big_nohaplotig	exon	152144312	152145595	97	+	.	Parent=comp160466_c1_seq1.mrna1;Target=comp160466_c1_seq1 1 1287 +
Chr2	stalkie_big_nohaplotig	exon	152145918	152146673	98	+	.	Parent=comp160466_c1_seq1.mrna1;Target=comp160466_c1_seq1 1288 2037 +
Chr2	stalkie_big_nohaplotig	exon	152146732	152148465	94	+	.	Parent=comp160466_c1_seq1.mrna1;Target=comp160466_c1_seq1 2038 3767 +
Chr2	stalkie_big_nohaplotig	CDS	152146839	152147108	.	+	0	Parent=comp160466_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152200126	152645445	.	+	.	ID=comp149221_c1_seq1.mrna1;geneID=comp149221_c1_seq1.path1;Name=comp149221_c1_seq1;Dir=antisensecoverage=79.3;identity=95.2;matches=2138;mismatches=74;indels=33;unknowns=0;locus=RLOC_00022759
Chr2	stalkie_big_nohaplotig	exon	152200126	152200721	99	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 2746 3341 -
Chr2	stalkie_big_nohaplotig	exon	152200959	152201217	99	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 2487 2745 -
Chr2	stalkie_big_nohaplotig	exon	152201291	152201430	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 2347 2486 -
Chr2	stalkie_big_nohaplotig	exon	152201603	152202386	99	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1563 2346 -
Chr2	stalkie_big_nohaplotig	exon	152218211	152218217	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1556 1562 -
Chr2	stalkie_big_nohaplotig	exon	152219007	152219011	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1551 1555 -
Chr2	stalkie_big_nohaplotig	exon	152235111	152235122	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1468 1479 -
Chr2	stalkie_big_nohaplotig	exon	152246659	152246681	54	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1437 1467 -
Chr2	stalkie_big_nohaplotig	exon	152254656	152254661	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1431 1436 -
Chr2	stalkie_big_nohaplotig	exon	152262196	152262206	71	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1417 1430 -
Chr2	stalkie_big_nohaplotig	exon	152271685	152271724	44	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1364 1416 -
Chr2	stalkie_big_nohaplotig	exon	152273330	152273337	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1339 1346 -
Chr2	stalkie_big_nohaplotig	exon	152276489	152276493	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1295 1299 -
Chr2	stalkie_big_nohaplotig	exon	152277587	152277606	80	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1275 1294 -
Chr2	stalkie_big_nohaplotig	exon	152309216	152309223	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1266 1273 -
Chr2	stalkie_big_nohaplotig	exon	152309240	152309248	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1201 1209 -
Chr2	stalkie_big_nohaplotig	exon	152324121	152324128	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1193 1200 -
Chr2	stalkie_big_nohaplotig	exon	152330734	152330736	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1190 1192 -
Chr2	stalkie_big_nohaplotig	exon	152347299	152347301	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1187 1189 -
Chr2	stalkie_big_nohaplotig	exon	152365366	152365373	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1135 1142 -
Chr2	stalkie_big_nohaplotig	exon	152373686	152373708	66	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1110 1133 -
Chr2	stalkie_big_nohaplotig	exon	152387512	152387513	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1108 1109 -
Chr2	stalkie_big_nohaplotig	exon	152418603	152418610	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1056 1063 -
Chr2	stalkie_big_nohaplotig	exon	152418624	152418633	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1028 1037 -
Chr2	stalkie_big_nohaplotig	exon	152434340	152434341	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1025 1026 -
Chr2	stalkie_big_nohaplotig	exon	152443879	152443884	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1019 1024 -
Chr2	stalkie_big_nohaplotig	exon	152448450	152448456	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1012 1018 -
Chr2	stalkie_big_nohaplotig	exon	152449776	152449783	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1004 1011 -
Chr2	stalkie_big_nohaplotig	exon	152450490	152450500	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 993 1003 -
Chr2	stalkie_big_nohaplotig	exon	152451070	152451071	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 991 992 -
Chr2	stalkie_big_nohaplotig	exon	152480907	152480917	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 951 961 -
Chr2	stalkie_big_nohaplotig	exon	152489710	152489719	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 926 935 -
Chr2	stalkie_big_nohaplotig	exon	152491684	152491692	55	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 919 925 -
Chr2	stalkie_big_nohaplotig	exon	152514597	152514607	90	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 841 851 -
Chr2	stalkie_big_nohaplotig	exon	152543364	152543375	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 829 840 -
Chr2	stalkie_big_nohaplotig	exon	152567370	152567371	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 827 828 -
Chr2	stalkie_big_nohaplotig	exon	152569445	152569450	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 804 809 -
Chr2	stalkie_big_nohaplotig	exon	152577601	152577608	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 796 803 -
Chr2	stalkie_big_nohaplotig	exon	152583174	152583225	44	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 744 795 -
Chr2	stalkie_big_nohaplotig	exon	152592683	152592687	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 739 743 -
Chr2	stalkie_big_nohaplotig	exon	152593364	152593372	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 730 738 -
Chr2	stalkie_big_nohaplotig	exon	152596079	152596085	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 723 729 -
Chr2	stalkie_big_nohaplotig	exon	152603965	152603968	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 719 722 -
Chr2	stalkie_big_nohaplotig	exon	152606688	152606697	90	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 709 718 -
Chr2	stalkie_big_nohaplotig	exon	152608452	152608466	80	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 694 708 -
Chr2	stalkie_big_nohaplotig	exon	152645444	152645445	100	+	.	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 692 693 -
Chr2	stalkie_big_nohaplotig	CDS	152201004	152201217	.	+	0	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 2487 2700 .
Chr2	stalkie_big_nohaplotig	CDS	152201291	152201430	.	+	2	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 2347 2486 .
Chr2	stalkie_big_nohaplotig	CDS	152201603	152202386	.	+	0	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1563 2346 .
Chr2	stalkie_big_nohaplotig	CDS	152218211	152218217	.	+	2	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1556 1562 .
Chr2	stalkie_big_nohaplotig	CDS	152219007	152219011	.	+	1	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1551 1555 .
Chr2	stalkie_big_nohaplotig	CDS	152235111	152235122	.	+	2	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1468 1479 .
Chr2	stalkie_big_nohaplotig	CDS	152246659	152246681	.	+	2	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1437 1467 .
Chr2	stalkie_big_nohaplotig	CDS	152254656	152254661	.	+	0	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1431 1436 .
Chr2	stalkie_big_nohaplotig	CDS	152262196	152262206	.	+	0	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1417 1430 .
Chr2	stalkie_big_nohaplotig	CDS	152271685	152271724	.	+	1	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1364 1416 .
Chr2	stalkie_big_nohaplotig	CDS	152273330	152273337	.	+	0	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1339 1346 .
Chr2	stalkie_big_nohaplotig	CDS	152276489	152276493	.	+	1	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1295 1299 .
Chr2	stalkie_big_nohaplotig	CDS	152277587	152277606	.	+	2	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1275 1294 .
Chr2	stalkie_big_nohaplotig	CDS	152309216	152309223	.	+	0	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1266 1273 .
Chr2	stalkie_big_nohaplotig	CDS	152309240	152309248	.	+	1	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1201 1209 .
Chr2	stalkie_big_nohaplotig	CDS	152324121	152324128	.	+	1	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1193 1200 .
Chr2	stalkie_big_nohaplotig	CDS	152330734	152330736	.	+	2	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1190 1192 .
Chr2	stalkie_big_nohaplotig	CDS	152347299	152347301	.	+	2	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1187 1189 .
Chr2	stalkie_big_nohaplotig	CDS	152365366	152365373	.	+	2	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1135 1142 .
Chr2	stalkie_big_nohaplotig	CDS	152373686	152373708	.	+	0	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1110 1133 .
Chr2	stalkie_big_nohaplotig	CDS	152387512	152387513	.	+	1	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1108 1109 .
Chr2	stalkie_big_nohaplotig	CDS	152418603	152418610	.	+	2	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1056 1063 .
Chr2	stalkie_big_nohaplotig	CDS	152418624	152418633	.	+	0	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1028 1037 .
Chr2	stalkie_big_nohaplotig	CDS	152434340	152434341	.	+	2	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1025 1026 .
Chr2	stalkie_big_nohaplotig	CDS	152443879	152443884	.	+	0	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1019 1024 .
Chr2	stalkie_big_nohaplotig	CDS	152448450	152448456	.	+	0	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1012 1018 .
Chr2	stalkie_big_nohaplotig	CDS	152449776	152449783	.	+	2	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 1004 1011 .
Chr2	stalkie_big_nohaplotig	CDS	152450490	152450500	.	+	0	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 993 1003 .
Chr2	stalkie_big_nohaplotig	CDS	152451070	152451071	.	+	1	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 991 992 .
Chr2	stalkie_big_nohaplotig	CDS	152480907	152480917	.	+	2	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 951 961 .
Chr2	stalkie_big_nohaplotig	CDS	152489710	152489719	.	+	0	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 926 935 .
Chr2	stalkie_big_nohaplotig	CDS	152491684	152491692	.	+	2	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 919 925 .
Chr2	stalkie_big_nohaplotig	CDS	152514597	152514607	.	+	2	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 841 851 .
Chr2	stalkie_big_nohaplotig	CDS	152543364	152543375	.	+	0	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 829 840 .
Chr2	stalkie_big_nohaplotig	CDS	152567370	152567371	.	+	0	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 827 828 .
Chr2	stalkie_big_nohaplotig	CDS	152569445	152569450	.	+	1	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 804 809 .
Chr2	stalkie_big_nohaplotig	CDS	152577601	152577608	.	+	1	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 796 803 .
Chr2	stalkie_big_nohaplotig	CDS	152583174	152583225	.	+	2	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 744 795 .
Chr2	stalkie_big_nohaplotig	CDS	152592683	152592687	.	+	1	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 739 743 .
Chr2	stalkie_big_nohaplotig	CDS	152593364	152593372	.	+	2	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 730 738 .
Chr2	stalkie_big_nohaplotig	CDS	152596079	152596085	.	+	2	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 723 729 .
Chr2	stalkie_big_nohaplotig	CDS	152603965	152603968	.	+	1	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 719 722 .
Chr2	stalkie_big_nohaplotig	CDS	152606688	152606697	.	+	0	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 709 718 .
Chr2	stalkie_big_nohaplotig	CDS	152608452	152608466	.	+	2	Parent=comp149221_c1_seq1.mrna1;Target=comp149221_c1_seq1 694 708 .
Chr2	stalkie_big_nohaplotig	mRNA	152200989	152239435	.	+	.	ID=FBgn0002781.1.mrna1;geneID=FBgn0002781.1.path1;Name=FBgn0002781.1;Dir=sensecoverage=100.0;identity=99.7;matches=1370;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022759
Chr2	stalkie_big_nohaplotig	exon	152200989	152201217	99	+	.	Parent=FBgn0002781.1.mrna1;Target=FBgn0002781.1 1 229 +
Chr2	stalkie_big_nohaplotig	exon	152201291	152201430	100	+	.	Parent=FBgn0002781.1.mrna1;Target=FBgn0002781.1 230 369 +
Chr2	stalkie_big_nohaplotig	exon	152201603	152202386	99	+	.	Parent=FBgn0002781.1.mrna1;Target=FBgn0002781.1 370 1153 +
Chr2	stalkie_big_nohaplotig	exon	152239163	152239333	99	+	.	Parent=FBgn0002781.1.mrna1;Target=FBgn0002781.1 1154 1324 +
Chr2	stalkie_big_nohaplotig	exon	152239386	152239435	98	+	.	Parent=FBgn0002781.1.mrna1;Target=FBgn0002781.1 1325 1374 +
Chr2	stalkie_big_nohaplotig	CDS	152200989	152201217	.	+	0	Parent=FBgn0002781.1.mrna1;Target=FBgn0002781.1 1 229 +
Chr2	stalkie_big_nohaplotig	CDS	152201291	152201430	.	+	2	Parent=FBgn0002781.1.mrna1;Target=FBgn0002781.1 230 369 +
Chr2	stalkie_big_nohaplotig	CDS	152201603	152202386	.	+	0	Parent=FBgn0002781.1.mrna1;Target=FBgn0002781.1 370 1153 +
Chr2	stalkie_big_nohaplotig	CDS	152239163	152239333	.	+	2	Parent=FBgn0002781.1.mrna1;Target=FBgn0002781.1 1154 1324 +
Chr2	stalkie_big_nohaplotig	CDS	152239386	152239435	.	+	2	Parent=FBgn0002781.1.mrna1;Target=FBgn0002781.1 1325 1374 +
Chr2	stalkie_big_nohaplotig	mRNA	152202366	152203137	.	+	.	ID=comp156155_c0_seq1.mrna1;geneID=comp156155_c0_seq1.path1;Name=comp156155_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.8;matches=763;mismatches=6;indels=11;unknowns=0;Target=comp156155_c0_seq1 777 1 .;CDS_Target=comp156155_c0_seq1 506 435 .;locus=RLOC_00022759
Chr2	stalkie_big_nohaplotig	exon	152202366	152203137	97	+	.	Parent=comp156155_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152202794	152202865	.	+	0	Parent=comp156155_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152271598	153495360	.	+	.	ID=comp152544_c0_seq1.mrna1;geneID=comp152544_c0_seq1.path1;Name=comp152544_c0_seq1;Dir=indeterminatecoverage=70.8;identity=98.7;matches=232;mismatches=3;indels=0;unknowns=0;Target=comp152544_c0_seq1 77 3 .;locus=RLOC_00022759
Chr2	stalkie_big_nohaplotig	exon	152271598	152271789	98	+	.	Parent=comp152544_c0_seq1.mrna1;Target=comp152544_c0_seq1 192 1 .
Chr2	stalkie_big_nohaplotig	exon	153459055	153459056	100	+	.	Parent=comp152544_c0_seq1.mrna1;Target=comp152544_c0_seq1 194 193 .
Chr2	stalkie_big_nohaplotig	exon	153466659	153466665	100	+	.	Parent=comp152544_c0_seq1.mrna1;Target=comp152544_c0_seq1 201 195 .
Chr2	stalkie_big_nohaplotig	exon	153471878	153471883	100	+	.	Parent=comp152544_c0_seq1.mrna1;Target=comp152544_c0_seq1 207 202 .
Chr2	stalkie_big_nohaplotig	exon	153477790	153477796	100	+	.	Parent=comp152544_c0_seq1.mrna1;Target=comp152544_c0_seq1 214 208 .
Chr2	stalkie_big_nohaplotig	exon	153479342	153479348	100	+	.	Parent=comp152544_c0_seq1.mrna1;Target=comp152544_c0_seq1 221 215 .
Chr2	stalkie_big_nohaplotig	exon	153481317	153481320	100	+	.	Parent=comp152544_c0_seq1.mrna1;Target=comp152544_c0_seq1 225 222 .
Chr2	stalkie_big_nohaplotig	exon	153487543	153487544	100	+	.	Parent=comp152544_c0_seq1.mrna1;Target=comp152544_c0_seq1 227 226 .
Chr2	stalkie_big_nohaplotig	exon	153495353	153495360	100	+	.	Parent=comp152544_c0_seq1.mrna1;Target=comp152544_c0_seq1 235 228 .
Chr2	stalkie_big_nohaplotig	CDS	152271600	152271674	.	+	0	Parent=comp152544_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152346806	152347390	.	+	.	ID=comp146198_c0_seq1.mrna1;geneID=comp146198_c0_seq1.path1;Name=comp146198_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.7;matches=583;mismatches=2;indels=0;unknowns=0;Target=comp146198_c0_seq1 587 3 .;CDS_Target=comp146198_c0_seq1 150 4 .;locus=RLOC_00022759
Chr2	stalkie_big_nohaplotig	exon	152346806	152347390	99	+	.	Parent=comp146198_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152346807	152346953	.	+	0	Parent=comp146198_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152450294	152451093	.	+	.	ID=FBgn0037235.1.mrna1;geneID=FBgn0037235.1.path1;Name=FBgn0037235.1;Dir=sensecoverage=100.0;identity=99.6;matches=687;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022759
Chr2	stalkie_big_nohaplotig	exon	152450294	152450437	100	+	.	Parent=FBgn0037235.1.mrna1;Target=FBgn0037235.1 1 144 +
Chr2	stalkie_big_nohaplotig	exon	152450491	152450578	100	+	.	Parent=FBgn0037235.1.mrna1;Target=FBgn0037235.1 145 232 +
Chr2	stalkie_big_nohaplotig	exon	152450636	152451093	99	+	.	Parent=FBgn0037235.1.mrna1;Target=FBgn0037235.1 233 690 +
Chr2	stalkie_big_nohaplotig	CDS	152450294	152450437	.	+	0	Parent=FBgn0037235.1.mrna1;Target=FBgn0037235.1 1 144 +
Chr2	stalkie_big_nohaplotig	CDS	152450491	152450578	.	+	0	Parent=FBgn0037235.1.mrna1;Target=FBgn0037235.1 145 232 +
Chr2	stalkie_big_nohaplotig	CDS	152450636	152451093	.	+	2	Parent=FBgn0037235.1.mrna1;Target=FBgn0037235.1 233 690 +
Chr2	stalkie_big_nohaplotig	mRNA	152488361	152494242	.	+	.	ID=FBgn0037238.mrna1;geneID=FBgn0037238.path1;Name=FBgn0037238;Dir=sensecoverage=100.0;identity=99.9;matches=1007;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022759
Chr2	stalkie_big_nohaplotig	exon	152488361	152494242	.	+	.	Parent=FBgn0037238.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152488361	152495696	.	+	.	ID=FBgn0037238.mrna1;geneID=FBgn0037238.path1;Name=FBgn0037238;Dir=sensecoverage=99.3;identity=99.8;matches=957;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022759
Chr2	stalkie_big_nohaplotig	exon	152488361	152488387	100	+	.	Parent=FBgn0037238.mrna1;Target=FBgn0037238 1 27 +
Chr2	stalkie_big_nohaplotig	exon	152493113	152493307	100	+	.	Parent=FBgn0037238.mrna1;Target=FBgn0037238 28 222 +
Chr2	stalkie_big_nohaplotig	exon	152493381	152493914	100	+	.	Parent=FBgn0037238.mrna1;Target=FBgn0037238 223 756 +
Chr2	stalkie_big_nohaplotig	exon	152493991	152494999	99	+	.	Parent=FBgn0037238.mrna1;Target=FBgn0037238 757 1008 +
Chr2	stalkie_big_nohaplotig	exon	152495507	152495696	99	+	.	Parent=FBgn0037238.mrna1;Target=FBgn0037238 770 959 +
Chr2	stalkie_big_nohaplotig	CDS	152488361	152488387	100	+	0	Parent=FBgn0037238.mrna1;Target=FBgn0037238 1 27 +
Chr2	stalkie_big_nohaplotig	CDS	152493113	152493307	100	+	0	Parent=FBgn0037238.mrna1;Target=FBgn0037238 28 222 +
Chr2	stalkie_big_nohaplotig	CDS	152493381	152493914	100	+	0	Parent=FBgn0037238.mrna1;Target=FBgn0037238 223 756 +
Chr2	stalkie_big_nohaplotig	CDS	152493991	152494242	99	+	0	Parent=FBgn0037238.mrna1;Target=FBgn0037238 757 1008 +
Chr2	stalkie_big_nohaplotig	CDS	152494231	152494999	99	+	0	Parent=FBgn0037238.mrna1;Target=FBgn0037238 1 769 +
Chr2	stalkie_big_nohaplotig	CDS	152495507	152495694	99	+	1	Parent=FBgn0037238.mrna1;Target=FBgn0037238 770 957 +
Chr2	stalkie_big_nohaplotig	mRNA	152541804	152547338	.	+	.	ID=FBgn0039559.1.mrna1;geneID=FBgn0039559.1.path1;Name=FBgn0039559.1;Dir=sensecoverage=100.0;identity=99.5;matches=4968;mismatches=24;indels=0;unknowns=0;locus=RLOC_00022759
Chr2	stalkie_big_nohaplotig	exon	152541804	152541864	100	+	.	Parent=FBgn0039559.1.mrna1;Target=FBgn0039559.1 1 61 +
Chr2	stalkie_big_nohaplotig	exon	152541922	152542113	98	+	.	Parent=FBgn0039559.1.mrna1;Target=FBgn0039559.1 62 253 +
Chr2	stalkie_big_nohaplotig	exon	152542167	152542259	100	+	.	Parent=FBgn0039559.1.mrna1;Target=FBgn0039559.1 254 346 +
Chr2	stalkie_big_nohaplotig	exon	152542332	152544258	99	+	.	Parent=FBgn0039559.1.mrna1;Target=FBgn0039559.1 347 2273 +
Chr2	stalkie_big_nohaplotig	exon	152544382	152546198	99	+	.	Parent=FBgn0039559.1.mrna1;Target=FBgn0039559.1 2274 4090 +
Chr2	stalkie_big_nohaplotig	exon	152546267	152546922	98	+	.	Parent=FBgn0039559.1.mrna1;Target=FBgn0039559.1 4091 4746 +
Chr2	stalkie_big_nohaplotig	exon	152546979	152547104	100	+	.	Parent=FBgn0039559.1.mrna1;Target=FBgn0039559.1 4747 4872 +
Chr2	stalkie_big_nohaplotig	exon	152547219	152547338	100	+	.	Parent=FBgn0039559.1.mrna1;Target=FBgn0039559.1 4873 4992 +
Chr2	stalkie_big_nohaplotig	CDS	152541804	152541864	.	+	0	Parent=FBgn0039559.1.mrna1;Target=FBgn0039559.1 1 61 +
Chr2	stalkie_big_nohaplotig	CDS	152541922	152542113	.	+	2	Parent=FBgn0039559.1.mrna1;Target=FBgn0039559.1 62 253 +
Chr2	stalkie_big_nohaplotig	CDS	152542167	152542259	.	+	2	Parent=FBgn0039559.1.mrna1;Target=FBgn0039559.1 254 346 +
Chr2	stalkie_big_nohaplotig	CDS	152542332	152544258	.	+	2	Parent=FBgn0039559.1.mrna1;Target=FBgn0039559.1 347 2273 +
Chr2	stalkie_big_nohaplotig	CDS	152544382	152546198	.	+	1	Parent=FBgn0039559.1.mrna1;Target=FBgn0039559.1 2274 4090 +
Chr2	stalkie_big_nohaplotig	CDS	152546267	152546922	.	+	2	Parent=FBgn0039559.1.mrna1;Target=FBgn0039559.1 4091 4746 +
Chr2	stalkie_big_nohaplotig	CDS	152546979	152547104	.	+	0	Parent=FBgn0039559.1.mrna1;Target=FBgn0039559.1 4747 4872 +
Chr2	stalkie_big_nohaplotig	CDS	152547219	152547338	.	+	0	Parent=FBgn0039559.1.mrna1;Target=FBgn0039559.1 4873 4992 +
Chr2	stalkie_big_nohaplotig	mRNA	152569048	152574097	.	+	.	ID=FBgn0039227.1.mrna1;geneID=FBgn0039227.1.path1;Name=FBgn0039227.1;Dir=sensecoverage=100.0;identity=99.6;matches=4893;mismatches=21;indels=0;unknowns=0;locus=RLOC_00022759
Chr2	stalkie_big_nohaplotig	exon	152569048	152570044	100	+	.	Parent=FBgn0039227.1.mrna1;Target=FBgn0039227.1 1 997 +
Chr2	stalkie_big_nohaplotig	exon	152570116	152573136	99	+	.	Parent=FBgn0039227.1.mrna1;Target=FBgn0039227.1 998 4018 +
Chr2	stalkie_big_nohaplotig	exon	152573202	152574097	99	+	.	Parent=FBgn0039227.1.mrna1;Target=FBgn0039227.1 4019 4914 +
Chr2	stalkie_big_nohaplotig	CDS	152569048	152570044	.	+	0	Parent=FBgn0039227.1.mrna1;Target=FBgn0039227.1 1 997 +
Chr2	stalkie_big_nohaplotig	CDS	152570116	152573136	.	+	2	Parent=FBgn0039227.1.mrna1;Target=FBgn0039227.1 998 4018 +
Chr2	stalkie_big_nohaplotig	CDS	152573202	152574097	.	+	2	Parent=FBgn0039227.1.mrna1;Target=FBgn0039227.1 4019 4914 +
Chr2	gffcl	locus	152206098	152206562	.	+	.	ID=RLOC_00022760;geneIDs=comp151946_c0_seq1.path1;transcripts=comp151946_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152206098	152206562	.	+	.	ID=comp151946_c0_seq1.mrna1;geneID=comp151946_c0_seq1.path1;Name=comp151946_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.8;matches=455;mismatches=10;indels=0;unknowns=0;Target=comp151946_c0_seq1 465 1 .;CDS_Target=comp151946_c0_seq1 193 152 .;locus=RLOC_00022760
Chr2	stalkie_big_nohaplotig	exon	152206098	152206562	97	+	.	Parent=comp151946_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152206249	152206290	.	+	0	Parent=comp151946_c0_seq1.mrna1
Chr2	gffcl	locus	152209782	152210752	.	+	.	ID=RLOC_00022761;geneIDs=comp151929_c0_seq1.path1;transcripts=comp151929_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152209782	152210752	.	+	.	ID=comp151929_c0_seq1.mrna1;geneID=comp151929_c0_seq1.path1;Name=comp151929_c0_seq1;Dir=sensecoverage=100.0;identity=98.9;matches=888;mismatches=10;indels=0;unknowns=0;Target=comp151929_c0_seq1 603 839 +;locus=RLOC_00022761
Chr2	stalkie_big_nohaplotig	exon	152209782	152210092	99	+	.	Parent=comp151929_c0_seq1.mrna1;Target=comp151929_c0_seq1 1 311 +
Chr2	stalkie_big_nohaplotig	exon	152210166	152210752	98	+	.	Parent=comp151929_c0_seq1.mrna1;Target=comp151929_c0_seq1 312 898 +
Chr2	stalkie_big_nohaplotig	CDS	152210457	152210693	.	+	0	Parent=comp151929_c0_seq1.mrna1
Chr2	gffcl	locus	152213037	152213589	.	+	.	ID=RLOC_00022762;geneIDs=comp207374_c0_seq1.path1;transcripts=comp207374_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152213037	152213589	.	+	.	ID=comp207374_c0_seq1.mrna1;geneID=comp207374_c0_seq1.path1;Name=comp207374_c0_seq1;Dir=indeterminatecoverage=96.0;identity=98.9;matches=553;mismatches=0;indels=6;unknowns=0;Target=comp207374_c0_seq1 561 3 .;CDS_Target=comp207374_c0_seq1 384 298 .;locus=RLOC_00022762
Chr2	stalkie_big_nohaplotig	exon	152213037	152213589	98	+	.	Parent=comp207374_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152213332	152213412	.	+	0	Parent=comp207374_c0_seq1.mrna1
Chr2	gffcl	locus	152213935	152214282	.	-	.	ID=RLOC_00022763;geneIDs=FBgn0261841.1.path1;transcripts=FBgn0261841.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152213935	152214282	.	-	.	ID=FBgn0261841.1.mrna1;geneID=FBgn0261841.1.path1;Name=FBgn0261841.1;Dir=indeterminatecoverage=98.3;identity=99.1;matches=345;mismatches=3;indels=0;unknowns=0;Target=FBgn0261841.1 354 7 .;locus=RLOC_00022763
Chr2	stalkie_big_nohaplotig	exon	152213935	152214282	99	-	.	Parent=FBgn0261841.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152213935	152214282	.	-	0	Parent=FBgn0261841.1.mrna1
Chr2	gffcl	locus	152215828	152218500	.	-	.	ID=RLOC_00022764;geneIDs=comp162172_c1_seq1.path1;transcripts=comp162172_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152215828	152218500	.	-	.	ID=comp162172_c1_seq1.mrna1;geneID=comp162172_c1_seq1.path1;Name=comp162172_c1_seq1;Dir=sensecoverage=99.9;identity=98.9;matches=1852;mismatches=10;indels=11;unknowns=0;locus=RLOC_00022764
Chr2	stalkie_big_nohaplotig	exon	152215828	152216220	96	-	.	Parent=comp162172_c1_seq1.mrna1;Target=comp162172_c1_seq1 1474 1874 +
Chr2	stalkie_big_nohaplotig	exon	152216349	152216599	100	-	.	Parent=comp162172_c1_seq1.mrna1;Target=comp162172_c1_seq1 1223 1473 +
Chr2	stalkie_big_nohaplotig	exon	152216975	152217045	100	-	.	Parent=comp162172_c1_seq1.mrna1;Target=comp162172_c1_seq1 1152 1222 +
Chr2	stalkie_big_nohaplotig	exon	152217105	152217360	100	-	.	Parent=comp162172_c1_seq1.mrna1;Target=comp162172_c1_seq1 896 1151 +
Chr2	stalkie_big_nohaplotig	exon	152217548	152217982	100	-	.	Parent=comp162172_c1_seq1.mrna1;Target=comp162172_c1_seq1 461 895 +
Chr2	stalkie_big_nohaplotig	exon	152218045	152218500	98	-	.	Parent=comp162172_c1_seq1.mrna1;Target=comp162172_c1_seq1 2 460 +
Chr2	stalkie_big_nohaplotig	CDS	152216358	152216599	.	-	2	Parent=comp162172_c1_seq1.mrna1;Target=comp162172_c1_seq1 1223 1464 +
Chr2	stalkie_big_nohaplotig	CDS	152216975	152217032	.	-	0	Parent=comp162172_c1_seq1.mrna1;Target=comp162172_c1_seq1 1165 1222 +
Chr2	gffcl	locus	152218609	153928550	.	-	.	ID=RLOC_00022765;geneIDs=comp116054_c0_seq1.path1,comp154449_c0_seq1.path1,comp155565_c0_seq1.path1,comp158454_c0_seq1.path1;transcripts=comp155565_c0_seq1.mrna1,comp158454_c0_seq1.mrna1,comp116054_c0_seq1.mrna1,comp154449_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152218609	153928550	.	-	.	ID=comp155565_c0_seq1.mrna1;geneID=comp155565_c0_seq1.path1;Name=comp155565_c0_seq1;Dir=indeterminatecoverage=77.3;identity=95.5;matches=1622;mismatches=36;indels=40;unknowns=0;Target=comp155565_c0_seq1 195 88 .;locus=RLOC_00022765
Chr2	stalkie_big_nohaplotig	exon	152218609	152218618	100	-	.	Parent=comp155565_c0_seq1.mrna1;Target=comp155565_c0_seq1 1698 1689 .
Chr2	stalkie_big_nohaplotig	exon	152222561	152222563	100	-	.	Parent=comp155565_c0_seq1.mrna1;Target=comp155565_c0_seq1 1688 1686 .
Chr2	stalkie_big_nohaplotig	exon	152228064	152228084	41	-	.	Parent=comp155565_c0_seq1.mrna1;Target=comp155565_c0_seq1 1685 1650 .
Chr2	stalkie_big_nohaplotig	exon	152240166	152240177	75	-	.	Parent=comp155565_c0_seq1.mrna1;Target=comp155565_c0_seq1 1649 1638 .
Chr2	stalkie_big_nohaplotig	exon	152250658	152250695	52	-	.	Parent=comp155565_c0_seq1.mrna1;Target=comp155565_c0_seq1 1637 1588 .
Chr2	stalkie_big_nohaplotig	exon	152258199	152258210	100	-	.	Parent=comp155565_c0_seq1.mrna1;Target=comp155565_c0_seq1 1587 1576 .
Chr2	stalkie_big_nohaplotig	exon	152259366	152259368	100	-	.	Parent=comp155565_c0_seq1.mrna1;Target=comp155565_c0_seq1 1575 1573 .
Chr2	stalkie_big_nohaplotig	exon	152259896	152259897	100	-	.	Parent=comp155565_c0_seq1.mrna1;Target=comp155565_c0_seq1 1572 1571 .
Chr2	stalkie_big_nohaplotig	exon	152260184	152260189	100	-	.	Parent=comp155565_c0_seq1.mrna1;Target=comp155565_c0_seq1 1570 1565 .
Chr2	stalkie_big_nohaplotig	exon	152260334	152260337	100	-	.	Parent=comp155565_c0_seq1.mrna1;Target=comp155565_c0_seq1 1564 1561 .
Chr2	stalkie_big_nohaplotig	exon	153927004	153928550	98	-	.	Parent=comp155565_c0_seq1.mrna1;Target=comp155565_c0_seq1 1560 1 .
Chr2	stalkie_big_nohaplotig	CDS	153928356	153928463	.	-	0	Parent=comp155565_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152226821	152228835	.	-	.	ID=comp158454_c0_seq1.mrna1;geneID=comp158454_c0_seq1.path1;Name=comp158454_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.9;matches=2013;mismatches=2;indels=0;unknowns=0;Target=comp158454_c0_seq1 2038 24 .;CDS_Target=comp158454_c0_seq1 1008 772 .;locus=RLOC_00022765
Chr2	stalkie_big_nohaplotig	exon	152226821	152228835	99	-	.	Parent=comp158454_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152227851	152228087	.	-	0	Parent=comp158454_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152240050	152240471	.	-	.	ID=comp116054_c0_seq1.mrna1;geneID=comp116054_c0_seq1.path1;Name=comp116054_c0_seq1;Dir=indeterminatecoverage=96.7;identity=98.1;matches=414;mismatches=1;indels=7;unknowns=0;Target=comp116054_c0_seq1 429 15 .;CDS_Target=comp116054_c0_seq1 68 15 .;locus=RLOC_00022765
Chr2	stalkie_big_nohaplotig	exon	152240050	152240471	98	-	.	Parent=comp116054_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152240411	152240471	.	-	0	Parent=comp116054_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152260145	152261387	.	-	.	ID=comp154449_c0_seq1.mrna1;geneID=comp154449_c0_seq1.path1;Name=comp154449_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.4;matches=1085;mismatches=34;indels=7;unknowns=0;Target=comp154449_c0_seq1 401 342 .;locus=RLOC_00022765
Chr2	stalkie_big_nohaplotig	exon	152260145	152260222	98	-	.	Parent=comp154449_c0_seq1.mrna1;Target=comp154449_c0_seq1 1123 1046 .
Chr2	stalkie_big_nohaplotig	exon	152260344	152261387	96	-	.	Parent=comp154449_c0_seq1.mrna1;Target=comp154449_c0_seq1 1045 1 .
Chr2	stalkie_big_nohaplotig	CDS	152260985	152261046	.	-	0	Parent=comp154449_c0_seq1.mrna1
Chr2	gffcl	locus	152229788	152230018	.	-	.	ID=RLOC_00022766;geneIDs=comp163222_c2_seq1.path2;transcripts=comp163222_c2_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	152229788	152230018	.	-	.	ID=comp163222_c2_seq1.mrna2;geneID=comp163222_c2_seq1.path2;Name=comp163222_c2_seq1;Dir=indeterminatecoverage=5.6;identity=100.0;matches=231;mismatches=0;indels=0;unknowns=0;Target=comp163222_c2_seq1 4109 3879 .;locus=RLOC_00022766
Chr2	stalkie_big_nohaplotig	exon	152229788	152230018	100	-	.	Parent=comp163222_c2_seq1.mrna2
Chr2	gffcl	locus	152232669	152233073	.	+	.	ID=RLOC_00022767;geneIDs=AGAP003439.path1;transcripts=AGAP003439.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152232669	152233073	.	+	.	ID=AGAP003439.mrna1;geneID=AGAP003439.path1;Name=AGAP003439;Dir=indeterminatecoverage=100.0;identity=100.0;matches=405;mismatches=0;indels=0;unknowns=0;Target=AGAP003439 405 1 .;locus=RLOC_00022767
Chr2	stalkie_big_nohaplotig	exon	152232669	152233073	100	+	.	Parent=AGAP003439.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152232669	152233073	.	+	0	Parent=AGAP003439.mrna1
Chr2	gffcl	locus	152236633	152237131	.	+	.	ID=RLOC_00022768;geneIDs=comp107749_c0_seq1.path1;transcripts=comp107749_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152236633	152237131	.	+	.	ID=comp107749_c0_seq1.mrna1;geneID=comp107749_c0_seq1.path1;Name=comp107749_c0_seq1;Dir=antisensecoverage=92.7;identity=99.3;matches=303;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022768
Chr2	stalkie_big_nohaplotig	exon	152236633	152236736	99	+	.	Parent=comp107749_c0_seq1.mrna1;Target=comp107749_c0_seq1 203 306 -
Chr2	stalkie_big_nohaplotig	exon	152236931	152237131	99	+	.	Parent=comp107749_c0_seq1.mrna1;Target=comp107749_c0_seq1 2 202 -
Chr2	stalkie_big_nohaplotig	CDS	152236635	152236736	.	+	0	Parent=comp107749_c0_seq1.mrna1;Target=comp107749_c0_seq1 203 304 .
Chr2	stalkie_big_nohaplotig	CDS	152236931	152237113	.	+	0	Parent=comp107749_c0_seq1.mrna1;Target=comp107749_c0_seq1 20 202 .
Chr2	gffcl	locus	152237285	152237594	.	-	.	ID=RLOC_00022769;geneIDs=comp147032_c0_seq1.path1;transcripts=comp147032_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152237285	152237594	.	-	.	ID=comp147032_c0_seq1.mrna1;geneID=comp147032_c0_seq1.path1;Name=comp147032_c0_seq1;Dir=indeterminatecoverage=96.1;identity=79.1;matches=254;mismatches=7;indels=60;unknowns=0;Target=comp147032_c0_seq1 272 1 .;CDS_Target=comp147032_c0_seq1 109 68 .;locus=RLOC_00022769
Chr2	stalkie_big_nohaplotig	exon	152237285	152237594	79	-	.	Parent=comp147032_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152237437	152237527	.	-	0	Parent=comp147032_c0_seq1.mrna1
Chr2	gffcl	locus	152238000	152238644	.	+	.	ID=RLOC_00022770;geneIDs=comp135333_c0_seq1.path1;transcripts=comp135333_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152238000	152238644	.	+	.	ID=comp135333_c0_seq1.mrna1;geneID=comp135333_c0_seq1.path1;Name=comp135333_c0_seq1;Dir=sensecoverage=93.4;identity=99.8;matches=591;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022770
Chr2	stalkie_big_nohaplotig	exon	152238000	152238301	100	+	.	Parent=comp135333_c0_seq1.mrna1;Target=comp135333_c0_seq1 43 344 +
Chr2	stalkie_big_nohaplotig	exon	152238355	152238644	99	+	.	Parent=comp135333_c0_seq1.mrna1;Target=comp135333_c0_seq1 345 634 +
Chr2	stalkie_big_nohaplotig	CDS	152238103	152238301	.	+	0	Parent=comp135333_c0_seq1.mrna1;Target=comp135333_c0_seq1 146 344 +
Chr2	stalkie_big_nohaplotig	CDS	152238355	152238407	.	+	2	Parent=comp135333_c0_seq1.mrna1;Target=comp135333_c0_seq1 345 397 +
Chr2	gffcl	locus	152240586	152240843	.	+	.	ID=RLOC_00022771;geneIDs=Dv_FBgn0201647.1.path1;transcripts=Dv_FBgn0201647.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152240586	152240843	.	+	.	ID=Dv_FBgn0201647.1.mrna1;geneID=Dv_FBgn0201647.1.path1;Name=Dv_FBgn0201647.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=258;mismatches=0;indels=0;unknowns=0;Target=Dv_FBgn0201647.1 258 1 .;locus=RLOC_00022771
Chr2	stalkie_big_nohaplotig	exon	152240586	152240843	100	+	.	Parent=Dv_FBgn0201647.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152240586	152240843	.	+	0	Parent=Dv_FBgn0201647.1.mrna1
Chr2	gffcl	locus	152241047	152241438	.	+	.	ID=RLOC_00022772;geneIDs=comp773434_c0_seq1.path1;transcripts=comp773434_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152241047	152241438	.	+	.	ID=comp773434_c0_seq1.mrna1;geneID=comp773434_c0_seq1.path1;Name=comp773434_c0_seq1;Dir=indeterminatecoverage=95.8;identity=100.0;matches=392;mismatches=0;indels=0;unknowns=0;Target=comp773434_c0_seq1 409 18 .;CDS_Target=comp773434_c0_seq1 259 20 .;locus=RLOC_00022772
Chr2	stalkie_big_nohaplotig	exon	152241047	152241438	100	+	.	Parent=comp773434_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152241049	152241288	.	+	0	Parent=comp773434_c0_seq1.mrna1
Chr2	gffcl	locus	152258605	152258917	.	+	.	ID=RLOC_00022773;geneIDs=comp159581_c4_seq1.path1;transcripts=comp159581_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152258605	152258917	.	+	.	ID=comp159581_c4_seq1.mrna1;geneID=comp159581_c4_seq1.path1;Name=comp159581_c4_seq1;Dir=indeterminatecoverage=24.8;identity=98.7;matches=309;mismatches=4;indels=0;unknowns=0;Target=comp159581_c4_seq1 366 54 .;locus=RLOC_00022773
Chr2	stalkie_big_nohaplotig	exon	152258605	152258917	98	+	.	Parent=comp159581_c4_seq1.mrna1
Chr2	gffcl	locus	152264952	152265807	.	+	.	ID=RLOC_00022774;geneIDs=comp150854_c0_seq1.path2;transcripts=comp150854_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	152264952	152265807	.	+	.	ID=comp150854_c0_seq1.mrna2;geneID=comp150854_c0_seq1.path2;Name=comp150854_c0_seq1;Dir=indeterminatecoverage=90.9;identity=98.4;matches=843;mismatches=13;indels=1;unknowns=0;Target=comp150854_c0_seq1 943 87 .;CDS_Target=comp150854_c0_seq1 566 435 .;locus=RLOC_00022774
Chr2	stalkie_big_nohaplotig	exon	152264952	152265807	98	+	.	Parent=comp150854_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	152265300	152265431	.	+	0	Parent=comp150854_c0_seq1.mrna2
Chr2	gffcl	locus	152274011	152274342	.	-	.	ID=RLOC_00022775;geneIDs=comp169430_c1_seq1.path1;transcripts=comp169430_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152274011	152274342	.	-	.	ID=comp169430_c1_seq1.mrna1;geneID=comp169430_c1_seq1.path1;Name=comp169430_c1_seq1;Dir=indeterminatecoverage=99.4;identity=100.0;matches=332;mismatches=0;indels=0;unknowns=0;Target=comp169430_c1_seq1 334 3 .;CDS_Target=comp169430_c1_seq1 75 4 .;locus=RLOC_00022775
Chr2	stalkie_big_nohaplotig	exon	152274011	152274342	100	-	.	Parent=comp169430_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152274270	152274341	.	-	0	Parent=comp169430_c1_seq1.mrna1
Chr2	gffcl	locus	152300611	152302272	.	-	.	ID=RLOC_00022776;geneIDs=comp153892_c0_seq1.path1;transcripts=comp153892_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152300611	152302272	.	-	.	ID=comp153892_c0_seq1.mrna1;geneID=comp153892_c0_seq1.path1;Name=comp153892_c0_seq1;Dir=indeterminatecoverage=98.9;identity=95.7;matches=1597;mismatches=47;indels=24;unknowns=0;Target=comp153892_c0_seq1 1669 20 .;CDS_Target=comp153892_c0_seq1 1357 1235 .;locus=RLOC_00022776
Chr2	stalkie_big_nohaplotig	exon	152300611	152302272	95	-	.	Parent=comp153892_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152300923	152301063	.	-	0	Parent=comp153892_c0_seq1.mrna1
Chr2	gffcl	locus	152311890	152327673	.	+	.	ID=RLOC_00022777;geneIDs=FBgn0038880.1.path1;transcripts=FBgn0038880.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152311890	152327673	.	+	.	ID=FBgn0038880.1.mrna1;geneID=FBgn0038880.1.path1;Name=FBgn0038880.1;Dir=sensecoverage=100.0;identity=99.9;matches=2208;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022777
Chr2	stalkie_big_nohaplotig	exon	152311890	152312241	100	+	.	Parent=FBgn0038880.1.mrna1;Target=FBgn0038880.1 1 352 +
Chr2	stalkie_big_nohaplotig	exon	152313793	152314146	100	+	.	Parent=FBgn0038880.1.mrna1;Target=FBgn0038880.1 353 706 +
Chr2	stalkie_big_nohaplotig	exon	152316318	152316377	100	+	.	Parent=FBgn0038880.1.mrna1;Target=FBgn0038880.1 707 766 +
Chr2	stalkie_big_nohaplotig	exon	152323244	152323343	100	+	.	Parent=FBgn0038880.1.mrna1;Target=FBgn0038880.1 767 866 +
Chr2	stalkie_big_nohaplotig	exon	152325866	152326038	100	+	.	Parent=FBgn0038880.1.mrna1;Target=FBgn0038880.1 867 1039 +
Chr2	stalkie_big_nohaplotig	exon	152326127	152326402	100	+	.	Parent=FBgn0038880.1.mrna1;Target=FBgn0038880.1 1040 1315 +
Chr2	stalkie_big_nohaplotig	exon	152326592	152326766	99	+	.	Parent=FBgn0038880.1.mrna1;Target=FBgn0038880.1 1316 1490 +
Chr2	stalkie_big_nohaplotig	exon	152326885	152327396	99	+	.	Parent=FBgn0038880.1.mrna1;Target=FBgn0038880.1 1491 2002 +
Chr2	stalkie_big_nohaplotig	exon	152327465	152327673	100	+	.	Parent=FBgn0038880.1.mrna1;Target=FBgn0038880.1 2003 2211 +
Chr2	stalkie_big_nohaplotig	CDS	152311890	152312241	.	+	0	Parent=FBgn0038880.1.mrna1;Target=FBgn0038880.1 1 352 +
Chr2	stalkie_big_nohaplotig	CDS	152313793	152314146	.	+	2	Parent=FBgn0038880.1.mrna1;Target=FBgn0038880.1 353 706 +
Chr2	stalkie_big_nohaplotig	CDS	152316318	152316377	.	+	2	Parent=FBgn0038880.1.mrna1;Target=FBgn0038880.1 707 766 +
Chr2	stalkie_big_nohaplotig	CDS	152323244	152323343	.	+	2	Parent=FBgn0038880.1.mrna1;Target=FBgn0038880.1 767 866 +
Chr2	stalkie_big_nohaplotig	CDS	152325866	152326038	.	+	1	Parent=FBgn0038880.1.mrna1;Target=FBgn0038880.1 867 1039 +
Chr2	stalkie_big_nohaplotig	CDS	152326127	152326402	.	+	2	Parent=FBgn0038880.1.mrna1;Target=FBgn0038880.1 1040 1315 +
Chr2	stalkie_big_nohaplotig	CDS	152326592	152326766	.	+	2	Parent=FBgn0038880.1.mrna1;Target=FBgn0038880.1 1316 1490 +
Chr2	stalkie_big_nohaplotig	CDS	152326885	152327396	.	+	1	Parent=FBgn0038880.1.mrna1;Target=FBgn0038880.1 1491 2002 +
Chr2	stalkie_big_nohaplotig	CDS	152327465	152327673	.	+	2	Parent=FBgn0038880.1.mrna1;Target=FBgn0038880.1 2003 2211 +
Chr2	gffcl	locus	152320264	152320743	.	+	.	ID=RLOC_00022778;geneIDs=comp606929_c0_seq1.path1;transcripts=comp606929_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152320264	152320743	.	+	.	ID=comp606929_c0_seq1.mrna1;geneID=comp606929_c0_seq1.path1;Name=comp606929_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=478;mismatches=2;indels=0;unknowns=0;Target=comp606929_c0_seq1 480 1 .;CDS_Target=comp606929_c0_seq1 320 189 .;locus=RLOC_00022778
Chr2	stalkie_big_nohaplotig	exon	152320264	152320743	99	+	.	Parent=comp606929_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152320452	152320583	.	+	0	Parent=comp606929_c0_seq1.mrna1
Chr2	gffcl	locus	152323442	152324405	.	-	.	ID=RLOC_00022779;geneIDs=comp135910_c0_seq1.path1;transcripts=comp135910_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152323442	152324405	.	-	.	ID=comp135910_c0_seq1.mrna1;geneID=comp135910_c0_seq1.path1;Name=comp135910_c0_seq1;Dir=sensecoverage=99.5;identity=99.8;matches=811;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022779
Chr2	stalkie_big_nohaplotig	exon	152323442	152323747	100	-	.	Parent=comp135910_c0_seq1.mrna1;Target=comp135910_c0_seq1 508 813 +
Chr2	stalkie_big_nohaplotig	exon	152323834	152323970	99	-	.	Parent=comp135910_c0_seq1.mrna1;Target=comp135910_c0_seq1 371 507 +
Chr2	stalkie_big_nohaplotig	exon	152324036	152324405	99	-	.	Parent=comp135910_c0_seq1.mrna1;Target=comp135910_c0_seq1 1 370 +
Chr2	stalkie_big_nohaplotig	CDS	152323606	152323747	.	-	1	Parent=comp135910_c0_seq1.mrna1;Target=comp135910_c0_seq1 508 649 +
Chr2	stalkie_big_nohaplotig	CDS	152323834	152323970	.	-	0	Parent=comp135910_c0_seq1.mrna1;Target=comp135910_c0_seq1 371 507 +
Chr2	stalkie_big_nohaplotig	CDS	152324036	152324047	.	-	0	Parent=comp135910_c0_seq1.mrna1;Target=comp135910_c0_seq1 359 370 +
Chr2	gffcl	locus	152330765	152332290	.	+	.	ID=RLOC_00022780;geneIDs=FBgn0038877.1.path1;transcripts=FBgn0038877.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152330765	152332290	.	+	.	ID=FBgn0038877.1.mrna1;geneID=FBgn0038877.1.path1;Name=FBgn0038877.1;Dir=sensecoverage=100.0;identity=99.6;matches=950;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022780
Chr2	stalkie_big_nohaplotig	exon	152330765	152330948	100	+	.	Parent=FBgn0038877.1.mrna1;Target=FBgn0038877.1 1 184 +
Chr2	stalkie_big_nohaplotig	exon	152331114	152331462	99	+	.	Parent=FBgn0038877.1.mrna1;Target=FBgn0038877.1 185 533 +
Chr2	stalkie_big_nohaplotig	exon	152331522	152331636	99	+	.	Parent=FBgn0038877.1.mrna1;Target=FBgn0038877.1 534 648 +
Chr2	stalkie_big_nohaplotig	exon	152331916	152332085	100	+	.	Parent=FBgn0038877.1.mrna1;Target=FBgn0038877.1 649 818 +
Chr2	stalkie_big_nohaplotig	exon	152332155	152332290	100	+	.	Parent=FBgn0038877.1.mrna1;Target=FBgn0038877.1 819 954 +
Chr2	stalkie_big_nohaplotig	CDS	152330765	152330948	.	+	0	Parent=FBgn0038877.1.mrna1;Target=FBgn0038877.1 1 184 +
Chr2	stalkie_big_nohaplotig	CDS	152331114	152331462	.	+	2	Parent=FBgn0038877.1.mrna1;Target=FBgn0038877.1 185 533 +
Chr2	stalkie_big_nohaplotig	CDS	152331522	152331636	.	+	1	Parent=FBgn0038877.1.mrna1;Target=FBgn0038877.1 534 648 +
Chr2	stalkie_big_nohaplotig	CDS	152331916	152332085	.	+	0	Parent=FBgn0038877.1.mrna1;Target=FBgn0038877.1 649 818 +
Chr2	stalkie_big_nohaplotig	CDS	152332155	152332290	.	+	1	Parent=FBgn0038877.1.mrna1;Target=FBgn0038877.1 819 954 +
Chr2	gffcl	locus	152333188	152334024	.	-	.	ID=RLOC_00022781;geneIDs=FBgn0038876.1.path1;transcripts=FBgn0038876.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152333188	152334024	.	-	.	ID=FBgn0038876.1.mrna1;geneID=FBgn0038876.1.path1;Name=FBgn0038876.1;Dir=sensecoverage=100.0;identity=99.6;matches=777;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022781
Chr2	stalkie_big_nohaplotig	exon	152333188	152333643	100	-	.	Parent=FBgn0038876.1.mrna1;Target=FBgn0038876.1 325 780 +
Chr2	stalkie_big_nohaplotig	exon	152333701	152334024	99	-	.	Parent=FBgn0038876.1.mrna1;Target=FBgn0038876.1 1 324 +
Chr2	stalkie_big_nohaplotig	CDS	152333188	152333643	.	-	0	Parent=FBgn0038876.1.mrna1;Target=FBgn0038876.1 325 780 +
Chr2	stalkie_big_nohaplotig	CDS	152333701	152334024	.	-	0	Parent=FBgn0038876.1.mrna1;Target=FBgn0038876.1 1 324 +
Chr2	gffcl	locus	152334645	152335131	.	+	.	ID=RLOC_00022782;geneIDs=FBgn0043012.1.path1;transcripts=FBgn0043012.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152334645	152335131	.	+	.	ID=FBgn0043012.1.mrna1;geneID=FBgn0043012.1.path1;Name=FBgn0043012.1;Dir=sensecoverage=98.8;identity=99.8;matches=423;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022782
Chr2	stalkie_big_nohaplotig	exon	152334645	152334795	100	+	.	Parent=FBgn0043012.1.mrna1;Target=FBgn0043012.1 6 156 +
Chr2	stalkie_big_nohaplotig	exon	152334859	152335131	99	+	.	Parent=FBgn0043012.1.mrna1;Target=FBgn0043012.1 157 429 +
Chr2	stalkie_big_nohaplotig	CDS	152334646	152334795	.	+	0	Parent=FBgn0043012.1.mrna1;Target=FBgn0043012.1 7 156 +
Chr2	stalkie_big_nohaplotig	CDS	152334859	152335131	.	+	0	Parent=FBgn0043012.1.mrna1;Target=FBgn0043012.1 157 429 +
Chr2	gffcl	locus	152337904	152342697	.	+	.	ID=RLOC_00022783;geneIDs=FBgn0016700.1.path1;transcripts=FBgn0016700.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152337904	152342697	.	+	.	ID=FBgn0016700.1.mrna1;geneID=FBgn0016700.1.path1;Name=FBgn0016700.1;Dir=sensecoverage=100.0;identity=99.8;matches=623;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022783
Chr2	stalkie_big_nohaplotig	exon	152337904	152337935	100	+	.	Parent=FBgn0016700.1.mrna1;Target=FBgn0016700.1 1 32 +
Chr2	stalkie_big_nohaplotig	exon	152341902	152342022	100	+	.	Parent=FBgn0016700.1.mrna1;Target=FBgn0016700.1 33 153 +
Chr2	stalkie_big_nohaplotig	exon	152342093	152342140	97	+	.	Parent=FBgn0016700.1.mrna1;Target=FBgn0016700.1 154 201 +
Chr2	stalkie_big_nohaplotig	exon	152342212	152342439	100	+	.	Parent=FBgn0016700.1.mrna1;Target=FBgn0016700.1 202 429 +
Chr2	stalkie_big_nohaplotig	exon	152342503	152342697	100	+	.	Parent=FBgn0016700.1.mrna1;Target=FBgn0016700.1 430 624 +
Chr2	stalkie_big_nohaplotig	CDS	152337904	152337935	.	+	0	Parent=FBgn0016700.1.mrna1;Target=FBgn0016700.1 1 32 +
Chr2	stalkie_big_nohaplotig	CDS	152341902	152342022	.	+	1	Parent=FBgn0016700.1.mrna1;Target=FBgn0016700.1 33 153 +
Chr2	stalkie_big_nohaplotig	CDS	152342093	152342140	.	+	0	Parent=FBgn0016700.1.mrna1;Target=FBgn0016700.1 154 201 +
Chr2	stalkie_big_nohaplotig	CDS	152342212	152342439	.	+	0	Parent=FBgn0016700.1.mrna1;Target=FBgn0016700.1 202 429 +
Chr2	stalkie_big_nohaplotig	CDS	152342503	152342697	.	+	0	Parent=FBgn0016700.1.mrna1;Target=FBgn0016700.1 430 624 +
Chr2	gffcl	locus	152343515	152346677	.	-	.	ID=RLOC_00022784;geneIDs=FBgn0038874.1.path1;transcripts=FBgn0038874.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152343515	152346677	.	-	.	ID=FBgn0038874.1.mrna1;geneID=FBgn0038874.1.path1;Name=FBgn0038874.1;Dir=sensecoverage=100.0;identity=99.9;matches=980;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022784
Chr2	stalkie_big_nohaplotig	exon	152343515	152344409	99	-	.	Parent=FBgn0038874.1.mrna1;Target=FBgn0038874.1 87 981 +
Chr2	stalkie_big_nohaplotig	exon	152346592	152346677	100	-	.	Parent=FBgn0038874.1.mrna1;Target=FBgn0038874.1 1 86 +
Chr2	stalkie_big_nohaplotig	CDS	152343515	152344409	.	-	1	Parent=FBgn0038874.1.mrna1;Target=FBgn0038874.1 87 981 +
Chr2	stalkie_big_nohaplotig	CDS	152346592	152346677	.	-	0	Parent=FBgn0038874.1.mrna1;Target=FBgn0038874.1 1 86 +
Chr2	gffcl	locus	152350423	152354779	.	-	.	ID=RLOC_00022785;geneIDs=FBgn0038874.2.path1,comp142194_c0_seq1.path1;transcripts=FBgn0038874.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152350758	152354779	.	-	.	ID=FBgn0038874.2.mrna1;geneID=FBgn0038874.2.path1;Name=FBgn0038874.2;Dir=sensecoverage=99.6;identity=99.9;matches=1858;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022785
Chr2	stalkie_big_nohaplotig	exon	152350758	152351624	100	-	.	Parent=FBgn0038874.2.mrna1;Target=FBgn0038874.2 993 1859 +
Chr2	stalkie_big_nohaplotig	exon	152352755	152352935	100	-	.	Parent=FBgn0038874.2.mrna1;Target=FBgn0038874.2 812 992 +
Chr2	stalkie_big_nohaplotig	exon	152353900	152354062	100	-	.	Parent=FBgn0038874.2.mrna1;Target=FBgn0038874.2 649 811 +
Chr2	stalkie_big_nohaplotig	exon	152354132	152354779	99	-	.	Parent=FBgn0038874.2.mrna1;Target=FBgn0038874.2 1 648 +
Chr2	stalkie_big_nohaplotig	CDS	152350760	152351624	.	-	1	Parent=FBgn0038874.2.mrna1;Target=FBgn0038874.2 993 1857 +
Chr2	stalkie_big_nohaplotig	CDS	152352755	152352935	.	-	2	Parent=FBgn0038874.2.mrna1;Target=FBgn0038874.2 812 992 +
Chr2	stalkie_big_nohaplotig	CDS	152353900	152354062	.	-	0	Parent=FBgn0038874.2.mrna1;Target=FBgn0038874.2 649 811 +
Chr2	stalkie_big_nohaplotig	CDS	152354132	152354779	.	-	0	Parent=FBgn0038874.2.mrna1;Target=FBgn0038874.2 1 648 +
Chr2	gffcl	locus	152406042	152410450	.	.	.	ID=RLOC_00022786;geneIDs=FBgn0000527.1.path1,comp151299_c0_seq1.path2;transcripts=FBgn0000527.1.mrna1,comp151299_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	152406042	152410450	.	+	.	ID=FBgn0000527.1.mrna1;geneID=FBgn0000527.1.path1;Name=FBgn0000527.1;Dir=sensecoverage=97.4;identity=99.9;matches=2648;mismatches=0;indels=2;unknowns=0;locus=RLOC_00022786
Chr2	stalkie_big_nohaplotig	exon	152406042	152406694	100	+	.	Parent=FBgn0000527.1.mrna1;Target=FBgn0000527.1 73 725 +
Chr2	stalkie_big_nohaplotig	exon	152406757	152406854	100	+	.	Parent=FBgn0000527.1.mrna1;Target=FBgn0000527.1 726 823 +
Chr2	stalkie_big_nohaplotig	exon	152406919	152407013	100	+	.	Parent=FBgn0000527.1.mrna1;Target=FBgn0000527.1 824 918 +
Chr2	stalkie_big_nohaplotig	exon	152407748	152408015	100	+	.	Parent=FBgn0000527.1.mrna1;Target=FBgn0000527.1 919 1186 +
Chr2	stalkie_big_nohaplotig	exon	152408074	152408241	100	+	.	Parent=FBgn0000527.1.mrna1;Target=FBgn0000527.1 1187 1354 +
Chr2	stalkie_big_nohaplotig	exon	152408406	152409174	99	+	.	Parent=FBgn0000527.1.mrna1;Target=FBgn0000527.1 1355 2123 +
Chr2	stalkie_big_nohaplotig	exon	152409233	152409323	100	+	.	Parent=FBgn0000527.1.mrna1;Target=FBgn0000527.1 2124 2214 +
Chr2	stalkie_big_nohaplotig	exon	152409833	152410008	100	+	.	Parent=FBgn0000527.1.mrna1;Target=FBgn0000527.1 2215 2390 +
Chr2	stalkie_big_nohaplotig	exon	152410064	152410247	100	+	.	Parent=FBgn0000527.1.mrna1;Target=FBgn0000527.1 2391 2574 +
Chr2	stalkie_big_nohaplotig	exon	152410304	152410450	100	+	.	Parent=FBgn0000527.1.mrna1;Target=FBgn0000527.1 2575 2721 +
Chr2	stalkie_big_nohaplotig	CDS	152406042	152406694	.	+	0	Parent=FBgn0000527.1.mrna1;Target=FBgn0000527.1 73 725 +
Chr2	stalkie_big_nohaplotig	CDS	152406757	152406854	.	+	1	Parent=FBgn0000527.1.mrna1;Target=FBgn0000527.1 726 823 +
Chr2	stalkie_big_nohaplotig	CDS	152406919	152407013	.	+	2	Parent=FBgn0000527.1.mrna1;Target=FBgn0000527.1 824 918 +
Chr2	stalkie_big_nohaplotig	CDS	152407748	152408015	.	+	0	Parent=FBgn0000527.1.mrna1;Target=FBgn0000527.1 919 1186 +
Chr2	stalkie_big_nohaplotig	CDS	152408074	152408241	.	+	2	Parent=FBgn0000527.1.mrna1;Target=FBgn0000527.1 1187 1354 +
Chr2	stalkie_big_nohaplotig	CDS	152408406	152409174	.	+	2	Parent=FBgn0000527.1.mrna1;Target=FBgn0000527.1 1355 2123 +
Chr2	stalkie_big_nohaplotig	CDS	152409233	152409323	.	+	1	Parent=FBgn0000527.1.mrna1;Target=FBgn0000527.1 2124 2214 +
Chr2	stalkie_big_nohaplotig	CDS	152409833	152410008	.	+	0	Parent=FBgn0000527.1.mrna1;Target=FBgn0000527.1 2215 2390 +
Chr2	stalkie_big_nohaplotig	CDS	152410064	152410247	.	+	1	Parent=FBgn0000527.1.mrna1;Target=FBgn0000527.1 2391 2574 +
Chr2	stalkie_big_nohaplotig	CDS	152410304	152410450	.	+	0	Parent=FBgn0000527.1.mrna1;Target=FBgn0000527.1 2575 2721 +
Chr2	stalkie_big_nohaplotig	mRNA	152409301	152409644	.	-	.	ID=comp151299_c0_seq1.mrna2;geneID=comp151299_c0_seq1.path2;Name=comp151299_c0_seq1;Dir=indeterminatecoverage=73.0;identity=99.1;matches=341;mismatches=3;indels=0;unknowns=0;Target=comp151299_c0_seq1 471 128 .;CDS_Target=comp151299_c0_seq1 144 128 .;locus=RLOC_00022786
Chr2	stalkie_big_nohaplotig	exon	152409301	152409644	99	-	.	Parent=comp151299_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	152409628	152409644	.	-	1	Parent=comp151299_c0_seq1.mrna2
Chr2	gffcl	locus	152412066	152416543	.	-	.	ID=RLOC_00022787;geneIDs=FBgn0038872.1.path1;transcripts=FBgn0038872.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152412066	152416543	.	-	.	ID=FBgn0038872.1.mrna1;geneID=FBgn0038872.1.path1;Name=FBgn0038872.1;Dir=sensecoverage=100.0;identity=99.6;matches=3608;mismatches=16;indels=0;unknowns=0;locus=RLOC_00022787
Chr2	stalkie_big_nohaplotig	exon	152412066	152412236	99	-	.	Parent=FBgn0038872.1.mrna1;Target=FBgn0038872.1 3454 3624 +
Chr2	stalkie_big_nohaplotig	exon	152412316	152412471	99	-	.	Parent=FBgn0038872.1.mrna1;Target=FBgn0038872.1 3298 3453 +
Chr2	stalkie_big_nohaplotig	exon	152412571	152412960	100	-	.	Parent=FBgn0038872.1.mrna1;Target=FBgn0038872.1 2908 3297 +
Chr2	stalkie_big_nohaplotig	exon	152413017	152414036	99	-	.	Parent=FBgn0038872.1.mrna1;Target=FBgn0038872.1 1888 2907 +
Chr2	stalkie_big_nohaplotig	exon	152414100	152415503	99	-	.	Parent=FBgn0038872.1.mrna1;Target=FBgn0038872.1 484 1887 +
Chr2	stalkie_big_nohaplotig	exon	152415596	152415850	99	-	.	Parent=FBgn0038872.1.mrna1;Target=FBgn0038872.1 229 483 +
Chr2	stalkie_big_nohaplotig	exon	152416316	152416543	100	-	.	Parent=FBgn0038872.1.mrna1;Target=FBgn0038872.1 1 228 +
Chr2	stalkie_big_nohaplotig	CDS	152412066	152412236	.	-	0	Parent=FBgn0038872.1.mrna1;Target=FBgn0038872.1 3454 3624 +
Chr2	stalkie_big_nohaplotig	CDS	152412316	152412471	.	-	0	Parent=FBgn0038872.1.mrna1;Target=FBgn0038872.1 3298 3453 +
Chr2	stalkie_big_nohaplotig	CDS	152412571	152412960	.	-	0	Parent=FBgn0038872.1.mrna1;Target=FBgn0038872.1 2908 3297 +
Chr2	stalkie_big_nohaplotig	CDS	152413017	152414036	.	-	0	Parent=FBgn0038872.1.mrna1;Target=FBgn0038872.1 1888 2907 +
Chr2	stalkie_big_nohaplotig	CDS	152414100	152415503	.	-	0	Parent=FBgn0038872.1.mrna1;Target=FBgn0038872.1 484 1887 +
Chr2	stalkie_big_nohaplotig	CDS	152415596	152415850	.	-	0	Parent=FBgn0038872.1.mrna1;Target=FBgn0038872.1 229 483 +
Chr2	stalkie_big_nohaplotig	CDS	152416316	152416543	.	-	0	Parent=FBgn0038872.1.mrna1;Target=FBgn0038872.1 1 228 +
Chr2	gffcl	locus	152417507	152417955	.	+	.	ID=RLOC_00022788;geneIDs=FBgn0038871.1.path1;transcripts=FBgn0038871.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152417507	152417955	.	+	.	ID=FBgn0038871.1.mrna1;geneID=FBgn0038871.1.path1;Name=FBgn0038871.1;Dir=sensecoverage=99.0;identity=99.2;matches=386;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022788
Chr2	stalkie_big_nohaplotig	exon	152417507	152417783	98	+	.	Parent=FBgn0038871.1.mrna1;Target=FBgn0038871.1 1 277 +
Chr2	stalkie_big_nohaplotig	exon	152417844	152417955	100	+	.	Parent=FBgn0038871.1.mrna1;Target=FBgn0038871.1 278 389 +
Chr2	stalkie_big_nohaplotig	CDS	152417507	152417783	.	+	0	Parent=FBgn0038871.1.mrna1;Target=FBgn0038871.1 1 277 +
Chr2	stalkie_big_nohaplotig	CDS	152417844	152417953	.	+	2	Parent=FBgn0038871.1.mrna1;Target=FBgn0038871.1 278 387 +
Chr2	gffcl	locus	152418576	152422831	.	-	.	ID=RLOC_00022789;geneIDs=FBgn0038870.1.path1;transcripts=FBgn0038870.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152418576	152422831	.	-	.	ID=FBgn0038870.1.mrna1;geneID=FBgn0038870.1.path1;Name=FBgn0038870.1;Dir=sensecoverage=100.0;identity=99.4;matches=3162;mismatches=18;indels=0;unknowns=0;locus=RLOC_00022789
Chr2	stalkie_big_nohaplotig	exon	152418576	152419295	99	-	.	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 2461 3180 +
Chr2	stalkie_big_nohaplotig	exon	152419667	152419752	100	-	.	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 2375 2460 +
Chr2	stalkie_big_nohaplotig	exon	152419817	152420229	99	-	.	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 1962 2374 +
Chr2	stalkie_big_nohaplotig	exon	152420290	152420360	100	-	.	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 1891 1961 +
Chr2	stalkie_big_nohaplotig	exon	152420428	152421206	99	-	.	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 1112 1890 +
Chr2	stalkie_big_nohaplotig	exon	152421264	152421349	100	-	.	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 1026 1111 +
Chr2	stalkie_big_nohaplotig	exon	152421408	152421519	99	-	.	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 914 1025 +
Chr2	stalkie_big_nohaplotig	exon	152421605	152422040	99	-	.	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 478 913 +
Chr2	stalkie_big_nohaplotig	exon	152422098	152422181	98	-	.	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 394 477 +
Chr2	stalkie_big_nohaplotig	exon	152422279	152422418	100	-	.	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 254 393 +
Chr2	stalkie_big_nohaplotig	exon	152422472	152422581	100	-	.	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 144 253 +
Chr2	stalkie_big_nohaplotig	exon	152422633	152422684	100	-	.	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 92 143 +
Chr2	stalkie_big_nohaplotig	exon	152422741	152422831	100	-	.	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 1 91 +
Chr2	stalkie_big_nohaplotig	CDS	152418576	152419295	.	-	0	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 2461 3180 +
Chr2	stalkie_big_nohaplotig	CDS	152419667	152419752	.	-	2	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 2375 2460 +
Chr2	stalkie_big_nohaplotig	CDS	152419817	152420229	.	-	1	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 1962 2374 +
Chr2	stalkie_big_nohaplotig	CDS	152420290	152420360	.	-	0	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 1891 1961 +
Chr2	stalkie_big_nohaplotig	CDS	152420428	152421206	.	-	2	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 1112 1890 +
Chr2	stalkie_big_nohaplotig	CDS	152421264	152421349	.	-	1	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 1026 1111 +
Chr2	stalkie_big_nohaplotig	CDS	152421408	152421519	.	-	2	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 914 1025 +
Chr2	stalkie_big_nohaplotig	CDS	152421605	152422040	.	-	0	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 478 913 +
Chr2	stalkie_big_nohaplotig	CDS	152422098	152422181	.	-	0	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 394 477 +
Chr2	stalkie_big_nohaplotig	CDS	152422279	152422418	.	-	2	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 254 393 +
Chr2	stalkie_big_nohaplotig	CDS	152422472	152422581	.	-	1	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 144 253 +
Chr2	stalkie_big_nohaplotig	CDS	152422633	152422684	.	-	2	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 92 143 +
Chr2	stalkie_big_nohaplotig	CDS	152422741	152422831	.	-	0	Parent=FBgn0038870.1.mrna1;Target=FBgn0038870.1 1 91 +
Chr2	gffcl	locus	152423515	152424528	.	+	.	ID=RLOC_00022790;geneIDs=FBgn0052939.1.path1;transcripts=FBgn0052939.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152423515	152424528	.	+	.	ID=FBgn0052939.1.mrna1;geneID=FBgn0052939.1.path1;Name=FBgn0052939.1;Dir=sensecoverage=100.0;identity=99.7;matches=778;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022790
Chr2	stalkie_big_nohaplotig	exon	152423515	152423673	100	+	.	Parent=FBgn0052939.1.mrna1;Target=FBgn0052939.1 1 159 +
Chr2	stalkie_big_nohaplotig	exon	152423734	152423889	99	+	.	Parent=FBgn0052939.1.mrna1;Target=FBgn0052939.1 160 315 +
Chr2	stalkie_big_nohaplotig	exon	152423956	152424093	100	+	.	Parent=FBgn0052939.1.mrna1;Target=FBgn0052939.1 316 453 +
Chr2	stalkie_big_nohaplotig	exon	152424147	152424361	99	+	.	Parent=FBgn0052939.1.mrna1;Target=FBgn0052939.1 454 668 +
Chr2	stalkie_big_nohaplotig	exon	152424417	152424528	100	+	.	Parent=FBgn0052939.1.mrna1;Target=FBgn0052939.1 669 780 +
Chr2	stalkie_big_nohaplotig	CDS	152423515	152423673	.	+	0	Parent=FBgn0052939.1.mrna1;Target=FBgn0052939.1 1 159 +
Chr2	stalkie_big_nohaplotig	CDS	152423734	152423889	.	+	0	Parent=FBgn0052939.1.mrna1;Target=FBgn0052939.1 160 315 +
Chr2	stalkie_big_nohaplotig	CDS	152423956	152424093	.	+	0	Parent=FBgn0052939.1.mrna1;Target=FBgn0052939.1 316 453 +
Chr2	stalkie_big_nohaplotig	CDS	152424147	152424361	.	+	0	Parent=FBgn0052939.1.mrna1;Target=FBgn0052939.1 454 668 +
Chr2	stalkie_big_nohaplotig	CDS	152424417	152424528	.	+	1	Parent=FBgn0052939.1.mrna1;Target=FBgn0052939.1 669 780 +
Chr2	gffcl	locus	152424768	152425486	.	.	.	ID=RLOC_00022791;geneIDs=comp135861_c0_seq1.path1,comp147623_c0_seq1.path1;transcripts=comp135861_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152425058	152425486	.	+	.	ID=comp135861_c0_seq1.mrna1;geneID=comp135861_c0_seq1.path1;Name=comp135861_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=426;mismatches=3;indels=0;unknowns=0;Target=comp135861_c0_seq1 429 1 .;CDS_Target=comp135861_c0_seq1 260 150 .;locus=RLOC_00022791
Chr2	stalkie_big_nohaplotig	exon	152425058	152425486	99	+	.	Parent=comp135861_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152425207	152425317	.	+	0	Parent=comp135861_c0_seq1.mrna1
Chr2	gffcl	locus	152426002	152431878	.	-	.	ID=RLOC_00022792;geneIDs=FBgn0051352.1.path1,comp117630_c0_seq1.path1;transcripts=FBgn0051352.1.mrna1,comp117630_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152426002	152431878	.	-	.	ID=FBgn0051352.1.mrna1;geneID=FBgn0051352.1.path1;Name=FBgn0051352.1;Dir=sensecoverage=99.1;identity=99.8;matches=2373;mismatches=5;indels=0;unknowns=0;locus=RLOC_00022792
Chr2	stalkie_big_nohaplotig	exon	152426002	152426112	100	-	.	Parent=FBgn0051352.1.mrna1;Target=FBgn0051352.1 2290 2400 +
Chr2	stalkie_big_nohaplotig	exon	152426168	152426368	99	-	.	Parent=FBgn0051352.1.mrna1;Target=FBgn0051352.1 2089 2289 +
Chr2	stalkie_big_nohaplotig	exon	152426430	152426470	100	-	.	Parent=FBgn0051352.1.mrna1;Target=FBgn0051352.1 2048 2088 +
Chr2	stalkie_big_nohaplotig	exon	152426533	152426599	100	-	.	Parent=FBgn0051352.1.mrna1;Target=FBgn0051352.1 1981 2047 +
Chr2	stalkie_big_nohaplotig	exon	152428780	152428868	100	-	.	Parent=FBgn0051352.1.mrna1;Target=FBgn0051352.1 1892 1980 +
Chr2	stalkie_big_nohaplotig	exon	152429308	152429447	100	-	.	Parent=FBgn0051352.1.mrna1;Target=FBgn0051352.1 1752 1891 +
Chr2	stalkie_big_nohaplotig	exon	152429513	152429686	100	-	.	Parent=FBgn0051352.1.mrna1;Target=FBgn0051352.1 1578 1751 +
Chr2	stalkie_big_nohaplotig	exon	152429747	152430270	99	-	.	Parent=FBgn0051352.1.mrna1;Target=FBgn0051352.1 1054 1577 +
Chr2	stalkie_big_nohaplotig	exon	152430450	152430506	100	-	.	Parent=FBgn0051352.1.mrna1;Target=FBgn0051352.1 997 1053 +
Chr2	stalkie_big_nohaplotig	exon	152430844	152431506	99	-	.	Parent=FBgn0051352.1.mrna1;Target=FBgn0051352.1 334 996 +
Chr2	stalkie_big_nohaplotig	exon	152431568	152431878	100	-	.	Parent=FBgn0051352.1.mrna1;Target=FBgn0051352.1 23 333 +
Chr2	stalkie_big_nohaplotig	CDS	152426002	152426112	.	-	0	Parent=FBgn0051352.1.mrna1;Target=FBgn0051352.1 2290 2400 +
Chr2	stalkie_big_nohaplotig	CDS	152426168	152426368	.	-	0	Parent=FBgn0051352.1.mrna1;Target=FBgn0051352.1 2089 2289 +
Chr2	stalkie_big_nohaplotig	CDS	152426430	152426470	.	-	2	Parent=FBgn0051352.1.mrna1;Target=FBgn0051352.1 2048 2088 +
Chr2	stalkie_big_nohaplotig	CDS	152426533	152426599	.	-	0	Parent=FBgn0051352.1.mrna1;Target=FBgn0051352.1 1981 2047 +
Chr2	stalkie_big_nohaplotig	CDS	152428780	152428868	.	-	2	Parent=FBgn0051352.1.mrna1;Target=FBgn0051352.1 1892 1980 +
Chr2	stalkie_big_nohaplotig	CDS	152429308	152429447	.	-	1	Parent=FBgn0051352.1.mrna1;Target=FBgn0051352.1 1752 1891 +
Chr2	stalkie_big_nohaplotig	CDS	152429513	152429686	.	-	1	Parent=FBgn0051352.1.mrna1;Target=FBgn0051352.1 1578 1751 +
Chr2	stalkie_big_nohaplotig	CDS	152429747	152430270	.	-	0	Parent=FBgn0051352.1.mrna1;Target=FBgn0051352.1 1054 1577 +
Chr2	stalkie_big_nohaplotig	CDS	152430450	152430506	.	-	0	Parent=FBgn0051352.1.mrna1;Target=FBgn0051352.1 997 1053 +
Chr2	stalkie_big_nohaplotig	CDS	152430844	152431506	.	-	0	Parent=FBgn0051352.1.mrna1;Target=FBgn0051352.1 334 996 +
Chr2	stalkie_big_nohaplotig	CDS	152431568	152431876	.	-	0	Parent=FBgn0051352.1.mrna1;Target=FBgn0051352.1 25 333 +
Chr2	stalkie_big_nohaplotig	mRNA	152428846	152429059	.	-	.	ID=comp117630_c0_seq1.mrna1;geneID=comp117630_c0_seq1.path1;Name=comp117630_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=209;mismatches=5;indels=0;unknowns=0;Target=comp117630_c0_seq1 214 1 .;CDS_Target=comp117630_c0_seq1 111 34 .;locus=RLOC_00022792
Chr2	stalkie_big_nohaplotig	exon	152428846	152429059	97	-	.	Parent=comp117630_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152428949	152429026	.	-	0	Parent=comp117630_c0_seq1.mrna1
Chr2	gffcl	locus	152444909	152448308	.	-	.	ID=RLOC_00022793;geneIDs=FBgn0037734.1.path1;transcripts=FBgn0037734.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152444909	152448308	.	-	.	ID=FBgn0037734.1.mrna1;geneID=FBgn0037734.1.path1;Name=FBgn0037734.1;Dir=sensecoverage=100.0;identity=99.9;matches=2403;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022793
Chr2	stalkie_big_nohaplotig	exon	152444909	152444990	100	-	.	Parent=FBgn0037734.1.mrna1;Target=FBgn0037734.1 2325 2406 +
Chr2	stalkie_big_nohaplotig	exon	152445043	152445191	100	-	.	Parent=FBgn0037734.1.mrna1;Target=FBgn0037734.1 2176 2324 +
Chr2	stalkie_big_nohaplotig	exon	152445248	152445459	99	-	.	Parent=FBgn0037734.1.mrna1;Target=FBgn0037734.1 1964 2175 +
Chr2	stalkie_big_nohaplotig	exon	152445516	152445760	100	-	.	Parent=FBgn0037734.1.mrna1;Target=FBgn0037734.1 1719 1963 +
Chr2	stalkie_big_nohaplotig	exon	152446346	152446964	99	-	.	Parent=FBgn0037734.1.mrna1;Target=FBgn0037734.1 1100 1718 +
Chr2	stalkie_big_nohaplotig	exon	152447031	152447138	100	-	.	Parent=FBgn0037734.1.mrna1;Target=FBgn0037734.1 992 1099 +
Chr2	stalkie_big_nohaplotig	exon	152447209	152447416	100	-	.	Parent=FBgn0037734.1.mrna1;Target=FBgn0037734.1 784 991 +
Chr2	stalkie_big_nohaplotig	exon	152447469	152448096	99	-	.	Parent=FBgn0037734.1.mrna1;Target=FBgn0037734.1 156 783 +
Chr2	stalkie_big_nohaplotig	exon	152448154	152448308	100	-	.	Parent=FBgn0037734.1.mrna1;Target=FBgn0037734.1 1 155 +
Chr2	stalkie_big_nohaplotig	CDS	152444909	152444990	.	-	1	Parent=FBgn0037734.1.mrna1;Target=FBgn0037734.1 2325 2406 +
Chr2	stalkie_big_nohaplotig	CDS	152445043	152445191	.	-	0	Parent=FBgn0037734.1.mrna1;Target=FBgn0037734.1 2176 2324 +
Chr2	stalkie_big_nohaplotig	CDS	152445248	152445459	.	-	2	Parent=FBgn0037734.1.mrna1;Target=FBgn0037734.1 1964 2175 +
Chr2	stalkie_big_nohaplotig	CDS	152445516	152445760	.	-	1	Parent=FBgn0037734.1.mrna1;Target=FBgn0037734.1 1719 1963 +
Chr2	stalkie_big_nohaplotig	CDS	152446346	152446964	.	-	2	Parent=FBgn0037734.1.mrna1;Target=FBgn0037734.1 1100 1718 +
Chr2	stalkie_big_nohaplotig	CDS	152447031	152447138	.	-	2	Parent=FBgn0037734.1.mrna1;Target=FBgn0037734.1 992 1099 +
Chr2	stalkie_big_nohaplotig	CDS	152447209	152447416	.	-	0	Parent=FBgn0037734.1.mrna1;Target=FBgn0037734.1 784 991 +
Chr2	stalkie_big_nohaplotig	CDS	152447469	152448096	.	-	1	Parent=FBgn0037734.1.mrna1;Target=FBgn0037734.1 156 783 +
Chr2	stalkie_big_nohaplotig	CDS	152448154	152448308	.	-	0	Parent=FBgn0037734.1.mrna1;Target=FBgn0037734.1 1 155 +
Chr2	gffcl	locus	152497166	152497657	.	-	.	ID=RLOC_00022794;geneIDs=comp114974_c0_seq1.path1;transcripts=comp114974_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152497166	152497657	.	-	.	ID=comp114974_c0_seq1.mrna1;geneID=comp114974_c0_seq1.path1;Name=comp114974_c0_seq1;Dir=indeterminatecoverage=96.9;identity=99.6;matches=490;mismatches=2;indels=0;unknowns=0;Target=comp114974_c0_seq1 492 1 .;CDS_Target=comp114974_c0_seq1 225 172 .;locus=RLOC_00022794
Chr2	stalkie_big_nohaplotig	exon	152497166	152497657	99	-	.	Parent=comp114974_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152497433	152497486	.	-	0	Parent=comp114974_c0_seq1.mrna1
Chr2	gffcl	locus	152498398	153023905	.	.	.	ID=RLOC_00022795;geneIDs=comp145420_c0_seq1.path1,comp155331_c0_seq1.path1;transcripts=comp145420_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152498653	153023905	.	-	.	ID=comp145420_c0_seq1.mrna1;geneID=comp145420_c0_seq1.path1;Name=comp145420_c0_seq1;Dir=indeterminatecoverage=93.9;identity=92.9;matches=908;mismatches=10;indels=59;unknowns=0;Target=comp145420_c0_seq1 1039 956 .;locus=RLOC_00022795
Chr2	stalkie_big_nohaplotig	exon	152498653	152499547	92	-	.	Parent=comp145420_c0_seq1.mrna1;Target=comp145420_c0_seq1 1040 87 .
Chr2	stalkie_big_nohaplotig	exon	153006375	153006380	100	-	.	Parent=comp145420_c0_seq1.mrna1;Target=comp145420_c0_seq1 86 81 .
Chr2	stalkie_big_nohaplotig	exon	153011837	153011842	100	-	.	Parent=comp145420_c0_seq1.mrna1;Target=comp145420_c0_seq1 80 75 .
Chr2	stalkie_big_nohaplotig	exon	153018795	153018799	100	-	.	Parent=comp145420_c0_seq1.mrna1;Target=comp145420_c0_seq1 74 70 .
Chr2	stalkie_big_nohaplotig	exon	153023900	153023905	100	-	.	Parent=comp145420_c0_seq1.mrna1;Target=comp145420_c0_seq1 69 64 .
Chr2	stalkie_big_nohaplotig	CDS	152498654	152498737	.	-	0	Parent=comp145420_c0_seq1.mrna1
Chr2	gffcl	locus	152499850	152500833	.	+	.	ID=RLOC_00022796;geneIDs=comp146837_c0_seq1.path1,comp172714_c0_seq1.path1;transcripts=comp146837_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152499850	152500411	.	+	.	ID=comp146837_c0_seq1.mrna1;geneID=comp146837_c0_seq1.path1;Name=comp146837_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=555;mismatches=5;indels=2;unknowns=0;Target=comp146837_c0_seq1 560 1 .;CDS_Target=comp146837_c0_seq1 375 313 .;locus=RLOC_00022796
Chr2	stalkie_big_nohaplotig	exon	152499850	152500411	98	+	.	Parent=comp146837_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152500164	152500226	.	+	0	Parent=comp146837_c0_seq1.mrna1
Chr2	gffcl	locus	152502380	152502767	.	-	.	ID=RLOC_00022797;geneIDs=comp146616_c0_seq1.path1;transcripts=comp146616_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152502380	152502767	.	-	.	ID=comp146616_c0_seq1.mrna1;geneID=comp146616_c0_seq1.path1;Name=comp146616_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=385;mismatches=2;indels=1;unknowns=0;Target=comp146616_c0_seq1 387 1 .;CDS_Target=comp146616_c0_seq1 115 2 .;locus=RLOC_00022797
Chr2	stalkie_big_nohaplotig	exon	152502380	152502767	99	-	.	Parent=comp146616_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152502653	152502766	.	-	0	Parent=comp146616_c0_seq1.mrna1
Chr2	gffcl	locus	152503426	152506558	.	+	.	ID=RLOC_00022798;geneIDs=FBgn0037239.1.path1;transcripts=FBgn0037239.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152503426	152506558	.	+	.	ID=FBgn0037239.1.mrna1;geneID=FBgn0037239.1.path1;Name=FBgn0037239.1;Dir=sensecoverage=100.0;identity=99.7;matches=981;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022798
Chr2	stalkie_big_nohaplotig	exon	152503426	152503759	99	+	.	Parent=FBgn0037239.1.mrna1;Target=FBgn0037239.1 1 334 +
Chr2	stalkie_big_nohaplotig	exon	152505731	152505848	100	+	.	Parent=FBgn0037239.1.mrna1;Target=FBgn0037239.1 335 452 +
Chr2	stalkie_big_nohaplotig	exon	152505904	152505979	100	+	.	Parent=FBgn0037239.1.mrna1;Target=FBgn0037239.1 453 528 +
Chr2	stalkie_big_nohaplotig	exon	152506036	152506121	100	+	.	Parent=FBgn0037239.1.mrna1;Target=FBgn0037239.1 529 614 +
Chr2	stalkie_big_nohaplotig	exon	152506189	152506558	99	+	.	Parent=FBgn0037239.1.mrna1;Target=FBgn0037239.1 615 984 +
Chr2	stalkie_big_nohaplotig	CDS	152503426	152503759	.	+	0	Parent=FBgn0037239.1.mrna1;Target=FBgn0037239.1 1 334 +
Chr2	stalkie_big_nohaplotig	CDS	152505731	152505848	.	+	2	Parent=FBgn0037239.1.mrna1;Target=FBgn0037239.1 335 452 +
Chr2	stalkie_big_nohaplotig	CDS	152505904	152505979	.	+	1	Parent=FBgn0037239.1.mrna1;Target=FBgn0037239.1 453 528 +
Chr2	stalkie_big_nohaplotig	CDS	152506036	152506121	.	+	0	Parent=FBgn0037239.1.mrna1;Target=FBgn0037239.1 529 614 +
Chr2	stalkie_big_nohaplotig	CDS	152506189	152506558	.	+	1	Parent=FBgn0037239.1.mrna1;Target=FBgn0037239.1 615 984 +
Chr2	gffcl	locus	152509531	152516407	.	+	.	ID=RLOC_00022799;geneIDs=FBgn0039561.1.path1;transcripts=FBgn0039561.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152509531	152516407	.	+	.	ID=FBgn0039561.1.mrna1;geneID=FBgn0039561.1.path1;Name=FBgn0039561.1;Dir=sensecoverage=100.0;identity=99.5;matches=1128;mismatches=5;indels=1;unknowns=0;locus=RLOC_00022799
Chr2	stalkie_big_nohaplotig	exon	152509531	152509695	99	+	.	Parent=FBgn0039561.1.mrna1;Target=FBgn0039561.1 1 165 +
Chr2	stalkie_big_nohaplotig	exon	152514738	152514826	100	+	.	Parent=FBgn0039561.1.mrna1;Target=FBgn0039561.1 166 254 +
Chr2	stalkie_big_nohaplotig	exon	152514912	152515036	100	+	.	Parent=FBgn0039561.1.mrna1;Target=FBgn0039561.1 255 379 +
Chr2	stalkie_big_nohaplotig	exon	152515115	152515350	99	+	.	Parent=FBgn0039561.1.mrna1;Target=FBgn0039561.1 380 615 +
Chr2	stalkie_big_nohaplotig	exon	152515414	152515575	98	+	.	Parent=FBgn0039561.1.mrna1;Target=FBgn0039561.1 616 777 +
Chr2	stalkie_big_nohaplotig	exon	152516052	152516407	99	+	.	Parent=FBgn0039561.1.mrna1;Target=FBgn0039561.1 778 1134 +
Chr2	stalkie_big_nohaplotig	CDS	152509531	152509695	.	+	0	Parent=FBgn0039561.1.mrna1;Target=FBgn0039561.1 1 165 +
Chr2	stalkie_big_nohaplotig	CDS	152514738	152514826	.	+	0	Parent=FBgn0039561.1.mrna1;Target=FBgn0039561.1 166 254 +
Chr2	stalkie_big_nohaplotig	CDS	152514912	152515036	.	+	1	Parent=FBgn0039561.1.mrna1;Target=FBgn0039561.1 255 379 +
Chr2	stalkie_big_nohaplotig	CDS	152515115	152515350	.	+	2	Parent=FBgn0039561.1.mrna1;Target=FBgn0039561.1 380 615 +
Chr2	stalkie_big_nohaplotig	CDS	152515414	152515575	.	+	0	Parent=FBgn0039561.1.mrna1;Target=FBgn0039561.1 616 777 +
Chr2	stalkie_big_nohaplotig	CDS	152516052	152516407	.	+	0	Parent=FBgn0039561.1.mrna1;Target=FBgn0039561.1 778 1134 +
Chr2	gffcl	locus	152524567	152528812	.	-	.	ID=RLOC_00022801;geneIDs=FBgn0031734.1.path1;transcripts=FBgn0031734.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152524567	152528812	.	-	.	ID=FBgn0031734.1.mrna1;geneID=FBgn0031734.1.path1;Name=FBgn0031734.1;Dir=sensecoverage=100.0;identity=99.9;matches=2161;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022801
Chr2	stalkie_big_nohaplotig	exon	152524567	152524775	100	-	.	Parent=FBgn0031734.1.mrna1;Target=FBgn0031734.1 1955 2163 +
Chr2	stalkie_big_nohaplotig	exon	152524833	152524919	100	-	.	Parent=FBgn0031734.1.mrna1;Target=FBgn0031734.1 1868 1954 +
Chr2	stalkie_big_nohaplotig	exon	152524989	152525254	100	-	.	Parent=FBgn0031734.1.mrna1;Target=FBgn0031734.1 1602 1867 +
Chr2	stalkie_big_nohaplotig	exon	152525313	152525499	100	-	.	Parent=FBgn0031734.1.mrna1;Target=FBgn0031734.1 1415 1601 +
Chr2	stalkie_big_nohaplotig	exon	152525577	152525754	100	-	.	Parent=FBgn0031734.1.mrna1;Target=FBgn0031734.1 1237 1414 +
Chr2	stalkie_big_nohaplotig	exon	152525828	152526059	100	-	.	Parent=FBgn0031734.1.mrna1;Target=FBgn0031734.1 1005 1236 +
Chr2	stalkie_big_nohaplotig	exon	152526190	152526566	100	-	.	Parent=FBgn0031734.1.mrna1;Target=FBgn0031734.1 628 1004 +
Chr2	stalkie_big_nohaplotig	exon	152526631	152526724	100	-	.	Parent=FBgn0031734.1.mrna1;Target=FBgn0031734.1 534 627 +
Chr2	stalkie_big_nohaplotig	exon	152527536	152527798	99	-	.	Parent=FBgn0031734.1.mrna1;Target=FBgn0031734.1 271 533 +
Chr2	stalkie_big_nohaplotig	exon	152528439	152528586	99	-	.	Parent=FBgn0031734.1.mrna1;Target=FBgn0031734.1 123 270 +
Chr2	stalkie_big_nohaplotig	exon	152528691	152528812	100	-	.	Parent=FBgn0031734.1.mrna1;Target=FBgn0031734.1 1 122 +
Chr2	stalkie_big_nohaplotig	CDS	152524567	152524775	.	-	2	Parent=FBgn0031734.1.mrna1;Target=FBgn0031734.1 1955 2163 +
Chr2	stalkie_big_nohaplotig	CDS	152524833	152524919	.	-	2	Parent=FBgn0031734.1.mrna1;Target=FBgn0031734.1 1868 1954 +
Chr2	stalkie_big_nohaplotig	CDS	152524989	152525254	.	-	1	Parent=FBgn0031734.1.mrna1;Target=FBgn0031734.1 1602 1867 +
Chr2	stalkie_big_nohaplotig	CDS	152525313	152525499	.	-	2	Parent=FBgn0031734.1.mrna1;Target=FBgn0031734.1 1415 1601 +
Chr2	stalkie_big_nohaplotig	CDS	152525577	152525754	.	-	0	Parent=FBgn0031734.1.mrna1;Target=FBgn0031734.1 1237 1414 +
Chr2	stalkie_big_nohaplotig	CDS	152525828	152526059	.	-	1	Parent=FBgn0031734.1.mrna1;Target=FBgn0031734.1 1005 1236 +
Chr2	stalkie_big_nohaplotig	CDS	152526190	152526566	.	-	0	Parent=FBgn0031734.1.mrna1;Target=FBgn0031734.1 628 1004 +
Chr2	stalkie_big_nohaplotig	CDS	152526631	152526724	.	-	1	Parent=FBgn0031734.1.mrna1;Target=FBgn0031734.1 534 627 +
Chr2	stalkie_big_nohaplotig	CDS	152527536	152527798	.	-	0	Parent=FBgn0031734.1.mrna1;Target=FBgn0031734.1 271 533 +
Chr2	stalkie_big_nohaplotig	CDS	152528439	152528586	.	-	1	Parent=FBgn0031734.1.mrna1;Target=FBgn0031734.1 123 270 +
Chr2	stalkie_big_nohaplotig	CDS	152528691	152528812	.	-	0	Parent=FBgn0031734.1.mrna1;Target=FBgn0031734.1 1 122 +
Chr2	gffcl	locus	152548121	152550386	.	-	.	ID=RLOC_00022802;geneIDs=FBgn0027579.1.path1;transcripts=FBgn0027579.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152548121	152550386	.	-	.	ID=FBgn0027579.1.mrna1;geneID=FBgn0027579.1.path1;Name=FBgn0027579.1;Dir=sensecoverage=100.0;identity=99.7;matches=1792;mismatches=5;indels=0;unknowns=0;locus=RLOC_00022802
Chr2	stalkie_big_nohaplotig	exon	152548121	152548314	100	-	.	Parent=FBgn0027579.1.mrna1;Target=FBgn0027579.1 1604 1797 +
Chr2	stalkie_big_nohaplotig	exon	152548449	152548740	99	-	.	Parent=FBgn0027579.1.mrna1;Target=FBgn0027579.1 1312 1603 +
Chr2	stalkie_big_nohaplotig	exon	152548801	152548971	100	-	.	Parent=FBgn0027579.1.mrna1;Target=FBgn0027579.1 1141 1311 +
Chr2	stalkie_big_nohaplotig	exon	152549037	152549221	99	-	.	Parent=FBgn0027579.1.mrna1;Target=FBgn0027579.1 956 1140 +
Chr2	stalkie_big_nohaplotig	exon	152549280	152549581	100	-	.	Parent=FBgn0027579.1.mrna1;Target=FBgn0027579.1 654 955 +
Chr2	stalkie_big_nohaplotig	exon	152549631	152549761	100	-	.	Parent=FBgn0027579.1.mrna1;Target=FBgn0027579.1 523 653 +
Chr2	stalkie_big_nohaplotig	exon	152549814	152550157	99	-	.	Parent=FBgn0027579.1.mrna1;Target=FBgn0027579.1 179 522 +
Chr2	stalkie_big_nohaplotig	exon	152550209	152550386	99	-	.	Parent=FBgn0027579.1.mrna1;Target=FBgn0027579.1 1 178 +
Chr2	stalkie_big_nohaplotig	CDS	152548121	152548314	.	-	2	Parent=FBgn0027579.1.mrna1;Target=FBgn0027579.1 1604 1797 +
Chr2	stalkie_big_nohaplotig	CDS	152548449	152548740	.	-	0	Parent=FBgn0027579.1.mrna1;Target=FBgn0027579.1 1312 1603 +
Chr2	stalkie_big_nohaplotig	CDS	152548801	152548971	.	-	0	Parent=FBgn0027579.1.mrna1;Target=FBgn0027579.1 1141 1311 +
Chr2	stalkie_big_nohaplotig	CDS	152549037	152549221	.	-	2	Parent=FBgn0027579.1.mrna1;Target=FBgn0027579.1 956 1140 +
Chr2	stalkie_big_nohaplotig	CDS	152549280	152549581	.	-	1	Parent=FBgn0027579.1.mrna1;Target=FBgn0027579.1 654 955 +
Chr2	stalkie_big_nohaplotig	CDS	152549631	152549761	.	-	0	Parent=FBgn0027579.1.mrna1;Target=FBgn0027579.1 523 653 +
Chr2	stalkie_big_nohaplotig	CDS	152549814	152550157	.	-	2	Parent=FBgn0027579.1.mrna1;Target=FBgn0027579.1 179 522 +
Chr2	stalkie_big_nohaplotig	CDS	152550209	152550386	.	-	0	Parent=FBgn0027579.1.mrna1;Target=FBgn0027579.1 1 178 +
Chr2	gffcl	locus	152560540	152561628	.	-	.	ID=RLOC_00022803;geneIDs=FBgn0003279.1.path1;transcripts=FBgn0003279.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152560540	152561628	.	-	.	ID=FBgn0003279.1.mrna1;geneID=FBgn0003279.1.path1;Name=FBgn0003279.1;Dir=sensecoverage=100.0;identity=99.8;matches=826;mismatches=1;indels=1;unknowns=0;Target=FBgn0003279.1 3 122 +;locus=RLOC_00022803
Chr2	stalkie_big_nohaplotig	exon	152560540	152561205	99	-	.	Parent=FBgn0003279.1.mrna1;Target=FBgn0003279.1 163 828 +
Chr2	stalkie_big_nohaplotig	exon	152561468	152561628	99	-	.	Parent=FBgn0003279.1.mrna1;Target=FBgn0003279.1 1 162 +
Chr2	stalkie_big_nohaplotig	CDS	152561508	152561626	.	-	0	Parent=FBgn0003279.1.mrna1
Chr2	gffcl	locus	152564122	152567492	.	.	.	ID=RLOC_00022804;geneIDs=FBgn0085433.1.path1,comp117315_c0_seq1.path1,comp135152_c0_seq1.path1;transcripts=FBgn0085433.1.mrna1,comp117315_c0_seq1.mrna1,comp135152_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152564122	152567492	.	-	.	ID=FBgn0085433.1.mrna1;geneID=FBgn0085433.1.path1;Name=FBgn0085433.1;Dir=sensecoverage=100.0;identity=99.9;matches=2254;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022804
Chr2	stalkie_big_nohaplotig	exon	152564122	152564200	100	-	.	Parent=FBgn0085433.1.mrna1;Target=FBgn0085433.1 2178 2256 +
Chr2	stalkie_big_nohaplotig	exon	152564253	152564840	100	-	.	Parent=FBgn0085433.1.mrna1;Target=FBgn0085433.1 1590 2177 +
Chr2	stalkie_big_nohaplotig	exon	152565168	152565305	100	-	.	Parent=FBgn0085433.1.mrna1;Target=FBgn0085433.1 1452 1589 +
Chr2	stalkie_big_nohaplotig	exon	152565381	152565685	100	-	.	Parent=FBgn0085433.1.mrna1;Target=FBgn0085433.1 1147 1451 +
Chr2	stalkie_big_nohaplotig	exon	152565745	152565881	99	-	.	Parent=FBgn0085433.1.mrna1;Target=FBgn0085433.1 1010 1146 +
Chr2	stalkie_big_nohaplotig	exon	152565934	152566159	99	-	.	Parent=FBgn0085433.1.mrna1;Target=FBgn0085433.1 784 1009 +
Chr2	stalkie_big_nohaplotig	exon	152566221	152566414	100	-	.	Parent=FBgn0085433.1.mrna1;Target=FBgn0085433.1 590 783 +
Chr2	stalkie_big_nohaplotig	exon	152566481	152566751	100	-	.	Parent=FBgn0085433.1.mrna1;Target=FBgn0085433.1 319 589 +
Chr2	stalkie_big_nohaplotig	exon	152567175	152567492	100	-	.	Parent=FBgn0085433.1.mrna1;Target=FBgn0085433.1 1 318 +
Chr2	stalkie_big_nohaplotig	CDS	152564122	152564200	.	-	1	Parent=FBgn0085433.1.mrna1;Target=FBgn0085433.1 2178 2256 +
Chr2	stalkie_big_nohaplotig	CDS	152564253	152564840	.	-	1	Parent=FBgn0085433.1.mrna1;Target=FBgn0085433.1 1590 2177 +
Chr2	stalkie_big_nohaplotig	CDS	152565168	152565305	.	-	1	Parent=FBgn0085433.1.mrna1;Target=FBgn0085433.1 1452 1589 +
Chr2	stalkie_big_nohaplotig	CDS	152565381	152565685	.	-	0	Parent=FBgn0085433.1.mrna1;Target=FBgn0085433.1 1147 1451 +
Chr2	stalkie_big_nohaplotig	CDS	152565745	152565881	.	-	2	Parent=FBgn0085433.1.mrna1;Target=FBgn0085433.1 1010 1146 +
Chr2	stalkie_big_nohaplotig	CDS	152565934	152566159	.	-	0	Parent=FBgn0085433.1.mrna1;Target=FBgn0085433.1 784 1009 +
Chr2	stalkie_big_nohaplotig	CDS	152566221	152566414	.	-	2	Parent=FBgn0085433.1.mrna1;Target=FBgn0085433.1 590 783 +
Chr2	stalkie_big_nohaplotig	CDS	152566481	152566751	.	-	0	Parent=FBgn0085433.1.mrna1;Target=FBgn0085433.1 319 589 +
Chr2	stalkie_big_nohaplotig	CDS	152567175	152567492	.	-	0	Parent=FBgn0085433.1.mrna1;Target=FBgn0085433.1 1 318 +
Chr2	stalkie_big_nohaplotig	mRNA	152564817	152565190	.	-	.	ID=comp117315_c0_seq1.mrna1;geneID=comp117315_c0_seq1.path1;Name=comp117315_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=373;mismatches=1;indels=0;unknowns=0;Target=comp117315_c0_seq1 374 1 .;CDS_Target=comp117315_c0_seq1 74 3 .;locus=RLOC_00022804
Chr2	stalkie_big_nohaplotig	exon	152564817	152565190	99	-	.	Parent=comp117315_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152565117	152565188	.	-	0	Parent=comp117315_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152566731	152567149	.	+	.	ID=comp135152_c0_seq1.mrna1;geneID=comp135152_c0_seq1.path1;Name=comp135152_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=419;mismatches=0;indels=0;unknowns=0;Target=comp135152_c0_seq1 419 1 .;CDS_Target=comp135152_c0_seq1 273 124 .;locus=RLOC_00022804
Chr2	stalkie_big_nohaplotig	exon	152566731	152567149	100	+	.	Parent=comp135152_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152566854	152567003	.	+	0	Parent=comp135152_c0_seq1.mrna1
Chr2	gffcl	locus	152574686	152578775	.	+	.	ID=RLOC_00022805;geneIDs=FBgn0039226.1.path1;transcripts=FBgn0039226.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152574686	152578775	.	+	.	ID=FBgn0039226.1.mrna1;geneID=FBgn0039226.1.path1;Name=FBgn0039226.1;Dir=sensecoverage=100.0;identity=99.6;matches=974;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022805
Chr2	stalkie_big_nohaplotig	exon	152574686	152574884	100	+	.	Parent=FBgn0039226.1.mrna1;Target=FBgn0039226.1 1 199 +
Chr2	stalkie_big_nohaplotig	exon	152574979	152575159	100	+	.	Parent=FBgn0039226.1.mrna1;Target=FBgn0039226.1 200 380 +
Chr2	stalkie_big_nohaplotig	exon	152578178	152578775	99	+	.	Parent=FBgn0039226.1.mrna1;Target=FBgn0039226.1 381 978 +
Chr2	stalkie_big_nohaplotig	CDS	152574686	152574884	.	+	0	Parent=FBgn0039226.1.mrna1;Target=FBgn0039226.1 1 199 +
Chr2	stalkie_big_nohaplotig	CDS	152574979	152575159	.	+	2	Parent=FBgn0039226.1.mrna1;Target=FBgn0039226.1 200 380 +
Chr2	stalkie_big_nohaplotig	CDS	152578178	152578775	.	+	1	Parent=FBgn0039226.1.mrna1;Target=FBgn0039226.1 381 978 +
Chr2	gffcl	locus	152578950	152582606	.	-	.	ID=RLOC_00022806;geneIDs=FBgn0039225.path1;transcripts=FBgn0039225.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152578950	152582606	.	-	.	ID=FBgn0039225.mrna1;geneID=FBgn0039225.path1;Name=FBgn0039225;Dir=sensecoverage=100.0;identity=99.7;matches=1050;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022806
Chr2	stalkie_big_nohaplotig	exon	152578950	152579400	99	-	.	Parent=FBgn0039225.mrna1;Target=FBgn0039225 603 1053 +
Chr2	stalkie_big_nohaplotig	exon	152579459	152579999	99	-	.	Parent=FBgn0039225.mrna1;Target=FBgn0039225 62 602 +
Chr2	stalkie_big_nohaplotig	exon	152582546	152582606	100	-	.	Parent=FBgn0039225.mrna1;Target=FBgn0039225 1 61 +
Chr2	stalkie_big_nohaplotig	CDS	152578950	152579400	.	-	1	Parent=FBgn0039225.mrna1;Target=FBgn0039225 603 1053 +
Chr2	stalkie_big_nohaplotig	CDS	152579459	152579999	.	-	2	Parent=FBgn0039225.mrna1;Target=FBgn0039225 62 602 +
Chr2	stalkie_big_nohaplotig	CDS	152582546	152582606	.	-	0	Parent=FBgn0039225.mrna1;Target=FBgn0039225 1 61 +
Chr2	gffcl	locus	152600097	152601314	.	+	.	ID=RLOC_00022807;geneIDs=FBgn0039223.1.path1;transcripts=FBgn0039223.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152600097	152601314	.	+	.	ID=FBgn0039223.1.mrna1;geneID=FBgn0039223.1.path1;Name=FBgn0039223.1;Dir=sensecoverage=100.0;identity=99.5;matches=1086;mismatches=5;indels=1;unknowns=0;locus=RLOC_00022807
Chr2	stalkie_big_nohaplotig	exon	152600097	152600870	99	+	.	Parent=FBgn0039223.1.mrna1;Target=FBgn0039223.1 1 775 +
Chr2	stalkie_big_nohaplotig	exon	152600929	152601056	99	+	.	Parent=FBgn0039223.1.mrna1;Target=FBgn0039223.1 776 903 +
Chr2	stalkie_big_nohaplotig	exon	152601126	152601314	100	+	.	Parent=FBgn0039223.1.mrna1;Target=FBgn0039223.1 904 1092 +
Chr2	stalkie_big_nohaplotig	CDS	152600159	152600870	.	+	0	Parent=FBgn0039223.1.mrna1;Target=FBgn0039223.1 64 775 +
Chr2	stalkie_big_nohaplotig	CDS	152600929	152601056	.	+	2	Parent=FBgn0039223.1.mrna1;Target=FBgn0039223.1 776 903 +
Chr2	stalkie_big_nohaplotig	CDS	152601126	152601314	.	+	0	Parent=FBgn0039223.1.mrna1;Target=FBgn0039223.1 904 1092 +
Chr2	gffcl	locus	152602160	152607705	.	-	.	ID=RLOC_00022808;geneIDs=FBgn0024957.1.path1,comp149350_c0_seq1.path1;transcripts=FBgn0024957.1.mrna1,comp149350_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152602160	152607705	.	-	.	ID=FBgn0024957.1.mrna1;geneID=FBgn0024957.1.path1;Name=FBgn0024957.1;Dir=sensecoverage=100.0;identity=99.5;matches=2705;mismatches=13;indels=0;unknowns=0;locus=RLOC_00022808
Chr2	stalkie_big_nohaplotig	exon	152602160	152602267	99	-	.	Parent=FBgn0024957.1.mrna1;Target=FBgn0024957.1 2611 2718 +
Chr2	stalkie_big_nohaplotig	exon	152602325	152602610	99	-	.	Parent=FBgn0024957.1.mrna1;Target=FBgn0024957.1 2325 2610 +
Chr2	stalkie_big_nohaplotig	exon	152602669	152603756	99	-	.	Parent=FBgn0024957.1.mrna1;Target=FBgn0024957.1 1237 2324 +
Chr2	stalkie_big_nohaplotig	exon	152604895	152605011	100	-	.	Parent=FBgn0024957.1.mrna1;Target=FBgn0024957.1 1120 1236 +
Chr2	stalkie_big_nohaplotig	exon	152605064	152605164	97	-	.	Parent=FBgn0024957.1.mrna1;Target=FBgn0024957.1 1019 1119 +
Chr2	stalkie_big_nohaplotig	exon	152605230	152605532	99	-	.	Parent=FBgn0024957.1.mrna1;Target=FBgn0024957.1 716 1018 +
Chr2	stalkie_big_nohaplotig	exon	152605600	152605874	99	-	.	Parent=FBgn0024957.1.mrna1;Target=FBgn0024957.1 441 715 +
Chr2	stalkie_big_nohaplotig	exon	152605934	152606079	97	-	.	Parent=FBgn0024957.1.mrna1;Target=FBgn0024957.1 295 440 +
Chr2	stalkie_big_nohaplotig	exon	152606136	152606305	100	-	.	Parent=FBgn0024957.1.mrna1;Target=FBgn0024957.1 125 294 +
Chr2	stalkie_big_nohaplotig	exon	152607496	152607588	100	-	.	Parent=FBgn0024957.1.mrna1;Target=FBgn0024957.1 32 124 +
Chr2	stalkie_big_nohaplotig	exon	152607675	152607705	100	-	.	Parent=FBgn0024957.1.mrna1;Target=FBgn0024957.1 1 31 +
Chr2	stalkie_big_nohaplotig	CDS	152602160	152602267	.	-	0	Parent=FBgn0024957.1.mrna1;Target=FBgn0024957.1 2611 2718 +
Chr2	stalkie_big_nohaplotig	CDS	152602325	152602610	.	-	1	Parent=FBgn0024957.1.mrna1;Target=FBgn0024957.1 2325 2610 +
Chr2	stalkie_big_nohaplotig	CDS	152602669	152603756	.	-	0	Parent=FBgn0024957.1.mrna1;Target=FBgn0024957.1 1237 2324 +
Chr2	stalkie_big_nohaplotig	CDS	152604895	152605011	.	-	0	Parent=FBgn0024957.1.mrna1;Target=FBgn0024957.1 1120 1236 +
Chr2	stalkie_big_nohaplotig	CDS	152605064	152605164	.	-	2	Parent=FBgn0024957.1.mrna1;Target=FBgn0024957.1 1019 1119 +
Chr2	stalkie_big_nohaplotig	CDS	152605230	152605532	.	-	2	Parent=FBgn0024957.1.mrna1;Target=FBgn0024957.1 716 1018 +
Chr2	stalkie_big_nohaplotig	CDS	152605600	152605874	.	-	1	Parent=FBgn0024957.1.mrna1;Target=FBgn0024957.1 441 715 +
Chr2	stalkie_big_nohaplotig	CDS	152605934	152606079	.	-	0	Parent=FBgn0024957.1.mrna1;Target=FBgn0024957.1 295 440 +
Chr2	stalkie_big_nohaplotig	CDS	152606136	152606305	.	-	2	Parent=FBgn0024957.1.mrna1;Target=FBgn0024957.1 125 294 +
Chr2	stalkie_big_nohaplotig	CDS	152607496	152607588	.	-	2	Parent=FBgn0024957.1.mrna1;Target=FBgn0024957.1 32 124 +
Chr2	stalkie_big_nohaplotig	CDS	152607675	152607705	.	-	0	Parent=FBgn0024957.1.mrna1;Target=FBgn0024957.1 1 31 +
Chr2	stalkie_big_nohaplotig	mRNA	152604102	152604973	.	-	.	ID=comp149350_c0_seq1.mrna1;geneID=comp149350_c0_seq1.path1;Name=comp149350_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.2;matches=865;mismatches=7;indels=0;unknowns=0;Target=comp149350_c0_seq1 872 1 .;CDS_Target=comp149350_c0_seq1 340 149 .;locus=RLOC_00022808
Chr2	stalkie_big_nohaplotig	exon	152604102	152604973	99	-	.	Parent=comp149350_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152604634	152604825	.	-	0	Parent=comp149350_c0_seq1.mrna1
Chr2	gffcl	locus	152608910	152609732	.	-	.	ID=RLOC_00022809;geneIDs=comp52749_c0_seq1.path1;transcripts=comp52749_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152608910	152609732	.	-	.	ID=comp52749_c0_seq1.mrna1;geneID=comp52749_c0_seq1.path1;Name=comp52749_c0_seq1;Dir=sensecoverage=99.9;identity=98.8;matches=747;mismatches=2;indels=7;unknowns=0;locus=RLOC_00022809
Chr2	stalkie_big_nohaplotig	exon	152608910	152609450	99	-	.	Parent=comp52749_c0_seq1.mrna1;Target=comp52749_c0_seq1 209 749 +
Chr2	stalkie_big_nohaplotig	exon	152609518	152609732	96	-	.	Parent=comp52749_c0_seq1.mrna1;Target=comp52749_c0_seq1 1 208 +
Chr2	stalkie_big_nohaplotig	CDS	152609317	152609450	.	-	2	Parent=comp52749_c0_seq1.mrna1;Target=comp52749_c0_seq1 209 342 +
Chr2	stalkie_big_nohaplotig	CDS	152609518	152609533	.	-	0	Parent=comp52749_c0_seq1.mrna1;Target=comp52749_c0_seq1 193 208 +
Chr2	gffcl	locus	152611198	152611528	.	+	.	ID=RLOC_00022810;geneIDs=comp135584_c0_seq1.path1;transcripts=comp135584_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152611198	152611528	.	+	.	ID=comp135584_c0_seq1.mrna1;geneID=comp135584_c0_seq1.path1;Name=comp135584_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=330;mismatches=1;indels=0;unknowns=0;Target=comp135584_c0_seq1 331 1 .;CDS_Target=comp135584_c0_seq1 236 156 .;locus=RLOC_00022810
Chr2	stalkie_big_nohaplotig	exon	152611198	152611528	99	+	.	Parent=comp135584_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152611353	152611433	.	+	0	Parent=comp135584_c0_seq1.mrna1
Chr2	gffcl	locus	152634981	152637291	.	+	.	ID=RLOC_00022812;geneIDs=FBgn0263351.1.path1;transcripts=FBgn0263351.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152634981	152637291	.	+	.	ID=FBgn0263351.1.mrna1;geneID=FBgn0263351.1.path1;Name=FBgn0263351.1;Dir=sensecoverage=100.0;identity=99.2;matches=1310;mismatches=10;indels=0;unknowns=0;locus=RLOC_00022812
Chr2	stalkie_big_nohaplotig	exon	152634981	152635166	99	+	.	Parent=FBgn0263351.1.mrna1;Target=FBgn0263351.1 1 186 +
Chr2	stalkie_big_nohaplotig	exon	152635233	152635511	99	+	.	Parent=FBgn0263351.1.mrna1;Target=FBgn0263351.1 187 465 +
Chr2	stalkie_big_nohaplotig	exon	152635574	152635733	96	+	.	Parent=FBgn0263351.1.mrna1;Target=FBgn0263351.1 466 625 +
Chr2	stalkie_big_nohaplotig	exon	152636597	152637291	99	+	.	Parent=FBgn0263351.1.mrna1;Target=FBgn0263351.1 626 1320 +
Chr2	stalkie_big_nohaplotig	CDS	152634981	152635166	.	+	0	Parent=FBgn0263351.1.mrna1;Target=FBgn0263351.1 1 186 +
Chr2	stalkie_big_nohaplotig	CDS	152635233	152635511	.	+	0	Parent=FBgn0263351.1.mrna1;Target=FBgn0263351.1 187 465 +
Chr2	stalkie_big_nohaplotig	CDS	152635574	152635733	.	+	0	Parent=FBgn0263351.1.mrna1;Target=FBgn0263351.1 466 625 +
Chr2	stalkie_big_nohaplotig	CDS	152636597	152637291	.	+	2	Parent=FBgn0263351.1.mrna1;Target=FBgn0263351.1 626 1320 +
Chr2	gffcl	locus	152639605	152640274	.	+	.	ID=RLOC_00022813;geneIDs=FBgn0038973.2.path1;transcripts=FBgn0038973.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152639605	152640274	.	+	.	ID=FBgn0038973.2.mrna1;geneID=FBgn0038973.2.path1;Name=FBgn0038973.2;Dir=sensecoverage=100.0;identity=99.6;matches=538;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022813
Chr2	stalkie_big_nohaplotig	exon	152639605	152639667	96	+	.	Parent=FBgn0038973.2.mrna1;Target=FBgn0038973.2 1 63 +
Chr2	stalkie_big_nohaplotig	exon	152639736	152640070	100	+	.	Parent=FBgn0038973.2.mrna1;Target=FBgn0038973.2 64 398 +
Chr2	stalkie_big_nohaplotig	exon	152640133	152640274	100	+	.	Parent=FBgn0038973.2.mrna1;Target=FBgn0038973.2 399 540 +
Chr2	stalkie_big_nohaplotig	CDS	152639605	152639667	.	+	0	Parent=FBgn0038973.2.mrna1;Target=FBgn0038973.2 1 63 +
Chr2	stalkie_big_nohaplotig	CDS	152639736	152640070	.	+	0	Parent=FBgn0038973.2.mrna1;Target=FBgn0038973.2 64 398 +
Chr2	stalkie_big_nohaplotig	CDS	152640133	152640274	.	+	1	Parent=FBgn0038973.2.mrna1;Target=FBgn0038973.2 399 540 +
Chr2	gffcl	locus	152640915	152641586	.	+	.	ID=RLOC_00022814;geneIDs=FBgn0038973.1.path1;transcripts=FBgn0038973.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152640915	152641586	.	+	.	ID=FBgn0038973.1.mrna1;geneID=FBgn0038973.1.path1;Name=FBgn0038973.1;Dir=sensecoverage=100.0;identity=100.0;matches=540;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022814
Chr2	stalkie_big_nohaplotig	exon	152640915	152640983	100	+	.	Parent=FBgn0038973.1.mrna1;Target=FBgn0038973.1 1 69 +
Chr2	stalkie_big_nohaplotig	exon	152641053	152641387	100	+	.	Parent=FBgn0038973.1.mrna1;Target=FBgn0038973.1 70 404 +
Chr2	stalkie_big_nohaplotig	exon	152641451	152641586	100	+	.	Parent=FBgn0038973.1.mrna1;Target=FBgn0038973.1 405 540 +
Chr2	stalkie_big_nohaplotig	CDS	152640915	152640983	.	+	0	Parent=FBgn0038973.1.mrna1;Target=FBgn0038973.1 1 69 +
Chr2	stalkie_big_nohaplotig	CDS	152641053	152641387	.	+	0	Parent=FBgn0038973.1.mrna1;Target=FBgn0038973.1 70 404 +
Chr2	stalkie_big_nohaplotig	CDS	152641451	152641586	.	+	1	Parent=FBgn0038973.1.mrna1;Target=FBgn0038973.1 405 540 +
Chr2	gffcl	locus	152642423	152643913	.	-	.	ID=RLOC_00022815;geneIDs=FBgn0038974.1.path1,comp158078_c0_seq1.path1;transcripts=comp158078_c0_seq1.mrna1,FBgn0038974.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152642423	152643913	.	-	.	ID=comp158078_c0_seq1.mrna1;geneID=comp158078_c0_seq1.path1;Name=comp158078_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.6;matches=1457;mismatches=31;indels=5;unknowns=0;Target=comp158078_c0_seq1 1491 2 .;CDS_Target=comp158078_c0_seq1 1090 278 .;locus=RLOC_00022815
Chr2	stalkie_big_nohaplotig	exon	152642423	152643913	97	-	.	Parent=comp158078_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152642824	152643639	.	-	0	Parent=comp158078_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152642678	152643642	.	-	.	ID=FBgn0038974.1.mrna1;geneID=FBgn0038974.1.path1;Name=FBgn0038974.1;Dir=sensecoverage=100.0;identity=98.8;matches=839;mismatches=10;indels=0;unknowns=0;locus=RLOC_00022815
Chr2	stalkie_big_nohaplotig	exon	152642678	152642771	98	-	.	Parent=FBgn0038974.1.mrna1;Target=FBgn0038974.1 756 849 +
Chr2	stalkie_big_nohaplotig	exon	152642828	152643083	98	-	.	Parent=FBgn0038974.1.mrna1;Target=FBgn0038974.1 500 755 +
Chr2	stalkie_big_nohaplotig	exon	152643144	152643642	98	-	.	Parent=FBgn0038974.1.mrna1;Target=FBgn0038974.1 1 499 +
Chr2	stalkie_big_nohaplotig	CDS	152642678	152642771	.	-	1	Parent=FBgn0038974.1.mrna1;Target=FBgn0038974.1 756 849 +
Chr2	stalkie_big_nohaplotig	CDS	152642828	152643083	.	-	2	Parent=FBgn0038974.1.mrna1;Target=FBgn0038974.1 500 755 +
Chr2	stalkie_big_nohaplotig	CDS	152643144	152643642	.	-	0	Parent=FBgn0038974.1.mrna1;Target=FBgn0038974.1 1 499 +
Chr2	gffcl	locus	152648233	152650726	.	.	.	ID=RLOC_00022816;geneIDs=FBgn0032198.1.path1,comp134964_c0_seq1.path1,comp151589_c0_seq1.path1;transcripts=FBgn0032198.1.mrna1,comp134964_c0_seq1.mrna1,comp151589_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152648233	152650726	.	+	.	ID=FBgn0032198.1.mrna1;geneID=FBgn0032198.1.path1;Name=FBgn0032198.1;Dir=sensecoverage=100.0;identity=99.7;matches=912;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022816
Chr2	stalkie_big_nohaplotig	exon	152648233	152648436	100	+	.	Parent=FBgn0032198.1.mrna1;Target=FBgn0032198.1 1 204 +
Chr2	stalkie_big_nohaplotig	exon	152649697	152649777	100	+	.	Parent=FBgn0032198.1.mrna1;Target=FBgn0032198.1 205 285 +
Chr2	stalkie_big_nohaplotig	exon	152650097	152650726	99	+	.	Parent=FBgn0032198.1.mrna1;Target=FBgn0032198.1 286 915 +
Chr2	stalkie_big_nohaplotig	CDS	152648233	152648436	.	+	0	Parent=FBgn0032198.1.mrna1;Target=FBgn0032198.1 1 204 +
Chr2	stalkie_big_nohaplotig	CDS	152649697	152649777	.	+	0	Parent=FBgn0032198.1.mrna1;Target=FBgn0032198.1 205 285 +
Chr2	stalkie_big_nohaplotig	CDS	152650097	152650726	.	+	0	Parent=FBgn0032198.1.mrna1;Target=FBgn0032198.1 286 915 +
Chr2	stalkie_big_nohaplotig	mRNA	152648414	152648661	.	-	.	ID=comp134964_c0_seq1.mrna1;geneID=comp134964_c0_seq1.path1;Name=comp134964_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=248;mismatches=0;indels=2;unknowns=0;Target=comp134964_c0_seq1 250 1 .;CDS_Target=comp134964_c0_seq1 246 142 .;locus=RLOC_00022816
Chr2	stalkie_big_nohaplotig	exon	152648414	152648661	99	-	.	Parent=comp134964_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152648418	152648520	.	-	0	Parent=comp134964_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152649080	152649715	.	-	.	ID=comp151589_c0_seq1.mrna1;geneID=comp151589_c0_seq1.path1;Name=comp151589_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=627;mismatches=9;indels=5;unknowns=0;Target=comp151589_c0_seq1 641 1 .;CDS_Target=comp151589_c0_seq1 349 263 .;locus=RLOC_00022816
Chr2	stalkie_big_nohaplotig	exon	152649080	152649715	97	-	.	Parent=comp151589_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152649372	152649453	.	-	0	Parent=comp151589_c0_seq1.mrna1
Chr2	gffcl	locus	152652051	152654308	.	+	.	ID=RLOC_00022817;geneIDs=FBgn0003676.1.path1;transcripts=FBgn0003676.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152652051	152654308	.	+	.	ID=FBgn0003676.1.mrna1;geneID=FBgn0003676.1.path1;Name=FBgn0003676.1;Dir=sensecoverage=100.0;identity=99.4;matches=1685;mismatches=10;indels=0;unknowns=0;locus=RLOC_00022817
Chr2	stalkie_big_nohaplotig	exon	152652051	152652150	100	+	.	Parent=FBgn0003676.1.mrna1;Target=FBgn0003676.1 1 100 +
Chr2	stalkie_big_nohaplotig	exon	152652409	152652562	98	+	.	Parent=FBgn0003676.1.mrna1;Target=FBgn0003676.1 101 254 +
Chr2	stalkie_big_nohaplotig	exon	152652626	152652713	100	+	.	Parent=FBgn0003676.1.mrna1;Target=FBgn0003676.1 255 342 +
Chr2	stalkie_big_nohaplotig	exon	152652772	152653005	99	+	.	Parent=FBgn0003676.1.mrna1;Target=FBgn0003676.1 343 576 +
Chr2	stalkie_big_nohaplotig	exon	152653068	152653636	99	+	.	Parent=FBgn0003676.1.mrna1;Target=FBgn0003676.1 577 1145 +
Chr2	stalkie_big_nohaplotig	exon	152653701	152653881	99	+	.	Parent=FBgn0003676.1.mrna1;Target=FBgn0003676.1 1146 1326 +
Chr2	stalkie_big_nohaplotig	exon	152653940	152654308	99	+	.	Parent=FBgn0003676.1.mrna1;Target=FBgn0003676.1 1327 1695 +
Chr2	stalkie_big_nohaplotig	CDS	152652051	152652150	.	+	0	Parent=FBgn0003676.1.mrna1;Target=FBgn0003676.1 1 100 +
Chr2	stalkie_big_nohaplotig	CDS	152652409	152652562	.	+	2	Parent=FBgn0003676.1.mrna1;Target=FBgn0003676.1 101 254 +
Chr2	stalkie_big_nohaplotig	CDS	152652626	152652713	.	+	1	Parent=FBgn0003676.1.mrna1;Target=FBgn0003676.1 255 342 +
Chr2	stalkie_big_nohaplotig	CDS	152652772	152653005	.	+	0	Parent=FBgn0003676.1.mrna1;Target=FBgn0003676.1 343 576 +
Chr2	stalkie_big_nohaplotig	CDS	152653068	152653636	.	+	0	Parent=FBgn0003676.1.mrna1;Target=FBgn0003676.1 577 1145 +
Chr2	stalkie_big_nohaplotig	CDS	152653701	152653881	.	+	1	Parent=FBgn0003676.1.mrna1;Target=FBgn0003676.1 1146 1326 +
Chr2	stalkie_big_nohaplotig	CDS	152653940	152654308	.	+	0	Parent=FBgn0003676.1.mrna1;Target=FBgn0003676.1 1327 1695 +
Chr2	gffcl	locus	152654741	152655410	.	+	.	ID=RLOC_00022818;geneIDs=FBgn0038977.1.path1;transcripts=FBgn0038977.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152654741	152655410	.	+	.	ID=FBgn0038977.1.mrna1;geneID=FBgn0038977.1.path1;Name=FBgn0038977.1;Dir=sensecoverage=100.0;identity=99.3;matches=593;mismatches=3;indels=1;unknowns=0;locus=RLOC_00022818
Chr2	stalkie_big_nohaplotig	exon	152654741	152654950	99	+	.	Parent=FBgn0038977.1.mrna1;Target=FBgn0038977.1 1 210 +
Chr2	stalkie_big_nohaplotig	exon	152655025	152655410	99	+	.	Parent=FBgn0038977.1.mrna1;Target=FBgn0038977.1 211 597 +
Chr2	stalkie_big_nohaplotig	CDS	152654741	152654950	.	+	0	Parent=FBgn0038977.1.mrna1;Target=FBgn0038977.1 1 210 +
Chr2	stalkie_big_nohaplotig	CDS	152655025	152655410	.	+	0	Parent=FBgn0038977.1.mrna1;Target=FBgn0038977.1 211 597 +
Chr2	gffcl	locus	152657037	152657801	.	-	.	ID=RLOC_00022819;geneIDs=FBgn0038976.1.path1;transcripts=FBgn0038976.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152657037	152657801	.	-	.	ID=FBgn0038976.1.mrna1;geneID=FBgn0038976.1.path1;Name=FBgn0038976.1;Dir=sensecoverage=100.0;identity=99.6;matches=526;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022819
Chr2	stalkie_big_nohaplotig	exon	152657037	152657210	99	-	.	Parent=FBgn0038976.1.mrna1;Target=FBgn0038976.1 355 528 +
Chr2	stalkie_big_nohaplotig	exon	152657392	152657601	100	-	.	Parent=FBgn0038976.1.mrna1;Target=FBgn0038976.1 145 354 +
Chr2	stalkie_big_nohaplotig	exon	152657658	152657801	99	-	.	Parent=FBgn0038976.1.mrna1;Target=FBgn0038976.1 1 144 +
Chr2	stalkie_big_nohaplotig	CDS	152657037	152657210	.	-	0	Parent=FBgn0038976.1.mrna1;Target=FBgn0038976.1 355 528 +
Chr2	stalkie_big_nohaplotig	CDS	152657392	152657601	.	-	0	Parent=FBgn0038976.1.mrna1;Target=FBgn0038976.1 145 354 +
Chr2	stalkie_big_nohaplotig	CDS	152657658	152657801	.	-	0	Parent=FBgn0038976.1.mrna1;Target=FBgn0038976.1 1 144 +
Chr2	gffcl	locus	152658111	152659080	.	+	.	ID=RLOC_00022820;geneIDs=FBgn0022344.1.path1;transcripts=FBgn0022344.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152658111	152659080	.	+	.	ID=FBgn0022344.1.mrna1;geneID=FBgn0022344.1.path1;Name=FBgn0022344.1;Dir=sensecoverage=100.0;identity=99.8;matches=859;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022820
Chr2	stalkie_big_nohaplotig	exon	152658111	152658382	99	+	.	Parent=FBgn0022344.1.mrna1;Target=FBgn0022344.1 1 272 +
Chr2	stalkie_big_nohaplotig	exon	152658437	152658764	99	+	.	Parent=FBgn0022344.1.mrna1;Target=FBgn0022344.1 273 600 +
Chr2	stalkie_big_nohaplotig	exon	152658820	152659080	100	+	.	Parent=FBgn0022344.1.mrna1;Target=FBgn0022344.1 601 861 +
Chr2	stalkie_big_nohaplotig	CDS	152658111	152658382	.	+	0	Parent=FBgn0022344.1.mrna1;Target=FBgn0022344.1 1 272 +
Chr2	stalkie_big_nohaplotig	CDS	152658437	152658764	.	+	1	Parent=FBgn0022344.1.mrna1;Target=FBgn0022344.1 273 600 +
Chr2	stalkie_big_nohaplotig	CDS	152658820	152659080	.	+	0	Parent=FBgn0022344.1.mrna1;Target=FBgn0022344.1 601 861 +
Chr2	gffcl	locus	152699276	152713226	.	+	.	ID=RLOC_00022821;geneIDs=FBgn0020907.1.path1;transcripts=FBgn0020907.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152699276	152713226	.	+	.	ID=FBgn0020907.1.mrna1;geneID=FBgn0020907.1.path1;Name=FBgn0020907.1;Dir=sensecoverage=96.8;identity=100.0;matches=610;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022821
Chr2	stalkie_big_nohaplotig	exon	152699276	152699391	100	+	.	Parent=FBgn0020907.1.mrna1;Target=FBgn0020907.1 21 136 +
Chr2	stalkie_big_nohaplotig	exon	152701715	152701767	100	+	.	Parent=FBgn0020907.1.mrna1;Target=FBgn0020907.1 137 189 +
Chr2	stalkie_big_nohaplotig	exon	152704471	152704590	100	+	.	Parent=FBgn0020907.1.mrna1;Target=FBgn0020907.1 190 309 +
Chr2	stalkie_big_nohaplotig	exon	152712827	152713039	100	+	.	Parent=FBgn0020907.1.mrna1;Target=FBgn0020907.1 310 522 +
Chr2	stalkie_big_nohaplotig	exon	152713119	152713226	100	+	.	Parent=FBgn0020907.1.mrna1;Target=FBgn0020907.1 523 630 +
Chr2	stalkie_big_nohaplotig	CDS	152699277	152699391	.	+	0	Parent=FBgn0020907.1.mrna1;Target=FBgn0020907.1 22 136 +
Chr2	stalkie_big_nohaplotig	CDS	152701715	152701767	.	+	2	Parent=FBgn0020907.1.mrna1;Target=FBgn0020907.1 137 189 +
Chr2	stalkie_big_nohaplotig	CDS	152704471	152704590	.	+	0	Parent=FBgn0020907.1.mrna1;Target=FBgn0020907.1 190 309 +
Chr2	stalkie_big_nohaplotig	CDS	152712827	152713039	.	+	0	Parent=FBgn0020907.1.mrna1;Target=FBgn0020907.1 310 522 +
Chr2	stalkie_big_nohaplotig	CDS	152713119	152713226	.	+	0	Parent=FBgn0020907.1.mrna1;Target=FBgn0020907.1 523 630 +
Chr2	gffcl	locus	152702844	152704191	.	-	.	ID=RLOC_00022822;geneIDs=comp145959_c0_seq1.path1;transcripts=comp145959_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152702844	152704191	.	-	.	ID=comp145959_c0_seq1.mrna1;geneID=comp145959_c0_seq1.path1;Name=comp145959_c0_seq1;Dir=indeterminatecoverage=37.2;identity=90.1;matches=410;mismatches=13;indels=32;unknowns=0;Target=comp145959_c0_seq1 51 1 .;locus=RLOC_00022822
Chr2	stalkie_big_nohaplotig	exon	152702844	152703140	87	-	.	Parent=comp145959_c0_seq1.mrna1;Target=comp145959_c0_seq1 455 131 .
Chr2	stalkie_big_nohaplotig	exon	152704066	152704191	96	-	.	Parent=comp145959_c0_seq1.mrna1;Target=comp145959_c0_seq1 130 1 .
Chr2	stalkie_big_nohaplotig	CDS	152704141	152704191	.	-	0	Parent=comp145959_c0_seq1.mrna1
Chr2	gffcl	locus	152717903	152718355	.	+	.	ID=RLOC_00022823;geneIDs=FBgn0038446.1.path1;transcripts=FBgn0038446.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152717903	152718355	.	+	.	ID=FBgn0038446.1.mrna1;geneID=FBgn0038446.1.path1;Name=FBgn0038446.1;Dir=sensecoverage=100.0;identity=98.2;matches=386;mismatches=6;indels=1;unknowns=0;locus=RLOC_00022823
Chr2	stalkie_big_nohaplotig	exon	152717903	152718123	96	+	.	Parent=FBgn0038446.1.mrna1;Target=FBgn0038446.1 1 222 +
Chr2	stalkie_big_nohaplotig	exon	152718185	152718355	100	+	.	Parent=FBgn0038446.1.mrna1;Target=FBgn0038446.1 223 393 +
Chr2	stalkie_big_nohaplotig	CDS	152717938	152718123	.	+	0	Parent=FBgn0038446.1.mrna1;Target=FBgn0038446.1 37 222 +
Chr2	stalkie_big_nohaplotig	CDS	152718185	152718355	.	+	0	Parent=FBgn0038446.1.mrna1;Target=FBgn0038446.1 223 393 +
Chr2	gffcl	locus	152725097	152726516	.	+	.	ID=RLOC_00022824;geneIDs=comp156925_c1_seq1.path1;transcripts=comp156925_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152725097	152726516	.	+	.	ID=comp156925_c1_seq1.mrna1;geneID=comp156925_c1_seq1.path1;Name=comp156925_c1_seq1;Dir=indeterminatecoverage=99.9;identity=99.4;matches=1412;mismatches=8;indels=0;unknowns=0;Target=comp156925_c1_seq1 1421 2 .;CDS_Target=comp156925_c1_seq1 1225 1103 .;locus=RLOC_00022824
Chr2	stalkie_big_nohaplotig	exon	152725097	152726516	99	+	.	Parent=comp156925_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152726198	152726320	.	+	0	Parent=comp156925_c1_seq1.mrna1
Chr2	gffcl	locus	152728220	152792372	.	-	.	ID=RLOC_00022825;geneIDs=FBgn0259244.1.path1;transcripts=FBgn0259244.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152728220	152792372	.	-	.	ID=FBgn0259244.1.mrna1;geneID=FBgn0259244.1.path1;Name=FBgn0259244.1;Dir=sensecoverage=85.1;identity=99.2;matches=1290;mismatches=9;indels=1;unknowns=0;locus=RLOC_00022825
Chr2	stalkie_big_nohaplotig	exon	152728220	152728270	100	-	.	Parent=FBgn0259244.1.mrna1;Target=FBgn0259244.1 1798 1848 +
Chr2	stalkie_big_nohaplotig	exon	152728339	152728383	97	-	.	Parent=FBgn0259244.1.mrna1;Target=FBgn0259244.1 1753 1797 +
Chr2	stalkie_big_nohaplotig	exon	152728438	152728533	98	-	.	Parent=FBgn0259244.1.mrna1;Target=FBgn0259244.1 1657 1752 +
Chr2	stalkie_big_nohaplotig	exon	152728600	152728671	100	-	.	Parent=FBgn0259244.1.mrna1;Target=FBgn0259244.1 1585 1656 +
Chr2	stalkie_big_nohaplotig	exon	152728734	152729093	99	-	.	Parent=FBgn0259244.1.mrna1;Target=FBgn0259244.1 1225 1584 +
Chr2	stalkie_big_nohaplotig	exon	152747554	152747651	100	-	.	Parent=FBgn0259244.1.mrna1;Target=FBgn0259244.1 1127 1224 +
Chr2	stalkie_big_nohaplotig	exon	152753250	152753355	100	-	.	Parent=FBgn0259244.1.mrna1;Target=FBgn0259244.1 1021 1126 +
Chr2	stalkie_big_nohaplotig	exon	152753905	152754084	100	-	.	Parent=FBgn0259244.1.mrna1;Target=FBgn0259244.1 841 1020 +
Chr2	stalkie_big_nohaplotig	exon	152756225	152756293	100	-	.	Parent=FBgn0259244.1.mrna1;Target=FBgn0259244.1 772 840 +
Chr2	stalkie_big_nohaplotig	exon	152756397	152756504	99	-	.	Parent=FBgn0259244.1.mrna1;Target=FBgn0259244.1 664 771 +
Chr2	stalkie_big_nohaplotig	exon	152756567	152756648	100	-	.	Parent=FBgn0259244.1.mrna1;Target=FBgn0259244.1 582 663 +
Chr2	stalkie_big_nohaplotig	exon	152759796	152759804	100	-	.	Parent=FBgn0259244.1.mrna1;Target=FBgn0259244.1 558 566 +
Chr2	stalkie_big_nohaplotig	exon	152792350	152792372	82	-	.	Parent=FBgn0259244.1.mrna1;Target=FBgn0259244.1 276 297 +
Chr2	stalkie_big_nohaplotig	CDS	152728220	152728270	.	-	0	Parent=FBgn0259244.1.mrna1;Target=FBgn0259244.1 1798 1848 +
Chr2	stalkie_big_nohaplotig	CDS	152728339	152728383	.	-	0	Parent=FBgn0259244.1.mrna1;Target=FBgn0259244.1 1753 1797 +
Chr2	stalkie_big_nohaplotig	CDS	152728438	152728533	.	-	0	Parent=FBgn0259244.1.mrna1;Target=FBgn0259244.1 1657 1752 +
Chr2	stalkie_big_nohaplotig	CDS	152728600	152728671	.	-	0	Parent=FBgn0259244.1.mrna1;Target=FBgn0259244.1 1585 1656 +
Chr2	stalkie_big_nohaplotig	CDS	152728734	152729009	.	-	0	Parent=FBgn0259244.1.mrna1;Target=FBgn0259244.1 1309 1584 +
Chr2	gffcl	locus	152765392	152777603	.	-	.	ID=RLOC_00022826;geneIDs=FBgn0027562.1.path1;transcripts=FBgn0027562.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152765392	152777603	.	-	.	ID=FBgn0027562.1.mrna1;geneID=FBgn0027562.1.path1;Name=FBgn0027562.1;Dir=sensecoverage=100.0;identity=99.6;matches=1688;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022826
Chr2	stalkie_big_nohaplotig	exon	152765392	152765748	100	-	.	Parent=FBgn0027562.1.mrna1;Target=FBgn0027562.1 1339 1695 +
Chr2	stalkie_big_nohaplotig	exon	152765852	152765977	100	-	.	Parent=FBgn0027562.1.mrna1;Target=FBgn0027562.1 1213 1338 +
Chr2	stalkie_big_nohaplotig	exon	152766154	152766272	100	-	.	Parent=FBgn0027562.1.mrna1;Target=FBgn0027562.1 1094 1212 +
Chr2	stalkie_big_nohaplotig	exon	152766894	152767180	99	-	.	Parent=FBgn0027562.1.mrna1;Target=FBgn0027562.1 807 1093 +
Chr2	stalkie_big_nohaplotig	exon	152767249	152767403	99	-	.	Parent=FBgn0027562.1.mrna1;Target=FBgn0027562.1 652 806 +
Chr2	stalkie_big_nohaplotig	exon	152767944	152768453	99	-	.	Parent=FBgn0027562.1.mrna1;Target=FBgn0027562.1 142 651 +
Chr2	stalkie_big_nohaplotig	exon	152768552	152768643	98	-	.	Parent=FBgn0027562.1.mrna1;Target=FBgn0027562.1 50 141 +
Chr2	stalkie_big_nohaplotig	exon	152777555	152777603	100	-	.	Parent=FBgn0027562.1.mrna1;Target=FBgn0027562.1 1 49 +
Chr2	stalkie_big_nohaplotig	CDS	152765392	152765748	.	-	0	Parent=FBgn0027562.1.mrna1;Target=FBgn0027562.1 1339 1695 +
Chr2	stalkie_big_nohaplotig	CDS	152765852	152765977	.	-	0	Parent=FBgn0027562.1.mrna1;Target=FBgn0027562.1 1213 1338 +
Chr2	stalkie_big_nohaplotig	CDS	152766154	152766272	.	-	2	Parent=FBgn0027562.1.mrna1;Target=FBgn0027562.1 1094 1212 +
Chr2	stalkie_big_nohaplotig	CDS	152766894	152767180	.	-	1	Parent=FBgn0027562.1.mrna1;Target=FBgn0027562.1 807 1093 +
Chr2	stalkie_big_nohaplotig	CDS	152767249	152767403	.	-	0	Parent=FBgn0027562.1.mrna1;Target=FBgn0027562.1 652 806 +
Chr2	stalkie_big_nohaplotig	CDS	152767944	152768453	.	-	0	Parent=FBgn0027562.1.mrna1;Target=FBgn0027562.1 142 651 +
Chr2	stalkie_big_nohaplotig	CDS	152768552	152768643	.	-	2	Parent=FBgn0027562.1.mrna1;Target=FBgn0027562.1 50 141 +
Chr2	stalkie_big_nohaplotig	CDS	152777555	152777603	.	-	0	Parent=FBgn0027562.1.mrna1;Target=FBgn0027562.1 1 49 +
Chr2	gffcl	locus	152794468	152797754	.	-	.	ID=RLOC_00022827;geneIDs=FBgn0051103.1.path1;transcripts=FBgn0051103.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152794468	152797754	.	-	.	ID=FBgn0051103.1.mrna1;geneID=FBgn0051103.1.path1;Name=FBgn0051103.1;Dir=sensecoverage=100.0;identity=99.3;matches=1591;mismatches=11;indels=0;unknowns=0;locus=RLOC_00022827
Chr2	stalkie_big_nohaplotig	exon	152794468	152794502	100	-	.	Parent=FBgn0051103.1.mrna1;Target=FBgn0051103.1 1568 1602 +
Chr2	stalkie_big_nohaplotig	exon	152794568	152794695	98	-	.	Parent=FBgn0051103.1.mrna1;Target=FBgn0051103.1 1440 1567 +
Chr2	stalkie_big_nohaplotig	exon	152794746	152795029	100	-	.	Parent=FBgn0051103.1.mrna1;Target=FBgn0051103.1 1156 1439 +
Chr2	stalkie_big_nohaplotig	exon	152796219	152796363	99	-	.	Parent=FBgn0051103.1.mrna1;Target=FBgn0051103.1 1011 1155 +
Chr2	stalkie_big_nohaplotig	exon	152796455	152796872	98	-	.	Parent=FBgn0051103.1.mrna1;Target=FBgn0051103.1 593 1010 +
Chr2	stalkie_big_nohaplotig	exon	152796964	152797085	100	-	.	Parent=FBgn0051103.1.mrna1;Target=FBgn0051103.1 471 592 +
Chr2	stalkie_big_nohaplotig	exon	152797155	152797317	100	-	.	Parent=FBgn0051103.1.mrna1;Target=FBgn0051103.1 308 470 +
Chr2	stalkie_big_nohaplotig	exon	152797390	152797551	100	-	.	Parent=FBgn0051103.1.mrna1;Target=FBgn0051103.1 146 307 +
Chr2	stalkie_big_nohaplotig	exon	152797610	152797754	100	-	.	Parent=FBgn0051103.1.mrna1;Target=FBgn0051103.1 1 145 +
Chr2	stalkie_big_nohaplotig	CDS	152794468	152794502	.	-	2	Parent=FBgn0051103.1.mrna1;Target=FBgn0051103.1 1568 1602 +
Chr2	stalkie_big_nohaplotig	CDS	152794568	152794695	.	-	1	Parent=FBgn0051103.1.mrna1;Target=FBgn0051103.1 1440 1567 +
Chr2	stalkie_big_nohaplotig	CDS	152794746	152795029	.	-	0	Parent=FBgn0051103.1.mrna1;Target=FBgn0051103.1 1156 1439 +
Chr2	stalkie_big_nohaplotig	CDS	152796219	152796363	.	-	1	Parent=FBgn0051103.1.mrna1;Target=FBgn0051103.1 1011 1155 +
Chr2	stalkie_big_nohaplotig	CDS	152796455	152796872	.	-	2	Parent=FBgn0051103.1.mrna1;Target=FBgn0051103.1 593 1010 +
Chr2	stalkie_big_nohaplotig	CDS	152796964	152797085	.	-	1	Parent=FBgn0051103.1.mrna1;Target=FBgn0051103.1 471 592 +
Chr2	stalkie_big_nohaplotig	CDS	152797155	152797317	.	-	2	Parent=FBgn0051103.1.mrna1;Target=FBgn0051103.1 308 470 +
Chr2	stalkie_big_nohaplotig	CDS	152797390	152797551	.	-	2	Parent=FBgn0051103.1.mrna1;Target=FBgn0051103.1 146 307 +
Chr2	stalkie_big_nohaplotig	CDS	152797610	152797754	.	-	0	Parent=FBgn0051103.1.mrna1;Target=FBgn0051103.1 1 145 +
Chr2	gffcl	locus	152800800	152810236	.	.	.	ID=RLOC_00022828;geneIDs=FBgn0051106.3.path1,comp142923_c0_seq1.path1;transcripts=FBgn0051106.3.mrna1,comp142923_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152800800	152810236	.	-	.	ID=FBgn0051106.3.mrna1;geneID=FBgn0051106.3.path1;Name=FBgn0051106.3;Dir=sensecoverage=82.7;identity=99.1;matches=1281;mismatches=12;indels=0;unknowns=0;locus=RLOC_00022828
Chr2	stalkie_big_nohaplotig	exon	152800800	152800831	100	-	.	Parent=FBgn0051106.3.mrna1;Target=FBgn0051106.3 1532 1563 +
Chr2	stalkie_big_nohaplotig	exon	152800897	152801024	98	-	.	Parent=FBgn0051106.3.mrna1;Target=FBgn0051106.3 1404 1531 +
Chr2	stalkie_big_nohaplotig	exon	152801085	152801368	99	-	.	Parent=FBgn0051106.3.mrna1;Target=FBgn0051106.3 1120 1403 +
Chr2	stalkie_big_nohaplotig	exon	152801447	152801573	98	-	.	Parent=FBgn0051106.3.mrna1;Target=FBgn0051106.3 993 1119 +
Chr2	stalkie_big_nohaplotig	exon	152801629	152801736	98	-	.	Parent=FBgn0051106.3.mrna1;Target=FBgn0051106.3 885 992 +
Chr2	stalkie_big_nohaplotig	exon	152801810	152802116	99	-	.	Parent=FBgn0051106.3.mrna1;Target=FBgn0051106.3 578 884 +
Chr2	stalkie_big_nohaplotig	exon	152803375	152803496	100	-	.	Parent=FBgn0051106.3.mrna1;Target=FBgn0051106.3 456 577 +
Chr2	stalkie_big_nohaplotig	exon	152804184	152804347	99	-	.	Parent=FBgn0051106.3.mrna1;Target=FBgn0051106.3 292 455 +
Chr2	stalkie_big_nohaplotig	exon	152805081	152805089	100	-	.	Parent=FBgn0051106.3.mrna1;Target=FBgn0051106.3 283 291 +
Chr2	stalkie_big_nohaplotig	exon	152810225	152810236	83	-	.	Parent=FBgn0051106.3.mrna1;Target=FBgn0051106.3 271 282 +
Chr2	stalkie_big_nohaplotig	CDS	152800800	152800831	.	-	2	Parent=FBgn0051106.3.mrna1;Target=FBgn0051106.3 1532 1563 +
Chr2	stalkie_big_nohaplotig	CDS	152800897	152801024	.	-	1	Parent=FBgn0051106.3.mrna1;Target=FBgn0051106.3 1404 1531 +
Chr2	stalkie_big_nohaplotig	CDS	152801085	152801368	.	-	0	Parent=FBgn0051106.3.mrna1;Target=FBgn0051106.3 1120 1403 +
Chr2	stalkie_big_nohaplotig	CDS	152801447	152801573	.	-	1	Parent=FBgn0051106.3.mrna1;Target=FBgn0051106.3 993 1119 +
Chr2	stalkie_big_nohaplotig	CDS	152801629	152801736	.	-	1	Parent=FBgn0051106.3.mrna1;Target=FBgn0051106.3 885 992 +
Chr2	stalkie_big_nohaplotig	CDS	152801810	152802116	.	-	2	Parent=FBgn0051106.3.mrna1;Target=FBgn0051106.3 578 884 +
Chr2	stalkie_big_nohaplotig	CDS	152803375	152803496	.	-	1	Parent=FBgn0051106.3.mrna1;Target=FBgn0051106.3 456 577 +
Chr2	stalkie_big_nohaplotig	CDS	152804184	152804347	.	-	0	Parent=FBgn0051106.3.mrna1;Target=FBgn0051106.3 292 455 +
Chr2	stalkie_big_nohaplotig	CDS	152805081	152805089	.	-	0	Parent=FBgn0051106.3.mrna1;Target=FBgn0051106.3 283 291 +
Chr2	stalkie_big_nohaplotig	CDS	152810225	152810236	.	-	0	Parent=FBgn0051106.3.mrna1;Target=FBgn0051106.3 271 282 +
Chr2	stalkie_big_nohaplotig	mRNA	152802095	152803113	.	+	.	ID=comp142923_c0_seq1.mrna1;geneID=comp142923_c0_seq1.path1;Name=comp142923_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.5;matches=998;mismatches=20;indels=6;unknowns=0;Target=comp142923_c0_seq1 1023 1 .;CDS_Target=comp142923_c0_seq1 672 577 .;locus=RLOC_00022828
Chr2	stalkie_big_nohaplotig	exon	152802095	152803113	97	+	.	Parent=comp142923_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152802671	152802766	.	+	0	Parent=comp142923_c0_seq1.mrna1
Chr2	gffcl	locus	152805473	152822236	.	+	.	ID=RLOC_00022829;geneIDs=comp162176_c2_seq1.path1;transcripts=comp162176_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152805473	152822236	.	+	.	ID=comp162176_c2_seq1.mrna1;geneID=comp162176_c2_seq1.path1;Name=comp162176_c2_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=2074;mismatches=10;indels=2;unknowns=0;Target=comp162176_c2_seq1 1723 2085 +;locus=RLOC_00022829
Chr2	stalkie_big_nohaplotig	exon	152805473	152806083	99	+	.	Parent=comp162176_c2_seq1.mrna1;Target=comp162176_c2_seq1 2 612 +
Chr2	stalkie_big_nohaplotig	exon	152820764	152822236	99	+	.	Parent=comp162176_c2_seq1.mrna1;Target=comp162176_c2_seq1 613 2087 +
Chr2	stalkie_big_nohaplotig	CDS	152821872	152822234	.	+	0	Parent=comp162176_c2_seq1.mrna1
Chr2	gffcl	locus	152865971	152867069	.	-	.	ID=RLOC_00022830;geneIDs=FBgn0051463.1.path1;transcripts=FBgn0051463.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152865971	152867069	.	-	.	ID=FBgn0051463.1.mrna1;geneID=FBgn0051463.1.path1;Name=FBgn0051463.1;Dir=sensecoverage=100.0;identity=99.2;matches=1027;mismatches=8;indels=0;unknowns=0;locus=RLOC_00022830
Chr2	stalkie_big_nohaplotig	exon	152865971	152866948	99	-	.	Parent=FBgn0051463.1.mrna1;Target=FBgn0051463.1 58 1035 +
Chr2	stalkie_big_nohaplotig	exon	152867013	152867069	100	-	.	Parent=FBgn0051463.1.mrna1;Target=FBgn0051463.1 1 57 +
Chr2	stalkie_big_nohaplotig	CDS	152865971	152866948	.	-	0	Parent=FBgn0051463.1.mrna1;Target=FBgn0051463.1 58 1035 +
Chr2	stalkie_big_nohaplotig	CDS	152867013	152867069	.	-	0	Parent=FBgn0051463.1.mrna1;Target=FBgn0051463.1 1 57 +
Chr2	gffcl	locus	152906892	152910654	.	+	.	ID=RLOC_00022831;geneIDs=FBgn0028381.1.path1;transcripts=FBgn0028381.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152906892	152910654	.	+	.	ID=FBgn0028381.1.mrna1;geneID=FBgn0028381.1.path1;Name=FBgn0028381.1;Dir=sensecoverage=100.0;identity=99.1;matches=838;mismatches=7;indels=1;unknowns=0;Target=FBgn0028381.1 3 152 +;locus=RLOC_00022831
Chr2	stalkie_big_nohaplotig	exon	152906892	152907134	98	+	.	Parent=FBgn0028381.1.mrna1;Target=FBgn0028381.1 1 244 +
Chr2	stalkie_big_nohaplotig	exon	152908429	152908604	98	+	.	Parent=FBgn0028381.1.mrna1;Target=FBgn0028381.1 245 420 +
Chr2	stalkie_big_nohaplotig	exon	152910176	152910341	99	+	.	Parent=FBgn0028381.1.mrna1;Target=FBgn0028381.1 421 586 +
Chr2	stalkie_big_nohaplotig	exon	152910395	152910654	99	+	.	Parent=FBgn0028381.1.mrna1;Target=FBgn0028381.1 587 846 +
Chr2	stalkie_big_nohaplotig	CDS	152906894	152907042	.	+	0	Parent=FBgn0028381.1.mrna1
Chr2	gffcl	locus	152935950	152936396	.	-	.	ID=RLOC_00022832;geneIDs=FBgn0001149.5.path1;transcripts=FBgn0001149.5.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152935950	152936396	.	-	.	ID=FBgn0001149.5.mrna1;geneID=FBgn0001149.5.path1;Name=FBgn0001149.5;Dir=indeterminatecoverage=100.0;identity=99.1;matches=443;mismatches=4;indels=0;unknowns=0;Target=FBgn0001149.5 447 1 .;locus=RLOC_00022832
Chr2	stalkie_big_nohaplotig	exon	152935950	152936396	99	-	.	Parent=FBgn0001149.5.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152935950	152936396	.	-	0	Parent=FBgn0001149.5.mrna1
Chr2	gffcl	locus	152938088	152938726	.	-	.	ID=RLOC_00022833;geneIDs=FBgn0001149.2.path1;transcripts=FBgn0001149.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152938088	152938726	.	-	.	ID=FBgn0001149.2.mrna1;geneID=FBgn0001149.2.path1;Name=FBgn0001149.2;Dir=indeterminatecoverage=100.0;identity=99.4;matches=635;mismatches=4;indels=0;unknowns=0;Target=FBgn0001149.2 639 1 .;locus=RLOC_00022833
Chr2	stalkie_big_nohaplotig	exon	152938088	152938726	99	-	.	Parent=FBgn0001149.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152938088	152938726	.	-	0	Parent=FBgn0001149.2.mrna1
Chr2	gffcl	locus	152941408	152942197	.	-	.	ID=RLOC_00022834;geneIDs=FBgn0001149.4.path1;transcripts=FBgn0001149.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152941408	152942197	.	-	.	ID=FBgn0001149.4.mrna1;geneID=FBgn0001149.4.path1;Name=FBgn0001149.4;Dir=sensecoverage=100.0;identity=99.0;matches=680;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022834
Chr2	stalkie_big_nohaplotig	exon	152941408	152942052	98	-	.	Parent=FBgn0001149.4.mrna1;Target=FBgn0001149.4 43 687 +
Chr2	stalkie_big_nohaplotig	exon	152942156	152942197	100	-	.	Parent=FBgn0001149.4.mrna1;Target=FBgn0001149.4 1 42 +
Chr2	stalkie_big_nohaplotig	CDS	152941408	152942052	.	-	0	Parent=FBgn0001149.4.mrna1;Target=FBgn0001149.4 43 687 +
Chr2	stalkie_big_nohaplotig	CDS	152942156	152942197	.	-	0	Parent=FBgn0001149.4.mrna1;Target=FBgn0001149.4 1 42 +
Chr2	gffcl	locus	152944645	152945599	.	-	.	ID=RLOC_00022835;geneIDs=FBgn0001149.3.path1;transcripts=FBgn0001149.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152944645	152945599	.	-	.	ID=FBgn0001149.3.mrna1;geneID=FBgn0001149.3.path1;Name=FBgn0001149.3;Dir=sensecoverage=100.0;identity=98.8;matches=685;mismatches=8;indels=0;unknowns=0;locus=RLOC_00022835
Chr2	stalkie_big_nohaplotig	exon	152944645	152945289	98	-	.	Parent=FBgn0001149.3.mrna1;Target=FBgn0001149.3 49 693 +
Chr2	stalkie_big_nohaplotig	exon	152945552	152945599	100	-	.	Parent=FBgn0001149.3.mrna1;Target=FBgn0001149.3 1 48 +
Chr2	stalkie_big_nohaplotig	CDS	152944645	152945289	.	-	0	Parent=FBgn0001149.3.mrna1;Target=FBgn0001149.3 49 693 +
Chr2	stalkie_big_nohaplotig	CDS	152945552	152945599	.	-	0	Parent=FBgn0001149.3.mrna1;Target=FBgn0001149.3 1 48 +
Chr2	gffcl	locus	152948370	152948612	.	-	.	ID=RLOC_00022836;geneIDs=comp143424_c0_seq1.path1;transcripts=comp143424_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152948370	152948612	.	-	.	ID=comp143424_c0_seq1.mrna1;geneID=comp143424_c0_seq1.path1;Name=comp143424_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.6;matches=242;mismatches=1;indels=0;unknowns=0;Target=comp143424_c0_seq1 243 1 .;CDS_Target=comp143424_c0_seq1 124 2 .;locus=RLOC_00022836
Chr2	stalkie_big_nohaplotig	exon	152948370	152948612	99	-	.	Parent=comp143424_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152948489	152948611	.	-	0	Parent=comp143424_c0_seq1.mrna1
Chr2	gffcl	locus	152948622	152948846	.	-	.	ID=RLOC_00022837;geneIDs=Dp_FBgn0070090.path1;transcripts=Dp_FBgn0070090.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152948622	152948846	.	-	.	ID=Dp_FBgn0070090.mrna1;geneID=Dp_FBgn0070090.path1;Name=Dp_FBgn0070090;Dir=indeterminatecoverage=100.0;identity=100.0;matches=225;mismatches=0;indels=0;unknowns=0;Target=Dp_FBgn0070090 225 1 .;locus=RLOC_00022837
Chr2	stalkie_big_nohaplotig	exon	152948622	152948846	100	-	.	Parent=Dp_FBgn0070090.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152948622	152948846	.	-	0	Parent=Dp_FBgn0070090.mrna1
Chr2	gffcl	locus	152957592	152958785	.	.	.	ID=RLOC_00022838;geneIDs=FBgn0001149.1.path1,comp149464_c0_seq1.path1;transcripts=FBgn0001149.1.mrna1,comp149464_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152957592	152958785	.	-	.	ID=FBgn0001149.1.mrna1;geneID=FBgn0001149.1.path1;Name=FBgn0001149.1;Dir=sensecoverage=100.0;identity=99.1;matches=664;mismatches=5;indels=1;unknowns=0;Target=FBgn0001149.1 47 94 +;locus=RLOC_00022838
Chr2	stalkie_big_nohaplotig	exon	152957592	152958237	99	-	.	Parent=FBgn0001149.1.mrna1;Target=FBgn0001149.1 25 669 +
Chr2	stalkie_big_nohaplotig	exon	152958762	152958785	91	-	.	Parent=FBgn0001149.1.mrna1;Target=FBgn0001149.1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	152958167	152958214	.	-	0	Parent=FBgn0001149.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152958216	152958706	.	+	.	ID=comp149464_c0_seq1.mrna1;geneID=comp149464_c0_seq1.path1;Name=comp149464_c0_seq1;Dir=indeterminatecoverage=99.4;identity=97.0;matches=477;mismatches=14;indels=1;unknowns=0;Target=comp149464_c0_seq1 494 3 .;CDS_Target=comp149464_c0_seq1 440 345 .;locus=RLOC_00022838
Chr2	stalkie_big_nohaplotig	exon	152958216	152958706	96	+	.	Parent=comp149464_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	152958558	152958653	.	+	0	Parent=comp149464_c0_seq1.mrna1
Chr2	gffcl	locus	152971232	152974451	.	+	.	ID=RLOC_00022839;geneIDs=FBgn0038029.1.path1;transcripts=FBgn0038029.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152971232	152974451	.	+	.	ID=FBgn0038029.1.mrna1;geneID=FBgn0038029.1.path1;Name=FBgn0038029.1;Dir=sensecoverage=100.0;identity=100.0;matches=750;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022839
Chr2	stalkie_big_nohaplotig	exon	152971232	152971317	100	+	.	Parent=FBgn0038029.1.mrna1;Target=FBgn0038029.1 1 86 +
Chr2	stalkie_big_nohaplotig	exon	152972054	152972263	100	+	.	Parent=FBgn0038029.1.mrna1;Target=FBgn0038029.1 87 296 +
Chr2	stalkie_big_nohaplotig	exon	152973288	152973429	100	+	.	Parent=FBgn0038029.1.mrna1;Target=FBgn0038029.1 297 438 +
Chr2	stalkie_big_nohaplotig	exon	152973981	152974071	100	+	.	Parent=FBgn0038029.1.mrna1;Target=FBgn0038029.1 439 529 +
Chr2	stalkie_big_nohaplotig	exon	152974174	152974334	100	+	.	Parent=FBgn0038029.1.mrna1;Target=FBgn0038029.1 530 690 +
Chr2	stalkie_big_nohaplotig	exon	152974392	152974451	100	+	.	Parent=FBgn0038029.1.mrna1;Target=FBgn0038029.1 691 750 +
Chr2	stalkie_big_nohaplotig	CDS	152971232	152971317	.	+	0	Parent=FBgn0038029.1.mrna1;Target=FBgn0038029.1 1 86 +
Chr2	stalkie_big_nohaplotig	CDS	152972054	152972263	.	+	1	Parent=FBgn0038029.1.mrna1;Target=FBgn0038029.1 87 296 +
Chr2	stalkie_big_nohaplotig	CDS	152973288	152973429	.	+	1	Parent=FBgn0038029.1.mrna1;Target=FBgn0038029.1 297 438 +
Chr2	stalkie_big_nohaplotig	CDS	152973981	152974071	.	+	0	Parent=FBgn0038029.1.mrna1;Target=FBgn0038029.1 439 529 +
Chr2	stalkie_big_nohaplotig	CDS	152974174	152974334	.	+	2	Parent=FBgn0038029.1.mrna1;Target=FBgn0038029.1 530 690 +
Chr2	stalkie_big_nohaplotig	CDS	152974392	152974451	.	+	0	Parent=FBgn0038029.1.mrna1;Target=FBgn0038029.1 691 750 +
Chr2	gffcl	locus	152981675	152983214	.	+	.	ID=RLOC_00022840;geneIDs=FBgn0053098.1.path1;transcripts=FBgn0053098.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152981675	152983214	.	+	.	ID=FBgn0053098.1.mrna1;geneID=FBgn0053098.1.path1;Name=FBgn0053098.1;Dir=sensecoverage=100.0;identity=98.6;matches=705;mismatches=8;indels=2;unknowns=0;locus=RLOC_00022840
Chr2	stalkie_big_nohaplotig	exon	152981675	152981734	98	+	.	Parent=FBgn0053098.1.mrna1;Target=FBgn0053098.1 1 60 +
Chr2	stalkie_big_nohaplotig	exon	152981810	152982025	98	+	.	Parent=FBgn0053098.1.mrna1;Target=FBgn0053098.1 61 276 +
Chr2	stalkie_big_nohaplotig	exon	152982094	152982213	97	+	.	Parent=FBgn0053098.1.mrna1;Target=FBgn0053098.1 277 396 +
Chr2	stalkie_big_nohaplotig	exon	152982294	152982430	100	+	.	Parent=FBgn0053098.1.mrna1;Target=FBgn0053098.1 397 533 +
Chr2	stalkie_big_nohaplotig	exon	152983034	152983214	98	+	.	Parent=FBgn0053098.1.mrna1;Target=FBgn0053098.1 534 714 +
Chr2	stalkie_big_nohaplotig	CDS	152981675	152981734	.	+	0	Parent=FBgn0053098.1.mrna1;Target=FBgn0053098.1 1 60 +
Chr2	stalkie_big_nohaplotig	CDS	152981810	152982025	.	+	0	Parent=FBgn0053098.1.mrna1;Target=FBgn0053098.1 61 276 +
Chr2	stalkie_big_nohaplotig	CDS	152982094	152982213	.	+	0	Parent=FBgn0053098.1.mrna1;Target=FBgn0053098.1 277 396 +
Chr2	stalkie_big_nohaplotig	CDS	152982294	152982430	.	+	0	Parent=FBgn0053098.1.mrna1;Target=FBgn0053098.1 397 533 +
Chr2	stalkie_big_nohaplotig	CDS	152983034	152983214	.	+	1	Parent=FBgn0053098.1.mrna1;Target=FBgn0053098.1 534 714 +
Chr2	gffcl	locus	152983406	153037153	.	+	.	ID=RLOC_00022841;geneIDs=FBgn0085431.1.path1;transcripts=FBgn0085431.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152983406	153037153	.	+	.	ID=FBgn0085431.1.mrna1;geneID=FBgn0085431.1.path1;Name=FBgn0085431.1;Dir=sensecoverage=100.0;identity=99.1;matches=1986;mismatches=18;indels=0;unknowns=0;locus=RLOC_00022841
Chr2	stalkie_big_nohaplotig	exon	152983406	152983853	99	+	.	Parent=FBgn0085431.1.mrna1;Target=FBgn0085431.1 1 448 +
Chr2	stalkie_big_nohaplotig	exon	152984992	152985163	97	+	.	Parent=FBgn0085431.1.mrna1;Target=FBgn0085431.1 449 620 +
Chr2	stalkie_big_nohaplotig	exon	152985254	152985313	98	+	.	Parent=FBgn0085431.1.mrna1;Target=FBgn0085431.1 621 680 +
Chr2	stalkie_big_nohaplotig	exon	152985408	152985679	98	+	.	Parent=FBgn0085431.1.mrna1;Target=FBgn0085431.1 681 952 +
Chr2	stalkie_big_nohaplotig	exon	152985756	152985851	100	+	.	Parent=FBgn0085431.1.mrna1;Target=FBgn0085431.1 953 1048 +
Chr2	stalkie_big_nohaplotig	exon	153036003	153036181	98	+	.	Parent=FBgn0085431.1.mrna1;Target=FBgn0085431.1 1049 1227 +
Chr2	stalkie_big_nohaplotig	exon	153036257	153036509	99	+	.	Parent=FBgn0085431.1.mrna1;Target=FBgn0085431.1 1228 1480 +
Chr2	stalkie_big_nohaplotig	exon	153036568	153036772	99	+	.	Parent=FBgn0085431.1.mrna1;Target=FBgn0085431.1 1481 1685 +
Chr2	stalkie_big_nohaplotig	exon	153036835	153037153	100	+	.	Parent=FBgn0085431.1.mrna1;Target=FBgn0085431.1 1686 2004 +
Chr2	stalkie_big_nohaplotig	CDS	152983406	152983853	.	+	0	Parent=FBgn0085431.1.mrna1;Target=FBgn0085431.1 1 448 +
Chr2	stalkie_big_nohaplotig	CDS	152984992	152985163	.	+	2	Parent=FBgn0085431.1.mrna1;Target=FBgn0085431.1 449 620 +
Chr2	stalkie_big_nohaplotig	CDS	152985254	152985313	.	+	1	Parent=FBgn0085431.1.mrna1;Target=FBgn0085431.1 621 680 +
Chr2	stalkie_big_nohaplotig	CDS	152985408	152985679	.	+	1	Parent=FBgn0085431.1.mrna1;Target=FBgn0085431.1 681 952 +
Chr2	stalkie_big_nohaplotig	CDS	152985756	152985851	.	+	2	Parent=FBgn0085431.1.mrna1;Target=FBgn0085431.1 953 1048 +
Chr2	stalkie_big_nohaplotig	CDS	153036003	153036181	.	+	2	Parent=FBgn0085431.1.mrna1;Target=FBgn0085431.1 1049 1227 +
Chr2	stalkie_big_nohaplotig	CDS	153036257	153036509	.	+	0	Parent=FBgn0085431.1.mrna1;Target=FBgn0085431.1 1228 1480 +
Chr2	stalkie_big_nohaplotig	CDS	153036568	153036772	.	+	2	Parent=FBgn0085431.1.mrna1;Target=FBgn0085431.1 1481 1685 +
Chr2	stalkie_big_nohaplotig	CDS	153036835	153037153	.	+	1	Parent=FBgn0085431.1.mrna1;Target=FBgn0085431.1 1686 2004 +
Chr2	gffcl	locus	152994011	152995714	.	-	.	ID=RLOC_00022842;geneIDs=FBgn0038449.1.path1;transcripts=FBgn0038449.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	152994011	152995714	.	-	.	ID=FBgn0038449.1.mrna1;geneID=FBgn0038449.1.path1;Name=FBgn0038449.1;Dir=sensecoverage=100.0;identity=98.8;matches=1195;mismatches=13;indels=1;unknowns=0;locus=RLOC_00022842
Chr2	stalkie_big_nohaplotig	exon	152994011	152994070	98	-	.	Parent=FBgn0038449.1.mrna1;Target=FBgn0038449.1 1149 1209 +
Chr2	stalkie_big_nohaplotig	exon	152994147	152994389	98	-	.	Parent=FBgn0038449.1.mrna1;Target=FBgn0038449.1 906 1148 +
Chr2	stalkie_big_nohaplotig	exon	152994460	152994652	99	-	.	Parent=FBgn0038449.1.mrna1;Target=FBgn0038449.1 713 905 +
Chr2	stalkie_big_nohaplotig	exon	152994716	152994971	98	-	.	Parent=FBgn0038449.1.mrna1;Target=FBgn0038449.1 457 712 +
Chr2	stalkie_big_nohaplotig	exon	152995094	152995342	98	-	.	Parent=FBgn0038449.1.mrna1;Target=FBgn0038449.1 208 456 +
Chr2	stalkie_big_nohaplotig	exon	152995404	152995516	99	-	.	Parent=FBgn0038449.1.mrna1;Target=FBgn0038449.1 95 207 +
Chr2	stalkie_big_nohaplotig	exon	152995621	152995714	98	-	.	Parent=FBgn0038449.1.mrna1;Target=FBgn0038449.1 1 94 +
Chr2	stalkie_big_nohaplotig	CDS	152994011	152994070	.	-	1	Parent=FBgn0038449.1.mrna1;Target=FBgn0038449.1 1149 1209 +
Chr2	stalkie_big_nohaplotig	CDS	152994147	152994389	.	-	1	Parent=FBgn0038449.1.mrna1;Target=FBgn0038449.1 906 1148 +
Chr2	stalkie_big_nohaplotig	CDS	152994460	152994652	.	-	2	Parent=FBgn0038449.1.mrna1;Target=FBgn0038449.1 713 905 +
Chr2	stalkie_big_nohaplotig	CDS	152994716	152994971	.	-	0	Parent=FBgn0038449.1.mrna1;Target=FBgn0038449.1 457 712 +
Chr2	stalkie_big_nohaplotig	CDS	152995094	152995342	.	-	0	Parent=FBgn0038449.1.mrna1;Target=FBgn0038449.1 208 456 +
Chr2	stalkie_big_nohaplotig	CDS	152995404	152995516	.	-	2	Parent=FBgn0038449.1.mrna1;Target=FBgn0038449.1 95 207 +
Chr2	stalkie_big_nohaplotig	CDS	152995621	152995714	.	-	0	Parent=FBgn0038449.1.mrna1;Target=FBgn0038449.1 1 94 +
Chr2	gffcl	locus	153001881	153003079	.	-	.	ID=RLOC_00022843;geneIDs=FBgn0038032.path1;transcripts=FBgn0038032.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153001881	153003079	.	-	.	ID=FBgn0038032.mrna1;geneID=FBgn0038032.path1;Name=FBgn0038032;Dir=sensecoverage=100.0;identity=99.5;matches=808;mismatches=4;indels=0;unknowns=1;locus=RLOC_00022843
Chr2	stalkie_big_nohaplotig	exon	153001881	153001974	98	-	.	Parent=FBgn0038032.mrna1;Target=FBgn0038032 720 813 +
Chr2	stalkie_big_nohaplotig	exon	153002118	153002375	100	-	.	Parent=FBgn0038032.mrna1;Target=FBgn0038032 462 719 +
Chr2	stalkie_big_nohaplotig	exon	153002469	153002711	98	-	.	Parent=FBgn0038032.mrna1;Target=FBgn0038032 219 461 +
Chr2	stalkie_big_nohaplotig	exon	153002792	153002977	100	-	.	Parent=FBgn0038032.mrna1;Target=FBgn0038032 33 218 +
Chr2	stalkie_big_nohaplotig	exon	153003048	153003079	100	-	.	Parent=FBgn0038032.mrna1;Target=FBgn0038032 1 32 +
Chr2	stalkie_big_nohaplotig	CDS	153001881	153001974	.	-	1	Parent=FBgn0038032.mrna1;Target=FBgn0038032 720 813 +
Chr2	stalkie_big_nohaplotig	CDS	153002118	153002375	.	-	1	Parent=FBgn0038032.mrna1;Target=FBgn0038032 462 719 +
Chr2	stalkie_big_nohaplotig	CDS	153002469	153002711	.	-	1	Parent=FBgn0038032.mrna1;Target=FBgn0038032 219 461 +
Chr2	stalkie_big_nohaplotig	CDS	153002792	153002977	.	-	1	Parent=FBgn0038032.mrna1;Target=FBgn0038032 33 218 +
Chr2	stalkie_big_nohaplotig	CDS	153003048	153003079	.	-	0	Parent=FBgn0038032.mrna1;Target=FBgn0038032 1 32 +
Chr2	gffcl	locus	153003187	153009134	.	-	.	ID=RLOC_00022844;geneIDs=FBgn0038450.path1;transcripts=FBgn0038450.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153003187	153009134	.	-	.	ID=FBgn0038450.mrna1;geneID=FBgn0038450.path1;Name=FBgn0038450;Dir=sensecoverage=100.0;identity=99.6;matches=562;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022844
Chr2	stalkie_big_nohaplotig	exon	153003187	153003309	100	-	.	Parent=FBgn0038450.mrna1;Target=FBgn0038450 442 564 +
Chr2	stalkie_big_nohaplotig	exon	153003380	153003628	99	-	.	Parent=FBgn0038450.mrna1;Target=FBgn0038450 193 441 +
Chr2	stalkie_big_nohaplotig	exon	153003711	153003823	99	-	.	Parent=FBgn0038450.mrna1;Target=FBgn0038450 80 192 +
Chr2	stalkie_big_nohaplotig	exon	153009056	153009134	100	-	.	Parent=FBgn0038450.mrna1;Target=FBgn0038450 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	153003187	153003309	.	-	0	Parent=FBgn0038450.mrna1;Target=FBgn0038450 442 564 +
Chr2	stalkie_big_nohaplotig	CDS	153003380	153003628	.	-	0	Parent=FBgn0038450.mrna1;Target=FBgn0038450 193 441 +
Chr2	stalkie_big_nohaplotig	CDS	153003711	153003823	.	-	2	Parent=FBgn0038450.mrna1;Target=FBgn0038450 80 192 +
Chr2	stalkie_big_nohaplotig	CDS	153009056	153009134	.	-	0	Parent=FBgn0038450.mrna1;Target=FBgn0038450 1 79 +
Chr2	gffcl	locus	153015256	153396915	.	.	.	ID=RLOC_00022845;geneIDs=FBgn0037698.1.path1,FBgn0046685.1.path1,comp72226_c0_seq1.path1,comp145123_c0_seq1.path1,comp160647_c0_seq1.path1,comp161428_c0_seq1.path1;transcripts=comp161428_c0_seq1.mrna1,comp145123_c0_seq1.mrna1,FBgn0046685.1.mrna1,FBgn0037698.1.mrna1,comp160647_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153015256	153396915	.	+	.	ID=comp161428_c0_seq1.mrna1;geneID=comp161428_c0_seq1.path1;Name=comp161428_c0_seq1;Dir=antisensecoverage=80.1;identity=97.6;matches=786;mismatches=14;indels=5;unknowns=0;locus=RLOC_00022845
Chr2	stalkie_big_nohaplotig	exon	153015256	153015262	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 905 911 -
Chr2	stalkie_big_nohaplotig	exon	153017142	153017149	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 897 904 -
Chr2	stalkie_big_nohaplotig	exon	153025097	153025104	87	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 889 896 -
Chr2	stalkie_big_nohaplotig	exon	153033144	153033150	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 874 880 -
Chr2	stalkie_big_nohaplotig	exon	153066519	153066526	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 844 851 -
Chr2	stalkie_big_nohaplotig	exon	153066569	153066579	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 784 794 -
Chr2	stalkie_big_nohaplotig	exon	153075977	153075981	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 779 783 -
Chr2	stalkie_big_nohaplotig	exon	153197919	153197927	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 770 778 -
Chr2	stalkie_big_nohaplotig	exon	153201443	153201447	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 765 769 -
Chr2	stalkie_big_nohaplotig	exon	153206310	153206316	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 758 764 -
Chr2	stalkie_big_nohaplotig	exon	153209177	153209180	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 754 757 -
Chr2	stalkie_big_nohaplotig	exon	153222047	153222054	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 735 742 -
Chr2	stalkie_big_nohaplotig	exon	153238083	153238093	90	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 717 727 -
Chr2	stalkie_big_nohaplotig	exon	153239001	153239009	77	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 708 716 -
Chr2	stalkie_big_nohaplotig	exon	153243344	153243349	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 702 707 -
Chr2	stalkie_big_nohaplotig	exon	153264722	153264728	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 695 701 -
Chr2	stalkie_big_nohaplotig	exon	153270008	153270016	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 674 682 -
Chr2	stalkie_big_nohaplotig	exon	153276242	153276249	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 666 673 -
Chr2	stalkie_big_nohaplotig	exon	153278085	153278086	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 664 665 -
Chr2	stalkie_big_nohaplotig	exon	153291770	153291776	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 655 661 -
Chr2	stalkie_big_nohaplotig	exon	153331877	153331878	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 653 654 -
Chr2	stalkie_big_nohaplotig	exon	153339088	153339101	85	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 639 652 -
Chr2	stalkie_big_nohaplotig	exon	153339585	153339590	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 633 638 -
Chr2	stalkie_big_nohaplotig	exon	153344936	153344942	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 626 632 -
Chr2	stalkie_big_nohaplotig	exon	153349230	153349235	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 620 625 -
Chr2	stalkie_big_nohaplotig	exon	153357758	153357765	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 612 619 -
Chr2	stalkie_big_nohaplotig	exon	153362658	153362659	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 610 611 -
Chr2	stalkie_big_nohaplotig	exon	153370617	153370621	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 605 609 -
Chr2	stalkie_big_nohaplotig	exon	153373991	153373993	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 602 604 -
Chr2	stalkie_big_nohaplotig	exon	153375990	153375991	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 600 601 -
Chr2	stalkie_big_nohaplotig	exon	153381647	153381651	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 595 599 -
Chr2	stalkie_big_nohaplotig	exon	153388852	153388853	100	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 593 594 -
Chr2	stalkie_big_nohaplotig	exon	153396329	153396915	97	+	.	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 1 592 -
Chr2	stalkie_big_nohaplotig	CDS	153015257	153015262	.	+	0	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 905 910 .
Chr2	stalkie_big_nohaplotig	CDS	153017142	153017149	.	+	0	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 897 904 .
Chr2	stalkie_big_nohaplotig	CDS	153025097	153025104	.	+	1	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 889 896 .
Chr2	stalkie_big_nohaplotig	CDS	153033144	153033150	.	+	2	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 874 880 .
Chr2	stalkie_big_nohaplotig	CDS	153066519	153066526	.	+	1	Parent=comp161428_c0_seq1.mrna1;Target=comp161428_c0_seq1 844 851 .
Chr2	stalkie_big_nohaplotig	mRNA	153066101	153067116	.	-	.	ID=comp145123_c0_seq1.mrna1;geneID=comp145123_c0_seq1.path1;Name=comp145123_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.6;matches=981;mismatches=21;indels=14;unknowns=0;Target=comp145123_c0_seq1 1002 1 .;CDS_Target=comp145123_c0_seq1 534 379 .;locus=RLOC_00022845
Chr2	stalkie_big_nohaplotig	exon	153066101	153067116	96	-	.	Parent=comp145123_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153066569	153066737	.	-	0	Parent=comp145123_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153338623	153341152	.	+	.	ID=FBgn0046685.1.mrna1;geneID=FBgn0046685.1.path1;Name=FBgn0046685.1;Dir=sensecoverage=100.0;identity=99.5;matches=2450;mismatches=13;indels=0;unknowns=0;locus=RLOC_00022845
Chr2	stalkie_big_nohaplotig	exon	153338623	153339798	99	+	.	Parent=FBgn0046685.1.mrna1;Target=FBgn0046685.1 1 1176 +
Chr2	stalkie_big_nohaplotig	exon	153339866	153341152	99	+	.	Parent=FBgn0046685.1.mrna1;Target=FBgn0046685.1 1177 2463 +
Chr2	stalkie_big_nohaplotig	CDS	153338623	153339798	.	+	0	Parent=FBgn0046685.1.mrna1;Target=FBgn0046685.1 1 1176 +
Chr2	stalkie_big_nohaplotig	CDS	153339866	153341152	.	+	0	Parent=FBgn0046685.1.mrna1;Target=FBgn0046685.1 1177 2463 +
Chr2	stalkie_big_nohaplotig	mRNA	153366490	153381936	.	+	.	ID=FBgn0037698.1.mrna1;geneID=FBgn0037698.1.path1;Name=FBgn0037698.1;Dir=sensecoverage=100.0;identity=99.8;matches=3793;mismatches=8;indels=0;unknowns=0;locus=RLOC_00022845
Chr2	stalkie_big_nohaplotig	exon	153366490	153366528	100	+	.	Parent=FBgn0037698.1.mrna1;Target=FBgn0037698.1 1 39 +
Chr2	stalkie_big_nohaplotig	exon	153374265	153374490	100	+	.	Parent=FBgn0037698.1.mrna1;Target=FBgn0037698.1 40 265 +
Chr2	stalkie_big_nohaplotig	exon	153374560	153375161	100	+	.	Parent=FBgn0037698.1.mrna1;Target=FBgn0037698.1 266 867 +
Chr2	stalkie_big_nohaplotig	exon	153378691	153378809	100	+	.	Parent=FBgn0037698.1.mrna1;Target=FBgn0037698.1 868 986 +
Chr2	stalkie_big_nohaplotig	exon	153378863	153379065	99	+	.	Parent=FBgn0037698.1.mrna1;Target=FBgn0037698.1 987 1189 +
Chr2	stalkie_big_nohaplotig	exon	153379137	153379570	99	+	.	Parent=FBgn0037698.1.mrna1;Target=FBgn0037698.1 1190 1623 +
Chr2	stalkie_big_nohaplotig	exon	153379698	153380075	99	+	.	Parent=FBgn0037698.1.mrna1;Target=FBgn0037698.1 1624 2001 +
Chr2	stalkie_big_nohaplotig	exon	153380137	153381936	99	+	.	Parent=FBgn0037698.1.mrna1;Target=FBgn0037698.1 2002 3801 +
Chr2	stalkie_big_nohaplotig	CDS	153366490	153366528	.	+	0	Parent=FBgn0037698.1.mrna1;Target=FBgn0037698.1 1 39 +
Chr2	stalkie_big_nohaplotig	CDS	153374265	153374490	.	+	0	Parent=FBgn0037698.1.mrna1;Target=FBgn0037698.1 40 265 +
Chr2	stalkie_big_nohaplotig	CDS	153374560	153375161	.	+	2	Parent=FBgn0037698.1.mrna1;Target=FBgn0037698.1 266 867 +
Chr2	stalkie_big_nohaplotig	CDS	153378691	153378809	.	+	0	Parent=FBgn0037698.1.mrna1;Target=FBgn0037698.1 868 986 +
Chr2	stalkie_big_nohaplotig	CDS	153378863	153379065	.	+	1	Parent=FBgn0037698.1.mrna1;Target=FBgn0037698.1 987 1189 +
Chr2	stalkie_big_nohaplotig	CDS	153379137	153379570	.	+	2	Parent=FBgn0037698.1.mrna1;Target=FBgn0037698.1 1190 1623 +
Chr2	stalkie_big_nohaplotig	CDS	153379698	153380075	.	+	0	Parent=FBgn0037698.1.mrna1;Target=FBgn0037698.1 1624 2001 +
Chr2	stalkie_big_nohaplotig	CDS	153380137	153381936	.	+	0	Parent=FBgn0037698.1.mrna1;Target=FBgn0037698.1 2002 3801 +
Chr2	stalkie_big_nohaplotig	mRNA	153387949	153389906	.	-	.	ID=comp160647_c0_seq1.mrna1;geneID=comp160647_c0_seq1.path1;Name=comp160647_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=1924;mismatches=33;indels=14;unknowns=0;Target=comp160647_c0_seq1 1970 1 .;CDS_Target=comp160647_c0_seq1 869 753 .;locus=RLOC_00022845
Chr2	stalkie_big_nohaplotig	exon	153387949	153389906	97	-	.	Parent=comp160647_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153389044	153389160	.	-	0	Parent=comp160647_c0_seq1.mrna1
Chr2	gffcl	locus	153020399	153030943	.	-	.	ID=RLOC_00022846;geneIDs=FBgn0038037.1.path1,FBgn0038037.2.path1;transcripts=FBgn0038037.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153020399	153030943	.	-	.	ID=FBgn0038037.2.mrna1;geneID=FBgn0038037.2.path1;Name=FBgn0038037.2;Dir=sensecoverage=89.1;identity=98.3;matches=1349;mismatches=23;indels=0;unknowns=0;locus=RLOC_00022846
Chr2	stalkie_big_nohaplotig	exon	153020399	153021050	97	-	.	Parent=FBgn0038037.2.mrna1;Target=FBgn0038037.2 721 1372 +
Chr2	stalkie_big_nohaplotig	exon	153029018	153029522	99	-	.	Parent=FBgn0038037.2.mrna1;Target=FBgn0038037.2 216 720 +
Chr2	stalkie_big_nohaplotig	exon	153030729	153030943	99	-	.	Parent=FBgn0038037.2.mrna1;Target=FBgn0038037.2 1 215 +
Chr2	stalkie_big_nohaplotig	CDS	153020399	153021050	.	-	0	Parent=FBgn0038037.2.mrna1;Target=FBgn0038037.2 721 1372 +
Chr2	stalkie_big_nohaplotig	CDS	153029018	153029522	.	-	1	Parent=FBgn0038037.2.mrna1;Target=FBgn0038037.2 216 720 +
Chr2	stalkie_big_nohaplotig	CDS	153030729	153030943	.	-	0	Parent=FBgn0038037.2.mrna1;Target=FBgn0038037.2 1 215 +
Chr2	gffcl	locus	153028062	153028228	.	-	.	ID=RLOC_00022847;geneIDs=FBgn0038037.2.path2;transcripts=FBgn0038037.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	153028062	153028228	.	-	.	ID=FBgn0038037.2.mrna2;geneID=FBgn0038037.2.path2;Name=FBgn0038037.2;Dir=indeterminatecoverage=10.9;identity=98.8;matches=165;mismatches=2;indels=0;unknowns=0;Target=FBgn0038037.2 1539 1373 .;locus=RLOC_00022847
Chr2	stalkie_big_nohaplotig	exon	153028062	153028228	98	-	.	Parent=FBgn0038037.2.mrna2
Chr2	stalkie_big_nohaplotig	CDS	153028062	153028228	.	-	1	Parent=FBgn0038037.2.mrna2
Chr2	gffcl	locus	153033389	153035961	.	-	.	ID=RLOC_00022848;geneIDs=FBgn0038035.1.path1;transcripts=FBgn0038035.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153033389	153035961	.	-	.	ID=FBgn0038035.1.mrna1;geneID=FBgn0038035.1.path1;Name=FBgn0038035.1;Dir=sensecoverage=99.9;identity=98.6;matches=2100;mismatches=30;indels=0;unknowns=0;locus=RLOC_00022848
Chr2	stalkie_big_nohaplotig	exon	153033389	153034234	97	-	.	Parent=FBgn0038035.1.mrna1;Target=FBgn0038035.1 1285 2130 +
Chr2	stalkie_big_nohaplotig	exon	153034294	153034414	99	-	.	Parent=FBgn0038035.1.mrna1;Target=FBgn0038035.1 1164 1284 +
Chr2	stalkie_big_nohaplotig	exon	153034477	153034658	98	-	.	Parent=FBgn0038035.1.mrna1;Target=FBgn0038035.1 982 1163 +
Chr2	stalkie_big_nohaplotig	exon	153034819	153034888	100	-	.	Parent=FBgn0038035.1.mrna1;Target=FBgn0038035.1 912 981 +
Chr2	stalkie_big_nohaplotig	exon	153034942	153035291	99	-	.	Parent=FBgn0038035.1.mrna1;Target=FBgn0038035.1 562 911 +
Chr2	stalkie_big_nohaplotig	exon	153035344	153035537	98	-	.	Parent=FBgn0038035.1.mrna1;Target=FBgn0038035.1 368 561 +
Chr2	stalkie_big_nohaplotig	exon	153035595	153035961	99	-	.	Parent=FBgn0038035.1.mrna1;Target=FBgn0038035.1 1 367 +
Chr2	stalkie_big_nohaplotig	CDS	153033389	153034234	.	-	0	Parent=FBgn0038035.1.mrna1;Target=FBgn0038035.1 1285 2130 +
Chr2	stalkie_big_nohaplotig	CDS	153034294	153034414	.	-	1	Parent=FBgn0038035.1.mrna1;Target=FBgn0038035.1 1164 1284 +
Chr2	stalkie_big_nohaplotig	CDS	153034477	153034658	.	-	0	Parent=FBgn0038035.1.mrna1;Target=FBgn0038035.1 982 1163 +
Chr2	stalkie_big_nohaplotig	CDS	153034819	153034888	.	-	1	Parent=FBgn0038035.1.mrna1;Target=FBgn0038035.1 912 981 +
Chr2	stalkie_big_nohaplotig	CDS	153034942	153035291	.	-	0	Parent=FBgn0038035.1.mrna1;Target=FBgn0038035.1 562 911 +
Chr2	stalkie_big_nohaplotig	CDS	153035344	153035537	.	-	2	Parent=FBgn0038035.1.mrna1;Target=FBgn0038035.1 368 561 +
Chr2	stalkie_big_nohaplotig	CDS	153035595	153035961	.	-	0	Parent=FBgn0038035.1.mrna1;Target=FBgn0038035.1 1 367 +
Chr2	stalkie_big_nohaplotig	mRNA	153049079	153050031	.	-	.	ID=comp148820_c0_seq1.mrna1;geneID=comp148820_c0_seq1.path1;Name=comp148820_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=925;mismatches=27;indels=1;unknowns=0;Target=comp148820_c0_seq1 952 1 .;CDS_Target=comp148820_c0_seq1 347 261 .;locus=RLOC_00022849
Chr2	stalkie_big_nohaplotig	exon	153049079	153050031	97	-	.	Parent=comp148820_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153049685	153049771	.	-	0	Parent=comp148820_c0_seq1.mrna1
Chr2	gffcl	locus	153050905	153051374	.	+	.	ID=RLOC_00022850;geneIDs=comp71932_c0_seq1.path1;transcripts=comp71932_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153050905	153051374	.	+	.	ID=comp71932_c0_seq1.mrna1;geneID=comp71932_c0_seq1.path1;Name=comp71932_c0_seq1;Dir=indeterminatecoverage=95.8;identity=94.3;matches=443;mismatches=14;indels=13;unknowns=0;Target=comp71932_c0_seq1 477 21 .;CDS_Target=comp71932_c0_seq1 257 93 .;locus=RLOC_00022850
Chr2	stalkie_big_nohaplotig	exon	153050905	153051374	94	+	.	Parent=comp71932_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153050990	153051154	.	+	0	Parent=comp71932_c0_seq1.mrna1
Chr2	gffcl	locus	153051668	153052607	.	-	.	ID=RLOC_00022851;geneIDs=comp156863_c0_seq1.path1;transcripts=comp156863_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153051668	153052607	.	-	.	ID=comp156863_c0_seq1.mrna1;geneID=comp156863_c0_seq1.path1;Name=comp156863_c0_seq1;Dir=indeterminatecoverage=79.3;identity=96.6;matches=908;mismatches=28;indels=4;unknowns=0;Target=comp156863_c0_seq1 936 1 .;CDS_Target=comp156863_c0_seq1 169 2 .;locus=RLOC_00022851
Chr2	stalkie_big_nohaplotig	exon	153051668	153052607	96	-	.	Parent=comp156863_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153052439	153052606	.	-	0	Parent=comp156863_c0_seq1.mrna1
Chr2	gffcl	locus	153054387	153055909	.	+	.	ID=RLOC_00022852;geneIDs=FBgn0039495.3.path1;transcripts=FBgn0039495.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153054387	153055909	.	+	.	ID=FBgn0039495.3.mrna1;geneID=FBgn0039495.3.path1;Name=FBgn0039495.3;Dir=sensecoverage=99.6;identity=98.7;matches=1103;mismatches=14;indels=0;unknowns=0;locus=RLOC_00022852
Chr2	stalkie_big_nohaplotig	exon	153054387	153054489	98	+	.	Parent=FBgn0039495.3.mrna1;Target=FBgn0039495.3 1 103 +
Chr2	stalkie_big_nohaplotig	exon	153054561	153054715	98	+	.	Parent=FBgn0039495.3.mrna1;Target=FBgn0039495.3 104 258 +
Chr2	stalkie_big_nohaplotig	exon	153054878	153055140	98	+	.	Parent=FBgn0039495.3.mrna1;Target=FBgn0039495.3 259 521 +
Chr2	stalkie_big_nohaplotig	exon	153055198	153055391	99	+	.	Parent=FBgn0039495.3.mrna1;Target=FBgn0039495.3 522 715 +
Chr2	stalkie_big_nohaplotig	exon	153055452	153055547	98	+	.	Parent=FBgn0039495.3.mrna1;Target=FBgn0039495.3 716 811 +
Chr2	stalkie_big_nohaplotig	exon	153055604	153055909	98	+	.	Parent=FBgn0039495.3.mrna1;Target=FBgn0039495.3 812 1117 +
Chr2	stalkie_big_nohaplotig	CDS	153054387	153054489	.	+	0	Parent=FBgn0039495.3.mrna1;Target=FBgn0039495.3 1 103 +
Chr2	stalkie_big_nohaplotig	CDS	153054561	153054715	.	+	2	Parent=FBgn0039495.3.mrna1;Target=FBgn0039495.3 104 258 +
Chr2	stalkie_big_nohaplotig	CDS	153054878	153055140	.	+	0	Parent=FBgn0039495.3.mrna1;Target=FBgn0039495.3 259 521 +
Chr2	stalkie_big_nohaplotig	CDS	153055198	153055391	.	+	1	Parent=FBgn0039495.3.mrna1;Target=FBgn0039495.3 522 715 +
Chr2	stalkie_big_nohaplotig	CDS	153055452	153055547	.	+	2	Parent=FBgn0039495.3.mrna1;Target=FBgn0039495.3 716 811 +
Chr2	stalkie_big_nohaplotig	CDS	153055604	153055908	.	+	2	Parent=FBgn0039495.3.mrna1;Target=FBgn0039495.3 812 1116 +
Chr2	gffcl	locus	153058412	153059942	.	+	.	ID=RLOC_00022853;geneIDs=FBgn0039495.1.path1;transcripts=FBgn0039495.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153058412	153059942	.	+	.	ID=FBgn0039495.1.mrna1;geneID=FBgn0039495.1.path1;Name=FBgn0039495.1;Dir=sensecoverage=99.9;identity=99.4;matches=1117;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022853
Chr2	stalkie_big_nohaplotig	exon	153058412	153058501	100	+	.	Parent=FBgn0039495.1.mrna1;Target=FBgn0039495.1 2 91 +
Chr2	stalkie_big_nohaplotig	exon	153058557	153058714	100	+	.	Parent=FBgn0039495.1.mrna1;Target=FBgn0039495.1 92 249 +
Chr2	stalkie_big_nohaplotig	exon	153058869	153059143	99	+	.	Parent=FBgn0039495.1.mrna1;Target=FBgn0039495.1 250 524 +
Chr2	stalkie_big_nohaplotig	exon	153059198	153059391	100	+	.	Parent=FBgn0039495.1.mrna1;Target=FBgn0039495.1 525 718 +
Chr2	stalkie_big_nohaplotig	exon	153059470	153059568	96	+	.	Parent=FBgn0039495.1.mrna1;Target=FBgn0039495.1 719 817 +
Chr2	stalkie_big_nohaplotig	exon	153059635	153059942	99	+	.	Parent=FBgn0039495.1.mrna1;Target=FBgn0039495.1 818 1125 +
Chr2	stalkie_big_nohaplotig	CDS	153058414	153058501	.	+	0	Parent=FBgn0039495.1.mrna1;Target=FBgn0039495.1 4 91 +
Chr2	stalkie_big_nohaplotig	CDS	153058557	153058714	.	+	2	Parent=FBgn0039495.1.mrna1;Target=FBgn0039495.1 92 249 +
Chr2	stalkie_big_nohaplotig	CDS	153058869	153059143	.	+	0	Parent=FBgn0039495.1.mrna1;Target=FBgn0039495.1 250 524 +
Chr2	stalkie_big_nohaplotig	CDS	153059198	153059391	.	+	1	Parent=FBgn0039495.1.mrna1;Target=FBgn0039495.1 525 718 +
Chr2	stalkie_big_nohaplotig	CDS	153059470	153059568	.	+	2	Parent=FBgn0039495.1.mrna1;Target=FBgn0039495.1 719 817 +
Chr2	stalkie_big_nohaplotig	CDS	153059635	153059942	.	+	2	Parent=FBgn0039495.1.mrna1;Target=FBgn0039495.1 818 1125 +
Chr2	gffcl	locus	153069341	153069724	.	+	.	ID=RLOC_00022854;geneIDs=comp134897_c0_seq1.path1;transcripts=comp134897_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153069341	153069724	.	+	.	ID=comp134897_c0_seq1.mrna1;geneID=comp134897_c0_seq1.path1;Name=comp134897_c0_seq1;Dir=antisensecoverage=100.0;identity=98.7;matches=299;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022854
Chr2	stalkie_big_nohaplotig	exon	153069341	153069590	98	+	.	Parent=comp134897_c0_seq1.mrna1;Target=comp134897_c0_seq1 54 303 -
Chr2	stalkie_big_nohaplotig	exon	153069672	153069724	100	+	.	Parent=comp134897_c0_seq1.mrna1;Target=comp134897_c0_seq1 1 53 -
Chr2	stalkie_big_nohaplotig	CDS	153069506	153069590	.	+	0	Parent=comp134897_c0_seq1.mrna1;Target=comp134897_c0_seq1 54 138 .
Chr2	stalkie_big_nohaplotig	CDS	153069672	153069724	.	+	2	Parent=comp134897_c0_seq1.mrna1;Target=comp134897_c0_seq1 1 53 .
Chr2	gffcl	locus	153070636	153071021	.	+	.	ID=RLOC_00022855;geneIDs=Dv_FBgn0211145.path2;transcripts=Dv_FBgn0211145.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	153070636	153071021	.	+	.	ID=Dv_FBgn0211145.mrna2;geneID=Dv_FBgn0211145.path2;Name=Dv_FBgn0211145;Dir=sensecoverage=100.0;identity=99.4;matches=328;mismatches=2;indels=0;unknowns=0;locus=RLOC_00022855
Chr2	stalkie_big_nohaplotig	exon	153070636	153070660	100	+	.	Parent=Dv_FBgn0211145.mrna2;Target=Dv_FBgn0211145 1 25 +
Chr2	stalkie_big_nohaplotig	exon	153070717	153071021	99	+	.	Parent=Dv_FBgn0211145.mrna2;Target=Dv_FBgn0211145 26 330 +
Chr2	stalkie_big_nohaplotig	CDS	153070636	153070660	.	+	0	Parent=Dv_FBgn0211145.mrna2;Target=Dv_FBgn0211145 1 25 +
Chr2	stalkie_big_nohaplotig	CDS	153070717	153071021	.	+	2	Parent=Dv_FBgn0211145.mrna2;Target=Dv_FBgn0211145 26 330 +
Chr2	gffcl	locus	153092969	153093352	.	+	.	ID=RLOC_00022856;geneIDs=comp134897_c0_seq1.path2;transcripts=comp134897_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	153092969	153093352	.	+	.	ID=comp134897_c0_seq1.mrna2;geneID=comp134897_c0_seq1.path2;Name=comp134897_c0_seq1;Dir=antisensecoverage=100.0;identity=98.7;matches=299;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022856
Chr2	stalkie_big_nohaplotig	exon	153092969	153093218	98	+	.	Parent=comp134897_c0_seq1.mrna2;Target=comp134897_c0_seq1 54 303 -
Chr2	stalkie_big_nohaplotig	exon	153093300	153093352	100	+	.	Parent=comp134897_c0_seq1.mrna2;Target=comp134897_c0_seq1 1 53 -
Chr2	stalkie_big_nohaplotig	CDS	153093134	153093218	.	+	0	Parent=comp134897_c0_seq1.mrna2;Target=comp134897_c0_seq1 54 138 .
Chr2	stalkie_big_nohaplotig	CDS	153093300	153093352	.	+	2	Parent=comp134897_c0_seq1.mrna2;Target=comp134897_c0_seq1 1 53 .
Chr2	gffcl	locus	153094264	153094649	.	+	.	ID=RLOC_00022857;geneIDs=Dv_FBgn0211145.path1;transcripts=Dv_FBgn0211145.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153094264	153094649	.	+	.	ID=Dv_FBgn0211145.mrna1;geneID=Dv_FBgn0211145.path1;Name=Dv_FBgn0211145;Dir=sensecoverage=100.0;identity=99.7;matches=329;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022857
Chr2	stalkie_big_nohaplotig	exon	153094264	153094288	100	+	.	Parent=Dv_FBgn0211145.mrna1;Target=Dv_FBgn0211145 1 25 +
Chr2	stalkie_big_nohaplotig	exon	153094345	153094649	99	+	.	Parent=Dv_FBgn0211145.mrna1;Target=Dv_FBgn0211145 26 330 +
Chr2	stalkie_big_nohaplotig	CDS	153094264	153094288	.	+	0	Parent=Dv_FBgn0211145.mrna1;Target=Dv_FBgn0211145 1 25 +
Chr2	stalkie_big_nohaplotig	CDS	153094345	153094649	.	+	2	Parent=Dv_FBgn0211145.mrna1;Target=Dv_FBgn0211145 26 330 +
Chr2	gffcl	locus	153104697	153108429	.	+	.	ID=RLOC_00022858;geneIDs=FBgn0039495.2.path1;transcripts=FBgn0039495.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153104697	153108429	.	+	.	ID=FBgn0039495.2.mrna1;geneID=FBgn0039495.2.path1;Name=FBgn0039495.2;Dir=sensecoverage=100.0;identity=99.0;matches=1132;mismatches=11;indels=0;unknowns=0;locus=RLOC_00022858
Chr2	stalkie_big_nohaplotig	exon	153104697	153104784	98	+	.	Parent=FBgn0039495.2.mrna1;Target=FBgn0039495.2 1 88 +
Chr2	stalkie_big_nohaplotig	exon	153104855	153105006	99	+	.	Parent=FBgn0039495.2.mrna1;Target=FBgn0039495.2 89 240 +
Chr2	stalkie_big_nohaplotig	exon	153107331	153107632	98	+	.	Parent=FBgn0039495.2.mrna1;Target=FBgn0039495.2 241 542 +
Chr2	stalkie_big_nohaplotig	exon	153107705	153107898	98	+	.	Parent=FBgn0039495.2.mrna1;Target=FBgn0039495.2 543 736 +
Chr2	stalkie_big_nohaplotig	exon	153107964	153108062	100	+	.	Parent=FBgn0039495.2.mrna1;Target=FBgn0039495.2 737 835 +
Chr2	stalkie_big_nohaplotig	exon	153108122	153108429	99	+	.	Parent=FBgn0039495.2.mrna1;Target=FBgn0039495.2 836 1143 +
Chr2	stalkie_big_nohaplotig	CDS	153104697	153104784	.	+	0	Parent=FBgn0039495.2.mrna1;Target=FBgn0039495.2 1 88 +
Chr2	stalkie_big_nohaplotig	CDS	153104855	153105006	.	+	2	Parent=FBgn0039495.2.mrna1;Target=FBgn0039495.2 89 240 +
Chr2	stalkie_big_nohaplotig	CDS	153107331	153107632	.	+	0	Parent=FBgn0039495.2.mrna1;Target=FBgn0039495.2 241 542 +
Chr2	stalkie_big_nohaplotig	CDS	153107705	153107898	.	+	1	Parent=FBgn0039495.2.mrna1;Target=FBgn0039495.2 543 736 +
Chr2	stalkie_big_nohaplotig	CDS	153107964	153108062	.	+	2	Parent=FBgn0039495.2.mrna1;Target=FBgn0039495.2 737 835 +
Chr2	stalkie_big_nohaplotig	CDS	153108122	153108429	.	+	2	Parent=FBgn0039495.2.mrna1;Target=FBgn0039495.2 836 1143 +
Chr2	gffcl	locus	153116913	153118054	.	+	.	ID=RLOC_00022859;geneIDs=FBgn0051065.1.path1;transcripts=FBgn0051065.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153116913	153118054	.	+	.	ID=FBgn0051065.1.mrna1;geneID=FBgn0051065.1.path1;Name=FBgn0051065.1;Dir=sensecoverage=100.0;identity=99.6;matches=911;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022859
Chr2	stalkie_big_nohaplotig	exon	153116913	153117043	98	+	.	Parent=FBgn0051065.1.mrna1;Target=FBgn0051065.1 1 131 +
Chr2	stalkie_big_nohaplotig	exon	153117101	153117290	98	+	.	Parent=FBgn0051065.1.mrna1;Target=FBgn0051065.1 132 321 +
Chr2	stalkie_big_nohaplotig	exon	153117350	153117548	100	+	.	Parent=FBgn0051065.1.mrna1;Target=FBgn0051065.1 322 520 +
Chr2	stalkie_big_nohaplotig	exon	153117598	153117745	100	+	.	Parent=FBgn0051065.1.mrna1;Target=FBgn0051065.1 521 668 +
Chr2	stalkie_big_nohaplotig	exon	153117808	153118054	100	+	.	Parent=FBgn0051065.1.mrna1;Target=FBgn0051065.1 669 915 +
Chr2	stalkie_big_nohaplotig	CDS	153116913	153117043	.	+	0	Parent=FBgn0051065.1.mrna1;Target=FBgn0051065.1 1 131 +
Chr2	stalkie_big_nohaplotig	CDS	153117101	153117290	.	+	1	Parent=FBgn0051065.1.mrna1;Target=FBgn0051065.1 132 321 +
Chr2	stalkie_big_nohaplotig	CDS	153117350	153117548	.	+	0	Parent=FBgn0051065.1.mrna1;Target=FBgn0051065.1 322 520 +
Chr2	stalkie_big_nohaplotig	CDS	153117598	153117745	.	+	2	Parent=FBgn0051065.1.mrna1;Target=FBgn0051065.1 521 668 +
Chr2	stalkie_big_nohaplotig	CDS	153117808	153118054	.	+	1	Parent=FBgn0051065.1.mrna1;Target=FBgn0051065.1 669 915 +
Chr2	gffcl	locus	153120327	153401509	.	-	.	ID=RLOC_00022860;geneIDs=FBgn0004197.path1,comp163742_c2_seq1.path1,comp163742_c2_seq1.path2;transcripts=comp163742_c2_seq1.mrna1,FBgn0004197.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153120327	153401509	.	-	.	ID=comp163742_c2_seq1.mrna1;geneID=comp163742_c2_seq1.path1;Name=comp163742_c2_seq1;Dir=antisensecoverage=63.3;identity=99.5;matches=2846;mismatches=13;indels=2;unknowns=0;locus=RLOC_00022860
Chr2	stalkie_big_nohaplotig	exon	153120327	153120962	100	-	.	Parent=comp163742_c2_seq1.mrna1;Target=comp163742_c2_seq1 1 636 -
Chr2	stalkie_big_nohaplotig	exon	153120967	153122631	99	-	.	Parent=comp163742_c2_seq1.mrna1;Target=comp163742_c2_seq1 680 2344 -
Chr2	stalkie_big_nohaplotig	exon	153122708	153123258	99	-	.	Parent=comp163742_c2_seq1.mrna1;Target=comp163742_c2_seq1 2345 2895 -
Chr2	stalkie_big_nohaplotig	exon	153397552	153397553	100	-	.	Parent=comp163742_c2_seq1.mrna1;Target=comp163742_c2_seq1 3173 3174 -
Chr2	stalkie_big_nohaplotig	exon	153401505	153401509	100	-	.	Parent=comp163742_c2_seq1.mrna1;Target=comp163742_c2_seq1 3175 3179 -
Chr2	stalkie_big_nohaplotig	CDS	153121855	153122631	.	-	2	Parent=comp163742_c2_seq1.mrna1;Target=comp163742_c2_seq1 1568 2344 .
Chr2	stalkie_big_nohaplotig	CDS	153122708	153123258	.	-	1	Parent=comp163742_c2_seq1.mrna1;Target=comp163742_c2_seq1 2345 2895 .
Chr2	stalkie_big_nohaplotig	CDS	153397552	153397553	.	-	0	Parent=comp163742_c2_seq1.mrna1;Target=comp163742_c2_seq1 3173 3174 .
Chr2	stalkie_big_nohaplotig	CDS	153401505	153401509	.	-	2	Parent=comp163742_c2_seq1.mrna1;Target=comp163742_c2_seq1 3175 3179 .
Chr2	stalkie_big_nohaplotig	mRNA	153121858	153169183	.	-	.	ID=FBgn0004197.mrna1;geneID=FBgn0004197.path1;Name=FBgn0004197;Dir=sensecoverage=80.4;identity=96.8;matches=1436;mismatches=33;indels=15;unknowns=0;locus=RLOC_00022860
Chr2	stalkie_big_nohaplotig	exon	153121858	153122631	99	-	.	Parent=FBgn0004197.mrna1;Target=FBgn0004197 1408 2181 +
Chr2	stalkie_big_nohaplotig	exon	153122708	153123258	99	-	.	Parent=FBgn0004197.mrna1;Target=FBgn0004197 857 1407 +
Chr2	stalkie_big_nohaplotig	exon	153128626	153128635	100	-	.	Parent=FBgn0004197.mrna1;Target=FBgn0004197 846 855 +
Chr2	stalkie_big_nohaplotig	exon	153131972	153131979	100	-	.	Parent=FBgn0004197.mrna1;Target=FBgn0004197 832 839 +
Chr2	stalkie_big_nohaplotig	exon	153135893	153135897	100	-	.	Parent=FBgn0004197.mrna1;Target=FBgn0004197 567 571 +
Chr2	stalkie_big_nohaplotig	exon	153142953	153142969	82	-	.	Parent=FBgn0004197.mrna1;Target=FBgn0004197 550 566 +
Chr2	stalkie_big_nohaplotig	exon	153143600	153143647	52	-	.	Parent=FBgn0004197.mrna1;Target=FBgn0004197 505 544 +
Chr2	stalkie_big_nohaplotig	exon	153156038	153156043	100	-	.	Parent=FBgn0004197.mrna1;Target=FBgn0004197 499 504 +
Chr2	stalkie_big_nohaplotig	exon	153158495	153158542	67	-	.	Parent=FBgn0004197.mrna1;Target=FBgn0004197 448 498 +
Chr2	stalkie_big_nohaplotig	exon	153163113	153163119	100	-	.	Parent=FBgn0004197.mrna1;Target=FBgn0004197 441 447 +
Chr2	stalkie_big_nohaplotig	exon	153169179	153169183	100	-	.	Parent=FBgn0004197.mrna1;Target=FBgn0004197 429 433 +
Chr2	stalkie_big_nohaplotig	CDS	153121858	153122631	.	-	0	Parent=FBgn0004197.mrna1;Target=FBgn0004197 1408 2181 +
Chr2	stalkie_big_nohaplotig	CDS	153122708	153122800	.	-	0	Parent=FBgn0004197.mrna1;Target=FBgn0004197 1315 1407 +
Chr2	gffcl	locus	153189875	153210033	.	-	.	ID=RLOC_00022861;geneIDs=comp59213_c0_seq1.path2;transcripts=comp59213_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	153189875	153210033	.	-	.	ID=comp59213_c0_seq1.mrna2;geneID=comp59213_c0_seq1.path2;Name=comp59213_c0_seq1;Dir=indeterminatecoverage=61.3;identity=97.8;matches=585;mismatches=4;indels=9;unknowns=0;Target=comp59213_c0_seq1 538 425 .;locus=RLOC_00022861
Chr2	stalkie_big_nohaplotig	exon	153189875	153190444	97	-	.	Parent=comp59213_c0_seq1.mrna2;Target=comp59213_c0_seq1 975 397 .
Chr2	stalkie_big_nohaplotig	exon	153202049	153202052	100	-	.	Parent=comp59213_c0_seq1.mrna2;Target=comp59213_c0_seq1 396 393 .
Chr2	stalkie_big_nohaplotig	exon	153203850	153203858	100	-	.	Parent=comp59213_c0_seq1.mrna2;Target=comp59213_c0_seq1 392 384 .
Chr2	stalkie_big_nohaplotig	exon	153204983	153204984	100	-	.	Parent=comp59213_c0_seq1.mrna2;Target=comp59213_c0_seq1 383 382 .
Chr2	stalkie_big_nohaplotig	exon	153210030	153210033	100	-	.	Parent=comp59213_c0_seq1.mrna2;Target=comp59213_c0_seq1 381 378 .
Chr2	stalkie_big_nohaplotig	CDS	153190303	153190416	.	-	0	Parent=comp59213_c0_seq1.mrna2
Chr2	gffcl	locus	153213440	153216628	.	+	.	ID=RLOC_00022862;geneIDs=comp150502_c0_seq1.path1;transcripts=comp150502_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153213440	153216628	.	+	.	ID=comp150502_c0_seq1.mrna1;geneID=comp150502_c0_seq1.path1;Name=comp150502_c0_seq1;Dir=antisensecoverage=100.0;identity=99.5;matches=1104;mismatches=5;indels=0;unknowns=0;Target=comp150502_c0_seq1 825 923 .;locus=RLOC_00022862
Chr2	stalkie_big_nohaplotig	exon	153213440	153214020	99	+	.	Parent=comp150502_c0_seq1.mrna1;Target=comp150502_c0_seq1 529 1109 -
Chr2	stalkie_big_nohaplotig	exon	153214201	153214500	99	+	.	Parent=comp150502_c0_seq1.mrna1;Target=comp150502_c0_seq1 229 528 -
Chr2	stalkie_big_nohaplotig	exon	153216401	153216628	99	+	.	Parent=comp150502_c0_seq1.mrna1;Target=comp150502_c0_seq1 1 228 -
Chr2	stalkie_big_nohaplotig	CDS	153213626	153213724	.	+	0	Parent=comp150502_c0_seq1.mrna1
Chr2	gffcl	locus	153284014	153284945	.	-	.	ID=RLOC_00022863;geneIDs=FBgn0261995.1.path1;transcripts=FBgn0261995.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153284014	153284945	.	-	.	ID=FBgn0261995.1.mrna1;geneID=FBgn0261995.1.path1;Name=FBgn0261995.1;Dir=sensecoverage=100.0;identity=100.0;matches=714;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022863
Chr2	stalkie_big_nohaplotig	exon	153284014	153284209	100	-	.	Parent=FBgn0261995.1.mrna1;Target=FBgn0261995.1 519 714 +
Chr2	stalkie_big_nohaplotig	exon	153284275	153284310	100	-	.	Parent=FBgn0261995.1.mrna1;Target=FBgn0261995.1 483 518 +
Chr2	stalkie_big_nohaplotig	exon	153284367	153284577	100	-	.	Parent=FBgn0261995.1.mrna1;Target=FBgn0261995.1 272 482 +
Chr2	stalkie_big_nohaplotig	exon	153284675	153284945	100	-	.	Parent=FBgn0261995.1.mrna1;Target=FBgn0261995.1 1 271 +
Chr2	stalkie_big_nohaplotig	CDS	153284014	153284209	.	-	1	Parent=FBgn0261995.1.mrna1;Target=FBgn0261995.1 519 714 +
Chr2	stalkie_big_nohaplotig	CDS	153284275	153284310	.	-	1	Parent=FBgn0261995.1.mrna1;Target=FBgn0261995.1 483 518 +
Chr2	stalkie_big_nohaplotig	CDS	153284367	153284577	.	-	2	Parent=FBgn0261995.1.mrna1;Target=FBgn0261995.1 272 482 +
Chr2	stalkie_big_nohaplotig	CDS	153284675	153284945	.	-	0	Parent=FBgn0261995.1.mrna1;Target=FBgn0261995.1 1 271 +
Chr2	gffcl	locus	153286210	153289215	.	+	.	ID=RLOC_00022864;geneIDs=FBgn0039635.1.path1;transcripts=FBgn0039635.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153286210	153289215	.	+	.	ID=FBgn0039635.1.mrna1;geneID=FBgn0039635.1.path1;Name=FBgn0039635.1;Dir=sensecoverage=100.0;identity=99.9;matches=1097;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022864
Chr2	stalkie_big_nohaplotig	exon	153286210	153286422	100	+	.	Parent=FBgn0039635.1.mrna1;Target=FBgn0039635.1 1 213 +
Chr2	stalkie_big_nohaplotig	exon	153286686	153286847	100	+	.	Parent=FBgn0039635.1.mrna1;Target=FBgn0039635.1 214 375 +
Chr2	stalkie_big_nohaplotig	exon	153288093	153288504	99	+	.	Parent=FBgn0039635.1.mrna1;Target=FBgn0039635.1 376 787 +
Chr2	stalkie_big_nohaplotig	exon	153288839	153288958	100	+	.	Parent=FBgn0039635.1.mrna1;Target=FBgn0039635.1 788 907 +
Chr2	stalkie_big_nohaplotig	exon	153289025	153289215	100	+	.	Parent=FBgn0039635.1.mrna1;Target=FBgn0039635.1 908 1098 +
Chr2	stalkie_big_nohaplotig	CDS	153286210	153286422	.	+	0	Parent=FBgn0039635.1.mrna1;Target=FBgn0039635.1 1 213 +
Chr2	stalkie_big_nohaplotig	CDS	153286686	153286847	.	+	0	Parent=FBgn0039635.1.mrna1;Target=FBgn0039635.1 214 375 +
Chr2	stalkie_big_nohaplotig	CDS	153288093	153288504	.	+	0	Parent=FBgn0039635.1.mrna1;Target=FBgn0039635.1 376 787 +
Chr2	stalkie_big_nohaplotig	CDS	153288839	153288958	.	+	2	Parent=FBgn0039635.1.mrna1;Target=FBgn0039635.1 788 907 +
Chr2	stalkie_big_nohaplotig	CDS	153289025	153289215	.	+	2	Parent=FBgn0039635.1.mrna1;Target=FBgn0039635.1 908 1098 +
Chr2	gffcl	locus	153296768	153298436	.	+	.	ID=RLOC_00022865;geneIDs=FBgn0039636.1.path1;transcripts=FBgn0039636.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153296768	153298436	.	+	.	ID=FBgn0039636.1.mrna1;geneID=FBgn0039636.1.path1;Name=FBgn0039636.1;Dir=sensecoverage=100.0;identity=99.5;matches=1466;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022865
Chr2	stalkie_big_nohaplotig	exon	153296768	153297024	100	+	.	Parent=FBgn0039636.1.mrna1;Target=FBgn0039636.1 1 257 +
Chr2	stalkie_big_nohaplotig	exon	153297099	153297893	99	+	.	Parent=FBgn0039636.1.mrna1;Target=FBgn0039636.1 258 1052 +
Chr2	stalkie_big_nohaplotig	exon	153297959	153298221	99	+	.	Parent=FBgn0039636.1.mrna1;Target=FBgn0039636.1 1053 1315 +
Chr2	stalkie_big_nohaplotig	exon	153298279	153298436	100	+	.	Parent=FBgn0039636.1.mrna1;Target=FBgn0039636.1 1316 1473 +
Chr2	stalkie_big_nohaplotig	CDS	153296768	153297024	.	+	0	Parent=FBgn0039636.1.mrna1;Target=FBgn0039636.1 1 257 +
Chr2	stalkie_big_nohaplotig	CDS	153297099	153297893	.	+	1	Parent=FBgn0039636.1.mrna1;Target=FBgn0039636.1 258 1052 +
Chr2	stalkie_big_nohaplotig	CDS	153297959	153298221	.	+	1	Parent=FBgn0039636.1.mrna1;Target=FBgn0039636.1 1053 1315 +
Chr2	stalkie_big_nohaplotig	CDS	153298279	153298436	.	+	2	Parent=FBgn0039636.1.mrna1;Target=FBgn0039636.1 1316 1473 +
Chr2	gffcl	locus	153300307	153303492	.	-	.	ID=RLOC_00022866;geneIDs=FBgn0005596.1.path1;transcripts=FBgn0005596.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153300307	153303492	.	-	.	ID=FBgn0005596.1.mrna1;geneID=FBgn0005596.1.path1;Name=FBgn0005596.1;Dir=sensecoverage=100.0;identity=99.4;matches=2774;mismatches=16;indels=0;unknowns=0;locus=RLOC_00022866
Chr2	stalkie_big_nohaplotig	exon	153300307	153300369	96	-	.	Parent=FBgn0005596.1.mrna1;Target=FBgn0005596.1 2728 2790 +
Chr2	stalkie_big_nohaplotig	exon	153300433	153301534	99	-	.	Parent=FBgn0005596.1.mrna1;Target=FBgn0005596.1 1626 2727 +
Chr2	stalkie_big_nohaplotig	exon	153301587	153301658	100	-	.	Parent=FBgn0005596.1.mrna1;Target=FBgn0005596.1 1554 1625 +
Chr2	stalkie_big_nohaplotig	exon	153301748	153301987	100	-	.	Parent=FBgn0005596.1.mrna1;Target=FBgn0005596.1 1314 1553 +
Chr2	stalkie_big_nohaplotig	exon	153302054	153302198	100	-	.	Parent=FBgn0005596.1.mrna1;Target=FBgn0005596.1 1169 1313 +
Chr2	stalkie_big_nohaplotig	exon	153302258	153303125	99	-	.	Parent=FBgn0005596.1.mrna1;Target=FBgn0005596.1 301 1168 +
Chr2	stalkie_big_nohaplotig	exon	153303193	153303492	99	-	.	Parent=FBgn0005596.1.mrna1;Target=FBgn0005596.1 1 300 +
Chr2	stalkie_big_nohaplotig	CDS	153300307	153300369	.	-	0	Parent=FBgn0005596.1.mrna1;Target=FBgn0005596.1 2728 2790 +
Chr2	stalkie_big_nohaplotig	CDS	153300433	153301534	.	-	1	Parent=FBgn0005596.1.mrna1;Target=FBgn0005596.1 1626 2727 +
Chr2	stalkie_big_nohaplotig	CDS	153301587	153301658	.	-	1	Parent=FBgn0005596.1.mrna1;Target=FBgn0005596.1 1554 1625 +
Chr2	stalkie_big_nohaplotig	CDS	153301748	153301987	.	-	1	Parent=FBgn0005596.1.mrna1;Target=FBgn0005596.1 1314 1553 +
Chr2	stalkie_big_nohaplotig	CDS	153302054	153302198	.	-	2	Parent=FBgn0005596.1.mrna1;Target=FBgn0005596.1 1169 1313 +
Chr2	stalkie_big_nohaplotig	CDS	153302258	153303125	.	-	0	Parent=FBgn0005596.1.mrna1;Target=FBgn0005596.1 301 1168 +
Chr2	stalkie_big_nohaplotig	CDS	153303193	153303492	.	-	0	Parent=FBgn0005596.1.mrna1;Target=FBgn0005596.1 1 300 +
Chr2	gffcl	locus	153306538	153324203	.	+	.	ID=RLOC_00022867;geneIDs=FBgn0039214.1.path1,comp160541_c0_seq1.path1;transcripts=comp160541_c0_seq1.mrna1,FBgn0039214.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153306538	153324203	.	+	.	ID=comp160541_c0_seq1.mrna1;geneID=comp160541_c0_seq1.path1;Name=comp160541_c0_seq1;Dir=antisensecoverage=100.0;identity=99.7;matches=12351;mismatches=30;indels=6;unknowns=0;locus=RLOC_00022867
Chr2	stalkie_big_nohaplotig	exon	153306538	153306866	100	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 12060 12388 -
Chr2	stalkie_big_nohaplotig	exon	153307005	153308000	99	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 11064 12059 -
Chr2	stalkie_big_nohaplotig	exon	153308072	153308734	99	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 10401 11063 -
Chr2	stalkie_big_nohaplotig	exon	153308787	153308847	100	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 10340 10400 -
Chr2	stalkie_big_nohaplotig	exon	153308916	153309792	100	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 9463 10339 -
Chr2	stalkie_big_nohaplotig	exon	153309853	153310259	100	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 9056 9462 -
Chr2	stalkie_big_nohaplotig	exon	153310323	153310784	99	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 8594 9055 -
Chr2	stalkie_big_nohaplotig	exon	153310854	153311123	98	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 8324 8593 -
Chr2	stalkie_big_nohaplotig	exon	153311183	153311342	100	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 8164 8323 -
Chr2	stalkie_big_nohaplotig	exon	153311553	153314334	99	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 5382 8163 -
Chr2	stalkie_big_nohaplotig	exon	153314421	153314523	100	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 5279 5381 -
Chr2	stalkie_big_nohaplotig	exon	153314657	153314840	99	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 5095 5278 -
Chr2	stalkie_big_nohaplotig	exon	153314907	153315469	99	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 4532 5094 -
Chr2	stalkie_big_nohaplotig	exon	153315579	153315702	100	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 4408 4531 -
Chr2	stalkie_big_nohaplotig	exon	153315765	153315952	100	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 4220 4407 -
Chr2	stalkie_big_nohaplotig	exon	153316024	153316294	99	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 3949 4219 -
Chr2	stalkie_big_nohaplotig	exon	153317104	153317286	100	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 3766 3948 -
Chr2	stalkie_big_nohaplotig	exon	153317352	153317751	99	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 3366 3765 -
Chr2	stalkie_big_nohaplotig	exon	153317825	153317930	100	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 3260 3365 -
Chr2	stalkie_big_nohaplotig	exon	153317995	153318166	100	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 3088 3259 -
Chr2	stalkie_big_nohaplotig	exon	153318227	153318417	100	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 2897 3087 -
Chr2	stalkie_big_nohaplotig	exon	153318477	153318829	99	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 2544 2896 -
Chr2	stalkie_big_nohaplotig	exon	153320122	153321097	100	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 1568 2543 -
Chr2	stalkie_big_nohaplotig	exon	153321163	153321286	100	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 1444 1567 -
Chr2	stalkie_big_nohaplotig	exon	153321376	153321589	100	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 1230 1443 -
Chr2	stalkie_big_nohaplotig	exon	153322982	153324203	98	+	.	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 2 1229 -
Chr2	stalkie_big_nohaplotig	CDS	153306824	153306866	.	+	0	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 12060 12102 .
Chr2	stalkie_big_nohaplotig	CDS	153307005	153308000	.	+	2	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 11064 12059 .
Chr2	stalkie_big_nohaplotig	CDS	153308072	153308734	.	+	2	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 10401 11063 .
Chr2	stalkie_big_nohaplotig	CDS	153308787	153308847	.	+	2	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 10340 10400 .
Chr2	stalkie_big_nohaplotig	CDS	153308916	153309792	.	+	1	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 9463 10339 .
Chr2	stalkie_big_nohaplotig	CDS	153309853	153310259	.	+	0	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 9056 9462 .
Chr2	stalkie_big_nohaplotig	CDS	153310323	153310784	.	+	1	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 8594 9055 .
Chr2	stalkie_big_nohaplotig	CDS	153310854	153311123	.	+	1	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 8324 8593 .
Chr2	stalkie_big_nohaplotig	CDS	153311183	153311342	.	+	1	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 8164 8323 .
Chr2	stalkie_big_nohaplotig	CDS	153311553	153314334	.	+	0	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 5382 8163 .
Chr2	stalkie_big_nohaplotig	CDS	153314421	153314523	.	+	2	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 5279 5381 .
Chr2	stalkie_big_nohaplotig	CDS	153314657	153314840	.	+	1	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 5095 5278 .
Chr2	stalkie_big_nohaplotig	CDS	153314907	153315469	.	+	0	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 4532 5094 .
Chr2	stalkie_big_nohaplotig	CDS	153315579	153315702	.	+	1	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 4408 4531 .
Chr2	stalkie_big_nohaplotig	CDS	153315765	153315952	.	+	0	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 4220 4407 .
Chr2	stalkie_big_nohaplotig	CDS	153316024	153316294	.	+	1	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 3949 4219 .
Chr2	stalkie_big_nohaplotig	CDS	153317104	153317286	.	+	0	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 3766 3948 .
Chr2	stalkie_big_nohaplotig	CDS	153317352	153317751	.	+	0	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 3366 3765 .
Chr2	stalkie_big_nohaplotig	CDS	153317825	153317930	.	+	2	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 3260 3365 .
Chr2	stalkie_big_nohaplotig	CDS	153317995	153318166	.	+	1	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 3088 3259 .
Chr2	stalkie_big_nohaplotig	CDS	153318227	153318417	.	+	0	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 2897 3087 .
Chr2	stalkie_big_nohaplotig	CDS	153318477	153318829	.	+	1	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 2544 2896 .
Chr2	stalkie_big_nohaplotig	CDS	153320122	153321097	.	+	2	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 1568 2543 .
Chr2	stalkie_big_nohaplotig	CDS	153321163	153321286	.	+	1	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 1444 1567 .
Chr2	stalkie_big_nohaplotig	CDS	153321376	153321589	.	+	0	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 1230 1443 .
Chr2	stalkie_big_nohaplotig	CDS	153322982	153323784	.	+	2	Parent=comp160541_c0_seq1.mrna1;Target=comp160541_c0_seq1 427 1229 .
Chr2	stalkie_big_nohaplotig	mRNA	153306815	153323781	.	+	.	ID=FBgn0039214.1.mrna1;geneID=FBgn0039214.1.path1;Name=FBgn0039214.1;Dir=sensecoverage=100.0;identity=99.7;matches=11625;mismatches=30;indels=0;unknowns=0;locus=RLOC_00022867
Chr2	stalkie_big_nohaplotig	exon	153306815	153306866	100	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 1 52 +
Chr2	stalkie_big_nohaplotig	exon	153307005	153308000	99	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 53 1048 +
Chr2	stalkie_big_nohaplotig	exon	153308072	153308734	99	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 1049 1711 +
Chr2	stalkie_big_nohaplotig	exon	153308787	153308847	100	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 1712 1772 +
Chr2	stalkie_big_nohaplotig	exon	153308916	153309792	100	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 1773 2649 +
Chr2	stalkie_big_nohaplotig	exon	153309853	153310259	100	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 2650 3056 +
Chr2	stalkie_big_nohaplotig	exon	153310323	153310784	99	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 3057 3518 +
Chr2	stalkie_big_nohaplotig	exon	153310854	153311123	98	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 3519 3788 +
Chr2	stalkie_big_nohaplotig	exon	153311183	153311342	100	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 3789 3948 +
Chr2	stalkie_big_nohaplotig	exon	153311553	153314334	99	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 3949 6730 +
Chr2	stalkie_big_nohaplotig	exon	153314421	153314523	100	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 6731 6833 +
Chr2	stalkie_big_nohaplotig	exon	153314657	153314840	99	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 6834 7017 +
Chr2	stalkie_big_nohaplotig	exon	153314907	153315469	99	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 7018 7580 +
Chr2	stalkie_big_nohaplotig	exon	153315579	153315702	100	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 7581 7704 +
Chr2	stalkie_big_nohaplotig	exon	153315765	153315952	100	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 7705 7892 +
Chr2	stalkie_big_nohaplotig	exon	153316051	153316294	99	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 7893 8136 +
Chr2	stalkie_big_nohaplotig	exon	153317104	153317286	100	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 8137 8319 +
Chr2	stalkie_big_nohaplotig	exon	153317352	153317751	99	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 8320 8719 +
Chr2	stalkie_big_nohaplotig	exon	153317825	153317930	100	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 8720 8825 +
Chr2	stalkie_big_nohaplotig	exon	153317995	153318166	100	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 8826 8997 +
Chr2	stalkie_big_nohaplotig	exon	153318227	153318417	100	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 8998 9188 +
Chr2	stalkie_big_nohaplotig	exon	153318477	153318829	99	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 9189 9541 +
Chr2	stalkie_big_nohaplotig	exon	153320122	153321097	100	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 9542 10517 +
Chr2	stalkie_big_nohaplotig	exon	153321163	153321286	100	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 10518 10641 +
Chr2	stalkie_big_nohaplotig	exon	153321376	153321589	100	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 10642 10855 +
Chr2	stalkie_big_nohaplotig	exon	153322982	153323781	99	+	.	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 10856 11655 +
Chr2	stalkie_big_nohaplotig	CDS	153306815	153306866	.	+	0	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 1 52 +
Chr2	stalkie_big_nohaplotig	CDS	153307005	153308000	.	+	2	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 53 1048 +
Chr2	stalkie_big_nohaplotig	CDS	153308072	153308734	.	+	2	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 1049 1711 +
Chr2	stalkie_big_nohaplotig	CDS	153308787	153308847	.	+	2	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 1712 1772 +
Chr2	stalkie_big_nohaplotig	CDS	153308916	153309792	.	+	1	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 1773 2649 +
Chr2	stalkie_big_nohaplotig	CDS	153309853	153310259	.	+	0	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 2650 3056 +
Chr2	stalkie_big_nohaplotig	CDS	153310323	153310784	.	+	1	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 3057 3518 +
Chr2	stalkie_big_nohaplotig	CDS	153310854	153311123	.	+	1	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 3519 3788 +
Chr2	stalkie_big_nohaplotig	CDS	153311183	153311342	.	+	1	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 3789 3948 +
Chr2	stalkie_big_nohaplotig	CDS	153311553	153314334	.	+	0	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 3949 6730 +
Chr2	stalkie_big_nohaplotig	CDS	153314421	153314523	.	+	2	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 6731 6833 +
Chr2	stalkie_big_nohaplotig	CDS	153314657	153314840	.	+	1	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 6834 7017 +
Chr2	stalkie_big_nohaplotig	CDS	153314907	153315469	.	+	0	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 7018 7580 +
Chr2	stalkie_big_nohaplotig	CDS	153315579	153315702	.	+	1	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 7581 7704 +
Chr2	stalkie_big_nohaplotig	CDS	153315765	153315952	.	+	0	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 7705 7892 +
Chr2	stalkie_big_nohaplotig	CDS	153316051	153316294	.	+	1	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 7893 8136 +
Chr2	stalkie_big_nohaplotig	CDS	153317104	153317286	.	+	0	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 8137 8319 +
Chr2	stalkie_big_nohaplotig	CDS	153317352	153317751	.	+	0	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 8320 8719 +
Chr2	stalkie_big_nohaplotig	CDS	153317825	153317930	.	+	2	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 8720 8825 +
Chr2	stalkie_big_nohaplotig	CDS	153317995	153318166	.	+	1	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 8826 8997 +
Chr2	stalkie_big_nohaplotig	CDS	153318227	153318417	.	+	0	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 8998 9188 +
Chr2	stalkie_big_nohaplotig	CDS	153318477	153318829	.	+	1	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 9189 9541 +
Chr2	stalkie_big_nohaplotig	CDS	153320122	153321097	.	+	2	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 9542 10517 +
Chr2	stalkie_big_nohaplotig	CDS	153321163	153321286	.	+	1	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 10518 10641 +
Chr2	stalkie_big_nohaplotig	CDS	153321376	153321589	.	+	0	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 10642 10855 +
Chr2	stalkie_big_nohaplotig	CDS	153322982	153323781	.	+	2	Parent=FBgn0039214.1.mrna1;Target=FBgn0039214.1 10856 11655 +
Chr2	gffcl	locus	153310053	153393617	.	-	.	ID=RLOC_00022868;geneIDs=comp157019_c0_seq1.path1;transcripts=comp157019_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153310053	153393617	.	-	.	ID=comp157019_c0_seq1.mrna1;geneID=comp157019_c0_seq1.path1;Name=comp157019_c0_seq1;Dir=indeterminatecoverage=85.8;identity=85.1;matches=593;mismatches=27;indels=77;unknowns=0;Target=comp157019_c0_seq1 57 1 .;locus=RLOC_00022868
Chr2	stalkie_big_nohaplotig	exon	153310053	153310061	100	-	.	Parent=comp157019_c0_seq1.mrna1;Target=comp157019_c0_seq1 733 725 .
Chr2	stalkie_big_nohaplotig	exon	153317293	153317303	100	-	.	Parent=comp157019_c0_seq1.mrna1;Target=comp157019_c0_seq1 707 697 .
Chr2	stalkie_big_nohaplotig	exon	153318738	153318743	100	-	.	Parent=comp157019_c0_seq1.mrna1;Target=comp157019_c0_seq1 696 691 .
Chr2	stalkie_big_nohaplotig	exon	153323899	153323926	58	-	.	Parent=comp157019_c0_seq1.mrna1;Target=comp157019_c0_seq1 690 657 .
Chr2	stalkie_big_nohaplotig	exon	153337165	153337174	100	-	.	Parent=comp157019_c0_seq1.mrna1;Target=comp157019_c0_seq1 646 637 .
Chr2	stalkie_big_nohaplotig	exon	153344731	153344767	40	-	.	Parent=comp157019_c0_seq1.mrna1;Target=comp157019_c0_seq1 623 549 .
Chr2	stalkie_big_nohaplotig	exon	153352839	153352852	85	-	.	Parent=comp157019_c0_seq1.mrna1;Target=comp157019_c0_seq1 548 535 .
Chr2	stalkie_big_nohaplotig	exon	153353844	153353849	100	-	.	Parent=comp157019_c0_seq1.mrna1;Target=comp157019_c0_seq1 534 529 .
Chr2	stalkie_big_nohaplotig	exon	153355727	153355731	100	-	.	Parent=comp157019_c0_seq1.mrna1;Target=comp157019_c0_seq1 528 524 .
Chr2	stalkie_big_nohaplotig	exon	153363510	153363515	100	-	.	Parent=comp157019_c0_seq1.mrna1;Target=comp157019_c0_seq1 523 518 .
Chr2	stalkie_big_nohaplotig	exon	153365074	153365076	100	-	.	Parent=comp157019_c0_seq1.mrna1;Target=comp157019_c0_seq1 517 515 .
Chr2	stalkie_big_nohaplotig	exon	153370682	153370688	100	-	.	Parent=comp157019_c0_seq1.mrna1;Target=comp157019_c0_seq1 514 508 .
Chr2	stalkie_big_nohaplotig	exon	153385764	153385773	70	-	.	Parent=comp157019_c0_seq1.mrna1;Target=comp157019_c0_seq1 507 498 .
Chr2	stalkie_big_nohaplotig	exon	153393150	153393617	92	-	.	Parent=comp157019_c0_seq1.mrna1;Target=comp157019_c0_seq1 497 1 .
Chr2	stalkie_big_nohaplotig	CDS	153393561	153393617	.	-	0	Parent=comp157019_c0_seq1.mrna1
Chr2	gffcl	locus	153325031	153325224	.	+	.	ID=RLOC_00022869;geneIDs=comp117983_c0_seq1.path1;transcripts=comp117983_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153325031	153325224	.	+	.	ID=comp117983_c0_seq1.mrna1;geneID=comp117983_c0_seq1.path1;Name=comp117983_c0_seq1;Dir=indeterminatecoverage=67.4;identity=100.0;matches=194;mismatches=0;indels=0;unknowns=0;Target=comp117983_c0_seq1 288 95 .;CDS_Target=comp117983_c0_seq1 188 96 .;locus=RLOC_00022869
Chr2	stalkie_big_nohaplotig	exon	153325031	153325224	100	+	.	Parent=comp117983_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153325032	153325124	.	+	0	Parent=comp117983_c0_seq1.mrna1
Chr2	gffcl	locus	153326901	153327380	.	+	.	ID=RLOC_00022870;geneIDs=comp57882_c0_seq1.path1;transcripts=comp57882_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153326901	153327380	.	+	.	ID=comp57882_c0_seq1.mrna1;geneID=comp57882_c0_seq1.path1;Name=comp57882_c0_seq1;Dir=sensecoverage=96.3;identity=100.0;matches=415;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022870
Chr2	stalkie_big_nohaplotig	exon	153326901	153327094	100	+	.	Parent=comp57882_c0_seq1.mrna1;Target=comp57882_c0_seq1 1 194 +
Chr2	stalkie_big_nohaplotig	exon	153327160	153327380	100	+	.	Parent=comp57882_c0_seq1.mrna1;Target=comp57882_c0_seq1 195 415 +
Chr2	stalkie_big_nohaplotig	CDS	153327070	153327094	.	+	0	Parent=comp57882_c0_seq1.mrna1;Target=comp57882_c0_seq1 170 194 +
Chr2	stalkie_big_nohaplotig	CDS	153327160	153327290	.	+	2	Parent=comp57882_c0_seq1.mrna1;Target=comp57882_c0_seq1 195 325 +
Chr2	gffcl	locus	153330110	153343308	.	-	.	ID=RLOC_00022871;geneIDs=FBgn0039213.1.path1,comp146768_c1_seq1.path1;transcripts=FBgn0039213.1.mrna1,comp146768_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153330110	153333038	.	-	.	ID=FBgn0039213.1.mrna1;geneID=FBgn0039213.1.path1;Name=FBgn0039213.1;Dir=sensecoverage=100.0;identity=99.8;matches=1632;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022871
Chr2	stalkie_big_nohaplotig	exon	153330110	153330235	100	-	.	Parent=FBgn0039213.1.mrna1;Target=FBgn0039213.1 1510 1635 +
Chr2	stalkie_big_nohaplotig	exon	153330295	153330361	100	-	.	Parent=FBgn0039213.1.mrna1;Target=FBgn0039213.1 1443 1509 +
Chr2	stalkie_big_nohaplotig	exon	153330441	153330721	100	-	.	Parent=FBgn0039213.1.mrna1;Target=FBgn0039213.1 1162 1442 +
Chr2	stalkie_big_nohaplotig	exon	153330784	153330939	99	-	.	Parent=FBgn0039213.1.mrna1;Target=FBgn0039213.1 1006 1161 +
Chr2	stalkie_big_nohaplotig	exon	153331966	153332742	99	-	.	Parent=FBgn0039213.1.mrna1;Target=FBgn0039213.1 229 1005 +
Chr2	stalkie_big_nohaplotig	exon	153332811	153333038	99	-	.	Parent=FBgn0039213.1.mrna1;Target=FBgn0039213.1 1 228 +
Chr2	stalkie_big_nohaplotig	CDS	153330110	153330235	.	-	0	Parent=FBgn0039213.1.mrna1;Target=FBgn0039213.1 1510 1635 +
Chr2	stalkie_big_nohaplotig	CDS	153330295	153330361	.	-	1	Parent=FBgn0039213.1.mrna1;Target=FBgn0039213.1 1443 1509 +
Chr2	stalkie_big_nohaplotig	CDS	153330441	153330721	.	-	0	Parent=FBgn0039213.1.mrna1;Target=FBgn0039213.1 1162 1442 +
Chr2	stalkie_big_nohaplotig	CDS	153330784	153330939	.	-	0	Parent=FBgn0039213.1.mrna1;Target=FBgn0039213.1 1006 1161 +
Chr2	stalkie_big_nohaplotig	CDS	153331966	153332742	.	-	0	Parent=FBgn0039213.1.mrna1;Target=FBgn0039213.1 229 1005 +
Chr2	stalkie_big_nohaplotig	CDS	153332811	153333038	.	-	0	Parent=FBgn0039213.1.mrna1;Target=FBgn0039213.1 1 228 +
Chr2	stalkie_big_nohaplotig	mRNA	153333033	153343308	.	-	.	ID=comp146768_c1_seq1.mrna1;geneID=comp146768_c1_seq1.path1;Name=comp146768_c1_seq1;Dir=antisensecoverage=97.1;identity=97.9;matches=599;mismatches=6;indels=7;unknowns=0;Target=comp146768_c1_seq1 443 604 .;locus=RLOC_00022871
Chr2	stalkie_big_nohaplotig	exon	153333033	153333114	97	-	.	Parent=comp146768_c1_seq1.mrna1;Target=comp146768_c1_seq1 1 82 -
Chr2	stalkie_big_nohaplotig	exon	153342779	153343308	97	-	.	Parent=comp146768_c1_seq1.mrna1;Target=comp146768_c1_seq1 83 605 -
Chr2	stalkie_big_nohaplotig	CDS	153343146	153343307	.	-	0	Parent=comp146768_c1_seq1.mrna1
Chr2	gffcl	locus	153335105	153336396	.	-	.	ID=RLOC_00022872;geneIDs=comp147158_c0_seq1.path1;transcripts=comp147158_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153335105	153336396	.	-	.	ID=comp147158_c0_seq1.mrna1;geneID=comp147158_c0_seq1.path1;Name=comp147158_c0_seq1;Dir=sensecoverage=100.0;identity=97.9;matches=1169;mismatches=14;indels=11;unknowns=0;Target=comp147158_c0_seq1 61 246 +;locus=RLOC_00022872
Chr2	stalkie_big_nohaplotig	exon	153335105	153335891	98	-	.	Parent=comp147158_c0_seq1.mrna1;Target=comp147158_c0_seq1 399 1186 +
Chr2	stalkie_big_nohaplotig	exon	153335993	153336396	97	-	.	Parent=comp147158_c0_seq1.mrna1;Target=comp147158_c0_seq1 1 398 +
Chr2	stalkie_big_nohaplotig	CDS	153336151	153336336	.	-	0	Parent=comp147158_c0_seq1.mrna1
Chr2	gffcl	locus	153397360	153423707	.	.	.	ID=RLOC_00022873;geneIDs=comp53632_c0_seq1.path1,comp107955_c0_seq1.path1,comp113908_c1_seq1.path1,comp117159_c0_seq1.path1,comp180645_c0_seq1.path1;transcripts=comp53632_c0_seq1.mrna1,comp180645_c0_seq1.mrna1,comp113908_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153397360	153423707	.	+	.	ID=comp53632_c0_seq1.mrna1;geneID=comp53632_c0_seq1.path1;Name=comp53632_c0_seq1;Dir=indeterminatecoverage=40.7;identity=90.4;matches=375;mismatches=12;indels=28;unknowns=0;Target=comp53632_c0_seq1 353 342 .;locus=RLOC_00022873
Chr2	stalkie_big_nohaplotig	exon	153397360	153397645	98	+	.	Parent=comp53632_c0_seq1.mrna1;Target=comp53632_c0_seq1 625 342 .
Chr2	stalkie_big_nohaplotig	exon	153399937	153399941	100	+	.	Parent=comp53632_c0_seq1.mrna1;Target=comp53632_c0_seq1 630 626 .
Chr2	stalkie_big_nohaplotig	exon	153406639	153406645	85	+	.	Parent=comp53632_c0_seq1.mrna1;Target=comp53632_c0_seq1 637 631 .
Chr2	stalkie_big_nohaplotig	exon	153408149	153408155	100	+	.	Parent=comp53632_c0_seq1.mrna1;Target=comp53632_c0_seq1 644 638 .
Chr2	stalkie_big_nohaplotig	exon	153411988	153411989	100	+	.	Parent=comp53632_c0_seq1.mrna1;Target=comp53632_c0_seq1 646 645 .
Chr2	stalkie_big_nohaplotig	exon	153414253	153414263	100	+	.	Parent=comp53632_c0_seq1.mrna1;Target=comp53632_c0_seq1 657 647 .
Chr2	stalkie_big_nohaplotig	exon	153418648	153418685	50	+	.	Parent=comp53632_c0_seq1.mrna1;Target=comp53632_c0_seq1 731 674 .
Chr2	stalkie_big_nohaplotig	exon	153422613	153422620	100	+	.	Parent=comp53632_c0_seq1.mrna1;Target=comp53632_c0_seq1 739 732 .
Chr2	stalkie_big_nohaplotig	exon	153423559	153423567	100	+	.	Parent=comp53632_c0_seq1.mrna1;Target=comp53632_c0_seq1 798 790 .
Chr2	stalkie_big_nohaplotig	exon	153423693	153423707	71	+	.	Parent=comp53632_c0_seq1.mrna1;Target=comp53632_c0_seq1 825 805 .
Chr2	stalkie_big_nohaplotig	CDS	153397360	153397373	.	+	0	Parent=comp53632_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153414237	153414554	.	+	.	ID=comp180645_c0_seq1.mrna1;geneID=comp180645_c0_seq1.path1;Name=comp180645_c0_seq1;Dir=indeterminatecoverage=97.2;identity=100.0;matches=318;mismatches=0;indels=0;unknowns=0;Target=comp180645_c0_seq1 327 10 .;CDS_Target=comp180645_c0_seq1 322 143 .;locus=RLOC_00022873
Chr2	stalkie_big_nohaplotig	exon	153414237	153414554	100	+	.	Parent=comp180645_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153414370	153414549	.	+	0	Parent=comp180645_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153414772	153415281	.	-	.	ID=comp113908_c1_seq1.mrna1;geneID=comp113908_c1_seq1.path1;Name=comp113908_c1_seq1;Dir=indeterminatecoverage=97.1;identity=97.8;matches=499;mismatches=11;indels=0;unknowns=0;Target=comp113908_c1_seq1 525 16 .;CDS_Target=comp113908_c1_seq1 381 310 .;locus=RLOC_00022873
Chr2	stalkie_big_nohaplotig	exon	153414772	153415281	97	-	.	Parent=comp113908_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153414916	153414987	.	-	0	Parent=comp113908_c1_seq1.mrna1
Chr2	gffcl	locus	153398268	153399783	.	-	.	ID=RLOC_00022874;geneIDs=comp157846_c0_seq1.path1;transcripts=comp157846_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153398268	153399783	.	-	.	ID=comp157846_c0_seq1.mrna1;geneID=comp157846_c0_seq1.path1;Name=comp157846_c0_seq1;Dir=indeterminatecoverage=99.1;identity=97.9;matches=1484;mismatches=29;indels=3;unknowns=0;Target=comp157846_c0_seq1 1513 1 .;CDS_Target=comp157846_c0_seq1 656 456 .;locus=RLOC_00022874
Chr2	stalkie_big_nohaplotig	exon	153398268	153399783	97	-	.	Parent=comp157846_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153399125	153399328	.	-	0	Parent=comp157846_c0_seq1.mrna1
Chr2	gffcl	locus	153400816	153401137	.	-	.	ID=RLOC_00022875;geneIDs=comp141237_c0_seq1.path1;transcripts=comp141237_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153400816	153401137	.	-	.	ID=comp141237_c0_seq1.mrna1;geneID=comp141237_c0_seq1.path1;Name=comp141237_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=321;mismatches=1;indels=0;unknowns=0;Target=comp141237_c0_seq1 322 1 .;CDS_Target=comp141237_c0_seq1 71 3 .;locus=RLOC_00022875
Chr2	stalkie_big_nohaplotig	exon	153400816	153401137	99	-	.	Parent=comp141237_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153401067	153401135	.	-	0	Parent=comp141237_c0_seq1.mrna1
Chr2	gffcl	locus	153403340	153411197	.	+	.	ID=RLOC_00022876;geneIDs=FBgn0037697.1.path1,comp159640_c0_seq1.path1;transcripts=FBgn0037697.1.mrna1,comp159640_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153403340	153410301	.	+	.	ID=FBgn0037697.1.mrna1;geneID=FBgn0037697.1.path1;Name=FBgn0037697.1;Dir=sensecoverage=100.0;identity=100.0;matches=723;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022876
Chr2	stalkie_big_nohaplotig	exon	153403340	153403426	100	+	.	Parent=FBgn0037697.1.mrna1;Target=FBgn0037697.1 1 87 +
Chr2	stalkie_big_nohaplotig	exon	153409401	153409578	100	+	.	Parent=FBgn0037697.1.mrna1;Target=FBgn0037697.1 88 265 +
Chr2	stalkie_big_nohaplotig	exon	153409661	153409991	100	+	.	Parent=FBgn0037697.1.mrna1;Target=FBgn0037697.1 266 596 +
Chr2	stalkie_big_nohaplotig	exon	153410175	153410301	100	+	.	Parent=FBgn0037697.1.mrna1;Target=FBgn0037697.1 597 723 +
Chr2	stalkie_big_nohaplotig	CDS	153403340	153403426	.	+	0	Parent=FBgn0037697.1.mrna1;Target=FBgn0037697.1 1 87 +
Chr2	stalkie_big_nohaplotig	CDS	153409401	153409578	.	+	0	Parent=FBgn0037697.1.mrna1;Target=FBgn0037697.1 88 265 +
Chr2	stalkie_big_nohaplotig	CDS	153409661	153409991	.	+	2	Parent=FBgn0037697.1.mrna1;Target=FBgn0037697.1 266 596 +
Chr2	stalkie_big_nohaplotig	CDS	153410175	153410301	.	+	1	Parent=FBgn0037697.1.mrna1;Target=FBgn0037697.1 597 723 +
Chr2	stalkie_big_nohaplotig	mRNA	153408778	153411197	.	+	.	ID=comp159640_c0_seq1.mrna1;geneID=comp159640_c0_seq1.path1;Name=comp159640_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=2149;mismatches=5;indels=3;unknowns=0;locus=RLOC_00022876
Chr2	stalkie_big_nohaplotig	exon	153408778	153409578	99	+	.	Parent=comp159640_c0_seq1.mrna1;Target=comp159640_c0_seq1 2 803 +
Chr2	stalkie_big_nohaplotig	exon	153409661	153409991	100	+	.	Parent=comp159640_c0_seq1.mrna1;Target=comp159640_c0_seq1 804 1134 +
Chr2	stalkie_big_nohaplotig	exon	153410175	153411197	99	+	.	Parent=comp159640_c0_seq1.mrna1;Target=comp159640_c0_seq1 1135 2157 +
Chr2	stalkie_big_nohaplotig	CDS	153409212	153409578	.	+	0	Parent=comp159640_c0_seq1.mrna1;Target=comp159640_c0_seq1 437 803 +
Chr2	stalkie_big_nohaplotig	CDS	153409661	153409991	.	+	2	Parent=comp159640_c0_seq1.mrna1;Target=comp159640_c0_seq1 804 1134 +
Chr2	stalkie_big_nohaplotig	CDS	153410175	153410304	.	+	1	Parent=comp159640_c0_seq1.mrna1;Target=comp159640_c0_seq1 1135 1264 +
Chr2	gffcl	locus	153415735	153449612	.	.	.	ID=RLOC_00022877;geneIDs=comp86785_c0_seq1.path2,comp135673_c0_seq1.path1,comp159718_c0_seq1.path1;transcripts=comp135673_c0_seq1.mrna1,comp159718_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153415735	153449612	.	-	.	ID=comp135673_c0_seq1.mrna1;geneID=comp135673_c0_seq1.path1;Name=comp135673_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.6;matches=368;mismatches=8;indels=1;unknowns=0;locus=RLOC_00022877
Chr2	stalkie_big_nohaplotig	exon	153415735	153416039	98	-	.	Parent=comp135673_c0_seq1.mrna1;Target=comp135673_c0_seq1 377 73 .
Chr2	stalkie_big_nohaplotig	exon	153418468	153418478	90	-	.	Parent=comp135673_c0_seq1.mrna1;Target=comp135673_c0_seq1 72 62 .
Chr2	stalkie_big_nohaplotig	exon	153423088	153423096	100	-	.	Parent=comp135673_c0_seq1.mrna1;Target=comp135673_c0_seq1 61 53 .
Chr2	stalkie_big_nohaplotig	exon	153425629	153425631	100	-	.	Parent=comp135673_c0_seq1.mrna1;Target=comp135673_c0_seq1 52 50 .
Chr2	stalkie_big_nohaplotig	exon	153431033	153431034	100	-	.	Parent=comp135673_c0_seq1.mrna1;Target=comp135673_c0_seq1 49 48 .
Chr2	stalkie_big_nohaplotig	exon	153445468	153445473	100	-	.	Parent=comp135673_c0_seq1.mrna1;Target=comp135673_c0_seq1 47 42 .
Chr2	stalkie_big_nohaplotig	exon	153448608	153448611	100	-	.	Parent=comp135673_c0_seq1.mrna1;Target=comp135673_c0_seq1 41 38 .
Chr2	stalkie_big_nohaplotig	exon	153448733	153448744	83	-	.	Parent=comp135673_c0_seq1.mrna1;Target=comp135673_c0_seq1 37 26 .
Chr2	stalkie_big_nohaplotig	exon	153449589	153449612	92	-	.	Parent=comp135673_c0_seq1.mrna1;Target=comp135673_c0_seq1 25 1 .
Chr2	stalkie_big_nohaplotig	CDS	153416012	153416039	.	-	2	Parent=comp135673_c0_seq1.mrna1;Target=comp135673_c0_seq1 100 73 .
Chr2	stalkie_big_nohaplotig	CDS	153418468	153418478	.	-	1	Parent=comp135673_c0_seq1.mrna1;Target=comp135673_c0_seq1 72 62 .
Chr2	stalkie_big_nohaplotig	CDS	153423088	153423096	.	-	1	Parent=comp135673_c0_seq1.mrna1;Target=comp135673_c0_seq1 61 53 .
Chr2	stalkie_big_nohaplotig	CDS	153425629	153425631	.	-	1	Parent=comp135673_c0_seq1.mrna1;Target=comp135673_c0_seq1 52 50 .
Chr2	stalkie_big_nohaplotig	CDS	153431033	153431034	.	-	0	Parent=comp135673_c0_seq1.mrna1;Target=comp135673_c0_seq1 49 48 .
Chr2	stalkie_big_nohaplotig	CDS	153445468	153445473	.	-	0	Parent=comp135673_c0_seq1.mrna1;Target=comp135673_c0_seq1 47 42 .
Chr2	stalkie_big_nohaplotig	CDS	153448608	153448611	.	-	1	Parent=comp135673_c0_seq1.mrna1;Target=comp135673_c0_seq1 41 38 .
Chr2	stalkie_big_nohaplotig	CDS	153448733	153448744	.	-	1	Parent=comp135673_c0_seq1.mrna1;Target=comp135673_c0_seq1 37 26 .
Chr2	stalkie_big_nohaplotig	CDS	153449589	153449611	.	-	0	Parent=comp135673_c0_seq1.mrna1;Target=comp135673_c0_seq1 25 2 .
Chr2	stalkie_big_nohaplotig	mRNA	153416595	153418484	.	+	.	ID=comp159718_c0_seq1.mrna1;geneID=comp159718_c0_seq1.path1;Name=comp159718_c0_seq1;Dir=indeterminatecoverage=99.5;identity=98.9;matches=1874;mismatches=16;indels=4;unknowns=0;Target=comp159718_c0_seq1 1894 1 .;CDS_Target=comp159718_c0_seq1 1892 1722 .;locus=RLOC_00022877
Chr2	stalkie_big_nohaplotig	exon	153416595	153418484	98	+	.	Parent=comp159718_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153418312	153418482	.	+	0	Parent=comp159718_c0_seq1.mrna1
Chr2	gffcl	locus	153419506	153421767	.	-	.	ID=RLOC_00022878;geneIDs=comp148995_c1_seq1.path1,comp151374_c0_seq1.path1;transcripts=comp148995_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153419506	153420843	.	-	.	ID=comp148995_c1_seq1.mrna1;geneID=comp148995_c1_seq1.path1;Name=comp148995_c1_seq1;Dir=indeterminatecoverage=98.8;identity=99.2;matches=1327;mismatches=6;indels=5;unknowns=0;Target=comp148995_c1_seq1 1349 17 .;CDS_Target=comp148995_c1_seq1 197 18 .;locus=RLOC_00022878
Chr2	stalkie_big_nohaplotig	exon	153419506	153420843	99	-	.	Parent=comp148995_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153420658	153420842	.	-	0	Parent=comp148995_c1_seq1.mrna1
Chr2	gffcl	locus	153426410	153427429	.	+	.	ID=RLOC_00022879;geneIDs=comp232344_c0_seq1.path1;transcripts=comp232344_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153426410	153427429	.	+	.	ID=comp232344_c0_seq1.mrna1;geneID=comp232344_c0_seq1.path1;Name=comp232344_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.7;matches=1019;mismatches=1;indels=2;unknowns=0;Target=comp232344_c0_seq1 1022 1 .;CDS_Target=comp232344_c0_seq1 654 574 .;locus=RLOC_00022879
Chr2	stalkie_big_nohaplotig	exon	153426410	153427429	99	+	.	Parent=comp232344_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153426981	153427061	.	+	0	Parent=comp232344_c0_seq1.mrna1
Chr2	gffcl	locus	153427559	153691215	.	+	.	ID=RLOC_00022880;geneIDs=comp144500_c0_seq1.path1;transcripts=comp144500_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153427559	153691215	.	+	.	ID=comp144500_c0_seq1.mrna1;geneID=comp144500_c0_seq1.path1;Name=comp144500_c0_seq1;Dir=indeterminatecoverage=58.2;identity=98.0;matches=1588;mismatches=10;indels=23;unknowns=0;Target=comp144500_c0_seq1 635 522 .;locus=RLOC_00022880
Chr2	stalkie_big_nohaplotig	exon	153427559	153428949	97	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1434 39 .
Chr2	stalkie_big_nohaplotig	exon	153429149	153429157	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1443 1435 .
Chr2	stalkie_big_nohaplotig	exon	153430970	153430974	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1448 1444 .
Chr2	stalkie_big_nohaplotig	exon	153438008	153438012	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1453 1449 .
Chr2	stalkie_big_nohaplotig	exon	153442810	153442813	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1457 1454 .
Chr2	stalkie_big_nohaplotig	exon	153456434	153456436	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1460 1458 .
Chr2	stalkie_big_nohaplotig	exon	153462699	153462708	80	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1470 1461 .
Chr2	stalkie_big_nohaplotig	exon	153466090	153466097	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1478 1471 .
Chr2	stalkie_big_nohaplotig	exon	153472389	153472394	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1484 1479 .
Chr2	stalkie_big_nohaplotig	exon	153473350	153473353	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1488 1485 .
Chr2	stalkie_big_nohaplotig	exon	153475521	153475522	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1490 1489 .
Chr2	stalkie_big_nohaplotig	exon	153477569	153477571	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1493 1491 .
Chr2	stalkie_big_nohaplotig	exon	153479737	153479738	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1495 1494 .
Chr2	stalkie_big_nohaplotig	exon	153485878	153485891	92	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1509 1496 .
Chr2	stalkie_big_nohaplotig	exon	153487138	153487146	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1518 1510 .
Chr2	stalkie_big_nohaplotig	exon	153489099	153489102	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1522 1519 .
Chr2	stalkie_big_nohaplotig	exon	153489249	153489261	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1535 1523 .
Chr2	stalkie_big_nohaplotig	exon	153489427	153489432	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1541 1536 .
Chr2	stalkie_big_nohaplotig	exon	153495759	153495766	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1549 1542 .
Chr2	stalkie_big_nohaplotig	exon	153498575	153498577	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1552 1550 .
Chr2	stalkie_big_nohaplotig	exon	153506305	153506309	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1557 1553 .
Chr2	stalkie_big_nohaplotig	exon	153529600	153529601	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1559 1558 .
Chr2	stalkie_big_nohaplotig	exon	153534582	153534588	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1566 1560 .
Chr2	stalkie_big_nohaplotig	exon	153537446	153537450	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1571 1567 .
Chr2	stalkie_big_nohaplotig	exon	153543613	153543623	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1582 1572 .
Chr2	stalkie_big_nohaplotig	exon	153570816	153570819	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1586 1583 .
Chr2	stalkie_big_nohaplotig	exon	153573140	153573141	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1588 1587 .
Chr2	stalkie_big_nohaplotig	exon	153601699	153601705	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1595 1589 .
Chr2	stalkie_big_nohaplotig	exon	153609693	153609699	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1602 1596 .
Chr2	stalkie_big_nohaplotig	exon	153617121	153617122	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1604 1603 .
Chr2	stalkie_big_nohaplotig	exon	153624897	153624906	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1614 1605 .
Chr2	stalkie_big_nohaplotig	exon	153641050	153641053	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1618 1615 .
Chr2	stalkie_big_nohaplotig	exon	153649276	153649279	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1622 1619 .
Chr2	stalkie_big_nohaplotig	exon	153657248	153657249	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1624 1623 .
Chr2	stalkie_big_nohaplotig	exon	153660958	153660960	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1627 1625 .
Chr2	stalkie_big_nohaplotig	exon	153666228	153666230	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1630 1628 .
Chr2	stalkie_big_nohaplotig	exon	153669690	153669691	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1632 1631 .
Chr2	stalkie_big_nohaplotig	exon	153671497	153671498	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1634 1633 .
Chr2	stalkie_big_nohaplotig	exon	153684368	153684376	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1643 1635 .
Chr2	stalkie_big_nohaplotig	exon	153691209	153691215	100	+	.	Parent=comp144500_c0_seq1.mrna1;Target=comp144500_c0_seq1 1650 1644 .
Chr2	stalkie_big_nohaplotig	CDS	153428041	153428154	.	+	0	Parent=comp144500_c0_seq1.mrna1
Chr2	gffcl	locus	153429993	153495852	.	-	.	ID=RLOC_00022881;geneIDs=FBgn0261552.1.path1,comp162942_c2_seq1.path1;transcripts=FBgn0261552.1.mrna1,comp162942_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153429993	153471518	.	-	.	ID=FBgn0261552.1.mrna1;geneID=FBgn0261552.1.path1;Name=FBgn0261552.1;Dir=sensecoverage=100.0;identity=99.9;matches=1748;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022881
Chr2	stalkie_big_nohaplotig	exon	153429993	153430210	100	-	.	Parent=FBgn0261552.1.mrna1;Target=FBgn0261552.1 1532 1749 +
Chr2	stalkie_big_nohaplotig	exon	153433331	153433886	100	-	.	Parent=FBgn0261552.1.mrna1;Target=FBgn0261552.1 976 1531 +
Chr2	stalkie_big_nohaplotig	exon	153433957	153434597	99	-	.	Parent=FBgn0261552.1.mrna1;Target=FBgn0261552.1 335 975 +
Chr2	stalkie_big_nohaplotig	exon	153434688	153434831	100	-	.	Parent=FBgn0261552.1.mrna1;Target=FBgn0261552.1 191 334 +
Chr2	stalkie_big_nohaplotig	exon	153471329	153471518	100	-	.	Parent=FBgn0261552.1.mrna1;Target=FBgn0261552.1 1 190 +
Chr2	stalkie_big_nohaplotig	CDS	153429993	153430210	.	-	2	Parent=FBgn0261552.1.mrna1;Target=FBgn0261552.1 1532 1749 +
Chr2	stalkie_big_nohaplotig	CDS	153433331	153433886	.	-	0	Parent=FBgn0261552.1.mrna1;Target=FBgn0261552.1 976 1531 +
Chr2	stalkie_big_nohaplotig	CDS	153433957	153434597	.	-	2	Parent=FBgn0261552.1.mrna1;Target=FBgn0261552.1 335 975 +
Chr2	stalkie_big_nohaplotig	CDS	153434688	153434831	.	-	2	Parent=FBgn0261552.1.mrna1;Target=FBgn0261552.1 191 334 +
Chr2	stalkie_big_nohaplotig	CDS	153471329	153471518	.	-	0	Parent=FBgn0261552.1.mrna1;Target=FBgn0261552.1 1 190 +
Chr2	stalkie_big_nohaplotig	mRNA	153432401	153495852	.	-	.	ID=comp162942_c2_seq1.mrna1;geneID=comp162942_c2_seq1.path1;Name=comp162942_c2_seq1;Dir=antisensecoverage=64.0;identity=99.8;matches=3632;mismatches=5;indels=4;unknowns=0;locus=RLOC_00022881
Chr2	stalkie_big_nohaplotig	exon	153432401	153433886	99	-	.	Parent=comp162942_c2_seq1.mrna1;Target=comp162942_c2_seq1 2050 3536 -
Chr2	stalkie_big_nohaplotig	exon	153433957	153434597	99	-	.	Parent=comp162942_c2_seq1.mrna1;Target=comp162942_c2_seq1 3537 4177 -
Chr2	stalkie_big_nohaplotig	exon	153434688	153434831	100	-	.	Parent=comp162942_c2_seq1.mrna1;Target=comp162942_c2_seq1 4178 4321 -
Chr2	stalkie_big_nohaplotig	exon	153471329	153472136	99	-	.	Parent=comp162942_c2_seq1.mrna1;Target=comp162942_c2_seq1 4322 5131 -
Chr2	stalkie_big_nohaplotig	exon	153495071	153495213	100	-	.	Parent=comp162942_c2_seq1.mrna1;Target=comp162942_c2_seq1 5132 5274 -
Chr2	stalkie_big_nohaplotig	exon	153495437	153495852	99	-	.	Parent=comp162942_c2_seq1.mrna1;Target=comp162942_c2_seq1 5275 5689 -
Chr2	stalkie_big_nohaplotig	CDS	153433299	153433886	.	-	0	Parent=comp162942_c2_seq1.mrna1;Target=comp162942_c2_seq1 2949 3536 .
Chr2	stalkie_big_nohaplotig	CDS	153433957	153434597	.	-	2	Parent=comp162942_c2_seq1.mrna1;Target=comp162942_c2_seq1 3537 4177 .
Chr2	stalkie_big_nohaplotig	CDS	153434688	153434831	.	-	2	Parent=comp162942_c2_seq1.mrna1;Target=comp162942_c2_seq1 4178 4321 .
Chr2	stalkie_big_nohaplotig	CDS	153471329	153471446	.	-	0	Parent=comp162942_c2_seq1.mrna1;Target=comp162942_c2_seq1 4322 4439 .
Chr2	gffcl	locus	153483498	153484277	.	+	.	ID=RLOC_00022882;geneIDs=comp125064_c0_seq1.path1;transcripts=comp125064_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153483498	153484277	.	+	.	ID=comp125064_c0_seq1.mrna1;geneID=comp125064_c0_seq1.path1;Name=comp125064_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=709;mismatches=0;indels=0;unknowns=0;Target=comp125064_c0_seq1 504 707 .;locus=RLOC_00022882
Chr2	stalkie_big_nohaplotig	exon	153483498	153483776	100	+	.	Parent=comp125064_c0_seq1.mrna1;Target=comp125064_c0_seq1 431 709 -
Chr2	stalkie_big_nohaplotig	exon	153483848	153484277	100	+	.	Parent=comp125064_c0_seq1.mrna1;Target=comp125064_c0_seq1 1 430 -
Chr2	stalkie_big_nohaplotig	CDS	153483500	153483703	.	+	0	Parent=comp125064_c0_seq1.mrna1
Chr2	gffcl	locus	153501143	153501468	.	-	.	ID=RLOC_00022883;geneIDs=comp119290_c1_seq1.path1;transcripts=comp119290_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153501143	153501468	.	-	.	ID=comp119290_c1_seq1.mrna1;geneID=comp119290_c1_seq1.path1;Name=comp119290_c1_seq1;Dir=sensecoverage=96.4;identity=100.0;matches=265;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022883
Chr2	stalkie_big_nohaplotig	exon	153501143	153501259	100	-	.	Parent=comp119290_c1_seq1.mrna1;Target=comp119290_c1_seq1 159 275 +
Chr2	stalkie_big_nohaplotig	exon	153501321	153501468	100	-	.	Parent=comp119290_c1_seq1.mrna1;Target=comp119290_c1_seq1 11 158 +
Chr2	stalkie_big_nohaplotig	CDS	153501144	153501259	.	-	2	Parent=comp119290_c1_seq1.mrna1;Target=comp119290_c1_seq1 159 274 +
Chr2	stalkie_big_nohaplotig	CDS	153501321	153501468	.	-	0	Parent=comp119290_c1_seq1.mrna1;Target=comp119290_c1_seq1 11 158 +
Chr2	gffcl	locus	153503217	153510194	.	-	.	ID=RLOC_00022884;geneIDs=FBgn0011740.2.path1;transcripts=FBgn0011740.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153503217	153510194	.	-	.	ID=FBgn0011740.2.mrna1;geneID=FBgn0011740.2.path1;Name=FBgn0011740.2;Dir=sensecoverage=100.0;identity=99.6;matches=3269;mismatches=13;indels=0;unknowns=0;locus=RLOC_00022884
Chr2	stalkie_big_nohaplotig	exon	153503217	153503378	100	-	.	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 3121 3282 +
Chr2	stalkie_big_nohaplotig	exon	153503483	153504040	99	-	.	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 2563 3120 +
Chr2	stalkie_big_nohaplotig	exon	153504157	153504673	98	-	.	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 2046 2562 +
Chr2	stalkie_big_nohaplotig	exon	153504732	153504900	99	-	.	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 1877 2045 +
Chr2	stalkie_big_nohaplotig	exon	153507186	153507384	100	-	.	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 1678 1876 +
Chr2	stalkie_big_nohaplotig	exon	153507443	153508031	99	-	.	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 1089 1677 +
Chr2	stalkie_big_nohaplotig	exon	153508101	153508287	98	-	.	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 902 1088 +
Chr2	stalkie_big_nohaplotig	exon	153508446	153508747	100	-	.	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 600 901 +
Chr2	stalkie_big_nohaplotig	exon	153508806	153508977	100	-	.	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 428 599 +
Chr2	stalkie_big_nohaplotig	exon	153509631	153509778	100	-	.	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 280 427 +
Chr2	stalkie_big_nohaplotig	exon	153509840	153510022	100	-	.	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 97 279 +
Chr2	stalkie_big_nohaplotig	exon	153510099	153510194	100	-	.	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 1 96 +
Chr2	stalkie_big_nohaplotig	CDS	153503217	153503378	.	-	0	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 3121 3282 +
Chr2	stalkie_big_nohaplotig	CDS	153503483	153504040	.	-	0	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 2563 3120 +
Chr2	stalkie_big_nohaplotig	CDS	153504157	153504673	.	-	1	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 2046 2562 +
Chr2	stalkie_big_nohaplotig	CDS	153504732	153504900	.	-	2	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 1877 2045 +
Chr2	stalkie_big_nohaplotig	CDS	153507186	153507384	.	-	0	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 1678 1876 +
Chr2	stalkie_big_nohaplotig	CDS	153507443	153508031	.	-	1	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 1089 1677 +
Chr2	stalkie_big_nohaplotig	CDS	153508101	153508287	.	-	2	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 902 1088 +
Chr2	stalkie_big_nohaplotig	CDS	153508446	153508747	.	-	1	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 600 901 +
Chr2	stalkie_big_nohaplotig	CDS	153508806	153508977	.	-	2	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 428 599 +
Chr2	stalkie_big_nohaplotig	CDS	153509631	153509778	.	-	0	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 280 427 +
Chr2	stalkie_big_nohaplotig	CDS	153509840	153510022	.	-	0	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 97 279 +
Chr2	stalkie_big_nohaplotig	CDS	153510099	153510194	.	-	0	Parent=FBgn0011740.2.mrna1;Target=FBgn0011740.2 1 96 +
Chr2	gffcl	locus	153512132	153516785	.	-	.	ID=RLOC_00022885;geneIDs=FBgn0011740.1.path1;transcripts=FBgn0011740.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153512132	153516785	.	-	.	ID=FBgn0011740.1.mrna1;geneID=FBgn0011740.1.path1;Name=FBgn0011740.1;Dir=sensecoverage=100.0;identity=99.9;matches=3469;mismatches=5;indels=0;unknowns=0;locus=RLOC_00022885
Chr2	stalkie_big_nohaplotig	exon	153512132	153512284	100	-	.	Parent=FBgn0011740.1.mrna1;Target=FBgn0011740.1 3322 3474 +
Chr2	stalkie_big_nohaplotig	exon	153512654	153513235	99	-	.	Parent=FBgn0011740.1.mrna1;Target=FBgn0011740.1 2740 3321 +
Chr2	stalkie_big_nohaplotig	exon	153513303	153513816	100	-	.	Parent=FBgn0011740.1.mrna1;Target=FBgn0011740.1 2226 2739 +
Chr2	stalkie_big_nohaplotig	exon	153513920	153514302	100	-	.	Parent=FBgn0011740.1.mrna1;Target=FBgn0011740.1 1843 2225 +
Chr2	stalkie_big_nohaplotig	exon	153514364	153514949	100	-	.	Parent=FBgn0011740.1.mrna1;Target=FBgn0011740.1 1257 1842 +
Chr2	stalkie_big_nohaplotig	exon	153515015	153515201	100	-	.	Parent=FBgn0011740.1.mrna1;Target=FBgn0011740.1 1070 1256 +
Chr2	stalkie_big_nohaplotig	exon	153515263	153515564	100	-	.	Parent=FBgn0011740.1.mrna1;Target=FBgn0011740.1 768 1069 +
Chr2	stalkie_big_nohaplotig	exon	153515623	153515794	100	-	.	Parent=FBgn0011740.1.mrna1;Target=FBgn0011740.1 596 767 +
Chr2	stalkie_big_nohaplotig	exon	153515849	153515996	100	-	.	Parent=FBgn0011740.1.mrna1;Target=FBgn0011740.1 448 595 +
Chr2	stalkie_big_nohaplotig	exon	153516064	153516294	100	-	.	Parent=FBgn0011740.1.mrna1;Target=FBgn0011740.1 217 447 +
Chr2	stalkie_big_nohaplotig	exon	153516570	153516785	99	-	.	Parent=FBgn0011740.1.mrna1;Target=FBgn0011740.1 1 216 +
Chr2	stalkie_big_nohaplotig	CDS	153512132	153512284	.	-	0	Parent=FBgn0011740.1.mrna1;Target=FBgn0011740.1 3322 3474 +
Chr2	stalkie_big_nohaplotig	CDS	153512654	153513235	.	-	0	Parent=FBgn0011740.1.mrna1;Target=FBgn0011740.1 2740 3321 +
Chr2	stalkie_big_nohaplotig	CDS	153513303	153513816	.	-	1	Parent=FBgn0011740.1.mrna1;Target=FBgn0011740.1 2226 2739 +
Chr2	stalkie_big_nohaplotig	CDS	153513920	153514302	.	-	0	Parent=FBgn0011740.1.mrna1;Target=FBgn0011740.1 1843 2225 +
Chr2	stalkie_big_nohaplotig	CDS	153514364	153514949	.	-	1	Parent=FBgn0011740.1.mrna1;Target=FBgn0011740.1 1257 1842 +
Chr2	stalkie_big_nohaplotig	CDS	153515015	153515201	.	-	2	Parent=FBgn0011740.1.mrna1;Target=FBgn0011740.1 1070 1256 +
Chr2	stalkie_big_nohaplotig	CDS	153515263	153515564	.	-	1	Parent=FBgn0011740.1.mrna1;Target=FBgn0011740.1 768 1069 +
Chr2	stalkie_big_nohaplotig	CDS	153515623	153515794	.	-	2	Parent=FBgn0011740.1.mrna1;Target=FBgn0011740.1 596 767 +
Chr2	stalkie_big_nohaplotig	CDS	153515849	153515996	.	-	0	Parent=FBgn0011740.1.mrna1;Target=FBgn0011740.1 448 595 +
Chr2	stalkie_big_nohaplotig	CDS	153516064	153516294	.	-	0	Parent=FBgn0011740.1.mrna1;Target=FBgn0011740.1 217 447 +
Chr2	stalkie_big_nohaplotig	CDS	153516570	153516785	.	-	0	Parent=FBgn0011740.1.mrna1;Target=FBgn0011740.1 1 216 +
Chr2	gffcl	locus	153520085	153521935	.	+	.	ID=RLOC_00022886;geneIDs=FBgn0039169.1.path1;transcripts=FBgn0039169.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153520085	153521935	.	+	.	ID=FBgn0039169.1.mrna1;geneID=FBgn0039169.1.path1;Name=FBgn0039169.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1848;mismatches=0;indels=6;unknowns=0;Target=FBgn0039169.1 1851 1 .;locus=RLOC_00022886
Chr2	stalkie_big_nohaplotig	exon	153520085	153521935	99	+	.	Parent=FBgn0039169.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153520085	153521935	.	+	0	Parent=FBgn0039169.1.mrna1
Chr2	gffcl	locus	153526707	153561353	.	+	.	ID=RLOC_00022887;geneIDs=FBgn0011725.1.path1;transcripts=FBgn0011725.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153526707	153561353	.	+	.	ID=FBgn0011725.1.mrna1;geneID=FBgn0011725.1.path1;Name=FBgn0011725.1;Dir=sensecoverage=100.0;identity=99.5;matches=1714;mismatches=8;indels=0;unknowns=0;locus=RLOC_00022887
Chr2	stalkie_big_nohaplotig	exon	153526707	153526747	100	+	.	Parent=FBgn0011725.1.mrna1;Target=FBgn0011725.1 1 41 +
Chr2	stalkie_big_nohaplotig	exon	153527814	153527845	100	+	.	Parent=FBgn0011725.1.mrna1;Target=FBgn0011725.1 42 73 +
Chr2	stalkie_big_nohaplotig	exon	153528067	153528195	100	+	.	Parent=FBgn0011725.1.mrna1;Target=FBgn0011725.1 74 202 +
Chr2	stalkie_big_nohaplotig	exon	153528261	153528447	100	+	.	Parent=FBgn0011725.1.mrna1;Target=FBgn0011725.1 203 389 +
Chr2	stalkie_big_nohaplotig	exon	153528519	153528694	100	+	.	Parent=FBgn0011725.1.mrna1;Target=FBgn0011725.1 390 565 +
Chr2	stalkie_big_nohaplotig	exon	153559000	153559068	100	+	.	Parent=FBgn0011725.1.mrna1;Target=FBgn0011725.1 566 634 +
Chr2	stalkie_big_nohaplotig	exon	153559141	153559453	99	+	.	Parent=FBgn0011725.1.mrna1;Target=FBgn0011725.1 635 947 +
Chr2	stalkie_big_nohaplotig	exon	153560579	153561353	99	+	.	Parent=FBgn0011725.1.mrna1;Target=FBgn0011725.1 948 1722 +
Chr2	stalkie_big_nohaplotig	CDS	153526707	153526747	.	+	0	Parent=FBgn0011725.1.mrna1;Target=FBgn0011725.1 1 41 +
Chr2	stalkie_big_nohaplotig	CDS	153527814	153527845	.	+	1	Parent=FBgn0011725.1.mrna1;Target=FBgn0011725.1 42 73 +
Chr2	stalkie_big_nohaplotig	CDS	153528067	153528195	.	+	2	Parent=FBgn0011725.1.mrna1;Target=FBgn0011725.1 74 202 +
Chr2	stalkie_big_nohaplotig	CDS	153528261	153528447	.	+	2	Parent=FBgn0011725.1.mrna1;Target=FBgn0011725.1 203 389 +
Chr2	stalkie_big_nohaplotig	CDS	153528519	153528694	.	+	1	Parent=FBgn0011725.1.mrna1;Target=FBgn0011725.1 390 565 +
Chr2	stalkie_big_nohaplotig	CDS	153559000	153559068	.	+	2	Parent=FBgn0011725.1.mrna1;Target=FBgn0011725.1 566 634 +
Chr2	stalkie_big_nohaplotig	CDS	153559141	153559453	.	+	2	Parent=FBgn0011725.1.mrna1;Target=FBgn0011725.1 635 947 +
Chr2	stalkie_big_nohaplotig	CDS	153560579	153561353	.	+	1	Parent=FBgn0011725.1.mrna1;Target=FBgn0011725.1 948 1722 +
Chr2	gffcl	locus	153540130	153540992	.	+	.	ID=RLOC_00022889;geneIDs=comp143763_c0_seq1.path1;transcripts=comp143763_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153540130	153540992	.	+	.	ID=comp143763_c0_seq1.mrna1;geneID=comp143763_c0_seq1.path1;Name=comp143763_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=858;mismatches=4;indels=1;unknowns=0;Target=comp143763_c0_seq1 862 1 .;CDS_Target=comp143763_c0_seq1 191 3 .;locus=RLOC_00022889
Chr2	stalkie_big_nohaplotig	exon	153540130	153540992	99	+	.	Parent=comp143763_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153540132	153540320	.	+	0	Parent=comp143763_c0_seq1.mrna1
Chr2	gffcl	locus	153562588	153563202	.	-	.	ID=RLOC_00022890;geneIDs=comp143589_c0_seq1.path1;transcripts=comp143589_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153562588	153563202	.	-	.	ID=comp143589_c0_seq1.mrna1;geneID=comp143589_c0_seq1.path1;Name=comp143589_c0_seq1;Dir=indeterminatecoverage=81.7;identity=91.0;matches=483;mismatches=8;indels=40;unknowns=0;Target=comp143589_c0_seq1 562 488 .;locus=RLOC_00022890
Chr2	stalkie_big_nohaplotig	exon	153562588	153563032	97	-	.	Parent=comp143589_c0_seq1.mrna1;Target=comp143589_c0_seq1 650 194 .
Chr2	stalkie_big_nohaplotig	exon	153563157	153563202	52	-	.	Parent=comp143589_c0_seq1.mrna1;Target=comp143589_c0_seq1 193 120 .
Chr2	stalkie_big_nohaplotig	CDS	153562676	153562750	.	-	0	Parent=comp143589_c0_seq1.mrna1
Chr2	gffcl	locus	153564001	153564470	.	-	.	ID=RLOC_00022891;geneIDs=comp65008_c0_seq1.path1;transcripts=comp65008_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153564001	153564470	.	-	.	ID=comp65008_c0_seq1.mrna1;geneID=comp65008_c0_seq1.path1;Name=comp65008_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=470;mismatches=0;indels=4;unknowns=0;Target=comp65008_c0_seq1 474 1 .;CDS_Target=comp65008_c0_seq1 105 1 .;locus=RLOC_00022891
Chr2	stalkie_big_nohaplotig	exon	153564001	153564470	99	-	.	Parent=comp65008_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153564366	153564470	.	-	0	Parent=comp65008_c0_seq1.mrna1
Chr2	gffcl	locus	153565928	153569423	.	-	.	ID=RLOC_00022892;geneIDs=FBgn0039165.1.path1;transcripts=FBgn0039165.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153565928	153569423	.	-	.	ID=FBgn0039165.1.mrna1;geneID=FBgn0039165.1.path1;Name=FBgn0039165.1;Dir=sensecoverage=100.0;identity=99.1;matches=2844;mismatches=27;indels=0;unknowns=0;locus=RLOC_00022892
Chr2	stalkie_big_nohaplotig	exon	153565928	153566212	98	-	.	Parent=FBgn0039165.1.mrna1;Target=FBgn0039165.1 2587 2871 +
Chr2	stalkie_big_nohaplotig	exon	153566262	153566411	98	-	.	Parent=FBgn0039165.1.mrna1;Target=FBgn0039165.1 2437 2586 +
Chr2	stalkie_big_nohaplotig	exon	153566473	153566816	99	-	.	Parent=FBgn0039165.1.mrna1;Target=FBgn0039165.1 2093 2436 +
Chr2	stalkie_big_nohaplotig	exon	153566909	153567557	98	-	.	Parent=FBgn0039165.1.mrna1;Target=FBgn0039165.1 1444 2092 +
Chr2	stalkie_big_nohaplotig	exon	153567674	153567841	98	-	.	Parent=FBgn0039165.1.mrna1;Target=FBgn0039165.1 1276 1443 +
Chr2	stalkie_big_nohaplotig	exon	153567902	153568351	98	-	.	Parent=FBgn0039165.1.mrna1;Target=FBgn0039165.1 826 1275 +
Chr2	stalkie_big_nohaplotig	exon	153568419	153568490	100	-	.	Parent=FBgn0039165.1.mrna1;Target=FBgn0039165.1 754 825 +
Chr2	stalkie_big_nohaplotig	exon	153568551	153568945	100	-	.	Parent=FBgn0039165.1.mrna1;Target=FBgn0039165.1 359 753 +
Chr2	stalkie_big_nohaplotig	exon	153569012	153569230	100	-	.	Parent=FBgn0039165.1.mrna1;Target=FBgn0039165.1 140 358 +
Chr2	stalkie_big_nohaplotig	exon	153569285	153569423	100	-	.	Parent=FBgn0039165.1.mrna1;Target=FBgn0039165.1 1 139 +
Chr2	stalkie_big_nohaplotig	CDS	153565928	153566212	.	-	0	Parent=FBgn0039165.1.mrna1;Target=FBgn0039165.1 2587 2871 +
Chr2	stalkie_big_nohaplotig	CDS	153566262	153566411	.	-	0	Parent=FBgn0039165.1.mrna1;Target=FBgn0039165.1 2437 2586 +
Chr2	stalkie_big_nohaplotig	CDS	153566473	153566816	.	-	2	Parent=FBgn0039165.1.mrna1;Target=FBgn0039165.1 2093 2436 +
Chr2	stalkie_big_nohaplotig	CDS	153566909	153567557	.	-	0	Parent=FBgn0039165.1.mrna1;Target=FBgn0039165.1 1444 2092 +
Chr2	stalkie_big_nohaplotig	CDS	153567674	153567841	.	-	0	Parent=FBgn0039165.1.mrna1;Target=FBgn0039165.1 1276 1443 +
Chr2	stalkie_big_nohaplotig	CDS	153567902	153568351	.	-	0	Parent=FBgn0039165.1.mrna1;Target=FBgn0039165.1 826 1275 +
Chr2	stalkie_big_nohaplotig	CDS	153568419	153568490	.	-	0	Parent=FBgn0039165.1.mrna1;Target=FBgn0039165.1 754 825 +
Chr2	stalkie_big_nohaplotig	CDS	153568551	153568945	.	-	2	Parent=FBgn0039165.1.mrna1;Target=FBgn0039165.1 359 753 +
Chr2	stalkie_big_nohaplotig	CDS	153569012	153569230	.	-	2	Parent=FBgn0039165.1.mrna1;Target=FBgn0039165.1 140 358 +
Chr2	stalkie_big_nohaplotig	CDS	153569285	153569423	.	-	0	Parent=FBgn0039165.1.mrna1;Target=FBgn0039165.1 1 139 +
Chr2	gffcl	locus	153571888	153572814	.	+	.	ID=RLOC_00022893;geneIDs=FBgn0037567.1.path1;transcripts=FBgn0037567.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153571888	153572814	.	+	.	ID=FBgn0037567.1.mrna1;geneID=FBgn0037567.1.path1;Name=FBgn0037567.1;Dir=sensecoverage=100.0;identity=98.5;matches=779;mismatches=11;indels=1;unknowns=13;Target=FBgn0037567.1 3 44 +;locus=RLOC_00022893
Chr2	stalkie_big_nohaplotig	exon	153571888	153571964	98	+	.	Parent=FBgn0037567.1.mrna1;Target=FBgn0037567.1 1 78 +
Chr2	stalkie_big_nohaplotig	exon	153572025	153572543	98	+	.	Parent=FBgn0037567.1.mrna1;Target=FBgn0037567.1 79 597 +
Chr2	stalkie_big_nohaplotig	exon	153572608	153572814	97	+	.	Parent=FBgn0037567.1.mrna1;Target=FBgn0037567.1 598 804 +
Chr2	stalkie_big_nohaplotig	CDS	153571890	153571930	.	+	0	Parent=FBgn0037567.1.mrna1
Chr2	gffcl	locus	153573827	153575010	.	-	.	ID=RLOC_00022894;geneIDs=FBgn0037566.1.path1;transcripts=FBgn0037566.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153573827	153575010	.	-	.	ID=FBgn0037566.1.mrna1;geneID=FBgn0037566.1.path1;Name=FBgn0037566.1;Dir=sensecoverage=100.0;identity=99.2;matches=1065;mismatches=9;indels=0;unknowns=0;locus=RLOC_00022894
Chr2	stalkie_big_nohaplotig	exon	153573827	153574390	99	-	.	Parent=FBgn0037566.1.mrna1;Target=FBgn0037566.1 511 1074 +
Chr2	stalkie_big_nohaplotig	exon	153574447	153574756	99	-	.	Parent=FBgn0037566.1.mrna1;Target=FBgn0037566.1 201 510 +
Chr2	stalkie_big_nohaplotig	exon	153574811	153575010	99	-	.	Parent=FBgn0037566.1.mrna1;Target=FBgn0037566.1 1 200 +
Chr2	stalkie_big_nohaplotig	CDS	153573827	153574390	.	-	0	Parent=FBgn0037566.1.mrna1;Target=FBgn0037566.1 511 1074 +
Chr2	stalkie_big_nohaplotig	CDS	153574447	153574756	.	-	1	Parent=FBgn0037566.1.mrna1;Target=FBgn0037566.1 201 510 +
Chr2	stalkie_big_nohaplotig	CDS	153574811	153575010	.	-	0	Parent=FBgn0037566.1.mrna1;Target=FBgn0037566.1 1 200 +
Chr2	gffcl	locus	153582248	153589587	.	+	.	ID=RLOC_00022895;geneIDs=FBgn0037565.1.path1;transcripts=FBgn0037565.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153582248	153589587	.	+	.	ID=FBgn0037565.1.mrna1;geneID=FBgn0037565.1.path1;Name=FBgn0037565.1;Dir=sensecoverage=100.0;identity=99.4;matches=5151;mismatches=33;indels=0;unknowns=0;locus=RLOC_00022895
Chr2	stalkie_big_nohaplotig	exon	153582248	153582805	99	+	.	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 1 558 +
Chr2	stalkie_big_nohaplotig	exon	153582859	153582989	100	+	.	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 559 689 +
Chr2	stalkie_big_nohaplotig	exon	153583915	153584157	99	+	.	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 690 932 +
Chr2	stalkie_big_nohaplotig	exon	153584459	153584622	99	+	.	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 933 1096 +
Chr2	stalkie_big_nohaplotig	exon	153584683	153584978	100	+	.	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 1097 1392 +
Chr2	stalkie_big_nohaplotig	exon	153585036	153585192	98	+	.	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 1393 1549 +
Chr2	stalkie_big_nohaplotig	exon	153585269	153585451	99	+	.	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 1550 1732 +
Chr2	stalkie_big_nohaplotig	exon	153585512	153585823	99	+	.	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 1733 2044 +
Chr2	stalkie_big_nohaplotig	exon	153586133	153586298	99	+	.	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 2045 2210 +
Chr2	stalkie_big_nohaplotig	exon	153586358	153586584	100	+	.	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 2211 2437 +
Chr2	stalkie_big_nohaplotig	exon	153586640	153586961	99	+	.	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 2438 2759 +
Chr2	stalkie_big_nohaplotig	exon	153587050	153587311	98	+	.	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 2760 3021 +
Chr2	stalkie_big_nohaplotig	exon	153587368	153587488	100	+	.	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 3022 3142 +
Chr2	stalkie_big_nohaplotig	exon	153587546	153589587	99	+	.	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 3143 5184 +
Chr2	stalkie_big_nohaplotig	CDS	153582248	153582805	.	+	0	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 1 558 +
Chr2	stalkie_big_nohaplotig	CDS	153582859	153582989	.	+	0	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 559 689 +
Chr2	stalkie_big_nohaplotig	CDS	153583915	153584157	.	+	1	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 690 932 +
Chr2	stalkie_big_nohaplotig	CDS	153584459	153584622	.	+	1	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 933 1096 +
Chr2	stalkie_big_nohaplotig	CDS	153584683	153584978	.	+	2	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 1097 1392 +
Chr2	stalkie_big_nohaplotig	CDS	153585036	153585192	.	+	0	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 1393 1549 +
Chr2	stalkie_big_nohaplotig	CDS	153585269	153585451	.	+	2	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 1550 1732 +
Chr2	stalkie_big_nohaplotig	CDS	153585512	153585823	.	+	2	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 1733 2044 +
Chr2	stalkie_big_nohaplotig	CDS	153586133	153586298	.	+	2	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 2045 2210 +
Chr2	stalkie_big_nohaplotig	CDS	153586358	153586584	.	+	1	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 2211 2437 +
Chr2	stalkie_big_nohaplotig	CDS	153586640	153586961	.	+	2	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 2438 2759 +
Chr2	stalkie_big_nohaplotig	CDS	153587050	153587311	.	+	1	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 2760 3021 +
Chr2	stalkie_big_nohaplotig	CDS	153587368	153587488	.	+	0	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 3022 3142 +
Chr2	stalkie_big_nohaplotig	CDS	153587546	153589587	.	+	2	Parent=FBgn0037565.1.mrna1;Target=FBgn0037565.1 3143 5184 +
Chr2	gffcl	locus	153608277	153609293	.	-	.	ID=RLOC_00022896;geneIDs=FBgn0010433.1.path1;transcripts=FBgn0010433.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153608277	153609293	.	-	.	ID=FBgn0010433.1.mrna1;geneID=FBgn0010433.1.path1;Name=FBgn0010433.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1013;mismatches=4;indels=0;unknowns=0;Target=FBgn0010433.1 1017 1 .;locus=RLOC_00022896
Chr2	stalkie_big_nohaplotig	exon	153608277	153609293	99	-	.	Parent=FBgn0010433.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153608277	153609293	.	-	0	Parent=FBgn0010433.1.mrna1
Chr2	gffcl	locus	153633268	153635416	.	+	.	ID=RLOC_00022897;geneIDs=FBgn0039175.1.path1;transcripts=FBgn0039175.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153633268	153635416	.	+	.	ID=FBgn0039175.1.mrna1;geneID=FBgn0039175.1.path1;Name=FBgn0039175.1;Dir=sensecoverage=100.0;identity=99.7;matches=1908;mismatches=6;indels=0;unknowns=0;locus=RLOC_00022897
Chr2	stalkie_big_nohaplotig	exon	153633268	153633469	97	+	.	Parent=FBgn0039175.1.mrna1;Target=FBgn0039175.1 1 202 +
Chr2	stalkie_big_nohaplotig	exon	153633527	153633582	100	+	.	Parent=FBgn0039175.1.mrna1;Target=FBgn0039175.1 203 258 +
Chr2	stalkie_big_nohaplotig	exon	153633647	153633804	100	+	.	Parent=FBgn0039175.1.mrna1;Target=FBgn0039175.1 259 416 +
Chr2	stalkie_big_nohaplotig	exon	153633864	153635212	99	+	.	Parent=FBgn0039175.1.mrna1;Target=FBgn0039175.1 417 1765 +
Chr2	stalkie_big_nohaplotig	exon	153635268	153635416	100	+	.	Parent=FBgn0039175.1.mrna1;Target=FBgn0039175.1 1766 1914 +
Chr2	stalkie_big_nohaplotig	CDS	153633268	153633469	.	+	0	Parent=FBgn0039175.1.mrna1;Target=FBgn0039175.1 1 202 +
Chr2	stalkie_big_nohaplotig	CDS	153633527	153633582	.	+	2	Parent=FBgn0039175.1.mrna1;Target=FBgn0039175.1 203 258 +
Chr2	stalkie_big_nohaplotig	CDS	153633647	153633804	.	+	0	Parent=FBgn0039175.1.mrna1;Target=FBgn0039175.1 259 416 +
Chr2	stalkie_big_nohaplotig	CDS	153633864	153635212	.	+	1	Parent=FBgn0039175.1.mrna1;Target=FBgn0039175.1 417 1765 +
Chr2	stalkie_big_nohaplotig	CDS	153635268	153635416	.	+	2	Parent=FBgn0039175.1.mrna1;Target=FBgn0039175.1 1766 1914 +
Chr2	gffcl	locus	153637638	153637925	.	-	.	ID=RLOC_00022898;geneIDs=comp116316_c0_seq1.path1;transcripts=comp116316_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153637638	153637925	.	-	.	ID=comp116316_c0_seq1.mrna1;geneID=comp116316_c0_seq1.path1;Name=comp116316_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=285;mismatches=1;indels=2;unknowns=0;Target=comp116316_c0_seq1 286 1 .;CDS_Target=comp116316_c0_seq1 53 3 .;locus=RLOC_00022898
Chr2	stalkie_big_nohaplotig	exon	153637638	153637925	98	-	.	Parent=comp116316_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153637872	153637923	.	-	0	Parent=comp116316_c0_seq1.mrna1
Chr2	gffcl	locus	153667476	153669431	.	-	.	ID=RLOC_00022899;geneIDs=FBgn0020510.1.path1;transcripts=FBgn0020510.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153667476	153669431	.	-	.	ID=FBgn0020510.1.mrna1;geneID=FBgn0020510.1.path1;Name=FBgn0020510.1;Dir=sensecoverage=100.0;identity=99.6;matches=1399;mismatches=5;indels=0;unknowns=0;locus=RLOC_00022899
Chr2	stalkie_big_nohaplotig	exon	153667476	153667636	99	-	.	Parent=FBgn0020510.1.mrna1;Target=FBgn0020510.1 1244 1404 +
Chr2	stalkie_big_nohaplotig	exon	153667698	153667888	100	-	.	Parent=FBgn0020510.1.mrna1;Target=FBgn0020510.1 1053 1243 +
Chr2	stalkie_big_nohaplotig	exon	153668035	153668122	98	-	.	Parent=FBgn0020510.1.mrna1;Target=FBgn0020510.1 965 1052 +
Chr2	stalkie_big_nohaplotig	exon	153668337	153668941	100	-	.	Parent=FBgn0020510.1.mrna1;Target=FBgn0020510.1 360 964 +
Chr2	stalkie_big_nohaplotig	exon	153668996	153669199	98	-	.	Parent=FBgn0020510.1.mrna1;Target=FBgn0020510.1 156 359 +
Chr2	stalkie_big_nohaplotig	exon	153669277	153669431	100	-	.	Parent=FBgn0020510.1.mrna1;Target=FBgn0020510.1 1 155 +
Chr2	stalkie_big_nohaplotig	CDS	153667476	153667636	.	-	2	Parent=FBgn0020510.1.mrna1;Target=FBgn0020510.1 1244 1404 +
Chr2	stalkie_big_nohaplotig	CDS	153667698	153667888	.	-	1	Parent=FBgn0020510.1.mrna1;Target=FBgn0020510.1 1053 1243 +
Chr2	stalkie_big_nohaplotig	CDS	153668035	153668122	.	-	2	Parent=FBgn0020510.1.mrna1;Target=FBgn0020510.1 965 1052 +
Chr2	stalkie_big_nohaplotig	CDS	153668337	153668941	.	-	1	Parent=FBgn0020510.1.mrna1;Target=FBgn0020510.1 360 964 +
Chr2	stalkie_big_nohaplotig	CDS	153668996	153669199	.	-	1	Parent=FBgn0020510.1.mrna1;Target=FBgn0020510.1 156 359 +
Chr2	stalkie_big_nohaplotig	CDS	153669277	153669431	.	-	0	Parent=FBgn0020510.1.mrna1;Target=FBgn0020510.1 1 155 +
Chr2	gffcl	locus	153671272	153672628	.	-	.	ID=RLOC_00022900;geneIDs=FBgn0037756.1.path1;transcripts=FBgn0037756.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153671272	153672628	.	-	.	ID=FBgn0037756.1.mrna1;geneID=FBgn0037756.1.path1;Name=FBgn0037756.1;Dir=sensecoverage=100.0;identity=99.7;matches=1119;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022900
Chr2	stalkie_big_nohaplotig	exon	153671272	153671397	100	-	.	Parent=FBgn0037756.1.mrna1;Target=FBgn0037756.1 997 1122 +
Chr2	stalkie_big_nohaplotig	exon	153671451	153671812	100	-	.	Parent=FBgn0037756.1.mrna1;Target=FBgn0037756.1 635 996 +
Chr2	stalkie_big_nohaplotig	exon	153671873	153672083	99	-	.	Parent=FBgn0037756.1.mrna1;Target=FBgn0037756.1 424 634 +
Chr2	stalkie_big_nohaplotig	exon	153672144	153672359	100	-	.	Parent=FBgn0037756.1.mrna1;Target=FBgn0037756.1 208 423 +
Chr2	stalkie_big_nohaplotig	exon	153672422	153672628	99	-	.	Parent=FBgn0037756.1.mrna1;Target=FBgn0037756.1 1 207 +
Chr2	stalkie_big_nohaplotig	CDS	153671272	153671397	.	-	0	Parent=FBgn0037756.1.mrna1;Target=FBgn0037756.1 997 1122 +
Chr2	stalkie_big_nohaplotig	CDS	153671451	153671812	.	-	2	Parent=FBgn0037756.1.mrna1;Target=FBgn0037756.1 635 996 +
Chr2	stalkie_big_nohaplotig	CDS	153671873	153672083	.	-	0	Parent=FBgn0037756.1.mrna1;Target=FBgn0037756.1 424 634 +
Chr2	stalkie_big_nohaplotig	CDS	153672144	153672359	.	-	0	Parent=FBgn0037756.1.mrna1;Target=FBgn0037756.1 208 423 +
Chr2	stalkie_big_nohaplotig	CDS	153672422	153672628	.	-	0	Parent=FBgn0037756.1.mrna1;Target=FBgn0037756.1 1 207 +
Chr2	gffcl	locus	153732841	153734886	.	+	.	ID=RLOC_00022902;geneIDs=comp116423_c0_seq1.path1;transcripts=comp116423_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153732841	153734886	.	+	.	ID=comp116423_c0_seq1.mrna1;geneID=comp116423_c0_seq1.path1;Name=comp116423_c0_seq1;Dir=sensecoverage=92.6;identity=99.0;matches=624;mismatches=6;indels=0;unknowns=0;locus=RLOC_00022902
Chr2	stalkie_big_nohaplotig	exon	153732841	153732876	97	+	.	Parent=comp116423_c0_seq1.mrna1;Target=comp116423_c0_seq1 51 86 +
Chr2	stalkie_big_nohaplotig	exon	153732946	153733046	100	+	.	Parent=comp116423_c0_seq1.mrna1;Target=comp116423_c0_seq1 87 187 +
Chr2	stalkie_big_nohaplotig	exon	153734394	153734886	98	+	.	Parent=comp116423_c0_seq1.mrna1;Target=comp116423_c0_seq1 188 680 +
Chr2	stalkie_big_nohaplotig	CDS	153732843	153732876	.	+	0	Parent=comp116423_c0_seq1.mrna1;Target=comp116423_c0_seq1 53 86 +
Chr2	stalkie_big_nohaplotig	CDS	153732946	153733046	.	+	2	Parent=comp116423_c0_seq1.mrna1;Target=comp116423_c0_seq1 87 187 +
Chr2	stalkie_big_nohaplotig	CDS	153734394	153734768	.	+	0	Parent=comp116423_c0_seq1.mrna1;Target=comp116423_c0_seq1 188 562 +
Chr2	gffcl	locus	153735562	153745722	.	-	.	ID=RLOC_00022903;geneIDs=FBgn0038198.1.path1;transcripts=FBgn0038198.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153735562	153745722	.	-	.	ID=FBgn0038198.1.mrna1;geneID=FBgn0038198.1.path1;Name=FBgn0038198.1;Dir=sensecoverage=100.0;identity=99.8;matches=503;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022903
Chr2	stalkie_big_nohaplotig	exon	153735562	153735953	100	-	.	Parent=FBgn0038198.1.mrna1;Target=FBgn0038198.1 113 504 +
Chr2	stalkie_big_nohaplotig	exon	153736011	153736108	98	-	.	Parent=FBgn0038198.1.mrna1;Target=FBgn0038198.1 15 112 +
Chr2	stalkie_big_nohaplotig	exon	153745709	153745722	100	-	.	Parent=FBgn0038198.1.mrna1;Target=FBgn0038198.1 1 14 +
Chr2	stalkie_big_nohaplotig	CDS	153735562	153735953	.	-	2	Parent=FBgn0038198.1.mrna1;Target=FBgn0038198.1 113 504 +
Chr2	stalkie_big_nohaplotig	CDS	153736011	153736108	.	-	1	Parent=FBgn0038198.1.mrna1;Target=FBgn0038198.1 15 112 +
Chr2	stalkie_big_nohaplotig	CDS	153745709	153745722	.	-	0	Parent=FBgn0038198.1.mrna1;Target=FBgn0038198.1 1 14 +
Chr2	gffcl	locus	153740001	153740800	.	+	.	ID=RLOC_00022904;geneIDs=comp150622_c0_seq1.path1;transcripts=comp150622_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153740001	153740800	.	+	.	ID=comp150622_c0_seq1.mrna1;geneID=comp150622_c0_seq1.path1;Name=comp150622_c0_seq1;Dir=indeterminatecoverage=96.5;identity=93.6;matches=751;mismatches=13;indels=38;unknowns=0;Target=comp150622_c0_seq1 794 29 .;CDS_Target=comp150622_c0_seq1 722 660 .;locus=RLOC_00022904
Chr2	stalkie_big_nohaplotig	exon	153740001	153740800	93	+	.	Parent=comp150622_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153740631	153740728	.	+	0	Parent=comp150622_c0_seq1.mrna1
Chr2	gffcl	locus	153750054	153751321	.	-	.	ID=RLOC_00022905;geneIDs=comp148116_c0_seq1.path1;transcripts=comp148116_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153750054	153751321	.	-	.	ID=comp148116_c0_seq1.mrna1;geneID=comp148116_c0_seq1.path1;Name=comp148116_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=1071;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022905
Chr2	stalkie_big_nohaplotig	exon	153750054	153750250	100	-	.	Parent=comp148116_c0_seq1.mrna1;Target=comp148116_c0_seq1 879 1075 +
Chr2	stalkie_big_nohaplotig	exon	153750303	153750510	100	-	.	Parent=comp148116_c0_seq1.mrna1;Target=comp148116_c0_seq1 671 878 +
Chr2	stalkie_big_nohaplotig	exon	153750584	153750725	100	-	.	Parent=comp148116_c0_seq1.mrna1;Target=comp148116_c0_seq1 529 670 +
Chr2	stalkie_big_nohaplotig	exon	153750794	153751321	99	-	.	Parent=comp148116_c0_seq1.mrna1;Target=comp148116_c0_seq1 1 528 +
Chr2	stalkie_big_nohaplotig	CDS	153750056	153750250	.	-	0	Parent=comp148116_c0_seq1.mrna1;Target=comp148116_c0_seq1 879 1073 +
Chr2	stalkie_big_nohaplotig	CDS	153750303	153750510	.	-	1	Parent=comp148116_c0_seq1.mrna1;Target=comp148116_c0_seq1 671 878 +
Chr2	stalkie_big_nohaplotig	CDS	153750584	153750725	.	-	2	Parent=comp148116_c0_seq1.mrna1;Target=comp148116_c0_seq1 529 670 +
Chr2	stalkie_big_nohaplotig	CDS	153750794	153751277	.	-	0	Parent=comp148116_c0_seq1.mrna1;Target=comp148116_c0_seq1 45 528 +
Chr2	gffcl	locus	153753996	153820877	.	+	.	ID=RLOC_00022906;geneIDs=FBgn0002921.1.path1,comp153199_c1_seq1.path2,comp178340_c0_seq1.path1;transcripts=FBgn0002921.1.mrna1,comp153199_c1_seq1.mrna2,comp178340_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153753996	153820365	.	+	.	ID=FBgn0002921.1.mrna1;geneID=FBgn0002921.1.path1;Name=FBgn0002921.1;Dir=sensecoverage=100.0;identity=99.9;matches=3155;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022906
Chr2	stalkie_big_nohaplotig	exon	153753996	153754055	100	+	.	Parent=FBgn0002921.1.mrna1;Target=FBgn0002921.1 1 60 +
Chr2	stalkie_big_nohaplotig	exon	153801613	153801693	100	+	.	Parent=FBgn0002921.1.mrna1;Target=FBgn0002921.1 61 141 +
Chr2	stalkie_big_nohaplotig	exon	153804150	153804281	100	+	.	Parent=FBgn0002921.1.mrna1;Target=FBgn0002921.1 142 273 +
Chr2	stalkie_big_nohaplotig	exon	153804349	153804615	100	+	.	Parent=FBgn0002921.1.mrna1;Target=FBgn0002921.1 274 540 +
Chr2	stalkie_big_nohaplotig	exon	153804685	153806466	99	+	.	Parent=FBgn0002921.1.mrna1;Target=FBgn0002921.1 541 2322 +
Chr2	stalkie_big_nohaplotig	exon	153806531	153806746	100	+	.	Parent=FBgn0002921.1.mrna1;Target=FBgn0002921.1 2323 2538 +
Chr2	stalkie_big_nohaplotig	exon	153807682	153807776	100	+	.	Parent=FBgn0002921.1.mrna1;Target=FBgn0002921.1 2539 2633 +
Chr2	stalkie_big_nohaplotig	exon	153818116	153818290	100	+	.	Parent=FBgn0002921.1.mrna1;Target=FBgn0002921.1 2634 2808 +
Chr2	stalkie_big_nohaplotig	exon	153818357	153818589	100	+	.	Parent=FBgn0002921.1.mrna1;Target=FBgn0002921.1 2809 3041 +
Chr2	stalkie_big_nohaplotig	exon	153820248	153820365	100	+	.	Parent=FBgn0002921.1.mrna1;Target=FBgn0002921.1 3042 3159 +
Chr2	stalkie_big_nohaplotig	CDS	153753996	153754055	.	+	0	Parent=FBgn0002921.1.mrna1;Target=FBgn0002921.1 1 60 +
Chr2	stalkie_big_nohaplotig	CDS	153801613	153801693	.	+	0	Parent=FBgn0002921.1.mrna1;Target=FBgn0002921.1 61 141 +
Chr2	stalkie_big_nohaplotig	CDS	153804150	153804281	.	+	0	Parent=FBgn0002921.1.mrna1;Target=FBgn0002921.1 142 273 +
Chr2	stalkie_big_nohaplotig	CDS	153804349	153804615	.	+	0	Parent=FBgn0002921.1.mrna1;Target=FBgn0002921.1 274 540 +
Chr2	stalkie_big_nohaplotig	CDS	153804685	153806466	.	+	0	Parent=FBgn0002921.1.mrna1;Target=FBgn0002921.1 541 2322 +
Chr2	stalkie_big_nohaplotig	CDS	153806531	153806746	.	+	0	Parent=FBgn0002921.1.mrna1;Target=FBgn0002921.1 2323 2538 +
Chr2	stalkie_big_nohaplotig	CDS	153807682	153807776	.	+	0	Parent=FBgn0002921.1.mrna1;Target=FBgn0002921.1 2539 2633 +
Chr2	stalkie_big_nohaplotig	CDS	153818116	153818290	.	+	1	Parent=FBgn0002921.1.mrna1;Target=FBgn0002921.1 2634 2808 +
Chr2	stalkie_big_nohaplotig	CDS	153818357	153818589	.	+	0	Parent=FBgn0002921.1.mrna1;Target=FBgn0002921.1 2809 3041 +
Chr2	stalkie_big_nohaplotig	CDS	153820248	153820365	.	+	1	Parent=FBgn0002921.1.mrna1;Target=FBgn0002921.1 3042 3159 +
Chr2	stalkie_big_nohaplotig	mRNA	153782104	153820877	.	+	.	ID=comp153199_c1_seq1.mrna2;geneID=comp153199_c1_seq1.path2;Name=comp153199_c1_seq1;Dir=antisensecoverage=94.6;identity=99.7;matches=4112;mismatches=11;indels=3;unknowns=0;locus=RLOC_00022906
Chr2	stalkie_big_nohaplotig	exon	153782104	153782528	100	+	.	Parent=comp153199_c1_seq1.mrna2;Target=comp153199_c1_seq1 3934 4358 -
Chr2	stalkie_big_nohaplotig	exon	153784453	153784542	98	+	.	Parent=comp153199_c1_seq1.mrna2;Target=comp153199_c1_seq1 3844 3933 -
Chr2	stalkie_big_nohaplotig	exon	153801613	153801693	100	+	.	Parent=comp153199_c1_seq1.mrna2;Target=comp153199_c1_seq1 3763 3843 -
Chr2	stalkie_big_nohaplotig	exon	153804150	153804281	100	+	.	Parent=comp153199_c1_seq1.mrna2;Target=comp153199_c1_seq1 3631 3762 -
Chr2	stalkie_big_nohaplotig	exon	153804349	153804615	100	+	.	Parent=comp153199_c1_seq1.mrna2;Target=comp153199_c1_seq1 3364 3630 -
Chr2	stalkie_big_nohaplotig	exon	153804685	153806466	99	+	.	Parent=comp153199_c1_seq1.mrna2;Target=comp153199_c1_seq1 1582 3363 -
Chr2	stalkie_big_nohaplotig	exon	153806531	153806746	100	+	.	Parent=comp153199_c1_seq1.mrna2;Target=comp153199_c1_seq1 1366 1581 -
Chr2	stalkie_big_nohaplotig	exon	153807682	153807776	100	+	.	Parent=comp153199_c1_seq1.mrna2;Target=comp153199_c1_seq1 1271 1365 -
Chr2	stalkie_big_nohaplotig	exon	153818116	153818290	100	+	.	Parent=comp153199_c1_seq1.mrna2;Target=comp153199_c1_seq1 1096 1270 -
Chr2	stalkie_big_nohaplotig	exon	153818357	153818589	100	+	.	Parent=comp153199_c1_seq1.mrna2;Target=comp153199_c1_seq1 863 1095 -
Chr2	stalkie_big_nohaplotig	exon	153820248	153820877	98	+	.	Parent=comp153199_c1_seq1.mrna2;Target=comp153199_c1_seq1 236 862 -
Chr2	stalkie_big_nohaplotig	CDS	153806283	153806466	.	+	2	Parent=comp153199_c1_seq1.mrna2;Target=comp153199_c1_seq1 1582 1765 .
Chr2	stalkie_big_nohaplotig	CDS	153806531	153806745	.	+	1	Parent=comp153199_c1_seq1.mrna2;Target=comp153199_c1_seq1 1367 1581 .
Chr2	stalkie_big_nohaplotig	mRNA	153796995	153804173	.	+	.	ID=comp178340_c0_seq1.mrna1;geneID=comp178340_c0_seq1.path1;Name=comp178340_c0_seq1;Dir=sensecoverage=95.1;identity=99.3;matches=428;mismatches=1;indels=2;unknowns=0;Target=comp178340_c0_seq1 23 121 +;locus=RLOC_00022906
Chr2	stalkie_big_nohaplotig	exon	153796995	153797401	99	+	.	Parent=comp178340_c0_seq1.mrna1;Target=comp178340_c0_seq1 23 427 +
Chr2	stalkie_big_nohaplotig	exon	153804150	153804173	100	+	.	Parent=comp178340_c0_seq1.mrna1;Target=comp178340_c0_seq1 428 451 +
Chr2	stalkie_big_nohaplotig	CDS	153796995	153797093	.	+	0	Parent=comp178340_c0_seq1.mrna1
Chr2	gffcl	locus	153779471	153780356	.	-	.	ID=RLOC_00022907;geneIDs=comp143447_c0_seq1.path1;transcripts=comp143447_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153779471	153780356	.	-	.	ID=comp143447_c0_seq1.mrna1;geneID=comp143447_c0_seq1.path1;Name=comp143447_c0_seq1;Dir=antisensecoverage=99.7;identity=98.8;matches=748;mismatches=5;indels=4;unknowns=0;Target=comp143447_c0_seq1 83 166 .;locus=RLOC_00022907
Chr2	stalkie_big_nohaplotig	exon	153779471	153779680	99	-	.	Parent=comp143447_c0_seq1.mrna1;Target=comp143447_c0_seq1 1 210 -
Chr2	stalkie_big_nohaplotig	exon	153779813	153780356	98	-	.	Parent=comp143447_c0_seq1.mrna1;Target=comp143447_c0_seq1 211 756 -
Chr2	stalkie_big_nohaplotig	CDS	153779553	153779636	.	-	0	Parent=comp143447_c0_seq1.mrna1
Chr2	gffcl	locus	153813691	153814818	.	-	.	ID=RLOC_00022908;geneIDs=comp155239_c1_seq1.path1;transcripts=comp155239_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153813691	153814818	.	-	.	ID=comp155239_c1_seq1.mrna1;geneID=comp155239_c1_seq1.path1;Name=comp155239_c1_seq1;Dir=antisensecoverage=97.9;identity=99.8;matches=931;mismatches=2;indels=0;unknowns=0;Target=comp155239_c1_seq1 234 302 .;locus=RLOC_00022908
Chr2	stalkie_big_nohaplotig	exon	153813691	153814053	100	-	.	Parent=comp155239_c1_seq1.mrna1;Target=comp155239_c1_seq1 21 383 -
Chr2	stalkie_big_nohaplotig	exon	153814249	153814818	99	-	.	Parent=comp155239_c1_seq1.mrna1;Target=comp155239_c1_seq1 384 953 -
Chr2	stalkie_big_nohaplotig	CDS	153813904	153813972	.	-	0	Parent=comp155239_c1_seq1.mrna1
Chr2	gffcl	locus	153815383	153817096	.	-	.	ID=RLOC_00022909;geneIDs=comp157333_c0_seq1.path1;transcripts=comp157333_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153815383	153817096	.	-	.	ID=comp157333_c0_seq1.mrna1;geneID=comp157333_c0_seq1.path1;Name=comp157333_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1706;mismatches=8;indels=5;unknowns=0;Target=comp157333_c0_seq1 1719 1 .;CDS_Target=comp157333_c0_seq1 1719 1552 .;locus=RLOC_00022909
Chr2	stalkie_big_nohaplotig	exon	153815383	153817096	99	-	.	Parent=comp157333_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153815383	153815550	.	-	0	Parent=comp157333_c0_seq1.mrna1
Chr2	gffcl	locus	153820881	153823115	.	.	.	ID=RLOC_00022910;geneIDs=comp146836_c0_seq1.path1,comp167191_c0_seq1.path1;transcripts=comp146836_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153821453	153823115	.	+	.	ID=comp146836_c0_seq1.mrna1;geneID=comp146836_c0_seq1.path1;Name=comp146836_c0_seq1;Dir=indeterminatecoverage=99.5;identity=98.2;matches=1653;mismatches=7;indels=23;unknowns=0;Target=comp146836_c0_seq1 1680 1 .;CDS_Target=comp146836_c0_seq1 940 827 .;locus=RLOC_00022910
Chr2	stalkie_big_nohaplotig	exon	153821453	153823115	98	+	.	Parent=comp146836_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153822282	153822395	.	+	0	Parent=comp146836_c0_seq1.mrna1
Chr2	gffcl	locus	153828125	153831953	.	+	.	ID=RLOC_00022911;geneIDs=FBgn0002921.2.path1;transcripts=FBgn0002921.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153828125	153831953	.	+	.	ID=FBgn0002921.2.mrna1;geneID=FBgn0002921.2.path1;Name=FBgn0002921.2;Dir=sensecoverage=100.0;identity=99.5;matches=2997;mismatches=15;indels=0;unknowns=0;locus=RLOC_00022911
Chr2	stalkie_big_nohaplotig	exon	153828125	153828250	100	+	.	Parent=FBgn0002921.2.mrna1;Target=FBgn0002921.2 1 126 +
Chr2	stalkie_big_nohaplotig	exon	153828326	153828601	98	+	.	Parent=FBgn0002921.2.mrna1;Target=FBgn0002921.2 127 402 +
Chr2	stalkie_big_nohaplotig	exon	153828681	153830453	99	+	.	Parent=FBgn0002921.2.mrna1;Target=FBgn0002921.2 403 2175 +
Chr2	stalkie_big_nohaplotig	exon	153830516	153830731	100	+	.	Parent=FBgn0002921.2.mrna1;Target=FBgn0002921.2 2176 2391 +
Chr2	stalkie_big_nohaplotig	exon	153830794	153830888	100	+	.	Parent=FBgn0002921.2.mrna1;Target=FBgn0002921.2 2392 2486 +
Chr2	stalkie_big_nohaplotig	exon	153831306	153831480	100	+	.	Parent=FBgn0002921.2.mrna1;Target=FBgn0002921.2 2487 2661 +
Chr2	stalkie_big_nohaplotig	exon	153831530	153831762	100	+	.	Parent=FBgn0002921.2.mrna1;Target=FBgn0002921.2 2662 2894 +
Chr2	stalkie_big_nohaplotig	exon	153831836	153831953	99	+	.	Parent=FBgn0002921.2.mrna1;Target=FBgn0002921.2 2895 3012 +
Chr2	stalkie_big_nohaplotig	CDS	153828125	153828250	.	+	0	Parent=FBgn0002921.2.mrna1;Target=FBgn0002921.2 1 126 +
Chr2	stalkie_big_nohaplotig	CDS	153828326	153828601	.	+	0	Parent=FBgn0002921.2.mrna1;Target=FBgn0002921.2 127 402 +
Chr2	stalkie_big_nohaplotig	CDS	153828681	153830453	.	+	0	Parent=FBgn0002921.2.mrna1;Target=FBgn0002921.2 403 2175 +
Chr2	stalkie_big_nohaplotig	CDS	153830516	153830731	.	+	0	Parent=FBgn0002921.2.mrna1;Target=FBgn0002921.2 2176 2391 +
Chr2	stalkie_big_nohaplotig	CDS	153830794	153830888	.	+	0	Parent=FBgn0002921.2.mrna1;Target=FBgn0002921.2 2392 2486 +
Chr2	stalkie_big_nohaplotig	CDS	153831306	153831480	.	+	1	Parent=FBgn0002921.2.mrna1;Target=FBgn0002921.2 2487 2661 +
Chr2	stalkie_big_nohaplotig	CDS	153831530	153831762	.	+	0	Parent=FBgn0002921.2.mrna1;Target=FBgn0002921.2 2662 2894 +
Chr2	stalkie_big_nohaplotig	CDS	153831836	153831953	.	+	1	Parent=FBgn0002921.2.mrna1;Target=FBgn0002921.2 2895 3012 +
Chr2	stalkie_big_nohaplotig	mRNA	153855904	153865372	.	+	.	ID=comp144997_c0_seq1.mrna1;geneID=comp144997_c0_seq1.path1;Name=comp144997_c0_seq1;Dir=antisensecoverage=100.0;identity=99.8;matches=833;mismatches=1;indels=1;unknowns=0;Target=comp144997_c0_seq1 632 742 .;locus=RLOC_00022912
Chr2	stalkie_big_nohaplotig	exon	153855904	153856720	99	+	.	Parent=comp144997_c0_seq1.mrna1;Target=comp144997_c0_seq1 18 835 -
Chr2	stalkie_big_nohaplotig	exon	153865356	153865372	100	+	.	Parent=comp144997_c0_seq1.mrna1;Target=comp144997_c0_seq1 1 17 -
Chr2	stalkie_big_nohaplotig	CDS	153855997	153856107	.	+	0	Parent=comp144997_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153900427	153901199	.	-	.	ID=comp105283_c0_seq1.mrna1;geneID=comp105283_c0_seq1.path1;Name=comp105283_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=769;mismatches=0;indels=5;unknowns=0;Target=comp105283_c0_seq1 770 1 .;CDS_Target=comp105283_c0_seq1 591 481 .;locus=RLOC_00022912
Chr2	stalkie_big_nohaplotig	exon	153900427	153901199	99	-	.	Parent=comp105283_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153900606	153900716	.	-	0	Parent=comp105283_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153918298	153918639	.	-	.	ID=comp61866_c0_seq1.mrna1;geneID=comp61866_c0_seq1.path1;Name=comp61866_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=341;mismatches=1;indels=0;unknowns=0;Target=comp61866_c0_seq1 342 1 .;CDS_Target=comp61866_c0_seq1 56 3 .;locus=RLOC_00022912
Chr2	stalkie_big_nohaplotig	exon	153918298	153918639	99	-	.	Parent=comp61866_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153918584	153918637	.	-	0	Parent=comp61866_c0_seq1.mrna1
Chr2	gffcl	locus	153901439	153902126	.	+	.	ID=RLOC_00022913;geneIDs=comp140555_c0_seq1.path1;transcripts=comp140555_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153901439	153902126	.	+	.	ID=comp140555_c0_seq1.mrna1;geneID=comp140555_c0_seq1.path1;Name=comp140555_c0_seq1;Dir=indeterminatecoverage=97.9;identity=99.6;matches=685;mismatches=3;indels=0;unknowns=0;Target=comp140555_c0_seq1 703 16 .;CDS_Target=comp140555_c0_seq1 53 18 .;locus=RLOC_00022913
Chr2	stalkie_big_nohaplotig	exon	153901439	153902126	99	+	.	Parent=comp140555_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153901441	153901476	.	+	0	Parent=comp140555_c0_seq1.mrna1
Chr2	gffcl	locus	153902200	153902873	.	+	.	ID=RLOC_00022914;geneIDs=comp136552_c0_seq1.path1;transcripts=comp136552_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153902200	153902873	.	+	.	ID=comp136552_c0_seq1.mrna1;geneID=comp136552_c0_seq1.path1;Name=comp136552_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=653;mismatches=21;indels=0;unknowns=0;Target=comp136552_c0_seq1 674 1 .;CDS_Target=comp136552_c0_seq1 515 450 .;locus=RLOC_00022914
Chr2	stalkie_big_nohaplotig	exon	153902200	153902873	96	+	.	Parent=comp136552_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153902649	153902714	.	+	0	Parent=comp136552_c0_seq1.mrna1
Chr2	gffcl	locus	153904898	153905730	.	+	.	ID=RLOC_00022915;geneIDs=comp153259_c0_seq1.path1;transcripts=comp153259_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153904898	153905730	.	+	.	ID=comp153259_c0_seq1.mrna1;geneID=comp153259_c0_seq1.path1;Name=comp153259_c0_seq1;Dir=indeterminatecoverage=98.6;identity=96.0;matches=800;mismatches=27;indels=6;unknowns=0;Target=comp153259_c0_seq1 839 13 .;CDS_Target=comp153259_c0_seq1 126 13 .;locus=RLOC_00022915
Chr2	stalkie_big_nohaplotig	exon	153904898	153905730	96	+	.	Parent=comp153259_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153904898	153905011	.	+	0	Parent=comp153259_c0_seq1.mrna1
Chr2	gffcl	locus	153905918	153906714	.	-	.	ID=RLOC_00022916;geneIDs=comp152169_c0_seq1.path1;transcripts=comp152169_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153905918	153906714	.	-	.	ID=comp152169_c0_seq1.mrna1;geneID=comp152169_c0_seq1.path1;Name=comp152169_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=786;mismatches=11;indels=0;unknowns=0;Target=comp152169_c0_seq1 797 1 .;CDS_Target=comp152169_c0_seq1 553 497 .;locus=RLOC_00022916
Chr2	stalkie_big_nohaplotig	exon	153905918	153906714	98	-	.	Parent=comp152169_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153906162	153906218	.	-	0	Parent=comp152169_c0_seq1.mrna1
Chr2	gffcl	locus	153906974	153907640	.	+	.	ID=RLOC_00022917;geneIDs=comp123218_c0_seq1.path1;transcripts=comp123218_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153906974	153907640	.	+	.	ID=comp123218_c0_seq1.mrna1;geneID=comp123218_c0_seq1.path1;Name=comp123218_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=665;mismatches=2;indels=0;unknowns=0;Target=comp123218_c0_seq1 667 1 .;CDS_Target=comp123218_c0_seq1 311 186 .;locus=RLOC_00022917
Chr2	stalkie_big_nohaplotig	exon	153906974	153907640	99	+	.	Parent=comp123218_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153907159	153907284	.	+	0	Parent=comp123218_c0_seq1.mrna1
Chr2	gffcl	locus	153907643	153908186	.	-	.	ID=RLOC_00022918;geneIDs=comp150239_c0_seq1.path1;transcripts=comp150239_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153907643	153908186	.	-	.	ID=comp150239_c0_seq1.mrna1;geneID=comp150239_c0_seq1.path1;Name=comp150239_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.4;matches=541;mismatches=2;indels=1;unknowns=0;Target=comp150239_c0_seq1 546 4 .;CDS_Target=comp150239_c0_seq1 460 287 .;locus=RLOC_00022918
Chr2	stalkie_big_nohaplotig	exon	153907643	153908186	99	-	.	Parent=comp150239_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153907729	153907902	.	-	0	Parent=comp150239_c0_seq1.mrna1
Chr2	gffcl	locus	153909576	153911289	.	+	.	ID=RLOC_00022919;geneIDs=comp157323_c0_seq1.path1;transcripts=comp157323_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153909576	153911289	.	+	.	ID=comp157323_c0_seq1.mrna1;geneID=comp157323_c0_seq1.path1;Name=comp157323_c0_seq1;Dir=indeterminatecoverage=98.3;identity=98.7;matches=1693;mismatches=21;indels=1;unknowns=0;Target=comp157323_c0_seq1 1721 7 .;CDS_Target=comp157323_c0_seq1 1720 1604 .;locus=RLOC_00022919
Chr2	stalkie_big_nohaplotig	exon	153909576	153911289	98	+	.	Parent=comp157323_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153911172	153911288	.	+	0	Parent=comp157323_c0_seq1.mrna1
Chr2	gffcl	locus	153918822	153921006	.	+	.	ID=RLOC_00022920;geneIDs=comp156412_c0_seq1.path1;transcripts=comp156412_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153918822	153921006	.	+	.	ID=comp156412_c0_seq1.mrna1;geneID=comp156412_c0_seq1.path1;Name=comp156412_c0_seq1;Dir=indeterminatecoverage=98.7;identity=96.9;matches=2164;mismatches=20;indels=50;unknowns=0;Target=comp156412_c0_seq1 2243 11 .;CDS_Target=comp156412_c0_seq1 849 718 .;locus=RLOC_00022920
Chr2	stalkie_big_nohaplotig	exon	153918822	153921006	96	+	.	Parent=comp156412_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153919527	153919658	.	+	0	Parent=comp156412_c0_seq1.mrna1
Chr2	gffcl	locus	153923119	153923427	.	+	.	ID=RLOC_00022921;geneIDs=comp113296_c0_seq1.path1;transcripts=comp113296_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153923119	153923427	.	+	.	ID=comp113296_c0_seq1.mrna1;geneID=comp113296_c0_seq1.path1;Name=comp113296_c0_seq1;Dir=indeterminatecoverage=96.3;identity=99.4;matches=307;mismatches=2;indels=0;unknowns=0;Target=comp113296_c0_seq1 321 13 .;CDS_Target=comp113296_c0_seq1 134 15 .;locus=RLOC_00022921
Chr2	stalkie_big_nohaplotig	exon	153923119	153923427	99	+	.	Parent=comp113296_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153923121	153923240	.	+	0	Parent=comp113296_c0_seq1.mrna1
Chr2	gffcl	locus	153924970	153925428	.	+	.	ID=RLOC_00022922;geneIDs=comp296902_c0_seq1.path1;transcripts=comp296902_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153924970	153925428	.	+	.	ID=comp296902_c0_seq1.mrna1;geneID=comp296902_c0_seq1.path1;Name=comp296902_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=456;mismatches=3;indels=0;unknowns=0;Target=comp296902_c0_seq1 459 1 .;CDS_Target=comp296902_c0_seq1 94 2 .;locus=RLOC_00022922
Chr2	stalkie_big_nohaplotig	exon	153924970	153925428	99	+	.	Parent=comp296902_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153924971	153925063	.	+	0	Parent=comp296902_c0_seq1.mrna1
Chr2	gffcl	locus	153928643	153933017	.	-	.	ID=RLOC_00022923;geneIDs=FBgn0263986.1.path1;transcripts=FBgn0263986.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153928643	153933017	.	-	.	ID=FBgn0263986.1.mrna1;geneID=FBgn0263986.1.path1;Name=FBgn0263986.1;Dir=sensecoverage=100.0;identity=99.1;matches=2565;mismatches=23;indels=1;unknowns=0;locus=RLOC_00022923
Chr2	stalkie_big_nohaplotig	exon	153928643	153928932	99	-	.	Parent=FBgn0263986.1.mrna1;Target=FBgn0263986.1 2300 2589 +
Chr2	stalkie_big_nohaplotig	exon	153928993	153929162	98	-	.	Parent=FBgn0263986.1.mrna1;Target=FBgn0263986.1 2130 2299 +
Chr2	stalkie_big_nohaplotig	exon	153929263	153929642	99	-	.	Parent=FBgn0263986.1.mrna1;Target=FBgn0263986.1 1750 2129 +
Chr2	stalkie_big_nohaplotig	exon	153929701	153929863	99	-	.	Parent=FBgn0263986.1.mrna1;Target=FBgn0263986.1 1587 1749 +
Chr2	stalkie_big_nohaplotig	exon	153930059	153930257	99	-	.	Parent=FBgn0263986.1.mrna1;Target=FBgn0263986.1 1388 1586 +
Chr2	stalkie_big_nohaplotig	exon	153930322	153931466	98	-	.	Parent=FBgn0263986.1.mrna1;Target=FBgn0263986.1 243 1387 +
Chr2	stalkie_big_nohaplotig	exon	153932777	153933017	99	-	.	Parent=FBgn0263986.1.mrna1;Target=FBgn0263986.1 1 242 +
Chr2	stalkie_big_nohaplotig	CDS	153928643	153928932	.	-	2	Parent=FBgn0263986.1.mrna1;Target=FBgn0263986.1 2300 2589 +
Chr2	stalkie_big_nohaplotig	CDS	153928993	153929162	.	-	1	Parent=FBgn0263986.1.mrna1;Target=FBgn0263986.1 2130 2299 +
Chr2	stalkie_big_nohaplotig	CDS	153929263	153929642	.	-	0	Parent=FBgn0263986.1.mrna1;Target=FBgn0263986.1 1750 2129 +
Chr2	stalkie_big_nohaplotig	CDS	153929701	153929863	.	-	1	Parent=FBgn0263986.1.mrna1;Target=FBgn0263986.1 1587 1749 +
Chr2	stalkie_big_nohaplotig	CDS	153930059	153930257	.	-	2	Parent=FBgn0263986.1.mrna1;Target=FBgn0263986.1 1388 1586 +
Chr2	stalkie_big_nohaplotig	CDS	153930322	153931466	.	-	1	Parent=FBgn0263986.1.mrna1;Target=FBgn0263986.1 243 1387 +
Chr2	stalkie_big_nohaplotig	CDS	153932777	153932910	.	-	0	Parent=FBgn0263986.1.mrna1;Target=FBgn0263986.1 109 242 +
Chr2	gffcl	locus	153933395	153942696	.	+	.	ID=RLOC_00022924;geneIDs=FBgn0039003.1.path1,comp162895_c0_seq1.path1;transcripts=comp162895_c0_seq1.mrna1,FBgn0039003.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153933395	153942696	.	+	.	ID=comp162895_c0_seq1.mrna1;geneID=comp162895_c0_seq1.path1;Name=comp162895_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=7126;mismatches=19;indels=14;unknowns=0;locus=RLOC_00022924
Chr2	stalkie_big_nohaplotig	exon	153933395	153933648	98	+	.	Parent=comp162895_c0_seq1.mrna1;Target=comp162895_c0_seq1 254 1 .
Chr2	stalkie_big_nohaplotig	exon	153933789	153934005	99	+	.	Parent=comp162895_c0_seq1.mrna1;Target=comp162895_c0_seq1 471 255 .
Chr2	stalkie_big_nohaplotig	exon	153934094	153934282	98	+	.	Parent=comp162895_c0_seq1.mrna1;Target=comp162895_c0_seq1 660 472 .
Chr2	stalkie_big_nohaplotig	exon	153935431	153935783	100	+	.	Parent=comp162895_c0_seq1.mrna1;Target=comp162895_c0_seq1 1013 661 .
Chr2	stalkie_big_nohaplotig	exon	153935846	153936411	99	+	.	Parent=comp162895_c0_seq1.mrna1;Target=comp162895_c0_seq1 1579 1014 .
Chr2	stalkie_big_nohaplotig	exon	153936475	153936593	100	+	.	Parent=comp162895_c0_seq1.mrna1;Target=comp162895_c0_seq1 1698 1580 .
Chr2	stalkie_big_nohaplotig	exon	153936692	153936896	99	+	.	Parent=comp162895_c0_seq1.mrna1;Target=comp162895_c0_seq1 1903 1699 .
Chr2	stalkie_big_nohaplotig	exon	153936963	153937587	100	+	.	Parent=comp162895_c0_seq1.mrna1;Target=comp162895_c0_seq1 2528 1904 .
Chr2	stalkie_big_nohaplotig	exon	153937646	153937762	100	+	.	Parent=comp162895_c0_seq1.mrna1;Target=comp162895_c0_seq1 2645 2529 .
Chr2	stalkie_big_nohaplotig	exon	153937820	153938006	100	+	.	Parent=comp162895_c0_seq1.mrna1;Target=comp162895_c0_seq1 2832 2646 .
Chr2	stalkie_big_nohaplotig	exon	153938062	153938567	100	+	.	Parent=comp162895_c0_seq1.mrna1;Target=comp162895_c0_seq1 3338 2833 .
Chr2	stalkie_big_nohaplotig	exon	153938632	153938795	99	+	.	Parent=comp162895_c0_seq1.mrna1;Target=comp162895_c0_seq1 3502 3339 .
Chr2	stalkie_big_nohaplotig	exon	153938849	153939563	97	+	.	Parent=comp162895_c0_seq1.mrna1;Target=comp162895_c0_seq1 4211 3503 .
Chr2	stalkie_big_nohaplotig	exon	153939629	153939727	100	+	.	Parent=comp162895_c0_seq1.mrna1;Target=comp162895_c0_seq1 4310 4212 .
Chr2	stalkie_big_nohaplotig	exon	153939790	153941411	99	+	.	Parent=comp162895_c0_seq1.mrna1;Target=comp162895_c0_seq1 5932 4311 .
Chr2	stalkie_big_nohaplotig	exon	153941480	153942696	99	+	.	Parent=comp162895_c0_seq1.mrna1;Target=comp162895_c0_seq1 7149 5933 .
Chr2	stalkie_big_nohaplotig	CDS	153939500	153939563	.	+	0	Parent=comp162895_c0_seq1.mrna1;Target=comp162895_c0_seq1 4211 4148 .
Chr2	stalkie_big_nohaplotig	CDS	153939629	153939727	.	+	2	Parent=comp162895_c0_seq1.mrna1;Target=comp162895_c0_seq1 4310 4212 .
Chr2	stalkie_big_nohaplotig	CDS	153939790	153941411	.	+	2	Parent=comp162895_c0_seq1.mrna1;Target=comp162895_c0_seq1 5932 4311 .
Chr2	stalkie_big_nohaplotig	CDS	153941480	153942325	.	+	0	Parent=comp162895_c0_seq1.mrna1;Target=comp162895_c0_seq1 6778 5933 .
Chr2	stalkie_big_nohaplotig	mRNA	153939479	153942503	.	+	.	ID=FBgn0039003.1.mrna1;geneID=FBgn0039003.1.path1;Name=FBgn0039003.1;Dir=sensecoverage=100.0;identity=99.9;matches=2726;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022924
Chr2	stalkie_big_nohaplotig	exon	153939479	153939563	100	+	.	Parent=FBgn0039003.1.mrna1;Target=FBgn0039003.1 1 85 +
Chr2	stalkie_big_nohaplotig	exon	153939629	153939727	100	+	.	Parent=FBgn0039003.1.mrna1;Target=FBgn0039003.1 86 184 +
Chr2	stalkie_big_nohaplotig	exon	153939790	153941411	99	+	.	Parent=FBgn0039003.1.mrna1;Target=FBgn0039003.1 185 1806 +
Chr2	stalkie_big_nohaplotig	exon	153941480	153942321	99	+	.	Parent=FBgn0039003.1.mrna1;Target=FBgn0039003.1 1807 2648 +
Chr2	stalkie_big_nohaplotig	exon	153942422	153942503	100	+	.	Parent=FBgn0039003.1.mrna1;Target=FBgn0039003.1 2649 2730 +
Chr2	stalkie_big_nohaplotig	CDS	153939479	153939563	.	+	0	Parent=FBgn0039003.1.mrna1;Target=FBgn0039003.1 1 85 +
Chr2	stalkie_big_nohaplotig	CDS	153939629	153939727	.	+	2	Parent=FBgn0039003.1.mrna1;Target=FBgn0039003.1 86 184 +
Chr2	stalkie_big_nohaplotig	CDS	153939790	153941411	.	+	2	Parent=FBgn0039003.1.mrna1;Target=FBgn0039003.1 185 1806 +
Chr2	stalkie_big_nohaplotig	CDS	153941480	153942321	.	+	0	Parent=FBgn0039003.1.mrna1;Target=FBgn0039003.1 1807 2648 +
Chr2	stalkie_big_nohaplotig	CDS	153942422	153942503	.	+	1	Parent=FBgn0039003.1.mrna1;Target=FBgn0039003.1 2649 2730 +
Chr2	gffcl	locus	153933494	153939054	.	-	.	ID=RLOC_00022925;geneIDs=FBgn0039004.1.path1;transcripts=FBgn0039004.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153933494	153939054	.	-	.	ID=FBgn0039004.1.mrna1;geneID=FBgn0039004.1.path1;Name=FBgn0039004.1;Dir=sensecoverage=100.0;identity=99.8;matches=3601;mismatches=8;indels=0;unknowns=0;locus=RLOC_00022925
Chr2	stalkie_big_nohaplotig	exon	153933494	153933648	99	-	.	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 3455 3609 +
Chr2	stalkie_big_nohaplotig	exon	153933789	153934005	99	-	.	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 3238 3454 +
Chr2	stalkie_big_nohaplotig	exon	153934094	153934282	98	-	.	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 3049 3237 +
Chr2	stalkie_big_nohaplotig	exon	153935431	153935783	100	-	.	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 2696 3048 +
Chr2	stalkie_big_nohaplotig	exon	153935846	153936411	99	-	.	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 2130 2695 +
Chr2	stalkie_big_nohaplotig	exon	153936475	153936593	100	-	.	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 2011 2129 +
Chr2	stalkie_big_nohaplotig	exon	153936692	153936896	99	-	.	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 1806 2010 +
Chr2	stalkie_big_nohaplotig	exon	153936963	153937587	100	-	.	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 1181 1805 +
Chr2	stalkie_big_nohaplotig	exon	153937646	153937762	100	-	.	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 1064 1180 +
Chr2	stalkie_big_nohaplotig	exon	153937820	153938006	100	-	.	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 877 1063 +
Chr2	stalkie_big_nohaplotig	exon	153938062	153938568	100	-	.	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 370 876 +
Chr2	stalkie_big_nohaplotig	exon	153938633	153938795	99	-	.	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 207 369 +
Chr2	stalkie_big_nohaplotig	exon	153938849	153939054	99	-	.	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 1 206 +
Chr2	stalkie_big_nohaplotig	CDS	153933494	153933648	.	-	2	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 3455 3609 +
Chr2	stalkie_big_nohaplotig	CDS	153933789	153934005	.	-	0	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 3238 3454 +
Chr2	stalkie_big_nohaplotig	CDS	153934094	153934282	.	-	0	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 3049 3237 +
Chr2	stalkie_big_nohaplotig	CDS	153935431	153935783	.	-	2	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 2696 3048 +
Chr2	stalkie_big_nohaplotig	CDS	153935846	153936411	.	-	1	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 2130 2695 +
Chr2	stalkie_big_nohaplotig	CDS	153936475	153936593	.	-	0	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 2011 2129 +
Chr2	stalkie_big_nohaplotig	CDS	153936692	153936896	.	-	1	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 1806 2010 +
Chr2	stalkie_big_nohaplotig	CDS	153936963	153937587	.	-	2	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 1181 1805 +
Chr2	stalkie_big_nohaplotig	CDS	153937646	153937762	.	-	2	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 1064 1180 +
Chr2	stalkie_big_nohaplotig	CDS	153937820	153938006	.	-	0	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 877 1063 +
Chr2	stalkie_big_nohaplotig	CDS	153938062	153938568	.	-	0	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 370 876 +
Chr2	stalkie_big_nohaplotig	CDS	153938633	153938795	.	-	1	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 207 369 +
Chr2	stalkie_big_nohaplotig	CDS	153938849	153939054	.	-	0	Parent=FBgn0039004.1.mrna1;Target=FBgn0039004.1 1 206 +
Chr2	gffcl	locus	153943666	153945135	.	-	.	ID=RLOC_00022926;geneIDs=comp162435_c0_seq1.path1;transcripts=comp162435_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153943666	153945135	.	-	.	ID=comp162435_c0_seq1.mrna1;geneID=comp162435_c0_seq1.path1;Name=comp162435_c0_seq1;Dir=indeterminatecoverage=99.3;identity=98.2;matches=1453;mismatches=17;indels=10;unknowns=0;Target=comp162435_c0_seq1 1490 11 .;CDS_Target=comp162435_c0_seq1 1323 1096 .;locus=RLOC_00022926
Chr2	stalkie_big_nohaplotig	exon	153943666	153945135	98	-	.	Parent=comp162435_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153943833	153944060	.	-	0	Parent=comp162435_c0_seq1.mrna1
Chr2	gffcl	locus	153946411	153947343	.	+	.	ID=RLOC_00022927;geneIDs=FBgn0046114.1.path1;transcripts=FBgn0046114.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153946411	153947343	.	+	.	ID=FBgn0046114.1.mrna1;geneID=FBgn0046114.1.path1;Name=FBgn0046114.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=933;mismatches=0;indels=0;unknowns=0;Target=FBgn0046114.1 933 1 .;locus=RLOC_00022927
Chr2	stalkie_big_nohaplotig	exon	153946411	153947343	100	+	.	Parent=FBgn0046114.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153946411	153947343	.	+	0	Parent=FBgn0046114.1.mrna1
Chr2	gffcl	locus	153951152	153952405	.	-	.	ID=RLOC_00022928;geneIDs=comp160516_c0_seq1.path1;transcripts=comp160516_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153951152	153952405	.	-	.	ID=comp160516_c0_seq1.mrna1;geneID=comp160516_c0_seq1.path1;Name=comp160516_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.4;matches=1202;mismatches=23;indels=35;unknowns=0;Target=comp160516_c0_seq1 1231 1 .;CDS_Target=comp160516_c0_seq1 384 361 .;locus=RLOC_00022928
Chr2	stalkie_big_nohaplotig	exon	153951152	153952405	95	-	.	Parent=comp160516_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153952022	153952045	.	-	0	Parent=comp160516_c0_seq1.mrna1
Chr2	gffcl	locus	153952420	153953301	.	-	.	ID=RLOC_00022929;geneIDs=comp157916_c0_seq1.path1;transcripts=comp157916_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153952420	153953301	.	-	.	ID=comp157916_c0_seq1.mrna1;geneID=comp157916_c0_seq1.path1;Name=comp157916_c0_seq1;Dir=indeterminatecoverage=98.6;identity=97.4;matches=868;mismatches=14;indels=9;unknowns=0;Target=comp157916_c0_seq1 904 14 .;CDS_Target=comp157916_c0_seq1 863 720 .;locus=RLOC_00022929
Chr2	stalkie_big_nohaplotig	exon	153952420	153953301	97	-	.	Parent=comp157916_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	153952461	153952604	.	-	0	Parent=comp157916_c0_seq1.mrna1
Chr2	gffcl	locus	153955029	153968510	.	-	.	ID=RLOC_00022930;geneIDs=FBgn0039000.1.path1,comp162224_c0_seq1.path1;transcripts=comp162224_c0_seq1.mrna1,FBgn0039000.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153955029	153968510	.	-	.	ID=comp162224_c0_seq1.mrna1;geneID=comp162224_c0_seq1.path1;Name=comp162224_c0_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=6776;mismatches=35;indels=8;unknowns=0;locus=RLOC_00022930
Chr2	stalkie_big_nohaplotig	exon	153955029	153958367	99	-	.	Parent=comp162224_c0_seq1.mrna1;Target=comp162224_c0_seq1 3474 6811 +
Chr2	stalkie_big_nohaplotig	exon	153958435	153958567	100	-	.	Parent=comp162224_c0_seq1.mrna1;Target=comp162224_c0_seq1 3341 3473 +
Chr2	stalkie_big_nohaplotig	exon	153959183	153959393	99	-	.	Parent=comp162224_c0_seq1.mrna1;Target=comp162224_c0_seq1 3130 3340 +
Chr2	stalkie_big_nohaplotig	exon	153959484	153959690	99	-	.	Parent=comp162224_c0_seq1.mrna1;Target=comp162224_c0_seq1 2923 3129 +
Chr2	stalkie_big_nohaplotig	exon	153959963	153960575	98	-	.	Parent=comp162224_c0_seq1.mrna1;Target=comp162224_c0_seq1 2317 2922 +
Chr2	stalkie_big_nohaplotig	exon	153961807	153961910	99	-	.	Parent=comp162224_c0_seq1.mrna1;Target=comp162224_c0_seq1 2213 2316 +
Chr2	stalkie_big_nohaplotig	exon	153962039	153963137	99	-	.	Parent=comp162224_c0_seq1.mrna1;Target=comp162224_c0_seq1 1114 2212 +
Chr2	stalkie_big_nohaplotig	exon	153967398	153968510	99	-	.	Parent=comp162224_c0_seq1.mrna1;Target=comp162224_c0_seq1 1 1113 +
Chr2	stalkie_big_nohaplotig	CDS	153955971	153958367	.	-	0	Parent=comp162224_c0_seq1.mrna1;Target=comp162224_c0_seq1 3474 5870 +
Chr2	stalkie_big_nohaplotig	CDS	153958435	153958567	.	-	1	Parent=comp162224_c0_seq1.mrna1;Target=comp162224_c0_seq1 3341 3473 +
Chr2	stalkie_big_nohaplotig	CDS	153959183	153959393	.	-	2	Parent=comp162224_c0_seq1.mrna1;Target=comp162224_c0_seq1 3130 3340 +
Chr2	stalkie_big_nohaplotig	CDS	153959484	153959690	.	-	2	Parent=comp162224_c0_seq1.mrna1;Target=comp162224_c0_seq1 2923 3129 +
Chr2	stalkie_big_nohaplotig	CDS	153959963	153960218	.	-	0	Parent=comp162224_c0_seq1.mrna1;Target=comp162224_c0_seq1 2667 2922 +
Chr2	stalkie_big_nohaplotig	mRNA	153955974	153968217	.	-	.	ID=FBgn0039000.1.mrna1;geneID=FBgn0039000.1.path1;Name=FBgn0039000.1;Dir=sensecoverage=100.0;identity=99.5;matches=5067;mismatches=24;indels=0;unknowns=0;locus=RLOC_00022930
Chr2	stalkie_big_nohaplotig	exon	153955974	153958367	99	-	.	Parent=FBgn0039000.1.mrna1;Target=FBgn0039000.1 2698 5091 +
Chr2	stalkie_big_nohaplotig	exon	153958435	153958567	100	-	.	Parent=FBgn0039000.1.mrna1;Target=FBgn0039000.1 2565 2697 +
Chr2	stalkie_big_nohaplotig	exon	153959183	153959393	99	-	.	Parent=FBgn0039000.1.mrna1;Target=FBgn0039000.1 2354 2564 +
Chr2	stalkie_big_nohaplotig	exon	153959484	153959690	99	-	.	Parent=FBgn0039000.1.mrna1;Target=FBgn0039000.1 2147 2353 +
Chr2	stalkie_big_nohaplotig	exon	153959963	153960187	100	-	.	Parent=FBgn0039000.1.mrna1;Target=FBgn0039000.1 1922 2146 +
Chr2	stalkie_big_nohaplotig	exon	153960435	153960575	100	-	.	Parent=FBgn0039000.1.mrna1;Target=FBgn0039000.1 1781 1921 +
Chr2	stalkie_big_nohaplotig	exon	153961807	153961910	99	-	.	Parent=FBgn0039000.1.mrna1;Target=FBgn0039000.1 1677 1780 +
Chr2	stalkie_big_nohaplotig	exon	153962039	153962117	100	-	.	Parent=FBgn0039000.1.mrna1;Target=FBgn0039000.1 1598 1676 +
Chr2	stalkie_big_nohaplotig	exon	153962361	153963137	99	-	.	Parent=FBgn0039000.1.mrna1;Target=FBgn0039000.1 821 1597 +
Chr2	stalkie_big_nohaplotig	exon	153967398	153968217	99	-	.	Parent=FBgn0039000.1.mrna1;Target=FBgn0039000.1 1 820 +
Chr2	stalkie_big_nohaplotig	CDS	153955974	153958367	.	-	0	Parent=FBgn0039000.1.mrna1;Target=FBgn0039000.1 2698 5091 +
Chr2	stalkie_big_nohaplotig	CDS	153958435	153958567	.	-	1	Parent=FBgn0039000.1.mrna1;Target=FBgn0039000.1 2565 2697 +
Chr2	stalkie_big_nohaplotig	CDS	153959183	153959393	.	-	2	Parent=FBgn0039000.1.mrna1;Target=FBgn0039000.1 2354 2564 +
Chr2	stalkie_big_nohaplotig	CDS	153959484	153959690	.	-	2	Parent=FBgn0039000.1.mrna1;Target=FBgn0039000.1 2147 2353 +
Chr2	stalkie_big_nohaplotig	CDS	153959963	153960187	.	-	2	Parent=FBgn0039000.1.mrna1;Target=FBgn0039000.1 1922 2146 +
Chr2	stalkie_big_nohaplotig	CDS	153960435	153960575	.	-	2	Parent=FBgn0039000.1.mrna1;Target=FBgn0039000.1 1781 1921 +
Chr2	stalkie_big_nohaplotig	CDS	153961807	153961910	.	-	1	Parent=FBgn0039000.1.mrna1;Target=FBgn0039000.1 1677 1780 +
Chr2	stalkie_big_nohaplotig	CDS	153962039	153962117	.	-	2	Parent=FBgn0039000.1.mrna1;Target=FBgn0039000.1 1598 1676 +
Chr2	stalkie_big_nohaplotig	CDS	153962361	153963137	.	-	2	Parent=FBgn0039000.1.mrna1;Target=FBgn0039000.1 821 1597 +
Chr2	stalkie_big_nohaplotig	CDS	153967398	153968217	.	-	0	Parent=FBgn0039000.1.mrna1;Target=FBgn0039000.1 1 820 +
Chr2	gffcl	locus	153976186	154024070	.	-	.	ID=RLOC_00022931;geneIDs=comp146141_c0_seq1.path1;transcripts=comp146141_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	153976186	154024070	.	-	.	ID=comp146141_c0_seq1.mrna1;geneID=comp146141_c0_seq1.path1;Name=comp146141_c0_seq1;Dir=sensecoverage=100.0;identity=98.8;matches=1889;mismatches=13;indels=10;unknowns=0;locus=RLOC_00022931
Chr2	stalkie_big_nohaplotig	exon	153976186	153976775	98	-	.	Parent=comp146141_c0_seq1.mrna1;Target=comp146141_c0_seq1 1313 1902 +
Chr2	stalkie_big_nohaplotig	exon	153984322	153984681	98	-	.	Parent=comp146141_c0_seq1.mrna1;Target=comp146141_c0_seq1 959 1312 +
Chr2	stalkie_big_nohaplotig	exon	153984840	153985251	98	-	.	Parent=comp146141_c0_seq1.mrna1;Target=comp146141_c0_seq1 547 958 +
Chr2	stalkie_big_nohaplotig	exon	153987985	153988133	100	-	.	Parent=comp146141_c0_seq1.mrna1;Target=comp146141_c0_seq1 398 546 +
Chr2	stalkie_big_nohaplotig	exon	153995534	153995701	97	-	.	Parent=comp146141_c0_seq1.mrna1;Target=comp146141_c0_seq1 234 397 +
Chr2	stalkie_big_nohaplotig	exon	154023838	154024070	99	-	.	Parent=comp146141_c0_seq1.mrna1;Target=comp146141_c0_seq1 1 233 +
Chr2	stalkie_big_nohaplotig	CDS	153976439	153976775	.	-	1	Parent=comp146141_c0_seq1.mrna1;Target=comp146141_c0_seq1 1313 1649 +
Chr2	stalkie_big_nohaplotig	CDS	153984322	153984681	.	-	1	Parent=comp146141_c0_seq1.mrna1;Target=comp146141_c0_seq1 959 1312 +
Chr2	stalkie_big_nohaplotig	CDS	153984840	153985251	.	-	2	Parent=comp146141_c0_seq1.mrna1;Target=comp146141_c0_seq1 547 958 +
Chr2	stalkie_big_nohaplotig	CDS	153987985	153988133	.	-	1	Parent=comp146141_c0_seq1.mrna1;Target=comp146141_c0_seq1 398 546 +
Chr2	stalkie_big_nohaplotig	CDS	153995534	153995664	.	-	0	Parent=comp146141_c0_seq1.mrna1;Target=comp146141_c0_seq1 267 397 +
Chr2	gffcl	locus	154019768	154020838	.	+	.	ID=RLOC_00022932;geneIDs=FBgn0039557.1.path1;transcripts=FBgn0039557.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154019768	154020838	.	+	.	ID=FBgn0039557.1.mrna1;geneID=FBgn0039557.1.path1;Name=FBgn0039557.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1070;mismatches=1;indels=0;unknowns=0;Target=FBgn0039557.1 1071 1 .;locus=RLOC_00022932
Chr2	stalkie_big_nohaplotig	exon	154019768	154020838	99	+	.	Parent=FBgn0039557.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	154019768	154020838	.	+	0	Parent=FBgn0039557.1.mrna1
Chr2	gffcl	locus	154027837	154033528	.	+	.	ID=RLOC_00022933;geneIDs=FBgn0015589.1.path1;transcripts=FBgn0015589.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154027837	154033528	.	+	.	ID=FBgn0015589.1.mrna1;geneID=FBgn0015589.1.path1;Name=FBgn0015589.1;Dir=sensecoverage=100.0;identity=99.7;matches=5490;mismatches=17;indels=1;unknowns=0;locus=RLOC_00022933
Chr2	stalkie_big_nohaplotig	exon	154027837	154031671	99	+	.	Parent=FBgn0015589.1.mrna1;Target=FBgn0015589.1 1 3835 +
Chr2	stalkie_big_nohaplotig	exon	154031731	154032352	99	+	.	Parent=FBgn0015589.1.mrna1;Target=FBgn0015589.1 3836 4457 +
Chr2	stalkie_big_nohaplotig	exon	154032407	154032587	99	+	.	Parent=FBgn0015589.1.mrna1;Target=FBgn0015589.1 4458 4638 +
Chr2	stalkie_big_nohaplotig	exon	154032660	154033528	99	+	.	Parent=FBgn0015589.1.mrna1;Target=FBgn0015589.1 4639 5508 +
Chr2	stalkie_big_nohaplotig	CDS	154027837	154031671	.	+	0	Parent=FBgn0015589.1.mrna1;Target=FBgn0015589.1 1 3835 +
Chr2	stalkie_big_nohaplotig	CDS	154031731	154032352	.	+	2	Parent=FBgn0015589.1.mrna1;Target=FBgn0015589.1 3836 4457 +
Chr2	stalkie_big_nohaplotig	CDS	154032407	154032587	.	+	1	Parent=FBgn0015589.1.mrna1;Target=FBgn0015589.1 4458 4638 +
Chr2	stalkie_big_nohaplotig	CDS	154032660	154033528	.	+	0	Parent=FBgn0015589.1.mrna1;Target=FBgn0015589.1 4639 5508 +
Chr2	gffcl	locus	154038152	154039419	.	-	.	ID=RLOC_00022934;geneIDs=FBgn0039160.1.path1;transcripts=FBgn0039160.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154038152	154039419	.	-	.	ID=FBgn0039160.1.mrna1;geneID=FBgn0039160.1.path1;Name=FBgn0039160.1;Dir=sensecoverage=100.0;identity=100.0;matches=984;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022934
Chr2	stalkie_big_nohaplotig	exon	154038152	154038355	100	-	.	Parent=FBgn0039160.1.mrna1;Target=FBgn0039160.1 781 984 +
Chr2	stalkie_big_nohaplotig	exon	154038417	154038749	100	-	.	Parent=FBgn0039160.1.mrna1;Target=FBgn0039160.1 448 780 +
Chr2	stalkie_big_nohaplotig	exon	154038816	154039013	100	-	.	Parent=FBgn0039160.1.mrna1;Target=FBgn0039160.1 250 447 +
Chr2	stalkie_big_nohaplotig	exon	154039089	154039204	100	-	.	Parent=FBgn0039160.1.mrna1;Target=FBgn0039160.1 134 249 +
Chr2	stalkie_big_nohaplotig	exon	154039287	154039419	100	-	.	Parent=FBgn0039160.1.mrna1;Target=FBgn0039160.1 1 133 +
Chr2	stalkie_big_nohaplotig	CDS	154038152	154038355	.	-	0	Parent=FBgn0039160.1.mrna1;Target=FBgn0039160.1 781 984 +
Chr2	stalkie_big_nohaplotig	CDS	154038417	154038749	.	-	0	Parent=FBgn0039160.1.mrna1;Target=FBgn0039160.1 448 780 +
Chr2	stalkie_big_nohaplotig	CDS	154038816	154039013	.	-	0	Parent=FBgn0039160.1.mrna1;Target=FBgn0039160.1 250 447 +
Chr2	stalkie_big_nohaplotig	CDS	154039089	154039204	.	-	2	Parent=FBgn0039160.1.mrna1;Target=FBgn0039160.1 134 249 +
Chr2	stalkie_big_nohaplotig	CDS	154039287	154039419	.	-	0	Parent=FBgn0039160.1.mrna1;Target=FBgn0039160.1 1 133 +
Chr2	gffcl	locus	154040876	154042047	.	+	.	ID=RLOC_00022935;geneIDs=FBgn0039158.1.path1;transcripts=FBgn0039158.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154040876	154042047	.	+	.	ID=FBgn0039158.1.mrna1;geneID=FBgn0039158.1.path1;Name=FBgn0039158.1;Dir=sensecoverage=100.0;identity=100.0;matches=897;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022935
Chr2	stalkie_big_nohaplotig	exon	154040876	154040941	100	+	.	Parent=FBgn0039158.1.mrna1;Target=FBgn0039158.1 1 66 +
Chr2	stalkie_big_nohaplotig	exon	154041034	154041178	100	+	.	Parent=FBgn0039158.1.mrna1;Target=FBgn0039158.1 67 211 +
Chr2	stalkie_big_nohaplotig	exon	154041242	154041617	100	+	.	Parent=FBgn0039158.1.mrna1;Target=FBgn0039158.1 212 587 +
Chr2	stalkie_big_nohaplotig	exon	154041682	154041907	100	+	.	Parent=FBgn0039158.1.mrna1;Target=FBgn0039158.1 588 813 +
Chr2	stalkie_big_nohaplotig	exon	154041964	154042047	100	+	.	Parent=FBgn0039158.1.mrna1;Target=FBgn0039158.1 814 897 +
Chr2	stalkie_big_nohaplotig	CDS	154040876	154040941	.	+	0	Parent=FBgn0039158.1.mrna1;Target=FBgn0039158.1 1 66 +
Chr2	stalkie_big_nohaplotig	CDS	154041034	154041178	.	+	0	Parent=FBgn0039158.1.mrna1;Target=FBgn0039158.1 67 211 +
Chr2	stalkie_big_nohaplotig	CDS	154041242	154041617	.	+	2	Parent=FBgn0039158.1.mrna1;Target=FBgn0039158.1 212 587 +
Chr2	stalkie_big_nohaplotig	CDS	154041682	154041907	.	+	1	Parent=FBgn0039158.1.mrna1;Target=FBgn0039158.1 588 813 +
Chr2	stalkie_big_nohaplotig	CDS	154041964	154042047	.	+	0	Parent=FBgn0039158.1.mrna1;Target=FBgn0039158.1 814 897 +
Chr2	gffcl	locus	154042104	154042830	.	-	.	ID=RLOC_00022936;geneIDs=FBgn0039159.1.path1;transcripts=FBgn0039159.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154042104	154042830	.	-	.	ID=FBgn0039159.1.mrna1;geneID=FBgn0039159.1.path1;Name=FBgn0039159.1;Dir=sensecoverage=100.0;identity=99.8;matches=608;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022936
Chr2	stalkie_big_nohaplotig	exon	154042104	154042390	99	-	.	Parent=FBgn0039159.1.mrna1;Target=FBgn0039159.1 323 609 +
Chr2	stalkie_big_nohaplotig	exon	154042451	154042643	100	-	.	Parent=FBgn0039159.1.mrna1;Target=FBgn0039159.1 130 322 +
Chr2	stalkie_big_nohaplotig	exon	154042702	154042830	100	-	.	Parent=FBgn0039159.1.mrna1;Target=FBgn0039159.1 1 129 +
Chr2	stalkie_big_nohaplotig	CDS	154042104	154042390	.	-	2	Parent=FBgn0039159.1.mrna1;Target=FBgn0039159.1 323 609 +
Chr2	stalkie_big_nohaplotig	CDS	154042451	154042643	.	-	0	Parent=FBgn0039159.1.mrna1;Target=FBgn0039159.1 130 322 +
Chr2	stalkie_big_nohaplotig	CDS	154042702	154042830	.	-	0	Parent=FBgn0039159.1.mrna1;Target=FBgn0039159.1 1 129 +
Chr2	gffcl	locus	154043899	154052579	.	+	.	ID=RLOC_00022937;geneIDs=FBgn0039157.1.path1;transcripts=FBgn0039157.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154043899	154052579	.	+	.	ID=FBgn0039157.1.mrna1;geneID=FBgn0039157.1.path1;Name=FBgn0039157.1;Dir=sensecoverage=100.0;identity=99.7;matches=3845;mismatches=10;indels=1;unknowns=0;locus=RLOC_00022937
Chr2	stalkie_big_nohaplotig	exon	154043899	154044024	100	+	.	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 1 126 +
Chr2	stalkie_big_nohaplotig	exon	154044084	154044199	100	+	.	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 127 242 +
Chr2	stalkie_big_nohaplotig	exon	154044269	154044339	100	+	.	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 243 313 +
Chr2	stalkie_big_nohaplotig	exon	154044409	154045361	100	+	.	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 314 1266 +
Chr2	stalkie_big_nohaplotig	exon	154045441	154045504	100	+	.	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 1267 1330 +
Chr2	stalkie_big_nohaplotig	exon	154046356	154046440	98	+	.	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 1331 1414 +
Chr2	stalkie_big_nohaplotig	exon	154046519	154046613	100	+	.	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 1415 1509 +
Chr2	stalkie_big_nohaplotig	exon	154046676	154046823	99	+	.	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 1510 1657 +
Chr2	stalkie_big_nohaplotig	exon	154048432	154048530	100	+	.	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 1658 1756 +
Chr2	stalkie_big_nohaplotig	exon	154048601	154048824	100	+	.	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 1757 1980 +
Chr2	stalkie_big_nohaplotig	exon	154048887	154049134	98	+	.	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 1981 2228 +
Chr2	stalkie_big_nohaplotig	exon	154049205	154049341	99	+	.	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 2229 2365 +
Chr2	stalkie_big_nohaplotig	exon	154049425	154049984	100	+	.	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 2366 2925 +
Chr2	stalkie_big_nohaplotig	exon	154050081	154050140	100	+	.	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 2926 2985 +
Chr2	stalkie_big_nohaplotig	exon	154050276	154050607	99	+	.	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 2986 3317 +
Chr2	stalkie_big_nohaplotig	exon	154050663	154050798	100	+	.	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 3318 3453 +
Chr2	stalkie_big_nohaplotig	exon	154052042	154052194	100	+	.	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 3454 3606 +
Chr2	stalkie_big_nohaplotig	exon	154052271	154052398	100	+	.	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 3607 3734 +
Chr2	stalkie_big_nohaplotig	exon	154052459	154052579	98	+	.	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 3735 3855 +
Chr2	stalkie_big_nohaplotig	CDS	154049103	154049134	.	+	0	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 2197 2228 +
Chr2	stalkie_big_nohaplotig	CDS	154049205	154049341	.	+	1	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 2229 2365 +
Chr2	stalkie_big_nohaplotig	CDS	154049425	154049984	.	+	2	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 2366 2925 +
Chr2	stalkie_big_nohaplotig	CDS	154050081	154050140	.	+	0	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 2926 2985 +
Chr2	stalkie_big_nohaplotig	CDS	154050276	154050607	.	+	0	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 2986 3317 +
Chr2	stalkie_big_nohaplotig	CDS	154050663	154050798	.	+	1	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 3318 3453 +
Chr2	stalkie_big_nohaplotig	CDS	154052042	154052194	.	+	0	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 3454 3606 +
Chr2	stalkie_big_nohaplotig	CDS	154052271	154052398	.	+	0	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 3607 3734 +
Chr2	stalkie_big_nohaplotig	CDS	154052459	154052579	.	+	1	Parent=FBgn0039157.1.mrna1;Target=FBgn0039157.1 3735 3855 +
Chr2	stalkie_big_nohaplotig	mRNA	154064541	154064997	.	+	.	ID=comp141628_c0_seq1.mrna1;geneID=comp141628_c0_seq1.path1;Name=comp141628_c0_seq1;Dir=indeterminatecoverage=100.0;identity=94.5;matches=432;mismatches=6;indels=19;unknowns=0;Target=comp141628_c0_seq1 438 1 .;CDS_Target=comp141628_c0_seq1 232 2 .;locus=RLOC_00022938
Chr2	stalkie_big_nohaplotig	exon	154064541	154064997	94	+	.	Parent=comp141628_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	154064542	154064772	.	+	0	Parent=comp141628_c0_seq1.mrna1
Chr2	gffcl	locus	154068629	154069717	.	+	.	ID=RLOC_00022939;geneIDs=FBgn0015765.1.path1;transcripts=FBgn0015765.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154068629	154069717	.	+	.	ID=FBgn0015765.1.mrna1;geneID=FBgn0015765.1.path1;Name=FBgn0015765.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1088;mismatches=1;indels=0;unknowns=0;Target=FBgn0015765.1 1089 1 .;locus=RLOC_00022939
Chr2	stalkie_big_nohaplotig	exon	154068629	154069717	99	+	.	Parent=FBgn0015765.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	154068629	154069717	.	+	0	Parent=FBgn0015765.1.mrna1
Chr2	gffcl	locus	154071090	154072581	.	+	.	ID=RLOC_00022940;geneIDs=FBgn0051133.1.path1;transcripts=FBgn0051133.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154071090	154072581	.	+	.	ID=FBgn0051133.1.mrna1;geneID=FBgn0051133.1.path1;Name=FBgn0051133.1;Dir=sensecoverage=100.0;identity=99.5;matches=1430;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022940
Chr2	stalkie_big_nohaplotig	exon	154071090	154071425	99	+	.	Parent=FBgn0051133.1.mrna1;Target=FBgn0051133.1 1 336 +
Chr2	stalkie_big_nohaplotig	exon	154071481	154072581	99	+	.	Parent=FBgn0051133.1.mrna1;Target=FBgn0051133.1 337 1437 +
Chr2	stalkie_big_nohaplotig	CDS	154071090	154071425	.	+	0	Parent=FBgn0051133.1.mrna1;Target=FBgn0051133.1 1 336 +
Chr2	stalkie_big_nohaplotig	CDS	154071481	154072581	.	+	0	Parent=FBgn0051133.1.mrna1;Target=FBgn0051133.1 337 1437 +
Chr2	gffcl	locus	154072716	154080550	.	-	.	ID=RLOC_00022941;geneIDs=FBgn0039155.1.path1;transcripts=FBgn0039155.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154072716	154080550	.	-	.	ID=FBgn0039155.1.mrna1;geneID=FBgn0039155.1.path1;Name=FBgn0039155.1;Dir=sensecoverage=100.0;identity=99.4;matches=1696;mismatches=11;indels=0;unknowns=0;locus=RLOC_00022941
Chr2	stalkie_big_nohaplotig	exon	154072716	154072871	98	-	.	Parent=FBgn0039155.1.mrna1;Target=FBgn0039155.1 1552 1707 +
Chr2	stalkie_big_nohaplotig	exon	154073222	154073288	100	-	.	Parent=FBgn0039155.1.mrna1;Target=FBgn0039155.1 1485 1551 +
Chr2	stalkie_big_nohaplotig	exon	154073353	154073708	98	-	.	Parent=FBgn0039155.1.mrna1;Target=FBgn0039155.1 1129 1484 +
Chr2	stalkie_big_nohaplotig	exon	154073786	154073991	100	-	.	Parent=FBgn0039155.1.mrna1;Target=FBgn0039155.1 923 1128 +
Chr2	stalkie_big_nohaplotig	exon	154075198	154075316	100	-	.	Parent=FBgn0039155.1.mrna1;Target=FBgn0039155.1 804 922 +
Chr2	stalkie_big_nohaplotig	exon	154075378	154076098	99	-	.	Parent=FBgn0039155.1.mrna1;Target=FBgn0039155.1 83 803 +
Chr2	stalkie_big_nohaplotig	exon	154080469	154080550	100	-	.	Parent=FBgn0039155.1.mrna1;Target=FBgn0039155.1 1 82 +
Chr2	stalkie_big_nohaplotig	CDS	154072716	154072871	.	-	0	Parent=FBgn0039155.1.mrna1;Target=FBgn0039155.1 1552 1707 +
Chr2	stalkie_big_nohaplotig	CDS	154073222	154073288	.	-	1	Parent=FBgn0039155.1.mrna1;Target=FBgn0039155.1 1485 1551 +
Chr2	stalkie_big_nohaplotig	CDS	154073353	154073708	.	-	0	Parent=FBgn0039155.1.mrna1;Target=FBgn0039155.1 1129 1484 +
Chr2	stalkie_big_nohaplotig	CDS	154073786	154073991	.	-	2	Parent=FBgn0039155.1.mrna1;Target=FBgn0039155.1 923 1128 +
Chr2	stalkie_big_nohaplotig	CDS	154075198	154075316	.	-	1	Parent=FBgn0039155.1.mrna1;Target=FBgn0039155.1 804 922 +
Chr2	stalkie_big_nohaplotig	CDS	154075378	154076098	.	-	2	Parent=FBgn0039155.1.mrna1;Target=FBgn0039155.1 83 803 +
Chr2	stalkie_big_nohaplotig	CDS	154080469	154080550	.	-	0	Parent=FBgn0039155.1.mrna1;Target=FBgn0039155.1 1 82 +
Chr2	gffcl	locus	154083047	154089816	.	-	.	ID=RLOC_00022942;geneIDs=FBgn0039154.1.path1;transcripts=FBgn0039154.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154083047	154089816	.	-	.	ID=FBgn0039154.1.mrna1;geneID=FBgn0039154.1.path1;Name=FBgn0039154.1;Dir=sensecoverage=100.0;identity=99.5;matches=427;mismatches=1;indels=1;unknowns=0;Target=FBgn0039154.1 3 59 +;locus=RLOC_00022942
Chr2	stalkie_big_nohaplotig	exon	154083047	154083130	100	-	.	Parent=FBgn0039154.1.mrna1;Target=FBgn0039154.1 346 429 +
Chr2	stalkie_big_nohaplotig	exon	154083188	154083357	100	-	.	Parent=FBgn0039154.1.mrna1;Target=FBgn0039154.1 176 345 +
Chr2	stalkie_big_nohaplotig	exon	154085405	154085512	100	-	.	Parent=FBgn0039154.1.mrna1;Target=FBgn0039154.1 68 175 +
Chr2	stalkie_big_nohaplotig	exon	154089751	154089816	97	-	.	Parent=FBgn0039154.1.mrna1;Target=FBgn0039154.1 1 67 +
Chr2	stalkie_big_nohaplotig	CDS	154089759	154089814	.	-	0	Parent=FBgn0039154.1.mrna1
Chr2	gffcl	locus	154091110	154098395	.	-	.	ID=RLOC_00022943;geneIDs=FBgn0027103.1.path1,comp159179_c0_seq1.path1;transcripts=comp159179_c0_seq1.mrna1,FBgn0027103.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154091110	154094527	.	-	.	ID=comp159179_c0_seq1.mrna1;geneID=comp159179_c0_seq1.path1;Name=comp159179_c0_seq1;Dir=antisensecoverage=100.0;identity=98.8;matches=2907;mismatches=30;indels=6;unknowns=0;locus=RLOC_00022943
Chr2	stalkie_big_nohaplotig	exon	154091110	154091803	96	-	.	Parent=comp159179_c0_seq1.mrna1;Target=comp159179_c0_seq1 1 700 -
Chr2	stalkie_big_nohaplotig	exon	154091871	154092188	99	-	.	Parent=comp159179_c0_seq1.mrna1;Target=comp159179_c0_seq1 701 1018 -
Chr2	stalkie_big_nohaplotig	exon	154092264	154092453	99	-	.	Parent=comp159179_c0_seq1.mrna1;Target=comp159179_c0_seq1 1019 1208 -
Chr2	stalkie_big_nohaplotig	exon	154092536	154093129	99	-	.	Parent=comp159179_c0_seq1.mrna1;Target=comp159179_c0_seq1 1209 1802 -
Chr2	stalkie_big_nohaplotig	exon	154093198	154093415	99	-	.	Parent=comp159179_c0_seq1.mrna1;Target=comp159179_c0_seq1 1803 2020 -
Chr2	stalkie_big_nohaplotig	exon	154093545	154094240	99	-	.	Parent=comp159179_c0_seq1.mrna1;Target=comp159179_c0_seq1 2021 2716 -
Chr2	stalkie_big_nohaplotig	exon	154094301	154094527	100	-	.	Parent=comp159179_c0_seq1.mrna1;Target=comp159179_c0_seq1 2717 2943 -
Chr2	stalkie_big_nohaplotig	CDS	154091705	154091803	.	-	0	Parent=comp159179_c0_seq1.mrna1;Target=comp159179_c0_seq1 602 700 .
Chr2	stalkie_big_nohaplotig	CDS	154091871	154092188	.	-	0	Parent=comp159179_c0_seq1.mrna1;Target=comp159179_c0_seq1 701 1018 .
Chr2	stalkie_big_nohaplotig	CDS	154092264	154092453	.	-	1	Parent=comp159179_c0_seq1.mrna1;Target=comp159179_c0_seq1 1019 1208 .
Chr2	stalkie_big_nohaplotig	CDS	154092536	154093129	.	-	1	Parent=comp159179_c0_seq1.mrna1;Target=comp159179_c0_seq1 1209 1802 .
Chr2	stalkie_big_nohaplotig	CDS	154093198	154093415	.	-	0	Parent=comp159179_c0_seq1.mrna1;Target=comp159179_c0_seq1 1803 2020 .
Chr2	stalkie_big_nohaplotig	CDS	154093545	154094240	.	-	0	Parent=comp159179_c0_seq1.mrna1;Target=comp159179_c0_seq1 2021 2716 .
Chr2	stalkie_big_nohaplotig	CDS	154094301	154094333	.	-	0	Parent=comp159179_c0_seq1.mrna1;Target=comp159179_c0_seq1 2717 2749 .
Chr2	stalkie_big_nohaplotig	mRNA	154091708	154098395	.	-	.	ID=FBgn0027103.1.mrna1;geneID=FBgn0027103.1.path1;Name=FBgn0027103.1;Dir=sensecoverage=100.0;identity=99.4;matches=2139;mismatches=12;indels=0;unknowns=0;locus=RLOC_00022943
Chr2	stalkie_big_nohaplotig	exon	154091708	154091803	98	-	.	Parent=FBgn0027103.1.mrna1;Target=FBgn0027103.1 2056 2151 +
Chr2	stalkie_big_nohaplotig	exon	154091871	154092188	99	-	.	Parent=FBgn0027103.1.mrna1;Target=FBgn0027103.1 1738 2055 +
Chr2	stalkie_big_nohaplotig	exon	154092264	154092453	99	-	.	Parent=FBgn0027103.1.mrna1;Target=FBgn0027103.1 1548 1737 +
Chr2	stalkie_big_nohaplotig	exon	154092536	154093129	99	-	.	Parent=FBgn0027103.1.mrna1;Target=FBgn0027103.1 954 1547 +
Chr2	stalkie_big_nohaplotig	exon	154097254	154097471	99	-	.	Parent=FBgn0027103.1.mrna1;Target=FBgn0027103.1 736 953 +
Chr2	stalkie_big_nohaplotig	exon	154097601	154098296	99	-	.	Parent=FBgn0027103.1.mrna1;Target=FBgn0027103.1 40 735 +
Chr2	stalkie_big_nohaplotig	exon	154098357	154098395	100	-	.	Parent=FBgn0027103.1.mrna1;Target=FBgn0027103.1 1 39 +
Chr2	stalkie_big_nohaplotig	CDS	154091708	154091803	.	-	0	Parent=FBgn0027103.1.mrna1;Target=FBgn0027103.1 2056 2151 +
Chr2	stalkie_big_nohaplotig	CDS	154091871	154092188	.	-	0	Parent=FBgn0027103.1.mrna1;Target=FBgn0027103.1 1738 2055 +
Chr2	stalkie_big_nohaplotig	CDS	154092264	154092453	.	-	1	Parent=FBgn0027103.1.mrna1;Target=FBgn0027103.1 1548 1737 +
Chr2	stalkie_big_nohaplotig	CDS	154092536	154093129	.	-	1	Parent=FBgn0027103.1.mrna1;Target=FBgn0027103.1 954 1547 +
Chr2	stalkie_big_nohaplotig	CDS	154097254	154097471	.	-	0	Parent=FBgn0027103.1.mrna1;Target=FBgn0027103.1 736 953 +
Chr2	stalkie_big_nohaplotig	CDS	154097601	154098296	.	-	0	Parent=FBgn0027103.1.mrna1;Target=FBgn0027103.1 40 735 +
Chr2	stalkie_big_nohaplotig	CDS	154098357	154098395	.	-	0	Parent=FBgn0027103.1.mrna1;Target=FBgn0027103.1 1 39 +
Chr2	gffcl	locus	154099911	154100248	.	+	.	ID=RLOC_00022944;geneIDs=comp421855_c0_seq1.path1;transcripts=comp421855_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154099911	154100248	.	+	.	ID=comp421855_c0_seq1.mrna1;geneID=comp421855_c0_seq1.path1;Name=comp421855_c0_seq1;Dir=indeterminatecoverage=94.9;identity=99.7;matches=337;mismatches=1;indels=0;unknowns=0;Target=comp421855_c0_seq1 353 16 .;CDS_Target=comp421855_c0_seq1 242 18 .;locus=RLOC_00022944
Chr2	stalkie_big_nohaplotig	exon	154099911	154100248	99	+	.	Parent=comp421855_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	154099913	154100137	.	+	0	Parent=comp421855_c0_seq1.mrna1
Chr2	gffcl	locus	154100505	154104473	.	-	.	ID=RLOC_00022945;geneIDs=FBgn0026317.1.path1;transcripts=FBgn0026317.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154100505	154104473	.	-	.	ID=FBgn0026317.1.mrna1;geneID=FBgn0026317.1.path1;Name=FBgn0026317.1;Dir=sensecoverage=100.0;identity=99.7;matches=3387;mismatches=9;indels=0;unknowns=0;locus=RLOC_00022945
Chr2	stalkie_big_nohaplotig	exon	154100505	154100845	99	-	.	Parent=FBgn0026317.1.mrna1;Target=FBgn0026317.1 3056 3396 +
Chr2	stalkie_big_nohaplotig	exon	154100928	154101057	100	-	.	Parent=FBgn0026317.1.mrna1;Target=FBgn0026317.1 2926 3055 +
Chr2	stalkie_big_nohaplotig	exon	154101117	154101274	100	-	.	Parent=FBgn0026317.1.mrna1;Target=FBgn0026317.1 2768 2925 +
Chr2	stalkie_big_nohaplotig	exon	154101329	154101926	99	-	.	Parent=FBgn0026317.1.mrna1;Target=FBgn0026317.1 2170 2767 +
Chr2	stalkie_big_nohaplotig	exon	154102031	154102659	99	-	.	Parent=FBgn0026317.1.mrna1;Target=FBgn0026317.1 1541 2169 +
Chr2	stalkie_big_nohaplotig	exon	154102721	154103420	100	-	.	Parent=FBgn0026317.1.mrna1;Target=FBgn0026317.1 841 1540 +
Chr2	stalkie_big_nohaplotig	exon	154103474	154103926	100	-	.	Parent=FBgn0026317.1.mrna1;Target=FBgn0026317.1 388 840 +
Chr2	stalkie_big_nohaplotig	exon	154104001	154104257	100	-	.	Parent=FBgn0026317.1.mrna1;Target=FBgn0026317.1 131 387 +
Chr2	stalkie_big_nohaplotig	exon	154104344	154104473	99	-	.	Parent=FBgn0026317.1.mrna1;Target=FBgn0026317.1 1 130 +
Chr2	stalkie_big_nohaplotig	CDS	154100505	154100845	.	-	2	Parent=FBgn0026317.1.mrna1;Target=FBgn0026317.1 3056 3396 +
Chr2	stalkie_big_nohaplotig	CDS	154100928	154101057	.	-	0	Parent=FBgn0026317.1.mrna1;Target=FBgn0026317.1 2926 3055 +
Chr2	stalkie_big_nohaplotig	CDS	154101117	154101274	.	-	2	Parent=FBgn0026317.1.mrna1;Target=FBgn0026317.1 2768 2925 +
Chr2	stalkie_big_nohaplotig	CDS	154101329	154101926	.	-	0	Parent=FBgn0026317.1.mrna1;Target=FBgn0026317.1 2170 2767 +
Chr2	stalkie_big_nohaplotig	CDS	154102031	154102659	.	-	2	Parent=FBgn0026317.1.mrna1;Target=FBgn0026317.1 1541 2169 +
Chr2	stalkie_big_nohaplotig	CDS	154102721	154103420	.	-	0	Parent=FBgn0026317.1.mrna1;Target=FBgn0026317.1 841 1540 +
Chr2	stalkie_big_nohaplotig	CDS	154103474	154103926	.	-	0	Parent=FBgn0026317.1.mrna1;Target=FBgn0026317.1 388 840 +
Chr2	stalkie_big_nohaplotig	CDS	154104001	154104257	.	-	2	Parent=FBgn0026317.1.mrna1;Target=FBgn0026317.1 131 387 +
Chr2	stalkie_big_nohaplotig	CDS	154104344	154104473	.	-	0	Parent=FBgn0026317.1.mrna1;Target=FBgn0026317.1 1 130 +
Chr2	gffcl	locus	154106628	154109597	.	+	.	ID=RLOC_00022946;geneIDs=FBgn0039153.1.path1;transcripts=FBgn0039153.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154106628	154109597	.	+	.	ID=FBgn0039153.1.mrna1;geneID=FBgn0039153.1.path1;Name=FBgn0039153.1;Dir=sensecoverage=100.0;identity=99.7;matches=1615;mismatches=5;indels=0;unknowns=0;locus=RLOC_00022946
Chr2	stalkie_big_nohaplotig	exon	154106628	154106773	100	+	.	Parent=FBgn0039153.1.mrna1;Target=FBgn0039153.1 1 146 +
Chr2	stalkie_big_nohaplotig	exon	154106858	154107002	100	+	.	Parent=FBgn0039153.1.mrna1;Target=FBgn0039153.1 147 291 +
Chr2	stalkie_big_nohaplotig	exon	154107053	154107166	99	+	.	Parent=FBgn0039153.1.mrna1;Target=FBgn0039153.1 292 405 +
Chr2	stalkie_big_nohaplotig	exon	154107236	154107402	98	+	.	Parent=FBgn0039153.1.mrna1;Target=FBgn0039153.1 406 572 +
Chr2	stalkie_big_nohaplotig	exon	154107458	154107606	100	+	.	Parent=FBgn0039153.1.mrna1;Target=FBgn0039153.1 573 721 +
Chr2	stalkie_big_nohaplotig	exon	154107659	154108077	99	+	.	Parent=FBgn0039153.1.mrna1;Target=FBgn0039153.1 722 1140 +
Chr2	stalkie_big_nohaplotig	exon	154108140	154108276	100	+	.	Parent=FBgn0039153.1.mrna1;Target=FBgn0039153.1 1141 1277 +
Chr2	stalkie_big_nohaplotig	exon	154109196	154109319	99	+	.	Parent=FBgn0039153.1.mrna1;Target=FBgn0039153.1 1278 1401 +
Chr2	stalkie_big_nohaplotig	exon	154109379	154109597	100	+	.	Parent=FBgn0039153.1.mrna1;Target=FBgn0039153.1 1402 1620 +
Chr2	stalkie_big_nohaplotig	CDS	154106628	154106773	.	+	0	Parent=FBgn0039153.1.mrna1;Target=FBgn0039153.1 1 146 +
Chr2	stalkie_big_nohaplotig	CDS	154106858	154107002	.	+	1	Parent=FBgn0039153.1.mrna1;Target=FBgn0039153.1 147 291 +
Chr2	stalkie_big_nohaplotig	CDS	154107053	154107166	.	+	0	Parent=FBgn0039153.1.mrna1;Target=FBgn0039153.1 292 405 +
Chr2	stalkie_big_nohaplotig	CDS	154107236	154107402	.	+	0	Parent=FBgn0039153.1.mrna1;Target=FBgn0039153.1 406 572 +
Chr2	stalkie_big_nohaplotig	CDS	154107458	154107606	.	+	1	Parent=FBgn0039153.1.mrna1;Target=FBgn0039153.1 573 721 +
Chr2	stalkie_big_nohaplotig	CDS	154107659	154108077	.	+	2	Parent=FBgn0039153.1.mrna1;Target=FBgn0039153.1 722 1140 +
Chr2	stalkie_big_nohaplotig	CDS	154108140	154108276	.	+	0	Parent=FBgn0039153.1.mrna1;Target=FBgn0039153.1 1141 1277 +
Chr2	stalkie_big_nohaplotig	CDS	154109196	154109319	.	+	1	Parent=FBgn0039153.1.mrna1;Target=FBgn0039153.1 1278 1401 +
Chr2	stalkie_big_nohaplotig	CDS	154109379	154109597	.	+	0	Parent=FBgn0039153.1.mrna1;Target=FBgn0039153.1 1402 1620 +
Chr2	gffcl	locus	154110249	154113595	.	.	.	ID=RLOC_00022947;geneIDs=FBgn0039152.path1,FBgn0039152.path2;transcripts=FBgn0039152.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	154110249	154113466	.	-	.	ID=FBgn0039152.mrna2;geneID=FBgn0039152.path2;Name=FBgn0039152;Dir=sensecoverage=90.1;identity=99.9;matches=2498;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022947
Chr2	stalkie_big_nohaplotig	exon	154110249	154110309	100	-	.	Parent=FBgn0039152.mrna2;Target=FBgn0039152 2715 2775 +
Chr2	stalkie_big_nohaplotig	exon	154110377	154110552	100	-	.	Parent=FBgn0039152.mrna2;Target=FBgn0039152 2539 2714 +
Chr2	stalkie_big_nohaplotig	exon	154110609	154111727	99	-	.	Parent=FBgn0039152.mrna2;Target=FBgn0039152 1420 2538 +
Chr2	stalkie_big_nohaplotig	exon	154112267	154113112	100	-	.	Parent=FBgn0039152.mrna2;Target=FBgn0039152 574 1419 +
Chr2	stalkie_big_nohaplotig	exon	154113168	154113466	99	-	.	Parent=FBgn0039152.mrna2;Target=FBgn0039152 275 573 +
Chr2	stalkie_big_nohaplotig	CDS	154110249	154110309	.	-	0	Parent=FBgn0039152.mrna2;Target=FBgn0039152 2715 2775 +
Chr2	stalkie_big_nohaplotig	CDS	154110377	154110552	.	-	2	Parent=FBgn0039152.mrna2;Target=FBgn0039152 2539 2714 +
Chr2	stalkie_big_nohaplotig	CDS	154110609	154111727	.	-	2	Parent=FBgn0039152.mrna2;Target=FBgn0039152 1420 2538 +
Chr2	stalkie_big_nohaplotig	CDS	154112267	154113112	.	-	2	Parent=FBgn0039152.mrna2;Target=FBgn0039152 574 1419 +
Chr2	stalkie_big_nohaplotig	CDS	154113168	154113466	.	-	1	Parent=FBgn0039152.mrna2;Target=FBgn0039152 275 573 +
Chr2	gffcl	locus	154124929	154125933	.	+	.	ID=RLOC_00022948;geneIDs=comp131123_c0_seq1.path1;transcripts=comp131123_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154124929	154125933	.	+	.	ID=comp131123_c0_seq1.mrna1;geneID=comp131123_c0_seq1.path1;Name=comp131123_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.5;matches=1001;mismatches=4;indels=22;unknowns=0;Target=comp131123_c0_seq1 1027 1 .;CDS_Target=comp131123_c0_seq1 393 211 .;locus=RLOC_00022948
Chr2	stalkie_big_nohaplotig	exon	154124929	154125933	97	+	.	Parent=comp131123_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	154125139	154125321	.	+	0	Parent=comp131123_c0_seq1.mrna1
Chr2	gffcl	locus	154126768	154128041	.	+	.	ID=RLOC_00022949;geneIDs=FBgn0039151.1.path1;transcripts=FBgn0039151.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154126768	154128041	.	+	.	ID=FBgn0039151.1.mrna1;geneID=FBgn0039151.1.path1;Name=FBgn0039151.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1268;mismatches=6;indels=1;unknowns=0;Target=FBgn0039151.1 1275 1 .;locus=RLOC_00022949
Chr2	stalkie_big_nohaplotig	exon	154126768	154128041	99	+	.	Parent=FBgn0039151.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	154126768	154128041	.	+	0	Parent=FBgn0039151.1.mrna1
Chr2	gffcl	locus	154135622	154136155	.	-	.	ID=RLOC_00022950;geneIDs=FBgn0039145.1.path1;transcripts=FBgn0039145.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154135622	154136155	.	-	.	ID=FBgn0039145.1.mrna1;geneID=FBgn0039145.1.path1;Name=FBgn0039145.1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=532;mismatches=2;indels=0;unknowns=0;Target=FBgn0039145.1 534 1 .;locus=RLOC_00022950
Chr2	stalkie_big_nohaplotig	exon	154135622	154136155	99	-	.	Parent=FBgn0039145.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	154135622	154136155	.	-	0	Parent=FBgn0039145.1.mrna1
Chr2	gffcl	locus	154139897	154141168	.	-	.	ID=RLOC_00022951;geneIDs=FBgn0026576.1.path1;transcripts=FBgn0026576.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154139897	154141168	.	-	.	ID=FBgn0026576.1.mrna1;geneID=FBgn0026576.1.path1;Name=FBgn0026576.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1268;mismatches=4;indels=0;unknowns=0;Target=FBgn0026576.1 1272 1 .;locus=RLOC_00022951
Chr2	stalkie_big_nohaplotig	exon	154139897	154141168	99	-	.	Parent=FBgn0026576.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	154139897	154141168	.	-	0	Parent=FBgn0026576.1.mrna1
Chr2	gffcl	locus	154143016	154144148	.	+	.	ID=RLOC_00022952;geneIDs=FBgn0264325.1.path1;transcripts=FBgn0264325.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154143016	154144148	.	+	.	ID=FBgn0264325.1.mrna1;geneID=FBgn0264325.1.path1;Name=FBgn0264325.1;Dir=sensecoverage=100.0;identity=99.1;matches=1061;mismatches=9;indels=1;unknowns=0;Target=FBgn0264325.1 3 98 +;locus=RLOC_00022952
Chr2	stalkie_big_nohaplotig	exon	154143016	154143979	99	+	.	Parent=FBgn0264325.1.mrna1;Target=FBgn0264325.1 1 965 +
Chr2	stalkie_big_nohaplotig	exon	154144043	154144148	99	+	.	Parent=FBgn0264325.1.mrna1;Target=FBgn0264325.1 966 1071 +
Chr2	stalkie_big_nohaplotig	CDS	154143018	154143112	.	+	0	Parent=FBgn0264325.1.mrna1
Chr2	gffcl	locus	154144724	154145534	.	-	.	ID=RLOC_00022953;geneIDs=FBgn0043455.1.path1;transcripts=FBgn0043455.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154144724	154145534	.	-	.	ID=FBgn0043455.1.mrna1;geneID=FBgn0043455.1.path1;Name=FBgn0043455.1;Dir=sensecoverage=100.0;identity=99.1;matches=690;mismatches=6;indels=0;unknowns=0;locus=RLOC_00022953
Chr2	stalkie_big_nohaplotig	exon	154144724	154145305	99	-	.	Parent=FBgn0043455.1.mrna1;Target=FBgn0043455.1 115 696 +
Chr2	stalkie_big_nohaplotig	exon	154145421	154145534	99	-	.	Parent=FBgn0043455.1.mrna1;Target=FBgn0043455.1 1 114 +
Chr2	stalkie_big_nohaplotig	CDS	154144724	154145305	.	-	0	Parent=FBgn0043455.1.mrna1;Target=FBgn0043455.1 115 696 +
Chr2	stalkie_big_nohaplotig	CDS	154145421	154145534	.	-	0	Parent=FBgn0043455.1.mrna1;Target=FBgn0043455.1 1 114 +
Chr2	gffcl	locus	154145682	154146544	.	+	.	ID=RLOC_00022954;geneIDs=FBgn0038235.1.path1;transcripts=FBgn0038235.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154145682	154146544	.	+	.	ID=FBgn0038235.1.mrna1;geneID=FBgn0038235.1.path1;Name=FBgn0038235.1;Dir=sensecoverage=100.0;identity=99.1;matches=734;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022954
Chr2	stalkie_big_nohaplotig	exon	154145682	154145756	94	+	.	Parent=FBgn0038235.1.mrna1;Target=FBgn0038235.1 1 75 +
Chr2	stalkie_big_nohaplotig	exon	154145817	154146354	99	+	.	Parent=FBgn0038235.1.mrna1;Target=FBgn0038235.1 76 613 +
Chr2	stalkie_big_nohaplotig	exon	154146417	154146544	100	+	.	Parent=FBgn0038235.1.mrna1;Target=FBgn0038235.1 614 741 +
Chr2	stalkie_big_nohaplotig	CDS	154145682	154145756	.	+	0	Parent=FBgn0038235.1.mrna1;Target=FBgn0038235.1 1 75 +
Chr2	stalkie_big_nohaplotig	CDS	154145817	154146354	.	+	0	Parent=FBgn0038235.1.mrna1;Target=FBgn0038235.1 76 613 +
Chr2	stalkie_big_nohaplotig	CDS	154146417	154146544	.	+	2	Parent=FBgn0038235.1.mrna1;Target=FBgn0038235.1 614 741 +
Chr2	gffcl	locus	154146592	154147294	.	-	.	ID=RLOC_00022955;geneIDs=FBgn0038234.1.path1;transcripts=FBgn0038234.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154146592	154147294	.	-	.	ID=FBgn0038234.1.mrna1;geneID=FBgn0038234.1.path1;Name=FBgn0038234.1;Dir=sensecoverage=100.0;identity=98.8;matches=578;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022955
Chr2	stalkie_big_nohaplotig	exon	154146592	154146759	98	-	.	Parent=FBgn0038234.1.mrna1;Target=FBgn0038234.1 418 585 +
Chr2	stalkie_big_nohaplotig	exon	154146823	154147107	98	-	.	Parent=FBgn0038234.1.mrna1;Target=FBgn0038234.1 133 417 +
Chr2	stalkie_big_nohaplotig	exon	154147163	154147294	98	-	.	Parent=FBgn0038234.1.mrna1;Target=FBgn0038234.1 1 132 +
Chr2	stalkie_big_nohaplotig	CDS	154146592	154146759	.	-	0	Parent=FBgn0038234.1.mrna1;Target=FBgn0038234.1 418 585 +
Chr2	stalkie_big_nohaplotig	CDS	154146823	154147107	.	-	0	Parent=FBgn0038234.1.mrna1;Target=FBgn0038234.1 133 417 +
Chr2	stalkie_big_nohaplotig	CDS	154147163	154147294	.	-	0	Parent=FBgn0038234.1.mrna1;Target=FBgn0038234.1 1 132 +
Chr2	gffcl	locus	154148417	154151688	.	+	.	ID=RLOC_00022956;geneIDs=FBgn0039141.1.path1;transcripts=FBgn0039141.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154148417	154151688	.	+	.	ID=FBgn0039141.1.mrna1;geneID=FBgn0039141.1.path1;Name=FBgn0039141.1;Dir=sensecoverage=100.0;identity=99.7;matches=2301;mismatches=6;indels=0;unknowns=0;locus=RLOC_00022956
Chr2	stalkie_big_nohaplotig	exon	154148417	154149119	100	+	.	Parent=FBgn0039141.1.mrna1;Target=FBgn0039141.1 1 703 +
Chr2	stalkie_big_nohaplotig	exon	154149229	154149399	99	+	.	Parent=FBgn0039141.1.mrna1;Target=FBgn0039141.1 704 874 +
Chr2	stalkie_big_nohaplotig	exon	154149609	154149878	99	+	.	Parent=FBgn0039141.1.mrna1;Target=FBgn0039141.1 875 1144 +
Chr2	stalkie_big_nohaplotig	exon	154150310	154150479	100	+	.	Parent=FBgn0039141.1.mrna1;Target=FBgn0039141.1 1145 1314 +
Chr2	stalkie_big_nohaplotig	exon	154150637	154150886	99	+	.	Parent=FBgn0039141.1.mrna1;Target=FBgn0039141.1 1315 1564 +
Chr2	stalkie_big_nohaplotig	exon	154150946	154151688	99	+	.	Parent=FBgn0039141.1.mrna1;Target=FBgn0039141.1 1565 2307 +
Chr2	stalkie_big_nohaplotig	CDS	154148417	154149119	.	+	0	Parent=FBgn0039141.1.mrna1;Target=FBgn0039141.1 1 703 +
Chr2	stalkie_big_nohaplotig	CDS	154149229	154149399	.	+	2	Parent=FBgn0039141.1.mrna1;Target=FBgn0039141.1 704 874 +
Chr2	stalkie_big_nohaplotig	CDS	154149609	154149878	.	+	2	Parent=FBgn0039141.1.mrna1;Target=FBgn0039141.1 875 1144 +
Chr2	stalkie_big_nohaplotig	CDS	154150310	154150479	.	+	2	Parent=FBgn0039141.1.mrna1;Target=FBgn0039141.1 1145 1314 +
Chr2	stalkie_big_nohaplotig	CDS	154150637	154150886	.	+	0	Parent=FBgn0039141.1.mrna1;Target=FBgn0039141.1 1315 1564 +
Chr2	stalkie_big_nohaplotig	CDS	154150946	154151688	.	+	2	Parent=FBgn0039141.1.mrna1;Target=FBgn0039141.1 1565 2307 +
Chr2	gffcl	locus	154152467	154153554	.	+	.	ID=RLOC_00022957;geneIDs=comp154717_c0_seq1.path1;transcripts=comp154717_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154152467	154153554	.	+	.	ID=comp154717_c0_seq1.mrna1;geneID=comp154717_c0_seq1.path1;Name=comp154717_c0_seq1;Dir=indeterminatecoverage=98.0;identity=98.8;matches=1082;mismatches=4;indels=9;unknowns=0;Target=comp154717_c0_seq1 1115 23 .;CDS_Target=comp154717_c0_seq1 744 652 .;locus=RLOC_00022957
Chr2	stalkie_big_nohaplotig	exon	154152467	154153554	98	+	.	Parent=comp154717_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	154153096	154153181	.	+	0	Parent=comp154717_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154160216	154161191	.	-	.	ID=comp135045_c0_seq1.mrna1;geneID=comp135045_c0_seq1.path1;Name=comp135045_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=358;mismatches=0;indels=2;unknowns=0;Target=comp135045_c0_seq1 307 318 .;locus=RLOC_00022958
Chr2	stalkie_big_nohaplotig	exon	154160216	154160238	100	-	.	Parent=comp135045_c0_seq1.mrna1;Target=comp135045_c0_seq1 1 23 -
Chr2	stalkie_big_nohaplotig	exon	154160857	154161191	99	-	.	Parent=comp135045_c0_seq1.mrna1;Target=comp135045_c0_seq1 24 360 -
Chr2	stalkie_big_nohaplotig	CDS	154161139	154161149	.	-	0	Parent=comp135045_c0_seq1.mrna1
Chr2	gffcl	locus	154164902	154165370	.	+	.	ID=RLOC_00022959;geneIDs=FBgn0039149.1.path1;transcripts=FBgn0039149.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154164902	154165370	.	+	.	ID=FBgn0039149.1.mrna1;geneID=FBgn0039149.1.path1;Name=FBgn0039149.1;Dir=sensecoverage=100.0;identity=99.8;matches=410;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022959
Chr2	stalkie_big_nohaplotig	exon	154164902	154165079	99	+	.	Parent=FBgn0039149.1.mrna1;Target=FBgn0039149.1 1 178 +
Chr2	stalkie_big_nohaplotig	exon	154165138	154165370	100	+	.	Parent=FBgn0039149.1.mrna1;Target=FBgn0039149.1 179 411 +
Chr2	stalkie_big_nohaplotig	CDS	154164902	154165079	.	+	0	Parent=FBgn0039149.1.mrna1;Target=FBgn0039149.1 1 178 +
Chr2	stalkie_big_nohaplotig	CDS	154165138	154165370	.	+	2	Parent=FBgn0039149.1.mrna1;Target=FBgn0039149.1 179 411 +
Chr2	gffcl	locus	154165519	154394034	.	-	.	ID=RLOC_00022960;geneIDs=FBgn0003308.1.path1,FBgn0003308.2.path1,FBgn0003308.2.path2,FBgn0039150.1.path1,comp151957_c0_seq1.path1;transcripts=comp151957_c0_seq1.mrna1,FBgn0039150.1.mrna1,FBgn0003308.1.mrna1,FBgn0003308.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	154165519	154394034	.	-	.	ID=comp151957_c0_seq1.mrna1;geneID=comp151957_c0_seq1.path1;Name=comp151957_c0_seq1;Dir=antisensecoverage=29.0;identity=95.8;matches=714;mismatches=20;indels=11;unknowns=7;locus=RLOC_00022960
Chr2	stalkie_big_nohaplotig	exon	154165519	154165935	100	-	.	Parent=comp151957_c0_seq1.mrna1;Target=comp151957_c0_seq1 1 417 -
Chr2	stalkie_big_nohaplotig	exon	154166011	154166118	99	-	.	Parent=comp151957_c0_seq1.mrna1;Target=comp151957_c0_seq1 418 525 -
Chr2	stalkie_big_nohaplotig	exon	154166174	154166240	100	-	.	Parent=comp151957_c0_seq1.mrna1;Target=comp151957_c0_seq1 526 592 -
Chr2	stalkie_big_nohaplotig	exon	154177710	154177718	100	-	.	Parent=comp151957_c0_seq1.mrna1;Target=comp151957_c0_seq1 593 601 -
Chr2	stalkie_big_nohaplotig	exon	154205817	154205876	57	-	.	Parent=comp151957_c0_seq1.mrna1;Target=comp151957_c0_seq1 602 666 -
Chr2	stalkie_big_nohaplotig	exon	154230253	154230256	100	-	.	Parent=comp151957_c0_seq1.mrna1;Target=comp151957_c0_seq1 667 670 -
Chr2	stalkie_big_nohaplotig	exon	154253110	154253114	100	-	.	Parent=comp151957_c0_seq1.mrna1;Target=comp151957_c0_seq1 671 675 -
Chr2	stalkie_big_nohaplotig	exon	154260245	154260249	100	-	.	Parent=comp151957_c0_seq1.mrna1;Target=comp151957_c0_seq1 676 680 -
Chr2	stalkie_big_nohaplotig	exon	154262262	154262268	100	-	.	Parent=comp151957_c0_seq1.mrna1;Target=comp151957_c0_seq1 681 687 -
Chr2	stalkie_big_nohaplotig	exon	154265457	154265463	85	-	.	Parent=comp151957_c0_seq1.mrna1;Target=comp151957_c0_seq1 688 694 -
Chr2	stalkie_big_nohaplotig	exon	154315181	154315185	100	-	.	Parent=comp151957_c0_seq1.mrna1;Target=comp151957_c0_seq1 695 699 -
Chr2	stalkie_big_nohaplotig	exon	154348802	154348803	100	-	.	Parent=comp151957_c0_seq1.mrna1;Target=comp151957_c0_seq1 700 701 -
Chr2	stalkie_big_nohaplotig	exon	154353325	154353332	100	-	.	Parent=comp151957_c0_seq1.mrna1;Target=comp151957_c0_seq1 702 709 -
Chr2	stalkie_big_nohaplotig	exon	154353337	154353343	100	-	.	Parent=comp151957_c0_seq1.mrna1;Target=comp151957_c0_seq1 750 756 -
Chr2	stalkie_big_nohaplotig	exon	154360106	154360107	100	-	.	Parent=comp151957_c0_seq1.mrna1;Target=comp151957_c0_seq1 757 758 -
Chr2	stalkie_big_nohaplotig	exon	154387979	154387983	100	-	.	Parent=comp151957_c0_seq1.mrna1;Target=comp151957_c0_seq1 759 763 -
Chr2	stalkie_big_nohaplotig	exon	154388410	154388418	100	-	.	Parent=comp151957_c0_seq1.mrna1;Target=comp151957_c0_seq1 764 772 -
Chr2	stalkie_big_nohaplotig	exon	154392143	154392152	100	-	.	Parent=comp151957_c0_seq1.mrna1;Target=comp151957_c0_seq1 773 782 -
Chr2	stalkie_big_nohaplotig	exon	154394028	154394034	100	-	.	Parent=comp151957_c0_seq1.mrna1;Target=comp151957_c0_seq1 783 789 -
Chr2	stalkie_big_nohaplotig	CDS	154165702	154165935	.	-	0	Parent=comp151957_c0_seq1.mrna1;Target=comp151957_c0_seq1 184 417 .
Chr2	stalkie_big_nohaplotig	CDS	154166011	154166118	.	-	0	Parent=comp151957_c0_seq1.mrna1;Target=comp151957_c0_seq1 418 525 .
Chr2	stalkie_big_nohaplotig	CDS	154166174	154166209	.	-	0	Parent=comp151957_c0_seq1.mrna1;Target=comp151957_c0_seq1 526 561 .
Chr2	stalkie_big_nohaplotig	mRNA	154165705	154327107	.	-	.	ID=FBgn0039150.1.mrna1;geneID=FBgn0039150.1.path1;Name=FBgn0039150.1;Dir=sensecoverage=40.5;identity=92.8;matches=589;mismatches=31;indels=15;unknowns=0;locus=RLOC_00022960
Chr2	stalkie_big_nohaplotig	exon	154165705	154165935	100	-	.	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1597 1827 +
Chr2	stalkie_big_nohaplotig	exon	154166011	154166118	99	-	.	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1489 1596 +
Chr2	stalkie_big_nohaplotig	exon	154166174	154166226	100	-	.	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1436 1488 +
Chr2	stalkie_big_nohaplotig	exon	154187947	154187955	100	-	.	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1398 1406 +
Chr2	stalkie_big_nohaplotig	exon	154253110	154253114	100	-	.	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1339 1343 +
Chr2	stalkie_big_nohaplotig	exon	154260245	154260251	100	-	.	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1332 1338 +
Chr2	stalkie_big_nohaplotig	exon	154265452	154265462	100	-	.	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1321 1331 +
Chr2	stalkie_big_nohaplotig	exon	154268500	154268502	100	-	.	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1318 1320 +
Chr2	stalkie_big_nohaplotig	exon	154271327	154271393	58	-	.	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1256 1317 +
Chr2	stalkie_big_nohaplotig	exon	154274993	154274995	100	-	.	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1253 1255 +
Chr2	stalkie_big_nohaplotig	exon	154281893	154281901	100	-	.	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1244 1252 +
Chr2	stalkie_big_nohaplotig	exon	154282276	154282286	100	-	.	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1233 1243 +
Chr2	stalkie_big_nohaplotig	exon	154288885	154288896	75	-	.	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1221 1232 +
Chr2	stalkie_big_nohaplotig	exon	154289573	154289579	100	-	.	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1214 1220 +
Chr2	stalkie_big_nohaplotig	exon	154298772	154298778	100	-	.	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1207 1213 +
Chr2	stalkie_big_nohaplotig	exon	154301189	154301191	100	-	.	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1204 1206 +
Chr2	stalkie_big_nohaplotig	exon	154301673	154301684	83	-	.	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1192 1203 +
Chr2	stalkie_big_nohaplotig	exon	154315132	154315139	100	-	.	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1179 1186 +
Chr2	stalkie_big_nohaplotig	exon	154315171	154315184	100	-	.	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1133 1146 +
Chr2	stalkie_big_nohaplotig	exon	154322653	154322661	88	-	.	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1124 1132 +
Chr2	stalkie_big_nohaplotig	exon	154324708	154324733	65	-	.	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1103 1121 +
Chr2	stalkie_big_nohaplotig	exon	154327092	154327107	87	-	.	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1088 1102 +
Chr2	stalkie_big_nohaplotig	CDS	154165705	154165935	.	-	0	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1597 1827 +
Chr2	stalkie_big_nohaplotig	CDS	154166011	154166118	.	-	0	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1489 1596 +
Chr2	stalkie_big_nohaplotig	CDS	154166174	154166209	.	-	0	Parent=FBgn0039150.1.mrna1;Target=FBgn0039150.1 1453 1488 +
Chr2	stalkie_big_nohaplotig	mRNA	154254780	154260728	.	-	.	ID=FBgn0003308.1.mrna1;geneID=FBgn0003308.1.path1;Name=FBgn0003308.1;Dir=sensecoverage=100.0;identity=99.0;matches=4067;mismatches=40;indels=0;unknowns=0;locus=RLOC_00022960
Chr2	stalkie_big_nohaplotig	exon	154254780	154254827	100	-	.	Parent=FBgn0003308.1.mrna1;Target=FBgn0003308.1 4060 4107 +
Chr2	stalkie_big_nohaplotig	exon	154254889	154255056	98	-	.	Parent=FBgn0003308.1.mrna1;Target=FBgn0003308.1 3892 4059 +
Chr2	stalkie_big_nohaplotig	exon	154255113	154255989	98	-	.	Parent=FBgn0003308.1.mrna1;Target=FBgn0003308.1 3015 3891 +
Chr2	stalkie_big_nohaplotig	exon	154256048	154256316	99	-	.	Parent=FBgn0003308.1.mrna1;Target=FBgn0003308.1 2746 3014 +
Chr2	stalkie_big_nohaplotig	exon	154256388	154259012	98	-	.	Parent=FBgn0003308.1.mrna1;Target=FBgn0003308.1 121 2745 +
Chr2	stalkie_big_nohaplotig	exon	154260609	154260728	100	-	.	Parent=FBgn0003308.1.mrna1;Target=FBgn0003308.1 1 120 +
Chr2	stalkie_big_nohaplotig	CDS	154254780	154254827	.	-	0	Parent=FBgn0003308.1.mrna1;Target=FBgn0003308.1 4060 4107 +
Chr2	stalkie_big_nohaplotig	CDS	154254889	154255056	.	-	0	Parent=FBgn0003308.1.mrna1;Target=FBgn0003308.1 3892 4059 +
Chr2	stalkie_big_nohaplotig	CDS	154255113	154255989	.	-	1	Parent=FBgn0003308.1.mrna1;Target=FBgn0003308.1 3015 3891 +
Chr2	stalkie_big_nohaplotig	CDS	154256048	154256316	.	-	0	Parent=FBgn0003308.1.mrna1;Target=FBgn0003308.1 2746 3014 +
Chr2	stalkie_big_nohaplotig	CDS	154256388	154259012	.	-	0	Parent=FBgn0003308.1.mrna1;Target=FBgn0003308.1 121 2745 +
Chr2	stalkie_big_nohaplotig	CDS	154260609	154260728	.	-	0	Parent=FBgn0003308.1.mrna1;Target=FBgn0003308.1 1 120 +
Chr2	stalkie_big_nohaplotig	mRNA	154254780	154268558	.	-	.	ID=FBgn0003308.2.mrna2;geneID=FBgn0003308.2.path2;Name=FBgn0003308.2;Dir=sensecoverage=97.1;identity=98.8;matches=3941;mismatches=46;indels=0;unknowns=0;locus=RLOC_00022960
Chr2	stalkie_big_nohaplotig	exon	154254780	154254827	100	-	.	Parent=FBgn0003308.2.mrna2;Target=FBgn0003308.2 4060 4107 +
Chr2	stalkie_big_nohaplotig	exon	154254889	154255056	98	-	.	Parent=FBgn0003308.2.mrna2;Target=FBgn0003308.2 3892 4059 +
Chr2	stalkie_big_nohaplotig	exon	154255113	154255477	98	-	.	Parent=FBgn0003308.2.mrna2;Target=FBgn0003308.2 3527 3891 +
Chr2	stalkie_big_nohaplotig	exon	154264877	154265388	98	-	.	Parent=FBgn0003308.2.mrna2;Target=FBgn0003308.2 3015 3526 +
Chr2	stalkie_big_nohaplotig	exon	154265604	154265872	100	-	.	Parent=FBgn0003308.2.mrna2;Target=FBgn0003308.2 2746 3014 +
Chr2	stalkie_big_nohaplotig	exon	154265934	154268558	98	-	.	Parent=FBgn0003308.2.mrna2;Target=FBgn0003308.2 121 2745 +
Chr2	stalkie_big_nohaplotig	CDS	154254780	154254827	.	-	0	Parent=FBgn0003308.2.mrna2;Target=FBgn0003308.2 4060 4107 +
Chr2	stalkie_big_nohaplotig	CDS	154254889	154255056	.	-	0	Parent=FBgn0003308.2.mrna2;Target=FBgn0003308.2 3892 4059 +
Chr2	stalkie_big_nohaplotig	CDS	154255113	154255477	.	-	2	Parent=FBgn0003308.2.mrna2;Target=FBgn0003308.2 3527 3891 +
Chr2	stalkie_big_nohaplotig	CDS	154264877	154265388	.	-	1	Parent=FBgn0003308.2.mrna2;Target=FBgn0003308.2 3015 3526 +
Chr2	stalkie_big_nohaplotig	CDS	154265604	154265872	.	-	0	Parent=FBgn0003308.2.mrna2;Target=FBgn0003308.2 2746 3014 +
Chr2	stalkie_big_nohaplotig	CDS	154265934	154268558	.	-	0	Parent=FBgn0003308.2.mrna2;Target=FBgn0003308.2 121 2745 +
Chr2	gffcl	locus	154228201	154228647	.	-	.	ID=RLOC_00022962;geneIDs=FBgn0038678.1.path1;transcripts=FBgn0038678.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154228201	154228647	.	-	.	ID=FBgn0038678.1.mrna1;geneID=FBgn0038678.1.path1;Name=FBgn0038678.1;Dir=sensecoverage=100.0;identity=99.2;matches=387;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022962
Chr2	stalkie_big_nohaplotig	exon	154228201	154228344	100	-	.	Parent=FBgn0038678.1.mrna1;Target=FBgn0038678.1 247 390 +
Chr2	stalkie_big_nohaplotig	exon	154228402	154228647	98	-	.	Parent=FBgn0038678.1.mrna1;Target=FBgn0038678.1 1 246 +
Chr2	stalkie_big_nohaplotig	CDS	154228201	154228344	.	-	0	Parent=FBgn0038678.1.mrna1;Target=FBgn0038678.1 247 390 +
Chr2	stalkie_big_nohaplotig	CDS	154228402	154228647	.	-	0	Parent=FBgn0038678.1.mrna1;Target=FBgn0038678.1 1 246 +
Chr2	gffcl	locus	154229246	154229718	.	+	.	ID=RLOC_00022963;geneIDs=FBgn0016120.2.path1;transcripts=FBgn0016120.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154229246	154229718	.	+	.	ID=FBgn0016120.2.mrna1;geneID=FBgn0016120.2.path1;Name=FBgn0016120.2;Dir=indeterminatecoverage=100.0;identity=99.2;matches=470;mismatches=3;indels=1;unknowns=0;Target=FBgn0016120.2 474 1 .;CDS_Target=FBgn0016120.2 53 3 .;locus=RLOC_00022963
Chr2	stalkie_big_nohaplotig	exon	154229246	154229718	99	+	.	Parent=FBgn0016120.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	154229248	154229297	.	+	0	Parent=FBgn0016120.2.mrna1
Chr2	gffcl	locus	154231172	154252964	.	+	.	ID=RLOC_00022964;geneIDs=FBgn0039045.1.path1,comp159904_c0_seq1.path1;transcripts=comp159904_c0_seq1.mrna1,FBgn0039045.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154231172	154252964	.	+	.	ID=comp159904_c0_seq1.mrna1;geneID=comp159904_c0_seq1.path1;Name=comp159904_c0_seq1;Dir=antisensecoverage=100.0;identity=99.4;matches=1972;mismatches=12;indels=0;unknowns=0;locus=RLOC_00022964
Chr2	stalkie_big_nohaplotig	exon	154231172	154231195	100	+	.	Parent=comp159904_c0_seq1.mrna1;Target=comp159904_c0_seq1 1961 1984 -
Chr2	stalkie_big_nohaplotig	exon	154233504	154233719	99	+	.	Parent=comp159904_c0_seq1.mrna1;Target=comp159904_c0_seq1 1745 1960 -
Chr2	stalkie_big_nohaplotig	exon	154247650	154247814	99	+	.	Parent=comp159904_c0_seq1.mrna1;Target=comp159904_c0_seq1 1580 1744 -
Chr2	stalkie_big_nohaplotig	exon	154247878	154247983	99	+	.	Parent=comp159904_c0_seq1.mrna1;Target=comp159904_c0_seq1 1474 1579 -
Chr2	stalkie_big_nohaplotig	exon	154248755	154248940	100	+	.	Parent=comp159904_c0_seq1.mrna1;Target=comp159904_c0_seq1 1288 1473 -
Chr2	stalkie_big_nohaplotig	exon	154248997	154249357	99	+	.	Parent=comp159904_c0_seq1.mrna1;Target=comp159904_c0_seq1 927 1287 -
Chr2	stalkie_big_nohaplotig	exon	154249594	154249764	98	+	.	Parent=comp159904_c0_seq1.mrna1;Target=comp159904_c0_seq1 756 926 -
Chr2	stalkie_big_nohaplotig	exon	154249824	154249941	100	+	.	Parent=comp159904_c0_seq1.mrna1;Target=comp159904_c0_seq1 638 755 -
Chr2	stalkie_big_nohaplotig	exon	154250007	154250109	99	+	.	Parent=comp159904_c0_seq1.mrna1;Target=comp159904_c0_seq1 535 637 -
Chr2	stalkie_big_nohaplotig	exon	154250238	154250686	99	+	.	Parent=comp159904_c0_seq1.mrna1;Target=comp159904_c0_seq1 86 534 -
Chr2	stalkie_big_nohaplotig	exon	154252880	154252964	100	+	.	Parent=comp159904_c0_seq1.mrna1;Target=comp159904_c0_seq1 1 85 -
Chr2	stalkie_big_nohaplotig	CDS	154247748	154247814	.	+	0	Parent=comp159904_c0_seq1.mrna1;Target=comp159904_c0_seq1 1580 1646 .
Chr2	stalkie_big_nohaplotig	CDS	154247878	154247983	.	+	2	Parent=comp159904_c0_seq1.mrna1;Target=comp159904_c0_seq1 1474 1579 .
Chr2	stalkie_big_nohaplotig	CDS	154248755	154248940	.	+	1	Parent=comp159904_c0_seq1.mrna1;Target=comp159904_c0_seq1 1288 1473 .
Chr2	stalkie_big_nohaplotig	CDS	154248997	154249357	.	+	1	Parent=comp159904_c0_seq1.mrna1;Target=comp159904_c0_seq1 927 1287 .
Chr2	stalkie_big_nohaplotig	CDS	154249594	154249764	.	+	0	Parent=comp159904_c0_seq1.mrna1;Target=comp159904_c0_seq1 756 926 .
Chr2	stalkie_big_nohaplotig	CDS	154249824	154249941	.	+	0	Parent=comp159904_c0_seq1.mrna1;Target=comp159904_c0_seq1 638 755 .
Chr2	stalkie_big_nohaplotig	CDS	154250007	154250109	.	+	2	Parent=comp159904_c0_seq1.mrna1;Target=comp159904_c0_seq1 535 637 .
Chr2	stalkie_big_nohaplotig	CDS	154250238	154250295	.	+	1	Parent=comp159904_c0_seq1.mrna1;Target=comp159904_c0_seq1 477 534 .
Chr2	stalkie_big_nohaplotig	mRNA	154247706	154250655	.	+	.	ID=FBgn0039045.1.mrna1;geneID=FBgn0039045.1.path1;Name=FBgn0039045.1;Dir=sensecoverage=100.0;identity=99.4;matches=1234;mismatches=8;indels=0;unknowns=0;locus=RLOC_00022964
Chr2	stalkie_big_nohaplotig	exon	154247706	154247814	100	+	.	Parent=FBgn0039045.1.mrna1;Target=FBgn0039045.1 1 109 +
Chr2	stalkie_big_nohaplotig	exon	154247878	154247983	99	+	.	Parent=FBgn0039045.1.mrna1;Target=FBgn0039045.1 110 215 +
Chr2	stalkie_big_nohaplotig	exon	154248755	154248940	100	+	.	Parent=FBgn0039045.1.mrna1;Target=FBgn0039045.1 216 401 +
Chr2	stalkie_big_nohaplotig	exon	154248997	154249357	99	+	.	Parent=FBgn0039045.1.mrna1;Target=FBgn0039045.1 402 762 +
Chr2	stalkie_big_nohaplotig	exon	154249594	154249764	98	+	.	Parent=FBgn0039045.1.mrna1;Target=FBgn0039045.1 763 933 +
Chr2	stalkie_big_nohaplotig	exon	154249824	154249941	100	+	.	Parent=FBgn0039045.1.mrna1;Target=FBgn0039045.1 934 1051 +
Chr2	stalkie_big_nohaplotig	exon	154250007	154250109	99	+	.	Parent=FBgn0039045.1.mrna1;Target=FBgn0039045.1 1052 1154 +
Chr2	stalkie_big_nohaplotig	exon	154250568	154250655	98	+	.	Parent=FBgn0039045.1.mrna1;Target=FBgn0039045.1 1155 1242 +
Chr2	stalkie_big_nohaplotig	CDS	154247706	154247814	.	+	0	Parent=FBgn0039045.1.mrna1;Target=FBgn0039045.1 1 109 +
Chr2	stalkie_big_nohaplotig	CDS	154247878	154247983	.	+	2	Parent=FBgn0039045.1.mrna1;Target=FBgn0039045.1 110 215 +
Chr2	stalkie_big_nohaplotig	CDS	154248755	154248940	.	+	1	Parent=FBgn0039045.1.mrna1;Target=FBgn0039045.1 216 401 +
Chr2	stalkie_big_nohaplotig	CDS	154248997	154249357	.	+	1	Parent=FBgn0039045.1.mrna1;Target=FBgn0039045.1 402 762 +
Chr2	stalkie_big_nohaplotig	CDS	154249594	154249764	.	+	0	Parent=FBgn0039045.1.mrna1;Target=FBgn0039045.1 763 933 +
Chr2	stalkie_big_nohaplotig	CDS	154249824	154249941	.	+	0	Parent=FBgn0039045.1.mrna1;Target=FBgn0039045.1 934 1051 +
Chr2	stalkie_big_nohaplotig	CDS	154250007	154250109	.	+	2	Parent=FBgn0039045.1.mrna1;Target=FBgn0039045.1 1052 1154 +
Chr2	stalkie_big_nohaplotig	CDS	154250568	154250655	.	+	1	Parent=FBgn0039045.1.mrna1;Target=FBgn0039045.1 1155 1242 +
Chr2	gffcl	locus	154231273	154233058	.	+	.	ID=RLOC_00022965;geneIDs=FBgn0053193.1.path1;transcripts=FBgn0053193.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154231273	154233058	.	+	.	ID=FBgn0053193.1.mrna1;geneID=FBgn0053193.1.path1;Name=FBgn0053193.1;Dir=sensecoverage=100.0;identity=99.6;matches=1551;mismatches=6;indels=0;unknowns=0;locus=RLOC_00022965
Chr2	stalkie_big_nohaplotig	exon	154231273	154232418	99	+	.	Parent=FBgn0053193.1.mrna1;Target=FBgn0053193.1 1 1146 +
Chr2	stalkie_big_nohaplotig	exon	154232587	154232915	99	+	.	Parent=FBgn0053193.1.mrna1;Target=FBgn0053193.1 1147 1475 +
Chr2	stalkie_big_nohaplotig	exon	154232977	154233058	97	+	.	Parent=FBgn0053193.1.mrna1;Target=FBgn0053193.1 1476 1557 +
Chr2	stalkie_big_nohaplotig	CDS	154231273	154232418	.	+	0	Parent=FBgn0053193.1.mrna1;Target=FBgn0053193.1 1 1146 +
Chr2	stalkie_big_nohaplotig	CDS	154232587	154232915	.	+	0	Parent=FBgn0053193.1.mrna1;Target=FBgn0053193.1 1147 1475 +
Chr2	stalkie_big_nohaplotig	CDS	154232977	154233058	.	+	1	Parent=FBgn0053193.1.mrna1;Target=FBgn0053193.1 1476 1557 +
Chr2	gffcl	locus	154233826	154234233	.	-	.	ID=RLOC_00022966;geneIDs=comp146299_c0_seq1.path1;transcripts=comp146299_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154233826	154234233	.	-	.	ID=comp146299_c0_seq1.mrna1;geneID=comp146299_c0_seq1.path1;Name=comp146299_c0_seq1;Dir=indeterminatecoverage=58.8;identity=98.8;matches=403;mismatches=5;indels=0;unknowns=0;Target=comp146299_c0_seq1 694 287 .;CDS_Target=comp146299_c0_seq1 359 288 .;locus=RLOC_00022966
Chr2	stalkie_big_nohaplotig	exon	154233826	154234233	98	-	.	Parent=comp146299_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	154234161	154234232	.	-	0	Parent=comp146299_c0_seq1.mrna1
Chr2	gffcl	locus	154236449	154236911	.	+	.	ID=RLOC_00022967;geneIDs=comp116210_c0_seq1.path1;transcripts=comp116210_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154236449	154236911	.	+	.	ID=comp116210_c0_seq1.mrna1;geneID=comp116210_c0_seq1.path1;Name=comp116210_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=457;mismatches=5;indels=1;unknowns=0;Target=comp116210_c0_seq1 462 1 .;CDS_Target=comp116210_c0_seq1 121 2 .;locus=RLOC_00022967
Chr2	stalkie_big_nohaplotig	exon	154236449	154236911	98	+	.	Parent=comp116210_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	154236450	154236569	.	+	0	Parent=comp116210_c0_seq1.mrna1
Chr2	gffcl	locus	154262930	154352604	.	+	.	ID=RLOC_00022968;geneIDs=FBgn0004876.1.path2,comp159040_c1_seq1.path2;transcripts=FBgn0004876.1.mrna2,comp159040_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	154262930	154351422	.	+	.	ID=FBgn0004876.1.mrna2;geneID=FBgn0004876.1.path2;Name=FBgn0004876.1;Dir=sensecoverage=84.5;identity=99.4;matches=2145;mismatches=11;indels=1;unknowns=0;locus=RLOC_00022968
Chr2	stalkie_big_nohaplotig	exon	154262930	154262935	100	+	.	Parent=FBgn0004876.1.mrna2;Target=FBgn0004876.1 399 404 +
Chr2	stalkie_big_nohaplotig	exon	154277879	154277882	100	+	.	Parent=FBgn0004876.1.mrna2;Target=FBgn0004876.1 405 408 +
Chr2	stalkie_big_nohaplotig	exon	154289887	154289889	100	+	.	Parent=FBgn0004876.1.mrna2;Target=FBgn0004876.1 409 411 +
Chr2	stalkie_big_nohaplotig	exon	154296246	154296255	100	+	.	Parent=FBgn0004876.1.mrna2;Target=FBgn0004876.1 412 421 +
Chr2	stalkie_big_nohaplotig	exon	154297298	154297303	100	+	.	Parent=FBgn0004876.1.mrna2;Target=FBgn0004876.1 435 440 +
Chr2	stalkie_big_nohaplotig	exon	154300252	154300256	100	+	.	Parent=FBgn0004876.1.mrna2;Target=FBgn0004876.1 441 445 +
Chr2	stalkie_big_nohaplotig	exon	154314329	154314452	100	+	.	Parent=FBgn0004876.1.mrna2;Target=FBgn0004876.1 446 569 +
Chr2	stalkie_big_nohaplotig	exon	154349231	154349429	99	+	.	Parent=FBgn0004876.1.mrna2;Target=FBgn0004876.1 570 768 +
Chr2	stalkie_big_nohaplotig	exon	154349498	154349583	100	+	.	Parent=FBgn0004876.1.mrna2;Target=FBgn0004876.1 769 854 +
Chr2	stalkie_big_nohaplotig	exon	154349641	154349896	98	+	.	Parent=FBgn0004876.1.mrna2;Target=FBgn0004876.1 855 1110 +
Chr2	stalkie_big_nohaplotig	exon	154349966	154351422	99	+	.	Parent=FBgn0004876.1.mrna2;Target=FBgn0004876.1 1111 2568 +
Chr2	stalkie_big_nohaplotig	CDS	154314358	154314452	.	+	0	Parent=FBgn0004876.1.mrna2;Target=FBgn0004876.1 475 569 +
Chr2	stalkie_big_nohaplotig	CDS	154349231	154349429	.	+	1	Parent=FBgn0004876.1.mrna2;Target=FBgn0004876.1 570 768 +
Chr2	stalkie_big_nohaplotig	CDS	154349498	154349583	.	+	0	Parent=FBgn0004876.1.mrna2;Target=FBgn0004876.1 769 854 +
Chr2	stalkie_big_nohaplotig	CDS	154349641	154349896	.	+	1	Parent=FBgn0004876.1.mrna2;Target=FBgn0004876.1 855 1110 +
Chr2	stalkie_big_nohaplotig	CDS	154349966	154351422	.	+	0	Parent=FBgn0004876.1.mrna2;Target=FBgn0004876.1 1111 2568 +
Chr2	stalkie_big_nohaplotig	mRNA	154294885	154352604	.	+	.	ID=comp159040_c1_seq1.mrna2;geneID=comp159040_c1_seq1.path2;Name=comp159040_c1_seq1;Dir=sensecoverage=74.8;identity=98.9;matches=3229;mismatches=36;indels=1;unknowns=0;Target=comp159040_c1_seq1 4131 4340 +;locus=RLOC_00022968
Chr2	stalkie_big_nohaplotig	exon	154294885	154294927	41	+	.	Parent=comp159040_c1_seq1.mrna2;Target=comp159040_c1_seq1 1132 1174 +
Chr2	stalkie_big_nohaplotig	exon	154314332	154314452	100	+	.	Parent=comp159040_c1_seq1.mrna2;Target=comp159040_c1_seq1 1274 1394 +
Chr2	stalkie_big_nohaplotig	exon	154349231	154349429	99	+	.	Parent=comp159040_c1_seq1.mrna2;Target=comp159040_c1_seq1 1395 1593 +
Chr2	stalkie_big_nohaplotig	exon	154349498	154349583	100	+	.	Parent=comp159040_c1_seq1.mrna2;Target=comp159040_c1_seq1 1594 1679 +
Chr2	stalkie_big_nohaplotig	exon	154349641	154349896	98	+	.	Parent=comp159040_c1_seq1.mrna2;Target=comp159040_c1_seq1 1680 1935 +
Chr2	stalkie_big_nohaplotig	exon	154349966	154351671	99	+	.	Parent=comp159040_c1_seq1.mrna2;Target=comp159040_c1_seq1 1936 3642 +
Chr2	stalkie_big_nohaplotig	exon	154351752	154352604	100	+	.	Parent=comp159040_c1_seq1.mrna2;Target=comp159040_c1_seq1 3643 4495 +
Chr2	stalkie_big_nohaplotig	CDS	154352240	154352449	.	+	2	Parent=comp159040_c1_seq1.mrna2
Chr2	gffcl	locus	154354381	154354810	.	-	.	ID=RLOC_00022969;geneIDs=comp143150_c0_seq1.path1;transcripts=comp143150_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154354381	154354810	.	-	.	ID=comp143150_c0_seq1.mrna1;geneID=comp143150_c0_seq1.path1;Name=comp143150_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=429;mismatches=1;indels=0;unknowns=0;Target=comp143150_c0_seq1 430 1 .;CDS_Target=comp143150_c0_seq1 130 2 .;locus=RLOC_00022969
Chr2	stalkie_big_nohaplotig	exon	154354381	154354810	99	-	.	Parent=comp143150_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	154354681	154354809	.	-	0	Parent=comp143150_c0_seq1.mrna1
Chr2	gffcl	locus	154365676	154366935	.	+	.	ID=RLOC_00022970;geneIDs=comp118098_c0_seq1.path1;transcripts=comp118098_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154365676	154366935	.	+	.	ID=comp118098_c0_seq1.mrna1;geneID=comp118098_c0_seq1.path1;Name=comp118098_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=795;mismatches=1;indels=0;unknowns=0;Target=comp118098_c0_seq1 229 330 +;locus=RLOC_00022970
Chr2	stalkie_big_nohaplotig	exon	154365676	154365885	99	+	.	Parent=comp118098_c0_seq1.mrna1;Target=comp118098_c0_seq1 1 210 +
Chr2	stalkie_big_nohaplotig	exon	154366141	154366608	100	+	.	Parent=comp118098_c0_seq1.mrna1;Target=comp118098_c0_seq1 211 678 +
Chr2	stalkie_big_nohaplotig	exon	154366712	154366811	100	+	.	Parent=comp118098_c0_seq1.mrna1;Target=comp118098_c0_seq1 679 778 +
Chr2	stalkie_big_nohaplotig	exon	154366918	154366935	100	+	.	Parent=comp118098_c0_seq1.mrna1;Target=comp118098_c0_seq1 779 796 +
Chr2	stalkie_big_nohaplotig	CDS	154366159	154366260	.	+	0	Parent=comp118098_c0_seq1.mrna1
Chr2	gffcl	locus	154416121	154417167	.	-	.	ID=RLOC_00022971;geneIDs=FBgn0038675.1.path1;transcripts=FBgn0038675.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154416121	154417167	.	-	.	ID=FBgn0038675.1.mrna1;geneID=FBgn0038675.1.path1;Name=FBgn0038675.1;Dir=sensecoverage=100.0;identity=99.0;matches=609;mismatches=5;indels=1;unknowns=0;Target=FBgn0038675.1 3 80 +;locus=RLOC_00022971
Chr2	stalkie_big_nohaplotig	exon	154416121	154416301	98	-	.	Parent=FBgn0038675.1.mrna1;Target=FBgn0038675.1 435 615 +
Chr2	stalkie_big_nohaplotig	exon	154416735	154417167	99	-	.	Parent=FBgn0038675.1.mrna1;Target=FBgn0038675.1 1 434 +
Chr2	stalkie_big_nohaplotig	CDS	154417089	154417165	.	-	0	Parent=FBgn0038675.1.mrna1
Chr2	gffcl	locus	154417489	154418519	.	+	.	ID=RLOC_00022972;geneIDs=FBgn0027784.1.path1;transcripts=FBgn0027784.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154417489	154418519	.	+	.	ID=FBgn0027784.1.mrna1;geneID=FBgn0027784.1.path1;Name=FBgn0027784.1;Dir=indeterminatecoverage=99.9;identity=98.9;matches=1020;mismatches=11;indels=0;unknowns=0;Target=FBgn0027784.1 1032 2 .;CDS_Target=FBgn0027784.1 1032 4 .;locus=RLOC_00022972
Chr2	stalkie_big_nohaplotig	exon	154417489	154418519	98	+	.	Parent=FBgn0027784.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	154417491	154418519	.	+	0	Parent=FBgn0027784.1.mrna1
Chr2	gffcl	locus	154418656	154419725	.	-	.	ID=RLOC_00022973;geneIDs=FBgn0015781.1.path1;transcripts=FBgn0015781.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154418656	154419725	.	-	.	ID=FBgn0015781.1.mrna1;geneID=FBgn0015781.1.path1;Name=FBgn0015781.1;Dir=sensecoverage=100.0;identity=98.5;matches=881;mismatches=13;indels=0;unknowns=0;locus=RLOC_00022973
Chr2	stalkie_big_nohaplotig	exon	154418656	154418716	98	-	.	Parent=FBgn0015781.1.mrna1;Target=FBgn0015781.1 834 894 +
Chr2	stalkie_big_nohaplotig	exon	154418771	154418832	98	-	.	Parent=FBgn0015781.1.mrna1;Target=FBgn0015781.1 772 833 +
Chr2	stalkie_big_nohaplotig	exon	154418894	154419262	99	-	.	Parent=FBgn0015781.1.mrna1;Target=FBgn0015781.1 403 771 +
Chr2	stalkie_big_nohaplotig	exon	154419324	154419725	98	-	.	Parent=FBgn0015781.1.mrna1;Target=FBgn0015781.1 1 402 +
Chr2	stalkie_big_nohaplotig	CDS	154418656	154418716	.	-	1	Parent=FBgn0015781.1.mrna1;Target=FBgn0015781.1 834 894 +
Chr2	stalkie_big_nohaplotig	CDS	154418771	154418832	.	-	0	Parent=FBgn0015781.1.mrna1;Target=FBgn0015781.1 772 833 +
Chr2	stalkie_big_nohaplotig	CDS	154418894	154419262	.	-	0	Parent=FBgn0015781.1.mrna1;Target=FBgn0015781.1 403 771 +
Chr2	stalkie_big_nohaplotig	CDS	154419324	154419725	.	-	0	Parent=FBgn0015781.1.mrna1;Target=FBgn0015781.1 1 402 +
Chr2	gffcl	locus	154451533	154456399	.	-	.	ID=RLOC_00022975;geneIDs=comp155616_c0_seq1.path1;transcripts=comp155616_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154451533	154456399	.	-	.	ID=comp155616_c0_seq1.mrna1;geneID=comp155616_c0_seq1.path1;Name=comp155616_c0_seq1;Dir=antisensecoverage=99.5;identity=94.5;matches=623;mismatches=24;indels=12;unknowns=0;Target=comp155616_c0_seq1 112 135 .;locus=RLOC_00022975
Chr2	stalkie_big_nohaplotig	exon	154451533	154451917	95	-	.	Parent=comp155616_c0_seq1.mrna1;Target=comp155616_c0_seq1 3 387 -
Chr2	stalkie_big_nohaplotig	exon	154452833	154452969	96	-	.	Parent=comp155616_c0_seq1.mrna1;Target=comp155616_c0_seq1 388 524 -
Chr2	stalkie_big_nohaplotig	exon	154456264	154456399	89	-	.	Parent=comp155616_c0_seq1.mrna1;Target=comp155616_c0_seq1 525 650 -
Chr2	stalkie_big_nohaplotig	CDS	154451642	154451665	.	-	0	Parent=comp155616_c0_seq1.mrna1
Chr2	gffcl	locus	154488759	154490047	.	+	.	ID=RLOC_00022976;geneIDs=CPIJ003712.1.path1;transcripts=CPIJ003712.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154488759	154490047	.	+	.	ID=CPIJ003712.1.mrna1;geneID=CPIJ003712.1.path1;Name=CPIJ003712.1;Dir=sensecoverage=100.0;identity=99.2;matches=1077;mismatches=9;indels=0;unknowns=0;locus=RLOC_00022976
Chr2	stalkie_big_nohaplotig	exon	154488759	154489266	99	+	.	Parent=CPIJ003712.1.mrna1;Target=CPIJ003712.1 1 508 +
Chr2	stalkie_big_nohaplotig	exon	154489329	154489476	100	+	.	Parent=CPIJ003712.1.mrna1;Target=CPIJ003712.1 509 656 +
Chr2	stalkie_big_nohaplotig	exon	154489549	154489750	99	+	.	Parent=CPIJ003712.1.mrna1;Target=CPIJ003712.1 657 858 +
Chr2	stalkie_big_nohaplotig	exon	154489820	154490047	97	+	.	Parent=CPIJ003712.1.mrna1;Target=CPIJ003712.1 859 1086 +
Chr2	stalkie_big_nohaplotig	CDS	154488759	154489266	.	+	0	Parent=CPIJ003712.1.mrna1;Target=CPIJ003712.1 1 508 +
Chr2	stalkie_big_nohaplotig	CDS	154489329	154489476	.	+	2	Parent=CPIJ003712.1.mrna1;Target=CPIJ003712.1 509 656 +
Chr2	stalkie_big_nohaplotig	CDS	154489549	154489750	.	+	1	Parent=CPIJ003712.1.mrna1;Target=CPIJ003712.1 657 858 +
Chr2	stalkie_big_nohaplotig	CDS	154489820	154490047	.	+	0	Parent=CPIJ003712.1.mrna1;Target=CPIJ003712.1 859 1086 +
Chr2	gffcl	locus	154595673	154616623	.	+	.	ID=RLOC_00022977;geneIDs=FBgn0039709.path1;transcripts=FBgn0039709.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154595673	154616623	.	+	.	ID=FBgn0039709.mrna1;geneID=FBgn0039709.path1;Name=FBgn0039709;Dir=sensecoverage=13.4;identity=100.0;matches=387;mismatches=0;indels=0;unknowns=0;locus=RLOC_00022977
Chr2	stalkie_big_nohaplotig	exon	154595673	154595689	100	+	.	Parent=FBgn0039709.mrna1;Target=FBgn0039709 1 17 +
Chr2	stalkie_big_nohaplotig	exon	154596111	154596140	100	+	.	Parent=FBgn0039709.mrna1;Target=FBgn0039709 18 47 +
Chr2	stalkie_big_nohaplotig	exon	154604032	154604125	100	+	.	Parent=FBgn0039709.mrna1;Target=FBgn0039709 48 141 +
Chr2	stalkie_big_nohaplotig	exon	154614157	154614336	100	+	.	Parent=FBgn0039709.mrna1;Target=FBgn0039709 142 321 +
Chr2	stalkie_big_nohaplotig	exon	154616558	154616623	100	+	.	Parent=FBgn0039709.mrna1;Target=FBgn0039709 322 387 +
Chr2	stalkie_big_nohaplotig	CDS	154595673	154595689	.	+	0	Parent=FBgn0039709.mrna1;Target=FBgn0039709 1 17 +
Chr2	stalkie_big_nohaplotig	CDS	154596111	154596140	.	+	1	Parent=FBgn0039709.mrna1;Target=FBgn0039709 18 47 +
Chr2	stalkie_big_nohaplotig	CDS	154604032	154604125	.	+	1	Parent=FBgn0039709.mrna1;Target=FBgn0039709 48 141 +
Chr2	stalkie_big_nohaplotig	CDS	154614157	154614336	.	+	0	Parent=FBgn0039709.mrna1;Target=FBgn0039709 142 321 +
Chr2	stalkie_big_nohaplotig	CDS	154616558	154616623	.	+	0	Parent=FBgn0039709.mrna1;Target=FBgn0039709 322 387 +
Chr2	gffcl	locus	154656942	154658213	.	-	.	ID=RLOC_00022978;geneIDs=comp113816_c0_seq1.path1;transcripts=comp113816_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154656942	154658213	.	-	.	ID=comp113816_c0_seq1.mrna1;geneID=comp113816_c0_seq1.path1;Name=comp113816_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1268;mismatches=4;indels=0;unknowns=0;Target=comp113816_c0_seq1 1272 1 .;CDS_Target=comp113816_c0_seq1 731 537 .;locus=RLOC_00022978
Chr2	stalkie_big_nohaplotig	exon	154656942	154658213	99	-	.	Parent=comp113816_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	154657483	154657677	.	-	0	Parent=comp113816_c0_seq1.mrna1
Chr2	gffcl	locus	154663446	154668542	.	+	.	ID=RLOC_00022979;geneIDs=comp152636_c5_seq1.path1;transcripts=comp152636_c5_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154663446	154668542	.	+	.	ID=comp152636_c5_seq1.mrna1;geneID=comp152636_c5_seq1.path1;Name=comp152636_c5_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=2231;mismatches=0;indels=2;unknowns=0;locus=RLOC_00022979
Chr2	stalkie_big_nohaplotig	exon	154663446	154663991	99	+	.	Parent=comp152636_c5_seq1.mrna1;Target=comp152636_c5_seq1 1686 2233 -
Chr2	stalkie_big_nohaplotig	exon	154664065	154664598	100	+	.	Parent=comp152636_c5_seq1.mrna1;Target=comp152636_c5_seq1 1152 1685 -
Chr2	stalkie_big_nohaplotig	exon	154666697	154667185	100	+	.	Parent=comp152636_c5_seq1.mrna1;Target=comp152636_c5_seq1 663 1151 -
Chr2	stalkie_big_nohaplotig	exon	154667819	154667999	100	+	.	Parent=comp152636_c5_seq1.mrna1;Target=comp152636_c5_seq1 482 662 -
Chr2	stalkie_big_nohaplotig	exon	154668062	154668542	100	+	.	Parent=comp152636_c5_seq1.mrna1;Target=comp152636_c5_seq1 1 481 -
Chr2	stalkie_big_nohaplotig	CDS	154663973	154663991	.	+	0	Parent=comp152636_c5_seq1.mrna1;Target=comp152636_c5_seq1 1686 1704 .
Chr2	stalkie_big_nohaplotig	CDS	154664065	154664252	.	+	2	Parent=comp152636_c5_seq1.mrna1;Target=comp152636_c5_seq1 1498 1685 .
Chr2	gffcl	locus	154726276	154727427	.	+	.	ID=RLOC_00022981;geneIDs=comp161897_c0_seq1.path2;transcripts=comp161897_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	154726276	154727427	.	+	.	ID=comp161897_c0_seq1.mrna2;geneID=comp161897_c0_seq1.path2;Name=comp161897_c0_seq1;Dir=indeterminatecoverage=97.6;identity=99.0;matches=1141;mismatches=11;indels=0;unknowns=0;Target=comp161897_c0_seq1 1180 29 .;CDS_Target=comp161897_c0_seq1 818 246 .;locus=RLOC_00022981
Chr2	stalkie_big_nohaplotig	exon	154726276	154727427	99	+	.	Parent=comp161897_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	154726493	154727065	.	+	0	Parent=comp161897_c0_seq1.mrna2
Chr2	gffcl	locus	154750148	154758695	.	-	.	ID=RLOC_00022983;geneIDs=comp147778_c0_seq1.path1;transcripts=comp147778_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154750148	154758695	.	-	.	ID=comp147778_c0_seq1.mrna1;geneID=comp147778_c0_seq1.path1;Name=comp147778_c0_seq1;Dir=antisensecoverage=100.0;identity=97.0;matches=1447;mismatches=17;indels=28;unknowns=0;locus=RLOC_00022983
Chr2	stalkie_big_nohaplotig	exon	154750148	154750768	95	-	.	Parent=comp147778_c0_seq1.mrna1;Target=comp147778_c0_seq1 1 646 -
Chr2	stalkie_big_nohaplotig	exon	154750836	154751018	98	-	.	Parent=comp147778_c0_seq1.mrna1;Target=comp147778_c0_seq1 647 829 -
Chr2	stalkie_big_nohaplotig	exon	154751094	154751242	97	-	.	Parent=comp147778_c0_seq1.mrna1;Target=comp147778_c0_seq1 830 978 -
Chr2	stalkie_big_nohaplotig	exon	154752477	154752592	99	-	.	Parent=comp147778_c0_seq1.mrna1;Target=comp147778_c0_seq1 979 1094 -
Chr2	stalkie_big_nohaplotig	exon	154758301	154758695	96	-	.	Parent=comp147778_c0_seq1.mrna1;Target=comp147778_c0_seq1 1095 1492 -
Chr2	stalkie_big_nohaplotig	CDS	154750630	154750768	.	-	1	Parent=comp147778_c0_seq1.mrna1;Target=comp147778_c0_seq1 508 646 .
Chr2	stalkie_big_nohaplotig	CDS	154750836	154751018	.	-	1	Parent=comp147778_c0_seq1.mrna1;Target=comp147778_c0_seq1 647 829 .
Chr2	stalkie_big_nohaplotig	CDS	154751094	154751242	.	-	0	Parent=comp147778_c0_seq1.mrna1;Target=comp147778_c0_seq1 830 978 .
Chr2	stalkie_big_nohaplotig	CDS	154752477	154752592	.	-	2	Parent=comp147778_c0_seq1.mrna1;Target=comp147778_c0_seq1 979 1094 .
Chr2	stalkie_big_nohaplotig	CDS	154758301	154758409	.	-	0	Parent=comp147778_c0_seq1.mrna1;Target=comp147778_c0_seq1 1095 1203 .
Chr2	gffcl	locus	154784970	154785722	.	-	.	ID=RLOC_00022984;geneIDs=ORF3232.path1;transcripts=ORF3232.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154784970	154785722	.	-	.	ID=ORF3232.mrna1;geneID=ORF3232.path1;Name=ORF3232;Dir=indeterminatecoverage=100.0;identity=100.0;matches=753;mismatches=0;indels=0;unknowns=0;Target=ORF3232 753 1 .;locus=RLOC_00022984
Chr2	stalkie_big_nohaplotig	exon	154784970	154785722	100	-	.	Parent=ORF3232.mrna1
Chr2	stalkie_big_nohaplotig	CDS	154784970	154785722	.	-	0	Parent=ORF3232.mrna1
Chr2	gffcl	locus	154794071	155612869	.	-	.	ID=RLOC_00022985;geneIDs=comp149944_c1_seq1.path1,comp155571_c1_seq1.path1;transcripts=comp155571_c1_seq1.mrna1,comp149944_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154794071	155612869	.	-	.	ID=comp155571_c1_seq1.mrna1;geneID=comp155571_c1_seq1.path1;Name=comp155571_c1_seq1;Dir=antisensecoverage=83.4;identity=85.4;matches=1016;mismatches=59;indels=114;unknowns=0;Target=comp155571_c1_seq1 586 594 .;locus=RLOC_00022985
Chr2	stalkie_big_nohaplotig	exon	154794071	154794456	94	-	.	Parent=comp155571_c1_seq1.mrna1;Target=comp155571_c1_seq1 2 382 -
Chr2	stalkie_big_nohaplotig	exon	154794537	154794801	73	-	.	Parent=comp155571_c1_seq1.mrna1;Target=comp155571_c1_seq1 383 701 -
Chr2	stalkie_big_nohaplotig	exon	154794859	154795044	95	-	.	Parent=comp155571_c1_seq1.mrna1;Target=comp155571_c1_seq1 702 887 -
Chr2	stalkie_big_nohaplotig	exon	154797431	154797596	96	-	.	Parent=comp155571_c1_seq1.mrna1;Target=comp155571_c1_seq1 888 1053 -
Chr2	stalkie_big_nohaplotig	exon	155590648	155590653	100	-	.	Parent=comp155571_c1_seq1.mrna1;Target=comp155571_c1_seq1 1054 1059 -
Chr2	stalkie_big_nohaplotig	exon	155599824	155599852	60	-	.	Parent=comp155571_c1_seq1.mrna1;Target=comp155571_c1_seq1 1060 1093 -
Chr2	stalkie_big_nohaplotig	exon	155600406	155600408	100	-	.	Parent=comp155571_c1_seq1.mrna1;Target=comp155571_c1_seq1 1094 1096 -
Chr2	stalkie_big_nohaplotig	exon	155606736	155606772	45	-	.	Parent=comp155571_c1_seq1.mrna1;Target=comp155571_c1_seq1 1097 1169 -
Chr2	stalkie_big_nohaplotig	exon	155612862	155612869	100	-	.	Parent=comp155571_c1_seq1.mrna1;Target=comp155571_c1_seq1 1173 1180 -
Chr2	stalkie_big_nohaplotig	CDS	154794687	154794694	.	-	0	Parent=comp155571_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155606686	155608074	.	-	.	ID=comp149944_c1_seq1.mrna1;geneID=comp149944_c1_seq1.path1;Name=comp149944_c1_seq1;Dir=antisensecoverage=98.0;identity=99.6;matches=907;mismatches=1;indels=3;unknowns=0;Target=comp149944_c1_seq1 21 134 .;locus=RLOC_00022985
Chr2	stalkie_big_nohaplotig	exon	155606686	155607224	100	-	.	Parent=comp149944_c1_seq1.mrna1;Target=comp149944_c1_seq1 20 558 -
Chr2	stalkie_big_nohaplotig	exon	155607706	155608074	98	-	.	Parent=comp149944_c1_seq1.mrna1;Target=comp149944_c1_seq1 559 930 -
Chr2	stalkie_big_nohaplotig	CDS	155606687	155606800	.	-	0	Parent=comp149944_c1_seq1.mrna1
Chr2	gffcl	locus	154835070	154835493	.	+	.	ID=RLOC_00022986;geneIDs=FBgn0261990.1.path1;transcripts=FBgn0261990.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154835070	154835493	.	+	.	ID=FBgn0261990.1.mrna1;geneID=FBgn0261990.1.path1;Name=FBgn0261990.1;Dir=indeterminatecoverage=98.8;identity=98.3;matches=417;mismatches=7;indels=0;unknowns=0;Target=FBgn0261990.1 429 6 .;CDS_Target=FBgn0261990.1 429 7 .;locus=RLOC_00022986
Chr2	stalkie_big_nohaplotig	exon	154835070	154835493	98	+	.	Parent=FBgn0261990.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	154835071	154835493	.	+	0	Parent=FBgn0261990.1.mrna1
Chr2	gffcl	locus	154841599	154842706	.	+	.	ID=RLOC_00022987;geneIDs=FBgn0261989.1.path1;transcripts=FBgn0261989.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154841599	154842706	.	+	.	ID=FBgn0261989.1.mrna1;geneID=FBgn0261989.1.path1;Name=FBgn0261989.1;Dir=sensecoverage=100.0;identity=99.3;matches=956;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022987
Chr2	stalkie_big_nohaplotig	exon	154841599	154841697	100	+	.	Parent=FBgn0261989.1.mrna1;Target=FBgn0261989.1 1 99 +
Chr2	stalkie_big_nohaplotig	exon	154841748	154842257	99	+	.	Parent=FBgn0261989.1.mrna1;Target=FBgn0261989.1 100 609 +
Chr2	stalkie_big_nohaplotig	exon	154842353	154842706	98	+	.	Parent=FBgn0261989.1.mrna1;Target=FBgn0261989.1 610 963 +
Chr2	stalkie_big_nohaplotig	CDS	154841599	154841697	.	+	0	Parent=FBgn0261989.1.mrna1;Target=FBgn0261989.1 1 99 +
Chr2	stalkie_big_nohaplotig	CDS	154841748	154842257	.	+	0	Parent=FBgn0261989.1.mrna1;Target=FBgn0261989.1 100 609 +
Chr2	stalkie_big_nohaplotig	CDS	154842353	154842706	.	+	0	Parent=FBgn0261989.1.mrna1;Target=FBgn0261989.1 610 963 +
Chr2	gffcl	locus	154846379	154847440	.	+	.	ID=RLOC_00022988;geneIDs=FBgn0261989.2.path1;transcripts=FBgn0261989.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154846379	154847440	.	+	.	ID=FBgn0261989.2.mrna1;geneID=FBgn0261989.2.path1;Name=FBgn0261989.2;Dir=sensecoverage=100.0;identity=99.2;matches=905;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022988
Chr2	stalkie_big_nohaplotig	exon	154846379	154846456	100	+	.	Parent=FBgn0261989.2.mrna1;Target=FBgn0261989.2 1 78 +
Chr2	stalkie_big_nohaplotig	exon	154846522	154847007	99	+	.	Parent=FBgn0261989.2.mrna1;Target=FBgn0261989.2 79 564 +
Chr2	stalkie_big_nohaplotig	exon	154847093	154847440	98	+	.	Parent=FBgn0261989.2.mrna1;Target=FBgn0261989.2 565 912 +
Chr2	stalkie_big_nohaplotig	CDS	154846379	154846456	.	+	0	Parent=FBgn0261989.2.mrna1;Target=FBgn0261989.2 1 78 +
Chr2	stalkie_big_nohaplotig	CDS	154846522	154847007	.	+	0	Parent=FBgn0261989.2.mrna1;Target=FBgn0261989.2 79 564 +
Chr2	stalkie_big_nohaplotig	CDS	154847093	154847440	.	+	0	Parent=FBgn0261989.2.mrna1;Target=FBgn0261989.2 565 912 +
Chr2	gffcl	locus	154848312	154849993	.	-	.	ID=RLOC_00022989;geneIDs=comp155770_c0_seq1.path1;transcripts=comp155770_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154848312	154849993	.	-	.	ID=comp155770_c0_seq1.mrna1;geneID=comp155770_c0_seq1.path1;Name=comp155770_c0_seq1;Dir=antisensecoverage=100.0;identity=97.1;matches=1537;mismatches=7;indels=39;unknowns=0;locus=RLOC_00022989
Chr2	stalkie_big_nohaplotig	exon	154848312	154848889	92	-	.	Parent=comp155770_c0_seq1.mrna1;Target=comp155770_c0_seq1 1 613 -
Chr2	stalkie_big_nohaplotig	exon	154848958	154849446	99	-	.	Parent=comp155770_c0_seq1.mrna1;Target=comp155770_c0_seq1 614 1102 -
Chr2	stalkie_big_nohaplotig	exon	154849515	154849993	100	-	.	Parent=comp155770_c0_seq1.mrna1;Target=comp155770_c0_seq1 1103 1581 -
Chr2	stalkie_big_nohaplotig	CDS	154848521	154848889	.	-	0	Parent=comp155770_c0_seq1.mrna1;Target=comp155770_c0_seq1 245 613 .
Chr2	stalkie_big_nohaplotig	CDS	154848958	154849446	.	-	0	Parent=comp155770_c0_seq1.mrna1;Target=comp155770_c0_seq1 614 1102 .
Chr2	stalkie_big_nohaplotig	CDS	154849515	154849577	.	-	0	Parent=comp155770_c0_seq1.mrna1;Target=comp155770_c0_seq1 1103 1165 .
Chr2	gffcl	locus	154875178	155500486	.	+	.	ID=RLOC_00022990;geneIDs=FBgn0039704.1.path1,comp151448_c0_seq1.path1,comp160398_c6_seq1.path1;transcripts=comp160398_c6_seq1.mrna1,FBgn0039704.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154875178	155499283	.	+	.	ID=comp160398_c6_seq1.mrna1;geneID=comp160398_c6_seq1.path1;Name=comp160398_c6_seq1;Dir=antisensecoverage=81.6;identity=95.4;matches=3905;mismatches=79;indels=111;unknowns=0;locus=RLOC_00022990
Chr2	stalkie_big_nohaplotig	exon	154875178	154875187	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5918 5927 -
Chr2	stalkie_big_nohaplotig	exon	154882511	154882523	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5875 5887 -
Chr2	stalkie_big_nohaplotig	exon	154894096	154894107	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5862 5873 -
Chr2	stalkie_big_nohaplotig	exon	154897326	154897328	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5859 5861 -
Chr2	stalkie_big_nohaplotig	exon	154911250	154911258	88	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5850 5858 -
Chr2	stalkie_big_nohaplotig	exon	154916102	154916112	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5835 5845 -
Chr2	stalkie_big_nohaplotig	exon	154919663	154919671	19	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5788 5834 -
Chr2	stalkie_big_nohaplotig	exon	154919805	154919811	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5781 5787 -
Chr2	stalkie_big_nohaplotig	exon	154928601	154928612	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5755 5766 -
Chr2	stalkie_big_nohaplotig	exon	154935738	154935739	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5753 5754 -
Chr2	stalkie_big_nohaplotig	exon	154935770	154935772	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5703 5705 -
Chr2	stalkie_big_nohaplotig	exon	154967090	154967093	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5699 5702 -
Chr2	stalkie_big_nohaplotig	exon	154982109	154982118	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5677 5686 -
Chr2	stalkie_big_nohaplotig	exon	154983218	154983222	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5672 5676 -
Chr2	stalkie_big_nohaplotig	exon	154989392	154989395	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5668 5671 -
Chr2	stalkie_big_nohaplotig	exon	155000058	155000071	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5634 5647 -
Chr2	stalkie_big_nohaplotig	exon	155021806	155021817	91	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5604 5615 -
Chr2	stalkie_big_nohaplotig	exon	155051177	155051185	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5595 5603 -
Chr2	stalkie_big_nohaplotig	exon	155051189	155051194	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5536 5541 -
Chr2	stalkie_big_nohaplotig	exon	155099516	155099523	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5484 5491 -
Chr2	stalkie_big_nohaplotig	exon	155099526	155099534	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5421 5429 -
Chr2	stalkie_big_nohaplotig	exon	155103914	155103956	55	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5373 5420 -
Chr2	stalkie_big_nohaplotig	exon	155115228	155115237	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5360 5369 -
Chr2	stalkie_big_nohaplotig	exon	155121566	155121573	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5317 5324 -
Chr2	stalkie_big_nohaplotig	exon	155136701	155136708	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5211 5218 -
Chr2	stalkie_big_nohaplotig	exon	155144973	155144980	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5113 5120 -
Chr2	stalkie_big_nohaplotig	exon	155144985	155144994	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5094 5103 -
Chr2	stalkie_big_nohaplotig	exon	155152458	155152466	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 5078 5086 -
Chr2	stalkie_big_nohaplotig	exon	155159595	155159606	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4959 4970 -
Chr2	stalkie_big_nohaplotig	exon	155170371	155170375	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4954 4958 -
Chr2	stalkie_big_nohaplotig	exon	155172074	155172075	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4952 4953 -
Chr2	stalkie_big_nohaplotig	exon	155203658	155203664	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4903 4909 -
Chr2	stalkie_big_nohaplotig	exon	155234114	155234119	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4897 4902 -
Chr2	stalkie_big_nohaplotig	exon	155269946	155269955	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4871 4880 -
Chr2	stalkie_big_nohaplotig	exon	155270000	155270015	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4814 4829 -
Chr2	stalkie_big_nohaplotig	exon	155272047	155272054	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4792 4799 -
Chr2	stalkie_big_nohaplotig	exon	155272077	155272085	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4758 4766 -
Chr2	stalkie_big_nohaplotig	exon	155278225	155278227	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4755 4757 -
Chr2	stalkie_big_nohaplotig	exon	155294821	155294835	80	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4740 4754 -
Chr2	stalkie_big_nohaplotig	exon	155297871	155297881	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4640 4650 -
Chr2	stalkie_big_nohaplotig	exon	155308598	155308601	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4636 4639 -
Chr2	stalkie_big_nohaplotig	exon	155320656	155320659	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4632 4635 -
Chr2	stalkie_big_nohaplotig	exon	155320849	155320875	42	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4578 4631 -
Chr2	stalkie_big_nohaplotig	exon	155328592	155328603	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4560 4571 -
Chr2	stalkie_big_nohaplotig	exon	155361890	155361899	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4546 4555 -
Chr2	stalkie_big_nohaplotig	exon	155391773	155391780	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4504 4511 -
Chr2	stalkie_big_nohaplotig	exon	155393442	155393445	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4500 4503 -
Chr2	stalkie_big_nohaplotig	exon	155412863	155412875	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4480 4492 -
Chr2	stalkie_big_nohaplotig	exon	155413671	155413681	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4435 4445 -
Chr2	stalkie_big_nohaplotig	exon	155417146	155417148	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4432 4434 -
Chr2	stalkie_big_nohaplotig	exon	155421638	155421641	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4428 4431 -
Chr2	stalkie_big_nohaplotig	exon	155425514	155425606	55	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4335 4427 -
Chr2	stalkie_big_nohaplotig	exon	155426358	155426369	66	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4323 4334 -
Chr2	stalkie_big_nohaplotig	exon	155438360	155438372	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4310 4322 -
Chr2	stalkie_big_nohaplotig	exon	155462822	155462831	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4300 4309 -
Chr2	stalkie_big_nohaplotig	exon	155485895	155485903	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4291 4299 -
Chr2	stalkie_big_nohaplotig	exon	155493355	155493378	54	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4276 4290 -
Chr2	stalkie_big_nohaplotig	exon	155495662	155495879	95	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4055 4275 -
Chr2	stalkie_big_nohaplotig	exon	155496000	155496098	98	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 3956 4054 -
Chr2	stalkie_big_nohaplotig	exon	155496165	155496303	100	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 3817 3955 -
Chr2	stalkie_big_nohaplotig	exon	155496389	155499283	99	+	.	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 917 3816 -
Chr2	stalkie_big_nohaplotig	CDS	155426360	155426369	.	+	0	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4323 4332 .
Chr2	stalkie_big_nohaplotig	CDS	155438360	155438372	.	+	2	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4310 4322 .
Chr2	stalkie_big_nohaplotig	CDS	155462822	155462831	.	+	1	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4300 4309 .
Chr2	stalkie_big_nohaplotig	CDS	155485895	155485903	.	+	0	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4291 4299 .
Chr2	stalkie_big_nohaplotig	CDS	155493355	155493378	.	+	0	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4276 4290 .
Chr2	stalkie_big_nohaplotig	CDS	155495662	155495879	.	+	0	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 4055 4275 .
Chr2	stalkie_big_nohaplotig	CDS	155496000	155496098	.	+	1	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 3956 4054 .
Chr2	stalkie_big_nohaplotig	CDS	155496165	155496303	.	+	1	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 3817 3955 .
Chr2	stalkie_big_nohaplotig	CDS	155496389	155498935	.	+	0	Parent=comp160398_c6_seq1.mrna1;Target=comp160398_c6_seq1 1264 3816 .
Chr2	stalkie_big_nohaplotig	mRNA	155116360	155122084	.	+	.	ID=FBgn0039704.1.mrna1;geneID=FBgn0039704.1.path1;Name=FBgn0039704.1;Dir=sensecoverage=99.8;identity=99.8;matches=2531;mismatches=4;indels=0;unknowns=0;locus=RLOC_00022990
Chr2	stalkie_big_nohaplotig	exon	155116360	155116892	100	+	.	Parent=FBgn0039704.1.mrna1;Target=FBgn0039704.1 7 539 +
Chr2	stalkie_big_nohaplotig	exon	155119228	155119388	100	+	.	Parent=FBgn0039704.1.mrna1;Target=FBgn0039704.1 540 700 +
Chr2	stalkie_big_nohaplotig	exon	155119836	155120037	100	+	.	Parent=FBgn0039704.1.mrna1;Target=FBgn0039704.1 701 902 +
Chr2	stalkie_big_nohaplotig	exon	155120211	155120462	99	+	.	Parent=FBgn0039704.1.mrna1;Target=FBgn0039704.1 903 1154 +
Chr2	stalkie_big_nohaplotig	exon	155120519	155121453	99	+	.	Parent=FBgn0039704.1.mrna1;Target=FBgn0039704.1 1155 2089 +
Chr2	stalkie_big_nohaplotig	exon	155121557	155121766	100	+	.	Parent=FBgn0039704.1.mrna1;Target=FBgn0039704.1 2090 2299 +
Chr2	stalkie_big_nohaplotig	exon	155121843	155122084	100	+	.	Parent=FBgn0039704.1.mrna1;Target=FBgn0039704.1 2300 2541 +
Chr2	stalkie_big_nohaplotig	CDS	155116360	155116892	.	+	0	Parent=FBgn0039704.1.mrna1;Target=FBgn0039704.1 7 539 +
Chr2	stalkie_big_nohaplotig	CDS	155119228	155119388	.	+	1	Parent=FBgn0039704.1.mrna1;Target=FBgn0039704.1 540 700 +
Chr2	stalkie_big_nohaplotig	CDS	155119836	155120037	.	+	2	Parent=FBgn0039704.1.mrna1;Target=FBgn0039704.1 701 902 +
Chr2	stalkie_big_nohaplotig	CDS	155120211	155120462	.	+	1	Parent=FBgn0039704.1.mrna1;Target=FBgn0039704.1 903 1154 +
Chr2	stalkie_big_nohaplotig	CDS	155120519	155121453	.	+	1	Parent=FBgn0039704.1.mrna1;Target=FBgn0039704.1 1155 2089 +
Chr2	stalkie_big_nohaplotig	CDS	155121557	155121766	.	+	2	Parent=FBgn0039704.1.mrna1;Target=FBgn0039704.1 2090 2299 +
Chr2	stalkie_big_nohaplotig	CDS	155121843	155122084	.	+	2	Parent=FBgn0039704.1.mrna1;Target=FBgn0039704.1 2300 2541 +
Chr2	gffcl	locus	154902284	154987621	.	+	.	ID=RLOC_00022991;geneIDs=FBgn0039705.1.path1;transcripts=FBgn0039705.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154902284	154987621	.	+	.	ID=FBgn0039705.1.mrna1;geneID=FBgn0039705.1.path1;Name=FBgn0039705.1;Dir=sensecoverage=67.8;identity=99.6;matches=1207;mismatches=5;indels=0;unknowns=0;locus=RLOC_00022991
Chr2	stalkie_big_nohaplotig	exon	154902284	154902372	100	+	.	Parent=FBgn0039705.1.mrna1;Target=FBgn0039705.1 577 665 +
Chr2	stalkie_big_nohaplotig	exon	154905134	154905492	99	+	.	Parent=FBgn0039705.1.mrna1;Target=FBgn0039705.1 666 1024 +
Chr2	stalkie_big_nohaplotig	exon	154905560	154905702	100	+	.	Parent=FBgn0039705.1.mrna1;Target=FBgn0039705.1 1025 1167 +
Chr2	stalkie_big_nohaplotig	exon	154986590	154986890	100	+	.	Parent=FBgn0039705.1.mrna1;Target=FBgn0039705.1 1168 1468 +
Chr2	stalkie_big_nohaplotig	exon	154986957	154987041	100	+	.	Parent=FBgn0039705.1.mrna1;Target=FBgn0039705.1 1469 1553 +
Chr2	stalkie_big_nohaplotig	exon	154987114	154987257	100	+	.	Parent=FBgn0039705.1.mrna1;Target=FBgn0039705.1 1554 1697 +
Chr2	stalkie_big_nohaplotig	exon	154987531	154987621	97	+	.	Parent=FBgn0039705.1.mrna1;Target=FBgn0039705.1 1698 1788 +
Chr2	stalkie_big_nohaplotig	CDS	154902284	154902372	.	+	0	Parent=FBgn0039705.1.mrna1;Target=FBgn0039705.1 577 665 +
Chr2	stalkie_big_nohaplotig	CDS	154905134	154905492	.	+	1	Parent=FBgn0039705.1.mrna1;Target=FBgn0039705.1 666 1024 +
Chr2	stalkie_big_nohaplotig	CDS	154905560	154905702	.	+	2	Parent=FBgn0039705.1.mrna1;Target=FBgn0039705.1 1025 1167 +
Chr2	stalkie_big_nohaplotig	CDS	154986590	154986890	.	+	0	Parent=FBgn0039705.1.mrna1;Target=FBgn0039705.1 1168 1468 +
Chr2	stalkie_big_nohaplotig	CDS	154986957	154987041	.	+	2	Parent=FBgn0039705.1.mrna1;Target=FBgn0039705.1 1469 1553 +
Chr2	stalkie_big_nohaplotig	CDS	154987114	154987257	.	+	1	Parent=FBgn0039705.1.mrna1;Target=FBgn0039705.1 1554 1697 +
Chr2	stalkie_big_nohaplotig	CDS	154987531	154987621	.	+	1	Parent=FBgn0039705.1.mrna1;Target=FBgn0039705.1 1698 1788 +
Chr2	gffcl	locus	154931439	154976316	.	-	.	ID=RLOC_00022992;geneIDs=comp155238_c0_seq1.path1;transcripts=comp155238_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154931439	154976316	.	-	.	ID=comp155238_c0_seq1.mrna1;geneID=comp155238_c0_seq1.path1;Name=comp155238_c0_seq1;Dir=antisensecoverage=99.8;identity=99.2;matches=983;mismatches=6;indels=2;unknowns=0;Target=comp155238_c0_seq1 3 473 .;locus=RLOC_00022992
Chr2	stalkie_big_nohaplotig	exon	154931439	154931957	99	-	.	Parent=comp155238_c0_seq1.mrna1;Target=comp155238_c0_seq1 3 521 -
Chr2	stalkie_big_nohaplotig	exon	154951155	154951253	100	-	.	Parent=comp155238_c0_seq1.mrna1;Target=comp155238_c0_seq1 522 620 -
Chr2	stalkie_big_nohaplotig	exon	154975946	154976316	98	-	.	Parent=comp155238_c0_seq1.mrna1;Target=comp155238_c0_seq1 621 993 -
Chr2	stalkie_big_nohaplotig	CDS	154931439	154931909	.	-	0	Parent=comp155238_c0_seq1.mrna1
Chr2	gffcl	locus	154993632	154995014	.	+	.	ID=RLOC_00022993;geneIDs=FBgn0085454.1.path1;transcripts=FBgn0085454.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	154993632	154995014	.	+	.	ID=FBgn0085454.1.mrna1;geneID=FBgn0085454.1.path1;Name=FBgn0085454.1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1376;mismatches=7;indels=0;unknowns=0;Target=FBgn0085454.1 1383 1 .;locus=RLOC_00022993
Chr2	stalkie_big_nohaplotig	exon	154993632	154995014	99	+	.	Parent=FBgn0085454.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	154993632	154995014	.	+	0	Parent=FBgn0085454.1.mrna1
Chr2	gffcl	locus	155071697	155072636	.	-	.	ID=RLOC_00022994;geneIDs=Dv_FBgn0199620.1.path1;transcripts=Dv_FBgn0199620.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155071697	155072636	.	-	.	ID=Dv_FBgn0199620.1.mrna1;geneID=Dv_FBgn0199620.1.path1;Name=Dv_FBgn0199620.1;Dir=sensecoverage=100.0;identity=99.9;matches=866;mismatches=1;indels=0;unknowns=0;locus=RLOC_00022994
Chr2	stalkie_big_nohaplotig	exon	155071697	155071867	100	-	.	Parent=Dv_FBgn0199620.1.mrna1;Target=Dv_FBgn0199620.1 697 867 +
Chr2	stalkie_big_nohaplotig	exon	155071941	155072636	99	-	.	Parent=Dv_FBgn0199620.1.mrna1;Target=Dv_FBgn0199620.1 1 696 +
Chr2	stalkie_big_nohaplotig	CDS	155071697	155071867	.	-	0	Parent=Dv_FBgn0199620.1.mrna1;Target=Dv_FBgn0199620.1 697 867 +
Chr2	stalkie_big_nohaplotig	CDS	155071941	155072636	.	-	0	Parent=Dv_FBgn0199620.1.mrna1;Target=Dv_FBgn0199620.1 1 696 +
Chr2	gffcl	locus	155073618	155074698	.	-	.	ID=RLOC_00022995;geneIDs=comp150773_c0_seq1.path1;transcripts=comp150773_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155073618	155074698	.	-	.	ID=comp150773_c0_seq1.mrna1;geneID=comp150773_c0_seq1.path1;Name=comp150773_c0_seq1;Dir=sensecoverage=99.7;identity=98.3;matches=1008;mismatches=16;indels=1;unknowns=0;locus=RLOC_00022995
Chr2	stalkie_big_nohaplotig	exon	155073618	155073864	99	-	.	Parent=comp150773_c0_seq1.mrna1;Target=comp150773_c0_seq1 779 1025 +
Chr2	stalkie_big_nohaplotig	exon	155073922	155074698	98	-	.	Parent=comp150773_c0_seq1.mrna1;Target=comp150773_c0_seq1 1 778 +
Chr2	stalkie_big_nohaplotig	CDS	155073688	155073864	.	-	0	Parent=comp150773_c0_seq1.mrna1;Target=comp150773_c0_seq1 779 955 +
Chr2	stalkie_big_nohaplotig	CDS	155073922	155074572	.	-	0	Parent=comp150773_c0_seq1.mrna1;Target=comp150773_c0_seq1 128 778 +
Chr2	gffcl	locus	155097249	155097736	.	-	.	ID=RLOC_00022996;geneIDs=FBgn0038662.1.path1;transcripts=FBgn0038662.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155097249	155097736	.	-	.	ID=FBgn0038662.1.mrna1;geneID=FBgn0038662.1.path1;Name=FBgn0038662.1;Dir=sensecoverage=100.0;identity=99.2;matches=366;mismatches=3;indels=0;unknowns=0;locus=RLOC_00022996
Chr2	stalkie_big_nohaplotig	exon	155097249	155097403	100	-	.	Parent=FBgn0038662.1.mrna1;Target=FBgn0038662.1 215 369 +
Chr2	stalkie_big_nohaplotig	exon	155097461	155097561	98	-	.	Parent=FBgn0038662.1.mrna1;Target=FBgn0038662.1 114 214 +
Chr2	stalkie_big_nohaplotig	exon	155097624	155097736	99	-	.	Parent=FBgn0038662.1.mrna1;Target=FBgn0038662.1 1 113 +
Chr2	stalkie_big_nohaplotig	CDS	155097249	155097403	.	-	2	Parent=FBgn0038662.1.mrna1;Target=FBgn0038662.1 215 369 +
Chr2	stalkie_big_nohaplotig	CDS	155097461	155097561	.	-	1	Parent=FBgn0038662.1.mrna1;Target=FBgn0038662.1 114 214 +
Chr2	stalkie_big_nohaplotig	CDS	155097624	155097736	.	-	0	Parent=FBgn0038662.1.mrna1;Target=FBgn0038662.1 1 113 +
Chr2	gffcl	locus	155130174	155131535	.	+	.	ID=RLOC_00022997;geneIDs=FBgn0032771.1.path1;transcripts=FBgn0032771.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155130174	155131535	.	+	.	ID=FBgn0032771.1.mrna1;geneID=FBgn0032771.1.path1;Name=FBgn0032771.1;Dir=sensecoverage=100.0;identity=99.2;matches=857;mismatches=7;indels=0;unknowns=0;locus=RLOC_00022997
Chr2	stalkie_big_nohaplotig	exon	155130174	155130278	100	+	.	Parent=FBgn0032771.1.mrna1;Target=FBgn0032771.1 1 105 +
Chr2	stalkie_big_nohaplotig	exon	155130337	155130407	100	+	.	Parent=FBgn0032771.1.mrna1;Target=FBgn0032771.1 106 176 +
Chr2	stalkie_big_nohaplotig	exon	155130735	155130962	99	+	.	Parent=FBgn0032771.1.mrna1;Target=FBgn0032771.1 177 404 +
Chr2	stalkie_big_nohaplotig	exon	155131015	155131205	98	+	.	Parent=FBgn0032771.1.mrna1;Target=FBgn0032771.1 405 595 +
Chr2	stalkie_big_nohaplotig	exon	155131267	155131535	98	+	.	Parent=FBgn0032771.1.mrna1;Target=FBgn0032771.1 596 864 +
Chr2	stalkie_big_nohaplotig	CDS	155130174	155130278	.	+	0	Parent=FBgn0032771.1.mrna1;Target=FBgn0032771.1 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	155130337	155130407	.	+	0	Parent=FBgn0032771.1.mrna1;Target=FBgn0032771.1 106 176 +
Chr2	stalkie_big_nohaplotig	CDS	155130735	155130962	.	+	1	Parent=FBgn0032771.1.mrna1;Target=FBgn0032771.1 177 404 +
Chr2	stalkie_big_nohaplotig	CDS	155131015	155131205	.	+	1	Parent=FBgn0032771.1.mrna1;Target=FBgn0032771.1 405 595 +
Chr2	stalkie_big_nohaplotig	CDS	155131267	155131535	.	+	2	Parent=FBgn0032771.1.mrna1;Target=FBgn0032771.1 596 864 +
Chr2	gffcl	locus	155273436	155299456	.	+	.	ID=RLOC_00022999;geneIDs=comp149778_c1_seq1.path1;transcripts=comp149778_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155273436	155299456	.	+	.	ID=comp149778_c1_seq1.mrna1;geneID=comp149778_c1_seq1.path1;Name=comp149778_c1_seq1;Dir=antisensecoverage=98.9;identity=94.4;matches=501;mismatches=21;indels=9;unknowns=0;Target=comp149778_c1_seq1 526 534 .;locus=RLOC_00022999
Chr2	stalkie_big_nohaplotig	exon	155273436	155273803	93	+	.	Parent=comp149778_c1_seq1.mrna1;Target=comp149778_c1_seq1 162 536 -
Chr2	stalkie_big_nohaplotig	exon	155273944	155273989	95	+	.	Parent=comp149778_c1_seq1.mrna1;Target=comp149778_c1_seq1 116 161 -
Chr2	stalkie_big_nohaplotig	exon	155299266	155299330	100	+	.	Parent=comp149778_c1_seq1.mrna1;Target=comp149778_c1_seq1 51 115 -
Chr2	stalkie_big_nohaplotig	exon	155299413	155299456	93	+	.	Parent=comp149778_c1_seq1.mrna1;Target=comp149778_c1_seq1 7 50 -
Chr2	stalkie_big_nohaplotig	CDS	155273438	155273446	.	+	0	Parent=comp149778_c1_seq1.mrna1
Chr2	gffcl	locus	155413501	155414782	.	-	.	ID=RLOC_00023000;geneIDs=FBgn0035044.2.path1;transcripts=FBgn0035044.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155413501	155414782	.	-	.	ID=FBgn0035044.2.mrna1;geneID=FBgn0035044.2.path1;Name=FBgn0035044.2;Dir=sensecoverage=100.0;identity=100.0;matches=606;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023000
Chr2	stalkie_big_nohaplotig	exon	155413501	155413752	100	-	.	Parent=FBgn0035044.2.mrna1;Target=FBgn0035044.2 355 606 +
Chr2	stalkie_big_nohaplotig	exon	155413815	155414027	100	-	.	Parent=FBgn0035044.2.mrna1;Target=FBgn0035044.2 142 354 +
Chr2	stalkie_big_nohaplotig	exon	155414642	155414782	100	-	.	Parent=FBgn0035044.2.mrna1;Target=FBgn0035044.2 1 141 +
Chr2	stalkie_big_nohaplotig	CDS	155413501	155413752	.	-	0	Parent=FBgn0035044.2.mrna1;Target=FBgn0035044.2 355 606 +
Chr2	stalkie_big_nohaplotig	CDS	155413815	155414027	.	-	0	Parent=FBgn0035044.2.mrna1;Target=FBgn0035044.2 142 354 +
Chr2	stalkie_big_nohaplotig	CDS	155414642	155414782	.	-	0	Parent=FBgn0035044.2.mrna1;Target=FBgn0035044.2 1 141 +
Chr2	gffcl	locus	155473165	155474449	.	+	.	ID=RLOC_00023001;geneIDs=comp146487_c1_seq1.path1;transcripts=comp146487_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155473165	155474449	.	+	.	ID=comp146487_c1_seq1.mrna1;geneID=comp146487_c1_seq1.path1;Name=comp146487_c1_seq1;Dir=indeterminatecoverage=99.8;identity=99.6;matches=1283;mismatches=2;indels=3;unknowns=0;Target=comp146487_c1_seq1 1290 3 .;CDS_Target=comp146487_c1_seq1 618 463 .;locus=RLOC_00023001
Chr2	stalkie_big_nohaplotig	exon	155473165	155474449	99	+	.	Parent=comp146487_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155473622	155473777	.	+	0	Parent=comp146487_c1_seq1.mrna1
Chr2	gffcl	locus	155500505	155502151	.	+	.	ID=RLOC_00023002;geneIDs=comp160264_c0_seq1.path1;transcripts=comp160264_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155500505	155502151	.	+	.	ID=comp160264_c0_seq1.mrna1;geneID=comp160264_c0_seq1.path1;Name=comp160264_c0_seq1;Dir=indeterminatecoverage=99.7;identity=97.7;matches=1622;mismatches=25;indels=14;unknowns=0;Target=comp160264_c0_seq1 1666 6 .;CDS_Target=comp160264_c0_seq1 1197 1114 .;locus=RLOC_00023002
Chr2	stalkie_big_nohaplotig	exon	155500505	155502151	97	+	.	Parent=comp160264_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155501600	155501683	.	+	0	Parent=comp160264_c0_seq1.mrna1
Chr2	gffcl	locus	155502389	155502711	.	-	.	ID=RLOC_00023003;geneIDs=comp141500_c0_seq1.path1;transcripts=comp141500_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155502389	155502711	.	-	.	ID=comp141500_c0_seq1.mrna1;geneID=comp141500_c0_seq1.path1;Name=comp141500_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=323;mismatches=0;indels=0;unknowns=0;Target=comp141500_c0_seq1 323 1 .;CDS_Target=comp141500_c0_seq1 107 3 .;locus=RLOC_00023003
Chr2	stalkie_big_nohaplotig	exon	155502389	155502711	100	-	.	Parent=comp141500_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155502605	155502709	.	-	0	Parent=comp141500_c0_seq1.mrna1
Chr2	gffcl	locus	155504845	155508526	.	-	.	ID=RLOC_00023004;geneIDs=FBgn0039634.1.path1;transcripts=FBgn0039634.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155504845	155508526	.	-	.	ID=FBgn0039634.1.mrna1;geneID=FBgn0039634.1.path1;Name=FBgn0039634.1;Dir=sensecoverage=100.0;identity=99.2;matches=2041;mismatches=17;indels=0;unknowns=0;locus=RLOC_00023004
Chr2	stalkie_big_nohaplotig	exon	155504845	155505490	99	-	.	Parent=FBgn0039634.1.mrna1;Target=FBgn0039634.1 1413 2058 +
Chr2	stalkie_big_nohaplotig	exon	155505553	155505740	98	-	.	Parent=FBgn0039634.1.mrna1;Target=FBgn0039634.1 1225 1412 +
Chr2	stalkie_big_nohaplotig	exon	155505797	155505988	99	-	.	Parent=FBgn0039634.1.mrna1;Target=FBgn0039634.1 1033 1224 +
Chr2	stalkie_big_nohaplotig	exon	155506042	155506190	99	-	.	Parent=FBgn0039634.1.mrna1;Target=FBgn0039634.1 884 1032 +
Chr2	stalkie_big_nohaplotig	exon	155506264	155506744	98	-	.	Parent=FBgn0039634.1.mrna1;Target=FBgn0039634.1 403 883 +
Chr2	stalkie_big_nohaplotig	exon	155508054	155508344	99	-	.	Parent=FBgn0039634.1.mrna1;Target=FBgn0039634.1 112 402 +
Chr2	stalkie_big_nohaplotig	exon	155508416	155508526	99	-	.	Parent=FBgn0039634.1.mrna1;Target=FBgn0039634.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	155504845	155505490	.	-	1	Parent=FBgn0039634.1.mrna1;Target=FBgn0039634.1 1413 2058 +
Chr2	stalkie_big_nohaplotig	CDS	155505553	155505740	.	-	0	Parent=FBgn0039634.1.mrna1;Target=FBgn0039634.1 1225 1412 +
Chr2	stalkie_big_nohaplotig	CDS	155505797	155505988	.	-	0	Parent=FBgn0039634.1.mrna1;Target=FBgn0039634.1 1033 1224 +
Chr2	stalkie_big_nohaplotig	CDS	155506042	155506190	.	-	2	Parent=FBgn0039634.1.mrna1;Target=FBgn0039634.1 884 1032 +
Chr2	stalkie_big_nohaplotig	CDS	155506264	155506744	.	-	0	Parent=FBgn0039634.1.mrna1;Target=FBgn0039634.1 403 883 +
Chr2	stalkie_big_nohaplotig	CDS	155508054	155508344	.	-	0	Parent=FBgn0039634.1.mrna1;Target=FBgn0039634.1 112 402 +
Chr2	stalkie_big_nohaplotig	CDS	155508416	155508526	.	-	0	Parent=FBgn0039634.1.mrna1;Target=FBgn0039634.1 1 111 +
Chr2	gffcl	locus	155509390	155525908	.	-	.	ID=RLOC_00023005;geneIDs=FBgn0051064.1.path1;transcripts=FBgn0051064.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155509390	155525908	.	-	.	ID=FBgn0051064.1.mrna1;geneID=FBgn0051064.1.path1;Name=FBgn0051064.1;Dir=sensecoverage=100.0;identity=99.5;matches=2168;mismatches=10;indels=0;unknowns=0;locus=RLOC_00023005
Chr2	stalkie_big_nohaplotig	exon	155509390	155510020	99	-	.	Parent=FBgn0051064.1.mrna1;Target=FBgn0051064.1 1548 2178 +
Chr2	stalkie_big_nohaplotig	exon	155512608	155512705	97	-	.	Parent=FBgn0051064.1.mrna1;Target=FBgn0051064.1 1450 1547 +
Chr2	stalkie_big_nohaplotig	exon	155515859	155516148	99	-	.	Parent=FBgn0051064.1.mrna1;Target=FBgn0051064.1 1160 1449 +
Chr2	stalkie_big_nohaplotig	exon	155516572	155516717	99	-	.	Parent=FBgn0051064.1.mrna1;Target=FBgn0051064.1 1014 1159 +
Chr2	stalkie_big_nohaplotig	exon	155516786	155517027	99	-	.	Parent=FBgn0051064.1.mrna1;Target=FBgn0051064.1 772 1013 +
Chr2	stalkie_big_nohaplotig	exon	155517096	155517350	99	-	.	Parent=FBgn0051064.1.mrna1;Target=FBgn0051064.1 517 771 +
Chr2	stalkie_big_nohaplotig	exon	155517414	155517592	99	-	.	Parent=FBgn0051064.1.mrna1;Target=FBgn0051064.1 338 516 +
Chr2	stalkie_big_nohaplotig	exon	155525572	155525908	99	-	.	Parent=FBgn0051064.1.mrna1;Target=FBgn0051064.1 1 337 +
Chr2	stalkie_big_nohaplotig	CDS	155509390	155510020	.	-	1	Parent=FBgn0051064.1.mrna1;Target=FBgn0051064.1 1548 2178 +
Chr2	stalkie_big_nohaplotig	CDS	155512608	155512705	.	-	0	Parent=FBgn0051064.1.mrna1;Target=FBgn0051064.1 1450 1547 +
Chr2	stalkie_big_nohaplotig	CDS	155515859	155516148	.	-	2	Parent=FBgn0051064.1.mrna1;Target=FBgn0051064.1 1160 1449 +
Chr2	stalkie_big_nohaplotig	CDS	155516572	155516717	.	-	1	Parent=FBgn0051064.1.mrna1;Target=FBgn0051064.1 1014 1159 +
Chr2	stalkie_big_nohaplotig	CDS	155516786	155517027	.	-	0	Parent=FBgn0051064.1.mrna1;Target=FBgn0051064.1 772 1013 +
Chr2	stalkie_big_nohaplotig	CDS	155517096	155517350	.	-	0	Parent=FBgn0051064.1.mrna1;Target=FBgn0051064.1 517 771 +
Chr2	stalkie_big_nohaplotig	CDS	155517414	155517592	.	-	2	Parent=FBgn0051064.1.mrna1;Target=FBgn0051064.1 338 516 +
Chr2	stalkie_big_nohaplotig	CDS	155525572	155525908	.	-	0	Parent=FBgn0051064.1.mrna1;Target=FBgn0051064.1 1 337 +
Chr2	gffcl	locus	155513550	155514829	.	-	.	ID=RLOC_00023006;geneIDs=comp155806_c0_seq1.path1;transcripts=comp155806_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155513550	155514829	.	-	.	ID=comp155806_c0_seq1.mrna1;geneID=comp155806_c0_seq1.path1;Name=comp155806_c0_seq1;Dir=indeterminatecoverage=98.5;identity=97.0;matches=1246;mismatches=34;indels=4;unknowns=0;Target=comp155806_c0_seq1 1292 9 .;CDS_Target=comp155806_c0_seq1 328 200 .;locus=RLOC_00023006
Chr2	stalkie_big_nohaplotig	exon	155513550	155514829	97	-	.	Parent=comp155806_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155514511	155514639	.	-	0	Parent=comp155806_c0_seq1.mrna1
Chr2	gffcl	locus	155518991	155521442	.	+	.	ID=RLOC_00023007;geneIDs=FBgn0051068.1.path1;transcripts=FBgn0051068.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155518991	155521442	.	+	.	ID=FBgn0051068.1.mrna1;geneID=FBgn0051068.1.path1;Name=FBgn0051068.1;Dir=sensecoverage=100.0;identity=99.1;matches=2236;mismatches=14;indels=6;unknowns=0;locus=RLOC_00023007
Chr2	stalkie_big_nohaplotig	exon	155518991	155519521	99	+	.	Parent=FBgn0051068.1.mrna1;Target=FBgn0051068.1 1 531 +
Chr2	stalkie_big_nohaplotig	exon	155519584	155520928	99	+	.	Parent=FBgn0051068.1.mrna1;Target=FBgn0051068.1 532 1876 +
Chr2	stalkie_big_nohaplotig	exon	155521001	155521290	97	+	.	Parent=FBgn0051068.1.mrna1;Target=FBgn0051068.1 1877 2172 +
Chr2	stalkie_big_nohaplotig	exon	155521359	155521442	100	+	.	Parent=FBgn0051068.1.mrna1;Target=FBgn0051068.1 2173 2256 +
Chr2	stalkie_big_nohaplotig	CDS	155519099	155519521	.	+	0	Parent=FBgn0051068.1.mrna1;Target=FBgn0051068.1 109 531 +
Chr2	stalkie_big_nohaplotig	CDS	155519584	155520928	.	+	0	Parent=FBgn0051068.1.mrna1;Target=FBgn0051068.1 532 1876 +
Chr2	stalkie_big_nohaplotig	CDS	155521001	155521290	.	+	2	Parent=FBgn0051068.1.mrna1;Target=FBgn0051068.1 1877 2172 +
Chr2	stalkie_big_nohaplotig	CDS	155521359	155521442	.	+	0	Parent=FBgn0051068.1.mrna1;Target=FBgn0051068.1 2173 2256 +
Chr2	gffcl	locus	155528948	155529993	.	+	.	ID=RLOC_00023008;geneIDs=comp152363_c2_seq1.path1;transcripts=comp152363_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155528948	155529993	.	+	.	ID=comp152363_c2_seq1.mrna1;geneID=comp152363_c2_seq1.path1;Name=comp152363_c2_seq1;Dir=indeterminatecoverage=100.0;identity=95.4;matches=1000;mismatches=10;indels=38;unknowns=0;Target=comp152363_c2_seq1 1012 1 .;CDS_Target=comp152363_c2_seq1 748 521 .;locus=RLOC_00023008
Chr2	stalkie_big_nohaplotig	exon	155528948	155529993	95	+	.	Parent=comp152363_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155529466	155529693	.	+	0	Parent=comp152363_c2_seq1.mrna1
Chr2	gffcl	locus	155536444	155537799	.	+	.	ID=RLOC_00023009;geneIDs=FBgn0039714.1.path1;transcripts=FBgn0039714.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155536444	155537799	.	+	.	ID=FBgn0039714.1.mrna1;geneID=FBgn0039714.1.path1;Name=FBgn0039714.1;Dir=sensecoverage=100.0;identity=99.1;matches=1073;mismatches=10;indels=0;unknowns=0;locus=RLOC_00023009
Chr2	stalkie_big_nohaplotig	exon	155536444	155536681	99	+	.	Parent=FBgn0039714.1.mrna1;Target=FBgn0039714.1 1 238 +
Chr2	stalkie_big_nohaplotig	exon	155536747	155536857	97	+	.	Parent=FBgn0039714.1.mrna1;Target=FBgn0039714.1 239 349 +
Chr2	stalkie_big_nohaplotig	exon	155536930	155537334	98	+	.	Parent=FBgn0039714.1.mrna1;Target=FBgn0039714.1 350 754 +
Chr2	stalkie_big_nohaplotig	exon	155537400	155537555	99	+	.	Parent=FBgn0039714.1.mrna1;Target=FBgn0039714.1 755 910 +
Chr2	stalkie_big_nohaplotig	exon	155537627	155537799	100	+	.	Parent=FBgn0039714.1.mrna1;Target=FBgn0039714.1 911 1083 +
Chr2	stalkie_big_nohaplotig	CDS	155536444	155536681	.	+	0	Parent=FBgn0039714.1.mrna1;Target=FBgn0039714.1 1 238 +
Chr2	stalkie_big_nohaplotig	CDS	155536747	155536857	.	+	2	Parent=FBgn0039714.1.mrna1;Target=FBgn0039714.1 239 349 +
Chr2	stalkie_big_nohaplotig	CDS	155536930	155537334	.	+	2	Parent=FBgn0039714.1.mrna1;Target=FBgn0039714.1 350 754 +
Chr2	stalkie_big_nohaplotig	CDS	155537400	155537555	.	+	2	Parent=FBgn0039714.1.mrna1;Target=FBgn0039714.1 755 910 +
Chr2	stalkie_big_nohaplotig	CDS	155537627	155537799	.	+	2	Parent=FBgn0039714.1.mrna1;Target=FBgn0039714.1 911 1083 +
Chr2	gffcl	locus	155541525	155543534	.	-	.	ID=RLOC_00023010;geneIDs=Dv_FBgn0197903.1.path1;transcripts=Dv_FBgn0197903.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155541525	155543534	.	-	.	ID=Dv_FBgn0197903.1.mrna1;geneID=Dv_FBgn0197903.1.path1;Name=Dv_FBgn0197903.1;Dir=sensecoverage=100.0;identity=99.6;matches=1691;mismatches=7;indels=0;unknowns=0;locus=RLOC_00023010
Chr2	stalkie_big_nohaplotig	exon	155541525	155541851	100	-	.	Parent=Dv_FBgn0197903.1.mrna1;Target=Dv_FBgn0197903.1 1372 1698 +
Chr2	stalkie_big_nohaplotig	exon	155541917	155542090	98	-	.	Parent=Dv_FBgn0197903.1.mrna1;Target=Dv_FBgn0197903.1 1198 1371 +
Chr2	stalkie_big_nohaplotig	exon	155542152	155542619	99	-	.	Parent=Dv_FBgn0197903.1.mrna1;Target=Dv_FBgn0197903.1 730 1197 +
Chr2	stalkie_big_nohaplotig	exon	155542692	155542970	99	-	.	Parent=Dv_FBgn0197903.1.mrna1;Target=Dv_FBgn0197903.1 451 729 +
Chr2	stalkie_big_nohaplotig	exon	155543021	155543203	99	-	.	Parent=Dv_FBgn0197903.1.mrna1;Target=Dv_FBgn0197903.1 268 450 +
Chr2	stalkie_big_nohaplotig	exon	155543268	155543534	100	-	.	Parent=Dv_FBgn0197903.1.mrna1;Target=Dv_FBgn0197903.1 1 267 +
Chr2	stalkie_big_nohaplotig	CDS	155541525	155541851	.	-	0	Parent=Dv_FBgn0197903.1.mrna1;Target=Dv_FBgn0197903.1 1372 1698 +
Chr2	stalkie_big_nohaplotig	CDS	155541917	155542090	.	-	0	Parent=Dv_FBgn0197903.1.mrna1;Target=Dv_FBgn0197903.1 1198 1371 +
Chr2	stalkie_big_nohaplotig	CDS	155542152	155542619	.	-	0	Parent=Dv_FBgn0197903.1.mrna1;Target=Dv_FBgn0197903.1 730 1197 +
Chr2	stalkie_big_nohaplotig	CDS	155542692	155542970	.	-	0	Parent=Dv_FBgn0197903.1.mrna1;Target=Dv_FBgn0197903.1 451 729 +
Chr2	stalkie_big_nohaplotig	CDS	155543021	155543203	.	-	0	Parent=Dv_FBgn0197903.1.mrna1;Target=Dv_FBgn0197903.1 268 450 +
Chr2	stalkie_big_nohaplotig	CDS	155543268	155543534	.	-	0	Parent=Dv_FBgn0197903.1.mrna1;Target=Dv_FBgn0197903.1 1 267 +
Chr2	gffcl	locus	155546794	155548530	.	-	.	ID=RLOC_00023011;geneIDs=FBgn0037667.1.path1;transcripts=FBgn0037667.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155546794	155548530	.	-	.	ID=FBgn0037667.1.mrna1;geneID=FBgn0037667.1.path1;Name=FBgn0037667.1;Dir=sensecoverage=100.0;identity=98.8;matches=1373;mismatches=16;indels=0;unknowns=0;locus=RLOC_00023011
Chr2	stalkie_big_nohaplotig	exon	155546794	155546916	99	-	.	Parent=FBgn0037667.1.mrna1;Target=FBgn0037667.1 1267 1389 +
Chr2	stalkie_big_nohaplotig	exon	155546971	155547114	99	-	.	Parent=FBgn0037667.1.mrna1;Target=FBgn0037667.1 1123 1266 +
Chr2	stalkie_big_nohaplotig	exon	155547166	155547477	99	-	.	Parent=FBgn0037667.1.mrna1;Target=FBgn0037667.1 811 1122 +
Chr2	stalkie_big_nohaplotig	exon	155547538	155547693	98	-	.	Parent=FBgn0037667.1.mrna1;Target=FBgn0037667.1 655 810 +
Chr2	stalkie_big_nohaplotig	exon	155547758	155547898	97	-	.	Parent=FBgn0037667.1.mrna1;Target=FBgn0037667.1 514 654 +
Chr2	stalkie_big_nohaplotig	exon	155547956	155548183	98	-	.	Parent=FBgn0037667.1.mrna1;Target=FBgn0037667.1 286 513 +
Chr2	stalkie_big_nohaplotig	exon	155548246	155548530	98	-	.	Parent=FBgn0037667.1.mrna1;Target=FBgn0037667.1 1 285 +
Chr2	stalkie_big_nohaplotig	CDS	155546794	155546916	.	-	0	Parent=FBgn0037667.1.mrna1;Target=FBgn0037667.1 1267 1389 +
Chr2	stalkie_big_nohaplotig	CDS	155546971	155547114	.	-	0	Parent=FBgn0037667.1.mrna1;Target=FBgn0037667.1 1123 1266 +
Chr2	stalkie_big_nohaplotig	CDS	155547166	155547477	.	-	0	Parent=FBgn0037667.1.mrna1;Target=FBgn0037667.1 811 1122 +
Chr2	stalkie_big_nohaplotig	CDS	155547538	155547693	.	-	0	Parent=FBgn0037667.1.mrna1;Target=FBgn0037667.1 655 810 +
Chr2	stalkie_big_nohaplotig	CDS	155547758	155547898	.	-	0	Parent=FBgn0037667.1.mrna1;Target=FBgn0037667.1 514 654 +
Chr2	stalkie_big_nohaplotig	CDS	155547956	155548183	.	-	0	Parent=FBgn0037667.1.mrna1;Target=FBgn0037667.1 286 513 +
Chr2	stalkie_big_nohaplotig	CDS	155548246	155548530	.	-	0	Parent=FBgn0037667.1.mrna1;Target=FBgn0037667.1 1 285 +
Chr2	gffcl	locus	155550849	155552143	.	-	.	ID=RLOC_00023012;geneIDs=FBgn0037671.1.path1;transcripts=FBgn0037671.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155550849	155552143	.	-	.	ID=FBgn0037671.1.mrna1;geneID=FBgn0037671.1.path1;Name=FBgn0037671.1;Dir=sensecoverage=100.0;identity=99.1;matches=954;mismatches=9;indels=0;unknowns=0;locus=RLOC_00023012
Chr2	stalkie_big_nohaplotig	exon	155550849	155551031	98	-	.	Parent=FBgn0037671.1.mrna1;Target=FBgn0037671.1 781 963 +
Chr2	stalkie_big_nohaplotig	exon	155551093	155551473	99	-	.	Parent=FBgn0037671.1.mrna1;Target=FBgn0037671.1 400 780 +
Chr2	stalkie_big_nohaplotig	exon	155551534	155551886	99	-	.	Parent=FBgn0037671.1.mrna1;Target=FBgn0037671.1 47 399 +
Chr2	stalkie_big_nohaplotig	exon	155552098	155552143	97	-	.	Parent=FBgn0037671.1.mrna1;Target=FBgn0037671.1 1 46 +
Chr2	stalkie_big_nohaplotig	CDS	155550849	155551031	.	-	0	Parent=FBgn0037671.1.mrna1;Target=FBgn0037671.1 781 963 +
Chr2	stalkie_big_nohaplotig	CDS	155551093	155551473	.	-	0	Parent=FBgn0037671.1.mrna1;Target=FBgn0037671.1 400 780 +
Chr2	stalkie_big_nohaplotig	CDS	155551534	155551886	.	-	2	Parent=FBgn0037671.1.mrna1;Target=FBgn0037671.1 47 399 +
Chr2	stalkie_big_nohaplotig	CDS	155552098	155552143	.	-	0	Parent=FBgn0037671.1.mrna1;Target=FBgn0037671.1 1 46 +
Chr2	gffcl	locus	155552619	155554490	.	+	.	ID=RLOC_00023013;geneIDs=FBgn0038666.1.path1;transcripts=FBgn0038666.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155552619	155554490	.	+	.	ID=FBgn0038666.1.mrna1;geneID=FBgn0038666.1.path1;Name=FBgn0038666.1;Dir=sensecoverage=100.0;identity=99.4;matches=1541;mismatches=10;indels=0;unknowns=0;locus=RLOC_00023013
Chr2	stalkie_big_nohaplotig	exon	155552619	155552668	98	+	.	Parent=FBgn0038666.1.mrna1;Target=FBgn0038666.1 1 50 +
Chr2	stalkie_big_nohaplotig	exon	155552725	155552791	100	+	.	Parent=FBgn0038666.1.mrna1;Target=FBgn0038666.1 51 117 +
Chr2	stalkie_big_nohaplotig	exon	155552851	155553109	98	+	.	Parent=FBgn0038666.1.mrna1;Target=FBgn0038666.1 118 376 +
Chr2	stalkie_big_nohaplotig	exon	155553183	155553869	99	+	.	Parent=FBgn0038666.1.mrna1;Target=FBgn0038666.1 377 1063 +
Chr2	stalkie_big_nohaplotig	exon	155553930	155554321	99	+	.	Parent=FBgn0038666.1.mrna1;Target=FBgn0038666.1 1064 1455 +
Chr2	stalkie_big_nohaplotig	exon	155554395	155554490	100	+	.	Parent=FBgn0038666.1.mrna1;Target=FBgn0038666.1 1456 1551 +
Chr2	stalkie_big_nohaplotig	CDS	155552619	155552668	.	+	0	Parent=FBgn0038666.1.mrna1;Target=FBgn0038666.1 1 50 +
Chr2	stalkie_big_nohaplotig	CDS	155552725	155552791	.	+	1	Parent=FBgn0038666.1.mrna1;Target=FBgn0038666.1 51 117 +
Chr2	stalkie_big_nohaplotig	CDS	155552851	155553109	.	+	0	Parent=FBgn0038666.1.mrna1;Target=FBgn0038666.1 118 376 +
Chr2	stalkie_big_nohaplotig	CDS	155553183	155553869	.	+	2	Parent=FBgn0038666.1.mrna1;Target=FBgn0038666.1 377 1063 +
Chr2	stalkie_big_nohaplotig	CDS	155553930	155554321	.	+	2	Parent=FBgn0038666.1.mrna1;Target=FBgn0038666.1 1064 1455 +
Chr2	stalkie_big_nohaplotig	CDS	155554395	155554490	.	+	0	Parent=FBgn0038666.1.mrna1;Target=FBgn0038666.1 1456 1551 +
Chr2	gffcl	locus	155554958	155555448	.	+	.	ID=RLOC_00023014;geneIDs=FBgn0038665.1.path1;transcripts=FBgn0038665.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155554958	155555448	.	+	.	ID=FBgn0038665.1.mrna1;geneID=FBgn0038665.1.path1;Name=FBgn0038665.1;Dir=sensecoverage=100.0;identity=100.0;matches=339;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023014
Chr2	stalkie_big_nohaplotig	exon	155554958	155555090	100	+	.	Parent=FBgn0038665.1.mrna1;Target=FBgn0038665.1 1 133 +
Chr2	stalkie_big_nohaplotig	exon	155555179	155555309	100	+	.	Parent=FBgn0038665.1.mrna1;Target=FBgn0038665.1 134 264 +
Chr2	stalkie_big_nohaplotig	exon	155555374	155555448	100	+	.	Parent=FBgn0038665.1.mrna1;Target=FBgn0038665.1 265 339 +
Chr2	stalkie_big_nohaplotig	CDS	155554958	155555090	.	+	0	Parent=FBgn0038665.1.mrna1;Target=FBgn0038665.1 1 133 +
Chr2	stalkie_big_nohaplotig	CDS	155555179	155555309	.	+	2	Parent=FBgn0038665.1.mrna1;Target=FBgn0038665.1 134 264 +
Chr2	stalkie_big_nohaplotig	CDS	155555374	155555448	.	+	0	Parent=FBgn0038665.1.mrna1;Target=FBgn0038665.1 265 339 +
Chr2	gffcl	locus	155556856	155561091	.	-	.	ID=RLOC_00023015;geneIDs=comp160110_c0_seq1.path1;transcripts=comp160110_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155556856	155561091	.	-	.	ID=comp160110_c0_seq1.mrna1;geneID=comp160110_c0_seq1.path1;Name=comp160110_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.6;matches=3817;mismatches=32;indels=22;unknowns=0;Target=comp160110_c0_seq1 915 796 .;locus=RLOC_00023015
Chr2	stalkie_big_nohaplotig	exon	155556856	155559008	98	-	.	Parent=comp160110_c0_seq1.mrna1;Target=comp160110_c0_seq1 3860 1706 .
Chr2	stalkie_big_nohaplotig	exon	155559315	155559594	96	-	.	Parent=comp160110_c0_seq1.mrna1;Target=comp160110_c0_seq1 1705 1426 .
Chr2	stalkie_big_nohaplotig	exon	155559657	155561091	98	-	.	Parent=comp160110_c0_seq1.mrna1;Target=comp160110_c0_seq1 1425 9 .
Chr2	stalkie_big_nohaplotig	CDS	155560184	155560303	.	-	0	Parent=comp160110_c0_seq1.mrna1
Chr2	gffcl	locus	155563529	155643492	.	-	.	ID=RLOC_00023016;geneIDs=FBgn0261262.1.path1,comp161458_c2_seq1.path1;transcripts=FBgn0261262.1.mrna1,comp161458_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155563529	155605601	.	-	.	ID=FBgn0261262.1.mrna1;geneID=FBgn0261262.1.path1;Name=FBgn0261262.1;Dir=sensecoverage=99.4;identity=99.8;matches=2466;mismatches=4;indels=0;unknowns=0;locus=RLOC_00023016
Chr2	stalkie_big_nohaplotig	exon	155563529	155563708	100	-	.	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 2291 2470 +
Chr2	stalkie_big_nohaplotig	exon	155568785	155568962	100	-	.	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 2113 2290 +
Chr2	stalkie_big_nohaplotig	exon	155569800	155569969	100	-	.	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 1943 2112 +
Chr2	stalkie_big_nohaplotig	exon	155570057	155570457	99	-	.	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 1542 1942 +
Chr2	stalkie_big_nohaplotig	exon	155571007	155571435	99	-	.	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 1113 1541 +
Chr2	stalkie_big_nohaplotig	exon	155571510	155571611	100	-	.	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 1011 1112 +
Chr2	stalkie_big_nohaplotig	exon	155571688	155571814	99	-	.	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 884 1010 +
Chr2	stalkie_big_nohaplotig	exon	155573775	155573992	100	-	.	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 666 883 +
Chr2	stalkie_big_nohaplotig	exon	155574290	155574503	100	-	.	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 452 665 +
Chr2	stalkie_big_nohaplotig	exon	155574624	155574835	100	-	.	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 240 451 +
Chr2	stalkie_big_nohaplotig	exon	155576238	155576264	100	-	.	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 213 239 +
Chr2	stalkie_big_nohaplotig	exon	155576349	155576526	100	-	.	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 35 212 +
Chr2	stalkie_big_nohaplotig	exon	155605568	155605601	100	-	.	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 1 34 +
Chr2	stalkie_big_nohaplotig	CDS	155563530	155563708	.	-	2	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 2291 2469 +
Chr2	stalkie_big_nohaplotig	CDS	155568785	155568962	.	-	0	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 2113 2290 +
Chr2	stalkie_big_nohaplotig	CDS	155569800	155569969	.	-	2	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 1943 2112 +
Chr2	stalkie_big_nohaplotig	CDS	155570057	155570457	.	-	1	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 1542 1942 +
Chr2	stalkie_big_nohaplotig	CDS	155571007	155571435	.	-	1	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 1113 1541 +
Chr2	stalkie_big_nohaplotig	CDS	155571510	155571611	.	-	1	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 1011 1112 +
Chr2	stalkie_big_nohaplotig	CDS	155571688	155571814	.	-	2	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 884 1010 +
Chr2	stalkie_big_nohaplotig	CDS	155573775	155573992	.	-	1	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 666 883 +
Chr2	stalkie_big_nohaplotig	CDS	155574290	155574503	.	-	2	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 452 665 +
Chr2	stalkie_big_nohaplotig	CDS	155574624	155574835	.	-	1	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 240 451 +
Chr2	stalkie_big_nohaplotig	CDS	155576238	155576264	.	-	1	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 213 239 +
Chr2	stalkie_big_nohaplotig	CDS	155576349	155576526	.	-	2	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 35 212 +
Chr2	stalkie_big_nohaplotig	CDS	155605568	155605601	.	-	0	Parent=FBgn0261262.1.mrna1;Target=FBgn0261262.1 1 34 +
Chr2	stalkie_big_nohaplotig	mRNA	155568783	155643492	.	-	.	ID=comp161458_c2_seq1.mrna1;geneID=comp161458_c2_seq1.path1;Name=comp161458_c2_seq1;Dir=antisensecoverage=100.0;identity=99.9;matches=2770;mismatches=4;indels=0;unknowns=0;locus=RLOC_00023016
Chr2	stalkie_big_nohaplotig	exon	155568783	155568962	100	-	.	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 1 180 -
Chr2	stalkie_big_nohaplotig	exon	155569800	155569969	100	-	.	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 181 350 -
Chr2	stalkie_big_nohaplotig	exon	155570057	155570457	99	-	.	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 351 751 -
Chr2	stalkie_big_nohaplotig	exon	155571007	155571435	99	-	.	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 752 1180 -
Chr2	stalkie_big_nohaplotig	exon	155571510	155571611	100	-	.	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 1181 1282 -
Chr2	stalkie_big_nohaplotig	exon	155571688	155571814	99	-	.	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 1283 1409 -
Chr2	stalkie_big_nohaplotig	exon	155573775	155573992	100	-	.	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 1410 1627 -
Chr2	stalkie_big_nohaplotig	exon	155574290	155574503	100	-	.	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 1628 1841 -
Chr2	stalkie_big_nohaplotig	exon	155574624	155574835	100	-	.	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 1842 2053 -
Chr2	stalkie_big_nohaplotig	exon	155576238	155576264	100	-	.	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 2054 2080 -
Chr2	stalkie_big_nohaplotig	exon	155576349	155576526	100	-	.	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 2081 2258 -
Chr2	stalkie_big_nohaplotig	exon	155642977	155643492	100	-	.	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 2259 2774 -
Chr2	stalkie_big_nohaplotig	CDS	155568783	155568962	.	-	0	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 1 180 .
Chr2	stalkie_big_nohaplotig	CDS	155569800	155569969	.	-	2	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 181 350 .
Chr2	stalkie_big_nohaplotig	CDS	155570057	155570457	.	-	1	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 351 751 .
Chr2	stalkie_big_nohaplotig	CDS	155571007	155571435	.	-	1	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 752 1180 .
Chr2	stalkie_big_nohaplotig	CDS	155571510	155571611	.	-	1	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 1181 1282 .
Chr2	stalkie_big_nohaplotig	CDS	155571688	155571814	.	-	2	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 1283 1409 .
Chr2	stalkie_big_nohaplotig	CDS	155573775	155573992	.	-	1	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 1410 1627 .
Chr2	stalkie_big_nohaplotig	CDS	155574290	155574503	.	-	2	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 1628 1841 .
Chr2	stalkie_big_nohaplotig	CDS	155574624	155574835	.	-	1	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 1842 2053 .
Chr2	stalkie_big_nohaplotig	CDS	155576238	155576264	.	-	1	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 2054 2080 .
Chr2	stalkie_big_nohaplotig	CDS	155576349	155576526	.	-	2	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 2081 2258 .
Chr2	stalkie_big_nohaplotig	CDS	155642977	155643490	.	-	0	Parent=comp161458_c2_seq1.mrna1;Target=comp161458_c2_seq1 2259 2772 .
Chr2	gffcl	locus	155563957	155564461	.	+	.	ID=RLOC_00023017;geneIDs=comp143144_c1_seq1.path1;transcripts=comp143144_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155563957	155564461	.	+	.	ID=comp143144_c1_seq1.mrna1;geneID=comp143144_c1_seq1.path1;Name=comp143144_c1_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=498;mismatches=3;indels=4;unknowns=0;Target=comp143144_c1_seq1 501 1 .;CDS_Target=comp143144_c1_seq1 233 144 .;locus=RLOC_00023017
Chr2	stalkie_big_nohaplotig	exon	155563957	155564461	98	+	.	Parent=comp143144_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155564103	155564192	.	+	0	Parent=comp143144_c1_seq1.mrna1
Chr2	gffcl	locus	155606261	155606642	.	+	.	ID=RLOC_00023018;geneIDs=comp134983_c0_seq1.path1;transcripts=comp134983_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155606261	155606642	.	+	.	ID=comp134983_c0_seq1.mrna1;geneID=comp134983_c0_seq1.path1;Name=comp134983_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=382;mismatches=0;indels=0;unknowns=0;Target=comp134983_c0_seq1 382 1 .;CDS_Target=comp134983_c0_seq1 248 69 .;locus=RLOC_00023018
Chr2	stalkie_big_nohaplotig	exon	155606261	155606642	100	+	.	Parent=comp134983_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155606329	155606508	.	+	0	Parent=comp134983_c0_seq1.mrna1
Chr2	gffcl	locus	155668014	155669193	.	+	.	ID=RLOC_00023019;geneIDs=comp150135_c0_seq1.path1;transcripts=comp150135_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155668014	155669193	.	+	.	ID=comp150135_c0_seq1.mrna1;geneID=comp150135_c0_seq1.path1;Name=comp150135_c0_seq1;Dir=indeterminatecoverage=99.8;identity=97.6;matches=1153;mismatches=9;indels=19;unknowns=0;Target=comp150135_c0_seq1 1164 2 .;CDS_Target=comp150135_c0_seq1 519 394 .;locus=RLOC_00023019
Chr2	stalkie_big_nohaplotig	exon	155668014	155669193	97	+	.	Parent=comp150135_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155668405	155668548	.	+	0	Parent=comp150135_c0_seq1.mrna1
Chr2	gffcl	locus	155671328	155694010	.	.	.	ID=RLOC_00023020;geneIDs=comp145144_c0_seq1.path1,comp151296_c1_seq1.path1;transcripts=comp145144_c0_seq1.mrna1,comp151296_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155671328	155694010	.	-	.	ID=comp145144_c0_seq1.mrna1;geneID=comp145144_c0_seq1.path1;Name=comp145144_c0_seq1;Dir=indeterminatecoverage=87.5;identity=94.5;matches=310;mismatches=9;indels=9;unknowns=0;Target=comp145144_c0_seq1 248 3 .;locus=RLOC_00023020
Chr2	stalkie_big_nohaplotig	exon	155671328	155671336	100	-	.	Parent=comp145144_c0_seq1.mrna1;Target=comp145144_c0_seq1 323 315 .
Chr2	stalkie_big_nohaplotig	exon	155676359	155676368	100	-	.	Parent=comp145144_c0_seq1.mrna1;Target=comp145144_c0_seq1 314 305 .
Chr2	stalkie_big_nohaplotig	exon	155690540	155690570	61	-	.	Parent=comp145144_c0_seq1.mrna1;Target=comp145144_c0_seq1 304 279 .
Chr2	stalkie_big_nohaplotig	exon	155693737	155694010	97	-	.	Parent=comp145144_c0_seq1.mrna1;Target=comp145144_c0_seq1 278 1 .
Chr2	stalkie_big_nohaplotig	CDS	155693767	155694008	.	-	0	Parent=comp145144_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155693132	155693763	.	+	.	ID=comp151296_c1_seq1.mrna1;geneID=comp151296_c1_seq1.path1;Name=comp151296_c1_seq1;Dir=indeterminatecoverage=69.5;identity=99.8;matches=631;mismatches=1;indels=0;unknowns=0;Target=comp151296_c1_seq1 910 279 .;CDS_Target=comp151296_c1_seq1 325 281 .;locus=RLOC_00023020
Chr2	stalkie_big_nohaplotig	exon	155693132	155693763	99	+	.	Parent=comp151296_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155693134	155693178	.	+	0	Parent=comp151296_c1_seq1.mrna1
Chr2	gffcl	locus	155686529	155688415	.	+	.	ID=RLOC_00023021;geneIDs=FBgn0038662.2.path1;transcripts=FBgn0038662.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155686529	155688415	.	+	.	ID=FBgn0038662.2.mrna1;geneID=FBgn0038662.2.path1;Name=FBgn0038662.2;Dir=sensecoverage=100.0;identity=100.0;matches=381;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023021
Chr2	stalkie_big_nohaplotig	exon	155686529	155686632	100	+	.	Parent=FBgn0038662.2.mrna1;Target=FBgn0038662.2 1 104 +
Chr2	stalkie_big_nohaplotig	exon	155686698	155686798	100	+	.	Parent=FBgn0038662.2.mrna1;Target=FBgn0038662.2 105 205 +
Chr2	stalkie_big_nohaplotig	exon	155688240	155688415	100	+	.	Parent=FBgn0038662.2.mrna1;Target=FBgn0038662.2 206 381 +
Chr2	stalkie_big_nohaplotig	CDS	155686529	155686632	.	+	0	Parent=FBgn0038662.2.mrna1;Target=FBgn0038662.2 1 104 +
Chr2	stalkie_big_nohaplotig	CDS	155686698	155686798	.	+	1	Parent=FBgn0038662.2.mrna1;Target=FBgn0038662.2 105 205 +
Chr2	stalkie_big_nohaplotig	CDS	155688240	155688415	.	+	2	Parent=FBgn0038662.2.mrna1;Target=FBgn0038662.2 206 381 +
Chr2	gffcl	locus	155695599	155695962	.	+	.	ID=RLOC_00023022;geneIDs=comp46463_c0_seq1.path1;transcripts=comp46463_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155695599	155695962	.	+	.	ID=comp46463_c0_seq1.mrna1;geneID=comp46463_c0_seq1.path1;Name=comp46463_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=364;mismatches=0;indels=0;unknowns=0;Target=comp46463_c0_seq1 364 1 .;CDS_Target=comp46463_c0_seq1 68 3 .;locus=RLOC_00023022
Chr2	stalkie_big_nohaplotig	exon	155695599	155695962	100	+	.	Parent=comp46463_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155695601	155695666	.	+	0	Parent=comp46463_c0_seq1.mrna1
Chr2	gffcl	locus	155696700	155697238	.	+	.	ID=RLOC_00023023;geneIDs=comp113104_c1_seq1.path1;transcripts=comp113104_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155696700	155697238	.	+	.	ID=comp113104_c1_seq1.mrna1;geneID=comp113104_c1_seq1.path1;Name=comp113104_c1_seq1;Dir=indeterminatecoverage=98.5;identity=100.0;matches=539;mismatches=0;indels=0;unknowns=0;Target=comp113104_c1_seq1 547 9 .;CDS_Target=comp113104_c1_seq1 161 66 .;locus=RLOC_00023023
Chr2	stalkie_big_nohaplotig	exon	155696700	155697238	100	+	.	Parent=comp113104_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155696757	155696852	.	+	0	Parent=comp113104_c1_seq1.mrna1
Chr2	gffcl	locus	155697240	155705621	.	-	.	ID=RLOC_00023024;geneIDs=comp149363_c1_seq1.path1;transcripts=comp149363_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155697240	155705621	.	-	.	ID=comp149363_c1_seq1.mrna1;geneID=comp149363_c1_seq1.path1;Name=comp149363_c1_seq1;Dir=indeterminatecoverage=90.0;identity=95.0;matches=284;mismatches=1;indels=14;unknowns=0;locus=RLOC_00023024
Chr2	stalkie_big_nohaplotig	exon	155697240	155697497	100	-	.	Parent=comp149363_c1_seq1.mrna1;Target=comp149363_c1_seq1 340 83 .
Chr2	stalkie_big_nohaplotig	exon	155700547	155700556	100	-	.	Parent=comp149363_c1_seq1.mrna1;Target=comp149363_c1_seq1 75 66 .
Chr2	stalkie_big_nohaplotig	exon	155705454	155705461	100	-	.	Parent=comp149363_c1_seq1.mrna1;Target=comp149363_c1_seq1 65 58 .
Chr2	stalkie_big_nohaplotig	exon	155705613	155705621	34	-	.	Parent=comp149363_c1_seq1.mrna1;Target=comp149363_c1_seq1 57 35 .
Chr2	stalkie_big_nohaplotig	CDS	155697458	155697497	.	-	1	Parent=comp149363_c1_seq1.mrna1;Target=comp149363_c1_seq1 122 83 .
Chr2	stalkie_big_nohaplotig	CDS	155700547	155700556	.	-	2	Parent=comp149363_c1_seq1.mrna1;Target=comp149363_c1_seq1 75 66 .
Chr2	stalkie_big_nohaplotig	CDS	155705454	155705461	.	-	1	Parent=comp149363_c1_seq1.mrna1;Target=comp149363_c1_seq1 65 58 .
Chr2	stalkie_big_nohaplotig	CDS	155705613	155705620	.	-	0	Parent=comp149363_c1_seq1.mrna1;Target=comp149363_c1_seq1 57 36 .
Chr2	gffcl	locus	155698720	155801591	.	.	.	ID=RLOC_00023025;geneIDs=FBgn0038826.1.path1,comp140507_c1_seq1.path1,comp156428_c0_seq1.path1;transcripts=FBgn0038826.1.mrna1,comp156428_c0_seq1.mrna1,comp140507_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155698720	155800161	.	-	.	ID=FBgn0038826.1.mrna1;geneID=FBgn0038826.1.path1;Name=FBgn0038826.1;Dir=sensecoverage=100.0;identity=99.9;matches=1828;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023025
Chr2	stalkie_big_nohaplotig	exon	155698720	155698892	100	-	.	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 1658 1830 +
Chr2	stalkie_big_nohaplotig	exon	155713859	155713962	100	-	.	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 1554 1657 +
Chr2	stalkie_big_nohaplotig	exon	155714280	155714386	100	-	.	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 1447 1553 +
Chr2	stalkie_big_nohaplotig	exon	155714459	155714599	100	-	.	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 1306 1446 +
Chr2	stalkie_big_nohaplotig	exon	155714679	155714807	99	-	.	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 1177 1305 +
Chr2	stalkie_big_nohaplotig	exon	155716164	155716297	100	-	.	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 1043 1176 +
Chr2	stalkie_big_nohaplotig	exon	155724099	155724234	100	-	.	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 907 1042 +
Chr2	stalkie_big_nohaplotig	exon	155726012	155726253	100	-	.	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 665 906 +
Chr2	stalkie_big_nohaplotig	exon	155726402	155726723	99	-	.	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 343 664 +
Chr2	stalkie_big_nohaplotig	exon	155727488	155727618	100	-	.	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 212 342 +
Chr2	stalkie_big_nohaplotig	exon	155788441	155788461	100	-	.	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 191 211 +
Chr2	stalkie_big_nohaplotig	exon	155799972	155800161	100	-	.	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 1 190 +
Chr2	stalkie_big_nohaplotig	CDS	155698720	155698892	.	-	2	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 1658 1830 +
Chr2	stalkie_big_nohaplotig	CDS	155713859	155713962	.	-	1	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 1554 1657 +
Chr2	stalkie_big_nohaplotig	CDS	155714280	155714386	.	-	0	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 1447 1553 +
Chr2	stalkie_big_nohaplotig	CDS	155714459	155714599	.	-	0	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 1306 1446 +
Chr2	stalkie_big_nohaplotig	CDS	155714679	155714807	.	-	0	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 1177 1305 +
Chr2	stalkie_big_nohaplotig	CDS	155716164	155716297	.	-	2	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 1043 1176 +
Chr2	stalkie_big_nohaplotig	CDS	155724099	155724234	.	-	0	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 907 1042 +
Chr2	stalkie_big_nohaplotig	CDS	155726012	155726253	.	-	2	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 665 906 +
Chr2	stalkie_big_nohaplotig	CDS	155726402	155726723	.	-	0	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 343 664 +
Chr2	stalkie_big_nohaplotig	CDS	155727488	155727618	.	-	2	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 212 342 +
Chr2	stalkie_big_nohaplotig	CDS	155788441	155788461	.	-	2	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 191 211 +
Chr2	stalkie_big_nohaplotig	CDS	155799972	155800161	.	-	0	Parent=FBgn0038826.1.mrna1;Target=FBgn0038826.1 1 190 +
Chr2	stalkie_big_nohaplotig	mRNA	155701275	155801591	.	-	.	ID=comp156428_c0_seq1.mrna1;geneID=comp156428_c0_seq1.path1;Name=comp156428_c0_seq1;Dir=sensecoverage=99.7;identity=99.9;matches=4116;mismatches=3;indels=1;unknowns=0;locus=RLOC_00023025
Chr2	stalkie_big_nohaplotig	exon	155701275	155702309	99	-	.	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 3085 4120 +
Chr2	stalkie_big_nohaplotig	exon	155711588	155711952	99	-	.	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 2720 3084 +
Chr2	stalkie_big_nohaplotig	exon	155713859	155713986	100	-	.	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 2592 2719 +
Chr2	stalkie_big_nohaplotig	exon	155714280	155714386	100	-	.	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 2485 2591 +
Chr2	stalkie_big_nohaplotig	exon	155714459	155714599	100	-	.	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 2344 2484 +
Chr2	stalkie_big_nohaplotig	exon	155714679	155714807	99	-	.	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 2215 2343 +
Chr2	stalkie_big_nohaplotig	exon	155716164	155716297	100	-	.	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 2081 2214 +
Chr2	stalkie_big_nohaplotig	exon	155724099	155724234	100	-	.	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 1945 2080 +
Chr2	stalkie_big_nohaplotig	exon	155726012	155726253	100	-	.	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 1703 1944 +
Chr2	stalkie_big_nohaplotig	exon	155726402	155726723	99	-	.	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 1381 1702 +
Chr2	stalkie_big_nohaplotig	exon	155727488	155727618	100	-	.	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 1250 1380 +
Chr2	stalkie_big_nohaplotig	exon	155788441	155788461	100	-	.	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 1229 1249 +
Chr2	stalkie_big_nohaplotig	exon	155799972	155800336	100	-	.	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 864 1228 +
Chr2	stalkie_big_nohaplotig	exon	155800661	155801146	100	-	.	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 378 863 +
Chr2	stalkie_big_nohaplotig	exon	155801215	155801591	100	-	.	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 1 377 +
Chr2	stalkie_big_nohaplotig	CDS	155702295	155702309	.	-	0	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 3085 3099 +
Chr2	stalkie_big_nohaplotig	CDS	155711588	155711952	.	-	2	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 2720 3084 +
Chr2	stalkie_big_nohaplotig	CDS	155713859	155713986	.	-	1	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 2592 2719 +
Chr2	stalkie_big_nohaplotig	CDS	155714280	155714386	.	-	0	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 2485 2591 +
Chr2	stalkie_big_nohaplotig	CDS	155714459	155714599	.	-	0	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 2344 2484 +
Chr2	stalkie_big_nohaplotig	CDS	155714679	155714807	.	-	0	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 2215 2343 +
Chr2	stalkie_big_nohaplotig	CDS	155716164	155716297	.	-	2	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 2081 2214 +
Chr2	stalkie_big_nohaplotig	CDS	155724099	155724234	.	-	0	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 1945 2080 +
Chr2	stalkie_big_nohaplotig	CDS	155726012	155726253	.	-	2	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 1703 1944 +
Chr2	stalkie_big_nohaplotig	CDS	155726402	155726723	.	-	0	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 1381 1702 +
Chr2	stalkie_big_nohaplotig	CDS	155727488	155727618	.	-	2	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 1250 1380 +
Chr2	stalkie_big_nohaplotig	CDS	155788441	155788461	.	-	2	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 1229 1249 +
Chr2	stalkie_big_nohaplotig	CDS	155799972	155800023	.	-	0	Parent=comp156428_c0_seq1.mrna1;Target=comp156428_c0_seq1 1177 1228 +
Chr2	stalkie_big_nohaplotig	mRNA	155723648	155724121	.	+	.	ID=comp140507_c1_seq1.mrna1;geneID=comp140507_c1_seq1.path1;Name=comp140507_c1_seq1;Dir=indeterminatecoverage=99.6;identity=99.8;matches=474;mismatches=0;indels=1;unknowns=0;Target=comp140507_c1_seq1 477 3 .;CDS_Target=comp140507_c1_seq1 431 315 .;locus=RLOC_00023025
Chr2	stalkie_big_nohaplotig	exon	155723648	155724121	99	+	.	Parent=comp140507_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155723959	155724075	.	+	0	Parent=comp140507_c1_seq1.mrna1
Chr2	gffcl	locus	155702543	155704464	.	-	.	ID=RLOC_00023026;geneIDs=comp153408_c0_seq1.path1;transcripts=comp153408_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155702543	155704464	.	-	.	ID=comp153408_c0_seq1.mrna1;geneID=comp153408_c0_seq1.path1;Name=comp153408_c0_seq1;Dir=indeterminatecoverage=99.1;identity=100.0;matches=1922;mismatches=0;indels=0;unknowns=0;Target=comp153408_c0_seq1 1940 19 .;CDS_Target=comp153408_c0_seq1 1201 1004 .;locus=RLOC_00023026
Chr2	stalkie_big_nohaplotig	exon	155702543	155704464	100	-	.	Parent=comp153408_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155703282	155703479	.	-	0	Parent=comp153408_c0_seq1.mrna1
Chr2	gffcl	locus	155709795	155710574	.	+	.	ID=RLOC_00023027;geneIDs=comp143481_c0_seq1.path1;transcripts=comp143481_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155709795	155710574	.	+	.	ID=comp143481_c0_seq1.mrna1;geneID=comp143481_c0_seq1.path1;Name=comp143481_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=780;mismatches=0;indels=0;unknowns=0;Target=comp143481_c0_seq1 781 2 .;CDS_Target=comp143481_c0_seq1 607 476 .;locus=RLOC_00023027
Chr2	stalkie_big_nohaplotig	exon	155709795	155710574	100	+	.	Parent=comp143481_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155710269	155710400	.	+	0	Parent=comp143481_c0_seq1.mrna1
Chr2	gffcl	locus	155717773	155718398	.	+	.	ID=RLOC_00023028;geneIDs=comp116305_c1_seq1.path1;transcripts=comp116305_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155717773	155718398	.	+	.	ID=comp116305_c1_seq1.mrna1;geneID=comp116305_c1_seq1.path1;Name=comp116305_c1_seq1;Dir=indeterminatecoverage=97.2;identity=100.0;matches=626;mismatches=0;indels=0;unknowns=0;Target=comp116305_c1_seq1 626 1 .;CDS_Target=comp116305_c1_seq1 522 346 .;locus=RLOC_00023028
Chr2	stalkie_big_nohaplotig	exon	155717773	155718398	100	+	.	Parent=comp116305_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155718118	155718294	.	+	0	Parent=comp116305_c1_seq1.mrna1
Chr2	gffcl	locus	155720422	155721014	.	-	.	ID=RLOC_00023029;geneIDs=comp151419_c0_seq1.path1;transcripts=comp151419_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155720422	155721014	.	-	.	ID=comp151419_c0_seq1.mrna1;geneID=comp151419_c0_seq1.path1;Name=comp151419_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=589;mismatches=4;indels=0;unknowns=0;Target=comp151419_c0_seq1 593 1 .;CDS_Target=comp151419_c0_seq1 131 3 .;locus=RLOC_00023029
Chr2	stalkie_big_nohaplotig	exon	155720422	155721014	99	-	.	Parent=comp151419_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155720884	155721012	.	-	0	Parent=comp151419_c0_seq1.mrna1
Chr2	gffcl	locus	155738985	155739910	.	+	.	ID=RLOC_00023030;geneIDs=comp143663_c0_seq1.path1;transcripts=comp143663_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155738985	155739910	.	+	.	ID=comp143663_c0_seq1.mrna1;geneID=comp143663_c0_seq1.path1;Name=comp143663_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=746;mismatches=0;indels=0;unknowns=0;Target=comp143663_c0_seq1 564 692 +;locus=RLOC_00023030
Chr2	stalkie_big_nohaplotig	exon	155738985	155739110	100	+	.	Parent=comp143663_c0_seq1.mrna1;Target=comp143663_c0_seq1 1 126 +
Chr2	stalkie_big_nohaplotig	exon	155739225	155739520	100	+	.	Parent=comp143663_c0_seq1.mrna1;Target=comp143663_c0_seq1 127 422 +
Chr2	stalkie_big_nohaplotig	exon	155739587	155739910	100	+	.	Parent=comp143663_c0_seq1.mrna1;Target=comp143663_c0_seq1 423 746 +
Chr2	stalkie_big_nohaplotig	CDS	155739728	155739856	.	+	0	Parent=comp143663_c0_seq1.mrna1
Chr2	gffcl	locus	155740239	155740725	.	+	.	ID=RLOC_00023031;geneIDs=comp224262_c0_seq1.path1;transcripts=comp224262_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155740239	155740725	.	+	.	ID=comp224262_c0_seq1.mrna1;geneID=comp224262_c0_seq1.path1;Name=comp224262_c0_seq1;Dir=indeterminatecoverage=93.8;identity=100.0;matches=487;mismatches=0;indels=0;unknowns=0;Target=comp224262_c0_seq1 510 24 .;CDS_Target=comp224262_c0_seq1 398 294 .;locus=RLOC_00023031
Chr2	stalkie_big_nohaplotig	exon	155740239	155740725	100	+	.	Parent=comp224262_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155740509	155740613	.	+	0	Parent=comp224262_c0_seq1.mrna1
Chr2	gffcl	locus	155748850	155749441	.	-	.	ID=RLOC_00023032;geneIDs=comp113934_c0_seq1.path1;transcripts=comp113934_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155748850	155749441	.	-	.	ID=comp113934_c0_seq1.mrna1;geneID=comp113934_c0_seq1.path1;Name=comp113934_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=589;mismatches=3;indels=1;unknowns=0;Target=comp113934_c0_seq1 593 1 .;CDS_Target=comp113934_c0_seq1 81 1 .;locus=RLOC_00023032
Chr2	stalkie_big_nohaplotig	exon	155748850	155749441	99	-	.	Parent=comp113934_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155749361	155749441	.	-	0	Parent=comp113934_c0_seq1.mrna1
Chr2	gffcl	locus	155749880	155750405	.	-	.	ID=RLOC_00023033;geneIDs=comp136482_c0_seq1.path1;transcripts=comp136482_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155749880	155750405	.	-	.	ID=comp136482_c0_seq1.mrna1;geneID=comp136482_c0_seq1.path1;Name=comp136482_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.5;matches=518;mismatches=1;indels=7;unknowns=0;Target=comp136482_c0_seq1 520 2 .;CDS_Target=comp136482_c0_seq1 212 111 .;locus=RLOC_00023033
Chr2	stalkie_big_nohaplotig	exon	155749880	155750405	98	-	.	Parent=comp136482_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155750188	155750296	.	-	0	Parent=comp136482_c0_seq1.mrna1
Chr2	gffcl	locus	155805139	155805365	.	-	.	ID=RLOC_00023035;geneIDs=comp155275_c1_seq1.path2;transcripts=comp155275_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	155805139	155805365	.	-	.	ID=comp155275_c1_seq1.mrna2;geneID=comp155275_c1_seq1.path2;Name=comp155275_c1_seq1;Dir=indeterminatecoverage=23.9;identity=100.0;matches=227;mismatches=0;indels=0;unknowns=0;Target=comp155275_c1_seq1 948 722 .;locus=RLOC_00023035
Chr2	stalkie_big_nohaplotig	exon	155805139	155805365	100	-	.	Parent=comp155275_c1_seq1.mrna2
Chr2	gffcl	locus	155806557	155807342	.	-	.	ID=RLOC_00023036;geneIDs=comp150373_c0_seq1.path1;transcripts=comp150373_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155806557	155807342	.	-	.	ID=comp150373_c0_seq1.mrna1;geneID=comp150373_c0_seq1.path1;Name=comp150373_c0_seq1;Dir=indeterminatecoverage=97.5;identity=100.0;matches=786;mismatches=0;indels=0;unknowns=0;Target=comp150373_c0_seq1 806 21 .;CDS_Target=comp150373_c0_seq1 139 23 .;locus=RLOC_00023036
Chr2	stalkie_big_nohaplotig	exon	155806557	155807342	100	-	.	Parent=comp150373_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155807224	155807340	.	-	0	Parent=comp150373_c0_seq1.mrna1
Chr2	gffcl	locus	155807431	155807995	.	+	.	ID=RLOC_00023037;geneIDs=comp143787_c0_seq1.path1;transcripts=comp143787_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155807431	155807995	.	+	.	ID=comp143787_c0_seq1.mrna1;geneID=comp143787_c0_seq1.path1;Name=comp143787_c0_seq1;Dir=indeterminatecoverage=88.9;identity=99.6;matches=565;mismatches=0;indels=2;unknowns=0;Target=comp143787_c0_seq1 625 59 .;CDS_Target=comp143787_c0_seq1 231 136 .;locus=RLOC_00023037
Chr2	stalkie_big_nohaplotig	exon	155807431	155807995	99	+	.	Parent=comp143787_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155807507	155807602	.	+	0	Parent=comp143787_c0_seq1.mrna1
Chr2	gffcl	locus	155808218	155808957	.	-	.	ID=RLOC_00023038;geneIDs=comp150183_c0_seq1.path1;transcripts=comp150183_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155808218	155808957	.	-	.	ID=comp150183_c0_seq1.mrna1;geneID=comp150183_c0_seq1.path1;Name=comp150183_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=739;mismatches=1;indels=0;unknowns=0;Target=comp150183_c0_seq1 740 1 .;CDS_Target=comp150183_c0_seq1 523 356 .;locus=RLOC_00023038
Chr2	stalkie_big_nohaplotig	exon	155808218	155808957	99	-	.	Parent=comp150183_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155808435	155808602	.	-	0	Parent=comp150183_c0_seq1.mrna1
Chr2	gffcl	locus	155810122	155810942	.	+	.	ID=RLOC_00023039;geneIDs=comp141729_c0_seq1.path1;transcripts=comp141729_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155810122	155810942	.	+	.	ID=comp141729_c0_seq1.mrna1;geneID=comp141729_c0_seq1.path1;Name=comp141729_c0_seq1;Dir=indeterminatecoverage=97.3;identity=94.7;matches=782;mismatches=21;indels=23;unknowns=0;Target=comp141729_c0_seq1 830 23 .;CDS_Target=comp141729_c0_seq1 541 479 .;locus=RLOC_00023039
Chr2	stalkie_big_nohaplotig	exon	155810122	155810942	94	+	.	Parent=comp141729_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155810596	155810653	.	+	0	Parent=comp141729_c0_seq1.mrna1
Chr2	gffcl	locus	155811179	155811443	.	-	.	ID=RLOC_00023040;geneIDs=comp152609_c0_seq1.path1;transcripts=comp152609_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155811179	155811443	.	-	.	ID=comp152609_c0_seq1.mrna1;geneID=comp152609_c0_seq1.path1;Name=comp152609_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=261;mismatches=4;indels=0;unknowns=0;Target=comp152609_c0_seq1 265 1 .;CDS_Target=comp152609_c0_seq1 118 2 .;locus=RLOC_00023040
Chr2	stalkie_big_nohaplotig	exon	155811179	155811443	98	-	.	Parent=comp152609_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155811326	155811442	.	-	0	Parent=comp152609_c0_seq1.mrna1
Chr2	gffcl	locus	155811949	155819440	.	-	.	ID=RLOC_00023041;geneIDs=FBgn0259222.1.path1;transcripts=FBgn0259222.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155811949	155819440	.	-	.	ID=FBgn0259222.1.mrna1;geneID=FBgn0259222.1.path1;Name=FBgn0259222.1;Dir=sensecoverage=100.0;identity=100.0;matches=1641;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023041
Chr2	stalkie_big_nohaplotig	exon	155811949	155811979	100	-	.	Parent=FBgn0259222.1.mrna1;Target=FBgn0259222.1 1611 1641 +
Chr2	stalkie_big_nohaplotig	exon	155816434	155816563	100	-	.	Parent=FBgn0259222.1.mrna1;Target=FBgn0259222.1 1481 1610 +
Chr2	stalkie_big_nohaplotig	exon	155817579	155817668	100	-	.	Parent=FBgn0259222.1.mrna1;Target=FBgn0259222.1 1391 1480 +
Chr2	stalkie_big_nohaplotig	exon	155817733	155817922	100	-	.	Parent=FBgn0259222.1.mrna1;Target=FBgn0259222.1 1201 1390 +
Chr2	stalkie_big_nohaplotig	exon	155817989	155818117	100	-	.	Parent=FBgn0259222.1.mrna1;Target=FBgn0259222.1 1072 1200 +
Chr2	stalkie_big_nohaplotig	exon	155818250	155818428	100	-	.	Parent=FBgn0259222.1.mrna1;Target=FBgn0259222.1 893 1071 +
Chr2	stalkie_big_nohaplotig	exon	155818497	155818935	100	-	.	Parent=FBgn0259222.1.mrna1;Target=FBgn0259222.1 454 892 +
Chr2	stalkie_big_nohaplotig	exon	155818988	155819440	100	-	.	Parent=FBgn0259222.1.mrna1;Target=FBgn0259222.1 1 453 +
Chr2	stalkie_big_nohaplotig	CDS	155811949	155811979	.	-	1	Parent=FBgn0259222.1.mrna1;Target=FBgn0259222.1 1611 1641 +
Chr2	stalkie_big_nohaplotig	CDS	155816434	155816563	.	-	2	Parent=FBgn0259222.1.mrna1;Target=FBgn0259222.1 1481 1610 +
Chr2	stalkie_big_nohaplotig	CDS	155817579	155817668	.	-	2	Parent=FBgn0259222.1.mrna1;Target=FBgn0259222.1 1391 1480 +
Chr2	stalkie_big_nohaplotig	CDS	155817733	155817922	.	-	0	Parent=FBgn0259222.1.mrna1;Target=FBgn0259222.1 1201 1390 +
Chr2	stalkie_big_nohaplotig	CDS	155817989	155818117	.	-	0	Parent=FBgn0259222.1.mrna1;Target=FBgn0259222.1 1072 1200 +
Chr2	stalkie_big_nohaplotig	CDS	155818250	155818428	.	-	2	Parent=FBgn0259222.1.mrna1;Target=FBgn0259222.1 893 1071 +
Chr2	stalkie_big_nohaplotig	CDS	155818497	155818935	.	-	0	Parent=FBgn0259222.1.mrna1;Target=FBgn0259222.1 454 892 +
Chr2	stalkie_big_nohaplotig	CDS	155818988	155819440	.	-	0	Parent=FBgn0259222.1.mrna1;Target=FBgn0259222.1 1 453 +
Chr2	gffcl	locus	155812812	155813143	.	+	.	ID=RLOC_00023042;geneIDs=comp144381_c0_seq1.path1;transcripts=comp144381_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155812812	155813143	.	+	.	ID=comp144381_c0_seq1.mrna1;geneID=comp144381_c0_seq1.path1;Name=comp144381_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=327;mismatches=5;indels=0;unknowns=0;Target=comp144381_c0_seq1 332 1 .;CDS_Target=comp144381_c0_seq1 77 3 .;locus=RLOC_00023042
Chr2	stalkie_big_nohaplotig	exon	155812812	155813143	98	+	.	Parent=comp144381_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155812814	155812888	.	+	0	Parent=comp144381_c0_seq1.mrna1
Chr2	gffcl	locus	155815924	155816155	.	-	.	ID=RLOC_00023043;geneIDs=comp144472_c0_seq1.path1;transcripts=comp144472_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155815924	155816155	.	-	.	ID=comp144472_c0_seq1.mrna1;geneID=comp144472_c0_seq1.path1;Name=comp144472_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=231;mismatches=1;indels=0;unknowns=0;Target=comp144472_c0_seq1 232 1 .;CDS_Target=comp144472_c0_seq1 125 3 .;locus=RLOC_00023043
Chr2	stalkie_big_nohaplotig	exon	155815924	155816155	99	-	.	Parent=comp144472_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155816031	155816153	.	-	0	Parent=comp144472_c0_seq1.mrna1
Chr2	gffcl	locus	155834316	155836161	.	-	.	ID=RLOC_00023044;geneIDs=FBgn0004107.1.path1;transcripts=FBgn0004107.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155834316	155836161	.	-	.	ID=FBgn0004107.1.mrna1;geneID=FBgn0004107.1.path1;Name=FBgn0004107.1;Dir=sensecoverage=100.0;identity=100.0;matches=915;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023044
Chr2	stalkie_big_nohaplotig	exon	155834316	155834429	100	-	.	Parent=FBgn0004107.1.mrna1;Target=FBgn0004107.1 802 915 +
Chr2	stalkie_big_nohaplotig	exon	155834553	155834750	100	-	.	Parent=FBgn0004107.1.mrna1;Target=FBgn0004107.1 604 801 +
Chr2	stalkie_big_nohaplotig	exon	155834806	155834967	100	-	.	Parent=FBgn0004107.1.mrna1;Target=FBgn0004107.1 442 603 +
Chr2	stalkie_big_nohaplotig	exon	155835030	155835140	100	-	.	Parent=FBgn0004107.1.mrna1;Target=FBgn0004107.1 331 441 +
Chr2	stalkie_big_nohaplotig	exon	155835197	155835392	100	-	.	Parent=FBgn0004107.1.mrna1;Target=FBgn0004107.1 135 330 +
Chr2	stalkie_big_nohaplotig	exon	155836028	155836161	100	-	.	Parent=FBgn0004107.1.mrna1;Target=FBgn0004107.1 1 134 +
Chr2	stalkie_big_nohaplotig	CDS	155834316	155834429	.	-	0	Parent=FBgn0004107.1.mrna1;Target=FBgn0004107.1 802 915 +
Chr2	stalkie_big_nohaplotig	CDS	155834553	155834750	.	-	0	Parent=FBgn0004107.1.mrna1;Target=FBgn0004107.1 604 801 +
Chr2	stalkie_big_nohaplotig	CDS	155834806	155834967	.	-	0	Parent=FBgn0004107.1.mrna1;Target=FBgn0004107.1 442 603 +
Chr2	stalkie_big_nohaplotig	CDS	155835030	155835140	.	-	0	Parent=FBgn0004107.1.mrna1;Target=FBgn0004107.1 331 441 +
Chr2	stalkie_big_nohaplotig	CDS	155835197	155835392	.	-	1	Parent=FBgn0004107.1.mrna1;Target=FBgn0004107.1 135 330 +
Chr2	stalkie_big_nohaplotig	CDS	155836028	155836161	.	-	0	Parent=FBgn0004107.1.mrna1;Target=FBgn0004107.1 1 134 +
Chr2	gffcl	locus	155850248	155854490	.	+	.	ID=RLOC_00023045;geneIDs=comp89027_c0_seq1.path1;transcripts=comp89027_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155850248	155854490	.	+	.	ID=comp89027_c0_seq1.mrna1;geneID=comp89027_c0_seq1.path1;Name=comp89027_c0_seq1;Dir=sensecoverage=100.0;identity=96.7;matches=698;mismatches=3;indels=21;unknowns=0;Target=comp89027_c0_seq1 65 220 +;locus=RLOC_00023045
Chr2	stalkie_big_nohaplotig	exon	155850248	155850703	94	+	.	Parent=comp89027_c0_seq1.mrna1;Target=comp89027_c0_seq1 1 463 +
Chr2	stalkie_big_nohaplotig	exon	155854239	155854490	100	+	.	Parent=comp89027_c0_seq1.mrna1;Target=comp89027_c0_seq1 464 715 +
Chr2	stalkie_big_nohaplotig	CDS	155850312	155850467	.	+	0	Parent=comp89027_c0_seq1.mrna1
Chr2	gffcl	locus	155893227	155895554	.	-	.	ID=RLOC_00023046;geneIDs=FBgn0261268.2.path1;transcripts=FBgn0261268.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155893227	155895554	.	-	.	ID=FBgn0261268.2.mrna1;geneID=FBgn0261268.2.path1;Name=FBgn0261268.2;Dir=indeterminatecoverage=100.0;identity=99.6;matches=2318;mismatches=10;indels=0;unknowns=0;Target=FBgn0261268.2 2328 1 .;locus=RLOC_00023046
Chr2	stalkie_big_nohaplotig	exon	155893227	155895554	99	-	.	Parent=FBgn0261268.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155893227	155895554	.	-	0	Parent=FBgn0261268.2.mrna1
Chr2	gffcl	locus	155914177	155915001	.	-	.	ID=RLOC_00023047;geneIDs=comp116564_c0_seq1.path1;transcripts=comp116564_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155914177	155915001	.	-	.	ID=comp116564_c0_seq1.mrna1;geneID=comp116564_c0_seq1.path1;Name=comp116564_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.4;matches=823;mismatches=2;indels=3;unknowns=0;Target=comp116564_c0_seq1 829 2 .;CDS_Target=comp116564_c0_seq1 76 2 .;locus=RLOC_00023047
Chr2	stalkie_big_nohaplotig	exon	155914177	155915001	99	-	.	Parent=comp116564_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155914927	155915001	.	-	0	Parent=comp116564_c0_seq1.mrna1
Chr2	gffcl	locus	155941142	155962125	.	+	.	ID=RLOC_00023048;geneIDs=FBgn0024944.1.path1,comp154500_c1_seq1.path1;transcripts=FBgn0024944.1.mrna1,comp154500_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155941142	155953640	.	+	.	ID=FBgn0024944.1.mrna1;geneID=FBgn0024944.1.path1;Name=FBgn0024944.1;Dir=sensecoverage=100.0;identity=99.8;matches=1302;mismatches=3;indels=0;unknowns=0;locus=RLOC_00023048
Chr2	stalkie_big_nohaplotig	exon	155941142	155941535	99	+	.	Parent=FBgn0024944.1.mrna1;Target=FBgn0024944.1 1 394 +
Chr2	stalkie_big_nohaplotig	exon	155952730	155953640	99	+	.	Parent=FBgn0024944.1.mrna1;Target=FBgn0024944.1 395 1305 +
Chr2	stalkie_big_nohaplotig	CDS	155941142	155941535	.	+	0	Parent=FBgn0024944.1.mrna1;Target=FBgn0024944.1 1 394 +
Chr2	stalkie_big_nohaplotig	CDS	155952730	155953640	.	+	2	Parent=FBgn0024944.1.mrna1;Target=FBgn0024944.1 395 1305 +
Chr2	stalkie_big_nohaplotig	mRNA	155941142	155962125	.	+	.	ID=comp154500_c1_seq1.mrna1;geneID=comp154500_c1_seq1.path1;Name=comp154500_c1_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=1634;mismatches=2;indels=1;unknowns=0;locus=RLOC_00023048
Chr2	stalkie_big_nohaplotig	exon	155941142	155941535	99	+	.	Parent=comp154500_c1_seq1.mrna1;Target=comp154500_c1_seq1 1 394 +
Chr2	stalkie_big_nohaplotig	exon	155960884	155962125	99	+	.	Parent=comp154500_c1_seq1.mrna1;Target=comp154500_c1_seq1 395 1637 +
Chr2	stalkie_big_nohaplotig	CDS	155941142	155941535	.	+	0	Parent=comp154500_c1_seq1.mrna1;Target=comp154500_c1_seq1 1 394 +
Chr2	stalkie_big_nohaplotig	CDS	155960884	155961809	.	+	2	Parent=comp154500_c1_seq1.mrna1;Target=comp154500_c1_seq1 395 1320 +
Chr2	gffcl	locus	155976852	155977795	.	-	.	ID=RLOC_00023049;geneIDs=comp148665_c0_seq1.path1;transcripts=comp148665_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155976852	155977795	.	-	.	ID=comp148665_c0_seq1.mrna1;geneID=comp148665_c0_seq1.path1;Name=comp148665_c0_seq1;Dir=antisensecoverage=98.3;identity=99.8;matches=806;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023049
Chr2	stalkie_big_nohaplotig	exon	155976852	155977192	99	-	.	Parent=comp148665_c0_seq1.mrna1;Target=comp148665_c0_seq1 15 355 -
Chr2	stalkie_big_nohaplotig	exon	155977265	155977514	99	-	.	Parent=comp148665_c0_seq1.mrna1;Target=comp148665_c0_seq1 356 605 -
Chr2	stalkie_big_nohaplotig	exon	155977579	155977795	100	-	.	Parent=comp148665_c0_seq1.mrna1;Target=comp148665_c0_seq1 606 822 -
Chr2	stalkie_big_nohaplotig	CDS	155977032	155977192	.	-	2	Parent=comp148665_c0_seq1.mrna1;Target=comp148665_c0_seq1 195 355 .
Chr2	stalkie_big_nohaplotig	CDS	155977265	155977514	.	-	0	Parent=comp148665_c0_seq1.mrna1;Target=comp148665_c0_seq1 356 605 .
Chr2	stalkie_big_nohaplotig	CDS	155977579	155977608	.	-	0	Parent=comp148665_c0_seq1.mrna1;Target=comp148665_c0_seq1 606 635 .
Chr2	gffcl	locus	155983514	155986471	.	+	.	ID=RLOC_00023050;geneIDs=ORF143.path1;transcripts=ORF143.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155983514	155986471	.	+	.	ID=ORF143.mrna1;geneID=ORF143.path1;Name=ORF143;Dir=sensecoverage=99.7;identity=100.0;matches=2771;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023050
Chr2	stalkie_big_nohaplotig	exon	155983514	155983549	100	+	.	Parent=ORF143.mrna1;Target=ORF143 1 36 +
Chr2	stalkie_big_nohaplotig	exon	155983603	155983864	100	+	.	Parent=ORF143.mrna1;Target=ORF143 37 298 +
Chr2	stalkie_big_nohaplotig	exon	155983938	155984069	100	+	.	Parent=ORF143.mrna1;Target=ORF143 299 430 +
Chr2	stalkie_big_nohaplotig	exon	155984131	155986471	100	+	.	Parent=ORF143.mrna1;Target=ORF143 431 2771 +
Chr2	stalkie_big_nohaplotig	CDS	155983514	155983549	.	+	0	Parent=ORF143.mrna1;Target=ORF143 1 36 +
Chr2	stalkie_big_nohaplotig	CDS	155983603	155983864	.	+	0	Parent=ORF143.mrna1;Target=ORF143 37 298 +
Chr2	stalkie_big_nohaplotig	CDS	155983938	155984069	.	+	2	Parent=ORF143.mrna1;Target=ORF143 299 430 +
Chr2	stalkie_big_nohaplotig	CDS	155984131	155986469	.	+	2	Parent=ORF143.mrna1;Target=ORF143 431 2769 +
Chr2	gffcl	locus	155990387	155990808	.	-	.	ID=RLOC_00023051;geneIDs=comp118519_c0_seq1.path1;transcripts=comp118519_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155990387	155990808	.	-	.	ID=comp118519_c0_seq1.mrna1;geneID=comp118519_c0_seq1.path1;Name=comp118519_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.3;matches=419;mismatches=3;indels=0;unknowns=0;Target=comp118519_c0_seq1 422 1 .;CDS_Target=comp118519_c0_seq1 312 214 .;locus=RLOC_00023051
Chr2	stalkie_big_nohaplotig	exon	155990387	155990808	99	-	.	Parent=comp118519_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	155990497	155990595	.	-	0	Parent=comp118519_c0_seq1.mrna1
Chr2	gffcl	locus	155991288	155993803	.	-	.	ID=RLOC_00023052;geneIDs=FBgn0038819.1.path1;transcripts=FBgn0038819.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	155991288	155993803	.	-	.	ID=FBgn0038819.1.mrna1;geneID=FBgn0038819.1.path1;Name=FBgn0038819.1;Dir=sensecoverage=100.0;identity=99.8;matches=1081;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023052
Chr2	stalkie_big_nohaplotig	exon	155991288	155992325	99	-	.	Parent=FBgn0038819.1.mrna1;Target=FBgn0038819.1 46 1083 +
Chr2	stalkie_big_nohaplotig	exon	155993759	155993803	100	-	.	Parent=FBgn0038819.1.mrna1;Target=FBgn0038819.1 1 45 +
Chr2	stalkie_big_nohaplotig	CDS	155991288	155992325	.	-	0	Parent=FBgn0038819.1.mrna1;Target=FBgn0038819.1 46 1083 +
Chr2	stalkie_big_nohaplotig	CDS	155993759	155993803	.	-	0	Parent=FBgn0038819.1.mrna1;Target=FBgn0038819.1 1 45 +
Chr2	gffcl	locus	156004451	156004524	.	+	.	ID=RLOC_00023053;geneIDs=comp140139_c0_seq1.path1;transcripts=comp140139_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156004451	156004524	.	+	.	ID=comp140139_c0_seq1.mrna1;geneID=comp140139_c0_seq1.path1;Name=comp140139_c0_seq1;Dir=indeterminatecoverage=11.5;identity=93.3;matches=70;mismatches=4;indels=1;unknowns=0;Target=comp140139_c0_seq1 75 1 .;locus=RLOC_00023053
Chr2	stalkie_big_nohaplotig	exon	156004451	156004524	93	+	.	Parent=comp140139_c0_seq1.mrna1
Chr2	gffcl	locus	156019515	156028435	.	.	.	ID=RLOC_00023054;geneIDs=FBgn0038818.1.path1,comp135323_c1_seq1.path1;transcripts=FBgn0038818.1.mrna1,comp135323_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156019515	156028435	.	+	.	ID=FBgn0038818.1.mrna1;geneID=FBgn0038818.1.path1;Name=FBgn0038818.1;Dir=sensecoverage=100.0;identity=100.0;matches=2982;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023054
Chr2	stalkie_big_nohaplotig	exon	156019515	156019554	100	+	.	Parent=FBgn0038818.1.mrna1;Target=FBgn0038818.1 1 40 +
Chr2	stalkie_big_nohaplotig	exon	156024840	156025268	100	+	.	Parent=FBgn0038818.1.mrna1;Target=FBgn0038818.1 41 469 +
Chr2	stalkie_big_nohaplotig	exon	156025869	156028058	100	+	.	Parent=FBgn0038818.1.mrna1;Target=FBgn0038818.1 470 2659 +
Chr2	stalkie_big_nohaplotig	exon	156028113	156028435	100	+	.	Parent=FBgn0038818.1.mrna1;Target=FBgn0038818.1 2660 2982 +
Chr2	stalkie_big_nohaplotig	CDS	156019515	156019554	.	+	0	Parent=FBgn0038818.1.mrna1;Target=FBgn0038818.1 1 40 +
Chr2	stalkie_big_nohaplotig	CDS	156024840	156025268	.	+	2	Parent=FBgn0038818.1.mrna1;Target=FBgn0038818.1 41 469 +
Chr2	stalkie_big_nohaplotig	CDS	156025869	156028058	.	+	2	Parent=FBgn0038818.1.mrna1;Target=FBgn0038818.1 470 2659 +
Chr2	stalkie_big_nohaplotig	CDS	156028113	156028435	.	+	2	Parent=FBgn0038818.1.mrna1;Target=FBgn0038818.1 2660 2982 +
Chr2	stalkie_big_nohaplotig	mRNA	156024341	156024863	.	-	.	ID=comp135323_c1_seq1.mrna1;geneID=comp135323_c1_seq1.path1;Name=comp135323_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=522;mismatches=0;indels=1;unknowns=0;Target=comp135323_c1_seq1 522 1 .;CDS_Target=comp135323_c1_seq1 143 3 .;locus=RLOC_00023054
Chr2	stalkie_big_nohaplotig	exon	156024341	156024863	99	-	.	Parent=comp135323_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156024721	156024861	.	-	0	Parent=comp135323_c1_seq1.mrna1
Chr2	gffcl	locus	156031824	156033240	.	+	.	ID=RLOC_00023055;geneIDs=FBgn0028422.path1;transcripts=FBgn0028422.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156031824	156033240	.	+	.	ID=FBgn0028422.mrna1;geneID=FBgn0028422.path1;Name=FBgn0028422;Dir=sensecoverage=100.0;identity=100.0;matches=972;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023055
Chr2	stalkie_big_nohaplotig	exon	156031824	156031942	100	+	.	Parent=FBgn0028422.mrna1;Target=FBgn0028422 1 119 +
Chr2	stalkie_big_nohaplotig	exon	156032007	156032208	100	+	.	Parent=FBgn0028422.mrna1;Target=FBgn0028422 120 321 +
Chr2	stalkie_big_nohaplotig	exon	156032279	156032504	100	+	.	Parent=FBgn0028422.mrna1;Target=FBgn0028422 322 547 +
Chr2	stalkie_big_nohaplotig	exon	156032676	156032788	100	+	.	Parent=FBgn0028422.mrna1;Target=FBgn0028422 548 660 +
Chr2	stalkie_big_nohaplotig	exon	156032849	156032998	100	+	.	Parent=FBgn0028422.mrna1;Target=FBgn0028422 661 810 +
Chr2	stalkie_big_nohaplotig	exon	156033079	156033240	100	+	.	Parent=FBgn0028422.mrna1;Target=FBgn0028422 811 972 +
Chr2	stalkie_big_nohaplotig	CDS	156031824	156031942	.	+	0	Parent=FBgn0028422.mrna1;Target=FBgn0028422 1 119 +
Chr2	stalkie_big_nohaplotig	CDS	156032007	156032208	.	+	1	Parent=FBgn0028422.mrna1;Target=FBgn0028422 120 321 +
Chr2	stalkie_big_nohaplotig	CDS	156032279	156032504	.	+	0	Parent=FBgn0028422.mrna1;Target=FBgn0028422 322 547 +
Chr2	stalkie_big_nohaplotig	CDS	156032676	156032788	.	+	2	Parent=FBgn0028422.mrna1;Target=FBgn0028422 548 660 +
Chr2	stalkie_big_nohaplotig	CDS	156032849	156032998	.	+	0	Parent=FBgn0028422.mrna1;Target=FBgn0028422 661 810 +
Chr2	stalkie_big_nohaplotig	CDS	156033079	156033240	.	+	0	Parent=FBgn0028422.mrna1;Target=FBgn0028422 811 972 +
Chr2	gffcl	locus	156033621	156037682	.	+	.	ID=RLOC_00023056;geneIDs=FBgn0051201.1.path1;transcripts=FBgn0051201.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156033621	156037682	.	+	.	ID=FBgn0051201.1.mrna1;geneID=FBgn0051201.1.path1;Name=FBgn0051201.1;Dir=sensecoverage=100.0;identity=100.0;matches=2736;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023056
Chr2	stalkie_big_nohaplotig	exon	156033621	156033759	100	+	.	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 1 139 +
Chr2	stalkie_big_nohaplotig	exon	156034165	156034334	100	+	.	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 140 309 +
Chr2	stalkie_big_nohaplotig	exon	156034401	156034617	100	+	.	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 310 526 +
Chr2	stalkie_big_nohaplotig	exon	156034674	156034864	100	+	.	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 527 717 +
Chr2	stalkie_big_nohaplotig	exon	156034931	156035129	100	+	.	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 718 916 +
Chr2	stalkie_big_nohaplotig	exon	156035180	156035343	100	+	.	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 917 1080 +
Chr2	stalkie_big_nohaplotig	exon	156035411	156035641	100	+	.	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 1081 1311 +
Chr2	stalkie_big_nohaplotig	exon	156035722	156035925	100	+	.	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 1312 1515 +
Chr2	stalkie_big_nohaplotig	exon	156035989	156036073	100	+	.	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 1516 1600 +
Chr2	stalkie_big_nohaplotig	exon	156036141	156036417	100	+	.	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 1601 1877 +
Chr2	stalkie_big_nohaplotig	exon	156036503	156036704	100	+	.	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 1878 2079 +
Chr2	stalkie_big_nohaplotig	exon	156036810	156037035	100	+	.	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 2080 2305 +
Chr2	stalkie_big_nohaplotig	exon	156037101	156037213	100	+	.	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 2306 2418 +
Chr2	stalkie_big_nohaplotig	exon	156037307	156037456	100	+	.	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 2419 2568 +
Chr2	stalkie_big_nohaplotig	exon	156037515	156037682	100	+	.	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 2569 2736 +
Chr2	stalkie_big_nohaplotig	CDS	156033621	156033759	.	+	0	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 1 139 +
Chr2	stalkie_big_nohaplotig	CDS	156034165	156034334	.	+	2	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 140 309 +
Chr2	stalkie_big_nohaplotig	CDS	156034401	156034617	.	+	0	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 310 526 +
Chr2	stalkie_big_nohaplotig	CDS	156034674	156034864	.	+	2	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 527 717 +
Chr2	stalkie_big_nohaplotig	CDS	156034931	156035129	.	+	0	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 718 916 +
Chr2	stalkie_big_nohaplotig	CDS	156035180	156035343	.	+	2	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 917 1080 +
Chr2	stalkie_big_nohaplotig	CDS	156035411	156035641	.	+	0	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 1081 1311 +
Chr2	stalkie_big_nohaplotig	CDS	156035722	156035925	.	+	0	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 1312 1515 +
Chr2	stalkie_big_nohaplotig	CDS	156035989	156036073	.	+	0	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 1516 1600 +
Chr2	stalkie_big_nohaplotig	CDS	156036141	156036417	.	+	2	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 1601 1877 +
Chr2	stalkie_big_nohaplotig	CDS	156036503	156036704	.	+	1	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 1878 2079 +
Chr2	stalkie_big_nohaplotig	CDS	156036810	156037035	.	+	0	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 2080 2305 +
Chr2	stalkie_big_nohaplotig	CDS	156037101	156037213	.	+	2	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 2306 2418 +
Chr2	stalkie_big_nohaplotig	CDS	156037307	156037456	.	+	0	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 2419 2568 +
Chr2	stalkie_big_nohaplotig	CDS	156037515	156037682	.	+	0	Parent=FBgn0051201.1.mrna1;Target=FBgn0051201.1 2569 2736 +
Chr2	gffcl	locus	156038227	156048204	.	-	.	ID=RLOC_00023057;geneIDs=FBgn0038816.1.path1;transcripts=FBgn0038816.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156038227	156048204	.	-	.	ID=FBgn0038816.1.mrna1;geneID=FBgn0038816.1.path1;Name=FBgn0038816.1;Dir=sensecoverage=100.0;identity=100.0;matches=7334;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023057
Chr2	stalkie_big_nohaplotig	exon	156038227	156038448	100	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 7114 7335 +
Chr2	stalkie_big_nohaplotig	exon	156038512	156038944	100	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 6681 7113 +
Chr2	stalkie_big_nohaplotig	exon	156039016	156039258	100	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 6438 6680 +
Chr2	stalkie_big_nohaplotig	exon	156039313	156039577	100	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 6173 6437 +
Chr2	stalkie_big_nohaplotig	exon	156039636	156039954	100	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 5854 6172 +
Chr2	stalkie_big_nohaplotig	exon	156040022	156040178	99	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 5697 5853 +
Chr2	stalkie_big_nohaplotig	exon	156040245	156040615	100	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 5326 5696 +
Chr2	stalkie_big_nohaplotig	exon	156041030	156042100	100	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 4255 5325 +
Chr2	stalkie_big_nohaplotig	exon	156042168	156042419	100	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 4003 4254 +
Chr2	stalkie_big_nohaplotig	exon	156042475	156042598	100	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 3879 4002 +
Chr2	stalkie_big_nohaplotig	exon	156042673	156043158	100	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 3393 3878 +
Chr2	stalkie_big_nohaplotig	exon	156043214	156043513	100	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 3093 3392 +
Chr2	stalkie_big_nohaplotig	exon	156043570	156044090	100	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 2572 3092 +
Chr2	stalkie_big_nohaplotig	exon	156044156	156044603	100	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 2124 2571 +
Chr2	stalkie_big_nohaplotig	exon	156044676	156044983	100	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 1816 2123 +
Chr2	stalkie_big_nohaplotig	exon	156045041	156045329	100	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 1527 1815 +
Chr2	stalkie_big_nohaplotig	exon	156045728	156045886	100	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 1368 1526 +
Chr2	stalkie_big_nohaplotig	exon	156045948	156046208	100	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 1107 1367 +
Chr2	stalkie_big_nohaplotig	exon	156046272	156046540	100	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 838 1106 +
Chr2	stalkie_big_nohaplotig	exon	156046620	156047006	100	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 451 837 +
Chr2	stalkie_big_nohaplotig	exon	156047068	156047233	100	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 285 450 +
Chr2	stalkie_big_nohaplotig	exon	156047850	156048009	100	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 125 284 +
Chr2	stalkie_big_nohaplotig	exon	156048081	156048204	100	-	.	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 1 124 +
Chr2	stalkie_big_nohaplotig	CDS	156038227	156038448	.	-	0	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 7114 7335 +
Chr2	stalkie_big_nohaplotig	CDS	156038512	156038944	.	-	1	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 6681 7113 +
Chr2	stalkie_big_nohaplotig	CDS	156039016	156039258	.	-	1	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 6438 6680 +
Chr2	stalkie_big_nohaplotig	CDS	156039313	156039577	.	-	2	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 6173 6437 +
Chr2	stalkie_big_nohaplotig	CDS	156039636	156039954	.	-	0	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 5854 6172 +
Chr2	stalkie_big_nohaplotig	CDS	156040022	156040178	.	-	1	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 5697 5853 +
Chr2	stalkie_big_nohaplotig	CDS	156040245	156040615	.	-	0	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 5326 5696 +
Chr2	stalkie_big_nohaplotig	CDS	156041030	156042100	.	-	0	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 4255 5325 +
Chr2	stalkie_big_nohaplotig	CDS	156042168	156042419	.	-	0	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 4003 4254 +
Chr2	stalkie_big_nohaplotig	CDS	156042475	156042598	.	-	1	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 3879 4002 +
Chr2	stalkie_big_nohaplotig	CDS	156042673	156043158	.	-	1	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 3393 3878 +
Chr2	stalkie_big_nohaplotig	CDS	156043214	156043513	.	-	1	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 3093 3392 +
Chr2	stalkie_big_nohaplotig	CDS	156043570	156044090	.	-	0	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 2572 3092 +
Chr2	stalkie_big_nohaplotig	CDS	156044156	156044603	.	-	1	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 2124 2571 +
Chr2	stalkie_big_nohaplotig	CDS	156044676	156044983	.	-	0	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 1816 2123 +
Chr2	stalkie_big_nohaplotig	CDS	156045041	156045329	.	-	1	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 1527 1815 +
Chr2	stalkie_big_nohaplotig	CDS	156045728	156045886	.	-	1	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 1368 1526 +
Chr2	stalkie_big_nohaplotig	CDS	156045948	156046208	.	-	1	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 1107 1367 +
Chr2	stalkie_big_nohaplotig	CDS	156046272	156046540	.	-	0	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 838 1106 +
Chr2	stalkie_big_nohaplotig	CDS	156046620	156047006	.	-	0	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 451 837 +
Chr2	stalkie_big_nohaplotig	CDS	156047068	156047233	.	-	1	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 285 450 +
Chr2	stalkie_big_nohaplotig	CDS	156047850	156048009	.	-	2	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 125 284 +
Chr2	stalkie_big_nohaplotig	CDS	156048081	156048204	.	-	0	Parent=FBgn0038816.1.mrna1;Target=FBgn0038816.1 1 124 +
Chr2	gffcl	locus	156051821	156057080	.	+	.	ID=RLOC_00023058;geneIDs=FBgn0015279.1.path1;transcripts=FBgn0015279.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156051821	156057080	.	+	.	ID=FBgn0015279.1.mrna1;geneID=FBgn0015279.1.path1;Name=FBgn0015279.1;Dir=sensecoverage=100.0;identity=100.0;matches=3342;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023058
Chr2	stalkie_big_nohaplotig	exon	156051821	156051854	100	+	.	Parent=FBgn0015279.1.mrna1;Target=FBgn0015279.1 1 34 +
Chr2	stalkie_big_nohaplotig	exon	156053161	156053399	100	+	.	Parent=FBgn0015279.1.mrna1;Target=FBgn0015279.1 35 273 +
Chr2	stalkie_big_nohaplotig	exon	156053475	156054128	100	+	.	Parent=FBgn0015279.1.mrna1;Target=FBgn0015279.1 274 927 +
Chr2	stalkie_big_nohaplotig	exon	156054195	156054889	100	+	.	Parent=FBgn0015279.1.mrna1;Target=FBgn0015279.1 928 1622 +
Chr2	stalkie_big_nohaplotig	exon	156054948	156055148	100	+	.	Parent=FBgn0015279.1.mrna1;Target=FBgn0015279.1 1623 1823 +
Chr2	stalkie_big_nohaplotig	exon	156055208	156056002	100	+	.	Parent=FBgn0015279.1.mrna1;Target=FBgn0015279.1 1824 2618 +
Chr2	stalkie_big_nohaplotig	exon	156056159	156056465	100	+	.	Parent=FBgn0015279.1.mrna1;Target=FBgn0015279.1 2619 2925 +
Chr2	stalkie_big_nohaplotig	exon	156056528	156056698	100	+	.	Parent=FBgn0015279.1.mrna1;Target=FBgn0015279.1 2926 3096 +
Chr2	stalkie_big_nohaplotig	exon	156056768	156056887	100	+	.	Parent=FBgn0015279.1.mrna1;Target=FBgn0015279.1 3097 3216 +
Chr2	stalkie_big_nohaplotig	exon	156056955	156057080	100	+	.	Parent=FBgn0015279.1.mrna1;Target=FBgn0015279.1 3217 3342 +
Chr2	stalkie_big_nohaplotig	CDS	156051821	156051854	.	+	0	Parent=FBgn0015279.1.mrna1;Target=FBgn0015279.1 1 34 +
Chr2	stalkie_big_nohaplotig	CDS	156053161	156053399	.	+	2	Parent=FBgn0015279.1.mrna1;Target=FBgn0015279.1 35 273 +
Chr2	stalkie_big_nohaplotig	CDS	156053475	156054128	.	+	0	Parent=FBgn0015279.1.mrna1;Target=FBgn0015279.1 274 927 +
Chr2	stalkie_big_nohaplotig	CDS	156054195	156054889	.	+	0	Parent=FBgn0015279.1.mrna1;Target=FBgn0015279.1 928 1622 +
Chr2	stalkie_big_nohaplotig	CDS	156054948	156055148	.	+	1	Parent=FBgn0015279.1.mrna1;Target=FBgn0015279.1 1623 1823 +
Chr2	stalkie_big_nohaplotig	CDS	156055208	156056002	.	+	1	Parent=FBgn0015279.1.mrna1;Target=FBgn0015279.1 1824 2618 +
Chr2	stalkie_big_nohaplotig	CDS	156056159	156056465	.	+	1	Parent=FBgn0015279.1.mrna1;Target=FBgn0015279.1 2619 2925 +
Chr2	stalkie_big_nohaplotig	CDS	156056528	156056698	.	+	0	Parent=FBgn0015279.1.mrna1;Target=FBgn0015279.1 2926 3096 +
Chr2	stalkie_big_nohaplotig	CDS	156056768	156056887	.	+	0	Parent=FBgn0015279.1.mrna1;Target=FBgn0015279.1 3097 3216 +
Chr2	stalkie_big_nohaplotig	CDS	156056955	156057080	.	+	0	Parent=FBgn0015279.1.mrna1;Target=FBgn0015279.1 3217 3342 +
Chr2	gffcl	locus	156052660	156052992	.	+	.	ID=RLOC_00023059;geneIDs=comp119632_c0_seq1.path2;transcripts=comp119632_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	156052660	156052992	.	+	.	ID=comp119632_c0_seq1.mrna2;geneID=comp119632_c0_seq1.path2;Name=comp119632_c0_seq1;Dir=indeterminatecoverage=62.6;identity=95.8;matches=319;mismatches=14;indels=0;unknowns=0;Target=comp119632_c0_seq1 532 200 .;locus=RLOC_00023059
Chr2	stalkie_big_nohaplotig	exon	156052660	156052992	95	+	.	Parent=comp119632_c0_seq1.mrna2
Chr2	gffcl	locus	156060436	156060896	.	-	.	ID=RLOC_00023060;geneIDs=comp417863_c0_seq1.path1;transcripts=comp417863_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156060436	156060896	.	-	.	ID=comp417863_c0_seq1.mrna1;geneID=comp417863_c0_seq1.path1;Name=comp417863_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=461;mismatches=0;indels=0;unknowns=0;Target=comp417863_c0_seq1 461 1 .;CDS_Target=comp417863_c0_seq1 74 3 .;locus=RLOC_00023060
Chr2	stalkie_big_nohaplotig	exon	156060436	156060896	100	-	.	Parent=comp417863_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156060823	156060894	.	-	0	Parent=comp417863_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156061220	158030554	.	+	.	ID=comp150433_c0_seq1.mrna1;geneID=comp150433_c0_seq1.path1;Name=comp150433_c0_seq1;Dir=indeterminatecoverage=73.1;identity=95.9;matches=991;mismatches=21;indels=21;unknowns=0;Target=comp150433_c0_seq1 685 488 .;locus=RLOC_00023061
Chr2	stalkie_big_nohaplotig	exon	156061220	156061963	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 744 1 .
Chr2	stalkie_big_nohaplotig	exon	157802066	157802069	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 748 745 .
Chr2	stalkie_big_nohaplotig	exon	157805182	157805184	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 751 749 .
Chr2	stalkie_big_nohaplotig	exon	157817203	157817209	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 758 752 .
Chr2	stalkie_big_nohaplotig	exon	157819936	157819939	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 762 759 .
Chr2	stalkie_big_nohaplotig	exon	157825416	157825418	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 765 763 .
Chr2	stalkie_big_nohaplotig	exon	157841176	157841183	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 773 766 .
Chr2	stalkie_big_nohaplotig	exon	157847401	157847406	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 779 774 .
Chr2	stalkie_big_nohaplotig	exon	157854672	157854684	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 792 780 .
Chr2	stalkie_big_nohaplotig	exon	157861334	157861336	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 795 793 .
Chr2	stalkie_big_nohaplotig	exon	157869091	157869092	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 797 796 .
Chr2	stalkie_big_nohaplotig	exon	157874958	157874961	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 801 798 .
Chr2	stalkie_big_nohaplotig	exon	157879001	157879003	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 804 802 .
Chr2	stalkie_big_nohaplotig	exon	157891066	157891073	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 812 805 .
Chr2	stalkie_big_nohaplotig	exon	157922452	157922463	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 829 818 .
Chr2	stalkie_big_nohaplotig	exon	157928654	157928660	57	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 836 830 .
Chr2	stalkie_big_nohaplotig	exon	157933379	157933381	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 839 837 .
Chr2	stalkie_big_nohaplotig	exon	157937991	157937996	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 845 840 .
Chr2	stalkie_big_nohaplotig	exon	157943399	157943404	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 851 846 .
Chr2	stalkie_big_nohaplotig	exon	157946444	157946447	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 855 852 .
Chr2	stalkie_big_nohaplotig	exon	157952558	157952562	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 860 856 .
Chr2	stalkie_big_nohaplotig	exon	157966463	157966466	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 864 861 .
Chr2	stalkie_big_nohaplotig	exon	157974207	157974214	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 872 865 .
Chr2	stalkie_big_nohaplotig	exon	157982130	157982134	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 877 873 .
Chr2	stalkie_big_nohaplotig	exon	157982812	157982821	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 887 878 .
Chr2	stalkie_big_nohaplotig	exon	157988145	157988150	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 893 888 .
Chr2	stalkie_big_nohaplotig	exon	157995672	157995685	78	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 907 894 .
Chr2	stalkie_big_nohaplotig	exon	157995820	157995831	91	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 919 908 .
Chr2	stalkie_big_nohaplotig	exon	157999308	157999317	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 929 920 .
Chr2	stalkie_big_nohaplotig	exon	158000515	158000522	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 944 937 .
Chr2	stalkie_big_nohaplotig	exon	158001579	158001588	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 954 945 .
Chr2	stalkie_big_nohaplotig	exon	158004809	158004823	50	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 980 957 .
Chr2	stalkie_big_nohaplotig	exon	158010623	158010660	56	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 1030 981 .
Chr2	stalkie_big_nohaplotig	exon	158015967	158015976	90	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 1040 1031 .
Chr2	stalkie_big_nohaplotig	exon	158028688	158028690	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 1043 1041 .
Chr2	stalkie_big_nohaplotig	exon	158030551	158030554	100	+	.	Parent=comp150433_c0_seq1.mrna1;Target=comp150433_c0_seq1 1047 1044 .
Chr2	stalkie_big_nohaplotig	CDS	156061707	156061904	.	+	0	Parent=comp150433_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156304680	156306617	.	+	.	ID=Dv_FBgn0201266.3.mrna2;geneID=Dv_FBgn0201266.3.path2;Name=Dv_FBgn0201266.3;Dir=sensecoverage=99.9;identity=99.3;matches=1345;mismatches=9;indels=0;unknowns=0;locus=RLOC_00023061
Chr2	stalkie_big_nohaplotig	exon	156304680	156304886	98	+	.	Parent=Dv_FBgn0201266.3.mrna2;Target=Dv_FBgn0201266.3 1 207 +
Chr2	stalkie_big_nohaplotig	exon	156304945	156305344	99	+	.	Parent=Dv_FBgn0201266.3.mrna2;Target=Dv_FBgn0201266.3 208 607 +
Chr2	stalkie_big_nohaplotig	exon	156305399	156305501	100	+	.	Parent=Dv_FBgn0201266.3.mrna2;Target=Dv_FBgn0201266.3 608 710 +
Chr2	stalkie_big_nohaplotig	exon	156305575	156306119	99	+	.	Parent=Dv_FBgn0201266.3.mrna2;Target=Dv_FBgn0201266.3 711 1255 +
Chr2	stalkie_big_nohaplotig	exon	156306519	156306617	100	+	.	Parent=Dv_FBgn0201266.3.mrna2;Target=Dv_FBgn0201266.3 1256 1354 +
Chr2	stalkie_big_nohaplotig	CDS	156304680	156304886	.	+	0	Parent=Dv_FBgn0201266.3.mrna2;Target=Dv_FBgn0201266.3 1 207 +
Chr2	stalkie_big_nohaplotig	CDS	156304945	156305344	.	+	0	Parent=Dv_FBgn0201266.3.mrna2;Target=Dv_FBgn0201266.3 208 607 +
Chr2	stalkie_big_nohaplotig	CDS	156305399	156305501	.	+	2	Parent=Dv_FBgn0201266.3.mrna2;Target=Dv_FBgn0201266.3 608 710 +
Chr2	stalkie_big_nohaplotig	CDS	156305575	156306119	.	+	1	Parent=Dv_FBgn0201266.3.mrna2;Target=Dv_FBgn0201266.3 711 1255 +
Chr2	stalkie_big_nohaplotig	CDS	156306519	156306616	.	+	2	Parent=Dv_FBgn0201266.3.mrna2;Target=Dv_FBgn0201266.3 1256 1353 +
Chr2	stalkie_big_nohaplotig	mRNA	156306098	156306542	.	-	.	ID=comp158499_c0_seq1.mrna2;geneID=comp158499_c0_seq1.path2;Name=comp158499_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=434;mismatches=11;indels=3;unknowns=0;Target=comp158499_c0_seq1 448 1 .;CDS_Target=comp158499_c0_seq1 53 3 .;locus=RLOC_00023061
Chr2	stalkie_big_nohaplotig	exon	156306098	156306542	96	-	.	Parent=comp158499_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	156306492	156306540	.	-	0	Parent=comp158499_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	157866208	158009182	.	-	.	ID=comp161150_c0_seq1.mrna1;geneID=comp161150_c0_seq1.path1;Name=comp161150_c0_seq1;Dir=indeterminatecoverage=81.6;identity=98.0;matches=1739;mismatches=30;indels=5;unknowns=0;Target=comp161150_c0_seq1 1805 1659 .;locus=RLOC_00023061
Chr2	stalkie_big_nohaplotig	exon	157866208	157867179	99	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 2269 1298 .
Chr2	stalkie_big_nohaplotig	exon	157867247	157867843	98	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 1297 696 .
Chr2	stalkie_big_nohaplotig	exon	157868478	157868488	81	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 695 685 .
Chr2	stalkie_big_nohaplotig	exon	157868828	157868845	83	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 684 667 .
Chr2	stalkie_big_nohaplotig	exon	157891709	157891716	87	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 666 659 .
Chr2	stalkie_big_nohaplotig	exon	157914491	157914496	100	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 658 653 .
Chr2	stalkie_big_nohaplotig	exon	157917970	157917981	91	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 652 641 .
Chr2	stalkie_big_nohaplotig	exon	157924181	157924188	100	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 640 633 .
Chr2	stalkie_big_nohaplotig	exon	157932075	157932090	68	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 632 617 .
Chr2	stalkie_big_nohaplotig	exon	157939874	157939886	100	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 616 604 .
Chr2	stalkie_big_nohaplotig	exon	157945296	157945305	90	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 603 594 .
Chr2	stalkie_big_nohaplotig	exon	157949514	157949524	81	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 593 583 .
Chr2	stalkie_big_nohaplotig	exon	157954470	157954478	100	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 582 574 .
Chr2	stalkie_big_nohaplotig	exon	157956776	157956780	100	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 573 569 .
Chr2	stalkie_big_nohaplotig	exon	157961249	157961262	100	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 568 555 .
Chr2	stalkie_big_nohaplotig	exon	157966352	157966361	100	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 541 532 .
Chr2	stalkie_big_nohaplotig	exon	157966696	157966704	100	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 531 523 .
Chr2	stalkie_big_nohaplotig	exon	157968439	157968443	100	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 522 518 .
Chr2	stalkie_big_nohaplotig	exon	157970403	157970409	100	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 517 511 .
Chr2	stalkie_big_nohaplotig	exon	157973689	157973690	100	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 510 509 .
Chr2	stalkie_big_nohaplotig	exon	157990752	157990762	100	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 481 471 .
Chr2	stalkie_big_nohaplotig	exon	157990802	157990809	100	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 430 423 .
Chr2	stalkie_big_nohaplotig	exon	158009177	158009182	100	-	.	Parent=comp161150_c0_seq1.mrna1;Target=comp161150_c0_seq1 422 417 .
Chr2	stalkie_big_nohaplotig	CDS	157866672	157866818	.	-	0	Parent=comp161150_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157868461	157869489	.	-	.	ID=comp98723_c0_seq1.mrna1;geneID=comp98723_c0_seq1.path1;Name=comp98723_c0_seq1;Dir=indeterminatecoverage=98.2;identity=99.4;matches=1023;mismatches=6;indels=0;unknowns=0;Target=comp98723_c0_seq1 1029 1 .;CDS_Target=comp98723_c0_seq1 497 396 .;locus=RLOC_00023061
Chr2	stalkie_big_nohaplotig	exon	157868461	157869489	99	-	.	Parent=comp98723_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157868993	157869094	.	-	0	Parent=comp98723_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157878891	157880045	.	+	.	ID=comp151155_c0_seq1.mrna1;geneID=comp151155_c0_seq1.path1;Name=comp151155_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1154;mismatches=1;indels=0;unknowns=0;Target=comp151155_c0_seq1 1155 1 .;CDS_Target=comp151155_c0_seq1 409 320 .;locus=RLOC_00023061
Chr2	stalkie_big_nohaplotig	exon	157878891	157880045	99	+	.	Parent=comp151155_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157879210	157879299	.	+	0	Parent=comp151155_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157951589	158017594	.	+	.	ID=comp116362_c2_seq1.mrna1;geneID=comp116362_c2_seq1.path1;Name=comp116362_c2_seq1;Dir=indeterminatecoverage=64.2;identity=94.9;matches=748;mismatches=25;indels=15;unknowns=0;Target=comp116362_c2_seq1 872 822 .;locus=RLOC_00023061
Chr2	stalkie_big_nohaplotig	exon	157951589	157951597	100	+	.	Parent=comp116362_c2_seq1.mrna1;Target=comp116362_c2_seq1 453 445 .
Chr2	stalkie_big_nohaplotig	exon	157952588	157952594	100	+	.	Parent=comp116362_c2_seq1.mrna1;Target=comp116362_c2_seq1 460 454 .
Chr2	stalkie_big_nohaplotig	exon	157953226	157953230	100	+	.	Parent=comp116362_c2_seq1.mrna1;Target=comp116362_c2_seq1 479 475 .
Chr2	stalkie_big_nohaplotig	exon	157957238	157957239	100	+	.	Parent=comp116362_c2_seq1.mrna1;Target=comp116362_c2_seq1 481 480 .
Chr2	stalkie_big_nohaplotig	exon	157964029	157964040	100	+	.	Parent=comp116362_c2_seq1.mrna1;Target=comp116362_c2_seq1 493 482 .
Chr2	stalkie_big_nohaplotig	exon	157964369	157964374	100	+	.	Parent=comp116362_c2_seq1.mrna1;Target=comp116362_c2_seq1 499 494 .
Chr2	stalkie_big_nohaplotig	exon	157968139	157968197	60	+	.	Parent=comp116362_c2_seq1.mrna1;Target=comp116362_c2_seq1 565 500 .
Chr2	stalkie_big_nohaplotig	exon	157972448	157972474	66	+	.	Parent=comp116362_c2_seq1.mrna1;Target=comp116362_c2_seq1 588 566 .
Chr2	stalkie_big_nohaplotig	exon	157974590	157974599	100	+	.	Parent=comp116362_c2_seq1.mrna1;Target=comp116362_c2_seq1 598 589 .
Chr2	stalkie_big_nohaplotig	exon	157980513	157980519	100	+	.	Parent=comp116362_c2_seq1.mrna1;Target=comp116362_c2_seq1 605 599 .
Chr2	stalkie_big_nohaplotig	exon	158016960	158017594	99	+	.	Parent=comp116362_c2_seq1.mrna1;Target=comp116362_c2_seq1 1240 606 .
Chr2	stalkie_big_nohaplotig	CDS	158017176	158017226	.	+	0	Parent=comp116362_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157957248	157960751	.	+	.	ID=FBgn0039215.1.mrna1;geneID=FBgn0039215.1.path1;Name=FBgn0039215.1;Dir=sensecoverage=100.0;identity=100.0;matches=2696;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023061
Chr2	stalkie_big_nohaplotig	exon	157957248	157957352	100	+	.	Parent=FBgn0039215.1.mrna1;Target=FBgn0039215.1 1 105 +
Chr2	stalkie_big_nohaplotig	exon	157957464	157957561	100	+	.	Parent=FBgn0039215.1.mrna1;Target=FBgn0039215.1 106 203 +
Chr2	stalkie_big_nohaplotig	exon	157957652	157959244	100	+	.	Parent=FBgn0039215.1.mrna1;Target=FBgn0039215.1 204 1796 +
Chr2	stalkie_big_nohaplotig	exon	157959444	157959558	100	+	.	Parent=FBgn0039215.1.mrna1;Target=FBgn0039215.1 1797 1911 +
Chr2	stalkie_big_nohaplotig	exon	157959848	157959920	100	+	.	Parent=FBgn0039215.1.mrna1;Target=FBgn0039215.1 1912 1984 +
Chr2	stalkie_big_nohaplotig	exon	157959978	157960083	100	+	.	Parent=FBgn0039215.1.mrna1;Target=FBgn0039215.1 1985 2090 +
Chr2	stalkie_big_nohaplotig	exon	157960145	157960751	99	+	.	Parent=FBgn0039215.1.mrna1;Target=FBgn0039215.1 2091 2697 +
Chr2	stalkie_big_nohaplotig	CDS	157957248	157957352	.	+	0	Parent=FBgn0039215.1.mrna1;Target=FBgn0039215.1 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	157957464	157957561	.	+	0	Parent=FBgn0039215.1.mrna1;Target=FBgn0039215.1 106 203 +
Chr2	stalkie_big_nohaplotig	CDS	157957652	157959244	.	+	1	Parent=FBgn0039215.1.mrna1;Target=FBgn0039215.1 204 1796 +
Chr2	stalkie_big_nohaplotig	CDS	157959444	157959558	.	+	1	Parent=FBgn0039215.1.mrna1;Target=FBgn0039215.1 1797 1911 +
Chr2	stalkie_big_nohaplotig	CDS	157959848	157959920	.	+	0	Parent=FBgn0039215.1.mrna1;Target=FBgn0039215.1 1912 1984 +
Chr2	stalkie_big_nohaplotig	CDS	157959978	157960083	.	+	2	Parent=FBgn0039215.1.mrna1;Target=FBgn0039215.1 1985 2090 +
Chr2	stalkie_big_nohaplotig	CDS	157960145	157960751	.	+	1	Parent=FBgn0039215.1.mrna1;Target=FBgn0039215.1 2091 2697 +
Chr2	stalkie_big_nohaplotig	mRNA	158008651	158009531	.	-	.	ID=comp135281_c0_seq1.mrna1;geneID=comp135281_c0_seq1.path1;Name=comp135281_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=877;mismatches=4;indels=0;unknowns=0;Target=comp135281_c0_seq1 881 1 .;CDS_Target=comp135281_c0_seq1 650 537 .;locus=RLOC_00023061
Chr2	stalkie_big_nohaplotig	exon	158008651	158009531	99	-	.	Parent=comp135281_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158008882	158008995	.	-	0	Parent=comp135281_c0_seq1.mrna1
Chr2	gffcl	locus	156069771	156071419	.	-	.	ID=RLOC_00023063;geneIDs=FBgn0038683.1.path1;transcripts=FBgn0038683.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156069771	156071419	.	-	.	ID=FBgn0038683.1.mrna1;geneID=FBgn0038683.1.path1;Name=FBgn0038683.1;Dir=sensecoverage=100.0;identity=100.0;matches=1398;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023063
Chr2	stalkie_big_nohaplotig	exon	156069771	156070432	100	-	.	Parent=FBgn0038683.1.mrna1;Target=FBgn0038683.1 737 1398 +
Chr2	stalkie_big_nohaplotig	exon	156070491	156071034	100	-	.	Parent=FBgn0038683.1.mrna1;Target=FBgn0038683.1 193 736 +
Chr2	stalkie_big_nohaplotig	exon	156071101	156071178	100	-	.	Parent=FBgn0038683.1.mrna1;Target=FBgn0038683.1 115 192 +
Chr2	stalkie_big_nohaplotig	exon	156071306	156071419	100	-	.	Parent=FBgn0038683.1.mrna1;Target=FBgn0038683.1 1 114 +
Chr2	stalkie_big_nohaplotig	CDS	156069771	156070432	.	-	2	Parent=FBgn0038683.1.mrna1;Target=FBgn0038683.1 737 1398 +
Chr2	stalkie_big_nohaplotig	CDS	156070491	156071034	.	-	0	Parent=FBgn0038683.1.mrna1;Target=FBgn0038683.1 193 736 +
Chr2	stalkie_big_nohaplotig	CDS	156071101	156071178	.	-	0	Parent=FBgn0038683.1.mrna1;Target=FBgn0038683.1 115 192 +
Chr2	stalkie_big_nohaplotig	CDS	156071306	156071419	.	-	0	Parent=FBgn0038683.1.mrna1;Target=FBgn0038683.1 1 114 +
Chr2	gffcl	locus	156092221	156093087	.	-	.	ID=RLOC_00023064;geneIDs=FBgn0030507.1.path1;transcripts=FBgn0030507.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156092221	156093087	.	-	.	ID=FBgn0030507.1.mrna1;geneID=FBgn0030507.1.path1;Name=FBgn0030507.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=867;mismatches=0;indels=0;unknowns=0;Target=FBgn0030507.1 867 1 .;locus=RLOC_00023064
Chr2	stalkie_big_nohaplotig	exon	156092221	156093087	100	-	.	Parent=FBgn0030507.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156092221	156093087	.	-	0	Parent=FBgn0030507.1.mrna1
Chr2	gffcl	locus	156097026	156098638	.	+	.	ID=RLOC_00023065;geneIDs=FBgn0002962.1.path1;transcripts=FBgn0002962.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156097026	156098638	.	+	.	ID=FBgn0002962.1.mrna1;geneID=FBgn0002962.1.path1;Name=FBgn0002962.1;Dir=sensecoverage=100.0;identity=100.0;matches=1245;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023065
Chr2	stalkie_big_nohaplotig	exon	156097026	156097109	100	+	.	Parent=FBgn0002962.1.mrna1;Target=FBgn0002962.1 1 84 +
Chr2	stalkie_big_nohaplotig	exon	156097191	156097674	100	+	.	Parent=FBgn0002962.1.mrna1;Target=FBgn0002962.1 85 568 +
Chr2	stalkie_big_nohaplotig	exon	156097848	156098260	100	+	.	Parent=FBgn0002962.1.mrna1;Target=FBgn0002962.1 569 981 +
Chr2	stalkie_big_nohaplotig	exon	156098375	156098638	100	+	.	Parent=FBgn0002962.1.mrna1;Target=FBgn0002962.1 982 1245 +
Chr2	stalkie_big_nohaplotig	CDS	156097026	156097109	.	+	0	Parent=FBgn0002962.1.mrna1;Target=FBgn0002962.1 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	156097191	156097674	.	+	0	Parent=FBgn0002962.1.mrna1;Target=FBgn0002962.1 85 568 +
Chr2	stalkie_big_nohaplotig	CDS	156097848	156098260	.	+	2	Parent=FBgn0002962.1.mrna1;Target=FBgn0002962.1 569 981 +
Chr2	stalkie_big_nohaplotig	CDS	156098375	156098638	.	+	0	Parent=FBgn0002962.1.mrna1;Target=FBgn0002962.1 982 1245 +
Chr2	gffcl	locus	156101116	156103279	.	-	.	ID=RLOC_00023066;geneIDs=FBgn0259704.1.path1;transcripts=FBgn0259704.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156101116	156103279	.	-	.	ID=FBgn0259704.1.mrna1;geneID=FBgn0259704.1.path1;Name=FBgn0259704.1;Dir=sensecoverage=100.0;identity=100.0;matches=1386;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023066
Chr2	stalkie_big_nohaplotig	exon	156101116	156101310	100	-	.	Parent=FBgn0259704.1.mrna1;Target=FBgn0259704.1 1192 1386 +
Chr2	stalkie_big_nohaplotig	exon	156101380	156101603	100	-	.	Parent=FBgn0259704.1.mrna1;Target=FBgn0259704.1 968 1191 +
Chr2	stalkie_big_nohaplotig	exon	156101671	156101899	100	-	.	Parent=FBgn0259704.1.mrna1;Target=FBgn0259704.1 739 967 +
Chr2	stalkie_big_nohaplotig	exon	156101975	156102243	100	-	.	Parent=FBgn0259704.1.mrna1;Target=FBgn0259704.1 470 738 +
Chr2	stalkie_big_nohaplotig	exon	156102741	156102999	100	-	.	Parent=FBgn0259704.1.mrna1;Target=FBgn0259704.1 211 469 +
Chr2	stalkie_big_nohaplotig	exon	156103070	156103279	100	-	.	Parent=FBgn0259704.1.mrna1;Target=FBgn0259704.1 1 210 +
Chr2	stalkie_big_nohaplotig	CDS	156101116	156101310	.	-	0	Parent=FBgn0259704.1.mrna1;Target=FBgn0259704.1 1192 1386 +
Chr2	stalkie_big_nohaplotig	CDS	156101380	156101603	.	-	2	Parent=FBgn0259704.1.mrna1;Target=FBgn0259704.1 968 1191 +
Chr2	stalkie_big_nohaplotig	CDS	156101671	156101899	.	-	0	Parent=FBgn0259704.1.mrna1;Target=FBgn0259704.1 739 967 +
Chr2	stalkie_big_nohaplotig	CDS	156101975	156102243	.	-	2	Parent=FBgn0259704.1.mrna1;Target=FBgn0259704.1 470 738 +
Chr2	stalkie_big_nohaplotig	CDS	156102741	156102999	.	-	0	Parent=FBgn0259704.1.mrna1;Target=FBgn0259704.1 211 469 +
Chr2	stalkie_big_nohaplotig	CDS	156103070	156103279	.	-	0	Parent=FBgn0259704.1.mrna1;Target=FBgn0259704.1 1 210 +
Chr2	gffcl	locus	156144817	156148329	.	+	.	ID=RLOC_00023068;geneIDs=FBgn0037819.1.path1;transcripts=FBgn0037819.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156144817	156148329	.	+	.	ID=FBgn0037819.1.mrna1;geneID=FBgn0037819.1.path1;Name=FBgn0037819.1;Dir=sensecoverage=100.0;identity=99.7;matches=870;mismatches=3;indels=0;unknowns=0;locus=RLOC_00023068
Chr2	stalkie_big_nohaplotig	exon	156144817	156144849	100	+	.	Parent=FBgn0037819.1.mrna1;Target=FBgn0037819.1 1 33 +
Chr2	stalkie_big_nohaplotig	exon	156147432	156148089	99	+	.	Parent=FBgn0037819.1.mrna1;Target=FBgn0037819.1 34 691 +
Chr2	stalkie_big_nohaplotig	exon	156148148	156148329	99	+	.	Parent=FBgn0037819.1.mrna1;Target=FBgn0037819.1 692 873 +
Chr2	stalkie_big_nohaplotig	CDS	156144817	156144849	.	+	0	Parent=FBgn0037819.1.mrna1;Target=FBgn0037819.1 1 33 +
Chr2	stalkie_big_nohaplotig	CDS	156147432	156148089	.	+	0	Parent=FBgn0037819.1.mrna1;Target=FBgn0037819.1 34 691 +
Chr2	stalkie_big_nohaplotig	CDS	156148148	156148329	.	+	2	Parent=FBgn0037819.1.mrna1;Target=FBgn0037819.1 692 873 +
Chr2	gffcl	locus	156145260	156145629	.	+	.	ID=RLOC_00023069;geneIDs=comp136125_c0_seq1.path1;transcripts=comp136125_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156145260	156145629	.	+	.	ID=comp136125_c0_seq1.mrna1;geneID=comp136125_c0_seq1.path1;Name=comp136125_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=370;mismatches=0;indels=0;unknowns=0;Target=comp136125_c0_seq1 370 1 .;CDS_Target=comp136125_c0_seq1 368 255 .;locus=RLOC_00023069
Chr2	stalkie_big_nohaplotig	exon	156145260	156145629	100	+	.	Parent=comp136125_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156145514	156145627	.	+	0	Parent=comp136125_c0_seq1.mrna1
Chr2	gffcl	locus	156148638	156150200	.	-	.	ID=RLOC_00023070;geneIDs=FBgn0037688.1.path1;transcripts=FBgn0037688.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156148638	156150200	.	-	.	ID=FBgn0037688.1.mrna1;geneID=FBgn0037688.1.path1;Name=FBgn0037688.1;Dir=sensecoverage=100.0;identity=99.9;matches=1379;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023070
Chr2	stalkie_big_nohaplotig	exon	156148638	156148784	100	-	.	Parent=FBgn0037688.1.mrna1;Target=FBgn0037688.1 1234 1380 +
Chr2	stalkie_big_nohaplotig	exon	156148847	156149230	100	-	.	Parent=FBgn0037688.1.mrna1;Target=FBgn0037688.1 850 1233 +
Chr2	stalkie_big_nohaplotig	exon	156149294	156150075	99	-	.	Parent=FBgn0037688.1.mrna1;Target=FBgn0037688.1 68 849 +
Chr2	stalkie_big_nohaplotig	exon	156150134	156150200	100	-	.	Parent=FBgn0037688.1.mrna1;Target=FBgn0037688.1 1 67 +
Chr2	stalkie_big_nohaplotig	CDS	156148638	156148784	.	-	0	Parent=FBgn0037688.1.mrna1;Target=FBgn0037688.1 1234 1380 +
Chr2	stalkie_big_nohaplotig	CDS	156148847	156149230	.	-	0	Parent=FBgn0037688.1.mrna1;Target=FBgn0037688.1 850 1233 +
Chr2	stalkie_big_nohaplotig	CDS	156149294	156150075	.	-	2	Parent=FBgn0037688.1.mrna1;Target=FBgn0037688.1 68 849 +
Chr2	stalkie_big_nohaplotig	CDS	156150134	156150200	.	-	0	Parent=FBgn0037688.1.mrna1;Target=FBgn0037688.1 1 67 +
Chr2	gffcl	locus	156153239	156155549	.	+	.	ID=RLOC_00023071;geneIDs=FBgn0037689.1.path1;transcripts=FBgn0037689.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156153239	156155549	.	+	.	ID=FBgn0037689.1.mrna1;geneID=FBgn0037689.1.path1;Name=FBgn0037689.1;Dir=sensecoverage=100.0;identity=99.5;matches=2108;mismatches=10;indels=0;unknowns=0;locus=RLOC_00023071
Chr2	stalkie_big_nohaplotig	exon	156153239	156153415	99	+	.	Parent=FBgn0037689.1.mrna1;Target=FBgn0037689.1 1 177 +
Chr2	stalkie_big_nohaplotig	exon	156153484	156153910	99	+	.	Parent=FBgn0037689.1.mrna1;Target=FBgn0037689.1 178 604 +
Chr2	stalkie_big_nohaplotig	exon	156153973	156154871	99	+	.	Parent=FBgn0037689.1.mrna1;Target=FBgn0037689.1 605 1503 +
Chr2	stalkie_big_nohaplotig	exon	156154935	156155549	99	+	.	Parent=FBgn0037689.1.mrna1;Target=FBgn0037689.1 1504 2118 +
Chr2	stalkie_big_nohaplotig	CDS	156153239	156153415	.	+	0	Parent=FBgn0037689.1.mrna1;Target=FBgn0037689.1 1 177 +
Chr2	stalkie_big_nohaplotig	CDS	156153484	156153910	.	+	0	Parent=FBgn0037689.1.mrna1;Target=FBgn0037689.1 178 604 +
Chr2	stalkie_big_nohaplotig	CDS	156153973	156154871	.	+	2	Parent=FBgn0037689.1.mrna1;Target=FBgn0037689.1 605 1503 +
Chr2	stalkie_big_nohaplotig	CDS	156154935	156155549	.	+	0	Parent=FBgn0037689.1.mrna1;Target=FBgn0037689.1 1504 2118 +
Chr2	gffcl	locus	156156337	156157888	.	+	.	ID=RLOC_00023072;geneIDs=FBgn0039733.1.path1;transcripts=FBgn0039733.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156156337	156157888	.	+	.	ID=FBgn0039733.1.mrna1;geneID=FBgn0039733.1.path1;Name=FBgn0039733.1;Dir=sensecoverage=100.0;identity=99.9;matches=1340;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023072
Chr2	stalkie_big_nohaplotig	exon	156156337	156156426	100	+	.	Parent=FBgn0039733.1.mrna1;Target=FBgn0039733.1 1 90 +
Chr2	stalkie_big_nohaplotig	exon	156156486	156156603	99	+	.	Parent=FBgn0039733.1.mrna1;Target=FBgn0039733.1 91 208 +
Chr2	stalkie_big_nohaplotig	exon	156156756	156157888	100	+	.	Parent=FBgn0039733.1.mrna1;Target=FBgn0039733.1 209 1341 +
Chr2	stalkie_big_nohaplotig	CDS	156156337	156156426	.	+	0	Parent=FBgn0039733.1.mrna1;Target=FBgn0039733.1 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	156156486	156156603	.	+	0	Parent=FBgn0039733.1.mrna1;Target=FBgn0039733.1 91 208 +
Chr2	stalkie_big_nohaplotig	CDS	156156756	156157888	.	+	2	Parent=FBgn0039733.1.mrna1;Target=FBgn0039733.1 209 1341 +
Chr2	gffcl	locus	156158959	156162784	.	+	.	ID=RLOC_00023073;geneIDs=FBgn0039137.1.path1;transcripts=FBgn0039137.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156158959	156162784	.	+	.	ID=FBgn0039137.1.mrna1;geneID=FBgn0039137.1.path1;Name=FBgn0039137.1;Dir=sensecoverage=100.0;identity=99.8;matches=2041;mismatches=5;indels=0;unknowns=0;locus=RLOC_00023073
Chr2	stalkie_big_nohaplotig	exon	156158959	156158990	100	+	.	Parent=FBgn0039137.1.mrna1;Target=FBgn0039137.1 1 32 +
Chr2	stalkie_big_nohaplotig	exon	156159062	156159302	100	+	.	Parent=FBgn0039137.1.mrna1;Target=FBgn0039137.1 33 273 +
Chr2	stalkie_big_nohaplotig	exon	156159362	156159557	100	+	.	Parent=FBgn0039137.1.mrna1;Target=FBgn0039137.1 274 469 +
Chr2	stalkie_big_nohaplotig	exon	156160343	156160512	99	+	.	Parent=FBgn0039137.1.mrna1;Target=FBgn0039137.1 470 639 +
Chr2	stalkie_big_nohaplotig	exon	156160594	156160921	100	+	.	Parent=FBgn0039137.1.mrna1;Target=FBgn0039137.1 640 967 +
Chr2	stalkie_big_nohaplotig	exon	156160979	156161408	99	+	.	Parent=FBgn0039137.1.mrna1;Target=FBgn0039137.1 968 1397 +
Chr2	stalkie_big_nohaplotig	exon	156161546	156161712	99	+	.	Parent=FBgn0039137.1.mrna1;Target=FBgn0039137.1 1398 1564 +
Chr2	stalkie_big_nohaplotig	exon	156162236	156162481	99	+	.	Parent=FBgn0039137.1.mrna1;Target=FBgn0039137.1 1565 1810 +
Chr2	stalkie_big_nohaplotig	exon	156162549	156162784	100	+	.	Parent=FBgn0039137.1.mrna1;Target=FBgn0039137.1 1811 2046 +
Chr2	stalkie_big_nohaplotig	CDS	156158959	156158990	.	+	0	Parent=FBgn0039137.1.mrna1;Target=FBgn0039137.1 1 32 +
Chr2	stalkie_big_nohaplotig	CDS	156159062	156159302	.	+	1	Parent=FBgn0039137.1.mrna1;Target=FBgn0039137.1 33 273 +
Chr2	stalkie_big_nohaplotig	CDS	156159362	156159557	.	+	0	Parent=FBgn0039137.1.mrna1;Target=FBgn0039137.1 274 469 +
Chr2	stalkie_big_nohaplotig	CDS	156160343	156160512	.	+	2	Parent=FBgn0039137.1.mrna1;Target=FBgn0039137.1 470 639 +
Chr2	stalkie_big_nohaplotig	CDS	156160594	156160921	.	+	0	Parent=FBgn0039137.1.mrna1;Target=FBgn0039137.1 640 967 +
Chr2	stalkie_big_nohaplotig	CDS	156160979	156161408	.	+	2	Parent=FBgn0039137.1.mrna1;Target=FBgn0039137.1 968 1397 +
Chr2	stalkie_big_nohaplotig	CDS	156161546	156161712	.	+	1	Parent=FBgn0039137.1.mrna1;Target=FBgn0039137.1 1398 1564 +
Chr2	stalkie_big_nohaplotig	CDS	156162236	156162481	.	+	2	Parent=FBgn0039137.1.mrna1;Target=FBgn0039137.1 1565 1810 +
Chr2	stalkie_big_nohaplotig	CDS	156162549	156162784	.	+	2	Parent=FBgn0039137.1.mrna1;Target=FBgn0039137.1 1811 2046 +
Chr2	gffcl	locus	156160343	156164883	.	-	.	ID=RLOC_00023074;geneIDs=FBgn0039135.1.path1,comp158567_c0_seq1.path1;transcripts=comp158567_c0_seq1.mrna1,FBgn0039135.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156160343	156164610	.	-	.	ID=comp158567_c0_seq1.mrna1;geneID=comp158567_c0_seq1.path1;Name=comp158567_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=3246;mismatches=13;indels=9;unknowns=0;locus=RLOC_00023074
Chr2	stalkie_big_nohaplotig	exon	156160343	156160512	99	-	.	Parent=comp158567_c0_seq1.mrna1;Target=comp158567_c0_seq1 3259 3090 .
Chr2	stalkie_big_nohaplotig	exon	156160594	156160921	100	-	.	Parent=comp158567_c0_seq1.mrna1;Target=comp158567_c0_seq1 3089 2762 .
Chr2	stalkie_big_nohaplotig	exon	156160979	156161408	99	-	.	Parent=comp158567_c0_seq1.mrna1;Target=comp158567_c0_seq1 2761 2332 .
Chr2	stalkie_big_nohaplotig	exon	156161546	156161712	99	-	.	Parent=comp158567_c0_seq1.mrna1;Target=comp158567_c0_seq1 2331 2165 .
Chr2	stalkie_big_nohaplotig	exon	156162236	156162481	99	-	.	Parent=comp158567_c0_seq1.mrna1;Target=comp158567_c0_seq1 2164 1919 .
Chr2	stalkie_big_nohaplotig	exon	156162549	156164187	99	-	.	Parent=comp158567_c0_seq1.mrna1;Target=comp158567_c0_seq1 1918 289 .
Chr2	stalkie_big_nohaplotig	exon	156164247	156164490	99	-	.	Parent=comp158567_c0_seq1.mrna1;Target=comp158567_c0_seq1 288 45 .
Chr2	stalkie_big_nohaplotig	exon	156164567	156164610	100	-	.	Parent=comp158567_c0_seq1.mrna1;Target=comp158567_c0_seq1 44 1 .
Chr2	stalkie_big_nohaplotig	CDS	156163984	156164187	.	-	0	Parent=comp158567_c0_seq1.mrna1;Target=comp158567_c0_seq1 492 289 .
Chr2	stalkie_big_nohaplotig	CDS	156164247	156164490	.	-	1	Parent=comp158567_c0_seq1.mrna1;Target=comp158567_c0_seq1 288 45 .
Chr2	stalkie_big_nohaplotig	CDS	156164567	156164610	.	-	0	Parent=comp158567_c0_seq1.mrna1;Target=comp158567_c0_seq1 44 1 .
Chr2	stalkie_big_nohaplotig	mRNA	156163987	156164883	.	-	.	ID=FBgn0039135.1.mrna1;geneID=FBgn0039135.1.path1;Name=FBgn0039135.1;Dir=sensecoverage=100.0;identity=99.9;matches=698;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023074
Chr2	stalkie_big_nohaplotig	exon	156163987	156164187	100	-	.	Parent=FBgn0039135.1.mrna1;Target=FBgn0039135.1 499 699 +
Chr2	stalkie_big_nohaplotig	exon	156164247	156164490	99	-	.	Parent=FBgn0039135.1.mrna1;Target=FBgn0039135.1 255 498 +
Chr2	stalkie_big_nohaplotig	exon	156164567	156164710	100	-	.	Parent=FBgn0039135.1.mrna1;Target=FBgn0039135.1 111 254 +
Chr2	stalkie_big_nohaplotig	exon	156164774	156164883	100	-	.	Parent=FBgn0039135.1.mrna1;Target=FBgn0039135.1 1 110 +
Chr2	stalkie_big_nohaplotig	CDS	156163987	156164187	.	-	0	Parent=FBgn0039135.1.mrna1;Target=FBgn0039135.1 499 699 +
Chr2	stalkie_big_nohaplotig	CDS	156164247	156164490	.	-	1	Parent=FBgn0039135.1.mrna1;Target=FBgn0039135.1 255 498 +
Chr2	stalkie_big_nohaplotig	CDS	156164567	156164710	.	-	1	Parent=FBgn0039135.1.mrna1;Target=FBgn0039135.1 111 254 +
Chr2	stalkie_big_nohaplotig	CDS	156164774	156164883	.	-	0	Parent=FBgn0039135.1.mrna1;Target=FBgn0039135.1 1 110 +
Chr2	gffcl	locus	156167192	156170261	.	-	.	ID=RLOC_00023075;geneIDs=comp120162_c0_seq1.path1,comp151009_c0_seq1.path1;transcripts=comp151009_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156168226	156170261	.	-	.	ID=comp151009_c0_seq1.mrna1;geneID=comp151009_c0_seq1.path1;Name=comp151009_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.5;matches=2029;mismatches=7;indels=3;unknowns=0;Target=comp151009_c0_seq1 2045 7 .;CDS_Target=comp151009_c0_seq1 1269 1144 .;locus=RLOC_00023075
Chr2	stalkie_big_nohaplotig	exon	156168226	156170261	99	-	.	Parent=comp151009_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156169002	156169127	.	-	0	Parent=comp151009_c0_seq1.mrna1
Chr2	gffcl	locus	156170624	156213963	.	-	.	ID=RLOC_00023076;geneIDs=FBgn0051140.1.path1,comp156894_c1_seq1.path1;transcripts=FBgn0051140.1.mrna1,comp156894_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156170624	156188104	.	-	.	ID=FBgn0051140.1.mrna1;geneID=FBgn0051140.1.path1;Name=FBgn0051140.1;Dir=sensecoverage=94.7;identity=99.9;matches=2889;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023076
Chr2	stalkie_big_nohaplotig	exon	156170624	156170776	100	-	.	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 2902 3054 +
Chr2	stalkie_big_nohaplotig	exon	156176027	156176134	100	-	.	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 2794 2901 +
Chr2	stalkie_big_nohaplotig	exon	156176280	156176436	100	-	.	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 2637 2793 +
Chr2	stalkie_big_nohaplotig	exon	156176493	156176781	100	-	.	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 2348 2636 +
Chr2	stalkie_big_nohaplotig	exon	156179244	156179498	100	-	.	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 2093 2347 +
Chr2	stalkie_big_nohaplotig	exon	156179569	156179717	100	-	.	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 1944 2092 +
Chr2	stalkie_big_nohaplotig	exon	156180501	156180730	100	-	.	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 1714 1943 +
Chr2	stalkie_big_nohaplotig	exon	156180814	156181135	100	-	.	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 1392 1713 +
Chr2	stalkie_big_nohaplotig	exon	156181212	156181501	100	-	.	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 1102 1391 +
Chr2	stalkie_big_nohaplotig	exon	156181597	156181733	100	-	.	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 965 1101 +
Chr2	stalkie_big_nohaplotig	exon	156181809	156182033	99	-	.	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 740 964 +
Chr2	stalkie_big_nohaplotig	exon	156186785	156186985	100	-	.	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 539 739 +
Chr2	stalkie_big_nohaplotig	exon	156187321	156187405	100	-	.	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 454 538 +
Chr2	stalkie_big_nohaplotig	exon	156187511	156187617	100	-	.	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 347 453 +
Chr2	stalkie_big_nohaplotig	exon	156187803	156187905	100	-	.	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 244 346 +
Chr2	stalkie_big_nohaplotig	exon	156188025	156188104	100	-	.	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 164 243 +
Chr2	stalkie_big_nohaplotig	CDS	156170624	156170776	.	-	0	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 2902 3054 +
Chr2	stalkie_big_nohaplotig	CDS	156176027	156176134	.	-	0	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 2794 2901 +
Chr2	stalkie_big_nohaplotig	CDS	156176280	156176436	.	-	1	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 2637 2793 +
Chr2	stalkie_big_nohaplotig	CDS	156176493	156176781	.	-	2	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 2348 2636 +
Chr2	stalkie_big_nohaplotig	CDS	156179244	156179498	.	-	2	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 2093 2347 +
Chr2	stalkie_big_nohaplotig	CDS	156179569	156179717	.	-	1	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 1944 2092 +
Chr2	stalkie_big_nohaplotig	CDS	156180501	156180730	.	-	0	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 1714 1943 +
Chr2	stalkie_big_nohaplotig	CDS	156180814	156181135	.	-	1	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 1392 1713 +
Chr2	stalkie_big_nohaplotig	CDS	156181212	156181501	.	-	0	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 1102 1391 +
Chr2	stalkie_big_nohaplotig	CDS	156181597	156181733	.	-	2	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 965 1101 +
Chr2	stalkie_big_nohaplotig	CDS	156181809	156182033	.	-	2	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 740 964 +
Chr2	stalkie_big_nohaplotig	CDS	156186785	156186985	.	-	2	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 539 739 +
Chr2	stalkie_big_nohaplotig	CDS	156187321	156187405	.	-	0	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 454 538 +
Chr2	stalkie_big_nohaplotig	CDS	156187511	156187617	.	-	2	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 347 453 +
Chr2	stalkie_big_nohaplotig	CDS	156187803	156187905	.	-	0	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 244 346 +
Chr2	stalkie_big_nohaplotig	CDS	156188025	156188102	.	-	0	Parent=FBgn0051140.1.mrna1;Target=FBgn0051140.1 166 243 +
Chr2	stalkie_big_nohaplotig	mRNA	156171552	156213963	.	-	.	ID=comp156894_c1_seq1.mrna1;geneID=comp156894_c1_seq1.path1;Name=comp156894_c1_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=5098;mismatches=4;indels=2;unknowns=0;locus=RLOC_00023076
Chr2	stalkie_big_nohaplotig	exon	156171552	156173106	99	-	.	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 3550 5103 +
Chr2	stalkie_big_nohaplotig	exon	156176027	156176134	100	-	.	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 3442 3549 +
Chr2	stalkie_big_nohaplotig	exon	156176280	156176436	100	-	.	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 3285 3441 +
Chr2	stalkie_big_nohaplotig	exon	156176493	156176781	100	-	.	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 2996 3284 +
Chr2	stalkie_big_nohaplotig	exon	156179244	156179498	100	-	.	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 2741 2995 +
Chr2	stalkie_big_nohaplotig	exon	156179569	156179717	100	-	.	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 2592 2740 +
Chr2	stalkie_big_nohaplotig	exon	156180501	156180730	100	-	.	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 2362 2591 +
Chr2	stalkie_big_nohaplotig	exon	156180814	156181135	100	-	.	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 2040 2361 +
Chr2	stalkie_big_nohaplotig	exon	156181212	156181501	100	-	.	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 1750 2039 +
Chr2	stalkie_big_nohaplotig	exon	156181597	156181733	100	-	.	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 1613 1749 +
Chr2	stalkie_big_nohaplotig	exon	156181809	156182033	99	-	.	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 1388 1612 +
Chr2	stalkie_big_nohaplotig	exon	156186785	156186985	100	-	.	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 1187 1387 +
Chr2	stalkie_big_nohaplotig	exon	156187321	156187405	100	-	.	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 1102 1186 +
Chr2	stalkie_big_nohaplotig	exon	156187511	156187617	100	-	.	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 995 1101 +
Chr2	stalkie_big_nohaplotig	exon	156187803	156187905	100	-	.	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 892 994 +
Chr2	stalkie_big_nohaplotig	exon	156188025	156188104	100	-	.	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 812 891 +
Chr2	stalkie_big_nohaplotig	exon	156213154	156213963	99	-	.	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 1 811 +
Chr2	stalkie_big_nohaplotig	CDS	156172882	156173106	.	-	0	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 3550 3774 +
Chr2	stalkie_big_nohaplotig	CDS	156176027	156176134	.	-	0	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 3442 3549 +
Chr2	stalkie_big_nohaplotig	CDS	156176280	156176436	.	-	1	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 3285 3441 +
Chr2	stalkie_big_nohaplotig	CDS	156176493	156176781	.	-	2	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 2996 3284 +
Chr2	stalkie_big_nohaplotig	CDS	156179244	156179498	.	-	2	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 2741 2995 +
Chr2	stalkie_big_nohaplotig	CDS	156179569	156179717	.	-	1	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 2592 2740 +
Chr2	stalkie_big_nohaplotig	CDS	156180501	156180730	.	-	0	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 2362 2591 +
Chr2	stalkie_big_nohaplotig	CDS	156180814	156181135	.	-	1	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 2040 2361 +
Chr2	stalkie_big_nohaplotig	CDS	156181212	156181501	.	-	0	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 1750 2039 +
Chr2	stalkie_big_nohaplotig	CDS	156181597	156181733	.	-	2	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 1613 1749 +
Chr2	stalkie_big_nohaplotig	CDS	156181809	156182033	.	-	2	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 1388 1612 +
Chr2	stalkie_big_nohaplotig	CDS	156186785	156186985	.	-	2	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 1187 1387 +
Chr2	stalkie_big_nohaplotig	CDS	156187321	156187405	.	-	0	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 1102 1186 +
Chr2	stalkie_big_nohaplotig	CDS	156187511	156187617	.	-	2	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 995 1101 +
Chr2	stalkie_big_nohaplotig	CDS	156187803	156187905	.	-	0	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 892 994 +
Chr2	stalkie_big_nohaplotig	CDS	156188025	156188104	.	-	2	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 812 891 +
Chr2	stalkie_big_nohaplotig	CDS	156213154	156213265	.	-	0	Parent=comp156894_c1_seq1.mrna1;Target=comp156894_c1_seq1 700 811 +
Chr2	gffcl	locus	156178070	156178429	.	+	.	ID=RLOC_00023077;geneIDs=comp140824_c0_seq1.path1;transcripts=comp140824_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156178070	156178429	.	+	.	ID=comp140824_c0_seq1.mrna1;geneID=comp140824_c0_seq1.path1;Name=comp140824_c0_seq1;Dir=indeterminatecoverage=99.4;identity=100.0;matches=360;mismatches=0;indels=0;unknowns=0;Target=comp140824_c0_seq1 362 3 .;CDS_Target=comp140824_c0_seq1 199 77 .;locus=RLOC_00023077
Chr2	stalkie_big_nohaplotig	exon	156178070	156178429	100	+	.	Parent=comp140824_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156178144	156178266	.	+	0	Parent=comp140824_c0_seq1.mrna1
Chr2	gffcl	locus	156222079	156228098	.	-	.	ID=RLOC_00023079;geneIDs=FBgn0039132.1.path1;transcripts=FBgn0039132.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156222079	156228098	.	-	.	ID=FBgn0039132.1.mrna1;geneID=FBgn0039132.1.path1;Name=FBgn0039132.1;Dir=sensecoverage=100.0;identity=100.0;matches=480;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023079
Chr2	stalkie_big_nohaplotig	exon	156222079	156222120	100	-	.	Parent=FBgn0039132.1.mrna1;Target=FBgn0039132.1 439 480 +
Chr2	stalkie_big_nohaplotig	exon	156227339	156227476	100	-	.	Parent=FBgn0039132.1.mrna1;Target=FBgn0039132.1 301 438 +
Chr2	stalkie_big_nohaplotig	exon	156227609	156227717	100	-	.	Parent=FBgn0039132.1.mrna1;Target=FBgn0039132.1 192 300 +
Chr2	stalkie_big_nohaplotig	exon	156227779	156227957	100	-	.	Parent=FBgn0039132.1.mrna1;Target=FBgn0039132.1 13 191 +
Chr2	stalkie_big_nohaplotig	exon	156228087	156228098	100	-	.	Parent=FBgn0039132.1.mrna1;Target=FBgn0039132.1 1 12 +
Chr2	stalkie_big_nohaplotig	CDS	156222079	156222120	.	-	0	Parent=FBgn0039132.1.mrna1;Target=FBgn0039132.1 439 480 +
Chr2	stalkie_big_nohaplotig	CDS	156227339	156227476	.	-	0	Parent=FBgn0039132.1.mrna1;Target=FBgn0039132.1 301 438 +
Chr2	stalkie_big_nohaplotig	CDS	156227609	156227717	.	-	1	Parent=FBgn0039132.1.mrna1;Target=FBgn0039132.1 192 300 +
Chr2	stalkie_big_nohaplotig	CDS	156227779	156227957	.	-	0	Parent=FBgn0039132.1.mrna1;Target=FBgn0039132.1 13 191 +
Chr2	stalkie_big_nohaplotig	CDS	156228087	156228098	.	-	0	Parent=FBgn0039132.1.mrna1;Target=FBgn0039132.1 1 12 +
Chr2	gffcl	locus	156223006	156225074	.	+	.	ID=RLOC_00023080;geneIDs=comp163863_c0_seq1.path1;transcripts=comp163863_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156223006	156225074	.	+	.	ID=comp163863_c0_seq1.mrna1;geneID=comp163863_c0_seq1.path1;Name=comp163863_c0_seq1;Dir=indeterminatecoverage=57.4;identity=98.6;matches=2046;mismatches=14;indels=16;unknowns=0;Target=comp163863_c0_seq1 2101 35 .;CDS_Target=comp163863_c0_seq1 118 35 .;locus=RLOC_00023080
Chr2	stalkie_big_nohaplotig	exon	156223006	156225074	98	+	.	Parent=comp163863_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156223006	156223089	.	+	0	Parent=comp163863_c0_seq1.mrna1
Chr2	gffcl	locus	156226666	156227137	.	+	.	ID=RLOC_00023081;geneIDs=comp141060_c0_seq1.path1;transcripts=comp141060_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156226666	156227137	.	+	.	ID=comp141060_c0_seq1.mrna1;geneID=comp141060_c0_seq1.path1;Name=comp141060_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=469;mismatches=3;indels=0;unknowns=0;Target=comp141060_c0_seq1 472 1 .;CDS_Target=comp141060_c0_seq1 107 3 .;locus=RLOC_00023081
Chr2	stalkie_big_nohaplotig	exon	156226666	156227137	99	+	.	Parent=comp141060_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156226668	156226772	.	+	0	Parent=comp141060_c0_seq1.mrna1
Chr2	gffcl	locus	156245917	156248043	.	-	.	ID=RLOC_00023082;geneIDs=FBgn0086605.1.path1,comp152478_c0_seq1.path1;transcripts=FBgn0086605.1.mrna1,comp152478_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156245917	156248043	.	-	.	ID=FBgn0086605.1.mrna1;geneID=FBgn0086605.1.path1;Name=FBgn0086605.1;Dir=sensecoverage=100.0;identity=100.0;matches=1008;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023082
Chr2	stalkie_big_nohaplotig	exon	156245917	156246549	100	-	.	Parent=FBgn0086605.1.mrna1;Target=FBgn0086605.1 376 1008 +
Chr2	stalkie_big_nohaplotig	exon	156247669	156248043	100	-	.	Parent=FBgn0086605.1.mrna1;Target=FBgn0086605.1 1 375 +
Chr2	stalkie_big_nohaplotig	CDS	156245917	156246549	.	-	0	Parent=FBgn0086605.1.mrna1;Target=FBgn0086605.1 376 1008 +
Chr2	stalkie_big_nohaplotig	CDS	156247669	156248043	.	-	0	Parent=FBgn0086605.1.mrna1;Target=FBgn0086605.1 1 375 +
Chr2	stalkie_big_nohaplotig	mRNA	156246527	156247370	.	-	.	ID=comp152478_c0_seq1.mrna1;geneID=comp152478_c0_seq1.path1;Name=comp152478_c0_seq1;Dir=antisensecoverage=100.0;identity=99.0;matches=500;mismatches=1;indels=4;unknowns=0;Target=comp152478_c0_seq1 393 500 .;locus=RLOC_00023082
Chr2	stalkie_big_nohaplotig	exon	156246527	156246549	100	-	.	Parent=comp152478_c0_seq1.mrna1;Target=comp152478_c0_seq1 1 23 -
Chr2	stalkie_big_nohaplotig	exon	156246889	156247370	98	-	.	Parent=comp152478_c0_seq1.mrna1;Target=comp152478_c0_seq1 24 501 -
Chr2	stalkie_big_nohaplotig	CDS	156247262	156247369	.	-	0	Parent=comp152478_c0_seq1.mrna1
Chr2	gffcl	locus	156249609	156250724	.	+	.	ID=RLOC_00023083;geneIDs=FBgn0037244.1.path1;transcripts=FBgn0037244.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156249609	156250724	.	+	.	ID=FBgn0037244.1.mrna1;geneID=FBgn0037244.1.path1;Name=FBgn0037244.1;Dir=sensecoverage=100.0;identity=99.9;matches=1052;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023083
Chr2	stalkie_big_nohaplotig	exon	156249609	156250217	99	+	.	Parent=FBgn0037244.1.mrna1;Target=FBgn0037244.1 1 609 +
Chr2	stalkie_big_nohaplotig	exon	156250281	156250724	100	+	.	Parent=FBgn0037244.1.mrna1;Target=FBgn0037244.1 610 1053 +
Chr2	stalkie_big_nohaplotig	CDS	156249609	156250217	.	+	0	Parent=FBgn0037244.1.mrna1;Target=FBgn0037244.1 1 609 +
Chr2	stalkie_big_nohaplotig	CDS	156250281	156250724	.	+	0	Parent=FBgn0037244.1.mrna1;Target=FBgn0037244.1 610 1053 +
Chr2	gffcl	locus	156252929	156265328	.	+	.	ID=RLOC_00023084;geneIDs=FBgn0263594.3.path1;transcripts=FBgn0263594.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156252929	156265328	.	+	.	ID=FBgn0263594.3.mrna1;geneID=FBgn0263594.3.path1;Name=FBgn0263594.3;Dir=sensecoverage=99.9;identity=99.8;matches=1725;mismatches=3;indels=1;unknowns=0;locus=RLOC_00023084
Chr2	stalkie_big_nohaplotig	exon	156252929	156253187	99	+	.	Parent=FBgn0263594.3.mrna1;Target=FBgn0263594.3 3 262 +
Chr2	stalkie_big_nohaplotig	exon	156261601	156261771	99	+	.	Parent=FBgn0263594.3.mrna1;Target=FBgn0263594.3 263 433 +
Chr2	stalkie_big_nohaplotig	exon	156261850	156262050	100	+	.	Parent=FBgn0263594.3.mrna1;Target=FBgn0263594.3 434 634 +
Chr2	stalkie_big_nohaplotig	exon	156262923	156263098	99	+	.	Parent=FBgn0263594.3.mrna1;Target=FBgn0263594.3 635 810 +
Chr2	stalkie_big_nohaplotig	exon	156264211	156264558	99	+	.	Parent=FBgn0263594.3.mrna1;Target=FBgn0263594.3 811 1158 +
Chr2	stalkie_big_nohaplotig	exon	156264629	156264697	100	+	.	Parent=FBgn0263594.3.mrna1;Target=FBgn0263594.3 1159 1227 +
Chr2	stalkie_big_nohaplotig	exon	156264764	156264977	100	+	.	Parent=FBgn0263594.3.mrna1;Target=FBgn0263594.3 1228 1441 +
Chr2	stalkie_big_nohaplotig	exon	156265039	156265328	100	+	.	Parent=FBgn0263594.3.mrna1;Target=FBgn0263594.3 1442 1731 +
Chr2	stalkie_big_nohaplotig	CDS	156253103	156253187	.	+	0	Parent=FBgn0263594.3.mrna1;Target=FBgn0263594.3 178 262 +
Chr2	stalkie_big_nohaplotig	CDS	156261601	156261771	.	+	2	Parent=FBgn0263594.3.mrna1;Target=FBgn0263594.3 263 433 +
Chr2	stalkie_big_nohaplotig	CDS	156261850	156262050	.	+	2	Parent=FBgn0263594.3.mrna1;Target=FBgn0263594.3 434 634 +
Chr2	stalkie_big_nohaplotig	CDS	156262923	156263098	.	+	2	Parent=FBgn0263594.3.mrna1;Target=FBgn0263594.3 635 810 +
Chr2	stalkie_big_nohaplotig	CDS	156264211	156264558	.	+	0	Parent=FBgn0263594.3.mrna1;Target=FBgn0263594.3 811 1158 +
Chr2	stalkie_big_nohaplotig	CDS	156264629	156264697	.	+	0	Parent=FBgn0263594.3.mrna1;Target=FBgn0263594.3 1159 1227 +
Chr2	stalkie_big_nohaplotig	CDS	156264764	156264977	.	+	0	Parent=FBgn0263594.3.mrna1;Target=FBgn0263594.3 1228 1441 +
Chr2	stalkie_big_nohaplotig	CDS	156265039	156265328	.	+	2	Parent=FBgn0263594.3.mrna1;Target=FBgn0263594.3 1442 1731 +
Chr2	gffcl	locus	156266303	156267242	.	-	.	ID=RLOC_00023085;geneIDs=comp156850_c0_seq1.path1;transcripts=comp156850_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156266303	156267242	.	-	.	ID=comp156850_c0_seq1.mrna1;geneID=comp156850_c0_seq1.path1;Name=comp156850_c0_seq1;Dir=indeterminatecoverage=99.3;identity=97.4;matches=916;mismatches=14;indels=10;unknowns=0;Target=comp156850_c0_seq1 937 8 .;CDS_Target=comp156850_c0_seq1 626 513 .;locus=RLOC_00023085
Chr2	stalkie_big_nohaplotig	exon	156266303	156267242	97	-	.	Parent=comp156850_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156266615	156266737	.	-	0	Parent=comp156850_c0_seq1.mrna1
Chr2	gffcl	locus	156318543	156319770	.	-	.	ID=RLOC_00023087;geneIDs=FBgn0003479.1.path1;transcripts=FBgn0003479.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156318543	156319770	.	-	.	ID=FBgn0003479.1.mrna1;geneID=FBgn0003479.1.path1;Name=FBgn0003479.1;Dir=sensecoverage=100.0;identity=99.6;matches=1058;mismatches=4;indels=0;unknowns=0;locus=RLOC_00023087
Chr2	stalkie_big_nohaplotig	exon	156318543	156318788	100	-	.	Parent=FBgn0003479.1.mrna1;Target=FBgn0003479.1 817 1062 +
Chr2	stalkie_big_nohaplotig	exon	156318847	156318976	99	-	.	Parent=FBgn0003479.1.mrna1;Target=FBgn0003479.1 687 816 +
Chr2	stalkie_big_nohaplotig	exon	156319030	156319586	99	-	.	Parent=FBgn0003479.1.mrna1;Target=FBgn0003479.1 130 686 +
Chr2	stalkie_big_nohaplotig	exon	156319642	156319770	99	-	.	Parent=FBgn0003479.1.mrna1;Target=FBgn0003479.1 1 129 +
Chr2	stalkie_big_nohaplotig	CDS	156318543	156318788	.	-	0	Parent=FBgn0003479.1.mrna1;Target=FBgn0003479.1 817 1062 +
Chr2	stalkie_big_nohaplotig	CDS	156318847	156318976	.	-	1	Parent=FBgn0003479.1.mrna1;Target=FBgn0003479.1 687 816 +
Chr2	stalkie_big_nohaplotig	CDS	156319030	156319586	.	-	0	Parent=FBgn0003479.1.mrna1;Target=FBgn0003479.1 130 686 +
Chr2	stalkie_big_nohaplotig	CDS	156319642	156319770	.	-	0	Parent=FBgn0003479.1.mrna1;Target=FBgn0003479.1 1 129 +
Chr2	gffcl	locus	156320165	156320523	.	+	.	ID=RLOC_00023088;geneIDs=FBgn0085346.1.path1;transcripts=FBgn0085346.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156320165	156320523	.	+	.	ID=FBgn0085346.1.mrna1;geneID=FBgn0085346.1.path1;Name=FBgn0085346.1;Dir=sensecoverage=100.0;identity=99.7;matches=305;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023088
Chr2	stalkie_big_nohaplotig	exon	156320165	156320202	100	+	.	Parent=FBgn0085346.1.mrna1;Target=FBgn0085346.1 1 38 +
Chr2	stalkie_big_nohaplotig	exon	156320256	156320523	99	+	.	Parent=FBgn0085346.1.mrna1;Target=FBgn0085346.1 39 306 +
Chr2	stalkie_big_nohaplotig	CDS	156320165	156320202	.	+	0	Parent=FBgn0085346.1.mrna1;Target=FBgn0085346.1 1 38 +
Chr2	stalkie_big_nohaplotig	CDS	156320256	156320523	.	+	1	Parent=FBgn0085346.1.mrna1;Target=FBgn0085346.1 39 306 +
Chr2	gffcl	locus	156320534	156320947	.	+	.	ID=RLOC_00023089;geneIDs=FBgn0260468.1.path1;transcripts=FBgn0260468.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156320534	156320947	.	+	.	ID=FBgn0260468.1.mrna1;geneID=FBgn0260468.1.path1;Name=FBgn0260468.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=413;mismatches=1;indels=0;unknowns=0;Target=FBgn0260468.1 414 1 .;locus=RLOC_00023089
Chr2	stalkie_big_nohaplotig	exon	156320534	156320947	99	+	.	Parent=FBgn0260468.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156320534	156320947	.	+	0	Parent=FBgn0260468.1.mrna1
Chr2	gffcl	locus	156335787	156336156	.	+	.	ID=RLOC_00023090;geneIDs=comp1152840_c0_seq1.path1;transcripts=comp1152840_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156335787	156336156	.	+	.	ID=comp1152840_c0_seq1.mrna1;geneID=comp1152840_c0_seq1.path1;Name=comp1152840_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=370;mismatches=0;indels=0;unknowns=0;Target=comp1152840_c0_seq1 370 1 .;CDS_Target=comp1152840_c0_seq1 370 2 .;locus=RLOC_00023090
Chr2	stalkie_big_nohaplotig	exon	156335787	156336156	100	+	.	Parent=comp1152840_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156335788	156336156	.	+	0	Parent=comp1152840_c0_seq1.mrna1
Chr2	gffcl	locus	156336172	156336512	.	-	.	ID=RLOC_00023091;geneIDs=comp68737_c0_seq1.path1;transcripts=comp68737_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156336172	156336512	.	-	.	ID=comp68737_c0_seq1.mrna1;geneID=comp68737_c0_seq1.path1;Name=comp68737_c0_seq1;Dir=indeterminatecoverage=93.4;identity=99.1;matches=338;mismatches=3;indels=0;unknowns=0;Target=comp68737_c0_seq1 365 25 .;CDS_Target=comp68737_c0_seq1 200 27 .;locus=RLOC_00023091
Chr2	stalkie_big_nohaplotig	exon	156336172	156336512	99	-	.	Parent=comp68737_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156336337	156336510	.	-	0	Parent=comp68737_c0_seq1.mrna1
Chr2	gffcl	locus	156412024	156414381	.	-	.	ID=RLOC_00023092;geneIDs=comp152485_c0_seq1.path1;transcripts=comp152485_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156412024	156414381	.	-	.	ID=comp152485_c0_seq1.mrna1;geneID=comp152485_c0_seq1.path1;Name=comp152485_c0_seq1;Dir=antisensecoverage=99.8;identity=99.2;matches=1877;mismatches=0;indels=16;unknowns=0;Target=comp152485_c0_seq1 1347 1517 .;locus=RLOC_00023092
Chr2	stalkie_big_nohaplotig	exon	156412024	156412257	100	-	.	Parent=comp152485_c0_seq1.mrna1;Target=comp152485_c0_seq1 4 237 -
Chr2	stalkie_big_nohaplotig	exon	156412317	156412533	100	-	.	Parent=comp152485_c0_seq1.mrna1;Target=comp152485_c0_seq1 238 454 -
Chr2	stalkie_big_nohaplotig	exon	156412948	156414381	98	-	.	Parent=comp152485_c0_seq1.mrna1;Target=comp152485_c0_seq1 455 1888 -
Chr2	stalkie_big_nohaplotig	CDS	156413840	156414010	.	-	0	Parent=comp152485_c0_seq1.mrna1
Chr2	gffcl	locus	156451125	156451538	.	-	.	ID=RLOC_00023093;geneIDs=comp99755_c0_seq1.path1;transcripts=comp99755_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156451125	156451538	.	-	.	ID=comp99755_c0_seq1.mrna1;geneID=comp99755_c0_seq1.path1;Name=comp99755_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.5;matches=412;mismatches=2;indels=0;unknowns=0;Target=comp99755_c0_seq1 414 1 .;CDS_Target=comp99755_c0_seq1 56 3 .;locus=RLOC_00023093
Chr2	stalkie_big_nohaplotig	exon	156451125	156451538	99	-	.	Parent=comp99755_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156451483	156451536	.	-	0	Parent=comp99755_c0_seq1.mrna1
Chr2	gffcl	locus	156463268	156464086	.	-	.	ID=RLOC_00023094;geneIDs=comp147194_c0_seq1.path1;transcripts=comp147194_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156463268	156464086	.	-	.	ID=comp147194_c0_seq1.mrna1;geneID=comp147194_c0_seq1.path1;Name=comp147194_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=808;mismatches=6;indels=5;unknowns=0;Target=comp147194_c0_seq1 814 1 .;CDS_Target=comp147194_c0_seq1 22 2 .;locus=RLOC_00023094
Chr2	stalkie_big_nohaplotig	exon	156463268	156464086	98	-	.	Parent=comp147194_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156464064	156464085	.	-	0	Parent=comp147194_c0_seq1.mrna1
Chr2	gffcl	locus	156474059	156474115	.	-	.	ID=RLOC_00023095;geneIDs=FBgn0039686.1.path1;transcripts=FBgn0039686.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156474059	156474115	.	-	.	ID=FBgn0039686.1.mrna1;geneID=FBgn0039686.1.path1;Name=FBgn0039686.1;Dir=indeterminatecoverage=6.0;identity=93.0;matches=53;mismatches=4;indels=0;unknowns=0;Target=FBgn0039686.1 57 1 .;locus=RLOC_00023095
Chr2	stalkie_big_nohaplotig	exon	156474059	156474115	92	-	.	Parent=FBgn0039686.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156474059	156474115	.	-	0	Parent=FBgn0039686.1.mrna1
Chr2	gffcl	locus	156474239	156474652	.	-	.	ID=RLOC_00023096;geneIDs=comp60084_c0_seq1.path1;transcripts=comp60084_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156474239	156474652	.	-	.	ID=comp60084_c0_seq1.mrna1;geneID=comp60084_c0_seq1.path1;Name=comp60084_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=413;mismatches=1;indels=0;unknowns=0;Target=comp60084_c0_seq1 414 1 .;CDS_Target=comp60084_c0_seq1 167 3 .;locus=RLOC_00023096
Chr2	stalkie_big_nohaplotig	exon	156474239	156474652	99	-	.	Parent=comp60084_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156474486	156474650	.	-	0	Parent=comp60084_c0_seq1.mrna1
Chr2	gffcl	locus	156481882	156485226	.	+	.	ID=RLOC_00023097;geneIDs=comp114145_c0_seq1.path1,comp125186_c0_seq1.path1;transcripts=comp125186_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156481882	156482736	.	+	.	ID=comp125186_c0_seq1.mrna1;geneID=comp125186_c0_seq1.path1;Name=comp125186_c0_seq1;Dir=sensecoverage=95.4;identity=99.2;matches=777;mismatches=0;indels=6;unknowns=0;locus=RLOC_00023097
Chr2	stalkie_big_nohaplotig	exon	156481882	156482163	98	+	.	Parent=comp125186_c0_seq1.mrna1;Target=comp125186_c0_seq1 20 306 +
Chr2	stalkie_big_nohaplotig	exon	156482242	156482736	99	+	.	Parent=comp125186_c0_seq1.mrna1;Target=comp125186_c0_seq1 307 802 +
Chr2	stalkie_big_nohaplotig	CDS	156482125	156482163	.	+	0	Parent=comp125186_c0_seq1.mrna1;Target=comp125186_c0_seq1 268 306 +
Chr2	stalkie_big_nohaplotig	CDS	156482242	156482489	.	+	0	Parent=comp125186_c0_seq1.mrna1;Target=comp125186_c0_seq1 307 555 +
Chr2	gffcl	locus	156485342	156487781	.	-	.	ID=RLOC_00023098;geneIDs=comp156124_c1_seq1.path1;transcripts=comp156124_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156485342	156487781	.	-	.	ID=comp156124_c1_seq1.mrna1;geneID=comp156124_c1_seq1.path1;Name=comp156124_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=2435;mismatches=5;indels=1;unknowns=0;Target=comp156124_c1_seq1 2441 1 .;CDS_Target=comp156124_c1_seq1 362 108 .;locus=RLOC_00023098
Chr2	stalkie_big_nohaplotig	exon	156485342	156487781	99	-	.	Parent=comp156124_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156487421	156487674	.	-	0	Parent=comp156124_c1_seq1.mrna1
Chr2	gffcl	locus	156518063	156526205	.	-	.	ID=RLOC_00023099;geneIDs=FBgn0039683.1.path1;transcripts=FBgn0039683.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156518063	156526205	.	-	.	ID=FBgn0039683.1.mrna1;geneID=FBgn0039683.1.path1;Name=FBgn0039683.1;Dir=sensecoverage=100.0;identity=99.4;matches=1408;mismatches=8;indels=0;unknowns=0;locus=RLOC_00023099
Chr2	stalkie_big_nohaplotig	exon	156518063	156518904	99	-	.	Parent=FBgn0039683.1.mrna1;Target=FBgn0039683.1 575 1416 +
Chr2	stalkie_big_nohaplotig	exon	156520720	156521017	100	-	.	Parent=FBgn0039683.1.mrna1;Target=FBgn0039683.1 277 574 +
Chr2	stalkie_big_nohaplotig	exon	156523246	156523347	100	-	.	Parent=FBgn0039683.1.mrna1;Target=FBgn0039683.1 175 276 +
Chr2	stalkie_big_nohaplotig	exon	156526032	156526205	98	-	.	Parent=FBgn0039683.1.mrna1;Target=FBgn0039683.1 1 174 +
Chr2	stalkie_big_nohaplotig	CDS	156518063	156518904	.	-	2	Parent=FBgn0039683.1.mrna1;Target=FBgn0039683.1 575 1416 +
Chr2	stalkie_big_nohaplotig	CDS	156520720	156521017	.	-	0	Parent=FBgn0039683.1.mrna1;Target=FBgn0039683.1 277 574 +
Chr2	stalkie_big_nohaplotig	CDS	156523246	156523347	.	-	0	Parent=FBgn0039683.1.mrna1;Target=FBgn0039683.1 175 276 +
Chr2	stalkie_big_nohaplotig	CDS	156526032	156526205	.	-	0	Parent=FBgn0039683.1.mrna1;Target=FBgn0039683.1 1 174 +
Chr2	gffcl	locus	156542531	156543241	.	+	.	ID=RLOC_00023100;geneIDs=FBgn0039682.1.path1;transcripts=FBgn0039682.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156542531	156543241	.	+	.	ID=FBgn0039682.1.mrna1;geneID=FBgn0039682.1.path1;Name=FBgn0039682.1;Dir=sensecoverage=100.0;identity=100.0;matches=639;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023100
Chr2	stalkie_big_nohaplotig	exon	156542531	156542764	100	+	.	Parent=FBgn0039682.1.mrna1;Target=FBgn0039682.1 1 234 +
Chr2	stalkie_big_nohaplotig	exon	156542837	156543241	100	+	.	Parent=FBgn0039682.1.mrna1;Target=FBgn0039682.1 235 639 +
Chr2	stalkie_big_nohaplotig	CDS	156542531	156542764	.	+	0	Parent=FBgn0039682.1.mrna1;Target=FBgn0039682.1 1 234 +
Chr2	stalkie_big_nohaplotig	CDS	156542837	156543241	.	+	0	Parent=FBgn0039682.1.mrna1;Target=FBgn0039682.1 235 639 +
Chr2	gffcl	locus	156585552	156586323	.	+	.	ID=RLOC_00023101;geneIDs=comp156591_c0_seq1.path3;transcripts=comp156591_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	156585552	156586323	.	+	.	ID=comp156591_c0_seq1.mrna3;geneID=comp156591_c0_seq1.path3;Name=comp156591_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=765;mismatches=6;indels=10;unknowns=0;Target=comp156591_c0_seq1 780 1 .;CDS_Target=comp156591_c0_seq1 105 1 .;locus=RLOC_00023101
Chr2	stalkie_big_nohaplotig	exon	156585552	156586323	97	+	.	Parent=comp156591_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	CDS	156585552	156585649	.	+	0	Parent=comp156591_c0_seq1.mrna3
Chr2	gffcl	locus	156586572	156598209	.	+	.	ID=RLOC_00023102;geneIDs=FBgn0015129.1.path1;transcripts=FBgn0015129.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156586572	156598209	.	+	.	ID=FBgn0015129.1.mrna1;geneID=FBgn0015129.1.path1;Name=FBgn0015129.1;Dir=sensecoverage=100.0;identity=99.9;matches=1696;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023102
Chr2	stalkie_big_nohaplotig	exon	156586572	156587844	100	+	.	Parent=FBgn0015129.1.mrna1;Target=FBgn0015129.1 1 1273 +
Chr2	stalkie_big_nohaplotig	exon	156588015	156588324	99	+	.	Parent=FBgn0015129.1.mrna1;Target=FBgn0015129.1 1274 1583 +
Chr2	stalkie_big_nohaplotig	exon	156588663	156588744	100	+	.	Parent=FBgn0015129.1.mrna1;Target=FBgn0015129.1 1584 1665 +
Chr2	stalkie_big_nohaplotig	exon	156598177	156598209	100	+	.	Parent=FBgn0015129.1.mrna1;Target=FBgn0015129.1 1666 1698 +
Chr2	stalkie_big_nohaplotig	CDS	156586572	156587844	.	+	0	Parent=FBgn0015129.1.mrna1;Target=FBgn0015129.1 1 1273 +
Chr2	stalkie_big_nohaplotig	CDS	156588015	156588324	.	+	2	Parent=FBgn0015129.1.mrna1;Target=FBgn0015129.1 1274 1583 +
Chr2	stalkie_big_nohaplotig	CDS	156588663	156588744	.	+	1	Parent=FBgn0015129.1.mrna1;Target=FBgn0015129.1 1584 1665 +
Chr2	stalkie_big_nohaplotig	CDS	156598177	156598209	.	+	0	Parent=FBgn0015129.1.mrna1;Target=FBgn0015129.1 1666 1698 +
Chr2	gffcl	locus	156592741	156593557	.	-	.	ID=RLOC_00023103;geneIDs=comp151941_c0_seq1.path1;transcripts=comp151941_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156592741	156593557	.	-	.	ID=comp151941_c0_seq1.mrna1;geneID=comp151941_c0_seq1.path1;Name=comp151941_c0_seq1;Dir=indeterminatecoverage=97.1;identity=99.3;matches=811;mismatches=5;indels=1;unknowns=0;Target=comp151941_c0_seq1 840 25 .;CDS_Target=comp151941_c0_seq1 450 343 .;locus=RLOC_00023103
Chr2	stalkie_big_nohaplotig	exon	156592741	156593557	99	-	.	Parent=comp151941_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156593131	156593238	.	-	0	Parent=comp151941_c0_seq1.mrna1
Chr2	gffcl	locus	156593755	156594344	.	+	.	ID=RLOC_00023104;geneIDs=comp154735_c0_seq1.path1;transcripts=comp154735_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156593755	156594344	.	+	.	ID=comp154735_c0_seq1.mrna1;geneID=comp154735_c0_seq1.path1;Name=comp154735_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=581;mismatches=9;indels=1;unknowns=0;Target=comp154735_c0_seq1 591 1 .;CDS_Target=comp154735_c0_seq1 475 437 .;locus=RLOC_00023104
Chr2	stalkie_big_nohaplotig	exon	156593755	156594344	98	+	.	Parent=comp154735_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156594191	156594229	.	+	0	Parent=comp154735_c0_seq1.mrna1
Chr2	gffcl	locus	156594512	156595455	.	-	.	ID=RLOC_00023105;geneIDs=comp145915_c0_seq1.path1;transcripts=comp145915_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156594512	156595455	.	-	.	ID=comp145915_c0_seq1.mrna1;geneID=comp145915_c0_seq1.path1;Name=comp145915_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=941;mismatches=3;indels=1;unknowns=0;Target=comp145915_c0_seq1 945 1 .;CDS_Target=comp145915_c0_seq1 197 150 .;locus=RLOC_00023105
Chr2	stalkie_big_nohaplotig	exon	156594512	156595455	99	-	.	Parent=comp145915_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156595259	156595306	.	-	0	Parent=comp145915_c0_seq1.mrna1
Chr2	gffcl	locus	156607232	156608191	.	-	.	ID=RLOC_00023106;geneIDs=FBgn0039674.2.path1;transcripts=FBgn0039674.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156607232	156608191	.	-	.	ID=FBgn0039674.2.mrna1;geneID=FBgn0039674.2.path1;Name=FBgn0039674.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=960;mismatches=0;indels=0;unknowns=0;Target=FBgn0039674.2 960 1 .;locus=RLOC_00023106
Chr2	stalkie_big_nohaplotig	exon	156607232	156608191	100	-	.	Parent=FBgn0039674.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156607232	156608191	.	-	0	Parent=FBgn0039674.2.mrna1
Chr2	gffcl	locus	156616387	156748558	.	.	.	ID=RLOC_00023107;geneIDs=FBgn0086361.1.path1,comp154887_c0_seq1.path1,comp156384_c0_seq1.path1,comp159608_c3_seq1.path1;transcripts=comp159608_c3_seq1.mrna1,comp156384_c0_seq1.mrna1,FBgn0086361.1.mrna1,comp154887_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156616387	156748558	.	+	.	ID=comp159608_c3_seq1.mrna1;geneID=comp159608_c3_seq1.path1;Name=comp159608_c3_seq1;Dir=indeterminatecoverage=74.8;identity=97.8;matches=1636;mismatches=15;indels=22;unknowns=0;locus=RLOC_00023107
Chr2	stalkie_big_nohaplotig	exon	156616387	156616392	100	+	.	Parent=comp159608_c3_seq1.mrna1;Target=comp159608_c3_seq1 570 565 .
Chr2	stalkie_big_nohaplotig	exon	156632160	156632162	100	+	.	Parent=comp159608_c3_seq1.mrna1;Target=comp159608_c3_seq1 573 571 .
Chr2	stalkie_big_nohaplotig	exon	156637220	156637223	100	+	.	Parent=comp159608_c3_seq1.mrna1;Target=comp159608_c3_seq1 577 574 .
Chr2	stalkie_big_nohaplotig	exon	156642536	156642537	100	+	.	Parent=comp159608_c3_seq1.mrna1;Target=comp159608_c3_seq1 579 578 .
Chr2	stalkie_big_nohaplotig	exon	156648546	156648589	54	+	.	Parent=comp159608_c3_seq1.mrna1;Target=comp159608_c3_seq1 641 580 .
Chr2	stalkie_big_nohaplotig	exon	156693729	156693745	76	+	.	Parent=comp159608_c3_seq1.mrna1;Target=comp159608_c3_seq1 656 642 .
Chr2	stalkie_big_nohaplotig	exon	156699384	156699389	100	+	.	Parent=comp159608_c3_seq1.mrna1;Target=comp159608_c3_seq1 662 657 .
Chr2	stalkie_big_nohaplotig	exon	156711205	156711226	78	+	.	Parent=comp159608_c3_seq1.mrna1;Target=comp159608_c3_seq1 684 663 .
Chr2	stalkie_big_nohaplotig	exon	156736669	156736891	100	+	.	Parent=comp159608_c3_seq1.mrna1;Target=comp159608_c3_seq1 907 685 .
Chr2	stalkie_big_nohaplotig	exon	156741160	156742123	100	+	.	Parent=comp159608_c3_seq1.mrna1;Target=comp159608_c3_seq1 1871 908 .
Chr2	stalkie_big_nohaplotig	exon	156742191	156742340	100	+	.	Parent=comp159608_c3_seq1.mrna1;Target=comp159608_c3_seq1 2021 1872 .
Chr2	stalkie_big_nohaplotig	exon	156747442	156747486	100	+	.	Parent=comp159608_c3_seq1.mrna1;Target=comp159608_c3_seq1 2066 2022 .
Chr2	stalkie_big_nohaplotig	exon	156747550	156747667	100	+	.	Parent=comp159608_c3_seq1.mrna1;Target=comp159608_c3_seq1 2184 2067 .
Chr2	stalkie_big_nohaplotig	exon	156748509	156748558	100	+	.	Parent=comp159608_c3_seq1.mrna1;Target=comp159608_c3_seq1 2234 2185 .
Chr2	stalkie_big_nohaplotig	CDS	156616387	156616392	.	+	0	Parent=comp159608_c3_seq1.mrna1;Target=comp159608_c3_seq1 570 565 .
Chr2	stalkie_big_nohaplotig	CDS	156632160	156632162	.	+	0	Parent=comp159608_c3_seq1.mrna1;Target=comp159608_c3_seq1 573 571 .
Chr2	stalkie_big_nohaplotig	CDS	156637220	156637223	.	+	0	Parent=comp159608_c3_seq1.mrna1;Target=comp159608_c3_seq1 577 574 .
Chr2	stalkie_big_nohaplotig	CDS	156642536	156642537	.	+	2	Parent=comp159608_c3_seq1.mrna1;Target=comp159608_c3_seq1 579 578 .
Chr2	stalkie_big_nohaplotig	CDS	156648546	156648569	.	+	0	Parent=comp159608_c3_seq1.mrna1;Target=comp159608_c3_seq1 618 580 .
Chr2	stalkie_big_nohaplotig	mRNA	156642379	156644115	.	-	.	ID=comp156384_c0_seq1.mrna1;geneID=comp156384_c0_seq1.path1;Name=comp156384_c0_seq1;Dir=indeterminatecoverage=98.7;identity=98.9;matches=1736;mismatches=1;indels=18;unknowns=0;Target=comp156384_c0_seq1 1779 25 .;CDS_Target=comp156384_c0_seq1 965 786 .;locus=RLOC_00023107
Chr2	stalkie_big_nohaplotig	exon	156642379	156644115	98	-	.	Parent=comp156384_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156643193	156643360	.	-	0	Parent=comp156384_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156647219	156650684	.	-	.	ID=FBgn0086361.1.mrna1;geneID=FBgn0086361.1.path1;Name=FBgn0086361.1;Dir=sensecoverage=98.9;identity=100.0;matches=1098;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023107
Chr2	stalkie_big_nohaplotig	exon	156647219	156647273	100	-	.	Parent=FBgn0086361.1.mrna1;Target=FBgn0086361.1 1044 1098 +
Chr2	stalkie_big_nohaplotig	exon	156647421	156647523	100	-	.	Parent=FBgn0086361.1.mrna1;Target=FBgn0086361.1 941 1043 +
Chr2	stalkie_big_nohaplotig	exon	156649676	156649793	100	-	.	Parent=FBgn0086361.1.mrna1;Target=FBgn0086361.1 823 940 +
Chr2	stalkie_big_nohaplotig	exon	156649863	156650684	100	-	.	Parent=FBgn0086361.1.mrna1;Target=FBgn0086361.1 1 822 +
Chr2	stalkie_big_nohaplotig	CDS	156647219	156647273	.	-	1	Parent=FBgn0086361.1.mrna1;Target=FBgn0086361.1 1044 1098 +
Chr2	stalkie_big_nohaplotig	CDS	156647421	156647523	.	-	2	Parent=FBgn0086361.1.mrna1;Target=FBgn0086361.1 941 1043 +
Chr2	stalkie_big_nohaplotig	CDS	156649676	156649793	.	-	0	Parent=FBgn0086361.1.mrna1;Target=FBgn0086361.1 823 940 +
Chr2	stalkie_big_nohaplotig	CDS	156649863	156650684	.	-	0	Parent=FBgn0086361.1.mrna1;Target=FBgn0086361.1 1 822 +
Chr2	stalkie_big_nohaplotig	mRNA	156648397	156649699	.	+	.	ID=comp154887_c0_seq1.mrna1;geneID=comp154887_c0_seq1.path1;Name=comp154887_c0_seq1;Dir=indeterminatecoverage=98.5;identity=97.6;matches=1273;mismatches=12;indels=19;unknowns=0;Target=comp154887_c0_seq1 1305 20 .;CDS_Target=comp154887_c0_seq1 742 722 .;locus=RLOC_00023107
Chr2	stalkie_big_nohaplotig	exon	156648397	156649699	97	+	.	Parent=comp154887_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156649116	156649136	.	+	0	Parent=comp154887_c0_seq1.mrna1
Chr2	gffcl	locus	156640354	156642183	.	+	.	ID=RLOC_00023108;geneIDs=FBgn0039673.1.path1;transcripts=FBgn0039673.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156640354	156642183	.	+	.	ID=FBgn0039673.1.mrna1;geneID=FBgn0039673.1.path1;Name=FBgn0039673.1;Dir=sensecoverage=100.0;identity=100.0;matches=1384;mismatches=0;indels=0;unknowns=11;locus=RLOC_00023108
Chr2	stalkie_big_nohaplotig	exon	156640354	156640430	100	+	.	Parent=FBgn0039673.1.mrna1;Target=FBgn0039673.1 1 77 +
Chr2	stalkie_big_nohaplotig	exon	156640485	156640988	100	+	.	Parent=FBgn0039673.1.mrna1;Target=FBgn0039673.1 78 581 +
Chr2	stalkie_big_nohaplotig	exon	156641058	156641375	100	+	.	Parent=FBgn0039673.1.mrna1;Target=FBgn0039673.1 582 899 +
Chr2	stalkie_big_nohaplotig	exon	156641628	156641928	100	+	.	Parent=FBgn0039673.1.mrna1;Target=FBgn0039673.1 900 1200 +
Chr2	stalkie_big_nohaplotig	exon	156641989	156642183	100	+	.	Parent=FBgn0039673.1.mrna1;Target=FBgn0039673.1 1201 1395 +
Chr2	stalkie_big_nohaplotig	CDS	156640354	156640430	.	+	0	Parent=FBgn0039673.1.mrna1;Target=FBgn0039673.1 1 77 +
Chr2	stalkie_big_nohaplotig	CDS	156640485	156640988	.	+	1	Parent=FBgn0039673.1.mrna1;Target=FBgn0039673.1 78 581 +
Chr2	stalkie_big_nohaplotig	CDS	156641058	156641375	.	+	1	Parent=FBgn0039673.1.mrna1;Target=FBgn0039673.1 582 899 +
Chr2	stalkie_big_nohaplotig	CDS	156641628	156641928	.	+	1	Parent=FBgn0039673.1.mrna1;Target=FBgn0039673.1 900 1200 +
Chr2	stalkie_big_nohaplotig	CDS	156641989	156642183	.	+	0	Parent=FBgn0039673.1.mrna1;Target=FBgn0039673.1 1201 1395 +
Chr2	gffcl	locus	156788015	156790701	.	+	.	ID=RLOC_00023109;geneIDs=FBgn0035689.1.path2;transcripts=FBgn0035689.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	156788015	156790701	.	+	.	ID=FBgn0035689.1.mrna2;geneID=FBgn0035689.1.path2;Name=FBgn0035689.1;Dir=indeterminatecoverage=99.4;identity=99.3;matches=2667;mismatches=20;indels=0;unknowns=0;Target=FBgn0035689.1 2687 1 .;CDS_Target=FBgn0035689.1 2685 1 .;locus=RLOC_00023109
Chr2	stalkie_big_nohaplotig	exon	156788015	156790701	99	+	.	Parent=FBgn0035689.1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	156788015	156790699	.	+	0	Parent=FBgn0035689.1.mrna2
Chr2	gffcl	locus	156833337	156833932	.	-	.	ID=RLOC_00023110;geneIDs=comp143010_c0_seq1.path1;transcripts=comp143010_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156833337	156833932	.	-	.	ID=comp143010_c0_seq1.mrna1;geneID=comp143010_c0_seq1.path1;Name=comp143010_c0_seq1;Dir=antisensecoverage=99.6;identity=99.6;matches=443;mismatches=2;indels=0;unknowns=0;Target=comp143010_c0_seq1 65 118 .;locus=RLOC_00023110
Chr2	stalkie_big_nohaplotig	exon	156833337	156833717	100	-	.	Parent=comp143010_c0_seq1.mrna1;Target=comp143010_c0_seq1 2 382 -
Chr2	stalkie_big_nohaplotig	exon	156833869	156833932	96	-	.	Parent=comp143010_c0_seq1.mrna1;Target=comp143010_c0_seq1 383 446 -
Chr2	stalkie_big_nohaplotig	CDS	156833400	156833453	.	-	0	Parent=comp143010_c0_seq1.mrna1
Chr2	gffcl	locus	156842455	156843209	.	+	.	ID=RLOC_00023111;geneIDs=comp163154_c0_seq1.path1;transcripts=comp163154_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156842455	156843209	.	+	.	ID=comp163154_c0_seq1.mrna1;geneID=comp163154_c0_seq1.path1;Name=comp163154_c0_seq1;Dir=indeterminatecoverage=99.9;identity=96.9;matches=738;mismatches=17;indels=7;unknowns=0;Target=comp163154_c0_seq1 763 2 .;CDS_Target=comp163154_c0_seq1 533 423 .;locus=RLOC_00023111
Chr2	stalkie_big_nohaplotig	exon	156842455	156843209	96	+	.	Parent=comp163154_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156842869	156842979	.	+	0	Parent=comp163154_c0_seq1.mrna1
Chr2	gffcl	locus	156848234	156849438	.	+	.	ID=RLOC_00023112;geneIDs=comp153610_c1_seq1.path1;transcripts=comp153610_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156848234	156849438	.	+	.	ID=comp153610_c1_seq1.mrna1;geneID=comp153610_c1_seq1.path1;Name=comp153610_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1203;mismatches=1;indels=1;unknowns=0;Target=comp153610_c1_seq1 1204 1 .;CDS_Target=comp153610_c1_seq1 274 86 .;locus=RLOC_00023112
Chr2	stalkie_big_nohaplotig	exon	156848234	156849438	99	+	.	Parent=comp153610_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156848319	156848507	.	+	0	Parent=comp153610_c1_seq1.mrna1
Chr2	gffcl	locus	156865102	156866423	.	+	.	ID=RLOC_00023113;geneIDs=ORF956.path2;transcripts=ORF956.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	156865102	156866423	.	+	.	ID=ORF956.mrna2;geneID=ORF956.path2;Name=ORF956;Dir=indeterminatecoverage=100.0;identity=97.7;matches=1297;mismatches=24;indels=6;unknowns=0;Target=ORF956 1326 1 .;locus=RLOC_00023113
Chr2	stalkie_big_nohaplotig	exon	156865102	156866423	97	+	.	Parent=ORF956.mrna2
Chr2	stalkie_big_nohaplotig	CDS	156865102	156866423	.	+	0	Parent=ORF956.mrna2
Chr2	gffcl	locus	156885301	156886467	.	-	.	ID=RLOC_00023114;geneIDs=comp145130_c0_seq1.path1;transcripts=comp145130_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156885301	156886467	.	-	.	ID=comp145130_c0_seq1.mrna1;geneID=comp145130_c0_seq1.path1;Name=comp145130_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1167;mismatches=0;indels=0;unknowns=0;Target=comp145130_c0_seq1 1167 1 .;CDS_Target=comp145130_c0_seq1 835 617 .;locus=RLOC_00023114
Chr2	stalkie_big_nohaplotig	exon	156885301	156886467	100	-	.	Parent=comp145130_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156885633	156885851	.	-	0	Parent=comp145130_c0_seq1.mrna1
Chr2	gffcl	locus	156888483	156889643	.	-	.	ID=RLOC_00023115;geneIDs=comp152884_c0_seq1.path1;transcripts=comp152884_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156888483	156889643	.	-	.	ID=comp152884_c0_seq1.mrna1;geneID=comp152884_c0_seq1.path1;Name=comp152884_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1155;mismatches=6;indels=8;unknowns=0;Target=comp152884_c0_seq1 1169 1 .;CDS_Target=comp152884_c0_seq1 109 50 .;locus=RLOC_00023115
Chr2	stalkie_big_nohaplotig	exon	156888483	156889643	98	-	.	Parent=comp152884_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156889543	156889594	.	-	0	Parent=comp152884_c0_seq1.mrna1
Chr2	gffcl	locus	156894666	156910991	.	-	.	ID=RLOC_00023116;geneIDs=FBgn0000492.1.path1;transcripts=FBgn0000492.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156894666	156910991	.	-	.	ID=FBgn0000492.1.mrna1;geneID=FBgn0000492.1.path1;Name=FBgn0000492.1;Dir=sensecoverage=100.0;identity=99.8;matches=1491;mismatches=3;indels=0;unknowns=0;locus=RLOC_00023116
Chr2	stalkie_big_nohaplotig	exon	156894666	156895000	100	-	.	Parent=FBgn0000492.1.mrna1;Target=FBgn0000492.1 1160 1494 +
Chr2	stalkie_big_nohaplotig	exon	156909833	156910991	99	-	.	Parent=FBgn0000492.1.mrna1;Target=FBgn0000492.1 1 1159 +
Chr2	stalkie_big_nohaplotig	CDS	156894666	156895000	.	-	2	Parent=FBgn0000492.1.mrna1;Target=FBgn0000492.1 1160 1494 +
Chr2	stalkie_big_nohaplotig	CDS	156909833	156910991	.	-	0	Parent=FBgn0000492.1.mrna1;Target=FBgn0000492.1 1 1159 +
Chr2	gffcl	locus	156932947	156933649	.	-	.	ID=RLOC_00023117;geneIDs=comp566281_c0_seq1.path1;transcripts=comp566281_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156932947	156933649	.	-	.	ID=comp566281_c0_seq1.mrna1;geneID=comp566281_c0_seq1.path1;Name=comp566281_c0_seq1;Dir=indeterminatecoverage=98.0;identity=98.9;matches=695;mismatches=8;indels=0;unknowns=0;Target=comp566281_c0_seq1 717 15 .;CDS_Target=comp566281_c0_seq1 334 203 .;locus=RLOC_00023117
Chr2	stalkie_big_nohaplotig	exon	156932947	156933649	98	-	.	Parent=comp566281_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156933330	156933461	.	-	0	Parent=comp566281_c0_seq1.mrna1
Chr2	gffcl	locus	156939946	156943736	.	-	.	ID=RLOC_00023118;geneIDs=comp142659_c4_seq1.path1;transcripts=comp142659_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156939946	156943736	.	-	.	ID=comp142659_c4_seq1.mrna1;geneID=comp142659_c4_seq1.path1;Name=comp142659_c4_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=1006;mismatches=0;indels=0;unknowns=0;Target=comp142659_c4_seq1 300 497 .;locus=RLOC_00023118
Chr2	stalkie_big_nohaplotig	exon	156939946	156940084	100	-	.	Parent=comp142659_c4_seq1.mrna1;Target=comp142659_c4_seq1 1 139 -
Chr2	stalkie_big_nohaplotig	exon	156941187	156941576	100	-	.	Parent=comp142659_c4_seq1.mrna1;Target=comp142659_c4_seq1 140 529 -
Chr2	stalkie_big_nohaplotig	exon	156943260	156943736	100	-	.	Parent=comp142659_c4_seq1.mrna1;Target=comp142659_c4_seq1 530 1006 -
Chr2	stalkie_big_nohaplotig	CDS	156941347	156941544	.	-	0	Parent=comp142659_c4_seq1.mrna1
Chr2	gffcl	locus	156996247	156996337	.	-	.	ID=RLOC_00023119;geneIDs=FBgn0027889.1.path1;transcripts=FBgn0027889.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156996247	156996337	.	-	.	ID=FBgn0027889.1.mrna1;geneID=FBgn0027889.1.path1;Name=FBgn0027889.1;Dir=indeterminatecoverage=5.4;identity=100.0;matches=91;mismatches=0;indels=0;unknowns=0;Target=FBgn0027889.1 91 1 .;locus=RLOC_00023119
Chr2	stalkie_big_nohaplotig	exon	156996247	156996337	100	-	.	Parent=FBgn0027889.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	156996247	156996337	.	-	0	Parent=FBgn0027889.1.mrna1
Chr2	gffcl	locus	156999540	157003016	.	.	.	ID=RLOC_00023120;geneIDs=FBgn0039668.1.path1,comp455243_c0_seq1.path1;transcripts=FBgn0039668.1.mrna1,comp455243_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	156999540	157003016	.	+	.	ID=FBgn0039668.1.mrna1;geneID=FBgn0039668.1.path1;Name=FBgn0039668.1;Dir=sensecoverage=100.0;identity=100.0;matches=2279;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023120
Chr2	stalkie_big_nohaplotig	exon	156999540	156999963	100	+	.	Parent=FBgn0039668.1.mrna1;Target=FBgn0039668.1 1 424 +
Chr2	stalkie_big_nohaplotig	exon	157000171	157000545	99	+	.	Parent=FBgn0039668.1.mrna1;Target=FBgn0039668.1 425 799 +
Chr2	stalkie_big_nohaplotig	exon	157000598	157000793	100	+	.	Parent=FBgn0039668.1.mrna1;Target=FBgn0039668.1 800 995 +
Chr2	stalkie_big_nohaplotig	exon	157000854	157001394	100	+	.	Parent=FBgn0039668.1.mrna1;Target=FBgn0039668.1 996 1536 +
Chr2	stalkie_big_nohaplotig	exon	157001456	157001630	100	+	.	Parent=FBgn0039668.1.mrna1;Target=FBgn0039668.1 1537 1711 +
Chr2	stalkie_big_nohaplotig	exon	157001954	157002150	100	+	.	Parent=FBgn0039668.1.mrna1;Target=FBgn0039668.1 1712 1908 +
Chr2	stalkie_big_nohaplotig	exon	157002579	157002770	100	+	.	Parent=FBgn0039668.1.mrna1;Target=FBgn0039668.1 1909 2100 +
Chr2	stalkie_big_nohaplotig	exon	157002837	157003016	100	+	.	Parent=FBgn0039668.1.mrna1;Target=FBgn0039668.1 2101 2280 +
Chr2	stalkie_big_nohaplotig	CDS	156999540	156999963	.	+	0	Parent=FBgn0039668.1.mrna1;Target=FBgn0039668.1 1 424 +
Chr2	stalkie_big_nohaplotig	CDS	157000171	157000545	.	+	2	Parent=FBgn0039668.1.mrna1;Target=FBgn0039668.1 425 799 +
Chr2	stalkie_big_nohaplotig	CDS	157000598	157000793	.	+	2	Parent=FBgn0039668.1.mrna1;Target=FBgn0039668.1 800 995 +
Chr2	stalkie_big_nohaplotig	CDS	157000854	157001394	.	+	1	Parent=FBgn0039668.1.mrna1;Target=FBgn0039668.1 996 1536 +
Chr2	stalkie_big_nohaplotig	CDS	157001456	157001630	.	+	0	Parent=FBgn0039668.1.mrna1;Target=FBgn0039668.1 1537 1711 +
Chr2	stalkie_big_nohaplotig	CDS	157001954	157002150	.	+	2	Parent=FBgn0039668.1.mrna1;Target=FBgn0039668.1 1712 1908 +
Chr2	stalkie_big_nohaplotig	CDS	157002579	157002770	.	+	0	Parent=FBgn0039668.1.mrna1;Target=FBgn0039668.1 1909 2100 +
Chr2	stalkie_big_nohaplotig	CDS	157002837	157003016	.	+	0	Parent=FBgn0039668.1.mrna1;Target=FBgn0039668.1 2101 2280 +
Chr2	stalkie_big_nohaplotig	mRNA	157001608	157001976	.	-	.	ID=comp455243_c0_seq1.mrna1;geneID=comp455243_c0_seq1.path1;Name=comp455243_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=369;mismatches=0;indels=0;unknowns=0;Target=comp455243_c0_seq1 369 1 .;CDS_Target=comp455243_c0_seq1 156 1 .;locus=RLOC_00023120
Chr2	stalkie_big_nohaplotig	exon	157001608	157001976	100	-	.	Parent=comp455243_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157001821	157001976	.	-	0	Parent=comp455243_c0_seq1.mrna1
Chr2	gffcl	locus	157003968	157008098	.	-	.	ID=RLOC_00023121;geneIDs=FBgn0039667.1.path1,comp117581_c0_seq1.path1;transcripts=FBgn0039667.1.mrna1,comp117581_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157003968	157008098	.	-	.	ID=FBgn0039667.1.mrna1;geneID=FBgn0039667.1.path1;Name=FBgn0039667.1;Dir=sensecoverage=100.0;identity=99.9;matches=1556;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023121
Chr2	stalkie_big_nohaplotig	exon	157003968	157004100	100	-	.	Parent=FBgn0039667.1.mrna1;Target=FBgn0039667.1 1425 1557 +
Chr2	stalkie_big_nohaplotig	exon	157005352	157005447	100	-	.	Parent=FBgn0039667.1.mrna1;Target=FBgn0039667.1 1329 1424 +
Chr2	stalkie_big_nohaplotig	exon	157005508	157005615	100	-	.	Parent=FBgn0039667.1.mrna1;Target=FBgn0039667.1 1221 1328 +
Chr2	stalkie_big_nohaplotig	exon	157005678	157005845	100	-	.	Parent=FBgn0039667.1.mrna1;Target=FBgn0039667.1 1053 1220 +
Chr2	stalkie_big_nohaplotig	exon	157005907	157006448	99	-	.	Parent=FBgn0039667.1.mrna1;Target=FBgn0039667.1 511 1052 +
Chr2	stalkie_big_nohaplotig	exon	157006508	157006584	100	-	.	Parent=FBgn0039667.1.mrna1;Target=FBgn0039667.1 434 510 +
Chr2	stalkie_big_nohaplotig	exon	157006648	157006972	100	-	.	Parent=FBgn0039667.1.mrna1;Target=FBgn0039667.1 109 433 +
Chr2	stalkie_big_nohaplotig	exon	157007991	157008098	100	-	.	Parent=FBgn0039667.1.mrna1;Target=FBgn0039667.1 1 108 +
Chr2	stalkie_big_nohaplotig	CDS	157003968	157004100	.	-	1	Parent=FBgn0039667.1.mrna1;Target=FBgn0039667.1 1425 1557 +
Chr2	stalkie_big_nohaplotig	CDS	157005352	157005447	.	-	1	Parent=FBgn0039667.1.mrna1;Target=FBgn0039667.1 1329 1424 +
Chr2	stalkie_big_nohaplotig	CDS	157005508	157005615	.	-	1	Parent=FBgn0039667.1.mrna1;Target=FBgn0039667.1 1221 1328 +
Chr2	stalkie_big_nohaplotig	CDS	157005678	157005845	.	-	1	Parent=FBgn0039667.1.mrna1;Target=FBgn0039667.1 1053 1220 +
Chr2	stalkie_big_nohaplotig	CDS	157005907	157006448	.	-	0	Parent=FBgn0039667.1.mrna1;Target=FBgn0039667.1 511 1052 +
Chr2	stalkie_big_nohaplotig	CDS	157006508	157006584	.	-	2	Parent=FBgn0039667.1.mrna1;Target=FBgn0039667.1 434 510 +
Chr2	stalkie_big_nohaplotig	CDS	157006648	157006972	.	-	0	Parent=FBgn0039667.1.mrna1;Target=FBgn0039667.1 109 433 +
Chr2	stalkie_big_nohaplotig	CDS	157007991	157008098	.	-	0	Parent=FBgn0039667.1.mrna1;Target=FBgn0039667.1 1 108 +
Chr2	stalkie_big_nohaplotig	mRNA	157004222	157005375	.	-	.	ID=comp117581_c0_seq1.mrna1;geneID=comp117581_c0_seq1.path1;Name=comp117581_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1154;mismatches=0;indels=0;unknowns=0;Target=comp117581_c0_seq1 1154 1 .;CDS_Target=comp117581_c0_seq1 884 687 .;locus=RLOC_00023121
Chr2	stalkie_big_nohaplotig	exon	157004222	157005375	100	-	.	Parent=comp117581_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157004492	157004689	.	-	0	Parent=comp117581_c0_seq1.mrna1
Chr2	gffcl	locus	157010514	157010718	.	+	.	ID=RLOC_00023122;geneIDs=comp135782_c0_seq1.path1;transcripts=comp135782_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157010514	157010718	.	+	.	ID=comp135782_c0_seq1.mrna1;geneID=comp135782_c0_seq1.path1;Name=comp135782_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=205;mismatches=0;indels=0;unknowns=0;Target=comp135782_c0_seq1 205 1 .;CDS_Target=comp135782_c0_seq1 48 1 .;locus=RLOC_00023122
Chr2	stalkie_big_nohaplotig	exon	157010514	157010718	100	+	.	Parent=comp135782_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157010514	157010561	.	+	0	Parent=comp135782_c0_seq1.mrna1
Chr2	gffcl	locus	157012428	157012938	.	+	.	ID=RLOC_00023123;geneIDs=FBgn0040623.1.path1;transcripts=FBgn0040623.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157012428	157012938	.	+	.	ID=FBgn0040623.1.mrna1;geneID=FBgn0040623.1.path1;Name=FBgn0040623.1;Dir=sensecoverage=100.0;identity=100.0;matches=297;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023123
Chr2	stalkie_big_nohaplotig	exon	157012428	157012463	100	+	.	Parent=FBgn0040623.1.mrna1;Target=FBgn0040623.1 1 36 +
Chr2	stalkie_big_nohaplotig	exon	157012611	157012757	100	+	.	Parent=FBgn0040623.1.mrna1;Target=FBgn0040623.1 37 183 +
Chr2	stalkie_big_nohaplotig	exon	157012825	157012938	100	+	.	Parent=FBgn0040623.1.mrna1;Target=FBgn0040623.1 184 297 +
Chr2	stalkie_big_nohaplotig	CDS	157012428	157012463	.	+	0	Parent=FBgn0040623.1.mrna1;Target=FBgn0040623.1 1 36 +
Chr2	stalkie_big_nohaplotig	CDS	157012611	157012757	.	+	0	Parent=FBgn0040623.1.mrna1;Target=FBgn0040623.1 37 183 +
Chr2	stalkie_big_nohaplotig	CDS	157012825	157012938	.	+	0	Parent=FBgn0040623.1.mrna1;Target=FBgn0040623.1 184 297 +
Chr2	gffcl	locus	157013328	157015221	.	-	.	ID=RLOC_00023124;geneIDs=FBgn0037648.1.path1;transcripts=FBgn0037648.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157013328	157015221	.	-	.	ID=FBgn0037648.1.mrna1;geneID=FBgn0037648.1.path1;Name=FBgn0037648.1;Dir=sensecoverage=100.0;identity=100.0;matches=1248;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023124
Chr2	stalkie_big_nohaplotig	exon	157013328	157013434	100	-	.	Parent=FBgn0037648.1.mrna1;Target=FBgn0037648.1 1142 1248 +
Chr2	stalkie_big_nohaplotig	exon	157013508	157013727	100	-	.	Parent=FBgn0037648.1.mrna1;Target=FBgn0037648.1 922 1141 +
Chr2	stalkie_big_nohaplotig	exon	157013785	157013973	100	-	.	Parent=FBgn0037648.1.mrna1;Target=FBgn0037648.1 733 921 +
Chr2	stalkie_big_nohaplotig	exon	157014029	157014462	100	-	.	Parent=FBgn0037648.1.mrna1;Target=FBgn0037648.1 299 732 +
Chr2	stalkie_big_nohaplotig	exon	157014588	157014869	100	-	.	Parent=FBgn0037648.1.mrna1;Target=FBgn0037648.1 17 298 +
Chr2	stalkie_big_nohaplotig	exon	157015206	157015221	100	-	.	Parent=FBgn0037648.1.mrna1;Target=FBgn0037648.1 1 16 +
Chr2	stalkie_big_nohaplotig	CDS	157013328	157013434	.	-	2	Parent=FBgn0037648.1.mrna1;Target=FBgn0037648.1 1142 1248 +
Chr2	stalkie_big_nohaplotig	CDS	157013508	157013727	.	-	0	Parent=FBgn0037648.1.mrna1;Target=FBgn0037648.1 922 1141 +
Chr2	stalkie_big_nohaplotig	CDS	157013785	157013973	.	-	0	Parent=FBgn0037648.1.mrna1;Target=FBgn0037648.1 733 921 +
Chr2	stalkie_big_nohaplotig	CDS	157014029	157014462	.	-	2	Parent=FBgn0037648.1.mrna1;Target=FBgn0037648.1 299 732 +
Chr2	stalkie_big_nohaplotig	CDS	157014588	157014869	.	-	2	Parent=FBgn0037648.1.mrna1;Target=FBgn0037648.1 17 298 +
Chr2	stalkie_big_nohaplotig	CDS	157015206	157015221	.	-	0	Parent=FBgn0037648.1.mrna1;Target=FBgn0037648.1 1 16 +
Chr2	gffcl	locus	157015655	157019294	.	+	.	ID=RLOC_00023125;geneIDs=FBgn0004049.1.path1;transcripts=FBgn0004049.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157015655	157019294	.	+	.	ID=FBgn0004049.1.mrna1;geneID=FBgn0004049.1.path1;Name=FBgn0004049.1;Dir=sensecoverage=100.0;identity=100.0;matches=2588;mismatches=0;indels=1;unknowns=0;locus=RLOC_00023125
Chr2	stalkie_big_nohaplotig	exon	157015655	157015807	100	+	.	Parent=FBgn0004049.1.mrna1;Target=FBgn0004049.1 1 153 +
Chr2	stalkie_big_nohaplotig	exon	157015878	157016025	100	+	.	Parent=FBgn0004049.1.mrna1;Target=FBgn0004049.1 154 301 +
Chr2	stalkie_big_nohaplotig	exon	157016083	157016259	100	+	.	Parent=FBgn0004049.1.mrna1;Target=FBgn0004049.1 302 478 +
Chr2	stalkie_big_nohaplotig	exon	157016332	157016540	100	+	.	Parent=FBgn0004049.1.mrna1;Target=FBgn0004049.1 479 687 +
Chr2	stalkie_big_nohaplotig	exon	157016594	157017095	100	+	.	Parent=FBgn0004049.1.mrna1;Target=FBgn0004049.1 688 1189 +
Chr2	stalkie_big_nohaplotig	exon	157017154	157017382	100	+	.	Parent=FBgn0004049.1.mrna1;Target=FBgn0004049.1 1190 1418 +
Chr2	stalkie_big_nohaplotig	exon	157017440	157017586	100	+	.	Parent=FBgn0004049.1.mrna1;Target=FBgn0004049.1 1419 1565 +
Chr2	stalkie_big_nohaplotig	exon	157017919	157018038	100	+	.	Parent=FBgn0004049.1.mrna1;Target=FBgn0004049.1 1566 1685 +
Chr2	stalkie_big_nohaplotig	exon	157018148	157018299	100	+	.	Parent=FBgn0004049.1.mrna1;Target=FBgn0004049.1 1686 1837 +
Chr2	stalkie_big_nohaplotig	exon	157018368	157018522	100	+	.	Parent=FBgn0004049.1.mrna1;Target=FBgn0004049.1 1838 1992 +
Chr2	stalkie_big_nohaplotig	exon	157018699	157019294	99	+	.	Parent=FBgn0004049.1.mrna1;Target=FBgn0004049.1 1993 2589 +
Chr2	stalkie_big_nohaplotig	CDS	157015655	157015807	.	+	0	Parent=FBgn0004049.1.mrna1;Target=FBgn0004049.1 1 153 +
Chr2	stalkie_big_nohaplotig	CDS	157015878	157016025	.	+	0	Parent=FBgn0004049.1.mrna1;Target=FBgn0004049.1 154 301 +
Chr2	stalkie_big_nohaplotig	CDS	157016083	157016259	.	+	2	Parent=FBgn0004049.1.mrna1;Target=FBgn0004049.1 302 478 +
Chr2	stalkie_big_nohaplotig	CDS	157016332	157016540	.	+	2	Parent=FBgn0004049.1.mrna1;Target=FBgn0004049.1 479 687 +
Chr2	stalkie_big_nohaplotig	CDS	157016594	157017095	.	+	0	Parent=FBgn0004049.1.mrna1;Target=FBgn0004049.1 688 1189 +
Chr2	stalkie_big_nohaplotig	CDS	157017154	157017382	.	+	2	Parent=FBgn0004049.1.mrna1;Target=FBgn0004049.1 1190 1418 +
Chr2	stalkie_big_nohaplotig	CDS	157017440	157017586	.	+	1	Parent=FBgn0004049.1.mrna1;Target=FBgn0004049.1 1419 1565 +
Chr2	stalkie_big_nohaplotig	CDS	157017919	157018038	.	+	1	Parent=FBgn0004049.1.mrna1;Target=FBgn0004049.1 1566 1685 +
Chr2	stalkie_big_nohaplotig	CDS	157018148	157018299	.	+	1	Parent=FBgn0004049.1.mrna1;Target=FBgn0004049.1 1686 1837 +
Chr2	stalkie_big_nohaplotig	CDS	157018368	157018522	.	+	2	Parent=FBgn0004049.1.mrna1;Target=FBgn0004049.1 1838 1992 +
Chr2	stalkie_big_nohaplotig	CDS	157018699	157019294	.	+	0	Parent=FBgn0004049.1.mrna1;Target=FBgn0004049.1 1993 2589 +
Chr2	gffcl	locus	157020859	157021456	.	+	.	ID=RLOC_00023126;geneIDs=comp148565_c0_seq1.path1;transcripts=comp148565_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157020859	157021456	.	+	.	ID=comp148565_c0_seq1.mrna1;geneID=comp148565_c0_seq1.path1;Name=comp148565_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.1;matches=598;mismatches=0;indels=18;unknowns=0;Target=comp148565_c0_seq1 616 1 .;CDS_Target=comp148565_c0_seq1 431 339 .;locus=RLOC_00023126
Chr2	stalkie_big_nohaplotig	exon	157020859	157021456	97	+	.	Parent=comp148565_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157021197	157021289	.	+	0	Parent=comp148565_c0_seq1.mrna1
Chr2	gffcl	locus	157021460	157022346	.	-	.	ID=RLOC_00023127;geneIDs=comp117484_c0_seq1.path1;transcripts=comp117484_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157021460	157022346	.	-	.	ID=comp117484_c0_seq1.mrna1;geneID=comp117484_c0_seq1.path1;Name=comp117484_c0_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=887;mismatches=0;indels=0;unknowns=0;Target=comp117484_c0_seq1 888 2 .;CDS_Target=comp117484_c0_seq1 287 201 .;locus=RLOC_00023127
Chr2	stalkie_big_nohaplotig	exon	157021460	157022346	100	-	.	Parent=comp117484_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157022061	157022147	.	-	0	Parent=comp117484_c0_seq1.mrna1
Chr2	gffcl	locus	157024766	157025805	.	.	.	ID=RLOC_00023128;geneIDs=comp145979_c0_seq1.path1,comp147313_c0_seq1.path1;transcripts=comp147313_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157024824	157025805	.	-	.	ID=comp147313_c0_seq1.mrna1;geneID=comp147313_c0_seq1.path1;Name=comp147313_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=972;mismatches=10;indels=1;unknowns=0;Target=comp147313_c0_seq1 983 1 .;CDS_Target=comp147313_c0_seq1 400 203 .;locus=RLOC_00023128
Chr2	stalkie_big_nohaplotig	exon	157024824	157025805	98	-	.	Parent=comp147313_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157025406	157025603	.	-	0	Parent=comp147313_c0_seq1.mrna1
Chr2	gffcl	locus	157029979	157030850	.	+	.	ID=RLOC_00023129;geneIDs=comp152931_c0_seq1.path1;transcripts=comp152931_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157029979	157030850	.	+	.	ID=comp152931_c0_seq1.mrna1;geneID=comp152931_c0_seq1.path1;Name=comp152931_c0_seq1;Dir=sensecoverage=99.9;identity=99.5;matches=814;mismatches=3;indels=1;unknowns=0;locus=RLOC_00023129
Chr2	stalkie_big_nohaplotig	exon	157029979	157030445	99	+	.	Parent=comp152931_c0_seq1.mrna1;Target=comp152931_c0_seq1 1 466 +
Chr2	stalkie_big_nohaplotig	exon	157030500	157030850	99	+	.	Parent=comp152931_c0_seq1.mrna1;Target=comp152931_c0_seq1 467 817 +
Chr2	stalkie_big_nohaplotig	CDS	157030373	157030445	.	+	0	Parent=comp152931_c0_seq1.mrna1;Target=comp152931_c0_seq1 394 466 +
Chr2	stalkie_big_nohaplotig	CDS	157030500	157030606	.	+	2	Parent=comp152931_c0_seq1.mrna1;Target=comp152931_c0_seq1 467 573 +
Chr2	gffcl	locus	157039515	157040887	.	-	.	ID=RLOC_00023130;geneIDs=comp161230_c1_seq1.path1;transcripts=comp161230_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157039515	157040887	.	-	.	ID=comp161230_c1_seq1.mrna1;geneID=comp161230_c1_seq1.path1;Name=comp161230_c1_seq1;Dir=indeterminatecoverage=100.0;identity=95.1;matches=1348;mismatches=25;indels=44;unknowns=0;Target=comp161230_c1_seq1 1417 1 .;CDS_Target=comp161230_c1_seq1 50 21 .;locus=RLOC_00023130
Chr2	stalkie_big_nohaplotig	exon	157039515	157040887	95	-	.	Parent=comp161230_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157040853	157040867	.	-	0	Parent=comp161230_c1_seq1.mrna1
Chr2	gffcl	locus	157044850	157045124	.	-	.	ID=RLOC_00023131;geneIDs=comp115471_c0_seq1.path1;transcripts=comp115471_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157044850	157045124	.	-	.	ID=comp115471_c0_seq1.mrna1;geneID=comp115471_c0_seq1.path1;Name=comp115471_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=275;mismatches=0;indels=0;unknowns=0;Target=comp115471_c0_seq1 275 1 .;CDS_Target=comp115471_c0_seq1 87 1 .;locus=RLOC_00023131
Chr2	stalkie_big_nohaplotig	exon	157044850	157045124	100	-	.	Parent=comp115471_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157045038	157045124	.	-	0	Parent=comp115471_c0_seq1.mrna1
Chr2	gffcl	locus	157045275	157056382	.	+	.	ID=RLOC_00023132;geneIDs=FBgn0041711.1.path1;transcripts=FBgn0041711.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157045275	157056382	.	+	.	ID=FBgn0041711.1.mrna1;geneID=FBgn0041711.1.path1;Name=FBgn0041711.1;Dir=sensecoverage=100.0;identity=100.0;matches=1665;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023132
Chr2	stalkie_big_nohaplotig	exon	157045275	157045340	100	+	.	Parent=FBgn0041711.1.mrna1;Target=FBgn0041711.1 1 66 +
Chr2	stalkie_big_nohaplotig	exon	157054374	157054709	100	+	.	Parent=FBgn0041711.1.mrna1;Target=FBgn0041711.1 67 402 +
Chr2	stalkie_big_nohaplotig	exon	157054775	157055114	100	+	.	Parent=FBgn0041711.1.mrna1;Target=FBgn0041711.1 403 742 +
Chr2	stalkie_big_nohaplotig	exon	157055391	157055577	100	+	.	Parent=FBgn0041711.1.mrna1;Target=FBgn0041711.1 743 929 +
Chr2	stalkie_big_nohaplotig	exon	157055647	157056382	100	+	.	Parent=FBgn0041711.1.mrna1;Target=FBgn0041711.1 930 1665 +
Chr2	stalkie_big_nohaplotig	CDS	157045275	157045340	.	+	0	Parent=FBgn0041711.1.mrna1;Target=FBgn0041711.1 1 66 +
Chr2	stalkie_big_nohaplotig	CDS	157054374	157054709	.	+	0	Parent=FBgn0041711.1.mrna1;Target=FBgn0041711.1 67 402 +
Chr2	stalkie_big_nohaplotig	CDS	157054775	157055114	.	+	0	Parent=FBgn0041711.1.mrna1;Target=FBgn0041711.1 403 742 +
Chr2	stalkie_big_nohaplotig	CDS	157055391	157055577	.	+	2	Parent=FBgn0041711.1.mrna1;Target=FBgn0041711.1 743 929 +
Chr2	stalkie_big_nohaplotig	CDS	157055647	157056382	.	+	1	Parent=FBgn0041711.1.mrna1;Target=FBgn0041711.1 930 1665 +
Chr2	gffcl	locus	157049191	157049253	.	+	.	ID=RLOC_00023133;geneIDs=comp153645_c0_seq1.path2;transcripts=comp153645_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	157049191	157049253	.	+	.	ID=comp153645_c0_seq1.mrna2;geneID=comp153645_c0_seq1.path2;Name=comp153645_c0_seq1;Dir=indeterminatecoverage=11.7;identity=100.0;matches=63;mismatches=0;indels=0;unknowns=0;Target=comp153645_c0_seq1 539 477 .;locus=RLOC_00023133
Chr2	stalkie_big_nohaplotig	exon	157049191	157049253	100	+	.	Parent=comp153645_c0_seq1.mrna2
Chr2	gffcl	locus	157065181	157066682	.	+	.	ID=RLOC_00023134;geneIDs=FBgn0041712.1.path1;transcripts=FBgn0041712.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157065181	157066682	.	+	.	ID=FBgn0041712.1.mrna1;geneID=FBgn0041712.1.path1;Name=FBgn0041712.1;Dir=sensecoverage=100.0;identity=100.0;matches=1305;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023134
Chr2	stalkie_big_nohaplotig	exon	157065181	157065421	100	+	.	Parent=FBgn0041712.1.mrna1;Target=FBgn0041712.1 1 241 +
Chr2	stalkie_big_nohaplotig	exon	157065484	157065665	100	+	.	Parent=FBgn0041712.1.mrna1;Target=FBgn0041712.1 242 423 +
Chr2	stalkie_big_nohaplotig	exon	157065747	157066496	100	+	.	Parent=FBgn0041712.1.mrna1;Target=FBgn0041712.1 424 1173 +
Chr2	stalkie_big_nohaplotig	exon	157066551	157066682	100	+	.	Parent=FBgn0041712.1.mrna1;Target=FBgn0041712.1 1174 1305 +
Chr2	stalkie_big_nohaplotig	CDS	157065181	157065421	.	+	0	Parent=FBgn0041712.1.mrna1;Target=FBgn0041712.1 1 241 +
Chr2	stalkie_big_nohaplotig	CDS	157065484	157065665	.	+	2	Parent=FBgn0041712.1.mrna1;Target=FBgn0041712.1 242 423 +
Chr2	stalkie_big_nohaplotig	CDS	157065747	157066496	.	+	0	Parent=FBgn0041712.1.mrna1;Target=FBgn0041712.1 424 1173 +
Chr2	stalkie_big_nohaplotig	CDS	157066551	157066682	.	+	0	Parent=FBgn0041712.1.mrna1;Target=FBgn0041712.1 1174 1305 +
Chr2	gffcl	locus	157067732	157071381	.	+	.	ID=RLOC_00023135;geneIDs=FBgn0038151.1.path1;transcripts=FBgn0038151.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157067732	157071381	.	+	.	ID=FBgn0038151.1.mrna1;geneID=FBgn0038151.1.path1;Name=FBgn0038151.1;Dir=sensecoverage=100.0;identity=100.0;matches=1362;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023135
Chr2	stalkie_big_nohaplotig	exon	157067732	157067790	100	+	.	Parent=FBgn0038151.1.mrna1;Target=FBgn0038151.1 1 59 +
Chr2	stalkie_big_nohaplotig	exon	157069962	157070212	100	+	.	Parent=FBgn0038151.1.mrna1;Target=FBgn0038151.1 60 310 +
Chr2	stalkie_big_nohaplotig	exon	157070272	157070459	100	+	.	Parent=FBgn0038151.1.mrna1;Target=FBgn0038151.1 311 498 +
Chr2	stalkie_big_nohaplotig	exon	157070518	157071381	100	+	.	Parent=FBgn0038151.1.mrna1;Target=FBgn0038151.1 499 1362 +
Chr2	stalkie_big_nohaplotig	CDS	157067732	157067790	.	+	0	Parent=FBgn0038151.1.mrna1;Target=FBgn0038151.1 1 59 +
Chr2	stalkie_big_nohaplotig	CDS	157069962	157070212	.	+	1	Parent=FBgn0038151.1.mrna1;Target=FBgn0038151.1 60 310 +
Chr2	stalkie_big_nohaplotig	CDS	157070272	157070459	.	+	2	Parent=FBgn0038151.1.mrna1;Target=FBgn0038151.1 311 498 +
Chr2	stalkie_big_nohaplotig	CDS	157070518	157071381	.	+	0	Parent=FBgn0038151.1.mrna1;Target=FBgn0038151.1 499 1362 +
Chr2	gffcl	locus	157071755	157072123	.	+	.	ID=RLOC_00023136;geneIDs=FBgn0053977.1.path1;transcripts=FBgn0053977.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157071755	157072123	.	+	.	ID=FBgn0053977.1.mrna1;geneID=FBgn0053977.1.path1;Name=FBgn0053977.1;Dir=sensecoverage=100.0;identity=100.0;matches=306;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023136
Chr2	stalkie_big_nohaplotig	exon	157071755	157071928	100	+	.	Parent=FBgn0053977.1.mrna1;Target=FBgn0053977.1 1 174 +
Chr2	stalkie_big_nohaplotig	exon	157071992	157072123	100	+	.	Parent=FBgn0053977.1.mrna1;Target=FBgn0053977.1 175 306 +
Chr2	stalkie_big_nohaplotig	CDS	157071755	157071928	.	+	0	Parent=FBgn0053977.1.mrna1;Target=FBgn0053977.1 1 174 +
Chr2	stalkie_big_nohaplotig	CDS	157071992	157072123	.	+	0	Parent=FBgn0053977.1.mrna1;Target=FBgn0053977.1 175 306 +
Chr2	gffcl	locus	157077547	157081232	.	+	.	ID=RLOC_00023137;geneIDs=FBgn0038149.1.path1;transcripts=FBgn0038149.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157077547	157081232	.	+	.	ID=FBgn0038149.1.mrna1;geneID=FBgn0038149.1.path1;Name=FBgn0038149.1;Dir=sensecoverage=100.0;identity=99.7;matches=757;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023137
Chr2	stalkie_big_nohaplotig	exon	157077547	157077639	100	+	.	Parent=FBgn0038149.1.mrna1;Target=FBgn0038149.1 1 93 +
Chr2	stalkie_big_nohaplotig	exon	157080398	157080532	100	+	.	Parent=FBgn0038149.1.mrna1;Target=FBgn0038149.1 94 228 +
Chr2	stalkie_big_nohaplotig	exon	157080646	157081005	99	+	.	Parent=FBgn0038149.1.mrna1;Target=FBgn0038149.1 229 588 +
Chr2	stalkie_big_nohaplotig	exon	157081062	157081232	100	+	.	Parent=FBgn0038149.1.mrna1;Target=FBgn0038149.1 589 759 +
Chr2	stalkie_big_nohaplotig	CDS	157077547	157077639	.	+	0	Parent=FBgn0038149.1.mrna1;Target=FBgn0038149.1 1 93 +
Chr2	stalkie_big_nohaplotig	CDS	157080398	157080532	.	+	0	Parent=FBgn0038149.1.mrna1;Target=FBgn0038149.1 94 228 +
Chr2	stalkie_big_nohaplotig	CDS	157080646	157081005	.	+	0	Parent=FBgn0038149.1.mrna1;Target=FBgn0038149.1 229 588 +
Chr2	stalkie_big_nohaplotig	CDS	157081062	157081232	.	+	0	Parent=FBgn0038149.1.mrna1;Target=FBgn0038149.1 589 759 +
Chr2	gffcl	locus	157090232	157099252	.	+	.	ID=RLOC_00023138;geneIDs=comp151489_c0_seq1.path1;transcripts=comp151489_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157090232	157099252	.	+	.	ID=comp151489_c0_seq1.mrna1;geneID=comp151489_c0_seq1.path1;Name=comp151489_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=1220;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023138
Chr2	stalkie_big_nohaplotig	exon	157090232	157090661	100	+	.	Parent=comp151489_c0_seq1.mrna1;Target=comp151489_c0_seq1 1 430 +
Chr2	stalkie_big_nohaplotig	exon	157095103	157095179	100	+	.	Parent=comp151489_c0_seq1.mrna1;Target=comp151489_c0_seq1 431 507 +
Chr2	stalkie_big_nohaplotig	exon	157098468	157098730	100	+	.	Parent=comp151489_c0_seq1.mrna1;Target=comp151489_c0_seq1 508 770 +
Chr2	stalkie_big_nohaplotig	exon	157098802	157099252	99	+	.	Parent=comp151489_c0_seq1.mrna1;Target=comp151489_c0_seq1 771 1221 +
Chr2	stalkie_big_nohaplotig	CDS	157095107	157095179	.	+	0	Parent=comp151489_c0_seq1.mrna1;Target=comp151489_c0_seq1 435 507 +
Chr2	stalkie_big_nohaplotig	CDS	157098468	157098730	.	+	2	Parent=comp151489_c0_seq1.mrna1;Target=comp151489_c0_seq1 508 770 +
Chr2	stalkie_big_nohaplotig	CDS	157098802	157098894	.	+	0	Parent=comp151489_c0_seq1.mrna1;Target=comp151489_c0_seq1 771 863 +
Chr2	gffcl	locus	157100933	157103970	.	+	.	ID=RLOC_00023139;geneIDs=FBgn0038146.1.path1;transcripts=FBgn0038146.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157100933	157103970	.	+	.	ID=FBgn0038146.1.mrna1;geneID=FBgn0038146.1.path1;Name=FBgn0038146.1;Dir=sensecoverage=100.0;identity=99.6;matches=2742;mismatches=12;indels=0;unknowns=0;locus=RLOC_00023139
Chr2	stalkie_big_nohaplotig	exon	157100933	157101763	99	+	.	Parent=FBgn0038146.1.mrna1;Target=FBgn0038146.1 1 831 +
Chr2	stalkie_big_nohaplotig	exon	157101863	157102184	100	+	.	Parent=FBgn0038146.1.mrna1;Target=FBgn0038146.1 832 1153 +
Chr2	stalkie_big_nohaplotig	exon	157102247	157102501	100	+	.	Parent=FBgn0038146.1.mrna1;Target=FBgn0038146.1 1154 1408 +
Chr2	stalkie_big_nohaplotig	exon	157102563	157102739	99	+	.	Parent=FBgn0038146.1.mrna1;Target=FBgn0038146.1 1409 1585 +
Chr2	stalkie_big_nohaplotig	exon	157102802	157103970	99	+	.	Parent=FBgn0038146.1.mrna1;Target=FBgn0038146.1 1586 2754 +
Chr2	stalkie_big_nohaplotig	CDS	157100933	157101763	.	+	0	Parent=FBgn0038146.1.mrna1;Target=FBgn0038146.1 1 831 +
Chr2	stalkie_big_nohaplotig	CDS	157101863	157102184	.	+	0	Parent=FBgn0038146.1.mrna1;Target=FBgn0038146.1 832 1153 +
Chr2	stalkie_big_nohaplotig	CDS	157102247	157102501	.	+	2	Parent=FBgn0038146.1.mrna1;Target=FBgn0038146.1 1154 1408 +
Chr2	stalkie_big_nohaplotig	CDS	157102563	157102739	.	+	2	Parent=FBgn0038146.1.mrna1;Target=FBgn0038146.1 1409 1585 +
Chr2	stalkie_big_nohaplotig	CDS	157102802	157103970	.	+	2	Parent=FBgn0038146.1.mrna1;Target=FBgn0038146.1 1586 2754 +
Chr2	gffcl	locus	157104898	157106163	.	-	.	ID=RLOC_00023140;geneIDs=FBgn0038145.1.path1;transcripts=FBgn0038145.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157104898	157106163	.	-	.	ID=FBgn0038145.1.mrna1;geneID=FBgn0038145.1.path1;Name=FBgn0038145.1;Dir=sensecoverage=100.0;identity=99.8;matches=1204;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023140
Chr2	stalkie_big_nohaplotig	exon	157104898	157104999	100	-	.	Parent=FBgn0038145.1.mrna1;Target=FBgn0038145.1 1105 1206 +
Chr2	stalkie_big_nohaplotig	exon	157105060	157106163	99	-	.	Parent=FBgn0038145.1.mrna1;Target=FBgn0038145.1 1 1104 +
Chr2	stalkie_big_nohaplotig	CDS	157104898	157104999	.	-	0	Parent=FBgn0038145.1.mrna1;Target=FBgn0038145.1 1105 1206 +
Chr2	stalkie_big_nohaplotig	CDS	157105060	157106163	.	-	0	Parent=FBgn0038145.1.mrna1;Target=FBgn0038145.1 1 1104 +
Chr2	gffcl	locus	157106601	157106931	.	-	.	ID=RLOC_00023141;geneIDs=comp147342_c0_seq1.path1;transcripts=comp147342_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157106601	157106931	.	-	.	ID=comp147342_c0_seq1.mrna1;geneID=comp147342_c0_seq1.path1;Name=comp147342_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=328;mismatches=3;indels=0;unknowns=0;Target=comp147342_c0_seq1 331 1 .;CDS_Target=comp147342_c0_seq1 138 106 .;locus=RLOC_00023141
Chr2	stalkie_big_nohaplotig	exon	157106601	157106931	99	-	.	Parent=comp147342_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157106794	157106826	.	-	0	Parent=comp147342_c0_seq1.mrna1
Chr2	gffcl	locus	157108681	157109007	.	+	.	ID=RLOC_00023142;geneIDs=FBgn0044511.1.path1;transcripts=FBgn0044511.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157108681	157109007	.	+	.	ID=FBgn0044511.1.mrna1;geneID=FBgn0044511.1.path1;Name=FBgn0044511.1;Dir=sensecoverage=99.3;identity=98.9;matches=265;mismatches=3;indels=0;unknowns=0;locus=RLOC_00023142
Chr2	stalkie_big_nohaplotig	exon	157108681	157108834	98	+	.	Parent=FBgn0044511.1.mrna1;Target=FBgn0044511.1 3 156 +
Chr2	stalkie_big_nohaplotig	exon	157108894	157109007	99	+	.	Parent=FBgn0044511.1.mrna1;Target=FBgn0044511.1 157 270 +
Chr2	stalkie_big_nohaplotig	CDS	157108682	157108834	.	+	0	Parent=FBgn0044511.1.mrna1;Target=FBgn0044511.1 4 156 +
Chr2	stalkie_big_nohaplotig	CDS	157108894	157109007	.	+	0	Parent=FBgn0044511.1.mrna1;Target=FBgn0044511.1 157 270 +
Chr2	gffcl	locus	157109426	157110553	.	+	.	ID=RLOC_00023143;geneIDs=FBgn0038590.1.path1;transcripts=FBgn0038590.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157109426	157110553	.	+	.	ID=FBgn0038590.1.mrna1;geneID=FBgn0038590.1.path1;Name=FBgn0038590.1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1125;mismatches=3;indels=0;unknowns=0;Target=FBgn0038590.1 1128 1 .;locus=RLOC_00023143
Chr2	stalkie_big_nohaplotig	exon	157109426	157110553	99	+	.	Parent=FBgn0038590.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157109426	157110553	.	+	0	Parent=FBgn0038590.1.mrna1
Chr2	gffcl	locus	157112817	157113860	.	+	.	ID=RLOC_00023144;geneIDs=ORF2405.path1;transcripts=ORF2405.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157112817	157113860	.	+	.	ID=ORF2405.mrna1;geneID=ORF2405.path1;Name=ORF2405;Dir=sensecoverage=100.0;identity=99.9;matches=863;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023144
Chr2	stalkie_big_nohaplotig	exon	157112817	157112832	100	+	.	Parent=ORF2405.mrna1;Target=ORF2405 1 16 +
Chr2	stalkie_big_nohaplotig	exon	157112894	157112991	98	+	.	Parent=ORF2405.mrna1;Target=ORF2405 17 114 +
Chr2	stalkie_big_nohaplotig	exon	157113050	157113227	100	+	.	Parent=ORF2405.mrna1;Target=ORF2405 115 292 +
Chr2	stalkie_big_nohaplotig	exon	157113289	157113860	100	+	.	Parent=ORF2405.mrna1;Target=ORF2405 293 864 +
Chr2	stalkie_big_nohaplotig	CDS	157112817	157112832	.	+	0	Parent=ORF2405.mrna1;Target=ORF2405 1 16 +
Chr2	stalkie_big_nohaplotig	CDS	157112894	157112991	.	+	2	Parent=ORF2405.mrna1;Target=ORF2405 17 114 +
Chr2	stalkie_big_nohaplotig	CDS	157113050	157113227	.	+	0	Parent=ORF2405.mrna1;Target=ORF2405 115 292 +
Chr2	stalkie_big_nohaplotig	CDS	157113289	157113860	.	+	2	Parent=ORF2405.mrna1;Target=ORF2405 293 864 +
Chr2	gffcl	locus	157116764	158292309	.	.	.	ID=RLOC_00023145;geneIDs=FBgn0038223.1.path2,comp97615_c0_seq1.path1,comp160118_c0_seq1.path1;transcripts=comp160118_c0_seq1.mrna1,FBgn0038223.1.mrna2,comp97615_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157116764	158292309	.	-	.	ID=comp160118_c0_seq1.mrna1;geneID=comp160118_c0_seq1.path1;Name=comp160118_c0_seq1;Dir=antisensecoverage=95.1;identity=98.2;matches=3302;mismatches=28;indels=31;unknowns=0;locus=RLOC_00023145
Chr2	stalkie_big_nohaplotig	exon	157116764	157118449	100	-	.	Parent=comp160118_c0_seq1.mrna1;Target=comp160118_c0_seq1 1 1686 -
Chr2	stalkie_big_nohaplotig	exon	157122443	157122653	100	-	.	Parent=comp160118_c0_seq1.mrna1;Target=comp160118_c0_seq1 1687 1897 -
Chr2	stalkie_big_nohaplotig	exon	157122723	157123963	99	-	.	Parent=comp160118_c0_seq1.mrna1;Target=comp160118_c0_seq1 1898 3138 -
Chr2	stalkie_big_nohaplotig	exon	157124026	157124123	100	-	.	Parent=comp160118_c0_seq1.mrna1;Target=comp160118_c0_seq1 3139 3236 -
Chr2	stalkie_big_nohaplotig	exon	158262258	158262312	54	-	.	Parent=comp160118_c0_seq1.mrna1;Target=comp160118_c0_seq1 3411 3481 -
Chr2	stalkie_big_nohaplotig	exon	158263924	158263926	100	-	.	Parent=comp160118_c0_seq1.mrna1;Target=comp160118_c0_seq1 3482 3484 -
Chr2	stalkie_big_nohaplotig	exon	158270526	158270530	100	-	.	Parent=comp160118_c0_seq1.mrna1;Target=comp160118_c0_seq1 3485 3489 -
Chr2	stalkie_big_nohaplotig	exon	158278565	158278568	100	-	.	Parent=comp160118_c0_seq1.mrna1;Target=comp160118_c0_seq1 3490 3493 -
Chr2	stalkie_big_nohaplotig	exon	158279498	158279506	100	-	.	Parent=comp160118_c0_seq1.mrna1;Target=comp160118_c0_seq1 3494 3502 -
Chr2	stalkie_big_nohaplotig	exon	158281032	158281055	37	-	.	Parent=comp160118_c0_seq1.mrna1;Target=comp160118_c0_seq1 3503 3511 -
Chr2	stalkie_big_nohaplotig	exon	158286152	158286155	100	-	.	Parent=comp160118_c0_seq1.mrna1;Target=comp160118_c0_seq1 3512 3515 -
Chr2	stalkie_big_nohaplotig	exon	158292306	158292309	100	-	.	Parent=comp160118_c0_seq1.mrna1;Target=comp160118_c0_seq1 3516 3519 -
Chr2	stalkie_big_nohaplotig	CDS	157116765	157118449	.	-	2	Parent=comp160118_c0_seq1.mrna1;Target=comp160118_c0_seq1 2 1686 .
Chr2	stalkie_big_nohaplotig	CDS	157122443	157122653	.	-	0	Parent=comp160118_c0_seq1.mrna1;Target=comp160118_c0_seq1 1687 1897 .
Chr2	stalkie_big_nohaplotig	CDS	157122723	157123961	.	-	0	Parent=comp160118_c0_seq1.mrna1;Target=comp160118_c0_seq1 1898 3136 .
Chr2	stalkie_big_nohaplotig	mRNA	157116765	157124205	.	-	.	ID=FBgn0038223.1.mrna2;geneID=FBgn0038223.1.path2;Name=FBgn0038223.1;Dir=sensecoverage=97.1;identity=99.6;matches=3223;mismatches=12;indels=0;unknowns=82;locus=RLOC_00023145
Chr2	stalkie_big_nohaplotig	exon	157116765	157118449	100	-	.	Parent=FBgn0038223.1.mrna2;Target=FBgn0038223.1 1733 3417 +
Chr2	stalkie_big_nohaplotig	exon	157122443	157122653	100	-	.	Parent=FBgn0038223.1.mrna2;Target=FBgn0038223.1 1522 1732 +
Chr2	stalkie_big_nohaplotig	exon	157122723	157123963	99	-	.	Parent=FBgn0038223.1.mrna2;Target=FBgn0038223.1 281 1521 +
Chr2	stalkie_big_nohaplotig	exon	157124026	157124205	100	-	.	Parent=FBgn0038223.1.mrna2;Target=FBgn0038223.1 101 280 +
Chr2	stalkie_big_nohaplotig	CDS	157116765	157118449	.	-	1	Parent=FBgn0038223.1.mrna2;Target=FBgn0038223.1 1733 3417 +
Chr2	stalkie_big_nohaplotig	CDS	157122443	157122653	.	-	2	Parent=FBgn0038223.1.mrna2;Target=FBgn0038223.1 1522 1732 +
Chr2	stalkie_big_nohaplotig	CDS	157122723	157123963	.	-	1	Parent=FBgn0038223.1.mrna2;Target=FBgn0038223.1 281 1521 +
Chr2	stalkie_big_nohaplotig	CDS	157124026	157124205	.	-	1	Parent=FBgn0038223.1.mrna2;Target=FBgn0038223.1 101 280 +
Chr2	stalkie_big_nohaplotig	mRNA	158281006	158281503	.	+	.	ID=comp97615_c0_seq1.mrna1;geneID=comp97615_c0_seq1.path1;Name=comp97615_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=498;mismatches=0;indels=0;unknowns=0;Target=comp97615_c0_seq1 498 1 .;CDS_Target=comp97615_c0_seq1 266 183 .;locus=RLOC_00023145
Chr2	stalkie_big_nohaplotig	exon	158281006	158281503	100	+	.	Parent=comp97615_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158281188	158281271	.	+	0	Parent=comp97615_c0_seq1.mrna1
Chr2	gffcl	locus	157134037	157134330	.	-	.	ID=RLOC_00023146;geneIDs=FBgn0039687.1.path1;transcripts=FBgn0039687.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157134037	157134330	.	-	.	ID=FBgn0039687.1.mrna1;geneID=FBgn0039687.1.path1;Name=FBgn0039687.1;Dir=indeterminatecoverage=45.4;identity=99.7;matches=293;mismatches=1;indels=0;unknowns=0;Target=FBgn0039687.1 294 1 .;locus=RLOC_00023146
Chr2	stalkie_big_nohaplotig	exon	157134037	157134330	99	-	.	Parent=FBgn0039687.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157134037	157134330	.	-	0	Parent=FBgn0039687.1.mrna1
Chr2	gffcl	locus	157135023	157135629	.	+	.	ID=RLOC_00023147;geneIDs=comp150019_c0_seq1.path1;transcripts=comp150019_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157135023	157135629	.	+	.	ID=comp150019_c0_seq1.mrna1;geneID=comp150019_c0_seq1.path1;Name=comp150019_c0_seq1;Dir=antisensecoverage=95.0;identity=99.6;matches=535;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023147
Chr2	stalkie_big_nohaplotig	exon	157135023	157135254	100	+	.	Parent=comp150019_c0_seq1.mrna1;Target=comp150019_c0_seq1 307 538 -
Chr2	stalkie_big_nohaplotig	exon	157135325	157135629	99	+	.	Parent=comp150019_c0_seq1.mrna1;Target=comp150019_c0_seq1 2 306 -
Chr2	stalkie_big_nohaplotig	CDS	157135251	157135254	.	+	0	Parent=comp150019_c0_seq1.mrna1;Target=comp150019_c0_seq1 307 310 .
Chr2	stalkie_big_nohaplotig	CDS	157135325	157135410	.	+	2	Parent=comp150019_c0_seq1.mrna1;Target=comp150019_c0_seq1 221 306 .
Chr2	gffcl	locus	157136563	157137744	.	-	.	ID=RLOC_00023148;geneIDs=FBgn0036848.1.path1;transcripts=FBgn0036848.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157136563	157137744	.	-	.	ID=FBgn0036848.1.mrna1;geneID=FBgn0036848.1.path1;Name=FBgn0036848.1;Dir=sensecoverage=100.0;identity=99.9;matches=968;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023148
Chr2	stalkie_big_nohaplotig	exon	157136563	157136834	100	-	.	Parent=FBgn0036848.1.mrna1;Target=FBgn0036848.1 698 969 +
Chr2	stalkie_big_nohaplotig	exon	157136885	157136949	100	-	.	Parent=FBgn0036848.1.mrna1;Target=FBgn0036848.1 633 697 +
Chr2	stalkie_big_nohaplotig	exon	157137006	157137241	100	-	.	Parent=FBgn0036848.1.mrna1;Target=FBgn0036848.1 397 632 +
Chr2	stalkie_big_nohaplotig	exon	157137293	157137495	100	-	.	Parent=FBgn0036848.1.mrna1;Target=FBgn0036848.1 194 396 +
Chr2	stalkie_big_nohaplotig	exon	157137552	157137744	99	-	.	Parent=FBgn0036848.1.mrna1;Target=FBgn0036848.1 1 193 +
Chr2	stalkie_big_nohaplotig	CDS	157136563	157136834	.	-	2	Parent=FBgn0036848.1.mrna1;Target=FBgn0036848.1 698 969 +
Chr2	stalkie_big_nohaplotig	CDS	157136885	157136949	.	-	1	Parent=FBgn0036848.1.mrna1;Target=FBgn0036848.1 633 697 +
Chr2	stalkie_big_nohaplotig	CDS	157137006	157137241	.	-	0	Parent=FBgn0036848.1.mrna1;Target=FBgn0036848.1 397 632 +
Chr2	stalkie_big_nohaplotig	CDS	157137293	157137495	.	-	2	Parent=FBgn0036848.1.mrna1;Target=FBgn0036848.1 194 396 +
Chr2	stalkie_big_nohaplotig	CDS	157137552	157137744	.	-	0	Parent=FBgn0036848.1.mrna1;Target=FBgn0036848.1 1 193 +
Chr2	gffcl	locus	157141135	157146945	.	+	.	ID=RLOC_00023149;geneIDs=FBgn0027620.1.path1;transcripts=FBgn0027620.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157141135	157146945	.	+	.	ID=FBgn0027620.1.mrna1;geneID=FBgn0027620.1.path1;Name=FBgn0027620.1;Dir=sensecoverage=100.0;identity=99.6;matches=4482;mismatches=18;indels=0;unknowns=0;locus=RLOC_00023149
Chr2	stalkie_big_nohaplotig	exon	157141135	157141280	100	+	.	Parent=FBgn0027620.1.mrna1;Target=FBgn0027620.1 1 146 +
Chr2	stalkie_big_nohaplotig	exon	157142291	157145971	99	+	.	Parent=FBgn0027620.1.mrna1;Target=FBgn0027620.1 147 3827 +
Chr2	stalkie_big_nohaplotig	exon	157146033	157146202	100	+	.	Parent=FBgn0027620.1.mrna1;Target=FBgn0027620.1 3828 3997 +
Chr2	stalkie_big_nohaplotig	exon	157146381	157146801	99	+	.	Parent=FBgn0027620.1.mrna1;Target=FBgn0027620.1 3998 4418 +
Chr2	stalkie_big_nohaplotig	exon	157146864	157146945	100	+	.	Parent=FBgn0027620.1.mrna1;Target=FBgn0027620.1 4419 4500 +
Chr2	stalkie_big_nohaplotig	CDS	157141135	157141280	.	+	0	Parent=FBgn0027620.1.mrna1;Target=FBgn0027620.1 1 146 +
Chr2	stalkie_big_nohaplotig	CDS	157142291	157145971	.	+	1	Parent=FBgn0027620.1.mrna1;Target=FBgn0027620.1 147 3827 +
Chr2	stalkie_big_nohaplotig	CDS	157146033	157146202	.	+	1	Parent=FBgn0027620.1.mrna1;Target=FBgn0027620.1 3828 3997 +
Chr2	stalkie_big_nohaplotig	CDS	157146381	157146801	.	+	2	Parent=FBgn0027620.1.mrna1;Target=FBgn0027620.1 3998 4418 +
Chr2	stalkie_big_nohaplotig	CDS	157146864	157146945	.	+	1	Parent=FBgn0027620.1.mrna1;Target=FBgn0027620.1 4419 4500 +
Chr2	gffcl	locus	157147984	157151196	.	-	.	ID=RLOC_00023150;geneIDs=FBgn0250755.1.path1,comp156416_c0_seq1.path1;transcripts=comp156416_c0_seq1.mrna1,FBgn0250755.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157147984	157151196	.	-	.	ID=comp156416_c0_seq1.mrna1;geneID=comp156416_c0_seq1.path1;Name=comp156416_c0_seq1;Dir=sensecoverage=100.0;identity=98.8;matches=2808;mismatches=14;indels=19;unknowns=0;locus=RLOC_00023150
Chr2	stalkie_big_nohaplotig	exon	157147984	157148502	99	-	.	Parent=comp156416_c0_seq1.mrna1;Target=comp156416_c0_seq1 2314 2833 +
Chr2	stalkie_big_nohaplotig	exon	157148555	157148650	98	-	.	Parent=comp156416_c0_seq1.mrna1;Target=comp156416_c0_seq1 2218 2313 +
Chr2	stalkie_big_nohaplotig	exon	157148729	157149669	97	-	.	Parent=comp156416_c0_seq1.mrna1;Target=comp156416_c0_seq1 1277 2217 +
Chr2	stalkie_big_nohaplotig	exon	157149734	157149997	99	-	.	Parent=comp156416_c0_seq1.mrna1;Target=comp156416_c0_seq1 1013 1276 +
Chr2	stalkie_big_nohaplotig	exon	157150058	157150238	99	-	.	Parent=comp156416_c0_seq1.mrna1;Target=comp156416_c0_seq1 832 1012 +
Chr2	stalkie_big_nohaplotig	exon	157150302	157150621	99	-	.	Parent=comp156416_c0_seq1.mrna1;Target=comp156416_c0_seq1 512 831 +
Chr2	stalkie_big_nohaplotig	exon	157150688	157151196	99	-	.	Parent=comp156416_c0_seq1.mrna1;Target=comp156416_c0_seq1 1 511 +
Chr2	stalkie_big_nohaplotig	CDS	157149387	157149669	.	-	1	Parent=comp156416_c0_seq1.mrna1;Target=comp156416_c0_seq1 1277 1559 +
Chr2	stalkie_big_nohaplotig	CDS	157149734	157149997	.	-	1	Parent=comp156416_c0_seq1.mrna1;Target=comp156416_c0_seq1 1013 1276 +
Chr2	stalkie_big_nohaplotig	CDS	157150058	157150238	.	-	2	Parent=comp156416_c0_seq1.mrna1;Target=comp156416_c0_seq1 832 1012 +
Chr2	stalkie_big_nohaplotig	CDS	157150302	157150521	.	-	0	Parent=comp156416_c0_seq1.mrna1;Target=comp156416_c0_seq1 612 831 +
Chr2	stalkie_big_nohaplotig	mRNA	157148454	157150537	.	-	.	ID=FBgn0250755.1.mrna1;geneID=FBgn0250755.1.path1;Name=FBgn0250755.1;Dir=sensecoverage=99.9;identity=99.6;matches=1639;mismatches=5;indels=1;unknowns=0;locus=RLOC_00023150
Chr2	stalkie_big_nohaplotig	exon	157148454	157148502	98	-	.	Parent=FBgn0250755.1.mrna1;Target=FBgn0250755.1 1598 1647 +
Chr2	stalkie_big_nohaplotig	exon	157148555	157148650	98	-	.	Parent=FBgn0250755.1.mrna1;Target=FBgn0250755.1 1502 1597 +
Chr2	stalkie_big_nohaplotig	exon	157148729	157149140	99	-	.	Parent=FBgn0250755.1.mrna1;Target=FBgn0250755.1 1090 1501 +
Chr2	stalkie_big_nohaplotig	exon	157149215	157149345	100	-	.	Parent=FBgn0250755.1.mrna1;Target=FBgn0250755.1 959 1089 +
Chr2	stalkie_big_nohaplotig	exon	157149395	157149669	99	-	.	Parent=FBgn0250755.1.mrna1;Target=FBgn0250755.1 684 958 +
Chr2	stalkie_big_nohaplotig	exon	157149734	157149997	99	-	.	Parent=FBgn0250755.1.mrna1;Target=FBgn0250755.1 420 683 +
Chr2	stalkie_big_nohaplotig	exon	157150058	157150238	99	-	.	Parent=FBgn0250755.1.mrna1;Target=FBgn0250755.1 239 419 +
Chr2	stalkie_big_nohaplotig	exon	157150302	157150537	100	-	.	Parent=FBgn0250755.1.mrna1;Target=FBgn0250755.1 3 238 +
Chr2	stalkie_big_nohaplotig	CDS	157148454	157148502	.	-	2	Parent=FBgn0250755.1.mrna1;Target=FBgn0250755.1 1598 1647 +
Chr2	stalkie_big_nohaplotig	CDS	157148555	157148650	.	-	2	Parent=FBgn0250755.1.mrna1;Target=FBgn0250755.1 1502 1597 +
Chr2	stalkie_big_nohaplotig	CDS	157148729	157149140	.	-	0	Parent=FBgn0250755.1.mrna1;Target=FBgn0250755.1 1090 1501 +
Chr2	stalkie_big_nohaplotig	CDS	157149215	157149345	.	-	2	Parent=FBgn0250755.1.mrna1;Target=FBgn0250755.1 959 1089 +
Chr2	stalkie_big_nohaplotig	CDS	157149395	157149669	.	-	1	Parent=FBgn0250755.1.mrna1;Target=FBgn0250755.1 684 958 +
Chr2	stalkie_big_nohaplotig	CDS	157149734	157149997	.	-	1	Parent=FBgn0250755.1.mrna1;Target=FBgn0250755.1 420 683 +
Chr2	stalkie_big_nohaplotig	CDS	157150058	157150238	.	-	2	Parent=FBgn0250755.1.mrna1;Target=FBgn0250755.1 239 419 +
Chr2	stalkie_big_nohaplotig	CDS	157150302	157150536	.	-	0	Parent=FBgn0250755.1.mrna1;Target=FBgn0250755.1 4 238 +
Chr2	gffcl	locus	157153370	157154188	.	+	.	ID=RLOC_00023151;geneIDs=comp147466_c1_seq1.path1;transcripts=comp147466_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157153370	157154188	.	+	.	ID=comp147466_c1_seq1.mrna1;geneID=comp147466_c1_seq1.path1;Name=comp147466_c1_seq1;Dir=indeterminatecoverage=74.0;identity=97.9;matches=808;mismatches=11;indels=6;unknowns=0;Target=comp147466_c1_seq1 1115 291 .;CDS_Target=comp147466_c1_seq1 728 615 .;locus=RLOC_00023151
Chr2	stalkie_big_nohaplotig	exon	157153370	157154188	97	+	.	Parent=comp147466_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157153693	157153806	.	+	0	Parent=comp147466_c1_seq1.mrna1
Chr2	gffcl	locus	157155854	157157309	.	-	.	ID=RLOC_00023152;geneIDs=FBgn0024891.1.path1;transcripts=FBgn0024891.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157155854	157157309	.	-	.	ID=FBgn0024891.1.mrna1;geneID=FBgn0024891.1.path1;Name=FBgn0024891.1;Dir=sensecoverage=100.0;identity=99.6;matches=1159;mismatches=5;indels=0;unknowns=0;locus=RLOC_00023152
Chr2	stalkie_big_nohaplotig	exon	157155854	157156048	99	-	.	Parent=FBgn0024891.1.mrna1;Target=FBgn0024891.1 970 1164 +
Chr2	stalkie_big_nohaplotig	exon	157156103	157156219	100	-	.	Parent=FBgn0024891.1.mrna1;Target=FBgn0024891.1 853 969 +
Chr2	stalkie_big_nohaplotig	exon	157156276	157156597	99	-	.	Parent=FBgn0024891.1.mrna1;Target=FBgn0024891.1 531 852 +
Chr2	stalkie_big_nohaplotig	exon	157156661	157156762	100	-	.	Parent=FBgn0024891.1.mrna1;Target=FBgn0024891.1 429 530 +
Chr2	stalkie_big_nohaplotig	exon	157156823	157157204	99	-	.	Parent=FBgn0024891.1.mrna1;Target=FBgn0024891.1 47 428 +
Chr2	stalkie_big_nohaplotig	exon	157157264	157157309	100	-	.	Parent=FBgn0024891.1.mrna1;Target=FBgn0024891.1 1 46 +
Chr2	stalkie_big_nohaplotig	CDS	157155854	157156048	.	-	0	Parent=FBgn0024891.1.mrna1;Target=FBgn0024891.1 970 1164 +
Chr2	stalkie_big_nohaplotig	CDS	157156103	157156219	.	-	0	Parent=FBgn0024891.1.mrna1;Target=FBgn0024891.1 853 969 +
Chr2	stalkie_big_nohaplotig	CDS	157156276	157156597	.	-	1	Parent=FBgn0024891.1.mrna1;Target=FBgn0024891.1 531 852 +
Chr2	stalkie_big_nohaplotig	CDS	157156661	157156762	.	-	1	Parent=FBgn0024891.1.mrna1;Target=FBgn0024891.1 429 530 +
Chr2	stalkie_big_nohaplotig	CDS	157156823	157157204	.	-	2	Parent=FBgn0024891.1.mrna1;Target=FBgn0024891.1 47 428 +
Chr2	stalkie_big_nohaplotig	CDS	157157264	157157309	.	-	0	Parent=FBgn0024891.1.mrna1;Target=FBgn0024891.1 1 46 +
Chr2	gffcl	locus	157161699	157162976	.	+	.	ID=RLOC_00023153;geneIDs=FBgn0086365.1.path1;transcripts=FBgn0086365.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157161699	157162976	.	+	.	ID=FBgn0086365.1.mrna1;geneID=FBgn0086365.1.path1;Name=FBgn0086365.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1276;mismatches=2;indels=0;unknowns=0;Target=FBgn0086365.1 1278 1 .;locus=RLOC_00023153
Chr2	stalkie_big_nohaplotig	exon	157161699	157162976	99	+	.	Parent=FBgn0086365.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157161699	157162976	.	+	0	Parent=FBgn0086365.1.mrna1
Chr2	gffcl	locus	157167333	157169030	.	+	.	ID=RLOC_00023154;geneIDs=FBgn0019952.1.path1;transcripts=FBgn0019952.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157167333	157169030	.	+	.	ID=FBgn0019952.1.mrna1;geneID=FBgn0019952.1.path1;Name=FBgn0019952.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1698;mismatches=0;indels=0;unknowns=0;Target=FBgn0019952.1 1698 1 .;locus=RLOC_00023154
Chr2	stalkie_big_nohaplotig	exon	157167333	157169030	100	+	.	Parent=FBgn0019952.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157167333	157169030	.	+	0	Parent=FBgn0019952.1.mrna1
Chr2	gffcl	locus	157188780	157191256	.	-	.	ID=RLOC_00023156;geneIDs=FBgn0085319.1.path1;transcripts=FBgn0085319.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157188780	157191256	.	-	.	ID=FBgn0085319.1.mrna1;geneID=FBgn0085319.1.path1;Name=FBgn0085319.1;Dir=sensecoverage=100.0;identity=99.4;matches=847;mismatches=5;indels=0;unknowns=0;locus=RLOC_00023156
Chr2	stalkie_big_nohaplotig	exon	157188780	157188935	100	-	.	Parent=FBgn0085319.1.mrna1;Target=FBgn0085319.1 697 852 +
Chr2	stalkie_big_nohaplotig	exon	157190173	157190354	100	-	.	Parent=FBgn0085319.1.mrna1;Target=FBgn0085319.1 515 696 +
Chr2	stalkie_big_nohaplotig	exon	157190425	157190546	97	-	.	Parent=FBgn0085319.1.mrna1;Target=FBgn0085319.1 393 514 +
Chr2	stalkie_big_nohaplotig	exon	157190607	157190705	98	-	.	Parent=FBgn0085319.1.mrna1;Target=FBgn0085319.1 294 392 +
Chr2	stalkie_big_nohaplotig	exon	157190873	157191005	100	-	.	Parent=FBgn0085319.1.mrna1;Target=FBgn0085319.1 161 293 +
Chr2	stalkie_big_nohaplotig	exon	157191097	157191256	99	-	.	Parent=FBgn0085319.1.mrna1;Target=FBgn0085319.1 1 160 +
Chr2	stalkie_big_nohaplotig	CDS	157188780	157188935	.	-	0	Parent=FBgn0085319.1.mrna1;Target=FBgn0085319.1 697 852 +
Chr2	stalkie_big_nohaplotig	CDS	157190173	157190354	.	-	2	Parent=FBgn0085319.1.mrna1;Target=FBgn0085319.1 515 696 +
Chr2	stalkie_big_nohaplotig	CDS	157190425	157190546	.	-	1	Parent=FBgn0085319.1.mrna1;Target=FBgn0085319.1 393 514 +
Chr2	stalkie_big_nohaplotig	CDS	157190607	157190705	.	-	1	Parent=FBgn0085319.1.mrna1;Target=FBgn0085319.1 294 392 +
Chr2	stalkie_big_nohaplotig	CDS	157190873	157191005	.	-	2	Parent=FBgn0085319.1.mrna1;Target=FBgn0085319.1 161 293 +
Chr2	stalkie_big_nohaplotig	CDS	157191097	157191256	.	-	0	Parent=FBgn0085319.1.mrna1;Target=FBgn0085319.1 1 160 +
Chr2	gffcl	locus	157192986	157202219	.	+	.	ID=RLOC_00023157;geneIDs=comp155436_c0_seq1.path1,comp155773_c2_seq1.path1;transcripts=comp155773_c2_seq1.mrna1,comp155436_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157192986	157196882	.	+	.	ID=comp155773_c2_seq1.mrna1;geneID=comp155773_c2_seq1.path1;Name=comp155773_c2_seq1;Dir=sensecoverage=99.3;identity=98.0;matches=2101;mismatches=40;indels=2;unknowns=0;Target=comp155773_c2_seq1 1243 1428 +;locus=RLOC_00023157
Chr2	stalkie_big_nohaplotig	exon	157192986	157193555	97	+	.	Parent=comp155773_c2_seq1.mrna1;Target=comp155773_c2_seq1 1 570 +
Chr2	stalkie_big_nohaplotig	exon	157193615	157193680	95	+	.	Parent=comp155773_c2_seq1.mrna1;Target=comp155773_c2_seq1 571 638 +
Chr2	stalkie_big_nohaplotig	exon	157195317	157195650	94	+	.	Parent=comp155773_c2_seq1.mrna1;Target=comp155773_c2_seq1 639 972 +
Chr2	stalkie_big_nohaplotig	exon	157195712	157196882	99	+	.	Parent=comp155773_c2_seq1.mrna1;Target=comp155773_c2_seq1 973 2143 +
Chr2	stalkie_big_nohaplotig	CDS	157195982	157196167	.	+	0	Parent=comp155773_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157196859	157202219	.	+	.	ID=comp155436_c0_seq1.mrna1;geneID=comp155436_c0_seq1.path1;Name=comp155436_c0_seq1;Dir=indeterminatecoverage=99.8;identity=99.5;matches=3687;mismatches=11;indels=7;unknowns=0;Target=comp155436_c0_seq1 996 748 .;locus=RLOC_00023157
Chr2	stalkie_big_nohaplotig	exon	157196859	157199044	99	+	.	Parent=comp155436_c0_seq1.mrna1;Target=comp155436_c0_seq1 2201 9 .
Chr2	stalkie_big_nohaplotig	exon	157200645	157201744	99	+	.	Parent=comp155436_c0_seq1.mrna1;Target=comp155436_c0_seq1 3301 2202 .
Chr2	stalkie_big_nohaplotig	exon	157201808	157202219	99	+	.	Parent=comp155436_c0_seq1.mrna1;Target=comp155436_c0_seq1 3713 3302 .
Chr2	stalkie_big_nohaplotig	CDS	157197591	157197839	.	+	0	Parent=comp155436_c0_seq1.mrna1
Chr2	gffcl	locus	157197529	157200727	.	-	.	ID=RLOC_00023158;geneIDs=FBgn0003525.1.path1;transcripts=FBgn0003525.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157197529	157200727	.	-	.	ID=FBgn0003525.1.mrna1;geneID=FBgn0003525.1.path1;Name=FBgn0003525.1;Dir=sensecoverage=100.0;identity=99.6;matches=1593;mismatches=6;indels=0;unknowns=0;locus=RLOC_00023158
Chr2	stalkie_big_nohaplotig	exon	157197529	157199044	99	-	.	Parent=FBgn0003525.1.mrna1;Target=FBgn0003525.1 84 1599 +
Chr2	stalkie_big_nohaplotig	exon	157200645	157200727	100	-	.	Parent=FBgn0003525.1.mrna1;Target=FBgn0003525.1 1 83 +
Chr2	stalkie_big_nohaplotig	CDS	157197529	157199044	.	-	1	Parent=FBgn0003525.1.mrna1;Target=FBgn0003525.1 84 1599 +
Chr2	stalkie_big_nohaplotig	CDS	157200645	157200727	.	-	0	Parent=FBgn0003525.1.mrna1;Target=FBgn0003525.1 1 83 +
Chr2	gffcl	locus	157344248	157344924	.	+	.	ID=RLOC_00023159;geneIDs=comp140150_c0_seq1.path1;transcripts=comp140150_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157344248	157344924	.	+	.	ID=comp140150_c0_seq1.mrna1;geneID=comp140150_c0_seq1.path1;Name=comp140150_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=676;mismatches=1;indels=1;unknowns=0;Target=comp140150_c0_seq1 678 1 .;CDS_Target=comp140150_c0_seq1 221 159 .;locus=RLOC_00023159
Chr2	stalkie_big_nohaplotig	exon	157344248	157344924	99	+	.	Parent=comp140150_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157344406	157344468	.	+	0	Parent=comp140150_c0_seq1.mrna1
Chr2	gffcl	locus	157352392	157354078	.	+	.	ID=RLOC_00023160;geneIDs=comp149921_c0_seq1.path1;transcripts=comp149921_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157352392	157354078	.	+	.	ID=comp149921_c0_seq1.mrna1;geneID=comp149921_c0_seq1.path1;Name=comp149921_c0_seq1;Dir=indeterminatecoverage=99.2;identity=100.0;matches=1687;mismatches=0;indels=0;unknowns=0;Target=comp149921_c0_seq1 1700 14 .;CDS_Target=comp149921_c0_seq1 1077 934 .;locus=RLOC_00023160
Chr2	stalkie_big_nohaplotig	exon	157352392	157354078	100	+	.	Parent=comp149921_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157353312	157353455	.	+	0	Parent=comp149921_c0_seq1.mrna1
Chr2	gffcl	locus	157358822	157362538	.	+	.	ID=RLOC_00023161;geneIDs=FBgn0039688.1.path2;transcripts=FBgn0039688.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	157358822	157362538	.	+	.	ID=FBgn0039688.1.mrna2;geneID=FBgn0039688.1.path2;Name=FBgn0039688.1;Dir=sensecoverage=36.7;identity=100.0;matches=1562;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023161
Chr2	stalkie_big_nohaplotig	exon	157358822	157358950	100	+	.	Parent=FBgn0039688.1.mrna2;Target=FBgn0039688.1 1879 2007 +
Chr2	stalkie_big_nohaplotig	exon	157360325	157361043	100	+	.	Parent=FBgn0039688.1.mrna2;Target=FBgn0039688.1 2008 2726 +
Chr2	stalkie_big_nohaplotig	exon	157361304	157361469	100	+	.	Parent=FBgn0039688.1.mrna2;Target=FBgn0039688.1 2727 2892 +
Chr2	stalkie_big_nohaplotig	exon	157361991	157362538	100	+	.	Parent=FBgn0039688.1.mrna2;Target=FBgn0039688.1 2893 3440 +
Chr2	stalkie_big_nohaplotig	CDS	157358822	157358950	.	+	0	Parent=FBgn0039688.1.mrna2;Target=FBgn0039688.1 1879 2007 +
Chr2	stalkie_big_nohaplotig	CDS	157360325	157361043	.	+	0	Parent=FBgn0039688.1.mrna2;Target=FBgn0039688.1 2008 2726 +
Chr2	stalkie_big_nohaplotig	CDS	157361304	157361469	.	+	1	Parent=FBgn0039688.1.mrna2;Target=FBgn0039688.1 2727 2892 +
Chr2	stalkie_big_nohaplotig	CDS	157361991	157362536	.	+	0	Parent=FBgn0039688.1.mrna2;Target=FBgn0039688.1 2893 3438 +
Chr2	gffcl	locus	157364946	157365259	.	+	.	ID=RLOC_00023162;geneIDs=comp87840_c0_seq1.path2;transcripts=comp87840_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	157364946	157365259	.	+	.	ID=comp87840_c0_seq1.mrna2;geneID=comp87840_c0_seq1.path2;Name=comp87840_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=314;mismatches=0;indels=0;unknowns=0;Target=comp87840_c0_seq1 314 1 .;CDS_Target=comp87840_c0_seq1 36 1 .;locus=RLOC_00023162
Chr2	stalkie_big_nohaplotig	exon	157364946	157365259	100	+	.	Parent=comp87840_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	157364946	157364981	.	+	0	Parent=comp87840_c0_seq1.mrna2
Chr2	gffcl	locus	157365402	157365813	.	-	.	ID=RLOC_00023163;geneIDs=comp137806_c0_seq1.path2;transcripts=comp137806_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	157365402	157365813	.	-	.	ID=comp137806_c0_seq1.mrna2;geneID=comp137806_c0_seq1.path2;Name=comp137806_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=412;mismatches=0;indels=0;unknowns=0;Target=comp137806_c0_seq1 412 1 .;CDS_Target=comp137806_c0_seq1 117 1 .;locus=RLOC_00023163
Chr2	stalkie_big_nohaplotig	exon	157365402	157365813	100	-	.	Parent=comp137806_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	157365697	157365813	.	-	0	Parent=comp137806_c0_seq1.mrna2
Chr2	gffcl	locus	157365853	157366447	.	+	.	ID=RLOC_00023164;geneIDs=comp133913_c1_seq1.path1;transcripts=comp133913_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157365853	157366447	.	+	.	ID=comp133913_c1_seq1.mrna1;geneID=comp133913_c1_seq1.path1;Name=comp133913_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=595;mismatches=0;indels=0;unknowns=0;Target=comp133913_c1_seq1 595 1 .;CDS_Target=comp133913_c1_seq1 126 1 .;locus=RLOC_00023164
Chr2	stalkie_big_nohaplotig	exon	157365853	157366447	100	+	.	Parent=comp133913_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157365853	157365978	.	+	0	Parent=comp133913_c1_seq1.mrna1
Chr2	gffcl	locus	157399516	157408965	.	+	.	ID=RLOC_00023165;geneIDs=FBgn0002528.1.path1;transcripts=FBgn0002528.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157399516	157408965	.	+	.	ID=FBgn0002528.1.mrna1;geneID=FBgn0002528.1.path1;Name=FBgn0002528.1;Dir=sensecoverage=100.0;identity=100.0;matches=4908;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023165
Chr2	stalkie_big_nohaplotig	exon	157399516	157399698	100	+	.	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 1 183 +
Chr2	stalkie_big_nohaplotig	exon	157402834	157402967	100	+	.	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 184 317 +
Chr2	stalkie_big_nohaplotig	exon	157403044	157403171	100	+	.	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 318 445 +
Chr2	stalkie_big_nohaplotig	exon	157403401	157403705	100	+	.	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 446 750 +
Chr2	stalkie_big_nohaplotig	exon	157403822	157404131	100	+	.	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 751 1060 +
Chr2	stalkie_big_nohaplotig	exon	157404499	157404910	100	+	.	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 1061 1472 +
Chr2	stalkie_big_nohaplotig	exon	157404968	157407244	100	+	.	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 1473 3749 +
Chr2	stalkie_big_nohaplotig	exon	157407335	157407542	100	+	.	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 3750 3957 +
Chr2	stalkie_big_nohaplotig	exon	157407600	157407703	100	+	.	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 3958 4061 +
Chr2	stalkie_big_nohaplotig	exon	157407768	157407901	100	+	.	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 4062 4195 +
Chr2	stalkie_big_nohaplotig	exon	157407961	157408076	100	+	.	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 4196 4311 +
Chr2	stalkie_big_nohaplotig	exon	157408138	157408224	100	+	.	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 4312 4398 +
Chr2	stalkie_big_nohaplotig	exon	157408328	157408498	100	+	.	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 4399 4569 +
Chr2	stalkie_big_nohaplotig	exon	157408561	157408690	100	+	.	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 4570 4699 +
Chr2	stalkie_big_nohaplotig	exon	157408757	157408965	100	+	.	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 4700 4908 +
Chr2	stalkie_big_nohaplotig	CDS	157399516	157399698	.	+	0	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 1 183 +
Chr2	stalkie_big_nohaplotig	CDS	157402834	157402967	.	+	0	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 184 317 +
Chr2	stalkie_big_nohaplotig	CDS	157403044	157403171	.	+	1	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 318 445 +
Chr2	stalkie_big_nohaplotig	CDS	157403401	157403705	.	+	2	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 446 750 +
Chr2	stalkie_big_nohaplotig	CDS	157403822	157404131	.	+	0	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 751 1060 +
Chr2	stalkie_big_nohaplotig	CDS	157404499	157404910	.	+	2	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 1061 1472 +
Chr2	stalkie_big_nohaplotig	CDS	157404968	157407244	.	+	1	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 1473 3749 +
Chr2	stalkie_big_nohaplotig	CDS	157407335	157407542	.	+	1	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 3750 3957 +
Chr2	stalkie_big_nohaplotig	CDS	157407600	157407703	.	+	0	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 3958 4061 +
Chr2	stalkie_big_nohaplotig	CDS	157407768	157407901	.	+	1	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 4062 4195 +
Chr2	stalkie_big_nohaplotig	CDS	157407961	157408076	.	+	2	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 4196 4311 +
Chr2	stalkie_big_nohaplotig	CDS	157408138	157408224	.	+	0	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 4312 4398 +
Chr2	stalkie_big_nohaplotig	CDS	157408328	157408498	.	+	0	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 4399 4569 +
Chr2	stalkie_big_nohaplotig	CDS	157408561	157408690	.	+	0	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 4570 4699 +
Chr2	stalkie_big_nohaplotig	CDS	157408757	157408965	.	+	2	Parent=FBgn0002528.1.mrna1;Target=FBgn0002528.1 4700 4908 +
Chr2	gffcl	locus	157452423	157454085	.	+	.	ID=RLOC_00023166;geneIDs=comp71708_c0_seq1.path1;transcripts=comp71708_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157452423	157454085	.	+	.	ID=comp71708_c0_seq1.mrna1;geneID=comp71708_c0_seq1.path1;Name=comp71708_c0_seq1;Dir=antisensecoverage=97.6;identity=99.9;matches=836;mismatches=1;indels=0;unknowns=0;Target=comp71708_c0_seq1 564 677 .;locus=RLOC_00023166
Chr2	stalkie_big_nohaplotig	exon	157452423	157452975	100	+	.	Parent=comp71708_c0_seq1.mrna1;Target=comp71708_c0_seq1 285 837 -
Chr2	stalkie_big_nohaplotig	exon	157453802	157454085	99	+	.	Parent=comp71708_c0_seq1.mrna1;Target=comp71708_c0_seq1 1 284 -
Chr2	stalkie_big_nohaplotig	CDS	157452583	157452696	.	+	0	Parent=comp71708_c0_seq1.mrna1
Chr2	gffcl	locus	157471412	157487367	.	+	.	ID=RLOC_00023167;geneIDs=FBgn0039688.1.path1;transcripts=FBgn0039688.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157471412	157487367	.	+	.	ID=FBgn0039688.1.mrna1;geneID=FBgn0039688.1.path1;Name=FBgn0039688.1;Dir=sensecoverage=36.5;identity=99.9;matches=1551;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023167
Chr2	stalkie_big_nohaplotig	exon	157471412	157471793	100	+	.	Parent=FBgn0039688.1.mrna1;Target=FBgn0039688.1 327 708 +
Chr2	stalkie_big_nohaplotig	exon	157473830	157474733	99	+	.	Parent=FBgn0039688.1.mrna1;Target=FBgn0039688.1 709 1612 +
Chr2	stalkie_big_nohaplotig	exon	157476651	157476791	100	+	.	Parent=FBgn0039688.1.mrna1;Target=FBgn0039688.1 1613 1753 +
Chr2	stalkie_big_nohaplotig	exon	157487243	157487367	100	+	.	Parent=FBgn0039688.1.mrna1;Target=FBgn0039688.1 1754 1878 +
Chr2	stalkie_big_nohaplotig	CDS	157471413	157471793	.	+	0	Parent=FBgn0039688.1.mrna1;Target=FBgn0039688.1 328 708 +
Chr2	stalkie_big_nohaplotig	CDS	157473830	157474733	.	+	0	Parent=FBgn0039688.1.mrna1;Target=FBgn0039688.1 709 1612 +
Chr2	stalkie_big_nohaplotig	CDS	157476651	157476791	.	+	2	Parent=FBgn0039688.1.mrna1;Target=FBgn0039688.1 1613 1753 +
Chr2	stalkie_big_nohaplotig	CDS	157487243	157487367	.	+	2	Parent=FBgn0039688.1.mrna1;Target=FBgn0039688.1 1754 1878 +
Chr2	gffcl	locus	157493689	157494737	.	-	.	ID=RLOC_00023169;geneIDs=FBgn0027610.4.path1;transcripts=FBgn0027610.4.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157493689	157494737	.	-	.	ID=FBgn0027610.4.mrna1;geneID=FBgn0027610.4.path1;Name=FBgn0027610.4;Dir=sensecoverage=100.0;identity=99.9;matches=875;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023169
Chr2	stalkie_big_nohaplotig	exon	157493689	157494003	99	-	.	Parent=FBgn0027610.4.mrna1;Target=FBgn0027610.4 562 876 +
Chr2	stalkie_big_nohaplotig	exon	157494067	157494199	100	-	.	Parent=FBgn0027610.4.mrna1;Target=FBgn0027610.4 429 561 +
Chr2	stalkie_big_nohaplotig	exon	157494253	157494490	100	-	.	Parent=FBgn0027610.4.mrna1;Target=FBgn0027610.4 191 428 +
Chr2	stalkie_big_nohaplotig	exon	157494548	157494737	100	-	.	Parent=FBgn0027610.4.mrna1;Target=FBgn0027610.4 1 190 +
Chr2	stalkie_big_nohaplotig	CDS	157493689	157494003	.	-	0	Parent=FBgn0027610.4.mrna1;Target=FBgn0027610.4 562 876 +
Chr2	stalkie_big_nohaplotig	CDS	157494067	157494199	.	-	1	Parent=FBgn0027610.4.mrna1;Target=FBgn0027610.4 429 561 +
Chr2	stalkie_big_nohaplotig	CDS	157494253	157494490	.	-	2	Parent=FBgn0027610.4.mrna1;Target=FBgn0027610.4 191 428 +
Chr2	stalkie_big_nohaplotig	CDS	157494548	157494737	.	-	0	Parent=FBgn0027610.4.mrna1;Target=FBgn0027610.4 1 190 +
Chr2	gffcl	locus	157578864	157581403	.	+	.	ID=RLOC_00023170;geneIDs=FBgn0011474.1.path1;transcripts=FBgn0011474.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157578864	157581403	.	+	.	ID=FBgn0011474.1.mrna1;geneID=FBgn0011474.1.path1;Name=FBgn0011474.1;Dir=sensecoverage=100.0;identity=100.0;matches=2127;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023170
Chr2	stalkie_big_nohaplotig	exon	157578864	157579185	100	+	.	Parent=FBgn0011474.1.mrna1;Target=FBgn0011474.1 1 322 +
Chr2	stalkie_big_nohaplotig	exon	157579522	157580483	100	+	.	Parent=FBgn0011474.1.mrna1;Target=FBgn0011474.1 323 1284 +
Chr2	stalkie_big_nohaplotig	exon	157580561	157581403	100	+	.	Parent=FBgn0011474.1.mrna1;Target=FBgn0011474.1 1285 2127 +
Chr2	stalkie_big_nohaplotig	CDS	157578864	157579185	.	+	0	Parent=FBgn0011474.1.mrna1;Target=FBgn0011474.1 1 322 +
Chr2	stalkie_big_nohaplotig	CDS	157579522	157580483	.	+	2	Parent=FBgn0011474.1.mrna1;Target=FBgn0011474.1 323 1284 +
Chr2	stalkie_big_nohaplotig	CDS	157580561	157581403	.	+	0	Parent=FBgn0011474.1.mrna1;Target=FBgn0011474.1 1285 2127 +
Chr2	gffcl	locus	157588151	157597395	.	-	.	ID=RLOC_00023171;geneIDs=FBgn0027610.2.path1;transcripts=FBgn0027610.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157588151	157597395	.	-	.	ID=FBgn0027610.2.mrna1;geneID=FBgn0027610.2.path1;Name=FBgn0027610.2;Dir=sensecoverage=100.0;identity=100.0;matches=903;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023171
Chr2	stalkie_big_nohaplotig	exon	157588151	157588459	100	-	.	Parent=FBgn0027610.2.mrna1;Target=FBgn0027610.2 595 903 +
Chr2	stalkie_big_nohaplotig	exon	157588512	157588644	100	-	.	Parent=FBgn0027610.2.mrna1;Target=FBgn0027610.2 462 594 +
Chr2	stalkie_big_nohaplotig	exon	157588705	157588774	100	-	.	Parent=FBgn0027610.2.mrna1;Target=FBgn0027610.2 392 461 +
Chr2	stalkie_big_nohaplotig	exon	157588854	157588949	100	-	.	Parent=FBgn0027610.2.mrna1;Target=FBgn0027610.2 296 391 +
Chr2	stalkie_big_nohaplotig	exon	157589019	157589269	100	-	.	Parent=FBgn0027610.2.mrna1;Target=FBgn0027610.2 45 295 +
Chr2	stalkie_big_nohaplotig	exon	157597352	157597395	100	-	.	Parent=FBgn0027610.2.mrna1;Target=FBgn0027610.2 1 44 +
Chr2	stalkie_big_nohaplotig	CDS	157588151	157588459	.	-	0	Parent=FBgn0027610.2.mrna1;Target=FBgn0027610.2 595 903 +
Chr2	stalkie_big_nohaplotig	CDS	157588512	157588644	.	-	1	Parent=FBgn0027610.2.mrna1;Target=FBgn0027610.2 462 594 +
Chr2	stalkie_big_nohaplotig	CDS	157588705	157588774	.	-	2	Parent=FBgn0027610.2.mrna1;Target=FBgn0027610.2 392 461 +
Chr2	stalkie_big_nohaplotig	CDS	157588854	157588949	.	-	2	Parent=FBgn0027610.2.mrna1;Target=FBgn0027610.2 296 391 +
Chr2	stalkie_big_nohaplotig	CDS	157589019	157589269	.	-	1	Parent=FBgn0027610.2.mrna1;Target=FBgn0027610.2 45 295 +
Chr2	stalkie_big_nohaplotig	CDS	157597352	157597395	.	-	0	Parent=FBgn0027610.2.mrna1;Target=FBgn0027610.2 1 44 +
Chr2	gffcl	locus	157590684	157610587	.	+	.	ID=RLOC_00023172;geneIDs=FBgn0086371.1.path1,comp142572_c4_seq1.path1;transcripts=FBgn0086371.1.mrna1,comp142572_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157590684	157610587	.	+	.	ID=FBgn0086371.1.mrna1;geneID=FBgn0086371.1.path1;Name=FBgn0086371.1;Dir=sensecoverage=100.0;identity=99.1;matches=914;mismatches=3;indels=5;unknowns=0;Target=FBgn0086371.1 175 921 +;locus=RLOC_00023172
Chr2	stalkie_big_nohaplotig	exon	157590684	157590788	92	+	.	Parent=FBgn0086371.1.mrna1;Target=FBgn0086371.1 1 108 +
Chr2	stalkie_big_nohaplotig	exon	157609775	157610587	100	+	.	Parent=FBgn0086371.1.mrna1;Target=FBgn0086371.1 109 921 +
Chr2	stalkie_big_nohaplotig	CDS	157609841	157610587	.	+	0	Parent=FBgn0086371.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157599701	157609798	.	+	.	ID=comp142572_c4_seq1.mrna1;geneID=comp142572_c4_seq1.path1;Name=comp142572_c4_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=379;mismatches=0;indels=0;unknowns=0;Target=comp142572_c4_seq1 84 203 .;locus=RLOC_00023172
Chr2	stalkie_big_nohaplotig	exon	157599701	157600055	100	+	.	Parent=comp142572_c4_seq1.mrna1;Target=comp142572_c4_seq1 25 379 -
Chr2	stalkie_big_nohaplotig	exon	157609775	157609798	100	+	.	Parent=comp142572_c4_seq1.mrna1;Target=comp142572_c4_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	CDS	157599877	157599996	.	+	0	Parent=comp142572_c4_seq1.mrna1
Chr2	gffcl	locus	157635476	157635829	.	-	.	ID=RLOC_00023174;geneIDs=comp1251383_c0_seq1.path1;transcripts=comp1251383_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157635476	157635829	.	-	.	ID=comp1251383_c0_seq1.mrna1;geneID=comp1251383_c0_seq1.path1;Name=comp1251383_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=298;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023174
Chr2	stalkie_big_nohaplotig	exon	157635476	157635516	97	-	.	Parent=comp1251383_c0_seq1.mrna1;Target=comp1251383_c0_seq1 300 260 .
Chr2	stalkie_big_nohaplotig	exon	157635571	157635829	99	-	.	Parent=comp1251383_c0_seq1.mrna1;Target=comp1251383_c0_seq1 259 1 .
Chr2	stalkie_big_nohaplotig	CDS	157635477	157635516	.	-	1	Parent=comp1251383_c0_seq1.mrna1;Target=comp1251383_c0_seq1 299 260 .
Chr2	stalkie_big_nohaplotig	CDS	157635571	157635632	.	-	0	Parent=comp1251383_c0_seq1.mrna1;Target=comp1251383_c0_seq1 259 198 .
Chr2	gffcl	locus	157638771	157639096	.	-	.	ID=RLOC_00023175;geneIDs=comp141049_c0_seq1.path1;transcripts=comp141049_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157638771	157639096	.	-	.	ID=comp141049_c0_seq1.mrna1;geneID=comp141049_c0_seq1.path1;Name=comp141049_c0_seq1;Dir=indeterminatecoverage=90.1;identity=99.1;matches=323;mismatches=3;indels=0;unknowns=0;Target=comp141049_c0_seq1 334 9 .;CDS_Target=comp141049_c0_seq1 138 10 .;locus=RLOC_00023175
Chr2	stalkie_big_nohaplotig	exon	157638771	157639096	99	-	.	Parent=comp141049_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157638967	157639095	.	-	0	Parent=comp141049_c0_seq1.mrna1
Chr2	gffcl	locus	157680947	157688528	.	+	.	ID=RLOC_00023176;geneIDs=FBgn0038140.1.path1;transcripts=FBgn0038140.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157680947	157688528	.	+	.	ID=FBgn0038140.1.mrna1;geneID=FBgn0038140.1.path1;Name=FBgn0038140.1;Dir=sensecoverage=100.0;identity=99.5;matches=2558;mismatches=13;indels=0;unknowns=0;locus=RLOC_00023176
Chr2	stalkie_big_nohaplotig	exon	157680947	157681526	99	+	.	Parent=FBgn0038140.1.mrna1;Target=FBgn0038140.1 1 580 +
Chr2	stalkie_big_nohaplotig	exon	157684449	157684614	98	+	.	Parent=FBgn0038140.1.mrna1;Target=FBgn0038140.1 581 746 +
Chr2	stalkie_big_nohaplotig	exon	157684814	157684946	99	+	.	Parent=FBgn0038140.1.mrna1;Target=FBgn0038140.1 747 879 +
Chr2	stalkie_big_nohaplotig	exon	157685219	157685417	99	+	.	Parent=FBgn0038140.1.mrna1;Target=FBgn0038140.1 880 1078 +
Chr2	stalkie_big_nohaplotig	exon	157686846	157687060	99	+	.	Parent=FBgn0038140.1.mrna1;Target=FBgn0038140.1 1079 1293 +
Chr2	stalkie_big_nohaplotig	exon	157687251	157688528	99	+	.	Parent=FBgn0038140.1.mrna1;Target=FBgn0038140.1 1294 2571 +
Chr2	stalkie_big_nohaplotig	CDS	157680947	157681526	.	+	0	Parent=FBgn0038140.1.mrna1;Target=FBgn0038140.1 1 580 +
Chr2	stalkie_big_nohaplotig	CDS	157684449	157684614	.	+	2	Parent=FBgn0038140.1.mrna1;Target=FBgn0038140.1 581 746 +
Chr2	stalkie_big_nohaplotig	CDS	157684814	157684946	.	+	1	Parent=FBgn0038140.1.mrna1;Target=FBgn0038140.1 747 879 +
Chr2	stalkie_big_nohaplotig	CDS	157685219	157685417	.	+	0	Parent=FBgn0038140.1.mrna1;Target=FBgn0038140.1 880 1078 +
Chr2	stalkie_big_nohaplotig	CDS	157686846	157687060	.	+	2	Parent=FBgn0038140.1.mrna1;Target=FBgn0038140.1 1079 1293 +
Chr2	stalkie_big_nohaplotig	CDS	157687251	157688528	.	+	0	Parent=FBgn0038140.1.mrna1;Target=FBgn0038140.1 1294 2571 +
Chr2	gffcl	locus	157702255	157707582	.	-	.	ID=RLOC_00023177;geneIDs=FBgn0052473.1.path1;transcripts=FBgn0052473.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157702255	157707582	.	-	.	ID=FBgn0052473.1.mrna1;geneID=FBgn0052473.1.path1;Name=FBgn0052473.1;Dir=sensecoverage=99.9;identity=99.7;matches=3038;mismatches=9;indels=0;unknowns=0;locus=RLOC_00023177
Chr2	stalkie_big_nohaplotig	exon	157702255	157702630	100	-	.	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 2676 3051 +
Chr2	stalkie_big_nohaplotig	exon	157702766	157703044	99	-	.	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 2397 2675 +
Chr2	stalkie_big_nohaplotig	exon	157703101	157703506	99	-	.	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 1991 2396 +
Chr2	stalkie_big_nohaplotig	exon	157703567	157703652	100	-	.	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 1905 1990 +
Chr2	stalkie_big_nohaplotig	exon	157703714	157703857	100	-	.	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 1761 1904 +
Chr2	stalkie_big_nohaplotig	exon	157703923	157704050	100	-	.	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 1633 1760 +
Chr2	stalkie_big_nohaplotig	exon	157704101	157704262	99	-	.	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 1471 1632 +
Chr2	stalkie_big_nohaplotig	exon	157704323	157704420	100	-	.	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 1373 1470 +
Chr2	stalkie_big_nohaplotig	exon	157704490	157704931	99	-	.	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 931 1372 +
Chr2	stalkie_big_nohaplotig	exon	157704994	157705141	100	-	.	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 783 930 +
Chr2	stalkie_big_nohaplotig	exon	157705269	157705812	99	-	.	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 239 782 +
Chr2	stalkie_big_nohaplotig	exon	157707349	157707582	99	-	.	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 5 238 +
Chr2	stalkie_big_nohaplotig	CDS	157702255	157702630	.	-	1	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 2676 3051 +
Chr2	stalkie_big_nohaplotig	CDS	157702766	157703044	.	-	1	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 2397 2675 +
Chr2	stalkie_big_nohaplotig	CDS	157703101	157703506	.	-	2	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 1991 2396 +
Chr2	stalkie_big_nohaplotig	CDS	157703567	157703652	.	-	1	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 1905 1990 +
Chr2	stalkie_big_nohaplotig	CDS	157703714	157703857	.	-	1	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 1761 1904 +
Chr2	stalkie_big_nohaplotig	CDS	157703923	157704050	.	-	0	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 1633 1760 +
Chr2	stalkie_big_nohaplotig	CDS	157704101	157704262	.	-	0	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 1471 1632 +
Chr2	stalkie_big_nohaplotig	CDS	157704323	157704420	.	-	2	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 1373 1470 +
Chr2	stalkie_big_nohaplotig	CDS	157704490	157704931	.	-	0	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 931 1372 +
Chr2	stalkie_big_nohaplotig	CDS	157704994	157705141	.	-	1	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 783 930 +
Chr2	stalkie_big_nohaplotig	CDS	157705269	157705812	.	-	2	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 239 782 +
Chr2	stalkie_big_nohaplotig	CDS	157707349	157707580	.	-	0	Parent=FBgn0052473.1.mrna1;Target=FBgn0052473.1 7 238 +
Chr2	gffcl	locus	157707929	157708327	.	-	.	ID=RLOC_00023178;geneIDs=comp134617_c1_seq1.path1;transcripts=comp134617_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157707929	157708327	.	-	.	ID=comp134617_c1_seq1.mrna1;geneID=comp134617_c1_seq1.path1;Name=comp134617_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=396;mismatches=3;indels=0;unknowns=0;Target=comp134617_c1_seq1 399 1 .;CDS_Target=comp134617_c1_seq1 147 76 .;locus=RLOC_00023178
Chr2	stalkie_big_nohaplotig	exon	157707929	157708327	99	-	.	Parent=comp134617_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157708181	157708252	.	-	0	Parent=comp134617_c1_seq1.mrna1
Chr2	gffcl	locus	157710353	157710477	.	-	.	ID=RLOC_00023179;geneIDs=comp153173_c0_seq1.path2;transcripts=comp153173_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	157710353	157710477	.	-	.	ID=comp153173_c0_seq1.mrna2;geneID=comp153173_c0_seq1.path2;Name=comp153173_c0_seq1;Dir=indeterminatecoverage=18.1;identity=100.0;matches=125;mismatches=0;indels=0;unknowns=0;Target=comp153173_c0_seq1 689 565 .;locus=RLOC_00023179
Chr2	stalkie_big_nohaplotig	exon	157710353	157710477	100	-	.	Parent=comp153173_c0_seq1.mrna2
Chr2	gffcl	locus	157714898	157715140	.	-	.	ID=RLOC_00023180;geneIDs=comp115547_c0_seq1.path1;transcripts=comp115547_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157714898	157715140	.	-	.	ID=comp115547_c0_seq1.mrna1;geneID=comp115547_c0_seq1.path1;Name=comp115547_c0_seq1;Dir=indeterminatecoverage=75.0;identity=100.0;matches=243;mismatches=0;indels=0;unknowns=0;Target=comp115547_c0_seq1 243 1 .;CDS_Target=comp115547_c0_seq1 96 1 .;locus=RLOC_00023180
Chr2	stalkie_big_nohaplotig	exon	157714898	157715140	100	-	.	Parent=comp115547_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157715045	157715140	.	-	0	Parent=comp115547_c0_seq1.mrna1
Chr2	gffcl	locus	157717396	157717935	.	-	.	ID=RLOC_00023181;geneIDs=comp231975_c0_seq1.path1;transcripts=comp231975_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157717396	157717935	.	-	.	ID=comp231975_c0_seq1.mrna1;geneID=comp231975_c0_seq1.path1;Name=comp231975_c0_seq1;Dir=sensecoverage=99.8;identity=100.0;matches=484;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023181
Chr2	stalkie_big_nohaplotig	exon	157717396	157717808	100	-	.	Parent=comp231975_c0_seq1.mrna1;Target=comp231975_c0_seq1 72 484 +
Chr2	stalkie_big_nohaplotig	exon	157717865	157717935	100	-	.	Parent=comp231975_c0_seq1.mrna1;Target=comp231975_c0_seq1 1 71 +
Chr2	stalkie_big_nohaplotig	CDS	157717549	157717808	.	-	2	Parent=comp231975_c0_seq1.mrna1;Target=comp231975_c0_seq1 72 331 +
Chr2	stalkie_big_nohaplotig	CDS	157717865	157717883	.	-	0	Parent=comp231975_c0_seq1.mrna1;Target=comp231975_c0_seq1 53 71 +
Chr2	gffcl	locus	157723123	157727471	.	-	.	ID=RLOC_00023182;geneIDs=FBgn0038135.2.path1;transcripts=FBgn0038135.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157723123	157727471	.	-	.	ID=FBgn0038135.2.mrna1;geneID=FBgn0038135.2.path1;Name=FBgn0038135.2;Dir=sensecoverage=100.0;identity=99.5;matches=2830;mismatches=14;indels=0;unknowns=0;locus=RLOC_00023182
Chr2	stalkie_big_nohaplotig	exon	157723123	157723486	99	-	.	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 2481 2844 +
Chr2	stalkie_big_nohaplotig	exon	157723551	157723829	99	-	.	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 2202 2480 +
Chr2	stalkie_big_nohaplotig	exon	157723893	157724008	100	-	.	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 2086 2201 +
Chr2	stalkie_big_nohaplotig	exon	157724066	157724230	99	-	.	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 1921 2085 +
Chr2	stalkie_big_nohaplotig	exon	157724291	157724507	99	-	.	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 1704 1920 +
Chr2	stalkie_big_nohaplotig	exon	157724561	157724707	98	-	.	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 1557 1703 +
Chr2	stalkie_big_nohaplotig	exon	157724778	157725064	99	-	.	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 1270 1556 +
Chr2	stalkie_big_nohaplotig	exon	157725130	157725227	100	-	.	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 1172 1269 +
Chr2	stalkie_big_nohaplotig	exon	157725436	157725606	99	-	.	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 1001 1171 +
Chr2	stalkie_big_nohaplotig	exon	157725675	157725939	99	-	.	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 736 1000 +
Chr2	stalkie_big_nohaplotig	exon	157725996	157726143	100	-	.	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 588 735 +
Chr2	stalkie_big_nohaplotig	exon	157726384	157726751	99	-	.	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 220 587 +
Chr2	stalkie_big_nohaplotig	exon	157727253	157727471	99	-	.	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 1 219 +
Chr2	stalkie_big_nohaplotig	CDS	157723123	157723486	.	-	1	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 2481 2844 +
Chr2	stalkie_big_nohaplotig	CDS	157723551	157723829	.	-	1	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 2202 2480 +
Chr2	stalkie_big_nohaplotig	CDS	157723893	157724008	.	-	0	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 2086 2201 +
Chr2	stalkie_big_nohaplotig	CDS	157724066	157724230	.	-	0	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 1921 2085 +
Chr2	stalkie_big_nohaplotig	CDS	157724291	157724507	.	-	1	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 1704 1920 +
Chr2	stalkie_big_nohaplotig	CDS	157724561	157724707	.	-	1	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 1557 1703 +
Chr2	stalkie_big_nohaplotig	CDS	157724778	157725064	.	-	0	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 1270 1556 +
Chr2	stalkie_big_nohaplotig	CDS	157725130	157725227	.	-	2	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 1172 1269 +
Chr2	stalkie_big_nohaplotig	CDS	157725436	157725606	.	-	2	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 1001 1171 +
Chr2	stalkie_big_nohaplotig	CDS	157725675	157725939	.	-	0	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 736 1000 +
Chr2	stalkie_big_nohaplotig	CDS	157725996	157726143	.	-	1	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 588 735 +
Chr2	stalkie_big_nohaplotig	CDS	157726384	157726751	.	-	0	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 220 587 +
Chr2	stalkie_big_nohaplotig	CDS	157727253	157727471	.	-	0	Parent=FBgn0038135.2.mrna1;Target=FBgn0038135.2 1 219 +
Chr2	gffcl	locus	157730618	157734451	.	-	.	ID=RLOC_00023183;geneIDs=FBgn0038135.1.path1;transcripts=FBgn0038135.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157730618	157734451	.	-	.	ID=FBgn0038135.1.mrna1;geneID=FBgn0038135.1.path1;Name=FBgn0038135.1;Dir=sensecoverage=100.0;identity=99.2;matches=2904;mismatches=24;indels=0;unknowns=0;locus=RLOC_00023183
Chr2	stalkie_big_nohaplotig	exon	157730618	157730999	99	-	.	Parent=FBgn0038135.1.mrna1;Target=FBgn0038135.1 2547 2928 +
Chr2	stalkie_big_nohaplotig	exon	157731144	157731422	99	-	.	Parent=FBgn0038135.1.mrna1;Target=FBgn0038135.1 2268 2546 +
Chr2	stalkie_big_nohaplotig	exon	157731476	157731753	99	-	.	Parent=FBgn0038135.1.mrna1;Target=FBgn0038135.1 1990 2267 +
Chr2	stalkie_big_nohaplotig	exon	157731820	157731947	99	-	.	Parent=FBgn0038135.1.mrna1;Target=FBgn0038135.1 1862 1989 +
Chr2	stalkie_big_nohaplotig	exon	157732019	157732104	98	-	.	Parent=FBgn0038135.1.mrna1;Target=FBgn0038135.1 1776 1861 +
Chr2	stalkie_big_nohaplotig	exon	157732211	157732644	99	-	.	Parent=FBgn0038135.1.mrna1;Target=FBgn0038135.1 1342 1775 +
Chr2	stalkie_big_nohaplotig	exon	157732756	157732853	100	-	.	Parent=FBgn0038135.1.mrna1;Target=FBgn0038135.1 1244 1341 +
Chr2	stalkie_big_nohaplotig	exon	157732950	157733120	100	-	.	Parent=FBgn0038135.1.mrna1;Target=FBgn0038135.1 1073 1243 +
Chr2	stalkie_big_nohaplotig	exon	157733254	157733666	98	-	.	Parent=FBgn0038135.1.mrna1;Target=FBgn0038135.1 660 1072 +
Chr2	stalkie_big_nohaplotig	exon	157733733	157734103	97	-	.	Parent=FBgn0038135.1.mrna1;Target=FBgn0038135.1 289 659 +
Chr2	stalkie_big_nohaplotig	exon	157734164	157734451	99	-	.	Parent=FBgn0038135.1.mrna1;Target=FBgn0038135.1 1 288 +
Chr2	stalkie_big_nohaplotig	CDS	157730618	157730999	.	-	1	Parent=FBgn0038135.1.mrna1;Target=FBgn0038135.1 2547 2928 +
Chr2	stalkie_big_nohaplotig	CDS	157731144	157731422	.	-	1	Parent=FBgn0038135.1.mrna1;Target=FBgn0038135.1 2268 2546 +
Chr2	stalkie_big_nohaplotig	CDS	157731476	157731753	.	-	0	Parent=FBgn0038135.1.mrna1;Target=FBgn0038135.1 1990 2267 +
Chr2	stalkie_big_nohaplotig	CDS	157731820	157731947	.	-	2	Parent=FBgn0038135.1.mrna1;Target=FBgn0038135.1 1862 1989 +
Chr2	stalkie_big_nohaplotig	CDS	157732019	157732104	.	-	1	Parent=FBgn0038135.1.mrna1;Target=FBgn0038135.1 1776 1861 +
Chr2	stalkie_big_nohaplotig	CDS	157732211	157732644	.	-	0	Parent=FBgn0038135.1.mrna1;Target=FBgn0038135.1 1342 1775 +
Chr2	stalkie_big_nohaplotig	CDS	157732756	157732853	.	-	2	Parent=FBgn0038135.1.mrna1;Target=FBgn0038135.1 1244 1341 +
Chr2	stalkie_big_nohaplotig	CDS	157732950	157733120	.	-	2	Parent=FBgn0038135.1.mrna1;Target=FBgn0038135.1 1073 1243 +
Chr2	stalkie_big_nohaplotig	CDS	157733254	157733666	.	-	1	Parent=FBgn0038135.1.mrna1;Target=FBgn0038135.1 660 1072 +
Chr2	stalkie_big_nohaplotig	CDS	157733733	157734103	.	-	0	Parent=FBgn0038135.1.mrna1;Target=FBgn0038135.1 289 659 +
Chr2	stalkie_big_nohaplotig	CDS	157734164	157734451	.	-	0	Parent=FBgn0038135.1.mrna1;Target=FBgn0038135.1 1 288 +
Chr2	gffcl	locus	157752754	157769386	.	-	.	ID=RLOC_00023184;geneIDs=FBgn0038130.1.path1,FBgn0039756.1.path2,comp144969_c0_seq1.path1;transcripts=FBgn0038130.1.mrna1,comp144969_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157752754	157761900	.	-	.	ID=FBgn0038130.1.mrna1;geneID=FBgn0038130.1.path1;Name=FBgn0038130.1;Dir=sensecoverage=100.0;identity=99.5;matches=1281;mismatches=6;indels=0;unknowns=0;locus=RLOC_00023184
Chr2	stalkie_big_nohaplotig	exon	157752754	157752995	99	-	.	Parent=FBgn0038130.1.mrna1;Target=FBgn0038130.1 1046 1287 +
Chr2	stalkie_big_nohaplotig	exon	157753071	157753417	99	-	.	Parent=FBgn0038130.1.mrna1;Target=FBgn0038130.1 699 1045 +
Chr2	stalkie_big_nohaplotig	exon	157753486	157753822	99	-	.	Parent=FBgn0038130.1.mrna1;Target=FBgn0038130.1 362 698 +
Chr2	stalkie_big_nohaplotig	exon	157754881	157755226	100	-	.	Parent=FBgn0038130.1.mrna1;Target=FBgn0038130.1 16 361 +
Chr2	stalkie_big_nohaplotig	exon	157761886	157761900	100	-	.	Parent=FBgn0038130.1.mrna1;Target=FBgn0038130.1 1 15 +
Chr2	stalkie_big_nohaplotig	CDS	157752754	157752995	.	-	2	Parent=FBgn0038130.1.mrna1;Target=FBgn0038130.1 1046 1287 +
Chr2	stalkie_big_nohaplotig	CDS	157753071	157753417	.	-	1	Parent=FBgn0038130.1.mrna1;Target=FBgn0038130.1 699 1045 +
Chr2	stalkie_big_nohaplotig	CDS	157753486	157753822	.	-	2	Parent=FBgn0038130.1.mrna1;Target=FBgn0038130.1 362 698 +
Chr2	stalkie_big_nohaplotig	CDS	157754881	157755226	.	-	0	Parent=FBgn0038130.1.mrna1;Target=FBgn0038130.1 16 361 +
Chr2	stalkie_big_nohaplotig	CDS	157761886	157761900	.	-	0	Parent=FBgn0038130.1.mrna1;Target=FBgn0038130.1 1 15 +
Chr2	stalkie_big_nohaplotig	mRNA	157755207	157769386	.	-	.	ID=comp144969_c0_seq1.mrna1;geneID=comp144969_c0_seq1.path1;Name=comp144969_c0_seq1;Dir=sensecoverage=100.0;identity=98.3;matches=293;mismatches=5;indels=0;unknowns=0;locus=RLOC_00023184
Chr2	stalkie_big_nohaplotig	exon	157755207	157755226	100	-	.	Parent=comp144969_c0_seq1.mrna1;Target=comp144969_c0_seq1 279 298 +
Chr2	stalkie_big_nohaplotig	exon	157764964	157765151	99	-	.	Parent=comp144969_c0_seq1.mrna1;Target=comp144969_c0_seq1 91 278 +
Chr2	stalkie_big_nohaplotig	exon	157769297	157769386	95	-	.	Parent=comp144969_c0_seq1.mrna1;Target=comp144969_c0_seq1 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	157765138	157765151	.	-	2	Parent=comp144969_c0_seq1.mrna1;Target=comp144969_c0_seq1 91 104 +
Chr2	stalkie_big_nohaplotig	CDS	157769297	157769384	.	-	0	Parent=comp144969_c0_seq1.mrna1;Target=comp144969_c0_seq1 3 90 +
Chr2	gffcl	locus	157783744	157786925	.	+	.	ID=RLOC_00023185;geneIDs=FBgn0038129.1.path1;transcripts=FBgn0038129.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157783744	157786925	.	+	.	ID=FBgn0038129.1.mrna1;geneID=FBgn0038129.1.path1;Name=FBgn0038129.1;Dir=sensecoverage=100.0;identity=99.8;matches=2107;mismatches=5;indels=0;unknowns=0;locus=RLOC_00023185
Chr2	stalkie_big_nohaplotig	exon	157783744	157783910	99	+	.	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 1 167 +
Chr2	stalkie_big_nohaplotig	exon	157783982	157784161	98	+	.	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 168 347 +
Chr2	stalkie_big_nohaplotig	exon	157784225	157784309	98	+	.	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 348 432 +
Chr2	stalkie_big_nohaplotig	exon	157784368	157784484	100	+	.	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 433 549 +
Chr2	stalkie_big_nohaplotig	exon	157784539	157784687	100	+	.	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 550 698 +
Chr2	stalkie_big_nohaplotig	exon	157784746	157784796	100	+	.	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 699 749 +
Chr2	stalkie_big_nohaplotig	exon	157784850	157784946	100	+	.	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 750 846 +
Chr2	stalkie_big_nohaplotig	exon	157785000	157785136	100	+	.	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 847 983 +
Chr2	stalkie_big_nohaplotig	exon	157785540	157785682	100	+	.	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 984 1126 +
Chr2	stalkie_big_nohaplotig	exon	157785772	157785878	100	+	.	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 1127 1233 +
Chr2	stalkie_big_nohaplotig	exon	157785952	157786260	99	+	.	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 1234 1542 +
Chr2	stalkie_big_nohaplotig	exon	157786356	157786925	100	+	.	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 1543 2112 +
Chr2	stalkie_big_nohaplotig	CDS	157783744	157783910	.	+	0	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 1 167 +
Chr2	stalkie_big_nohaplotig	CDS	157783982	157784161	.	+	1	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 168 347 +
Chr2	stalkie_big_nohaplotig	CDS	157784225	157784309	.	+	1	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 348 432 +
Chr2	stalkie_big_nohaplotig	CDS	157784368	157784484	.	+	0	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 433 549 +
Chr2	stalkie_big_nohaplotig	CDS	157784539	157784687	.	+	0	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 550 698 +
Chr2	stalkie_big_nohaplotig	CDS	157784746	157784796	.	+	1	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 699 749 +
Chr2	stalkie_big_nohaplotig	CDS	157784850	157784946	.	+	1	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 750 846 +
Chr2	stalkie_big_nohaplotig	CDS	157785000	157785136	.	+	0	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 847 983 +
Chr2	stalkie_big_nohaplotig	CDS	157785540	157785682	.	+	1	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 984 1126 +
Chr2	stalkie_big_nohaplotig	CDS	157785772	157785878	.	+	2	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 1127 1233 +
Chr2	stalkie_big_nohaplotig	CDS	157785952	157786260	.	+	0	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 1234 1542 +
Chr2	stalkie_big_nohaplotig	CDS	157786356	157786925	.	+	0	Parent=FBgn0038129.1.mrna1;Target=FBgn0038129.1 1543 2112 +
Chr2	gffcl	locus	157792880	157794024	.	-	.	ID=RLOC_00023186;geneIDs=FBgn0083985.1.path1;transcripts=FBgn0083985.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157792880	157794024	.	-	.	ID=FBgn0083985.1.mrna1;geneID=FBgn0083985.1.path1;Name=FBgn0083985.1;Dir=sensecoverage=100.0;identity=100.0;matches=1017;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023186
Chr2	stalkie_big_nohaplotig	exon	157792880	157793450	100	-	.	Parent=FBgn0083985.1.mrna1;Target=FBgn0083985.1 447 1017 +
Chr2	stalkie_big_nohaplotig	exon	157793509	157793913	100	-	.	Parent=FBgn0083985.1.mrna1;Target=FBgn0083985.1 42 446 +
Chr2	stalkie_big_nohaplotig	exon	157793984	157794024	100	-	.	Parent=FBgn0083985.1.mrna1;Target=FBgn0083985.1 1 41 +
Chr2	stalkie_big_nohaplotig	CDS	157792880	157793450	.	-	1	Parent=FBgn0083985.1.mrna1;Target=FBgn0083985.1 447 1017 +
Chr2	stalkie_big_nohaplotig	CDS	157793509	157793913	.	-	1	Parent=FBgn0083985.1.mrna1;Target=FBgn0083985.1 42 446 +
Chr2	stalkie_big_nohaplotig	CDS	157793984	157794024	.	-	0	Parent=FBgn0083985.1.mrna1;Target=FBgn0083985.1 1 41 +
Chr2	gffcl	locus	157795777	157798529	.	-	.	ID=RLOC_00023187;geneIDs=FBgn0003178.1.path1,comp150784_c0_seq1.path1;transcripts=FBgn0003178.1.mrna1,comp150784_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157795777	157798529	.	-	.	ID=FBgn0003178.1.mrna1;geneID=FBgn0003178.1.path1;Name=FBgn0003178.1;Dir=sensecoverage=99.4;identity=100.0;matches=1766;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023187
Chr2	stalkie_big_nohaplotig	exon	157795777	157795933	100	-	.	Parent=FBgn0003178.1.mrna1;Target=FBgn0003178.1 1610 1766 +
Chr2	stalkie_big_nohaplotig	exon	157795998	157797393	100	-	.	Parent=FBgn0003178.1.mrna1;Target=FBgn0003178.1 214 1609 +
Chr2	stalkie_big_nohaplotig	exon	157798317	157798529	100	-	.	Parent=FBgn0003178.1.mrna1;Target=FBgn0003178.1 1 213 +
Chr2	stalkie_big_nohaplotig	CDS	157795779	157795933	.	-	2	Parent=FBgn0003178.1.mrna1;Target=FBgn0003178.1 1610 1764 +
Chr2	stalkie_big_nohaplotig	CDS	157795998	157797393	.	-	0	Parent=FBgn0003178.1.mrna1;Target=FBgn0003178.1 214 1609 +
Chr2	stalkie_big_nohaplotig	CDS	157798317	157798529	.	-	0	Parent=FBgn0003178.1.mrna1;Target=FBgn0003178.1 1 213 +
Chr2	stalkie_big_nohaplotig	mRNA	157797373	157798340	.	-	.	ID=comp150784_c0_seq1.mrna1;geneID=comp150784_c0_seq1.path1;Name=comp150784_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=968;mismatches=0;indels=5;unknowns=0;Target=comp150784_c0_seq1 973 1 .;CDS_Target=comp150784_c0_seq1 911 708 .;locus=RLOC_00023187
Chr2	stalkie_big_nohaplotig	exon	157797373	157798340	99	-	.	Parent=comp150784_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157797432	157797635	.	-	0	Parent=comp150784_c0_seq1.mrna1
Chr2	gffcl	locus	157806133	157807447	.	+	.	ID=RLOC_00023188;geneIDs=FBgn0039650.1.path1;transcripts=FBgn0039650.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157806133	157807447	.	+	.	ID=FBgn0039650.1.mrna1;geneID=FBgn0039650.1.path1;Name=FBgn0039650.1;Dir=sensecoverage=100.0;identity=99.3;matches=581;mismatches=3;indels=1;unknowns=0;locus=RLOC_00023188
Chr2	stalkie_big_nohaplotig	exon	157806133	157806400	98	+	.	Parent=FBgn0039650.1.mrna1;Target=FBgn0039650.1 1 268 +
Chr2	stalkie_big_nohaplotig	exon	157807132	157807447	99	+	.	Parent=FBgn0039650.1.mrna1;Target=FBgn0039650.1 269 585 +
Chr2	stalkie_big_nohaplotig	CDS	157806133	157806400	.	+	0	Parent=FBgn0039650.1.mrna1;Target=FBgn0039650.1 1 268 +
Chr2	stalkie_big_nohaplotig	CDS	157807132	157807447	.	+	2	Parent=FBgn0039650.1.mrna1;Target=FBgn0039650.1 269 585 +
Chr2	gffcl	locus	157843450	157868038	.	+	.	ID=RLOC_00023190;geneIDs=FBgn0039647.1.path1;transcripts=FBgn0039647.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157843450	157868038	.	+	.	ID=FBgn0039647.1.mrna1;geneID=FBgn0039647.1.path1;Name=FBgn0039647.1;Dir=sensecoverage=99.9;identity=99.8;matches=1422;mismatches=3;indels=0;unknowns=11;locus=RLOC_00023190
Chr2	stalkie_big_nohaplotig	exon	157843450	157844113	99	+	.	Parent=FBgn0039647.1.mrna1;Target=FBgn0039647.1 1 664 +
Chr2	stalkie_big_nohaplotig	exon	157854799	157854951	100	+	.	Parent=FBgn0039647.1.mrna1;Target=FBgn0039647.1 665 817 +
Chr2	stalkie_big_nohaplotig	exon	157859800	157859940	100	+	.	Parent=FBgn0039647.1.mrna1;Target=FBgn0039647.1 818 958 +
Chr2	stalkie_big_nohaplotig	exon	157860034	157860148	99	+	.	Parent=FBgn0039647.1.mrna1;Target=FBgn0039647.1 959 1073 +
Chr2	stalkie_big_nohaplotig	exon	157862016	157862212	99	+	.	Parent=FBgn0039647.1.mrna1;Target=FBgn0039647.1 1074 1270 +
Chr2	stalkie_big_nohaplotig	exon	157867873	157868038	100	+	.	Parent=FBgn0039647.1.mrna1;Target=FBgn0039647.1 1271 1436 +
Chr2	stalkie_big_nohaplotig	CDS	157843450	157844113	.	+	0	Parent=FBgn0039647.1.mrna1;Target=FBgn0039647.1 1 664 +
Chr2	stalkie_big_nohaplotig	CDS	157854799	157854951	.	+	2	Parent=FBgn0039647.1.mrna1;Target=FBgn0039647.1 665 817 +
Chr2	stalkie_big_nohaplotig	CDS	157859800	157859940	.	+	2	Parent=FBgn0039647.1.mrna1;Target=FBgn0039647.1 818 958 +
Chr2	stalkie_big_nohaplotig	CDS	157860034	157860148	.	+	2	Parent=FBgn0039647.1.mrna1;Target=FBgn0039647.1 959 1073 +
Chr2	stalkie_big_nohaplotig	CDS	157862016	157862212	.	+	1	Parent=FBgn0039647.1.mrna1;Target=FBgn0039647.1 1074 1270 +
Chr2	stalkie_big_nohaplotig	CDS	157867873	157868036	.	+	2	Parent=FBgn0039647.1.mrna1;Target=FBgn0039647.1 1271 1434 +
Chr2	gffcl	locus	157863736	157865805	.	-	.	ID=RLOC_00023191;geneIDs=comp152568_c0_seq1.path1;transcripts=comp152568_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157863736	157865805	.	-	.	ID=comp152568_c0_seq1.mrna1;geneID=comp152568_c0_seq1.path1;Name=comp152568_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=2038;mismatches=14;indels=20;unknowns=0;Target=comp152568_c0_seq1 2054 1 .;CDS_Target=comp152568_c0_seq1 1903 1601 .;locus=RLOC_00023191
Chr2	stalkie_big_nohaplotig	exon	157863736	157865805	98	-	.	Parent=comp152568_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157863887	157864189	.	-	0	Parent=comp152568_c0_seq1.mrna1
Chr2	gffcl	locus	157869567	157871867	.	+	.	ID=RLOC_00023192;geneIDs=comp149006_c0_seq1.path1,comp156922_c0_seq1.path1;transcripts=comp156922_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157869567	157870971	.	+	.	ID=comp156922_c0_seq1.mrna1;geneID=comp156922_c0_seq1.path1;Name=comp156922_c0_seq1;Dir=indeterminatecoverage=99.9;identity=97.8;matches=1375;mismatches=20;indels=11;unknowns=0;Target=comp156922_c0_seq1 1396 1 .;CDS_Target=comp156922_c0_seq1 238 137 .;locus=RLOC_00023192
Chr2	stalkie_big_nohaplotig	exon	157869567	157870971	97	+	.	Parent=comp156922_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157869703	157869804	.	+	0	Parent=comp156922_c0_seq1.mrna1
Chr2	gffcl	locus	157886300	157890704	.	-	.	ID=RLOC_00023193;geneIDs=FBgn0039644.1.path1;transcripts=FBgn0039644.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157886300	157890704	.	-	.	ID=FBgn0039644.1.mrna1;geneID=FBgn0039644.1.path1;Name=FBgn0039644.1;Dir=sensecoverage=100.0;identity=100.0;matches=3996;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023193
Chr2	stalkie_big_nohaplotig	exon	157886300	157886591	100	-	.	Parent=FBgn0039644.1.mrna1;Target=FBgn0039644.1 3705 3996 +
Chr2	stalkie_big_nohaplotig	exon	157886660	157887608	100	-	.	Parent=FBgn0039644.1.mrna1;Target=FBgn0039644.1 2756 3704 +
Chr2	stalkie_big_nohaplotig	exon	157887665	157887815	100	-	.	Parent=FBgn0039644.1.mrna1;Target=FBgn0039644.1 2605 2755 +
Chr2	stalkie_big_nohaplotig	exon	157887969	157888416	100	-	.	Parent=FBgn0039644.1.mrna1;Target=FBgn0039644.1 2157 2604 +
Chr2	stalkie_big_nohaplotig	exon	157888481	157890490	100	-	.	Parent=FBgn0039644.1.mrna1;Target=FBgn0039644.1 147 2156 +
Chr2	stalkie_big_nohaplotig	exon	157890559	157890704	100	-	.	Parent=FBgn0039644.1.mrna1;Target=FBgn0039644.1 1 146 +
Chr2	stalkie_big_nohaplotig	CDS	157886300	157886591	.	-	1	Parent=FBgn0039644.1.mrna1;Target=FBgn0039644.1 3705 3996 +
Chr2	stalkie_big_nohaplotig	CDS	157886660	157887608	.	-	2	Parent=FBgn0039644.1.mrna1;Target=FBgn0039644.1 2756 3704 +
Chr2	stalkie_big_nohaplotig	CDS	157887665	157887815	.	-	0	Parent=FBgn0039644.1.mrna1;Target=FBgn0039644.1 2605 2755 +
Chr2	stalkie_big_nohaplotig	CDS	157887969	157888416	.	-	1	Parent=FBgn0039644.1.mrna1;Target=FBgn0039644.1 2157 2604 +
Chr2	stalkie_big_nohaplotig	CDS	157888481	157890490	.	-	1	Parent=FBgn0039644.1.mrna1;Target=FBgn0039644.1 147 2156 +
Chr2	stalkie_big_nohaplotig	CDS	157890559	157890704	.	-	0	Parent=FBgn0039644.1.mrna1;Target=FBgn0039644.1 1 146 +
Chr2	gffcl	locus	157894717	157895003	.	+	.	ID=RLOC_00023194;geneIDs=comp197684_c0_seq1.path1;transcripts=comp197684_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157894717	157895003	.	+	.	ID=comp197684_c0_seq1.mrna1;geneID=comp197684_c0_seq1.path1;Name=comp197684_c0_seq1;Dir=indeterminatecoverage=82.0;identity=100.0;matches=287;mismatches=0;indels=0;unknowns=0;Target=comp197684_c0_seq1 343 57 .;CDS_Target=comp197684_c0_seq1 343 161 .;locus=RLOC_00023194
Chr2	stalkie_big_nohaplotig	exon	157894717	157895003	100	+	.	Parent=comp197684_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157894821	157895003	.	+	0	Parent=comp197684_c0_seq1.mrna1
Chr2	gffcl	locus	157896745	157898404	.	+	.	ID=RLOC_00023195;geneIDs=FBgn0039219.1.path1;transcripts=FBgn0039219.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157896745	157898404	.	+	.	ID=FBgn0039219.1.mrna1;geneID=FBgn0039219.1.path1;Name=FBgn0039219.1;Dir=sensecoverage=100.0;identity=100.0;matches=1224;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023195
Chr2	stalkie_big_nohaplotig	exon	157896745	157896771	100	+	.	Parent=FBgn0039219.1.mrna1;Target=FBgn0039219.1 1 27 +
Chr2	stalkie_big_nohaplotig	exon	157896984	157897209	100	+	.	Parent=FBgn0039219.1.mrna1;Target=FBgn0039219.1 28 253 +
Chr2	stalkie_big_nohaplotig	exon	157897266	157897578	100	+	.	Parent=FBgn0039219.1.mrna1;Target=FBgn0039219.1 254 566 +
Chr2	stalkie_big_nohaplotig	exon	157897633	157897920	100	+	.	Parent=FBgn0039219.1.mrna1;Target=FBgn0039219.1 567 854 +
Chr2	stalkie_big_nohaplotig	exon	157897980	157898119	100	+	.	Parent=FBgn0039219.1.mrna1;Target=FBgn0039219.1 855 994 +
Chr2	stalkie_big_nohaplotig	exon	157898175	157898404	100	+	.	Parent=FBgn0039219.1.mrna1;Target=FBgn0039219.1 995 1224 +
Chr2	stalkie_big_nohaplotig	CDS	157896745	157896771	.	+	0	Parent=FBgn0039219.1.mrna1;Target=FBgn0039219.1 1 27 +
Chr2	stalkie_big_nohaplotig	CDS	157896984	157897209	.	+	0	Parent=FBgn0039219.1.mrna1;Target=FBgn0039219.1 28 253 +
Chr2	stalkie_big_nohaplotig	CDS	157897266	157897578	.	+	2	Parent=FBgn0039219.1.mrna1;Target=FBgn0039219.1 254 566 +
Chr2	stalkie_big_nohaplotig	CDS	157897633	157897920	.	+	1	Parent=FBgn0039219.1.mrna1;Target=FBgn0039219.1 567 854 +
Chr2	stalkie_big_nohaplotig	CDS	157897980	157898119	.	+	1	Parent=FBgn0039219.1.mrna1;Target=FBgn0039219.1 855 994 +
Chr2	stalkie_big_nohaplotig	CDS	157898175	157898404	.	+	2	Parent=FBgn0039219.1.mrna1;Target=FBgn0039219.1 995 1224 +
Chr2	gffcl	locus	157898560	157898883	.	-	.	ID=RLOC_00023196;geneIDs=FBgn0039218.1.path1;transcripts=FBgn0039218.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157898560	157898883	.	-	.	ID=FBgn0039218.1.mrna1;geneID=FBgn0039218.1.path1;Name=FBgn0039218.1;Dir=sensecoverage=100.0;identity=100.0;matches=273;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023196
Chr2	stalkie_big_nohaplotig	exon	157898560	157898665	100	-	.	Parent=FBgn0039218.1.mrna1;Target=FBgn0039218.1 168 273 +
Chr2	stalkie_big_nohaplotig	exon	157898717	157898883	100	-	.	Parent=FBgn0039218.1.mrna1;Target=FBgn0039218.1 1 167 +
Chr2	stalkie_big_nohaplotig	CDS	157898560	157898665	.	-	1	Parent=FBgn0039218.1.mrna1;Target=FBgn0039218.1 168 273 +
Chr2	stalkie_big_nohaplotig	CDS	157898717	157898883	.	-	0	Parent=FBgn0039218.1.mrna1;Target=FBgn0039218.1 1 167 +
Chr2	gffcl	locus	157902090	157903302	.	+	.	ID=RLOC_00023197;geneIDs=FBgn0014869.1.path1;transcripts=FBgn0014869.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157902090	157903302	.	+	.	ID=FBgn0014869.1.mrna1;geneID=FBgn0014869.1.path1;Name=FBgn0014869.1;Dir=sensecoverage=100.0;identity=99.9;matches=953;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023197
Chr2	stalkie_big_nohaplotig	exon	157902090	157902179	100	+	.	Parent=FBgn0014869.1.mrna1;Target=FBgn0014869.1 1 90 +
Chr2	stalkie_big_nohaplotig	exon	157902318	157902519	99	+	.	Parent=FBgn0014869.1.mrna1;Target=FBgn0014869.1 91 292 +
Chr2	stalkie_big_nohaplotig	exon	157902582	157903079	100	+	.	Parent=FBgn0014869.1.mrna1;Target=FBgn0014869.1 293 790 +
Chr2	stalkie_big_nohaplotig	exon	157903139	157903302	100	+	.	Parent=FBgn0014869.1.mrna1;Target=FBgn0014869.1 791 954 +
Chr2	stalkie_big_nohaplotig	CDS	157902090	157902179	.	+	0	Parent=FBgn0014869.1.mrna1;Target=FBgn0014869.1 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	157902318	157902519	.	+	0	Parent=FBgn0014869.1.mrna1;Target=FBgn0014869.1 91 292 +
Chr2	stalkie_big_nohaplotig	CDS	157902582	157903079	.	+	2	Parent=FBgn0014869.1.mrna1;Target=FBgn0014869.1 293 790 +
Chr2	stalkie_big_nohaplotig	CDS	157903139	157903302	.	+	2	Parent=FBgn0014869.1.mrna1;Target=FBgn0014869.1 791 954 +
Chr2	gffcl	locus	157903713	157905561	.	-	.	ID=RLOC_00023198;geneIDs=FBgn0041588.1.path1;transcripts=FBgn0041588.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157903713	157905561	.	-	.	ID=FBgn0041588.1.mrna1;geneID=FBgn0041588.1.path1;Name=FBgn0041588.1;Dir=sensecoverage=100.0;identity=99.6;matches=1786;mismatches=8;indels=0;unknowns=0;locus=RLOC_00023198
Chr2	stalkie_big_nohaplotig	exon	157903713	157904950	99	-	.	Parent=FBgn0041588.1.mrna1;Target=FBgn0041588.1 557 1794 +
Chr2	stalkie_big_nohaplotig	exon	157905006	157905561	99	-	.	Parent=FBgn0041588.1.mrna1;Target=FBgn0041588.1 1 556 +
Chr2	stalkie_big_nohaplotig	CDS	157903713	157904950	.	-	2	Parent=FBgn0041588.1.mrna1;Target=FBgn0041588.1 557 1794 +
Chr2	stalkie_big_nohaplotig	CDS	157905006	157905561	.	-	0	Parent=FBgn0041588.1.mrna1;Target=FBgn0041588.1 1 556 +
Chr2	gffcl	locus	157930147	157930728	.	+	.	ID=RLOC_00023200;geneIDs=FBgn0039639.1.path1;transcripts=FBgn0039639.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157930147	157930728	.	+	.	ID=FBgn0039639.1.mrna1;geneID=FBgn0039639.1.path1;Name=FBgn0039639.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=582;mismatches=0;indels=0;unknowns=0;Target=FBgn0039639.1 582 1 .;locus=RLOC_00023200
Chr2	stalkie_big_nohaplotig	exon	157930147	157930728	100	+	.	Parent=FBgn0039639.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157930147	157930728	.	+	0	Parent=FBgn0039639.1.mrna1
Chr2	gffcl	locus	157931952	157936034	.	-	.	ID=RLOC_00023201;geneIDs=FBgn0028671.1.path1,comp118586_c0_seq1.path1;transcripts=FBgn0028671.1.mrna1,comp118586_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157931952	157936034	.	-	.	ID=FBgn0028671.1.mrna1;geneID=FBgn0028671.1.path1;Name=FBgn0028671.1;Dir=sensecoverage=100.0;identity=99.9;matches=2143;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023201
Chr2	stalkie_big_nohaplotig	exon	157931952	157932060	100	-	.	Parent=FBgn0028671.1.mrna1;Target=FBgn0028671.1 2037 2145 +
Chr2	stalkie_big_nohaplotig	exon	157932126	157932297	100	-	.	Parent=FBgn0028671.1.mrna1;Target=FBgn0028671.1 1865 2036 +
Chr2	stalkie_big_nohaplotig	exon	157932365	157932584	99	-	.	Parent=FBgn0028671.1.mrna1;Target=FBgn0028671.1 1645 1864 +
Chr2	stalkie_big_nohaplotig	exon	157932909	157933126	100	-	.	Parent=FBgn0028671.1.mrna1;Target=FBgn0028671.1 1427 1644 +
Chr2	stalkie_big_nohaplotig	exon	157933180	157934338	100	-	.	Parent=FBgn0028671.1.mrna1;Target=FBgn0028671.1 268 1426 +
Chr2	stalkie_big_nohaplotig	exon	157934404	157934530	100	-	.	Parent=FBgn0028671.1.mrna1;Target=FBgn0028671.1 141 267 +
Chr2	stalkie_big_nohaplotig	exon	157934862	157934903	100	-	.	Parent=FBgn0028671.1.mrna1;Target=FBgn0028671.1 99 140 +
Chr2	stalkie_big_nohaplotig	exon	157935937	157936034	100	-	.	Parent=FBgn0028671.1.mrna1;Target=FBgn0028671.1 1 98 +
Chr2	stalkie_big_nohaplotig	CDS	157931952	157932060	.	-	1	Parent=FBgn0028671.1.mrna1;Target=FBgn0028671.1 2037 2145 +
Chr2	stalkie_big_nohaplotig	CDS	157932126	157932297	.	-	2	Parent=FBgn0028671.1.mrna1;Target=FBgn0028671.1 1865 2036 +
Chr2	stalkie_big_nohaplotig	CDS	157932365	157932584	.	-	0	Parent=FBgn0028671.1.mrna1;Target=FBgn0028671.1 1645 1864 +
Chr2	stalkie_big_nohaplotig	CDS	157932909	157933126	.	-	2	Parent=FBgn0028671.1.mrna1;Target=FBgn0028671.1 1427 1644 +
Chr2	stalkie_big_nohaplotig	CDS	157933180	157934338	.	-	0	Parent=FBgn0028671.1.mrna1;Target=FBgn0028671.1 268 1426 +
Chr2	stalkie_big_nohaplotig	CDS	157934404	157934530	.	-	1	Parent=FBgn0028671.1.mrna1;Target=FBgn0028671.1 141 267 +
Chr2	stalkie_big_nohaplotig	CDS	157934862	157934903	.	-	1	Parent=FBgn0028671.1.mrna1;Target=FBgn0028671.1 99 140 +
Chr2	stalkie_big_nohaplotig	CDS	157935937	157936034	.	-	0	Parent=FBgn0028671.1.mrna1;Target=FBgn0028671.1 1 98 +
Chr2	stalkie_big_nohaplotig	mRNA	157932557	157932929	.	-	.	ID=comp118586_c0_seq1.mrna1;geneID=comp118586_c0_seq1.path1;Name=comp118586_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=373;mismatches=0;indels=0;unknowns=0;Target=comp118586_c0_seq1 373 1 .;CDS_Target=comp118586_c0_seq1 373 278 .;locus=RLOC_00023201
Chr2	stalkie_big_nohaplotig	exon	157932557	157932929	100	-	.	Parent=comp118586_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157932557	157932652	.	-	0	Parent=comp118586_c0_seq1.mrna1
Chr2	gffcl	locus	157937047	157937310	.	+	.	ID=RLOC_00023202;geneIDs=comp134730_c0_seq1.path1;transcripts=comp134730_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157937047	157937310	.	+	.	ID=comp134730_c0_seq1.mrna1;geneID=comp134730_c0_seq1.path1;Name=comp134730_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=264;mismatches=0;indels=0;unknowns=0;Target=comp134730_c0_seq1 264 1 .;CDS_Target=comp134730_c0_seq1 99 10 .;locus=RLOC_00023202
Chr2	stalkie_big_nohaplotig	exon	157937047	157937310	100	+	.	Parent=comp134730_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157937056	157937145	.	+	0	Parent=comp134730_c0_seq1.mrna1
Chr2	gffcl	locus	157938211	157938596	.	-	.	ID=RLOC_00023203;geneIDs=comp285570_c0_seq1.path1;transcripts=comp285570_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157938211	157938596	.	-	.	ID=comp285570_c0_seq1.mrna1;geneID=comp285570_c0_seq1.path1;Name=comp285570_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=386;mismatches=0;indels=0;unknowns=0;Target=comp285570_c0_seq1 386 1 .;CDS_Target=comp285570_c0_seq1 343 227 .;locus=RLOC_00023203
Chr2	stalkie_big_nohaplotig	exon	157938211	157938596	100	-	.	Parent=comp285570_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157938254	157938370	.	-	0	Parent=comp285570_c0_seq1.mrna1
Chr2	gffcl	locus	157944578	157945247	.	+	.	ID=RLOC_00023204;geneIDs=comp149904_c0_seq1.path1;transcripts=comp149904_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157944578	157945247	.	+	.	ID=comp149904_c0_seq1.mrna1;geneID=comp149904_c0_seq1.path1;Name=comp149904_c0_seq1;Dir=indeterminatecoverage=84.7;identity=100.0;matches=670;mismatches=0;indels=0;unknowns=0;Target=comp149904_c0_seq1 670 1 .;CDS_Target=comp149904_c0_seq1 634 560 .;locus=RLOC_00023204
Chr2	stalkie_big_nohaplotig	exon	157944578	157945247	100	+	.	Parent=comp149904_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157945137	157945211	.	+	0	Parent=comp149904_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157945452	159522963	.	-	.	ID=comp135173_c0_seq1.mrna1;geneID=comp135173_c0_seq1.path1;Name=comp135173_c0_seq1;Dir=indeterminatecoverage=87.3;identity=99.7;matches=571;mismatches=2;indels=0;unknowns=0;Target=comp135173_c0_seq1 214 113 .;locus=RLOC_00023205
Chr2	stalkie_big_nohaplotig	exon	157945452	157945455	100	-	.	Parent=comp135173_c0_seq1.mrna1;Target=comp135173_c0_seq1 573 570 .
Chr2	stalkie_big_nohaplotig	exon	157955932	157955936	100	-	.	Parent=comp135173_c0_seq1.mrna1;Target=comp135173_c0_seq1 569 565 .
Chr2	stalkie_big_nohaplotig	exon	157962652	157962655	100	-	.	Parent=comp135173_c0_seq1.mrna1;Target=comp135173_c0_seq1 564 561 .
Chr2	stalkie_big_nohaplotig	exon	157967600	157967601	100	-	.	Parent=comp135173_c0_seq1.mrna1;Target=comp135173_c0_seq1 560 559 .
Chr2	stalkie_big_nohaplotig	exon	157967960	157967962	100	-	.	Parent=comp135173_c0_seq1.mrna1;Target=comp135173_c0_seq1 558 556 .
Chr2	stalkie_big_nohaplotig	exon	157969232	157969241	100	-	.	Parent=comp135173_c0_seq1.mrna1;Target=comp135173_c0_seq1 555 546 .
Chr2	stalkie_big_nohaplotig	exon	157976869	157976872	100	-	.	Parent=comp135173_c0_seq1.mrna1;Target=comp135173_c0_seq1 545 542 .
Chr2	stalkie_big_nohaplotig	exon	157981574	157981575	100	-	.	Parent=comp135173_c0_seq1.mrna1;Target=comp135173_c0_seq1 541 540 .
Chr2	stalkie_big_nohaplotig	exon	159522425	159522963	99	-	.	Parent=comp135173_c0_seq1.mrna1;Target=comp135173_c0_seq1 539 1 .
Chr2	stalkie_big_nohaplotig	CDS	159522750	159522851	.	-	0	Parent=comp135173_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157961517	157963013	.	-	.	ID=FBgn0020018.1.mrna1;geneID=FBgn0020018.1.path1;Name=FBgn0020018.1;Dir=sensecoverage=99.4;identity=99.8;matches=1437;mismatches=3;indels=0;unknowns=0;locus=RLOC_00023205
Chr2	stalkie_big_nohaplotig	exon	157961517	157962472	99	-	.	Parent=FBgn0020018.1.mrna1;Target=FBgn0020018.1 494 1449 +
Chr2	stalkie_big_nohaplotig	exon	157962530	157963013	100	-	.	Parent=FBgn0020018.1.mrna1;Target=FBgn0020018.1 10 493 +
Chr2	stalkie_big_nohaplotig	CDS	157961517	157962472	.	-	2	Parent=FBgn0020018.1.mrna1;Target=FBgn0020018.1 494 1449 +
Chr2	stalkie_big_nohaplotig	CDS	157962530	157963013	.	-	0	Parent=FBgn0020018.1.mrna1;Target=FBgn0020018.1 10 493 +
Chr2	gffcl	locus	157960965	157961447	.	+	.	ID=RLOC_00023206;geneIDs=FBgn0051126.1.path1;transcripts=FBgn0051126.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157960965	157961447	.	+	.	ID=FBgn0051126.1.mrna1;geneID=FBgn0051126.1.path1;Name=FBgn0051126.1;Dir=sensecoverage=100.0;identity=99.5;matches=373;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023206
Chr2	stalkie_big_nohaplotig	exon	157960965	157960989	96	+	.	Parent=FBgn0051126.1.mrna1;Target=FBgn0051126.1 1 25 +
Chr2	stalkie_big_nohaplotig	exon	157961042	157961244	99	+	.	Parent=FBgn0051126.1.mrna1;Target=FBgn0051126.1 26 228 +
Chr2	stalkie_big_nohaplotig	exon	157961301	157961447	100	+	.	Parent=FBgn0051126.1.mrna1;Target=FBgn0051126.1 229 375 +
Chr2	stalkie_big_nohaplotig	CDS	157960965	157960989	.	+	0	Parent=FBgn0051126.1.mrna1;Target=FBgn0051126.1 1 25 +
Chr2	stalkie_big_nohaplotig	CDS	157961042	157961244	.	+	2	Parent=FBgn0051126.1.mrna1;Target=FBgn0051126.1 26 228 +
Chr2	stalkie_big_nohaplotig	CDS	157961301	157961447	.	+	0	Parent=FBgn0051126.1.mrna1;Target=FBgn0051126.1 229 375 +
Chr2	gffcl	locus	157992151	157992713	.	-	.	ID=RLOC_00023207;geneIDs=comp1425681_c0_seq1.path1;transcripts=comp1425681_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	157992151	157992713	.	-	.	ID=comp1425681_c0_seq1.mrna1;geneID=comp1425681_c0_seq1.path1;Name=comp1425681_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=560;mismatches=3;indels=0;unknowns=0;Target=comp1425681_c0_seq1 563 1 .;CDS_Target=comp1425681_c0_seq1 482 396 .;locus=RLOC_00023207
Chr2	stalkie_big_nohaplotig	exon	157992151	157992713	99	-	.	Parent=comp1425681_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	157992232	157992318	.	-	0	Parent=comp1425681_c0_seq1.mrna1
Chr2	gffcl	locus	158020052	158020464	.	+	.	ID=RLOC_00023208;geneIDs=comp117173_c0_seq1.path1;transcripts=comp117173_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158020052	158020464	.	+	.	ID=comp117173_c0_seq1.mrna1;geneID=comp117173_c0_seq1.path1;Name=comp117173_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=412;mismatches=1;indels=0;unknowns=0;Target=comp117173_c0_seq1 413 1 .;CDS_Target=comp117173_c0_seq1 296 207 .;locus=RLOC_00023208
Chr2	stalkie_big_nohaplotig	exon	158020052	158020464	99	+	.	Parent=comp117173_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158020258	158020347	.	+	0	Parent=comp117173_c0_seq1.mrna1
Chr2	gffcl	locus	158023588	158042048	.	+	.	ID=RLOC_00023209;geneIDs=FBgn0003429.path1,comp159798_c5_seq1.path1,comp791851_c0_seq1.path1;transcripts=FBgn0003429.mrna1,comp159798_c5_seq1.mrna1,comp791851_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158023588	158039183	.	+	.	ID=FBgn0003429.mrna1;geneID=FBgn0003429.path1;Name=FBgn0003429;Dir=sensecoverage=100.0;identity=99.9;matches=1580;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023209
Chr2	stalkie_big_nohaplotig	exon	158023588	158023657	100	+	.	Parent=FBgn0003429.mrna1;Target=FBgn0003429 1 70 +
Chr2	stalkie_big_nohaplotig	exon	158031987	158032019	100	+	.	Parent=FBgn0003429.mrna1;Target=FBgn0003429 71 103 +
Chr2	stalkie_big_nohaplotig	exon	158033529	158033685	100	+	.	Parent=FBgn0003429.mrna1;Target=FBgn0003429 104 260 +
Chr2	stalkie_big_nohaplotig	exon	158037040	158037217	100	+	.	Parent=FBgn0003429.mrna1;Target=FBgn0003429 261 438 +
Chr2	stalkie_big_nohaplotig	exon	158037289	158037796	100	+	.	Parent=FBgn0003429.mrna1;Target=FBgn0003429 439 946 +
Chr2	stalkie_big_nohaplotig	exon	158038240	158038376	99	+	.	Parent=FBgn0003429.mrna1;Target=FBgn0003429 947 1083 +
Chr2	stalkie_big_nohaplotig	exon	158038548	158038690	100	+	.	Parent=FBgn0003429.mrna1;Target=FBgn0003429 1084 1226 +
Chr2	stalkie_big_nohaplotig	exon	158038757	158038976	100	+	.	Parent=FBgn0003429.mrna1;Target=FBgn0003429 1227 1446 +
Chr2	stalkie_big_nohaplotig	exon	158039049	158039183	100	+	.	Parent=FBgn0003429.mrna1;Target=FBgn0003429 1447 1581 +
Chr2	stalkie_big_nohaplotig	CDS	158023588	158023657	.	+	0	Parent=FBgn0003429.mrna1;Target=FBgn0003429 1 70 +
Chr2	stalkie_big_nohaplotig	CDS	158031987	158032019	.	+	2	Parent=FBgn0003429.mrna1;Target=FBgn0003429 71 103 +
Chr2	stalkie_big_nohaplotig	CDS	158033529	158033685	.	+	2	Parent=FBgn0003429.mrna1;Target=FBgn0003429 104 260 +
Chr2	stalkie_big_nohaplotig	CDS	158037040	158037217	.	+	1	Parent=FBgn0003429.mrna1;Target=FBgn0003429 261 438 +
Chr2	stalkie_big_nohaplotig	CDS	158037289	158037796	.	+	0	Parent=FBgn0003429.mrna1;Target=FBgn0003429 439 946 +
Chr2	stalkie_big_nohaplotig	CDS	158038240	158038376	.	+	2	Parent=FBgn0003429.mrna1;Target=FBgn0003429 947 1083 +
Chr2	stalkie_big_nohaplotig	CDS	158038548	158038690	.	+	0	Parent=FBgn0003429.mrna1;Target=FBgn0003429 1084 1226 +
Chr2	stalkie_big_nohaplotig	CDS	158038757	158038976	.	+	1	Parent=FBgn0003429.mrna1;Target=FBgn0003429 1227 1446 +
Chr2	stalkie_big_nohaplotig	CDS	158039049	158039183	.	+	0	Parent=FBgn0003429.mrna1;Target=FBgn0003429 1447 1581 +
Chr2	stalkie_big_nohaplotig	mRNA	158031495	158042048	.	+	.	ID=comp159798_c5_seq1.mrna1;geneID=comp159798_c5_seq1.path1;Name=comp159798_c5_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=4866;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023209
Chr2	stalkie_big_nohaplotig	exon	158031495	158032019	99	+	.	Parent=comp159798_c5_seq1.mrna1;Target=comp159798_c5_seq1 4344 4868 -
Chr2	stalkie_big_nohaplotig	exon	158033529	158033685	100	+	.	Parent=comp159798_c5_seq1.mrna1;Target=comp159798_c5_seq1 4187 4343 -
Chr2	stalkie_big_nohaplotig	exon	158037040	158037217	100	+	.	Parent=comp159798_c5_seq1.mrna1;Target=comp159798_c5_seq1 4009 4186 -
Chr2	stalkie_big_nohaplotig	exon	158037289	158037796	100	+	.	Parent=comp159798_c5_seq1.mrna1;Target=comp159798_c5_seq1 3501 4008 -
Chr2	stalkie_big_nohaplotig	exon	158038240	158038376	99	+	.	Parent=comp159798_c5_seq1.mrna1;Target=comp159798_c5_seq1 3364 3500 -
Chr2	stalkie_big_nohaplotig	exon	158038548	158038690	100	+	.	Parent=comp159798_c5_seq1.mrna1;Target=comp159798_c5_seq1 3221 3363 -
Chr2	stalkie_big_nohaplotig	exon	158038757	158038976	100	+	.	Parent=comp159798_c5_seq1.mrna1;Target=comp159798_c5_seq1 3001 3220 -
Chr2	stalkie_big_nohaplotig	exon	158039049	158042048	100	+	.	Parent=comp159798_c5_seq1.mrna1;Target=comp159798_c5_seq1 1 3000 -
Chr2	stalkie_big_nohaplotig	CDS	158032013	158032019	.	+	0	Parent=comp159798_c5_seq1.mrna1;Target=comp159798_c5_seq1 4344 4350 .
Chr2	stalkie_big_nohaplotig	CDS	158033529	158033685	.	+	2	Parent=comp159798_c5_seq1.mrna1;Target=comp159798_c5_seq1 4187 4343 .
Chr2	stalkie_big_nohaplotig	CDS	158037040	158037217	.	+	1	Parent=comp159798_c5_seq1.mrna1;Target=comp159798_c5_seq1 4009 4186 .
Chr2	stalkie_big_nohaplotig	CDS	158037289	158037796	.	+	0	Parent=comp159798_c5_seq1.mrna1;Target=comp159798_c5_seq1 3501 4008 .
Chr2	stalkie_big_nohaplotig	CDS	158038240	158038376	.	+	2	Parent=comp159798_c5_seq1.mrna1;Target=comp159798_c5_seq1 3364 3500 .
Chr2	stalkie_big_nohaplotig	CDS	158038548	158038690	.	+	0	Parent=comp159798_c5_seq1.mrna1;Target=comp159798_c5_seq1 3221 3363 .
Chr2	stalkie_big_nohaplotig	CDS	158038757	158038976	.	+	1	Parent=comp159798_c5_seq1.mrna1;Target=comp159798_c5_seq1 3001 3220 .
Chr2	stalkie_big_nohaplotig	CDS	158039049	158039186	.	+	0	Parent=comp159798_c5_seq1.mrna1;Target=comp159798_c5_seq1 2863 3000 .
Chr2	stalkie_big_nohaplotig	mRNA	158033297	158033552	.	+	.	ID=comp791851_c0_seq1.mrna1;geneID=comp791851_c0_seq1.path1;Name=comp791851_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=255;mismatches=1;indels=1;unknowns=0;Target=comp791851_c0_seq1 257 1 .;CDS_Target=comp791851_c0_seq1 55 2 .;locus=RLOC_00023209
Chr2	stalkie_big_nohaplotig	exon	158033297	158033552	99	+	.	Parent=comp791851_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158033298	158033350	.	+	0	Parent=comp791851_c0_seq1.mrna1
Chr2	gffcl	locus	158025142	158028362	.	+	.	ID=RLOC_00023210;geneIDs=comp159910_c0_seq1.path1;transcripts=comp159910_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158025142	158028362	.	+	.	ID=comp159910_c0_seq1.mrna1;geneID=comp159910_c0_seq1.path1;Name=comp159910_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=3209;mismatches=7;indels=6;unknowns=0;Target=comp159910_c0_seq1 3217 1 .;CDS_Target=comp159910_c0_seq1 757 596 .;locus=RLOC_00023210
Chr2	stalkie_big_nohaplotig	exon	158025142	158028362	99	+	.	Parent=comp159910_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158025736	158025897	.	+	0	Parent=comp159910_c0_seq1.mrna1
Chr2	gffcl	locus	158028466	158116764	.	-	.	ID=RLOC_00023211;geneIDs=FBgn0028692.1.path1,comp159893_c0_seq1.path1;transcripts=comp159893_c0_seq1.mrna1,FBgn0028692.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158028466	158116764	.	-	.	ID=comp159893_c0_seq1.mrna1;geneID=comp159893_c0_seq1.path1;Name=comp159893_c0_seq1;Dir=indeterminatecoverage=61.0;identity=97.5;matches=2025;mismatches=35;indels=16;unknowns=0;Target=comp159893_c0_seq1 2578 2336 .;locus=RLOC_00023211
Chr2	stalkie_big_nohaplotig	exon	158028466	158030373	99	-	.	Parent=comp159893_c0_seq1.mrna1;Target=comp159893_c0_seq1 3477 1570 .
Chr2	stalkie_big_nohaplotig	exon	158030968	158030992	76	-	.	Parent=comp159893_c0_seq1.mrna1;Target=comp159893_c0_seq1 1552 1529 .
Chr2	stalkie_big_nohaplotig	exon	158059478	158059481	100	-	.	Parent=comp159893_c0_seq1.mrna1;Target=comp159893_c0_seq1 1528 1525 .
Chr2	stalkie_big_nohaplotig	exon	158061098	158061099	100	-	.	Parent=comp159893_c0_seq1.mrna1;Target=comp159893_c0_seq1 1524 1523 .
Chr2	stalkie_big_nohaplotig	exon	158063801	158063808	100	-	.	Parent=comp159893_c0_seq1.mrna1;Target=comp159893_c0_seq1 1522 1515 .
Chr2	stalkie_big_nohaplotig	exon	158067769	158067806	63	-	.	Parent=comp159893_c0_seq1.mrna1;Target=comp159893_c0_seq1 1514 1483 .
Chr2	stalkie_big_nohaplotig	exon	158083836	158083844	100	-	.	Parent=comp159893_c0_seq1.mrna1;Target=comp159893_c0_seq1 1482 1474 .
Chr2	stalkie_big_nohaplotig	exon	158088071	158088072	100	-	.	Parent=comp159893_c0_seq1.mrna1;Target=comp159893_c0_seq1 1473 1472 .
Chr2	stalkie_big_nohaplotig	exon	158098640	158098684	56	-	.	Parent=comp159893_c0_seq1.mrna1;Target=comp159893_c0_seq1 1444 1392 .
Chr2	stalkie_big_nohaplotig	exon	158113170	158113184	86	-	.	Parent=comp159893_c0_seq1.mrna1;Target=comp159893_c0_seq1 1391 1378 .
Chr2	stalkie_big_nohaplotig	exon	158116756	158116764	100	-	.	Parent=comp159893_c0_seq1.mrna1;Target=comp159893_c0_seq1 1364 1356 .
Chr2	stalkie_big_nohaplotig	CDS	158029365	158029607	.	-	0	Parent=comp159893_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158062269	158065053	.	-	.	ID=FBgn0028692.1.mrna1;geneID=FBgn0028692.1.path1;Name=FBgn0028692.1;Dir=sensecoverage=100.0;identity=100.0;matches=2606;mismatches=0;indels=1;unknowns=0;locus=RLOC_00023211
Chr2	stalkie_big_nohaplotig	exon	158062269	158062587	99	-	.	Parent=FBgn0028692.1.mrna1;Target=FBgn0028692.1 2288 2607 +
Chr2	stalkie_big_nohaplotig	exon	158062648	158063955	100	-	.	Parent=FBgn0028692.1.mrna1;Target=FBgn0028692.1 980 2287 +
Chr2	stalkie_big_nohaplotig	exon	158064015	158064973	100	-	.	Parent=FBgn0028692.1.mrna1;Target=FBgn0028692.1 21 979 +
Chr2	stalkie_big_nohaplotig	exon	158065034	158065053	100	-	.	Parent=FBgn0028692.1.mrna1;Target=FBgn0028692.1 1 20 +
Chr2	stalkie_big_nohaplotig	CDS	158062269	158062587	.	-	2	Parent=FBgn0028692.1.mrna1;Target=FBgn0028692.1 2288 2607 +
Chr2	stalkie_big_nohaplotig	CDS	158062648	158063955	.	-	2	Parent=FBgn0028692.1.mrna1;Target=FBgn0028692.1 980 2287 +
Chr2	stalkie_big_nohaplotig	CDS	158064015	158064973	.	-	1	Parent=FBgn0028692.1.mrna1;Target=FBgn0028692.1 21 979 +
Chr2	stalkie_big_nohaplotig	CDS	158065034	158065053	.	-	0	Parent=FBgn0028692.1.mrna1;Target=FBgn0028692.1 1 20 +
Chr2	gffcl	locus	158032248	158033204	.	-	.	ID=RLOC_00023212;geneIDs=comp154776_c0_seq1.path1;transcripts=comp154776_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158032248	158033204	.	-	.	ID=comp154776_c0_seq1.mrna1;geneID=comp154776_c0_seq1.path1;Name=comp154776_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=957;mismatches=0;indels=0;unknowns=0;Target=comp154776_c0_seq1 957 1 .;CDS_Target=comp154776_c0_seq1 869 663 .;locus=RLOC_00023212
Chr2	stalkie_big_nohaplotig	exon	158032248	158033204	100	-	.	Parent=comp154776_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158032336	158032542	.	-	0	Parent=comp154776_c0_seq1.mrna1
Chr2	gffcl	locus	158034681	158035093	.	-	.	ID=RLOC_00023213;geneIDs=comp147428_c2_seq1.path1;transcripts=comp147428_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158034681	158035093	.	-	.	ID=comp147428_c2_seq1.mrna1;geneID=comp147428_c2_seq1.path1;Name=comp147428_c2_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=413;mismatches=0;indels=0;unknowns=0;Target=comp147428_c2_seq1 413 1 .;CDS_Target=comp147428_c2_seq1 298 182 .;locus=RLOC_00023213
Chr2	stalkie_big_nohaplotig	exon	158034681	158035093	100	-	.	Parent=comp147428_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158034796	158034912	.	-	0	Parent=comp147428_c2_seq1.mrna1
Chr2	gffcl	locus	158035842	158037010	.	+	.	ID=RLOC_00023214;geneIDs=comp150000_c0_seq1.path1;transcripts=comp150000_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158035842	158037010	.	+	.	ID=comp150000_c0_seq1.mrna1;geneID=comp150000_c0_seq1.path1;Name=comp150000_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1169;mismatches=0;indels=0;unknowns=0;Target=comp150000_c0_seq1 1169 1 .;CDS_Target=comp150000_c0_seq1 494 381 .;locus=RLOC_00023214
Chr2	stalkie_big_nohaplotig	exon	158035842	158037010	100	+	.	Parent=comp150000_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158036222	158036335	.	+	0	Parent=comp150000_c0_seq1.mrna1
Chr2	gffcl	locus	158042577	158042975	.	+	.	ID=RLOC_00023215;geneIDs=comp463965_c0_seq1.path1;transcripts=comp463965_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158042577	158042975	.	+	.	ID=comp463965_c0_seq1.mrna1;geneID=comp463965_c0_seq1.path1;Name=comp463965_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.2;matches=397;mismatches=2;indels=1;unknowns=0;Target=comp463965_c0_seq1 404 5 .;CDS_Target=comp463965_c0_seq1 145 5 .;locus=RLOC_00023215
Chr2	stalkie_big_nohaplotig	exon	158042577	158042975	99	+	.	Parent=comp463965_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158042577	158042717	.	+	0	Parent=comp463965_c0_seq1.mrna1
Chr2	gffcl	locus	158043222	159060975	.	+	.	ID=RLOC_00023216;geneIDs=comp168380_c0_seq1.path1;transcripts=comp168380_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158043222	159060975	.	+	.	ID=comp168380_c0_seq1.mrna1;geneID=comp168380_c0_seq1.path1;Name=comp168380_c0_seq1;Dir=sensecoverage=95.9;identity=99.6;matches=1937;mismatches=7;indels=1;unknowns=0;Target=comp168380_c0_seq1 154 231 +;locus=RLOC_00023216
Chr2	stalkie_big_nohaplotig	exon	158043222	158044999	100	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 8 1785 +
Chr2	stalkie_big_nohaplotig	exon	158893377	158893384	100	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1786 1793 +
Chr2	stalkie_big_nohaplotig	exon	158928787	158928804	72	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1794 1810 +
Chr2	stalkie_big_nohaplotig	exon	158938655	158938663	100	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1811 1819 +
Chr2	stalkie_big_nohaplotig	exon	158940328	158940332	100	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1820 1824 +
Chr2	stalkie_big_nohaplotig	exon	158941756	158941763	100	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1825 1832 +
Chr2	stalkie_big_nohaplotig	exon	158948546	158948548	100	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1833 1835 +
Chr2	stalkie_big_nohaplotig	exon	158948967	158948974	100	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1836 1843 +
Chr2	stalkie_big_nohaplotig	exon	158957148	158957149	100	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1844 1845 +
Chr2	stalkie_big_nohaplotig	exon	158958493	158958496	100	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1846 1849 +
Chr2	stalkie_big_nohaplotig	exon	158960045	158960047	100	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1850 1852 +
Chr2	stalkie_big_nohaplotig	exon	158960597	158960600	100	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1853 1856 +
Chr2	stalkie_big_nohaplotig	exon	158965639	158965646	100	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1857 1864 +
Chr2	stalkie_big_nohaplotig	exon	158968831	158968832	100	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1865 1866 +
Chr2	stalkie_big_nohaplotig	exon	158975224	158975227	100	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1867 1870 +
Chr2	stalkie_big_nohaplotig	exon	158977772	158977774	100	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1871 1873 +
Chr2	stalkie_big_nohaplotig	exon	158991514	158991519	100	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1874 1879 +
Chr2	stalkie_big_nohaplotig	exon	158998241	158998248	100	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1880 1887 +
Chr2	stalkie_big_nohaplotig	exon	159005006	159005019	85	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1888 1901 +
Chr2	stalkie_big_nohaplotig	exon	159005540	159005551	100	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1902 1913 +
Chr2	stalkie_big_nohaplotig	exon	159006641	159006649	88	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1932 1940 +
Chr2	stalkie_big_nohaplotig	exon	159011017	159011024	100	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1941 1948 +
Chr2	stalkie_big_nohaplotig	exon	159017678	159017683	100	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1949 1954 +
Chr2	stalkie_big_nohaplotig	exon	159021211	159021217	100	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1955 1961 +
Chr2	stalkie_big_nohaplotig	exon	159060969	159060975	100	+	.	Parent=comp168380_c0_seq1.mrna1;Target=comp168380_c0_seq1 1962 1968 +
Chr2	stalkie_big_nohaplotig	CDS	158043368	158043445	.	+	0	Parent=comp168380_c0_seq1.mrna1
Chr2	gffcl	locus	158057341	158058078	.	+	.	ID=RLOC_00023217;geneIDs=FBgn0039642.1.path1;transcripts=FBgn0039642.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158057341	158058078	.	+	.	ID=FBgn0039642.1.mrna1;geneID=FBgn0039642.1.path1;Name=FBgn0039642.1;Dir=sensecoverage=100.0;identity=99.9;matches=686;mismatches=0;indels=1;unknowns=0;locus=RLOC_00023217
Chr2	stalkie_big_nohaplotig	exon	158057341	158057841	100	+	.	Parent=FBgn0039642.1.mrna1;Target=FBgn0039642.1 1 501 +
Chr2	stalkie_big_nohaplotig	exon	158057894	158058078	99	+	.	Parent=FBgn0039642.1.mrna1;Target=FBgn0039642.1 502 687 +
Chr2	stalkie_big_nohaplotig	CDS	158057341	158057841	.	+	0	Parent=FBgn0039642.1.mrna1;Target=FBgn0039642.1 1 501 +
Chr2	stalkie_big_nohaplotig	CDS	158057894	158058078	.	+	0	Parent=FBgn0039642.1.mrna1;Target=FBgn0039642.1 502 687 +
Chr2	gffcl	locus	158058812	158059979	.	-	.	ID=RLOC_00023218;geneIDs=FBgn0041186.1.path1;transcripts=FBgn0041186.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158058812	158059979	.	-	.	ID=FBgn0041186.1.mrna1;geneID=FBgn0041186.1.path1;Name=FBgn0041186.1;Dir=sensecoverage=100.0;identity=100.0;matches=1056;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023218
Chr2	stalkie_big_nohaplotig	exon	158058812	158058986	100	-	.	Parent=FBgn0041186.1.mrna1;Target=FBgn0041186.1 882 1056 +
Chr2	stalkie_big_nohaplotig	exon	158059043	158059464	100	-	.	Parent=FBgn0041186.1.mrna1;Target=FBgn0041186.1 460 881 +
Chr2	stalkie_big_nohaplotig	exon	158059521	158059979	100	-	.	Parent=FBgn0041186.1.mrna1;Target=FBgn0041186.1 1 459 +
Chr2	stalkie_big_nohaplotig	CDS	158058812	158058986	.	-	1	Parent=FBgn0041186.1.mrna1;Target=FBgn0041186.1 882 1056 +
Chr2	stalkie_big_nohaplotig	CDS	158059043	158059464	.	-	0	Parent=FBgn0041186.1.mrna1;Target=FBgn0041186.1 460 881 +
Chr2	stalkie_big_nohaplotig	CDS	158059521	158059979	.	-	0	Parent=FBgn0041186.1.mrna1;Target=FBgn0041186.1 1 459 +
Chr2	gffcl	locus	158066578	158068705	.	+	.	ID=RLOC_00023219;geneIDs=FBgn0037819.2.path1;transcripts=FBgn0037819.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158066578	158068705	.	+	.	ID=FBgn0037819.2.mrna1;geneID=FBgn0037819.2.path1;Name=FBgn0037819.2;Dir=sensecoverage=100.0;identity=100.0;matches=942;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023219
Chr2	stalkie_big_nohaplotig	exon	158066578	158066664	100	+	.	Parent=FBgn0037819.2.mrna1;Target=FBgn0037819.2 1 87 +
Chr2	stalkie_big_nohaplotig	exon	158067789	158068446	100	+	.	Parent=FBgn0037819.2.mrna1;Target=FBgn0037819.2 88 745 +
Chr2	stalkie_big_nohaplotig	exon	158068509	158068705	100	+	.	Parent=FBgn0037819.2.mrna1;Target=FBgn0037819.2 746 942 +
Chr2	stalkie_big_nohaplotig	CDS	158066578	158066664	.	+	0	Parent=FBgn0037819.2.mrna1;Target=FBgn0037819.2 1 87 +
Chr2	stalkie_big_nohaplotig	CDS	158067789	158068446	.	+	0	Parent=FBgn0037819.2.mrna1;Target=FBgn0037819.2 88 745 +
Chr2	stalkie_big_nohaplotig	CDS	158068509	158068705	.	+	2	Parent=FBgn0037819.2.mrna1;Target=FBgn0037819.2 746 942 +
Chr2	gffcl	locus	158070656	158071329	.	-	.	ID=RLOC_00023220;geneIDs=comp142044_c0_seq1.path1;transcripts=comp142044_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158070656	158071329	.	-	.	ID=comp142044_c0_seq1.mrna1;geneID=comp142044_c0_seq1.path1;Name=comp142044_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=672;mismatches=0;indels=2;unknowns=0;Target=comp142044_c0_seq1 672 1 .;CDS_Target=comp142044_c0_seq1 93 1 .;locus=RLOC_00023220
Chr2	stalkie_big_nohaplotig	exon	158070656	158071329	99	-	.	Parent=comp142044_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158071235	158071329	.	-	0	Parent=comp142044_c0_seq1.mrna1
Chr2	gffcl	locus	158073388	158095217	.	-	.	ID=RLOC_00023221;geneIDs=comp159544_c1_seq1.path1;transcripts=comp159544_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158073388	158095217	.	-	.	ID=comp159544_c1_seq1.mrna1;geneID=comp159544_c1_seq1.path1;Name=comp159544_c1_seq1;Dir=indeterminatecoverage=97.0;identity=99.2;matches=1845;mismatches=11;indels=3;unknowns=0;Target=comp159544_c1_seq1 755 468 .;locus=RLOC_00023221
Chr2	stalkie_big_nohaplotig	exon	158073388	158073396	88	-	.	Parent=comp159544_c1_seq1.mrna1;Target=comp159544_c1_seq1 1859 1851 .
Chr2	stalkie_big_nohaplotig	exon	158093370	158095217	99	-	.	Parent=comp159544_c1_seq1.mrna1;Target=comp159544_c1_seq1 1850 2 .
Chr2	stalkie_big_nohaplotig	CDS	158094465	158094750	.	-	0	Parent=comp159544_c1_seq1.mrna1
Chr2	gffcl	locus	158075608	158076350	.	-	.	ID=RLOC_00023222;geneIDs=comp107001_c0_seq1.path1;transcripts=comp107001_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158075608	158076350	.	-	.	ID=comp107001_c0_seq1.mrna1;geneID=comp107001_c0_seq1.path1;Name=comp107001_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=743;mismatches=0;indels=0;unknowns=0;Target=comp107001_c0_seq1 743 1 .;CDS_Target=comp107001_c0_seq1 486 352 .;locus=RLOC_00023222
Chr2	stalkie_big_nohaplotig	exon	158075608	158076350	100	-	.	Parent=comp107001_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158075865	158075999	.	-	0	Parent=comp107001_c0_seq1.mrna1
Chr2	gffcl	locus	158076555	158077586	.	+	.	ID=RLOC_00023223;geneIDs=FBgn0038957.1.path1;transcripts=FBgn0038957.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158076555	158077586	.	+	.	ID=FBgn0038957.1.mrna1;geneID=FBgn0038957.1.path1;Name=FBgn0038957.1;Dir=sensecoverage=100.0;identity=99.7;matches=796;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023223
Chr2	stalkie_big_nohaplotig	exon	158076555	158076693	99	+	.	Parent=FBgn0038957.1.mrna1;Target=FBgn0038957.1 1 139 +
Chr2	stalkie_big_nohaplotig	exon	158076856	158077353	99	+	.	Parent=FBgn0038957.1.mrna1;Target=FBgn0038957.1 140 637 +
Chr2	stalkie_big_nohaplotig	exon	158077426	158077586	100	+	.	Parent=FBgn0038957.1.mrna1;Target=FBgn0038957.1 638 798 +
Chr2	stalkie_big_nohaplotig	CDS	158076555	158076693	.	+	0	Parent=FBgn0038957.1.mrna1;Target=FBgn0038957.1 1 139 +
Chr2	stalkie_big_nohaplotig	CDS	158076856	158077353	.	+	2	Parent=FBgn0038957.1.mrna1;Target=FBgn0038957.1 140 637 +
Chr2	stalkie_big_nohaplotig	CDS	158077426	158077586	.	+	2	Parent=FBgn0038957.1.mrna1;Target=FBgn0038957.1 638 798 +
Chr2	gffcl	locus	158085872	158092742	.	+	.	ID=RLOC_00023224;geneIDs=FBgn0039738.1.path1;transcripts=FBgn0039738.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158085872	158092742	.	+	.	ID=FBgn0039738.1.mrna1;geneID=FBgn0039738.1.path1;Name=FBgn0039738.1;Dir=sensecoverage=100.0;identity=100.0;matches=1452;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023224
Chr2	stalkie_big_nohaplotig	exon	158085872	158085890	100	+	.	Parent=FBgn0039738.1.mrna1;Target=FBgn0039738.1 1 19 +
Chr2	stalkie_big_nohaplotig	exon	158085958	158086089	100	+	.	Parent=FBgn0039738.1.mrna1;Target=FBgn0039738.1 20 151 +
Chr2	stalkie_big_nohaplotig	exon	158086166	158086297	100	+	.	Parent=FBgn0039738.1.mrna1;Target=FBgn0039738.1 152 283 +
Chr2	stalkie_big_nohaplotig	exon	158086365	158086549	100	+	.	Parent=FBgn0039738.1.mrna1;Target=FBgn0039738.1 284 468 +
Chr2	stalkie_big_nohaplotig	exon	158086682	158086834	100	+	.	Parent=FBgn0039738.1.mrna1;Target=FBgn0039738.1 469 621 +
Chr2	stalkie_big_nohaplotig	exon	158086943	158087031	100	+	.	Parent=FBgn0039738.1.mrna1;Target=FBgn0039738.1 622 710 +
Chr2	stalkie_big_nohaplotig	exon	158087097	158087242	100	+	.	Parent=FBgn0039738.1.mrna1;Target=FBgn0039738.1 711 856 +
Chr2	stalkie_big_nohaplotig	exon	158087314	158087474	100	+	.	Parent=FBgn0039738.1.mrna1;Target=FBgn0039738.1 857 1017 +
Chr2	stalkie_big_nohaplotig	exon	158090721	158090935	100	+	.	Parent=FBgn0039738.1.mrna1;Target=FBgn0039738.1 1018 1232 +
Chr2	stalkie_big_nohaplotig	exon	158092523	158092742	100	+	.	Parent=FBgn0039738.1.mrna1;Target=FBgn0039738.1 1233 1452 +
Chr2	stalkie_big_nohaplotig	CDS	158085872	158085890	.	+	0	Parent=FBgn0039738.1.mrna1;Target=FBgn0039738.1 1 19 +
Chr2	stalkie_big_nohaplotig	CDS	158085958	158086089	.	+	2	Parent=FBgn0039738.1.mrna1;Target=FBgn0039738.1 20 151 +
Chr2	stalkie_big_nohaplotig	CDS	158086166	158086297	.	+	2	Parent=FBgn0039738.1.mrna1;Target=FBgn0039738.1 152 283 +
Chr2	stalkie_big_nohaplotig	CDS	158086365	158086549	.	+	2	Parent=FBgn0039738.1.mrna1;Target=FBgn0039738.1 284 468 +
Chr2	stalkie_big_nohaplotig	CDS	158086682	158086834	.	+	0	Parent=FBgn0039738.1.mrna1;Target=FBgn0039738.1 469 621 +
Chr2	stalkie_big_nohaplotig	CDS	158086943	158087031	.	+	0	Parent=FBgn0039738.1.mrna1;Target=FBgn0039738.1 622 710 +
Chr2	stalkie_big_nohaplotig	CDS	158087097	158087242	.	+	1	Parent=FBgn0039738.1.mrna1;Target=FBgn0039738.1 711 856 +
Chr2	stalkie_big_nohaplotig	CDS	158087314	158087474	.	+	2	Parent=FBgn0039738.1.mrna1;Target=FBgn0039738.1 857 1017 +
Chr2	stalkie_big_nohaplotig	CDS	158090721	158090935	.	+	0	Parent=FBgn0039738.1.mrna1;Target=FBgn0039738.1 1018 1232 +
Chr2	stalkie_big_nohaplotig	CDS	158092523	158092742	.	+	1	Parent=FBgn0039738.1.mrna1;Target=FBgn0039738.1 1233 1452 +
Chr2	gffcl	locus	158099028	158104726	.	+	.	ID=RLOC_00023225;geneIDs=FBgn0039737.1.path1;transcripts=FBgn0039737.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158099028	158104726	.	+	.	ID=FBgn0039737.1.mrna1;geneID=FBgn0039737.1.path1;Name=FBgn0039737.1;Dir=sensecoverage=100.0;identity=99.8;matches=1470;mismatches=3;indels=0;unknowns=0;locus=RLOC_00023225
Chr2	stalkie_big_nohaplotig	exon	158099028	158099253	99	+	.	Parent=FBgn0039737.1.mrna1;Target=FBgn0039737.1 1 226 +
Chr2	stalkie_big_nohaplotig	exon	158103295	158103687	99	+	.	Parent=FBgn0039737.1.mrna1;Target=FBgn0039737.1 227 619 +
Chr2	stalkie_big_nohaplotig	exon	158103758	158104162	100	+	.	Parent=FBgn0039737.1.mrna1;Target=FBgn0039737.1 620 1024 +
Chr2	stalkie_big_nohaplotig	exon	158104217	158104483	100	+	.	Parent=FBgn0039737.1.mrna1;Target=FBgn0039737.1 1025 1291 +
Chr2	stalkie_big_nohaplotig	exon	158104545	158104726	100	+	.	Parent=FBgn0039737.1.mrna1;Target=FBgn0039737.1 1292 1473 +
Chr2	stalkie_big_nohaplotig	CDS	158099028	158099253	.	+	0	Parent=FBgn0039737.1.mrna1;Target=FBgn0039737.1 1 226 +
Chr2	stalkie_big_nohaplotig	CDS	158103295	158103687	.	+	2	Parent=FBgn0039737.1.mrna1;Target=FBgn0039737.1 227 619 +
Chr2	stalkie_big_nohaplotig	CDS	158103758	158104162	.	+	2	Parent=FBgn0039737.1.mrna1;Target=FBgn0039737.1 620 1024 +
Chr2	stalkie_big_nohaplotig	CDS	158104217	158104483	.	+	2	Parent=FBgn0039737.1.mrna1;Target=FBgn0039737.1 1025 1291 +
Chr2	stalkie_big_nohaplotig	CDS	158104545	158104726	.	+	2	Parent=FBgn0039737.1.mrna1;Target=FBgn0039737.1 1292 1473 +
Chr2	gffcl	locus	158105849	158106244	.	+	.	ID=RLOC_00023226;geneIDs=comp836791_c0_seq1.path1;transcripts=comp836791_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158105849	158106244	.	+	.	ID=comp836791_c0_seq1.mrna1;geneID=comp836791_c0_seq1.path1;Name=comp836791_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=396;mismatches=0;indels=0;unknowns=0;Target=comp836791_c0_seq1 396 1 .;CDS_Target=comp836791_c0_seq1 107 3 .;locus=RLOC_00023226
Chr2	stalkie_big_nohaplotig	exon	158105849	158106244	100	+	.	Parent=comp836791_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158105851	158105955	.	+	0	Parent=comp836791_c0_seq1.mrna1
Chr2	gffcl	locus	158107875	158108152	.	+	.	ID=RLOC_00023227;geneIDs=comp115933_c0_seq1.path1;transcripts=comp115933_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158107875	158108152	.	+	.	ID=comp115933_c0_seq1.mrna1;geneID=comp115933_c0_seq1.path1;Name=comp115933_c0_seq1;Dir=indeterminatecoverage=88.8;identity=100.0;matches=278;mismatches=0;indels=0;unknowns=0;Target=comp115933_c0_seq1 293 16 .;CDS_Target=comp115933_c0_seq1 155 18 .;locus=RLOC_00023227
Chr2	stalkie_big_nohaplotig	exon	158107875	158108152	100	+	.	Parent=comp115933_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158107877	158108014	.	+	0	Parent=comp115933_c0_seq1.mrna1
Chr2	gffcl	locus	158108337	158116465	.	-	.	ID=RLOC_00023228;geneIDs=FBgn0016685.1.path1;transcripts=FBgn0016685.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158108337	158116465	.	-	.	ID=FBgn0016685.1.mrna1;geneID=FBgn0016685.1.path1;Name=FBgn0016685.1;Dir=sensecoverage=100.0;identity=100.0;matches=465;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023228
Chr2	stalkie_big_nohaplotig	exon	158108337	158108627	100	-	.	Parent=FBgn0016685.1.mrna1;Target=FBgn0016685.1 175 465 +
Chr2	stalkie_big_nohaplotig	exon	158116103	158116245	100	-	.	Parent=FBgn0016685.1.mrna1;Target=FBgn0016685.1 32 174 +
Chr2	stalkie_big_nohaplotig	exon	158116435	158116465	100	-	.	Parent=FBgn0016685.1.mrna1;Target=FBgn0016685.1 1 31 +
Chr2	stalkie_big_nohaplotig	CDS	158108337	158108627	.	-	0	Parent=FBgn0016685.1.mrna1;Target=FBgn0016685.1 175 465 +
Chr2	stalkie_big_nohaplotig	CDS	158116103	158116245	.	-	2	Parent=FBgn0016685.1.mrna1;Target=FBgn0016685.1 32 174 +
Chr2	stalkie_big_nohaplotig	CDS	158116435	158116465	.	-	0	Parent=FBgn0016685.1.mrna1;Target=FBgn0016685.1 1 31 +
Chr2	gffcl	locus	158110438	158115411	.	+	.	ID=RLOC_00023229;geneIDs=FBgn0034275.2.path1;transcripts=FBgn0034275.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158110438	158115411	.	+	.	ID=FBgn0034275.2.mrna1;geneID=FBgn0034275.2.path1;Name=FBgn0034275.2;Dir=sensecoverage=100.0;identity=100.0;matches=1818;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023229
Chr2	stalkie_big_nohaplotig	exon	158110438	158110489	100	+	.	Parent=FBgn0034275.2.mrna1;Target=FBgn0034275.2 1 52 +
Chr2	stalkie_big_nohaplotig	exon	158113215	158113514	100	+	.	Parent=FBgn0034275.2.mrna1;Target=FBgn0034275.2 53 352 +
Chr2	stalkie_big_nohaplotig	exon	158113591	158113812	100	+	.	Parent=FBgn0034275.2.mrna1;Target=FBgn0034275.2 353 574 +
Chr2	stalkie_big_nohaplotig	exon	158113874	158113989	100	+	.	Parent=FBgn0034275.2.mrna1;Target=FBgn0034275.2 575 690 +
Chr2	stalkie_big_nohaplotig	exon	158114049	158114364	100	+	.	Parent=FBgn0034275.2.mrna1;Target=FBgn0034275.2 691 1006 +
Chr2	stalkie_big_nohaplotig	exon	158114419	158114721	100	+	.	Parent=FBgn0034275.2.mrna1;Target=FBgn0034275.2 1007 1309 +
Chr2	stalkie_big_nohaplotig	exon	158114774	158114919	100	+	.	Parent=FBgn0034275.2.mrna1;Target=FBgn0034275.2 1310 1455 +
Chr2	stalkie_big_nohaplotig	exon	158114985	158115155	100	+	.	Parent=FBgn0034275.2.mrna1;Target=FBgn0034275.2 1456 1626 +
Chr2	stalkie_big_nohaplotig	exon	158115220	158115411	100	+	.	Parent=FBgn0034275.2.mrna1;Target=FBgn0034275.2 1627 1818 +
Chr2	stalkie_big_nohaplotig	CDS	158110438	158110489	.	+	0	Parent=FBgn0034275.2.mrna1;Target=FBgn0034275.2 1 52 +
Chr2	stalkie_big_nohaplotig	CDS	158113215	158113514	.	+	2	Parent=FBgn0034275.2.mrna1;Target=FBgn0034275.2 53 352 +
Chr2	stalkie_big_nohaplotig	CDS	158113591	158113812	.	+	2	Parent=FBgn0034275.2.mrna1;Target=FBgn0034275.2 353 574 +
Chr2	stalkie_big_nohaplotig	CDS	158113874	158113989	.	+	2	Parent=FBgn0034275.2.mrna1;Target=FBgn0034275.2 575 690 +
Chr2	stalkie_big_nohaplotig	CDS	158114049	158114364	.	+	0	Parent=FBgn0034275.2.mrna1;Target=FBgn0034275.2 691 1006 +
Chr2	stalkie_big_nohaplotig	CDS	158114419	158114721	.	+	2	Parent=FBgn0034275.2.mrna1;Target=FBgn0034275.2 1007 1309 +
Chr2	stalkie_big_nohaplotig	CDS	158114774	158114919	.	+	2	Parent=FBgn0034275.2.mrna1;Target=FBgn0034275.2 1310 1455 +
Chr2	stalkie_big_nohaplotig	CDS	158114985	158115155	.	+	0	Parent=FBgn0034275.2.mrna1;Target=FBgn0034275.2 1456 1626 +
Chr2	stalkie_big_nohaplotig	CDS	158115220	158115411	.	+	0	Parent=FBgn0034275.2.mrna1;Target=FBgn0034275.2 1627 1818 +
Chr2	gffcl	locus	158117548	158118042	.	+	.	ID=RLOC_00023230;geneIDs=FBgn0039735.1.path1;transcripts=FBgn0039735.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158117548	158118042	.	+	.	ID=FBgn0039735.1.mrna1;geneID=FBgn0039735.1.path1;Name=FBgn0039735.1;Dir=sensecoverage=100.0;identity=100.0;matches=381;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023230
Chr2	stalkie_big_nohaplotig	exon	158117548	158117590	100	+	.	Parent=FBgn0039735.1.mrna1;Target=FBgn0039735.1 1 43 +
Chr2	stalkie_big_nohaplotig	exon	158117650	158117795	100	+	.	Parent=FBgn0039735.1.mrna1;Target=FBgn0039735.1 44 189 +
Chr2	stalkie_big_nohaplotig	exon	158117851	158118042	100	+	.	Parent=FBgn0039735.1.mrna1;Target=FBgn0039735.1 190 381 +
Chr2	stalkie_big_nohaplotig	CDS	158117548	158117590	.	+	0	Parent=FBgn0039735.1.mrna1;Target=FBgn0039735.1 1 43 +
Chr2	stalkie_big_nohaplotig	CDS	158117650	158117795	.	+	2	Parent=FBgn0039735.1.mrna1;Target=FBgn0039735.1 44 189 +
Chr2	stalkie_big_nohaplotig	CDS	158117851	158118042	.	+	0	Parent=FBgn0039735.1.mrna1;Target=FBgn0039735.1 190 381 +
Chr2	gffcl	locus	158118225	158121550	.	-	.	ID=RLOC_00023231;geneIDs=FBgn0039734.1.path1;transcripts=FBgn0039734.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158118225	158121550	.	-	.	ID=FBgn0039734.1.mrna1;geneID=FBgn0039734.1.path1;Name=FBgn0039734.1;Dir=sensecoverage=100.0;identity=100.0;matches=2280;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023231
Chr2	stalkie_big_nohaplotig	exon	158118225	158118261	100	-	.	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 2244 2280 +
Chr2	stalkie_big_nohaplotig	exon	158118319	158118478	100	-	.	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 2084 2243 +
Chr2	stalkie_big_nohaplotig	exon	158118533	158118638	100	-	.	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 1978 2083 +
Chr2	stalkie_big_nohaplotig	exon	158118725	158118821	100	-	.	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 1881 1977 +
Chr2	stalkie_big_nohaplotig	exon	158118874	158119340	100	-	.	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 1414 1880 +
Chr2	stalkie_big_nohaplotig	exon	158119395	158119630	100	-	.	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 1178 1413 +
Chr2	stalkie_big_nohaplotig	exon	158119802	158119940	100	-	.	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 1039 1177 +
Chr2	stalkie_big_nohaplotig	exon	158120064	158120198	100	-	.	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 904 1038 +
Chr2	stalkie_big_nohaplotig	exon	158120254	158120313	100	-	.	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 844 903 +
Chr2	stalkie_big_nohaplotig	exon	158120370	158120596	100	-	.	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 617 843 +
Chr2	stalkie_big_nohaplotig	exon	158120689	158120830	100	-	.	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 475 616 +
Chr2	stalkie_big_nohaplotig	exon	158120884	158121005	100	-	.	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 353 474 +
Chr2	stalkie_big_nohaplotig	exon	158121140	158121379	100	-	.	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 113 352 +
Chr2	stalkie_big_nohaplotig	exon	158121439	158121550	100	-	.	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 1 112 +
Chr2	stalkie_big_nohaplotig	CDS	158118225	158118261	.	-	1	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 2244 2280 +
Chr2	stalkie_big_nohaplotig	CDS	158118319	158118478	.	-	2	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 2084 2243 +
Chr2	stalkie_big_nohaplotig	CDS	158118533	158118638	.	-	0	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 1978 2083 +
Chr2	stalkie_big_nohaplotig	CDS	158118725	158118821	.	-	1	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 1881 1977 +
Chr2	stalkie_big_nohaplotig	CDS	158118874	158119340	.	-	0	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 1414 1880 +
Chr2	stalkie_big_nohaplotig	CDS	158119395	158119630	.	-	2	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 1178 1413 +
Chr2	stalkie_big_nohaplotig	CDS	158119802	158119940	.	-	0	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 1039 1177 +
Chr2	stalkie_big_nohaplotig	CDS	158120064	158120198	.	-	0	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 904 1038 +
Chr2	stalkie_big_nohaplotig	CDS	158120254	158120313	.	-	0	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 844 903 +
Chr2	stalkie_big_nohaplotig	CDS	158120370	158120596	.	-	2	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 617 843 +
Chr2	stalkie_big_nohaplotig	CDS	158120689	158120830	.	-	0	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 475 616 +
Chr2	stalkie_big_nohaplotig	CDS	158120884	158121005	.	-	2	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 353 474 +
Chr2	stalkie_big_nohaplotig	CDS	158121140	158121379	.	-	2	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 113 352 +
Chr2	stalkie_big_nohaplotig	CDS	158121439	158121550	.	-	0	Parent=FBgn0039734.1.mrna1;Target=FBgn0039734.1 1 112 +
Chr2	gffcl	locus	158123133	158125361	.	+	.	ID=RLOC_00023232;geneIDs=FBgn0038325.1.path1;transcripts=FBgn0038325.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158123133	158125361	.	+	.	ID=FBgn0038325.1.mrna1;geneID=FBgn0038325.1.path1;Name=FBgn0038325.1;Dir=sensecoverage=99.8;identity=100.0;matches=1911;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023232
Chr2	stalkie_big_nohaplotig	exon	158123133	158124024	100	+	.	Parent=FBgn0038325.1.mrna1;Target=FBgn0038325.1 4 895 +
Chr2	stalkie_big_nohaplotig	exon	158124085	158124280	100	+	.	Parent=FBgn0038325.1.mrna1;Target=FBgn0038325.1 896 1091 +
Chr2	stalkie_big_nohaplotig	exon	158124341	158124417	100	+	.	Parent=FBgn0038325.1.mrna1;Target=FBgn0038325.1 1092 1168 +
Chr2	stalkie_big_nohaplotig	exon	158124478	158124738	100	+	.	Parent=FBgn0038325.1.mrna1;Target=FBgn0038325.1 1169 1429 +
Chr2	stalkie_big_nohaplotig	exon	158124807	158125003	100	+	.	Parent=FBgn0038325.1.mrna1;Target=FBgn0038325.1 1430 1626 +
Chr2	stalkie_big_nohaplotig	exon	158125074	158125361	100	+	.	Parent=FBgn0038325.1.mrna1;Target=FBgn0038325.1 1627 1914 +
Chr2	stalkie_big_nohaplotig	CDS	158123133	158124024	.	+	0	Parent=FBgn0038325.1.mrna1;Target=FBgn0038325.1 4 895 +
Chr2	stalkie_big_nohaplotig	CDS	158124085	158124280	.	+	2	Parent=FBgn0038325.1.mrna1;Target=FBgn0038325.1 896 1091 +
Chr2	stalkie_big_nohaplotig	CDS	158124341	158124417	.	+	1	Parent=FBgn0038325.1.mrna1;Target=FBgn0038325.1 1092 1168 +
Chr2	stalkie_big_nohaplotig	CDS	158124478	158124738	.	+	2	Parent=FBgn0038325.1.mrna1;Target=FBgn0038325.1 1169 1429 +
Chr2	stalkie_big_nohaplotig	CDS	158124807	158125003	.	+	2	Parent=FBgn0038325.1.mrna1;Target=FBgn0038325.1 1430 1626 +
Chr2	stalkie_big_nohaplotig	CDS	158125074	158125361	.	+	0	Parent=FBgn0038325.1.mrna1;Target=FBgn0038325.1 1627 1914 +
Chr2	gffcl	locus	158128182	158130329	.	-	.	ID=RLOC_00023233;geneIDs=FBgn0038324.1.path1;transcripts=FBgn0038324.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158128182	158130329	.	-	.	ID=FBgn0038324.1.mrna1;geneID=FBgn0038324.1.path1;Name=FBgn0038324.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2148;mismatches=0;indels=0;unknowns=0;Target=FBgn0038324.1 2148 1 .;locus=RLOC_00023233
Chr2	stalkie_big_nohaplotig	exon	158128182	158130329	100	-	.	Parent=FBgn0038324.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158128182	158130329	.	-	0	Parent=FBgn0038324.1.mrna1
Chr2	gffcl	locus	158130857	158132436	.	+	.	ID=RLOC_00023234;geneIDs=FBgn0261679.1.path1;transcripts=FBgn0261679.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158130857	158132436	.	+	.	ID=FBgn0261679.1.mrna1;geneID=FBgn0261679.1.path1;Name=FBgn0261679.1;Dir=sensecoverage=100.0;identity=99.9;matches=1397;mismatches=0;indels=1;unknowns=0;locus=RLOC_00023234
Chr2	stalkie_big_nohaplotig	exon	158130857	158131177	100	+	.	Parent=FBgn0261679.1.mrna1;Target=FBgn0261679.1 1 321 +
Chr2	stalkie_big_nohaplotig	exon	158131240	158131534	100	+	.	Parent=FBgn0261679.1.mrna1;Target=FBgn0261679.1 322 616 +
Chr2	stalkie_big_nohaplotig	exon	158131591	158131752	100	+	.	Parent=FBgn0261679.1.mrna1;Target=FBgn0261679.1 617 778 +
Chr2	stalkie_big_nohaplotig	exon	158131818	158132436	99	+	.	Parent=FBgn0261679.1.mrna1;Target=FBgn0261679.1 779 1398 +
Chr2	stalkie_big_nohaplotig	CDS	158130857	158131177	.	+	0	Parent=FBgn0261679.1.mrna1;Target=FBgn0261679.1 1 321 +
Chr2	stalkie_big_nohaplotig	CDS	158131240	158131534	.	+	0	Parent=FBgn0261679.1.mrna1;Target=FBgn0261679.1 322 616 +
Chr2	stalkie_big_nohaplotig	CDS	158131591	158131752	.	+	2	Parent=FBgn0261679.1.mrna1;Target=FBgn0261679.1 617 778 +
Chr2	stalkie_big_nohaplotig	CDS	158131818	158132436	.	+	2	Parent=FBgn0261679.1.mrna1;Target=FBgn0261679.1 779 1398 +
Chr2	gffcl	locus	158133296	158133993	.	+	.	ID=RLOC_00023235;geneIDs=FBgn0261680.1.path1;transcripts=FBgn0261680.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158133296	158133993	.	+	.	ID=FBgn0261680.1.mrna1;geneID=FBgn0261680.1.path1;Name=FBgn0261680.1;Dir=sensecoverage=100.0;identity=99.5;matches=642;mismatches=3;indels=0;unknowns=0;locus=RLOC_00023235
Chr2	stalkie_big_nohaplotig	exon	158133296	158133542	99	+	.	Parent=FBgn0261680.1.mrna1;Target=FBgn0261680.1 1 247 +
Chr2	stalkie_big_nohaplotig	exon	158133596	158133993	99	+	.	Parent=FBgn0261680.1.mrna1;Target=FBgn0261680.1 248 645 +
Chr2	stalkie_big_nohaplotig	CDS	158133296	158133542	.	+	0	Parent=FBgn0261680.1.mrna1;Target=FBgn0261680.1 1 247 +
Chr2	stalkie_big_nohaplotig	CDS	158133596	158133993	.	+	2	Parent=FBgn0261680.1.mrna1;Target=FBgn0261680.1 248 645 +
Chr2	gffcl	locus	158134071	158134673	.	-	.	ID=RLOC_00023236;geneIDs=FBgn0038323.1.path1;transcripts=FBgn0038323.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158134071	158134673	.	-	.	ID=FBgn0038323.1.mrna1;geneID=FBgn0038323.1.path1;Name=FBgn0038323.1;Dir=sensecoverage=100.0;identity=100.0;matches=489;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023236
Chr2	stalkie_big_nohaplotig	exon	158134071	158134193	100	-	.	Parent=FBgn0038323.1.mrna1;Target=FBgn0038323.1 367 489 +
Chr2	stalkie_big_nohaplotig	exon	158134255	158134518	100	-	.	Parent=FBgn0038323.1.mrna1;Target=FBgn0038323.1 103 366 +
Chr2	stalkie_big_nohaplotig	exon	158134572	158134673	100	-	.	Parent=FBgn0038323.1.mrna1;Target=FBgn0038323.1 1 102 +
Chr2	stalkie_big_nohaplotig	CDS	158134071	158134193	.	-	0	Parent=FBgn0038323.1.mrna1;Target=FBgn0038323.1 367 489 +
Chr2	stalkie_big_nohaplotig	CDS	158134255	158134518	.	-	0	Parent=FBgn0038323.1.mrna1;Target=FBgn0038323.1 103 366 +
Chr2	stalkie_big_nohaplotig	CDS	158134572	158134673	.	-	0	Parent=FBgn0038323.1.mrna1;Target=FBgn0038323.1 1 102 +
Chr2	gffcl	locus	158137259	158137823	.	+	.	ID=RLOC_00023237;geneIDs=comp62413_c0_seq1.path1;transcripts=comp62413_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158137259	158137823	.	+	.	ID=comp62413_c0_seq1.mrna1;geneID=comp62413_c0_seq1.path1;Name=comp62413_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.6;matches=564;mismatches=1;indels=1;unknowns=0;Target=comp62413_c0_seq1 566 1 .;CDS_Target=comp62413_c0_seq1 407 180 .;locus=RLOC_00023237
Chr2	stalkie_big_nohaplotig	exon	158137259	158137823	99	+	.	Parent=comp62413_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158137438	158137664	.	+	0	Parent=comp62413_c0_seq1.mrna1
Chr2	gffcl	locus	158199075	158199525	.	-	.	ID=RLOC_00023238;geneIDs=comp115094_c0_seq1.path2;transcripts=comp115094_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	158199075	158199525	.	-	.	ID=comp115094_c0_seq1.mrna2;geneID=comp115094_c0_seq1.path2;Name=comp115094_c0_seq1;Dir=indeterminatecoverage=99.8;identity=98.0;matches=444;mismatches=7;indels=2;unknowns=0;Target=comp115094_c0_seq1 453 1 .;CDS_Target=comp115094_c0_seq1 290 3 .;locus=RLOC_00023238
Chr2	stalkie_big_nohaplotig	exon	158199075	158199525	98	-	.	Parent=comp115094_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	158199236	158199523	.	-	0	Parent=comp115094_c0_seq1.mrna2
Chr2	gffcl	locus	158209607	158211507	.	+	.	ID=RLOC_00023240;geneIDs=FBgn0261436.1.path1;transcripts=FBgn0261436.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158209607	158211507	.	+	.	ID=FBgn0261436.1.mrna1;geneID=FBgn0261436.1.path1;Name=FBgn0261436.1;Dir=sensecoverage=100.0;identity=100.0;matches=1395;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023240
Chr2	stalkie_big_nohaplotig	exon	158209607	158209744	100	+	.	Parent=FBgn0261436.1.mrna1;Target=FBgn0261436.1 1 138 +
Chr2	stalkie_big_nohaplotig	exon	158209803	158210063	100	+	.	Parent=FBgn0261436.1.mrna1;Target=FBgn0261436.1 139 399 +
Chr2	stalkie_big_nohaplotig	exon	158210267	158210421	100	+	.	Parent=FBgn0261436.1.mrna1;Target=FBgn0261436.1 400 554 +
Chr2	stalkie_big_nohaplotig	exon	158210482	158210653	100	+	.	Parent=FBgn0261436.1.mrna1;Target=FBgn0261436.1 555 726 +
Chr2	stalkie_big_nohaplotig	exon	158210716	158210817	100	+	.	Parent=FBgn0261436.1.mrna1;Target=FBgn0261436.1 727 828 +
Chr2	stalkie_big_nohaplotig	exon	158210882	158211047	100	+	.	Parent=FBgn0261436.1.mrna1;Target=FBgn0261436.1 829 994 +
Chr2	stalkie_big_nohaplotig	exon	158211107	158211507	100	+	.	Parent=FBgn0261436.1.mrna1;Target=FBgn0261436.1 995 1395 +
Chr2	stalkie_big_nohaplotig	CDS	158209607	158209744	.	+	0	Parent=FBgn0261436.1.mrna1;Target=FBgn0261436.1 1 138 +
Chr2	stalkie_big_nohaplotig	CDS	158209803	158210063	.	+	0	Parent=FBgn0261436.1.mrna1;Target=FBgn0261436.1 139 399 +
Chr2	stalkie_big_nohaplotig	CDS	158210267	158210421	.	+	0	Parent=FBgn0261436.1.mrna1;Target=FBgn0261436.1 400 554 +
Chr2	stalkie_big_nohaplotig	CDS	158210482	158210653	.	+	1	Parent=FBgn0261436.1.mrna1;Target=FBgn0261436.1 555 726 +
Chr2	stalkie_big_nohaplotig	CDS	158210716	158210817	.	+	0	Parent=FBgn0261436.1.mrna1;Target=FBgn0261436.1 727 828 +
Chr2	stalkie_big_nohaplotig	CDS	158210882	158211047	.	+	0	Parent=FBgn0261436.1.mrna1;Target=FBgn0261436.1 829 994 +
Chr2	stalkie_big_nohaplotig	CDS	158211107	158211507	.	+	2	Parent=FBgn0261436.1.mrna1;Target=FBgn0261436.1 995 1395 +
Chr2	gffcl	locus	158212505	158217309	.	-	.	ID=RLOC_00023241;geneIDs=FBgn0037218.1.path1;transcripts=FBgn0037218.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158212505	158217309	.	-	.	ID=FBgn0037218.1.mrna1;geneID=FBgn0037218.1.path1;Name=FBgn0037218.1;Dir=sensecoverage=100.0;identity=100.0;matches=3695;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023241
Chr2	stalkie_big_nohaplotig	exon	158212505	158212612	100	-	.	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 3589 3696 +
Chr2	stalkie_big_nohaplotig	exon	158212670	158212831	100	-	.	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 3427 3588 +
Chr2	stalkie_big_nohaplotig	exon	158212899	158213408	100	-	.	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 2917 3426 +
Chr2	stalkie_big_nohaplotig	exon	158213471	158213712	100	-	.	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 2675 2916 +
Chr2	stalkie_big_nohaplotig	exon	158213782	158214108	100	-	.	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 2348 2674 +
Chr2	stalkie_big_nohaplotig	exon	158214161	158214543	100	-	.	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 1965 2347 +
Chr2	stalkie_big_nohaplotig	exon	158214598	158215007	100	-	.	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 1555 1964 +
Chr2	stalkie_big_nohaplotig	exon	158215077	158215753	99	-	.	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 878 1554 +
Chr2	stalkie_big_nohaplotig	exon	158215853	158216078	100	-	.	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 652 877 +
Chr2	stalkie_big_nohaplotig	exon	158216130	158216255	100	-	.	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 526 651 +
Chr2	stalkie_big_nohaplotig	exon	158216310	158216677	100	-	.	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 158 525 +
Chr2	stalkie_big_nohaplotig	exon	158217153	158217309	100	-	.	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 1 157 +
Chr2	stalkie_big_nohaplotig	CDS	158212505	158212612	.	-	0	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 3589 3696 +
Chr2	stalkie_big_nohaplotig	CDS	158212670	158212831	.	-	0	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 3427 3588 +
Chr2	stalkie_big_nohaplotig	CDS	158212899	158213408	.	-	0	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 2917 3426 +
Chr2	stalkie_big_nohaplotig	CDS	158213471	158213712	.	-	2	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 2675 2916 +
Chr2	stalkie_big_nohaplotig	CDS	158213782	158214108	.	-	2	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 2348 2674 +
Chr2	stalkie_big_nohaplotig	CDS	158214161	158214543	.	-	1	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 1965 2347 +
Chr2	stalkie_big_nohaplotig	CDS	158214598	158215007	.	-	0	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 1555 1964 +
Chr2	stalkie_big_nohaplotig	CDS	158215077	158215753	.	-	2	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 878 1554 +
Chr2	stalkie_big_nohaplotig	CDS	158215853	158216078	.	-	0	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 652 877 +
Chr2	stalkie_big_nohaplotig	CDS	158216130	158216255	.	-	0	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 526 651 +
Chr2	stalkie_big_nohaplotig	CDS	158216310	158216677	.	-	2	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 158 525 +
Chr2	stalkie_big_nohaplotig	CDS	158217153	158217309	.	-	0	Parent=FBgn0037218.1.mrna1;Target=FBgn0037218.1 1 157 +
Chr2	gffcl	locus	158221005	158222222	.	+	.	ID=RLOC_00023242;geneIDs=FBgn0038206.1.path1;transcripts=FBgn0038206.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158221005	158222222	.	+	.	ID=FBgn0038206.1.mrna1;geneID=FBgn0038206.1.path1;Name=FBgn0038206.1;Dir=sensecoverage=100.0;identity=100.0;matches=1041;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023242
Chr2	stalkie_big_nohaplotig	exon	158221005	158221041	100	+	.	Parent=FBgn0038206.1.mrna1;Target=FBgn0038206.1 1 37 +
Chr2	stalkie_big_nohaplotig	exon	158221105	158221182	100	+	.	Parent=FBgn0038206.1.mrna1;Target=FBgn0038206.1 38 115 +
Chr2	stalkie_big_nohaplotig	exon	158221238	158222013	100	+	.	Parent=FBgn0038206.1.mrna1;Target=FBgn0038206.1 116 891 +
Chr2	stalkie_big_nohaplotig	exon	158222073	158222222	100	+	.	Parent=FBgn0038206.1.mrna1;Target=FBgn0038206.1 892 1041 +
Chr2	stalkie_big_nohaplotig	CDS	158221005	158221041	.	+	0	Parent=FBgn0038206.1.mrna1;Target=FBgn0038206.1 1 37 +
Chr2	stalkie_big_nohaplotig	CDS	158221105	158221182	.	+	2	Parent=FBgn0038206.1.mrna1;Target=FBgn0038206.1 38 115 +
Chr2	stalkie_big_nohaplotig	CDS	158221238	158222013	.	+	2	Parent=FBgn0038206.1.mrna1;Target=FBgn0038206.1 116 891 +
Chr2	stalkie_big_nohaplotig	CDS	158222073	158222222	.	+	0	Parent=FBgn0038206.1.mrna1;Target=FBgn0038206.1 892 1041 +
Chr2	gffcl	locus	158222494	158223643	.	-	.	ID=RLOC_00023243;geneIDs=FBgn0010340.1.path1;transcripts=FBgn0010340.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158222494	158223643	.	-	.	ID=FBgn0010340.1.mrna1;geneID=FBgn0010340.1.path1;Name=FBgn0010340.1;Dir=sensecoverage=100.0;identity=100.0;matches=918;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023243
Chr2	stalkie_big_nohaplotig	exon	158222494	158222580	100	-	.	Parent=FBgn0010340.1.mrna1;Target=FBgn0010340.1 832 918 +
Chr2	stalkie_big_nohaplotig	exon	158222635	158222905	100	-	.	Parent=FBgn0010340.1.mrna1;Target=FBgn0010340.1 561 831 +
Chr2	stalkie_big_nohaplotig	exon	158222966	158223054	100	-	.	Parent=FBgn0010340.1.mrna1;Target=FBgn0010340.1 472 560 +
Chr2	stalkie_big_nohaplotig	exon	158223111	158223279	100	-	.	Parent=FBgn0010340.1.mrna1;Target=FBgn0010340.1 303 471 +
Chr2	stalkie_big_nohaplotig	exon	158223342	158223643	100	-	.	Parent=FBgn0010340.1.mrna1;Target=FBgn0010340.1 1 302 +
Chr2	stalkie_big_nohaplotig	CDS	158222494	158222580	.	-	0	Parent=FBgn0010340.1.mrna1;Target=FBgn0010340.1 832 918 +
Chr2	stalkie_big_nohaplotig	CDS	158222635	158222905	.	-	1	Parent=FBgn0010340.1.mrna1;Target=FBgn0010340.1 561 831 +
Chr2	stalkie_big_nohaplotig	CDS	158222966	158223054	.	-	0	Parent=FBgn0010340.1.mrna1;Target=FBgn0010340.1 472 560 +
Chr2	stalkie_big_nohaplotig	CDS	158223111	158223279	.	-	1	Parent=FBgn0010340.1.mrna1;Target=FBgn0010340.1 303 471 +
Chr2	stalkie_big_nohaplotig	CDS	158223342	158223643	.	-	0	Parent=FBgn0010340.1.mrna1;Target=FBgn0010340.1 1 302 +
Chr2	gffcl	locus	158224656	158228676	.	-	.	ID=RLOC_00023244;geneIDs=FBgn0262955.2.path1;transcripts=FBgn0262955.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158224656	158228676	.	-	.	ID=FBgn0262955.2.mrna1;geneID=FBgn0262955.2.path1;Name=FBgn0262955.2;Dir=sensecoverage=100.0;identity=100.0;matches=3549;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023244
Chr2	stalkie_big_nohaplotig	exon	158224656	158225057	100	-	.	Parent=FBgn0262955.2.mrna1;Target=FBgn0262955.2 3148 3549 +
Chr2	stalkie_big_nohaplotig	exon	158225111	158225271	100	-	.	Parent=FBgn0262955.2.mrna1;Target=FBgn0262955.2 2987 3147 +
Chr2	stalkie_big_nohaplotig	exon	158225328	158225649	100	-	.	Parent=FBgn0262955.2.mrna1;Target=FBgn0262955.2 2665 2986 +
Chr2	stalkie_big_nohaplotig	exon	158225710	158226945	100	-	.	Parent=FBgn0262955.2.mrna1;Target=FBgn0262955.2 1429 2664 +
Chr2	stalkie_big_nohaplotig	exon	158227000	158227238	100	-	.	Parent=FBgn0262955.2.mrna1;Target=FBgn0262955.2 1190 1428 +
Chr2	stalkie_big_nohaplotig	exon	158227298	158228219	100	-	.	Parent=FBgn0262955.2.mrna1;Target=FBgn0262955.2 268 1189 +
Chr2	stalkie_big_nohaplotig	exon	158228279	158228502	100	-	.	Parent=FBgn0262955.2.mrna1;Target=FBgn0262955.2 44 267 +
Chr2	stalkie_big_nohaplotig	exon	158228634	158228676	100	-	.	Parent=FBgn0262955.2.mrna1;Target=FBgn0262955.2 1 43 +
Chr2	stalkie_big_nohaplotig	CDS	158224656	158225057	.	-	0	Parent=FBgn0262955.2.mrna1;Target=FBgn0262955.2 3148 3549 +
Chr2	stalkie_big_nohaplotig	CDS	158225111	158225271	.	-	2	Parent=FBgn0262955.2.mrna1;Target=FBgn0262955.2 2987 3147 +
Chr2	stalkie_big_nohaplotig	CDS	158225328	158225649	.	-	0	Parent=FBgn0262955.2.mrna1;Target=FBgn0262955.2 2665 2986 +
Chr2	stalkie_big_nohaplotig	CDS	158225710	158226945	.	-	0	Parent=FBgn0262955.2.mrna1;Target=FBgn0262955.2 1429 2664 +
Chr2	stalkie_big_nohaplotig	CDS	158227000	158227238	.	-	2	Parent=FBgn0262955.2.mrna1;Target=FBgn0262955.2 1190 1428 +
Chr2	stalkie_big_nohaplotig	CDS	158227298	158228219	.	-	0	Parent=FBgn0262955.2.mrna1;Target=FBgn0262955.2 268 1189 +
Chr2	stalkie_big_nohaplotig	CDS	158228279	158228502	.	-	2	Parent=FBgn0262955.2.mrna1;Target=FBgn0262955.2 44 267 +
Chr2	stalkie_big_nohaplotig	CDS	158228634	158228676	.	-	0	Parent=FBgn0262955.2.mrna1;Target=FBgn0262955.2 1 43 +
Chr2	gffcl	locus	158229977	158230768	.	+	.	ID=RLOC_00023245;geneIDs=FBgn0030322.1.path1;transcripts=FBgn0030322.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158229977	158230768	.	+	.	ID=FBgn0030322.1.mrna1;geneID=FBgn0030322.1.path1;Name=FBgn0030322.1;Dir=sensecoverage=100.0;identity=99.4;matches=358;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023245
Chr2	stalkie_big_nohaplotig	exon	158229977	158230240	99	+	.	Parent=FBgn0030322.1.mrna1;Target=FBgn0030322.1 1 264 +
Chr2	stalkie_big_nohaplotig	exon	158230673	158230768	100	+	.	Parent=FBgn0030322.1.mrna1;Target=FBgn0030322.1 265 360 +
Chr2	stalkie_big_nohaplotig	CDS	158229977	158230240	.	+	0	Parent=FBgn0030322.1.mrna1;Target=FBgn0030322.1 1 264 +
Chr2	stalkie_big_nohaplotig	CDS	158230673	158230768	.	+	0	Parent=FBgn0030322.1.mrna1;Target=FBgn0030322.1 265 360 +
Chr2	gffcl	locus	158233805	158235074	.	-	.	ID=RLOC_00023246;geneIDs=FBgn0038207.1.path1;transcripts=FBgn0038207.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158233805	158235074	.	-	.	ID=FBgn0038207.1.mrna1;geneID=FBgn0038207.1.path1;Name=FBgn0038207.1;Dir=sensecoverage=100.0;identity=100.0;matches=513;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023246
Chr2	stalkie_big_nohaplotig	exon	158233805	158234254	100	-	.	Parent=FBgn0038207.1.mrna1;Target=FBgn0038207.1 64 513 +
Chr2	stalkie_big_nohaplotig	exon	158235012	158235074	100	-	.	Parent=FBgn0038207.1.mrna1;Target=FBgn0038207.1 1 63 +
Chr2	stalkie_big_nohaplotig	CDS	158233805	158234254	.	-	0	Parent=FBgn0038207.1.mrna1;Target=FBgn0038207.1 64 513 +
Chr2	stalkie_big_nohaplotig	CDS	158235012	158235074	.	-	0	Parent=FBgn0038207.1.mrna1;Target=FBgn0038207.1 1 63 +
Chr2	gffcl	locus	158250423	158252143	.	-	.	ID=RLOC_00023247;geneIDs=comp158239_c0_seq1.path1;transcripts=comp158239_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158250423	158252143	.	-	.	ID=comp158239_c0_seq1.mrna1;geneID=comp158239_c0_seq1.path1;Name=comp158239_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=1695;mismatches=26;indels=20;unknowns=0;Target=comp158239_c0_seq1 1741 1 .;CDS_Target=comp158239_c0_seq1 405 202 .;locus=RLOC_00023247
Chr2	stalkie_big_nohaplotig	exon	158250423	158252143	97	-	.	Parent=comp158239_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158251739	158251942	.	-	0	Parent=comp158239_c0_seq1.mrna1
Chr2	gffcl	locus	158252214	158253004	.	-	.	ID=RLOC_00023248;geneIDs=comp101490_c0_seq1.path1;transcripts=comp101490_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158252214	158253004	.	-	.	ID=comp101490_c0_seq1.mrna1;geneID=comp101490_c0_seq1.path1;Name=comp101490_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.2;matches=761;mismatches=7;indels=23;unknowns=0;Target=comp101490_c0_seq1 768 1 .;CDS_Target=comp101490_c0_seq1 750 649 .;locus=RLOC_00023248
Chr2	stalkie_big_nohaplotig	exon	158252214	158253004	96	-	.	Parent=comp101490_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158252232	158252333	.	-	0	Parent=comp101490_c0_seq1.mrna1
Chr2	gffcl	locus	158253441	158257907	.	-	.	ID=RLOC_00023249;geneIDs=FBgn0051028.1.path1;transcripts=FBgn0051028.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158253441	158257907	.	-	.	ID=FBgn0051028.1.mrna1;geneID=FBgn0051028.1.path1;Name=FBgn0051028.1;Dir=sensecoverage=100.0;identity=100.0;matches=3483;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023249
Chr2	stalkie_big_nohaplotig	exon	158253441	158253541	100	-	.	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 3383 3483 +
Chr2	stalkie_big_nohaplotig	exon	158253601	158253730	100	-	.	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 3253 3382 +
Chr2	stalkie_big_nohaplotig	exon	158253786	158253936	100	-	.	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 3102 3252 +
Chr2	stalkie_big_nohaplotig	exon	158254052	158254241	100	-	.	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 2912 3101 +
Chr2	stalkie_big_nohaplotig	exon	158254299	158254383	100	-	.	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 2827 2911 +
Chr2	stalkie_big_nohaplotig	exon	158254577	158254711	100	-	.	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 2692 2826 +
Chr2	stalkie_big_nohaplotig	exon	158254788	158255258	100	-	.	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 2221 2691 +
Chr2	stalkie_big_nohaplotig	exon	158255320	158255491	100	-	.	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 2049 2220 +
Chr2	stalkie_big_nohaplotig	exon	158255546	158256589	100	-	.	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 1005 2048 +
Chr2	stalkie_big_nohaplotig	exon	158256748	158257342	100	-	.	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 410 1004 +
Chr2	stalkie_big_nohaplotig	exon	158257410	158257715	100	-	.	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 104 409 +
Chr2	stalkie_big_nohaplotig	exon	158257805	158257907	100	-	.	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 1 103 +
Chr2	stalkie_big_nohaplotig	CDS	158253441	158253541	.	-	2	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 3383 3483 +
Chr2	stalkie_big_nohaplotig	CDS	158253601	158253730	.	-	0	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 3253 3382 +
Chr2	stalkie_big_nohaplotig	CDS	158253786	158253936	.	-	1	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 3102 3252 +
Chr2	stalkie_big_nohaplotig	CDS	158254052	158254241	.	-	2	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 2912 3101 +
Chr2	stalkie_big_nohaplotig	CDS	158254299	158254383	.	-	0	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 2827 2911 +
Chr2	stalkie_big_nohaplotig	CDS	158254577	158254711	.	-	0	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 2692 2826 +
Chr2	stalkie_big_nohaplotig	CDS	158254788	158255258	.	-	0	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 2221 2691 +
Chr2	stalkie_big_nohaplotig	CDS	158255320	158255491	.	-	1	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 2049 2220 +
Chr2	stalkie_big_nohaplotig	CDS	158255546	158256589	.	-	1	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 1005 2048 +
Chr2	stalkie_big_nohaplotig	CDS	158256748	158257342	.	-	2	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 410 1004 +
Chr2	stalkie_big_nohaplotig	CDS	158257410	158257715	.	-	2	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 104 409 +
Chr2	stalkie_big_nohaplotig	CDS	158257805	158257907	.	-	0	Parent=FBgn0051028.1.mrna1;Target=FBgn0051028.1 1 103 +
Chr2	gffcl	locus	158280372	158280930	.	+	.	ID=RLOC_00023250;geneIDs=comp145393_c0_seq1.path1;transcripts=comp145393_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158280372	158280930	.	+	.	ID=comp145393_c0_seq1.mrna1;geneID=comp145393_c0_seq1.path1;Name=comp145393_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=559;mismatches=0;indels=0;unknowns=0;Target=comp145393_c0_seq1 559 1 .;CDS_Target=comp145393_c0_seq1 336 277 .;locus=RLOC_00023250
Chr2	stalkie_big_nohaplotig	exon	158280372	158280930	100	+	.	Parent=comp145393_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158280648	158280707	.	+	0	Parent=comp145393_c0_seq1.mrna1
Chr2	gffcl	locus	158283410	158285421	.	+	.	ID=RLOC_00023251;geneIDs=comp154205_c1_seq1.path1;transcripts=comp154205_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158283410	158285421	.	+	.	ID=comp154205_c1_seq1.mrna1;geneID=comp154205_c1_seq1.path1;Name=comp154205_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=2012;mismatches=0;indels=5;unknowns=0;Target=comp154205_c1_seq1 2017 1 .;CDS_Target=comp154205_c1_seq1 1142 957 .;locus=RLOC_00023251
Chr2	stalkie_big_nohaplotig	exon	158283410	158285421	99	+	.	Parent=comp154205_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158284361	158284546	.	+	0	Parent=comp154205_c1_seq1.mrna1
Chr2	gffcl	locus	158299700	158328128	.	-	.	ID=RLOC_00023252;geneIDs=FBgn0011582.1.path1;transcripts=FBgn0011582.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158299700	158328128	.	-	.	ID=FBgn0011582.1.mrna1;geneID=FBgn0011582.1.path1;Name=FBgn0011582.1;Dir=sensecoverage=100.0;identity=99.8;matches=1141;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023252
Chr2	stalkie_big_nohaplotig	exon	158299700	158300234	99	-	.	Parent=FBgn0011582.1.mrna1;Target=FBgn0011582.1 609 1143 +
Chr2	stalkie_big_nohaplotig	exon	158308916	158309161	100	-	.	Parent=FBgn0011582.1.mrna1;Target=FBgn0011582.1 363 608 +
Chr2	stalkie_big_nohaplotig	exon	158320678	158320807	100	-	.	Parent=FBgn0011582.1.mrna1;Target=FBgn0011582.1 233 362 +
Chr2	stalkie_big_nohaplotig	exon	158327897	158328128	100	-	.	Parent=FBgn0011582.1.mrna1;Target=FBgn0011582.1 1 232 +
Chr2	stalkie_big_nohaplotig	CDS	158299700	158300234	.	-	1	Parent=FBgn0011582.1.mrna1;Target=FBgn0011582.1 609 1143 +
Chr2	stalkie_big_nohaplotig	CDS	158308916	158309161	.	-	1	Parent=FBgn0011582.1.mrna1;Target=FBgn0011582.1 363 608 +
Chr2	stalkie_big_nohaplotig	CDS	158320678	158320807	.	-	2	Parent=FBgn0011582.1.mrna1;Target=FBgn0011582.1 233 362 +
Chr2	stalkie_big_nohaplotig	CDS	158327897	158328128	.	-	0	Parent=FBgn0011582.1.mrna1;Target=FBgn0011582.1 1 232 +
Chr2	gffcl	locus	158362826	158365714	.	-	.	ID=RLOC_00023253;geneIDs=FBgn0038211.1.path1;transcripts=FBgn0038211.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158362826	158365714	.	-	.	ID=FBgn0038211.1.mrna1;geneID=FBgn0038211.1.path1;Name=FBgn0038211.1;Dir=sensecoverage=100.0;identity=99.6;matches=1799;mismatches=7;indels=0;unknowns=0;locus=RLOC_00023253
Chr2	stalkie_big_nohaplotig	exon	158362826	158363243	99	-	.	Parent=FBgn0038211.1.mrna1;Target=FBgn0038211.1 1389 1806 +
Chr2	stalkie_big_nohaplotig	exon	158363344	158363860	100	-	.	Parent=FBgn0038211.1.mrna1;Target=FBgn0038211.1 872 1388 +
Chr2	stalkie_big_nohaplotig	exon	158363921	158364083	98	-	.	Parent=FBgn0038211.1.mrna1;Target=FBgn0038211.1 709 871 +
Chr2	stalkie_big_nohaplotig	exon	158364203	158364477	98	-	.	Parent=FBgn0038211.1.mrna1;Target=FBgn0038211.1 434 708 +
Chr2	stalkie_big_nohaplotig	exon	158364544	158364706	100	-	.	Parent=FBgn0038211.1.mrna1;Target=FBgn0038211.1 271 433 +
Chr2	stalkie_big_nohaplotig	exon	158365445	158365714	99	-	.	Parent=FBgn0038211.1.mrna1;Target=FBgn0038211.1 1 270 +
Chr2	stalkie_big_nohaplotig	CDS	158362826	158363243	.	-	1	Parent=FBgn0038211.1.mrna1;Target=FBgn0038211.1 1389 1806 +
Chr2	stalkie_big_nohaplotig	CDS	158363344	158363860	.	-	2	Parent=FBgn0038211.1.mrna1;Target=FBgn0038211.1 872 1388 +
Chr2	stalkie_big_nohaplotig	CDS	158363921	158364083	.	-	0	Parent=FBgn0038211.1.mrna1;Target=FBgn0038211.1 709 871 +
Chr2	stalkie_big_nohaplotig	CDS	158364203	158364477	.	-	2	Parent=FBgn0038211.1.mrna1;Target=FBgn0038211.1 434 708 +
Chr2	stalkie_big_nohaplotig	CDS	158364544	158364706	.	-	0	Parent=FBgn0038211.1.mrna1;Target=FBgn0038211.1 271 433 +
Chr2	stalkie_big_nohaplotig	CDS	158365445	158365714	.	-	0	Parent=FBgn0038211.1.mrna1;Target=FBgn0038211.1 1 270 +
Chr2	gffcl	locus	158372839	158378886	.	-	.	ID=RLOC_00023254;geneIDs=FBgn0038211.2.path1;transcripts=FBgn0038211.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158372839	158378886	.	-	.	ID=FBgn0038211.2.mrna1;geneID=FBgn0038211.2.path1;Name=FBgn0038211.2;Dir=sensecoverage=100.0;identity=99.9;matches=1468;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023254
Chr2	stalkie_big_nohaplotig	exon	158372839	158373253	100	-	.	Parent=FBgn0038211.2.mrna1;Target=FBgn0038211.2 1056 1470 +
Chr2	stalkie_big_nohaplotig	exon	158373326	158373992	99	-	.	Parent=FBgn0038211.2.mrna1;Target=FBgn0038211.2 389 1055 +
Chr2	stalkie_big_nohaplotig	exon	158374055	158374220	100	-	.	Parent=FBgn0038211.2.mrna1;Target=FBgn0038211.2 223 388 +
Chr2	stalkie_big_nohaplotig	exon	158378665	158378886	100	-	.	Parent=FBgn0038211.2.mrna1;Target=FBgn0038211.2 1 222 +
Chr2	stalkie_big_nohaplotig	CDS	158372839	158373253	.	-	1	Parent=FBgn0038211.2.mrna1;Target=FBgn0038211.2 1056 1470 +
Chr2	stalkie_big_nohaplotig	CDS	158373326	158373992	.	-	2	Parent=FBgn0038211.2.mrna1;Target=FBgn0038211.2 389 1055 +
Chr2	stalkie_big_nohaplotig	CDS	158374055	158374220	.	-	0	Parent=FBgn0038211.2.mrna1;Target=FBgn0038211.2 223 388 +
Chr2	stalkie_big_nohaplotig	CDS	158378665	158378886	.	-	0	Parent=FBgn0038211.2.mrna1;Target=FBgn0038211.2 1 222 +
Chr2	gffcl	locus	158379079	158379475	.	-	.	ID=RLOC_00023255;geneIDs=comp213502_c0_seq1.path1;transcripts=comp213502_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158379079	158379475	.	-	.	ID=comp213502_c0_seq1.mrna1;geneID=comp213502_c0_seq1.path1;Name=comp213502_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=396;mismatches=1;indels=0;unknowns=0;Target=comp213502_c0_seq1 397 1 .;CDS_Target=comp213502_c0_seq1 84 1 .;locus=RLOC_00023255
Chr2	stalkie_big_nohaplotig	exon	158379079	158379475	99	-	.	Parent=comp213502_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158379392	158379475	.	-	0	Parent=comp213502_c0_seq1.mrna1
Chr2	gffcl	locus	158425586	158425834	.	-	.	ID=RLOC_00023256;geneIDs=FBgn0027083.1.path2;transcripts=FBgn0027083.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	158425586	158425834	.	-	.	ID=FBgn0027083.1.mrna2;geneID=FBgn0027083.1.path2;Name=FBgn0027083.1;Dir=indeterminatecoverage=13.5;identity=100.0;matches=249;mismatches=0;indels=0;unknowns=0;Target=FBgn0027083.1 1842 1594 .;locus=RLOC_00023256
Chr2	stalkie_big_nohaplotig	exon	158425586	158425834	100	-	.	Parent=FBgn0027083.1.mrna2
Chr2	gffcl	locus	158459226	158470594	.	+	.	ID=RLOC_00023257;geneIDs=FBgn0051314.1.path2;transcripts=FBgn0051314.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	158459226	158470594	.	+	.	ID=FBgn0051314.1.mrna2;geneID=FBgn0051314.1.path2;Name=FBgn0051314.1;Dir=sensecoverage=95.5;identity=99.9;matches=4097;mismatches=2;indels=1;unknowns=0;locus=RLOC_00023257
Chr2	stalkie_big_nohaplotig	exon	158459226	158459362	100	+	.	Parent=FBgn0051314.1.mrna2;Target=FBgn0051314.1 194 330 +
Chr2	stalkie_big_nohaplotig	exon	158463042	158463230	98	+	.	Parent=FBgn0051314.1.mrna2;Target=FBgn0051314.1 331 519 +
Chr2	stalkie_big_nohaplotig	exon	158463422	158463567	100	+	.	Parent=FBgn0051314.1.mrna2;Target=FBgn0051314.1 520 665 +
Chr2	stalkie_big_nohaplotig	exon	158465323	158465476	100	+	.	Parent=FBgn0051314.1.mrna2;Target=FBgn0051314.1 666 819 +
Chr2	stalkie_big_nohaplotig	exon	158465554	158465727	100	+	.	Parent=FBgn0051314.1.mrna2;Target=FBgn0051314.1 820 993 +
Chr2	stalkie_big_nohaplotig	exon	158465804	158466002	100	+	.	Parent=FBgn0051314.1.mrna2;Target=FBgn0051314.1 994 1192 +
Chr2	stalkie_big_nohaplotig	exon	158466082	158467242	100	+	.	Parent=FBgn0051314.1.mrna2;Target=FBgn0051314.1 1193 2353 +
Chr2	stalkie_big_nohaplotig	exon	158467302	158467434	100	+	.	Parent=FBgn0051314.1.mrna2;Target=FBgn0051314.1 2354 2486 +
Chr2	stalkie_big_nohaplotig	exon	158468789	158470594	99	+	.	Parent=FBgn0051314.1.mrna2;Target=FBgn0051314.1 2487 4293 +
Chr2	stalkie_big_nohaplotig	CDS	158459226	158459362	.	+	1	Parent=FBgn0051314.1.mrna2;Target=FBgn0051314.1 194 330 +
Chr2	stalkie_big_nohaplotig	CDS	158463042	158463230	.	+	2	Parent=FBgn0051314.1.mrna2;Target=FBgn0051314.1 331 519 +
Chr2	stalkie_big_nohaplotig	CDS	158463422	158463567	.	+	2	Parent=FBgn0051314.1.mrna2;Target=FBgn0051314.1 520 665 +
Chr2	stalkie_big_nohaplotig	CDS	158465323	158465476	.	+	0	Parent=FBgn0051314.1.mrna2;Target=FBgn0051314.1 666 819 +
Chr2	stalkie_big_nohaplotig	CDS	158465554	158465727	.	+	2	Parent=FBgn0051314.1.mrna2;Target=FBgn0051314.1 820 993 +
Chr2	stalkie_big_nohaplotig	CDS	158465804	158466002	.	+	2	Parent=FBgn0051314.1.mrna2;Target=FBgn0051314.1 994 1192 +
Chr2	stalkie_big_nohaplotig	CDS	158466082	158467242	.	+	1	Parent=FBgn0051314.1.mrna2;Target=FBgn0051314.1 1193 2353 +
Chr2	stalkie_big_nohaplotig	CDS	158467302	158467434	.	+	1	Parent=FBgn0051314.1.mrna2;Target=FBgn0051314.1 2354 2486 +
Chr2	stalkie_big_nohaplotig	CDS	158468789	158470594	.	+	0	Parent=FBgn0051314.1.mrna2;Target=FBgn0051314.1 2487 4293 +
Chr2	gffcl	locus	158472645	158778773	.	.	.	ID=RLOC_00023258;geneIDs=FBgn0000723.1.path1,FBgn0027083.1.path1,FBgn0037683.1.path1,FBgn0038860.1.path1,comp117513_c0_seq1.path1,comp140645_c0_seq1.path2,comp156009_c1_seq1.path1,comp159837_c2_seq1.path1,comp391887_c0_seq1.path1;transcripts=FBgn0027083.1.mrna1,comp159837_c2_seq1.mrna1,FBgn0037683.1.mrna1,FBgn0000723.1.mrna1,comp140645_c0_seq1.mrna2,comp156009_c1_seq1.mrna1,comp391887_c0_seq1.mrna1,comp117513_c0_seq1.mrna1,FBgn0038860.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158472645	158778773	.	+	.	ID=FBgn0027083.1.mrna1;geneID=FBgn0027083.1.path1;Name=FBgn0027083.1;Dir=sensecoverage=86.5;identity=96.5;matches=1253;mismatches=24;indels=22;unknowns=0;locus=RLOC_00023258
Chr2	stalkie_big_nohaplotig	exon	158472645	158472753	100	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1 109 +
Chr2	stalkie_big_nohaplotig	exon	158472817	158473100	100	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 110 393 +
Chr2	stalkie_big_nohaplotig	exon	158473155	158473577	100	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 394 816 +
Chr2	stalkie_big_nohaplotig	exon	158473636	158473729	100	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 817 910 +
Chr2	stalkie_big_nohaplotig	exon	158474119	158474289	100	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 911 1081 +
Chr2	stalkie_big_nohaplotig	exon	158590139	158590142	75	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1082 1085 +
Chr2	stalkie_big_nohaplotig	exon	158606383	158606396	85	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1086 1099 +
Chr2	stalkie_big_nohaplotig	exon	158614548	158614552	100	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1100 1104 +
Chr2	stalkie_big_nohaplotig	exon	158629889	158629934	49	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1105 1165 +
Chr2	stalkie_big_nohaplotig	exon	158632747	158632755	100	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1167 1175 +
Chr2	stalkie_big_nohaplotig	exon	158657862	158657869	100	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1207 1214 +
Chr2	stalkie_big_nohaplotig	exon	158665504	158665510	85	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1215 1221 +
Chr2	stalkie_big_nohaplotig	exon	158671968	158671969	100	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1222 1223 +
Chr2	stalkie_big_nohaplotig	exon	158673746	158673748	100	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1224 1226 +
Chr2	stalkie_big_nohaplotig	exon	158682309	158682314	100	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1384 1389 +
Chr2	stalkie_big_nohaplotig	exon	158689499	158689518	85	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1390 1406 +
Chr2	stalkie_big_nohaplotig	exon	158714179	158714188	100	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1436 1445 +
Chr2	stalkie_big_nohaplotig	exon	158720400	158720416	80	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1446 1466 +
Chr2	stalkie_big_nohaplotig	exon	158728327	158728329	100	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1467 1469 +
Chr2	stalkie_big_nohaplotig	exon	158732645	158732657	76	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1470 1482 +
Chr2	stalkie_big_nohaplotig	exon	158737887	158737899	92	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1483 1495 +
Chr2	stalkie_big_nohaplotig	exon	158772815	158772824	100	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1574 1583 +
Chr2	stalkie_big_nohaplotig	exon	158778769	158778773	100	+	.	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1589 1593 +
Chr2	stalkie_big_nohaplotig	CDS	158472645	158472753	.	+	0	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1 109 +
Chr2	stalkie_big_nohaplotig	CDS	158472817	158473100	.	+	2	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 110 393 +
Chr2	stalkie_big_nohaplotig	CDS	158473155	158473577	.	+	0	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 394 816 +
Chr2	stalkie_big_nohaplotig	CDS	158473636	158473729	.	+	0	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 817 910 +
Chr2	stalkie_big_nohaplotig	CDS	158474119	158474289	.	+	2	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 911 1081 +
Chr2	stalkie_big_nohaplotig	CDS	158590139	158590142	.	+	2	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1082 1085 +
Chr2	stalkie_big_nohaplotig	CDS	158606383	158606396	.	+	1	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1086 1099 +
Chr2	stalkie_big_nohaplotig	CDS	158614548	158614552	.	+	2	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1100 1104 +
Chr2	stalkie_big_nohaplotig	CDS	158629889	158629934	.	+	0	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1105 1165 +
Chr2	stalkie_big_nohaplotig	CDS	158632747	158632755	.	+	2	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1167 1175 +
Chr2	stalkie_big_nohaplotig	CDS	158657862	158657869	.	+	2	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1207 1214 +
Chr2	stalkie_big_nohaplotig	CDS	158665504	158665510	.	+	0	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1215 1221 +
Chr2	stalkie_big_nohaplotig	CDS	158671968	158671969	.	+	2	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1222 1223 +
Chr2	stalkie_big_nohaplotig	CDS	158673746	158673748	.	+	0	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1224 1226 +
Chr2	stalkie_big_nohaplotig	CDS	158682309	158682314	.	+	0	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1384 1389 +
Chr2	stalkie_big_nohaplotig	CDS	158689499	158689518	.	+	0	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1390 1406 +
Chr2	stalkie_big_nohaplotig	CDS	158714179	158714188	.	+	1	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1436 1445 +
Chr2	stalkie_big_nohaplotig	CDS	158720400	158720416	.	+	0	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1446 1466 +
Chr2	stalkie_big_nohaplotig	CDS	158728327	158728329	.	+	1	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1467 1469 +
Chr2	stalkie_big_nohaplotig	CDS	158732645	158732657	.	+	1	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1470 1482 +
Chr2	stalkie_big_nohaplotig	CDS	158737887	158737899	.	+	0	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1483 1495 +
Chr2	stalkie_big_nohaplotig	CDS	158772815	158772824	.	+	2	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1574 1583 +
Chr2	stalkie_big_nohaplotig	CDS	158778769	158778773	.	+	1	Parent=FBgn0027083.1.mrna1;Target=FBgn0027083.1 1589 1593 +
Chr2	stalkie_big_nohaplotig	mRNA	158604368	158714295	.	+	.	ID=comp159837_c2_seq1.mrna1;geneID=comp159837_c2_seq1.path1;Name=comp159837_c2_seq1;Dir=indeterminatecoverage=99.9;identity=99.8;matches=8197;mismatches=10;indels=7;unknowns=0;locus=RLOC_00023258
Chr2	stalkie_big_nohaplotig	exon	158604368	158604829	100	+	.	Parent=comp159837_c2_seq1.mrna1;Target=comp159837_c2_seq1 472 11 .
Chr2	stalkie_big_nohaplotig	exon	158605857	158606347	100	+	.	Parent=comp159837_c2_seq1.mrna1;Target=comp159837_c2_seq1 963 473 .
Chr2	stalkie_big_nohaplotig	exon	158643051	158643328	100	+	.	Parent=comp159837_c2_seq1.mrna1;Target=comp159837_c2_seq1 1241 964 .
Chr2	stalkie_big_nohaplotig	exon	158643395	158643612	100	+	.	Parent=comp159837_c2_seq1.mrna1;Target=comp159837_c2_seq1 1459 1242 .
Chr2	stalkie_big_nohaplotig	exon	158643687	158645526	99	+	.	Parent=comp159837_c2_seq1.mrna1;Target=comp159837_c2_seq1 3300 1460 .
Chr2	stalkie_big_nohaplotig	exon	158645599	158645781	100	+	.	Parent=comp159837_c2_seq1.mrna1;Target=comp159837_c2_seq1 3483 3301 .
Chr2	stalkie_big_nohaplotig	exon	158645841	158645965	100	+	.	Parent=comp159837_c2_seq1.mrna1;Target=comp159837_c2_seq1 3608 3484 .
Chr2	stalkie_big_nohaplotig	exon	158646289	158646382	98	+	.	Parent=comp159837_c2_seq1.mrna1;Target=comp159837_c2_seq1 3702 3609 .
Chr2	stalkie_big_nohaplotig	exon	158647148	158647358	100	+	.	Parent=comp159837_c2_seq1.mrna1;Target=comp159837_c2_seq1 3913 3703 .
Chr2	stalkie_big_nohaplotig	exon	158647422	158647573	100	+	.	Parent=comp159837_c2_seq1.mrna1;Target=comp159837_c2_seq1 4065 3914 .
Chr2	stalkie_big_nohaplotig	exon	158669784	158670006	100	+	.	Parent=comp159837_c2_seq1.mrna1;Target=comp159837_c2_seq1 4288 4066 .
Chr2	stalkie_big_nohaplotig	exon	158672964	158674739	100	+	.	Parent=comp159837_c2_seq1.mrna1;Target=comp159837_c2_seq1 6064 4289 .
Chr2	stalkie_big_nohaplotig	exon	158675561	158675732	100	+	.	Parent=comp159837_c2_seq1.mrna1;Target=comp159837_c2_seq1 6236 6065 .
Chr2	stalkie_big_nohaplotig	exon	158675805	158676080	100	+	.	Parent=comp159837_c2_seq1.mrna1;Target=comp159837_c2_seq1 6512 6237 .
Chr2	stalkie_big_nohaplotig	exon	158676141	158676474	100	+	.	Parent=comp159837_c2_seq1.mrna1;Target=comp159837_c2_seq1 6846 6513 .
Chr2	stalkie_big_nohaplotig	exon	158676540	158676636	100	+	.	Parent=comp159837_c2_seq1.mrna1;Target=comp159837_c2_seq1 6943 6847 .
Chr2	stalkie_big_nohaplotig	exon	158706217	158706406	100	+	.	Parent=comp159837_c2_seq1.mrna1;Target=comp159837_c2_seq1 7133 6944 .
Chr2	stalkie_big_nohaplotig	exon	158712609	158713207	100	+	.	Parent=comp159837_c2_seq1.mrna1;Target=comp159837_c2_seq1 7732 7134 .
Chr2	stalkie_big_nohaplotig	exon	158713807	158714295	100	+	.	Parent=comp159837_c2_seq1.mrna1;Target=comp159837_c2_seq1 8221 7733 .
Chr2	stalkie_big_nohaplotig	CDS	158604811	158604829	.	+	0	Parent=comp159837_c2_seq1.mrna1;Target=comp159837_c2_seq1 472 454 .
Chr2	stalkie_big_nohaplotig	CDS	158605857	158606347	.	+	2	Parent=comp159837_c2_seq1.mrna1;Target=comp159837_c2_seq1 963 473 .
Chr2	stalkie_big_nohaplotig	CDS	158643051	158643170	.	+	0	Parent=comp159837_c2_seq1.mrna1;Target=comp159837_c2_seq1 1083 964 .
Chr2	stalkie_big_nohaplotig	mRNA	158604742	158607112	.	+	.	ID=FBgn0037683.1.mrna1;geneID=FBgn0037683.1.path1;Name=FBgn0037683.1;Dir=sensecoverage=100.0;identity=100.0;matches=1122;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023258
Chr2	stalkie_big_nohaplotig	exon	158604742	158604821	100	+	.	Parent=FBgn0037683.1.mrna1;Target=FBgn0037683.1 1 80 +
Chr2	stalkie_big_nohaplotig	exon	158605849	158606372	100	+	.	Parent=FBgn0037683.1.mrna1;Target=FBgn0037683.1 81 604 +
Chr2	stalkie_big_nohaplotig	exon	158606455	158606619	100	+	.	Parent=FBgn0037683.1.mrna1;Target=FBgn0037683.1 605 769 +
Chr2	stalkie_big_nohaplotig	exon	158606686	158606903	100	+	.	Parent=FBgn0037683.1.mrna1;Target=FBgn0037683.1 770 987 +
Chr2	stalkie_big_nohaplotig	exon	158606978	158607112	100	+	.	Parent=FBgn0037683.1.mrna1;Target=FBgn0037683.1 988 1122 +
Chr2	stalkie_big_nohaplotig	CDS	158604742	158604821	.	+	0	Parent=FBgn0037683.1.mrna1;Target=FBgn0037683.1 1 80 +
Chr2	stalkie_big_nohaplotig	CDS	158605849	158606372	.	+	1	Parent=FBgn0037683.1.mrna1;Target=FBgn0037683.1 81 604 +
Chr2	stalkie_big_nohaplotig	CDS	158606455	158606619	.	+	2	Parent=FBgn0037683.1.mrna1;Target=FBgn0037683.1 605 769 +
Chr2	stalkie_big_nohaplotig	CDS	158606686	158606903	.	+	2	Parent=FBgn0037683.1.mrna1;Target=FBgn0037683.1 770 987 +
Chr2	stalkie_big_nohaplotig	CDS	158606978	158607112	.	+	0	Parent=FBgn0037683.1.mrna1;Target=FBgn0037683.1 988 1122 +
Chr2	stalkie_big_nohaplotig	mRNA	158645378	158712865	.	-	.	ID=FBgn0000723.1.mrna1;geneID=FBgn0000723.1.path1;Name=FBgn0000723.1;Dir=sensecoverage=100.0;identity=100.0;matches=2462;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023258
Chr2	stalkie_big_nohaplotig	exon	158645378	158645526	100	-	.	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 2315 2463 +
Chr2	stalkie_big_nohaplotig	exon	158645599	158645781	100	-	.	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 2132 2314 +
Chr2	stalkie_big_nohaplotig	exon	158667974	158668102	100	-	.	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 2003 2131 +
Chr2	stalkie_big_nohaplotig	exon	158668449	158668535	100	-	.	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 1916 2002 +
Chr2	stalkie_big_nohaplotig	exon	158669355	158669568	100	-	.	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 1702 1915 +
Chr2	stalkie_big_nohaplotig	exon	158669632	158670006	99	-	.	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 1327 1701 +
Chr2	stalkie_big_nohaplotig	exon	158675561	158675732	100	-	.	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 1155 1326 +
Chr2	stalkie_big_nohaplotig	exon	158675805	158676080	100	-	.	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 879 1154 +
Chr2	stalkie_big_nohaplotig	exon	158676141	158676474	100	-	.	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 545 878 +
Chr2	stalkie_big_nohaplotig	exon	158676540	158676636	100	-	.	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 448 544 +
Chr2	stalkie_big_nohaplotig	exon	158706217	158706404	100	-	.	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 260 447 +
Chr2	stalkie_big_nohaplotig	exon	158712607	158712865	100	-	.	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 1 259 +
Chr2	stalkie_big_nohaplotig	CDS	158645378	158645526	.	-	2	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 2315 2463 +
Chr2	stalkie_big_nohaplotig	CDS	158645599	158645781	.	-	2	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 2132 2314 +
Chr2	stalkie_big_nohaplotig	CDS	158667974	158668102	.	-	2	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 2003 2131 +
Chr2	stalkie_big_nohaplotig	CDS	158668449	158668535	.	-	2	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 1916 2002 +
Chr2	stalkie_big_nohaplotig	CDS	158669355	158669568	.	-	0	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 1702 1915 +
Chr2	stalkie_big_nohaplotig	CDS	158669632	158670006	.	-	0	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 1327 1701 +
Chr2	stalkie_big_nohaplotig	CDS	158675561	158675732	.	-	1	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 1155 1326 +
Chr2	stalkie_big_nohaplotig	CDS	158675805	158676080	.	-	1	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 879 1154 +
Chr2	stalkie_big_nohaplotig	CDS	158676141	158676474	.	-	2	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 545 878 +
Chr2	stalkie_big_nohaplotig	CDS	158676540	158676636	.	-	0	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 448 544 +
Chr2	stalkie_big_nohaplotig	CDS	158706217	158706404	.	-	2	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 260 447 +
Chr2	stalkie_big_nohaplotig	CDS	158712607	158712865	.	-	0	Parent=FBgn0000723.1.mrna1;Target=FBgn0000723.1 1 259 +
Chr2	stalkie_big_nohaplotig	mRNA	158668513	158668978	.	-	.	ID=comp140645_c0_seq1.mrna2;geneID=comp140645_c0_seq1.path2;Name=comp140645_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=388;mismatches=0;indels=0;unknowns=0;Target=comp140645_c0_seq1 1 45 +;locus=RLOC_00023258
Chr2	stalkie_big_nohaplotig	exon	158668513	158668535	100	-	.	Parent=comp140645_c0_seq1.mrna2;Target=comp140645_c0_seq1 366 388 +
Chr2	stalkie_big_nohaplotig	exon	158668614	158668978	100	-	.	Parent=comp140645_c0_seq1.mrna2;Target=comp140645_c0_seq1 1 365 +
Chr2	stalkie_big_nohaplotig	CDS	158668934	158668978	.	-	0	Parent=comp140645_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	158669988	158672150	.	+	.	ID=comp156009_c1_seq1.mrna1;geneID=comp156009_c1_seq1.path1;Name=comp156009_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2161;mismatches=2;indels=1;unknowns=0;Target=comp156009_c1_seq1 2164 1 .;CDS_Target=comp156009_c1_seq1 1478 1341 .;locus=RLOC_00023258
Chr2	stalkie_big_nohaplotig	exon	158669988	158672150	99	+	.	Parent=comp156009_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158671327	158671464	.	+	0	Parent=comp156009_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158674718	158675584	.	-	.	ID=comp391887_c0_seq1.mrna1;geneID=comp391887_c0_seq1.path1;Name=comp391887_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=866;mismatches=1;indels=0;unknowns=0;Target=comp391887_c0_seq1 867 1 .;CDS_Target=comp391887_c0_seq1 68 3 .;locus=RLOC_00023258
Chr2	stalkie_big_nohaplotig	exon	158674718	158675584	99	-	.	Parent=comp391887_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158675517	158675582	.	-	0	Parent=comp391887_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158713146	158713830	.	+	.	ID=comp117513_c0_seq1.mrna1;geneID=comp117513_c0_seq1.path1;Name=comp117513_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=683;mismatches=2;indels=0;unknowns=0;Target=comp117513_c0_seq1 685 1 .;CDS_Target=comp117513_c0_seq1 240 49 .;locus=RLOC_00023258
Chr2	stalkie_big_nohaplotig	exon	158713146	158713830	99	+	.	Parent=comp117513_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158713194	158713385	.	+	0	Parent=comp117513_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158719614	158721704	.	+	.	ID=FBgn0038860.1.mrna1;geneID=FBgn0038860.1.path1;Name=FBgn0038860.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2091;mismatches=0;indels=0;unknowns=0;Target=FBgn0038860.1 2091 1 .;locus=RLOC_00023258
Chr2	stalkie_big_nohaplotig	exon	158719614	158721704	100	+	.	Parent=FBgn0038860.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158719614	158721704	.	+	0	Parent=FBgn0038860.1.mrna1
Chr2	gffcl	locus	158523080	158523272	.	-	.	ID=RLOC_00023259;geneIDs=FBgn0051314.1.path1;transcripts=FBgn0051314.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158523080	158523272	.	-	.	ID=FBgn0051314.1.mrna1;geneID=FBgn0051314.1.path1;Name=FBgn0051314.1;Dir=indeterminatecoverage=4.5;identity=100.0;matches=193;mismatches=0;indels=0;unknowns=0;Target=FBgn0051314.1 193 1 .;locus=RLOC_00023259
Chr2	stalkie_big_nohaplotig	exon	158523080	158523272	100	-	.	Parent=FBgn0051314.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158523080	158523272	.	-	0	Parent=FBgn0051314.1.mrna1
Chr2	gffcl	locus	158525978	158527822	.	-	.	ID=RLOC_00023260;geneIDs=FBgn0037387.2.path1,comp91551_c0_seq1.path1;transcripts=FBgn0037387.2.mrna1,comp91551_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158525978	158527822	.	-	.	ID=FBgn0037387.2.mrna1;geneID=FBgn0037387.2.path1;Name=FBgn0037387.2;Dir=sensecoverage=100.0;identity=99.9;matches=1457;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023260
Chr2	stalkie_big_nohaplotig	exon	158525978	158526894	100	-	.	Parent=FBgn0037387.2.mrna1;Target=FBgn0037387.2 542 1458 +
Chr2	stalkie_big_nohaplotig	exon	158526957	158526983	100	-	.	Parent=FBgn0037387.2.mrna1;Target=FBgn0037387.2 515 541 +
Chr2	stalkie_big_nohaplotig	exon	158527046	158527270	100	-	.	Parent=FBgn0037387.2.mrna1;Target=FBgn0037387.2 290 514 +
Chr2	stalkie_big_nohaplotig	exon	158527325	158527486	99	-	.	Parent=FBgn0037387.2.mrna1;Target=FBgn0037387.2 128 289 +
Chr2	stalkie_big_nohaplotig	exon	158527696	158527822	100	-	.	Parent=FBgn0037387.2.mrna1;Target=FBgn0037387.2 1 127 +
Chr2	stalkie_big_nohaplotig	CDS	158525978	158526894	.	-	2	Parent=FBgn0037387.2.mrna1;Target=FBgn0037387.2 542 1458 +
Chr2	stalkie_big_nohaplotig	CDS	158526957	158526983	.	-	2	Parent=FBgn0037387.2.mrna1;Target=FBgn0037387.2 515 541 +
Chr2	stalkie_big_nohaplotig	CDS	158527046	158527270	.	-	2	Parent=FBgn0037387.2.mrna1;Target=FBgn0037387.2 290 514 +
Chr2	stalkie_big_nohaplotig	CDS	158527325	158527486	.	-	2	Parent=FBgn0037387.2.mrna1;Target=FBgn0037387.2 128 289 +
Chr2	stalkie_big_nohaplotig	CDS	158527696	158527822	.	-	0	Parent=FBgn0037387.2.mrna1;Target=FBgn0037387.2 1 127 +
Chr2	stalkie_big_nohaplotig	mRNA	158527466	158527719	.	-	.	ID=comp91551_c0_seq1.mrna1;geneID=comp91551_c0_seq1.path1;Name=comp91551_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=252;mismatches=2;indels=0;unknowns=0;Target=comp91551_c0_seq1 254 1 .;CDS_Target=comp91551_c0_seq1 185 126 .;locus=RLOC_00023260
Chr2	stalkie_big_nohaplotig	exon	158527466	158527719	99	-	.	Parent=comp91551_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158527535	158527594	.	-	0	Parent=comp91551_c0_seq1.mrna1
Chr2	gffcl	locus	158527843	158529174	.	-	.	ID=RLOC_00023261;geneIDs=comp150526_c0_seq1.path1;transcripts=comp150526_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158527843	158529174	.	-	.	ID=comp150526_c0_seq1.mrna1;geneID=comp150526_c0_seq1.path1;Name=comp150526_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1324;mismatches=6;indels=4;unknowns=0;Target=comp150526_c0_seq1 1332 1 .;CDS_Target=comp150526_c0_seq1 1230 1000 .;locus=RLOC_00023261
Chr2	stalkie_big_nohaplotig	exon	158527843	158529174	99	-	.	Parent=comp150526_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158527945	158528174	.	-	0	Parent=comp150526_c0_seq1.mrna1
Chr2	gffcl	locus	158533485	158535333	.	-	.	ID=RLOC_00023262;geneIDs=FBgn0037387.1.path1;transcripts=FBgn0037387.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158533485	158535333	.	-	.	ID=FBgn0037387.1.mrna1;geneID=FBgn0037387.1.path1;Name=FBgn0037387.1;Dir=sensecoverage=100.0;identity=99.6;matches=1423;mismatches=5;indels=0;unknowns=0;locus=RLOC_00023262
Chr2	stalkie_big_nohaplotig	exon	158533485	158534386	99	-	.	Parent=FBgn0037387.1.mrna1;Target=FBgn0037387.1 527 1428 +
Chr2	stalkie_big_nohaplotig	exon	158534451	158534702	99	-	.	Parent=FBgn0037387.1.mrna1;Target=FBgn0037387.1 275 526 +
Chr2	stalkie_big_nohaplotig	exon	158534764	158534925	100	-	.	Parent=FBgn0037387.1.mrna1;Target=FBgn0037387.1 113 274 +
Chr2	stalkie_big_nohaplotig	exon	158535222	158535333	100	-	.	Parent=FBgn0037387.1.mrna1;Target=FBgn0037387.1 1 112 +
Chr2	stalkie_big_nohaplotig	CDS	158533485	158534386	.	-	2	Parent=FBgn0037387.1.mrna1;Target=FBgn0037387.1 527 1428 +
Chr2	stalkie_big_nohaplotig	CDS	158534451	158534702	.	-	2	Parent=FBgn0037387.1.mrna1;Target=FBgn0037387.1 275 526 +
Chr2	stalkie_big_nohaplotig	CDS	158534764	158534925	.	-	2	Parent=FBgn0037387.1.mrna1;Target=FBgn0037387.1 113 274 +
Chr2	stalkie_big_nohaplotig	CDS	158535222	158535333	.	-	0	Parent=FBgn0037387.1.mrna1;Target=FBgn0037387.1 1 112 +
Chr2	gffcl	locus	158543792	158544250	.	-	.	ID=RLOC_00023263;geneIDs=comp115350_c0_seq1.path1;transcripts=comp115350_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158543792	158544250	.	-	.	ID=comp115350_c0_seq1.mrna1;geneID=comp115350_c0_seq1.path1;Name=comp115350_c0_seq1;Dir=indeterminatecoverage=94.6;identity=98.3;matches=451;mismatches=8;indels=0;unknowns=0;Target=comp115350_c0_seq1 479 21 .;CDS_Target=comp115350_c0_seq1 319 176 .;locus=RLOC_00023263
Chr2	stalkie_big_nohaplotig	exon	158543792	158544250	98	-	.	Parent=comp115350_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158543952	158544095	.	-	0	Parent=comp115350_c0_seq1.mrna1
Chr2	gffcl	locus	158544690	158550902	.	.	.	ID=RLOC_00023264;geneIDs=FBgn0037386.1.path1,comp134886_c0_seq1.path1,comp141571_c0_seq1.path1,comp869543_c0_seq1.path1;transcripts=FBgn0037386.1.mrna1,comp134886_c0_seq1.mrna1,comp141571_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158544690	158550902	.	-	.	ID=FBgn0037386.1.mrna1;geneID=FBgn0037386.1.path1;Name=FBgn0037386.1;Dir=sensecoverage=100.0;identity=99.6;matches=1587;mismatches=6;indels=0;unknowns=0;locus=RLOC_00023264
Chr2	stalkie_big_nohaplotig	exon	158544690	158545460	99	-	.	Parent=FBgn0037386.1.mrna1;Target=FBgn0037386.1 823 1593 +
Chr2	stalkie_big_nohaplotig	exon	158545520	158545764	98	-	.	Parent=FBgn0037386.1.mrna1;Target=FBgn0037386.1 578 822 +
Chr2	stalkie_big_nohaplotig	exon	158546667	158546852	99	-	.	Parent=FBgn0037386.1.mrna1;Target=FBgn0037386.1 392 577 +
Chr2	stalkie_big_nohaplotig	exon	158547592	158547732	100	-	.	Parent=FBgn0037386.1.mrna1;Target=FBgn0037386.1 251 391 +
Chr2	stalkie_big_nohaplotig	exon	158547811	158547925	100	-	.	Parent=FBgn0037386.1.mrna1;Target=FBgn0037386.1 136 250 +
Chr2	stalkie_big_nohaplotig	exon	158550768	158550902	100	-	.	Parent=FBgn0037386.1.mrna1;Target=FBgn0037386.1 1 135 +
Chr2	stalkie_big_nohaplotig	CDS	158544690	158545460	.	-	0	Parent=FBgn0037386.1.mrna1;Target=FBgn0037386.1 823 1593 +
Chr2	stalkie_big_nohaplotig	CDS	158545520	158545764	.	-	2	Parent=FBgn0037386.1.mrna1;Target=FBgn0037386.1 578 822 +
Chr2	stalkie_big_nohaplotig	CDS	158546667	158546852	.	-	2	Parent=FBgn0037386.1.mrna1;Target=FBgn0037386.1 392 577 +
Chr2	stalkie_big_nohaplotig	CDS	158547592	158547732	.	-	2	Parent=FBgn0037386.1.mrna1;Target=FBgn0037386.1 251 391 +
Chr2	stalkie_big_nohaplotig	CDS	158547811	158547925	.	-	0	Parent=FBgn0037386.1.mrna1;Target=FBgn0037386.1 136 250 +
Chr2	stalkie_big_nohaplotig	CDS	158550768	158550902	.	-	0	Parent=FBgn0037386.1.mrna1;Target=FBgn0037386.1 1 135 +
Chr2	stalkie_big_nohaplotig	mRNA	158546829	158547614	.	+	.	ID=comp134886_c0_seq1.mrna1;geneID=comp134886_c0_seq1.path1;Name=comp134886_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=783;mismatches=3;indels=0;unknowns=0;Target=comp134886_c0_seq1 786 1 .;CDS_Target=comp134886_c0_seq1 361 236 .;locus=RLOC_00023264
Chr2	stalkie_big_nohaplotig	exon	158546829	158547614	99	+	.	Parent=comp134886_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158547064	158547189	.	+	0	Parent=comp134886_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158547905	158550056	.	-	.	ID=comp141571_c0_seq1.mrna1;geneID=comp141571_c0_seq1.path1;Name=comp141571_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=2150;mismatches=2;indels=0;unknowns=0;Target=comp141571_c0_seq1 2152 1 .;CDS_Target=comp141571_c0_seq1 1761 1567 .;locus=RLOC_00023264
Chr2	stalkie_big_nohaplotig	exon	158547905	158550056	99	-	.	Parent=comp141571_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158548296	158548490	.	-	0	Parent=comp141571_c0_seq1.mrna1
Chr2	gffcl	locus	158546128	158546200	.	-	.	ID=RLOC_00023265;geneIDs=comp151645_c0_seq1.path1;transcripts=comp151645_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158546128	158546200	.	-	.	ID=comp151645_c0_seq1.mrna1;geneID=comp151645_c0_seq1.path1;Name=comp151645_c0_seq1;Dir=indeterminatecoverage=18.5;identity=90.5;matches=67;mismatches=6;indels=1;unknowns=0;Target=comp151645_c0_seq1 76 3 .;locus=RLOC_00023265
Chr2	stalkie_big_nohaplotig	exon	158546128	158546200	90	-	.	Parent=comp151645_c0_seq1.mrna1
Chr2	gffcl	locus	158562316	158562732	.	-	.	ID=RLOC_00023266;geneIDs=comp144612_c0_seq1.path1;transcripts=comp144612_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158562316	158562732	.	-	.	ID=comp144612_c0_seq1.mrna1;geneID=comp144612_c0_seq1.path1;Name=comp144612_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=413;mismatches=4;indels=1;unknowns=0;Target=comp144612_c0_seq1 418 1 .;CDS_Target=comp144612_c0_seq1 417 217 .;locus=RLOC_00023266
Chr2	stalkie_big_nohaplotig	exon	158562316	158562732	98	-	.	Parent=comp144612_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158562317	158562517	.	-	0	Parent=comp144612_c0_seq1.mrna1
Chr2	gffcl	locus	158574200	158574967	.	-	.	ID=RLOC_00023267;geneIDs=comp172414_c0_seq1.path1;transcripts=comp172414_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158574200	158574967	.	-	.	ID=comp172414_c0_seq1.mrna1;geneID=comp172414_c0_seq1.path1;Name=comp172414_c0_seq1;Dir=indeterminatecoverage=98.7;identity=99.5;matches=768;mismatches=0;indels=4;unknowns=0;Target=comp172414_c0_seq1 782 11 .;CDS_Target=comp172414_c0_seq1 420 259 .;locus=RLOC_00023267
Chr2	stalkie_big_nohaplotig	exon	158574200	158574967	99	-	.	Parent=comp172414_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158574562	158574722	.	-	0	Parent=comp172414_c0_seq1.mrna1
Chr2	gffcl	locus	158582533	158583525	.	+	.	ID=RLOC_00023268;geneIDs=comp139851_c1_seq1.path1;transcripts=comp139851_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158582533	158583525	.	+	.	ID=comp139851_c1_seq1.mrna1;geneID=comp139851_c1_seq1.path1;Name=comp139851_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=993;mismatches=0;indels=0;unknowns=0;Target=comp139851_c1_seq1 993 1 .;CDS_Target=comp139851_c1_seq1 120 1 .;locus=RLOC_00023268
Chr2	stalkie_big_nohaplotig	exon	158582533	158583525	100	+	.	Parent=comp139851_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158582533	158582652	.	+	0	Parent=comp139851_c1_seq1.mrna1
Chr2	gffcl	locus	158586724	158587589	.	+	.	ID=RLOC_00023269;geneIDs=comp148022_c2_seq1.path1;transcripts=comp148022_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158586724	158587589	.	+	.	ID=comp148022_c2_seq1.mrna1;geneID=comp148022_c2_seq1.path1;Name=comp148022_c2_seq1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=866;mismatches=0;indels=0;unknowns=0;Target=comp148022_c2_seq1 867 2 .;CDS_Target=comp148022_c2_seq1 187 2 .;locus=RLOC_00023269
Chr2	stalkie_big_nohaplotig	exon	158586724	158587589	100	+	.	Parent=comp148022_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158586724	158586909	.	+	0	Parent=comp148022_c2_seq1.mrna1
Chr2	gffcl	locus	158590407	158591985	.	+	.	ID=RLOC_00023270;geneIDs=comp135357_c0_seq1.path1;transcripts=comp135357_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158590407	158591985	.	+	.	ID=comp135357_c0_seq1.mrna1;geneID=comp135357_c0_seq1.path1;Name=comp135357_c0_seq1;Dir=antisensecoverage=99.9;identity=99.9;matches=1506;mismatches=0;indels=1;unknowns=0;locus=RLOC_00023270
Chr2	stalkie_big_nohaplotig	exon	158590407	158590747	100	+	.	Parent=comp135357_c0_seq1.mrna1;Target=comp135357_c0_seq1 1167 1507 -
Chr2	stalkie_big_nohaplotig	exon	158590821	158591985	99	+	.	Parent=comp135357_c0_seq1.mrna1;Target=comp135357_c0_seq1 1 1166 -
Chr2	stalkie_big_nohaplotig	CDS	158590570	158590747	.	+	0	Parent=comp135357_c0_seq1.mrna1;Target=comp135357_c0_seq1 1167 1344 .
Chr2	stalkie_big_nohaplotig	CDS	158590821	158591229	.	+	2	Parent=comp135357_c0_seq1.mrna1;Target=comp135357_c0_seq1 757 1166 .
Chr2	gffcl	locus	158592012	158592343	.	+	.	ID=RLOC_00023271;geneIDs=FBgn0263749.path1;transcripts=FBgn0263749.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158592012	158592343	.	+	.	ID=FBgn0263749.mrna1;geneID=FBgn0263749.path1;Name=FBgn0263749;Dir=sensecoverage=100.0;identity=99.6;matches=263;mismatches=0;indels=1;unknowns=0;Target=FBgn0263749 3 92 +;locus=RLOC_00023271
Chr2	stalkie_big_nohaplotig	exon	158592012	158592128	99	+	.	Parent=FBgn0263749.mrna1;Target=FBgn0263749 1 118 +
Chr2	stalkie_big_nohaplotig	exon	158592198	158592343	100	+	.	Parent=FBgn0263749.mrna1;Target=FBgn0263749 119 264 +
Chr2	stalkie_big_nohaplotig	CDS	158592014	158592102	.	+	0	Parent=FBgn0263749.mrna1
Chr2	gffcl	locus	158594907	158596483	.	+	.	ID=RLOC_00023272;geneIDs=comp144794_c0_seq1.path1;transcripts=comp144794_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158594907	158596483	.	+	.	ID=comp144794_c0_seq1.mrna1;geneID=comp144794_c0_seq1.path1;Name=comp144794_c0_seq1;Dir=indeterminatecoverage=98.7;identity=100.0;matches=1577;mismatches=0;indels=0;unknowns=0;Target=comp144794_c0_seq1 1577 1 .;CDS_Target=comp144794_c0_seq1 1174 1088 .;locus=RLOC_00023272
Chr2	stalkie_big_nohaplotig	exon	158594907	158596483	100	+	.	Parent=comp144794_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158595994	158596080	.	+	0	Parent=comp144794_c0_seq1.mrna1
Chr2	gffcl	locus	158597285	158599967	.	+	.	ID=RLOC_00023273;geneIDs=FBgn0037684.1.path1;transcripts=FBgn0037684.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158597285	158599967	.	+	.	ID=FBgn0037684.1.mrna1;geneID=FBgn0037684.1.path1;Name=FBgn0037684.1;Dir=sensecoverage=100.0;identity=99.9;matches=1439;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023273
Chr2	stalkie_big_nohaplotig	exon	158597285	158597554	100	+	.	Parent=FBgn0037684.1.mrna1;Target=FBgn0037684.1 1 270 +
Chr2	stalkie_big_nohaplotig	exon	158597628	158597698	100	+	.	Parent=FBgn0037684.1.mrna1;Target=FBgn0037684.1 271 341 +
Chr2	stalkie_big_nohaplotig	exon	158598640	158598736	100	+	.	Parent=FBgn0037684.1.mrna1;Target=FBgn0037684.1 342 438 +
Chr2	stalkie_big_nohaplotig	exon	158598786	158599139	100	+	.	Parent=FBgn0037684.1.mrna1;Target=FBgn0037684.1 439 792 +
Chr2	stalkie_big_nohaplotig	exon	158599210	158599502	100	+	.	Parent=FBgn0037684.1.mrna1;Target=FBgn0037684.1 793 1085 +
Chr2	stalkie_big_nohaplotig	exon	158599554	158599776	100	+	.	Parent=FBgn0037684.1.mrna1;Target=FBgn0037684.1 1086 1308 +
Chr2	stalkie_big_nohaplotig	exon	158599836	158599967	99	+	.	Parent=FBgn0037684.1.mrna1;Target=FBgn0037684.1 1309 1440 +
Chr2	stalkie_big_nohaplotig	CDS	158597285	158597554	.	+	0	Parent=FBgn0037684.1.mrna1;Target=FBgn0037684.1 1 270 +
Chr2	stalkie_big_nohaplotig	CDS	158597628	158597698	.	+	0	Parent=FBgn0037684.1.mrna1;Target=FBgn0037684.1 271 341 +
Chr2	stalkie_big_nohaplotig	CDS	158598640	158598736	.	+	1	Parent=FBgn0037684.1.mrna1;Target=FBgn0037684.1 342 438 +
Chr2	stalkie_big_nohaplotig	CDS	158598786	158599139	.	+	0	Parent=FBgn0037684.1.mrna1;Target=FBgn0037684.1 439 792 +
Chr2	stalkie_big_nohaplotig	CDS	158599210	158599502	.	+	0	Parent=FBgn0037684.1.mrna1;Target=FBgn0037684.1 793 1085 +
Chr2	stalkie_big_nohaplotig	CDS	158599554	158599776	.	+	1	Parent=FBgn0037684.1.mrna1;Target=FBgn0037684.1 1086 1308 +
Chr2	stalkie_big_nohaplotig	CDS	158599836	158599967	.	+	0	Parent=FBgn0037684.1.mrna1;Target=FBgn0037684.1 1309 1440 +
Chr2	gffcl	locus	158600124	158602681	.	-	.	ID=RLOC_00023274;geneIDs=FBgn0034957.1.path1;transcripts=FBgn0034957.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158600124	158602681	.	-	.	ID=FBgn0034957.1.mrna1;geneID=FBgn0034957.1.path1;Name=FBgn0034957.1;Dir=sensecoverage=100.0;identity=100.0;matches=1974;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023274
Chr2	stalkie_big_nohaplotig	exon	158600124	158600599	100	-	.	Parent=FBgn0034957.1.mrna1;Target=FBgn0034957.1 1499 1974 +
Chr2	stalkie_big_nohaplotig	exon	158601017	158601714	100	-	.	Parent=FBgn0034957.1.mrna1;Target=FBgn0034957.1 801 1498 +
Chr2	stalkie_big_nohaplotig	exon	158601765	158601940	100	-	.	Parent=FBgn0034957.1.mrna1;Target=FBgn0034957.1 625 800 +
Chr2	stalkie_big_nohaplotig	exon	158602003	158602195	100	-	.	Parent=FBgn0034957.1.mrna1;Target=FBgn0034957.1 432 624 +
Chr2	stalkie_big_nohaplotig	exon	158602251	158602681	100	-	.	Parent=FBgn0034957.1.mrna1;Target=FBgn0034957.1 1 431 +
Chr2	stalkie_big_nohaplotig	CDS	158600124	158600599	.	-	2	Parent=FBgn0034957.1.mrna1;Target=FBgn0034957.1 1499 1974 +
Chr2	stalkie_big_nohaplotig	CDS	158601017	158601714	.	-	1	Parent=FBgn0034957.1.mrna1;Target=FBgn0034957.1 801 1498 +
Chr2	stalkie_big_nohaplotig	CDS	158601765	158601940	.	-	0	Parent=FBgn0034957.1.mrna1;Target=FBgn0034957.1 625 800 +
Chr2	stalkie_big_nohaplotig	CDS	158602003	158602195	.	-	1	Parent=FBgn0034957.1.mrna1;Target=FBgn0034957.1 432 624 +
Chr2	stalkie_big_nohaplotig	CDS	158602251	158602681	.	-	0	Parent=FBgn0034957.1.mrna1;Target=FBgn0034957.1 1 431 +
Chr2	gffcl	locus	158602772	158604229	.	+	.	ID=RLOC_00023275;geneIDs=comp147318_c0_seq1.path1;transcripts=comp147318_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158602772	158604229	.	+	.	ID=comp147318_c0_seq1.mrna1;geneID=comp147318_c0_seq1.path1;Name=comp147318_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1458;mismatches=0;indels=1;unknowns=0;Target=comp147318_c0_seq1 1459 1 .;CDS_Target=comp147318_c0_seq1 1312 1193 .;locus=RLOC_00023275
Chr2	stalkie_big_nohaplotig	exon	158602772	158604229	99	+	.	Parent=comp147318_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158603963	158604082	.	+	0	Parent=comp147318_c0_seq1.mrna1
Chr2	gffcl	locus	158609648	158610113	.	-	.	ID=RLOC_00023276;geneIDs=comp140645_c0_seq1.path1;transcripts=comp140645_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158609648	158610113	.	-	.	ID=comp140645_c0_seq1.mrna1;geneID=comp140645_c0_seq1.path1;Name=comp140645_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=388;mismatches=0;indels=0;unknowns=0;Target=comp140645_c0_seq1 1 45 +;locus=RLOC_00023276
Chr2	stalkie_big_nohaplotig	exon	158609648	158609670	100	-	.	Parent=comp140645_c0_seq1.mrna1;Target=comp140645_c0_seq1 366 388 +
Chr2	stalkie_big_nohaplotig	exon	158609749	158610113	100	-	.	Parent=comp140645_c0_seq1.mrna1;Target=comp140645_c0_seq1 1 365 +
Chr2	stalkie_big_nohaplotig	CDS	158610069	158610113	.	-	0	Parent=comp140645_c0_seq1.mrna1
Chr2	gffcl	locus	158635282	158636893	.	+	.	ID=RLOC_00023277;geneIDs=comp143811_c0_seq1.path1;transcripts=comp143811_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158635282	158636893	.	+	.	ID=comp143811_c0_seq1.mrna1;geneID=comp143811_c0_seq1.path1;Name=comp143811_c0_seq1;Dir=sensecoverage=96.7;identity=100.0;matches=589;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023277
Chr2	stalkie_big_nohaplotig	exon	158635282	158635345	100	+	.	Parent=comp143811_c0_seq1.mrna1;Target=comp143811_c0_seq1 21 84 +
Chr2	stalkie_big_nohaplotig	exon	158635408	158635710	100	+	.	Parent=comp143811_c0_seq1.mrna1;Target=comp143811_c0_seq1 85 387 +
Chr2	stalkie_big_nohaplotig	exon	158635777	158635874	100	+	.	Parent=comp143811_c0_seq1.mrna1;Target=comp143811_c0_seq1 388 485 +
Chr2	stalkie_big_nohaplotig	exon	158636770	158636893	100	+	.	Parent=comp143811_c0_seq1.mrna1;Target=comp143811_c0_seq1 486 609 +
Chr2	stalkie_big_nohaplotig	CDS	158635284	158635345	.	+	0	Parent=comp143811_c0_seq1.mrna1;Target=comp143811_c0_seq1 23 84 +
Chr2	stalkie_big_nohaplotig	CDS	158635408	158635710	.	+	1	Parent=comp143811_c0_seq1.mrna1;Target=comp143811_c0_seq1 85 387 +
Chr2	stalkie_big_nohaplotig	CDS	158635777	158635874	.	+	1	Parent=comp143811_c0_seq1.mrna1;Target=comp143811_c0_seq1 388 485 +
Chr2	stalkie_big_nohaplotig	CDS	158636770	158636777	.	+	2	Parent=comp143811_c0_seq1.mrna1;Target=comp143811_c0_seq1 486 493 +
Chr2	gffcl	locus	158654742	158655159	.	+	.	ID=RLOC_00023278;geneIDs=comp144612_c0_seq1.path2;transcripts=comp144612_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	158654742	158655159	.	+	.	ID=comp144612_c0_seq1.mrna2;geneID=comp144612_c0_seq1.path2;Name=comp144612_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=412;mismatches=6;indels=0;unknowns=0;Target=comp144612_c0_seq1 418 1 .;CDS_Target=comp144612_c0_seq1 417 217 .;locus=RLOC_00023278
Chr2	stalkie_big_nohaplotig	exon	158654742	158655159	98	+	.	Parent=comp144612_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	158654958	158655158	.	+	0	Parent=comp144612_c0_seq1.mrna2
Chr2	gffcl	locus	158659641	158662825	.	+	.	ID=RLOC_00023279;geneIDs=comp160671_c0_seq1.path1;transcripts=comp160671_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158659641	158662825	.	+	.	ID=comp160671_c0_seq1.mrna1;geneID=comp160671_c0_seq1.path1;Name=comp160671_c0_seq1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=2802;mismatches=49;indels=26;unknowns=0;Target=comp160671_c0_seq1 2591 2307 .;locus=RLOC_00023279
Chr2	stalkie_big_nohaplotig	exon	158659641	158660375	98	+	.	Parent=comp160671_c0_seq1.mrna1;Target=comp160671_c0_seq1 731 1 .
Chr2	stalkie_big_nohaplotig	exon	158660701	158662825	97	+	.	Parent=comp160671_c0_seq1.mrna1;Target=comp160671_c0_seq1 2868 732 .
Chr2	stalkie_big_nohaplotig	CDS	158662264	158662548	.	+	0	Parent=comp160671_c0_seq1.mrna1
Chr2	gffcl	locus	158717246	158718179	.	-	.	ID=RLOC_00023280;geneIDs=FBgn0035110.1.path1;transcripts=FBgn0035110.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158717246	158718179	.	-	.	ID=FBgn0035110.1.mrna1;geneID=FBgn0035110.1.path1;Name=FBgn0035110.1;Dir=sensecoverage=100.0;identity=100.0;matches=813;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023280
Chr2	stalkie_big_nohaplotig	exon	158717246	158717897	100	-	.	Parent=FBgn0035110.1.mrna1;Target=FBgn0035110.1 162 813 +
Chr2	stalkie_big_nohaplotig	exon	158717959	158718082	100	-	.	Parent=FBgn0035110.1.mrna1;Target=FBgn0035110.1 38 161 +
Chr2	stalkie_big_nohaplotig	exon	158718143	158718179	100	-	.	Parent=FBgn0035110.1.mrna1;Target=FBgn0035110.1 1 37 +
Chr2	stalkie_big_nohaplotig	CDS	158717246	158717897	.	-	1	Parent=FBgn0035110.1.mrna1;Target=FBgn0035110.1 162 813 +
Chr2	stalkie_big_nohaplotig	CDS	158717959	158718082	.	-	2	Parent=FBgn0035110.1.mrna1;Target=FBgn0035110.1 38 161 +
Chr2	stalkie_big_nohaplotig	CDS	158718143	158718179	.	-	0	Parent=FBgn0035110.1.mrna1;Target=FBgn0035110.1 1 37 +
Chr2	gffcl	locus	158722156	158723118	.	-	.	ID=RLOC_00023281;geneIDs=FBgn0038582.1.path1;transcripts=FBgn0038582.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158722156	158723118	.	-	.	ID=FBgn0038582.1.mrna1;geneID=FBgn0038582.1.path1;Name=FBgn0038582.1;Dir=sensecoverage=100.0;identity=100.0;matches=906;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023281
Chr2	stalkie_big_nohaplotig	exon	158722156	158722843	100	-	.	Parent=FBgn0038582.1.mrna1;Target=FBgn0038582.1 219 906 +
Chr2	stalkie_big_nohaplotig	exon	158722901	158723118	100	-	.	Parent=FBgn0038582.1.mrna1;Target=FBgn0038582.1 1 218 +
Chr2	stalkie_big_nohaplotig	CDS	158722156	158722843	.	-	1	Parent=FBgn0038582.1.mrna1;Target=FBgn0038582.1 219 906 +
Chr2	stalkie_big_nohaplotig	CDS	158722901	158723118	.	-	0	Parent=FBgn0038582.1.mrna1;Target=FBgn0038582.1 1 218 +
Chr2	gffcl	locus	158725108	158725773	.	-	.	ID=RLOC_00023282;geneIDs=comp87193_c0_seq1.path1;transcripts=comp87193_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158725108	158725773	.	-	.	ID=comp87193_c0_seq1.mrna1;geneID=comp87193_c0_seq1.path1;Name=comp87193_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=666;mismatches=0;indels=0;unknowns=0;Target=comp87193_c0_seq1 666 1 .;CDS_Target=comp87193_c0_seq1 481 398 .;locus=RLOC_00023282
Chr2	stalkie_big_nohaplotig	exon	158725108	158725773	100	-	.	Parent=comp87193_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158725293	158725376	.	-	0	Parent=comp87193_c0_seq1.mrna1
Chr2	gffcl	locus	158774979	158782829	.	+	.	ID=RLOC_00023283;geneIDs=FBgn0038679.1.path1;transcripts=FBgn0038679.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158774979	158782829	.	+	.	ID=FBgn0038679.1.mrna1;geneID=FBgn0038679.1.path1;Name=FBgn0038679.1;Dir=sensecoverage=100.0;identity=99.9;matches=4538;mismatches=3;indels=1;unknowns=0;locus=RLOC_00023283
Chr2	stalkie_big_nohaplotig	exon	158774979	158778315	99	+	.	Parent=FBgn0038679.1.mrna1;Target=FBgn0038679.1 1 3337 +
Chr2	stalkie_big_nohaplotig	exon	158781448	158782197	100	+	.	Parent=FBgn0038679.1.mrna1;Target=FBgn0038679.1 3338 4087 +
Chr2	stalkie_big_nohaplotig	exon	158782257	158782402	100	+	.	Parent=FBgn0038679.1.mrna1;Target=FBgn0038679.1 4088 4233 +
Chr2	stalkie_big_nohaplotig	exon	158782462	158782599	100	+	.	Parent=FBgn0038679.1.mrna1;Target=FBgn0038679.1 4234 4371 +
Chr2	stalkie_big_nohaplotig	exon	158782660	158782829	99	+	.	Parent=FBgn0038679.1.mrna1;Target=FBgn0038679.1 4372 4542 +
Chr2	stalkie_big_nohaplotig	CDS	158774979	158778315	.	+	0	Parent=FBgn0038679.1.mrna1;Target=FBgn0038679.1 1 3337 +
Chr2	stalkie_big_nohaplotig	CDS	158781448	158782197	.	+	2	Parent=FBgn0038679.1.mrna1;Target=FBgn0038679.1 3338 4087 +
Chr2	stalkie_big_nohaplotig	CDS	158782257	158782402	.	+	2	Parent=FBgn0038679.1.mrna1;Target=FBgn0038679.1 4088 4233 +
Chr2	stalkie_big_nohaplotig	CDS	158782462	158782599	.	+	0	Parent=FBgn0038679.1.mrna1;Target=FBgn0038679.1 4234 4371 +
Chr2	stalkie_big_nohaplotig	CDS	158782660	158782829	.	+	0	Parent=FBgn0038679.1.mrna1;Target=FBgn0038679.1 4372 4542 +
Chr2	gffcl	locus	158785710	158787601	.	+	.	ID=RLOC_00023284;geneIDs=FBgn0038680.1.path1;transcripts=FBgn0038680.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158785710	158787601	.	+	.	ID=FBgn0038680.1.mrna1;geneID=FBgn0038680.1.path1;Name=FBgn0038680.1;Dir=sensecoverage=100.0;identity=99.9;matches=1642;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023284
Chr2	stalkie_big_nohaplotig	exon	158785710	158785826	100	+	.	Parent=FBgn0038680.1.mrna1;Target=FBgn0038680.1 1 117 +
Chr2	stalkie_big_nohaplotig	exon	158785894	158786267	100	+	.	Parent=FBgn0038680.1.mrna1;Target=FBgn0038680.1 118 491 +
Chr2	stalkie_big_nohaplotig	exon	158786328	158786444	100	+	.	Parent=FBgn0038680.1.mrna1;Target=FBgn0038680.1 492 608 +
Chr2	stalkie_big_nohaplotig	exon	158786502	158786949	100	+	.	Parent=FBgn0038680.1.mrna1;Target=FBgn0038680.1 609 1056 +
Chr2	stalkie_big_nohaplotig	exon	158787014	158787601	99	+	.	Parent=FBgn0038680.1.mrna1;Target=FBgn0038680.1 1057 1644 +
Chr2	stalkie_big_nohaplotig	CDS	158785710	158785826	.	+	0	Parent=FBgn0038680.1.mrna1;Target=FBgn0038680.1 1 117 +
Chr2	stalkie_big_nohaplotig	CDS	158785894	158786267	.	+	0	Parent=FBgn0038680.1.mrna1;Target=FBgn0038680.1 118 491 +
Chr2	stalkie_big_nohaplotig	CDS	158786328	158786444	.	+	1	Parent=FBgn0038680.1.mrna1;Target=FBgn0038680.1 492 608 +
Chr2	stalkie_big_nohaplotig	CDS	158786502	158786949	.	+	1	Parent=FBgn0038680.1.mrna1;Target=FBgn0038680.1 609 1056 +
Chr2	stalkie_big_nohaplotig	CDS	158787014	158787601	.	+	0	Parent=FBgn0038680.1.mrna1;Target=FBgn0038680.1 1057 1644 +
Chr2	gffcl	locus	158791855	158793336	.	-	.	ID=RLOC_00023285;geneIDs=comp155015_c0_seq1.path1;transcripts=comp155015_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158791855	158793336	.	-	.	ID=comp155015_c0_seq1.mrna1;geneID=comp155015_c0_seq1.path1;Name=comp155015_c0_seq1;Dir=indeterminatecoverage=75.1;identity=100.0;matches=1482;mismatches=0;indels=0;unknowns=0;Target=comp155015_c0_seq1 1956 475 .;CDS_Target=comp155015_c0_seq1 580 476 .;locus=RLOC_00023285
Chr2	stalkie_big_nohaplotig	exon	158791855	158793336	100	-	.	Parent=comp155015_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158793231	158793335	.	-	0	Parent=comp155015_c0_seq1.mrna1
Chr2	gffcl	locus	158812096	158838759	.	-	.	ID=RLOC_00023286;geneIDs=FBgn0011225.1.path1,comp151204_c0_seq1.path1;transcripts=FBgn0011225.1.mrna1,comp151204_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158812096	158838759	.	-	.	ID=FBgn0011225.1.mrna1;geneID=FBgn0011225.1.path1;Name=FBgn0011225.1;Dir=sensecoverage=100.0;identity=100.0;matches=3831;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023286
Chr2	stalkie_big_nohaplotig	exon	158812096	158812244	100	-	.	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 3683 3831 +
Chr2	stalkie_big_nohaplotig	exon	158812309	158812404	100	-	.	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 3587 3682 +
Chr2	stalkie_big_nohaplotig	exon	158812470	158812571	100	-	.	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 3485 3586 +
Chr2	stalkie_big_nohaplotig	exon	158812645	158812762	100	-	.	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 3367 3484 +
Chr2	stalkie_big_nohaplotig	exon	158812823	158812943	100	-	.	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 3246 3366 +
Chr2	stalkie_big_nohaplotig	exon	158815257	158815301	100	-	.	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 3201 3245 +
Chr2	stalkie_big_nohaplotig	exon	158815520	158815750	100	-	.	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 2970 3200 +
Chr2	stalkie_big_nohaplotig	exon	158815820	158815941	100	-	.	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 2848 2969 +
Chr2	stalkie_big_nohaplotig	exon	158816052	158816150	100	-	.	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 2749 2847 +
Chr2	stalkie_big_nohaplotig	exon	158816210	158816451	100	-	.	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 2507 2748 +
Chr2	stalkie_big_nohaplotig	exon	158816526	158816958	100	-	.	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 2074 2506 +
Chr2	stalkie_big_nohaplotig	exon	158817860	158818054	100	-	.	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 1879 2073 +
Chr2	stalkie_big_nohaplotig	exon	158818111	158818657	100	-	.	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 1332 1878 +
Chr2	stalkie_big_nohaplotig	exon	158818719	158819125	100	-	.	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 925 1331 +
Chr2	stalkie_big_nohaplotig	exon	158819306	158819568	100	-	.	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 662 924 +
Chr2	stalkie_big_nohaplotig	exon	158819625	158819786	100	-	.	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 500 661 +
Chr2	stalkie_big_nohaplotig	exon	158819853	158819982	100	-	.	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 370 499 +
Chr2	stalkie_big_nohaplotig	exon	158820032	158820105	100	-	.	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 296 369 +
Chr2	stalkie_big_nohaplotig	exon	158821342	158821530	100	-	.	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 107 295 +
Chr2	stalkie_big_nohaplotig	exon	158838654	158838759	100	-	.	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 1 106 +
Chr2	stalkie_big_nohaplotig	CDS	158812096	158812244	.	-	2	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 3683 3831 +
Chr2	stalkie_big_nohaplotig	CDS	158812309	158812404	.	-	2	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 3587 3682 +
Chr2	stalkie_big_nohaplotig	CDS	158812470	158812571	.	-	2	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 3485 3586 +
Chr2	stalkie_big_nohaplotig	CDS	158812645	158812762	.	-	0	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 3367 3484 +
Chr2	stalkie_big_nohaplotig	CDS	158812823	158812943	.	-	1	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 3246 3366 +
Chr2	stalkie_big_nohaplotig	CDS	158815257	158815301	.	-	1	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 3201 3245 +
Chr2	stalkie_big_nohaplotig	CDS	158815520	158815750	.	-	1	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 2970 3200 +
Chr2	stalkie_big_nohaplotig	CDS	158815820	158815941	.	-	0	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 2848 2969 +
Chr2	stalkie_big_nohaplotig	CDS	158816052	158816150	.	-	0	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 2749 2847 +
Chr2	stalkie_big_nohaplotig	CDS	158816210	158816451	.	-	2	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 2507 2748 +
Chr2	stalkie_big_nohaplotig	CDS	158816526	158816958	.	-	0	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 2074 2506 +
Chr2	stalkie_big_nohaplotig	CDS	158817860	158818054	.	-	0	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 1879 2073 +
Chr2	stalkie_big_nohaplotig	CDS	158818111	158818657	.	-	1	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 1332 1878 +
Chr2	stalkie_big_nohaplotig	CDS	158818719	158819125	.	-	0	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 925 1331 +
Chr2	stalkie_big_nohaplotig	CDS	158819306	158819568	.	-	2	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 662 924 +
Chr2	stalkie_big_nohaplotig	CDS	158819625	158819786	.	-	2	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 500 661 +
Chr2	stalkie_big_nohaplotig	CDS	158819853	158819982	.	-	0	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 370 499 +
Chr2	stalkie_big_nohaplotig	CDS	158820032	158820105	.	-	2	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 296 369 +
Chr2	stalkie_big_nohaplotig	CDS	158821342	158821530	.	-	2	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 107 295 +
Chr2	stalkie_big_nohaplotig	CDS	158838654	158838759	.	-	0	Parent=FBgn0011225.1.mrna1;Target=FBgn0011225.1 1 106 +
Chr2	stalkie_big_nohaplotig	mRNA	158821509	158829709	.	-	.	ID=comp151204_c0_seq1.mrna1;geneID=comp151204_c0_seq1.path1;Name=comp151204_c0_seq1;Dir=sensecoverage=100.0;identity=99.9;matches=1364;mismatches=2;indels=0;unknowns=0;Target=comp151204_c0_seq1 53 163 +;locus=RLOC_00023286
Chr2	stalkie_big_nohaplotig	exon	158821509	158821530	100	-	.	Parent=comp151204_c0_seq1.mrna1;Target=comp151204_c0_seq1 1345 1366 +
Chr2	stalkie_big_nohaplotig	exon	158828366	158829709	99	-	.	Parent=comp151204_c0_seq1.mrna1;Target=comp151204_c0_seq1 1 1344 +
Chr2	stalkie_big_nohaplotig	CDS	158829547	158829657	.	-	0	Parent=comp151204_c0_seq1.mrna1
Chr2	gffcl	locus	158841061	158843134	.	-	.	ID=RLOC_00023287;geneIDs=FBgn0038926.1.path1;transcripts=FBgn0038926.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158841061	158843134	.	-	.	ID=FBgn0038926.1.mrna1;geneID=FBgn0038926.1.path1;Name=FBgn0038926.1;Dir=sensecoverage=100.0;identity=99.9;matches=1673;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023287
Chr2	stalkie_big_nohaplotig	exon	158841061	158841194	100	-	.	Parent=FBgn0038926.1.mrna1;Target=FBgn0038926.1 1541 1674 +
Chr2	stalkie_big_nohaplotig	exon	158841250	158841474	100	-	.	Parent=FBgn0038926.1.mrna1;Target=FBgn0038926.1 1316 1540 +
Chr2	stalkie_big_nohaplotig	exon	158841537	158841639	100	-	.	Parent=FBgn0038926.1.mrna1;Target=FBgn0038926.1 1213 1315 +
Chr2	stalkie_big_nohaplotig	exon	158841695	158841972	100	-	.	Parent=FBgn0038926.1.mrna1;Target=FBgn0038926.1 935 1212 +
Chr2	stalkie_big_nohaplotig	exon	158842028	158842127	100	-	.	Parent=FBgn0038926.1.mrna1;Target=FBgn0038926.1 835 934 +
Chr2	stalkie_big_nohaplotig	exon	158842185	158842265	100	-	.	Parent=FBgn0038926.1.mrna1;Target=FBgn0038926.1 754 834 +
Chr2	stalkie_big_nohaplotig	exon	158842326	158842582	99	-	.	Parent=FBgn0038926.1.mrna1;Target=FBgn0038926.1 497 753 +
Chr2	stalkie_big_nohaplotig	exon	158842639	158843134	100	-	.	Parent=FBgn0038926.1.mrna1;Target=FBgn0038926.1 1 496 +
Chr2	stalkie_big_nohaplotig	CDS	158841061	158841194	.	-	2	Parent=FBgn0038926.1.mrna1;Target=FBgn0038926.1 1541 1674 +
Chr2	stalkie_big_nohaplotig	CDS	158841250	158841474	.	-	2	Parent=FBgn0038926.1.mrna1;Target=FBgn0038926.1 1316 1540 +
Chr2	stalkie_big_nohaplotig	CDS	158841537	158841639	.	-	0	Parent=FBgn0038926.1.mrna1;Target=FBgn0038926.1 1213 1315 +
Chr2	stalkie_big_nohaplotig	CDS	158841695	158841972	.	-	2	Parent=FBgn0038926.1.mrna1;Target=FBgn0038926.1 935 1212 +
Chr2	stalkie_big_nohaplotig	CDS	158842028	158842127	.	-	0	Parent=FBgn0038926.1.mrna1;Target=FBgn0038926.1 835 934 +
Chr2	stalkie_big_nohaplotig	CDS	158842185	158842265	.	-	0	Parent=FBgn0038926.1.mrna1;Target=FBgn0038926.1 754 834 +
Chr2	stalkie_big_nohaplotig	CDS	158842326	158842582	.	-	2	Parent=FBgn0038926.1.mrna1;Target=FBgn0038926.1 497 753 +
Chr2	stalkie_big_nohaplotig	CDS	158842639	158843134	.	-	0	Parent=FBgn0038926.1.mrna1;Target=FBgn0038926.1 1 496 +
Chr2	gffcl	locus	158843722	158845598	.	-	.	ID=RLOC_00023288;geneIDs=FBgn0038927.1.path1;transcripts=FBgn0038927.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158843722	158845598	.	-	.	ID=FBgn0038927.1.mrna1;geneID=FBgn0038927.1.path1;Name=FBgn0038927.1;Dir=sensecoverage=100.0;identity=100.0;matches=1746;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023288
Chr2	stalkie_big_nohaplotig	exon	158843722	158844252	100	-	.	Parent=FBgn0038927.1.mrna1;Target=FBgn0038927.1 1216 1746 +
Chr2	stalkie_big_nohaplotig	exon	158844316	158844794	100	-	.	Parent=FBgn0038927.1.mrna1;Target=FBgn0038927.1 737 1215 +
Chr2	stalkie_big_nohaplotig	exon	158844863	158845598	100	-	.	Parent=FBgn0038927.1.mrna1;Target=FBgn0038927.1 1 736 +
Chr2	stalkie_big_nohaplotig	CDS	158843722	158844252	.	-	0	Parent=FBgn0038927.1.mrna1;Target=FBgn0038927.1 1216 1746 +
Chr2	stalkie_big_nohaplotig	CDS	158844316	158844794	.	-	2	Parent=FBgn0038927.1.mrna1;Target=FBgn0038927.1 737 1215 +
Chr2	stalkie_big_nohaplotig	CDS	158844863	158845598	.	-	0	Parent=FBgn0038927.1.mrna1;Target=FBgn0038927.1 1 736 +
Chr2	gffcl	locus	158847054	158847311	.	-	.	ID=RLOC_00023289;geneIDs=Dp_FBgn0244200.path1;transcripts=Dp_FBgn0244200.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158847054	158847311	.	-	.	ID=Dp_FBgn0244200.mrna1;geneID=Dp_FBgn0244200.path1;Name=Dp_FBgn0244200;Dir=indeterminatecoverage=100.0;identity=100.0;matches=258;mismatches=0;indels=0;unknowns=0;Target=Dp_FBgn0244200 258 1 .;locus=RLOC_00023289
Chr2	stalkie_big_nohaplotig	exon	158847054	158847311	100	-	.	Parent=Dp_FBgn0244200.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158847054	158847311	.	-	0	Parent=Dp_FBgn0244200.mrna1
Chr2	gffcl	locus	158851913	158852670	.	+	.	ID=RLOC_00023290;geneIDs=comp145691_c0_seq1.path1;transcripts=comp145691_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158851913	158852670	.	+	.	ID=comp145691_c0_seq1.mrna1;geneID=comp145691_c0_seq1.path1;Name=comp145691_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=754;mismatches=4;indels=0;unknowns=0;Target=comp145691_c0_seq1 758 1 .;CDS_Target=comp145691_c0_seq1 167 3 .;locus=RLOC_00023290
Chr2	stalkie_big_nohaplotig	exon	158851913	158852670	99	+	.	Parent=comp145691_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158851915	158852079	.	+	0	Parent=comp145691_c0_seq1.mrna1
Chr2	gffcl	locus	158934865	158935344	.	+	.	ID=RLOC_00023292;geneIDs=FBgn0039800.1.path1;transcripts=FBgn0039800.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158934865	158935344	.	+	.	ID=FBgn0039800.1.mrna1;geneID=FBgn0039800.1.path1;Name=FBgn0039800.1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=477;mismatches=3;indels=0;unknowns=0;Target=FBgn0039800.1 480 1 .;locus=RLOC_00023292
Chr2	stalkie_big_nohaplotig	exon	158934865	158935344	99	+	.	Parent=FBgn0039800.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158934865	158935344	.	+	0	Parent=FBgn0039800.1.mrna1
Chr2	gffcl	locus	158962824	158964467	.	+	.	ID=RLOC_00023293;geneIDs=ORF574.path1;transcripts=ORF574.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158962824	158964467	.	+	.	ID=ORF574.mrna1;geneID=ORF574.path1;Name=ORF574;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1632;mismatches=12;indels=0;unknowns=0;Target=ORF574 1644 1 .;locus=RLOC_00023293
Chr2	stalkie_big_nohaplotig	exon	158962824	158964467	99	+	.	Parent=ORF574.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158962824	158964467	.	+	0	Parent=ORF574.mrna1
Chr2	gffcl	locus	158978659	158979090	.	-	.	ID=RLOC_00023294;geneIDs=comp117893_c0_seq1.path1;transcripts=comp117893_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158978659	158979090	.	-	.	ID=comp117893_c0_seq1.mrna1;geneID=comp117893_c0_seq1.path1;Name=comp117893_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=349;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023294
Chr2	stalkie_big_nohaplotig	exon	158978659	158978693	100	-	.	Parent=comp117893_c0_seq1.mrna1;Target=comp117893_c0_seq1 315 349 +
Chr2	stalkie_big_nohaplotig	exon	158978777	158979090	100	-	.	Parent=comp117893_c0_seq1.mrna1;Target=comp117893_c0_seq1 1 314 +
Chr2	stalkie_big_nohaplotig	CDS	158978661	158978693	.	-	0	Parent=comp117893_c0_seq1.mrna1;Target=comp117893_c0_seq1 315 347 +
Chr2	stalkie_big_nohaplotig	CDS	158978777	158978839	.	-	0	Parent=comp117893_c0_seq1.mrna1;Target=comp117893_c0_seq1 252 314 +
Chr2	gffcl	locus	158983029	158984559	.	+	.	ID=RLOC_00023295;geneIDs=FBgn0039796.1.path1;transcripts=FBgn0039796.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158983029	158984559	.	+	.	ID=FBgn0039796.1.mrna1;geneID=FBgn0039796.1.path1;Name=FBgn0039796.1;Dir=sensecoverage=100.0;identity=100.0;matches=1140;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023295
Chr2	stalkie_big_nohaplotig	exon	158983029	158983110	100	+	.	Parent=FBgn0039796.1.mrna1;Target=FBgn0039796.1 1 82 +
Chr2	stalkie_big_nohaplotig	exon	158983191	158983360	100	+	.	Parent=FBgn0039796.1.mrna1;Target=FBgn0039796.1 83 252 +
Chr2	stalkie_big_nohaplotig	exon	158983454	158983683	100	+	.	Parent=FBgn0039796.1.mrna1;Target=FBgn0039796.1 253 482 +
Chr2	stalkie_big_nohaplotig	exon	158983746	158983911	100	+	.	Parent=FBgn0039796.1.mrna1;Target=FBgn0039796.1 483 648 +
Chr2	stalkie_big_nohaplotig	exon	158983992	158984269	100	+	.	Parent=FBgn0039796.1.mrna1;Target=FBgn0039796.1 649 926 +
Chr2	stalkie_big_nohaplotig	exon	158984346	158984559	100	+	.	Parent=FBgn0039796.1.mrna1;Target=FBgn0039796.1 927 1140 +
Chr2	stalkie_big_nohaplotig	CDS	158983029	158983110	.	+	0	Parent=FBgn0039796.1.mrna1;Target=FBgn0039796.1 1 82 +
Chr2	stalkie_big_nohaplotig	CDS	158983191	158983360	.	+	2	Parent=FBgn0039796.1.mrna1;Target=FBgn0039796.1 83 252 +
Chr2	stalkie_big_nohaplotig	CDS	158983454	158983683	.	+	0	Parent=FBgn0039796.1.mrna1;Target=FBgn0039796.1 253 482 +
Chr2	stalkie_big_nohaplotig	CDS	158983746	158983911	.	+	1	Parent=FBgn0039796.1.mrna1;Target=FBgn0039796.1 483 648 +
Chr2	stalkie_big_nohaplotig	CDS	158983992	158984269	.	+	0	Parent=FBgn0039796.1.mrna1;Target=FBgn0039796.1 649 926 +
Chr2	stalkie_big_nohaplotig	CDS	158984346	158984559	.	+	1	Parent=FBgn0039796.1.mrna1;Target=FBgn0039796.1 927 1140 +
Chr2	gffcl	locus	158988688	158990952	.	-	.	ID=RLOC_00023296;geneIDs=FBgn0039795.1.path1;transcripts=FBgn0039795.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158988688	158990952	.	-	.	ID=FBgn0039795.1.mrna1;geneID=FBgn0039795.1.path1;Name=FBgn0039795.1;Dir=sensecoverage=100.0;identity=100.0;matches=1986;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023296
Chr2	stalkie_big_nohaplotig	exon	158988688	158989194	100	-	.	Parent=FBgn0039795.1.mrna1;Target=FBgn0039795.1 1480 1986 +
Chr2	stalkie_big_nohaplotig	exon	158989261	158989548	100	-	.	Parent=FBgn0039795.1.mrna1;Target=FBgn0039795.1 1192 1479 +
Chr2	stalkie_big_nohaplotig	exon	158989705	158990831	100	-	.	Parent=FBgn0039795.1.mrna1;Target=FBgn0039795.1 65 1191 +
Chr2	stalkie_big_nohaplotig	exon	158990889	158990952	100	-	.	Parent=FBgn0039795.1.mrna1;Target=FBgn0039795.1 1 64 +
Chr2	stalkie_big_nohaplotig	CDS	158988688	158989194	.	-	0	Parent=FBgn0039795.1.mrna1;Target=FBgn0039795.1 1480 1986 +
Chr2	stalkie_big_nohaplotig	CDS	158989261	158989548	.	-	0	Parent=FBgn0039795.1.mrna1;Target=FBgn0039795.1 1192 1479 +
Chr2	stalkie_big_nohaplotig	CDS	158989705	158990831	.	-	2	Parent=FBgn0039795.1.mrna1;Target=FBgn0039795.1 65 1191 +
Chr2	stalkie_big_nohaplotig	CDS	158990889	158990952	.	-	0	Parent=FBgn0039795.1.mrna1;Target=FBgn0039795.1 1 64 +
Chr2	gffcl	locus	158992563	158993450	.	-	.	ID=RLOC_00023297;geneIDs=comp133697_c0_seq1.path1;transcripts=comp133697_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	158992563	158993450	.	-	.	ID=comp133697_c0_seq1.mrna1;geneID=comp133697_c0_seq1.path1;Name=comp133697_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=888;mismatches=0;indels=0;unknowns=0;Target=comp133697_c0_seq1 888 1 .;CDS_Target=comp133697_c0_seq1 496 362 .;locus=RLOC_00023297
Chr2	stalkie_big_nohaplotig	exon	158992563	158993450	100	-	.	Parent=comp133697_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	158992955	158993089	.	-	0	Parent=comp133697_c0_seq1.mrna1
Chr2	gffcl	locus	159040983	159041900	.	+	.	ID=RLOC_00023298;geneIDs=comp866695_c0_seq1.path1;transcripts=comp866695_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159040983	159041900	.	+	.	ID=comp866695_c0_seq1.mrna1;geneID=comp866695_c0_seq1.path1;Name=comp866695_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=824;mismatches=0;indels=0;unknowns=0;Target=comp866695_c0_seq1 695 823 .;locus=RLOC_00023298
Chr2	stalkie_big_nohaplotig	exon	159040983	159041181	100	+	.	Parent=comp866695_c0_seq1.mrna1;Target=comp866695_c0_seq1 626 824 -
Chr2	stalkie_big_nohaplotig	exon	159041276	159041900	100	+	.	Parent=comp866695_c0_seq1.mrna1;Target=comp866695_c0_seq1 1 625 -
Chr2	stalkie_big_nohaplotig	CDS	159040984	159041112	.	+	0	Parent=comp866695_c0_seq1.mrna1
Chr2	gffcl	locus	159084740	159085509	.	-	.	ID=RLOC_00023299;geneIDs=comp65016_c0_seq1.path1;transcripts=comp65016_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159084740	159085509	.	-	.	ID=comp65016_c0_seq1.mrna1;geneID=comp65016_c0_seq1.path1;Name=comp65016_c0_seq1;Dir=indeterminatecoverage=99.5;identity=100.0;matches=770;mismatches=0;indels=0;unknowns=0;Target=comp65016_c0_seq1 773 4 .;CDS_Target=comp65016_c0_seq1 676 470 .;locus=RLOC_00023299
Chr2	stalkie_big_nohaplotig	exon	159084740	159085509	100	-	.	Parent=comp65016_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159084837	159085043	.	-	0	Parent=comp65016_c0_seq1.mrna1
Chr2	gffcl	locus	159108910	159110718	.	+	.	ID=RLOC_00023300;geneIDs=comp152090_c1_seq1.path1;transcripts=comp152090_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159108910	159110718	.	+	.	ID=comp152090_c1_seq1.mrna1;geneID=comp152090_c1_seq1.path1;Name=comp152090_c1_seq1;Dir=indeterminatecoverage=99.9;identity=98.2;matches=1776;mismatches=10;indels=23;unknowns=0;Target=comp152090_c1_seq1 1787 2 .;CDS_Target=comp152090_c1_seq1 1007 870 .;locus=RLOC_00023300
Chr2	stalkie_big_nohaplotig	exon	159108910	159110718	98	+	.	Parent=comp152090_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159109800	159109937	.	+	0	Parent=comp152090_c1_seq1.mrna1
Chr2	gffcl	locus	159117045	159118534	.	-	.	ID=RLOC_00023301;geneIDs=FBgn0051019.1.path1,comp158961_c0_seq1.path1;transcripts=FBgn0051019.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159117045	159118534	.	-	.	ID=FBgn0051019.1.mrna1;geneID=FBgn0051019.1.path1;Name=FBgn0051019.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1306;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023301
Chr2	stalkie_big_nohaplotig	exon	159117045	159117102	100	-	.	Parent=FBgn0051019.1.mrna1;Target=FBgn0051019.1 1308 1251 .
Chr2	stalkie_big_nohaplotig	exon	159117165	159117478	99	-	.	Parent=FBgn0051019.1.mrna1;Target=FBgn0051019.1 1250 937 .
Chr2	stalkie_big_nohaplotig	exon	159117537	159117908	99	-	.	Parent=FBgn0051019.1.mrna1;Target=FBgn0051019.1 936 565 .
Chr2	stalkie_big_nohaplotig	exon	159117971	159118534	100	-	.	Parent=FBgn0051019.1.mrna1;Target=FBgn0051019.1 564 1 .
Chr2	stalkie_big_nohaplotig	CDS	159117045	159117102	.	-	1	Parent=FBgn0051019.1.mrna1;Target=FBgn0051019.1 1308 1251 .
Chr2	stalkie_big_nohaplotig	CDS	159117165	159117478	.	-	0	Parent=FBgn0051019.1.mrna1;Target=FBgn0051019.1 1250 937 .
Chr2	stalkie_big_nohaplotig	CDS	159117537	159117908	.	-	0	Parent=FBgn0051019.1.mrna1;Target=FBgn0051019.1 936 565 .
Chr2	stalkie_big_nohaplotig	CDS	159117971	159118534	.	-	0	Parent=FBgn0051019.1.mrna1;Target=FBgn0051019.1 564 1 .
Chr2	gffcl	locus	159120516	159121038	.	+	.	ID=RLOC_00023302;geneIDs=comp146391_c0_seq1.path2;transcripts=comp146391_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	159120516	159121038	.	+	.	ID=comp146391_c0_seq1.mrna2;geneID=comp146391_c0_seq1.path2;Name=comp146391_c0_seq1;Dir=indeterminatecoverage=100.0;identity=78.7;matches=413;mismatches=93;indels=19;unknowns=0;Target=comp146391_c0_seq1 508 1 .;CDS_Target=comp146391_c0_seq1 293 291 .;locus=RLOC_00023302
Chr2	stalkie_big_nohaplotig	exon	159120516	159121038	78	+	.	Parent=comp146391_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	159120821	159120823	.	+	0	Parent=comp146391_c0_seq1.mrna2
Chr2	gffcl	locus	159124703	159130972	.	+	.	ID=RLOC_00023303;geneIDs=FBgn0039790.1.path1,comp118969_c0_seq1.path1,comp151965_c0_seq1.path1;transcripts=FBgn0039790.1.mrna1,comp118969_c0_seq1.mrna1,comp151965_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159124703	159130972	.	+	.	ID=FBgn0039790.1.mrna1;geneID=FBgn0039790.1.path1;Name=FBgn0039790.1;Dir=sensecoverage=100.0;identity=99.7;matches=741;mismatches=1;indels=1;unknowns=1;Target=FBgn0039790.1 3 56 +;locus=RLOC_00023303
Chr2	stalkie_big_nohaplotig	exon	159124703	159124803	98	+	.	Parent=FBgn0039790.1.mrna1;Target=FBgn0039790.1 1 102 +
Chr2	stalkie_big_nohaplotig	exon	159124861	159125027	100	+	.	Parent=FBgn0039790.1.mrna1;Target=FBgn0039790.1 103 269 +
Chr2	stalkie_big_nohaplotig	exon	159128854	159128910	100	+	.	Parent=FBgn0039790.1.mrna1;Target=FBgn0039790.1 270 326 +
Chr2	stalkie_big_nohaplotig	exon	159129108	159129222	100	+	.	Parent=FBgn0039790.1.mrna1;Target=FBgn0039790.1 327 441 +
Chr2	stalkie_big_nohaplotig	exon	159130607	159130753	100	+	.	Parent=FBgn0039790.1.mrna1;Target=FBgn0039790.1 442 588 +
Chr2	stalkie_big_nohaplotig	exon	159130817	159130972	100	+	.	Parent=FBgn0039790.1.mrna1;Target=FBgn0039790.1 589 744 +
Chr2	stalkie_big_nohaplotig	CDS	159124705	159124757	.	+	0	Parent=FBgn0039790.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159128887	159129129	.	+	.	ID=comp118969_c0_seq1.mrna1;geneID=comp118969_c0_seq1.path1;Name=comp118969_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=242;mismatches=0;indels=1;unknowns=0;Target=comp118969_c0_seq1 242 1 .;CDS_Target=comp118969_c0_seq1 166 2 .;locus=RLOC_00023303
Chr2	stalkie_big_nohaplotig	exon	159128887	159129129	99	+	.	Parent=comp118969_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159128888	159129052	.	+	0	Parent=comp118969_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159129200	159130628	.	+	.	ID=comp151965_c0_seq1.mrna1;geneID=comp151965_c0_seq1.path1;Name=comp151965_c0_seq1;Dir=indeterminatecoverage=100.0;identity=91.5;matches=1347;mismatches=11;indels=114;unknowns=0;Target=comp151965_c0_seq1 1401 1 .;CDS_Target=comp151965_c0_seq1 255 85 .;locus=RLOC_00023303
Chr2	stalkie_big_nohaplotig	exon	159129200	159130628	91	+	.	Parent=comp151965_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159129284	159129453	.	+	0	Parent=comp151965_c0_seq1.mrna1
Chr2	gffcl	locus	159127243	159127748	.	+	.	ID=RLOC_00023304;geneIDs=comp151947_c0_seq1.path1;transcripts=comp151947_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159127243	159127748	.	+	.	ID=comp151947_c0_seq1.mrna1;geneID=comp151947_c0_seq1.path1;Name=comp151947_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=501;mismatches=5;indels=0;unknowns=0;Target=comp151947_c0_seq1 506 1 .;CDS_Target=comp151947_c0_seq1 119 3 .;locus=RLOC_00023304
Chr2	stalkie_big_nohaplotig	exon	159127243	159127748	99	+	.	Parent=comp151947_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159127245	159127361	.	+	0	Parent=comp151947_c0_seq1.mrna1
Chr2	gffcl	locus	159149444	159152620	.	-	.	ID=RLOC_00023306;geneIDs=FBgn0039787.1.path1;transcripts=FBgn0039787.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159149444	159152620	.	-	.	ID=FBgn0039787.1.mrna1;geneID=FBgn0039787.1.path1;Name=FBgn0039787.1;Dir=sensecoverage=100.0;identity=99.7;matches=2024;mismatches=7;indels=0;unknowns=0;locus=RLOC_00023306
Chr2	stalkie_big_nohaplotig	exon	159149444	159149851	99	-	.	Parent=FBgn0039787.1.mrna1;Target=FBgn0039787.1 1624 2031 +
Chr2	stalkie_big_nohaplotig	exon	159149900	159150045	100	-	.	Parent=FBgn0039787.1.mrna1;Target=FBgn0039787.1 1478 1623 +
Chr2	stalkie_big_nohaplotig	exon	159150101	159150403	99	-	.	Parent=FBgn0039787.1.mrna1;Target=FBgn0039787.1 1175 1477 +
Chr2	stalkie_big_nohaplotig	exon	159150468	159151245	99	-	.	Parent=FBgn0039787.1.mrna1;Target=FBgn0039787.1 397 1174 +
Chr2	stalkie_big_nohaplotig	exon	159152225	159152620	99	-	.	Parent=FBgn0039787.1.mrna1;Target=FBgn0039787.1 1 396 +
Chr2	stalkie_big_nohaplotig	CDS	159149444	159149851	.	-	0	Parent=FBgn0039787.1.mrna1;Target=FBgn0039787.1 1624 2031 +
Chr2	stalkie_big_nohaplotig	CDS	159149900	159150045	.	-	2	Parent=FBgn0039787.1.mrna1;Target=FBgn0039787.1 1478 1623 +
Chr2	stalkie_big_nohaplotig	CDS	159150101	159150403	.	-	2	Parent=FBgn0039787.1.mrna1;Target=FBgn0039787.1 1175 1477 +
Chr2	stalkie_big_nohaplotig	CDS	159150468	159151245	.	-	0	Parent=FBgn0039787.1.mrna1;Target=FBgn0039787.1 397 1174 +
Chr2	stalkie_big_nohaplotig	CDS	159152225	159152620	.	-	0	Parent=FBgn0039787.1.mrna1;Target=FBgn0039787.1 1 396 +
Chr2	gffcl	locus	159155093	159155448	.	-	.	ID=RLOC_00023307;geneIDs=comp135372_c0_seq1.path1;transcripts=comp135372_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159155093	159155448	.	-	.	ID=comp135372_c0_seq1.mrna1;geneID=comp135372_c0_seq1.path1;Name=comp135372_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=353;mismatches=3;indels=0;unknowns=0;Target=comp135372_c0_seq1 356 1 .;CDS_Target=comp135372_c0_seq1 354 217 .;locus=RLOC_00023307
Chr2	stalkie_big_nohaplotig	exon	159155093	159155448	99	-	.	Parent=comp135372_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159155095	159155232	.	-	0	Parent=comp135372_c0_seq1.mrna1
Chr2	gffcl	locus	159157682	159201941	.	-	.	ID=RLOC_00023308;geneIDs=FBgn0082582.1.path1,comp91640_c0_seq1.path1;transcripts=FBgn0082582.1.mrna1,comp91640_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159157682	159201941	.	-	.	ID=FBgn0082582.1.mrna1;geneID=FBgn0082582.1.path1;Name=FBgn0082582.1;Dir=sensecoverage=100.0;identity=100.0;matches=1371;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023308
Chr2	stalkie_big_nohaplotig	exon	159157682	159157755	100	-	.	Parent=FBgn0082582.1.mrna1;Target=FBgn0082582.1 1298 1371 +
Chr2	stalkie_big_nohaplotig	exon	159160600	159160747	100	-	.	Parent=FBgn0082582.1.mrna1;Target=FBgn0082582.1 1150 1297 +
Chr2	stalkie_big_nohaplotig	exon	159160806	159161057	100	-	.	Parent=FBgn0082582.1.mrna1;Target=FBgn0082582.1 898 1149 +
Chr2	stalkie_big_nohaplotig	exon	159161138	159161358	100	-	.	Parent=FBgn0082582.1.mrna1;Target=FBgn0082582.1 677 897 +
Chr2	stalkie_big_nohaplotig	exon	159161421	159161712	100	-	.	Parent=FBgn0082582.1.mrna1;Target=FBgn0082582.1 385 676 +
Chr2	stalkie_big_nohaplotig	exon	159161772	159161924	100	-	.	Parent=FBgn0082582.1.mrna1;Target=FBgn0082582.1 232 384 +
Chr2	stalkie_big_nohaplotig	exon	159201711	159201941	100	-	.	Parent=FBgn0082582.1.mrna1;Target=FBgn0082582.1 1 231 +
Chr2	stalkie_big_nohaplotig	CDS	159157682	159157755	.	-	2	Parent=FBgn0082582.1.mrna1;Target=FBgn0082582.1 1298 1371 +
Chr2	stalkie_big_nohaplotig	CDS	159160600	159160747	.	-	0	Parent=FBgn0082582.1.mrna1;Target=FBgn0082582.1 1150 1297 +
Chr2	stalkie_big_nohaplotig	CDS	159160806	159161057	.	-	0	Parent=FBgn0082582.1.mrna1;Target=FBgn0082582.1 898 1149 +
Chr2	stalkie_big_nohaplotig	CDS	159161138	159161358	.	-	2	Parent=FBgn0082582.1.mrna1;Target=FBgn0082582.1 677 897 +
Chr2	stalkie_big_nohaplotig	CDS	159161421	159161712	.	-	0	Parent=FBgn0082582.1.mrna1;Target=FBgn0082582.1 385 676 +
Chr2	stalkie_big_nohaplotig	CDS	159161772	159161924	.	-	0	Parent=FBgn0082582.1.mrna1;Target=FBgn0082582.1 232 384 +
Chr2	stalkie_big_nohaplotig	CDS	159201711	159201941	.	-	0	Parent=FBgn0082582.1.mrna1;Target=FBgn0082582.1 1 231 +
Chr2	stalkie_big_nohaplotig	mRNA	159161903	159162230	.	-	.	ID=comp91640_c0_seq1.mrna1;geneID=comp91640_c0_seq1.path1;Name=comp91640_c0_seq1;Dir=sensecoverage=100.0;identity=99.2;matches=235;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023308
Chr2	stalkie_big_nohaplotig	exon	159161903	159161924	100	-	.	Parent=comp91640_c0_seq1.mrna1;Target=comp91640_c0_seq1 216 237 +
Chr2	stalkie_big_nohaplotig	exon	159162016	159162230	99	-	.	Parent=comp91640_c0_seq1.mrna1;Target=comp91640_c0_seq1 1 215 +
Chr2	stalkie_big_nohaplotig	CDS	159161904	159161924	.	-	0	Parent=comp91640_c0_seq1.mrna1;Target=comp91640_c0_seq1 216 236 +
Chr2	stalkie_big_nohaplotig	CDS	159162016	159162138	.	-	0	Parent=comp91640_c0_seq1.mrna1;Target=comp91640_c0_seq1 93 215 +
Chr2	gffcl	locus	159159161	159160482	.	-	.	ID=RLOC_00023309;geneIDs=comp146408_c0_seq1.path1;transcripts=comp146408_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159159161	159160482	.	-	.	ID=comp146408_c0_seq1.mrna1;geneID=comp146408_c0_seq1.path1;Name=comp146408_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.8;matches=1321;mismatches=1;indels=1;unknowns=0;Target=comp146408_c0_seq1 1326 4 .;CDS_Target=comp146408_c0_seq1 589 530 .;locus=RLOC_00023309
Chr2	stalkie_big_nohaplotig	exon	159159161	159160482	99	-	.	Parent=comp146408_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159159898	159159956	.	-	0	Parent=comp146408_c0_seq1.mrna1
Chr2	gffcl	locus	159170588	159171211	.	+	.	ID=RLOC_00023310;geneIDs=comp159314_c2_seq1.path1;transcripts=comp159314_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159170588	159171211	.	+	.	ID=comp159314_c2_seq1.mrna1;geneID=comp159314_c2_seq1.path1;Name=comp159314_c2_seq1;Dir=antisensecoverage=19.8;identity=98.4;matches=508;mismatches=4;indels=4;unknowns=0;locus=RLOC_00023310
Chr2	stalkie_big_nohaplotig	exon	159170588	159170749	99	+	.	Parent=comp159314_c2_seq1.mrna1;Target=comp159314_c2_seq1 355 516 -
Chr2	stalkie_big_nohaplotig	exon	159170861	159171211	98	+	.	Parent=comp159314_c2_seq1.mrna1;Target=comp159314_c2_seq1 2 354 -
Chr2	gffcl	locus	159175532	159180059	.	+	.	ID=RLOC_00023311;geneIDs=comp158925_c0_seq1.path1;transcripts=comp158925_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159175532	159180059	.	+	.	ID=comp158925_c0_seq1.mrna1;geneID=comp158925_c0_seq1.path1;Name=comp158925_c0_seq1;Dir=sensecoverage=100.0;identity=99.5;matches=1817;mismatches=6;indels=4;unknowns=0;locus=RLOC_00023311
Chr2	stalkie_big_nohaplotig	exon	159175532	159176391	99	+	.	Parent=comp158925_c0_seq1.mrna1;Target=comp158925_c0_seq1 1 864 +
Chr2	stalkie_big_nohaplotig	exon	159179097	159180059	99	+	.	Parent=comp158925_c0_seq1.mrna1;Target=comp158925_c0_seq1 865 1827 +
Chr2	stalkie_big_nohaplotig	CDS	159176281	159176391	.	+	0	Parent=comp158925_c0_seq1.mrna1;Target=comp158925_c0_seq1 754 864 +
Chr2	stalkie_big_nohaplotig	CDS	159179097	159179261	.	+	0	Parent=comp158925_c0_seq1.mrna1;Target=comp158925_c0_seq1 865 1029 +
Chr2	gffcl	locus	159186957	160502068	.	+	.	ID=RLOC_00023312;geneIDs=comp157986_c0_seq1.path1;transcripts=comp157986_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159186957	160502068	.	+	.	ID=comp157986_c0_seq1.mrna1;geneID=comp157986_c0_seq1.path1;Name=comp157986_c0_seq1;Dir=indeterminatecoverage=91.9;identity=99.1;matches=1202;mismatches=3;indels=8;unknowns=0;Target=comp157986_c0_seq1 845 732 .;locus=RLOC_00023312
Chr2	stalkie_big_nohaplotig	exon	159186957	159188097	99	+	.	Parent=comp157986_c0_seq1.mrna1;Target=comp157986_c0_seq1 1141 1 .
Chr2	stalkie_big_nohaplotig	exon	160442522	160442525	100	+	.	Parent=comp157986_c0_seq1.mrna1;Target=comp157986_c0_seq1 1145 1142 .
Chr2	stalkie_big_nohaplotig	exon	160453906	160453915	100	+	.	Parent=comp157986_c0_seq1.mrna1;Target=comp157986_c0_seq1 1155 1146 .
Chr2	stalkie_big_nohaplotig	exon	160460726	160460731	100	+	.	Parent=comp157986_c0_seq1.mrna1;Target=comp157986_c0_seq1 1161 1156 .
Chr2	stalkie_big_nohaplotig	exon	160465137	160465144	100	+	.	Parent=comp157986_c0_seq1.mrna1;Target=comp157986_c0_seq1 1169 1162 .
Chr2	stalkie_big_nohaplotig	exon	160466841	160466846	100	+	.	Parent=comp157986_c0_seq1.mrna1;Target=comp157986_c0_seq1 1175 1170 .
Chr2	stalkie_big_nohaplotig	exon	160486575	160486579	100	+	.	Parent=comp157986_c0_seq1.mrna1;Target=comp157986_c0_seq1 1180 1176 .
Chr2	stalkie_big_nohaplotig	exon	160488936	160488943	100	+	.	Parent=comp157986_c0_seq1.mrna1;Target=comp157986_c0_seq1 1188 1181 .
Chr2	stalkie_big_nohaplotig	exon	160488980	160488987	100	+	.	Parent=comp157986_c0_seq1.mrna1;Target=comp157986_c0_seq1 1243 1236 .
Chr2	stalkie_big_nohaplotig	exon	160497033	160497036	100	+	.	Parent=comp157986_c0_seq1.mrna1;Target=comp157986_c0_seq1 1247 1244 .
Chr2	stalkie_big_nohaplotig	exon	160502060	160502068	100	+	.	Parent=comp157986_c0_seq1.mrna1;Target=comp157986_c0_seq1 1256 1248 .
Chr2	stalkie_big_nohaplotig	CDS	159187688	159187801	.	+	0	Parent=comp157986_c0_seq1.mrna1
Chr2	gffcl	locus	159194440	159195213	.	+	.	ID=RLOC_00023313;geneIDs=comp134893_c0_seq1.path1;transcripts=comp134893_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159194440	159195213	.	+	.	ID=comp134893_c0_seq1.mrna1;geneID=comp134893_c0_seq1.path1;Name=comp134893_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=766;mismatches=8;indels=0;unknowns=0;Target=comp134893_c0_seq1 774 1 .;CDS_Target=comp134893_c0_seq1 192 94 .;locus=RLOC_00023313
Chr2	stalkie_big_nohaplotig	exon	159194440	159195213	98	+	.	Parent=comp134893_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159194533	159194631	.	+	0	Parent=comp134893_c0_seq1.mrna1
Chr2	gffcl	locus	159213615	159218023	.	+	.	ID=RLOC_00023314;geneIDs=FBgn0027654.1.path1,comp141284_c0_seq1.path1;transcripts=FBgn0027654.1.mrna1,comp141284_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159213615	159218023	.	+	.	ID=FBgn0027654.1.mrna1;geneID=FBgn0027654.1.path1;Name=FBgn0027654.1;Dir=sensecoverage=100.0;identity=100.0;matches=582;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023314
Chr2	stalkie_big_nohaplotig	exon	159213615	159213716	100	+	.	Parent=FBgn0027654.1.mrna1;Target=FBgn0027654.1 1 102 +
Chr2	stalkie_big_nohaplotig	exon	159214716	159214817	100	+	.	Parent=FBgn0027654.1.mrna1;Target=FBgn0027654.1 103 204 +
Chr2	stalkie_big_nohaplotig	exon	159217034	159217189	100	+	.	Parent=FBgn0027654.1.mrna1;Target=FBgn0027654.1 205 360 +
Chr2	stalkie_big_nohaplotig	exon	159217802	159218023	100	+	.	Parent=FBgn0027654.1.mrna1;Target=FBgn0027654.1 361 582 +
Chr2	stalkie_big_nohaplotig	CDS	159213615	159213716	.	+	0	Parent=FBgn0027654.1.mrna1;Target=FBgn0027654.1 1 102 +
Chr2	stalkie_big_nohaplotig	CDS	159214716	159214817	.	+	0	Parent=FBgn0027654.1.mrna1;Target=FBgn0027654.1 103 204 +
Chr2	stalkie_big_nohaplotig	CDS	159217034	159217189	.	+	0	Parent=FBgn0027654.1.mrna1;Target=FBgn0027654.1 205 360 +
Chr2	stalkie_big_nohaplotig	CDS	159217802	159218023	.	+	0	Parent=FBgn0027654.1.mrna1;Target=FBgn0027654.1 361 582 +
Chr2	stalkie_big_nohaplotig	mRNA	159214795	159216511	.	+	.	ID=comp141284_c0_seq1.mrna1;geneID=comp141284_c0_seq1.path1;Name=comp141284_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1716;mismatches=1;indels=0;unknowns=0;Target=comp141284_c0_seq1 1717 1 .;CDS_Target=comp141284_c0_seq1 1375 1154 .;locus=RLOC_00023314
Chr2	stalkie_big_nohaplotig	exon	159214795	159216511	99	+	.	Parent=comp141284_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159215948	159216169	.	+	0	Parent=comp141284_c0_seq1.mrna1
Chr2	gffcl	locus	159219189	159220940	.	-	.	ID=RLOC_00023315;geneIDs=FBgn0039784.1.path1;transcripts=FBgn0039784.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159219189	159220940	.	-	.	ID=FBgn0039784.1.mrna1;geneID=FBgn0039784.1.path1;Name=FBgn0039784.1;Dir=sensecoverage=99.7;identity=99.9;matches=1396;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023315
Chr2	stalkie_big_nohaplotig	exon	159219189	159219259	100	-	.	Parent=FBgn0039784.1.mrna1;Target=FBgn0039784.1 1331 1401 +
Chr2	stalkie_big_nohaplotig	exon	159219318	159219483	99	-	.	Parent=FBgn0039784.1.mrna1;Target=FBgn0039784.1 1165 1330 +
Chr2	stalkie_big_nohaplotig	exon	159219538	159219597	100	-	.	Parent=FBgn0039784.1.mrna1;Target=FBgn0039784.1 1105 1164 +
Chr2	stalkie_big_nohaplotig	exon	159219658	159220131	100	-	.	Parent=FBgn0039784.1.mrna1;Target=FBgn0039784.1 631 1104 +
Chr2	stalkie_big_nohaplotig	exon	159220187	159220514	100	-	.	Parent=FBgn0039784.1.mrna1;Target=FBgn0039784.1 303 630 +
Chr2	stalkie_big_nohaplotig	exon	159220584	159220740	100	-	.	Parent=FBgn0039784.1.mrna1;Target=FBgn0039784.1 146 302 +
Chr2	stalkie_big_nohaplotig	exon	159220800	159220940	100	-	.	Parent=FBgn0039784.1.mrna1;Target=FBgn0039784.1 5 145 +
Chr2	stalkie_big_nohaplotig	CDS	159219189	159219259	.	-	2	Parent=FBgn0039784.1.mrna1;Target=FBgn0039784.1 1331 1401 +
Chr2	stalkie_big_nohaplotig	CDS	159219318	159219483	.	-	0	Parent=FBgn0039784.1.mrna1;Target=FBgn0039784.1 1165 1330 +
Chr2	stalkie_big_nohaplotig	CDS	159219538	159219597	.	-	0	Parent=FBgn0039784.1.mrna1;Target=FBgn0039784.1 1105 1164 +
Chr2	stalkie_big_nohaplotig	CDS	159219658	159220131	.	-	0	Parent=FBgn0039784.1.mrna1;Target=FBgn0039784.1 631 1104 +
Chr2	stalkie_big_nohaplotig	CDS	159220187	159220514	.	-	1	Parent=FBgn0039784.1.mrna1;Target=FBgn0039784.1 303 630 +
Chr2	stalkie_big_nohaplotig	CDS	159220584	159220740	.	-	2	Parent=FBgn0039784.1.mrna1;Target=FBgn0039784.1 146 302 +
Chr2	stalkie_big_nohaplotig	CDS	159220800	159220938	.	-	0	Parent=FBgn0039784.1.mrna1;Target=FBgn0039784.1 7 145 +
Chr2	gffcl	locus	159224076	159225738	.	-	.	ID=RLOC_00023316;geneIDs=FBgn0051015.1.path1;transcripts=FBgn0051015.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159224076	159225738	.	-	.	ID=FBgn0051015.1.mrna1;geneID=FBgn0051015.1.path1;Name=FBgn0051015.1;Dir=sensecoverage=100.0;identity=99.2;matches=1318;mismatches=10;indels=1;unknowns=0;Target=FBgn0051015.1 3 65 +;locus=RLOC_00023316
Chr2	stalkie_big_nohaplotig	exon	159224076	159224519	99	-	.	Parent=FBgn0051015.1.mrna1;Target=FBgn0051015.1 886 1329 +
Chr2	stalkie_big_nohaplotig	exon	159224579	159224706	99	-	.	Parent=FBgn0051015.1.mrna1;Target=FBgn0051015.1 758 885 +
Chr2	stalkie_big_nohaplotig	exon	159224770	159224957	99	-	.	Parent=FBgn0051015.1.mrna1;Target=FBgn0051015.1 570 757 +
Chr2	stalkie_big_nohaplotig	exon	159225042	159225192	98	-	.	Parent=FBgn0051015.1.mrna1;Target=FBgn0051015.1 419 569 +
Chr2	stalkie_big_nohaplotig	exon	159225268	159225419	99	-	.	Parent=FBgn0051015.1.mrna1;Target=FBgn0051015.1 267 418 +
Chr2	stalkie_big_nohaplotig	exon	159225474	159225738	99	-	.	Parent=FBgn0051015.1.mrna1;Target=FBgn0051015.1 1 266 +
Chr2	stalkie_big_nohaplotig	CDS	159225675	159225736	.	-	0	Parent=FBgn0051015.1.mrna1
Chr2	gffcl	locus	159226937	159233057	.	+	.	ID=RLOC_00023317;geneIDs=FBgn0051014.1.path1,FBgn0051014.2.path1;transcripts=FBgn0051014.1.mrna1,FBgn0051014.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159226937	159231217	.	+	.	ID=FBgn0051014.1.mrna1;geneID=FBgn0051014.1.path1;Name=FBgn0051014.1;Dir=sensecoverage=100.0;identity=100.0;matches=1698;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023317
Chr2	stalkie_big_nohaplotig	exon	159226937	159227133	100	+	.	Parent=FBgn0051014.1.mrna1;Target=FBgn0051014.1 1 197 +
Chr2	stalkie_big_nohaplotig	exon	159227215	159227369	100	+	.	Parent=FBgn0051014.1.mrna1;Target=FBgn0051014.1 198 352 +
Chr2	stalkie_big_nohaplotig	exon	159227434	159227796	100	+	.	Parent=FBgn0051014.1.mrna1;Target=FBgn0051014.1 353 715 +
Chr2	stalkie_big_nohaplotig	exon	159227861	159228009	100	+	.	Parent=FBgn0051014.1.mrna1;Target=FBgn0051014.1 716 864 +
Chr2	stalkie_big_nohaplotig	exon	159228079	159228522	100	+	.	Parent=FBgn0051014.1.mrna1;Target=FBgn0051014.1 865 1308 +
Chr2	stalkie_big_nohaplotig	exon	159228594	159228647	100	+	.	Parent=FBgn0051014.1.mrna1;Target=FBgn0051014.1 1309 1362 +
Chr2	stalkie_big_nohaplotig	exon	159228713	159228878	100	+	.	Parent=FBgn0051014.1.mrna1;Target=FBgn0051014.1 1363 1528 +
Chr2	stalkie_big_nohaplotig	exon	159229801	159229881	100	+	.	Parent=FBgn0051014.1.mrna1;Target=FBgn0051014.1 1529 1609 +
Chr2	stalkie_big_nohaplotig	exon	159231129	159231217	100	+	.	Parent=FBgn0051014.1.mrna1;Target=FBgn0051014.1 1610 1698 +
Chr2	stalkie_big_nohaplotig	CDS	159226937	159227133	.	+	0	Parent=FBgn0051014.1.mrna1;Target=FBgn0051014.1 1 197 +
Chr2	stalkie_big_nohaplotig	CDS	159227215	159227369	.	+	1	Parent=FBgn0051014.1.mrna1;Target=FBgn0051014.1 198 352 +
Chr2	stalkie_big_nohaplotig	CDS	159227434	159227796	.	+	2	Parent=FBgn0051014.1.mrna1;Target=FBgn0051014.1 353 715 +
Chr2	stalkie_big_nohaplotig	CDS	159227861	159228009	.	+	2	Parent=FBgn0051014.1.mrna1;Target=FBgn0051014.1 716 864 +
Chr2	stalkie_big_nohaplotig	CDS	159228079	159228522	.	+	0	Parent=FBgn0051014.1.mrna1;Target=FBgn0051014.1 865 1308 +
Chr2	stalkie_big_nohaplotig	CDS	159228594	159228647	.	+	0	Parent=FBgn0051014.1.mrna1;Target=FBgn0051014.1 1309 1362 +
Chr2	stalkie_big_nohaplotig	CDS	159228713	159228878	.	+	0	Parent=FBgn0051014.1.mrna1;Target=FBgn0051014.1 1363 1528 +
Chr2	stalkie_big_nohaplotig	CDS	159229801	159229881	.	+	2	Parent=FBgn0051014.1.mrna1;Target=FBgn0051014.1 1529 1609 +
Chr2	stalkie_big_nohaplotig	CDS	159231129	159231217	.	+	2	Parent=FBgn0051014.1.mrna1;Target=FBgn0051014.1 1610 1698 +
Chr2	stalkie_big_nohaplotig	mRNA	159229841	159233057	.	+	.	ID=FBgn0051014.2.mrna1;geneID=FBgn0051014.2.path1;Name=FBgn0051014.2;Dir=sensecoverage=100.0;identity=100.0;matches=1497;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023317
Chr2	stalkie_big_nohaplotig	exon	159229841	159229881	100	+	.	Parent=FBgn0051014.2.mrna1;Target=FBgn0051014.2 1 41 +
Chr2	stalkie_big_nohaplotig	exon	159231129	159231283	100	+	.	Parent=FBgn0051014.2.mrna1;Target=FBgn0051014.2 42 196 +
Chr2	stalkie_big_nohaplotig	exon	159231340	159231493	100	+	.	Parent=FBgn0051014.2.mrna1;Target=FBgn0051014.2 197 350 +
Chr2	stalkie_big_nohaplotig	exon	159231555	159231760	100	+	.	Parent=FBgn0051014.2.mrna1;Target=FBgn0051014.2 351 556 +
Chr2	stalkie_big_nohaplotig	exon	159231833	159231999	100	+	.	Parent=FBgn0051014.2.mrna1;Target=FBgn0051014.2 557 723 +
Chr2	stalkie_big_nohaplotig	exon	159232067	159232525	100	+	.	Parent=FBgn0051014.2.mrna1;Target=FBgn0051014.2 724 1182 +
Chr2	stalkie_big_nohaplotig	exon	159232588	159232641	100	+	.	Parent=FBgn0051014.2.mrna1;Target=FBgn0051014.2 1183 1236 +
Chr2	stalkie_big_nohaplotig	exon	159232747	159232912	100	+	.	Parent=FBgn0051014.2.mrna1;Target=FBgn0051014.2 1237 1402 +
Chr2	stalkie_big_nohaplotig	exon	159232963	159233057	100	+	.	Parent=FBgn0051014.2.mrna1;Target=FBgn0051014.2 1403 1497 +
Chr2	stalkie_big_nohaplotig	CDS	159229841	159229881	.	+	0	Parent=FBgn0051014.2.mrna1;Target=FBgn0051014.2 1 41 +
Chr2	stalkie_big_nohaplotig	CDS	159231129	159231283	.	+	1	Parent=FBgn0051014.2.mrna1;Target=FBgn0051014.2 42 196 +
Chr2	stalkie_big_nohaplotig	CDS	159231340	159231493	.	+	2	Parent=FBgn0051014.2.mrna1;Target=FBgn0051014.2 197 350 +
Chr2	stalkie_big_nohaplotig	CDS	159231555	159231760	.	+	1	Parent=FBgn0051014.2.mrna1;Target=FBgn0051014.2 351 556 +
Chr2	stalkie_big_nohaplotig	CDS	159231833	159231999	.	+	2	Parent=FBgn0051014.2.mrna1;Target=FBgn0051014.2 557 723 +
Chr2	stalkie_big_nohaplotig	CDS	159232067	159232525	.	+	0	Parent=FBgn0051014.2.mrna1;Target=FBgn0051014.2 724 1182 +
Chr2	stalkie_big_nohaplotig	CDS	159232588	159232641	.	+	0	Parent=FBgn0051014.2.mrna1;Target=FBgn0051014.2 1183 1236 +
Chr2	stalkie_big_nohaplotig	CDS	159232747	159232912	.	+	0	Parent=FBgn0051014.2.mrna1;Target=FBgn0051014.2 1237 1402 +
Chr2	stalkie_big_nohaplotig	CDS	159232963	159233057	.	+	2	Parent=FBgn0051014.2.mrna1;Target=FBgn0051014.2 1403 1497 +
Chr2	gffcl	locus	159233355	159234727	.	+	.	ID=RLOC_00023318;geneIDs=FBgn0051014.3.path1;transcripts=FBgn0051014.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159233355	159234727	.	+	.	ID=FBgn0051014.3.mrna1;geneID=FBgn0051014.3.path1;Name=FBgn0051014.3;Dir=sensecoverage=100.0;identity=100.0;matches=1065;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023318
Chr2	stalkie_big_nohaplotig	exon	159233355	159233557	100	+	.	Parent=FBgn0051014.3.mrna1;Target=FBgn0051014.3 1 203 +
Chr2	stalkie_big_nohaplotig	exon	159233616	159233770	100	+	.	Parent=FBgn0051014.3.mrna1;Target=FBgn0051014.3 204 358 +
Chr2	stalkie_big_nohaplotig	exon	159233829	159233997	100	+	.	Parent=FBgn0051014.3.mrna1;Target=FBgn0051014.3 359 527 +
Chr2	stalkie_big_nohaplotig	exon	159234053	159234243	100	+	.	Parent=FBgn0051014.3.mrna1;Target=FBgn0051014.3 528 718 +
Chr2	stalkie_big_nohaplotig	exon	159234309	159234439	100	+	.	Parent=FBgn0051014.3.mrna1;Target=FBgn0051014.3 719 849 +
Chr2	stalkie_big_nohaplotig	exon	159234512	159234727	100	+	.	Parent=FBgn0051014.3.mrna1;Target=FBgn0051014.3 850 1065 +
Chr2	stalkie_big_nohaplotig	CDS	159233355	159233557	.	+	0	Parent=FBgn0051014.3.mrna1;Target=FBgn0051014.3 1 203 +
Chr2	stalkie_big_nohaplotig	CDS	159233616	159233770	.	+	1	Parent=FBgn0051014.3.mrna1;Target=FBgn0051014.3 204 358 +
Chr2	stalkie_big_nohaplotig	CDS	159233829	159233997	.	+	2	Parent=FBgn0051014.3.mrna1;Target=FBgn0051014.3 359 527 +
Chr2	stalkie_big_nohaplotig	CDS	159234053	159234243	.	+	1	Parent=FBgn0051014.3.mrna1;Target=FBgn0051014.3 528 718 +
Chr2	stalkie_big_nohaplotig	CDS	159234309	159234439	.	+	2	Parent=FBgn0051014.3.mrna1;Target=FBgn0051014.3 719 849 +
Chr2	stalkie_big_nohaplotig	CDS	159234512	159234727	.	+	0	Parent=FBgn0051014.3.mrna1;Target=FBgn0051014.3 850 1065 +
Chr2	gffcl	locus	159236018	159237949	.	+	.	ID=RLOC_00023319;geneIDs=FBgn0051371.1.path1;transcripts=FBgn0051371.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159236018	159237949	.	+	.	ID=FBgn0051371.1.mrna1;geneID=FBgn0051371.1.path1;Name=FBgn0051371.1;Dir=sensecoverage=100.0;identity=99.9;matches=1472;mismatches=0;indels=1;unknowns=0;Target=FBgn0051371.1 3 68 +;locus=RLOC_00023319
Chr2	stalkie_big_nohaplotig	exon	159236018	159236195	99	+	.	Parent=FBgn0051371.1.mrna1;Target=FBgn0051371.1 1 179 +
Chr2	stalkie_big_nohaplotig	exon	159236256	159236410	100	+	.	Parent=FBgn0051371.1.mrna1;Target=FBgn0051371.1 180 334 +
Chr2	stalkie_big_nohaplotig	exon	159236478	159236631	100	+	.	Parent=FBgn0051371.1.mrna1;Target=FBgn0051371.1 335 488 +
Chr2	stalkie_big_nohaplotig	exon	159236701	159236894	100	+	.	Parent=FBgn0051371.1.mrna1;Target=FBgn0051371.1 489 682 +
Chr2	stalkie_big_nohaplotig	exon	159236946	159237088	100	+	.	Parent=FBgn0051371.1.mrna1;Target=FBgn0051371.1 683 825 +
Chr2	stalkie_big_nohaplotig	exon	159237167	159237619	100	+	.	Parent=FBgn0051371.1.mrna1;Target=FBgn0051371.1 826 1278 +
Chr2	stalkie_big_nohaplotig	exon	159237686	159237851	100	+	.	Parent=FBgn0051371.1.mrna1;Target=FBgn0051371.1 1279 1444 +
Chr2	stalkie_big_nohaplotig	exon	159237921	159237949	100	+	.	Parent=FBgn0051371.1.mrna1;Target=FBgn0051371.1 1445 1473 +
Chr2	stalkie_big_nohaplotig	CDS	159236020	159236084	.	+	0	Parent=FBgn0051371.1.mrna1
Chr2	gffcl	locus	159239270	159242443	.	+	.	ID=RLOC_00023320;geneIDs=FBgn0026190.1.path1;transcripts=FBgn0026190.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159239270	159242443	.	+	.	ID=FBgn0026190.1.mrna1;geneID=FBgn0026190.1.path1;Name=FBgn0026190.1;Dir=sensecoverage=100.0;identity=100.0;matches=1701;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023320
Chr2	stalkie_big_nohaplotig	exon	159239270	159239538	100	+	.	Parent=FBgn0026190.1.mrna1;Target=FBgn0026190.1 1 269 +
Chr2	stalkie_big_nohaplotig	exon	159240420	159240574	100	+	.	Parent=FBgn0026190.1.mrna1;Target=FBgn0026190.1 270 424 +
Chr2	stalkie_big_nohaplotig	exon	159240727	159240883	100	+	.	Parent=FBgn0026190.1.mrna1;Target=FBgn0026190.1 425 581 +
Chr2	stalkie_big_nohaplotig	exon	159240939	159241120	100	+	.	Parent=FBgn0026190.1.mrna1;Target=FBgn0026190.1 582 763 +
Chr2	stalkie_big_nohaplotig	exon	159241178	159241338	100	+	.	Parent=FBgn0026190.1.mrna1;Target=FBgn0026190.1 764 924 +
Chr2	stalkie_big_nohaplotig	exon	159241488	159241943	100	+	.	Parent=FBgn0026190.1.mrna1;Target=FBgn0026190.1 925 1380 +
Chr2	stalkie_big_nohaplotig	exon	159242009	159242065	100	+	.	Parent=FBgn0026190.1.mrna1;Target=FBgn0026190.1 1381 1437 +
Chr2	stalkie_big_nohaplotig	exon	159242129	159242294	100	+	.	Parent=FBgn0026190.1.mrna1;Target=FBgn0026190.1 1438 1603 +
Chr2	stalkie_big_nohaplotig	exon	159242346	159242443	100	+	.	Parent=FBgn0026190.1.mrna1;Target=FBgn0026190.1 1604 1701 +
Chr2	stalkie_big_nohaplotig	CDS	159239270	159239538	.	+	0	Parent=FBgn0026190.1.mrna1;Target=FBgn0026190.1 1 269 +
Chr2	stalkie_big_nohaplotig	CDS	159240420	159240574	.	+	1	Parent=FBgn0026190.1.mrna1;Target=FBgn0026190.1 270 424 +
Chr2	stalkie_big_nohaplotig	CDS	159240727	159240883	.	+	2	Parent=FBgn0026190.1.mrna1;Target=FBgn0026190.1 425 581 +
Chr2	stalkie_big_nohaplotig	CDS	159240939	159241120	.	+	1	Parent=FBgn0026190.1.mrna1;Target=FBgn0026190.1 582 763 +
Chr2	stalkie_big_nohaplotig	CDS	159241178	159241338	.	+	2	Parent=FBgn0026190.1.mrna1;Target=FBgn0026190.1 764 924 +
Chr2	stalkie_big_nohaplotig	CDS	159241488	159241943	.	+	0	Parent=FBgn0026190.1.mrna1;Target=FBgn0026190.1 925 1380 +
Chr2	stalkie_big_nohaplotig	CDS	159242009	159242065	.	+	0	Parent=FBgn0026190.1.mrna1;Target=FBgn0026190.1 1381 1437 +
Chr2	stalkie_big_nohaplotig	CDS	159242129	159242294	.	+	0	Parent=FBgn0026190.1.mrna1;Target=FBgn0026190.1 1438 1603 +
Chr2	stalkie_big_nohaplotig	CDS	159242346	159242443	.	+	2	Parent=FBgn0026190.1.mrna1;Target=FBgn0026190.1 1604 1701 +
Chr2	gffcl	locus	159242548	159244696	.	-	.	ID=RLOC_00023321;geneIDs=FBgn0039779.1.path1;transcripts=FBgn0039779.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159242548	159244696	.	-	.	ID=FBgn0039779.1.mrna1;geneID=FBgn0039779.1.path1;Name=FBgn0039779.1;Dir=sensecoverage=100.0;identity=99.9;matches=1586;mismatches=0;indels=1;unknowns=0;Target=FBgn0039779.1 3 77 +;locus=RLOC_00023321
Chr2	stalkie_big_nohaplotig	exon	159242548	159242636	100	-	.	Parent=FBgn0039779.1.mrna1;Target=FBgn0039779.1 1499 1587 +
Chr2	stalkie_big_nohaplotig	exon	159242719	159242884	100	-	.	Parent=FBgn0039779.1.mrna1;Target=FBgn0039779.1 1333 1498 +
Chr2	stalkie_big_nohaplotig	exon	159242939	159243001	100	-	.	Parent=FBgn0039779.1.mrna1;Target=FBgn0039779.1 1270 1332 +
Chr2	stalkie_big_nohaplotig	exon	159243114	159243873	100	-	.	Parent=FBgn0039779.1.mrna1;Target=FBgn0039779.1 510 1269 +
Chr2	stalkie_big_nohaplotig	exon	159243943	159244099	100	-	.	Parent=FBgn0039779.1.mrna1;Target=FBgn0039779.1 353 509 +
Chr2	stalkie_big_nohaplotig	exon	159244217	159244371	100	-	.	Parent=FBgn0039779.1.mrna1;Target=FBgn0039779.1 198 352 +
Chr2	stalkie_big_nohaplotig	exon	159244501	159244696	99	-	.	Parent=FBgn0039779.1.mrna1;Target=FBgn0039779.1 1 197 +
Chr2	stalkie_big_nohaplotig	CDS	159244621	159244694	.	-	0	Parent=FBgn0039779.1.mrna1
Chr2	gffcl	locus	159245617	159260856	.	-	.	ID=RLOC_00023322;geneIDs=FBgn0039776.1.path1;transcripts=FBgn0039776.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159245617	159260856	.	-	.	ID=FBgn0039776.1.mrna1;geneID=FBgn0039776.1.path1;Name=FBgn0039776.1;Dir=sensecoverage=100.0;identity=100.0;matches=1704;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023322
Chr2	stalkie_big_nohaplotig	exon	159245617	159245699	100	-	.	Parent=FBgn0039776.1.mrna1;Target=FBgn0039776.1 1622 1704 +
Chr2	stalkie_big_nohaplotig	exon	159245759	159245924	100	-	.	Parent=FBgn0039776.1.mrna1;Target=FBgn0039776.1 1456 1621 +
Chr2	stalkie_big_nohaplotig	exon	159246001	159246066	100	-	.	Parent=FBgn0039776.1.mrna1;Target=FBgn0039776.1 1390 1455 +
Chr2	stalkie_big_nohaplotig	exon	159246186	159246668	100	-	.	Parent=FBgn0039776.1.mrna1;Target=FBgn0039776.1 907 1389 +
Chr2	stalkie_big_nohaplotig	exon	159246740	159246909	100	-	.	Parent=FBgn0039776.1.mrna1;Target=FBgn0039776.1 737 906 +
Chr2	stalkie_big_nohaplotig	exon	159247116	159247303	100	-	.	Parent=FBgn0039776.1.mrna1;Target=FBgn0039776.1 549 736 +
Chr2	stalkie_big_nohaplotig	exon	159247410	159247566	100	-	.	Parent=FBgn0039776.1.mrna1;Target=FBgn0039776.1 392 548 +
Chr2	stalkie_big_nohaplotig	exon	159247638	159247789	100	-	.	Parent=FBgn0039776.1.mrna1;Target=FBgn0039776.1 240 391 +
Chr2	stalkie_big_nohaplotig	exon	159252146	159252365	100	-	.	Parent=FBgn0039776.1.mrna1;Target=FBgn0039776.1 20 239 +
Chr2	stalkie_big_nohaplotig	exon	159260838	159260856	100	-	.	Parent=FBgn0039776.1.mrna1;Target=FBgn0039776.1 1 19 +
Chr2	stalkie_big_nohaplotig	CDS	159245617	159245699	.	-	2	Parent=FBgn0039776.1.mrna1;Target=FBgn0039776.1 1622 1704 +
Chr2	stalkie_big_nohaplotig	CDS	159245759	159245924	.	-	0	Parent=FBgn0039776.1.mrna1;Target=FBgn0039776.1 1456 1621 +
Chr2	stalkie_big_nohaplotig	CDS	159246001	159246066	.	-	0	Parent=FBgn0039776.1.mrna1;Target=FBgn0039776.1 1390 1455 +
Chr2	stalkie_big_nohaplotig	CDS	159246186	159246668	.	-	0	Parent=FBgn0039776.1.mrna1;Target=FBgn0039776.1 907 1389 +
Chr2	stalkie_big_nohaplotig	CDS	159246740	159246909	.	-	2	Parent=FBgn0039776.1.mrna1;Target=FBgn0039776.1 737 906 +
Chr2	stalkie_big_nohaplotig	CDS	159247116	159247303	.	-	1	Parent=FBgn0039776.1.mrna1;Target=FBgn0039776.1 549 736 +
Chr2	stalkie_big_nohaplotig	CDS	159247410	159247566	.	-	2	Parent=FBgn0039776.1.mrna1;Target=FBgn0039776.1 392 548 +
Chr2	stalkie_big_nohaplotig	CDS	159247638	159247789	.	-	1	Parent=FBgn0039776.1.mrna1;Target=FBgn0039776.1 240 391 +
Chr2	stalkie_big_nohaplotig	CDS	159252146	159252365	.	-	2	Parent=FBgn0039776.1.mrna1;Target=FBgn0039776.1 20 239 +
Chr2	stalkie_big_nohaplotig	CDS	159260838	159260856	.	-	0	Parent=FBgn0039776.1.mrna1;Target=FBgn0039776.1 1 19 +
Chr2	gffcl	locus	159249038	159250915	.	-	.	ID=RLOC_00023323;geneIDs=FBgn0260440.1.path1;transcripts=FBgn0260440.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159249038	159250915	.	-	.	ID=FBgn0260440.1.mrna1;geneID=FBgn0260440.1.path1;Name=FBgn0260440.1;Dir=sensecoverage=100.0;identity=99.9;matches=1817;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023323
Chr2	stalkie_big_nohaplotig	exon	159249038	159249370	100	-	.	Parent=FBgn0260440.1.mrna1;Target=FBgn0260440.1 1486 1818 +
Chr2	stalkie_big_nohaplotig	exon	159249431	159250915	99	-	.	Parent=FBgn0260440.1.mrna1;Target=FBgn0260440.1 1 1485 +
Chr2	stalkie_big_nohaplotig	CDS	159249038	159249370	.	-	0	Parent=FBgn0260440.1.mrna1;Target=FBgn0260440.1 1486 1818 +
Chr2	stalkie_big_nohaplotig	CDS	159249431	159250915	.	-	0	Parent=FBgn0260440.1.mrna1;Target=FBgn0260440.1 1 1485 +
Chr2	gffcl	locus	159262008	159264603	.	-	.	ID=RLOC_00023324;geneIDs=FBgn0039774.1.path1;transcripts=FBgn0039774.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159262008	159264603	.	-	.	ID=FBgn0039774.1.mrna1;geneID=FBgn0039774.1.path1;Name=FBgn0039774.1;Dir=sensecoverage=100.0;identity=99.9;matches=2119;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023324
Chr2	stalkie_big_nohaplotig	exon	159262008	159262188	99	-	.	Parent=FBgn0039774.1.mrna1;Target=FBgn0039774.1 1941 2121 +
Chr2	stalkie_big_nohaplotig	exon	159262242	159262621	100	-	.	Parent=FBgn0039774.1.mrna1;Target=FBgn0039774.1 1561 1940 +
Chr2	stalkie_big_nohaplotig	exon	159262682	159262912	100	-	.	Parent=FBgn0039774.1.mrna1;Target=FBgn0039774.1 1330 1560 +
Chr2	stalkie_big_nohaplotig	exon	159262966	159263295	100	-	.	Parent=FBgn0039774.1.mrna1;Target=FBgn0039774.1 1000 1329 +
Chr2	stalkie_big_nohaplotig	exon	159263353	159263562	100	-	.	Parent=FBgn0039774.1.mrna1;Target=FBgn0039774.1 790 999 +
Chr2	stalkie_big_nohaplotig	exon	159263620	159263946	99	-	.	Parent=FBgn0039774.1.mrna1;Target=FBgn0039774.1 463 789 +
Chr2	stalkie_big_nohaplotig	exon	159264019	159264195	100	-	.	Parent=FBgn0039774.1.mrna1;Target=FBgn0039774.1 286 462 +
Chr2	stalkie_big_nohaplotig	exon	159264256	159264402	100	-	.	Parent=FBgn0039774.1.mrna1;Target=FBgn0039774.1 139 285 +
Chr2	stalkie_big_nohaplotig	exon	159264466	159264603	100	-	.	Parent=FBgn0039774.1.mrna1;Target=FBgn0039774.1 1 138 +
Chr2	stalkie_big_nohaplotig	CDS	159262008	159262188	.	-	1	Parent=FBgn0039774.1.mrna1;Target=FBgn0039774.1 1941 2121 +
Chr2	stalkie_big_nohaplotig	CDS	159262242	159262621	.	-	0	Parent=FBgn0039774.1.mrna1;Target=FBgn0039774.1 1561 1940 +
Chr2	stalkie_big_nohaplotig	CDS	159262682	159262912	.	-	0	Parent=FBgn0039774.1.mrna1;Target=FBgn0039774.1 1330 1560 +
Chr2	stalkie_big_nohaplotig	CDS	159262966	159263295	.	-	0	Parent=FBgn0039774.1.mrna1;Target=FBgn0039774.1 1000 1329 +
Chr2	stalkie_big_nohaplotig	CDS	159263353	159263562	.	-	0	Parent=FBgn0039774.1.mrna1;Target=FBgn0039774.1 790 999 +
Chr2	stalkie_big_nohaplotig	CDS	159263620	159263946	.	-	0	Parent=FBgn0039774.1.mrna1;Target=FBgn0039774.1 463 789 +
Chr2	stalkie_big_nohaplotig	CDS	159264019	159264195	.	-	0	Parent=FBgn0039774.1.mrna1;Target=FBgn0039774.1 286 462 +
Chr2	stalkie_big_nohaplotig	CDS	159264256	159264402	.	-	0	Parent=FBgn0039774.1.mrna1;Target=FBgn0039774.1 139 285 +
Chr2	stalkie_big_nohaplotig	CDS	159264466	159264603	.	-	0	Parent=FBgn0039774.1.mrna1;Target=FBgn0039774.1 1 138 +
Chr2	gffcl	locus	159268391	159270134	.	+	.	ID=RLOC_00023325;geneIDs=FBgn0039773.1.path1;transcripts=FBgn0039773.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159268391	159270134	.	+	.	ID=FBgn0039773.1.mrna1;geneID=FBgn0039773.1.path1;Name=FBgn0039773.1;Dir=sensecoverage=100.0;identity=99.9;matches=1262;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023325
Chr2	stalkie_big_nohaplotig	exon	159268391	159268530	100	+	.	Parent=FBgn0039773.1.mrna1;Target=FBgn0039773.1 1 140 +
Chr2	stalkie_big_nohaplotig	exon	159268790	159269314	100	+	.	Parent=FBgn0039773.1.mrna1;Target=FBgn0039773.1 141 665 +
Chr2	stalkie_big_nohaplotig	exon	159269419	159269740	100	+	.	Parent=FBgn0039773.1.mrna1;Target=FBgn0039773.1 666 987 +
Chr2	stalkie_big_nohaplotig	exon	159269804	159269916	100	+	.	Parent=FBgn0039773.1.mrna1;Target=FBgn0039773.1 988 1100 +
Chr2	stalkie_big_nohaplotig	exon	159269972	159270134	99	+	.	Parent=FBgn0039773.1.mrna1;Target=FBgn0039773.1 1101 1263 +
Chr2	stalkie_big_nohaplotig	CDS	159268391	159268530	.	+	0	Parent=FBgn0039773.1.mrna1;Target=FBgn0039773.1 1 140 +
Chr2	stalkie_big_nohaplotig	CDS	159268790	159269314	.	+	1	Parent=FBgn0039773.1.mrna1;Target=FBgn0039773.1 141 665 +
Chr2	stalkie_big_nohaplotig	CDS	159269419	159269740	.	+	1	Parent=FBgn0039773.1.mrna1;Target=FBgn0039773.1 666 987 +
Chr2	stalkie_big_nohaplotig	CDS	159269804	159269916	.	+	0	Parent=FBgn0039773.1.mrna1;Target=FBgn0039773.1 988 1100 +
Chr2	stalkie_big_nohaplotig	CDS	159269972	159270134	.	+	1	Parent=FBgn0039773.1.mrna1;Target=FBgn0039773.1 1101 1263 +
Chr2	gffcl	locus	159274952	159287649	.	+	.	ID=RLOC_00023326;geneIDs=FBgn0028646.1.path1,comp116366_c0_seq1.path1;transcripts=FBgn0028646.1.mrna1,comp116366_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159274952	159287649	.	+	.	ID=FBgn0028646.1.mrna1;geneID=FBgn0028646.1.path1;Name=FBgn0028646.1;Dir=sensecoverage=100.0;identity=100.0;matches=2079;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023326
Chr2	stalkie_big_nohaplotig	exon	159274952	159275023	100	+	.	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 1 72 +
Chr2	stalkie_big_nohaplotig	exon	159283535	159283687	100	+	.	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 73 225 +
Chr2	stalkie_big_nohaplotig	exon	159284138	159284300	100	+	.	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 226 388 +
Chr2	stalkie_big_nohaplotig	exon	159284418	159284509	100	+	.	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 389 480 +
Chr2	stalkie_big_nohaplotig	exon	159284570	159284764	100	+	.	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 481 675 +
Chr2	stalkie_big_nohaplotig	exon	159284817	159285040	100	+	.	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 676 899 +
Chr2	stalkie_big_nohaplotig	exon	159285784	159285950	100	+	.	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 900 1066 +
Chr2	stalkie_big_nohaplotig	exon	159286020	159286138	100	+	.	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 1067 1185 +
Chr2	stalkie_big_nohaplotig	exon	159286212	159286382	100	+	.	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 1186 1356 +
Chr2	stalkie_big_nohaplotig	exon	159286797	159287032	100	+	.	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 1357 1592 +
Chr2	stalkie_big_nohaplotig	exon	159287090	159287292	100	+	.	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 1593 1795 +
Chr2	stalkie_big_nohaplotig	exon	159287366	159287649	100	+	.	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 1796 2079 +
Chr2	stalkie_big_nohaplotig	CDS	159274952	159275023	.	+	0	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 1 72 +
Chr2	stalkie_big_nohaplotig	CDS	159283535	159283687	.	+	0	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 73 225 +
Chr2	stalkie_big_nohaplotig	CDS	159284138	159284300	.	+	0	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 226 388 +
Chr2	stalkie_big_nohaplotig	CDS	159284418	159284509	.	+	2	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 389 480 +
Chr2	stalkie_big_nohaplotig	CDS	159284570	159284764	.	+	0	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 481 675 +
Chr2	stalkie_big_nohaplotig	CDS	159284817	159285040	.	+	0	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 676 899 +
Chr2	stalkie_big_nohaplotig	CDS	159285784	159285950	.	+	1	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 900 1066 +
Chr2	stalkie_big_nohaplotig	CDS	159286020	159286138	.	+	2	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 1067 1185 +
Chr2	stalkie_big_nohaplotig	CDS	159286212	159286382	.	+	0	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 1186 1356 +
Chr2	stalkie_big_nohaplotig	CDS	159286797	159287032	.	+	0	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 1357 1592 +
Chr2	stalkie_big_nohaplotig	CDS	159287090	159287292	.	+	1	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 1593 1795 +
Chr2	stalkie_big_nohaplotig	CDS	159287366	159287649	.	+	2	Parent=FBgn0028646.1.mrna1;Target=FBgn0028646.1 1796 2079 +
Chr2	stalkie_big_nohaplotig	mRNA	159283269	159283558	.	+	.	ID=comp116366_c0_seq1.mrna1;geneID=comp116366_c0_seq1.path1;Name=comp116366_c0_seq1;Dir=antisensecoverage=100.0;identity=100.0;matches=221;mismatches=0;indels=0;unknowns=0;Target=comp116366_c0_seq1 169 219 .;locus=RLOC_00023326
Chr2	stalkie_big_nohaplotig	exon	159283269	159283465	100	+	.	Parent=comp116366_c0_seq1.mrna1;Target=comp116366_c0_seq1 25 221 -
Chr2	stalkie_big_nohaplotig	exon	159283535	159283558	100	+	.	Parent=comp116366_c0_seq1.mrna1;Target=comp116366_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	CDS	159283271	159283321	.	+	0	Parent=comp116366_c0_seq1.mrna1
Chr2	gffcl	locus	159277503	159277875	.	+	.	ID=RLOC_00023327;geneIDs=comp116616_c0_seq1.path1;transcripts=comp116616_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159277503	159277875	.	+	.	ID=comp116616_c0_seq1.mrna1;geneID=comp116616_c0_seq1.path1;Name=comp116616_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=372;mismatches=1;indels=0;unknowns=0;Target=comp116616_c0_seq1 373 1 .;CDS_Target=comp116616_c0_seq1 92 54 .;locus=RLOC_00023327
Chr2	stalkie_big_nohaplotig	exon	159277503	159277875	99	+	.	Parent=comp116616_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159277556	159277594	.	+	0	Parent=comp116616_c0_seq1.mrna1
Chr2	gffcl	locus	159291190	159292363	.	+	.	ID=RLOC_00023328;geneIDs=FBgn0039771.1.path1;transcripts=FBgn0039771.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159291190	159292363	.	+	.	ID=FBgn0039771.1.mrna1;geneID=FBgn0039771.1.path1;Name=FBgn0039771.1;Dir=sensecoverage=100.0;identity=99.9;matches=875;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023328
Chr2	stalkie_big_nohaplotig	exon	159291190	159291417	100	+	.	Parent=FBgn0039771.1.mrna1;Target=FBgn0039771.1 1 228 +
Chr2	stalkie_big_nohaplotig	exon	159291505	159291644	100	+	.	Parent=FBgn0039771.1.mrna1;Target=FBgn0039771.1 229 368 +
Chr2	stalkie_big_nohaplotig	exon	159291732	159291886	99	+	.	Parent=FBgn0039771.1.mrna1;Target=FBgn0039771.1 369 523 +
Chr2	stalkie_big_nohaplotig	exon	159291954	159292159	100	+	.	Parent=FBgn0039771.1.mrna1;Target=FBgn0039771.1 524 729 +
Chr2	stalkie_big_nohaplotig	exon	159292217	159292363	100	+	.	Parent=FBgn0039771.1.mrna1;Target=FBgn0039771.1 730 876 +
Chr2	stalkie_big_nohaplotig	CDS	159291190	159291417	.	+	0	Parent=FBgn0039771.1.mrna1;Target=FBgn0039771.1 1 228 +
Chr2	stalkie_big_nohaplotig	CDS	159291505	159291644	.	+	0	Parent=FBgn0039771.1.mrna1;Target=FBgn0039771.1 229 368 +
Chr2	stalkie_big_nohaplotig	CDS	159291732	159291886	.	+	1	Parent=FBgn0039771.1.mrna1;Target=FBgn0039771.1 369 523 +
Chr2	stalkie_big_nohaplotig	CDS	159291954	159292159	.	+	2	Parent=FBgn0039771.1.mrna1;Target=FBgn0039771.1 524 729 +
Chr2	stalkie_big_nohaplotig	CDS	159292217	159292363	.	+	0	Parent=FBgn0039771.1.mrna1;Target=FBgn0039771.1 730 876 +
Chr2	gffcl	locus	159292455	159292902	.	+	.	ID=RLOC_00023329;geneIDs=comp379738_c0_seq1.path1;transcripts=comp379738_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159292455	159292902	.	+	.	ID=comp379738_c0_seq1.mrna1;geneID=comp379738_c0_seq1.path1;Name=comp379738_c0_seq1;Dir=indeterminatecoverage=99.8;identity=100.0;matches=448;mismatches=0;indels=0;unknowns=0;Target=comp379738_c0_seq1 449 2 .;CDS_Target=comp379738_c0_seq1 246 133 .;locus=RLOC_00023329
Chr2	stalkie_big_nohaplotig	exon	159292455	159292902	100	+	.	Parent=comp379738_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159292586	159292699	.	+	0	Parent=comp379738_c0_seq1.mrna1
Chr2	gffcl	locus	159299578	159300211	.	+	.	ID=RLOC_00023330;geneIDs=comp117886_c0_seq1.path1;transcripts=comp117886_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159299578	159300211	.	+	.	ID=comp117886_c0_seq1.mrna1;geneID=comp117886_c0_seq1.path1;Name=comp117886_c0_seq1;Dir=indeterminatecoverage=99.2;identity=99.4;matches=630;mismatches=4;indels=0;unknowns=0;Target=comp117886_c0_seq1 638 5 .;CDS_Target=comp117886_c0_seq1 85 5 .;locus=RLOC_00023330
Chr2	stalkie_big_nohaplotig	exon	159299578	159300211	99	+	.	Parent=comp117886_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159299578	159299658	.	+	0	Parent=comp117886_c0_seq1.mrna1
Chr2	gffcl	locus	159304625	159310173	.	+	.	ID=RLOC_00023331;geneIDs=FBgn0039770.1.path1;transcripts=FBgn0039770.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159304625	159310173	.	+	.	ID=FBgn0039770.1.mrna1;geneID=FBgn0039770.1.path1;Name=FBgn0039770.1;Dir=sensecoverage=100.0;identity=100.0;matches=921;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023331
Chr2	stalkie_big_nohaplotig	exon	159304625	159304645	100	+	.	Parent=FBgn0039770.1.mrna1;Target=FBgn0039770.1 1 21 +
Chr2	stalkie_big_nohaplotig	exon	159305381	159305447	100	+	.	Parent=FBgn0039770.1.mrna1;Target=FBgn0039770.1 22 88 +
Chr2	stalkie_big_nohaplotig	exon	159306562	159306767	100	+	.	Parent=FBgn0039770.1.mrna1;Target=FBgn0039770.1 89 294 +
Chr2	stalkie_big_nohaplotig	exon	159306829	159306935	100	+	.	Parent=FBgn0039770.1.mrna1;Target=FBgn0039770.1 295 401 +
Chr2	stalkie_big_nohaplotig	exon	159306996	159307114	100	+	.	Parent=FBgn0039770.1.mrna1;Target=FBgn0039770.1 402 520 +
Chr2	stalkie_big_nohaplotig	exon	159307171	159307331	100	+	.	Parent=FBgn0039770.1.mrna1;Target=FBgn0039770.1 521 681 +
Chr2	stalkie_big_nohaplotig	exon	159307385	159307487	100	+	.	Parent=FBgn0039770.1.mrna1;Target=FBgn0039770.1 682 784 +
Chr2	stalkie_big_nohaplotig	exon	159310037	159310173	100	+	.	Parent=FBgn0039770.1.mrna1;Target=FBgn0039770.1 785 921 +
Chr2	stalkie_big_nohaplotig	CDS	159304625	159304645	.	+	0	Parent=FBgn0039770.1.mrna1;Target=FBgn0039770.1 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	159305381	159305447	.	+	0	Parent=FBgn0039770.1.mrna1;Target=FBgn0039770.1 22 88 +
Chr2	stalkie_big_nohaplotig	CDS	159306562	159306767	.	+	2	Parent=FBgn0039770.1.mrna1;Target=FBgn0039770.1 89 294 +
Chr2	stalkie_big_nohaplotig	CDS	159306829	159306935	.	+	0	Parent=FBgn0039770.1.mrna1;Target=FBgn0039770.1 295 401 +
Chr2	stalkie_big_nohaplotig	CDS	159306996	159307114	.	+	1	Parent=FBgn0039770.1.mrna1;Target=FBgn0039770.1 402 520 +
Chr2	stalkie_big_nohaplotig	CDS	159307171	159307331	.	+	2	Parent=FBgn0039770.1.mrna1;Target=FBgn0039770.1 521 681 +
Chr2	stalkie_big_nohaplotig	CDS	159307385	159307487	.	+	0	Parent=FBgn0039770.1.mrna1;Target=FBgn0039770.1 682 784 +
Chr2	stalkie_big_nohaplotig	CDS	159310037	159310173	.	+	2	Parent=FBgn0039770.1.mrna1;Target=FBgn0039770.1 785 921 +
Chr2	gffcl	locus	159310665	159313740	.	-	.	ID=RLOC_00023332;geneIDs=FBgn0039769.1.path1;transcripts=FBgn0039769.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159310665	159313740	.	-	.	ID=FBgn0039769.1.mrna1;geneID=FBgn0039769.1.path1;Name=FBgn0039769.1;Dir=sensecoverage=100.0;identity=99.7;matches=2025;mismatches=6;indels=0;unknowns=0;locus=RLOC_00023332
Chr2	stalkie_big_nohaplotig	exon	159310665	159310793	99	-	.	Parent=FBgn0039769.1.mrna1;Target=FBgn0039769.1 1903 2031 +
Chr2	stalkie_big_nohaplotig	exon	159310883	159311032	100	-	.	Parent=FBgn0039769.1.mrna1;Target=FBgn0039769.1 1753 1902 +
Chr2	stalkie_big_nohaplotig	exon	159311121	159311303	100	-	.	Parent=FBgn0039769.1.mrna1;Target=FBgn0039769.1 1570 1752 +
Chr2	stalkie_big_nohaplotig	exon	159311355	159311892	100	-	.	Parent=FBgn0039769.1.mrna1;Target=FBgn0039769.1 1032 1569 +
Chr2	stalkie_big_nohaplotig	exon	159312002	159312905	99	-	.	Parent=FBgn0039769.1.mrna1;Target=FBgn0039769.1 128 1031 +
Chr2	stalkie_big_nohaplotig	exon	159313614	159313740	100	-	.	Parent=FBgn0039769.1.mrna1;Target=FBgn0039769.1 1 127 +
Chr2	stalkie_big_nohaplotig	CDS	159310665	159310793	.	-	0	Parent=FBgn0039769.1.mrna1;Target=FBgn0039769.1 1903 2031 +
Chr2	stalkie_big_nohaplotig	CDS	159310883	159311032	.	-	0	Parent=FBgn0039769.1.mrna1;Target=FBgn0039769.1 1753 1902 +
Chr2	stalkie_big_nohaplotig	CDS	159311121	159311303	.	-	0	Parent=FBgn0039769.1.mrna1;Target=FBgn0039769.1 1570 1752 +
Chr2	stalkie_big_nohaplotig	CDS	159311355	159311892	.	-	1	Parent=FBgn0039769.1.mrna1;Target=FBgn0039769.1 1032 1569 +
Chr2	stalkie_big_nohaplotig	CDS	159312002	159312905	.	-	2	Parent=FBgn0039769.1.mrna1;Target=FBgn0039769.1 128 1031 +
Chr2	stalkie_big_nohaplotig	CDS	159313614	159313740	.	-	0	Parent=FBgn0039769.1.mrna1;Target=FBgn0039769.1 1 127 +
Chr2	gffcl	locus	159314258	159316548	.	-	.	ID=RLOC_00023333;geneIDs=FBgn0039768.1.path1;transcripts=FBgn0039768.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159314258	159316548	.	-	.	ID=FBgn0039768.1.mrna1;geneID=FBgn0039768.1.path1;Name=FBgn0039768.1;Dir=sensecoverage=100.0;identity=99.5;matches=1928;mismatches=9;indels=1;unknowns=0;locus=RLOC_00023333
Chr2	stalkie_big_nohaplotig	exon	159314258	159314376	98	-	.	Parent=FBgn0039768.1.mrna1;Target=FBgn0039768.1 1819 1938 +
Chr2	stalkie_big_nohaplotig	exon	159314437	159314619	98	-	.	Parent=FBgn0039768.1.mrna1;Target=FBgn0039768.1 1636 1818 +
Chr2	stalkie_big_nohaplotig	exon	159314674	159315211	99	-	.	Parent=FBgn0039768.1.mrna1;Target=FBgn0039768.1 1098 1635 +
Chr2	stalkie_big_nohaplotig	exon	159315266	159316175	99	-	.	Parent=FBgn0039768.1.mrna1;Target=FBgn0039768.1 188 1097 +
Chr2	stalkie_big_nohaplotig	exon	159316362	159316548	99	-	.	Parent=FBgn0039768.1.mrna1;Target=FBgn0039768.1 1 187 +
Chr2	stalkie_big_nohaplotig	CDS	159314258	159314376	.	-	0	Parent=FBgn0039768.1.mrna1;Target=FBgn0039768.1 1819 1938 +
Chr2	stalkie_big_nohaplotig	CDS	159314437	159314619	.	-	0	Parent=FBgn0039768.1.mrna1;Target=FBgn0039768.1 1636 1818 +
Chr2	stalkie_big_nohaplotig	CDS	159314674	159315211	.	-	1	Parent=FBgn0039768.1.mrna1;Target=FBgn0039768.1 1098 1635 +
Chr2	stalkie_big_nohaplotig	CDS	159315266	159316175	.	-	2	Parent=FBgn0039768.1.mrna1;Target=FBgn0039768.1 188 1097 +
Chr2	stalkie_big_nohaplotig	CDS	159316362	159316473	.	-	0	Parent=FBgn0039768.1.mrna1;Target=FBgn0039768.1 76 187 +
Chr2	gffcl	locus	159318364	159319966	.	+	.	ID=RLOC_00023334;geneIDs=FBgn0039767.1.path1;transcripts=FBgn0039767.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159318364	159319966	.	+	.	ID=FBgn0039767.1.mrna1;geneID=FBgn0039767.1.path1;Name=FBgn0039767.1;Dir=sensecoverage=100.0;identity=99.8;matches=1491;mismatches=3;indels=0;unknowns=0;locus=RLOC_00023334
Chr2	stalkie_big_nohaplotig	exon	159318364	159318499	100	+	.	Parent=FBgn0039767.1.mrna1;Target=FBgn0039767.1 1 136 +
Chr2	stalkie_big_nohaplotig	exon	159318555	159319165	99	+	.	Parent=FBgn0039767.1.mrna1;Target=FBgn0039767.1 137 747 +
Chr2	stalkie_big_nohaplotig	exon	159319220	159319966	99	+	.	Parent=FBgn0039767.1.mrna1;Target=FBgn0039767.1 748 1494 +
Chr2	stalkie_big_nohaplotig	CDS	159318364	159318499	.	+	0	Parent=FBgn0039767.1.mrna1;Target=FBgn0039767.1 1 136 +
Chr2	stalkie_big_nohaplotig	CDS	159318555	159319165	.	+	2	Parent=FBgn0039767.1.mrna1;Target=FBgn0039767.1 137 747 +
Chr2	stalkie_big_nohaplotig	CDS	159319220	159319966	.	+	0	Parent=FBgn0039767.1.mrna1;Target=FBgn0039767.1 748 1494 +
Chr2	gffcl	locus	159320717	159321207	.	-	.	ID=RLOC_00023335;geneIDs=FBgn0039765.1.path1;transcripts=FBgn0039765.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159320717	159321207	.	-	.	ID=FBgn0039765.1.mrna1;geneID=FBgn0039765.1.path1;Name=FBgn0039765.1;Dir=sensecoverage=100.0;identity=100.0;matches=435;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023335
Chr2	stalkie_big_nohaplotig	exon	159320717	159321075	100	-	.	Parent=FBgn0039765.1.mrna1;Target=FBgn0039765.1 77 435 +
Chr2	stalkie_big_nohaplotig	exon	159321132	159321207	100	-	.	Parent=FBgn0039765.1.mrna1;Target=FBgn0039765.1 1 76 +
Chr2	stalkie_big_nohaplotig	CDS	159320717	159321075	.	-	2	Parent=FBgn0039765.1.mrna1;Target=FBgn0039765.1 77 435 +
Chr2	stalkie_big_nohaplotig	CDS	159321132	159321207	.	-	0	Parent=FBgn0039765.1.mrna1;Target=FBgn0039765.1 1 76 +
Chr2	gffcl	locus	159328560	160956630	.	-	.	ID=RLOC_00023336;geneIDs=comp115379_c0_seq1.path1;transcripts=comp115379_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159328560	160956630	.	-	.	ID=comp115379_c0_seq1.mrna1;geneID=comp115379_c0_seq1.path1;Name=comp115379_c0_seq1;Dir=antisensecoverage=100.0;identity=83.6;matches=591;mismatches=68;indels=48;unknowns=0;Target=comp115379_c0_seq1 294 434 .;locus=RLOC_00023336
Chr2	stalkie_big_nohaplotig	exon	159328560	159328635	88	-	.	Parent=comp115379_c0_seq1.mrna1;Target=comp115379_c0_seq1 1 76 -
Chr2	stalkie_big_nohaplotig	exon	159332634	159332639	100	-	.	Parent=comp115379_c0_seq1.mrna1;Target=comp115379_c0_seq1 77 82 -
Chr2	stalkie_big_nohaplotig	exon	159339163	159339172	90	-	.	Parent=comp115379_c0_seq1.mrna1;Target=comp115379_c0_seq1 83 92 -
Chr2	stalkie_big_nohaplotig	exon	159342687	159342701	93	-	.	Parent=comp115379_c0_seq1.mrna1;Target=comp115379_c0_seq1 93 107 -
Chr2	stalkie_big_nohaplotig	exon	160954493	160955018	82	-	.	Parent=comp115379_c0_seq1.mrna1;Target=comp115379_c0_seq1 108 679 -
Chr2	stalkie_big_nohaplotig	exon	160956604	160956630	92	-	.	Parent=comp115379_c0_seq1.mrna1;Target=comp115379_c0_seq1 680 706 -
Chr2	stalkie_big_nohaplotig	CDS	160954679	160954789	.	-	0	Parent=comp115379_c0_seq1.mrna1
Chr2	gffcl	locus	159376491	159377345	.	-	.	ID=RLOC_00023337;geneIDs=FBgn0015221.1.path1;transcripts=FBgn0015221.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159376491	159377345	.	-	.	ID=FBgn0015221.1.mrna1;geneID=FBgn0015221.1.path1;Name=FBgn0015221.1;Dir=sensecoverage=98.8;identity=100.0;matches=794;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023337
Chr2	stalkie_big_nohaplotig	exon	159376491	159377104	100	-	.	Parent=FBgn0015221.1.mrna1;Target=FBgn0015221.1 191 804 +
Chr2	stalkie_big_nohaplotig	exon	159377166	159377345	100	-	.	Parent=FBgn0015221.1.mrna1;Target=FBgn0015221.1 11 190 +
Chr2	stalkie_big_nohaplotig	CDS	159376491	159377104	.	-	2	Parent=FBgn0015221.1.mrna1;Target=FBgn0015221.1 191 804 +
Chr2	stalkie_big_nohaplotig	CDS	159377166	159377343	.	-	0	Parent=FBgn0015221.1.mrna1;Target=FBgn0015221.1 13 190 +
Chr2	gffcl	locus	159379963	159381056	.	+	.	ID=RLOC_00023338;geneIDs=FBgn0015222.1.path1,comp47134_c0_seq1.path1;transcripts=FBgn0015222.1.mrna1,comp47134_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159379963	159381056	.	+	.	ID=FBgn0015222.1.mrna1;geneID=FBgn0015222.1.path1;Name=FBgn0015222.1;Dir=sensecoverage=100.0;identity=100.0;matches=684;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023338
Chr2	stalkie_big_nohaplotig	exon	159379963	159380041	100	+	.	Parent=FBgn0015222.1.mrna1;Target=FBgn0015222.1 1 79 +
Chr2	stalkie_big_nohaplotig	exon	159380332	159380609	100	+	.	Parent=FBgn0015222.1.mrna1;Target=FBgn0015222.1 80 357 +
Chr2	stalkie_big_nohaplotig	exon	159380670	159380693	100	+	.	Parent=FBgn0015222.1.mrna1;Target=FBgn0015222.1 358 381 +
Chr2	stalkie_big_nohaplotig	exon	159380754	159381056	100	+	.	Parent=FBgn0015222.1.mrna1;Target=FBgn0015222.1 382 684 +
Chr2	stalkie_big_nohaplotig	CDS	159379963	159380041	.	+	0	Parent=FBgn0015222.1.mrna1;Target=FBgn0015222.1 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	159380332	159380609	.	+	2	Parent=FBgn0015222.1.mrna1;Target=FBgn0015222.1 80 357 +
Chr2	stalkie_big_nohaplotig	CDS	159380670	159380693	.	+	0	Parent=FBgn0015222.1.mrna1;Target=FBgn0015222.1 358 381 +
Chr2	stalkie_big_nohaplotig	CDS	159380754	159381056	.	+	0	Parent=FBgn0015222.1.mrna1;Target=FBgn0015222.1 382 684 +
Chr2	stalkie_big_nohaplotig	mRNA	159379996	159380355	.	+	.	ID=comp47134_c0_seq1.mrna1;geneID=comp47134_c0_seq1.path1;Name=comp47134_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=359;mismatches=1;indels=0;unknowns=0;Target=comp47134_c0_seq1 360 1 .;CDS_Target=comp47134_c0_seq1 91 2 .;locus=RLOC_00023338
Chr2	stalkie_big_nohaplotig	exon	159379996	159380355	99	+	.	Parent=comp47134_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159379997	159380086	.	+	0	Parent=comp47134_c0_seq1.mrna1
Chr2	gffcl	locus	159392053	159392860	.	-	.	ID=RLOC_00023339;geneIDs=comp96317_c0_seq1.path1;transcripts=comp96317_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159392053	159392860	.	-	.	ID=comp96317_c0_seq1.mrna1;geneID=comp96317_c0_seq1.path1;Name=comp96317_c0_seq1;Dir=indeterminatecoverage=98.9;identity=99.8;matches=806;mismatches=2;indels=0;unknowns=0;Target=comp96317_c0_seq1 817 10 .;CDS_Target=comp96317_c0_seq1 103 11 .;locus=RLOC_00023339
Chr2	stalkie_big_nohaplotig	exon	159392053	159392860	99	-	.	Parent=comp96317_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159392767	159392859	.	-	0	Parent=comp96317_c0_seq1.mrna1
Chr2	gffcl	locus	159393338	159393861	.	+	.	ID=RLOC_00023340;geneIDs=comp150825_c0_seq1.path1;transcripts=comp150825_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159393338	159393861	.	+	.	ID=comp150825_c0_seq1.mrna1;geneID=comp150825_c0_seq1.path1;Name=comp150825_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=519;mismatches=5;indels=0;unknowns=0;Target=comp150825_c0_seq1 524 1 .;CDS_Target=comp150825_c0_seq1 75 1 .;locus=RLOC_00023340
Chr2	stalkie_big_nohaplotig	exon	159393338	159393861	99	+	.	Parent=comp150825_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159393338	159393412	.	+	0	Parent=comp150825_c0_seq1.mrna1
Chr2	gffcl	locus	159393987	159395956	.	-	.	ID=RLOC_00023341;geneIDs=comp147587_c0_seq1.path1;transcripts=comp147587_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159393987	159395956	.	-	.	ID=comp147587_c0_seq1.mrna1;geneID=comp147587_c0_seq1.path1;Name=comp147587_c0_seq1;Dir=indeterminatecoverage=98.9;identity=98.8;matches=1952;mismatches=9;indels=15;unknowns=0;Target=comp147587_c0_seq1 1988 22 .;CDS_Target=comp147587_c0_seq1 1915 1565 .;locus=RLOC_00023341
Chr2	stalkie_big_nohaplotig	exon	159393987	159395956	98	-	.	Parent=comp147587_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159394060	159394410	.	-	0	Parent=comp147587_c0_seq1.mrna1
Chr2	gffcl	locus	159397300	159397744	.	+	.	ID=RLOC_00023342;geneIDs=comp75312_c0_seq1.path1;transcripts=comp75312_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159397300	159397744	.	+	.	ID=comp75312_c0_seq1.mrna1;geneID=comp75312_c0_seq1.path1;Name=comp75312_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.3;matches=442;mismatches=3;indels=0;unknowns=0;Target=comp75312_c0_seq1 447 3 .;CDS_Target=comp75312_c0_seq1 155 57 .;locus=RLOC_00023342
Chr2	stalkie_big_nohaplotig	exon	159397300	159397744	99	+	.	Parent=comp75312_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159397354	159397452	.	+	0	Parent=comp75312_c0_seq1.mrna1
Chr2	gffcl	locus	159397865	159398458	.	-	.	ID=RLOC_00023343;geneIDs=comp160545_c2_seq1.path1;transcripts=comp160545_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159397865	159398458	.	-	.	ID=comp160545_c2_seq1.mrna1;geneID=comp160545_c2_seq1.path1;Name=comp160545_c2_seq1;Dir=indeterminatecoverage=99.8;identity=98.7;matches=586;mismatches=0;indels=8;unknowns=0;Target=comp160545_c2_seq1 587 2 .;CDS_Target=comp160545_c2_seq1 495 373 .;locus=RLOC_00023343
Chr2	stalkie_big_nohaplotig	exon	159397865	159398458	98	-	.	Parent=comp160545_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159397957	159398079	.	-	0	Parent=comp160545_c2_seq1.mrna1
Chr2	gffcl	locus	159399037	159408733	.	+	.	ID=RLOC_00023344;geneIDs=comp124910_c0_seq1.path1;transcripts=comp124910_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159399037	159408733	.	+	.	ID=comp124910_c0_seq1.mrna1;geneID=comp124910_c0_seq1.path1;Name=comp124910_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1322;mismatches=0;indels=0;unknowns=0;Target=comp124910_c0_seq1 1226 1119 .;locus=RLOC_00023344
Chr2	stalkie_big_nohaplotig	exon	159399037	159399753	100	+	.	Parent=comp124910_c0_seq1.mrna1;Target=comp124910_c0_seq1 717 1 .
Chr2	stalkie_big_nohaplotig	exon	159408129	159408733	100	+	.	Parent=comp124910_c0_seq1.mrna1;Target=comp124910_c0_seq1 1322 718 .
Chr2	stalkie_big_nohaplotig	CDS	159408530	159408637	.	+	0	Parent=comp124910_c0_seq1.mrna1
Chr2	gffcl	locus	159425459	159425971	.	-	.	ID=RLOC_00023346;geneIDs=comp118043_c0_seq1.path1;transcripts=comp118043_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159425459	159425971	.	-	.	ID=comp118043_c0_seq1.mrna1;geneID=comp118043_c0_seq1.path1;Name=comp118043_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=511;mismatches=2;indels=0;unknowns=0;Target=comp118043_c0_seq1 513 1 .;CDS_Target=comp118043_c0_seq1 386 252 .;locus=RLOC_00023346
Chr2	stalkie_big_nohaplotig	exon	159425459	159425971	99	-	.	Parent=comp118043_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159425586	159425720	.	-	0	Parent=comp118043_c0_seq1.mrna1
Chr2	gffcl	locus	159457255	159459609	.	-	.	ID=RLOC_00023347;geneIDs=comp115329_c0_seq1.path1;transcripts=comp115329_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159457255	159459609	.	-	.	ID=comp115329_c0_seq1.mrna1;geneID=comp115329_c0_seq1.path1;Name=comp115329_c0_seq1;Dir=sensecoverage=99.9;identity=99.6;matches=2047;mismatches=8;indels=0;unknowns=0;Target=comp115329_c0_seq1 1884 2057 +;locus=RLOC_00023347
Chr2	stalkie_big_nohaplotig	exon	159457255	159457535	100	-	.	Parent=comp115329_c0_seq1.mrna1;Target=comp115329_c0_seq1 1777 2057 +
Chr2	stalkie_big_nohaplotig	exon	159457836	159459609	99	-	.	Parent=comp115329_c0_seq1.mrna1;Target=comp115329_c0_seq1 3 1776 +
Chr2	stalkie_big_nohaplotig	CDS	159457255	159457428	.	-	0	Parent=comp115329_c0_seq1.mrna1
Chr2	gffcl	locus	159465074	159466486	.	+	.	ID=RLOC_00023348;geneIDs=FBgn0039759.2.path1;transcripts=FBgn0039759.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159465074	159466486	.	+	.	ID=FBgn0039759.2.mrna1;geneID=FBgn0039759.2.path1;Name=FBgn0039759.2;Dir=sensecoverage=100.0;identity=99.8;matches=1153;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023348
Chr2	stalkie_big_nohaplotig	exon	159465074	159465521	99	+	.	Parent=FBgn0039759.2.mrna1;Target=FBgn0039759.2 1 448 +
Chr2	stalkie_big_nohaplotig	exon	159465658	159465766	100	+	.	Parent=FBgn0039759.2.mrna1;Target=FBgn0039759.2 449 557 +
Chr2	stalkie_big_nohaplotig	exon	159465829	159466127	99	+	.	Parent=FBgn0039759.2.mrna1;Target=FBgn0039759.2 558 856 +
Chr2	stalkie_big_nohaplotig	exon	159466188	159466486	100	+	.	Parent=FBgn0039759.2.mrna1;Target=FBgn0039759.2 857 1155 +
Chr2	stalkie_big_nohaplotig	CDS	159465074	159465521	.	+	0	Parent=FBgn0039759.2.mrna1;Target=FBgn0039759.2 1 448 +
Chr2	stalkie_big_nohaplotig	CDS	159465658	159465766	.	+	2	Parent=FBgn0039759.2.mrna1;Target=FBgn0039759.2 449 557 +
Chr2	stalkie_big_nohaplotig	CDS	159465829	159466127	.	+	1	Parent=FBgn0039759.2.mrna1;Target=FBgn0039759.2 558 856 +
Chr2	stalkie_big_nohaplotig	CDS	159466188	159466486	.	+	2	Parent=FBgn0039759.2.mrna1;Target=FBgn0039759.2 857 1155 +
Chr2	gffcl	locus	159467870	159469385	.	+	.	ID=RLOC_00023349;geneIDs=FBgn0039759.1.path1;transcripts=FBgn0039759.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159467870	159469385	.	+	.	ID=FBgn0039759.1.mrna1;geneID=FBgn0039759.1.path1;Name=FBgn0039759.1;Dir=sensecoverage=100.0;identity=99.9;matches=1250;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023349
Chr2	stalkie_big_nohaplotig	exon	159467870	159467960	100	+	.	Parent=FBgn0039759.1.mrna1;Target=FBgn0039759.1 1 91 +
Chr2	stalkie_big_nohaplotig	exon	159468101	159468568	99	+	.	Parent=FBgn0039759.1.mrna1;Target=FBgn0039759.1 92 559 +
Chr2	stalkie_big_nohaplotig	exon	159468631	159468739	100	+	.	Parent=FBgn0039759.1.mrna1;Target=FBgn0039759.1 560 668 +
Chr2	stalkie_big_nohaplotig	exon	159468803	159469385	100	+	.	Parent=FBgn0039759.1.mrna1;Target=FBgn0039759.1 669 1251 +
Chr2	stalkie_big_nohaplotig	CDS	159467870	159467960	.	+	0	Parent=FBgn0039759.1.mrna1;Target=FBgn0039759.1 1 91 +
Chr2	stalkie_big_nohaplotig	CDS	159468101	159468568	.	+	2	Parent=FBgn0039759.1.mrna1;Target=FBgn0039759.1 92 559 +
Chr2	stalkie_big_nohaplotig	CDS	159468631	159468739	.	+	2	Parent=FBgn0039759.1.mrna1;Target=FBgn0039759.1 560 668 +
Chr2	stalkie_big_nohaplotig	CDS	159468803	159469385	.	+	1	Parent=FBgn0039759.1.mrna1;Target=FBgn0039759.1 669 1251 +
Chr2	gffcl	locus	159471059	159472745	.	+	.	ID=RLOC_00023350;geneIDs=FBgn0039758.1.path1;transcripts=FBgn0039758.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159471059	159472745	.	+	.	ID=FBgn0039758.1.mrna1;geneID=FBgn0039758.1.path1;Name=FBgn0039758.1;Dir=sensecoverage=100.0;identity=99.6;matches=1461;mismatches=6;indels=0;unknowns=0;locus=RLOC_00023350
Chr2	stalkie_big_nohaplotig	exon	159471059	159471803	99	+	.	Parent=FBgn0039758.1.mrna1;Target=FBgn0039758.1 1 745 +
Chr2	stalkie_big_nohaplotig	exon	159471896	159471992	100	+	.	Parent=FBgn0039758.1.mrna1;Target=FBgn0039758.1 746 842 +
Chr2	stalkie_big_nohaplotig	exon	159472058	159472356	100	+	.	Parent=FBgn0039758.1.mrna1;Target=FBgn0039758.1 843 1141 +
Chr2	stalkie_big_nohaplotig	exon	159472420	159472745	99	+	.	Parent=FBgn0039758.1.mrna1;Target=FBgn0039758.1 1142 1467 +
Chr2	stalkie_big_nohaplotig	CDS	159471059	159471803	.	+	0	Parent=FBgn0039758.1.mrna1;Target=FBgn0039758.1 1 745 +
Chr2	stalkie_big_nohaplotig	CDS	159471896	159471992	.	+	2	Parent=FBgn0039758.1.mrna1;Target=FBgn0039758.1 746 842 +
Chr2	stalkie_big_nohaplotig	CDS	159472058	159472356	.	+	1	Parent=FBgn0039758.1.mrna1;Target=FBgn0039758.1 843 1141 +
Chr2	stalkie_big_nohaplotig	CDS	159472420	159472745	.	+	2	Parent=FBgn0039758.1.mrna1;Target=FBgn0039758.1 1142 1467 +
Chr2	gffcl	locus	159484686	159522131	.	+	.	ID=RLOC_00023351;geneIDs=comp163020_c0_seq1.path2;transcripts=comp163020_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	159484686	159522131	.	+	.	ID=comp163020_c0_seq1.mrna2;geneID=comp163020_c0_seq1.path2;Name=comp163020_c0_seq1;Dir=indeterminatecoverage=77.2;identity=100.0;matches=624;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023351
Chr2	stalkie_big_nohaplotig	exon	159484686	159484689	100	+	.	Parent=comp163020_c0_seq1.mrna2;Target=comp163020_c0_seq1 190 187 .
Chr2	stalkie_big_nohaplotig	exon	159489684	159489688	100	+	.	Parent=comp163020_c0_seq1.mrna2;Target=comp163020_c0_seq1 200 196 .
Chr2	stalkie_big_nohaplotig	exon	159521517	159522131	100	+	.	Parent=comp163020_c0_seq1.mrna2;Target=comp163020_c0_seq1 815 201 .
Chr2	stalkie_big_nohaplotig	CDS	159484686	159484689	.	+	1	Parent=comp163020_c0_seq1.mrna2;Target=comp163020_c0_seq1 190 187 .
Chr2	stalkie_big_nohaplotig	CDS	159489684	159489688	.	+	0	Parent=comp163020_c0_seq1.mrna2;Target=comp163020_c0_seq1 200 196 .
Chr2	stalkie_big_nohaplotig	CDS	159521517	159521588	.	+	1	Parent=comp163020_c0_seq1.mrna2;Target=comp163020_c0_seq1 272 201 .
Chr2	gffcl	locus	159493845	159494418	.	-	.	ID=RLOC_00023352;geneIDs=comp108179_c0_seq1.path1;transcripts=comp108179_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159493845	159494418	.	-	.	ID=comp108179_c0_seq1.mrna1;geneID=comp108179_c0_seq1.path1;Name=comp108179_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=574;mismatches=0;indels=0;unknowns=0;Target=comp108179_c0_seq1 574 1 .;CDS_Target=comp108179_c0_seq1 478 134 .;locus=RLOC_00023352
Chr2	stalkie_big_nohaplotig	exon	159493845	159494418	100	-	.	Parent=comp108179_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159493941	159494285	.	-	0	Parent=comp108179_c0_seq1.mrna1
Chr2	gffcl	locus	159495297	159497480	.	+	.	ID=RLOC_00023353;geneIDs=FBgn0039757.1.path1,comp147508_c0_seq1.path1;transcripts=FBgn0039757.1.mrna1,comp147508_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159495297	159497480	.	+	.	ID=FBgn0039757.1.mrna1;geneID=FBgn0039757.1.path1;Name=FBgn0039757.1;Dir=sensecoverage=100.0;identity=100.0;matches=633;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023353
Chr2	stalkie_big_nohaplotig	exon	159495297	159495350	100	+	.	Parent=FBgn0039757.1.mrna1;Target=FBgn0039757.1 1 54 +
Chr2	stalkie_big_nohaplotig	exon	159495601	159495765	100	+	.	Parent=FBgn0039757.1.mrna1;Target=FBgn0039757.1 55 219 +
Chr2	stalkie_big_nohaplotig	exon	159495820	159496152	100	+	.	Parent=FBgn0039757.1.mrna1;Target=FBgn0039757.1 220 552 +
Chr2	stalkie_big_nohaplotig	exon	159497400	159497480	100	+	.	Parent=FBgn0039757.1.mrna1;Target=FBgn0039757.1 553 633 +
Chr2	stalkie_big_nohaplotig	CDS	159495297	159495350	.	+	0	Parent=FBgn0039757.1.mrna1;Target=FBgn0039757.1 1 54 +
Chr2	stalkie_big_nohaplotig	CDS	159495601	159495765	.	+	0	Parent=FBgn0039757.1.mrna1;Target=FBgn0039757.1 55 219 +
Chr2	stalkie_big_nohaplotig	CDS	159495820	159496152	.	+	0	Parent=FBgn0039757.1.mrna1;Target=FBgn0039757.1 220 552 +
Chr2	stalkie_big_nohaplotig	CDS	159497400	159497480	.	+	0	Parent=FBgn0039757.1.mrna1;Target=FBgn0039757.1 553 633 +
Chr2	stalkie_big_nohaplotig	mRNA	159496362	159497421	.	+	.	ID=comp147508_c0_seq1.mrna1;geneID=comp147508_c0_seq1.path1;Name=comp147508_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1060;mismatches=0;indels=0;unknowns=0;Target=comp147508_c0_seq1 1060 1 .;CDS_Target=comp147508_c0_seq1 212 21 .;locus=RLOC_00023353
Chr2	stalkie_big_nohaplotig	exon	159496362	159497421	100	+	.	Parent=comp147508_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159496382	159496573	.	+	0	Parent=comp147508_c0_seq1.mrna1
Chr2	gffcl	locus	159498602	159498667	.	-	.	ID=RLOC_00023354;geneIDs=comp148870_c0_seq1.path2;transcripts=comp148870_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	159498602	159498667	.	-	.	ID=comp148870_c0_seq1.mrna2;geneID=comp148870_c0_seq1.path2;Name=comp148870_c0_seq1;Dir=indeterminatecoverage=7.2;identity=100.0;matches=66;mismatches=0;indels=0;unknowns=0;Target=comp148870_c0_seq1 919 854 .;locus=RLOC_00023354
Chr2	stalkie_big_nohaplotig	exon	159498602	159498667	100	-	.	Parent=comp148870_c0_seq1.mrna2
Chr2	gffcl	locus	159500712	160209803	.	+	.	ID=RLOC_00023355;geneIDs=FBgn0039756.1.path1,FBgn0039756.2.path1;transcripts=FBgn0039756.1.mrna1,FBgn0039756.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159500712	160209803	.	+	.	ID=FBgn0039756.1.mrna1;geneID=FBgn0039756.1.path1;Name=FBgn0039756.1;Dir=sensecoverage=80.4;identity=99.2;matches=1101;mismatches=9;indels=0;unknowns=0;locus=RLOC_00023355
Chr2	stalkie_big_nohaplotig	exon	159500712	159500757	100	+	.	Parent=FBgn0039756.1.mrna1;Target=FBgn0039756.1 1 46 +
Chr2	stalkie_big_nohaplotig	exon	159501639	159502046	100	+	.	Parent=FBgn0039756.1.mrna1;Target=FBgn0039756.1 47 454 +
Chr2	stalkie_big_nohaplotig	exon	159505001	159505131	100	+	.	Parent=FBgn0039756.1.mrna1;Target=FBgn0039756.1 455 585 +
Chr2	stalkie_big_nohaplotig	exon	159505182	159505573	100	+	.	Parent=FBgn0039756.1.mrna1;Target=FBgn0039756.1 586 977 +
Chr2	stalkie_big_nohaplotig	exon	159505645	159505746	92	+	.	Parent=FBgn0039756.1.mrna1;Target=FBgn0039756.1 978 1079 +
Chr2	stalkie_big_nohaplotig	exon	160192813	160192827	93	+	.	Parent=FBgn0039756.1.mrna1;Target=FBgn0039756.1 1080 1094 +
Chr2	stalkie_big_nohaplotig	exon	160195022	160195027	100	+	.	Parent=FBgn0039756.1.mrna1;Target=FBgn0039756.1 1095 1100 +
Chr2	stalkie_big_nohaplotig	exon	160206749	160206751	100	+	.	Parent=FBgn0039756.1.mrna1;Target=FBgn0039756.1 1101 1103 +
Chr2	stalkie_big_nohaplotig	exon	160209798	160209803	100	+	.	Parent=FBgn0039756.1.mrna1;Target=FBgn0039756.1 1104 1109 +
Chr2	stalkie_big_nohaplotig	CDS	159500712	159500757	.	+	0	Parent=FBgn0039756.1.mrna1;Target=FBgn0039756.1 1 46 +
Chr2	stalkie_big_nohaplotig	CDS	159501639	159502046	.	+	2	Parent=FBgn0039756.1.mrna1;Target=FBgn0039756.1 47 454 +
Chr2	stalkie_big_nohaplotig	CDS	159505001	159505131	.	+	2	Parent=FBgn0039756.1.mrna1;Target=FBgn0039756.1 455 585 +
Chr2	stalkie_big_nohaplotig	CDS	159505182	159505573	.	+	0	Parent=FBgn0039756.1.mrna1;Target=FBgn0039756.1 586 977 +
Chr2	stalkie_big_nohaplotig	CDS	159505645	159505746	.	+	1	Parent=FBgn0039756.1.mrna1;Target=FBgn0039756.1 978 1079 +
Chr2	stalkie_big_nohaplotig	CDS	160192813	160192827	.	+	1	Parent=FBgn0039756.1.mrna1;Target=FBgn0039756.1 1080 1094 +
Chr2	stalkie_big_nohaplotig	CDS	160195022	160195027	.	+	1	Parent=FBgn0039756.1.mrna1;Target=FBgn0039756.1 1095 1100 +
Chr2	stalkie_big_nohaplotig	CDS	160206749	160206751	.	+	1	Parent=FBgn0039756.1.mrna1;Target=FBgn0039756.1 1101 1103 +
Chr2	stalkie_big_nohaplotig	CDS	160209798	160209803	.	+	1	Parent=FBgn0039756.1.mrna1;Target=FBgn0039756.1 1104 1109 +
Chr2	stalkie_big_nohaplotig	mRNA	159505180	159506034	.	+	.	ID=FBgn0039756.2.mrna1;geneID=FBgn0039756.2.path1;Name=FBgn0039756.2;Dir=sensecoverage=95.3;identity=99.9;matches=731;mismatches=0;indels=1;unknowns=0;Target=FBgn0039756.2 39 209 +;locus=RLOC_00023355
Chr2	stalkie_big_nohaplotig	exon	159505180	159505573	99	+	.	Parent=FBgn0039756.2.mrna1;Target=FBgn0039756.2 37 431 +
Chr2	stalkie_big_nohaplotig	exon	159505645	159505820	100	+	.	Parent=FBgn0039756.2.mrna1;Target=FBgn0039756.2 432 607 +
Chr2	stalkie_big_nohaplotig	exon	159505874	159506034	100	+	.	Parent=FBgn0039756.2.mrna1;Target=FBgn0039756.2 608 768 +
Chr2	stalkie_big_nohaplotig	CDS	159505182	159505351	.	+	0	Parent=FBgn0039756.2.mrna1
Chr2	gffcl	locus	159502817	159503267	.	-	.	ID=RLOC_00023356;geneIDs=comp1344991_c0_seq1.path1;transcripts=comp1344991_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159502817	159503267	.	-	.	ID=comp1344991_c0_seq1.mrna1;geneID=comp1344991_c0_seq1.path1;Name=comp1344991_c0_seq1;Dir=indeterminatecoverage=94.9;identity=100.0;matches=451;mismatches=0;indels=0;unknowns=0;Target=comp1344991_c0_seq1 475 25 .;CDS_Target=comp1344991_c0_seq1 286 134 .;locus=RLOC_00023356
Chr2	stalkie_big_nohaplotig	exon	159502817	159503267	100	-	.	Parent=comp1344991_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159503006	159503158	.	-	0	Parent=comp1344991_c0_seq1.mrna1
Chr2	gffcl	locus	159503377	159504179	.	+	.	ID=RLOC_00023357;geneIDs=comp69768_c0_seq1.path1;transcripts=comp69768_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159503377	159504179	.	+	.	ID=comp69768_c0_seq1.mrna1;geneID=comp69768_c0_seq1.path1;Name=comp69768_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=802;mismatches=1;indels=0;unknowns=0;Target=comp69768_c0_seq1 803 1 .;CDS_Target=comp69768_c0_seq1 149 3 .;locus=RLOC_00023357
Chr2	stalkie_big_nohaplotig	exon	159503377	159504179	99	+	.	Parent=comp69768_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159503379	159503525	.	+	0	Parent=comp69768_c0_seq1.mrna1
Chr2	gffcl	locus	159504420	159504698	.	-	.	ID=RLOC_00023358;geneIDs=comp149846_c0_seq1.path1;transcripts=comp149846_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159504420	159504698	.	-	.	ID=comp149846_c0_seq1.mrna1;geneID=comp149846_c0_seq1.path1;Name=comp149846_c0_seq1;Dir=indeterminatecoverage=99.6;identity=97.8;matches=273;mismatches=6;indels=0;unknowns=0;Target=comp149846_c0_seq1 280 2 .;CDS_Target=comp149846_c0_seq1 280 20 .;locus=RLOC_00023358
Chr2	stalkie_big_nohaplotig	exon	159504420	159504698	97	-	.	Parent=comp149846_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159504420	159504680	.	-	0	Parent=comp149846_c0_seq1.mrna1
Chr2	gffcl	locus	159506667	159508521	.	.	.	ID=RLOC_00023359;geneIDs=FBgn0039755.1.path1,comp116249_c0_seq1.path1;transcripts=FBgn0039755.1.mrna1,comp116249_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159506667	159508521	.	+	.	ID=FBgn0039755.1.mrna1;geneID=FBgn0039755.1.path1;Name=FBgn0039755.1;Dir=sensecoverage=100.0;identity=100.0;matches=1056;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023359
Chr2	stalkie_big_nohaplotig	exon	159506667	159506690	100	+	.	Parent=FBgn0039755.1.mrna1;Target=FBgn0039755.1 1 24 +
Chr2	stalkie_big_nohaplotig	exon	159507162	159507357	100	+	.	Parent=FBgn0039755.1.mrna1;Target=FBgn0039755.1 25 220 +
Chr2	stalkie_big_nohaplotig	exon	159507421	159507551	100	+	.	Parent=FBgn0039755.1.mrna1;Target=FBgn0039755.1 221 351 +
Chr2	stalkie_big_nohaplotig	exon	159507758	159507963	100	+	.	Parent=FBgn0039755.1.mrna1;Target=FBgn0039755.1 352 557 +
Chr2	stalkie_big_nohaplotig	exon	159508023	159508521	100	+	.	Parent=FBgn0039755.1.mrna1;Target=FBgn0039755.1 558 1056 +
Chr2	stalkie_big_nohaplotig	CDS	159506667	159506690	.	+	0	Parent=FBgn0039755.1.mrna1;Target=FBgn0039755.1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	159507162	159507357	.	+	0	Parent=FBgn0039755.1.mrna1;Target=FBgn0039755.1 25 220 +
Chr2	stalkie_big_nohaplotig	CDS	159507421	159507551	.	+	2	Parent=FBgn0039755.1.mrna1;Target=FBgn0039755.1 221 351 +
Chr2	stalkie_big_nohaplotig	CDS	159507758	159507963	.	+	0	Parent=FBgn0039755.1.mrna1;Target=FBgn0039755.1 352 557 +
Chr2	stalkie_big_nohaplotig	CDS	159508023	159508521	.	+	1	Parent=FBgn0039755.1.mrna1;Target=FBgn0039755.1 558 1056 +
Chr2	stalkie_big_nohaplotig	mRNA	159507529	159507780	.	-	.	ID=comp116249_c0_seq1.mrna1;geneID=comp116249_c0_seq1.path1;Name=comp116249_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=252;mismatches=0;indels=0;unknowns=0;Target=comp116249_c0_seq1 252 1 .;CDS_Target=comp116249_c0_seq1 252 199 .;locus=RLOC_00023359
Chr2	stalkie_big_nohaplotig	exon	159507529	159507780	100	-	.	Parent=comp116249_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159507529	159507582	.	-	0	Parent=comp116249_c0_seq1.mrna1
Chr2	gffcl	locus	159510999	159514728	.	-	.	ID=RLOC_00023360;geneIDs=FBgn0039754.1.path1;transcripts=FBgn0039754.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159510999	159514728	.	-	.	ID=FBgn0039754.1.mrna1;geneID=FBgn0039754.1.path1;Name=FBgn0039754.1;Dir=sensecoverage=100.0;identity=100.0;matches=1356;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023360
Chr2	stalkie_big_nohaplotig	exon	159510999	159511392	100	-	.	Parent=FBgn0039754.1.mrna1;Target=FBgn0039754.1 963 1356 +
Chr2	stalkie_big_nohaplotig	exon	159511443	159511834	100	-	.	Parent=FBgn0039754.1.mrna1;Target=FBgn0039754.1 571 962 +
Chr2	stalkie_big_nohaplotig	exon	159512270	159512400	100	-	.	Parent=FBgn0039754.1.mrna1;Target=FBgn0039754.1 440 570 +
Chr2	stalkie_big_nohaplotig	exon	159514290	159514728	100	-	.	Parent=FBgn0039754.1.mrna1;Target=FBgn0039754.1 1 439 +
Chr2	stalkie_big_nohaplotig	CDS	159510999	159511392	.	-	1	Parent=FBgn0039754.1.mrna1;Target=FBgn0039754.1 963 1356 +
Chr2	stalkie_big_nohaplotig	CDS	159511443	159511834	.	-	0	Parent=FBgn0039754.1.mrna1;Target=FBgn0039754.1 571 962 +
Chr2	stalkie_big_nohaplotig	CDS	159512270	159512400	.	-	2	Parent=FBgn0039754.1.mrna1;Target=FBgn0039754.1 440 570 +
Chr2	stalkie_big_nohaplotig	CDS	159514290	159514728	.	-	0	Parent=FBgn0039754.1.mrna1;Target=FBgn0039754.1 1 439 +
Chr2	gffcl	locus	159532305	159532776	.	+	.	ID=RLOC_00023361;geneIDs=comp141060_c0_seq1.path2;transcripts=comp141060_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	159532305	159532776	.	+	.	ID=comp141060_c0_seq1.mrna2;geneID=comp141060_c0_seq1.path2;Name=comp141060_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=469;mismatches=3;indels=0;unknowns=0;Target=comp141060_c0_seq1 472 1 .;CDS_Target=comp141060_c0_seq1 107 3 .;locus=RLOC_00023361
Chr2	stalkie_big_nohaplotig	exon	159532305	159532776	99	+	.	Parent=comp141060_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	159532307	159532411	.	+	0	Parent=comp141060_c0_seq1.mrna2
Chr2	gffcl	locus	159535415	159540323	.	+	.	ID=RLOC_00023362;geneIDs=FBgn0005674.1.path1;transcripts=FBgn0005674.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159535415	159540323	.	+	.	ID=FBgn0005674.1.mrna1;geneID=FBgn0005674.1.path1;Name=FBgn0005674.1;Dir=sensecoverage=99.4;identity=99.7;matches=3291;mismatches=9;indels=0;unknowns=9;locus=RLOC_00023362
Chr2	stalkie_big_nohaplotig	exon	159535415	159536356	100	+	.	Parent=FBgn0005674.1.mrna1;Target=FBgn0005674.1 20 961 +
Chr2	stalkie_big_nohaplotig	exon	159536420	159536591	100	+	.	Parent=FBgn0005674.1.mrna1;Target=FBgn0005674.1 962 1133 +
Chr2	stalkie_big_nohaplotig	exon	159536647	159536880	100	+	.	Parent=FBgn0005674.1.mrna1;Target=FBgn0005674.1 1134 1367 +
Chr2	stalkie_big_nohaplotig	exon	159536949	159537552	100	+	.	Parent=FBgn0005674.1.mrna1;Target=FBgn0005674.1 1368 1971 +
Chr2	stalkie_big_nohaplotig	exon	159537625	159537858	100	+	.	Parent=FBgn0005674.1.mrna1;Target=FBgn0005674.1 1972 2205 +
Chr2	stalkie_big_nohaplotig	exon	159539201	159540323	99	+	.	Parent=FBgn0005674.1.mrna1;Target=FBgn0005674.1 2206 3328 +
Chr2	stalkie_big_nohaplotig	CDS	159535417	159536356	.	+	0	Parent=FBgn0005674.1.mrna1;Target=FBgn0005674.1 22 961 +
Chr2	stalkie_big_nohaplotig	CDS	159536420	159536591	.	+	2	Parent=FBgn0005674.1.mrna1;Target=FBgn0005674.1 962 1133 +
Chr2	stalkie_big_nohaplotig	CDS	159536647	159536880	.	+	1	Parent=FBgn0005674.1.mrna1;Target=FBgn0005674.1 1134 1367 +
Chr2	stalkie_big_nohaplotig	CDS	159536949	159537552	.	+	1	Parent=FBgn0005674.1.mrna1;Target=FBgn0005674.1 1368 1971 +
Chr2	stalkie_big_nohaplotig	CDS	159537625	159537858	.	+	0	Parent=FBgn0005674.1.mrna1;Target=FBgn0005674.1 1972 2205 +
Chr2	stalkie_big_nohaplotig	CDS	159539201	159540322	.	+	0	Parent=FBgn0005674.1.mrna1;Target=FBgn0005674.1 2206 3327 +
Chr2	gffcl	locus	159562088	159563929	.	-	.	ID=RLOC_00023364;geneIDs=FBgn0039743.2.path1;transcripts=FBgn0039743.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159562088	159563929	.	-	.	ID=FBgn0039743.2.mrna1;geneID=FBgn0039743.2.path1;Name=FBgn0039743.2;Dir=sensecoverage=100.0;identity=100.0;matches=1551;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023364
Chr2	stalkie_big_nohaplotig	exon	159562088	159563019	100	-	.	Parent=FBgn0039743.2.mrna1;Target=FBgn0039743.2 620 1551 +
Chr2	stalkie_big_nohaplotig	exon	159563311	159563929	100	-	.	Parent=FBgn0039743.2.mrna1;Target=FBgn0039743.2 1 619 +
Chr2	stalkie_big_nohaplotig	CDS	159562088	159563019	.	-	2	Parent=FBgn0039743.2.mrna1;Target=FBgn0039743.2 620 1551 +
Chr2	stalkie_big_nohaplotig	CDS	159563311	159563929	.	-	0	Parent=FBgn0039743.2.mrna1;Target=FBgn0039743.2 1 619 +
Chr2	gffcl	locus	159579008	159588122	.	+	.	ID=RLOC_00023365;geneIDs=FBgn0000533.1.path1;transcripts=FBgn0000533.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159579008	159588122	.	+	.	ID=FBgn0000533.1.mrna1;geneID=FBgn0000533.1.path1;Name=FBgn0000533.1;Dir=sensecoverage=100.0;identity=99.9;matches=1253;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023365
Chr2	stalkie_big_nohaplotig	exon	159579008	159579140	100	+	.	Parent=FBgn0000533.1.mrna1;Target=FBgn0000533.1 1 133 +
Chr2	stalkie_big_nohaplotig	exon	159586889	159587085	100	+	.	Parent=FBgn0000533.1.mrna1;Target=FBgn0000533.1 134 330 +
Chr2	stalkie_big_nohaplotig	exon	159587143	159587335	100	+	.	Parent=FBgn0000533.1.mrna1;Target=FBgn0000533.1 331 523 +
Chr2	stalkie_big_nohaplotig	exon	159587392	159588122	99	+	.	Parent=FBgn0000533.1.mrna1;Target=FBgn0000533.1 524 1254 +
Chr2	stalkie_big_nohaplotig	CDS	159579008	159579140	.	+	0	Parent=FBgn0000533.1.mrna1;Target=FBgn0000533.1 1 133 +
Chr2	stalkie_big_nohaplotig	CDS	159586889	159587085	.	+	2	Parent=FBgn0000533.1.mrna1;Target=FBgn0000533.1 134 330 +
Chr2	stalkie_big_nohaplotig	CDS	159587143	159587335	.	+	0	Parent=FBgn0000533.1.mrna1;Target=FBgn0000533.1 331 523 +
Chr2	stalkie_big_nohaplotig	CDS	159587392	159588122	.	+	2	Parent=FBgn0000533.1.mrna1;Target=FBgn0000533.1 524 1254 +
Chr2	gffcl	locus	159585650	159585736	.	+	.	ID=RLOC_00023366;geneIDs=comp152977_c0_seq1.path1;transcripts=comp152977_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159585650	159585736	.	+	.	ID=comp152977_c0_seq1.mrna1;geneID=comp152977_c0_seq1.path1;Name=comp152977_c0_seq1;Dir=indeterminatecoverage=15.4;identity=94.3;matches=82;mismatches=5;indels=0;unknowns=0;Target=comp152977_c0_seq1 87 1 .;locus=RLOC_00023366
Chr2	stalkie_big_nohaplotig	exon	159585650	159585736	94	+	.	Parent=comp152977_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159592484	159594809	.	-	.	ID=comp163927_c0_seq1.mrna2;geneID=comp163927_c0_seq1.path2;Name=comp163927_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=2320;mismatches=6;indels=0;unknowns=0;Target=comp163927_c0_seq1 2326 1 .;CDS_Target=comp163927_c0_seq1 244 2 .;locus=RLOC_00023367
Chr2	stalkie_big_nohaplotig	exon	159592484	159594809	99	-	.	Parent=comp163927_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	159594566	159594808	.	-	0	Parent=comp163927_c0_seq1.mrna2
Chr2	gffcl	locus	159596217	159596833	.	-	.	ID=RLOC_00023368;geneIDs=comp64297_c0_seq1.path1;transcripts=comp64297_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159596217	159596833	.	-	.	ID=comp64297_c0_seq1.mrna1;geneID=comp64297_c0_seq1.path1;Name=comp64297_c0_seq1;Dir=indeterminatecoverage=99.5;identity=99.7;matches=615;mismatches=1;indels=1;unknowns=0;Target=comp64297_c0_seq1 619 4 .;CDS_Target=comp64297_c0_seq1 223 146 .;locus=RLOC_00023368
Chr2	stalkie_big_nohaplotig	exon	159596217	159596833	99	-	.	Parent=comp64297_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159596614	159596691	.	-	0	Parent=comp64297_c0_seq1.mrna1
Chr2	gffcl	locus	159597105	159602562	.	-	.	ID=RLOC_00023369;geneIDs=FBgn0005777.1.path1;transcripts=FBgn0005777.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159597105	159602562	.	-	.	ID=FBgn0005777.1.mrna1;geneID=FBgn0005777.1.path1;Name=FBgn0005777.1;Dir=sensecoverage=100.0;identity=99.9;matches=1571;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023369
Chr2	stalkie_big_nohaplotig	exon	159597105	159597161	100	-	.	Parent=FBgn0005777.1.mrna1;Target=FBgn0005777.1 1516 1572 +
Chr2	stalkie_big_nohaplotig	exon	159598576	159598657	100	-	.	Parent=FBgn0005777.1.mrna1;Target=FBgn0005777.1 1434 1515 +
Chr2	stalkie_big_nohaplotig	exon	159598727	159599177	100	-	.	Parent=FBgn0005777.1.mrna1;Target=FBgn0005777.1 983 1433 +
Chr2	stalkie_big_nohaplotig	exon	159599274	159599544	100	-	.	Parent=FBgn0005777.1.mrna1;Target=FBgn0005777.1 712 982 +
Chr2	stalkie_big_nohaplotig	exon	159599909	159600030	100	-	.	Parent=FBgn0005777.1.mrna1;Target=FBgn0005777.1 590 711 +
Chr2	stalkie_big_nohaplotig	exon	159600094	159600244	100	-	.	Parent=FBgn0005777.1.mrna1;Target=FBgn0005777.1 439 589 +
Chr2	stalkie_big_nohaplotig	exon	159600313	159600554	100	-	.	Parent=FBgn0005777.1.mrna1;Target=FBgn0005777.1 197 438 +
Chr2	stalkie_big_nohaplotig	exon	159602367	159602562	99	-	.	Parent=FBgn0005777.1.mrna1;Target=FBgn0005777.1 1 196 +
Chr2	stalkie_big_nohaplotig	CDS	159597105	159597161	.	-	0	Parent=FBgn0005777.1.mrna1;Target=FBgn0005777.1 1516 1572 +
Chr2	stalkie_big_nohaplotig	CDS	159598576	159598657	.	-	1	Parent=FBgn0005777.1.mrna1;Target=FBgn0005777.1 1434 1515 +
Chr2	stalkie_big_nohaplotig	CDS	159598727	159599177	.	-	2	Parent=FBgn0005777.1.mrna1;Target=FBgn0005777.1 983 1433 +
Chr2	stalkie_big_nohaplotig	CDS	159599274	159599544	.	-	0	Parent=FBgn0005777.1.mrna1;Target=FBgn0005777.1 712 982 +
Chr2	stalkie_big_nohaplotig	CDS	159599909	159600030	.	-	2	Parent=FBgn0005777.1.mrna1;Target=FBgn0005777.1 590 711 +
Chr2	stalkie_big_nohaplotig	CDS	159600094	159600244	.	-	0	Parent=FBgn0005777.1.mrna1;Target=FBgn0005777.1 439 589 +
Chr2	stalkie_big_nohaplotig	CDS	159600313	159600554	.	-	2	Parent=FBgn0005777.1.mrna1;Target=FBgn0005777.1 197 438 +
Chr2	stalkie_big_nohaplotig	CDS	159602367	159602562	.	-	0	Parent=FBgn0005777.1.mrna1;Target=FBgn0005777.1 1 196 +
Chr2	gffcl	locus	159604903	159607542	.	+	.	ID=RLOC_00023370;geneIDs=FBgn0037739.1.path1;transcripts=FBgn0037739.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159604903	159607542	.	+	.	ID=FBgn0037739.1.mrna1;geneID=FBgn0037739.1.path1;Name=FBgn0037739.1;Dir=sensecoverage=100.0;identity=100.0;matches=606;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023370
Chr2	stalkie_big_nohaplotig	exon	159604903	159605118	100	+	.	Parent=FBgn0037739.1.mrna1;Target=FBgn0037739.1 1 216 +
Chr2	stalkie_big_nohaplotig	exon	159607153	159607542	100	+	.	Parent=FBgn0037739.1.mrna1;Target=FBgn0037739.1 217 606 +
Chr2	stalkie_big_nohaplotig	CDS	159604903	159605118	.	+	0	Parent=FBgn0037739.1.mrna1;Target=FBgn0037739.1 1 216 +
Chr2	stalkie_big_nohaplotig	CDS	159607153	159607542	.	+	0	Parent=FBgn0037739.1.mrna1;Target=FBgn0037739.1 217 606 +
Chr2	gffcl	locus	159611528	159623849	.	+	.	ID=RLOC_00023371;geneIDs=FBgn0085438.1.path1,comp161414_c0_seq1.path1;transcripts=FBgn0085438.1.mrna1,comp161414_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159611528	159623847	.	+	.	ID=FBgn0085438.1.mrna1;geneID=FBgn0085438.1.path1;Name=FBgn0085438.1;Dir=sensecoverage=100.0;identity=99.0;matches=1348;mismatches=14;indels=0;unknowns=0;locus=RLOC_00023371
Chr2	stalkie_big_nohaplotig	exon	159611528	159611600	100	+	.	Parent=FBgn0085438.1.mrna1;Target=FBgn0085438.1 1 73 +
Chr2	stalkie_big_nohaplotig	exon	159619979	159620869	98	+	.	Parent=FBgn0085438.1.mrna1;Target=FBgn0085438.1 74 964 +
Chr2	stalkie_big_nohaplotig	exon	159623322	159623424	100	+	.	Parent=FBgn0085438.1.mrna1;Target=FBgn0085438.1 965 1067 +
Chr2	stalkie_big_nohaplotig	exon	159623489	159623667	98	+	.	Parent=FBgn0085438.1.mrna1;Target=FBgn0085438.1 1068 1246 +
Chr2	stalkie_big_nohaplotig	exon	159623732	159623847	100	+	.	Parent=FBgn0085438.1.mrna1;Target=FBgn0085438.1 1247 1362 +
Chr2	stalkie_big_nohaplotig	CDS	159611528	159611600	.	+	0	Parent=FBgn0085438.1.mrna1;Target=FBgn0085438.1 1 73 +
Chr2	stalkie_big_nohaplotig	CDS	159619979	159620869	.	+	2	Parent=FBgn0085438.1.mrna1;Target=FBgn0085438.1 74 964 +
Chr2	stalkie_big_nohaplotig	CDS	159623322	159623424	.	+	2	Parent=FBgn0085438.1.mrna1;Target=FBgn0085438.1 965 1067 +
Chr2	stalkie_big_nohaplotig	CDS	159623489	159623667	.	+	1	Parent=FBgn0085438.1.mrna1;Target=FBgn0085438.1 1068 1246 +
Chr2	stalkie_big_nohaplotig	CDS	159623732	159623847	.	+	2	Parent=FBgn0085438.1.mrna1;Target=FBgn0085438.1 1247 1362 +
Chr2	stalkie_big_nohaplotig	mRNA	159616902	159623849	.	+	.	ID=comp161414_c0_seq1.mrna1;geneID=comp161414_c0_seq1.path1;Name=comp161414_c0_seq1;Dir=antisensecoverage=100.0;identity=99.0;matches=1458;mismatches=14;indels=0;unknowns=0;locus=RLOC_00023371
Chr2	stalkie_big_nohaplotig	exon	159616902	159617018	100	+	.	Parent=comp161414_c0_seq1.mrna1;Target=comp161414_c0_seq1 1356 1472 -
Chr2	stalkie_big_nohaplotig	exon	159619979	159620869	98	+	.	Parent=comp161414_c0_seq1.mrna1;Target=comp161414_c0_seq1 465 1355 -
Chr2	stalkie_big_nohaplotig	exon	159623322	159623667	99	+	.	Parent=comp161414_c0_seq1.mrna1;Target=comp161414_c0_seq1 119 464 -
Chr2	stalkie_big_nohaplotig	exon	159623732	159623849	100	+	.	Parent=comp161414_c0_seq1.mrna1;Target=comp161414_c0_seq1 1 118 -
Chr2	stalkie_big_nohaplotig	CDS	159616958	159617018	.	+	0	Parent=comp161414_c0_seq1.mrna1;Target=comp161414_c0_seq1 1356 1416 .
Chr2	stalkie_big_nohaplotig	CDS	159619979	159620869	.	+	2	Parent=comp161414_c0_seq1.mrna1;Target=comp161414_c0_seq1 465 1355 .
Chr2	stalkie_big_nohaplotig	CDS	159623322	159623545	.	+	2	Parent=comp161414_c0_seq1.mrna1;Target=comp161414_c0_seq1 241 464 .
Chr2	gffcl	locus	159631175	159631560	.	+	.	ID=RLOC_00023372;geneIDs=FBgn0053870.2.path10;transcripts=FBgn0053870.2.mrna10
Chr2	stalkie_big_nohaplotig	mRNA	159631175	159631560	.	+	.	ID=FBgn0053870.2.mrna10;geneID=FBgn0053870.2.path10;Name=FBgn0053870.2;Dir=indeterminatecoverage=99.7;identity=100.0;matches=386;mismatches=0;indels=0;unknowns=0;Target=FBgn0053870.2 387 2 .;CDS_Target=FBgn0053870.2 387 4 .;locus=RLOC_00023372
Chr2	stalkie_big_nohaplotig	exon	159631175	159631560	100	+	.	Parent=FBgn0053870.2.mrna10
Chr2	stalkie_big_nohaplotig	CDS	159631177	159631560	.	+	0	Parent=FBgn0053870.2.mrna10
Chr2	gffcl	locus	159636336	159640887	.	+	.	ID=RLOC_00023373;geneIDs=comp156926_c6_seq1.path2;transcripts=comp156926_c6_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	159636336	159640887	.	+	.	ID=comp156926_c6_seq1.mrna2;geneID=comp156926_c6_seq1.path2;Name=comp156926_c6_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=4544;mismatches=8;indels=0;unknowns=0;Target=comp156926_c6_seq1 4552 1 .;CDS_Target=comp156926_c6_seq1 2238 1873 .;locus=RLOC_00023373
Chr2	stalkie_big_nohaplotig	exon	159636336	159640887	99	+	.	Parent=comp156926_c6_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	159638208	159638573	.	+	0	Parent=comp156926_c6_seq1.mrna2
Chr2	gffcl	locus	159649521	159649907	.	+	.	ID=RLOC_00023375;geneIDs=FBgn0053817.2.path10;transcripts=FBgn0053817.2.mrna10
Chr2	stalkie_big_nohaplotig	mRNA	159649521	159649907	.	+	.	ID=FBgn0053817.2.mrna10;geneID=FBgn0053817.2.path10;Name=FBgn0053817.2;Dir=indeterminatecoverage=100.0;identity=100.0;matches=387;mismatches=0;indels=0;unknowns=0;Target=FBgn0053817.2 387 1 .;locus=RLOC_00023375
Chr2	stalkie_big_nohaplotig	exon	159649521	159649907	100	+	.	Parent=FBgn0053817.2.mrna10
Chr2	stalkie_big_nohaplotig	CDS	159649521	159649907	.	+	0	Parent=FBgn0053817.2.mrna10
Chr2	gffcl	locus	159650227	159660562	.	-	.	ID=RLOC_00023376;geneIDs=FBgn0037549.3.path2,comp156373_c1_seq1.path2;transcripts=FBgn0037549.3.mrna2,comp156373_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	159650227	159660230	.	-	.	ID=FBgn0037549.3.mrna2;geneID=FBgn0037549.3.path2;Name=FBgn0037549.3;Dir=sensecoverage=97.3;identity=90.9;matches=1435;mismatches=132;indels=11;unknowns=0;locus=RLOC_00023376
Chr2	stalkie_big_nohaplotig	exon	159650227	159650260	94	-	.	Parent=FBgn0037549.3.mrna2;Target=FBgn0037549.3 1576 1609 +
Chr2	stalkie_big_nohaplotig	exon	159655031	159655044	100	-	.	Parent=FBgn0037549.3.mrna2;Target=FBgn0037549.3 1551 1564 +
Chr2	stalkie_big_nohaplotig	exon	159655887	159655969	75	-	.	Parent=FBgn0037549.3.mrna2;Target=FBgn0037549.3 1468 1550 +
Chr2	stalkie_big_nohaplotig	exon	159658561	159658951	79	-	.	Parent=FBgn0037549.3.mrna2;Target=FBgn0037549.3 1077 1467 +
Chr2	stalkie_big_nohaplotig	exon	159659021	159659526	92	-	.	Parent=FBgn0037549.3.mrna2;Target=FBgn0037549.3 580 1076 +
Chr2	stalkie_big_nohaplotig	exon	159659610	159659723	100	-	.	Parent=FBgn0037549.3.mrna2;Target=FBgn0037549.3 466 579 +
Chr2	stalkie_big_nohaplotig	exon	159659796	159660230	99	-	.	Parent=FBgn0037549.3.mrna2;Target=FBgn0037549.3 31 465 +
Chr2	stalkie_big_nohaplotig	CDS	159650228	159650260	.	-	2	Parent=FBgn0037549.3.mrna2;Target=FBgn0037549.3 1576 1608 +
Chr2	stalkie_big_nohaplotig	CDS	159655031	159655044	.	-	1	Parent=FBgn0037549.3.mrna2;Target=FBgn0037549.3 1551 1564 +
Chr2	stalkie_big_nohaplotig	CDS	159655887	159655969	.	-	0	Parent=FBgn0037549.3.mrna2;Target=FBgn0037549.3 1468 1550 +
Chr2	stalkie_big_nohaplotig	CDS	159658561	159658951	.	-	1	Parent=FBgn0037549.3.mrna2;Target=FBgn0037549.3 1077 1467 +
Chr2	stalkie_big_nohaplotig	CDS	159659021	159659526	.	-	0	Parent=FBgn0037549.3.mrna2;Target=FBgn0037549.3 580 1076 +
Chr2	stalkie_big_nohaplotig	CDS	159659610	159659723	.	-	0	Parent=FBgn0037549.3.mrna2;Target=FBgn0037549.3 466 579 +
Chr2	stalkie_big_nohaplotig	CDS	159659796	159660230	.	-	0	Parent=FBgn0037549.3.mrna2;Target=FBgn0037549.3 31 465 +
Chr2	stalkie_big_nohaplotig	mRNA	159660207	159660562	.	-	.	ID=comp156373_c1_seq1.mrna2;geneID=comp156373_c1_seq1.path2;Name=comp156373_c1_seq1;Dir=antisensecoverage=70.3;identity=98.3;matches=294;mismatches=2;indels=3;unknowns=0;Target=comp156373_c1_seq1 110 199 .;locus=RLOC_00023376
Chr2	stalkie_big_nohaplotig	exon	159660207	159660229	100	-	.	Parent=comp156373_c1_seq1.mrna2;Target=comp156373_c1_seq1 1 23 -
Chr2	stalkie_big_nohaplotig	exon	159660287	159660562	98	-	.	Parent=comp156373_c1_seq1.mrna2;Target=comp156373_c1_seq1 24 296 -
Chr2	stalkie_big_nohaplotig	CDS	159660376	159660465	.	-	0	Parent=comp156373_c1_seq1.mrna2
Chr2	gffcl	locus	159656925	159658116	.	+	.	ID=RLOC_00023377;geneIDs=ORF1194.path1;transcripts=ORF1194.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159656925	159658116	.	+	.	ID=ORF1194.mrna1;geneID=ORF1194.path1;Name=ORF1194;Dir=indeterminatecoverage=99.8;identity=99.7;matches=1188;mismatches=4;indels=0;unknowns=0;Target=ORF1194 1194 3 .;CDS_Target=ORF1194 1194 4 .;locus=RLOC_00023377
Chr2	stalkie_big_nohaplotig	exon	159656925	159658116	99	+	.	Parent=ORF1194.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159656926	159658116	.	+	0	Parent=ORF1194.mrna1
Chr2	gffcl	locus	159669032	159715171	.	-	.	ID=RLOC_00023378;geneIDs=FBgn0003334.1.path1,comp163235_c0_seq1.path1;transcripts=FBgn0003334.1.mrna1,comp163235_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159669032	159714596	.	-	.	ID=FBgn0003334.1.mrna1;geneID=FBgn0003334.1.path1;Name=FBgn0003334.1;Dir=sensecoverage=100.0;identity=99.9;matches=2409;mismatches=3;indels=0;unknowns=0;locus=RLOC_00023378
Chr2	stalkie_big_nohaplotig	exon	159669032	159669166	100	-	.	Parent=FBgn0003334.1.mrna1;Target=FBgn0003334.1 2278 2412 +
Chr2	stalkie_big_nohaplotig	exon	159669231	159669737	99	-	.	Parent=FBgn0003334.1.mrna1;Target=FBgn0003334.1 1771 2277 +
Chr2	stalkie_big_nohaplotig	exon	159669805	159670149	100	-	.	Parent=FBgn0003334.1.mrna1;Target=FBgn0003334.1 1426 1770 +
Chr2	stalkie_big_nohaplotig	exon	159670224	159671147	100	-	.	Parent=FBgn0003334.1.mrna1;Target=FBgn0003334.1 502 1425 +
Chr2	stalkie_big_nohaplotig	exon	159714096	159714596	99	-	.	Parent=FBgn0003334.1.mrna1;Target=FBgn0003334.1 1 501 +
Chr2	stalkie_big_nohaplotig	CDS	159669032	159669166	.	-	0	Parent=FBgn0003334.1.mrna1;Target=FBgn0003334.1 2278 2412 +
Chr2	stalkie_big_nohaplotig	CDS	159669231	159669737	.	-	0	Parent=FBgn0003334.1.mrna1;Target=FBgn0003334.1 1771 2277 +
Chr2	stalkie_big_nohaplotig	CDS	159669805	159670149	.	-	0	Parent=FBgn0003334.1.mrna1;Target=FBgn0003334.1 1426 1770 +
Chr2	stalkie_big_nohaplotig	CDS	159670224	159671147	.	-	0	Parent=FBgn0003334.1.mrna1;Target=FBgn0003334.1 502 1425 +
Chr2	stalkie_big_nohaplotig	CDS	159714096	159714596	.	-	0	Parent=FBgn0003334.1.mrna1;Target=FBgn0003334.1 1 501 +
Chr2	stalkie_big_nohaplotig	mRNA	159702427	159715171	.	-	.	ID=comp163235_c0_seq1.mrna1;geneID=comp163235_c0_seq1.path1;Name=comp163235_c0_seq1;Dir=antisensecoverage=100.0;identity=96.5;matches=4172;mismatches=77;indels=73;unknowns=0;locus=RLOC_00023378
Chr2	stalkie_big_nohaplotig	exon	159702427	159702606	99	-	.	Parent=comp163235_c0_seq1.mrna1;Target=comp163235_c0_seq1 1 180 -
Chr2	stalkie_big_nohaplotig	exon	159702695	159702753	100	-	.	Parent=comp163235_c0_seq1.mrna1;Target=comp163235_c0_seq1 181 239 -
Chr2	stalkie_big_nohaplotig	exon	159705879	159706965	88	-	.	Parent=comp163235_c0_seq1.mrna1;Target=comp163235_c0_seq1 240 1340 -
Chr2	stalkie_big_nohaplotig	exon	159711956	159712051	100	-	.	Parent=comp163235_c0_seq1.mrna1;Target=comp163235_c0_seq1 1341 1436 -
Chr2	stalkie_big_nohaplotig	exon	159712116	159712622	99	-	.	Parent=comp163235_c0_seq1.mrna1;Target=comp163235_c0_seq1 1437 1943 -
Chr2	stalkie_big_nohaplotig	exon	159712690	159713034	99	-	.	Parent=comp163235_c0_seq1.mrna1;Target=comp163235_c0_seq1 1944 2288 -
Chr2	stalkie_big_nohaplotig	exon	159713109	159714032	100	-	.	Parent=comp163235_c0_seq1.mrna1;Target=comp163235_c0_seq1 2289 3212 -
Chr2	stalkie_big_nohaplotig	exon	159714096	159715171	98	-	.	Parent=comp163235_c0_seq1.mrna1;Target=comp163235_c0_seq1 3213 4297 -
Chr2	stalkie_big_nohaplotig	CDS	159706924	159706965	.	-	0	Parent=comp163235_c0_seq1.mrna1;Target=comp163235_c0_seq1 1299 1340 .
Chr2	stalkie_big_nohaplotig	CDS	159711956	159712051	.	-	0	Parent=comp163235_c0_seq1.mrna1;Target=comp163235_c0_seq1 1341 1436 .
Chr2	stalkie_big_nohaplotig	CDS	159712116	159712622	.	-	0	Parent=comp163235_c0_seq1.mrna1;Target=comp163235_c0_seq1 1437 1943 .
Chr2	stalkie_big_nohaplotig	CDS	159712690	159713034	.	-	0	Parent=comp163235_c0_seq1.mrna1;Target=comp163235_c0_seq1 1944 2288 .
Chr2	stalkie_big_nohaplotig	CDS	159713109	159714032	.	-	0	Parent=comp163235_c0_seq1.mrna1;Target=comp163235_c0_seq1 2289 3212 .
Chr2	stalkie_big_nohaplotig	CDS	159714096	159714581	.	-	0	Parent=comp163235_c0_seq1.mrna1;Target=comp163235_c0_seq1 3213 3698 .
Chr2	gffcl	locus	159720267	159720663	.	-	.	ID=RLOC_00023381;geneIDs=comp5068_c1_seq1.path1;transcripts=comp5068_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159720267	159720663	.	-	.	ID=comp5068_c1_seq1.mrna1;geneID=comp5068_c1_seq1.path1;Name=comp5068_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=395;mismatches=2;indels=0;unknowns=0;Target=comp5068_c1_seq1 397 1 .;CDS_Target=comp5068_c1_seq1 272 153 .;locus=RLOC_00023381
Chr2	stalkie_big_nohaplotig	exon	159720267	159720663	99	-	.	Parent=comp5068_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159720392	159720511	.	-	0	Parent=comp5068_c1_seq1.mrna1
Chr2	gffcl	locus	159731744	159732876	.	-	.	ID=RLOC_00023382;geneIDs=comp163325_c0_seq1.path3;transcripts=comp163325_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	159731744	159732876	.	-	.	ID=comp163325_c0_seq1.mrna3;geneID=comp163325_c0_seq1.path3;Name=comp163325_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1132;mismatches=1;indels=0;unknowns=0;Target=comp163325_c0_seq1 1133 1 .;CDS_Target=comp163325_c0_seq1 255 1 .;locus=RLOC_00023382
Chr2	stalkie_big_nohaplotig	exon	159731744	159732876	99	-	.	Parent=comp163325_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	CDS	159732622	159732876	.	-	0	Parent=comp163325_c0_seq1.mrna3
Chr2	gffcl	locus	159735214	159753863	.	+	.	ID=RLOC_00023383;geneIDs=comp148799_c1_seq1.path1;transcripts=comp148799_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159735214	159753863	.	+	.	ID=comp148799_c1_seq1.mrna1;geneID=comp148799_c1_seq1.path1;Name=comp148799_c1_seq1;Dir=sensecoverage=99.9;identity=98.3;matches=1057;mismatches=9;indels=9;unknowns=0;Target=comp148799_c1_seq1 4 216 +;locus=RLOC_00023383
Chr2	stalkie_big_nohaplotig	exon	159735214	159735478	95	+	.	Parent=comp148799_c1_seq1.mrna1;Target=comp148799_c1_seq1 2 258 +
Chr2	stalkie_big_nohaplotig	exon	159739192	159739276	100	+	.	Parent=comp148799_c1_seq1.mrna1;Target=comp148799_c1_seq1 259 343 +
Chr2	stalkie_big_nohaplotig	exon	159748905	159749611	99	+	.	Parent=comp148799_c1_seq1.mrna1;Target=comp148799_c1_seq1 344 1049 +
Chr2	stalkie_big_nohaplotig	exon	159753846	159753863	100	+	.	Parent=comp148799_c1_seq1.mrna1;Target=comp148799_c1_seq1 1050 1067 +
Chr2	stalkie_big_nohaplotig	CDS	159735216	159735436	.	+	0	Parent=comp148799_c1_seq1.mrna1
Chr2	gffcl	locus	159834865	159840234	.	+	.	ID=RLOC_00023385;geneIDs=FBgn0037941.1.path2;transcripts=FBgn0037941.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	159834865	159840234	.	+	.	ID=FBgn0037941.1.mrna2;geneID=FBgn0037941.1.path2;Name=FBgn0037941.1;Dir=sensecoverage=91.6;identity=100.0;matches=1520;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023385
Chr2	stalkie_big_nohaplotig	exon	159834865	159835650	100	+	.	Parent=FBgn0037941.1.mrna2;Target=FBgn0037941.1 140 925 +
Chr2	stalkie_big_nohaplotig	exon	159835919	159836229	100	+	.	Parent=FBgn0037941.1.mrna2;Target=FBgn0037941.1 926 1236 +
Chr2	stalkie_big_nohaplotig	exon	159837125	159837297	100	+	.	Parent=FBgn0037941.1.mrna2;Target=FBgn0037941.1 1237 1409 +
Chr2	stalkie_big_nohaplotig	exon	159839482	159839605	100	+	.	Parent=FBgn0037941.1.mrna2;Target=FBgn0037941.1 1410 1533 +
Chr2	stalkie_big_nohaplotig	exon	159840109	159840234	100	+	.	Parent=FBgn0037941.1.mrna2;Target=FBgn0037941.1 1534 1659 +
Chr2	stalkie_big_nohaplotig	CDS	159834865	159835650	.	+	1	Parent=FBgn0037941.1.mrna2;Target=FBgn0037941.1 140 925 +
Chr2	stalkie_big_nohaplotig	CDS	159835919	159836229	.	+	1	Parent=FBgn0037941.1.mrna2;Target=FBgn0037941.1 926 1236 +
Chr2	stalkie_big_nohaplotig	CDS	159837125	159837297	.	+	2	Parent=FBgn0037941.1.mrna2;Target=FBgn0037941.1 1237 1409 +
Chr2	stalkie_big_nohaplotig	CDS	159839482	159839605	.	+	0	Parent=FBgn0037941.1.mrna2;Target=FBgn0037941.1 1410 1533 +
Chr2	stalkie_big_nohaplotig	CDS	159840109	159840234	.	+	2	Parent=FBgn0037941.1.mrna2;Target=FBgn0037941.1 1534 1659 +
Chr2	gffcl	locus	159841136	159841566	.	-	.	ID=RLOC_00023386;geneIDs=comp150945_c0_seq1.path1;transcripts=comp150945_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159841136	159841566	.	-	.	ID=comp150945_c0_seq1.mrna1;geneID=comp150945_c0_seq1.path1;Name=comp150945_c0_seq1;Dir=indeterminatecoverage=99.5;identity=95.4;matches=415;mismatches=16;indels=4;unknowns=0;Target=comp150945_c0_seq1 437 3 .;CDS_Target=comp150945_c0_seq1 393 358 .;locus=RLOC_00023386
Chr2	stalkie_big_nohaplotig	exon	159841136	159841566	95	-	.	Parent=comp150945_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159841180	159841211	.	-	0	Parent=comp150945_c0_seq1.mrna1
Chr2	gffcl	locus	159841649	159842485	.	+	.	ID=RLOC_00023387;geneIDs=comp161149_c0_seq1.path1;transcripts=comp161149_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159841649	159842485	.	+	.	ID=comp161149_c0_seq1.mrna1;geneID=comp161149_c0_seq1.path1;Name=comp161149_c0_seq1;Dir=indeterminatecoverage=100.0;identity=96.8;matches=830;mismatches=7;indels=20;unknowns=0;Target=comp161149_c0_seq1 857 1 .;CDS_Target=comp161149_c0_seq1 548 504 .;locus=RLOC_00023387
Chr2	stalkie_big_nohaplotig	exon	159841649	159842485	96	+	.	Parent=comp161149_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159842152	159842192	.	+	0	Parent=comp161149_c0_seq1.mrna1
Chr2	gffcl	locus	159842748	159843125	.	-	.	ID=RLOC_00023388;geneIDs=comp135738_c0_seq1.path1;transcripts=comp135738_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159842748	159843125	.	-	.	ID=comp135738_c0_seq1.mrna1;geneID=comp135738_c0_seq1.path1;Name=comp135738_c0_seq1;Dir=indeterminatecoverage=95.9;identity=99.2;matches=376;mismatches=2;indels=1;unknowns=0;Target=comp135738_c0_seq1 395 17 .;CDS_Target=comp135738_c0_seq1 133 17 .;locus=RLOC_00023388
Chr2	stalkie_big_nohaplotig	exon	159842748	159843125	99	-	.	Parent=comp135738_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159843009	159843125	.	-	0	Parent=comp135738_c0_seq1.mrna1
Chr2	gffcl	locus	159857271	159858860	.	+	.	ID=RLOC_00023389;geneIDs=comp158099_c0_seq1.path1;transcripts=comp158099_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	159857271	159858860	.	+	.	ID=comp158099_c0_seq1.mrna1;geneID=comp158099_c0_seq1.path1;Name=comp158099_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=1564;mismatches=16;indels=11;unknowns=0;Target=comp158099_c0_seq1 1581 1 .;CDS_Target=comp158099_c0_seq1 1285 1094 .;locus=RLOC_00023389
Chr2	stalkie_big_nohaplotig	exon	159857271	159858860	98	+	.	Parent=comp158099_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	159858373	159858564	.	+	0	Parent=comp158099_c0_seq1.mrna1
Chr2	gffcl	locus	159918018	159918488	.	-	.	ID=RLOC_00023393;geneIDs=comp160464_c4_seq1.path2;transcripts=comp160464_c4_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	159918018	159918488	.	-	.	ID=comp160464_c4_seq1.mrna2;geneID=comp160464_c4_seq1.path2;Name=comp160464_c4_seq1;Dir=indeterminatecoverage=37.8;identity=98.7;matches=468;mismatches=3;indels=3;unknowns=0;Target=comp160464_c4_seq1 1253 780 .;CDS_Target=comp160464_c4_seq1 790 780 .;locus=RLOC_00023393
Chr2	stalkie_big_nohaplotig	exon	159918018	159918488	98	-	.	Parent=comp160464_c4_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	159918478	159918488	.	-	1	Parent=comp160464_c4_seq1.mrna2
Chr2	gffcl	locus	160043683	160047886	.	+	.	ID=RLOC_00023394;geneIDs=FBgn0035024.5.path1;transcripts=FBgn0035024.5.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160043683	160047886	.	+	.	ID=FBgn0035024.5.mrna1;geneID=FBgn0035024.5.path1;Name=FBgn0035024.5;Dir=sensecoverage=100.0;identity=98.1;matches=1904;mismatches=28;indels=8;unknowns=0;Target=FBgn0035024.5 154 1935 +;locus=RLOC_00023394
Chr2	stalkie_big_nohaplotig	exon	160043683	160043782	93	+	.	Parent=FBgn0035024.5.mrna1;Target=FBgn0035024.5 1 95 +
Chr2	stalkie_big_nohaplotig	exon	160046050	160047886	98	+	.	Parent=FBgn0035024.5.mrna1;Target=FBgn0035024.5 96 1935 +
Chr2	stalkie_big_nohaplotig	CDS	160046108	160047886	.	+	0	Parent=FBgn0035024.5.mrna1
Chr2	gffcl	locus	160077138	160104554	.	+	.	ID=RLOC_00023395;geneIDs=FBgn0264339.path1;transcripts=FBgn0264339.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160077138	160104554	.	+	.	ID=FBgn0264339.mrna1;geneID=FBgn0264339.path1;Name=FBgn0264339;Dir=sensecoverage=100.0;identity=99.5;matches=2508;mismatches=12;indels=0;unknowns=0;locus=RLOC_00023395
Chr2	stalkie_big_nohaplotig	exon	160077138	160077338	99	+	.	Parent=FBgn0264339.mrna1;Target=FBgn0264339 1 201 +
Chr2	stalkie_big_nohaplotig	exon	160079803	160079871	100	+	.	Parent=FBgn0264339.mrna1;Target=FBgn0264339 202 270 +
Chr2	stalkie_big_nohaplotig	exon	160084492	160084601	100	+	.	Parent=FBgn0264339.mrna1;Target=FBgn0264339 271 380 +
Chr2	stalkie_big_nohaplotig	exon	160085055	160085269	99	+	.	Parent=FBgn0264339.mrna1;Target=FBgn0264339 381 595 +
Chr2	stalkie_big_nohaplotig	exon	160095596	160095734	100	+	.	Parent=FBgn0264339.mrna1;Target=FBgn0264339 596 734 +
Chr2	stalkie_big_nohaplotig	exon	160095898	160096003	100	+	.	Parent=FBgn0264339.mrna1;Target=FBgn0264339 735 840 +
Chr2	stalkie_big_nohaplotig	exon	160096129	160096288	100	+	.	Parent=FBgn0264339.mrna1;Target=FBgn0264339 841 1000 +
Chr2	stalkie_big_nohaplotig	exon	160103035	160104554	99	+	.	Parent=FBgn0264339.mrna1;Target=FBgn0264339 1001 2520 +
Chr2	stalkie_big_nohaplotig	CDS	160077138	160077338	.	+	0	Parent=FBgn0264339.mrna1;Target=FBgn0264339 1 201 +
Chr2	stalkie_big_nohaplotig	CDS	160079803	160079871	.	+	0	Parent=FBgn0264339.mrna1;Target=FBgn0264339 202 270 +
Chr2	stalkie_big_nohaplotig	CDS	160084492	160084601	.	+	0	Parent=FBgn0264339.mrna1;Target=FBgn0264339 271 380 +
Chr2	stalkie_big_nohaplotig	CDS	160085055	160085269	.	+	1	Parent=FBgn0264339.mrna1;Target=FBgn0264339 381 595 +
Chr2	stalkie_big_nohaplotig	CDS	160095596	160095734	.	+	2	Parent=FBgn0264339.mrna1;Target=FBgn0264339 596 734 +
Chr2	stalkie_big_nohaplotig	CDS	160095898	160096003	.	+	1	Parent=FBgn0264339.mrna1;Target=FBgn0264339 735 840 +
Chr2	stalkie_big_nohaplotig	CDS	160096129	160096288	.	+	0	Parent=FBgn0264339.mrna1;Target=FBgn0264339 841 1000 +
Chr2	stalkie_big_nohaplotig	CDS	160103035	160104554	.	+	2	Parent=FBgn0264339.mrna1;Target=FBgn0264339 1001 2520 +
Chr2	gffcl	locus	160082235	160082852	.	+	.	ID=RLOC_00023396;geneIDs=comp65154_c0_seq1.path1;transcripts=comp65154_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160082235	160082852	.	+	.	ID=comp65154_c0_seq1.mrna1;geneID=comp65154_c0_seq1.path1;Name=comp65154_c0_seq1;Dir=sensecoverage=99.3;identity=99.8;matches=551;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023396
Chr2	stalkie_big_nohaplotig	exon	160082235	160082394	100	+	.	Parent=comp65154_c0_seq1.mrna1;Target=comp65154_c0_seq1 2 161 +
Chr2	stalkie_big_nohaplotig	exon	160082461	160082852	99	+	.	Parent=comp65154_c0_seq1.mrna1;Target=comp65154_c0_seq1 162 553 +
Chr2	stalkie_big_nohaplotig	CDS	160082377	160082394	.	+	0	Parent=comp65154_c0_seq1.mrna1;Target=comp65154_c0_seq1 144 161 +
Chr2	stalkie_big_nohaplotig	CDS	160082461	160082727	.	+	0	Parent=comp65154_c0_seq1.mrna1;Target=comp65154_c0_seq1 162 428 +
Chr2	gffcl	locus	160104941	160105653	.	-	.	ID=RLOC_00023397;geneIDs=comp157215_c0_seq1.path1;transcripts=comp157215_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160104941	160105653	.	-	.	ID=comp157215_c0_seq1.mrna1;geneID=comp157215_c0_seq1.path1;Name=comp157215_c0_seq1;Dir=indeterminatecoverage=99.7;identity=96.1;matches=688;mismatches=22;indels=6;unknowns=0;Target=comp157215_c0_seq1 713 1 .;CDS_Target=comp157215_c0_seq1 713 630 .;locus=RLOC_00023397
Chr2	stalkie_big_nohaplotig	exon	160104941	160105653	96	-	.	Parent=comp157215_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	160104941	160105027	.	-	0	Parent=comp157215_c0_seq1.mrna1
Chr2	gffcl	locus	160105691	160106067	.	-	.	ID=RLOC_00023398;geneIDs=comp144039_c0_seq1.path1;transcripts=comp144039_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160105691	160106067	.	-	.	ID=comp144039_c0_seq1.mrna1;geneID=comp144039_c0_seq1.path1;Name=comp144039_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=372;mismatches=5;indels=2;unknowns=0;Target=comp144039_c0_seq1 379 1 .;CDS_Target=comp144039_c0_seq1 55 2 .;locus=RLOC_00023398
Chr2	stalkie_big_nohaplotig	exon	160105691	160106067	98	-	.	Parent=comp144039_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	160106013	160106066	.	-	0	Parent=comp144039_c0_seq1.mrna1
Chr2	gffcl	locus	160149774	160150507	.	+	.	ID=RLOC_00023399;geneIDs=FBgn0034769.1.path1;transcripts=FBgn0034769.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160149774	160150507	.	+	.	ID=FBgn0034769.1.mrna1;geneID=FBgn0034769.1.path1;Name=FBgn0034769.1;Dir=sensecoverage=100.0;identity=100.0;matches=609;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023399
Chr2	stalkie_big_nohaplotig	exon	160149774	160149827	100	+	.	Parent=FBgn0034769.1.mrna1;Target=FBgn0034769.1 1 54 +
Chr2	stalkie_big_nohaplotig	exon	160149898	160150246	100	+	.	Parent=FBgn0034769.1.mrna1;Target=FBgn0034769.1 55 403 +
Chr2	stalkie_big_nohaplotig	exon	160150302	160150507	100	+	.	Parent=FBgn0034769.1.mrna1;Target=FBgn0034769.1 404 609 +
Chr2	stalkie_big_nohaplotig	CDS	160149774	160149827	.	+	0	Parent=FBgn0034769.1.mrna1;Target=FBgn0034769.1 1 54 +
Chr2	stalkie_big_nohaplotig	CDS	160149898	160150246	.	+	0	Parent=FBgn0034769.1.mrna1;Target=FBgn0034769.1 55 403 +
Chr2	stalkie_big_nohaplotig	CDS	160150302	160150507	.	+	2	Parent=FBgn0034769.1.mrna1;Target=FBgn0034769.1 404 609 +
Chr2	gffcl	locus	160153241	160154029	.	-	.	ID=RLOC_00023400;geneIDs=FBgn0034769.2.path2;transcripts=FBgn0034769.2.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	160153241	160154029	.	-	.	ID=FBgn0034769.2.mrna2;geneID=FBgn0034769.2.path2;Name=FBgn0034769.2;Dir=sensecoverage=100.0;identity=99.1;matches=642;mismatches=6;indels=0;unknowns=0;locus=RLOC_00023400
Chr2	stalkie_big_nohaplotig	exon	160153241	160153446	99	-	.	Parent=FBgn0034769.2.mrna2;Target=FBgn0034769.2 443 648 +
Chr2	stalkie_big_nohaplotig	exon	160153520	160153871	99	-	.	Parent=FBgn0034769.2.mrna2;Target=FBgn0034769.2 91 442 +
Chr2	stalkie_big_nohaplotig	exon	160153940	160154029	95	-	.	Parent=FBgn0034769.2.mrna2;Target=FBgn0034769.2 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	160153241	160153446	.	-	2	Parent=FBgn0034769.2.mrna2;Target=FBgn0034769.2 443 648 +
Chr2	stalkie_big_nohaplotig	CDS	160153520	160153871	.	-	0	Parent=FBgn0034769.2.mrna2;Target=FBgn0034769.2 91 442 +
Chr2	stalkie_big_nohaplotig	CDS	160153940	160153984	.	-	0	Parent=FBgn0034769.2.mrna2;Target=FBgn0034769.2 46 90 +
Chr2	gffcl	locus	160192960	160227612	.	-	.	ID=RLOC_00023401;geneIDs=AAEL006882.1.path1;transcripts=AAEL006882.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160192960	160227612	.	-	.	ID=AAEL006882.1.mrna1;geneID=AAEL006882.1.path1;Name=AAEL006882.1;Dir=sensecoverage=16.8;identity=97.9;matches=140;mismatches=3;indels=0;unknowns=0;locus=RLOC_00023401
Chr2	stalkie_big_nohaplotig	exon	160192960	160193033	97	-	.	Parent=AAEL006882.1.mrna1;Target=AAEL006882.1 70 143 +
Chr2	stalkie_big_nohaplotig	exon	160194390	160194435	97	-	.	Parent=AAEL006882.1.mrna1;Target=AAEL006882.1 24 69 +
Chr2	stalkie_big_nohaplotig	exon	160227590	160227612	100	-	.	Parent=AAEL006882.1.mrna1;Target=AAEL006882.1 1 23 +
Chr2	stalkie_big_nohaplotig	CDS	160192960	160193033	.	-	0	Parent=AAEL006882.1.mrna1;Target=AAEL006882.1 70 143 +
Chr2	stalkie_big_nohaplotig	CDS	160194390	160194435	.	-	1	Parent=AAEL006882.1.mrna1;Target=AAEL006882.1 24 69 +
Chr2	stalkie_big_nohaplotig	CDS	160227590	160227612	.	-	0	Parent=AAEL006882.1.mrna1;Target=AAEL006882.1 1 23 +
Chr2	gffcl	locus	160211112	160211477	.	+	.	ID=RLOC_00023402;geneIDs=comp1299319_c0_seq1.path1;transcripts=comp1299319_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160211112	160211477	.	+	.	ID=comp1299319_c0_seq1.mrna1;geneID=comp1299319_c0_seq1.path1;Name=comp1299319_c0_seq1;Dir=indeterminatecoverage=84.3;identity=97.0;matches=355;mismatches=11;indels=0;unknowns=0;Target=comp1299319_c0_seq1 434 69 .;CDS_Target=comp1299319_c0_seq1 236 93 .;locus=RLOC_00023402
Chr2	stalkie_big_nohaplotig	exon	160211112	160211477	96	+	.	Parent=comp1299319_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	160211136	160211279	.	+	0	Parent=comp1299319_c0_seq1.mrna1
Chr2	gffcl	locus	160381598	160382629	.	-	.	ID=RLOC_00023404;geneIDs=Dp_FBgn0244711.1.path9;transcripts=Dp_FBgn0244711.1.mrna9
Chr2	stalkie_big_nohaplotig	mRNA	160381598	160382629	.	-	.	ID=Dp_FBgn0244711.1.mrna9;geneID=Dp_FBgn0244711.1.path9;Name=Dp_FBgn0244711.1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1020;mismatches=12;indels=0;unknowns=0;Target=Dp_FBgn0244711.1 1032 1 .;locus=RLOC_00023404
Chr2	stalkie_big_nohaplotig	exon	160381598	160382629	98	-	.	Parent=Dp_FBgn0244711.1.mrna9
Chr2	stalkie_big_nohaplotig	CDS	160381598	160382629	.	-	0	Parent=Dp_FBgn0244711.1.mrna9
Chr2	gffcl	locus	160384181	160385334	.	-	.	ID=RLOC_00023405;geneIDs=comp163261_c0_seq1.path6;transcripts=comp163261_c0_seq1.mrna6
Chr2	stalkie_big_nohaplotig	mRNA	160384181	160385334	.	-	.	ID=comp163261_c0_seq1.mrna6;geneID=comp163261_c0_seq1.path6;Name=comp163261_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=1134;mismatches=20;indels=0;unknowns=0;Target=comp163261_c0_seq1 1154 1 .;CDS_Target=comp163261_c0_seq1 953 114 .;locus=RLOC_00023405
Chr2	stalkie_big_nohaplotig	exon	160384181	160385334	98	-	.	Parent=comp163261_c0_seq1.mrna6
Chr2	stalkie_big_nohaplotig	CDS	160384382	160385221	.	-	0	Parent=comp163261_c0_seq1.mrna6
Chr2	gffcl	locus	160389925	160415018	.	+	.	ID=RLOC_00023406;geneIDs=FBgn0033668.1.path1;transcripts=FBgn0033668.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160389925	160415018	.	+	.	ID=FBgn0033668.1.mrna1;geneID=FBgn0033668.1.path1;Name=FBgn0033668.1;Dir=sensecoverage=17.5;identity=99.3;matches=279;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023406
Chr2	stalkie_big_nohaplotig	exon	160389925	160390047	100	+	.	Parent=FBgn0033668.1.mrna1;Target=FBgn0033668.1 1 123 +
Chr2	stalkie_big_nohaplotig	exon	160414861	160415018	98	+	.	Parent=FBgn0033668.1.mrna1;Target=FBgn0033668.1 124 281 +
Chr2	stalkie_big_nohaplotig	CDS	160389925	160390047	.	+	0	Parent=FBgn0033668.1.mrna1;Target=FBgn0033668.1 1 123 +
Chr2	stalkie_big_nohaplotig	CDS	160414861	160415018	.	+	0	Parent=FBgn0033668.1.mrna1;Target=FBgn0033668.1 124 281 +
Chr2	gffcl	locus	160428958	160430037	.	+	.	ID=RLOC_00023407;geneIDs=ORF1499.path2;transcripts=ORF1499.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	160428958	160430037	.	+	.	ID=ORF1499.mrna2;geneID=ORF1499.path2;Name=ORF1499;Dir=indeterminatecoverage=100.0;identity=98.0;matches=1058;mismatches=22;indels=0;unknowns=0;Target=ORF1499 1080 1 .;locus=RLOC_00023407
Chr2	stalkie_big_nohaplotig	exon	160428958	160430037	97	+	.	Parent=ORF1499.mrna2
Chr2	stalkie_big_nohaplotig	CDS	160428958	160430037	.	+	0	Parent=ORF1499.mrna2
Chr2	gffcl	locus	160486766	160506450	.	-	.	ID=RLOC_00023409;geneIDs=FBgn0050339.3.path1;transcripts=FBgn0050339.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160486766	160506450	.	-	.	ID=FBgn0050339.3.mrna1;geneID=FBgn0050339.3.path1;Name=FBgn0050339.3;Dir=sensecoverage=100.0;identity=98.2;matches=925;mismatches=17;indels=0;unknowns=0;locus=RLOC_00023409
Chr2	stalkie_big_nohaplotig	exon	160486766	160487017	93	-	.	Parent=FBgn0050339.3.mrna1;Target=FBgn0050339.3 691 942 +
Chr2	stalkie_big_nohaplotig	exon	160487104	160487479	100	-	.	Parent=FBgn0050339.3.mrna1;Target=FBgn0050339.3 315 690 +
Chr2	stalkie_big_nohaplotig	exon	160506137	160506450	99	-	.	Parent=FBgn0050339.3.mrna1;Target=FBgn0050339.3 1 314 +
Chr2	stalkie_big_nohaplotig	CDS	160486766	160487017	.	-	0	Parent=FBgn0050339.3.mrna1;Target=FBgn0050339.3 691 942 +
Chr2	stalkie_big_nohaplotig	CDS	160487104	160487479	.	-	1	Parent=FBgn0050339.3.mrna1;Target=FBgn0050339.3 315 690 +
Chr2	stalkie_big_nohaplotig	CDS	160506137	160506450	.	-	0	Parent=FBgn0050339.3.mrna1;Target=FBgn0050339.3 1 314 +
Chr2	gffcl	locus	160490784	160510510	.	-	.	ID=RLOC_00023410;geneIDs=FBgn0050339.2.path1;transcripts=FBgn0050339.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160490784	160510510	.	-	.	ID=FBgn0050339.2.mrna1;geneID=FBgn0050339.2.path1;Name=FBgn0050339.2;Dir=sensecoverage=99.9;identity=98.4;matches=926;mismatches=15;indels=0;unknowns=0;locus=RLOC_00023410
Chr2	stalkie_big_nohaplotig	exon	160490784	160491035	99	-	.	Parent=FBgn0050339.2.mrna1;Target=FBgn0050339.2 691 942 +
Chr2	stalkie_big_nohaplotig	exon	160509748	160510123	96	-	.	Parent=FBgn0050339.2.mrna1;Target=FBgn0050339.2 315 690 +
Chr2	stalkie_big_nohaplotig	exon	160510198	160510510	99	-	.	Parent=FBgn0050339.2.mrna1;Target=FBgn0050339.2 2 314 +
Chr2	stalkie_big_nohaplotig	CDS	160490784	160491035	.	-	0	Parent=FBgn0050339.2.mrna1;Target=FBgn0050339.2 691 942 +
Chr2	stalkie_big_nohaplotig	CDS	160509748	160510123	.	-	1	Parent=FBgn0050339.2.mrna1;Target=FBgn0050339.2 315 690 +
Chr2	stalkie_big_nohaplotig	CDS	160510198	160510508	.	-	0	Parent=FBgn0050339.2.mrna1;Target=FBgn0050339.2 4 314 +
Chr2	gffcl	locus	160534859	160535467	.	+	.	ID=RLOC_00023411;geneIDs=FBgn0011695.1.path1;transcripts=FBgn0011695.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160534859	160535467	.	+	.	ID=FBgn0011695.1.mrna1;geneID=FBgn0011695.1.path1;Name=FBgn0011695.1;Dir=sensecoverage=100.0;identity=100.0;matches=432;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023411
Chr2	stalkie_big_nohaplotig	exon	160534859	160534899	100	+	.	Parent=FBgn0011695.1.mrna1;Target=FBgn0011695.1 1 41 +
Chr2	stalkie_big_nohaplotig	exon	160535077	160535467	100	+	.	Parent=FBgn0011695.1.mrna1;Target=FBgn0011695.1 42 432 +
Chr2	stalkie_big_nohaplotig	CDS	160534859	160534899	.	+	0	Parent=FBgn0011695.1.mrna1;Target=FBgn0011695.1 1 41 +
Chr2	stalkie_big_nohaplotig	CDS	160535077	160535467	.	+	1	Parent=FBgn0011695.1.mrna1;Target=FBgn0011695.1 42 432 +
Chr2	gffcl	locus	160541510	160543273	.	+	.	ID=RLOC_00023412;geneIDs=FBgn0013764.1.path1;transcripts=FBgn0013764.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160541510	160543273	.	+	.	ID=FBgn0013764.1.mrna1;geneID=FBgn0013764.1.path1;Name=FBgn0013764.1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1761;mismatches=3;indels=0;unknowns=0;Target=FBgn0013764.1 1764 1 .;locus=RLOC_00023412
Chr2	stalkie_big_nohaplotig	exon	160541510	160543273	99	+	.	Parent=FBgn0013764.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	160541510	160543273	.	+	0	Parent=FBgn0013764.1.mrna1
Chr2	gffcl	locus	160545702	160547013	.	+	.	ID=RLOC_00023413;geneIDs=FBgn0061198.1.path1;transcripts=FBgn0061198.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160545702	160547013	.	+	.	ID=FBgn0061198.1.mrna1;geneID=FBgn0061198.1.path1;Name=FBgn0061198.1;Dir=sensecoverage=100.0;identity=99.6;matches=248;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023413
Chr2	stalkie_big_nohaplotig	exon	160545702	160545843	99	+	.	Parent=FBgn0061198.1.mrna1;Target=FBgn0061198.1 1 142 +
Chr2	stalkie_big_nohaplotig	exon	160546907	160547013	100	+	.	Parent=FBgn0061198.1.mrna1;Target=FBgn0061198.1 143 249 +
Chr2	stalkie_big_nohaplotig	CDS	160545702	160545843	.	+	0	Parent=FBgn0061198.1.mrna1;Target=FBgn0061198.1 1 142 +
Chr2	stalkie_big_nohaplotig	CDS	160546907	160547013	.	+	2	Parent=FBgn0061198.1.mrna1;Target=FBgn0061198.1 143 249 +
Chr2	gffcl	locus	160548349	160550204	.	-	.	ID=RLOC_00023414;geneIDs=FBgn0050172.1.path1;transcripts=FBgn0050172.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160548349	160550204	.	-	.	ID=FBgn0050172.1.mrna1;geneID=FBgn0050172.1.path1;Name=FBgn0050172.1;Dir=sensecoverage=100.0;identity=100.0;matches=474;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023414
Chr2	stalkie_big_nohaplotig	exon	160548349	160548491	100	-	.	Parent=FBgn0050172.1.mrna1;Target=FBgn0050172.1 332 474 +
Chr2	stalkie_big_nohaplotig	exon	160549874	160550204	100	-	.	Parent=FBgn0050172.1.mrna1;Target=FBgn0050172.1 1 331 +
Chr2	stalkie_big_nohaplotig	CDS	160548349	160548491	.	-	2	Parent=FBgn0050172.1.mrna1;Target=FBgn0050172.1 332 474 +
Chr2	stalkie_big_nohaplotig	CDS	160549874	160550204	.	-	0	Parent=FBgn0050172.1.mrna1;Target=FBgn0050172.1 1 331 +
Chr2	gffcl	locus	160553052	160554086	.	-	.	ID=RLOC_00023415;geneIDs=FBgn0034958.1.path1;transcripts=FBgn0034958.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160553052	160554086	.	-	.	ID=FBgn0034958.1.mrna1;geneID=FBgn0034958.1.path1;Name=FBgn0034958.1;Dir=sensecoverage=100.0;identity=100.0;matches=846;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023415
Chr2	stalkie_big_nohaplotig	exon	160553052	160553225	100	-	.	Parent=FBgn0034958.1.mrna1;Target=FBgn0034958.1 673 846 +
Chr2	stalkie_big_nohaplotig	exon	160553289	160553593	100	-	.	Parent=FBgn0034958.1.mrna1;Target=FBgn0034958.1 368 672 +
Chr2	stalkie_big_nohaplotig	exon	160553651	160553819	100	-	.	Parent=FBgn0034958.1.mrna1;Target=FBgn0034958.1 199 367 +
Chr2	stalkie_big_nohaplotig	exon	160553889	160554086	100	-	.	Parent=FBgn0034958.1.mrna1;Target=FBgn0034958.1 1 198 +
Chr2	stalkie_big_nohaplotig	CDS	160553052	160553225	.	-	0	Parent=FBgn0034958.1.mrna1;Target=FBgn0034958.1 673 846 +
Chr2	stalkie_big_nohaplotig	CDS	160553289	160553593	.	-	2	Parent=FBgn0034958.1.mrna1;Target=FBgn0034958.1 368 672 +
Chr2	stalkie_big_nohaplotig	CDS	160553651	160553819	.	-	0	Parent=FBgn0034958.1.mrna1;Target=FBgn0034958.1 199 367 +
Chr2	stalkie_big_nohaplotig	CDS	160553889	160554086	.	-	0	Parent=FBgn0034958.1.mrna1;Target=FBgn0034958.1 1 198 +
Chr2	gffcl	locus	160561063	160568812	.	+	.	ID=RLOC_00023416;geneIDs=FBgn0035091.1.path1;transcripts=FBgn0035091.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160561063	160568812	.	+	.	ID=FBgn0035091.1.mrna1;geneID=FBgn0035091.1.path1;Name=FBgn0035091.1;Dir=sensecoverage=100.0;identity=99.7;matches=1771;mismatches=5;indels=0;unknowns=0;locus=RLOC_00023416
Chr2	stalkie_big_nohaplotig	exon	160561063	160561090	100	+	.	Parent=FBgn0035091.1.mrna1;Target=FBgn0035091.1 1 28 +
Chr2	stalkie_big_nohaplotig	exon	160565022	160565273	100	+	.	Parent=FBgn0035091.1.mrna1;Target=FBgn0035091.1 29 280 +
Chr2	stalkie_big_nohaplotig	exon	160567073	160567164	97	+	.	Parent=FBgn0035091.1.mrna1;Target=FBgn0035091.1 281 372 +
Chr2	stalkie_big_nohaplotig	exon	160567213	160567440	99	+	.	Parent=FBgn0035091.1.mrna1;Target=FBgn0035091.1 373 600 +
Chr2	stalkie_big_nohaplotig	exon	160567502	160567771	100	+	.	Parent=FBgn0035091.1.mrna1;Target=FBgn0035091.1 601 870 +
Chr2	stalkie_big_nohaplotig	exon	160567833	160568424	99	+	.	Parent=FBgn0035091.1.mrna1;Target=FBgn0035091.1 871 1462 +
Chr2	stalkie_big_nohaplotig	exon	160568499	160568812	100	+	.	Parent=FBgn0035091.1.mrna1;Target=FBgn0035091.1 1463 1776 +
Chr2	stalkie_big_nohaplotig	CDS	160561063	160561090	.	+	0	Parent=FBgn0035091.1.mrna1;Target=FBgn0035091.1 1 28 +
Chr2	stalkie_big_nohaplotig	CDS	160565022	160565273	.	+	2	Parent=FBgn0035091.1.mrna1;Target=FBgn0035091.1 29 280 +
Chr2	stalkie_big_nohaplotig	CDS	160567073	160567164	.	+	2	Parent=FBgn0035091.1.mrna1;Target=FBgn0035091.1 281 372 +
Chr2	stalkie_big_nohaplotig	CDS	160567213	160567440	.	+	0	Parent=FBgn0035091.1.mrna1;Target=FBgn0035091.1 373 600 +
Chr2	stalkie_big_nohaplotig	CDS	160567502	160567771	.	+	0	Parent=FBgn0035091.1.mrna1;Target=FBgn0035091.1 601 870 +
Chr2	stalkie_big_nohaplotig	CDS	160567833	160568424	.	+	0	Parent=FBgn0035091.1.mrna1;Target=FBgn0035091.1 871 1462 +
Chr2	stalkie_big_nohaplotig	CDS	160568499	160568812	.	+	2	Parent=FBgn0035091.1.mrna1;Target=FBgn0035091.1 1463 1776 +
Chr2	gffcl	locus	160561373	160562264	.	-	.	ID=RLOC_00023417;geneIDs=comp145759_c0_seq1.path1;transcripts=comp145759_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160561373	160562264	.	-	.	ID=comp145759_c0_seq1.mrna1;geneID=comp145759_c0_seq1.path1;Name=comp145759_c0_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=892;mismatches=0;indels=0;unknowns=0;Target=comp145759_c0_seq1 892 1 .;CDS_Target=comp145759_c0_seq1 223 110 .;locus=RLOC_00023417
Chr2	stalkie_big_nohaplotig	exon	160561373	160562264	100	-	.	Parent=comp145759_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	160562042	160562155	.	-	0	Parent=comp145759_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160569957	160570345	.	-	.	ID=comp69954_c0_seq1.mrna1;geneID=comp69954_c0_seq1.path1;Name=comp69954_c0_seq1;Dir=indeterminatecoverage=87.6;identity=98.5;matches=383;mismatches=6;indels=0;unknowns=0;Target=comp69954_c0_seq1 389 1 .;CDS_Target=comp69954_c0_seq1 179 93 .;locus=RLOC_00023418
Chr2	stalkie_big_nohaplotig	exon	160569957	160570345	98	-	.	Parent=comp69954_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	160570167	160570253	.	-	0	Parent=comp69954_c0_seq1.mrna1
Chr2	gffcl	locus	160569275	160572853	.	-	.	ID=RLOC_00023419;geneIDs=FBgn0022160.1.path1;transcripts=FBgn0022160.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160569275	160572853	.	-	.	ID=FBgn0022160.1.mrna1;geneID=FBgn0022160.1.path1;Name=FBgn0022160.1;Dir=sensecoverage=100.0;identity=99.5;matches=2173;mismatches=11;indels=0;unknowns=0;locus=RLOC_00023419
Chr2	stalkie_big_nohaplotig	exon	160569275	160569406	100	-	.	Parent=FBgn0022160.1.mrna1;Target=FBgn0022160.1 2053 2184 +
Chr2	stalkie_big_nohaplotig	exon	160569471	160569572	100	-	.	Parent=FBgn0022160.1.mrna1;Target=FBgn0022160.1 1951 2052 +
Chr2	stalkie_big_nohaplotig	exon	160569659	160569847	100	-	.	Parent=FBgn0022160.1.mrna1;Target=FBgn0022160.1 1762 1950 +
Chr2	stalkie_big_nohaplotig	exon	160570694	160571106	99	-	.	Parent=FBgn0022160.1.mrna1;Target=FBgn0022160.1 1349 1761 +
Chr2	stalkie_big_nohaplotig	exon	160571179	160571874	99	-	.	Parent=FBgn0022160.1.mrna1;Target=FBgn0022160.1 653 1348 +
Chr2	stalkie_big_nohaplotig	exon	160571934	160572097	100	-	.	Parent=FBgn0022160.1.mrna1;Target=FBgn0022160.1 489 652 +
Chr2	stalkie_big_nohaplotig	exon	160572156	160572268	99	-	.	Parent=FBgn0022160.1.mrna1;Target=FBgn0022160.1 376 488 +
Chr2	stalkie_big_nohaplotig	exon	160572407	160572673	98	-	.	Parent=FBgn0022160.1.mrna1;Target=FBgn0022160.1 109 375 +
Chr2	stalkie_big_nohaplotig	exon	160572746	160572853	100	-	.	Parent=FBgn0022160.1.mrna1;Target=FBgn0022160.1 1 108 +
Chr2	stalkie_big_nohaplotig	CDS	160569275	160569406	.	-	0	Parent=FBgn0022160.1.mrna1;Target=FBgn0022160.1 2053 2184 +
Chr2	stalkie_big_nohaplotig	CDS	160569471	160569572	.	-	0	Parent=FBgn0022160.1.mrna1;Target=FBgn0022160.1 1951 2052 +
Chr2	stalkie_big_nohaplotig	CDS	160569659	160569847	.	-	0	Parent=FBgn0022160.1.mrna1;Target=FBgn0022160.1 1762 1950 +
Chr2	stalkie_big_nohaplotig	CDS	160570694	160571106	.	-	2	Parent=FBgn0022160.1.mrna1;Target=FBgn0022160.1 1349 1761 +
Chr2	stalkie_big_nohaplotig	CDS	160571179	160571874	.	-	2	Parent=FBgn0022160.1.mrna1;Target=FBgn0022160.1 653 1348 +
Chr2	stalkie_big_nohaplotig	CDS	160571934	160572097	.	-	1	Parent=FBgn0022160.1.mrna1;Target=FBgn0022160.1 489 652 +
Chr2	stalkie_big_nohaplotig	CDS	160572156	160572268	.	-	0	Parent=FBgn0022160.1.mrna1;Target=FBgn0022160.1 376 488 +
Chr2	stalkie_big_nohaplotig	CDS	160572407	160572673	.	-	0	Parent=FBgn0022160.1.mrna1;Target=FBgn0022160.1 109 375 +
Chr2	stalkie_big_nohaplotig	CDS	160572746	160572853	.	-	0	Parent=FBgn0022160.1.mrna1;Target=FBgn0022160.1 1 108 +
Chr2	gffcl	locus	160573313	160573994	.	-	.	ID=RLOC_00023420;geneIDs=comp152791_c0_seq1.path1;transcripts=comp152791_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160573313	160573994	.	-	.	ID=comp152791_c0_seq1.mrna1;geneID=comp152791_c0_seq1.path1;Name=comp152791_c0_seq1;Dir=indeterminatecoverage=99.9;identity=99.4;matches=678;mismatches=4;indels=0;unknowns=0;Target=comp152791_c0_seq1 682 1 .;CDS_Target=comp152791_c0_seq1 108 1 .;locus=RLOC_00023420
Chr2	stalkie_big_nohaplotig	exon	160573313	160573994	99	-	.	Parent=comp152791_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	160573887	160573994	.	-	0	Parent=comp152791_c0_seq1.mrna1
Chr2	gffcl	locus	160582347	160583381	.	+	.	ID=RLOC_00023421;geneIDs=FBgn0034958.1.path2;transcripts=FBgn0034958.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	160582347	160583381	.	+	.	ID=FBgn0034958.1.mrna2;geneID=FBgn0034958.1.path2;Name=FBgn0034958.1;Dir=sensecoverage=100.0;identity=100.0;matches=846;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023421
Chr2	stalkie_big_nohaplotig	exon	160582347	160582544	100	+	.	Parent=FBgn0034958.1.mrna2;Target=FBgn0034958.1 1 198 +
Chr2	stalkie_big_nohaplotig	exon	160582614	160582782	100	+	.	Parent=FBgn0034958.1.mrna2;Target=FBgn0034958.1 199 367 +
Chr2	stalkie_big_nohaplotig	exon	160582840	160583144	100	+	.	Parent=FBgn0034958.1.mrna2;Target=FBgn0034958.1 368 672 +
Chr2	stalkie_big_nohaplotig	exon	160583208	160583381	100	+	.	Parent=FBgn0034958.1.mrna2;Target=FBgn0034958.1 673 846 +
Chr2	stalkie_big_nohaplotig	CDS	160582347	160582544	.	+	0	Parent=FBgn0034958.1.mrna2;Target=FBgn0034958.1 1 198 +
Chr2	stalkie_big_nohaplotig	CDS	160582614	160582782	.	+	0	Parent=FBgn0034958.1.mrna2;Target=FBgn0034958.1 199 367 +
Chr2	stalkie_big_nohaplotig	CDS	160582840	160583144	.	+	2	Parent=FBgn0034958.1.mrna2;Target=FBgn0034958.1 368 672 +
Chr2	stalkie_big_nohaplotig	CDS	160583208	160583381	.	+	0	Parent=FBgn0034958.1.mrna2;Target=FBgn0034958.1 673 846 +
Chr2	gffcl	locus	160605556	160606381	.	-	.	ID=RLOC_00023422;geneIDs=comp156656_c1_seq1.path1;transcripts=comp156656_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160605556	160606381	.	-	.	ID=comp156656_c1_seq1.mrna1;geneID=comp156656_c1_seq1.path1;Name=comp156656_c1_seq1;Dir=indeterminatecoverage=99.6;identity=97.2;matches=810;mismatches=9;indels=14;unknowns=0;Target=comp156656_c1_seq1 826 1 .;CDS_Target=comp156656_c1_seq1 354 250 .;locus=RLOC_00023422
Chr2	stalkie_big_nohaplotig	exon	160605556	160606381	97	-	.	Parent=comp156656_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	160606028	160606132	.	-	0	Parent=comp156656_c1_seq1.mrna1
Chr2	gffcl	locus	160607313	160608845	.	-	.	ID=RLOC_00023423;geneIDs=comp162918_c1_seq1.path1;transcripts=comp162918_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160607313	160608845	.	-	.	ID=comp162918_c1_seq1.mrna1;geneID=comp162918_c1_seq1.path1;Name=comp162918_c1_seq1;Dir=antisensecoverage=90.6;identity=97.7;matches=1335;mismatches=25;indels=6;unknowns=0;Target=comp162918_c1_seq1 1122 1217 .;locus=RLOC_00023423
Chr2	stalkie_big_nohaplotig	exon	160607313	160608579	98	-	.	Parent=comp162918_c1_seq1.mrna1;Target=comp162918_c1_seq1 1 1267 -
Chr2	stalkie_big_nohaplotig	exon	160608752	160608845	81	-	.	Parent=comp162918_c1_seq1.mrna1;Target=comp162918_c1_seq1 1268 1365 -
Chr2	stalkie_big_nohaplotig	CDS	160608434	160608529	.	-	0	Parent=comp162918_c1_seq1.mrna1
Chr2	gffcl	locus	160785125	160815340	.	+	.	ID=RLOC_00023424;geneIDs=FBgn0033108.1.path1;transcripts=FBgn0033108.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160785125	160815340	.	+	.	ID=FBgn0033108.1.mrna1;geneID=FBgn0033108.1.path1;Name=FBgn0033108.1;Dir=sensecoverage=99.9;identity=99.8;matches=1513;mismatches=3;indels=0;unknowns=0;locus=RLOC_00023424
Chr2	stalkie_big_nohaplotig	exon	160785125	160785680	99	+	.	Parent=FBgn0033108.1.mrna1;Target=FBgn0033108.1 3 558 +
Chr2	stalkie_big_nohaplotig	exon	160802454	160803249	99	+	.	Parent=FBgn0033108.1.mrna1;Target=FBgn0033108.1 559 1354 +
Chr2	stalkie_big_nohaplotig	exon	160815177	160815340	100	+	.	Parent=FBgn0033108.1.mrna1;Target=FBgn0033108.1 1355 1518 +
Chr2	stalkie_big_nohaplotig	CDS	160785126	160785680	.	+	0	Parent=FBgn0033108.1.mrna1;Target=FBgn0033108.1 4 558 +
Chr2	stalkie_big_nohaplotig	CDS	160802454	160803249	.	+	0	Parent=FBgn0033108.1.mrna1;Target=FBgn0033108.1 559 1354 +
Chr2	stalkie_big_nohaplotig	CDS	160815177	160815340	.	+	2	Parent=FBgn0033108.1.mrna1;Target=FBgn0033108.1 1355 1518 +
Chr2	gffcl	locus	160820180	160820594	.	+	.	ID=RLOC_00023425;geneIDs=comp151925_c0_seq1.path1;transcripts=comp151925_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160820180	160820594	.	+	.	ID=comp151925_c0_seq1.mrna1;geneID=comp151925_c0_seq1.path1;Name=comp151925_c0_seq1;Dir=indeterminatecoverage=90.2;identity=86.2;matches=350;mismatches=18;indels=38;unknowns=0;Target=comp151925_c0_seq1 272 216 .;locus=RLOC_00023425
Chr2	stalkie_big_nohaplotig	exon	160820180	160820282	93	+	.	Parent=comp151925_c0_seq1.mrna1;Target=comp151925_c0_seq1 139 44 .
Chr2	stalkie_big_nohaplotig	exon	160820292	160820594	83	+	.	Parent=comp151925_c0_seq1.mrna1;Target=comp151925_c0_seq1 440 169 .
Chr2	stalkie_big_nohaplotig	CDS	160820370	160820426	.	+	0	Parent=comp151925_c0_seq1.mrna1
Chr2	gffcl	locus	160821353	160821895	.	-	.	ID=RLOC_00023426;geneIDs=comp150450_c0_seq1.path1;transcripts=comp150450_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160821353	160821895	.	-	.	ID=comp150450_c0_seq1.mrna1;geneID=comp150450_c0_seq1.path1;Name=comp150450_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=537;mismatches=5;indels=1;unknowns=0;Target=comp150450_c0_seq1 542 1 .;CDS_Target=comp150450_c0_seq1 279 211 .;locus=RLOC_00023426
Chr2	stalkie_big_nohaplotig	exon	160821353	160821895	98	-	.	Parent=comp150450_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	160821616	160821685	.	-	0	Parent=comp150450_c0_seq1.mrna1
Chr2	gffcl	locus	160946837	160948643	.	-	.	ID=RLOC_00023427;geneIDs=comp158656_c0_seq1.path1;transcripts=comp158656_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160946837	160948643	.	-	.	ID=comp158656_c0_seq1.mrna1;geneID=comp158656_c0_seq1.path1;Name=comp158656_c0_seq1;Dir=sensecoverage=86.2;identity=87.0;matches=557;mismatches=21;indels=62;unknowns=0;Target=comp158656_c0_seq1 289 319 +;locus=RLOC_00023427
Chr2	stalkie_big_nohaplotig	exon	160946837	160947070	91	-	.	Parent=comp158656_c0_seq1.mrna1;Target=comp158656_c0_seq1 544 789 +
Chr2	stalkie_big_nohaplotig	exon	160947130	160947199	98	-	.	Parent=comp158656_c0_seq1.mrna1;Target=comp158656_c0_seq1 474 543 +
Chr2	stalkie_big_nohaplotig	exon	160947206	160947213	100	-	.	Parent=comp158656_c0_seq1.mrna1;Target=comp158656_c0_seq1 366 373 +
Chr2	stalkie_big_nohaplotig	exon	160947972	160948059	51	-	.	Parent=comp158656_c0_seq1.mrna1;Target=comp158656_c0_seq1 275 319 +
Chr2	stalkie_big_nohaplotig	exon	160948416	160948643	92	-	.	Parent=comp158656_c0_seq1.mrna1;Target=comp158656_c0_seq1 54 274 +
Chr2	stalkie_big_nohaplotig	CDS	160947972	160948002	.	-	0	Parent=comp158656_c0_seq1.mrna1
Chr2	gffcl	locus	160951286	160952123	.	-	.	ID=RLOC_00023428;geneIDs=comp159932_c0_seq1.path1;transcripts=comp159932_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160951286	160952123	.	-	.	ID=comp159932_c0_seq1.mrna1;geneID=comp159932_c0_seq1.path1;Name=comp159932_c0_seq1;Dir=sensecoverage=100.0;identity=99.4;matches=772;mismatches=5;indels=0;unknowns=0;locus=RLOC_00023428
Chr2	stalkie_big_nohaplotig	exon	160951286	160951825	99	-	.	Parent=comp159932_c0_seq1.mrna1;Target=comp159932_c0_seq1 238 777 +
Chr2	stalkie_big_nohaplotig	exon	160951887	160952123	100	-	.	Parent=comp159932_c0_seq1.mrna1;Target=comp159932_c0_seq1 1 237 +
Chr2	stalkie_big_nohaplotig	CDS	160951287	160951825	.	-	2	Parent=comp159932_c0_seq1.mrna1;Target=comp159932_c0_seq1 238 776 +
Chr2	stalkie_big_nohaplotig	CDS	160951887	160951980	.	-	0	Parent=comp159932_c0_seq1.mrna1;Target=comp159932_c0_seq1 144 237 +
Chr2	gffcl	locus	160965732	160966097	.	+	.	ID=RLOC_00023429;geneIDs=comp667848_c0_seq1.path1;transcripts=comp667848_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160965732	160966097	.	+	.	ID=comp667848_c0_seq1.mrna1;geneID=comp667848_c0_seq1.path1;Name=comp667848_c0_seq1;Dir=indeterminatecoverage=93.8;identity=95.4;matches=349;mismatches=17;indels=0;unknowns=0;Target=comp667848_c0_seq1 390 25 .;CDS_Target=comp667848_c0_seq1 191 60 .;locus=RLOC_00023429
Chr2	stalkie_big_nohaplotig	exon	160965732	160966097	95	+	.	Parent=comp667848_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	160965767	160965898	.	+	0	Parent=comp667848_c0_seq1.mrna1
Chr2	gffcl	locus	160971763	160972971	.	-	.	ID=RLOC_00023430;geneIDs=comp160319_c0_seq1.path1;transcripts=comp160319_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160971763	160972971	.	-	.	ID=comp160319_c0_seq1.mrna1;geneID=comp160319_c0_seq1.path1;Name=comp160319_c0_seq1;Dir=indeterminatecoverage=100.0;identity=95.9;matches=1187;mismatches=22;indels=29;unknowns=0;Target=comp160319_c0_seq1 1238 1 .;CDS_Target=comp160319_c0_seq1 991 893 .;locus=RLOC_00023430
Chr2	stalkie_big_nohaplotig	exon	160971763	160972971	95	-	.	Parent=comp160319_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	160972010	160972108	.	-	0	Parent=comp160319_c0_seq1.mrna1
Chr2	gffcl	locus	160973338	161013206	.	-	.	ID=RLOC_00023431;geneIDs=FBgn0003326.1.path1;transcripts=FBgn0003326.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	160973338	161013206	.	-	.	ID=FBgn0003326.1.mrna1;geneID=FBgn0003326.1.path1;Name=FBgn0003326.1;Dir=sensecoverage=98.2;identity=97.6;matches=2234;mismatches=26;indels=30;unknowns=0;locus=RLOC_00023431
Chr2	stalkie_big_nohaplotig	exon	160973338	160974225	100	-	.	Parent=FBgn0003326.1.mrna1;Target=FBgn0003326.1 1711 2598 +
Chr2	stalkie_big_nohaplotig	exon	160976619	160977175	99	-	.	Parent=FBgn0003326.1.mrna1;Target=FBgn0003326.1 1154 1710 +
Chr2	stalkie_big_nohaplotig	exon	160979722	160979729	100	-	.	Parent=FBgn0003326.1.mrna1;Target=FBgn0003326.1 1055 1062 +
Chr2	stalkie_big_nohaplotig	exon	160984063	160984073	91	-	.	Parent=FBgn0003326.1.mrna1;Target=FBgn0003326.1 1022 1033 +
Chr2	stalkie_big_nohaplotig	exon	160989082	160989110	44	-	.	Parent=FBgn0003326.1.mrna1;Target=FBgn0003326.1 1003 1021 +
Chr2	stalkie_big_nohaplotig	exon	160996377	160996385	100	-	.	Parent=FBgn0003326.1.mrna1;Target=FBgn0003326.1 929 937 +
Chr2	stalkie_big_nohaplotig	exon	160999346	160999414	54	-	.	Parent=FBgn0003326.1.mrna1;Target=FBgn0003326.1 786 845 +
Chr2	stalkie_big_nohaplotig	exon	161012496	161013206	99	-	.	Parent=FBgn0003326.1.mrna1;Target=FBgn0003326.1 48 758 +
Chr2	stalkie_big_nohaplotig	CDS	160973338	160974225	.	-	0	Parent=FBgn0003326.1.mrna1;Target=FBgn0003326.1 1711 2598 +
Chr2	stalkie_big_nohaplotig	CDS	160976619	160977083	.	-	0	Parent=FBgn0003326.1.mrna1;Target=FBgn0003326.1 1246 1710 +
Chr2	gffcl	locus	161015255	161019138	.	+	.	ID=RLOC_00023432;geneIDs=comp162399_c0_seq1.path1;transcripts=comp162399_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161015255	161019138	.	+	.	ID=comp162399_c0_seq1.mrna1;geneID=comp162399_c0_seq1.path1;Name=comp162399_c0_seq1;Dir=antisensecoverage=100.0;identity=96.3;matches=2229;mismatches=72;indels=14;unknowns=0;Target=comp162399_c0_seq1 923 940 .;locus=RLOC_00023432
Chr2	stalkie_big_nohaplotig	exon	161015255	161016300	98	+	.	Parent=comp162399_c0_seq1.mrna1;Target=comp162399_c0_seq1 1266 2314 -
Chr2	stalkie_big_nohaplotig	exon	161016361	161016983	95	+	.	Parent=comp162399_c0_seq1.mrna1;Target=comp162399_c0_seq1 643 1265 -
Chr2	stalkie_big_nohaplotig	exon	161017058	161017413	92	+	.	Parent=comp162399_c0_seq1.mrna1;Target=comp162399_c0_seq1 287 642 -
Chr2	stalkie_big_nohaplotig	exon	161018862	161019138	93	+	.	Parent=comp162399_c0_seq1.mrna1;Target=comp162399_c0_seq1 1 286 -
Chr2	stalkie_big_nohaplotig	CDS	161016685	161016702	.	+	0	Parent=comp162399_c0_seq1.mrna1
Chr2	gffcl	locus	161042135	161047281	.	-	.	ID=RLOC_00023433;geneIDs=comp156514_c0_seq1.path1,comp157084_c0_seq1.path1,comp163835_c0_seq1.path1;transcripts=comp163835_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161042811	161046538	.	-	.	ID=comp163835_c0_seq1.mrna1;geneID=comp163835_c0_seq1.path1;Name=comp163835_c0_seq1;Dir=antisensecoverage=99.5;identity=94.8;matches=3474;mismatches=172;indels=20;unknowns=0;Target=comp163835_c0_seq1 3206 3364 .;locus=RLOC_00023433
Chr2	stalkie_big_nohaplotig	exon	161042811	161043500	95	-	.	Parent=comp163835_c0_seq1.mrna1;Target=comp163835_c0_seq1 21 710 -
Chr2	stalkie_big_nohaplotig	exon	161043562	161045824	94	-	.	Parent=comp163835_c0_seq1.mrna1;Target=comp163835_c0_seq1 711 2982 -
Chr2	stalkie_big_nohaplotig	exon	161045845	161046538	95	-	.	Parent=comp163835_c0_seq1.mrna1;Target=comp163835_c0_seq1 3154 3856 -
Chr2	stalkie_big_nohaplotig	CDS	161045891	161046049	.	-	0	Parent=comp163835_c0_seq1.mrna1
Chr2	gffcl	locus	161071111	161071823	.	-	.	ID=RLOC_00023434;geneIDs=comp157215_c0_seq1.path2;transcripts=comp157215_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	161071111	161071823	.	-	.	ID=comp157215_c0_seq1.mrna2;geneID=comp157215_c0_seq1.path2;Name=comp157215_c0_seq1;Dir=indeterminatecoverage=99.7;identity=96.1;matches=688;mismatches=22;indels=6;unknowns=0;Target=comp157215_c0_seq1 713 1 .;CDS_Target=comp157215_c0_seq1 713 630 .;locus=RLOC_00023434
Chr2	stalkie_big_nohaplotig	exon	161071111	161071823	96	-	.	Parent=comp157215_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	161071111	161071197	.	-	0	Parent=comp157215_c0_seq1.mrna2
Chr2	gffcl	locus	161071861	161072237	.	-	.	ID=RLOC_00023435;geneIDs=comp144039_c0_seq1.path2;transcripts=comp144039_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	161071861	161072237	.	-	.	ID=comp144039_c0_seq1.mrna2;geneID=comp144039_c0_seq1.path2;Name=comp144039_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=372;mismatches=5;indels=2;unknowns=0;Target=comp144039_c0_seq1 379 1 .;CDS_Target=comp144039_c0_seq1 55 2 .;locus=RLOC_00023435
Chr2	stalkie_big_nohaplotig	exon	161071861	161072237	98	-	.	Parent=comp144039_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	161072183	161072236	.	-	0	Parent=comp144039_c0_seq1.mrna2
Chr2	gffcl	locus	161104733	161483302	.	-	.	ID=RLOC_00023436;geneIDs=Dp_FBgn0243606.path5,comp163367_c4_seq1.path5;transcripts=Dp_FBgn0243606.mrna5
Chr2	stalkie_big_nohaplotig	mRNA	161104733	161483302	.	-	.	ID=Dp_FBgn0243606.mrna5;geneID=Dp_FBgn0243606.path5;Name=Dp_FBgn0243606;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1230;mismatches=16;indels=0;unknowns=5;locus=RLOC_00023436
Chr2	stalkie_big_nohaplotig	exon	161104733	161105576	97	-	.	Parent=Dp_FBgn0243606.mrna5;Target=Dp_FBgn0243606 844 1 .
Chr2	stalkie_big_nohaplotig	exon	161482052	161483302	98	-	.	Parent=Dp_FBgn0243606.mrna5;Target=Dp_FBgn0243606 1251 1 .
Chr2	stalkie_big_nohaplotig	CDS	161104734	161105576	.	-	0	Parent=Dp_FBgn0243606.mrna5;Target=Dp_FBgn0243606 843 1 .
Chr2	stalkie_big_nohaplotig	CDS	161482052	161483302	.	-	0	Parent=Dp_FBgn0243606.mrna5;Target=Dp_FBgn0243606 1251 1 .
Chr2	gffcl	locus	161193525	161193853	.	-	.	ID=RLOC_00023438;geneIDs=comp74442_c0_seq1.path1;transcripts=comp74442_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161193525	161193853	.	-	.	ID=comp74442_c0_seq1.mrna1;geneID=comp74442_c0_seq1.path1;Name=comp74442_c0_seq1;Dir=indeterminatecoverage=92.4;identity=100.0;matches=329;mismatches=0;indels=0;unknowns=0;Target=comp74442_c0_seq1 356 28 .;CDS_Target=comp74442_c0_seq1 103 29 .;locus=RLOC_00023438
Chr2	stalkie_big_nohaplotig	exon	161193525	161193853	100	-	.	Parent=comp74442_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	161193778	161193852	.	-	0	Parent=comp74442_c0_seq1.mrna1
Chr2	gffcl	locus	161216441	161217084	.	+	.	ID=RLOC_00023439;geneIDs=comp150931_c0_seq1.path1;transcripts=comp150931_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161216441	161217084	.	+	.	ID=comp150931_c0_seq1.mrna1;geneID=comp150931_c0_seq1.path1;Name=comp150931_c0_seq1;Dir=sensecoverage=99.8;identity=94.9;matches=481;mismatches=26;indels=0;unknowns=0;locus=RLOC_00023439
Chr2	stalkie_big_nohaplotig	exon	161216441	161216649	96	+	.	Parent=comp150931_c0_seq1.mrna1;Target=comp150931_c0_seq1 1 209 +
Chr2	stalkie_big_nohaplotig	exon	161216718	161216745	96	+	.	Parent=comp150931_c0_seq1.mrna1;Target=comp150931_c0_seq1 210 237 +
Chr2	stalkie_big_nohaplotig	exon	161216815	161217084	93	+	.	Parent=comp150931_c0_seq1.mrna1;Target=comp150931_c0_seq1 238 507 +
Chr2	stalkie_big_nohaplotig	CDS	161216557	161216649	.	+	0	Parent=comp150931_c0_seq1.mrna1;Target=comp150931_c0_seq1 117 209 +
Chr2	stalkie_big_nohaplotig	CDS	161216718	161216745	.	+	0	Parent=comp150931_c0_seq1.mrna1;Target=comp150931_c0_seq1 210 237 +
Chr2	stalkie_big_nohaplotig	CDS	161216815	161216969	.	+	2	Parent=comp150931_c0_seq1.mrna1;Target=comp150931_c0_seq1 238 392 +
Chr2	gffcl	locus	161243610	161244329	.	-	.	ID=RLOC_00023440;geneIDs=comp116264_c0_seq1.path1;transcripts=comp116264_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161243610	161244329	.	-	.	ID=comp116264_c0_seq1.mrna1;geneID=comp116264_c0_seq1.path1;Name=comp116264_c0_seq1;Dir=sensecoverage=100.0;identity=97.9;matches=650;mismatches=11;indels=3;unknowns=0;Target=comp116264_c0_seq1 3 71 +;locus=RLOC_00023440
Chr2	stalkie_big_nohaplotig	exon	161243610	161244118	98	-	.	Parent=comp116264_c0_seq1.mrna1;Target=comp116264_c0_seq1 153 662 +
Chr2	stalkie_big_nohaplotig	exon	161244176	161244329	96	-	.	Parent=comp116264_c0_seq1.mrna1;Target=comp116264_c0_seq1 1 152 +
Chr2	stalkie_big_nohaplotig	CDS	161244257	161244327	.	-	0	Parent=comp116264_c0_seq1.mrna1
Chr2	gffcl	locus	161293717	161294453	.	-	.	ID=RLOC_00023441;geneIDs=comp146226_c1_seq1.path1;transcripts=comp146226_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161293717	161294453	.	-	.	ID=comp146226_c1_seq1.mrna1;geneID=comp146226_c1_seq1.path1;Name=comp146226_c1_seq1;Dir=indeterminatecoverage=96.3;identity=99.3;matches=733;mismatches=4;indels=1;unknowns=0;Target=comp146226_c1_seq1 766 29 .;CDS_Target=comp146226_c1_seq1 764 657 .;locus=RLOC_00023441
Chr2	stalkie_big_nohaplotig	exon	161293717	161294453	99	-	.	Parent=comp146226_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	161293719	161293826	.	-	0	Parent=comp146226_c1_seq1.mrna1
Chr2	gffcl	locus	161301911	161302051	.	+	.	ID=RLOC_00023442;geneIDs=comp52111_c0_seq1.path2;transcripts=comp52111_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	161301911	161302051	.	+	.	ID=comp52111_c0_seq1.mrna2;geneID=comp52111_c0_seq1.path2;Name=comp52111_c0_seq1;Dir=indeterminatecoverage=33.9;identity=99.3;matches=140;mismatches=1;indels=0;unknowns=0;Target=comp52111_c0_seq1 392 252 .;locus=RLOC_00023442
Chr2	stalkie_big_nohaplotig	exon	161301911	161302051	99	+	.	Parent=comp52111_c0_seq1.mrna2
Chr2	gffcl	locus	161320250	161329649	.	+	.	ID=RLOC_00023443;geneIDs=FBgn0033110.1.path1;transcripts=FBgn0033110.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161320250	161329649	.	+	.	ID=FBgn0033110.1.mrna1;geneID=FBgn0033110.1.path1;Name=FBgn0033110.1;Dir=sensecoverage=100.0;identity=99.8;matches=2027;mismatches=4;indels=0;unknowns=0;locus=RLOC_00023443
Chr2	stalkie_big_nohaplotig	exon	161320250	161320346	100	+	.	Parent=FBgn0033110.1.mrna1;Target=FBgn0033110.1 1 97 +
Chr2	stalkie_big_nohaplotig	exon	161322673	161322944	99	+	.	Parent=FBgn0033110.1.mrna1;Target=FBgn0033110.1 98 369 +
Chr2	stalkie_big_nohaplotig	exon	161323008	161323179	100	+	.	Parent=FBgn0033110.1.mrna1;Target=FBgn0033110.1 370 541 +
Chr2	stalkie_big_nohaplotig	exon	161324239	161324385	100	+	.	Parent=FBgn0033110.1.mrna1;Target=FBgn0033110.1 542 688 +
Chr2	stalkie_big_nohaplotig	exon	161324456	161324834	100	+	.	Parent=FBgn0033110.1.mrna1;Target=FBgn0033110.1 689 1067 +
Chr2	stalkie_big_nohaplotig	exon	161327126	161327291	100	+	.	Parent=FBgn0033110.1.mrna1;Target=FBgn0033110.1 1068 1233 +
Chr2	stalkie_big_nohaplotig	exon	161327340	161327419	100	+	.	Parent=FBgn0033110.1.mrna1;Target=FBgn0033110.1 1234 1313 +
Chr2	stalkie_big_nohaplotig	exon	161327487	161327600	99	+	.	Parent=FBgn0033110.1.mrna1;Target=FBgn0033110.1 1314 1427 +
Chr2	stalkie_big_nohaplotig	exon	161328876	161329228	99	+	.	Parent=FBgn0033110.1.mrna1;Target=FBgn0033110.1 1428 1780 +
Chr2	stalkie_big_nohaplotig	exon	161329341	161329483	100	+	.	Parent=FBgn0033110.1.mrna1;Target=FBgn0033110.1 1781 1923 +
Chr2	stalkie_big_nohaplotig	exon	161329542	161329649	100	+	.	Parent=FBgn0033110.1.mrna1;Target=FBgn0033110.1 1924 2031 +
Chr2	stalkie_big_nohaplotig	CDS	161320250	161320346	.	+	0	Parent=FBgn0033110.1.mrna1;Target=FBgn0033110.1 1 97 +
Chr2	stalkie_big_nohaplotig	CDS	161322673	161322944	.	+	2	Parent=FBgn0033110.1.mrna1;Target=FBgn0033110.1 98 369 +
Chr2	stalkie_big_nohaplotig	CDS	161323008	161323179	.	+	0	Parent=FBgn0033110.1.mrna1;Target=FBgn0033110.1 370 541 +
Chr2	stalkie_big_nohaplotig	CDS	161324239	161324385	.	+	2	Parent=FBgn0033110.1.mrna1;Target=FBgn0033110.1 542 688 +
Chr2	stalkie_big_nohaplotig	CDS	161324456	161324834	.	+	2	Parent=FBgn0033110.1.mrna1;Target=FBgn0033110.1 689 1067 +
Chr2	stalkie_big_nohaplotig	CDS	161327126	161327291	.	+	1	Parent=FBgn0033110.1.mrna1;Target=FBgn0033110.1 1068 1233 +
Chr2	stalkie_big_nohaplotig	CDS	161327340	161327419	.	+	0	Parent=FBgn0033110.1.mrna1;Target=FBgn0033110.1 1234 1313 +
Chr2	stalkie_big_nohaplotig	CDS	161327487	161327600	.	+	1	Parent=FBgn0033110.1.mrna1;Target=FBgn0033110.1 1314 1427 +
Chr2	stalkie_big_nohaplotig	CDS	161328876	161329228	.	+	1	Parent=FBgn0033110.1.mrna1;Target=FBgn0033110.1 1428 1780 +
Chr2	stalkie_big_nohaplotig	CDS	161329341	161329483	.	+	2	Parent=FBgn0033110.1.mrna1;Target=FBgn0033110.1 1781 1923 +
Chr2	stalkie_big_nohaplotig	CDS	161329542	161329649	.	+	0	Parent=FBgn0033110.1.mrna1;Target=FBgn0033110.1 1924 2031 +
Chr2	gffcl	locus	161332388	161337716	.	+	.	ID=RLOC_00023444;geneIDs=FBgn0033906.1.path1;transcripts=FBgn0033906.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161332388	161337716	.	+	.	ID=FBgn0033906.1.mrna1;geneID=FBgn0033906.1.path1;Name=FBgn0033906.1;Dir=sensecoverage=100.0;identity=99.6;matches=562;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023444
Chr2	stalkie_big_nohaplotig	exon	161332388	161332547	100	+	.	Parent=FBgn0033906.1.mrna1;Target=FBgn0033906.1 1 160 +
Chr2	stalkie_big_nohaplotig	exon	161337185	161337417	99	+	.	Parent=FBgn0033906.1.mrna1;Target=FBgn0033906.1 161 393 +
Chr2	stalkie_big_nohaplotig	exon	161337476	161337575	100	+	.	Parent=FBgn0033906.1.mrna1;Target=FBgn0033906.1 394 493 +
Chr2	stalkie_big_nohaplotig	exon	161337646	161337716	98	+	.	Parent=FBgn0033906.1.mrna1;Target=FBgn0033906.1 494 564 +
Chr2	stalkie_big_nohaplotig	CDS	161332388	161332547	.	+	0	Parent=FBgn0033906.1.mrna1;Target=FBgn0033906.1 1 160 +
Chr2	stalkie_big_nohaplotig	CDS	161337185	161337417	.	+	2	Parent=FBgn0033906.1.mrna1;Target=FBgn0033906.1 161 393 +
Chr2	stalkie_big_nohaplotig	CDS	161337476	161337575	.	+	0	Parent=FBgn0033906.1.mrna1;Target=FBgn0033906.1 394 493 +
Chr2	stalkie_big_nohaplotig	CDS	161337646	161337716	.	+	2	Parent=FBgn0033906.1.mrna1;Target=FBgn0033906.1 494 564 +
Chr2	gffcl	locus	161338545	161339039	.	-	.	ID=RLOC_00023445;geneIDs=FBgn0033907.1.path1;transcripts=FBgn0033907.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161338545	161339039	.	-	.	ID=FBgn0033907.1.mrna1;geneID=FBgn0033907.1.path1;Name=FBgn0033907.1;Dir=sensecoverage=100.0;identity=99.8;matches=437;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023445
Chr2	stalkie_big_nohaplotig	exon	161338545	161338841	99	-	.	Parent=FBgn0033907.1.mrna1;Target=FBgn0033907.1 142 438 +
Chr2	stalkie_big_nohaplotig	exon	161338899	161339039	100	-	.	Parent=FBgn0033907.1.mrna1;Target=FBgn0033907.1 1 141 +
Chr2	stalkie_big_nohaplotig	CDS	161338545	161338841	.	-	0	Parent=FBgn0033907.1.mrna1;Target=FBgn0033907.1 142 438 +
Chr2	stalkie_big_nohaplotig	CDS	161338899	161339039	.	-	0	Parent=FBgn0033907.1.mrna1;Target=FBgn0033907.1 1 141 +
Chr2	gffcl	locus	161353043	161353741	.	-	.	ID=RLOC_00023446;geneIDs=comp78217_c0_seq1.path1;transcripts=comp78217_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161353043	161353741	.	-	.	ID=comp78217_c0_seq1.mrna1;geneID=comp78217_c0_seq1.path1;Name=comp78217_c0_seq1;Dir=indeterminatecoverage=85.3;identity=99.7;matches=697;mismatches=2;indels=0;unknowns=0;Target=comp78217_c0_seq1 720 22 .;CDS_Target=comp78217_c0_seq1 720 477 .;locus=RLOC_00023446
Chr2	stalkie_big_nohaplotig	exon	161353043	161353741	99	-	.	Parent=comp78217_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	161353043	161353286	.	-	0	Parent=comp78217_c0_seq1.mrna1
Chr2	gffcl	locus	161438497	161441178	.	-	.	ID=RLOC_00023447;geneIDs=FBgn0040780.1.path2;transcripts=FBgn0040780.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	161438497	161441178	.	-	.	ID=FBgn0040780.1.mrna2;geneID=FBgn0040780.1.path2;Name=FBgn0040780.1;Dir=sensecoverage=100.0;identity=94.4;matches=714;mismatches=9;indels=33;unknowns=0;locus=RLOC_00023447
Chr2	stalkie_big_nohaplotig	exon	161438497	161438765	99	-	.	Parent=FBgn0040780.1.mrna2;Target=FBgn0040780.1 455 723 +
Chr2	stalkie_big_nohaplotig	exon	161438884	161439235	88	-	.	Parent=FBgn0040780.1.mrna2;Target=FBgn0040780.1 136 454 +
Chr2	stalkie_big_nohaplotig	exon	161441044	161441178	100	-	.	Parent=FBgn0040780.1.mrna2;Target=FBgn0040780.1 1 135 +
Chr2	stalkie_big_nohaplotig	CDS	161438497	161438765	.	-	2	Parent=FBgn0040780.1.mrna2;Target=FBgn0040780.1 455 723 +
Chr2	stalkie_big_nohaplotig	CDS	161438884	161439235	.	-	0	Parent=FBgn0040780.1.mrna2;Target=FBgn0040780.1 136 454 +
Chr2	stalkie_big_nohaplotig	CDS	161441044	161441178	.	-	0	Parent=FBgn0040780.1.mrna2;Target=FBgn0040780.1 1 135 +
Chr2	gffcl	locus	161445455	161447230	.	+	.	ID=RLOC_00023448;geneIDs=FBgn0034537.1.path2;transcripts=FBgn0034537.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	161445455	161447230	.	+	.	ID=FBgn0034537.1.mrna2;geneID=FBgn0034537.1.path2;Name=FBgn0034537.1;Dir=sensecoverage=100.0;identity=99.9;matches=1352;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023448
Chr2	stalkie_big_nohaplotig	exon	161445455	161445588	100	+	.	Parent=FBgn0034537.1.mrna2;Target=FBgn0034537.1 1 134 +
Chr2	stalkie_big_nohaplotig	exon	161445640	161445743	99	+	.	Parent=FBgn0034537.1.mrna2;Target=FBgn0034537.1 135 238 +
Chr2	stalkie_big_nohaplotig	exon	161445819	161446101	100	+	.	Parent=FBgn0034537.1.mrna2;Target=FBgn0034537.1 239 521 +
Chr2	stalkie_big_nohaplotig	exon	161446180	161446510	100	+	.	Parent=FBgn0034537.1.mrna2;Target=FBgn0034537.1 522 852 +
Chr2	stalkie_big_nohaplotig	exon	161446617	161446872	100	+	.	Parent=FBgn0034537.1.mrna2;Target=FBgn0034537.1 853 1108 +
Chr2	stalkie_big_nohaplotig	exon	161446932	161447086	100	+	.	Parent=FBgn0034537.1.mrna2;Target=FBgn0034537.1 1109 1263 +
Chr2	stalkie_big_nohaplotig	exon	161447141	161447230	100	+	.	Parent=FBgn0034537.1.mrna2;Target=FBgn0034537.1 1264 1353 +
Chr2	stalkie_big_nohaplotig	CDS	161445455	161445588	.	+	0	Parent=FBgn0034537.1.mrna2;Target=FBgn0034537.1 1 134 +
Chr2	stalkie_big_nohaplotig	CDS	161445640	161445743	.	+	1	Parent=FBgn0034537.1.mrna2;Target=FBgn0034537.1 135 238 +
Chr2	stalkie_big_nohaplotig	CDS	161445819	161446101	.	+	2	Parent=FBgn0034537.1.mrna2;Target=FBgn0034537.1 239 521 +
Chr2	stalkie_big_nohaplotig	CDS	161446180	161446510	.	+	1	Parent=FBgn0034537.1.mrna2;Target=FBgn0034537.1 522 852 +
Chr2	stalkie_big_nohaplotig	CDS	161446617	161446872	.	+	0	Parent=FBgn0034537.1.mrna2;Target=FBgn0034537.1 853 1108 +
Chr2	stalkie_big_nohaplotig	CDS	161446932	161447086	.	+	2	Parent=FBgn0034537.1.mrna2;Target=FBgn0034537.1 1109 1263 +
Chr2	stalkie_big_nohaplotig	CDS	161447141	161447230	.	+	0	Parent=FBgn0034537.1.mrna2;Target=FBgn0034537.1 1264 1353 +
Chr2	gffcl	locus	161527575	161532126	.	-	.	ID=RLOC_00023449;geneIDs=comp156926_c6_seq1.path1;transcripts=comp156926_c6_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161527575	161532126	.	-	.	ID=comp156926_c6_seq1.mrna1;geneID=comp156926_c6_seq1.path1;Name=comp156926_c6_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=4547;mismatches=5;indels=0;unknowns=0;Target=comp156926_c6_seq1 4552 1 .;CDS_Target=comp156926_c6_seq1 2238 1873 .;locus=RLOC_00023449
Chr2	stalkie_big_nohaplotig	exon	161527575	161532126	99	-	.	Parent=comp156926_c6_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	161529889	161530254	.	-	0	Parent=comp156926_c6_seq1.mrna1
Chr2	gffcl	locus	161566431	161566584	.	-	.	ID=RLOC_00023454;geneIDs=FBgn0013953.1.path1;transcripts=FBgn0013953.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161566431	161566584	.	-	.	ID=FBgn0013953.1.mrna1;geneID=FBgn0013953.1.path1;Name=FBgn0013953.1;Dir=indeterminatecoverage=7.8;identity=100.0;matches=154;mismatches=0;indels=0;unknowns=0;Target=FBgn0013953.1 154 1 .;locus=RLOC_00023454
Chr2	stalkie_big_nohaplotig	exon	161566431	161566584	100	-	.	Parent=FBgn0013953.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	161566431	161566584	.	-	0	Parent=FBgn0013953.1.mrna1
Chr2	gffcl	locus	161576180	161576546	.	-	.	ID=RLOC_00023455;geneIDs=comp51848_c0_seq1.path1;transcripts=comp51848_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161576180	161576546	.	-	.	ID=comp51848_c0_seq1.mrna1;geneID=comp51848_c0_seq1.path1;Name=comp51848_c0_seq1;Dir=indeterminatecoverage=97.4;identity=99.2;matches=365;mismatches=2;indels=1;unknowns=0;Target=comp51848_c0_seq1 368 1 .;CDS_Target=comp51848_c0_seq1 153 1 .;locus=RLOC_00023455
Chr2	stalkie_big_nohaplotig	exon	161576180	161576546	99	-	.	Parent=comp51848_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	161576394	161576546	.	-	0	Parent=comp51848_c0_seq1.mrna1
Chr2	gffcl	locus	161578897	161579291	.	-	.	ID=RLOC_00023456;geneIDs=comp137087_c0_seq1.path1;transcripts=comp137087_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161578897	161579291	.	-	.	ID=comp137087_c0_seq1.mrna1;geneID=comp137087_c0_seq1.path1;Name=comp137087_c0_seq1;Dir=indeterminatecoverage=93.2;identity=100.0;matches=395;mismatches=0;indels=0;unknowns=0;Target=comp137087_c0_seq1 400 6 .;CDS_Target=comp137087_c0_seq1 203 6 .;locus=RLOC_00023456
Chr2	stalkie_big_nohaplotig	exon	161578897	161579291	100	-	.	Parent=comp137087_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	161579094	161579291	.	-	0	Parent=comp137087_c0_seq1.mrna1
Chr2	gffcl	locus	161664852	161665150	.	-	.	ID=RLOC_00023457;geneIDs=FBgn0003944.1.path2;transcripts=FBgn0003944.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	161664852	161665150	.	-	.	ID=FBgn0003944.1.mrna2;geneID=FBgn0003944.1.path2;Name=FBgn0003944.1;Dir=indeterminatecoverage=38.5;identity=100.0;matches=299;mismatches=0;indels=0;unknowns=0;Target=FBgn0003944.1 777 479 .;locus=RLOC_00023457
Chr2	stalkie_big_nohaplotig	exon	161664852	161665150	100	-	.	Parent=FBgn0003944.1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	161664852	161665150	.	-	1	Parent=FBgn0003944.1.mrna2
Chr2	gffcl	locus	161798837	161801750	.	+	.	ID=RLOC_00023458;geneIDs=comp153197_c0_seq1.path1,comp163751_c1_seq1.path1;transcripts=comp153197_c0_seq1.mrna1,comp163751_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161798837	161800292	.	+	.	ID=comp153197_c0_seq1.mrna1;geneID=comp153197_c0_seq1.path1;Name=comp153197_c0_seq1;Dir=indeterminatecoverage=99.6;identity=99.0;matches=1447;mismatches=6;indels=9;unknowns=0;Target=comp153197_c0_seq1 1465 7 .;CDS_Target=comp153197_c0_seq1 295 194 .;locus=RLOC_00023458
Chr2	stalkie_big_nohaplotig	exon	161798837	161800292	98	+	.	Parent=comp153197_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	161799027	161799128	.	+	0	Parent=comp153197_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161798884	161801750	.	+	.	ID=comp163751_c1_seq1.mrna1;geneID=comp163751_c1_seq1.path1;Name=comp163751_c1_seq1;Dir=indeterminatecoverage=91.5;identity=97.0;matches=1384;mismatches=43;indels=0;unknowns=0;Target=comp163751_c1_seq1 1169 912 .;locus=RLOC_00023458
Chr2	stalkie_big_nohaplotig	exon	161798884	161798892	100	+	.	Parent=comp163751_c1_seq1.mrna1;Target=comp163751_c1_seq1 141 133 .
Chr2	stalkie_big_nohaplotig	exon	161800333	161801750	96	+	.	Parent=comp163751_c1_seq1.mrna1;Target=comp163751_c1_seq1 1562 145 .
Chr2	stalkie_big_nohaplotig	CDS	161801100	161801357	.	+	0	Parent=comp163751_c1_seq1.mrna1
Chr2	gffcl	locus	161802970	161803569	.	-	.	ID=RLOC_00023459;geneIDs=comp148174_c0_seq1.path1;transcripts=comp148174_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161802970	161803569	.	-	.	ID=comp148174_c0_seq1.mrna1;geneID=comp148174_c0_seq1.path1;Name=comp148174_c0_seq1;Dir=indeterminatecoverage=93.5;identity=99.3;matches=598;mismatches=1;indels=3;unknowns=0;Target=comp148174_c0_seq1 607 7 .;CDS_Target=comp148174_c0_seq1 143 9 .;locus=RLOC_00023459
Chr2	stalkie_big_nohaplotig	exon	161802970	161803569	99	-	.	Parent=comp148174_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	161803435	161803567	.	-	0	Parent=comp148174_c0_seq1.mrna1
Chr2	gffcl	locus	161804744	161805286	.	-	.	ID=RLOC_00023460;geneIDs=comp158072_c0_seq1.path1;transcripts=comp158072_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161804744	161805286	.	-	.	ID=comp158072_c0_seq1.mrna1;geneID=comp158072_c0_seq1.path1;Name=comp158072_c0_seq1;Dir=indeterminatecoverage=99.6;identity=98.7;matches=542;mismatches=1;indels=6;unknowns=0;Target=comp158072_c0_seq1 551 3 .;CDS_Target=comp158072_c0_seq1 328 176 .;locus=RLOC_00023460
Chr2	stalkie_big_nohaplotig	exon	161804744	161805286	98	-	.	Parent=comp158072_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	161804967	161805119	.	-	0	Parent=comp158072_c0_seq1.mrna1
Chr2	gffcl	locus	161805344	161828142	.	-	.	ID=RLOC_00023461;geneIDs=FBgn0085391.1.path2,comp95473_c0_seq1.path1;transcripts=comp95473_c0_seq1.mrna1,FBgn0085391.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	161805344	161813248	.	-	.	ID=comp95473_c0_seq1.mrna1;geneID=comp95473_c0_seq1.path1;Name=comp95473_c0_seq1;Dir=sensecoverage=100.0;identity=100.0;matches=572;mismatches=0;indels=0;unknowns=0;Target=comp95473_c0_seq1 333 494 +;locus=RLOC_00023461
Chr2	stalkie_big_nohaplotig	exon	161805344	161805891	100	-	.	Parent=comp95473_c0_seq1.mrna1;Target=comp95473_c0_seq1 25 572 +
Chr2	stalkie_big_nohaplotig	exon	161813225	161813248	100	-	.	Parent=comp95473_c0_seq1.mrna1;Target=comp95473_c0_seq1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	161805422	161805583	.	-	0	Parent=comp95473_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161813198	161828142	.	-	.	ID=FBgn0085391.1.mrna2;geneID=FBgn0085391.1.path2;Name=FBgn0085391.1;Dir=sensecoverage=81.7;identity=99.8;matches=1008;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023461
Chr2	stalkie_big_nohaplotig	exon	161813198	161813381	100	-	.	Parent=FBgn0085391.1.mrna2;Target=FBgn0085391.1 1053 1236 +
Chr2	stalkie_big_nohaplotig	exon	161813553	161813927	99	-	.	Parent=FBgn0085391.1.mrna2;Target=FBgn0085391.1 678 1052 +
Chr2	stalkie_big_nohaplotig	exon	161814067	161814256	100	-	.	Parent=FBgn0085391.1.mrna2;Target=FBgn0085391.1 488 677 +
Chr2	stalkie_big_nohaplotig	exon	161824028	161824124	100	-	.	Parent=FBgn0085391.1.mrna2;Target=FBgn0085391.1 391 487 +
Chr2	stalkie_big_nohaplotig	exon	161824288	161824363	100	-	.	Parent=FBgn0085391.1.mrna2;Target=FBgn0085391.1 315 390 +
Chr2	stalkie_big_nohaplotig	exon	161828055	161828142	98	-	.	Parent=FBgn0085391.1.mrna2;Target=FBgn0085391.1 227 314 +
Chr2	stalkie_big_nohaplotig	CDS	161813198	161813381	.	-	0	Parent=FBgn0085391.1.mrna2;Target=FBgn0085391.1 1053 1236 +
Chr2	stalkie_big_nohaplotig	CDS	161813553	161813927	.	-	0	Parent=FBgn0085391.1.mrna2;Target=FBgn0085391.1 678 1052 +
Chr2	stalkie_big_nohaplotig	CDS	161814067	161814256	.	-	1	Parent=FBgn0085391.1.mrna2;Target=FBgn0085391.1 488 677 +
Chr2	stalkie_big_nohaplotig	CDS	161824028	161824124	.	-	2	Parent=FBgn0085391.1.mrna2;Target=FBgn0085391.1 391 487 +
Chr2	stalkie_big_nohaplotig	CDS	161824288	161824363	.	-	0	Parent=FBgn0085391.1.mrna2;Target=FBgn0085391.1 315 390 +
Chr2	stalkie_big_nohaplotig	CDS	161828055	161828142	.	-	1	Parent=FBgn0085391.1.mrna2;Target=FBgn0085391.1 227 314 +
Chr2	gffcl	locus	161806189	161808087	.	+	.	ID=RLOC_00023462;geneIDs=comp153009_c0_seq1.path1;transcripts=comp153009_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161806189	161808087	.	+	.	ID=comp153009_c0_seq1.mrna1;geneID=comp153009_c0_seq1.path1;Name=comp153009_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1884;mismatches=15;indels=0;unknowns=0;Target=comp153009_c0_seq1 1899 1 .;CDS_Target=comp153009_c0_seq1 1474 1409 .;locus=RLOC_00023462
Chr2	stalkie_big_nohaplotig	exon	161806189	161808087	99	+	.	Parent=comp153009_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	161807597	161807662	.	+	0	Parent=comp153009_c0_seq1.mrna1
Chr2	gffcl	locus	161904041	162125156	.	+	.	ID=RLOC_00023463;geneIDs=FBgn0085413.1.path1;transcripts=FBgn0085413.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161904041	162125156	.	+	.	ID=FBgn0085413.1.mrna1;geneID=FBgn0085413.1.path1;Name=FBgn0085413.1;Dir=sensecoverage=96.2;identity=99.2;matches=5484;mismatches=39;indels=5;unknowns=0;locus=RLOC_00023463
Chr2	stalkie_big_nohaplotig	exon	161904041	161904050	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 226 235 +
Chr2	stalkie_big_nohaplotig	exon	161915092	161915103	75	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 254 264 +
Chr2	stalkie_big_nohaplotig	exon	161917877	161917884	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 265 272 +
Chr2	stalkie_big_nohaplotig	exon	161923518	161923521	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 273 276 +
Chr2	stalkie_big_nohaplotig	exon	161932129	161932134	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 277 282 +
Chr2	stalkie_big_nohaplotig	exon	161932142	161932144	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 322 324 +
Chr2	stalkie_big_nohaplotig	exon	161948903	161948910	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 325 332 +
Chr2	stalkie_big_nohaplotig	exon	161954413	161954418	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 333 338 +
Chr2	stalkie_big_nohaplotig	exon	161985952	161985965	61	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 339 356 +
Chr2	stalkie_big_nohaplotig	exon	161992842	161992847	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 357 362 +
Chr2	stalkie_big_nohaplotig	exon	161996332	161996333	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 363 364 +
Chr2	stalkie_big_nohaplotig	exon	161999938	161999945	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 365 372 +
Chr2	stalkie_big_nohaplotig	exon	162027187	162027190	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 373 376 +
Chr2	stalkie_big_nohaplotig	exon	162029402	162029404	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 377 379 +
Chr2	stalkie_big_nohaplotig	exon	162036805	162036812	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 380 387 +
Chr2	stalkie_big_nohaplotig	exon	162041990	162041993	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 388 391 +
Chr2	stalkie_big_nohaplotig	exon	162043848	162043861	78	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 392 405 +
Chr2	stalkie_big_nohaplotig	exon	162049192	162049197	83	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 406 411 +
Chr2	stalkie_big_nohaplotig	exon	162055642	162055648	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 412 418 +
Chr2	stalkie_big_nohaplotig	exon	162063823	162063829	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 419 425 +
Chr2	stalkie_big_nohaplotig	exon	162068223	162068227	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 426 430 +
Chr2	stalkie_big_nohaplotig	exon	162068238	162068240	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 476 478 +
Chr2	stalkie_big_nohaplotig	exon	162068332	162068333	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 479 480 +
Chr2	stalkie_big_nohaplotig	exon	162075573	162075574	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 481 482 +
Chr2	stalkie_big_nohaplotig	exon	162087914	162087917	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 483 486 +
Chr2	stalkie_big_nohaplotig	exon	162117247	162118098	99	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 487 1338 +
Chr2	stalkie_big_nohaplotig	exon	162118157	162118716	98	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 1339 1898 +
Chr2	stalkie_big_nohaplotig	exon	162118773	162119697	99	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 1899 2823 +
Chr2	stalkie_big_nohaplotig	exon	162119775	162119924	98	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 2824 2973 +
Chr2	stalkie_big_nohaplotig	exon	162119983	162120456	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 2974 3447 +
Chr2	stalkie_big_nohaplotig	exon	162121625	162122203	99	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 3448 4026 +
Chr2	stalkie_big_nohaplotig	exon	162122625	162122747	100	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 4027 4149 +
Chr2	stalkie_big_nohaplotig	exon	162123218	162123419	99	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 4150 4351 +
Chr2	stalkie_big_nohaplotig	exon	162123534	162123906	98	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 4352 4724 +
Chr2	stalkie_big_nohaplotig	exon	162123972	162124794	99	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 4725 5547 +
Chr2	stalkie_big_nohaplotig	exon	162124851	162125156	99	+	.	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 5548 5853 +
Chr2	stalkie_big_nohaplotig	CDS	161948908	161948910	.	+	0	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 330 332 +
Chr2	stalkie_big_nohaplotig	CDS	161954413	161954418	.	+	0	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 333 338 +
Chr2	stalkie_big_nohaplotig	CDS	161985952	161985965	.	+	0	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 339 356 +
Chr2	stalkie_big_nohaplotig	CDS	161992842	161992847	.	+	1	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 357 362 +
Chr2	stalkie_big_nohaplotig	CDS	161996332	161996333	.	+	1	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 363 364 +
Chr2	stalkie_big_nohaplotig	CDS	161999938	161999945	.	+	2	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 365 372 +
Chr2	stalkie_big_nohaplotig	CDS	162027187	162027190	.	+	0	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 373 376 +
Chr2	stalkie_big_nohaplotig	CDS	162029402	162029404	.	+	2	Parent=FBgn0085413.1.mrna1;Target=FBgn0085413.1 377 379 +
Chr2	gffcl	locus	161908254	161909603	.	+	.	ID=RLOC_00023464;geneIDs=ORF1117.path1;transcripts=ORF1117.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161908254	161909603	.	+	.	ID=ORF1117.mrna1;geneID=ORF1117.path1;Name=ORF1117;Dir=sensecoverage=100.0;identity=99.7;matches=1223;mismatches=4;indels=0;unknowns=0;locus=RLOC_00023464
Chr2	stalkie_big_nohaplotig	exon	161908254	161908438	100	+	.	Parent=ORF1117.mrna1;Target=ORF1117 1 185 +
Chr2	stalkie_big_nohaplotig	exon	161908562	161909603	99	+	.	Parent=ORF1117.mrna1;Target=ORF1117 186 1227 +
Chr2	stalkie_big_nohaplotig	CDS	161908254	161908438	.	+	0	Parent=ORF1117.mrna1;Target=ORF1117 1 185 +
Chr2	stalkie_big_nohaplotig	CDS	161908562	161909603	.	+	1	Parent=ORF1117.mrna1;Target=ORF1117 186 1227 +
Chr2	gffcl	locus	161946799	161953192	.	+	.	ID=RLOC_00023465;geneIDs=comp163846_c1_seq1.path1;transcripts=comp163846_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161946799	161953192	.	+	.	ID=comp163846_c1_seq1.mrna1;geneID=comp163846_c1_seq1.path1;Name=comp163846_c1_seq1;Dir=antisensecoverage=99.7;identity=99.5;matches=5695;mismatches=26;indels=1;unknowns=0;Target=comp163846_c1_seq1 1336 1962 .;locus=RLOC_00023465
Chr2	stalkie_big_nohaplotig	exon	161946799	161948756	99	+	.	Parent=comp163846_c1_seq1.mrna1;Target=comp163846_c1_seq1 3780 5737 -
Chr2	stalkie_big_nohaplotig	exon	161949429	161953192	99	+	.	Parent=comp163846_c1_seq1.mrna1;Target=comp163846_c1_seq1 17 3779 -
Chr2	stalkie_big_nohaplotig	CDS	161951246	161951872	.	+	0	Parent=comp163846_c1_seq1.mrna1
Chr2	gffcl	locus	161955632	161957057	.	-	.	ID=RLOC_00023466;geneIDs=ORF802.path1;transcripts=ORF802.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161955632	161957057	.	-	.	ID=ORF802.mrna1;geneID=ORF802.path1;Name=ORF802;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1414;mismatches=8;indels=4;unknowns=0;Target=ORF802 1422 1 .;locus=RLOC_00023466
Chr2	stalkie_big_nohaplotig	exon	161955632	161957057	99	-	.	Parent=ORF802.mrna1
Chr2	stalkie_big_nohaplotig	CDS	161955632	161957057	.	-	0	Parent=ORF802.mrna1
Chr2	gffcl	locus	161958502	161959534	.	-	.	ID=RLOC_00023467;geneIDs=comp156189_c0_seq1.path1;transcripts=comp156189_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161958502	161959534	.	-	.	ID=comp156189_c0_seq1.mrna1;geneID=comp156189_c0_seq1.path1;Name=comp156189_c0_seq1;Dir=indeterminatecoverage=98.5;identity=99.3;matches=1027;mismatches=6;indels=1;unknowns=0;Target=comp156189_c0_seq1 1050 17 .;CDS_Target=comp156189_c0_seq1 696 511 .;locus=RLOC_00023467
Chr2	stalkie_big_nohaplotig	exon	161958502	161959534	99	-	.	Parent=comp156189_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	161958856	161959041	.	-	0	Parent=comp156189_c0_seq1.mrna1
Chr2	gffcl	locus	161959549	161960255	.	-	.	ID=RLOC_00023468;geneIDs=comp153214_c0_seq1.path1;transcripts=comp153214_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161959549	161960255	.	-	.	ID=comp153214_c0_seq1.mrna1;geneID=comp153214_c0_seq1.path1;Name=comp153214_c0_seq1;Dir=indeterminatecoverage=99.7;identity=99.0;matches=700;mismatches=7;indels=0;unknowns=0;Target=comp153214_c0_seq1 707 1 .;CDS_Target=comp153214_c0_seq1 230 3 .;locus=RLOC_00023468
Chr2	stalkie_big_nohaplotig	exon	161959549	161960255	99	-	.	Parent=comp153214_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	161960026	161960253	.	-	0	Parent=comp153214_c0_seq1.mrna1
Chr2	gffcl	locus	161962099	161962176	.	+	.	ID=RLOC_00023469;geneIDs=comp161051_c0_seq1.path2;transcripts=comp161051_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	161962099	161962176	.	+	.	ID=comp161051_c0_seq1.mrna2;geneID=comp161051_c0_seq1.path2;Name=comp161051_c0_seq1;Dir=indeterminatecoverage=4.1;identity=97.4;matches=76;mismatches=2;indels=0;unknowns=0;Target=comp161051_c0_seq1 1913 1836 .;locus=RLOC_00023469
Chr2	stalkie_big_nohaplotig	exon	161962099	161962176	97	+	.	Parent=comp161051_c0_seq1.mrna2
Chr2	gffcl	locus	161965452	161967059	.	+	.	ID=RLOC_00023470;geneIDs=AAEL007644.1.path1;transcripts=AAEL007644.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161965452	161967059	.	+	.	ID=AAEL007644.1.mrna1;geneID=AAEL007644.1.path1;Name=AAEL007644.1;Dir=sensecoverage=97.9;identity=99.5;matches=1418;mismatches=7;indels=0;unknowns=0;locus=RLOC_00023470
Chr2	stalkie_big_nohaplotig	exon	161965452	161965662	99	+	.	Parent=AAEL007644.1.mrna1;Target=AAEL007644.1 31 241 +
Chr2	stalkie_big_nohaplotig	exon	161965724	161965858	100	+	.	Parent=AAEL007644.1.mrna1;Target=AAEL007644.1 242 376 +
Chr2	stalkie_big_nohaplotig	exon	161965918	161966482	99	+	.	Parent=AAEL007644.1.mrna1;Target=AAEL007644.1 377 941 +
Chr2	stalkie_big_nohaplotig	exon	161966546	161967059	99	+	.	Parent=AAEL007644.1.mrna1;Target=AAEL007644.1 942 1455 +
Chr2	stalkie_big_nohaplotig	CDS	161965452	161965662	.	+	0	Parent=AAEL007644.1.mrna1;Target=AAEL007644.1 31 241 +
Chr2	stalkie_big_nohaplotig	CDS	161965724	161965858	.	+	2	Parent=AAEL007644.1.mrna1;Target=AAEL007644.1 242 376 +
Chr2	stalkie_big_nohaplotig	CDS	161965918	161966482	.	+	2	Parent=AAEL007644.1.mrna1;Target=AAEL007644.1 377 941 +
Chr2	stalkie_big_nohaplotig	CDS	161966546	161967059	.	+	1	Parent=AAEL007644.1.mrna1;Target=AAEL007644.1 942 1455 +
Chr2	gffcl	locus	161983474	161984137	.	-	.	ID=RLOC_00023472;geneIDs=comp149713_c0_seq1.path1;transcripts=comp149713_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	161983474	161984137	.	-	.	ID=comp149713_c0_seq1.mrna1;geneID=comp149713_c0_seq1.path1;Name=comp149713_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=661;mismatches=3;indels=0;unknowns=0;Target=comp149713_c0_seq1 664 1 .;CDS_Target=comp149713_c0_seq1 250 242 .;locus=RLOC_00023472
Chr2	stalkie_big_nohaplotig	exon	161983474	161984137	99	-	.	Parent=comp149713_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	161983888	161983896	.	-	0	Parent=comp149713_c0_seq1.mrna1
Chr2	gffcl	locus	162001943	162003605	.	+	.	ID=RLOC_00023473;geneIDs=comp153892_c0_seq1.path2;transcripts=comp153892_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	162001943	162003605	.	+	.	ID=comp153892_c0_seq1.mrna2;geneID=comp153892_c0_seq1.path2;Name=comp153892_c0_seq1;Dir=indeterminatecoverage=98.9;identity=95.5;matches=1593;mismatches=52;indels=23;unknowns=0;Target=comp153892_c0_seq1 1669 20 .;CDS_Target=comp153892_c0_seq1 1357 1235 .;locus=RLOC_00023473
Chr2	stalkie_big_nohaplotig	exon	162001943	162003605	95	+	.	Parent=comp153892_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	162003153	162003293	.	+	0	Parent=comp153892_c0_seq1.mrna2
Chr2	gffcl	locus	162040161	162041045	.	-	.	ID=RLOC_00023474;geneIDs=Dv_FBgn0206941.2.path3;transcripts=Dv_FBgn0206941.2.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	162040161	162041045	.	-	.	ID=Dv_FBgn0206941.2.mrna3;geneID=Dv_FBgn0206941.2.path3;Name=Dv_FBgn0206941.2;Dir=indeterminatecoverage=100.0;identity=99.9;matches=884;mismatches=1;indels=0;unknowns=0;Target=Dv_FBgn0206941.2 885 1 .;locus=RLOC_00023474
Chr2	stalkie_big_nohaplotig	exon	162040161	162041045	99	-	.	Parent=Dv_FBgn0206941.2.mrna3
Chr2	stalkie_big_nohaplotig	CDS	162040161	162041045	.	-	0	Parent=Dv_FBgn0206941.2.mrna3
Chr2	gffcl	locus	162050246	162050429	.	+	.	ID=RLOC_00023475;geneIDs=comp155434_c0_seq1.path1;transcripts=comp155434_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162050246	162050429	.	+	.	ID=comp155434_c0_seq1.mrna1;geneID=comp155434_c0_seq1.path1;Name=comp155434_c0_seq1;Dir=indeterminatecoverage=28.5;identity=99.5;matches=183;mismatches=1;indels=0;unknowns=0;Target=comp155434_c0_seq1 184 1 .;locus=RLOC_00023475
Chr2	stalkie_big_nohaplotig	exon	162050246	162050429	99	+	.	Parent=comp155434_c0_seq1.mrna1
Chr2	gffcl	locus	162051402	162053971	.	-	.	ID=RLOC_00023476;geneIDs=FBgn0039298.2.path1;transcripts=FBgn0039298.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162051402	162053971	.	-	.	ID=FBgn0039298.2.mrna1;geneID=FBgn0039298.2.path1;Name=FBgn0039298.2;Dir=sensecoverage=100.0;identity=99.6;matches=798;mismatches=2;indels=1;unknowns=0;locus=RLOC_00023476
Chr2	stalkie_big_nohaplotig	exon	162051402	162051700	99	-	.	Parent=FBgn0039298.2.mrna1;Target=FBgn0039298.2 503 801 +
Chr2	stalkie_big_nohaplotig	exon	162051762	162051901	100	-	.	Parent=FBgn0039298.2.mrna1;Target=FBgn0039298.2 363 502 +
Chr2	stalkie_big_nohaplotig	exon	162052057	162052206	99	-	.	Parent=FBgn0039298.2.mrna1;Target=FBgn0039298.2 212 362 +
Chr2	stalkie_big_nohaplotig	exon	162052275	162052358	100	-	.	Parent=FBgn0039298.2.mrna1;Target=FBgn0039298.2 128 211 +
Chr2	stalkie_big_nohaplotig	exon	162053845	162053971	100	-	.	Parent=FBgn0039298.2.mrna1;Target=FBgn0039298.2 1 127 +
Chr2	stalkie_big_nohaplotig	CDS	162051402	162051700	.	-	2	Parent=FBgn0039298.2.mrna1;Target=FBgn0039298.2 503 801 +
Chr2	stalkie_big_nohaplotig	CDS	162051762	162051843	.	-	0	Parent=FBgn0039298.2.mrna1;Target=FBgn0039298.2 421 502 +
Chr2	gffcl	locus	162061176	162065126	.	-	.	ID=RLOC_00023477;geneIDs=FBgn0039297.1.path1;transcripts=FBgn0039297.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162061176	162065126	.	-	.	ID=FBgn0039297.1.mrna1;geneID=FBgn0039297.1.path1;Name=FBgn0039297.1;Dir=sensecoverage=100.0;identity=99.0;matches=802;mismatches=8;indels=0;unknowns=0;locus=RLOC_00023477
Chr2	stalkie_big_nohaplotig	exon	162061176	162061374	98	-	.	Parent=FBgn0039297.1.mrna1;Target=FBgn0039297.1 612 810 +
Chr2	stalkie_big_nohaplotig	exon	162061444	162061689	98	-	.	Parent=FBgn0039297.1.mrna1;Target=FBgn0039297.1 366 611 +
Chr2	stalkie_big_nohaplotig	exon	162064676	162064913	99	-	.	Parent=FBgn0039297.1.mrna1;Target=FBgn0039297.1 128 365 +
Chr2	stalkie_big_nohaplotig	exon	162065000	162065126	99	-	.	Parent=FBgn0039297.1.mrna1;Target=FBgn0039297.1 1 127 +
Chr2	stalkie_big_nohaplotig	CDS	162061176	162061374	.	-	1	Parent=FBgn0039297.1.mrna1;Target=FBgn0039297.1 612 810 +
Chr2	stalkie_big_nohaplotig	CDS	162061444	162061689	.	-	1	Parent=FBgn0039297.1.mrna1;Target=FBgn0039297.1 366 611 +
Chr2	stalkie_big_nohaplotig	CDS	162064676	162064913	.	-	2	Parent=FBgn0039297.1.mrna1;Target=FBgn0039297.1 128 365 +
Chr2	stalkie_big_nohaplotig	CDS	162065000	162065126	.	-	0	Parent=FBgn0039297.1.mrna1;Target=FBgn0039297.1 1 127 +
Chr2	gffcl	locus	162127392	162129803	.	-	.	ID=RLOC_00023478;geneIDs=comp157932_c0_seq1.path1;transcripts=comp157932_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162127392	162129803	.	-	.	ID=comp157932_c0_seq1.mrna1;geneID=comp157932_c0_seq1.path1;Name=comp157932_c0_seq1;Dir=sensecoverage=99.9;identity=99.4;matches=774;mismatches=5;indels=0;unknowns=0;Target=comp157932_c0_seq1 586 684 +;locus=RLOC_00023478
Chr2	stalkie_big_nohaplotig	exon	162127392	162127605	99	-	.	Parent=comp157932_c0_seq1.mrna1;Target=comp157932_c0_seq1 567 780 +
Chr2	stalkie_big_nohaplotig	exon	162129239	162129803	99	-	.	Parent=comp157932_c0_seq1.mrna1;Target=comp157932_c0_seq1 2 566 +
Chr2	stalkie_big_nohaplotig	CDS	162127488	162127586	.	-	0	Parent=comp157932_c0_seq1.mrna1
Chr2	gffcl	locus	162132065	162133217	.	-	.	ID=RLOC_00023479;geneIDs=comp153735_c0_seq1.path1,comp156275_c0_seq1.path1;transcripts=comp153735_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162132576	162133217	.	-	.	ID=comp153735_c0_seq1.mrna1;geneID=comp153735_c0_seq1.path1;Name=comp153735_c0_seq1;Dir=indeterminatecoverage=99.1;identity=99.4;matches=639;mismatches=3;indels=1;unknowns=0;Target=comp153735_c0_seq1 643 1 .;CDS_Target=comp153735_c0_seq1 557 486 .;locus=RLOC_00023479
Chr2	stalkie_big_nohaplotig	exon	162132576	162133217	99	-	.	Parent=comp153735_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	162132662	162132732	.	-	0	Parent=comp153735_c0_seq1.mrna1
Chr2	gffcl	locus	162205969	162206896	.	+	.	ID=RLOC_00023483;geneIDs=FBgn0038610.1.path1;transcripts=FBgn0038610.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162205969	162206896	.	+	.	ID=FBgn0038610.1.mrna1;geneID=FBgn0038610.1.path1;Name=FBgn0038610.1;Dir=sensecoverage=99.2;identity=99.7;matches=866;mismatches=3;indels=0;unknowns=0;locus=RLOC_00023483
Chr2	stalkie_big_nohaplotig	exon	162205969	162206109	99	+	.	Parent=FBgn0038610.1.mrna1;Target=FBgn0038610.1 8 148 +
Chr2	stalkie_big_nohaplotig	exon	162206169	162206896	99	+	.	Parent=FBgn0038610.1.mrna1;Target=FBgn0038610.1 149 876 +
Chr2	stalkie_big_nohaplotig	CDS	162205971	162206109	.	+	0	Parent=FBgn0038610.1.mrna1;Target=FBgn0038610.1 10 148 +
Chr2	stalkie_big_nohaplotig	CDS	162206169	162206896	.	+	2	Parent=FBgn0038610.1.mrna1;Target=FBgn0038610.1 149 876 +
Chr2	gffcl	locus	162220263	162230263	.	+	.	ID=RLOC_00023484;geneIDs=FBgn0004618.1.path1,comp160602_c0_seq1.path1;transcripts=comp160602_c0_seq1.mrna1,FBgn0004618.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162220263	162230263	.	+	.	ID=comp160602_c0_seq1.mrna1;geneID=comp160602_c0_seq1.path1;Name=comp160602_c0_seq1;Dir=sensecoverage=99.2;identity=99.7;matches=2321;mismatches=8;indels=0;unknowns=0;locus=RLOC_00023484
Chr2	stalkie_big_nohaplotig	exon	162220263	162220377	100	+	.	Parent=comp160602_c0_seq1.mrna1;Target=comp160602_c0_seq1 20 134 +
Chr2	stalkie_big_nohaplotig	exon	162224999	162225129	98	+	.	Parent=comp160602_c0_seq1.mrna1;Target=comp160602_c0_seq1 135 265 +
Chr2	stalkie_big_nohaplotig	exon	162226776	162226906	100	+	.	Parent=comp160602_c0_seq1.mrna1;Target=comp160602_c0_seq1 266 396 +
Chr2	stalkie_big_nohaplotig	exon	162227949	162228572	99	+	.	Parent=comp160602_c0_seq1.mrna1;Target=comp160602_c0_seq1 397 1020 +
Chr2	stalkie_big_nohaplotig	exon	162228641	162229160	99	+	.	Parent=comp160602_c0_seq1.mrna1;Target=comp160602_c0_seq1 1021 1540 +
Chr2	stalkie_big_nohaplotig	exon	162229230	162229502	100	+	.	Parent=comp160602_c0_seq1.mrna1;Target=comp160602_c0_seq1 1541 1813 +
Chr2	stalkie_big_nohaplotig	exon	162229729	162230263	99	+	.	Parent=comp160602_c0_seq1.mrna1;Target=comp160602_c0_seq1 1814 2348 +
Chr2	stalkie_big_nohaplotig	CDS	162225084	162225129	.	+	0	Parent=comp160602_c0_seq1.mrna1;Target=comp160602_c0_seq1 220 265 +
Chr2	stalkie_big_nohaplotig	CDS	162226776	162226906	.	+	2	Parent=comp160602_c0_seq1.mrna1;Target=comp160602_c0_seq1 266 396 +
Chr2	stalkie_big_nohaplotig	CDS	162227949	162228572	.	+	0	Parent=comp160602_c0_seq1.mrna1;Target=comp160602_c0_seq1 397 1020 +
Chr2	stalkie_big_nohaplotig	CDS	162228641	162228928	.	+	0	Parent=comp160602_c0_seq1.mrna1;Target=comp160602_c0_seq1 1021 1308 +
Chr2	stalkie_big_nohaplotig	mRNA	162225039	162229804	.	+	.	ID=FBgn0004618.1.mrna1;geneID=FBgn0004618.1.path1;Name=FBgn0004618.1;Dir=sensecoverage=100.0;identity=99.6;matches=1621;mismatches=7;indels=0;unknowns=19;locus=RLOC_00023484
Chr2	stalkie_big_nohaplotig	exon	162225039	162225129	97	+	.	Parent=FBgn0004618.1.mrna1;Target=FBgn0004618.1 1 91 +
Chr2	stalkie_big_nohaplotig	exon	162226776	162226906	100	+	.	Parent=FBgn0004618.1.mrna1;Target=FBgn0004618.1 92 222 +
Chr2	stalkie_big_nohaplotig	exon	162227949	162228572	99	+	.	Parent=FBgn0004618.1.mrna1;Target=FBgn0004618.1 223 846 +
Chr2	stalkie_big_nohaplotig	exon	162228641	162228922	99	+	.	Parent=FBgn0004618.1.mrna1;Target=FBgn0004618.1 847 1128 +
Chr2	stalkie_big_nohaplotig	exon	162228991	162229160	99	+	.	Parent=FBgn0004618.1.mrna1;Target=FBgn0004618.1 1129 1298 +
Chr2	stalkie_big_nohaplotig	exon	162229230	162229502	100	+	.	Parent=FBgn0004618.1.mrna1;Target=FBgn0004618.1 1299 1571 +
Chr2	stalkie_big_nohaplotig	exon	162229729	162229804	98	+	.	Parent=FBgn0004618.1.mrna1;Target=FBgn0004618.1 1572 1647 +
Chr2	stalkie_big_nohaplotig	CDS	162225039	162225129	.	+	0	Parent=FBgn0004618.1.mrna1;Target=FBgn0004618.1 1 91 +
Chr2	stalkie_big_nohaplotig	CDS	162226776	162226906	.	+	2	Parent=FBgn0004618.1.mrna1;Target=FBgn0004618.1 92 222 +
Chr2	stalkie_big_nohaplotig	CDS	162227949	162228572	.	+	0	Parent=FBgn0004618.1.mrna1;Target=FBgn0004618.1 223 846 +
Chr2	stalkie_big_nohaplotig	CDS	162228641	162228922	.	+	0	Parent=FBgn0004618.1.mrna1;Target=FBgn0004618.1 847 1128 +
Chr2	stalkie_big_nohaplotig	CDS	162228991	162229160	.	+	0	Parent=FBgn0004618.1.mrna1;Target=FBgn0004618.1 1129 1298 +
Chr2	stalkie_big_nohaplotig	CDS	162229230	162229502	.	+	1	Parent=FBgn0004618.1.mrna1;Target=FBgn0004618.1 1299 1571 +
Chr2	stalkie_big_nohaplotig	CDS	162229729	162229804	.	+	1	Parent=FBgn0004618.1.mrna1;Target=FBgn0004618.1 1572 1647 +
Chr2	gffcl	locus	162232337	162233481	.	-	.	ID=RLOC_00023485;geneIDs=FBgn0038609.1.path1;transcripts=FBgn0038609.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162232337	162233481	.	-	.	ID=FBgn0038609.1.mrna1;geneID=FBgn0038609.1.path1;Name=FBgn0038609.1;Dir=sensecoverage=100.0;identity=99.0;matches=1075;mismatches=11;indels=0;unknowns=0;locus=RLOC_00023485
Chr2	stalkie_big_nohaplotig	exon	162232337	162233145	98	-	.	Parent=FBgn0038609.1.mrna1;Target=FBgn0038609.1 278 1086 +
Chr2	stalkie_big_nohaplotig	exon	162233205	162233481	99	-	.	Parent=FBgn0038609.1.mrna1;Target=FBgn0038609.1 1 277 +
Chr2	stalkie_big_nohaplotig	CDS	162232337	162233145	.	-	2	Parent=FBgn0038609.1.mrna1;Target=FBgn0038609.1 278 1086 +
Chr2	stalkie_big_nohaplotig	CDS	162233205	162233481	.	-	0	Parent=FBgn0038609.1.mrna1;Target=FBgn0038609.1 1 277 +
Chr2	gffcl	locus	162233938	162235125	.	+	.	ID=RLOC_00023486;geneIDs=FBgn0038608.1.path1;transcripts=FBgn0038608.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162233938	162235125	.	+	.	ID=FBgn0038608.1.mrna1;geneID=FBgn0038608.1.path1;Name=FBgn0038608.1;Dir=sensecoverage=99.7;identity=98.9;matches=752;mismatches=8;indels=0;unknowns=3;locus=RLOC_00023486
Chr2	stalkie_big_nohaplotig	exon	162233938	162234003	96	+	.	Parent=FBgn0038608.1.mrna1;Target=FBgn0038608.1 1 66 +
Chr2	stalkie_big_nohaplotig	exon	162234155	162234336	100	+	.	Parent=FBgn0038608.1.mrna1;Target=FBgn0038608.1 67 248 +
Chr2	stalkie_big_nohaplotig	exon	162234395	162234622	99	+	.	Parent=FBgn0038608.1.mrna1;Target=FBgn0038608.1 249 476 +
Chr2	stalkie_big_nohaplotig	exon	162234684	162234825	97	+	.	Parent=FBgn0038608.1.mrna1;Target=FBgn0038608.1 477 618 +
Chr2	stalkie_big_nohaplotig	exon	162234908	162235009	99	+	.	Parent=FBgn0038608.1.mrna1;Target=FBgn0038608.1 619 720 +
Chr2	stalkie_big_nohaplotig	exon	162235083	162235125	100	+	.	Parent=FBgn0038608.1.mrna1;Target=FBgn0038608.1 721 763 +
Chr2	stalkie_big_nohaplotig	CDS	162233938	162234003	.	+	0	Parent=FBgn0038608.1.mrna1;Target=FBgn0038608.1 1 66 +
Chr2	stalkie_big_nohaplotig	CDS	162234155	162234336	.	+	0	Parent=FBgn0038608.1.mrna1;Target=FBgn0038608.1 67 248 +
Chr2	stalkie_big_nohaplotig	CDS	162234395	162234622	.	+	1	Parent=FBgn0038608.1.mrna1;Target=FBgn0038608.1 249 476 +
Chr2	stalkie_big_nohaplotig	CDS	162234684	162234825	.	+	1	Parent=FBgn0038608.1.mrna1;Target=FBgn0038608.1 477 618 +
Chr2	stalkie_big_nohaplotig	CDS	162234908	162235009	.	+	0	Parent=FBgn0038608.1.mrna1;Target=FBgn0038608.1 619 720 +
Chr2	stalkie_big_nohaplotig	CDS	162235083	162235124	.	+	0	Parent=FBgn0038608.1.mrna1;Target=FBgn0038608.1 721 762 +
Chr2	gffcl	locus	162258437	162258636	.	-	.	ID=RLOC_00023487;geneIDs=Dp_FBgn0245446.path5;transcripts=Dp_FBgn0245446.mrna5
Chr2	stalkie_big_nohaplotig	mRNA	162258437	162258636	.	-	.	ID=Dp_FBgn0245446.mrna5;geneID=Dp_FBgn0245446.path5;Name=Dp_FBgn0245446;Dir=indeterminatecoverage=76.6;identity=98.0;matches=196;mismatches=4;indels=0;unknowns=0;Target=Dp_FBgn0245446 200 1 .;CDS_Target=Dp_FBgn0245446 198 1 .;locus=RLOC_00023487
Chr2	stalkie_big_nohaplotig	exon	162258437	162258636	98	-	.	Parent=Dp_FBgn0245446.mrna5
Chr2	stalkie_big_nohaplotig	CDS	162258439	162258636	.	-	0	Parent=Dp_FBgn0245446.mrna5
Chr2	gffcl	locus	162275177	162276510	.	-	.	ID=RLOC_00023488;geneIDs=comp139440_c0_seq1.path2;transcripts=comp139440_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	162275177	162276510	.	-	.	ID=comp139440_c0_seq1.mrna2;geneID=comp139440_c0_seq1.path2;Name=comp139440_c0_seq1;Dir=indeterminatecoverage=100.0;identity=90.9;matches=745;mismatches=36;indels=39;unknowns=0;Target=comp139440_c0_seq1 470 330 .;locus=RLOC_00023488
Chr2	stalkie_big_nohaplotig	exon	162275177	162275276	92	-	.	Parent=comp139440_c0_seq1.mrna2;Target=comp139440_c0_seq1 781 682 .
Chr2	stalkie_big_nohaplotig	exon	162275791	162276510	90	-	.	Parent=comp139440_c0_seq1.mrna2;Target=comp139440_c0_seq1 681 1 .
Chr2	stalkie_big_nohaplotig	CDS	162276028	162276180	.	-	0	Parent=comp139440_c0_seq1.mrna2
Chr2	gffcl	locus	162278258	162291430	.	+	.	ID=RLOC_00023489;geneIDs=FBgn0039081.1.path1;transcripts=FBgn0039081.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162278258	162291430	.	+	.	ID=FBgn0039081.1.mrna1;geneID=FBgn0039081.1.path1;Name=FBgn0039081.1;Dir=sensecoverage=100.0;identity=98.3;matches=1380;mismatches=24;indels=0;unknowns=0;locus=RLOC_00023489
Chr2	stalkie_big_nohaplotig	exon	162278258	162278550	97	+	.	Parent=FBgn0039081.1.mrna1;Target=FBgn0039081.1 1 293 +
Chr2	stalkie_big_nohaplotig	exon	162290070	162290344	98	+	.	Parent=FBgn0039081.1.mrna1;Target=FBgn0039081.1 294 568 +
Chr2	stalkie_big_nohaplotig	exon	162290505	162291287	98	+	.	Parent=FBgn0039081.1.mrna1;Target=FBgn0039081.1 569 1351 +
Chr2	stalkie_big_nohaplotig	exon	162291378	162291430	98	+	.	Parent=FBgn0039081.1.mrna1;Target=FBgn0039081.1 1352 1404 +
Chr2	stalkie_big_nohaplotig	CDS	162278297	162278550	.	+	0	Parent=FBgn0039081.1.mrna1;Target=FBgn0039081.1 40 293 +
Chr2	stalkie_big_nohaplotig	CDS	162290070	162290344	.	+	1	Parent=FBgn0039081.1.mrna1;Target=FBgn0039081.1 294 568 +
Chr2	stalkie_big_nohaplotig	CDS	162290505	162291287	.	+	2	Parent=FBgn0039081.1.mrna1;Target=FBgn0039081.1 569 1351 +
Chr2	stalkie_big_nohaplotig	CDS	162291378	162291430	.	+	2	Parent=FBgn0039081.1.mrna1;Target=FBgn0039081.1 1352 1404 +
Chr2	gffcl	locus	162417365	162461276	.	+	.	ID=RLOC_00023490;geneIDs=FBgn0004841.1.path1;transcripts=FBgn0004841.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162417365	162461276	.	+	.	ID=FBgn0004841.1.mrna1;geneID=FBgn0004841.1.path1;Name=FBgn0004841.1;Dir=sensecoverage=100.0;identity=99.9;matches=1531;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023490
Chr2	stalkie_big_nohaplotig	exon	162417365	162417576	99	+	.	Parent=FBgn0004841.1.mrna1;Target=FBgn0004841.1 1 212 +
Chr2	stalkie_big_nohaplotig	exon	162450792	162450937	100	+	.	Parent=FBgn0004841.1.mrna1;Target=FBgn0004841.1 213 358 +
Chr2	stalkie_big_nohaplotig	exon	162451468	162451681	99	+	.	Parent=FBgn0004841.1.mrna1;Target=FBgn0004841.1 359 572 +
Chr2	stalkie_big_nohaplotig	exon	162451807	162451941	100	+	.	Parent=FBgn0004841.1.mrna1;Target=FBgn0004841.1 573 707 +
Chr2	stalkie_big_nohaplotig	exon	162458092	162458172	100	+	.	Parent=FBgn0004841.1.mrna1;Target=FBgn0004841.1 708 788 +
Chr2	stalkie_big_nohaplotig	exon	162460355	162460702	100	+	.	Parent=FBgn0004841.1.mrna1;Target=FBgn0004841.1 789 1136 +
Chr2	stalkie_big_nohaplotig	exon	162460760	162460875	100	+	.	Parent=FBgn0004841.1.mrna1;Target=FBgn0004841.1 1137 1252 +
Chr2	stalkie_big_nohaplotig	exon	162460996	162461276	100	+	.	Parent=FBgn0004841.1.mrna1;Target=FBgn0004841.1 1253 1533 +
Chr2	stalkie_big_nohaplotig	CDS	162417365	162417576	.	+	0	Parent=FBgn0004841.1.mrna1;Target=FBgn0004841.1 1 212 +
Chr2	stalkie_big_nohaplotig	CDS	162450792	162450937	.	+	1	Parent=FBgn0004841.1.mrna1;Target=FBgn0004841.1 213 358 +
Chr2	stalkie_big_nohaplotig	CDS	162451468	162451681	.	+	2	Parent=FBgn0004841.1.mrna1;Target=FBgn0004841.1 359 572 +
Chr2	stalkie_big_nohaplotig	CDS	162451807	162451941	.	+	1	Parent=FBgn0004841.1.mrna1;Target=FBgn0004841.1 573 707 +
Chr2	stalkie_big_nohaplotig	CDS	162458092	162458172	.	+	1	Parent=FBgn0004841.1.mrna1;Target=FBgn0004841.1 708 788 +
Chr2	stalkie_big_nohaplotig	CDS	162460355	162460702	.	+	1	Parent=FBgn0004841.1.mrna1;Target=FBgn0004841.1 789 1136 +
Chr2	stalkie_big_nohaplotig	CDS	162460760	162460875	.	+	1	Parent=FBgn0004841.1.mrna1;Target=FBgn0004841.1 1137 1252 +
Chr2	stalkie_big_nohaplotig	CDS	162460996	162461276	.	+	2	Parent=FBgn0004841.1.mrna1;Target=FBgn0004841.1 1253 1533 +
Chr2	gffcl	locus	162549728	162827443	.	-	.	ID=RLOC_00023491;geneIDs=FBgn0037443.1.path2,comp163498_c1_seq1.path1;transcripts=comp163498_c1_seq1.mrna1,FBgn0037443.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	162549728	162827443	.	-	.	ID=comp163498_c1_seq1.mrna1;geneID=comp163498_c1_seq1.path1;Name=comp163498_c1_seq1;Dir=indeterminatecoverage=39.1;identity=98.2;matches=3322;mismatches=29;indels=31;unknowns=0;Target=comp163498_c1_seq1 6355 4772 .;locus=RLOC_00023491
Chr2	stalkie_big_nohaplotig	exon	162549728	162552677	99	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 7519 4576 .
Chr2	stalkie_big_nohaplotig	exon	162555290	162555296	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4575 4569 .
Chr2	stalkie_big_nohaplotig	exon	162559787	162559795	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4531 4523 .
Chr2	stalkie_big_nohaplotig	exon	162567658	162567665	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4504 4497 .
Chr2	stalkie_big_nohaplotig	exon	162574853	162574858	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4496 4491 .
Chr2	stalkie_big_nohaplotig	exon	162574863	162574874	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4435 4424 .
Chr2	stalkie_big_nohaplotig	exon	162578102	162578106	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4423 4419 .
Chr2	stalkie_big_nohaplotig	exon	162583941	162583953	48	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4418 4392 .
Chr2	stalkie_big_nohaplotig	exon	162596175	162596178	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4391 4388 .
Chr2	stalkie_big_nohaplotig	exon	162598229	162598232	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4387 4384 .
Chr2	stalkie_big_nohaplotig	exon	162599920	162599928	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4383 4375 .
Chr2	stalkie_big_nohaplotig	exon	162604324	162604334	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4371 4361 .
Chr2	stalkie_big_nohaplotig	exon	162604379	162604387	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4318 4310 .
Chr2	stalkie_big_nohaplotig	exon	162609135	162609140	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4309 4304 .
Chr2	stalkie_big_nohaplotig	exon	162610960	162610967	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4303 4296 .
Chr2	stalkie_big_nohaplotig	exon	162623189	162623194	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4295 4290 .
Chr2	stalkie_big_nohaplotig	exon	162628634	162628644	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4289 4279 .
Chr2	stalkie_big_nohaplotig	exon	162639226	162639233	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4273 4266 .
Chr2	stalkie_big_nohaplotig	exon	162649374	162649375	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4265 4264 .
Chr2	stalkie_big_nohaplotig	exon	162649389	162649398	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4246 4237 .
Chr2	stalkie_big_nohaplotig	exon	162649818	162649826	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4232 4224 .
Chr2	stalkie_big_nohaplotig	exon	162651377	162651379	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4223 4221 .
Chr2	stalkie_big_nohaplotig	exon	162651387	162651394	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4177 4170 .
Chr2	stalkie_big_nohaplotig	exon	162663012	162663021	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4117 4108 .
Chr2	stalkie_big_nohaplotig	exon	162670126	162670133	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4104 4097 .
Chr2	stalkie_big_nohaplotig	exon	162676788	162676791	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4096 4093 .
Chr2	stalkie_big_nohaplotig	exon	162685468	162685500	63	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4092 4071 .
Chr2	stalkie_big_nohaplotig	exon	162685706	162685816	90	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 4018 3908 .
Chr2	stalkie_big_nohaplotig	exon	162746469	162746478	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 3900 3891 .
Chr2	stalkie_big_nohaplotig	exon	162746487	162746496	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 3855 3846 .
Chr2	stalkie_big_nohaplotig	exon	162752079	162752085	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 3845 3839 .
Chr2	stalkie_big_nohaplotig	exon	162758525	162758528	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 3838 3835 .
Chr2	stalkie_big_nohaplotig	exon	162763838	162763843	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 3834 3829 .
Chr2	stalkie_big_nohaplotig	exon	162775804	162775806	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 3828 3826 .
Chr2	stalkie_big_nohaplotig	exon	162776942	162776946	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 3825 3821 .
Chr2	stalkie_big_nohaplotig	exon	162784866	162784867	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 3820 3819 .
Chr2	stalkie_big_nohaplotig	exon	162800926	162800932	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 3818 3812 .
Chr2	stalkie_big_nohaplotig	exon	162802879	162802885	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 3811 3805 .
Chr2	stalkie_big_nohaplotig	exon	162808965	162808966	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 3804 3803 .
Chr2	stalkie_big_nohaplotig	exon	162826770	162826771	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 3801 3800 .
Chr2	stalkie_big_nohaplotig	exon	162826827	162826835	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 3750 3742 .
Chr2	stalkie_big_nohaplotig	exon	162827438	162827443	100	-	.	Parent=comp163498_c1_seq1.mrna1;Target=comp163498_c1_seq1 3741 3736 .
Chr2	stalkie_big_nohaplotig	CDS	162550892	162552481	.	-	0	Parent=comp163498_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162741837	162746997	.	-	.	ID=FBgn0037443.1.mrna2;geneID=FBgn0037443.1.path2;Name=FBgn0037443.1;Dir=sensecoverage=100.0;identity=99.9;matches=1724;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023491
Chr2	stalkie_big_nohaplotig	exon	162741837	162741960	100	-	.	Parent=FBgn0037443.1.mrna2;Target=FBgn0037443.1 1602 1725 +
Chr2	stalkie_big_nohaplotig	exon	162742044	162742219	99	-	.	Parent=FBgn0037443.1.mrna2;Target=FBgn0037443.1 1426 1601 +
Chr2	stalkie_big_nohaplotig	exon	162742285	162742398	100	-	.	Parent=FBgn0037443.1.mrna2;Target=FBgn0037443.1 1312 1425 +
Chr2	stalkie_big_nohaplotig	exon	162743456	162743560	100	-	.	Parent=FBgn0037443.1.mrna2;Target=FBgn0037443.1 1207 1311 +
Chr2	stalkie_big_nohaplotig	exon	162743950	162744070	100	-	.	Parent=FBgn0037443.1.mrna2;Target=FBgn0037443.1 1086 1206 +
Chr2	stalkie_big_nohaplotig	exon	162744142	162744319	100	-	.	Parent=FBgn0037443.1.mrna2;Target=FBgn0037443.1 908 1085 +
Chr2	stalkie_big_nohaplotig	exon	162744392	162744519	100	-	.	Parent=FBgn0037443.1.mrna2;Target=FBgn0037443.1 780 907 +
Chr2	stalkie_big_nohaplotig	exon	162744595	162744764	100	-	.	Parent=FBgn0037443.1.mrna2;Target=FBgn0037443.1 610 779 +
Chr2	stalkie_big_nohaplotig	exon	162744842	162744906	100	-	.	Parent=FBgn0037443.1.mrna2;Target=FBgn0037443.1 545 609 +
Chr2	stalkie_big_nohaplotig	exon	162746380	162746574	100	-	.	Parent=FBgn0037443.1.mrna2;Target=FBgn0037443.1 350 544 +
Chr2	stalkie_big_nohaplotig	exon	162746649	162746997	100	-	.	Parent=FBgn0037443.1.mrna2;Target=FBgn0037443.1 1 349 +
Chr2	stalkie_big_nohaplotig	CDS	162741837	162741960	.	-	1	Parent=FBgn0037443.1.mrna2;Target=FBgn0037443.1 1602 1725 +
Chr2	stalkie_big_nohaplotig	CDS	162742044	162742219	.	-	0	Parent=FBgn0037443.1.mrna2;Target=FBgn0037443.1 1426 1601 +
Chr2	stalkie_big_nohaplotig	CDS	162742285	162742398	.	-	0	Parent=FBgn0037443.1.mrna2;Target=FBgn0037443.1 1312 1425 +
Chr2	stalkie_big_nohaplotig	CDS	162743456	162743560	.	-	0	Parent=FBgn0037443.1.mrna2;Target=FBgn0037443.1 1207 1311 +
Chr2	stalkie_big_nohaplotig	CDS	162743950	162744070	.	-	1	Parent=FBgn0037443.1.mrna2;Target=FBgn0037443.1 1086 1206 +
Chr2	stalkie_big_nohaplotig	CDS	162744142	162744319	.	-	2	Parent=FBgn0037443.1.mrna2;Target=FBgn0037443.1 908 1085 +
Chr2	stalkie_big_nohaplotig	CDS	162744392	162744519	.	-	1	Parent=FBgn0037443.1.mrna2;Target=FBgn0037443.1 780 907 +
Chr2	stalkie_big_nohaplotig	CDS	162744595	162744764	.	-	0	Parent=FBgn0037443.1.mrna2;Target=FBgn0037443.1 610 779 +
Chr2	stalkie_big_nohaplotig	CDS	162744842	162744906	.	-	2	Parent=FBgn0037443.1.mrna2;Target=FBgn0037443.1 545 609 +
Chr2	stalkie_big_nohaplotig	CDS	162746380	162746574	.	-	2	Parent=FBgn0037443.1.mrna2;Target=FBgn0037443.1 350 544 +
Chr2	stalkie_big_nohaplotig	CDS	162746649	162746997	.	-	0	Parent=FBgn0037443.1.mrna2;Target=FBgn0037443.1 1 349 +
Chr2	stalkie_big_nohaplotig	mRNA	162720216	162722126	.	-	.	ID=FBgn0027514.1.mrna1;geneID=FBgn0027514.1.path1;Name=FBgn0027514.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1911;mismatches=0;indels=0;unknowns=0;Target=FBgn0027514.1 1911 1 .;locus=RLOC_00023492
Chr2	stalkie_big_nohaplotig	exon	162720216	162722126	100	-	.	Parent=FBgn0027514.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	162720216	162722126	.	-	0	Parent=FBgn0027514.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162756599	162757486	.	-	.	ID=comp117384_c0_seq1.mrna1;geneID=comp117384_c0_seq1.path1;Name=comp117384_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=887;mismatches=1;indels=0;unknowns=0;Target=comp117384_c0_seq1 888 1 .;CDS_Target=comp117384_c0_seq1 234 163 .;locus=RLOC_00023492
Chr2	stalkie_big_nohaplotig	exon	162756599	162757486	99	-	.	Parent=comp117384_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	162757253	162757324	.	-	0	Parent=comp117384_c0_seq1.mrna1
Chr2	gffcl	locus	162667123	162668759	.	+	.	ID=RLOC_00023493;geneIDs=FBgn0038742.1.path1;transcripts=FBgn0038742.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162667123	162668759	.	+	.	ID=FBgn0038742.1.mrna1;geneID=FBgn0038742.1.path1;Name=FBgn0038742.1;Dir=sensecoverage=100.0;identity=99.9;matches=1271;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023493
Chr2	stalkie_big_nohaplotig	exon	162667123	162667201	100	+	.	Parent=FBgn0038742.1.mrna1;Target=FBgn0038742.1 1 79 +
Chr2	stalkie_big_nohaplotig	exon	162667515	162667733	99	+	.	Parent=FBgn0038742.1.mrna1;Target=FBgn0038742.1 80 298 +
Chr2	stalkie_big_nohaplotig	exon	162667786	162668759	100	+	.	Parent=FBgn0038742.1.mrna1;Target=FBgn0038742.1 299 1272 +
Chr2	stalkie_big_nohaplotig	CDS	162667123	162667201	.	+	0	Parent=FBgn0038742.1.mrna1;Target=FBgn0038742.1 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	162667515	162667733	.	+	2	Parent=FBgn0038742.1.mrna1;Target=FBgn0038742.1 80 298 +
Chr2	stalkie_big_nohaplotig	CDS	162667786	162668759	.	+	2	Parent=FBgn0038742.1.mrna1;Target=FBgn0038742.1 299 1272 +
Chr2	gffcl	locus	162670595	162671160	.	+	.	ID=RLOC_00023494;geneIDs=comp136701_c0_seq1.path1;transcripts=comp136701_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162670595	162671160	.	+	.	ID=comp136701_c0_seq1.mrna1;geneID=comp136701_c0_seq1.path1;Name=comp136701_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=565;mismatches=1;indels=1;unknowns=0;Target=comp136701_c0_seq1 567 1 .;CDS_Target=comp136701_c0_seq1 225 79 .;locus=RLOC_00023494
Chr2	stalkie_big_nohaplotig	exon	162670595	162671160	99	+	.	Parent=comp136701_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	162670672	162670818	.	+	0	Parent=comp136701_c0_seq1.mrna1
Chr2	gffcl	locus	162671761	162673066	.	-	.	ID=RLOC_00023495;geneIDs=FBgn0027864.1.path1;transcripts=FBgn0027864.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162671761	162673066	.	-	.	ID=FBgn0027864.1.mrna1;geneID=FBgn0027864.1.path1;Name=FBgn0027864.1;Dir=sensecoverage=100.0;identity=100.0;matches=1080;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023495
Chr2	stalkie_big_nohaplotig	exon	162671761	162671789	100	-	.	Parent=FBgn0027864.1.mrna1;Target=FBgn0027864.1 1052 1080 +
Chr2	stalkie_big_nohaplotig	exon	162671846	162672215	100	-	.	Parent=FBgn0027864.1.mrna1;Target=FBgn0027864.1 682 1051 +
Chr2	stalkie_big_nohaplotig	exon	162672273	162672390	100	-	.	Parent=FBgn0027864.1.mrna1;Target=FBgn0027864.1 564 681 +
Chr2	stalkie_big_nohaplotig	exon	162672446	162672784	100	-	.	Parent=FBgn0027864.1.mrna1;Target=FBgn0027864.1 225 563 +
Chr2	stalkie_big_nohaplotig	exon	162672843	162673066	100	-	.	Parent=FBgn0027864.1.mrna1;Target=FBgn0027864.1 1 224 +
Chr2	stalkie_big_nohaplotig	CDS	162671761	162671789	.	-	2	Parent=FBgn0027864.1.mrna1;Target=FBgn0027864.1 1052 1080 +
Chr2	stalkie_big_nohaplotig	CDS	162671846	162672215	.	-	0	Parent=FBgn0027864.1.mrna1;Target=FBgn0027864.1 682 1051 +
Chr2	stalkie_big_nohaplotig	CDS	162672273	162672390	.	-	1	Parent=FBgn0027864.1.mrna1;Target=FBgn0027864.1 564 681 +
Chr2	stalkie_big_nohaplotig	CDS	162672446	162672784	.	-	1	Parent=FBgn0027864.1.mrna1;Target=FBgn0027864.1 225 563 +
Chr2	stalkie_big_nohaplotig	CDS	162672843	162673066	.	-	0	Parent=FBgn0027864.1.mrna1;Target=FBgn0027864.1 1 224 +
Chr2	gffcl	locus	162688042	162688680	.	-	.	ID=RLOC_00023496;geneIDs=FBgn0003607.1.path1;transcripts=FBgn0003607.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162688042	162688680	.	-	.	ID=FBgn0003607.1.mrna1;geneID=FBgn0003607.1.path1;Name=FBgn0003607.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=639;mismatches=0;indels=0;unknowns=0;Target=FBgn0003607.1 639 1 .;locus=RLOC_00023496
Chr2	stalkie_big_nohaplotig	exon	162688042	162688680	100	-	.	Parent=FBgn0003607.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	162688042	162688680	.	-	0	Parent=FBgn0003607.1.mrna1
Chr2	gffcl	locus	162723362	162725614	.	+	.	ID=RLOC_00023498;geneIDs=FBgn0010282.1.path1;transcripts=FBgn0010282.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162723362	162725614	.	+	.	ID=FBgn0010282.1.mrna1;geneID=FBgn0010282.1.path1;Name=FBgn0010282.1;Dir=sensecoverage=100.0;identity=99.9;matches=1607;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023498
Chr2	stalkie_big_nohaplotig	exon	162723362	162723391	100	+	.	Parent=FBgn0010282.1.mrna1;Target=FBgn0010282.1 1 30 +
Chr2	stalkie_big_nohaplotig	exon	162723455	162724326	100	+	.	Parent=FBgn0010282.1.mrna1;Target=FBgn0010282.1 31 902 +
Chr2	stalkie_big_nohaplotig	exon	162724391	162724611	99	+	.	Parent=FBgn0010282.1.mrna1;Target=FBgn0010282.1 903 1123 +
Chr2	stalkie_big_nohaplotig	exon	162724996	162725275	100	+	.	Parent=FBgn0010282.1.mrna1;Target=FBgn0010282.1 1124 1403 +
Chr2	stalkie_big_nohaplotig	exon	162725410	162725614	100	+	.	Parent=FBgn0010282.1.mrna1;Target=FBgn0010282.1 1404 1608 +
Chr2	stalkie_big_nohaplotig	CDS	162723362	162723391	.	+	0	Parent=FBgn0010282.1.mrna1;Target=FBgn0010282.1 1 30 +
Chr2	stalkie_big_nohaplotig	CDS	162723455	162724326	.	+	0	Parent=FBgn0010282.1.mrna1;Target=FBgn0010282.1 31 902 +
Chr2	stalkie_big_nohaplotig	CDS	162724391	162724611	.	+	1	Parent=FBgn0010282.1.mrna1;Target=FBgn0010282.1 903 1123 +
Chr2	stalkie_big_nohaplotig	CDS	162724996	162725275	.	+	2	Parent=FBgn0010282.1.mrna1;Target=FBgn0010282.1 1124 1403 +
Chr2	stalkie_big_nohaplotig	CDS	162725410	162725614	.	+	1	Parent=FBgn0010282.1.mrna1;Target=FBgn0010282.1 1404 1608 +
Chr2	gffcl	locus	162739111	162740044	.	-	.	ID=RLOC_00023499;geneIDs=comp151346_c0_seq1.path2;transcripts=comp151346_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	162739111	162740044	.	-	.	ID=comp151346_c0_seq1.mrna2;geneID=comp151346_c0_seq1.path2;Name=comp151346_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=933;mismatches=1;indels=12;unknowns=0;Target=comp151346_c0_seq1 946 1 .;CDS_Target=comp151346_c0_seq1 237 133 .;locus=RLOC_00023499
Chr2	stalkie_big_nohaplotig	exon	162739111	162740044	98	-	.	Parent=comp151346_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	162739808	162739912	.	-	0	Parent=comp151346_c0_seq1.mrna2
Chr2	gffcl	locus	162740125	162790591	.	-	.	ID=RLOC_00023500;geneIDs=comp153956_c0_seq1.path1;transcripts=comp153956_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162740125	162790591	.	-	.	ID=comp153956_c0_seq1.mrna1;geneID=comp153956_c0_seq1.path1;Name=comp153956_c0_seq1;Dir=indeterminatecoverage=95.1;identity=97.0;matches=671;mismatches=14;indels=7;unknowns=0;Target=comp153956_c0_seq1 455 375 .;locus=RLOC_00023500
Chr2	stalkie_big_nohaplotig	exon	162740125	162740761	97	-	.	Parent=comp153956_c0_seq1.mrna1;Target=comp153956_c0_seq1 728 85 .
Chr2	stalkie_big_nohaplotig	exon	162752227	162752233	100	-	.	Parent=comp153956_c0_seq1.mrna1;Target=comp153956_c0_seq1 84 78 .
Chr2	stalkie_big_nohaplotig	exon	162758976	162758978	100	-	.	Parent=comp153956_c0_seq1.mrna1;Target=comp153956_c0_seq1 77 75 .
Chr2	stalkie_big_nohaplotig	exon	162766416	162766420	100	-	.	Parent=comp153956_c0_seq1.mrna1;Target=comp153956_c0_seq1 74 70 .
Chr2	stalkie_big_nohaplotig	exon	162773957	162773961	100	-	.	Parent=comp153956_c0_seq1.mrna1;Target=comp153956_c0_seq1 69 65 .
Chr2	stalkie_big_nohaplotig	exon	162780582	162780584	100	-	.	Parent=comp153956_c0_seq1.mrna1;Target=comp153956_c0_seq1 64 62 .
Chr2	stalkie_big_nohaplotig	exon	162787656	162787665	90	-	.	Parent=comp153956_c0_seq1.mrna1;Target=comp153956_c0_seq1 61 52 .
Chr2	stalkie_big_nohaplotig	exon	162790577	162790591	80	-	.	Parent=comp153956_c0_seq1.mrna1;Target=comp153956_c0_seq1 51 37 .
Chr2	stalkie_big_nohaplotig	CDS	162740393	162740473	.	-	0	Parent=comp153956_c0_seq1.mrna1
Chr2	gffcl	locus	162740879	162741562	.	+	.	ID=RLOC_00023501;geneIDs=comp143807_c0_seq1.path1;transcripts=comp143807_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162740879	162741562	.	+	.	ID=comp143807_c0_seq1.mrna1;geneID=comp143807_c0_seq1.path1;Name=comp143807_c0_seq1;Dir=indeterminatecoverage=97.0;identity=99.6;matches=681;mismatches=3;indels=0;unknowns=0;Target=comp143807_c0_seq1 705 22 .;CDS_Target=comp143807_c0_seq1 406 365 .;locus=RLOC_00023501
Chr2	stalkie_big_nohaplotig	exon	162740879	162741562	99	+	.	Parent=comp143807_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	162741222	162741263	.	+	0	Parent=comp143807_c0_seq1.mrna1
Chr2	gffcl	locus	162751074	162751992	.	-	.	ID=RLOC_00023502;geneIDs=comp156257_c1_seq1.path1;transcripts=comp156257_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162751074	162751992	.	-	.	ID=comp156257_c1_seq1.mrna1;geneID=comp156257_c1_seq1.path1;Name=comp156257_c1_seq1;Dir=indeterminatecoverage=97.5;identity=99.0;matches=910;mismatches=9;indels=0;unknowns=0;Target=comp156257_c1_seq1 943 25 .;CDS_Target=comp156257_c1_seq1 295 176 .;locus=RLOC_00023502
Chr2	stalkie_big_nohaplotig	exon	162751074	162751992	99	-	.	Parent=comp156257_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	162751722	162751841	.	-	0	Parent=comp156257_c1_seq1.mrna1
Chr2	gffcl	locus	162759758	162763372	.	-	.	ID=RLOC_00023503;geneIDs=FBgn0037918.1.path1;transcripts=FBgn0037918.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162759758	162763372	.	-	.	ID=FBgn0037918.1.mrna1;geneID=FBgn0037918.1.path1;Name=FBgn0037918.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=3612;mismatches=3;indels=0;unknowns=0;Target=FBgn0037918.1 3615 1 .;locus=RLOC_00023503
Chr2	stalkie_big_nohaplotig	exon	162759758	162763372	99	-	.	Parent=FBgn0037918.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	162759758	162763372	.	-	0	Parent=FBgn0037918.1.mrna1
Chr2	gffcl	locus	162766088	162767581	.	+	.	ID=RLOC_00023504;geneIDs=FBgn0037942.1.path1;transcripts=FBgn0037942.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162766088	162767581	.	+	.	ID=FBgn0037942.1.mrna1;geneID=FBgn0037942.1.path1;Name=FBgn0037942.1;Dir=sensecoverage=100.0;identity=99.2;matches=955;mismatches=8;indels=0;unknowns=0;locus=RLOC_00023504
Chr2	stalkie_big_nohaplotig	exon	162766088	162766177	97	+	.	Parent=FBgn0037942.1.mrna1;Target=FBgn0037942.1 1 90 +
Chr2	stalkie_big_nohaplotig	exon	162766522	162766780	98	+	.	Parent=FBgn0037942.1.mrna1;Target=FBgn0037942.1 91 349 +
Chr2	stalkie_big_nohaplotig	exon	162766841	162767076	99	+	.	Parent=FBgn0037942.1.mrna1;Target=FBgn0037942.1 350 585 +
Chr2	stalkie_big_nohaplotig	exon	162767134	162767389	100	+	.	Parent=FBgn0037942.1.mrna1;Target=FBgn0037942.1 586 841 +
Chr2	stalkie_big_nohaplotig	exon	162767460	162767581	100	+	.	Parent=FBgn0037942.1.mrna1;Target=FBgn0037942.1 842 963 +
Chr2	stalkie_big_nohaplotig	CDS	162766088	162766177	.	+	0	Parent=FBgn0037942.1.mrna1;Target=FBgn0037942.1 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	162766522	162766780	.	+	0	Parent=FBgn0037942.1.mrna1;Target=FBgn0037942.1 91 349 +
Chr2	stalkie_big_nohaplotig	CDS	162766841	162767076	.	+	2	Parent=FBgn0037942.1.mrna1;Target=FBgn0037942.1 350 585 +
Chr2	stalkie_big_nohaplotig	CDS	162767134	162767389	.	+	0	Parent=FBgn0037942.1.mrna1;Target=FBgn0037942.1 586 841 +
Chr2	stalkie_big_nohaplotig	CDS	162767460	162767581	.	+	2	Parent=FBgn0037942.1.mrna1;Target=FBgn0037942.1 842 963 +
Chr2	gffcl	locus	162767930	162773619	.	-	.	ID=RLOC_00023505;geneIDs=FBgn0002906.1.path1;transcripts=FBgn0002906.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162767930	162773619	.	-	.	ID=FBgn0002906.1.mrna1;geneID=FBgn0002906.1.path1;Name=FBgn0002906.1;Dir=sensecoverage=100.0;identity=99.9;matches=4534;mismatches=5;indels=0;unknowns=0;locus=RLOC_00023505
Chr2	stalkie_big_nohaplotig	exon	162767930	162767973	100	-	.	Parent=FBgn0002906.1.mrna1;Target=FBgn0002906.1 4496 4539 +
Chr2	stalkie_big_nohaplotig	exon	162768043	162768990	99	-	.	Parent=FBgn0002906.1.mrna1;Target=FBgn0002906.1 3548 4495 +
Chr2	stalkie_big_nohaplotig	exon	162769050	162769140	100	-	.	Parent=FBgn0002906.1.mrna1;Target=FBgn0002906.1 3457 3547 +
Chr2	stalkie_big_nohaplotig	exon	162769635	162769831	100	-	.	Parent=FBgn0002906.1.mrna1;Target=FBgn0002906.1 3260 3456 +
Chr2	stalkie_big_nohaplotig	exon	162769898	162770582	99	-	.	Parent=FBgn0002906.1.mrna1;Target=FBgn0002906.1 2575 3259 +
Chr2	stalkie_big_nohaplotig	exon	162770655	162770792	100	-	.	Parent=FBgn0002906.1.mrna1;Target=FBgn0002906.1 2437 2574 +
Chr2	stalkie_big_nohaplotig	exon	162770859	162771374	99	-	.	Parent=FBgn0002906.1.mrna1;Target=FBgn0002906.1 1921 2436 +
Chr2	stalkie_big_nohaplotig	exon	162771519	162772349	100	-	.	Parent=FBgn0002906.1.mrna1;Target=FBgn0002906.1 1090 1920 +
Chr2	stalkie_big_nohaplotig	exon	162772410	162773290	99	-	.	Parent=FBgn0002906.1.mrna1;Target=FBgn0002906.1 209 1089 +
Chr2	stalkie_big_nohaplotig	exon	162773352	162773444	100	-	.	Parent=FBgn0002906.1.mrna1;Target=FBgn0002906.1 116 208 +
Chr2	stalkie_big_nohaplotig	exon	162773505	162773619	100	-	.	Parent=FBgn0002906.1.mrna1;Target=FBgn0002906.1 1 115 +
Chr2	stalkie_big_nohaplotig	CDS	162767930	162767973	.	-	2	Parent=FBgn0002906.1.mrna1;Target=FBgn0002906.1 4496 4539 +
Chr2	stalkie_big_nohaplotig	CDS	162768043	162768990	.	-	2	Parent=FBgn0002906.1.mrna1;Target=FBgn0002906.1 3548 4495 +
Chr2	stalkie_big_nohaplotig	CDS	162769050	162769140	.	-	0	Parent=FBgn0002906.1.mrna1;Target=FBgn0002906.1 3457 3547 +
Chr2	stalkie_big_nohaplotig	CDS	162769635	162769831	.	-	2	Parent=FBgn0002906.1.mrna1;Target=FBgn0002906.1 3260 3456 +
Chr2	stalkie_big_nohaplotig	CDS	162769898	162770582	.	-	0	Parent=FBgn0002906.1.mrna1;Target=FBgn0002906.1 2575 3259 +
Chr2	stalkie_big_nohaplotig	CDS	162770655	162770792	.	-	0	Parent=FBgn0002906.1.mrna1;Target=FBgn0002906.1 2437 2574 +
Chr2	stalkie_big_nohaplotig	CDS	162770859	162771374	.	-	0	Parent=FBgn0002906.1.mrna1;Target=FBgn0002906.1 1921 2436 +
Chr2	stalkie_big_nohaplotig	CDS	162771519	162772349	.	-	0	Parent=FBgn0002906.1.mrna1;Target=FBgn0002906.1 1090 1920 +
Chr2	stalkie_big_nohaplotig	CDS	162772410	162773290	.	-	2	Parent=FBgn0002906.1.mrna1;Target=FBgn0002906.1 209 1089 +
Chr2	stalkie_big_nohaplotig	CDS	162773352	162773444	.	-	2	Parent=FBgn0002906.1.mrna1;Target=FBgn0002906.1 116 208 +
Chr2	stalkie_big_nohaplotig	CDS	162773505	162773619	.	-	0	Parent=FBgn0002906.1.mrna1;Target=FBgn0002906.1 1 115 +
Chr2	gffcl	locus	162776747	162777682	.	+	.	ID=RLOC_00023506;geneIDs=FBgn0026778.1.path1;transcripts=FBgn0026778.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162776747	162777682	.	+	.	ID=FBgn0026778.1.mrna1;geneID=FBgn0026778.1.path1;Name=FBgn0026778.1;Dir=sensecoverage=100.0;identity=100.0;matches=873;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023506
Chr2	stalkie_big_nohaplotig	exon	162776747	162776905	100	+	.	Parent=FBgn0026778.1.mrna1;Target=FBgn0026778.1 1 159 +
Chr2	stalkie_big_nohaplotig	exon	162776969	162777682	100	+	.	Parent=FBgn0026778.1.mrna1;Target=FBgn0026778.1 160 873 +
Chr2	stalkie_big_nohaplotig	CDS	162776747	162776905	.	+	0	Parent=FBgn0026778.1.mrna1;Target=FBgn0026778.1 1 159 +
Chr2	stalkie_big_nohaplotig	CDS	162776969	162777682	.	+	0	Parent=FBgn0026778.1.mrna1;Target=FBgn0026778.1 160 873 +
Chr2	gffcl	locus	162781375	162783469	.	+	.	ID=RLOC_00023507;geneIDs=FBgn0037943.1.path1;transcripts=FBgn0037943.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162781375	162783469	.	+	.	ID=FBgn0037943.1.mrna1;geneID=FBgn0037943.1.path1;Name=FBgn0037943.1;Dir=sensecoverage=100.0;identity=99.9;matches=1423;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023507
Chr2	stalkie_big_nohaplotig	exon	162781375	162781388	100	+	.	Parent=FBgn0037943.1.mrna1;Target=FBgn0037943.1 1 14 +
Chr2	stalkie_big_nohaplotig	exon	162781456	162782349	100	+	.	Parent=FBgn0037943.1.mrna1;Target=FBgn0037943.1 15 908 +
Chr2	stalkie_big_nohaplotig	exon	162782953	162783469	99	+	.	Parent=FBgn0037943.1.mrna1;Target=FBgn0037943.1 909 1425 +
Chr2	stalkie_big_nohaplotig	CDS	162781375	162781388	.	+	0	Parent=FBgn0037943.1.mrna1;Target=FBgn0037943.1 1 14 +
Chr2	stalkie_big_nohaplotig	CDS	162781456	162782349	.	+	1	Parent=FBgn0037943.1.mrna1;Target=FBgn0037943.1 15 908 +
Chr2	stalkie_big_nohaplotig	CDS	162782953	162783469	.	+	1	Parent=FBgn0037943.1.mrna1;Target=FBgn0037943.1 909 1425 +
Chr2	gffcl	locus	162785658	162787558	.	-	.	ID=RLOC_00023508;geneIDs=FBgn0037917.1.path1;transcripts=FBgn0037917.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162785658	162787558	.	-	.	ID=FBgn0037917.1.mrna1;geneID=FBgn0037917.1.path1;Name=FBgn0037917.1;Dir=sensecoverage=100.0;identity=100.0;matches=1095;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023508
Chr2	stalkie_big_nohaplotig	exon	162785658	162786177	100	-	.	Parent=FBgn0037917.1.mrna1;Target=FBgn0037917.1 576 1095 +
Chr2	stalkie_big_nohaplotig	exon	162786909	162787273	100	-	.	Parent=FBgn0037917.1.mrna1;Target=FBgn0037917.1 211 575 +
Chr2	stalkie_big_nohaplotig	exon	162787349	162787558	100	-	.	Parent=FBgn0037917.1.mrna1;Target=FBgn0037917.1 1 210 +
Chr2	stalkie_big_nohaplotig	CDS	162785658	162786177	.	-	1	Parent=FBgn0037917.1.mrna1;Target=FBgn0037917.1 576 1095 +
Chr2	stalkie_big_nohaplotig	CDS	162786909	162787273	.	-	0	Parent=FBgn0037917.1.mrna1;Target=FBgn0037917.1 211 575 +
Chr2	stalkie_big_nohaplotig	CDS	162787349	162787558	.	-	0	Parent=FBgn0037917.1.mrna1;Target=FBgn0037917.1 1 210 +
Chr2	gffcl	locus	162799199	162800837	.	+	.	ID=RLOC_00023510;geneIDs=FBgn0038742.1.path2;transcripts=FBgn0038742.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	162799199	162800837	.	+	.	ID=FBgn0038742.1.mrna2;geneID=FBgn0038742.1.path2;Name=FBgn0038742.1;Dir=sensecoverage=100.0;identity=99.9;matches=1271;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023510
Chr2	stalkie_big_nohaplotig	exon	162799199	162799277	100	+	.	Parent=FBgn0038742.1.mrna2;Target=FBgn0038742.1 1 79 +
Chr2	stalkie_big_nohaplotig	exon	162799593	162799811	99	+	.	Parent=FBgn0038742.1.mrna2;Target=FBgn0038742.1 80 298 +
Chr2	stalkie_big_nohaplotig	exon	162799864	162800837	100	+	.	Parent=FBgn0038742.1.mrna2;Target=FBgn0038742.1 299 1272 +
Chr2	stalkie_big_nohaplotig	CDS	162799199	162799277	.	+	0	Parent=FBgn0038742.1.mrna2;Target=FBgn0038742.1 1 79 +
Chr2	stalkie_big_nohaplotig	CDS	162799593	162799811	.	+	2	Parent=FBgn0038742.1.mrna2;Target=FBgn0038742.1 80 298 +
Chr2	stalkie_big_nohaplotig	CDS	162799864	162800837	.	+	2	Parent=FBgn0038742.1.mrna2;Target=FBgn0038742.1 299 1272 +
Chr2	gffcl	locus	162822124	162823657	.	+	.	ID=RLOC_00023512;geneIDs=FBgn0039494.1.path1;transcripts=FBgn0039494.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162822124	162823657	.	+	.	ID=FBgn0039494.1.mrna1;geneID=FBgn0039494.1.path1;Name=FBgn0039494.1;Dir=sensecoverage=100.0;identity=98.7;matches=1084;mismatches=12;indels=2;unknowns=0;Target=FBgn0039494.1 3 14 +;locus=RLOC_00023512
Chr2	stalkie_big_nohaplotig	exon	162822124	162822174	98	+	.	Parent=FBgn0039494.1.mrna1;Target=FBgn0039494.1 1 52 +
Chr2	stalkie_big_nohaplotig	exon	162822242	162822399	99	+	.	Parent=FBgn0039494.1.mrna1;Target=FBgn0039494.1 53 210 +
Chr2	stalkie_big_nohaplotig	exon	162822465	162822934	97	+	.	Parent=FBgn0039494.1.mrna1;Target=FBgn0039494.1 211 680 +
Chr2	stalkie_big_nohaplotig	exon	162823012	162823214	100	+	.	Parent=FBgn0039494.1.mrna1;Target=FBgn0039494.1 681 883 +
Chr2	stalkie_big_nohaplotig	exon	162823376	162823471	98	+	.	Parent=FBgn0039494.1.mrna1;Target=FBgn0039494.1 884 979 +
Chr2	stalkie_big_nohaplotig	exon	162823540	162823657	99	+	.	Parent=FBgn0039494.1.mrna1;Target=FBgn0039494.1 980 1098 +
Chr2	stalkie_big_nohaplotig	CDS	162822126	162822136	.	+	0	Parent=FBgn0039494.1.mrna1
Chr2	gffcl	locus	162826244	162828993	.	+	.	ID=RLOC_00023513;geneIDs=FBgn0039386.1.path1;transcripts=FBgn0039386.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162826244	162828993	.	+	.	ID=FBgn0039386.1.mrna1;geneID=FBgn0039386.1.path1;Name=FBgn0039386.1;Dir=sensecoverage=100.0;identity=98.8;matches=809;mismatches=10;indels=0;unknowns=0;locus=RLOC_00023513
Chr2	stalkie_big_nohaplotig	exon	162826244	162826564	99	+	.	Parent=FBgn0039386.1.mrna1;Target=FBgn0039386.1 1 321 +
Chr2	stalkie_big_nohaplotig	exon	162826785	162827003	100	+	.	Parent=FBgn0039386.1.mrna1;Target=FBgn0039386.1 322 540 +
Chr2	stalkie_big_nohaplotig	exon	162828715	162828993	97	+	.	Parent=FBgn0039386.1.mrna1;Target=FBgn0039386.1 541 819 +
Chr2	stalkie_big_nohaplotig	CDS	162826244	162826564	.	+	0	Parent=FBgn0039386.1.mrna1;Target=FBgn0039386.1 1 321 +
Chr2	stalkie_big_nohaplotig	CDS	162826785	162827003	.	+	0	Parent=FBgn0039386.1.mrna1;Target=FBgn0039386.1 322 540 +
Chr2	stalkie_big_nohaplotig	CDS	162828715	162828993	.	+	0	Parent=FBgn0039386.1.mrna1;Target=FBgn0039386.1 541 819 +
Chr2	gffcl	locus	162829329	162830669	.	-	.	ID=RLOC_00023514;geneIDs=FBgn0039385.1.path1;transcripts=FBgn0039385.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162829329	162830669	.	-	.	ID=FBgn0039385.1.mrna1;geneID=FBgn0039385.1.path1;Name=FBgn0039385.1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1339;mismatches=2;indels=0;unknowns=0;Target=FBgn0039385.1 1341 1 .;locus=RLOC_00023514
Chr2	stalkie_big_nohaplotig	exon	162829329	162830669	99	-	.	Parent=FBgn0039385.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	162829329	162830669	.	-	0	Parent=FBgn0039385.1.mrna1
Chr2	gffcl	locus	162840076	162840594	.	-	.	ID=RLOC_00023515;geneIDs=comp142680_c0_seq1.path1;transcripts=comp142680_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162840076	162840594	.	-	.	ID=comp142680_c0_seq1.mrna1;geneID=comp142680_c0_seq1.path1;Name=comp142680_c0_seq1;Dir=indeterminatecoverage=99.6;identity=96.3;matches=516;mismatches=3;indels=17;unknowns=0;Target=comp142680_c0_seq1 538 3 .;CDS_Target=comp142680_c0_seq1 68 3 .;locus=RLOC_00023515
Chr2	stalkie_big_nohaplotig	exon	162840076	162840594	96	-	.	Parent=comp142680_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	162840546	162840594	.	-	0	Parent=comp142680_c0_seq1.mrna1
Chr2	gffcl	locus	162840998	162847378	.	-	.	ID=RLOC_00023516;geneIDs=FBgn0028717.1.path1;transcripts=FBgn0028717.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162840998	162847378	.	-	.	ID=FBgn0028717.1.mrna1;geneID=FBgn0028717.1.path1;Name=FBgn0028717.1;Dir=sensecoverage=100.0;identity=99.7;matches=2076;mismatches=6;indels=0;unknowns=0;locus=RLOC_00023516
Chr2	stalkie_big_nohaplotig	exon	162840998	162841381	99	-	.	Parent=FBgn0028717.1.mrna1;Target=FBgn0028717.1 1699 2082 +
Chr2	stalkie_big_nohaplotig	exon	162841764	162842762	99	-	.	Parent=FBgn0028717.1.mrna1;Target=FBgn0028717.1 700 1698 +
Chr2	stalkie_big_nohaplotig	exon	162842858	162843073	100	-	.	Parent=FBgn0028717.1.mrna1;Target=FBgn0028717.1 484 699 +
Chr2	stalkie_big_nohaplotig	exon	162843192	162843305	100	-	.	Parent=FBgn0028717.1.mrna1;Target=FBgn0028717.1 370 483 +
Chr2	stalkie_big_nohaplotig	exon	162847010	162847378	99	-	.	Parent=FBgn0028717.1.mrna1;Target=FBgn0028717.1 1 369 +
Chr2	stalkie_big_nohaplotig	CDS	162840998	162841381	.	-	0	Parent=FBgn0028717.1.mrna1;Target=FBgn0028717.1 1699 2082 +
Chr2	stalkie_big_nohaplotig	CDS	162841764	162842762	.	-	0	Parent=FBgn0028717.1.mrna1;Target=FBgn0028717.1 700 1698 +
Chr2	stalkie_big_nohaplotig	CDS	162842858	162843073	.	-	0	Parent=FBgn0028717.1.mrna1;Target=FBgn0028717.1 484 699 +
Chr2	stalkie_big_nohaplotig	CDS	162843192	162843305	.	-	0	Parent=FBgn0028717.1.mrna1;Target=FBgn0028717.1 370 483 +
Chr2	stalkie_big_nohaplotig	CDS	162847010	162847378	.	-	0	Parent=FBgn0028717.1.mrna1;Target=FBgn0028717.1 1 369 +
Chr2	gffcl	locus	162847741	162848543	.	-	.	ID=RLOC_00023517;geneIDs=comp117458_c0_seq1.path1;transcripts=comp117458_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162847741	162848543	.	-	.	ID=comp117458_c0_seq1.mrna1;geneID=comp117458_c0_seq1.path1;Name=comp117458_c0_seq1;Dir=antisensecoverage=100.0;identity=99.6;matches=273;mismatches=1;indels=0;unknowns=0;Target=comp117458_c0_seq1 56 130 .;locus=RLOC_00023517
Chr2	stalkie_big_nohaplotig	exon	162847741	162847764	100	-	.	Parent=comp117458_c0_seq1.mrna1;Target=comp117458_c0_seq1 1 24 -
Chr2	stalkie_big_nohaplotig	exon	162847829	162848058	99	-	.	Parent=comp117458_c0_seq1.mrna1;Target=comp117458_c0_seq1 25 254 -
Chr2	stalkie_big_nohaplotig	exon	162848524	162848543	100	-	.	Parent=comp117458_c0_seq1.mrna1;Target=comp117458_c0_seq1 255 274 -
Chr2	stalkie_big_nohaplotig	CDS	162847860	162847934	.	-	0	Parent=comp117458_c0_seq1.mrna1
Chr2	gffcl	locus	162885795	162887578	.	+	.	ID=RLOC_00023519;geneIDs=FBgn0022981.1.path1;transcripts=FBgn0022981.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162885795	162887578	.	+	.	ID=FBgn0022981.1.mrna1;geneID=FBgn0022981.1.path1;Name=FBgn0022981.1;Dir=sensecoverage=100.0;identity=99.4;matches=1711;mismatches=11;indels=0;unknowns=0;locus=RLOC_00023519
Chr2	stalkie_big_nohaplotig	exon	162885795	162886197	99	+	.	Parent=FBgn0022981.1.mrna1;Target=FBgn0022981.1 1 403 +
Chr2	stalkie_big_nohaplotig	exon	162886260	162887578	99	+	.	Parent=FBgn0022981.1.mrna1;Target=FBgn0022981.1 404 1722 +
Chr2	stalkie_big_nohaplotig	CDS	162885795	162886197	.	+	0	Parent=FBgn0022981.1.mrna1;Target=FBgn0022981.1 1 403 +
Chr2	stalkie_big_nohaplotig	CDS	162886260	162887578	.	+	2	Parent=FBgn0022981.1.mrna1;Target=FBgn0022981.1 404 1722 +
Chr2	gffcl	locus	162890345	162891284	.	-	.	ID=RLOC_00023520;geneIDs=comp137384_c0_seq1.path1;transcripts=comp137384_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162890345	162891284	.	-	.	ID=comp137384_c0_seq1.mrna1;geneID=comp137384_c0_seq1.path1;Name=comp137384_c0_seq1;Dir=sensecoverage=89.5;identity=99.3;matches=432;mismatches=3;indels=0;unknowns=0;Target=comp137384_c0_seq1 51 185 +;locus=RLOC_00023520
Chr2	stalkie_big_nohaplotig	exon	162890345	162890489	100	-	.	Parent=comp137384_c0_seq1.mrna1;Target=comp137384_c0_seq1 341 485 +
Chr2	stalkie_big_nohaplotig	exon	162890739	162890777	92	-	.	Parent=comp137384_c0_seq1.mrna1;Target=comp137384_c0_seq1 302 340 +
Chr2	stalkie_big_nohaplotig	exon	162891034	162891284	100	-	.	Parent=comp137384_c0_seq1.mrna1;Target=comp137384_c0_seq1 51 301 +
Chr2	stalkie_big_nohaplotig	CDS	162891150	162891284	.	-	0	Parent=comp137384_c0_seq1.mrna1
Chr2	gffcl	locus	162892445	162892528	.	+	.	ID=RLOC_00023521;geneIDs=FBgn0087013.1.path1;transcripts=FBgn0087013.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162892445	162892528	.	+	.	ID=FBgn0087013.1.mrna1;geneID=FBgn0087013.1.path1;Name=FBgn0087013.1;Dir=indeterminatecoverage=2.5;identity=100.0;matches=84;mismatches=0;indels=0;unknowns=0;Target=FBgn0087013.1 84 1 .;locus=RLOC_00023521
Chr2	stalkie_big_nohaplotig	exon	162892445	162892528	100	+	.	Parent=FBgn0087013.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	162892445	162892528	.	+	0	Parent=FBgn0087013.1.mrna1
Chr2	gffcl	locus	162898689	162899399	.	+	.	ID=RLOC_00023522;geneIDs=Dp_FBgn0250603.path9;transcripts=Dp_FBgn0250603.mrna9
Chr2	stalkie_big_nohaplotig	mRNA	162898689	162899399	.	+	.	ID=Dp_FBgn0250603.mrna9;geneID=Dp_FBgn0250603.path9;Name=Dp_FBgn0250603;Dir=indeterminatecoverage=100.0;identity=98.5;matches=700;mismatches=11;indels=0;unknowns=0;Target=Dp_FBgn0250603 711 1 .;locus=RLOC_00023522
Chr2	stalkie_big_nohaplotig	exon	162898689	162899399	98	+	.	Parent=Dp_FBgn0250603.mrna9
Chr2	stalkie_big_nohaplotig	CDS	162898689	162899399	.	+	0	Parent=Dp_FBgn0250603.mrna9
Chr2	gffcl	locus	162928931	162930888	.	-	.	ID=RLOC_00023523;geneIDs=comp163816_c2_seq1.path1;transcripts=comp163816_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162928931	162930888	.	-	.	ID=comp163816_c2_seq1.mrna1;geneID=comp163816_c2_seq1.path1;Name=comp163816_c2_seq1;Dir=indeterminatecoverage=100.0;identity=96.5;matches=1816;mismatches=61;indels=5;unknowns=0;Target=comp163816_c2_seq1 1164 589 .;locus=RLOC_00023523
Chr2	stalkie_big_nohaplotig	exon	162928931	162929553	97	-	.	Parent=comp163816_c2_seq1.mrna1;Target=comp163816_c2_seq1 1877 1256 .
Chr2	stalkie_big_nohaplotig	exon	162929630	162930888	95	-	.	Parent=comp163816_c2_seq1.mrna1;Target=comp163816_c2_seq1 1255 1 .
Chr2	stalkie_big_nohaplotig	CDS	162929721	162930297	.	-	0	Parent=comp163816_c2_seq1.mrna1
Chr2	gffcl	locus	162960473	162962532	.	+	.	ID=RLOC_00023524;geneIDs=FBgn0011282.1.path1;transcripts=FBgn0011282.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162960473	162962532	.	+	.	ID=FBgn0011282.1.mrna1;geneID=FBgn0011282.1.path1;Name=FBgn0011282.1;Dir=sensecoverage=99.6;identity=100.0;matches=544;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023524
Chr2	stalkie_big_nohaplotig	exon	162960473	162960735	100	+	.	Parent=FBgn0011282.1.mrna1;Target=FBgn0011282.1 3 265 +
Chr2	stalkie_big_nohaplotig	exon	162960864	162960925	100	+	.	Parent=FBgn0011282.1.mrna1;Target=FBgn0011282.1 266 327 +
Chr2	stalkie_big_nohaplotig	exon	162961170	162961296	100	+	.	Parent=FBgn0011282.1.mrna1;Target=FBgn0011282.1 328 454 +
Chr2	stalkie_big_nohaplotig	exon	162962441	162962532	100	+	.	Parent=FBgn0011282.1.mrna1;Target=FBgn0011282.1 455 546 +
Chr2	stalkie_big_nohaplotig	CDS	162960474	162960735	.	+	0	Parent=FBgn0011282.1.mrna1;Target=FBgn0011282.1 4 265 +
Chr2	stalkie_big_nohaplotig	CDS	162960864	162960925	.	+	2	Parent=FBgn0011282.1.mrna1;Target=FBgn0011282.1 266 327 +
Chr2	stalkie_big_nohaplotig	CDS	162961170	162961296	.	+	0	Parent=FBgn0011282.1.mrna1;Target=FBgn0011282.1 328 454 +
Chr2	stalkie_big_nohaplotig	CDS	162962441	162962532	.	+	2	Parent=FBgn0011282.1.mrna1;Target=FBgn0011282.1 455 546 +
Chr2	gffcl	locus	162961731	162962232	.	-	.	ID=RLOC_00023525;geneIDs=comp146858_c0_seq1.path1;transcripts=comp146858_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162961731	162962232	.	-	.	ID=comp146858_c0_seq1.mrna1;geneID=comp146858_c0_seq1.path1;Name=comp146858_c0_seq1;Dir=indeterminatecoverage=99.6;identity=94.0;matches=472;mismatches=30;indels=0;unknowns=0;Target=comp146858_c0_seq1 502 1 .;CDS_Target=comp146858_c0_seq1 271 173 .;locus=RLOC_00023525
Chr2	stalkie_big_nohaplotig	exon	162961731	162962232	94	-	.	Parent=comp146858_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	162961962	162962060	.	-	0	Parent=comp146858_c0_seq1.mrna1
Chr2	gffcl	locus	162966794	162967711	.	-	.	ID=RLOC_00023526;geneIDs=FBgn0037492.1.path1;transcripts=FBgn0037492.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162966794	162967711	.	-	.	ID=FBgn0037492.1.mrna1;geneID=FBgn0037492.1.path1;Name=FBgn0037492.1;Dir=sensecoverage=100.0;identity=100.0;matches=855;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023526
Chr2	stalkie_big_nohaplotig	exon	162966794	162967523	100	-	.	Parent=FBgn0037492.1.mrna1;Target=FBgn0037492.1 126 855 +
Chr2	stalkie_big_nohaplotig	exon	162967587	162967711	100	-	.	Parent=FBgn0037492.1.mrna1;Target=FBgn0037492.1 1 125 +
Chr2	stalkie_big_nohaplotig	CDS	162966794	162967523	.	-	1	Parent=FBgn0037492.1.mrna1;Target=FBgn0037492.1 126 855 +
Chr2	stalkie_big_nohaplotig	CDS	162967587	162967711	.	-	0	Parent=FBgn0037492.1.mrna1;Target=FBgn0037492.1 1 125 +
Chr2	gffcl	locus	162969973	162971131	.	+	.	ID=RLOC_00023527;geneIDs=FBgn0037491.1.path1;transcripts=FBgn0037491.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162969973	162971131	.	+	.	ID=FBgn0037491.1.mrna1;geneID=FBgn0037491.1.path1;Name=FBgn0037491.1;Dir=sensecoverage=100.0;identity=99.9;matches=956;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023527
Chr2	stalkie_big_nohaplotig	exon	162969973	162970085	100	+	.	Parent=FBgn0037491.1.mrna1;Target=FBgn0037491.1 1 113 +
Chr2	stalkie_big_nohaplotig	exon	162970164	162970758	99	+	.	Parent=FBgn0037491.1.mrna1;Target=FBgn0037491.1 114 708 +
Chr2	stalkie_big_nohaplotig	exon	162970818	162970952	100	+	.	Parent=FBgn0037491.1.mrna1;Target=FBgn0037491.1 709 843 +
Chr2	stalkie_big_nohaplotig	exon	162971018	162971131	100	+	.	Parent=FBgn0037491.1.mrna1;Target=FBgn0037491.1 844 957 +
Chr2	stalkie_big_nohaplotig	CDS	162969973	162970085	.	+	0	Parent=FBgn0037491.1.mrna1;Target=FBgn0037491.1 1 113 +
Chr2	stalkie_big_nohaplotig	CDS	162970164	162970758	.	+	1	Parent=FBgn0037491.1.mrna1;Target=FBgn0037491.1 114 708 +
Chr2	stalkie_big_nohaplotig	CDS	162970818	162970952	.	+	0	Parent=FBgn0037491.1.mrna1;Target=FBgn0037491.1 709 843 +
Chr2	stalkie_big_nohaplotig	CDS	162971018	162971131	.	+	0	Parent=FBgn0037491.1.mrna1;Target=FBgn0037491.1 844 957 +
Chr2	gffcl	locus	162971317	162972268	.	-	.	ID=RLOC_00023528;geneIDs=FBgn0037490.1.path1;transcripts=FBgn0037490.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162971317	162972268	.	-	.	ID=FBgn0037490.1.mrna1;geneID=FBgn0037490.1.path1;Name=FBgn0037490.1;Dir=sensecoverage=100.0;identity=99.9;matches=830;mismatches=1;indels=0;unknowns=0;locus=RLOC_00023528
Chr2	stalkie_big_nohaplotig	exon	162971317	162971617	99	-	.	Parent=FBgn0037490.1.mrna1;Target=FBgn0037490.1 531 831 +
Chr2	stalkie_big_nohaplotig	exon	162971680	162972150	100	-	.	Parent=FBgn0037490.1.mrna1;Target=FBgn0037490.1 60 530 +
Chr2	stalkie_big_nohaplotig	exon	162972210	162972268	100	-	.	Parent=FBgn0037490.1.mrna1;Target=FBgn0037490.1 1 59 +
Chr2	stalkie_big_nohaplotig	CDS	162971317	162971617	.	-	1	Parent=FBgn0037490.1.mrna1;Target=FBgn0037490.1 531 831 +
Chr2	stalkie_big_nohaplotig	CDS	162971680	162972150	.	-	1	Parent=FBgn0037490.1.mrna1;Target=FBgn0037490.1 60 530 +
Chr2	stalkie_big_nohaplotig	CDS	162972210	162972268	.	-	0	Parent=FBgn0037490.1.mrna1;Target=FBgn0037490.1 1 59 +
Chr2	gffcl	locus	162972565	162994139	.	+	.	ID=RLOC_00023529;geneIDs=FBgn0037489.1.path1,comp149351_c0_seq1.path1;transcripts=FBgn0037489.1.mrna1,comp149351_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162972565	162975498	.	+	.	ID=FBgn0037489.1.mrna1;geneID=FBgn0037489.1.path1;Name=FBgn0037489.1;Dir=sensecoverage=100.0;identity=99.6;matches=2500;mismatches=6;indels=5;unknowns=0;locus=RLOC_00023529
Chr2	stalkie_big_nohaplotig	exon	162972565	162972619	91	+	.	Parent=FBgn0037489.1.mrna1;Target=FBgn0037489.1 1 60 +
Chr2	stalkie_big_nohaplotig	exon	162972673	162973579	99	+	.	Parent=FBgn0037489.1.mrna1;Target=FBgn0037489.1 61 967 +
Chr2	stalkie_big_nohaplotig	exon	162973638	162974337	99	+	.	Parent=FBgn0037489.1.mrna1;Target=FBgn0037489.1 968 1667 +
Chr2	stalkie_big_nohaplotig	exon	162974409	162975029	99	+	.	Parent=FBgn0037489.1.mrna1;Target=FBgn0037489.1 1668 2288 +
Chr2	stalkie_big_nohaplotig	exon	162975276	162975498	100	+	.	Parent=FBgn0037489.1.mrna1;Target=FBgn0037489.1 2289 2511 +
Chr2	stalkie_big_nohaplotig	CDS	162972566	162972619	.	+	0	Parent=FBgn0037489.1.mrna1;Target=FBgn0037489.1 2 60 +
Chr2	stalkie_big_nohaplotig	CDS	162972673	162972682	.	+	0	Parent=FBgn0037489.1.mrna1;Target=FBgn0037489.1 61 70 +
Chr2	stalkie_big_nohaplotig	mRNA	162973109	162994139	.	+	.	ID=comp149351_c0_seq1.mrna1;geneID=comp149351_c0_seq1.path1;Name=comp149351_c0_seq1;Dir=indeterminatecoverage=66.6;identity=77.2;matches=567;mismatches=74;indels=93;unknowns=0;Target=comp149351_c0_seq1 453 406 .;locus=RLOC_00023529
Chr2	stalkie_big_nohaplotig	exon	162973109	162973115	100	+	.	Parent=comp149351_c0_seq1.mrna1;Target=comp149351_c0_seq1 165 159 .
Chr2	stalkie_big_nohaplotig	exon	162973442	162973447	100	+	.	Parent=comp149351_c0_seq1.mrna1;Target=comp149351_c0_seq1 171 166 .
Chr2	stalkie_big_nohaplotig	exon	162975533	162975534	100	+	.	Parent=comp149351_c0_seq1.mrna1;Target=comp149351_c0_seq1 173 172 .
Chr2	stalkie_big_nohaplotig	exon	162975625	162975676	53	+	.	Parent=comp149351_c0_seq1.mrna1;Target=comp149351_c0_seq1 241 174 .
Chr2	stalkie_big_nohaplotig	exon	162982780	162982793	100	+	.	Parent=comp149351_c0_seq1.mrna1;Target=comp149351_c0_seq1 255 242 .
Chr2	stalkie_big_nohaplotig	exon	162982864	162982870	100	+	.	Parent=comp149351_c0_seq1.mrna1;Target=comp149351_c0_seq1 262 256 .
Chr2	stalkie_big_nohaplotig	exon	162986139	162986140	100	+	.	Parent=comp149351_c0_seq1.mrna1;Target=comp149351_c0_seq1 264 263 .
Chr2	stalkie_big_nohaplotig	exon	162993532	162994139	78	+	.	Parent=comp149351_c0_seq1.mrna1;Target=comp149351_c0_seq1 835 265 .
Chr2	stalkie_big_nohaplotig	CDS	162993682	162993731	.	+	0	Parent=comp149351_c0_seq1.mrna1
Chr2	gffcl	locus	162976967	162977454	.	-	.	ID=RLOC_00023530;geneIDs=comp46723_c0_seq1.path1;transcripts=comp46723_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162976967	162977454	.	-	.	ID=comp46723_c0_seq1.mrna1;geneID=comp46723_c0_seq1.path1;Name=comp46723_c0_seq1;Dir=antisensecoverage=69.5;identity=95.5;matches=422;mismatches=10;indels=10;unknowns=0;locus=RLOC_00023530
Chr2	stalkie_big_nohaplotig	exon	162976967	162977186	97	-	.	Parent=comp46723_c0_seq1.mrna1;Target=comp46723_c0_seq1 194 413 -
Chr2	stalkie_big_nohaplotig	exon	162977243	162977454	93	-	.	Parent=comp46723_c0_seq1.mrna1;Target=comp46723_c0_seq1 414 635 -
Chr2	stalkie_big_nohaplotig	CDS	162977078	162977186	.	-	1	Parent=comp46723_c0_seq1.mrna1;Target=comp46723_c0_seq1 305 413 .
Chr2	stalkie_big_nohaplotig	CDS	162977243	162977271	.	-	0	Parent=comp46723_c0_seq1.mrna1;Target=comp46723_c0_seq1 414 442 .
Chr2	gffcl	locus	162978096	162978231	.	-	.	ID=RLOC_00023531;geneIDs=comp117903_c0_seq1.path2;transcripts=comp117903_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	162978096	162978231	.	-	.	ID=comp117903_c0_seq1.mrna2;geneID=comp117903_c0_seq1.path2;Name=comp117903_c0_seq1;Dir=indeterminatecoverage=14.4;identity=91.4;matches=127;mismatches=9;indels=3;unknowns=0;Target=comp117903_c0_seq1 940 802 .;locus=RLOC_00023531
Chr2	stalkie_big_nohaplotig	exon	162978096	162978231	91	-	.	Parent=comp117903_c0_seq1.mrna2
Chr2	gffcl	locus	162978328	162980007	.	-	.	ID=RLOC_00023532;geneIDs=comp146580_c0_seq1.path1;transcripts=comp146580_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	162978328	162980007	.	-	.	ID=comp146580_c0_seq1.mrna1;geneID=comp146580_c0_seq1.path1;Name=comp146580_c0_seq1;Dir=indeterminatecoverage=100.0;identity=92.7;matches=1543;mismatches=57;indels=65;unknowns=0;Target=comp146580_c0_seq1 1130 1068 .;locus=RLOC_00023532
Chr2	stalkie_big_nohaplotig	exon	162978328	162978373	93	-	.	Parent=comp146580_c0_seq1.mrna1;Target=comp146580_c0_seq1 1647 1602 .
Chr2	stalkie_big_nohaplotig	exon	162978413	162980007	92	-	.	Parent=comp146580_c0_seq1.mrna1;Target=comp146580_c0_seq1 1578 1 .
Chr2	stalkie_big_nohaplotig	CDS	162978845	162978915	.	-	0	Parent=comp146580_c0_seq1.mrna1
Chr2	gffcl	locus	162988828	162989480	.	-	.	ID=RLOC_00023533;geneIDs=comp151283_c0_seq1.path2;transcripts=comp151283_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	162988828	162989480	.	-	.	ID=comp151283_c0_seq1.mrna2;geneID=comp151283_c0_seq1.path2;Name=comp151283_c0_seq1;Dir=antisensecoverage=100.0;identity=98.9;matches=557;mismatches=6;indels=0;unknowns=0;locus=RLOC_00023533
Chr2	stalkie_big_nohaplotig	exon	162988828	162989243	98	-	.	Parent=comp151283_c0_seq1.mrna2;Target=comp151283_c0_seq1 1 416 -
Chr2	stalkie_big_nohaplotig	exon	162989334	162989480	99	-	.	Parent=comp151283_c0_seq1.mrna2;Target=comp151283_c0_seq1 417 563 -
Chr2	stalkie_big_nohaplotig	CDS	162988914	162989243	.	-	0	Parent=comp151283_c0_seq1.mrna2;Target=comp151283_c0_seq1 87 416 .
Chr2	stalkie_big_nohaplotig	CDS	162989334	162989390	.	-	0	Parent=comp151283_c0_seq1.mrna2;Target=comp151283_c0_seq1 417 473 .
Chr2	gffcl	locus	163041694	163042428	.	-	.	ID=RLOC_00023534;geneIDs=FBgn0053483.3.path1;transcripts=FBgn0053483.3.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163041694	163042428	.	-	.	ID=FBgn0053483.3.mrna1;geneID=FBgn0053483.3.path1;Name=FBgn0053483.3;Dir=sensecoverage=100.0;identity=99.1;matches=541;mismatches=5;indels=0;unknowns=0;locus=RLOC_00023534
Chr2	stalkie_big_nohaplotig	exon	163041694	163041846	98	-	.	Parent=FBgn0053483.3.mrna1;Target=FBgn0053483.3 394 546 +
Chr2	stalkie_big_nohaplotig	exon	163041903	163042067	98	-	.	Parent=FBgn0053483.3.mrna1;Target=FBgn0053483.3 229 393 +
Chr2	stalkie_big_nohaplotig	exon	163042146	163042301	100	-	.	Parent=FBgn0053483.3.mrna1;Target=FBgn0053483.3 73 228 +
Chr2	stalkie_big_nohaplotig	exon	163042357	163042428	100	-	.	Parent=FBgn0053483.3.mrna1;Target=FBgn0053483.3 1 72 +
Chr2	stalkie_big_nohaplotig	CDS	163041694	163041846	.	-	0	Parent=FBgn0053483.3.mrna1;Target=FBgn0053483.3 394 546 +
Chr2	stalkie_big_nohaplotig	CDS	163041903	163042067	.	-	0	Parent=FBgn0053483.3.mrna1;Target=FBgn0053483.3 229 393 +
Chr2	stalkie_big_nohaplotig	CDS	163042146	163042301	.	-	0	Parent=FBgn0053483.3.mrna1;Target=FBgn0053483.3 73 228 +
Chr2	stalkie_big_nohaplotig	CDS	163042357	163042428	.	-	0	Parent=FBgn0053483.3.mrna1;Target=FBgn0053483.3 1 72 +
Chr2	gffcl	locus	163100746	163138662	.	+	.	ID=RLOC_00023535;geneIDs=comp161337_c2_seq1.path1;transcripts=comp161337_c2_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163100746	163138662	.	+	.	ID=comp161337_c2_seq1.mrna1;geneID=comp161337_c2_seq1.path1;Name=comp161337_c2_seq1;Dir=indeterminatecoverage=54.4;identity=100.0;matches=622;mismatches=0;indels=0;unknowns=0;Target=comp161337_c2_seq1 1421 1356 .;locus=RLOC_00023535
Chr2	stalkie_big_nohaplotig	exon	163100746	163100756	100	+	.	Parent=comp161337_c2_seq1.mrna1;Target=comp161337_c2_seq1 659 649 .
Chr2	stalkie_big_nohaplotig	exon	163114645	163114655	100	+	.	Parent=comp161337_c2_seq1.mrna1;Target=comp161337_c2_seq1 725 715 .
Chr2	stalkie_big_nohaplotig	exon	163121681	163121685	100	+	.	Parent=comp161337_c2_seq1.mrna1;Target=comp161337_c2_seq1 830 826 .
Chr2	stalkie_big_nohaplotig	exon	163127184	163127191	100	+	.	Parent=comp161337_c2_seq1.mrna1;Target=comp161337_c2_seq1 838 831 .
Chr2	stalkie_big_nohaplotig	exon	163129670	163129678	100	+	.	Parent=comp161337_c2_seq1.mrna1;Target=comp161337_c2_seq1 847 839 .
Chr2	stalkie_big_nohaplotig	exon	163132019	163132020	100	+	.	Parent=comp161337_c2_seq1.mrna1;Target=comp161337_c2_seq1 849 848 .
Chr2	stalkie_big_nohaplotig	exon	163138089	163138662	100	+	.	Parent=comp161337_c2_seq1.mrna1;Target=comp161337_c2_seq1 1423 850 .
Chr2	stalkie_big_nohaplotig	CDS	163138595	163138660	.	+	0	Parent=comp161337_c2_seq1.mrna1
Chr2	gffcl	locus	163142347	163152567	.	+	.	ID=RLOC_00023536;geneIDs=FBgn0003567.1.path1;transcripts=FBgn0003567.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163142347	163152567	.	+	.	ID=FBgn0003567.1.mrna1;geneID=FBgn0003567.1.path1;Name=FBgn0003567.1;Dir=sensecoverage=98.5;identity=99.6;matches=2092;mismatches=8;indels=0;unknowns=0;locus=RLOC_00023536
Chr2	stalkie_big_nohaplotig	exon	163142347	163142577	100	+	.	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 1 231 +
Chr2	stalkie_big_nohaplotig	exon	163142645	163142803	100	+	.	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 232 390 +
Chr2	stalkie_big_nohaplotig	exon	163143208	163143389	100	+	.	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 391 572 +
Chr2	stalkie_big_nohaplotig	exon	163143481	163143610	100	+	.	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 573 702 +
Chr2	stalkie_big_nohaplotig	exon	163143673	163143756	100	+	.	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 703 786 +
Chr2	stalkie_big_nohaplotig	exon	163143812	163143912	100	+	.	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 787 887 +
Chr2	stalkie_big_nohaplotig	exon	163143965	163144110	100	+	.	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 888 1033 +
Chr2	stalkie_big_nohaplotig	exon	163144536	163145253	100	+	.	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 1034 1751 +
Chr2	stalkie_big_nohaplotig	exon	163145310	163145442	100	+	.	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 1752 1884 +
Chr2	stalkie_big_nohaplotig	exon	163145510	163145593	100	+	.	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 1885 1968 +
Chr2	stalkie_big_nohaplotig	exon	163145655	163145706	100	+	.	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 1969 2020 +
Chr2	stalkie_big_nohaplotig	exon	163152392	163152423	90	+	.	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 2021 2052 +
Chr2	stalkie_big_nohaplotig	exon	163152520	163152567	89	+	.	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 2089 2136 +
Chr2	stalkie_big_nohaplotig	CDS	163142347	163142577	.	+	0	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 1 231 +
Chr2	stalkie_big_nohaplotig	CDS	163142645	163142803	.	+	0	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 232 390 +
Chr2	stalkie_big_nohaplotig	CDS	163143208	163143389	.	+	0	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 391 572 +
Chr2	stalkie_big_nohaplotig	CDS	163143481	163143610	.	+	1	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 573 702 +
Chr2	stalkie_big_nohaplotig	CDS	163143673	163143756	.	+	0	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 703 786 +
Chr2	stalkie_big_nohaplotig	CDS	163143812	163143912	.	+	0	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 787 887 +
Chr2	stalkie_big_nohaplotig	CDS	163143965	163144110	.	+	1	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 888 1033 +
Chr2	stalkie_big_nohaplotig	CDS	163144536	163145253	.	+	2	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 1034 1751 +
Chr2	stalkie_big_nohaplotig	CDS	163145310	163145442	.	+	1	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 1752 1884 +
Chr2	stalkie_big_nohaplotig	CDS	163145510	163145593	.	+	0	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 1885 1968 +
Chr2	stalkie_big_nohaplotig	CDS	163145655	163145706	.	+	0	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 1969 2020 +
Chr2	stalkie_big_nohaplotig	CDS	163152392	163152423	.	+	2	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 2021 2052 +
Chr2	stalkie_big_nohaplotig	CDS	163152520	163152567	.	+	0	Parent=FBgn0003567.1.mrna1;Target=FBgn0003567.1 2089 2136 +
Chr2	gffcl	locus	163231067	163231578	.	-	.	ID=RLOC_00023537;geneIDs=comp144934_c0_seq1.path1;transcripts=comp144934_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163231067	163231578	.	-	.	ID=comp144934_c0_seq1.mrna1;geneID=comp144934_c0_seq1.path1;Name=comp144934_c0_seq1;Dir=sensecoverage=99.0;identity=88.6;matches=406;mismatches=9;indels=43;unknowns=0;Target=comp144934_c0_seq1 2 58 +;locus=RLOC_00023537
Chr2	stalkie_big_nohaplotig	exon	163231067	163231271	74	-	.	Parent=comp144934_c0_seq1.mrna1;Target=comp144934_c0_seq1 254 415 +
Chr2	stalkie_big_nohaplotig	exon	163231326	163231578	100	-	.	Parent=comp144934_c0_seq1.mrna1;Target=comp144934_c0_seq1 1 253 +
Chr2	stalkie_big_nohaplotig	CDS	163231521	163231577	.	-	0	Parent=comp144934_c0_seq1.mrna1
Chr2	gffcl	locus	163290936	163292877	.	+	.	ID=RLOC_00023538;geneIDs=comp142631_c0_seq1.path1;transcripts=comp142631_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163290936	163292877	.	+	.	ID=comp142631_c0_seq1.mrna1;geneID=comp142631_c0_seq1.path1;Name=comp142631_c0_seq1;Dir=antisensecoverage=98.3;identity=96.9;matches=925;mismatches=7;indels=23;unknowns=0;locus=RLOC_00023538
Chr2	stalkie_big_nohaplotig	exon	163290936	163291136	88	+	.	Parent=comp142631_c0_seq1.mrna1;Target=comp142631_c0_seq1 749 972 -
Chr2	stalkie_big_nohaplotig	exon	163291204	163291362	100	+	.	Parent=comp142631_c0_seq1.mrna1;Target=comp142631_c0_seq1 590 748 -
Chr2	stalkie_big_nohaplotig	exon	163291428	163291586	99	+	.	Parent=comp142631_c0_seq1.mrna1;Target=comp142631_c0_seq1 431 589 -
Chr2	stalkie_big_nohaplotig	exon	163292402	163292584	100	+	.	Parent=comp142631_c0_seq1.mrna1;Target=comp142631_c0_seq1 248 430 -
Chr2	stalkie_big_nohaplotig	exon	163292648	163292877	98	+	.	Parent=comp142631_c0_seq1.mrna1;Target=comp142631_c0_seq1 18 247 -
Chr2	stalkie_big_nohaplotig	CDS	163291068	163291136	.	+	0	Parent=comp142631_c0_seq1.mrna1;Target=comp142631_c0_seq1 749 817 .
Chr2	stalkie_big_nohaplotig	CDS	163291204	163291362	.	+	0	Parent=comp142631_c0_seq1.mrna1;Target=comp142631_c0_seq1 590 748 .
Chr2	stalkie_big_nohaplotig	CDS	163291428	163291586	.	+	0	Parent=comp142631_c0_seq1.mrna1;Target=comp142631_c0_seq1 431 589 .
Chr2	stalkie_big_nohaplotig	CDS	163292402	163292584	.	+	0	Parent=comp142631_c0_seq1.mrna1;Target=comp142631_c0_seq1 248 430 .
Chr2	stalkie_big_nohaplotig	CDS	163292648	163292719	.	+	0	Parent=comp142631_c0_seq1.mrna1;Target=comp142631_c0_seq1 176 247 .
Chr2	gffcl	locus	163298030	163299105	.	-	.	ID=RLOC_00023539;geneIDs=comp150116_c0_seq1.path1;transcripts=comp150116_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163298030	163299105	.	-	.	ID=comp150116_c0_seq1.mrna1;geneID=comp150116_c0_seq1.path1;Name=comp150116_c0_seq1;Dir=indeterminatecoverage=97.4;identity=99.2;matches=1068;mismatches=5;indels=4;unknowns=0;Target=comp150116_c0_seq1 1088 15 .;CDS_Target=comp150116_c0_seq1 193 17 .;locus=RLOC_00023539
Chr2	stalkie_big_nohaplotig	exon	163298030	163299105	99	-	.	Parent=comp150116_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	163298927	163299103	.	-	0	Parent=comp150116_c0_seq1.mrna1
Chr2	gffcl	locus	163299587	163299861	.	-	.	ID=RLOC_00023540;geneIDs=comp144836_c0_seq1.path2;transcripts=comp144836_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	163299587	163299861	.	-	.	ID=comp144836_c0_seq1.mrna2;geneID=comp144836_c0_seq1.path2;Name=comp144836_c0_seq1;Dir=indeterminatecoverage=49.1;identity=98.6;matches=275;mismatches=0;indels=4;unknowns=0;Target=comp144836_c0_seq1 511 233 .;CDS_Target=comp144836_c0_seq1 506 441 .;locus=RLOC_00023540
Chr2	stalkie_big_nohaplotig	exon	163299587	163299861	98	-	.	Parent=comp144836_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	163299592	163299657	.	-	0	Parent=comp144836_c0_seq1.mrna2
Chr2	gffcl	locus	163301383	163301784	.	+	.	ID=RLOC_00023541;geneIDs=comp91696_c0_seq1.path1;transcripts=comp91696_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163301383	163301784	.	+	.	ID=comp91696_c0_seq1.mrna1;geneID=comp91696_c0_seq1.path1;Name=comp91696_c0_seq1;Dir=indeterminatecoverage=95.9;identity=100.0;matches=402;mismatches=0;indels=0;unknowns=0;Target=comp91696_c0_seq1 402 1 .;CDS_Target=comp91696_c0_seq1 210 67 .;locus=RLOC_00023541
Chr2	stalkie_big_nohaplotig	exon	163301383	163301784	100	+	.	Parent=comp91696_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	163301449	163301592	.	+	0	Parent=comp91696_c0_seq1.mrna1
Chr2	gffcl	locus	163302970	163303338	.	-	.	ID=RLOC_00023542;geneIDs=comp118546_c0_seq1.path2;transcripts=comp118546_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	163302970	163303338	.	-	.	ID=comp118546_c0_seq1.mrna2;geneID=comp118546_c0_seq1.path2;Name=comp118546_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=368;mismatches=1;indels=0;unknowns=0;Target=comp118546_c0_seq1 369 1 .;CDS_Target=comp118546_c0_seq1 36 1 .;locus=RLOC_00023542
Chr2	stalkie_big_nohaplotig	exon	163302970	163303338	99	-	.	Parent=comp118546_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	163303303	163303338	.	-	0	Parent=comp118546_c0_seq1.mrna2
Chr2	gffcl	locus	163306804	163310855	.	-	.	ID=RLOC_00023543;geneIDs=FBgn0037360.1.path1;transcripts=FBgn0037360.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163306804	163310855	.	-	.	ID=FBgn0037360.1.mrna1;geneID=FBgn0037360.1.path1;Name=FBgn0037360.1;Dir=sensecoverage=100.0;identity=99.6;matches=1961;mismatches=7;indels=0;unknowns=0;locus=RLOC_00023543
Chr2	stalkie_big_nohaplotig	exon	163306804	163306971	100	-	.	Parent=FBgn0037360.1.mrna1;Target=FBgn0037360.1 1801 1968 +
Chr2	stalkie_big_nohaplotig	exon	163308107	163309046	99	-	.	Parent=FBgn0037360.1.mrna1;Target=FBgn0037360.1 861 1800 +
Chr2	stalkie_big_nohaplotig	exon	163309106	163309284	100	-	.	Parent=FBgn0037360.1.mrna1;Target=FBgn0037360.1 682 860 +
Chr2	stalkie_big_nohaplotig	exon	163309343	163309912	99	-	.	Parent=FBgn0037360.1.mrna1;Target=FBgn0037360.1 112 681 +
Chr2	stalkie_big_nohaplotig	exon	163310745	163310855	100	-	.	Parent=FBgn0037360.1.mrna1;Target=FBgn0037360.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	163306804	163306971	.	-	0	Parent=FBgn0037360.1.mrna1;Target=FBgn0037360.1 1801 1968 +
Chr2	stalkie_big_nohaplotig	CDS	163308107	163309046	.	-	1	Parent=FBgn0037360.1.mrna1;Target=FBgn0037360.1 861 1800 +
Chr2	stalkie_big_nohaplotig	CDS	163309106	163309284	.	-	0	Parent=FBgn0037360.1.mrna1;Target=FBgn0037360.1 682 860 +
Chr2	stalkie_big_nohaplotig	CDS	163309343	163309912	.	-	0	Parent=FBgn0037360.1.mrna1;Target=FBgn0037360.1 112 681 +
Chr2	stalkie_big_nohaplotig	CDS	163310745	163310855	.	-	0	Parent=FBgn0037360.1.mrna1;Target=FBgn0037360.1 1 111 +
Chr2	gffcl	locus	163319620	163322230	.	-	.	ID=RLOC_00023545;geneIDs=FBgn0037359.1.path1;transcripts=FBgn0037359.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163319620	163322230	.	-	.	ID=FBgn0037359.1.mrna1;geneID=FBgn0037359.1.path1;Name=FBgn0037359.1;Dir=sensecoverage=100.0;identity=99.0;matches=906;mismatches=9;indels=0;unknowns=0;locus=RLOC_00023545
Chr2	stalkie_big_nohaplotig	exon	163319620	163319754	98	-	.	Parent=FBgn0037359.1.mrna1;Target=FBgn0037359.1 781 915 +
Chr2	stalkie_big_nohaplotig	exon	163319815	163320030	99	-	.	Parent=FBgn0037359.1.mrna1;Target=FBgn0037359.1 565 780 +
Chr2	stalkie_big_nohaplotig	exon	163321485	163321572	98	-	.	Parent=FBgn0037359.1.mrna1;Target=FBgn0037359.1 477 564 +
Chr2	stalkie_big_nohaplotig	exon	163321638	163321759	100	-	.	Parent=FBgn0037359.1.mrna1;Target=FBgn0037359.1 355 476 +
Chr2	stalkie_big_nohaplotig	exon	163321821	163321965	97	-	.	Parent=FBgn0037359.1.mrna1;Target=FBgn0037359.1 210 354 +
Chr2	stalkie_big_nohaplotig	exon	163322022	163322230	99	-	.	Parent=FBgn0037359.1.mrna1;Target=FBgn0037359.1 1 209 +
Chr2	stalkie_big_nohaplotig	CDS	163319620	163319754	.	-	0	Parent=FBgn0037359.1.mrna1;Target=FBgn0037359.1 781 915 +
Chr2	stalkie_big_nohaplotig	CDS	163319815	163320030	.	-	0	Parent=FBgn0037359.1.mrna1;Target=FBgn0037359.1 565 780 +
Chr2	stalkie_big_nohaplotig	CDS	163321485	163321572	.	-	1	Parent=FBgn0037359.1.mrna1;Target=FBgn0037359.1 477 564 +
Chr2	stalkie_big_nohaplotig	CDS	163321638	163321759	.	-	0	Parent=FBgn0037359.1.mrna1;Target=FBgn0037359.1 355 476 +
Chr2	stalkie_big_nohaplotig	CDS	163321821	163321965	.	-	1	Parent=FBgn0037359.1.mrna1;Target=FBgn0037359.1 210 354 +
Chr2	stalkie_big_nohaplotig	CDS	163322022	163322230	.	-	0	Parent=FBgn0037359.1.mrna1;Target=FBgn0037359.1 1 209 +
Chr2	gffcl	locus	163329589	163330755	.	+	.	ID=RLOC_00023546;geneIDs=FBgn0038621.1.path1;transcripts=FBgn0038621.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163329589	163330755	.	+	.	ID=FBgn0038621.1.mrna1;geneID=FBgn0038621.1.path1;Name=FBgn0038621.1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1167;mismatches=0;indels=0;unknowns=0;Target=FBgn0038621.1 1167 1 .;locus=RLOC_00023546
Chr2	stalkie_big_nohaplotig	exon	163329589	163330755	100	+	.	Parent=FBgn0038621.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	163329589	163330755	.	+	0	Parent=FBgn0038621.1.mrna1
Chr2	gffcl	locus	163330918	163335317	.	+	.	ID=RLOC_00023547;geneIDs=FBgn0051122.1.path1;transcripts=FBgn0051122.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163330918	163335317	.	+	.	ID=FBgn0051122.1.mrna1;geneID=FBgn0051122.1.path1;Name=FBgn0051122.1;Dir=sensecoverage=100.0;identity=100.0;matches=1593;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023547
Chr2	stalkie_big_nohaplotig	exon	163330918	163330989	100	+	.	Parent=FBgn0051122.1.mrna1;Target=FBgn0051122.1 1 72 +
Chr2	stalkie_big_nohaplotig	exon	163332096	163332335	100	+	.	Parent=FBgn0051122.1.mrna1;Target=FBgn0051122.1 73 312 +
Chr2	stalkie_big_nohaplotig	exon	163332390	163332517	100	+	.	Parent=FBgn0051122.1.mrna1;Target=FBgn0051122.1 313 440 +
Chr2	stalkie_big_nohaplotig	exon	163332616	163332720	100	+	.	Parent=FBgn0051122.1.mrna1;Target=FBgn0051122.1 441 545 +
Chr2	stalkie_big_nohaplotig	exon	163332784	163333327	100	+	.	Parent=FBgn0051122.1.mrna1;Target=FBgn0051122.1 546 1089 +
Chr2	stalkie_big_nohaplotig	exon	163334754	163334919	100	+	.	Parent=FBgn0051122.1.mrna1;Target=FBgn0051122.1 1090 1255 +
Chr2	stalkie_big_nohaplotig	exon	163334980	163335317	100	+	.	Parent=FBgn0051122.1.mrna1;Target=FBgn0051122.1 1256 1593 +
Chr2	stalkie_big_nohaplotig	CDS	163330918	163330989	.	+	0	Parent=FBgn0051122.1.mrna1;Target=FBgn0051122.1 1 72 +
Chr2	stalkie_big_nohaplotig	CDS	163332096	163332335	.	+	0	Parent=FBgn0051122.1.mrna1;Target=FBgn0051122.1 73 312 +
Chr2	stalkie_big_nohaplotig	CDS	163332390	163332517	.	+	0	Parent=FBgn0051122.1.mrna1;Target=FBgn0051122.1 313 440 +
Chr2	stalkie_big_nohaplotig	CDS	163332616	163332720	.	+	1	Parent=FBgn0051122.1.mrna1;Target=FBgn0051122.1 441 545 +
Chr2	stalkie_big_nohaplotig	CDS	163332784	163333327	.	+	1	Parent=FBgn0051122.1.mrna1;Target=FBgn0051122.1 546 1089 +
Chr2	stalkie_big_nohaplotig	CDS	163334754	163334919	.	+	0	Parent=FBgn0051122.1.mrna1;Target=FBgn0051122.1 1090 1255 +
Chr2	stalkie_big_nohaplotig	CDS	163334980	163335317	.	+	2	Parent=FBgn0051122.1.mrna1;Target=FBgn0051122.1 1256 1593 +
Chr2	gffcl	locus	163339345	163339552	.	+	.	ID=RLOC_00023548;geneIDs=comp160529_c2_seq1.path2;transcripts=comp160529_c2_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	163339345	163339552	.	+	.	ID=comp160529_c2_seq1.mrna2;geneID=comp160529_c2_seq1.path2;Name=comp160529_c2_seq1;Dir=indeterminatecoverage=7.4;identity=98.1;matches=208;mismatches=0;indels=4;unknowns=0;Target=comp160529_c2_seq1 2882 2671 .;locus=RLOC_00023548
Chr2	stalkie_big_nohaplotig	exon	163339345	163339552	98	+	.	Parent=comp160529_c2_seq1.mrna2
Chr2	gffcl	locus	163341963	163342677	.	-	.	ID=RLOC_00023549;geneIDs=FBgn0038619.1.path1;transcripts=FBgn0038619.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163341963	163342677	.	-	.	ID=FBgn0038619.1.mrna1;geneID=FBgn0038619.1.path1;Name=FBgn0038619.1;Dir=sensecoverage=100.0;identity=100.0;matches=660;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023549
Chr2	stalkie_big_nohaplotig	exon	163341963	163342275	100	-	.	Parent=FBgn0038619.1.mrna1;Target=FBgn0038619.1 348 660 +
Chr2	stalkie_big_nohaplotig	exon	163342331	163342677	100	-	.	Parent=FBgn0038619.1.mrna1;Target=FBgn0038619.1 1 347 +
Chr2	stalkie_big_nohaplotig	CDS	163341963	163342275	.	-	1	Parent=FBgn0038619.1.mrna1;Target=FBgn0038619.1 348 660 +
Chr2	stalkie_big_nohaplotig	CDS	163342331	163342677	.	-	0	Parent=FBgn0038619.1.mrna1;Target=FBgn0038619.1 1 347 +
Chr2	gffcl	locus	163363542	163363780	.	+	.	ID=RLOC_00023550;geneIDs=comp99325_c0_seq1.path1;transcripts=comp99325_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163363542	163363780	.	+	.	ID=comp99325_c0_seq1.mrna1;geneID=comp99325_c0_seq1.path1;Name=comp99325_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=238;mismatches=1;indels=0;unknowns=0;Target=comp99325_c0_seq1 239 1 .;CDS_Target=comp99325_c0_seq1 70 2 .;locus=RLOC_00023550
Chr2	stalkie_big_nohaplotig	exon	163363542	163363780	99	+	.	Parent=comp99325_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	163363543	163363611	.	+	0	Parent=comp99325_c0_seq1.mrna1
Chr2	gffcl	locus	163368033	163368562	.	-	.	ID=RLOC_00023551;geneIDs=comp149341_c0_seq1.path1;transcripts=comp149341_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163368033	163368562	.	-	.	ID=comp149341_c0_seq1.mrna1;geneID=comp149341_c0_seq1.path1;Name=comp149341_c0_seq1;Dir=indeterminatecoverage=99.4;identity=83.1;matches=457;mismatches=30;indels=63;unknowns=0;Target=comp149341_c0_seq1 507 1 .;CDS_Target=comp149341_c0_seq1 379 242 .;locus=RLOC_00023551
Chr2	stalkie_big_nohaplotig	exon	163368033	163368562	83	-	.	Parent=comp149341_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	163368196	163368332	.	-	0	Parent=comp149341_c0_seq1.mrna1
Chr2	gffcl	locus	163421862	163422046	.	-	.	ID=RLOC_00023553;geneIDs=FBgn0038654.1.path2;transcripts=FBgn0038654.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	163421862	163422046	.	-	.	ID=FBgn0038654.1.mrna2;geneID=FBgn0038654.1.path2;Name=FBgn0038654.1;Dir=indeterminatecoverage=62.9;identity=99.5;matches=184;mismatches=1;indels=0;unknowns=0;Target=FBgn0038654.1 294 110 .;locus=RLOC_00023553
Chr2	stalkie_big_nohaplotig	exon	163421862	163422046	99	-	.	Parent=FBgn0038654.1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	163421862	163422046	.	-	1	Parent=FBgn0038654.1.mrna2
Chr2	gffcl	locus	163458913	163460923	.	.	.	ID=RLOC_00023554;geneIDs=ORF791.path1,comp129365_c0_seq1.path1,comp160837_c0_seq1.path1;transcripts=comp160837_c0_seq1.mrna1,ORF791.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163458913	163460923	.	+	.	ID=comp160837_c0_seq1.mrna1;geneID=comp160837_c0_seq1.path1;Name=comp160837_c0_seq1;Dir=sensecoverage=99.7;identity=95.5;matches=1910;mismatches=30;indels=59;unknowns=0;locus=RLOC_00023554
Chr2	stalkie_big_nohaplotig	exon	163458913	163459090	97	+	.	Parent=comp160837_c0_seq1.mrna1;Target=comp160837_c0_seq1 7 184 +
Chr2	stalkie_big_nohaplotig	exon	163459161	163460923	95	+	.	Parent=comp160837_c0_seq1.mrna1;Target=comp160837_c0_seq1 185 2004 +
Chr2	stalkie_big_nohaplotig	CDS	163459013	163459090	.	+	0	Parent=comp160837_c0_seq1.mrna1;Target=comp160837_c0_seq1 107 184 +
Chr2	stalkie_big_nohaplotig	CDS	163459161	163459510	.	+	0	Parent=comp160837_c0_seq1.mrna1;Target=comp160837_c0_seq1 185 589 +
Chr2	stalkie_big_nohaplotig	mRNA	163458983	163460570	.	+	.	ID=ORF791.mrna1;geneID=ORF791.path1;Name=ORF791;Dir=sensecoverage=100.0;identity=97.8;matches=1397;mismatches=31;indels=0;unknowns=0;locus=RLOC_00023554
Chr2	stalkie_big_nohaplotig	exon	163458983	163459090	99	+	.	Parent=ORF791.mrna1;Target=ORF791 1 108 +
Chr2	stalkie_big_nohaplotig	exon	163459161	163459326	98	+	.	Parent=ORF791.mrna1;Target=ORF791 109 274 +
Chr2	stalkie_big_nohaplotig	exon	163459417	163460570	97	+	.	Parent=ORF791.mrna1;Target=ORF791 275 1428 +
Chr2	stalkie_big_nohaplotig	CDS	163458983	163459090	.	+	0	Parent=ORF791.mrna1;Target=ORF791 1 108 +
Chr2	stalkie_big_nohaplotig	CDS	163459161	163459326	.	+	0	Parent=ORF791.mrna1;Target=ORF791 109 274 +
Chr2	stalkie_big_nohaplotig	CDS	163459417	163460570	.	+	2	Parent=ORF791.mrna1;Target=ORF791 275 1428 +
Chr2	gffcl	locus	163526002	163526508	.	+	.	ID=RLOC_00023555;geneIDs=comp154958_c0_seq1.path1;transcripts=comp154958_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163526002	163526508	.	+	.	ID=comp154958_c0_seq1.mrna1;geneID=comp154958_c0_seq1.path1;Name=comp154958_c0_seq1;Dir=indeterminatecoverage=99.8;identity=93.3;matches=502;mismatches=5;indels=31;unknowns=0;Target=comp154958_c0_seq1 538 1 .;CDS_Target=comp154958_c0_seq1 271 182 .;locus=RLOC_00023555
Chr2	stalkie_big_nohaplotig	exon	163526002	163526508	93	+	.	Parent=comp154958_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	163526183	163526272	.	+	0	Parent=comp154958_c0_seq1.mrna1
Chr2	gffcl	locus	163526925	163527591	.	+	.	ID=RLOC_00023556;geneIDs=comp156783_c0_seq1.path1;transcripts=comp156783_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163526925	163527591	.	+	.	ID=comp156783_c0_seq1.mrna1;geneID=comp156783_c0_seq1.path1;Name=comp156783_c0_seq1;Dir=indeterminatecoverage=95.3;identity=98.2;matches=655;mismatches=12;indels=0;unknowns=0;Target=comp156783_c0_seq1 690 24 .;CDS_Target=comp156783_c0_seq1 105 25 .;locus=RLOC_00023556
Chr2	stalkie_big_nohaplotig	exon	163526925	163527591	98	+	.	Parent=comp156783_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	163526926	163527006	.	+	0	Parent=comp156783_c0_seq1.mrna1
Chr2	gffcl	locus	163528646	163529034	.	-	.	ID=RLOC_00023557;geneIDs=comp154346_c0_seq1.path1;transcripts=comp154346_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163528646	163529034	.	-	.	ID=comp154346_c0_seq1.mrna1;geneID=comp154346_c0_seq1.path1;Name=comp154346_c0_seq1;Dir=indeterminatecoverage=100.0;identity=88.7;matches=385;mismatches=4;indels=45;unknowns=0;Target=comp154346_c0_seq1 434 1 .;CDS_Target=comp154346_c0_seq1 224 81 .;locus=RLOC_00023557
Chr2	stalkie_big_nohaplotig	exon	163528646	163529034	88	-	.	Parent=comp154346_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	163528853	163528954	.	-	0	Parent=comp154346_c0_seq1.mrna1
Chr2	gffcl	locus	163588430	163588821	.	+	.	ID=RLOC_00023558;geneIDs=FBgn0262582.1.path1;transcripts=FBgn0262582.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163588430	163588821	.	+	.	ID=FBgn0262582.1.mrna1;geneID=FBgn0262582.1.path1;Name=FBgn0262582.1;Dir=indeterminatecoverage=6.0;identity=97.3;matches=390;mismatches=2;indels=9;unknowns=0;Target=FBgn0262582.1 401 1 .;locus=RLOC_00023558
Chr2	stalkie_big_nohaplotig	exon	163588430	163588821	97	+	.	Parent=FBgn0262582.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	163588430	163588821	.	+	0	Parent=FBgn0262582.1.mrna1
Chr2	gffcl	locus	163612331	163612629	.	+	.	ID=RLOC_00023560;geneIDs=comp149659_c0_seq1.path2;transcripts=comp149659_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	163612331	163612629	.	+	.	ID=comp149659_c0_seq1.mrna2;geneID=comp149659_c0_seq1.path2;Name=comp149659_c0_seq1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=299;mismatches=0;indels=0;unknowns=0;Target=comp149659_c0_seq1 299 1 .;CDS_Target=comp149659_c0_seq1 95 3 .;locus=RLOC_00023560
Chr2	stalkie_big_nohaplotig	exon	163612331	163612629	100	+	.	Parent=comp149659_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	163612333	163612425	.	+	0	Parent=comp149659_c0_seq1.mrna2
Chr2	gffcl	locus	163619634	163619999	.	+	.	ID=RLOC_00023562;geneIDs=FBgn0038426.1.path1;transcripts=FBgn0038426.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163619634	163619999	.	+	.	ID=FBgn0038426.1.mrna1;geneID=FBgn0038426.1.path1;Name=FBgn0038426.1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=363;mismatches=3;indels=0;unknowns=0;Target=FBgn0038426.1 366 1 .;locus=RLOC_00023562
Chr2	stalkie_big_nohaplotig	exon	163619634	163619999	99	+	.	Parent=FBgn0038426.1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	163619634	163619999	.	+	0	Parent=FBgn0038426.1.mrna1
Chr2	gffcl	locus	163620078	163621194	.	-	.	ID=RLOC_00023563;geneIDs=FBgn0038425.1.path1;transcripts=FBgn0038425.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163620078	163621194	.	-	.	ID=FBgn0038425.1.mrna1;geneID=FBgn0038425.1.path1;Name=FBgn0038425.1;Dir=sensecoverage=100.0;identity=99.1;matches=982;mismatches=8;indels=1;unknowns=0;locus=RLOC_00023563
Chr2	stalkie_big_nohaplotig	exon	163620078	163620776	98	-	.	Parent=FBgn0038425.1.mrna1;Target=FBgn0038425.1 293 990 +
Chr2	stalkie_big_nohaplotig	exon	163620838	163621005	100	-	.	Parent=FBgn0038425.1.mrna1;Target=FBgn0038425.1 125 292 +
Chr2	stalkie_big_nohaplotig	exon	163621071	163621194	99	-	.	Parent=FBgn0038425.1.mrna1;Target=FBgn0038425.1 1 124 +
Chr2	stalkie_big_nohaplotig	CDS	163620078	163620776	.	-	2	Parent=FBgn0038425.1.mrna1;Target=FBgn0038425.1 293 990 +
Chr2	stalkie_big_nohaplotig	CDS	163620838	163621005	.	-	2	Parent=FBgn0038425.1.mrna1;Target=FBgn0038425.1 125 292 +
Chr2	stalkie_big_nohaplotig	CDS	163621071	163621194	.	-	0	Parent=FBgn0038425.1.mrna1;Target=FBgn0038425.1 1 124 +
Chr2	gffcl	locus	163624397	163627077	.	.	.	ID=RLOC_00023564;geneIDs=FBgn0020910.1.path1,comp62963_c0_seq1.path1,comp120813_c0_seq1.path1,comp145342_c0_seq1.path1;transcripts=FBgn0020910.1.mrna1,comp145342_c0_seq1.mrna1,comp62963_c0_seq1.mrna1,comp120813_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163624397	163627077	.	+	.	ID=FBgn0020910.1.mrna1;geneID=FBgn0020910.1.path1;Name=FBgn0020910.1;Dir=sensecoverage=99.6;identity=99.6;matches=1241;mismatches=5;indels=0;unknowns=0;locus=RLOC_00023564
Chr2	stalkie_big_nohaplotig	exon	163624397	163624590	98	+	.	Parent=FBgn0020910.1.mrna1;Target=FBgn0020910.1 6 199 +
Chr2	stalkie_big_nohaplotig	exon	163624803	163624971	98	+	.	Parent=FBgn0020910.1.mrna1;Target=FBgn0020910.1 200 368 +
Chr2	stalkie_big_nohaplotig	exon	163625639	163625774	100	+	.	Parent=FBgn0020910.1.mrna1;Target=FBgn0020910.1 369 504 +
Chr2	stalkie_big_nohaplotig	exon	163626134	163626523	100	+	.	Parent=FBgn0020910.1.mrna1;Target=FBgn0020910.1 505 894 +
Chr2	stalkie_big_nohaplotig	exon	163626721	163627077	99	+	.	Parent=FBgn0020910.1.mrna1;Target=FBgn0020910.1 895 1251 +
Chr2	stalkie_big_nohaplotig	CDS	163624398	163624590	.	+	0	Parent=FBgn0020910.1.mrna1;Target=FBgn0020910.1 7 199 +
Chr2	stalkie_big_nohaplotig	CDS	163624803	163624971	.	+	2	Parent=FBgn0020910.1.mrna1;Target=FBgn0020910.1 200 368 +
Chr2	stalkie_big_nohaplotig	CDS	163625639	163625774	.	+	1	Parent=FBgn0020910.1.mrna1;Target=FBgn0020910.1 369 504 +
Chr2	stalkie_big_nohaplotig	CDS	163626134	163626523	.	+	0	Parent=FBgn0020910.1.mrna1;Target=FBgn0020910.1 505 894 +
Chr2	stalkie_big_nohaplotig	CDS	163626721	163627077	.	+	0	Parent=FBgn0020910.1.mrna1;Target=FBgn0020910.1 895 1251 +
Chr2	stalkie_big_nohaplotig	mRNA	163624948	163625637	.	+	.	ID=comp145342_c0_seq1.mrna1;geneID=comp145342_c0_seq1.path1;Name=comp145342_c0_seq1;Dir=sensecoverage=100.0;identity=99.8;matches=419;mismatches=1;indels=0;unknowns=0;Target=comp145342_c0_seq1 191 316 +;locus=RLOC_00023564
Chr2	stalkie_big_nohaplotig	exon	163624948	163624971	95	+	.	Parent=comp145342_c0_seq1.mrna1;Target=comp145342_c0_seq1 1 24 +
Chr2	stalkie_big_nohaplotig	exon	163625242	163625637	100	+	.	Parent=comp145342_c0_seq1.mrna1;Target=comp145342_c0_seq1 25 420 +
Chr2	stalkie_big_nohaplotig	CDS	163625408	163625533	.	+	0	Parent=comp145342_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163624952	163625241	.	+	.	ID=comp62963_c0_seq1.mrna1;geneID=comp62963_c0_seq1.path1;Name=comp62963_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=289;mismatches=1;indels=4;unknowns=0;Target=comp62963_c0_seq1 294 1 .;CDS_Target=comp62963_c0_seq1 46 2 .;locus=RLOC_00023564
Chr2	stalkie_big_nohaplotig	exon	163624952	163625241	98	+	.	Parent=comp62963_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	163624953	163624993	.	+	0	Parent=comp62963_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163625751	163626154	.	-	.	ID=comp120813_c0_seq1.mrna1;geneID=comp120813_c0_seq1.path1;Name=comp120813_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=400;mismatches=4;indels=0;unknowns=0;Target=comp120813_c0_seq1 404 1 .;CDS_Target=comp120813_c0_seq1 87 1 .;locus=RLOC_00023564
Chr2	stalkie_big_nohaplotig	exon	163625751	163626154	99	-	.	Parent=comp120813_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	163626068	163626154	.	-	0	Parent=comp120813_c0_seq1.mrna1
Chr2	gffcl	locus	163668364	163670115	.	+	.	ID=RLOC_00023565;geneIDs=Dp_FBgn0249247.9.path4;transcripts=Dp_FBgn0249247.9.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	163668364	163670115	.	+	.	ID=Dp_FBgn0249247.9.mrna4;geneID=Dp_FBgn0249247.9.path4;Name=Dp_FBgn0249247.9;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1749;mismatches=3;indels=0;unknowns=0;Target=Dp_FBgn0249247.9 1752 1 .;locus=RLOC_00023565
Chr2	stalkie_big_nohaplotig	exon	163668364	163670115	99	+	.	Parent=Dp_FBgn0249247.9.mrna4
Chr2	stalkie_big_nohaplotig	CDS	163668364	163670115	.	+	0	Parent=Dp_FBgn0249247.9.mrna4
Chr2	gffcl	locus	163731601	163732447	.	+	.	ID=RLOC_00023566;geneIDs=Dp_FBgn0243606.path3,comp163367_c4_seq1.path3;transcripts=comp163367_c4_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	163731601	163732447	.	+	.	ID=comp163367_c4_seq1.mrna3;geneID=comp163367_c4_seq1.path3;Name=comp163367_c4_seq1;Dir=indeterminatecoverage=99.9;identity=98.0;matches=830;mismatches=17;indels=0;unknowns=0;Target=comp163367_c4_seq1 847 1 .;CDS_Target=comp163367_c4_seq1 847 2 .;locus=RLOC_00023566
Chr2	stalkie_big_nohaplotig	exon	163731601	163732447	97	+	.	Parent=comp163367_c4_seq1.mrna3
Chr2	stalkie_big_nohaplotig	CDS	163731602	163732447	.	+	0	Parent=comp163367_c4_seq1.mrna3
Chr2	gffcl	locus	163780560	163782385	.	+	.	ID=RLOC_00023568;geneIDs=CPIJ017649.1.path1,comp160906_c0_seq1.path1;transcripts=comp160906_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163780560	163782385	.	+	.	ID=comp160906_c0_seq1.mrna1;geneID=comp160906_c0_seq1.path1;Name=comp160906_c0_seq1;Dir=sensecoverage=96.5;identity=98.3;matches=1670;mismatches=28;indels=1;unknowns=0;Target=comp160906_c0_seq1 3 71 +;locus=RLOC_00023568
Chr2	stalkie_big_nohaplotig	exon	163780560	163780859	98	+	.	Parent=comp160906_c0_seq1.mrna1;Target=comp160906_c0_seq1 1 301 +
Chr2	stalkie_big_nohaplotig	exon	163780928	163781757	98	+	.	Parent=comp160906_c0_seq1.mrna1;Target=comp160906_c0_seq1 302 1131 +
Chr2	stalkie_big_nohaplotig	exon	163781818	163782385	98	+	.	Parent=comp160906_c0_seq1.mrna1;Target=comp160906_c0_seq1 1132 1699 +
Chr2	stalkie_big_nohaplotig	CDS	163780562	163780629	.	+	0	Parent=comp160906_c0_seq1.mrna1
Chr2	gffcl	locus	163829834	163830718	.	+	.	ID=RLOC_00023570;geneIDs=comp160714_c3_seq1.path2;transcripts=comp160714_c3_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	163829834	163830718	.	+	.	ID=comp160714_c3_seq1.mrna2;geneID=comp160714_c3_seq1.path2;Name=comp160714_c3_seq1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=871;mismatches=13;indels=1;unknowns=0;Target=comp160714_c3_seq1 884 1 .;CDS_Target=comp160714_c3_seq1 573 433 .;locus=RLOC_00023570
Chr2	stalkie_big_nohaplotig	exon	163829834	163830718	98	+	.	Parent=comp160714_c3_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	163830266	163830406	.	+	0	Parent=comp160714_c3_seq1.mrna2
Chr2	gffcl	locus	163831417	163831483	.	-	.	ID=RLOC_00023571;geneIDs=FBgn0000146.2.path1;transcripts=FBgn0000146.2.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163831417	163831483	.	-	.	ID=FBgn0000146.2.mrna1;geneID=FBgn0000146.2.path1;Name=FBgn0000146.2;Dir=indeterminatecoverage=2.2;identity=100.0;matches=67;mismatches=0;indels=0;unknowns=0;Target=FBgn0000146.2 67 1 .;locus=RLOC_00023571
Chr2	stalkie_big_nohaplotig	exon	163831417	163831483	100	-	.	Parent=FBgn0000146.2.mrna1
Chr2	stalkie_big_nohaplotig	CDS	163831417	163831483	.	-	0	Parent=FBgn0000146.2.mrna1
Chr2	gffcl	locus	163868937	163870408	.	+	.	ID=RLOC_00023572;geneIDs=comp161959_c1_seq1.path4;transcripts=comp161959_c1_seq1.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	163868937	163870408	.	+	.	ID=comp161959_c1_seq1.mrna4;geneID=comp161959_c1_seq1.path4;Name=comp161959_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1465;mismatches=7;indels=0;unknowns=0;Target=comp161959_c1_seq1 1472 1 .;CDS_Target=comp161959_c1_seq1 1265 453 .;locus=RLOC_00023572
Chr2	stalkie_big_nohaplotig	exon	163868937	163870408	99	+	.	Parent=comp161959_c1_seq1.mrna4
Chr2	stalkie_big_nohaplotig	CDS	163869389	163870201	.	+	0	Parent=comp161959_c1_seq1.mrna4
Chr2	gffcl	locus	163886704	163944515	.	-	.	ID=RLOC_00023574;geneIDs=comp163077_c1_seq1.path2;transcripts=comp163077_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	163886704	163944515	.	-	.	ID=comp163077_c1_seq1.mrna2;geneID=comp163077_c1_seq1.path2;Name=comp163077_c1_seq1;Dir=indeterminatecoverage=97.8;identity=98.0;matches=4760;mismatches=78;indels=21;unknowns=0;Target=comp163077_c1_seq1 2398 1979 .;locus=RLOC_00023574
Chr2	stalkie_big_nohaplotig	exon	163886704	163891382	98	-	.	Parent=comp163077_c1_seq1.mrna2;Target=comp163077_c1_seq1 5054 374 .
Chr2	stalkie_big_nohaplotig	exon	163896213	163896223	100	-	.	Parent=comp163077_c1_seq1.mrna2;Target=comp163077_c1_seq1 373 363 .
Chr2	stalkie_big_nohaplotig	exon	163896361	163896435	60	-	.	Parent=comp163077_c1_seq1.mrna2;Target=comp163077_c1_seq1 362 293 .
Chr2	stalkie_big_nohaplotig	exon	163896905	163896907	100	-	.	Parent=comp163077_c1_seq1.mrna2;Target=comp163077_c1_seq1 292 290 .
Chr2	stalkie_big_nohaplotig	exon	163897164	163897166	100	-	.	Parent=comp163077_c1_seq1.mrna2;Target=comp163077_c1_seq1 289 287 .
Chr2	stalkie_big_nohaplotig	exon	163898875	163898877	100	-	.	Parent=comp163077_c1_seq1.mrna2;Target=comp163077_c1_seq1 286 284 .
Chr2	stalkie_big_nohaplotig	exon	163899568	163899577	100	-	.	Parent=comp163077_c1_seq1.mrna2;Target=comp163077_c1_seq1 283 274 .
Chr2	stalkie_big_nohaplotig	exon	163901054	163901062	100	-	.	Parent=comp163077_c1_seq1.mrna2;Target=comp163077_c1_seq1 239 231 .
Chr2	stalkie_big_nohaplotig	exon	163904252	163904258	100	-	.	Parent=comp163077_c1_seq1.mrna2;Target=comp163077_c1_seq1 230 224 .
Chr2	stalkie_big_nohaplotig	exon	163906654	163906658	100	-	.	Parent=comp163077_c1_seq1.mrna2;Target=comp163077_c1_seq1 223 219 .
Chr2	stalkie_big_nohaplotig	exon	163913900	163913914	80	-	.	Parent=comp163077_c1_seq1.mrna2;Target=comp163077_c1_seq1 218 204 .
Chr2	stalkie_big_nohaplotig	exon	163916538	163916539	100	-	.	Parent=comp163077_c1_seq1.mrna2;Target=comp163077_c1_seq1 203 202 .
Chr2	stalkie_big_nohaplotig	exon	163916984	163916994	100	-	.	Parent=comp163077_c1_seq1.mrna2;Target=comp163077_c1_seq1 201 191 .
Chr2	stalkie_big_nohaplotig	exon	163944097	163944101	100	-	.	Parent=comp163077_c1_seq1.mrna2;Target=comp163077_c1_seq1 190 186 .
Chr2	stalkie_big_nohaplotig	exon	163944507	163944515	100	-	.	Parent=comp163077_c1_seq1.mrna2;Target=comp163077_c1_seq1 122 114 .
Chr2	stalkie_big_nohaplotig	CDS	163889356	163889775	.	-	0	Parent=comp163077_c1_seq1.mrna2
Chr2	gffcl	locus	163901867	163902209	.	+	.	ID=RLOC_00023575;geneIDs=comp159671_c1_seq1.path2;transcripts=comp159671_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	163901867	163902209	.	+	.	ID=comp159671_c1_seq1.mrna2;geneID=comp159671_c1_seq1.path2;Name=comp159671_c1_seq1;Dir=indeterminatecoverage=49.3;identity=92.2;matches=317;mismatches=18;indels=9;unknowns=0;Target=comp159671_c1_seq1 585 250 .;CDS_Target=comp159671_c1_seq1 379 314 .;locus=RLOC_00023575
Chr2	stalkie_big_nohaplotig	exon	163901867	163902209	92	+	.	Parent=comp159671_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	163901931	163902004	.	+	0	Parent=comp159671_c1_seq1.mrna2
Chr2	gffcl	locus	163927540	163928591	.	-	.	ID=RLOC_00023576;geneIDs=comp134996_c0_seq1.path1;transcripts=comp134996_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	163927540	163928591	.	-	.	ID=comp134996_c0_seq1.mrna1;geneID=comp134996_c0_seq1.path1;Name=comp134996_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1050;mismatches=2;indels=0;unknowns=0;Target=comp134996_c0_seq1 1052 1 .;CDS_Target=comp134996_c0_seq1 209 3 .;locus=RLOC_00023576
Chr2	stalkie_big_nohaplotig	exon	163927540	163928591	99	-	.	Parent=comp134996_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	163928383	163928589	.	-	0	Parent=comp134996_c0_seq1.mrna1
Chr2	gffcl	locus	163939947	164138896	.	-	.	ID=RLOC_00023577;geneIDs=comp161953_c2_seq1.path2;transcripts=comp161953_c2_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	163939947	164138896	.	-	.	ID=comp161953_c2_seq1.mrna2;geneID=comp161953_c2_seq1.path2;Name=comp161953_c2_seq1;Dir=antisensecoverage=100.0;identity=95.9;matches=2487;mismatches=63;indels=43;unknowns=0;Target=comp161953_c2_seq1 1553 1627 .;locus=RLOC_00023577
Chr2	stalkie_big_nohaplotig	exon	163939947	163940365	94	-	.	Parent=comp161953_c2_seq1.mrna2;Target=comp161953_c2_seq1 1 403 -
Chr2	stalkie_big_nohaplotig	exon	164136747	164138896	96	-	.	Parent=comp161953_c2_seq1.mrna2;Target=comp161953_c2_seq1 404 2574 -
Chr2	stalkie_big_nohaplotig	CDS	164137895	164137963	.	-	0	Parent=comp161953_c2_seq1.mrna2
Chr2	gffcl	locus	163945684	163946943	.	+	.	ID=RLOC_00023578;geneIDs=FBgn0039711.2.path4;transcripts=FBgn0039711.2.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	163945684	163946943	.	+	.	ID=FBgn0039711.2.mrna4;geneID=FBgn0039711.2.path4;Name=FBgn0039711.2;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1258;mismatches=2;indels=0;unknowns=0;Target=FBgn0039711.2 1260 1 .;locus=RLOC_00023578
Chr2	stalkie_big_nohaplotig	exon	163945684	163946943	99	+	.	Parent=FBgn0039711.2.mrna4
Chr2	stalkie_big_nohaplotig	CDS	163945684	163946943	.	+	0	Parent=FBgn0039711.2.mrna4
Chr2	gffcl	locus	164204506	164204887	.	-	.	ID=RLOC_00023579;geneIDs=comp118142_c0_seq1.path1;transcripts=comp118142_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	164204506	164204887	.	-	.	ID=comp118142_c0_seq1.mrna1;geneID=comp118142_c0_seq1.path1;Name=comp118142_c0_seq1;Dir=sensecoverage=99.7;identity=99.7;matches=323;mismatches=1;indels=0;unknowns=0;Target=comp118142_c0_seq1 3 83 +;locus=RLOC_00023579
Chr2	stalkie_big_nohaplotig	exon	164204506	164204643	99	-	.	Parent=comp118142_c0_seq1.mrna1;Target=comp118142_c0_seq1 187 324 +
Chr2	stalkie_big_nohaplotig	exon	164204702	164204887	100	-	.	Parent=comp118142_c0_seq1.mrna1;Target=comp118142_c0_seq1 1 186 +
Chr2	stalkie_big_nohaplotig	CDS	164204805	164204885	.	-	0	Parent=comp118142_c0_seq1.mrna1
Chr2	gffcl	locus	164218591	164219071	.	-	.	ID=RLOC_00023580;geneIDs=comp156373_c1_seq1.path1;transcripts=comp156373_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	164218591	164219071	.	-	.	ID=comp156373_c1_seq1.mrna1;geneID=comp156373_c1_seq1.path1;Name=comp156373_c1_seq1;Dir=antisensecoverage=100.0;identity=98.3;matches=417;mismatches=4;indels=3;unknowns=0;Target=comp156373_c1_seq1 264 419 .;locus=RLOC_00023580
Chr2	stalkie_big_nohaplotig	exon	164218591	164218613	100	-	.	Parent=comp156373_c1_seq1.mrna1;Target=comp156373_c1_seq1 1 23 -
Chr2	stalkie_big_nohaplotig	exon	164218671	164219071	98	-	.	Parent=comp156373_c1_seq1.mrna1;Target=comp156373_c1_seq1 24 421 -
Chr2	stalkie_big_nohaplotig	CDS	164218914	164219069	.	-	0	Parent=comp156373_c1_seq1.mrna1
Chr2	gffcl	locus	164247599	164249052	.	+	.	ID=RLOC_00023581;geneIDs=comp157739_c3_seq1.path1;transcripts=comp157739_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	164247599	164249052	.	+	.	ID=comp157739_c3_seq1.mrna1;geneID=comp157739_c3_seq1.path1;Name=comp157739_c3_seq1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1446;mismatches=6;indels=6;unknowns=0;Target=comp157739_c3_seq1 1456 1 .;CDS_Target=comp157739_c3_seq1 895 692 .;locus=RLOC_00023581
Chr2	stalkie_big_nohaplotig	exon	164247599	164249052	99	+	.	Parent=comp157739_c3_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	164248288	164248491	.	+	0	Parent=comp157739_c3_seq1.mrna1
Chr2	gffcl	locus	164249668	164250074	.	+	.	ID=RLOC_00023582;geneIDs=comp147232_c0_seq1.path2;transcripts=comp147232_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	164249668	164250074	.	+	.	ID=comp147232_c0_seq1.mrna2;geneID=comp147232_c0_seq1.path2;Name=comp147232_c0_seq1;Dir=indeterminatecoverage=98.8;identity=99.8;matches=407;mismatches=0;indels=1;unknowns=0;Target=comp147232_c0_seq1 413 6 .;CDS_Target=comp147232_c0_seq1 279 136 .;locus=RLOC_00023582
Chr2	stalkie_big_nohaplotig	exon	164249668	164250074	99	+	.	Parent=comp147232_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	164249797	164249940	.	+	0	Parent=comp147232_c0_seq1.mrna2
Chr2	gffcl	locus	164276903	164278932	.	-	.	ID=RLOC_00023584;geneIDs=comp157624_c1_seq1.path2;transcripts=comp157624_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	164276903	164278932	.	-	.	ID=comp157624_c1_seq1.mrna2;geneID=comp157624_c1_seq1.path2;Name=comp157624_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2029;mismatches=1;indels=0;unknowns=0;Target=comp157624_c1_seq1 2031 2 .;CDS_Target=comp157624_c1_seq1 516 343 .;locus=RLOC_00023584
Chr2	stalkie_big_nohaplotig	exon	164276903	164278932	99	-	.	Parent=comp157624_c1_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	164278418	164278591	.	-	0	Parent=comp157624_c1_seq1.mrna2
Chr2	gffcl	locus	164281228	164358883	.	-	.	ID=RLOC_00023585;geneIDs=FBgn0053843.1.path1;transcripts=FBgn0053843.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	164281228	164358883	.	-	.	ID=FBgn0053843.1.mrna1;geneID=FBgn0053843.1.path1;Name=FBgn0053843.1;Dir=antisensecoverage=100.0;identity=99.5;matches=728;mismatches=4;indels=0;unknowns=0;locus=RLOC_00023585
Chr2	stalkie_big_nohaplotig	exon	164281228	164281759	99	-	.	Parent=FBgn0053843.1.mrna1;Target=FBgn0053843.1 1 532 -
Chr2	stalkie_big_nohaplotig	exon	164358684	164358883	99	-	.	Parent=FBgn0053843.1.mrna1;Target=FBgn0053843.1 533 732 -
Chr2	stalkie_big_nohaplotig	CDS	164281356	164281759	.	-	2	Parent=FBgn0053843.1.mrna1;Target=FBgn0053843.1 129 532 .
Chr2	stalkie_big_nohaplotig	CDS	164358684	164358882	.	-	0	Parent=FBgn0053843.1.mrna1;Target=FBgn0053843.1 533 731 .
Chr2	gffcl	locus	164301334	164301645	.	+	.	ID=RLOC_00023590;geneIDs=comp157677_c0_seq1.path4;transcripts=comp157677_c0_seq1.mrna4
Chr2	stalkie_big_nohaplotig	mRNA	164301334	164301645	.	+	.	ID=comp157677_c0_seq1.mrna4;geneID=comp157677_c0_seq1.path4;Name=comp157677_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=309;mismatches=3;indels=0;unknowns=0;Target=comp157677_c0_seq1 312 1 .;CDS_Target=comp157677_c0_seq1 91 2 .;locus=RLOC_00023590
Chr2	stalkie_big_nohaplotig	exon	164301334	164301645	99	+	.	Parent=comp157677_c0_seq1.mrna4
Chr2	stalkie_big_nohaplotig	CDS	164301335	164301424	.	+	0	Parent=comp157677_c0_seq1.mrna4
Chr2	gffcl	locus	164307542	164307853	.	+	.	ID=RLOC_00023591;geneIDs=comp157677_c0_seq1.path3;transcripts=comp157677_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	164307542	164307853	.	+	.	ID=comp157677_c0_seq1.mrna3;geneID=comp157677_c0_seq1.path3;Name=comp157677_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=310;mismatches=2;indels=0;unknowns=0;Target=comp157677_c0_seq1 312 1 .;CDS_Target=comp157677_c0_seq1 91 2 .;locus=RLOC_00023591
Chr2	stalkie_big_nohaplotig	exon	164307542	164307853	99	+	.	Parent=comp157677_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	CDS	164307543	164307632	.	+	0	Parent=comp157677_c0_seq1.mrna3
Chr2	gffcl	locus	164360899	164362344	.	-	.	ID=RLOC_00023592;geneIDs=FBgn0004915.1.path1;transcripts=FBgn0004915.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	164360899	164362344	.	-	.	ID=FBgn0004915.1.mrna1;geneID=FBgn0004915.1.path1;Name=FBgn0004915.1;Dir=sensecoverage=100.0;identity=100.0;matches=903;mismatches=0;indels=0;unknowns=0;locus=RLOC_00023592
Chr2	stalkie_big_nohaplotig	exon	164360899	164361024	100	-	.	Parent=FBgn0004915.1.mrna1;Target=FBgn0004915.1 778 903 +
Chr2	stalkie_big_nohaplotig	exon	164361090	164361211	100	-	.	Parent=FBgn0004915.1.mrna1;Target=FBgn0004915.1 656 777 +
Chr2	stalkie_big_nohaplotig	exon	164361279	164361510	100	-	.	Parent=FBgn0004915.1.mrna1;Target=FBgn0004915.1 424 655 +
Chr2	stalkie_big_nohaplotig	exon	164361833	164362211	100	-	.	Parent=FBgn0004915.1.mrna1;Target=FBgn0004915.1 45 423 +
Chr2	stalkie_big_nohaplotig	exon	164362301	164362344	100	-	.	Parent=FBgn0004915.1.mrna1;Target=FBgn0004915.1 1 44 +
Chr2	stalkie_big_nohaplotig	CDS	164360899	164361024	.	-	0	Parent=FBgn0004915.1.mrna1;Target=FBgn0004915.1 778 903 +
Chr2	stalkie_big_nohaplotig	CDS	164361090	164361211	.	-	2	Parent=FBgn0004915.1.mrna1;Target=FBgn0004915.1 656 777 +
Chr2	stalkie_big_nohaplotig	CDS	164361279	164361510	.	-	0	Parent=FBgn0004915.1.mrna1;Target=FBgn0004915.1 424 655 +
Chr2	stalkie_big_nohaplotig	CDS	164361833	164362211	.	-	1	Parent=FBgn0004915.1.mrna1;Target=FBgn0004915.1 45 423 +
Chr2	stalkie_big_nohaplotig	CDS	164362301	164362344	.	-	0	Parent=FBgn0004915.1.mrna1;Target=FBgn0004915.1 1 44 +
Chr2	gffcl	locus	164366789	164367652	.	-	.	ID=RLOC_00023593;geneIDs=CPIJ003423.path5;transcripts=CPIJ003423.mrna5
Chr2	stalkie_big_nohaplotig	mRNA	164366789	164367652	.	-	.	ID=CPIJ003423.mrna5;geneID=CPIJ003423.path5;Name=CPIJ003423;Dir=indeterminatecoverage=100.0;identity=99.9;matches=863;mismatches=1;indels=0;unknowns=0;Target=CPIJ003423 864 1 .;locus=RLOC_00023593
Chr2	stalkie_big_nohaplotig	exon	164366789	164367652	99	-	.	Parent=CPIJ003423.mrna5
Chr2	stalkie_big_nohaplotig	CDS	164366789	164367652	.	-	0	Parent=CPIJ003423.mrna5
Chr2	gffcl	locus	164417923	164418623	.	-	.	ID=RLOC_00023594;geneIDs=comp159940_c0_seq1.path1;transcripts=comp159940_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	164417923	164418623	.	-	.	ID=comp159940_c0_seq1.mrna1;geneID=comp159940_c0_seq1.path1;Name=comp159940_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=700;mismatches=1;indels=2;unknowns=0;Target=comp159940_c0_seq1 703 1 .;CDS_Target=comp159940_c0_seq1 299 192 .;locus=RLOC_00023594
Chr2	stalkie_big_nohaplotig	exon	164417923	164418623	99	-	.	Parent=comp159940_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	164418325	164418432	.	-	0	Parent=comp159940_c0_seq1.mrna1
Chr2	gffcl	locus	164420684	164421937	.	+	.	ID=RLOC_00023595;geneIDs=FBgn0039360.1.path2;transcripts=FBgn0039360.1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	164420684	164421937	.	+	.	ID=FBgn0039360.1.mrna2;geneID=FBgn0039360.1.path2;Name=FBgn0039360.1;Dir=sensecoverage=100.0;identity=99.5;matches=1039;mismatches=5;indels=0;unknowns=0;locus=RLOC_00023595
Chr2	stalkie_big_nohaplotig	exon	164420684	164421256	100	+	.	Parent=FBgn0039360.1.mrna2;Target=FBgn0039360.1 1 573 +
Chr2	stalkie_big_nohaplotig	exon	164421316	164421531	100	+	.	Parent=FBgn0039360.1.mrna2;Target=FBgn0039360.1 574 789 +
Chr2	stalkie_big_nohaplotig	exon	164421623	164421758	97	+	.	Parent=FBgn0039360.1.mrna2;Target=FBgn0039360.1 790 925 +
Chr2	stalkie_big_nohaplotig	exon	164421819	164421937	98	+	.	Parent=FBgn0039360.1.mrna2;Target=FBgn0039360.1 926 1044 +
Chr2	stalkie_big_nohaplotig	CDS	164420684	164421256	.	+	0	Parent=FBgn0039360.1.mrna2;Target=FBgn0039360.1 1 573 +
Chr2	stalkie_big_nohaplotig	CDS	164421316	164421531	.	+	0	Parent=FBgn0039360.1.mrna2;Target=FBgn0039360.1 574 789 +
Chr2	stalkie_big_nohaplotig	CDS	164421623	164421758	.	+	0	Parent=FBgn0039360.1.mrna2;Target=FBgn0039360.1 790 925 +
Chr2	stalkie_big_nohaplotig	CDS	164421819	164421937	.	+	2	Parent=FBgn0039360.1.mrna2;Target=FBgn0039360.1 926 1044 +
Chr2	gffcl	locus	164434564	164434967	.	-	.	ID=RLOC_00023596;geneIDs=comp149553_c0_seq1.path5;transcripts=comp149553_c0_seq1.mrna5
Chr2	stalkie_big_nohaplotig	mRNA	164434564	164434967	.	-	.	ID=comp149553_c0_seq1.mrna5;geneID=comp149553_c0_seq1.path5;Name=comp149553_c0_seq1;Dir=indeterminatecoverage=89.8;identity=100.0;matches=404;mismatches=0;indels=0;unknowns=0;Target=comp149553_c0_seq1 404 1 .;CDS_Target=comp149553_c0_seq1 384 298 .;locus=RLOC_00023596
Chr2	stalkie_big_nohaplotig	exon	164434564	164434967	100	-	.	Parent=comp149553_c0_seq1.mrna5
Chr2	stalkie_big_nohaplotig	CDS	164434584	164434670	.	-	0	Parent=comp149553_c0_seq1.mrna5
Chr2	gffcl	locus	164435110	164436555	.	+	.	ID=RLOC_00023597;geneIDs=FBgn0039711.3.path6;transcripts=FBgn0039711.3.mrna6
Chr2	stalkie_big_nohaplotig	mRNA	164435110	164436555	.	+	.	ID=FBgn0039711.3.mrna6;geneID=FBgn0039711.3.path6;Name=FBgn0039711.3;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1443;mismatches=3;indels=0;unknowns=0;Target=FBgn0039711.3 1446 1 .;locus=RLOC_00023597
Chr2	stalkie_big_nohaplotig	exon	164435110	164436555	99	+	.	Parent=FBgn0039711.3.mrna6
Chr2	stalkie_big_nohaplotig	CDS	164435110	164436555	.	+	0	Parent=FBgn0039711.3.mrna6
Chr2	gffcl	locus	164465070	164466121	.	-	.	ID=RLOC_00023598;geneIDs=comp134996_c0_seq1.path2;transcripts=comp134996_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	164465070	164466121	.	-	.	ID=comp134996_c0_seq1.mrna2;geneID=comp134996_c0_seq1.path2;Name=comp134996_c0_seq1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1048;mismatches=4;indels=0;unknowns=0;Target=comp134996_c0_seq1 1052 1 .;CDS_Target=comp134996_c0_seq1 209 3 .;locus=RLOC_00023598
Chr2	stalkie_big_nohaplotig	exon	164465070	164466121	99	-	.	Parent=comp134996_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	CDS	164465913	164466119	.	-	0	Parent=comp134996_c0_seq1.mrna2
Chr2	gffcl	locus	164543534	164547765	.	-	.	ID=RLOC_00023599;geneIDs=comp134996_c0_seq1.path3;transcripts=comp134996_c0_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	164543534	164547765	.	-	.	ID=comp134996_c0_seq1.mrna3;geneID=comp134996_c0_seq1.path3;Name=comp134996_c0_seq1;Dir=sensecoverage=100.0;identity=99.6;matches=1048;mismatches=4;indels=0;unknowns=0;locus=RLOC_00023599
Chr2	stalkie_big_nohaplotig	exon	164543534	164544495	99	-	.	Parent=comp134996_c0_seq1.mrna3;Target=comp134996_c0_seq1 91 1052 +
Chr2	stalkie_big_nohaplotig	exon	164547676	164547765	100	-	.	Parent=comp134996_c0_seq1.mrna3;Target=comp134996_c0_seq1 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	164544377	164544495	.	-	2	Parent=comp134996_c0_seq1.mrna3;Target=comp134996_c0_seq1 91 209 +
Chr2	stalkie_big_nohaplotig	CDS	164547676	164547763	.	-	0	Parent=comp134996_c0_seq1.mrna3;Target=comp134996_c0_seq1 3 90 +
Chr2	gffcl	locus	164593626	164593960	.	-	.	ID=RLOC_00023600;geneIDs=comp161586_c4_seq1.path1;transcripts=comp161586_c4_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	164593626	164593960	.	-	.	ID=comp161586_c4_seq1.mrna1;geneID=comp161586_c4_seq1.path1;Name=comp161586_c4_seq1;Dir=indeterminatecoverage=9.5;identity=96.1;matches=324;mismatches=11;indels=2;unknowns=0;Target=comp161586_c4_seq1 337 1 .;locus=RLOC_00023600
Chr2	stalkie_big_nohaplotig	exon	164593626	164593960	96	-	.	Parent=comp161586_c4_seq1.mrna1
Chr2	gffcl	locus	164599060	164600531	.	+	.	ID=RLOC_00023601;geneIDs=comp161959_c1_seq1.path3;transcripts=comp161959_c1_seq1.mrna3
Chr2	stalkie_big_nohaplotig	mRNA	164599060	164600531	.	+	.	ID=comp161959_c1_seq1.mrna3;geneID=comp161959_c1_seq1.path3;Name=comp161959_c1_seq1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1467;mismatches=5;indels=0;unknowns=0;Target=comp161959_c1_seq1 1472 1 .;CDS_Target=comp161959_c1_seq1 1265 453 .;locus=RLOC_00023601
Chr2	stalkie_big_nohaplotig	exon	164599060	164600531	99	+	.	Parent=comp161959_c1_seq1.mrna3
Chr2	stalkie_big_nohaplotig	CDS	164599512	164600324	.	+	0	Parent=comp161959_c1_seq1.mrna3
Chr2	gffcl	locus	164651261	164651585	.	-	.	ID=RLOC_00023604;geneIDs=comp153889_c0_seq1.path1;transcripts=comp153889_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	164651261	164651585	.	-	.	ID=comp153889_c0_seq1.mrna1;geneID=comp153889_c0_seq1.path1;Name=comp153889_c0_seq1;Dir=indeterminatecoverage=100.0;identity=98.2;matches=319;mismatches=6;indels=0;unknowns=0;Target=comp153889_c0_seq1 325 1 .;CDS_Target=comp153889_c0_seq1 153 1 .;locus=RLOC_00023604
Chr2	stalkie_big_nohaplotig	exon	164651261	164651585	98	-	.	Parent=comp153889_c0_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	164651433	164651585	.	-	0	Parent=comp153889_c0_seq1.mrna1
Chr2	gffcl	locus	164709413	164709895	.	+	.	ID=RLOC_00023606;geneIDs=FBgn0029975.1.path1;transcripts=FBgn0029975.1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	164709413	164709895	.	+	.	ID=FBgn0029975.1.mrna1;geneID=FBgn0029975.1.path1;Name=FBgn0029975.1;Dir=sensecoverage=26.0;identity=99.2;matches=262;mismatches=2;indels=0;unknowns=0;locus=RLOC_00023606
Chr2	stalkie_big_nohaplotig	exon	164709413	164709629	99	+	.	Parent=FBgn0029975.1.mrna1;Target=FBgn0029975.1 1 217 +
Chr2	stalkie_big_nohaplotig	exon	164709849	164709895	100	+	.	Parent=FBgn0029975.1.mrna1;Target=FBgn0029975.1 218 264 +
Chr2	stalkie_big_nohaplotig	CDS	164709413	164709629	.	+	0	Parent=FBgn0029975.1.mrna1;Target=FBgn0029975.1 1 217 +
Chr2	stalkie_big_nohaplotig	CDS	164709849	164709895	.	+	2	Parent=FBgn0029975.1.mrna1;Target=FBgn0029975.1 218 264 +
Chr2	gffcl	locus	164714778	164715444	.	-	.	ID=RLOC_00023607;geneIDs=comp138239_c1_seq1.path1;transcripts=comp138239_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	mRNA	164714778	164715444	.	-	.	ID=comp138239_c1_seq1.mrna1;geneID=comp138239_c1_seq1.path1;Name=comp138239_c1_seq1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=667;mismatches=0;indels=0;unknowns=0;Target=comp138239_c1_seq1 667 1 .;CDS_Target=comp138239_c1_seq1 150 37 .;locus=RLOC_00023607
Chr2	stalkie_big_nohaplotig	exon	164714778	164715444	100	-	.	Parent=comp138239_c1_seq1.mrna1
Chr2	stalkie_big_nohaplotig	CDS	164715295	164715408	.	-	0	Parent=comp138239_c1_seq1.mrna1
Chr2	gffcl	locus	164805299	164806961	.	+	.	ID=RLOC_00023608;geneIDs=comp71708_c0_seq1.path2;transcripts=comp71708_c0_seq1.mrna2
Chr2	stalkie_big_nohaplotig	mRNA	164805299	164806961	.	+	.	ID=comp71708_c0_seq1.mrna2;geneID=comp71708_c0_seq1.path2;Name=comp71708_c0_seq1;Dir=sensecoverage=97.6;identity=99.9;matches=836;mismatches=1;indels=0;unknowns=0;Target=comp71708_c0_seq1 478 612 +;locus=RLOC_00023608
Chr2	stalkie_big_nohaplotig	exon	164805299	164805582	99	+	.	Parent=comp71708_c0_seq1.mrna2;Target=comp71708_c0_seq1 1 284 +
Chr2	stalkie_big_nohaplotig	exon	164806409	164806961	100	+	.	Parent=comp71708_c0_seq1.mrna2;Target=comp71708_c0_seq1 285 837 +
Chr2	stalkie_big_nohaplotig	CDS	164806602	164806736	.	+	0	Parent=comp71708_c0_seq1.mrna2
ChrX	stalkie_big_nohaplotig	mRNA	72673511	72690031	.	+	.	ID=FBgn0041713.1.mrna1;Name=FBgn0041713.1;Parent=FBgn0041713.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1344;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	72673511	72673776	100	+	.	ID=FBgn0041713.1.mrna1.exon1;Name=FBgn0041713.1;Parent=FBgn0041713.1.mrna1;Target=FBgn0041713.1 1 266 +
ChrX	stalkie_big_nohaplotig	exon	72688880	72689282	100	+	.	ID=FBgn0041713.1.mrna1.exon2;Name=FBgn0041713.1;Parent=FBgn0041713.1.mrna1;Target=FBgn0041713.1 267 669 +
ChrX	stalkie_big_nohaplotig	exon	72689357	72690031	100	+	.	ID=FBgn0041713.1.mrna1.exon3;Name=FBgn0041713.1;Parent=FBgn0041713.1.mrna1;Target=FBgn0041713.1 670 1344 +
ChrX	stalkie_big_nohaplotig	CDS	72673511	72673776	100	+	0	ID=FBgn0041713.1.mrna1.cds1;Name=FBgn0041713.1;Parent=FBgn0041713.1.mrna1;Target=FBgn0041713.1 1 266 +
ChrX	stalkie_big_nohaplotig	CDS	72688880	72689282	100	+	2	ID=FBgn0041713.1.mrna1.cds2;Name=FBgn0041713.1;Parent=FBgn0041713.1.mrna1;Target=FBgn0041713.1 267 669 +
ChrX	stalkie_big_nohaplotig	CDS	72689357	72690031	100	+	0	ID=FBgn0041713.1.mrna1.cds3;Name=FBgn0041713.1;Parent=FBgn0041713.1.mrna1;Target=FBgn0041713.1 670 1344 +
ChrX	stalkie_big_nohaplotig	mRNA	73689943	73691093	.	+	.	ID=ORF1300.mrna1;Name=ORF1300;Parent=ORF1300.path1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1139;mismatches=12;indels=1;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	73689943	73691093	98	+	.	ID=ORF1300.mrna1.exon1;Name=ORF1300;Parent=ORF1300.mrna1;Target=ORF1300 1152 1 .
ChrX	stalkie_big_nohaplotig	CDS	73689943	73691093	98	+	0	ID=ORF1300.mrna1.cds1;Name=ORF1300;Parent=ORF1300.mrna1;Target=ORF1300 1152 1 .
ChrX	stalkie_big_nohaplotig	mRNA	72853895	72863957	.	+	.	ID=FBgn0002566.1.mrna1;Name=FBgn0002566.1;Parent=FBgn0002566.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2547;mismatches=6;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	72853895	72853948	100	+	.	ID=FBgn0002566.1.mrna1.exon1;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 1 54 +
ChrX	stalkie_big_nohaplotig	exon	72854020	72854142	99	+	.	ID=FBgn0002566.1.mrna1.exon2;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 55 177 +
ChrX	stalkie_big_nohaplotig	exon	72854218	72854391	100	+	.	ID=FBgn0002566.1.mrna1.exon3;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 178 351 +
ChrX	stalkie_big_nohaplotig	exon	72854782	72854902	100	+	.	ID=FBgn0002566.1.mrna1.exon4;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 352 472 +
ChrX	stalkie_big_nohaplotig	exon	72854956	72855154	100	+	.	ID=FBgn0002566.1.mrna1.exon5;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 473 671 +
ChrX	stalkie_big_nohaplotig	exon	72855215	72855369	100	+	.	ID=FBgn0002566.1.mrna1.exon6;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 672 826 +
ChrX	stalkie_big_nohaplotig	exon	72855428	72855614	99	+	.	ID=FBgn0002566.1.mrna1.exon7;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 827 1013 +
ChrX	stalkie_big_nohaplotig	exon	72855678	72855818	98	+	.	ID=FBgn0002566.1.mrna1.exon8;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 1014 1154 +
ChrX	stalkie_big_nohaplotig	exon	72859454	72859522	100	+	.	ID=FBgn0002566.1.mrna1.exon9;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 1155 1223 +
ChrX	stalkie_big_nohaplotig	exon	72860337	72860738	99	+	.	ID=FBgn0002566.1.mrna1.exon10;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 1224 1625 +
ChrX	stalkie_big_nohaplotig	exon	72860810	72860996	100	+	.	ID=FBgn0002566.1.mrna1.exon11;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 1626 1812 +
ChrX	stalkie_big_nohaplotig	exon	72862992	72863225	100	+	.	ID=FBgn0002566.1.mrna1.exon12;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 1813 2046 +
ChrX	stalkie_big_nohaplotig	exon	72863315	72863441	100	+	.	ID=FBgn0002566.1.mrna1.exon13;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 2047 2173 +
ChrX	stalkie_big_nohaplotig	exon	72863510	72863613	100	+	.	ID=FBgn0002566.1.mrna1.exon14;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 2174 2277 +
ChrX	stalkie_big_nohaplotig	exon	72863682	72863957	100	+	.	ID=FBgn0002566.1.mrna1.exon15;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 2278 2553 +
ChrX	stalkie_big_nohaplotig	CDS	72853895	72853948	100	+	0	ID=FBgn0002566.1.mrna1.cds1;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 1 54 +
ChrX	stalkie_big_nohaplotig	CDS	72854020	72854142	99	+	0	ID=FBgn0002566.1.mrna1.cds2;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 55 177 +
ChrX	stalkie_big_nohaplotig	CDS	72854218	72854391	100	+	0	ID=FBgn0002566.1.mrna1.cds3;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 178 351 +
ChrX	stalkie_big_nohaplotig	CDS	72854782	72854902	100	+	0	ID=FBgn0002566.1.mrna1.cds4;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 352 472 +
ChrX	stalkie_big_nohaplotig	CDS	72854956	72855154	100	+	1	ID=FBgn0002566.1.mrna1.cds5;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 473 671 +
ChrX	stalkie_big_nohaplotig	CDS	72855215	72855369	100	+	2	ID=FBgn0002566.1.mrna1.cds6;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 672 826 +
ChrX	stalkie_big_nohaplotig	CDS	72855428	72855614	99	+	1	ID=FBgn0002566.1.mrna1.cds7;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 827 1013 +
ChrX	stalkie_big_nohaplotig	CDS	72855678	72855818	98	+	2	ID=FBgn0002566.1.mrna1.cds8;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 1014 1154 +
ChrX	stalkie_big_nohaplotig	CDS	72859454	72859522	100	+	2	ID=FBgn0002566.1.mrna1.cds9;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 1155 1223 +
ChrX	stalkie_big_nohaplotig	CDS	72860337	72860738	99	+	2	ID=FBgn0002566.1.mrna1.cds10;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 1224 1625 +
ChrX	stalkie_big_nohaplotig	CDS	72860810	72860996	100	+	2	ID=FBgn0002566.1.mrna1.cds11;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 1626 1812 +
ChrX	stalkie_big_nohaplotig	CDS	72862992	72863225	100	+	0	ID=FBgn0002566.1.mrna1.cds12;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 1813 2046 +
ChrX	stalkie_big_nohaplotig	CDS	72863315	72863441	100	+	0	ID=FBgn0002566.1.mrna1.cds13;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 2047 2173 +
ChrX	stalkie_big_nohaplotig	CDS	72863510	72863613	100	+	1	ID=FBgn0002566.1.mrna1.cds14;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 2174 2277 +
ChrX	stalkie_big_nohaplotig	CDS	72863682	72863957	100	+	0	ID=FBgn0002566.1.mrna1.cds15;Name=FBgn0002566.1;Parent=FBgn0002566.1.mrna1;Target=FBgn0002566.1 2278 2553 +
ChrX	stalkie_big_nohaplotig	mRNA	12342945	12347402	.	-	.	ID=FBgn0031287.1.mrna1;Name=FBgn0031287.1;Parent=FBgn0031287.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1125;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	12347278	12347402	100	-	.	ID=FBgn0031287.1.mrna1.exon1;Name=FBgn0031287.1;Parent=FBgn0031287.1.mrna1;Target=FBgn0031287.1 1 125 +
ChrX	stalkie_big_nohaplotig	exon	12347152	12347224	100	-	.	ID=FBgn0031287.1.mrna1.exon2;Name=FBgn0031287.1;Parent=FBgn0031287.1.mrna1;Target=FBgn0031287.1 126 198 +
ChrX	stalkie_big_nohaplotig	exon	12346373	12347082	100	-	.	ID=FBgn0031287.1.mrna1.exon3;Name=FBgn0031287.1;Parent=FBgn0031287.1.mrna1;Target=FBgn0031287.1 199 908 +
ChrX	stalkie_big_nohaplotig	exon	12342945	12343161	100	-	.	ID=FBgn0031287.1.mrna1.exon4;Name=FBgn0031287.1;Parent=FBgn0031287.1.mrna1;Target=FBgn0031287.1 909 1125 +
ChrX	stalkie_big_nohaplotig	CDS	12347278	12347402	100	-	0	ID=FBgn0031287.1.mrna1.cds1;Name=FBgn0031287.1;Parent=FBgn0031287.1.mrna1;Target=FBgn0031287.1 1 125 +
ChrX	stalkie_big_nohaplotig	CDS	12347152	12347224	100	-	2	ID=FBgn0031287.1.mrna1.cds2;Name=FBgn0031287.1;Parent=FBgn0031287.1.mrna1;Target=FBgn0031287.1 126 198 +
ChrX	stalkie_big_nohaplotig	CDS	12346373	12347082	100	-	0	ID=FBgn0031287.1.mrna1.cds3;Name=FBgn0031287.1;Parent=FBgn0031287.1.mrna1;Target=FBgn0031287.1 199 908 +
ChrX	stalkie_big_nohaplotig	CDS	12342945	12343161	100	-	2	ID=FBgn0031287.1.mrna1.cds4;Name=FBgn0031287.1;Parent=FBgn0031287.1.mrna1;Target=FBgn0031287.1 909 1125 +
ChrX	stalkie_big_nohaplotig	mRNA	12297498	12298676	.	-	.	ID=FBgn0032857.1.mrna1;Name=FBgn0032857.1;Parent=FBgn0032857.1.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1179;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	12297498	12298676	100	-	.	ID=FBgn0032857.1.mrna1.exon1;Name=FBgn0032857.1;Parent=FBgn0032857.1.mrna1;Target=FBgn0032857.1 1179 1 .
ChrX	stalkie_big_nohaplotig	CDS	12297498	12298676	100	-	0	ID=FBgn0032857.1.mrna1.cds1;Name=FBgn0032857.1;Parent=FBgn0032857.1.mrna1;Target=FBgn0032857.1 1179 1 .
ChrX	stalkie_big_nohaplotig	mRNA	12459168	12461574	.	+	.	ID=FBgn0004381.1.mrna1;Name=FBgn0004381.1;Parent=FBgn0004381.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2346;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	12459168	12459865	100	+	.	ID=FBgn0004381.1.mrna1.exon1;Name=FBgn0004381.1;Parent=FBgn0004381.1.mrna1;Target=FBgn0004381.1 1 698 +
ChrX	stalkie_big_nohaplotig	exon	12459927	12461574	100	+	.	ID=FBgn0004381.1.mrna1.exon2;Name=FBgn0004381.1;Parent=FBgn0004381.1.mrna1;Target=FBgn0004381.1 699 2346 +
ChrX	stalkie_big_nohaplotig	CDS	12459168	12459865	100	+	0	ID=FBgn0004381.1.mrna1.cds1;Name=FBgn0004381.1;Parent=FBgn0004381.1.mrna1;Target=FBgn0004381.1 1 698 +
ChrX	stalkie_big_nohaplotig	CDS	12459927	12461574	100	+	2	ID=FBgn0004381.1.mrna1.cds2;Name=FBgn0004381.1;Parent=FBgn0004381.1.mrna1;Target=FBgn0004381.1 699 2346 +
ChrX	stalkie_big_nohaplotig	mRNA	12106466	12111087	.	-	.	ID=FBgn0000286.1.mrna1;Name=FBgn0000286.1;Parent=FBgn0000286.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1475;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	12109964	12111087	99	-	.	ID=FBgn0000286.1.mrna1.exon1;Name=FBgn0000286.1;Parent=FBgn0000286.1.mrna1;Target=FBgn0000286.1 1 1124 +
ChrX	stalkie_big_nohaplotig	exon	12109696	12109874	100	-	.	ID=FBgn0000286.1.mrna1.exon2;Name=FBgn0000286.1;Parent=FBgn0000286.1.mrna1;Target=FBgn0000286.1 1125 1303 +
ChrX	stalkie_big_nohaplotig	exon	12106466	12106638	100	-	.	ID=FBgn0000286.1.mrna1.exon3;Name=FBgn0000286.1;Parent=FBgn0000286.1.mrna1;Target=FBgn0000286.1 1304 1476 +
ChrX	stalkie_big_nohaplotig	CDS	12109964	12111087	99	-	0	ID=FBgn0000286.1.mrna1.cds1;Name=FBgn0000286.1;Parent=FBgn0000286.1.mrna1;Target=FBgn0000286.1 1 1124 +
ChrX	stalkie_big_nohaplotig	CDS	12109696	12109874	100	-	2	ID=FBgn0000286.1.mrna1.cds2;Name=FBgn0000286.1;Parent=FBgn0000286.1.mrna1;Target=FBgn0000286.1 1125 1303 +
ChrX	stalkie_big_nohaplotig	CDS	12106466	12106638	100	-	1	ID=FBgn0000286.1.mrna1.cds3;Name=FBgn0000286.1;Parent=FBgn0000286.1.mrna1;Target=FBgn0000286.1 1304 1476 +
ChrX	stalkie_big_nohaplotig	mRNA	12038896	12043108	.	-	.	ID=FBgn0031637.1.mrna1;Name=FBgn0031637.1;Parent=FBgn0031637.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1733;mismatches=0;indels=1;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	12042710	12043108	100	-	.	ID=FBgn0031637.1.mrna1.exon1;Name=FBgn0031637.1;Parent=FBgn0031637.1.mrna1;Target=FBgn0031637.1 1 399 +
ChrX	stalkie_big_nohaplotig	exon	12042379	12042634	100	-	.	ID=FBgn0031637.1.mrna1.exon2;Name=FBgn0031637.1;Parent=FBgn0031637.1.mrna1;Target=FBgn0031637.1 400 655 +
ChrX	stalkie_big_nohaplotig	exon	12042008	12042079	100	-	.	ID=FBgn0031637.1.mrna1.exon3;Name=FBgn0031637.1;Parent=FBgn0031637.1.mrna1;Target=FBgn0031637.1 656 727 +
ChrX	stalkie_big_nohaplotig	exon	12040725	12040785	100	-	.	ID=FBgn0031637.1.mrna1.exon4;Name=FBgn0031637.1;Parent=FBgn0031637.1.mrna1;Target=FBgn0031637.1 728 788 +
ChrX	stalkie_big_nohaplotig	exon	12040230	12040659	100	-	.	ID=FBgn0031637.1.mrna1.exon5;Name=FBgn0031637.1;Parent=FBgn0031637.1.mrna1;Target=FBgn0031637.1 789 1218 +
ChrX	stalkie_big_nohaplotig	exon	12039883	12040156	100	-	.	ID=FBgn0031637.1.mrna1.exon6;Name=FBgn0031637.1;Parent=FBgn0031637.1.mrna1;Target=FBgn0031637.1 1219 1492 +
ChrX	stalkie_big_nohaplotig	exon	12039046	12039198	100	-	.	ID=FBgn0031637.1.mrna1.exon7;Name=FBgn0031637.1;Parent=FBgn0031637.1.mrna1;Target=FBgn0031637.1 1493 1645 +
ChrX	stalkie_big_nohaplotig	exon	12038896	12038983	98	-	.	ID=FBgn0031637.1.mrna1.exon8;Name=FBgn0031637.1;Parent=FBgn0031637.1.mrna1;Target=FBgn0031637.1 1646 1734 +
ChrX	stalkie_big_nohaplotig	CDS	12042710	12043108	100	-	0	ID=FBgn0031637.1.mrna1.cds1;Name=FBgn0031637.1;Parent=FBgn0031637.1.mrna1;Target=FBgn0031637.1 1 399 +
ChrX	stalkie_big_nohaplotig	CDS	12042379	12042634	100	-	0	ID=FBgn0031637.1.mrna1.cds2;Name=FBgn0031637.1;Parent=FBgn0031637.1.mrna1;Target=FBgn0031637.1 400 655 +
ChrX	stalkie_big_nohaplotig	CDS	12042008	12042079	100	-	1	ID=FBgn0031637.1.mrna1.cds3;Name=FBgn0031637.1;Parent=FBgn0031637.1.mrna1;Target=FBgn0031637.1 656 727 +
ChrX	stalkie_big_nohaplotig	CDS	12040725	12040785	100	-	1	ID=FBgn0031637.1.mrna1.cds4;Name=FBgn0031637.1;Parent=FBgn0031637.1.mrna1;Target=FBgn0031637.1 728 788 +
ChrX	stalkie_big_nohaplotig	CDS	12040230	12040659	100	-	2	ID=FBgn0031637.1.mrna1.cds5;Name=FBgn0031637.1;Parent=FBgn0031637.1.mrna1;Target=FBgn0031637.1 789 1218 +
ChrX	stalkie_big_nohaplotig	CDS	12039883	12040156	100	-	0	ID=FBgn0031637.1.mrna1.cds6;Name=FBgn0031637.1;Parent=FBgn0031637.1.mrna1;Target=FBgn0031637.1 1219 1492 +
ChrX	stalkie_big_nohaplotig	CDS	12039046	12039198	100	-	1	ID=FBgn0031637.1.mrna1.cds7;Name=FBgn0031637.1;Parent=FBgn0031637.1.mrna1;Target=FBgn0031637.1 1493 1645 +
ChrX	stalkie_big_nohaplotig	CDS	12038896	12038983	98	-	1	ID=FBgn0031637.1.mrna1.cds8;Name=FBgn0031637.1;Parent=FBgn0031637.1.mrna1;Target=FBgn0031637.1 1646 1734 +
ChrX	stalkie_big_nohaplotig	mRNA	11911948	11914818	.	+	.	ID=FBgn0031926.1.mrna1;Name=FBgn0031926.1;Parent=FBgn0031926.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=2382;mismatches=6;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	11911948	11912976	100	+	.	ID=FBgn0031926.1.mrna1.exon1;Name=FBgn0031926.1;Parent=FBgn0031926.1.mrna1;Target=FBgn0031926.1 1 1029 +
ChrX	stalkie_big_nohaplotig	exon	11913045	11913396	99	+	.	ID=FBgn0031926.1.mrna1.exon2;Name=FBgn0031926.1;Parent=FBgn0031926.1.mrna1;Target=FBgn0031926.1 1030 1381 +
ChrX	stalkie_big_nohaplotig	exon	11913456	11914058	99	+	.	ID=FBgn0031926.1.mrna1.exon3;Name=FBgn0031926.1;Parent=FBgn0031926.1.mrna1;Target=FBgn0031926.1 1382 1984 +
ChrX	stalkie_big_nohaplotig	exon	11914127	11914374	100	+	.	ID=FBgn0031926.1.mrna1.exon4;Name=FBgn0031926.1;Parent=FBgn0031926.1.mrna1;Target=FBgn0031926.1 1985 2232 +
ChrX	stalkie_big_nohaplotig	exon	11914663	11914818	100	+	.	ID=FBgn0031926.1.mrna1.exon5;Name=FBgn0031926.1;Parent=FBgn0031926.1.mrna1;Target=FBgn0031926.1 2233 2388 +
ChrX	stalkie_big_nohaplotig	CDS	11911948	11912976	100	+	0	ID=FBgn0031926.1.mrna1.cds1;Name=FBgn0031926.1;Parent=FBgn0031926.1.mrna1;Target=FBgn0031926.1 1 1029 +
ChrX	stalkie_big_nohaplotig	CDS	11913045	11913396	99	+	0	ID=FBgn0031926.1.mrna1.cds2;Name=FBgn0031926.1;Parent=FBgn0031926.1.mrna1;Target=FBgn0031926.1 1030 1381 +
ChrX	stalkie_big_nohaplotig	CDS	11913456	11914058	99	+	1	ID=FBgn0031926.1.mrna1.cds3;Name=FBgn0031926.1;Parent=FBgn0031926.1.mrna1;Target=FBgn0031926.1 1382 1984 +
ChrX	stalkie_big_nohaplotig	CDS	11914127	11914374	100	+	1	ID=FBgn0031926.1.mrna1.cds4;Name=FBgn0031926.1;Parent=FBgn0031926.1.mrna1;Target=FBgn0031926.1 1985 2232 +
ChrX	stalkie_big_nohaplotig	CDS	11914663	11914818	100	+	0	ID=FBgn0031926.1.mrna1.cds5;Name=FBgn0031926.1;Parent=FBgn0031926.1.mrna1;Target=FBgn0031926.1 2233 2388 +
ChrX	stalkie_big_nohaplotig	mRNA	11969168	11969926	.	+	.	ID=FBgn0051812.1.mrna1;Name=FBgn0051812.1;Parent=FBgn0051812.1.path1;Dir=sensecoverage=100.0;identity=99.1;matches=696;mismatches=5;indels=1;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	11969168	11969587	99	+	.	ID=FBgn0051812.1.mrna1.exon1;Name=FBgn0051812.1;Parent=FBgn0051812.1.mrna1;Target=FBgn0051812.1 1 421 +
ChrX	stalkie_big_nohaplotig	exon	11969646	11969926	98	+	.	ID=FBgn0051812.1.mrna1.exon2;Name=FBgn0051812.1;Parent=FBgn0051812.1.mrna1;Target=FBgn0051812.1 422 702 +
ChrX	stalkie_big_nohaplotig	CDS	11969170	11969390	99	+	0	ID=FBgn0051812.1.mrna1.cds1;Name=FBgn0051812.1;Parent=FBgn0051812.1.mrna1;Target=FBgn0051812.1 3 224 +
ChrX	stalkie_big_nohaplotig	mRNA	11767372	11769915	.	-	.	ID=FBgn0085403.1.mrna1;Name=FBgn0085403.1;Parent=FBgn0085403.1.path1;Dir=sensecoverage=83.8;identity=99.9;matches=2382;mismatches=3;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	11768236	11769915	99	-	.	ID=FBgn0085403.1.mrna1.exon1;Name=FBgn0085403.1;Parent=FBgn0085403.1.mrna1;Target=FBgn0085403.1 463 2142 +
ChrX	stalkie_big_nohaplotig	exon	11767613	11768164	99	-	.	ID=FBgn0085403.1.mrna1.exon2;Name=FBgn0085403.1;Parent=FBgn0085403.1.mrna1;Target=FBgn0085403.1 2143 2694 +
ChrX	stalkie_big_nohaplotig	exon	11767372	11767524	100	-	.	ID=FBgn0085403.1.mrna1.exon3;Name=FBgn0085403.1;Parent=FBgn0085403.1.mrna1;Target=FBgn0085403.1 2695 2847 +
ChrX	stalkie_big_nohaplotig	CDS	11768236	11769915	99	-	0	ID=FBgn0085403.1.mrna1.cds1;Name=FBgn0085403.1;Parent=FBgn0085403.1.mrna1;Target=FBgn0085403.1 463 2142 +
ChrX	stalkie_big_nohaplotig	CDS	11767613	11768164	99	-	0	ID=FBgn0085403.1.mrna1.cds2;Name=FBgn0085403.1;Parent=FBgn0085403.1.mrna1;Target=FBgn0085403.1 2143 2694 +
ChrX	stalkie_big_nohaplotig	CDS	11767372	11767524	100	-	0	ID=FBgn0085403.1.mrna1.cds3;Name=FBgn0085403.1;Parent=FBgn0085403.1.mrna1;Target=FBgn0085403.1 2695 2847 +
ChrX	stalkie_big_nohaplotig	mRNA	9805699	9810599	.	+	.	ID=FBgn0032717.1.mrna1;Name=FBgn0032717.1;Parent=FBgn0032717.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=4175;mismatches=1;indels=6;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	9805699	9806137	100	+	.	ID=FBgn0032717.1.mrna1.exon1;Name=FBgn0032717.1;Parent=FBgn0032717.1.mrna1;Target=FBgn0032717.1 1 439 +
ChrX	stalkie_big_nohaplotig	exon	9806254	9806558	100	+	.	ID=FBgn0032717.1.mrna1.exon2;Name=FBgn0032717.1;Parent=FBgn0032717.1.mrna1;Target=FBgn0032717.1 440 744 +
ChrX	stalkie_big_nohaplotig	exon	9806627	9807814	99	+	.	ID=FBgn0032717.1.mrna1.exon3;Name=FBgn0032717.1;Parent=FBgn0032717.1.mrna1;Target=FBgn0032717.1 745 1932 +
ChrX	stalkie_big_nohaplotig	exon	9808093	9808233	100	+	.	ID=FBgn0032717.1.mrna1.exon4;Name=FBgn0032717.1;Parent=FBgn0032717.1.mrna1;Target=FBgn0032717.1 1933 2073 +
ChrX	stalkie_big_nohaplotig	exon	9808287	9808426	100	+	.	ID=FBgn0032717.1.mrna1.exon5;Name=FBgn0032717.1;Parent=FBgn0032717.1.mrna1;Target=FBgn0032717.1 2074 2213 +
ChrX	stalkie_big_nohaplotig	exon	9808483	9808622	100	+	.	ID=FBgn0032717.1.mrna1.exon6;Name=FBgn0032717.1;Parent=FBgn0032717.1.mrna1;Target=FBgn0032717.1 2214 2353 +
ChrX	stalkie_big_nohaplotig	exon	9808695	9808985	100	+	.	ID=FBgn0032717.1.mrna1.exon7;Name=FBgn0032717.1;Parent=FBgn0032717.1.mrna1;Target=FBgn0032717.1 2354 2644 +
ChrX	stalkie_big_nohaplotig	exon	9809062	9810599	99	+	.	ID=FBgn0032717.1.mrna1.exon8;Name=FBgn0032717.1;Parent=FBgn0032717.1.mrna1;Target=FBgn0032717.1 2645 4176 +
ChrX	stalkie_big_nohaplotig	CDS	9805699	9806137	100	+	0	ID=FBgn0032717.1.mrna1.cds1;Name=FBgn0032717.1;Parent=FBgn0032717.1.mrna1;Target=FBgn0032717.1 1 439 +
ChrX	stalkie_big_nohaplotig	CDS	9806254	9806558	100	+	1	ID=FBgn0032717.1.mrna1.cds2;Name=FBgn0032717.1;Parent=FBgn0032717.1.mrna1;Target=FBgn0032717.1 440 744 +
ChrX	stalkie_big_nohaplotig	CDS	9806627	9807814	99	+	0	ID=FBgn0032717.1.mrna1.cds3;Name=FBgn0032717.1;Parent=FBgn0032717.1.mrna1;Target=FBgn0032717.1 745 1932 +
ChrX	stalkie_big_nohaplotig	CDS	9808093	9808233	100	+	0	ID=FBgn0032717.1.mrna1.cds4;Name=FBgn0032717.1;Parent=FBgn0032717.1.mrna1;Target=FBgn0032717.1 1933 2073 +
ChrX	stalkie_big_nohaplotig	CDS	9808287	9808426	100	+	0	ID=FBgn0032717.1.mrna1.cds5;Name=FBgn0032717.1;Parent=FBgn0032717.1.mrna1;Target=FBgn0032717.1 2074 2213 +
ChrX	stalkie_big_nohaplotig	CDS	9808483	9808622	100	+	2	ID=FBgn0032717.1.mrna1.cds6;Name=FBgn0032717.1;Parent=FBgn0032717.1.mrna1;Target=FBgn0032717.1 2214 2353 +
ChrX	stalkie_big_nohaplotig	CDS	9808695	9808985	100	+	1	ID=FBgn0032717.1.mrna1.cds7;Name=FBgn0032717.1;Parent=FBgn0032717.1.mrna1;Target=FBgn0032717.1 2354 2644 +
ChrX	stalkie_big_nohaplotig	CDS	9809062	9810599	99	+	1	ID=FBgn0032717.1.mrna1.cds8;Name=FBgn0032717.1;Parent=FBgn0032717.1.mrna1;Target=FBgn0032717.1 2645 4176 +
ChrX	stalkie_big_nohaplotig	mRNA	9882105	9958519	.	+	.	ID=FBgn0085369.1.mrna1;Name=FBgn0085369.1;Parent=FBgn0085369.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1436;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	9882105	9882281	100	+	.	ID=FBgn0085369.1.mrna1.exon1;Name=FBgn0085369.1;Parent=FBgn0085369.1.mrna1;Target=FBgn0085369.1 1 177 +
ChrX	stalkie_big_nohaplotig	exon	9909421	9909544	100	+	.	ID=FBgn0085369.1.mrna1.exon2;Name=FBgn0085369.1;Parent=FBgn0085369.1.mrna1;Target=FBgn0085369.1 178 301 +
ChrX	stalkie_big_nohaplotig	exon	9926935	9927026	100	+	.	ID=FBgn0085369.1.mrna1.exon3;Name=FBgn0085369.1;Parent=FBgn0085369.1.mrna1;Target=FBgn0085369.1 302 393 +
ChrX	stalkie_big_nohaplotig	exon	9927194	9927295	100	+	.	ID=FBgn0085369.1.mrna1.exon4;Name=FBgn0085369.1;Parent=FBgn0085369.1.mrna1;Target=FBgn0085369.1 394 495 +
ChrX	stalkie_big_nohaplotig	exon	9941945	9942046	100	+	.	ID=FBgn0085369.1.mrna1.exon5;Name=FBgn0085369.1;Parent=FBgn0085369.1.mrna1;Target=FBgn0085369.1 496 597 +
ChrX	stalkie_big_nohaplotig	exon	9942124	9942506	99	+	.	ID=FBgn0085369.1.mrna1.exon6;Name=FBgn0085369.1;Parent=FBgn0085369.1.mrna1;Target=FBgn0085369.1 598 980 +
ChrX	stalkie_big_nohaplotig	exon	9957535	9957692	100	+	.	ID=FBgn0085369.1.mrna1.exon7;Name=FBgn0085369.1;Parent=FBgn0085369.1.mrna1;Target=FBgn0085369.1 981 1138 +
ChrX	stalkie_big_nohaplotig	exon	9958221	9958519	100	+	.	ID=FBgn0085369.1.mrna1.exon8;Name=FBgn0085369.1;Parent=FBgn0085369.1.mrna1;Target=FBgn0085369.1 1139 1437 +
ChrX	stalkie_big_nohaplotig	CDS	9882105	9882281	100	+	0	ID=FBgn0085369.1.mrna1.cds1;Name=FBgn0085369.1;Parent=FBgn0085369.1.mrna1;Target=FBgn0085369.1 1 177 +
ChrX	stalkie_big_nohaplotig	CDS	9909421	9909544	100	+	0	ID=FBgn0085369.1.mrna1.cds2;Name=FBgn0085369.1;Parent=FBgn0085369.1.mrna1;Target=FBgn0085369.1 178 301 +
ChrX	stalkie_big_nohaplotig	CDS	9926935	9927026	100	+	1	ID=FBgn0085369.1.mrna1.cds3;Name=FBgn0085369.1;Parent=FBgn0085369.1.mrna1;Target=FBgn0085369.1 302 393 +
ChrX	stalkie_big_nohaplotig	CDS	9927194	9927295	100	+	0	ID=FBgn0085369.1.mrna1.cds4;Name=FBgn0085369.1;Parent=FBgn0085369.1.mrna1;Target=FBgn0085369.1 394 495 +
ChrX	stalkie_big_nohaplotig	CDS	9941945	9942046	100	+	0	ID=FBgn0085369.1.mrna1.cds5;Name=FBgn0085369.1;Parent=FBgn0085369.1.mrna1;Target=FBgn0085369.1 496 597 +
ChrX	stalkie_big_nohaplotig	CDS	9942124	9942506	99	+	0	ID=FBgn0085369.1.mrna1.cds6;Name=FBgn0085369.1;Parent=FBgn0085369.1.mrna1;Target=FBgn0085369.1 598 980 +
ChrX	stalkie_big_nohaplotig	CDS	9957535	9957692	100	+	2	ID=FBgn0085369.1.mrna1.cds7;Name=FBgn0085369.1;Parent=FBgn0085369.1.mrna1;Target=FBgn0085369.1 981 1138 +
ChrX	stalkie_big_nohaplotig	CDS	9958221	9958519	100	+	1	ID=FBgn0085369.1.mrna1.cds8;Name=FBgn0085369.1;Parent=FBgn0085369.1.mrna1;Target=FBgn0085369.1 1139 1437 +
ChrX	stalkie_big_nohaplotig	mRNA	9520054	9521433	.	-	.	ID=FBgn0004567.1.mrna1;Name=FBgn0004567.1;Parent=FBgn0004567.1.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1376;mismatches=2;indels=0;unknowns=2
ChrX	stalkie_big_nohaplotig	exon	9520054	9521433	99	-	.	ID=FBgn0004567.1.mrna1.exon1;Name=FBgn0004567.1;Parent=FBgn0004567.1.mrna1;Target=FBgn0004567.1 1380 1 .
ChrX	stalkie_big_nohaplotig	CDS	9520054	9521433	99	-	0	ID=FBgn0004567.1.mrna1.cds1;Name=FBgn0004567.1;Parent=FBgn0004567.1.mrna1;Target=FBgn0004567.1 1380 1 .
ChrX	stalkie_big_nohaplotig	mRNA	23958294	23963722	.	+	.	ID=FBgn0029924.1.mrna1;Name=FBgn0029924.1;Parent=FBgn0029924.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=1517;mismatches=10;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	23958294	23958766	98	+	.	ID=FBgn0029924.1.mrna1.exon1;Name=FBgn0029924.1;Parent=FBgn0029924.1.mrna1;Target=FBgn0029924.1 1 473 +
ChrX	stalkie_big_nohaplotig	exon	23962669	23963722	99	+	.	ID=FBgn0029924.1.mrna1.exon2;Name=FBgn0029924.1;Parent=FBgn0029924.1.mrna1;Target=FBgn0029924.1 474 1527 +
ChrX	stalkie_big_nohaplotig	CDS	23958294	23958766	98	+	0	ID=FBgn0029924.1.mrna1.cds1;Name=FBgn0029924.1;Parent=FBgn0029924.1.mrna1;Target=FBgn0029924.1 1 473 +
ChrX	stalkie_big_nohaplotig	CDS	23962669	23963722	99	+	2	ID=FBgn0029924.1.mrna1.cds2;Name=FBgn0029924.1;Parent=FBgn0029924.1.mrna1;Target=FBgn0029924.1 474 1527 +
ChrX	stalkie_big_nohaplotig	mRNA	23244697	23245572	.	-	.	ID=ORF2332.mrna1;Name=ORF2332;Parent=ORF2332.path1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=865;mismatches=11;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	23244697	23245572	98	-	.	ID=ORF2332.mrna1.exon1;Name=ORF2332;Parent=ORF2332.mrna1;Target=ORF2332 876 1 .
ChrX	stalkie_big_nohaplotig	CDS	23244697	23245572	98	-	0	ID=ORF2332.mrna1.cds1;Name=ORF2332;Parent=ORF2332.mrna1;Target=ORF2332 876 1 .
ChrX	stalkie_big_nohaplotig	mRNA	23216944	23217819	.	+	.	ID=ORF2332.mrna2;Name=ORF2332;Parent=ORF2332.path2;Dir=indeterminatecoverage=100.0;identity=98.4;matches=862;mismatches=14;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	23216944	23217819	98	+	.	ID=ORF2332.mrna2.exon1;Name=ORF2332;Parent=ORF2332.mrna2;Target=ORF2332 876 1 .
ChrX	stalkie_big_nohaplotig	CDS	23216944	23217819	98	+	0	ID=ORF2332.mrna2.cds1;Name=ORF2332;Parent=ORF2332.mrna2;Target=ORF2332 876 1 .
ChrX	stalkie_big_nohaplotig	mRNA	23837972	23840062	.	-	.	ID=FBgn0031968.1.mrna1;Name=FBgn0031968.1;Parent=FBgn0031968.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1017;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	23839873	23840062	100	-	.	ID=FBgn0031968.1.mrna1.exon1;Name=FBgn0031968.1;Parent=FBgn0031968.1.mrna1;Target=FBgn0031968.1 1 190 +
ChrX	stalkie_big_nohaplotig	exon	23839498	23839751	100	-	.	ID=FBgn0031968.1.mrna1.exon2;Name=FBgn0031968.1;Parent=FBgn0031968.1.mrna1;Target=FBgn0031968.1 191 444 +
ChrX	stalkie_big_nohaplotig	exon	23838387	23838599	100	-	.	ID=FBgn0031968.1.mrna1.exon3;Name=FBgn0031968.1;Parent=FBgn0031968.1.mrna1;Target=FBgn0031968.1 445 657 +
ChrX	stalkie_big_nohaplotig	exon	23837972	23838331	100	-	.	ID=FBgn0031968.1.mrna1.exon4;Name=FBgn0031968.1;Parent=FBgn0031968.1.mrna1;Target=FBgn0031968.1 658 1017 +
ChrX	stalkie_big_nohaplotig	CDS	23839873	23840062	100	-	0	ID=FBgn0031968.1.mrna1.cds1;Name=FBgn0031968.1;Parent=FBgn0031968.1.mrna1;Target=FBgn0031968.1 1 190 +
ChrX	stalkie_big_nohaplotig	CDS	23839498	23839751	100	-	1	ID=FBgn0031968.1.mrna1.cds2;Name=FBgn0031968.1;Parent=FBgn0031968.1.mrna1;Target=FBgn0031968.1 191 444 +
ChrX	stalkie_big_nohaplotig	CDS	23838387	23838599	100	-	0	ID=FBgn0031968.1.mrna1.cds3;Name=FBgn0031968.1;Parent=FBgn0031968.1.mrna1;Target=FBgn0031968.1 445 657 +
ChrX	stalkie_big_nohaplotig	CDS	23837972	23838331	100	-	0	ID=FBgn0031968.1.mrna1.cds4;Name=FBgn0031968.1;Parent=FBgn0031968.1.mrna1;Target=FBgn0031968.1 658 1017 +
ChrX	stalkie_big_nohaplotig	mRNA	23879061	23880043	.	+	.	ID=FBgn0032001.1.mrna1;Name=FBgn0032001.1;Parent=FBgn0032001.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=494;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	23879061	23879130	100	+	.	ID=FBgn0032001.1.mrna1.exon1;Name=FBgn0032001.1;Parent=FBgn0032001.1.mrna1;Target=FBgn0032001.1 1 70 +
ChrX	stalkie_big_nohaplotig	exon	23879619	23880043	99	+	.	ID=FBgn0032001.1.mrna1.exon2;Name=FBgn0032001.1;Parent=FBgn0032001.1.mrna1;Target=FBgn0032001.1 71 495 +
ChrX	stalkie_big_nohaplotig	CDS	23879061	23879130	100	+	0	ID=FBgn0032001.1.mrna1.cds1;Name=FBgn0032001.1;Parent=FBgn0032001.1.mrna1;Target=FBgn0032001.1 1 70 +
ChrX	stalkie_big_nohaplotig	CDS	23879619	23880043	99	+	1	ID=FBgn0032001.1.mrna1.cds2;Name=FBgn0032001.1;Parent=FBgn0032001.1.mrna1;Target=FBgn0032001.1 71 495 +
ChrX	stalkie_big_nohaplotig	mRNA	23342960	23349925	.	-	.	ID=FBgn0086902.1.mrna1;Name=FBgn0086902.1;Parent=FBgn0086902.1.path1;Dir=sensecoverage=99.6;identity=99.9;matches=6335;mismatches=4;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	23347666	23349925	99	-	.	ID=FBgn0086902.1.mrna1.exon1;Name=FBgn0086902.1;Parent=FBgn0086902.1.mrna1;Target=FBgn0086902.1 25 2284 +
ChrX	stalkie_big_nohaplotig	exon	23347307	23347583	100	-	.	ID=FBgn0086902.1.mrna1.exon2;Name=FBgn0086902.1;Parent=FBgn0086902.1.mrna1;Target=FBgn0086902.1 2285 2561 +
ChrX	stalkie_big_nohaplotig	exon	23346870	23347086	100	-	.	ID=FBgn0086902.1.mrna1.exon3;Name=FBgn0086902.1;Parent=FBgn0086902.1.mrna1;Target=FBgn0086902.1 2562 2778 +
ChrX	stalkie_big_nohaplotig	exon	23346533	23346773	100	-	.	ID=FBgn0086902.1.mrna1.exon4;Name=FBgn0086902.1;Parent=FBgn0086902.1.mrna1;Target=FBgn0086902.1 2779 3019 +
ChrX	stalkie_big_nohaplotig	exon	23346179	23346437	100	-	.	ID=FBgn0086902.1.mrna1.exon5;Name=FBgn0086902.1;Parent=FBgn0086902.1.mrna1;Target=FBgn0086902.1 3020 3278 +
ChrX	stalkie_big_nohaplotig	exon	23345764	23346117	100	-	.	ID=FBgn0086902.1.mrna1.exon6;Name=FBgn0086902.1;Parent=FBgn0086902.1.mrna1;Target=FBgn0086902.1 3279 3632 +
ChrX	stalkie_big_nohaplotig	exon	23342960	23345690	99	-	.	ID=FBgn0086902.1.mrna1.exon7;Name=FBgn0086902.1;Parent=FBgn0086902.1.mrna1;Target=FBgn0086902.1 3633 6363 +
ChrX	stalkie_big_nohaplotig	CDS	23347666	23349925	99	-	0	ID=FBgn0086902.1.mrna1.cds1;Name=FBgn0086902.1;Parent=FBgn0086902.1.mrna1;Target=FBgn0086902.1 25 2284 +
ChrX	stalkie_big_nohaplotig	CDS	23347307	23347583	100	-	1	ID=FBgn0086902.1.mrna1.cds2;Name=FBgn0086902.1;Parent=FBgn0086902.1.mrna1;Target=FBgn0086902.1 2285 2561 +
ChrX	stalkie_big_nohaplotig	CDS	23346870	23347086	100	-	2	ID=FBgn0086902.1.mrna1.cds3;Name=FBgn0086902.1;Parent=FBgn0086902.1.mrna1;Target=FBgn0086902.1 2562 2778 +
ChrX	stalkie_big_nohaplotig	CDS	23346533	23346773	100	-	0	ID=FBgn0086902.1.mrna1.cds4;Name=FBgn0086902.1;Parent=FBgn0086902.1.mrna1;Target=FBgn0086902.1 2779 3019 +
ChrX	stalkie_big_nohaplotig	CDS	23346179	23346437	100	-	1	ID=FBgn0086902.1.mrna1.cds5;Name=FBgn0086902.1;Parent=FBgn0086902.1.mrna1;Target=FBgn0086902.1 3020 3278 +
ChrX	stalkie_big_nohaplotig	CDS	23345764	23346117	100	-	2	ID=FBgn0086902.1.mrna1.cds6;Name=FBgn0086902.1;Parent=FBgn0086902.1.mrna1;Target=FBgn0086902.1 3279 3632 +
ChrX	stalkie_big_nohaplotig	CDS	23342960	23345690	99	-	2	ID=FBgn0086902.1.mrna1.cds7;Name=FBgn0086902.1;Parent=FBgn0086902.1.mrna1;Target=FBgn0086902.1 3633 6363 +
Chr1	stalkie_big_nohaplotig	mRNA	54272384	54273686	.	-	.	ID=ORF1235.mrna1;Name=ORF1235;Parent=ORF1235.path1;Dir=sensecoverage=100.0;identity=98.6;matches=1156;mismatches=17;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	54273643	54273686	100	-	.	ID=ORF1235.mrna1.exon1;Name=ORF1235;Parent=ORF1235.mrna1;Target=ORF1235 1 44 +
Chr1	stalkie_big_nohaplotig	exon	54273118	54273574	96	-	.	ID=ORF1235.mrna1.exon2;Name=ORF1235;Parent=ORF1235.mrna1;Target=ORF1235 45 501 +
Chr1	stalkie_big_nohaplotig	exon	54272384	54273055	99	-	.	ID=ORF1235.mrna1.exon3;Name=ORF1235;Parent=ORF1235.mrna1;Target=ORF1235 502 1173 +
Chr1	stalkie_big_nohaplotig	CDS	54273643	54273686	100	-	0	ID=ORF1235.mrna1.cds1;Name=ORF1235;Parent=ORF1235.mrna1;Target=ORF1235 1 44 +
Chr1	stalkie_big_nohaplotig	CDS	54273118	54273574	96	-	2	ID=ORF1235.mrna1.cds2;Name=ORF1235;Parent=ORF1235.mrna1;Target=ORF1235 45 501 +
Chr1	stalkie_big_nohaplotig	CDS	54272384	54273055	99	-	0	ID=ORF1235.mrna1.cds3;Name=ORF1235;Parent=ORF1235.mrna1;Target=ORF1235 502 1173 +
ChrX	stalkie_big_nohaplotig	mRNA	60195042	60198485	.	+	.	ID=FBgn0004406.1.mrna1;Name=FBgn0004406.1;Parent=FBgn0004406.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3386;mismatches=0;indels=1;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	60195042	60197784	99	+	.	ID=FBgn0004406.1.mrna1.exon1;Name=FBgn0004406.1;Parent=FBgn0004406.1.mrna1;Target=FBgn0004406.1 1 2744 +
ChrX	stalkie_big_nohaplotig	exon	60197843	60198485	100	+	.	ID=FBgn0004406.1.mrna1.exon2;Name=FBgn0004406.1;Parent=FBgn0004406.1.mrna1;Target=FBgn0004406.1 2745 3387 +
ChrX	stalkie_big_nohaplotig	CDS	60195044	60195123	98	+	0	ID=FBgn0004406.1.mrna1.cds1;Name=FBgn0004406.1;Parent=FBgn0004406.1.mrna1;Target=FBgn0004406.1 3 83 +
Chr2	stalkie_big_nohaplotig	mRNA	100772184	100790513	.	-	.	ID=FBgn0027948.1.mrna1;Name=FBgn0027948.1;Parent=FBgn0027948.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=6279;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	100789927	100790513	100	-	.	ID=FBgn0027948.1.mrna1.exon1;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 1 587 +
Chr2	stalkie_big_nohaplotig	exon	100787928	100788038	100	-	.	ID=FBgn0027948.1.mrna1.exon2;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 588 698 +
Chr2	stalkie_big_nohaplotig	exon	100787797	100787864	100	-	.	ID=FBgn0027948.1.mrna1.exon3;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 699 766 +
Chr2	stalkie_big_nohaplotig	exon	100786324	100786643	100	-	.	ID=FBgn0027948.1.mrna1.exon4;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 767 1086 +
Chr2	stalkie_big_nohaplotig	exon	100785394	100786260	100	-	.	ID=FBgn0027948.1.mrna1.exon5;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 1087 1953 +
Chr2	stalkie_big_nohaplotig	exon	100784280	100785291	100	-	.	ID=FBgn0027948.1.mrna1.exon6;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 1954 2965 +
Chr2	stalkie_big_nohaplotig	exon	100783561	100784218	100	-	.	ID=FBgn0027948.1.mrna1.exon7;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 2966 3623 +
Chr2	stalkie_big_nohaplotig	exon	100782997	100783234	100	-	.	ID=FBgn0027948.1.mrna1.exon8;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 3624 3861 +
Chr2	stalkie_big_nohaplotig	exon	100781328	100781851	100	-	.	ID=FBgn0027948.1.mrna1.exon9;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 3862 4385 +
Chr2	stalkie_big_nohaplotig	exon	100781076	100781153	100	-	.	ID=FBgn0027948.1.mrna1.exon10;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 4386 4463 +
Chr2	stalkie_big_nohaplotig	exon	100778564	100778911	100	-	.	ID=FBgn0027948.1.mrna1.exon11;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 4464 4811 +
Chr2	stalkie_big_nohaplotig	exon	100776636	100776813	100	-	.	ID=FBgn0027948.1.mrna1.exon12;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 4812 4989 +
Chr2	stalkie_big_nohaplotig	exon	100776316	100776569	100	-	.	ID=FBgn0027948.1.mrna1.exon13;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 4990 5243 +
Chr2	stalkie_big_nohaplotig	exon	100775637	100775967	100	-	.	ID=FBgn0027948.1.mrna1.exon14;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 5244 5574 +
Chr2	stalkie_big_nohaplotig	exon	100775093	100775269	100	-	.	ID=FBgn0027948.1.mrna1.exon15;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 5575 5751 +
Chr2	stalkie_big_nohaplotig	exon	100774845	100775025	100	-	.	ID=FBgn0027948.1.mrna1.exon16;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 5752 5932 +
Chr2	stalkie_big_nohaplotig	exon	100772394	100772665	100	-	.	ID=FBgn0027948.1.mrna1.exon17;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 5933 6204 +
Chr2	stalkie_big_nohaplotig	exon	100772184	100772258	100	-	.	ID=FBgn0027948.1.mrna1.exon18;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 6205 6279 +
Chr2	stalkie_big_nohaplotig	CDS	100789927	100790513	100	-	0	ID=FBgn0027948.1.mrna1.cds1;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 1 587 +
Chr2	stalkie_big_nohaplotig	CDS	100787928	100788038	100	-	2	ID=FBgn0027948.1.mrna1.cds2;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 588 698 +
Chr2	stalkie_big_nohaplotig	CDS	100787797	100787864	100	-	2	ID=FBgn0027948.1.mrna1.cds3;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 699 766 +
Chr2	stalkie_big_nohaplotig	CDS	100786324	100786643	100	-	1	ID=FBgn0027948.1.mrna1.cds4;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 767 1086 +
Chr2	stalkie_big_nohaplotig	CDS	100785394	100786260	100	-	0	ID=FBgn0027948.1.mrna1.cds5;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 1087 1953 +
Chr2	stalkie_big_nohaplotig	CDS	100784280	100785291	100	-	0	ID=FBgn0027948.1.mrna1.cds6;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 1954 2965 +
Chr2	stalkie_big_nohaplotig	CDS	100783561	100784218	100	-	1	ID=FBgn0027948.1.mrna1.cds7;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 2966 3623 +
Chr2	stalkie_big_nohaplotig	CDS	100782997	100783234	100	-	2	ID=FBgn0027948.1.mrna1.cds8;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 3624 3861 +
Chr2	stalkie_big_nohaplotig	CDS	100781328	100781851	100	-	0	ID=FBgn0027948.1.mrna1.cds9;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 3862 4385 +
Chr2	stalkie_big_nohaplotig	CDS	100781076	100781153	100	-	2	ID=FBgn0027948.1.mrna1.cds10;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 4386 4463 +
Chr2	stalkie_big_nohaplotig	CDS	100778564	100778911	100	-	2	ID=FBgn0027948.1.mrna1.cds11;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 4464 4811 +
Chr2	stalkie_big_nohaplotig	CDS	100776636	100776813	100	-	2	ID=FBgn0027948.1.mrna1.cds12;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 4812 4989 +
Chr2	stalkie_big_nohaplotig	CDS	100776316	100776569	100	-	0	ID=FBgn0027948.1.mrna1.cds13;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 4990 5243 +
Chr2	stalkie_big_nohaplotig	CDS	100775637	100775967	100	-	2	ID=FBgn0027948.1.mrna1.cds14;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 5244 5574 +
Chr2	stalkie_big_nohaplotig	CDS	100775093	100775269	100	-	0	ID=FBgn0027948.1.mrna1.cds15;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 5575 5751 +
Chr2	stalkie_big_nohaplotig	CDS	100774845	100775025	100	-	0	ID=FBgn0027948.1.mrna1.cds16;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 5752 5932 +
Chr2	stalkie_big_nohaplotig	CDS	100772394	100772665	100	-	1	ID=FBgn0027948.1.mrna1.cds17;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 5933 6204 +
Chr2	stalkie_big_nohaplotig	CDS	100772184	100772258	100	-	0	ID=FBgn0027948.1.mrna1.cds18;Name=FBgn0027948.1;Parent=FBgn0027948.1.mrna1;Target=FBgn0027948.1 6205 6279 +
ChrX	stalkie_big_nohaplotig	mRNA	34102150	34105045	.	-	.	ID=FBgn0015320.5.mrna1;Name=FBgn0015320.5;Parent=FBgn0015320.5.path1;Dir=sensecoverage=98.4;identity=100.0;matches=632;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	34104499	34105045	100	-	.	ID=FBgn0015320.5.mrna1.exon1;Name=FBgn0015320.5;Parent=FBgn0015320.5.mrna1;Target=FBgn0015320.5 1 547 +
ChrX	stalkie_big_nohaplotig	exon	34102150	34102234	100	-	.	ID=FBgn0015320.5.mrna1.exon2;Name=FBgn0015320.5;Parent=FBgn0015320.5.mrna1;Target=FBgn0015320.5 548 632 +
ChrX	stalkie_big_nohaplotig	CDS	34104499	34105045	100	-	0	ID=FBgn0015320.5.mrna1.cds1;Name=FBgn0015320.5;Parent=FBgn0015320.5.mrna1;Target=FBgn0015320.5 1 547 +
ChrX	stalkie_big_nohaplotig	CDS	34102152	34102234	100	-	1	ID=FBgn0015320.5.mrna1.cds2;Name=FBgn0015320.5;Parent=FBgn0015320.5.mrna1;Target=FBgn0015320.5 548 630 +
ChrX	stalkie_big_nohaplotig	mRNA	33892305	33893431	.	-	.	ID=FBgn0015024.2.mrna1;Name=FBgn0015024.2;Parent=FBgn0015024.2.path1;Dir=indeterminatecoverage=99.4;identity=99.7;matches=1124;mismatches=3;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	33892305	33893431	99	-	.	ID=FBgn0015024.2.mrna1.exon1;Name=FBgn0015024.2;Parent=FBgn0015024.2.mrna1;Target=FBgn0015024.2 1134 8 .
ChrX	stalkie_big_nohaplotig	CDS	33892305	33893429	99	-	0	ID=FBgn0015024.2.mrna1.cds1;Name=FBgn0015024.2;Parent=FBgn0015024.2.mrna1;Target=FBgn0015024.2 1134 10 .
ChrX	stalkie_big_nohaplotig	mRNA	33899409	33903668	.	+	.	ID=FBgn0053057.1.mrna1;Name=FBgn0053057.1;Parent=FBgn0053057.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=683;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	33899409	33900078	99	+	.	ID=FBgn0053057.1.mrna1.exon1;Name=FBgn0053057.1;Parent=FBgn0053057.1.mrna1;Target=FBgn0053057.1 1 670 +
ChrX	stalkie_big_nohaplotig	exon	33903655	33903668	100	+	.	ID=FBgn0053057.1.mrna1.exon2;Name=FBgn0053057.1;Parent=FBgn0053057.1.mrna1;Target=FBgn0053057.1 671 684 +
ChrX	stalkie_big_nohaplotig	CDS	33899409	33900078	99	+	0	ID=FBgn0053057.1.mrna1.cds1;Name=FBgn0053057.1;Parent=FBgn0053057.1.mrna1;Target=FBgn0053057.1 1 670 +
ChrX	stalkie_big_nohaplotig	CDS	33903655	33903668	100	+	1	ID=FBgn0053057.1.mrna1.cds2;Name=FBgn0053057.1;Parent=FBgn0053057.1.mrna1;Target=FBgn0053057.1 671 684 +
Chr2	stalkie_big_nohaplotig	mRNA	113357915	113358415	.	-	.	ID=FBgn0037835.1.mrna1;Name=FBgn0037835.1;Parent=FBgn0037835.1.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=501;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	113357915	113358415	100	-	.	ID=FBgn0037835.1.mrna1.exon1;Name=FBgn0037835.1;Parent=FBgn0037835.1.mrna1;Target=FBgn0037835.1 501 1 .
Chr2	stalkie_big_nohaplotig	CDS	113357915	113358415	100	-	0	ID=FBgn0037835.1.mrna1.cds1;Name=FBgn0037835.1;Parent=FBgn0037835.1.mrna1;Target=FBgn0037835.1 501 1 .
Chr2	stalkie_big_nohaplotig	mRNA	113444784	113447279	.	-	.	ID=FBgn0039290.1.mrna1;Name=FBgn0039290.1;Parent=FBgn0039290.1.path1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=2487;mismatches=9;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	113444784	113447279	99	-	.	ID=FBgn0039290.1.mrna1.exon1;Name=FBgn0039290.1;Parent=FBgn0039290.1.mrna1;Target=FBgn0039290.1 2496 1 .
Chr2	stalkie_big_nohaplotig	CDS	113444784	113447279	99	-	0	ID=FBgn0039290.1.mrna1.cds1;Name=FBgn0039290.1;Parent=FBgn0039290.1.mrna1;Target=FBgn0039290.1 2496 1 .
Chr1	stalkie_big_nohaplotig	mRNA	127117912	127152077	.	+	.	ID=FBgn0260753.1.mrna1;Name=FBgn0260753.1;Parent=FBgn0260753.1.path1;Dir=sensecoverage=100.0;identity=99.4;matches=2316;mismatches=9;indels=4;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	127117912	127118734	99	+	.	ID=FBgn0260753.1.mrna1.exon1;Name=FBgn0260753.1;Parent=FBgn0260753.1.mrna1;Target=FBgn0260753.1 1 823 +
Chr1	stalkie_big_nohaplotig	exon	127130845	127130959	95	+	.	ID=FBgn0260753.1.mrna1.exon2;Name=FBgn0260753.1;Parent=FBgn0260753.1.mrna1;Target=FBgn0260753.1 824 934 +
Chr1	stalkie_big_nohaplotig	exon	127142481	127142623	99	+	.	ID=FBgn0260753.1.mrna1.exon3;Name=FBgn0260753.1;Parent=FBgn0260753.1.mrna1;Target=FBgn0260753.1 935 1077 +
Chr1	stalkie_big_nohaplotig	exon	127143022	127143282	100	+	.	ID=FBgn0260753.1.mrna1.exon4;Name=FBgn0260753.1;Parent=FBgn0260753.1.mrna1;Target=FBgn0260753.1 1078 1338 +
Chr1	stalkie_big_nohaplotig	exon	127147610	127147903	100	+	.	ID=FBgn0260753.1.mrna1.exon5;Name=FBgn0260753.1;Parent=FBgn0260753.1.mrna1;Target=FBgn0260753.1 1339 1632 +
Chr1	stalkie_big_nohaplotig	exon	127147994	127148257	99	+	.	ID=FBgn0260753.1.mrna1.exon6;Name=FBgn0260753.1;Parent=FBgn0260753.1.mrna1;Target=FBgn0260753.1 1633 1896 +
Chr1	stalkie_big_nohaplotig	exon	127151575	127151720	98	+	.	ID=FBgn0260753.1.mrna1.exon7;Name=FBgn0260753.1;Parent=FBgn0260753.1.mrna1;Target=FBgn0260753.1 1897 2042 +
Chr1	stalkie_big_nohaplotig	exon	127151795	127152077	99	+	.	ID=FBgn0260753.1.mrna1.exon8;Name=FBgn0260753.1;Parent=FBgn0260753.1.mrna1;Target=FBgn0260753.1 2043 2325 +
Chr1	stalkie_big_nohaplotig	CDS	127118687	127118734	100	+	0	ID=FBgn0260753.1.mrna1.cds1;Name=FBgn0260753.1;Parent=FBgn0260753.1.mrna1;Target=FBgn0260753.1 776 823 +
Chr1	stalkie_big_nohaplotig	CDS	127130845	127130857	92	+	0	ID=FBgn0260753.1.mrna1.cds2;Name=FBgn0260753.1;Parent=FBgn0260753.1.mrna1;Target=FBgn0260753.1 824 835 +
Chr2	stalkie_big_nohaplotig	mRNA	112806558	112807687	.	+	.	ID=FBgn0039065.1.mrna1;Name=FBgn0039065.1;Parent=FBgn0039065.1.path1;Dir=sensecoverage=100.0;identity=96.4;matches=863;mismatches=9;indels=23;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	112806558	112806746	95	+	.	ID=FBgn0039065.1.mrna1.exon1;Name=FBgn0039065.1;Parent=FBgn0039065.1.mrna1;Target=FBgn0039065.1 1 189 +
Chr2	stalkie_big_nohaplotig	exon	112806808	112806924	82	+	.	ID=FBgn0039065.1.mrna1.exon2;Name=FBgn0039065.1;Parent=FBgn0039065.1.mrna1;Target=FBgn0039065.1 190 315 +
Chr2	stalkie_big_nohaplotig	exon	112807000	112807273	100	+	.	ID=FBgn0039065.1.mrna1.exon3;Name=FBgn0039065.1;Parent=FBgn0039065.1.mrna1;Target=FBgn0039065.1 316 589 +
Chr2	stalkie_big_nohaplotig	exon	112807329	112807539	100	+	.	ID=FBgn0039065.1.mrna1.exon4;Name=FBgn0039065.1;Parent=FBgn0039065.1.mrna1;Target=FBgn0039065.1 590 800 +
Chr2	stalkie_big_nohaplotig	exon	112807600	112807687	100	+	.	ID=FBgn0039065.1.mrna1.exon5;Name=FBgn0039065.1;Parent=FBgn0039065.1.mrna1;Target=FBgn0039065.1 801 888 +
Chr2	stalkie_big_nohaplotig	CDS	112806558	112806746	95	+	0	ID=FBgn0039065.1.mrna1.cds1;Name=FBgn0039065.1;Parent=FBgn0039065.1.mrna1;Target=FBgn0039065.1 1 189 +
Chr2	stalkie_big_nohaplotig	CDS	112806808	112806924	82	+	0	ID=FBgn0039065.1.mrna1.cds2;Name=FBgn0039065.1;Parent=FBgn0039065.1.mrna1;Target=FBgn0039065.1 190 315 +
Chr2	stalkie_big_nohaplotig	CDS	112807000	112807273	100	+	0	ID=FBgn0039065.1.mrna1.cds3;Name=FBgn0039065.1;Parent=FBgn0039065.1.mrna1;Target=FBgn0039065.1 316 589 +
Chr2	stalkie_big_nohaplotig	CDS	112807329	112807539	100	+	1	ID=FBgn0039065.1.mrna1.cds4;Name=FBgn0039065.1;Parent=FBgn0039065.1.mrna1;Target=FBgn0039065.1 590 800 +
Chr2	stalkie_big_nohaplotig	CDS	112807600	112807687	100	+	2	ID=FBgn0039065.1.mrna1.cds5;Name=FBgn0039065.1;Parent=FBgn0039065.1.mrna1;Target=FBgn0039065.1 801 888 +
Chr2	stalkie_big_nohaplotig	mRNA	76250786	76251809	.	+	.	ID=FBgn0038714.1.mrna1;Name=FBgn0038714.1;Parent=FBgn0038714.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=753;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	76250786	76250878	100	+	.	ID=FBgn0038714.1.mrna1.exon1;Name=FBgn0038714.1;Parent=FBgn0038714.1.mrna1;Target=FBgn0038714.1 1 93 +
Chr2	stalkie_big_nohaplotig	exon	76251087	76251231	100	+	.	ID=FBgn0038714.1.mrna1.exon2;Name=FBgn0038714.1;Parent=FBgn0038714.1.mrna1;Target=FBgn0038714.1 94 238 +
Chr2	stalkie_big_nohaplotig	exon	76251295	76251809	100	+	.	ID=FBgn0038714.1.mrna1.exon3;Name=FBgn0038714.1;Parent=FBgn0038714.1.mrna1;Target=FBgn0038714.1 239 753 +
Chr2	stalkie_big_nohaplotig	CDS	76250786	76250878	100	+	0	ID=FBgn0038714.1.mrna1.cds1;Name=FBgn0038714.1;Parent=FBgn0038714.1.mrna1;Target=FBgn0038714.1 1 93 +
Chr2	stalkie_big_nohaplotig	CDS	76251087	76251231	100	+	0	ID=FBgn0038714.1.mrna1.cds2;Name=FBgn0038714.1;Parent=FBgn0038714.1.mrna1;Target=FBgn0038714.1 94 238 +
Chr2	stalkie_big_nohaplotig	CDS	76251295	76251809	100	+	1	ID=FBgn0038714.1.mrna1.cds3;Name=FBgn0038714.1;Parent=FBgn0038714.1.mrna1;Target=FBgn0038714.1 239 753 +
Chr2	stalkie_big_nohaplotig	mRNA	76223811	76225861	.	+	.	ID=FBgn0038720.2.mrna1;Name=FBgn0038720.2;Parent=FBgn0038720.2.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1707;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	76223811	76224140	100	+	.	ID=FBgn0038720.2.mrna1.exon1;Name=FBgn0038720.2;Parent=FBgn0038720.2.mrna1;Target=FBgn0038720.2 1 330 +
Chr2	stalkie_big_nohaplotig	exon	76224248	76224506	100	+	.	ID=FBgn0038720.2.mrna1.exon2;Name=FBgn0038720.2;Parent=FBgn0038720.2.mrna1;Target=FBgn0038720.2 331 589 +
Chr2	stalkie_big_nohaplotig	exon	76224597	76225014	100	+	.	ID=FBgn0038720.2.mrna1.exon3;Name=FBgn0038720.2;Parent=FBgn0038720.2.mrna1;Target=FBgn0038720.2 590 1007 +
Chr2	stalkie_big_nohaplotig	exon	76225091	76225597	100	+	.	ID=FBgn0038720.2.mrna1.exon4;Name=FBgn0038720.2;Parent=FBgn0038720.2.mrna1;Target=FBgn0038720.2 1008 1514 +
Chr2	stalkie_big_nohaplotig	exon	76225669	76225861	100	+	.	ID=FBgn0038720.2.mrna1.exon5;Name=FBgn0038720.2;Parent=FBgn0038720.2.mrna1;Target=FBgn0038720.2 1515 1707 +
Chr2	stalkie_big_nohaplotig	CDS	76223811	76224140	100	+	0	ID=FBgn0038720.2.mrna1.cds1;Name=FBgn0038720.2;Parent=FBgn0038720.2.mrna1;Target=FBgn0038720.2 1 330 +
Chr2	stalkie_big_nohaplotig	CDS	76224248	76224506	100	+	0	ID=FBgn0038720.2.mrna1.cds2;Name=FBgn0038720.2;Parent=FBgn0038720.2.mrna1;Target=FBgn0038720.2 331 589 +
Chr2	stalkie_big_nohaplotig	CDS	76224597	76225014	100	+	1	ID=FBgn0038720.2.mrna1.cds3;Name=FBgn0038720.2;Parent=FBgn0038720.2.mrna1;Target=FBgn0038720.2 590 1007 +
Chr2	stalkie_big_nohaplotig	CDS	76225091	76225597	100	+	2	ID=FBgn0038720.2.mrna1.cds4;Name=FBgn0038720.2;Parent=FBgn0038720.2.mrna1;Target=FBgn0038720.2 1008 1514 +
Chr2	stalkie_big_nohaplotig	CDS	76225669	76225861	100	+	2	ID=FBgn0038720.2.mrna1.cds5;Name=FBgn0038720.2;Parent=FBgn0038720.2.mrna1;Target=FBgn0038720.2 1515 1707 +
Chr2	stalkie_big_nohaplotig	mRNA	76143498	76144839	.	-	.	ID=FBgn0036812.1.mrna1;Name=FBgn0036812.1;Parent=FBgn0036812.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1205;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	76144678	76144839	100	-	.	ID=FBgn0036812.1.mrna1.exon1;Name=FBgn0036812.1;Parent=FBgn0036812.1.mrna1;Target=FBgn0036812.1 1 162 +
Chr2	stalkie_big_nohaplotig	exon	76144356	76144603	100	-	.	ID=FBgn0036812.1.mrna1.exon2;Name=FBgn0036812.1;Parent=FBgn0036812.1.mrna1;Target=FBgn0036812.1 163 410 +
Chr2	stalkie_big_nohaplotig	exon	76143498	76144293	99	-	.	ID=FBgn0036812.1.mrna1.exon3;Name=FBgn0036812.1;Parent=FBgn0036812.1.mrna1;Target=FBgn0036812.1 411 1206 +
Chr2	stalkie_big_nohaplotig	CDS	76144678	76144839	100	-	0	ID=FBgn0036812.1.mrna1.cds1;Name=FBgn0036812.1;Parent=FBgn0036812.1.mrna1;Target=FBgn0036812.1 1 162 +
Chr2	stalkie_big_nohaplotig	CDS	76144356	76144603	100	-	0	ID=FBgn0036812.1.mrna1.cds2;Name=FBgn0036812.1;Parent=FBgn0036812.1.mrna1;Target=FBgn0036812.1 163 410 +
Chr2	stalkie_big_nohaplotig	CDS	76143498	76144293	99	-	2	ID=FBgn0036812.1.mrna1.cds3;Name=FBgn0036812.1;Parent=FBgn0036812.1.mrna1;Target=FBgn0036812.1 411 1206 +
ChrX	stalkie_big_nohaplotig	mRNA	65240906	65241832	.	+	.	ID=FBgn0027496.1.mrna1;Name=FBgn0027496.1;Parent=FBgn0027496.1.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=927;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	65240906	65241832	100	+	.	ID=FBgn0027496.1.mrna1.exon1;Name=FBgn0027496.1;Parent=FBgn0027496.1.mrna1;Target=FBgn0027496.1 927 1 .
ChrX	stalkie_big_nohaplotig	CDS	65240906	65241832	100	+	0	ID=FBgn0027496.1.mrna1.cds1;Name=FBgn0027496.1;Parent=FBgn0027496.1.mrna1;Target=FBgn0027496.1 927 1 .
ChrX	stalkie_big_nohaplotig	mRNA	65242089	65242552	.	-	.	ID=FBgn0031822.1.mrna1;Name=FBgn0031822.1;Parent=FBgn0031822.1.path1;Dir=sensecoverage=99.7;identity=99.7;matches=337;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	65242495	65242552	100	-	.	ID=FBgn0031822.1.mrna1.exon1;Name=FBgn0031822.1;Parent=FBgn0031822.1.mrna1;Target=FBgn0031822.1 1 58 +
ChrX	stalkie_big_nohaplotig	exon	65242238	65242428	100	-	.	ID=FBgn0031822.1.mrna1.exon2;Name=FBgn0031822.1;Parent=FBgn0031822.1.mrna1;Target=FBgn0031822.1 59 249 +
ChrX	stalkie_big_nohaplotig	exon	65242089	65242177	98	-	.	ID=FBgn0031822.1.mrna1.exon3;Name=FBgn0031822.1;Parent=FBgn0031822.1.mrna1;Target=FBgn0031822.1 250 338 +
ChrX	stalkie_big_nohaplotig	CDS	65242495	65242552	100	-	0	ID=FBgn0031822.1.mrna1.cds1;Name=FBgn0031822.1;Parent=FBgn0031822.1.mrna1;Target=FBgn0031822.1 1 58 +
ChrX	stalkie_big_nohaplotig	CDS	65242238	65242428	100	-	1	ID=FBgn0031822.1.mrna1.cds2;Name=FBgn0031822.1;Parent=FBgn0031822.1.mrna1;Target=FBgn0031822.1 59 249 +
ChrX	stalkie_big_nohaplotig	CDS	65242091	65242177	98	-	0	ID=FBgn0031822.1.mrna1.cds3;Name=FBgn0031822.1;Parent=FBgn0031822.1.mrna1;Target=FBgn0031822.1 250 336 +
ChrX	stalkie_big_nohaplotig	mRNA	65095782	65097672	.	+	.	ID=AGAP013326.1.mrna1;Name=AGAP013326.1;Parent=AGAP013326.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1193;mismatches=0;indels=0;unknowns=1
ChrX	stalkie_big_nohaplotig	exon	65095782	65095850	100	+	.	ID=AGAP013326.1.mrna1.exon1;Name=AGAP013326.1;Parent=AGAP013326.1.mrna1;Target=AGAP013326.1 1 69 +
ChrX	stalkie_big_nohaplotig	exon	65095907	65095967	100	+	.	ID=AGAP013326.1.mrna1.exon2;Name=AGAP013326.1;Parent=AGAP013326.1.mrna1;Target=AGAP013326.1 70 130 +
ChrX	stalkie_big_nohaplotig	exon	65096018	65096581	100	+	.	ID=AGAP013326.1.mrna1.exon3;Name=AGAP013326.1;Parent=AGAP013326.1.mrna1;Target=AGAP013326.1 131 694 +
ChrX	stalkie_big_nohaplotig	exon	65097111	65097326	100	+	.	ID=AGAP013326.1.mrna1.exon4;Name=AGAP013326.1;Parent=AGAP013326.1.mrna1;Target=AGAP013326.1 695 910 +
ChrX	stalkie_big_nohaplotig	exon	65097389	65097672	100	+	.	ID=AGAP013326.1.mrna1.exon5;Name=AGAP013326.1;Parent=AGAP013326.1.mrna1;Target=AGAP013326.1 911 1194 +
ChrX	stalkie_big_nohaplotig	CDS	65095782	65095850	100	+	0	ID=AGAP013326.1.mrna1.cds1;Name=AGAP013326.1;Parent=AGAP013326.1.mrna1;Target=AGAP013326.1 1 69 +
ChrX	stalkie_big_nohaplotig	CDS	65095907	65095967	100	+	0	ID=AGAP013326.1.mrna1.cds2;Name=AGAP013326.1;Parent=AGAP013326.1.mrna1;Target=AGAP013326.1 70 130 +
ChrX	stalkie_big_nohaplotig	CDS	65096018	65096581	100	+	1	ID=AGAP013326.1.mrna1.cds3;Name=AGAP013326.1;Parent=AGAP013326.1.mrna1;Target=AGAP013326.1 131 694 +
ChrX	stalkie_big_nohaplotig	CDS	65097111	65097326	100	+	1	ID=AGAP013326.1.mrna1.cds4;Name=AGAP013326.1;Parent=AGAP013326.1.mrna1;Target=AGAP013326.1 695 910 +
ChrX	stalkie_big_nohaplotig	CDS	65097389	65097672	100	+	1	ID=AGAP013326.1.mrna1.cds5;Name=AGAP013326.1;Parent=AGAP013326.1.mrna1;Target=AGAP013326.1 911 1194 +
ChrX	stalkie_big_nohaplotig	mRNA	39457178	39471101	.	-	.	ID=FBgn0011202.1.mrna1;Name=FBgn0011202.1;Parent=FBgn0011202.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3289;mismatches=0;indels=0;unknowns=2
ChrX	stalkie_big_nohaplotig	exon	39471076	39471101	100	-	.	ID=FBgn0011202.1.mrna1.exon1;Name=FBgn0011202.1;Parent=FBgn0011202.1.mrna1;Target=FBgn0011202.1 1 26 +
ChrX	stalkie_big_nohaplotig	exon	39464536	39464837	100	-	.	ID=FBgn0011202.1.mrna1.exon2;Name=FBgn0011202.1;Parent=FBgn0011202.1.mrna1;Target=FBgn0011202.1 27 328 +
ChrX	stalkie_big_nohaplotig	exon	39458319	39460286	100	-	.	ID=FBgn0011202.1.mrna1.exon3;Name=FBgn0011202.1;Parent=FBgn0011202.1.mrna1;Target=FBgn0011202.1 329 2296 +
ChrX	stalkie_big_nohaplotig	exon	39457715	39458245	100	-	.	ID=FBgn0011202.1.mrna1.exon4;Name=FBgn0011202.1;Parent=FBgn0011202.1.mrna1;Target=FBgn0011202.1 2297 2827 +
ChrX	stalkie_big_nohaplotig	exon	39457178	39457641	100	-	.	ID=FBgn0011202.1.mrna1.exon5;Name=FBgn0011202.1;Parent=FBgn0011202.1.mrna1;Target=FBgn0011202.1 2828 3291 +
ChrX	stalkie_big_nohaplotig	CDS	39471076	39471101	100	-	0	ID=FBgn0011202.1.mrna1.cds1;Name=FBgn0011202.1;Parent=FBgn0011202.1.mrna1;Target=FBgn0011202.1 1 26 +
ChrX	stalkie_big_nohaplotig	CDS	39464536	39464837	100	-	2	ID=FBgn0011202.1.mrna1.cds2;Name=FBgn0011202.1;Parent=FBgn0011202.1.mrna1;Target=FBgn0011202.1 27 328 +
ChrX	stalkie_big_nohaplotig	CDS	39458319	39460286	100	-	1	ID=FBgn0011202.1.mrna1.cds3;Name=FBgn0011202.1;Parent=FBgn0011202.1.mrna1;Target=FBgn0011202.1 329 2296 +
ChrX	stalkie_big_nohaplotig	CDS	39457715	39458245	100	-	1	ID=FBgn0011202.1.mrna1.cds4;Name=FBgn0011202.1;Parent=FBgn0011202.1.mrna1;Target=FBgn0011202.1 2297 2827 +
ChrX	stalkie_big_nohaplotig	CDS	39457178	39457641	100	-	1	ID=FBgn0011202.1.mrna1.cds5;Name=FBgn0011202.1;Parent=FBgn0011202.1.mrna1;Target=FBgn0011202.1 2828 3291 +
ChrX	stalkie_big_nohaplotig	mRNA	39377747	39432297	.	-	.	ID=FBgn0000251.1.mrna1;Name=FBgn0000251.1;Parent=FBgn0000251.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1179;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	39431598	39432297	100	-	.	ID=FBgn0000251.1.mrna1.exon1;Name=FBgn0000251.1;Parent=FBgn0000251.1.mrna1;Target=FBgn0000251.1 1 700 +
ChrX	stalkie_big_nohaplotig	exon	39377747	39378225	100	-	.	ID=FBgn0000251.1.mrna1.exon2;Name=FBgn0000251.1;Parent=FBgn0000251.1.mrna1;Target=FBgn0000251.1 701 1179 +
ChrX	stalkie_big_nohaplotig	CDS	39431598	39432297	100	-	0	ID=FBgn0000251.1.mrna1.cds1;Name=FBgn0000251.1;Parent=FBgn0000251.1.mrna1;Target=FBgn0000251.1 1 700 +
ChrX	stalkie_big_nohaplotig	CDS	39377747	39378225	100	-	1	ID=FBgn0000251.1.mrna1.cds2;Name=FBgn0000251.1;Parent=FBgn0000251.1.mrna1;Target=FBgn0000251.1 701 1179 +
Chr2	stalkie_big_nohaplotig	mRNA	51170427	51292329	.	-	.	ID=ORF290.mrna1;Name=ORF290;Parent=ORF290.path1;Dir=sensecoverage=100.0;identity=99.5;matches=2125;mismatches=5;indels=6;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	51292275	51292329	100	-	.	ID=ORF290.mrna1.exon1;Name=ORF290;Parent=ORF290.mrna1;Target=ORF290 1 55 +
Chr2	stalkie_big_nohaplotig	exon	51185616	51185924	99	-	.	ID=ORF290.mrna1.exon2;Name=ORF290;Parent=ORF290.mrna1;Target=ORF290 56 364 +
Chr2	stalkie_big_nohaplotig	exon	51183315	51183391	100	-	.	ID=ORF290.mrna1.exon3;Name=ORF290;Parent=ORF290.mrna1;Target=ORF290 365 441 +
Chr2	stalkie_big_nohaplotig	exon	51182040	51182758	99	-	.	ID=ORF290.mrna1.exon4;Name=ORF290;Parent=ORF290.mrna1;Target=ORF290 442 1154 +
Chr2	stalkie_big_nohaplotig	exon	51173462	51173828	99	-	.	ID=ORF290.mrna1.exon5;Name=ORF290;Parent=ORF290.mrna1;Target=ORF290 1155 1521 +
Chr2	stalkie_big_nohaplotig	exon	51170427	51171035	99	-	.	ID=ORF290.mrna1.exon6;Name=ORF290;Parent=ORF290.mrna1;Target=ORF290 1522 2130 +
Chr2	stalkie_big_nohaplotig	CDS	51292275	51292329	100	-	0	ID=ORF290.mrna1.cds1;Name=ORF290;Parent=ORF290.mrna1;Target=ORF290 1 55 +
Chr2	stalkie_big_nohaplotig	CDS	51185616	51185924	99	-	1	ID=ORF290.mrna1.cds2;Name=ORF290;Parent=ORF290.mrna1;Target=ORF290 56 364 +
Chr2	stalkie_big_nohaplotig	CDS	51183315	51183391	100	-	1	ID=ORF290.mrna1.cds3;Name=ORF290;Parent=ORF290.mrna1;Target=ORF290 365 441 +
Chr2	stalkie_big_nohaplotig	CDS	51182040	51182758	99	-	0	ID=ORF290.mrna1.cds4;Name=ORF290;Parent=ORF290.mrna1;Target=ORF290 442 1154 +
Chr2	stalkie_big_nohaplotig	CDS	51173462	51173828	99	-	2	ID=ORF290.mrna1.cds5;Name=ORF290;Parent=ORF290.mrna1;Target=ORF290 1155 1521 +
Chr2	stalkie_big_nohaplotig	CDS	51170427	51171035	99	-	0	ID=ORF290.mrna1.cds6;Name=ORF290;Parent=ORF290.mrna1;Target=ORF290 1522 2130 +
Chr2	stalkie_big_nohaplotig	mRNA	51226690	51231212	.	+	.	ID=FBgn0015039.2.mrna1;Name=FBgn0015039.2;Parent=FBgn0015039.2.path1;Dir=sensecoverage=99.9;identity=98.9;matches=1399;mismatches=15;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	51226690	51226961	98	+	.	ID=FBgn0015039.2.mrna1.exon1;Name=FBgn0015039.2;Parent=FBgn0015039.2.mrna1;Target=FBgn0015039.2 1 272 +
Chr2	stalkie_big_nohaplotig	exon	51229988	51230489	98	+	.	ID=FBgn0015039.2.mrna1.exon2;Name=FBgn0015039.2;Parent=FBgn0015039.2.mrna1;Target=FBgn0015039.2 273 774 +
Chr2	stalkie_big_nohaplotig	exon	51230573	51231212	99	+	.	ID=FBgn0015039.2.mrna1.exon3;Name=FBgn0015039.2;Parent=FBgn0015039.2.mrna1;Target=FBgn0015039.2 775 1414 +
Chr2	stalkie_big_nohaplotig	CDS	51226690	51226961	98	+	0	ID=FBgn0015039.2.mrna1.cds1;Name=FBgn0015039.2;Parent=FBgn0015039.2.mrna1;Target=FBgn0015039.2 1 272 +
Chr2	stalkie_big_nohaplotig	CDS	51229988	51230489	98	+	2	ID=FBgn0015039.2.mrna1.cds2;Name=FBgn0015039.2;Parent=FBgn0015039.2.mrna1;Target=FBgn0015039.2 273 774 +
Chr2	stalkie_big_nohaplotig	CDS	51230573	51231211	99	+	0	ID=FBgn0015039.2.mrna1.cds3;Name=FBgn0015039.2;Parent=FBgn0015039.2.mrna1;Target=FBgn0015039.2 775 1413 +
Chr2	stalkie_big_nohaplotig	mRNA	51331885	51334032	.	-	.	ID=FBgn0015039.3.mrna1;Name=FBgn0015039.3;Parent=FBgn0015039.3.path1;Dir=sensecoverage=100.0;identity=98.9;matches=1275;mismatches=12;indels=2;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	51333792	51334032	98	-	.	ID=FBgn0015039.3.mrna1.exon1;Name=FBgn0015039.3;Parent=FBgn0015039.3.mrna1;Target=FBgn0015039.3 1 239 +
Chr2	stalkie_big_nohaplotig	exon	51333233	51333731	99	-	.	ID=FBgn0015039.3.mrna1.exon2;Name=FBgn0015039.3;Parent=FBgn0015039.3.mrna1;Target=FBgn0015039.3 240 738 +
Chr2	stalkie_big_nohaplotig	exon	51331885	51332433	98	-	.	ID=FBgn0015039.3.mrna1.exon3;Name=FBgn0015039.3;Parent=FBgn0015039.3.mrna1;Target=FBgn0015039.3 739 1287 +
Chr2	stalkie_big_nohaplotig	CDS	51333792	51333997	99	-	0	ID=FBgn0015039.3.mrna1.cds1;Name=FBgn0015039.3;Parent=FBgn0015039.3.mrna1;Target=FBgn0015039.3 34 239 +
Chr2	stalkie_big_nohaplotig	CDS	51333233	51333731	99	-	2	ID=FBgn0015039.3.mrna1.cds2;Name=FBgn0015039.3;Parent=FBgn0015039.3.mrna1;Target=FBgn0015039.3 240 738 +
Chr2	stalkie_big_nohaplotig	CDS	51331885	51332433	98	-	0	ID=FBgn0015039.3.mrna1.cds3;Name=FBgn0015039.3;Parent=FBgn0015039.3.mrna1;Target=FBgn0015039.3 739 1287 +
Chr2	stalkie_big_nohaplotig	mRNA	56583230	56603503	.	+	.	ID=FBgn0005624.1.mrna1;Name=FBgn0005624.1;Parent=FBgn0005624.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=3943;mismatches=1;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	56583230	56583707	100	+	.	ID=FBgn0005624.1.mrna1.exon1;Name=FBgn0005624.1;Parent=FBgn0005624.1.mrna1;Target=FBgn0005624.1 1 478 +
Chr2	stalkie_big_nohaplotig	exon	56591721	56591811	100	+	.	ID=FBgn0005624.1.mrna1.exon2;Name=FBgn0005624.1;Parent=FBgn0005624.1.mrna1;Target=FBgn0005624.1 479 569 +
Chr2	stalkie_big_nohaplotig	exon	56599999	56600202	100	+	.	ID=FBgn0005624.1.mrna1.exon3;Name=FBgn0005624.1;Parent=FBgn0005624.1.mrna1;Target=FBgn0005624.1 570 773 +
Chr2	stalkie_big_nohaplotig	exon	56600333	56603503	99	+	.	ID=FBgn0005624.1.mrna1.exon4;Name=FBgn0005624.1;Parent=FBgn0005624.1.mrna1;Target=FBgn0005624.1 774 3945 +
Chr2	stalkie_big_nohaplotig	CDS	56583230	56583707	100	+	0	ID=FBgn0005624.1.mrna1.cds1;Name=FBgn0005624.1;Parent=FBgn0005624.1.mrna1;Target=FBgn0005624.1 1 478 +
Chr2	stalkie_big_nohaplotig	CDS	56591721	56591811	100	+	1	ID=FBgn0005624.1.mrna1.cds2;Name=FBgn0005624.1;Parent=FBgn0005624.1.mrna1;Target=FBgn0005624.1 479 569 +
Chr2	stalkie_big_nohaplotig	CDS	56599999	56600202	100	+	2	ID=FBgn0005624.1.mrna1.cds3;Name=FBgn0005624.1;Parent=FBgn0005624.1.mrna1;Target=FBgn0005624.1 570 773 +
Chr2	stalkie_big_nohaplotig	CDS	56600333	56603503	99	+	2	ID=FBgn0005624.1.mrna1.cds4;Name=FBgn0005624.1;Parent=FBgn0005624.1.mrna1;Target=FBgn0005624.1 774 3945 +
ChrX	stalkie_big_nohaplotig	mRNA	27223262	27262373	.	-	.	ID=FBgn0041150.2.mrna1;Name=FBgn0041150.2;Parent=FBgn0041150.2.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2402;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	27262321	27262373	100	-	.	ID=FBgn0041150.2.mrna1.exon1;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 1 53 +
ChrX	stalkie_big_nohaplotig	exon	27234905	27235011	100	-	.	ID=FBgn0041150.2.mrna1.exon2;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 54 160 +
ChrX	stalkie_big_nohaplotig	exon	27229374	27229515	100	-	.	ID=FBgn0041150.2.mrna1.exon3;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 161 302 +
ChrX	stalkie_big_nohaplotig	exon	27228834	27228891	100	-	.	ID=FBgn0041150.2.mrna1.exon4;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 303 360 +
ChrX	stalkie_big_nohaplotig	exon	27228610	27228748	99	-	.	ID=FBgn0041150.2.mrna1.exon5;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 361 499 +
ChrX	stalkie_big_nohaplotig	exon	27227890	27228536	100	-	.	ID=FBgn0041150.2.mrna1.exon6;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 500 1146 +
ChrX	stalkie_big_nohaplotig	exon	27227074	27227328	100	-	.	ID=FBgn0041150.2.mrna1.exon7;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 1147 1401 +
ChrX	stalkie_big_nohaplotig	exon	27226506	27226835	100	-	.	ID=FBgn0041150.2.mrna1.exon8;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 1402 1731 +
ChrX	stalkie_big_nohaplotig	exon	27226089	27226436	100	-	.	ID=FBgn0041150.2.mrna1.exon9;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 1732 2079 +
ChrX	stalkie_big_nohaplotig	exon	27225465	27225612	100	-	.	ID=FBgn0041150.2.mrna1.exon10;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 2080 2227 +
ChrX	stalkie_big_nohaplotig	exon	27225288	27225381	100	-	.	ID=FBgn0041150.2.mrna1.exon11;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 2228 2321 +
ChrX	stalkie_big_nohaplotig	exon	27223262	27223343	100	-	.	ID=FBgn0041150.2.mrna1.exon12;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 2322 2403 +
ChrX	stalkie_big_nohaplotig	CDS	27262321	27262373	100	-	0	ID=FBgn0041150.2.mrna1.cds1;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 1 53 +
ChrX	stalkie_big_nohaplotig	CDS	27234905	27235011	100	-	2	ID=FBgn0041150.2.mrna1.cds2;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 54 160 +
ChrX	stalkie_big_nohaplotig	CDS	27229374	27229515	100	-	1	ID=FBgn0041150.2.mrna1.cds3;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 161 302 +
ChrX	stalkie_big_nohaplotig	CDS	27228834	27228891	100	-	2	ID=FBgn0041150.2.mrna1.cds4;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 303 360 +
ChrX	stalkie_big_nohaplotig	CDS	27228610	27228748	99	-	0	ID=FBgn0041150.2.mrna1.cds5;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 361 499 +
ChrX	stalkie_big_nohaplotig	CDS	27227890	27228536	100	-	1	ID=FBgn0041150.2.mrna1.cds6;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 500 1146 +
ChrX	stalkie_big_nohaplotig	CDS	27227074	27227328	100	-	0	ID=FBgn0041150.2.mrna1.cds7;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 1147 1401 +
ChrX	stalkie_big_nohaplotig	CDS	27226506	27226835	100	-	0	ID=FBgn0041150.2.mrna1.cds8;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 1402 1731 +
ChrX	stalkie_big_nohaplotig	CDS	27226089	27226436	100	-	0	ID=FBgn0041150.2.mrna1.cds9;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 1732 2079 +
ChrX	stalkie_big_nohaplotig	CDS	27225465	27225612	100	-	0	ID=FBgn0041150.2.mrna1.cds10;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 2080 2227 +
ChrX	stalkie_big_nohaplotig	CDS	27225288	27225381	100	-	1	ID=FBgn0041150.2.mrna1.cds11;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 2228 2321 +
ChrX	stalkie_big_nohaplotig	CDS	27223262	27223343	100	-	2	ID=FBgn0041150.2.mrna1.cds12;Name=FBgn0041150.2;Parent=FBgn0041150.2.mrna1;Target=FBgn0041150.2 2322 2403 +
Chr2	stalkie_big_nohaplotig	mRNA	55313429	55342634	.	+	.	ID=FBgn0034045.1.mrna1;Name=FBgn0034045.1;Parent=FBgn0034045.1.path1;Dir=sensecoverage=99.7;identity=96.6;matches=1489;mismatches=52;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	55313429	55313686	100	+	.	ID=FBgn0034045.1.mrna1.exon1;Name=FBgn0034045.1;Parent=FBgn0034045.1.mrna1;Target=FBgn0034045.1 5 262 +
Chr2	stalkie_big_nohaplotig	exon	55314355	55314546	99	+	.	ID=FBgn0034045.1.mrna1.exon2;Name=FBgn0034045.1;Parent=FBgn0034045.1.mrna1;Target=FBgn0034045.1 263 454 +
Chr2	stalkie_big_nohaplotig	exon	55314605	55314722	99	+	.	ID=FBgn0034045.1.mrna1.exon3;Name=FBgn0034045.1;Parent=FBgn0034045.1.mrna1;Target=FBgn0034045.1 455 572 +
Chr2	stalkie_big_nohaplotig	exon	55330897	55331044	99	+	.	ID=FBgn0034045.1.mrna1.exon4;Name=FBgn0034045.1;Parent=FBgn0034045.1.mrna1;Target=FBgn0034045.1 573 720 +
Chr2	stalkie_big_nohaplotig	exon	55341749	55341791	97	+	.	ID=FBgn0034045.1.mrna1.exon5;Name=FBgn0034045.1;Parent=FBgn0034045.1.mrna1;Target=FBgn0034045.1 721 763 +
Chr2	stalkie_big_nohaplotig	exon	55341853	55342634	93	+	.	ID=FBgn0034045.1.mrna1.exon6;Name=FBgn0034045.1;Parent=FBgn0034045.1.mrna1;Target=FBgn0034045.1 764 1545 +
Chr2	stalkie_big_nohaplotig	CDS	55313431	55313686	100	+	0	ID=FBgn0034045.1.mrna1.cds1;Name=FBgn0034045.1;Parent=FBgn0034045.1.mrna1;Target=FBgn0034045.1 7 262 +
Chr2	stalkie_big_nohaplotig	CDS	55314355	55314546	99	+	1	ID=FBgn0034045.1.mrna1.cds2;Name=FBgn0034045.1;Parent=FBgn0034045.1.mrna1;Target=FBgn0034045.1 263 454 +
Chr2	stalkie_big_nohaplotig	CDS	55314605	55314722	99	+	1	ID=FBgn0034045.1.mrna1.cds3;Name=FBgn0034045.1;Parent=FBgn0034045.1.mrna1;Target=FBgn0034045.1 455 572 +
Chr2	stalkie_big_nohaplotig	CDS	55330897	55331044	99	+	2	ID=FBgn0034045.1.mrna1.cds4;Name=FBgn0034045.1;Parent=FBgn0034045.1.mrna1;Target=FBgn0034045.1 573 720 +
Chr2	stalkie_big_nohaplotig	CDS	55341749	55341791	97	+	0	ID=FBgn0034045.1.mrna1.cds5;Name=FBgn0034045.1;Parent=FBgn0034045.1.mrna1;Target=FBgn0034045.1 721 763 +
Chr2	stalkie_big_nohaplotig	CDS	55341853	55342634	93	+	1	ID=FBgn0034045.1.mrna1.cds6;Name=FBgn0034045.1;Parent=FBgn0034045.1.mrna1;Target=FBgn0034045.1 764 1545 +
ChrX	stalkie_big_nohaplotig	mRNA	61533373	61537810	.	+	.	ID=FBgn0031903.1.mrna1;Name=FBgn0031903.1;Parent=FBgn0031903.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1200;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	61533373	61533549	100	+	.	ID=FBgn0031903.1.mrna1.exon1;Name=FBgn0031903.1;Parent=FBgn0031903.1.mrna1;Target=FBgn0031903.1 1 177 +
ChrX	stalkie_big_nohaplotig	exon	61533632	61533710	100	+	.	ID=FBgn0031903.1.mrna1.exon2;Name=FBgn0031903.1;Parent=FBgn0031903.1.mrna1;Target=FBgn0031903.1 178 256 +
ChrX	stalkie_big_nohaplotig	exon	61535790	61536172	100	+	.	ID=FBgn0031903.1.mrna1.exon3;Name=FBgn0031903.1;Parent=FBgn0031903.1.mrna1;Target=FBgn0031903.1 257 639 +
ChrX	stalkie_big_nohaplotig	exon	61536224	61536599	100	+	.	ID=FBgn0031903.1.mrna1.exon4;Name=FBgn0031903.1;Parent=FBgn0031903.1.mrna1;Target=FBgn0031903.1 640 1015 +
ChrX	stalkie_big_nohaplotig	exon	61537626	61537810	100	+	.	ID=FBgn0031903.1.mrna1.exon5;Name=FBgn0031903.1;Parent=FBgn0031903.1.mrna1;Target=FBgn0031903.1 1016 1200 +
ChrX	stalkie_big_nohaplotig	CDS	61533373	61533549	100	+	0	ID=FBgn0031903.1.mrna1.cds1;Name=FBgn0031903.1;Parent=FBgn0031903.1.mrna1;Target=FBgn0031903.1 1 177 +
ChrX	stalkie_big_nohaplotig	CDS	61533632	61533710	100	+	0	ID=FBgn0031903.1.mrna1.cds2;Name=FBgn0031903.1;Parent=FBgn0031903.1.mrna1;Target=FBgn0031903.1 178 256 +
ChrX	stalkie_big_nohaplotig	CDS	61535790	61536172	100	+	1	ID=FBgn0031903.1.mrna1.cds3;Name=FBgn0031903.1;Parent=FBgn0031903.1.mrna1;Target=FBgn0031903.1 257 639 +
ChrX	stalkie_big_nohaplotig	CDS	61536224	61536599	100	+	0	ID=FBgn0031903.1.mrna1.cds4;Name=FBgn0031903.1;Parent=FBgn0031903.1.mrna1;Target=FBgn0031903.1 640 1015 +
ChrX	stalkie_big_nohaplotig	CDS	61537626	61537810	100	+	1	ID=FBgn0031903.1.mrna1.cds5;Name=FBgn0031903.1;Parent=FBgn0031903.1.mrna1;Target=FBgn0031903.1 1016 1200 +
ChrX	stalkie_big_nohaplotig	mRNA	61460926	61468002	.	+	.	ID=FBgn0032499.1.mrna1;Name=FBgn0032499.1;Parent=FBgn0032499.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2070;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	61460926	61461305	100	+	.	ID=FBgn0032499.1.mrna1.exon1;Name=FBgn0032499.1;Parent=FBgn0032499.1.mrna1;Target=FBgn0032499.1 1 380 +
ChrX	stalkie_big_nohaplotig	exon	61461369	61462493	100	+	.	ID=FBgn0032499.1.mrna1.exon2;Name=FBgn0032499.1;Parent=FBgn0032499.1.mrna1;Target=FBgn0032499.1 381 1505 +
ChrX	stalkie_big_nohaplotig	exon	61462564	61462635	100	+	.	ID=FBgn0032499.1.mrna1.exon3;Name=FBgn0032499.1;Parent=FBgn0032499.1.mrna1;Target=FBgn0032499.1 1506 1577 +
ChrX	stalkie_big_nohaplotig	exon	61464514	61464891	100	+	.	ID=FBgn0032499.1.mrna1.exon4;Name=FBgn0032499.1;Parent=FBgn0032499.1.mrna1;Target=FBgn0032499.1 1578 1955 +
ChrX	stalkie_big_nohaplotig	exon	61467888	61468002	100	+	.	ID=FBgn0032499.1.mrna1.exon5;Name=FBgn0032499.1;Parent=FBgn0032499.1.mrna1;Target=FBgn0032499.1 1956 2070 +
ChrX	stalkie_big_nohaplotig	CDS	61460926	61461305	100	+	0	ID=FBgn0032499.1.mrna1.cds1;Name=FBgn0032499.1;Parent=FBgn0032499.1.mrna1;Target=FBgn0032499.1 1 380 +
ChrX	stalkie_big_nohaplotig	CDS	61461369	61462493	100	+	2	ID=FBgn0032499.1.mrna1.cds2;Name=FBgn0032499.1;Parent=FBgn0032499.1.mrna1;Target=FBgn0032499.1 381 1505 +
ChrX	stalkie_big_nohaplotig	CDS	61462564	61462635	100	+	2	ID=FBgn0032499.1.mrna1.cds3;Name=FBgn0032499.1;Parent=FBgn0032499.1.mrna1;Target=FBgn0032499.1 1506 1577 +
ChrX	stalkie_big_nohaplotig	CDS	61464514	61464891	100	+	2	ID=FBgn0032499.1.mrna1.cds4;Name=FBgn0032499.1;Parent=FBgn0032499.1.mrna1;Target=FBgn0032499.1 1578 1955 +
ChrX	stalkie_big_nohaplotig	CDS	61467888	61468002	100	+	2	ID=FBgn0032499.1.mrna1.cds5;Name=FBgn0032499.1;Parent=FBgn0032499.1.mrna1;Target=FBgn0032499.1 1956 2070 +
ChrX	stalkie_big_nohaplotig	mRNA	61341805	61352887	.	-	.	ID=FBgn0031904.1.mrna1;Name=FBgn0031904.1;Parent=FBgn0031904.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1365;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	61352732	61352887	100	-	.	ID=FBgn0031904.1.mrna1.exon1;Name=FBgn0031904.1;Parent=FBgn0031904.1.mrna1;Target=FBgn0031904.1 1 156 +
ChrX	stalkie_big_nohaplotig	exon	61348078	61348296	100	-	.	ID=FBgn0031904.1.mrna1.exon2;Name=FBgn0031904.1;Parent=FBgn0031904.1.mrna1;Target=FBgn0031904.1 157 375 +
ChrX	stalkie_big_nohaplotig	exon	61347690	61348005	100	-	.	ID=FBgn0031904.1.mrna1.exon3;Name=FBgn0031904.1;Parent=FBgn0031904.1.mrna1;Target=FBgn0031904.1 376 691 +
ChrX	stalkie_big_nohaplotig	exon	61347371	61347628	100	-	.	ID=FBgn0031904.1.mrna1.exon4;Name=FBgn0031904.1;Parent=FBgn0031904.1.mrna1;Target=FBgn0031904.1 692 949 +
ChrX	stalkie_big_nohaplotig	exon	61346073	61346191	100	-	.	ID=FBgn0031904.1.mrna1.exon5;Name=FBgn0031904.1;Parent=FBgn0031904.1.mrna1;Target=FBgn0031904.1 950 1068 +
ChrX	stalkie_big_nohaplotig	exon	61345825	61346013	100	-	.	ID=FBgn0031904.1.mrna1.exon6;Name=FBgn0031904.1;Parent=FBgn0031904.1.mrna1;Target=FBgn0031904.1 1069 1257 +
ChrX	stalkie_big_nohaplotig	exon	61341805	61341912	100	-	.	ID=FBgn0031904.1.mrna1.exon7;Name=FBgn0031904.1;Parent=FBgn0031904.1.mrna1;Target=FBgn0031904.1 1258 1365 +
ChrX	stalkie_big_nohaplotig	CDS	61352732	61352887	100	-	0	ID=FBgn0031904.1.mrna1.cds1;Name=FBgn0031904.1;Parent=FBgn0031904.1.mrna1;Target=FBgn0031904.1 1 156 +
ChrX	stalkie_big_nohaplotig	CDS	61348078	61348296	100	-	0	ID=FBgn0031904.1.mrna1.cds2;Name=FBgn0031904.1;Parent=FBgn0031904.1.mrna1;Target=FBgn0031904.1 157 375 +
ChrX	stalkie_big_nohaplotig	CDS	61347690	61348005	100	-	0	ID=FBgn0031904.1.mrna1.cds3;Name=FBgn0031904.1;Parent=FBgn0031904.1.mrna1;Target=FBgn0031904.1 376 691 +
ChrX	stalkie_big_nohaplotig	CDS	61347371	61347628	100	-	1	ID=FBgn0031904.1.mrna1.cds4;Name=FBgn0031904.1;Parent=FBgn0031904.1.mrna1;Target=FBgn0031904.1 692 949 +
ChrX	stalkie_big_nohaplotig	CDS	61346073	61346191	100	-	1	ID=FBgn0031904.1.mrna1.cds5;Name=FBgn0031904.1;Parent=FBgn0031904.1.mrna1;Target=FBgn0031904.1 950 1068 +
ChrX	stalkie_big_nohaplotig	CDS	61345825	61346013	100	-	0	ID=FBgn0031904.1.mrna1.cds6;Name=FBgn0031904.1;Parent=FBgn0031904.1.mrna1;Target=FBgn0031904.1 1069 1257 +
ChrX	stalkie_big_nohaplotig	CDS	61341805	61341912	100	-	0	ID=FBgn0031904.1.mrna1.cds7;Name=FBgn0031904.1;Parent=FBgn0031904.1.mrna1;Target=FBgn0031904.1 1258 1365 +
ChrX	stalkie_big_nohaplotig	mRNA	61591314	61592166	.	-	.	ID=ORF2839.mrna1;Name=ORF2839;Parent=ORF2839.path1;Dir=sensecoverage=100.0;identity=99.7;matches=796;mismatches=2;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	61592077	61592166	100	-	.	ID=ORF2839.mrna1.exon1;Name=ORF2839;Parent=ORF2839.mrna1;Target=ORF2839 1 90 +
ChrX	stalkie_big_nohaplotig	exon	61591314	61592021	99	-	.	ID=ORF2839.mrna1.exon2;Name=ORF2839;Parent=ORF2839.mrna1;Target=ORF2839 91 798 +
ChrX	stalkie_big_nohaplotig	CDS	61592077	61592166	100	-	0	ID=ORF2839.mrna1.cds1;Name=ORF2839;Parent=ORF2839.mrna1;Target=ORF2839 1 90 +
ChrX	stalkie_big_nohaplotig	CDS	61591314	61592021	99	-	0	ID=ORF2839.mrna1.cds2;Name=ORF2839;Parent=ORF2839.mrna1;Target=ORF2839 91 798 +
ChrX	stalkie_big_nohaplotig	mRNA	61575821	61576674	.	-	.	ID=ORF2907.mrna1;Name=ORF2907;Parent=ORF2907.path1;Dir=sensecoverage=100.0;identity=100.0;matches=789;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	61576582	61576674	100	-	.	ID=ORF2907.mrna1.exon1;Name=ORF2907;Parent=ORF2907.mrna1;Target=ORF2907 1 93 +
ChrX	stalkie_big_nohaplotig	exon	61575821	61576516	100	-	.	ID=ORF2907.mrna1.exon2;Name=ORF2907;Parent=ORF2907.mrna1;Target=ORF2907 94 789 +
ChrX	stalkie_big_nohaplotig	CDS	61576582	61576674	100	-	0	ID=ORF2907.mrna1.cds1;Name=ORF2907;Parent=ORF2907.mrna1;Target=ORF2907 1 93 +
ChrX	stalkie_big_nohaplotig	CDS	61575821	61576516	100	-	0	ID=ORF2907.mrna1.cds2;Name=ORF2907;Parent=ORF2907.mrna1;Target=ORF2907 94 789 +
ChrX	stalkie_big_nohaplotig	mRNA	79069753	79289183	.	+	.	ID=FBgn0000464.1.mrna1;Name=FBgn0000464.1;Parent=FBgn0000464.1.path1;Dir=sensecoverage=98.3;identity=100.0;matches=5984;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	79069753	79069884	100	+	.	ID=FBgn0000464.1.mrna1.exon1;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 107 238 +
ChrX	stalkie_big_nohaplotig	exon	79071561	79071722	100	+	.	ID=FBgn0000464.1.mrna1.exon2;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 239 400 +
ChrX	stalkie_big_nohaplotig	exon	79167477	79167656	100	+	.	ID=FBgn0000464.1.mrna1.exon3;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 401 580 +
ChrX	stalkie_big_nohaplotig	exon	79191854	79192090	100	+	.	ID=FBgn0000464.1.mrna1.exon4;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 581 817 +
ChrX	stalkie_big_nohaplotig	exon	79192152	79192298	100	+	.	ID=FBgn0000464.1.mrna1.exon5;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 818 964 +
ChrX	stalkie_big_nohaplotig	exon	79192434	79192567	100	+	.	ID=FBgn0000464.1.mrna1.exon6;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 965 1098 +
ChrX	stalkie_big_nohaplotig	exon	79192644	79192794	100	+	.	ID=FBgn0000464.1.mrna1.exon7;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 1099 1249 +
ChrX	stalkie_big_nohaplotig	exon	79211395	79211495	100	+	.	ID=FBgn0000464.1.mrna1.exon8;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 1250 1350 +
ChrX	stalkie_big_nohaplotig	exon	79224860	79225052	100	+	.	ID=FBgn0000464.1.mrna1.exon9;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 1351 1543 +
ChrX	stalkie_big_nohaplotig	exon	79239930	79240080	100	+	.	ID=FBgn0000464.1.mrna1.exon10;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 1544 1694 +
ChrX	stalkie_big_nohaplotig	exon	79242419	79242555	100	+	.	ID=FBgn0000464.1.mrna1.exon11;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 1695 1831 +
ChrX	stalkie_big_nohaplotig	exon	79254912	79255208	100	+	.	ID=FBgn0000464.1.mrna1.exon12;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 1832 2128 +
ChrX	stalkie_big_nohaplotig	exon	79282662	79282801	100	+	.	ID=FBgn0000464.1.mrna1.exon13;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 2129 2268 +
ChrX	stalkie_big_nohaplotig	exon	79282874	79286212	100	+	.	ID=FBgn0000464.1.mrna1.exon14;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 2269 5607 +
ChrX	stalkie_big_nohaplotig	exon	79288577	79288687	100	+	.	ID=FBgn0000464.1.mrna1.exon15;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 5608 5718 +
ChrX	stalkie_big_nohaplotig	exon	79288743	79289048	100	+	.	ID=FBgn0000464.1.mrna1.exon16;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 5719 6024 +
ChrX	stalkie_big_nohaplotig	exon	79289118	79289183	100	+	.	ID=FBgn0000464.1.mrna1.exon17;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 6025 6090 +
ChrX	stalkie_big_nohaplotig	CDS	79069755	79069884	100	+	0	ID=FBgn0000464.1.mrna1.cds1;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 109 238 +
ChrX	stalkie_big_nohaplotig	CDS	79071561	79071722	100	+	1	ID=FBgn0000464.1.mrna1.cds2;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 239 400 +
ChrX	stalkie_big_nohaplotig	CDS	79167477	79167656	100	+	1	ID=FBgn0000464.1.mrna1.cds3;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 401 580 +
ChrX	stalkie_big_nohaplotig	CDS	79191854	79192090	100	+	1	ID=FBgn0000464.1.mrna1.cds4;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 581 817 +
ChrX	stalkie_big_nohaplotig	CDS	79192152	79192298	100	+	1	ID=FBgn0000464.1.mrna1.cds5;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 818 964 +
ChrX	stalkie_big_nohaplotig	CDS	79192434	79192567	100	+	1	ID=FBgn0000464.1.mrna1.cds6;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 965 1098 +
ChrX	stalkie_big_nohaplotig	CDS	79192644	79192794	100	+	0	ID=FBgn0000464.1.mrna1.cds7;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 1099 1249 +
ChrX	stalkie_big_nohaplotig	CDS	79211395	79211495	100	+	1	ID=FBgn0000464.1.mrna1.cds8;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 1250 1350 +
ChrX	stalkie_big_nohaplotig	CDS	79224860	79225052	100	+	0	ID=FBgn0000464.1.mrna1.cds9;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 1351 1543 +
ChrX	stalkie_big_nohaplotig	CDS	79239930	79240080	100	+	1	ID=FBgn0000464.1.mrna1.cds10;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 1544 1694 +
ChrX	stalkie_big_nohaplotig	CDS	79242419	79242555	100	+	2	ID=FBgn0000464.1.mrna1.cds11;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 1695 1831 +
ChrX	stalkie_big_nohaplotig	CDS	79254912	79255208	100	+	1	ID=FBgn0000464.1.mrna1.cds12;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 1832 2128 +
ChrX	stalkie_big_nohaplotig	CDS	79282662	79282801	100	+	1	ID=FBgn0000464.1.mrna1.cds13;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 2129 2268 +
ChrX	stalkie_big_nohaplotig	CDS	79282874	79286212	100	+	0	ID=FBgn0000464.1.mrna1.cds14;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 2269 5607 +
ChrX	stalkie_big_nohaplotig	CDS	79288577	79288687	100	+	0	ID=FBgn0000464.1.mrna1.cds15;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 5608 5718 +
ChrX	stalkie_big_nohaplotig	CDS	79288743	79289048	100	+	0	ID=FBgn0000464.1.mrna1.cds16;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 5719 6024 +
ChrX	stalkie_big_nohaplotig	CDS	79289118	79289183	100	+	0	ID=FBgn0000464.1.mrna1.cds17;Name=FBgn0000464.1;Parent=FBgn0000464.1.mrna1;Target=FBgn0000464.1 6025 6090 +
ChrX	stalkie_big_nohaplotig	mRNA	79315315	79329171	.	+	.	ID=FBgn0014019.1.mrna1;Name=FBgn0014019.1;Parent=FBgn0014019.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1166;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	79315315	79315391	100	+	.	ID=FBgn0014019.1.mrna1.exon1;Name=FBgn0014019.1;Parent=FBgn0014019.1.mrna1;Target=FBgn0014019.1 1 77 +
ChrX	stalkie_big_nohaplotig	exon	79315450	79315641	100	+	.	ID=FBgn0014019.1.mrna1.exon2;Name=FBgn0014019.1;Parent=FBgn0014019.1.mrna1;Target=FBgn0014019.1 78 269 +
ChrX	stalkie_big_nohaplotig	exon	79316635	79316850	100	+	.	ID=FBgn0014019.1.mrna1.exon3;Name=FBgn0014019.1;Parent=FBgn0014019.1.mrna1;Target=FBgn0014019.1 270 485 +
ChrX	stalkie_big_nohaplotig	exon	79328408	79328538	100	+	.	ID=FBgn0014019.1.mrna1.exon4;Name=FBgn0014019.1;Parent=FBgn0014019.1.mrna1;Target=FBgn0014019.1 486 616 +
ChrX	stalkie_big_nohaplotig	exon	79328621	79329171	99	+	.	ID=FBgn0014019.1.mrna1.exon5;Name=FBgn0014019.1;Parent=FBgn0014019.1.mrna1;Target=FBgn0014019.1 617 1167 +
ChrX	stalkie_big_nohaplotig	CDS	79315315	79315391	100	+	0	ID=FBgn0014019.1.mrna1.cds1;Name=FBgn0014019.1;Parent=FBgn0014019.1.mrna1;Target=FBgn0014019.1 1 77 +
ChrX	stalkie_big_nohaplotig	CDS	79315450	79315641	100	+	2	ID=FBgn0014019.1.mrna1.cds2;Name=FBgn0014019.1;Parent=FBgn0014019.1.mrna1;Target=FBgn0014019.1 78 269 +
ChrX	stalkie_big_nohaplotig	CDS	79316635	79316850	100	+	2	ID=FBgn0014019.1.mrna1.cds3;Name=FBgn0014019.1;Parent=FBgn0014019.1.mrna1;Target=FBgn0014019.1 270 485 +
ChrX	stalkie_big_nohaplotig	CDS	79328408	79328538	100	+	2	ID=FBgn0014019.1.mrna1.cds4;Name=FBgn0014019.1;Parent=FBgn0014019.1.mrna1;Target=FBgn0014019.1 486 616 +
ChrX	stalkie_big_nohaplotig	CDS	79328621	79329171	99	+	1	ID=FBgn0014019.1.mrna1.cds5;Name=FBgn0014019.1;Parent=FBgn0014019.1.mrna1;Target=FBgn0014019.1 617 1167 +
ChrX	stalkie_big_nohaplotig	mRNA	8822716	8823900	.	-	.	ID=FBgn0020238.3.mrna1;Name=FBgn0020238.3;Parent=FBgn0020238.3.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1184;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	8822716	8823900	99	-	.	ID=FBgn0020238.3.mrna1.exon1;Name=FBgn0020238.3;Parent=FBgn0020238.3.mrna1;Target=FBgn0020238.3 1185 1 .
ChrX	stalkie_big_nohaplotig	CDS	8822716	8823900	99	-	0	ID=FBgn0020238.3.mrna1.cds1;Name=FBgn0020238.3;Parent=FBgn0020238.3.mrna1;Target=FBgn0020238.3 1185 1 .
ChrX	stalkie_big_nohaplotig	mRNA	8831644	8832894	.	-	.	ID=FBgn0020238.5.mrna1;Name=FBgn0020238.5;Parent=FBgn0020238.5.path1;Dir=indeterminatecoverage=98.3;identity=98.0;matches=1232;mismatches=7;indels=18;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	8831644	8832894	98	-	.	ID=FBgn0020238.5.mrna1.exon1;Name=FBgn0020238.5;Parent=FBgn0020238.5.mrna1;Target=FBgn0020238.5 1258 14 .
ChrX	stalkie_big_nohaplotig	CDS	8831645	8832892	98	-	0	ID=FBgn0020238.5.mrna1.cds1;Name=FBgn0020238.5;Parent=FBgn0020238.5.mrna1;Target=FBgn0020238.5 1257 16 .
Chr2	stalkie_big_nohaplotig	mRNA	115480237	115483670	.	+	.	ID=ORF910.mrna1;Name=ORF910;Parent=ORF910.path1;Dir=sensecoverage=100.0;identity=99.4;matches=1345;mismatches=8;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	115480237	115480303	100	+	.	ID=ORF910.mrna1.exon1;Name=ORF910;Parent=ORF910.mrna1;Target=ORF910 1 67 +
Chr2	stalkie_big_nohaplotig	exon	115482301	115482378	100	+	.	ID=ORF910.mrna1.exon2;Name=ORF910;Parent=ORF910.mrna1;Target=ORF910 68 145 +
Chr2	stalkie_big_nohaplotig	exon	115482463	115483670	99	+	.	ID=ORF910.mrna1.exon3;Name=ORF910;Parent=ORF910.mrna1;Target=ORF910 146 1353 +
Chr2	stalkie_big_nohaplotig	CDS	115480237	115480303	100	+	0	ID=ORF910.mrna1.cds1;Name=ORF910;Parent=ORF910.mrna1;Target=ORF910 1 67 +
Chr2	stalkie_big_nohaplotig	CDS	115482301	115482378	100	+	1	ID=ORF910.mrna1.cds2;Name=ORF910;Parent=ORF910.mrna1;Target=ORF910 68 145 +
Chr2	stalkie_big_nohaplotig	CDS	115482463	115483670	99	+	1	ID=ORF910.mrna1.cds3;Name=ORF910;Parent=ORF910.mrna1;Target=ORF910 146 1353 +
ChrX	stalkie_big_nohaplotig	mRNA	74834025	74850069	.	-	.	ID=FBgn0032135.1.mrna1;Name=FBgn0032135.1;Parent=FBgn0032135.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1182;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	74849838	74850069	100	-	.	ID=FBgn0032135.1.mrna1.exon1;Name=FBgn0032135.1;Parent=FBgn0032135.1.mrna1;Target=FBgn0032135.1 1 232 +
ChrX	stalkie_big_nohaplotig	exon	74837203	74837478	100	-	.	ID=FBgn0032135.1.mrna1.exon2;Name=FBgn0032135.1;Parent=FBgn0032135.1.mrna1;Target=FBgn0032135.1 233 508 +
ChrX	stalkie_big_nohaplotig	exon	74836863	74837125	100	-	.	ID=FBgn0032135.1.mrna1.exon3;Name=FBgn0032135.1;Parent=FBgn0032135.1.mrna1;Target=FBgn0032135.1 509 771 +
ChrX	stalkie_big_nohaplotig	exon	74836446	74836797	100	-	.	ID=FBgn0032135.1.mrna1.exon4;Name=FBgn0032135.1;Parent=FBgn0032135.1.mrna1;Target=FBgn0032135.1 772 1123 +
ChrX	stalkie_big_nohaplotig	exon	74834025	74834083	100	-	.	ID=FBgn0032135.1.mrna1.exon5;Name=FBgn0032135.1;Parent=FBgn0032135.1.mrna1;Target=FBgn0032135.1 1124 1182 +
ChrX	stalkie_big_nohaplotig	CDS	74849838	74850069	100	-	0	ID=FBgn0032135.1.mrna1.cds1;Name=FBgn0032135.1;Parent=FBgn0032135.1.mrna1;Target=FBgn0032135.1 1 232 +
ChrX	stalkie_big_nohaplotig	CDS	74837203	74837478	100	-	1	ID=FBgn0032135.1.mrna1.cds2;Name=FBgn0032135.1;Parent=FBgn0032135.1.mrna1;Target=FBgn0032135.1 233 508 +
ChrX	stalkie_big_nohaplotig	CDS	74836863	74837125	100	-	1	ID=FBgn0032135.1.mrna1.cds3;Name=FBgn0032135.1;Parent=FBgn0032135.1.mrna1;Target=FBgn0032135.1 509 771 +
ChrX	stalkie_big_nohaplotig	CDS	74836446	74836797	100	-	0	ID=FBgn0032135.1.mrna1.cds4;Name=FBgn0032135.1;Parent=FBgn0032135.1.mrna1;Target=FBgn0032135.1 772 1123 +
ChrX	stalkie_big_nohaplotig	CDS	74834025	74834083	100	-	1	ID=FBgn0032135.1.mrna1.cds5;Name=FBgn0032135.1;Parent=FBgn0032135.1.mrna1;Target=FBgn0032135.1 1124 1182 +
ChrX	stalkie_big_nohaplotig	mRNA	74672260	74673780	.	+	.	ID=FBgn0000273.2.mrna1;Name=FBgn0000273.2;Parent=FBgn0000273.2.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1521;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	74672260	74673780	100	+	.	ID=FBgn0000273.2.mrna1.exon1;Name=FBgn0000273.2;Parent=FBgn0000273.2.mrna1;Target=FBgn0000273.2 1521 1 .
ChrX	stalkie_big_nohaplotig	CDS	74672260	74673780	100	+	0	ID=FBgn0000273.2.mrna1.cds1;Name=FBgn0000273.2;Parent=FBgn0000273.2.mrna1;Target=FBgn0000273.2 1521 1 .
ChrX	stalkie_big_nohaplotig	mRNA	75002485	75007953	.	+	.	ID=FBgn0086443.1.mrna1;Name=FBgn0086443.1;Parent=FBgn0086443.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1698;mismatches=2;indels=0;unknowns=4
ChrX	stalkie_big_nohaplotig	exon	75002485	75002548	100	+	.	ID=FBgn0086443.1.mrna1.exon1;Name=FBgn0086443.1;Parent=FBgn0086443.1.mrna1;Target=FBgn0086443.1 1 64 +
ChrX	stalkie_big_nohaplotig	exon	75002638	75003212	99	+	.	ID=FBgn0086443.1.mrna1.exon2;Name=FBgn0086443.1;Parent=FBgn0086443.1.mrna1;Target=FBgn0086443.1 65 639 +
ChrX	stalkie_big_nohaplotig	exon	75003281	75003573	100	+	.	ID=FBgn0086443.1.mrna1.exon3;Name=FBgn0086443.1;Parent=FBgn0086443.1.mrna1;Target=FBgn0086443.1 640 932 +
ChrX	stalkie_big_nohaplotig	exon	75003630	75004008	100	+	.	ID=FBgn0086443.1.mrna1.exon4;Name=FBgn0086443.1;Parent=FBgn0086443.1.mrna1;Target=FBgn0086443.1 933 1311 +
ChrX	stalkie_big_nohaplotig	exon	75007561	75007953	99	+	.	ID=FBgn0086443.1.mrna1.exon5;Name=FBgn0086443.1;Parent=FBgn0086443.1.mrna1;Target=FBgn0086443.1 1312 1704 +
ChrX	stalkie_big_nohaplotig	CDS	75002485	75002548	100	+	0	ID=FBgn0086443.1.mrna1.cds1;Name=FBgn0086443.1;Parent=FBgn0086443.1.mrna1;Target=FBgn0086443.1 1 64 +
ChrX	stalkie_big_nohaplotig	CDS	75002638	75003212	99	+	1	ID=FBgn0086443.1.mrna1.cds2;Name=FBgn0086443.1;Parent=FBgn0086443.1.mrna1;Target=FBgn0086443.1 65 639 +
ChrX	stalkie_big_nohaplotig	CDS	75003281	75003573	100	+	0	ID=FBgn0086443.1.mrna1.cds3;Name=FBgn0086443.1;Parent=FBgn0086443.1.mrna1;Target=FBgn0086443.1 640 932 +
ChrX	stalkie_big_nohaplotig	CDS	75003630	75004008	100	+	2	ID=FBgn0086443.1.mrna1.cds4;Name=FBgn0086443.1;Parent=FBgn0086443.1.mrna1;Target=FBgn0086443.1 933 1311 +
ChrX	stalkie_big_nohaplotig	CDS	75007561	75007953	99	+	0	ID=FBgn0086443.1.mrna1.cds5;Name=FBgn0086443.1;Parent=FBgn0086443.1.mrna1;Target=FBgn0086443.1 1312 1704 +
Chr2	stalkie_big_nohaplotig	mRNA	35748150	35749012	.	-	.	ID=FBgn0033901.1.mrna1;Name=FBgn0033901.1;Parent=FBgn0033901.1.path1;Dir=sensecoverage=99.9;identity=99.9;matches=805;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	35748862	35749012	100	-	.	ID=FBgn0033901.1.mrna1.exon1;Name=FBgn0033901.1;Parent=FBgn0033901.1.mrna1;Target=FBgn0033901.1 1 151 +
Chr2	stalkie_big_nohaplotig	exon	35748150	35748804	99	-	.	ID=FBgn0033901.1.mrna1.exon2;Name=FBgn0033901.1;Parent=FBgn0033901.1.mrna1;Target=FBgn0033901.1 152 806 +
Chr2	stalkie_big_nohaplotig	CDS	35748862	35749012	100	-	0	ID=FBgn0033901.1.mrna1.cds1;Name=FBgn0033901.1;Parent=FBgn0033901.1.mrna1;Target=FBgn0033901.1 1 151 +
Chr2	stalkie_big_nohaplotig	CDS	35748152	35748804	99	-	1	ID=FBgn0033901.1.mrna1.cds2;Name=FBgn0033901.1;Parent=FBgn0033901.1.mrna1;Target=FBgn0033901.1 152 804 +
ChrX	stalkie_big_nohaplotig	mRNA	27788289	27789878	.	-	.	ID=ORF628.mrna1;Name=ORF628;Parent=ORF628.path1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=1549;mismatches=41;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	27788289	27789878	97	-	.	ID=ORF628.mrna1.exon1;Name=ORF628;Parent=ORF628.mrna1;Target=ORF628 1590 1 .
ChrX	stalkie_big_nohaplotig	CDS	27788289	27789878	97	-	0	ID=ORF628.mrna1.cds1;Name=ORF628;Parent=ORF628.mrna1;Target=ORF628 1590 1 .
ChrX	stalkie_big_nohaplotig	mRNA	27675641	27679729	.	-	.	ID=FBgn0031450.1.mrna1;Name=FBgn0031450.1;Parent=FBgn0031450.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2006;mismatches=4;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	27679696	27679729	100	-	.	ID=FBgn0031450.1.mrna1.exon1;Name=FBgn0031450.1;Parent=FBgn0031450.1.mrna1;Target=FBgn0031450.1 1 34 +
ChrX	stalkie_big_nohaplotig	exon	27679094	27679443	100	-	.	ID=FBgn0031450.1.mrna1.exon2;Name=FBgn0031450.1;Parent=FBgn0031450.1.mrna1;Target=FBgn0031450.1 35 384 +
ChrX	stalkie_big_nohaplotig	exon	27678282	27678518	100	-	.	ID=FBgn0031450.1.mrna1.exon3;Name=FBgn0031450.1;Parent=FBgn0031450.1.mrna1;Target=FBgn0031450.1 385 621 +
ChrX	stalkie_big_nohaplotig	exon	27678098	27678220	100	-	.	ID=FBgn0031450.1.mrna1.exon4;Name=FBgn0031450.1;Parent=FBgn0031450.1.mrna1;Target=FBgn0031450.1 622 744 +
ChrX	stalkie_big_nohaplotig	exon	27677698	27677808	100	-	.	ID=FBgn0031450.1.mrna1.exon5;Name=FBgn0031450.1;Parent=FBgn0031450.1.mrna1;Target=FBgn0031450.1 745 855 +
ChrX	stalkie_big_nohaplotig	exon	27677417	27677629	99	-	.	ID=FBgn0031450.1.mrna1.exon6;Name=FBgn0031450.1;Parent=FBgn0031450.1.mrna1;Target=FBgn0031450.1 856 1068 +
ChrX	stalkie_big_nohaplotig	exon	27675767	27676655	99	-	.	ID=FBgn0031450.1.mrna1.exon7;Name=FBgn0031450.1;Parent=FBgn0031450.1.mrna1;Target=FBgn0031450.1 1069 1957 +
ChrX	stalkie_big_nohaplotig	exon	27675641	27675693	100	-	.	ID=FBgn0031450.1.mrna1.exon8;Name=FBgn0031450.1;Parent=FBgn0031450.1.mrna1;Target=FBgn0031450.1 1958 2010 +
ChrX	stalkie_big_nohaplotig	CDS	27679696	27679729	100	-	0	ID=FBgn0031450.1.mrna1.cds1;Name=FBgn0031450.1;Parent=FBgn0031450.1.mrna1;Target=FBgn0031450.1 1 34 +
ChrX	stalkie_big_nohaplotig	CDS	27679094	27679443	100	-	1	ID=FBgn0031450.1.mrna1.cds2;Name=FBgn0031450.1;Parent=FBgn0031450.1.mrna1;Target=FBgn0031450.1 35 384 +
ChrX	stalkie_big_nohaplotig	CDS	27678282	27678518	100	-	0	ID=FBgn0031450.1.mrna1.cds3;Name=FBgn0031450.1;Parent=FBgn0031450.1.mrna1;Target=FBgn0031450.1 385 621 +
ChrX	stalkie_big_nohaplotig	CDS	27678098	27678220	100	-	0	ID=FBgn0031450.1.mrna1.cds4;Name=FBgn0031450.1;Parent=FBgn0031450.1.mrna1;Target=FBgn0031450.1 622 744 +
ChrX	stalkie_big_nohaplotig	CDS	27677698	27677808	100	-	0	ID=FBgn0031450.1.mrna1.cds5;Name=FBgn0031450.1;Parent=FBgn0031450.1.mrna1;Target=FBgn0031450.1 745 855 +
ChrX	stalkie_big_nohaplotig	CDS	27677417	27677629	99	-	0	ID=FBgn0031450.1.mrna1.cds6;Name=FBgn0031450.1;Parent=FBgn0031450.1.mrna1;Target=FBgn0031450.1 856 1068 +
ChrX	stalkie_big_nohaplotig	CDS	27675767	27676655	99	-	0	ID=FBgn0031450.1.mrna1.cds7;Name=FBgn0031450.1;Parent=FBgn0031450.1.mrna1;Target=FBgn0031450.1 1069 1957 +
ChrX	stalkie_big_nohaplotig	CDS	27675641	27675693	100	-	1	ID=FBgn0031450.1.mrna1.cds8;Name=FBgn0031450.1;Parent=FBgn0031450.1.mrna1;Target=FBgn0031450.1 1958 2010 +
ChrX	stalkie_big_nohaplotig	mRNA	28148969	28150111	.	-	.	ID=FBgn0035823.1.mrna1;Name=FBgn0035823.1;Parent=FBgn0035823.1.path1;Dir=indeterminatecoverage=100.0;identity=97.8;matches=1124;mismatches=13;indels=12;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	28148969	28150111	97	-	.	ID=FBgn0035823.1.mrna1.exon1;Name=FBgn0035823.1;Parent=FBgn0035823.1.mrna1;Target=FBgn0035823.1 1143 1 .
ChrX	stalkie_big_nohaplotig	CDS	28148969	28150111	97	-	0	ID=FBgn0035823.1.mrna1.cds1;Name=FBgn0035823.1;Parent=FBgn0035823.1.mrna1;Target=FBgn0035823.1 1143 1 .
ChrX	stalkie_big_nohaplotig	mRNA	28016286	28063142	.	-	.	ID=FBgn0015772.mrna1;Name=FBgn0015772;Parent=FBgn0015772.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1572;mismatches=3;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	28062950	28063142	100	-	.	ID=FBgn0015772.mrna1.exon1;Name=FBgn0015772;Parent=FBgn0015772.mrna1;Target=FBgn0015772 1 193 +
ChrX	stalkie_big_nohaplotig	exon	28018537	28018658	99	-	.	ID=FBgn0015772.mrna1.exon2;Name=FBgn0015772;Parent=FBgn0015772.mrna1;Target=FBgn0015772 194 315 +
ChrX	stalkie_big_nohaplotig	exon	28018297	28018430	100	-	.	ID=FBgn0015772.mrna1.exon3;Name=FBgn0015772;Parent=FBgn0015772.mrna1;Target=FBgn0015772 316 449 +
ChrX	stalkie_big_nohaplotig	exon	28016917	28017469	99	-	.	ID=FBgn0015772.mrna1.exon4;Name=FBgn0015772;Parent=FBgn0015772.mrna1;Target=FBgn0015772 450 1002 +
ChrX	stalkie_big_nohaplotig	exon	28016286	28016858	100	-	.	ID=FBgn0015772.mrna1.exon5;Name=FBgn0015772;Parent=FBgn0015772.mrna1;Target=FBgn0015772 1003 1575 +
ChrX	stalkie_big_nohaplotig	CDS	28062950	28063142	100	-	0	ID=FBgn0015772.mrna1.cds1;Name=FBgn0015772;Parent=FBgn0015772.mrna1;Target=FBgn0015772 1 193 +
ChrX	stalkie_big_nohaplotig	CDS	28018537	28018658	99	-	1	ID=FBgn0015772.mrna1.cds2;Name=FBgn0015772;Parent=FBgn0015772.mrna1;Target=FBgn0015772 194 315 +
ChrX	stalkie_big_nohaplotig	CDS	28018297	28018430	100	-	0	ID=FBgn0015772.mrna1.cds3;Name=FBgn0015772;Parent=FBgn0015772.mrna1;Target=FBgn0015772 316 449 +
ChrX	stalkie_big_nohaplotig	CDS	28016917	28017469	99	-	2	ID=FBgn0015772.mrna1.cds4;Name=FBgn0015772;Parent=FBgn0015772.mrna1;Target=FBgn0015772 450 1002 +
ChrX	stalkie_big_nohaplotig	CDS	28016286	28016858	100	-	0	ID=FBgn0015772.mrna1.cds5;Name=FBgn0015772;Parent=FBgn0015772.mrna1;Target=FBgn0015772 1003 1575 +
Chr1	stalkie_big_nohaplotig	mRNA	63610734	63615849	.	+	.	ID=FBgn0051025.1.mrna1;Name=FBgn0051025.1;Parent=FBgn0051025.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=3134;mismatches=4;indels=12;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	63610734	63610998	100	+	.	ID=FBgn0051025.1.mrna1.exon1;Name=FBgn0051025.1;Parent=FBgn0051025.1.mrna1;Target=FBgn0051025.1 1 265 +
Chr1	stalkie_big_nohaplotig	exon	63611053	63611215	100	+	.	ID=FBgn0051025.1.mrna1.exon2;Name=FBgn0051025.1;Parent=FBgn0051025.1.mrna1;Target=FBgn0051025.1 266 428 +
Chr1	stalkie_big_nohaplotig	exon	63612036	63612300	100	+	.	ID=FBgn0051025.1.mrna1.exon3;Name=FBgn0051025.1;Parent=FBgn0051025.1.mrna1;Target=FBgn0051025.1 429 693 +
Chr1	stalkie_big_nohaplotig	exon	63612357	63612498	99	+	.	ID=FBgn0051025.1.mrna1.exon4;Name=FBgn0051025.1;Parent=FBgn0051025.1.mrna1;Target=FBgn0051025.1 694 835 +
Chr1	stalkie_big_nohaplotig	exon	63612750	63612894	100	+	.	ID=FBgn0051025.1.mrna1.exon5;Name=FBgn0051025.1;Parent=FBgn0051025.1.mrna1;Target=FBgn0051025.1 836 980 +
Chr1	stalkie_big_nohaplotig	exon	63612959	63613612	99	+	.	ID=FBgn0051025.1.mrna1.exon6;Name=FBgn0051025.1;Parent=FBgn0051025.1.mrna1;Target=FBgn0051025.1 981 1634 +
Chr1	stalkie_big_nohaplotig	exon	63614271	63615677	99	+	.	ID=FBgn0051025.1.mrna1.exon7;Name=FBgn0051025.1;Parent=FBgn0051025.1.mrna1;Target=FBgn0051025.1 1635 3029 +
Chr1	stalkie_big_nohaplotig	exon	63615741	63615849	100	+	.	ID=FBgn0051025.1.mrna1.exon8;Name=FBgn0051025.1;Parent=FBgn0051025.1.mrna1;Target=FBgn0051025.1 3030 3138 +
Chr1	stalkie_big_nohaplotig	CDS	63610734	63610998	100	+	0	ID=FBgn0051025.1.mrna1.cds1;Name=FBgn0051025.1;Parent=FBgn0051025.1.mrna1;Target=FBgn0051025.1 1 265 +
Chr1	stalkie_big_nohaplotig	CDS	63611053	63611215	100	+	1	ID=FBgn0051025.1.mrna1.cds2;Name=FBgn0051025.1;Parent=FBgn0051025.1.mrna1;Target=FBgn0051025.1 266 428 +
Chr1	stalkie_big_nohaplotig	CDS	63612036	63612300	100	+	2	ID=FBgn0051025.1.mrna1.cds3;Name=FBgn0051025.1;Parent=FBgn0051025.1.mrna1;Target=FBgn0051025.1 429 693 +
Chr1	stalkie_big_nohaplotig	CDS	63612357	63612498	99	+	0	ID=FBgn0051025.1.mrna1.cds4;Name=FBgn0051025.1;Parent=FBgn0051025.1.mrna1;Target=FBgn0051025.1 694 835 +
Chr1	stalkie_big_nohaplotig	CDS	63612750	63612894	100	+	1	ID=FBgn0051025.1.mrna1.cds5;Name=FBgn0051025.1;Parent=FBgn0051025.1.mrna1;Target=FBgn0051025.1 836 980 +
Chr1	stalkie_big_nohaplotig	CDS	63612959	63613612	99	+	2	ID=FBgn0051025.1.mrna1.cds6;Name=FBgn0051025.1;Parent=FBgn0051025.1.mrna1;Target=FBgn0051025.1 981 1634 +
Chr1	stalkie_big_nohaplotig	CDS	63614271	63615677	99	+	2	ID=FBgn0051025.1.mrna1.cds7;Name=FBgn0051025.1;Parent=FBgn0051025.1.mrna1;Target=FBgn0051025.1 1635 3029 +
Chr1	stalkie_big_nohaplotig	CDS	63615741	63615849	100	+	2	ID=FBgn0051025.1.mrna1.cds8;Name=FBgn0051025.1;Parent=FBgn0051025.1.mrna1;Target=FBgn0051025.1 3030 3138 +
ChrX	stalkie_big_nohaplotig	mRNA	67320477	67376265	.	-	.	ID=FBgn0028516.1.mrna1;Name=FBgn0028516.1;Parent=FBgn0028516.1.path1;Dir=sensecoverage=74.9;identity=100.0;matches=1173;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	67376155	67376265	100	-	.	ID=FBgn0028516.1.mrna1.exon1;Name=FBgn0028516.1;Parent=FBgn0028516.1.mrna1;Target=FBgn0028516.1 251 361 +
ChrX	stalkie_big_nohaplotig	exon	67370481	67370601	100	-	.	ID=FBgn0028516.1.mrna1.exon2;Name=FBgn0028516.1;Parent=FBgn0028516.1.mrna1;Target=FBgn0028516.1 362 482 +
ChrX	stalkie_big_nohaplotig	exon	67351077	67351256	100	-	.	ID=FBgn0028516.1.mrna1.exon3;Name=FBgn0028516.1;Parent=FBgn0028516.1.mrna1;Target=FBgn0028516.1 483 662 +
ChrX	stalkie_big_nohaplotig	exon	67322810	67323422	100	-	.	ID=FBgn0028516.1.mrna1.exon4;Name=FBgn0028516.1;Parent=FBgn0028516.1.mrna1;Target=FBgn0028516.1 663 1275 +
ChrX	stalkie_big_nohaplotig	exon	67320477	67320624	100	-	.	ID=FBgn0028516.1.mrna1.exon5;Name=FBgn0028516.1;Parent=FBgn0028516.1.mrna1;Target=FBgn0028516.1 1276 1423 +
ChrX	stalkie_big_nohaplotig	CDS	67376155	67376263	100	-	0	ID=FBgn0028516.1.mrna1.cds1;Name=FBgn0028516.1;Parent=FBgn0028516.1.mrna1;Target=FBgn0028516.1 253 361 +
ChrX	stalkie_big_nohaplotig	CDS	67370481	67370601	100	-	1	ID=FBgn0028516.1.mrna1.cds2;Name=FBgn0028516.1;Parent=FBgn0028516.1.mrna1;Target=FBgn0028516.1 362 482 +
ChrX	stalkie_big_nohaplotig	CDS	67351077	67351256	100	-	2	ID=FBgn0028516.1.mrna1.cds3;Name=FBgn0028516.1;Parent=FBgn0028516.1.mrna1;Target=FBgn0028516.1 483 662 +
ChrX	stalkie_big_nohaplotig	CDS	67322810	67323422	100	-	2	ID=FBgn0028516.1.mrna1.cds4;Name=FBgn0028516.1;Parent=FBgn0028516.1.mrna1;Target=FBgn0028516.1 663 1275 +
ChrX	stalkie_big_nohaplotig	CDS	67320478	67320624	100	-	0	ID=FBgn0028516.1.mrna1.cds5;Name=FBgn0028516.1;Parent=FBgn0028516.1.mrna1;Target=FBgn0028516.1 1276 1422 +
ChrX	stalkie_big_nohaplotig	mRNA	67562820	67570118	.	+	.	ID=FBgn0000317.1.mrna1;Name=FBgn0000317.1;Parent=FBgn0000317.1.path1;Dir=sensecoverage=99.6;identity=99.7;matches=6160;mismatches=19;indels=1;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	67562820	67563080	100	+	.	ID=FBgn0000317.1.mrna1.exon1;Name=FBgn0000317.1;Parent=FBgn0000317.1.mrna1;Target=FBgn0000317.1 28 288 +
ChrX	stalkie_big_nohaplotig	exon	67563158	67563507	99	+	.	ID=FBgn0000317.1.mrna1.exon2;Name=FBgn0000317.1;Parent=FBgn0000317.1.mrna1;Target=FBgn0000317.1 289 638 +
ChrX	stalkie_big_nohaplotig	exon	67563567	67563767	99	+	.	ID=FBgn0000317.1.mrna1.exon3;Name=FBgn0000317.1;Parent=FBgn0000317.1.mrna1;Target=FBgn0000317.1 639 839 +
ChrX	stalkie_big_nohaplotig	exon	67564444	67566526	99	+	.	ID=FBgn0000317.1.mrna1.exon4;Name=FBgn0000317.1;Parent=FBgn0000317.1.mrna1;Target=FBgn0000317.1 840 2922 +
ChrX	stalkie_big_nohaplotig	exon	67566585	67566893	99	+	.	ID=FBgn0000317.1.mrna1.exon5;Name=FBgn0000317.1;Parent=FBgn0000317.1.mrna1;Target=FBgn0000317.1 2923 3231 +
ChrX	stalkie_big_nohaplotig	exon	67566960	67568410	99	+	.	ID=FBgn0000317.1.mrna1.exon6;Name=FBgn0000317.1;Parent=FBgn0000317.1.mrna1;Target=FBgn0000317.1 3232 4682 +
ChrX	stalkie_big_nohaplotig	exon	67568470	67569819	99	+	.	ID=FBgn0000317.1.mrna1.exon7;Name=FBgn0000317.1;Parent=FBgn0000317.1.mrna1;Target=FBgn0000317.1 4683 6032 +
ChrX	stalkie_big_nohaplotig	exon	67569885	67570031	99	+	.	ID=FBgn0000317.1.mrna1.exon8;Name=FBgn0000317.1;Parent=FBgn0000317.1.mrna1;Target=FBgn0000317.1 6033 6180 +
ChrX	stalkie_big_nohaplotig	exon	67570092	67570118	100	+	.	ID=FBgn0000317.1.mrna1.exon9;Name=FBgn0000317.1;Parent=FBgn0000317.1.mrna1;Target=FBgn0000317.1 6181 6207 +
ChrX	stalkie_big_nohaplotig	CDS	67562820	67563080	100	+	0	ID=FBgn0000317.1.mrna1.cds1;Name=FBgn0000317.1;Parent=FBgn0000317.1.mrna1;Target=FBgn0000317.1 28 288 +
ChrX	stalkie_big_nohaplotig	CDS	67563158	67563507	99	+	0	ID=FBgn0000317.1.mrna1.cds2;Name=FBgn0000317.1;Parent=FBgn0000317.1.mrna1;Target=FBgn0000317.1 289 638 +
ChrX	stalkie_big_nohaplotig	CDS	67563567	67563767	99	+	2	ID=FBgn0000317.1.mrna1.cds3;Name=FBgn0000317.1;Parent=FBgn0000317.1.mrna1;Target=FBgn0000317.1 639 839 +
ChrX	stalkie_big_nohaplotig	CDS	67564444	67566526	99	+	2	ID=FBgn0000317.1.mrna1.cds4;Name=FBgn0000317.1;Parent=FBgn0000317.1.mrna1;Target=FBgn0000317.1 840 2922 +
ChrX	stalkie_big_nohaplotig	CDS	67566585	67566893	99	+	0	ID=FBgn0000317.1.mrna1.cds5;Name=FBgn0000317.1;Parent=FBgn0000317.1.mrna1;Target=FBgn0000317.1 2923 3231 +
ChrX	stalkie_big_nohaplotig	CDS	67566960	67568410	99	+	0	ID=FBgn0000317.1.mrna1.cds6;Name=FBgn0000317.1;Parent=FBgn0000317.1.mrna1;Target=FBgn0000317.1 3232 4682 +
ChrX	stalkie_big_nohaplotig	CDS	67568470	67569819	99	+	2	ID=FBgn0000317.1.mrna1.cds7;Name=FBgn0000317.1;Parent=FBgn0000317.1.mrna1;Target=FBgn0000317.1 4683 6032 +
ChrX	stalkie_big_nohaplotig	CDS	67569885	67570031	99	+	2	ID=FBgn0000317.1.mrna1.cds8;Name=FBgn0000317.1;Parent=FBgn0000317.1.mrna1;Target=FBgn0000317.1 6033 6180 +
ChrX	stalkie_big_nohaplotig	CDS	67570092	67570118	100	+	0	ID=FBgn0000317.1.mrna1.cds9;Name=FBgn0000317.1;Parent=FBgn0000317.1.mrna1;Target=FBgn0000317.1 6181 6207 +
Chr2	stalkie_big_nohaplotig	mRNA	114584970	114590088	.	-	.	ID=FBgn0039431.1.mrna1;Name=FBgn0039431.1;Parent=FBgn0039431.1.path1;Dir=sensecoverage=96.3;identity=99.8;matches=3725;mismatches=9;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	114589951	114590088	100	-	.	ID=FBgn0039431.1.mrna1.exon1;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 143 280 +
Chr2	stalkie_big_nohaplotig	exon	114589705	114589884	98	-	.	ID=FBgn0039431.1.mrna1.exon2;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 281 460 +
Chr2	stalkie_big_nohaplotig	exon	114589497	114589647	99	-	.	ID=FBgn0039431.1.mrna1.exon3;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 461 611 +
Chr2	stalkie_big_nohaplotig	exon	114589263	114589331	100	-	.	ID=FBgn0039431.1.mrna1.exon4;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 612 680 +
Chr2	stalkie_big_nohaplotig	exon	114588821	114589151	99	-	.	ID=FBgn0039431.1.mrna1.exon5;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 681 1011 +
Chr2	stalkie_big_nohaplotig	exon	114588371	114588760	100	-	.	ID=FBgn0039431.1.mrna1.exon6;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 1012 1401 +
Chr2	stalkie_big_nohaplotig	exon	114588054	114588300	100	-	.	ID=FBgn0039431.1.mrna1.exon7;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 1402 1648 +
Chr2	stalkie_big_nohaplotig	exon	114587542	114587987	100	-	.	ID=FBgn0039431.1.mrna1.exon8;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 1649 2094 +
Chr2	stalkie_big_nohaplotig	exon	114587110	114587407	99	-	.	ID=FBgn0039431.1.mrna1.exon9;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 2095 2392 +
Chr2	stalkie_big_nohaplotig	exon	114586885	114587054	100	-	.	ID=FBgn0039431.1.mrna1.exon10;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 2393 2562 +
Chr2	stalkie_big_nohaplotig	exon	114585856	114586821	99	-	.	ID=FBgn0039431.1.mrna1.exon11;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 2563 3528 +
Chr2	stalkie_big_nohaplotig	exon	114584970	114585317	99	-	.	ID=FBgn0039431.1.mrna1.exon12;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 3529 3876 +
Chr2	stalkie_big_nohaplotig	CDS	114589951	114590086	100	-	0	ID=FBgn0039431.1.mrna1.cds1;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 145 280 +
Chr2	stalkie_big_nohaplotig	CDS	114589705	114589884	98	-	1	ID=FBgn0039431.1.mrna1.cds2;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 281 460 +
Chr2	stalkie_big_nohaplotig	CDS	114589497	114589647	99	-	1	ID=FBgn0039431.1.mrna1.cds3;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 461 611 +
Chr2	stalkie_big_nohaplotig	CDS	114589263	114589331	100	-	2	ID=FBgn0039431.1.mrna1.cds4;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 612 680 +
Chr2	stalkie_big_nohaplotig	CDS	114588821	114589151	99	-	2	ID=FBgn0039431.1.mrna1.cds5;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 681 1011 +
Chr2	stalkie_big_nohaplotig	CDS	114588371	114588760	100	-	0	ID=FBgn0039431.1.mrna1.cds6;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 1012 1401 +
Chr2	stalkie_big_nohaplotig	CDS	114588054	114588300	100	-	0	ID=FBgn0039431.1.mrna1.cds7;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 1402 1648 +
Chr2	stalkie_big_nohaplotig	CDS	114587542	114587987	100	-	1	ID=FBgn0039431.1.mrna1.cds8;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 1649 2094 +
Chr2	stalkie_big_nohaplotig	CDS	114587110	114587407	99	-	0	ID=FBgn0039431.1.mrna1.cds9;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 2095 2392 +
Chr2	stalkie_big_nohaplotig	CDS	114586885	114587054	100	-	1	ID=FBgn0039431.1.mrna1.cds10;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 2393 2562 +
Chr2	stalkie_big_nohaplotig	CDS	114585856	114586821	99	-	0	ID=FBgn0039431.1.mrna1.cds11;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 2563 3528 +
Chr2	stalkie_big_nohaplotig	CDS	114584970	114585317	99	-	0	ID=FBgn0039431.1.mrna1.cds12;Name=FBgn0039431.1;Parent=FBgn0039431.1.mrna1;Target=FBgn0039431.1 3529 3876 +
Chr2	stalkie_big_nohaplotig	mRNA	96653037	96657836	.	+	.	ID=FBgn0039858.1.mrna1;Name=FBgn0039858.1;Parent=FBgn0039858.1.path1;Dir=sensecoverage=94.7;identity=100.0;matches=1688;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	96653037	96653821	100	+	.	ID=FBgn0039858.1.mrna1.exon1;Name=FBgn0039858.1;Parent=FBgn0039858.1.mrna1;Target=FBgn0039858.1 95 879 +
Chr2	stalkie_big_nohaplotig	exon	96653885	96654124	100	+	.	ID=FBgn0039858.1.mrna1.exon2;Name=FBgn0039858.1;Parent=FBgn0039858.1.mrna1;Target=FBgn0039858.1 880 1119 +
Chr2	stalkie_big_nohaplotig	exon	96654908	96655282	100	+	.	ID=FBgn0039858.1.mrna1.exon3;Name=FBgn0039858.1;Parent=FBgn0039858.1.mrna1;Target=FBgn0039858.1 1120 1494 +
Chr2	stalkie_big_nohaplotig	exon	96655479	96655693	100	+	.	ID=FBgn0039858.1.mrna1.exon4;Name=FBgn0039858.1;Parent=FBgn0039858.1.mrna1;Target=FBgn0039858.1 1495 1709 +
Chr2	stalkie_big_nohaplotig	exon	96657764	96657836	100	+	.	ID=FBgn0039858.1.mrna1.exon5;Name=FBgn0039858.1;Parent=FBgn0039858.1.mrna1;Target=FBgn0039858.1 1710 1782 +
Chr2	stalkie_big_nohaplotig	CDS	96653039	96653821	100	+	0	ID=FBgn0039858.1.mrna1.cds1;Name=FBgn0039858.1;Parent=FBgn0039858.1.mrna1;Target=FBgn0039858.1 97 879 +
Chr2	stalkie_big_nohaplotig	CDS	96653885	96654124	100	+	0	ID=FBgn0039858.1.mrna1.cds2;Name=FBgn0039858.1;Parent=FBgn0039858.1.mrna1;Target=FBgn0039858.1 880 1119 +
Chr2	stalkie_big_nohaplotig	CDS	96654908	96655282	100	+	0	ID=FBgn0039858.1.mrna1.cds3;Name=FBgn0039858.1;Parent=FBgn0039858.1.mrna1;Target=FBgn0039858.1 1120 1494 +
Chr2	stalkie_big_nohaplotig	CDS	96655479	96655693	100	+	0	ID=FBgn0039858.1.mrna1.cds4;Name=FBgn0039858.1;Parent=FBgn0039858.1.mrna1;Target=FBgn0039858.1 1495 1709 +
Chr2	stalkie_big_nohaplotig	CDS	96657764	96657836	100	+	2	ID=FBgn0039858.1.mrna1.cds5;Name=FBgn0039858.1;Parent=FBgn0039858.1.mrna1;Target=FBgn0039858.1 1710 1782 +
Chr2	stalkie_big_nohaplotig	mRNA	66436775	66565252	.	+	.	ID=FBgn0005561.1.mrna1;Name=FBgn0005561.1;Parent=FBgn0005561.1.path1;Dir=sensecoverage=99.6;identity=87.6;matches=1924;mismatches=75;indels=198;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	66436775	66437047	100	+	.	ID=FBgn0005561.1.mrna1.exon1;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 11 283 +
Chr2	stalkie_big_nohaplotig	exon	66437727	66437843	100	+	.	ID=FBgn0005561.1.mrna1.exon2;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 284 400 +
Chr2	stalkie_big_nohaplotig	exon	66437963	66438003	100	+	.	ID=FBgn0005561.1.mrna1.exon3;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 401 441 +
Chr2	stalkie_big_nohaplotig	exon	66494646	66494647	100	+	.	ID=FBgn0005561.1.mrna1.exon5;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 599 600 +
Chr2	stalkie_big_nohaplotig	exon	66496544	66496555	100	+	.	ID=FBgn0005561.1.mrna1.exon6;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 601 612 +
Chr2	stalkie_big_nohaplotig	exon	66496579	66496589	100	+	.	ID=FBgn0005561.1.mrna1.exon7;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 718 728 +
Chr2	stalkie_big_nohaplotig	exon	66499317	66499498	37	+	.	ID=FBgn0005561.1.mrna1.exon8;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 753 860 +
Chr2	stalkie_big_nohaplotig	exon	66505094	66505103	100	+	.	ID=FBgn0005561.1.mrna1.exon9;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 1055 1064 +
Chr2	stalkie_big_nohaplotig	exon	66522092	66522132	43	+	.	ID=FBgn0005561.1.mrna1.exon11;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 1069 1112 +
Chr2	stalkie_big_nohaplotig	exon	66523553	66523564	100	+	.	ID=FBgn0005561.1.mrna1.exon12;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 1113 1124 +
Chr2	stalkie_big_nohaplotig	exon	66525440	66525462	65	+	.	ID=FBgn0005561.1.mrna1.exon13;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 1154 1171 +
Chr2	stalkie_big_nohaplotig	exon	66525580	66525642	20	+	.	ID=FBgn0005561.1.mrna1.exon14;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 1172 1187 +
Chr2	stalkie_big_nohaplotig	exon	66525700	66525769	31	+	.	ID=FBgn0005561.1.mrna1.exon15;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 1188 1213 +
Chr2	stalkie_big_nohaplotig	exon	66525836	66525858	39	+	.	ID=FBgn0005561.1.mrna1.exon16;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 1214 1223 +
Chr2	stalkie_big_nohaplotig	exon	66526382	66526393	45	+	.	ID=FBgn0005561.1.mrna1.exon17;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 1224 1247 +
Chr2	stalkie_big_nohaplotig	exon	66557286	66557370	100	+	.	ID=FBgn0005561.1.mrna1.exon18;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 1248 1332 +
Chr2	stalkie_big_nohaplotig	exon	66560833	66561049	100	+	.	ID=FBgn0005561.1.mrna1.exon19;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 1333 1549 +
Chr2	stalkie_big_nohaplotig	exon	66561222	66561317	100	+	.	ID=FBgn0005561.1.mrna1.exon20;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 1550 1645 +
Chr2	stalkie_big_nohaplotig	exon	66562091	66562705	99	+	.	ID=FBgn0005561.1.mrna1.exon21;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 1646 2260 +
Chr2	stalkie_big_nohaplotig	exon	66564915	66565025	100	+	.	ID=FBgn0005561.1.mrna1.exon22;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 2261 2371 +
Chr2	stalkie_big_nohaplotig	exon	66565089	66565252	100	+	.	ID=FBgn0005561.1.mrna1.exon23;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 2372 2535 +
Chr2	stalkie_big_nohaplotig	CDS	66526389	66526393	30	+	0	ID=FBgn0005561.1.mrna1.cds1;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 1235 1247 +
Chr2	stalkie_big_nohaplotig	CDS	66557286	66557370	100	+	1	ID=FBgn0005561.1.mrna1.cds2;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 1248 1332 +
Chr2	stalkie_big_nohaplotig	CDS	66560833	66560887	100	+	2	ID=FBgn0005561.1.mrna1.cds3;Name=FBgn0005561.1;Parent=FBgn0005561.1.mrna1;Target=FBgn0005561.1 1333 1387 +
Chr1	stalkie_big_nohaplotig	mRNA	163648068	163649984	.	+	.	ID=FBgn0030035.1.mrna1;Name=FBgn0030035.1;Parent=FBgn0030035.1.path1;Dir=sensecoverage=100.0;identity=99.2;matches=1846;mismatches=14;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	163648068	163648305	98	+	.	ID=FBgn0030035.1.mrna1.exon1;Name=FBgn0030035.1;Parent=FBgn0030035.1.mrna1;Target=FBgn0030035.1 1 238 +
Chr1	stalkie_big_nohaplotig	exon	163648363	163649984	99	+	.	ID=FBgn0030035.1.mrna1.exon2;Name=FBgn0030035.1;Parent=FBgn0030035.1.mrna1;Target=FBgn0030035.1 239 1860 +
Chr1	stalkie_big_nohaplotig	CDS	163648068	163648305	98	+	0	ID=FBgn0030035.1.mrna1.cds1;Name=FBgn0030035.1;Parent=FBgn0030035.1.mrna1;Target=FBgn0030035.1 1 238 +
Chr1	stalkie_big_nohaplotig	CDS	163648363	163649984	99	+	1	ID=FBgn0030035.1.mrna1.cds2;Name=FBgn0030035.1;Parent=FBgn0030035.1.mrna1;Target=FBgn0030035.1 239 1860 +
Chr1	stalkie_big_nohaplotig	mRNA	155354262	155355663	.	-	.	ID=ORF1207.mrna1;Name=ORF1207;Parent=ORF1207.path1;Dir=sensecoverage=100.0;identity=98.5;matches=1167;mismatches=18;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	155354913	155355663	97	-	.	ID=ORF1207.mrna1.exon1;Name=ORF1207;Parent=ORF1207.mrna1;Target=ORF1207 1 751 +
Chr1	stalkie_big_nohaplotig	exon	155354632	155354842	100	-	.	ID=ORF1207.mrna1.exon2;Name=ORF1207;Parent=ORF1207.mrna1;Target=ORF1207 752 962 +
Chr1	stalkie_big_nohaplotig	exon	155354448	155354541	100	-	.	ID=ORF1207.mrna1.exon3;Name=ORF1207;Parent=ORF1207.mrna1;Target=ORF1207 963 1056 +
Chr1	stalkie_big_nohaplotig	exon	155354262	155354390	100	-	.	ID=ORF1207.mrna1.exon4;Name=ORF1207;Parent=ORF1207.mrna1;Target=ORF1207 1057 1185 +
Chr1	stalkie_big_nohaplotig	CDS	155354913	155355663	97	-	0	ID=ORF1207.mrna1.cds1;Name=ORF1207;Parent=ORF1207.mrna1;Target=ORF1207 1 751 +
Chr1	stalkie_big_nohaplotig	CDS	155354632	155354842	100	-	1	ID=ORF1207.mrna1.cds2;Name=ORF1207;Parent=ORF1207.mrna1;Target=ORF1207 752 962 +
Chr1	stalkie_big_nohaplotig	CDS	155354448	155354541	100	-	2	ID=ORF1207.mrna1.cds3;Name=ORF1207;Parent=ORF1207.mrna1;Target=ORF1207 963 1056 +
Chr1	stalkie_big_nohaplotig	CDS	155354262	155354390	100	-	0	ID=ORF1207.mrna1.cds4;Name=ORF1207;Parent=ORF1207.mrna1;Target=ORF1207 1057 1185 +
Chr1	stalkie_big_nohaplotig	mRNA	164137537	164157282	.	-	.	ID=FBgn0031190.1.mrna1;Name=FBgn0031190.1;Parent=FBgn0031190.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1101;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	164157158	164157282	99	-	.	ID=FBgn0031190.1.mrna1.exon1;Name=FBgn0031190.1;Parent=FBgn0031190.1.mrna1;Target=FBgn0031190.1 1 125 +
Chr1	stalkie_big_nohaplotig	exon	164138260	164138576	100	-	.	ID=FBgn0031190.1.mrna1.exon2;Name=FBgn0031190.1;Parent=FBgn0031190.1.mrna1;Target=FBgn0031190.1 126 442 +
Chr1	stalkie_big_nohaplotig	exon	164137537	164138198	99	-	.	ID=FBgn0031190.1.mrna1.exon3;Name=FBgn0031190.1;Parent=FBgn0031190.1.mrna1;Target=FBgn0031190.1 443 1104 +
Chr1	stalkie_big_nohaplotig	CDS	164157158	164157237	100	-	0	ID=FBgn0031190.1.mrna1.cds1;Name=FBgn0031190.1;Parent=FBgn0031190.1.mrna1;Target=FBgn0031190.1 46 125 +
Chr1	stalkie_big_nohaplotig	CDS	164138260	164138576	100	-	2	ID=FBgn0031190.1.mrna1.cds2;Name=FBgn0031190.1;Parent=FBgn0031190.1.mrna1;Target=FBgn0031190.1 126 442 +
Chr1	stalkie_big_nohaplotig	CDS	164137537	164138198	99	-	1	ID=FBgn0031190.1.mrna1.cds3;Name=FBgn0031190.1;Parent=FBgn0031190.1.mrna1;Target=FBgn0031190.1 443 1104 +
Chr1	stalkie_big_nohaplotig	mRNA	164254873	164255860	.	+	.	ID=FBgn0015774.1.mrna1;Name=FBgn0015774.1;Parent=FBgn0015774.1.path1;Dir=indeterminatecoverage=53.4;identity=100.0;matches=988;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	164254873	164255860	100	+	.	ID=FBgn0015774.1.mrna1.exon1;Name=FBgn0015774.1;Parent=FBgn0015774.1.mrna1;Target=FBgn0015774.1 988 1 .
Chr1	stalkie_big_nohaplotig	CDS	164254873	164255860	100	+	0	ID=FBgn0015774.1.mrna1.cds1;Name=FBgn0015774.1;Parent=FBgn0015774.1.mrna1;Target=FBgn0015774.1 988 1 .
ChrX	stalkie_big_nohaplotig	mRNA	34145839	34151029	.	-	.	ID=FBgn0051869.1.mrna1;Name=FBgn0051869.1;Parent=FBgn0051869.1.path1;Dir=sensecoverage=94.4;identity=99.9;matches=2508;mismatches=2;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	34150877	34151029	100	-	.	ID=FBgn0051869.1.mrna1.exon1;Name=FBgn0051869.1;Parent=FBgn0051869.1.mrna1;Target=FBgn0051869.1 149 301 +
ChrX	stalkie_big_nohaplotig	exon	34150517	34150630	100	-	.	ID=FBgn0051869.1.mrna1.exon2;Name=FBgn0051869.1;Parent=FBgn0051869.1.mrna1;Target=FBgn0051869.1 302 415 +
ChrX	stalkie_big_nohaplotig	exon	34150173	34150256	100	-	.	ID=FBgn0051869.1.mrna1.exon3;Name=FBgn0051869.1;Parent=FBgn0051869.1.mrna1;Target=FBgn0051869.1 416 499 +
ChrX	stalkie_big_nohaplotig	exon	34149861	34149962	100	-	.	ID=FBgn0051869.1.mrna1.exon4;Name=FBgn0051869.1;Parent=FBgn0051869.1.mrna1;Target=FBgn0051869.1 500 601 +
ChrX	stalkie_big_nohaplotig	exon	34147022	34147960	100	-	.	ID=FBgn0051869.1.mrna1.exon5;Name=FBgn0051869.1;Parent=FBgn0051869.1.mrna1;Target=FBgn0051869.1 602 1540 +
ChrX	stalkie_big_nohaplotig	exon	34145839	34146956	99	-	.	ID=FBgn0051869.1.mrna1.exon6;Name=FBgn0051869.1;Parent=FBgn0051869.1.mrna1;Target=FBgn0051869.1 1541 2658 +
ChrX	stalkie_big_nohaplotig	CDS	34150877	34151027	100	-	0	ID=FBgn0051869.1.mrna1.cds1;Name=FBgn0051869.1;Parent=FBgn0051869.1.mrna1;Target=FBgn0051869.1 151 301 +
ChrX	stalkie_big_nohaplotig	CDS	34150517	34150630	100	-	1	ID=FBgn0051869.1.mrna1.cds2;Name=FBgn0051869.1;Parent=FBgn0051869.1.mrna1;Target=FBgn0051869.1 302 415 +
ChrX	stalkie_big_nohaplotig	CDS	34150173	34150256	100	-	1	ID=FBgn0051869.1.mrna1.cds3;Name=FBgn0051869.1;Parent=FBgn0051869.1.mrna1;Target=FBgn0051869.1 416 499 +
ChrX	stalkie_big_nohaplotig	CDS	34149861	34149962	100	-	1	ID=FBgn0051869.1.mrna1.cds4;Name=FBgn0051869.1;Parent=FBgn0051869.1.mrna1;Target=FBgn0051869.1 500 601 +
ChrX	stalkie_big_nohaplotig	CDS	34147022	34147960	100	-	1	ID=FBgn0051869.1.mrna1.cds5;Name=FBgn0051869.1;Parent=FBgn0051869.1.mrna1;Target=FBgn0051869.1 602 1540 +
ChrX	stalkie_big_nohaplotig	CDS	34145839	34146956	99	-	1	ID=FBgn0051869.1.mrna1.cds6;Name=FBgn0051869.1;Parent=FBgn0051869.1.mrna1;Target=FBgn0051869.1 1541 2658 +
ChrX	stalkie_big_nohaplotig	mRNA	34439632	34440579	.	+	.	ID=FBgn0025692.1.mrna1;Name=FBgn0025692.1;Parent=FBgn0025692.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=735;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	34439632	34439659	100	+	.	ID=FBgn0025692.1.mrna1.exon1;Name=FBgn0025692.1;Parent=FBgn0025692.1.mrna1;Target=FBgn0025692.1 1 28 +
ChrX	stalkie_big_nohaplotig	exon	34439721	34439818	100	+	.	ID=FBgn0025692.1.mrna1.exon2;Name=FBgn0025692.1;Parent=FBgn0025692.1.mrna1;Target=FBgn0025692.1 29 126 +
ChrX	stalkie_big_nohaplotig	exon	34439887	34440135	100	+	.	ID=FBgn0025692.1.mrna1.exon3;Name=FBgn0025692.1;Parent=FBgn0025692.1.mrna1;Target=FBgn0025692.1 127 375 +
ChrX	stalkie_big_nohaplotig	exon	34440220	34440579	100	+	.	ID=FBgn0025692.1.mrna1.exon4;Name=FBgn0025692.1;Parent=FBgn0025692.1.mrna1;Target=FBgn0025692.1 376 735 +
ChrX	stalkie_big_nohaplotig	CDS	34439632	34439659	100	+	0	ID=FBgn0025692.1.mrna1.cds1;Name=FBgn0025692.1;Parent=FBgn0025692.1.mrna1;Target=FBgn0025692.1 1 28 +
ChrX	stalkie_big_nohaplotig	CDS	34439721	34439818	100	+	1	ID=FBgn0025692.1.mrna1.cds2;Name=FBgn0025692.1;Parent=FBgn0025692.1.mrna1;Target=FBgn0025692.1 29 126 +
ChrX	stalkie_big_nohaplotig	CDS	34439887	34440135	100	+	0	ID=FBgn0025692.1.mrna1.cds3;Name=FBgn0025692.1;Parent=FBgn0025692.1.mrna1;Target=FBgn0025692.1 127 375 +
ChrX	stalkie_big_nohaplotig	CDS	34440220	34440579	100	+	0	ID=FBgn0025692.1.mrna1.cds4;Name=FBgn0025692.1;Parent=FBgn0025692.1.mrna1;Target=FBgn0025692.1 376 735 +
ChrX	stalkie_big_nohaplotig	mRNA	34461728	34465330	.	-	.	ID=FBgn0032305.1.mrna1;Name=FBgn0032305.1;Parent=FBgn0032305.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2073;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	34464477	34465330	100	-	.	ID=FBgn0032305.1.mrna1.exon1;Name=FBgn0032305.1;Parent=FBgn0032305.1.mrna1;Target=FBgn0032305.1 1 854 +
ChrX	stalkie_big_nohaplotig	exon	34463744	34464398	100	-	.	ID=FBgn0032305.1.mrna1.exon2;Name=FBgn0032305.1;Parent=FBgn0032305.1.mrna1;Target=FBgn0032305.1 855 1509 +
ChrX	stalkie_big_nohaplotig	exon	34463479	34463683	100	-	.	ID=FBgn0032305.1.mrna1.exon3;Name=FBgn0032305.1;Parent=FBgn0032305.1.mrna1;Target=FBgn0032305.1 1510 1714 +
ChrX	stalkie_big_nohaplotig	exon	34463084	34463291	100	-	.	ID=FBgn0032305.1.mrna1.exon4;Name=FBgn0032305.1;Parent=FBgn0032305.1.mrna1;Target=FBgn0032305.1 1715 1922 +
ChrX	stalkie_big_nohaplotig	exon	34461728	34461878	100	-	.	ID=FBgn0032305.1.mrna1.exon5;Name=FBgn0032305.1;Parent=FBgn0032305.1.mrna1;Target=FBgn0032305.1 1923 2073 +
ChrX	stalkie_big_nohaplotig	CDS	34464477	34465330	100	-	0	ID=FBgn0032305.1.mrna1.cds1;Name=FBgn0032305.1;Parent=FBgn0032305.1.mrna1;Target=FBgn0032305.1 1 854 +
ChrX	stalkie_big_nohaplotig	CDS	34463744	34464398	100	-	2	ID=FBgn0032305.1.mrna1.cds2;Name=FBgn0032305.1;Parent=FBgn0032305.1.mrna1;Target=FBgn0032305.1 855 1509 +
ChrX	stalkie_big_nohaplotig	CDS	34463479	34463683	100	-	0	ID=FBgn0032305.1.mrna1.cds3;Name=FBgn0032305.1;Parent=FBgn0032305.1.mrna1;Target=FBgn0032305.1 1510 1714 +
ChrX	stalkie_big_nohaplotig	CDS	34463084	34463291	100	-	1	ID=FBgn0032305.1.mrna1.cds4;Name=FBgn0032305.1;Parent=FBgn0032305.1.mrna1;Target=FBgn0032305.1 1715 1922 +
ChrX	stalkie_big_nohaplotig	CDS	34461728	34461878	100	-	2	ID=FBgn0032305.1.mrna1.cds5;Name=FBgn0032305.1;Parent=FBgn0032305.1.mrna1;Target=FBgn0032305.1 1923 2073 +
ChrX	stalkie_big_nohaplotig	mRNA	34500345	34504079	.	+	.	ID=FBgn0262599.1.mrna1;Name=FBgn0262599.1;Parent=FBgn0262599.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1513;mismatches=2;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	34500345	34500712	99	+	.	ID=FBgn0262599.1.mrna1.exon1;Name=FBgn0262599.1;Parent=FBgn0262599.1.mrna1;Target=FBgn0262599.1 1 368 +
ChrX	stalkie_big_nohaplotig	exon	34502652	34502981	100	+	.	ID=FBgn0262599.1.mrna1.exon2;Name=FBgn0262599.1;Parent=FBgn0262599.1.mrna1;Target=FBgn0262599.1 369 698 +
ChrX	stalkie_big_nohaplotig	exon	34503064	34503290	100	+	.	ID=FBgn0262599.1.mrna1.exon3;Name=FBgn0262599.1;Parent=FBgn0262599.1.mrna1;Target=FBgn0262599.1 699 925 +
ChrX	stalkie_big_nohaplotig	exon	34503490	34504079	99	+	.	ID=FBgn0262599.1.mrna1.exon4;Name=FBgn0262599.1;Parent=FBgn0262599.1.mrna1;Target=FBgn0262599.1 926 1515 +
ChrX	stalkie_big_nohaplotig	CDS	34500345	34500712	99	+	0	ID=FBgn0262599.1.mrna1.cds1;Name=FBgn0262599.1;Parent=FBgn0262599.1.mrna1;Target=FBgn0262599.1 1 368 +
ChrX	stalkie_big_nohaplotig	CDS	34502652	34502981	100	+	2	ID=FBgn0262599.1.mrna1.cds2;Name=FBgn0262599.1;Parent=FBgn0262599.1.mrna1;Target=FBgn0262599.1 369 698 +
ChrX	stalkie_big_nohaplotig	CDS	34503064	34503290	100	+	2	ID=FBgn0262599.1.mrna1.cds3;Name=FBgn0262599.1;Parent=FBgn0262599.1.mrna1;Target=FBgn0262599.1 699 925 +
ChrX	stalkie_big_nohaplotig	CDS	34503490	34504079	99	+	1	ID=FBgn0262599.1.mrna1.cds4;Name=FBgn0262599.1;Parent=FBgn0262599.1.mrna1;Target=FBgn0262599.1 926 1515 +
ChrX	stalkie_big_nohaplotig	mRNA	81261040	81285665	.	+	.	ID=FBgn0043362.1.mrna1;Name=FBgn0043362.1;Parent=FBgn0043362.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=10557;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	81261040	81261351	100	+	.	ID=FBgn0043362.1.mrna1.exon1;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 1 312 +
ChrX	stalkie_big_nohaplotig	exon	81261455	81261700	100	+	.	ID=FBgn0043362.1.mrna1.exon2;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 313 558 +
ChrX	stalkie_big_nohaplotig	exon	81265070	81265424	100	+	.	ID=FBgn0043362.1.mrna1.exon3;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 559 913 +
ChrX	stalkie_big_nohaplotig	exon	81265537	81265723	100	+	.	ID=FBgn0043362.1.mrna1.exon4;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 914 1100 +
ChrX	stalkie_big_nohaplotig	exon	81265809	81267149	100	+	.	ID=FBgn0043362.1.mrna1.exon5;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 1101 2441 +
ChrX	stalkie_big_nohaplotig	exon	81267206	81268212	100	+	.	ID=FBgn0043362.1.mrna1.exon6;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 2442 3448 +
ChrX	stalkie_big_nohaplotig	exon	81268866	81269020	100	+	.	ID=FBgn0043362.1.mrna1.exon7;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 3449 3603 +
ChrX	stalkie_big_nohaplotig	exon	81269147	81269571	100	+	.	ID=FBgn0043362.1.mrna1.exon8;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 3604 4028 +
ChrX	stalkie_big_nohaplotig	exon	81269636	81270840	100	+	.	ID=FBgn0043362.1.mrna1.exon9;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 4029 5233 +
ChrX	stalkie_big_nohaplotig	exon	81270986	81272211	100	+	.	ID=FBgn0043362.1.mrna1.exon10;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 5234 6459 +
ChrX	stalkie_big_nohaplotig	exon	81272274	81272662	100	+	.	ID=FBgn0043362.1.mrna1.exon11;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 6460 6848 +
ChrX	stalkie_big_nohaplotig	exon	81272811	81273069	100	+	.	ID=FBgn0043362.1.mrna1.exon12;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 6849 7107 +
ChrX	stalkie_big_nohaplotig	exon	81274088	81274822	100	+	.	ID=FBgn0043362.1.mrna1.exon13;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 7108 7842 +
ChrX	stalkie_big_nohaplotig	exon	81274899	81275048	100	+	.	ID=FBgn0043362.1.mrna1.exon14;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 7843 7992 +
ChrX	stalkie_big_nohaplotig	exon	81275129	81275347	100	+	.	ID=FBgn0043362.1.mrna1.exon15;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 7993 8211 +
ChrX	stalkie_big_nohaplotig	exon	81275415	81275694	100	+	.	ID=FBgn0043362.1.mrna1.exon16;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 8212 8491 +
ChrX	stalkie_big_nohaplotig	exon	81276055	81276185	100	+	.	ID=FBgn0043362.1.mrna1.exon17;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 8492 8622 +
ChrX	stalkie_big_nohaplotig	exon	81276252	81276355	100	+	.	ID=FBgn0043362.1.mrna1.exon18;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 8623 8726 +
ChrX	stalkie_big_nohaplotig	exon	81276727	81277027	100	+	.	ID=FBgn0043362.1.mrna1.exon19;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 8727 9027 +
ChrX	stalkie_big_nohaplotig	exon	81279400	81280011	100	+	.	ID=FBgn0043362.1.mrna1.exon20;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 9028 9639 +
ChrX	stalkie_big_nohaplotig	exon	81281107	81281305	100	+	.	ID=FBgn0043362.1.mrna1.exon21;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 9640 9838 +
ChrX	stalkie_big_nohaplotig	exon	81281359	81281559	100	+	.	ID=FBgn0043362.1.mrna1.exon22;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 9839 10039 +
ChrX	stalkie_big_nohaplotig	exon	81281763	81281867	100	+	.	ID=FBgn0043362.1.mrna1.exon23;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 10040 10144 +
ChrX	stalkie_big_nohaplotig	exon	81281930	81282064	100	+	.	ID=FBgn0043362.1.mrna1.exon24;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 10145 10279 +
ChrX	stalkie_big_nohaplotig	exon	81285320	81285434	100	+	.	ID=FBgn0043362.1.mrna1.exon25;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 10280 10394 +
ChrX	stalkie_big_nohaplotig	exon	81285503	81285665	100	+	.	ID=FBgn0043362.1.mrna1.exon26;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 10395 10557 +
ChrX	stalkie_big_nohaplotig	CDS	81261040	81261351	100	+	0	ID=FBgn0043362.1.mrna1.cds1;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 1 312 +
ChrX	stalkie_big_nohaplotig	CDS	81261455	81261700	100	+	0	ID=FBgn0043362.1.mrna1.cds2;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 313 558 +
ChrX	stalkie_big_nohaplotig	CDS	81265070	81265424	100	+	0	ID=FBgn0043362.1.mrna1.cds3;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 559 913 +
ChrX	stalkie_big_nohaplotig	CDS	81265537	81265723	100	+	1	ID=FBgn0043362.1.mrna1.cds4;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 914 1100 +
ChrX	stalkie_big_nohaplotig	CDS	81265809	81267149	100	+	2	ID=FBgn0043362.1.mrna1.cds5;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 1101 2441 +
ChrX	stalkie_big_nohaplotig	CDS	81267206	81268212	100	+	2	ID=FBgn0043362.1.mrna1.cds6;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 2442 3448 +
ChrX	stalkie_big_nohaplotig	CDS	81268866	81269020	100	+	1	ID=FBgn0043362.1.mrna1.cds7;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 3449 3603 +
ChrX	stalkie_big_nohaplotig	CDS	81269147	81269571	100	+	0	ID=FBgn0043362.1.mrna1.cds8;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 3604 4028 +
ChrX	stalkie_big_nohaplotig	CDS	81269636	81270840	100	+	2	ID=FBgn0043362.1.mrna1.cds9;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 4029 5233 +
ChrX	stalkie_big_nohaplotig	CDS	81270986	81272211	100	+	1	ID=FBgn0043362.1.mrna1.cds10;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 5234 6459 +
ChrX	stalkie_big_nohaplotig	CDS	81272274	81272662	100	+	0	ID=FBgn0043362.1.mrna1.cds11;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 6460 6848 +
ChrX	stalkie_big_nohaplotig	CDS	81272811	81273069	100	+	2	ID=FBgn0043362.1.mrna1.cds12;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 6849 7107 +
ChrX	stalkie_big_nohaplotig	CDS	81274088	81274822	100	+	0	ID=FBgn0043362.1.mrna1.cds13;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 7108 7842 +
ChrX	stalkie_big_nohaplotig	CDS	81274899	81275048	100	+	0	ID=FBgn0043362.1.mrna1.cds14;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 7843 7992 +
ChrX	stalkie_big_nohaplotig	CDS	81275129	81275347	100	+	0	ID=FBgn0043362.1.mrna1.cds15;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 7993 8211 +
ChrX	stalkie_big_nohaplotig	CDS	81275415	81275694	100	+	0	ID=FBgn0043362.1.mrna1.cds16;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 8212 8491 +
ChrX	stalkie_big_nohaplotig	CDS	81276055	81276185	100	+	1	ID=FBgn0043362.1.mrna1.cds17;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 8492 8622 +
ChrX	stalkie_big_nohaplotig	CDS	81276252	81276355	100	+	0	ID=FBgn0043362.1.mrna1.cds18;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 8623 8726 +
ChrX	stalkie_big_nohaplotig	CDS	81276727	81277027	100	+	2	ID=FBgn0043362.1.mrna1.cds19;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 8727 9027 +
ChrX	stalkie_big_nohaplotig	CDS	81279400	81280011	100	+	0	ID=FBgn0043362.1.mrna1.cds20;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 9028 9639 +
ChrX	stalkie_big_nohaplotig	CDS	81281107	81281305	100	+	0	ID=FBgn0043362.1.mrna1.cds21;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 9640 9838 +
ChrX	stalkie_big_nohaplotig	CDS	81281359	81281559	100	+	1	ID=FBgn0043362.1.mrna1.cds22;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 9839 10039 +
ChrX	stalkie_big_nohaplotig	CDS	81281763	81281867	100	+	1	ID=FBgn0043362.1.mrna1.cds23;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 10040 10144 +
ChrX	stalkie_big_nohaplotig	CDS	81281930	81282064	100	+	1	ID=FBgn0043362.1.mrna1.cds24;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 10145 10279 +
ChrX	stalkie_big_nohaplotig	CDS	81285320	81285434	100	+	1	ID=FBgn0043362.1.mrna1.cds25;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 10280 10394 +
ChrX	stalkie_big_nohaplotig	CDS	81285503	81285665	100	+	2	ID=FBgn0043362.1.mrna1.cds26;Name=FBgn0043362.1;Parent=FBgn0043362.1.mrna1;Target=FBgn0043362.1 10395 10557 +
ChrX	stalkie_big_nohaplotig	mRNA	1743552	1744549	.	+	.	ID=FBgn0028694.1.mrna1;Name=FBgn0028694.1;Parent=FBgn0028694.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=930;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	1743552	1744322	100	+	.	ID=FBgn0028694.1.mrna1.exon1;Name=FBgn0028694.1;Parent=FBgn0028694.1.mrna1;Target=FBgn0028694.1 1 771 +
ChrX	stalkie_big_nohaplotig	exon	1744391	1744549	100	+	.	ID=FBgn0028694.1.mrna1.exon2;Name=FBgn0028694.1;Parent=FBgn0028694.1.mrna1;Target=FBgn0028694.1 772 930 +
ChrX	stalkie_big_nohaplotig	CDS	1743552	1744322	100	+	0	ID=FBgn0028694.1.mrna1.cds1;Name=FBgn0028694.1;Parent=FBgn0028694.1.mrna1;Target=FBgn0028694.1 1 771 +
ChrX	stalkie_big_nohaplotig	CDS	1744391	1744549	100	+	0	ID=FBgn0028694.1.mrna1.cds2;Name=FBgn0028694.1;Parent=FBgn0028694.1.mrna1;Target=FBgn0028694.1 772 930 +
Chr1	stalkie_big_nohaplotig	mRNA	163590936	163592634	.	+	.	ID=FBgn0038414.1.mrna1;Name=FBgn0038414.1;Parent=FBgn0038414.1.path1;Dir=sensecoverage=100.0;identity=98.9;matches=979;mismatches=11;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	163590936	163590996	100	+	.	ID=FBgn0038414.1.mrna1.exon1;Name=FBgn0038414.1;Parent=FBgn0038414.1.mrna1;Target=FBgn0038414.1 1 61 +
Chr1	stalkie_big_nohaplotig	exon	163591652	163591824	100	+	.	ID=FBgn0038414.1.mrna1.exon2;Name=FBgn0038414.1;Parent=FBgn0038414.1.mrna1;Target=FBgn0038414.1 62 234 +
Chr1	stalkie_big_nohaplotig	exon	163591879	163592634	98	+	.	ID=FBgn0038414.1.mrna1.exon3;Name=FBgn0038414.1;Parent=FBgn0038414.1.mrna1;Target=FBgn0038414.1 235 990 +
Chr1	stalkie_big_nohaplotig	CDS	163590936	163590996	100	+	0	ID=FBgn0038414.1.mrna1.cds1;Name=FBgn0038414.1;Parent=FBgn0038414.1.mrna1;Target=FBgn0038414.1 1 61 +
Chr1	stalkie_big_nohaplotig	CDS	163591652	163591824	100	+	1	ID=FBgn0038414.1.mrna1.cds2;Name=FBgn0038414.1;Parent=FBgn0038414.1.mrna1;Target=FBgn0038414.1 62 234 +
Chr1	stalkie_big_nohaplotig	CDS	163591879	163592634	98	+	0	ID=FBgn0038414.1.mrna1.cds3;Name=FBgn0038414.1;Parent=FBgn0038414.1.mrna1;Target=FBgn0038414.1 235 990 +
ChrX	stalkie_big_nohaplotig	mRNA	8304498	8305776	.	-	.	ID=ORF2361.mrna1;Name=ORF2361;Parent=ORF2361.path1;Dir=indeterminatecoverage=98.3;identity=99.2;matches=848;mismatches=7;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	8305650	8305776	98	-	.	ID=ORF2361.mrna1.exon1;Name=ORF2361;Parent=ORF2361.mrna1;Target=ORF2361 142 16 .
ChrX	stalkie_big_nohaplotig	exon	8305384	8305527	99	-	.	ID=ORF2361.mrna1.exon2;Name=ORF2361;Parent=ORF2361.mrna1;Target=ORF2361 286 143 .
ChrX	stalkie_big_nohaplotig	exon	8304956	8305300	99	-	.	ID=ORF2361.mrna1.exon3;Name=ORF2361;Parent=ORF2361.mrna1;Target=ORF2361 631 287 .
ChrX	stalkie_big_nohaplotig	exon	8304498	8304736	98	-	.	ID=ORF2361.mrna1.exon4;Name=ORF2361;Parent=ORF2361.mrna1;Target=ORF2361 870 632 .
ChrX	stalkie_big_nohaplotig	CDS	8305650	8305776	98	-	0	ID=ORF2361.mrna1.cds1;Name=ORF2361;Parent=ORF2361.mrna1;Target=ORF2361 142 16 .
ChrX	stalkie_big_nohaplotig	CDS	8305384	8305527	99	-	1	ID=ORF2361.mrna1.cds2;Name=ORF2361;Parent=ORF2361.mrna1;Target=ORF2361 286 143 .
ChrX	stalkie_big_nohaplotig	CDS	8304956	8305300	99	-	1	ID=ORF2361.mrna1.cds3;Name=ORF2361;Parent=ORF2361.mrna1;Target=ORF2361 631 287 .
ChrX	stalkie_big_nohaplotig	CDS	8304498	8304736	98	-	1	ID=ORF2361.mrna1.cds4;Name=ORF2361;Parent=ORF2361.mrna1;Target=ORF2361 870 632 .
Chr1	stalkie_big_nohaplotig	mRNA	160788152	160790101	.	+	.	ID=FBgn0030300.1.mrna1;Name=FBgn0030300.1;Parent=FBgn0030300.1.path1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1934;mismatches=16;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	160788152	160790101	99	+	.	ID=FBgn0030300.1.mrna1.exon1;Name=FBgn0030300.1;Parent=FBgn0030300.1.mrna1;Target=FBgn0030300.1 1950 1 .
Chr1	stalkie_big_nohaplotig	CDS	160788152	160790101	99	+	0	ID=FBgn0030300.1.mrna1.cds1;Name=FBgn0030300.1;Parent=FBgn0030300.1.mrna1;Target=FBgn0030300.1 1950 1 .
Chr1	stalkie_big_nohaplotig	mRNA	160744420	160745340	.	-	.	ID=AAEL007663.1.mrna1;Name=AAEL007663.1;Parent=AAEL007663.1.path1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=903;mismatches=18;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	160744420	160745340	98	-	.	ID=AAEL007663.1.mrna1.exon1;Name=AAEL007663.1;Parent=AAEL007663.1.mrna1;Target=AAEL007663.1 921 1 .
Chr1	stalkie_big_nohaplotig	CDS	160744420	160745340	98	-	0	ID=AAEL007663.1.mrna1.cds1;Name=AAEL007663.1;Parent=AAEL007663.1.mrna1;Target=AAEL007663.1 921 1 .
Chr1	stalkie_big_nohaplotig	mRNA	160574363	160579207	.	-	.	ID=FBgn0030077.1.mrna1;Name=FBgn0030077.1;Parent=FBgn0030077.1.path1;Dir=sensecoverage=100.0;identity=98.9;matches=1971;mismatches=6;indels=15;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	160579067	160579207	89	-	.	ID=FBgn0030077.1.mrna1.exon1;Name=FBgn0030077.1;Parent=FBgn0030077.1.mrna1;Target=FBgn0030077.1 1 126 +
Chr1	stalkie_big_nohaplotig	exon	160578534	160578684	100	-	.	ID=FBgn0030077.1.mrna1.exon2;Name=FBgn0030077.1;Parent=FBgn0030077.1.mrna1;Target=FBgn0030077.1 127 277 +
Chr1	stalkie_big_nohaplotig	exon	160577015	160577252	100	-	.	ID=FBgn0030077.1.mrna1.exon3;Name=FBgn0030077.1;Parent=FBgn0030077.1.mrna1;Target=FBgn0030077.1 278 515 +
Chr1	stalkie_big_nohaplotig	exon	160576706	160576928	100	-	.	ID=FBgn0030077.1.mrna1.exon4;Name=FBgn0030077.1;Parent=FBgn0030077.1.mrna1;Target=FBgn0030077.1 516 738 +
Chr1	stalkie_big_nohaplotig	exon	160576429	160576640	99	-	.	ID=FBgn0030077.1.mrna1.exon5;Name=FBgn0030077.1;Parent=FBgn0030077.1.mrna1;Target=FBgn0030077.1 739 950 +
Chr1	stalkie_big_nohaplotig	exon	160576184	160576373	98	-	.	ID=FBgn0030077.1.mrna1.exon6;Name=FBgn0030077.1;Parent=FBgn0030077.1.mrna1;Target=FBgn0030077.1 951 1140 +
Chr1	stalkie_big_nohaplotig	exon	160574363	160575199	99	-	.	ID=FBgn0030077.1.mrna1.exon7;Name=FBgn0030077.1;Parent=FBgn0030077.1.mrna1;Target=FBgn0030077.1 1141 1977 +
Chr1	stalkie_big_nohaplotig	CDS	160579067	160579207	89	-	0	ID=FBgn0030077.1.mrna1.cds1;Name=FBgn0030077.1;Parent=FBgn0030077.1.mrna1;Target=FBgn0030077.1 1 126 +
Chr1	stalkie_big_nohaplotig	CDS	160578534	160578684	100	-	0	ID=FBgn0030077.1.mrna1.cds2;Name=FBgn0030077.1;Parent=FBgn0030077.1.mrna1;Target=FBgn0030077.1 127 277 +
Chr1	stalkie_big_nohaplotig	CDS	160577015	160577252	100	-	1	ID=FBgn0030077.1.mrna1.cds3;Name=FBgn0030077.1;Parent=FBgn0030077.1.mrna1;Target=FBgn0030077.1 278 515 +
Chr1	stalkie_big_nohaplotig	CDS	160576706	160576928	100	-	2	ID=FBgn0030077.1.mrna1.cds4;Name=FBgn0030077.1;Parent=FBgn0030077.1.mrna1;Target=FBgn0030077.1 516 738 +
Chr1	stalkie_big_nohaplotig	CDS	160576429	160576640	99	-	0	ID=FBgn0030077.1.mrna1.cds5;Name=FBgn0030077.1;Parent=FBgn0030077.1.mrna1;Target=FBgn0030077.1 739 950 +
Chr1	stalkie_big_nohaplotig	CDS	160576184	160576373	98	-	2	ID=FBgn0030077.1.mrna1.cds6;Name=FBgn0030077.1;Parent=FBgn0030077.1.mrna1;Target=FBgn0030077.1 951 1140 +
Chr1	stalkie_big_nohaplotig	CDS	160574363	160575199	99	-	0	ID=FBgn0030077.1.mrna1.cds7;Name=FBgn0030077.1;Parent=FBgn0030077.1.mrna1;Target=FBgn0030077.1 1141 1977 +
Chr1	stalkie_big_nohaplotig	mRNA	160434553	160471783	.	+	.	ID=FBgn0040068.1.mrna1;Name=FBgn0040068.1;Parent=FBgn0040068.1.path1;Dir=sensecoverage=100.0;identity=99.2;matches=2444;mismatches=19;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	160434553	160434900	99	+	.	ID=FBgn0040068.1.mrna1.exon1;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 1 348 +
Chr1	stalkie_big_nohaplotig	exon	160462389	160462570	100	+	.	ID=FBgn0040068.1.mrna1.exon2;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 349 530 +
Chr1	stalkie_big_nohaplotig	exon	160462631	160462705	100	+	.	ID=FBgn0040068.1.mrna1.exon3;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 531 605 +
Chr1	stalkie_big_nohaplotig	exon	160467785	160467893	100	+	.	ID=FBgn0040068.1.mrna1.exon4;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 606 714 +
Chr1	stalkie_big_nohaplotig	exon	160468055	160468222	98	+	.	ID=FBgn0040068.1.mrna1.exon5;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 715 882 +
Chr1	stalkie_big_nohaplotig	exon	160468287	160468490	97	+	.	ID=FBgn0040068.1.mrna1.exon6;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 883 1086 +
Chr1	stalkie_big_nohaplotig	exon	160469610	160469729	99	+	.	ID=FBgn0040068.1.mrna1.exon7;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 1087 1206 +
Chr1	stalkie_big_nohaplotig	exon	160469796	160469912	98	+	.	ID=FBgn0040068.1.mrna1.exon8;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 1207 1323 +
Chr1	stalkie_big_nohaplotig	exon	160469986	160470368	100	+	.	ID=FBgn0040068.1.mrna1.exon9;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 1324 1706 +
Chr1	stalkie_big_nohaplotig	exon	160470425	160470542	98	+	.	ID=FBgn0040068.1.mrna1.exon10;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 1707 1824 +
Chr1	stalkie_big_nohaplotig	exon	160470617	160470744	99	+	.	ID=FBgn0040068.1.mrna1.exon11;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 1825 1952 +
Chr1	stalkie_big_nohaplotig	exon	160470856	160470987	99	+	.	ID=FBgn0040068.1.mrna1.exon12;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 1953 2084 +
Chr1	stalkie_big_nohaplotig	exon	160471256	160471408	100	+	.	ID=FBgn0040068.1.mrna1.exon13;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 2085 2237 +
Chr1	stalkie_big_nohaplotig	exon	160471504	160471672	98	+	.	ID=FBgn0040068.1.mrna1.exon14;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 2238 2406 +
Chr1	stalkie_big_nohaplotig	exon	160471727	160471783	100	+	.	ID=FBgn0040068.1.mrna1.exon15;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 2407 2463 +
Chr1	stalkie_big_nohaplotig	CDS	160434553	160434900	99	+	0	ID=FBgn0040068.1.mrna1.cds1;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 1 348 +
Chr1	stalkie_big_nohaplotig	CDS	160462389	160462570	100	+	0	ID=FBgn0040068.1.mrna1.cds2;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 349 530 +
Chr1	stalkie_big_nohaplotig	CDS	160462631	160462705	100	+	2	ID=FBgn0040068.1.mrna1.cds3;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 531 605 +
Chr1	stalkie_big_nohaplotig	CDS	160467785	160467893	100	+	2	ID=FBgn0040068.1.mrna1.cds4;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 606 714 +
Chr1	stalkie_big_nohaplotig	CDS	160468055	160468222	98	+	0	ID=FBgn0040068.1.mrna1.cds5;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 715 882 +
Chr1	stalkie_big_nohaplotig	CDS	160468287	160468490	97	+	0	ID=FBgn0040068.1.mrna1.cds6;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 883 1086 +
Chr1	stalkie_big_nohaplotig	CDS	160469610	160469729	99	+	0	ID=FBgn0040068.1.mrna1.cds7;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 1087 1206 +
Chr1	stalkie_big_nohaplotig	CDS	160469796	160469912	98	+	0	ID=FBgn0040068.1.mrna1.cds8;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 1207 1323 +
Chr1	stalkie_big_nohaplotig	CDS	160469986	160470368	100	+	0	ID=FBgn0040068.1.mrna1.cds9;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 1324 1706 +
Chr1	stalkie_big_nohaplotig	CDS	160470425	160470542	98	+	2	ID=FBgn0040068.1.mrna1.cds10;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 1707 1824 +
Chr1	stalkie_big_nohaplotig	CDS	160470617	160470744	99	+	0	ID=FBgn0040068.1.mrna1.cds11;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 1825 1952 +
Chr1	stalkie_big_nohaplotig	CDS	160470856	160470987	99	+	2	ID=FBgn0040068.1.mrna1.cds12;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 1953 2084 +
Chr1	stalkie_big_nohaplotig	CDS	160471256	160471408	100	+	2	ID=FBgn0040068.1.mrna1.cds13;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 2085 2237 +
Chr1	stalkie_big_nohaplotig	CDS	160471504	160471672	98	+	2	ID=FBgn0040068.1.mrna1.cds14;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 2238 2406 +
Chr1	stalkie_big_nohaplotig	CDS	160471727	160471783	100	+	0	ID=FBgn0040068.1.mrna1.cds15;Name=FBgn0040068.1;Parent=FBgn0040068.1.mrna1;Target=FBgn0040068.1 2407 2463 +
Chr2	stalkie_big_nohaplotig	mRNA	159410558	159428150	.	-	.	ID=FBgn0010113.mrna1;Name=FBgn0010113;Parent=FBgn0010113.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1909;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	159426886	159428150	100	-	.	ID=FBgn0010113.mrna1.exon1;Name=FBgn0010113;Parent=FBgn0010113.mrna1;Target=FBgn0010113 1 1265 +
Chr2	stalkie_big_nohaplotig	exon	159423299	159423395	100	-	.	ID=FBgn0010113.mrna1.exon2;Name=FBgn0010113;Parent=FBgn0010113.mrna1;Target=FBgn0010113 1266 1362 +
Chr2	stalkie_big_nohaplotig	exon	159411902	159412090	98	-	.	ID=FBgn0010113.mrna1.exon3;Name=FBgn0010113;Parent=FBgn0010113.mrna1;Target=FBgn0010113 1363 1551 +
Chr2	stalkie_big_nohaplotig	exon	159411158	159411246	100	-	.	ID=FBgn0010113.mrna1.exon4;Name=FBgn0010113;Parent=FBgn0010113.mrna1;Target=FBgn0010113 1552 1640 +
Chr2	stalkie_big_nohaplotig	exon	159410985	159411084	100	-	.	ID=FBgn0010113.mrna1.exon5;Name=FBgn0010113;Parent=FBgn0010113.mrna1;Target=FBgn0010113 1641 1740 +
Chr2	stalkie_big_nohaplotig	exon	159410558	159410728	100	-	.	ID=FBgn0010113.mrna1.exon6;Name=FBgn0010113;Parent=FBgn0010113.mrna1;Target=FBgn0010113 1741 1911 +
Chr2	stalkie_big_nohaplotig	CDS	159426886	159428150	100	-	0	ID=FBgn0010113.mrna1.cds1;Name=FBgn0010113;Parent=FBgn0010113.mrna1;Target=FBgn0010113 1 1265 +
Chr2	stalkie_big_nohaplotig	CDS	159423299	159423395	100	-	2	ID=FBgn0010113.mrna1.cds2;Name=FBgn0010113;Parent=FBgn0010113.mrna1;Target=FBgn0010113 1266 1362 +
Chr2	stalkie_big_nohaplotig	CDS	159411902	159412090	98	-	0	ID=FBgn0010113.mrna1.cds3;Name=FBgn0010113;Parent=FBgn0010113.mrna1;Target=FBgn0010113 1363 1551 +
Chr2	stalkie_big_nohaplotig	CDS	159411158	159411246	100	-	0	ID=FBgn0010113.mrna1.cds4;Name=FBgn0010113;Parent=FBgn0010113.mrna1;Target=FBgn0010113 1552 1640 +
Chr2	stalkie_big_nohaplotig	CDS	159410985	159411084	100	-	2	ID=FBgn0010113.mrna1.cds5;Name=FBgn0010113;Parent=FBgn0010113.mrna1;Target=FBgn0010113 1641 1740 +
Chr2	stalkie_big_nohaplotig	CDS	159410558	159410728	100	-	0	ID=FBgn0010113.mrna1.cds6;Name=FBgn0010113;Parent=FBgn0010113.mrna1;Target=FBgn0010113 1741 1911 +
Chr2	stalkie_big_nohaplotig	mRNA	15073445	15075800	.	-	.	ID=FBgn0034367.1.mrna1;Name=FBgn0034367.1;Parent=FBgn0034367.1.path1;Dir=sensecoverage=100.0;identity=99.2;matches=2219;mismatches=19;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	15074805	15075800	99	-	.	ID=FBgn0034367.1.mrna1.exon1;Name=FBgn0034367.1;Parent=FBgn0034367.1.mrna1;Target=FBgn0034367.1 1 996 +
Chr2	stalkie_big_nohaplotig	exon	15073980	15074747	98	-	.	ID=FBgn0034367.1.mrna1.exon2;Name=FBgn0034367.1;Parent=FBgn0034367.1.mrna1;Target=FBgn0034367.1 997 1764 +
Chr2	stalkie_big_nohaplotig	exon	15073445	15073918	99	-	.	ID=FBgn0034367.1.mrna1.exon3;Name=FBgn0034367.1;Parent=FBgn0034367.1.mrna1;Target=FBgn0034367.1 1765 2238 +
Chr2	stalkie_big_nohaplotig	CDS	15074805	15075800	99	-	0	ID=FBgn0034367.1.mrna1.cds1;Name=FBgn0034367.1;Parent=FBgn0034367.1.mrna1;Target=FBgn0034367.1 1 996 +
Chr2	stalkie_big_nohaplotig	CDS	15073980	15074747	98	-	0	ID=FBgn0034367.1.mrna1.cds2;Name=FBgn0034367.1;Parent=FBgn0034367.1.mrna1;Target=FBgn0034367.1 997 1764 +
Chr2	stalkie_big_nohaplotig	CDS	15073445	15073918	99	-	0	ID=FBgn0034367.1.mrna1.cds3;Name=FBgn0034367.1;Parent=FBgn0034367.1.mrna1;Target=FBgn0034367.1 1765 2238 +
Chr1	stalkie_big_nohaplotig	mRNA	160634673	160646943	.	-	.	ID=FBgn0030079.1.mrna1;Name=FBgn0030079.1;Parent=FBgn0030079.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=394;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	160646890	160646943	100	-	.	ID=FBgn0030079.1.mrna1.exon1;Name=FBgn0030079.1;Parent=FBgn0030079.1.mrna1;Target=FBgn0030079.1 1 54 +
Chr1	stalkie_big_nohaplotig	exon	160634995	160635112	100	-	.	ID=FBgn0030079.1.mrna1.exon2;Name=FBgn0030079.1;Parent=FBgn0030079.1.mrna1;Target=FBgn0030079.1 55 172 +
Chr1	stalkie_big_nohaplotig	exon	160634673	160634896	99	-	.	ID=FBgn0030079.1.mrna1.exon3;Name=FBgn0030079.1;Parent=FBgn0030079.1.mrna1;Target=FBgn0030079.1 173 396 +
Chr1	stalkie_big_nohaplotig	CDS	160646890	160646943	100	-	0	ID=FBgn0030079.1.mrna1.cds1;Name=FBgn0030079.1;Parent=FBgn0030079.1.mrna1;Target=FBgn0030079.1 1 54 +
Chr1	stalkie_big_nohaplotig	CDS	160634995	160635112	100	-	0	ID=FBgn0030079.1.mrna1.cds2;Name=FBgn0030079.1;Parent=FBgn0030079.1.mrna1;Target=FBgn0030079.1 55 172 +
Chr1	stalkie_big_nohaplotig	CDS	160634673	160634896	99	-	1	ID=FBgn0030079.1.mrna1.cds3;Name=FBgn0030079.1;Parent=FBgn0030079.1.mrna1;Target=FBgn0030079.1 173 396 +
Chr2	stalkie_big_nohaplotig	mRNA	50036952	50037627	.	-	.	ID=FBgn0016970.1.mrna1;Name=FBgn0016970.1;Parent=FBgn0016970.1.path1;Dir=indeterminatecoverage=100.0;identity=97.9;matches=662;mismatches=13;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	50036952	50037627	97	-	.	ID=FBgn0016970.1.mrna1.exon1;Name=FBgn0016970.1;Parent=FBgn0016970.1.mrna1;Target=FBgn0016970.1 675 1 .
Chr2	stalkie_big_nohaplotig	CDS	50036952	50037581	97	-	0	ID=FBgn0016970.1.mrna1.cds1;Name=FBgn0016970.1;Parent=FBgn0016970.1.mrna1;Target=FBgn0016970.1 675 46 .
Chr1	stalkie_big_nohaplotig	mRNA	164175463	164176416	.	-	.	ID=FBgn0026738.1.mrna1;Name=FBgn0026738.1;Parent=FBgn0026738.1.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=953;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	164175463	164176416	99	-	.	ID=FBgn0026738.1.mrna1.exon1;Name=FBgn0026738.1;Parent=FBgn0026738.1.mrna1;Target=FBgn0026738.1 954 1 .
Chr1	stalkie_big_nohaplotig	CDS	164175463	164176416	99	-	0	ID=FBgn0026738.1.mrna1.cds1;Name=FBgn0026738.1;Parent=FBgn0026738.1.mrna1;Target=FBgn0026738.1 954 1 .
Chr1	stalkie_big_nohaplotig	mRNA	164171753	164174696	.	+	.	ID=FBgn0036501.1.mrna1;Name=FBgn0036501.1;Parent=FBgn0036501.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=780;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	164171753	164171982	100	+	.	ID=FBgn0036501.1.mrna1.exon1;Name=FBgn0036501.1;Parent=FBgn0036501.1.mrna1;Target=FBgn0036501.1 1 230 +
Chr1	stalkie_big_nohaplotig	exon	164174093	164174498	100	+	.	ID=FBgn0036501.1.mrna1.exon2;Name=FBgn0036501.1;Parent=FBgn0036501.1.mrna1;Target=FBgn0036501.1 231 636 +
Chr1	stalkie_big_nohaplotig	exon	164174553	164174696	100	+	.	ID=FBgn0036501.1.mrna1.exon3;Name=FBgn0036501.1;Parent=FBgn0036501.1.mrna1;Target=FBgn0036501.1 637 780 +
Chr1	stalkie_big_nohaplotig	CDS	164171753	164171982	100	+	0	ID=FBgn0036501.1.mrna1.cds1;Name=FBgn0036501.1;Parent=FBgn0036501.1.mrna1;Target=FBgn0036501.1 1 230 +
Chr1	stalkie_big_nohaplotig	CDS	164174093	164174498	100	+	2	ID=FBgn0036501.1.mrna1.cds2;Name=FBgn0036501.1;Parent=FBgn0036501.1.mrna1;Target=FBgn0036501.1 231 636 +
Chr1	stalkie_big_nohaplotig	CDS	164174553	164174696	100	+	0	ID=FBgn0036501.1.mrna1.cds3;Name=FBgn0036501.1;Parent=FBgn0036501.1.mrna1;Target=FBgn0036501.1 637 780 +
Chr1	stalkie_big_nohaplotig	mRNA	162787421	162842111	.	+	.	ID=FBgn0261548.1.mrna1;Name=FBgn0261548.1;Parent=FBgn0261548.1.path1;Dir=sensecoverage=100.0;identity=99.4;matches=2630;mismatches=6;indels=10;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	162787421	162787765	98	+	.	ID=FBgn0261548.1.mrna1.exon1;Name=FBgn0261548.1;Parent=FBgn0261548.1.mrna1;Target=FBgn0261548.1 1 343 +
Chr1	stalkie_big_nohaplotig	exon	162824312	162824701	99	+	.	ID=FBgn0261548.1.mrna1.exon2;Name=FBgn0261548.1;Parent=FBgn0261548.1.mrna1;Target=FBgn0261548.1 344 733 +
Chr1	stalkie_big_nohaplotig	exon	162840202	162842111	99	+	.	ID=FBgn0261548.1.mrna1.exon3;Name=FBgn0261548.1;Parent=FBgn0261548.1.mrna1;Target=FBgn0261548.1 734 2637 +
Chr1	stalkie_big_nohaplotig	CDS	162787423	162787607	97	+	0	ID=FBgn0261548.1.mrna1.cds1;Name=FBgn0261548.1;Parent=FBgn0261548.1.mrna1;Target=FBgn0261548.1 3 185 +
Chr1	stalkie_big_nohaplotig	mRNA	89272989	89279434	.	-	.	ID=FBgn0030260.1.mrna1;Name=FBgn0030260.1;Parent=FBgn0030260.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=483;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	89279191	89279434	100	-	.	ID=FBgn0030260.1.mrna1.exon1;Name=FBgn0030260.1;Parent=FBgn0030260.1.mrna1;Target=FBgn0030260.1 1 244 +
Chr1	stalkie_big_nohaplotig	exon	89278989	89279121	100	-	.	ID=FBgn0030260.1.mrna1.exon2;Name=FBgn0030260.1;Parent=FBgn0030260.1.mrna1;Target=FBgn0030260.1 245 377 +
Chr1	stalkie_big_nohaplotig	exon	89272989	89273094	100	-	.	ID=FBgn0030260.1.mrna1.exon3;Name=FBgn0030260.1;Parent=FBgn0030260.1.mrna1;Target=FBgn0030260.1 378 483 +
Chr1	stalkie_big_nohaplotig	CDS	89279191	89279434	100	-	0	ID=FBgn0030260.1.mrna1.cds1;Name=FBgn0030260.1;Parent=FBgn0030260.1.mrna1;Target=FBgn0030260.1 1 244 +
Chr1	stalkie_big_nohaplotig	CDS	89278989	89279121	100	-	1	ID=FBgn0030260.1.mrna1.cds2;Name=FBgn0030260.1;Parent=FBgn0030260.1.mrna1;Target=FBgn0030260.1 245 377 +
Chr1	stalkie_big_nohaplotig	CDS	89272989	89273094	100	-	2	ID=FBgn0030260.1.mrna1.cds3;Name=FBgn0030260.1;Parent=FBgn0030260.1.mrna1;Target=FBgn0030260.1 378 483 +
Chr2	stalkie_big_nohaplotig	mRNA	157179886	157188533	.	+	.	ID=FBgn0039178.1.mrna1;Name=FBgn0039178.1;Parent=FBgn0039178.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1739;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	157179886	157180013	100	+	.	ID=FBgn0039178.1.mrna1.exon1;Name=FBgn0039178.1;Parent=FBgn0039178.1.mrna1;Target=FBgn0039178.1 1 128 +
Chr2	stalkie_big_nohaplotig	exon	157185415	157185627	100	+	.	ID=FBgn0039178.1.mrna1.exon2;Name=FBgn0039178.1;Parent=FBgn0039178.1.mrna1;Target=FBgn0039178.1 129 341 +
Chr2	stalkie_big_nohaplotig	exon	157185682	157185827	100	+	.	ID=FBgn0039178.1.mrna1.exon3;Name=FBgn0039178.1;Parent=FBgn0039178.1.mrna1;Target=FBgn0039178.1 342 487 +
Chr2	stalkie_big_nohaplotig	exon	157185904	157185997	100	+	.	ID=FBgn0039178.1.mrna1.exon4;Name=FBgn0039178.1;Parent=FBgn0039178.1.mrna1;Target=FBgn0039178.1 488 581 +
Chr2	stalkie_big_nohaplotig	exon	157186287	157186441	100	+	.	ID=FBgn0039178.1.mrna1.exon5;Name=FBgn0039178.1;Parent=FBgn0039178.1.mrna1;Target=FBgn0039178.1 582 736 +
Chr2	stalkie_big_nohaplotig	exon	157186502	157186670	100	+	.	ID=FBgn0039178.1.mrna1.exon6;Name=FBgn0039178.1;Parent=FBgn0039178.1.mrna1;Target=FBgn0039178.1 737 905 +
Chr2	stalkie_big_nohaplotig	exon	157186778	157186913	100	+	.	ID=FBgn0039178.1.mrna1.exon7;Name=FBgn0039178.1;Parent=FBgn0039178.1.mrna1;Target=FBgn0039178.1 906 1041 +
Chr2	stalkie_big_nohaplotig	exon	157187560	157187713	100	+	.	ID=FBgn0039178.1.mrna1.exon8;Name=FBgn0039178.1;Parent=FBgn0039178.1.mrna1;Target=FBgn0039178.1 1042 1195 +
Chr2	stalkie_big_nohaplotig	exon	157187786	157187968	99	+	.	ID=FBgn0039178.1.mrna1.exon9;Name=FBgn0039178.1;Parent=FBgn0039178.1.mrna1;Target=FBgn0039178.1 1196 1378 +
Chr2	stalkie_big_nohaplotig	exon	157188103	157188278	100	+	.	ID=FBgn0039178.1.mrna1.exon10;Name=FBgn0039178.1;Parent=FBgn0039178.1.mrna1;Target=FBgn0039178.1 1379 1554 +
Chr2	stalkie_big_nohaplotig	exon	157188348	157188533	100	+	.	ID=FBgn0039178.1.mrna1.exon11;Name=FBgn0039178.1;Parent=FBgn0039178.1.mrna1;Target=FBgn0039178.1 1555 1740 +
Chr2	stalkie_big_nohaplotig	CDS	157179886	157180013	100	+	0	ID=FBgn0039178.1.mrna1.cds1;Name=FBgn0039178.1;Parent=FBgn0039178.1.mrna1;Target=FBgn0039178.1 1 128 +
Chr2	stalkie_big_nohaplotig	CDS	157185415	157185627	100	+	2	ID=FBgn0039178.1.mrna1.cds2;Name=FBgn0039178.1;Parent=FBgn0039178.1.mrna1;Target=FBgn0039178.1 129 341 +
Chr2	stalkie_big_nohaplotig	CDS	157185682	157185827	100	+	2	ID=FBgn0039178.1.mrna1.cds3;Name=FBgn0039178.1;Parent=FBgn0039178.1.mrna1;Target=FBgn0039178.1 342 487 +
Chr2	stalkie_big_nohaplotig	CDS	157185904	157185997	100	+	1	ID=FBgn0039178.1.mrna1.cds4;Name=FBgn0039178.1;Parent=FBgn0039178.1.mrna1;Target=FBgn0039178.1 488 581 +
Chr2	stalkie_big_nohaplotig	CDS	157186287	157186441	100	+	2	ID=FBgn0039178.1.mrna1.cds5;Name=FBgn0039178.1;Parent=FBgn0039178.1.mrna1;Target=FBgn0039178.1 582 736 +
Chr2	stalkie_big_nohaplotig	CDS	157186502	157186670	100	+	1	ID=FBgn0039178.1.mrna1.cds6;Name=FBgn0039178.1;Parent=FBgn0039178.1.mrna1;Target=FBgn0039178.1 737 905 +
Chr2	stalkie_big_nohaplotig	CDS	157186778	157186913	100	+	2	ID=FBgn0039178.1.mrna1.cds7;Name=FBgn0039178.1;Parent=FBgn0039178.1.mrna1;Target=FBgn0039178.1 906 1041 +
Chr2	stalkie_big_nohaplotig	CDS	157187560	157187713	100	+	0	ID=FBgn0039178.1.mrna1.cds8;Name=FBgn0039178.1;Parent=FBgn0039178.1.mrna1;Target=FBgn0039178.1 1042 1195 +
Chr2	stalkie_big_nohaplotig	CDS	157187786	157187968	99	+	1	ID=FBgn0039178.1.mrna1.cds9;Name=FBgn0039178.1;Parent=FBgn0039178.1.mrna1;Target=FBgn0039178.1 1196 1378 +
Chr2	stalkie_big_nohaplotig	CDS	157188103	157188278	100	+	1	ID=FBgn0039178.1.mrna1.cds10;Name=FBgn0039178.1;Parent=FBgn0039178.1.mrna1;Target=FBgn0039178.1 1379 1554 +
Chr2	stalkie_big_nohaplotig	CDS	157188348	157188533	100	+	0	ID=FBgn0039178.1.mrna1.cds11;Name=FBgn0039178.1;Parent=FBgn0039178.1.mrna1;Target=FBgn0039178.1 1555 1740 +
Chr2	stalkie_big_nohaplotig	mRNA	153702418	153704166	.	+	.	ID=FBgn0038202.1.mrna1;Name=FBgn0038202.1;Parent=FBgn0038202.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=1678;mismatches=8;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	153702418	153702936	99	+	.	ID=FBgn0038202.1.mrna1.exon1;Name=FBgn0038202.1;Parent=FBgn0038202.1.mrna1;Target=FBgn0038202.1 1 519 +
Chr2	stalkie_big_nohaplotig	exon	153703000	153704166	99	+	.	ID=FBgn0038202.1.mrna1.exon2;Name=FBgn0038202.1;Parent=FBgn0038202.1.mrna1;Target=FBgn0038202.1 520 1686 +
Chr2	stalkie_big_nohaplotig	CDS	153702418	153702936	99	+	0	ID=FBgn0038202.1.mrna1.cds1;Name=FBgn0038202.1;Parent=FBgn0038202.1.mrna1;Target=FBgn0038202.1 1 519 +
Chr2	stalkie_big_nohaplotig	CDS	153703000	153704166	99	+	0	ID=FBgn0038202.1.mrna1.cds2;Name=FBgn0038202.1;Parent=FBgn0038202.1.mrna1;Target=FBgn0038202.1 520 1686 +
Chr1	stalkie_big_nohaplotig	mRNA	82608947	83007909	.	+	.	ID=FBgn0263257.1.mrna1;Name=FBgn0263257.1;Parent=FBgn0263257.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=4798;mismatches=1;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	82608947	82609143	99	+	.	ID=FBgn0263257.1.mrna1.exon1;Name=FBgn0263257.1;Parent=FBgn0263257.1.mrna1;Target=FBgn0263257.1 1 198 +
Chr1	stalkie_big_nohaplotig	exon	82609220	82609407	100	+	.	ID=FBgn0263257.1.mrna1.exon2;Name=FBgn0263257.1;Parent=FBgn0263257.1.mrna1;Target=FBgn0263257.1 199 386 +
Chr1	stalkie_big_nohaplotig	exon	82669389	82669433	100	+	.	ID=FBgn0263257.1.mrna1.exon3;Name=FBgn0263257.1;Parent=FBgn0263257.1.mrna1;Target=FBgn0263257.1 387 431 +
Chr1	stalkie_big_nohaplotig	exon	82670834	82670969	100	+	.	ID=FBgn0263257.1.mrna1.exon4;Name=FBgn0263257.1;Parent=FBgn0263257.1.mrna1;Target=FBgn0263257.1 432 567 +
Chr1	stalkie_big_nohaplotig	exon	82735040	82735243	100	+	.	ID=FBgn0263257.1.mrna1.exon5;Name=FBgn0263257.1;Parent=FBgn0263257.1.mrna1;Target=FBgn0263257.1 568 771 +
Chr1	stalkie_big_nohaplotig	exon	82735298	82735405	100	+	.	ID=FBgn0263257.1.mrna1.exon6;Name=FBgn0263257.1;Parent=FBgn0263257.1.mrna1;Target=FBgn0263257.1 772 879 +
Chr1	stalkie_big_nohaplotig	exon	82735464	82735604	100	+	.	ID=FBgn0263257.1.mrna1.exon7;Name=FBgn0263257.1;Parent=FBgn0263257.1.mrna1;Target=FBgn0263257.1 880 1020 +
Chr1	stalkie_big_nohaplotig	exon	82735663	82735815	100	+	.	ID=FBgn0263257.1.mrna1.exon8;Name=FBgn0263257.1;Parent=FBgn0263257.1.mrna1;Target=FBgn0263257.1 1021 1173 +
Chr1	stalkie_big_nohaplotig	exon	82735877	82736007	100	+	.	ID=FBgn0263257.1.mrna1.exon9;Name=FBgn0263257.1;Parent=FBgn0263257.1.mrna1;Target=FBgn0263257.1 1174 1304 +
Chr1	stalkie_big_nohaplotig	exon	82813779	82813932	100	+	.	ID=FBgn0263257.1.mrna1.exon10;Name=FBgn0263257.1;Parent=FBgn0263257.1.mrna1;Target=FBgn0263257.1 1305 1458 +
Chr1	stalkie_big_nohaplotig	exon	82813993	82814393	99	+	.	ID=FBgn0263257.1.mrna1.exon11;Name=FBgn0263257.1;Parent=FBgn0263257.1.mrna1;Target=FBgn0263257.1 1459 1859 +
Chr1	stalkie_big_nohaplotig	exon	82814453	82814770	100	+	.	ID=FBgn0263257.1.mrna1.exon12;Name=FBgn0263257.1;Parent=FBgn0263257.1.mrna1;Target=FBgn0263257.1 1860 2177 +
Chr1	stalkie_big_nohaplotig	exon	82873305	82873521	100	+	.	ID=FBgn0263257.1.mrna1.exon13;Name=FBgn0263257.1;Parent=FBgn0263257.1.mrna1;Target=FBgn0263257.1 2178 2394 +
Chr1	stalkie_big_nohaplotig	exon	82973833	82974039	100	+	.	ID=FBgn0263257.1.mrna1.exon14;Name=FBgn0263257.1;Parent=FBgn0263257.1.mrna1;Target=FBgn0263257.1 2395 2601 +
Chr1	stalkie_big_nohaplotig	exon	82974104	82975086	100	+	.	ID=FBgn0263257.1.mrna1.exon15;Name=FBgn0263257.1;Parent=FBgn0263257.1.mrna1;Target=FBgn0263257.1 2602 3584 +
Chr1	stalkie_big_nohaplotig	exon	82975141	82975370	100	+	.	ID=FBgn0263257.1.mrna1.exon16;Name=FBgn0263257.1;Parent=FBgn0263257.1.mrna1;Target=FBgn0263257.1 3585 3814 +
Chr1	stalkie_big_nohaplotig	exon	83006809	83007131	100	+	.	ID=FBgn0263257.1.mrna1.exon17;Name=FBgn0263257.1;Parent=FBgn0263257.1.mrna1;Target=FBgn0263257.1 3815 4137 +
Chr1	stalkie_big_nohaplotig	exon	83007247	83007909	100	+	.	ID=FBgn0263257.1.mrna1.exon18;Name=FBgn0263257.1;Parent=FBgn0263257.1.mrna1;Target=FBgn0263257.1 4138 4800 +
Chr1	stalkie_big_nohaplotig	CDS	82608949	82609001	98	+	0	ID=FBgn0263257.1.mrna1.cds1;Name=FBgn0263257.1;Parent=FBgn0263257.1.mrna1;Target=FBgn0263257.1 3 56 +
ChrX	stalkie_big_nohaplotig	mRNA	76618350	76630841	.	+	.	ID=ORF125.mrna1;Name=ORF125;Parent=ORF125.path1;Dir=sensecoverage=100.0;identity=99.9;matches=2903;mismatches=4;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	76618350	76619003	100	+	.	ID=ORF125.mrna1.exon1;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 1 654 +
ChrX	stalkie_big_nohaplotig	exon	76619069	76619185	100	+	.	ID=ORF125.mrna1.exon2;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 655 771 +
ChrX	stalkie_big_nohaplotig	exon	76619244	76619336	100	+	.	ID=ORF125.mrna1.exon3;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 772 864 +
ChrX	stalkie_big_nohaplotig	exon	76619437	76619508	100	+	.	ID=ORF125.mrna1.exon4;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 865 936 +
ChrX	stalkie_big_nohaplotig	exon	76619564	76619680	100	+	.	ID=ORF125.mrna1.exon5;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 937 1053 +
ChrX	stalkie_big_nohaplotig	exon	76619740	76619856	100	+	.	ID=ORF125.mrna1.exon6;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 1054 1170 +
ChrX	stalkie_big_nohaplotig	exon	76619913	76620305	99	+	.	ID=ORF125.mrna1.exon7;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 1171 1563 +
ChrX	stalkie_big_nohaplotig	exon	76620807	76620887	100	+	.	ID=ORF125.mrna1.exon8;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 1564 1644 +
ChrX	stalkie_big_nohaplotig	exon	76620943	76621035	100	+	.	ID=ORF125.mrna1.exon9;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 1645 1737 +
ChrX	stalkie_big_nohaplotig	exon	76621099	76621275	98	+	.	ID=ORF125.mrna1.exon10;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 1738 1914 +
ChrX	stalkie_big_nohaplotig	exon	76624618	76624806	100	+	.	ID=ORF125.mrna1.exon11;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 1915 2103 +
ChrX	stalkie_big_nohaplotig	exon	76625261	76625302	100	+	.	ID=ORF125.mrna1.exon12;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2104 2145 +
ChrX	stalkie_big_nohaplotig	exon	76625369	76625443	100	+	.	ID=ORF125.mrna1.exon13;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2146 2220 +
ChrX	stalkie_big_nohaplotig	exon	76625533	76625598	100	+	.	ID=ORF125.mrna1.exon14;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2221 2286 +
ChrX	stalkie_big_nohaplotig	exon	76625681	76625863	100	+	.	ID=ORF125.mrna1.exon15;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2287 2469 +
ChrX	stalkie_big_nohaplotig	exon	76625913	76625969	100	+	.	ID=ORF125.mrna1.exon16;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2470 2526 +
ChrX	stalkie_big_nohaplotig	exon	76626298	76626330	100	+	.	ID=ORF125.mrna1.exon17;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2527 2559 +
ChrX	stalkie_big_nohaplotig	exon	76626927	76627007	100	+	.	ID=ORF125.mrna1.exon18;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2560 2640 +
ChrX	stalkie_big_nohaplotig	exon	76627129	76627188	100	+	.	ID=ORF125.mrna1.exon19;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2641 2700 +
ChrX	stalkie_big_nohaplotig	exon	76627327	76627380	100	+	.	ID=ORF125.mrna1.exon20;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2701 2754 +
ChrX	stalkie_big_nohaplotig	exon	76627482	76627529	100	+	.	ID=ORF125.mrna1.exon21;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2755 2802 +
ChrX	stalkie_big_nohaplotig	exon	76629523	76629579	100	+	.	ID=ORF125.mrna1.exon22;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2803 2859 +
ChrX	stalkie_big_nohaplotig	exon	76630794	76630841	100	+	.	ID=ORF125.mrna1.exon23;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2860 2907 +
ChrX	stalkie_big_nohaplotig	CDS	76618350	76619003	100	+	0	ID=ORF125.mrna1.cds1;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 1 654 +
ChrX	stalkie_big_nohaplotig	CDS	76619069	76619185	100	+	0	ID=ORF125.mrna1.cds2;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 655 771 +
ChrX	stalkie_big_nohaplotig	CDS	76619244	76619336	100	+	0	ID=ORF125.mrna1.cds3;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 772 864 +
ChrX	stalkie_big_nohaplotig	CDS	76619437	76619508	100	+	0	ID=ORF125.mrna1.cds4;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 865 936 +
ChrX	stalkie_big_nohaplotig	CDS	76619564	76619680	100	+	0	ID=ORF125.mrna1.cds5;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 937 1053 +
ChrX	stalkie_big_nohaplotig	CDS	76619740	76619856	100	+	0	ID=ORF125.mrna1.cds6;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 1054 1170 +
ChrX	stalkie_big_nohaplotig	CDS	76619913	76620305	99	+	0	ID=ORF125.mrna1.cds7;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 1171 1563 +
ChrX	stalkie_big_nohaplotig	CDS	76620807	76620887	100	+	0	ID=ORF125.mrna1.cds8;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 1564 1644 +
ChrX	stalkie_big_nohaplotig	CDS	76620943	76621035	100	+	0	ID=ORF125.mrna1.cds9;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 1645 1737 +
ChrX	stalkie_big_nohaplotig	CDS	76621099	76621275	98	+	0	ID=ORF125.mrna1.cds10;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 1738 1914 +
ChrX	stalkie_big_nohaplotig	CDS	76624618	76624806	100	+	0	ID=ORF125.mrna1.cds11;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 1915 2103 +
ChrX	stalkie_big_nohaplotig	CDS	76625261	76625302	100	+	0	ID=ORF125.mrna1.cds12;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2104 2145 +
ChrX	stalkie_big_nohaplotig	CDS	76625369	76625443	100	+	0	ID=ORF125.mrna1.cds13;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2146 2220 +
ChrX	stalkie_big_nohaplotig	CDS	76625533	76625598	100	+	0	ID=ORF125.mrna1.cds14;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2221 2286 +
ChrX	stalkie_big_nohaplotig	CDS	76625681	76625863	100	+	0	ID=ORF125.mrna1.cds15;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2287 2469 +
ChrX	stalkie_big_nohaplotig	CDS	76625913	76625969	100	+	0	ID=ORF125.mrna1.cds16;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2470 2526 +
ChrX	stalkie_big_nohaplotig	CDS	76626298	76626330	100	+	0	ID=ORF125.mrna1.cds17;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2527 2559 +
ChrX	stalkie_big_nohaplotig	CDS	76626927	76627007	100	+	0	ID=ORF125.mrna1.cds18;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2560 2640 +
ChrX	stalkie_big_nohaplotig	CDS	76627129	76627188	100	+	0	ID=ORF125.mrna1.cds19;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2641 2700 +
ChrX	stalkie_big_nohaplotig	CDS	76627327	76627380	100	+	0	ID=ORF125.mrna1.cds20;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2701 2754 +
ChrX	stalkie_big_nohaplotig	CDS	76627482	76627529	100	+	0	ID=ORF125.mrna1.cds21;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2755 2802 +
ChrX	stalkie_big_nohaplotig	CDS	76629523	76629579	100	+	0	ID=ORF125.mrna1.cds22;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2803 2859 +
ChrX	stalkie_big_nohaplotig	CDS	76630794	76630841	100	+	0	ID=ORF125.mrna1.cds23;Name=ORF125;Parent=ORF125.mrna1;Target=ORF125 2860 2907 +
ChrX	stalkie_big_nohaplotig	mRNA	66468842	66518960	.	+	.	ID=FBgn0035522.1.mrna1;Name=FBgn0035522.1;Parent=FBgn0035522.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3450;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	66468842	66468946	100	+	.	ID=FBgn0035522.1.mrna1.exon1;Name=FBgn0035522.1;Parent=FBgn0035522.1.mrna1;Target=FBgn0035522.1 1 105 +
ChrX	stalkie_big_nohaplotig	exon	66512984	66513299	100	+	.	ID=FBgn0035522.1.mrna1.exon2;Name=FBgn0035522.1;Parent=FBgn0035522.1.mrna1;Target=FBgn0035522.1 106 421 +
ChrX	stalkie_big_nohaplotig	exon	66513361	66513598	100	+	.	ID=FBgn0035522.1.mrna1.exon3;Name=FBgn0035522.1;Parent=FBgn0035522.1.mrna1;Target=FBgn0035522.1 422 659 +
ChrX	stalkie_big_nohaplotig	exon	66516114	66516276	100	+	.	ID=FBgn0035522.1.mrna1.exon4;Name=FBgn0035522.1;Parent=FBgn0035522.1.mrna1;Target=FBgn0035522.1 660 822 +
ChrX	stalkie_big_nohaplotig	exon	66516333	66518960	100	+	.	ID=FBgn0035522.1.mrna1.exon5;Name=FBgn0035522.1;Parent=FBgn0035522.1.mrna1;Target=FBgn0035522.1 823 3450 +
ChrX	stalkie_big_nohaplotig	CDS	66468842	66468946	100	+	0	ID=FBgn0035522.1.mrna1.cds1;Name=FBgn0035522.1;Parent=FBgn0035522.1.mrna1;Target=FBgn0035522.1 1 105 +
ChrX	stalkie_big_nohaplotig	CDS	66512984	66513299	100	+	0	ID=FBgn0035522.1.mrna1.cds2;Name=FBgn0035522.1;Parent=FBgn0035522.1.mrna1;Target=FBgn0035522.1 106 421 +
ChrX	stalkie_big_nohaplotig	CDS	66513361	66513598	100	+	1	ID=FBgn0035522.1.mrna1.cds3;Name=FBgn0035522.1;Parent=FBgn0035522.1.mrna1;Target=FBgn0035522.1 422 659 +
ChrX	stalkie_big_nohaplotig	CDS	66516114	66516276	100	+	2	ID=FBgn0035522.1.mrna1.cds4;Name=FBgn0035522.1;Parent=FBgn0035522.1.mrna1;Target=FBgn0035522.1 660 822 +
ChrX	stalkie_big_nohaplotig	CDS	66516333	66518960	100	+	0	ID=FBgn0035522.1.mrna1.cds5;Name=FBgn0035522.1;Parent=FBgn0035522.1.mrna1;Target=FBgn0035522.1 823 3450 +
ChrX	stalkie_big_nohaplotig	mRNA	66569314	66570807	.	-	.	ID=ORF760.mrna1;Name=ORF760;Parent=ORF760.path1;Dir=sensecoverage=100.0;identity=95.5;matches=1390;mismatches=44;indels=21;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	66570520	66570807	100	-	.	ID=ORF760.mrna1.exon1;Name=ORF760;Parent=ORF760.mrna1;Target=ORF760 1 288 +
ChrX	stalkie_big_nohaplotig	exon	66569314	66570459	94	-	.	ID=ORF760.mrna1.exon2;Name=ORF760;Parent=ORF760.mrna1;Target=ORF760 289 1455 +
ChrX	stalkie_big_nohaplotig	CDS	66570520	66570807	100	-	0	ID=ORF760.mrna1.cds1;Name=ORF760;Parent=ORF760.mrna1;Target=ORF760 1 288 +
ChrX	stalkie_big_nohaplotig	CDS	66569314	66570459	94	-	0	ID=ORF760.mrna1.cds2;Name=ORF760;Parent=ORF760.mrna1;Target=ORF760 289 1455 +
ChrX	stalkie_big_nohaplotig	mRNA	15916629	15920149	.	+	.	ID=FBgn0261619.2.mrna1;Name=FBgn0261619.2;Parent=FBgn0261619.2.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2039;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	15916629	15916642	100	+	.	ID=FBgn0261619.2.mrna1.exon1;Name=FBgn0261619.2;Parent=FBgn0261619.2.mrna1;Target=FBgn0261619.2 1 14 +
ChrX	stalkie_big_nohaplotig	exon	15917099	15917141	100	+	.	ID=FBgn0261619.2.mrna1.exon2;Name=FBgn0261619.2;Parent=FBgn0261619.2.mrna1;Target=FBgn0261619.2 15 57 +
ChrX	stalkie_big_nohaplotig	exon	15918090	15918834	100	+	.	ID=FBgn0261619.2.mrna1.exon3;Name=FBgn0261619.2;Parent=FBgn0261619.2.mrna1;Target=FBgn0261619.2 58 802 +
ChrX	stalkie_big_nohaplotig	exon	15918912	15920149	99	+	.	ID=FBgn0261619.2.mrna1.exon4;Name=FBgn0261619.2;Parent=FBgn0261619.2.mrna1;Target=FBgn0261619.2 803 2040 +
ChrX	stalkie_big_nohaplotig	CDS	15916629	15916642	100	+	0	ID=FBgn0261619.2.mrna1.cds1;Name=FBgn0261619.2;Parent=FBgn0261619.2.mrna1;Target=FBgn0261619.2 1 14 +
ChrX	stalkie_big_nohaplotig	CDS	15917099	15917141	100	+	2	ID=FBgn0261619.2.mrna1.cds2;Name=FBgn0261619.2;Parent=FBgn0261619.2.mrna1;Target=FBgn0261619.2 15 57 +
ChrX	stalkie_big_nohaplotig	CDS	15918090	15918834	100	+	0	ID=FBgn0261619.2.mrna1.cds3;Name=FBgn0261619.2;Parent=FBgn0261619.2.mrna1;Target=FBgn0261619.2 58 802 +
ChrX	stalkie_big_nohaplotig	CDS	15918912	15920149	99	+	1	ID=FBgn0261619.2.mrna1.cds4;Name=FBgn0261619.2;Parent=FBgn0261619.2.mrna1;Target=FBgn0261619.2 803 2040 +
Chr2	stalkie_big_nohaplotig	mRNA	104743986	104745074	.	-	.	ID=FBgn0037822.1.mrna1;Name=FBgn0037822.1;Parent=FBgn0037822.1.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1089;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	104743986	104745074	100	-	.	ID=FBgn0037822.1.mrna1.exon1;Name=FBgn0037822.1;Parent=FBgn0037822.1.mrna1;Target=FBgn0037822.1 1089 1 .
Chr2	stalkie_big_nohaplotig	CDS	104743986	104745074	100	-	0	ID=FBgn0037822.1.mrna1.cds1;Name=FBgn0037822.1;Parent=FBgn0037822.1.mrna1;Target=FBgn0037822.1 1089 1 .
Chr2	stalkie_big_nohaplotig	mRNA	104750229	104757571	.	+	.	ID=FBgn0037891.1.mrna1;Name=FBgn0037891.1;Parent=FBgn0037891.1.path1;Dir=sensecoverage=100.0;identity=96.9;matches=1271;mismatches=0;indels=40;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	104750229	104750327	100	+	.	ID=FBgn0037891.1.mrna1.exon1;Name=FBgn0037891.1;Parent=FBgn0037891.1.mrna1;Target=FBgn0037891.1 1 99 +
Chr2	stalkie_big_nohaplotig	exon	104750582	104750685	100	+	.	ID=FBgn0037891.1.mrna1.exon2;Name=FBgn0037891.1;Parent=FBgn0037891.1.mrna1;Target=FBgn0037891.1 100 203 +
Chr2	stalkie_big_nohaplotig	exon	104750740	104750850	100	+	.	ID=FBgn0037891.1.mrna1.exon3;Name=FBgn0037891.1;Parent=FBgn0037891.1.mrna1;Target=FBgn0037891.1 204 314 +
Chr2	stalkie_big_nohaplotig	exon	104752390	104753013	94	+	.	ID=FBgn0037891.1.mrna1.exon4;Name=FBgn0037891.1;Parent=FBgn0037891.1.mrna1;Target=FBgn0037891.1 315 971 +
Chr2	stalkie_big_nohaplotig	exon	104753077	104753221	100	+	.	ID=FBgn0037891.1.mrna1.exon5;Name=FBgn0037891.1;Parent=FBgn0037891.1.mrna1;Target=FBgn0037891.1 972 1116 +
Chr2	stalkie_big_nohaplotig	exon	104757381	104757571	99	+	.	ID=FBgn0037891.1.mrna1.exon6;Name=FBgn0037891.1;Parent=FBgn0037891.1.mrna1;Target=FBgn0037891.1 1117 1308 +
Chr2	stalkie_big_nohaplotig	CDS	104750229	104750327	100	+	0	ID=FBgn0037891.1.mrna1.cds1;Name=FBgn0037891.1;Parent=FBgn0037891.1.mrna1;Target=FBgn0037891.1 1 99 +
Chr2	stalkie_big_nohaplotig	CDS	104750582	104750685	100	+	0	ID=FBgn0037891.1.mrna1.cds2;Name=FBgn0037891.1;Parent=FBgn0037891.1.mrna1;Target=FBgn0037891.1 100 203 +
Chr2	stalkie_big_nohaplotig	CDS	104750740	104750850	100	+	2	ID=FBgn0037891.1.mrna1.cds3;Name=FBgn0037891.1;Parent=FBgn0037891.1.mrna1;Target=FBgn0037891.1 204 314 +
Chr2	stalkie_big_nohaplotig	CDS	104752390	104753013	94	+	2	ID=FBgn0037891.1.mrna1.cds4;Name=FBgn0037891.1;Parent=FBgn0037891.1.mrna1;Target=FBgn0037891.1 315 971 +
Chr2	stalkie_big_nohaplotig	CDS	104753077	104753221	100	+	2	ID=FBgn0037891.1.mrna1.cds5;Name=FBgn0037891.1;Parent=FBgn0037891.1.mrna1;Target=FBgn0037891.1 972 1116 +
Chr2	stalkie_big_nohaplotig	CDS	104757381	104757571	99	+	0	ID=FBgn0037891.1.mrna1.cds6;Name=FBgn0037891.1;Parent=FBgn0037891.1.mrna1;Target=FBgn0037891.1 1117 1308 +
ChrX	stalkie_big_nohaplotig	mRNA	57200704	57201704	.	+	.	ID=ORF2180.mrna1;Name=ORF2180;Parent=ORF2180.path1;Dir=sensecoverage=99.9;identity=98.3;matches=887;mismatches=15;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	57200704	57201502	98	+	.	ID=ORF2180.mrna1.exon1;Name=ORF2180;Parent=ORF2180.mrna1;Target=ORF2180 1 799 +
ChrX	stalkie_big_nohaplotig	exon	57201602	57201704	100	+	.	ID=ORF2180.mrna1.exon2;Name=ORF2180;Parent=ORF2180.mrna1;Target=ORF2180 800 902 +
ChrX	stalkie_big_nohaplotig	CDS	57200704	57201502	98	+	0	ID=ORF2180.mrna1.cds1;Name=ORF2180;Parent=ORF2180.mrna1;Target=ORF2180 1 799 +
ChrX	stalkie_big_nohaplotig	CDS	57201602	57201702	100	+	1	ID=ORF2180.mrna1.cds2;Name=ORF2180;Parent=ORF2180.mrna1;Target=ORF2180 800 900 +
ChrX	stalkie_big_nohaplotig	mRNA	5604647	5605609	.	-	.	ID=ORF1915.mrna1;Name=ORF1915;Parent=ORF1915.path1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=957;mismatches=6;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	5604647	5605609	99	-	.	ID=ORF1915.mrna1.exon1;Name=ORF1915;Parent=ORF1915.mrna1;Target=ORF1915 963 1 .
ChrX	stalkie_big_nohaplotig	CDS	5604647	5605609	99	-	0	ID=ORF1915.mrna1.cds1;Name=ORF1915;Parent=ORF1915.mrna1;Target=ORF1915 963 1 .
ChrX	stalkie_big_nohaplotig	mRNA	5653280	5654098	.	+	.	ID=ORF2704.mrna1;Name=ORF2704;Parent=ORF2704.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=818;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	5653280	5654098	99	+	.	ID=ORF2704.mrna1.exon1;Name=ORF2704;Parent=ORF2704.mrna1;Target=ORF2704 819 1 .
ChrX	stalkie_big_nohaplotig	CDS	5653280	5654098	99	+	0	ID=ORF2704.mrna1.cds1;Name=ORF2704;Parent=ORF2704.mrna1;Target=ORF2704 819 1 .
ChrX	stalkie_big_nohaplotig	mRNA	5688527	5694503	.	-	.	ID=FBgn0040340.2.mrna1;Name=FBgn0040340.2;Parent=FBgn0040340.2.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1114;mismatches=5;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	5694345	5694503	100	-	.	ID=FBgn0040340.2.mrna1.exon1;Name=FBgn0040340.2;Parent=FBgn0040340.2.mrna1;Target=FBgn0040340.2 1 159 +
ChrX	stalkie_big_nohaplotig	exon	5691682	5691761	100	-	.	ID=FBgn0040340.2.mrna1.exon2;Name=FBgn0040340.2;Parent=FBgn0040340.2.mrna1;Target=FBgn0040340.2 160 239 +
ChrX	stalkie_big_nohaplotig	exon	5691482	5691590	99	-	.	ID=FBgn0040340.2.mrna1.exon3;Name=FBgn0040340.2;Parent=FBgn0040340.2.mrna1;Target=FBgn0040340.2 240 348 +
ChrX	stalkie_big_nohaplotig	exon	5689028	5689359	99	-	.	ID=FBgn0040340.2.mrna1.exon4;Name=FBgn0040340.2;Parent=FBgn0040340.2.mrna1;Target=FBgn0040340.2 349 680 +
ChrX	stalkie_big_nohaplotig	exon	5688527	5688965	99	-	.	ID=FBgn0040340.2.mrna1.exon5;Name=FBgn0040340.2;Parent=FBgn0040340.2.mrna1;Target=FBgn0040340.2 681 1119 +
ChrX	stalkie_big_nohaplotig	CDS	5694345	5694503	100	-	0	ID=FBgn0040340.2.mrna1.cds1;Name=FBgn0040340.2;Parent=FBgn0040340.2.mrna1;Target=FBgn0040340.2 1 159 +
ChrX	stalkie_big_nohaplotig	CDS	5691682	5691761	100	-	0	ID=FBgn0040340.2.mrna1.cds2;Name=FBgn0040340.2;Parent=FBgn0040340.2.mrna1;Target=FBgn0040340.2 160 239 +
ChrX	stalkie_big_nohaplotig	CDS	5691482	5691590	99	-	2	ID=FBgn0040340.2.mrna1.cds3;Name=FBgn0040340.2;Parent=FBgn0040340.2.mrna1;Target=FBgn0040340.2 240 348 +
ChrX	stalkie_big_nohaplotig	CDS	5689028	5689359	99	-	0	ID=FBgn0040340.2.mrna1.cds4;Name=FBgn0040340.2;Parent=FBgn0040340.2.mrna1;Target=FBgn0040340.2 349 680 +
ChrX	stalkie_big_nohaplotig	CDS	5688527	5688965	99	-	2	ID=FBgn0040340.2.mrna1.cds5;Name=FBgn0040340.2;Parent=FBgn0040340.2.mrna1;Target=FBgn0040340.2 681 1119 +
ChrX	stalkie_big_nohaplotig	mRNA	45505162	45536056	.	+	.	ID=FBgn0002543.1.mrna1;Name=FBgn0002543.1;Parent=FBgn0002543.1.path1;Dir=sensecoverage=99.7;identity=99.9;matches=2810;mismatches=1;indels=1;unknowns=9
ChrX	stalkie_big_nohaplotig	exon	45505162	45505297	99	+	.	ID=FBgn0002543.1.mrna1.exon1;Name=FBgn0002543.1;Parent=FBgn0002543.1.mrna1;Target=FBgn0002543.1 9 145 +
ChrX	stalkie_big_nohaplotig	exon	45509297	45509428	99	+	.	ID=FBgn0002543.1.mrna1.exon2;Name=FBgn0002543.1;Parent=FBgn0002543.1.mrna1;Target=FBgn0002543.1 146 277 +
ChrX	stalkie_big_nohaplotig	exon	45509920	45510857	100	+	.	ID=FBgn0002543.1.mrna1.exon3;Name=FBgn0002543.1;Parent=FBgn0002543.1.mrna1;Target=FBgn0002543.1 278 1215 +
ChrX	stalkie_big_nohaplotig	exon	45510926	45511045	100	+	.	ID=FBgn0002543.1.mrna1.exon4;Name=FBgn0002543.1;Parent=FBgn0002543.1.mrna1;Target=FBgn0002543.1 1216 1335 +
ChrX	stalkie_big_nohaplotig	exon	45511246	45511702	100	+	.	ID=FBgn0002543.1.mrna1.exon5;Name=FBgn0002543.1;Parent=FBgn0002543.1.mrna1;Target=FBgn0002543.1 1336 1792 +
ChrX	stalkie_big_nohaplotig	exon	45519015	45519110	100	+	.	ID=FBgn0002543.1.mrna1.exon6;Name=FBgn0002543.1;Parent=FBgn0002543.1.mrna1;Target=FBgn0002543.1 1793 1888 +
ChrX	stalkie_big_nohaplotig	exon	45519329	45519575	100	+	.	ID=FBgn0002543.1.mrna1.exon7;Name=FBgn0002543.1;Parent=FBgn0002543.1.mrna1;Target=FBgn0002543.1 1889 2135 +
ChrX	stalkie_big_nohaplotig	exon	45519701	45519864	100	+	.	ID=FBgn0002543.1.mrna1.exon8;Name=FBgn0002543.1;Parent=FBgn0002543.1.mrna1;Target=FBgn0002543.1 2136 2299 +
ChrX	stalkie_big_nohaplotig	exon	45527108	45527339	100	+	.	ID=FBgn0002543.1.mrna1.exon9;Name=FBgn0002543.1;Parent=FBgn0002543.1.mrna1;Target=FBgn0002543.1 2300 2531 +
ChrX	stalkie_big_nohaplotig	exon	45535759	45536056	100	+	.	ID=FBgn0002543.1.mrna1.exon10;Name=FBgn0002543.1;Parent=FBgn0002543.1.mrna1;Target=FBgn0002543.1 2532 2829 +
ChrX	stalkie_big_nohaplotig	CDS	45505162	45505247	98	+	0	ID=FBgn0002543.1.mrna1.cds1;Name=FBgn0002543.1;Parent=FBgn0002543.1.mrna1;Target=FBgn0002543.1 9 95 +
Chr2	stalkie_big_nohaplotig	mRNA	108616750	108617760	.	+	.	ID=ORF1968.mrna1;Name=ORF1968;Parent=ORF1968.path1;Dir=sensecoverage=100.0;identity=97.8;matches=930;mismatches=15;indels=6;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	108616750	108616994	99	+	.	ID=ORF1968.mrna1.exon1;Name=ORF1968;Parent=ORF1968.mrna1;Target=ORF1968 1 245 +
Chr2	stalkie_big_nohaplotig	exon	108617061	108617760	97	+	.	ID=ORF1968.mrna1.exon2;Name=ORF1968;Parent=ORF1968.mrna1;Target=ORF1968 246 951 +
Chr2	stalkie_big_nohaplotig	CDS	108616750	108616994	99	+	0	ID=ORF1968.mrna1.cds1;Name=ORF1968;Parent=ORF1968.mrna1;Target=ORF1968 1 245 +
Chr2	stalkie_big_nohaplotig	CDS	108617061	108617760	97	+	2	ID=ORF1968.mrna1.cds2;Name=ORF1968;Parent=ORF1968.mrna1;Target=ORF1968 246 951 +
Chr2	stalkie_big_nohaplotig	mRNA	108836096	108837730	.	+	.	ID=FBgn0033963.2.mrna1;Name=FBgn0033963.2;Parent=FBgn0033963.2.path1;Dir=sensecoverage=100.0;identity=99.1;matches=1412;mismatches=13;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	108836096	108836169	98	+	.	ID=FBgn0033963.2.mrna1.exon1;Name=FBgn0033963.2;Parent=FBgn0033963.2.mrna1;Target=FBgn0033963.2 1 74 +
Chr2	stalkie_big_nohaplotig	exon	108836380	108837730	99	+	.	ID=FBgn0033963.2.mrna1.exon2;Name=FBgn0033963.2;Parent=FBgn0033963.2.mrna1;Target=FBgn0033963.2 75 1425 +
Chr2	stalkie_big_nohaplotig	CDS	108836096	108836169	98	+	0	ID=FBgn0033963.2.mrna1.cds1;Name=FBgn0033963.2;Parent=FBgn0033963.2.mrna1;Target=FBgn0033963.2 1 74 +
Chr2	stalkie_big_nohaplotig	CDS	108836380	108837730	99	+	2	ID=FBgn0033963.2.mrna1.cds2;Name=FBgn0033963.2;Parent=FBgn0033963.2.mrna1;Target=FBgn0033963.2 75 1425 +
Chr2	stalkie_big_nohaplotig	mRNA	63328524	63329159	.	-	.	ID=FBgn0034636.mrna1;Name=FBgn0034636;Parent=FBgn0034636.path1;Dir=sensecoverage=100.0;identity=100.0;matches=573;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	63329027	63329159	100	-	.	ID=FBgn0034636.mrna1.exon1;Name=FBgn0034636;Parent=FBgn0034636.mrna1;Target=FBgn0034636 1 133 +
Chr2	stalkie_big_nohaplotig	exon	63328524	63328963	100	-	.	ID=FBgn0034636.mrna1.exon2;Name=FBgn0034636;Parent=FBgn0034636.mrna1;Target=FBgn0034636 134 573 +
Chr2	stalkie_big_nohaplotig	CDS	63329027	63329159	100	-	0	ID=FBgn0034636.mrna1.cds1;Name=FBgn0034636;Parent=FBgn0034636.mrna1;Target=FBgn0034636 1 133 +
Chr2	stalkie_big_nohaplotig	CDS	63328524	63328963	100	-	1	ID=FBgn0034636.mrna1.cds2;Name=FBgn0034636;Parent=FBgn0034636.mrna1;Target=FBgn0034636 134 573 +
Chr2	stalkie_big_nohaplotig	mRNA	97432931	97467128	.	+	.	ID=FBgn0037344.1.mrna1;Name=FBgn0037344.1;Parent=FBgn0037344.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=6846;mismatches=6;indels=3;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	97432931	97433269	97	+	.	ID=FBgn0037344.1.mrna1.exon1;Name=FBgn0037344.1;Parent=FBgn0037344.1.mrna1;Target=FBgn0037344.1 1 342 +
Chr2	stalkie_big_nohaplotig	exon	97445491	97447821	100	+	.	ID=FBgn0037344.1.mrna1.exon2;Name=FBgn0037344.1;Parent=FBgn0037344.1.mrna1;Target=FBgn0037344.1 343 2673 +
Chr2	stalkie_big_nohaplotig	exon	97449360	97453176	99	+	.	ID=FBgn0037344.1.mrna1.exon3;Name=FBgn0037344.1;Parent=FBgn0037344.1.mrna1;Target=FBgn0037344.1 2674 6490 +
Chr2	stalkie_big_nohaplotig	exon	97465111	97465187	100	+	.	ID=FBgn0037344.1.mrna1.exon4;Name=FBgn0037344.1;Parent=FBgn0037344.1.mrna1;Target=FBgn0037344.1 6491 6567 +
Chr2	stalkie_big_nohaplotig	exon	97466754	97466882	100	+	.	ID=FBgn0037344.1.mrna1.exon5;Name=FBgn0037344.1;Parent=FBgn0037344.1.mrna1;Target=FBgn0037344.1 6568 6696 +
Chr2	stalkie_big_nohaplotig	exon	97466970	97467128	100	+	.	ID=FBgn0037344.1.mrna1.exon6;Name=FBgn0037344.1;Parent=FBgn0037344.1.mrna1;Target=FBgn0037344.1 6697 6855 +
Chr2	stalkie_big_nohaplotig	CDS	97432931	97433269	97	+	0	ID=FBgn0037344.1.mrna1.cds1;Name=FBgn0037344.1;Parent=FBgn0037344.1.mrna1;Target=FBgn0037344.1 1 342 +
Chr2	stalkie_big_nohaplotig	CDS	97445491	97447821	100	+	0	ID=FBgn0037344.1.mrna1.cds2;Name=FBgn0037344.1;Parent=FBgn0037344.1.mrna1;Target=FBgn0037344.1 343 2673 +
Chr2	stalkie_big_nohaplotig	CDS	97449360	97453176	99	+	0	ID=FBgn0037344.1.mrna1.cds3;Name=FBgn0037344.1;Parent=FBgn0037344.1.mrna1;Target=FBgn0037344.1 2674 6490 +
Chr2	stalkie_big_nohaplotig	CDS	97465111	97465187	100	+	1	ID=FBgn0037344.1.mrna1.cds4;Name=FBgn0037344.1;Parent=FBgn0037344.1.mrna1;Target=FBgn0037344.1 6491 6567 +
Chr2	stalkie_big_nohaplotig	CDS	97466754	97466882	100	+	0	ID=FBgn0037344.1.mrna1.cds5;Name=FBgn0037344.1;Parent=FBgn0037344.1.mrna1;Target=FBgn0037344.1 6568 6696 +
Chr2	stalkie_big_nohaplotig	CDS	97466970	97467128	100	+	0	ID=FBgn0037344.1.mrna1.cds6;Name=FBgn0037344.1;Parent=FBgn0037344.1.mrna1;Target=FBgn0037344.1 6697 6855 +
Chr2	stalkie_big_nohaplotig	mRNA	41852111	41855215	.	-	.	ID=FBgn0002069.1.mrna1;Name=FBgn0002069.1;Parent=FBgn0002069.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=1657;mismatches=8;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	41855183	41855215	100	-	.	ID=FBgn0002069.1.mrna1.exon1;Name=FBgn0002069.1;Parent=FBgn0002069.1.mrna1;Target=FBgn0002069.1 1 33 +
Chr2	stalkie_big_nohaplotig	exon	41854606	41854734	100	-	.	ID=FBgn0002069.1.mrna1.exon2;Name=FBgn0002069.1;Parent=FBgn0002069.1.mrna1;Target=FBgn0002069.1 34 162 +
Chr2	stalkie_big_nohaplotig	exon	41854215	41854531	100	-	.	ID=FBgn0002069.1.mrna1.exon3;Name=FBgn0002069.1;Parent=FBgn0002069.1.mrna1;Target=FBgn0002069.1 163 479 +
Chr2	stalkie_big_nohaplotig	exon	41853978	41854155	100	-	.	ID=FBgn0002069.1.mrna1.exon4;Name=FBgn0002069.1;Parent=FBgn0002069.1.mrna1;Target=FBgn0002069.1 480 657 +
Chr2	stalkie_big_nohaplotig	exon	41853689	41853917	98	-	.	ID=FBgn0002069.1.mrna1.exon5;Name=FBgn0002069.1;Parent=FBgn0002069.1.mrna1;Target=FBgn0002069.1 658 886 +
Chr2	stalkie_big_nohaplotig	exon	41852330	41852947	99	-	.	ID=FBgn0002069.1.mrna1.exon6;Name=FBgn0002069.1;Parent=FBgn0002069.1.mrna1;Target=FBgn0002069.1 887 1504 +
Chr2	stalkie_big_nohaplotig	exon	41852111	41852271	100	-	.	ID=FBgn0002069.1.mrna1.exon7;Name=FBgn0002069.1;Parent=FBgn0002069.1.mrna1;Target=FBgn0002069.1 1505 1665 +
Chr2	stalkie_big_nohaplotig	CDS	41855183	41855215	100	-	0	ID=FBgn0002069.1.mrna1.cds1;Name=FBgn0002069.1;Parent=FBgn0002069.1.mrna1;Target=FBgn0002069.1 1 33 +
Chr2	stalkie_big_nohaplotig	CDS	41854606	41854734	100	-	0	ID=FBgn0002069.1.mrna1.cds2;Name=FBgn0002069.1;Parent=FBgn0002069.1.mrna1;Target=FBgn0002069.1 34 162 +
Chr2	stalkie_big_nohaplotig	CDS	41854215	41854531	100	-	0	ID=FBgn0002069.1.mrna1.cds3;Name=FBgn0002069.1;Parent=FBgn0002069.1.mrna1;Target=FBgn0002069.1 163 479 +
Chr2	stalkie_big_nohaplotig	CDS	41853978	41854155	100	-	2	ID=FBgn0002069.1.mrna1.cds4;Name=FBgn0002069.1;Parent=FBgn0002069.1.mrna1;Target=FBgn0002069.1 480 657 +
Chr2	stalkie_big_nohaplotig	CDS	41853689	41853917	98	-	0	ID=FBgn0002069.1.mrna1.cds5;Name=FBgn0002069.1;Parent=FBgn0002069.1.mrna1;Target=FBgn0002069.1 658 886 +
Chr2	stalkie_big_nohaplotig	CDS	41852330	41852947	99	-	1	ID=FBgn0002069.1.mrna1.cds6;Name=FBgn0002069.1;Parent=FBgn0002069.1.mrna1;Target=FBgn0002069.1 887 1504 +
Chr2	stalkie_big_nohaplotig	CDS	41852111	41852271	100	-	1	ID=FBgn0002069.1.mrna1.cds7;Name=FBgn0002069.1;Parent=FBgn0002069.1.mrna1;Target=FBgn0002069.1 1505 1665 +
Chr2	stalkie_big_nohaplotig	mRNA	19658798	19665386	.	+	.	ID=FBgn0050394.1.mrna1;Name=FBgn0050394.1;Parent=FBgn0050394.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2855;mismatches=7;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	19658798	19658908	100	+	.	ID=FBgn0050394.1.mrna1.exon1;Name=FBgn0050394.1;Parent=FBgn0050394.1.mrna1;Target=FBgn0050394.1 1 111 +
Chr2	stalkie_big_nohaplotig	exon	19660601	19660718	100	+	.	ID=FBgn0050394.1.mrna1.exon2;Name=FBgn0050394.1;Parent=FBgn0050394.1.mrna1;Target=FBgn0050394.1 112 229 +
Chr2	stalkie_big_nohaplotig	exon	19660822	19661227	100	+	.	ID=FBgn0050394.1.mrna1.exon3;Name=FBgn0050394.1;Parent=FBgn0050394.1.mrna1;Target=FBgn0050394.1 230 635 +
Chr2	stalkie_big_nohaplotig	exon	19661297	19661445	100	+	.	ID=FBgn0050394.1.mrna1.exon4;Name=FBgn0050394.1;Parent=FBgn0050394.1.mrna1;Target=FBgn0050394.1 636 784 +
Chr2	stalkie_big_nohaplotig	exon	19661501	19661637	100	+	.	ID=FBgn0050394.1.mrna1.exon5;Name=FBgn0050394.1;Parent=FBgn0050394.1.mrna1;Target=FBgn0050394.1 785 921 +
Chr2	stalkie_big_nohaplotig	exon	19663446	19665386	99	+	.	ID=FBgn0050394.1.mrna1.exon6;Name=FBgn0050394.1;Parent=FBgn0050394.1.mrna1;Target=FBgn0050394.1 922 2862 +
Chr2	stalkie_big_nohaplotig	CDS	19658798	19658908	100	+	0	ID=FBgn0050394.1.mrna1.cds1;Name=FBgn0050394.1;Parent=FBgn0050394.1.mrna1;Target=FBgn0050394.1 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	19660601	19660718	100	+	0	ID=FBgn0050394.1.mrna1.cds2;Name=FBgn0050394.1;Parent=FBgn0050394.1.mrna1;Target=FBgn0050394.1 112 229 +
Chr2	stalkie_big_nohaplotig	CDS	19660822	19661227	100	+	1	ID=FBgn0050394.1.mrna1.cds3;Name=FBgn0050394.1;Parent=FBgn0050394.1.mrna1;Target=FBgn0050394.1 230 635 +
Chr2	stalkie_big_nohaplotig	CDS	19661297	19661445	100	+	2	ID=FBgn0050394.1.mrna1.cds4;Name=FBgn0050394.1;Parent=FBgn0050394.1.mrna1;Target=FBgn0050394.1 636 784 +
Chr2	stalkie_big_nohaplotig	CDS	19661501	19661637	100	+	1	ID=FBgn0050394.1.mrna1.cds5;Name=FBgn0050394.1;Parent=FBgn0050394.1.mrna1;Target=FBgn0050394.1 785 921 +
Chr2	stalkie_big_nohaplotig	CDS	19663446	19665386	99	+	0	ID=FBgn0050394.1.mrna1.cds6;Name=FBgn0050394.1;Parent=FBgn0050394.1.mrna1;Target=FBgn0050394.1 922 2862 +
ChrX	stalkie_big_nohaplotig	mRNA	21763291	21771286	.	-	.	ID=FBgn0021953.1.mrna1;Name=FBgn0021953.1;Parent=FBgn0021953.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=2010;mismatches=6;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	21771036	21771286	99	-	.	ID=FBgn0021953.1.mrna1.exon1;Name=FBgn0021953.1;Parent=FBgn0021953.1.mrna1;Target=FBgn0021953.1 1 251 +
ChrX	stalkie_big_nohaplotig	exon	21764570	21765190	99	-	.	ID=FBgn0021953.1.mrna1.exon2;Name=FBgn0021953.1;Parent=FBgn0021953.1.mrna1;Target=FBgn0021953.1 252 872 +
ChrX	stalkie_big_nohaplotig	exon	21764298	21764499	100	-	.	ID=FBgn0021953.1.mrna1.exon3;Name=FBgn0021953.1;Parent=FBgn0021953.1.mrna1;Target=FBgn0021953.1 873 1074 +
ChrX	stalkie_big_nohaplotig	exon	21763291	21764232	100	-	.	ID=FBgn0021953.1.mrna1.exon4;Name=FBgn0021953.1;Parent=FBgn0021953.1.mrna1;Target=FBgn0021953.1 1075 2016 +
ChrX	stalkie_big_nohaplotig	CDS	21771036	21771286	99	-	0	ID=FBgn0021953.1.mrna1.cds1;Name=FBgn0021953.1;Parent=FBgn0021953.1.mrna1;Target=FBgn0021953.1 1 251 +
ChrX	stalkie_big_nohaplotig	CDS	21764570	21765190	99	-	2	ID=FBgn0021953.1.mrna1.cds2;Name=FBgn0021953.1;Parent=FBgn0021953.1.mrna1;Target=FBgn0021953.1 252 872 +
ChrX	stalkie_big_nohaplotig	CDS	21764298	21764499	100	-	2	ID=FBgn0021953.1.mrna1.cds3;Name=FBgn0021953.1;Parent=FBgn0021953.1.mrna1;Target=FBgn0021953.1 873 1074 +
ChrX	stalkie_big_nohaplotig	CDS	21763291	21764232	100	-	0	ID=FBgn0021953.1.mrna1.cds4;Name=FBgn0021953.1;Parent=FBgn0021953.1.mrna1;Target=FBgn0021953.1 1075 2016 +
ChrX	stalkie_big_nohaplotig	mRNA	21678442	21689304	.	+	.	ID=FBgn0051739.1.mrna1;Name=FBgn0051739.1;Parent=FBgn0051739.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=3375;mismatches=19;indels=6;unknowns=2
ChrX	stalkie_big_nohaplotig	exon	21678442	21678681	99	+	.	ID=FBgn0051739.1.mrna1.exon1;Name=FBgn0051739.1;Parent=FBgn0051739.1.mrna1;Target=FBgn0051739.1 1 240 +
ChrX	stalkie_big_nohaplotig	exon	21678791	21678917	98	+	.	ID=FBgn0051739.1.mrna1.exon2;Name=FBgn0051739.1;Parent=FBgn0051739.1.mrna1;Target=FBgn0051739.1 241 367 +
ChrX	stalkie_big_nohaplotig	exon	21681565	21681797	98	+	.	ID=FBgn0051739.1.mrna1.exon3;Name=FBgn0051739.1;Parent=FBgn0051739.1.mrna1;Target=FBgn0051739.1 368 600 +
ChrX	stalkie_big_nohaplotig	exon	21681864	21682116	99	+	.	ID=FBgn0051739.1.mrna1.exon4;Name=FBgn0051739.1;Parent=FBgn0051739.1.mrna1;Target=FBgn0051739.1 601 853 +
ChrX	stalkie_big_nohaplotig	exon	21682177	21682355	99	+	.	ID=FBgn0051739.1.mrna1.exon5;Name=FBgn0051739.1;Parent=FBgn0051739.1.mrna1;Target=FBgn0051739.1 854 1032 +
ChrX	stalkie_big_nohaplotig	exon	21683163	21683252	98	+	.	ID=FBgn0051739.1.mrna1.exon6;Name=FBgn0051739.1;Parent=FBgn0051739.1.mrna1;Target=FBgn0051739.1 1033 1122 +
ChrX	stalkie_big_nohaplotig	exon	21683311	21683933	99	+	.	ID=FBgn0051739.1.mrna1.exon7;Name=FBgn0051739.1;Parent=FBgn0051739.1.mrna1;Target=FBgn0051739.1 1123 1745 +
ChrX	stalkie_big_nohaplotig	exon	21684013	21684496	100	+	.	ID=FBgn0051739.1.mrna1.exon8;Name=FBgn0051739.1;Parent=FBgn0051739.1.mrna1;Target=FBgn0051739.1 1746 2229 +
ChrX	stalkie_big_nohaplotig	exon	21684561	21684740	98	+	.	ID=FBgn0051739.1.mrna1.exon9;Name=FBgn0051739.1;Parent=FBgn0051739.1.mrna1;Target=FBgn0051739.1 2230 2409 +
ChrX	stalkie_big_nohaplotig	exon	21684802	21684930	100	+	.	ID=FBgn0051739.1.mrna1.exon10;Name=FBgn0051739.1;Parent=FBgn0051739.1.mrna1;Target=FBgn0051739.1 2410 2538 +
ChrX	stalkie_big_nohaplotig	exon	21688447	21689304	98	+	.	ID=FBgn0051739.1.mrna1.exon11;Name=FBgn0051739.1;Parent=FBgn0051739.1.mrna1;Target=FBgn0051739.1 2539 3402 +
ChrX	stalkie_big_nohaplotig	CDS	21678442	21678681	99	+	0	ID=FBgn0051739.1.mrna1.cds1;Name=FBgn0051739.1;Parent=FBgn0051739.1.mrna1;Target=FBgn0051739.1 1 240 +
ChrX	stalkie_big_nohaplotig	CDS	21678791	21678917	98	+	0	ID=FBgn0051739.1.mrna1.cds2;Name=FBgn0051739.1;Parent=FBgn0051739.1.mrna1;Target=FBgn0051739.1 241 367 +
ChrX	stalkie_big_nohaplotig	CDS	21681565	21681797	98	+	1	ID=FBgn0051739.1.mrna1.cds3;Name=FBgn0051739.1;Parent=FBgn0051739.1.mrna1;Target=FBgn0051739.1 368 600 +
ChrX	stalkie_big_nohaplotig	CDS	21681864	21682116	99	+	0	ID=FBgn0051739.1.mrna1.cds4;Name=FBgn0051739.1;Parent=FBgn0051739.1.mrna1;Target=FBgn0051739.1 601 853 +
ChrX	stalkie_big_nohaplotig	CDS	21682177	21682355	99	+	1	ID=FBgn0051739.1.mrna1.cds5;Name=FBgn0051739.1;Parent=FBgn0051739.1.mrna1;Target=FBgn0051739.1 854 1032 +
ChrX	stalkie_big_nohaplotig	CDS	21683163	21683252	98	+	0	ID=FBgn0051739.1.mrna1.cds6;Name=FBgn0051739.1;Parent=FBgn0051739.1.mrna1;Target=FBgn0051739.1 1033 1122 +
ChrX	stalkie_big_nohaplotig	CDS	21683311	21683933	99	+	0	ID=FBgn0051739.1.mrna1.cds7;Name=FBgn0051739.1;Parent=FBgn0051739.1.mrna1;Target=FBgn0051739.1 1123 1745 +
ChrX	stalkie_big_nohaplotig	CDS	21684013	21684496	100	+	2	ID=FBgn0051739.1.mrna1.cds8;Name=FBgn0051739.1;Parent=FBgn0051739.1.mrna1;Target=FBgn0051739.1 1746 2229 +
ChrX	stalkie_big_nohaplotig	CDS	21684561	21684740	98	+	0	ID=FBgn0051739.1.mrna1.cds9;Name=FBgn0051739.1;Parent=FBgn0051739.1.mrna1;Target=FBgn0051739.1 2230 2409 +
ChrX	stalkie_big_nohaplotig	CDS	21684802	21684930	100	+	0	ID=FBgn0051739.1.mrna1.cds10;Name=FBgn0051739.1;Parent=FBgn0051739.1.mrna1;Target=FBgn0051739.1 2410 2538 +
ChrX	stalkie_big_nohaplotig	CDS	21688447	21689304	98	+	0	ID=FBgn0051739.1.mrna1.cds11;Name=FBgn0051739.1;Parent=FBgn0051739.1.mrna1;Target=FBgn0051739.1 2539 3402 +
Chr1	stalkie_big_nohaplotig	mRNA	67882989	67900016	.	+	.	ID=FBgn0013263.1.mrna1;Name=FBgn0013263.1;Parent=FBgn0013263.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1598;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	67882989	67883240	100	+	.	ID=FBgn0013263.1.mrna1.exon1;Name=FBgn0013263.1;Parent=FBgn0013263.1.mrna1;Target=FBgn0013263.1 1 252 +
Chr1	stalkie_big_nohaplotig	exon	67888694	67888930	100	+	.	ID=FBgn0013263.1.mrna1.exon2;Name=FBgn0013263.1;Parent=FBgn0013263.1.mrna1;Target=FBgn0013263.1 253 489 +
Chr1	stalkie_big_nohaplotig	exon	67889000	67889216	100	+	.	ID=FBgn0013263.1.mrna1.exon3;Name=FBgn0013263.1;Parent=FBgn0013263.1.mrna1;Target=FBgn0013263.1 490 706 +
Chr1	stalkie_big_nohaplotig	exon	67889275	67889550	100	+	.	ID=FBgn0013263.1.mrna1.exon4;Name=FBgn0013263.1;Parent=FBgn0013263.1.mrna1;Target=FBgn0013263.1 707 982 +
Chr1	stalkie_big_nohaplotig	exon	67892727	67892864	100	+	.	ID=FBgn0013263.1.mrna1.exon5;Name=FBgn0013263.1;Parent=FBgn0013263.1.mrna1;Target=FBgn0013263.1 983 1120 +
Chr1	stalkie_big_nohaplotig	exon	67895842	67896260	99	+	.	ID=FBgn0013263.1.mrna1.exon6;Name=FBgn0013263.1;Parent=FBgn0013263.1.mrna1;Target=FBgn0013263.1 1121 1539 +
Chr1	stalkie_big_nohaplotig	exon	67899957	67900016	100	+	.	ID=FBgn0013263.1.mrna1.exon7;Name=FBgn0013263.1;Parent=FBgn0013263.1.mrna1;Target=FBgn0013263.1 1540 1599 +
Chr1	stalkie_big_nohaplotig	CDS	67882989	67883240	100	+	0	ID=FBgn0013263.1.mrna1.cds1;Name=FBgn0013263.1;Parent=FBgn0013263.1.mrna1;Target=FBgn0013263.1 1 252 +
Chr1	stalkie_big_nohaplotig	CDS	67888694	67888930	100	+	0	ID=FBgn0013263.1.mrna1.cds2;Name=FBgn0013263.1;Parent=FBgn0013263.1.mrna1;Target=FBgn0013263.1 253 489 +
Chr1	stalkie_big_nohaplotig	CDS	67889000	67889216	100	+	0	ID=FBgn0013263.1.mrna1.cds3;Name=FBgn0013263.1;Parent=FBgn0013263.1.mrna1;Target=FBgn0013263.1 490 706 +
Chr1	stalkie_big_nohaplotig	CDS	67889275	67889550	100	+	1	ID=FBgn0013263.1.mrna1.cds4;Name=FBgn0013263.1;Parent=FBgn0013263.1.mrna1;Target=FBgn0013263.1 707 982 +
Chr1	stalkie_big_nohaplotig	CDS	67892727	67892864	100	+	1	ID=FBgn0013263.1.mrna1.cds5;Name=FBgn0013263.1;Parent=FBgn0013263.1.mrna1;Target=FBgn0013263.1 983 1120 +
Chr1	stalkie_big_nohaplotig	CDS	67895842	67896260	99	+	1	ID=FBgn0013263.1.mrna1.cds6;Name=FBgn0013263.1;Parent=FBgn0013263.1.mrna1;Target=FBgn0013263.1 1121 1539 +
Chr1	stalkie_big_nohaplotig	CDS	67899957	67900016	100	+	0	ID=FBgn0013263.1.mrna1.cds7;Name=FBgn0013263.1;Parent=FBgn0013263.1.mrna1;Target=FBgn0013263.1 1540 1599 +
Chr1	stalkie_big_nohaplotig	mRNA	60165226	60168482	.	-	.	ID=FBgn0037024.2.mrna1;Name=FBgn0037024.2;Parent=FBgn0037024.2.path1;Dir=sensecoverage=100.0;identity=99.3;matches=1052;mismatches=7;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	60168162	60168482	100	-	.	ID=FBgn0037024.2.mrna1.exon1;Name=FBgn0037024.2;Parent=FBgn0037024.2.mrna1;Target=FBgn0037024.2 1 321 +
Chr1	stalkie_big_nohaplotig	exon	60165226	60165963	99	-	.	ID=FBgn0037024.2.mrna1.exon2;Name=FBgn0037024.2;Parent=FBgn0037024.2.mrna1;Target=FBgn0037024.2 322 1059 +
Chr1	stalkie_big_nohaplotig	CDS	60168162	60168482	100	-	0	ID=FBgn0037024.2.mrna1.cds1;Name=FBgn0037024.2;Parent=FBgn0037024.2.mrna1;Target=FBgn0037024.2 1 321 +
Chr1	stalkie_big_nohaplotig	CDS	60165226	60165963	99	-	0	ID=FBgn0037024.2.mrna1.cds2;Name=FBgn0037024.2;Parent=FBgn0037024.2.mrna1;Target=FBgn0037024.2 322 1059 +
ChrX	stalkie_big_nohaplotig	mRNA	45132988	45135045	.	-	.	ID=FBgn0031284.1.mrna1;Name=FBgn0031284.1;Parent=FBgn0031284.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=766;mismatches=0;indels=0;unknowns=14
ChrX	stalkie_big_nohaplotig	exon	45134400	45135045	100	-	.	ID=FBgn0031284.1.mrna1.exon1;Name=FBgn0031284.1;Parent=FBgn0031284.1.mrna1;Target=FBgn0031284.1 1 646 +
ChrX	stalkie_big_nohaplotig	exon	45132988	45133121	100	-	.	ID=FBgn0031284.1.mrna1.exon2;Name=FBgn0031284.1;Parent=FBgn0031284.1.mrna1;Target=FBgn0031284.1 647 780 +
ChrX	stalkie_big_nohaplotig	CDS	45134400	45135045	100	-	0	ID=FBgn0031284.1.mrna1.cds1;Name=FBgn0031284.1;Parent=FBgn0031284.1.mrna1;Target=FBgn0031284.1 1 646 +
ChrX	stalkie_big_nohaplotig	CDS	45132988	45133121	100	-	1	ID=FBgn0031284.1.mrna1.cds2;Name=FBgn0031284.1;Parent=FBgn0031284.1.mrna1;Target=FBgn0031284.1 647 780 +
ChrX	stalkie_big_nohaplotig	mRNA	45137185	45145798	.	+	.	ID=FBgn0031285.1.mrna1;Name=FBgn0031285.1;Parent=FBgn0031285.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=999;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	45137185	45137343	100	+	.	ID=FBgn0031285.1.mrna1.exon1;Name=FBgn0031285.1;Parent=FBgn0031285.1.mrna1;Target=FBgn0031285.1 1 159 +
ChrX	stalkie_big_nohaplotig	exon	45143268	45143973	100	+	.	ID=FBgn0031285.1.mrna1.exon2;Name=FBgn0031285.1;Parent=FBgn0031285.1.mrna1;Target=FBgn0031285.1 160 865 +
ChrX	stalkie_big_nohaplotig	exon	45145665	45145798	100	+	.	ID=FBgn0031285.1.mrna1.exon3;Name=FBgn0031285.1;Parent=FBgn0031285.1.mrna1;Target=FBgn0031285.1 866 999 +
ChrX	stalkie_big_nohaplotig	CDS	45137185	45137343	100	+	0	ID=FBgn0031285.1.mrna1.cds1;Name=FBgn0031285.1;Parent=FBgn0031285.1.mrna1;Target=FBgn0031285.1 1 159 +
ChrX	stalkie_big_nohaplotig	CDS	45143268	45143973	100	+	0	ID=FBgn0031285.1.mrna1.cds2;Name=FBgn0031285.1;Parent=FBgn0031285.1.mrna1;Target=FBgn0031285.1 160 865 +
ChrX	stalkie_big_nohaplotig	CDS	45145665	45145798	100	+	1	ID=FBgn0031285.1.mrna1.cds3;Name=FBgn0031285.1;Parent=FBgn0031285.1.mrna1;Target=FBgn0031285.1 866 999 +
Chr2	stalkie_big_nohaplotig	mRNA	145671157	145685648	.	+	.	ID=ORF3014.mrna1;Name=ORF3014;Parent=ORF3014.path1;Dir=sensecoverage=100.0;identity=98.3;matches=767;mismatches=13;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	145671157	145671304	97	+	.	ID=ORF3014.mrna1.exon1;Name=ORF3014;Parent=ORF3014.mrna1;Target=ORF3014 1 148 +
Chr2	stalkie_big_nohaplotig	exon	145685017	145685648	98	+	.	ID=ORF3014.mrna1.exon2;Name=ORF3014;Parent=ORF3014.mrna1;Target=ORF3014 149 780 +
Chr2	stalkie_big_nohaplotig	CDS	145671157	145671304	97	+	0	ID=ORF3014.mrna1.cds1;Name=ORF3014;Parent=ORF3014.mrna1;Target=ORF3014 1 148 +
Chr2	stalkie_big_nohaplotig	CDS	145685017	145685648	98	+	1	ID=ORF3014.mrna1.cds2;Name=ORF3014;Parent=ORF3014.mrna1;Target=ORF3014 149 780 +
ChrX	stalkie_big_nohaplotig	mRNA	74513350	74536371	.	-	.	ID=FBgn0032116.1.mrna1;Name=FBgn0032116.1;Parent=FBgn0032116.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3222;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	74536053	74536371	100	-	.	ID=FBgn0032116.1.mrna1.exon1;Name=FBgn0032116.1;Parent=FBgn0032116.1.mrna1;Target=FBgn0032116.1 1 319 +
ChrX	stalkie_big_nohaplotig	exon	74517277	74517446	100	-	.	ID=FBgn0032116.1.mrna1.exon2;Name=FBgn0032116.1;Parent=FBgn0032116.1.mrna1;Target=FBgn0032116.1 320 489 +
ChrX	stalkie_big_nohaplotig	exon	74514592	74516898	100	-	.	ID=FBgn0032116.1.mrna1.exon3;Name=FBgn0032116.1;Parent=FBgn0032116.1.mrna1;Target=FBgn0032116.1 490 2796 +
ChrX	stalkie_big_nohaplotig	exon	74513350	74513775	100	-	.	ID=FBgn0032116.1.mrna1.exon4;Name=FBgn0032116.1;Parent=FBgn0032116.1.mrna1;Target=FBgn0032116.1 2797 3222 +
ChrX	stalkie_big_nohaplotig	CDS	74536053	74536371	100	-	0	ID=FBgn0032116.1.mrna1.cds1;Name=FBgn0032116.1;Parent=FBgn0032116.1.mrna1;Target=FBgn0032116.1 1 319 +
ChrX	stalkie_big_nohaplotig	CDS	74517277	74517446	100	-	1	ID=FBgn0032116.1.mrna1.cds2;Name=FBgn0032116.1;Parent=FBgn0032116.1.mrna1;Target=FBgn0032116.1 320 489 +
ChrX	stalkie_big_nohaplotig	CDS	74514592	74516898	100	-	0	ID=FBgn0032116.1.mrna1.cds3;Name=FBgn0032116.1;Parent=FBgn0032116.1.mrna1;Target=FBgn0032116.1 490 2796 +
ChrX	stalkie_big_nohaplotig	CDS	74513350	74513775	100	-	0	ID=FBgn0032116.1.mrna1.cds4;Name=FBgn0032116.1;Parent=FBgn0032116.1.mrna1;Target=FBgn0032116.1 2797 3222 +
Chr1	stalkie_big_nohaplotig	mRNA	161982499	161984235	.	-	.	ID=FBgn0001186.2.mrna1;Name=FBgn0001186.2;Parent=FBgn0001186.2.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1736;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	161982499	161984235	99	-	.	ID=FBgn0001186.2.mrna1.exon1;Name=FBgn0001186.2;Parent=FBgn0001186.2.mrna1;Target=FBgn0001186.2 1737 1 .
Chr1	stalkie_big_nohaplotig	CDS	161982499	161984235	99	-	0	ID=FBgn0001186.2.mrna1.cds1;Name=FBgn0001186.2;Parent=FBgn0001186.2.mrna1;Target=FBgn0001186.2 1737 1 .
Chr2	stalkie_big_nohaplotig	mRNA	25724744	25724914	.	+	.	ID=FBgn0263395.1.mrna1;Name=FBgn0263395.1;Parent=FBgn0263395.1.path1;Dir=indeterminatecoverage=6.4;identity=100.0;matches=171;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	25724744	25724914	100	+	.	ID=FBgn0263395.1.mrna1.exon1;Name=FBgn0263395.1;Parent=FBgn0263395.1.mrna1;Target=FBgn0263395.1 171 1 .
Chr2	stalkie_big_nohaplotig	CDS	25724744	25724914	100	+	0	ID=FBgn0263395.1.mrna1.cds1;Name=FBgn0263395.1;Parent=FBgn0263395.1.mrna1;Target=FBgn0263395.1 171 1 .
Chr2	stalkie_big_nohaplotig	mRNA	10546412	10547347	.	-	.	ID=ORF2307.mrna1;Name=ORF2307;Parent=ORF2307.path1;Dir=sensecoverage=100.0;identity=99.3;matches=872;mismatches=3;indels=3;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	10546500	10547347	99	-	.	ID=ORF2307.mrna1.exon1;Name=ORF2307;Parent=ORF2307.mrna1;Target=ORF2307 1 851 +
Chr2	stalkie_big_nohaplotig	exon	10546412	10546438	100	-	.	ID=ORF2307.mrna1.exon2;Name=ORF2307;Parent=ORF2307.mrna1;Target=ORF2307 853 879 +
Chr2	stalkie_big_nohaplotig	CDS	10546500	10547347	99	-	0	ID=ORF2307.mrna1.cds1;Name=ORF2307;Parent=ORF2307.mrna1;Target=ORF2307 1 851 +
Chr2	stalkie_big_nohaplotig	CDS	10546412	10546438	100	-	0	ID=ORF2307.mrna1.cds2;Name=ORF2307;Parent=ORF2307.mrna1;Target=ORF2307 853 879 +
Chr2	stalkie_big_nohaplotig	mRNA	25823766	25824705	.	+	.	ID=ORF2307.mrna2;Name=ORF2307;Parent=ORF2307.path2;Dir=sensecoverage=100.0;identity=99.3;matches=873;mismatches=6;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	25823766	25824616	99	+	.	ID=ORF2307.mrna2.exon1;Name=ORF2307;Parent=ORF2307.mrna2;Target=ORF2307 1 851 +
Chr2	stalkie_big_nohaplotig	exon	25824678	25824705	100	+	.	ID=ORF2307.mrna2.exon2;Name=ORF2307;Parent=ORF2307.mrna2;Target=ORF2307 852 879 +
Chr2	stalkie_big_nohaplotig	CDS	25823766	25824616	99	+	0	ID=ORF2307.mrna2.cds1;Name=ORF2307;Parent=ORF2307.mrna2;Target=ORF2307 1 851 +
Chr2	stalkie_big_nohaplotig	CDS	25824678	25824705	100	+	2	ID=ORF2307.mrna2.cds2;Name=ORF2307;Parent=ORF2307.mrna2;Target=ORF2307 852 879 +
Chr2	stalkie_big_nohaplotig	mRNA	23166588	23170590	.	+	.	ID=FBgn0033958.1.mrna1;Name=FBgn0033958.1;Parent=FBgn0033958.1.path1;Dir=sensecoverage=99.2;identity=99.7;matches=1952;mismatches=6;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	23166588	23166756	100	+	.	ID=FBgn0033958.1.mrna1.exon1;Name=FBgn0033958.1;Parent=FBgn0033958.1.mrna1;Target=FBgn0033958.1 17 185 +
Chr2	stalkie_big_nohaplotig	exon	23166812	23167087	100	+	.	ID=FBgn0033958.1.mrna1.exon2;Name=FBgn0033958.1;Parent=FBgn0033958.1.mrna1;Target=FBgn0033958.1 186 461 +
Chr2	stalkie_big_nohaplotig	exon	23168897	23169032	100	+	.	ID=FBgn0033958.1.mrna1.exon3;Name=FBgn0033958.1;Parent=FBgn0033958.1.mrna1;Target=FBgn0033958.1 462 597 +
Chr2	stalkie_big_nohaplotig	exon	23169099	23170286	99	+	.	ID=FBgn0033958.1.mrna1.exon4;Name=FBgn0033958.1;Parent=FBgn0033958.1.mrna1;Target=FBgn0033958.1 598 1785 +
Chr2	stalkie_big_nohaplotig	exon	23170402	23170590	99	+	.	ID=FBgn0033958.1.mrna1.exon5;Name=FBgn0033958.1;Parent=FBgn0033958.1.mrna1;Target=FBgn0033958.1 1786 1974 +
Chr2	stalkie_big_nohaplotig	CDS	23166590	23166756	100	+	0	ID=FBgn0033958.1.mrna1.cds1;Name=FBgn0033958.1;Parent=FBgn0033958.1.mrna1;Target=FBgn0033958.1 19 185 +
Chr2	stalkie_big_nohaplotig	CDS	23166812	23167087	100	+	2	ID=FBgn0033958.1.mrna1.cds2;Name=FBgn0033958.1;Parent=FBgn0033958.1.mrna1;Target=FBgn0033958.1 186 461 +
Chr2	stalkie_big_nohaplotig	CDS	23168897	23169032	100	+	2	ID=FBgn0033958.1.mrna1.cds3;Name=FBgn0033958.1;Parent=FBgn0033958.1.mrna1;Target=FBgn0033958.1 462 597 +
Chr2	stalkie_big_nohaplotig	CDS	23169099	23170286	99	+	0	ID=FBgn0033958.1.mrna1.cds4;Name=FBgn0033958.1;Parent=FBgn0033958.1.mrna1;Target=FBgn0033958.1 598 1785 +
Chr2	stalkie_big_nohaplotig	CDS	23170402	23170590	99	+	0	ID=FBgn0033958.1.mrna1.cds5;Name=FBgn0033958.1;Parent=FBgn0033958.1.mrna1;Target=FBgn0033958.1 1786 1974 +
Chr1	stalkie_big_nohaplotig	mRNA	3301150	3308563	.	+	.	ID=FBgn0045759.1.mrna1;Name=FBgn0045759.1;Parent=FBgn0045759.1.path1;Dir=sensecoverage=100.0;identity=99.2;matches=1563;mismatches=12;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	3301150	3301835	99	+	.	ID=FBgn0045759.1.mrna1.exon1;Name=FBgn0045759.1;Parent=FBgn0045759.1.mrna1;Target=FBgn0045759.1 1 686 +
Chr1	stalkie_big_nohaplotig	exon	3305404	3305677	98	+	.	ID=FBgn0045759.1.mrna1.exon2;Name=FBgn0045759.1;Parent=FBgn0045759.1.mrna1;Target=FBgn0045759.1 687 960 +
Chr1	stalkie_big_nohaplotig	exon	3307459	3307855	99	+	.	ID=FBgn0045759.1.mrna1.exon3;Name=FBgn0045759.1;Parent=FBgn0045759.1.mrna1;Target=FBgn0045759.1 961 1357 +
Chr1	stalkie_big_nohaplotig	exon	3308346	3308563	99	+	.	ID=FBgn0045759.1.mrna1.exon4;Name=FBgn0045759.1;Parent=FBgn0045759.1.mrna1;Target=FBgn0045759.1 1358 1575 +
Chr1	stalkie_big_nohaplotig	CDS	3301150	3301835	99	+	0	ID=FBgn0045759.1.mrna1.cds1;Name=FBgn0045759.1;Parent=FBgn0045759.1.mrna1;Target=FBgn0045759.1 1 686 +
Chr1	stalkie_big_nohaplotig	CDS	3305404	3305677	98	+	2	ID=FBgn0045759.1.mrna1.cds2;Name=FBgn0045759.1;Parent=FBgn0045759.1.mrna1;Target=FBgn0045759.1 687 960 +
Chr1	stalkie_big_nohaplotig	CDS	3307459	3307855	99	+	0	ID=FBgn0045759.1.mrna1.cds3;Name=FBgn0045759.1;Parent=FBgn0045759.1.mrna1;Target=FBgn0045759.1 961 1357 +
Chr1	stalkie_big_nohaplotig	CDS	3308346	3308563	99	+	1	ID=FBgn0045759.1.mrna1.cds4;Name=FBgn0045759.1;Parent=FBgn0045759.1.mrna1;Target=FBgn0045759.1 1358 1575 +
Chr2	stalkie_big_nohaplotig	mRNA	5117055	5118279	.	-	.	ID=ORF1309.mrna1;Name=ORF1309;Parent=ORF1309.path1;Dir=sensecoverage=100.0;identity=96.4;matches=1105;mismatches=10;indels=31;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	5118101	5118279	99	-	.	ID=ORF1309.mrna1.exon1;Name=ORF1309;Parent=ORF1309.mrna1;Target=ORF1309 1 180 +
Chr2	stalkie_big_nohaplotig	exon	5117978	5118043	98	-	.	ID=ORF1309.mrna1.exon2;Name=ORF1309;Parent=ORF1309.mrna1;Target=ORF1309 181 246 +
Chr2	stalkie_big_nohaplotig	exon	5117055	5117924	95	-	.	ID=ORF1309.mrna1.exon3;Name=ORF1309;Parent=ORF1309.mrna1;Target=ORF1309 247 1146 +
Chr2	stalkie_big_nohaplotig	CDS	5118243	5118277	97	-	0	ID=ORF1309.mrna1.cds1;Name=ORF1309;Parent=ORF1309.mrna1;Target=ORF1309 3 38 +
Chr2	stalkie_big_nohaplotig	mRNA	5017511	5038101	.	+	.	ID=FBgn0260964.1.mrna1;Name=FBgn0260964.1;Parent=FBgn0260964.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1917;mismatches=6;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	5017511	5018087	99	+	.	ID=FBgn0260964.1.mrna1.exon1;Name=FBgn0260964.1;Parent=FBgn0260964.1.mrna1;Target=FBgn0260964.1 1 577 +
Chr2	stalkie_big_nohaplotig	exon	5034181	5034351	100	+	.	ID=FBgn0260964.1.mrna1.exon2;Name=FBgn0260964.1;Parent=FBgn0260964.1.mrna1;Target=FBgn0260964.1 578 748 +
Chr2	stalkie_big_nohaplotig	exon	5034437	5034575	100	+	.	ID=FBgn0260964.1.mrna1.exon3;Name=FBgn0260964.1;Parent=FBgn0260964.1.mrna1;Target=FBgn0260964.1 749 887 +
Chr2	stalkie_big_nohaplotig	exon	5035015	5035073	100	+	.	ID=FBgn0260964.1.mrna1.exon4;Name=FBgn0260964.1;Parent=FBgn0260964.1.mrna1;Target=FBgn0260964.1 888 946 +
Chr2	stalkie_big_nohaplotig	exon	5035148	5035516	99	+	.	ID=FBgn0260964.1.mrna1.exon5;Name=FBgn0260964.1;Parent=FBgn0260964.1.mrna1;Target=FBgn0260964.1 947 1315 +
Chr2	stalkie_big_nohaplotig	exon	5035812	5036038	99	+	.	ID=FBgn0260964.1.mrna1.exon6;Name=FBgn0260964.1;Parent=FBgn0260964.1.mrna1;Target=FBgn0260964.1 1316 1542 +
Chr2	stalkie_big_nohaplotig	exon	5036099	5036416	99	+	.	ID=FBgn0260964.1.mrna1.exon7;Name=FBgn0260964.1;Parent=FBgn0260964.1.mrna1;Target=FBgn0260964.1 1543 1860 +
Chr2	stalkie_big_nohaplotig	exon	5038039	5038101	100	+	.	ID=FBgn0260964.1.mrna1.exon8;Name=FBgn0260964.1;Parent=FBgn0260964.1.mrna1;Target=FBgn0260964.1 1861 1923 +
Chr2	stalkie_big_nohaplotig	CDS	5017511	5018087	99	+	0	ID=FBgn0260964.1.mrna1.cds1;Name=FBgn0260964.1;Parent=FBgn0260964.1.mrna1;Target=FBgn0260964.1 1 577 +
Chr2	stalkie_big_nohaplotig	CDS	5034181	5034351	100	+	1	ID=FBgn0260964.1.mrna1.cds2;Name=FBgn0260964.1;Parent=FBgn0260964.1.mrna1;Target=FBgn0260964.1 578 748 +
Chr2	stalkie_big_nohaplotig	CDS	5034437	5034575	100	+	1	ID=FBgn0260964.1.mrna1.cds3;Name=FBgn0260964.1;Parent=FBgn0260964.1.mrna1;Target=FBgn0260964.1 749 887 +
Chr2	stalkie_big_nohaplotig	CDS	5035015	5035073	100	+	2	ID=FBgn0260964.1.mrna1.cds4;Name=FBgn0260964.1;Parent=FBgn0260964.1.mrna1;Target=FBgn0260964.1 888 946 +
Chr2	stalkie_big_nohaplotig	CDS	5035148	5035516	99	+	1	ID=FBgn0260964.1.mrna1.cds5;Name=FBgn0260964.1;Parent=FBgn0260964.1.mrna1;Target=FBgn0260964.1 947 1315 +
Chr2	stalkie_big_nohaplotig	CDS	5035812	5036038	99	+	1	ID=FBgn0260964.1.mrna1.cds6;Name=FBgn0260964.1;Parent=FBgn0260964.1.mrna1;Target=FBgn0260964.1 1316 1542 +
Chr2	stalkie_big_nohaplotig	CDS	5036099	5036416	99	+	0	ID=FBgn0260964.1.mrna1.cds7;Name=FBgn0260964.1;Parent=FBgn0260964.1.mrna1;Target=FBgn0260964.1 1543 1860 +
Chr2	stalkie_big_nohaplotig	CDS	5038039	5038101	100	+	0	ID=FBgn0260964.1.mrna1.cds8;Name=FBgn0260964.1;Parent=FBgn0260964.1.mrna1;Target=FBgn0260964.1 1861 1923 +
Chr1	stalkie_big_nohaplotig	mRNA	149434411	149435709	.	-	.	ID=FBgn0030694.1.mrna1;Name=FBgn0030694.1;Parent=FBgn0030694.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1067;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	149435650	149435709	100	-	.	ID=FBgn0030694.1.mrna1.exon1;Name=FBgn0030694.1;Parent=FBgn0030694.1.mrna1;Target=FBgn0030694.1 1 60 +
Chr1	stalkie_big_nohaplotig	exon	149435307	149435554	99	-	.	ID=FBgn0030694.1.mrna1.exon2;Name=FBgn0030694.1;Parent=FBgn0030694.1.mrna1;Target=FBgn0030694.1 61 308 +
Chr1	stalkie_big_nohaplotig	exon	149434756	149435239	99	-	.	ID=FBgn0030694.1.mrna1.exon3;Name=FBgn0030694.1;Parent=FBgn0030694.1.mrna1;Target=FBgn0030694.1 309 792 +
Chr1	stalkie_big_nohaplotig	exon	149434411	149434689	100	-	.	ID=FBgn0030694.1.mrna1.exon4;Name=FBgn0030694.1;Parent=FBgn0030694.1.mrna1;Target=FBgn0030694.1 793 1071 +
Chr1	stalkie_big_nohaplotig	CDS	149435650	149435709	100	-	0	ID=FBgn0030694.1.mrna1.cds1;Name=FBgn0030694.1;Parent=FBgn0030694.1.mrna1;Target=FBgn0030694.1 1 60 +
Chr1	stalkie_big_nohaplotig	CDS	149435307	149435554	99	-	0	ID=FBgn0030694.1.mrna1.cds2;Name=FBgn0030694.1;Parent=FBgn0030694.1.mrna1;Target=FBgn0030694.1 61 308 +
Chr1	stalkie_big_nohaplotig	CDS	149434756	149435239	99	-	2	ID=FBgn0030694.1.mrna1.cds3;Name=FBgn0030694.1;Parent=FBgn0030694.1.mrna1;Target=FBgn0030694.1 309 792 +
Chr1	stalkie_big_nohaplotig	CDS	149434411	149434689	100	-	0	ID=FBgn0030694.1.mrna1.cds4;Name=FBgn0030694.1;Parent=FBgn0030694.1.mrna1;Target=FBgn0030694.1 793 1071 +
Chr1	stalkie_big_nohaplotig	mRNA	149361874	149381943	.	-	.	ID=FBgn0085430.1.mrna2;Name=FBgn0085430.1;Parent=FBgn0085430.1.path2;Dir=sensecoverage=73.9;identity=99.7;matches=3145;mismatches=8;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	149364448	149367046	99	-	.	ID=FBgn0085430.1.mrna2.exon2;Name=FBgn0085430.1;Parent=FBgn0085430.1.mrna2;Target=FBgn0085430.1 1118 3716 +
Chr1	stalkie_big_nohaplotig	exon	149364045	149364383	99	-	.	ID=FBgn0085430.1.mrna2.exon3;Name=FBgn0085430.1;Parent=FBgn0085430.1.mrna2;Target=FBgn0085430.1 3717 4055 +
Chr1	stalkie_big_nohaplotig	exon	149363833	149363982	100	-	.	ID=FBgn0085430.1.mrna2.exon4;Name=FBgn0085430.1;Parent=FBgn0085430.1.mrna2;Target=FBgn0085430.1 4056 4205 +
Chr1	stalkie_big_nohaplotig	exon	149361874	149361937	100	-	.	ID=FBgn0085430.1.mrna2.exon5;Name=FBgn0085430.1;Parent=FBgn0085430.1.mrna2;Target=FBgn0085430.1 4206 4269 +
Chr1	stalkie_big_nohaplotig	CDS	149364448	149367046	99	-	1	ID=FBgn0085430.1.mrna2.cds2;Name=FBgn0085430.1;Parent=FBgn0085430.1.mrna2;Target=FBgn0085430.1 1118 3716 +
Chr1	stalkie_big_nohaplotig	CDS	149364045	149364383	99	-	2	ID=FBgn0085430.1.mrna2.cds3;Name=FBgn0085430.1;Parent=FBgn0085430.1.mrna2;Target=FBgn0085430.1 3717 4055 +
Chr1	stalkie_big_nohaplotig	CDS	149363833	149363982	100	-	2	ID=FBgn0085430.1.mrna2.cds4;Name=FBgn0085430.1;Parent=FBgn0085430.1.mrna2;Target=FBgn0085430.1 4056 4205 +
Chr1	stalkie_big_nohaplotig	CDS	149361874	149361937	100	-	2	ID=FBgn0085430.1.mrna2.cds5;Name=FBgn0085430.1;Parent=FBgn0085430.1.mrna2;Target=FBgn0085430.1 4206 4269 +
Chr1	stalkie_big_nohaplotig	mRNA	134429544	134435390	.	+	.	ID=FBgn0030685.1.mrna1;Name=FBgn0030685.1;Parent=FBgn0030685.1.path1;Dir=sensecoverage=96.1;identity=99.6;matches=2546;mismatches=10;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	134429544	134429759	100	+	.	ID=FBgn0030685.1.mrna1.exon1;Name=FBgn0030685.1;Parent=FBgn0030685.1.mrna1;Target=FBgn0030685.1 106 321 +
Chr1	stalkie_big_nohaplotig	exon	134429823	134429894	100	+	.	ID=FBgn0030685.1.mrna1.exon2;Name=FBgn0030685.1;Parent=FBgn0030685.1.mrna1;Target=FBgn0030685.1 322 393 +
Chr1	stalkie_big_nohaplotig	exon	134429970	134430021	100	+	.	ID=FBgn0030685.1.mrna1.exon3;Name=FBgn0030685.1;Parent=FBgn0030685.1.mrna1;Target=FBgn0030685.1 394 445 +
Chr1	stalkie_big_nohaplotig	exon	134432207	134432520	100	+	.	ID=FBgn0030685.1.mrna1.exon4;Name=FBgn0030685.1;Parent=FBgn0030685.1.mrna1;Target=FBgn0030685.1 446 759 +
Chr1	stalkie_big_nohaplotig	exon	134432588	134432918	99	+	.	ID=FBgn0030685.1.mrna1.exon5;Name=FBgn0030685.1;Parent=FBgn0030685.1.mrna1;Target=FBgn0030685.1 760 1090 +
Chr1	stalkie_big_nohaplotig	exon	134433000	134433105	100	+	.	ID=FBgn0030685.1.mrna1.exon6;Name=FBgn0030685.1;Parent=FBgn0030685.1.mrna1;Target=FBgn0030685.1 1091 1196 +
Chr1	stalkie_big_nohaplotig	exon	134433165	134434451	99	+	.	ID=FBgn0030685.1.mrna1.exon7;Name=FBgn0030685.1;Parent=FBgn0030685.1.mrna1;Target=FBgn0030685.1 1197 2483 +
Chr1	stalkie_big_nohaplotig	exon	134434523	134434602	100	+	.	ID=FBgn0030685.1.mrna1.exon8;Name=FBgn0030685.1;Parent=FBgn0030685.1.mrna1;Target=FBgn0030685.1 2484 2563 +
Chr1	stalkie_big_nohaplotig	exon	134435293	134435390	100	+	.	ID=FBgn0030685.1.mrna1.exon9;Name=FBgn0030685.1;Parent=FBgn0030685.1.mrna1;Target=FBgn0030685.1 2564 2661 +
Chr1	stalkie_big_nohaplotig	CDS	134429544	134429759	100	+	0	ID=FBgn0030685.1.mrna1.cds1;Name=FBgn0030685.1;Parent=FBgn0030685.1.mrna1;Target=FBgn0030685.1 106 321 +
Chr1	stalkie_big_nohaplotig	CDS	134429823	134429894	100	+	0	ID=FBgn0030685.1.mrna1.cds2;Name=FBgn0030685.1;Parent=FBgn0030685.1.mrna1;Target=FBgn0030685.1 322 393 +
Chr1	stalkie_big_nohaplotig	CDS	134429970	134430021	100	+	0	ID=FBgn0030685.1.mrna1.cds3;Name=FBgn0030685.1;Parent=FBgn0030685.1.mrna1;Target=FBgn0030685.1 394 445 +
Chr1	stalkie_big_nohaplotig	CDS	134432207	134432520	100	+	1	ID=FBgn0030685.1.mrna1.cds4;Name=FBgn0030685.1;Parent=FBgn0030685.1.mrna1;Target=FBgn0030685.1 446 759 +
Chr1	stalkie_big_nohaplotig	CDS	134432588	134432918	99	+	0	ID=FBgn0030685.1.mrna1.cds5;Name=FBgn0030685.1;Parent=FBgn0030685.1.mrna1;Target=FBgn0030685.1 760 1090 +
Chr1	stalkie_big_nohaplotig	CDS	134433000	134433105	100	+	1	ID=FBgn0030685.1.mrna1.cds6;Name=FBgn0030685.1;Parent=FBgn0030685.1.mrna1;Target=FBgn0030685.1 1091 1196 +
Chr1	stalkie_big_nohaplotig	CDS	134433165	134434451	99	+	2	ID=FBgn0030685.1.mrna1.cds7;Name=FBgn0030685.1;Parent=FBgn0030685.1.mrna1;Target=FBgn0030685.1 1197 2483 +
Chr1	stalkie_big_nohaplotig	CDS	134434523	134434602	100	+	2	ID=FBgn0030685.1.mrna1.cds8;Name=FBgn0030685.1;Parent=FBgn0030685.1.mrna1;Target=FBgn0030685.1 2484 2563 +
Chr1	stalkie_big_nohaplotig	CDS	134435293	134435390	100	+	1	ID=FBgn0030685.1.mrna1.cds9;Name=FBgn0030685.1;Parent=FBgn0030685.1.mrna1;Target=FBgn0030685.1 2564 2661 +
Chr1	stalkie_big_nohaplotig	mRNA	120612894	120613775	.	+	.	ID=ORF2294.mrna1;Name=ORF2294;Parent=ORF2294.path1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=878;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	120612894	120613775	99	+	.	ID=ORF2294.mrna1.exon1;Name=ORF2294;Parent=ORF2294.mrna1;Target=ORF2294 882 1 .
Chr1	stalkie_big_nohaplotig	CDS	120612894	120613775	99	+	0	ID=ORF2294.mrna1.cds1;Name=ORF2294;Parent=ORF2294.mrna1;Target=ORF2294 882 1 .
Chr1	stalkie_big_nohaplotig	mRNA	122277957	122282433	.	+	.	ID=FBgn0001330.1.mrna1;Name=FBgn0001330.1;Parent=FBgn0001330.1.path1;Dir=sensecoverage=99.9;identity=99.4;matches=2956;mismatches=17;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	122277957	122278811	100	+	.	ID=FBgn0001330.1.mrna1.exon1;Name=FBgn0001330.1;Parent=FBgn0001330.1.mrna1;Target=FBgn0001330.1 4 858 +
Chr1	stalkie_big_nohaplotig	exon	122278868	122280023	98	+	.	ID=FBgn0001330.1.mrna1.exon2;Name=FBgn0001330.1;Parent=FBgn0001330.1.mrna1;Target=FBgn0001330.1 859 2014 +
Chr1	stalkie_big_nohaplotig	exon	122281323	122282004	100	+	.	ID=FBgn0001330.1.mrna1.exon3;Name=FBgn0001330.1;Parent=FBgn0001330.1.mrna1;Target=FBgn0001330.1 2015 2696 +
Chr1	stalkie_big_nohaplotig	exon	122282069	122282271	99	+	.	ID=FBgn0001330.1.mrna1.exon4;Name=FBgn0001330.1;Parent=FBgn0001330.1.mrna1;Target=FBgn0001330.1 2697 2899 +
Chr1	stalkie_big_nohaplotig	exon	122282357	122282433	100	+	.	ID=FBgn0001330.1.mrna1.exon5;Name=FBgn0001330.1;Parent=FBgn0001330.1.mrna1;Target=FBgn0001330.1 2900 2976 +
Chr1	stalkie_big_nohaplotig	CDS	122277957	122278811	100	+	0	ID=FBgn0001330.1.mrna1.cds1;Name=FBgn0001330.1;Parent=FBgn0001330.1.mrna1;Target=FBgn0001330.1 4 858 +
Chr1	stalkie_big_nohaplotig	CDS	122278868	122280023	98	+	0	ID=FBgn0001330.1.mrna1.cds2;Name=FBgn0001330.1;Parent=FBgn0001330.1.mrna1;Target=FBgn0001330.1 859 2014 +
Chr1	stalkie_big_nohaplotig	CDS	122281323	122282004	100	+	1	ID=FBgn0001330.1.mrna1.cds3;Name=FBgn0001330.1;Parent=FBgn0001330.1.mrna1;Target=FBgn0001330.1 2015 2696 +
Chr1	stalkie_big_nohaplotig	CDS	122282069	122282271	99	+	2	ID=FBgn0001330.1.mrna1.cds4;Name=FBgn0001330.1;Parent=FBgn0001330.1.mrna1;Target=FBgn0001330.1 2697 2899 +
Chr1	stalkie_big_nohaplotig	CDS	122282357	122282433	100	+	1	ID=FBgn0001330.1.mrna1.cds5;Name=FBgn0001330.1;Parent=FBgn0001330.1.mrna1;Target=FBgn0001330.1 2900 2976 +
Chr2	stalkie_big_nohaplotig	mRNA	113115579	113119061	.	-	.	ID=FBgn0032130.1.mrna1;Name=FBgn0032130.1;Parent=FBgn0032130.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=990;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	113118875	113119061	100	-	.	ID=FBgn0032130.1.mrna1.exon1;Name=FBgn0032130.1;Parent=FBgn0032130.1.mrna1;Target=FBgn0032130.1 1 187 +
Chr2	stalkie_big_nohaplotig	exon	113115579	113116381	100	-	.	ID=FBgn0032130.1.mrna1.exon2;Name=FBgn0032130.1;Parent=FBgn0032130.1.mrna1;Target=FBgn0032130.1 188 990 +
Chr2	stalkie_big_nohaplotig	CDS	113118875	113119061	100	-	0	ID=FBgn0032130.1.mrna1.cds1;Name=FBgn0032130.1;Parent=FBgn0032130.1.mrna1;Target=FBgn0032130.1 1 187 +
Chr2	stalkie_big_nohaplotig	CDS	113115579	113116381	100	-	1	ID=FBgn0032130.1.mrna1.cds2;Name=FBgn0032130.1;Parent=FBgn0032130.1.mrna1;Target=FBgn0032130.1 188 990 +
Chr1	stalkie_big_nohaplotig	mRNA	163219620	163228950	.	-	.	ID=FBgn0261803.1.mrna1;Name=FBgn0261803.1;Parent=FBgn0261803.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=1004;mismatches=7;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	163228918	163228950	100	-	.	ID=FBgn0261803.1.mrna1.exon1;Name=FBgn0261803.1;Parent=FBgn0261803.1.mrna1;Target=FBgn0261803.1 1 33 +
Chr1	stalkie_big_nohaplotig	exon	163228568	163228846	98	-	.	ID=FBgn0261803.1.mrna1.exon2;Name=FBgn0261803.1;Parent=FBgn0261803.1.mrna1;Target=FBgn0261803.1 34 312 +
Chr1	stalkie_big_nohaplotig	exon	163226767	163227082	99	-	.	ID=FBgn0261803.1.mrna1.exon3;Name=FBgn0261803.1;Parent=FBgn0261803.1.mrna1;Target=FBgn0261803.1 313 628 +
Chr1	stalkie_big_nohaplotig	exon	163226604	163226706	99	-	.	ID=FBgn0261803.1.mrna1.exon4;Name=FBgn0261803.1;Parent=FBgn0261803.1.mrna1;Target=FBgn0261803.1 629 731 +
Chr1	stalkie_big_nohaplotig	exon	163226484	163226531	100	-	.	ID=FBgn0261803.1.mrna1.exon5;Name=FBgn0261803.1;Parent=FBgn0261803.1.mrna1;Target=FBgn0261803.1 732 779 +
Chr1	stalkie_big_nohaplotig	exon	163219812	163219928	100	-	.	ID=FBgn0261803.1.mrna1.exon6;Name=FBgn0261803.1;Parent=FBgn0261803.1.mrna1;Target=FBgn0261803.1 780 896 +
Chr1	stalkie_big_nohaplotig	exon	163219620	163219734	100	-	.	ID=FBgn0261803.1.mrna1.exon7;Name=FBgn0261803.1;Parent=FBgn0261803.1.mrna1;Target=FBgn0261803.1 897 1011 +
Chr1	stalkie_big_nohaplotig	CDS	163228918	163228950	100	-	0	ID=FBgn0261803.1.mrna1.cds1;Name=FBgn0261803.1;Parent=FBgn0261803.1.mrna1;Target=FBgn0261803.1 1 33 +
Chr1	stalkie_big_nohaplotig	CDS	163228568	163228846	98	-	0	ID=FBgn0261803.1.mrna1.cds2;Name=FBgn0261803.1;Parent=FBgn0261803.1.mrna1;Target=FBgn0261803.1 34 312 +
Chr1	stalkie_big_nohaplotig	CDS	163226767	163227082	99	-	0	ID=FBgn0261803.1.mrna1.cds3;Name=FBgn0261803.1;Parent=FBgn0261803.1.mrna1;Target=FBgn0261803.1 313 628 +
Chr1	stalkie_big_nohaplotig	CDS	163226604	163226706	99	-	1	ID=FBgn0261803.1.mrna1.cds4;Name=FBgn0261803.1;Parent=FBgn0261803.1.mrna1;Target=FBgn0261803.1 629 731 +
Chr1	stalkie_big_nohaplotig	CDS	163226484	163226531	100	-	2	ID=FBgn0261803.1.mrna1.cds5;Name=FBgn0261803.1;Parent=FBgn0261803.1.mrna1;Target=FBgn0261803.1 732 779 +
Chr1	stalkie_big_nohaplotig	CDS	163219812	163219928	100	-	2	ID=FBgn0261803.1.mrna1.cds6;Name=FBgn0261803.1;Parent=FBgn0261803.1.mrna1;Target=FBgn0261803.1 780 896 +
Chr1	stalkie_big_nohaplotig	CDS	163219620	163219734	100	-	2	ID=FBgn0261803.1.mrna1.cds7;Name=FBgn0261803.1;Parent=FBgn0261803.1.mrna1;Target=FBgn0261803.1 897 1011 +
ChrX	stalkie_big_nohaplotig	mRNA	29218895	29277567	.	+	.	ID=FBgn0003716.1.mrna1;Name=FBgn0003716.1;Parent=FBgn0003716.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1569;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	29218895	29218976	100	+	.	ID=FBgn0003716.1.mrna1.exon1;Name=FBgn0003716.1;Parent=FBgn0003716.1.mrna1;Target=FBgn0003716.1 1 82 +
ChrX	stalkie_big_nohaplotig	exon	29275998	29276185	100	+	.	ID=FBgn0003716.1.mrna1.exon2;Name=FBgn0003716.1;Parent=FBgn0003716.1.mrna1;Target=FBgn0003716.1 83 270 +
ChrX	stalkie_big_nohaplotig	exon	29276269	29277567	100	+	.	ID=FBgn0003716.1.mrna1.exon3;Name=FBgn0003716.1;Parent=FBgn0003716.1.mrna1;Target=FBgn0003716.1 271 1569 +
ChrX	stalkie_big_nohaplotig	CDS	29218895	29218976	100	+	0	ID=FBgn0003716.1.mrna1.cds1;Name=FBgn0003716.1;Parent=FBgn0003716.1.mrna1;Target=FBgn0003716.1 1 82 +
ChrX	stalkie_big_nohaplotig	CDS	29275998	29276185	100	+	1	ID=FBgn0003716.1.mrna1.cds2;Name=FBgn0003716.1;Parent=FBgn0003716.1.mrna1;Target=FBgn0003716.1 83 270 +
ChrX	stalkie_big_nohaplotig	CDS	29276269	29277567	100	+	0	ID=FBgn0003716.1.mrna1.cds3;Name=FBgn0003716.1;Parent=FBgn0003716.1.mrna1;Target=FBgn0003716.1 271 1569 +
ChrX	stalkie_big_nohaplotig	mRNA	4031302	4033148	.	-	.	ID=ORF1171.mrna1;Name=ORF1171;Parent=ORF1171.path1;Dir=sensecoverage=100.0;identity=98.9;matches=1187;mismatches=4;indels=9;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	4033020	4033148	99	-	.	ID=ORF1171.mrna1.exon1;Name=ORF1171;Parent=ORF1171.mrna1;Target=ORF1171 1 129 +
ChrX	stalkie_big_nohaplotig	exon	4032842	4032889	100	-	.	ID=ORF1171.mrna1.exon2;Name=ORF1171;Parent=ORF1171.mrna1;Target=ORF1171 130 177 +
ChrX	stalkie_big_nohaplotig	exon	4031302	4032315	98	-	.	ID=ORF1171.mrna1.exon3;Name=ORF1171;Parent=ORF1171.mrna1;Target=ORF1171 178 1200 +
ChrX	stalkie_big_nohaplotig	CDS	4033020	4033148	99	-	0	ID=ORF1171.mrna1.cds1;Name=ORF1171;Parent=ORF1171.mrna1;Target=ORF1171 1 129 +
ChrX	stalkie_big_nohaplotig	CDS	4032842	4032889	100	-	0	ID=ORF1171.mrna1.cds2;Name=ORF1171;Parent=ORF1171.mrna1;Target=ORF1171 130 177 +
ChrX	stalkie_big_nohaplotig	CDS	4031302	4032315	98	-	0	ID=ORF1171.mrna1.cds3;Name=ORF1171;Parent=ORF1171.mrna1;Target=ORF1171 178 1200 +
ChrX	stalkie_big_nohaplotig	mRNA	4072786	4110229	.	-	.	ID=FBgn0243486.1.mrna1;Name=FBgn0243486.1;Parent=FBgn0243486.1.path1;Dir=sensecoverage=98.1;identity=99.7;matches=2298;mismatches=6;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	4110100	4110229	100	-	.	ID=FBgn0243486.1.mrna1.exon1;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 46 175 +
ChrX	stalkie_big_nohaplotig	exon	4104687	4104884	100	-	.	ID=FBgn0243486.1.mrna1.exon2;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 176 373 +
ChrX	stalkie_big_nohaplotig	exon	4098232	4098359	100	-	.	ID=FBgn0243486.1.mrna1.exon3;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 374 501 +
ChrX	stalkie_big_nohaplotig	exon	4096716	4096859	99	-	.	ID=FBgn0243486.1.mrna1.exon4;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 502 645 +
ChrX	stalkie_big_nohaplotig	exon	4096400	4096504	100	-	.	ID=FBgn0243486.1.mrna1.exon5;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 646 750 +
ChrX	stalkie_big_nohaplotig	exon	4094647	4094773	100	-	.	ID=FBgn0243486.1.mrna1.exon6;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 751 877 +
ChrX	stalkie_big_nohaplotig	exon	4094268	4094464	100	-	.	ID=FBgn0243486.1.mrna1.exon7;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 878 1074 +
ChrX	stalkie_big_nohaplotig	exon	4092467	4092622	100	-	.	ID=FBgn0243486.1.mrna1.exon8;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 1075 1230 +
ChrX	stalkie_big_nohaplotig	exon	4087990	4088136	100	-	.	ID=FBgn0243486.1.mrna1.exon9;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 1231 1377 +
ChrX	stalkie_big_nohaplotig	exon	4086385	4086547	100	-	.	ID=FBgn0243486.1.mrna1.exon10;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 1378 1540 +
ChrX	stalkie_big_nohaplotig	exon	4085538	4085669	100	-	.	ID=FBgn0243486.1.mrna1.exon11;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 1541 1672 +
ChrX	stalkie_big_nohaplotig	exon	4072786	4073462	99	-	.	ID=FBgn0243486.1.mrna1.exon12;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 1673 2349 +
ChrX	stalkie_big_nohaplotig	CDS	4110100	4110229	100	-	0	ID=FBgn0243486.1.mrna1.cds1;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 46 175 +
ChrX	stalkie_big_nohaplotig	CDS	4104687	4104884	100	-	1	ID=FBgn0243486.1.mrna1.cds2;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 176 373 +
ChrX	stalkie_big_nohaplotig	CDS	4098232	4098359	100	-	1	ID=FBgn0243486.1.mrna1.cds3;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 374 501 +
ChrX	stalkie_big_nohaplotig	CDS	4096716	4096859	99	-	0	ID=FBgn0243486.1.mrna1.cds4;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 502 645 +
ChrX	stalkie_big_nohaplotig	CDS	4096400	4096504	100	-	0	ID=FBgn0243486.1.mrna1.cds5;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 646 750 +
ChrX	stalkie_big_nohaplotig	CDS	4094647	4094773	100	-	0	ID=FBgn0243486.1.mrna1.cds6;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 751 877 +
ChrX	stalkie_big_nohaplotig	CDS	4094268	4094464	100	-	1	ID=FBgn0243486.1.mrna1.cds7;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 878 1074 +
ChrX	stalkie_big_nohaplotig	CDS	4092467	4092622	100	-	0	ID=FBgn0243486.1.mrna1.cds8;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 1075 1230 +
ChrX	stalkie_big_nohaplotig	CDS	4087990	4088136	100	-	0	ID=FBgn0243486.1.mrna1.cds9;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 1231 1377 +
ChrX	stalkie_big_nohaplotig	CDS	4086385	4086547	100	-	0	ID=FBgn0243486.1.mrna1.cds10;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 1378 1540 +
ChrX	stalkie_big_nohaplotig	CDS	4085538	4085669	100	-	1	ID=FBgn0243486.1.mrna1.cds11;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 1541 1672 +
ChrX	stalkie_big_nohaplotig	CDS	4072786	4073462	99	-	1	ID=FBgn0243486.1.mrna1.cds12;Name=FBgn0243486.1;Parent=FBgn0243486.1.mrna1;Target=FBgn0243486.1 1673 2349 +
Chr2	stalkie_big_nohaplotig	mRNA	14610085	14617411	.	+	.	ID=FBgn0016131.1.mrna1;Name=FBgn0016131.1;Parent=FBgn0016131.1.path1;Dir=sensecoverage=90.3;identity=99.8;matches=846;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	14610085	14610250	100	+	.	ID=FBgn0016131.1.mrna1.exon1;Name=FBgn0016131.1;Parent=FBgn0016131.1.mrna1;Target=FBgn0016131.1 92 257 +
Chr2	stalkie_big_nohaplotig	exon	14616516	14616651	99	+	.	ID=FBgn0016131.1.mrna1.exon2;Name=FBgn0016131.1;Parent=FBgn0016131.1.mrna1;Target=FBgn0016131.1 258 393 +
Chr2	stalkie_big_nohaplotig	exon	14616719	14617047	100	+	.	ID=FBgn0016131.1.mrna1.exon3;Name=FBgn0016131.1;Parent=FBgn0016131.1.mrna1;Target=FBgn0016131.1 394 722 +
Chr2	stalkie_big_nohaplotig	exon	14617117	14617252	99	+	.	ID=FBgn0016131.1.mrna1.exon4;Name=FBgn0016131.1;Parent=FBgn0016131.1.mrna1;Target=FBgn0016131.1 723 858 +
Chr2	stalkie_big_nohaplotig	exon	14617331	14617411	100	+	.	ID=FBgn0016131.1.mrna1.exon5;Name=FBgn0016131.1;Parent=FBgn0016131.1.mrna1;Target=FBgn0016131.1 859 939 +
Chr2	stalkie_big_nohaplotig	CDS	14610087	14610250	100	+	0	ID=FBgn0016131.1.mrna1.cds1;Name=FBgn0016131.1;Parent=FBgn0016131.1.mrna1;Target=FBgn0016131.1 94 257 +
Chr2	stalkie_big_nohaplotig	CDS	14616516	14616651	99	+	2	ID=FBgn0016131.1.mrna1.cds2;Name=FBgn0016131.1;Parent=FBgn0016131.1.mrna1;Target=FBgn0016131.1 258 393 +
Chr2	stalkie_big_nohaplotig	CDS	14616719	14617047	100	+	0	ID=FBgn0016131.1.mrna1.cds3;Name=FBgn0016131.1;Parent=FBgn0016131.1.mrna1;Target=FBgn0016131.1 394 722 +
Chr2	stalkie_big_nohaplotig	CDS	14617117	14617252	99	+	2	ID=FBgn0016131.1.mrna1.cds4;Name=FBgn0016131.1;Parent=FBgn0016131.1.mrna1;Target=FBgn0016131.1 723 858 +
Chr2	stalkie_big_nohaplotig	CDS	14617331	14617411	100	+	0	ID=FBgn0016131.1.mrna1.cds5;Name=FBgn0016131.1;Parent=FBgn0016131.1.mrna1;Target=FBgn0016131.1 859 939 +
Chr2	stalkie_big_nohaplotig	mRNA	14811983	14813561	.	+	.	ID=FBgn0262560.1.mrna1;Name=FBgn0262560.1;Parent=FBgn0262560.1.path1;Dir=sensecoverage=100.0;identity=99.1;matches=1507;mismatches=14;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	14811983	14812774	99	+	.	ID=FBgn0262560.1.mrna1.exon1;Name=FBgn0262560.1;Parent=FBgn0262560.1.mrna1;Target=FBgn0262560.1 1 792 +
Chr2	stalkie_big_nohaplotig	exon	14812833	14813561	98	+	.	ID=FBgn0262560.1.mrna1.exon2;Name=FBgn0262560.1;Parent=FBgn0262560.1.mrna1;Target=FBgn0262560.1 793 1521 +
Chr2	stalkie_big_nohaplotig	CDS	14811983	14812774	99	+	0	ID=FBgn0262560.1.mrna1.cds1;Name=FBgn0262560.1;Parent=FBgn0262560.1.mrna1;Target=FBgn0262560.1 1 792 +
Chr2	stalkie_big_nohaplotig	CDS	14812833	14813561	98	+	0	ID=FBgn0262560.1.mrna1.cds2;Name=FBgn0262560.1;Parent=FBgn0262560.1.mrna1;Target=FBgn0262560.1 793 1521 +
Chr2	stalkie_big_nohaplotig	mRNA	39662267	39664575	.	-	.	ID=FBgn0033667.1.mrna1;Name=FBgn0033667.1;Parent=FBgn0033667.1.path1;Dir=sensecoverage=99.9;identity=99.7;matches=1338;mismatches=4;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	39664405	39664575	100	-	.	ID=FBgn0033667.1.mrna1.exon1;Name=FBgn0033667.1;Parent=FBgn0033667.1.mrna1;Target=FBgn0033667.1 1 171 +
Chr2	stalkie_big_nohaplotig	exon	39664176	39664333	99	-	.	ID=FBgn0033667.1.mrna1.exon2;Name=FBgn0033667.1;Parent=FBgn0033667.1.mrna1;Target=FBgn0033667.1 172 329 +
Chr2	stalkie_big_nohaplotig	exon	39663180	39663417	99	-	.	ID=FBgn0033667.1.mrna1.exon3;Name=FBgn0033667.1;Parent=FBgn0033667.1.mrna1;Target=FBgn0033667.1 330 567 +
Chr2	stalkie_big_nohaplotig	exon	39662709	39663110	99	-	.	ID=FBgn0033667.1.mrna1.exon4;Name=FBgn0033667.1;Parent=FBgn0033667.1.mrna1;Target=FBgn0033667.1 568 969 +
Chr2	stalkie_big_nohaplotig	exon	39662267	39662639	100	-	.	ID=FBgn0033667.1.mrna1.exon5;Name=FBgn0033667.1;Parent=FBgn0033667.1.mrna1;Target=FBgn0033667.1 970 1342 +
Chr2	stalkie_big_nohaplotig	CDS	39664405	39664575	100	-	0	ID=FBgn0033667.1.mrna1.cds1;Name=FBgn0033667.1;Parent=FBgn0033667.1.mrna1;Target=FBgn0033667.1 1 171 +
Chr2	stalkie_big_nohaplotig	CDS	39664176	39664333	99	-	0	ID=FBgn0033667.1.mrna1.cds2;Name=FBgn0033667.1;Parent=FBgn0033667.1.mrna1;Target=FBgn0033667.1 172 329 +
Chr2	stalkie_big_nohaplotig	CDS	39663180	39663417	99	-	2	ID=FBgn0033667.1.mrna1.cds3;Name=FBgn0033667.1;Parent=FBgn0033667.1.mrna1;Target=FBgn0033667.1 330 567 +
Chr2	stalkie_big_nohaplotig	CDS	39662709	39663110	99	-	0	ID=FBgn0033667.1.mrna1.cds4;Name=FBgn0033667.1;Parent=FBgn0033667.1.mrna1;Target=FBgn0033667.1 568 969 +
Chr2	stalkie_big_nohaplotig	CDS	39662268	39662639	100	-	0	ID=FBgn0033667.1.mrna1.cds5;Name=FBgn0033667.1;Parent=FBgn0033667.1.mrna1;Target=FBgn0033667.1 970 1341 +
Chr1	stalkie_big_nohaplotig	mRNA	152100132	152105927	.	+	.	ID=FBgn0083956.1.mrna2;Name=FBgn0083956.1;Parent=FBgn0083956.1.path2;Dir=sensecoverage=97.7;identity=99.3;matches=4583;mismatches=31;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	152100132	152100580	100	+	.	ID=FBgn0083956.1.mrna2.exon1;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 112 560 +
Chr1	stalkie_big_nohaplotig	exon	152100641	152100761	100	+	.	ID=FBgn0083956.1.mrna2.exon2;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 561 681 +
Chr1	stalkie_big_nohaplotig	exon	152100820	152101010	100	+	.	ID=FBgn0083956.1.mrna2.exon3;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 682 872 +
Chr1	stalkie_big_nohaplotig	exon	152101077	152101411	98	+	.	ID=FBgn0083956.1.mrna2.exon4;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 873 1207 +
Chr1	stalkie_big_nohaplotig	exon	152101470	152101653	100	+	.	ID=FBgn0083956.1.mrna2.exon5;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 1208 1391 +
Chr1	stalkie_big_nohaplotig	exon	152101741	152102039	99	+	.	ID=FBgn0083956.1.mrna2.exon6;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 1392 1690 +
Chr1	stalkie_big_nohaplotig	exon	152102103	152102275	97	+	.	ID=FBgn0083956.1.mrna2.exon7;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 1691 1863 +
Chr1	stalkie_big_nohaplotig	exon	152102333	152103300	99	+	.	ID=FBgn0083956.1.mrna2.exon8;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 1864 2831 +
Chr1	stalkie_big_nohaplotig	exon	152103361	152103541	99	+	.	ID=FBgn0083956.1.mrna2.exon9;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 2832 3012 +
Chr1	stalkie_big_nohaplotig	exon	152103600	152103712	100	+	.	ID=FBgn0083956.1.mrna2.exon10;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 3013 3125 +
Chr1	stalkie_big_nohaplotig	exon	152103813	152104524	99	+	.	ID=FBgn0083956.1.mrna2.exon11;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 3126 3837 +
Chr1	stalkie_big_nohaplotig	exon	152104597	152104704	99	+	.	ID=FBgn0083956.1.mrna2.exon12;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 3838 3945 +
Chr1	stalkie_big_nohaplotig	exon	152104910	152105305	98	+	.	ID=FBgn0083956.1.mrna2.exon13;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 3946 4341 +
Chr1	stalkie_big_nohaplotig	exon	152105448	152105555	100	+	.	ID=FBgn0083956.1.mrna2.exon14;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 4342 4449 +
Chr1	stalkie_big_nohaplotig	exon	152105652	152105927	98	+	.	ID=FBgn0083956.1.mrna2.exon15;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 4450 4725 +
Chr1	stalkie_big_nohaplotig	CDS	152100132	152100580	100	+	0	ID=FBgn0083956.1.mrna2.cds1;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 112 560 +
Chr1	stalkie_big_nohaplotig	CDS	152100641	152100761	100	+	2	ID=FBgn0083956.1.mrna2.cds2;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 561 681 +
Chr1	stalkie_big_nohaplotig	CDS	152100820	152101010	100	+	0	ID=FBgn0083956.1.mrna2.cds3;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 682 872 +
Chr1	stalkie_big_nohaplotig	CDS	152101077	152101411	98	+	2	ID=FBgn0083956.1.mrna2.cds4;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 873 1207 +
Chr1	stalkie_big_nohaplotig	CDS	152101470	152101653	100	+	1	ID=FBgn0083956.1.mrna2.cds5;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 1208 1391 +
Chr1	stalkie_big_nohaplotig	CDS	152101741	152102039	99	+	2	ID=FBgn0083956.1.mrna2.cds6;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 1392 1690 +
Chr1	stalkie_big_nohaplotig	CDS	152102103	152102275	97	+	1	ID=FBgn0083956.1.mrna2.cds7;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 1691 1863 +
Chr1	stalkie_big_nohaplotig	CDS	152102333	152103300	99	+	0	ID=FBgn0083956.1.mrna2.cds8;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 1864 2831 +
Chr1	stalkie_big_nohaplotig	CDS	152103361	152103541	99	+	2	ID=FBgn0083956.1.mrna2.cds9;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 2832 3012 +
Chr1	stalkie_big_nohaplotig	CDS	152103600	152103712	100	+	0	ID=FBgn0083956.1.mrna2.cds10;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 3013 3125 +
Chr1	stalkie_big_nohaplotig	CDS	152103813	152104524	99	+	2	ID=FBgn0083956.1.mrna2.cds11;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 3126 3837 +
Chr1	stalkie_big_nohaplotig	CDS	152104597	152104704	99	+	0	ID=FBgn0083956.1.mrna2.cds12;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 3838 3945 +
Chr1	stalkie_big_nohaplotig	CDS	152104910	152105305	98	+	0	ID=FBgn0083956.1.mrna2.cds13;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 3946 4341 +
Chr1	stalkie_big_nohaplotig	CDS	152105448	152105555	100	+	0	ID=FBgn0083956.1.mrna2.cds14;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 4342 4449 +
Chr1	stalkie_big_nohaplotig	CDS	152105652	152105927	98	+	0	ID=FBgn0083956.1.mrna2.cds15;Name=FBgn0083956.1;Parent=FBgn0083956.1.mrna2;Target=FBgn0083956.1 4450 4725 +
Chr2	stalkie_big_nohaplotig	mRNA	64710032	64716244	.	+	.	ID=AAEL011588.1.mrna1;Name=AAEL011588.1;Parent=AAEL011588.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=510;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	64710032	64710116	100	+	.	ID=AAEL011588.1.mrna1.exon1;Name=AAEL011588.1;Parent=AAEL011588.1.mrna1;Target=AAEL011588.1 1 85 +
Chr2	stalkie_big_nohaplotig	exon	64715454	64715587	100	+	.	ID=AAEL011588.1.mrna1.exon2;Name=AAEL011588.1;Parent=AAEL011588.1.mrna1;Target=AAEL011588.1 86 219 +
Chr2	stalkie_big_nohaplotig	exon	64715899	64715952	100	+	.	ID=AAEL011588.1.mrna1.exon3;Name=AAEL011588.1;Parent=AAEL011588.1.mrna1;Target=AAEL011588.1 220 273 +
Chr2	stalkie_big_nohaplotig	exon	64716008	64716244	100	+	.	ID=AAEL011588.1.mrna1.exon4;Name=AAEL011588.1;Parent=AAEL011588.1.mrna1;Target=AAEL011588.1 274 510 +
Chr2	stalkie_big_nohaplotig	CDS	64710032	64710116	100	+	0	ID=AAEL011588.1.mrna1.cds1;Name=AAEL011588.1;Parent=AAEL011588.1.mrna1;Target=AAEL011588.1 1 85 +
Chr2	stalkie_big_nohaplotig	CDS	64715454	64715587	100	+	1	ID=AAEL011588.1.mrna1.cds2;Name=AAEL011588.1;Parent=AAEL011588.1.mrna1;Target=AAEL011588.1 86 219 +
Chr2	stalkie_big_nohaplotig	CDS	64715899	64715952	100	+	0	ID=AAEL011588.1.mrna1.cds3;Name=AAEL011588.1;Parent=AAEL011588.1.mrna1;Target=AAEL011588.1 220 273 +
Chr2	stalkie_big_nohaplotig	CDS	64716008	64716244	100	+	0	ID=AAEL011588.1.mrna1.cds4;Name=AAEL011588.1;Parent=AAEL011588.1.mrna1;Target=AAEL011588.1 274 510 +
Chr1	stalkie_big_nohaplotig	mRNA	111283977	111284978	.	-	.	ID=ORF1806.mrna1;Name=ORF1806;Parent=ORF1806.path1;Dir=indeterminatecoverage=100.0;identity=96.4;matches=977;mismatches=4;indels=33;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	111283977	111284978	96	-	.	ID=ORF1806.mrna1.exon1;Name=ORF1806;Parent=ORF1806.mrna1;Target=ORF1806 993 1 .
Chr1	stalkie_big_nohaplotig	CDS	111283977	111284978	96	-	0	ID=ORF1806.mrna1.cds1;Name=ORF1806;Parent=ORF1806.mrna1;Target=ORF1806 993 1 .
ChrX	stalkie_big_nohaplotig	mRNA	40765183	40767390	.	+	.	ID=FBgn0028965.1.mrna1;Name=FBgn0028965.1;Parent=FBgn0028965.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1435;mismatches=2;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	40765183	40766439	99	+	.	ID=FBgn0028965.1.mrna1.exon1;Name=FBgn0028965.1;Parent=FBgn0028965.1.mrna1;Target=FBgn0028965.1 1 1257 +
ChrX	stalkie_big_nohaplotig	exon	40767143	40767271	100	+	.	ID=FBgn0028965.1.mrna1.exon2;Name=FBgn0028965.1;Parent=FBgn0028965.1.mrna1;Target=FBgn0028965.1 1258 1386 +
ChrX	stalkie_big_nohaplotig	exon	40767340	40767390	100	+	.	ID=FBgn0028965.1.mrna1.exon3;Name=FBgn0028965.1;Parent=FBgn0028965.1.mrna1;Target=FBgn0028965.1 1387 1437 +
ChrX	stalkie_big_nohaplotig	CDS	40765183	40766439	99	+	0	ID=FBgn0028965.1.mrna1.cds1;Name=FBgn0028965.1;Parent=FBgn0028965.1.mrna1;Target=FBgn0028965.1 1 1257 +
ChrX	stalkie_big_nohaplotig	CDS	40767143	40767271	100	+	0	ID=FBgn0028965.1.mrna1.cds2;Name=FBgn0028965.1;Parent=FBgn0028965.1.mrna1;Target=FBgn0028965.1 1258 1386 +
ChrX	stalkie_big_nohaplotig	CDS	40767340	40767390	100	+	0	ID=FBgn0028965.1.mrna1.cds3;Name=FBgn0028965.1;Parent=FBgn0028965.1.mrna1;Target=FBgn0028965.1 1387 1437 +
ChrX	stalkie_big_nohaplotig	mRNA	40566904	40567379	.	+	.	ID=FBgn0032600.mrna1;Name=FBgn0032600;Parent=FBgn0032600.path1;Dir=sensecoverage=95.8;identity=99.3;matches=297;mismatches=2;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	40566904	40566950	100	+	.	ID=FBgn0032600.mrna1.exon1;Name=FBgn0032600;Parent=FBgn0032600.mrna1;Target=FBgn0032600 1 47 +
ChrX	stalkie_big_nohaplotig	exon	40567128	40567379	99	+	.	ID=FBgn0032600.mrna1.exon2;Name=FBgn0032600;Parent=FBgn0032600.mrna1;Target=FBgn0032600 48 299 +
ChrX	stalkie_big_nohaplotig	CDS	40566904	40566950	100	+	0	ID=FBgn0032600.mrna1.cds1;Name=FBgn0032600;Parent=FBgn0032600.mrna1;Target=FBgn0032600 1 47 +
ChrX	stalkie_big_nohaplotig	CDS	40567128	40567377	99	+	2	ID=FBgn0032600.mrna1.cds2;Name=FBgn0032600;Parent=FBgn0032600.mrna1;Target=FBgn0032600 48 297 +
Chr1	stalkie_big_nohaplotig	mRNA	111874743	111875416	.	+	.	ID=FBgn0031043.1.mrna1;Name=FBgn0031043.1;Parent=FBgn0031043.1.path1;Dir=sensecoverage=100.0;identity=99.0;matches=481;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	111874743	111874900	98	+	.	ID=FBgn0031043.1.mrna1.exon1;Name=FBgn0031043.1;Parent=FBgn0031043.1.mrna1;Target=FBgn0031043.1 1 158 +
Chr1	stalkie_big_nohaplotig	exon	111874952	111875067	100	+	.	ID=FBgn0031043.1.mrna1.exon2;Name=FBgn0031043.1;Parent=FBgn0031043.1.mrna1;Target=FBgn0031043.1 159 274 +
Chr1	stalkie_big_nohaplotig	exon	111875150	111875279	97	+	.	ID=FBgn0031043.1.mrna1.exon3;Name=FBgn0031043.1;Parent=FBgn0031043.1.mrna1;Target=FBgn0031043.1 275 404 +
Chr1	stalkie_big_nohaplotig	exon	111875335	111875416	100	+	.	ID=FBgn0031043.1.mrna1.exon4;Name=FBgn0031043.1;Parent=FBgn0031043.1.mrna1;Target=FBgn0031043.1 405 486 +
Chr1	stalkie_big_nohaplotig	CDS	111874848	111874900	100	+	0	ID=FBgn0031043.1.mrna1.cds1;Name=FBgn0031043.1;Parent=FBgn0031043.1.mrna1;Target=FBgn0031043.1 106 158 +
Chr1	stalkie_big_nohaplotig	CDS	111874952	111875067	100	+	2	ID=FBgn0031043.1.mrna1.cds2;Name=FBgn0031043.1;Parent=FBgn0031043.1.mrna1;Target=FBgn0031043.1 159 274 +
Chr1	stalkie_big_nohaplotig	CDS	111875150	111875279	97	+	1	ID=FBgn0031043.1.mrna1.cds3;Name=FBgn0031043.1;Parent=FBgn0031043.1.mrna1;Target=FBgn0031043.1 275 404 +
Chr1	stalkie_big_nohaplotig	CDS	111875335	111875416	100	+	2	ID=FBgn0031043.1.mrna1.cds4;Name=FBgn0031043.1;Parent=FBgn0031043.1.mrna1;Target=FBgn0031043.1 405 486 +
ChrX	stalkie_big_nohaplotig	mRNA	41490188	41490969	.	+	.	ID=FBgn0028847.1.mrna1;Name=FBgn0028847.1;Parent=FBgn0028847.1.path1;Dir=indeterminatecoverage=99.9;identity=99.6;matches=779;mismatches=3;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	41490188	41490969	99	+	.	ID=FBgn0028847.1.mrna1.exon1;Name=FBgn0028847.1;Parent=FBgn0028847.1.mrna1;Target=FBgn0028847.1 782 1 .
ChrX	stalkie_big_nohaplotig	CDS	41490188	41490967	99	+	0	ID=FBgn0028847.1.mrna1.cds1;Name=FBgn0028847.1;Parent=FBgn0028847.1.mrna1;Target=FBgn0028847.1 780 1 .
Chr2	stalkie_big_nohaplotig	mRNA	121397857	121445339	.	-	.	ID=FBgn0086901.1.mrna1;Name=FBgn0086901.1;Parent=FBgn0086901.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=4539;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	121444792	121445339	100	-	.	ID=FBgn0086901.1.mrna1.exon1;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 1 548 +
Chr2	stalkie_big_nohaplotig	exon	121442329	121443376	100	-	.	ID=FBgn0086901.1.mrna1.exon2;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 549 1596 +
Chr2	stalkie_big_nohaplotig	exon	121442171	121442213	100	-	.	ID=FBgn0086901.1.mrna1.exon3;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 1597 1639 +
Chr2	stalkie_big_nohaplotig	exon	121413503	121413574	100	-	.	ID=FBgn0086901.1.mrna1.exon4;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 1640 1711 +
Chr2	stalkie_big_nohaplotig	exon	121401091	121401242	100	-	.	ID=FBgn0086901.1.mrna1.exon5;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 1712 1863 +
Chr2	stalkie_big_nohaplotig	exon	121400046	121400930	100	-	.	ID=FBgn0086901.1.mrna1.exon6;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 1864 2748 +
Chr2	stalkie_big_nohaplotig	exon	121399834	121399979	100	-	.	ID=FBgn0086901.1.mrna1.exon7;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 2749 2894 +
Chr2	stalkie_big_nohaplotig	exon	121399175	121399770	100	-	.	ID=FBgn0086901.1.mrna1.exon8;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 2895 3490 +
Chr2	stalkie_big_nohaplotig	exon	121398630	121399113	100	-	.	ID=FBgn0086901.1.mrna1.exon9;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 3491 3974 +
Chr2	stalkie_big_nohaplotig	exon	121398298	121398570	100	-	.	ID=FBgn0086901.1.mrna1.exon10;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 3975 4247 +
Chr2	stalkie_big_nohaplotig	exon	121398040	121398219	100	-	.	ID=FBgn0086901.1.mrna1.exon11;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 4248 4427 +
Chr2	stalkie_big_nohaplotig	exon	121397857	121397968	100	-	.	ID=FBgn0086901.1.mrna1.exon12;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 4428 4539 +
Chr2	stalkie_big_nohaplotig	CDS	121444792	121445339	100	-	0	ID=FBgn0086901.1.mrna1.cds1;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 1 548 +
Chr2	stalkie_big_nohaplotig	CDS	121442329	121443376	100	-	2	ID=FBgn0086901.1.mrna1.cds2;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 549 1596 +
Chr2	stalkie_big_nohaplotig	CDS	121442171	121442213	100	-	0	ID=FBgn0086901.1.mrna1.cds3;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 1597 1639 +
Chr2	stalkie_big_nohaplotig	CDS	121413503	121413574	100	-	1	ID=FBgn0086901.1.mrna1.cds4;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 1640 1711 +
Chr2	stalkie_big_nohaplotig	CDS	121401091	121401242	100	-	1	ID=FBgn0086901.1.mrna1.cds5;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 1712 1863 +
Chr2	stalkie_big_nohaplotig	CDS	121400046	121400930	100	-	0	ID=FBgn0086901.1.mrna1.cds6;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 1864 2748 +
Chr2	stalkie_big_nohaplotig	CDS	121399834	121399979	100	-	0	ID=FBgn0086901.1.mrna1.cds7;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 2749 2894 +
Chr2	stalkie_big_nohaplotig	CDS	121399175	121399770	100	-	2	ID=FBgn0086901.1.mrna1.cds8;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 2895 3490 +
Chr2	stalkie_big_nohaplotig	CDS	121398630	121399113	100	-	1	ID=FBgn0086901.1.mrna1.cds9;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 3491 3974 +
Chr2	stalkie_big_nohaplotig	CDS	121398298	121398570	100	-	2	ID=FBgn0086901.1.mrna1.cds10;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 3975 4247 +
Chr2	stalkie_big_nohaplotig	CDS	121398040	121398219	100	-	2	ID=FBgn0086901.1.mrna1.cds11;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 4248 4427 +
Chr2	stalkie_big_nohaplotig	CDS	121397857	121397968	100	-	2	ID=FBgn0086901.1.mrna1.cds12;Name=FBgn0086901.1;Parent=FBgn0086901.1.mrna1;Target=FBgn0086901.1 4428 4539 +
Chr2	stalkie_big_nohaplotig	mRNA	107390716	107404359	.	-	.	ID=FBgn0037606.1.mrna1;Name=FBgn0037606.1;Parent=FBgn0037606.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1734;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	107404129	107404359	99	-	.	ID=FBgn0037606.1.mrna1.exon1;Name=FBgn0037606.1;Parent=FBgn0037606.1.mrna1;Target=FBgn0037606.1 1 231 +
Chr2	stalkie_big_nohaplotig	exon	107392986	107393391	100	-	.	ID=FBgn0037606.1.mrna1.exon2;Name=FBgn0037606.1;Parent=FBgn0037606.1.mrna1;Target=FBgn0037606.1 232 637 +
Chr2	stalkie_big_nohaplotig	exon	107392126	107392924	99	-	.	ID=FBgn0037606.1.mrna1.exon3;Name=FBgn0037606.1;Parent=FBgn0037606.1.mrna1;Target=FBgn0037606.1 638 1436 +
Chr2	stalkie_big_nohaplotig	exon	107390962	107391082	99	-	.	ID=FBgn0037606.1.mrna1.exon4;Name=FBgn0037606.1;Parent=FBgn0037606.1.mrna1;Target=FBgn0037606.1 1437 1557 +
Chr2	stalkie_big_nohaplotig	exon	107390716	107390895	100	-	.	ID=FBgn0037606.1.mrna1.exon5;Name=FBgn0037606.1;Parent=FBgn0037606.1.mrna1;Target=FBgn0037606.1 1558 1737 +
Chr2	stalkie_big_nohaplotig	CDS	107404129	107404359	99	-	0	ID=FBgn0037606.1.mrna1.cds1;Name=FBgn0037606.1;Parent=FBgn0037606.1.mrna1;Target=FBgn0037606.1 1 231 +
Chr2	stalkie_big_nohaplotig	CDS	107392986	107393391	100	-	0	ID=FBgn0037606.1.mrna1.cds2;Name=FBgn0037606.1;Parent=FBgn0037606.1.mrna1;Target=FBgn0037606.1 232 637 +
Chr2	stalkie_big_nohaplotig	CDS	107392126	107392924	99	-	1	ID=FBgn0037606.1.mrna1.cds3;Name=FBgn0037606.1;Parent=FBgn0037606.1.mrna1;Target=FBgn0037606.1 638 1436 +
Chr2	stalkie_big_nohaplotig	CDS	107390962	107391082	99	-	2	ID=FBgn0037606.1.mrna1.cds4;Name=FBgn0037606.1;Parent=FBgn0037606.1.mrna1;Target=FBgn0037606.1 1437 1557 +
Chr2	stalkie_big_nohaplotig	CDS	107390716	107390895	100	-	0	ID=FBgn0037606.1.mrna1.cds5;Name=FBgn0037606.1;Parent=FBgn0037606.1.mrna1;Target=FBgn0037606.1 1558 1737 +
Chr2	stalkie_big_nohaplotig	mRNA	144990878	144998541	.	-	.	ID=FBgn0003861.1.mrna1;Name=FBgn0003861.1;Parent=FBgn0003861.1.path1;Dir=sensecoverage=100.0;identity=99.1;matches=3673;mismatches=32;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	144998384	144998541	100	-	.	ID=FBgn0003861.1.mrna1.exon1;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 1 158 +
Chr2	stalkie_big_nohaplotig	exon	144998083	144998323	99	-	.	ID=FBgn0003861.1.mrna1.exon2;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 159 399 +
Chr2	stalkie_big_nohaplotig	exon	144997868	144998010	99	-	.	ID=FBgn0003861.1.mrna1.exon3;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 400 542 +
Chr2	stalkie_big_nohaplotig	exon	144997007	144997208	99	-	.	ID=FBgn0003861.1.mrna1.exon4;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 543 744 +
Chr2	stalkie_big_nohaplotig	exon	144996729	144996905	100	-	.	ID=FBgn0003861.1.mrna1.exon5;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 745 921 +
Chr2	stalkie_big_nohaplotig	exon	144996431	144996665	99	-	.	ID=FBgn0003861.1.mrna1.exon6;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 922 1156 +
Chr2	stalkie_big_nohaplotig	exon	144996217	144996369	100	-	.	ID=FBgn0003861.1.mrna1.exon7;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 1157 1309 +
Chr2	stalkie_big_nohaplotig	exon	144994736	144994881	98	-	.	ID=FBgn0003861.1.mrna1.exon8;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 1310 1455 +
Chr2	stalkie_big_nohaplotig	exon	144994177	144994544	99	-	.	ID=FBgn0003861.1.mrna1.exon9;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 1456 1823 +
Chr2	stalkie_big_nohaplotig	exon	144993758	144994115	100	-	.	ID=FBgn0003861.1.mrna1.exon10;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 1824 2181 +
Chr2	stalkie_big_nohaplotig	exon	144993110	144993329	99	-	.	ID=FBgn0003861.1.mrna1.exon11;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 2182 2401 +
Chr2	stalkie_big_nohaplotig	exon	144992824	144992989	100	-	.	ID=FBgn0003861.1.mrna1.exon12;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 2402 2567 +
Chr2	stalkie_big_nohaplotig	exon	144992088	144992248	99	-	.	ID=FBgn0003861.1.mrna1.exon13;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 2568 2728 +
Chr2	stalkie_big_nohaplotig	exon	144991858	144992021	100	-	.	ID=FBgn0003861.1.mrna1.exon14;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 2729 2892 +
Chr2	stalkie_big_nohaplotig	exon	144990878	144991690	97	-	.	ID=FBgn0003861.1.mrna1.exon15;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 2893 3705 +
Chr2	stalkie_big_nohaplotig	CDS	144998384	144998541	100	-	0	ID=FBgn0003861.1.mrna1.cds1;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 1 158 +
Chr2	stalkie_big_nohaplotig	CDS	144998083	144998323	99	-	2	ID=FBgn0003861.1.mrna1.cds2;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 159 399 +
Chr2	stalkie_big_nohaplotig	CDS	144997868	144998010	99	-	0	ID=FBgn0003861.1.mrna1.cds3;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 400 542 +
Chr2	stalkie_big_nohaplotig	CDS	144997007	144997208	99	-	2	ID=FBgn0003861.1.mrna1.cds4;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 543 744 +
Chr2	stalkie_big_nohaplotig	CDS	144996729	144996905	100	-	0	ID=FBgn0003861.1.mrna1.cds5;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 745 921 +
Chr2	stalkie_big_nohaplotig	CDS	144996431	144996665	99	-	0	ID=FBgn0003861.1.mrna1.cds6;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 922 1156 +
Chr2	stalkie_big_nohaplotig	CDS	144996217	144996369	100	-	1	ID=FBgn0003861.1.mrna1.cds7;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 1157 1309 +
Chr2	stalkie_big_nohaplotig	CDS	144994736	144994881	98	-	1	ID=FBgn0003861.1.mrna1.cds8;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 1310 1455 +
Chr2	stalkie_big_nohaplotig	CDS	144994177	144994544	99	-	0	ID=FBgn0003861.1.mrna1.cds9;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 1456 1823 +
Chr2	stalkie_big_nohaplotig	CDS	144993758	144994115	100	-	2	ID=FBgn0003861.1.mrna1.cds10;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 1824 2181 +
Chr2	stalkie_big_nohaplotig	CDS	144993110	144993329	99	-	0	ID=FBgn0003861.1.mrna1.cds11;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 2182 2401 +
Chr2	stalkie_big_nohaplotig	CDS	144992824	144992989	100	-	1	ID=FBgn0003861.1.mrna1.cds12;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 2402 2567 +
Chr2	stalkie_big_nohaplotig	CDS	144992088	144992248	99	-	2	ID=FBgn0003861.1.mrna1.cds13;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 2568 2728 +
Chr2	stalkie_big_nohaplotig	CDS	144991858	144992021	100	-	1	ID=FBgn0003861.1.mrna1.cds14;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 2729 2892 +
Chr2	stalkie_big_nohaplotig	CDS	144990878	144991690	97	-	0	ID=FBgn0003861.1.mrna1.cds15;Name=FBgn0003861.1;Parent=FBgn0003861.1.mrna1;Target=FBgn0003861.1 2893 3705 +
Chr2	stalkie_big_nohaplotig	mRNA	147018202	147027459	.	-	.	ID=FBgn0029157.1.mrna1;Name=FBgn0029157.1;Parent=FBgn0029157.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=4075;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	147027397	147027459	100	-	.	ID=FBgn0029157.1.mrna1.exon1;Name=FBgn0029157.1;Parent=FBgn0029157.1.mrna1;Target=FBgn0029157.1 1 63 +
Chr2	stalkie_big_nohaplotig	exon	147022698	147022741	100	-	.	ID=FBgn0029157.1.mrna1.exon2;Name=FBgn0029157.1;Parent=FBgn0029157.1.mrna1;Target=FBgn0029157.1 64 107 +
Chr2	stalkie_big_nohaplotig	exon	147022438	147022627	100	-	.	ID=FBgn0029157.1.mrna1.exon3;Name=FBgn0029157.1;Parent=FBgn0029157.1.mrna1;Target=FBgn0029157.1 108 297 +
Chr2	stalkie_big_nohaplotig	exon	147021928	147022376	100	-	.	ID=FBgn0029157.1.mrna1.exon4;Name=FBgn0029157.1;Parent=FBgn0029157.1.mrna1;Target=FBgn0029157.1 298 746 +
Chr2	stalkie_big_nohaplotig	exon	147021763	147021828	100	-	.	ID=FBgn0029157.1.mrna1.exon5;Name=FBgn0029157.1;Parent=FBgn0029157.1.mrna1;Target=FBgn0029157.1 747 812 +
Chr2	stalkie_big_nohaplotig	exon	147021499	147021693	100	-	.	ID=FBgn0029157.1.mrna1.exon6;Name=FBgn0029157.1;Parent=FBgn0029157.1.mrna1;Target=FBgn0029157.1 813 1007 +
Chr2	stalkie_big_nohaplotig	exon	147021061	147021330	100	-	.	ID=FBgn0029157.1.mrna1.exon7;Name=FBgn0029157.1;Parent=FBgn0029157.1.mrna1;Target=FBgn0029157.1 1008 1277 +
Chr2	stalkie_big_nohaplotig	exon	147018202	147021001	99	-	.	ID=FBgn0029157.1.mrna1.exon8;Name=FBgn0029157.1;Parent=FBgn0029157.1.mrna1;Target=FBgn0029157.1 1278 4077 +
Chr2	stalkie_big_nohaplotig	CDS	147027397	147027459	100	-	0	ID=FBgn0029157.1.mrna1.cds1;Name=FBgn0029157.1;Parent=FBgn0029157.1.mrna1;Target=FBgn0029157.1 1 63 +
Chr2	stalkie_big_nohaplotig	CDS	147022698	147022741	100	-	0	ID=FBgn0029157.1.mrna1.cds2;Name=FBgn0029157.1;Parent=FBgn0029157.1.mrna1;Target=FBgn0029157.1 64 107 +
Chr2	stalkie_big_nohaplotig	CDS	147022438	147022627	100	-	2	ID=FBgn0029157.1.mrna1.cds3;Name=FBgn0029157.1;Parent=FBgn0029157.1.mrna1;Target=FBgn0029157.1 108 297 +
Chr2	stalkie_big_nohaplotig	CDS	147021928	147022376	100	-	0	ID=FBgn0029157.1.mrna1.cds4;Name=FBgn0029157.1;Parent=FBgn0029157.1.mrna1;Target=FBgn0029157.1 298 746 +
Chr2	stalkie_big_nohaplotig	CDS	147021763	147021828	100	-	2	ID=FBgn0029157.1.mrna1.cds5;Name=FBgn0029157.1;Parent=FBgn0029157.1.mrna1;Target=FBgn0029157.1 747 812 +
Chr2	stalkie_big_nohaplotig	CDS	147021499	147021693	100	-	2	ID=FBgn0029157.1.mrna1.cds6;Name=FBgn0029157.1;Parent=FBgn0029157.1.mrna1;Target=FBgn0029157.1 813 1007 +
Chr2	stalkie_big_nohaplotig	CDS	147021061	147021330	100	-	2	ID=FBgn0029157.1.mrna1.cds7;Name=FBgn0029157.1;Parent=FBgn0029157.1.mrna1;Target=FBgn0029157.1 1008 1277 +
Chr2	stalkie_big_nohaplotig	CDS	147018202	147021001	99	-	2	ID=FBgn0029157.1.mrna1.cds8;Name=FBgn0029157.1;Parent=FBgn0029157.1.mrna1;Target=FBgn0029157.1 1278 4077 +
Chr1	stalkie_big_nohaplotig	mRNA	49807608	49811997	.	-	.	ID=FBgn0053291.1.mrna1;Name=FBgn0053291.1;Parent=FBgn0053291.1.path1;Dir=sensecoverage=91.8;identity=99.7;matches=3994;mismatches=12;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	49808996	49811997	99	-	.	ID=FBgn0053291.1.mrna1.exon1;Name=FBgn0053291.1;Parent=FBgn0053291.1.mrna1;Target=FBgn0053291.1 360 3361 +
Chr1	stalkie_big_nohaplotig	exon	49808572	49808935	100	-	.	ID=FBgn0053291.1.mrna1.exon2;Name=FBgn0053291.1;Parent=FBgn0053291.1.mrna1;Target=FBgn0053291.1 3362 3725 +
Chr1	stalkie_big_nohaplotig	exon	49807987	49808311	100	-	.	ID=FBgn0053291.1.mrna1.exon3;Name=FBgn0053291.1;Parent=FBgn0053291.1.mrna1;Target=FBgn0053291.1 3726 4050 +
Chr1	stalkie_big_nohaplotig	exon	49807608	49807922	99	-	.	ID=FBgn0053291.1.mrna1.exon4;Name=FBgn0053291.1;Parent=FBgn0053291.1.mrna1;Target=FBgn0053291.1 4051 4365 +
Chr1	stalkie_big_nohaplotig	CDS	49808996	49811996	99	-	0	ID=FBgn0053291.1.mrna1.cds1;Name=FBgn0053291.1;Parent=FBgn0053291.1.mrna1;Target=FBgn0053291.1 361 3361 +
Chr1	stalkie_big_nohaplotig	CDS	49808572	49808935	100	-	1	ID=FBgn0053291.1.mrna1.cds2;Name=FBgn0053291.1;Parent=FBgn0053291.1.mrna1;Target=FBgn0053291.1 3362 3725 +
Chr1	stalkie_big_nohaplotig	CDS	49807987	49808311	100	-	2	ID=FBgn0053291.1.mrna1.cds3;Name=FBgn0053291.1;Parent=FBgn0053291.1.mrna1;Target=FBgn0053291.1 3726 4050 +
Chr1	stalkie_big_nohaplotig	CDS	49807608	49807922	99	-	0	ID=FBgn0053291.1.mrna1.cds4;Name=FBgn0053291.1;Parent=FBgn0053291.1.mrna1;Target=FBgn0053291.1 4051 4365 +
Chr2	stalkie_big_nohaplotig	mRNA	37386389	37390112	.	-	.	ID=FBgn0023477.1.mrna1;Name=FBgn0023477.1;Parent=FBgn0023477.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1011;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	37390007	37390112	100	-	.	ID=FBgn0023477.1.mrna1.exon1;Name=FBgn0023477.1;Parent=FBgn0023477.1.mrna1;Target=FBgn0023477.1 1 106 +
Chr2	stalkie_big_nohaplotig	exon	37387229	37387352	100	-	.	ID=FBgn0023477.1.mrna1.exon2;Name=FBgn0023477.1;Parent=FBgn0023477.1.mrna1;Target=FBgn0023477.1 107 230 +
Chr2	stalkie_big_nohaplotig	exon	37386389	37387169	100	-	.	ID=FBgn0023477.1.mrna1.exon3;Name=FBgn0023477.1;Parent=FBgn0023477.1.mrna1;Target=FBgn0023477.1 231 1011 +
Chr2	stalkie_big_nohaplotig	CDS	37390007	37390112	100	-	0	ID=FBgn0023477.1.mrna1.cds1;Name=FBgn0023477.1;Parent=FBgn0023477.1.mrna1;Target=FBgn0023477.1 1 106 +
Chr2	stalkie_big_nohaplotig	CDS	37387229	37387352	100	-	1	ID=FBgn0023477.1.mrna1.cds2;Name=FBgn0023477.1;Parent=FBgn0023477.1.mrna1;Target=FBgn0023477.1 107 230 +
Chr2	stalkie_big_nohaplotig	CDS	37386389	37387169	100	-	2	ID=FBgn0023477.1.mrna1.cds3;Name=FBgn0023477.1;Parent=FBgn0023477.1.mrna1;Target=FBgn0023477.1 231 1011 +
Chr2	stalkie_big_nohaplotig	mRNA	153039400	153048208	.	+	.	ID=FBgn0029155.1.mrna1;Name=FBgn0029155.1;Parent=FBgn0029155.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1885;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	153039400	153039431	100	+	.	ID=FBgn0029155.1.mrna1.exon1;Name=FBgn0029155.1;Parent=FBgn0029155.1.mrna1;Target=FBgn0029155.1 1 32 +
Chr2	stalkie_big_nohaplotig	exon	153044933	153045119	100	+	.	ID=FBgn0029155.1.mrna1.exon2;Name=FBgn0029155.1;Parent=FBgn0029155.1.mrna1;Target=FBgn0029155.1 33 219 +
Chr2	stalkie_big_nohaplotig	exon	153045271	153045611	99	+	.	ID=FBgn0029155.1.mrna1.exon3;Name=FBgn0029155.1;Parent=FBgn0029155.1.mrna1;Target=FBgn0029155.1 220 560 +
Chr2	stalkie_big_nohaplotig	exon	153045678	153046233	100	+	.	ID=FBgn0029155.1.mrna1.exon4;Name=FBgn0029155.1;Parent=FBgn0029155.1.mrna1;Target=FBgn0029155.1 561 1116 +
Chr2	stalkie_big_nohaplotig	exon	153046288	153046440	100	+	.	ID=FBgn0029155.1.mrna1.exon5;Name=FBgn0029155.1;Parent=FBgn0029155.1.mrna1;Target=FBgn0029155.1 1117 1269 +
Chr2	stalkie_big_nohaplotig	exon	153046510	153046662	100	+	.	ID=FBgn0029155.1.mrna1.exon6;Name=FBgn0029155.1;Parent=FBgn0029155.1.mrna1;Target=FBgn0029155.1 1270 1422 +
Chr2	stalkie_big_nohaplotig	exon	153046719	153047013	100	+	.	ID=FBgn0029155.1.mrna1.exon7;Name=FBgn0029155.1;Parent=FBgn0029155.1.mrna1;Target=FBgn0029155.1 1423 1717 +
Chr2	stalkie_big_nohaplotig	exon	153048039	153048208	99	+	.	ID=FBgn0029155.1.mrna1.exon8;Name=FBgn0029155.1;Parent=FBgn0029155.1.mrna1;Target=FBgn0029155.1 1718 1887 +
Chr2	stalkie_big_nohaplotig	CDS	153039400	153039431	100	+	0	ID=FBgn0029155.1.mrna1.cds1;Name=FBgn0029155.1;Parent=FBgn0029155.1.mrna1;Target=FBgn0029155.1 1 32 +
Chr2	stalkie_big_nohaplotig	CDS	153044933	153045119	100	+	2	ID=FBgn0029155.1.mrna1.cds2;Name=FBgn0029155.1;Parent=FBgn0029155.1.mrna1;Target=FBgn0029155.1 33 219 +
Chr2	stalkie_big_nohaplotig	CDS	153045271	153045611	99	+	0	ID=FBgn0029155.1.mrna1.cds3;Name=FBgn0029155.1;Parent=FBgn0029155.1.mrna1;Target=FBgn0029155.1 220 560 +
Chr2	stalkie_big_nohaplotig	CDS	153045678	153046233	100	+	2	ID=FBgn0029155.1.mrna1.cds4;Name=FBgn0029155.1;Parent=FBgn0029155.1.mrna1;Target=FBgn0029155.1 561 1116 +
Chr2	stalkie_big_nohaplotig	CDS	153046288	153046440	100	+	0	ID=FBgn0029155.1.mrna1.cds5;Name=FBgn0029155.1;Parent=FBgn0029155.1.mrna1;Target=FBgn0029155.1 1117 1269 +
Chr2	stalkie_big_nohaplotig	CDS	153046510	153046662	100	+	0	ID=FBgn0029155.1.mrna1.cds6;Name=FBgn0029155.1;Parent=FBgn0029155.1.mrna1;Target=FBgn0029155.1 1270 1422 +
Chr2	stalkie_big_nohaplotig	CDS	153046719	153047013	100	+	0	ID=FBgn0029155.1.mrna1.cds7;Name=FBgn0029155.1;Parent=FBgn0029155.1.mrna1;Target=FBgn0029155.1 1423 1717 +
Chr2	stalkie_big_nohaplotig	CDS	153048039	153048208	99	+	1	ID=FBgn0029155.1.mrna1.cds8;Name=FBgn0029155.1;Parent=FBgn0029155.1.mrna1;Target=FBgn0029155.1 1718 1887 +
Chr2	stalkie_big_nohaplotig	mRNA	47503024	47503287	.	+	.	ID=FBgn0000044.mrna1;Name=FBgn0000044;Parent=FBgn0000044.path1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=263;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	47503024	47503287	99	+	.	ID=FBgn0000044.mrna1.exon1;Name=FBgn0000044;Parent=FBgn0000044.mrna1;Target=FBgn0000044 264 1 .
Chr2	stalkie_big_nohaplotig	CDS	47503024	47503287	99	+	0	ID=FBgn0000044.mrna1.cds1;Name=FBgn0000044;Parent=FBgn0000044.mrna1;Target=FBgn0000044 264 1 .
Chr1	stalkie_big_nohaplotig	mRNA	139940050	139978632	.	-	.	ID=FBgn0000210.1.mrna1;Name=FBgn0000210.1;Parent=FBgn0000210.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1484;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	139978432	139978632	100	-	.	ID=FBgn0000210.1.mrna1.exon1;Name=FBgn0000210.1;Parent=FBgn0000210.1.mrna1;Target=FBgn0000210.1 1 201 +
Chr1	stalkie_big_nohaplotig	exon	139966662	139966850	99	-	.	ID=FBgn0000210.1.mrna1.exon2;Name=FBgn0000210.1;Parent=FBgn0000210.1.mrna1;Target=FBgn0000210.1 202 390 +
Chr1	stalkie_big_nohaplotig	exon	139966186	139966585	99	-	.	ID=FBgn0000210.1.mrna1.exon3;Name=FBgn0000210.1;Parent=FBgn0000210.1.mrna1;Target=FBgn0000210.1 391 790 +
Chr1	stalkie_big_nohaplotig	exon	139964971	139965226	100	-	.	ID=FBgn0000210.1.mrna1.exon4;Name=FBgn0000210.1;Parent=FBgn0000210.1.mrna1;Target=FBgn0000210.1 791 1046 +
Chr1	stalkie_big_nohaplotig	exon	139964759	139964901	99	-	.	ID=FBgn0000210.1.mrna1.exon5;Name=FBgn0000210.1;Parent=FBgn0000210.1.mrna1;Target=FBgn0000210.1 1047 1189 +
Chr1	stalkie_big_nohaplotig	exon	139963444	139963494	100	-	.	ID=FBgn0000210.1.mrna1.exon6;Name=FBgn0000210.1;Parent=FBgn0000210.1.mrna1;Target=FBgn0000210.1 1190 1240 +
Chr1	stalkie_big_nohaplotig	exon	139940050	139940297	100	-	.	ID=FBgn0000210.1.mrna1.exon7;Name=FBgn0000210.1;Parent=FBgn0000210.1.mrna1;Target=FBgn0000210.1 1241 1488 +
Chr1	stalkie_big_nohaplotig	CDS	139978432	139978632	100	-	0	ID=FBgn0000210.1.mrna1.cds1;Name=FBgn0000210.1;Parent=FBgn0000210.1.mrna1;Target=FBgn0000210.1 1 201 +
Chr1	stalkie_big_nohaplotig	CDS	139966662	139966850	99	-	0	ID=FBgn0000210.1.mrna1.cds2;Name=FBgn0000210.1;Parent=FBgn0000210.1.mrna1;Target=FBgn0000210.1 202 390 +
Chr1	stalkie_big_nohaplotig	CDS	139966186	139966585	99	-	0	ID=FBgn0000210.1.mrna1.cds3;Name=FBgn0000210.1;Parent=FBgn0000210.1.mrna1;Target=FBgn0000210.1 391 790 +
Chr1	stalkie_big_nohaplotig	CDS	139964971	139965226	100	-	1	ID=FBgn0000210.1.mrna1.cds4;Name=FBgn0000210.1;Parent=FBgn0000210.1.mrna1;Target=FBgn0000210.1 791 1046 +
Chr1	stalkie_big_nohaplotig	CDS	139964759	139964901	99	-	2	ID=FBgn0000210.1.mrna1.cds5;Name=FBgn0000210.1;Parent=FBgn0000210.1.mrna1;Target=FBgn0000210.1 1047 1189 +
Chr1	stalkie_big_nohaplotig	CDS	139963444	139963494	100	-	1	ID=FBgn0000210.1.mrna1.cds6;Name=FBgn0000210.1;Parent=FBgn0000210.1.mrna1;Target=FBgn0000210.1 1190 1240 +
Chr1	stalkie_big_nohaplotig	CDS	139940050	139940297	100	-	1	ID=FBgn0000210.1.mrna1.cds7;Name=FBgn0000210.1;Parent=FBgn0000210.1.mrna1;Target=FBgn0000210.1 1241 1488 +
Chr1	stalkie_big_nohaplotig	mRNA	18283056	18297180	.	+	.	ID=FBgn0264307.1.mrna1;Name=FBgn0264307.1;Parent=FBgn0264307.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1768;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	18283056	18283146	100	+	.	ID=FBgn0264307.1.mrna1.exon1;Name=FBgn0264307.1;Parent=FBgn0264307.1.mrna1;Target=FBgn0264307.1 1 91 +
Chr1	stalkie_big_nohaplotig	exon	18285844	18286064	99	+	.	ID=FBgn0264307.1.mrna1.exon2;Name=FBgn0264307.1;Parent=FBgn0264307.1.mrna1;Target=FBgn0264307.1 92 312 +
Chr1	stalkie_big_nohaplotig	exon	18288263	18288318	100	+	.	ID=FBgn0264307.1.mrna1.exon3;Name=FBgn0264307.1;Parent=FBgn0264307.1.mrna1;Target=FBgn0264307.1 313 368 +
Chr1	stalkie_big_nohaplotig	exon	18295779	18297180	99	+	.	ID=FBgn0264307.1.mrna1.exon4;Name=FBgn0264307.1;Parent=FBgn0264307.1.mrna1;Target=FBgn0264307.1 369 1770 +
Chr1	stalkie_big_nohaplotig	CDS	18283056	18283146	100	+	0	ID=FBgn0264307.1.mrna1.cds1;Name=FBgn0264307.1;Parent=FBgn0264307.1.mrna1;Target=FBgn0264307.1 1 91 +
Chr1	stalkie_big_nohaplotig	CDS	18285844	18286064	99	+	1	ID=FBgn0264307.1.mrna1.cds2;Name=FBgn0264307.1;Parent=FBgn0264307.1.mrna1;Target=FBgn0264307.1 92 312 +
Chr1	stalkie_big_nohaplotig	CDS	18288263	18288318	100	+	0	ID=FBgn0264307.1.mrna1.cds3;Name=FBgn0264307.1;Parent=FBgn0264307.1.mrna1;Target=FBgn0264307.1 313 368 +
Chr1	stalkie_big_nohaplotig	CDS	18295779	18297180	99	+	2	ID=FBgn0264307.1.mrna1.cds4;Name=FBgn0264307.1;Parent=FBgn0264307.1.mrna1;Target=FBgn0264307.1 369 1770 +
Chr1	stalkie_big_nohaplotig	mRNA	137214704	137223515	.	-	.	ID=FBgn0003656.1.mrna1;Name=FBgn0003656.1;Parent=FBgn0003656.1.path1;Dir=sensecoverage=98.0;identity=99.7;matches=3885;mismatches=12;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	137222769	137223515	99	-	.	ID=FBgn0003656.1.mrna1.exon1;Name=FBgn0003656.1;Parent=FBgn0003656.1.mrna1;Target=FBgn0003656.1 79 825 +
Chr1	stalkie_big_nohaplotig	exon	137222166	137222702	99	-	.	ID=FBgn0003656.1.mrna1.exon2;Name=FBgn0003656.1;Parent=FBgn0003656.1.mrna1;Target=FBgn0003656.1 826 1362 +
Chr1	stalkie_big_nohaplotig	exon	137221860	137222086	100	-	.	ID=FBgn0003656.1.mrna1.exon3;Name=FBgn0003656.1;Parent=FBgn0003656.1.mrna1;Target=FBgn0003656.1 1363 1589 +
Chr1	stalkie_big_nohaplotig	exon	137220686	137221251	100	-	.	ID=FBgn0003656.1.mrna1.exon4;Name=FBgn0003656.1;Parent=FBgn0003656.1.mrna1;Target=FBgn0003656.1 1590 2155 +
Chr1	stalkie_big_nohaplotig	exon	137220205	137220620	99	-	.	ID=FBgn0003656.1.mrna1.exon5;Name=FBgn0003656.1;Parent=FBgn0003656.1.mrna1;Target=FBgn0003656.1 2156 2571 +
Chr1	stalkie_big_nohaplotig	exon	137219861	137220136	99	-	.	ID=FBgn0003656.1.mrna1.exon6;Name=FBgn0003656.1;Parent=FBgn0003656.1.mrna1;Target=FBgn0003656.1 2572 2847 +
Chr1	stalkie_big_nohaplotig	exon	137219609	137219795	99	-	.	ID=FBgn0003656.1.mrna1.exon7;Name=FBgn0003656.1;Parent=FBgn0003656.1.mrna1;Target=FBgn0003656.1 2848 3034 +
Chr1	stalkie_big_nohaplotig	exon	137217414	137217530	100	-	.	ID=FBgn0003656.1.mrna1.exon8;Name=FBgn0003656.1;Parent=FBgn0003656.1.mrna1;Target=FBgn0003656.1 3035 3151 +
Chr1	stalkie_big_nohaplotig	exon	137215449	137215660	100	-	.	ID=FBgn0003656.1.mrna1.exon9;Name=FBgn0003656.1;Parent=FBgn0003656.1.mrna1;Target=FBgn0003656.1 3152 3363 +
Chr1	stalkie_big_nohaplotig	exon	137215023	137215376	99	-	.	ID=FBgn0003656.1.mrna1.exon10;Name=FBgn0003656.1;Parent=FBgn0003656.1.mrna1;Target=FBgn0003656.1 3364 3717 +
Chr1	stalkie_big_nohaplotig	exon	137214704	137214961	100	-	.	ID=FBgn0003656.1.mrna1.exon11;Name=FBgn0003656.1;Parent=FBgn0003656.1.mrna1;Target=FBgn0003656.1 3718 3975 +
Chr1	stalkie_big_nohaplotig	CDS	137222769	137223515	99	-	0	ID=FBgn0003656.1.mrna1.cds1;Name=FBgn0003656.1;Parent=FBgn0003656.1.mrna1;Target=FBgn0003656.1 79 825 +
Chr1	stalkie_big_nohaplotig	CDS	137222166	137222702	99	-	0	ID=FBgn0003656.1.mrna1.cds2;Name=FBgn0003656.1;Parent=FBgn0003656.1.mrna1;Target=FBgn0003656.1 826 1362 +
Chr1	stalkie_big_nohaplotig	CDS	137221860	137222086	100	-	0	ID=FBgn0003656.1.mrna1.cds3;Name=FBgn0003656.1;Parent=FBgn0003656.1.mrna1;Target=FBgn0003656.1 1363 1589 +
Chr1	stalkie_big_nohaplotig	CDS	137220686	137221251	100	-	2	ID=FBgn0003656.1.mrna1.cds4;Name=FBgn0003656.1;Parent=FBgn0003656.1.mrna1;Target=FBgn0003656.1 1590 2155 +
Chr1	stalkie_big_nohaplotig	CDS	137220205	137220620	99	-	1	ID=FBgn0003656.1.mrna1.cds5;Name=FBgn0003656.1;Parent=FBgn0003656.1.mrna1;Target=FBgn0003656.1 2156 2571 +
Chr1	stalkie_big_nohaplotig	CDS	137219861	137220136	99	-	0	ID=FBgn0003656.1.mrna1.cds6;Name=FBgn0003656.1;Parent=FBgn0003656.1.mrna1;Target=FBgn0003656.1 2572 2847 +
Chr1	stalkie_big_nohaplotig	CDS	137219609	137219795	99	-	0	ID=FBgn0003656.1.mrna1.cds7;Name=FBgn0003656.1;Parent=FBgn0003656.1.mrna1;Target=FBgn0003656.1 2848 3034 +
Chr1	stalkie_big_nohaplotig	CDS	137217414	137217530	100	-	1	ID=FBgn0003656.1.mrna1.cds8;Name=FBgn0003656.1;Parent=FBgn0003656.1.mrna1;Target=FBgn0003656.1 3035 3151 +
Chr1	stalkie_big_nohaplotig	CDS	137215449	137215660	100	-	1	ID=FBgn0003656.1.mrna1.cds9;Name=FBgn0003656.1;Parent=FBgn0003656.1.mrna1;Target=FBgn0003656.1 3152 3363 +
Chr1	stalkie_big_nohaplotig	CDS	137215023	137215376	99	-	0	ID=FBgn0003656.1.mrna1.cds10;Name=FBgn0003656.1;Parent=FBgn0003656.1.mrna1;Target=FBgn0003656.1 3364 3717 +
Chr1	stalkie_big_nohaplotig	CDS	137214704	137214961	100	-	0	ID=FBgn0003656.1.mrna1.cds11;Name=FBgn0003656.1;Parent=FBgn0003656.1.mrna1;Target=FBgn0003656.1 3718 3975 +
ChrX	stalkie_big_nohaplotig	mRNA	22642810	22647386	.	+	.	ID=ORF17.mrna1;Name=ORF17;Parent=ORF17.path1;Dir=sensecoverage=100.0;identity=98.7;matches=4402;mismatches=44;indels=12;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	22642810	22644373	99	+	.	ID=ORF17.mrna1.exon1;Name=ORF17;Parent=ORF17.mrna1;Target=ORF17 1 1564 +
ChrX	stalkie_big_nohaplotig	exon	22644436	22645038	99	+	.	ID=ORF17.mrna1.exon2;Name=ORF17;Parent=ORF17.mrna1;Target=ORF17 1565 2167 +
ChrX	stalkie_big_nohaplotig	exon	22645102	22647386	98	+	.	ID=ORF17.mrna1.exon3;Name=ORF17;Parent=ORF17.mrna1;Target=ORF17 2168 4452 +
ChrX	stalkie_big_nohaplotig	CDS	22642810	22644373	99	+	0	ID=ORF17.mrna1.cds1;Name=ORF17;Parent=ORF17.mrna1;Target=ORF17 1 1564 +
ChrX	stalkie_big_nohaplotig	CDS	22644436	22645038	99	+	1	ID=ORF17.mrna1.cds2;Name=ORF17;Parent=ORF17.mrna1;Target=ORF17 1565 2167 +
ChrX	stalkie_big_nohaplotig	CDS	22645102	22647386	98	+	1	ID=ORF17.mrna1.cds3;Name=ORF17;Parent=ORF17.mrna1;Target=ORF17 2168 4452 +
ChrX	stalkie_big_nohaplotig	mRNA	22638724	22641336	.	-	.	ID=ORF205.mrna1;Name=ORF205;Parent=ORF205.path1;Dir=antisensecoverage=100.0;identity=99.2;matches=2457;mismatches=21;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	22639714	22641336	99	-	.	ID=ORF205.mrna1.exon1;Name=ORF205;Parent=ORF205.mrna1;Target=ORF205 856 2478 -
ChrX	stalkie_big_nohaplotig	exon	22638724	22639578	99	-	.	ID=ORF205.mrna1.exon2;Name=ORF205;Parent=ORF205.mrna1;Target=ORF205 1 855 -
ChrX	stalkie_big_nohaplotig	CDS	22639968	22640087	100	-	0	ID=ORF205.mrna1.cds1;Name=ORF205;Parent=ORF205.mrna1;Target=ORF205 1110 1229 .
ChrX	stalkie_big_nohaplotig	mRNA	22568626	22570839	.	+	.	ID=ORF307.mrna1;Name=ORF307;Parent=ORF307.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2076;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	22568626	22569252	100	+	.	ID=ORF307.mrna1.exon1;Name=ORF307;Parent=ORF307.mrna1;Target=ORF307 1 627 +
ChrX	stalkie_big_nohaplotig	exon	22569332	22570364	100	+	.	ID=ORF307.mrna1.exon2;Name=ORF307;Parent=ORF307.mrna1;Target=ORF307 628 1660 +
ChrX	stalkie_big_nohaplotig	exon	22570424	22570839	100	+	.	ID=ORF307.mrna1.exon3;Name=ORF307;Parent=ORF307.mrna1;Target=ORF307 1661 2076 +
ChrX	stalkie_big_nohaplotig	CDS	22568626	22569252	100	+	0	ID=ORF307.mrna1.cds1;Name=ORF307;Parent=ORF307.mrna1;Target=ORF307 1 627 +
ChrX	stalkie_big_nohaplotig	CDS	22569332	22570364	100	+	0	ID=ORF307.mrna1.cds2;Name=ORF307;Parent=ORF307.mrna1;Target=ORF307 628 1660 +
ChrX	stalkie_big_nohaplotig	CDS	22570424	22570839	100	+	1	ID=ORF307.mrna1.cds3;Name=ORF307;Parent=ORF307.mrna1;Target=ORF307 1661 2076 +
ChrX	stalkie_big_nohaplotig	mRNA	22527494	22529219	.	+	.	ID=FBgn0086691.1.mrna1;Name=FBgn0086691.1;Parent=FBgn0086691.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=498;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	22527494	22527645	100	+	.	ID=FBgn0086691.1.mrna1.exon1;Name=FBgn0086691.1;Parent=FBgn0086691.1.mrna1;Target=FBgn0086691.1 1 152 +
ChrX	stalkie_big_nohaplotig	exon	22528050	22528279	100	+	.	ID=FBgn0086691.1.mrna1.exon2;Name=FBgn0086691.1;Parent=FBgn0086691.1.mrna1;Target=FBgn0086691.1 153 382 +
ChrX	stalkie_big_nohaplotig	exon	22529104	22529219	100	+	.	ID=FBgn0086691.1.mrna1.exon3;Name=FBgn0086691.1;Parent=FBgn0086691.1.mrna1;Target=FBgn0086691.1 383 498 +
ChrX	stalkie_big_nohaplotig	CDS	22527494	22527645	100	+	0	ID=FBgn0086691.1.mrna1.cds1;Name=FBgn0086691.1;Parent=FBgn0086691.1.mrna1;Target=FBgn0086691.1 1 152 +
ChrX	stalkie_big_nohaplotig	CDS	22528050	22528279	100	+	2	ID=FBgn0086691.1.mrna1.cds2;Name=FBgn0086691.1;Parent=FBgn0086691.1.mrna1;Target=FBgn0086691.1 153 382 +
ChrX	stalkie_big_nohaplotig	CDS	22529104	22529219	100	+	1	ID=FBgn0086691.1.mrna1.cds3;Name=FBgn0086691.1;Parent=FBgn0086691.1.mrna1;Target=FBgn0086691.1 383 498 +
Chr1	stalkie_big_nohaplotig	mRNA	59117529	59119150	.	-	.	ID=FBgn0014903.1.mrna1;Name=FBgn0014903.1;Parent=FBgn0014903.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=1213;mismatches=8;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	59118676	59119150	99	-	.	ID=FBgn0014903.1.mrna1.exon1;Name=FBgn0014903.1;Parent=FBgn0014903.1.mrna1;Target=FBgn0014903.1 1 475 +
Chr1	stalkie_big_nohaplotig	exon	59118493	59118619	100	-	.	ID=FBgn0014903.1.mrna1.exon2;Name=FBgn0014903.1;Parent=FBgn0014903.1.mrna1;Target=FBgn0014903.1 476 602 +
Chr1	stalkie_big_nohaplotig	exon	59117897	59118205	99	-	.	ID=FBgn0014903.1.mrna1.exon3;Name=FBgn0014903.1;Parent=FBgn0014903.1.mrna1;Target=FBgn0014903.1 603 911 +
Chr1	stalkie_big_nohaplotig	exon	59117529	59117838	99	-	.	ID=FBgn0014903.1.mrna1.exon4;Name=FBgn0014903.1;Parent=FBgn0014903.1.mrna1;Target=FBgn0014903.1 912 1221 +
Chr1	stalkie_big_nohaplotig	CDS	59118676	59119150	99	-	0	ID=FBgn0014903.1.mrna1.cds1;Name=FBgn0014903.1;Parent=FBgn0014903.1.mrna1;Target=FBgn0014903.1 1 475 +
Chr1	stalkie_big_nohaplotig	CDS	59118493	59118619	100	-	1	ID=FBgn0014903.1.mrna1.cds2;Name=FBgn0014903.1;Parent=FBgn0014903.1.mrna1;Target=FBgn0014903.1 476 602 +
Chr1	stalkie_big_nohaplotig	CDS	59117897	59118205	99	-	2	ID=FBgn0014903.1.mrna1.cds3;Name=FBgn0014903.1;Parent=FBgn0014903.1.mrna1;Target=FBgn0014903.1 603 911 +
Chr1	stalkie_big_nohaplotig	CDS	59117529	59117838	99	-	2	ID=FBgn0014903.1.mrna1.cds4;Name=FBgn0014903.1;Parent=FBgn0014903.1.mrna1;Target=FBgn0014903.1 912 1221 +
Chr1	stalkie_big_nohaplotig	mRNA	59190059	59192666	.	+	.	ID=FBgn0036188.1.mrna1;Name=FBgn0036188.1;Parent=FBgn0036188.1.path1;Dir=sensecoverage=100.0;identity=99.4;matches=713;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	59190059	59190175	99	+	.	ID=FBgn0036188.1.mrna1.exon1;Name=FBgn0036188.1;Parent=FBgn0036188.1.mrna1;Target=FBgn0036188.1 1 117 +
Chr1	stalkie_big_nohaplotig	exon	59190233	59190691	99	+	.	ID=FBgn0036188.1.mrna1.exon2;Name=FBgn0036188.1;Parent=FBgn0036188.1.mrna1;Target=FBgn0036188.1 118 576 +
Chr1	stalkie_big_nohaplotig	exon	59192526	59192666	98	+	.	ID=FBgn0036188.1.mrna1.exon3;Name=FBgn0036188.1;Parent=FBgn0036188.1.mrna1;Target=FBgn0036188.1 577 717 +
Chr1	stalkie_big_nohaplotig	CDS	59190059	59190175	99	+	0	ID=FBgn0036188.1.mrna1.cds1;Name=FBgn0036188.1;Parent=FBgn0036188.1.mrna1;Target=FBgn0036188.1 1 117 +
Chr1	stalkie_big_nohaplotig	CDS	59190233	59190691	99	+	0	ID=FBgn0036188.1.mrna1.cds2;Name=FBgn0036188.1;Parent=FBgn0036188.1.mrna1;Target=FBgn0036188.1 118 576 +
Chr1	stalkie_big_nohaplotig	CDS	59192526	59192666	98	+	0	ID=FBgn0036188.1.mrna1.cds3;Name=FBgn0036188.1;Parent=FBgn0036188.1.mrna1;Target=FBgn0036188.1 577 717 +
Chr2	stalkie_big_nohaplotig	mRNA	90682186	90730998	.	+	.	ID=FBgn0262562.1.mrna1;Name=FBgn0262562.1;Parent=FBgn0262562.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=7051;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	90682186	90683373	99	+	.	ID=FBgn0262562.1.mrna1.exon1;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 1 1188 +
Chr2	stalkie_big_nohaplotig	exon	90696261	90698677	100	+	.	ID=FBgn0262562.1.mrna1.exon2;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 1189 3605 +
Chr2	stalkie_big_nohaplotig	exon	90700526	90701102	100	+	.	ID=FBgn0262562.1.mrna1.exon3;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 3606 4182 +
Chr2	stalkie_big_nohaplotig	exon	90723807	90724067	100	+	.	ID=FBgn0262562.1.mrna1.exon4;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 4183 4443 +
Chr2	stalkie_big_nohaplotig	exon	90724141	90724331	100	+	.	ID=FBgn0262562.1.mrna1.exon5;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 4444 4634 +
Chr2	stalkie_big_nohaplotig	exon	90724393	90724743	100	+	.	ID=FBgn0262562.1.mrna1.exon6;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 4635 4985 +
Chr2	stalkie_big_nohaplotig	exon	90724907	90725001	100	+	.	ID=FBgn0262562.1.mrna1.exon7;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 4986 5080 +
Chr2	stalkie_big_nohaplotig	exon	90725223	90725445	100	+	.	ID=FBgn0262562.1.mrna1.exon8;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 5081 5303 +
Chr2	stalkie_big_nohaplotig	exon	90726469	90726560	100	+	.	ID=FBgn0262562.1.mrna1.exon9;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 5304 5395 +
Chr2	stalkie_big_nohaplotig	exon	90726788	90727449	100	+	.	ID=FBgn0262562.1.mrna1.exon10;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 5396 6057 +
Chr2	stalkie_big_nohaplotig	exon	90727547	90727698	100	+	.	ID=FBgn0262562.1.mrna1.exon11;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 6058 6209 +
Chr2	stalkie_big_nohaplotig	exon	90728468	90728535	100	+	.	ID=FBgn0262562.1.mrna1.exon12;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 6210 6277 +
Chr2	stalkie_big_nohaplotig	exon	90728606	90728745	100	+	.	ID=FBgn0262562.1.mrna1.exon13;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 6278 6417 +
Chr2	stalkie_big_nohaplotig	exon	90728799	90728920	100	+	.	ID=FBgn0262562.1.mrna1.exon14;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 6418 6539 +
Chr2	stalkie_big_nohaplotig	exon	90730405	90730758	100	+	.	ID=FBgn0262562.1.mrna1.exon15;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 6540 6893 +
Chr2	stalkie_big_nohaplotig	exon	90730839	90730998	100	+	.	ID=FBgn0262562.1.mrna1.exon16;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 6894 7053 +
Chr2	stalkie_big_nohaplotig	CDS	90682186	90683373	99	+	0	ID=FBgn0262562.1.mrna1.cds1;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 1 1188 +
Chr2	stalkie_big_nohaplotig	CDS	90696261	90698677	100	+	0	ID=FBgn0262562.1.mrna1.cds2;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 1189 3605 +
Chr2	stalkie_big_nohaplotig	CDS	90700526	90701102	100	+	2	ID=FBgn0262562.1.mrna1.cds3;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 3606 4182 +
Chr2	stalkie_big_nohaplotig	CDS	90723807	90724067	100	+	0	ID=FBgn0262562.1.mrna1.cds4;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 4183 4443 +
Chr2	stalkie_big_nohaplotig	CDS	90724141	90724331	100	+	0	ID=FBgn0262562.1.mrna1.cds5;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 4444 4634 +
Chr2	stalkie_big_nohaplotig	CDS	90724393	90724743	100	+	2	ID=FBgn0262562.1.mrna1.cds6;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 4635 4985 +
Chr2	stalkie_big_nohaplotig	CDS	90724907	90725001	100	+	2	ID=FBgn0262562.1.mrna1.cds7;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 4986 5080 +
Chr2	stalkie_big_nohaplotig	CDS	90725223	90725445	100	+	1	ID=FBgn0262562.1.mrna1.cds8;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 5081 5303 +
Chr2	stalkie_big_nohaplotig	CDS	90726469	90726560	100	+	2	ID=FBgn0262562.1.mrna1.cds9;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 5304 5395 +
Chr2	stalkie_big_nohaplotig	CDS	90726788	90727449	100	+	1	ID=FBgn0262562.1.mrna1.cds10;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 5396 6057 +
Chr2	stalkie_big_nohaplotig	CDS	90727547	90727698	100	+	0	ID=FBgn0262562.1.mrna1.cds11;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 6058 6209 +
Chr2	stalkie_big_nohaplotig	CDS	90728468	90728535	100	+	2	ID=FBgn0262562.1.mrna1.cds12;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 6210 6277 +
Chr2	stalkie_big_nohaplotig	CDS	90728606	90728745	100	+	1	ID=FBgn0262562.1.mrna1.cds13;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 6278 6417 +
Chr2	stalkie_big_nohaplotig	CDS	90728799	90728920	100	+	0	ID=FBgn0262562.1.mrna1.cds14;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 6418 6539 +
Chr2	stalkie_big_nohaplotig	CDS	90730405	90730758	100	+	2	ID=FBgn0262562.1.mrna1.cds15;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 6540 6893 +
Chr2	stalkie_big_nohaplotig	CDS	90730839	90730998	100	+	2	ID=FBgn0262562.1.mrna1.cds16;Name=FBgn0262562.1;Parent=FBgn0262562.1.mrna1;Target=FBgn0262562.1 6894 7053 +
Chr1	stalkie_big_nohaplotig	mRNA	23353328	23360369	.	+	.	ID=FBgn0010825.1.mrna1;Name=FBgn0010825.1;Parent=FBgn0010825.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=4484;mismatches=15;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	23353328	23353396	100	+	.	ID=FBgn0010825.1.mrna1.exon1;Name=FBgn0010825.1;Parent=FBgn0010825.1.mrna1;Target=FBgn0010825.1 1 69 +
Chr1	stalkie_big_nohaplotig	exon	23355805	23355961	100	+	.	ID=FBgn0010825.1.mrna1.exon2;Name=FBgn0010825.1;Parent=FBgn0010825.1.mrna1;Target=FBgn0010825.1 70 226 +
Chr1	stalkie_big_nohaplotig	exon	23356025	23356101	100	+	.	ID=FBgn0010825.1.mrna1.exon3;Name=FBgn0010825.1;Parent=FBgn0010825.1.mrna1;Target=FBgn0010825.1 227 303 +
Chr1	stalkie_big_nohaplotig	exon	23356174	23360369	99	+	.	ID=FBgn0010825.1.mrna1.exon4;Name=FBgn0010825.1;Parent=FBgn0010825.1.mrna1;Target=FBgn0010825.1 304 4499 +
Chr1	stalkie_big_nohaplotig	CDS	23353328	23353396	100	+	0	ID=FBgn0010825.1.mrna1.cds1;Name=FBgn0010825.1;Parent=FBgn0010825.1.mrna1;Target=FBgn0010825.1 1 69 +
Chr1	stalkie_big_nohaplotig	CDS	23355805	23355961	100	+	0	ID=FBgn0010825.1.mrna1.cds2;Name=FBgn0010825.1;Parent=FBgn0010825.1.mrna1;Target=FBgn0010825.1 70 226 +
Chr1	stalkie_big_nohaplotig	CDS	23356025	23356101	100	+	1	ID=FBgn0010825.1.mrna1.cds3;Name=FBgn0010825.1;Parent=FBgn0010825.1.mrna1;Target=FBgn0010825.1 227 303 +
Chr1	stalkie_big_nohaplotig	CDS	23356174	23360367	99	+	0	ID=FBgn0010825.1.mrna1.cds4;Name=FBgn0010825.1;Parent=FBgn0010825.1.mrna1;Target=FBgn0010825.1 304 4497 +
Chr2	stalkie_big_nohaplotig	mRNA	18692548	18742420	.	-	.	ID=FBgn0020307.1.mrna1;Name=FBgn0020307.1;Parent=FBgn0020307.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2751;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	18742024	18742420	100	-	.	ID=FBgn0020307.1.mrna1.exon1;Name=FBgn0020307.1;Parent=FBgn0020307.1.mrna1;Target=FBgn0020307.1 1 397 +
Chr2	stalkie_big_nohaplotig	exon	18700198	18700401	100	-	.	ID=FBgn0020307.1.mrna1.exon2;Name=FBgn0020307.1;Parent=FBgn0020307.1.mrna1;Target=FBgn0020307.1 398 601 +
Chr2	stalkie_big_nohaplotig	exon	18699445	18699674	100	-	.	ID=FBgn0020307.1.mrna1.exon3;Name=FBgn0020307.1;Parent=FBgn0020307.1.mrna1;Target=FBgn0020307.1 602 831 +
Chr2	stalkie_big_nohaplotig	exon	18694298	18696069	100	-	.	ID=FBgn0020307.1.mrna1.exon4;Name=FBgn0020307.1;Parent=FBgn0020307.1.mrna1;Target=FBgn0020307.1 832 2603 +
Chr2	stalkie_big_nohaplotig	exon	18692548	18692695	100	-	.	ID=FBgn0020307.1.mrna1.exon5;Name=FBgn0020307.1;Parent=FBgn0020307.1.mrna1;Target=FBgn0020307.1 2604 2751 +
Chr2	stalkie_big_nohaplotig	CDS	18742024	18742420	100	-	0	ID=FBgn0020307.1.mrna1.cds1;Name=FBgn0020307.1;Parent=FBgn0020307.1.mrna1;Target=FBgn0020307.1 1 397 +
Chr2	stalkie_big_nohaplotig	CDS	18700198	18700401	100	-	1	ID=FBgn0020307.1.mrna1.cds2;Name=FBgn0020307.1;Parent=FBgn0020307.1.mrna1;Target=FBgn0020307.1 398 601 +
Chr2	stalkie_big_nohaplotig	CDS	18699445	18699674	100	-	1	ID=FBgn0020307.1.mrna1.cds3;Name=FBgn0020307.1;Parent=FBgn0020307.1.mrna1;Target=FBgn0020307.1 602 831 +
Chr2	stalkie_big_nohaplotig	CDS	18694298	18696069	100	-	0	ID=FBgn0020307.1.mrna1.cds4;Name=FBgn0020307.1;Parent=FBgn0020307.1.mrna1;Target=FBgn0020307.1 832 2603 +
Chr2	stalkie_big_nohaplotig	CDS	18692548	18692695	100	-	2	ID=FBgn0020307.1.mrna1.cds5;Name=FBgn0020307.1;Parent=FBgn0020307.1.mrna1;Target=FBgn0020307.1 2604 2751 +
Chr1	stalkie_big_nohaplotig	mRNA	129033485	129035146	.	+	.	ID=FBgn0029958.1.mrna1;Name=FBgn0029958.1;Parent=FBgn0029958.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1404;mismatches=6;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	129033485	129033613	100	+	.	ID=FBgn0029958.1.mrna1.exon1;Name=FBgn0029958.1;Parent=FBgn0029958.1.mrna1;Target=FBgn0029958.1 1 129 +
Chr1	stalkie_big_nohaplotig	exon	129033679	129033990	100	+	.	ID=FBgn0029958.1.mrna1.exon2;Name=FBgn0029958.1;Parent=FBgn0029958.1.mrna1;Target=FBgn0029958.1 130 441 +
Chr1	stalkie_big_nohaplotig	exon	129034057	129034246	100	+	.	ID=FBgn0029958.1.mrna1.exon3;Name=FBgn0029958.1;Parent=FBgn0029958.1.mrna1;Target=FBgn0029958.1 442 631 +
Chr1	stalkie_big_nohaplotig	exon	129034304	129034871	98	+	.	ID=FBgn0029958.1.mrna1.exon4;Name=FBgn0029958.1;Parent=FBgn0029958.1.mrna1;Target=FBgn0029958.1 632 1199 +
Chr1	stalkie_big_nohaplotig	exon	129034936	129035146	100	+	.	ID=FBgn0029958.1.mrna1.exon5;Name=FBgn0029958.1;Parent=FBgn0029958.1.mrna1;Target=FBgn0029958.1 1200 1410 +
Chr1	stalkie_big_nohaplotig	CDS	129033485	129033613	100	+	0	ID=FBgn0029958.1.mrna1.cds1;Name=FBgn0029958.1;Parent=FBgn0029958.1.mrna1;Target=FBgn0029958.1 1 129 +
Chr1	stalkie_big_nohaplotig	CDS	129033679	129033990	100	+	0	ID=FBgn0029958.1.mrna1.cds2;Name=FBgn0029958.1;Parent=FBgn0029958.1.mrna1;Target=FBgn0029958.1 130 441 +
Chr1	stalkie_big_nohaplotig	CDS	129034057	129034246	100	+	0	ID=FBgn0029958.1.mrna1.cds3;Name=FBgn0029958.1;Parent=FBgn0029958.1.mrna1;Target=FBgn0029958.1 442 631 +
Chr1	stalkie_big_nohaplotig	CDS	129034304	129034871	98	+	1	ID=FBgn0029958.1.mrna1.cds4;Name=FBgn0029958.1;Parent=FBgn0029958.1.mrna1;Target=FBgn0029958.1 632 1199 +
Chr1	stalkie_big_nohaplotig	CDS	129034936	129035146	100	+	2	ID=FBgn0029958.1.mrna1.cds5;Name=FBgn0029958.1;Parent=FBgn0029958.1.mrna1;Target=FBgn0029958.1 1200 1410 +
Chr1	stalkie_big_nohaplotig	mRNA	129010758	129013964	.	-	.	ID=FBgn0030701.1.mrna1;Name=FBgn0030701.1;Parent=FBgn0030701.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=3000;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	129013587	129013964	100	-	.	ID=FBgn0030701.1.mrna1.exon1;Name=FBgn0030701.1;Parent=FBgn0030701.1.mrna1;Target=FBgn0030701.1 1 378 +
Chr1	stalkie_big_nohaplotig	exon	129012587	129013501	99	-	.	ID=FBgn0030701.1.mrna1.exon2;Name=FBgn0030701.1;Parent=FBgn0030701.1.mrna1;Target=FBgn0030701.1 379 1293 +
Chr1	stalkie_big_nohaplotig	exon	129010955	129012526	99	-	.	ID=FBgn0030701.1.mrna1.exon3;Name=FBgn0030701.1;Parent=FBgn0030701.1.mrna1;Target=FBgn0030701.1 1294 2865 +
Chr1	stalkie_big_nohaplotig	exon	129010758	129010895	100	-	.	ID=FBgn0030701.1.mrna1.exon4;Name=FBgn0030701.1;Parent=FBgn0030701.1.mrna1;Target=FBgn0030701.1 2866 3003 +
Chr1	stalkie_big_nohaplotig	CDS	129013587	129013964	100	-	0	ID=FBgn0030701.1.mrna1.cds1;Name=FBgn0030701.1;Parent=FBgn0030701.1.mrna1;Target=FBgn0030701.1 1 378 +
Chr1	stalkie_big_nohaplotig	CDS	129012587	129013501	99	-	0	ID=FBgn0030701.1.mrna1.cds2;Name=FBgn0030701.1;Parent=FBgn0030701.1.mrna1;Target=FBgn0030701.1 379 1293 +
Chr1	stalkie_big_nohaplotig	CDS	129010955	129012526	99	-	0	ID=FBgn0030701.1.mrna1.cds3;Name=FBgn0030701.1;Parent=FBgn0030701.1.mrna1;Target=FBgn0030701.1 1294 2865 +
Chr1	stalkie_big_nohaplotig	CDS	129010758	129010895	100	-	0	ID=FBgn0030701.1.mrna1.cds4;Name=FBgn0030701.1;Parent=FBgn0030701.1.mrna1;Target=FBgn0030701.1 2866 3003 +
Chr2	stalkie_big_nohaplotig	mRNA	44328618	44423136	.	-	.	ID=FBgn0004795.1.mrna1;Name=FBgn0004795.1;Parent=FBgn0004795.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=2717;mismatches=4;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	44423059	44423136	100	-	.	ID=FBgn0004795.1.mrna1.exon1;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 1 78 +
Chr2	stalkie_big_nohaplotig	exon	44394949	44395145	100	-	.	ID=FBgn0004795.1.mrna1.exon2;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 79 275 +
Chr2	stalkie_big_nohaplotig	exon	44394734	44394881	100	-	.	ID=FBgn0004795.1.mrna1.exon3;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 276 423 +
Chr2	stalkie_big_nohaplotig	exon	44394345	44394609	100	-	.	ID=FBgn0004795.1.mrna1.exon4;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 424 688 +
Chr2	stalkie_big_nohaplotig	exon	44391812	44391912	100	-	.	ID=FBgn0004795.1.mrna1.exon5;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 689 789 +
Chr2	stalkie_big_nohaplotig	exon	44366515	44366587	100	-	.	ID=FBgn0004795.1.mrna1.exon6;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 790 862 +
Chr2	stalkie_big_nohaplotig	exon	44350252	44350435	98	-	.	ID=FBgn0004795.1.mrna1.exon7;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 863 1046 +
Chr2	stalkie_big_nohaplotig	exon	44334177	44334324	99	-	.	ID=FBgn0004795.1.mrna1.exon8;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 1047 1194 +
Chr2	stalkie_big_nohaplotig	exon	44333595	44334073	100	-	.	ID=FBgn0004795.1.mrna1.exon9;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 1195 1673 +
Chr2	stalkie_big_nohaplotig	exon	44331192	44331315	100	-	.	ID=FBgn0004795.1.mrna1.exon10;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 1674 1797 +
Chr2	stalkie_big_nohaplotig	exon	44329127	44329610	100	-	.	ID=FBgn0004795.1.mrna1.exon11;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 1798 2281 +
Chr2	stalkie_big_nohaplotig	exon	44328618	44329057	99	-	.	ID=FBgn0004795.1.mrna1.exon12;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 2282 2721 +
Chr2	stalkie_big_nohaplotig	CDS	44423059	44423136	100	-	0	ID=FBgn0004795.1.mrna1.cds1;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 1 78 +
Chr2	stalkie_big_nohaplotig	CDS	44394949	44395145	100	-	0	ID=FBgn0004795.1.mrna1.cds2;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 79 275 +
Chr2	stalkie_big_nohaplotig	CDS	44394734	44394881	100	-	2	ID=FBgn0004795.1.mrna1.cds3;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 276 423 +
Chr2	stalkie_big_nohaplotig	CDS	44394345	44394609	100	-	0	ID=FBgn0004795.1.mrna1.cds4;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 424 688 +
Chr2	stalkie_big_nohaplotig	CDS	44391812	44391912	100	-	1	ID=FBgn0004795.1.mrna1.cds5;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 689 789 +
Chr2	stalkie_big_nohaplotig	CDS	44366515	44366587	100	-	0	ID=FBgn0004795.1.mrna1.cds6;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 790 862 +
Chr2	stalkie_big_nohaplotig	CDS	44350252	44350435	98	-	1	ID=FBgn0004795.1.mrna1.cds7;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 863 1046 +
Chr2	stalkie_big_nohaplotig	CDS	44334177	44334324	99	-	2	ID=FBgn0004795.1.mrna1.cds8;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 1047 1194 +
Chr2	stalkie_big_nohaplotig	CDS	44333595	44334073	100	-	0	ID=FBgn0004795.1.mrna1.cds9;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 1195 1673 +
Chr2	stalkie_big_nohaplotig	CDS	44331192	44331315	100	-	2	ID=FBgn0004795.1.mrna1.cds10;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 1674 1797 +
Chr2	stalkie_big_nohaplotig	CDS	44329127	44329610	100	-	0	ID=FBgn0004795.1.mrna1.cds11;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 1798 2281 +
Chr2	stalkie_big_nohaplotig	CDS	44328618	44329057	99	-	1	ID=FBgn0004795.1.mrna1.cds12;Name=FBgn0004795.1;Parent=FBgn0004795.1.mrna1;Target=FBgn0004795.1 2282 2721 +
Chr2	stalkie_big_nohaplotig	mRNA	59976240	59983520	.	+	.	ID=FBgn0033107.1.mrna1;Name=FBgn0033107.1;Parent=FBgn0033107.1.path1;Dir=sensecoverage=100.0;identity=99.1;matches=2541;mismatches=21;indels=3;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	59976240	59976346	97	+	.	ID=FBgn0033107.1.mrna1.exon1;Name=FBgn0033107.1;Parent=FBgn0033107.1.mrna1;Target=FBgn0033107.1 1 104 +
Chr2	stalkie_big_nohaplotig	exon	59976413	59976753	100	+	.	ID=FBgn0033107.1.mrna1.exon2;Name=FBgn0033107.1;Parent=FBgn0033107.1.mrna1;Target=FBgn0033107.1 105 445 +
Chr2	stalkie_big_nohaplotig	exon	59976812	59977000	100	+	.	ID=FBgn0033107.1.mrna1.exon3;Name=FBgn0033107.1;Parent=FBgn0033107.1.mrna1;Target=FBgn0033107.1 446 634 +
Chr2	stalkie_big_nohaplotig	exon	59981448	59983052	98	+	.	ID=FBgn0033107.1.mrna1.exon4;Name=FBgn0033107.1;Parent=FBgn0033107.1.mrna1;Target=FBgn0033107.1 635 2239 +
Chr2	stalkie_big_nohaplotig	exon	59983128	59983240	99	+	.	ID=FBgn0033107.1.mrna1.exon5;Name=FBgn0033107.1;Parent=FBgn0033107.1.mrna1;Target=FBgn0033107.1 2240 2352 +
Chr2	stalkie_big_nohaplotig	exon	59983311	59983520	99	+	.	ID=FBgn0033107.1.mrna1.exon6;Name=FBgn0033107.1;Parent=FBgn0033107.1.mrna1;Target=FBgn0033107.1 2353 2562 +
Chr2	stalkie_big_nohaplotig	CDS	59976240	59976346	97	+	0	ID=FBgn0033107.1.mrna1.cds1;Name=FBgn0033107.1;Parent=FBgn0033107.1.mrna1;Target=FBgn0033107.1 1 104 +
Chr2	stalkie_big_nohaplotig	CDS	59976413	59976753	100	+	2	ID=FBgn0033107.1.mrna1.cds2;Name=FBgn0033107.1;Parent=FBgn0033107.1.mrna1;Target=FBgn0033107.1 105 445 +
Chr2	stalkie_big_nohaplotig	CDS	59976812	59977000	100	+	1	ID=FBgn0033107.1.mrna1.cds3;Name=FBgn0033107.1;Parent=FBgn0033107.1.mrna1;Target=FBgn0033107.1 446 634 +
Chr2	stalkie_big_nohaplotig	CDS	59981448	59983052	98	+	1	ID=FBgn0033107.1.mrna1.cds4;Name=FBgn0033107.1;Parent=FBgn0033107.1.mrna1;Target=FBgn0033107.1 635 2239 +
Chr2	stalkie_big_nohaplotig	CDS	59983128	59983240	99	+	1	ID=FBgn0033107.1.mrna1.cds5;Name=FBgn0033107.1;Parent=FBgn0033107.1.mrna1;Target=FBgn0033107.1 2240 2352 +
Chr2	stalkie_big_nohaplotig	CDS	59983311	59983520	99	+	0	ID=FBgn0033107.1.mrna1.cds6;Name=FBgn0033107.1;Parent=FBgn0033107.1.mrna1;Target=FBgn0033107.1 2353 2562 +
Chr2	stalkie_big_nohaplotig	mRNA	7408899	7417213	.	+	.	ID=FBgn0003891.1.mrna1;Name=FBgn0003891.1;Parent=FBgn0003891.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=7006;mismatches=13;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	7408899	7409387	100	+	.	ID=FBgn0003891.1.mrna1.exon1;Name=FBgn0003891.1;Parent=FBgn0003891.1.mrna1;Target=FBgn0003891.1 1 489 +
Chr2	stalkie_big_nohaplotig	exon	7409539	7409697	100	+	.	ID=FBgn0003891.1.mrna1.exon2;Name=FBgn0003891.1;Parent=FBgn0003891.1.mrna1;Target=FBgn0003891.1 490 648 +
Chr2	stalkie_big_nohaplotig	exon	7409770	7410136	100	+	.	ID=FBgn0003891.1.mrna1.exon3;Name=FBgn0003891.1;Parent=FBgn0003891.1.mrna1;Target=FBgn0003891.1 649 1015 +
Chr2	stalkie_big_nohaplotig	exon	7410205	7410971	99	+	.	ID=FBgn0003891.1.mrna1.exon4;Name=FBgn0003891.1;Parent=FBgn0003891.1.mrna1;Target=FBgn0003891.1 1016 1782 +
Chr2	stalkie_big_nohaplotig	exon	7411024	7412084	100	+	.	ID=FBgn0003891.1.mrna1.exon5;Name=FBgn0003891.1;Parent=FBgn0003891.1.mrna1;Target=FBgn0003891.1 1783 2843 +
Chr2	stalkie_big_nohaplotig	exon	7412144	7412853	99	+	.	ID=FBgn0003891.1.mrna1.exon6;Name=FBgn0003891.1;Parent=FBgn0003891.1.mrna1;Target=FBgn0003891.1 2844 3553 +
Chr2	stalkie_big_nohaplotig	exon	7412927	7413161	100	+	.	ID=FBgn0003891.1.mrna1.exon7;Name=FBgn0003891.1;Parent=FBgn0003891.1.mrna1;Target=FBgn0003891.1 3554 3788 +
Chr2	stalkie_big_nohaplotig	exon	7413222	7413421	99	+	.	ID=FBgn0003891.1.mrna1.exon8;Name=FBgn0003891.1;Parent=FBgn0003891.1.mrna1;Target=FBgn0003891.1 3789 3988 +
Chr2	stalkie_big_nohaplotig	exon	7414183	7417213	99	+	.	ID=FBgn0003891.1.mrna1.exon9;Name=FBgn0003891.1;Parent=FBgn0003891.1.mrna1;Target=FBgn0003891.1 3989 7020 +
Chr2	stalkie_big_nohaplotig	CDS	7408899	7409387	100	+	0	ID=FBgn0003891.1.mrna1.cds1;Name=FBgn0003891.1;Parent=FBgn0003891.1.mrna1;Target=FBgn0003891.1 1 489 +
Chr2	stalkie_big_nohaplotig	CDS	7409539	7409697	100	+	0	ID=FBgn0003891.1.mrna1.cds2;Name=FBgn0003891.1;Parent=FBgn0003891.1.mrna1;Target=FBgn0003891.1 490 648 +
Chr2	stalkie_big_nohaplotig	CDS	7409770	7410136	100	+	0	ID=FBgn0003891.1.mrna1.cds3;Name=FBgn0003891.1;Parent=FBgn0003891.1.mrna1;Target=FBgn0003891.1 649 1015 +
Chr2	stalkie_big_nohaplotig	CDS	7410205	7410971	99	+	1	ID=FBgn0003891.1.mrna1.cds4;Name=FBgn0003891.1;Parent=FBgn0003891.1.mrna1;Target=FBgn0003891.1 1016 1782 +
Chr2	stalkie_big_nohaplotig	CDS	7411024	7412084	100	+	0	ID=FBgn0003891.1.mrna1.cds5;Name=FBgn0003891.1;Parent=FBgn0003891.1.mrna1;Target=FBgn0003891.1 1783 2843 +
Chr2	stalkie_big_nohaplotig	CDS	7412144	7412853	99	+	2	ID=FBgn0003891.1.mrna1.cds6;Name=FBgn0003891.1;Parent=FBgn0003891.1.mrna1;Target=FBgn0003891.1 2844 3553 +
Chr2	stalkie_big_nohaplotig	CDS	7412927	7413161	100	+	1	ID=FBgn0003891.1.mrna1.cds7;Name=FBgn0003891.1;Parent=FBgn0003891.1.mrna1;Target=FBgn0003891.1 3554 3788 +
Chr2	stalkie_big_nohaplotig	CDS	7413222	7413421	99	+	2	ID=FBgn0003891.1.mrna1.cds8;Name=FBgn0003891.1;Parent=FBgn0003891.1.mrna1;Target=FBgn0003891.1 3789 3988 +
Chr2	stalkie_big_nohaplotig	CDS	7414183	7417213	99	+	1	ID=FBgn0003891.1.mrna1.cds9;Name=FBgn0003891.1;Parent=FBgn0003891.1.mrna1;Target=FBgn0003891.1 3989 7020 +
Chr2	stalkie_big_nohaplotig	mRNA	7392841	7400115	.	+	.	ID=FBgn0033889.1.mrna1;Name=FBgn0033889.1;Parent=FBgn0033889.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=3483;mismatches=12;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	7392841	7393013	100	+	.	ID=FBgn0033889.1.mrna1.exon1;Name=FBgn0033889.1;Parent=FBgn0033889.1.mrna1;Target=FBgn0033889.1 1 173 +
Chr2	stalkie_big_nohaplotig	exon	7393089	7393374	100	+	.	ID=FBgn0033889.1.mrna1.exon2;Name=FBgn0033889.1;Parent=FBgn0033889.1.mrna1;Target=FBgn0033889.1 174 459 +
Chr2	stalkie_big_nohaplotig	exon	7393467	7393528	100	+	.	ID=FBgn0033889.1.mrna1.exon3;Name=FBgn0033889.1;Parent=FBgn0033889.1.mrna1;Target=FBgn0033889.1 460 521 +
Chr2	stalkie_big_nohaplotig	exon	7393593	7393866	100	+	.	ID=FBgn0033889.1.mrna1.exon4;Name=FBgn0033889.1;Parent=FBgn0033889.1.mrna1;Target=FBgn0033889.1 522 795 +
Chr2	stalkie_big_nohaplotig	exon	7395425	7395819	100	+	.	ID=FBgn0033889.1.mrna1.exon5;Name=FBgn0033889.1;Parent=FBgn0033889.1.mrna1;Target=FBgn0033889.1 796 1190 +
Chr2	stalkie_big_nohaplotig	exon	7395885	7396000	100	+	.	ID=FBgn0033889.1.mrna1.exon6;Name=FBgn0033889.1;Parent=FBgn0033889.1.mrna1;Target=FBgn0033889.1 1191 1306 +
Chr2	stalkie_big_nohaplotig	exon	7396062	7396763	99	+	.	ID=FBgn0033889.1.mrna1.exon7;Name=FBgn0033889.1;Parent=FBgn0033889.1.mrna1;Target=FBgn0033889.1 1307 2008 +
Chr2	stalkie_big_nohaplotig	exon	7396833	7396938	98	+	.	ID=FBgn0033889.1.mrna1.exon8;Name=FBgn0033889.1;Parent=FBgn0033889.1.mrna1;Target=FBgn0033889.1 2009 2114 +
Chr2	stalkie_big_nohaplotig	exon	7398474	7398750	100	+	.	ID=FBgn0033889.1.mrna1.exon9;Name=FBgn0033889.1;Parent=FBgn0033889.1.mrna1;Target=FBgn0033889.1 2115 2391 +
Chr2	stalkie_big_nohaplotig	exon	7398952	7399144	99	+	.	ID=FBgn0033889.1.mrna1.exon10;Name=FBgn0033889.1;Parent=FBgn0033889.1.mrna1;Target=FBgn0033889.1 2392 2584 +
Chr2	stalkie_big_nohaplotig	exon	7399205	7400115	99	+	.	ID=FBgn0033889.1.mrna1.exon11;Name=FBgn0033889.1;Parent=FBgn0033889.1.mrna1;Target=FBgn0033889.1 2585 3495 +
Chr2	stalkie_big_nohaplotig	CDS	7392841	7393013	100	+	0	ID=FBgn0033889.1.mrna1.cds1;Name=FBgn0033889.1;Parent=FBgn0033889.1.mrna1;Target=FBgn0033889.1 1 173 +
Chr2	stalkie_big_nohaplotig	CDS	7393089	7393374	100	+	2	ID=FBgn0033889.1.mrna1.cds2;Name=FBgn0033889.1;Parent=FBgn0033889.1.mrna1;Target=FBgn0033889.1 174 459 +
Chr2	stalkie_big_nohaplotig	CDS	7393467	7393528	100	+	0	ID=FBgn0033889.1.mrna1.cds3;Name=FBgn0033889.1;Parent=FBgn0033889.1.mrna1;Target=FBgn0033889.1 460 521 +
Chr2	stalkie_big_nohaplotig	CDS	7393593	7393866	100	+	2	ID=FBgn0033889.1.mrna1.cds4;Name=FBgn0033889.1;Parent=FBgn0033889.1.mrna1;Target=FBgn0033889.1 522 795 +
Chr2	stalkie_big_nohaplotig	CDS	7395425	7395819	100	+	0	ID=FBgn0033889.1.mrna1.cds5;Name=FBgn0033889.1;Parent=FBgn0033889.1.mrna1;Target=FBgn0033889.1 796 1190 +
Chr2	stalkie_big_nohaplotig	CDS	7395885	7396000	100	+	2	ID=FBgn0033889.1.mrna1.cds6;Name=FBgn0033889.1;Parent=FBgn0033889.1.mrna1;Target=FBgn0033889.1 1191 1306 +
Chr2	stalkie_big_nohaplotig	CDS	7396062	7396763	99	+	1	ID=FBgn0033889.1.mrna1.cds7;Name=FBgn0033889.1;Parent=FBgn0033889.1.mrna1;Target=FBgn0033889.1 1307 2008 +
Chr2	stalkie_big_nohaplotig	CDS	7396833	7396938	98	+	1	ID=FBgn0033889.1.mrna1.cds8;Name=FBgn0033889.1;Parent=FBgn0033889.1.mrna1;Target=FBgn0033889.1 2009 2114 +
Chr2	stalkie_big_nohaplotig	CDS	7398474	7398750	100	+	2	ID=FBgn0033889.1.mrna1.cds9;Name=FBgn0033889.1;Parent=FBgn0033889.1.mrna1;Target=FBgn0033889.1 2115 2391 +
Chr2	stalkie_big_nohaplotig	CDS	7398952	7399144	99	+	0	ID=FBgn0033889.1.mrna1.cds10;Name=FBgn0033889.1;Parent=FBgn0033889.1.mrna1;Target=FBgn0033889.1 2392 2584 +
Chr2	stalkie_big_nohaplotig	CDS	7399205	7400115	99	+	1	ID=FBgn0033889.1.mrna1.cds11;Name=FBgn0033889.1;Parent=FBgn0033889.1.mrna1;Target=FBgn0033889.1 2585 3495 +
Chr1	stalkie_big_nohaplotig	mRNA	111899197	111901622	.	-	.	ID=FBgn0030992.5.mrna1;Name=FBgn0030992.5;Parent=FBgn0030992.5.path1;Dir=sensecoverage=100.0;identity=99.8;matches=946;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	111901481	111901622	100	-	.	ID=FBgn0030992.5.mrna1.exon1;Name=FBgn0030992.5;Parent=FBgn0030992.5.mrna1;Target=FBgn0030992.5 1 142 +
Chr1	stalkie_big_nohaplotig	exon	111899629	111900145	99	-	.	ID=FBgn0030992.5.mrna1.exon2;Name=FBgn0030992.5;Parent=FBgn0030992.5.mrna1;Target=FBgn0030992.5 143 659 +
Chr1	stalkie_big_nohaplotig	exon	111899380	111899545	99	-	.	ID=FBgn0030992.5.mrna1.exon3;Name=FBgn0030992.5;Parent=FBgn0030992.5.mrna1;Target=FBgn0030992.5 660 825 +
Chr1	stalkie_big_nohaplotig	exon	111899197	111899319	100	-	.	ID=FBgn0030992.5.mrna1.exon4;Name=FBgn0030992.5;Parent=FBgn0030992.5.mrna1;Target=FBgn0030992.5 826 948 +
Chr1	stalkie_big_nohaplotig	CDS	111901481	111901622	100	-	0	ID=FBgn0030992.5.mrna1.cds1;Name=FBgn0030992.5;Parent=FBgn0030992.5.mrna1;Target=FBgn0030992.5 1 142 +
Chr1	stalkie_big_nohaplotig	CDS	111899629	111900145	99	-	1	ID=FBgn0030992.5.mrna1.cds2;Name=FBgn0030992.5;Parent=FBgn0030992.5.mrna1;Target=FBgn0030992.5 143 659 +
Chr1	stalkie_big_nohaplotig	CDS	111899380	111899545	99	-	2	ID=FBgn0030992.5.mrna1.cds3;Name=FBgn0030992.5;Parent=FBgn0030992.5.mrna1;Target=FBgn0030992.5 660 825 +
Chr1	stalkie_big_nohaplotig	CDS	111899197	111899319	100	-	0	ID=FBgn0030992.5.mrna1.cds4;Name=FBgn0030992.5;Parent=FBgn0030992.5.mrna1;Target=FBgn0030992.5 826 948 +
Chr2	stalkie_big_nohaplotig	mRNA	22356233	22357100	.	+	.	ID=FBgn0038760.mrna1;Name=FBgn0038760;Parent=FBgn0038760.path1;Dir=sensecoverage=100.0;identity=99.6;matches=789;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	22356233	22356887	99	+	.	ID=FBgn0038760.mrna1.exon1;Name=FBgn0038760;Parent=FBgn0038760.mrna1;Target=FBgn0038760 1 655 +
Chr2	stalkie_big_nohaplotig	exon	22356964	22357100	100	+	.	ID=FBgn0038760.mrna1.exon2;Name=FBgn0038760;Parent=FBgn0038760.mrna1;Target=FBgn0038760 656 792 +
Chr2	stalkie_big_nohaplotig	CDS	22356233	22356887	99	+	0	ID=FBgn0038760.mrna1.cds1;Name=FBgn0038760;Parent=FBgn0038760.mrna1;Target=FBgn0038760 1 655 +
Chr2	stalkie_big_nohaplotig	CDS	22356964	22357100	100	+	1	ID=FBgn0038760.mrna1.cds2;Name=FBgn0038760;Parent=FBgn0038760.mrna1;Target=FBgn0038760 656 792 +
Chr2	stalkie_big_nohaplotig	mRNA	22436289	22457508	.	+	.	ID=FBgn0262867.1.mrna1;Name=FBgn0262867.1;Parent=FBgn0262867.1.path1;Dir=sensecoverage=99.2;identity=99.8;matches=3040;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	22436289	22436419	100	+	.	ID=FBgn0262867.1.mrna1.exon1;Name=FBgn0262867.1;Parent=FBgn0262867.1.mrna1;Target=FBgn0262867.1 25 155 +
Chr2	stalkie_big_nohaplotig	exon	22437513	22437658	99	+	.	ID=FBgn0262867.1.mrna1.exon2;Name=FBgn0262867.1;Parent=FBgn0262867.1.mrna1;Target=FBgn0262867.1 156 301 +
Chr2	stalkie_big_nohaplotig	exon	22449539	22449753	100	+	.	ID=FBgn0262867.1.mrna1.exon3;Name=FBgn0262867.1;Parent=FBgn0262867.1.mrna1;Target=FBgn0262867.1 302 516 +
Chr2	stalkie_big_nohaplotig	exon	22449825	22450006	98	+	.	ID=FBgn0262867.1.mrna1.exon4;Name=FBgn0262867.1;Parent=FBgn0262867.1.mrna1;Target=FBgn0262867.1 517 698 +
Chr2	stalkie_big_nohaplotig	exon	22451188	22451367	100	+	.	ID=FBgn0262867.1.mrna1.exon5;Name=FBgn0262867.1;Parent=FBgn0262867.1.mrna1;Target=FBgn0262867.1 699 878 +
Chr2	stalkie_big_nohaplotig	exon	22451597	22451760	100	+	.	ID=FBgn0262867.1.mrna1.exon6;Name=FBgn0262867.1;Parent=FBgn0262867.1.mrna1;Target=FBgn0262867.1 879 1042 +
Chr2	stalkie_big_nohaplotig	exon	22453421	22453759	100	+	.	ID=FBgn0262867.1.mrna1.exon7;Name=FBgn0262867.1;Parent=FBgn0262867.1.mrna1;Target=FBgn0262867.1 1043 1381 +
Chr2	stalkie_big_nohaplotig	exon	22455753	22456066	100	+	.	ID=FBgn0262867.1.mrna1.exon8;Name=FBgn0262867.1;Parent=FBgn0262867.1.mrna1;Target=FBgn0262867.1 1382 1695 +
Chr2	stalkie_big_nohaplotig	exon	22456135	22457508	99	+	.	ID=FBgn0262867.1.mrna1.exon9;Name=FBgn0262867.1;Parent=FBgn0262867.1.mrna1;Target=FBgn0262867.1 1696 3069 +
Chr2	stalkie_big_nohaplotig	CDS	22436289	22436419	100	+	0	ID=FBgn0262867.1.mrna1.cds1;Name=FBgn0262867.1;Parent=FBgn0262867.1.mrna1;Target=FBgn0262867.1 25 155 +
Chr2	stalkie_big_nohaplotig	CDS	22437513	22437658	99	+	2	ID=FBgn0262867.1.mrna1.cds2;Name=FBgn0262867.1;Parent=FBgn0262867.1.mrna1;Target=FBgn0262867.1 156 301 +
Chr2	stalkie_big_nohaplotig	CDS	22449539	22449753	100	+	1	ID=FBgn0262867.1.mrna1.cds3;Name=FBgn0262867.1;Parent=FBgn0262867.1.mrna1;Target=FBgn0262867.1 302 516 +
Chr2	stalkie_big_nohaplotig	CDS	22449825	22450006	98	+	0	ID=FBgn0262867.1.mrna1.cds4;Name=FBgn0262867.1;Parent=FBgn0262867.1.mrna1;Target=FBgn0262867.1 517 698 +
Chr2	stalkie_big_nohaplotig	CDS	22451188	22451367	100	+	2	ID=FBgn0262867.1.mrna1.cds5;Name=FBgn0262867.1;Parent=FBgn0262867.1.mrna1;Target=FBgn0262867.1 699 878 +
Chr2	stalkie_big_nohaplotig	CDS	22451597	22451760	100	+	2	ID=FBgn0262867.1.mrna1.cds6;Name=FBgn0262867.1;Parent=FBgn0262867.1.mrna1;Target=FBgn0262867.1 879 1042 +
Chr2	stalkie_big_nohaplotig	CDS	22453421	22453759	100	+	1	ID=FBgn0262867.1.mrna1.cds7;Name=FBgn0262867.1;Parent=FBgn0262867.1.mrna1;Target=FBgn0262867.1 1043 1381 +
Chr2	stalkie_big_nohaplotig	CDS	22455753	22456066	100	+	1	ID=FBgn0262867.1.mrna1.cds8;Name=FBgn0262867.1;Parent=FBgn0262867.1.mrna1;Target=FBgn0262867.1 1382 1695 +
Chr2	stalkie_big_nohaplotig	CDS	22456135	22457508	99	+	0	ID=FBgn0262867.1.mrna1.cds9;Name=FBgn0262867.1;Parent=FBgn0262867.1.mrna1;Target=FBgn0262867.1 1696 3069 +
ChrX	stalkie_big_nohaplotig	mRNA	55367244	55369450	.	-	.	ID=FBgn0027929.1.mrna1;Name=FBgn0027929.1;Parent=FBgn0027929.1.path1;Dir=sensecoverage=100.0;identity=99.0;matches=1191;mismatches=12;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	55369260	55369450	100	-	.	ID=FBgn0027929.1.mrna1.exon1;Name=FBgn0027929.1;Parent=FBgn0027929.1.mrna1;Target=FBgn0027929.1 1 191 +
ChrX	stalkie_big_nohaplotig	exon	55368640	55369200	98	-	.	ID=FBgn0027929.1.mrna1.exon2;Name=FBgn0027929.1;Parent=FBgn0027929.1.mrna1;Target=FBgn0027929.1 192 752 +
ChrX	stalkie_big_nohaplotig	exon	55367563	55367760	100	-	.	ID=FBgn0027929.1.mrna1.exon3;Name=FBgn0027929.1;Parent=FBgn0027929.1.mrna1;Target=FBgn0027929.1 753 950 +
ChrX	stalkie_big_nohaplotig	exon	55367244	55367496	99	-	.	ID=FBgn0027929.1.mrna1.exon4;Name=FBgn0027929.1;Parent=FBgn0027929.1.mrna1;Target=FBgn0027929.1 951 1203 +
ChrX	stalkie_big_nohaplotig	CDS	55369260	55369450	100	-	0	ID=FBgn0027929.1.mrna1.cds1;Name=FBgn0027929.1;Parent=FBgn0027929.1.mrna1;Target=FBgn0027929.1 1 191 +
ChrX	stalkie_big_nohaplotig	CDS	55368640	55369200	98	-	2	ID=FBgn0027929.1.mrna1.cds2;Name=FBgn0027929.1;Parent=FBgn0027929.1.mrna1;Target=FBgn0027929.1 192 752 +
ChrX	stalkie_big_nohaplotig	CDS	55367563	55367760	100	-	2	ID=FBgn0027929.1.mrna1.cds3;Name=FBgn0027929.1;Parent=FBgn0027929.1.mrna1;Target=FBgn0027929.1 753 950 +
ChrX	stalkie_big_nohaplotig	CDS	55367244	55367496	99	-	2	ID=FBgn0027929.1.mrna1.cds4;Name=FBgn0027929.1;Parent=FBgn0027929.1.mrna1;Target=FBgn0027929.1 951 1203 +
ChrX	stalkie_big_nohaplotig	mRNA	55294590	55297429	.	-	.	ID=ORF1869.mrna1;Name=ORF1869;Parent=ORF1869.path1;Dir=sensecoverage=100.0;identity=100.0;matches=975;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	55296511	55297429	100	-	.	ID=ORF1869.mrna1.exon1;Name=ORF1869;Parent=ORF1869.mrna1;Target=ORF1869 1 919 +
ChrX	stalkie_big_nohaplotig	exon	55294590	55294645	100	-	.	ID=ORF1869.mrna1.exon2;Name=ORF1869;Parent=ORF1869.mrna1;Target=ORF1869 920 975 +
ChrX	stalkie_big_nohaplotig	CDS	55296511	55297429	100	-	0	ID=ORF1869.mrna1.cds1;Name=ORF1869;Parent=ORF1869.mrna1;Target=ORF1869 1 919 +
ChrX	stalkie_big_nohaplotig	CDS	55294590	55294645	100	-	1	ID=ORF1869.mrna1.cds2;Name=ORF1869;Parent=ORF1869.mrna1;Target=ORF1869 920 975 +
ChrX	stalkie_big_nohaplotig	mRNA	49688750	49694674	.	+	.	ID=FBgn0032816.1.mrna1;Name=FBgn0032816.1;Parent=FBgn0032816.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=468;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	49688750	49688825	100	+	.	ID=FBgn0032816.1.mrna1.exon1;Name=FBgn0032816.1;Parent=FBgn0032816.1.mrna1;Target=FBgn0032816.1 1 76 +
ChrX	stalkie_big_nohaplotig	exon	49694218	49694531	100	+	.	ID=FBgn0032816.1.mrna1.exon2;Name=FBgn0032816.1;Parent=FBgn0032816.1.mrna1;Target=FBgn0032816.1 77 390 +
ChrX	stalkie_big_nohaplotig	exon	49694597	49694674	100	+	.	ID=FBgn0032816.1.mrna1.exon3;Name=FBgn0032816.1;Parent=FBgn0032816.1.mrna1;Target=FBgn0032816.1 391 468 +
ChrX	stalkie_big_nohaplotig	CDS	49688750	49688825	100	+	0	ID=FBgn0032816.1.mrna1.cds1;Name=FBgn0032816.1;Parent=FBgn0032816.1.mrna1;Target=FBgn0032816.1 1 76 +
ChrX	stalkie_big_nohaplotig	CDS	49694218	49694531	100	+	1	ID=FBgn0032816.1.mrna1.cds2;Name=FBgn0032816.1;Parent=FBgn0032816.1.mrna1;Target=FBgn0032816.1 77 390 +
ChrX	stalkie_big_nohaplotig	CDS	49694597	49694674	100	+	0	ID=FBgn0032816.1.mrna1.cds3;Name=FBgn0032816.1;Parent=FBgn0032816.1.mrna1;Target=FBgn0032816.1 391 468 +
ChrX	stalkie_big_nohaplotig	mRNA	50011367	50012749	.	-	.	ID=ORF1011.mrna1;Name=ORF1011;Parent=ORF1011.path1;Dir=sensecoverage=98.6;identity=99.9;matches=1262;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	50012620	50012749	100	-	.	ID=ORF1011.mrna1.exon1;Name=ORF1011;Parent=ORF1011.mrna1;Target=ORF1011 19 148 +
ChrX	stalkie_big_nohaplotig	exon	50011367	50012499	99	-	.	ID=ORF1011.mrna1.exon2;Name=ORF1011;Parent=ORF1011.mrna1;Target=ORF1011 149 1281 +
ChrX	stalkie_big_nohaplotig	CDS	50012620	50012749	100	-	0	ID=ORF1011.mrna1.cds1;Name=ORF1011;Parent=ORF1011.mrna1;Target=ORF1011 19 148 +
ChrX	stalkie_big_nohaplotig	CDS	50011367	50012499	99	-	1	ID=ORF1011.mrna1.cds2;Name=ORF1011;Parent=ORF1011.mrna1;Target=ORF1011 149 1281 +
Chr1	stalkie_big_nohaplotig	mRNA	152554403	152555576	.	-	.	ID=FBgn0034727.1.mrna1;Name=FBgn0034727.1;Parent=FBgn0034727.1.path1;Dir=indeterminatecoverage=99.6;identity=99.5;matches=1168;mismatches=6;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	152554403	152555576	99	-	.	ID=FBgn0034727.1.mrna1.exon1;Name=FBgn0034727.1;Parent=FBgn0034727.1.mrna1;Target=FBgn0034727.1 1179 6 .
Chr1	stalkie_big_nohaplotig	CDS	152554403	152555575	99	-	0	ID=FBgn0034727.1.mrna1.cds1;Name=FBgn0034727.1;Parent=FBgn0034727.1.mrna1;Target=FBgn0034727.1 1179 7 .
Chr2	stalkie_big_nohaplotig	mRNA	59200803	59201732	.	-	.	ID=ORF2047.mrna1;Name=ORF2047;Parent=ORF2047.path1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=916;mismatches=14;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	59200803	59201732	98	-	.	ID=ORF2047.mrna1.exon1;Name=ORF2047;Parent=ORF2047.mrna1;Target=ORF2047 930 1 .
Chr2	stalkie_big_nohaplotig	CDS	59200803	59201732	98	-	0	ID=ORF2047.mrna1.cds1;Name=ORF2047;Parent=ORF2047.mrna1;Target=ORF2047 930 1 .
ChrX	stalkie_big_nohaplotig	mRNA	4397542	4399316	.	-	.	ID=ORF947.mrna1;Name=ORF947;Parent=ORF947.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1332;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	4399273	4399316	100	-	.	ID=ORF947.mrna1.exon1;Name=ORF947;Parent=ORF947.mrna1;Target=ORF947 1 44 +
ChrX	stalkie_big_nohaplotig	exon	4397542	4398829	100	-	.	ID=ORF947.mrna1.exon2;Name=ORF947;Parent=ORF947.mrna1;Target=ORF947 45 1332 +
ChrX	stalkie_big_nohaplotig	CDS	4399273	4399316	100	-	0	ID=ORF947.mrna1.cds1;Name=ORF947;Parent=ORF947.mrna1;Target=ORF947 1 44 +
ChrX	stalkie_big_nohaplotig	CDS	4397542	4398829	100	-	2	ID=ORF947.mrna1.cds2;Name=ORF947;Parent=ORF947.mrna1;Target=ORF947 45 1332 +
Chr1	stalkie_big_nohaplotig	mRNA	33032878	33049174	.	-	.	ID=FBgn0259935.mrna1;Name=FBgn0259935;Parent=FBgn0259935.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1014;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	33048793	33049174	100	-	.	ID=FBgn0259935.mrna1.exon1;Name=FBgn0259935;Parent=FBgn0259935.mrna1;Target=FBgn0259935 1 382 +
Chr1	stalkie_big_nohaplotig	exon	33047677	33047784	99	-	.	ID=FBgn0259935.mrna1.exon2;Name=FBgn0259935;Parent=FBgn0259935.mrna1;Target=FBgn0259935 383 490 +
Chr1	stalkie_big_nohaplotig	exon	33038932	33039010	97	-	.	ID=FBgn0259935.mrna1.exon3;Name=FBgn0259935;Parent=FBgn0259935.mrna1;Target=FBgn0259935 491 569 +
Chr1	stalkie_big_nohaplotig	exon	33032878	33033325	100	-	.	ID=FBgn0259935.mrna1.exon4;Name=FBgn0259935;Parent=FBgn0259935.mrna1;Target=FBgn0259935 570 1017 +
Chr1	stalkie_big_nohaplotig	CDS	33048793	33049174	100	-	0	ID=FBgn0259935.mrna1.cds1;Name=FBgn0259935;Parent=FBgn0259935.mrna1;Target=FBgn0259935 1 382 +
Chr1	stalkie_big_nohaplotig	CDS	33047677	33047784	99	-	1	ID=FBgn0259935.mrna1.cds2;Name=FBgn0259935;Parent=FBgn0259935.mrna1;Target=FBgn0259935 383 490 +
Chr1	stalkie_big_nohaplotig	CDS	33038932	33039010	97	-	1	ID=FBgn0259935.mrna1.cds3;Name=FBgn0259935;Parent=FBgn0259935.mrna1;Target=FBgn0259935 491 569 +
Chr1	stalkie_big_nohaplotig	CDS	33032878	33033325	100	-	2	ID=FBgn0259935.mrna1.cds4;Name=FBgn0259935;Parent=FBgn0259935.mrna1;Target=FBgn0259935 570 1017 +
Chr1	stalkie_big_nohaplotig	mRNA	159185702	159187087	.	-	.	ID=FBgn0029969.1.mrna1;Name=FBgn0029969.1;Parent=FBgn0029969.1.path1;Dir=sensecoverage=100.0;identity=99.1;matches=1257;mismatches=12;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	159186836	159187087	98	-	.	ID=FBgn0029969.1.mrna1.exon1;Name=FBgn0029969.1;Parent=FBgn0029969.1.mrna1;Target=FBgn0029969.1 1 252 +
Chr1	stalkie_big_nohaplotig	exon	159185702	159186718	99	-	.	ID=FBgn0029969.1.mrna1.exon2;Name=FBgn0029969.1;Parent=FBgn0029969.1.mrna1;Target=FBgn0029969.1 253 1269 +
Chr1	stalkie_big_nohaplotig	CDS	159186836	159187087	98	-	0	ID=FBgn0029969.1.mrna1.cds1;Name=FBgn0029969.1;Parent=FBgn0029969.1.mrna1;Target=FBgn0029969.1 1 252 +
Chr1	stalkie_big_nohaplotig	CDS	159185702	159186718	99	-	0	ID=FBgn0029969.1.mrna1.cds2;Name=FBgn0029969.1;Parent=FBgn0029969.1.mrna1;Target=FBgn0029969.1 253 1269 +
Chr1	stalkie_big_nohaplotig	mRNA	154350117	154351235	.	+	.	ID=FBgn0031483.1.mrna2;Name=FBgn0031483.1;Parent=FBgn0031483.1.path2;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1116;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	154350117	154351235	99	+	.	ID=FBgn0031483.1.mrna2.exon1;Name=FBgn0031483.1;Parent=FBgn0031483.1.mrna2;Target=FBgn0031483.1 1119 1 .
Chr1	stalkie_big_nohaplotig	CDS	154350117	154351235	99	+	0	ID=FBgn0031483.1.mrna2.cds1;Name=FBgn0031483.1;Parent=FBgn0031483.1.mrna2;Target=FBgn0031483.1 1119 1 .
Chr2	stalkie_big_nohaplotig	mRNA	74026057	74027175	.	-	.	ID=FBgn0031483.1.mrna3;Name=FBgn0031483.1;Parent=FBgn0031483.1.path3;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1116;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	74026057	74027175	99	-	.	ID=FBgn0031483.1.mrna3.exon1;Name=FBgn0031483.1;Parent=FBgn0031483.1.mrna3;Target=FBgn0031483.1 1119 1 .
Chr2	stalkie_big_nohaplotig	CDS	74026057	74027175	99	-	0	ID=FBgn0031483.1.mrna3.cds1;Name=FBgn0031483.1;Parent=FBgn0031483.1.mrna3;Target=FBgn0031483.1 1119 1 .
ChrX	stalkie_big_nohaplotig	mRNA	7376945	7378063	.	+	.	ID=FBgn0031483.1.mrna4;Name=FBgn0031483.1;Parent=FBgn0031483.1.path4;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1115;mismatches=4;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	7376945	7378063	99	+	.	ID=FBgn0031483.1.mrna4.exon1;Name=FBgn0031483.1;Parent=FBgn0031483.1.mrna4;Target=FBgn0031483.1 1119 1 .
ChrX	stalkie_big_nohaplotig	CDS	7377566	7378063	99	+	0	ID=FBgn0031483.1.mrna4.cds1;Name=FBgn0031483.1;Parent=FBgn0031483.1.mrna4;Target=FBgn0031483.1 1119 622 .
ChrX	stalkie_big_nohaplotig	mRNA	55315916	55317034	.	+	.	ID=FBgn0031483.1.mrna5;Name=FBgn0031483.1;Parent=FBgn0031483.1.path5;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1115;mismatches=4;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	55315916	55317034	99	+	.	ID=FBgn0031483.1.mrna5.exon1;Name=FBgn0031483.1;Parent=FBgn0031483.1.mrna5;Target=FBgn0031483.1 1119 1 .
ChrX	stalkie_big_nohaplotig	CDS	55315916	55317034	99	+	0	ID=FBgn0031483.1.mrna5.cds1;Name=FBgn0031483.1;Parent=FBgn0031483.1.mrna5;Target=FBgn0031483.1 1119 1 .
Chr2	stalkie_big_nohaplotig	mRNA	36909461	36910579	.	-	.	ID=FBgn0031483.1.mrna6;Name=FBgn0031483.1;Parent=FBgn0031483.1.path6;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1115;mismatches=4;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	36909461	36910579	99	-	.	ID=FBgn0031483.1.mrna6.exon1;Name=FBgn0031483.1;Parent=FBgn0031483.1.mrna6;Target=FBgn0031483.1 1119 1 .
Chr2	stalkie_big_nohaplotig	CDS	36909461	36910579	99	-	0	ID=FBgn0031483.1.mrna6.cds1;Name=FBgn0031483.1;Parent=FBgn0031483.1.mrna6;Target=FBgn0031483.1 1119 1 .
Chr2	stalkie_big_nohaplotig	mRNA	96377742	96378860	.	-	.	ID=FBgn0031483.1.mrna7;Name=FBgn0031483.1;Parent=FBgn0031483.1.path7;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1115;mismatches=4;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	96377742	96378860	99	-	.	ID=FBgn0031483.1.mrna7.exon1;Name=FBgn0031483.1;Parent=FBgn0031483.1.mrna7;Target=FBgn0031483.1 1119 1 .
Chr2	stalkie_big_nohaplotig	CDS	96377742	96378860	99	-	0	ID=FBgn0031483.1.mrna7.cds1;Name=FBgn0031483.1;Parent=FBgn0031483.1.mrna7;Target=FBgn0031483.1 1119 1 .
Chr2	stalkie_big_nohaplotig	mRNA	18252512	18253630	.	+	.	ID=FBgn0031483.1.mrna8;Name=FBgn0031483.1;Parent=FBgn0031483.1.path8;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1114;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	18252512	18253630	99	+	.	ID=FBgn0031483.1.mrna8.exon1;Name=FBgn0031483.1;Parent=FBgn0031483.1.mrna8;Target=FBgn0031483.1 1119 1 .
Chr2	stalkie_big_nohaplotig	CDS	18253133	18253630	99	+	0	ID=FBgn0031483.1.mrna8.cds1;Name=FBgn0031483.1;Parent=FBgn0031483.1.mrna8;Target=FBgn0031483.1 1119 622 .
Chr2	stalkie_big_nohaplotig	mRNA	19480126	19481244	.	-	.	ID=FBgn0031483.1.mrna9;Name=FBgn0031483.1;Parent=FBgn0031483.1.path9;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1114;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	19480126	19481244	99	-	.	ID=FBgn0031483.1.mrna9.exon1;Name=FBgn0031483.1;Parent=FBgn0031483.1.mrna9;Target=FBgn0031483.1 1119 1 .
Chr2	stalkie_big_nohaplotig	CDS	19480126	19481244	99	-	0	ID=FBgn0031483.1.mrna9.cds1;Name=FBgn0031483.1;Parent=FBgn0031483.1.mrna9;Target=FBgn0031483.1 1119 1 .
Chr1	stalkie_big_nohaplotig	mRNA	86787314	86790933	.	-	.	ID=ORF52.mrna1;Name=ORF52;Parent=ORF52.path1;Dir=sensecoverage=100.0;identity=99.4;matches=3380;mismatches=19;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	86790873	86790933	100	-	.	ID=ORF52.mrna1.exon1;Name=ORF52;Parent=ORF52.mrna1;Target=ORF52 1 61 +
Chr1	stalkie_big_nohaplotig	exon	86788583	86790819	99	-	.	ID=ORF52.mrna1.exon2;Name=ORF52;Parent=ORF52.mrna1;Target=ORF52 62 2298 +
Chr1	stalkie_big_nohaplotig	exon	86787314	86788414	99	-	.	ID=ORF52.mrna1.exon3;Name=ORF52;Parent=ORF52.mrna1;Target=ORF52 2299 3399 +
Chr1	stalkie_big_nohaplotig	CDS	86790873	86790933	100	-	0	ID=ORF52.mrna1.cds1;Name=ORF52;Parent=ORF52.mrna1;Target=ORF52 1 61 +
Chr1	stalkie_big_nohaplotig	CDS	86788583	86790819	99	-	1	ID=ORF52.mrna1.cds2;Name=ORF52;Parent=ORF52.mrna1;Target=ORF52 62 2298 +
Chr1	stalkie_big_nohaplotig	CDS	86787314	86788414	99	-	0	ID=ORF52.mrna1.cds3;Name=ORF52;Parent=ORF52.mrna1;Target=ORF52 2299 3399 +
ChrX	stalkie_big_nohaplotig	mRNA	87086455	87136118	.	-	.	ID=FBgn0032946.1.mrna1;Name=FBgn0032946.1;Parent=FBgn0032946.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=936;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	87135989	87136118	100	-	.	ID=FBgn0032946.1.mrna1.exon1;Name=FBgn0032946.1;Parent=FBgn0032946.1.mrna1;Target=FBgn0032946.1 1 130 +
ChrX	stalkie_big_nohaplotig	exon	87100012	87100152	100	-	.	ID=FBgn0032946.1.mrna1.exon2;Name=FBgn0032946.1;Parent=FBgn0032946.1.mrna1;Target=FBgn0032946.1 131 271 +
ChrX	stalkie_big_nohaplotig	exon	87096559	87096678	100	-	.	ID=FBgn0032946.1.mrna1.exon3;Name=FBgn0032946.1;Parent=FBgn0032946.1.mrna1;Target=FBgn0032946.1 272 391 +
ChrX	stalkie_big_nohaplotig	exon	87092468	87092634	100	-	.	ID=FBgn0032946.1.mrna1.exon4;Name=FBgn0032946.1;Parent=FBgn0032946.1.mrna1;Target=FBgn0032946.1 392 558 +
ChrX	stalkie_big_nohaplotig	exon	87092286	87092396	100	-	.	ID=FBgn0032946.1.mrna1.exon5;Name=FBgn0032946.1;Parent=FBgn0032946.1.mrna1;Target=FBgn0032946.1 559 669 +
ChrX	stalkie_big_nohaplotig	exon	87091779	87091944	100	-	.	ID=FBgn0032946.1.mrna1.exon6;Name=FBgn0032946.1;Parent=FBgn0032946.1.mrna1;Target=FBgn0032946.1 670 835 +
ChrX	stalkie_big_nohaplotig	exon	87086455	87086555	100	-	.	ID=FBgn0032946.1.mrna1.exon7;Name=FBgn0032946.1;Parent=FBgn0032946.1.mrna1;Target=FBgn0032946.1 836 936 +
ChrX	stalkie_big_nohaplotig	CDS	87135989	87136118	100	-	0	ID=FBgn0032946.1.mrna1.cds1;Name=FBgn0032946.1;Parent=FBgn0032946.1.mrna1;Target=FBgn0032946.1 1 130 +
ChrX	stalkie_big_nohaplotig	CDS	87100012	87100152	100	-	1	ID=FBgn0032946.1.mrna1.cds2;Name=FBgn0032946.1;Parent=FBgn0032946.1.mrna1;Target=FBgn0032946.1 131 271 +
ChrX	stalkie_big_nohaplotig	CDS	87096559	87096678	100	-	1	ID=FBgn0032946.1.mrna1.cds3;Name=FBgn0032946.1;Parent=FBgn0032946.1.mrna1;Target=FBgn0032946.1 272 391 +
ChrX	stalkie_big_nohaplotig	CDS	87092468	87092634	100	-	1	ID=FBgn0032946.1.mrna1.cds4;Name=FBgn0032946.1;Parent=FBgn0032946.1.mrna1;Target=FBgn0032946.1 392 558 +
ChrX	stalkie_big_nohaplotig	CDS	87092286	87092396	100	-	0	ID=FBgn0032946.1.mrna1.cds5;Name=FBgn0032946.1;Parent=FBgn0032946.1.mrna1;Target=FBgn0032946.1 559 669 +
ChrX	stalkie_big_nohaplotig	CDS	87091779	87091944	100	-	0	ID=FBgn0032946.1.mrna1.cds6;Name=FBgn0032946.1;Parent=FBgn0032946.1.mrna1;Target=FBgn0032946.1 670 835 +
ChrX	stalkie_big_nohaplotig	CDS	87086455	87086555	100	-	1	ID=FBgn0032946.1.mrna1.cds7;Name=FBgn0032946.1;Parent=FBgn0032946.1.mrna1;Target=FBgn0032946.1 836 936 +
ChrX	stalkie_big_nohaplotig	mRNA	4730475	4730930	.	+	.	ID=FBgn0033551.2.mrna1;Name=FBgn0033551.2;Parent=FBgn0033551.2.path1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=451;mismatches=5;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	4730475	4730930	98	+	.	ID=FBgn0033551.2.mrna1.exon1;Name=FBgn0033551.2;Parent=FBgn0033551.2.mrna1;Target=FBgn0033551.2 456 1 .
ChrX	stalkie_big_nohaplotig	CDS	4730475	4730930	98	+	0	ID=FBgn0033551.2.mrna1.cds1;Name=FBgn0033551.2;Parent=FBgn0033551.2.mrna1;Target=FBgn0033551.2 456 1 .
Chr2	stalkie_big_nohaplotig	mRNA	27437079	27441326	.	+	.	ID=FBgn0034476.1.mrna1;Name=FBgn0034476.1;Parent=FBgn0034476.1.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=4248;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	27437079	27441326	100	+	.	ID=FBgn0034476.1.mrna1.exon1;Name=FBgn0034476.1;Parent=FBgn0034476.1.mrna1;Target=FBgn0034476.1 4248 1 .
Chr2	stalkie_big_nohaplotig	CDS	27437079	27441326	100	+	0	ID=FBgn0034476.1.mrna1.cds1;Name=FBgn0034476.1;Parent=FBgn0034476.1.mrna1;Target=FBgn0034476.1 4248 1 .
Chr2	stalkie_big_nohaplotig	mRNA	3299941	3302194	.	-	.	ID=FBgn0015754.1.mrna1;Name=FBgn0015754.1;Parent=FBgn0015754.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1252;mismatches=1;indels=0;unknowns=1
Chr2	stalkie_big_nohaplotig	exon	3302136	3302194	100	-	.	ID=FBgn0015754.1.mrna1.exon1;Name=FBgn0015754.1;Parent=FBgn0015754.1.mrna1;Target=FBgn0015754.1 1 59 +
Chr2	stalkie_big_nohaplotig	exon	3301780	3302080	99	-	.	ID=FBgn0015754.1.mrna1.exon2;Name=FBgn0015754.1;Parent=FBgn0015754.1.mrna1;Target=FBgn0015754.1 60 360 +
Chr2	stalkie_big_nohaplotig	exon	3301555	3301711	100	-	.	ID=FBgn0015754.1.mrna1.exon3;Name=FBgn0015754.1;Parent=FBgn0015754.1.mrna1;Target=FBgn0015754.1 361 517 +
Chr2	stalkie_big_nohaplotig	exon	3301320	3301497	100	-	.	ID=FBgn0015754.1.mrna1.exon4;Name=FBgn0015754.1;Parent=FBgn0015754.1.mrna1;Target=FBgn0015754.1 518 695 +
Chr2	stalkie_big_nohaplotig	exon	3301126	3301261	100	-	.	ID=FBgn0015754.1.mrna1.exon5;Name=FBgn0015754.1;Parent=FBgn0015754.1.mrna1;Target=FBgn0015754.1 696 831 +
Chr2	stalkie_big_nohaplotig	exon	3300910	3301065	100	-	.	ID=FBgn0015754.1.mrna1.exon6;Name=FBgn0015754.1;Parent=FBgn0015754.1.mrna1;Target=FBgn0015754.1 832 987 +
Chr2	stalkie_big_nohaplotig	exon	3300073	3300268	100	-	.	ID=FBgn0015754.1.mrna1.exon7;Name=FBgn0015754.1;Parent=FBgn0015754.1.mrna1;Target=FBgn0015754.1 988 1183 +
Chr2	stalkie_big_nohaplotig	exon	3299941	3300011	100	-	.	ID=FBgn0015754.1.mrna1.exon8;Name=FBgn0015754.1;Parent=FBgn0015754.1.mrna1;Target=FBgn0015754.1 1184 1254 +
Chr2	stalkie_big_nohaplotig	CDS	3302136	3302194	100	-	0	ID=FBgn0015754.1.mrna1.cds1;Name=FBgn0015754.1;Parent=FBgn0015754.1.mrna1;Target=FBgn0015754.1 1 59 +
Chr2	stalkie_big_nohaplotig	CDS	3301780	3302080	99	-	2	ID=FBgn0015754.1.mrna1.cds2;Name=FBgn0015754.1;Parent=FBgn0015754.1.mrna1;Target=FBgn0015754.1 60 360 +
Chr2	stalkie_big_nohaplotig	CDS	3301555	3301711	100	-	0	ID=FBgn0015754.1.mrna1.cds3;Name=FBgn0015754.1;Parent=FBgn0015754.1.mrna1;Target=FBgn0015754.1 361 517 +
Chr2	stalkie_big_nohaplotig	CDS	3301320	3301497	100	-	1	ID=FBgn0015754.1.mrna1.cds4;Name=FBgn0015754.1;Parent=FBgn0015754.1.mrna1;Target=FBgn0015754.1 518 695 +
Chr2	stalkie_big_nohaplotig	CDS	3301126	3301261	100	-	2	ID=FBgn0015754.1.mrna1.cds5;Name=FBgn0015754.1;Parent=FBgn0015754.1.mrna1;Target=FBgn0015754.1 696 831 +
Chr2	stalkie_big_nohaplotig	CDS	3300910	3301065	100	-	0	ID=FBgn0015754.1.mrna1.cds6;Name=FBgn0015754.1;Parent=FBgn0015754.1.mrna1;Target=FBgn0015754.1 832 987 +
Chr2	stalkie_big_nohaplotig	CDS	3300073	3300268	100	-	0	ID=FBgn0015754.1.mrna1.cds7;Name=FBgn0015754.1;Parent=FBgn0015754.1.mrna1;Target=FBgn0015754.1 988 1183 +
Chr2	stalkie_big_nohaplotig	CDS	3299941	3300011	100	-	1	ID=FBgn0015754.1.mrna1.cds8;Name=FBgn0015754.1;Parent=FBgn0015754.1.mrna1;Target=FBgn0015754.1 1184 1254 +
Chr2	stalkie_big_nohaplotig	mRNA	3281014	3282684	.	-	.	ID=FBgn0034089.1.mrna1;Name=FBgn0034089.1;Parent=FBgn0034089.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1307;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	3282001	3282684	100	-	.	ID=FBgn0034089.1.mrna1.exon1;Name=FBgn0034089.1;Parent=FBgn0034089.1.mrna1;Target=FBgn0034089.1 1 684 +
Chr2	stalkie_big_nohaplotig	exon	3281661	3281768	100	-	.	ID=FBgn0034089.1.mrna1.exon2;Name=FBgn0034089.1;Parent=FBgn0034089.1.mrna1;Target=FBgn0034089.1 685 792 +
Chr2	stalkie_big_nohaplotig	exon	3281239	3281592	99	-	.	ID=FBgn0034089.1.mrna1.exon3;Name=FBgn0034089.1;Parent=FBgn0034089.1.mrna1;Target=FBgn0034089.1 793 1146 +
Chr2	stalkie_big_nohaplotig	exon	3281014	3281175	100	-	.	ID=FBgn0034089.1.mrna1.exon4;Name=FBgn0034089.1;Parent=FBgn0034089.1.mrna1;Target=FBgn0034089.1 1147 1308 +
Chr2	stalkie_big_nohaplotig	CDS	3282001	3282684	100	-	0	ID=FBgn0034089.1.mrna1.cds1;Name=FBgn0034089.1;Parent=FBgn0034089.1.mrna1;Target=FBgn0034089.1 1 684 +
Chr2	stalkie_big_nohaplotig	CDS	3281661	3281768	100	-	0	ID=FBgn0034089.1.mrna1.cds2;Name=FBgn0034089.1;Parent=FBgn0034089.1.mrna1;Target=FBgn0034089.1 685 792 +
Chr2	stalkie_big_nohaplotig	CDS	3281239	3281592	99	-	0	ID=FBgn0034089.1.mrna1.cds3;Name=FBgn0034089.1;Parent=FBgn0034089.1.mrna1;Target=FBgn0034089.1 793 1146 +
Chr2	stalkie_big_nohaplotig	CDS	3281014	3281175	100	-	0	ID=FBgn0034089.1.mrna1.cds4;Name=FBgn0034089.1;Parent=FBgn0034089.1.mrna1;Target=FBgn0034089.1 1147 1308 +
Chr2	stalkie_big_nohaplotig	mRNA	3372654	3375216	.	+	.	ID=FBgn0035001.mrna1;Name=FBgn0035001;Parent=FBgn0035001.path1;Dir=sensecoverage=100.0;identity=99.5;matches=2084;mismatches=4;indels=6;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	3372654	3373451	100	+	.	ID=FBgn0035001.mrna1.exon1;Name=FBgn0035001;Parent=FBgn0035001.mrna1;Target=FBgn0035001 1 798 +
Chr2	stalkie_big_nohaplotig	exon	3373513	3373619	100	+	.	ID=FBgn0035001.mrna1.exon2;Name=FBgn0035001;Parent=FBgn0035001.mrna1;Target=FBgn0035001 799 905 +
Chr2	stalkie_big_nohaplotig	exon	3373687	3373819	100	+	.	ID=FBgn0035001.mrna1.exon3;Name=FBgn0035001;Parent=FBgn0035001.mrna1;Target=FBgn0035001 906 1038 +
Chr2	stalkie_big_nohaplotig	exon	3374161	3375216	99	+	.	ID=FBgn0035001.mrna1.exon4;Name=FBgn0035001;Parent=FBgn0035001.mrna1;Target=FBgn0035001 1039 2088 +
Chr2	stalkie_big_nohaplotig	CDS	3372654	3373451	100	+	0	ID=FBgn0035001.mrna1.cds1;Name=FBgn0035001;Parent=FBgn0035001.mrna1;Target=FBgn0035001 1 798 +
Chr2	stalkie_big_nohaplotig	CDS	3373513	3373619	100	+	0	ID=FBgn0035001.mrna1.cds2;Name=FBgn0035001;Parent=FBgn0035001.mrna1;Target=FBgn0035001 799 905 +
Chr2	stalkie_big_nohaplotig	CDS	3373687	3373819	100	+	2	ID=FBgn0035001.mrna1.cds3;Name=FBgn0035001;Parent=FBgn0035001.mrna1;Target=FBgn0035001 906 1038 +
Chr2	stalkie_big_nohaplotig	CDS	3374161	3375216	99	+	0	ID=FBgn0035001.mrna1.cds4;Name=FBgn0035001;Parent=FBgn0035001.mrna1;Target=FBgn0035001 1039 2088 +
Chr2	stalkie_big_nohaplotig	mRNA	143921795	143924227	.	+	.	ID=FBgn0010803.1.mrna1;Name=FBgn0010803.1;Parent=FBgn0010803.1.path1;Dir=sensecoverage=100.0;identity=99.1;matches=1270;mismatches=11;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	143921795	143921981	98	+	.	ID=FBgn0010803.1.mrna1.exon1;Name=FBgn0010803.1;Parent=FBgn0010803.1.mrna1;Target=FBgn0010803.1 1 187 +
Chr2	stalkie_big_nohaplotig	exon	143922046	143922274	99	+	.	ID=FBgn0010803.1.mrna1.exon2;Name=FBgn0010803.1;Parent=FBgn0010803.1.mrna1;Target=FBgn0010803.1 188 416 +
Chr2	stalkie_big_nohaplotig	exon	143922344	143922526	99	+	.	ID=FBgn0010803.1.mrna1.exon3;Name=FBgn0010803.1;Parent=FBgn0010803.1.mrna1;Target=FBgn0010803.1 417 599 +
Chr2	stalkie_big_nohaplotig	exon	143923471	143924050	99	+	.	ID=FBgn0010803.1.mrna1.exon4;Name=FBgn0010803.1;Parent=FBgn0010803.1.mrna1;Target=FBgn0010803.1 600 1179 +
Chr2	stalkie_big_nohaplotig	exon	143924126	143924227	99	+	.	ID=FBgn0010803.1.mrna1.exon5;Name=FBgn0010803.1;Parent=FBgn0010803.1.mrna1;Target=FBgn0010803.1 1180 1281 +
Chr2	stalkie_big_nohaplotig	CDS	143921795	143921981	98	+	0	ID=FBgn0010803.1.mrna1.cds1;Name=FBgn0010803.1;Parent=FBgn0010803.1.mrna1;Target=FBgn0010803.1 1 187 +
Chr2	stalkie_big_nohaplotig	CDS	143922046	143922274	99	+	1	ID=FBgn0010803.1.mrna1.cds2;Name=FBgn0010803.1;Parent=FBgn0010803.1.mrna1;Target=FBgn0010803.1 188 416 +
Chr2	stalkie_big_nohaplotig	CDS	143922344	143922526	99	+	2	ID=FBgn0010803.1.mrna1.cds3;Name=FBgn0010803.1;Parent=FBgn0010803.1.mrna1;Target=FBgn0010803.1 417 599 +
Chr2	stalkie_big_nohaplotig	CDS	143923471	143924050	99	+	2	ID=FBgn0010803.1.mrna1.cds4;Name=FBgn0010803.1;Parent=FBgn0010803.1.mrna1;Target=FBgn0010803.1 600 1179 +
Chr2	stalkie_big_nohaplotig	CDS	143924126	143924227	99	+	0	ID=FBgn0010803.1.mrna1.cds5;Name=FBgn0010803.1;Parent=FBgn0010803.1.mrna1;Target=FBgn0010803.1 1180 1281 +
Chr2	stalkie_big_nohaplotig	mRNA	4348162	4348874	.	-	.	ID=ORF3187.mrna1;Name=ORF3187;Parent=ORF3187.path1;Dir=indeterminatecoverage=93.9;identity=99.4;matches=709;mismatches=4;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	4348162	4348874	99	-	.	ID=ORF3187.mrna1.exon1;Name=ORF3187;Parent=ORF3187.mrna1;Target=ORF3187 759 47 .
Chr2	stalkie_big_nohaplotig	CDS	4348162	4348872	99	-	0	ID=ORF3187.mrna1.cds1;Name=ORF3187;Parent=ORF3187.mrna1;Target=ORF3187 759 49 .
Chr2	stalkie_big_nohaplotig	mRNA	67993940	67995773	.	+	.	ID=FBgn0039889.1.mrna1;Name=FBgn0039889.1;Parent=FBgn0039889.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1034;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	67993940	67994041	100	+	.	ID=FBgn0039889.1.mrna1.exon1;Name=FBgn0039889.1;Parent=FBgn0039889.1.mrna1;Target=FBgn0039889.1 1 102 +
Chr2	stalkie_big_nohaplotig	exon	67994095	67994214	100	+	.	ID=FBgn0039889.1.mrna1.exon2;Name=FBgn0039889.1;Parent=FBgn0039889.1.mrna1;Target=FBgn0039889.1 103 222 +
Chr2	stalkie_big_nohaplotig	exon	67994269	67994469	100	+	.	ID=FBgn0039889.1.mrna1.exon3;Name=FBgn0039889.1;Parent=FBgn0039889.1.mrna1;Target=FBgn0039889.1 223 423 +
Chr2	stalkie_big_nohaplotig	exon	67995162	67995773	99	+	.	ID=FBgn0039889.1.mrna1.exon4;Name=FBgn0039889.1;Parent=FBgn0039889.1.mrna1;Target=FBgn0039889.1 424 1035 +
Chr2	stalkie_big_nohaplotig	CDS	67993940	67994041	100	+	0	ID=FBgn0039889.1.mrna1.cds1;Name=FBgn0039889.1;Parent=FBgn0039889.1.mrna1;Target=FBgn0039889.1 1 102 +
Chr2	stalkie_big_nohaplotig	CDS	67994095	67994214	100	+	0	ID=FBgn0039889.1.mrna1.cds2;Name=FBgn0039889.1;Parent=FBgn0039889.1.mrna1;Target=FBgn0039889.1 103 222 +
Chr2	stalkie_big_nohaplotig	CDS	67994269	67994469	100	+	0	ID=FBgn0039889.1.mrna1.cds3;Name=FBgn0039889.1;Parent=FBgn0039889.1.mrna1;Target=FBgn0039889.1 223 423 +
Chr2	stalkie_big_nohaplotig	CDS	67995162	67995773	99	+	0	ID=FBgn0039889.1.mrna1.cds4;Name=FBgn0039889.1;Parent=FBgn0039889.1.mrna1;Target=FBgn0039889.1 424 1035 +
ChrX	stalkie_big_nohaplotig	mRNA	87416395	87417688	.	+	.	ID=ORF1254.mrna1;Name=ORF1254;Parent=ORF1254.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1160;mismatches=4;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	87416395	87416883	99	+	.	ID=ORF1254.mrna1.exon1;Name=ORF1254;Parent=ORF1254.mrna1;Target=ORF1254 1 489 +
ChrX	stalkie_big_nohaplotig	exon	87416951	87417223	99	+	.	ID=ORF1254.mrna1.exon2;Name=ORF1254;Parent=ORF1254.mrna1;Target=ORF1254 490 762 +
ChrX	stalkie_big_nohaplotig	exon	87417287	87417688	99	+	.	ID=ORF1254.mrna1.exon3;Name=ORF1254;Parent=ORF1254.mrna1;Target=ORF1254 763 1164 +
ChrX	stalkie_big_nohaplotig	CDS	87416395	87416883	99	+	0	ID=ORF1254.mrna1.cds1;Name=ORF1254;Parent=ORF1254.mrna1;Target=ORF1254 1 489 +
ChrX	stalkie_big_nohaplotig	CDS	87416951	87417223	99	+	0	ID=ORF1254.mrna1.cds2;Name=ORF1254;Parent=ORF1254.mrna1;Target=ORF1254 490 762 +
ChrX	stalkie_big_nohaplotig	CDS	87417287	87417688	99	+	0	ID=ORF1254.mrna1.cds3;Name=ORF1254;Parent=ORF1254.mrna1;Target=ORF1254 763 1164 +
Chr2	stalkie_big_nohaplotig	mRNA	42231889	42249710	.	-	.	ID=FBgn0020306.1.mrna1;Name=FBgn0020306.1;Parent=FBgn0020306.1.path1;Dir=sensecoverage=88.3;identity=99.3;matches=6642;mismatches=47;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	42249320	42249710	98	-	.	ID=FBgn0020306.1.mrna1.exon1;Name=FBgn0020306.1;Parent=FBgn0020306.1.mrna1;Target=FBgn0020306.1 884 1274 +
Chr2	stalkie_big_nohaplotig	exon	42247223	42247409	100	-	.	ID=FBgn0020306.1.mrna1.exon2;Name=FBgn0020306.1;Parent=FBgn0020306.1.mrna1;Target=FBgn0020306.1 1275 1461 +
Chr2	stalkie_big_nohaplotig	exon	42247026	42247162	99	-	.	ID=FBgn0020306.1.mrna1.exon3;Name=FBgn0020306.1;Parent=FBgn0020306.1.mrna1;Target=FBgn0020306.1 1462 1598 +
Chr2	stalkie_big_nohaplotig	exon	42246782	42246968	98	-	.	ID=FBgn0020306.1.mrna1.exon4;Name=FBgn0020306.1;Parent=FBgn0020306.1.mrna1;Target=FBgn0020306.1 1599 1785 +
Chr2	stalkie_big_nohaplotig	exon	42244494	42246524	99	-	.	ID=FBgn0020306.1.mrna1.exon5;Name=FBgn0020306.1;Parent=FBgn0020306.1.mrna1;Target=FBgn0020306.1 1786 3816 +
Chr2	stalkie_big_nohaplotig	exon	42242419	42242640	99	-	.	ID=FBgn0020306.1.mrna1.exon6;Name=FBgn0020306.1;Parent=FBgn0020306.1.mrna1;Target=FBgn0020306.1 3817 4038 +
Chr2	stalkie_big_nohaplotig	exon	42238359	42238394	100	-	.	ID=FBgn0020306.1.mrna1.exon7;Name=FBgn0020306.1;Parent=FBgn0020306.1.mrna1;Target=FBgn0020306.1 4039 4074 +
Chr2	stalkie_big_nohaplotig	exon	42232390	42235449	99	-	.	ID=FBgn0020306.1.mrna1.exon8;Name=FBgn0020306.1;Parent=FBgn0020306.1.mrna1;Target=FBgn0020306.1 4075 7134 +
Chr2	stalkie_big_nohaplotig	exon	42231889	42232326	99	-	.	ID=FBgn0020306.1.mrna1.exon9;Name=FBgn0020306.1;Parent=FBgn0020306.1.mrna1;Target=FBgn0020306.1 7135 7572 +
Chr2	stalkie_big_nohaplotig	CDS	42249320	42249708	98	-	0	ID=FBgn0020306.1.mrna1.cds1;Name=FBgn0020306.1;Parent=FBgn0020306.1.mrna1;Target=FBgn0020306.1 886 1274 +
Chr2	stalkie_big_nohaplotig	CDS	42247223	42247409	100	-	2	ID=FBgn0020306.1.mrna1.cds2;Name=FBgn0020306.1;Parent=FBgn0020306.1.mrna1;Target=FBgn0020306.1 1275 1461 +
Chr2	stalkie_big_nohaplotig	CDS	42247026	42247162	99	-	0	ID=FBgn0020306.1.mrna1.cds3;Name=FBgn0020306.1;Parent=FBgn0020306.1.mrna1;Target=FBgn0020306.1 1462 1598 +
Chr2	stalkie_big_nohaplotig	CDS	42246782	42246968	98	-	2	ID=FBgn0020306.1.mrna1.cds4;Name=FBgn0020306.1;Parent=FBgn0020306.1.mrna1;Target=FBgn0020306.1 1599 1785 +
Chr2	stalkie_big_nohaplotig	CDS	42244494	42246524	99	-	0	ID=FBgn0020306.1.mrna1.cds5;Name=FBgn0020306.1;Parent=FBgn0020306.1.mrna1;Target=FBgn0020306.1 1786 3816 +
Chr2	stalkie_big_nohaplotig	CDS	42242419	42242640	99	-	0	ID=FBgn0020306.1.mrna1.cds6;Name=FBgn0020306.1;Parent=FBgn0020306.1.mrna1;Target=FBgn0020306.1 3817 4038 +
Chr2	stalkie_big_nohaplotig	CDS	42238359	42238394	100	-	0	ID=FBgn0020306.1.mrna1.cds7;Name=FBgn0020306.1;Parent=FBgn0020306.1.mrna1;Target=FBgn0020306.1 4039 4074 +
Chr2	stalkie_big_nohaplotig	CDS	42232390	42235449	99	-	0	ID=FBgn0020306.1.mrna1.cds8;Name=FBgn0020306.1;Parent=FBgn0020306.1.mrna1;Target=FBgn0020306.1 4075 7134 +
Chr2	stalkie_big_nohaplotig	CDS	42231889	42232326	99	-	0	ID=FBgn0020306.1.mrna1.cds9;Name=FBgn0020306.1;Parent=FBgn0020306.1.mrna1;Target=FBgn0020306.1 7135 7572 +
Chr2	stalkie_big_nohaplotig	mRNA	122103336	122104052	.	-	.	ID=ORF3239.mrna2;Name=ORF3239;Parent=ORF3239.path2;Dir=indeterminatecoverage=95.2;identity=99.3;matches=712;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	122103336	122104052	99	-	.	ID=ORF3239.mrna2.exon1;Name=ORF3239;Parent=ORF3239.mrna2;Target=ORF3239 753 37 .
Chr2	stalkie_big_nohaplotig	CDS	122103336	122104052	99	-	0	ID=ORF3239.mrna2.cds1;Name=ORF3239;Parent=ORF3239.mrna2;Target=ORF3239 753 37 .
Chr2	stalkie_big_nohaplotig	mRNA	159141475	159143954	.	+	.	ID=FBgn0039789.1.mrna1;Name=FBgn0039789.1;Parent=FBgn0039789.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1933;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	159141475	159141843	100	+	.	ID=FBgn0039789.1.mrna1.exon1;Name=FBgn0039789.1;Parent=FBgn0039789.1.mrna1;Target=FBgn0039789.1 1 369 +
Chr2	stalkie_big_nohaplotig	exon	159142173	159142950	99	+	.	ID=FBgn0039789.1.mrna1.exon2;Name=FBgn0039789.1;Parent=FBgn0039789.1.mrna1;Target=FBgn0039789.1 370 1147 +
Chr2	stalkie_big_nohaplotig	exon	159143019	159143321	100	+	.	ID=FBgn0039789.1.mrna1.exon3;Name=FBgn0039789.1;Parent=FBgn0039789.1.mrna1;Target=FBgn0039789.1 1148 1450 +
Chr2	stalkie_big_nohaplotig	exon	159143409	159143554	100	+	.	ID=FBgn0039789.1.mrna1.exon4;Name=FBgn0039789.1;Parent=FBgn0039789.1.mrna1;Target=FBgn0039789.1 1451 1596 +
Chr2	stalkie_big_nohaplotig	exon	159143616	159143954	99	+	.	ID=FBgn0039789.1.mrna1.exon5;Name=FBgn0039789.1;Parent=FBgn0039789.1.mrna1;Target=FBgn0039789.1 1597 1935 +
Chr2	stalkie_big_nohaplotig	CDS	159141475	159141843	100	+	0	ID=FBgn0039789.1.mrna1.cds1;Name=FBgn0039789.1;Parent=FBgn0039789.1.mrna1;Target=FBgn0039789.1 1 369 +
Chr2	stalkie_big_nohaplotig	CDS	159142173	159142950	99	+	0	ID=FBgn0039789.1.mrna1.cds2;Name=FBgn0039789.1;Parent=FBgn0039789.1.mrna1;Target=FBgn0039789.1 370 1147 +
Chr2	stalkie_big_nohaplotig	CDS	159143019	159143321	100	+	1	ID=FBgn0039789.1.mrna1.cds3;Name=FBgn0039789.1;Parent=FBgn0039789.1.mrna1;Target=FBgn0039789.1 1148 1450 +
Chr2	stalkie_big_nohaplotig	CDS	159143409	159143554	100	+	1	ID=FBgn0039789.1.mrna1.cds4;Name=FBgn0039789.1;Parent=FBgn0039789.1.mrna1;Target=FBgn0039789.1 1451 1596 +
Chr2	stalkie_big_nohaplotig	CDS	159143616	159143954	99	+	0	ID=FBgn0039789.1.mrna1.cds5;Name=FBgn0039789.1;Parent=FBgn0039789.1.mrna1;Target=FBgn0039789.1 1597 1935 +
Chr2	stalkie_big_nohaplotig	mRNA	162712707	162717718	.	+	.	ID=FBgn0042085.1.mrna1;Name=FBgn0042085.1;Parent=FBgn0042085.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=4537;mismatches=14;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	162712707	162712972	99	+	.	ID=FBgn0042085.1.mrna1.exon1;Name=FBgn0042085.1;Parent=FBgn0042085.1.mrna1;Target=FBgn0042085.1 1 266 +
Chr2	stalkie_big_nohaplotig	exon	162713028	162714007	99	+	.	ID=FBgn0042085.1.mrna1.exon2;Name=FBgn0042085.1;Parent=FBgn0042085.1.mrna1;Target=FBgn0042085.1 267 1246 +
Chr2	stalkie_big_nohaplotig	exon	162714068	162715393	99	+	.	ID=FBgn0042085.1.mrna1.exon3;Name=FBgn0042085.1;Parent=FBgn0042085.1.mrna1;Target=FBgn0042085.1 1247 2572 +
Chr2	stalkie_big_nohaplotig	exon	162715453	162716435	99	+	.	ID=FBgn0042085.1.mrna1.exon4;Name=FBgn0042085.1;Parent=FBgn0042085.1.mrna1;Target=FBgn0042085.1 2573 3555 +
Chr2	stalkie_big_nohaplotig	exon	162716723	162717718	99	+	.	ID=FBgn0042085.1.mrna1.exon5;Name=FBgn0042085.1;Parent=FBgn0042085.1.mrna1;Target=FBgn0042085.1 3556 4552 +
Chr2	stalkie_big_nohaplotig	CDS	162712707	162712972	99	+	0	ID=FBgn0042085.1.mrna1.cds1;Name=FBgn0042085.1;Parent=FBgn0042085.1.mrna1;Target=FBgn0042085.1 1 266 +
Chr2	stalkie_big_nohaplotig	CDS	162713028	162714007	99	+	2	ID=FBgn0042085.1.mrna1.cds2;Name=FBgn0042085.1;Parent=FBgn0042085.1.mrna1;Target=FBgn0042085.1 267 1246 +
Chr2	stalkie_big_nohaplotig	CDS	162714068	162715393	99	+	1	ID=FBgn0042085.1.mrna1.cds3;Name=FBgn0042085.1;Parent=FBgn0042085.1.mrna1;Target=FBgn0042085.1 1247 2572 +
Chr2	stalkie_big_nohaplotig	CDS	162715453	162716435	99	+	1	ID=FBgn0042085.1.mrna1.cds4;Name=FBgn0042085.1;Parent=FBgn0042085.1.mrna1;Target=FBgn0042085.1 2573 3555 +
Chr2	stalkie_big_nohaplotig	CDS	162716723	162717717	99	+	0	ID=FBgn0042085.1.mrna1.cds5;Name=FBgn0042085.1;Parent=FBgn0042085.1.mrna1;Target=FBgn0042085.1 3556 4551 +
Chr2	stalkie_big_nohaplotig	mRNA	39561435	39562280	.	+	.	ID=FBgn0061361.1.mrna1;Name=FBgn0061361.1;Parent=FBgn0061361.1.path1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=844;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	39561435	39562280	99	+	.	ID=FBgn0061361.1.mrna1.exon1;Name=FBgn0061361.1;Parent=FBgn0061361.1.mrna1;Target=FBgn0061361.1 846 1 .
Chr2	stalkie_big_nohaplotig	CDS	39561435	39562280	99	+	0	ID=FBgn0061361.1.mrna1.cds1;Name=FBgn0061361.1;Parent=FBgn0061361.1.mrna1;Target=FBgn0061361.1 846 1 .
Chr2	stalkie_big_nohaplotig	mRNA	80551775	80565691	.	+	.	ID=FBgn0250757.5.mrna1;Name=FBgn0250757.5;Parent=FBgn0250757.5.path1;Dir=sensecoverage=100.0;identity=99.3;matches=2156;mismatches=16;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	80551775	80552424	98	+	.	ID=FBgn0250757.5.mrna1.exon1;Name=FBgn0250757.5;Parent=FBgn0250757.5.mrna1;Target=FBgn0250757.5 1 650 +
Chr2	stalkie_big_nohaplotig	exon	80554522	80554681	98	+	.	ID=FBgn0250757.5.mrna1.exon2;Name=FBgn0250757.5;Parent=FBgn0250757.5.mrna1;Target=FBgn0250757.5 651 810 +
Chr2	stalkie_big_nohaplotig	exon	80563028	80563093	100	+	.	ID=FBgn0250757.5.mrna1.exon3;Name=FBgn0250757.5;Parent=FBgn0250757.5.mrna1;Target=FBgn0250757.5 811 876 +
Chr2	stalkie_big_nohaplotig	exon	80563147	80563198	100	+	.	ID=FBgn0250757.5.mrna1.exon4;Name=FBgn0250757.5;Parent=FBgn0250757.5.mrna1;Target=FBgn0250757.5 877 928 +
Chr2	stalkie_big_nohaplotig	exon	80564109	80564176	100	+	.	ID=FBgn0250757.5.mrna1.exon5;Name=FBgn0250757.5;Parent=FBgn0250757.5.mrna1;Target=FBgn0250757.5 929 996 +
Chr2	stalkie_big_nohaplotig	exon	80564262	80564416	100	+	.	ID=FBgn0250757.5.mrna1.exon6;Name=FBgn0250757.5;Parent=FBgn0250757.5.mrna1;Target=FBgn0250757.5 997 1151 +
Chr2	stalkie_big_nohaplotig	exon	80564509	80564758	99	+	.	ID=FBgn0250757.5.mrna1.exon7;Name=FBgn0250757.5;Parent=FBgn0250757.5.mrna1;Target=FBgn0250757.5 1152 1401 +
Chr2	stalkie_big_nohaplotig	exon	80564824	80565201	99	+	.	ID=FBgn0250757.5.mrna1.exon8;Name=FBgn0250757.5;Parent=FBgn0250757.5.mrna1;Target=FBgn0250757.5 1402 1779 +
Chr2	stalkie_big_nohaplotig	exon	80565250	80565422	100	+	.	ID=FBgn0250757.5.mrna1.exon9;Name=FBgn0250757.5;Parent=FBgn0250757.5.mrna1;Target=FBgn0250757.5 1780 1952 +
Chr2	stalkie_big_nohaplotig	exon	80565472	80565691	100	+	.	ID=FBgn0250757.5.mrna1.exon10;Name=FBgn0250757.5;Parent=FBgn0250757.5.mrna1;Target=FBgn0250757.5 1953 2172 +
Chr2	stalkie_big_nohaplotig	CDS	80551775	80552424	98	+	0	ID=FBgn0250757.5.mrna1.cds1;Name=FBgn0250757.5;Parent=FBgn0250757.5.mrna1;Target=FBgn0250757.5 1 650 +
Chr2	stalkie_big_nohaplotig	CDS	80554522	80554681	98	+	2	ID=FBgn0250757.5.mrna1.cds2;Name=FBgn0250757.5;Parent=FBgn0250757.5.mrna1;Target=FBgn0250757.5 651 810 +
Chr2	stalkie_big_nohaplotig	CDS	80563028	80563093	100	+	0	ID=FBgn0250757.5.mrna1.cds3;Name=FBgn0250757.5;Parent=FBgn0250757.5.mrna1;Target=FBgn0250757.5 811 876 +
Chr2	stalkie_big_nohaplotig	CDS	80563147	80563198	100	+	0	ID=FBgn0250757.5.mrna1.cds4;Name=FBgn0250757.5;Parent=FBgn0250757.5.mrna1;Target=FBgn0250757.5 877 928 +
Chr2	stalkie_big_nohaplotig	CDS	80564109	80564176	100	+	1	ID=FBgn0250757.5.mrna1.cds5;Name=FBgn0250757.5;Parent=FBgn0250757.5.mrna1;Target=FBgn0250757.5 929 996 +
Chr2	stalkie_big_nohaplotig	CDS	80564262	80564416	100	+	0	ID=FBgn0250757.5.mrna1.cds6;Name=FBgn0250757.5;Parent=FBgn0250757.5.mrna1;Target=FBgn0250757.5 997 1151 +
Chr2	stalkie_big_nohaplotig	CDS	80564509	80564758	99	+	2	ID=FBgn0250757.5.mrna1.cds7;Name=FBgn0250757.5;Parent=FBgn0250757.5.mrna1;Target=FBgn0250757.5 1152 1401 +
Chr2	stalkie_big_nohaplotig	CDS	80564824	80565201	99	+	0	ID=FBgn0250757.5.mrna1.cds8;Name=FBgn0250757.5;Parent=FBgn0250757.5.mrna1;Target=FBgn0250757.5 1402 1779 +
Chr2	stalkie_big_nohaplotig	CDS	80565250	80565422	100	+	0	ID=FBgn0250757.5.mrna1.cds9;Name=FBgn0250757.5;Parent=FBgn0250757.5.mrna1;Target=FBgn0250757.5 1780 1952 +
Chr2	stalkie_big_nohaplotig	CDS	80565472	80565691	100	+	2	ID=FBgn0250757.5.mrna1.cds10;Name=FBgn0250757.5;Parent=FBgn0250757.5.mrna1;Target=FBgn0250757.5 1953 2172 +
Chr2	stalkie_big_nohaplotig	mRNA	76013545	76015218	.	+	.	ID=FBgn0039008.1.mrna1;Name=FBgn0039008.1;Parent=FBgn0039008.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=891;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	76013545	76013667	100	+	.	ID=FBgn0039008.1.mrna1.exon1;Name=FBgn0039008.1;Parent=FBgn0039008.1.mrna1;Target=FBgn0039008.1 1 123 +
Chr2	stalkie_big_nohaplotig	exon	76014100	76014435	100	+	.	ID=FBgn0039008.1.mrna1.exon2;Name=FBgn0039008.1;Parent=FBgn0039008.1.mrna1;Target=FBgn0039008.1 124 459 +
Chr2	stalkie_big_nohaplotig	exon	76014496	76014696	100	+	.	ID=FBgn0039008.1.mrna1.exon3;Name=FBgn0039008.1;Parent=FBgn0039008.1.mrna1;Target=FBgn0039008.1 460 660 +
Chr2	stalkie_big_nohaplotig	exon	76014771	76014884	100	+	.	ID=FBgn0039008.1.mrna1.exon4;Name=FBgn0039008.1;Parent=FBgn0039008.1.mrna1;Target=FBgn0039008.1 661 774 +
Chr2	stalkie_big_nohaplotig	exon	76015102	76015218	100	+	.	ID=FBgn0039008.1.mrna1.exon5;Name=FBgn0039008.1;Parent=FBgn0039008.1.mrna1;Target=FBgn0039008.1 775 891 +
Chr2	stalkie_big_nohaplotig	CDS	76013545	76013667	100	+	0	ID=FBgn0039008.1.mrna1.cds1;Name=FBgn0039008.1;Parent=FBgn0039008.1.mrna1;Target=FBgn0039008.1 1 123 +
Chr2	stalkie_big_nohaplotig	CDS	76014100	76014435	100	+	0	ID=FBgn0039008.1.mrna1.cds2;Name=FBgn0039008.1;Parent=FBgn0039008.1.mrna1;Target=FBgn0039008.1 124 459 +
Chr2	stalkie_big_nohaplotig	CDS	76014496	76014696	100	+	0	ID=FBgn0039008.1.mrna1.cds3;Name=FBgn0039008.1;Parent=FBgn0039008.1.mrna1;Target=FBgn0039008.1 460 660 +
Chr2	stalkie_big_nohaplotig	CDS	76014771	76014884	100	+	0	ID=FBgn0039008.1.mrna1.cds4;Name=FBgn0039008.1;Parent=FBgn0039008.1.mrna1;Target=FBgn0039008.1 661 774 +
Chr2	stalkie_big_nohaplotig	CDS	76015102	76015218	100	+	0	ID=FBgn0039008.1.mrna1.cds5;Name=FBgn0039008.1;Parent=FBgn0039008.1.mrna1;Target=FBgn0039008.1 775 891 +
ChrX	stalkie_big_nohaplotig	mRNA	56968936	56992808	.	-	.	ID=FBgn0013433.2.mrna1;Name=FBgn0013433.2;Parent=FBgn0013433.2.path1;Dir=sensecoverage=93.1;identity=99.6;matches=901;mismatches=4;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	56992600	56992808	100	-	.	ID=FBgn0013433.2.mrna1.exon1;Name=FBgn0013433.2;Parent=FBgn0013433.2.mrna1;Target=FBgn0013433.2 68 276 +
ChrX	stalkie_big_nohaplotig	exon	56983068	56983203	99	-	.	ID=FBgn0013433.2.mrna1.exon2;Name=FBgn0013433.2;Parent=FBgn0013433.2.mrna1;Target=FBgn0013433.2 277 412 +
ChrX	stalkie_big_nohaplotig	exon	56981833	56981966	99	-	.	ID=FBgn0013433.2.mrna1.exon3;Name=FBgn0013433.2;Parent=FBgn0013433.2.mrna1;Target=FBgn0013433.2 413 546 +
ChrX	stalkie_big_nohaplotig	exon	56974531	56974650	100	-	.	ID=FBgn0013433.2.mrna1.exon4;Name=FBgn0013433.2;Parent=FBgn0013433.2.mrna1;Target=FBgn0013433.2 547 666 +
ChrX	stalkie_big_nohaplotig	exon	56972307	56972493	98	-	.	ID=FBgn0013433.2.mrna1.exon5;Name=FBgn0013433.2;Parent=FBgn0013433.2.mrna1;Target=FBgn0013433.2 667 853 +
ChrX	stalkie_big_nohaplotig	exon	56968936	56969054	100	-	.	ID=FBgn0013433.2.mrna1.exon6;Name=FBgn0013433.2;Parent=FBgn0013433.2.mrna1;Target=FBgn0013433.2 854 972 +
ChrX	stalkie_big_nohaplotig	CDS	56992600	56992806	100	-	0	ID=FBgn0013433.2.mrna1.cds1;Name=FBgn0013433.2;Parent=FBgn0013433.2.mrna1;Target=FBgn0013433.2 70 276 +
ChrX	stalkie_big_nohaplotig	CDS	56983068	56983203	99	-	0	ID=FBgn0013433.2.mrna1.cds2;Name=FBgn0013433.2;Parent=FBgn0013433.2.mrna1;Target=FBgn0013433.2 277 412 +
ChrX	stalkie_big_nohaplotig	CDS	56981833	56981966	99	-	1	ID=FBgn0013433.2.mrna1.cds3;Name=FBgn0013433.2;Parent=FBgn0013433.2.mrna1;Target=FBgn0013433.2 413 546 +
ChrX	stalkie_big_nohaplotig	CDS	56974531	56974650	100	-	0	ID=FBgn0013433.2.mrna1.cds4;Name=FBgn0013433.2;Parent=FBgn0013433.2.mrna1;Target=FBgn0013433.2 547 666 +
ChrX	stalkie_big_nohaplotig	CDS	56972307	56972493	98	-	0	ID=FBgn0013433.2.mrna1.cds5;Name=FBgn0013433.2;Parent=FBgn0013433.2.mrna1;Target=FBgn0013433.2 667 853 +
ChrX	stalkie_big_nohaplotig	CDS	56968936	56969054	100	-	1	ID=FBgn0013433.2.mrna1.cds6;Name=FBgn0013433.2;Parent=FBgn0013433.2.mrna1;Target=FBgn0013433.2 854 972 +
ChrX	stalkie_big_nohaplotig	mRNA	37417297	37420143	.	+	.	ID=FBgn0032258.1.mrna1;Name=FBgn0032258.1;Parent=FBgn0032258.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=2351;mismatches=7;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	37417297	37417428	100	+	.	ID=FBgn0032258.1.mrna1.exon1;Name=FBgn0032258.1;Parent=FBgn0032258.1.mrna1;Target=FBgn0032258.1 1 132 +
ChrX	stalkie_big_nohaplotig	exon	37417487	37418521	100	+	.	ID=FBgn0032258.1.mrna1.exon2;Name=FBgn0032258.1;Parent=FBgn0032258.1.mrna1;Target=FBgn0032258.1 133 1167 +
ChrX	stalkie_big_nohaplotig	exon	37418576	37418709	100	+	.	ID=FBgn0032258.1.mrna1.exon3;Name=FBgn0032258.1;Parent=FBgn0032258.1.mrna1;Target=FBgn0032258.1 1168 1301 +
ChrX	stalkie_big_nohaplotig	exon	37418767	37419370	99	+	.	ID=FBgn0032258.1.mrna1.exon4;Name=FBgn0032258.1;Parent=FBgn0032258.1.mrna1;Target=FBgn0032258.1 1302 1905 +
ChrX	stalkie_big_nohaplotig	exon	37419447	37419632	99	+	.	ID=FBgn0032258.1.mrna1.exon5;Name=FBgn0032258.1;Parent=FBgn0032258.1.mrna1;Target=FBgn0032258.1 1906 2091 +
ChrX	stalkie_big_nohaplotig	exon	37419813	37420039	100	+	.	ID=FBgn0032258.1.mrna1.exon6;Name=FBgn0032258.1;Parent=FBgn0032258.1.mrna1;Target=FBgn0032258.1 2092 2318 +
ChrX	stalkie_big_nohaplotig	exon	37420104	37420143	100	+	.	ID=FBgn0032258.1.mrna1.exon7;Name=FBgn0032258.1;Parent=FBgn0032258.1.mrna1;Target=FBgn0032258.1 2319 2358 +
ChrX	stalkie_big_nohaplotig	CDS	37417297	37417428	100	+	0	ID=FBgn0032258.1.mrna1.cds1;Name=FBgn0032258.1;Parent=FBgn0032258.1.mrna1;Target=FBgn0032258.1 1 132 +
ChrX	stalkie_big_nohaplotig	CDS	37417487	37418521	100	+	0	ID=FBgn0032258.1.mrna1.cds2;Name=FBgn0032258.1;Parent=FBgn0032258.1.mrna1;Target=FBgn0032258.1 133 1167 +
ChrX	stalkie_big_nohaplotig	CDS	37418576	37418709	100	+	0	ID=FBgn0032258.1.mrna1.cds3;Name=FBgn0032258.1;Parent=FBgn0032258.1.mrna1;Target=FBgn0032258.1 1168 1301 +
ChrX	stalkie_big_nohaplotig	CDS	37418767	37419370	99	+	2	ID=FBgn0032258.1.mrna1.cds4;Name=FBgn0032258.1;Parent=FBgn0032258.1.mrna1;Target=FBgn0032258.1 1302 1905 +
ChrX	stalkie_big_nohaplotig	CDS	37419447	37419632	99	+	0	ID=FBgn0032258.1.mrna1.cds5;Name=FBgn0032258.1;Parent=FBgn0032258.1.mrna1;Target=FBgn0032258.1 1906 2091 +
ChrX	stalkie_big_nohaplotig	CDS	37419813	37420039	100	+	0	ID=FBgn0032258.1.mrna1.cds6;Name=FBgn0032258.1;Parent=FBgn0032258.1.mrna1;Target=FBgn0032258.1 2092 2318 +
ChrX	stalkie_big_nohaplotig	CDS	37420104	37420143	100	+	2	ID=FBgn0032258.1.mrna1.cds7;Name=FBgn0032258.1;Parent=FBgn0032258.1.mrna1;Target=FBgn0032258.1 2319 2358 +
Chr1	stalkie_big_nohaplotig	mRNA	141621043	141624864	.	+	.	ID=ORF60.mrna1;Name=ORF60;Parent=ORF60.path1;Dir=sensecoverage=100.0;identity=98.9;matches=3277;mismatches=32;indels=6;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	141621043	141622234	98	+	.	ID=ORF60.mrna1.exon1;Name=ORF60;Parent=ORF60.mrna1;Target=ORF60 1 1198 +
Chr1	stalkie_big_nohaplotig	exon	141622293	141622480	100	+	.	ID=ORF60.mrna1.exon2;Name=ORF60;Parent=ORF60.mrna1;Target=ORF60 1199 1386 +
Chr1	stalkie_big_nohaplotig	exon	141622540	141623746	98	+	.	ID=ORF60.mrna1.exon3;Name=ORF60;Parent=ORF60.mrna1;Target=ORF60 1387 2593 +
Chr1	stalkie_big_nohaplotig	exon	141623802	141624253	99	+	.	ID=ORF60.mrna1.exon4;Name=ORF60;Parent=ORF60.mrna1;Target=ORF60 2594 3045 +
Chr1	stalkie_big_nohaplotig	exon	141624531	141624660	100	+	.	ID=ORF60.mrna1.exon5;Name=ORF60;Parent=ORF60.mrna1;Target=ORF60 3046 3175 +
Chr1	stalkie_big_nohaplotig	exon	141624725	141624864	100	+	.	ID=ORF60.mrna1.exon6;Name=ORF60;Parent=ORF60.mrna1;Target=ORF60 3176 3315 +
Chr1	stalkie_big_nohaplotig	CDS	141621043	141622234	98	+	0	ID=ORF60.mrna1.cds1;Name=ORF60;Parent=ORF60.mrna1;Target=ORF60 1 1198 +
Chr1	stalkie_big_nohaplotig	CDS	141622293	141622480	100	+	1	ID=ORF60.mrna1.cds2;Name=ORF60;Parent=ORF60.mrna1;Target=ORF60 1199 1386 +
Chr1	stalkie_big_nohaplotig	CDS	141622540	141623746	98	+	0	ID=ORF60.mrna1.cds3;Name=ORF60;Parent=ORF60.mrna1;Target=ORF60 1387 2593 +
Chr1	stalkie_big_nohaplotig	CDS	141623802	141624253	99	+	1	ID=ORF60.mrna1.cds4;Name=ORF60;Parent=ORF60.mrna1;Target=ORF60 2594 3045 +
Chr1	stalkie_big_nohaplotig	CDS	141624531	141624660	100	+	0	ID=ORF60.mrna1.cds5;Name=ORF60;Parent=ORF60.mrna1;Target=ORF60 3046 3175 +
Chr1	stalkie_big_nohaplotig	CDS	141624725	141624864	100	+	1	ID=ORF60.mrna1.cds6;Name=ORF60;Parent=ORF60.mrna1;Target=ORF60 3176 3315 +
ChrX	stalkie_big_nohaplotig	mRNA	44923088	44938139	.	-	.	ID=FBgn0031251.1.mrna1;Name=FBgn0031251.1;Parent=FBgn0031251.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3212;mismatches=0;indels=1;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	44938100	44938139	100	-	.	ID=FBgn0031251.1.mrna1.exon1;Name=FBgn0031251.1;Parent=FBgn0031251.1.mrna1;Target=FBgn0031251.1 1 40 +
ChrX	stalkie_big_nohaplotig	exon	44930696	44930840	99	-	.	ID=FBgn0031251.1.mrna1.exon2;Name=FBgn0031251.1;Parent=FBgn0031251.1.mrna1;Target=FBgn0031251.1 41 186 +
ChrX	stalkie_big_nohaplotig	exon	44926791	44927699	100	-	.	ID=FBgn0031251.1.mrna1.exon3;Name=FBgn0031251.1;Parent=FBgn0031251.1.mrna1;Target=FBgn0031251.1 187 1095 +
ChrX	stalkie_big_nohaplotig	exon	44923088	44925205	100	-	.	ID=FBgn0031251.1.mrna1.exon4;Name=FBgn0031251.1;Parent=FBgn0031251.1.mrna1;Target=FBgn0031251.1 1096 3213 +
ChrX	stalkie_big_nohaplotig	CDS	44938100	44938137	100	-	0	ID=FBgn0031251.1.mrna1.cds1;Name=FBgn0031251.1;Parent=FBgn0031251.1.mrna1;Target=FBgn0031251.1 3 40 +
ChrX	stalkie_big_nohaplotig	CDS	44930826	44930840	93	-	2	ID=FBgn0031251.1.mrna1.cds2;Name=FBgn0031251.1;Parent=FBgn0031251.1.mrna1;Target=FBgn0031251.1 41 56 +
Chr2	stalkie_big_nohaplotig	mRNA	113783785	113785585	.	-	.	ID=FBgn0039286.1.mrna1;Name=FBgn0039286.1;Parent=FBgn0039286.1.path1;Dir=indeterminatecoverage=99.7;identity=99.4;matches=1791;mismatches=10;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	113783785	113785585	99	-	.	ID=FBgn0039286.1.mrna1.exon1;Name=FBgn0039286.1;Parent=FBgn0039286.1.mrna1;Target=FBgn0039286.1 1806 6 .
Chr2	stalkie_big_nohaplotig	CDS	113783785	113785584	99	-	0	ID=FBgn0039286.1.mrna1.cds1;Name=FBgn0039286.1;Parent=FBgn0039286.1.mrna1;Target=FBgn0039286.1 1806 7 .
Chr2	stalkie_big_nohaplotig	mRNA	113778979	113847666	.	+	.	ID=FBgn0083946.1.mrna1;Name=FBgn0083946.1;Parent=FBgn0083946.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=2670;mismatches=9;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	113778979	113779404	100	+	.	ID=FBgn0083946.1.mrna1.exon1;Name=FBgn0083946.1;Parent=FBgn0083946.1.mrna1;Target=FBgn0083946.1 1 426 +
Chr2	stalkie_big_nohaplotig	exon	113779471	113779599	99	+	.	ID=FBgn0083946.1.mrna1.exon2;Name=FBgn0083946.1;Parent=FBgn0083946.1.mrna1;Target=FBgn0083946.1 427 555 +
Chr2	stalkie_big_nohaplotig	exon	113844115	113844474	99	+	.	ID=FBgn0083946.1.mrna1.exon3;Name=FBgn0083946.1;Parent=FBgn0083946.1.mrna1;Target=FBgn0083946.1 556 915 +
Chr2	stalkie_big_nohaplotig	exon	113844764	113845469	99	+	.	ID=FBgn0083946.1.mrna1.exon4;Name=FBgn0083946.1;Parent=FBgn0083946.1.mrna1;Target=FBgn0083946.1 916 1621 +
Chr2	stalkie_big_nohaplotig	exon	113845529	113845710	100	+	.	ID=FBgn0083946.1.mrna1.exon5;Name=FBgn0083946.1;Parent=FBgn0083946.1.mrna1;Target=FBgn0083946.1 1622 1803 +
Chr2	stalkie_big_nohaplotig	exon	113845828	113846040	99	+	.	ID=FBgn0083946.1.mrna1.exon6;Name=FBgn0083946.1;Parent=FBgn0083946.1.mrna1;Target=FBgn0083946.1 1804 2016 +
Chr2	stalkie_big_nohaplotig	exon	113846104	113846325	99	+	.	ID=FBgn0083946.1.mrna1.exon7;Name=FBgn0083946.1;Parent=FBgn0083946.1.mrna1;Target=FBgn0083946.1 2017 2238 +
Chr2	stalkie_big_nohaplotig	exon	113847153	113847341	100	+	.	ID=FBgn0083946.1.mrna1.exon8;Name=FBgn0083946.1;Parent=FBgn0083946.1.mrna1;Target=FBgn0083946.1 2239 2427 +
Chr2	stalkie_big_nohaplotig	exon	113847415	113847666	99	+	.	ID=FBgn0083946.1.mrna1.exon9;Name=FBgn0083946.1;Parent=FBgn0083946.1.mrna1;Target=FBgn0083946.1 2428 2679 +
Chr2	stalkie_big_nohaplotig	CDS	113778979	113779404	100	+	0	ID=FBgn0083946.1.mrna1.cds1;Name=FBgn0083946.1;Parent=FBgn0083946.1.mrna1;Target=FBgn0083946.1 1 426 +
Chr2	stalkie_big_nohaplotig	CDS	113779471	113779599	99	+	0	ID=FBgn0083946.1.mrna1.cds2;Name=FBgn0083946.1;Parent=FBgn0083946.1.mrna1;Target=FBgn0083946.1 427 555 +
Chr2	stalkie_big_nohaplotig	CDS	113844115	113844474	99	+	0	ID=FBgn0083946.1.mrna1.cds3;Name=FBgn0083946.1;Parent=FBgn0083946.1.mrna1;Target=FBgn0083946.1 556 915 +
Chr2	stalkie_big_nohaplotig	CDS	113844764	113845469	99	+	0	ID=FBgn0083946.1.mrna1.cds4;Name=FBgn0083946.1;Parent=FBgn0083946.1.mrna1;Target=FBgn0083946.1 916 1621 +
Chr2	stalkie_big_nohaplotig	CDS	113845529	113845710	100	+	1	ID=FBgn0083946.1.mrna1.cds5;Name=FBgn0083946.1;Parent=FBgn0083946.1.mrna1;Target=FBgn0083946.1 1622 1803 +
Chr2	stalkie_big_nohaplotig	CDS	113845828	113846040	99	+	0	ID=FBgn0083946.1.mrna1.cds6;Name=FBgn0083946.1;Parent=FBgn0083946.1.mrna1;Target=FBgn0083946.1 1804 2016 +
Chr2	stalkie_big_nohaplotig	CDS	113846104	113846325	99	+	0	ID=FBgn0083946.1.mrna1.cds7;Name=FBgn0083946.1;Parent=FBgn0083946.1.mrna1;Target=FBgn0083946.1 2017 2238 +
Chr2	stalkie_big_nohaplotig	CDS	113847153	113847341	100	+	0	ID=FBgn0083946.1.mrna1.cds8;Name=FBgn0083946.1;Parent=FBgn0083946.1.mrna1;Target=FBgn0083946.1 2239 2427 +
Chr2	stalkie_big_nohaplotig	CDS	113847415	113847666	99	+	0	ID=FBgn0083946.1.mrna1.cds9;Name=FBgn0083946.1;Parent=FBgn0083946.1.mrna1;Target=FBgn0083946.1 2428 2679 +
Chr2	stalkie_big_nohaplotig	mRNA	86734730	86736144	.	-	.	ID=FBgn0051300.3.mrna1;Name=FBgn0051300.3;Parent=FBgn0051300.3.path1;Dir=sensecoverage=100.0;identity=99.9;matches=833;mismatches=0;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	86736023	86736144	100	-	.	ID=FBgn0051300.3.mrna1.exon1;Name=FBgn0051300.3;Parent=FBgn0051300.3.mrna1;Target=FBgn0051300.3 1 122 +
Chr2	stalkie_big_nohaplotig	exon	86735394	86735559	100	-	.	ID=FBgn0051300.3.mrna1.exon2;Name=FBgn0051300.3;Parent=FBgn0051300.3.mrna1;Target=FBgn0051300.3 123 288 +
Chr2	stalkie_big_nohaplotig	exon	86734807	86735335	100	-	.	ID=FBgn0051300.3.mrna1.exon3;Name=FBgn0051300.3;Parent=FBgn0051300.3.mrna1;Target=FBgn0051300.3 289 817 +
Chr2	stalkie_big_nohaplotig	exon	86734730	86734745	94	-	.	ID=FBgn0051300.3.mrna1.exon4;Name=FBgn0051300.3;Parent=FBgn0051300.3.mrna1;Target=FBgn0051300.3 818 834 +
Chr2	stalkie_big_nohaplotig	CDS	86736023	86736144	100	-	0	ID=FBgn0051300.3.mrna1.cds1;Name=FBgn0051300.3;Parent=FBgn0051300.3.mrna1;Target=FBgn0051300.3 1 122 +
Chr2	stalkie_big_nohaplotig	CDS	86735394	86735559	100	-	2	ID=FBgn0051300.3.mrna1.cds2;Name=FBgn0051300.3;Parent=FBgn0051300.3.mrna1;Target=FBgn0051300.3 123 288 +
Chr2	stalkie_big_nohaplotig	CDS	86734807	86735335	100	-	0	ID=FBgn0051300.3.mrna1.cds3;Name=FBgn0051300.3;Parent=FBgn0051300.3.mrna1;Target=FBgn0051300.3 289 817 +
Chr2	stalkie_big_nohaplotig	CDS	86734730	86734745	94	-	1	ID=FBgn0051300.3.mrna1.cds4;Name=FBgn0051300.3;Parent=FBgn0051300.3.mrna1;Target=FBgn0051300.3 818 834 +
Chr2	stalkie_big_nohaplotig	mRNA	37176737	37178015	.	+	.	ID=FBgn0041706.1.mrna1;Name=FBgn0041706.1;Parent=FBgn0041706.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1166;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	37176737	37177554	99	+	.	ID=FBgn0041706.1.mrna1.exon1;Name=FBgn0041706.1;Parent=FBgn0041706.1.mrna1;Target=FBgn0041706.1 1 818 +
Chr2	stalkie_big_nohaplotig	exon	37177608	37177761	100	+	.	ID=FBgn0041706.1.mrna1.exon2;Name=FBgn0041706.1;Parent=FBgn0041706.1.mrna1;Target=FBgn0041706.1 819 972 +
Chr2	stalkie_big_nohaplotig	exon	37177821	37178015	100	+	.	ID=FBgn0041706.1.mrna1.exon3;Name=FBgn0041706.1;Parent=FBgn0041706.1.mrna1;Target=FBgn0041706.1 973 1167 +
Chr2	stalkie_big_nohaplotig	CDS	37176737	37177554	99	+	0	ID=FBgn0041706.1.mrna1.cds1;Name=FBgn0041706.1;Parent=FBgn0041706.1.mrna1;Target=FBgn0041706.1 1 818 +
Chr2	stalkie_big_nohaplotig	CDS	37177608	37177761	100	+	2	ID=FBgn0041706.1.mrna1.cds2;Name=FBgn0041706.1;Parent=FBgn0041706.1.mrna1;Target=FBgn0041706.1 819 972 +
Chr2	stalkie_big_nohaplotig	CDS	37177821	37178015	100	+	0	ID=FBgn0041706.1.mrna1.cds3;Name=FBgn0041706.1;Parent=FBgn0041706.1.mrna1;Target=FBgn0041706.1 973 1167 +
Chr2	stalkie_big_nohaplotig	mRNA	37250511	37253871	.	+	.	ID=FBgn0034974.1.mrna1;Name=FBgn0034974.1;Parent=FBgn0034974.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2517;mismatches=6;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	37250511	37250565	100	+	.	ID=FBgn0034974.1.mrna1.exon1;Name=FBgn0034974.1;Parent=FBgn0034974.1.mrna1;Target=FBgn0034974.1 1 55 +
Chr2	stalkie_big_nohaplotig	exon	37251201	37251323	100	+	.	ID=FBgn0034974.1.mrna1.exon2;Name=FBgn0034974.1;Parent=FBgn0034974.1.mrna1;Target=FBgn0034974.1 56 178 +
Chr2	stalkie_big_nohaplotig	exon	37251390	37252179	99	+	.	ID=FBgn0034974.1.mrna1.exon3;Name=FBgn0034974.1;Parent=FBgn0034974.1.mrna1;Target=FBgn0034974.1 179 968 +
Chr2	stalkie_big_nohaplotig	exon	37252243	37252726	100	+	.	ID=FBgn0034974.1.mrna1.exon4;Name=FBgn0034974.1;Parent=FBgn0034974.1.mrna1;Target=FBgn0034974.1 969 1452 +
Chr2	stalkie_big_nohaplotig	exon	37252801	37253871	99	+	.	ID=FBgn0034974.1.mrna1.exon5;Name=FBgn0034974.1;Parent=FBgn0034974.1.mrna1;Target=FBgn0034974.1 1453 2523 +
Chr2	stalkie_big_nohaplotig	CDS	37250511	37250565	100	+	0	ID=FBgn0034974.1.mrna1.cds1;Name=FBgn0034974.1;Parent=FBgn0034974.1.mrna1;Target=FBgn0034974.1 1 55 +
Chr2	stalkie_big_nohaplotig	CDS	37251201	37251323	100	+	1	ID=FBgn0034974.1.mrna1.cds2;Name=FBgn0034974.1;Parent=FBgn0034974.1.mrna1;Target=FBgn0034974.1 56 178 +
Chr2	stalkie_big_nohaplotig	CDS	37251390	37252179	99	+	1	ID=FBgn0034974.1.mrna1.cds3;Name=FBgn0034974.1;Parent=FBgn0034974.1.mrna1;Target=FBgn0034974.1 179 968 +
Chr2	stalkie_big_nohaplotig	CDS	37252243	37252726	100	+	2	ID=FBgn0034974.1.mrna1.cds4;Name=FBgn0034974.1;Parent=FBgn0034974.1.mrna1;Target=FBgn0034974.1 969 1452 +
Chr2	stalkie_big_nohaplotig	CDS	37252801	37253871	99	+	0	ID=FBgn0034974.1.mrna1.cds5;Name=FBgn0034974.1;Parent=FBgn0034974.1.mrna1;Target=FBgn0034974.1 1453 2523 +
Chr1	stalkie_big_nohaplotig	mRNA	65728919	65733000	.	-	.	ID=FBgn0036931.1.mrna1;Name=FBgn0036931.1;Parent=FBgn0036931.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2615;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	65732256	65733000	99	-	.	ID=FBgn0036931.1.mrna1.exon1;Name=FBgn0036931.1;Parent=FBgn0036931.1.mrna1;Target=FBgn0036931.1 1 745 +
Chr1	stalkie_big_nohaplotig	exon	65731873	65732203	100	-	.	ID=FBgn0036931.1.mrna1.exon2;Name=FBgn0036931.1;Parent=FBgn0036931.1.mrna1;Target=FBgn0036931.1 746 1076 +
Chr1	stalkie_big_nohaplotig	exon	65731499	65731773	100	-	.	ID=FBgn0036931.1.mrna1.exon3;Name=FBgn0036931.1;Parent=FBgn0036931.1.mrna1;Target=FBgn0036931.1 1077 1351 +
Chr1	stalkie_big_nohaplotig	exon	65731010	65731166	99	-	.	ID=FBgn0036931.1.mrna1.exon4;Name=FBgn0036931.1;Parent=FBgn0036931.1.mrna1;Target=FBgn0036931.1 1352 1508 +
Chr1	stalkie_big_nohaplotig	exon	65730686	65730955	99	-	.	ID=FBgn0036931.1.mrna1.exon5;Name=FBgn0036931.1;Parent=FBgn0036931.1.mrna1;Target=FBgn0036931.1 1509 1778 +
Chr1	stalkie_big_nohaplotig	exon	65730379	65730536	100	-	.	ID=FBgn0036931.1.mrna1.exon6;Name=FBgn0036931.1;Parent=FBgn0036931.1.mrna1;Target=FBgn0036931.1 1779 1936 +
Chr1	stalkie_big_nohaplotig	exon	65729081	65729664	100	-	.	ID=FBgn0036931.1.mrna1.exon7;Name=FBgn0036931.1;Parent=FBgn0036931.1.mrna1;Target=FBgn0036931.1 1937 2520 +
Chr1	stalkie_big_nohaplotig	exon	65728919	65729017	100	-	.	ID=FBgn0036931.1.mrna1.exon8;Name=FBgn0036931.1;Parent=FBgn0036931.1.mrna1;Target=FBgn0036931.1 2521 2619 +
Chr1	stalkie_big_nohaplotig	CDS	65732256	65733000	99	-	0	ID=FBgn0036931.1.mrna1.cds1;Name=FBgn0036931.1;Parent=FBgn0036931.1.mrna1;Target=FBgn0036931.1 1 745 +
Chr1	stalkie_big_nohaplotig	CDS	65731873	65732203	100	-	1	ID=FBgn0036931.1.mrna1.cds2;Name=FBgn0036931.1;Parent=FBgn0036931.1.mrna1;Target=FBgn0036931.1 746 1076 +
Chr1	stalkie_big_nohaplotig	CDS	65731499	65731773	100	-	2	ID=FBgn0036931.1.mrna1.cds3;Name=FBgn0036931.1;Parent=FBgn0036931.1.mrna1;Target=FBgn0036931.1 1077 1351 +
Chr1	stalkie_big_nohaplotig	CDS	65731010	65731166	99	-	1	ID=FBgn0036931.1.mrna1.cds4;Name=FBgn0036931.1;Parent=FBgn0036931.1.mrna1;Target=FBgn0036931.1 1352 1508 +
Chr1	stalkie_big_nohaplotig	CDS	65730686	65730955	99	-	2	ID=FBgn0036931.1.mrna1.cds5;Name=FBgn0036931.1;Parent=FBgn0036931.1.mrna1;Target=FBgn0036931.1 1509 1778 +
Chr1	stalkie_big_nohaplotig	CDS	65730379	65730536	100	-	2	ID=FBgn0036931.1.mrna1.cds6;Name=FBgn0036931.1;Parent=FBgn0036931.1.mrna1;Target=FBgn0036931.1 1779 1936 +
Chr1	stalkie_big_nohaplotig	CDS	65729081	65729664	100	-	1	ID=FBgn0036931.1.mrna1.cds7;Name=FBgn0036931.1;Parent=FBgn0036931.1.mrna1;Target=FBgn0036931.1 1937 2520 +
Chr1	stalkie_big_nohaplotig	CDS	65728919	65729017	100	-	0	ID=FBgn0036931.1.mrna1.cds8;Name=FBgn0036931.1;Parent=FBgn0036931.1.mrna1;Target=FBgn0036931.1 2521 2619 +
ChrX	stalkie_big_nohaplotig	mRNA	47162505	47169482	.	+	.	ID=FBgn0000392.1.mrna1;Name=FBgn0000392.1;Parent=FBgn0000392.1.path1;Dir=sensecoverage=99.7;identity=100.0;matches=3586;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	47162505	47162948	100	+	.	ID=FBgn0000392.1.mrna1.exon1;Name=FBgn0000392.1;Parent=FBgn0000392.1.mrna1;Target=FBgn0000392.1 1 444 +
ChrX	stalkie_big_nohaplotig	exon	47165415	47166323	100	+	.	ID=FBgn0000392.1.mrna1.exon2;Name=FBgn0000392.1;Parent=FBgn0000392.1.mrna1;Target=FBgn0000392.1 445 1353 +
ChrX	stalkie_big_nohaplotig	exon	47166393	47166902	100	+	.	ID=FBgn0000392.1.mrna1.exon3;Name=FBgn0000392.1;Parent=FBgn0000392.1.mrna1;Target=FBgn0000392.1 1354 1863 +
ChrX	stalkie_big_nohaplotig	exon	47167466	47168315	100	+	.	ID=FBgn0000392.1.mrna1.exon4;Name=FBgn0000392.1;Parent=FBgn0000392.1.mrna1;Target=FBgn0000392.1 1864 2713 +
ChrX	stalkie_big_nohaplotig	exon	47168610	47169482	100	+	.	ID=FBgn0000392.1.mrna1.exon5;Name=FBgn0000392.1;Parent=FBgn0000392.1.mrna1;Target=FBgn0000392.1 2714 3586 +
ChrX	stalkie_big_nohaplotig	CDS	47162505	47162948	100	+	0	ID=FBgn0000392.1.mrna1.cds1;Name=FBgn0000392.1;Parent=FBgn0000392.1.mrna1;Target=FBgn0000392.1 1 444 +
ChrX	stalkie_big_nohaplotig	CDS	47165415	47166323	100	+	0	ID=FBgn0000392.1.mrna1.cds2;Name=FBgn0000392.1;Parent=FBgn0000392.1.mrna1;Target=FBgn0000392.1 445 1353 +
ChrX	stalkie_big_nohaplotig	CDS	47166393	47166902	100	+	0	ID=FBgn0000392.1.mrna1.cds3;Name=FBgn0000392.1;Parent=FBgn0000392.1.mrna1;Target=FBgn0000392.1 1354 1863 +
ChrX	stalkie_big_nohaplotig	CDS	47167466	47168315	100	+	0	ID=FBgn0000392.1.mrna1.cds4;Name=FBgn0000392.1;Parent=FBgn0000392.1.mrna1;Target=FBgn0000392.1 1864 2713 +
ChrX	stalkie_big_nohaplotig	CDS	47168610	47169481	100	+	1	ID=FBgn0000392.1.mrna1.cds5;Name=FBgn0000392.1;Parent=FBgn0000392.1.mrna1;Target=FBgn0000392.1 2714 3585 +
Chr1	stalkie_big_nohaplotig	mRNA	65772964	65773689	.	+	.	ID=FBgn0261933.1.mrna1;Name=FBgn0261933.1;Parent=FBgn0261933.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=374;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	65772964	65772980	100	+	.	ID=FBgn0261933.1.mrna1.exon1;Name=FBgn0261933.1;Parent=FBgn0261933.1.mrna1;Target=FBgn0261933.1 1 17 +
Chr1	stalkie_big_nohaplotig	exon	65773332	65773689	99	+	.	ID=FBgn0261933.1.mrna1.exon2;Name=FBgn0261933.1;Parent=FBgn0261933.1.mrna1;Target=FBgn0261933.1 18 375 +
Chr1	stalkie_big_nohaplotig	CDS	65772964	65772980	100	+	0	ID=FBgn0261933.1.mrna1.cds1;Name=FBgn0261933.1;Parent=FBgn0261933.1.mrna1;Target=FBgn0261933.1 1 17 +
Chr1	stalkie_big_nohaplotig	CDS	65773332	65773689	99	+	2	ID=FBgn0261933.1.mrna1.cds2;Name=FBgn0261933.1;Parent=FBgn0261933.1.mrna1;Target=FBgn0261933.1 18 375 +
ChrX	stalkie_big_nohaplotig	mRNA	34899312	34910129	.	+	.	ID=FBgn0010355.1.mrna1;Name=FBgn0010355.1;Parent=FBgn0010355.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=4116;mismatches=6;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	34899312	34899364	94	+	.	ID=FBgn0010355.1.mrna1.exon1;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 1 53 +
ChrX	stalkie_big_nohaplotig	exon	34901149	34901214	98	+	.	ID=FBgn0010355.1.mrna1.exon2;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 54 119 +
ChrX	stalkie_big_nohaplotig	exon	34901921	34902210	99	+	.	ID=FBgn0010355.1.mrna1.exon3;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 120 409 +
ChrX	stalkie_big_nohaplotig	exon	34902562	34902883	100	+	.	ID=FBgn0010355.1.mrna1.exon4;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 410 731 +
ChrX	stalkie_big_nohaplotig	exon	34902938	34903043	100	+	.	ID=FBgn0010355.1.mrna1.exon5;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 732 837 +
ChrX	stalkie_big_nohaplotig	exon	34903117	34903386	100	+	.	ID=FBgn0010355.1.mrna1.exon6;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 838 1107 +
ChrX	stalkie_big_nohaplotig	exon	34903443	34903787	100	+	.	ID=FBgn0010355.1.mrna1.exon7;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 1108 1452 +
ChrX	stalkie_big_nohaplotig	exon	34904743	34905015	100	+	.	ID=FBgn0010355.1.mrna1.exon8;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 1453 1725 +
ChrX	stalkie_big_nohaplotig	exon	34905089	34905174	100	+	.	ID=FBgn0010355.1.mrna1.exon9;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 1726 1811 +
ChrX	stalkie_big_nohaplotig	exon	34905239	34905350	100	+	.	ID=FBgn0010355.1.mrna1.exon10;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 1812 1923 +
ChrX	stalkie_big_nohaplotig	exon	34905427	34906308	99	+	.	ID=FBgn0010355.1.mrna1.exon11;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 1924 2805 +
ChrX	stalkie_big_nohaplotig	exon	34908158	34908442	100	+	.	ID=FBgn0010355.1.mrna1.exon12;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 2806 3090 +
ChrX	stalkie_big_nohaplotig	exon	34908561	34908996	100	+	.	ID=FBgn0010355.1.mrna1.exon13;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 3091 3526 +
ChrX	stalkie_big_nohaplotig	exon	34909413	34909561	100	+	.	ID=FBgn0010355.1.mrna1.exon14;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 3527 3675 +
ChrX	stalkie_big_nohaplotig	exon	34909625	34909961	100	+	.	ID=FBgn0010355.1.mrna1.exon15;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 3676 4012 +
ChrX	stalkie_big_nohaplotig	exon	34910020	34910129	100	+	.	ID=FBgn0010355.1.mrna1.exon16;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 4013 4122 +
ChrX	stalkie_big_nohaplotig	CDS	34899312	34899364	94	+	0	ID=FBgn0010355.1.mrna1.cds1;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 1 53 +
ChrX	stalkie_big_nohaplotig	CDS	34901149	34901214	98	+	2	ID=FBgn0010355.1.mrna1.cds2;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 54 119 +
ChrX	stalkie_big_nohaplotig	CDS	34901921	34902210	99	+	2	ID=FBgn0010355.1.mrna1.cds3;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 120 409 +
ChrX	stalkie_big_nohaplotig	CDS	34902562	34902883	100	+	1	ID=FBgn0010355.1.mrna1.cds4;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 410 731 +
ChrX	stalkie_big_nohaplotig	CDS	34902938	34903043	100	+	2	ID=FBgn0010355.1.mrna1.cds5;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 732 837 +
ChrX	stalkie_big_nohaplotig	CDS	34903117	34903386	100	+	0	ID=FBgn0010355.1.mrna1.cds6;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 838 1107 +
ChrX	stalkie_big_nohaplotig	CDS	34903443	34903787	100	+	0	ID=FBgn0010355.1.mrna1.cds7;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 1108 1452 +
ChrX	stalkie_big_nohaplotig	CDS	34904743	34905015	100	+	0	ID=FBgn0010355.1.mrna1.cds8;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 1453 1725 +
ChrX	stalkie_big_nohaplotig	CDS	34905089	34905174	100	+	0	ID=FBgn0010355.1.mrna1.cds9;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 1726 1811 +
ChrX	stalkie_big_nohaplotig	CDS	34905239	34905350	100	+	2	ID=FBgn0010355.1.mrna1.cds10;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 1812 1923 +
ChrX	stalkie_big_nohaplotig	CDS	34905427	34906308	99	+	0	ID=FBgn0010355.1.mrna1.cds11;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 1924 2805 +
ChrX	stalkie_big_nohaplotig	CDS	34908158	34908442	100	+	0	ID=FBgn0010355.1.mrna1.cds12;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 2806 3090 +
ChrX	stalkie_big_nohaplotig	CDS	34908561	34908996	100	+	0	ID=FBgn0010355.1.mrna1.cds13;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 3091 3526 +
ChrX	stalkie_big_nohaplotig	CDS	34909413	34909561	100	+	1	ID=FBgn0010355.1.mrna1.cds14;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 3527 3675 +
ChrX	stalkie_big_nohaplotig	CDS	34909625	34909961	100	+	0	ID=FBgn0010355.1.mrna1.cds15;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 3676 4012 +
ChrX	stalkie_big_nohaplotig	CDS	34910020	34910129	100	+	1	ID=FBgn0010355.1.mrna1.cds16;Name=FBgn0010355.1;Parent=FBgn0010355.1.mrna1;Target=FBgn0010355.1 4013 4122 +
Chr2	stalkie_big_nohaplotig	mRNA	128371127	128378850	.	-	.	ID=FBgn0037234.1.mrna1;Name=FBgn0037234.1;Parent=FBgn0037234.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1826;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	128378692	128378850	99	-	.	ID=FBgn0037234.1.mrna1.exon1;Name=FBgn0037234.1;Parent=FBgn0037234.1.mrna1;Target=FBgn0037234.1 1 159 +
Chr2	stalkie_big_nohaplotig	exon	128378410	128378624	100	-	.	ID=FBgn0037234.1.mrna1.exon2;Name=FBgn0037234.1;Parent=FBgn0037234.1.mrna1;Target=FBgn0037234.1 160 374 +
Chr2	stalkie_big_nohaplotig	exon	128375566	128375762	100	-	.	ID=FBgn0037234.1.mrna1.exon3;Name=FBgn0037234.1;Parent=FBgn0037234.1.mrna1;Target=FBgn0037234.1 375 571 +
Chr2	stalkie_big_nohaplotig	exon	128375049	128375192	100	-	.	ID=FBgn0037234.1.mrna1.exon4;Name=FBgn0037234.1;Parent=FBgn0037234.1.mrna1;Target=FBgn0037234.1 572 715 +
Chr2	stalkie_big_nohaplotig	exon	128374850	128374934	100	-	.	ID=FBgn0037234.1.mrna1.exon5;Name=FBgn0037234.1;Parent=FBgn0037234.1.mrna1;Target=FBgn0037234.1 716 800 +
Chr2	stalkie_big_nohaplotig	exon	128374700	128374781	100	-	.	ID=FBgn0037234.1.mrna1.exon6;Name=FBgn0037234.1;Parent=FBgn0037234.1.mrna1;Target=FBgn0037234.1 801 882 +
Chr2	stalkie_big_nohaplotig	exon	128373968	128374638	100	-	.	ID=FBgn0037234.1.mrna1.exon7;Name=FBgn0037234.1;Parent=FBgn0037234.1.mrna1;Target=FBgn0037234.1 883 1553 +
Chr2	stalkie_big_nohaplotig	exon	128371127	128371400	100	-	.	ID=FBgn0037234.1.mrna1.exon8;Name=FBgn0037234.1;Parent=FBgn0037234.1.mrna1;Target=FBgn0037234.1 1554 1827 +
Chr2	stalkie_big_nohaplotig	CDS	128378692	128378850	99	-	0	ID=FBgn0037234.1.mrna1.cds1;Name=FBgn0037234.1;Parent=FBgn0037234.1.mrna1;Target=FBgn0037234.1 1 159 +
Chr2	stalkie_big_nohaplotig	CDS	128378410	128378624	100	-	0	ID=FBgn0037234.1.mrna1.cds2;Name=FBgn0037234.1;Parent=FBgn0037234.1.mrna1;Target=FBgn0037234.1 160 374 +
Chr2	stalkie_big_nohaplotig	CDS	128375566	128375762	100	-	2	ID=FBgn0037234.1.mrna1.cds3;Name=FBgn0037234.1;Parent=FBgn0037234.1.mrna1;Target=FBgn0037234.1 375 571 +
Chr2	stalkie_big_nohaplotig	CDS	128375049	128375192	100	-	1	ID=FBgn0037234.1.mrna1.cds4;Name=FBgn0037234.1;Parent=FBgn0037234.1.mrna1;Target=FBgn0037234.1 572 715 +
Chr2	stalkie_big_nohaplotig	CDS	128374850	128374934	100	-	1	ID=FBgn0037234.1.mrna1.cds5;Name=FBgn0037234.1;Parent=FBgn0037234.1.mrna1;Target=FBgn0037234.1 716 800 +
Chr2	stalkie_big_nohaplotig	CDS	128374700	128374781	100	-	2	ID=FBgn0037234.1.mrna1.cds6;Name=FBgn0037234.1;Parent=FBgn0037234.1.mrna1;Target=FBgn0037234.1 801 882 +
Chr2	stalkie_big_nohaplotig	CDS	128373968	128374638	100	-	0	ID=FBgn0037234.1.mrna1.cds7;Name=FBgn0037234.1;Parent=FBgn0037234.1.mrna1;Target=FBgn0037234.1 883 1553 +
Chr2	stalkie_big_nohaplotig	CDS	128371127	128371400	100	-	2	ID=FBgn0037234.1.mrna1.cds8;Name=FBgn0037234.1;Parent=FBgn0037234.1.mrna1;Target=FBgn0037234.1 1554 1827 +
Chr2	stalkie_big_nohaplotig	mRNA	128403797	128407123	.	+	.	ID=ORF3218.mrna1;Name=ORF3218;Parent=ORF3218.path1;Dir=sensecoverage=100.0;identity=99.9;matches=755;mismatches=0;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	128403797	128403963	99	+	.	ID=ORF3218.mrna1.exon1;Name=ORF3218;Parent=ORF3218.mrna1;Target=ORF3218 1 168 +
Chr2	stalkie_big_nohaplotig	exon	128404043	128404234	100	+	.	ID=ORF3218.mrna1.exon2;Name=ORF3218;Parent=ORF3218.mrna1;Target=ORF3218 169 360 +
Chr2	stalkie_big_nohaplotig	exon	128406728	128407123	100	+	.	ID=ORF3218.mrna1.exon3;Name=ORF3218;Parent=ORF3218.mrna1;Target=ORF3218 361 756 +
Chr2	stalkie_big_nohaplotig	CDS	128403799	128403812	93	+	0	ID=ORF3218.mrna1.cds1;Name=ORF3218;Parent=ORF3218.mrna1;Target=ORF3218 3 17 +
Chr2	stalkie_big_nohaplotig	mRNA	119396679	119402253	.	+	.	ID=ORF3033.mrna1;Name=ORF3033;Parent=ORF3033.path1;Dir=sensecoverage=94.0;identity=98.4;matches=718;mismatches=0;indels=12;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	119396679	119396925	100	+	.	ID=ORF3033.mrna1.exon1;Name=ORF3033;Parent=ORF3033.mrna1;Target=ORF3033 1 247 +
Chr2	stalkie_big_nohaplotig	exon	119399208	119399657	97	+	.	ID=ORF3033.mrna1.exon2;Name=ORF3033;Parent=ORF3033.mrna1;Target=ORF3033 248 709 +
Chr2	stalkie_big_nohaplotig	exon	119402233	119402253	100	+	.	ID=ORF3033.mrna1.exon3;Name=ORF3033;Parent=ORF3033.mrna1;Target=ORF3033 710 730 +
Chr2	stalkie_big_nohaplotig	CDS	119396679	119396925	100	+	0	ID=ORF3033.mrna1.cds1;Name=ORF3033;Parent=ORF3033.mrna1;Target=ORF3033 1 247 +
Chr2	stalkie_big_nohaplotig	CDS	119399208	119399657	97	+	1	ID=ORF3033.mrna1.cds2;Name=ORF3033;Parent=ORF3033.mrna1;Target=ORF3033 248 709 +
Chr2	stalkie_big_nohaplotig	CDS	119402233	119402252	100	+	1	ID=ORF3033.mrna1.cds3;Name=ORF3033;Parent=ORF3033.mrna1;Target=ORF3033 710 729 +
Chr2	stalkie_big_nohaplotig	mRNA	75873476	75873901	.	+	.	ID=FBgn0000044.mrna1;Name=FBgn0000044;Parent=FBgn0000044.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=426;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	75873476	75873901	100	+	.	ID=FBgn0000044.mrna1.exon1;Name=FBgn0000044;Parent=FBgn0000044.mrna1;Target=FBgn0000044 426 1 .
Chr2	stalkie_big_nohaplotig	CDS	75873476	75873901	100	+	0	ID=FBgn0000044.mrna1.cds1;Name=FBgn0000044;Parent=FBgn0000044.mrna1;Target=FBgn0000044 426 1 .
Chr2	stalkie_big_nohaplotig	mRNA	75873893	75874591	.	+	.	ID=FBgn0000047.mrna1;Name=FBgn0000047;Parent=FBgn0000047.path1;Dir=sensecoverage=100.0;identity=100.0;matches=642;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	75873893	75874331	100	+	.	ID=FBgn0000047.mrna1.exon1;Name=FBgn0000047;Parent=FBgn0000047.mrna1;Target=FBgn0000047 1 439 +
Chr2	stalkie_big_nohaplotig	exon	75874389	75874591	100	+	.	ID=FBgn0000047.mrna1.exon2;Name=FBgn0000047;Parent=FBgn0000047.mrna1;Target=FBgn0000047 440 642 +
Chr2	stalkie_big_nohaplotig	CDS	75873893	75874331	100	+	0	ID=FBgn0000047.mrna1.cds1;Name=FBgn0000047;Parent=FBgn0000047.mrna1;Target=FBgn0000047 1 439 +
Chr2	stalkie_big_nohaplotig	CDS	75874389	75874591	100	+	1	ID=FBgn0000047.mrna1.cds2;Name=FBgn0000047;Parent=FBgn0000047.mrna1;Target=FBgn0000047 440 642 +
Chr2	stalkie_big_nohaplotig	mRNA	53797639	53799012	.	-	.	ID=ORF869.mrna1;Name=ORF869;Parent=ORF869.path1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1363;mismatches=11;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	53797639	53799012	99	-	.	ID=ORF869.mrna1.exon1;Name=ORF869;Parent=ORF869.mrna1;Target=ORF869 1374 1 .
Chr2	stalkie_big_nohaplotig	CDS	53797639	53799012	99	-	0	ID=ORF869.mrna1.cds1;Name=ORF869;Parent=ORF869.mrna1;Target=ORF869 1374 1 .
Chr2	stalkie_big_nohaplotig	mRNA	4205004	4207363	.	-	.	ID=FBgn0000008.mrna1;Name=FBgn0000008;Parent=FBgn0000008.path1;Dir=sensecoverage=100.0;identity=99.6;matches=2223;mismatches=9;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	4206006	4207363	99	-	.	ID=FBgn0000008.mrna1.exon1;Name=FBgn0000008;Parent=FBgn0000008.mrna1;Target=FBgn0000008 1 1358 +
Chr2	stalkie_big_nohaplotig	exon	4205004	4205877	99	-	.	ID=FBgn0000008.mrna1.exon2;Name=FBgn0000008;Parent=FBgn0000008.mrna1;Target=FBgn0000008 1359 2232 +
Chr2	stalkie_big_nohaplotig	CDS	4206006	4207363	99	-	0	ID=FBgn0000008.mrna1.cds1;Name=FBgn0000008;Parent=FBgn0000008.mrna1;Target=FBgn0000008 1 1358 +
Chr2	stalkie_big_nohaplotig	CDS	4205004	4205877	99	-	2	ID=FBgn0000008.mrna1.cds2;Name=FBgn0000008;Parent=FBgn0000008.mrna1;Target=FBgn0000008 1359 2232 +
Chr1	stalkie_big_nohaplotig	mRNA	154760573	154775741	.	+	.	ID=FBgn0003189.1.mrna1;Name=FBgn0003189.1;Parent=FBgn0003189.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=6663;mismatches=36;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	154760573	154761563	99	+	.	ID=FBgn0003189.1.mrna1.exon1;Name=FBgn0003189.1;Parent=FBgn0003189.1.mrna1;Target=FBgn0003189.1 1 991 +
Chr1	stalkie_big_nohaplotig	exon	154761628	154764626	99	+	.	ID=FBgn0003189.1.mrna1.exon2;Name=FBgn0003189.1;Parent=FBgn0003189.1.mrna1;Target=FBgn0003189.1 992 3990 +
Chr1	stalkie_big_nohaplotig	exon	154764686	154764790	100	+	.	ID=FBgn0003189.1.mrna1.exon3;Name=FBgn0003189.1;Parent=FBgn0003189.1.mrna1;Target=FBgn0003189.1 3991 4095 +
Chr1	stalkie_big_nohaplotig	exon	154772883	154773022	100	+	.	ID=FBgn0003189.1.mrna1.exon4;Name=FBgn0003189.1;Parent=FBgn0003189.1.mrna1;Target=FBgn0003189.1 4096 4235 +
Chr1	stalkie_big_nohaplotig	exon	154773095	154773366	100	+	.	ID=FBgn0003189.1.mrna1.exon5;Name=FBgn0003189.1;Parent=FBgn0003189.1.mrna1;Target=FBgn0003189.1 4236 4507 +
Chr1	stalkie_big_nohaplotig	exon	154773426	154775035	99	+	.	ID=FBgn0003189.1.mrna1.exon6;Name=FBgn0003189.1;Parent=FBgn0003189.1.mrna1;Target=FBgn0003189.1 4508 6117 +
Chr1	stalkie_big_nohaplotig	exon	154775097	154775480	99	+	.	ID=FBgn0003189.1.mrna1.exon7;Name=FBgn0003189.1;Parent=FBgn0003189.1.mrna1;Target=FBgn0003189.1 6118 6501 +
Chr1	stalkie_big_nohaplotig	exon	154775544	154775741	100	+	.	ID=FBgn0003189.1.mrna1.exon8;Name=FBgn0003189.1;Parent=FBgn0003189.1.mrna1;Target=FBgn0003189.1 6502 6699 +
Chr1	stalkie_big_nohaplotig	CDS	154760573	154761563	99	+	0	ID=FBgn0003189.1.mrna1.cds1;Name=FBgn0003189.1;Parent=FBgn0003189.1.mrna1;Target=FBgn0003189.1 1 991 +
Chr1	stalkie_big_nohaplotig	CDS	154761628	154764626	99	+	1	ID=FBgn0003189.1.mrna1.cds2;Name=FBgn0003189.1;Parent=FBgn0003189.1.mrna1;Target=FBgn0003189.1 992 3990 +
Chr1	stalkie_big_nohaplotig	CDS	154764686	154764790	100	+	0	ID=FBgn0003189.1.mrna1.cds3;Name=FBgn0003189.1;Parent=FBgn0003189.1.mrna1;Target=FBgn0003189.1 3991 4095 +
Chr1	stalkie_big_nohaplotig	CDS	154772883	154773022	100	+	0	ID=FBgn0003189.1.mrna1.cds4;Name=FBgn0003189.1;Parent=FBgn0003189.1.mrna1;Target=FBgn0003189.1 4096 4235 +
Chr1	stalkie_big_nohaplotig	CDS	154773095	154773366	100	+	2	ID=FBgn0003189.1.mrna1.cds5;Name=FBgn0003189.1;Parent=FBgn0003189.1.mrna1;Target=FBgn0003189.1 4236 4507 +
Chr1	stalkie_big_nohaplotig	CDS	154773426	154775035	99	+	1	ID=FBgn0003189.1.mrna1.cds6;Name=FBgn0003189.1;Parent=FBgn0003189.1.mrna1;Target=FBgn0003189.1 4508 6117 +
Chr1	stalkie_big_nohaplotig	CDS	154775097	154775480	99	+	0	ID=FBgn0003189.1.mrna1.cds7;Name=FBgn0003189.1;Parent=FBgn0003189.1.mrna1;Target=FBgn0003189.1 6118 6501 +
Chr1	stalkie_big_nohaplotig	CDS	154775544	154775741	100	+	0	ID=FBgn0003189.1.mrna1.cds8;Name=FBgn0003189.1;Parent=FBgn0003189.1.mrna1;Target=FBgn0003189.1 6502 6699 +
Chr2	stalkie_big_nohaplotig	mRNA	25495277	25498209	.	+	.	ID=FBgn0027535.1.mrna1;Name=FBgn0027535.1;Parent=FBgn0027535.1.path1;Dir=sensecoverage=99.9;identity=100.0;matches=2556;mismatches=0;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	25495277	25496893	99	+	.	ID=FBgn0027535.1.mrna1.exon1;Name=FBgn0027535.1;Parent=FBgn0027535.1.mrna1;Target=FBgn0027535.1 3 1620 +
Chr2	stalkie_big_nohaplotig	exon	25496958	25497794	100	+	.	ID=FBgn0027535.1.mrna1.exon2;Name=FBgn0027535.1;Parent=FBgn0027535.1.mrna1;Target=FBgn0027535.1 1621 2457 +
Chr2	stalkie_big_nohaplotig	exon	25498108	25498209	100	+	.	ID=FBgn0027535.1.mrna1.exon3;Name=FBgn0027535.1;Parent=FBgn0027535.1.mrna1;Target=FBgn0027535.1 2458 2559 +
Chr2	stalkie_big_nohaplotig	CDS	25495277	25495362	98	+	0	ID=FBgn0027535.1.mrna1.cds1;Name=FBgn0027535.1;Parent=FBgn0027535.1.mrna1;Target=FBgn0027535.1 3 89 +
Chr2	stalkie_big_nohaplotig	mRNA	147340292	147348970	.	-	.	ID=FBgn0015240.1.mrna1;Name=FBgn0015240.1;Parent=FBgn0015240.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=2392;mismatches=11;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	147348253	147348970	99	-	.	ID=FBgn0015240.1.mrna1.exon1;Name=FBgn0015240.1;Parent=FBgn0015240.1.mrna1;Target=FBgn0015240.1 1 718 +
Chr2	stalkie_big_nohaplotig	exon	147347128	147348191	99	-	.	ID=FBgn0015240.1.mrna1.exon2;Name=FBgn0015240.1;Parent=FBgn0015240.1.mrna1;Target=FBgn0015240.1 719 1782 +
Chr2	stalkie_big_nohaplotig	exon	147340838	147341044	100	-	.	ID=FBgn0015240.1.mrna1.exon3;Name=FBgn0015240.1;Parent=FBgn0015240.1.mrna1;Target=FBgn0015240.1 1783 1989 +
Chr2	stalkie_big_nohaplotig	exon	147340561	147340773	100	-	.	ID=FBgn0015240.1.mrna1.exon4;Name=FBgn0015240.1;Parent=FBgn0015240.1.mrna1;Target=FBgn0015240.1 1990 2202 +
Chr2	stalkie_big_nohaplotig	exon	147340292	147340492	100	-	.	ID=FBgn0015240.1.mrna1.exon5;Name=FBgn0015240.1;Parent=FBgn0015240.1.mrna1;Target=FBgn0015240.1 2203 2403 +
Chr2	stalkie_big_nohaplotig	CDS	147348253	147348970	99	-	0	ID=FBgn0015240.1.mrna1.cds1;Name=FBgn0015240.1;Parent=FBgn0015240.1.mrna1;Target=FBgn0015240.1 1 718 +
Chr2	stalkie_big_nohaplotig	CDS	147347128	147348191	99	-	1	ID=FBgn0015240.1.mrna1.cds2;Name=FBgn0015240.1;Parent=FBgn0015240.1.mrna1;Target=FBgn0015240.1 719 1782 +
Chr2	stalkie_big_nohaplotig	CDS	147340838	147341044	100	-	0	ID=FBgn0015240.1.mrna1.cds3;Name=FBgn0015240.1;Parent=FBgn0015240.1.mrna1;Target=FBgn0015240.1 1783 1989 +
Chr2	stalkie_big_nohaplotig	CDS	147340561	147340773	100	-	0	ID=FBgn0015240.1.mrna1.cds4;Name=FBgn0015240.1;Parent=FBgn0015240.1.mrna1;Target=FBgn0015240.1 1990 2202 +
Chr2	stalkie_big_nohaplotig	CDS	147340292	147340492	100	-	0	ID=FBgn0015240.1.mrna1.cds5;Name=FBgn0015240.1;Parent=FBgn0015240.1.mrna1;Target=FBgn0015240.1 2203 2403 +
Chr2	stalkie_big_nohaplotig	mRNA	65270936	65310418	.	-	.	ID=AAEL008834.1.mrna1;Name=AAEL008834.1;Parent=AAEL008834.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1093;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	65310212	65310418	99	-	.	ID=AAEL008834.1.mrna1.exon1;Name=AAEL008834.1;Parent=AAEL008834.1.mrna1;Target=AAEL008834.1 1 207 +
Chr2	stalkie_big_nohaplotig	exon	65309949	65310158	99	-	.	ID=AAEL008834.1.mrna1.exon2;Name=AAEL008834.1;Parent=AAEL008834.1.mrna1;Target=AAEL008834.1 208 417 +
Chr2	stalkie_big_nohaplotig	exon	65297095	65297214	100	-	.	ID=AAEL008834.1.mrna1.exon3;Name=AAEL008834.1;Parent=AAEL008834.1.mrna1;Target=AAEL008834.1 418 537 +
Chr2	stalkie_big_nohaplotig	exon	65287575	65287651	100	-	.	ID=AAEL008834.1.mrna1.exon4;Name=AAEL008834.1;Parent=AAEL008834.1.mrna1;Target=AAEL008834.1 538 614 +
Chr2	stalkie_big_nohaplotig	exon	65273463	65273604	100	-	.	ID=AAEL008834.1.mrna1.exon5;Name=AAEL008834.1;Parent=AAEL008834.1.mrna1;Target=AAEL008834.1 615 756 +
Chr2	stalkie_big_nohaplotig	exon	65273180	65273398	100	-	.	ID=AAEL008834.1.mrna1.exon6;Name=AAEL008834.1;Parent=AAEL008834.1.mrna1;Target=AAEL008834.1 757 975 +
Chr2	stalkie_big_nohaplotig	exon	65270936	65271055	100	-	.	ID=AAEL008834.1.mrna1.exon7;Name=AAEL008834.1;Parent=AAEL008834.1.mrna1;Target=AAEL008834.1 976 1095 +
Chr2	stalkie_big_nohaplotig	CDS	65310212	65310418	99	-	0	ID=AAEL008834.1.mrna1.cds1;Name=AAEL008834.1;Parent=AAEL008834.1.mrna1;Target=AAEL008834.1 1 207 +
Chr2	stalkie_big_nohaplotig	CDS	65309949	65310158	99	-	0	ID=AAEL008834.1.mrna1.cds2;Name=AAEL008834.1;Parent=AAEL008834.1.mrna1;Target=AAEL008834.1 208 417 +
Chr2	stalkie_big_nohaplotig	CDS	65297095	65297214	100	-	0	ID=AAEL008834.1.mrna1.cds3;Name=AAEL008834.1;Parent=AAEL008834.1.mrna1;Target=AAEL008834.1 418 537 +
Chr2	stalkie_big_nohaplotig	CDS	65287575	65287651	100	-	0	ID=AAEL008834.1.mrna1.cds4;Name=AAEL008834.1;Parent=AAEL008834.1.mrna1;Target=AAEL008834.1 538 614 +
Chr2	stalkie_big_nohaplotig	CDS	65273463	65273604	100	-	2	ID=AAEL008834.1.mrna1.cds5;Name=AAEL008834.1;Parent=AAEL008834.1.mrna1;Target=AAEL008834.1 615 756 +
Chr2	stalkie_big_nohaplotig	CDS	65273180	65273398	100	-	0	ID=AAEL008834.1.mrna1.cds6;Name=AAEL008834.1;Parent=AAEL008834.1.mrna1;Target=AAEL008834.1 757 975 +
Chr2	stalkie_big_nohaplotig	CDS	65270936	65271055	100	-	0	ID=AAEL008834.1.mrna1.cds7;Name=AAEL008834.1;Parent=AAEL008834.1.mrna1;Target=AAEL008834.1 976 1095 +
Chr1	stalkie_big_nohaplotig	mRNA	102151704	102371159	.	+	.	ID=FBgn0052647.1.mrna1;Name=FBgn0052647.1;Parent=FBgn0052647.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=426;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	102151704	102151779	100	+	.	ID=FBgn0052647.1.mrna1.exon1;Name=FBgn0052647.1;Parent=FBgn0052647.1.mrna1;Target=FBgn0052647.1 1 76 +
Chr1	stalkie_big_nohaplotig	exon	102370688	102370836	100	+	.	ID=FBgn0052647.1.mrna1.exon2;Name=FBgn0052647.1;Parent=FBgn0052647.1.mrna1;Target=FBgn0052647.1 77 225 +
Chr1	stalkie_big_nohaplotig	exon	102370893	102370973	100	+	.	ID=FBgn0052647.1.mrna1.exon3;Name=FBgn0052647.1;Parent=FBgn0052647.1.mrna1;Target=FBgn0052647.1 226 306 +
Chr1	stalkie_big_nohaplotig	exon	102371040	102371159	100	+	.	ID=FBgn0052647.1.mrna1.exon4;Name=FBgn0052647.1;Parent=FBgn0052647.1.mrna1;Target=FBgn0052647.1 307 426 +
Chr1	stalkie_big_nohaplotig	CDS	102151704	102151779	100	+	0	ID=FBgn0052647.1.mrna1.cds1;Name=FBgn0052647.1;Parent=FBgn0052647.1.mrna1;Target=FBgn0052647.1 1 76 +
Chr1	stalkie_big_nohaplotig	CDS	102370688	102370836	100	+	1	ID=FBgn0052647.1.mrna1.cds2;Name=FBgn0052647.1;Parent=FBgn0052647.1.mrna1;Target=FBgn0052647.1 77 225 +
Chr1	stalkie_big_nohaplotig	CDS	102370893	102370973	100	+	0	ID=FBgn0052647.1.mrna1.cds3;Name=FBgn0052647.1;Parent=FBgn0052647.1.mrna1;Target=FBgn0052647.1 226 306 +
Chr1	stalkie_big_nohaplotig	CDS	102371040	102371159	100	+	0	ID=FBgn0052647.1.mrna1.cds4;Name=FBgn0052647.1;Parent=FBgn0052647.1.mrna1;Target=FBgn0052647.1 307 426 +
Chr2	stalkie_big_nohaplotig	mRNA	93248435	93250549	.	-	.	ID=FBgn0038211.4.mrna1;Name=FBgn0038211.4;Parent=FBgn0038211.4.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1494;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	93250271	93250549	100	-	.	ID=FBgn0038211.4.mrna1.exon1;Name=FBgn0038211.4;Parent=FBgn0038211.4.mrna1;Target=FBgn0038211.4 1 279 +
Chr2	stalkie_big_nohaplotig	exon	93249737	93249899	100	-	.	ID=FBgn0038211.4.mrna1.exon2;Name=FBgn0038211.4;Parent=FBgn0038211.4.mrna1;Target=FBgn0038211.4 280 442 +
Chr2	stalkie_big_nohaplotig	exon	93249429	93249679	100	-	.	ID=FBgn0038211.4.mrna1.exon3;Name=FBgn0038211.4;Parent=FBgn0038211.4.mrna1;Target=FBgn0038211.4 443 693 +
Chr2	stalkie_big_nohaplotig	exon	93249193	93249355	100	-	.	ID=FBgn0038211.4.mrna1.exon4;Name=FBgn0038211.4;Parent=FBgn0038211.4.mrna1;Target=FBgn0038211.4 694 856 +
Chr2	stalkie_big_nohaplotig	exon	93248651	93249128	100	-	.	ID=FBgn0038211.4.mrna1.exon5;Name=FBgn0038211.4;Parent=FBgn0038211.4.mrna1;Target=FBgn0038211.4 857 1334 +
Chr2	stalkie_big_nohaplotig	exon	93248435	93248594	100	-	.	ID=FBgn0038211.4.mrna1.exon6;Name=FBgn0038211.4;Parent=FBgn0038211.4.mrna1;Target=FBgn0038211.4 1335 1494 +
Chr2	stalkie_big_nohaplotig	CDS	93250271	93250549	100	-	0	ID=FBgn0038211.4.mrna1.cds1;Name=FBgn0038211.4;Parent=FBgn0038211.4.mrna1;Target=FBgn0038211.4 1 279 +
Chr2	stalkie_big_nohaplotig	CDS	93249737	93249899	100	-	0	ID=FBgn0038211.4.mrna1.cds2;Name=FBgn0038211.4;Parent=FBgn0038211.4.mrna1;Target=FBgn0038211.4 280 442 +
Chr2	stalkie_big_nohaplotig	CDS	93249429	93249679	100	-	1	ID=FBgn0038211.4.mrna1.cds3;Name=FBgn0038211.4;Parent=FBgn0038211.4.mrna1;Target=FBgn0038211.4 443 693 +
Chr2	stalkie_big_nohaplotig	CDS	93249193	93249355	100	-	0	ID=FBgn0038211.4.mrna1.cds4;Name=FBgn0038211.4;Parent=FBgn0038211.4.mrna1;Target=FBgn0038211.4 694 856 +
Chr2	stalkie_big_nohaplotig	CDS	93248651	93249128	100	-	1	ID=FBgn0038211.4.mrna1.cds5;Name=FBgn0038211.4;Parent=FBgn0038211.4.mrna1;Target=FBgn0038211.4 857 1334 +
Chr2	stalkie_big_nohaplotig	CDS	93248435	93248594	100	-	2	ID=FBgn0038211.4.mrna1.cds6;Name=FBgn0038211.4;Parent=FBgn0038211.4.mrna1;Target=FBgn0038211.4 1335 1494 +
Chr2	stalkie_big_nohaplotig	mRNA	26580287	26580898	.	+	.	ID=FBgn0033431.mrna1;Name=FBgn0033431;Parent=FBgn0033431.path1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=610;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	26580287	26580898	99	+	.	ID=FBgn0033431.mrna1.exon1;Name=FBgn0033431;Parent=FBgn0033431.mrna1;Target=FBgn0033431 612 1 .
Chr2	stalkie_big_nohaplotig	CDS	26580287	26580898	99	+	0	ID=FBgn0033431.mrna1.cds1;Name=FBgn0033431;Parent=FBgn0033431.mrna1;Target=FBgn0033431 612 1 .
Chr2	stalkie_big_nohaplotig	mRNA	26532992	26533627	.	-	.	ID=FBgn0050031.1.mrna1;Name=FBgn0050031.1;Parent=FBgn0050031.1.path1;Dir=indeterminatecoverage=96.8;identity=100.0;matches=636;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	26532992	26533627	100	-	.	ID=FBgn0050031.1.mrna1.exon1;Name=FBgn0050031.1;Parent=FBgn0050031.1.mrna1;Target=FBgn0050031.1 657 22 .
Chr2	stalkie_big_nohaplotig	CDS	26532992	26533627	100	-	0	ID=FBgn0050031.1.mrna1.cds1;Name=FBgn0050031.1;Parent=FBgn0050031.1.mrna1;Target=FBgn0050031.1 657 22 .
Chr2	stalkie_big_nohaplotig	mRNA	55724586	55728977	.	+	.	ID=FBgn0005619.mrna1;Name=FBgn0005619;Parent=FBgn0005619.path1;Dir=sensecoverage=92.6;identity=99.3;matches=742;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	55724586	55724748	100	+	.	ID=FBgn0005619.mrna1.exon1;Name=FBgn0005619;Parent=FBgn0005619.mrna1;Target=FBgn0005619 49 211 +
Chr2	stalkie_big_nohaplotig	exon	55728394	55728977	99	+	.	ID=FBgn0005619.mrna1.exon2;Name=FBgn0005619;Parent=FBgn0005619.mrna1;Target=FBgn0005619 212 795 +
Chr2	stalkie_big_nohaplotig	CDS	55724586	55724748	100	+	0	ID=FBgn0005619.mrna1.cds1;Name=FBgn0005619;Parent=FBgn0005619.mrna1;Target=FBgn0005619 49 211 +
Chr2	stalkie_big_nohaplotig	CDS	55728394	55728977	99	+	1	ID=FBgn0005619.mrna1.cds2;Name=FBgn0005619;Parent=FBgn0005619.mrna1;Target=FBgn0005619 212 795 +
Chr1	stalkie_big_nohaplotig	mRNA	127880901	127881565	.	-	.	ID=FBgn0039471.4.mrna1;Name=FBgn0039471.4;Parent=FBgn0039471.4.path1;Dir=indeterminatecoverage=99.4;identity=97.0;matches=645;mismatches=20;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	127880901	127881565	96	-	.	ID=FBgn0039471.4.mrna1.exon1;Name=FBgn0039471.4;Parent=FBgn0039471.4.mrna1;Target=FBgn0039471.4 669 5 .
Chr1	stalkie_big_nohaplotig	CDS	127880901	127881563	96	-	0	ID=FBgn0039471.4.mrna1.cds1;Name=FBgn0039471.4;Parent=FBgn0039471.4.mrna1;Target=FBgn0039471.4 669 7 .
Chr1	stalkie_big_nohaplotig	mRNA	148251474	148257039	.	+	.	ID=FBgn0002948.1.mrna1;Name=FBgn0002948.1;Parent=FBgn0002948.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=2376;mismatches=9;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	148251474	148251590	100	+	.	ID=FBgn0002948.1.mrna1.exon1;Name=FBgn0002948.1;Parent=FBgn0002948.1.mrna1;Target=FBgn0002948.1 1 117 +
Chr1	stalkie_big_nohaplotig	exon	148251647	148251835	99	+	.	ID=FBgn0002948.1.mrna1.exon2;Name=FBgn0002948.1;Parent=FBgn0002948.1.mrna1;Target=FBgn0002948.1 118 306 +
Chr1	stalkie_big_nohaplotig	exon	148251903	148252089	100	+	.	ID=FBgn0002948.1.mrna1.exon3;Name=FBgn0002948.1;Parent=FBgn0002948.1.mrna1;Target=FBgn0002948.1 307 493 +
Chr1	stalkie_big_nohaplotig	exon	148252163	148252534	99	+	.	ID=FBgn0002948.1.mrna1.exon4;Name=FBgn0002948.1;Parent=FBgn0002948.1.mrna1;Target=FBgn0002948.1 494 865 +
Chr1	stalkie_big_nohaplotig	exon	148252605	148252759	99	+	.	ID=FBgn0002948.1.mrna1.exon5;Name=FBgn0002948.1;Parent=FBgn0002948.1.mrna1;Target=FBgn0002948.1 866 1020 +
Chr1	stalkie_big_nohaplotig	exon	148255324	148255595	99	+	.	ID=FBgn0002948.1.mrna1.exon6;Name=FBgn0002948.1;Parent=FBgn0002948.1.mrna1;Target=FBgn0002948.1 1021 1292 +
Chr1	stalkie_big_nohaplotig	exon	148255650	148255826	99	+	.	ID=FBgn0002948.1.mrna1.exon7;Name=FBgn0002948.1;Parent=FBgn0002948.1.mrna1;Target=FBgn0002948.1 1293 1469 +
Chr1	stalkie_big_nohaplotig	exon	148255890	148256196	100	+	.	ID=FBgn0002948.1.mrna1.exon8;Name=FBgn0002948.1;Parent=FBgn0002948.1.mrna1;Target=FBgn0002948.1 1470 1776 +
Chr1	stalkie_big_nohaplotig	exon	148256256	148256758	99	+	.	ID=FBgn0002948.1.mrna1.exon9;Name=FBgn0002948.1;Parent=FBgn0002948.1.mrna1;Target=FBgn0002948.1 1777 2279 +
Chr1	stalkie_big_nohaplotig	exon	148256877	148256961	100	+	.	ID=FBgn0002948.1.mrna1.exon10;Name=FBgn0002948.1;Parent=FBgn0002948.1.mrna1;Target=FBgn0002948.1 2280 2364 +
Chr1	stalkie_big_nohaplotig	exon	148257019	148257039	100	+	.	ID=FBgn0002948.1.mrna1.exon11;Name=FBgn0002948.1;Parent=FBgn0002948.1.mrna1;Target=FBgn0002948.1 2365 2385 +
Chr1	stalkie_big_nohaplotig	CDS	148251474	148251590	100	+	0	ID=FBgn0002948.1.mrna1.cds1;Name=FBgn0002948.1;Parent=FBgn0002948.1.mrna1;Target=FBgn0002948.1 1 117 +
Chr1	stalkie_big_nohaplotig	CDS	148251647	148251835	99	+	0	ID=FBgn0002948.1.mrna1.cds2;Name=FBgn0002948.1;Parent=FBgn0002948.1.mrna1;Target=FBgn0002948.1 118 306 +
Chr1	stalkie_big_nohaplotig	CDS	148251903	148252089	100	+	0	ID=FBgn0002948.1.mrna1.cds3;Name=FBgn0002948.1;Parent=FBgn0002948.1.mrna1;Target=FBgn0002948.1 307 493 +
Chr1	stalkie_big_nohaplotig	CDS	148252163	148252534	99	+	1	ID=FBgn0002948.1.mrna1.cds4;Name=FBgn0002948.1;Parent=FBgn0002948.1.mrna1;Target=FBgn0002948.1 494 865 +
Chr1	stalkie_big_nohaplotig	CDS	148252605	148252759	99	+	1	ID=FBgn0002948.1.mrna1.cds5;Name=FBgn0002948.1;Parent=FBgn0002948.1.mrna1;Target=FBgn0002948.1 866 1020 +
Chr1	stalkie_big_nohaplotig	CDS	148255324	148255595	99	+	0	ID=FBgn0002948.1.mrna1.cds6;Name=FBgn0002948.1;Parent=FBgn0002948.1.mrna1;Target=FBgn0002948.1 1021 1292 +
Chr1	stalkie_big_nohaplotig	CDS	148255650	148255826	99	+	2	ID=FBgn0002948.1.mrna1.cds7;Name=FBgn0002948.1;Parent=FBgn0002948.1.mrna1;Target=FBgn0002948.1 1293 1469 +
Chr1	stalkie_big_nohaplotig	CDS	148255890	148256196	100	+	2	ID=FBgn0002948.1.mrna1.cds8;Name=FBgn0002948.1;Parent=FBgn0002948.1.mrna1;Target=FBgn0002948.1 1470 1776 +
Chr1	stalkie_big_nohaplotig	CDS	148256256	148256758	99	+	0	ID=FBgn0002948.1.mrna1.cds9;Name=FBgn0002948.1;Parent=FBgn0002948.1.mrna1;Target=FBgn0002948.1 1777 2279 +
Chr1	stalkie_big_nohaplotig	CDS	148256877	148256961	100	+	2	ID=FBgn0002948.1.mrna1.cds10;Name=FBgn0002948.1;Parent=FBgn0002948.1.mrna1;Target=FBgn0002948.1 2280 2364 +
Chr1	stalkie_big_nohaplotig	CDS	148257019	148257039	100	+	0	ID=FBgn0002948.1.mrna1.cds11;Name=FBgn0002948.1;Parent=FBgn0002948.1.mrna1;Target=FBgn0002948.1 2365 2385 +
Chr2	stalkie_big_nohaplotig	mRNA	81536008	81537030	.	-	.	ID=ORF1696.mrna2;Name=ORF1696;Parent=ORF1696.path2;Dir=indeterminatecoverage=100.0;identity=98.2;matches=1005;mismatches=18;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	81536008	81537030	98	-	.	ID=ORF1696.mrna2.exon1;Name=ORF1696;Parent=ORF1696.mrna2;Target=ORF1696 1023 1 .
Chr2	stalkie_big_nohaplotig	CDS	81536008	81537030	98	-	0	ID=ORF1696.mrna2.cds1;Name=ORF1696;Parent=ORF1696.mrna2;Target=ORF1696 1023 1 .
Chr2	stalkie_big_nohaplotig	mRNA	127230547	127232859	.	-	.	ID=ORF235.mrna1;Name=ORF235;Parent=ORF235.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2313;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	127230547	127232859	100	-	.	ID=ORF235.mrna1.exon1;Name=ORF235;Parent=ORF235.mrna1;Target=ORF235 2313 1 .
Chr2	stalkie_big_nohaplotig	CDS	127230547	127232859	100	-	0	ID=ORF235.mrna1.cds1;Name=ORF235;Parent=ORF235.mrna1;Target=ORF235 2313 1 .
Chr2	stalkie_big_nohaplotig	mRNA	127260151	127264438	.	+	.	ID=FBgn0038842.1.mrna1;Name=FBgn0038842.1;Parent=FBgn0038842.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1371;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	127260151	127260402	100	+	.	ID=FBgn0038842.1.mrna1.exon1;Name=FBgn0038842.1;Parent=FBgn0038842.1.mrna1;Target=FBgn0038842.1 1 252 +
Chr2	stalkie_big_nohaplotig	exon	127261801	127261888	100	+	.	ID=FBgn0038842.1.mrna1.exon2;Name=FBgn0038842.1;Parent=FBgn0038842.1.mrna1;Target=FBgn0038842.1 253 340 +
Chr2	stalkie_big_nohaplotig	exon	127262642	127263119	100	+	.	ID=FBgn0038842.1.mrna1.exon3;Name=FBgn0038842.1;Parent=FBgn0038842.1.mrna1;Target=FBgn0038842.1 341 818 +
Chr2	stalkie_big_nohaplotig	exon	127263192	127263430	100	+	.	ID=FBgn0038842.1.mrna1.exon4;Name=FBgn0038842.1;Parent=FBgn0038842.1.mrna1;Target=FBgn0038842.1 819 1057 +
Chr2	stalkie_big_nohaplotig	exon	127263633	127263680	100	+	.	ID=FBgn0038842.1.mrna1.exon5;Name=FBgn0038842.1;Parent=FBgn0038842.1.mrna1;Target=FBgn0038842.1 1058 1105 +
Chr2	stalkie_big_nohaplotig	exon	127264173	127264438	100	+	.	ID=FBgn0038842.1.mrna1.exon6;Name=FBgn0038842.1;Parent=FBgn0038842.1.mrna1;Target=FBgn0038842.1 1106 1371 +
Chr2	stalkie_big_nohaplotig	CDS	127260151	127260402	100	+	0	ID=FBgn0038842.1.mrna1.cds1;Name=FBgn0038842.1;Parent=FBgn0038842.1.mrna1;Target=FBgn0038842.1 1 252 +
Chr2	stalkie_big_nohaplotig	CDS	127261801	127261888	100	+	0	ID=FBgn0038842.1.mrna1.cds2;Name=FBgn0038842.1;Parent=FBgn0038842.1.mrna1;Target=FBgn0038842.1 253 340 +
Chr2	stalkie_big_nohaplotig	CDS	127262642	127263119	100	+	1	ID=FBgn0038842.1.mrna1.cds3;Name=FBgn0038842.1;Parent=FBgn0038842.1.mrna1;Target=FBgn0038842.1 341 818 +
Chr2	stalkie_big_nohaplotig	CDS	127263192	127263430	100	+	2	ID=FBgn0038842.1.mrna1.cds4;Name=FBgn0038842.1;Parent=FBgn0038842.1.mrna1;Target=FBgn0038842.1 819 1057 +
Chr2	stalkie_big_nohaplotig	CDS	127263633	127263680	100	+	1	ID=FBgn0038842.1.mrna1.cds5;Name=FBgn0038842.1;Parent=FBgn0038842.1.mrna1;Target=FBgn0038842.1 1058 1105 +
Chr2	stalkie_big_nohaplotig	CDS	127264173	127264438	100	+	1	ID=FBgn0038842.1.mrna1.cds6;Name=FBgn0038842.1;Parent=FBgn0038842.1.mrna1;Target=FBgn0038842.1 1106 1371 +
Chr2	stalkie_big_nohaplotig	mRNA	127154569	127155982	.	+	.	ID=ORF855.mrna1;Name=ORF855;Parent=ORF855.path1;Dir=sensecoverage=99.9;identity=97.5;matches=1348;mismatches=7;indels=27;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	127154569	127155350	99	+	.	ID=ORF855.mrna1.exon1;Name=ORF855;Parent=ORF855.mrna1;Target=ORF855 2 783 +
Chr2	stalkie_big_nohaplotig	exon	127155410	127155982	94	+	.	ID=ORF855.mrna1.exon2;Name=ORF855;Parent=ORF855.mrna1;Target=ORF855 784 1383 +
Chr2	stalkie_big_nohaplotig	CDS	127154571	127155350	99	+	0	ID=ORF855.mrna1.cds1;Name=ORF855;Parent=ORF855.mrna1;Target=ORF855 4 783 +
Chr2	stalkie_big_nohaplotig	CDS	127155410	127155982	94	+	0	ID=ORF855.mrna1.cds2;Name=ORF855;Parent=ORF855.mrna1;Target=ORF855 784 1383 +
Chr1	stalkie_big_nohaplotig	mRNA	53674518	53675564	.	+	.	ID=FBgn0032057.mrna2;Name=FBgn0032057;Parent=FBgn0032057.path2;Dir=sensecoverage=93.9;identity=99.5;matches=925;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	53674518	53674686	100	+	.	ID=FBgn0032057.mrna2.exon1;Name=FBgn0032057;Parent=FBgn0032057.mrna2;Target=FBgn0032057 61 229 +
Chr1	stalkie_big_nohaplotig	exon	53674749	53674945	100	+	.	ID=FBgn0032057.mrna2.exon2;Name=FBgn0032057;Parent=FBgn0032057.mrna2;Target=FBgn0032057 230 426 +
Chr1	stalkie_big_nohaplotig	exon	53675001	53675564	99	+	.	ID=FBgn0032057.mrna2.exon3;Name=FBgn0032057;Parent=FBgn0032057.mrna2;Target=FBgn0032057 427 990 +
Chr1	stalkie_big_nohaplotig	CDS	53674518	53674686	100	+	0	ID=FBgn0032057.mrna2.cds1;Name=FBgn0032057;Parent=FBgn0032057.mrna2;Target=FBgn0032057 61 229 +
Chr1	stalkie_big_nohaplotig	CDS	53674749	53674945	100	+	1	ID=FBgn0032057.mrna2.cds2;Name=FBgn0032057;Parent=FBgn0032057.mrna2;Target=FBgn0032057 230 426 +
Chr1	stalkie_big_nohaplotig	CDS	53675001	53675564	99	+	0	ID=FBgn0032057.mrna2.cds3;Name=FBgn0032057;Parent=FBgn0032057.mrna2;Target=FBgn0032057 427 990 +
ChrX	stalkie_big_nohaplotig	mRNA	81686761	81687696	.	-	.	ID=ORF2023.mrna1;Name=ORF2023;Parent=ORF2023.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=936;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	81686761	81687696	100	-	.	ID=ORF2023.mrna1.exon1;Name=ORF2023;Parent=ORF2023.mrna1;Target=ORF2023 936 1 .
ChrX	stalkie_big_nohaplotig	CDS	81686761	81687696	100	-	0	ID=ORF2023.mrna1.cds1;Name=ORF2023;Parent=ORF2023.mrna1;Target=ORF2023 936 1 .
ChrX	stalkie_big_nohaplotig	mRNA	81577195	81619838	.	-	.	ID=FBgn0028644.1.mrna1;Name=FBgn0028644.1;Parent=FBgn0028644.1.path1;Dir=sensecoverage=90.8;identity=99.9;matches=1615;mismatches=0;indels=1;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	81619627	81619838	100	-	.	ID=FBgn0028644.1.mrna1.exon1;Name=FBgn0028644.1;Parent=FBgn0028644.1.mrna1;Target=FBgn0028644.1 140 351 +
ChrX	stalkie_big_nohaplotig	exon	81605821	81605956	100	-	.	ID=FBgn0028644.1.mrna1.exon2;Name=FBgn0028644.1;Parent=FBgn0028644.1.mrna1;Target=FBgn0028644.1 352 487 +
ChrX	stalkie_big_nohaplotig	exon	81605202	81605335	100	-	.	ID=FBgn0028644.1.mrna1.exon3;Name=FBgn0028644.1;Parent=FBgn0028644.1.mrna1;Target=FBgn0028644.1 488 621 +
ChrX	stalkie_big_nohaplotig	exon	81584189	81584311	100	-	.	ID=FBgn0028644.1.mrna1.exon4;Name=FBgn0028644.1;Parent=FBgn0028644.1.mrna1;Target=FBgn0028644.1 622 744 +
ChrX	stalkie_big_nohaplotig	exon	81583101	81583284	100	-	.	ID=FBgn0028644.1.mrna1.exon5;Name=FBgn0028644.1;Parent=FBgn0028644.1.mrna1;Target=FBgn0028644.1 745 928 +
ChrX	stalkie_big_nohaplotig	exon	81577195	81578020	99	-	.	ID=FBgn0028644.1.mrna1.exon6;Name=FBgn0028644.1;Parent=FBgn0028644.1.mrna1;Target=FBgn0028644.1 929 1755 +
ChrX	stalkie_big_nohaplotig	CDS	81619627	81619836	100	-	0	ID=FBgn0028644.1.mrna1.cds1;Name=FBgn0028644.1;Parent=FBgn0028644.1.mrna1;Target=FBgn0028644.1 142 351 +
ChrX	stalkie_big_nohaplotig	CDS	81605821	81605956	100	-	0	ID=FBgn0028644.1.mrna1.cds2;Name=FBgn0028644.1;Parent=FBgn0028644.1.mrna1;Target=FBgn0028644.1 352 487 +
ChrX	stalkie_big_nohaplotig	CDS	81605202	81605335	100	-	1	ID=FBgn0028644.1.mrna1.cds3;Name=FBgn0028644.1;Parent=FBgn0028644.1.mrna1;Target=FBgn0028644.1 488 621 +
ChrX	stalkie_big_nohaplotig	CDS	81584189	81584311	100	-	0	ID=FBgn0028644.1.mrna1.cds4;Name=FBgn0028644.1;Parent=FBgn0028644.1.mrna1;Target=FBgn0028644.1 622 744 +
ChrX	stalkie_big_nohaplotig	CDS	81583101	81583284	100	-	0	ID=FBgn0028644.1.mrna1.cds5;Name=FBgn0028644.1;Parent=FBgn0028644.1.mrna1;Target=FBgn0028644.1 745 928 +
ChrX	stalkie_big_nohaplotig	CDS	81577195	81578020	99	-	1	ID=FBgn0028644.1.mrna1.cds6;Name=FBgn0028644.1;Parent=FBgn0028644.1.mrna1;Target=FBgn0028644.1 929 1755 +
ChrX	stalkie_big_nohaplotig	mRNA	33219772	33220877	.	+	.	ID=ORF2642.mrna1;Name=ORF2642;Parent=ORF2642.path1;Dir=sensecoverage=100.0;identity=97.7;matches=812;mismatches=19;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	33219772	33220150	97	+	.	ID=ORF2642.mrna1.exon1;Name=ORF2642;Parent=ORF2642.mrna1;Target=ORF2642 1 379 +
ChrX	stalkie_big_nohaplotig	exon	33220213	33220380	95	+	.	ID=ORF2642.mrna1.exon2;Name=ORF2642;Parent=ORF2642.mrna1;Target=ORF2642 380 547 +
ChrX	stalkie_big_nohaplotig	exon	33220442	33220516	100	+	.	ID=ORF2642.mrna1.exon3;Name=ORF2642;Parent=ORF2642.mrna1;Target=ORF2642 548 622 +
ChrX	stalkie_big_nohaplotig	exon	33220669	33220877	99	+	.	ID=ORF2642.mrna1.exon4;Name=ORF2642;Parent=ORF2642.mrna1;Target=ORF2642 623 831 +
ChrX	stalkie_big_nohaplotig	CDS	33219772	33220150	97	+	0	ID=ORF2642.mrna1.cds1;Name=ORF2642;Parent=ORF2642.mrna1;Target=ORF2642 1 379 +
ChrX	stalkie_big_nohaplotig	CDS	33220213	33220380	95	+	1	ID=ORF2642.mrna1.cds2;Name=ORF2642;Parent=ORF2642.mrna1;Target=ORF2642 380 547 +
ChrX	stalkie_big_nohaplotig	CDS	33220442	33220516	100	+	1	ID=ORF2642.mrna1.cds3;Name=ORF2642;Parent=ORF2642.mrna1;Target=ORF2642 548 622 +
ChrX	stalkie_big_nohaplotig	CDS	33220669	33220877	99	+	1	ID=ORF2642.mrna1.cds4;Name=ORF2642;Parent=ORF2642.mrna1;Target=ORF2642 623 831 +
ChrX	stalkie_big_nohaplotig	mRNA	63269346	63270176	.	+	.	ID=ORF2630.mrna1;Name=ORF2630;Parent=ORF2630.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=831;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	63269346	63270176	100	+	.	ID=ORF2630.mrna1.exon1;Name=ORF2630;Parent=ORF2630.mrna1;Target=ORF2630 831 1 .
ChrX	stalkie_big_nohaplotig	CDS	63269346	63270176	100	+	0	ID=ORF2630.mrna1.cds1;Name=ORF2630;Parent=ORF2630.mrna1;Target=ORF2630 831 1 .
ChrX	stalkie_big_nohaplotig	mRNA	63255810	63257506	.	-	.	ID=ORF591.mrna1;Name=ORF591;Parent=ORF591.path1;Dir=sensecoverage=99.9;identity=99.0;matches=1618;mismatches=13;indels=4;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	63255946	63257506	98	-	.	ID=ORF591.mrna1.exon1;Name=ORF591;Parent=ORF591.mrna1;Target=ORF591 2 1558 +
ChrX	stalkie_big_nohaplotig	exon	63255810	63255883	100	-	.	ID=ORF591.mrna1.exon2;Name=ORF591;Parent=ORF591.mrna1;Target=ORF591 1559 1632 +
ChrX	stalkie_big_nohaplotig	CDS	63257473	63257506	70	-	0	ID=ORF591.mrna1.cds1;Name=ORF591;Parent=ORF591.mrna1;Target=ORF591 2 31 +
Chr2	stalkie_big_nohaplotig	mRNA	29996209	30023135	.	-	.	ID=FBgn0085397.1.mrna1;Name=FBgn0085397.1;Parent=FBgn0085397.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=2155;mismatches=8;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	30022242	30023135	99	-	.	ID=FBgn0085397.1.mrna1.exon1;Name=FBgn0085397.1;Parent=FBgn0085397.1.mrna1;Target=FBgn0085397.1 1 894 +
Chr2	stalkie_big_nohaplotig	exon	30013366	30013526	100	-	.	ID=FBgn0085397.1.mrna1.exon2;Name=FBgn0085397.1;Parent=FBgn0085397.1.mrna1;Target=FBgn0085397.1 895 1055 +
Chr2	stalkie_big_nohaplotig	exon	29996209	29997316	99	-	.	ID=FBgn0085397.1.mrna1.exon3;Name=FBgn0085397.1;Parent=FBgn0085397.1.mrna1;Target=FBgn0085397.1 1056 2163 +
Chr2	stalkie_big_nohaplotig	CDS	30022242	30023135	99	-	0	ID=FBgn0085397.1.mrna1.cds1;Name=FBgn0085397.1;Parent=FBgn0085397.1.mrna1;Target=FBgn0085397.1 1 894 +
Chr2	stalkie_big_nohaplotig	CDS	30013366	30013526	100	-	0	ID=FBgn0085397.1.mrna1.cds2;Name=FBgn0085397.1;Parent=FBgn0085397.1.mrna1;Target=FBgn0085397.1 895 1055 +
Chr2	stalkie_big_nohaplotig	CDS	29996209	29997316	99	-	2	ID=FBgn0085397.1.mrna1.cds3;Name=FBgn0085397.1;Parent=FBgn0085397.1.mrna1;Target=FBgn0085397.1 1056 2163 +
ChrX	stalkie_big_nohaplotig	mRNA	20809957	20810828	.	-	.	ID=ORF2707.mrna1;Name=ORF2707;Parent=ORF2707.path1;Dir=sensecoverage=100.0;identity=100.0;matches=819;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	20810577	20810828	100	-	.	ID=ORF2707.mrna1.exon1;Name=ORF2707;Parent=ORF2707.mrna1;Target=ORF2707 1 252 +
ChrX	stalkie_big_nohaplotig	exon	20809957	20810523	100	-	.	ID=ORF2707.mrna1.exon2;Name=ORF2707;Parent=ORF2707.mrna1;Target=ORF2707 253 819 +
ChrX	stalkie_big_nohaplotig	CDS	20810577	20810828	100	-	0	ID=ORF2707.mrna1.cds1;Name=ORF2707;Parent=ORF2707.mrna1;Target=ORF2707 1 252 +
ChrX	stalkie_big_nohaplotig	CDS	20809957	20810523	100	-	0	ID=ORF2707.mrna1.cds2;Name=ORF2707;Parent=ORF2707.mrna1;Target=ORF2707 253 819 +
Chr1	stalkie_big_nohaplotig	mRNA	139881130	139882530	.	+	.	ID=FBgn0033451.3.mrna1;Name=FBgn0033451.3;Parent=FBgn0033451.3.path1;Dir=sensecoverage=99.9;identity=99.2;matches=1181;mismatches=9;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	139881130	139881310	100	+	.	ID=FBgn0033451.3.mrna1.exon1;Name=FBgn0033451.3;Parent=FBgn0033451.3.mrna1;Target=FBgn0033451.3 1 181 +
Chr1	stalkie_big_nohaplotig	exon	139881380	139881996	99	+	.	ID=FBgn0033451.3.mrna1.exon2;Name=FBgn0033451.3;Parent=FBgn0033451.3.mrna1;Target=FBgn0033451.3 182 798 +
Chr1	stalkie_big_nohaplotig	exon	139882054	139882340	99	+	.	ID=FBgn0033451.3.mrna1.exon3;Name=FBgn0033451.3;Parent=FBgn0033451.3.mrna1;Target=FBgn0033451.3 799 1085 +
Chr1	stalkie_big_nohaplotig	exon	139882426	139882530	99	+	.	ID=FBgn0033451.3.mrna1.exon4;Name=FBgn0033451.3;Parent=FBgn0033451.3.mrna1;Target=FBgn0033451.3 1086 1190 +
Chr1	stalkie_big_nohaplotig	CDS	139881130	139881310	100	+	0	ID=FBgn0033451.3.mrna1.cds1;Name=FBgn0033451.3;Parent=FBgn0033451.3.mrna1;Target=FBgn0033451.3 1 181 +
Chr1	stalkie_big_nohaplotig	CDS	139881380	139881996	99	+	1	ID=FBgn0033451.3.mrna1.cds2;Name=FBgn0033451.3;Parent=FBgn0033451.3.mrna1;Target=FBgn0033451.3 182 798 +
Chr1	stalkie_big_nohaplotig	CDS	139882054	139882340	99	+	0	ID=FBgn0033451.3.mrna1.cds3;Name=FBgn0033451.3;Parent=FBgn0033451.3.mrna1;Target=FBgn0033451.3 799 1085 +
Chr1	stalkie_big_nohaplotig	CDS	139882426	139882528	99	+	2	ID=FBgn0033451.3.mrna1.cds4;Name=FBgn0033451.3;Parent=FBgn0033451.3.mrna1;Target=FBgn0033451.3 1086 1188 +
Chr2	stalkie_big_nohaplotig	mRNA	90507373	90568661	.	+	.	ID=FBgn0051536.1.mrna1;Name=FBgn0051536.1;Parent=FBgn0051536.1.path1;Dir=sensecoverage=100.0;identity=99.4;matches=3408;mismatches=14;indels=8;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	90507373	90507645	100	+	.	ID=FBgn0051536.1.mrna1.exon1;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 1 273 +
Chr2	stalkie_big_nohaplotig	exon	90537463	90537695	100	+	.	ID=FBgn0051536.1.mrna1.exon2;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 274 506 +
Chr2	stalkie_big_nohaplotig	exon	90537851	90538072	100	+	.	ID=FBgn0051536.1.mrna1.exon3;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 507 728 +
Chr2	stalkie_big_nohaplotig	exon	90540960	90541203	99	+	.	ID=FBgn0051536.1.mrna1.exon4;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 729 972 +
Chr2	stalkie_big_nohaplotig	exon	90541295	90541455	98	+	.	ID=FBgn0051536.1.mrna1.exon5;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 973 1133 +
Chr2	stalkie_big_nohaplotig	exon	90541530	90541604	100	+	.	ID=FBgn0051536.1.mrna1.exon6;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 1134 1208 +
Chr2	stalkie_big_nohaplotig	exon	90547904	90548010	100	+	.	ID=FBgn0051536.1.mrna1.exon7;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 1209 1315 +
Chr2	stalkie_big_nohaplotig	exon	90548206	90548321	100	+	.	ID=FBgn0051536.1.mrna1.exon8;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 1316 1431 +
Chr2	stalkie_big_nohaplotig	exon	90548392	90548608	100	+	.	ID=FBgn0051536.1.mrna1.exon9;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 1432 1648 +
Chr2	stalkie_big_nohaplotig	exon	90565783	90566051	98	+	.	ID=FBgn0051536.1.mrna1.exon10;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 1649 1918 +
Chr2	stalkie_big_nohaplotig	exon	90566126	90566597	99	+	.	ID=FBgn0051536.1.mrna1.exon11;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 1919 2389 +
Chr2	stalkie_big_nohaplotig	exon	90566667	90567179	98	+	.	ID=FBgn0051536.1.mrna1.exon12;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 2390 2902 +
Chr2	stalkie_big_nohaplotig	exon	90568078	90568531	99	+	.	ID=FBgn0051536.1.mrna1.exon13;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 2903 3356 +
Chr2	stalkie_big_nohaplotig	exon	90568592	90568661	100	+	.	ID=FBgn0051536.1.mrna1.exon14;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 3357 3426 +
Chr2	stalkie_big_nohaplotig	CDS	90507373	90507645	100	+	0	ID=FBgn0051536.1.mrna1.cds1;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 1 273 +
Chr2	stalkie_big_nohaplotig	CDS	90537463	90537695	100	+	0	ID=FBgn0051536.1.mrna1.cds2;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 274 506 +
Chr2	stalkie_big_nohaplotig	CDS	90537851	90538072	100	+	2	ID=FBgn0051536.1.mrna1.cds3;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 507 728 +
Chr2	stalkie_big_nohaplotig	CDS	90540960	90541203	99	+	2	ID=FBgn0051536.1.mrna1.cds4;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 729 972 +
Chr2	stalkie_big_nohaplotig	CDS	90541295	90541455	98	+	0	ID=FBgn0051536.1.mrna1.cds5;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 973 1133 +
Chr2	stalkie_big_nohaplotig	CDS	90541530	90541604	100	+	2	ID=FBgn0051536.1.mrna1.cds6;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 1134 1208 +
Chr2	stalkie_big_nohaplotig	CDS	90547904	90548010	100	+	2	ID=FBgn0051536.1.mrna1.cds7;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 1209 1315 +
Chr2	stalkie_big_nohaplotig	CDS	90548206	90548321	100	+	1	ID=FBgn0051536.1.mrna1.cds8;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 1316 1431 +
Chr2	stalkie_big_nohaplotig	CDS	90548392	90548608	100	+	0	ID=FBgn0051536.1.mrna1.cds9;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 1432 1648 +
Chr2	stalkie_big_nohaplotig	CDS	90565783	90566051	98	+	1	ID=FBgn0051536.1.mrna1.cds10;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 1649 1918 +
Chr2	stalkie_big_nohaplotig	CDS	90566126	90566597	99	+	1	ID=FBgn0051536.1.mrna1.cds11;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 1919 2389 +
Chr2	stalkie_big_nohaplotig	CDS	90566667	90567179	98	+	1	ID=FBgn0051536.1.mrna1.cds12;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 2390 2902 +
Chr2	stalkie_big_nohaplotig	CDS	90568078	90568531	99	+	1	ID=FBgn0051536.1.mrna1.cds13;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 2903 3356 +
Chr2	stalkie_big_nohaplotig	CDS	90568592	90568661	100	+	2	ID=FBgn0051536.1.mrna1.cds14;Name=FBgn0051536.1;Parent=FBgn0051536.1.mrna1;Target=FBgn0051536.1 3357 3426 +
Chr2	stalkie_big_nohaplotig	mRNA	56537085	56548444	.	+	.	ID=FBgn0033814.1.mrna1;Name=FBgn0033814.1;Parent=FBgn0033814.1.path1;Dir=sensecoverage=100.0;identity=99.2;matches=1946;mismatches=16;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	56537085	56538566	99	+	.	ID=FBgn0033814.1.mrna1.exon1;Name=FBgn0033814.1;Parent=FBgn0033814.1.mrna1;Target=FBgn0033814.1 1 1482 +
Chr2	stalkie_big_nohaplotig	exon	56547965	56548444	99	+	.	ID=FBgn0033814.1.mrna1.exon2;Name=FBgn0033814.1;Parent=FBgn0033814.1.mrna1;Target=FBgn0033814.1 1483 1962 +
Chr2	stalkie_big_nohaplotig	CDS	56537085	56538566	99	+	0	ID=FBgn0033814.1.mrna1.cds1;Name=FBgn0033814.1;Parent=FBgn0033814.1.mrna1;Target=FBgn0033814.1 1 1482 +
Chr2	stalkie_big_nohaplotig	CDS	56547965	56548444	99	+	0	ID=FBgn0033814.1.mrna1.cds2;Name=FBgn0033814.1;Parent=FBgn0033814.1.mrna1;Target=FBgn0033814.1 1483 1962 +
Chr2	stalkie_big_nohaplotig	mRNA	84170607	84172277	.	+	.	ID=FBgn0004901.1.mrna1;Name=FBgn0004901.1;Parent=FBgn0004901.1.path1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1659;mismatches=3;indels=9;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	84170607	84172277	99	+	.	ID=FBgn0004901.1.mrna1.exon1;Name=FBgn0004901.1;Parent=FBgn0004901.1.mrna1;Target=FBgn0004901.1 1662 1 .
Chr2	stalkie_big_nohaplotig	CDS	84170607	84172277	99	+	0	ID=FBgn0004901.1.mrna1.cds1;Name=FBgn0004901.1;Parent=FBgn0004901.1.mrna1;Target=FBgn0004901.1 1662 1 .
Chr2	stalkie_big_nohaplotig	mRNA	129624075	129656082	.	-	.	ID=FBgn0020379.1.mrna1;Name=FBgn0020379.1;Parent=FBgn0020379.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=2480;mismatches=13;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	129655759	129656082	100	-	.	ID=FBgn0020379.1.mrna1.exon1;Name=FBgn0020379.1;Parent=FBgn0020379.1.mrna1;Target=FBgn0020379.1 1 324 +
Chr2	stalkie_big_nohaplotig	exon	129655459	129655681	100	-	.	ID=FBgn0020379.1.mrna1.exon2;Name=FBgn0020379.1;Parent=FBgn0020379.1.mrna1;Target=FBgn0020379.1 325 547 +
Chr2	stalkie_big_nohaplotig	exon	129634262	129634346	100	-	.	ID=FBgn0020379.1.mrna1.exon3;Name=FBgn0020379.1;Parent=FBgn0020379.1.mrna1;Target=FBgn0020379.1 548 632 +
Chr2	stalkie_big_nohaplotig	exon	129633982	129634189	98	-	.	ID=FBgn0020379.1.mrna1.exon4;Name=FBgn0020379.1;Parent=FBgn0020379.1.mrna1;Target=FBgn0020379.1 633 840 +
Chr2	stalkie_big_nohaplotig	exon	129633725	129633889	100	-	.	ID=FBgn0020379.1.mrna1.exon5;Name=FBgn0020379.1;Parent=FBgn0020379.1.mrna1;Target=FBgn0020379.1 841 1005 +
Chr2	stalkie_big_nohaplotig	exon	129633033	129633428	99	-	.	ID=FBgn0020379.1.mrna1.exon6;Name=FBgn0020379.1;Parent=FBgn0020379.1.mrna1;Target=FBgn0020379.1 1006 1401 +
Chr2	stalkie_big_nohaplotig	exon	129626414	129626716	99	-	.	ID=FBgn0020379.1.mrna1.exon7;Name=FBgn0020379.1;Parent=FBgn0020379.1.mrna1;Target=FBgn0020379.1 1402 1704 +
Chr2	stalkie_big_nohaplotig	exon	129626018	129626332	99	-	.	ID=FBgn0020379.1.mrna1.exon8;Name=FBgn0020379.1;Parent=FBgn0020379.1.mrna1;Target=FBgn0020379.1 1705 2019 +
Chr2	stalkie_big_nohaplotig	exon	129624231	129624608	99	-	.	ID=FBgn0020379.1.mrna1.exon9;Name=FBgn0020379.1;Parent=FBgn0020379.1.mrna1;Target=FBgn0020379.1 2020 2397 +
Chr2	stalkie_big_nohaplotig	exon	129624075	129624170	97	-	.	ID=FBgn0020379.1.mrna1.exon10;Name=FBgn0020379.1;Parent=FBgn0020379.1.mrna1;Target=FBgn0020379.1 2398 2493 +
Chr2	stalkie_big_nohaplotig	CDS	129655759	129656082	100	-	0	ID=FBgn0020379.1.mrna1.cds1;Name=FBgn0020379.1;Parent=FBgn0020379.1.mrna1;Target=FBgn0020379.1 1 324 +
Chr2	stalkie_big_nohaplotig	CDS	129655459	129655681	100	-	0	ID=FBgn0020379.1.mrna1.cds2;Name=FBgn0020379.1;Parent=FBgn0020379.1.mrna1;Target=FBgn0020379.1 325 547 +
Chr2	stalkie_big_nohaplotig	CDS	129634262	129634346	100	-	1	ID=FBgn0020379.1.mrna1.cds3;Name=FBgn0020379.1;Parent=FBgn0020379.1.mrna1;Target=FBgn0020379.1 548 632 +
Chr2	stalkie_big_nohaplotig	CDS	129633982	129634189	98	-	2	ID=FBgn0020379.1.mrna1.cds4;Name=FBgn0020379.1;Parent=FBgn0020379.1.mrna1;Target=FBgn0020379.1 633 840 +
Chr2	stalkie_big_nohaplotig	CDS	129633725	129633889	100	-	0	ID=FBgn0020379.1.mrna1.cds5;Name=FBgn0020379.1;Parent=FBgn0020379.1.mrna1;Target=FBgn0020379.1 841 1005 +
Chr2	stalkie_big_nohaplotig	CDS	129633033	129633428	99	-	0	ID=FBgn0020379.1.mrna1.cds6;Name=FBgn0020379.1;Parent=FBgn0020379.1.mrna1;Target=FBgn0020379.1 1006 1401 +
Chr2	stalkie_big_nohaplotig	CDS	129626414	129626716	99	-	0	ID=FBgn0020379.1.mrna1.cds7;Name=FBgn0020379.1;Parent=FBgn0020379.1.mrna1;Target=FBgn0020379.1 1402 1704 +
Chr2	stalkie_big_nohaplotig	CDS	129626018	129626332	99	-	0	ID=FBgn0020379.1.mrna1.cds8;Name=FBgn0020379.1;Parent=FBgn0020379.1.mrna1;Target=FBgn0020379.1 1705 2019 +
Chr2	stalkie_big_nohaplotig	CDS	129624231	129624608	99	-	0	ID=FBgn0020379.1.mrna1.cds9;Name=FBgn0020379.1;Parent=FBgn0020379.1.mrna1;Target=FBgn0020379.1 2020 2397 +
Chr2	stalkie_big_nohaplotig	CDS	129624075	129624170	97	-	0	ID=FBgn0020379.1.mrna1.cds10;Name=FBgn0020379.1;Parent=FBgn0020379.1.mrna1;Target=FBgn0020379.1 2398 2493 +
Chr2	stalkie_big_nohaplotig	mRNA	128560060	128560863	.	-	.	ID=FBgn0261530.1.mrna1;Name=FBgn0261530.1;Parent=FBgn0261530.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=749;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	128560821	128560863	100	-	.	ID=FBgn0261530.1.mrna1.exon1;Name=FBgn0261530.1;Parent=FBgn0261530.1.mrna1;Target=FBgn0261530.1 1 43 +
Chr2	stalkie_big_nohaplotig	exon	128560060	128560766	99	-	.	ID=FBgn0261530.1.mrna1.exon2;Name=FBgn0261530.1;Parent=FBgn0261530.1.mrna1;Target=FBgn0261530.1 44 750 +
Chr2	stalkie_big_nohaplotig	CDS	128560821	128560863	100	-	0	ID=FBgn0261530.1.mrna1.cds1;Name=FBgn0261530.1;Parent=FBgn0261530.1.mrna1;Target=FBgn0261530.1 1 43 +
Chr2	stalkie_big_nohaplotig	CDS	128560060	128560766	99	-	1	ID=FBgn0261530.1.mrna1.cds2;Name=FBgn0261530.1;Parent=FBgn0261530.1.mrna1;Target=FBgn0261530.1 44 750 +
Chr2	stalkie_big_nohaplotig	mRNA	20434444	20443440	.	-	.	ID=ORF1206.mrna1;Name=ORF1206;Parent=ORF1206.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1185;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	20442305	20443440	100	-	.	ID=ORF1206.mrna1.exon1;Name=ORF1206;Parent=ORF1206.mrna1;Target=ORF1206 1 1136 +
Chr2	stalkie_big_nohaplotig	exon	20434444	20434492	100	-	.	ID=ORF1206.mrna1.exon2;Name=ORF1206;Parent=ORF1206.mrna1;Target=ORF1206 1137 1185 +
Chr2	stalkie_big_nohaplotig	CDS	20442305	20443440	100	-	0	ID=ORF1206.mrna1.cds1;Name=ORF1206;Parent=ORF1206.mrna1;Target=ORF1206 1 1136 +
Chr2	stalkie_big_nohaplotig	CDS	20434444	20434492	100	-	2	ID=ORF1206.mrna1.cds2;Name=ORF1206;Parent=ORF1206.mrna1;Target=ORF1206 1137 1185 +
Chr2	stalkie_big_nohaplotig	mRNA	151829227	151836221	.	+	.	ID=FBgn0051321.1.mrna1;Name=FBgn0051321.1;Parent=FBgn0051321.1.path1;Dir=sensecoverage=99.8;identity=99.2;matches=1801;mismatches=14;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	151829227	151829412	99	+	.	ID=FBgn0051321.1.mrna1.exon1;Name=FBgn0051321.1;Parent=FBgn0051321.1.mrna1;Target=FBgn0051321.1 4 189 +
Chr2	stalkie_big_nohaplotig	exon	151829517	151829742	98	+	.	ID=FBgn0051321.1.mrna1.exon2;Name=FBgn0051321.1;Parent=FBgn0051321.1.mrna1;Target=FBgn0051321.1 190 415 +
Chr2	stalkie_big_nohaplotig	exon	151832564	151832677	99	+	.	ID=FBgn0051321.1.mrna1.exon3;Name=FBgn0051321.1;Parent=FBgn0051321.1.mrna1;Target=FBgn0051321.1 416 529 +
Chr2	stalkie_big_nohaplotig	exon	151832800	151832959	98	+	.	ID=FBgn0051321.1.mrna1.exon4;Name=FBgn0051321.1;Parent=FBgn0051321.1.mrna1;Target=FBgn0051321.1 530 689 +
Chr2	stalkie_big_nohaplotig	exon	151834585	151834673	100	+	.	ID=FBgn0051321.1.mrna1.exon5;Name=FBgn0051321.1;Parent=FBgn0051321.1.mrna1;Target=FBgn0051321.1 690 778 +
Chr2	stalkie_big_nohaplotig	exon	151834730	151835149	99	+	.	ID=FBgn0051321.1.mrna1.exon6;Name=FBgn0051321.1;Parent=FBgn0051321.1.mrna1;Target=FBgn0051321.1 779 1198 +
Chr2	stalkie_big_nohaplotig	exon	151835314	151835415	99	+	.	ID=FBgn0051321.1.mrna1.exon7;Name=FBgn0051321.1;Parent=FBgn0051321.1.mrna1;Target=FBgn0051321.1 1199 1300 +
Chr2	stalkie_big_nohaplotig	exon	151835487	151835590	98	+	.	ID=FBgn0051321.1.mrna1.exon8;Name=FBgn0051321.1;Parent=FBgn0051321.1.mrna1;Target=FBgn0051321.1 1301 1404 +
Chr2	stalkie_big_nohaplotig	exon	151835661	151835778	100	+	.	ID=FBgn0051321.1.mrna1.exon9;Name=FBgn0051321.1;Parent=FBgn0051321.1.mrna1;Target=FBgn0051321.1 1405 1522 +
Chr2	stalkie_big_nohaplotig	exon	151835842	151835998	100	+	.	ID=FBgn0051321.1.mrna1.exon10;Name=FBgn0051321.1;Parent=FBgn0051321.1.mrna1;Target=FBgn0051321.1 1523 1679 +
Chr2	stalkie_big_nohaplotig	exon	151836083	151836221	98	+	.	ID=FBgn0051321.1.mrna1.exon11;Name=FBgn0051321.1;Parent=FBgn0051321.1.mrna1;Target=FBgn0051321.1 1680 1818 +
Chr2	stalkie_big_nohaplotig	CDS	151829227	151829412	99	+	0	ID=FBgn0051321.1.mrna1.cds1;Name=FBgn0051321.1;Parent=FBgn0051321.1.mrna1;Target=FBgn0051321.1 4 189 +
Chr2	stalkie_big_nohaplotig	CDS	151829517	151829742	98	+	0	ID=FBgn0051321.1.mrna1.cds2;Name=FBgn0051321.1;Parent=FBgn0051321.1.mrna1;Target=FBgn0051321.1 190 415 +
Chr2	stalkie_big_nohaplotig	CDS	151832564	151832677	99	+	1	ID=FBgn0051321.1.mrna1.cds3;Name=FBgn0051321.1;Parent=FBgn0051321.1.mrna1;Target=FBgn0051321.1 416 529 +
Chr2	stalkie_big_nohaplotig	CDS	151832800	151832959	98	+	1	ID=FBgn0051321.1.mrna1.cds4;Name=FBgn0051321.1;Parent=FBgn0051321.1.mrna1;Target=FBgn0051321.1 530 689 +
Chr2	stalkie_big_nohaplotig	CDS	151834585	151834673	100	+	2	ID=FBgn0051321.1.mrna1.cds5;Name=FBgn0051321.1;Parent=FBgn0051321.1.mrna1;Target=FBgn0051321.1 690 778 +
Chr2	stalkie_big_nohaplotig	CDS	151834730	151835149	99	+	1	ID=FBgn0051321.1.mrna1.cds6;Name=FBgn0051321.1;Parent=FBgn0051321.1.mrna1;Target=FBgn0051321.1 779 1198 +
Chr2	stalkie_big_nohaplotig	CDS	151835314	151835415	99	+	1	ID=FBgn0051321.1.mrna1.cds7;Name=FBgn0051321.1;Parent=FBgn0051321.1.mrna1;Target=FBgn0051321.1 1199 1300 +
Chr2	stalkie_big_nohaplotig	CDS	151835487	151835590	98	+	1	ID=FBgn0051321.1.mrna1.cds8;Name=FBgn0051321.1;Parent=FBgn0051321.1.mrna1;Target=FBgn0051321.1 1301 1404 +
Chr2	stalkie_big_nohaplotig	CDS	151835661	151835778	100	+	0	ID=FBgn0051321.1.mrna1.cds9;Name=FBgn0051321.1;Parent=FBgn0051321.1.mrna1;Target=FBgn0051321.1 1405 1522 +
Chr2	stalkie_big_nohaplotig	CDS	151835842	151835998	100	+	1	ID=FBgn0051321.1.mrna1.cds10;Name=FBgn0051321.1;Parent=FBgn0051321.1.mrna1;Target=FBgn0051321.1 1523 1679 +
Chr2	stalkie_big_nohaplotig	CDS	151836083	151836221	98	+	2	ID=FBgn0051321.1.mrna1.cds11;Name=FBgn0051321.1;Parent=FBgn0051321.1.mrna1;Target=FBgn0051321.1 1680 1818 +
Chr1	stalkie_big_nohaplotig	mRNA	87892806	87924910	.	+	.	ID=FBgn0029881.1.mrna1;Name=FBgn0029881.1;Parent=FBgn0029881.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2871;mismatches=6;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	87892806	87892988	100	+	.	ID=FBgn0029881.1.mrna1.exon1;Name=FBgn0029881.1;Parent=FBgn0029881.1.mrna1;Target=FBgn0029881.1 1 183 +
Chr1	stalkie_big_nohaplotig	exon	87901667	87901863	99	+	.	ID=FBgn0029881.1.mrna1.exon2;Name=FBgn0029881.1;Parent=FBgn0029881.1.mrna1;Target=FBgn0029881.1 184 380 +
Chr1	stalkie_big_nohaplotig	exon	87906382	87906500	100	+	.	ID=FBgn0029881.1.mrna1.exon3;Name=FBgn0029881.1;Parent=FBgn0029881.1.mrna1;Target=FBgn0029881.1 381 499 +
Chr1	stalkie_big_nohaplotig	exon	87906555	87906835	98	+	.	ID=FBgn0029881.1.mrna1.exon4;Name=FBgn0029881.1;Parent=FBgn0029881.1.mrna1;Target=FBgn0029881.1 500 780 +
Chr1	stalkie_big_nohaplotig	exon	87911649	87911756	100	+	.	ID=FBgn0029881.1.mrna1.exon5;Name=FBgn0029881.1;Parent=FBgn0029881.1.mrna1;Target=FBgn0029881.1 781 888 +
Chr1	stalkie_big_nohaplotig	exon	87920810	87920997	100	+	.	ID=FBgn0029881.1.mrna1.exon6;Name=FBgn0029881.1;Parent=FBgn0029881.1.mrna1;Target=FBgn0029881.1 889 1076 +
Chr1	stalkie_big_nohaplotig	exon	87922017	87922660	100	+	.	ID=FBgn0029881.1.mrna1.exon7;Name=FBgn0029881.1;Parent=FBgn0029881.1.mrna1;Target=FBgn0029881.1 1077 1720 +
Chr1	stalkie_big_nohaplotig	exon	87923754	87924910	100	+	.	ID=FBgn0029881.1.mrna1.exon8;Name=FBgn0029881.1;Parent=FBgn0029881.1.mrna1;Target=FBgn0029881.1 1721 2877 +
Chr1	stalkie_big_nohaplotig	CDS	87892806	87892988	100	+	0	ID=FBgn0029881.1.mrna1.cds1;Name=FBgn0029881.1;Parent=FBgn0029881.1.mrna1;Target=FBgn0029881.1 1 183 +
Chr1	stalkie_big_nohaplotig	CDS	87901667	87901863	99	+	0	ID=FBgn0029881.1.mrna1.cds2;Name=FBgn0029881.1;Parent=FBgn0029881.1.mrna1;Target=FBgn0029881.1 184 380 +
Chr1	stalkie_big_nohaplotig	CDS	87906382	87906500	100	+	2	ID=FBgn0029881.1.mrna1.cds3;Name=FBgn0029881.1;Parent=FBgn0029881.1.mrna1;Target=FBgn0029881.1 381 499 +
Chr1	stalkie_big_nohaplotig	CDS	87906555	87906835	98	+	1	ID=FBgn0029881.1.mrna1.cds4;Name=FBgn0029881.1;Parent=FBgn0029881.1.mrna1;Target=FBgn0029881.1 500 780 +
Chr1	stalkie_big_nohaplotig	CDS	87911649	87911756	100	+	0	ID=FBgn0029881.1.mrna1.cds5;Name=FBgn0029881.1;Parent=FBgn0029881.1.mrna1;Target=FBgn0029881.1 781 888 +
Chr1	stalkie_big_nohaplotig	CDS	87920810	87920997	100	+	0	ID=FBgn0029881.1.mrna1.cds6;Name=FBgn0029881.1;Parent=FBgn0029881.1.mrna1;Target=FBgn0029881.1 889 1076 +
Chr1	stalkie_big_nohaplotig	CDS	87922017	87922660	100	+	2	ID=FBgn0029881.1.mrna1.cds7;Name=FBgn0029881.1;Parent=FBgn0029881.1.mrna1;Target=FBgn0029881.1 1077 1720 +
Chr1	stalkie_big_nohaplotig	CDS	87923754	87924910	100	+	1	ID=FBgn0029881.1.mrna1.cds8;Name=FBgn0029881.1;Parent=FBgn0029881.1.mrna1;Target=FBgn0029881.1 1721 2877 +
Chr1	stalkie_big_nohaplotig	mRNA	138108031	138110754	.	-	.	ID=FBgn0029839.1.mrna1;Name=FBgn0029839.1;Parent=FBgn0029839.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=749;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	138110556	138110754	100	-	.	ID=FBgn0029839.1.mrna1.exon1;Name=FBgn0029839.1;Parent=FBgn0029839.1.mrna1;Target=FBgn0029839.1 1 199 +
Chr1	stalkie_big_nohaplotig	exon	138108449	138108663	100	-	.	ID=FBgn0029839.1.mrna1.exon2;Name=FBgn0029839.1;Parent=FBgn0029839.1.mrna1;Target=FBgn0029839.1 200 414 +
Chr1	stalkie_big_nohaplotig	exon	138108031	138108369	98	-	.	ID=FBgn0029839.1.mrna1.exon3;Name=FBgn0029839.1;Parent=FBgn0029839.1.mrna1;Target=FBgn0029839.1 415 753 +
Chr1	stalkie_big_nohaplotig	CDS	138110556	138110754	100	-	0	ID=FBgn0029839.1.mrna1.cds1;Name=FBgn0029839.1;Parent=FBgn0029839.1.mrna1;Target=FBgn0029839.1 1 199 +
Chr1	stalkie_big_nohaplotig	CDS	138108449	138108663	100	-	1	ID=FBgn0029839.1.mrna1.cds2;Name=FBgn0029839.1;Parent=FBgn0029839.1.mrna1;Target=FBgn0029839.1 200 414 +
Chr1	stalkie_big_nohaplotig	CDS	138108031	138108369	98	-	0	ID=FBgn0029839.1.mrna1.cds3;Name=FBgn0029839.1;Parent=FBgn0029839.1.mrna1;Target=FBgn0029839.1 415 753 +
Chr2	stalkie_big_nohaplotig	mRNA	139732977	139749040	.	-	.	ID=FBgn0041605.1.mrna2;Name=FBgn0041605.1;Parent=FBgn0041605.1.path2;Dir=sensecoverage=83.7;identity=97.9;matches=366;mismatches=8;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	139748871	139749040	95	-	.	ID=FBgn0041605.1.mrna2.exon1;Name=FBgn0041605.1;Parent=FBgn0041605.1.mrna2;Target=FBgn0041605.1 74 243 +
Chr2	stalkie_big_nohaplotig	exon	139741228	139741360	100	-	.	ID=FBgn0041605.1.mrna2.exon2;Name=FBgn0041605.1;Parent=FBgn0041605.1.mrna2;Target=FBgn0041605.1 244 376 +
Chr2	stalkie_big_nohaplotig	exon	139732977	139733047	98	-	.	ID=FBgn0041605.1.mrna2.exon3;Name=FBgn0041605.1;Parent=FBgn0041605.1.mrna2;Target=FBgn0041605.1 377 447 +
Chr2	stalkie_big_nohaplotig	CDS	139748871	139749040	95	-	1	ID=FBgn0041605.1.mrna2.cds1;Name=FBgn0041605.1;Parent=FBgn0041605.1.mrna2;Target=FBgn0041605.1 74 243 +
Chr2	stalkie_big_nohaplotig	CDS	139741228	139741360	100	-	0	ID=FBgn0041605.1.mrna2.cds2;Name=FBgn0041605.1;Parent=FBgn0041605.1.mrna2;Target=FBgn0041605.1 244 376 +
Chr2	stalkie_big_nohaplotig	CDS	139732977	139733047	98	-	1	ID=FBgn0041605.1.mrna2.cds3;Name=FBgn0041605.1;Parent=FBgn0041605.1.mrna2;Target=FBgn0041605.1 377 447 +
Chr2	stalkie_big_nohaplotig	mRNA	126290345	126303280	.	+	.	ID=FBgn0010355.2.mrna1;Name=FBgn0010355.2;Parent=FBgn0010355.2.path1;Dir=sensecoverage=100.0;identity=99.4;matches=5942;mismatches=34;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	126290345	126290502	98	+	.	ID=FBgn0010355.2.mrna1.exon1;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 1 158 +
Chr2	stalkie_big_nohaplotig	exon	126290565	126290821	100	+	.	ID=FBgn0010355.2.mrna1.exon2;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 159 415 +
Chr2	stalkie_big_nohaplotig	exon	126290887	126291021	99	+	.	ID=FBgn0010355.2.mrna1.exon3;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 416 550 +
Chr2	stalkie_big_nohaplotig	exon	126291125	126291336	97	+	.	ID=FBgn0010355.2.mrna1.exon4;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 551 762 +
Chr2	stalkie_big_nohaplotig	exon	126291395	126292020	99	+	.	ID=FBgn0010355.2.mrna1.exon5;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 763 1388 +
Chr2	stalkie_big_nohaplotig	exon	126292084	126292464	100	+	.	ID=FBgn0010355.2.mrna1.exon6;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 1389 1769 +
Chr2	stalkie_big_nohaplotig	exon	126292749	126292854	99	+	.	ID=FBgn0010355.2.mrna1.exon7;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 1770 1875 +
Chr2	stalkie_big_nohaplotig	exon	126292990	126293256	99	+	.	ID=FBgn0010355.2.mrna1.exon8;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 1876 2142 +
Chr2	stalkie_big_nohaplotig	exon	126293318	126293662	99	+	.	ID=FBgn0010355.2.mrna1.exon9;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 2143 2487 +
Chr2	stalkie_big_nohaplotig	exon	126293720	126293992	98	+	.	ID=FBgn0010355.2.mrna1.exon10;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 2488 2760 +
Chr2	stalkie_big_nohaplotig	exon	126294050	126294159	100	+	.	ID=FBgn0010355.2.mrna1.exon11;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 2761 2870 +
Chr2	stalkie_big_nohaplotig	exon	126294244	126294355	100	+	.	ID=FBgn0010355.2.mrna1.exon12;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 2871 2982 +
Chr2	stalkie_big_nohaplotig	exon	126294420	126295421	99	+	.	ID=FBgn0010355.2.mrna1.exon13;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 2983 3984 +
Chr2	stalkie_big_nohaplotig	exon	126295490	126295915	99	+	.	ID=FBgn0010355.2.mrna1.exon14;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 3985 4410 +
Chr2	stalkie_big_nohaplotig	exon	126295980	126296415	98	+	.	ID=FBgn0010355.2.mrna1.exon15;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 4411 4846 +
Chr2	stalkie_big_nohaplotig	exon	126297375	126297517	100	+	.	ID=FBgn0010355.2.mrna1.exon16;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 4847 4989 +
Chr2	stalkie_big_nohaplotig	exon	126297581	126297887	100	+	.	ID=FBgn0010355.2.mrna1.exon17;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 4990 5296 +
Chr2	stalkie_big_nohaplotig	exon	126298507	126298602	100	+	.	ID=FBgn0010355.2.mrna1.exon18;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 5297 5392 +
Chr2	stalkie_big_nohaplotig	exon	126299105	126299284	100	+	.	ID=FBgn0010355.2.mrna1.exon19;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 5393 5572 +
Chr2	stalkie_big_nohaplotig	exon	126302877	126303280	99	+	.	ID=FBgn0010355.2.mrna1.exon20;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 5573 5976 +
Chr2	stalkie_big_nohaplotig	CDS	126290345	126290502	98	+	0	ID=FBgn0010355.2.mrna1.cds1;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 1 158 +
Chr2	stalkie_big_nohaplotig	CDS	126290565	126290821	100	+	2	ID=FBgn0010355.2.mrna1.cds2;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 159 415 +
Chr2	stalkie_big_nohaplotig	CDS	126290887	126291021	99	+	1	ID=FBgn0010355.2.mrna1.cds3;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 416 550 +
Chr2	stalkie_big_nohaplotig	CDS	126291125	126291336	97	+	1	ID=FBgn0010355.2.mrna1.cds4;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 551 762 +
Chr2	stalkie_big_nohaplotig	CDS	126291395	126292020	99	+	0	ID=FBgn0010355.2.mrna1.cds5;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 763 1388 +
Chr2	stalkie_big_nohaplotig	CDS	126292084	126292464	100	+	2	ID=FBgn0010355.2.mrna1.cds6;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 1389 1769 +
Chr2	stalkie_big_nohaplotig	CDS	126292749	126292854	99	+	2	ID=FBgn0010355.2.mrna1.cds7;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 1770 1875 +
Chr2	stalkie_big_nohaplotig	CDS	126292990	126293256	99	+	0	ID=FBgn0010355.2.mrna1.cds8;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 1876 2142 +
Chr2	stalkie_big_nohaplotig	CDS	126293318	126293662	99	+	0	ID=FBgn0010355.2.mrna1.cds9;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 2143 2487 +
Chr2	stalkie_big_nohaplotig	CDS	126293720	126293992	98	+	0	ID=FBgn0010355.2.mrna1.cds10;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 2488 2760 +
Chr2	stalkie_big_nohaplotig	CDS	126294050	126294159	100	+	0	ID=FBgn0010355.2.mrna1.cds11;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 2761 2870 +
Chr2	stalkie_big_nohaplotig	CDS	126294244	126294355	100	+	2	ID=FBgn0010355.2.mrna1.cds12;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 2871 2982 +
Chr2	stalkie_big_nohaplotig	CDS	126294420	126295421	99	+	0	ID=FBgn0010355.2.mrna1.cds13;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 2983 3984 +
Chr2	stalkie_big_nohaplotig	CDS	126295490	126295915	99	+	0	ID=FBgn0010355.2.mrna1.cds14;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 3985 4410 +
Chr2	stalkie_big_nohaplotig	CDS	126295980	126296415	98	+	0	ID=FBgn0010355.2.mrna1.cds15;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 4411 4846 +
Chr2	stalkie_big_nohaplotig	CDS	126297375	126297517	100	+	1	ID=FBgn0010355.2.mrna1.cds16;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 4847 4989 +
Chr2	stalkie_big_nohaplotig	CDS	126297581	126297887	100	+	0	ID=FBgn0010355.2.mrna1.cds17;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 4990 5296 +
Chr2	stalkie_big_nohaplotig	CDS	126298507	126298602	100	+	1	ID=FBgn0010355.2.mrna1.cds18;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 5297 5392 +
Chr2	stalkie_big_nohaplotig	CDS	126299105	126299284	100	+	1	ID=FBgn0010355.2.mrna1.cds19;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 5393 5572 +
Chr2	stalkie_big_nohaplotig	CDS	126302877	126303280	99	+	1	ID=FBgn0010355.2.mrna1.cds20;Name=FBgn0010355.2;Parent=FBgn0010355.2.mrna1;Target=FBgn0010355.2 5573 5976 +
Chr1	stalkie_big_nohaplotig	mRNA	118627751	118628824	.	+	.	ID=AGAP000379.1.mrna1;Name=AGAP000379.1;Parent=AGAP000379.1.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1073;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	118627751	118628824	99	+	.	ID=AGAP000379.1.mrna1.exon1;Name=AGAP000379.1;Parent=AGAP000379.1.mrna1;Target=AGAP000379.1 1074 1 .
Chr1	stalkie_big_nohaplotig	CDS	118627751	118628824	99	+	0	ID=AGAP000379.1.mrna1.cds1;Name=AGAP000379.1;Parent=AGAP000379.1.mrna1;Target=AGAP000379.1 1074 1 .
ChrX	stalkie_big_nohaplotig	mRNA	48093088	48095027	.	-	.	ID=FBgn0029173.1.mrna1;Name=FBgn0029173.1;Parent=FBgn0029173.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1887;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	48094842	48095027	100	-	.	ID=FBgn0029173.1.mrna1.exon1;Name=FBgn0029173.1;Parent=FBgn0029173.1.mrna1;Target=FBgn0029173.1 1 186 +
ChrX	stalkie_big_nohaplotig	exon	48093088	48094788	100	-	.	ID=FBgn0029173.1.mrna1.exon2;Name=FBgn0029173.1;Parent=FBgn0029173.1.mrna1;Target=FBgn0029173.1 187 1887 +
ChrX	stalkie_big_nohaplotig	CDS	48094842	48095027	100	-	0	ID=FBgn0029173.1.mrna1.cds1;Name=FBgn0029173.1;Parent=FBgn0029173.1.mrna1;Target=FBgn0029173.1 1 186 +
ChrX	stalkie_big_nohaplotig	CDS	48093088	48094788	100	-	0	ID=FBgn0029173.1.mrna1.cds2;Name=FBgn0029173.1;Parent=FBgn0029173.1.mrna1;Target=FBgn0029173.1 187 1887 +
Chr2	stalkie_big_nohaplotig	mRNA	133564720	133593947	.	+	.	ID=FBgn0053555.1.mrna1;Name=FBgn0053555.1;Parent=FBgn0053555.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=6100;mismatches=10;indels=0;unknowns=4
Chr2	stalkie_big_nohaplotig	exon	133564720	133569571	99	+	.	ID=FBgn0053555.1.mrna1.exon1;Name=FBgn0053555.1;Parent=FBgn0053555.1.mrna1;Target=FBgn0053555.1 1 4852 +
Chr2	stalkie_big_nohaplotig	exon	133588088	133588275	99	+	.	ID=FBgn0053555.1.mrna1.exon2;Name=FBgn0053555.1;Parent=FBgn0053555.1.mrna1;Target=FBgn0053555.1 4853 5040 +
Chr2	stalkie_big_nohaplotig	exon	133592429	133592623	100	+	.	ID=FBgn0053555.1.mrna1.exon3;Name=FBgn0053555.1;Parent=FBgn0053555.1.mrna1;Target=FBgn0053555.1 5041 5235 +
Chr2	stalkie_big_nohaplotig	exon	133592849	133593103	100	+	.	ID=FBgn0053555.1.mrna1.exon4;Name=FBgn0053555.1;Parent=FBgn0053555.1.mrna1;Target=FBgn0053555.1 5236 5490 +
Chr2	stalkie_big_nohaplotig	exon	133593181	133593449	98	+	.	ID=FBgn0053555.1.mrna1.exon5;Name=FBgn0053555.1;Parent=FBgn0053555.1.mrna1;Target=FBgn0053555.1 5491 5759 +
Chr2	stalkie_big_nohaplotig	exon	133593515	133593723	99	+	.	ID=FBgn0053555.1.mrna1.exon6;Name=FBgn0053555.1;Parent=FBgn0053555.1.mrna1;Target=FBgn0053555.1 5760 5968 +
Chr2	stalkie_big_nohaplotig	exon	133593802	133593947	100	+	.	ID=FBgn0053555.1.mrna1.exon7;Name=FBgn0053555.1;Parent=FBgn0053555.1.mrna1;Target=FBgn0053555.1 5969 6114 +
Chr2	stalkie_big_nohaplotig	CDS	133564720	133569571	99	+	0	ID=FBgn0053555.1.mrna1.cds1;Name=FBgn0053555.1;Parent=FBgn0053555.1.mrna1;Target=FBgn0053555.1 1 4852 +
Chr2	stalkie_big_nohaplotig	CDS	133588088	133588275	99	+	1	ID=FBgn0053555.1.mrna1.cds2;Name=FBgn0053555.1;Parent=FBgn0053555.1.mrna1;Target=FBgn0053555.1 4853 5040 +
Chr2	stalkie_big_nohaplotig	CDS	133592429	133592623	100	+	0	ID=FBgn0053555.1.mrna1.cds3;Name=FBgn0053555.1;Parent=FBgn0053555.1.mrna1;Target=FBgn0053555.1 5041 5235 +
Chr2	stalkie_big_nohaplotig	CDS	133592849	133593103	100	+	0	ID=FBgn0053555.1.mrna1.cds4;Name=FBgn0053555.1;Parent=FBgn0053555.1.mrna1;Target=FBgn0053555.1 5236 5490 +
Chr2	stalkie_big_nohaplotig	CDS	133593181	133593449	98	+	0	ID=FBgn0053555.1.mrna1.cds5;Name=FBgn0053555.1;Parent=FBgn0053555.1.mrna1;Target=FBgn0053555.1 5491 5759 +
Chr2	stalkie_big_nohaplotig	CDS	133593515	133593723	99	+	2	ID=FBgn0053555.1.mrna1.cds6;Name=FBgn0053555.1;Parent=FBgn0053555.1.mrna1;Target=FBgn0053555.1 5760 5968 +
Chr2	stalkie_big_nohaplotig	CDS	133593802	133593947	100	+	1	ID=FBgn0053555.1.mrna1.cds7;Name=FBgn0053555.1;Parent=FBgn0053555.1.mrna1;Target=FBgn0053555.1 5969 6114 +
Chr2	stalkie_big_nohaplotig	mRNA	3873077	3874663	.	+	.	ID=FBgn0033304.2.mrna1;Name=FBgn0033304.2;Parent=FBgn0033304.2.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1515;mismatches=6;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	3873077	3874181	99	+	.	ID=FBgn0033304.2.mrna1.exon1;Name=FBgn0033304.2;Parent=FBgn0033304.2.mrna1;Target=FBgn0033304.2 1 1105 +
Chr2	stalkie_big_nohaplotig	exon	3874248	3874663	99	+	.	ID=FBgn0033304.2.mrna1.exon2;Name=FBgn0033304.2;Parent=FBgn0033304.2.mrna1;Target=FBgn0033304.2 1106 1521 +
Chr2	stalkie_big_nohaplotig	CDS	3873077	3874181	99	+	0	ID=FBgn0033304.2.mrna1.cds1;Name=FBgn0033304.2;Parent=FBgn0033304.2.mrna1;Target=FBgn0033304.2 1 1105 +
Chr2	stalkie_big_nohaplotig	CDS	3874248	3874663	99	+	1	ID=FBgn0033304.2.mrna1.cds2;Name=FBgn0033304.2;Parent=FBgn0033304.2.mrna1;Target=FBgn0033304.2 1106 1521 +
Chr1	stalkie_big_nohaplotig	mRNA	115716230	115716625	.	+	.	ID=FBgn0030183.1.mrna1;Name=FBgn0030183.1;Parent=FBgn0030183.1.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=396;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	115716230	115716625	100	+	.	ID=FBgn0030183.1.mrna1.exon1;Name=FBgn0030183.1;Parent=FBgn0030183.1.mrna1;Target=FBgn0030183.1 396 1 .
Chr1	stalkie_big_nohaplotig	CDS	115716230	115716625	100	+	0	ID=FBgn0030183.1.mrna1.cds1;Name=FBgn0030183.1;Parent=FBgn0030183.1.mrna1;Target=FBgn0030183.1 396 1 .
Chr2	stalkie_big_nohaplotig	mRNA	42131955	42167457	.	+	.	ID=FBgn0000395.1.mrna1;Name=FBgn0000395.1;Parent=FBgn0000395.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=2256;mismatches=9;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	42131955	42132234	100	+	.	ID=FBgn0000395.1.mrna1.exon1;Name=FBgn0000395.1;Parent=FBgn0000395.1.mrna1;Target=FBgn0000395.1 1 280 +
Chr2	stalkie_big_nohaplotig	exon	42139308	42139393	100	+	.	ID=FBgn0000395.1.mrna1.exon2;Name=FBgn0000395.1;Parent=FBgn0000395.1.mrna1;Target=FBgn0000395.1 281 366 +
Chr2	stalkie_big_nohaplotig	exon	42160365	42160464	99	+	.	ID=FBgn0000395.1.mrna1.exon3;Name=FBgn0000395.1;Parent=FBgn0000395.1.mrna1;Target=FBgn0000395.1 367 466 +
Chr2	stalkie_big_nohaplotig	exon	42160533	42160715	99	+	.	ID=FBgn0000395.1.mrna1.exon4;Name=FBgn0000395.1;Parent=FBgn0000395.1.mrna1;Target=FBgn0000395.1 467 649 +
Chr2	stalkie_big_nohaplotig	exon	42165750	42165962	99	+	.	ID=FBgn0000395.1.mrna1.exon5;Name=FBgn0000395.1;Parent=FBgn0000395.1.mrna1;Target=FBgn0000395.1 650 862 +
Chr2	stalkie_big_nohaplotig	exon	42166055	42167457	99	+	.	ID=FBgn0000395.1.mrna1.exon6;Name=FBgn0000395.1;Parent=FBgn0000395.1.mrna1;Target=FBgn0000395.1 863 2265 +
Chr2	stalkie_big_nohaplotig	CDS	42131955	42132234	100	+	0	ID=FBgn0000395.1.mrna1.cds1;Name=FBgn0000395.1;Parent=FBgn0000395.1.mrna1;Target=FBgn0000395.1 1 280 +
Chr2	stalkie_big_nohaplotig	CDS	42139308	42139393	100	+	1	ID=FBgn0000395.1.mrna1.cds2;Name=FBgn0000395.1;Parent=FBgn0000395.1.mrna1;Target=FBgn0000395.1 281 366 +
Chr2	stalkie_big_nohaplotig	CDS	42160365	42160464	99	+	0	ID=FBgn0000395.1.mrna1.cds3;Name=FBgn0000395.1;Parent=FBgn0000395.1.mrna1;Target=FBgn0000395.1 367 466 +
Chr2	stalkie_big_nohaplotig	CDS	42160533	42160715	99	+	1	ID=FBgn0000395.1.mrna1.cds4;Name=FBgn0000395.1;Parent=FBgn0000395.1.mrna1;Target=FBgn0000395.1 467 649 +
Chr2	stalkie_big_nohaplotig	CDS	42165750	42165962	99	+	1	ID=FBgn0000395.1.mrna1.cds5;Name=FBgn0000395.1;Parent=FBgn0000395.1.mrna1;Target=FBgn0000395.1 650 862 +
Chr2	stalkie_big_nohaplotig	CDS	42166055	42167457	99	+	1	ID=FBgn0000395.1.mrna1.cds6;Name=FBgn0000395.1;Parent=FBgn0000395.1.mrna1;Target=FBgn0000395.1 863 2265 +
Chr1	stalkie_big_nohaplotig	mRNA	3758572	3768687	.	+	.	ID=ORF1029.mrna1;Name=ORF1029;Parent=ORF1029.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1272;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	3758572	3758627	100	+	.	ID=ORF1029.mrna1.exon1;Name=ORF1029;Parent=ORF1029.mrna1;Target=ORF1029 1 56 +
Chr1	stalkie_big_nohaplotig	exon	3766756	3766978	100	+	.	ID=ORF1029.mrna1.exon2;Name=ORF1029;Parent=ORF1029.mrna1;Target=ORF1029 57 279 +
Chr1	stalkie_big_nohaplotig	exon	3767695	3768687	100	+	.	ID=ORF1029.mrna1.exon3;Name=ORF1029;Parent=ORF1029.mrna1;Target=ORF1029 280 1272 +
Chr1	stalkie_big_nohaplotig	CDS	3758572	3758627	100	+	0	ID=ORF1029.mrna1.cds1;Name=ORF1029;Parent=ORF1029.mrna1;Target=ORF1029 1 56 +
Chr1	stalkie_big_nohaplotig	CDS	3766756	3766978	100	+	2	ID=ORF1029.mrna1.cds2;Name=ORF1029;Parent=ORF1029.mrna1;Target=ORF1029 57 279 +
Chr1	stalkie_big_nohaplotig	CDS	3767695	3768687	100	+	0	ID=ORF1029.mrna1.cds3;Name=ORF1029;Parent=ORF1029.mrna1;Target=ORF1029 280 1272 +
Chr1	stalkie_big_nohaplotig	mRNA	3787231	3974167	.	-	.	ID=FBgn0011817.1.mrna1;Name=FBgn0011817.1;Parent=FBgn0011817.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1380;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	3973914	3974167	100	-	.	ID=FBgn0011817.1.mrna1.exon1;Name=FBgn0011817.1;Parent=FBgn0011817.1.mrna1;Target=FBgn0011817.1 1 254 +
Chr1	stalkie_big_nohaplotig	exon	3819251	3819380	100	-	.	ID=FBgn0011817.1.mrna1.exon2;Name=FBgn0011817.1;Parent=FBgn0011817.1.mrna1;Target=FBgn0011817.1 255 384 +
Chr1	stalkie_big_nohaplotig	exon	3798425	3798480	100	-	.	ID=FBgn0011817.1.mrna1.exon3;Name=FBgn0011817.1;Parent=FBgn0011817.1.mrna1;Target=FBgn0011817.1 385 440 +
Chr1	stalkie_big_nohaplotig	exon	3793680	3794271	100	-	.	ID=FBgn0011817.1.mrna1.exon4;Name=FBgn0011817.1;Parent=FBgn0011817.1.mrna1;Target=FBgn0011817.1 441 1032 +
Chr1	stalkie_big_nohaplotig	exon	3793411	3793612	100	-	.	ID=FBgn0011817.1.mrna1.exon5;Name=FBgn0011817.1;Parent=FBgn0011817.1.mrna1;Target=FBgn0011817.1 1033 1234 +
Chr1	stalkie_big_nohaplotig	exon	3793163	3793256	100	-	.	ID=FBgn0011817.1.mrna1.exon6;Name=FBgn0011817.1;Parent=FBgn0011817.1.mrna1;Target=FBgn0011817.1 1235 1328 +
Chr1	stalkie_big_nohaplotig	exon	3787231	3787282	100	-	.	ID=FBgn0011817.1.mrna1.exon7;Name=FBgn0011817.1;Parent=FBgn0011817.1.mrna1;Target=FBgn0011817.1 1329 1380 +
Chr1	stalkie_big_nohaplotig	CDS	3973914	3974167	100	-	0	ID=FBgn0011817.1.mrna1.cds1;Name=FBgn0011817.1;Parent=FBgn0011817.1.mrna1;Target=FBgn0011817.1 1 254 +
Chr1	stalkie_big_nohaplotig	CDS	3819251	3819380	100	-	2	ID=FBgn0011817.1.mrna1.cds2;Name=FBgn0011817.1;Parent=FBgn0011817.1.mrna1;Target=FBgn0011817.1 255 384 +
Chr1	stalkie_big_nohaplotig	CDS	3798425	3798480	100	-	0	ID=FBgn0011817.1.mrna1.cds3;Name=FBgn0011817.1;Parent=FBgn0011817.1.mrna1;Target=FBgn0011817.1 385 440 +
Chr1	stalkie_big_nohaplotig	CDS	3793680	3794271	100	-	2	ID=FBgn0011817.1.mrna1.cds4;Name=FBgn0011817.1;Parent=FBgn0011817.1.mrna1;Target=FBgn0011817.1 441 1032 +
Chr1	stalkie_big_nohaplotig	CDS	3793411	3793612	100	-	0	ID=FBgn0011817.1.mrna1.cds5;Name=FBgn0011817.1;Parent=FBgn0011817.1.mrna1;Target=FBgn0011817.1 1033 1234 +
Chr1	stalkie_big_nohaplotig	CDS	3793163	3793256	100	-	1	ID=FBgn0011817.1.mrna1.cds6;Name=FBgn0011817.1;Parent=FBgn0011817.1.mrna1;Target=FBgn0011817.1 1235 1328 +
Chr1	stalkie_big_nohaplotig	CDS	3787231	3787282	100	-	2	ID=FBgn0011817.1.mrna1.cds7;Name=FBgn0011817.1;Parent=FBgn0011817.1.mrna1;Target=FBgn0011817.1 1329 1380 +
Chr2	stalkie_big_nohaplotig	mRNA	125275141	125324638	.	-	.	ID=FBgn0038237.1.mrna1;Name=FBgn0038237.1;Parent=FBgn0038237.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3429;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	125323934	125324638	100	-	.	ID=FBgn0038237.1.mrna1.exon1;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 1 705 +
Chr2	stalkie_big_nohaplotig	exon	125297401	125297662	100	-	.	ID=FBgn0038237.1.mrna1.exon2;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 706 967 +
Chr2	stalkie_big_nohaplotig	exon	125283856	125284367	100	-	.	ID=FBgn0038237.1.mrna1.exon3;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 968 1479 +
Chr2	stalkie_big_nohaplotig	exon	125279845	125279934	100	-	.	ID=FBgn0038237.1.mrna1.exon4;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 1480 1569 +
Chr2	stalkie_big_nohaplotig	exon	125278451	125278738	100	-	.	ID=FBgn0038237.1.mrna1.exon5;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 1570 1857 +
Chr2	stalkie_big_nohaplotig	exon	125278116	125278359	100	-	.	ID=FBgn0038237.1.mrna1.exon6;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 1858 2101 +
Chr2	stalkie_big_nohaplotig	exon	125277964	125278055	100	-	.	ID=FBgn0038237.1.mrna1.exon7;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 2102 2193 +
Chr2	stalkie_big_nohaplotig	exon	125277572	125277895	100	-	.	ID=FBgn0038237.1.mrna1.exon8;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 2194 2517 +
Chr2	stalkie_big_nohaplotig	exon	125277347	125277500	100	-	.	ID=FBgn0038237.1.mrna1.exon9;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 2518 2671 +
Chr2	stalkie_big_nohaplotig	exon	125277129	125277288	100	-	.	ID=FBgn0038237.1.mrna1.exon10;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 2672 2831 +
Chr2	stalkie_big_nohaplotig	exon	125276813	125277033	100	-	.	ID=FBgn0038237.1.mrna1.exon11;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 2832 3052 +
Chr2	stalkie_big_nohaplotig	exon	125275141	125275517	100	-	.	ID=FBgn0038237.1.mrna1.exon12;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 3053 3429 +
Chr2	stalkie_big_nohaplotig	CDS	125323934	125324638	100	-	0	ID=FBgn0038237.1.mrna1.cds1;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 1 705 +
Chr2	stalkie_big_nohaplotig	CDS	125297401	125297662	100	-	0	ID=FBgn0038237.1.mrna1.cds2;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 706 967 +
Chr2	stalkie_big_nohaplotig	CDS	125283856	125284367	100	-	1	ID=FBgn0038237.1.mrna1.cds3;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 968 1479 +
Chr2	stalkie_big_nohaplotig	CDS	125279845	125279934	100	-	0	ID=FBgn0038237.1.mrna1.cds4;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 1480 1569 +
Chr2	stalkie_big_nohaplotig	CDS	125278451	125278738	100	-	0	ID=FBgn0038237.1.mrna1.cds5;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 1570 1857 +
Chr2	stalkie_big_nohaplotig	CDS	125278116	125278359	100	-	0	ID=FBgn0038237.1.mrna1.cds6;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 1858 2101 +
Chr2	stalkie_big_nohaplotig	CDS	125277964	125278055	100	-	1	ID=FBgn0038237.1.mrna1.cds7;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 2102 2193 +
Chr2	stalkie_big_nohaplotig	CDS	125277572	125277895	100	-	0	ID=FBgn0038237.1.mrna1.cds8;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 2194 2517 +
Chr2	stalkie_big_nohaplotig	CDS	125277347	125277500	100	-	0	ID=FBgn0038237.1.mrna1.cds9;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 2518 2671 +
Chr2	stalkie_big_nohaplotig	CDS	125277129	125277288	100	-	1	ID=FBgn0038237.1.mrna1.cds10;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 2672 2831 +
Chr2	stalkie_big_nohaplotig	CDS	125276813	125277033	100	-	2	ID=FBgn0038237.1.mrna1.cds11;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 2832 3052 +
Chr2	stalkie_big_nohaplotig	CDS	125275141	125275517	100	-	1	ID=FBgn0038237.1.mrna1.cds12;Name=FBgn0038237.1;Parent=FBgn0038237.1.mrna1;Target=FBgn0038237.1 3053 3429 +
ChrX	stalkie_big_nohaplotig	mRNA	2972126	2972275	.	-	.	ID=FBgn0033257.1.mrna2;Name=FBgn0033257.1;Parent=FBgn0033257.1.path2;Dir=indeterminatecoverage=14.1;identity=100.0;matches=150;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	2972126	2972275	100	-	.	ID=FBgn0033257.1.mrna2.exon1;Name=FBgn0033257.1;Parent=FBgn0033257.1.mrna2;Target=FBgn0033257.1 1062 913 .
Chr1	stalkie_big_nohaplotig	mRNA	157823997	157826942	.	+	.	ID=FBgn0030569.1.mrna1;Name=FBgn0030569.1;Parent=FBgn0030569.1.path1;Dir=sensecoverage=94.3;identity=99.5;matches=2883;mismatches=3;indels=12;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	157823997	157825136	99	+	.	ID=FBgn0030569.1.mrna1.exon1;Name=FBgn0030569.1;Parent=FBgn0030569.1.mrna1;Target=FBgn0030569.1 175 1314 +
Chr1	stalkie_big_nohaplotig	exon	157825197	157826942	99	+	.	ID=FBgn0030569.1.mrna1.exon2;Name=FBgn0030569.1;Parent=FBgn0030569.1.mrna1;Target=FBgn0030569.1 1315 3072 +
Chr1	stalkie_big_nohaplotig	CDS	157823997	157825136	99	+	0	ID=FBgn0030569.1.mrna1.cds1;Name=FBgn0030569.1;Parent=FBgn0030569.1.mrna1;Target=FBgn0030569.1 175 1314 +
Chr1	stalkie_big_nohaplotig	CDS	157825197	157826942	99	+	0	ID=FBgn0030569.1.mrna1.cds2;Name=FBgn0030569.1;Parent=FBgn0030569.1.mrna1;Target=FBgn0030569.1 1315 3072 +
Chr2	stalkie_big_nohaplotig	mRNA	154736664	154747427	.	-	.	ID=FBgn0261285.1.mrna1;Name=FBgn0261285.1;Parent=FBgn0261285.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=944;mismatches=4;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	154747293	154747427	100	-	.	ID=FBgn0261285.1.mrna1.exon1;Name=FBgn0261285.1;Parent=FBgn0261285.1.mrna1;Target=FBgn0261285.1 1 135 +
Chr2	stalkie_big_nohaplotig	exon	154745521	154745964	99	-	.	ID=FBgn0261285.1.mrna1.exon2;Name=FBgn0261285.1;Parent=FBgn0261285.1.mrna1;Target=FBgn0261285.1 136 579 +
Chr2	stalkie_big_nohaplotig	exon	154739516	154739701	100	-	.	ID=FBgn0261285.1.mrna1.exon3;Name=FBgn0261285.1;Parent=FBgn0261285.1.mrna1;Target=FBgn0261285.1 580 765 +
Chr2	stalkie_big_nohaplotig	exon	154736871	154737008	99	-	.	ID=FBgn0261285.1.mrna1.exon4;Name=FBgn0261285.1;Parent=FBgn0261285.1.mrna1;Target=FBgn0261285.1 766 903 +
Chr2	stalkie_big_nohaplotig	exon	154736664	154736708	100	-	.	ID=FBgn0261285.1.mrna1.exon5;Name=FBgn0261285.1;Parent=FBgn0261285.1.mrna1;Target=FBgn0261285.1 904 948 +
Chr2	stalkie_big_nohaplotig	CDS	154747293	154747427	100	-	0	ID=FBgn0261285.1.mrna1.cds1;Name=FBgn0261285.1;Parent=FBgn0261285.1.mrna1;Target=FBgn0261285.1 1 135 +
Chr2	stalkie_big_nohaplotig	CDS	154745521	154745964	99	-	0	ID=FBgn0261285.1.mrna1.cds2;Name=FBgn0261285.1;Parent=FBgn0261285.1.mrna1;Target=FBgn0261285.1 136 579 +
Chr2	stalkie_big_nohaplotig	CDS	154739516	154739701	100	-	0	ID=FBgn0261285.1.mrna1.cds3;Name=FBgn0261285.1;Parent=FBgn0261285.1.mrna1;Target=FBgn0261285.1 580 765 +
Chr2	stalkie_big_nohaplotig	CDS	154736871	154737008	99	-	0	ID=FBgn0261285.1.mrna1.cds4;Name=FBgn0261285.1;Parent=FBgn0261285.1.mrna1;Target=FBgn0261285.1 766 903 +
Chr2	stalkie_big_nohaplotig	CDS	154736664	154736708	100	-	0	ID=FBgn0261285.1.mrna1.cds5;Name=FBgn0261285.1;Parent=FBgn0261285.1.mrna1;Target=FBgn0261285.1 904 948 +
Chr1	stalkie_big_nohaplotig	mRNA	155321593	155321952	.	+	.	ID=FBgn0030815.mrna1;Name=FBgn0030815;Parent=FBgn0030815.path1;Dir=indeterminatecoverage=98.4;identity=99.7;matches=359;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	155321593	155321952	99	+	.	ID=FBgn0030815.mrna1.exon1;Name=FBgn0030815;Parent=FBgn0030815.mrna1;Target=FBgn0030815 360 1 .
Chr1	stalkie_big_nohaplotig	CDS	155321593	155321952	99	+	0	ID=FBgn0030815.mrna1.cds1;Name=FBgn0030815;Parent=FBgn0030815.mrna1;Target=FBgn0030815 360 1 .
ChrX	stalkie_big_nohaplotig	mRNA	56340481	56347045	.	+	.	ID=FBgn0019890.3.mrna1;Name=FBgn0019890.3;Parent=FBgn0019890.3.path1;Dir=sensecoverage=99.7;identity=99.9;matches=3665;mismatches=2;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	56340481	56340621	100	+	.	ID=FBgn0019890.3.mrna1.exon1;Name=FBgn0019890.3;Parent=FBgn0019890.3.mrna1;Target=FBgn0019890.3 12 152 +
ChrX	stalkie_big_nohaplotig	exon	56342669	56344368	99	+	.	ID=FBgn0019890.3.mrna1.exon2;Name=FBgn0019890.3;Parent=FBgn0019890.3.mrna1;Target=FBgn0019890.3 153 1852 +
ChrX	stalkie_big_nohaplotig	exon	56344445	56345742	99	+	.	ID=FBgn0019890.3.mrna1.exon3;Name=FBgn0019890.3;Parent=FBgn0019890.3.mrna1;Target=FBgn0019890.3 1853 3150 +
ChrX	stalkie_big_nohaplotig	exon	56345809	56345938	100	+	.	ID=FBgn0019890.3.mrna1.exon4;Name=FBgn0019890.3;Parent=FBgn0019890.3.mrna1;Target=FBgn0019890.3 3151 3280 +
ChrX	stalkie_big_nohaplotig	exon	56346009	56346167	100	+	.	ID=FBgn0019890.3.mrna1.exon5;Name=FBgn0019890.3;Parent=FBgn0019890.3.mrna1;Target=FBgn0019890.3 3281 3439 +
ChrX	stalkie_big_nohaplotig	exon	56346807	56347045	100	+	.	ID=FBgn0019890.3.mrna1.exon6;Name=FBgn0019890.3;Parent=FBgn0019890.3.mrna1;Target=FBgn0019890.3 3440 3678 +
ChrX	stalkie_big_nohaplotig	CDS	56340482	56340621	100	+	0	ID=FBgn0019890.3.mrna1.cds1;Name=FBgn0019890.3;Parent=FBgn0019890.3.mrna1;Target=FBgn0019890.3 13 152 +
ChrX	stalkie_big_nohaplotig	CDS	56342669	56344368	99	+	2	ID=FBgn0019890.3.mrna1.cds2;Name=FBgn0019890.3;Parent=FBgn0019890.3.mrna1;Target=FBgn0019890.3 153 1852 +
ChrX	stalkie_big_nohaplotig	CDS	56344445	56345742	99	+	1	ID=FBgn0019890.3.mrna1.cds3;Name=FBgn0019890.3;Parent=FBgn0019890.3.mrna1;Target=FBgn0019890.3 1853 3150 +
ChrX	stalkie_big_nohaplotig	CDS	56345809	56345938	100	+	0	ID=FBgn0019890.3.mrna1.cds4;Name=FBgn0019890.3;Parent=FBgn0019890.3.mrna1;Target=FBgn0019890.3 3151 3280 +
ChrX	stalkie_big_nohaplotig	CDS	56346009	56346167	100	+	1	ID=FBgn0019890.3.mrna1.cds5;Name=FBgn0019890.3;Parent=FBgn0019890.3.mrna1;Target=FBgn0019890.3 3281 3439 +
ChrX	stalkie_big_nohaplotig	CDS	56346807	56347045	100	+	1	ID=FBgn0019890.3.mrna1.cds6;Name=FBgn0019890.3;Parent=FBgn0019890.3.mrna1;Target=FBgn0019890.3 3440 3678 +
Chr2	stalkie_big_nohaplotig	mRNA	36031406	36032920	.	-	.	ID=FBgn0029733.2.mrna1;Name=FBgn0029733.2;Parent=FBgn0029733.2.path1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1503;mismatches=12;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	36031406	36032920	99	-	.	ID=FBgn0029733.2.mrna1.exon1;Name=FBgn0029733.2;Parent=FBgn0029733.2.mrna1;Target=FBgn0029733.2 1515 1 .
Chr2	stalkie_big_nohaplotig	CDS	36031406	36032920	99	-	0	ID=FBgn0029733.2.mrna1.cds1;Name=FBgn0029733.2;Parent=FBgn0029733.2.mrna1;Target=FBgn0029733.2 1515 1 .
Chr1	stalkie_big_nohaplotig	mRNA	68416775	68418481	.	-	.	ID=FBgn0053260.1.mrna2;Name=FBgn0053260.1;Parent=FBgn0053260.1.path2;Dir=sensecoverage=100.0;identity=99.3;matches=1028;mismatches=7;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	68418385	68418481	98	-	.	ID=FBgn0053260.1.mrna2.exon1;Name=FBgn0053260.1;Parent=FBgn0053260.1.mrna2;Target=FBgn0053260.1 1 97 +
Chr1	stalkie_big_nohaplotig	exon	68417795	68417881	100	-	.	ID=FBgn0053260.1.mrna2.exon2;Name=FBgn0053260.1;Parent=FBgn0053260.1.mrna2;Target=FBgn0053260.1 98 184 +
Chr1	stalkie_big_nohaplotig	exon	68417464	68417736	98	-	.	ID=FBgn0053260.1.mrna2.exon3;Name=FBgn0053260.1;Parent=FBgn0053260.1.mrna2;Target=FBgn0053260.1 185 457 +
Chr1	stalkie_big_nohaplotig	exon	68417298	68417402	98	-	.	ID=FBgn0053260.1.mrna2.exon4;Name=FBgn0053260.1;Parent=FBgn0053260.1.mrna2;Target=FBgn0053260.1 458 562 +
Chr1	stalkie_big_nohaplotig	exon	68416775	68417247	99	-	.	ID=FBgn0053260.1.mrna2.exon5;Name=FBgn0053260.1;Parent=FBgn0053260.1.mrna2;Target=FBgn0053260.1 563 1035 +
Chr1	stalkie_big_nohaplotig	CDS	68418385	68418481	98	-	0	ID=FBgn0053260.1.mrna2.cds1;Name=FBgn0053260.1;Parent=FBgn0053260.1.mrna2;Target=FBgn0053260.1 1 97 +
Chr1	stalkie_big_nohaplotig	CDS	68417795	68417881	100	-	1	ID=FBgn0053260.1.mrna2.cds2;Name=FBgn0053260.1;Parent=FBgn0053260.1.mrna2;Target=FBgn0053260.1 98 184 +
Chr1	stalkie_big_nohaplotig	CDS	68417464	68417736	98	-	1	ID=FBgn0053260.1.mrna2.cds3;Name=FBgn0053260.1;Parent=FBgn0053260.1.mrna2;Target=FBgn0053260.1 185 457 +
Chr1	stalkie_big_nohaplotig	CDS	68417298	68417402	98	-	1	ID=FBgn0053260.1.mrna2.cds4;Name=FBgn0053260.1;Parent=FBgn0053260.1.mrna2;Target=FBgn0053260.1 458 562 +
Chr1	stalkie_big_nohaplotig	CDS	68416775	68417247	99	-	1	ID=FBgn0053260.1.mrna2.cds5;Name=FBgn0053260.1;Parent=FBgn0053260.1.mrna2;Target=FBgn0053260.1 563 1035 +
Chr2	stalkie_big_nohaplotig	mRNA	35960539	35962010	.	-	.	ID=FBgn0022984.1.mrna1;Name=FBgn0022984.1;Parent=FBgn0022984.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=967;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	35961836	35962010	100	-	.	ID=FBgn0022984.1.mrna1.exon1;Name=FBgn0022984.1;Parent=FBgn0022984.1.mrna1;Target=FBgn0022984.1 1 175 +
Chr2	stalkie_big_nohaplotig	exon	35961465	35961586	100	-	.	ID=FBgn0022984.1.mrna1.exon2;Name=FBgn0022984.1;Parent=FBgn0022984.1.mrna1;Target=FBgn0022984.1 176 297 +
Chr2	stalkie_big_nohaplotig	exon	35961033	35961397	99	-	.	ID=FBgn0022984.1.mrna1.exon3;Name=FBgn0022984.1;Parent=FBgn0022984.1.mrna1;Target=FBgn0022984.1 298 662 +
Chr2	stalkie_big_nohaplotig	exon	35960882	35960977	100	-	.	ID=FBgn0022984.1.mrna1.exon4;Name=FBgn0022984.1;Parent=FBgn0022984.1.mrna1;Target=FBgn0022984.1 663 758 +
Chr2	stalkie_big_nohaplotig	exon	35960740	35960819	100	-	.	ID=FBgn0022984.1.mrna1.exon5;Name=FBgn0022984.1;Parent=FBgn0022984.1.mrna1;Target=FBgn0022984.1 759 838 +
Chr2	stalkie_big_nohaplotig	exon	35960539	35960669	100	-	.	ID=FBgn0022984.1.mrna1.exon6;Name=FBgn0022984.1;Parent=FBgn0022984.1.mrna1;Target=FBgn0022984.1 839 969 +
Chr2	stalkie_big_nohaplotig	CDS	35961836	35962010	100	-	0	ID=FBgn0022984.1.mrna1.cds1;Name=FBgn0022984.1;Parent=FBgn0022984.1.mrna1;Target=FBgn0022984.1 1 175 +
Chr2	stalkie_big_nohaplotig	CDS	35961465	35961586	100	-	1	ID=FBgn0022984.1.mrna1.cds2;Name=FBgn0022984.1;Parent=FBgn0022984.1.mrna1;Target=FBgn0022984.1 176 297 +
Chr2	stalkie_big_nohaplotig	CDS	35961033	35961397	99	-	0	ID=FBgn0022984.1.mrna1.cds3;Name=FBgn0022984.1;Parent=FBgn0022984.1.mrna1;Target=FBgn0022984.1 298 662 +
Chr2	stalkie_big_nohaplotig	CDS	35960882	35960977	100	-	2	ID=FBgn0022984.1.mrna1.cds4;Name=FBgn0022984.1;Parent=FBgn0022984.1.mrna1;Target=FBgn0022984.1 663 758 +
Chr2	stalkie_big_nohaplotig	CDS	35960740	35960819	100	-	2	ID=FBgn0022984.1.mrna1.cds5;Name=FBgn0022984.1;Parent=FBgn0022984.1.mrna1;Target=FBgn0022984.1 759 838 +
Chr2	stalkie_big_nohaplotig	CDS	35960539	35960669	100	-	1	ID=FBgn0022984.1.mrna1.cds6;Name=FBgn0022984.1;Parent=FBgn0022984.1.mrna1;Target=FBgn0022984.1 839 969 +
Chr1	stalkie_big_nohaplotig	mRNA	56528818	56532611	.	-	.	ID=FBgn0031078.1.mrna1;Name=FBgn0031078.1;Parent=FBgn0031078.1.path1;Dir=sensecoverage=59.5;identity=99.9;matches=2985;mismatches=2;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	56532410	56532611	100	-	.	ID=FBgn0031078.1.mrna1.exon1;Name=FBgn0031078.1;Parent=FBgn0031078.1.mrna1;Target=FBgn0031078.1 2018 2219 +
Chr1	stalkie_big_nohaplotig	exon	56531000	56531849	99	-	.	ID=FBgn0031078.1.mrna1.exon2;Name=FBgn0031078.1;Parent=FBgn0031078.1.mrna1;Target=FBgn0031078.1 2220 3069 +
Chr1	stalkie_big_nohaplotig	exon	56530198	56530938	100	-	.	ID=FBgn0031078.1.mrna1.exon3;Name=FBgn0031078.1;Parent=FBgn0031078.1.mrna1;Target=FBgn0031078.1 3070 3810 +
Chr1	stalkie_big_nohaplotig	exon	56529943	56530147	100	-	.	ID=FBgn0031078.1.mrna1.exon4;Name=FBgn0031078.1;Parent=FBgn0031078.1.mrna1;Target=FBgn0031078.1 3811 4015 +
Chr1	stalkie_big_nohaplotig	exon	56529651	56529897	100	-	.	ID=FBgn0031078.1.mrna1.exon5;Name=FBgn0031078.1;Parent=FBgn0031078.1.mrna1;Target=FBgn0031078.1 4016 4262 +
Chr1	stalkie_big_nohaplotig	exon	56528818	56529559	99	-	.	ID=FBgn0031078.1.mrna1.exon6;Name=FBgn0031078.1;Parent=FBgn0031078.1.mrna1;Target=FBgn0031078.1 4263 5005 +
Chr1	stalkie_big_nohaplotig	CDS	56532410	56532609	100	-	0	ID=FBgn0031078.1.mrna1.cds1;Name=FBgn0031078.1;Parent=FBgn0031078.1.mrna1;Target=FBgn0031078.1 2020 2219 +
Chr1	stalkie_big_nohaplotig	CDS	56531000	56531849	99	-	2	ID=FBgn0031078.1.mrna1.cds2;Name=FBgn0031078.1;Parent=FBgn0031078.1.mrna1;Target=FBgn0031078.1 2220 3069 +
Chr1	stalkie_big_nohaplotig	CDS	56530198	56530938	100	-	0	ID=FBgn0031078.1.mrna1.cds3;Name=FBgn0031078.1;Parent=FBgn0031078.1.mrna1;Target=FBgn0031078.1 3070 3810 +
Chr1	stalkie_big_nohaplotig	CDS	56529943	56530147	100	-	0	ID=FBgn0031078.1.mrna1.cds4;Name=FBgn0031078.1;Parent=FBgn0031078.1.mrna1;Target=FBgn0031078.1 3811 4015 +
Chr1	stalkie_big_nohaplotig	CDS	56529651	56529897	100	-	1	ID=FBgn0031078.1.mrna1.cds5;Name=FBgn0031078.1;Parent=FBgn0031078.1.mrna1;Target=FBgn0031078.1 4016 4262 +
Chr1	stalkie_big_nohaplotig	CDS	56528819	56529559	99	-	2	ID=FBgn0031078.1.mrna1.cds6;Name=FBgn0031078.1;Parent=FBgn0031078.1.mrna1;Target=FBgn0031078.1 4263 5004 +
Chr1	stalkie_big_nohaplotig	mRNA	137995601	138000091	.	+	.	ID=FBgn0023510.1.mrna1;Name=FBgn0023510.1;Parent=FBgn0023510.1.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=4488;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	137995601	138000091	99	+	.	ID=FBgn0023510.1.mrna1.exon1;Name=FBgn0023510.1;Parent=FBgn0023510.1.mrna1;Target=FBgn0023510.1 4491 1 .
Chr1	stalkie_big_nohaplotig	CDS	137995601	138000091	99	+	0	ID=FBgn0023510.1.mrna1.cds1;Name=FBgn0023510.1;Parent=FBgn0023510.1.mrna1;Target=FBgn0023510.1 4491 1 .
Chr2	stalkie_big_nohaplotig	mRNA	152033647	152045142	.	+	.	ID=FBgn0011278.1.mrna1;Name=FBgn0011278.1;Parent=FBgn0011278.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=1369;mismatches=7;indels=0;unknowns=1
Chr2	stalkie_big_nohaplotig	exon	152033647	152034691	99	+	.	ID=FBgn0011278.1.mrna1.exon1;Name=FBgn0011278.1;Parent=FBgn0011278.1.mrna1;Target=FBgn0011278.1 1 1045 +
Chr2	stalkie_big_nohaplotig	exon	152044811	152045142	99	+	.	ID=FBgn0011278.1.mrna1.exon2;Name=FBgn0011278.1;Parent=FBgn0011278.1.mrna1;Target=FBgn0011278.1 1046 1377 +
Chr2	stalkie_big_nohaplotig	CDS	152033647	152034691	99	+	0	ID=FBgn0011278.1.mrna1.cds1;Name=FBgn0011278.1;Parent=FBgn0011278.1.mrna1;Target=FBgn0011278.1 1 1045 +
Chr2	stalkie_big_nohaplotig	CDS	152044811	152045142	99	+	1	ID=FBgn0011278.1.mrna1.cds2;Name=FBgn0011278.1;Parent=FBgn0011278.1.mrna1;Target=FBgn0011278.1 1046 1377 +
Chr1	stalkie_big_nohaplotig	mRNA	153613914	153682452	.	-	.	ID=FBgn0052698.1.mrna1;Name=FBgn0052698.1;Parent=FBgn0052698.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=979;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	153682392	153682452	100	-	.	ID=FBgn0052698.1.mrna1.exon1;Name=FBgn0052698.1;Parent=FBgn0052698.1.mrna1;Target=FBgn0052698.1 1 61 +
Chr1	stalkie_big_nohaplotig	exon	153649843	153649893	100	-	.	ID=FBgn0052698.1.mrna1.exon2;Name=FBgn0052698.1;Parent=FBgn0052698.1.mrna1;Target=FBgn0052698.1 62 112 +
Chr1	stalkie_big_nohaplotig	exon	153638924	153639060	100	-	.	ID=FBgn0052698.1.mrna1.exon3;Name=FBgn0052698.1;Parent=FBgn0052698.1.mrna1;Target=FBgn0052698.1 113 249 +
Chr1	stalkie_big_nohaplotig	exon	153638646	153638858	98	-	.	ID=FBgn0052698.1.mrna1.exon4;Name=FBgn0052698.1;Parent=FBgn0052698.1.mrna1;Target=FBgn0052698.1 250 462 +
Chr1	stalkie_big_nohaplotig	exon	153625278	153625373	100	-	.	ID=FBgn0052698.1.mrna1.exon5;Name=FBgn0052698.1;Parent=FBgn0052698.1.mrna1;Target=FBgn0052698.1 463 558 +
Chr1	stalkie_big_nohaplotig	exon	153624827	153625048	99	-	.	ID=FBgn0052698.1.mrna1.exon6;Name=FBgn0052698.1;Parent=FBgn0052698.1.mrna1;Target=FBgn0052698.1 559 780 +
Chr1	stalkie_big_nohaplotig	exon	153614141	153614324	100	-	.	ID=FBgn0052698.1.mrna1.exon7;Name=FBgn0052698.1;Parent=FBgn0052698.1.mrna1;Target=FBgn0052698.1 781 964 +
Chr1	stalkie_big_nohaplotig	exon	153613914	153613933	100	-	.	ID=FBgn0052698.1.mrna1.exon8;Name=FBgn0052698.1;Parent=FBgn0052698.1.mrna1;Target=FBgn0052698.1 965 984 +
Chr1	stalkie_big_nohaplotig	CDS	153682392	153682452	100	-	0	ID=FBgn0052698.1.mrna1.cds1;Name=FBgn0052698.1;Parent=FBgn0052698.1.mrna1;Target=FBgn0052698.1 1 61 +
Chr1	stalkie_big_nohaplotig	CDS	153649843	153649893	100	-	1	ID=FBgn0052698.1.mrna1.cds2;Name=FBgn0052698.1;Parent=FBgn0052698.1.mrna1;Target=FBgn0052698.1 62 112 +
Chr1	stalkie_big_nohaplotig	CDS	153638924	153639060	100	-	1	ID=FBgn0052698.1.mrna1.cds3;Name=FBgn0052698.1;Parent=FBgn0052698.1.mrna1;Target=FBgn0052698.1 113 249 +
Chr1	stalkie_big_nohaplotig	CDS	153638646	153638858	98	-	0	ID=FBgn0052698.1.mrna1.cds4;Name=FBgn0052698.1;Parent=FBgn0052698.1.mrna1;Target=FBgn0052698.1 250 462 +
Chr1	stalkie_big_nohaplotig	CDS	153625278	153625373	100	-	0	ID=FBgn0052698.1.mrna1.cds5;Name=FBgn0052698.1;Parent=FBgn0052698.1.mrna1;Target=FBgn0052698.1 463 558 +
Chr1	stalkie_big_nohaplotig	CDS	153624827	153625048	99	-	0	ID=FBgn0052698.1.mrna1.cds6;Name=FBgn0052698.1;Parent=FBgn0052698.1.mrna1;Target=FBgn0052698.1 559 780 +
Chr1	stalkie_big_nohaplotig	CDS	153614141	153614324	100	-	0	ID=FBgn0052698.1.mrna1.cds7;Name=FBgn0052698.1;Parent=FBgn0052698.1.mrna1;Target=FBgn0052698.1 781 964 +
Chr1	stalkie_big_nohaplotig	CDS	153613914	153613933	100	-	1	ID=FBgn0052698.1.mrna1.cds8;Name=FBgn0052698.1;Parent=FBgn0052698.1.mrna1;Target=FBgn0052698.1 965 984 +
ChrX	stalkie_big_nohaplotig	mRNA	24474126	24474946	.	-	.	ID=ORF2603.mrna1;Name=ORF2603;Parent=ORF2603.path1;Dir=indeterminatecoverage=98.4;identity=97.1;matches=797;mismatches=24;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	24474126	24474946	97	-	.	ID=ORF2603.mrna1.exon1;Name=ORF2603;Parent=ORF2603.mrna1;Target=ORF2603 821 1 .
ChrX	stalkie_big_nohaplotig	CDS	24474128	24474946	97	-	0	ID=ORF2603.mrna1.cds1;Name=ORF2603;Parent=ORF2603.mrna1;Target=ORF2603 819 1 .
ChrX	stalkie_big_nohaplotig	mRNA	24440890	24442237	.	-	.	ID=ORF906.mrna1;Name=ORF906;Parent=ORF906.path1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1337;mismatches=11;indels=5;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	24440890	24442237	98	-	.	ID=ORF906.mrna1.exon1;Name=ORF906;Parent=ORF906.mrna1;Target=ORF906 1353 1 .
ChrX	stalkie_big_nohaplotig	CDS	24442182	24442236	91	-	0	ID=ORF906.mrna1.cds1;Name=ORF906;Parent=ORF906.mrna1;Target=ORF906 61 2 .
Chr1	stalkie_big_nohaplotig	mRNA	114605917	114607577	.	+	.	ID=FBgn0069973.1.mrna1;Name=FBgn0069973.1;Parent=FBgn0069973.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=750;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	114605917	114606492	100	+	.	ID=FBgn0069973.1.mrna1.exon1;Name=FBgn0069973.1;Parent=FBgn0069973.1.mrna1;Target=FBgn0069973.1 1 576 +
Chr1	stalkie_big_nohaplotig	exon	114607404	114607577	100	+	.	ID=FBgn0069973.1.mrna1.exon2;Name=FBgn0069973.1;Parent=FBgn0069973.1.mrna1;Target=FBgn0069973.1 577 750 +
Chr1	stalkie_big_nohaplotig	CDS	114605917	114606492	100	+	0	ID=FBgn0069973.1.mrna1.cds1;Name=FBgn0069973.1;Parent=FBgn0069973.1.mrna1;Target=FBgn0069973.1 1 576 +
Chr1	stalkie_big_nohaplotig	CDS	114607404	114607577	100	+	0	ID=FBgn0069973.1.mrna1.cds2;Name=FBgn0069973.1;Parent=FBgn0069973.1.mrna1;Target=FBgn0069973.1 577 750 +
Chr1	stalkie_big_nohaplotig	mRNA	2670043	2671037	.	-	.	ID=FBgn0035760.1.mrna1;Name=FBgn0035760.1;Parent=FBgn0035760.1.path1;Dir=sensecoverage=99.5;identity=99.5;matches=802;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	2670873	2671037	97	-	.	ID=FBgn0035760.1.mrna1.exon1;Name=FBgn0035760.1;Parent=FBgn0035760.1.mrna1;Target=FBgn0035760.1 5 169 +
Chr1	stalkie_big_nohaplotig	exon	2670731	2670813	100	-	.	ID=FBgn0035760.1.mrna1.exon2;Name=FBgn0035760.1;Parent=FBgn0035760.1.mrna1;Target=FBgn0035760.1 170 252 +
Chr1	stalkie_big_nohaplotig	exon	2670235	2670661	100	-	.	ID=FBgn0035760.1.mrna1.exon3;Name=FBgn0035760.1;Parent=FBgn0035760.1.mrna1;Target=FBgn0035760.1 253 679 +
Chr1	stalkie_big_nohaplotig	exon	2670043	2670173	100	-	.	ID=FBgn0035760.1.mrna1.exon4;Name=FBgn0035760.1;Parent=FBgn0035760.1.mrna1;Target=FBgn0035760.1 680 810 +
Chr1	stalkie_big_nohaplotig	CDS	2670873	2670948	100	-	0	ID=FBgn0035760.1.mrna1.cds1;Name=FBgn0035760.1;Parent=FBgn0035760.1.mrna1;Target=FBgn0035760.1 94 169 +
Chr1	stalkie_big_nohaplotig	CDS	2670731	2670813	100	-	1	ID=FBgn0035760.1.mrna1.cds2;Name=FBgn0035760.1;Parent=FBgn0035760.1.mrna1;Target=FBgn0035760.1 170 252 +
Chr1	stalkie_big_nohaplotig	CDS	2670235	2670661	100	-	0	ID=FBgn0035760.1.mrna1.cds3;Name=FBgn0035760.1;Parent=FBgn0035760.1.mrna1;Target=FBgn0035760.1 253 679 +
Chr1	stalkie_big_nohaplotig	CDS	2670043	2670173	100	-	1	ID=FBgn0035760.1.mrna1.cds4;Name=FBgn0035760.1;Parent=FBgn0035760.1.mrna1;Target=FBgn0035760.1 680 810 +
Chr2	stalkie_big_nohaplotig	mRNA	141459203	141460140	.	+	.	ID=FBgn0024558.1.mrna1;Name=FBgn0024558.1;Parent=FBgn0024558.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=871;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	141459203	141459370	100	+	.	ID=FBgn0024558.1.mrna1.exon1;Name=FBgn0024558.1;Parent=FBgn0024558.1.mrna1;Target=FBgn0024558.1 1 168 +
Chr2	stalkie_big_nohaplotig	exon	141459436	141460140	99	+	.	ID=FBgn0024558.1.mrna1.exon2;Name=FBgn0024558.1;Parent=FBgn0024558.1.mrna1;Target=FBgn0024558.1 169 873 +
Chr2	stalkie_big_nohaplotig	CDS	141459203	141459370	100	+	0	ID=FBgn0024558.1.mrna1.cds1;Name=FBgn0024558.1;Parent=FBgn0024558.1.mrna1;Target=FBgn0024558.1 1 168 +
Chr2	stalkie_big_nohaplotig	CDS	141459436	141460140	99	+	0	ID=FBgn0024558.1.mrna1.cds2;Name=FBgn0024558.1;Parent=FBgn0024558.1.mrna1;Target=FBgn0024558.1 169 873 +
Chr1	stalkie_big_nohaplotig	mRNA	126165891	126166805	.	-	.	ID=ORF2113.mrna1;Name=ORF2113;Parent=ORF2113.path1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=912;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	126165891	126166805	99	-	.	ID=ORF2113.mrna1.exon1;Name=ORF2113;Parent=ORF2113.mrna1;Target=ORF2113 915 1 .
Chr1	stalkie_big_nohaplotig	CDS	126165891	126166805	99	-	0	ID=ORF2113.mrna1.cds1;Name=ORF2113;Parent=ORF2113.mrna1;Target=ORF2113 915 1 .
Chr1	stalkie_big_nohaplotig	mRNA	166556917	166559733	.	-	.	ID=FBgn0030603.1.mrna1;Name=FBgn0030603.1;Parent=FBgn0030603.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1457;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	166559476	166559733	99	-	.	ID=FBgn0030603.1.mrna1.exon1;Name=FBgn0030603.1;Parent=FBgn0030603.1.mrna1;Target=FBgn0030603.1 1 258 +
Chr1	stalkie_big_nohaplotig	exon	166559031	166559240	99	-	.	ID=FBgn0030603.1.mrna1.exon2;Name=FBgn0030603.1;Parent=FBgn0030603.1.mrna1;Target=FBgn0030603.1 259 468 +
Chr1	stalkie_big_nohaplotig	exon	166557930	166558097	100	-	.	ID=FBgn0030603.1.mrna1.exon3;Name=FBgn0030603.1;Parent=FBgn0030603.1.mrna1;Target=FBgn0030603.1 469 636 +
Chr1	stalkie_big_nohaplotig	exon	166557704	166557863	100	-	.	ID=FBgn0030603.1.mrna1.exon4;Name=FBgn0030603.1;Parent=FBgn0030603.1.mrna1;Target=FBgn0030603.1 637 796 +
Chr1	stalkie_big_nohaplotig	exon	166557510	166557641	100	-	.	ID=FBgn0030603.1.mrna1.exon5;Name=FBgn0030603.1;Parent=FBgn0030603.1.mrna1;Target=FBgn0030603.1 797 928 +
Chr1	stalkie_big_nohaplotig	exon	166556917	166557449	99	-	.	ID=FBgn0030603.1.mrna1.exon6;Name=FBgn0030603.1;Parent=FBgn0030603.1.mrna1;Target=FBgn0030603.1 929 1461 +
Chr1	stalkie_big_nohaplotig	CDS	166559476	166559733	99	-	0	ID=FBgn0030603.1.mrna1.cds1;Name=FBgn0030603.1;Parent=FBgn0030603.1.mrna1;Target=FBgn0030603.1 1 258 +
Chr1	stalkie_big_nohaplotig	CDS	166559031	166559240	99	-	0	ID=FBgn0030603.1.mrna1.cds2;Name=FBgn0030603.1;Parent=FBgn0030603.1.mrna1;Target=FBgn0030603.1 259 468 +
Chr1	stalkie_big_nohaplotig	CDS	166557930	166558097	100	-	0	ID=FBgn0030603.1.mrna1.cds3;Name=FBgn0030603.1;Parent=FBgn0030603.1.mrna1;Target=FBgn0030603.1 469 636 +
Chr1	stalkie_big_nohaplotig	CDS	166557704	166557863	100	-	0	ID=FBgn0030603.1.mrna1.cds4;Name=FBgn0030603.1;Parent=FBgn0030603.1.mrna1;Target=FBgn0030603.1 637 796 +
Chr1	stalkie_big_nohaplotig	CDS	166557510	166557641	100	-	1	ID=FBgn0030603.1.mrna1.cds5;Name=FBgn0030603.1;Parent=FBgn0030603.1.mrna1;Target=FBgn0030603.1 797 928 +
Chr1	stalkie_big_nohaplotig	CDS	166556917	166557449	99	-	1	ID=FBgn0030603.1.mrna1.cds6;Name=FBgn0030603.1;Parent=FBgn0030603.1.mrna1;Target=FBgn0030603.1 929 1461 +
Chr1	stalkie_big_nohaplotig	mRNA	44790775	44856578	.	-	.	ID=FBgn0001085.1.mrna1;Name=FBgn0001085.1;Parent=FBgn0001085.1.path1;Dir=sensecoverage=70.5;identity=99.5;matches=1255;mismatches=6;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	44855859	44856578	99	-	.	ID=FBgn0001085.1.mrna1.exon1;Name=FBgn0001085.1;Parent=FBgn0001085.1.mrna1;Target=FBgn0001085.1 1 720 +
Chr1	stalkie_big_nohaplotig	exon	44802188	44802307	99	-	.	ID=FBgn0001085.1.mrna1.exon2;Name=FBgn0001085.1;Parent=FBgn0001085.1.mrna1;Target=FBgn0001085.1 721 840 +
Chr1	stalkie_big_nohaplotig	exon	44791122	44791316	100	-	.	ID=FBgn0001085.1.mrna1.exon3;Name=FBgn0001085.1;Parent=FBgn0001085.1.mrna1;Target=FBgn0001085.1 841 1035 +
Chr1	stalkie_big_nohaplotig	exon	44790775	44791000	99	-	.	ID=FBgn0001085.1.mrna1.exon4;Name=FBgn0001085.1;Parent=FBgn0001085.1.mrna1;Target=FBgn0001085.1 1036 1261 +
Chr1	stalkie_big_nohaplotig	CDS	44855859	44856578	99	-	0	ID=FBgn0001085.1.mrna1.cds1;Name=FBgn0001085.1;Parent=FBgn0001085.1.mrna1;Target=FBgn0001085.1 1 720 +
Chr1	stalkie_big_nohaplotig	CDS	44802188	44802307	99	-	0	ID=FBgn0001085.1.mrna1.cds2;Name=FBgn0001085.1;Parent=FBgn0001085.1.mrna1;Target=FBgn0001085.1 721 840 +
Chr1	stalkie_big_nohaplotig	CDS	44791122	44791316	100	-	0	ID=FBgn0001085.1.mrna1.cds3;Name=FBgn0001085.1;Parent=FBgn0001085.1.mrna1;Target=FBgn0001085.1 841 1035 +
Chr1	stalkie_big_nohaplotig	CDS	44790775	44791000	99	-	0	ID=FBgn0001085.1.mrna1.cds4;Name=FBgn0001085.1;Parent=FBgn0001085.1.mrna1;Target=FBgn0001085.1 1036 1261 +
Chr2	stalkie_big_nohaplotig	mRNA	6330721	6357190	.	+	.	ID=FBgn0003460.1.mrna1;Name=FBgn0003460.1;Parent=FBgn0003460.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1314;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	6330721	6331035	100	+	.	ID=FBgn0003460.1.mrna1.exon1;Name=FBgn0003460.1;Parent=FBgn0003460.1.mrna1;Target=FBgn0003460.1 1 315 +
Chr2	stalkie_big_nohaplotig	exon	6331157	6331367	100	+	.	ID=FBgn0003460.1.mrna1.exon2;Name=FBgn0003460.1;Parent=FBgn0003460.1.mrna1;Target=FBgn0003460.1 316 526 +
Chr2	stalkie_big_nohaplotig	exon	6331478	6331605	100	+	.	ID=FBgn0003460.1.mrna1.exon3;Name=FBgn0003460.1;Parent=FBgn0003460.1.mrna1;Target=FBgn0003460.1 527 654 +
Chr2	stalkie_big_nohaplotig	exon	6332295	6332399	100	+	.	ID=FBgn0003460.1.mrna1.exon4;Name=FBgn0003460.1;Parent=FBgn0003460.1.mrna1;Target=FBgn0003460.1 655 759 +
Chr2	stalkie_big_nohaplotig	exon	6335347	6335402	100	+	.	ID=FBgn0003460.1.mrna1.exon5;Name=FBgn0003460.1;Parent=FBgn0003460.1.mrna1;Target=FBgn0003460.1 760 815 +
Chr2	stalkie_big_nohaplotig	exon	6356692	6357190	100	+	.	ID=FBgn0003460.1.mrna1.exon6;Name=FBgn0003460.1;Parent=FBgn0003460.1.mrna1;Target=FBgn0003460.1 816 1314 +
Chr2	stalkie_big_nohaplotig	CDS	6330721	6331035	100	+	0	ID=FBgn0003460.1.mrna1.cds1;Name=FBgn0003460.1;Parent=FBgn0003460.1.mrna1;Target=FBgn0003460.1 1 315 +
Chr2	stalkie_big_nohaplotig	CDS	6331157	6331367	100	+	0	ID=FBgn0003460.1.mrna1.cds2;Name=FBgn0003460.1;Parent=FBgn0003460.1.mrna1;Target=FBgn0003460.1 316 526 +
Chr2	stalkie_big_nohaplotig	CDS	6331478	6331605	100	+	1	ID=FBgn0003460.1.mrna1.cds3;Name=FBgn0003460.1;Parent=FBgn0003460.1.mrna1;Target=FBgn0003460.1 527 654 +
Chr2	stalkie_big_nohaplotig	CDS	6332295	6332399	100	+	0	ID=FBgn0003460.1.mrna1.cds4;Name=FBgn0003460.1;Parent=FBgn0003460.1.mrna1;Target=FBgn0003460.1 655 759 +
Chr2	stalkie_big_nohaplotig	CDS	6335347	6335402	100	+	0	ID=FBgn0003460.1.mrna1.cds5;Name=FBgn0003460.1;Parent=FBgn0003460.1.mrna1;Target=FBgn0003460.1 760 815 +
Chr2	stalkie_big_nohaplotig	CDS	6356692	6357190	100	+	2	ID=FBgn0003460.1.mrna1.cds6;Name=FBgn0003460.1;Parent=FBgn0003460.1.mrna1;Target=FBgn0003460.1 816 1314 +
Chr2	stalkie_big_nohaplotig	mRNA	6362331	6365938	.	-	.	ID=FBgn0039680.2.mrna1;Name=FBgn0039680.2;Parent=FBgn0039680.2.path1;Dir=sensecoverage=100.0;identity=99.7;matches=2638;mismatches=6;indels=2;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	6365789	6365938	99	-	.	ID=FBgn0039680.2.mrna1.exon1;Name=FBgn0039680.2;Parent=FBgn0039680.2.mrna1;Target=FBgn0039680.2 1 151 +
Chr2	stalkie_big_nohaplotig	exon	6365326	6365464	100	-	.	ID=FBgn0039680.2.mrna1.exon2;Name=FBgn0039680.2;Parent=FBgn0039680.2.mrna1;Target=FBgn0039680.2 152 290 +
Chr2	stalkie_big_nohaplotig	exon	6365175	6365262	100	-	.	ID=FBgn0039680.2.mrna1.exon3;Name=FBgn0039680.2;Parent=FBgn0039680.2.mrna1;Target=FBgn0039680.2 291 378 +
Chr2	stalkie_big_nohaplotig	exon	6364713	6365008	100	-	.	ID=FBgn0039680.2.mrna1.exon4;Name=FBgn0039680.2;Parent=FBgn0039680.2.mrna1;Target=FBgn0039680.2 379 674 +
Chr2	stalkie_big_nohaplotig	exon	6363756	6364653	99	-	.	ID=FBgn0039680.2.mrna1.exon5;Name=FBgn0039680.2;Parent=FBgn0039680.2.mrna1;Target=FBgn0039680.2 675 1572 +
Chr2	stalkie_big_nohaplotig	exon	6362331	6363403	99	-	.	ID=FBgn0039680.2.mrna1.exon6;Name=FBgn0039680.2;Parent=FBgn0039680.2.mrna1;Target=FBgn0039680.2 1573 2646 +
Chr2	stalkie_big_nohaplotig	CDS	6365902	6365936	97	-	0	ID=FBgn0039680.2.mrna1.cds1;Name=FBgn0039680.2;Parent=FBgn0039680.2.mrna1;Target=FBgn0039680.2 3 38 +
Chr2	stalkie_big_nohaplotig	mRNA	93942024	93942776	.	+	.	ID=ORF3206.mrna1;Name=ORF3206;Parent=ORF3206.path1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=752;mismatches=1;indels=3;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	93942024	93942776	99	+	.	ID=ORF3206.mrna1.exon1;Name=ORF3206;Parent=ORF3206.mrna1;Target=ORF3206 756 1 .
Chr2	stalkie_big_nohaplotig	CDS	93942024	93942776	99	+	0	ID=ORF3206.mrna1.cds1;Name=ORF3206;Parent=ORF3206.mrna1;Target=ORF3206 756 1 .
Chr2	stalkie_big_nohaplotig	mRNA	56648073	56652027	.	-	.	ID=FBgn0034047.1.mrna1;Name=FBgn0034047.1;Parent=FBgn0034047.1.path1;Dir=sensecoverage=99.5;identity=99.5;matches=1125;mismatches=6;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	56651847	56652027	100	-	.	ID=FBgn0034047.1.mrna1.exon1;Name=FBgn0034047.1;Parent=FBgn0034047.1.mrna1;Target=FBgn0034047.1 7 187 +
Chr2	stalkie_big_nohaplotig	exon	56651048	56651784	99	-	.	ID=FBgn0034047.1.mrna1.exon2;Name=FBgn0034047.1;Parent=FBgn0034047.1.mrna1;Target=FBgn0034047.1 188 924 +
Chr2	stalkie_big_nohaplotig	exon	56648906	56649101	100	-	.	ID=FBgn0034047.1.mrna1.exon3;Name=FBgn0034047.1;Parent=FBgn0034047.1.mrna1;Target=FBgn0034047.1 925 1120 +
Chr2	stalkie_big_nohaplotig	exon	56648073	56648089	100	-	.	ID=FBgn0034047.1.mrna1.exon4;Name=FBgn0034047.1;Parent=FBgn0034047.1.mrna1;Target=FBgn0034047.1 1121 1137 +
Chr2	stalkie_big_nohaplotig	CDS	56651847	56652027	100	-	0	ID=FBgn0034047.1.mrna1.cds1;Name=FBgn0034047.1;Parent=FBgn0034047.1.mrna1;Target=FBgn0034047.1 7 187 +
Chr2	stalkie_big_nohaplotig	CDS	56651048	56651784	99	-	1	ID=FBgn0034047.1.mrna1.cds2;Name=FBgn0034047.1;Parent=FBgn0034047.1.mrna1;Target=FBgn0034047.1 188 924 +
Chr2	stalkie_big_nohaplotig	CDS	56648906	56649101	100	-	0	ID=FBgn0034047.1.mrna1.cds3;Name=FBgn0034047.1;Parent=FBgn0034047.1.mrna1;Target=FBgn0034047.1 925 1120 +
Chr2	stalkie_big_nohaplotig	CDS	56648073	56648089	100	-	1	ID=FBgn0034047.1.mrna1.cds4;Name=FBgn0034047.1;Parent=FBgn0034047.1.mrna1;Target=FBgn0034047.1 1121 1137 +
Chr2	stalkie_big_nohaplotig	mRNA	12327855	12366728	.	-	.	ID=FBgn0003090.1.mrna1;Name=FBgn0003090.1;Parent=FBgn0003090.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=3742;mismatches=14;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	12365920	12366728	99	-	.	ID=FBgn0003090.1.mrna1.exon1;Name=FBgn0003090.1;Parent=FBgn0003090.1.mrna1;Target=FBgn0003090.1 1 809 +
Chr2	stalkie_big_nohaplotig	exon	12338970	12339648	99	-	.	ID=FBgn0003090.1.mrna1.exon2;Name=FBgn0003090.1;Parent=FBgn0003090.1.mrna1;Target=FBgn0003090.1 810 1488 +
Chr2	stalkie_big_nohaplotig	exon	12332956	12333069	100	-	.	ID=FBgn0003090.1.mrna1.exon3;Name=FBgn0003090.1;Parent=FBgn0003090.1.mrna1;Target=FBgn0003090.1 1489 1602 +
Chr2	stalkie_big_nohaplotig	exon	12331727	12331855	100	-	.	ID=FBgn0003090.1.mrna1.exon4;Name=FBgn0003090.1;Parent=FBgn0003090.1.mrna1;Target=FBgn0003090.1 1603 1731 +
Chr2	stalkie_big_nohaplotig	exon	12330152	12330355	100	-	.	ID=FBgn0003090.1.mrna1.exon5;Name=FBgn0003090.1;Parent=FBgn0003090.1.mrna1;Target=FBgn0003090.1 1732 1935 +
Chr2	stalkie_big_nohaplotig	exon	12327855	12329675	99	-	.	ID=FBgn0003090.1.mrna1.exon6;Name=FBgn0003090.1;Parent=FBgn0003090.1.mrna1;Target=FBgn0003090.1 1936 3756 +
Chr2	stalkie_big_nohaplotig	CDS	12365920	12366728	99	-	0	ID=FBgn0003090.1.mrna1.cds1;Name=FBgn0003090.1;Parent=FBgn0003090.1.mrna1;Target=FBgn0003090.1 1 809 +
Chr2	stalkie_big_nohaplotig	CDS	12338970	12339648	99	-	2	ID=FBgn0003090.1.mrna1.cds2;Name=FBgn0003090.1;Parent=FBgn0003090.1.mrna1;Target=FBgn0003090.1 810 1488 +
Chr2	stalkie_big_nohaplotig	CDS	12332956	12333069	100	-	0	ID=FBgn0003090.1.mrna1.cds3;Name=FBgn0003090.1;Parent=FBgn0003090.1.mrna1;Target=FBgn0003090.1 1489 1602 +
Chr2	stalkie_big_nohaplotig	CDS	12331727	12331855	100	-	0	ID=FBgn0003090.1.mrna1.cds4;Name=FBgn0003090.1;Parent=FBgn0003090.1.mrna1;Target=FBgn0003090.1 1603 1731 +
Chr2	stalkie_big_nohaplotig	CDS	12330152	12330355	100	-	0	ID=FBgn0003090.1.mrna1.cds5;Name=FBgn0003090.1;Parent=FBgn0003090.1.mrna1;Target=FBgn0003090.1 1732 1935 +
Chr2	stalkie_big_nohaplotig	CDS	12327855	12329675	99	-	0	ID=FBgn0003090.1.mrna1.cds6;Name=FBgn0003090.1;Parent=FBgn0003090.1.mrna1;Target=FBgn0003090.1 1936 3756 +
Chr1	stalkie_big_nohaplotig	mRNA	38972310	38973431	.	+	.	ID=FBgn0004926.1.mrna1;Name=FBgn0004926.1;Parent=FBgn0004926.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=939;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	38972310	38972327	100	+	.	ID=FBgn0004926.1.mrna1.exon1;Name=FBgn0004926.1;Parent=FBgn0004926.1.mrna1;Target=FBgn0004926.1 1 18 +
Chr1	stalkie_big_nohaplotig	exon	38972451	38972850	100	+	.	ID=FBgn0004926.1.mrna1.exon2;Name=FBgn0004926.1;Parent=FBgn0004926.1.mrna1;Target=FBgn0004926.1 19 418 +
Chr1	stalkie_big_nohaplotig	exon	38972911	38973431	100	+	.	ID=FBgn0004926.1.mrna1.exon3;Name=FBgn0004926.1;Parent=FBgn0004926.1.mrna1;Target=FBgn0004926.1 419 939 +
Chr1	stalkie_big_nohaplotig	CDS	38972310	38972327	100	+	0	ID=FBgn0004926.1.mrna1.cds1;Name=FBgn0004926.1;Parent=FBgn0004926.1.mrna1;Target=FBgn0004926.1 1 18 +
Chr1	stalkie_big_nohaplotig	CDS	38972451	38972850	100	+	0	ID=FBgn0004926.1.mrna1.cds2;Name=FBgn0004926.1;Parent=FBgn0004926.1.mrna1;Target=FBgn0004926.1 19 418 +
Chr1	stalkie_big_nohaplotig	CDS	38972911	38973431	100	+	1	ID=FBgn0004926.1.mrna1.cds3;Name=FBgn0004926.1;Parent=FBgn0004926.1.mrna1;Target=FBgn0004926.1 419 939 +
ChrX	stalkie_big_nohaplotig	mRNA	686134	702750	.	+	.	ID=FBgn0011818.1.mrna1;Name=FBgn0011818.1;Parent=FBgn0011818.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=933;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	686134	686361	100	+	.	ID=FBgn0011818.1.mrna1.exon1;Name=FBgn0011818.1;Parent=FBgn0011818.1.mrna1;Target=FBgn0011818.1 1 228 +
ChrX	stalkie_big_nohaplotig	exon	697465	697578	100	+	.	ID=FBgn0011818.1.mrna1.exon2;Name=FBgn0011818.1;Parent=FBgn0011818.1.mrna1;Target=FBgn0011818.1 229 342 +
ChrX	stalkie_big_nohaplotig	exon	701562	701880	100	+	.	ID=FBgn0011818.1.mrna1.exon3;Name=FBgn0011818.1;Parent=FBgn0011818.1.mrna1;Target=FBgn0011818.1 343 661 +
ChrX	stalkie_big_nohaplotig	exon	702479	702750	100	+	.	ID=FBgn0011818.1.mrna1.exon4;Name=FBgn0011818.1;Parent=FBgn0011818.1.mrna1;Target=FBgn0011818.1 662 933 +
ChrX	stalkie_big_nohaplotig	CDS	686134	686361	100	+	0	ID=FBgn0011818.1.mrna1.cds1;Name=FBgn0011818.1;Parent=FBgn0011818.1.mrna1;Target=FBgn0011818.1 1 228 +
ChrX	stalkie_big_nohaplotig	CDS	697465	697578	100	+	0	ID=FBgn0011818.1.mrna1.cds2;Name=FBgn0011818.1;Parent=FBgn0011818.1.mrna1;Target=FBgn0011818.1 229 342 +
ChrX	stalkie_big_nohaplotig	CDS	701562	701880	100	+	0	ID=FBgn0011818.1.mrna1.cds3;Name=FBgn0011818.1;Parent=FBgn0011818.1.mrna1;Target=FBgn0011818.1 343 661 +
ChrX	stalkie_big_nohaplotig	CDS	702479	702750	100	+	1	ID=FBgn0011818.1.mrna1.cds4;Name=FBgn0011818.1;Parent=FBgn0011818.1.mrna1;Target=FBgn0011818.1 662 933 +
Chr2	stalkie_big_nohaplotig	mRNA	140905082	140906718	.	+	.	ID=FBgn0027889.1.mrna2;Name=FBgn0027889.1;Parent=FBgn0027889.1.path2;Dir=sensecoverage=94.6;identity=96.5;matches=1527;mismatches=56;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	140905082	140905657	90	+	.	ID=FBgn0027889.1.mrna2.exon1;Name=FBgn0027889.1;Parent=FBgn0027889.1.mrna2;Target=FBgn0027889.1 92 667 +
Chr2	stalkie_big_nohaplotig	exon	140905712	140906718	99	+	.	ID=FBgn0027889.1.mrna2.exon2;Name=FBgn0027889.1;Parent=FBgn0027889.1.mrna2;Target=FBgn0027889.1 668 1674 +
Chr2	stalkie_big_nohaplotig	CDS	140905082	140905657	90	+	1	ID=FBgn0027889.1.mrna2.cds1;Name=FBgn0027889.1;Parent=FBgn0027889.1.mrna2;Target=FBgn0027889.1 92 667 +
Chr2	stalkie_big_nohaplotig	CDS	140905712	140906718	99	+	1	ID=FBgn0027889.1.mrna2.cds2;Name=FBgn0027889.1;Parent=FBgn0027889.1.mrna2;Target=FBgn0027889.1 668 1674 +
Chr2	stalkie_big_nohaplotig	mRNA	140907157	140908110	.	-	.	ID=FBgn0039459.1.mrna1;Name=FBgn0039459.1;Parent=FBgn0039459.1.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=954;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	140907157	140908110	100	-	.	ID=FBgn0039459.1.mrna1.exon1;Name=FBgn0039459.1;Parent=FBgn0039459.1.mrna1;Target=FBgn0039459.1 954 1 .
Chr2	stalkie_big_nohaplotig	CDS	140907157	140908110	100	-	0	ID=FBgn0039459.1.mrna1.cds1;Name=FBgn0039459.1;Parent=FBgn0039459.1.mrna1;Target=FBgn0039459.1 954 1 .
Chr2	stalkie_big_nohaplotig	mRNA	126831744	126834074	.	+	.	ID=FBgn0034933.1.mrna1;Name=FBgn0034933.1;Parent=FBgn0034933.1.path1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=2324;mismatches=7;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	126831744	126834074	99	+	.	ID=FBgn0034933.1.mrna1.exon1;Name=FBgn0034933.1;Parent=FBgn0034933.1.mrna1;Target=FBgn0034933.1 2331 1 .
Chr2	stalkie_big_nohaplotig	CDS	126831744	126834074	99	+	0	ID=FBgn0034933.1.mrna1.cds1;Name=FBgn0034933.1;Parent=FBgn0034933.1.mrna1;Target=FBgn0034933.1 2331 1 .
Chr1	stalkie_big_nohaplotig	mRNA	53039891	53046347	.	-	.	ID=FBgn0036479.1.mrna1;Name=FBgn0036479.1;Parent=FBgn0036479.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1563;mismatches=6;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	53046161	53046347	100	-	.	ID=FBgn0036479.1.mrna1.exon1;Name=FBgn0036479.1;Parent=FBgn0036479.1.mrna1;Target=FBgn0036479.1 1 187 +
Chr1	stalkie_big_nohaplotig	exon	53042841	53042992	100	-	.	ID=FBgn0036479.1.mrna1.exon2;Name=FBgn0036479.1;Parent=FBgn0036479.1.mrna1;Target=FBgn0036479.1 188 339 +
Chr1	stalkie_big_nohaplotig	exon	53042575	53042719	100	-	.	ID=FBgn0036479.1.mrna1.exon3;Name=FBgn0036479.1;Parent=FBgn0036479.1.mrna1;Target=FBgn0036479.1 340 484 +
Chr1	stalkie_big_nohaplotig	exon	53042092	53042300	98	-	.	ID=FBgn0036479.1.mrna1.exon4;Name=FBgn0036479.1;Parent=FBgn0036479.1.mrna1;Target=FBgn0036479.1 485 693 +
Chr1	stalkie_big_nohaplotig	exon	53040916	53041114	99	-	.	ID=FBgn0036479.1.mrna1.exon5;Name=FBgn0036479.1;Parent=FBgn0036479.1.mrna1;Target=FBgn0036479.1 694 892 +
Chr1	stalkie_big_nohaplotig	exon	53040724	53040849	100	-	.	ID=FBgn0036479.1.mrna1.exon6;Name=FBgn0036479.1;Parent=FBgn0036479.1.mrna1;Target=FBgn0036479.1 893 1018 +
Chr1	stalkie_big_nohaplotig	exon	53040517	53040667	100	-	.	ID=FBgn0036479.1.mrna1.exon7;Name=FBgn0036479.1;Parent=FBgn0036479.1.mrna1;Target=FBgn0036479.1 1019 1169 +
Chr1	stalkie_big_nohaplotig	exon	53040342	53040448	100	-	.	ID=FBgn0036479.1.mrna1.exon8;Name=FBgn0036479.1;Parent=FBgn0036479.1.mrna1;Target=FBgn0036479.1 1170 1276 +
Chr1	stalkie_big_nohaplotig	exon	53039891	53040183	99	-	.	ID=FBgn0036479.1.mrna1.exon9;Name=FBgn0036479.1;Parent=FBgn0036479.1.mrna1;Target=FBgn0036479.1 1277 1569 +
Chr1	stalkie_big_nohaplotig	CDS	53046161	53046347	100	-	0	ID=FBgn0036479.1.mrna1.cds1;Name=FBgn0036479.1;Parent=FBgn0036479.1.mrna1;Target=FBgn0036479.1 1 187 +
Chr1	stalkie_big_nohaplotig	CDS	53042841	53042992	100	-	1	ID=FBgn0036479.1.mrna1.cds2;Name=FBgn0036479.1;Parent=FBgn0036479.1.mrna1;Target=FBgn0036479.1 188 339 +
Chr1	stalkie_big_nohaplotig	CDS	53042575	53042719	100	-	0	ID=FBgn0036479.1.mrna1.cds3;Name=FBgn0036479.1;Parent=FBgn0036479.1.mrna1;Target=FBgn0036479.1 340 484 +
Chr1	stalkie_big_nohaplotig	CDS	53042092	53042300	98	-	1	ID=FBgn0036479.1.mrna1.cds4;Name=FBgn0036479.1;Parent=FBgn0036479.1.mrna1;Target=FBgn0036479.1 485 693 +
Chr1	stalkie_big_nohaplotig	CDS	53040916	53041114	99	-	0	ID=FBgn0036479.1.mrna1.cds5;Name=FBgn0036479.1;Parent=FBgn0036479.1.mrna1;Target=FBgn0036479.1 694 892 +
Chr1	stalkie_big_nohaplotig	CDS	53040724	53040849	100	-	1	ID=FBgn0036479.1.mrna1.cds6;Name=FBgn0036479.1;Parent=FBgn0036479.1.mrna1;Target=FBgn0036479.1 893 1018 +
Chr1	stalkie_big_nohaplotig	CDS	53040517	53040667	100	-	1	ID=FBgn0036479.1.mrna1.cds7;Name=FBgn0036479.1;Parent=FBgn0036479.1.mrna1;Target=FBgn0036479.1 1019 1169 +
Chr1	stalkie_big_nohaplotig	CDS	53040342	53040448	100	-	2	ID=FBgn0036479.1.mrna1.cds8;Name=FBgn0036479.1;Parent=FBgn0036479.1.mrna1;Target=FBgn0036479.1 1170 1276 +
Chr1	stalkie_big_nohaplotig	CDS	53039891	53040183	99	-	1	ID=FBgn0036479.1.mrna1.cds9;Name=FBgn0036479.1;Parent=FBgn0036479.1.mrna1;Target=FBgn0036479.1 1277 1569 +
Chr1	stalkie_big_nohaplotig	mRNA	113537383	113539008	.	-	.	ID=FBgn0032244.1.mrna1;Name=FBgn0032244.1;Parent=FBgn0032244.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=1006;mismatches=7;indels=0;unknowns=4
Chr1	stalkie_big_nohaplotig	exon	113538950	113539008	100	-	.	ID=FBgn0032244.1.mrna1.exon1;Name=FBgn0032244.1;Parent=FBgn0032244.1.mrna1;Target=FBgn0032244.1 1 59 +
Chr1	stalkie_big_nohaplotig	exon	113538822	113538886	98	-	.	ID=FBgn0032244.1.mrna1.exon2;Name=FBgn0032244.1;Parent=FBgn0032244.1.mrna1;Target=FBgn0032244.1 60 124 +
Chr1	stalkie_big_nohaplotig	exon	113538301	113538751	99	-	.	ID=FBgn0032244.1.mrna1.exon3;Name=FBgn0032244.1;Parent=FBgn0032244.1.mrna1;Target=FBgn0032244.1 125 575 +
Chr1	stalkie_big_nohaplotig	exon	113538033	113538247	99	-	.	ID=FBgn0032244.1.mrna1.exon4;Name=FBgn0032244.1;Parent=FBgn0032244.1.mrna1;Target=FBgn0032244.1 576 790 +
Chr1	stalkie_big_nohaplotig	exon	113537886	113537963	98	-	.	ID=FBgn0032244.1.mrna1.exon5;Name=FBgn0032244.1;Parent=FBgn0032244.1.mrna1;Target=FBgn0032244.1 791 868 +
Chr1	stalkie_big_nohaplotig	exon	113537383	113537531	100	-	.	ID=FBgn0032244.1.mrna1.exon6;Name=FBgn0032244.1;Parent=FBgn0032244.1.mrna1;Target=FBgn0032244.1 869 1017 +
Chr1	stalkie_big_nohaplotig	CDS	113538950	113539008	100	-	0	ID=FBgn0032244.1.mrna1.cds1;Name=FBgn0032244.1;Parent=FBgn0032244.1.mrna1;Target=FBgn0032244.1 1 59 +
Chr1	stalkie_big_nohaplotig	CDS	113538822	113538886	98	-	2	ID=FBgn0032244.1.mrna1.cds2;Name=FBgn0032244.1;Parent=FBgn0032244.1.mrna1;Target=FBgn0032244.1 60 124 +
Chr1	stalkie_big_nohaplotig	CDS	113538301	113538751	99	-	1	ID=FBgn0032244.1.mrna1.cds3;Name=FBgn0032244.1;Parent=FBgn0032244.1.mrna1;Target=FBgn0032244.1 125 575 +
Chr1	stalkie_big_nohaplotig	CDS	113538033	113538247	99	-	2	ID=FBgn0032244.1.mrna1.cds4;Name=FBgn0032244.1;Parent=FBgn0032244.1.mrna1;Target=FBgn0032244.1 576 790 +
Chr1	stalkie_big_nohaplotig	CDS	113537886	113537963	98	-	1	ID=FBgn0032244.1.mrna1.cds5;Name=FBgn0032244.1;Parent=FBgn0032244.1.mrna1;Target=FBgn0032244.1 791 868 +
Chr1	stalkie_big_nohaplotig	CDS	113537383	113537531	100	-	1	ID=FBgn0032244.1.mrna1.cds6;Name=FBgn0032244.1;Parent=FBgn0032244.1.mrna1;Target=FBgn0032244.1 869 1017 +
Chr2	stalkie_big_nohaplotig	mRNA	107171997	107173280	.	-	.	ID=FBgn0010389.mrna1;Name=FBgn0010389;Parent=FBgn0010389.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1284;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	107171997	107173280	100	-	.	ID=FBgn0010389.mrna1.exon1;Name=FBgn0010389;Parent=FBgn0010389.mrna1;Target=FBgn0010389 1284 1 .
Chr2	stalkie_big_nohaplotig	CDS	107171997	107173280	100	-	0	ID=FBgn0010389.mrna1.cds1;Name=FBgn0010389;Parent=FBgn0010389.mrna1;Target=FBgn0010389 1284 1 .
Chr2	stalkie_big_nohaplotig	mRNA	129081386	129133254	.	-	.	ID=FBgn0261550.1.mrna1;Name=FBgn0261550.1;Parent=FBgn0261550.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2832;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	129132861	129133254	100	-	.	ID=FBgn0261550.1.mrna1.exon1;Name=FBgn0261550.1;Parent=FBgn0261550.1.mrna1;Target=FBgn0261550.1 1 394 +
Chr2	stalkie_big_nohaplotig	exon	129102916	129102974	100	-	.	ID=FBgn0261550.1.mrna1.exon2;Name=FBgn0261550.1;Parent=FBgn0261550.1.mrna1;Target=FBgn0261550.1 395 453 +
Chr2	stalkie_big_nohaplotig	exon	129094164	129094310	100	-	.	ID=FBgn0261550.1.mrna1.exon3;Name=FBgn0261550.1;Parent=FBgn0261550.1.mrna1;Target=FBgn0261550.1 454 600 +
Chr2	stalkie_big_nohaplotig	exon	129088169	129088400	100	-	.	ID=FBgn0261550.1.mrna1.exon4;Name=FBgn0261550.1;Parent=FBgn0261550.1.mrna1;Target=FBgn0261550.1 601 832 +
Chr2	stalkie_big_nohaplotig	exon	129087880	129088113	100	-	.	ID=FBgn0261550.1.mrna1.exon5;Name=FBgn0261550.1;Parent=FBgn0261550.1.mrna1;Target=FBgn0261550.1 833 1066 +
Chr2	stalkie_big_nohaplotig	exon	129084222	129084385	100	-	.	ID=FBgn0261550.1.mrna1.exon6;Name=FBgn0261550.1;Parent=FBgn0261550.1.mrna1;Target=FBgn0261550.1 1067 1230 +
Chr2	stalkie_big_nohaplotig	exon	129083979	129084160	100	-	.	ID=FBgn0261550.1.mrna1.exon7;Name=FBgn0261550.1;Parent=FBgn0261550.1.mrna1;Target=FBgn0261550.1 1231 1412 +
Chr2	stalkie_big_nohaplotig	exon	129083049	129083913	100	-	.	ID=FBgn0261550.1.mrna1.exon8;Name=FBgn0261550.1;Parent=FBgn0261550.1.mrna1;Target=FBgn0261550.1 1413 2277 +
Chr2	stalkie_big_nohaplotig	exon	129081734	129082029	100	-	.	ID=FBgn0261550.1.mrna1.exon9;Name=FBgn0261550.1;Parent=FBgn0261550.1.mrna1;Target=FBgn0261550.1 2278 2573 +
Chr2	stalkie_big_nohaplotig	exon	129081386	129081644	100	-	.	ID=FBgn0261550.1.mrna1.exon10;Name=FBgn0261550.1;Parent=FBgn0261550.1.mrna1;Target=FBgn0261550.1 2574 2832 +
Chr2	stalkie_big_nohaplotig	CDS	129132861	129133254	100	-	0	ID=FBgn0261550.1.mrna1.cds1;Name=FBgn0261550.1;Parent=FBgn0261550.1.mrna1;Target=FBgn0261550.1 1 394 +
Chr2	stalkie_big_nohaplotig	CDS	129102916	129102974	100	-	1	ID=FBgn0261550.1.mrna1.cds2;Name=FBgn0261550.1;Parent=FBgn0261550.1.mrna1;Target=FBgn0261550.1 395 453 +
Chr2	stalkie_big_nohaplotig	CDS	129094164	129094310	100	-	0	ID=FBgn0261550.1.mrna1.cds3;Name=FBgn0261550.1;Parent=FBgn0261550.1.mrna1;Target=FBgn0261550.1 454 600 +
Chr2	stalkie_big_nohaplotig	CDS	129088169	129088400	100	-	0	ID=FBgn0261550.1.mrna1.cds4;Name=FBgn0261550.1;Parent=FBgn0261550.1.mrna1;Target=FBgn0261550.1 601 832 +
Chr2	stalkie_big_nohaplotig	CDS	129087880	129088113	100	-	1	ID=FBgn0261550.1.mrna1.cds5;Name=FBgn0261550.1;Parent=FBgn0261550.1.mrna1;Target=FBgn0261550.1 833 1066 +
Chr2	stalkie_big_nohaplotig	CDS	129084222	129084385	100	-	1	ID=FBgn0261550.1.mrna1.cds6;Name=FBgn0261550.1;Parent=FBgn0261550.1.mrna1;Target=FBgn0261550.1 1067 1230 +
Chr2	stalkie_big_nohaplotig	CDS	129083979	129084160	100	-	0	ID=FBgn0261550.1.mrna1.cds7;Name=FBgn0261550.1;Parent=FBgn0261550.1.mrna1;Target=FBgn0261550.1 1231 1412 +
Chr2	stalkie_big_nohaplotig	CDS	129083049	129083913	100	-	2	ID=FBgn0261550.1.mrna1.cds8;Name=FBgn0261550.1;Parent=FBgn0261550.1.mrna1;Target=FBgn0261550.1 1413 2277 +
Chr2	stalkie_big_nohaplotig	CDS	129081734	129082029	100	-	0	ID=FBgn0261550.1.mrna1.cds9;Name=FBgn0261550.1;Parent=FBgn0261550.1.mrna1;Target=FBgn0261550.1 2278 2573 +
Chr2	stalkie_big_nohaplotig	CDS	129081386	129081644	100	-	2	ID=FBgn0261550.1.mrna1.cds10;Name=FBgn0261550.1;Parent=FBgn0261550.1.mrna1;Target=FBgn0261550.1 2574 2832 +
Chr2	stalkie_big_nohaplotig	mRNA	60890243	60894206	.	-	.	ID=FBgn0050271.1.mrna1;Name=FBgn0050271.1;Parent=FBgn0050271.1.path1;Dir=sensecoverage=100.0;identity=99.1;matches=1754;mismatches=10;indels=6;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	60894156	60894206	98	-	.	ID=FBgn0050271.1.mrna1.exon1;Name=FBgn0050271.1;Parent=FBgn0050271.1.mrna1;Target=FBgn0050271.1 1 51 +
Chr2	stalkie_big_nohaplotig	exon	60893775	60894086	100	-	.	ID=FBgn0050271.1.mrna1.exon2;Name=FBgn0050271.1;Parent=FBgn0050271.1.mrna1;Target=FBgn0050271.1 52 363 +
Chr2	stalkie_big_nohaplotig	exon	60893568	60893711	100	-	.	ID=FBgn0050271.1.mrna1.exon3;Name=FBgn0050271.1;Parent=FBgn0050271.1.mrna1;Target=FBgn0050271.1 364 507 +
Chr2	stalkie_big_nohaplotig	exon	60893396	60893487	100	-	.	ID=FBgn0050271.1.mrna1.exon4;Name=FBgn0050271.1;Parent=FBgn0050271.1.mrna1;Target=FBgn0050271.1 508 599 +
Chr2	stalkie_big_nohaplotig	exon	60891791	60891968	100	-	.	ID=FBgn0050271.1.mrna1.exon5;Name=FBgn0050271.1;Parent=FBgn0050271.1.mrna1;Target=FBgn0050271.1 600 777 +
Chr2	stalkie_big_nohaplotig	exon	60890243	60891229	98	-	.	ID=FBgn0050271.1.mrna1.exon6;Name=FBgn0050271.1;Parent=FBgn0050271.1.mrna1;Target=FBgn0050271.1 778 1770 +
Chr2	stalkie_big_nohaplotig	CDS	60894156	60894206	98	-	0	ID=FBgn0050271.1.mrna1.cds1;Name=FBgn0050271.1;Parent=FBgn0050271.1.mrna1;Target=FBgn0050271.1 1 51 +
Chr2	stalkie_big_nohaplotig	CDS	60893775	60894086	100	-	0	ID=FBgn0050271.1.mrna1.cds2;Name=FBgn0050271.1;Parent=FBgn0050271.1.mrna1;Target=FBgn0050271.1 52 363 +
Chr2	stalkie_big_nohaplotig	CDS	60893568	60893711	100	-	0	ID=FBgn0050271.1.mrna1.cds3;Name=FBgn0050271.1;Parent=FBgn0050271.1.mrna1;Target=FBgn0050271.1 364 507 +
Chr2	stalkie_big_nohaplotig	CDS	60893396	60893487	100	-	0	ID=FBgn0050271.1.mrna1.cds4;Name=FBgn0050271.1;Parent=FBgn0050271.1.mrna1;Target=FBgn0050271.1 508 599 +
Chr2	stalkie_big_nohaplotig	CDS	60891791	60891968	100	-	2	ID=FBgn0050271.1.mrna1.cds5;Name=FBgn0050271.1;Parent=FBgn0050271.1.mrna1;Target=FBgn0050271.1 600 777 +
Chr2	stalkie_big_nohaplotig	CDS	60890243	60891229	98	-	0	ID=FBgn0050271.1.mrna1.cds6;Name=FBgn0050271.1;Parent=FBgn0050271.1.mrna1;Target=FBgn0050271.1 778 1770 +
ChrX	stalkie_big_nohaplotig	mRNA	48187969	48204140	.	+	.	ID=FBgn0262029.1.mrna1;Name=FBgn0262029.1;Parent=FBgn0262029.1.path1;Dir=sensecoverage=97.7;identity=100.0;matches=4088;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	48187969	48188465	100	+	.	ID=FBgn0262029.1.mrna1.exon1;Name=FBgn0262029.1;Parent=FBgn0262029.1.mrna1;Target=FBgn0262029.1 98 594 +
ChrX	stalkie_big_nohaplotig	exon	48188552	48188669	100	+	.	ID=FBgn0262029.1.mrna1.exon2;Name=FBgn0262029.1;Parent=FBgn0262029.1.mrna1;Target=FBgn0262029.1 595 712 +
ChrX	stalkie_big_nohaplotig	exon	48188790	48189265	100	+	.	ID=FBgn0262029.1.mrna1.exon3;Name=FBgn0262029.1;Parent=FBgn0262029.1.mrna1;Target=FBgn0262029.1 713 1188 +
ChrX	stalkie_big_nohaplotig	exon	48193291	48193998	100	+	.	ID=FBgn0262029.1.mrna1.exon4;Name=FBgn0262029.1;Parent=FBgn0262029.1.mrna1;Target=FBgn0262029.1 1189 1896 +
ChrX	stalkie_big_nohaplotig	exon	48198165	48199773	100	+	.	ID=FBgn0262029.1.mrna1.exon5;Name=FBgn0262029.1;Parent=FBgn0262029.1.mrna1;Target=FBgn0262029.1 1897 3505 +
ChrX	stalkie_big_nohaplotig	exon	48200302	48200450	100	+	.	ID=FBgn0262029.1.mrna1.exon6;Name=FBgn0262029.1;Parent=FBgn0262029.1.mrna1;Target=FBgn0262029.1 3506 3654 +
ChrX	stalkie_big_nohaplotig	exon	48203610	48204140	100	+	.	ID=FBgn0262029.1.mrna1.exon7;Name=FBgn0262029.1;Parent=FBgn0262029.1.mrna1;Target=FBgn0262029.1 3655 4185 +
ChrX	stalkie_big_nohaplotig	CDS	48187971	48188465	100	+	0	ID=FBgn0262029.1.mrna1.cds1;Name=FBgn0262029.1;Parent=FBgn0262029.1.mrna1;Target=FBgn0262029.1 100 594 +
ChrX	stalkie_big_nohaplotig	CDS	48188552	48188669	100	+	0	ID=FBgn0262029.1.mrna1.cds2;Name=FBgn0262029.1;Parent=FBgn0262029.1.mrna1;Target=FBgn0262029.1 595 712 +
ChrX	stalkie_big_nohaplotig	CDS	48188790	48189265	100	+	1	ID=FBgn0262029.1.mrna1.cds3;Name=FBgn0262029.1;Parent=FBgn0262029.1.mrna1;Target=FBgn0262029.1 713 1188 +
ChrX	stalkie_big_nohaplotig	CDS	48193291	48193998	100	+	0	ID=FBgn0262029.1.mrna1.cds4;Name=FBgn0262029.1;Parent=FBgn0262029.1.mrna1;Target=FBgn0262029.1 1189 1896 +
ChrX	stalkie_big_nohaplotig	CDS	48198165	48199773	100	+	0	ID=FBgn0262029.1.mrna1.cds5;Name=FBgn0262029.1;Parent=FBgn0262029.1.mrna1;Target=FBgn0262029.1 1897 3505 +
ChrX	stalkie_big_nohaplotig	CDS	48200302	48200450	100	+	1	ID=FBgn0262029.1.mrna1.cds6;Name=FBgn0262029.1;Parent=FBgn0262029.1.mrna1;Target=FBgn0262029.1 3506 3654 +
ChrX	stalkie_big_nohaplotig	CDS	48203610	48204140	100	+	0	ID=FBgn0262029.1.mrna1.cds7;Name=FBgn0262029.1;Parent=FBgn0262029.1.mrna1;Target=FBgn0262029.1 3655 4185 +
Chr2	stalkie_big_nohaplotig	mRNA	60870731	60874732	.	-	.	ID=FBgn0259179.mrna1;Name=FBgn0259179;Parent=FBgn0259179.path1;Dir=sensecoverage=100.0;identity=99.0;matches=1135;mismatches=11;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	60874699	60874732	100	-	.	ID=FBgn0259179.mrna1.exon1;Name=FBgn0259179;Parent=FBgn0259179.mrna1;Target=FBgn0259179 1 34 +
Chr2	stalkie_big_nohaplotig	exon	60873330	60873401	100	-	.	ID=FBgn0259179.mrna1.exon2;Name=FBgn0259179;Parent=FBgn0259179.mrna1;Target=FBgn0259179 35 106 +
Chr2	stalkie_big_nohaplotig	exon	60871547	60872044	98	-	.	ID=FBgn0259179.mrna1.exon3;Name=FBgn0259179;Parent=FBgn0259179.mrna1;Target=FBgn0259179 107 604 +
Chr2	stalkie_big_nohaplotig	exon	60871320	60871471	97	-	.	ID=FBgn0259179.mrna1.exon4;Name=FBgn0259179;Parent=FBgn0259179.mrna1;Target=FBgn0259179 605 756 +
Chr2	stalkie_big_nohaplotig	exon	60871144	60871255	100	-	.	ID=FBgn0259179.mrna1.exon5;Name=FBgn0259179;Parent=FBgn0259179.mrna1;Target=FBgn0259179 757 868 +
Chr2	stalkie_big_nohaplotig	exon	60870987	60871084	100	-	.	ID=FBgn0259179.mrna1.exon6;Name=FBgn0259179;Parent=FBgn0259179.mrna1;Target=FBgn0259179 869 966 +
Chr2	stalkie_big_nohaplotig	exon	60870731	60870910	100	-	.	ID=FBgn0259179.mrna1.exon7;Name=FBgn0259179;Parent=FBgn0259179.mrna1;Target=FBgn0259179 967 1146 +
Chr2	stalkie_big_nohaplotig	CDS	60874699	60874732	100	-	0	ID=FBgn0259179.mrna1.cds1;Name=FBgn0259179;Parent=FBgn0259179.mrna1;Target=FBgn0259179 1 34 +
Chr2	stalkie_big_nohaplotig	CDS	60873330	60873401	100	-	1	ID=FBgn0259179.mrna1.cds2;Name=FBgn0259179;Parent=FBgn0259179.mrna1;Target=FBgn0259179 35 106 +
Chr2	stalkie_big_nohaplotig	CDS	60871547	60872044	98	-	1	ID=FBgn0259179.mrna1.cds3;Name=FBgn0259179;Parent=FBgn0259179.mrna1;Target=FBgn0259179 107 604 +
Chr2	stalkie_big_nohaplotig	CDS	60871320	60871471	97	-	1	ID=FBgn0259179.mrna1.cds4;Name=FBgn0259179;Parent=FBgn0259179.mrna1;Target=FBgn0259179 605 756 +
Chr2	stalkie_big_nohaplotig	CDS	60871144	60871255	100	-	0	ID=FBgn0259179.mrna1.cds5;Name=FBgn0259179;Parent=FBgn0259179.mrna1;Target=FBgn0259179 757 868 +
Chr2	stalkie_big_nohaplotig	CDS	60870987	60871084	100	-	1	ID=FBgn0259179.mrna1.cds6;Name=FBgn0259179;Parent=FBgn0259179.mrna1;Target=FBgn0259179 869 966 +
Chr2	stalkie_big_nohaplotig	CDS	60870731	60870910	100	-	0	ID=FBgn0259179.mrna1.cds7;Name=FBgn0259179;Parent=FBgn0259179.mrna1;Target=FBgn0259179 967 1146 +
Chr1	stalkie_big_nohaplotig	mRNA	114403856	114404971	.	-	.	ID=FBgn0027108.1.mrna1;Name=FBgn0027108.1;Parent=FBgn0027108.1.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1115;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	114403856	114404971	99	-	.	ID=FBgn0027108.1.mrna1.exon1;Name=FBgn0027108.1;Parent=FBgn0027108.1.mrna1;Target=FBgn0027108.1 1116 1 .
Chr1	stalkie_big_nohaplotig	CDS	114403856	114404971	99	-	0	ID=FBgn0027108.1.mrna1.cds1;Name=FBgn0027108.1;Parent=FBgn0027108.1.mrna1;Target=FBgn0027108.1 1116 1 .
Chr2	stalkie_big_nohaplotig	mRNA	41652362	41662193	.	+	.	ID=FBgn0026369.1.mrna1;Name=FBgn0026369.1;Parent=FBgn0026369.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=4202;mismatches=22;indels=6;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	41652362	41652407	100	+	.	ID=FBgn0026369.1.mrna1.exon1;Name=FBgn0026369.1;Parent=FBgn0026369.1.mrna1;Target=FBgn0026369.1 1 46 +
Chr2	stalkie_big_nohaplotig	exon	41652468	41653402	98	+	.	ID=FBgn0026369.1.mrna1.exon2;Name=FBgn0026369.1;Parent=FBgn0026369.1.mrna1;Target=FBgn0026369.1 47 987 +
Chr2	stalkie_big_nohaplotig	exon	41653468	41654146	99	+	.	ID=FBgn0026369.1.mrna1.exon3;Name=FBgn0026369.1;Parent=FBgn0026369.1.mrna1;Target=FBgn0026369.1 988 1666 +
Chr2	stalkie_big_nohaplotig	exon	41655691	41656506	99	+	.	ID=FBgn0026369.1.mrna1.exon4;Name=FBgn0026369.1;Parent=FBgn0026369.1.mrna1;Target=FBgn0026369.1 1667 2482 +
Chr2	stalkie_big_nohaplotig	exon	41656562	41656843	99	+	.	ID=FBgn0026369.1.mrna1.exon5;Name=FBgn0026369.1;Parent=FBgn0026369.1.mrna1;Target=FBgn0026369.1 2483 2764 +
Chr2	stalkie_big_nohaplotig	exon	41657493	41657989	99	+	.	ID=FBgn0026369.1.mrna1.exon6;Name=FBgn0026369.1;Parent=FBgn0026369.1.mrna1;Target=FBgn0026369.1 2765 3261 +
Chr2	stalkie_big_nohaplotig	exon	41658052	41658325	100	+	.	ID=FBgn0026369.1.mrna1.exon7;Name=FBgn0026369.1;Parent=FBgn0026369.1.mrna1;Target=FBgn0026369.1 3262 3535 +
Chr2	stalkie_big_nohaplotig	exon	41660470	41660716	99	+	.	ID=FBgn0026369.1.mrna1.exon8;Name=FBgn0026369.1;Parent=FBgn0026369.1.mrna1;Target=FBgn0026369.1 3536 3782 +
Chr2	stalkie_big_nohaplotig	exon	41660782	41660902	100	+	.	ID=FBgn0026369.1.mrna1.exon9;Name=FBgn0026369.1;Parent=FBgn0026369.1.mrna1;Target=FBgn0026369.1 3783 3903 +
Chr2	stalkie_big_nohaplotig	exon	41661807	41661983	100	+	.	ID=FBgn0026369.1.mrna1.exon10;Name=FBgn0026369.1;Parent=FBgn0026369.1.mrna1;Target=FBgn0026369.1 3904 4080 +
Chr2	stalkie_big_nohaplotig	exon	41662044	41662193	99	+	.	ID=FBgn0026369.1.mrna1.exon11;Name=FBgn0026369.1;Parent=FBgn0026369.1.mrna1;Target=FBgn0026369.1 4081 4230 +
Chr2	stalkie_big_nohaplotig	CDS	41652362	41652407	100	+	0	ID=FBgn0026369.1.mrna1.cds1;Name=FBgn0026369.1;Parent=FBgn0026369.1.mrna1;Target=FBgn0026369.1 1 46 +
Chr2	stalkie_big_nohaplotig	CDS	41652468	41653402	98	+	1	ID=FBgn0026369.1.mrna1.cds2;Name=FBgn0026369.1;Parent=FBgn0026369.1.mrna1;Target=FBgn0026369.1 47 987 +
Chr2	stalkie_big_nohaplotig	CDS	41653468	41654146	99	+	0	ID=FBgn0026369.1.mrna1.cds3;Name=FBgn0026369.1;Parent=FBgn0026369.1.mrna1;Target=FBgn0026369.1 988 1666 +
Chr2	stalkie_big_nohaplotig	CDS	41655691	41656506	99	+	1	ID=FBgn0026369.1.mrna1.cds4;Name=FBgn0026369.1;Parent=FBgn0026369.1.mrna1;Target=FBgn0026369.1 1667 2482 +
Chr2	stalkie_big_nohaplotig	CDS	41656562	41656843	99	+	1	ID=FBgn0026369.1.mrna1.cds5;Name=FBgn0026369.1;Parent=FBgn0026369.1.mrna1;Target=FBgn0026369.1 2483 2764 +
Chr2	stalkie_big_nohaplotig	CDS	41657493	41657989	99	+	1	ID=FBgn0026369.1.mrna1.cds6;Name=FBgn0026369.1;Parent=FBgn0026369.1.mrna1;Target=FBgn0026369.1 2765 3261 +
Chr2	stalkie_big_nohaplotig	CDS	41658052	41658325	100	+	0	ID=FBgn0026369.1.mrna1.cds7;Name=FBgn0026369.1;Parent=FBgn0026369.1.mrna1;Target=FBgn0026369.1 3262 3535 +
Chr2	stalkie_big_nohaplotig	CDS	41660470	41660716	99	+	1	ID=FBgn0026369.1.mrna1.cds8;Name=FBgn0026369.1;Parent=FBgn0026369.1.mrna1;Target=FBgn0026369.1 3536 3782 +
Chr2	stalkie_big_nohaplotig	CDS	41660782	41660902	100	+	2	ID=FBgn0026369.1.mrna1.cds9;Name=FBgn0026369.1;Parent=FBgn0026369.1.mrna1;Target=FBgn0026369.1 3783 3903 +
Chr2	stalkie_big_nohaplotig	CDS	41661807	41661983	100	+	0	ID=FBgn0026369.1.mrna1.cds10;Name=FBgn0026369.1;Parent=FBgn0026369.1.mrna1;Target=FBgn0026369.1 3904 4080 +
Chr2	stalkie_big_nohaplotig	CDS	41662044	41662193	99	+	0	ID=FBgn0026369.1.mrna1.cds11;Name=FBgn0026369.1;Parent=FBgn0026369.1.mrna1;Target=FBgn0026369.1 4081 4230 +
Chr2	stalkie_big_nohaplotig	mRNA	44822751	44824323	.	-	.	ID=ORF703.mrna1;Name=ORF703;Parent=ORF703.path1;Dir=sensecoverage=100.0;identity=99.3;matches=1498;mismatches=2;indels=9;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	44824132	44824323	100	-	.	ID=ORF703.mrna1.exon1;Name=ORF703;Parent=ORF703.mrna1;Target=ORF703 1 192 +
Chr2	stalkie_big_nohaplotig	exon	44822751	44824058	99	-	.	ID=ORF703.mrna1.exon2;Name=ORF703;Parent=ORF703.mrna1;Target=ORF703 193 1509 +
Chr2	stalkie_big_nohaplotig	CDS	44824132	44824323	100	-	0	ID=ORF703.mrna1.cds1;Name=ORF703;Parent=ORF703.mrna1;Target=ORF703 1 192 +
Chr2	stalkie_big_nohaplotig	CDS	44822751	44824058	99	-	0	ID=ORF703.mrna1.cds2;Name=ORF703;Parent=ORF703.mrna1;Target=ORF703 193 1509 +
ChrX	stalkie_big_nohaplotig	mRNA	61077317	61084686	.	+	.	ID=FBgn0031759.1.mrna1;Name=FBgn0031759.1;Parent=FBgn0031759.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=5298;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	61077317	61078685	100	+	.	ID=FBgn0031759.1.mrna1.exon1;Name=FBgn0031759.1;Parent=FBgn0031759.1.mrna1;Target=FBgn0031759.1 1 1369 +
ChrX	stalkie_big_nohaplotig	exon	61078846	61080257	100	+	.	ID=FBgn0031759.1.mrna1.exon2;Name=FBgn0031759.1;Parent=FBgn0031759.1.mrna1;Target=FBgn0031759.1 1370 2781 +
ChrX	stalkie_big_nohaplotig	exon	61082170	61084686	100	+	.	ID=FBgn0031759.1.mrna1.exon3;Name=FBgn0031759.1;Parent=FBgn0031759.1.mrna1;Target=FBgn0031759.1 2782 5298 +
ChrX	stalkie_big_nohaplotig	CDS	61077317	61078685	100	+	0	ID=FBgn0031759.1.mrna1.cds1;Name=FBgn0031759.1;Parent=FBgn0031759.1.mrna1;Target=FBgn0031759.1 1 1369 +
ChrX	stalkie_big_nohaplotig	CDS	61078846	61080257	100	+	1	ID=FBgn0031759.1.mrna1.cds2;Name=FBgn0031759.1;Parent=FBgn0031759.1.mrna1;Target=FBgn0031759.1 1370 2781 +
ChrX	stalkie_big_nohaplotig	CDS	61082170	61084686	100	+	0	ID=FBgn0031759.1.mrna1.cds3;Name=FBgn0031759.1;Parent=FBgn0031759.1.mrna1;Target=FBgn0031759.1 2782 5298 +
Chr2	stalkie_big_nohaplotig	mRNA	89470311	89472941	.	-	.	ID=FBgn0039299.1.mrna1;Name=FBgn0039299.1;Parent=FBgn0039299.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=765;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	89472851	89472941	100	-	.	ID=FBgn0039299.1.mrna1.exon1;Name=FBgn0039299.1;Parent=FBgn0039299.1.mrna1;Target=FBgn0039299.1 1 91 +
Chr2	stalkie_big_nohaplotig	exon	89472477	89472714	100	-	.	ID=FBgn0039299.1.mrna1.exon2;Name=FBgn0039299.1;Parent=FBgn0039299.1.mrna1;Target=FBgn0039299.1 92 329 +
Chr2	stalkie_big_nohaplotig	exon	89471132	89471271	100	-	.	ID=FBgn0039299.1.mrna1.exon3;Name=FBgn0039299.1;Parent=FBgn0039299.1.mrna1;Target=FBgn0039299.1 330 469 +
Chr2	stalkie_big_nohaplotig	exon	89470311	89470606	100	-	.	ID=FBgn0039299.1.mrna1.exon4;Name=FBgn0039299.1;Parent=FBgn0039299.1.mrna1;Target=FBgn0039299.1 470 765 +
Chr2	stalkie_big_nohaplotig	CDS	89472851	89472941	100	-	0	ID=FBgn0039299.1.mrna1.cds1;Name=FBgn0039299.1;Parent=FBgn0039299.1.mrna1;Target=FBgn0039299.1 1 91 +
Chr2	stalkie_big_nohaplotig	CDS	89472477	89472714	100	-	1	ID=FBgn0039299.1.mrna1.cds2;Name=FBgn0039299.1;Parent=FBgn0039299.1.mrna1;Target=FBgn0039299.1 92 329 +
Chr2	stalkie_big_nohaplotig	CDS	89471132	89471271	100	-	2	ID=FBgn0039299.1.mrna1.cds3;Name=FBgn0039299.1;Parent=FBgn0039299.1.mrna1;Target=FBgn0039299.1 330 469 +
Chr2	stalkie_big_nohaplotig	CDS	89470311	89470606	100	-	1	ID=FBgn0039299.1.mrna1.cds4;Name=FBgn0039299.1;Parent=FBgn0039299.1.mrna1;Target=FBgn0039299.1 470 765 +
Chr2	stalkie_big_nohaplotig	mRNA	85629044	85638603	.	+	.	ID=FBgn0011785.1.mrna1;Name=FBgn0011785.1;Parent=FBgn0011785.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=6660;mismatches=12;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	85629044	85629095	100	+	.	ID=FBgn0011785.1.mrna1.exon1;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 1 52 +
Chr2	stalkie_big_nohaplotig	exon	85629274	85629332	100	+	.	ID=FBgn0011785.1.mrna1.exon2;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 53 111 +
Chr2	stalkie_big_nohaplotig	exon	85629394	85629423	96	+	.	ID=FBgn0011785.1.mrna1.exon3;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 112 141 +
Chr2	stalkie_big_nohaplotig	exon	85629999	85630058	98	+	.	ID=FBgn0011785.1.mrna1.exon4;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 142 201 +
Chr2	stalkie_big_nohaplotig	exon	85631107	85631353	100	+	.	ID=FBgn0011785.1.mrna1.exon5;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 202 448 +
Chr2	stalkie_big_nohaplotig	exon	85631414	85631574	100	+	.	ID=FBgn0011785.1.mrna1.exon6;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 449 609 +
Chr2	stalkie_big_nohaplotig	exon	85631632	85632278	99	+	.	ID=FBgn0011785.1.mrna1.exon7;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 610 1256 +
Chr2	stalkie_big_nohaplotig	exon	85632342	85632438	100	+	.	ID=FBgn0011785.1.mrna1.exon8;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 1257 1353 +
Chr2	stalkie_big_nohaplotig	exon	85632496	85632810	100	+	.	ID=FBgn0011785.1.mrna1.exon9;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 1354 1668 +
Chr2	stalkie_big_nohaplotig	exon	85632880	85633366	100	+	.	ID=FBgn0011785.1.mrna1.exon10;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 1669 2155 +
Chr2	stalkie_big_nohaplotig	exon	85633429	85634837	99	+	.	ID=FBgn0011785.1.mrna1.exon11;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 2156 3564 +
Chr2	stalkie_big_nohaplotig	exon	85634896	85635155	100	+	.	ID=FBgn0011785.1.mrna1.exon12;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 3565 3824 +
Chr2	stalkie_big_nohaplotig	exon	85635215	85635376	100	+	.	ID=FBgn0011785.1.mrna1.exon13;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 3825 3986 +
Chr2	stalkie_big_nohaplotig	exon	85635434	85635707	100	+	.	ID=FBgn0011785.1.mrna1.exon14;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 3987 4260 +
Chr2	stalkie_big_nohaplotig	exon	85636063	85637292	99	+	.	ID=FBgn0011785.1.mrna1.exon15;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 4261 5490 +
Chr2	stalkie_big_nohaplotig	exon	85637350	85637590	99	+	.	ID=FBgn0011785.1.mrna1.exon16;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 5491 5731 +
Chr2	stalkie_big_nohaplotig	exon	85637663	85638603	100	+	.	ID=FBgn0011785.1.mrna1.exon17;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 5732 6672 +
Chr2	stalkie_big_nohaplotig	CDS	85629044	85629095	100	+	0	ID=FBgn0011785.1.mrna1.cds1;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 1 52 +
Chr2	stalkie_big_nohaplotig	CDS	85629274	85629332	100	+	1	ID=FBgn0011785.1.mrna1.cds2;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 53 111 +
Chr2	stalkie_big_nohaplotig	CDS	85629394	85629423	96	+	0	ID=FBgn0011785.1.mrna1.cds3;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 112 141 +
Chr2	stalkie_big_nohaplotig	CDS	85629999	85630058	98	+	0	ID=FBgn0011785.1.mrna1.cds4;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 142 201 +
Chr2	stalkie_big_nohaplotig	CDS	85631107	85631353	100	+	0	ID=FBgn0011785.1.mrna1.cds5;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 202 448 +
Chr2	stalkie_big_nohaplotig	CDS	85631414	85631574	100	+	1	ID=FBgn0011785.1.mrna1.cds6;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 449 609 +
Chr2	stalkie_big_nohaplotig	CDS	85631632	85632278	99	+	0	ID=FBgn0011785.1.mrna1.cds7;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 610 1256 +
Chr2	stalkie_big_nohaplotig	CDS	85632342	85632438	100	+	2	ID=FBgn0011785.1.mrna1.cds8;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 1257 1353 +
Chr2	stalkie_big_nohaplotig	CDS	85632496	85632810	100	+	0	ID=FBgn0011785.1.mrna1.cds9;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 1354 1668 +
Chr2	stalkie_big_nohaplotig	CDS	85632880	85633366	100	+	0	ID=FBgn0011785.1.mrna1.cds10;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 1669 2155 +
Chr2	stalkie_big_nohaplotig	CDS	85633429	85634837	99	+	1	ID=FBgn0011785.1.mrna1.cds11;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 2156 3564 +
Chr2	stalkie_big_nohaplotig	CDS	85634896	85635155	100	+	0	ID=FBgn0011785.1.mrna1.cds12;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 3565 3824 +
Chr2	stalkie_big_nohaplotig	CDS	85635215	85635376	100	+	2	ID=FBgn0011785.1.mrna1.cds13;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 3825 3986 +
Chr2	stalkie_big_nohaplotig	CDS	85635434	85635707	100	+	2	ID=FBgn0011785.1.mrna1.cds14;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 3987 4260 +
Chr2	stalkie_big_nohaplotig	CDS	85636063	85637292	99	+	0	ID=FBgn0011785.1.mrna1.cds15;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 4261 5490 +
Chr2	stalkie_big_nohaplotig	CDS	85637350	85637590	99	+	0	ID=FBgn0011785.1.mrna1.cds16;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 5491 5731 +
Chr2	stalkie_big_nohaplotig	CDS	85637663	85638603	100	+	1	ID=FBgn0011785.1.mrna1.cds17;Name=FBgn0011785.1;Parent=FBgn0011785.1.mrna1;Target=FBgn0011785.1 5732 6672 +
Chr2	stalkie_big_nohaplotig	mRNA	143883093	143904794	.	+	.	ID=FBgn0039831.1.mrna1;Name=FBgn0039831.1;Parent=FBgn0039831.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1944;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	143883093	143883234	100	+	.	ID=FBgn0039831.1.mrna1.exon1;Name=FBgn0039831.1;Parent=FBgn0039831.1.mrna1;Target=FBgn0039831.1 1 142 +
Chr2	stalkie_big_nohaplotig	exon	143901190	143901399	100	+	.	ID=FBgn0039831.1.mrna1.exon2;Name=FBgn0039831.1;Parent=FBgn0039831.1.mrna1;Target=FBgn0039831.1 143 352 +
Chr2	stalkie_big_nohaplotig	exon	143902723	143902831	100	+	.	ID=FBgn0039831.1.mrna1.exon3;Name=FBgn0039831.1;Parent=FBgn0039831.1.mrna1;Target=FBgn0039831.1 353 461 +
Chr2	stalkie_big_nohaplotig	exon	143902901	143903038	99	+	.	ID=FBgn0039831.1.mrna1.exon4;Name=FBgn0039831.1;Parent=FBgn0039831.1.mrna1;Target=FBgn0039831.1 462 599 +
Chr2	stalkie_big_nohaplotig	exon	143903447	143904794	99	+	.	ID=FBgn0039831.1.mrna1.exon5;Name=FBgn0039831.1;Parent=FBgn0039831.1.mrna1;Target=FBgn0039831.1 600 1947 +
Chr2	stalkie_big_nohaplotig	CDS	143883093	143883234	100	+	0	ID=FBgn0039831.1.mrna1.cds1;Name=FBgn0039831.1;Parent=FBgn0039831.1.mrna1;Target=FBgn0039831.1 1 142 +
Chr2	stalkie_big_nohaplotig	CDS	143901190	143901399	100	+	1	ID=FBgn0039831.1.mrna1.cds2;Name=FBgn0039831.1;Parent=FBgn0039831.1.mrna1;Target=FBgn0039831.1 143 352 +
Chr2	stalkie_big_nohaplotig	CDS	143902723	143902831	100	+	1	ID=FBgn0039831.1.mrna1.cds3;Name=FBgn0039831.1;Parent=FBgn0039831.1.mrna1;Target=FBgn0039831.1 353 461 +
Chr2	stalkie_big_nohaplotig	CDS	143902901	143903038	99	+	2	ID=FBgn0039831.1.mrna1.cds4;Name=FBgn0039831.1;Parent=FBgn0039831.1.mrna1;Target=FBgn0039831.1 462 599 +
Chr2	stalkie_big_nohaplotig	CDS	143903447	143904794	99	+	2	ID=FBgn0039831.1.mrna1.cds5;Name=FBgn0039831.1;Parent=FBgn0039831.1.mrna1;Target=FBgn0039831.1 600 1947 +
Chr2	stalkie_big_nohaplotig	mRNA	36804743	36805537	.	+	.	ID=FBgn0034231.1.mrna1;Name=FBgn0034231.1;Parent=FBgn0034231.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=622;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	36804743	36804920	100	+	.	ID=FBgn0034231.1.mrna1.exon1;Name=FBgn0034231.1;Parent=FBgn0034231.1.mrna1;Target=FBgn0034231.1 1 178 +
Chr2	stalkie_big_nohaplotig	exon	36805025	36805261	99	+	.	ID=FBgn0034231.1.mrna1.exon2;Name=FBgn0034231.1;Parent=FBgn0034231.1.mrna1;Target=FBgn0034231.1 179 415 +
Chr2	stalkie_big_nohaplotig	exon	36805329	36805537	99	+	.	ID=FBgn0034231.1.mrna1.exon3;Name=FBgn0034231.1;Parent=FBgn0034231.1.mrna1;Target=FBgn0034231.1 416 624 +
Chr2	stalkie_big_nohaplotig	CDS	36804743	36804920	100	+	0	ID=FBgn0034231.1.mrna1.cds1;Name=FBgn0034231.1;Parent=FBgn0034231.1.mrna1;Target=FBgn0034231.1 1 178 +
Chr2	stalkie_big_nohaplotig	CDS	36805025	36805261	99	+	1	ID=FBgn0034231.1.mrna1.cds2;Name=FBgn0034231.1;Parent=FBgn0034231.1.mrna1;Target=FBgn0034231.1 179 415 +
Chr2	stalkie_big_nohaplotig	CDS	36805329	36805537	99	+	1	ID=FBgn0034231.1.mrna1.cds3;Name=FBgn0034231.1;Parent=FBgn0034231.1.mrna1;Target=FBgn0034231.1 416 624 +
Chr2	stalkie_big_nohaplotig	mRNA	16696121	16697161	.	+	.	ID=ORF2585.mrna1;Name=ORF2585;Parent=ORF2585.path1;Dir=sensecoverage=100.0;identity=99.2;matches=830;mismatches=7;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	16696121	16696295	100	+	.	ID=ORF2585.mrna1.exon1;Name=ORF2585;Parent=ORF2585.mrna1;Target=ORF2585 1 175 +
Chr2	stalkie_big_nohaplotig	exon	16696356	16696391	100	+	.	ID=ORF2585.mrna1.exon2;Name=ORF2585;Parent=ORF2585.mrna1;Target=ORF2585 176 211 +
Chr2	stalkie_big_nohaplotig	exon	16696475	16697011	98	+	.	ID=ORF2585.mrna1.exon3;Name=ORF2585;Parent=ORF2585.mrna1;Target=ORF2585 212 748 +
Chr2	stalkie_big_nohaplotig	exon	16697073	16697161	100	+	.	ID=ORF2585.mrna1.exon4;Name=ORF2585;Parent=ORF2585.mrna1;Target=ORF2585 749 837 +
Chr2	stalkie_big_nohaplotig	CDS	16696121	16696295	100	+	0	ID=ORF2585.mrna1.cds1;Name=ORF2585;Parent=ORF2585.mrna1;Target=ORF2585 1 175 +
Chr2	stalkie_big_nohaplotig	CDS	16696356	16696391	100	+	1	ID=ORF2585.mrna1.cds2;Name=ORF2585;Parent=ORF2585.mrna1;Target=ORF2585 176 211 +
Chr2	stalkie_big_nohaplotig	CDS	16696475	16697011	98	+	1	ID=ORF2585.mrna1.cds3;Name=ORF2585;Parent=ORF2585.mrna1;Target=ORF2585 212 748 +
Chr2	stalkie_big_nohaplotig	CDS	16697073	16697161	100	+	1	ID=ORF2585.mrna1.cds4;Name=ORF2585;Parent=ORF2585.mrna1;Target=ORF2585 749 837 +
Chr1	stalkie_big_nohaplotig	mRNA	8726370	8739087	.	+	.	ID=FBgn0263456.1.mrna1;Name=FBgn0263456.1;Parent=FBgn0263456.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=2696;mismatches=7;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	8726370	8726432	100	+	.	ID=FBgn0263456.1.mrna1.exon1;Name=FBgn0263456.1;Parent=FBgn0263456.1.mrna1;Target=FBgn0263456.1 1 63 +
Chr1	stalkie_big_nohaplotig	exon	8729457	8729686	100	+	.	ID=FBgn0263456.1.mrna1.exon2;Name=FBgn0263456.1;Parent=FBgn0263456.1.mrna1;Target=FBgn0263456.1 64 293 +
Chr1	stalkie_big_nohaplotig	exon	8732210	8733293	99	+	.	ID=FBgn0263456.1.mrna1.exon3;Name=FBgn0263456.1;Parent=FBgn0263456.1.mrna1;Target=FBgn0263456.1 294 1377 +
Chr1	stalkie_big_nohaplotig	exon	8733351	8733483	98	+	.	ID=FBgn0263456.1.mrna1.exon4;Name=FBgn0263456.1;Parent=FBgn0263456.1.mrna1;Target=FBgn0263456.1 1378 1510 +
Chr1	stalkie_big_nohaplotig	exon	8734122	8734300	100	+	.	ID=FBgn0263456.1.mrna1.exon5;Name=FBgn0263456.1;Parent=FBgn0263456.1.mrna1;Target=FBgn0263456.1 1511 1689 +
Chr1	stalkie_big_nohaplotig	exon	8734362	8734998	100	+	.	ID=FBgn0263456.1.mrna1.exon6;Name=FBgn0263456.1;Parent=FBgn0263456.1.mrna1;Target=FBgn0263456.1 1690 2326 +
Chr1	stalkie_big_nohaplotig	exon	8735077	8735130	100	+	.	ID=FBgn0263456.1.mrna1.exon7;Name=FBgn0263456.1;Parent=FBgn0263456.1.mrna1;Target=FBgn0263456.1 2327 2380 +
Chr1	stalkie_big_nohaplotig	exon	8737491	8737516	100	+	.	ID=FBgn0263456.1.mrna1.exon8;Name=FBgn0263456.1;Parent=FBgn0263456.1.mrna1;Target=FBgn0263456.1 2381 2406 +
Chr1	stalkie_big_nohaplotig	exon	8738791	8739087	99	+	.	ID=FBgn0263456.1.mrna1.exon9;Name=FBgn0263456.1;Parent=FBgn0263456.1.mrna1;Target=FBgn0263456.1 2407 2703 +
Chr1	stalkie_big_nohaplotig	CDS	8726370	8726432	100	+	0	ID=FBgn0263456.1.mrna1.cds1;Name=FBgn0263456.1;Parent=FBgn0263456.1.mrna1;Target=FBgn0263456.1 1 63 +
Chr1	stalkie_big_nohaplotig	CDS	8729457	8729686	100	+	0	ID=FBgn0263456.1.mrna1.cds2;Name=FBgn0263456.1;Parent=FBgn0263456.1.mrna1;Target=FBgn0263456.1 64 293 +
Chr1	stalkie_big_nohaplotig	CDS	8732210	8733293	99	+	2	ID=FBgn0263456.1.mrna1.cds3;Name=FBgn0263456.1;Parent=FBgn0263456.1.mrna1;Target=FBgn0263456.1 294 1377 +
Chr1	stalkie_big_nohaplotig	CDS	8733351	8733483	98	+	0	ID=FBgn0263456.1.mrna1.cds4;Name=FBgn0263456.1;Parent=FBgn0263456.1.mrna1;Target=FBgn0263456.1 1378 1510 +
Chr1	stalkie_big_nohaplotig	CDS	8734122	8734300	100	+	1	ID=FBgn0263456.1.mrna1.cds5;Name=FBgn0263456.1;Parent=FBgn0263456.1.mrna1;Target=FBgn0263456.1 1511 1689 +
Chr1	stalkie_big_nohaplotig	CDS	8734362	8734998	100	+	0	ID=FBgn0263456.1.mrna1.cds6;Name=FBgn0263456.1;Parent=FBgn0263456.1.mrna1;Target=FBgn0263456.1 1690 2326 +
Chr1	stalkie_big_nohaplotig	CDS	8735077	8735130	100	+	1	ID=FBgn0263456.1.mrna1.cds7;Name=FBgn0263456.1;Parent=FBgn0263456.1.mrna1;Target=FBgn0263456.1 2327 2380 +
Chr1	stalkie_big_nohaplotig	CDS	8737491	8737516	100	+	1	ID=FBgn0263456.1.mrna1.cds8;Name=FBgn0263456.1;Parent=FBgn0263456.1.mrna1;Target=FBgn0263456.1 2381 2406 +
Chr1	stalkie_big_nohaplotig	CDS	8738791	8739087	99	+	0	ID=FBgn0263456.1.mrna1.cds9;Name=FBgn0263456.1;Parent=FBgn0263456.1.mrna1;Target=FBgn0263456.1 2407 2703 +
Chr2	stalkie_big_nohaplotig	mRNA	145579877	145602055	.	-	.	ID=FBgn0085376.mrna1;Name=FBgn0085376;Parent=FBgn0085376.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1447;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	145601966	145602055	100	-	.	ID=FBgn0085376.mrna1.exon1;Name=FBgn0085376;Parent=FBgn0085376.mrna1;Target=FBgn0085376 1 90 +
Chr2	stalkie_big_nohaplotig	exon	145589600	145589704	100	-	.	ID=FBgn0085376.mrna1.exon2;Name=FBgn0085376;Parent=FBgn0085376.mrna1;Target=FBgn0085376 91 195 +
Chr2	stalkie_big_nohaplotig	exon	145588499	145588623	99	-	.	ID=FBgn0085376.mrna1.exon3;Name=FBgn0085376;Parent=FBgn0085376.mrna1;Target=FBgn0085376 196 320 +
Chr2	stalkie_big_nohaplotig	exon	145587421	145587518	100	-	.	ID=FBgn0085376.mrna1.exon4;Name=FBgn0085376;Parent=FBgn0085376.mrna1;Target=FBgn0085376 321 418 +
Chr2	stalkie_big_nohaplotig	exon	145586753	145586961	99	-	.	ID=FBgn0085376.mrna1.exon5;Name=FBgn0085376;Parent=FBgn0085376.mrna1;Target=FBgn0085376 419 627 +
Chr2	stalkie_big_nohaplotig	exon	145583273	145583425	100	-	.	ID=FBgn0085376.mrna1.exon6;Name=FBgn0085376;Parent=FBgn0085376.mrna1;Target=FBgn0085376 628 780 +
Chr2	stalkie_big_nohaplotig	exon	145582450	145582622	99	-	.	ID=FBgn0085376.mrna1.exon7;Name=FBgn0085376;Parent=FBgn0085376.mrna1;Target=FBgn0085376 781 953 +
Chr2	stalkie_big_nohaplotig	exon	145580616	145580804	99	-	.	ID=FBgn0085376.mrna1.exon8;Name=FBgn0085376;Parent=FBgn0085376.mrna1;Target=FBgn0085376 954 1142 +
Chr2	stalkie_big_nohaplotig	exon	145579877	145580186	99	-	.	ID=FBgn0085376.mrna1.exon9;Name=FBgn0085376;Parent=FBgn0085376.mrna1;Target=FBgn0085376 1143 1452 +
Chr2	stalkie_big_nohaplotig	CDS	145601966	145602055	100	-	0	ID=FBgn0085376.mrna1.cds1;Name=FBgn0085376;Parent=FBgn0085376.mrna1;Target=FBgn0085376 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	145589600	145589704	100	-	0	ID=FBgn0085376.mrna1.cds2;Name=FBgn0085376;Parent=FBgn0085376.mrna1;Target=FBgn0085376 91 195 +
Chr2	stalkie_big_nohaplotig	CDS	145588499	145588623	99	-	0	ID=FBgn0085376.mrna1.cds3;Name=FBgn0085376;Parent=FBgn0085376.mrna1;Target=FBgn0085376 196 320 +
Chr2	stalkie_big_nohaplotig	CDS	145587421	145587518	100	-	2	ID=FBgn0085376.mrna1.cds4;Name=FBgn0085376;Parent=FBgn0085376.mrna1;Target=FBgn0085376 321 418 +
Chr2	stalkie_big_nohaplotig	CDS	145586753	145586961	99	-	1	ID=FBgn0085376.mrna1.cds5;Name=FBgn0085376;Parent=FBgn0085376.mrna1;Target=FBgn0085376 419 627 +
Chr2	stalkie_big_nohaplotig	CDS	145583273	145583425	100	-	0	ID=FBgn0085376.mrna1.cds6;Name=FBgn0085376;Parent=FBgn0085376.mrna1;Target=FBgn0085376 628 780 +
Chr2	stalkie_big_nohaplotig	CDS	145582450	145582622	99	-	0	ID=FBgn0085376.mrna1.cds7;Name=FBgn0085376;Parent=FBgn0085376.mrna1;Target=FBgn0085376 781 953 +
Chr2	stalkie_big_nohaplotig	CDS	145580616	145580804	99	-	2	ID=FBgn0085376.mrna1.cds8;Name=FBgn0085376;Parent=FBgn0085376.mrna1;Target=FBgn0085376 954 1142 +
Chr2	stalkie_big_nohaplotig	CDS	145579877	145580186	99	-	2	ID=FBgn0085376.mrna1.cds9;Name=FBgn0085376;Parent=FBgn0085376.mrna1;Target=FBgn0085376 1143 1452 +
Chr1	stalkie_big_nohaplotig	mRNA	19036343	19037377	.	+	.	ID=FBgn0035283.1.mrna1;Name=FBgn0035283.1;Parent=FBgn0035283.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=973;mismatches=2;indels=3;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	19036343	19036549	100	+	.	ID=FBgn0035283.1.mrna1.exon1;Name=FBgn0035283.1;Parent=FBgn0035283.1.mrna1;Target=FBgn0035283.1 1 207 +
Chr1	stalkie_big_nohaplotig	exon	19036607	19037377	99	+	.	ID=FBgn0035283.1.mrna1.exon2;Name=FBgn0035283.1;Parent=FBgn0035283.1.mrna1;Target=FBgn0035283.1 208 975 +
Chr1	stalkie_big_nohaplotig	CDS	19036343	19036549	100	+	0	ID=FBgn0035283.1.mrna1.cds1;Name=FBgn0035283.1;Parent=FBgn0035283.1.mrna1;Target=FBgn0035283.1 1 207 +
Chr1	stalkie_big_nohaplotig	CDS	19036607	19037377	99	+	0	ID=FBgn0035283.1.mrna1.cds2;Name=FBgn0035283.1;Parent=FBgn0035283.1.mrna1;Target=FBgn0035283.1 208 975 +
Chr2	stalkie_big_nohaplotig	mRNA	33542142	33548192	.	-	.	ID=FBgn0033998.1.mrna1;Name=FBgn0033998.1;Parent=FBgn0033998.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=2650;mismatches=9;indels=1;unknowns=13
Chr2	stalkie_big_nohaplotig	exon	33548143	33548192	98	-	.	ID=FBgn0033998.1.mrna1.exon1;Name=FBgn0033998.1;Parent=FBgn0033998.1.mrna1;Target=FBgn0033998.1 1 51 +
Chr2	stalkie_big_nohaplotig	exon	33545651	33546175	99	-	.	ID=FBgn0033998.1.mrna1.exon2;Name=FBgn0033998.1;Parent=FBgn0033998.1.mrna1;Target=FBgn0033998.1 52 576 +
Chr2	stalkie_big_nohaplotig	exon	33545501	33545591	100	-	.	ID=FBgn0033998.1.mrna1.exon3;Name=FBgn0033998.1;Parent=FBgn0033998.1.mrna1;Target=FBgn0033998.1 577 667 +
Chr2	stalkie_big_nohaplotig	exon	33543589	33544430	99	-	.	ID=FBgn0033998.1.mrna1.exon4;Name=FBgn0033998.1;Parent=FBgn0033998.1.mrna1;Target=FBgn0033998.1 668 1509 +
Chr2	stalkie_big_nohaplotig	exon	33543389	33543524	99	-	.	ID=FBgn0033998.1.mrna1.exon5;Name=FBgn0033998.1;Parent=FBgn0033998.1.mrna1;Target=FBgn0033998.1 1510 1645 +
Chr2	stalkie_big_nohaplotig	exon	33543204	33543307	98	-	.	ID=FBgn0033998.1.mrna1.exon6;Name=FBgn0033998.1;Parent=FBgn0033998.1.mrna1;Target=FBgn0033998.1 1646 1749 +
Chr2	stalkie_big_nohaplotig	exon	33543006	33543133	100	-	.	ID=FBgn0033998.1.mrna1.exon7;Name=FBgn0033998.1;Parent=FBgn0033998.1.mrna1;Target=FBgn0033998.1 1750 1877 +
Chr2	stalkie_big_nohaplotig	exon	33542142	33542937	99	-	.	ID=FBgn0033998.1.mrna1.exon8;Name=FBgn0033998.1;Parent=FBgn0033998.1.mrna1;Target=FBgn0033998.1 1878 2673 +
Chr2	stalkie_big_nohaplotig	CDS	33548156	33548190	97	-	0	ID=FBgn0033998.1.mrna1.cds1;Name=FBgn0033998.1;Parent=FBgn0033998.1.mrna1;Target=FBgn0033998.1 3 38 +
ChrX	stalkie_big_nohaplotig	mRNA	18039615	18041112	.	-	.	ID=ORF788.mrna1;Name=ORF788;Parent=ORF788.path1;Dir=sensecoverage=100.0;identity=99.2;matches=1419;mismatches=12;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	18041052	18041112	95	-	.	ID=ORF788.mrna1.exon1;Name=ORF788;Parent=ORF788.mrna1;Target=ORF788 1 61 +
ChrX	stalkie_big_nohaplotig	exon	18039615	18040984	99	-	.	ID=ORF788.mrna1.exon2;Name=ORF788;Parent=ORF788.mrna1;Target=ORF788 62 1431 +
ChrX	stalkie_big_nohaplotig	CDS	18041052	18041112	95	-	0	ID=ORF788.mrna1.cds1;Name=ORF788;Parent=ORF788.mrna1;Target=ORF788 1 61 +
ChrX	stalkie_big_nohaplotig	CDS	18039615	18040984	99	-	1	ID=ORF788.mrna1.cds2;Name=ORF788;Parent=ORF788.mrna1;Target=ORF788 62 1431 +
Chr2	stalkie_big_nohaplotig	mRNA	44086325	44099851	.	+	.	ID=FBgn0034886.1.mrna2;Name=FBgn0034886.1;Parent=FBgn0034886.1.path2;Dir=sensecoverage=90.8;identity=100.0;matches=2271;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	44086325	44086381	100	+	.	ID=FBgn0034886.1.mrna2.exon1;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 232 288 +
Chr2	stalkie_big_nohaplotig	exon	44086563	44086768	100	+	.	ID=FBgn0034886.1.mrna2.exon2;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 289 494 +
Chr2	stalkie_big_nohaplotig	exon	44087168	44087227	100	+	.	ID=FBgn0034886.1.mrna2.exon3;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 495 554 +
Chr2	stalkie_big_nohaplotig	exon	44092472	44092526	100	+	.	ID=FBgn0034886.1.mrna2.exon4;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 555 609 +
Chr2	stalkie_big_nohaplotig	exon	44092625	44092723	100	+	.	ID=FBgn0034886.1.mrna2.exon5;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 610 708 +
Chr2	stalkie_big_nohaplotig	exon	44093268	44093378	100	+	.	ID=FBgn0034886.1.mrna2.exon6;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 709 819 +
Chr2	stalkie_big_nohaplotig	exon	44093599	44093768	100	+	.	ID=FBgn0034886.1.mrna2.exon7;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 820 989 +
Chr2	stalkie_big_nohaplotig	exon	44095907	44096117	100	+	.	ID=FBgn0034886.1.mrna2.exon8;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 990 1200 +
Chr2	stalkie_big_nohaplotig	exon	44096772	44096939	100	+	.	ID=FBgn0034886.1.mrna2.exon9;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 1201 1368 +
Chr2	stalkie_big_nohaplotig	exon	44097003	44097095	100	+	.	ID=FBgn0034886.1.mrna2.exon10;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 1369 1461 +
Chr2	stalkie_big_nohaplotig	exon	44097162	44097410	100	+	.	ID=FBgn0034886.1.mrna2.exon11;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 1462 1710 +
Chr2	stalkie_big_nohaplotig	exon	44097479	44097698	100	+	.	ID=FBgn0034886.1.mrna2.exon12;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 1711 1930 +
Chr2	stalkie_big_nohaplotig	exon	44097758	44097918	100	+	.	ID=FBgn0034886.1.mrna2.exon13;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 1931 2091 +
Chr2	stalkie_big_nohaplotig	exon	44099375	44099642	100	+	.	ID=FBgn0034886.1.mrna2.exon14;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 2092 2359 +
Chr2	stalkie_big_nohaplotig	exon	44099709	44099851	100	+	.	ID=FBgn0034886.1.mrna2.exon15;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 2360 2502 +
Chr2	stalkie_big_nohaplotig	CDS	44086325	44086381	100	+	0	ID=FBgn0034886.1.mrna2.cds1;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 232 288 +
Chr2	stalkie_big_nohaplotig	CDS	44086563	44086768	100	+	0	ID=FBgn0034886.1.mrna2.cds2;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 289 494 +
Chr2	stalkie_big_nohaplotig	CDS	44087168	44087227	100	+	2	ID=FBgn0034886.1.mrna2.cds3;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 495 554 +
Chr2	stalkie_big_nohaplotig	CDS	44092472	44092526	100	+	2	ID=FBgn0034886.1.mrna2.cds4;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 555 609 +
Chr2	stalkie_big_nohaplotig	CDS	44092625	44092723	100	+	0	ID=FBgn0034886.1.mrna2.cds5;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 610 708 +
Chr2	stalkie_big_nohaplotig	CDS	44093268	44093378	100	+	0	ID=FBgn0034886.1.mrna2.cds6;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 709 819 +
Chr2	stalkie_big_nohaplotig	CDS	44093599	44093768	100	+	0	ID=FBgn0034886.1.mrna2.cds7;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 820 989 +
Chr2	stalkie_big_nohaplotig	CDS	44095907	44096117	100	+	2	ID=FBgn0034886.1.mrna2.cds8;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 990 1200 +
Chr2	stalkie_big_nohaplotig	CDS	44096772	44096939	100	+	0	ID=FBgn0034886.1.mrna2.cds9;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 1201 1368 +
Chr2	stalkie_big_nohaplotig	CDS	44097003	44097095	100	+	0	ID=FBgn0034886.1.mrna2.cds10;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 1369 1461 +
Chr2	stalkie_big_nohaplotig	CDS	44097162	44097410	100	+	0	ID=FBgn0034886.1.mrna2.cds11;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 1462 1710 +
Chr2	stalkie_big_nohaplotig	CDS	44097479	44097698	100	+	0	ID=FBgn0034886.1.mrna2.cds12;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 1711 1930 +
Chr2	stalkie_big_nohaplotig	CDS	44097758	44097918	100	+	1	ID=FBgn0034886.1.mrna2.cds13;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 1931 2091 +
Chr2	stalkie_big_nohaplotig	CDS	44099375	44099642	100	+	0	ID=FBgn0034886.1.mrna2.cds14;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 2092 2359 +
Chr2	stalkie_big_nohaplotig	CDS	44099709	44099851	100	+	1	ID=FBgn0034886.1.mrna2.cds15;Name=FBgn0034886.1;Parent=FBgn0034886.1.mrna2;Target=FBgn0034886.1 2360 2502 +
Chr2	stalkie_big_nohaplotig	mRNA	26980864	26981509	.	-	.	ID=FBgn0034470.1.mrna1;Name=FBgn0034470.1;Parent=FBgn0034470.1.path1;Dir=sensecoverage=100.0;identity=98.6;matches=491;mismatches=7;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	26981360	26981509	98	-	.	ID=FBgn0034470.1.mrna1.exon1;Name=FBgn0034470.1;Parent=FBgn0034470.1.mrna1;Target=FBgn0034470.1 1 150 +
Chr2	stalkie_big_nohaplotig	exon	26980864	26981211	98	-	.	ID=FBgn0034470.1.mrna1.exon2;Name=FBgn0034470.1;Parent=FBgn0034470.1.mrna1;Target=FBgn0034470.1 151 498 +
Chr2	stalkie_big_nohaplotig	CDS	26981360	26981509	98	-	0	ID=FBgn0034470.1.mrna1.cds1;Name=FBgn0034470.1;Parent=FBgn0034470.1.mrna1;Target=FBgn0034470.1 1 150 +
Chr2	stalkie_big_nohaplotig	CDS	26980864	26981211	98	-	0	ID=FBgn0034470.1.mrna1.cds2;Name=FBgn0034470.1;Parent=FBgn0034470.1.mrna1;Target=FBgn0034470.1 151 498 +
Chr2	stalkie_big_nohaplotig	mRNA	143932048	143936014	.	+	.	ID=FBgn0037672.1.mrna1;Name=FBgn0037672.1;Parent=FBgn0037672.1.path1;Dir=sensecoverage=99.5;identity=99.1;matches=1039;mismatches=5;indels=4;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	143932048	143932681	98	+	.	ID=FBgn0037672.1.mrna1.exon1;Name=FBgn0037672.1;Parent=FBgn0037672.1.mrna1;Target=FBgn0037672.1 6 643 +
Chr2	stalkie_big_nohaplotig	exon	143935538	143935670	100	+	.	ID=FBgn0037672.1.mrna1.exon2;Name=FBgn0037672.1;Parent=FBgn0037672.1.mrna1;Target=FBgn0037672.1 644 776 +
Chr2	stalkie_big_nohaplotig	exon	143935738	143936014	99	+	.	ID=FBgn0037672.1.mrna1.exon3;Name=FBgn0037672.1;Parent=FBgn0037672.1.mrna1;Target=FBgn0037672.1 777 1053 +
Chr2	stalkie_big_nohaplotig	CDS	143932048	143932160	96	+	0	ID=FBgn0037672.1.mrna1.cds1;Name=FBgn0037672.1;Parent=FBgn0037672.1.mrna1;Target=FBgn0037672.1 6 122 +
Chr2	stalkie_big_nohaplotig	mRNA	89588054	89591025	.	-	.	ID=FBgn0003205.1.mrna1;Name=FBgn0003205.1;Parent=FBgn0003205.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=588;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	89590869	89591025	100	-	.	ID=FBgn0003205.1.mrna1.exon1;Name=FBgn0003205.1;Parent=FBgn0003205.1.mrna1;Target=FBgn0003205.1 1 157 +
Chr2	stalkie_big_nohaplotig	exon	89590663	89590803	100	-	.	ID=FBgn0003205.1.mrna1.exon2;Name=FBgn0003205.1;Parent=FBgn0003205.1.mrna1;Target=FBgn0003205.1 158 298 +
Chr2	stalkie_big_nohaplotig	exon	89588290	89588405	100	-	.	ID=FBgn0003205.1.mrna1.exon3;Name=FBgn0003205.1;Parent=FBgn0003205.1.mrna1;Target=FBgn0003205.1 299 414 +
Chr2	stalkie_big_nohaplotig	exon	89588054	89588227	100	-	.	ID=FBgn0003205.1.mrna1.exon4;Name=FBgn0003205.1;Parent=FBgn0003205.1.mrna1;Target=FBgn0003205.1 415 588 +
Chr2	stalkie_big_nohaplotig	CDS	89590869	89591025	100	-	0	ID=FBgn0003205.1.mrna1.cds1;Name=FBgn0003205.1;Parent=FBgn0003205.1.mrna1;Target=FBgn0003205.1 1 157 +
Chr2	stalkie_big_nohaplotig	CDS	89590663	89590803	100	-	1	ID=FBgn0003205.1.mrna1.cds2;Name=FBgn0003205.1;Parent=FBgn0003205.1.mrna1;Target=FBgn0003205.1 158 298 +
Chr2	stalkie_big_nohaplotig	CDS	89588290	89588405	100	-	1	ID=FBgn0003205.1.mrna1.cds3;Name=FBgn0003205.1;Parent=FBgn0003205.1.mrna1;Target=FBgn0003205.1 299 414 +
Chr2	stalkie_big_nohaplotig	CDS	89588054	89588227	100	-	0	ID=FBgn0003205.1.mrna1.cds4;Name=FBgn0003205.1;Parent=FBgn0003205.1.mrna1;Target=FBgn0003205.1 415 588 +
Chr2	stalkie_big_nohaplotig	mRNA	85526276	85530490	.	+	.	ID=FBgn0039196.1.mrna1;Name=FBgn0039196.1;Parent=FBgn0039196.1.path1;Dir=sensecoverage=100.0;identity=98.8;matches=1776;mismatches=14;indels=7;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	85526276	85526954	98	+	.	ID=FBgn0039196.1.mrna1.exon1;Name=FBgn0039196.1;Parent=FBgn0039196.1.mrna1;Target=FBgn0039196.1 1 679 +
Chr2	stalkie_big_nohaplotig	exon	85529278	85530169	98	+	.	ID=FBgn0039196.1.mrna1.exon2;Name=FBgn0039196.1;Parent=FBgn0039196.1.mrna1;Target=FBgn0039196.1 680 1577 +
Chr2	stalkie_big_nohaplotig	exon	85530272	85530490	99	+	.	ID=FBgn0039196.1.mrna1.exon3;Name=FBgn0039196.1;Parent=FBgn0039196.1.mrna1;Target=FBgn0039196.1 1578 1797 +
Chr2	stalkie_big_nohaplotig	CDS	85526276	85526954	98	+	0	ID=FBgn0039196.1.mrna1.cds1;Name=FBgn0039196.1;Parent=FBgn0039196.1.mrna1;Target=FBgn0039196.1 1 679 +
Chr2	stalkie_big_nohaplotig	CDS	85529278	85530169	98	+	1	ID=FBgn0039196.1.mrna1.cds2;Name=FBgn0039196.1;Parent=FBgn0039196.1.mrna1;Target=FBgn0039196.1 680 1577 +
Chr2	stalkie_big_nohaplotig	CDS	85530272	85530490	99	+	2	ID=FBgn0039196.1.mrna1.cds3;Name=FBgn0039196.1;Parent=FBgn0039196.1.mrna1;Target=FBgn0039196.1 1578 1797 +
Chr2	stalkie_big_nohaplotig	mRNA	16067808	16104390	.	-	.	ID=FBgn0020621.1.mrna2;Name=FBgn0020621.1;Parent=FBgn0020621.1.path2;Dir=sensecoverage=98.1;identity=99.7;matches=3460;mismatches=11;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	16104072	16104390	99	-	.	ID=FBgn0020621.1.mrna2.exon1;Name=FBgn0020621.1;Parent=FBgn0020621.1.mrna2;Target=FBgn0020621.1 67 385 +
Chr2	stalkie_big_nohaplotig	exon	16096210	16096748	99	-	.	ID=FBgn0020621.1.mrna2.exon2;Name=FBgn0020621.1;Parent=FBgn0020621.1.mrna2;Target=FBgn0020621.1 386 924 +
Chr2	stalkie_big_nohaplotig	exon	16082333	16083598	99	-	.	ID=FBgn0020621.1.mrna2.exon3;Name=FBgn0020621.1;Parent=FBgn0020621.1.mrna2;Target=FBgn0020621.1 925 2190 +
Chr2	stalkie_big_nohaplotig	exon	16070891	16071475	100	-	.	ID=FBgn0020621.1.mrna2.exon4;Name=FBgn0020621.1;Parent=FBgn0020621.1.mrna2;Target=FBgn0020621.1 2191 2775 +
Chr2	stalkie_big_nohaplotig	exon	16070634	16070823	100	-	.	ID=FBgn0020621.1.mrna2.exon5;Name=FBgn0020621.1;Parent=FBgn0020621.1.mrna2;Target=FBgn0020621.1 2776 2965 +
Chr2	stalkie_big_nohaplotig	exon	16070181	16070362	99	-	.	ID=FBgn0020621.1.mrna2.exon6;Name=FBgn0020621.1;Parent=FBgn0020621.1.mrna2;Target=FBgn0020621.1 2966 3147 +
Chr2	stalkie_big_nohaplotig	exon	16069270	16069377	100	-	.	ID=FBgn0020621.1.mrna2.exon7;Name=FBgn0020621.1;Parent=FBgn0020621.1.mrna2;Target=FBgn0020621.1 3148 3255 +
Chr2	stalkie_big_nohaplotig	exon	16068030	16068170	100	-	.	ID=FBgn0020621.1.mrna2.exon8;Name=FBgn0020621.1;Parent=FBgn0020621.1.mrna2;Target=FBgn0020621.1 3256 3396 +
Chr2	stalkie_big_nohaplotig	exon	16067808	16067948	99	-	.	ID=FBgn0020621.1.mrna2.exon9;Name=FBgn0020621.1;Parent=FBgn0020621.1.mrna2;Target=FBgn0020621.1 3397 3537 +
Chr2	stalkie_big_nohaplotig	CDS	16104072	16104390	99	-	0	ID=FBgn0020621.1.mrna2.cds1;Name=FBgn0020621.1;Parent=FBgn0020621.1.mrna2;Target=FBgn0020621.1 67 385 +
Chr2	stalkie_big_nohaplotig	CDS	16096210	16096748	99	-	1	ID=FBgn0020621.1.mrna2.cds2;Name=FBgn0020621.1;Parent=FBgn0020621.1.mrna2;Target=FBgn0020621.1 386 924 +
Chr2	stalkie_big_nohaplotig	CDS	16082333	16083598	99	-	0	ID=FBgn0020621.1.mrna2.cds3;Name=FBgn0020621.1;Parent=FBgn0020621.1.mrna2;Target=FBgn0020621.1 925 2190 +
Chr2	stalkie_big_nohaplotig	CDS	16070891	16071475	100	-	0	ID=FBgn0020621.1.mrna2.cds4;Name=FBgn0020621.1;Parent=FBgn0020621.1.mrna2;Target=FBgn0020621.1 2191 2775 +
Chr2	stalkie_big_nohaplotig	CDS	16070634	16070823	100	-	0	ID=FBgn0020621.1.mrna2.cds5;Name=FBgn0020621.1;Parent=FBgn0020621.1.mrna2;Target=FBgn0020621.1 2776 2965 +
Chr2	stalkie_big_nohaplotig	CDS	16070181	16070362	99	-	1	ID=FBgn0020621.1.mrna2.cds6;Name=FBgn0020621.1;Parent=FBgn0020621.1.mrna2;Target=FBgn0020621.1 2966 3147 +
Chr2	stalkie_big_nohaplotig	CDS	16069270	16069377	100	-	0	ID=FBgn0020621.1.mrna2.cds7;Name=FBgn0020621.1;Parent=FBgn0020621.1.mrna2;Target=FBgn0020621.1 3148 3255 +
Chr2	stalkie_big_nohaplotig	CDS	16068030	16068170	100	-	0	ID=FBgn0020621.1.mrna2.cds8;Name=FBgn0020621.1;Parent=FBgn0020621.1.mrna2;Target=FBgn0020621.1 3256 3396 +
Chr2	stalkie_big_nohaplotig	CDS	16067808	16067948	99	-	0	ID=FBgn0020621.1.mrna2.cds9;Name=FBgn0020621.1;Parent=FBgn0020621.1.mrna2;Target=FBgn0020621.1 3397 3537 +
ChrX	stalkie_big_nohaplotig	mRNA	66807073	66808260	.	-	.	ID=ORF1368.mrna1;Name=ORF1368;Parent=ORF1368.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1123;mismatches=2;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	66807456	66808260	99	-	.	ID=ORF1368.mrna1.exon1;Name=ORF1368;Parent=ORF1368.mrna1;Target=ORF1368 1 805 +
ChrX	stalkie_big_nohaplotig	exon	66807073	66807392	100	-	.	ID=ORF1368.mrna1.exon2;Name=ORF1368;Parent=ORF1368.mrna1;Target=ORF1368 806 1125 +
ChrX	stalkie_big_nohaplotig	CDS	66807456	66808260	99	-	0	ID=ORF1368.mrna1.cds1;Name=ORF1368;Parent=ORF1368.mrna1;Target=ORF1368 1 805 +
ChrX	stalkie_big_nohaplotig	CDS	66807073	66807392	100	-	1	ID=ORF1368.mrna1.cds2;Name=ORF1368;Parent=ORF1368.mrna1;Target=ORF1368 806 1125 +
Chr2	stalkie_big_nohaplotig	mRNA	9899824	9906979	.	+	.	ID=FBgn0050456.1.mrna1;Name=FBgn0050456.1;Parent=FBgn0050456.1.path1;Dir=sensecoverage=100.0;identity=99.2;matches=1572;mismatches=11;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	9899824	9900725	99	+	.	ID=FBgn0050456.1.mrna1.exon1;Name=FBgn0050456.1;Parent=FBgn0050456.1.mrna1;Target=FBgn0050456.1 1 902 +
Chr2	stalkie_big_nohaplotig	exon	9905473	9905565	96	+	.	ID=FBgn0050456.1.mrna1.exon2;Name=FBgn0050456.1;Parent=FBgn0050456.1.mrna1;Target=FBgn0050456.1 903 995 +
Chr2	stalkie_big_nohaplotig	exon	9906165	9906465	99	+	.	ID=FBgn0050456.1.mrna1.exon3;Name=FBgn0050456.1;Parent=FBgn0050456.1.mrna1;Target=FBgn0050456.1 996 1296 +
Chr2	stalkie_big_nohaplotig	exon	9906558	9906644	100	+	.	ID=FBgn0050456.1.mrna1.exon4;Name=FBgn0050456.1;Parent=FBgn0050456.1.mrna1;Target=FBgn0050456.1 1297 1383 +
Chr2	stalkie_big_nohaplotig	exon	9906708	9906812	98	+	.	ID=FBgn0050456.1.mrna1.exon5;Name=FBgn0050456.1;Parent=FBgn0050456.1.mrna1;Target=FBgn0050456.1 1384 1488 +
Chr2	stalkie_big_nohaplotig	exon	9906885	9906979	97	+	.	ID=FBgn0050456.1.mrna1.exon6;Name=FBgn0050456.1;Parent=FBgn0050456.1.mrna1;Target=FBgn0050456.1 1489 1584 +
Chr2	stalkie_big_nohaplotig	CDS	9899824	9900725	99	+	0	ID=FBgn0050456.1.mrna1.cds1;Name=FBgn0050456.1;Parent=FBgn0050456.1.mrna1;Target=FBgn0050456.1 1 902 +
Chr2	stalkie_big_nohaplotig	CDS	9905473	9905565	96	+	2	ID=FBgn0050456.1.mrna1.cds2;Name=FBgn0050456.1;Parent=FBgn0050456.1.mrna1;Target=FBgn0050456.1 903 995 +
Chr2	stalkie_big_nohaplotig	CDS	9906165	9906465	99	+	2	ID=FBgn0050456.1.mrna1.cds3;Name=FBgn0050456.1;Parent=FBgn0050456.1.mrna1;Target=FBgn0050456.1 996 1296 +
Chr2	stalkie_big_nohaplotig	CDS	9906558	9906644	100	+	0	ID=FBgn0050456.1.mrna1.cds4;Name=FBgn0050456.1;Parent=FBgn0050456.1.mrna1;Target=FBgn0050456.1 1297 1383 +
Chr2	stalkie_big_nohaplotig	CDS	9906708	9906812	98	+	0	ID=FBgn0050456.1.mrna1.cds5;Name=FBgn0050456.1;Parent=FBgn0050456.1.mrna1;Target=FBgn0050456.1 1384 1488 +
Chr2	stalkie_big_nohaplotig	CDS	9906885	9906979	97	+	0	ID=FBgn0050456.1.mrna1.cds6;Name=FBgn0050456.1;Parent=FBgn0050456.1.mrna1;Target=FBgn0050456.1 1489 1584 +
Chr2	stalkie_big_nohaplotig	mRNA	90211123	90215667	.	-	.	ID=ORF740.mrna1;Name=ORF740;Parent=ORF740.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1473;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	90215096	90215667	100	-	.	ID=ORF740.mrna1.exon1;Name=ORF740;Parent=ORF740.mrna1;Target=ORF740 1 572 +
Chr2	stalkie_big_nohaplotig	exon	90214834	90214992	100	-	.	ID=ORF740.mrna1.exon2;Name=ORF740;Parent=ORF740.mrna1;Target=ORF740 573 731 +
Chr2	stalkie_big_nohaplotig	exon	90211123	90211864	100	-	.	ID=ORF740.mrna1.exon3;Name=ORF740;Parent=ORF740.mrna1;Target=ORF740 732 1473 +
Chr2	stalkie_big_nohaplotig	CDS	90215096	90215667	100	-	0	ID=ORF740.mrna1.cds1;Name=ORF740;Parent=ORF740.mrna1;Target=ORF740 1 572 +
Chr2	stalkie_big_nohaplotig	CDS	90214834	90214992	100	-	2	ID=ORF740.mrna1.cds2;Name=ORF740;Parent=ORF740.mrna1;Target=ORF740 573 731 +
Chr2	stalkie_big_nohaplotig	CDS	90211123	90211864	100	-	2	ID=ORF740.mrna1.cds3;Name=ORF740;Parent=ORF740.mrna1;Target=ORF740 732 1473 +
Chr2	stalkie_big_nohaplotig	mRNA	90109395	90112186	.	-	.	ID=FBgn0038418.1.mrna1;Name=FBgn0038418.1;Parent=FBgn0038418.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2016;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	90112022	90112186	100	-	.	ID=FBgn0038418.1.mrna1.exon1;Name=FBgn0038418.1;Parent=FBgn0038418.1.mrna1;Target=FBgn0038418.1 1 165 +
Chr2	stalkie_big_nohaplotig	exon	90111616	90111951	100	-	.	ID=FBgn0038418.1.mrna1.exon2;Name=FBgn0038418.1;Parent=FBgn0038418.1.mrna1;Target=FBgn0038418.1 166 501 +
Chr2	stalkie_big_nohaplotig	exon	90110860	90111038	100	-	.	ID=FBgn0038418.1.mrna1.exon3;Name=FBgn0038418.1;Parent=FBgn0038418.1.mrna1;Target=FBgn0038418.1 502 680 +
Chr2	stalkie_big_nohaplotig	exon	90110033	90110798	100	-	.	ID=FBgn0038418.1.mrna1.exon4;Name=FBgn0038418.1;Parent=FBgn0038418.1.mrna1;Target=FBgn0038418.1 681 1446 +
Chr2	stalkie_big_nohaplotig	exon	90109395	90109964	100	-	.	ID=FBgn0038418.1.mrna1.exon5;Name=FBgn0038418.1;Parent=FBgn0038418.1.mrna1;Target=FBgn0038418.1 1447 2016 +
Chr2	stalkie_big_nohaplotig	CDS	90112022	90112186	100	-	0	ID=FBgn0038418.1.mrna1.cds1;Name=FBgn0038418.1;Parent=FBgn0038418.1.mrna1;Target=FBgn0038418.1 1 165 +
Chr2	stalkie_big_nohaplotig	CDS	90111616	90111951	100	-	0	ID=FBgn0038418.1.mrna1.cds2;Name=FBgn0038418.1;Parent=FBgn0038418.1.mrna1;Target=FBgn0038418.1 166 501 +
Chr2	stalkie_big_nohaplotig	CDS	90110860	90111038	100	-	0	ID=FBgn0038418.1.mrna1.cds3;Name=FBgn0038418.1;Parent=FBgn0038418.1.mrna1;Target=FBgn0038418.1 502 680 +
Chr2	stalkie_big_nohaplotig	CDS	90110033	90110798	100	-	2	ID=FBgn0038418.1.mrna1.cds4;Name=FBgn0038418.1;Parent=FBgn0038418.1.mrna1;Target=FBgn0038418.1 681 1446 +
Chr2	stalkie_big_nohaplotig	CDS	90109395	90109964	100	-	0	ID=FBgn0038418.1.mrna1.cds5;Name=FBgn0038418.1;Parent=FBgn0038418.1.mrna1;Target=FBgn0038418.1 1447 2016 +
Chr2	stalkie_big_nohaplotig	mRNA	38021370	38022275	.	-	.	ID=FBgn0036014.1.mrna1;Name=FBgn0036014.1;Parent=FBgn0036014.1.path1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=897;mismatches=9;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	38021370	38022275	99	-	.	ID=FBgn0036014.1.mrna1.exon1;Name=FBgn0036014.1;Parent=FBgn0036014.1.mrna1;Target=FBgn0036014.1 906 1 .
Chr2	stalkie_big_nohaplotig	CDS	38021370	38022275	99	-	0	ID=FBgn0036014.1.mrna1.cds1;Name=FBgn0036014.1;Parent=FBgn0036014.1.mrna1;Target=FBgn0036014.1 906 1 .
Chr2	stalkie_big_nohaplotig	mRNA	30143836	30149958	.	+	.	ID=FBgn0033302.2.mrna1;Name=FBgn0033302.2;Parent=FBgn0033302.2.path1;Dir=sensecoverage=99.9;identity=96.0;matches=1471;mismatches=61;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	30143836	30144796	96	+	.	ID=FBgn0033302.2.mrna1.exon1;Name=FBgn0033302.2;Parent=FBgn0033302.2.mrna1;Target=FBgn0033302.2 1 961 +
Chr2	stalkie_big_nohaplotig	exon	30149281	30149439	98	+	.	ID=FBgn0033302.2.mrna1.exon2;Name=FBgn0033302.2;Parent=FBgn0033302.2.mrna1;Target=FBgn0033302.2 962 1120 +
Chr2	stalkie_big_nohaplotig	exon	30149547	30149958	94	+	.	ID=FBgn0033302.2.mrna1.exon3;Name=FBgn0033302.2;Parent=FBgn0033302.2.mrna1;Target=FBgn0033302.2 1121 1532 +
Chr2	stalkie_big_nohaplotig	CDS	30143836	30144796	96	+	0	ID=FBgn0033302.2.mrna1.cds1;Name=FBgn0033302.2;Parent=FBgn0033302.2.mrna1;Target=FBgn0033302.2 1 961 +
Chr2	stalkie_big_nohaplotig	CDS	30149281	30149439	98	+	1	ID=FBgn0033302.2.mrna1.cds2;Name=FBgn0033302.2;Parent=FBgn0033302.2.mrna1;Target=FBgn0033302.2 962 1120 +
Chr2	stalkie_big_nohaplotig	CDS	30149547	30149956	94	+	1	ID=FBgn0033302.2.mrna1.cds3;Name=FBgn0033302.2;Parent=FBgn0033302.2.mrna1;Target=FBgn0033302.2 1121 1530 +
Chr1	stalkie_big_nohaplotig	mRNA	44916940	44917818	.	+	.	ID=FBgn0036014.3.mrna1;Name=FBgn0036014.3;Parent=FBgn0036014.3.path1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=871;mismatches=8;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	44916940	44917818	99	+	.	ID=FBgn0036014.3.mrna1.exon1;Name=FBgn0036014.3;Parent=FBgn0036014.3.mrna1;Target=FBgn0036014.3 879 1 .
Chr1	stalkie_big_nohaplotig	CDS	44916940	44917818	99	+	0	ID=FBgn0036014.3.mrna1.cds1;Name=FBgn0036014.3;Parent=FBgn0036014.3.mrna1;Target=FBgn0036014.3 879 1 .
Chr1	stalkie_big_nohaplotig	mRNA	162314129	162315879	.	-	.	ID=ORF592.mrna1;Name=ORF592;Parent=ORF592.path1;Dir=sensecoverage=100.0;identity=98.9;matches=1614;mismatches=18;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	162314733	162315879	99	-	.	ID=ORF592.mrna1.exon1;Name=ORF592;Parent=ORF592.mrna1;Target=ORF592 1 1147 +
Chr1	stalkie_big_nohaplotig	exon	162314471	162314674	98	-	.	ID=ORF592.mrna1.exon2;Name=ORF592;Parent=ORF592.mrna1;Target=ORF592 1148 1351 +
Chr1	stalkie_big_nohaplotig	exon	162314129	162314409	98	-	.	ID=ORF592.mrna1.exon3;Name=ORF592;Parent=ORF592.mrna1;Target=ORF592 1352 1632 +
Chr1	stalkie_big_nohaplotig	CDS	162314733	162315879	99	-	0	ID=ORF592.mrna1.cds1;Name=ORF592;Parent=ORF592.mrna1;Target=ORF592 1 1147 +
Chr1	stalkie_big_nohaplotig	CDS	162314471	162314674	98	-	1	ID=ORF592.mrna1.cds2;Name=ORF592;Parent=ORF592.mrna1;Target=ORF592 1148 1351 +
Chr1	stalkie_big_nohaplotig	CDS	162314129	162314409	98	-	1	ID=ORF592.mrna1.cds3;Name=ORF592;Parent=ORF592.mrna1;Target=ORF592 1352 1632 +
Chr2	stalkie_big_nohaplotig	mRNA	40726529	40728340	.	+	.	ID=ORF443.mrna1;Name=ORF443;Parent=ORF443.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1810;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	40726529	40728340	99	+	.	ID=ORF443.mrna1.exon1;Name=ORF443;Parent=ORF443.mrna1;Target=ORF443 1812 1 .
Chr2	stalkie_big_nohaplotig	CDS	40726529	40728340	99	+	0	ID=ORF443.mrna1.cds1;Name=ORF443;Parent=ORF443.mrna1;Target=ORF443 1812 1 .
Chr2	stalkie_big_nohaplotig	mRNA	40733270	40734669	.	+	.	ID=ORF950.mrna1;Name=ORF950;Parent=ORF950.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1324;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	40733270	40733774	99	+	.	ID=ORF950.mrna1.exon1;Name=ORF950;Parent=ORF950.mrna1;Target=ORF950 1 505 +
Chr2	stalkie_big_nohaplotig	exon	40733846	40734669	100	+	.	ID=ORF950.mrna1.exon2;Name=ORF950;Parent=ORF950.mrna1;Target=ORF950 506 1329 +
Chr2	stalkie_big_nohaplotig	CDS	40733270	40733774	99	+	0	ID=ORF950.mrna1.cds1;Name=ORF950;Parent=ORF950.mrna1;Target=ORF950 1 505 +
Chr2	stalkie_big_nohaplotig	CDS	40733846	40734669	100	+	1	ID=ORF950.mrna1.cds2;Name=ORF950;Parent=ORF950.mrna1;Target=ORF950 506 1329 +
Chr1	stalkie_big_nohaplotig	mRNA	136392688	136393513	.	-	.	ID=FBgn0032248.5.mrna1;Name=FBgn0032248.5;Parent=FBgn0032248.5.path1;Dir=sensecoverage=100.0;identity=99.2;matches=658;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	136393217	136393513	98	-	.	ID=FBgn0032248.5.mrna1.exon1;Name=FBgn0032248.5;Parent=FBgn0032248.5.mrna1;Target=FBgn0032248.5 1 297 +
Chr1	stalkie_big_nohaplotig	exon	136392688	136393053	99	-	.	ID=FBgn0032248.5.mrna1.exon2;Name=FBgn0032248.5;Parent=FBgn0032248.5.mrna1;Target=FBgn0032248.5 298 663 +
Chr1	stalkie_big_nohaplotig	CDS	136393217	136393513	98	-	0	ID=FBgn0032248.5.mrna1.cds1;Name=FBgn0032248.5;Parent=FBgn0032248.5.mrna1;Target=FBgn0032248.5 1 297 +
Chr1	stalkie_big_nohaplotig	CDS	136392688	136393053	99	-	0	ID=FBgn0032248.5.mrna1.cds2;Name=FBgn0032248.5;Parent=FBgn0032248.5.mrna1;Target=FBgn0032248.5 298 663 +
Chr2	stalkie_big_nohaplotig	mRNA	12845716	12848164	.	-	.	ID=FBgn0033050.1.mrna1;Name=FBgn0033050.1;Parent=FBgn0033050.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=1965;mismatches=9;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	12847738	12848164	99	-	.	ID=FBgn0033050.1.mrna1.exon1;Name=FBgn0033050.1;Parent=FBgn0033050.1.mrna1;Target=FBgn0033050.1 1 427 +
Chr2	stalkie_big_nohaplotig	exon	12847555	12847676	98	-	.	ID=FBgn0033050.1.mrna1.exon2;Name=FBgn0033050.1;Parent=FBgn0033050.1.mrna1;Target=FBgn0033050.1 428 549 +
Chr2	stalkie_big_nohaplotig	exon	12846976	12847488	99	-	.	ID=FBgn0033050.1.mrna1.exon3;Name=FBgn0033050.1;Parent=FBgn0033050.1.mrna1;Target=FBgn0033050.1 550 1062 +
Chr2	stalkie_big_nohaplotig	exon	12846599	12846921	99	-	.	ID=FBgn0033050.1.mrna1.exon4;Name=FBgn0033050.1;Parent=FBgn0033050.1.mrna1;Target=FBgn0033050.1 1063 1385 +
Chr2	stalkie_big_nohaplotig	exon	12846445	12846529	100	-	.	ID=FBgn0033050.1.mrna1.exon5;Name=FBgn0033050.1;Parent=FBgn0033050.1.mrna1;Target=FBgn0033050.1 1386 1470 +
Chr2	stalkie_big_nohaplotig	exon	12846285	12846381	98	-	.	ID=FBgn0033050.1.mrna1.exon6;Name=FBgn0033050.1;Parent=FBgn0033050.1.mrna1;Target=FBgn0033050.1 1471 1567 +
Chr2	stalkie_big_nohaplotig	exon	12846070	12846189	100	-	.	ID=FBgn0033050.1.mrna1.exon7;Name=FBgn0033050.1;Parent=FBgn0033050.1.mrna1;Target=FBgn0033050.1 1568 1687 +
Chr2	stalkie_big_nohaplotig	exon	12845716	12846002	99	-	.	ID=FBgn0033050.1.mrna1.exon8;Name=FBgn0033050.1;Parent=FBgn0033050.1.mrna1;Target=FBgn0033050.1 1688 1974 +
Chr2	stalkie_big_nohaplotig	CDS	12847738	12848164	99	-	0	ID=FBgn0033050.1.mrna1.cds1;Name=FBgn0033050.1;Parent=FBgn0033050.1.mrna1;Target=FBgn0033050.1 1 427 +
Chr2	stalkie_big_nohaplotig	CDS	12847555	12847676	98	-	1	ID=FBgn0033050.1.mrna1.cds2;Name=FBgn0033050.1;Parent=FBgn0033050.1.mrna1;Target=FBgn0033050.1 428 549 +
Chr2	stalkie_big_nohaplotig	CDS	12846976	12847488	99	-	0	ID=FBgn0033050.1.mrna1.cds3;Name=FBgn0033050.1;Parent=FBgn0033050.1.mrna1;Target=FBgn0033050.1 550 1062 +
Chr2	stalkie_big_nohaplotig	CDS	12846599	12846921	99	-	0	ID=FBgn0033050.1.mrna1.cds4;Name=FBgn0033050.1;Parent=FBgn0033050.1.mrna1;Target=FBgn0033050.1 1063 1385 +
Chr2	stalkie_big_nohaplotig	CDS	12846445	12846529	100	-	2	ID=FBgn0033050.1.mrna1.cds5;Name=FBgn0033050.1;Parent=FBgn0033050.1.mrna1;Target=FBgn0033050.1 1386 1470 +
Chr2	stalkie_big_nohaplotig	CDS	12846285	12846381	98	-	0	ID=FBgn0033050.1.mrna1.cds6;Name=FBgn0033050.1;Parent=FBgn0033050.1.mrna1;Target=FBgn0033050.1 1471 1567 +
Chr2	stalkie_big_nohaplotig	CDS	12846070	12846189	100	-	1	ID=FBgn0033050.1.mrna1.cds7;Name=FBgn0033050.1;Parent=FBgn0033050.1.mrna1;Target=FBgn0033050.1 1568 1687 +
Chr2	stalkie_big_nohaplotig	CDS	12845716	12846002	99	-	1	ID=FBgn0033050.1.mrna1.cds8;Name=FBgn0033050.1;Parent=FBgn0033050.1.mrna1;Target=FBgn0033050.1 1688 1974 +
Chr2	stalkie_big_nohaplotig	mRNA	155178129	155189117	.	-	.	ID=FBgn0039852.1.mrna1;Name=FBgn0039852.1;Parent=FBgn0039852.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=2532;mismatches=12;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	155188585	155189117	99	-	.	ID=FBgn0039852.1.mrna1.exon1;Name=FBgn0039852.1;Parent=FBgn0039852.1.mrna1;Target=FBgn0039852.1 1 533 +
Chr2	stalkie_big_nohaplotig	exon	155185328	155185488	100	-	.	ID=FBgn0039852.1.mrna1.exon2;Name=FBgn0039852.1;Parent=FBgn0039852.1.mrna1;Target=FBgn0039852.1 534 694 +
Chr2	stalkie_big_nohaplotig	exon	155183840	155184041	100	-	.	ID=FBgn0039852.1.mrna1.exon3;Name=FBgn0039852.1;Parent=FBgn0039852.1.mrna1;Target=FBgn0039852.1 695 896 +
Chr2	stalkie_big_nohaplotig	exon	155183266	155183517	98	-	.	ID=FBgn0039852.1.mrna1.exon4;Name=FBgn0039852.1;Parent=FBgn0039852.1.mrna1;Target=FBgn0039852.1 897 1148 +
Chr2	stalkie_big_nohaplotig	exon	155182222	155183165	99	-	.	ID=FBgn0039852.1.mrna1.exon5;Name=FBgn0039852.1;Parent=FBgn0039852.1.mrna1;Target=FBgn0039852.1 1149 2092 +
Chr2	stalkie_big_nohaplotig	exon	155181931	155182143	99	-	.	ID=FBgn0039852.1.mrna1.exon6;Name=FBgn0039852.1;Parent=FBgn0039852.1.mrna1;Target=FBgn0039852.1 2093 2305 +
Chr2	stalkie_big_nohaplotig	exon	155178129	155178367	100	-	.	ID=FBgn0039852.1.mrna1.exon7;Name=FBgn0039852.1;Parent=FBgn0039852.1.mrna1;Target=FBgn0039852.1 2306 2544 +
Chr2	stalkie_big_nohaplotig	CDS	155188585	155189117	99	-	0	ID=FBgn0039852.1.mrna1.cds1;Name=FBgn0039852.1;Parent=FBgn0039852.1.mrna1;Target=FBgn0039852.1 1 533 +
Chr2	stalkie_big_nohaplotig	CDS	155185328	155185488	100	-	2	ID=FBgn0039852.1.mrna1.cds2;Name=FBgn0039852.1;Parent=FBgn0039852.1.mrna1;Target=FBgn0039852.1 534 694 +
Chr2	stalkie_big_nohaplotig	CDS	155183840	155184041	100	-	1	ID=FBgn0039852.1.mrna1.cds3;Name=FBgn0039852.1;Parent=FBgn0039852.1.mrna1;Target=FBgn0039852.1 695 896 +
Chr2	stalkie_big_nohaplotig	CDS	155183266	155183517	98	-	2	ID=FBgn0039852.1.mrna1.cds4;Name=FBgn0039852.1;Parent=FBgn0039852.1.mrna1;Target=FBgn0039852.1 897 1148 +
Chr2	stalkie_big_nohaplotig	CDS	155182222	155183165	99	-	2	ID=FBgn0039852.1.mrna1.cds5;Name=FBgn0039852.1;Parent=FBgn0039852.1.mrna1;Target=FBgn0039852.1 1149 2092 +
Chr2	stalkie_big_nohaplotig	CDS	155181931	155182143	99	-	1	ID=FBgn0039852.1.mrna1.cds6;Name=FBgn0039852.1;Parent=FBgn0039852.1.mrna1;Target=FBgn0039852.1 2093 2305 +
Chr2	stalkie_big_nohaplotig	CDS	155178129	155178367	100	-	1	ID=FBgn0039852.1.mrna1.cds7;Name=FBgn0039852.1;Parent=FBgn0039852.1.mrna1;Target=FBgn0039852.1 2306 2544 +
Chr2	stalkie_big_nohaplotig	mRNA	37832317	37864219	.	-	.	ID=FBgn0053519.1.mrna1;Name=FBgn0053519.1;Parent=FBgn0053519.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=10416;mismatches=10;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	37864199	37864219	100	-	.	ID=FBgn0053519.1.mrna1.exon1;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 1 21 +
Chr2	stalkie_big_nohaplotig	exon	37861551	37861669	100	-	.	ID=FBgn0053519.1.mrna1.exon2;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 22 140 +
Chr2	stalkie_big_nohaplotig	exon	37861456	37861491	100	-	.	ID=FBgn0053519.1.mrna1.exon3;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 141 176 +
Chr2	stalkie_big_nohaplotig	exon	37861262	37861390	100	-	.	ID=FBgn0053519.1.mrna1.exon4;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 177 305 +
Chr2	stalkie_big_nohaplotig	exon	37861036	37861206	100	-	.	ID=FBgn0053519.1.mrna1.exon5;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 306 476 +
Chr2	stalkie_big_nohaplotig	exon	37860806	37860971	100	-	.	ID=FBgn0053519.1.mrna1.exon6;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 477 642 +
Chr2	stalkie_big_nohaplotig	exon	37852923	37853015	100	-	.	ID=FBgn0053519.1.mrna1.exon7;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 643 735 +
Chr2	stalkie_big_nohaplotig	exon	37851158	37852265	99	-	.	ID=FBgn0053519.1.mrna1.exon8;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 736 1843 +
Chr2	stalkie_big_nohaplotig	exon	37846744	37846899	98	-	.	ID=FBgn0053519.1.mrna1.exon9;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 1844 1999 +
Chr2	stalkie_big_nohaplotig	exon	37846322	37846478	99	-	.	ID=FBgn0053519.1.mrna1.exon10;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 2000 2156 +
Chr2	stalkie_big_nohaplotig	exon	37846180	37846265	100	-	.	ID=FBgn0053519.1.mrna1.exon11;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 2157 2242 +
Chr2	stalkie_big_nohaplotig	exon	37845984	37846119	100	-	.	ID=FBgn0053519.1.mrna1.exon12;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 2243 2378 +
Chr2	stalkie_big_nohaplotig	exon	37844957	37845141	100	-	.	ID=FBgn0053519.1.mrna1.exon13;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 2379 2563 +
Chr2	stalkie_big_nohaplotig	exon	37844266	37844826	100	-	.	ID=FBgn0053519.1.mrna1.exon14;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 2564 3124 +
Chr2	stalkie_big_nohaplotig	exon	37843345	37844205	99	-	.	ID=FBgn0053519.1.mrna1.exon15;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 3125 3985 +
Chr2	stalkie_big_nohaplotig	exon	37842721	37842826	100	-	.	ID=FBgn0053519.1.mrna1.exon16;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 3986 4091 +
Chr2	stalkie_big_nohaplotig	exon	37842455	37842636	100	-	.	ID=FBgn0053519.1.mrna1.exon17;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 4092 4273 +
Chr2	stalkie_big_nohaplotig	exon	37840115	37840281	100	-	.	ID=FBgn0053519.1.mrna1.exon18;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 4274 4440 +
Chr2	stalkie_big_nohaplotig	exon	37839935	37840049	100	-	.	ID=FBgn0053519.1.mrna1.exon19;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 4441 4555 +
Chr2	stalkie_big_nohaplotig	exon	37839643	37839876	100	-	.	ID=FBgn0053519.1.mrna1.exon20;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 4556 4789 +
Chr2	stalkie_big_nohaplotig	exon	37838670	37839038	100	-	.	ID=FBgn0053519.1.mrna1.exon21;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 4790 5158 +
Chr2	stalkie_big_nohaplotig	exon	37838358	37838614	99	-	.	ID=FBgn0053519.1.mrna1.exon22;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 5159 5415 +
Chr2	stalkie_big_nohaplotig	exon	37838092	37838303	100	-	.	ID=FBgn0053519.1.mrna1.exon23;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 5416 5627 +
Chr2	stalkie_big_nohaplotig	exon	37837802	37837938	100	-	.	ID=FBgn0053519.1.mrna1.exon24;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 5628 5764 +
Chr2	stalkie_big_nohaplotig	exon	37837538	37837733	100	-	.	ID=FBgn0053519.1.mrna1.exon25;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 5765 5960 +
Chr2	stalkie_big_nohaplotig	exon	37836476	37837468	100	-	.	ID=FBgn0053519.1.mrna1.exon26;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 5961 6953 +
Chr2	stalkie_big_nohaplotig	exon	37836117	37836418	100	-	.	ID=FBgn0053519.1.mrna1.exon27;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 6954 7255 +
Chr2	stalkie_big_nohaplotig	exon	37835781	37835962	100	-	.	ID=FBgn0053519.1.mrna1.exon28;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 7256 7437 +
Chr2	stalkie_big_nohaplotig	exon	37835555	37835724	99	-	.	ID=FBgn0053519.1.mrna1.exon29;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 7438 7607 +
Chr2	stalkie_big_nohaplotig	exon	37835365	37835505	100	-	.	ID=FBgn0053519.1.mrna1.exon30;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 7608 7748 +
Chr2	stalkie_big_nohaplotig	exon	37835115	37835300	100	-	.	ID=FBgn0053519.1.mrna1.exon31;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 7749 7934 +
Chr2	stalkie_big_nohaplotig	exon	37834823	37835060	100	-	.	ID=FBgn0053519.1.mrna1.exon32;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 7935 8172 +
Chr2	stalkie_big_nohaplotig	exon	37834177	37834758	100	-	.	ID=FBgn0053519.1.mrna1.exon33;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 8173 8754 +
Chr2	stalkie_big_nohaplotig	exon	37833405	37834102	99	-	.	ID=FBgn0053519.1.mrna1.exon34;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 8755 9452 +
Chr2	stalkie_big_nohaplotig	exon	37833216	37833348	100	-	.	ID=FBgn0053519.1.mrna1.exon35;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 9453 9585 +
Chr2	stalkie_big_nohaplotig	exon	37832317	37833157	99	-	.	ID=FBgn0053519.1.mrna1.exon36;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 9586 10426 +
Chr2	stalkie_big_nohaplotig	CDS	37864199	37864219	100	-	0	ID=FBgn0053519.1.mrna1.cds1;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	37861551	37861669	100	-	0	ID=FBgn0053519.1.mrna1.cds2;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 22 140 +
Chr2	stalkie_big_nohaplotig	CDS	37861456	37861491	100	-	2	ID=FBgn0053519.1.mrna1.cds3;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 141 176 +
Chr2	stalkie_big_nohaplotig	CDS	37861262	37861390	100	-	2	ID=FBgn0053519.1.mrna1.cds4;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 177 305 +
Chr2	stalkie_big_nohaplotig	CDS	37861036	37861206	100	-	2	ID=FBgn0053519.1.mrna1.cds5;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 306 476 +
Chr2	stalkie_big_nohaplotig	CDS	37860806	37860971	100	-	2	ID=FBgn0053519.1.mrna1.cds6;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 477 642 +
Chr2	stalkie_big_nohaplotig	CDS	37852923	37853015	100	-	0	ID=FBgn0053519.1.mrna1.cds7;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 643 735 +
Chr2	stalkie_big_nohaplotig	CDS	37851158	37852265	99	-	0	ID=FBgn0053519.1.mrna1.cds8;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 736 1843 +
Chr2	stalkie_big_nohaplotig	CDS	37846744	37846899	98	-	1	ID=FBgn0053519.1.mrna1.cds9;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 1844 1999 +
Chr2	stalkie_big_nohaplotig	CDS	37846322	37846478	99	-	1	ID=FBgn0053519.1.mrna1.cds10;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 2000 2156 +
Chr2	stalkie_big_nohaplotig	CDS	37846180	37846265	100	-	2	ID=FBgn0053519.1.mrna1.cds11;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 2157 2242 +
Chr2	stalkie_big_nohaplotig	CDS	37845984	37846119	100	-	1	ID=FBgn0053519.1.mrna1.cds12;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 2243 2378 +
Chr2	stalkie_big_nohaplotig	CDS	37844957	37845141	100	-	2	ID=FBgn0053519.1.mrna1.cds13;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 2379 2563 +
Chr2	stalkie_big_nohaplotig	CDS	37844266	37844826	100	-	1	ID=FBgn0053519.1.mrna1.cds14;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 2564 3124 +
Chr2	stalkie_big_nohaplotig	CDS	37843345	37844205	99	-	1	ID=FBgn0053519.1.mrna1.cds15;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 3125 3985 +
Chr2	stalkie_big_nohaplotig	CDS	37842721	37842826	100	-	1	ID=FBgn0053519.1.mrna1.cds16;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 3986 4091 +
Chr2	stalkie_big_nohaplotig	CDS	37842455	37842636	100	-	2	ID=FBgn0053519.1.mrna1.cds17;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 4092 4273 +
Chr2	stalkie_big_nohaplotig	CDS	37840115	37840281	100	-	1	ID=FBgn0053519.1.mrna1.cds18;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 4274 4440 +
Chr2	stalkie_big_nohaplotig	CDS	37839935	37840049	100	-	0	ID=FBgn0053519.1.mrna1.cds19;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 4441 4555 +
Chr2	stalkie_big_nohaplotig	CDS	37839643	37839876	100	-	1	ID=FBgn0053519.1.mrna1.cds20;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 4556 4789 +
Chr2	stalkie_big_nohaplotig	CDS	37838670	37839038	100	-	1	ID=FBgn0053519.1.mrna1.cds21;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 4790 5158 +
Chr2	stalkie_big_nohaplotig	CDS	37838358	37838614	99	-	1	ID=FBgn0053519.1.mrna1.cds22;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 5159 5415 +
Chr2	stalkie_big_nohaplotig	CDS	37838092	37838303	100	-	0	ID=FBgn0053519.1.mrna1.cds23;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 5416 5627 +
Chr2	stalkie_big_nohaplotig	CDS	37837802	37837938	100	-	2	ID=FBgn0053519.1.mrna1.cds24;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 5628 5764 +
Chr2	stalkie_big_nohaplotig	CDS	37837538	37837733	100	-	1	ID=FBgn0053519.1.mrna1.cds25;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 5765 5960 +
Chr2	stalkie_big_nohaplotig	CDS	37836476	37837468	100	-	2	ID=FBgn0053519.1.mrna1.cds26;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 5961 6953 +
Chr2	stalkie_big_nohaplotig	CDS	37836117	37836418	100	-	2	ID=FBgn0053519.1.mrna1.cds27;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 6954 7255 +
Chr2	stalkie_big_nohaplotig	CDS	37835781	37835962	100	-	1	ID=FBgn0053519.1.mrna1.cds28;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 7256 7437 +
Chr2	stalkie_big_nohaplotig	CDS	37835555	37835724	99	-	0	ID=FBgn0053519.1.mrna1.cds29;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 7438 7607 +
Chr2	stalkie_big_nohaplotig	CDS	37835365	37835505	100	-	2	ID=FBgn0053519.1.mrna1.cds30;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 7608 7748 +
Chr2	stalkie_big_nohaplotig	CDS	37835115	37835300	100	-	2	ID=FBgn0053519.1.mrna1.cds31;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 7749 7934 +
Chr2	stalkie_big_nohaplotig	CDS	37834823	37835060	100	-	2	ID=FBgn0053519.1.mrna1.cds32;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 7935 8172 +
Chr2	stalkie_big_nohaplotig	CDS	37834177	37834758	100	-	0	ID=FBgn0053519.1.mrna1.cds33;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 8173 8754 +
Chr2	stalkie_big_nohaplotig	CDS	37833405	37834102	99	-	0	ID=FBgn0053519.1.mrna1.cds34;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 8755 9452 +
Chr2	stalkie_big_nohaplotig	CDS	37833216	37833348	100	-	2	ID=FBgn0053519.1.mrna1.cds35;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 9453 9585 +
Chr2	stalkie_big_nohaplotig	CDS	37832318	37833157	99	-	0	ID=FBgn0053519.1.mrna1.cds36;Name=FBgn0053519.1;Parent=FBgn0053519.1.mrna1;Target=FBgn0053519.1 9586 10425 +
Chr1	stalkie_big_nohaplotig	mRNA	131890056	131899003	.	+	.	ID=FBgn0029723.1.mrna1;Name=FBgn0029723.1;Parent=FBgn0029723.1.path1;Dir=sensecoverage=100.0;identity=99.2;matches=1661;mismatches=5;indels=8;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	131890056	131890268	95	+	.	ID=FBgn0029723.1.mrna1.exon1;Name=FBgn0029723.1;Parent=FBgn0029723.1.mrna1;Target=FBgn0029723.1 1 215 +
Chr1	stalkie_big_nohaplotig	exon	131892180	131892349	100	+	.	ID=FBgn0029723.1.mrna1.exon2;Name=FBgn0029723.1;Parent=FBgn0029723.1.mrna1;Target=FBgn0029723.1 216 385 +
Chr1	stalkie_big_nohaplotig	exon	131895123	131895239	100	+	.	ID=FBgn0029723.1.mrna1.exon3;Name=FBgn0029723.1;Parent=FBgn0029723.1.mrna1;Target=FBgn0029723.1 386 502 +
Chr1	stalkie_big_nohaplotig	exon	131895401	131895718	99	+	.	ID=FBgn0029723.1.mrna1.exon4;Name=FBgn0029723.1;Parent=FBgn0029723.1.mrna1;Target=FBgn0029723.1 503 820 +
Chr1	stalkie_big_nohaplotig	exon	131896108	131896370	99	+	.	ID=FBgn0029723.1.mrna1.exon5;Name=FBgn0029723.1;Parent=FBgn0029723.1.mrna1;Target=FBgn0029723.1 821 1083 +
Chr1	stalkie_big_nohaplotig	exon	131896587	131896790	100	+	.	ID=FBgn0029723.1.mrna1.exon6;Name=FBgn0029723.1;Parent=FBgn0029723.1.mrna1;Target=FBgn0029723.1 1084 1287 +
Chr1	stalkie_big_nohaplotig	exon	131898620	131899003	99	+	.	ID=FBgn0029723.1.mrna1.exon7;Name=FBgn0029723.1;Parent=FBgn0029723.1.mrna1;Target=FBgn0029723.1 1288 1671 +
Chr1	stalkie_big_nohaplotig	CDS	131890153	131890268	100	+	0	ID=FBgn0029723.1.mrna1.cds1;Name=FBgn0029723.1;Parent=FBgn0029723.1.mrna1;Target=FBgn0029723.1 100 215 +
Chr1	stalkie_big_nohaplotig	CDS	131892180	131892349	100	+	2	ID=FBgn0029723.1.mrna1.cds2;Name=FBgn0029723.1;Parent=FBgn0029723.1.mrna1;Target=FBgn0029723.1 216 385 +
Chr1	stalkie_big_nohaplotig	CDS	131895123	131895239	100	+	1	ID=FBgn0029723.1.mrna1.cds3;Name=FBgn0029723.1;Parent=FBgn0029723.1.mrna1;Target=FBgn0029723.1 386 502 +
Chr1	stalkie_big_nohaplotig	CDS	131895401	131895718	99	+	1	ID=FBgn0029723.1.mrna1.cds4;Name=FBgn0029723.1;Parent=FBgn0029723.1.mrna1;Target=FBgn0029723.1 503 820 +
Chr1	stalkie_big_nohaplotig	CDS	131896108	131896370	99	+	1	ID=FBgn0029723.1.mrna1.cds5;Name=FBgn0029723.1;Parent=FBgn0029723.1.mrna1;Target=FBgn0029723.1 821 1083 +
Chr1	stalkie_big_nohaplotig	CDS	131896587	131896790	100	+	0	ID=FBgn0029723.1.mrna1.cds6;Name=FBgn0029723.1;Parent=FBgn0029723.1.mrna1;Target=FBgn0029723.1 1084 1287 +
Chr1	stalkie_big_nohaplotig	CDS	131898620	131899003	99	+	0	ID=FBgn0029723.1.mrna1.cds7;Name=FBgn0029723.1;Parent=FBgn0029723.1.mrna1;Target=FBgn0029723.1 1288 1671 +
ChrX	stalkie_big_nohaplotig	mRNA	85716931	85723131	.	-	.	ID=FBgn0032100.1.mrna1;Name=FBgn0032100.1;Parent=FBgn0032100.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1164;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	85722472	85723131	100	-	.	ID=FBgn0032100.1.mrna1.exon1;Name=FBgn0032100.1;Parent=FBgn0032100.1.mrna1;Target=FBgn0032100.1 1 660 +
ChrX	stalkie_big_nohaplotig	exon	85716931	85717434	100	-	.	ID=FBgn0032100.1.mrna1.exon2;Name=FBgn0032100.1;Parent=FBgn0032100.1.mrna1;Target=FBgn0032100.1 661 1164 +
ChrX	stalkie_big_nohaplotig	CDS	85722472	85723131	100	-	0	ID=FBgn0032100.1.mrna1.cds1;Name=FBgn0032100.1;Parent=FBgn0032100.1.mrna1;Target=FBgn0032100.1 1 660 +
ChrX	stalkie_big_nohaplotig	CDS	85716931	85717434	100	-	0	ID=FBgn0032100.1.mrna1.cds2;Name=FBgn0032100.1;Parent=FBgn0032100.1.mrna1;Target=FBgn0032100.1 661 1164 +
ChrX	stalkie_big_nohaplotig	mRNA	85682557	85690852	.	+	.	ID=FBgn0032101.1.mrna1;Name=FBgn0032101.1;Parent=FBgn0032101.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=480;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	85682557	85682568	100	+	.	ID=FBgn0032101.1.mrna1.exon1;Name=FBgn0032101.1;Parent=FBgn0032101.1.mrna1;Target=FBgn0032101.1 1 12 +
ChrX	stalkie_big_nohaplotig	exon	85682625	85682837	100	+	.	ID=FBgn0032101.1.mrna1.exon2;Name=FBgn0032101.1;Parent=FBgn0032101.1.mrna1;Target=FBgn0032101.1 13 225 +
ChrX	stalkie_big_nohaplotig	exon	85690598	85690852	100	+	.	ID=FBgn0032101.1.mrna1.exon3;Name=FBgn0032101.1;Parent=FBgn0032101.1.mrna1;Target=FBgn0032101.1 226 480 +
ChrX	stalkie_big_nohaplotig	CDS	85682557	85682568	100	+	0	ID=FBgn0032101.1.mrna1.cds1;Name=FBgn0032101.1;Parent=FBgn0032101.1.mrna1;Target=FBgn0032101.1 1 12 +
ChrX	stalkie_big_nohaplotig	CDS	85682625	85682837	100	+	0	ID=FBgn0032101.1.mrna1.cds2;Name=FBgn0032101.1;Parent=FBgn0032101.1.mrna1;Target=FBgn0032101.1 13 225 +
ChrX	stalkie_big_nohaplotig	CDS	85690598	85690852	100	+	0	ID=FBgn0032101.1.mrna1.cds3;Name=FBgn0032101.1;Parent=FBgn0032101.1.mrna1;Target=FBgn0032101.1 226 480 +
ChrX	stalkie_big_nohaplotig	mRNA	85738838	85869437	.	-	.	ID=FBgn0052982.1.mrna1;Name=FBgn0052982.1;Parent=FBgn0052982.1.path1;Dir=sensecoverage=99.6;identity=100.0;matches=1996;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	85869243	85869437	100	-	.	ID=FBgn0052982.1.mrna1.exon1;Name=FBgn0052982.1;Parent=FBgn0052982.1.mrna1;Target=FBgn0052982.1 1 195 +
ChrX	stalkie_big_nohaplotig	exon	85850037	85850240	100	-	.	ID=FBgn0052982.1.mrna1.exon2;Name=FBgn0052982.1;Parent=FBgn0052982.1.mrna1;Target=FBgn0052982.1 196 399 +
ChrX	stalkie_big_nohaplotig	exon	85776899	85777005	100	-	.	ID=FBgn0052982.1.mrna1.exon3;Name=FBgn0052982.1;Parent=FBgn0052982.1.mrna1;Target=FBgn0052982.1 400 506 +
ChrX	stalkie_big_nohaplotig	exon	85765803	85765899	100	-	.	ID=FBgn0052982.1.mrna1.exon4;Name=FBgn0052982.1;Parent=FBgn0052982.1.mrna1;Target=FBgn0052982.1 507 603 +
ChrX	stalkie_big_nohaplotig	exon	85740446	85740583	100	-	.	ID=FBgn0052982.1.mrna1.exon5;Name=FBgn0052982.1;Parent=FBgn0052982.1.mrna1;Target=FBgn0052982.1 604 741 +
ChrX	stalkie_big_nohaplotig	exon	85739575	85740196	100	-	.	ID=FBgn0052982.1.mrna1.exon6;Name=FBgn0052982.1;Parent=FBgn0052982.1.mrna1;Target=FBgn0052982.1 742 1363 +
ChrX	stalkie_big_nohaplotig	exon	85738838	85739470	100	-	.	ID=FBgn0052982.1.mrna1.exon7;Name=FBgn0052982.1;Parent=FBgn0052982.1.mrna1;Target=FBgn0052982.1 1364 1996 +
ChrX	stalkie_big_nohaplotig	CDS	85869243	85869437	100	-	0	ID=FBgn0052982.1.mrna1.cds1;Name=FBgn0052982.1;Parent=FBgn0052982.1.mrna1;Target=FBgn0052982.1 1 195 +
ChrX	stalkie_big_nohaplotig	CDS	85850037	85850240	100	-	0	ID=FBgn0052982.1.mrna1.cds2;Name=FBgn0052982.1;Parent=FBgn0052982.1.mrna1;Target=FBgn0052982.1 196 399 +
ChrX	stalkie_big_nohaplotig	CDS	85776899	85777005	100	-	0	ID=FBgn0052982.1.mrna1.cds3;Name=FBgn0052982.1;Parent=FBgn0052982.1.mrna1;Target=FBgn0052982.1 400 506 +
ChrX	stalkie_big_nohaplotig	CDS	85765803	85765899	100	-	2	ID=FBgn0052982.1.mrna1.cds4;Name=FBgn0052982.1;Parent=FBgn0052982.1.mrna1;Target=FBgn0052982.1 507 603 +
ChrX	stalkie_big_nohaplotig	CDS	85740446	85740583	100	-	0	ID=FBgn0052982.1.mrna1.cds5;Name=FBgn0052982.1;Parent=FBgn0052982.1.mrna1;Target=FBgn0052982.1 604 741 +
ChrX	stalkie_big_nohaplotig	CDS	85739575	85740196	100	-	0	ID=FBgn0052982.1.mrna1.cds6;Name=FBgn0052982.1;Parent=FBgn0052982.1.mrna1;Target=FBgn0052982.1 742 1363 +
ChrX	stalkie_big_nohaplotig	CDS	85738839	85739470	100	-	1	ID=FBgn0052982.1.mrna1.cds7;Name=FBgn0052982.1;Parent=FBgn0052982.1.mrna1;Target=FBgn0052982.1 1364 1995 +
Chr1	stalkie_big_nohaplotig	mRNA	2103418	2105981	.	+	.	ID=FBgn0035699.1.mrna1;Name=FBgn0035699.1;Parent=FBgn0035699.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1036;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	2103418	2104036	99	+	.	ID=FBgn0035699.1.mrna1.exon1;Name=FBgn0035699.1;Parent=FBgn0035699.1.mrna1;Target=FBgn0035699.1 1 619 +
Chr1	stalkie_big_nohaplotig	exon	2104249	2104351	100	+	.	ID=FBgn0035699.1.mrna1.exon2;Name=FBgn0035699.1;Parent=FBgn0035699.1.mrna1;Target=FBgn0035699.1 620 722 +
Chr1	stalkie_big_nohaplotig	exon	2104988	2105013	100	+	.	ID=FBgn0035699.1.mrna1.exon3;Name=FBgn0035699.1;Parent=FBgn0035699.1.mrna1;Target=FBgn0035699.1 723 748 +
Chr1	stalkie_big_nohaplotig	exon	2105692	2105981	99	+	.	ID=FBgn0035699.1.mrna1.exon4;Name=FBgn0035699.1;Parent=FBgn0035699.1.mrna1;Target=FBgn0035699.1 749 1038 +
Chr1	stalkie_big_nohaplotig	CDS	2103418	2104036	99	+	0	ID=FBgn0035699.1.mrna1.cds1;Name=FBgn0035699.1;Parent=FBgn0035699.1.mrna1;Target=FBgn0035699.1 1 619 +
Chr1	stalkie_big_nohaplotig	CDS	2104249	2104351	100	+	1	ID=FBgn0035699.1.mrna1.cds2;Name=FBgn0035699.1;Parent=FBgn0035699.1.mrna1;Target=FBgn0035699.1 620 722 +
Chr1	stalkie_big_nohaplotig	CDS	2104988	2105013	100	+	2	ID=FBgn0035699.1.mrna1.cds3;Name=FBgn0035699.1;Parent=FBgn0035699.1.mrna1;Target=FBgn0035699.1 723 748 +
Chr1	stalkie_big_nohaplotig	CDS	2105692	2105981	99	+	1	ID=FBgn0035699.1.mrna1.cds4;Name=FBgn0035699.1;Parent=FBgn0035699.1.mrna1;Target=FBgn0035699.1 749 1038 +
Chr2	stalkie_big_nohaplotig	mRNA	27775011	27777024	.	+	.	ID=FBgn0259189.1.mrna1;Name=FBgn0259189.1;Parent=FBgn0259189.1.path1;Dir=sensecoverage=100.0;identity=98.3;matches=1861;mismatches=32;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	27775011	27775381	98	+	.	ID=FBgn0259189.1.mrna1.exon1;Name=FBgn0259189.1;Parent=FBgn0259189.1.mrna1;Target=FBgn0259189.1 1 371 +
Chr2	stalkie_big_nohaplotig	exon	27775447	27775966	97	+	.	ID=FBgn0259189.1.mrna1.exon2;Name=FBgn0259189.1;Parent=FBgn0259189.1.mrna1;Target=FBgn0259189.1 372 891 +
Chr2	stalkie_big_nohaplotig	exon	27776023	27777024	98	+	.	ID=FBgn0259189.1.mrna1.exon3;Name=FBgn0259189.1;Parent=FBgn0259189.1.mrna1;Target=FBgn0259189.1 892 1893 +
Chr2	stalkie_big_nohaplotig	CDS	27775011	27775381	98	+	0	ID=FBgn0259189.1.mrna1.cds1;Name=FBgn0259189.1;Parent=FBgn0259189.1.mrna1;Target=FBgn0259189.1 1 371 +
Chr2	stalkie_big_nohaplotig	CDS	27775447	27775966	97	+	2	ID=FBgn0259189.1.mrna1.cds2;Name=FBgn0259189.1;Parent=FBgn0259189.1.mrna1;Target=FBgn0259189.1 372 891 +
Chr2	stalkie_big_nohaplotig	CDS	27776023	27777024	98	+	0	ID=FBgn0259189.1.mrna1.cds3;Name=FBgn0259189.1;Parent=FBgn0259189.1.mrna1;Target=FBgn0259189.1 892 1893 +
Chr2	stalkie_big_nohaplotig	mRNA	90321534	90322434	.	+	.	ID=FBgn0003002.1.mrna1;Name=FBgn0003002.1;Parent=FBgn0003002.1.path1;Dir=indeterminatecoverage=51.5;identity=100.0;matches=901;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	90321534	90322434	100	+	.	ID=FBgn0003002.1.mrna1.exon1;Name=FBgn0003002.1;Parent=FBgn0003002.1.mrna1;Target=FBgn0003002.1 901 1 .
Chr2	stalkie_big_nohaplotig	CDS	90321534	90322434	100	+	0	ID=FBgn0003002.1.mrna1.cds1;Name=FBgn0003002.1;Parent=FBgn0003002.1.mrna1;Target=FBgn0003002.1 901 1 .
Chr2	stalkie_big_nohaplotig	mRNA	90368302	90369668	.	-	.	ID=FBgn0003002.1.mrna2;Name=FBgn0003002.1;Parent=FBgn0003002.1.path2;Dir=sensecoverage=48.5;identity=99.9;matches=847;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	90369499	90369668	100	-	.	ID=FBgn0003002.1.mrna2.exon1;Name=FBgn0003002.1;Parent=FBgn0003002.1.mrna2;Target=FBgn0003002.1 902 1071 +
Chr2	stalkie_big_nohaplotig	exon	90368302	90368979	99	-	.	ID=FBgn0003002.1.mrna2.exon2;Name=FBgn0003002.1;Parent=FBgn0003002.1.mrna2;Target=FBgn0003002.1 1072 1749 +
Chr2	stalkie_big_nohaplotig	CDS	90369499	90369668	100	-	1	ID=FBgn0003002.1.mrna2.cds1;Name=FBgn0003002.1;Parent=FBgn0003002.1.mrna2;Target=FBgn0003002.1 902 1071 +
Chr2	stalkie_big_nohaplotig	CDS	90368302	90368979	99	-	0	ID=FBgn0003002.1.mrna2.cds2;Name=FBgn0003002.1;Parent=FBgn0003002.1.mrna2;Target=FBgn0003002.1 1072 1749 +
Chr2	stalkie_big_nohaplotig	mRNA	9912089	9928038	.	+	.	ID=FBgn0034194.1.mrna1;Name=FBgn0034194.1;Parent=FBgn0034194.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=1359;mismatches=9;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	9912089	9912273	99	+	.	ID=FBgn0034194.1.mrna1.exon1;Name=FBgn0034194.1;Parent=FBgn0034194.1.mrna1;Target=FBgn0034194.1 1 185 +
Chr2	stalkie_big_nohaplotig	exon	9914127	9914243	100	+	.	ID=FBgn0034194.1.mrna1.exon2;Name=FBgn0034194.1;Parent=FBgn0034194.1.mrna1;Target=FBgn0034194.1 186 302 +
Chr2	stalkie_big_nohaplotig	exon	9914428	9914761	99	+	.	ID=FBgn0034194.1.mrna1.exon3;Name=FBgn0034194.1;Parent=FBgn0034194.1.mrna1;Target=FBgn0034194.1 303 636 +
Chr2	stalkie_big_nohaplotig	exon	9926246	9926332	100	+	.	ID=FBgn0034194.1.mrna1.exon4;Name=FBgn0034194.1;Parent=FBgn0034194.1.mrna1;Target=FBgn0034194.1 637 723 +
Chr2	stalkie_big_nohaplotig	exon	9926429	9926533	99	+	.	ID=FBgn0034194.1.mrna1.exon5;Name=FBgn0034194.1;Parent=FBgn0034194.1.mrna1;Target=FBgn0034194.1 724 828 +
Chr2	stalkie_big_nohaplotig	exon	9927439	9927570	100	+	.	ID=FBgn0034194.1.mrna1.exon6;Name=FBgn0034194.1;Parent=FBgn0034194.1.mrna1;Target=FBgn0034194.1 829 960 +
Chr2	stalkie_big_nohaplotig	exon	9927631	9928038	98	+	.	ID=FBgn0034194.1.mrna1.exon7;Name=FBgn0034194.1;Parent=FBgn0034194.1.mrna1;Target=FBgn0034194.1 961 1368 +
Chr2	stalkie_big_nohaplotig	CDS	9912089	9912273	99	+	0	ID=FBgn0034194.1.mrna1.cds1;Name=FBgn0034194.1;Parent=FBgn0034194.1.mrna1;Target=FBgn0034194.1 1 185 +
Chr2	stalkie_big_nohaplotig	CDS	9914127	9914243	100	+	2	ID=FBgn0034194.1.mrna1.cds2;Name=FBgn0034194.1;Parent=FBgn0034194.1.mrna1;Target=FBgn0034194.1 186 302 +
Chr2	stalkie_big_nohaplotig	CDS	9914428	9914761	99	+	2	ID=FBgn0034194.1.mrna1.cds3;Name=FBgn0034194.1;Parent=FBgn0034194.1.mrna1;Target=FBgn0034194.1 303 636 +
Chr2	stalkie_big_nohaplotig	CDS	9926246	9926332	100	+	0	ID=FBgn0034194.1.mrna1.cds4;Name=FBgn0034194.1;Parent=FBgn0034194.1.mrna1;Target=FBgn0034194.1 637 723 +
Chr2	stalkie_big_nohaplotig	CDS	9926429	9926533	99	+	0	ID=FBgn0034194.1.mrna1.cds5;Name=FBgn0034194.1;Parent=FBgn0034194.1.mrna1;Target=FBgn0034194.1 724 828 +
Chr2	stalkie_big_nohaplotig	CDS	9927439	9927570	100	+	0	ID=FBgn0034194.1.mrna1.cds6;Name=FBgn0034194.1;Parent=FBgn0034194.1.mrna1;Target=FBgn0034194.1 829 960 +
Chr2	stalkie_big_nohaplotig	CDS	9927631	9928038	98	+	0	ID=FBgn0034194.1.mrna1.cds7;Name=FBgn0034194.1;Parent=FBgn0034194.1.mrna1;Target=FBgn0034194.1 961 1368 +
ChrX	stalkie_big_nohaplotig	mRNA	22604751	22605665	.	+	.	ID=FBgn0032049.3.mrna1;Name=FBgn0032049.3;Parent=FBgn0032049.3.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=914;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	22604751	22605665	99	+	.	ID=FBgn0032049.3.mrna1.exon1;Name=FBgn0032049.3;Parent=FBgn0032049.3.mrna1;Target=FBgn0032049.3 915 1 .
ChrX	stalkie_big_nohaplotig	CDS	22604751	22605665	99	+	0	ID=FBgn0032049.3.mrna1.cds1;Name=FBgn0032049.3;Parent=FBgn0032049.3.mrna1;Target=FBgn0032049.3 915 1 .
Chr2	stalkie_big_nohaplotig	mRNA	33598250	33608499	.	+	.	ID=FBgn0033313.1.mrna1;Name=FBgn0033313.1;Parent=FBgn0033313.1.path1;Dir=sensecoverage=99.8;identity=99.3;matches=5035;mismatches=23;indels=10;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	33598250	33598440	99	+	.	ID=FBgn0033313.1.mrna1.exon1;Name=FBgn0033313.1;Parent=FBgn0033313.1.mrna1;Target=FBgn0033313.1 9 200 +
Chr2	stalkie_big_nohaplotig	exon	33598501	33599057	99	+	.	ID=FBgn0033313.1.mrna1.exon2;Name=FBgn0033313.1;Parent=FBgn0033313.1.mrna1;Target=FBgn0033313.1 201 757 +
Chr2	stalkie_big_nohaplotig	exon	33600100	33600444	100	+	.	ID=FBgn0033313.1.mrna1.exon3;Name=FBgn0033313.1;Parent=FBgn0033313.1.mrna1;Target=FBgn0033313.1 758 1102 +
Chr2	stalkie_big_nohaplotig	exon	33600504	33600820	100	+	.	ID=FBgn0033313.1.mrna1.exon4;Name=FBgn0033313.1;Parent=FBgn0033313.1.mrna1;Target=FBgn0033313.1 1103 1419 +
Chr2	stalkie_big_nohaplotig	exon	33600890	33601217	100	+	.	ID=FBgn0033313.1.mrna1.exon5;Name=FBgn0033313.1;Parent=FBgn0033313.1.mrna1;Target=FBgn0033313.1 1420 1747 +
Chr2	stalkie_big_nohaplotig	exon	33601602	33601829	99	+	.	ID=FBgn0033313.1.mrna1.exon6;Name=FBgn0033313.1;Parent=FBgn0033313.1.mrna1;Target=FBgn0033313.1 1748 1975 +
Chr2	stalkie_big_nohaplotig	exon	33601891	33602098	98	+	.	ID=FBgn0033313.1.mrna1.exon7;Name=FBgn0033313.1;Parent=FBgn0033313.1.mrna1;Target=FBgn0033313.1 1976 2183 +
Chr2	stalkie_big_nohaplotig	exon	33602173	33602413	99	+	.	ID=FBgn0033313.1.mrna1.exon8;Name=FBgn0033313.1;Parent=FBgn0033313.1.mrna1;Target=FBgn0033313.1 2184 2424 +
Chr2	stalkie_big_nohaplotig	exon	33603926	33604091	100	+	.	ID=FBgn0033313.1.mrna1.exon9;Name=FBgn0033313.1;Parent=FBgn0033313.1.mrna1;Target=FBgn0033313.1 2425 2590 +
Chr2	stalkie_big_nohaplotig	exon	33605723	33605952	100	+	.	ID=FBgn0033313.1.mrna1.exon10;Name=FBgn0033313.1;Parent=FBgn0033313.1.mrna1;Target=FBgn0033313.1 2591 2820 +
Chr2	stalkie_big_nohaplotig	exon	33606014	33606111	98	+	.	ID=FBgn0033313.1.mrna1.exon11;Name=FBgn0033313.1;Parent=FBgn0033313.1.mrna1;Target=FBgn0033313.1 2821 2918 +
Chr2	stalkie_big_nohaplotig	exon	33606172	33606358	99	+	.	ID=FBgn0033313.1.mrna1.exon12;Name=FBgn0033313.1;Parent=FBgn0033313.1.mrna1;Target=FBgn0033313.1 2919 3105 +
Chr2	stalkie_big_nohaplotig	exon	33606416	33607261	98	+	.	ID=FBgn0033313.1.mrna1.exon13;Name=FBgn0033313.1;Parent=FBgn0033313.1.mrna1;Target=FBgn0033313.1 3106 3945 +
Chr2	stalkie_big_nohaplotig	exon	33607315	33608033	99	+	.	ID=FBgn0033313.1.mrna1.exon14;Name=FBgn0033313.1;Parent=FBgn0033313.1.mrna1;Target=FBgn0033313.1 3946 4664 +
Chr2	stalkie_big_nohaplotig	exon	33608097	33608499	99	+	.	ID=FBgn0033313.1.mrna1.exon15;Name=FBgn0033313.1;Parent=FBgn0033313.1.mrna1;Target=FBgn0033313.1 4665 5070 +
Chr2	stalkie_big_nohaplotig	CDS	33598250	33598308	98	+	0	ID=FBgn0033313.1.mrna1.cds1;Name=FBgn0033313.1;Parent=FBgn0033313.1.mrna1;Target=FBgn0033313.1 9 68 +
ChrX	stalkie_big_nohaplotig	mRNA	16353006	16379786	.	+	.	ID=FBgn0051665.1.mrna1;Name=FBgn0051665.1;Parent=FBgn0051665.1.path1;Dir=sensecoverage=78.5;identity=99.9;matches=1969;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	16353006	16353232	100	+	.	ID=FBgn0051665.1.mrna1.exon1;Name=FBgn0051665.1;Parent=FBgn0051665.1.mrna1;Target=FBgn0051665.1 542 768 +
ChrX	stalkie_big_nohaplotig	exon	16361240	16361376	100	+	.	ID=FBgn0051665.1.mrna1.exon2;Name=FBgn0051665.1;Parent=FBgn0051665.1.mrna1;Target=FBgn0051665.1 769 905 +
ChrX	stalkie_big_nohaplotig	exon	16366581	16366741	100	+	.	ID=FBgn0051665.1.mrna1.exon3;Name=FBgn0051665.1;Parent=FBgn0051665.1.mrna1;Target=FBgn0051665.1 906 1066 +
ChrX	stalkie_big_nohaplotig	exon	16367397	16367669	100	+	.	ID=FBgn0051665.1.mrna1.exon4;Name=FBgn0051665.1;Parent=FBgn0051665.1.mrna1;Target=FBgn0051665.1 1067 1339 +
ChrX	stalkie_big_nohaplotig	exon	16371143	16371239	100	+	.	ID=FBgn0051665.1.mrna1.exon5;Name=FBgn0051665.1;Parent=FBgn0051665.1.mrna1;Target=FBgn0051665.1 1340 1436 +
ChrX	stalkie_big_nohaplotig	exon	16373867	16373994	100	+	.	ID=FBgn0051665.1.mrna1.exon6;Name=FBgn0051665.1;Parent=FBgn0051665.1.mrna1;Target=FBgn0051665.1 1437 1564 +
ChrX	stalkie_big_nohaplotig	exon	16375791	16375933	100	+	.	ID=FBgn0051665.1.mrna1.exon7;Name=FBgn0051665.1;Parent=FBgn0051665.1.mrna1;Target=FBgn0051665.1 1565 1707 +
ChrX	stalkie_big_nohaplotig	exon	16376270	16376392	100	+	.	ID=FBgn0051665.1.mrna1.exon8;Name=FBgn0051665.1;Parent=FBgn0051665.1.mrna1;Target=FBgn0051665.1 1708 1830 +
ChrX	stalkie_big_nohaplotig	exon	16377722	16377824	100	+	.	ID=FBgn0051665.1.mrna1.exon9;Name=FBgn0051665.1;Parent=FBgn0051665.1.mrna1;Target=FBgn0051665.1 1831 1933 +
ChrX	stalkie_big_nohaplotig	exon	16377983	16378164	100	+	.	ID=FBgn0051665.1.mrna1.exon10;Name=FBgn0051665.1;Parent=FBgn0051665.1.mrna1;Target=FBgn0051665.1 1934 2115 +
ChrX	stalkie_big_nohaplotig	exon	16379391	16379786	99	+	.	ID=FBgn0051665.1.mrna1.exon11;Name=FBgn0051665.1;Parent=FBgn0051665.1.mrna1;Target=FBgn0051665.1 2116 2511 +
ChrX	stalkie_big_nohaplotig	CDS	16353008	16353232	100	+	0	ID=FBgn0051665.1.mrna1.cds1;Name=FBgn0051665.1;Parent=FBgn0051665.1.mrna1;Target=FBgn0051665.1 544 768 +
ChrX	stalkie_big_nohaplotig	CDS	16361240	16361376	100	+	0	ID=FBgn0051665.1.mrna1.cds2;Name=FBgn0051665.1;Parent=FBgn0051665.1.mrna1;Target=FBgn0051665.1 769 905 +
ChrX	stalkie_big_nohaplotig	CDS	16366581	16366741	100	+	2	ID=FBgn0051665.1.mrna1.cds3;Name=FBgn0051665.1;Parent=FBgn0051665.1.mrna1;Target=FBgn0051665.1 906 1066 +
ChrX	stalkie_big_nohaplotig	CDS	16367397	16367669	100	+	1	ID=FBgn0051665.1.mrna1.cds4;Name=FBgn0051665.1;Parent=FBgn0051665.1.mrna1;Target=FBgn0051665.1 1067 1339 +
ChrX	stalkie_big_nohaplotig	CDS	16371143	16371239	100	+	1	ID=FBgn0051665.1.mrna1.cds5;Name=FBgn0051665.1;Parent=FBgn0051665.1.mrna1;Target=FBgn0051665.1 1340 1436 +
ChrX	stalkie_big_nohaplotig	CDS	16373867	16373994	100	+	2	ID=FBgn0051665.1.mrna1.cds6;Name=FBgn0051665.1;Parent=FBgn0051665.1.mrna1;Target=FBgn0051665.1 1437 1564 +
ChrX	stalkie_big_nohaplotig	CDS	16375791	16375933	100	+	1	ID=FBgn0051665.1.mrna1.cds7;Name=FBgn0051665.1;Parent=FBgn0051665.1.mrna1;Target=FBgn0051665.1 1565 1707 +
ChrX	stalkie_big_nohaplotig	CDS	16376270	16376392	100	+	0	ID=FBgn0051665.1.mrna1.cds8;Name=FBgn0051665.1;Parent=FBgn0051665.1.mrna1;Target=FBgn0051665.1 1708 1830 +
ChrX	stalkie_big_nohaplotig	CDS	16377722	16377824	100	+	0	ID=FBgn0051665.1.mrna1.cds9;Name=FBgn0051665.1;Parent=FBgn0051665.1.mrna1;Target=FBgn0051665.1 1831 1933 +
ChrX	stalkie_big_nohaplotig	CDS	16377983	16378164	100	+	1	ID=FBgn0051665.1.mrna1.cds10;Name=FBgn0051665.1;Parent=FBgn0051665.1.mrna1;Target=FBgn0051665.1 1934 2115 +
ChrX	stalkie_big_nohaplotig	CDS	16379391	16379786	99	+	0	ID=FBgn0051665.1.mrna1.cds11;Name=FBgn0051665.1;Parent=FBgn0051665.1.mrna1;Target=FBgn0051665.1 2116 2511 +
Chr2	stalkie_big_nohaplotig	mRNA	151986747	151987529	.	-	.	ID=ORF2752.mrna1;Name=ORF2752;Parent=ORF2752.path1;Dir=indeterminatecoverage=100.0;identity=96.2;matches=779;mismatches=4;indels=27;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	151986747	151987529	96	-	.	ID=ORF2752.mrna1.exon1;Name=ORF2752;Parent=ORF2752.mrna1;Target=ORF2752 810 1 .
Chr2	stalkie_big_nohaplotig	CDS	151986747	151987529	96	-	0	ID=ORF2752.mrna1.cds1;Name=ORF2752;Parent=ORF2752.mrna1;Target=ORF2752 810 1 .
ChrX	stalkie_big_nohaplotig	mRNA	25574718	25575602	.	-	.	ID=FBgn0053340.1.mrna1;Name=FBgn0053340.1;Parent=FBgn0053340.1.path1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=882;mismatches=3;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	25574718	25575602	99	-	.	ID=FBgn0053340.1.mrna1.exon1;Name=FBgn0053340.1;Parent=FBgn0053340.1.mrna1;Target=FBgn0053340.1 885 1 .
ChrX	stalkie_big_nohaplotig	CDS	25574718	25575602	99	-	0	ID=FBgn0053340.1.mrna1.cds1;Name=FBgn0053340.1;Parent=FBgn0053340.1.mrna1;Target=FBgn0053340.1 885 1 .
Chr1	stalkie_big_nohaplotig	mRNA	113771303	113772695	.	+	.	ID=ORF1067.mrna1;Name=ORF1067;Parent=ORF1067.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1253;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	113771303	113771464	99	+	.	ID=ORF1067.mrna1.exon1;Name=ORF1067;Parent=ORF1067.mrna1;Target=ORF1067 1 162 +
Chr1	stalkie_big_nohaplotig	exon	113771528	113772584	100	+	.	ID=ORF1067.mrna1.exon2;Name=ORF1067;Parent=ORF1067.mrna1;Target=ORF1067 163 1219 +
Chr1	stalkie_big_nohaplotig	exon	113772661	113772695	100	+	.	ID=ORF1067.mrna1.exon3;Name=ORF1067;Parent=ORF1067.mrna1;Target=ORF1067 1220 1254 +
Chr1	stalkie_big_nohaplotig	CDS	113771303	113771464	99	+	0	ID=ORF1067.mrna1.cds1;Name=ORF1067;Parent=ORF1067.mrna1;Target=ORF1067 1 162 +
Chr1	stalkie_big_nohaplotig	CDS	113771528	113772584	100	+	0	ID=ORF1067.mrna1.cds2;Name=ORF1067;Parent=ORF1067.mrna1;Target=ORF1067 163 1219 +
Chr1	stalkie_big_nohaplotig	CDS	113772661	113772695	100	+	1	ID=ORF1067.mrna1.cds3;Name=ORF1067;Parent=ORF1067.mrna1;Target=ORF1067 1220 1254 +
Chr2	stalkie_big_nohaplotig	mRNA	57548245	57551875	.	+	.	ID=FBgn0034069.1.mrna1;Name=FBgn0034069.1;Parent=FBgn0034069.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=979;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	57548245	57548476	99	+	.	ID=FBgn0034069.1.mrna1.exon1;Name=FBgn0034069.1;Parent=FBgn0034069.1.mrna1;Target=FBgn0034069.1 1 232 +
Chr2	stalkie_big_nohaplotig	exon	57548545	57548667	100	+	.	ID=FBgn0034069.1.mrna1.exon2;Name=FBgn0034069.1;Parent=FBgn0034069.1.mrna1;Target=FBgn0034069.1 233 355 +
Chr2	stalkie_big_nohaplotig	exon	57548888	57549034	99	+	.	ID=FBgn0034069.1.mrna1.exon3;Name=FBgn0034069.1;Parent=FBgn0034069.1.mrna1;Target=FBgn0034069.1 356 502 +
Chr2	stalkie_big_nohaplotig	exon	57551224	57551338	100	+	.	ID=FBgn0034069.1.mrna1.exon4;Name=FBgn0034069.1;Parent=FBgn0034069.1.mrna1;Target=FBgn0034069.1 503 617 +
Chr2	stalkie_big_nohaplotig	exon	57551423	57551592	100	+	.	ID=FBgn0034069.1.mrna1.exon5;Name=FBgn0034069.1;Parent=FBgn0034069.1.mrna1;Target=FBgn0034069.1 618 787 +
Chr2	stalkie_big_nohaplotig	exon	57551682	57551875	100	+	.	ID=FBgn0034069.1.mrna1.exon6;Name=FBgn0034069.1;Parent=FBgn0034069.1.mrna1;Target=FBgn0034069.1 788 981 +
Chr2	stalkie_big_nohaplotig	CDS	57548245	57548476	99	+	0	ID=FBgn0034069.1.mrna1.cds1;Name=FBgn0034069.1;Parent=FBgn0034069.1.mrna1;Target=FBgn0034069.1 1 232 +
Chr2	stalkie_big_nohaplotig	CDS	57548545	57548667	100	+	1	ID=FBgn0034069.1.mrna1.cds2;Name=FBgn0034069.1;Parent=FBgn0034069.1.mrna1;Target=FBgn0034069.1 233 355 +
Chr2	stalkie_big_nohaplotig	CDS	57548888	57549034	99	+	1	ID=FBgn0034069.1.mrna1.cds3;Name=FBgn0034069.1;Parent=FBgn0034069.1.mrna1;Target=FBgn0034069.1 356 502 +
Chr2	stalkie_big_nohaplotig	CDS	57551224	57551338	100	+	1	ID=FBgn0034069.1.mrna1.cds4;Name=FBgn0034069.1;Parent=FBgn0034069.1.mrna1;Target=FBgn0034069.1 503 617 +
Chr2	stalkie_big_nohaplotig	CDS	57551423	57551592	100	+	2	ID=FBgn0034069.1.mrna1.cds5;Name=FBgn0034069.1;Parent=FBgn0034069.1.mrna1;Target=FBgn0034069.1 618 787 +
Chr2	stalkie_big_nohaplotig	CDS	57551682	57551875	100	+	1	ID=FBgn0034069.1.mrna1.cds6;Name=FBgn0034069.1;Parent=FBgn0034069.1.mrna1;Target=FBgn0034069.1 788 981 +
Chr1	stalkie_big_nohaplotig	mRNA	38986654	38987723	.	-	.	ID=FBgn0052174.1.mrna1;Name=FBgn0052174.1;Parent=FBgn0052174.1.path1;Dir=sensecoverage=94.9;identity=98.9;matches=825;mismatches=9;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	38987467	38987723	98	-	.	ID=FBgn0052174.1.mrna1.exon1;Name=FBgn0052174.1;Parent=FBgn0052174.1.mrna1;Target=FBgn0052174.1 46 302 +
Chr1	stalkie_big_nohaplotig	exon	38987150	38987354	99	-	.	ID=FBgn0052174.1.mrna1.exon2;Name=FBgn0052174.1;Parent=FBgn0052174.1.mrna1;Target=FBgn0052174.1 303 507 +
Chr1	stalkie_big_nohaplotig	exon	38986865	38987088	97	-	.	ID=FBgn0052174.1.mrna1.exon3;Name=FBgn0052174.1;Parent=FBgn0052174.1.mrna1;Target=FBgn0052174.1 508 731 +
Chr1	stalkie_big_nohaplotig	exon	38986654	38986801	100	-	.	ID=FBgn0052174.1.mrna1.exon4;Name=FBgn0052174.1;Parent=FBgn0052174.1.mrna1;Target=FBgn0052174.1 732 879 +
Chr1	stalkie_big_nohaplotig	CDS	38987467	38987723	98	-	0	ID=FBgn0052174.1.mrna1.cds1;Name=FBgn0052174.1;Parent=FBgn0052174.1.mrna1;Target=FBgn0052174.1 46 302 +
Chr1	stalkie_big_nohaplotig	CDS	38987150	38987354	99	-	2	ID=FBgn0052174.1.mrna1.cds2;Name=FBgn0052174.1;Parent=FBgn0052174.1.mrna1;Target=FBgn0052174.1 303 507 +
Chr1	stalkie_big_nohaplotig	CDS	38986865	38987088	97	-	0	ID=FBgn0052174.1.mrna1.cds3;Name=FBgn0052174.1;Parent=FBgn0052174.1.mrna1;Target=FBgn0052174.1 508 731 +
Chr1	stalkie_big_nohaplotig	CDS	38986654	38986801	100	-	2	ID=FBgn0052174.1.mrna1.cds4;Name=FBgn0052174.1;Parent=FBgn0052174.1.mrna1;Target=FBgn0052174.1 732 879 +
Chr2	stalkie_big_nohaplotig	mRNA	113580185	113597902	.	+	.	ID=FBgn0022800.1.mrna1;Name=FBgn0022800.1;Parent=FBgn0022800.1.path1;Dir=sensecoverage=76.7;identity=100.0;matches=1515;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	113580185	113580471	100	+	.	ID=FBgn0022800.1.mrna1.exon1;Name=FBgn0022800.1;Parent=FBgn0022800.1.mrna1;Target=FBgn0022800.1 125 411 +
Chr2	stalkie_big_nohaplotig	exon	113581067	113582053	100	+	.	ID=FBgn0022800.1.mrna1.exon2;Name=FBgn0022800.1;Parent=FBgn0022800.1.mrna1;Target=FBgn0022800.1 412 1398 +
Chr2	stalkie_big_nohaplotig	exon	113597662	113597902	100	+	.	ID=FBgn0022800.1.mrna1.exon3;Name=FBgn0022800.1;Parent=FBgn0022800.1.mrna1;Target=FBgn0022800.1 1399 1639 +
Chr2	stalkie_big_nohaplotig	CDS	113580187	113580471	100	+	0	ID=FBgn0022800.1.mrna1.cds1;Name=FBgn0022800.1;Parent=FBgn0022800.1.mrna1;Target=FBgn0022800.1 127 411 +
Chr2	stalkie_big_nohaplotig	CDS	113581067	113582053	100	+	0	ID=FBgn0022800.1.mrna1.cds2;Name=FBgn0022800.1;Parent=FBgn0022800.1.mrna1;Target=FBgn0022800.1 412 1398 +
Chr2	stalkie_big_nohaplotig	CDS	113597662	113597902	100	+	0	ID=FBgn0022800.1.mrna1.cds3;Name=FBgn0022800.1;Parent=FBgn0022800.1.mrna1;Target=FBgn0022800.1 1399 1639 +
Chr1	stalkie_big_nohaplotig	mRNA	162235691	162238094	.	+	.	ID=FBgn0039862.1.mrna1;Name=FBgn0039862.1;Parent=FBgn0039862.1.path1;Dir=sensecoverage=94.6;identity=99.1;matches=2257;mismatches=21;indels=0;unknowns=1
Chr1	stalkie_big_nohaplotig	exon	162235691	162235865	100	+	.	ID=FBgn0039862.1.mrna1.exon1;Name=FBgn0039862.1;Parent=FBgn0039862.1.mrna1;Target=FBgn0039862.1 1 175 +
Chr1	stalkie_big_nohaplotig	exon	162235991	162238094	99	+	.	ID=FBgn0039862.1.mrna1.exon2;Name=FBgn0039862.1;Parent=FBgn0039862.1.mrna1;Target=FBgn0039862.1 176 2279 +
Chr1	stalkie_big_nohaplotig	CDS	162235691	162235865	100	+	0	ID=FBgn0039862.1.mrna1.cds1;Name=FBgn0039862.1;Parent=FBgn0039862.1.mrna1;Target=FBgn0039862.1 1 175 +
Chr1	stalkie_big_nohaplotig	CDS	162235991	162238092	99	+	1	ID=FBgn0039862.1.mrna1.cds2;Name=FBgn0039862.1;Parent=FBgn0039862.1.mrna1;Target=FBgn0039862.1 176 2277 +
Chr2	stalkie_big_nohaplotig	mRNA	60440257	60444954	.	-	.	ID=FBgn0033021.1.mrna1;Name=FBgn0033021.1;Parent=FBgn0033021.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=2331;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	60444802	60444954	100	-	.	ID=FBgn0033021.1.mrna1.exon1;Name=FBgn0033021.1;Parent=FBgn0033021.1.mrna1;Target=FBgn0033021.1 1 153 +
Chr2	stalkie_big_nohaplotig	exon	60443099	60443672	99	-	.	ID=FBgn0033021.1.mrna1.exon2;Name=FBgn0033021.1;Parent=FBgn0033021.1.mrna1;Target=FBgn0033021.1 154 727 +
Chr2	stalkie_big_nohaplotig	exon	60442489	60443028	99	-	.	ID=FBgn0033021.1.mrna1.exon3;Name=FBgn0033021.1;Parent=FBgn0033021.1.mrna1;Target=FBgn0033021.1 728 1267 +
Chr2	stalkie_big_nohaplotig	exon	60441980	60442419	100	-	.	ID=FBgn0033021.1.mrna1.exon4;Name=FBgn0033021.1;Parent=FBgn0033021.1.mrna1;Target=FBgn0033021.1 1268 1707 +
Chr2	stalkie_big_nohaplotig	exon	60440742	60440939	100	-	.	ID=FBgn0033021.1.mrna1.exon5;Name=FBgn0033021.1;Parent=FBgn0033021.1.mrna1;Target=FBgn0033021.1 1708 1905 +
Chr2	stalkie_big_nohaplotig	exon	60440257	60440685	99	-	.	ID=FBgn0033021.1.mrna1.exon6;Name=FBgn0033021.1;Parent=FBgn0033021.1.mrna1;Target=FBgn0033021.1 1906 2334 +
Chr2	stalkie_big_nohaplotig	CDS	60444802	60444954	100	-	0	ID=FBgn0033021.1.mrna1.cds1;Name=FBgn0033021.1;Parent=FBgn0033021.1.mrna1;Target=FBgn0033021.1 1 153 +
Chr2	stalkie_big_nohaplotig	CDS	60443099	60443672	99	-	0	ID=FBgn0033021.1.mrna1.cds2;Name=FBgn0033021.1;Parent=FBgn0033021.1.mrna1;Target=FBgn0033021.1 154 727 +
Chr2	stalkie_big_nohaplotig	CDS	60442489	60443028	99	-	1	ID=FBgn0033021.1.mrna1.cds3;Name=FBgn0033021.1;Parent=FBgn0033021.1.mrna1;Target=FBgn0033021.1 728 1267 +
Chr2	stalkie_big_nohaplotig	CDS	60441980	60442419	100	-	1	ID=FBgn0033021.1.mrna1.cds4;Name=FBgn0033021.1;Parent=FBgn0033021.1.mrna1;Target=FBgn0033021.1 1268 1707 +
Chr2	stalkie_big_nohaplotig	CDS	60440742	60440939	100	-	0	ID=FBgn0033021.1.mrna1.cds5;Name=FBgn0033021.1;Parent=FBgn0033021.1.mrna1;Target=FBgn0033021.1 1708 1905 +
Chr2	stalkie_big_nohaplotig	CDS	60440257	60440685	99	-	0	ID=FBgn0033021.1.mrna1.cds6;Name=FBgn0033021.1;Parent=FBgn0033021.1.mrna1;Target=FBgn0033021.1 1906 2334 +
Chr2	stalkie_big_nohaplotig	mRNA	81788471	81790769	.	-	.	ID=FBgn0038000.1.mrna1;Name=FBgn0038000.1;Parent=FBgn0038000.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=1185;mismatches=6;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	81790541	81790769	99	-	.	ID=FBgn0038000.1.mrna1.exon1;Name=FBgn0038000.1;Parent=FBgn0038000.1.mrna1;Target=FBgn0038000.1 1 229 +
Chr2	stalkie_big_nohaplotig	exon	81790169	81790479	99	-	.	ID=FBgn0038000.1.mrna1.exon2;Name=FBgn0038000.1;Parent=FBgn0038000.1.mrna1;Target=FBgn0038000.1 230 540 +
Chr2	stalkie_big_nohaplotig	exon	81790010	81790108	100	-	.	ID=FBgn0038000.1.mrna1.exon3;Name=FBgn0038000.1;Parent=FBgn0038000.1.mrna1;Target=FBgn0038000.1 541 639 +
Chr2	stalkie_big_nohaplotig	exon	81789358	81789417	96	-	.	ID=FBgn0038000.1.mrna1.exon4;Name=FBgn0038000.1;Parent=FBgn0038000.1.mrna1;Target=FBgn0038000.1 640 699 +
Chr2	stalkie_big_nohaplotig	exon	81789201	81789278	100	-	.	ID=FBgn0038000.1.mrna1.exon5;Name=FBgn0038000.1;Parent=FBgn0038000.1.mrna1;Target=FBgn0038000.1 700 777 +
Chr2	stalkie_big_nohaplotig	exon	81789101	81789124	95	-	.	ID=FBgn0038000.1.mrna1.exon6;Name=FBgn0038000.1;Parent=FBgn0038000.1.mrna1;Target=FBgn0038000.1 778 801 +
Chr2	stalkie_big_nohaplotig	exon	81788942	81788995	100	-	.	ID=FBgn0038000.1.mrna1.exon7;Name=FBgn0038000.1;Parent=FBgn0038000.1.mrna1;Target=FBgn0038000.1 802 855 +
Chr2	stalkie_big_nohaplotig	exon	81788834	81788869	100	-	.	ID=FBgn0038000.1.mrna1.exon8;Name=FBgn0038000.1;Parent=FBgn0038000.1.mrna1;Target=FBgn0038000.1 856 891 +
Chr2	stalkie_big_nohaplotig	exon	81788471	81788770	99	-	.	ID=FBgn0038000.1.mrna1.exon9;Name=FBgn0038000.1;Parent=FBgn0038000.1.mrna1;Target=FBgn0038000.1 892 1191 +
Chr2	stalkie_big_nohaplotig	CDS	81790541	81790769	99	-	0	ID=FBgn0038000.1.mrna1.cds1;Name=FBgn0038000.1;Parent=FBgn0038000.1.mrna1;Target=FBgn0038000.1 1 229 +
Chr2	stalkie_big_nohaplotig	CDS	81790169	81790479	99	-	1	ID=FBgn0038000.1.mrna1.cds2;Name=FBgn0038000.1;Parent=FBgn0038000.1.mrna1;Target=FBgn0038000.1 230 540 +
Chr2	stalkie_big_nohaplotig	CDS	81790010	81790108	100	-	0	ID=FBgn0038000.1.mrna1.cds3;Name=FBgn0038000.1;Parent=FBgn0038000.1.mrna1;Target=FBgn0038000.1 541 639 +
Chr2	stalkie_big_nohaplotig	CDS	81789358	81789417	96	-	0	ID=FBgn0038000.1.mrna1.cds4;Name=FBgn0038000.1;Parent=FBgn0038000.1.mrna1;Target=FBgn0038000.1 640 699 +
Chr2	stalkie_big_nohaplotig	CDS	81789201	81789278	100	-	0	ID=FBgn0038000.1.mrna1.cds5;Name=FBgn0038000.1;Parent=FBgn0038000.1.mrna1;Target=FBgn0038000.1 700 777 +
Chr2	stalkie_big_nohaplotig	CDS	81789101	81789124	95	-	0	ID=FBgn0038000.1.mrna1.cds6;Name=FBgn0038000.1;Parent=FBgn0038000.1.mrna1;Target=FBgn0038000.1 778 801 +
Chr2	stalkie_big_nohaplotig	CDS	81788942	81788995	100	-	0	ID=FBgn0038000.1.mrna1.cds7;Name=FBgn0038000.1;Parent=FBgn0038000.1.mrna1;Target=FBgn0038000.1 802 855 +
Chr2	stalkie_big_nohaplotig	CDS	81788834	81788869	100	-	0	ID=FBgn0038000.1.mrna1.cds8;Name=FBgn0038000.1;Parent=FBgn0038000.1.mrna1;Target=FBgn0038000.1 856 891 +
Chr2	stalkie_big_nohaplotig	CDS	81788471	81788770	99	-	0	ID=FBgn0038000.1.mrna1.cds9;Name=FBgn0038000.1;Parent=FBgn0038000.1.mrna1;Target=FBgn0038000.1 892 1191 +
Chr1	stalkie_big_nohaplotig	mRNA	57841996	57843073	.	+	.	ID=ORF1786.mrna1;Name=ORF1786;Parent=ORF1786.path1;Dir=sensecoverage=100.0;identity=100.0;matches=996;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	57841996	57842144	100	+	.	ID=ORF1786.mrna1.exon1;Name=ORF1786;Parent=ORF1786.mrna1;Target=ORF1786 1 149 +
Chr1	stalkie_big_nohaplotig	exon	57842227	57843073	100	+	.	ID=ORF1786.mrna1.exon2;Name=ORF1786;Parent=ORF1786.mrna1;Target=ORF1786 150 996 +
Chr1	stalkie_big_nohaplotig	CDS	57841996	57842144	100	+	0	ID=ORF1786.mrna1.cds1;Name=ORF1786;Parent=ORF1786.mrna1;Target=ORF1786 1 149 +
Chr1	stalkie_big_nohaplotig	CDS	57842227	57843073	100	+	2	ID=ORF1786.mrna1.cds2;Name=ORF1786;Parent=ORF1786.mrna1;Target=ORF1786 150 996 +
Chr2	stalkie_big_nohaplotig	mRNA	85404388	85453323	.	-	.	ID=FBgn0000036.1.mrna2;Name=FBgn0000036.1;Parent=FBgn0000036.1.path2;Dir=sensecoverage=83.2;identity=99.9;matches=1480;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	85453279	85453323	100	-	.	ID=FBgn0000036.1.mrna2.exon1;Name=FBgn0000036.1;Parent=FBgn0000036.1.mrna2;Target=FBgn0000036.1 301 345 +
Chr2	stalkie_big_nohaplotig	exon	85447025	85447134	100	-	.	ID=FBgn0000036.1.mrna2.exon2;Name=FBgn0000036.1;Parent=FBgn0000036.1.mrna2;Target=FBgn0000036.1 346 455 +
Chr2	stalkie_big_nohaplotig	exon	85429186	85429366	100	-	.	ID=FBgn0000036.1.mrna2.exon3;Name=FBgn0000036.1;Parent=FBgn0000036.1.mrna2;Target=FBgn0000036.1 456 636 +
Chr2	stalkie_big_nohaplotig	exon	85420051	85420511	99	-	.	ID=FBgn0000036.1.mrna2.exon4;Name=FBgn0000036.1;Parent=FBgn0000036.1.mrna2;Target=FBgn0000036.1 637 1097 +
Chr2	stalkie_big_nohaplotig	exon	85418008	85418222	100	-	.	ID=FBgn0000036.1.mrna2.exon5;Name=FBgn0000036.1;Parent=FBgn0000036.1.mrna2;Target=FBgn0000036.1 1098 1312 +
Chr2	stalkie_big_nohaplotig	exon	85414273	85414538	100	-	.	ID=FBgn0000036.1.mrna2.exon6;Name=FBgn0000036.1;Parent=FBgn0000036.1.mrna2;Target=FBgn0000036.1 1313 1578 +
Chr2	stalkie_big_nohaplotig	exon	85404388	85404591	100	-	.	ID=FBgn0000036.1.mrna2.exon7;Name=FBgn0000036.1;Parent=FBgn0000036.1.mrna2;Target=FBgn0000036.1 1579 1782 +
Chr2	stalkie_big_nohaplotig	CDS	85453279	85453323	100	-	0	ID=FBgn0000036.1.mrna2.cds1;Name=FBgn0000036.1;Parent=FBgn0000036.1.mrna2;Target=FBgn0000036.1 301 345 +
Chr2	stalkie_big_nohaplotig	CDS	85447025	85447134	100	-	0	ID=FBgn0000036.1.mrna2.cds2;Name=FBgn0000036.1;Parent=FBgn0000036.1.mrna2;Target=FBgn0000036.1 346 455 +
Chr2	stalkie_big_nohaplotig	CDS	85429186	85429366	100	-	2	ID=FBgn0000036.1.mrna2.cds3;Name=FBgn0000036.1;Parent=FBgn0000036.1.mrna2;Target=FBgn0000036.1 456 636 +
Chr2	stalkie_big_nohaplotig	CDS	85420051	85420511	99	-	0	ID=FBgn0000036.1.mrna2.cds4;Name=FBgn0000036.1;Parent=FBgn0000036.1.mrna2;Target=FBgn0000036.1 637 1097 +
Chr2	stalkie_big_nohaplotig	CDS	85418008	85418222	100	-	2	ID=FBgn0000036.1.mrna2.cds5;Name=FBgn0000036.1;Parent=FBgn0000036.1.mrna2;Target=FBgn0000036.1 1098 1312 +
Chr2	stalkie_big_nohaplotig	CDS	85414273	85414538	100	-	1	ID=FBgn0000036.1.mrna2.cds6;Name=FBgn0000036.1;Parent=FBgn0000036.1.mrna2;Target=FBgn0000036.1 1313 1578 +
Chr2	stalkie_big_nohaplotig	CDS	85404388	85404591	100	-	0	ID=FBgn0000036.1.mrna2.cds7;Name=FBgn0000036.1;Parent=FBgn0000036.1.mrna2;Target=FBgn0000036.1 1579 1782 +
Chr1	stalkie_big_nohaplotig	mRNA	164691982	164692743	.	+	.	ID=FBgn0030332.2.mrna1;Name=FBgn0030332.2;Parent=FBgn0030332.2.path1;Dir=sensecoverage=100.0;identity=100.0;matches=705;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	164691982	164692515	100	+	.	ID=FBgn0030332.2.mrna1.exon1;Name=FBgn0030332.2;Parent=FBgn0030332.2.mrna1;Target=FBgn0030332.2 1 534 +
Chr1	stalkie_big_nohaplotig	exon	164692573	164692743	100	+	.	ID=FBgn0030332.2.mrna1.exon2;Name=FBgn0030332.2;Parent=FBgn0030332.2.mrna1;Target=FBgn0030332.2 535 705 +
Chr1	stalkie_big_nohaplotig	CDS	164691982	164692515	100	+	0	ID=FBgn0030332.2.mrna1.cds1;Name=FBgn0030332.2;Parent=FBgn0030332.2.mrna1;Target=FBgn0030332.2 1 534 +
Chr1	stalkie_big_nohaplotig	CDS	164692573	164692743	100	+	0	ID=FBgn0030332.2.mrna1.cds2;Name=FBgn0030332.2;Parent=FBgn0030332.2.mrna1;Target=FBgn0030332.2 535 705 +
Chr1	stalkie_big_nohaplotig	mRNA	145089895	145093712	.	+	.	ID=FBgn0052767.mrna1;Name=FBgn0052767;Parent=FBgn0052767.path1;Dir=sensecoverage=100.0;identity=99.3;matches=1841;mismatches=13;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	145089895	145090256	98	+	.	ID=FBgn0052767.mrna1.exon1;Name=FBgn0052767;Parent=FBgn0052767.mrna1;Target=FBgn0052767 1 362 +
Chr1	stalkie_big_nohaplotig	exon	145090323	145091038	99	+	.	ID=FBgn0052767.mrna1.exon2;Name=FBgn0052767;Parent=FBgn0052767.mrna1;Target=FBgn0052767 363 1078 +
Chr1	stalkie_big_nohaplotig	exon	145092937	145093712	99	+	.	ID=FBgn0052767.mrna1.exon3;Name=FBgn0052767;Parent=FBgn0052767.mrna1;Target=FBgn0052767 1079 1854 +
Chr1	stalkie_big_nohaplotig	CDS	145089895	145090256	98	+	0	ID=FBgn0052767.mrna1.cds1;Name=FBgn0052767;Parent=FBgn0052767.mrna1;Target=FBgn0052767 1 362 +
Chr1	stalkie_big_nohaplotig	CDS	145090323	145091038	99	+	2	ID=FBgn0052767.mrna1.cds2;Name=FBgn0052767;Parent=FBgn0052767.mrna1;Target=FBgn0052767 363 1078 +
Chr1	stalkie_big_nohaplotig	CDS	145092937	145093712	99	+	1	ID=FBgn0052767.mrna1.cds3;Name=FBgn0052767;Parent=FBgn0052767.mrna1;Target=FBgn0052767 1079 1854 +
Chr1	stalkie_big_nohaplotig	mRNA	175160123	175161480	.	+	.	ID=ORF884.mrna1;Name=ORF884;Parent=ORF884.path1;Dir=indeterminatecoverage=99.9;identity=98.7;matches=1345;mismatches=12;indels=6;unknowns=1
Chr1	stalkie_big_nohaplotig	exon	175160123	175161480	98	+	.	ID=ORF884.mrna1.exon1;Name=ORF884;Parent=ORF884.mrna1;Target=ORF884 1365 2 .
Chr1	stalkie_big_nohaplotig	CDS	175160125	175161480	98	+	0	ID=ORF884.mrna1.cds1;Name=ORF884;Parent=ORF884.mrna1;Target=ORF884 1365 4 .
Chr1	stalkie_big_nohaplotig	mRNA	43431189	43437369	.	+	.	ID=FBgn0036773.1.mrna1;Name=FBgn0036773.1;Parent=FBgn0036773.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=940;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	43431189	43431312	99	+	.	ID=FBgn0036773.1.mrna1.exon1;Name=FBgn0036773.1;Parent=FBgn0036773.1.mrna1;Target=FBgn0036773.1 1 124 +
Chr1	stalkie_big_nohaplotig	exon	43433935	43434042	98	+	.	ID=FBgn0036773.1.mrna1.exon2;Name=FBgn0036773.1;Parent=FBgn0036773.1.mrna1;Target=FBgn0036773.1 125 232 +
Chr1	stalkie_big_nohaplotig	exon	43434128	43434292	100	+	.	ID=FBgn0036773.1.mrna1.exon3;Name=FBgn0036773.1;Parent=FBgn0036773.1.mrna1;Target=FBgn0036773.1 233 397 +
Chr1	stalkie_big_nohaplotig	exon	43436256	43436356	100	+	.	ID=FBgn0036773.1.mrna1.exon4;Name=FBgn0036773.1;Parent=FBgn0036773.1.mrna1;Target=FBgn0036773.1 398 498 +
Chr1	stalkie_big_nohaplotig	exon	43436443	43436608	100	+	.	ID=FBgn0036773.1.mrna1.exon5;Name=FBgn0036773.1;Parent=FBgn0036773.1.mrna1;Target=FBgn0036773.1 499 664 +
Chr1	stalkie_big_nohaplotig	exon	43437089	43437369	99	+	.	ID=FBgn0036773.1.mrna1.exon6;Name=FBgn0036773.1;Parent=FBgn0036773.1.mrna1;Target=FBgn0036773.1 665 945 +
Chr1	stalkie_big_nohaplotig	CDS	43431189	43431312	99	+	0	ID=FBgn0036773.1.mrna1.cds1;Name=FBgn0036773.1;Parent=FBgn0036773.1.mrna1;Target=FBgn0036773.1 1 124 +
Chr1	stalkie_big_nohaplotig	CDS	43433935	43434042	98	+	1	ID=FBgn0036773.1.mrna1.cds2;Name=FBgn0036773.1;Parent=FBgn0036773.1.mrna1;Target=FBgn0036773.1 125 232 +
Chr1	stalkie_big_nohaplotig	CDS	43434128	43434292	100	+	1	ID=FBgn0036773.1.mrna1.cds3;Name=FBgn0036773.1;Parent=FBgn0036773.1.mrna1;Target=FBgn0036773.1 233 397 +
Chr1	stalkie_big_nohaplotig	CDS	43436256	43436356	100	+	1	ID=FBgn0036773.1.mrna1.cds4;Name=FBgn0036773.1;Parent=FBgn0036773.1.mrna1;Target=FBgn0036773.1 398 498 +
Chr1	stalkie_big_nohaplotig	CDS	43436443	43436608	100	+	0	ID=FBgn0036773.1.mrna1.cds5;Name=FBgn0036773.1;Parent=FBgn0036773.1.mrna1;Target=FBgn0036773.1 499 664 +
Chr1	stalkie_big_nohaplotig	CDS	43437089	43437369	99	+	1	ID=FBgn0036773.1.mrna1.cds6;Name=FBgn0036773.1;Parent=FBgn0036773.1.mrna1;Target=FBgn0036773.1 665 945 +
Chr1	stalkie_big_nohaplotig	mRNA	42486456	42486606	.	-	.	ID=FBgn0036780.1.mrna2;Name=FBgn0036780.1;Parent=FBgn0036780.1.path2;Dir=indeterminatecoverage=39.9;identity=98.7;matches=149;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	42486456	42486606	98	-	.	ID=FBgn0036780.1.mrna2.exon1;Name=FBgn0036780.1;Parent=FBgn0036780.1.mrna2;Target=FBgn0036780.1 378 228 .
Chr1	stalkie_big_nohaplotig	CDS	42486456	42486606	98	-	2	ID=FBgn0036780.1.mrna2.cds1;Name=FBgn0036780.1;Parent=FBgn0036780.1.mrna2;Target=FBgn0036780.1 378 228 .
Chr2	stalkie_big_nohaplotig	mRNA	8484634	8486022	.	-	.	ID=FBgn0263510.1.mrna1;Name=FBgn0263510.1;Parent=FBgn0263510.1.path1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1386;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	8484634	8486022	99	-	.	ID=FBgn0263510.1.mrna1.exon1;Name=FBgn0263510.1;Parent=FBgn0263510.1.mrna1;Target=FBgn0263510.1 1389 1 .
Chr2	stalkie_big_nohaplotig	CDS	8484634	8486022	99	-	0	ID=FBgn0263510.1.mrna1.cds1;Name=FBgn0263510.1;Parent=FBgn0263510.1.mrna1;Target=FBgn0263510.1 1389 1 .
Chr2	stalkie_big_nohaplotig	mRNA	77766561	77769787	.	+	.	ID=FBgn0038854.1.mrna1;Name=FBgn0038854.1;Parent=FBgn0038854.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2876;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	77766561	77766687	100	+	.	ID=FBgn0038854.1.mrna1.exon1;Name=FBgn0038854.1;Parent=FBgn0038854.1.mrna1;Target=FBgn0038854.1 1 127 +
Chr2	stalkie_big_nohaplotig	exon	77766775	77766958	100	+	.	ID=FBgn0038854.1.mrna1.exon2;Name=FBgn0038854.1;Parent=FBgn0038854.1.mrna1;Target=FBgn0038854.1 128 311 +
Chr2	stalkie_big_nohaplotig	exon	77767032	77768316	100	+	.	ID=FBgn0038854.1.mrna1.exon3;Name=FBgn0038854.1;Parent=FBgn0038854.1.mrna1;Target=FBgn0038854.1 312 1596 +
Chr2	stalkie_big_nohaplotig	exon	77768376	77768580	100	+	.	ID=FBgn0038854.1.mrna1.exon4;Name=FBgn0038854.1;Parent=FBgn0038854.1.mrna1;Target=FBgn0038854.1 1597 1801 +
Chr2	stalkie_big_nohaplotig	exon	77768643	77768815	100	+	.	ID=FBgn0038854.1.mrna1.exon5;Name=FBgn0038854.1;Parent=FBgn0038854.1.mrna1;Target=FBgn0038854.1 1802 1974 +
Chr2	stalkie_big_nohaplotig	exon	77768885	77769787	99	+	.	ID=FBgn0038854.1.mrna1.exon6;Name=FBgn0038854.1;Parent=FBgn0038854.1.mrna1;Target=FBgn0038854.1 1975 2877 +
Chr2	stalkie_big_nohaplotig	CDS	77766561	77766687	100	+	0	ID=FBgn0038854.1.mrna1.cds1;Name=FBgn0038854.1;Parent=FBgn0038854.1.mrna1;Target=FBgn0038854.1 1 127 +
Chr2	stalkie_big_nohaplotig	CDS	77766775	77766958	100	+	1	ID=FBgn0038854.1.mrna1.cds2;Name=FBgn0038854.1;Parent=FBgn0038854.1.mrna1;Target=FBgn0038854.1 128 311 +
Chr2	stalkie_big_nohaplotig	CDS	77767032	77768316	100	+	2	ID=FBgn0038854.1.mrna1.cds3;Name=FBgn0038854.1;Parent=FBgn0038854.1.mrna1;Target=FBgn0038854.1 312 1596 +
Chr2	stalkie_big_nohaplotig	CDS	77768376	77768580	100	+	0	ID=FBgn0038854.1.mrna1.cds4;Name=FBgn0038854.1;Parent=FBgn0038854.1.mrna1;Target=FBgn0038854.1 1597 1801 +
Chr2	stalkie_big_nohaplotig	CDS	77768643	77768815	100	+	1	ID=FBgn0038854.1.mrna1.cds5;Name=FBgn0038854.1;Parent=FBgn0038854.1.mrna1;Target=FBgn0038854.1 1802 1974 +
Chr2	stalkie_big_nohaplotig	CDS	77768885	77769787	99	+	0	ID=FBgn0038854.1.mrna1.cds6;Name=FBgn0038854.1;Parent=FBgn0038854.1.mrna1;Target=FBgn0038854.1 1975 2877 +
Chr1	stalkie_big_nohaplotig	mRNA	146235592	146526180	.	-	.	ID=FBgn0003380.1.mrna1;Name=FBgn0003380.1;Parent=FBgn0003380.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1685;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	146526020	146526180	100	-	.	ID=FBgn0003380.1.mrna1.exon1;Name=FBgn0003380.1;Parent=FBgn0003380.1.mrna1;Target=FBgn0003380.1 1 161 +
Chr1	stalkie_big_nohaplotig	exon	146257664	146257787	100	-	.	ID=FBgn0003380.1.mrna1.exon2;Name=FBgn0003380.1;Parent=FBgn0003380.1.mrna1;Target=FBgn0003380.1 162 285 +
Chr1	stalkie_big_nohaplotig	exon	146256131	146256299	100	-	.	ID=FBgn0003380.1.mrna1.exon3;Name=FBgn0003380.1;Parent=FBgn0003380.1.mrna1;Target=FBgn0003380.1 286 454 +
Chr1	stalkie_big_nohaplotig	exon	146255819	146255915	100	-	.	ID=FBgn0003380.1.mrna1.exon4;Name=FBgn0003380.1;Parent=FBgn0003380.1.mrna1;Target=FBgn0003380.1 455 551 +
Chr1	stalkie_big_nohaplotig	exon	146254470	146254665	100	-	.	ID=FBgn0003380.1.mrna1.exon5;Name=FBgn0003380.1;Parent=FBgn0003380.1.mrna1;Target=FBgn0003380.1 552 747 +
Chr1	stalkie_big_nohaplotig	exon	146252365	146252486	100	-	.	ID=FBgn0003380.1.mrna1.exon6;Name=FBgn0003380.1;Parent=FBgn0003380.1.mrna1;Target=FBgn0003380.1 748 869 +
Chr1	stalkie_big_nohaplotig	exon	146251032	146251185	100	-	.	ID=FBgn0003380.1.mrna1.exon7;Name=FBgn0003380.1;Parent=FBgn0003380.1.mrna1;Target=FBgn0003380.1 870 1023 +
Chr1	stalkie_big_nohaplotig	exon	146250492	146250663	99	-	.	ID=FBgn0003380.1.mrna1.exon8;Name=FBgn0003380.1;Parent=FBgn0003380.1.mrna1;Target=FBgn0003380.1 1024 1195 +
Chr1	stalkie_big_nohaplotig	exon	146240852	146240981	100	-	.	ID=FBgn0003380.1.mrna1.exon9;Name=FBgn0003380.1;Parent=FBgn0003380.1.mrna1;Target=FBgn0003380.1 1196 1325 +
Chr1	stalkie_big_nohaplotig	exon	146236014	146236204	100	-	.	ID=FBgn0003380.1.mrna1.exon10;Name=FBgn0003380.1;Parent=FBgn0003380.1.mrna1;Target=FBgn0003380.1 1326 1516 +
Chr1	stalkie_big_nohaplotig	exon	146235592	146235761	100	-	.	ID=FBgn0003380.1.mrna1.exon11;Name=FBgn0003380.1;Parent=FBgn0003380.1.mrna1;Target=FBgn0003380.1 1517 1686 +
Chr1	stalkie_big_nohaplotig	CDS	146526020	146526180	100	-	0	ID=FBgn0003380.1.mrna1.cds1;Name=FBgn0003380.1;Parent=FBgn0003380.1.mrna1;Target=FBgn0003380.1 1 161 +
Chr1	stalkie_big_nohaplotig	CDS	146257664	146257787	100	-	2	ID=FBgn0003380.1.mrna1.cds2;Name=FBgn0003380.1;Parent=FBgn0003380.1.mrna1;Target=FBgn0003380.1 162 285 +
Chr1	stalkie_big_nohaplotig	CDS	146256131	146256299	100	-	0	ID=FBgn0003380.1.mrna1.cds3;Name=FBgn0003380.1;Parent=FBgn0003380.1.mrna1;Target=FBgn0003380.1 286 454 +
Chr1	stalkie_big_nohaplotig	CDS	146255819	146255915	100	-	1	ID=FBgn0003380.1.mrna1.cds4;Name=FBgn0003380.1;Parent=FBgn0003380.1.mrna1;Target=FBgn0003380.1 455 551 +
Chr1	stalkie_big_nohaplotig	CDS	146254470	146254665	100	-	2	ID=FBgn0003380.1.mrna1.cds5;Name=FBgn0003380.1;Parent=FBgn0003380.1.mrna1;Target=FBgn0003380.1 552 747 +
Chr1	stalkie_big_nohaplotig	CDS	146252365	146252486	100	-	0	ID=FBgn0003380.1.mrna1.cds6;Name=FBgn0003380.1;Parent=FBgn0003380.1.mrna1;Target=FBgn0003380.1 748 869 +
Chr1	stalkie_big_nohaplotig	CDS	146251032	146251185	100	-	2	ID=FBgn0003380.1.mrna1.cds7;Name=FBgn0003380.1;Parent=FBgn0003380.1.mrna1;Target=FBgn0003380.1 870 1023 +
Chr1	stalkie_big_nohaplotig	CDS	146250492	146250663	99	-	0	ID=FBgn0003380.1.mrna1.cds8;Name=FBgn0003380.1;Parent=FBgn0003380.1.mrna1;Target=FBgn0003380.1 1024 1195 +
Chr1	stalkie_big_nohaplotig	CDS	146240852	146240981	100	-	1	ID=FBgn0003380.1.mrna1.cds9;Name=FBgn0003380.1;Parent=FBgn0003380.1.mrna1;Target=FBgn0003380.1 1196 1325 +
Chr1	stalkie_big_nohaplotig	CDS	146236014	146236204	100	-	2	ID=FBgn0003380.1.mrna1.cds10;Name=FBgn0003380.1;Parent=FBgn0003380.1.mrna1;Target=FBgn0003380.1 1326 1516 +
Chr1	stalkie_big_nohaplotig	CDS	146235592	146235761	100	-	1	ID=FBgn0003380.1.mrna1.cds11;Name=FBgn0003380.1;Parent=FBgn0003380.1.mrna1;Target=FBgn0003380.1 1517 1686 +
Chr2	stalkie_big_nohaplotig	mRNA	139367649	139375246	.	+	.	ID=ORF70.mrna1;Name=ORF70;Parent=ORF70.path1;Dir=sensecoverage=100.0;identity=99.4;matches=3270;mismatches=0;indels=21;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	139367649	139367695	100	+	.	ID=ORF70.mrna1.exon1;Name=ORF70;Parent=ORF70.mrna1;Target=ORF70 1 47 +
Chr2	stalkie_big_nohaplotig	exon	139371539	139372976	98	+	.	ID=ORF70.mrna1.exon2;Name=ORF70;Parent=ORF70.mrna1;Target=ORF70 48 1464 +
Chr2	stalkie_big_nohaplotig	exon	139373382	139374423	100	+	.	ID=ORF70.mrna1.exon3;Name=ORF70;Parent=ORF70.mrna1;Target=ORF70 1465 2506 +
Chr2	stalkie_big_nohaplotig	exon	139374483	139375246	100	+	.	ID=ORF70.mrna1.exon4;Name=ORF70;Parent=ORF70.mrna1;Target=ORF70 2507 3270 +
Chr2	stalkie_big_nohaplotig	CDS	139367649	139367695	100	+	0	ID=ORF70.mrna1.cds1;Name=ORF70;Parent=ORF70.mrna1;Target=ORF70 1 47 +
Chr2	stalkie_big_nohaplotig	CDS	139371539	139372976	98	+	2	ID=ORF70.mrna1.cds2;Name=ORF70;Parent=ORF70.mrna1;Target=ORF70 48 1464 +
Chr2	stalkie_big_nohaplotig	CDS	139373382	139374423	100	+	0	ID=ORF70.mrna1.cds3;Name=ORF70;Parent=ORF70.mrna1;Target=ORF70 1465 2506 +
Chr2	stalkie_big_nohaplotig	CDS	139374483	139375246	100	+	1	ID=ORF70.mrna1.cds4;Name=ORF70;Parent=ORF70.mrna1;Target=ORF70 2507 3270 +
Chr2	stalkie_big_nohaplotig	mRNA	134324018	134343523	.	+	.	ID=FBgn0039804.1.mrna1;Name=FBgn0039804.1;Parent=FBgn0039804.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=2606;mismatches=13;indels=6;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	134324018	134324149	100	+	.	ID=FBgn0039804.1.mrna1.exon1;Name=FBgn0039804.1;Parent=FBgn0039804.1.mrna1;Target=FBgn0039804.1 1 132 +
Chr2	stalkie_big_nohaplotig	exon	134339665	134341774	99	+	.	ID=FBgn0039804.1.mrna1.exon2;Name=FBgn0039804.1;Parent=FBgn0039804.1.mrna1;Target=FBgn0039804.1 133 2242 +
Chr2	stalkie_big_nohaplotig	exon	134343144	134343523	100	+	.	ID=FBgn0039804.1.mrna1.exon3;Name=FBgn0039804.1;Parent=FBgn0039804.1.mrna1;Target=FBgn0039804.1 2243 2622 +
Chr2	stalkie_big_nohaplotig	CDS	134324018	134324149	100	+	0	ID=FBgn0039804.1.mrna1.cds1;Name=FBgn0039804.1;Parent=FBgn0039804.1.mrna1;Target=FBgn0039804.1 1 132 +
Chr2	stalkie_big_nohaplotig	CDS	134339665	134341774	99	+	0	ID=FBgn0039804.1.mrna1.cds2;Name=FBgn0039804.1;Parent=FBgn0039804.1.mrna1;Target=FBgn0039804.1 133 2242 +
Chr2	stalkie_big_nohaplotig	CDS	134343144	134343523	100	+	1	ID=FBgn0039804.1.mrna1.cds3;Name=FBgn0039804.1;Parent=FBgn0039804.1.mrna1;Target=FBgn0039804.1 2243 2622 +
Chr2	stalkie_big_nohaplotig	mRNA	84721397	84765458	.	-	.	ID=FBgn0263416.1.mrna1;Name=FBgn0263416.1;Parent=FBgn0263416.1.path1;Dir=sensecoverage=84.9;identity=99.7;matches=1734;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	84765222	84765458	100	-	.	ID=FBgn0263416.1.mrna1.exon1;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 269 505 +
Chr2	stalkie_big_nohaplotig	exon	84762618	84762761	100	-	.	ID=FBgn0263416.1.mrna1.exon2;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 506 649 +
Chr2	stalkie_big_nohaplotig	exon	84762238	84762432	99	-	.	ID=FBgn0263416.1.mrna1.exon3;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 650 844 +
Chr2	stalkie_big_nohaplotig	exon	84759729	84759877	100	-	.	ID=FBgn0263416.1.mrna1.exon4;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 845 993 +
Chr2	stalkie_big_nohaplotig	exon	84759419	84759530	100	-	.	ID=FBgn0263416.1.mrna1.exon5;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 994 1105 +
Chr2	stalkie_big_nohaplotig	exon	84759189	84759309	99	-	.	ID=FBgn0263416.1.mrna1.exon6;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 1106 1226 +
Chr2	stalkie_big_nohaplotig	exon	84746302	84746465	99	-	.	ID=FBgn0263416.1.mrna1.exon7;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 1227 1390 +
Chr2	stalkie_big_nohaplotig	exon	84742637	84742795	100	-	.	ID=FBgn0263416.1.mrna1.exon8;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 1391 1549 +
Chr2	stalkie_big_nohaplotig	exon	84734720	84734893	100	-	.	ID=FBgn0263416.1.mrna1.exon9;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 1550 1723 +
Chr2	stalkie_big_nohaplotig	exon	84731320	84731433	99	-	.	ID=FBgn0263416.1.mrna1.exon10;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 1724 1837 +
Chr2	stalkie_big_nohaplotig	exon	84723970	84724003	100	-	.	ID=FBgn0263416.1.mrna1.exon11;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 1838 1871 +
Chr2	stalkie_big_nohaplotig	exon	84721397	84721532	99	-	.	ID=FBgn0263416.1.mrna1.exon12;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 1872 2007 +
Chr2	stalkie_big_nohaplotig	CDS	84765222	84765456	100	-	0	ID=FBgn0263416.1.mrna1.cds1;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 271 505 +
Chr2	stalkie_big_nohaplotig	CDS	84762618	84762761	100	-	1	ID=FBgn0263416.1.mrna1.cds2;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 506 649 +
Chr2	stalkie_big_nohaplotig	CDS	84762238	84762432	99	-	1	ID=FBgn0263416.1.mrna1.cds3;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 650 844 +
Chr2	stalkie_big_nohaplotig	CDS	84759729	84759877	100	-	1	ID=FBgn0263416.1.mrna1.cds4;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 845 993 +
Chr2	stalkie_big_nohaplotig	CDS	84759419	84759530	100	-	0	ID=FBgn0263416.1.mrna1.cds5;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 994 1105 +
Chr2	stalkie_big_nohaplotig	CDS	84759189	84759309	99	-	1	ID=FBgn0263416.1.mrna1.cds6;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 1106 1226 +
Chr2	stalkie_big_nohaplotig	CDS	84746302	84746465	99	-	2	ID=FBgn0263416.1.mrna1.cds7;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 1227 1390 +
Chr2	stalkie_big_nohaplotig	CDS	84742637	84742795	100	-	1	ID=FBgn0263416.1.mrna1.cds8;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 1391 1549 +
Chr2	stalkie_big_nohaplotig	CDS	84734720	84734893	100	-	1	ID=FBgn0263416.1.mrna1.cds9;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 1550 1723 +
Chr2	stalkie_big_nohaplotig	CDS	84731320	84731433	99	-	1	ID=FBgn0263416.1.mrna1.cds10;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 1724 1837 +
Chr2	stalkie_big_nohaplotig	CDS	84723970	84724003	100	-	1	ID=FBgn0263416.1.mrna1.cds11;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 1838 1871 +
Chr2	stalkie_big_nohaplotig	CDS	84721397	84721532	99	-	2	ID=FBgn0263416.1.mrna1.cds12;Name=FBgn0263416.1;Parent=FBgn0263416.1.mrna1;Target=FBgn0263416.1 1872 2007 +
Chr1	stalkie_big_nohaplotig	mRNA	17228534	17235454	.	-	.	ID=FBgn0036574.1.mrna1;Name=FBgn0036574.1;Parent=FBgn0036574.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=3864;mismatches=21;indels=6;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	17234625	17235454	99	-	.	ID=FBgn0036574.1.mrna1.exon1;Name=FBgn0036574.1;Parent=FBgn0036574.1.mrna1;Target=FBgn0036574.1 1 830 +
Chr1	stalkie_big_nohaplotig	exon	17232880	17234554	98	-	.	ID=FBgn0036574.1.mrna1.exon2;Name=FBgn0036574.1;Parent=FBgn0036574.1.mrna1;Target=FBgn0036574.1 831 2511 +
Chr1	stalkie_big_nohaplotig	exon	17230466	17231595	99	-	.	ID=FBgn0036574.1.mrna1.exon3;Name=FBgn0036574.1;Parent=FBgn0036574.1.mrna1;Target=FBgn0036574.1 2512 3641 +
Chr1	stalkie_big_nohaplotig	exon	17228534	17228783	99	-	.	ID=FBgn0036574.1.mrna1.exon4;Name=FBgn0036574.1;Parent=FBgn0036574.1.mrna1;Target=FBgn0036574.1 3642 3891 +
Chr1	stalkie_big_nohaplotig	CDS	17234625	17235454	99	-	0	ID=FBgn0036574.1.mrna1.cds1;Name=FBgn0036574.1;Parent=FBgn0036574.1.mrna1;Target=FBgn0036574.1 1 830 +
Chr1	stalkie_big_nohaplotig	CDS	17232880	17234554	98	-	2	ID=FBgn0036574.1.mrna1.cds2;Name=FBgn0036574.1;Parent=FBgn0036574.1.mrna1;Target=FBgn0036574.1 831 2511 +
Chr1	stalkie_big_nohaplotig	CDS	17230466	17231595	99	-	0	ID=FBgn0036574.1.mrna1.cds3;Name=FBgn0036574.1;Parent=FBgn0036574.1.mrna1;Target=FBgn0036574.1 2512 3641 +
Chr1	stalkie_big_nohaplotig	CDS	17228534	17228783	99	-	2	ID=FBgn0036574.1.mrna1.cds4;Name=FBgn0036574.1;Parent=FBgn0036574.1.mrna1;Target=FBgn0036574.1 3642 3891 +
Chr1	stalkie_big_nohaplotig	mRNA	130261066	130262496	.	-	.	ID=ORF1148.mrna1;Name=ORF1148;Parent=ORF1148.path1;Dir=indeterminatecoverage=95.0;identity=97.9;matches=1128;mismatches=15;indels=9;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	130262288	130262496	99	-	.	ID=ORF1148.mrna1.exon1;Name=ORF1148;Parent=ORF1148.mrna1;Target=ORF1148 269 61 .
Chr1	stalkie_big_nohaplotig	exon	130261749	130262113	94	-	.	ID=ORF1148.mrna1.exon2;Name=ORF1148;Parent=ORF1148.mrna1;Target=ORF1148 643 270 .
Chr1	stalkie_big_nohaplotig	exon	130261066	130261634	99	-	.	ID=ORF1148.mrna1.exon3;Name=ORF1148;Parent=ORF1148.mrna1;Target=ORF1148 1212 644 .
Chr1	stalkie_big_nohaplotig	CDS	130262288	130262496	99	-	0	ID=ORF1148.mrna1.cds1;Name=ORF1148;Parent=ORF1148.mrna1;Target=ORF1148 269 61 .
Chr1	stalkie_big_nohaplotig	CDS	130261749	130262113	94	-	2	ID=ORF1148.mrna1.cds2;Name=ORF1148;Parent=ORF1148.mrna1;Target=ORF1148 643 270 .
Chr1	stalkie_big_nohaplotig	CDS	130261066	130261634	99	-	1	ID=ORF1148.mrna1.cds3;Name=ORF1148;Parent=ORF1148.mrna1;Target=ORF1148 1212 644 .
Chr2	stalkie_big_nohaplotig	mRNA	37450500	37451579	.	-	.	ID=FBgn0034921.1.mrna1;Name=FBgn0034921.1;Parent=FBgn0034921.1.path1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1078;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	37450500	37451579	99	-	.	ID=FBgn0034921.1.mrna1.exon1;Name=FBgn0034921.1;Parent=FBgn0034921.1.mrna1;Target=FBgn0034921.1 1080 1 .
Chr2	stalkie_big_nohaplotig	CDS	37450500	37451579	99	-	0	ID=FBgn0034921.1.mrna1.cds1;Name=FBgn0034921.1;Parent=FBgn0034921.1.mrna1;Target=FBgn0034921.1 1080 1 .
ChrX	stalkie_big_nohaplotig	mRNA	5208564	5209433	.	+	.	ID=ORF2369.mrna1;Name=ORF2369;Parent=ORF2369.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=869;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	5208564	5209433	99	+	.	ID=ORF2369.mrna1.exon1;Name=ORF2369;Parent=ORF2369.mrna1;Target=ORF2369 870 1 .
ChrX	stalkie_big_nohaplotig	CDS	5208564	5209433	99	+	0	ID=ORF2369.mrna1.cds1;Name=ORF2369;Parent=ORF2369.mrna1;Target=ORF2369 870 1 .
Chr1	stalkie_big_nohaplotig	mRNA	173960145	173961030	.	+	.	ID=ORF1762.mrna1;Name=ORF1762;Parent=ORF1762.path1;Dir=indeterminatecoverage=88.4;identity=98.0;matches=868;mismatches=18;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	173960145	173961030	97	+	.	ID=ORF1762.mrna1.exon1;Name=ORF1762;Parent=ORF1762.mrna1;Target=ORF1762 886 1 .
Chr1	stalkie_big_nohaplotig	CDS	173960145	173961029	97	+	0	ID=ORF1762.mrna1.cds1;Name=ORF1762;Parent=ORF1762.mrna1;Target=ORF1762 885 1 .
Chr2	stalkie_big_nohaplotig	mRNA	162809704	162810816	.	-	.	ID=FBgn0051089.1.mrna1;Name=FBgn0051089.1;Parent=FBgn0051089.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1047;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	162810163	162810816	99	-	.	ID=FBgn0051089.1.mrna1.exon1;Name=FBgn0051089.1;Parent=FBgn0051089.1.mrna1;Target=FBgn0051089.1 1 654 +
Chr2	stalkie_big_nohaplotig	exon	162809704	162810099	100	-	.	ID=FBgn0051089.1.mrna1.exon2;Name=FBgn0051089.1;Parent=FBgn0051089.1.mrna1;Target=FBgn0051089.1 655 1050 +
Chr2	stalkie_big_nohaplotig	CDS	162810163	162810816	99	-	0	ID=FBgn0051089.1.mrna1.cds1;Name=FBgn0051089.1;Parent=FBgn0051089.1.mrna1;Target=FBgn0051089.1 1 654 +
Chr2	stalkie_big_nohaplotig	CDS	162809704	162810099	100	-	0	ID=FBgn0051089.1.mrna1.cds2;Name=FBgn0051089.1;Parent=FBgn0051089.1.mrna1;Target=FBgn0051089.1 655 1050 +
Chr1	stalkie_big_nohaplotig	mRNA	17493226	17494358	.	+	.	ID=FBgn0031876.1.mrna1;Name=FBgn0031876.1;Parent=FBgn0031876.1.path1;Dir=sensecoverage=100.0;identity=99.4;matches=993;mismatches=6;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	17493226	17493483	99	+	.	ID=FBgn0031876.1.mrna1.exon1;Name=FBgn0031876.1;Parent=FBgn0031876.1.mrna1;Target=FBgn0031876.1 1 258 +
Chr1	stalkie_big_nohaplotig	exon	17493549	17493683	100	+	.	ID=FBgn0031876.1.mrna1.exon2;Name=FBgn0031876.1;Parent=FBgn0031876.1.mrna1;Target=FBgn0031876.1 259 393 +
Chr1	stalkie_big_nohaplotig	exon	17493753	17494358	99	+	.	ID=FBgn0031876.1.mrna1.exon3;Name=FBgn0031876.1;Parent=FBgn0031876.1.mrna1;Target=FBgn0031876.1 394 999 +
Chr1	stalkie_big_nohaplotig	CDS	17493226	17493483	99	+	0	ID=FBgn0031876.1.mrna1.cds1;Name=FBgn0031876.1;Parent=FBgn0031876.1.mrna1;Target=FBgn0031876.1 1 258 +
Chr1	stalkie_big_nohaplotig	CDS	17493549	17493683	100	+	0	ID=FBgn0031876.1.mrna1.cds2;Name=FBgn0031876.1;Parent=FBgn0031876.1.mrna1;Target=FBgn0031876.1 259 393 +
Chr1	stalkie_big_nohaplotig	CDS	17493753	17494358	99	+	0	ID=FBgn0031876.1.mrna1.cds3;Name=FBgn0031876.1;Parent=FBgn0031876.1.mrna1;Target=FBgn0031876.1 394 999 +
Chr1	stalkie_big_nohaplotig	mRNA	126397220	126398973	.	-	.	ID=FBgn0262534.2.mrna5;Name=FBgn0262534.2;Parent=FBgn0262534.2.path5;Dir=sensecoverage=100.0;identity=99.4;matches=1056;mismatches=6;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	126398840	126398973	98	-	.	ID=FBgn0262534.2.mrna5.exon1;Name=FBgn0262534.2;Parent=FBgn0262534.2.mrna5;Target=FBgn0262534.2 1 134 +
Chr1	stalkie_big_nohaplotig	exon	126398438	126398785	99	-	.	ID=FBgn0262534.2.mrna5.exon2;Name=FBgn0262534.2;Parent=FBgn0262534.2.mrna5;Target=FBgn0262534.2 135 482 +
Chr1	stalkie_big_nohaplotig	exon	126397779	126397857	100	-	.	ID=FBgn0262534.2.mrna5.exon3;Name=FBgn0262534.2;Parent=FBgn0262534.2.mrna5;Target=FBgn0262534.2 483 561 +
Chr1	stalkie_big_nohaplotig	exon	126397220	126397720	99	-	.	ID=FBgn0262534.2.mrna5.exon4;Name=FBgn0262534.2;Parent=FBgn0262534.2.mrna5;Target=FBgn0262534.2 562 1062 +
Chr1	stalkie_big_nohaplotig	CDS	126398840	126398973	98	-	0	ID=FBgn0262534.2.mrna5.cds1;Name=FBgn0262534.2;Parent=FBgn0262534.2.mrna5;Target=FBgn0262534.2 1 134 +
Chr1	stalkie_big_nohaplotig	CDS	126398438	126398785	99	-	2	ID=FBgn0262534.2.mrna5.cds2;Name=FBgn0262534.2;Parent=FBgn0262534.2.mrna5;Target=FBgn0262534.2 135 482 +
Chr1	stalkie_big_nohaplotig	CDS	126397779	126397857	100	-	2	ID=FBgn0262534.2.mrna5.cds3;Name=FBgn0262534.2;Parent=FBgn0262534.2.mrna5;Target=FBgn0262534.2 483 561 +
Chr1	stalkie_big_nohaplotig	CDS	126397220	126397720	99	-	0	ID=FBgn0262534.2.mrna5.cds4;Name=FBgn0262534.2;Parent=FBgn0262534.2.mrna5;Target=FBgn0262534.2 562 1062 +
Chr2	stalkie_big_nohaplotig	mRNA	159747922	159748343	.	+	.	ID=FBgn0025638.1.mrna1;Name=FBgn0025638.1;Parent=FBgn0025638.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=289;mismatches=1;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	159747922	159748013	97	+	.	ID=FBgn0025638.1.mrna1.exon1;Name=FBgn0025638.1;Parent=FBgn0025638.1.mrna1;Target=FBgn0025638.1 1 93 +
Chr2	stalkie_big_nohaplotig	exon	159748087	159748114	100	+	.	ID=FBgn0025638.1.mrna1.exon2;Name=FBgn0025638.1;Parent=FBgn0025638.1.mrna1;Target=FBgn0025638.1 94 121 +
Chr2	stalkie_big_nohaplotig	exon	159748174	159748343	100	+	.	ID=FBgn0025638.1.mrna1.exon3;Name=FBgn0025638.1;Parent=FBgn0025638.1.mrna1;Target=FBgn0025638.1 122 291 +
Chr2	stalkie_big_nohaplotig	CDS	159747924	159747946	91	+	0	ID=FBgn0025638.1.mrna1.cds1;Name=FBgn0025638.1;Parent=FBgn0025638.1.mrna1;Target=FBgn0025638.1 3 26 +
ChrX	stalkie_big_nohaplotig	mRNA	20504293	20505169	.	+	.	ID=ORF2240.mrna2;Name=ORF2240;Parent=ORF2240.path2;Dir=indeterminatecoverage=98.1;identity=98.9;matches=868;mismatches=8;indels=2;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	20504293	20505169	98	+	.	ID=ORF2240.mrna2.exon1;Name=ORF2240;Parent=ORF2240.mrna2;Target=ORF2240 894 18 .
ChrX	stalkie_big_nohaplotig	CDS	20504294	20505169	98	+	0	ID=ORF2240.mrna2.cds1;Name=ORF2240;Parent=ORF2240.mrna2;Target=ORF2240 894 19 .
Chr1	stalkie_big_nohaplotig	mRNA	22069333	22082126	.	+	.	ID=FBgn0035397.1.mrna2;Name=FBgn0035397.1;Parent=FBgn0035397.1.path2;Dir=sensecoverage=96.1;identity=99.9;matches=2084;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	22069333	22069409	100	+	.	ID=FBgn0035397.1.mrna2.exon1;Name=FBgn0035397.1;Parent=FBgn0035397.1.mrna2;Target=FBgn0035397.1 86 162 +
Chr1	stalkie_big_nohaplotig	exon	22076235	22076693	99	+	.	ID=FBgn0035397.1.mrna2.exon2;Name=FBgn0035397.1;Parent=FBgn0035397.1.mrna2;Target=FBgn0035397.1 163 621 +
Chr1	stalkie_big_nohaplotig	exon	22076837	22077305	99	+	.	ID=FBgn0035397.1.mrna2.exon3;Name=FBgn0035397.1;Parent=FBgn0035397.1.mrna2;Target=FBgn0035397.1 622 1090 +
Chr1	stalkie_big_nohaplotig	exon	22077379	22077495	100	+	.	ID=FBgn0035397.1.mrna2.exon4;Name=FBgn0035397.1;Parent=FBgn0035397.1.mrna2;Target=FBgn0035397.1 1091 1207 +
Chr1	stalkie_big_nohaplotig	exon	22077806	22077923	100	+	.	ID=FBgn0035397.1.mrna2.exon5;Name=FBgn0035397.1;Parent=FBgn0035397.1.mrna2;Target=FBgn0035397.1 1208 1325 +
Chr1	stalkie_big_nohaplotig	exon	22079031	22079150	100	+	.	ID=FBgn0035397.1.mrna2.exon6;Name=FBgn0035397.1;Parent=FBgn0035397.1.mrna2;Target=FBgn0035397.1 1326 1445 +
Chr1	stalkie_big_nohaplotig	exon	22079213	22079342	100	+	.	ID=FBgn0035397.1.mrna2.exon7;Name=FBgn0035397.1;Parent=FBgn0035397.1.mrna2;Target=FBgn0035397.1 1446 1575 +
Chr1	stalkie_big_nohaplotig	exon	22079417	22079553	100	+	.	ID=FBgn0035397.1.mrna2.exon8;Name=FBgn0035397.1;Parent=FBgn0035397.1.mrna2;Target=FBgn0035397.1 1576 1712 +
Chr1	stalkie_big_nohaplotig	exon	22079609	22079797	100	+	.	ID=FBgn0035397.1.mrna2.exon9;Name=FBgn0035397.1;Parent=FBgn0035397.1.mrna2;Target=FBgn0035397.1 1713 1901 +
Chr1	stalkie_big_nohaplotig	exon	22079967	22080129	100	+	.	ID=FBgn0035397.1.mrna2.exon10;Name=FBgn0035397.1;Parent=FBgn0035397.1.mrna2;Target=FBgn0035397.1 1902 2064 +
Chr1	stalkie_big_nohaplotig	exon	22082019	22082126	100	+	.	ID=FBgn0035397.1.mrna2.exon11;Name=FBgn0035397.1;Parent=FBgn0035397.1.mrna2;Target=FBgn0035397.1 2065 2172 +
Chr1	stalkie_big_nohaplotig	CDS	22069333	22069409	100	+	1	ID=FBgn0035397.1.mrna2.cds1;Name=FBgn0035397.1;Parent=FBgn0035397.1.mrna2;Target=FBgn0035397.1 86 162 +
Chr1	stalkie_big_nohaplotig	CDS	22076235	22076693	99	+	0	ID=FBgn0035397.1.mrna2.cds2;Name=FBgn0035397.1;Parent=FBgn0035397.1.mrna2;Target=FBgn0035397.1 163 621 +
Chr1	stalkie_big_nohaplotig	CDS	22076837	22077305	99	+	0	ID=FBgn0035397.1.mrna2.cds3;Name=FBgn0035397.1;Parent=FBgn0035397.1.mrna2;Target=FBgn0035397.1 622 1090 +
Chr1	stalkie_big_nohaplotig	CDS	22077379	22077495	100	+	1	ID=FBgn0035397.1.mrna2.cds4;Name=FBgn0035397.1;Parent=FBgn0035397.1.mrna2;Target=FBgn0035397.1 1091 1207 +
Chr1	stalkie_big_nohaplotig	CDS	22077806	22077923	100	+	1	ID=FBgn0035397.1.mrna2.cds5;Name=FBgn0035397.1;Parent=FBgn0035397.1.mrna2;Target=FBgn0035397.1 1208 1325 +
Chr1	stalkie_big_nohaplotig	CDS	22079031	22079150	100	+	2	ID=FBgn0035397.1.mrna2.cds6;Name=FBgn0035397.1;Parent=FBgn0035397.1.mrna2;Target=FBgn0035397.1 1326 1445 +
Chr1	stalkie_big_nohaplotig	CDS	22079213	22079342	100	+	2	ID=FBgn0035397.1.mrna2.cds7;Name=FBgn0035397.1;Parent=FBgn0035397.1.mrna2;Target=FBgn0035397.1 1446 1575 +
Chr1	stalkie_big_nohaplotig	CDS	22079417	22079553	100	+	0	ID=FBgn0035397.1.mrna2.cds8;Name=FBgn0035397.1;Parent=FBgn0035397.1.mrna2;Target=FBgn0035397.1 1576 1712 +
Chr1	stalkie_big_nohaplotig	CDS	22079609	22079797	100	+	2	ID=FBgn0035397.1.mrna2.cds9;Name=FBgn0035397.1;Parent=FBgn0035397.1.mrna2;Target=FBgn0035397.1 1713 1901 +
Chr1	stalkie_big_nohaplotig	CDS	22079967	22080129	100	+	2	ID=FBgn0035397.1.mrna2.cds10;Name=FBgn0035397.1;Parent=FBgn0035397.1.mrna2;Target=FBgn0035397.1 1902 2064 +
Chr1	stalkie_big_nohaplotig	CDS	22082019	22082126	100	+	0	ID=FBgn0035397.1.mrna2.cds11;Name=FBgn0035397.1;Parent=FBgn0035397.1.mrna2;Target=FBgn0035397.1 2065 2172 +
Chr1	stalkie_big_nohaplotig	mRNA	22116005	22121065	.	-	.	ID=FBgn0035871.1.mrna1;Name=FBgn0035871.1;Parent=FBgn0035871.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=738;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	22120974	22121065	100	-	.	ID=FBgn0035871.1.mrna1.exon1;Name=FBgn0035871.1;Parent=FBgn0035871.1.mrna1;Target=FBgn0035871.1 1 92 +
Chr1	stalkie_big_nohaplotig	exon	22116434	22116887	100	-	.	ID=FBgn0035871.1.mrna1.exon2;Name=FBgn0035871.1;Parent=FBgn0035871.1.mrna1;Target=FBgn0035871.1 93 546 +
Chr1	stalkie_big_nohaplotig	exon	22116194	22116364	100	-	.	ID=FBgn0035871.1.mrna1.exon3;Name=FBgn0035871.1;Parent=FBgn0035871.1.mrna1;Target=FBgn0035871.1 547 717 +
Chr1	stalkie_big_nohaplotig	exon	22116005	22116025	100	-	.	ID=FBgn0035871.1.mrna1.exon4;Name=FBgn0035871.1;Parent=FBgn0035871.1.mrna1;Target=FBgn0035871.1 718 738 +
Chr1	stalkie_big_nohaplotig	CDS	22120974	22121065	100	-	0	ID=FBgn0035871.1.mrna1.cds1;Name=FBgn0035871.1;Parent=FBgn0035871.1.mrna1;Target=FBgn0035871.1 1 92 +
Chr1	stalkie_big_nohaplotig	CDS	22116434	22116887	100	-	2	ID=FBgn0035871.1.mrna1.cds2;Name=FBgn0035871.1;Parent=FBgn0035871.1.mrna1;Target=FBgn0035871.1 93 546 +
Chr1	stalkie_big_nohaplotig	CDS	22116194	22116364	100	-	0	ID=FBgn0035871.1.mrna1.cds3;Name=FBgn0035871.1;Parent=FBgn0035871.1.mrna1;Target=FBgn0035871.1 547 717 +
Chr1	stalkie_big_nohaplotig	CDS	22116005	22116025	100	-	0	ID=FBgn0035871.1.mrna1.cds4;Name=FBgn0035871.1;Parent=FBgn0035871.1.mrna1;Target=FBgn0035871.1 718 738 +
Chr1	stalkie_big_nohaplotig	mRNA	22085375	22087892	.	-	.	ID=FBgn0264302.1.mrna1;Name=FBgn0264302.1;Parent=FBgn0264302.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=474;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	22087676	22087892	100	-	.	ID=FBgn0264302.1.mrna1.exon1;Name=FBgn0264302.1;Parent=FBgn0264302.1.mrna1;Target=FBgn0264302.1 1 217 +
Chr1	stalkie_big_nohaplotig	exon	22087512	22087612	100	-	.	ID=FBgn0264302.1.mrna1.exon2;Name=FBgn0264302.1;Parent=FBgn0264302.1.mrna1;Target=FBgn0264302.1 218 318 +
Chr1	stalkie_big_nohaplotig	exon	22085375	22085530	100	-	.	ID=FBgn0264302.1.mrna1.exon3;Name=FBgn0264302.1;Parent=FBgn0264302.1.mrna1;Target=FBgn0264302.1 319 474 +
Chr1	stalkie_big_nohaplotig	CDS	22087676	22087892	100	-	0	ID=FBgn0264302.1.mrna1.cds1;Name=FBgn0264302.1;Parent=FBgn0264302.1.mrna1;Target=FBgn0264302.1 1 217 +
Chr1	stalkie_big_nohaplotig	CDS	22087512	22087612	100	-	1	ID=FBgn0264302.1.mrna1.cds2;Name=FBgn0264302.1;Parent=FBgn0264302.1.mrna1;Target=FBgn0264302.1 218 318 +
Chr1	stalkie_big_nohaplotig	CDS	22085375	22085530	100	-	0	ID=FBgn0264302.1.mrna1.cds3;Name=FBgn0264302.1;Parent=FBgn0264302.1.mrna1;Target=FBgn0264302.1 319 474 +
ChrX	stalkie_big_nohaplotig	mRNA	77935865	77936632	.	-	.	ID=ORF3105.mrna1;Name=ORF3105;Parent=ORF3105.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=768;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	77935865	77936632	100	-	.	ID=ORF3105.mrna1.exon1;Name=ORF3105;Parent=ORF3105.mrna1;Target=ORF3105 768 1 .
ChrX	stalkie_big_nohaplotig	CDS	77935865	77936632	100	-	0	ID=ORF3105.mrna1.cds1;Name=ORF3105;Parent=ORF3105.mrna1;Target=ORF3105 768 1 .
ChrX	stalkie_big_nohaplotig	mRNA	38889833	38891244	.	+	.	ID=ORF2742.mrna1;Name=ORF2742;Parent=ORF2742.path1;Dir=sensecoverage=100.0;identity=99.0;matches=805;mismatches=8;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	38889833	38889911	100	+	.	ID=ORF2742.mrna1.exon1;Name=ORF2742;Parent=ORF2742.mrna1;Target=ORF2742 1 79 +
ChrX	stalkie_big_nohaplotig	exon	38889984	38890175	98	+	.	ID=ORF2742.mrna1.exon2;Name=ORF2742;Parent=ORF2742.mrna1;Target=ORF2742 80 271 +
ChrX	stalkie_big_nohaplotig	exon	38890238	38890408	100	+	.	ID=ORF2742.mrna1.exon3;Name=ORF2742;Parent=ORF2742.mrna1;Target=ORF2742 272 442 +
ChrX	stalkie_big_nohaplotig	exon	38890494	38890568	100	+	.	ID=ORF2742.mrna1.exon4;Name=ORF2742;Parent=ORF2742.mrna1;Target=ORF2742 443 517 +
ChrX	stalkie_big_nohaplotig	exon	38890706	38890786	98	+	.	ID=ORF2742.mrna1.exon5;Name=ORF2742;Parent=ORF2742.mrna1;Target=ORF2742 518 598 +
ChrX	stalkie_big_nohaplotig	exon	38890967	38891112	97	+	.	ID=ORF2742.mrna1.exon6;Name=ORF2742;Parent=ORF2742.mrna1;Target=ORF2742 599 744 +
ChrX	stalkie_big_nohaplotig	exon	38891176	38891244	100	+	.	ID=ORF2742.mrna1.exon7;Name=ORF2742;Parent=ORF2742.mrna1;Target=ORF2742 745 813 +
ChrX	stalkie_big_nohaplotig	CDS	38889833	38889911	100	+	0	ID=ORF2742.mrna1.cds1;Name=ORF2742;Parent=ORF2742.mrna1;Target=ORF2742 1 79 +
ChrX	stalkie_big_nohaplotig	CDS	38889984	38890175	98	+	1	ID=ORF2742.mrna1.cds2;Name=ORF2742;Parent=ORF2742.mrna1;Target=ORF2742 80 271 +
ChrX	stalkie_big_nohaplotig	CDS	38890238	38890408	100	+	1	ID=ORF2742.mrna1.cds3;Name=ORF2742;Parent=ORF2742.mrna1;Target=ORF2742 272 442 +
ChrX	stalkie_big_nohaplotig	CDS	38890494	38890568	100	+	1	ID=ORF2742.mrna1.cds4;Name=ORF2742;Parent=ORF2742.mrna1;Target=ORF2742 443 517 +
ChrX	stalkie_big_nohaplotig	CDS	38890706	38890786	98	+	1	ID=ORF2742.mrna1.cds5;Name=ORF2742;Parent=ORF2742.mrna1;Target=ORF2742 518 598 +
ChrX	stalkie_big_nohaplotig	CDS	38890967	38891112	97	+	1	ID=ORF2742.mrna1.cds6;Name=ORF2742;Parent=ORF2742.mrna1;Target=ORF2742 599 744 +
ChrX	stalkie_big_nohaplotig	CDS	38891176	38891244	100	+	0	ID=ORF2742.mrna1.cds7;Name=ORF2742;Parent=ORF2742.mrna1;Target=ORF2742 745 813 +
Chr1	stalkie_big_nohaplotig	mRNA	17151511	17156105	.	+	.	ID=FBgn0052343.1.mrna1;Name=FBgn0052343.1;Parent=FBgn0052343.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1853;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	17151511	17151642	100	+	.	ID=FBgn0052343.1.mrna1.exon1;Name=FBgn0052343.1;Parent=FBgn0052343.1.mrna1;Target=FBgn0052343.1 1 132 +
Chr1	stalkie_big_nohaplotig	exon	17151709	17151864	100	+	.	ID=FBgn0052343.1.mrna1.exon2;Name=FBgn0052343.1;Parent=FBgn0052343.1.mrna1;Target=FBgn0052343.1 133 288 +
Chr1	stalkie_big_nohaplotig	exon	17152032	17152229	99	+	.	ID=FBgn0052343.1.mrna1.exon3;Name=FBgn0052343.1;Parent=FBgn0052343.1.mrna1;Target=FBgn0052343.1 289 486 +
Chr1	stalkie_big_nohaplotig	exon	17152291	17152503	100	+	.	ID=FBgn0052343.1.mrna1.exon4;Name=FBgn0052343.1;Parent=FBgn0052343.1.mrna1;Target=FBgn0052343.1 487 699 +
Chr1	stalkie_big_nohaplotig	exon	17152713	17152736	100	+	.	ID=FBgn0052343.1.mrna1.exon5;Name=FBgn0052343.1;Parent=FBgn0052343.1.mrna1;Target=FBgn0052343.1 700 723 +
Chr1	stalkie_big_nohaplotig	exon	17154090	17154246	99	+	.	ID=FBgn0052343.1.mrna1.exon6;Name=FBgn0052343.1;Parent=FBgn0052343.1.mrna1;Target=FBgn0052343.1 724 880 +
Chr1	stalkie_big_nohaplotig	exon	17154319	17154638	99	+	.	ID=FBgn0052343.1.mrna1.exon7;Name=FBgn0052343.1;Parent=FBgn0052343.1.mrna1;Target=FBgn0052343.1 881 1200 +
Chr1	stalkie_big_nohaplotig	exon	17154706	17154800	100	+	.	ID=FBgn0052343.1.mrna1.exon8;Name=FBgn0052343.1;Parent=FBgn0052343.1.mrna1;Target=FBgn0052343.1 1201 1295 +
Chr1	stalkie_big_nohaplotig	exon	17155318	17155408	100	+	.	ID=FBgn0052343.1.mrna1.exon9;Name=FBgn0052343.1;Parent=FBgn0052343.1.mrna1;Target=FBgn0052343.1 1296 1386 +
Chr1	stalkie_big_nohaplotig	exon	17155635	17156105	100	+	.	ID=FBgn0052343.1.mrna1.exon10;Name=FBgn0052343.1;Parent=FBgn0052343.1.mrna1;Target=FBgn0052343.1 1387 1857 +
Chr1	stalkie_big_nohaplotig	CDS	17151511	17151642	100	+	0	ID=FBgn0052343.1.mrna1.cds1;Name=FBgn0052343.1;Parent=FBgn0052343.1.mrna1;Target=FBgn0052343.1 1 132 +
Chr1	stalkie_big_nohaplotig	CDS	17151709	17151864	100	+	0	ID=FBgn0052343.1.mrna1.cds2;Name=FBgn0052343.1;Parent=FBgn0052343.1.mrna1;Target=FBgn0052343.1 133 288 +
Chr1	stalkie_big_nohaplotig	CDS	17152032	17152229	99	+	0	ID=FBgn0052343.1.mrna1.cds3;Name=FBgn0052343.1;Parent=FBgn0052343.1.mrna1;Target=FBgn0052343.1 289 486 +
Chr1	stalkie_big_nohaplotig	CDS	17152291	17152503	100	+	0	ID=FBgn0052343.1.mrna1.cds4;Name=FBgn0052343.1;Parent=FBgn0052343.1.mrna1;Target=FBgn0052343.1 487 699 +
Chr1	stalkie_big_nohaplotig	CDS	17152713	17152736	100	+	0	ID=FBgn0052343.1.mrna1.cds5;Name=FBgn0052343.1;Parent=FBgn0052343.1.mrna1;Target=FBgn0052343.1 700 723 +
Chr1	stalkie_big_nohaplotig	CDS	17154090	17154246	99	+	0	ID=FBgn0052343.1.mrna1.cds6;Name=FBgn0052343.1;Parent=FBgn0052343.1.mrna1;Target=FBgn0052343.1 724 880 +
Chr1	stalkie_big_nohaplotig	CDS	17154319	17154638	99	+	1	ID=FBgn0052343.1.mrna1.cds7;Name=FBgn0052343.1;Parent=FBgn0052343.1.mrna1;Target=FBgn0052343.1 881 1200 +
Chr1	stalkie_big_nohaplotig	CDS	17154706	17154800	100	+	0	ID=FBgn0052343.1.mrna1.cds8;Name=FBgn0052343.1;Parent=FBgn0052343.1.mrna1;Target=FBgn0052343.1 1201 1295 +
Chr1	stalkie_big_nohaplotig	CDS	17155318	17155408	100	+	2	ID=FBgn0052343.1.mrna1.cds9;Name=FBgn0052343.1;Parent=FBgn0052343.1.mrna1;Target=FBgn0052343.1 1296 1386 +
Chr1	stalkie_big_nohaplotig	CDS	17155635	17156105	100	+	0	ID=FBgn0052343.1.mrna1.cds10;Name=FBgn0052343.1;Parent=FBgn0052343.1.mrna1;Target=FBgn0052343.1 1387 1857 +
Chr2	stalkie_big_nohaplotig	mRNA	86778608	86781020	.	+	.	ID=FBgn0051436.3.mrna1;Name=FBgn0051436.3;Parent=FBgn0051436.3.path1;Dir=sensecoverage=100.0;identity=98.0;matches=1011;mismatches=21;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	86778608	86778765	98	+	.	ID=FBgn0051436.3.mrna1.exon1;Name=FBgn0051436.3;Parent=FBgn0051436.3.mrna1;Target=FBgn0051436.3 1 158 +
Chr2	stalkie_big_nohaplotig	exon	86778834	86778999	100	+	.	ID=FBgn0051436.3.mrna1.exon2;Name=FBgn0051436.3;Parent=FBgn0051436.3.mrna1;Target=FBgn0051436.3 159 324 +
Chr2	stalkie_big_nohaplotig	exon	86780253	86780781	96	+	.	ID=FBgn0051436.3.mrna1.exon3;Name=FBgn0051436.3;Parent=FBgn0051436.3.mrna1;Target=FBgn0051436.3 325 853 +
Chr2	stalkie_big_nohaplotig	exon	86780842	86781020	99	+	.	ID=FBgn0051436.3.mrna1.exon4;Name=FBgn0051436.3;Parent=FBgn0051436.3.mrna1;Target=FBgn0051436.3 854 1032 +
Chr2	stalkie_big_nohaplotig	CDS	86778608	86778765	98	+	0	ID=FBgn0051436.3.mrna1.cds1;Name=FBgn0051436.3;Parent=FBgn0051436.3.mrna1;Target=FBgn0051436.3 1 158 +
Chr2	stalkie_big_nohaplotig	CDS	86778834	86778999	100	+	2	ID=FBgn0051436.3.mrna1.cds2;Name=FBgn0051436.3;Parent=FBgn0051436.3.mrna1;Target=FBgn0051436.3 159 324 +
Chr2	stalkie_big_nohaplotig	CDS	86780253	86780781	96	+	0	ID=FBgn0051436.3.mrna1.cds3;Name=FBgn0051436.3;Parent=FBgn0051436.3.mrna1;Target=FBgn0051436.3 325 853 +
Chr2	stalkie_big_nohaplotig	CDS	86780842	86781020	99	+	1	ID=FBgn0051436.3.mrna1.cds4;Name=FBgn0051436.3;Parent=FBgn0051436.3.mrna1;Target=FBgn0051436.3 854 1032 +
Chr1	stalkie_big_nohaplotig	mRNA	52836723	52838375	.	-	.	ID=ORF683.mrna1;Name=ORF683;Parent=ORF683.path1;Dir=sensecoverage=100.0;identity=98.6;matches=1511;mismatches=22;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	52838256	52838375	96	-	.	ID=ORF683.mrna1.exon1;Name=ORF683;Parent=ORF683.mrna1;Target=ORF683 1 120 +
Chr1	stalkie_big_nohaplotig	exon	52838020	52838200	98	-	.	ID=ORF683.mrna1.exon2;Name=ORF683;Parent=ORF683.mrna1;Target=ORF683 121 301 +
Chr1	stalkie_big_nohaplotig	exon	52836723	52837954	98	-	.	ID=ORF683.mrna1.exon3;Name=ORF683;Parent=ORF683.mrna1;Target=ORF683 302 1533 +
Chr1	stalkie_big_nohaplotig	CDS	52838256	52838375	96	-	0	ID=ORF683.mrna1.cds1;Name=ORF683;Parent=ORF683.mrna1;Target=ORF683 1 120 +
Chr1	stalkie_big_nohaplotig	CDS	52838020	52838200	98	-	0	ID=ORF683.mrna1.cds2;Name=ORF683;Parent=ORF683.mrna1;Target=ORF683 121 301 +
Chr1	stalkie_big_nohaplotig	CDS	52836723	52837954	98	-	1	ID=ORF683.mrna1.cds3;Name=ORF683;Parent=ORF683.mrna1;Target=ORF683 302 1533 +
Chr2	stalkie_big_nohaplotig	mRNA	7942319	7947119	.	-	.	ID=FBgn0034313.1.mrna1;Name=FBgn0034313.1;Parent=FBgn0034313.1.path1;Dir=sensecoverage=100.0;identity=99.2;matches=2193;mismatches=6;indels=12;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	7946836	7947119	99	-	.	ID=FBgn0034313.1.mrna1.exon1;Name=FBgn0034313.1;Parent=FBgn0034313.1.mrna1;Target=FBgn0034313.1 1 284 +
Chr2	stalkie_big_nohaplotig	exon	7943928	7944926	98	-	.	ID=FBgn0034313.1.mrna1.exon2;Name=FBgn0034313.1;Parent=FBgn0034313.1.mrna1;Target=FBgn0034313.1 285 1283 +
Chr2	stalkie_big_nohaplotig	exon	7942319	7943240	99	-	.	ID=FBgn0034313.1.mrna1.exon3;Name=FBgn0034313.1;Parent=FBgn0034313.1.mrna1;Target=FBgn0034313.1 1284 2205 +
Chr2	stalkie_big_nohaplotig	CDS	7946836	7947119	99	-	0	ID=FBgn0034313.1.mrna1.cds1;Name=FBgn0034313.1;Parent=FBgn0034313.1.mrna1;Target=FBgn0034313.1 1 284 +
Chr2	stalkie_big_nohaplotig	CDS	7943928	7944926	98	-	2	ID=FBgn0034313.1.mrna1.cds2;Name=FBgn0034313.1;Parent=FBgn0034313.1.mrna1;Target=FBgn0034313.1 285 1283 +
Chr2	stalkie_big_nohaplotig	CDS	7942319	7943240	99	-	2	ID=FBgn0034313.1.mrna1.cds3;Name=FBgn0034313.1;Parent=FBgn0034313.1.mrna1;Target=FBgn0034313.1 1284 2205 +
Chr2	stalkie_big_nohaplotig	mRNA	145125436	145130966	.	+	.	ID=ORF209.mrna1;Name=ORF209;Parent=ORF209.path1;Dir=sensecoverage=100.0;identity=97.0;matches=2388;mismatches=53;indels=20;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	145125436	145125470	100	+	.	ID=ORF209.mrna1.exon1;Name=ORF209;Parent=ORF209.mrna1;Target=ORF209 1 35 +
Chr2	stalkie_big_nohaplotig	exon	145125704	145125840	100	+	.	ID=ORF209.mrna1.exon2;Name=ORF209;Parent=ORF209.mrna1;Target=ORF209 36 172 +
Chr2	stalkie_big_nohaplotig	exon	145127096	145127539	96	+	.	ID=ORF209.mrna1.exon3;Name=ORF209;Parent=ORF209.mrna1;Target=ORF209 173 616 +
Chr2	stalkie_big_nohaplotig	exon	145127602	145127718	98	+	.	ID=ORF209.mrna1.exon4;Name=ORF209;Parent=ORF209.mrna1;Target=ORF209 617 733 +
Chr2	stalkie_big_nohaplotig	exon	145127774	145127848	97	+	.	ID=ORF209.mrna1.exon5;Name=ORF209;Parent=ORF209.mrna1;Target=ORF209 734 808 +
Chr2	stalkie_big_nohaplotig	exon	145127927	145128001	94	+	.	ID=ORF209.mrna1.exon6;Name=ORF209;Parent=ORF209.mrna1;Target=ORF209 809 883 +
Chr2	stalkie_big_nohaplotig	exon	145128061	145128096	100	+	.	ID=ORF209.mrna1.exon7;Name=ORF209;Parent=ORF209.mrna1;Target=ORF209 884 919 +
Chr2	stalkie_big_nohaplotig	exon	145128178	145128951	95	+	.	ID=ORF209.mrna1.exon8;Name=ORF209;Parent=ORF209.mrna1;Target=ORF209 920 1699 +
Chr2	stalkie_big_nohaplotig	exon	145130069	145130179	98	+	.	ID=ORF209.mrna1.exon9;Name=ORF209;Parent=ORF209.mrna1;Target=ORF209 1700 1810 +
Chr2	stalkie_big_nohaplotig	exon	145130323	145130966	98	+	.	ID=ORF209.mrna1.exon10;Name=ORF209;Parent=ORF209.mrna1;Target=ORF209 1811 2454 +
Chr2	stalkie_big_nohaplotig	CDS	145125436	145125470	100	+	0	ID=ORF209.mrna1.cds1;Name=ORF209;Parent=ORF209.mrna1;Target=ORF209 1 35 +
Chr2	stalkie_big_nohaplotig	CDS	145125704	145125840	100	+	2	ID=ORF209.mrna1.cds2;Name=ORF209;Parent=ORF209.mrna1;Target=ORF209 36 172 +
Chr2	stalkie_big_nohaplotig	CDS	145127096	145127539	96	+	1	ID=ORF209.mrna1.cds3;Name=ORF209;Parent=ORF209.mrna1;Target=ORF209 173 616 +
Chr2	stalkie_big_nohaplotig	CDS	145127602	145127718	98	+	1	ID=ORF209.mrna1.cds4;Name=ORF209;Parent=ORF209.mrna1;Target=ORF209 617 733 +
Chr2	stalkie_big_nohaplotig	CDS	145127774	145127848	97	+	1	ID=ORF209.mrna1.cds5;Name=ORF209;Parent=ORF209.mrna1;Target=ORF209 734 808 +
Chr2	stalkie_big_nohaplotig	CDS	145127927	145128001	94	+	1	ID=ORF209.mrna1.cds6;Name=ORF209;Parent=ORF209.mrna1;Target=ORF209 809 883 +
Chr2	stalkie_big_nohaplotig	CDS	145128061	145128096	100	+	1	ID=ORF209.mrna1.cds7;Name=ORF209;Parent=ORF209.mrna1;Target=ORF209 884 919 +
Chr2	stalkie_big_nohaplotig	CDS	145128178	145128951	95	+	1	ID=ORF209.mrna1.cds8;Name=ORF209;Parent=ORF209.mrna1;Target=ORF209 920 1699 +
Chr2	stalkie_big_nohaplotig	CDS	145130069	145130179	98	+	1	ID=ORF209.mrna1.cds9;Name=ORF209;Parent=ORF209.mrna1;Target=ORF209 1700 1810 +
Chr2	stalkie_big_nohaplotig	CDS	145130323	145130966	98	+	1	ID=ORF209.mrna1.cds10;Name=ORF209;Parent=ORF209.mrna1;Target=ORF209 1811 2454 +
Chr1	stalkie_big_nohaplotig	mRNA	112872234	112873274	.	-	.	ID=ORF1624.mrna1;Name=ORF1624;Parent=ORF1624.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1040;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	112872234	112873274	99	-	.	ID=ORF1624.mrna1.exon1;Name=ORF1624;Parent=ORF1624.mrna1;Target=ORF1624 1041 1 .
Chr1	stalkie_big_nohaplotig	CDS	112872234	112873274	99	-	0	ID=ORF1624.mrna1.cds1;Name=ORF1624;Parent=ORF1624.mrna1;Target=ORF1624 1041 1 .
ChrX	stalkie_big_nohaplotig	mRNA	3424165	3424459	.	+	.	ID=FBgn0033049.1.mrna2;Name=FBgn0033049.1;Parent=FBgn0033049.1.path2;Dir=indeterminatecoverage=12.0;identity=100.0;matches=295;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	3424165	3424459	100	+	.	ID=FBgn0033049.1.mrna2.exon1;Name=FBgn0033049.1;Parent=FBgn0033049.1.mrna2;Target=FBgn0033049.1 2457 2163 .
Chr1	stalkie_big_nohaplotig	mRNA	61839860	61840498	.	+	.	ID=FBgn0010220.1.mrna2;Name=FBgn0010220.1;Parent=FBgn0010220.1.path2;Dir=sensecoverage=30.6;identity=100.0;matches=462;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	61839860	61839878	100	+	.	ID=FBgn0010220.1.mrna2.exon1;Name=FBgn0010220.1;Parent=FBgn0010220.1.mrna2;Target=FBgn0010220.1 1051 1069 +
Chr1	stalkie_big_nohaplotig	exon	61839941	61840056	100	+	.	ID=FBgn0010220.1.mrna2.exon2;Name=FBgn0010220.1;Parent=FBgn0010220.1.mrna2;Target=FBgn0010220.1 1070 1185 +
Chr1	stalkie_big_nohaplotig	exon	61840111	61840212	100	+	.	ID=FBgn0010220.1.mrna2.exon3;Name=FBgn0010220.1;Parent=FBgn0010220.1.mrna2;Target=FBgn0010220.1 1186 1287 +
Chr1	stalkie_big_nohaplotig	exon	61840274	61840498	100	+	.	ID=FBgn0010220.1.mrna2.exon4;Name=FBgn0010220.1;Parent=FBgn0010220.1.mrna2;Target=FBgn0010220.1 1288 1512 +
Chr1	stalkie_big_nohaplotig	CDS	61839860	61839878	100	+	0	ID=FBgn0010220.1.mrna2.cds1;Name=FBgn0010220.1;Parent=FBgn0010220.1.mrna2;Target=FBgn0010220.1 1051 1069 +
Chr1	stalkie_big_nohaplotig	CDS	61839941	61840056	100	+	1	ID=FBgn0010220.1.mrna2.cds2;Name=FBgn0010220.1;Parent=FBgn0010220.1.mrna2;Target=FBgn0010220.1 1070 1185 +
Chr1	stalkie_big_nohaplotig	CDS	61840111	61840212	100	+	0	ID=FBgn0010220.1.mrna2.cds3;Name=FBgn0010220.1;Parent=FBgn0010220.1.mrna2;Target=FBgn0010220.1 1186 1287 +
Chr1	stalkie_big_nohaplotig	CDS	61840274	61840498	100	+	0	ID=FBgn0010220.1.mrna2.cds4;Name=FBgn0010220.1;Parent=FBgn0010220.1.mrna2;Target=FBgn0010220.1 1288 1512 +
Chr1	stalkie_big_nohaplotig	mRNA	111473633	111474986	.	+	.	ID=FBgn0029887.1.mrna1;Name=FBgn0029887.1;Parent=FBgn0029887.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1073;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	111473633	111473743	100	+	.	ID=FBgn0029887.1.mrna1.exon1;Name=FBgn0029887.1;Parent=FBgn0029887.1.mrna1;Target=FBgn0029887.1 1 111 +
Chr1	stalkie_big_nohaplotig	exon	111473913	111474727	99	+	.	ID=FBgn0029887.1.mrna1.exon2;Name=FBgn0029887.1;Parent=FBgn0029887.1.mrna1;Target=FBgn0029887.1 112 926 +
Chr1	stalkie_big_nohaplotig	exon	111474782	111474843	100	+	.	ID=FBgn0029887.1.mrna1.exon3;Name=FBgn0029887.1;Parent=FBgn0029887.1.mrna1;Target=FBgn0029887.1 927 988 +
Chr1	stalkie_big_nohaplotig	exon	111474898	111474986	100	+	.	ID=FBgn0029887.1.mrna1.exon4;Name=FBgn0029887.1;Parent=FBgn0029887.1.mrna1;Target=FBgn0029887.1 989 1077 +
Chr1	stalkie_big_nohaplotig	CDS	111473633	111473743	100	+	0	ID=FBgn0029887.1.mrna1.cds1;Name=FBgn0029887.1;Parent=FBgn0029887.1.mrna1;Target=FBgn0029887.1 1 111 +
Chr1	stalkie_big_nohaplotig	CDS	111473913	111474727	99	+	0	ID=FBgn0029887.1.mrna1.cds2;Name=FBgn0029887.1;Parent=FBgn0029887.1.mrna1;Target=FBgn0029887.1 112 926 +
Chr1	stalkie_big_nohaplotig	CDS	111474782	111474843	100	+	2	ID=FBgn0029887.1.mrna1.cds3;Name=FBgn0029887.1;Parent=FBgn0029887.1.mrna1;Target=FBgn0029887.1 927 988 +
Chr1	stalkie_big_nohaplotig	CDS	111474898	111474986	100	+	1	ID=FBgn0029887.1.mrna1.cds4;Name=FBgn0029887.1;Parent=FBgn0029887.1.mrna1;Target=FBgn0029887.1 989 1077 +
Chr2	stalkie_big_nohaplotig	mRNA	34439850	34478783	.	+	.	ID=FBgn0035092.1.mrna1;Name=FBgn0035092.1;Parent=FBgn0035092.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=1218;mismatches=6;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	34439850	34440059	100	+	.	ID=FBgn0035092.1.mrna1.exon1;Name=FBgn0035092.1;Parent=FBgn0035092.1.mrna1;Target=FBgn0035092.1 1 210 +
Chr2	stalkie_big_nohaplotig	exon	34477276	34477389	100	+	.	ID=FBgn0035092.1.mrna1.exon2;Name=FBgn0035092.1;Parent=FBgn0035092.1.mrna1;Target=FBgn0035092.1 211 324 +
Chr2	stalkie_big_nohaplotig	exon	34477726	34478392	99	+	.	ID=FBgn0035092.1.mrna1.exon3;Name=FBgn0035092.1;Parent=FBgn0035092.1.mrna1;Target=FBgn0035092.1 325 991 +
Chr2	stalkie_big_nohaplotig	exon	34478551	34478783	99	+	.	ID=FBgn0035092.1.mrna1.exon4;Name=FBgn0035092.1;Parent=FBgn0035092.1.mrna1;Target=FBgn0035092.1 992 1224 +
Chr2	stalkie_big_nohaplotig	CDS	34439850	34440059	100	+	0	ID=FBgn0035092.1.mrna1.cds1;Name=FBgn0035092.1;Parent=FBgn0035092.1.mrna1;Target=FBgn0035092.1 1 210 +
Chr2	stalkie_big_nohaplotig	CDS	34477276	34477389	100	+	0	ID=FBgn0035092.1.mrna1.cds2;Name=FBgn0035092.1;Parent=FBgn0035092.1.mrna1;Target=FBgn0035092.1 211 324 +
Chr2	stalkie_big_nohaplotig	CDS	34477726	34478392	99	+	0	ID=FBgn0035092.1.mrna1.cds3;Name=FBgn0035092.1;Parent=FBgn0035092.1.mrna1;Target=FBgn0035092.1 325 991 +
Chr2	stalkie_big_nohaplotig	CDS	34478551	34478783	99	+	1	ID=FBgn0035092.1.mrna1.cds4;Name=FBgn0035092.1;Parent=FBgn0035092.1.mrna1;Target=FBgn0035092.1 992 1224 +
Chr1	stalkie_big_nohaplotig	mRNA	162150562	162156671	.	+	.	ID=AAEL006530.1.mrna1;Name=AAEL006530.1;Parent=AAEL006530.1.path1;Dir=sensecoverage=96.2;identity=98.4;matches=1586;mismatches=19;indels=6;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	162150562	162150667	94	+	.	ID=AAEL006530.1.mrna1.exon1;Name=AAEL006530.1;Parent=AAEL006530.1.mrna1;Target=AAEL006530.1 1 106 +
Chr1	stalkie_big_nohaplotig	exon	162155097	162156359	98	+	.	ID=AAEL006530.1.mrna1.exon2;Name=AAEL006530.1;Parent=AAEL006530.1.mrna1;Target=AAEL006530.1 107 1363 +
Chr1	stalkie_big_nohaplotig	exon	162156430	162156671	97	+	.	ID=AAEL006530.1.mrna1.exon3;Name=AAEL006530.1;Parent=AAEL006530.1.mrna1;Target=AAEL006530.1 1364 1605 +
Chr1	stalkie_big_nohaplotig	CDS	162150562	162150667	94	+	0	ID=AAEL006530.1.mrna1.cds1;Name=AAEL006530.1;Parent=AAEL006530.1.mrna1;Target=AAEL006530.1 1 106 +
Chr1	stalkie_big_nohaplotig	CDS	162155097	162156359	98	+	1	ID=AAEL006530.1.mrna1.cds2;Name=AAEL006530.1;Parent=AAEL006530.1.mrna1;Target=AAEL006530.1 107 1363 +
Chr1	stalkie_big_nohaplotig	CDS	162156430	162156671	97	+	1	ID=AAEL006530.1.mrna1.cds3;Name=AAEL006530.1;Parent=AAEL006530.1.mrna1;Target=AAEL006530.1 1364 1605 +
Chr2	stalkie_big_nohaplotig	mRNA	87978506	87984893	.	+	.	ID=FBgn0051146.1.mrna1;Name=FBgn0051146.1;Parent=FBgn0051146.1.path1;Dir=sensecoverage=67.8;identity=99.2;matches=3043;mismatches=14;indels=12;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	87978506	87978654	100	+	.	ID=FBgn0051146.1.mrna1.exon1;Name=FBgn0051146.1;Parent=FBgn0051146.1.mrna1;Target=FBgn0051146.1 1450 1598 +
Chr2	stalkie_big_nohaplotig	exon	87981789	87981904	100	+	.	ID=FBgn0051146.1.mrna1.exon2;Name=FBgn0051146.1;Parent=FBgn0051146.1.mrna1;Target=FBgn0051146.1 1599 1714 +
Chr2	stalkie_big_nohaplotig	exon	87982090	87984893	99	+	.	ID=FBgn0051146.1.mrna1.exon3;Name=FBgn0051146.1;Parent=FBgn0051146.1.mrna1;Target=FBgn0051146.1 1715 4506 +
Chr2	stalkie_big_nohaplotig	CDS	87978506	87978654	100	+	0	ID=FBgn0051146.1.mrna1.cds1;Name=FBgn0051146.1;Parent=FBgn0051146.1.mrna1;Target=FBgn0051146.1 1450 1598 +
Chr2	stalkie_big_nohaplotig	CDS	87981789	87981904	100	+	2	ID=FBgn0051146.1.mrna1.cds2;Name=FBgn0051146.1;Parent=FBgn0051146.1.mrna1;Target=FBgn0051146.1 1599 1714 +
Chr2	stalkie_big_nohaplotig	CDS	87982090	87984893	99	+	1	ID=FBgn0051146.1.mrna1.cds3;Name=FBgn0051146.1;Parent=FBgn0051146.1.mrna1;Target=FBgn0051146.1 1715 4506 +
Chr1	stalkie_big_nohaplotig	mRNA	27418393	27429874	.	+	.	ID=FBgn0035244.1.mrna1;Name=FBgn0035244.1;Parent=FBgn0035244.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2086;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	27418393	27418527	100	+	.	ID=FBgn0035244.1.mrna1.exon1;Name=FBgn0035244.1;Parent=FBgn0035244.1.mrna1;Target=FBgn0035244.1 1 135 +
Chr1	stalkie_big_nohaplotig	exon	27422967	27423096	100	+	.	ID=FBgn0035244.1.mrna1.exon2;Name=FBgn0035244.1;Parent=FBgn0035244.1.mrna1;Target=FBgn0035244.1 136 265 +
Chr1	stalkie_big_nohaplotig	exon	27425192	27425315	99	+	.	ID=FBgn0035244.1.mrna1.exon3;Name=FBgn0035244.1;Parent=FBgn0035244.1.mrna1;Target=FBgn0035244.1 266 389 +
Chr1	stalkie_big_nohaplotig	exon	27425404	27425558	100	+	.	ID=FBgn0035244.1.mrna1.exon4;Name=FBgn0035244.1;Parent=FBgn0035244.1.mrna1;Target=FBgn0035244.1 390 544 +
Chr1	stalkie_big_nohaplotig	exon	27425631	27425797	100	+	.	ID=FBgn0035244.1.mrna1.exon5;Name=FBgn0035244.1;Parent=FBgn0035244.1.mrna1;Target=FBgn0035244.1 545 711 +
Chr1	stalkie_big_nohaplotig	exon	27427112	27427222	100	+	.	ID=FBgn0035244.1.mrna1.exon6;Name=FBgn0035244.1;Parent=FBgn0035244.1.mrna1;Target=FBgn0035244.1 712 822 +
Chr1	stalkie_big_nohaplotig	exon	27427281	27428075	99	+	.	ID=FBgn0035244.1.mrna1.exon7;Name=FBgn0035244.1;Parent=FBgn0035244.1.mrna1;Target=FBgn0035244.1 823 1617 +
Chr1	stalkie_big_nohaplotig	exon	27428152	27428427	100	+	.	ID=FBgn0035244.1.mrna1.exon8;Name=FBgn0035244.1;Parent=FBgn0035244.1.mrna1;Target=FBgn0035244.1 1618 1893 +
Chr1	stalkie_big_nohaplotig	exon	27429677	27429874	100	+	.	ID=FBgn0035244.1.mrna1.exon9;Name=FBgn0035244.1;Parent=FBgn0035244.1.mrna1;Target=FBgn0035244.1 1894 2091 +
Chr1	stalkie_big_nohaplotig	CDS	27418393	27418527	100	+	0	ID=FBgn0035244.1.mrna1.cds1;Name=FBgn0035244.1;Parent=FBgn0035244.1.mrna1;Target=FBgn0035244.1 1 135 +
Chr1	stalkie_big_nohaplotig	CDS	27422967	27423096	100	+	0	ID=FBgn0035244.1.mrna1.cds2;Name=FBgn0035244.1;Parent=FBgn0035244.1.mrna1;Target=FBgn0035244.1 136 265 +
Chr1	stalkie_big_nohaplotig	CDS	27425192	27425315	99	+	1	ID=FBgn0035244.1.mrna1.cds3;Name=FBgn0035244.1;Parent=FBgn0035244.1.mrna1;Target=FBgn0035244.1 266 389 +
Chr1	stalkie_big_nohaplotig	CDS	27425404	27425558	100	+	2	ID=FBgn0035244.1.mrna1.cds4;Name=FBgn0035244.1;Parent=FBgn0035244.1.mrna1;Target=FBgn0035244.1 390 544 +
Chr1	stalkie_big_nohaplotig	CDS	27425631	27425797	100	+	1	ID=FBgn0035244.1.mrna1.cds5;Name=FBgn0035244.1;Parent=FBgn0035244.1.mrna1;Target=FBgn0035244.1 545 711 +
Chr1	stalkie_big_nohaplotig	CDS	27427112	27427222	100	+	0	ID=FBgn0035244.1.mrna1.cds6;Name=FBgn0035244.1;Parent=FBgn0035244.1.mrna1;Target=FBgn0035244.1 712 822 +
Chr1	stalkie_big_nohaplotig	CDS	27427281	27428075	99	+	0	ID=FBgn0035244.1.mrna1.cds7;Name=FBgn0035244.1;Parent=FBgn0035244.1.mrna1;Target=FBgn0035244.1 823 1617 +
Chr1	stalkie_big_nohaplotig	CDS	27428152	27428427	100	+	0	ID=FBgn0035244.1.mrna1.cds8;Name=FBgn0035244.1;Parent=FBgn0035244.1.mrna1;Target=FBgn0035244.1 1618 1893 +
Chr1	stalkie_big_nohaplotig	CDS	27429677	27429874	100	+	0	ID=FBgn0035244.1.mrna1.cds9;Name=FBgn0035244.1;Parent=FBgn0035244.1.mrna1;Target=FBgn0035244.1 1894 2091 +
Chr2	stalkie_big_nohaplotig	mRNA	9027177	9038231	.	-	.	ID=FBgn0034644.1.mrna1;Name=FBgn0034644.1;Parent=FBgn0034644.1.path1;Dir=sensecoverage=99.9;identity=99.7;matches=2200;mismatches=6;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	9038004	9038231	100	-	.	ID=FBgn0034644.1.mrna1.exon1;Name=FBgn0034644.1;Parent=FBgn0034644.1.mrna1;Target=FBgn0034644.1 1 228 +
Chr2	stalkie_big_nohaplotig	exon	9035328	9035454	100	-	.	ID=FBgn0034644.1.mrna1.exon2;Name=FBgn0034644.1;Parent=FBgn0034644.1.mrna1;Target=FBgn0034644.1 229 355 +
Chr2	stalkie_big_nohaplotig	exon	9030832	9030955	100	-	.	ID=FBgn0034644.1.mrna1.exon3;Name=FBgn0034644.1;Parent=FBgn0034644.1.mrna1;Target=FBgn0034644.1 356 479 +
Chr2	stalkie_big_nohaplotig	exon	9029573	9029649	100	-	.	ID=FBgn0034644.1.mrna1.exon4;Name=FBgn0034644.1;Parent=FBgn0034644.1.mrna1;Target=FBgn0034644.1 480 556 +
Chr2	stalkie_big_nohaplotig	exon	9028569	9028950	99	-	.	ID=FBgn0034644.1.mrna1.exon5;Name=FBgn0034644.1;Parent=FBgn0034644.1.mrna1;Target=FBgn0034644.1 557 938 +
Chr2	stalkie_big_nohaplotig	exon	9027685	9028502	99	-	.	ID=FBgn0034644.1.mrna1.exon6;Name=FBgn0034644.1;Parent=FBgn0034644.1.mrna1;Target=FBgn0034644.1 939 1756 +
Chr2	stalkie_big_nohaplotig	exon	9027177	9027626	100	-	.	ID=FBgn0034644.1.mrna1.exon7;Name=FBgn0034644.1;Parent=FBgn0034644.1.mrna1;Target=FBgn0034644.1 1757 2206 +
Chr2	stalkie_big_nohaplotig	CDS	9038004	9038231	100	-	0	ID=FBgn0034644.1.mrna1.cds1;Name=FBgn0034644.1;Parent=FBgn0034644.1.mrna1;Target=FBgn0034644.1 1 228 +
Chr2	stalkie_big_nohaplotig	CDS	9035328	9035454	100	-	0	ID=FBgn0034644.1.mrna1.cds2;Name=FBgn0034644.1;Parent=FBgn0034644.1.mrna1;Target=FBgn0034644.1 229 355 +
Chr2	stalkie_big_nohaplotig	CDS	9030832	9030955	100	-	1	ID=FBgn0034644.1.mrna1.cds3;Name=FBgn0034644.1;Parent=FBgn0034644.1.mrna1;Target=FBgn0034644.1 356 479 +
Chr2	stalkie_big_nohaplotig	CDS	9029573	9029649	100	-	2	ID=FBgn0034644.1.mrna1.cds4;Name=FBgn0034644.1;Parent=FBgn0034644.1.mrna1;Target=FBgn0034644.1 480 556 +
Chr2	stalkie_big_nohaplotig	CDS	9028569	9028950	99	-	1	ID=FBgn0034644.1.mrna1.cds5;Name=FBgn0034644.1;Parent=FBgn0034644.1.mrna1;Target=FBgn0034644.1 557 938 +
Chr2	stalkie_big_nohaplotig	CDS	9027685	9028502	99	-	2	ID=FBgn0034644.1.mrna1.cds6;Name=FBgn0034644.1;Parent=FBgn0034644.1.mrna1;Target=FBgn0034644.1 939 1756 +
Chr2	stalkie_big_nohaplotig	CDS	9027178	9027626	100	-	1	ID=FBgn0034644.1.mrna1.cds7;Name=FBgn0034644.1;Parent=FBgn0034644.1.mrna1;Target=FBgn0034644.1 1757 2205 +
Chr1	stalkie_big_nohaplotig	mRNA	173274801	173276920	.	-	.	ID=ORF2649.mrna1;Name=ORF2649;Parent=ORF2649.path1;Dir=sensecoverage=99.3;identity=99.3;matches=816;mismatches=6;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	173276888	173276920	93	-	.	ID=ORF2649.mrna1.exon1;Name=ORF2649;Parent=ORF2649.mrna1;Target=ORF2649 7 39 +
Chr1	stalkie_big_nohaplotig	exon	173276075	173276128	96	-	.	ID=ORF2649.mrna1.exon2;Name=ORF2649;Parent=ORF2649.mrna1;Target=ORF2649 40 93 +
Chr1	stalkie_big_nohaplotig	exon	173275950	173275985	100	-	.	ID=ORF2649.mrna1.exon3;Name=ORF2649;Parent=ORF2649.mrna1;Target=ORF2649 94 129 +
Chr1	stalkie_big_nohaplotig	exon	173275834	173275878	100	-	.	ID=ORF2649.mrna1.exon4;Name=ORF2649;Parent=ORF2649.mrna1;Target=ORF2649 130 174 +
Chr1	stalkie_big_nohaplotig	exon	173275676	173275774	100	-	.	ID=ORF2649.mrna1.exon5;Name=ORF2649;Parent=ORF2649.mrna1;Target=ORF2649 175 273 +
Chr1	stalkie_big_nohaplotig	exon	173275597	173275605	100	-	.	ID=ORF2649.mrna1.exon6;Name=ORF2649;Parent=ORF2649.mrna1;Target=ORF2649 274 282 +
Chr1	stalkie_big_nohaplotig	exon	173275495	173275537	100	-	.	ID=ORF2649.mrna1.exon7;Name=ORF2649;Parent=ORF2649.mrna1;Target=ORF2649 283 325 +
Chr1	stalkie_big_nohaplotig	exon	173275147	173275420	99	-	.	ID=ORF2649.mrna1.exon8;Name=ORF2649;Parent=ORF2649.mrna1;Target=ORF2649 326 599 +
Chr1	stalkie_big_nohaplotig	exon	173274969	173275089	100	-	.	ID=ORF2649.mrna1.exon9;Name=ORF2649;Parent=ORF2649.mrna1;Target=ORF2649 600 720 +
Chr1	stalkie_big_nohaplotig	exon	173274801	173274908	100	-	.	ID=ORF2649.mrna1.exon10;Name=ORF2649;Parent=ORF2649.mrna1;Target=ORF2649 721 828 +
Chr1	stalkie_big_nohaplotig	CDS	173276888	173276914	100	-	0	ID=ORF2649.mrna1.cds1;Name=ORF2649;Parent=ORF2649.mrna1;Target=ORF2649 13 39 +
Chr1	stalkie_big_nohaplotig	CDS	173276075	173276128	96	-	0	ID=ORF2649.mrna1.cds2;Name=ORF2649;Parent=ORF2649.mrna1;Target=ORF2649 40 93 +
Chr1	stalkie_big_nohaplotig	CDS	173275950	173275985	100	-	0	ID=ORF2649.mrna1.cds3;Name=ORF2649;Parent=ORF2649.mrna1;Target=ORF2649 94 129 +
Chr1	stalkie_big_nohaplotig	CDS	173275834	173275878	100	-	0	ID=ORF2649.mrna1.cds4;Name=ORF2649;Parent=ORF2649.mrna1;Target=ORF2649 130 174 +
Chr1	stalkie_big_nohaplotig	CDS	173275676	173275774	100	-	0	ID=ORF2649.mrna1.cds5;Name=ORF2649;Parent=ORF2649.mrna1;Target=ORF2649 175 273 +
Chr1	stalkie_big_nohaplotig	CDS	173275597	173275605	100	-	0	ID=ORF2649.mrna1.cds6;Name=ORF2649;Parent=ORF2649.mrna1;Target=ORF2649 274 282 +
Chr1	stalkie_big_nohaplotig	CDS	173275495	173275537	100	-	0	ID=ORF2649.mrna1.cds7;Name=ORF2649;Parent=ORF2649.mrna1;Target=ORF2649 283 325 +
Chr1	stalkie_big_nohaplotig	CDS	173275147	173275420	99	-	1	ID=ORF2649.mrna1.cds8;Name=ORF2649;Parent=ORF2649.mrna1;Target=ORF2649 326 599 +
Chr1	stalkie_big_nohaplotig	CDS	173274969	173275089	100	-	2	ID=ORF2649.mrna1.cds9;Name=ORF2649;Parent=ORF2649.mrna1;Target=ORF2649 600 720 +
Chr1	stalkie_big_nohaplotig	CDS	173274801	173274908	100	-	0	ID=ORF2649.mrna1.cds10;Name=ORF2649;Parent=ORF2649.mrna1;Target=ORF2649 721 828 +
Chr2	stalkie_big_nohaplotig	mRNA	7706064	7718013	.	+	.	ID=FBgn0261588.mrna1;Name=FBgn0261588;Parent=FBgn0261588.path1;Dir=sensecoverage=100.0;identity=99.4;matches=2213;mismatches=13;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	7706064	7707334	99	+	.	ID=FBgn0261588.mrna1.exon1;Name=FBgn0261588;Parent=FBgn0261588.mrna1;Target=FBgn0261588 1 1271 +
Chr2	stalkie_big_nohaplotig	exon	7707534	7707898	99	+	.	ID=FBgn0261588.mrna1.exon2;Name=FBgn0261588;Parent=FBgn0261588.mrna1;Target=FBgn0261588 1272 1636 +
Chr2	stalkie_big_nohaplotig	exon	7713999	7714179	98	+	.	ID=FBgn0261588.mrna1.exon3;Name=FBgn0261588;Parent=FBgn0261588.mrna1;Target=FBgn0261588 1637 1817 +
Chr2	stalkie_big_nohaplotig	exon	7715967	7716020	100	+	.	ID=FBgn0261588.mrna1.exon4;Name=FBgn0261588;Parent=FBgn0261588.mrna1;Target=FBgn0261588 1818 1871 +
Chr2	stalkie_big_nohaplotig	exon	7716725	7716808	100	+	.	ID=FBgn0261588.mrna1.exon5;Name=FBgn0261588;Parent=FBgn0261588.mrna1;Target=FBgn0261588 1872 1955 +
Chr2	stalkie_big_nohaplotig	exon	7716897	7717045	100	+	.	ID=FBgn0261588.mrna1.exon6;Name=FBgn0261588;Parent=FBgn0261588.mrna1;Target=FBgn0261588 1956 2104 +
Chr2	stalkie_big_nohaplotig	exon	7717892	7718013	99	+	.	ID=FBgn0261588.mrna1.exon7;Name=FBgn0261588;Parent=FBgn0261588.mrna1;Target=FBgn0261588 2105 2226 +
Chr2	stalkie_big_nohaplotig	CDS	7706064	7707334	99	+	0	ID=FBgn0261588.mrna1.cds1;Name=FBgn0261588;Parent=FBgn0261588.mrna1;Target=FBgn0261588 1 1271 +
Chr2	stalkie_big_nohaplotig	CDS	7707534	7707898	99	+	2	ID=FBgn0261588.mrna1.cds2;Name=FBgn0261588;Parent=FBgn0261588.mrna1;Target=FBgn0261588 1272 1636 +
Chr2	stalkie_big_nohaplotig	CDS	7713999	7714179	98	+	1	ID=FBgn0261588.mrna1.cds3;Name=FBgn0261588;Parent=FBgn0261588.mrna1;Target=FBgn0261588 1637 1817 +
Chr2	stalkie_big_nohaplotig	CDS	7715967	7716020	100	+	2	ID=FBgn0261588.mrna1.cds4;Name=FBgn0261588;Parent=FBgn0261588.mrna1;Target=FBgn0261588 1818 1871 +
Chr2	stalkie_big_nohaplotig	CDS	7716725	7716808	100	+	2	ID=FBgn0261588.mrna1.cds5;Name=FBgn0261588;Parent=FBgn0261588.mrna1;Target=FBgn0261588 1872 1955 +
Chr2	stalkie_big_nohaplotig	CDS	7716897	7717045	100	+	2	ID=FBgn0261588.mrna1.cds6;Name=FBgn0261588;Parent=FBgn0261588.mrna1;Target=FBgn0261588 1956 2104 +
Chr2	stalkie_big_nohaplotig	CDS	7717892	7718013	99	+	1	ID=FBgn0261588.mrna1.cds7;Name=FBgn0261588;Parent=FBgn0261588.mrna1;Target=FBgn0261588 2105 2226 +
ChrX	stalkie_big_nohaplotig	mRNA	18183795	18184812	.	-	.	ID=ORF2650.mrna1;Name=ORF2650;Parent=ORF2650.path1;Dir=sensecoverage=100.0;identity=99.8;matches=826;mismatches=2;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	18184587	18184812	100	-	.	ID=ORF2650.mrna1.exon1;Name=ORF2650;Parent=ORF2650.mrna1;Target=ORF2650 1 226 +
ChrX	stalkie_big_nohaplotig	exon	18183795	18184396	99	-	.	ID=ORF2650.mrna1.exon2;Name=ORF2650;Parent=ORF2650.mrna1;Target=ORF2650 227 828 +
ChrX	stalkie_big_nohaplotig	CDS	18184587	18184812	100	-	0	ID=ORF2650.mrna1.cds1;Name=ORF2650;Parent=ORF2650.mrna1;Target=ORF2650 1 226 +
ChrX	stalkie_big_nohaplotig	CDS	18183795	18184396	99	-	1	ID=ORF2650.mrna1.cds2;Name=ORF2650;Parent=ORF2650.mrna1;Target=ORF2650 227 828 +
Chr1	stalkie_big_nohaplotig	mRNA	113243780	113244787	.	-	.	ID=ORF2013.mrna1;Name=ORF2013;Parent=ORF2013.path1;Dir=sensecoverage=100.0;identity=99.9;matches=938;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	113244598	113244787	100	-	.	ID=ORF2013.mrna1.exon1;Name=ORF2013;Parent=ORF2013.mrna1;Target=ORF2013 1 190 +
Chr1	stalkie_big_nohaplotig	exon	113243780	113244528	99	-	.	ID=ORF2013.mrna1.exon2;Name=ORF2013;Parent=ORF2013.mrna1;Target=ORF2013 191 939 +
Chr1	stalkie_big_nohaplotig	CDS	113244598	113244787	100	-	0	ID=ORF2013.mrna1.cds1;Name=ORF2013;Parent=ORF2013.mrna1;Target=ORF2013 1 190 +
Chr1	stalkie_big_nohaplotig	CDS	113243780	113244528	99	-	1	ID=ORF2013.mrna1.cds2;Name=ORF2013;Parent=ORF2013.mrna1;Target=ORF2013 191 939 +
Chr2	stalkie_big_nohaplotig	mRNA	81485621	81488738	.	-	.	ID=FBgn0037592.1.mrna1;Name=FBgn0037592.1;Parent=FBgn0037592.1.path1;Dir=sensecoverage=100.0;identity=98.1;matches=1374;mismatches=10;indels=16;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	81488574	81488738	98	-	.	ID=FBgn0037592.1.mrna1.exon1;Name=FBgn0037592.1;Parent=FBgn0037592.1.mrna1;Target=FBgn0037592.1 1 165 +
Chr2	stalkie_big_nohaplotig	exon	81487716	81488507	99	-	.	ID=FBgn0037592.1.mrna1.exon2;Name=FBgn0037592.1;Parent=FBgn0037592.1.mrna1;Target=FBgn0037592.1 166 957 +
Chr2	stalkie_big_nohaplotig	exon	81486185	81486325	98	-	.	ID=FBgn0037592.1.mrna1.exon3;Name=FBgn0037592.1;Parent=FBgn0037592.1.mrna1;Target=FBgn0037592.1 958 1098 +
Chr2	stalkie_big_nohaplotig	exon	81485950	81486116	89	-	.	ID=FBgn0037592.1.mrna1.exon4;Name=FBgn0037592.1;Parent=FBgn0037592.1.mrna1;Target=FBgn0037592.1 1099 1265 +
Chr2	stalkie_big_nohaplotig	exon	81485621	81485747	100	-	.	ID=FBgn0037592.1.mrna1.exon5;Name=FBgn0037592.1;Parent=FBgn0037592.1.mrna1;Target=FBgn0037592.1 1266 1392 +
Chr2	stalkie_big_nohaplotig	CDS	81488574	81488738	98	-	0	ID=FBgn0037592.1.mrna1.cds1;Name=FBgn0037592.1;Parent=FBgn0037592.1.mrna1;Target=FBgn0037592.1 1 165 +
Chr2	stalkie_big_nohaplotig	CDS	81487716	81488507	99	-	0	ID=FBgn0037592.1.mrna1.cds2;Name=FBgn0037592.1;Parent=FBgn0037592.1.mrna1;Target=FBgn0037592.1 166 957 +
Chr2	stalkie_big_nohaplotig	CDS	81486185	81486325	98	-	0	ID=FBgn0037592.1.mrna1.cds3;Name=FBgn0037592.1;Parent=FBgn0037592.1.mrna1;Target=FBgn0037592.1 958 1098 +
Chr2	stalkie_big_nohaplotig	CDS	81485950	81486116	89	-	0	ID=FBgn0037592.1.mrna1.cds4;Name=FBgn0037592.1;Parent=FBgn0037592.1.mrna1;Target=FBgn0037592.1 1099 1265 +
Chr2	stalkie_big_nohaplotig	CDS	81485621	81485747	100	-	2	ID=FBgn0037592.1.mrna1.cds5;Name=FBgn0037592.1;Parent=FBgn0037592.1.mrna1;Target=FBgn0037592.1 1266 1392 +
ChrX	stalkie_big_nohaplotig	mRNA	61778426	61781023	.	-	.	ID=FBgn0263873.mrna1;Name=FBgn0263873;Parent=FBgn0263873.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2394;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	61779483	61781023	100	-	.	ID=FBgn0263873.mrna1.exon1;Name=FBgn0263873;Parent=FBgn0263873.mrna1;Target=FBgn0263873 1 1541 +
ChrX	stalkie_big_nohaplotig	exon	61779170	61779425	100	-	.	ID=FBgn0263873.mrna1.exon2;Name=FBgn0263873;Parent=FBgn0263873.mrna1;Target=FBgn0263873 1542 1797 +
ChrX	stalkie_big_nohaplotig	exon	61778621	61779100	100	-	.	ID=FBgn0263873.mrna1.exon3;Name=FBgn0263873;Parent=FBgn0263873.mrna1;Target=FBgn0263873 1798 2277 +
ChrX	stalkie_big_nohaplotig	exon	61778426	61778542	100	-	.	ID=FBgn0263873.mrna1.exon4;Name=FBgn0263873;Parent=FBgn0263873.mrna1;Target=FBgn0263873 2278 2394 +
ChrX	stalkie_big_nohaplotig	CDS	61779483	61781023	100	-	0	ID=FBgn0263873.mrna1.cds1;Name=FBgn0263873;Parent=FBgn0263873.mrna1;Target=FBgn0263873 1 1541 +
ChrX	stalkie_big_nohaplotig	CDS	61779170	61779425	100	-	2	ID=FBgn0263873.mrna1.cds2;Name=FBgn0263873;Parent=FBgn0263873.mrna1;Target=FBgn0263873 1542 1797 +
ChrX	stalkie_big_nohaplotig	CDS	61778621	61779100	100	-	0	ID=FBgn0263873.mrna1.cds3;Name=FBgn0263873;Parent=FBgn0263873.mrna1;Target=FBgn0263873 1798 2277 +
ChrX	stalkie_big_nohaplotig	CDS	61778426	61778542	100	-	0	ID=FBgn0263873.mrna1.cds4;Name=FBgn0263873;Parent=FBgn0263873.mrna1;Target=FBgn0263873 2278 2394 +
Chr1	stalkie_big_nohaplotig	mRNA	140258972	140275935	.	+	.	ID=FBgn0264255.1.mrna2;Name=FBgn0264255.1;Parent=FBgn0264255.1.path2;Dir=sensecoverage=26.7;identity=99.8;matches=1696;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	140258972	140259156	100	+	.	ID=FBgn0264255.1.mrna2.exon1;Name=FBgn0264255.1;Parent=FBgn0264255.1.mrna2;Target=FBgn0264255.1 4664 4848 +
Chr1	stalkie_big_nohaplotig	exon	140262270	140262540	100	+	.	ID=FBgn0264255.1.mrna2.exon2;Name=FBgn0264255.1;Parent=FBgn0264255.1.mrna2;Target=FBgn0264255.1 4849 5119 +
Chr1	stalkie_big_nohaplotig	exon	140271495	140271799	100	+	.	ID=FBgn0264255.1.mrna2.exon3;Name=FBgn0264255.1;Parent=FBgn0264255.1.mrna2;Target=FBgn0264255.1 5120 5424 +
Chr1	stalkie_big_nohaplotig	exon	140274997	140275935	99	+	.	ID=FBgn0264255.1.mrna2.exon4;Name=FBgn0264255.1;Parent=FBgn0264255.1.mrna2;Target=FBgn0264255.1 5425 6363 +
Chr1	stalkie_big_nohaplotig	mRNA	25346194	25401743	.	+	.	ID=FBgn0260660.1.mrna1;Name=FBgn0260660.1;Parent=FBgn0260660.1.path1;Dir=sensecoverage=40.9;identity=99.8;matches=1417;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	25346194	25346248	100	+	.	ID=FBgn0260660.1.mrna1.exon1;Name=FBgn0260660.1;Parent=FBgn0260660.1.mrna1;Target=FBgn0260660.1 840 894 +
Chr1	stalkie_big_nohaplotig	exon	25356630	25356696	100	+	.	ID=FBgn0260660.1.mrna1.exon2;Name=FBgn0260660.1;Parent=FBgn0260660.1.mrna1;Target=FBgn0260660.1 895 961 +
Chr1	stalkie_big_nohaplotig	exon	25360033	25360190	100	+	.	ID=FBgn0260660.1.mrna1.exon3;Name=FBgn0260660.1;Parent=FBgn0260660.1.mrna1;Target=FBgn0260660.1 962 1119 +
Chr1	stalkie_big_nohaplotig	exon	25368174	25368311	100	+	.	ID=FBgn0260660.1.mrna1.exon4;Name=FBgn0260660.1;Parent=FBgn0260660.1.mrna1;Target=FBgn0260660.1 1120 1257 +
Chr1	stalkie_big_nohaplotig	exon	25377069	25377260	99	+	.	ID=FBgn0260660.1.mrna1.exon5;Name=FBgn0260660.1;Parent=FBgn0260660.1.mrna1;Target=FBgn0260660.1 1258 1449 +
Chr1	stalkie_big_nohaplotig	exon	25386917	25387081	100	+	.	ID=FBgn0260660.1.mrna1.exon6;Name=FBgn0260660.1;Parent=FBgn0260660.1.mrna1;Target=FBgn0260660.1 1450 1614 +
Chr1	stalkie_big_nohaplotig	exon	25398819	25399385	99	+	.	ID=FBgn0260660.1.mrna1.exon7;Name=FBgn0260660.1;Parent=FBgn0260660.1.mrna1;Target=FBgn0260660.1 1615 2181 +
Chr1	stalkie_big_nohaplotig	exon	25401666	25401743	98	+	.	ID=FBgn0260660.1.mrna1.exon8;Name=FBgn0260660.1;Parent=FBgn0260660.1.mrna1;Target=FBgn0260660.1 2182 2259 +
Chr1	stalkie_big_nohaplotig	CDS	25346195	25346248	100	+	0	ID=FBgn0260660.1.mrna1.cds1;Name=FBgn0260660.1;Parent=FBgn0260660.1.mrna1;Target=FBgn0260660.1 841 894 +
Chr1	stalkie_big_nohaplotig	CDS	25356630	25356696	100	+	0	ID=FBgn0260660.1.mrna1.cds2;Name=FBgn0260660.1;Parent=FBgn0260660.1.mrna1;Target=FBgn0260660.1 895 961 +
Chr1	stalkie_big_nohaplotig	CDS	25360033	25360190	100	+	1	ID=FBgn0260660.1.mrna1.cds3;Name=FBgn0260660.1;Parent=FBgn0260660.1.mrna1;Target=FBgn0260660.1 962 1119 +
Chr1	stalkie_big_nohaplotig	CDS	25368174	25368311	100	+	0	ID=FBgn0260660.1.mrna1.cds4;Name=FBgn0260660.1;Parent=FBgn0260660.1.mrna1;Target=FBgn0260660.1 1120 1257 +
Chr1	stalkie_big_nohaplotig	CDS	25377069	25377260	99	+	0	ID=FBgn0260660.1.mrna1.cds5;Name=FBgn0260660.1;Parent=FBgn0260660.1.mrna1;Target=FBgn0260660.1 1258 1449 +
Chr1	stalkie_big_nohaplotig	CDS	25386917	25387081	100	+	0	ID=FBgn0260660.1.mrna1.cds6;Name=FBgn0260660.1;Parent=FBgn0260660.1.mrna1;Target=FBgn0260660.1 1450 1614 +
Chr1	stalkie_big_nohaplotig	CDS	25398819	25399385	99	+	0	ID=FBgn0260660.1.mrna1.cds7;Name=FBgn0260660.1;Parent=FBgn0260660.1.mrna1;Target=FBgn0260660.1 1615 2181 +
Chr1	stalkie_big_nohaplotig	CDS	25401666	25401743	98	+	0	ID=FBgn0260660.1.mrna1.cds8;Name=FBgn0260660.1;Parent=FBgn0260660.1.mrna1;Target=FBgn0260660.1 2182 2259 +
Chr1	stalkie_big_nohaplotig	mRNA	142049362	142056804	.	+	.	ID=FBgn0026428.1.mrna1;Name=FBgn0026428.1;Parent=FBgn0026428.1.path1;Dir=sensecoverage=99.4;identity=99.6;matches=3203;mismatches=13;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	142049362	142049544	100	+	.	ID=FBgn0026428.1.mrna1.exon1;Name=FBgn0026428.1;Parent=FBgn0026428.1.mrna1;Target=FBgn0026428.1 19 201 +
Chr1	stalkie_big_nohaplotig	exon	142049630	142049760	100	+	.	ID=FBgn0026428.1.mrna1.exon2;Name=FBgn0026428.1;Parent=FBgn0026428.1.mrna1;Target=FBgn0026428.1 202 332 +
Chr1	stalkie_big_nohaplotig	exon	142051965	142052148	99	+	.	ID=FBgn0026428.1.mrna1.exon3;Name=FBgn0026428.1;Parent=FBgn0026428.1.mrna1;Target=FBgn0026428.1 333 516 +
Chr1	stalkie_big_nohaplotig	exon	142052210	142052346	100	+	.	ID=FBgn0026428.1.mrna1.exon4;Name=FBgn0026428.1;Parent=FBgn0026428.1.mrna1;Target=FBgn0026428.1 517 653 +
Chr1	stalkie_big_nohaplotig	exon	142052416	142052550	100	+	.	ID=FBgn0026428.1.mrna1.exon5;Name=FBgn0026428.1;Parent=FBgn0026428.1.mrna1;Target=FBgn0026428.1 654 788 +
Chr1	stalkie_big_nohaplotig	exon	142052613	142053313	99	+	.	ID=FBgn0026428.1.mrna1.exon6;Name=FBgn0026428.1;Parent=FBgn0026428.1.mrna1;Target=FBgn0026428.1 789 1489 +
Chr1	stalkie_big_nohaplotig	exon	142053472	142053976	99	+	.	ID=FBgn0026428.1.mrna1.exon7;Name=FBgn0026428.1;Parent=FBgn0026428.1.mrna1;Target=FBgn0026428.1 1490 1994 +
Chr1	stalkie_big_nohaplotig	exon	142054033	142054228	99	+	.	ID=FBgn0026428.1.mrna1.exon8;Name=FBgn0026428.1;Parent=FBgn0026428.1.mrna1;Target=FBgn0026428.1 1995 2190 +
Chr1	stalkie_big_nohaplotig	exon	142054296	142054913	99	+	.	ID=FBgn0026428.1.mrna1.exon9;Name=FBgn0026428.1;Parent=FBgn0026428.1.mrna1;Target=FBgn0026428.1 2191 2808 +
Chr1	stalkie_big_nohaplotig	exon	142055013	142055100	100	+	.	ID=FBgn0026428.1.mrna1.exon10;Name=FBgn0026428.1;Parent=FBgn0026428.1.mrna1;Target=FBgn0026428.1 2809 2896 +
Chr1	stalkie_big_nohaplotig	exon	142056467	142056804	99	+	.	ID=FBgn0026428.1.mrna1.exon11;Name=FBgn0026428.1;Parent=FBgn0026428.1.mrna1;Target=FBgn0026428.1 2897 3234 +
Chr1	stalkie_big_nohaplotig	CDS	142049362	142049544	100	+	0	ID=FBgn0026428.1.mrna1.cds1;Name=FBgn0026428.1;Parent=FBgn0026428.1.mrna1;Target=FBgn0026428.1 19 201 +
Chr1	stalkie_big_nohaplotig	CDS	142049630	142049760	100	+	0	ID=FBgn0026428.1.mrna1.cds2;Name=FBgn0026428.1;Parent=FBgn0026428.1.mrna1;Target=FBgn0026428.1 202 332 +
Chr1	stalkie_big_nohaplotig	CDS	142051965	142052148	99	+	2	ID=FBgn0026428.1.mrna1.cds3;Name=FBgn0026428.1;Parent=FBgn0026428.1.mrna1;Target=FBgn0026428.1 333 516 +
Chr1	stalkie_big_nohaplotig	CDS	142052210	142052346	100	+	0	ID=FBgn0026428.1.mrna1.cds4;Name=FBgn0026428.1;Parent=FBgn0026428.1.mrna1;Target=FBgn0026428.1 517 653 +
Chr1	stalkie_big_nohaplotig	CDS	142052416	142052550	100	+	2	ID=FBgn0026428.1.mrna1.cds5;Name=FBgn0026428.1;Parent=FBgn0026428.1.mrna1;Target=FBgn0026428.1 654 788 +
Chr1	stalkie_big_nohaplotig	CDS	142052613	142053313	99	+	2	ID=FBgn0026428.1.mrna1.cds6;Name=FBgn0026428.1;Parent=FBgn0026428.1.mrna1;Target=FBgn0026428.1 789 1489 +
Chr1	stalkie_big_nohaplotig	CDS	142053472	142053976	99	+	1	ID=FBgn0026428.1.mrna1.cds7;Name=FBgn0026428.1;Parent=FBgn0026428.1.mrna1;Target=FBgn0026428.1 1490 1994 +
Chr1	stalkie_big_nohaplotig	CDS	142054033	142054228	99	+	2	ID=FBgn0026428.1.mrna1.cds8;Name=FBgn0026428.1;Parent=FBgn0026428.1.mrna1;Target=FBgn0026428.1 1995 2190 +
Chr1	stalkie_big_nohaplotig	CDS	142054296	142054913	99	+	0	ID=FBgn0026428.1.mrna1.cds9;Name=FBgn0026428.1;Parent=FBgn0026428.1.mrna1;Target=FBgn0026428.1 2191 2808 +
Chr1	stalkie_big_nohaplotig	CDS	142055013	142055100	100	+	0	ID=FBgn0026428.1.mrna1.cds10;Name=FBgn0026428.1;Parent=FBgn0026428.1.mrna1;Target=FBgn0026428.1 2809 2896 +
Chr1	stalkie_big_nohaplotig	CDS	142056467	142056804	99	+	1	ID=FBgn0026428.1.mrna1.cds11;Name=FBgn0026428.1;Parent=FBgn0026428.1.mrna1;Target=FBgn0026428.1 2897 3234 +
Chr1	stalkie_big_nohaplotig	mRNA	150778491	150779715	.	+	.	ID=FBgn0038076.2.mrna1;Name=FBgn0038076.2;Parent=FBgn0038076.2.path1;Dir=sensecoverage=100.0;identity=97.9;matches=866;mismatches=19;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	150778491	150778665	97	+	.	ID=FBgn0038076.2.mrna1.exon1;Name=FBgn0038076.2;Parent=FBgn0038076.2.mrna1;Target=FBgn0038076.2 1 175 +
Chr1	stalkie_big_nohaplotig	exon	150778748	150778951	97	+	.	ID=FBgn0038076.2.mrna1.exon2;Name=FBgn0038076.2;Parent=FBgn0038076.2.mrna1;Target=FBgn0038076.2 176 379 +
Chr1	stalkie_big_nohaplotig	exon	150779021	150779206	97	+	.	ID=FBgn0038076.2.mrna1.exon3;Name=FBgn0038076.2;Parent=FBgn0038076.2.mrna1;Target=FBgn0038076.2 380 565 +
Chr1	stalkie_big_nohaplotig	exon	150779268	150779337	100	+	.	ID=FBgn0038076.2.mrna1.exon4;Name=FBgn0038076.2;Parent=FBgn0038076.2.mrna1;Target=FBgn0038076.2 566 635 +
Chr1	stalkie_big_nohaplotig	exon	150779409	150779526	100	+	.	ID=FBgn0038076.2.mrna1.exon5;Name=FBgn0038076.2;Parent=FBgn0038076.2.mrna1;Target=FBgn0038076.2 636 753 +
Chr1	stalkie_big_nohaplotig	exon	150779584	150779715	96	+	.	ID=FBgn0038076.2.mrna1.exon6;Name=FBgn0038076.2;Parent=FBgn0038076.2.mrna1;Target=FBgn0038076.2 754 885 +
Chr1	stalkie_big_nohaplotig	CDS	150778491	150778665	97	+	0	ID=FBgn0038076.2.mrna1.cds1;Name=FBgn0038076.2;Parent=FBgn0038076.2.mrna1;Target=FBgn0038076.2 1 175 +
Chr1	stalkie_big_nohaplotig	CDS	150778748	150778951	97	+	1	ID=FBgn0038076.2.mrna1.cds2;Name=FBgn0038076.2;Parent=FBgn0038076.2.mrna1;Target=FBgn0038076.2 176 379 +
Chr1	stalkie_big_nohaplotig	CDS	150779021	150779206	97	+	1	ID=FBgn0038076.2.mrna1.cds3;Name=FBgn0038076.2;Parent=FBgn0038076.2.mrna1;Target=FBgn0038076.2 380 565 +
Chr1	stalkie_big_nohaplotig	CDS	150779268	150779337	100	+	1	ID=FBgn0038076.2.mrna1.cds4;Name=FBgn0038076.2;Parent=FBgn0038076.2.mrna1;Target=FBgn0038076.2 566 635 +
Chr1	stalkie_big_nohaplotig	CDS	150779409	150779526	100	+	2	ID=FBgn0038076.2.mrna1.cds5;Name=FBgn0038076.2;Parent=FBgn0038076.2.mrna1;Target=FBgn0038076.2 636 753 +
Chr1	stalkie_big_nohaplotig	CDS	150779584	150779715	96	+	0	ID=FBgn0038076.2.mrna1.cds6;Name=FBgn0038076.2;Parent=FBgn0038076.2.mrna1;Target=FBgn0038076.2 754 885 +
Chr2	stalkie_big_nohaplotig	mRNA	150679814	150742449	.	+	.	ID=FBgn0004369.1.mrna1;Name=FBgn0004369.1;Parent=FBgn0004369.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=4010;mismatches=16;indels=12;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	150679814	150680456	99	+	.	ID=FBgn0004369.1.mrna1.exon1;Name=FBgn0004369.1;Parent=FBgn0004369.1.mrna1;Target=FBgn0004369.1 1 643 +
Chr2	stalkie_big_nohaplotig	exon	150708897	150709100	100	+	.	ID=FBgn0004369.1.mrna1.exon2;Name=FBgn0004369.1;Parent=FBgn0004369.1.mrna1;Target=FBgn0004369.1 644 847 +
Chr2	stalkie_big_nohaplotig	exon	150713061	150713338	100	+	.	ID=FBgn0004369.1.mrna1.exon3;Name=FBgn0004369.1;Parent=FBgn0004369.1.mrna1;Target=FBgn0004369.1 848 1125 +
Chr2	stalkie_big_nohaplotig	exon	150717083	150717199	100	+	.	ID=FBgn0004369.1.mrna1.exon4;Name=FBgn0004369.1;Parent=FBgn0004369.1.mrna1;Target=FBgn0004369.1 1126 1242 +
Chr2	stalkie_big_nohaplotig	exon	150721347	150721486	100	+	.	ID=FBgn0004369.1.mrna1.exon5;Name=FBgn0004369.1;Parent=FBgn0004369.1.mrna1;Target=FBgn0004369.1 1243 1382 +
Chr2	stalkie_big_nohaplotig	exon	150739351	150739640	100	+	.	ID=FBgn0004369.1.mrna1.exon6;Name=FBgn0004369.1;Parent=FBgn0004369.1.mrna1;Target=FBgn0004369.1 1383 1672 +
Chr2	stalkie_big_nohaplotig	exon	150739712	150740052	99	+	.	ID=FBgn0004369.1.mrna1.exon7;Name=FBgn0004369.1;Parent=FBgn0004369.1.mrna1;Target=FBgn0004369.1 1673 2013 +
Chr2	stalkie_big_nohaplotig	exon	150740113	150740279	100	+	.	ID=FBgn0004369.1.mrna1.exon8;Name=FBgn0004369.1;Parent=FBgn0004369.1.mrna1;Target=FBgn0004369.1 2014 2180 +
Chr2	stalkie_big_nohaplotig	exon	150740465	150741020	99	+	.	ID=FBgn0004369.1.mrna1.exon9;Name=FBgn0004369.1;Parent=FBgn0004369.1.mrna1;Target=FBgn0004369.1 2181 2736 +
Chr2	stalkie_big_nohaplotig	exon	150741089	150741357	100	+	.	ID=FBgn0004369.1.mrna1.exon10;Name=FBgn0004369.1;Parent=FBgn0004369.1.mrna1;Target=FBgn0004369.1 2737 3005 +
Chr2	stalkie_big_nohaplotig	exon	150741423	150742449	98	+	.	ID=FBgn0004369.1.mrna1.exon11;Name=FBgn0004369.1;Parent=FBgn0004369.1.mrna1;Target=FBgn0004369.1 3006 4032 +
Chr2	stalkie_big_nohaplotig	CDS	150679814	150680456	99	+	0	ID=FBgn0004369.1.mrna1.cds1;Name=FBgn0004369.1;Parent=FBgn0004369.1.mrna1;Target=FBgn0004369.1 1 643 +
Chr2	stalkie_big_nohaplotig	CDS	150708897	150709100	100	+	1	ID=FBgn0004369.1.mrna1.cds2;Name=FBgn0004369.1;Parent=FBgn0004369.1.mrna1;Target=FBgn0004369.1 644 847 +
Chr2	stalkie_big_nohaplotig	CDS	150713061	150713338	100	+	1	ID=FBgn0004369.1.mrna1.cds3;Name=FBgn0004369.1;Parent=FBgn0004369.1.mrna1;Target=FBgn0004369.1 848 1125 +
Chr2	stalkie_big_nohaplotig	CDS	150717083	150717199	100	+	0	ID=FBgn0004369.1.mrna1.cds4;Name=FBgn0004369.1;Parent=FBgn0004369.1.mrna1;Target=FBgn0004369.1 1126 1242 +
Chr2	stalkie_big_nohaplotig	CDS	150721347	150721486	100	+	0	ID=FBgn0004369.1.mrna1.cds5;Name=FBgn0004369.1;Parent=FBgn0004369.1.mrna1;Target=FBgn0004369.1 1243 1382 +
Chr2	stalkie_big_nohaplotig	CDS	150739351	150739640	100	+	2	ID=FBgn0004369.1.mrna1.cds6;Name=FBgn0004369.1;Parent=FBgn0004369.1.mrna1;Target=FBgn0004369.1 1383 1672 +
Chr2	stalkie_big_nohaplotig	CDS	150739712	150740052	99	+	1	ID=FBgn0004369.1.mrna1.cds7;Name=FBgn0004369.1;Parent=FBgn0004369.1.mrna1;Target=FBgn0004369.1 1673 2013 +
Chr2	stalkie_big_nohaplotig	CDS	150740113	150740279	100	+	0	ID=FBgn0004369.1.mrna1.cds8;Name=FBgn0004369.1;Parent=FBgn0004369.1.mrna1;Target=FBgn0004369.1 2014 2180 +
Chr2	stalkie_big_nohaplotig	CDS	150740465	150741020	99	+	2	ID=FBgn0004369.1.mrna1.cds9;Name=FBgn0004369.1;Parent=FBgn0004369.1.mrna1;Target=FBgn0004369.1 2181 2736 +
Chr2	stalkie_big_nohaplotig	CDS	150741089	150741357	100	+	0	ID=FBgn0004369.1.mrna1.cds10;Name=FBgn0004369.1;Parent=FBgn0004369.1.mrna1;Target=FBgn0004369.1 2737 3005 +
Chr2	stalkie_big_nohaplotig	CDS	150741423	150742449	98	+	2	ID=FBgn0004369.1.mrna1.cds11;Name=FBgn0004369.1;Parent=FBgn0004369.1.mrna1;Target=FBgn0004369.1 3006 4032 +
Chr2	stalkie_big_nohaplotig	mRNA	48624845	48702454	.	-	.	ID=FBgn0005631.1.mrna1;Name=FBgn0005631.1;Parent=FBgn0005631.1.path1;Dir=sensecoverage=95.5;identity=99.6;matches=3654;mismatches=13;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	48702333	48702454	100	-	.	ID=FBgn0005631.1.mrna1.exon1;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 200 321 +
Chr2	stalkie_big_nohaplotig	exon	48699513	48699693	100	-	.	ID=FBgn0005631.1.mrna1.exon2;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 322 502 +
Chr2	stalkie_big_nohaplotig	exon	48677412	48677530	100	-	.	ID=FBgn0005631.1.mrna1.exon3;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 503 621 +
Chr2	stalkie_big_nohaplotig	exon	48674013	48674196	100	-	.	ID=FBgn0005631.1.mrna1.exon4;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 622 805 +
Chr2	stalkie_big_nohaplotig	exon	48668493	48668505	92	-	.	ID=FBgn0005631.1.mrna1.exon6;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 1215 1227 +
Chr2	stalkie_big_nohaplotig	exon	48668415	48668422	100	-	.	ID=FBgn0005631.1.mrna1.exon7;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 1311 1318 +
Chr2	stalkie_big_nohaplotig	exon	48666802	48667003	100	-	.	ID=FBgn0005631.1.mrna1.exon8;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 1354 1555 +
Chr2	stalkie_big_nohaplotig	exon	48666614	48666696	97	-	.	ID=FBgn0005631.1.mrna1.exon9;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 1556 1638 +
Chr2	stalkie_big_nohaplotig	exon	48656065	48656225	100	-	.	ID=FBgn0005631.1.mrna1.exon10;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 1639 1799 +
Chr2	stalkie_big_nohaplotig	exon	48648889	48648970	100	-	.	ID=FBgn0005631.1.mrna1.exon11;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 1800 1881 +
Chr2	stalkie_big_nohaplotig	exon	48648435	48648605	100	-	.	ID=FBgn0005631.1.mrna1.exon12;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 1882 2052 +
Chr2	stalkie_big_nohaplotig	exon	48636214	48636306	100	-	.	ID=FBgn0005631.1.mrna1.exon13;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 2053 2145 +
Chr2	stalkie_big_nohaplotig	exon	48635874	48636072	99	-	.	ID=FBgn0005631.1.mrna1.exon14;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 2146 2344 +
Chr2	stalkie_big_nohaplotig	exon	48633170	48633291	100	-	.	ID=FBgn0005631.1.mrna1.exon15;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 2345 2466 +
Chr2	stalkie_big_nohaplotig	exon	48631532	48631684	100	-	.	ID=FBgn0005631.1.mrna1.exon16;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 2467 2619 +
Chr2	stalkie_big_nohaplotig	exon	48631122	48631419	99	-	.	ID=FBgn0005631.1.mrna1.exon17;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 2620 2917 +
Chr2	stalkie_big_nohaplotig	exon	48630425	48630645	100	-	.	ID=FBgn0005631.1.mrna1.exon18;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 2918 3138 +
Chr2	stalkie_big_nohaplotig	exon	48630041	48630266	100	-	.	ID=FBgn0005631.1.mrna1.exon19;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 3139 3364 +
Chr2	stalkie_big_nohaplotig	exon	48626176	48626320	98	-	.	ID=FBgn0005631.1.mrna1.exon20;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 3365 3509 +
Chr2	stalkie_big_nohaplotig	exon	48625762	48626079	100	-	.	ID=FBgn0005631.1.mrna1.exon21;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 3510 3827 +
Chr2	stalkie_big_nohaplotig	exon	48624845	48625409	99	-	.	ID=FBgn0005631.1.mrna1.exon22;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 3828 4392 +
Chr2	stalkie_big_nohaplotig	CDS	48666802	48666922	100	-	0	ID=FBgn0005631.1.mrna1.cds1;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 1435 1555 +
Chr2	stalkie_big_nohaplotig	CDS	48666614	48666696	97	-	1	ID=FBgn0005631.1.mrna1.cds2;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 1556 1638 +
Chr2	stalkie_big_nohaplotig	CDS	48656065	48656225	100	-	0	ID=FBgn0005631.1.mrna1.cds3;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 1639 1799 +
Chr2	stalkie_big_nohaplotig	CDS	48648889	48648970	100	-	2	ID=FBgn0005631.1.mrna1.cds4;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 1800 1881 +
Chr2	stalkie_big_nohaplotig	CDS	48648435	48648605	100	-	0	ID=FBgn0005631.1.mrna1.cds5;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 1882 2052 +
Chr2	stalkie_big_nohaplotig	CDS	48636214	48636306	100	-	0	ID=FBgn0005631.1.mrna1.cds6;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 2053 2145 +
Chr2	stalkie_big_nohaplotig	CDS	48635874	48636072	99	-	0	ID=FBgn0005631.1.mrna1.cds7;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 2146 2344 +
Chr2	stalkie_big_nohaplotig	CDS	48633170	48633291	100	-	1	ID=FBgn0005631.1.mrna1.cds8;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 2345 2466 +
Chr2	stalkie_big_nohaplotig	CDS	48631532	48631684	100	-	0	ID=FBgn0005631.1.mrna1.cds9;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 2467 2619 +
Chr2	stalkie_big_nohaplotig	CDS	48631122	48631419	99	-	0	ID=FBgn0005631.1.mrna1.cds10;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 2620 2917 +
Chr2	stalkie_big_nohaplotig	CDS	48630425	48630645	100	-	1	ID=FBgn0005631.1.mrna1.cds11;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 2918 3138 +
Chr2	stalkie_big_nohaplotig	CDS	48630041	48630266	100	-	0	ID=FBgn0005631.1.mrna1.cds12;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 3139 3364 +
Chr2	stalkie_big_nohaplotig	CDS	48626176	48626320	98	-	1	ID=FBgn0005631.1.mrna1.cds13;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 3365 3509 +
Chr2	stalkie_big_nohaplotig	CDS	48625762	48626079	100	-	2	ID=FBgn0005631.1.mrna1.cds14;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 3510 3827 +
Chr2	stalkie_big_nohaplotig	CDS	48624845	48625409	99	-	2	ID=FBgn0005631.1.mrna1.cds15;Name=FBgn0005631.1;Parent=FBgn0005631.1.mrna1;Target=FBgn0005631.1 3828 4392 +
Chr2	stalkie_big_nohaplotig	mRNA	131443184	131443653	.	+	.	ID=FBgn0051163.1.mrna1;Name=FBgn0051163.1;Parent=FBgn0051163.1.path1;Dir=indeterminatecoverage=14.9;identity=100.0;matches=470;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	131443184	131443653	100	+	.	ID=FBgn0051163.1.mrna1.exon1;Name=FBgn0051163.1;Parent=FBgn0051163.1.mrna1;Target=FBgn0051163.1 470 1 .
Chr2	stalkie_big_nohaplotig	CDS	131443184	131443653	100	+	0	ID=FBgn0051163.1.mrna1.cds1;Name=FBgn0051163.1;Parent=FBgn0051163.1.mrna1;Target=FBgn0051163.1 470 1 .
Chr2	stalkie_big_nohaplotig	mRNA	39309609	39311237	.	+	.	ID=FBgn0020257.1.mrna1;Name=FBgn0020257.1;Parent=FBgn0020257.1.path1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1625;mismatches=4;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	39309609	39311237	99	+	.	ID=FBgn0020257.1.mrna1.exon1;Name=FBgn0020257.1;Parent=FBgn0020257.1.mrna1;Target=FBgn0020257.1 1629 1 .
Chr2	stalkie_big_nohaplotig	CDS	39309609	39311237	99	+	0	ID=FBgn0020257.1.mrna1.cds1;Name=FBgn0020257.1;Parent=FBgn0020257.1.mrna1;Target=FBgn0020257.1 1629 1 .
Chr2	stalkie_big_nohaplotig	mRNA	140628077	140633959	.	-	.	ID=FBgn0002905.1.mrna1;Name=FBgn0002905.1;Parent=FBgn0002905.1.path1;Dir=sensecoverage=100.0;identity=98.8;matches=3858;mismatches=47;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	140633367	140633959	98	-	.	ID=FBgn0002905.1.mrna1.exon1;Name=FBgn0002905.1;Parent=FBgn0002905.1.mrna1;Target=FBgn0002905.1 1 594 +
Chr2	stalkie_big_nohaplotig	exon	140632448	140633315	99	-	.	ID=FBgn0002905.1.mrna1.exon2;Name=FBgn0002905.1;Parent=FBgn0002905.1.mrna1;Target=FBgn0002905.1 595 1462 +
Chr2	stalkie_big_nohaplotig	exon	140632229	140632375	99	-	.	ID=FBgn0002905.1.mrna1.exon3;Name=FBgn0002905.1;Parent=FBgn0002905.1.mrna1;Target=FBgn0002905.1 1463 1609 +
Chr2	stalkie_big_nohaplotig	exon	140632059	140632171	100	-	.	ID=FBgn0002905.1.mrna1.exon4;Name=FBgn0002905.1;Parent=FBgn0002905.1.mrna1;Target=FBgn0002905.1 1610 1722 +
Chr2	stalkie_big_nohaplotig	exon	140631885	140631998	99	-	.	ID=FBgn0002905.1.mrna1.exon5;Name=FBgn0002905.1;Parent=FBgn0002905.1.mrna1;Target=FBgn0002905.1 1723 1836 +
Chr2	stalkie_big_nohaplotig	exon	140630230	140630494	99	-	.	ID=FBgn0002905.1.mrna1.exon6;Name=FBgn0002905.1;Parent=FBgn0002905.1.mrna1;Target=FBgn0002905.1 1837 2101 +
Chr2	stalkie_big_nohaplotig	exon	140629661	140629949	98	-	.	ID=FBgn0002905.1.mrna1.exon7;Name=FBgn0002905.1;Parent=FBgn0002905.1.mrna1;Target=FBgn0002905.1 2102 2390 +
Chr2	stalkie_big_nohaplotig	exon	140628077	140629592	98	-	.	ID=FBgn0002905.1.mrna1.exon8;Name=FBgn0002905.1;Parent=FBgn0002905.1.mrna1;Target=FBgn0002905.1 2391 3906 +
Chr2	stalkie_big_nohaplotig	CDS	140633839	140633957	95	-	0	ID=FBgn0002905.1.mrna1.cds1;Name=FBgn0002905.1;Parent=FBgn0002905.1.mrna1;Target=FBgn0002905.1 3 122 +
Chr1	stalkie_big_nohaplotig	mRNA	143806606	143811261	.	-	.	ID=FBgn0030506.1.mrna1;Name=FBgn0030506.1;Parent=FBgn0030506.1.path1;Dir=sensecoverage=100.0;identity=99.0;matches=2740;mismatches=29;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	143811085	143811261	98	-	.	ID=FBgn0030506.1.mrna1.exon1;Name=FBgn0030506.1;Parent=FBgn0030506.1.mrna1;Target=FBgn0030506.1 1 177 +
Chr1	stalkie_big_nohaplotig	exon	143810888	143811020	100	-	.	ID=FBgn0030506.1.mrna1.exon2;Name=FBgn0030506.1;Parent=FBgn0030506.1.mrna1;Target=FBgn0030506.1 178 310 +
Chr1	stalkie_big_nohaplotig	exon	143810658	143810825	98	-	.	ID=FBgn0030506.1.mrna1.exon3;Name=FBgn0030506.1;Parent=FBgn0030506.1.mrna1;Target=FBgn0030506.1 311 478 +
Chr1	stalkie_big_nohaplotig	exon	143809577	143810487	99	-	.	ID=FBgn0030506.1.mrna1.exon4;Name=FBgn0030506.1;Parent=FBgn0030506.1.mrna1;Target=FBgn0030506.1 479 1389 +
Chr1	stalkie_big_nohaplotig	exon	143809078	143809524	100	-	.	ID=FBgn0030506.1.mrna1.exon5;Name=FBgn0030506.1;Parent=FBgn0030506.1.mrna1;Target=FBgn0030506.1 1390 1836 +
Chr1	stalkie_big_nohaplotig	exon	143808866	143809009	100	-	.	ID=FBgn0030506.1.mrna1.exon6;Name=FBgn0030506.1;Parent=FBgn0030506.1.mrna1;Target=FBgn0030506.1 1837 1980 +
Chr1	stalkie_big_nohaplotig	exon	143807056	143807466	97	-	.	ID=FBgn0030506.1.mrna1.exon7;Name=FBgn0030506.1;Parent=FBgn0030506.1.mrna1;Target=FBgn0030506.1 1981 2391 +
Chr1	stalkie_big_nohaplotig	exon	143806606	143806983	98	-	.	ID=FBgn0030506.1.mrna1.exon8;Name=FBgn0030506.1;Parent=FBgn0030506.1.mrna1;Target=FBgn0030506.1 2392 2769 +
Chr1	stalkie_big_nohaplotig	CDS	143811085	143811261	98	-	0	ID=FBgn0030506.1.mrna1.cds1;Name=FBgn0030506.1;Parent=FBgn0030506.1.mrna1;Target=FBgn0030506.1 1 177 +
Chr1	stalkie_big_nohaplotig	CDS	143810888	143811020	100	-	0	ID=FBgn0030506.1.mrna1.cds2;Name=FBgn0030506.1;Parent=FBgn0030506.1.mrna1;Target=FBgn0030506.1 178 310 +
Chr1	stalkie_big_nohaplotig	CDS	143810658	143810825	98	-	1	ID=FBgn0030506.1.mrna1.cds3;Name=FBgn0030506.1;Parent=FBgn0030506.1.mrna1;Target=FBgn0030506.1 311 478 +
Chr1	stalkie_big_nohaplotig	CDS	143809577	143810487	99	-	1	ID=FBgn0030506.1.mrna1.cds4;Name=FBgn0030506.1;Parent=FBgn0030506.1.mrna1;Target=FBgn0030506.1 479 1389 +
Chr1	stalkie_big_nohaplotig	CDS	143809078	143809524	100	-	0	ID=FBgn0030506.1.mrna1.cds5;Name=FBgn0030506.1;Parent=FBgn0030506.1.mrna1;Target=FBgn0030506.1 1390 1836 +
Chr1	stalkie_big_nohaplotig	CDS	143808866	143809009	100	-	0	ID=FBgn0030506.1.mrna1.cds6;Name=FBgn0030506.1;Parent=FBgn0030506.1.mrna1;Target=FBgn0030506.1 1837 1980 +
Chr1	stalkie_big_nohaplotig	CDS	143807056	143807466	97	-	0	ID=FBgn0030506.1.mrna1.cds7;Name=FBgn0030506.1;Parent=FBgn0030506.1.mrna1;Target=FBgn0030506.1 1981 2391 +
Chr1	stalkie_big_nohaplotig	CDS	143806606	143806983	98	-	0	ID=FBgn0030506.1.mrna1.cds8;Name=FBgn0030506.1;Parent=FBgn0030506.1.mrna1;Target=FBgn0030506.1 2392 2769 +
ChrX	stalkie_big_nohaplotig	mRNA	61395132	61395291	.	+	.	ID=ORF2350.mrna1;Name=ORF2350;Parent=ORF2350.path1;Dir=indeterminatecoverage=18.3;identity=100.0;matches=160;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	61395132	61395291	100	+	.	ID=ORF2350.mrna1.exon1;Name=ORF2350;Parent=ORF2350.mrna1;Target=ORF2350 160 1 .
ChrX	stalkie_big_nohaplotig	CDS	61395132	61395291	100	+	0	ID=ORF2350.mrna1.cds1;Name=ORF2350;Parent=ORF2350.mrna1;Target=ORF2350 160 1 .
Chr1	stalkie_big_nohaplotig	mRNA	26579745	26580536	.	+	.	ID=FBgn0035409.1.mrna1;Name=FBgn0035409.1;Parent=FBgn0035409.1.path1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=785;mismatches=7;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	26579745	26580536	99	+	.	ID=FBgn0035409.1.mrna1.exon1;Name=FBgn0035409.1;Parent=FBgn0035409.1.mrna1;Target=FBgn0035409.1 792 1 .
Chr1	stalkie_big_nohaplotig	CDS	26579745	26580536	99	+	0	ID=FBgn0035409.1.mrna1.cds1;Name=FBgn0035409.1;Parent=FBgn0035409.1.mrna1;Target=FBgn0035409.1 792 1 .
ChrX	stalkie_big_nohaplotig	mRNA	16300836	16303736	.	-	.	ID=ORF301.mrna1;Name=ORF301;Parent=ORF301.path1;Dir=sensecoverage=100.0;identity=99.5;matches=2084;mismatches=10;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	16303670	16303736	100	-	.	ID=ORF301.mrna1.exon1;Name=ORF301;Parent=ORF301.mrna1;Target=ORF301 1 67 +
ChrX	stalkie_big_nohaplotig	exon	16300836	16302862	99	-	.	ID=ORF301.mrna1.exon2;Name=ORF301;Parent=ORF301.mrna1;Target=ORF301 68 2094 +
ChrX	stalkie_big_nohaplotig	CDS	16303670	16303736	100	-	0	ID=ORF301.mrna1.cds1;Name=ORF301;Parent=ORF301.mrna1;Target=ORF301 1 67 +
ChrX	stalkie_big_nohaplotig	CDS	16300836	16302862	99	-	1	ID=ORF301.mrna1.cds2;Name=ORF301;Parent=ORF301.mrna1;Target=ORF301 68 2094 +
Chr1	stalkie_big_nohaplotig	mRNA	34408609	34411701	.	-	.	ID=FBgn0011653.1.mrna1;Name=FBgn0011653.1;Parent=FBgn0011653.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=2032;mismatches=11;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	34411530	34411701	100	-	.	ID=FBgn0011653.1.mrna1.exon1;Name=FBgn0011653.1;Parent=FBgn0011653.1.mrna1;Target=FBgn0011653.1 1 172 +
Chr1	stalkie_big_nohaplotig	exon	34411300	34411449	100	-	.	ID=FBgn0011653.1.mrna1.exon2;Name=FBgn0011653.1;Parent=FBgn0011653.1.mrna1;Target=FBgn0011653.1 173 322 +
Chr1	stalkie_big_nohaplotig	exon	34410989	34411243	99	-	.	ID=FBgn0011653.1.mrna1.exon3;Name=FBgn0011653.1;Parent=FBgn0011653.1.mrna1;Target=FBgn0011653.1 323 577 +
Chr1	stalkie_big_nohaplotig	exon	34410240	34410398	98	-	.	ID=FBgn0011653.1.mrna1.exon4;Name=FBgn0011653.1;Parent=FBgn0011653.1.mrna1;Target=FBgn0011653.1 578 736 +
Chr1	stalkie_big_nohaplotig	exon	34410101	34410177	100	-	.	ID=FBgn0011653.1.mrna1.exon5;Name=FBgn0011653.1;Parent=FBgn0011653.1.mrna1;Target=FBgn0011653.1 737 813 +
Chr1	stalkie_big_nohaplotig	exon	34409352	34410046	99	-	.	ID=FBgn0011653.1.mrna1.exon6;Name=FBgn0011653.1;Parent=FBgn0011653.1.mrna1;Target=FBgn0011653.1 814 1508 +
Chr1	stalkie_big_nohaplotig	exon	34409089	34409273	99	-	.	ID=FBgn0011653.1.mrna1.exon7;Name=FBgn0011653.1;Parent=FBgn0011653.1.mrna1;Target=FBgn0011653.1 1509 1693 +
Chr1	stalkie_big_nohaplotig	exon	34408736	34409020	99	-	.	ID=FBgn0011653.1.mrna1.exon8;Name=FBgn0011653.1;Parent=FBgn0011653.1.mrna1;Target=FBgn0011653.1 1694 1978 +
Chr1	stalkie_big_nohaplotig	exon	34408609	34408673	98	-	.	ID=FBgn0011653.1.mrna1.exon9;Name=FBgn0011653.1;Parent=FBgn0011653.1.mrna1;Target=FBgn0011653.1 1979 2043 +
Chr1	stalkie_big_nohaplotig	CDS	34411530	34411701	100	-	0	ID=FBgn0011653.1.mrna1.cds1;Name=FBgn0011653.1;Parent=FBgn0011653.1.mrna1;Target=FBgn0011653.1 1 172 +
Chr1	stalkie_big_nohaplotig	CDS	34411300	34411449	100	-	1	ID=FBgn0011653.1.mrna1.cds2;Name=FBgn0011653.1;Parent=FBgn0011653.1.mrna1;Target=FBgn0011653.1 173 322 +
Chr1	stalkie_big_nohaplotig	CDS	34410989	34411243	99	-	1	ID=FBgn0011653.1.mrna1.cds3;Name=FBgn0011653.1;Parent=FBgn0011653.1.mrna1;Target=FBgn0011653.1 323 577 +
Chr1	stalkie_big_nohaplotig	CDS	34410240	34410398	98	-	1	ID=FBgn0011653.1.mrna1.cds4;Name=FBgn0011653.1;Parent=FBgn0011653.1.mrna1;Target=FBgn0011653.1 578 736 +
Chr1	stalkie_big_nohaplotig	CDS	34410101	34410177	100	-	1	ID=FBgn0011653.1.mrna1.cds5;Name=FBgn0011653.1;Parent=FBgn0011653.1.mrna1;Target=FBgn0011653.1 737 813 +
Chr1	stalkie_big_nohaplotig	CDS	34409352	34410046	99	-	0	ID=FBgn0011653.1.mrna1.cds6;Name=FBgn0011653.1;Parent=FBgn0011653.1.mrna1;Target=FBgn0011653.1 814 1508 +
Chr1	stalkie_big_nohaplotig	CDS	34409089	34409273	99	-	2	ID=FBgn0011653.1.mrna1.cds7;Name=FBgn0011653.1;Parent=FBgn0011653.1.mrna1;Target=FBgn0011653.1 1509 1693 +
Chr1	stalkie_big_nohaplotig	CDS	34408736	34409020	99	-	1	ID=FBgn0011653.1.mrna1.cds8;Name=FBgn0011653.1;Parent=FBgn0011653.1.mrna1;Target=FBgn0011653.1 1694 1978 +
Chr1	stalkie_big_nohaplotig	CDS	34408609	34408673	98	-	1	ID=FBgn0011653.1.mrna1.cds9;Name=FBgn0011653.1;Parent=FBgn0011653.1.mrna1;Target=FBgn0011653.1 1979 2043 +
Chr1	stalkie_big_nohaplotig	mRNA	159113093	159135836	.	+	.	ID=FBgn0029962.1.mrna1;Name=FBgn0029962.1;Parent=FBgn0029962.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=996;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	159113093	159113180	100	+	.	ID=FBgn0029962.1.mrna1.exon1;Name=FBgn0029962.1;Parent=FBgn0029962.1.mrna1;Target=FBgn0029962.1 1 88 +
Chr1	stalkie_big_nohaplotig	exon	159126646	159126693	100	+	.	ID=FBgn0029962.1.mrna1.exon2;Name=FBgn0029962.1;Parent=FBgn0029962.1.mrna1;Target=FBgn0029962.1 89 136 +
Chr1	stalkie_big_nohaplotig	exon	159127929	159128065	100	+	.	ID=FBgn0029962.1.mrna1.exon3;Name=FBgn0029962.1;Parent=FBgn0029962.1.mrna1;Target=FBgn0029962.1 137 273 +
Chr1	stalkie_big_nohaplotig	exon	159128183	159128374	99	+	.	ID=FBgn0029962.1.mrna1.exon4;Name=FBgn0029962.1;Parent=FBgn0029962.1.mrna1;Target=FBgn0029962.1 274 465 +
Chr1	stalkie_big_nohaplotig	exon	159128460	159128622	100	+	.	ID=FBgn0029962.1.mrna1.exon5;Name=FBgn0029962.1;Parent=FBgn0029962.1.mrna1;Target=FBgn0029962.1 466 628 +
Chr1	stalkie_big_nohaplotig	exon	159132420	159132574	100	+	.	ID=FBgn0029962.1.mrna1.exon6;Name=FBgn0029962.1;Parent=FBgn0029962.1.mrna1;Target=FBgn0029962.1 629 783 +
Chr1	stalkie_big_nohaplotig	exon	159135292	159135423	99	+	.	ID=FBgn0029962.1.mrna1.exon7;Name=FBgn0029962.1;Parent=FBgn0029962.1.mrna1;Target=FBgn0029962.1 784 915 +
Chr1	stalkie_big_nohaplotig	exon	159135753	159135836	98	+	.	ID=FBgn0029962.1.mrna1.exon8;Name=FBgn0029962.1;Parent=FBgn0029962.1.mrna1;Target=FBgn0029962.1 916 999 +
Chr1	stalkie_big_nohaplotig	CDS	159113093	159113180	100	+	0	ID=FBgn0029962.1.mrna1.cds1;Name=FBgn0029962.1;Parent=FBgn0029962.1.mrna1;Target=FBgn0029962.1 1 88 +
Chr1	stalkie_big_nohaplotig	CDS	159126646	159126693	100	+	1	ID=FBgn0029962.1.mrna1.cds2;Name=FBgn0029962.1;Parent=FBgn0029962.1.mrna1;Target=FBgn0029962.1 89 136 +
Chr1	stalkie_big_nohaplotig	CDS	159127929	159128065	100	+	1	ID=FBgn0029962.1.mrna1.cds3;Name=FBgn0029962.1;Parent=FBgn0029962.1.mrna1;Target=FBgn0029962.1 137 273 +
Chr1	stalkie_big_nohaplotig	CDS	159128183	159128374	99	+	0	ID=FBgn0029962.1.mrna1.cds4;Name=FBgn0029962.1;Parent=FBgn0029962.1.mrna1;Target=FBgn0029962.1 274 465 +
Chr1	stalkie_big_nohaplotig	CDS	159128460	159128622	100	+	0	ID=FBgn0029962.1.mrna1.cds5;Name=FBgn0029962.1;Parent=FBgn0029962.1.mrna1;Target=FBgn0029962.1 466 628 +
Chr1	stalkie_big_nohaplotig	CDS	159132420	159132574	100	+	1	ID=FBgn0029962.1.mrna1.cds6;Name=FBgn0029962.1;Parent=FBgn0029962.1.mrna1;Target=FBgn0029962.1 629 783 +
Chr1	stalkie_big_nohaplotig	CDS	159135292	159135423	99	+	0	ID=FBgn0029962.1.mrna1.cds7;Name=FBgn0029962.1;Parent=FBgn0029962.1.mrna1;Target=FBgn0029962.1 784 915 +
Chr1	stalkie_big_nohaplotig	CDS	159135753	159135836	98	+	0	ID=FBgn0029962.1.mrna1.cds8;Name=FBgn0029962.1;Parent=FBgn0029962.1.mrna1;Target=FBgn0029962.1 916 999 +
ChrX	stalkie_big_nohaplotig	mRNA	20363567	20367992	.	-	.	ID=FBgn0261648.1.mrna1;Name=FBgn0261648.1;Parent=FBgn0261648.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=4003;mismatches=2;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	20364061	20367992	99	-	.	ID=FBgn0261648.1.mrna1.exon1;Name=FBgn0261648.1;Parent=FBgn0261648.1.mrna1;Target=FBgn0261648.1 1 3932 +
ChrX	stalkie_big_nohaplotig	exon	20363567	20363639	100	-	.	ID=FBgn0261648.1.mrna1.exon2;Name=FBgn0261648.1;Parent=FBgn0261648.1.mrna1;Target=FBgn0261648.1 3933 4005 +
ChrX	stalkie_big_nohaplotig	CDS	20364061	20367992	99	-	0	ID=FBgn0261648.1.mrna1.cds1;Name=FBgn0261648.1;Parent=FBgn0261648.1.mrna1;Target=FBgn0261648.1 1 3932 +
ChrX	stalkie_big_nohaplotig	CDS	20363567	20363639	100	-	2	ID=FBgn0261648.1.mrna1.cds2;Name=FBgn0261648.1;Parent=FBgn0261648.1.mrna1;Target=FBgn0261648.1 3933 4005 +
Chr1	stalkie_big_nohaplotig	mRNA	58558268	58560254	.	+	.	ID=ORF414.mrna1;Name=ORF414;Parent=ORF414.path1;Dir=sensecoverage=100.0;identity=99.2;matches=1857;mismatches=12;indels=3;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	58558268	58558620	98	+	.	ID=ORF414.mrna1.exon1;Name=ORF414;Parent=ORF414.mrna1;Target=ORF414 1 353 +
Chr1	stalkie_big_nohaplotig	exon	58558739	58560254	99	+	.	ID=ORF414.mrna1.exon2;Name=ORF414;Parent=ORF414.mrna1;Target=ORF414 354 1872 +
Chr1	stalkie_big_nohaplotig	CDS	58558268	58558620	98	+	0	ID=ORF414.mrna1.cds1;Name=ORF414;Parent=ORF414.mrna1;Target=ORF414 1 353 +
Chr1	stalkie_big_nohaplotig	CDS	58558739	58560254	99	+	2	ID=ORF414.mrna1.cds2;Name=ORF414;Parent=ORF414.mrna1;Target=ORF414 354 1872 +
Chr1	stalkie_big_nohaplotig	mRNA	156103480	156109951	.	-	.	ID=FBgn0038934.1.mrna1;Name=FBgn0038934.1;Parent=FBgn0038934.1.path1;Dir=sensecoverage=100.0;identity=99.4;matches=4528;mismatches=26;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	156109127	156109951	98	-	.	ID=FBgn0038934.1.mrna1.exon1;Name=FBgn0038934.1;Parent=FBgn0038934.1.mrna1;Target=FBgn0038934.1 1 825 +
Chr1	stalkie_big_nohaplotig	exon	156107073	156109075	99	-	.	ID=FBgn0038934.1.mrna1.exon2;Name=FBgn0038934.1;Parent=FBgn0038934.1.mrna1;Target=FBgn0038934.1 826 2828 +
Chr1	stalkie_big_nohaplotig	exon	156106561	156107002	99	-	.	ID=FBgn0038934.1.mrna1.exon3;Name=FBgn0038934.1;Parent=FBgn0038934.1.mrna1;Target=FBgn0038934.1 2829 3270 +
Chr1	stalkie_big_nohaplotig	exon	156106321	156106495	100	-	.	ID=FBgn0038934.1.mrna1.exon4;Name=FBgn0038934.1;Parent=FBgn0038934.1.mrna1;Target=FBgn0038934.1 3271 3445 +
Chr1	stalkie_big_nohaplotig	exon	156106111	156106254	100	-	.	ID=FBgn0038934.1.mrna1.exon5;Name=FBgn0038934.1;Parent=FBgn0038934.1.mrna1;Target=FBgn0038934.1 3446 3589 +
Chr1	stalkie_big_nohaplotig	exon	156105859	156106049	98	-	.	ID=FBgn0038934.1.mrna1.exon6;Name=FBgn0038934.1;Parent=FBgn0038934.1.mrna1;Target=FBgn0038934.1 3590 3780 +
Chr1	stalkie_big_nohaplotig	exon	156105677	156105801	100	-	.	ID=FBgn0038934.1.mrna1.exon7;Name=FBgn0038934.1;Parent=FBgn0038934.1.mrna1;Target=FBgn0038934.1 3781 3905 +
Chr1	stalkie_big_nohaplotig	exon	156105042	156105157	99	-	.	ID=FBgn0038934.1.mrna1.exon8;Name=FBgn0038934.1;Parent=FBgn0038934.1.mrna1;Target=FBgn0038934.1 3906 4021 +
Chr1	stalkie_big_nohaplotig	exon	156103480	156104012	99	-	.	ID=FBgn0038934.1.mrna1.exon9;Name=FBgn0038934.1;Parent=FBgn0038934.1.mrna1;Target=FBgn0038934.1 4022 4554 +
Chr1	stalkie_big_nohaplotig	CDS	156109127	156109951	98	-	0	ID=FBgn0038934.1.mrna1.cds1;Name=FBgn0038934.1;Parent=FBgn0038934.1.mrna1;Target=FBgn0038934.1 1 825 +
Chr1	stalkie_big_nohaplotig	CDS	156107073	156109075	99	-	0	ID=FBgn0038934.1.mrna1.cds2;Name=FBgn0038934.1;Parent=FBgn0038934.1.mrna1;Target=FBgn0038934.1 826 2828 +
Chr1	stalkie_big_nohaplotig	CDS	156106561	156107002	99	-	2	ID=FBgn0038934.1.mrna1.cds3;Name=FBgn0038934.1;Parent=FBgn0038934.1.mrna1;Target=FBgn0038934.1 2829 3270 +
Chr1	stalkie_big_nohaplotig	CDS	156106321	156106495	100	-	0	ID=FBgn0038934.1.mrna1.cds4;Name=FBgn0038934.1;Parent=FBgn0038934.1.mrna1;Target=FBgn0038934.1 3271 3445 +
Chr1	stalkie_big_nohaplotig	CDS	156106111	156106254	100	-	1	ID=FBgn0038934.1.mrna1.cds5;Name=FBgn0038934.1;Parent=FBgn0038934.1.mrna1;Target=FBgn0038934.1 3446 3589 +
Chr1	stalkie_big_nohaplotig	CDS	156105859	156106049	98	-	1	ID=FBgn0038934.1.mrna1.cds6;Name=FBgn0038934.1;Parent=FBgn0038934.1.mrna1;Target=FBgn0038934.1 3590 3780 +
Chr1	stalkie_big_nohaplotig	CDS	156105677	156105801	100	-	0	ID=FBgn0038934.1.mrna1.cds7;Name=FBgn0038934.1;Parent=FBgn0038934.1.mrna1;Target=FBgn0038934.1 3781 3905 +
Chr1	stalkie_big_nohaplotig	CDS	156105042	156105157	99	-	2	ID=FBgn0038934.1.mrna1.cds8;Name=FBgn0038934.1;Parent=FBgn0038934.1.mrna1;Target=FBgn0038934.1 3906 4021 +
Chr1	stalkie_big_nohaplotig	CDS	156103480	156104012	99	-	1	ID=FBgn0038934.1.mrna1.cds9;Name=FBgn0038934.1;Parent=FBgn0038934.1.mrna1;Target=FBgn0038934.1 4022 4554 +
Chr2	stalkie_big_nohaplotig	mRNA	59411018	59451590	.	+	.	ID=FBgn0034071.1.mrna1;Name=FBgn0034071.1;Parent=FBgn0034071.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=3015;mismatches=9;indels=12;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	59411018	59411200	100	+	.	ID=FBgn0034071.1.mrna1.exon1;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 1 183 +
Chr2	stalkie_big_nohaplotig	exon	59411842	59411924	100	+	.	ID=FBgn0034071.1.mrna1.exon2;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 184 266 +
Chr2	stalkie_big_nohaplotig	exon	59411996	59412142	100	+	.	ID=FBgn0034071.1.mrna1.exon3;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 267 413 +
Chr2	stalkie_big_nohaplotig	exon	59412317	59412409	100	+	.	ID=FBgn0034071.1.mrna1.exon4;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 414 506 +
Chr2	stalkie_big_nohaplotig	exon	59412472	59412680	100	+	.	ID=FBgn0034071.1.mrna1.exon5;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 507 715 +
Chr2	stalkie_big_nohaplotig	exon	59412737	59412902	98	+	.	ID=FBgn0034071.1.mrna1.exon6;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 716 881 +
Chr2	stalkie_big_nohaplotig	exon	59412964	59413126	98	+	.	ID=FBgn0034071.1.mrna1.exon7;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 882 1044 +
Chr2	stalkie_big_nohaplotig	exon	59413189	59413246	100	+	.	ID=FBgn0034071.1.mrna1.exon8;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 1045 1102 +
Chr2	stalkie_big_nohaplotig	exon	59413321	59413404	100	+	.	ID=FBgn0034071.1.mrna1.exon9;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 1103 1186 +
Chr2	stalkie_big_nohaplotig	exon	59413462	59413594	99	+	.	ID=FBgn0034071.1.mrna1.exon10;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 1187 1319 +
Chr2	stalkie_big_nohaplotig	exon	59439087	59439186	100	+	.	ID=FBgn0034071.1.mrna1.exon11;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 1320 1419 +
Chr2	stalkie_big_nohaplotig	exon	59443016	59443697	100	+	.	ID=FBgn0034071.1.mrna1.exon12;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 1420 2101 +
Chr2	stalkie_big_nohaplotig	exon	59450659	59451590	98	+	.	ID=FBgn0034071.1.mrna1.exon13;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 2102 3027 +
Chr2	stalkie_big_nohaplotig	CDS	59411018	59411200	100	+	0	ID=FBgn0034071.1.mrna1.cds1;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 1 183 +
Chr2	stalkie_big_nohaplotig	CDS	59411842	59411924	100	+	0	ID=FBgn0034071.1.mrna1.cds2;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 184 266 +
Chr2	stalkie_big_nohaplotig	CDS	59411996	59412142	100	+	2	ID=FBgn0034071.1.mrna1.cds3;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 267 413 +
Chr2	stalkie_big_nohaplotig	CDS	59412317	59412409	100	+	2	ID=FBgn0034071.1.mrna1.cds4;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 414 506 +
Chr2	stalkie_big_nohaplotig	CDS	59412472	59412680	100	+	2	ID=FBgn0034071.1.mrna1.cds5;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 507 715 +
Chr2	stalkie_big_nohaplotig	CDS	59412737	59412902	98	+	1	ID=FBgn0034071.1.mrna1.cds6;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 716 881 +
Chr2	stalkie_big_nohaplotig	CDS	59412964	59413126	98	+	2	ID=FBgn0034071.1.mrna1.cds7;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 882 1044 +
Chr2	stalkie_big_nohaplotig	CDS	59413189	59413246	100	+	0	ID=FBgn0034071.1.mrna1.cds8;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 1045 1102 +
Chr2	stalkie_big_nohaplotig	CDS	59413321	59413404	100	+	1	ID=FBgn0034071.1.mrna1.cds9;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 1103 1186 +
Chr2	stalkie_big_nohaplotig	CDS	59413462	59413594	99	+	1	ID=FBgn0034071.1.mrna1.cds10;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 1187 1319 +
Chr2	stalkie_big_nohaplotig	CDS	59439087	59439186	100	+	2	ID=FBgn0034071.1.mrna1.cds11;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 1320 1419 +
Chr2	stalkie_big_nohaplotig	CDS	59443016	59443697	100	+	0	ID=FBgn0034071.1.mrna1.cds12;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 1420 2101 +
Chr2	stalkie_big_nohaplotig	CDS	59450659	59451590	98	+	1	ID=FBgn0034071.1.mrna1.cds13;Name=FBgn0034071.1;Parent=FBgn0034071.1.mrna1;Target=FBgn0034071.1 2102 3027 +
Chr2	stalkie_big_nohaplotig	mRNA	32914512	32931597	.	+	.	ID=FBgn0040777.1.mrna1;Name=FBgn0040777.1;Parent=FBgn0040777.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1227;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	32914512	32914688	100	+	.	ID=FBgn0040777.1.mrna1.exon1;Name=FBgn0040777.1;Parent=FBgn0040777.1.mrna1;Target=FBgn0040777.1 1 177 +
Chr2	stalkie_big_nohaplotig	exon	32920504	32920512	100	+	.	ID=FBgn0040777.1.mrna1.exon2;Name=FBgn0040777.1;Parent=FBgn0040777.1.mrna1;Target=FBgn0040777.1 178 186 +
Chr2	stalkie_big_nohaplotig	exon	32929956	32930133	99	+	.	ID=FBgn0040777.1.mrna1.exon3;Name=FBgn0040777.1;Parent=FBgn0040777.1.mrna1;Target=FBgn0040777.1 187 364 +
Chr2	stalkie_big_nohaplotig	exon	32930667	32930805	100	+	.	ID=FBgn0040777.1.mrna1.exon4;Name=FBgn0040777.1;Parent=FBgn0040777.1.mrna1;Target=FBgn0040777.1 365 503 +
Chr2	stalkie_big_nohaplotig	exon	32930871	32931597	99	+	.	ID=FBgn0040777.1.mrna1.exon5;Name=FBgn0040777.1;Parent=FBgn0040777.1.mrna1;Target=FBgn0040777.1 504 1230 +
Chr2	stalkie_big_nohaplotig	CDS	32914512	32914688	100	+	0	ID=FBgn0040777.1.mrna1.cds1;Name=FBgn0040777.1;Parent=FBgn0040777.1.mrna1;Target=FBgn0040777.1 1 177 +
Chr2	stalkie_big_nohaplotig	CDS	32920504	32920512	100	+	0	ID=FBgn0040777.1.mrna1.cds2;Name=FBgn0040777.1;Parent=FBgn0040777.1.mrna1;Target=FBgn0040777.1 178 186 +
Chr2	stalkie_big_nohaplotig	CDS	32929956	32930133	99	+	0	ID=FBgn0040777.1.mrna1.cds3;Name=FBgn0040777.1;Parent=FBgn0040777.1.mrna1;Target=FBgn0040777.1 187 364 +
Chr2	stalkie_big_nohaplotig	CDS	32930667	32930805	100	+	1	ID=FBgn0040777.1.mrna1.cds4;Name=FBgn0040777.1;Parent=FBgn0040777.1.mrna1;Target=FBgn0040777.1 365 503 +
Chr2	stalkie_big_nohaplotig	CDS	32930871	32931597	99	+	2	ID=FBgn0040777.1.mrna1.cds5;Name=FBgn0040777.1;Parent=FBgn0040777.1.mrna1;Target=FBgn0040777.1 504 1230 +
Chr1	stalkie_big_nohaplotig	mRNA	47305209	47349612	.	-	.	ID=FBgn0262509.1.mrna1;Name=FBgn0262509.1;Parent=FBgn0262509.1.path1;Dir=sensecoverage=83.7;identity=99.7;matches=2738;mismatches=8;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	47349462	47349612	100	-	.	ID=FBgn0262509.1.mrna1.exon1;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 292 442 +
Chr1	stalkie_big_nohaplotig	exon	47346368	47346538	99	-	.	ID=FBgn0262509.1.mrna1.exon2;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 443 613 +
Chr1	stalkie_big_nohaplotig	exon	47340113	47340271	98	-	.	ID=FBgn0262509.1.mrna1.exon3;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 614 772 +
Chr1	stalkie_big_nohaplotig	exon	47339346	47339422	100	-	.	ID=FBgn0262509.1.mrna1.exon4;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 773 849 +
Chr1	stalkie_big_nohaplotig	exon	47336320	47336418	100	-	.	ID=FBgn0262509.1.mrna1.exon5;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 850 948 +
Chr1	stalkie_big_nohaplotig	exon	47335985	47336144	100	-	.	ID=FBgn0262509.1.mrna1.exon6;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 949 1108 +
Chr1	stalkie_big_nohaplotig	exon	47335748	47335859	100	-	.	ID=FBgn0262509.1.mrna1.exon7;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 1109 1220 +
Chr1	stalkie_big_nohaplotig	exon	47325955	47326136	100	-	.	ID=FBgn0262509.1.mrna1.exon8;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 1221 1402 +
Chr1	stalkie_big_nohaplotig	exon	47325593	47325768	99	-	.	ID=FBgn0262509.1.mrna1.exon9;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 1403 1578 +
Chr1	stalkie_big_nohaplotig	exon	47325095	47325226	98	-	.	ID=FBgn0262509.1.mrna1.exon10;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 1579 1710 +
Chr1	stalkie_big_nohaplotig	exon	47323101	47323216	100	-	.	ID=FBgn0262509.1.mrna1.exon11;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 1711 1826 +
Chr1	stalkie_big_nohaplotig	exon	47322203	47322587	99	-	.	ID=FBgn0262509.1.mrna1.exon12;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 1827 2211 +
Chr1	stalkie_big_nohaplotig	exon	47319959	47320088	100	-	.	ID=FBgn0262509.1.mrna1.exon13;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 2212 2341 +
Chr1	stalkie_big_nohaplotig	exon	47319688	47319783	100	-	.	ID=FBgn0262509.1.mrna1.exon14;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 2342 2437 +
Chr1	stalkie_big_nohaplotig	exon	47319012	47319170	100	-	.	ID=FBgn0262509.1.mrna1.exon15;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 2438 2596 +
Chr1	stalkie_big_nohaplotig	exon	47318427	47318509	100	-	.	ID=FBgn0262509.1.mrna1.exon16;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 2597 2679 +
Chr1	stalkie_big_nohaplotig	exon	47314441	47314627	100	-	.	ID=FBgn0262509.1.mrna1.exon17;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 2680 2866 +
Chr1	stalkie_big_nohaplotig	exon	47310811	47310840	100	-	.	ID=FBgn0262509.1.mrna1.exon18;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 2867 2896 +
Chr1	stalkie_big_nohaplotig	exon	47305209	47305349	99	-	.	ID=FBgn0262509.1.mrna1.exon19;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 2897 3037 +
Chr1	stalkie_big_nohaplotig	CDS	47349462	47349612	100	-	0	ID=FBgn0262509.1.mrna1.cds1;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 292 442 +
Chr1	stalkie_big_nohaplotig	CDS	47346368	47346538	99	-	1	ID=FBgn0262509.1.mrna1.cds2;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 443 613 +
Chr1	stalkie_big_nohaplotig	CDS	47340113	47340271	98	-	1	ID=FBgn0262509.1.mrna1.cds3;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 614 772 +
Chr1	stalkie_big_nohaplotig	CDS	47339346	47339422	100	-	1	ID=FBgn0262509.1.mrna1.cds4;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 773 849 +
Chr1	stalkie_big_nohaplotig	CDS	47336320	47336418	100	-	0	ID=FBgn0262509.1.mrna1.cds5;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 850 948 +
Chr1	stalkie_big_nohaplotig	CDS	47335985	47336144	100	-	0	ID=FBgn0262509.1.mrna1.cds6;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 949 1108 +
Chr1	stalkie_big_nohaplotig	CDS	47335748	47335859	100	-	1	ID=FBgn0262509.1.mrna1.cds7;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 1109 1220 +
Chr1	stalkie_big_nohaplotig	CDS	47325955	47326136	100	-	2	ID=FBgn0262509.1.mrna1.cds8;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 1221 1402 +
Chr1	stalkie_big_nohaplotig	CDS	47325593	47325768	99	-	1	ID=FBgn0262509.1.mrna1.cds9;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 1403 1578 +
Chr1	stalkie_big_nohaplotig	CDS	47325095	47325226	98	-	0	ID=FBgn0262509.1.mrna1.cds10;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 1579 1710 +
Chr1	stalkie_big_nohaplotig	CDS	47323101	47323216	100	-	0	ID=FBgn0262509.1.mrna1.cds11;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 1711 1826 +
Chr1	stalkie_big_nohaplotig	CDS	47322203	47322587	99	-	2	ID=FBgn0262509.1.mrna1.cds12;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 1827 2211 +
Chr1	stalkie_big_nohaplotig	CDS	47319959	47320088	100	-	0	ID=FBgn0262509.1.mrna1.cds13;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 2212 2341 +
Chr1	stalkie_big_nohaplotig	CDS	47319688	47319783	100	-	1	ID=FBgn0262509.1.mrna1.cds14;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 2342 2437 +
Chr1	stalkie_big_nohaplotig	CDS	47319012	47319170	100	-	1	ID=FBgn0262509.1.mrna1.cds15;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 2438 2596 +
Chr1	stalkie_big_nohaplotig	CDS	47318427	47318509	100	-	1	ID=FBgn0262509.1.mrna1.cds16;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 2597 2679 +
Chr1	stalkie_big_nohaplotig	CDS	47314441	47314627	100	-	0	ID=FBgn0262509.1.mrna1.cds17;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 2680 2866 +
Chr1	stalkie_big_nohaplotig	CDS	47310811	47310840	100	-	1	ID=FBgn0262509.1.mrna1.cds18;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 2867 2896 +
Chr1	stalkie_big_nohaplotig	CDS	47305210	47305349	99	-	1	ID=FBgn0262509.1.mrna1.cds19;Name=FBgn0262509.1;Parent=FBgn0262509.1.mrna1;Target=FBgn0262509.1 2897 3036 +
ChrX	stalkie_big_nohaplotig	mRNA	7597954	7598681	.	+	.	ID=ORF2525.mrna1;Name=ORF2525;Parent=ORF2525.path1;Dir=indeterminatecoverage=86.1;identity=99.3;matches=723;mismatches=5;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	7597954	7598681	99	+	.	ID=ORF2525.mrna1.exon1;Name=ORF2525;Parent=ORF2525.mrna1;Target=ORF2525 728 1 .
ChrX	stalkie_big_nohaplotig	CDS	7597954	7598679	99	+	0	ID=ORF2525.mrna1.cds1;Name=ORF2525;Parent=ORF2525.mrna1;Target=ORF2525 726 1 .
Chr2	stalkie_big_nohaplotig	mRNA	12206597	12207445	.	+	.	ID=ORF2502.mrna1;Name=ORF2502;Parent=ORF2502.path1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=838;mismatches=11;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	12206597	12207445	98	+	.	ID=ORF2502.mrna1.exon1;Name=ORF2502;Parent=ORF2502.mrna1;Target=ORF2502 849 1 .
Chr2	stalkie_big_nohaplotig	CDS	12206597	12207445	98	+	0	ID=ORF2502.mrna1.cds1;Name=ORF2502;Parent=ORF2502.mrna1;Target=ORF2502 849 1 .
Chr1	stalkie_big_nohaplotig	mRNA	118610790	118611030	.	+	.	ID=AGAP002778.mrna2;Name=AGAP002778;Parent=AGAP002778.path2;Dir=indeterminatecoverage=99.2;identity=91.2;matches=228;mismatches=13;indels=9;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	118610790	118611030	91	+	.	ID=AGAP002778.mrna2.exon1;Name=AGAP002778;Parent=AGAP002778.mrna2;Target=AGAP002778 250 1 .
Chr1	stalkie_big_nohaplotig	CDS	118610905	118611018	83	+	0	ID=AGAP002778.mrna2.cds1;Name=AGAP002778;Parent=AGAP002778.mrna2;Target=AGAP002778 238 116 .
Chr1	stalkie_big_nohaplotig	mRNA	137341602	137435710	.	+	.	ID=FBgn0015519.1.mrna1;Name=FBgn0015519.1;Parent=FBgn0015519.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=2349;mismatches=9;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	137341602	137341743	100	+	.	ID=FBgn0015519.1.mrna1.exon1;Name=FBgn0015519.1;Parent=FBgn0015519.1.mrna1;Target=FBgn0015519.1 1 142 +
Chr1	stalkie_big_nohaplotig	exon	137381841	137382135	100	+	.	ID=FBgn0015519.1.mrna1.exon2;Name=FBgn0015519.1;Parent=FBgn0015519.1.mrna1;Target=FBgn0015519.1 143 437 +
Chr1	stalkie_big_nohaplotig	exon	137384374	137384554	99	+	.	ID=FBgn0015519.1.mrna1.exon3;Name=FBgn0015519.1;Parent=FBgn0015519.1.mrna1;Target=FBgn0015519.1 438 618 +
Chr1	stalkie_big_nohaplotig	exon	137393001	137393116	100	+	.	ID=FBgn0015519.1.mrna1.exon4;Name=FBgn0015519.1;Parent=FBgn0015519.1.mrna1;Target=FBgn0015519.1 619 734 +
Chr1	stalkie_big_nohaplotig	exon	137408388	137408556	99	+	.	ID=FBgn0015519.1.mrna1.exon5;Name=FBgn0015519.1;Parent=FBgn0015519.1.mrna1;Target=FBgn0015519.1 735 903 +
Chr1	stalkie_big_nohaplotig	exon	137419696	137419832	99	+	.	ID=FBgn0015519.1.mrna1.exon6;Name=FBgn0015519.1;Parent=FBgn0015519.1.mrna1;Target=FBgn0015519.1 904 1040 +
Chr1	stalkie_big_nohaplotig	exon	137424414	137424560	99	+	.	ID=FBgn0015519.1.mrna1.exon7;Name=FBgn0015519.1;Parent=FBgn0015519.1.mrna1;Target=FBgn0015519.1 1041 1187 +
Chr1	stalkie_big_nohaplotig	exon	137424641	137424733	100	+	.	ID=FBgn0015519.1.mrna1.exon8;Name=FBgn0015519.1;Parent=FBgn0015519.1.mrna1;Target=FBgn0015519.1 1188 1280 +
Chr1	stalkie_big_nohaplotig	exon	137424830	137425709	99	+	.	ID=FBgn0015519.1.mrna1.exon9;Name=FBgn0015519.1;Parent=FBgn0015519.1.mrna1;Target=FBgn0015519.1 1281 2160 +
Chr1	stalkie_big_nohaplotig	exon	137435513	137435710	100	+	.	ID=FBgn0015519.1.mrna1.exon10;Name=FBgn0015519.1;Parent=FBgn0015519.1.mrna1;Target=FBgn0015519.1 2161 2358 +
Chr1	stalkie_big_nohaplotig	CDS	137341602	137341743	100	+	0	ID=FBgn0015519.1.mrna1.cds1;Name=FBgn0015519.1;Parent=FBgn0015519.1.mrna1;Target=FBgn0015519.1 1 142 +
Chr1	stalkie_big_nohaplotig	CDS	137381841	137382135	100	+	1	ID=FBgn0015519.1.mrna1.cds2;Name=FBgn0015519.1;Parent=FBgn0015519.1.mrna1;Target=FBgn0015519.1 143 437 +
Chr1	stalkie_big_nohaplotig	CDS	137384374	137384554	99	+	2	ID=FBgn0015519.1.mrna1.cds3;Name=FBgn0015519.1;Parent=FBgn0015519.1.mrna1;Target=FBgn0015519.1 438 618 +
Chr1	stalkie_big_nohaplotig	CDS	137393001	137393116	100	+	0	ID=FBgn0015519.1.mrna1.cds4;Name=FBgn0015519.1;Parent=FBgn0015519.1.mrna1;Target=FBgn0015519.1 619 734 +
Chr1	stalkie_big_nohaplotig	CDS	137408388	137408556	99	+	2	ID=FBgn0015519.1.mrna1.cds5;Name=FBgn0015519.1;Parent=FBgn0015519.1.mrna1;Target=FBgn0015519.1 735 903 +
Chr1	stalkie_big_nohaplotig	CDS	137419696	137419832	99	+	0	ID=FBgn0015519.1.mrna1.cds6;Name=FBgn0015519.1;Parent=FBgn0015519.1.mrna1;Target=FBgn0015519.1 904 1040 +
Chr1	stalkie_big_nohaplotig	CDS	137424414	137424560	99	+	2	ID=FBgn0015519.1.mrna1.cds7;Name=FBgn0015519.1;Parent=FBgn0015519.1.mrna1;Target=FBgn0015519.1 1041 1187 +
Chr1	stalkie_big_nohaplotig	CDS	137424641	137424733	100	+	2	ID=FBgn0015519.1.mrna1.cds8;Name=FBgn0015519.1;Parent=FBgn0015519.1.mrna1;Target=FBgn0015519.1 1188 1280 +
Chr1	stalkie_big_nohaplotig	CDS	137424830	137425709	99	+	2	ID=FBgn0015519.1.mrna1.cds9;Name=FBgn0015519.1;Parent=FBgn0015519.1.mrna1;Target=FBgn0015519.1 1281 2160 +
Chr1	stalkie_big_nohaplotig	CDS	137435513	137435710	100	+	0	ID=FBgn0015519.1.mrna1.cds10;Name=FBgn0015519.1;Parent=FBgn0015519.1.mrna1;Target=FBgn0015519.1 2161 2358 +
Chr2	stalkie_big_nohaplotig	mRNA	93969837	93971098	.	+	.	ID=ORF1048.mrna1;Name=ORF1048;Parent=ORF1048.path1;Dir=indeterminatecoverage=99.7;identity=99.4;matches=1254;mismatches=8;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	93969837	93971098	99	+	.	ID=ORF1048.mrna1.exon1;Name=ORF1048;Parent=ORF1048.mrna1;Target=ORF1048 1266 5 .
Chr2	stalkie_big_nohaplotig	CDS	93969839	93971098	99	+	0	ID=ORF1048.mrna1.cds1;Name=ORF1048;Parent=ORF1048.mrna1;Target=ORF1048 1266 7 .
Chr1	stalkie_big_nohaplotig	mRNA	112547607	112549833	.	+	.	ID=ORF254.mrna1;Name=ORF254;Parent=ORF254.path1;Dir=indeterminatecoverage=100.0;identity=96.0;matches=2165;mismatches=47;indels=43;unknowns=2
Chr1	stalkie_big_nohaplotig	exon	112547607	112549833	96	+	.	ID=ORF254.mrna1.exon1;Name=ORF254;Parent=ORF254.mrna1;Target=ORF254 2244 1 .
Chr1	stalkie_big_nohaplotig	CDS	112547607	112549833	96	+	0	ID=ORF254.mrna1.cds1;Name=ORF254;Parent=ORF254.mrna1;Target=ORF254 2244 1 .
Chr2	stalkie_big_nohaplotig	mRNA	36962488	36965503	.	+	.	ID=FBgn0034722.1.mrna1;Name=FBgn0034722.1;Parent=FBgn0034722.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2336;mismatches=4;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	36962488	36962586	100	+	.	ID=FBgn0034722.1.mrna1.exon1;Name=FBgn0034722.1;Parent=FBgn0034722.1.mrna1;Target=FBgn0034722.1 1 99 +
Chr2	stalkie_big_nohaplotig	exon	36962646	36963597	100	+	.	ID=FBgn0034722.1.mrna1.exon2;Name=FBgn0034722.1;Parent=FBgn0034722.1.mrna1;Target=FBgn0034722.1 100 1051 +
Chr2	stalkie_big_nohaplotig	exon	36964155	36965339	99	+	.	ID=FBgn0034722.1.mrna1.exon3;Name=FBgn0034722.1;Parent=FBgn0034722.1.mrna1;Target=FBgn0034722.1 1052 2236 +
Chr2	stalkie_big_nohaplotig	exon	36965400	36965503	100	+	.	ID=FBgn0034722.1.mrna1.exon4;Name=FBgn0034722.1;Parent=FBgn0034722.1.mrna1;Target=FBgn0034722.1 2237 2340 +
Chr2	stalkie_big_nohaplotig	CDS	36962488	36962586	100	+	0	ID=FBgn0034722.1.mrna1.cds1;Name=FBgn0034722.1;Parent=FBgn0034722.1.mrna1;Target=FBgn0034722.1 1 99 +
Chr2	stalkie_big_nohaplotig	CDS	36962646	36963597	100	+	0	ID=FBgn0034722.1.mrna1.cds2;Name=FBgn0034722.1;Parent=FBgn0034722.1.mrna1;Target=FBgn0034722.1 100 1051 +
Chr2	stalkie_big_nohaplotig	CDS	36964155	36965339	99	+	1	ID=FBgn0034722.1.mrna1.cds3;Name=FBgn0034722.1;Parent=FBgn0034722.1.mrna1;Target=FBgn0034722.1 1052 2236 +
Chr2	stalkie_big_nohaplotig	CDS	36965400	36965503	100	+	1	ID=FBgn0034722.1.mrna1.cds4;Name=FBgn0034722.1;Parent=FBgn0034722.1.mrna1;Target=FBgn0034722.1 2237 2340 +
Chr1	stalkie_big_nohaplotig	mRNA	117087904	117091327	.	+	.	ID=ORF1286.mrna1;Name=ORF1286;Parent=ORF1286.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1151;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	117087904	117088364	100	+	.	ID=ORF1286.mrna1.exon1;Name=ORF1286;Parent=ORF1286.mrna1;Target=ORF1286 1 461 +
Chr1	stalkie_big_nohaplotig	exon	117088442	117088614	100	+	.	ID=ORF1286.mrna1.exon2;Name=ORF1286;Parent=ORF1286.mrna1;Target=ORF1286 462 634 +
Chr1	stalkie_big_nohaplotig	exon	117088686	117088870	99	+	.	ID=ORF1286.mrna1.exon3;Name=ORF1286;Parent=ORF1286.mrna1;Target=ORF1286 635 819 +
Chr1	stalkie_big_nohaplotig	exon	117088952	117089176	98	+	.	ID=ORF1286.mrna1.exon4;Name=ORF1286;Parent=ORF1286.mrna1;Target=ORF1286 820 1044 +
Chr1	stalkie_big_nohaplotig	exon	117091217	117091327	100	+	.	ID=ORF1286.mrna1.exon5;Name=ORF1286;Parent=ORF1286.mrna1;Target=ORF1286 1045 1155 +
Chr1	stalkie_big_nohaplotig	CDS	117087904	117088364	100	+	0	ID=ORF1286.mrna1.cds1;Name=ORF1286;Parent=ORF1286.mrna1;Target=ORF1286 1 461 +
Chr1	stalkie_big_nohaplotig	CDS	117088442	117088614	100	+	2	ID=ORF1286.mrna1.cds2;Name=ORF1286;Parent=ORF1286.mrna1;Target=ORF1286 462 634 +
Chr1	stalkie_big_nohaplotig	CDS	117088686	117088870	99	+	1	ID=ORF1286.mrna1.cds3;Name=ORF1286;Parent=ORF1286.mrna1;Target=ORF1286 635 819 +
Chr1	stalkie_big_nohaplotig	CDS	117088952	117089176	98	+	0	ID=ORF1286.mrna1.cds4;Name=ORF1286;Parent=ORF1286.mrna1;Target=ORF1286 820 1044 +
Chr1	stalkie_big_nohaplotig	CDS	117091217	117091327	100	+	0	ID=ORF1286.mrna1.cds5;Name=ORF1286;Parent=ORF1286.mrna1;Target=ORF1286 1045 1155 +
ChrX	stalkie_big_nohaplotig	mRNA	21390303	21390719	.	+	.	ID=FBgn0040070.1.mrna1;Name=FBgn0040070.1;Parent=FBgn0040070.1.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=417;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	21390303	21390719	100	+	.	ID=FBgn0040070.1.mrna1.exon1;Name=FBgn0040070.1;Parent=FBgn0040070.1.mrna1;Target=FBgn0040070.1 417 1 .
ChrX	stalkie_big_nohaplotig	CDS	21390303	21390719	100	+	0	ID=FBgn0040070.1.mrna1.cds1;Name=FBgn0040070.1;Parent=FBgn0040070.1.mrna1;Target=FBgn0040070.1 417 1 .
Chr1	stalkie_big_nohaplotig	mRNA	126303733	126311178	.	-	.	ID=FBgn0003321.1.mrna1;Name=FBgn0003321.1;Parent=FBgn0003321.1.path1;Dir=sensecoverage=83.4;identity=99.6;matches=1722;mismatches=7;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	126310656	126311178	98	-	.	ID=FBgn0003321.1.mrna1.exon1;Name=FBgn0003321.1;Parent=FBgn0003321.1.mrna1;Target=FBgn0003321.1 345 867 +
Chr1	stalkie_big_nohaplotig	exon	126310470	126310579	100	-	.	ID=FBgn0003321.1.mrna1.exon2;Name=FBgn0003321.1;Parent=FBgn0003321.1.mrna1;Target=FBgn0003321.1 868 977 +
Chr1	stalkie_big_nohaplotig	exon	126305896	126305932	100	-	.	ID=FBgn0003321.1.mrna1.exon3;Name=FBgn0003321.1;Parent=FBgn0003321.1.mrna1;Target=FBgn0003321.1 978 1014 +
Chr1	stalkie_big_nohaplotig	exon	126305589	126305815	100	-	.	ID=FBgn0003321.1.mrna1.exon4;Name=FBgn0003321.1;Parent=FBgn0003321.1.mrna1;Target=FBgn0003321.1 1015 1241 +
Chr1	stalkie_big_nohaplotig	exon	126305364	126305532	100	-	.	ID=FBgn0003321.1.mrna1.exon5;Name=FBgn0003321.1;Parent=FBgn0003321.1.mrna1;Target=FBgn0003321.1 1242 1410 +
Chr1	stalkie_big_nohaplotig	exon	126304245	126304523	99	-	.	ID=FBgn0003321.1.mrna1.exon6;Name=FBgn0003321.1;Parent=FBgn0003321.1.mrna1;Target=FBgn0003321.1 1411 1689 +
Chr1	stalkie_big_nohaplotig	exon	126303896	126304179	100	-	.	ID=FBgn0003321.1.mrna1.exon7;Name=FBgn0003321.1;Parent=FBgn0003321.1.mrna1;Target=FBgn0003321.1 1690 1973 +
Chr1	stalkie_big_nohaplotig	exon	126303733	126303832	100	-	.	ID=FBgn0003321.1.mrna1.exon8;Name=FBgn0003321.1;Parent=FBgn0003321.1.mrna1;Target=FBgn0003321.1 1974 2073 +
Chr1	stalkie_big_nohaplotig	CDS	126310656	126311177	98	-	0	ID=FBgn0003321.1.mrna1.cds1;Name=FBgn0003321.1;Parent=FBgn0003321.1.mrna1;Target=FBgn0003321.1 346 867 +
Chr1	stalkie_big_nohaplotig	CDS	126310470	126310579	100	-	0	ID=FBgn0003321.1.mrna1.cds2;Name=FBgn0003321.1;Parent=FBgn0003321.1.mrna1;Target=FBgn0003321.1 868 977 +
Chr1	stalkie_big_nohaplotig	CDS	126305896	126305932	100	-	2	ID=FBgn0003321.1.mrna1.cds3;Name=FBgn0003321.1;Parent=FBgn0003321.1.mrna1;Target=FBgn0003321.1 978 1014 +
Chr1	stalkie_big_nohaplotig	CDS	126305589	126305815	100	-	0	ID=FBgn0003321.1.mrna1.cds4;Name=FBgn0003321.1;Parent=FBgn0003321.1.mrna1;Target=FBgn0003321.1 1015 1241 +
Chr1	stalkie_big_nohaplotig	CDS	126305364	126305532	100	-	2	ID=FBgn0003321.1.mrna1.cds5;Name=FBgn0003321.1;Parent=FBgn0003321.1.mrna1;Target=FBgn0003321.1 1242 1410 +
Chr1	stalkie_big_nohaplotig	CDS	126304245	126304523	99	-	0	ID=FBgn0003321.1.mrna1.cds6;Name=FBgn0003321.1;Parent=FBgn0003321.1.mrna1;Target=FBgn0003321.1 1411 1689 +
Chr1	stalkie_big_nohaplotig	CDS	126303896	126304179	100	-	0	ID=FBgn0003321.1.mrna1.cds7;Name=FBgn0003321.1;Parent=FBgn0003321.1.mrna1;Target=FBgn0003321.1 1690 1973 +
Chr1	stalkie_big_nohaplotig	CDS	126303733	126303832	100	-	2	ID=FBgn0003321.1.mrna1.cds8;Name=FBgn0003321.1;Parent=FBgn0003321.1.mrna1;Target=FBgn0003321.1 1974 2073 +
Chr1	stalkie_big_nohaplotig	mRNA	48133171	48139385	.	+	.	ID=FBgn0036229.1.mrna1;Name=FBgn0036229.1;Parent=FBgn0036229.1.path1;Dir=sensecoverage=99.7;identity=100.0;matches=2979;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	48133171	48133186	100	+	.	ID=FBgn0036229.1.mrna1.exon1;Name=FBgn0036229.1;Parent=FBgn0036229.1.mrna1;Target=FBgn0036229.1 1 16 +
Chr1	stalkie_big_nohaplotig	exon	48136423	48139385	100	+	.	ID=FBgn0036229.1.mrna1.exon2;Name=FBgn0036229.1;Parent=FBgn0036229.1.mrna1;Target=FBgn0036229.1 17 2979 +
Chr1	stalkie_big_nohaplotig	CDS	48133171	48133186	100	+	0	ID=FBgn0036229.1.mrna1.cds1;Name=FBgn0036229.1;Parent=FBgn0036229.1.mrna1;Target=FBgn0036229.1 1 16 +
Chr1	stalkie_big_nohaplotig	CDS	48136423	48139385	100	+	1	ID=FBgn0036229.1.mrna1.cds2;Name=FBgn0036229.1;Parent=FBgn0036229.1.mrna1;Target=FBgn0036229.1 17 2979 +
Chr2	stalkie_big_nohaplotig	mRNA	126881210	126909765	.	+	.	ID=FBgn0259215.mrna1;Name=FBgn0259215;Parent=FBgn0259215.path1;Dir=antisensecoverage=100.0;identity=100.0;matches=267;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	126881210	126881421	100	+	.	ID=FBgn0259215.mrna1.exon1;Name=FBgn0259215;Parent=FBgn0259215.mrna1;Target=FBgn0259215 56 267 -
Chr2	stalkie_big_nohaplotig	exon	126909711	126909765	100	+	.	ID=FBgn0259215.mrna1.exon2;Name=FBgn0259215;Parent=FBgn0259215.mrna1;Target=FBgn0259215 1 55 -
Chr2	stalkie_big_nohaplotig	CDS	126881211	126881288	100	+	0	ID=FBgn0259215.mrna1.cds1;Name=FBgn0259215;Parent=FBgn0259215.mrna1;Target=FBgn0259215 189 266 .
Chr2	stalkie_big_nohaplotig	mRNA	126863263	126869688	.	+	.	ID=FBgn0262736.1.mrna1;Name=FBgn0262736.1;Parent=FBgn0262736.1.path1;Dir=sensecoverage=99.2;identity=100.0;matches=488;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	126863263	126863355	100	+	.	ID=FBgn0262736.1.mrna1.exon1;Name=FBgn0262736.1;Parent=FBgn0262736.1.mrna1;Target=FBgn0262736.1 5 97 +
Chr2	stalkie_big_nohaplotig	exon	126869222	126869414	100	+	.	ID=FBgn0262736.1.mrna1.exon2;Name=FBgn0262736.1;Parent=FBgn0262736.1.mrna1;Target=FBgn0262736.1 98 290 +
Chr2	stalkie_big_nohaplotig	exon	126869487	126869688	100	+	.	ID=FBgn0262736.1.mrna1.exon3;Name=FBgn0262736.1;Parent=FBgn0262736.1.mrna1;Target=FBgn0262736.1 291 492 +
Chr2	stalkie_big_nohaplotig	CDS	126863265	126863355	100	+	0	ID=FBgn0262736.1.mrna1.cds1;Name=FBgn0262736.1;Parent=FBgn0262736.1.mrna1;Target=FBgn0262736.1 7 97 +
Chr2	stalkie_big_nohaplotig	CDS	126869222	126869414	100	+	1	ID=FBgn0262736.1.mrna1.cds2;Name=FBgn0262736.1;Parent=FBgn0262736.1.mrna1;Target=FBgn0262736.1 98 290 +
Chr2	stalkie_big_nohaplotig	CDS	126869487	126869688	100	+	2	ID=FBgn0262736.1.mrna1.cds3;Name=FBgn0262736.1;Parent=FBgn0262736.1.mrna1;Target=FBgn0262736.1 291 492 +
Chr2	stalkie_big_nohaplotig	mRNA	80068767	80072944	.	+	.	ID=FBgn0037875.1.mrna1;Name=FBgn0037875.1;Parent=FBgn0037875.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1017;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	80068767	80068974	100	+	.	ID=FBgn0037875.1.mrna1.exon1;Name=FBgn0037875.1;Parent=FBgn0037875.1.mrna1;Target=FBgn0037875.1 1 208 +
Chr2	stalkie_big_nohaplotig	exon	80072071	80072493	100	+	.	ID=FBgn0037875.1.mrna1.exon2;Name=FBgn0037875.1;Parent=FBgn0037875.1.mrna1;Target=FBgn0037875.1 209 631 +
Chr2	stalkie_big_nohaplotig	exon	80072559	80072944	100	+	.	ID=FBgn0037875.1.mrna1.exon3;Name=FBgn0037875.1;Parent=FBgn0037875.1.mrna1;Target=FBgn0037875.1 632 1017 +
Chr2	stalkie_big_nohaplotig	CDS	80068767	80068974	100	+	0	ID=FBgn0037875.1.mrna1.cds1;Name=FBgn0037875.1;Parent=FBgn0037875.1.mrna1;Target=FBgn0037875.1 1 208 +
Chr2	stalkie_big_nohaplotig	CDS	80072071	80072493	100	+	1	ID=FBgn0037875.1.mrna1.cds2;Name=FBgn0037875.1;Parent=FBgn0037875.1.mrna1;Target=FBgn0037875.1 209 631 +
Chr2	stalkie_big_nohaplotig	CDS	80072559	80072944	100	+	1	ID=FBgn0037875.1.mrna1.cds3;Name=FBgn0037875.1;Parent=FBgn0037875.1.mrna1;Target=FBgn0037875.1 632 1017 +
Chr1	stalkie_big_nohaplotig	mRNA	16138715	16195933	.	+	.	ID=FBgn0086913.1.mrna1;Name=FBgn0086913.1;Parent=FBgn0086913.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=819;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	16138715	16138945	100	+	.	ID=FBgn0086913.1.mrna1.exon1;Name=FBgn0086913.1;Parent=FBgn0086913.1.mrna1;Target=FBgn0086913.1 1 231 +
Chr1	stalkie_big_nohaplotig	exon	16139026	16139136	100	+	.	ID=FBgn0086913.1.mrna1.exon2;Name=FBgn0086913.1;Parent=FBgn0086913.1.mrna1;Target=FBgn0086913.1 232 342 +
Chr1	stalkie_big_nohaplotig	exon	16190340	16190448	100	+	.	ID=FBgn0086913.1.mrna1.exon3;Name=FBgn0086913.1;Parent=FBgn0086913.1.mrna1;Target=FBgn0086913.1 343 451 +
Chr1	stalkie_big_nohaplotig	exon	16194992	16195102	100	+	.	ID=FBgn0086913.1.mrna1.exon4;Name=FBgn0086913.1;Parent=FBgn0086913.1.mrna1;Target=FBgn0086913.1 452 562 +
Chr1	stalkie_big_nohaplotig	exon	16195503	16195647	100	+	.	ID=FBgn0086913.1.mrna1.exon5;Name=FBgn0086913.1;Parent=FBgn0086913.1.mrna1;Target=FBgn0086913.1 563 707 +
Chr1	stalkie_big_nohaplotig	exon	16195822	16195933	100	+	.	ID=FBgn0086913.1.mrna1.exon6;Name=FBgn0086913.1;Parent=FBgn0086913.1.mrna1;Target=FBgn0086913.1 708 819 +
Chr1	stalkie_big_nohaplotig	CDS	16138715	16138945	100	+	0	ID=FBgn0086913.1.mrna1.cds1;Name=FBgn0086913.1;Parent=FBgn0086913.1.mrna1;Target=FBgn0086913.1 1 231 +
Chr1	stalkie_big_nohaplotig	CDS	16139026	16139136	100	+	0	ID=FBgn0086913.1.mrna1.cds2;Name=FBgn0086913.1;Parent=FBgn0086913.1.mrna1;Target=FBgn0086913.1 232 342 +
Chr1	stalkie_big_nohaplotig	CDS	16190340	16190448	100	+	0	ID=FBgn0086913.1.mrna1.cds3;Name=FBgn0086913.1;Parent=FBgn0086913.1.mrna1;Target=FBgn0086913.1 343 451 +
Chr1	stalkie_big_nohaplotig	CDS	16194992	16195102	100	+	1	ID=FBgn0086913.1.mrna1.cds4;Name=FBgn0086913.1;Parent=FBgn0086913.1.mrna1;Target=FBgn0086913.1 452 562 +
Chr1	stalkie_big_nohaplotig	CDS	16195503	16195647	100	+	1	ID=FBgn0086913.1.mrna1.cds5;Name=FBgn0086913.1;Parent=FBgn0086913.1.mrna1;Target=FBgn0086913.1 563 707 +
Chr1	stalkie_big_nohaplotig	CDS	16195822	16195933	100	+	2	ID=FBgn0086913.1.mrna1.cds6;Name=FBgn0086913.1;Parent=FBgn0086913.1.mrna1;Target=FBgn0086913.1 708 819 +
Chr1	stalkie_big_nohaplotig	mRNA	30901539	30902422	.	+	.	ID=FBgn0035592.1.mrna1;Name=FBgn0035592.1;Parent=FBgn0035592.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=335;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	30901539	30901580	97	+	.	ID=FBgn0035592.1.mrna1.exon1;Name=FBgn0035592.1;Parent=FBgn0035592.1.mrna1;Target=FBgn0035592.1 1 42 +
Chr1	stalkie_big_nohaplotig	exon	30901701	30901785	100	+	.	ID=FBgn0035592.1.mrna1.exon2;Name=FBgn0035592.1;Parent=FBgn0035592.1.mrna1;Target=FBgn0035592.1 43 127 +
Chr1	stalkie_big_nohaplotig	exon	30902161	30902276	100	+	.	ID=FBgn0035592.1.mrna1.exon3;Name=FBgn0035592.1;Parent=FBgn0035592.1.mrna1;Target=FBgn0035592.1 128 243 +
Chr1	stalkie_big_nohaplotig	exon	30902330	30902422	100	+	.	ID=FBgn0035592.1.mrna1.exon4;Name=FBgn0035592.1;Parent=FBgn0035592.1.mrna1;Target=FBgn0035592.1 244 336 +
Chr1	stalkie_big_nohaplotig	CDS	30901539	30901580	97	+	0	ID=FBgn0035592.1.mrna1.cds1;Name=FBgn0035592.1;Parent=FBgn0035592.1.mrna1;Target=FBgn0035592.1 1 42 +
Chr1	stalkie_big_nohaplotig	CDS	30901701	30901785	100	+	0	ID=FBgn0035592.1.mrna1.cds2;Name=FBgn0035592.1;Parent=FBgn0035592.1.mrna1;Target=FBgn0035592.1 43 127 +
Chr1	stalkie_big_nohaplotig	CDS	30902161	30902276	100	+	1	ID=FBgn0035592.1.mrna1.cds3;Name=FBgn0035592.1;Parent=FBgn0035592.1.mrna1;Target=FBgn0035592.1 128 243 +
Chr1	stalkie_big_nohaplotig	CDS	30902330	30902422	100	+	0	ID=FBgn0035592.1.mrna1.cds4;Name=FBgn0035592.1;Parent=FBgn0035592.1.mrna1;Target=FBgn0035592.1 244 336 +
Chr1	stalkie_big_nohaplotig	mRNA	21186861	21188960	.	+	.	ID=FBgn0029173.4.mrna1;Name=FBgn0029173.4;Parent=FBgn0029173.4.path1;Dir=sensecoverage=100.0;identity=97.3;matches=1998;mismatches=41;indels=14;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	21186861	21187044	98	+	.	ID=FBgn0029173.4.mrna1.exon1;Name=FBgn0029173.4;Parent=FBgn0029173.4.mrna1;Target=FBgn0029173.4 1 184 +
Chr1	stalkie_big_nohaplotig	exon	21187099	21188960	97	+	.	ID=FBgn0029173.4.mrna1.exon2;Name=FBgn0029173.4;Parent=FBgn0029173.4.mrna1;Target=FBgn0029173.4 185 2046 +
Chr1	stalkie_big_nohaplotig	CDS	21186861	21187044	98	+	0	ID=FBgn0029173.4.mrna1.cds1;Name=FBgn0029173.4;Parent=FBgn0029173.4.mrna1;Target=FBgn0029173.4 1 184 +
Chr1	stalkie_big_nohaplotig	CDS	21187099	21188960	97	+	1	ID=FBgn0029173.4.mrna1.cds2;Name=FBgn0029173.4;Parent=FBgn0029173.4.mrna1;Target=FBgn0029173.4 185 2046 +
Chr2	stalkie_big_nohaplotig	mRNA	28423096	28424259	.	+	.	ID=ORF1470.mrna1;Name=ORF1470;Parent=ORF1470.path1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1081;mismatches=11;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	28423096	28424034	98	+	.	ID=ORF1470.mrna1.exon1;Name=ORF1470;Parent=ORF1470.mrna1;Target=ORF1470 939 1 .
Chr2	stalkie_big_nohaplotig	exon	28424107	28424259	99	+	.	ID=ORF1470.mrna1.exon2;Name=ORF1470;Parent=ORF1470.mrna1;Target=ORF1470 1092 940 .
Chr2	stalkie_big_nohaplotig	CDS	28423096	28424034	98	+	0	ID=ORF1470.mrna1.cds1;Name=ORF1470;Parent=ORF1470.mrna1;Target=ORF1470 939 1 .
Chr2	stalkie_big_nohaplotig	CDS	28424107	28424259	99	+	0	ID=ORF1470.mrna1.cds2;Name=ORF1470;Parent=ORF1470.mrna1;Target=ORF1470 1092 940 .
Chr1	stalkie_big_nohaplotig	mRNA	123286941	123288371	.	+	.	ID=ORF1900.mrna1;Name=ORF1900;Parent=ORF1900.path1;Dir=sensecoverage=99.7;identity=98.8;matches=951;mismatches=12;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	123286941	123286994	94	+	.	ID=ORF1900.mrna1.exon1;Name=ORF1900;Parent=ORF1900.mrna1;Target=ORF1900 4 57 +
Chr1	stalkie_big_nohaplotig	exon	123287463	123288371	99	+	.	ID=ORF1900.mrna1.exon2;Name=ORF1900;Parent=ORF1900.mrna1;Target=ORF1900 58 966 +
Chr1	stalkie_big_nohaplotig	CDS	123286941	123286994	94	+	0	ID=ORF1900.mrna1.cds1;Name=ORF1900;Parent=ORF1900.mrna1;Target=ORF1900 4 57 +
Chr1	stalkie_big_nohaplotig	CDS	123287463	123288371	99	+	0	ID=ORF1900.mrna1.cds2;Name=ORF1900;Parent=ORF1900.mrna1;Target=ORF1900 58 966 +
Chr2	stalkie_big_nohaplotig	mRNA	82528064	82560602	.	-	.	ID=FBgn0027539.1.mrna1;Name=FBgn0027539.1;Parent=FBgn0027539.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=1812;mismatches=12;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	82560398	82560602	99	-	.	ID=FBgn0027539.1.mrna1.exon1;Name=FBgn0027539.1;Parent=FBgn0027539.1.mrna1;Target=FBgn0027539.1 1 204 +
Chr2	stalkie_big_nohaplotig	exon	82535932	82536056	100	-	.	ID=FBgn0027539.1.mrna1.exon2;Name=FBgn0027539.1;Parent=FBgn0027539.1.mrna1;Target=FBgn0027539.1 205 329 +
Chr2	stalkie_big_nohaplotig	exon	82535724	82535863	97	-	.	ID=FBgn0027539.1.mrna1.exon3;Name=FBgn0027539.1;Parent=FBgn0027539.1.mrna1;Target=FBgn0027539.1 330 469 +
Chr2	stalkie_big_nohaplotig	exon	82535431	82535661	99	-	.	ID=FBgn0027539.1.mrna1.exon4;Name=FBgn0027539.1;Parent=FBgn0027539.1.mrna1;Target=FBgn0027539.1 470 700 +
Chr2	stalkie_big_nohaplotig	exon	82535174	82535242	100	-	.	ID=FBgn0027539.1.mrna1.exon5;Name=FBgn0027539.1;Parent=FBgn0027539.1.mrna1;Target=FBgn0027539.1 701 769 +
Chr2	stalkie_big_nohaplotig	exon	82528634	82529250	100	-	.	ID=FBgn0027539.1.mrna1.exon6;Name=FBgn0027539.1;Parent=FBgn0027539.1.mrna1;Target=FBgn0027539.1 770 1386 +
Chr2	stalkie_big_nohaplotig	exon	82528334	82528565	97	-	.	ID=FBgn0027539.1.mrna1.exon7;Name=FBgn0027539.1;Parent=FBgn0027539.1.mrna1;Target=FBgn0027539.1 1387 1618 +
Chr2	stalkie_big_nohaplotig	exon	82528064	82528269	100	-	.	ID=FBgn0027539.1.mrna1.exon8;Name=FBgn0027539.1;Parent=FBgn0027539.1.mrna1;Target=FBgn0027539.1 1619 1824 +
Chr2	stalkie_big_nohaplotig	CDS	82560556	82560601	97	-	0	ID=FBgn0027539.1.mrna1.cds1;Name=FBgn0027539.1;Parent=FBgn0027539.1.mrna1;Target=FBgn0027539.1 2 46 +
Chr2	stalkie_big_nohaplotig	mRNA	80458062	80464014	.	-	.	ID=FBgn0037979.1.mrna1;Name=FBgn0037979.1;Parent=FBgn0037979.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=4183;mismatches=17;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	80463976	80464014	100	-	.	ID=FBgn0037979.1.mrna1.exon1;Name=FBgn0037979.1;Parent=FBgn0037979.1.mrna1;Target=FBgn0037979.1 1 39 +
Chr2	stalkie_big_nohaplotig	exon	80463831	80463924	100	-	.	ID=FBgn0037979.1.mrna1.exon2;Name=FBgn0037979.1;Parent=FBgn0037979.1.mrna1;Target=FBgn0037979.1 40 133 +
Chr2	stalkie_big_nohaplotig	exon	80463140	80463435	100	-	.	ID=FBgn0037979.1.mrna1.exon3;Name=FBgn0037979.1;Parent=FBgn0037979.1.mrna1;Target=FBgn0037979.1 134 429 +
Chr2	stalkie_big_nohaplotig	exon	80459494	80463078	99	-	.	ID=FBgn0037979.1.mrna1.exon4;Name=FBgn0037979.1;Parent=FBgn0037979.1.mrna1;Target=FBgn0037979.1 430 4014 +
Chr2	stalkie_big_nohaplotig	exon	80458321	80458438	100	-	.	ID=FBgn0037979.1.mrna1.exon5;Name=FBgn0037979.1;Parent=FBgn0037979.1.mrna1;Target=FBgn0037979.1 4015 4132 +
Chr2	stalkie_big_nohaplotig	exon	80458062	80458129	100	-	.	ID=FBgn0037979.1.mrna1.exon6;Name=FBgn0037979.1;Parent=FBgn0037979.1.mrna1;Target=FBgn0037979.1 4133 4200 +
Chr2	stalkie_big_nohaplotig	CDS	80463976	80464014	100	-	0	ID=FBgn0037979.1.mrna1.cds1;Name=FBgn0037979.1;Parent=FBgn0037979.1.mrna1;Target=FBgn0037979.1 1 39 +
Chr2	stalkie_big_nohaplotig	CDS	80463831	80463924	100	-	0	ID=FBgn0037979.1.mrna1.cds2;Name=FBgn0037979.1;Parent=FBgn0037979.1.mrna1;Target=FBgn0037979.1 40 133 +
Chr2	stalkie_big_nohaplotig	CDS	80463140	80463435	100	-	1	ID=FBgn0037979.1.mrna1.cds3;Name=FBgn0037979.1;Parent=FBgn0037979.1.mrna1;Target=FBgn0037979.1 134 429 +
Chr2	stalkie_big_nohaplotig	CDS	80459494	80463078	99	-	0	ID=FBgn0037979.1.mrna1.cds4;Name=FBgn0037979.1;Parent=FBgn0037979.1.mrna1;Target=FBgn0037979.1 430 4014 +
Chr2	stalkie_big_nohaplotig	CDS	80458321	80458438	100	-	0	ID=FBgn0037979.1.mrna1.cds5;Name=FBgn0037979.1;Parent=FBgn0037979.1.mrna1;Target=FBgn0037979.1 4015 4132 +
Chr2	stalkie_big_nohaplotig	CDS	80458062	80458129	100	-	1	ID=FBgn0037979.1.mrna1.cds6;Name=FBgn0037979.1;Parent=FBgn0037979.1.mrna1;Target=FBgn0037979.1 4133 4200 +
Chr1	stalkie_big_nohaplotig	mRNA	118075154	118078303	.	+	.	ID=FBgn0029708.1.mrna1;Name=FBgn0029708.1;Parent=FBgn0029708.1.path1;Dir=sensecoverage=99.6;identity=99.2;matches=1601;mismatches=13;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	118075154	118076351	99	+	.	ID=FBgn0029708.1.mrna1.exon1;Name=FBgn0029708.1;Parent=FBgn0029708.1.mrna1;Target=FBgn0029708.1 7 1204 +
Chr1	stalkie_big_nohaplotig	exon	118076461	118076656	98	+	.	ID=FBgn0029708.1.mrna1.exon2;Name=FBgn0029708.1;Parent=FBgn0029708.1.mrna1;Target=FBgn0029708.1 1205 1400 +
Chr1	stalkie_big_nohaplotig	exon	118077771	118077848	98	+	.	ID=FBgn0029708.1.mrna1.exon3;Name=FBgn0029708.1;Parent=FBgn0029708.1.mrna1;Target=FBgn0029708.1 1401 1478 +
Chr1	stalkie_big_nohaplotig	exon	118078089	118078171	98	+	.	ID=FBgn0029708.1.mrna1.exon4;Name=FBgn0029708.1;Parent=FBgn0029708.1.mrna1;Target=FBgn0029708.1 1479 1561 +
Chr1	stalkie_big_nohaplotig	exon	118078245	118078303	100	+	.	ID=FBgn0029708.1.mrna1.exon5;Name=FBgn0029708.1;Parent=FBgn0029708.1.mrna1;Target=FBgn0029708.1 1562 1620 +
Chr1	stalkie_big_nohaplotig	CDS	118075154	118076351	99	+	0	ID=FBgn0029708.1.mrna1.cds1;Name=FBgn0029708.1;Parent=FBgn0029708.1.mrna1;Target=FBgn0029708.1 7 1204 +
Chr1	stalkie_big_nohaplotig	CDS	118076461	118076656	98	+	1	ID=FBgn0029708.1.mrna1.cds2;Name=FBgn0029708.1;Parent=FBgn0029708.1.mrna1;Target=FBgn0029708.1 1205 1400 +
Chr1	stalkie_big_nohaplotig	CDS	118077771	118077848	98	+	2	ID=FBgn0029708.1.mrna1.cds3;Name=FBgn0029708.1;Parent=FBgn0029708.1.mrna1;Target=FBgn0029708.1 1401 1478 +
Chr1	stalkie_big_nohaplotig	CDS	118078089	118078171	98	+	2	ID=FBgn0029708.1.mrna1.cds4;Name=FBgn0029708.1;Parent=FBgn0029708.1.mrna1;Target=FBgn0029708.1 1479 1561 +
Chr1	stalkie_big_nohaplotig	CDS	118078245	118078303	100	+	1	ID=FBgn0029708.1.mrna1.cds5;Name=FBgn0029708.1;Parent=FBgn0029708.1.mrna1;Target=FBgn0029708.1 1562 1620 +
Chr1	stalkie_big_nohaplotig	mRNA	156801695	156834403	.	+	.	ID=FBgn0028421.1.mrna1;Name=FBgn0028421.1;Parent=FBgn0028421.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3066;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	156801695	156802023	100	+	.	ID=FBgn0028421.1.mrna1.exon1;Name=FBgn0028421.1;Parent=FBgn0028421.1.mrna1;Target=FBgn0028421.1 1 329 +
Chr1	stalkie_big_nohaplotig	exon	156802535	156802655	100	+	.	ID=FBgn0028421.1.mrna1.exon2;Name=FBgn0028421.1;Parent=FBgn0028421.1.mrna1;Target=FBgn0028421.1 330 450 +
Chr1	stalkie_big_nohaplotig	exon	156830822	156830987	100	+	.	ID=FBgn0028421.1.mrna1.exon3;Name=FBgn0028421.1;Parent=FBgn0028421.1.mrna1;Target=FBgn0028421.1 451 616 +
Chr1	stalkie_big_nohaplotig	exon	156831148	156831387	100	+	.	ID=FBgn0028421.1.mrna1.exon4;Name=FBgn0028421.1;Parent=FBgn0028421.1.mrna1;Target=FBgn0028421.1 617 856 +
Chr1	stalkie_big_nohaplotig	exon	156831446	156831582	100	+	.	ID=FBgn0028421.1.mrna1.exon5;Name=FBgn0028421.1;Parent=FBgn0028421.1.mrna1;Target=FBgn0028421.1 857 993 +
Chr1	stalkie_big_nohaplotig	exon	156831642	156831827	100	+	.	ID=FBgn0028421.1.mrna1.exon6;Name=FBgn0028421.1;Parent=FBgn0028421.1.mrna1;Target=FBgn0028421.1 994 1179 +
Chr1	stalkie_big_nohaplotig	exon	156832310	156833017	100	+	.	ID=FBgn0028421.1.mrna1.exon7;Name=FBgn0028421.1;Parent=FBgn0028421.1.mrna1;Target=FBgn0028421.1 1180 1887 +
Chr1	stalkie_big_nohaplotig	exon	156833081	156833848	100	+	.	ID=FBgn0028421.1.mrna1.exon8;Name=FBgn0028421.1;Parent=FBgn0028421.1.mrna1;Target=FBgn0028421.1 1888 2655 +
Chr1	stalkie_big_nohaplotig	exon	156833918	156834168	100	+	.	ID=FBgn0028421.1.mrna1.exon9;Name=FBgn0028421.1;Parent=FBgn0028421.1.mrna1;Target=FBgn0028421.1 2656 2906 +
Chr1	stalkie_big_nohaplotig	exon	156834244	156834403	100	+	.	ID=FBgn0028421.1.mrna1.exon10;Name=FBgn0028421.1;Parent=FBgn0028421.1.mrna1;Target=FBgn0028421.1 2907 3066 +
Chr1	stalkie_big_nohaplotig	CDS	156801695	156802023	100	+	0	ID=FBgn0028421.1.mrna1.cds1;Name=FBgn0028421.1;Parent=FBgn0028421.1.mrna1;Target=FBgn0028421.1 1 329 +
Chr1	stalkie_big_nohaplotig	CDS	156802535	156802655	100	+	2	ID=FBgn0028421.1.mrna1.cds2;Name=FBgn0028421.1;Parent=FBgn0028421.1.mrna1;Target=FBgn0028421.1 330 450 +
Chr1	stalkie_big_nohaplotig	CDS	156830822	156830987	100	+	0	ID=FBgn0028421.1.mrna1.cds3;Name=FBgn0028421.1;Parent=FBgn0028421.1.mrna1;Target=FBgn0028421.1 451 616 +
Chr1	stalkie_big_nohaplotig	CDS	156831148	156831387	100	+	1	ID=FBgn0028421.1.mrna1.cds4;Name=FBgn0028421.1;Parent=FBgn0028421.1.mrna1;Target=FBgn0028421.1 617 856 +
Chr1	stalkie_big_nohaplotig	CDS	156831446	156831582	100	+	1	ID=FBgn0028421.1.mrna1.cds5;Name=FBgn0028421.1;Parent=FBgn0028421.1.mrna1;Target=FBgn0028421.1 857 993 +
Chr1	stalkie_big_nohaplotig	CDS	156831642	156831827	100	+	0	ID=FBgn0028421.1.mrna1.cds6;Name=FBgn0028421.1;Parent=FBgn0028421.1.mrna1;Target=FBgn0028421.1 994 1179 +
Chr1	stalkie_big_nohaplotig	CDS	156832310	156833017	100	+	0	ID=FBgn0028421.1.mrna1.cds7;Name=FBgn0028421.1;Parent=FBgn0028421.1.mrna1;Target=FBgn0028421.1 1180 1887 +
Chr1	stalkie_big_nohaplotig	CDS	156833081	156833848	100	+	0	ID=FBgn0028421.1.mrna1.cds8;Name=FBgn0028421.1;Parent=FBgn0028421.1.mrna1;Target=FBgn0028421.1 1888 2655 +
Chr1	stalkie_big_nohaplotig	CDS	156833918	156834168	100	+	0	ID=FBgn0028421.1.mrna1.cds9;Name=FBgn0028421.1;Parent=FBgn0028421.1.mrna1;Target=FBgn0028421.1 2656 2906 +
Chr1	stalkie_big_nohaplotig	CDS	156834244	156834403	100	+	2	ID=FBgn0028421.1.mrna1.cds10;Name=FBgn0028421.1;Parent=FBgn0028421.1.mrna1;Target=FBgn0028421.1 2907 3066 +
Chr1	stalkie_big_nohaplotig	mRNA	156904691	156905275	.	-	.	ID=FBgn0051111.2.mrna1;Name=FBgn0051111.2;Parent=FBgn0051111.2.path1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=579;mismatches=6;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	156904691	156905275	98	-	.	ID=FBgn0051111.2.mrna1.exon1;Name=FBgn0051111.2;Parent=FBgn0051111.2.mrna1;Target=FBgn0051111.2 585 1 .
Chr1	stalkie_big_nohaplotig	CDS	156904691	156905275	98	-	0	ID=FBgn0051111.2.mrna1.cds1;Name=FBgn0051111.2;Parent=FBgn0051111.2.mrna1;Target=FBgn0051111.2 585 1 .
Chr1	stalkie_big_nohaplotig	mRNA	38699256	38726170	.	+	.	ID=FBgn0015904.1.mrna1;Name=FBgn0015904.1;Parent=FBgn0015904.1.path1;Dir=sensecoverage=100.0;identity=99.4;matches=1438;mismatches=8;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	38699256	38699321	100	+	.	ID=FBgn0015904.1.mrna1.exon1;Name=FBgn0015904.1;Parent=FBgn0015904.1.mrna1;Target=FBgn0015904.1 1 66 +
Chr1	stalkie_big_nohaplotig	exon	38716905	38717441	99	+	.	ID=FBgn0015904.1.mrna1.exon2;Name=FBgn0015904.1;Parent=FBgn0015904.1.mrna1;Target=FBgn0015904.1 67 603 +
Chr1	stalkie_big_nohaplotig	exon	38720895	38721013	100	+	.	ID=FBgn0015904.1.mrna1.exon3;Name=FBgn0015904.1;Parent=FBgn0015904.1.mrna1;Target=FBgn0015904.1 604 722 +
Chr1	stalkie_big_nohaplotig	exon	38724346	38724689	98	+	.	ID=FBgn0015904.1.mrna1.exon4;Name=FBgn0015904.1;Parent=FBgn0015904.1.mrna1;Target=FBgn0015904.1 723 1066 +
Chr1	stalkie_big_nohaplotig	exon	38725791	38726170	100	+	.	ID=FBgn0015904.1.mrna1.exon5;Name=FBgn0015904.1;Parent=FBgn0015904.1.mrna1;Target=FBgn0015904.1 1067 1446 +
Chr1	stalkie_big_nohaplotig	CDS	38699256	38699321	100	+	0	ID=FBgn0015904.1.mrna1.cds1;Name=FBgn0015904.1;Parent=FBgn0015904.1.mrna1;Target=FBgn0015904.1 1 66 +
Chr1	stalkie_big_nohaplotig	CDS	38716905	38717441	99	+	0	ID=FBgn0015904.1.mrna1.cds2;Name=FBgn0015904.1;Parent=FBgn0015904.1.mrna1;Target=FBgn0015904.1 67 603 +
Chr1	stalkie_big_nohaplotig	CDS	38720895	38721013	100	+	0	ID=FBgn0015904.1.mrna1.cds3;Name=FBgn0015904.1;Parent=FBgn0015904.1.mrna1;Target=FBgn0015904.1 604 722 +
Chr1	stalkie_big_nohaplotig	CDS	38724346	38724689	98	+	2	ID=FBgn0015904.1.mrna1.cds4;Name=FBgn0015904.1;Parent=FBgn0015904.1.mrna1;Target=FBgn0015904.1 723 1066 +
Chr1	stalkie_big_nohaplotig	CDS	38725791	38726170	100	+	1	ID=FBgn0015904.1.mrna1.cds5;Name=FBgn0015904.1;Parent=FBgn0015904.1.mrna1;Target=FBgn0015904.1 1067 1446 +
Chr1	stalkie_big_nohaplotig	mRNA	20455567	20456736	.	-	.	ID=ORF1369.mrna1;Name=ORF1369;Parent=ORF1369.path1;Dir=indeterminatecoverage=100.0;identity=95.1;matches=1113;mismatches=12;indels=45;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	20455567	20456736	95	-	.	ID=ORF1369.mrna1.exon1;Name=ORF1369;Parent=ORF1369.mrna1;Target=ORF1369 1125 1 .
Chr1	stalkie_big_nohaplotig	CDS	20455567	20456736	95	-	0	ID=ORF1369.mrna1.cds1;Name=ORF1369;Parent=ORF1369.mrna1;Target=ORF1369 1125 1 .
ChrX	stalkie_big_nohaplotig	mRNA	81545785	81550101	.	+	.	ID=FBgn0259927.1.mrna1;Name=FBgn0259927.1;Parent=FBgn0259927.1.path1;Dir=sensecoverage=34.6;identity=100.0;matches=1758;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	81545785	81546094	100	+	.	ID=FBgn0259927.1.mrna1.exon1;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna1;Target=FBgn0259927.1 1 310 +
ChrX	stalkie_big_nohaplotig	exon	81546185	81546234	100	+	.	ID=FBgn0259927.1.mrna1.exon2;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna1;Target=FBgn0259927.1 311 360 +
ChrX	stalkie_big_nohaplotig	exon	81546303	81546372	100	+	.	ID=FBgn0259927.1.mrna1.exon3;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna1;Target=FBgn0259927.1 361 430 +
ChrX	stalkie_big_nohaplotig	exon	81547092	81547171	100	+	.	ID=FBgn0259927.1.mrna1.exon4;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna1;Target=FBgn0259927.1 431 510 +
ChrX	stalkie_big_nohaplotig	exon	81547245	81547571	100	+	.	ID=FBgn0259927.1.mrna1.exon5;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna1;Target=FBgn0259927.1 511 837 +
ChrX	stalkie_big_nohaplotig	exon	81547675	81547800	100	+	.	ID=FBgn0259927.1.mrna1.exon6;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna1;Target=FBgn0259927.1 838 963 +
ChrX	stalkie_big_nohaplotig	exon	81547865	81547975	100	+	.	ID=FBgn0259927.1.mrna1.exon7;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna1;Target=FBgn0259927.1 964 1074 +
ChrX	stalkie_big_nohaplotig	exon	81548055	81548162	100	+	.	ID=FBgn0259927.1.mrna1.exon8;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna1;Target=FBgn0259927.1 1075 1182 +
ChrX	stalkie_big_nohaplotig	exon	81549460	81549622	100	+	.	ID=FBgn0259927.1.mrna1.exon9;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna1;Target=FBgn0259927.1 1183 1345 +
ChrX	stalkie_big_nohaplotig	exon	81549689	81550101	100	+	.	ID=FBgn0259927.1.mrna1.exon10;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna1;Target=FBgn0259927.1 1346 1758 +
ChrX	stalkie_big_nohaplotig	CDS	81545785	81546094	100	+	0	ID=FBgn0259927.1.mrna1.cds1;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna1;Target=FBgn0259927.1 1 310 +
ChrX	stalkie_big_nohaplotig	CDS	81546185	81546234	100	+	1	ID=FBgn0259927.1.mrna1.cds2;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna1;Target=FBgn0259927.1 311 360 +
ChrX	stalkie_big_nohaplotig	CDS	81546303	81546372	100	+	0	ID=FBgn0259927.1.mrna1.cds3;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna1;Target=FBgn0259927.1 361 430 +
ChrX	stalkie_big_nohaplotig	CDS	81547092	81547171	100	+	1	ID=FBgn0259927.1.mrna1.cds4;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna1;Target=FBgn0259927.1 431 510 +
ChrX	stalkie_big_nohaplotig	CDS	81547245	81547571	100	+	0	ID=FBgn0259927.1.mrna1.cds5;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna1;Target=FBgn0259927.1 511 837 +
ChrX	stalkie_big_nohaplotig	CDS	81547675	81547800	100	+	0	ID=FBgn0259927.1.mrna1.cds6;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna1;Target=FBgn0259927.1 838 963 +
ChrX	stalkie_big_nohaplotig	CDS	81547865	81547975	100	+	0	ID=FBgn0259927.1.mrna1.cds7;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna1;Target=FBgn0259927.1 964 1074 +
ChrX	stalkie_big_nohaplotig	CDS	81548055	81548162	100	+	0	ID=FBgn0259927.1.mrna1.cds8;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna1;Target=FBgn0259927.1 1075 1182 +
ChrX	stalkie_big_nohaplotig	CDS	81549460	81549622	100	+	0	ID=FBgn0259927.1.mrna1.cds9;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna1;Target=FBgn0259927.1 1183 1345 +
ChrX	stalkie_big_nohaplotig	CDS	81549689	81550101	100	+	1	ID=FBgn0259927.1.mrna1.cds10;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna1;Target=FBgn0259927.1 1346 1758 +
Chr1	stalkie_big_nohaplotig	mRNA	156591828	156601419	.	-	.	ID=FBgn0259927.1.mrna2;Name=FBgn0259927.1;Parent=FBgn0259927.1.path2;Dir=sensecoverage=65.3;identity=99.6;matches=3306;mismatches=12;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	156601030	156601419	99	-	.	ID=FBgn0259927.1.mrna2.exon1;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna2;Target=FBgn0259927.1 1759 2148 +
Chr1	stalkie_big_nohaplotig	exon	156597528	156597624	100	-	.	ID=FBgn0259927.1.mrna2.exon2;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna2;Target=FBgn0259927.1 2149 2245 +
Chr1	stalkie_big_nohaplotig	exon	156597065	156597465	99	-	.	ID=FBgn0259927.1.mrna2.exon3;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna2;Target=FBgn0259927.1 2246 2646 +
Chr1	stalkie_big_nohaplotig	exon	156596487	156596998	99	-	.	ID=FBgn0259927.1.mrna2.exon4;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna2;Target=FBgn0259927.1 2647 3158 +
Chr1	stalkie_big_nohaplotig	exon	156595726	156596217	100	-	.	ID=FBgn0259927.1.mrna2.exon5;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna2;Target=FBgn0259927.1 3159 3650 +
Chr1	stalkie_big_nohaplotig	exon	156594406	156594609	99	-	.	ID=FBgn0259927.1.mrna2.exon6;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna2;Target=FBgn0259927.1 3651 3854 +
Chr1	stalkie_big_nohaplotig	exon	156592962	156593114	100	-	.	ID=FBgn0259927.1.mrna2.exon7;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna2;Target=FBgn0259927.1 3855 4007 +
Chr1	stalkie_big_nohaplotig	exon	156591828	156592896	99	-	.	ID=FBgn0259927.1.mrna2.exon8;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna2;Target=FBgn0259927.1 4008 5076 +
Chr1	stalkie_big_nohaplotig	CDS	156601030	156601419	99	-	0	ID=FBgn0259927.1.mrna2.cds1;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna2;Target=FBgn0259927.1 1759 2148 +
Chr1	stalkie_big_nohaplotig	CDS	156597528	156597624	100	-	0	ID=FBgn0259927.1.mrna2.cds2;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna2;Target=FBgn0259927.1 2149 2245 +
Chr1	stalkie_big_nohaplotig	CDS	156597065	156597465	99	-	1	ID=FBgn0259927.1.mrna2.cds3;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna2;Target=FBgn0259927.1 2246 2646 +
Chr1	stalkie_big_nohaplotig	CDS	156596487	156596998	99	-	0	ID=FBgn0259927.1.mrna2.cds4;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna2;Target=FBgn0259927.1 2647 3158 +
Chr1	stalkie_big_nohaplotig	CDS	156595726	156596217	100	-	2	ID=FBgn0259927.1.mrna2.cds5;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna2;Target=FBgn0259927.1 3159 3650 +
Chr1	stalkie_big_nohaplotig	CDS	156594406	156594609	99	-	2	ID=FBgn0259927.1.mrna2.cds6;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna2;Target=FBgn0259927.1 3651 3854 +
Chr1	stalkie_big_nohaplotig	CDS	156592962	156593114	100	-	2	ID=FBgn0259927.1.mrna2.cds7;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna2;Target=FBgn0259927.1 3855 4007 +
Chr1	stalkie_big_nohaplotig	CDS	156591828	156592896	99	-	2	ID=FBgn0259927.1.mrna2.cds8;Name=FBgn0259927.1;Parent=FBgn0259927.1.mrna2;Target=FBgn0259927.1 4008 5076 +
ChrX	stalkie_big_nohaplotig	mRNA	18495100	18498818	.	-	.	ID=FBgn0031304.1.mrna1;Name=FBgn0031304.1;Parent=FBgn0031304.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2175;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	18498748	18498818	100	-	.	ID=FBgn0031304.1.mrna1.exon1;Name=FBgn0031304.1;Parent=FBgn0031304.1.mrna1;Target=FBgn0031304.1 1 71 +
ChrX	stalkie_big_nohaplotig	exon	18497468	18498359	100	-	.	ID=FBgn0031304.1.mrna1.exon2;Name=FBgn0031304.1;Parent=FBgn0031304.1.mrna1;Target=FBgn0031304.1 72 963 +
ChrX	stalkie_big_nohaplotig	exon	18496889	18497404	100	-	.	ID=FBgn0031304.1.mrna1.exon3;Name=FBgn0031304.1;Parent=FBgn0031304.1.mrna1;Target=FBgn0031304.1 964 1479 +
ChrX	stalkie_big_nohaplotig	exon	18495100	18495795	100	-	.	ID=FBgn0031304.1.mrna1.exon4;Name=FBgn0031304.1;Parent=FBgn0031304.1.mrna1;Target=FBgn0031304.1 1480 2175 +
ChrX	stalkie_big_nohaplotig	CDS	18498748	18498818	100	-	0	ID=FBgn0031304.1.mrna1.cds1;Name=FBgn0031304.1;Parent=FBgn0031304.1.mrna1;Target=FBgn0031304.1 1 71 +
ChrX	stalkie_big_nohaplotig	CDS	18497468	18498359	100	-	2	ID=FBgn0031304.1.mrna1.cds2;Name=FBgn0031304.1;Parent=FBgn0031304.1.mrna1;Target=FBgn0031304.1 72 963 +
ChrX	stalkie_big_nohaplotig	CDS	18496889	18497404	100	-	0	ID=FBgn0031304.1.mrna1.cds3;Name=FBgn0031304.1;Parent=FBgn0031304.1.mrna1;Target=FBgn0031304.1 964 1479 +
ChrX	stalkie_big_nohaplotig	CDS	18495100	18495795	100	-	0	ID=FBgn0031304.1.mrna1.cds4;Name=FBgn0031304.1;Parent=FBgn0031304.1.mrna1;Target=FBgn0031304.1 1480 2175 +
Chr2	stalkie_big_nohaplotig	mRNA	127354754	127355743	.	+	.	ID=FBgn0040066.2.mrna1;Name=FBgn0040066.2;Parent=FBgn0040066.2.path1;Dir=sensecoverage=100.0;identity=99.5;matches=848;mismatches=4;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	127354754	127354784	100	+	.	ID=FBgn0040066.2.mrna1.exon1;Name=FBgn0040066.2;Parent=FBgn0040066.2.mrna1;Target=FBgn0040066.2 1 31 +
Chr2	stalkie_big_nohaplotig	exon	127354845	127355479	99	+	.	ID=FBgn0040066.2.mrna1.exon2;Name=FBgn0040066.2;Parent=FBgn0040066.2.mrna1;Target=FBgn0040066.2 32 666 +
Chr2	stalkie_big_nohaplotig	exon	127355558	127355743	100	+	.	ID=FBgn0040066.2.mrna1.exon3;Name=FBgn0040066.2;Parent=FBgn0040066.2.mrna1;Target=FBgn0040066.2 667 852 +
Chr2	stalkie_big_nohaplotig	CDS	127354754	127354784	100	+	0	ID=FBgn0040066.2.mrna1.cds1;Name=FBgn0040066.2;Parent=FBgn0040066.2.mrna1;Target=FBgn0040066.2 1 31 +
Chr2	stalkie_big_nohaplotig	CDS	127354845	127355479	99	+	1	ID=FBgn0040066.2.mrna1.cds2;Name=FBgn0040066.2;Parent=FBgn0040066.2.mrna1;Target=FBgn0040066.2 32 666 +
Chr2	stalkie_big_nohaplotig	CDS	127355558	127355743	100	+	0	ID=FBgn0040066.2.mrna1.cds3;Name=FBgn0040066.2;Parent=FBgn0040066.2.mrna1;Target=FBgn0040066.2 667 852 +
Chr1	stalkie_big_nohaplotig	mRNA	143953662	143955375	.	+	.	ID=FBgn0010356.3.mrna1;Name=FBgn0010356.3;Parent=FBgn0010356.3.path1;Dir=sensecoverage=100.0;identity=99.4;matches=1425;mismatches=9;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	143953662	143953814	98	+	.	ID=FBgn0010356.3.mrna1.exon1;Name=FBgn0010356.3;Parent=FBgn0010356.3.mrna1;Target=FBgn0010356.3 1 153 +
Chr1	stalkie_big_nohaplotig	exon	143954095	143955375	99	+	.	ID=FBgn0010356.3.mrna1.exon2;Name=FBgn0010356.3;Parent=FBgn0010356.3.mrna1;Target=FBgn0010356.3 154 1434 +
Chr1	stalkie_big_nohaplotig	CDS	143953662	143953814	98	+	0	ID=FBgn0010356.3.mrna1.cds1;Name=FBgn0010356.3;Parent=FBgn0010356.3.mrna1;Target=FBgn0010356.3 1 153 +
Chr1	stalkie_big_nohaplotig	CDS	143954095	143955375	99	+	0	ID=FBgn0010356.3.mrna1.cds2;Name=FBgn0010356.3;Parent=FBgn0010356.3.mrna1;Target=FBgn0010356.3 154 1434 +
Chr2	stalkie_big_nohaplotig	mRNA	23137666	23140599	.	-	.	ID=ORF951.mrna1;Name=ORF951;Parent=ORF951.path1;Dir=sensecoverage=100.0;identity=98.7;matches=1312;mismatches=17;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	23139649	23140599	98	-	.	ID=ORF951.mrna1.exon1;Name=ORF951;Parent=ORF951.mrna1;Target=ORF951 1 951 +
Chr2	stalkie_big_nohaplotig	exon	23137666	23138043	98	-	.	ID=ORF951.mrna1.exon2;Name=ORF951;Parent=ORF951.mrna1;Target=ORF951 952 1329 +
Chr2	stalkie_big_nohaplotig	CDS	23139649	23140599	98	-	0	ID=ORF951.mrna1.cds1;Name=ORF951;Parent=ORF951.mrna1;Target=ORF951 1 951 +
Chr2	stalkie_big_nohaplotig	CDS	23137666	23138043	98	-	0	ID=ORF951.mrna1.cds2;Name=ORF951;Parent=ORF951.mrna1;Target=ORF951 952 1329 +
Chr2	stalkie_big_nohaplotig	mRNA	23784194	23787126	.	+	.	ID=ORF951.mrna2;Name=ORF951;Parent=ORF951.path2;Dir=sensecoverage=99.9;identity=98.6;matches=1310;mismatches=18;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	23784194	23785143	98	+	.	ID=ORF951.mrna2.exon1;Name=ORF951;Parent=ORF951.mrna2;Target=ORF951 2 951 +
Chr2	stalkie_big_nohaplotig	exon	23786749	23787126	98	+	.	ID=ORF951.mrna2.exon2;Name=ORF951;Parent=ORF951.mrna2;Target=ORF951 952 1329 +
Chr2	stalkie_big_nohaplotig	CDS	23784196	23785143	98	+	0	ID=ORF951.mrna2.cds1;Name=ORF951;Parent=ORF951.mrna2;Target=ORF951 4 951 +
Chr2	stalkie_big_nohaplotig	CDS	23786749	23787126	98	+	0	ID=ORF951.mrna2.cds2;Name=ORF951;Parent=ORF951.mrna2;Target=ORF951 952 1329 +
Chr1	stalkie_big_nohaplotig	mRNA	25935456	25957082	.	-	.	ID=FBgn0035574.1.mrna1;Name=FBgn0035574.1;Parent=FBgn0035574.1.path1;Dir=sensecoverage=94.8;identity=99.6;matches=4546;mismatches=17;indels=3;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	25957075	25957082	100	-	.	ID=FBgn0035574.1.mrna1.exon1;Name=FBgn0035574.1;Parent=FBgn0035574.1.mrna1;Target=FBgn0035574.1 250 257 +
Chr1	stalkie_big_nohaplotig	exon	25951313	25951319	100	-	.	ID=FBgn0035574.1.mrna1.exon2;Name=FBgn0035574.1;Parent=FBgn0035574.1.mrna1;Target=FBgn0035574.1 258 264 +
Chr1	stalkie_big_nohaplotig	exon	25947285	25947301	70	-	.	ID=FBgn0035574.1.mrna1.exon3;Name=FBgn0035574.1;Parent=FBgn0035574.1.mrna1;Target=FBgn0035574.1 265 281 +
Chr1	stalkie_big_nohaplotig	exon	25946643	25946660	83	-	.	ID=FBgn0035574.1.mrna1.exon4;Name=FBgn0035574.1;Parent=FBgn0035574.1.mrna1;Target=FBgn0035574.1 282 299 +
Chr1	stalkie_big_nohaplotig	exon	25942509	25946268	99	-	.	ID=FBgn0035574.1.mrna1.exon5;Name=FBgn0035574.1;Parent=FBgn0035574.1.mrna1;Target=FBgn0035574.1 300 4062 +
Chr1	stalkie_big_nohaplotig	exon	25940248	25940643	100	-	.	ID=FBgn0035574.1.mrna1.exon6;Name=FBgn0035574.1;Parent=FBgn0035574.1.mrna1;Target=FBgn0035574.1 4063 4458 +
Chr1	stalkie_big_nohaplotig	exon	25939112	25939339	100	-	.	ID=FBgn0035574.1.mrna1.exon7;Name=FBgn0035574.1;Parent=FBgn0035574.1.mrna1;Target=FBgn0035574.1 4459 4686 +
Chr1	stalkie_big_nohaplotig	exon	25935456	25935584	100	-	.	ID=FBgn0035574.1.mrna1.exon8;Name=FBgn0035574.1;Parent=FBgn0035574.1.mrna1;Target=FBgn0035574.1 4687 4815 +
Chr1	stalkie_big_nohaplotig	CDS	25942509	25946135	99	-	0	ID=FBgn0035574.1.mrna1.cds1;Name=FBgn0035574.1;Parent=FBgn0035574.1.mrna1;Target=FBgn0035574.1 433 4062 +
Chr1	stalkie_big_nohaplotig	CDS	25940248	25940643	100	-	0	ID=FBgn0035574.1.mrna1.cds2;Name=FBgn0035574.1;Parent=FBgn0035574.1.mrna1;Target=FBgn0035574.1 4063 4458 +
Chr1	stalkie_big_nohaplotig	CDS	25939112	25939339	100	-	0	ID=FBgn0035574.1.mrna1.cds3;Name=FBgn0035574.1;Parent=FBgn0035574.1.mrna1;Target=FBgn0035574.1 4459 4686 +
Chr1	stalkie_big_nohaplotig	CDS	25935456	25935584	100	-	0	ID=FBgn0035574.1.mrna1.cds4;Name=FBgn0035574.1;Parent=FBgn0035574.1.mrna1;Target=FBgn0035574.1 4687 4815 +
ChrX	stalkie_big_nohaplotig	mRNA	56647743	56654588	.	+	.	ID=FBgn0019890.1.mrna1;Name=FBgn0019890.1;Parent=FBgn0019890.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=3442;mismatches=8;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	56647743	56647807	100	+	.	ID=FBgn0019890.1.mrna1.exon1;Name=FBgn0019890.1;Parent=FBgn0019890.1.mrna1;Target=FBgn0019890.1 1 65 +
ChrX	stalkie_big_nohaplotig	exon	56648625	56648756	100	+	.	ID=FBgn0019890.1.mrna1.exon2;Name=FBgn0019890.1;Parent=FBgn0019890.1.mrna1;Target=FBgn0019890.1 66 197 +
ChrX	stalkie_big_nohaplotig	exon	56649293	56650914	99	+	.	ID=FBgn0019890.1.mrna1.exon3;Name=FBgn0019890.1;Parent=FBgn0019890.1.mrna1;Target=FBgn0019890.1 198 1819 +
ChrX	stalkie_big_nohaplotig	exon	56650984	56652086	99	+	.	ID=FBgn0019890.1.mrna1.exon4;Name=FBgn0019890.1;Parent=FBgn0019890.1.mrna1;Target=FBgn0019890.1 1820 2922 +
ChrX	stalkie_big_nohaplotig	exon	56652152	56652281	100	+	.	ID=FBgn0019890.1.mrna1.exon5;Name=FBgn0019890.1;Parent=FBgn0019890.1.mrna1;Target=FBgn0019890.1 2923 3052 +
ChrX	stalkie_big_nohaplotig	exon	56653421	56653579	100	+	.	ID=FBgn0019890.1.mrna1.exon6;Name=FBgn0019890.1;Parent=FBgn0019890.1.mrna1;Target=FBgn0019890.1 3053 3211 +
ChrX	stalkie_big_nohaplotig	exon	56654350	56654588	100	+	.	ID=FBgn0019890.1.mrna1.exon7;Name=FBgn0019890.1;Parent=FBgn0019890.1.mrna1;Target=FBgn0019890.1 3212 3450 +
ChrX	stalkie_big_nohaplotig	CDS	56647743	56647807	100	+	0	ID=FBgn0019890.1.mrna1.cds1;Name=FBgn0019890.1;Parent=FBgn0019890.1.mrna1;Target=FBgn0019890.1 1 65 +
ChrX	stalkie_big_nohaplotig	CDS	56648625	56648756	100	+	2	ID=FBgn0019890.1.mrna1.cds2;Name=FBgn0019890.1;Parent=FBgn0019890.1.mrna1;Target=FBgn0019890.1 66 197 +
ChrX	stalkie_big_nohaplotig	CDS	56649293	56650914	99	+	2	ID=FBgn0019890.1.mrna1.cds3;Name=FBgn0019890.1;Parent=FBgn0019890.1.mrna1;Target=FBgn0019890.1 198 1819 +
ChrX	stalkie_big_nohaplotig	CDS	56650984	56652086	99	+	1	ID=FBgn0019890.1.mrna1.cds4;Name=FBgn0019890.1;Parent=FBgn0019890.1.mrna1;Target=FBgn0019890.1 1820 2922 +
ChrX	stalkie_big_nohaplotig	CDS	56652152	56652281	100	+	0	ID=FBgn0019890.1.mrna1.cds5;Name=FBgn0019890.1;Parent=FBgn0019890.1.mrna1;Target=FBgn0019890.1 2923 3052 +
ChrX	stalkie_big_nohaplotig	CDS	56653421	56653579	100	+	1	ID=FBgn0019890.1.mrna1.cds6;Name=FBgn0019890.1;Parent=FBgn0019890.1.mrna1;Target=FBgn0019890.1 3053 3211 +
ChrX	stalkie_big_nohaplotig	CDS	56654350	56654588	100	+	1	ID=FBgn0019890.1.mrna1.cds7;Name=FBgn0019890.1;Parent=FBgn0019890.1.mrna1;Target=FBgn0019890.1 3212 3450 +
Chr1	stalkie_big_nohaplotig	mRNA	156233866	156234243	.	+	.	ID=FBgn0020637.1.mrna1;Name=FBgn0020637.1;Parent=FBgn0020637.1.path1;Dir=sensecoverage=100.0;identity=99.4;matches=307;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	156233866	156234023	99	+	.	ID=FBgn0020637.1.mrna1.exon1;Name=FBgn0020637.1;Parent=FBgn0020637.1.mrna1;Target=FBgn0020637.1 1 158 +
Chr1	stalkie_big_nohaplotig	exon	156234093	156234243	99	+	.	ID=FBgn0020637.1.mrna1.exon2;Name=FBgn0020637.1;Parent=FBgn0020637.1.mrna1;Target=FBgn0020637.1 159 309 +
Chr1	stalkie_big_nohaplotig	CDS	156233866	156234023	99	+	0	ID=FBgn0020637.1.mrna1.cds1;Name=FBgn0020637.1;Parent=FBgn0020637.1.mrna1;Target=FBgn0020637.1 1 158 +
Chr1	stalkie_big_nohaplotig	CDS	156234093	156234243	99	+	2	ID=FBgn0020637.1.mrna1.cds2;Name=FBgn0020637.1;Parent=FBgn0020637.1.mrna1;Target=FBgn0020637.1 159 309 +
Chr2	stalkie_big_nohaplotig	mRNA	160602412	160604277	.	+	.	ID=FBgn0000658.1.mrna1;Name=FBgn0000658.1;Parent=FBgn0000658.1.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1866;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	160602412	160604277	100	+	.	ID=FBgn0000658.1.mrna1.exon1;Name=FBgn0000658.1;Parent=FBgn0000658.1.mrna1;Target=FBgn0000658.1 1866 1 .
Chr2	stalkie_big_nohaplotig	CDS	160602412	160604277	100	+	0	ID=FBgn0000658.1.mrna1.cds1;Name=FBgn0000658.1;Parent=FBgn0000658.1.mrna1;Target=FBgn0000658.1 1866 1 .
Chr2	stalkie_big_nohaplotig	mRNA	144185139	144187706	.	-	.	ID=FBgn0039818.2.mrna1;Name=FBgn0039818.2;Parent=FBgn0039818.2.path1;Dir=sensecoverage=100.0;identity=99.3;matches=2490;mismatches=18;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	144186365	144187706	99	-	.	ID=FBgn0039818.2.mrna1.exon1;Name=FBgn0039818.2;Parent=FBgn0039818.2.mrna1;Target=FBgn0039818.2 1 1342 +
Chr2	stalkie_big_nohaplotig	exon	144185139	144186304	99	-	.	ID=FBgn0039818.2.mrna1.exon2;Name=FBgn0039818.2;Parent=FBgn0039818.2.mrna1;Target=FBgn0039818.2 1343 2508 +
Chr2	stalkie_big_nohaplotig	CDS	144186365	144187706	99	-	0	ID=FBgn0039818.2.mrna1.cds1;Name=FBgn0039818.2;Parent=FBgn0039818.2.mrna1;Target=FBgn0039818.2 1 1342 +
Chr2	stalkie_big_nohaplotig	CDS	144185139	144186304	99	-	1	ID=FBgn0039818.2.mrna1.cds2;Name=FBgn0039818.2;Parent=FBgn0039818.2.mrna1;Target=FBgn0039818.2 1343 2508 +
Chr1	stalkie_big_nohaplotig	mRNA	175433797	175437887	.	-	.	ID=FBgn0030354.1.mrna1;Name=FBgn0030354.1;Parent=FBgn0030354.1.path1;Dir=sensecoverage=99.9;identity=99.7;matches=3510;mismatches=10;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	175437671	175437887	100	-	.	ID=FBgn0030354.1.mrna1.exon1;Name=FBgn0030354.1;Parent=FBgn0030354.1.mrna1;Target=FBgn0030354.1 6 222 +
Chr1	stalkie_big_nohaplotig	exon	175437452	175437609	99	-	.	ID=FBgn0030354.1.mrna1.exon2;Name=FBgn0030354.1;Parent=FBgn0030354.1.mrna1;Target=FBgn0030354.1 223 380 +
Chr1	stalkie_big_nohaplotig	exon	175437163	175437396	100	-	.	ID=FBgn0030354.1.mrna1.exon3;Name=FBgn0030354.1;Parent=FBgn0030354.1.mrna1;Target=FBgn0030354.1 381 614 +
Chr1	stalkie_big_nohaplotig	exon	175436236	175437092	99	-	.	ID=FBgn0030354.1.mrna1.exon4;Name=FBgn0030354.1;Parent=FBgn0030354.1.mrna1;Target=FBgn0030354.1 615 1471 +
Chr1	stalkie_big_nohaplotig	exon	175435108	175436175	99	-	.	ID=FBgn0030354.1.mrna1.exon5;Name=FBgn0030354.1;Parent=FBgn0030354.1.mrna1;Target=FBgn0030354.1 1472 2539 +
Chr1	stalkie_big_nohaplotig	exon	175433954	175434870	99	-	.	ID=FBgn0030354.1.mrna1.exon6;Name=FBgn0030354.1;Parent=FBgn0030354.1.mrna1;Target=FBgn0030354.1 2540 3456 +
Chr1	stalkie_big_nohaplotig	exon	175433797	175433865	100	-	.	ID=FBgn0030354.1.mrna1.exon7;Name=FBgn0030354.1;Parent=FBgn0030354.1.mrna1;Target=FBgn0030354.1 3457 3525 +
Chr1	stalkie_big_nohaplotig	CDS	175437671	175437886	100	-	0	ID=FBgn0030354.1.mrna1.cds1;Name=FBgn0030354.1;Parent=FBgn0030354.1.mrna1;Target=FBgn0030354.1 7 222 +
Chr1	stalkie_big_nohaplotig	CDS	175437452	175437609	99	-	0	ID=FBgn0030354.1.mrna1.cds2;Name=FBgn0030354.1;Parent=FBgn0030354.1.mrna1;Target=FBgn0030354.1 223 380 +
Chr1	stalkie_big_nohaplotig	CDS	175437163	175437396	100	-	2	ID=FBgn0030354.1.mrna1.cds3;Name=FBgn0030354.1;Parent=FBgn0030354.1.mrna1;Target=FBgn0030354.1 381 614 +
Chr1	stalkie_big_nohaplotig	CDS	175436236	175437092	99	-	2	ID=FBgn0030354.1.mrna1.cds4;Name=FBgn0030354.1;Parent=FBgn0030354.1.mrna1;Target=FBgn0030354.1 615 1471 +
Chr1	stalkie_big_nohaplotig	CDS	175435108	175436175	99	-	1	ID=FBgn0030354.1.mrna1.cds5;Name=FBgn0030354.1;Parent=FBgn0030354.1.mrna1;Target=FBgn0030354.1 1472 2539 +
Chr1	stalkie_big_nohaplotig	CDS	175433954	175434870	99	-	1	ID=FBgn0030354.1.mrna1.cds6;Name=FBgn0030354.1;Parent=FBgn0030354.1.mrna1;Target=FBgn0030354.1 2540 3456 +
Chr1	stalkie_big_nohaplotig	CDS	175433797	175433865	100	-	0	ID=FBgn0030354.1.mrna1.cds7;Name=FBgn0030354.1;Parent=FBgn0030354.1.mrna1;Target=FBgn0030354.1 3457 3525 +
Chr1	stalkie_big_nohaplotig	mRNA	88771450	88775817	.	+	.	ID=FBgn0031023.1.mrna1;Name=FBgn0031023.1;Parent=FBgn0031023.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=4185;mismatches=20;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	88771450	88771628	99	+	.	ID=FBgn0031023.1.mrna1.exon1;Name=FBgn0031023.1;Parent=FBgn0031023.1.mrna1;Target=FBgn0031023.1 1 179 +
Chr1	stalkie_big_nohaplotig	exon	88771684	88771760	100	+	.	ID=FBgn0031023.1.mrna1.exon2;Name=FBgn0031023.1;Parent=FBgn0031023.1.mrna1;Target=FBgn0031023.1 180 256 +
Chr1	stalkie_big_nohaplotig	exon	88771817	88772019	100	+	.	ID=FBgn0031023.1.mrna1.exon3;Name=FBgn0031023.1;Parent=FBgn0031023.1.mrna1;Target=FBgn0031023.1 257 459 +
Chr1	stalkie_big_nohaplotig	exon	88772072	88775817	99	+	.	ID=FBgn0031023.1.mrna1.exon4;Name=FBgn0031023.1;Parent=FBgn0031023.1.mrna1;Target=FBgn0031023.1 460 4206 +
Chr1	stalkie_big_nohaplotig	CDS	88771450	88771628	99	+	0	ID=FBgn0031023.1.mrna1.cds1;Name=FBgn0031023.1;Parent=FBgn0031023.1.mrna1;Target=FBgn0031023.1 1 179 +
Chr1	stalkie_big_nohaplotig	CDS	88771684	88771760	100	+	2	ID=FBgn0031023.1.mrna1.cds2;Name=FBgn0031023.1;Parent=FBgn0031023.1.mrna1;Target=FBgn0031023.1 180 256 +
Chr1	stalkie_big_nohaplotig	CDS	88771817	88772019	100	+	1	ID=FBgn0031023.1.mrna1.cds3;Name=FBgn0031023.1;Parent=FBgn0031023.1.mrna1;Target=FBgn0031023.1 257 459 +
Chr1	stalkie_big_nohaplotig	CDS	88772072	88775817	99	+	0	ID=FBgn0031023.1.mrna1.cds4;Name=FBgn0031023.1;Parent=FBgn0031023.1.mrna1;Target=FBgn0031023.1 460 4206 +
ChrX	stalkie_big_nohaplotig	mRNA	47984405	47988524	.	+	.	ID=FBgn0002044.1.mrna1;Name=FBgn0002044.1;Parent=FBgn0002044.1.path1;Dir=sensecoverage=97.6;identity=100.0;matches=3172;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	47984405	47984735	100	+	.	ID=FBgn0002044.1.mrna1.exon1;Name=FBgn0002044.1;Parent=FBgn0002044.1.mrna1;Target=FBgn0002044.1 78 408 +
ChrX	stalkie_big_nohaplotig	exon	47985500	47987950	100	+	.	ID=FBgn0002044.1.mrna1.exon2;Name=FBgn0002044.1;Parent=FBgn0002044.1.mrna1;Target=FBgn0002044.1 409 2859 +
ChrX	stalkie_big_nohaplotig	exon	47988058	47988186	100	+	.	ID=FBgn0002044.1.mrna1.exon3;Name=FBgn0002044.1;Parent=FBgn0002044.1.mrna1;Target=FBgn0002044.1 2860 2988 +
ChrX	stalkie_big_nohaplotig	exon	47988264	47988524	100	+	.	ID=FBgn0002044.1.mrna1.exon4;Name=FBgn0002044.1;Parent=FBgn0002044.1.mrna1;Target=FBgn0002044.1 2989 3249 +
ChrX	stalkie_big_nohaplotig	CDS	47984406	47984735	100	+	0	ID=FBgn0002044.1.mrna1.cds1;Name=FBgn0002044.1;Parent=FBgn0002044.1.mrna1;Target=FBgn0002044.1 79 408 +
ChrX	stalkie_big_nohaplotig	CDS	47985500	47987950	100	+	0	ID=FBgn0002044.1.mrna1.cds2;Name=FBgn0002044.1;Parent=FBgn0002044.1.mrna1;Target=FBgn0002044.1 409 2859 +
ChrX	stalkie_big_nohaplotig	CDS	47988058	47988186	100	+	0	ID=FBgn0002044.1.mrna1.cds3;Name=FBgn0002044.1;Parent=FBgn0002044.1.mrna1;Target=FBgn0002044.1 2860 2988 +
ChrX	stalkie_big_nohaplotig	CDS	47988264	47988524	100	+	0	ID=FBgn0002044.1.mrna1.cds4;Name=FBgn0002044.1;Parent=FBgn0002044.1.mrna1;Target=FBgn0002044.1 2989 3249 +
Chr2	stalkie_big_nohaplotig	mRNA	82391210	82391348	.	-	.	ID=FBgn0037941.1.mrna1;Name=FBgn0037941.1;Parent=FBgn0037941.1.path1;Dir=indeterminatecoverage=8.4;identity=99.3;matches=138;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	82391210	82391348	99	-	.	ID=FBgn0037941.1.mrna1.exon1;Name=FBgn0037941.1;Parent=FBgn0037941.1.mrna1;Target=FBgn0037941.1 139 1 .
Chr2	stalkie_big_nohaplotig	CDS	82391210	82391348	99	-	0	ID=FBgn0037941.1.mrna1.cds1;Name=FBgn0037941.1;Parent=FBgn0037941.1.mrna1;Target=FBgn0037941.1 139 1 .
Chr2	stalkie_big_nohaplotig	mRNA	100203759	100204769	.	-	.	ID=ORF2286.mrna1;Name=ORF2286;Parent=ORF2286.path1;Dir=sensecoverage=100.0;identity=99.8;matches=880;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	100204649	100204769	100	-	.	ID=ORF2286.mrna1.exon1;Name=ORF2286;Parent=ORF2286.mrna1;Target=ORF2286 1 121 +
Chr2	stalkie_big_nohaplotig	exon	100204354	100204569	100	-	.	ID=ORF2286.mrna1.exon2;Name=ORF2286;Parent=ORF2286.mrna1;Target=ORF2286 122 337 +
Chr2	stalkie_big_nohaplotig	exon	100203759	100204303	99	-	.	ID=ORF2286.mrna1.exon3;Name=ORF2286;Parent=ORF2286.mrna1;Target=ORF2286 338 882 +
Chr2	stalkie_big_nohaplotig	CDS	100204649	100204769	100	-	0	ID=ORF2286.mrna1.cds1;Name=ORF2286;Parent=ORF2286.mrna1;Target=ORF2286 1 121 +
Chr2	stalkie_big_nohaplotig	CDS	100204354	100204569	100	-	1	ID=ORF2286.mrna1.cds2;Name=ORF2286;Parent=ORF2286.mrna1;Target=ORF2286 122 337 +
Chr2	stalkie_big_nohaplotig	CDS	100203759	100204303	99	-	1	ID=ORF2286.mrna1.cds3;Name=ORF2286;Parent=ORF2286.mrna1;Target=ORF2286 338 882 +
Chr2	stalkie_big_nohaplotig	mRNA	100211058	100214606	.	-	.	ID=FBgn0051475.1.mrna1;Name=FBgn0051475.1;Parent=FBgn0051475.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1218;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	100214146	100214606	100	-	.	ID=FBgn0051475.1.mrna1.exon1;Name=FBgn0051475.1;Parent=FBgn0051475.1.mrna1;Target=FBgn0051475.1 1 461 +
Chr2	stalkie_big_nohaplotig	exon	100211535	100211947	100	-	.	ID=FBgn0051475.1.mrna1.exon2;Name=FBgn0051475.1;Parent=FBgn0051475.1.mrna1;Target=FBgn0051475.1 462 874 +
Chr2	stalkie_big_nohaplotig	exon	100211203	100211474	100	-	.	ID=FBgn0051475.1.mrna1.exon3;Name=FBgn0051475.1;Parent=FBgn0051475.1.mrna1;Target=FBgn0051475.1 875 1146 +
Chr2	stalkie_big_nohaplotig	exon	100211058	100211129	100	-	.	ID=FBgn0051475.1.mrna1.exon4;Name=FBgn0051475.1;Parent=FBgn0051475.1.mrna1;Target=FBgn0051475.1 1147 1218 +
Chr2	stalkie_big_nohaplotig	CDS	100214146	100214606	100	-	0	ID=FBgn0051475.1.mrna1.cds1;Name=FBgn0051475.1;Parent=FBgn0051475.1.mrna1;Target=FBgn0051475.1 1 461 +
Chr2	stalkie_big_nohaplotig	CDS	100211535	100211947	100	-	2	ID=FBgn0051475.1.mrna1.cds2;Name=FBgn0051475.1;Parent=FBgn0051475.1.mrna1;Target=FBgn0051475.1 462 874 +
Chr2	stalkie_big_nohaplotig	CDS	100211203	100211474	100	-	1	ID=FBgn0051475.1.mrna1.cds3;Name=FBgn0051475.1;Parent=FBgn0051475.1.mrna1;Target=FBgn0051475.1 875 1146 +
Chr2	stalkie_big_nohaplotig	CDS	100211058	100211129	100	-	0	ID=FBgn0051475.1.mrna1.cds4;Name=FBgn0051475.1;Parent=FBgn0051475.1.mrna1;Target=FBgn0051475.1 1147 1218 +
Chr2	stalkie_big_nohaplotig	mRNA	100126386	100129987	.	-	.	ID=FBgn0037614.1.mrna1;Name=FBgn0037614.1;Parent=FBgn0037614.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=423;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	100129756	100129987	100	-	.	ID=FBgn0037614.1.mrna1.exon1;Name=FBgn0037614.1;Parent=FBgn0037614.1.mrna1;Target=FBgn0037614.1 1 232 +
Chr2	stalkie_big_nohaplotig	exon	100126386	100126576	100	-	.	ID=FBgn0037614.1.mrna1.exon2;Name=FBgn0037614.1;Parent=FBgn0037614.1.mrna1;Target=FBgn0037614.1 233 423 +
Chr2	stalkie_big_nohaplotig	CDS	100129756	100129987	100	-	0	ID=FBgn0037614.1.mrna1.cds1;Name=FBgn0037614.1;Parent=FBgn0037614.1.mrna1;Target=FBgn0037614.1 1 232 +
Chr2	stalkie_big_nohaplotig	CDS	100126386	100126576	100	-	1	ID=FBgn0037614.1.mrna1.cds2;Name=FBgn0037614.1;Parent=FBgn0037614.1.mrna1;Target=FBgn0037614.1 233 423 +
Chr2	stalkie_big_nohaplotig	mRNA	149221144	149222335	.	+	.	ID=FBgn0020493.1.mrna1;Name=FBgn0020493.1;Parent=FBgn0020493.1.path1;Dir=indeterminatecoverage=61.6;identity=98.4;matches=1176;mismatches=7;indels=12;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	149221144	149222335	98	+	.	ID=FBgn0020493.1.mrna1.exon1;Name=FBgn0020493.1;Parent=FBgn0020493.1.mrna1;Target=FBgn0020493.1 1186 1 .
Chr2	stalkie_big_nohaplotig	CDS	149221144	149222335	98	+	0	ID=FBgn0020493.1.mrna1.cds1;Name=FBgn0020493.1;Parent=FBgn0020493.1.mrna1;Target=FBgn0020493.1 1186 1 .
Chr2	stalkie_big_nohaplotig	mRNA	149144010	149166520	.	-	.	ID=FBgn0020493.1.mrna2;Name=FBgn0020493.1;Parent=FBgn0020493.1.path2;Dir=sensecoverage=38.4;identity=99.9;matches=740;mismatches=0;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	149166464	149166520	100	-	.	ID=FBgn0020493.1.mrna2.exon1;Name=FBgn0020493.1;Parent=FBgn0020493.1.mrna2;Target=FBgn0020493.1 1187 1243 +
Chr2	stalkie_big_nohaplotig	exon	149164517	149164660	100	-	.	ID=FBgn0020493.1.mrna2.exon2;Name=FBgn0020493.1;Parent=FBgn0020493.1.mrna2;Target=FBgn0020493.1 1244 1387 +
Chr2	stalkie_big_nohaplotig	exon	149145501	149145722	100	-	.	ID=FBgn0020493.1.mrna2.exon3;Name=FBgn0020493.1;Parent=FBgn0020493.1.mrna2;Target=FBgn0020493.1 1388 1609 +
Chr2	stalkie_big_nohaplotig	exon	149144245	149144396	99	-	.	ID=FBgn0020493.1.mrna2.exon4;Name=FBgn0020493.1;Parent=FBgn0020493.1.mrna2;Target=FBgn0020493.1 1610 1760 +
Chr2	stalkie_big_nohaplotig	exon	149144010	149144175	100	-	.	ID=FBgn0020493.1.mrna2.exon5;Name=FBgn0020493.1;Parent=FBgn0020493.1.mrna2;Target=FBgn0020493.1 1761 1926 +
Chr2	stalkie_big_nohaplotig	CDS	149166464	149166520	100	-	1	ID=FBgn0020493.1.mrna2.cds1;Name=FBgn0020493.1;Parent=FBgn0020493.1.mrna2;Target=FBgn0020493.1 1187 1243 +
Chr2	stalkie_big_nohaplotig	CDS	149164517	149164660	100	-	1	ID=FBgn0020493.1.mrna2.cds2;Name=FBgn0020493.1;Parent=FBgn0020493.1.mrna2;Target=FBgn0020493.1 1244 1387 +
Chr2	stalkie_big_nohaplotig	CDS	149145501	149145722	100	-	1	ID=FBgn0020493.1.mrna2.cds3;Name=FBgn0020493.1;Parent=FBgn0020493.1.mrna2;Target=FBgn0020493.1 1388 1609 +
Chr2	stalkie_big_nohaplotig	CDS	149144245	149144396	99	-	1	ID=FBgn0020493.1.mrna2.cds4;Name=FBgn0020493.1;Parent=FBgn0020493.1.mrna2;Target=FBgn0020493.1 1610 1760 +
Chr2	stalkie_big_nohaplotig	CDS	149144010	149144175	100	-	2	ID=FBgn0020493.1.mrna2.cds5;Name=FBgn0020493.1;Parent=FBgn0020493.1.mrna2;Target=FBgn0020493.1 1761 1926 +
Chr1	stalkie_big_nohaplotig	mRNA	116375566	116376420	.	-	.	ID=ORF2469.mrna1;Name=ORF2469;Parent=ORF2469.path1;Dir=indeterminatecoverage=100.0;identity=98.5;matches=842;mismatches=13;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	116375566	116376420	98	-	.	ID=ORF2469.mrna1.exon1;Name=ORF2469;Parent=ORF2469.mrna1;Target=ORF2469 855 1 .
Chr1	stalkie_big_nohaplotig	CDS	116375566	116376420	98	-	0	ID=ORF2469.mrna1.cds1;Name=ORF2469;Parent=ORF2469.mrna1;Target=ORF2469 855 1 .
Chr1	stalkie_big_nohaplotig	mRNA	156347244	156355578	.	-	.	ID=FBgn0086778.1.mrna2;Name=FBgn0086778.1;Parent=FBgn0086778.1.path2;Dir=sensecoverage=40.8;identity=99.9;matches=670;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	156355469	156355578	99	-	.	ID=FBgn0086778.1.mrna2.exon1;Name=FBgn0086778.1;Parent=FBgn0086778.1.mrna2;Target=FBgn0086778.1 968 1077 +
Chr1	stalkie_big_nohaplotig	exon	156354115	156354269	100	-	.	ID=FBgn0086778.1.mrna2.exon2;Name=FBgn0086778.1;Parent=FBgn0086778.1.mrna2;Target=FBgn0086778.1 1078 1232 +
Chr1	stalkie_big_nohaplotig	exon	156353825	156353941	100	-	.	ID=FBgn0086778.1.mrna2.exon3;Name=FBgn0086778.1;Parent=FBgn0086778.1.mrna2;Target=FBgn0086778.1 1233 1349 +
Chr1	stalkie_big_nohaplotig	exon	156347526	156347670	100	-	.	ID=FBgn0086778.1.mrna2.exon4;Name=FBgn0086778.1;Parent=FBgn0086778.1.mrna2;Target=FBgn0086778.1 1350 1494 +
Chr1	stalkie_big_nohaplotig	exon	156347244	156347387	100	-	.	ID=FBgn0086778.1.mrna2.exon5;Name=FBgn0086778.1;Parent=FBgn0086778.1.mrna2;Target=FBgn0086778.1 1495 1638 +
Chr1	stalkie_big_nohaplotig	CDS	156355469	156355578	99	-	1	ID=FBgn0086778.1.mrna2.cds1;Name=FBgn0086778.1;Parent=FBgn0086778.1.mrna2;Target=FBgn0086778.1 968 1077 +
Chr1	stalkie_big_nohaplotig	CDS	156354115	156354269	100	-	0	ID=FBgn0086778.1.mrna2.cds2;Name=FBgn0086778.1;Parent=FBgn0086778.1.mrna2;Target=FBgn0086778.1 1078 1232 +
Chr1	stalkie_big_nohaplotig	CDS	156353825	156353941	100	-	2	ID=FBgn0086778.1.mrna2.cds3;Name=FBgn0086778.1;Parent=FBgn0086778.1.mrna2;Target=FBgn0086778.1 1233 1349 +
Chr1	stalkie_big_nohaplotig	CDS	156347526	156347670	100	-	2	ID=FBgn0086778.1.mrna2.cds4;Name=FBgn0086778.1;Parent=FBgn0086778.1.mrna2;Target=FBgn0086778.1 1350 1494 +
Chr1	stalkie_big_nohaplotig	CDS	156347244	156347387	100	-	0	ID=FBgn0086778.1.mrna2.cds5;Name=FBgn0086778.1;Parent=FBgn0086778.1.mrna2;Target=FBgn0086778.1 1495 1638 +
Chr1	stalkie_big_nohaplotig	mRNA	145399140	145402854	.	-	.	ID=FBgn0024997.1.mrna1;Name=FBgn0024997.1;Parent=FBgn0024997.1.path1;Dir=sensecoverage=100.0;identity=98.6;matches=1233;mismatches=18;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	145402837	145402854	100	-	.	ID=FBgn0024997.1.mrna1.exon1;Name=FBgn0024997.1;Parent=FBgn0024997.1.mrna1;Target=FBgn0024997.1 1 18 +
Chr1	stalkie_big_nohaplotig	exon	145399861	145400442	97	-	.	ID=FBgn0024997.1.mrna1.exon2;Name=FBgn0024997.1;Parent=FBgn0024997.1.mrna1;Target=FBgn0024997.1 19 600 +
Chr1	stalkie_big_nohaplotig	exon	145399140	145399790	99	-	.	ID=FBgn0024997.1.mrna1.exon3;Name=FBgn0024997.1;Parent=FBgn0024997.1.mrna1;Target=FBgn0024997.1 601 1251 +
Chr1	stalkie_big_nohaplotig	CDS	145402837	145402854	100	-	0	ID=FBgn0024997.1.mrna1.cds1;Name=FBgn0024997.1;Parent=FBgn0024997.1.mrna1;Target=FBgn0024997.1 1 18 +
Chr1	stalkie_big_nohaplotig	CDS	145399861	145400442	97	-	0	ID=FBgn0024997.1.mrna1.cds2;Name=FBgn0024997.1;Parent=FBgn0024997.1.mrna1;Target=FBgn0024997.1 19 600 +
Chr1	stalkie_big_nohaplotig	CDS	145399140	145399790	99	-	0	ID=FBgn0024997.1.mrna1.cds3;Name=FBgn0024997.1;Parent=FBgn0024997.1.mrna1;Target=FBgn0024997.1 601 1251 +
Chr1	stalkie_big_nohaplotig	mRNA	167190549	167198417	.	+	.	ID=FBgn0051638.1.mrna1;Name=FBgn0051638.1;Parent=FBgn0051638.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1570;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	167190549	167190710	100	+	.	ID=FBgn0051638.1.mrna1.exon1;Name=FBgn0051638.1;Parent=FBgn0051638.1.mrna1;Target=FBgn0051638.1 1 162 +
Chr1	stalkie_big_nohaplotig	exon	167190770	167190880	100	+	.	ID=FBgn0051638.1.mrna1.exon2;Name=FBgn0051638.1;Parent=FBgn0051638.1.mrna1;Target=FBgn0051638.1 163 273 +
Chr1	stalkie_big_nohaplotig	exon	167191000	167191193	100	+	.	ID=FBgn0051638.1.mrna1.exon3;Name=FBgn0051638.1;Parent=FBgn0051638.1.mrna1;Target=FBgn0051638.1 274 467 +
Chr1	stalkie_big_nohaplotig	exon	167191261	167191366	99	+	.	ID=FBgn0051638.1.mrna1.exon4;Name=FBgn0051638.1;Parent=FBgn0051638.1.mrna1;Target=FBgn0051638.1 468 573 +
Chr1	stalkie_big_nohaplotig	exon	167191426	167191516	100	+	.	ID=FBgn0051638.1.mrna1.exon5;Name=FBgn0051638.1;Parent=FBgn0051638.1.mrna1;Target=FBgn0051638.1 574 664 +
Chr1	stalkie_big_nohaplotig	exon	167191581	167191719	98	+	.	ID=FBgn0051638.1.mrna1.exon6;Name=FBgn0051638.1;Parent=FBgn0051638.1.mrna1;Target=FBgn0051638.1 665 803 +
Chr1	stalkie_big_nohaplotig	exon	167191818	167191911	100	+	.	ID=FBgn0051638.1.mrna1.exon7;Name=FBgn0051638.1;Parent=FBgn0051638.1.mrna1;Target=FBgn0051638.1 804 897 +
Chr1	stalkie_big_nohaplotig	exon	167191972	167192103	100	+	.	ID=FBgn0051638.1.mrna1.exon8;Name=FBgn0051638.1;Parent=FBgn0051638.1.mrna1;Target=FBgn0051638.1 898 1029 +
Chr1	stalkie_big_nohaplotig	exon	167192167	167192373	100	+	.	ID=FBgn0051638.1.mrna1.exon9;Name=FBgn0051638.1;Parent=FBgn0051638.1.mrna1;Target=FBgn0051638.1 1030 1236 +
Chr1	stalkie_big_nohaplotig	exon	167192435	167192542	100	+	.	ID=FBgn0051638.1.mrna1.exon10;Name=FBgn0051638.1;Parent=FBgn0051638.1.mrna1;Target=FBgn0051638.1 1237 1344 +
Chr1	stalkie_big_nohaplotig	exon	167198187	167198417	99	+	.	ID=FBgn0051638.1.mrna1.exon11;Name=FBgn0051638.1;Parent=FBgn0051638.1.mrna1;Target=FBgn0051638.1 1345 1575 +
Chr1	stalkie_big_nohaplotig	CDS	167190549	167190710	100	+	0	ID=FBgn0051638.1.mrna1.cds1;Name=FBgn0051638.1;Parent=FBgn0051638.1.mrna1;Target=FBgn0051638.1 1 162 +
Chr1	stalkie_big_nohaplotig	CDS	167190770	167190880	100	+	0	ID=FBgn0051638.1.mrna1.cds2;Name=FBgn0051638.1;Parent=FBgn0051638.1.mrna1;Target=FBgn0051638.1 163 273 +
Chr1	stalkie_big_nohaplotig	CDS	167191000	167191193	100	+	0	ID=FBgn0051638.1.mrna1.cds3;Name=FBgn0051638.1;Parent=FBgn0051638.1.mrna1;Target=FBgn0051638.1 274 467 +
Chr1	stalkie_big_nohaplotig	CDS	167191261	167191366	99	+	2	ID=FBgn0051638.1.mrna1.cds4;Name=FBgn0051638.1;Parent=FBgn0051638.1.mrna1;Target=FBgn0051638.1 468 573 +
Chr1	stalkie_big_nohaplotig	CDS	167191426	167191516	100	+	0	ID=FBgn0051638.1.mrna1.cds5;Name=FBgn0051638.1;Parent=FBgn0051638.1.mrna1;Target=FBgn0051638.1 574 664 +
Chr1	stalkie_big_nohaplotig	CDS	167191581	167191719	98	+	1	ID=FBgn0051638.1.mrna1.cds6;Name=FBgn0051638.1;Parent=FBgn0051638.1.mrna1;Target=FBgn0051638.1 665 803 +
Chr1	stalkie_big_nohaplotig	CDS	167191818	167191911	100	+	2	ID=FBgn0051638.1.mrna1.cds7;Name=FBgn0051638.1;Parent=FBgn0051638.1.mrna1;Target=FBgn0051638.1 804 897 +
Chr1	stalkie_big_nohaplotig	CDS	167191972	167192103	100	+	0	ID=FBgn0051638.1.mrna1.cds8;Name=FBgn0051638.1;Parent=FBgn0051638.1.mrna1;Target=FBgn0051638.1 898 1029 +
Chr1	stalkie_big_nohaplotig	CDS	167192167	167192373	100	+	0	ID=FBgn0051638.1.mrna1.cds9;Name=FBgn0051638.1;Parent=FBgn0051638.1.mrna1;Target=FBgn0051638.1 1030 1236 +
Chr1	stalkie_big_nohaplotig	CDS	167192435	167192542	100	+	0	ID=FBgn0051638.1.mrna1.cds10;Name=FBgn0051638.1;Parent=FBgn0051638.1.mrna1;Target=FBgn0051638.1 1237 1344 +
Chr1	stalkie_big_nohaplotig	CDS	167198187	167198417	99	+	0	ID=FBgn0051638.1.mrna1.cds11;Name=FBgn0051638.1;Parent=FBgn0051638.1.mrna1;Target=FBgn0051638.1 1345 1575 +
Chr1	stalkie_big_nohaplotig	mRNA	8162366	8163400	.	+	.	ID=FBgn0042127.1.mrna1;Name=FBgn0042127.1;Parent=FBgn0042127.1.path1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1032;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	8162366	8163400	99	+	.	ID=FBgn0042127.1.mrna1.exon1;Name=FBgn0042127.1;Parent=FBgn0042127.1.mrna1;Target=FBgn0042127.1 1035 1 .
Chr1	stalkie_big_nohaplotig	CDS	8162366	8163400	99	+	0	ID=FBgn0042127.1.mrna1.cds1;Name=FBgn0042127.1;Parent=FBgn0042127.1.mrna1;Target=FBgn0042127.1 1035 1 .
Chr1	stalkie_big_nohaplotig	mRNA	110144435	110150270	.	-	.	ID=FBgn0035424.1.mrna1;Name=FBgn0035424.1;Parent=FBgn0035424.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=4661;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	110149521	110150270	99	-	.	ID=FBgn0035424.1.mrna1.exon1;Name=FBgn0035424.1;Parent=FBgn0035424.1.mrna1;Target=FBgn0035424.1 3 752 +
Chr1	stalkie_big_nohaplotig	exon	110149200	110149449	99	-	.	ID=FBgn0035424.1.mrna1.exon2;Name=FBgn0035424.1;Parent=FBgn0035424.1.mrna1;Target=FBgn0035424.1 753 1002 +
Chr1	stalkie_big_nohaplotig	exon	110148995	110149135	100	-	.	ID=FBgn0035424.1.mrna1.exon3;Name=FBgn0035424.1;Parent=FBgn0035424.1.mrna1;Target=FBgn0035424.1 1003 1143 +
Chr1	stalkie_big_nohaplotig	exon	110148620	110148856	100	-	.	ID=FBgn0035424.1.mrna1.exon4;Name=FBgn0035424.1;Parent=FBgn0035424.1.mrna1;Target=FBgn0035424.1 1144 1380 +
Chr1	stalkie_big_nohaplotig	exon	110147966	110148524	99	-	.	ID=FBgn0035424.1.mrna1.exon5;Name=FBgn0035424.1;Parent=FBgn0035424.1.mrna1;Target=FBgn0035424.1 1381 1939 +
Chr1	stalkie_big_nohaplotig	exon	110147341	110147894	100	-	.	ID=FBgn0035424.1.mrna1.exon6;Name=FBgn0035424.1;Parent=FBgn0035424.1.mrna1;Target=FBgn0035424.1 1940 2493 +
Chr1	stalkie_big_nohaplotig	exon	110146335	110146803	100	-	.	ID=FBgn0035424.1.mrna1.exon7;Name=FBgn0035424.1;Parent=FBgn0035424.1.mrna1;Target=FBgn0035424.1 2494 2962 +
Chr1	stalkie_big_nohaplotig	exon	110144714	110146216	99	-	.	ID=FBgn0035424.1.mrna1.exon8;Name=FBgn0035424.1;Parent=FBgn0035424.1.mrna1;Target=FBgn0035424.1 2963 4465 +
Chr1	stalkie_big_nohaplotig	exon	110144435	110144637	99	-	.	ID=FBgn0035424.1.mrna1.exon9;Name=FBgn0035424.1;Parent=FBgn0035424.1.mrna1;Target=FBgn0035424.1 4466 4668 +
Chr1	stalkie_big_nohaplotig	CDS	110149521	110150269	99	-	0	ID=FBgn0035424.1.mrna1.cds1;Name=FBgn0035424.1;Parent=FBgn0035424.1.mrna1;Target=FBgn0035424.1 4 752 +
Chr1	stalkie_big_nohaplotig	CDS	110149200	110149449	99	-	2	ID=FBgn0035424.1.mrna1.cds2;Name=FBgn0035424.1;Parent=FBgn0035424.1.mrna1;Target=FBgn0035424.1 753 1002 +
Chr1	stalkie_big_nohaplotig	CDS	110148995	110149135	100	-	0	ID=FBgn0035424.1.mrna1.cds3;Name=FBgn0035424.1;Parent=FBgn0035424.1.mrna1;Target=FBgn0035424.1 1003 1143 +
Chr1	stalkie_big_nohaplotig	CDS	110148620	110148856	100	-	0	ID=FBgn0035424.1.mrna1.cds4;Name=FBgn0035424.1;Parent=FBgn0035424.1.mrna1;Target=FBgn0035424.1 1144 1380 +
Chr1	stalkie_big_nohaplotig	CDS	110147966	110148524	99	-	0	ID=FBgn0035424.1.mrna1.cds5;Name=FBgn0035424.1;Parent=FBgn0035424.1.mrna1;Target=FBgn0035424.1 1381 1939 +
Chr1	stalkie_big_nohaplotig	CDS	110147341	110147894	100	-	1	ID=FBgn0035424.1.mrna1.cds6;Name=FBgn0035424.1;Parent=FBgn0035424.1.mrna1;Target=FBgn0035424.1 1940 2493 +
Chr1	stalkie_big_nohaplotig	CDS	110146335	110146803	100	-	0	ID=FBgn0035424.1.mrna1.cds7;Name=FBgn0035424.1;Parent=FBgn0035424.1.mrna1;Target=FBgn0035424.1 2494 2962 +
Chr1	stalkie_big_nohaplotig	CDS	110144714	110146216	99	-	1	ID=FBgn0035424.1.mrna1.cds8;Name=FBgn0035424.1;Parent=FBgn0035424.1.mrna1;Target=FBgn0035424.1 2963 4465 +
Chr1	stalkie_big_nohaplotig	CDS	110144435	110144637	99	-	1	ID=FBgn0035424.1.mrna1.cds9;Name=FBgn0035424.1;Parent=FBgn0035424.1.mrna1;Target=FBgn0035424.1 4466 4668 +
Chr1	stalkie_big_nohaplotig	mRNA	47958206	47965227	.	+	.	ID=FBgn0032047.1.mrna1;Name=FBgn0032047.1;Parent=FBgn0032047.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=1224;mismatches=6;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	47958206	47958224	100	+	.	ID=FBgn0032047.1.mrna1.exon1;Name=FBgn0032047.1;Parent=FBgn0032047.1.mrna1;Target=FBgn0032047.1 1 19 +
Chr1	stalkie_big_nohaplotig	exon	47962643	47963748	99	+	.	ID=FBgn0032047.1.mrna1.exon2;Name=FBgn0032047.1;Parent=FBgn0032047.1.mrna1;Target=FBgn0032047.1 20 1125 +
Chr1	stalkie_big_nohaplotig	exon	47965123	47965227	97	+	.	ID=FBgn0032047.1.mrna1.exon3;Name=FBgn0032047.1;Parent=FBgn0032047.1.mrna1;Target=FBgn0032047.1 1126 1230 +
Chr1	stalkie_big_nohaplotig	CDS	47958206	47958224	100	+	0	ID=FBgn0032047.1.mrna1.cds1;Name=FBgn0032047.1;Parent=FBgn0032047.1.mrna1;Target=FBgn0032047.1 1 19 +
Chr1	stalkie_big_nohaplotig	CDS	47962643	47963748	99	+	1	ID=FBgn0032047.1.mrna1.cds2;Name=FBgn0032047.1;Parent=FBgn0032047.1.mrna1;Target=FBgn0032047.1 20 1125 +
Chr1	stalkie_big_nohaplotig	CDS	47965123	47965227	97	+	0	ID=FBgn0032047.1.mrna1.cds3;Name=FBgn0032047.1;Parent=FBgn0032047.1.mrna1;Target=FBgn0032047.1 1126 1230 +
Chr2	stalkie_big_nohaplotig	mRNA	29898080	29899218	.	-	.	ID=FBgn0033304.5.mrna1;Name=FBgn0033304.5;Parent=FBgn0033304.5.path1;Dir=sensecoverage=99.8;identity=97.3;matches=1040;mismatches=29;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	29898564	29899218	98	-	.	ID=FBgn0033304.5.mrna1.exon1;Name=FBgn0033304.5;Parent=FBgn0033304.5.mrna1;Target=FBgn0033304.5 1 655 +
Chr2	stalkie_big_nohaplotig	exon	29898080	29898493	95	-	.	ID=FBgn0033304.5.mrna1.exon2;Name=FBgn0033304.5;Parent=FBgn0033304.5.mrna1;Target=FBgn0033304.5 656 1069 +
Chr2	stalkie_big_nohaplotig	CDS	29898564	29899218	98	-	0	ID=FBgn0033304.5.mrna1.cds1;Name=FBgn0033304.5;Parent=FBgn0033304.5.mrna1;Target=FBgn0033304.5 1 655 +
Chr2	stalkie_big_nohaplotig	CDS	29898081	29898493	95	-	1	ID=FBgn0033304.5.mrna1.cds2;Name=FBgn0033304.5;Parent=FBgn0033304.5.mrna1;Target=FBgn0033304.5 656 1068 +
Chr1	stalkie_big_nohaplotig	mRNA	131265027	131266168	.	-	.	ID=ORF1705.mrna1;Name=ORF1705;Parent=ORF1705.path1;Dir=sensecoverage=99.8;identity=97.1;matches=988;mismatches=30;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	131265625	131266168	96	-	.	ID=ORF1705.mrna1.exon1;Name=ORF1705;Parent=ORF1705.mrna1;Target=ORF1705 3 546 +
Chr1	stalkie_big_nohaplotig	exon	131265027	131265500	97	-	.	ID=ORF1705.mrna1.exon2;Name=ORF1705;Parent=ORF1705.mrna1;Target=ORF1705 547 1020 +
Chr1	stalkie_big_nohaplotig	CDS	131265625	131266131	97	-	0	ID=ORF1705.mrna1.cds1;Name=ORF1705;Parent=ORF1705.mrna1;Target=ORF1705 40 546 +
Chr1	stalkie_big_nohaplotig	CDS	131265027	131265500	97	-	0	ID=ORF1705.mrna1.cds2;Name=ORF1705;Parent=ORF1705.mrna1;Target=ORF1705 547 1020 +
Chr1	stalkie_big_nohaplotig	mRNA	41712286	41731997	.	-	.	ID=FBgn0038194.1.mrna1;Name=FBgn0038194.1;Parent=FBgn0038194.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1553;mismatches=1;indels=4;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	41731554	41731997	99	-	.	ID=FBgn0038194.1.mrna1.exon1;Name=FBgn0038194.1;Parent=FBgn0038194.1.mrna1;Target=FBgn0038194.1 1 440 +
Chr1	stalkie_big_nohaplotig	exon	41723831	41723929	100	-	.	ID=FBgn0038194.1.mrna1.exon2;Name=FBgn0038194.1;Parent=FBgn0038194.1.mrna1;Target=FBgn0038194.1 441 539 +
Chr1	stalkie_big_nohaplotig	exon	41723625	41723777	100	-	.	ID=FBgn0038194.1.mrna1.exon3;Name=FBgn0038194.1;Parent=FBgn0038194.1.mrna1;Target=FBgn0038194.1 540 692 +
Chr1	stalkie_big_nohaplotig	exon	41723530	41723565	100	-	.	ID=FBgn0038194.1.mrna1.exon4;Name=FBgn0038194.1;Parent=FBgn0038194.1.mrna1;Target=FBgn0038194.1 693 728 +
Chr1	stalkie_big_nohaplotig	exon	41713155	41713315	100	-	.	ID=FBgn0038194.1.mrna1.exon5;Name=FBgn0038194.1;Parent=FBgn0038194.1.mrna1;Target=FBgn0038194.1 729 889 +
Chr1	stalkie_big_nohaplotig	exon	41712855	41713088	100	-	.	ID=FBgn0038194.1.mrna1.exon6;Name=FBgn0038194.1;Parent=FBgn0038194.1.mrna1;Target=FBgn0038194.1 890 1123 +
Chr1	stalkie_big_nohaplotig	exon	41712542	41712790	100	-	.	ID=FBgn0038194.1.mrna1.exon7;Name=FBgn0038194.1;Parent=FBgn0038194.1.mrna1;Target=FBgn0038194.1 1124 1372 +
Chr1	stalkie_big_nohaplotig	exon	41712286	41712467	99	-	.	ID=FBgn0038194.1.mrna1.exon8;Name=FBgn0038194.1;Parent=FBgn0038194.1.mrna1;Target=FBgn0038194.1 1373 1554 +
Chr1	stalkie_big_nohaplotig	CDS	41731554	41731717	100	-	0	ID=FBgn0038194.1.mrna1.cds1;Name=FBgn0038194.1;Parent=FBgn0038194.1.mrna1;Target=FBgn0038194.1 277 440 +
Chr1	stalkie_big_nohaplotig	CDS	41723831	41723929	100	-	2	ID=FBgn0038194.1.mrna1.cds2;Name=FBgn0038194.1;Parent=FBgn0038194.1.mrna1;Target=FBgn0038194.1 441 539 +
Chr1	stalkie_big_nohaplotig	CDS	41723625	41723777	100	-	2	ID=FBgn0038194.1.mrna1.cds3;Name=FBgn0038194.1;Parent=FBgn0038194.1.mrna1;Target=FBgn0038194.1 540 692 +
Chr1	stalkie_big_nohaplotig	CDS	41723530	41723565	100	-	2	ID=FBgn0038194.1.mrna1.cds4;Name=FBgn0038194.1;Parent=FBgn0038194.1.mrna1;Target=FBgn0038194.1 693 728 +
Chr1	stalkie_big_nohaplotig	CDS	41713155	41713315	100	-	2	ID=FBgn0038194.1.mrna1.cds5;Name=FBgn0038194.1;Parent=FBgn0038194.1.mrna1;Target=FBgn0038194.1 729 889 +
Chr1	stalkie_big_nohaplotig	CDS	41712855	41713088	100	-	1	ID=FBgn0038194.1.mrna1.cds6;Name=FBgn0038194.1;Parent=FBgn0038194.1.mrna1;Target=FBgn0038194.1 890 1123 +
Chr1	stalkie_big_nohaplotig	CDS	41712542	41712790	100	-	1	ID=FBgn0038194.1.mrna1.cds7;Name=FBgn0038194.1;Parent=FBgn0038194.1.mrna1;Target=FBgn0038194.1 1124 1372 +
Chr1	stalkie_big_nohaplotig	CDS	41712286	41712467	99	-	1	ID=FBgn0038194.1.mrna1.cds8;Name=FBgn0038194.1;Parent=FBgn0038194.1.mrna1;Target=FBgn0038194.1 1373 1554 +
ChrX	stalkie_big_nohaplotig	mRNA	16197485	16199562	.	+	.	ID=FBgn0022023.1.mrna1;Name=FBgn0022023.1;Parent=FBgn0022023.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1911;mismatches=3;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	16197485	16198378	99	+	.	ID=FBgn0022023.1.mrna1.exon1;Name=FBgn0022023.1;Parent=FBgn0022023.1.mrna1;Target=FBgn0022023.1 1 894 +
ChrX	stalkie_big_nohaplotig	exon	16198475	16199152	100	+	.	ID=FBgn0022023.1.mrna1.exon2;Name=FBgn0022023.1;Parent=FBgn0022023.1.mrna1;Target=FBgn0022023.1 895 1572 +
ChrX	stalkie_big_nohaplotig	exon	16199221	16199562	100	+	.	ID=FBgn0022023.1.mrna1.exon3;Name=FBgn0022023.1;Parent=FBgn0022023.1.mrna1;Target=FBgn0022023.1 1573 1914 +
ChrX	stalkie_big_nohaplotig	CDS	16197485	16198378	99	+	0	ID=FBgn0022023.1.mrna1.cds1;Name=FBgn0022023.1;Parent=FBgn0022023.1.mrna1;Target=FBgn0022023.1 1 894 +
ChrX	stalkie_big_nohaplotig	CDS	16198475	16199152	100	+	0	ID=FBgn0022023.1.mrna1.cds2;Name=FBgn0022023.1;Parent=FBgn0022023.1.mrna1;Target=FBgn0022023.1 895 1572 +
ChrX	stalkie_big_nohaplotig	CDS	16199221	16199562	100	+	0	ID=FBgn0022023.1.mrna1.cds3;Name=FBgn0022023.1;Parent=FBgn0022023.1.mrna1;Target=FBgn0022023.1 1573 1914 +
Chr2	stalkie_big_nohaplotig	mRNA	29434140	29434958	.	-	.	ID=FBgn0259142.1.mrna1;Name=FBgn0259142.1;Parent=FBgn0259142.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=752;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	29434778	29434958	100	-	.	ID=FBgn0259142.1.mrna1.exon1;Name=FBgn0259142.1;Parent=FBgn0259142.1.mrna1;Target=FBgn0259142.1 1 181 +
Chr2	stalkie_big_nohaplotig	exon	29434140	29434711	99	-	.	ID=FBgn0259142.1.mrna1.exon2;Name=FBgn0259142.1;Parent=FBgn0259142.1.mrna1;Target=FBgn0259142.1 182 753 +
Chr2	stalkie_big_nohaplotig	CDS	29434778	29434958	100	-	0	ID=FBgn0259142.1.mrna1.cds1;Name=FBgn0259142.1;Parent=FBgn0259142.1.mrna1;Target=FBgn0259142.1 1 181 +
Chr2	stalkie_big_nohaplotig	CDS	29434140	29434711	99	-	1	ID=FBgn0259142.1.mrna1.cds2;Name=FBgn0259142.1;Parent=FBgn0259142.1.mrna1;Target=FBgn0259142.1 182 753 +
Chr1	stalkie_big_nohaplotig	mRNA	29792141	29796404	.	+	.	ID=FBgn0035807.1.mrna1;Name=FBgn0035807.1;Parent=FBgn0035807.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1427;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	29792141	29792588	99	+	.	ID=FBgn0035807.1.mrna1.exon1;Name=FBgn0035807.1;Parent=FBgn0035807.1.mrna1;Target=FBgn0035807.1 1 448 +
Chr1	stalkie_big_nohaplotig	exon	29795422	29796404	99	+	.	ID=FBgn0035807.1.mrna1.exon2;Name=FBgn0035807.1;Parent=FBgn0035807.1.mrna1;Target=FBgn0035807.1 449 1431 +
Chr1	stalkie_big_nohaplotig	CDS	29792141	29792588	99	+	0	ID=FBgn0035807.1.mrna1.cds1;Name=FBgn0035807.1;Parent=FBgn0035807.1.mrna1;Target=FBgn0035807.1 1 448 +
Chr1	stalkie_big_nohaplotig	CDS	29795422	29796404	99	+	1	ID=FBgn0035807.1.mrna1.cds2;Name=FBgn0035807.1;Parent=FBgn0035807.1.mrna1;Target=FBgn0035807.1 449 1431 +
Chr1	stalkie_big_nohaplotig	mRNA	29772036	29773568	.	+	.	ID=FBgn0261788.2.mrna1;Name=FBgn0261788.2;Parent=FBgn0261788.2.path1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1526;mismatches=7;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	29772036	29773568	99	+	.	ID=FBgn0261788.2.mrna1.exon1;Name=FBgn0261788.2;Parent=FBgn0261788.2.mrna1;Target=FBgn0261788.2 1533 1 .
Chr1	stalkie_big_nohaplotig	CDS	29772036	29773568	99	+	0	ID=FBgn0261788.2.mrna1.cds1;Name=FBgn0261788.2;Parent=FBgn0261788.2.mrna1;Target=FBgn0261788.2 1533 1 .
Chr1	stalkie_big_nohaplotig	mRNA	140492185	140494065	.	-	.	ID=ORF410.mrna1;Name=ORF410;Parent=ORF410.path1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1863;mismatches=12;indels=9;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	140492185	140494065	98	-	.	ID=ORF410.mrna1.exon1;Name=ORF410;Parent=ORF410.mrna1;Target=ORF410 1878 1 .
Chr1	stalkie_big_nohaplotig	CDS	140492185	140494065	98	-	0	ID=ORF410.mrna1.cds1;Name=ORF410;Parent=ORF410.mrna1;Target=ORF410 1878 1 .
Chr2	stalkie_big_nohaplotig	mRNA	28904497	28905522	.	+	.	ID=FBgn0034382.1.mrna1;Name=FBgn0034382.1;Parent=FBgn0034382.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=906;mismatches=6;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	28904497	28904638	100	+	.	ID=FBgn0034382.1.mrna1.exon1;Name=FBgn0034382.1;Parent=FBgn0034382.1.mrna1;Target=FBgn0034382.1 1 142 +
Chr2	stalkie_big_nohaplotig	exon	28904698	28904888	100	+	.	ID=FBgn0034382.1.mrna1.exon2;Name=FBgn0034382.1;Parent=FBgn0034382.1.mrna1;Target=FBgn0034382.1 143 333 +
Chr2	stalkie_big_nohaplotig	exon	28904944	28905522	98	+	.	ID=FBgn0034382.1.mrna1.exon3;Name=FBgn0034382.1;Parent=FBgn0034382.1.mrna1;Target=FBgn0034382.1 334 912 +
Chr2	stalkie_big_nohaplotig	CDS	28904497	28904638	100	+	0	ID=FBgn0034382.1.mrna1.cds1;Name=FBgn0034382.1;Parent=FBgn0034382.1.mrna1;Target=FBgn0034382.1 1 142 +
Chr2	stalkie_big_nohaplotig	CDS	28904698	28904888	100	+	1	ID=FBgn0034382.1.mrna1.cds2;Name=FBgn0034382.1;Parent=FBgn0034382.1.mrna1;Target=FBgn0034382.1 143 333 +
Chr2	stalkie_big_nohaplotig	CDS	28904944	28905522	98	+	0	ID=FBgn0034382.1.mrna1.cds3;Name=FBgn0034382.1;Parent=FBgn0034382.1.mrna1;Target=FBgn0034382.1 334 912 +
Chr1	stalkie_big_nohaplotig	mRNA	171416827	171418730	.	+	.	ID=FBgn0036819.1.mrna1;Name=FBgn0036819.1;Parent=FBgn0036819.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=832;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	171416827	171417403	99	+	.	ID=FBgn0036819.1.mrna1.exon1;Name=FBgn0036819.1;Parent=FBgn0036819.1.mrna1;Target=FBgn0036819.1 1 577 +
Chr1	stalkie_big_nohaplotig	exon	171417457	171417618	100	+	.	ID=FBgn0036819.1.mrna1.exon2;Name=FBgn0036819.1;Parent=FBgn0036819.1.mrna1;Target=FBgn0036819.1 578 739 +
Chr1	stalkie_big_nohaplotig	exon	171418636	171418730	100	+	.	ID=FBgn0036819.1.mrna1.exon3;Name=FBgn0036819.1;Parent=FBgn0036819.1.mrna1;Target=FBgn0036819.1 740 834 +
Chr1	stalkie_big_nohaplotig	CDS	171416827	171417403	99	+	0	ID=FBgn0036819.1.mrna1.cds1;Name=FBgn0036819.1;Parent=FBgn0036819.1.mrna1;Target=FBgn0036819.1 1 577 +
Chr1	stalkie_big_nohaplotig	CDS	171417457	171417618	100	+	1	ID=FBgn0036819.1.mrna1.cds2;Name=FBgn0036819.1;Parent=FBgn0036819.1.mrna1;Target=FBgn0036819.1 578 739 +
Chr1	stalkie_big_nohaplotig	CDS	171418636	171418730	100	+	1	ID=FBgn0036819.1.mrna1.cds3;Name=FBgn0036819.1;Parent=FBgn0036819.1.mrna1;Target=FBgn0036819.1 740 834 +
Chr1	stalkie_big_nohaplotig	mRNA	108062106	108063889	.	-	.	ID=FBgn0259700.1.mrna1;Name=FBgn0259700.1;Parent=FBgn0259700.1.path1;Dir=sensecoverage=100.0;identity=98.5;matches=1717;mismatches=5;indels=21;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	108063600	108063889	99	-	.	ID=FBgn0259700.1.mrna1.exon1;Name=FBgn0259700.1;Parent=FBgn0259700.1.mrna1;Target=FBgn0259700.1 1 290 +
Chr1	stalkie_big_nohaplotig	exon	108062106	108063537	98	-	.	ID=FBgn0259700.1.mrna1.exon2;Name=FBgn0259700.1;Parent=FBgn0259700.1.mrna1;Target=FBgn0259700.1 291 1743 +
Chr1	stalkie_big_nohaplotig	CDS	108063600	108063889	99	-	0	ID=FBgn0259700.1.mrna1.cds1;Name=FBgn0259700.1;Parent=FBgn0259700.1.mrna1;Target=FBgn0259700.1 1 290 +
Chr1	stalkie_big_nohaplotig	CDS	108062106	108063537	98	-	2	ID=FBgn0259700.1.mrna1.cds2;Name=FBgn0259700.1;Parent=FBgn0259700.1.mrna1;Target=FBgn0259700.1 291 1743 +
Chr2	stalkie_big_nohaplotig	mRNA	58945679	58945992	.	-	.	ID=FBgn0053988.1.mrna1;Name=FBgn0053988.1;Parent=FBgn0053988.1.path1;Dir=indeterminatecoverage=13.8;identity=98.4;matches=309;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	58945679	58945992	98	-	.	ID=FBgn0053988.1.mrna1.exon1;Name=FBgn0053988.1;Parent=FBgn0053988.1.mrna1;Target=FBgn0053988.1 314 1 .
Chr2	stalkie_big_nohaplotig	CDS	58945679	58945992	98	-	0	ID=FBgn0053988.1.mrna1.cds1;Name=FBgn0053988.1;Parent=FBgn0053988.1.mrna1;Target=FBgn0053988.1 314 1 .
Chr2	stalkie_big_nohaplotig	mRNA	59012816	59051013	.	+	.	ID=FBgn0053988.1.mrna2;Name=FBgn0053988.1;Parent=FBgn0053988.1.path2;Dir=sensecoverage=86.2;identity=99.9;matches=1928;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	59012816	59012821	100	+	.	ID=FBgn0053988.1.mrna2.exon1;Name=FBgn0053988.1;Parent=FBgn0053988.1.mrna2;Target=FBgn0053988.1 315 320 +
Chr2	stalkie_big_nohaplotig	exon	59019437	59019445	100	+	.	ID=FBgn0053988.1.mrna2.exon3;Name=FBgn0053988.1;Parent=FBgn0053988.1.mrna2;Target=FBgn0053988.1 339 347 +
Chr2	stalkie_big_nohaplotig	exon	59046976	59047549	100	+	.	ID=FBgn0053988.1.mrna2.exon5;Name=FBgn0053988.1;Parent=FBgn0053988.1.mrna2;Target=FBgn0053988.1 368 941 +
Chr2	stalkie_big_nohaplotig	exon	59049588	59049745	100	+	.	ID=FBgn0053988.1.mrna2.exon6;Name=FBgn0053988.1;Parent=FBgn0053988.1.mrna2;Target=FBgn0053988.1 942 1099 +
Chr2	stalkie_big_nohaplotig	exon	59049833	59051013	99	+	.	ID=FBgn0053988.1.mrna2.exon7;Name=FBgn0053988.1;Parent=FBgn0053988.1.mrna2;Target=FBgn0053988.1 1100 2280 +
Chr2	stalkie_big_nohaplotig	CDS	59012816	59012821	100	+	2	ID=FBgn0053988.1.mrna2.cds1;Name=FBgn0053988.1;Parent=FBgn0053988.1.mrna2;Target=FBgn0053988.1 315 320 +
Chr2	stalkie_big_nohaplotig	CDS	59019437	59019445	100	+	2	ID=FBgn0053988.1.mrna2.cds3;Name=FBgn0053988.1;Parent=FBgn0053988.1.mrna2;Target=FBgn0053988.1 339 347 +
Chr2	stalkie_big_nohaplotig	CDS	59046976	59047549	100	+	1	ID=FBgn0053988.1.mrna2.cds5;Name=FBgn0053988.1;Parent=FBgn0053988.1.mrna2;Target=FBgn0053988.1 368 941 +
Chr2	stalkie_big_nohaplotig	CDS	59049588	59049745	100	+	2	ID=FBgn0053988.1.mrna2.cds6;Name=FBgn0053988.1;Parent=FBgn0053988.1.mrna2;Target=FBgn0053988.1 942 1099 +
Chr2	stalkie_big_nohaplotig	CDS	59049833	59051013	99	+	1	ID=FBgn0053988.1.mrna2.cds7;Name=FBgn0053988.1;Parent=FBgn0053988.1.mrna2;Target=FBgn0053988.1 1100 2280 +
Chr2	stalkie_big_nohaplotig	mRNA	136402961	136405130	.	+	.	ID=FBgn0037750.1.mrna1;Name=FBgn0037750.1;Parent=FBgn0037750.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=1823;mismatches=12;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	136402961	136403194	100	+	.	ID=FBgn0037750.1.mrna1.exon1;Name=FBgn0037750.1;Parent=FBgn0037750.1.mrna1;Target=FBgn0037750.1 1 234 +
Chr2	stalkie_big_nohaplotig	exon	136403263	136403811	99	+	.	ID=FBgn0037750.1.mrna1.exon2;Name=FBgn0037750.1;Parent=FBgn0037750.1.mrna1;Target=FBgn0037750.1 235 783 +
Chr2	stalkie_big_nohaplotig	exon	136404013	136404981	99	+	.	ID=FBgn0037750.1.mrna1.exon3;Name=FBgn0037750.1;Parent=FBgn0037750.1.mrna1;Target=FBgn0037750.1 784 1752 +
Chr2	stalkie_big_nohaplotig	exon	136405048	136405130	98	+	.	ID=FBgn0037750.1.mrna1.exon4;Name=FBgn0037750.1;Parent=FBgn0037750.1.mrna1;Target=FBgn0037750.1 1753 1836 +
Chr2	stalkie_big_nohaplotig	CDS	136402961	136403194	100	+	0	ID=FBgn0037750.1.mrna1.cds1;Name=FBgn0037750.1;Parent=FBgn0037750.1.mrna1;Target=FBgn0037750.1 1 234 +
Chr2	stalkie_big_nohaplotig	CDS	136403263	136403811	99	+	0	ID=FBgn0037750.1.mrna1.cds2;Name=FBgn0037750.1;Parent=FBgn0037750.1.mrna1;Target=FBgn0037750.1 235 783 +
Chr2	stalkie_big_nohaplotig	CDS	136404013	136404981	99	+	0	ID=FBgn0037750.1.mrna1.cds3;Name=FBgn0037750.1;Parent=FBgn0037750.1.mrna1;Target=FBgn0037750.1 784 1752 +
Chr2	stalkie_big_nohaplotig	CDS	136405048	136405130	98	+	0	ID=FBgn0037750.1.mrna1.cds4;Name=FBgn0037750.1;Parent=FBgn0037750.1.mrna1;Target=FBgn0037750.1 1753 1836 +
Chr1	stalkie_big_nohaplotig	mRNA	126113583	126115523	.	-	.	ID=FBgn0052669.1.mrna1;Name=FBgn0052669.1;Parent=FBgn0052669.1.path1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1934;mismatches=7;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	126113583	126115523	99	-	.	ID=FBgn0052669.1.mrna1.exon1;Name=FBgn0052669.1;Parent=FBgn0052669.1.mrna1;Target=FBgn0052669.1 1941 1 .
Chr1	stalkie_big_nohaplotig	CDS	126113583	126115523	99	-	0	ID=FBgn0052669.1.mrna1.cds1;Name=FBgn0052669.1;Parent=FBgn0052669.1.mrna1;Target=FBgn0052669.1 1941 1 .
Chr1	stalkie_big_nohaplotig	mRNA	129066613	129075611	.	+	.	ID=FBgn0030369.1.mrna1;Name=FBgn0030369.1;Parent=FBgn0030369.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=1436;mismatches=10;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	129066613	129066634	100	+	.	ID=FBgn0030369.1.mrna1.exon1;Name=FBgn0030369.1;Parent=FBgn0030369.1.mrna1;Target=FBgn0030369.1 1 22 +
Chr1	stalkie_big_nohaplotig	exon	129066692	129066907	100	+	.	ID=FBgn0030369.1.mrna1.exon2;Name=FBgn0030369.1;Parent=FBgn0030369.1.mrna1;Target=FBgn0030369.1 23 238 +
Chr1	stalkie_big_nohaplotig	exon	129067003	129067194	100	+	.	ID=FBgn0030369.1.mrna1.exon3;Name=FBgn0030369.1;Parent=FBgn0030369.1.mrna1;Target=FBgn0030369.1 239 430 +
Chr1	stalkie_big_nohaplotig	exon	129070686	129070880	100	+	.	ID=FBgn0030369.1.mrna1.exon4;Name=FBgn0030369.1;Parent=FBgn0030369.1.mrna1;Target=FBgn0030369.1 431 625 +
Chr1	stalkie_big_nohaplotig	exon	129072203	129072272	98	+	.	ID=FBgn0030369.1.mrna1.exon5;Name=FBgn0030369.1;Parent=FBgn0030369.1.mrna1;Target=FBgn0030369.1 626 695 +
Chr1	stalkie_big_nohaplotig	exon	129072349	129072481	98	+	.	ID=FBgn0030369.1.mrna1.exon6;Name=FBgn0030369.1;Parent=FBgn0030369.1.mrna1;Target=FBgn0030369.1 696 828 +
Chr1	stalkie_big_nohaplotig	exon	129072688	129072939	98	+	.	ID=FBgn0030369.1.mrna1.exon7;Name=FBgn0030369.1;Parent=FBgn0030369.1.mrna1;Target=FBgn0030369.1 829 1080 +
Chr1	stalkie_big_nohaplotig	exon	129075246	129075611	98	+	.	ID=FBgn0030369.1.mrna1.exon8;Name=FBgn0030369.1;Parent=FBgn0030369.1.mrna1;Target=FBgn0030369.1 1081 1446 +
Chr1	stalkie_big_nohaplotig	CDS	129066613	129066634	100	+	0	ID=FBgn0030369.1.mrna1.cds1;Name=FBgn0030369.1;Parent=FBgn0030369.1.mrna1;Target=FBgn0030369.1 1 22 +
Chr1	stalkie_big_nohaplotig	CDS	129066692	129066907	100	+	1	ID=FBgn0030369.1.mrna1.cds2;Name=FBgn0030369.1;Parent=FBgn0030369.1.mrna1;Target=FBgn0030369.1 23 238 +
Chr1	stalkie_big_nohaplotig	CDS	129067003	129067194	100	+	1	ID=FBgn0030369.1.mrna1.cds3;Name=FBgn0030369.1;Parent=FBgn0030369.1.mrna1;Target=FBgn0030369.1 239 430 +
Chr1	stalkie_big_nohaplotig	CDS	129070686	129070880	100	+	1	ID=FBgn0030369.1.mrna1.cds4;Name=FBgn0030369.1;Parent=FBgn0030369.1.mrna1;Target=FBgn0030369.1 431 625 +
Chr1	stalkie_big_nohaplotig	CDS	129072203	129072272	98	+	1	ID=FBgn0030369.1.mrna1.cds5;Name=FBgn0030369.1;Parent=FBgn0030369.1.mrna1;Target=FBgn0030369.1 626 695 +
Chr1	stalkie_big_nohaplotig	CDS	129072349	129072481	98	+	2	ID=FBgn0030369.1.mrna1.cds6;Name=FBgn0030369.1;Parent=FBgn0030369.1.mrna1;Target=FBgn0030369.1 696 828 +
Chr1	stalkie_big_nohaplotig	CDS	129072688	129072939	98	+	0	ID=FBgn0030369.1.mrna1.cds7;Name=FBgn0030369.1;Parent=FBgn0030369.1.mrna1;Target=FBgn0030369.1 829 1080 +
Chr1	stalkie_big_nohaplotig	CDS	129075246	129075611	98	+	0	ID=FBgn0030369.1.mrna1.cds8;Name=FBgn0030369.1;Parent=FBgn0030369.1.mrna1;Target=FBgn0030369.1 1081 1446 +
Chr1	stalkie_big_nohaplotig	mRNA	172227178	172229050	.	-	.	ID=ORF174.mrna1;Name=ORF174;Parent=ORF174.path1;Dir=indeterminatecoverage=70.2;identity=96.7;matches=1811;mismatches=62;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	172227178	172229050	96	-	.	ID=ORF174.mrna1.exon1;Name=ORF174;Parent=ORF174.mrna1;Target=ORF174 1873 1 .
Chr1	stalkie_big_nohaplotig	CDS	172227179	172229050	96	-	0	ID=ORF174.mrna1.cds1;Name=ORF174;Parent=ORF174.mrna1;Target=ORF174 1872 1 .
Chr1	stalkie_big_nohaplotig	mRNA	171019668	171021026	.	+	.	ID=FBgn0052755.1.mrna1;Name=FBgn0052755.1;Parent=FBgn0052755.1.path1;Dir=sensecoverage=100.0;identity=98.7;matches=930;mismatches=12;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	171019668	171019758	95	+	.	ID=FBgn0052755.1.mrna1.exon1;Name=FBgn0052755.1;Parent=FBgn0052755.1.mrna1;Target=FBgn0052755.1 1 91 +
Chr1	stalkie_big_nohaplotig	exon	171020044	171020221	99	+	.	ID=FBgn0052755.1.mrna1.exon2;Name=FBgn0052755.1;Parent=FBgn0052755.1.mrna1;Target=FBgn0052755.1 92 269 +
Chr1	stalkie_big_nohaplotig	exon	171020282	171020567	99	+	.	ID=FBgn0052755.1.mrna1.exon3;Name=FBgn0052755.1;Parent=FBgn0052755.1.mrna1;Target=FBgn0052755.1 270 555 +
Chr1	stalkie_big_nohaplotig	exon	171020640	171021026	98	+	.	ID=FBgn0052755.1.mrna1.exon4;Name=FBgn0052755.1;Parent=FBgn0052755.1.mrna1;Target=FBgn0052755.1 556 942 +
Chr1	stalkie_big_nohaplotig	CDS	171019668	171019758	95	+	0	ID=FBgn0052755.1.mrna1.cds1;Name=FBgn0052755.1;Parent=FBgn0052755.1.mrna1;Target=FBgn0052755.1 1 91 +
Chr1	stalkie_big_nohaplotig	CDS	171020044	171020221	99	+	1	ID=FBgn0052755.1.mrna1.cds2;Name=FBgn0052755.1;Parent=FBgn0052755.1.mrna1;Target=FBgn0052755.1 92 269 +
Chr1	stalkie_big_nohaplotig	CDS	171020282	171020567	99	+	2	ID=FBgn0052755.1.mrna1.cds3;Name=FBgn0052755.1;Parent=FBgn0052755.1.mrna1;Target=FBgn0052755.1 270 555 +
Chr1	stalkie_big_nohaplotig	CDS	171020640	171021026	98	+	0	ID=FBgn0052755.1.mrna1.cds4;Name=FBgn0052755.1;Parent=FBgn0052755.1.mrna1;Target=FBgn0052755.1 556 942 +
Chr1	stalkie_big_nohaplotig	mRNA	35972337	35973694	.	+	.	ID=FBgn0259243.1.mrna2;Name=FBgn0259243.1;Parent=FBgn0259243.1.path2;Dir=sensecoverage=84.8;identity=100.0;matches=957;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	35972337	35972696	100	+	.	ID=FBgn0259243.1.mrna2.exon1;Name=FBgn0259243.1;Parent=FBgn0259243.1.mrna2;Target=FBgn0259243.1 172 531 +
Chr1	stalkie_big_nohaplotig	exon	35972769	35972988	100	+	.	ID=FBgn0259243.1.mrna2.exon2;Name=FBgn0259243.1;Parent=FBgn0259243.1.mrna2;Target=FBgn0259243.1 532 751 +
Chr1	stalkie_big_nohaplotig	exon	35973091	35973245	100	+	.	ID=FBgn0259243.1.mrna2.exon3;Name=FBgn0259243.1;Parent=FBgn0259243.1.mrna2;Target=FBgn0259243.1 752 906 +
Chr1	stalkie_big_nohaplotig	exon	35973322	35973461	100	+	.	ID=FBgn0259243.1.mrna2.exon4;Name=FBgn0259243.1;Parent=FBgn0259243.1.mrna2;Target=FBgn0259243.1 907 1046 +
Chr1	stalkie_big_nohaplotig	exon	35973613	35973694	100	+	.	ID=FBgn0259243.1.mrna2.exon5;Name=FBgn0259243.1;Parent=FBgn0259243.1.mrna2;Target=FBgn0259243.1 1047 1128 +
Chr1	stalkie_big_nohaplotig	CDS	35972337	35972696	100	+	0	ID=FBgn0259243.1.mrna2.cds1;Name=FBgn0259243.1;Parent=FBgn0259243.1.mrna2;Target=FBgn0259243.1 172 531 +
Chr1	stalkie_big_nohaplotig	CDS	35972769	35972988	100	+	0	ID=FBgn0259243.1.mrna2.cds2;Name=FBgn0259243.1;Parent=FBgn0259243.1.mrna2;Target=FBgn0259243.1 532 751 +
Chr1	stalkie_big_nohaplotig	CDS	35973091	35973245	100	+	1	ID=FBgn0259243.1.mrna2.cds3;Name=FBgn0259243.1;Parent=FBgn0259243.1.mrna2;Target=FBgn0259243.1 752 906 +
Chr1	stalkie_big_nohaplotig	CDS	35973322	35973461	100	+	0	ID=FBgn0259243.1.mrna2.cds4;Name=FBgn0259243.1;Parent=FBgn0259243.1.mrna2;Target=FBgn0259243.1 907 1046 +
Chr1	stalkie_big_nohaplotig	CDS	35973613	35973694	100	+	2	ID=FBgn0259243.1.mrna2.cds5;Name=FBgn0259243.1;Parent=FBgn0259243.1.mrna2;Target=FBgn0259243.1 1047 1128 +
Chr1	stalkie_big_nohaplotig	mRNA	44527257	44528908	.	-	.	ID=ORF562.mrna1;Name=ORF562;Parent=ORF562.path1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=1639;mismatches=13;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	44527257	44528908	99	-	.	ID=ORF562.mrna1.exon1;Name=ORF562;Parent=ORF562.mrna1;Target=ORF562 1653 1 .
Chr1	stalkie_big_nohaplotig	CDS	44528806	44528906	98	-	0	ID=ORF562.mrna1.cds1;Name=ORF562;Parent=ORF562.mrna1;Target=ORF562 104 3 .
Chr1	stalkie_big_nohaplotig	mRNA	131101456	131102307	.	-	.	ID=ORF2487.mrna1;Name=ORF2487;Parent=ORF2487.path1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=840;mismatches=12;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	131101456	131102307	98	-	.	ID=ORF2487.mrna1.exon1;Name=ORF2487;Parent=ORF2487.mrna1;Target=ORF2487 852 1 .
Chr1	stalkie_big_nohaplotig	CDS	131101456	131102307	98	-	0	ID=ORF2487.mrna1.cds1;Name=ORF2487;Parent=ORF2487.mrna1;Target=ORF2487 852 1 .
Chr1	stalkie_big_nohaplotig	mRNA	149425081	149426406	.	+	.	ID=FBgn0030700.1.mrna1;Name=FBgn0030700.1;Parent=FBgn0030700.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1111;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	149425081	149425162	100	+	.	ID=FBgn0030700.1.mrna1.exon1;Name=FBgn0030700.1;Parent=FBgn0030700.1.mrna1;Target=FBgn0030700.1 1 82 +
Chr1	stalkie_big_nohaplotig	exon	149425220	149425502	98	+	.	ID=FBgn0030700.1.mrna1.exon2;Name=FBgn0030700.1;Parent=FBgn0030700.1.mrna1;Target=FBgn0030700.1 83 365 +
Chr1	stalkie_big_nohaplotig	exon	149425593	149426105	99	+	.	ID=FBgn0030700.1.mrna1.exon3;Name=FBgn0030700.1;Parent=FBgn0030700.1.mrna1;Target=FBgn0030700.1 366 878 +
Chr1	stalkie_big_nohaplotig	exon	149426169	149426406	99	+	.	ID=FBgn0030700.1.mrna1.exon4;Name=FBgn0030700.1;Parent=FBgn0030700.1.mrna1;Target=FBgn0030700.1 879 1116 +
Chr1	stalkie_big_nohaplotig	CDS	149425081	149425162	100	+	0	ID=FBgn0030700.1.mrna1.cds1;Name=FBgn0030700.1;Parent=FBgn0030700.1.mrna1;Target=FBgn0030700.1 1 82 +
Chr1	stalkie_big_nohaplotig	CDS	149425220	149425502	98	+	1	ID=FBgn0030700.1.mrna1.cds2;Name=FBgn0030700.1;Parent=FBgn0030700.1.mrna1;Target=FBgn0030700.1 83 365 +
Chr1	stalkie_big_nohaplotig	CDS	149425593	149426105	99	+	2	ID=FBgn0030700.1.mrna1.cds3;Name=FBgn0030700.1;Parent=FBgn0030700.1.mrna1;Target=FBgn0030700.1 366 878 +
Chr1	stalkie_big_nohaplotig	CDS	149426169	149426406	99	+	2	ID=FBgn0030700.1.mrna1.cds4;Name=FBgn0030700.1;Parent=FBgn0030700.1.mrna1;Target=FBgn0030700.1 879 1116 +
Chr1	stalkie_big_nohaplotig	mRNA	165149317	165159446	.	-	.	ID=FBgn0028961.1.mrna1;Name=FBgn0028961.1;Parent=FBgn0028961.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1189;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	165159140	165159446	99	-	.	ID=FBgn0028961.1.mrna1.exon1;Name=FBgn0028961.1;Parent=FBgn0028961.1.mrna1;Target=FBgn0028961.1 1 307 +
Chr1	stalkie_big_nohaplotig	exon	165152796	165153081	99	-	.	ID=FBgn0028961.1.mrna1.exon2;Name=FBgn0028961.1;Parent=FBgn0028961.1.mrna1;Target=FBgn0028961.1 308 593 +
Chr1	stalkie_big_nohaplotig	exon	165152484	165152634	100	-	.	ID=FBgn0028961.1.mrna1.exon3;Name=FBgn0028961.1;Parent=FBgn0028961.1.mrna1;Target=FBgn0028961.1 594 744 +
Chr1	stalkie_big_nohaplotig	exon	165150413	165150531	98	-	.	ID=FBgn0028961.1.mrna1.exon4;Name=FBgn0028961.1;Parent=FBgn0028961.1.mrna1;Target=FBgn0028961.1 745 863 +
Chr1	stalkie_big_nohaplotig	exon	165150276	165150351	100	-	.	ID=FBgn0028961.1.mrna1.exon5;Name=FBgn0028961.1;Parent=FBgn0028961.1.mrna1;Target=FBgn0028961.1 864 939 +
Chr1	stalkie_big_nohaplotig	exon	165149471	165149626	100	-	.	ID=FBgn0028961.1.mrna1.exon6;Name=FBgn0028961.1;Parent=FBgn0028961.1.mrna1;Target=FBgn0028961.1 940 1095 +
Chr1	stalkie_big_nohaplotig	exon	165149317	165149415	100	-	.	ID=FBgn0028961.1.mrna1.exon7;Name=FBgn0028961.1;Parent=FBgn0028961.1.mrna1;Target=FBgn0028961.1 1096 1194 +
Chr1	stalkie_big_nohaplotig	CDS	165159140	165159446	99	-	0	ID=FBgn0028961.1.mrna1.cds1;Name=FBgn0028961.1;Parent=FBgn0028961.1.mrna1;Target=FBgn0028961.1 1 307 +
Chr1	stalkie_big_nohaplotig	CDS	165152796	165153081	99	-	1	ID=FBgn0028961.1.mrna1.cds2;Name=FBgn0028961.1;Parent=FBgn0028961.1.mrna1;Target=FBgn0028961.1 308 593 +
Chr1	stalkie_big_nohaplotig	CDS	165152484	165152634	100	-	2	ID=FBgn0028961.1.mrna1.cds3;Name=FBgn0028961.1;Parent=FBgn0028961.1.mrna1;Target=FBgn0028961.1 594 744 +
Chr1	stalkie_big_nohaplotig	CDS	165150413	165150531	98	-	0	ID=FBgn0028961.1.mrna1.cds4;Name=FBgn0028961.1;Parent=FBgn0028961.1.mrna1;Target=FBgn0028961.1 745 863 +
Chr1	stalkie_big_nohaplotig	CDS	165150276	165150351	100	-	2	ID=FBgn0028961.1.mrna1.cds5;Name=FBgn0028961.1;Parent=FBgn0028961.1.mrna1;Target=FBgn0028961.1 864 939 +
Chr1	stalkie_big_nohaplotig	CDS	165149471	165149626	100	-	0	ID=FBgn0028961.1.mrna1.cds6;Name=FBgn0028961.1;Parent=FBgn0028961.1.mrna1;Target=FBgn0028961.1 940 1095 +
Chr1	stalkie_big_nohaplotig	CDS	165149317	165149415	100	-	0	ID=FBgn0028961.1.mrna1.cds7;Name=FBgn0028961.1;Parent=FBgn0028961.1.mrna1;Target=FBgn0028961.1 1096 1194 +
Chr2	stalkie_big_nohaplotig	mRNA	14103139	14110530	.	-	.	ID=FBgn0039994.1.mrna1;Name=FBgn0039994.1;Parent=FBgn0039994.1.path1;Dir=sensecoverage=100.0;identity=99.4;matches=2027;mismatches=13;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	14110368	14110530	99	-	.	ID=FBgn0039994.1.mrna1.exon1;Name=FBgn0039994.1;Parent=FBgn0039994.1.mrna1;Target=FBgn0039994.1 1 163 +
Chr2	stalkie_big_nohaplotig	exon	14110234	14110301	100	-	.	ID=FBgn0039994.1.mrna1.exon2;Name=FBgn0039994.1;Parent=FBgn0039994.1.mrna1;Target=FBgn0039994.1 164 231 +
Chr2	stalkie_big_nohaplotig	exon	14106279	14106449	100	-	.	ID=FBgn0039994.1.mrna1.exon3;Name=FBgn0039994.1;Parent=FBgn0039994.1.mrna1;Target=FBgn0039994.1 232 402 +
Chr2	stalkie_big_nohaplotig	exon	14106110	14106195	98	-	.	ID=FBgn0039994.1.mrna1.exon4;Name=FBgn0039994.1;Parent=FBgn0039994.1.mrna1;Target=FBgn0039994.1 403 488 +
Chr2	stalkie_big_nohaplotig	exon	14105732	14106007	99	-	.	ID=FBgn0039994.1.mrna1.exon5;Name=FBgn0039994.1;Parent=FBgn0039994.1.mrna1;Target=FBgn0039994.1 489 764 +
Chr2	stalkie_big_nohaplotig	exon	14104367	14104616	98	-	.	ID=FBgn0039994.1.mrna1.exon6;Name=FBgn0039994.1;Parent=FBgn0039994.1.mrna1;Target=FBgn0039994.1 765 1014 +
Chr2	stalkie_big_nohaplotig	exon	14103948	14104292	98	-	.	ID=FBgn0039994.1.mrna1.exon7;Name=FBgn0039994.1;Parent=FBgn0039994.1.mrna1;Target=FBgn0039994.1 1015 1359 +
Chr2	stalkie_big_nohaplotig	exon	14103366	14103884	99	-	.	ID=FBgn0039994.1.mrna1.exon8;Name=FBgn0039994.1;Parent=FBgn0039994.1.mrna1;Target=FBgn0039994.1 1360 1878 +
Chr2	stalkie_big_nohaplotig	exon	14103139	14103300	100	-	.	ID=FBgn0039994.1.mrna1.exon9;Name=FBgn0039994.1;Parent=FBgn0039994.1.mrna1;Target=FBgn0039994.1 1879 2040 +
Chr2	stalkie_big_nohaplotig	CDS	14110368	14110530	99	-	0	ID=FBgn0039994.1.mrna1.cds1;Name=FBgn0039994.1;Parent=FBgn0039994.1.mrna1;Target=FBgn0039994.1 1 163 +
Chr2	stalkie_big_nohaplotig	CDS	14110234	14110301	100	-	1	ID=FBgn0039994.1.mrna1.cds2;Name=FBgn0039994.1;Parent=FBgn0039994.1.mrna1;Target=FBgn0039994.1 164 231 +
Chr2	stalkie_big_nohaplotig	CDS	14106279	14106449	100	-	0	ID=FBgn0039994.1.mrna1.cds3;Name=FBgn0039994.1;Parent=FBgn0039994.1.mrna1;Target=FBgn0039994.1 232 402 +
Chr2	stalkie_big_nohaplotig	CDS	14106110	14106195	98	-	0	ID=FBgn0039994.1.mrna1.cds4;Name=FBgn0039994.1;Parent=FBgn0039994.1.mrna1;Target=FBgn0039994.1 403 488 +
Chr2	stalkie_big_nohaplotig	CDS	14105732	14106007	99	-	2	ID=FBgn0039994.1.mrna1.cds5;Name=FBgn0039994.1;Parent=FBgn0039994.1.mrna1;Target=FBgn0039994.1 489 764 +
Chr2	stalkie_big_nohaplotig	CDS	14104367	14104616	98	-	2	ID=FBgn0039994.1.mrna1.cds6;Name=FBgn0039994.1;Parent=FBgn0039994.1.mrna1;Target=FBgn0039994.1 765 1014 +
Chr2	stalkie_big_nohaplotig	CDS	14103948	14104292	98	-	0	ID=FBgn0039994.1.mrna1.cds7;Name=FBgn0039994.1;Parent=FBgn0039994.1.mrna1;Target=FBgn0039994.1 1015 1359 +
Chr2	stalkie_big_nohaplotig	CDS	14103366	14103884	99	-	0	ID=FBgn0039994.1.mrna1.cds8;Name=FBgn0039994.1;Parent=FBgn0039994.1.mrna1;Target=FBgn0039994.1 1360 1878 +
Chr2	stalkie_big_nohaplotig	CDS	14103139	14103300	100	-	0	ID=FBgn0039994.1.mrna1.cds9;Name=FBgn0039994.1;Parent=FBgn0039994.1.mrna1;Target=FBgn0039994.1 1879 2040 +
Chr2	stalkie_big_nohaplotig	mRNA	45742069	45742548	.	+	.	ID=ORF1070.mrna1;Name=ORF1070;Parent=ORF1070.path1;Dir=indeterminatecoverage=38.4;identity=95.2;matches=457;mismatches=23;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	45742069	45742548	95	+	.	ID=ORF1070.mrna1.exon1;Name=ORF1070;Parent=ORF1070.mrna1;Target=ORF1070 1041 562 .
Chr2	stalkie_big_nohaplotig	CDS	45742069	45742548	95	+	0	ID=ORF1070.mrna1.cds1;Name=ORF1070;Parent=ORF1070.mrna1;Target=ORF1070 1041 562 .
Chr2	stalkie_big_nohaplotig	mRNA	75065213	75067234	.	+	.	ID=FBgn0003011.1.mrna1;Name=FBgn0003011.1;Parent=FBgn0003011.1.path1;Dir=sensecoverage=81.4;identity=100.0;matches=1197;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	75065213	75065261	100	+	.	ID=FBgn0003011.1.mrna1.exon1;Name=FBgn0003011.1;Parent=FBgn0003011.1.mrna1;Target=FBgn0003011.1 1 49 +
Chr2	stalkie_big_nohaplotig	exon	75065701	75065773	100	+	.	ID=FBgn0003011.1.mrna1.exon2;Name=FBgn0003011.1;Parent=FBgn0003011.1.mrna1;Target=FBgn0003011.1 50 122 +
Chr2	stalkie_big_nohaplotig	exon	75065853	75066307	100	+	.	ID=FBgn0003011.1.mrna1.exon3;Name=FBgn0003011.1;Parent=FBgn0003011.1.mrna1;Target=FBgn0003011.1 123 577 +
Chr2	stalkie_big_nohaplotig	exon	75066615	75067234	100	+	.	ID=FBgn0003011.1.mrna1.exon4;Name=FBgn0003011.1;Parent=FBgn0003011.1.mrna1;Target=FBgn0003011.1 578 1197 +
Chr2	stalkie_big_nohaplotig	CDS	75065213	75065261	100	+	0	ID=FBgn0003011.1.mrna1.cds1;Name=FBgn0003011.1;Parent=FBgn0003011.1.mrna1;Target=FBgn0003011.1 1 49 +
Chr2	stalkie_big_nohaplotig	CDS	75065701	75065773	100	+	1	ID=FBgn0003011.1.mrna1.cds2;Name=FBgn0003011.1;Parent=FBgn0003011.1.mrna1;Target=FBgn0003011.1 50 122 +
Chr2	stalkie_big_nohaplotig	CDS	75065853	75066307	100	+	2	ID=FBgn0003011.1.mrna1.cds3;Name=FBgn0003011.1;Parent=FBgn0003011.1.mrna1;Target=FBgn0003011.1 123 577 +
Chr2	stalkie_big_nohaplotig	CDS	75066615	75067234	100	+	1	ID=FBgn0003011.1.mrna1.cds4;Name=FBgn0003011.1;Parent=FBgn0003011.1.mrna1;Target=FBgn0003011.1 578 1197 +
Chr1	stalkie_big_nohaplotig	mRNA	147362440	147367699	.	+	.	ID=FBgn0031016.1.mrna1;Name=FBgn0031016.1;Parent=FBgn0031016.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=2381;mismatches=10;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	147362440	147364066	99	+	.	ID=FBgn0031016.1.mrna1.exon1;Name=FBgn0031016.1;Parent=FBgn0031016.1.mrna1;Target=FBgn0031016.1 1 1627 +
Chr1	stalkie_big_nohaplotig	exon	147366936	147367699	99	+	.	ID=FBgn0031016.1.mrna1.exon2;Name=FBgn0031016.1;Parent=FBgn0031016.1.mrna1;Target=FBgn0031016.1 1628 2391 +
Chr1	stalkie_big_nohaplotig	CDS	147362440	147364066	99	+	0	ID=FBgn0031016.1.mrna1.cds1;Name=FBgn0031016.1;Parent=FBgn0031016.1.mrna1;Target=FBgn0031016.1 1 1627 +
Chr1	stalkie_big_nohaplotig	CDS	147366936	147367699	99	+	1	ID=FBgn0031016.1.mrna1.cds2;Name=FBgn0031016.1;Parent=FBgn0031016.1.mrna1;Target=FBgn0031016.1 1628 2391 +
Chr2	stalkie_big_nohaplotig	mRNA	37629639	37637723	.	-	.	ID=FBgn0263667.1.mrna1;Name=FBgn0263667.1;Parent=FBgn0263667.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=4580;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	37637121	37637723	100	-	.	ID=FBgn0263667.1.mrna1.exon1;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 2 604 +
Chr2	stalkie_big_nohaplotig	exon	37636928	37637047	100	-	.	ID=FBgn0263667.1.mrna1.exon2;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 605 724 +
Chr2	stalkie_big_nohaplotig	exon	37636685	37636854	100	-	.	ID=FBgn0263667.1.mrna1.exon3;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 725 894 +
Chr2	stalkie_big_nohaplotig	exon	37636342	37636532	100	-	.	ID=FBgn0263667.1.mrna1.exon4;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 895 1085 +
Chr2	stalkie_big_nohaplotig	exon	37634148	37636249	100	-	.	ID=FBgn0263667.1.mrna1.exon5;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 1086 3187 +
Chr2	stalkie_big_nohaplotig	exon	37633710	37633747	100	-	.	ID=FBgn0263667.1.mrna1.exon6;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 3188 3225 +
Chr2	stalkie_big_nohaplotig	exon	37632060	37632136	100	-	.	ID=FBgn0263667.1.mrna1.exon7;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 3226 3302 +
Chr2	stalkie_big_nohaplotig	exon	37631952	37631988	100	-	.	ID=FBgn0263667.1.mrna1.exon8;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 3303 3339 +
Chr2	stalkie_big_nohaplotig	exon	37631639	37631873	100	-	.	ID=FBgn0263667.1.mrna1.exon9;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 3340 3574 +
Chr2	stalkie_big_nohaplotig	exon	37631050	37631252	100	-	.	ID=FBgn0263667.1.mrna1.exon10;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 3575 3777 +
Chr2	stalkie_big_nohaplotig	exon	37630372	37630513	100	-	.	ID=FBgn0263667.1.mrna1.exon11;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 3778 3919 +
Chr2	stalkie_big_nohaplotig	exon	37629639	37630300	100	-	.	ID=FBgn0263667.1.mrna1.exon12;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 3920 4581 +
Chr2	stalkie_big_nohaplotig	CDS	37637121	37637721	100	-	0	ID=FBgn0263667.1.mrna1.cds1;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 4 604 +
Chr2	stalkie_big_nohaplotig	CDS	37636928	37637047	100	-	1	ID=FBgn0263667.1.mrna1.cds2;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 605 724 +
Chr2	stalkie_big_nohaplotig	CDS	37636685	37636854	100	-	1	ID=FBgn0263667.1.mrna1.cds3;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 725 894 +
Chr2	stalkie_big_nohaplotig	CDS	37636342	37636532	100	-	0	ID=FBgn0263667.1.mrna1.cds4;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 895 1085 +
Chr2	stalkie_big_nohaplotig	CDS	37634148	37636249	100	-	2	ID=FBgn0263667.1.mrna1.cds5;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 1086 3187 +
Chr2	stalkie_big_nohaplotig	CDS	37633710	37633747	100	-	1	ID=FBgn0263667.1.mrna1.cds6;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 3188 3225 +
Chr2	stalkie_big_nohaplotig	CDS	37632060	37632136	100	-	0	ID=FBgn0263667.1.mrna1.cds7;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 3226 3302 +
Chr2	stalkie_big_nohaplotig	CDS	37631952	37631988	100	-	2	ID=FBgn0263667.1.mrna1.cds8;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 3303 3339 +
Chr2	stalkie_big_nohaplotig	CDS	37631639	37631873	100	-	0	ID=FBgn0263667.1.mrna1.cds9;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 3340 3574 +
Chr2	stalkie_big_nohaplotig	CDS	37631050	37631252	100	-	1	ID=FBgn0263667.1.mrna1.cds10;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 3575 3777 +
Chr2	stalkie_big_nohaplotig	CDS	37630372	37630513	100	-	0	ID=FBgn0263667.1.mrna1.cds11;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 3778 3919 +
Chr2	stalkie_big_nohaplotig	CDS	37629639	37630300	100	-	1	ID=FBgn0263667.1.mrna1.cds12;Name=FBgn0263667.1;Parent=FBgn0263667.1.mrna1;Target=FBgn0263667.1 3920 4581 +
Chr1	stalkie_big_nohaplotig	mRNA	101235641	101236396	.	+	.	ID=ORF3219.mrna1;Name=ORF3219;Parent=ORF3219.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=756;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	101235641	101236396	100	+	.	ID=ORF3219.mrna1.exon1;Name=ORF3219;Parent=ORF3219.mrna1;Target=ORF3219 756 1 .
Chr1	stalkie_big_nohaplotig	CDS	101235641	101236396	100	+	0	ID=ORF3219.mrna1.cds1;Name=ORF3219;Parent=ORF3219.mrna1;Target=ORF3219 756 1 .
Chr2	stalkie_big_nohaplotig	mRNA	21694246	21695910	.	+	.	ID=FBgn0033079.1.mrna1;Name=FBgn0033079.1;Parent=FBgn0033079.1.path1;Dir=sensecoverage=100.0;identity=99.4;matches=1214;mismatches=7;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	21694246	21694394	100	+	.	ID=FBgn0033079.1.mrna1.exon1;Name=FBgn0033079.1;Parent=FBgn0033079.1.mrna1;Target=FBgn0033079.1 1 149 +
Chr2	stalkie_big_nohaplotig	exon	21694458	21694647	100	+	.	ID=FBgn0033079.1.mrna1.exon2;Name=FBgn0033079.1;Parent=FBgn0033079.1.mrna1;Target=FBgn0033079.1 150 339 +
Chr2	stalkie_big_nohaplotig	exon	21694708	21694879	100	+	.	ID=FBgn0033079.1.mrna1.exon3;Name=FBgn0033079.1;Parent=FBgn0033079.1.mrna1;Target=FBgn0033079.1 340 511 +
Chr2	stalkie_big_nohaplotig	exon	21695141	21695676	98	+	.	ID=FBgn0033079.1.mrna1.exon4;Name=FBgn0033079.1;Parent=FBgn0033079.1.mrna1;Target=FBgn0033079.1 512 1047 +
Chr2	stalkie_big_nohaplotig	exon	21695737	21695910	100	+	.	ID=FBgn0033079.1.mrna1.exon5;Name=FBgn0033079.1;Parent=FBgn0033079.1.mrna1;Target=FBgn0033079.1 1048 1221 +
Chr2	stalkie_big_nohaplotig	CDS	21694246	21694394	100	+	0	ID=FBgn0033079.1.mrna1.cds1;Name=FBgn0033079.1;Parent=FBgn0033079.1.mrna1;Target=FBgn0033079.1 1 149 +
Chr2	stalkie_big_nohaplotig	CDS	21694458	21694647	100	+	2	ID=FBgn0033079.1.mrna1.cds2;Name=FBgn0033079.1;Parent=FBgn0033079.1.mrna1;Target=FBgn0033079.1 150 339 +
Chr2	stalkie_big_nohaplotig	CDS	21694708	21694879	100	+	0	ID=FBgn0033079.1.mrna1.cds3;Name=FBgn0033079.1;Parent=FBgn0033079.1.mrna1;Target=FBgn0033079.1 340 511 +
Chr2	stalkie_big_nohaplotig	CDS	21695141	21695676	98	+	1	ID=FBgn0033079.1.mrna1.cds4;Name=FBgn0033079.1;Parent=FBgn0033079.1.mrna1;Target=FBgn0033079.1 512 1047 +
Chr2	stalkie_big_nohaplotig	CDS	21695737	21695910	100	+	0	ID=FBgn0033079.1.mrna1.cds5;Name=FBgn0033079.1;Parent=FBgn0033079.1.mrna1;Target=FBgn0033079.1 1048 1221 +
ChrX	stalkie_big_nohaplotig	mRNA	47133370	47134812	.	-	.	ID=FBgn0031878.2.mrna1;Name=FBgn0031878.2;Parent=FBgn0031878.2.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1209;mismatches=3;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	47134236	47134812	99	-	.	ID=FBgn0031878.2.mrna1.exon1;Name=FBgn0031878.2;Parent=FBgn0031878.2.mrna1;Target=FBgn0031878.2 1 577 +
ChrX	stalkie_big_nohaplotig	exon	47133714	47134069	100	-	.	ID=FBgn0031878.2.mrna1.exon2;Name=FBgn0031878.2;Parent=FBgn0031878.2.mrna1;Target=FBgn0031878.2 578 933 +
ChrX	stalkie_big_nohaplotig	exon	47133370	47133648	100	-	.	ID=FBgn0031878.2.mrna1.exon3;Name=FBgn0031878.2;Parent=FBgn0031878.2.mrna1;Target=FBgn0031878.2 934 1212 +
ChrX	stalkie_big_nohaplotig	CDS	47134236	47134812	99	-	0	ID=FBgn0031878.2.mrna1.cds1;Name=FBgn0031878.2;Parent=FBgn0031878.2.mrna1;Target=FBgn0031878.2 1 577 +
ChrX	stalkie_big_nohaplotig	CDS	47133714	47134069	100	-	1	ID=FBgn0031878.2.mrna1.cds2;Name=FBgn0031878.2;Parent=FBgn0031878.2.mrna1;Target=FBgn0031878.2 578 933 +
ChrX	stalkie_big_nohaplotig	CDS	47133370	47133648	100	-	0	ID=FBgn0031878.2.mrna1.cds3;Name=FBgn0031878.2;Parent=FBgn0031878.2.mrna1;Target=FBgn0031878.2 934 1212 +
ChrX	stalkie_big_nohaplotig	mRNA	47081941	47100681	.	-	.	ID=FBgn0051635.1.mrna1;Name=FBgn0051635.1;Parent=FBgn0051635.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=6296;mismatches=1;indels=6;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	47099808	47100681	99	-	.	ID=FBgn0051635.1.mrna1.exon1;Name=FBgn0051635.1;Parent=FBgn0051635.1.mrna1;Target=FBgn0051635.1 1 868 +
ChrX	stalkie_big_nohaplotig	exon	47093552	47093754	100	-	.	ID=FBgn0051635.1.mrna1.exon2;Name=FBgn0051635.1;Parent=FBgn0051635.1.mrna1;Target=FBgn0051635.1 869 1071 +
ChrX	stalkie_big_nohaplotig	exon	47092367	47092685	100	-	.	ID=FBgn0051635.1.mrna1.exon3;Name=FBgn0051635.1;Parent=FBgn0051635.1.mrna1;Target=FBgn0051635.1 1072 1390 +
ChrX	stalkie_big_nohaplotig	exon	47091347	47092312	100	-	.	ID=FBgn0051635.1.mrna1.exon4;Name=FBgn0051635.1;Parent=FBgn0051635.1.mrna1;Target=FBgn0051635.1 1391 2356 +
ChrX	stalkie_big_nohaplotig	exon	47089651	47091269	99	-	.	ID=FBgn0051635.1.mrna1.exon5;Name=FBgn0051635.1;Parent=FBgn0051635.1.mrna1;Target=FBgn0051635.1 2357 3975 +
ChrX	stalkie_big_nohaplotig	exon	47083901	47085473	100	-	.	ID=FBgn0051635.1.mrna1.exon6;Name=FBgn0051635.1;Parent=FBgn0051635.1.mrna1;Target=FBgn0051635.1 3976 5548 +
ChrX	stalkie_big_nohaplotig	exon	47081941	47082689	100	-	.	ID=FBgn0051635.1.mrna1.exon7;Name=FBgn0051635.1;Parent=FBgn0051635.1.mrna1;Target=FBgn0051635.1 5549 6297 +
ChrX	stalkie_big_nohaplotig	CDS	47099808	47100681	99	-	0	ID=FBgn0051635.1.mrna1.cds1;Name=FBgn0051635.1;Parent=FBgn0051635.1.mrna1;Target=FBgn0051635.1 1 868 +
ChrX	stalkie_big_nohaplotig	CDS	47093552	47093754	100	-	1	ID=FBgn0051635.1.mrna1.cds2;Name=FBgn0051635.1;Parent=FBgn0051635.1.mrna1;Target=FBgn0051635.1 869 1071 +
ChrX	stalkie_big_nohaplotig	CDS	47092367	47092685	100	-	0	ID=FBgn0051635.1.mrna1.cds3;Name=FBgn0051635.1;Parent=FBgn0051635.1.mrna1;Target=FBgn0051635.1 1072 1390 +
ChrX	stalkie_big_nohaplotig	CDS	47091347	47092312	100	-	1	ID=FBgn0051635.1.mrna1.cds4;Name=FBgn0051635.1;Parent=FBgn0051635.1.mrna1;Target=FBgn0051635.1 1391 2356 +
ChrX	stalkie_big_nohaplotig	CDS	47089651	47091269	99	-	1	ID=FBgn0051635.1.mrna1.cds5;Name=FBgn0051635.1;Parent=FBgn0051635.1.mrna1;Target=FBgn0051635.1 2357 3975 +
ChrX	stalkie_big_nohaplotig	CDS	47083901	47085473	100	-	0	ID=FBgn0051635.1.mrna1.cds6;Name=FBgn0051635.1;Parent=FBgn0051635.1.mrna1;Target=FBgn0051635.1 3976 5548 +
ChrX	stalkie_big_nohaplotig	CDS	47081941	47082689	100	-	1	ID=FBgn0051635.1.mrna1.cds7;Name=FBgn0051635.1;Parent=FBgn0051635.1.mrna1;Target=FBgn0051635.1 5549 6297 +
Chr2	stalkie_big_nohaplotig	mRNA	103763189	103763917	.	+	.	ID=FBgn0010313.mrna1;Name=FBgn0010313;Parent=FBgn0010313.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=729;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	103763189	103763917	100	+	.	ID=FBgn0010313.mrna1.exon1;Name=FBgn0010313;Parent=FBgn0010313.mrna1;Target=FBgn0010313 729 1 .
Chr2	stalkie_big_nohaplotig	CDS	103763189	103763917	100	+	0	ID=FBgn0010313.mrna1.cds1;Name=FBgn0010313;Parent=FBgn0010313.mrna1;Target=FBgn0010313 729 1 .
Chr1	stalkie_big_nohaplotig	mRNA	87667178	87668245	.	-	.	ID=FBgn0029892.1.mrna1;Name=FBgn0029892.1;Parent=FBgn0029892.1.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1068;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	87667178	87668245	100	-	.	ID=FBgn0029892.1.mrna1.exon1;Name=FBgn0029892.1;Parent=FBgn0029892.1.mrna1;Target=FBgn0029892.1 1068 1 .
Chr1	stalkie_big_nohaplotig	CDS	87667178	87668245	100	-	0	ID=FBgn0029892.1.mrna1.cds1;Name=FBgn0029892.1;Parent=FBgn0029892.1.mrna1;Target=FBgn0029892.1 1068 1 .
Chr1	stalkie_big_nohaplotig	mRNA	87597098	87609024	.	-	.	ID=FBgn0031030.1.mrna1;Name=FBgn0031030.1;Parent=FBgn0031030.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3011;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	87608792	87609024	100	-	.	ID=FBgn0031030.1.mrna1.exon1;Name=FBgn0031030.1;Parent=FBgn0031030.1.mrna1;Target=FBgn0031030.1 1 233 +
Chr1	stalkie_big_nohaplotig	exon	87608222	87608726	99	-	.	ID=FBgn0031030.1.mrna1.exon2;Name=FBgn0031030.1;Parent=FBgn0031030.1.mrna1;Target=FBgn0031030.1 234 738 +
Chr1	stalkie_big_nohaplotig	exon	87607792	87608148	100	-	.	ID=FBgn0031030.1.mrna1.exon3;Name=FBgn0031030.1;Parent=FBgn0031030.1.mrna1;Target=FBgn0031030.1 739 1095 +
Chr1	stalkie_big_nohaplotig	exon	87607216	87607719	100	-	.	ID=FBgn0031030.1.mrna1.exon4;Name=FBgn0031030.1;Parent=FBgn0031030.1.mrna1;Target=FBgn0031030.1 1096 1599 +
Chr1	stalkie_big_nohaplotig	exon	87598684	87599220	100	-	.	ID=FBgn0031030.1.mrna1.exon5;Name=FBgn0031030.1;Parent=FBgn0031030.1.mrna1;Target=FBgn0031030.1 1600 2136 +
Chr1	stalkie_big_nohaplotig	exon	87598483	87598605	100	-	.	ID=FBgn0031030.1.mrna1.exon6;Name=FBgn0031030.1;Parent=FBgn0031030.1.mrna1;Target=FBgn0031030.1 2137 2259 +
Chr1	stalkie_big_nohaplotig	exon	87598105	87598221	100	-	.	ID=FBgn0031030.1.mrna1.exon7;Name=FBgn0031030.1;Parent=FBgn0031030.1.mrna1;Target=FBgn0031030.1 2260 2376 +
Chr1	stalkie_big_nohaplotig	exon	87597843	87598016	100	-	.	ID=FBgn0031030.1.mrna1.exon8;Name=FBgn0031030.1;Parent=FBgn0031030.1.mrna1;Target=FBgn0031030.1 2377 2550 +
Chr1	stalkie_big_nohaplotig	exon	87597557	87597778	100	-	.	ID=FBgn0031030.1.mrna1.exon9;Name=FBgn0031030.1;Parent=FBgn0031030.1.mrna1;Target=FBgn0031030.1 2551 2772 +
Chr1	stalkie_big_nohaplotig	exon	87597279	87597397	100	-	.	ID=FBgn0031030.1.mrna1.exon10;Name=FBgn0031030.1;Parent=FBgn0031030.1.mrna1;Target=FBgn0031030.1 2773 2891 +
Chr1	stalkie_big_nohaplotig	exon	87597098	87597218	100	-	.	ID=FBgn0031030.1.mrna1.exon11;Name=FBgn0031030.1;Parent=FBgn0031030.1.mrna1;Target=FBgn0031030.1 2892 3012 +
Chr1	stalkie_big_nohaplotig	CDS	87608792	87609024	100	-	0	ID=FBgn0031030.1.mrna1.cds1;Name=FBgn0031030.1;Parent=FBgn0031030.1.mrna1;Target=FBgn0031030.1 1 233 +
Chr1	stalkie_big_nohaplotig	CDS	87608222	87608726	99	-	2	ID=FBgn0031030.1.mrna1.cds2;Name=FBgn0031030.1;Parent=FBgn0031030.1.mrna1;Target=FBgn0031030.1 234 738 +
Chr1	stalkie_big_nohaplotig	CDS	87607792	87608148	100	-	0	ID=FBgn0031030.1.mrna1.cds3;Name=FBgn0031030.1;Parent=FBgn0031030.1.mrna1;Target=FBgn0031030.1 739 1095 +
Chr1	stalkie_big_nohaplotig	CDS	87607216	87607719	100	-	0	ID=FBgn0031030.1.mrna1.cds4;Name=FBgn0031030.1;Parent=FBgn0031030.1.mrna1;Target=FBgn0031030.1 1096 1599 +
Chr1	stalkie_big_nohaplotig	CDS	87598684	87599220	100	-	0	ID=FBgn0031030.1.mrna1.cds5;Name=FBgn0031030.1;Parent=FBgn0031030.1.mrna1;Target=FBgn0031030.1 1600 2136 +
Chr1	stalkie_big_nohaplotig	CDS	87598483	87598605	100	-	0	ID=FBgn0031030.1.mrna1.cds6;Name=FBgn0031030.1;Parent=FBgn0031030.1.mrna1;Target=FBgn0031030.1 2137 2259 +
Chr1	stalkie_big_nohaplotig	CDS	87598105	87598221	100	-	0	ID=FBgn0031030.1.mrna1.cds7;Name=FBgn0031030.1;Parent=FBgn0031030.1.mrna1;Target=FBgn0031030.1 2260 2376 +
Chr1	stalkie_big_nohaplotig	CDS	87597843	87598016	100	-	0	ID=FBgn0031030.1.mrna1.cds8;Name=FBgn0031030.1;Parent=FBgn0031030.1.mrna1;Target=FBgn0031030.1 2377 2550 +
Chr1	stalkie_big_nohaplotig	CDS	87597557	87597778	100	-	0	ID=FBgn0031030.1.mrna1.cds9;Name=FBgn0031030.1;Parent=FBgn0031030.1.mrna1;Target=FBgn0031030.1 2551 2772 +
Chr1	stalkie_big_nohaplotig	CDS	87597279	87597397	100	-	0	ID=FBgn0031030.1.mrna1.cds10;Name=FBgn0031030.1;Parent=FBgn0031030.1.mrna1;Target=FBgn0031030.1 2773 2891 +
Chr1	stalkie_big_nohaplotig	CDS	87597098	87597218	100	-	2	ID=FBgn0031030.1.mrna1.cds11;Name=FBgn0031030.1;Parent=FBgn0031030.1.mrna1;Target=FBgn0031030.1 2892 3012 +
Chr2	stalkie_big_nohaplotig	mRNA	3833819	3835409	.	+	.	ID=FBgn0033978.5.mrna1;Name=FBgn0033978.5;Parent=FBgn0033978.5.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1528;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	3833819	3834929	99	+	.	ID=FBgn0033978.5.mrna1.exon1;Name=FBgn0033978.5;Parent=FBgn0033978.5.mrna1;Target=FBgn0033978.5 1 1111 +
Chr2	stalkie_big_nohaplotig	exon	3834988	3835409	100	+	.	ID=FBgn0033978.5.mrna1.exon2;Name=FBgn0033978.5;Parent=FBgn0033978.5.mrna1;Target=FBgn0033978.5 1112 1533 +
Chr2	stalkie_big_nohaplotig	CDS	3833819	3834929	99	+	0	ID=FBgn0033978.5.mrna1.cds1;Name=FBgn0033978.5;Parent=FBgn0033978.5.mrna1;Target=FBgn0033978.5 1 1111 +
Chr2	stalkie_big_nohaplotig	CDS	3834988	3835409	100	+	1	ID=FBgn0033978.5.mrna1.cds2;Name=FBgn0033978.5;Parent=FBgn0033978.5.mrna1;Target=FBgn0033978.5 1112 1533 +
Chr1	stalkie_big_nohaplotig	mRNA	125516856	125530415	.	+	.	ID=FBgn0000319.1.mrna1;Name=FBgn0000319.1;Parent=FBgn0000319.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=5030;mismatches=16;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	125516856	125516924	100	+	.	ID=FBgn0000319.1.mrna1.exon1;Name=FBgn0000319.1;Parent=FBgn0000319.1.mrna1;Target=FBgn0000319.1 1 69 +
Chr1	stalkie_big_nohaplotig	exon	125524838	125525045	100	+	.	ID=FBgn0000319.1.mrna1.exon2;Name=FBgn0000319.1;Parent=FBgn0000319.1.mrna1;Target=FBgn0000319.1 70 277 +
Chr1	stalkie_big_nohaplotig	exon	125525115	125525450	99	+	.	ID=FBgn0000319.1.mrna1.exon3;Name=FBgn0000319.1;Parent=FBgn0000319.1.mrna1;Target=FBgn0000319.1 278 613 +
Chr1	stalkie_big_nohaplotig	exon	125525520	125529485	99	+	.	ID=FBgn0000319.1.mrna1.exon4;Name=FBgn0000319.1;Parent=FBgn0000319.1.mrna1;Target=FBgn0000319.1 614 4579 +
Chr1	stalkie_big_nohaplotig	exon	125529805	125529971	100	+	.	ID=FBgn0000319.1.mrna1.exon5;Name=FBgn0000319.1;Parent=FBgn0000319.1.mrna1;Target=FBgn0000319.1 4580 4746 +
Chr1	stalkie_big_nohaplotig	exon	125530054	125530140	100	+	.	ID=FBgn0000319.1.mrna1.exon6;Name=FBgn0000319.1;Parent=FBgn0000319.1.mrna1;Target=FBgn0000319.1 4747 4833 +
Chr1	stalkie_big_nohaplotig	exon	125530203	125530415	100	+	.	ID=FBgn0000319.1.mrna1.exon7;Name=FBgn0000319.1;Parent=FBgn0000319.1.mrna1;Target=FBgn0000319.1 4834 5046 +
Chr1	stalkie_big_nohaplotig	CDS	125516856	125516924	100	+	0	ID=FBgn0000319.1.mrna1.cds1;Name=FBgn0000319.1;Parent=FBgn0000319.1.mrna1;Target=FBgn0000319.1 1 69 +
Chr1	stalkie_big_nohaplotig	CDS	125524838	125525045	100	+	0	ID=FBgn0000319.1.mrna1.cds2;Name=FBgn0000319.1;Parent=FBgn0000319.1.mrna1;Target=FBgn0000319.1 70 277 +
Chr1	stalkie_big_nohaplotig	CDS	125525115	125525450	99	+	1	ID=FBgn0000319.1.mrna1.cds3;Name=FBgn0000319.1;Parent=FBgn0000319.1.mrna1;Target=FBgn0000319.1 278 613 +
Chr1	stalkie_big_nohaplotig	CDS	125525520	125529485	99	+	1	ID=FBgn0000319.1.mrna1.cds4;Name=FBgn0000319.1;Parent=FBgn0000319.1.mrna1;Target=FBgn0000319.1 614 4579 +
Chr1	stalkie_big_nohaplotig	CDS	125529805	125529971	100	+	1	ID=FBgn0000319.1.mrna1.cds5;Name=FBgn0000319.1;Parent=FBgn0000319.1.mrna1;Target=FBgn0000319.1 4580 4746 +
Chr1	stalkie_big_nohaplotig	CDS	125530054	125530140	100	+	0	ID=FBgn0000319.1.mrna1.cds6;Name=FBgn0000319.1;Parent=FBgn0000319.1.mrna1;Target=FBgn0000319.1 4747 4833 +
Chr1	stalkie_big_nohaplotig	CDS	125530203	125530415	100	+	0	ID=FBgn0000319.1.mrna1.cds7;Name=FBgn0000319.1;Parent=FBgn0000319.1.mrna1;Target=FBgn0000319.1 4834 5046 +
Chr1	stalkie_big_nohaplotig	mRNA	125477667	125500548	.	-	.	ID=FBgn0003392.1.mrna1;Name=FBgn0003392.1;Parent=FBgn0003392.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=2648;mismatches=7;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	125500385	125500548	100	-	.	ID=FBgn0003392.1.mrna1.exon1;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 1 164 +
Chr1	stalkie_big_nohaplotig	exon	125493553	125493626	100	-	.	ID=FBgn0003392.1.mrna1.exon2;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 165 238 +
Chr1	stalkie_big_nohaplotig	exon	125492727	125493483	99	-	.	ID=FBgn0003392.1.mrna1.exon3;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 239 995 +
Chr1	stalkie_big_nohaplotig	exon	125492541	125492657	100	-	.	ID=FBgn0003392.1.mrna1.exon4;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 996 1112 +
Chr1	stalkie_big_nohaplotig	exon	125492240	125492468	99	-	.	ID=FBgn0003392.1.mrna1.exon5;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 1113 1341 +
Chr1	stalkie_big_nohaplotig	exon	125492002	125492159	100	-	.	ID=FBgn0003392.1.mrna1.exon6;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 1342 1499 +
Chr1	stalkie_big_nohaplotig	exon	125491828	125491934	99	-	.	ID=FBgn0003392.1.mrna1.exon7;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 1500 1606 +
Chr1	stalkie_big_nohaplotig	exon	125489489	125489682	99	-	.	ID=FBgn0003392.1.mrna1.exon8;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 1607 1800 +
Chr1	stalkie_big_nohaplotig	exon	125488641	125488760	100	-	.	ID=FBgn0003392.1.mrna1.exon9;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 1801 1920 +
Chr1	stalkie_big_nohaplotig	exon	125483275	125483478	100	-	.	ID=FBgn0003392.1.mrna1.exon10;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 1921 2124 +
Chr1	stalkie_big_nohaplotig	exon	125483119	125483212	100	-	.	ID=FBgn0003392.1.mrna1.exon11;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 2125 2218 +
Chr1	stalkie_big_nohaplotig	exon	125482587	125482723	100	-	.	ID=FBgn0003392.1.mrna1.exon12;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 2219 2355 +
Chr1	stalkie_big_nohaplotig	exon	125482322	125482473	98	-	.	ID=FBgn0003392.1.mrna1.exon13;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 2356 2507 +
Chr1	stalkie_big_nohaplotig	exon	125477667	125477814	100	-	.	ID=FBgn0003392.1.mrna1.exon14;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 2508 2655 +
Chr1	stalkie_big_nohaplotig	CDS	125500385	125500548	100	-	0	ID=FBgn0003392.1.mrna1.cds1;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 1 164 +
Chr1	stalkie_big_nohaplotig	CDS	125493553	125493626	100	-	2	ID=FBgn0003392.1.mrna1.cds2;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 165 238 +
Chr1	stalkie_big_nohaplotig	CDS	125492727	125493483	99	-	1	ID=FBgn0003392.1.mrna1.cds3;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 239 995 +
Chr1	stalkie_big_nohaplotig	CDS	125492541	125492657	100	-	2	ID=FBgn0003392.1.mrna1.cds4;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 996 1112 +
Chr1	stalkie_big_nohaplotig	CDS	125492240	125492468	99	-	2	ID=FBgn0003392.1.mrna1.cds5;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 1113 1341 +
Chr1	stalkie_big_nohaplotig	CDS	125492002	125492159	100	-	0	ID=FBgn0003392.1.mrna1.cds6;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 1342 1499 +
Chr1	stalkie_big_nohaplotig	CDS	125491828	125491934	99	-	2	ID=FBgn0003392.1.mrna1.cds7;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 1500 1606 +
Chr1	stalkie_big_nohaplotig	CDS	125489489	125489682	99	-	1	ID=FBgn0003392.1.mrna1.cds8;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 1607 1800 +
Chr1	stalkie_big_nohaplotig	CDS	125488641	125488760	100	-	0	ID=FBgn0003392.1.mrna1.cds9;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 1801 1920 +
Chr1	stalkie_big_nohaplotig	CDS	125483275	125483478	100	-	0	ID=FBgn0003392.1.mrna1.cds10;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 1921 2124 +
Chr1	stalkie_big_nohaplotig	CDS	125483119	125483212	100	-	0	ID=FBgn0003392.1.mrna1.cds11;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 2125 2218 +
Chr1	stalkie_big_nohaplotig	CDS	125482587	125482723	100	-	1	ID=FBgn0003392.1.mrna1.cds12;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 2219 2355 +
Chr1	stalkie_big_nohaplotig	CDS	125482322	125482473	98	-	0	ID=FBgn0003392.1.mrna1.cds13;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 2356 2507 +
Chr1	stalkie_big_nohaplotig	CDS	125477667	125477814	100	-	2	ID=FBgn0003392.1.mrna1.cds14;Name=FBgn0003392.1;Parent=FBgn0003392.1.mrna1;Target=FBgn0003392.1 2508 2655 +
Chr1	stalkie_big_nohaplotig	mRNA	125503541	125504653	.	-	.	ID=FBgn0030704.1.mrna1;Name=FBgn0030704.1;Parent=FBgn0030704.1.path1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1105;mismatches=8;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	125503541	125504653	99	-	.	ID=FBgn0030704.1.mrna1.exon1;Name=FBgn0030704.1;Parent=FBgn0030704.1.mrna1;Target=FBgn0030704.1 1113 1 .
Chr1	stalkie_big_nohaplotig	CDS	125503541	125504653	99	-	0	ID=FBgn0030704.1.mrna1.cds1;Name=FBgn0030704.1;Parent=FBgn0030704.1.mrna1;Target=FBgn0030704.1 1113 1 .
Chr1	stalkie_big_nohaplotig	mRNA	125537901	125549299	.	-	.	ID=FBgn0039164.1.mrna1;Name=FBgn0039164.1;Parent=FBgn0039164.1.path1;Dir=sensecoverage=99.6;identity=99.6;matches=3240;mismatches=14;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	125549120	125549299	100	-	.	ID=FBgn0039164.1.mrna1.exon1;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 1 180 +
Chr1	stalkie_big_nohaplotig	exon	125548859	125549057	99	-	.	ID=FBgn0039164.1.mrna1.exon2;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 181 379 +
Chr1	stalkie_big_nohaplotig	exon	125548307	125548580	98	-	.	ID=FBgn0039164.1.mrna1.exon3;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 380 653 +
Chr1	stalkie_big_nohaplotig	exon	125548079	125548205	98	-	.	ID=FBgn0039164.1.mrna1.exon4;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 654 780 +
Chr1	stalkie_big_nohaplotig	exon	125546332	125546409	100	-	.	ID=FBgn0039164.1.mrna1.exon5;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 781 858 +
Chr1	stalkie_big_nohaplotig	exon	125546102	125546274	100	-	.	ID=FBgn0039164.1.mrna1.exon6;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 859 1031 +
Chr1	stalkie_big_nohaplotig	exon	125545659	125545862	99	-	.	ID=FBgn0039164.1.mrna1.exon7;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 1032 1235 +
Chr1	stalkie_big_nohaplotig	exon	125545413	125545600	100	-	.	ID=FBgn0039164.1.mrna1.exon8;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 1236 1423 +
Chr1	stalkie_big_nohaplotig	exon	125544978	125545306	100	-	.	ID=FBgn0039164.1.mrna1.exon9;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 1424 1752 +
Chr1	stalkie_big_nohaplotig	exon	125542853	125543166	99	-	.	ID=FBgn0039164.1.mrna1.exon10;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 1753 2066 +
Chr1	stalkie_big_nohaplotig	exon	125542577	125542793	100	-	.	ID=FBgn0039164.1.mrna1.exon11;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 2067 2283 +
Chr1	stalkie_big_nohaplotig	exon	125539049	125539219	99	-	.	ID=FBgn0039164.1.mrna1.exon12;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 2284 2454 +
Chr1	stalkie_big_nohaplotig	exon	125538880	125538984	99	-	.	ID=FBgn0039164.1.mrna1.exon13;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 2455 2559 +
Chr1	stalkie_big_nohaplotig	exon	125538561	125538812	100	-	.	ID=FBgn0039164.1.mrna1.exon14;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 2560 2811 +
Chr1	stalkie_big_nohaplotig	exon	125538405	125538488	100	-	.	ID=FBgn0039164.1.mrna1.exon15;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 2812 2895 +
Chr1	stalkie_big_nohaplotig	exon	125538089	125538319	100	-	.	ID=FBgn0039164.1.mrna1.exon16;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 2896 3126 +
Chr1	stalkie_big_nohaplotig	exon	125537901	125538028	97	-	.	ID=FBgn0039164.1.mrna1.exon17;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 3127 3254 +
Chr1	stalkie_big_nohaplotig	CDS	125549120	125549299	100	-	0	ID=FBgn0039164.1.mrna1.cds1;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 1 180 +
Chr1	stalkie_big_nohaplotig	CDS	125548859	125549057	99	-	0	ID=FBgn0039164.1.mrna1.cds2;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 181 379 +
Chr1	stalkie_big_nohaplotig	CDS	125548307	125548580	98	-	1	ID=FBgn0039164.1.mrna1.cds3;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 380 653 +
Chr1	stalkie_big_nohaplotig	CDS	125548079	125548205	98	-	2	ID=FBgn0039164.1.mrna1.cds4;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 654 780 +
Chr1	stalkie_big_nohaplotig	CDS	125546332	125546409	100	-	0	ID=FBgn0039164.1.mrna1.cds5;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 781 858 +
Chr1	stalkie_big_nohaplotig	CDS	125546102	125546274	100	-	0	ID=FBgn0039164.1.mrna1.cds6;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 859 1031 +
Chr1	stalkie_big_nohaplotig	CDS	125545659	125545862	99	-	2	ID=FBgn0039164.1.mrna1.cds7;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 1032 1235 +
Chr1	stalkie_big_nohaplotig	CDS	125545413	125545600	100	-	2	ID=FBgn0039164.1.mrna1.cds8;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 1236 1423 +
Chr1	stalkie_big_nohaplotig	CDS	125544978	125545306	100	-	1	ID=FBgn0039164.1.mrna1.cds9;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 1424 1752 +
Chr1	stalkie_big_nohaplotig	CDS	125542853	125543166	99	-	0	ID=FBgn0039164.1.mrna1.cds10;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 1753 2066 +
Chr1	stalkie_big_nohaplotig	CDS	125542577	125542793	100	-	2	ID=FBgn0039164.1.mrna1.cds11;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 2067 2283 +
Chr1	stalkie_big_nohaplotig	CDS	125539049	125539219	99	-	0	ID=FBgn0039164.1.mrna1.cds12;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 2284 2454 +
Chr1	stalkie_big_nohaplotig	CDS	125538880	125538984	99	-	0	ID=FBgn0039164.1.mrna1.cds13;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 2455 2559 +
Chr1	stalkie_big_nohaplotig	CDS	125538561	125538812	100	-	0	ID=FBgn0039164.1.mrna1.cds14;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 2560 2811 +
Chr1	stalkie_big_nohaplotig	CDS	125538405	125538488	100	-	0	ID=FBgn0039164.1.mrna1.cds15;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 2812 2895 +
Chr1	stalkie_big_nohaplotig	CDS	125538089	125538319	100	-	0	ID=FBgn0039164.1.mrna1.cds16;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 2896 3126 +
Chr1	stalkie_big_nohaplotig	CDS	125537903	125538028	97	-	0	ID=FBgn0039164.1.mrna1.cds17;Name=FBgn0039164.1;Parent=FBgn0039164.1.mrna1;Target=FBgn0039164.1 3127 3252 +
ChrX	stalkie_big_nohaplotig	mRNA	42011510	42012042	.	+	.	ID=FBgn0028506.1.mrna1;Name=FBgn0028506.1;Parent=FBgn0028506.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=459;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	42011510	42011612	100	+	.	ID=FBgn0028506.1.mrna1.exon1;Name=FBgn0028506.1;Parent=FBgn0028506.1.mrna1;Target=FBgn0028506.1 1 103 +
ChrX	stalkie_big_nohaplotig	exon	42011687	42012042	100	+	.	ID=FBgn0028506.1.mrna1.exon2;Name=FBgn0028506.1;Parent=FBgn0028506.1.mrna1;Target=FBgn0028506.1 104 459 +
ChrX	stalkie_big_nohaplotig	CDS	42011510	42011612	100	+	0	ID=FBgn0028506.1.mrna1.cds1;Name=FBgn0028506.1;Parent=FBgn0028506.1.mrna1;Target=FBgn0028506.1 1 103 +
ChrX	stalkie_big_nohaplotig	CDS	42011687	42012042	100	+	1	ID=FBgn0028506.1.mrna1.cds2;Name=FBgn0028506.1;Parent=FBgn0028506.1.mrna1;Target=FBgn0028506.1 104 459 +
Chr1	stalkie_big_nohaplotig	mRNA	144940798	144948966	.	+	.	ID=FBgn0025681.1.mrna1;Name=FBgn0025681.1;Parent=FBgn0025681.1.path1;Dir=sensecoverage=100.0;identity=99.1;matches=3187;mismatches=29;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	144940798	144941531	99	+	.	ID=FBgn0025681.1.mrna1.exon1;Name=FBgn0025681.1;Parent=FBgn0025681.1.mrna1;Target=FBgn0025681.1 1 734 +
Chr1	stalkie_big_nohaplotig	exon	144941596	144941992	99	+	.	ID=FBgn0025681.1.mrna1.exon2;Name=FBgn0025681.1;Parent=FBgn0025681.1.mrna1;Target=FBgn0025681.1 735 1131 +
Chr1	stalkie_big_nohaplotig	exon	144943630	144944692	98	+	.	ID=FBgn0025681.1.mrna1.exon3;Name=FBgn0025681.1;Parent=FBgn0025681.1.mrna1;Target=FBgn0025681.1 1132 2194 +
Chr1	stalkie_big_nohaplotig	exon	144944901	144945401	99	+	.	ID=FBgn0025681.1.mrna1.exon4;Name=FBgn0025681.1;Parent=FBgn0025681.1.mrna1;Target=FBgn0025681.1 2195 2695 +
Chr1	stalkie_big_nohaplotig	exon	144945833	144945871	100	+	.	ID=FBgn0025681.1.mrna1.exon5;Name=FBgn0025681.1;Parent=FBgn0025681.1.mrna1;Target=FBgn0025681.1 2696 2734 +
Chr1	stalkie_big_nohaplotig	exon	144948485	144948966	99	+	.	ID=FBgn0025681.1.mrna1.exon6;Name=FBgn0025681.1;Parent=FBgn0025681.1.mrna1;Target=FBgn0025681.1 2735 3216 +
Chr1	stalkie_big_nohaplotig	CDS	144940798	144941531	99	+	0	ID=FBgn0025681.1.mrna1.cds1;Name=FBgn0025681.1;Parent=FBgn0025681.1.mrna1;Target=FBgn0025681.1 1 734 +
Chr1	stalkie_big_nohaplotig	CDS	144941596	144941992	99	+	2	ID=FBgn0025681.1.mrna1.cds2;Name=FBgn0025681.1;Parent=FBgn0025681.1.mrna1;Target=FBgn0025681.1 735 1131 +
Chr1	stalkie_big_nohaplotig	CDS	144943630	144944692	98	+	0	ID=FBgn0025681.1.mrna1.cds3;Name=FBgn0025681.1;Parent=FBgn0025681.1.mrna1;Target=FBgn0025681.1 1132 2194 +
Chr1	stalkie_big_nohaplotig	CDS	144944901	144945401	99	+	1	ID=FBgn0025681.1.mrna1.cds4;Name=FBgn0025681.1;Parent=FBgn0025681.1.mrna1;Target=FBgn0025681.1 2195 2695 +
Chr1	stalkie_big_nohaplotig	CDS	144945833	144945871	100	+	1	ID=FBgn0025681.1.mrna1.cds5;Name=FBgn0025681.1;Parent=FBgn0025681.1.mrna1;Target=FBgn0025681.1 2696 2734 +
Chr1	stalkie_big_nohaplotig	CDS	144948485	144948966	99	+	1	ID=FBgn0025681.1.mrna1.cds6;Name=FBgn0025681.1;Parent=FBgn0025681.1.mrna1;Target=FBgn0025681.1 2735 3216 +
Chr1	stalkie_big_nohaplotig	mRNA	144895128	144896882	.	-	.	ID=ORF477.mrna1;Name=ORF477;Parent=ORF477.path1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1746;mismatches=7;indels=0;unknowns=2
Chr1	stalkie_big_nohaplotig	exon	144895128	144896882	99	-	.	ID=ORF477.mrna1.exon1;Name=ORF477;Parent=ORF477.mrna1;Target=ORF477 1755 1 .
Chr1	stalkie_big_nohaplotig	CDS	144895128	144896882	99	-	0	ID=ORF477.mrna1.cds1;Name=ORF477;Parent=ORF477.mrna1;Target=ORF477 1755 1 .
Chr1	stalkie_big_nohaplotig	mRNA	144888895	144891746	.	+	.	ID=FBgn0000346.1.mrna1;Name=FBgn0000346.1;Parent=FBgn0000346.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2276;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	144888895	144888945	100	+	.	ID=FBgn0000346.1.mrna1.exon1;Name=FBgn0000346.1;Parent=FBgn0000346.1.mrna1;Target=FBgn0000346.1 1 51 +
Chr1	stalkie_big_nohaplotig	exon	144889010	144889098	100	+	.	ID=FBgn0000346.1.mrna1.exon2;Name=FBgn0000346.1;Parent=FBgn0000346.1.mrna1;Target=FBgn0000346.1 52 140 +
Chr1	stalkie_big_nohaplotig	exon	144889160	144889378	100	+	.	ID=FBgn0000346.1.mrna1.exon3;Name=FBgn0000346.1;Parent=FBgn0000346.1.mrna1;Target=FBgn0000346.1 141 359 +
Chr1	stalkie_big_nohaplotig	exon	144889449	144889594	100	+	.	ID=FBgn0000346.1.mrna1.exon4;Name=FBgn0000346.1;Parent=FBgn0000346.1.mrna1;Target=FBgn0000346.1 360 505 +
Chr1	stalkie_big_nohaplotig	exon	144889658	144890139	100	+	.	ID=FBgn0000346.1.mrna1.exon5;Name=FBgn0000346.1;Parent=FBgn0000346.1.mrna1;Target=FBgn0000346.1 506 987 +
Chr1	stalkie_big_nohaplotig	exon	144890207	144890731	100	+	.	ID=FBgn0000346.1.mrna1.exon6;Name=FBgn0000346.1;Parent=FBgn0000346.1.mrna1;Target=FBgn0000346.1 988 1512 +
Chr1	stalkie_big_nohaplotig	exon	144890792	144891082	99	+	.	ID=FBgn0000346.1.mrna1.exon7;Name=FBgn0000346.1;Parent=FBgn0000346.1.mrna1;Target=FBgn0000346.1 1513 1803 +
Chr1	stalkie_big_nohaplotig	exon	144891145	144891329	100	+	.	ID=FBgn0000346.1.mrna1.exon8;Name=FBgn0000346.1;Parent=FBgn0000346.1.mrna1;Target=FBgn0000346.1 1804 1988 +
Chr1	stalkie_big_nohaplotig	exon	144891394	144891552	100	+	.	ID=FBgn0000346.1.mrna1.exon9;Name=FBgn0000346.1;Parent=FBgn0000346.1.mrna1;Target=FBgn0000346.1 1989 2147 +
Chr1	stalkie_big_nohaplotig	exon	144891617	144891746	100	+	.	ID=FBgn0000346.1.mrna1.exon10;Name=FBgn0000346.1;Parent=FBgn0000346.1.mrna1;Target=FBgn0000346.1 2148 2277 +
Chr1	stalkie_big_nohaplotig	CDS	144888895	144888945	100	+	0	ID=FBgn0000346.1.mrna1.cds1;Name=FBgn0000346.1;Parent=FBgn0000346.1.mrna1;Target=FBgn0000346.1 1 51 +
Chr1	stalkie_big_nohaplotig	CDS	144889010	144889098	100	+	0	ID=FBgn0000346.1.mrna1.cds2;Name=FBgn0000346.1;Parent=FBgn0000346.1.mrna1;Target=FBgn0000346.1 52 140 +
Chr1	stalkie_big_nohaplotig	CDS	144889160	144889378	100	+	2	ID=FBgn0000346.1.mrna1.cds3;Name=FBgn0000346.1;Parent=FBgn0000346.1.mrna1;Target=FBgn0000346.1 141 359 +
Chr1	stalkie_big_nohaplotig	CDS	144889449	144889594	100	+	2	ID=FBgn0000346.1.mrna1.cds4;Name=FBgn0000346.1;Parent=FBgn0000346.1.mrna1;Target=FBgn0000346.1 360 505 +
Chr1	stalkie_big_nohaplotig	CDS	144889658	144890139	100	+	1	ID=FBgn0000346.1.mrna1.cds5;Name=FBgn0000346.1;Parent=FBgn0000346.1.mrna1;Target=FBgn0000346.1 506 987 +
Chr1	stalkie_big_nohaplotig	CDS	144890207	144890731	100	+	0	ID=FBgn0000346.1.mrna1.cds6;Name=FBgn0000346.1;Parent=FBgn0000346.1.mrna1;Target=FBgn0000346.1 988 1512 +
Chr1	stalkie_big_nohaplotig	CDS	144890792	144891082	99	+	0	ID=FBgn0000346.1.mrna1.cds7;Name=FBgn0000346.1;Parent=FBgn0000346.1.mrna1;Target=FBgn0000346.1 1513 1803 +
Chr1	stalkie_big_nohaplotig	CDS	144891145	144891329	100	+	0	ID=FBgn0000346.1.mrna1.cds8;Name=FBgn0000346.1;Parent=FBgn0000346.1.mrna1;Target=FBgn0000346.1 1804 1988 +
Chr1	stalkie_big_nohaplotig	CDS	144891394	144891552	100	+	2	ID=FBgn0000346.1.mrna1.cds9;Name=FBgn0000346.1;Parent=FBgn0000346.1.mrna1;Target=FBgn0000346.1 1989 2147 +
Chr1	stalkie_big_nohaplotig	CDS	144891617	144891746	100	+	2	ID=FBgn0000346.1.mrna1.cds10;Name=FBgn0000346.1;Parent=FBgn0000346.1.mrna1;Target=FBgn0000346.1 2148 2277 +
Chr1	stalkie_big_nohaplotig	mRNA	144846905	144850343	.	-	.	ID=FBgn0030928.1.mrna1;Name=FBgn0030928.1;Parent=FBgn0030928.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=503;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	144850094	144850343	99	-	.	ID=FBgn0030928.1.mrna1.exon1;Name=FBgn0030928.1;Parent=FBgn0030928.1.mrna1;Target=FBgn0030928.1 1 250 +
Chr1	stalkie_big_nohaplotig	exon	144846905	144847158	100	-	.	ID=FBgn0030928.1.mrna1.exon2;Name=FBgn0030928.1;Parent=FBgn0030928.1.mrna1;Target=FBgn0030928.1 251 504 +
Chr1	stalkie_big_nohaplotig	CDS	144850094	144850298	100	-	0	ID=FBgn0030928.1.mrna1.cds1;Name=FBgn0030928.1;Parent=FBgn0030928.1.mrna1;Target=FBgn0030928.1 46 250 +
Chr1	stalkie_big_nohaplotig	CDS	144846905	144847158	100	-	1	ID=FBgn0030928.1.mrna1.cds2;Name=FBgn0030928.1;Parent=FBgn0030928.1.mrna1;Target=FBgn0030928.1 251 504 +
Chr1	stalkie_big_nohaplotig	mRNA	19203311	19215851	.	+	.	ID=FBgn0026160.1.mrna1;Name=FBgn0026160.1;Parent=FBgn0026160.1.path1;Dir=sensecoverage=99.8;identity=99.8;matches=3247;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	19203311	19203568	100	+	.	ID=FBgn0026160.1.mrna1.exon1;Name=FBgn0026160.1;Parent=FBgn0026160.1.mrna1;Target=FBgn0026160.1 7 264 +
Chr1	stalkie_big_nohaplotig	exon	19204825	19205112	100	+	.	ID=FBgn0026160.1.mrna1.exon2;Name=FBgn0026160.1;Parent=FBgn0026160.1.mrna1;Target=FBgn0026160.1 265 552 +
Chr1	stalkie_big_nohaplotig	exon	19210627	19211444	99	+	.	ID=FBgn0026160.1.mrna1.exon3;Name=FBgn0026160.1;Parent=FBgn0026160.1.mrna1;Target=FBgn0026160.1 553 1370 +
Chr1	stalkie_big_nohaplotig	exon	19211512	19211630	99	+	.	ID=FBgn0026160.1.mrna1.exon4;Name=FBgn0026160.1;Parent=FBgn0026160.1.mrna1;Target=FBgn0026160.1 1371 1489 +
Chr1	stalkie_big_nohaplotig	exon	19211713	19211845	100	+	.	ID=FBgn0026160.1.mrna1.exon5;Name=FBgn0026160.1;Parent=FBgn0026160.1.mrna1;Target=FBgn0026160.1 1490 1622 +
Chr1	stalkie_big_nohaplotig	exon	19212590	19212803	100	+	.	ID=FBgn0026160.1.mrna1.exon6;Name=FBgn0026160.1;Parent=FBgn0026160.1.mrna1;Target=FBgn0026160.1 1623 1836 +
Chr1	stalkie_big_nohaplotig	exon	19212899	19213245	99	+	.	ID=FBgn0026160.1.mrna1.exon7;Name=FBgn0026160.1;Parent=FBgn0026160.1.mrna1;Target=FBgn0026160.1 1837 2183 +
Chr1	stalkie_big_nohaplotig	exon	19213321	19213716	100	+	.	ID=FBgn0026160.1.mrna1.exon8;Name=FBgn0026160.1;Parent=FBgn0026160.1.mrna1;Target=FBgn0026160.1 2184 2579 +
Chr1	stalkie_big_nohaplotig	exon	19213785	19213923	100	+	.	ID=FBgn0026160.1.mrna1.exon9;Name=FBgn0026160.1;Parent=FBgn0026160.1.mrna1;Target=FBgn0026160.1 2580 2718 +
Chr1	stalkie_big_nohaplotig	exon	19213999	19214409	99	+	.	ID=FBgn0026160.1.mrna1.exon10;Name=FBgn0026160.1;Parent=FBgn0026160.1.mrna1;Target=FBgn0026160.1 2719 3129 +
Chr1	stalkie_big_nohaplotig	exon	19215723	19215851	100	+	.	ID=FBgn0026160.1.mrna1.exon11;Name=FBgn0026160.1;Parent=FBgn0026160.1.mrna1;Target=FBgn0026160.1 3130 3258 +
Chr1	stalkie_big_nohaplotig	CDS	19203311	19203568	100	+	0	ID=FBgn0026160.1.mrna1.cds1;Name=FBgn0026160.1;Parent=FBgn0026160.1.mrna1;Target=FBgn0026160.1 7 264 +
Chr1	stalkie_big_nohaplotig	CDS	19204825	19205112	100	+	0	ID=FBgn0026160.1.mrna1.cds2;Name=FBgn0026160.1;Parent=FBgn0026160.1.mrna1;Target=FBgn0026160.1 265 552 +
Chr1	stalkie_big_nohaplotig	CDS	19210627	19211444	99	+	0	ID=FBgn0026160.1.mrna1.cds3;Name=FBgn0026160.1;Parent=FBgn0026160.1.mrna1;Target=FBgn0026160.1 553 1370 +
Chr1	stalkie_big_nohaplotig	CDS	19211512	19211630	99	+	2	ID=FBgn0026160.1.mrna1.cds4;Name=FBgn0026160.1;Parent=FBgn0026160.1.mrna1;Target=FBgn0026160.1 1371 1489 +
Chr1	stalkie_big_nohaplotig	CDS	19211713	19211845	100	+	1	ID=FBgn0026160.1.mrna1.cds5;Name=FBgn0026160.1;Parent=FBgn0026160.1.mrna1;Target=FBgn0026160.1 1490 1622 +
Chr1	stalkie_big_nohaplotig	CDS	19212590	19212803	100	+	2	ID=FBgn0026160.1.mrna1.cds6;Name=FBgn0026160.1;Parent=FBgn0026160.1.mrna1;Target=FBgn0026160.1 1623 1836 +
Chr1	stalkie_big_nohaplotig	CDS	19212899	19213245	99	+	0	ID=FBgn0026160.1.mrna1.cds7;Name=FBgn0026160.1;Parent=FBgn0026160.1.mrna1;Target=FBgn0026160.1 1837 2183 +
Chr1	stalkie_big_nohaplotig	CDS	19213321	19213716	100	+	2	ID=FBgn0026160.1.mrna1.cds8;Name=FBgn0026160.1;Parent=FBgn0026160.1.mrna1;Target=FBgn0026160.1 2184 2579 +
Chr1	stalkie_big_nohaplotig	CDS	19213785	19213923	100	+	2	ID=FBgn0026160.1.mrna1.cds9;Name=FBgn0026160.1;Parent=FBgn0026160.1.mrna1;Target=FBgn0026160.1 2580 2718 +
Chr1	stalkie_big_nohaplotig	CDS	19213999	19214409	99	+	0	ID=FBgn0026160.1.mrna1.cds10;Name=FBgn0026160.1;Parent=FBgn0026160.1.mrna1;Target=FBgn0026160.1 2719 3129 +
Chr1	stalkie_big_nohaplotig	CDS	19215723	19215851	100	+	0	ID=FBgn0026160.1.mrna1.cds11;Name=FBgn0026160.1;Parent=FBgn0026160.1.mrna1;Target=FBgn0026160.1 3130 3258 +
Chr2	stalkie_big_nohaplotig	mRNA	124401392	124402439	.	+	.	ID=FBgn0038183.1.mrna1;Name=FBgn0038183.1;Parent=FBgn0038183.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=936;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	124401392	124401586	100	+	.	ID=FBgn0038183.1.mrna1.exon1;Name=FBgn0038183.1;Parent=FBgn0038183.1.mrna1;Target=FBgn0038183.1 1 195 +
Chr2	stalkie_big_nohaplotig	exon	124401644	124401761	100	+	.	ID=FBgn0038183.1.mrna1.exon2;Name=FBgn0038183.1;Parent=FBgn0038183.1.mrna1;Target=FBgn0038183.1 196 313 +
Chr2	stalkie_big_nohaplotig	exon	124401817	124402439	100	+	.	ID=FBgn0038183.1.mrna1.exon3;Name=FBgn0038183.1;Parent=FBgn0038183.1.mrna1;Target=FBgn0038183.1 314 936 +
Chr2	stalkie_big_nohaplotig	CDS	124401392	124401586	100	+	0	ID=FBgn0038183.1.mrna1.cds1;Name=FBgn0038183.1;Parent=FBgn0038183.1.mrna1;Target=FBgn0038183.1 1 195 +
Chr2	stalkie_big_nohaplotig	CDS	124401644	124401761	100	+	0	ID=FBgn0038183.1.mrna1.cds2;Name=FBgn0038183.1;Parent=FBgn0038183.1.mrna1;Target=FBgn0038183.1 196 313 +
Chr2	stalkie_big_nohaplotig	CDS	124401817	124402439	100	+	1	ID=FBgn0038183.1.mrna1.cds3;Name=FBgn0038183.1;Parent=FBgn0038183.1.mrna1;Target=FBgn0038183.1 314 936 +
ChrX	stalkie_big_nohaplotig	mRNA	37740943	37747693	.	-	.	ID=FBgn0010197.mrna1;Name=FBgn0010197;Parent=FBgn0010197.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1088;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	37747647	37747693	100	-	.	ID=FBgn0010197.mrna1.exon1;Name=FBgn0010197;Parent=FBgn0010197.mrna1;Target=FBgn0010197 1 47 +
ChrX	stalkie_big_nohaplotig	exon	37745731	37745923	100	-	.	ID=FBgn0010197.mrna1.exon2;Name=FBgn0010197;Parent=FBgn0010197.mrna1;Target=FBgn0010197 48 240 +
ChrX	stalkie_big_nohaplotig	exon	37745281	37745487	100	-	.	ID=FBgn0010197.mrna1.exon3;Name=FBgn0010197;Parent=FBgn0010197.mrna1;Target=FBgn0010197 241 447 +
ChrX	stalkie_big_nohaplotig	exon	37744995	37745147	99	-	.	ID=FBgn0010197.mrna1.exon4;Name=FBgn0010197;Parent=FBgn0010197.mrna1;Target=FBgn0010197 448 600 +
ChrX	stalkie_big_nohaplotig	exon	37740943	37741431	100	-	.	ID=FBgn0010197.mrna1.exon5;Name=FBgn0010197;Parent=FBgn0010197.mrna1;Target=FBgn0010197 601 1089 +
ChrX	stalkie_big_nohaplotig	CDS	37747647	37747693	100	-	0	ID=FBgn0010197.mrna1.cds1;Name=FBgn0010197;Parent=FBgn0010197.mrna1;Target=FBgn0010197 1 47 +
ChrX	stalkie_big_nohaplotig	CDS	37745731	37745923	100	-	2	ID=FBgn0010197.mrna1.cds2;Name=FBgn0010197;Parent=FBgn0010197.mrna1;Target=FBgn0010197 48 240 +
ChrX	stalkie_big_nohaplotig	CDS	37745281	37745487	100	-	0	ID=FBgn0010197.mrna1.cds3;Name=FBgn0010197;Parent=FBgn0010197.mrna1;Target=FBgn0010197 241 447 +
ChrX	stalkie_big_nohaplotig	CDS	37744995	37745147	99	-	0	ID=FBgn0010197.mrna1.cds4;Name=FBgn0010197;Parent=FBgn0010197.mrna1;Target=FBgn0010197 448 600 +
ChrX	stalkie_big_nohaplotig	CDS	37740943	37741431	100	-	0	ID=FBgn0010197.mrna1.cds5;Name=FBgn0010197;Parent=FBgn0010197.mrna1;Target=FBgn0010197 601 1089 +
Chr2	stalkie_big_nohaplotig	mRNA	119957048	119967459	.	-	.	ID=FBgn0038071.1.mrna1;Name=FBgn0038071.1;Parent=FBgn0038071.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2601;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	119967270	119967459	100	-	.	ID=FBgn0038071.1.mrna1.exon1;Name=FBgn0038071.1;Parent=FBgn0038071.1.mrna1;Target=FBgn0038071.1 1 190 +
Chr2	stalkie_big_nohaplotig	exon	119959881	119959958	100	-	.	ID=FBgn0038071.1.mrna1.exon2;Name=FBgn0038071.1;Parent=FBgn0038071.1.mrna1;Target=FBgn0038071.1 191 268 +
Chr2	stalkie_big_nohaplotig	exon	119959146	119959448	100	-	.	ID=FBgn0038071.1.mrna1.exon3;Name=FBgn0038071.1;Parent=FBgn0038071.1.mrna1;Target=FBgn0038071.1 269 571 +
Chr2	stalkie_big_nohaplotig	exon	119957048	119959077	100	-	.	ID=FBgn0038071.1.mrna1.exon4;Name=FBgn0038071.1;Parent=FBgn0038071.1.mrna1;Target=FBgn0038071.1 572 2601 +
Chr2	stalkie_big_nohaplotig	CDS	119967270	119967459	100	-	0	ID=FBgn0038071.1.mrna1.cds1;Name=FBgn0038071.1;Parent=FBgn0038071.1.mrna1;Target=FBgn0038071.1 1 190 +
Chr2	stalkie_big_nohaplotig	CDS	119959881	119959958	100	-	1	ID=FBgn0038071.1.mrna1.cds2;Name=FBgn0038071.1;Parent=FBgn0038071.1.mrna1;Target=FBgn0038071.1 191 268 +
Chr2	stalkie_big_nohaplotig	CDS	119959146	119959448	100	-	1	ID=FBgn0038071.1.mrna1.cds3;Name=FBgn0038071.1;Parent=FBgn0038071.1.mrna1;Target=FBgn0038071.1 269 571 +
Chr2	stalkie_big_nohaplotig	CDS	119957048	119959077	100	-	1	ID=FBgn0038071.1.mrna1.cds4;Name=FBgn0038071.1;Parent=FBgn0038071.1.mrna1;Target=FBgn0038071.1 572 2601 +
Chr2	stalkie_big_nohaplotig	mRNA	120169578	120205284	.	+	.	ID=FBgn0053110.1.mrna1;Name=FBgn0053110.1;Parent=FBgn0053110.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=972;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	120169578	120169728	100	+	.	ID=FBgn0053110.1.mrna1.exon1;Name=FBgn0053110.1;Parent=FBgn0053110.1.mrna1;Target=FBgn0053110.1 1 151 +
Chr2	stalkie_big_nohaplotig	exon	120181764	120181954	100	+	.	ID=FBgn0053110.1.mrna1.exon2;Name=FBgn0053110.1;Parent=FBgn0053110.1.mrna1;Target=FBgn0053110.1 152 342 +
Chr2	stalkie_big_nohaplotig	exon	120182068	120182148	100	+	.	ID=FBgn0053110.1.mrna1.exon3;Name=FBgn0053110.1;Parent=FBgn0053110.1.mrna1;Target=FBgn0053110.1 343 423 +
Chr2	stalkie_big_nohaplotig	exon	120189194	120189356	100	+	.	ID=FBgn0053110.1.mrna1.exon4;Name=FBgn0053110.1;Parent=FBgn0053110.1.mrna1;Target=FBgn0053110.1 424 586 +
Chr2	stalkie_big_nohaplotig	exon	120192537	120192673	100	+	.	ID=FBgn0053110.1.mrna1.exon5;Name=FBgn0053110.1;Parent=FBgn0053110.1.mrna1;Target=FBgn0053110.1 587 723 +
Chr2	stalkie_big_nohaplotig	exon	120205036	120205284	100	+	.	ID=FBgn0053110.1.mrna1.exon6;Name=FBgn0053110.1;Parent=FBgn0053110.1.mrna1;Target=FBgn0053110.1 724 972 +
Chr2	stalkie_big_nohaplotig	CDS	120169578	120169728	100	+	0	ID=FBgn0053110.1.mrna1.cds1;Name=FBgn0053110.1;Parent=FBgn0053110.1.mrna1;Target=FBgn0053110.1 1 151 +
Chr2	stalkie_big_nohaplotig	CDS	120181764	120181954	100	+	1	ID=FBgn0053110.1.mrna1.cds2;Name=FBgn0053110.1;Parent=FBgn0053110.1.mrna1;Target=FBgn0053110.1 152 342 +
Chr2	stalkie_big_nohaplotig	CDS	120182068	120182148	100	+	0	ID=FBgn0053110.1.mrna1.cds3;Name=FBgn0053110.1;Parent=FBgn0053110.1.mrna1;Target=FBgn0053110.1 343 423 +
Chr2	stalkie_big_nohaplotig	CDS	120189194	120189356	100	+	0	ID=FBgn0053110.1.mrna1.cds4;Name=FBgn0053110.1;Parent=FBgn0053110.1.mrna1;Target=FBgn0053110.1 424 586 +
Chr2	stalkie_big_nohaplotig	CDS	120192537	120192673	100	+	1	ID=FBgn0053110.1.mrna1.cds5;Name=FBgn0053110.1;Parent=FBgn0053110.1.mrna1;Target=FBgn0053110.1 587 723 +
Chr2	stalkie_big_nohaplotig	CDS	120205036	120205284	100	+	0	ID=FBgn0053110.1.mrna1.cds6;Name=FBgn0053110.1;Parent=FBgn0053110.1.mrna1;Target=FBgn0053110.1 724 972 +
Chr2	stalkie_big_nohaplotig	mRNA	120315245	120319814	.	+	.	ID=FBgn0051523.1.mrna1;Name=FBgn0051523.1;Parent=FBgn0051523.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1151;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	120315245	120315257	100	+	.	ID=FBgn0051523.1.mrna1.exon1;Name=FBgn0051523.1;Parent=FBgn0051523.1.mrna1;Target=FBgn0051523.1 1 13 +
Chr2	stalkie_big_nohaplotig	exon	120315861	120315938	100	+	.	ID=FBgn0051523.1.mrna1.exon2;Name=FBgn0051523.1;Parent=FBgn0051523.1.mrna1;Target=FBgn0051523.1 14 91 +
Chr2	stalkie_big_nohaplotig	exon	120316016	120316206	99	+	.	ID=FBgn0051523.1.mrna1.exon3;Name=FBgn0051523.1;Parent=FBgn0051523.1.mrna1;Target=FBgn0051523.1 92 282 +
Chr2	stalkie_big_nohaplotig	exon	120316278	120316358	100	+	.	ID=FBgn0051523.1.mrna1.exon4;Name=FBgn0051523.1;Parent=FBgn0051523.1.mrna1;Target=FBgn0051523.1 283 363 +
Chr2	stalkie_big_nohaplotig	exon	120317214	120317376	100	+	.	ID=FBgn0051523.1.mrna1.exon5;Name=FBgn0051523.1;Parent=FBgn0051523.1.mrna1;Target=FBgn0051523.1 364 526 +
Chr2	stalkie_big_nohaplotig	exon	120317498	120317634	100	+	.	ID=FBgn0051523.1.mrna1.exon6;Name=FBgn0051523.1;Parent=FBgn0051523.1.mrna1;Target=FBgn0051523.1 527 663 +
Chr2	stalkie_big_nohaplotig	exon	120317713	120318021	100	+	.	ID=FBgn0051523.1.mrna1.exon7;Name=FBgn0051523.1;Parent=FBgn0051523.1.mrna1;Target=FBgn0051523.1 664 972 +
Chr2	stalkie_big_nohaplotig	exon	120319635	120319814	100	+	.	ID=FBgn0051523.1.mrna1.exon8;Name=FBgn0051523.1;Parent=FBgn0051523.1.mrna1;Target=FBgn0051523.1 973 1152 +
Chr2	stalkie_big_nohaplotig	CDS	120315245	120315257	100	+	0	ID=FBgn0051523.1.mrna1.cds1;Name=FBgn0051523.1;Parent=FBgn0051523.1.mrna1;Target=FBgn0051523.1 1 13 +
Chr2	stalkie_big_nohaplotig	CDS	120315861	120315938	100	+	1	ID=FBgn0051523.1.mrna1.cds2;Name=FBgn0051523.1;Parent=FBgn0051523.1.mrna1;Target=FBgn0051523.1 14 91 +
Chr2	stalkie_big_nohaplotig	CDS	120316016	120316206	99	+	1	ID=FBgn0051523.1.mrna1.cds3;Name=FBgn0051523.1;Parent=FBgn0051523.1.mrna1;Target=FBgn0051523.1 92 282 +
Chr2	stalkie_big_nohaplotig	CDS	120316278	120316358	100	+	0	ID=FBgn0051523.1.mrna1.cds4;Name=FBgn0051523.1;Parent=FBgn0051523.1.mrna1;Target=FBgn0051523.1 283 363 +
Chr2	stalkie_big_nohaplotig	CDS	120317214	120317376	100	+	0	ID=FBgn0051523.1.mrna1.cds5;Name=FBgn0051523.1;Parent=FBgn0051523.1.mrna1;Target=FBgn0051523.1 364 526 +
Chr2	stalkie_big_nohaplotig	CDS	120317498	120317634	100	+	1	ID=FBgn0051523.1.mrna1.cds6;Name=FBgn0051523.1;Parent=FBgn0051523.1.mrna1;Target=FBgn0051523.1 527 663 +
Chr2	stalkie_big_nohaplotig	CDS	120317713	120318021	100	+	0	ID=FBgn0051523.1.mrna1.cds7;Name=FBgn0051523.1;Parent=FBgn0051523.1.mrna1;Target=FBgn0051523.1 664 972 +
Chr2	stalkie_big_nohaplotig	CDS	120319635	120319814	100	+	0	ID=FBgn0051523.1.mrna1.cds8;Name=FBgn0051523.1;Parent=FBgn0051523.1.mrna1;Target=FBgn0051523.1 973 1152 +
ChrX	stalkie_big_nohaplotig	mRNA	48339520	48344669	.	-	.	ID=FBgn0032051.1.mrna1;Name=FBgn0032051.1;Parent=FBgn0032051.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2121;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	48344557	48344669	100	-	.	ID=FBgn0032051.1.mrna1.exon1;Name=FBgn0032051.1;Parent=FBgn0032051.1.mrna1;Target=FBgn0032051.1 1 113 +
ChrX	stalkie_big_nohaplotig	exon	48342600	48344460	100	-	.	ID=FBgn0032051.1.mrna1.exon2;Name=FBgn0032051.1;Parent=FBgn0032051.1.mrna1;Target=FBgn0032051.1 114 1974 +
ChrX	stalkie_big_nohaplotig	exon	48339520	48339666	100	-	.	ID=FBgn0032051.1.mrna1.exon3;Name=FBgn0032051.1;Parent=FBgn0032051.1.mrna1;Target=FBgn0032051.1 1975 2121 +
ChrX	stalkie_big_nohaplotig	CDS	48344557	48344669	100	-	0	ID=FBgn0032051.1.mrna1.cds1;Name=FBgn0032051.1;Parent=FBgn0032051.1.mrna1;Target=FBgn0032051.1 1 113 +
ChrX	stalkie_big_nohaplotig	CDS	48342600	48344460	100	-	2	ID=FBgn0032051.1.mrna1.cds2;Name=FBgn0032051.1;Parent=FBgn0032051.1.mrna1;Target=FBgn0032051.1 114 1974 +
ChrX	stalkie_big_nohaplotig	CDS	48339520	48339666	100	-	0	ID=FBgn0032051.1.mrna1.cds3;Name=FBgn0032051.1;Parent=FBgn0032051.1.mrna1;Target=FBgn0032051.1 1975 2121 +
ChrX	stalkie_big_nohaplotig	mRNA	48413429	48430699	.	+	.	ID=FBgn0028394.1.mrna1;Name=FBgn0028394.1;Parent=FBgn0028394.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1290;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	48413429	48413469	100	+	.	ID=FBgn0028394.1.mrna1.exon1;Name=FBgn0028394.1;Parent=FBgn0028394.1.mrna1;Target=FBgn0028394.1 1 41 +
ChrX	stalkie_big_nohaplotig	exon	48413694	48413755	100	+	.	ID=FBgn0028394.1.mrna1.exon2;Name=FBgn0028394.1;Parent=FBgn0028394.1.mrna1;Target=FBgn0028394.1 42 103 +
ChrX	stalkie_big_nohaplotig	exon	48417688	48417838	100	+	.	ID=FBgn0028394.1.mrna1.exon3;Name=FBgn0028394.1;Parent=FBgn0028394.1.mrna1;Target=FBgn0028394.1 104 254 +
ChrX	stalkie_big_nohaplotig	exon	48419306	48419535	100	+	.	ID=FBgn0028394.1.mrna1.exon4;Name=FBgn0028394.1;Parent=FBgn0028394.1.mrna1;Target=FBgn0028394.1 255 484 +
ChrX	stalkie_big_nohaplotig	exon	48429894	48430699	100	+	.	ID=FBgn0028394.1.mrna1.exon5;Name=FBgn0028394.1;Parent=FBgn0028394.1.mrna1;Target=FBgn0028394.1 485 1290 +
ChrX	stalkie_big_nohaplotig	CDS	48413429	48413469	100	+	0	ID=FBgn0028394.1.mrna1.cds1;Name=FBgn0028394.1;Parent=FBgn0028394.1.mrna1;Target=FBgn0028394.1 1 41 +
ChrX	stalkie_big_nohaplotig	CDS	48413694	48413755	100	+	2	ID=FBgn0028394.1.mrna1.cds2;Name=FBgn0028394.1;Parent=FBgn0028394.1.mrna1;Target=FBgn0028394.1 42 103 +
ChrX	stalkie_big_nohaplotig	CDS	48417688	48417838	100	+	1	ID=FBgn0028394.1.mrna1.cds3;Name=FBgn0028394.1;Parent=FBgn0028394.1.mrna1;Target=FBgn0028394.1 104 254 +
ChrX	stalkie_big_nohaplotig	CDS	48419306	48419535	100	+	2	ID=FBgn0028394.1.mrna1.cds4;Name=FBgn0028394.1;Parent=FBgn0028394.1.mrna1;Target=FBgn0028394.1 255 484 +
ChrX	stalkie_big_nohaplotig	CDS	48429894	48430699	100	+	1	ID=FBgn0028394.1.mrna1.cds5;Name=FBgn0028394.1;Parent=FBgn0028394.1.mrna1;Target=FBgn0028394.1 485 1290 +
Chr2	stalkie_big_nohaplotig	mRNA	41536593	41542167	.	-	.	ID=FBgn0022029.1.mrna1;Name=FBgn0022029.1;Parent=FBgn0022029.1.path1;Dir=sensecoverage=44.3;identity=99.4;matches=630;mismatches=2;indels=2;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	41541945	41542167	99	-	.	ID=FBgn0022029.1.mrna1.exon1;Name=FBgn0022029.1;Parent=FBgn0022029.1.mrna1;Target=FBgn0022029.1 1 221 +
Chr2	stalkie_big_nohaplotig	exon	41536772	41537073	99	-	.	ID=FBgn0022029.1.mrna1.exon2;Name=FBgn0022029.1;Parent=FBgn0022029.1.mrna1;Target=FBgn0022029.1 222 523 +
Chr2	stalkie_big_nohaplotig	exon	41536593	41536701	99	-	.	ID=FBgn0022029.1.mrna1.exon3;Name=FBgn0022029.1;Parent=FBgn0022029.1.mrna1;Target=FBgn0022029.1 524 632 +
Chr2	stalkie_big_nohaplotig	CDS	41541945	41542069	100	-	0	ID=FBgn0022029.1.mrna1.cds1;Name=FBgn0022029.1;Parent=FBgn0022029.1.mrna1;Target=FBgn0022029.1 97 221 +
Chr2	stalkie_big_nohaplotig	CDS	41536772	41537073	99	-	2	ID=FBgn0022029.1.mrna1.cds2;Name=FBgn0022029.1;Parent=FBgn0022029.1.mrna1;Target=FBgn0022029.1 222 523 +
Chr2	stalkie_big_nohaplotig	CDS	41536595	41536701	99	-	1	ID=FBgn0022029.1.mrna1.cds3;Name=FBgn0022029.1;Parent=FBgn0022029.1.mrna1;Target=FBgn0022029.1 524 630 +
ChrX	stalkie_big_nohaplotig	mRNA	35342734	35343957	.	+	.	ID=ORF1124.mrna1;Name=ORF1124;Parent=ORF1124.path1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1216;mismatches=8;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	35342734	35343957	99	+	.	ID=ORF1124.mrna1.exon1;Name=ORF1124;Parent=ORF1124.mrna1;Target=ORF1124 1224 1 .
ChrX	stalkie_big_nohaplotig	CDS	35342734	35343957	99	+	0	ID=ORF1124.mrna1.cds1;Name=ORF1124;Parent=ORF1124.mrna1;Target=ORF1124 1224 1 .
Chr1	stalkie_big_nohaplotig	mRNA	153554343	153555415	.	+	.	ID=FBgn0030156.1.mrna1;Name=FBgn0030156.1;Parent=FBgn0030156.1.path1;Dir=indeterminatecoverage=100.0;identity=96.9;matches=1064;mismatches=9;indels=25;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	153554343	153555415	96	+	.	ID=FBgn0030156.1.mrna1.exon1;Name=FBgn0030156.1;Parent=FBgn0030156.1.mrna1;Target=FBgn0030156.1 1098 1 .
Chr1	stalkie_big_nohaplotig	CDS	153554345	153554436	98	+	0	ID=FBgn0030156.1.mrna1.cds1;Name=FBgn0030156.1;Parent=FBgn0030156.1.mrna1;Target=FBgn0030156.1 95 3 .
Chr1	stalkie_big_nohaplotig	mRNA	153259783	153261553	.	+	.	ID=FBgn0020378.1.mrna2;Name=FBgn0020378.1;Parent=FBgn0020378.1.path2;Dir=sensecoverage=93.6;identity=99.6;matches=1691;mismatches=7;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	153259783	153260120	99	+	.	ID=FBgn0020378.1.mrna2.exon1;Name=FBgn0020378.1;Parent=FBgn0020378.1.mrna2;Target=FBgn0020378.1 118 455 +
Chr1	stalkie_big_nohaplotig	exon	153260194	153261553	99	+	.	ID=FBgn0020378.1.mrna2.exon2;Name=FBgn0020378.1;Parent=FBgn0020378.1.mrna2;Target=FBgn0020378.1 456 1815 +
Chr1	stalkie_big_nohaplotig	CDS	153259783	153260120	99	+	0	ID=FBgn0020378.1.mrna2.cds1;Name=FBgn0020378.1;Parent=FBgn0020378.1.mrna2;Target=FBgn0020378.1 118 455 +
Chr1	stalkie_big_nohaplotig	CDS	153260194	153261553	99	+	2	ID=FBgn0020378.1.mrna2.cds2;Name=FBgn0020378.1;Parent=FBgn0020378.1.mrna2;Target=FBgn0020378.1 456 1815 +
Chr1	stalkie_big_nohaplotig	mRNA	153081792	153088351	.	-	.	ID=FBgn0261617.mrna1;Name=FBgn0261617;Parent=FBgn0261617.path1;Dir=sensecoverage=100.0;identity=99.9;matches=4530;mismatches=6;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	153087271	153088351	99	-	.	ID=FBgn0261617.mrna1.exon1;Name=FBgn0261617;Parent=FBgn0261617.mrna1;Target=FBgn0261617 1 1081 +
Chr1	stalkie_big_nohaplotig	exon	153086904	153087193	99	-	.	ID=FBgn0261617.mrna1.exon2;Name=FBgn0261617;Parent=FBgn0261617.mrna1;Target=FBgn0261617 1082 1371 +
Chr1	stalkie_big_nohaplotig	exon	153086663	153086820	99	-	.	ID=FBgn0261617.mrna1.exon3;Name=FBgn0261617;Parent=FBgn0261617.mrna1;Target=FBgn0261617 1372 1529 +
Chr1	stalkie_big_nohaplotig	exon	153085319	153085429	100	-	.	ID=FBgn0261617.mrna1.exon4;Name=FBgn0261617;Parent=FBgn0261617.mrna1;Target=FBgn0261617 1530 1640 +
Chr1	stalkie_big_nohaplotig	exon	153084170	153085121	99	-	.	ID=FBgn0261617.mrna1.exon5;Name=FBgn0261617;Parent=FBgn0261617.mrna1;Target=FBgn0261617 1641 2592 +
Chr1	stalkie_big_nohaplotig	exon	153083873	153084103	100	-	.	ID=FBgn0261617.mrna1.exon6;Name=FBgn0261617;Parent=FBgn0261617.mrna1;Target=FBgn0261617 2593 2823 +
Chr1	stalkie_big_nohaplotig	exon	153083559	153083789	100	-	.	ID=FBgn0261617.mrna1.exon7;Name=FBgn0261617;Parent=FBgn0261617.mrna1;Target=FBgn0261617 2824 3054 +
Chr1	stalkie_big_nohaplotig	exon	153083071	153083468	100	-	.	ID=FBgn0261617.mrna1.exon8;Name=FBgn0261617;Parent=FBgn0261617.mrna1;Target=FBgn0261617 3055 3452 +
Chr1	stalkie_big_nohaplotig	exon	153082657	153083005	100	-	.	ID=FBgn0261617.mrna1.exon9;Name=FBgn0261617;Parent=FBgn0261617.mrna1;Target=FBgn0261617 3453 3801 +
Chr1	stalkie_big_nohaplotig	exon	153082267	153082581	100	-	.	ID=FBgn0261617.mrna1.exon10;Name=FBgn0261617;Parent=FBgn0261617.mrna1;Target=FBgn0261617 3802 4116 +
Chr1	stalkie_big_nohaplotig	exon	153081792	153082211	100	-	.	ID=FBgn0261617.mrna1.exon11;Name=FBgn0261617;Parent=FBgn0261617.mrna1;Target=FBgn0261617 4117 4536 +
Chr1	stalkie_big_nohaplotig	CDS	153087271	153088351	99	-	0	ID=FBgn0261617.mrna1.cds1;Name=FBgn0261617;Parent=FBgn0261617.mrna1;Target=FBgn0261617 1 1081 +
Chr1	stalkie_big_nohaplotig	CDS	153086904	153087193	99	-	1	ID=FBgn0261617.mrna1.cds2;Name=FBgn0261617;Parent=FBgn0261617.mrna1;Target=FBgn0261617 1082 1371 +
Chr1	stalkie_big_nohaplotig	CDS	153086663	153086820	99	-	0	ID=FBgn0261617.mrna1.cds3;Name=FBgn0261617;Parent=FBgn0261617.mrna1;Target=FBgn0261617 1372 1529 +
Chr1	stalkie_big_nohaplotig	CDS	153085319	153085429	100	-	2	ID=FBgn0261617.mrna1.cds4;Name=FBgn0261617;Parent=FBgn0261617.mrna1;Target=FBgn0261617 1530 1640 +
Chr1	stalkie_big_nohaplotig	CDS	153084170	153085121	99	-	2	ID=FBgn0261617.mrna1.cds5;Name=FBgn0261617;Parent=FBgn0261617.mrna1;Target=FBgn0261617 1641 2592 +
Chr1	stalkie_big_nohaplotig	CDS	153083873	153084103	100	-	0	ID=FBgn0261617.mrna1.cds6;Name=FBgn0261617;Parent=FBgn0261617.mrna1;Target=FBgn0261617 2593 2823 +
Chr1	stalkie_big_nohaplotig	CDS	153083559	153083789	100	-	0	ID=FBgn0261617.mrna1.cds7;Name=FBgn0261617;Parent=FBgn0261617.mrna1;Target=FBgn0261617 2824 3054 +
Chr1	stalkie_big_nohaplotig	CDS	153083071	153083468	100	-	0	ID=FBgn0261617.mrna1.cds8;Name=FBgn0261617;Parent=FBgn0261617.mrna1;Target=FBgn0261617 3055 3452 +
Chr1	stalkie_big_nohaplotig	CDS	153082657	153083005	100	-	2	ID=FBgn0261617.mrna1.cds9;Name=FBgn0261617;Parent=FBgn0261617.mrna1;Target=FBgn0261617 3453 3801 +
Chr1	stalkie_big_nohaplotig	CDS	153082267	153082581	100	-	0	ID=FBgn0261617.mrna1.cds10;Name=FBgn0261617;Parent=FBgn0261617.mrna1;Target=FBgn0261617 3802 4116 +
Chr1	stalkie_big_nohaplotig	CDS	153081792	153082211	100	-	0	ID=FBgn0261617.mrna1.cds11;Name=FBgn0261617;Parent=FBgn0261617.mrna1;Target=FBgn0261617 4117 4536 +
ChrX	stalkie_big_nohaplotig	mRNA	46288744	46296849	.	-	.	ID=FBgn0000183.1.mrna1;Name=FBgn0000183.1;Parent=FBgn0000183.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=2370;mismatches=3;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	46296592	46296849	100	-	.	ID=FBgn0000183.1.mrna1.exon1;Name=FBgn0000183.1;Parent=FBgn0000183.1.mrna1;Target=FBgn0000183.1 1 258 +
ChrX	stalkie_big_nohaplotig	exon	46293136	46293501	99	-	.	ID=FBgn0000183.1.mrna1.exon2;Name=FBgn0000183.1;Parent=FBgn0000183.1.mrna1;Target=FBgn0000183.1 259 624 +
ChrX	stalkie_big_nohaplotig	exon	46292863	46293000	100	-	.	ID=FBgn0000183.1.mrna1.exon3;Name=FBgn0000183.1;Parent=FBgn0000183.1.mrna1;Target=FBgn0000183.1 625 762 +
ChrX	stalkie_big_nohaplotig	exon	46291949	46292799	99	-	.	ID=FBgn0000183.1.mrna1.exon4;Name=FBgn0000183.1;Parent=FBgn0000183.1.mrna1;Target=FBgn0000183.1 763 1613 +
ChrX	stalkie_big_nohaplotig	exon	46291644	46291861	100	-	.	ID=FBgn0000183.1.mrna1.exon5;Name=FBgn0000183.1;Parent=FBgn0000183.1.mrna1;Target=FBgn0000183.1 1614 1831 +
ChrX	stalkie_big_nohaplotig	exon	46291330	46291581	100	-	.	ID=FBgn0000183.1.mrna1.exon6;Name=FBgn0000183.1;Parent=FBgn0000183.1.mrna1;Target=FBgn0000183.1 1832 2083 +
ChrX	stalkie_big_nohaplotig	exon	46291099	46291273	100	-	.	ID=FBgn0000183.1.mrna1.exon7;Name=FBgn0000183.1;Parent=FBgn0000183.1.mrna1;Target=FBgn0000183.1 2084 2258 +
ChrX	stalkie_big_nohaplotig	exon	46288744	46288858	99	-	.	ID=FBgn0000183.1.mrna1.exon8;Name=FBgn0000183.1;Parent=FBgn0000183.1.mrna1;Target=FBgn0000183.1 2259 2373 +
ChrX	stalkie_big_nohaplotig	CDS	46296592	46296849	100	-	0	ID=FBgn0000183.1.mrna1.cds1;Name=FBgn0000183.1;Parent=FBgn0000183.1.mrna1;Target=FBgn0000183.1 1 258 +
ChrX	stalkie_big_nohaplotig	CDS	46293136	46293501	99	-	0	ID=FBgn0000183.1.mrna1.cds2;Name=FBgn0000183.1;Parent=FBgn0000183.1.mrna1;Target=FBgn0000183.1 259 624 +
ChrX	stalkie_big_nohaplotig	CDS	46292863	46293000	100	-	0	ID=FBgn0000183.1.mrna1.cds3;Name=FBgn0000183.1;Parent=FBgn0000183.1.mrna1;Target=FBgn0000183.1 625 762 +
ChrX	stalkie_big_nohaplotig	CDS	46291949	46292799	99	-	0	ID=FBgn0000183.1.mrna1.cds4;Name=FBgn0000183.1;Parent=FBgn0000183.1.mrna1;Target=FBgn0000183.1 763 1613 +
ChrX	stalkie_big_nohaplotig	CDS	46291644	46291861	100	-	2	ID=FBgn0000183.1.mrna1.cds5;Name=FBgn0000183.1;Parent=FBgn0000183.1.mrna1;Target=FBgn0000183.1 1614 1831 +
ChrX	stalkie_big_nohaplotig	CDS	46291330	46291581	100	-	1	ID=FBgn0000183.1.mrna1.cds6;Name=FBgn0000183.1;Parent=FBgn0000183.1.mrna1;Target=FBgn0000183.1 1832 2083 +
ChrX	stalkie_big_nohaplotig	CDS	46291099	46291273	100	-	1	ID=FBgn0000183.1.mrna1.cds7;Name=FBgn0000183.1;Parent=FBgn0000183.1.mrna1;Target=FBgn0000183.1 2084 2258 +
ChrX	stalkie_big_nohaplotig	CDS	46288744	46288858	99	-	2	ID=FBgn0000183.1.mrna1.cds8;Name=FBgn0000183.1;Parent=FBgn0000183.1.mrna1;Target=FBgn0000183.1 2259 2373 +
Chr2	stalkie_big_nohaplotig	mRNA	43589087	43592555	.	-	.	ID=ORF198.mrna1;Name=ORF198;Parent=ORF198.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2529;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	43592303	43592555	100	-	.	ID=ORF198.mrna1.exon1;Name=ORF198;Parent=ORF198.mrna1;Target=ORF198 1 253 +
Chr2	stalkie_big_nohaplotig	exon	43592210	43592245	100	-	.	ID=ORF198.mrna1.exon2;Name=ORF198;Parent=ORF198.mrna1;Target=ORF198 254 289 +
Chr2	stalkie_big_nohaplotig	exon	43591781	43592146	100	-	.	ID=ORF198.mrna1.exon3;Name=ORF198;Parent=ORF198.mrna1;Target=ORF198 290 655 +
Chr2	stalkie_big_nohaplotig	exon	43590854	43591012	100	-	.	ID=ORF198.mrna1.exon4;Name=ORF198;Parent=ORF198.mrna1;Target=ORF198 656 814 +
Chr2	stalkie_big_nohaplotig	exon	43589087	43590801	100	-	.	ID=ORF198.mrna1.exon5;Name=ORF198;Parent=ORF198.mrna1;Target=ORF198 815 2529 +
Chr2	stalkie_big_nohaplotig	CDS	43592303	43592555	100	-	0	ID=ORF198.mrna1.cds1;Name=ORF198;Parent=ORF198.mrna1;Target=ORF198 1 253 +
Chr2	stalkie_big_nohaplotig	CDS	43592210	43592245	100	-	1	ID=ORF198.mrna1.cds2;Name=ORF198;Parent=ORF198.mrna1;Target=ORF198 254 289 +
Chr2	stalkie_big_nohaplotig	CDS	43591781	43592146	100	-	1	ID=ORF198.mrna1.cds3;Name=ORF198;Parent=ORF198.mrna1;Target=ORF198 290 655 +
Chr2	stalkie_big_nohaplotig	CDS	43590854	43591012	100	-	1	ID=ORF198.mrna1.cds4;Name=ORF198;Parent=ORF198.mrna1;Target=ORF198 656 814 +
Chr2	stalkie_big_nohaplotig	CDS	43589087	43590801	100	-	1	ID=ORF198.mrna1.cds5;Name=ORF198;Parent=ORF198.mrna1;Target=ORF198 815 2529 +
Chr2	stalkie_big_nohaplotig	mRNA	43575594	43577305	.	+	.	ID=FBgn0035021.1.mrna1;Name=FBgn0035021.1;Parent=FBgn0035021.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1590;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	43575594	43576538	100	+	.	ID=FBgn0035021.1.mrna1.exon1;Name=FBgn0035021.1;Parent=FBgn0035021.1.mrna1;Target=FBgn0035021.1 1 945 +
Chr2	stalkie_big_nohaplotig	exon	43576610	43576711	100	+	.	ID=FBgn0035021.1.mrna1.exon2;Name=FBgn0035021.1;Parent=FBgn0035021.1.mrna1;Target=FBgn0035021.1 946 1047 +
Chr2	stalkie_big_nohaplotig	exon	43576763	43577305	100	+	.	ID=FBgn0035021.1.mrna1.exon3;Name=FBgn0035021.1;Parent=FBgn0035021.1.mrna1;Target=FBgn0035021.1 1048 1590 +
Chr2	stalkie_big_nohaplotig	CDS	43575594	43576538	100	+	0	ID=FBgn0035021.1.mrna1.cds1;Name=FBgn0035021.1;Parent=FBgn0035021.1.mrna1;Target=FBgn0035021.1 1 945 +
Chr2	stalkie_big_nohaplotig	CDS	43576610	43576711	100	+	0	ID=FBgn0035021.1.mrna1.cds2;Name=FBgn0035021.1;Parent=FBgn0035021.1.mrna1;Target=FBgn0035021.1 946 1047 +
Chr2	stalkie_big_nohaplotig	CDS	43576763	43577305	100	+	0	ID=FBgn0035021.1.mrna1.cds3;Name=FBgn0035021.1;Parent=FBgn0035021.1.mrna1;Target=FBgn0035021.1 1048 1590 +
Chr1	stalkie_big_nohaplotig	mRNA	14790171	14793209	.	+	.	ID=FBgn0035147.1.mrna1;Name=FBgn0035147.1;Parent=FBgn0035147.1.path1;Dir=sensecoverage=99.2;identity=100.0;matches=1057;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	14790171	14790417	100	+	.	ID=FBgn0035147.1.mrna1.exon1;Name=FBgn0035147.1;Parent=FBgn0035147.1.mrna1;Target=FBgn0035147.1 9 255 +
Chr1	stalkie_big_nohaplotig	exon	14792334	14792624	100	+	.	ID=FBgn0035147.1.mrna1.exon2;Name=FBgn0035147.1;Parent=FBgn0035147.1.mrna1;Target=FBgn0035147.1 256 546 +
Chr1	stalkie_big_nohaplotig	exon	14792691	14793209	100	+	.	ID=FBgn0035147.1.mrna1.exon3;Name=FBgn0035147.1;Parent=FBgn0035147.1.mrna1;Target=FBgn0035147.1 547 1065 +
Chr1	stalkie_big_nohaplotig	CDS	14790172	14790417	100	+	0	ID=FBgn0035147.1.mrna1.cds1;Name=FBgn0035147.1;Parent=FBgn0035147.1.mrna1;Target=FBgn0035147.1 10 255 +
Chr1	stalkie_big_nohaplotig	CDS	14792334	14792624	100	+	0	ID=FBgn0035147.1.mrna1.cds2;Name=FBgn0035147.1;Parent=FBgn0035147.1.mrna1;Target=FBgn0035147.1 256 546 +
Chr1	stalkie_big_nohaplotig	CDS	14792691	14793209	100	+	0	ID=FBgn0035147.1.mrna1.cds3;Name=FBgn0035147.1;Parent=FBgn0035147.1.mrna1;Target=FBgn0035147.1 547 1065 +
Chr1	stalkie_big_nohaplotig	mRNA	13562878	13564980	.	+	.	ID=FBgn0013469.1.mrna1;Name=FBgn0013469.1;Parent=FBgn0013469.1.path1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=2098;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	13562878	13564980	99	+	.	ID=FBgn0013469.1.mrna1.exon1;Name=FBgn0013469.1;Parent=FBgn0013469.1.mrna1;Target=FBgn0013469.1 2103 1 .
Chr1	stalkie_big_nohaplotig	CDS	13562878	13564980	99	+	0	ID=FBgn0013469.1.mrna1.cds1;Name=FBgn0013469.1;Parent=FBgn0013469.1.mrna1;Target=FBgn0013469.1 2103 1 .
Chr1	stalkie_big_nohaplotig	mRNA	14553332	14554664	.	-	.	ID=FBgn0035166.1.mrna1;Name=FBgn0035166.1;Parent=FBgn0035166.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1230;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	14554365	14554664	100	-	.	ID=FBgn0035166.1.mrna1.exon1;Name=FBgn0035166.1;Parent=FBgn0035166.1.mrna1;Target=FBgn0035166.1 1 300 +
Chr1	stalkie_big_nohaplotig	exon	14554168	14554324	100	-	.	ID=FBgn0035166.1.mrna1.exon2;Name=FBgn0035166.1;Parent=FBgn0035166.1.mrna1;Target=FBgn0035166.1 301 457 +
Chr1	stalkie_big_nohaplotig	exon	14553332	14554104	100	-	.	ID=FBgn0035166.1.mrna1.exon3;Name=FBgn0035166.1;Parent=FBgn0035166.1.mrna1;Target=FBgn0035166.1 458 1230 +
Chr1	stalkie_big_nohaplotig	CDS	14554365	14554664	100	-	0	ID=FBgn0035166.1.mrna1.cds1;Name=FBgn0035166.1;Parent=FBgn0035166.1.mrna1;Target=FBgn0035166.1 1 300 +
Chr1	stalkie_big_nohaplotig	CDS	14554168	14554324	100	-	0	ID=FBgn0035166.1.mrna1.cds2;Name=FBgn0035166.1;Parent=FBgn0035166.1.mrna1;Target=FBgn0035166.1 301 457 +
Chr1	stalkie_big_nohaplotig	CDS	14553332	14554104	100	-	1	ID=FBgn0035166.1.mrna1.cds3;Name=FBgn0035166.1;Parent=FBgn0035166.1.mrna1;Target=FBgn0035166.1 458 1230 +
Chr1	stalkie_big_nohaplotig	mRNA	14073557	14074602	.	+	.	ID=FBgn0035440.1.mrna1;Name=FBgn0035440.1;Parent=FBgn0035440.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=792;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	14073557	14073688	100	+	.	ID=FBgn0035440.1.mrna1.exon1;Name=FBgn0035440.1;Parent=FBgn0035440.1.mrna1;Target=FBgn0035440.1 1 132 +
Chr1	stalkie_big_nohaplotig	exon	14073751	14074000	100	+	.	ID=FBgn0035440.1.mrna1.exon2;Name=FBgn0035440.1;Parent=FBgn0035440.1.mrna1;Target=FBgn0035440.1 133 382 +
Chr1	stalkie_big_nohaplotig	exon	14074080	14074264	100	+	.	ID=FBgn0035440.1.mrna1.exon3;Name=FBgn0035440.1;Parent=FBgn0035440.1.mrna1;Target=FBgn0035440.1 383 567 +
Chr1	stalkie_big_nohaplotig	exon	14074329	14074506	100	+	.	ID=FBgn0035440.1.mrna1.exon4;Name=FBgn0035440.1;Parent=FBgn0035440.1.mrna1;Target=FBgn0035440.1 568 745 +
Chr1	stalkie_big_nohaplotig	exon	14074556	14074602	100	+	.	ID=FBgn0035440.1.mrna1.exon5;Name=FBgn0035440.1;Parent=FBgn0035440.1.mrna1;Target=FBgn0035440.1 746 792 +
Chr1	stalkie_big_nohaplotig	CDS	14073557	14073688	100	+	0	ID=FBgn0035440.1.mrna1.cds1;Name=FBgn0035440.1;Parent=FBgn0035440.1.mrna1;Target=FBgn0035440.1 1 132 +
Chr1	stalkie_big_nohaplotig	CDS	14073751	14074000	100	+	0	ID=FBgn0035440.1.mrna1.cds2;Name=FBgn0035440.1;Parent=FBgn0035440.1.mrna1;Target=FBgn0035440.1 133 382 +
Chr1	stalkie_big_nohaplotig	CDS	14074080	14074264	100	+	1	ID=FBgn0035440.1.mrna1.cds3;Name=FBgn0035440.1;Parent=FBgn0035440.1.mrna1;Target=FBgn0035440.1 383 567 +
Chr1	stalkie_big_nohaplotig	CDS	14074329	14074506	100	+	0	ID=FBgn0035440.1.mrna1.cds4;Name=FBgn0035440.1;Parent=FBgn0035440.1.mrna1;Target=FBgn0035440.1 568 745 +
Chr1	stalkie_big_nohaplotig	CDS	14074556	14074602	100	+	1	ID=FBgn0035440.1.mrna1.cds5;Name=FBgn0035440.1;Parent=FBgn0035440.1.mrna1;Target=FBgn0035440.1 746 792 +
Chr1	stalkie_big_nohaplotig	mRNA	14061201	14062559	.	-	.	ID=FBgn0036250.1.mrna1;Name=FBgn0036250.1;Parent=FBgn0036250.1.path1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1355;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	14061201	14062559	99	-	.	ID=FBgn0036250.1.mrna1.exon1;Name=FBgn0036250.1;Parent=FBgn0036250.1.mrna1;Target=FBgn0036250.1 1359 1 .
Chr1	stalkie_big_nohaplotig	CDS	14061201	14062559	99	-	0	ID=FBgn0036250.1.mrna1.cds1;Name=FBgn0036250.1;Parent=FBgn0036250.1.mrna1;Target=FBgn0036250.1 1359 1 .
Chr1	stalkie_big_nohaplotig	mRNA	13720789	13722204	.	-	.	ID=FBgn0035178.mrna1;Name=FBgn0035178;Parent=FBgn0035178.path1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1413;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	13720789	13722204	99	-	.	ID=FBgn0035178.mrna1.exon1;Name=FBgn0035178;Parent=FBgn0035178.mrna1;Target=FBgn0035178 1416 1 .
Chr1	stalkie_big_nohaplotig	CDS	13720789	13722204	99	-	0	ID=FBgn0035178.mrna1.cds1;Name=FBgn0035178;Parent=FBgn0035178.mrna1;Target=FBgn0035178 1416 1 .
Chr1	stalkie_big_nohaplotig	mRNA	13914333	13917637	.	-	.	ID=FBgn0052479.mrna1;Name=FBgn0052479;Parent=FBgn0052479.path1;Dir=sensecoverage=100.0;identity=99.7;matches=2676;mismatches=8;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	13915987	13917637	99	-	.	ID=FBgn0052479.mrna1.exon1;Name=FBgn0052479;Parent=FBgn0052479.mrna1;Target=FBgn0052479 1 1652 +
Chr1	stalkie_big_nohaplotig	exon	13915436	13915676	100	-	.	ID=FBgn0052479.mrna1.exon2;Name=FBgn0052479;Parent=FBgn0052479.mrna1;Target=FBgn0052479 1653 1893 +
Chr1	stalkie_big_nohaplotig	exon	13915302	13915382	100	-	.	ID=FBgn0052479.mrna1.exon3;Name=FBgn0052479;Parent=FBgn0052479.mrna1;Target=FBgn0052479 1894 1974 +
Chr1	stalkie_big_nohaplotig	exon	13915006	13915173	99	-	.	ID=FBgn0052479.mrna1.exon4;Name=FBgn0052479;Parent=FBgn0052479.mrna1;Target=FBgn0052479 1975 2142 +
Chr1	stalkie_big_nohaplotig	exon	13914718	13914946	100	-	.	ID=FBgn0052479.mrna1.exon5;Name=FBgn0052479;Parent=FBgn0052479.mrna1;Target=FBgn0052479 2143 2371 +
Chr1	stalkie_big_nohaplotig	exon	13914333	13914646	99	-	.	ID=FBgn0052479.mrna1.exon6;Name=FBgn0052479;Parent=FBgn0052479.mrna1;Target=FBgn0052479 2372 2685 +
Chr1	stalkie_big_nohaplotig	CDS	13917352	13917635	98	-	0	ID=FBgn0052479.mrna1.cds1;Name=FBgn0052479;Parent=FBgn0052479.mrna1;Target=FBgn0052479 3 287 +
Chr1	stalkie_big_nohaplotig	mRNA	14719944	14721136	.	-	.	ID=ORF1153.mrna1;Name=ORF1153;Parent=ORF1153.path1;Dir=indeterminatecoverage=100.0;identity=98.3;matches=1189;mismatches=4;indels=16;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	14719944	14721136	98	-	.	ID=ORF1153.mrna1.exon1;Name=ORF1153;Parent=ORF1153.mrna1;Target=ORF1153 1209 1 .
Chr1	stalkie_big_nohaplotig	CDS	14719944	14721136	98	-	0	ID=ORF1153.mrna1.cds1;Name=ORF1153;Parent=ORF1153.mrna1;Target=ORF1153 1209 1 .
Chr1	stalkie_big_nohaplotig	mRNA	14613505	14623000	.	+	.	ID=FBgn0011206.1.mrna1;Name=FBgn0011206.1;Parent=FBgn0011206.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=711;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	14613505	14613704	100	+	.	ID=FBgn0011206.1.mrna1.exon1;Name=FBgn0011206.1;Parent=FBgn0011206.1.mrna1;Target=FBgn0011206.1 1 200 +
Chr1	stalkie_big_nohaplotig	exon	14614260	14614413	100	+	.	ID=FBgn0011206.1.mrna1.exon2;Name=FBgn0011206.1;Parent=FBgn0011206.1.mrna1;Target=FBgn0011206.1 201 354 +
Chr1	stalkie_big_nohaplotig	exon	14619028	14619087	100	+	.	ID=FBgn0011206.1.mrna1.exon3;Name=FBgn0011206.1;Parent=FBgn0011206.1.mrna1;Target=FBgn0011206.1 355 414 +
Chr1	stalkie_big_nohaplotig	exon	14619427	14619529	100	+	.	ID=FBgn0011206.1.mrna1.exon4;Name=FBgn0011206.1;Parent=FBgn0011206.1.mrna1;Target=FBgn0011206.1 415 517 +
Chr1	stalkie_big_nohaplotig	exon	14619585	14619673	100	+	.	ID=FBgn0011206.1.mrna1.exon5;Name=FBgn0011206.1;Parent=FBgn0011206.1.mrna1;Target=FBgn0011206.1 518 606 +
Chr1	stalkie_big_nohaplotig	exon	14620519	14620552	100	+	.	ID=FBgn0011206.1.mrna1.exon6;Name=FBgn0011206.1;Parent=FBgn0011206.1.mrna1;Target=FBgn0011206.1 607 640 +
Chr1	stalkie_big_nohaplotig	exon	14622930	14623000	100	+	.	ID=FBgn0011206.1.mrna1.exon7;Name=FBgn0011206.1;Parent=FBgn0011206.1.mrna1;Target=FBgn0011206.1 641 711 +
Chr1	stalkie_big_nohaplotig	CDS	14613505	14613704	100	+	0	ID=FBgn0011206.1.mrna1.cds1;Name=FBgn0011206.1;Parent=FBgn0011206.1.mrna1;Target=FBgn0011206.1 1 200 +
Chr1	stalkie_big_nohaplotig	CDS	14614260	14614413	100	+	2	ID=FBgn0011206.1.mrna1.cds2;Name=FBgn0011206.1;Parent=FBgn0011206.1.mrna1;Target=FBgn0011206.1 201 354 +
Chr1	stalkie_big_nohaplotig	CDS	14619028	14619087	100	+	0	ID=FBgn0011206.1.mrna1.cds3;Name=FBgn0011206.1;Parent=FBgn0011206.1.mrna1;Target=FBgn0011206.1 355 414 +
Chr1	stalkie_big_nohaplotig	CDS	14619427	14619529	100	+	0	ID=FBgn0011206.1.mrna1.cds4;Name=FBgn0011206.1;Parent=FBgn0011206.1.mrna1;Target=FBgn0011206.1 415 517 +
Chr1	stalkie_big_nohaplotig	CDS	14619585	14619673	100	+	1	ID=FBgn0011206.1.mrna1.cds5;Name=FBgn0011206.1;Parent=FBgn0011206.1.mrna1;Target=FBgn0011206.1 518 606 +
Chr1	stalkie_big_nohaplotig	CDS	14620519	14620552	100	+	0	ID=FBgn0011206.1.mrna1.cds6;Name=FBgn0011206.1;Parent=FBgn0011206.1.mrna1;Target=FBgn0011206.1 607 640 +
Chr1	stalkie_big_nohaplotig	CDS	14622930	14623000	100	+	1	ID=FBgn0011206.1.mrna1.cds7;Name=FBgn0011206.1;Parent=FBgn0011206.1.mrna1;Target=FBgn0011206.1 641 711 +
Chr1	stalkie_big_nohaplotig	mRNA	14583551	14586909	.	-	.	ID=FBgn0035995.1.mrna1;Name=FBgn0035995.1;Parent=FBgn0035995.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1370;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	14586690	14586909	100	-	.	ID=FBgn0035995.1.mrna1.exon1;Name=FBgn0035995.1;Parent=FBgn0035995.1.mrna1;Target=FBgn0035995.1 1 220 +
Chr1	stalkie_big_nohaplotig	exon	14584574	14585025	100	-	.	ID=FBgn0035995.1.mrna1.exon2;Name=FBgn0035995.1;Parent=FBgn0035995.1.mrna1;Target=FBgn0035995.1 221 672 +
Chr1	stalkie_big_nohaplotig	exon	14584442	14584507	100	-	.	ID=FBgn0035995.1.mrna1.exon3;Name=FBgn0035995.1;Parent=FBgn0035995.1.mrna1;Target=FBgn0035995.1 673 738 +
Chr1	stalkie_big_nohaplotig	exon	14584208	14584377	100	-	.	ID=FBgn0035995.1.mrna1.exon4;Name=FBgn0035995.1;Parent=FBgn0035995.1.mrna1;Target=FBgn0035995.1 739 908 +
Chr1	stalkie_big_nohaplotig	exon	14583838	14584148	99	-	.	ID=FBgn0035995.1.mrna1.exon5;Name=FBgn0035995.1;Parent=FBgn0035995.1.mrna1;Target=FBgn0035995.1 909 1219 +
Chr1	stalkie_big_nohaplotig	exon	14583675	14583759	100	-	.	ID=FBgn0035995.1.mrna1.exon6;Name=FBgn0035995.1;Parent=FBgn0035995.1.mrna1;Target=FBgn0035995.1 1220 1304 +
Chr1	stalkie_big_nohaplotig	exon	14583551	14583617	100	-	.	ID=FBgn0035995.1.mrna1.exon7;Name=FBgn0035995.1;Parent=FBgn0035995.1.mrna1;Target=FBgn0035995.1 1305 1371 +
Chr1	stalkie_big_nohaplotig	CDS	14586690	14586909	100	-	0	ID=FBgn0035995.1.mrna1.cds1;Name=FBgn0035995.1;Parent=FBgn0035995.1.mrna1;Target=FBgn0035995.1 1 220 +
Chr1	stalkie_big_nohaplotig	CDS	14584574	14585025	100	-	1	ID=FBgn0035995.1.mrna1.cds2;Name=FBgn0035995.1;Parent=FBgn0035995.1.mrna1;Target=FBgn0035995.1 221 672 +
Chr1	stalkie_big_nohaplotig	CDS	14584442	14584507	100	-	0	ID=FBgn0035995.1.mrna1.cds3;Name=FBgn0035995.1;Parent=FBgn0035995.1.mrna1;Target=FBgn0035995.1 673 738 +
Chr1	stalkie_big_nohaplotig	CDS	14584208	14584377	100	-	0	ID=FBgn0035995.1.mrna1.cds4;Name=FBgn0035995.1;Parent=FBgn0035995.1.mrna1;Target=FBgn0035995.1 739 908 +
Chr1	stalkie_big_nohaplotig	CDS	14583838	14584148	99	-	2	ID=FBgn0035995.1.mrna1.cds5;Name=FBgn0035995.1;Parent=FBgn0035995.1.mrna1;Target=FBgn0035995.1 909 1219 +
Chr1	stalkie_big_nohaplotig	CDS	14583675	14583759	100	-	1	ID=FBgn0035995.1.mrna1.cds6;Name=FBgn0035995.1;Parent=FBgn0035995.1.mrna1;Target=FBgn0035995.1 1220 1304 +
Chr1	stalkie_big_nohaplotig	CDS	14583551	14583617	100	-	2	ID=FBgn0035995.1.mrna1.cds7;Name=FBgn0035995.1;Parent=FBgn0035995.1.mrna1;Target=FBgn0035995.1 1305 1371 +
Chr1	stalkie_big_nohaplotig	mRNA	123974612	123976123	.	-	.	ID=ORF1049.mrna1;Name=ORF1049;Parent=ORF1049.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1262;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	123976061	123976123	100	-	.	ID=ORF1049.mrna1.exon1;Name=ORF1049;Parent=ORF1049.mrna1;Target=ORF1049 1 63 +
Chr1	stalkie_big_nohaplotig	exon	123975486	123975997	99	-	.	ID=ORF1049.mrna1.exon2;Name=ORF1049;Parent=ORF1049.mrna1;Target=ORF1049 64 575 +
Chr1	stalkie_big_nohaplotig	exon	123974612	123975299	100	-	.	ID=ORF1049.mrna1.exon3;Name=ORF1049;Parent=ORF1049.mrna1;Target=ORF1049 576 1263 +
Chr1	stalkie_big_nohaplotig	CDS	123976061	123976123	100	-	0	ID=ORF1049.mrna1.cds1;Name=ORF1049;Parent=ORF1049.mrna1;Target=ORF1049 1 63 +
Chr1	stalkie_big_nohaplotig	CDS	123975486	123975997	99	-	0	ID=ORF1049.mrna1.cds2;Name=ORF1049;Parent=ORF1049.mrna1;Target=ORF1049 64 575 +
Chr1	stalkie_big_nohaplotig	CDS	123974612	123975299	100	-	2	ID=ORF1049.mrna1.cds3;Name=ORF1049;Parent=ORF1049.mrna1;Target=ORF1049 576 1263 +
Chr1	stalkie_big_nohaplotig	mRNA	123895184	123896961	.	+	.	ID=FBgn0023516.1.mrna1;Name=FBgn0023516.1;Parent=FBgn0023516.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=1695;mismatches=9;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	123895184	123895750	99	+	.	ID=FBgn0023516.1.mrna1.exon1;Name=FBgn0023516.1;Parent=FBgn0023516.1.mrna1;Target=FBgn0023516.1 1 567 +
Chr1	stalkie_big_nohaplotig	exon	123895825	123896961	99	+	.	ID=FBgn0023516.1.mrna1.exon2;Name=FBgn0023516.1;Parent=FBgn0023516.1.mrna1;Target=FBgn0023516.1 568 1704 +
Chr1	stalkie_big_nohaplotig	CDS	123895184	123895750	99	+	0	ID=FBgn0023516.1.mrna1.cds1;Name=FBgn0023516.1;Parent=FBgn0023516.1.mrna1;Target=FBgn0023516.1 1 567 +
Chr1	stalkie_big_nohaplotig	CDS	123895825	123896961	99	+	0	ID=FBgn0023516.1.mrna1.cds2;Name=FBgn0023516.1;Parent=FBgn0023516.1.mrna1;Target=FBgn0023516.1 568 1704 +
Chr1	stalkie_big_nohaplotig	mRNA	123903355	123906516	.	-	.	ID=FBgn0030974.1.mrna1;Name=FBgn0030974.1;Parent=FBgn0030974.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2977;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	123905498	123906516	100	-	.	ID=FBgn0030974.1.mrna1.exon1;Name=FBgn0030974.1;Parent=FBgn0030974.1.mrna1;Target=FBgn0030974.1 1 1019 +
Chr1	stalkie_big_nohaplotig	exon	123904534	123905441	99	-	.	ID=FBgn0030974.1.mrna1.exon2;Name=FBgn0030974.1;Parent=FBgn0030974.1.mrna1;Target=FBgn0030974.1 1020 1927 +
Chr1	stalkie_big_nohaplotig	exon	123904047	123904469	99	-	.	ID=FBgn0030974.1.mrna1.exon3;Name=FBgn0030974.1;Parent=FBgn0030974.1.mrna1;Target=FBgn0030974.1 1928 2350 +
Chr1	stalkie_big_nohaplotig	exon	123903355	123903986	99	-	.	ID=FBgn0030974.1.mrna1.exon4;Name=FBgn0030974.1;Parent=FBgn0030974.1.mrna1;Target=FBgn0030974.1 2351 2982 +
Chr1	stalkie_big_nohaplotig	CDS	123905498	123906516	100	-	0	ID=FBgn0030974.1.mrna1.cds1;Name=FBgn0030974.1;Parent=FBgn0030974.1.mrna1;Target=FBgn0030974.1 1 1019 +
Chr1	stalkie_big_nohaplotig	CDS	123904534	123905441	99	-	2	ID=FBgn0030974.1.mrna1.cds2;Name=FBgn0030974.1;Parent=FBgn0030974.1.mrna1;Target=FBgn0030974.1 1020 1927 +
Chr1	stalkie_big_nohaplotig	CDS	123904047	123904469	99	-	1	ID=FBgn0030974.1.mrna1.cds3;Name=FBgn0030974.1;Parent=FBgn0030974.1.mrna1;Target=FBgn0030974.1 1928 2350 +
Chr1	stalkie_big_nohaplotig	CDS	123903355	123903986	99	-	1	ID=FBgn0030974.1.mrna1.cds4;Name=FBgn0030974.1;Parent=FBgn0030974.1.mrna1;Target=FBgn0030974.1 2351 2982 +
Chr2	stalkie_big_nohaplotig	mRNA	129393399	129394751	.	+	.	ID=ORF908.mrna1;Name=ORF908;Parent=ORF908.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1353;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	129393399	129394751	100	+	.	ID=ORF908.mrna1.exon1;Name=ORF908;Parent=ORF908.mrna1;Target=ORF908 1353 1 .
Chr2	stalkie_big_nohaplotig	CDS	129393399	129394751	100	+	0	ID=ORF908.mrna1.cds1;Name=ORF908;Parent=ORF908.mrna1;Target=ORF908 1353 1 .
ChrX	stalkie_big_nohaplotig	mRNA	50435170	50436860	.	-	.	ID=ORF726.mrna1;Name=ORF726;Parent=ORF726.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1482;mismatches=3;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	50436848	50436860	100	-	.	ID=ORF726.mrna1.exon1;Name=ORF726;Parent=ORF726.mrna1;Target=ORF726 1 13 +
ChrX	stalkie_big_nohaplotig	exon	50435170	50436641	99	-	.	ID=ORF726.mrna1.exon2;Name=ORF726;Parent=ORF726.mrna1;Target=ORF726 14 1485 +
ChrX	stalkie_big_nohaplotig	CDS	50436848	50436860	100	-	0	ID=ORF726.mrna1.cds1;Name=ORF726;Parent=ORF726.mrna1;Target=ORF726 1 13 +
ChrX	stalkie_big_nohaplotig	CDS	50435170	50436641	99	-	1	ID=ORF726.mrna1.cds2;Name=ORF726;Parent=ORF726.mrna1;Target=ORF726 14 1485 +
ChrX	stalkie_big_nohaplotig	mRNA	50505278	50508546	.	+	.	ID=ORF1625.mrna1;Name=ORF1625;Parent=ORF1625.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1041;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	50505278	50505500	100	+	.	ID=ORF1625.mrna1.exon1;Name=ORF1625;Parent=ORF1625.mrna1;Target=ORF1625 1 223 +
ChrX	stalkie_big_nohaplotig	exon	50505582	50505652	100	+	.	ID=ORF1625.mrna1.exon2;Name=ORF1625;Parent=ORF1625.mrna1;Target=ORF1625 224 294 +
ChrX	stalkie_big_nohaplotig	exon	50507666	50507725	100	+	.	ID=ORF1625.mrna1.exon3;Name=ORF1625;Parent=ORF1625.mrna1;Target=ORF1625 295 354 +
ChrX	stalkie_big_nohaplotig	exon	50507790	50508282	100	+	.	ID=ORF1625.mrna1.exon4;Name=ORF1625;Parent=ORF1625.mrna1;Target=ORF1625 355 847 +
ChrX	stalkie_big_nohaplotig	exon	50508353	50508546	100	+	.	ID=ORF1625.mrna1.exon5;Name=ORF1625;Parent=ORF1625.mrna1;Target=ORF1625 848 1041 +
ChrX	stalkie_big_nohaplotig	CDS	50505278	50505500	100	+	0	ID=ORF1625.mrna1.cds1;Name=ORF1625;Parent=ORF1625.mrna1;Target=ORF1625 1 223 +
ChrX	stalkie_big_nohaplotig	CDS	50505582	50505652	100	+	1	ID=ORF1625.mrna1.cds2;Name=ORF1625;Parent=ORF1625.mrna1;Target=ORF1625 224 294 +
ChrX	stalkie_big_nohaplotig	CDS	50507666	50507725	100	+	0	ID=ORF1625.mrna1.cds3;Name=ORF1625;Parent=ORF1625.mrna1;Target=ORF1625 295 354 +
ChrX	stalkie_big_nohaplotig	CDS	50507790	50508282	100	+	0	ID=ORF1625.mrna1.cds4;Name=ORF1625;Parent=ORF1625.mrna1;Target=ORF1625 355 847 +
ChrX	stalkie_big_nohaplotig	CDS	50508353	50508546	100	+	1	ID=ORF1625.mrna1.cds5;Name=ORF1625;Parent=ORF1625.mrna1;Target=ORF1625 848 1041 +
ChrX	stalkie_big_nohaplotig	mRNA	3979209	3981530	.	+	.	ID=ORF257.mrna1;Name=ORF257;Parent=ORF257.path1;Dir=sensecoverage=100.0;identity=98.7;matches=2201;mismatches=28;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	3979209	3981402	98	+	.	ID=ORF257.mrna1.exon1;Name=ORF257;Parent=ORF257.mrna1;Target=ORF257 1 2194 +
ChrX	stalkie_big_nohaplotig	exon	3981496	3981530	100	+	.	ID=ORF257.mrna1.exon2;Name=ORF257;Parent=ORF257.mrna1;Target=ORF257 2195 2229 +
ChrX	stalkie_big_nohaplotig	CDS	3979209	3981402	98	+	0	ID=ORF257.mrna1.cds1;Name=ORF257;Parent=ORF257.mrna1;Target=ORF257 1 2194 +
ChrX	stalkie_big_nohaplotig	CDS	3981496	3981530	100	+	1	ID=ORF257.mrna1.cds2;Name=ORF257;Parent=ORF257.mrna1;Target=ORF257 2195 2229 +
Chr2	stalkie_big_nohaplotig	mRNA	122503406	122942284	.	-	.	ID=ORF37.mrna1;Name=ORF37;Parent=ORF37.path1;Dir=sensecoverage=99.5;identity=99.5;matches=3658;mismatches=17;indels=0;unknowns=14
Chr2	stalkie_big_nohaplotig	exon	122942078	122942284	99	-	.	ID=ORF37.mrna1.exon1;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 20 226 +
Chr2	stalkie_big_nohaplotig	exon	122941782	122942003	98	-	.	ID=ORF37.mrna1.exon2;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 227 448 +
Chr2	stalkie_big_nohaplotig	exon	122941526	122941687	99	-	.	ID=ORF37.mrna1.exon3;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 449 610 +
Chr2	stalkie_big_nohaplotig	exon	122941256	122941450	97	-	.	ID=ORF37.mrna1.exon4;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 611 805 +
Chr2	stalkie_big_nohaplotig	exon	122940855	122941004	100	-	.	ID=ORF37.mrna1.exon5;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 806 955 +
Chr2	stalkie_big_nohaplotig	exon	122940631	122940783	100	-	.	ID=ORF37.mrna1.exon6;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 956 1108 +
Chr2	stalkie_big_nohaplotig	exon	122940209	122940571	99	-	.	ID=ORF37.mrna1.exon7;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 1109 1471 +
Chr2	stalkie_big_nohaplotig	exon	122940005	122940154	100	-	.	ID=ORF37.mrna1.exon8;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 1472 1621 +
Chr2	stalkie_big_nohaplotig	exon	122939740	122939949	100	-	.	ID=ORF37.mrna1.exon9;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 1622 1831 +
Chr2	stalkie_big_nohaplotig	exon	122939531	122939683	100	-	.	ID=ORF37.mrna1.exon10;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 1832 1984 +
Chr2	stalkie_big_nohaplotig	exon	122939407	122939473	100	-	.	ID=ORF37.mrna1.exon11;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 1985 2051 +
Chr2	stalkie_big_nohaplotig	exon	122936877	122936983	100	-	.	ID=ORF37.mrna1.exon12;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 2052 2158 +
Chr2	stalkie_big_nohaplotig	exon	122936646	122936807	100	-	.	ID=ORF37.mrna1.exon13;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 2159 2320 +
Chr2	stalkie_big_nohaplotig	exon	122936565	122936589	100	-	.	ID=ORF37.mrna1.exon14;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 2321 2345 +
Chr2	stalkie_big_nohaplotig	exon	122933999	122934141	99	-	.	ID=ORF37.mrna1.exon15;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 2346 2488 +
Chr2	stalkie_big_nohaplotig	exon	122933784	122933933	99	-	.	ID=ORF37.mrna1.exon16;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 2489 2638 +
Chr2	stalkie_big_nohaplotig	exon	122933549	122933731	100	-	.	ID=ORF37.mrna1.exon17;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 2639 2821 +
Chr2	stalkie_big_nohaplotig	exon	122504442	122504591	100	-	.	ID=ORF37.mrna1.exon18;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 2822 2971 +
Chr2	stalkie_big_nohaplotig	exon	122504204	122504374	100	-	.	ID=ORF37.mrna1.exon19;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 2972 3142 +
Chr2	stalkie_big_nohaplotig	exon	122503971	122504147	99	-	.	ID=ORF37.mrna1.exon20;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 3143 3319 +
Chr2	stalkie_big_nohaplotig	exon	122503756	122503914	100	-	.	ID=ORF37.mrna1.exon21;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 3320 3478 +
Chr2	stalkie_big_nohaplotig	exon	122503531	122503695	97	-	.	ID=ORF37.mrna1.exon22;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 3479 3643 +
Chr2	stalkie_big_nohaplotig	exon	122503406	122503470	100	-	.	ID=ORF37.mrna1.exon23;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 3644 3708 +
Chr2	stalkie_big_nohaplotig	CDS	122942078	122942282	99	-	0	ID=ORF37.mrna1.cds1;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 22 226 +
Chr2	stalkie_big_nohaplotig	CDS	122941782	122942003	98	-	1	ID=ORF37.mrna1.cds2;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 227 448 +
Chr2	stalkie_big_nohaplotig	CDS	122941526	122941687	99	-	1	ID=ORF37.mrna1.cds3;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 449 610 +
Chr2	stalkie_big_nohaplotig	CDS	122941256	122941450	97	-	1	ID=ORF37.mrna1.cds4;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 611 805 +
Chr2	stalkie_big_nohaplotig	CDS	122940855	122941004	100	-	1	ID=ORF37.mrna1.cds5;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 806 955 +
Chr2	stalkie_big_nohaplotig	CDS	122940631	122940783	100	-	1	ID=ORF37.mrna1.cds6;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 956 1108 +
Chr2	stalkie_big_nohaplotig	CDS	122940209	122940571	99	-	1	ID=ORF37.mrna1.cds7;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 1109 1471 +
Chr2	stalkie_big_nohaplotig	CDS	122940005	122940154	100	-	1	ID=ORF37.mrna1.cds8;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 1472 1621 +
Chr2	stalkie_big_nohaplotig	CDS	122939740	122939949	100	-	1	ID=ORF37.mrna1.cds9;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 1622 1831 +
Chr2	stalkie_big_nohaplotig	CDS	122939531	122939683	100	-	1	ID=ORF37.mrna1.cds10;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 1832 1984 +
Chr2	stalkie_big_nohaplotig	CDS	122939407	122939473	100	-	1	ID=ORF37.mrna1.cds11;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 1985 2051 +
Chr2	stalkie_big_nohaplotig	CDS	122936877	122936983	100	-	2	ID=ORF37.mrna1.cds12;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 2052 2158 +
Chr2	stalkie_big_nohaplotig	CDS	122936646	122936807	100	-	1	ID=ORF37.mrna1.cds13;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 2159 2320 +
Chr2	stalkie_big_nohaplotig	CDS	122936565	122936589	100	-	1	ID=ORF37.mrna1.cds14;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 2321 2345 +
Chr2	stalkie_big_nohaplotig	CDS	122933999	122934141	99	-	2	ID=ORF37.mrna1.cds15;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 2346 2488 +
Chr2	stalkie_big_nohaplotig	CDS	122933784	122933933	99	-	1	ID=ORF37.mrna1.cds16;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 2489 2638 +
Chr2	stalkie_big_nohaplotig	CDS	122933549	122933731	100	-	1	ID=ORF37.mrna1.cds17;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 2639 2821 +
Chr2	stalkie_big_nohaplotig	CDS	122504442	122504591	100	-	1	ID=ORF37.mrna1.cds18;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 2822 2971 +
Chr2	stalkie_big_nohaplotig	CDS	122504204	122504374	100	-	1	ID=ORF37.mrna1.cds19;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 2972 3142 +
Chr2	stalkie_big_nohaplotig	CDS	122503971	122504147	99	-	1	ID=ORF37.mrna1.cds20;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 3143 3319 +
Chr2	stalkie_big_nohaplotig	CDS	122503756	122503914	100	-	1	ID=ORF37.mrna1.cds21;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 3320 3478 +
Chr2	stalkie_big_nohaplotig	CDS	122503531	122503695	97	-	1	ID=ORF37.mrna1.cds22;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 3479 3643 +
Chr2	stalkie_big_nohaplotig	CDS	122503406	122503470	100	-	1	ID=ORF37.mrna1.cds23;Name=ORF37;Parent=ORF37.mrna1;Target=ORF37 3644 3708 +
Chr2	stalkie_big_nohaplotig	mRNA	156063879	156066867	.	-	.	ID=FBgn0001169.1.mrna1;Name=FBgn0001169.1;Parent=FBgn0001169.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2811;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	156066027	156066867	100	-	.	ID=FBgn0001169.1.mrna1.exon1;Name=FBgn0001169.1;Parent=FBgn0001169.1.mrna1;Target=FBgn0001169.1 1 841 +
Chr2	stalkie_big_nohaplotig	exon	156065798	156065968	100	-	.	ID=FBgn0001169.1.mrna1.exon2;Name=FBgn0001169.1;Parent=FBgn0001169.1.mrna1;Target=FBgn0001169.1 842 1012 +
Chr2	stalkie_big_nohaplotig	exon	156064865	156065742	100	-	.	ID=FBgn0001169.1.mrna1.exon3;Name=FBgn0001169.1;Parent=FBgn0001169.1.mrna1;Target=FBgn0001169.1 1013 1890 +
Chr2	stalkie_big_nohaplotig	exon	156063879	156064799	100	-	.	ID=FBgn0001169.1.mrna1.exon4;Name=FBgn0001169.1;Parent=FBgn0001169.1.mrna1;Target=FBgn0001169.1 1891 2811 +
Chr2	stalkie_big_nohaplotig	CDS	156066027	156066867	100	-	0	ID=FBgn0001169.1.mrna1.cds1;Name=FBgn0001169.1;Parent=FBgn0001169.1.mrna1;Target=FBgn0001169.1 1 841 +
Chr2	stalkie_big_nohaplotig	CDS	156065798	156065968	100	-	1	ID=FBgn0001169.1.mrna1.cds2;Name=FBgn0001169.1;Parent=FBgn0001169.1.mrna1;Target=FBgn0001169.1 842 1012 +
Chr2	stalkie_big_nohaplotig	CDS	156064865	156065742	100	-	1	ID=FBgn0001169.1.mrna1.cds3;Name=FBgn0001169.1;Parent=FBgn0001169.1.mrna1;Target=FBgn0001169.1 1013 1890 +
Chr2	stalkie_big_nohaplotig	CDS	156063879	156064799	100	-	0	ID=FBgn0001169.1.mrna1.cds4;Name=FBgn0001169.1;Parent=FBgn0001169.1.mrna1;Target=FBgn0001169.1 1891 2811 +
Chr2	stalkie_big_nohaplotig	mRNA	156105173	156113317	.	-	.	ID=FBgn0262717.1.mrna1;Name=FBgn0262717.1;Parent=FBgn0262717.1.path1;Dir=sensecoverage=98.4;identity=100.0;matches=4348;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	156113168	156113317	100	-	.	ID=FBgn0262717.1.mrna1.exon1;Name=FBgn0262717.1;Parent=FBgn0262717.1.mrna1;Target=FBgn0262717.1 71 220 +
Chr2	stalkie_big_nohaplotig	exon	156112642	156112992	100	-	.	ID=FBgn0262717.1.mrna1.exon2;Name=FBgn0262717.1;Parent=FBgn0262717.1.mrna1;Target=FBgn0262717.1 221 571 +
Chr2	stalkie_big_nohaplotig	exon	156111508	156111767	100	-	.	ID=FBgn0262717.1.mrna1.exon3;Name=FBgn0262717.1;Parent=FBgn0262717.1.mrna1;Target=FBgn0262717.1 572 831 +
Chr2	stalkie_big_nohaplotig	exon	156110529	156110628	100	-	.	ID=FBgn0262717.1.mrna1.exon4;Name=FBgn0262717.1;Parent=FBgn0262717.1.mrna1;Target=FBgn0262717.1 832 931 +
Chr2	stalkie_big_nohaplotig	exon	156108667	156108851	100	-	.	ID=FBgn0262717.1.mrna1.exon5;Name=FBgn0262717.1;Parent=FBgn0262717.1.mrna1;Target=FBgn0262717.1 932 1116 +
Chr2	stalkie_big_nohaplotig	exon	156108004	156108610	100	-	.	ID=FBgn0262717.1.mrna1.exon6;Name=FBgn0262717.1;Parent=FBgn0262717.1.mrna1;Target=FBgn0262717.1 1117 1723 +
Chr2	stalkie_big_nohaplotig	exon	156107733	156107926	100	-	.	ID=FBgn0262717.1.mrna1.exon7;Name=FBgn0262717.1;Parent=FBgn0262717.1.mrna1;Target=FBgn0262717.1 1724 1917 +
Chr2	stalkie_big_nohaplotig	exon	156105173	156107674	99	-	.	ID=FBgn0262717.1.mrna1.exon8;Name=FBgn0262717.1;Parent=FBgn0262717.1.mrna1;Target=FBgn0262717.1 1918 4419 +
Chr2	stalkie_big_nohaplotig	CDS	156113168	156113315	100	-	0	ID=FBgn0262717.1.mrna1.cds1;Name=FBgn0262717.1;Parent=FBgn0262717.1.mrna1;Target=FBgn0262717.1 73 220 +
Chr2	stalkie_big_nohaplotig	CDS	156112642	156112992	100	-	1	ID=FBgn0262717.1.mrna1.cds2;Name=FBgn0262717.1;Parent=FBgn0262717.1.mrna1;Target=FBgn0262717.1 221 571 +
Chr2	stalkie_big_nohaplotig	CDS	156111508	156111767	100	-	1	ID=FBgn0262717.1.mrna1.cds3;Name=FBgn0262717.1;Parent=FBgn0262717.1.mrna1;Target=FBgn0262717.1 572 831 +
Chr2	stalkie_big_nohaplotig	CDS	156110529	156110628	100	-	0	ID=FBgn0262717.1.mrna1.cds4;Name=FBgn0262717.1;Parent=FBgn0262717.1.mrna1;Target=FBgn0262717.1 832 931 +
Chr2	stalkie_big_nohaplotig	CDS	156108667	156108851	100	-	1	ID=FBgn0262717.1.mrna1.cds5;Name=FBgn0262717.1;Parent=FBgn0262717.1.mrna1;Target=FBgn0262717.1 932 1116 +
Chr2	stalkie_big_nohaplotig	CDS	156108004	156108610	100	-	0	ID=FBgn0262717.1.mrna1.cds6;Name=FBgn0262717.1;Parent=FBgn0262717.1.mrna1;Target=FBgn0262717.1 1117 1723 +
Chr2	stalkie_big_nohaplotig	CDS	156107733	156107926	100	-	1	ID=FBgn0262717.1.mrna1.cds7;Name=FBgn0262717.1;Parent=FBgn0262717.1.mrna1;Target=FBgn0262717.1 1724 1917 +
Chr2	stalkie_big_nohaplotig	CDS	156105173	156107674	99	-	0	ID=FBgn0262717.1.mrna1.cds8;Name=FBgn0262717.1;Parent=FBgn0262717.1.mrna1;Target=FBgn0262717.1 1918 4419 +
Chr2	stalkie_big_nohaplotig	mRNA	155791931	155795686	.	+	.	ID=FBgn0051195.1.mrna1;Name=FBgn0051195.1;Parent=FBgn0051195.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=2439;mismatches=9;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	155791931	155792871	99	+	.	ID=FBgn0051195.1.mrna1.exon1;Name=FBgn0051195.1;Parent=FBgn0051195.1.mrna1;Target=FBgn0051195.1 1 941 +
Chr2	stalkie_big_nohaplotig	exon	155792939	155793234	100	+	.	ID=FBgn0051195.1.mrna1.exon2;Name=FBgn0051195.1;Parent=FBgn0051195.1.mrna1;Target=FBgn0051195.1 942 1237 +
Chr2	stalkie_big_nohaplotig	exon	155793308	155793488	100	+	.	ID=FBgn0051195.1.mrna1.exon3;Name=FBgn0051195.1;Parent=FBgn0051195.1.mrna1;Target=FBgn0051195.1 1238 1418 +
Chr2	stalkie_big_nohaplotig	exon	155793556	155793673	100	+	.	ID=FBgn0051195.1.mrna1.exon4;Name=FBgn0051195.1;Parent=FBgn0051195.1.mrna1;Target=FBgn0051195.1 1419 1536 +
Chr2	stalkie_big_nohaplotig	exon	155794268	155794797	99	+	.	ID=FBgn0051195.1.mrna1.exon5;Name=FBgn0051195.1;Parent=FBgn0051195.1.mrna1;Target=FBgn0051195.1 1537 2066 +
Chr2	stalkie_big_nohaplotig	exon	155795224	155795341	99	+	.	ID=FBgn0051195.1.mrna1.exon6;Name=FBgn0051195.1;Parent=FBgn0051195.1.mrna1;Target=FBgn0051195.1 2067 2184 +
Chr2	stalkie_big_nohaplotig	exon	155795423	155795686	99	+	.	ID=FBgn0051195.1.mrna1.exon7;Name=FBgn0051195.1;Parent=FBgn0051195.1.mrna1;Target=FBgn0051195.1 2185 2448 +
Chr2	stalkie_big_nohaplotig	CDS	155791931	155792871	99	+	0	ID=FBgn0051195.1.mrna1.cds1;Name=FBgn0051195.1;Parent=FBgn0051195.1.mrna1;Target=FBgn0051195.1 1 941 +
Chr2	stalkie_big_nohaplotig	CDS	155792939	155793234	100	+	2	ID=FBgn0051195.1.mrna1.cds2;Name=FBgn0051195.1;Parent=FBgn0051195.1.mrna1;Target=FBgn0051195.1 942 1237 +
Chr2	stalkie_big_nohaplotig	CDS	155793308	155793488	100	+	1	ID=FBgn0051195.1.mrna1.cds3;Name=FBgn0051195.1;Parent=FBgn0051195.1.mrna1;Target=FBgn0051195.1 1238 1418 +
Chr2	stalkie_big_nohaplotig	CDS	155793556	155793673	100	+	2	ID=FBgn0051195.1.mrna1.cds4;Name=FBgn0051195.1;Parent=FBgn0051195.1.mrna1;Target=FBgn0051195.1 1419 1536 +
Chr2	stalkie_big_nohaplotig	CDS	155794268	155794797	99	+	0	ID=FBgn0051195.1.mrna1.cds5;Name=FBgn0051195.1;Parent=FBgn0051195.1.mrna1;Target=FBgn0051195.1 1537 2066 +
Chr2	stalkie_big_nohaplotig	CDS	155795224	155795341	99	+	2	ID=FBgn0051195.1.mrna1.cds6;Name=FBgn0051195.1;Parent=FBgn0051195.1.mrna1;Target=FBgn0051195.1 2067 2184 +
Chr2	stalkie_big_nohaplotig	CDS	155795423	155795686	99	+	0	ID=FBgn0051195.1.mrna1.cds7;Name=FBgn0051195.1;Parent=FBgn0051195.1.mrna1;Target=FBgn0051195.1 2185 2448 +
Chr1	stalkie_big_nohaplotig	mRNA	34518189	34518858	.	+	.	ID=FBgn0035528.1.mrna1;Name=FBgn0035528.1;Parent=FBgn0035528.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=492;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	34518189	34518311	100	+	.	ID=FBgn0035528.1.mrna1.exon1;Name=FBgn0035528.1;Parent=FBgn0035528.1.mrna1;Target=FBgn0035528.1 1 123 +
Chr1	stalkie_big_nohaplotig	exon	34518378	34518512	100	+	.	ID=FBgn0035528.1.mrna1.exon2;Name=FBgn0035528.1;Parent=FBgn0035528.1.mrna1;Target=FBgn0035528.1 124 258 +
Chr1	stalkie_big_nohaplotig	exon	34518570	34518696	100	+	.	ID=FBgn0035528.1.mrna1.exon3;Name=FBgn0035528.1;Parent=FBgn0035528.1.mrna1;Target=FBgn0035528.1 259 385 +
Chr1	stalkie_big_nohaplotig	exon	34518752	34518858	100	+	.	ID=FBgn0035528.1.mrna1.exon4;Name=FBgn0035528.1;Parent=FBgn0035528.1.mrna1;Target=FBgn0035528.1 386 492 +
Chr1	stalkie_big_nohaplotig	CDS	34518189	34518311	100	+	0	ID=FBgn0035528.1.mrna1.cds1;Name=FBgn0035528.1;Parent=FBgn0035528.1.mrna1;Target=FBgn0035528.1 1 123 +
Chr1	stalkie_big_nohaplotig	CDS	34518378	34518512	100	+	0	ID=FBgn0035528.1.mrna1.cds2;Name=FBgn0035528.1;Parent=FBgn0035528.1.mrna1;Target=FBgn0035528.1 124 258 +
Chr1	stalkie_big_nohaplotig	CDS	34518570	34518696	100	+	0	ID=FBgn0035528.1.mrna1.cds3;Name=FBgn0035528.1;Parent=FBgn0035528.1.mrna1;Target=FBgn0035528.1 259 385 +
Chr1	stalkie_big_nohaplotig	CDS	34518752	34518858	100	+	1	ID=FBgn0035528.1.mrna1.cds4;Name=FBgn0035528.1;Parent=FBgn0035528.1.mrna1;Target=FBgn0035528.1 386 492 +
Chr2	stalkie_big_nohaplotig	mRNA	157906268	157909812	.	-	.	ID=FBgn0039640.1.mrna1;Name=FBgn0039640.1;Parent=FBgn0039640.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=3051;mismatches=6;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	157909046	157909812	100	-	.	ID=FBgn0039640.1.mrna1.exon1;Name=FBgn0039640.1;Parent=FBgn0039640.1.mrna1;Target=FBgn0039640.1 1 767 +
Chr2	stalkie_big_nohaplotig	exon	157908823	157908978	100	-	.	ID=FBgn0039640.1.mrna1.exon2;Name=FBgn0039640.1;Parent=FBgn0039640.1.mrna1;Target=FBgn0039640.1 768 923 +
Chr2	stalkie_big_nohaplotig	exon	157908475	157908768	100	-	.	ID=FBgn0039640.1.mrna1.exon3;Name=FBgn0039640.1;Parent=FBgn0039640.1.mrna1;Target=FBgn0039640.1 924 1217 +
Chr2	stalkie_big_nohaplotig	exon	157907990	157908412	99	-	.	ID=FBgn0039640.1.mrna1.exon4;Name=FBgn0039640.1;Parent=FBgn0039640.1.mrna1;Target=FBgn0039640.1 1218 1640 +
Chr2	stalkie_big_nohaplotig	exon	157907195	157907870	99	-	.	ID=FBgn0039640.1.mrna1.exon5;Name=FBgn0039640.1;Parent=FBgn0039640.1.mrna1;Target=FBgn0039640.1 1641 2316 +
Chr2	stalkie_big_nohaplotig	exon	157906934	157907139	100	-	.	ID=FBgn0039640.1.mrna1.exon6;Name=FBgn0039640.1;Parent=FBgn0039640.1.mrna1;Target=FBgn0039640.1 2317 2522 +
Chr2	stalkie_big_nohaplotig	exon	157906551	157906859	99	-	.	ID=FBgn0039640.1.mrna1.exon7;Name=FBgn0039640.1;Parent=FBgn0039640.1.mrna1;Target=FBgn0039640.1 2523 2831 +
Chr2	stalkie_big_nohaplotig	exon	157906268	157906493	100	-	.	ID=FBgn0039640.1.mrna1.exon8;Name=FBgn0039640.1;Parent=FBgn0039640.1.mrna1;Target=FBgn0039640.1 2832 3057 +
Chr2	stalkie_big_nohaplotig	CDS	157909046	157909812	100	-	0	ID=FBgn0039640.1.mrna1.cds1;Name=FBgn0039640.1;Parent=FBgn0039640.1.mrna1;Target=FBgn0039640.1 1 767 +
Chr2	stalkie_big_nohaplotig	CDS	157908823	157908978	100	-	2	ID=FBgn0039640.1.mrna1.cds2;Name=FBgn0039640.1;Parent=FBgn0039640.1.mrna1;Target=FBgn0039640.1 768 923 +
Chr2	stalkie_big_nohaplotig	CDS	157908475	157908768	100	-	2	ID=FBgn0039640.1.mrna1.cds3;Name=FBgn0039640.1;Parent=FBgn0039640.1.mrna1;Target=FBgn0039640.1 924 1217 +
Chr2	stalkie_big_nohaplotig	CDS	157907990	157908412	99	-	2	ID=FBgn0039640.1.mrna1.cds4;Name=FBgn0039640.1;Parent=FBgn0039640.1.mrna1;Target=FBgn0039640.1 1218 1640 +
Chr2	stalkie_big_nohaplotig	CDS	157907195	157907870	99	-	2	ID=FBgn0039640.1.mrna1.cds5;Name=FBgn0039640.1;Parent=FBgn0039640.1.mrna1;Target=FBgn0039640.1 1641 2316 +
Chr2	stalkie_big_nohaplotig	CDS	157906934	157907139	100	-	0	ID=FBgn0039640.1.mrna1.cds6;Name=FBgn0039640.1;Parent=FBgn0039640.1.mrna1;Target=FBgn0039640.1 2317 2522 +
Chr2	stalkie_big_nohaplotig	CDS	157906551	157906859	99	-	2	ID=FBgn0039640.1.mrna1.cds7;Name=FBgn0039640.1;Parent=FBgn0039640.1.mrna1;Target=FBgn0039640.1 2523 2831 +
Chr2	stalkie_big_nohaplotig	CDS	157906268	157906493	100	-	2	ID=FBgn0039640.1.mrna1.cds8;Name=FBgn0039640.1;Parent=FBgn0039640.1.mrna1;Target=FBgn0039640.1 2832 3057 +
Chr2	stalkie_big_nohaplotig	mRNA	103417224	103418561	.	-	.	ID=FBgn0011481.1.mrna1;Name=FBgn0011481.1;Parent=FBgn0011481.1.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1337;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	103417224	103418561	99	-	.	ID=FBgn0011481.1.mrna1.exon1;Name=FBgn0011481.1;Parent=FBgn0011481.1.mrna1;Target=FBgn0011481.1 1338 1 .
Chr2	stalkie_big_nohaplotig	CDS	103417224	103418561	99	-	0	ID=FBgn0011481.1.mrna1.cds1;Name=FBgn0011481.1;Parent=FBgn0011481.1.mrna1;Target=FBgn0011481.1 1338 1 .
Chr1	stalkie_big_nohaplotig	mRNA	128609611	128611056	.	-	.	ID=ORF767.mrna1;Name=ORF767;Parent=ORF767.path1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1436;mismatches=10;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	128609611	128611056	99	-	.	ID=ORF767.mrna1.exon1;Name=ORF767;Parent=ORF767.mrna1;Target=ORF767 1446 1 .
Chr1	stalkie_big_nohaplotig	CDS	128609611	128611056	99	-	0	ID=ORF767.mrna1.cds1;Name=ORF767;Parent=ORF767.mrna1;Target=ORF767 1446 1 .
Chr1	stalkie_big_nohaplotig	mRNA	128649965	128657164	.	+	.	ID=FBgn0040877.1.mrna1;Name=FBgn0040877.1;Parent=FBgn0040877.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=218;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	128649965	128650037	100	+	.	ID=FBgn0040877.1.mrna1.exon1;Name=FBgn0040877.1;Parent=FBgn0040877.1.mrna1;Target=FBgn0040877.1 1 73 +
Chr1	stalkie_big_nohaplotig	exon	128657019	128657164	99	+	.	ID=FBgn0040877.1.mrna1.exon2;Name=FBgn0040877.1;Parent=FBgn0040877.1.mrna1;Target=FBgn0040877.1 74 219 +
Chr1	stalkie_big_nohaplotig	CDS	128649965	128650037	100	+	0	ID=FBgn0040877.1.mrna1.cds1;Name=FBgn0040877.1;Parent=FBgn0040877.1.mrna1;Target=FBgn0040877.1 1 73 +
Chr1	stalkie_big_nohaplotig	CDS	128657019	128657164	99	+	1	ID=FBgn0040877.1.mrna1.cds2;Name=FBgn0040877.1;Parent=FBgn0040877.1.mrna1;Target=FBgn0040877.1 74 219 +
Chr2	stalkie_big_nohaplotig	mRNA	152518044	152521244	.	-	.	ID=FBgn0039560.1.mrna1;Name=FBgn0039560.1;Parent=FBgn0039560.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=2842;mismatches=8;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	152520970	152521244	99	-	.	ID=FBgn0039560.1.mrna1.exon1;Name=FBgn0039560.1;Parent=FBgn0039560.1.mrna1;Target=FBgn0039560.1 1 275 +
Chr2	stalkie_big_nohaplotig	exon	152520122	152520918	100	-	.	ID=FBgn0039560.1.mrna1.exon2;Name=FBgn0039560.1;Parent=FBgn0039560.1.mrna1;Target=FBgn0039560.1 276 1072 +
Chr2	stalkie_big_nohaplotig	exon	152518842	152520059	99	-	.	ID=FBgn0039560.1.mrna1.exon3;Name=FBgn0039560.1;Parent=FBgn0039560.1.mrna1;Target=FBgn0039560.1 1073 2290 +
Chr2	stalkie_big_nohaplotig	exon	152518257	152518781	98	-	.	ID=FBgn0039560.1.mrna1.exon4;Name=FBgn0039560.1;Parent=FBgn0039560.1.mrna1;Target=FBgn0039560.1 2291 2815 +
Chr2	stalkie_big_nohaplotig	exon	152518044	152518078	100	-	.	ID=FBgn0039560.1.mrna1.exon5;Name=FBgn0039560.1;Parent=FBgn0039560.1.mrna1;Target=FBgn0039560.1 2816 2850 +
Chr2	stalkie_big_nohaplotig	CDS	152520970	152521244	99	-	0	ID=FBgn0039560.1.mrna1.cds1;Name=FBgn0039560.1;Parent=FBgn0039560.1.mrna1;Target=FBgn0039560.1 1 275 +
Chr2	stalkie_big_nohaplotig	CDS	152520122	152520918	100	-	2	ID=FBgn0039560.1.mrna1.cds2;Name=FBgn0039560.1;Parent=FBgn0039560.1.mrna1;Target=FBgn0039560.1 276 1072 +
Chr2	stalkie_big_nohaplotig	CDS	152518842	152520059	99	-	1	ID=FBgn0039560.1.mrna1.cds3;Name=FBgn0039560.1;Parent=FBgn0039560.1.mrna1;Target=FBgn0039560.1 1073 2290 +
Chr2	stalkie_big_nohaplotig	CDS	152518257	152518781	98	-	1	ID=FBgn0039560.1.mrna1.cds4;Name=FBgn0039560.1;Parent=FBgn0039560.1.mrna1;Target=FBgn0039560.1 2291 2815 +
Chr2	stalkie_big_nohaplotig	CDS	152518044	152518078	100	-	1	ID=FBgn0039560.1.mrna1.cds5;Name=FBgn0039560.1;Parent=FBgn0039560.1.mrna1;Target=FBgn0039560.1 2816 2850 +
Chr2	stalkie_big_nohaplotig	mRNA	152632891	152634066	.	-	.	ID=FBgn0028688.1.mrna1;Name=FBgn0028688.1;Parent=FBgn0028688.1.path1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1170;mismatches=6;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	152632891	152634066	99	-	.	ID=FBgn0028688.1.mrna1.exon1;Name=FBgn0028688.1;Parent=FBgn0028688.1.mrna1;Target=FBgn0028688.1 1176 1 .
Chr2	stalkie_big_nohaplotig	CDS	152632891	152634066	99	-	0	ID=FBgn0028688.1.mrna1.cds1;Name=FBgn0028688.1;Parent=FBgn0028688.1.mrna1;Target=FBgn0028688.1 1176 1 .
Chr2	stalkie_big_nohaplotig	mRNA	152611754	152632030	.	+	.	ID=FBgn0085405.1.mrna1;Name=FBgn0085405.1;Parent=FBgn0085405.1.path1;Dir=sensecoverage=100.0;identity=99.1;matches=1737;mismatches=15;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	152611754	152611991	99	+	.	ID=FBgn0085405.1.mrna1.exon1;Name=FBgn0085405.1;Parent=FBgn0085405.1.mrna1;Target=FBgn0085405.1 1 238 +
Chr2	stalkie_big_nohaplotig	exon	152625979	152626845	99	+	.	ID=FBgn0085405.1.mrna1.exon2;Name=FBgn0085405.1;Parent=FBgn0085405.1.mrna1;Target=FBgn0085405.1 239 1105 +
Chr2	stalkie_big_nohaplotig	exon	152631384	152632030	99	+	.	ID=FBgn0085405.1.mrna1.exon3;Name=FBgn0085405.1;Parent=FBgn0085405.1.mrna1;Target=FBgn0085405.1 1106 1752 +
Chr2	stalkie_big_nohaplotig	CDS	152611754	152611991	99	+	0	ID=FBgn0085405.1.mrna1.cds1;Name=FBgn0085405.1;Parent=FBgn0085405.1.mrna1;Target=FBgn0085405.1 1 238 +
Chr2	stalkie_big_nohaplotig	CDS	152625979	152626845	99	+	1	ID=FBgn0085405.1.mrna1.cds2;Name=FBgn0085405.1;Parent=FBgn0085405.1.mrna1;Target=FBgn0085405.1 239 1105 +
Chr2	stalkie_big_nohaplotig	CDS	152631384	152632030	99	+	1	ID=FBgn0085405.1.mrna1.cds3;Name=FBgn0085405.1;Parent=FBgn0085405.1.mrna1;Target=FBgn0085405.1 1106 1752 +
ChrX	stalkie_big_nohaplotig	mRNA	35941190	35942157	.	+	.	ID=ORF2945.mrna1;Name=ORF2945;Parent=ORF2945.path1;Dir=sensecoverage=99.1;identity=99.9;matches=778;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	35941190	35941424	100	+	.	ID=ORF2945.mrna1.exon1;Name=ORF2945;Parent=ORF2945.mrna1;Target=ORF2945 1 235 +
ChrX	stalkie_big_nohaplotig	exon	35941479	35941747	100	+	.	ID=ORF2945.mrna1.exon2;Name=ORF2945;Parent=ORF2945.mrna1;Target=ORF2945 236 504 +
ChrX	stalkie_big_nohaplotig	exon	35941825	35941984	100	+	.	ID=ORF2945.mrna1.exon3;Name=ORF2945;Parent=ORF2945.mrna1;Target=ORF2945 505 664 +
ChrX	stalkie_big_nohaplotig	exon	35942043	35942157	99	+	.	ID=ORF2945.mrna1.exon4;Name=ORF2945;Parent=ORF2945.mrna1;Target=ORF2945 665 779 +
ChrX	stalkie_big_nohaplotig	CDS	35941190	35941424	100	+	0	ID=ORF2945.mrna1.cds1;Name=ORF2945;Parent=ORF2945.mrna1;Target=ORF2945 1 235 +
ChrX	stalkie_big_nohaplotig	CDS	35941479	35941747	100	+	1	ID=ORF2945.mrna1.cds2;Name=ORF2945;Parent=ORF2945.mrna1;Target=ORF2945 236 504 +
ChrX	stalkie_big_nohaplotig	CDS	35941825	35941984	100	+	0	ID=ORF2945.mrna1.cds3;Name=ORF2945;Parent=ORF2945.mrna1;Target=ORF2945 505 664 +
ChrX	stalkie_big_nohaplotig	CDS	35942043	35942155	99	+	1	ID=ORF2945.mrna1.cds4;Name=ORF2945;Parent=ORF2945.mrna1;Target=ORF2945 665 777 +
ChrX	stalkie_big_nohaplotig	mRNA	36096729	36098462	.	+	.	ID=FBgn0260632.mrna1;Name=FBgn0260632;Parent=FBgn0260632.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1732;mismatches=1;indels=0;unknowns=1
ChrX	stalkie_big_nohaplotig	exon	36096729	36098462	99	+	.	ID=FBgn0260632.mrna1.exon1;Name=FBgn0260632;Parent=FBgn0260632.mrna1;Target=FBgn0260632 1734 1 .
ChrX	stalkie_big_nohaplotig	CDS	36096729	36098462	99	+	0	ID=FBgn0260632.mrna1.cds1;Name=FBgn0260632;Parent=FBgn0260632.mrna1;Target=FBgn0260632 1734 1 .
ChrX	stalkie_big_nohaplotig	mRNA	35938333	35940215	.	-	.	ID=FBgn0031457.1.mrna1;Name=FBgn0031457.1;Parent=FBgn0031457.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=999;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	35940194	35940215	100	-	.	ID=FBgn0031457.1.mrna1.exon1;Name=FBgn0031457.1;Parent=FBgn0031457.1.mrna1;Target=FBgn0031457.1 1 22 +
ChrX	stalkie_big_nohaplotig	exon	35939983	35940129	100	-	.	ID=FBgn0031457.1.mrna1.exon2;Name=FBgn0031457.1;Parent=FBgn0031457.1.mrna1;Target=FBgn0031457.1 23 169 +
ChrX	stalkie_big_nohaplotig	exon	35939210	35939906	100	-	.	ID=FBgn0031457.1.mrna1.exon3;Name=FBgn0031457.1;Parent=FBgn0031457.1.mrna1;Target=FBgn0031457.1 170 866 +
ChrX	stalkie_big_nohaplotig	exon	35938333	35938465	100	-	.	ID=FBgn0031457.1.mrna1.exon4;Name=FBgn0031457.1;Parent=FBgn0031457.1.mrna1;Target=FBgn0031457.1 867 999 +
ChrX	stalkie_big_nohaplotig	CDS	35940194	35940215	100	-	0	ID=FBgn0031457.1.mrna1.cds1;Name=FBgn0031457.1;Parent=FBgn0031457.1.mrna1;Target=FBgn0031457.1 1 22 +
ChrX	stalkie_big_nohaplotig	CDS	35939983	35940129	100	-	1	ID=FBgn0031457.1.mrna1.cds2;Name=FBgn0031457.1;Parent=FBgn0031457.1.mrna1;Target=FBgn0031457.1 23 169 +
ChrX	stalkie_big_nohaplotig	CDS	35939210	35939906	100	-	1	ID=FBgn0031457.1.mrna1.cds3;Name=FBgn0031457.1;Parent=FBgn0031457.1.mrna1;Target=FBgn0031457.1 170 866 +
ChrX	stalkie_big_nohaplotig	CDS	35938333	35938465	100	-	2	ID=FBgn0031457.1.mrna1.cds4;Name=FBgn0031457.1;Parent=FBgn0031457.1.mrna1;Target=FBgn0031457.1 867 999 +
ChrX	stalkie_big_nohaplotig	mRNA	36129358	36135093	.	+	.	ID=FBgn0037101.1.mrna1;Name=FBgn0037101.1;Parent=FBgn0037101.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1847;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	36129358	36129619	100	+	.	ID=FBgn0037101.1.mrna1.exon1;Name=FBgn0037101.1;Parent=FBgn0037101.1.mrna1;Target=FBgn0037101.1 1 262 +
ChrX	stalkie_big_nohaplotig	exon	36129681	36129832	100	+	.	ID=FBgn0037101.1.mrna1.exon2;Name=FBgn0037101.1;Parent=FBgn0037101.1.mrna1;Target=FBgn0037101.1 263 414 +
ChrX	stalkie_big_nohaplotig	exon	36129929	36130111	100	+	.	ID=FBgn0037101.1.mrna1.exon3;Name=FBgn0037101.1;Parent=FBgn0037101.1.mrna1;Target=FBgn0037101.1 415 597 +
ChrX	stalkie_big_nohaplotig	exon	36130178	36130387	99	+	.	ID=FBgn0037101.1.mrna1.exon4;Name=FBgn0037101.1;Parent=FBgn0037101.1.mrna1;Target=FBgn0037101.1 598 807 +
ChrX	stalkie_big_nohaplotig	exon	36132058	36132234	100	+	.	ID=FBgn0037101.1.mrna1.exon5;Name=FBgn0037101.1;Parent=FBgn0037101.1.mrna1;Target=FBgn0037101.1 808 984 +
ChrX	stalkie_big_nohaplotig	exon	36134100	36134389	100	+	.	ID=FBgn0037101.1.mrna1.exon6;Name=FBgn0037101.1;Parent=FBgn0037101.1.mrna1;Target=FBgn0037101.1 985 1274 +
ChrX	stalkie_big_nohaplotig	exon	36134451	36134596	100	+	.	ID=FBgn0037101.1.mrna1.exon7;Name=FBgn0037101.1;Parent=FBgn0037101.1.mrna1;Target=FBgn0037101.1 1275 1420 +
ChrX	stalkie_big_nohaplotig	exon	36134666	36135093	100	+	.	ID=FBgn0037101.1.mrna1.exon8;Name=FBgn0037101.1;Parent=FBgn0037101.1.mrna1;Target=FBgn0037101.1 1421 1848 +
ChrX	stalkie_big_nohaplotig	CDS	36129358	36129619	100	+	0	ID=FBgn0037101.1.mrna1.cds1;Name=FBgn0037101.1;Parent=FBgn0037101.1.mrna1;Target=FBgn0037101.1 1 262 +
ChrX	stalkie_big_nohaplotig	CDS	36129681	36129832	100	+	1	ID=FBgn0037101.1.mrna1.cds2;Name=FBgn0037101.1;Parent=FBgn0037101.1.mrna1;Target=FBgn0037101.1 263 414 +
ChrX	stalkie_big_nohaplotig	CDS	36129929	36130111	100	+	0	ID=FBgn0037101.1.mrna1.cds3;Name=FBgn0037101.1;Parent=FBgn0037101.1.mrna1;Target=FBgn0037101.1 415 597 +
ChrX	stalkie_big_nohaplotig	CDS	36130178	36130387	99	+	0	ID=FBgn0037101.1.mrna1.cds4;Name=FBgn0037101.1;Parent=FBgn0037101.1.mrna1;Target=FBgn0037101.1 598 807 +
ChrX	stalkie_big_nohaplotig	CDS	36132058	36132234	100	+	0	ID=FBgn0037101.1.mrna1.cds5;Name=FBgn0037101.1;Parent=FBgn0037101.1.mrna1;Target=FBgn0037101.1 808 984 +
ChrX	stalkie_big_nohaplotig	CDS	36134100	36134389	100	+	0	ID=FBgn0037101.1.mrna1.cds6;Name=FBgn0037101.1;Parent=FBgn0037101.1.mrna1;Target=FBgn0037101.1 985 1274 +
ChrX	stalkie_big_nohaplotig	CDS	36134451	36134596	100	+	2	ID=FBgn0037101.1.mrna1.cds7;Name=FBgn0037101.1;Parent=FBgn0037101.1.mrna1;Target=FBgn0037101.1 1275 1420 +
ChrX	stalkie_big_nohaplotig	CDS	36134666	36135093	100	+	1	ID=FBgn0037101.1.mrna1.cds8;Name=FBgn0037101.1;Parent=FBgn0037101.1.mrna1;Target=FBgn0037101.1 1421 1848 +
Chr1	stalkie_big_nohaplotig	mRNA	54510168	54512883	.	-	.	ID=FBgn0064119.3.mrna1;Name=FBgn0064119.3;Parent=FBgn0064119.3.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1662;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	54512867	54512883	100	-	.	ID=FBgn0064119.3.mrna1.exon1;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 1 17 +
Chr1	stalkie_big_nohaplotig	exon	54512633	54512756	100	-	.	ID=FBgn0064119.3.mrna1.exon2;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 18 141 +
Chr1	stalkie_big_nohaplotig	exon	54512459	54512575	100	-	.	ID=FBgn0064119.3.mrna1.exon3;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 142 258 +
Chr1	stalkie_big_nohaplotig	exon	54512239	54512387	100	-	.	ID=FBgn0064119.3.mrna1.exon4;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 259 407 +
Chr1	stalkie_big_nohaplotig	exon	54512039	54512153	100	-	.	ID=FBgn0064119.3.mrna1.exon5;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 408 522 +
Chr1	stalkie_big_nohaplotig	exon	54511923	54511978	100	-	.	ID=FBgn0064119.3.mrna1.exon6;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 523 578 +
Chr1	stalkie_big_nohaplotig	exon	54511519	54511641	100	-	.	ID=FBgn0064119.3.mrna1.exon7;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 579 701 +
Chr1	stalkie_big_nohaplotig	exon	54511104	54511436	100	-	.	ID=FBgn0064119.3.mrna1.exon8;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 702 1034 +
Chr1	stalkie_big_nohaplotig	exon	54510937	54511031	100	-	.	ID=FBgn0064119.3.mrna1.exon9;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 1035 1129 +
Chr1	stalkie_big_nohaplotig	exon	54510791	54510877	100	-	.	ID=FBgn0064119.3.mrna1.exon10;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 1130 1216 +
Chr1	stalkie_big_nohaplotig	exon	54510528	54510721	100	-	.	ID=FBgn0064119.3.mrna1.exon11;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 1217 1410 +
Chr1	stalkie_big_nohaplotig	exon	54510330	54510467	100	-	.	ID=FBgn0064119.3.mrna1.exon12;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 1411 1548 +
Chr1	stalkie_big_nohaplotig	exon	54510168	54510281	100	-	.	ID=FBgn0064119.3.mrna1.exon13;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 1549 1662 +
Chr1	stalkie_big_nohaplotig	CDS	54512867	54512883	100	-	0	ID=FBgn0064119.3.mrna1.cds1;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 1 17 +
Chr1	stalkie_big_nohaplotig	CDS	54512633	54512756	100	-	2	ID=FBgn0064119.3.mrna1.cds2;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 18 141 +
Chr1	stalkie_big_nohaplotig	CDS	54512459	54512575	100	-	0	ID=FBgn0064119.3.mrna1.cds3;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 142 258 +
Chr1	stalkie_big_nohaplotig	CDS	54512239	54512387	100	-	0	ID=FBgn0064119.3.mrna1.cds4;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 259 407 +
Chr1	stalkie_big_nohaplotig	CDS	54512039	54512153	100	-	2	ID=FBgn0064119.3.mrna1.cds5;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 408 522 +
Chr1	stalkie_big_nohaplotig	CDS	54511923	54511978	100	-	0	ID=FBgn0064119.3.mrna1.cds6;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 523 578 +
Chr1	stalkie_big_nohaplotig	CDS	54511519	54511641	100	-	2	ID=FBgn0064119.3.mrna1.cds7;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 579 701 +
Chr1	stalkie_big_nohaplotig	CDS	54511104	54511436	100	-	2	ID=FBgn0064119.3.mrna1.cds8;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 702 1034 +
Chr1	stalkie_big_nohaplotig	CDS	54510937	54511031	100	-	2	ID=FBgn0064119.3.mrna1.cds9;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 1035 1129 +
Chr1	stalkie_big_nohaplotig	CDS	54510791	54510877	100	-	1	ID=FBgn0064119.3.mrna1.cds10;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 1130 1216 +
Chr1	stalkie_big_nohaplotig	CDS	54510528	54510721	100	-	1	ID=FBgn0064119.3.mrna1.cds11;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 1217 1410 +
Chr1	stalkie_big_nohaplotig	CDS	54510330	54510467	100	-	0	ID=FBgn0064119.3.mrna1.cds12;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 1411 1548 +
Chr1	stalkie_big_nohaplotig	CDS	54510168	54510281	100	-	0	ID=FBgn0064119.3.mrna1.cds13;Name=FBgn0064119.3;Parent=FBgn0064119.3.mrna1;Target=FBgn0064119.3 1549 1662 +
Chr2	stalkie_big_nohaplotig	mRNA	70805882	70915825	.	-	.	ID=FBgn0039938.1.mrna1;Name=FBgn0039938.1;Parent=FBgn0039938.1.path1;Dir=sensecoverage=99.9;identity=99.7;matches=2957;mismatches=7;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	70915351	70915825	99	-	.	ID=FBgn0039938.1.mrna1.exon1;Name=FBgn0039938.1;Parent=FBgn0039938.1.mrna1;Target=FBgn0039938.1 3 477 +
Chr2	stalkie_big_nohaplotig	exon	70886138	70886676	100	-	.	ID=FBgn0039938.1.mrna1.exon2;Name=FBgn0039938.1;Parent=FBgn0039938.1.mrna1;Target=FBgn0039938.1 478 1016 +
Chr2	stalkie_big_nohaplotig	exon	70884082	70884220	100	-	.	ID=FBgn0039938.1.mrna1.exon3;Name=FBgn0039938.1;Parent=FBgn0039938.1.mrna1;Target=FBgn0039938.1 1017 1155 +
Chr2	stalkie_big_nohaplotig	exon	70805882	70807692	99	-	.	ID=FBgn0039938.1.mrna1.exon4;Name=FBgn0039938.1;Parent=FBgn0039938.1.mrna1;Target=FBgn0039938.1 1156 2967 +
Chr2	stalkie_big_nohaplotig	CDS	70915351	70915824	99	-	0	ID=FBgn0039938.1.mrna1.cds1;Name=FBgn0039938.1;Parent=FBgn0039938.1.mrna1;Target=FBgn0039938.1 4 477 +
Chr2	stalkie_big_nohaplotig	CDS	70886138	70886676	100	-	0	ID=FBgn0039938.1.mrna1.cds2;Name=FBgn0039938.1;Parent=FBgn0039938.1.mrna1;Target=FBgn0039938.1 478 1016 +
Chr2	stalkie_big_nohaplotig	CDS	70884082	70884220	100	-	2	ID=FBgn0039938.1.mrna1.cds3;Name=FBgn0039938.1;Parent=FBgn0039938.1.mrna1;Target=FBgn0039938.1 1017 1155 +
Chr2	stalkie_big_nohaplotig	CDS	70805882	70807692	99	-	0	ID=FBgn0039938.1.mrna1.cds4;Name=FBgn0039938.1;Parent=FBgn0039938.1.mrna1;Target=FBgn0039938.1 1156 2967 +
ChrX	stalkie_big_nohaplotig	mRNA	17573238	17590161	.	-	.	ID=FBgn0005278.2.mrna1;Name=FBgn0005278.2;Parent=FBgn0005278.2.path1;Dir=sensecoverage=99.8;identity=99.9;matches=1268;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	17589990	17590161	100	-	.	ID=FBgn0005278.2.mrna1.exon1;Name=FBgn0005278.2;Parent=FBgn0005278.2.mrna1;Target=FBgn0005278.2 4 175 +
ChrX	stalkie_big_nohaplotig	exon	17580693	17580770	100	-	.	ID=FBgn0005278.2.mrna1.exon2;Name=FBgn0005278.2;Parent=FBgn0005278.2.mrna1;Target=FBgn0005278.2 176 253 +
ChrX	stalkie_big_nohaplotig	exon	17578932	17579054	100	-	.	ID=FBgn0005278.2.mrna1.exon3;Name=FBgn0005278.2;Parent=FBgn0005278.2.mrna1;Target=FBgn0005278.2 254 376 +
ChrX	stalkie_big_nohaplotig	exon	17576431	17576543	100	-	.	ID=FBgn0005278.2.mrna1.exon4;Name=FBgn0005278.2;Parent=FBgn0005278.2.mrna1;Target=FBgn0005278.2 377 489 +
ChrX	stalkie_big_nohaplotig	exon	17575097	17575240	99	-	.	ID=FBgn0005278.2.mrna1.exon5;Name=FBgn0005278.2;Parent=FBgn0005278.2.mrna1;Target=FBgn0005278.2 490 633 +
ChrX	stalkie_big_nohaplotig	exon	17573433	17573968	100	-	.	ID=FBgn0005278.2.mrna1.exon6;Name=FBgn0005278.2;Parent=FBgn0005278.2.mrna1;Target=FBgn0005278.2 634 1169 +
ChrX	stalkie_big_nohaplotig	exon	17573238	17573340	100	-	.	ID=FBgn0005278.2.mrna1.exon7;Name=FBgn0005278.2;Parent=FBgn0005278.2.mrna1;Target=FBgn0005278.2 1170 1272 +
ChrX	stalkie_big_nohaplotig	CDS	17589990	17590161	100	-	0	ID=FBgn0005278.2.mrna1.cds1;Name=FBgn0005278.2;Parent=FBgn0005278.2.mrna1;Target=FBgn0005278.2 4 175 +
ChrX	stalkie_big_nohaplotig	CDS	17580693	17580770	100	-	1	ID=FBgn0005278.2.mrna1.cds2;Name=FBgn0005278.2;Parent=FBgn0005278.2.mrna1;Target=FBgn0005278.2 176 253 +
ChrX	stalkie_big_nohaplotig	CDS	17578932	17579054	100	-	1	ID=FBgn0005278.2.mrna1.cds3;Name=FBgn0005278.2;Parent=FBgn0005278.2.mrna1;Target=FBgn0005278.2 254 376 +
ChrX	stalkie_big_nohaplotig	CDS	17576431	17576543	100	-	1	ID=FBgn0005278.2.mrna1.cds4;Name=FBgn0005278.2;Parent=FBgn0005278.2.mrna1;Target=FBgn0005278.2 377 489 +
ChrX	stalkie_big_nohaplotig	CDS	17575097	17575240	99	-	0	ID=FBgn0005278.2.mrna1.cds5;Name=FBgn0005278.2;Parent=FBgn0005278.2.mrna1;Target=FBgn0005278.2 490 633 +
ChrX	stalkie_big_nohaplotig	CDS	17573433	17573968	100	-	0	ID=FBgn0005278.2.mrna1.cds6;Name=FBgn0005278.2;Parent=FBgn0005278.2.mrna1;Target=FBgn0005278.2 634 1169 +
ChrX	stalkie_big_nohaplotig	CDS	17573238	17573340	100	-	2	ID=FBgn0005278.2.mrna1.cds7;Name=FBgn0005278.2;Parent=FBgn0005278.2.mrna1;Target=FBgn0005278.2 1170 1272 +
Chr1	stalkie_big_nohaplotig	mRNA	86946394	86947214	.	-	.	ID=FBgn0036099.1.mrna1;Name=FBgn0036099.1;Parent=FBgn0036099.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=753;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	86947118	86947214	100	-	.	ID=FBgn0036099.1.mrna1.exon1;Name=FBgn0036099.1;Parent=FBgn0036099.1.mrna1;Target=FBgn0036099.1 1 97 +
Chr1	stalkie_big_nohaplotig	exon	86946394	86947049	100	-	.	ID=FBgn0036099.1.mrna1.exon2;Name=FBgn0036099.1;Parent=FBgn0036099.1.mrna1;Target=FBgn0036099.1 98 753 +
Chr1	stalkie_big_nohaplotig	CDS	86947118	86947214	100	-	0	ID=FBgn0036099.1.mrna1.cds1;Name=FBgn0036099.1;Parent=FBgn0036099.1.mrna1;Target=FBgn0036099.1 1 97 +
Chr1	stalkie_big_nohaplotig	CDS	86946394	86947049	100	-	1	ID=FBgn0036099.1.mrna1.cds2;Name=FBgn0036099.1;Parent=FBgn0036099.1.mrna1;Target=FBgn0036099.1 98 753 +
Chr2	stalkie_big_nohaplotig	mRNA	7273022	7280492	.	+	.	ID=ORF1275.mrna1;Name=ORF1275;Parent=ORF1275.path1;Dir=sensecoverage=100.0;identity=99.4;matches=1151;mismatches=7;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	7273022	7273058	97	+	.	ID=ORF1275.mrna1.exon1;Name=ORF1275;Parent=ORF1275.mrna1;Target=ORF1275 1 37 +
Chr2	stalkie_big_nohaplotig	exon	7279372	7280492	99	+	.	ID=ORF1275.mrna1.exon2;Name=ORF1275;Parent=ORF1275.mrna1;Target=ORF1275 38 1158 +
Chr2	stalkie_big_nohaplotig	CDS	7273022	7273058	97	+	0	ID=ORF1275.mrna1.cds1;Name=ORF1275;Parent=ORF1275.mrna1;Target=ORF1275 1 37 +
Chr2	stalkie_big_nohaplotig	CDS	7279372	7280492	99	+	1	ID=ORF1275.mrna1.cds2;Name=ORF1275;Parent=ORF1275.mrna1;Target=ORF1275 38 1158 +
ChrX	stalkie_big_nohaplotig	mRNA	1438047	1439468	.	+	.	ID=ORF1170.mrna1;Name=ORF1170;Parent=ORF1170.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1199;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	1438047	1438977	99	+	.	ID=ORF1170.mrna1.exon1;Name=ORF1170;Parent=ORF1170.mrna1;Target=ORF1170 931 1 .
ChrX	stalkie_big_nohaplotig	exon	1439200	1439468	100	+	.	ID=ORF1170.mrna1.exon2;Name=ORF1170;Parent=ORF1170.mrna1;Target=ORF1170 1200 932 .
ChrX	stalkie_big_nohaplotig	CDS	1438047	1438977	99	+	0	ID=ORF1170.mrna1.cds1;Name=ORF1170;Parent=ORF1170.mrna1;Target=ORF1170 931 1 .
ChrX	stalkie_big_nohaplotig	CDS	1439200	1439468	100	+	1	ID=ORF1170.mrna1.cds2;Name=ORF1170;Parent=ORF1170.mrna1;Target=ORF1170 1200 932 .
ChrX	stalkie_big_nohaplotig	mRNA	10563201	10564512	.	-	.	ID=FBgn0032376.2.mrna1;Name=FBgn0032376.2;Parent=FBgn0032376.2.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1047;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	10563956	10564512	100	-	.	ID=FBgn0032376.2.mrna1.exon1;Name=FBgn0032376.2;Parent=FBgn0032376.2.mrna1;Target=FBgn0032376.2 1 557 +
ChrX	stalkie_big_nohaplotig	exon	10563664	10563874	100	-	.	ID=FBgn0032376.2.mrna1.exon2;Name=FBgn0032376.2;Parent=FBgn0032376.2.mrna1;Target=FBgn0032376.2 558 768 +
ChrX	stalkie_big_nohaplotig	exon	10563484	10563594	100	-	.	ID=FBgn0032376.2.mrna1.exon3;Name=FBgn0032376.2;Parent=FBgn0032376.2.mrna1;Target=FBgn0032376.2 769 879 +
ChrX	stalkie_big_nohaplotig	exon	10563201	10563368	100	-	.	ID=FBgn0032376.2.mrna1.exon4;Name=FBgn0032376.2;Parent=FBgn0032376.2.mrna1;Target=FBgn0032376.2 880 1047 +
ChrX	stalkie_big_nohaplotig	CDS	10563956	10564512	100	-	0	ID=FBgn0032376.2.mrna1.cds1;Name=FBgn0032376.2;Parent=FBgn0032376.2.mrna1;Target=FBgn0032376.2 1 557 +
ChrX	stalkie_big_nohaplotig	CDS	10563664	10563874	100	-	2	ID=FBgn0032376.2.mrna1.cds2;Name=FBgn0032376.2;Parent=FBgn0032376.2.mrna1;Target=FBgn0032376.2 558 768 +
ChrX	stalkie_big_nohaplotig	CDS	10563484	10563594	100	-	0	ID=FBgn0032376.2.mrna1.cds3;Name=FBgn0032376.2;Parent=FBgn0032376.2.mrna1;Target=FBgn0032376.2 769 879 +
ChrX	stalkie_big_nohaplotig	CDS	10563201	10563368	100	-	0	ID=FBgn0032376.2.mrna1.cds4;Name=FBgn0032376.2;Parent=FBgn0032376.2.mrna1;Target=FBgn0032376.2 880 1047 +
ChrX	stalkie_big_nohaplotig	mRNA	10568623	10580671	.	-	.	ID=FBgn0261836.mrna1;Name=FBgn0261836;Parent=FBgn0261836.path1;Dir=sensecoverage=100.0;identity=99.9;matches=6513;mismatches=5;indels=1;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	10578828	10580671	99	-	.	ID=FBgn0261836.mrna1.exon1;Name=FBgn0261836;Parent=FBgn0261836.mrna1;Target=FBgn0261836 1 1845 +
ChrX	stalkie_big_nohaplotig	exon	10577476	10577781	100	-	.	ID=FBgn0261836.mrna1.exon2;Name=FBgn0261836;Parent=FBgn0261836.mrna1;Target=FBgn0261836 1846 2151 +
ChrX	stalkie_big_nohaplotig	exon	10576591	10576848	100	-	.	ID=FBgn0261836.mrna1.exon3;Name=FBgn0261836;Parent=FBgn0261836.mrna1;Target=FBgn0261836 2152 2409 +
ChrX	stalkie_big_nohaplotig	exon	10572504	10575523	99	-	.	ID=FBgn0261836.mrna1.exon4;Name=FBgn0261836;Parent=FBgn0261836.mrna1;Target=FBgn0261836 2410 5429 +
ChrX	stalkie_big_nohaplotig	exon	10571794	10572423	99	-	.	ID=FBgn0261836.mrna1.exon5;Name=FBgn0261836;Parent=FBgn0261836.mrna1;Target=FBgn0261836 5430 6059 +
ChrX	stalkie_big_nohaplotig	exon	10570665	10570806	99	-	.	ID=FBgn0261836.mrna1.exon6;Name=FBgn0261836;Parent=FBgn0261836.mrna1;Target=FBgn0261836 6060 6201 +
ChrX	stalkie_big_nohaplotig	exon	10570266	10570345	100	-	.	ID=FBgn0261836.mrna1.exon7;Name=FBgn0261836;Parent=FBgn0261836.mrna1;Target=FBgn0261836 6202 6281 +
ChrX	stalkie_big_nohaplotig	exon	10568623	10568860	100	-	.	ID=FBgn0261836.mrna1.exon8;Name=FBgn0261836;Parent=FBgn0261836.mrna1;Target=FBgn0261836 6282 6519 +
ChrX	stalkie_big_nohaplotig	CDS	10580581	10580669	97	-	0	ID=FBgn0261836.mrna1.cds1;Name=FBgn0261836;Parent=FBgn0261836.mrna1;Target=FBgn0261836 3 92 +
ChrX	stalkie_big_nohaplotig	mRNA	10809420	10810518	.	-	.	ID=FBgn0031491.3.mrna1;Name=FBgn0031491.3;Parent=FBgn0031491.3.path1;Dir=sensecoverage=100.0;identity=99.5;matches=1024;mismatches=5;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	10809899	10810518	99	-	.	ID=FBgn0031491.3.mrna1.exon1;Name=FBgn0031491.3;Parent=FBgn0031491.3.mrna1;Target=FBgn0031491.3 1 620 +
ChrX	stalkie_big_nohaplotig	exon	10809420	10809828	100	-	.	ID=FBgn0031491.3.mrna1.exon2;Name=FBgn0031491.3;Parent=FBgn0031491.3.mrna1;Target=FBgn0031491.3 621 1029 +
ChrX	stalkie_big_nohaplotig	CDS	10809899	10810518	99	-	0	ID=FBgn0031491.3.mrna1.cds1;Name=FBgn0031491.3;Parent=FBgn0031491.3.mrna1;Target=FBgn0031491.3 1 620 +
ChrX	stalkie_big_nohaplotig	CDS	10809420	10809828	100	-	2	ID=FBgn0031491.3.mrna1.cds2;Name=FBgn0031491.3;Parent=FBgn0031491.3.mrna1;Target=FBgn0031491.3 621 1029 +
ChrX	stalkie_big_nohaplotig	mRNA	10826144	10827504	.	+	.	ID=FBgn0031495.1.mrna1;Name=FBgn0031495.1;Parent=FBgn0031495.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1226;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	10826144	10826349	100	+	.	ID=FBgn0031495.1.mrna1.exon1;Name=FBgn0031495.1;Parent=FBgn0031495.1.mrna1;Target=FBgn0031495.1 1 206 +
ChrX	stalkie_big_nohaplotig	exon	10826416	10827288	99	+	.	ID=FBgn0031495.1.mrna1.exon2;Name=FBgn0031495.1;Parent=FBgn0031495.1.mrna1;Target=FBgn0031495.1 207 1079 +
ChrX	stalkie_big_nohaplotig	exon	10827357	10827504	100	+	.	ID=FBgn0031495.1.mrna1.exon3;Name=FBgn0031495.1;Parent=FBgn0031495.1.mrna1;Target=FBgn0031495.1 1080 1227 +
ChrX	stalkie_big_nohaplotig	CDS	10826144	10826349	100	+	0	ID=FBgn0031495.1.mrna1.cds1;Name=FBgn0031495.1;Parent=FBgn0031495.1.mrna1;Target=FBgn0031495.1 1 206 +
ChrX	stalkie_big_nohaplotig	CDS	10826416	10827288	99	+	2	ID=FBgn0031495.1.mrna1.cds2;Name=FBgn0031495.1;Parent=FBgn0031495.1.mrna1;Target=FBgn0031495.1 207 1079 +
ChrX	stalkie_big_nohaplotig	CDS	10827357	10827504	100	+	2	ID=FBgn0031495.1.mrna1.cds3;Name=FBgn0031495.1;Parent=FBgn0031495.1.mrna1;Target=FBgn0031495.1 1080 1227 +
Chr2	stalkie_big_nohaplotig	mRNA	53318222	53318750	.	-	.	ID=FBgn0034794.mrna1;Name=FBgn0034794;Parent=FBgn0034794.path1;Dir=sensecoverage=99.8;identity=99.1;matches=466;mismatches=4;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	53318649	53318750	99	-	.	ID=FBgn0034794.mrna1.exon1;Name=FBgn0034794;Parent=FBgn0034794.mrna1;Target=FBgn0034794 1 102 +
Chr2	stalkie_big_nohaplotig	exon	53318222	53318589	99	-	.	ID=FBgn0034794.mrna1.exon2;Name=FBgn0034794;Parent=FBgn0034794.mrna1;Target=FBgn0034794 103 470 +
Chr2	stalkie_big_nohaplotig	CDS	53318649	53318750	99	-	0	ID=FBgn0034794.mrna1.cds1;Name=FBgn0034794;Parent=FBgn0034794.mrna1;Target=FBgn0034794 1 102 +
Chr2	stalkie_big_nohaplotig	CDS	53318224	53318589	99	-	0	ID=FBgn0034794.mrna1.cds2;Name=FBgn0034794;Parent=FBgn0034794.mrna1;Target=FBgn0034794 103 468 +
ChrX	stalkie_big_nohaplotig	mRNA	10540619	10541725	.	+	.	ID=ORF1447.mrna1;Name=ORF1447;Parent=ORF1447.path1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1093;mismatches=8;indels=6;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	10540619	10541725	98	+	.	ID=ORF1447.mrna1.exon1;Name=ORF1447;Parent=ORF1447.mrna1;Target=ORF1447 1101 1 .
ChrX	stalkie_big_nohaplotig	CDS	10540619	10541725	98	+	0	ID=ORF1447.mrna1.cds1;Name=ORF1447;Parent=ORF1447.mrna1;Target=ORF1447 1101 1 .
ChrX	stalkie_big_nohaplotig	mRNA	10465451	10508137	.	+	.	ID=FBgn0085407.2.mrna1;Name=FBgn0085407.2;Parent=FBgn0085407.2.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1595;mismatches=4;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	10465451	10466242	99	+	.	ID=FBgn0085407.2.mrna1.exon1;Name=FBgn0085407.2;Parent=FBgn0085407.2.mrna1;Target=FBgn0085407.2 1 792 +
ChrX	stalkie_big_nohaplotig	exon	10505609	10505744	100	+	.	ID=FBgn0085407.2.mrna1.exon2;Name=FBgn0085407.2;Parent=FBgn0085407.2.mrna1;Target=FBgn0085407.2 793 928 +
ChrX	stalkie_big_nohaplotig	exon	10505859	10506070	100	+	.	ID=FBgn0085407.2.mrna1.exon3;Name=FBgn0085407.2;Parent=FBgn0085407.2.mrna1;Target=FBgn0085407.2 929 1140 +
ChrX	stalkie_big_nohaplotig	exon	10507524	10507825	100	+	.	ID=FBgn0085407.2.mrna1.exon4;Name=FBgn0085407.2;Parent=FBgn0085407.2.mrna1;Target=FBgn0085407.2 1141 1442 +
ChrX	stalkie_big_nohaplotig	exon	10507981	10508137	100	+	.	ID=FBgn0085407.2.mrna1.exon5;Name=FBgn0085407.2;Parent=FBgn0085407.2.mrna1;Target=FBgn0085407.2 1443 1599 +
ChrX	stalkie_big_nohaplotig	CDS	10465451	10466242	99	+	0	ID=FBgn0085407.2.mrna1.cds1;Name=FBgn0085407.2;Parent=FBgn0085407.2.mrna1;Target=FBgn0085407.2 1 792 +
ChrX	stalkie_big_nohaplotig	CDS	10505609	10505744	100	+	0	ID=FBgn0085407.2.mrna1.cds2;Name=FBgn0085407.2;Parent=FBgn0085407.2.mrna1;Target=FBgn0085407.2 793 928 +
ChrX	stalkie_big_nohaplotig	CDS	10505859	10506070	100	+	1	ID=FBgn0085407.2.mrna1.cds3;Name=FBgn0085407.2;Parent=FBgn0085407.2.mrna1;Target=FBgn0085407.2 929 1140 +
ChrX	stalkie_big_nohaplotig	CDS	10507524	10507825	100	+	0	ID=FBgn0085407.2.mrna1.cds4;Name=FBgn0085407.2;Parent=FBgn0085407.2.mrna1;Target=FBgn0085407.2 1141 1442 +
ChrX	stalkie_big_nohaplotig	CDS	10507981	10508137	100	+	2	ID=FBgn0085407.2.mrna1.cds5;Name=FBgn0085407.2;Parent=FBgn0085407.2.mrna1;Target=FBgn0085407.2 1443 1599 +
Chr2	stalkie_big_nohaplotig	mRNA	143018851	143076972	.	-	.	ID=FBgn0038156.1.mrna2;Name=FBgn0038156.1;Parent=FBgn0038156.1.path2;Dir=sensecoverage=86.9;identity=99.8;matches=2778;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	143076840	143076972	99	-	.	ID=FBgn0038156.1.mrna2.exon1;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 422 554 +
Chr2	stalkie_big_nohaplotig	exon	143073892	143074100	100	-	.	ID=FBgn0038156.1.mrna2.exon2;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 555 763 +
Chr2	stalkie_big_nohaplotig	exon	143067728	143067838	100	-	.	ID=FBgn0038156.1.mrna2.exon3;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 764 874 +
Chr2	stalkie_big_nohaplotig	exon	143066381	143066584	100	-	.	ID=FBgn0038156.1.mrna2.exon4;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 875 1078 +
Chr2	stalkie_big_nohaplotig	exon	143065369	143065520	100	-	.	ID=FBgn0038156.1.mrna2.exon5;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 1079 1230 +
Chr2	stalkie_big_nohaplotig	exon	143063522	143063666	100	-	.	ID=FBgn0038156.1.mrna2.exon6;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 1231 1375 +
Chr2	stalkie_big_nohaplotig	exon	143061765	143061895	100	-	.	ID=FBgn0038156.1.mrna2.exon7;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 1376 1506 +
Chr2	stalkie_big_nohaplotig	exon	143059579	143059738	100	-	.	ID=FBgn0038156.1.mrna2.exon8;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 1507 1666 +
Chr2	stalkie_big_nohaplotig	exon	143051957	143052126	100	-	.	ID=FBgn0038156.1.mrna2.exon9;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 1667 1836 +
Chr2	stalkie_big_nohaplotig	exon	143043388	143043511	100	-	.	ID=FBgn0038156.1.mrna2.exon10;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 1837 1960 +
Chr2	stalkie_big_nohaplotig	exon	143042855	143043015	99	-	.	ID=FBgn0038156.1.mrna2.exon11;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 1961 2121 +
Chr2	stalkie_big_nohaplotig	exon	143039332	143039473	99	-	.	ID=FBgn0038156.1.mrna2.exon12;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 2122 2263 +
Chr2	stalkie_big_nohaplotig	exon	143024131	143024254	99	-	.	ID=FBgn0038156.1.mrna2.exon13;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 2264 2387 +
Chr2	stalkie_big_nohaplotig	exon	143022685	143022995	99	-	.	ID=FBgn0038156.1.mrna2.exon14;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 2388 2698 +
Chr2	stalkie_big_nohaplotig	exon	143019755	143020032	100	-	.	ID=FBgn0038156.1.mrna2.exon15;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 2699 2976 +
Chr2	stalkie_big_nohaplotig	exon	143018851	143019078	100	-	.	ID=FBgn0038156.1.mrna2.exon16;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 2977 3204 +
Chr2	stalkie_big_nohaplotig	CDS	143076840	143076972	99	-	1	ID=FBgn0038156.1.mrna2.cds1;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 422 554 +
Chr2	stalkie_big_nohaplotig	CDS	143073892	143074100	100	-	2	ID=FBgn0038156.1.mrna2.cds2;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 555 763 +
Chr2	stalkie_big_nohaplotig	CDS	143067728	143067838	100	-	1	ID=FBgn0038156.1.mrna2.cds3;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 764 874 +
Chr2	stalkie_big_nohaplotig	CDS	143066381	143066584	100	-	1	ID=FBgn0038156.1.mrna2.cds4;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 875 1078 +
Chr2	stalkie_big_nohaplotig	CDS	143065369	143065520	100	-	1	ID=FBgn0038156.1.mrna2.cds5;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 1079 1230 +
Chr2	stalkie_big_nohaplotig	CDS	143063522	143063666	100	-	0	ID=FBgn0038156.1.mrna2.cds6;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 1231 1375 +
Chr2	stalkie_big_nohaplotig	CDS	143061765	143061895	100	-	1	ID=FBgn0038156.1.mrna2.cds7;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 1376 1506 +
Chr2	stalkie_big_nohaplotig	CDS	143059579	143059738	100	-	0	ID=FBgn0038156.1.mrna2.cds8;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 1507 1666 +
Chr2	stalkie_big_nohaplotig	CDS	143051957	143052126	100	-	1	ID=FBgn0038156.1.mrna2.cds9;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 1667 1836 +
Chr2	stalkie_big_nohaplotig	CDS	143043388	143043511	100	-	0	ID=FBgn0038156.1.mrna2.cds10;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 1837 1960 +
Chr2	stalkie_big_nohaplotig	CDS	143042855	143043015	99	-	1	ID=FBgn0038156.1.mrna2.cds11;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 1961 2121 +
Chr2	stalkie_big_nohaplotig	CDS	143039332	143039473	99	-	0	ID=FBgn0038156.1.mrna2.cds12;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 2122 2263 +
Chr2	stalkie_big_nohaplotig	CDS	143024131	143024254	99	-	1	ID=FBgn0038156.1.mrna2.cds13;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 2264 2387 +
Chr2	stalkie_big_nohaplotig	CDS	143022685	143022995	99	-	2	ID=FBgn0038156.1.mrna2.cds14;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 2388 2698 +
Chr2	stalkie_big_nohaplotig	CDS	143019755	143020032	100	-	1	ID=FBgn0038156.1.mrna2.cds15;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 2699 2976 +
Chr2	stalkie_big_nohaplotig	CDS	143018851	143019078	100	-	0	ID=FBgn0038156.1.mrna2.cds16;Name=FBgn0038156.1;Parent=FBgn0038156.1.mrna2;Target=FBgn0038156.1 2977 3204 +
ChrX	stalkie_big_nohaplotig	mRNA	53296503	53328344	.	+	.	ID=FBgn0031850.1.mrna1;Name=FBgn0031850.1;Parent=FBgn0031850.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2319;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	53296503	53296596	100	+	.	ID=FBgn0031850.1.mrna1.exon1;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 1 94 +
ChrX	stalkie_big_nohaplotig	exon	53298850	53298916	100	+	.	ID=FBgn0031850.1.mrna1.exon2;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 95 161 +
ChrX	stalkie_big_nohaplotig	exon	53298980	53299298	100	+	.	ID=FBgn0031850.1.mrna1.exon3;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 162 480 +
ChrX	stalkie_big_nohaplotig	exon	53300602	53300734	100	+	.	ID=FBgn0031850.1.mrna1.exon4;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 481 613 +
ChrX	stalkie_big_nohaplotig	exon	53300826	53300972	100	+	.	ID=FBgn0031850.1.mrna1.exon5;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 614 760 +
ChrX	stalkie_big_nohaplotig	exon	53301450	53301635	100	+	.	ID=FBgn0031850.1.mrna1.exon6;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 761 946 +
ChrX	stalkie_big_nohaplotig	exon	53303310	53303427	100	+	.	ID=FBgn0031850.1.mrna1.exon7;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 947 1064 +
ChrX	stalkie_big_nohaplotig	exon	53316399	53316520	100	+	.	ID=FBgn0031850.1.mrna1.exon8;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 1065 1186 +
ChrX	stalkie_big_nohaplotig	exon	53324509	53324709	100	+	.	ID=FBgn0031850.1.mrna1.exon9;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 1187 1387 +
ChrX	stalkie_big_nohaplotig	exon	53327291	53327406	100	+	.	ID=FBgn0031850.1.mrna1.exon10;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 1388 1503 +
ChrX	stalkie_big_nohaplotig	exon	53327469	53328244	100	+	.	ID=FBgn0031850.1.mrna1.exon11;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 1504 2279 +
ChrX	stalkie_big_nohaplotig	exon	53328305	53328344	100	+	.	ID=FBgn0031850.1.mrna1.exon12;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 2280 2319 +
ChrX	stalkie_big_nohaplotig	CDS	53296503	53296596	100	+	0	ID=FBgn0031850.1.mrna1.cds1;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 1 94 +
ChrX	stalkie_big_nohaplotig	CDS	53298850	53298916	100	+	1	ID=FBgn0031850.1.mrna1.cds2;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 95 161 +
ChrX	stalkie_big_nohaplotig	CDS	53298980	53299298	100	+	2	ID=FBgn0031850.1.mrna1.cds3;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 162 480 +
ChrX	stalkie_big_nohaplotig	CDS	53300602	53300734	100	+	0	ID=FBgn0031850.1.mrna1.cds4;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 481 613 +
ChrX	stalkie_big_nohaplotig	CDS	53300826	53300972	100	+	1	ID=FBgn0031850.1.mrna1.cds5;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 614 760 +
ChrX	stalkie_big_nohaplotig	CDS	53301450	53301635	100	+	1	ID=FBgn0031850.1.mrna1.cds6;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 761 946 +
ChrX	stalkie_big_nohaplotig	CDS	53303310	53303427	100	+	1	ID=FBgn0031850.1.mrna1.cds7;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 947 1064 +
ChrX	stalkie_big_nohaplotig	CDS	53316399	53316520	100	+	2	ID=FBgn0031850.1.mrna1.cds8;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 1065 1186 +
ChrX	stalkie_big_nohaplotig	CDS	53324509	53324709	100	+	1	ID=FBgn0031850.1.mrna1.cds9;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 1187 1387 +
ChrX	stalkie_big_nohaplotig	CDS	53327291	53327406	100	+	1	ID=FBgn0031850.1.mrna1.cds10;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 1388 1503 +
ChrX	stalkie_big_nohaplotig	CDS	53327469	53328244	100	+	0	ID=FBgn0031850.1.mrna1.cds11;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 1504 2279 +
ChrX	stalkie_big_nohaplotig	CDS	53328305	53328344	100	+	2	ID=FBgn0031850.1.mrna1.cds12;Name=FBgn0031850.1;Parent=FBgn0031850.1.mrna1;Target=FBgn0031850.1 2280 2319 +
ChrX	stalkie_big_nohaplotig	mRNA	53129945	53143412	.	-	.	ID=FBgn0032957.1.mrna1;Name=FBgn0032957.1;Parent=FBgn0032957.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=3317;mismatches=7;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	53143171	53143412	100	-	.	ID=FBgn0032957.1.mrna1.exon1;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 1 242 +
ChrX	stalkie_big_nohaplotig	exon	53138588	53138755	99	-	.	ID=FBgn0032957.1.mrna1.exon2;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 243 410 +
ChrX	stalkie_big_nohaplotig	exon	53138294	53138459	100	-	.	ID=FBgn0032957.1.mrna1.exon3;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 411 576 +
ChrX	stalkie_big_nohaplotig	exon	53138049	53138226	100	-	.	ID=FBgn0032957.1.mrna1.exon4;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 577 754 +
ChrX	stalkie_big_nohaplotig	exon	53136042	53136484	99	-	.	ID=FBgn0032957.1.mrna1.exon5;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 755 1197 +
ChrX	stalkie_big_nohaplotig	exon	53135527	53135924	99	-	.	ID=FBgn0032957.1.mrna1.exon6;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 1198 1595 +
ChrX	stalkie_big_nohaplotig	exon	53135363	53135463	100	-	.	ID=FBgn0032957.1.mrna1.exon7;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 1596 1696 +
ChrX	stalkie_big_nohaplotig	exon	53135031	53135225	99	-	.	ID=FBgn0032957.1.mrna1.exon8;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 1697 1891 +
ChrX	stalkie_big_nohaplotig	exon	53134526	53134827	100	-	.	ID=FBgn0032957.1.mrna1.exon9;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 1892 2193 +
ChrX	stalkie_big_nohaplotig	exon	53133175	53133659	99	-	.	ID=FBgn0032957.1.mrna1.exon10;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 2194 2678 +
ChrX	stalkie_big_nohaplotig	exon	53132924	53133048	100	-	.	ID=FBgn0032957.1.mrna1.exon11;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 2679 2803 +
ChrX	stalkie_big_nohaplotig	exon	53132502	53132816	100	-	.	ID=FBgn0032957.1.mrna1.exon12;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 2804 3118 +
ChrX	stalkie_big_nohaplotig	exon	53130294	53130377	100	-	.	ID=FBgn0032957.1.mrna1.exon13;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 3119 3202 +
ChrX	stalkie_big_nohaplotig	exon	53129945	53130066	100	-	.	ID=FBgn0032957.1.mrna1.exon14;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 3203 3324 +
ChrX	stalkie_big_nohaplotig	CDS	53143171	53143412	100	-	0	ID=FBgn0032957.1.mrna1.cds1;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 1 242 +
ChrX	stalkie_big_nohaplotig	CDS	53138588	53138755	99	-	2	ID=FBgn0032957.1.mrna1.cds2;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 243 410 +
ChrX	stalkie_big_nohaplotig	CDS	53138294	53138459	100	-	2	ID=FBgn0032957.1.mrna1.cds3;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 411 576 +
ChrX	stalkie_big_nohaplotig	CDS	53138049	53138226	100	-	0	ID=FBgn0032957.1.mrna1.cds4;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 577 754 +
ChrX	stalkie_big_nohaplotig	CDS	53136042	53136484	99	-	1	ID=FBgn0032957.1.mrna1.cds5;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 755 1197 +
ChrX	stalkie_big_nohaplotig	CDS	53135527	53135924	99	-	0	ID=FBgn0032957.1.mrna1.cds6;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 1198 1595 +
ChrX	stalkie_big_nohaplotig	CDS	53135363	53135463	100	-	2	ID=FBgn0032957.1.mrna1.cds7;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 1596 1696 +
ChrX	stalkie_big_nohaplotig	CDS	53135031	53135225	99	-	1	ID=FBgn0032957.1.mrna1.cds8;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 1697 1891 +
ChrX	stalkie_big_nohaplotig	CDS	53134526	53134827	100	-	1	ID=FBgn0032957.1.mrna1.cds9;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 1892 2193 +
ChrX	stalkie_big_nohaplotig	CDS	53133175	53133659	99	-	0	ID=FBgn0032957.1.mrna1.cds10;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 2194 2678 +
ChrX	stalkie_big_nohaplotig	CDS	53132924	53133048	100	-	2	ID=FBgn0032957.1.mrna1.cds11;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 2679 2803 +
ChrX	stalkie_big_nohaplotig	CDS	53132502	53132816	100	-	1	ID=FBgn0032957.1.mrna1.cds12;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 2804 3118 +
ChrX	stalkie_big_nohaplotig	CDS	53130294	53130377	100	-	1	ID=FBgn0032957.1.mrna1.cds13;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 3119 3202 +
ChrX	stalkie_big_nohaplotig	CDS	53129945	53130066	100	-	1	ID=FBgn0032957.1.mrna1.cds14;Name=FBgn0032957.1;Parent=FBgn0032957.1.mrna1;Target=FBgn0032957.1 3203 3324 +
Chr1	stalkie_big_nohaplotig	mRNA	76993826	76995078	.	+	.	ID=AAEL017378.mrna1;Name=AAEL017378;Parent=AAEL017378.path1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1245;mismatches=8;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	76993826	76995078	99	+	.	ID=AAEL017378.mrna1.exon1;Name=AAEL017378;Parent=AAEL017378.mrna1;Target=AAEL017378 1254 1 .
Chr1	stalkie_big_nohaplotig	CDS	76993826	76995078	99	+	0	ID=AAEL017378.mrna1.cds1;Name=AAEL017378;Parent=AAEL017378.mrna1;Target=AAEL017378 1254 1 .
ChrX	stalkie_big_nohaplotig	mRNA	29887254	29896115	.	+	.	ID=FBgn0031885.1.mrna1;Name=FBgn0031885.1;Parent=FBgn0031885.1.path1;Dir=sensecoverage=40.1;identity=100.0;matches=1584;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	29887254	29887533	100	+	.	ID=FBgn0031885.1.mrna1.exon1;Name=FBgn0031885.1;Parent=FBgn0031885.1.mrna1;Target=FBgn0031885.1 1 280 +
ChrX	stalkie_big_nohaplotig	exon	29894497	29895138	100	+	.	ID=FBgn0031885.1.mrna1.exon2;Name=FBgn0031885.1;Parent=FBgn0031885.1.mrna1;Target=FBgn0031885.1 281 922 +
ChrX	stalkie_big_nohaplotig	exon	29895454	29896115	100	+	.	ID=FBgn0031885.1.mrna1.exon3;Name=FBgn0031885.1;Parent=FBgn0031885.1.mrna1;Target=FBgn0031885.1 923 1584 +
Chr1	stalkie_big_nohaplotig	mRNA	155023705	155024910	.	+	.	ID=FBgn0032650.1.mrna1;Name=FBgn0032650.1;Parent=FBgn0032650.1.path1;Dir=sensecoverage=99.8;identity=98.6;matches=1131;mismatches=4;indels=12;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	155023705	155024709	99	+	.	ID=FBgn0032650.1.mrna1.exon1;Name=FBgn0032650.1;Parent=FBgn0032650.1.mrna1;Target=FBgn0032650.1 1 1005 +
Chr1	stalkie_big_nohaplotig	exon	155024781	155024910	90	+	.	ID=FBgn0032650.1.mrna1.exon2;Name=FBgn0032650.1;Parent=FBgn0032650.1.mrna1;Target=FBgn0032650.1 1006 1147 +
Chr1	stalkie_big_nohaplotig	CDS	155023705	155024709	99	+	0	ID=FBgn0032650.1.mrna1.cds1;Name=FBgn0032650.1;Parent=FBgn0032650.1.mrna1;Target=FBgn0032650.1 1 1005 +
Chr1	stalkie_big_nohaplotig	CDS	155024781	155024909	90	+	0	ID=FBgn0032650.1.mrna1.cds2;Name=FBgn0032650.1;Parent=FBgn0032650.1.mrna1;Target=FBgn0032650.1 1006 1146 +
Chr1	stalkie_big_nohaplotig	mRNA	171408325	171411252	.	-	.	ID=FBgn0030049.1.mrna1;Name=FBgn0030049.1;Parent=FBgn0030049.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1885;mismatches=2;indels=6;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	171410487	171411252	99	-	.	ID=FBgn0030049.1.mrna1.exon1;Name=FBgn0030049.1;Parent=FBgn0030049.1.mrna1;Target=FBgn0030049.1 1 760 +
Chr1	stalkie_big_nohaplotig	exon	171409717	171410397	99	-	.	ID=FBgn0030049.1.mrna1.exon2;Name=FBgn0030049.1;Parent=FBgn0030049.1.mrna1;Target=FBgn0030049.1 761 1441 +
Chr1	stalkie_big_nohaplotig	exon	171408325	171408770	100	-	.	ID=FBgn0030049.1.mrna1.exon3;Name=FBgn0030049.1;Parent=FBgn0030049.1.mrna1;Target=FBgn0030049.1 1442 1887 +
Chr1	stalkie_big_nohaplotig	CDS	171410487	171411252	99	-	0	ID=FBgn0030049.1.mrna1.cds1;Name=FBgn0030049.1;Parent=FBgn0030049.1.mrna1;Target=FBgn0030049.1 1 760 +
Chr1	stalkie_big_nohaplotig	CDS	171409717	171410397	99	-	1	ID=FBgn0030049.1.mrna1.cds2;Name=FBgn0030049.1;Parent=FBgn0030049.1.mrna1;Target=FBgn0030049.1 761 1441 +
Chr1	stalkie_big_nohaplotig	CDS	171408325	171408770	100	-	1	ID=FBgn0030049.1.mrna1.cds3;Name=FBgn0030049.1;Parent=FBgn0030049.1.mrna1;Target=FBgn0030049.1 1442 1887 +
Chr2	stalkie_big_nohaplotig	mRNA	162732906	162738376	.	+	.	ID=FBgn0037442.1.mrna1;Name=FBgn0037442.1;Parent=FBgn0037442.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1656;mismatches=6;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	162732906	162733049	100	+	.	ID=FBgn0037442.1.mrna1.exon1;Name=FBgn0037442.1;Parent=FBgn0037442.1.mrna1;Target=FBgn0037442.1 1 144 +
Chr2	stalkie_big_nohaplotig	exon	162733126	162733295	100	+	.	ID=FBgn0037442.1.mrna1.exon2;Name=FBgn0037442.1;Parent=FBgn0037442.1.mrna1;Target=FBgn0037442.1 145 314 +
Chr2	stalkie_big_nohaplotig	exon	162733380	162733477	100	+	.	ID=FBgn0037442.1.mrna1.exon3;Name=FBgn0037442.1;Parent=FBgn0037442.1.mrna1;Target=FBgn0037442.1 315 412 +
Chr2	stalkie_big_nohaplotig	exon	162733540	162733730	100	+	.	ID=FBgn0037442.1.mrna1.exon4;Name=FBgn0037442.1;Parent=FBgn0037442.1.mrna1;Target=FBgn0037442.1 413 603 +
Chr2	stalkie_big_nohaplotig	exon	162733787	162733979	99	+	.	ID=FBgn0037442.1.mrna1.exon5;Name=FBgn0037442.1;Parent=FBgn0037442.1.mrna1;Target=FBgn0037442.1 604 796 +
Chr2	stalkie_big_nohaplotig	exon	162737338	162737646	99	+	.	ID=FBgn0037442.1.mrna1.exon6;Name=FBgn0037442.1;Parent=FBgn0037442.1.mrna1;Target=FBgn0037442.1 797 1105 +
Chr2	stalkie_big_nohaplotig	exon	162737705	162737849	100	+	.	ID=FBgn0037442.1.mrna1.exon7;Name=FBgn0037442.1;Parent=FBgn0037442.1.mrna1;Target=FBgn0037442.1 1106 1250 +
Chr2	stalkie_big_nohaplotig	exon	162737965	162738376	99	+	.	ID=FBgn0037442.1.mrna1.exon8;Name=FBgn0037442.1;Parent=FBgn0037442.1.mrna1;Target=FBgn0037442.1 1251 1662 +
Chr2	stalkie_big_nohaplotig	CDS	162732906	162733049	100	+	0	ID=FBgn0037442.1.mrna1.cds1;Name=FBgn0037442.1;Parent=FBgn0037442.1.mrna1;Target=FBgn0037442.1 1 144 +
Chr2	stalkie_big_nohaplotig	CDS	162733126	162733295	100	+	0	ID=FBgn0037442.1.mrna1.cds2;Name=FBgn0037442.1;Parent=FBgn0037442.1.mrna1;Target=FBgn0037442.1 145 314 +
Chr2	stalkie_big_nohaplotig	CDS	162733380	162733477	100	+	2	ID=FBgn0037442.1.mrna1.cds3;Name=FBgn0037442.1;Parent=FBgn0037442.1.mrna1;Target=FBgn0037442.1 315 412 +
Chr2	stalkie_big_nohaplotig	CDS	162733540	162733730	100	+	1	ID=FBgn0037442.1.mrna1.cds4;Name=FBgn0037442.1;Parent=FBgn0037442.1.mrna1;Target=FBgn0037442.1 413 603 +
Chr2	stalkie_big_nohaplotig	CDS	162733787	162733979	99	+	0	ID=FBgn0037442.1.mrna1.cds5;Name=FBgn0037442.1;Parent=FBgn0037442.1.mrna1;Target=FBgn0037442.1 604 796 +
Chr2	stalkie_big_nohaplotig	CDS	162737338	162737646	99	+	1	ID=FBgn0037442.1.mrna1.cds6;Name=FBgn0037442.1;Parent=FBgn0037442.1.mrna1;Target=FBgn0037442.1 797 1105 +
Chr2	stalkie_big_nohaplotig	CDS	162737705	162737849	100	+	1	ID=FBgn0037442.1.mrna1.cds7;Name=FBgn0037442.1;Parent=FBgn0037442.1.mrna1;Target=FBgn0037442.1 1106 1250 +
Chr2	stalkie_big_nohaplotig	CDS	162737965	162738376	99	+	2	ID=FBgn0037442.1.mrna1.cds8;Name=FBgn0037442.1;Parent=FBgn0037442.1.mrna1;Target=FBgn0037442.1 1251 1662 +
Chr2	stalkie_big_nohaplotig	mRNA	153532190	153534409	.	+	.	ID=ORF260.mrna1;Name=ORF260;Parent=ORF260.path1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=2211;mismatches=9;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	153532190	153534409	99	+	.	ID=ORF260.mrna1.exon1;Name=ORF260;Parent=ORF260.mrna1;Target=ORF260 2220 1 .
Chr2	stalkie_big_nohaplotig	CDS	153532190	153534409	99	+	0	ID=ORF260.mrna1.cds1;Name=ORF260;Parent=ORF260.mrna1;Target=ORF260 2220 1 .
ChrX	stalkie_big_nohaplotig	mRNA	47930483	47936519	.	-	.	ID=FBgn0032488.1.mrna1;Name=FBgn0032488.1;Parent=FBgn0032488.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1362;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	47936462	47936519	100	-	.	ID=FBgn0032488.1.mrna1.exon1;Name=FBgn0032488.1;Parent=FBgn0032488.1.mrna1;Target=FBgn0032488.1 1 58 +
ChrX	stalkie_big_nohaplotig	exon	47936165	47936336	100	-	.	ID=FBgn0032488.1.mrna1.exon2;Name=FBgn0032488.1;Parent=FBgn0032488.1.mrna1;Target=FBgn0032488.1 59 230 +
ChrX	stalkie_big_nohaplotig	exon	47934645	47934745	100	-	.	ID=FBgn0032488.1.mrna1.exon3;Name=FBgn0032488.1;Parent=FBgn0032488.1.mrna1;Target=FBgn0032488.1 231 331 +
ChrX	stalkie_big_nohaplotig	exon	47934369	47934557	100	-	.	ID=FBgn0032488.1.mrna1.exon4;Name=FBgn0032488.1;Parent=FBgn0032488.1.mrna1;Target=FBgn0032488.1 332 520 +
ChrX	stalkie_big_nohaplotig	exon	47932263	47932492	100	-	.	ID=FBgn0032488.1.mrna1.exon5;Name=FBgn0032488.1;Parent=FBgn0032488.1.mrna1;Target=FBgn0032488.1 521 750 +
ChrX	stalkie_big_nohaplotig	exon	47931894	47932194	100	-	.	ID=FBgn0032488.1.mrna1.exon6;Name=FBgn0032488.1;Parent=FBgn0032488.1.mrna1;Target=FBgn0032488.1 751 1051 +
ChrX	stalkie_big_nohaplotig	exon	47930483	47930793	100	-	.	ID=FBgn0032488.1.mrna1.exon7;Name=FBgn0032488.1;Parent=FBgn0032488.1.mrna1;Target=FBgn0032488.1 1052 1362 +
ChrX	stalkie_big_nohaplotig	CDS	47936462	47936519	100	-	0	ID=FBgn0032488.1.mrna1.cds1;Name=FBgn0032488.1;Parent=FBgn0032488.1.mrna1;Target=FBgn0032488.1 1 58 +
ChrX	stalkie_big_nohaplotig	CDS	47936165	47936336	100	-	1	ID=FBgn0032488.1.mrna1.cds2;Name=FBgn0032488.1;Parent=FBgn0032488.1.mrna1;Target=FBgn0032488.1 59 230 +
ChrX	stalkie_big_nohaplotig	CDS	47934645	47934745	100	-	2	ID=FBgn0032488.1.mrna1.cds3;Name=FBgn0032488.1;Parent=FBgn0032488.1.mrna1;Target=FBgn0032488.1 231 331 +
ChrX	stalkie_big_nohaplotig	CDS	47934369	47934557	100	-	1	ID=FBgn0032488.1.mrna1.cds4;Name=FBgn0032488.1;Parent=FBgn0032488.1.mrna1;Target=FBgn0032488.1 332 520 +
ChrX	stalkie_big_nohaplotig	CDS	47932263	47932492	100	-	1	ID=FBgn0032488.1.mrna1.cds5;Name=FBgn0032488.1;Parent=FBgn0032488.1.mrna1;Target=FBgn0032488.1 521 750 +
ChrX	stalkie_big_nohaplotig	CDS	47931894	47932194	100	-	0	ID=FBgn0032488.1.mrna1.cds6;Name=FBgn0032488.1;Parent=FBgn0032488.1.mrna1;Target=FBgn0032488.1 751 1051 +
ChrX	stalkie_big_nohaplotig	CDS	47930483	47930793	100	-	1	ID=FBgn0032488.1.mrna1.cds7;Name=FBgn0032488.1;Parent=FBgn0032488.1.mrna1;Target=FBgn0032488.1 1052 1362 +
Chr1	stalkie_big_nohaplotig	mRNA	125703091	125704506	.	+	.	ID=FBgn0085388.1.mrna2;Name=FBgn0085388.1;Parent=FBgn0085388.1.path2;Dir=sensecoverage=58.7;identity=99.8;matches=1219;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	125703091	125703340	99	+	.	ID=FBgn0085388.1.mrna2.exon1;Name=FBgn0085388.1;Parent=FBgn0085388.1.mrna2;Target=FBgn0085388.1 859 1108 +
Chr1	stalkie_big_nohaplotig	exon	125703408	125703676	100	+	.	ID=FBgn0085388.1.mrna2.exon2;Name=FBgn0085388.1;Parent=FBgn0085388.1.mrna2;Target=FBgn0085388.1 1109 1377 +
Chr1	stalkie_big_nohaplotig	exon	125703741	125703851	100	+	.	ID=FBgn0085388.1.mrna2.exon3;Name=FBgn0085388.1;Parent=FBgn0085388.1.mrna2;Target=FBgn0085388.1 1378 1488 +
Chr1	stalkie_big_nohaplotig	exon	125703916	125704506	99	+	.	ID=FBgn0085388.1.mrna2.exon4;Name=FBgn0085388.1;Parent=FBgn0085388.1.mrna2;Target=FBgn0085388.1 1489 2079 +
Chr1	stalkie_big_nohaplotig	CDS	125703091	125703340	99	+	0	ID=FBgn0085388.1.mrna2.cds1;Name=FBgn0085388.1;Parent=FBgn0085388.1.mrna2;Target=FBgn0085388.1 859 1108 +
Chr1	stalkie_big_nohaplotig	CDS	125703408	125703676	100	+	1	ID=FBgn0085388.1.mrna2.cds2;Name=FBgn0085388.1;Parent=FBgn0085388.1.mrna2;Target=FBgn0085388.1 1109 1377 +
Chr1	stalkie_big_nohaplotig	CDS	125703741	125703851	100	+	0	ID=FBgn0085388.1.mrna2.cds3;Name=FBgn0085388.1;Parent=FBgn0085388.1.mrna2;Target=FBgn0085388.1 1378 1488 +
Chr1	stalkie_big_nohaplotig	CDS	125703916	125704506	99	+	0	ID=FBgn0085388.1.mrna2.cds4;Name=FBgn0085388.1;Parent=FBgn0085388.1.mrna2;Target=FBgn0085388.1 1489 2079 +
Chr1	stalkie_big_nohaplotig	mRNA	135201879	135203603	.	-	.	ID=ORF497.mrna1;Name=ORF497;Parent=ORF497.path1;Dir=indeterminatecoverage=100.0;identity=98.1;matches=1695;mismatches=30;indels=3;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	135201879	135203603	98	-	.	ID=ORF497.mrna1.exon1;Name=ORF497;Parent=ORF497.mrna1;Target=ORF497 1728 1 .
Chr1	stalkie_big_nohaplotig	CDS	135201879	135203603	98	-	0	ID=ORF497.mrna1.cds1;Name=ORF497;Parent=ORF497.mrna1;Target=ORF497 1728 1 .
Chr1	stalkie_big_nohaplotig	mRNA	135133498	135137509	.	+	.	ID=FBgn0024943.1.mrna1;Name=FBgn0024943.1;Parent=FBgn0024943.1.path1;Dir=sensecoverage=100.0;identity=99.1;matches=3763;mismatches=34;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	135133498	135133524	100	+	.	ID=FBgn0024943.1.mrna1.exon1;Name=FBgn0024943.1;Parent=FBgn0024943.1.mrna1;Target=FBgn0024943.1 2 28 +
Chr1	stalkie_big_nohaplotig	exon	135133678	135137391	99	+	.	ID=FBgn0024943.1.mrna1.exon2;Name=FBgn0024943.1;Parent=FBgn0024943.1.mrna1;Target=FBgn0024943.1 29 3742 +
Chr1	stalkie_big_nohaplotig	exon	135137454	135137509	98	+	.	ID=FBgn0024943.1.mrna1.exon3;Name=FBgn0024943.1;Parent=FBgn0024943.1.mrna1;Target=FBgn0024943.1 3743 3798 +
Chr1	stalkie_big_nohaplotig	CDS	135133500	135133524	100	+	0	ID=FBgn0024943.1.mrna1.cds1;Name=FBgn0024943.1;Parent=FBgn0024943.1.mrna1;Target=FBgn0024943.1 4 28 +
Chr1	stalkie_big_nohaplotig	CDS	135133678	135137391	99	+	1	ID=FBgn0024943.1.mrna1.cds2;Name=FBgn0024943.1;Parent=FBgn0024943.1.mrna1;Target=FBgn0024943.1 29 3742 +
Chr1	stalkie_big_nohaplotig	CDS	135137454	135137509	98	+	1	ID=FBgn0024943.1.mrna1.cds3;Name=FBgn0024943.1;Parent=FBgn0024943.1.mrna1;Target=FBgn0024943.1 3743 3798 +
Chr1	stalkie_big_nohaplotig	mRNA	21258136	21323096	.	+	.	ID=FBgn0063485.1.mrna1;Name=FBgn0063485.1;Parent=FBgn0063485.1.path1;Dir=sensecoverage=57.3;identity=99.8;matches=456;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	21258136	21258228	100	+	.	ID=FBgn0063485.1.mrna1.exon1;Name=FBgn0063485.1;Parent=FBgn0063485.1.mrna1;Target=FBgn0063485.1 1 93 +
Chr1	stalkie_big_nohaplotig	exon	21307540	21307634	100	+	.	ID=FBgn0063485.1.mrna1.exon2;Name=FBgn0063485.1;Parent=FBgn0063485.1.mrna1;Target=FBgn0063485.1 94 188 +
Chr1	stalkie_big_nohaplotig	exon	21321088	21321220	100	+	.	ID=FBgn0063485.1.mrna1.exon3;Name=FBgn0063485.1;Parent=FBgn0063485.1.mrna1;Target=FBgn0063485.1 189 321 +
Chr1	stalkie_big_nohaplotig	exon	21322961	21323096	99	+	.	ID=FBgn0063485.1.mrna1.exon4;Name=FBgn0063485.1;Parent=FBgn0063485.1.mrna1;Target=FBgn0063485.1 322 457 +
Chr1	stalkie_big_nohaplotig	CDS	21258136	21258228	100	+	0	ID=FBgn0063485.1.mrna1.cds1;Name=FBgn0063485.1;Parent=FBgn0063485.1.mrna1;Target=FBgn0063485.1 1 93 +
Chr1	stalkie_big_nohaplotig	CDS	21307540	21307634	100	+	0	ID=FBgn0063485.1.mrna1.cds2;Name=FBgn0063485.1;Parent=FBgn0063485.1.mrna1;Target=FBgn0063485.1 94 188 +
Chr1	stalkie_big_nohaplotig	CDS	21321088	21321220	100	+	2	ID=FBgn0063485.1.mrna1.cds3;Name=FBgn0063485.1;Parent=FBgn0063485.1.mrna1;Target=FBgn0063485.1 189 321 +
Chr1	stalkie_big_nohaplotig	CDS	21322961	21323096	99	+	0	ID=FBgn0063485.1.mrna1.cds4;Name=FBgn0063485.1;Parent=FBgn0063485.1.mrna1;Target=FBgn0063485.1 322 457 +
ChrX	stalkie_big_nohaplotig	mRNA	26605031	26606167	.	+	.	ID=ORF2329.mrna1;Name=ORF2329;Parent=ORF2329.path1;Dir=sensecoverage=100.0;identity=99.1;matches=868;mismatches=8;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	26605031	26605078	100	+	.	ID=ORF2329.mrna1.exon1;Name=ORF2329;Parent=ORF2329.mrna1;Target=ORF2329 1 48 +
ChrX	stalkie_big_nohaplotig	exon	26605210	26605269	100	+	.	ID=ORF2329.mrna1.exon2;Name=ORF2329;Parent=ORF2329.mrna1;Target=ORF2329 49 108 +
ChrX	stalkie_big_nohaplotig	exon	26605400	26606167	98	+	.	ID=ORF2329.mrna1.exon3;Name=ORF2329;Parent=ORF2329.mrna1;Target=ORF2329 109 876 +
ChrX	stalkie_big_nohaplotig	CDS	26605031	26605078	100	+	0	ID=ORF2329.mrna1.cds1;Name=ORF2329;Parent=ORF2329.mrna1;Target=ORF2329 1 48 +
ChrX	stalkie_big_nohaplotig	CDS	26605210	26605269	100	+	0	ID=ORF2329.mrna1.cds2;Name=ORF2329;Parent=ORF2329.mrna1;Target=ORF2329 49 108 +
ChrX	stalkie_big_nohaplotig	CDS	26605400	26606167	98	+	0	ID=ORF2329.mrna1.cds3;Name=ORF2329;Parent=ORF2329.mrna1;Target=ORF2329 109 876 +
ChrX	stalkie_big_nohaplotig	mRNA	26519445	26520194	.	-	.	ID=FBgn0035482.4.mrna1;Name=FBgn0035482.4;Parent=FBgn0035482.4.path1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=741;mismatches=9;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	26519445	26520194	98	-	.	ID=FBgn0035482.4.mrna1.exon1;Name=FBgn0035482.4;Parent=FBgn0035482.4.mrna1;Target=FBgn0035482.4 750 1 .
ChrX	stalkie_big_nohaplotig	CDS	26519445	26520194	98	-	0	ID=FBgn0035482.4.mrna1.cds1;Name=FBgn0035482.4;Parent=FBgn0035482.4.mrna1;Target=FBgn0035482.4 750 1 .
Chr2	stalkie_big_nohaplotig	mRNA	90039080	90042512	.	+	.	ID=ORF478.mrna1;Name=ORF478;Parent=ORF478.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1755;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	90039080	90040018	100	+	.	ID=ORF478.mrna1.exon1;Name=ORF478;Parent=ORF478.mrna1;Target=ORF478 1 939 +
Chr2	stalkie_big_nohaplotig	exon	90041352	90041435	100	+	.	ID=ORF478.mrna1.exon2;Name=ORF478;Parent=ORF478.mrna1;Target=ORF478 940 1023 +
Chr2	stalkie_big_nohaplotig	exon	90041491	90041659	100	+	.	ID=ORF478.mrna1.exon3;Name=ORF478;Parent=ORF478.mrna1;Target=ORF478 1024 1192 +
Chr2	stalkie_big_nohaplotig	exon	90041950	90042512	100	+	.	ID=ORF478.mrna1.exon4;Name=ORF478;Parent=ORF478.mrna1;Target=ORF478 1193 1755 +
Chr2	stalkie_big_nohaplotig	CDS	90039080	90040018	100	+	0	ID=ORF478.mrna1.cds1;Name=ORF478;Parent=ORF478.mrna1;Target=ORF478 1 939 +
Chr2	stalkie_big_nohaplotig	CDS	90041352	90041435	100	+	0	ID=ORF478.mrna1.cds2;Name=ORF478;Parent=ORF478.mrna1;Target=ORF478 940 1023 +
Chr2	stalkie_big_nohaplotig	CDS	90041491	90041659	100	+	0	ID=ORF478.mrna1.cds3;Name=ORF478;Parent=ORF478.mrna1;Target=ORF478 1024 1192 +
Chr2	stalkie_big_nohaplotig	CDS	90041950	90042512	100	+	1	ID=ORF478.mrna1.cds4;Name=ORF478;Parent=ORF478.mrna1;Target=ORF478 1193 1755 +
Chr1	stalkie_big_nohaplotig	mRNA	66758177	66759922	.	+	.	ID=FBgn0010452.1.mrna1;Name=FBgn0010452.1;Parent=FBgn0010452.1.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1744;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	66758177	66759922	99	+	.	ID=FBgn0010452.1.mrna1.exon1;Name=FBgn0010452.1;Parent=FBgn0010452.1.mrna1;Target=FBgn0010452.1 1746 1 .
Chr1	stalkie_big_nohaplotig	CDS	66758177	66759922	99	+	0	ID=FBgn0010452.1.mrna1.cds1;Name=FBgn0010452.1;Parent=FBgn0010452.1.mrna1;Target=FBgn0010452.1 1746 1 .
ChrX	stalkie_big_nohaplotig	mRNA	86908893	86910407	.	-	.	ID=ORF3203.mrna1;Name=ORF3203;Parent=ORF3203.path1;Dir=sensecoverage=99.5;identity=99.7;matches=750;mismatches=2;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	86910378	86910407	100	-	.	ID=ORF3203.mrna1.exon1;Name=ORF3203;Parent=ORF3203.mrna1;Target=ORF3203 1 30 +
ChrX	stalkie_big_nohaplotig	exon	86908893	86909614	99	-	.	ID=ORF3203.mrna1.exon2;Name=ORF3203;Parent=ORF3203.mrna1;Target=ORF3203 31 752 +
ChrX	stalkie_big_nohaplotig	CDS	86908895	86909575	100	-	0	ID=ORF3203.mrna1.cds1;Name=ORF3203;Parent=ORF3203.mrna1;Target=ORF3203 70 750 +
Chr1	stalkie_big_nohaplotig	mRNA	153872018	153873748	.	+	.	ID=ORF909.mrna1;Name=ORF909;Parent=ORF909.path1;Dir=sensecoverage=100.0;identity=98.1;matches=1327;mismatches=26;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	153872018	153872119	99	+	.	ID=ORF909.mrna1.exon1;Name=ORF909;Parent=ORF909.mrna1;Target=ORF909 1 102 +
Chr1	stalkie_big_nohaplotig	exon	153872255	153872427	97	+	.	ID=ORF909.mrna1.exon2;Name=ORF909;Parent=ORF909.mrna1;Target=ORF909 103 275 +
Chr1	stalkie_big_nohaplotig	exon	153872481	153872870	97	+	.	ID=ORF909.mrna1.exon3;Name=ORF909;Parent=ORF909.mrna1;Target=ORF909 276 665 +
Chr1	stalkie_big_nohaplotig	exon	153872929	153873162	97	+	.	ID=ORF909.mrna1.exon4;Name=ORF909;Parent=ORF909.mrna1;Target=ORF909 666 899 +
Chr1	stalkie_big_nohaplotig	exon	153873241	153873501	98	+	.	ID=ORF909.mrna1.exon5;Name=ORF909;Parent=ORF909.mrna1;Target=ORF909 900 1160 +
Chr1	stalkie_big_nohaplotig	exon	153873556	153873748	98	+	.	ID=ORF909.mrna1.exon6;Name=ORF909;Parent=ORF909.mrna1;Target=ORF909 1161 1353 +
Chr1	stalkie_big_nohaplotig	CDS	153872018	153872119	99	+	0	ID=ORF909.mrna1.cds1;Name=ORF909;Parent=ORF909.mrna1;Target=ORF909 1 102 +
Chr1	stalkie_big_nohaplotig	CDS	153872255	153872427	97	+	0	ID=ORF909.mrna1.cds2;Name=ORF909;Parent=ORF909.mrna1;Target=ORF909 103 275 +
Chr1	stalkie_big_nohaplotig	CDS	153872481	153872870	97	+	2	ID=ORF909.mrna1.cds3;Name=ORF909;Parent=ORF909.mrna1;Target=ORF909 276 665 +
Chr1	stalkie_big_nohaplotig	CDS	153872929	153873162	97	+	2	ID=ORF909.mrna1.cds4;Name=ORF909;Parent=ORF909.mrna1;Target=ORF909 666 899 +
Chr1	stalkie_big_nohaplotig	CDS	153873241	153873501	98	+	2	ID=ORF909.mrna1.cds5;Name=ORF909;Parent=ORF909.mrna1;Target=ORF909 900 1160 +
Chr1	stalkie_big_nohaplotig	CDS	153873556	153873748	98	+	2	ID=ORF909.mrna1.cds6;Name=ORF909;Parent=ORF909.mrna1;Target=ORF909 1161 1353 +
Chr1	stalkie_big_nohaplotig	mRNA	153804022	153804783	.	+	.	ID=ORF3100.mrna1;Name=ORF3100;Parent=ORF3100.path1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=754;mismatches=2;indels=18;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	153804022	153804783	97	+	.	ID=ORF3100.mrna1.exon1;Name=ORF3100;Parent=ORF3100.mrna1;Target=ORF3100 768 1 .
Chr1	stalkie_big_nohaplotig	CDS	153804022	153804783	97	+	0	ID=ORF3100.mrna1.cds1;Name=ORF3100;Parent=ORF3100.mrna1;Target=ORF3100 768 1 .
Chr1	stalkie_big_nohaplotig	mRNA	154000436	154006561	.	-	.	ID=FBgn0015024.6.mrna1;Name=FBgn0015024.6;Parent=FBgn0015024.6.path1;Dir=sensecoverage=100.0;identity=98.0;matches=1094;mismatches=22;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	154006498	154006561	100	-	.	ID=FBgn0015024.6.mrna1.exon1;Name=FBgn0015024.6;Parent=FBgn0015024.6.mrna1;Target=FBgn0015024.6 1 64 +
Chr1	stalkie_big_nohaplotig	exon	154000436	154001487	97	-	.	ID=FBgn0015024.6.mrna1.exon2;Name=FBgn0015024.6;Parent=FBgn0015024.6.mrna1;Target=FBgn0015024.6 65 1116 +
Chr1	stalkie_big_nohaplotig	CDS	154006498	154006561	100	-	0	ID=FBgn0015024.6.mrna1.cds1;Name=FBgn0015024.6;Parent=FBgn0015024.6.mrna1;Target=FBgn0015024.6 1 64 +
Chr1	stalkie_big_nohaplotig	CDS	154000436	154001487	97	-	1	ID=FBgn0015024.6.mrna1.cds2;Name=FBgn0015024.6;Parent=FBgn0015024.6.mrna1;Target=FBgn0015024.6 65 1116 +
ChrX	stalkie_big_nohaplotig	mRNA	58705534	58717489	.	+	.	ID=ORF393.mrna1;Name=ORF393;Parent=ORF393.path1;Dir=sensecoverage=100.0;identity=98.3;matches=1872;mismatches=27;indels=6;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	58705534	58705816	99	+	.	ID=ORF393.mrna1.exon1;Name=ORF393;Parent=ORF393.mrna1;Target=ORF393 1 283 +
ChrX	stalkie_big_nohaplotig	exon	58706196	58706269	100	+	.	ID=ORF393.mrna1.exon2;Name=ORF393;Parent=ORF393.mrna1;Target=ORF393 284 357 +
ChrX	stalkie_big_nohaplotig	exon	58715738	58715768	100	+	.	ID=ORF393.mrna1.exon3;Name=ORF393;Parent=ORF393.mrna1;Target=ORF393 358 388 +
ChrX	stalkie_big_nohaplotig	exon	58715902	58716350	97	+	.	ID=ORF393.mrna1.exon4;Name=ORF393;Parent=ORF393.mrna1;Target=ORF393 389 837 +
ChrX	stalkie_big_nohaplotig	exon	58716428	58717489	97	+	.	ID=ORF393.mrna1.exon5;Name=ORF393;Parent=ORF393.mrna1;Target=ORF393 838 1905 +
ChrX	stalkie_big_nohaplotig	CDS	58705534	58705816	99	+	0	ID=ORF393.mrna1.cds1;Name=ORF393;Parent=ORF393.mrna1;Target=ORF393 1 283 +
ChrX	stalkie_big_nohaplotig	CDS	58706196	58706269	100	+	1	ID=ORF393.mrna1.cds2;Name=ORF393;Parent=ORF393.mrna1;Target=ORF393 284 357 +
ChrX	stalkie_big_nohaplotig	CDS	58715738	58715768	100	+	0	ID=ORF393.mrna1.cds3;Name=ORF393;Parent=ORF393.mrna1;Target=ORF393 358 388 +
ChrX	stalkie_big_nohaplotig	CDS	58715902	58716350	97	+	1	ID=ORF393.mrna1.cds4;Name=ORF393;Parent=ORF393.mrna1;Target=ORF393 389 837 +
ChrX	stalkie_big_nohaplotig	CDS	58716428	58717489	97	+	0	ID=ORF393.mrna1.cds5;Name=ORF393;Parent=ORF393.mrna1;Target=ORF393 838 1905 +
Chr1	stalkie_big_nohaplotig	mRNA	171357323	171357428	.	+	.	ID=FBgn0016697.3.mrna1;Name=FBgn0016697.3;Parent=FBgn0016697.3.path1;Dir=indeterminatecoverage=12.3;identity=100.0;matches=106;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	171357323	171357428	100	+	.	ID=FBgn0016697.3.mrna1.exon1;Name=FBgn0016697.3;Parent=FBgn0016697.3.mrna1;Target=FBgn0016697.3 106 1 .
Chr1	stalkie_big_nohaplotig	CDS	171357323	171357428	100	+	0	ID=FBgn0016697.3.mrna1.cds1;Name=FBgn0016697.3;Parent=FBgn0016697.3.mrna1;Target=FBgn0016697.3 106 1 .
Chr2	stalkie_big_nohaplotig	mRNA	33863402	33865459	.	+	.	ID=FBgn0034307.1.mrna1;Name=FBgn0034307.1;Parent=FBgn0034307.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1944;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	33863402	33863876	100	+	.	ID=FBgn0034307.1.mrna1.exon1;Name=FBgn0034307.1;Parent=FBgn0034307.1.mrna1;Target=FBgn0034307.1 1 475 +
Chr2	stalkie_big_nohaplotig	exon	33863937	33864389	100	+	.	ID=FBgn0034307.1.mrna1.exon2;Name=FBgn0034307.1;Parent=FBgn0034307.1.mrna1;Target=FBgn0034307.1 476 928 +
Chr2	stalkie_big_nohaplotig	exon	33864444	33865459	100	+	.	ID=FBgn0034307.1.mrna1.exon3;Name=FBgn0034307.1;Parent=FBgn0034307.1.mrna1;Target=FBgn0034307.1 929 1944 +
Chr2	stalkie_big_nohaplotig	CDS	33863402	33863876	100	+	0	ID=FBgn0034307.1.mrna1.cds1;Name=FBgn0034307.1;Parent=FBgn0034307.1.mrna1;Target=FBgn0034307.1 1 475 +
Chr2	stalkie_big_nohaplotig	CDS	33863937	33864389	100	+	1	ID=FBgn0034307.1.mrna1.cds2;Name=FBgn0034307.1;Parent=FBgn0034307.1.mrna1;Target=FBgn0034307.1 476 928 +
Chr2	stalkie_big_nohaplotig	CDS	33864444	33865459	100	+	1	ID=FBgn0034307.1.mrna1.cds3;Name=FBgn0034307.1;Parent=FBgn0034307.1.mrna1;Target=FBgn0034307.1 929 1944 +
Chr2	stalkie_big_nohaplotig	mRNA	34944486	34946481	.	+	.	ID=FBgn0033347.1.mrna1;Name=FBgn0033347.1;Parent=FBgn0033347.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=830;mismatches=4;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	34944486	34945205	99	+	.	ID=FBgn0033347.1.mrna1.exon1;Name=FBgn0033347.1;Parent=FBgn0033347.1.mrna1;Target=FBgn0033347.1 1 720 +
Chr2	stalkie_big_nohaplotig	exon	34946368	34946481	100	+	.	ID=FBgn0033347.1.mrna1.exon2;Name=FBgn0033347.1;Parent=FBgn0033347.1.mrna1;Target=FBgn0033347.1 721 834 +
Chr2	stalkie_big_nohaplotig	CDS	34944486	34945205	99	+	0	ID=FBgn0033347.1.mrna1.cds1;Name=FBgn0033347.1;Parent=FBgn0033347.1.mrna1;Target=FBgn0033347.1 1 720 +
Chr2	stalkie_big_nohaplotig	CDS	34946368	34946481	100	+	0	ID=FBgn0033347.1.mrna1.cds2;Name=FBgn0033347.1;Parent=FBgn0033347.1.mrna1;Target=FBgn0033347.1 721 834 +
Chr2	stalkie_big_nohaplotig	mRNA	34920272	34921640	.	+	.	ID=FBgn0259985.1.mrna1;Name=FBgn0259985.1;Parent=FBgn0259985.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1055;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	34920272	34920297	100	+	.	ID=FBgn0259985.1.mrna1.exon1;Name=FBgn0259985.1;Parent=FBgn0259985.1.mrna1;Target=FBgn0259985.1 1 26 +
Chr2	stalkie_big_nohaplotig	exon	34920354	34920463	100	+	.	ID=FBgn0259985.1.mrna1.exon2;Name=FBgn0259985.1;Parent=FBgn0259985.1.mrna1;Target=FBgn0259985.1 27 136 +
Chr2	stalkie_big_nohaplotig	exon	34920524	34920623	100	+	.	ID=FBgn0259985.1.mrna1.exon3;Name=FBgn0259985.1;Parent=FBgn0259985.1.mrna1;Target=FBgn0259985.1 137 236 +
Chr2	stalkie_big_nohaplotig	exon	34920704	34920866	99	+	.	ID=FBgn0259985.1.mrna1.exon4;Name=FBgn0259985.1;Parent=FBgn0259985.1.mrna1;Target=FBgn0259985.1 237 399 +
Chr2	stalkie_big_nohaplotig	exon	34920919	34921396	100	+	.	ID=FBgn0259985.1.mrna1.exon5;Name=FBgn0259985.1;Parent=FBgn0259985.1.mrna1;Target=FBgn0259985.1 400 877 +
Chr2	stalkie_big_nohaplotig	exon	34921462	34921640	100	+	.	ID=FBgn0259985.1.mrna1.exon6;Name=FBgn0259985.1;Parent=FBgn0259985.1.mrna1;Target=FBgn0259985.1 878 1056 +
Chr2	stalkie_big_nohaplotig	CDS	34920272	34920297	100	+	0	ID=FBgn0259985.1.mrna1.cds1;Name=FBgn0259985.1;Parent=FBgn0259985.1.mrna1;Target=FBgn0259985.1 1 26 +
Chr2	stalkie_big_nohaplotig	CDS	34920354	34920463	100	+	2	ID=FBgn0259985.1.mrna1.cds2;Name=FBgn0259985.1;Parent=FBgn0259985.1.mrna1;Target=FBgn0259985.1 27 136 +
Chr2	stalkie_big_nohaplotig	CDS	34920524	34920623	100	+	1	ID=FBgn0259985.1.mrna1.cds3;Name=FBgn0259985.1;Parent=FBgn0259985.1.mrna1;Target=FBgn0259985.1 137 236 +
Chr2	stalkie_big_nohaplotig	CDS	34920704	34920866	99	+	2	ID=FBgn0259985.1.mrna1.cds4;Name=FBgn0259985.1;Parent=FBgn0259985.1.mrna1;Target=FBgn0259985.1 237 399 +
Chr2	stalkie_big_nohaplotig	CDS	34920919	34921396	100	+	0	ID=FBgn0259985.1.mrna1.cds5;Name=FBgn0259985.1;Parent=FBgn0259985.1.mrna1;Target=FBgn0259985.1 400 877 +
Chr2	stalkie_big_nohaplotig	CDS	34921462	34921640	100	+	1	ID=FBgn0259985.1.mrna1.cds6;Name=FBgn0259985.1;Parent=FBgn0259985.1.mrna1;Target=FBgn0259985.1 878 1056 +
Chr2	stalkie_big_nohaplotig	mRNA	35043286	35045639	.	+	.	ID=FBgn0015949.1.mrna1;Name=FBgn0015949.1;Parent=FBgn0015949.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2001;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	35043286	35044066	100	+	.	ID=FBgn0015949.1.mrna1.exon1;Name=FBgn0015949.1;Parent=FBgn0015949.1.mrna1;Target=FBgn0015949.1 1 781 +
Chr2	stalkie_big_nohaplotig	exon	35044131	35044327	100	+	.	ID=FBgn0015949.1.mrna1.exon2;Name=FBgn0015949.1;Parent=FBgn0015949.1.mrna1;Target=FBgn0015949.1 782 978 +
Chr2	stalkie_big_nohaplotig	exon	35044394	35044608	100	+	.	ID=FBgn0015949.1.mrna1.exon3;Name=FBgn0015949.1;Parent=FBgn0015949.1.mrna1;Target=FBgn0015949.1 979 1193 +
Chr2	stalkie_big_nohaplotig	exon	35044678	35045029	100	+	.	ID=FBgn0015949.1.mrna1.exon4;Name=FBgn0015949.1;Parent=FBgn0015949.1.mrna1;Target=FBgn0015949.1 1194 1545 +
Chr2	stalkie_big_nohaplotig	exon	35045105	35045338	100	+	.	ID=FBgn0015949.1.mrna1.exon5;Name=FBgn0015949.1;Parent=FBgn0015949.1.mrna1;Target=FBgn0015949.1 1546 1779 +
Chr2	stalkie_big_nohaplotig	exon	35045418	35045639	100	+	.	ID=FBgn0015949.1.mrna1.exon6;Name=FBgn0015949.1;Parent=FBgn0015949.1.mrna1;Target=FBgn0015949.1 1780 2001 +
Chr2	stalkie_big_nohaplotig	CDS	35043286	35044066	100	+	0	ID=FBgn0015949.1.mrna1.cds1;Name=FBgn0015949.1;Parent=FBgn0015949.1.mrna1;Target=FBgn0015949.1 1 781 +
Chr2	stalkie_big_nohaplotig	CDS	35044131	35044327	100	+	1	ID=FBgn0015949.1.mrna1.cds2;Name=FBgn0015949.1;Parent=FBgn0015949.1.mrna1;Target=FBgn0015949.1 782 978 +
Chr2	stalkie_big_nohaplotig	CDS	35044394	35044608	100	+	0	ID=FBgn0015949.1.mrna1.cds3;Name=FBgn0015949.1;Parent=FBgn0015949.1.mrna1;Target=FBgn0015949.1 979 1193 +
Chr2	stalkie_big_nohaplotig	CDS	35044678	35045029	100	+	2	ID=FBgn0015949.1.mrna1.cds4;Name=FBgn0015949.1;Parent=FBgn0015949.1.mrna1;Target=FBgn0015949.1 1194 1545 +
Chr2	stalkie_big_nohaplotig	CDS	35045105	35045338	100	+	0	ID=FBgn0015949.1.mrna1.cds5;Name=FBgn0015949.1;Parent=FBgn0015949.1.mrna1;Target=FBgn0015949.1 1546 1779 +
Chr2	stalkie_big_nohaplotig	CDS	35045418	35045639	100	+	0	ID=FBgn0015949.1.mrna1.cds6;Name=FBgn0015949.1;Parent=FBgn0015949.1.mrna1;Target=FBgn0015949.1 1780 2001 +
ChrX	stalkie_big_nohaplotig	mRNA	26848895	26850223	.	+	.	ID=FBgn0031375.1.mrna1;Name=FBgn0031375.1;Parent=FBgn0031375.1.path1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1325;mismatches=4;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	26848895	26850223	99	+	.	ID=FBgn0031375.1.mrna1.exon1;Name=FBgn0031375.1;Parent=FBgn0031375.1.mrna1;Target=FBgn0031375.1 1329 1 .
ChrX	stalkie_big_nohaplotig	CDS	26848895	26850223	99	+	0	ID=FBgn0031375.1.mrna1.cds1;Name=FBgn0031375.1;Parent=FBgn0031375.1.mrna1;Target=FBgn0031375.1 1329 1 .
ChrX	stalkie_big_nohaplotig	mRNA	26763032	26766001	.	-	.	ID=FBgn0031376.1.mrna1;Name=FBgn0031376.1;Parent=FBgn0031376.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=783;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	26765469	26766001	100	-	.	ID=FBgn0031376.1.mrna1.exon1;Name=FBgn0031376.1;Parent=FBgn0031376.1.mrna1;Target=FBgn0031376.1 1 533 +
ChrX	stalkie_big_nohaplotig	exon	26765281	26765391	100	-	.	ID=FBgn0031376.1.mrna1.exon2;Name=FBgn0031376.1;Parent=FBgn0031376.1.mrna1;Target=FBgn0031376.1 534 644 +
ChrX	stalkie_big_nohaplotig	exon	26763032	26763170	100	-	.	ID=FBgn0031376.1.mrna1.exon3;Name=FBgn0031376.1;Parent=FBgn0031376.1.mrna1;Target=FBgn0031376.1 645 783 +
ChrX	stalkie_big_nohaplotig	CDS	26765469	26766001	100	-	0	ID=FBgn0031376.1.mrna1.cds1;Name=FBgn0031376.1;Parent=FBgn0031376.1.mrna1;Target=FBgn0031376.1 1 533 +
ChrX	stalkie_big_nohaplotig	CDS	26765281	26765391	100	-	2	ID=FBgn0031376.1.mrna1.cds2;Name=FBgn0031376.1;Parent=FBgn0031376.1.mrna1;Target=FBgn0031376.1 534 644 +
ChrX	stalkie_big_nohaplotig	CDS	26763032	26763170	100	-	2	ID=FBgn0031376.1.mrna1.cds3;Name=FBgn0031376.1;Parent=FBgn0031376.1.mrna1;Target=FBgn0031376.1 645 783 +
Chr2	stalkie_big_nohaplotig	mRNA	120747449	120750072	.	+	.	ID=FBgn0031489.2.mrna1;Name=FBgn0031489.2;Parent=FBgn0031489.2.path1;Dir=sensecoverage=100.0;identity=99.9;matches=935;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	120747449	120747604	100	+	.	ID=FBgn0031489.2.mrna1.exon1;Name=FBgn0031489.2;Parent=FBgn0031489.2.mrna1;Target=FBgn0031489.2 1 156 +
Chr2	stalkie_big_nohaplotig	exon	120748511	120748642	99	+	.	ID=FBgn0031489.2.mrna1.exon2;Name=FBgn0031489.2;Parent=FBgn0031489.2.mrna1;Target=FBgn0031489.2 157 288 +
Chr2	stalkie_big_nohaplotig	exon	120748700	120748909	100	+	.	ID=FBgn0031489.2.mrna1.exon3;Name=FBgn0031489.2;Parent=FBgn0031489.2.mrna1;Target=FBgn0031489.2 289 498 +
Chr2	stalkie_big_nohaplotig	exon	120748970	120749108	100	+	.	ID=FBgn0031489.2.mrna1.exon4;Name=FBgn0031489.2;Parent=FBgn0031489.2.mrna1;Target=FBgn0031489.2 499 637 +
Chr2	stalkie_big_nohaplotig	exon	120749180	120749373	100	+	.	ID=FBgn0031489.2.mrna1.exon5;Name=FBgn0031489.2;Parent=FBgn0031489.2.mrna1;Target=FBgn0031489.2 638 831 +
Chr2	stalkie_big_nohaplotig	exon	120749968	120750072	100	+	.	ID=FBgn0031489.2.mrna1.exon6;Name=FBgn0031489.2;Parent=FBgn0031489.2.mrna1;Target=FBgn0031489.2 832 936 +
Chr2	stalkie_big_nohaplotig	CDS	120747449	120747604	100	+	0	ID=FBgn0031489.2.mrna1.cds1;Name=FBgn0031489.2;Parent=FBgn0031489.2.mrna1;Target=FBgn0031489.2 1 156 +
Chr2	stalkie_big_nohaplotig	CDS	120748511	120748642	99	+	0	ID=FBgn0031489.2.mrna1.cds2;Name=FBgn0031489.2;Parent=FBgn0031489.2.mrna1;Target=FBgn0031489.2 157 288 +
Chr2	stalkie_big_nohaplotig	CDS	120748700	120748909	100	+	0	ID=FBgn0031489.2.mrna1.cds3;Name=FBgn0031489.2;Parent=FBgn0031489.2.mrna1;Target=FBgn0031489.2 289 498 +
Chr2	stalkie_big_nohaplotig	CDS	120748970	120749108	100	+	0	ID=FBgn0031489.2.mrna1.cds4;Name=FBgn0031489.2;Parent=FBgn0031489.2.mrna1;Target=FBgn0031489.2 499 637 +
Chr2	stalkie_big_nohaplotig	CDS	120749180	120749373	100	+	1	ID=FBgn0031489.2.mrna1.cds5;Name=FBgn0031489.2;Parent=FBgn0031489.2.mrna1;Target=FBgn0031489.2 638 831 +
Chr2	stalkie_big_nohaplotig	CDS	120749968	120750072	100	+	0	ID=FBgn0031489.2.mrna1.cds6;Name=FBgn0031489.2;Parent=FBgn0031489.2.mrna1;Target=FBgn0031489.2 832 936 +
Chr2	stalkie_big_nohaplotig	mRNA	120681449	120683692	.	+	.	ID=FBgn0039465.1.mrna1;Name=FBgn0039465.1;Parent=FBgn0039465.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=654;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	120681449	120681523	100	+	.	ID=FBgn0039465.1.mrna1.exon1;Name=FBgn0039465.1;Parent=FBgn0039465.1.mrna1;Target=FBgn0039465.1 1 75 +
Chr2	stalkie_big_nohaplotig	exon	120681899	120682066	100	+	.	ID=FBgn0039465.1.mrna1.exon2;Name=FBgn0039465.1;Parent=FBgn0039465.1.mrna1;Target=FBgn0039465.1 76 243 +
Chr2	stalkie_big_nohaplotig	exon	120683175	120683513	100	+	.	ID=FBgn0039465.1.mrna1.exon3;Name=FBgn0039465.1;Parent=FBgn0039465.1.mrna1;Target=FBgn0039465.1 244 582 +
Chr2	stalkie_big_nohaplotig	exon	120683621	120683692	100	+	.	ID=FBgn0039465.1.mrna1.exon4;Name=FBgn0039465.1;Parent=FBgn0039465.1.mrna1;Target=FBgn0039465.1 583 654 +
Chr2	stalkie_big_nohaplotig	CDS	120681449	120681523	100	+	0	ID=FBgn0039465.1.mrna1.cds1;Name=FBgn0039465.1;Parent=FBgn0039465.1.mrna1;Target=FBgn0039465.1 1 75 +
Chr2	stalkie_big_nohaplotig	CDS	120681899	120682066	100	+	0	ID=FBgn0039465.1.mrna1.cds2;Name=FBgn0039465.1;Parent=FBgn0039465.1.mrna1;Target=FBgn0039465.1 76 243 +
Chr2	stalkie_big_nohaplotig	CDS	120683175	120683513	100	+	0	ID=FBgn0039465.1.mrna1.cds3;Name=FBgn0039465.1;Parent=FBgn0039465.1.mrna1;Target=FBgn0039465.1 244 582 +
Chr2	stalkie_big_nohaplotig	CDS	120683621	120683692	100	+	0	ID=FBgn0039465.1.mrna1.cds4;Name=FBgn0039465.1;Parent=FBgn0039465.1.mrna1;Target=FBgn0039465.1 583 654 +
Chr2	stalkie_big_nohaplotig	mRNA	78382967	78384543	.	-	.	ID=FBgn0037654.1.mrna1;Name=FBgn0037654.1;Parent=FBgn0037654.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1396;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	78384460	78384543	100	-	.	ID=FBgn0037654.1.mrna1.exon1;Name=FBgn0037654.1;Parent=FBgn0037654.1.mrna1;Target=FBgn0037654.1 1 84 +
Chr2	stalkie_big_nohaplotig	exon	78384209	78384403	100	-	.	ID=FBgn0037654.1.mrna1.exon2;Name=FBgn0037654.1;Parent=FBgn0037654.1.mrna1;Target=FBgn0037654.1 85 279 +
Chr2	stalkie_big_nohaplotig	exon	78383134	78384142	99	-	.	ID=FBgn0037654.1.mrna1.exon3;Name=FBgn0037654.1;Parent=FBgn0037654.1.mrna1;Target=FBgn0037654.1 280 1288 +
Chr2	stalkie_big_nohaplotig	exon	78382967	78383076	100	-	.	ID=FBgn0037654.1.mrna1.exon4;Name=FBgn0037654.1;Parent=FBgn0037654.1.mrna1;Target=FBgn0037654.1 1289 1398 +
Chr2	stalkie_big_nohaplotig	CDS	78384460	78384543	100	-	0	ID=FBgn0037654.1.mrna1.cds1;Name=FBgn0037654.1;Parent=FBgn0037654.1.mrna1;Target=FBgn0037654.1 1 84 +
Chr2	stalkie_big_nohaplotig	CDS	78384209	78384403	100	-	0	ID=FBgn0037654.1.mrna1.cds2;Name=FBgn0037654.1;Parent=FBgn0037654.1.mrna1;Target=FBgn0037654.1 85 279 +
Chr2	stalkie_big_nohaplotig	CDS	78383134	78384142	99	-	0	ID=FBgn0037654.1.mrna1.cds3;Name=FBgn0037654.1;Parent=FBgn0037654.1.mrna1;Target=FBgn0037654.1 280 1288 +
Chr2	stalkie_big_nohaplotig	CDS	78382967	78383076	100	-	1	ID=FBgn0037654.1.mrna1.cds4;Name=FBgn0037654.1;Parent=FBgn0037654.1.mrna1;Target=FBgn0037654.1 1289 1398 +
Chr2	stalkie_big_nohaplotig	mRNA	78371863	78378517	.	+	.	ID=FBgn0037655.1.mrna1;Name=FBgn0037655.1;Parent=FBgn0037655.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1668;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	78371863	78371881	100	+	.	ID=FBgn0037655.1.mrna1.exon1;Name=FBgn0037655.1;Parent=FBgn0037655.1.mrna1;Target=FBgn0037655.1 1 19 +
Chr2	stalkie_big_nohaplotig	exon	78371994	78372418	99	+	.	ID=FBgn0037655.1.mrna1.exon2;Name=FBgn0037655.1;Parent=FBgn0037655.1.mrna1;Target=FBgn0037655.1 20 444 +
Chr2	stalkie_big_nohaplotig	exon	78372559	78372822	100	+	.	ID=FBgn0037655.1.mrna1.exon3;Name=FBgn0037655.1;Parent=FBgn0037655.1.mrna1;Target=FBgn0037655.1 445 708 +
Chr2	stalkie_big_nohaplotig	exon	78372878	78373156	99	+	.	ID=FBgn0037655.1.mrna1.exon4;Name=FBgn0037655.1;Parent=FBgn0037655.1.mrna1;Target=FBgn0037655.1 709 987 +
Chr2	stalkie_big_nohaplotig	exon	78373226	78373374	100	+	.	ID=FBgn0037655.1.mrna1.exon5;Name=FBgn0037655.1;Parent=FBgn0037655.1.mrna1;Target=FBgn0037655.1 988 1136 +
Chr2	stalkie_big_nohaplotig	exon	78377983	78378517	99	+	.	ID=FBgn0037655.1.mrna1.exon6;Name=FBgn0037655.1;Parent=FBgn0037655.1.mrna1;Target=FBgn0037655.1 1137 1671 +
Chr2	stalkie_big_nohaplotig	CDS	78371863	78371881	100	+	0	ID=FBgn0037655.1.mrna1.cds1;Name=FBgn0037655.1;Parent=FBgn0037655.1.mrna1;Target=FBgn0037655.1 1 19 +
Chr2	stalkie_big_nohaplotig	CDS	78371994	78372418	99	+	1	ID=FBgn0037655.1.mrna1.cds2;Name=FBgn0037655.1;Parent=FBgn0037655.1.mrna1;Target=FBgn0037655.1 20 444 +
Chr2	stalkie_big_nohaplotig	CDS	78372559	78372822	100	+	0	ID=FBgn0037655.1.mrna1.cds3;Name=FBgn0037655.1;Parent=FBgn0037655.1.mrna1;Target=FBgn0037655.1 445 708 +
Chr2	stalkie_big_nohaplotig	CDS	78372878	78373156	99	+	0	ID=FBgn0037655.1.mrna1.cds4;Name=FBgn0037655.1;Parent=FBgn0037655.1.mrna1;Target=FBgn0037655.1 709 987 +
Chr2	stalkie_big_nohaplotig	CDS	78373226	78373374	100	+	0	ID=FBgn0037655.1.mrna1.cds5;Name=FBgn0037655.1;Parent=FBgn0037655.1.mrna1;Target=FBgn0037655.1 988 1136 +
Chr2	stalkie_big_nohaplotig	CDS	78377983	78378517	99	+	2	ID=FBgn0037655.1.mrna1.cds6;Name=FBgn0037655.1;Parent=FBgn0037655.1.mrna1;Target=FBgn0037655.1 1137 1671 +
Chr2	stalkie_big_nohaplotig	mRNA	78397242	78399550	.	+	.	ID=FBgn0037881.1.mrna1;Name=FBgn0037881.1;Parent=FBgn0037881.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=2051;mismatches=7;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	78397242	78397326	100	+	.	ID=FBgn0037881.1.mrna1.exon1;Name=FBgn0037881.1;Parent=FBgn0037881.1.mrna1;Target=FBgn0037881.1 1 85 +
Chr2	stalkie_big_nohaplotig	exon	78397393	78398087	99	+	.	ID=FBgn0037881.1.mrna1.exon2;Name=FBgn0037881.1;Parent=FBgn0037881.1.mrna1;Target=FBgn0037881.1 86 780 +
Chr2	stalkie_big_nohaplotig	exon	78398144	78398603	99	+	.	ID=FBgn0037881.1.mrna1.exon3;Name=FBgn0037881.1;Parent=FBgn0037881.1.mrna1;Target=FBgn0037881.1 781 1240 +
Chr2	stalkie_big_nohaplotig	exon	78398679	78399318	99	+	.	ID=FBgn0037881.1.mrna1.exon4;Name=FBgn0037881.1;Parent=FBgn0037881.1.mrna1;Target=FBgn0037881.1 1241 1880 +
Chr2	stalkie_big_nohaplotig	exon	78399373	78399550	100	+	.	ID=FBgn0037881.1.mrna1.exon5;Name=FBgn0037881.1;Parent=FBgn0037881.1.mrna1;Target=FBgn0037881.1 1881 2058 +
Chr2	stalkie_big_nohaplotig	CDS	78397242	78397326	100	+	0	ID=FBgn0037881.1.mrna1.cds1;Name=FBgn0037881.1;Parent=FBgn0037881.1.mrna1;Target=FBgn0037881.1 1 85 +
Chr2	stalkie_big_nohaplotig	CDS	78397393	78398087	99	+	1	ID=FBgn0037881.1.mrna1.cds2;Name=FBgn0037881.1;Parent=FBgn0037881.1.mrna1;Target=FBgn0037881.1 86 780 +
Chr2	stalkie_big_nohaplotig	CDS	78398144	78398603	99	+	0	ID=FBgn0037881.1.mrna1.cds3;Name=FBgn0037881.1;Parent=FBgn0037881.1.mrna1;Target=FBgn0037881.1 781 1240 +
Chr2	stalkie_big_nohaplotig	CDS	78398679	78399318	99	+	1	ID=FBgn0037881.1.mrna1.cds4;Name=FBgn0037881.1;Parent=FBgn0037881.1.mrna1;Target=FBgn0037881.1 1241 1880 +
Chr2	stalkie_big_nohaplotig	CDS	78399373	78399550	100	+	2	ID=FBgn0037881.1.mrna1.cds5;Name=FBgn0037881.1;Parent=FBgn0037881.1.mrna1;Target=FBgn0037881.1 1881 2058 +
Chr2	stalkie_big_nohaplotig	mRNA	78456036	78457899	.	+	.	ID=FBgn0260243.1.mrna1;Name=FBgn0260243.1;Parent=FBgn0260243.1.path1;Dir=sensecoverage=100.0;identity=99.2;matches=1634;mismatches=13;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	78456036	78456227	98	+	.	ID=FBgn0260243.1.mrna1.exon1;Name=FBgn0260243.1;Parent=FBgn0260243.1.mrna1;Target=FBgn0260243.1 1 192 +
Chr2	stalkie_big_nohaplotig	exon	78456287	78457109	99	+	.	ID=FBgn0260243.1.mrna1.exon2;Name=FBgn0260243.1;Parent=FBgn0260243.1.mrna1;Target=FBgn0260243.1 193 1015 +
Chr2	stalkie_big_nohaplotig	exon	78457199	78457279	100	+	.	ID=FBgn0260243.1.mrna1.exon3;Name=FBgn0260243.1;Parent=FBgn0260243.1.mrna1;Target=FBgn0260243.1 1016 1096 +
Chr2	stalkie_big_nohaplotig	exon	78457349	78457899	98	+	.	ID=FBgn0260243.1.mrna1.exon4;Name=FBgn0260243.1;Parent=FBgn0260243.1.mrna1;Target=FBgn0260243.1 1097 1647 +
Chr2	stalkie_big_nohaplotig	CDS	78456036	78456227	98	+	0	ID=FBgn0260243.1.mrna1.cds1;Name=FBgn0260243.1;Parent=FBgn0260243.1.mrna1;Target=FBgn0260243.1 1 192 +
Chr2	stalkie_big_nohaplotig	CDS	78456287	78457109	99	+	0	ID=FBgn0260243.1.mrna1.cds2;Name=FBgn0260243.1;Parent=FBgn0260243.1.mrna1;Target=FBgn0260243.1 193 1015 +
Chr2	stalkie_big_nohaplotig	CDS	78457199	78457279	100	+	1	ID=FBgn0260243.1.mrna1.cds3;Name=FBgn0260243.1;Parent=FBgn0260243.1.mrna1;Target=FBgn0260243.1 1016 1096 +
Chr2	stalkie_big_nohaplotig	CDS	78457349	78457899	98	+	1	ID=FBgn0260243.1.mrna1.cds4;Name=FBgn0260243.1;Parent=FBgn0260243.1.mrna1;Target=FBgn0260243.1 1097 1647 +
Chr2	stalkie_big_nohaplotig	mRNA	163617236	163617840	.	-	.	ID=FBgn0038427.1.mrna1;Name=FBgn0038427.1;Parent=FBgn0038427.1.path1;Dir=sensecoverage=14.0;identity=99.6;matches=458;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	163617629	163617840	100	-	.	ID=FBgn0038427.1.mrna1.exon1;Name=FBgn0038427.1;Parent=FBgn0038427.1.mrna1;Target=FBgn0038427.1 1 212 +
Chr2	stalkie_big_nohaplotig	exon	163617415	163617554	98	-	.	ID=FBgn0038427.1.mrna1.exon2;Name=FBgn0038427.1;Parent=FBgn0038427.1.mrna1;Target=FBgn0038427.1 213 352 +
Chr2	stalkie_big_nohaplotig	exon	163617236	163617343	100	-	.	ID=FBgn0038427.1.mrna1.exon3;Name=FBgn0038427.1;Parent=FBgn0038427.1.mrna1;Target=FBgn0038427.1 353 460 +
Chr2	stalkie_big_nohaplotig	mRNA	161982582	161983070	.	+	.	ID=FBgn0039283.mrna1;Name=FBgn0039283;Parent=FBgn0039283.path1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=488;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	161982582	161983070	99	+	.	ID=FBgn0039283.mrna1.exon1;Name=FBgn0039283;Parent=FBgn0039283.mrna1;Target=FBgn0039283 489 1 .
Chr2	stalkie_big_nohaplotig	CDS	161982582	161983070	99	+	0	ID=FBgn0039283.mrna1.cds1;Name=FBgn0039283;Parent=FBgn0039283.mrna1;Target=FBgn0039283 489 1 .
Chr1	stalkie_big_nohaplotig	mRNA	162685521	162686414	.	+	.	ID=FBgn0025381.1.mrna1;Name=FBgn0025381.1;Parent=FBgn0025381.1.path1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=889;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	162685521	162686414	99	+	.	ID=FBgn0025381.1.mrna1.exon1;Name=FBgn0025381.1;Parent=FBgn0025381.1.mrna1;Target=FBgn0025381.1 894 1 .
Chr1	stalkie_big_nohaplotig	CDS	162685521	162686414	99	+	0	ID=FBgn0025381.1.mrna1.cds1;Name=FBgn0025381.1;Parent=FBgn0025381.1.mrna1;Target=FBgn0025381.1 894 1 .
Chr1	stalkie_big_nohaplotig	mRNA	162642984	162644250	.	+	.	ID=FBgn0259923.1.mrna1;Name=FBgn0259923.1;Parent=FBgn0259923.1.path1;Dir=sensecoverage=91.8;identity=99.7;matches=1118;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	162642984	162643342	100	+	.	ID=FBgn0259923.1.mrna1.exon1;Name=FBgn0259923.1;Parent=FBgn0259923.1.mrna1;Target=FBgn0259923.1 101 459 +
Chr1	stalkie_big_nohaplotig	exon	162643426	162643526	99	+	.	ID=FBgn0259923.1.mrna1.exon2;Name=FBgn0259923.1;Parent=FBgn0259923.1.mrna1;Target=FBgn0259923.1 460 560 +
Chr1	stalkie_big_nohaplotig	exon	162643590	162644250	99	+	.	ID=FBgn0259923.1.mrna1.exon3;Name=FBgn0259923.1;Parent=FBgn0259923.1.mrna1;Target=FBgn0259923.1 561 1221 +
Chr1	stalkie_big_nohaplotig	CDS	162642986	162643342	100	+	0	ID=FBgn0259923.1.mrna1.cds1;Name=FBgn0259923.1;Parent=FBgn0259923.1.mrna1;Target=FBgn0259923.1 103 459 +
Chr1	stalkie_big_nohaplotig	CDS	162643426	162643526	99	+	0	ID=FBgn0259923.1.mrna1.cds2;Name=FBgn0259923.1;Parent=FBgn0259923.1.mrna1;Target=FBgn0259923.1 460 560 +
Chr1	stalkie_big_nohaplotig	CDS	162643590	162644250	99	+	2	ID=FBgn0259923.1.mrna1.cds3;Name=FBgn0259923.1;Parent=FBgn0259923.1.mrna1;Target=FBgn0259923.1 561 1221 +
Chr1	stalkie_big_nohaplotig	mRNA	17802795	17805899	.	-	.	ID=FBgn0035106.mrna1;Name=FBgn0035106;Parent=FBgn0035106.path1;Dir=sensecoverage=99.0;identity=99.8;matches=2125;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	17805529	17805899	100	-	.	ID=FBgn0035106.mrna1.exon1;Name=FBgn0035106;Parent=FBgn0035106.mrna1;Target=FBgn0035106 1 371 +
Chr1	stalkie_big_nohaplotig	exon	17805263	17805457	100	-	.	ID=FBgn0035106.mrna1.exon2;Name=FBgn0035106;Parent=FBgn0035106.mrna1;Target=FBgn0035106 372 566 +
Chr1	stalkie_big_nohaplotig	exon	17804978	17805194	100	-	.	ID=FBgn0035106.mrna1.exon3;Name=FBgn0035106;Parent=FBgn0035106.mrna1;Target=FBgn0035106 567 783 +
Chr1	stalkie_big_nohaplotig	exon	17804732	17804921	98	-	.	ID=FBgn0035106.mrna1.exon4;Name=FBgn0035106;Parent=FBgn0035106.mrna1;Target=FBgn0035106 784 973 +
Chr1	stalkie_big_nohaplotig	exon	17803533	17804080	99	-	.	ID=FBgn0035106.mrna1.exon5;Name=FBgn0035106;Parent=FBgn0035106.mrna1;Target=FBgn0035106 974 1521 +
Chr1	stalkie_big_nohaplotig	exon	17802795	17803403	100	-	.	ID=FBgn0035106.mrna1.exon6;Name=FBgn0035106;Parent=FBgn0035106.mrna1;Target=FBgn0035106 1522 2130 +
Chr1	stalkie_big_nohaplotig	CDS	17805529	17805899	100	-	0	ID=FBgn0035106.mrna1.cds1;Name=FBgn0035106;Parent=FBgn0035106.mrna1;Target=FBgn0035106 1 371 +
Chr1	stalkie_big_nohaplotig	CDS	17805263	17805457	100	-	2	ID=FBgn0035106.mrna1.cds2;Name=FBgn0035106;Parent=FBgn0035106.mrna1;Target=FBgn0035106 372 566 +
Chr1	stalkie_big_nohaplotig	CDS	17804978	17805194	100	-	2	ID=FBgn0035106.mrna1.cds3;Name=FBgn0035106;Parent=FBgn0035106.mrna1;Target=FBgn0035106 567 783 +
Chr1	stalkie_big_nohaplotig	CDS	17804732	17804921	98	-	0	ID=FBgn0035106.mrna1.cds4;Name=FBgn0035106;Parent=FBgn0035106.mrna1;Target=FBgn0035106 784 973 +
Chr1	stalkie_big_nohaplotig	CDS	17803533	17804080	99	-	1	ID=FBgn0035106.mrna1.cds5;Name=FBgn0035106;Parent=FBgn0035106.mrna1;Target=FBgn0035106 974 1521 +
Chr1	stalkie_big_nohaplotig	CDS	17802795	17803403	100	-	0	ID=FBgn0035106.mrna1.cds6;Name=FBgn0035106;Parent=FBgn0035106.mrna1;Target=FBgn0035106 1522 2130 +
Chr2	stalkie_big_nohaplotig	mRNA	81137190	81138536	.	+	.	ID=FBgn0038300.1.mrna1;Name=FBgn0038300.1;Parent=FBgn0038300.1.path1;Dir=sensecoverage=29.8;identity=99.6;matches=1282;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	81137190	81137977	99	+	.	ID=FBgn0038300.1.mrna1.exon1;Name=FBgn0038300.1;Parent=FBgn0038300.1.mrna1;Target=FBgn0038300.1 3 790 +
Chr2	stalkie_big_nohaplotig	exon	81138038	81138536	99	+	.	ID=FBgn0038300.1.mrna1.exon2;Name=FBgn0038300.1;Parent=FBgn0038300.1.mrna1;Target=FBgn0038300.1 791 1289 +
Chr1	stalkie_big_nohaplotig	mRNA	127536204	127590179	.	-	.	ID=FBgn0261873.1.mrna1;Name=FBgn0261873.1;Parent=FBgn0261873.1.path1;Dir=sensecoverage=98.8;identity=99.8;matches=2601;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	127590013	127590179	100	-	.	ID=FBgn0261873.1.mrna1.exon1;Name=FBgn0261873.1;Parent=FBgn0261873.1.mrna1;Target=FBgn0261873.1 33 199 +
Chr1	stalkie_big_nohaplotig	exon	127588746	127588837	100	-	.	ID=FBgn0261873.1.mrna1.exon2;Name=FBgn0261873.1;Parent=FBgn0261873.1.mrna1;Target=FBgn0261873.1 200 291 +
Chr1	stalkie_big_nohaplotig	exon	127574253	127574450	99	-	.	ID=FBgn0261873.1.mrna1.exon3;Name=FBgn0261873.1;Parent=FBgn0261873.1.mrna1;Target=FBgn0261873.1 292 489 +
Chr1	stalkie_big_nohaplotig	exon	127542035	127542242	100	-	.	ID=FBgn0261873.1.mrna1.exon4;Name=FBgn0261873.1;Parent=FBgn0261873.1.mrna1;Target=FBgn0261873.1 490 697 +
Chr1	stalkie_big_nohaplotig	exon	127540201	127541437	99	-	.	ID=FBgn0261873.1.mrna1.exon5;Name=FBgn0261873.1;Parent=FBgn0261873.1.mrna1;Target=FBgn0261873.1 698 1934 +
Chr1	stalkie_big_nohaplotig	exon	127539934	127540130	99	-	.	ID=FBgn0261873.1.mrna1.exon6;Name=FBgn0261873.1;Parent=FBgn0261873.1.mrna1;Target=FBgn0261873.1 1935 2131 +
Chr1	stalkie_big_nohaplotig	exon	127537443	127537574	100	-	.	ID=FBgn0261873.1.mrna1.exon7;Name=FBgn0261873.1;Parent=FBgn0261873.1.mrna1;Target=FBgn0261873.1 2132 2263 +
Chr1	stalkie_big_nohaplotig	exon	127537196	127537377	100	-	.	ID=FBgn0261873.1.mrna1.exon8;Name=FBgn0261873.1;Parent=FBgn0261873.1.mrna1;Target=FBgn0261873.1 2264 2445 +
Chr1	stalkie_big_nohaplotig	exon	127536204	127536395	100	-	.	ID=FBgn0261873.1.mrna1.exon9;Name=FBgn0261873.1;Parent=FBgn0261873.1.mrna1;Target=FBgn0261873.1 2446 2637 +
Chr1	stalkie_big_nohaplotig	CDS	127590013	127590178	100	-	0	ID=FBgn0261873.1.mrna1.cds1;Name=FBgn0261873.1;Parent=FBgn0261873.1.mrna1;Target=FBgn0261873.1 34 199 +
Chr1	stalkie_big_nohaplotig	CDS	127588746	127588837	100	-	1	ID=FBgn0261873.1.mrna1.cds2;Name=FBgn0261873.1;Parent=FBgn0261873.1.mrna1;Target=FBgn0261873.1 200 291 +
Chr1	stalkie_big_nohaplotig	CDS	127574253	127574450	99	-	0	ID=FBgn0261873.1.mrna1.cds3;Name=FBgn0261873.1;Parent=FBgn0261873.1.mrna1;Target=FBgn0261873.1 292 489 +
Chr1	stalkie_big_nohaplotig	CDS	127542035	127542242	100	-	0	ID=FBgn0261873.1.mrna1.cds4;Name=FBgn0261873.1;Parent=FBgn0261873.1.mrna1;Target=FBgn0261873.1 490 697 +
Chr1	stalkie_big_nohaplotig	CDS	127540201	127541437	99	-	1	ID=FBgn0261873.1.mrna1.cds5;Name=FBgn0261873.1;Parent=FBgn0261873.1.mrna1;Target=FBgn0261873.1 698 1934 +
Chr1	stalkie_big_nohaplotig	CDS	127539934	127540130	99	-	2	ID=FBgn0261873.1.mrna1.cds6;Name=FBgn0261873.1;Parent=FBgn0261873.1.mrna1;Target=FBgn0261873.1 1935 2131 +
Chr1	stalkie_big_nohaplotig	CDS	127537443	127537574	100	-	1	ID=FBgn0261873.1.mrna1.cds7;Name=FBgn0261873.1;Parent=FBgn0261873.1.mrna1;Target=FBgn0261873.1 2132 2263 +
Chr1	stalkie_big_nohaplotig	CDS	127537196	127537377	100	-	1	ID=FBgn0261873.1.mrna1.cds8;Name=FBgn0261873.1;Parent=FBgn0261873.1.mrna1;Target=FBgn0261873.1 2264 2445 +
Chr1	stalkie_big_nohaplotig	CDS	127536204	127536395	100	-	0	ID=FBgn0261873.1.mrna1.cds9;Name=FBgn0261873.1;Parent=FBgn0261873.1.mrna1;Target=FBgn0261873.1 2446 2637 +
Chr1	stalkie_big_nohaplotig	mRNA	127628592	127630011	.	-	.	ID=ORF742.mrna1;Name=ORF742;Parent=ORF742.path1;Dir=indeterminatecoverage=96.6;identity=98.1;matches=1393;mismatches=27;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	127628592	127630011	98	-	.	ID=ORF742.mrna1.exon1;Name=ORF742;Parent=ORF742.mrna1;Target=ORF742 1420 1 .
Chr1	stalkie_big_nohaplotig	CDS	127628593	127630011	98	-	0	ID=ORF742.mrna1.cds1;Name=ORF742;Parent=ORF742.mrna1;Target=ORF742 1419 1 .
ChrX	stalkie_big_nohaplotig	mRNA	55852554	55854000	.	-	.	ID=ORF882.mrna1;Name=ORF882;Parent=ORF882.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1360;mismatches=5;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	55853902	55854000	100	-	.	ID=ORF882.mrna1.exon1;Name=ORF882;Parent=ORF882.mrna1;Target=ORF882 1 99 +
ChrX	stalkie_big_nohaplotig	exon	55852554	55853819	99	-	.	ID=ORF882.mrna1.exon2;Name=ORF882;Parent=ORF882.mrna1;Target=ORF882 100 1365 +
ChrX	stalkie_big_nohaplotig	CDS	55853902	55854000	100	-	0	ID=ORF882.mrna1.cds1;Name=ORF882;Parent=ORF882.mrna1;Target=ORF882 1 99 +
ChrX	stalkie_big_nohaplotig	CDS	55852554	55853819	99	-	0	ID=ORF882.mrna1.cds2;Name=ORF882;Parent=ORF882.mrna1;Target=ORF882 100 1365 +
Chr2	stalkie_big_nohaplotig	mRNA	158855301	158901209	.	-	.	ID=FBgn0004606.1.mrna1;Name=FBgn0004606.1;Parent=FBgn0004606.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=3883;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	158901092	158901209	100	-	.	ID=FBgn0004606.1.mrna1.exon1;Name=FBgn0004606.1;Parent=FBgn0004606.1.mrna1;Target=FBgn0004606.1 1 118 +
Chr2	stalkie_big_nohaplotig	exon	158875498	158875667	100	-	.	ID=FBgn0004606.1.mrna1.exon2;Name=FBgn0004606.1;Parent=FBgn0004606.1.mrna1;Target=FBgn0004606.1 119 288 +
Chr2	stalkie_big_nohaplotig	exon	158874591	158875409	99	-	.	ID=FBgn0004606.1.mrna1.exon3;Name=FBgn0004606.1;Parent=FBgn0004606.1.mrna1;Target=FBgn0004606.1 289 1107 +
Chr2	stalkie_big_nohaplotig	exon	158855561	158858150	99	-	.	ID=FBgn0004606.1.mrna1.exon4;Name=FBgn0004606.1;Parent=FBgn0004606.1.mrna1;Target=FBgn0004606.1 1108 3697 +
Chr2	stalkie_big_nohaplotig	exon	158855301	158855491	100	-	.	ID=FBgn0004606.1.mrna1.exon5;Name=FBgn0004606.1;Parent=FBgn0004606.1.mrna1;Target=FBgn0004606.1 3698 3888 +
Chr2	stalkie_big_nohaplotig	CDS	158901092	158901209	100	-	0	ID=FBgn0004606.1.mrna1.cds1;Name=FBgn0004606.1;Parent=FBgn0004606.1.mrna1;Target=FBgn0004606.1 1 118 +
Chr2	stalkie_big_nohaplotig	CDS	158875498	158875667	100	-	1	ID=FBgn0004606.1.mrna1.cds2;Name=FBgn0004606.1;Parent=FBgn0004606.1.mrna1;Target=FBgn0004606.1 119 288 +
Chr2	stalkie_big_nohaplotig	CDS	158874591	158875409	99	-	0	ID=FBgn0004606.1.mrna1.cds3;Name=FBgn0004606.1;Parent=FBgn0004606.1.mrna1;Target=FBgn0004606.1 289 1107 +
Chr2	stalkie_big_nohaplotig	CDS	158855561	158858150	99	-	0	ID=FBgn0004606.1.mrna1.cds4;Name=FBgn0004606.1;Parent=FBgn0004606.1.mrna1;Target=FBgn0004606.1 1108 3697 +
Chr2	stalkie_big_nohaplotig	CDS	158855301	158855491	100	-	1	ID=FBgn0004606.1.mrna1.cds5;Name=FBgn0004606.1;Parent=FBgn0004606.1.mrna1;Target=FBgn0004606.1 3698 3888 +
Chr2	stalkie_big_nohaplotig	mRNA	40043114	40044466	.	+	.	ID=FBgn0015838.1.mrna1;Name=FBgn0015838.1;Parent=FBgn0015838.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1283;mismatches=0;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	40043114	40043418	99	+	.	ID=FBgn0015838.1.mrna1.exon1;Name=FBgn0015838.1;Parent=FBgn0015838.1.mrna1;Target=FBgn0015838.1 1 306 +
Chr2	stalkie_big_nohaplotig	exon	40043489	40044466	100	+	.	ID=FBgn0015838.1.mrna1.exon2;Name=FBgn0015838.1;Parent=FBgn0015838.1.mrna1;Target=FBgn0015838.1 307 1284 +
Chr2	stalkie_big_nohaplotig	CDS	40043116	40043186	98	+	0	ID=FBgn0015838.1.mrna1.cds1;Name=FBgn0015838.1;Parent=FBgn0015838.1.mrna1;Target=FBgn0015838.1 3 74 +
Chr2	stalkie_big_nohaplotig	mRNA	40016414	40037165	.	-	.	ID=FBgn0003612.1.mrna1;Name=FBgn0003612.1;Parent=FBgn0003612.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1923;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	40036938	40037165	100	-	.	ID=FBgn0003612.1.mrna1.exon1;Name=FBgn0003612.1;Parent=FBgn0003612.1.mrna1;Target=FBgn0003612.1 1 228 +
Chr2	stalkie_big_nohaplotig	exon	40027610	40027785	100	-	.	ID=FBgn0003612.1.mrna1.exon2;Name=FBgn0003612.1;Parent=FBgn0003612.1.mrna1;Target=FBgn0003612.1 229 404 +
Chr2	stalkie_big_nohaplotig	exon	40027024	40027540	100	-	.	ID=FBgn0003612.1.mrna1.exon3;Name=FBgn0003612.1;Parent=FBgn0003612.1.mrna1;Target=FBgn0003612.1 405 921 +
Chr2	stalkie_big_nohaplotig	exon	40026728	40026968	100	-	.	ID=FBgn0003612.1.mrna1.exon4;Name=FBgn0003612.1;Parent=FBgn0003612.1.mrna1;Target=FBgn0003612.1 922 1162 +
Chr2	stalkie_big_nohaplotig	exon	40026408	40026642	100	-	.	ID=FBgn0003612.1.mrna1.exon5;Name=FBgn0003612.1;Parent=FBgn0003612.1.mrna1;Target=FBgn0003612.1 1163 1397 +
Chr2	stalkie_big_nohaplotig	exon	40026175	40026341	100	-	.	ID=FBgn0003612.1.mrna1.exon6;Name=FBgn0003612.1;Parent=FBgn0003612.1.mrna1;Target=FBgn0003612.1 1398 1564 +
Chr2	stalkie_big_nohaplotig	exon	40026014	40026108	100	-	.	ID=FBgn0003612.1.mrna1.exon7;Name=FBgn0003612.1;Parent=FBgn0003612.1.mrna1;Target=FBgn0003612.1 1565 1659 +
Chr2	stalkie_big_nohaplotig	exon	40025800	40025950	100	-	.	ID=FBgn0003612.1.mrna1.exon8;Name=FBgn0003612.1;Parent=FBgn0003612.1.mrna1;Target=FBgn0003612.1 1660 1810 +
Chr2	stalkie_big_nohaplotig	exon	40016545	40016595	100	-	.	ID=FBgn0003612.1.mrna1.exon9;Name=FBgn0003612.1;Parent=FBgn0003612.1.mrna1;Target=FBgn0003612.1 1811 1861 +
Chr2	stalkie_big_nohaplotig	exon	40016414	40016475	100	-	.	ID=FBgn0003612.1.mrna1.exon10;Name=FBgn0003612.1;Parent=FBgn0003612.1.mrna1;Target=FBgn0003612.1 1862 1923 +
Chr2	stalkie_big_nohaplotig	CDS	40036938	40037165	100	-	0	ID=FBgn0003612.1.mrna1.cds1;Name=FBgn0003612.1;Parent=FBgn0003612.1.mrna1;Target=FBgn0003612.1 1 228 +
Chr2	stalkie_big_nohaplotig	CDS	40027610	40027785	100	-	0	ID=FBgn0003612.1.mrna1.cds2;Name=FBgn0003612.1;Parent=FBgn0003612.1.mrna1;Target=FBgn0003612.1 229 404 +
Chr2	stalkie_big_nohaplotig	CDS	40027024	40027540	100	-	2	ID=FBgn0003612.1.mrna1.cds3;Name=FBgn0003612.1;Parent=FBgn0003612.1.mrna1;Target=FBgn0003612.1 405 921 +
Chr2	stalkie_big_nohaplotig	CDS	40026728	40026968	100	-	0	ID=FBgn0003612.1.mrna1.cds4;Name=FBgn0003612.1;Parent=FBgn0003612.1.mrna1;Target=FBgn0003612.1 922 1162 +
Chr2	stalkie_big_nohaplotig	CDS	40026408	40026642	100	-	1	ID=FBgn0003612.1.mrna1.cds5;Name=FBgn0003612.1;Parent=FBgn0003612.1.mrna1;Target=FBgn0003612.1 1163 1397 +
Chr2	stalkie_big_nohaplotig	CDS	40026175	40026341	100	-	2	ID=FBgn0003612.1.mrna1.cds6;Name=FBgn0003612.1;Parent=FBgn0003612.1.mrna1;Target=FBgn0003612.1 1398 1564 +
Chr2	stalkie_big_nohaplotig	CDS	40026014	40026108	100	-	1	ID=FBgn0003612.1.mrna1.cds7;Name=FBgn0003612.1;Parent=FBgn0003612.1.mrna1;Target=FBgn0003612.1 1565 1659 +
Chr2	stalkie_big_nohaplotig	CDS	40025800	40025950	100	-	0	ID=FBgn0003612.1.mrna1.cds8;Name=FBgn0003612.1;Parent=FBgn0003612.1.mrna1;Target=FBgn0003612.1 1660 1810 +
Chr2	stalkie_big_nohaplotig	CDS	40016545	40016595	100	-	1	ID=FBgn0003612.1.mrna1.cds9;Name=FBgn0003612.1;Parent=FBgn0003612.1.mrna1;Target=FBgn0003612.1 1811 1861 +
Chr2	stalkie_big_nohaplotig	CDS	40016414	40016475	100	-	1	ID=FBgn0003612.1.mrna1.cds10;Name=FBgn0003612.1;Parent=FBgn0003612.1.mrna1;Target=FBgn0003612.1 1862 1923 +
Chr2	stalkie_big_nohaplotig	mRNA	39969517	39995056	.	+	.	ID=FBgn0027561.1.mrna1;Name=FBgn0027561.1;Parent=FBgn0027561.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3027;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	39969517	39969572	100	+	.	ID=FBgn0027561.1.mrna1.exon1;Name=FBgn0027561.1;Parent=FBgn0027561.1.mrna1;Target=FBgn0027561.1 1 56 +
Chr2	stalkie_big_nohaplotig	exon	39969715	39969897	100	+	.	ID=FBgn0027561.1.mrna1.exon2;Name=FBgn0027561.1;Parent=FBgn0027561.1.mrna1;Target=FBgn0027561.1 57 239 +
Chr2	stalkie_big_nohaplotig	exon	39984472	39984742	100	+	.	ID=FBgn0027561.1.mrna1.exon3;Name=FBgn0027561.1;Parent=FBgn0027561.1.mrna1;Target=FBgn0027561.1 240 510 +
Chr2	stalkie_big_nohaplotig	exon	39984832	39984885	100	+	.	ID=FBgn0027561.1.mrna1.exon4;Name=FBgn0027561.1;Parent=FBgn0027561.1.mrna1;Target=FBgn0027561.1 511 564 +
Chr2	stalkie_big_nohaplotig	exon	39984948	39985208	100	+	.	ID=FBgn0027561.1.mrna1.exon5;Name=FBgn0027561.1;Parent=FBgn0027561.1.mrna1;Target=FBgn0027561.1 565 825 +
Chr2	stalkie_big_nohaplotig	exon	39985284	39985745	100	+	.	ID=FBgn0027561.1.mrna1.exon6;Name=FBgn0027561.1;Parent=FBgn0027561.1.mrna1;Target=FBgn0027561.1 826 1287 +
Chr2	stalkie_big_nohaplotig	exon	39990151	39990183	100	+	.	ID=FBgn0027561.1.mrna1.exon7;Name=FBgn0027561.1;Parent=FBgn0027561.1.mrna1;Target=FBgn0027561.1 1288 1320 +
Chr2	stalkie_big_nohaplotig	exon	39990323	39990838	100	+	.	ID=FBgn0027561.1.mrna1.exon8;Name=FBgn0027561.1;Parent=FBgn0027561.1.mrna1;Target=FBgn0027561.1 1321 1836 +
Chr2	stalkie_big_nohaplotig	exon	39991110	39991796	100	+	.	ID=FBgn0027561.1.mrna1.exon9;Name=FBgn0027561.1;Parent=FBgn0027561.1.mrna1;Target=FBgn0027561.1 1837 2523 +
Chr2	stalkie_big_nohaplotig	exon	39994553	39995056	100	+	.	ID=FBgn0027561.1.mrna1.exon10;Name=FBgn0027561.1;Parent=FBgn0027561.1.mrna1;Target=FBgn0027561.1 2524 3027 +
Chr2	stalkie_big_nohaplotig	CDS	39969517	39969572	100	+	0	ID=FBgn0027561.1.mrna1.cds1;Name=FBgn0027561.1;Parent=FBgn0027561.1.mrna1;Target=FBgn0027561.1 1 56 +
Chr2	stalkie_big_nohaplotig	CDS	39969715	39969897	100	+	2	ID=FBgn0027561.1.mrna1.cds2;Name=FBgn0027561.1;Parent=FBgn0027561.1.mrna1;Target=FBgn0027561.1 57 239 +
Chr2	stalkie_big_nohaplotig	CDS	39984472	39984742	100	+	2	ID=FBgn0027561.1.mrna1.cds3;Name=FBgn0027561.1;Parent=FBgn0027561.1.mrna1;Target=FBgn0027561.1 240 510 +
Chr2	stalkie_big_nohaplotig	CDS	39984832	39984885	100	+	0	ID=FBgn0027561.1.mrna1.cds4;Name=FBgn0027561.1;Parent=FBgn0027561.1.mrna1;Target=FBgn0027561.1 511 564 +
Chr2	stalkie_big_nohaplotig	CDS	39984948	39985208	100	+	0	ID=FBgn0027561.1.mrna1.cds5;Name=FBgn0027561.1;Parent=FBgn0027561.1.mrna1;Target=FBgn0027561.1 565 825 +
Chr2	stalkie_big_nohaplotig	CDS	39985284	39985745	100	+	0	ID=FBgn0027561.1.mrna1.cds6;Name=FBgn0027561.1;Parent=FBgn0027561.1.mrna1;Target=FBgn0027561.1 826 1287 +
Chr2	stalkie_big_nohaplotig	CDS	39990151	39990183	100	+	0	ID=FBgn0027561.1.mrna1.cds7;Name=FBgn0027561.1;Parent=FBgn0027561.1.mrna1;Target=FBgn0027561.1 1288 1320 +
Chr2	stalkie_big_nohaplotig	CDS	39990323	39990838	100	+	0	ID=FBgn0027561.1.mrna1.cds8;Name=FBgn0027561.1;Parent=FBgn0027561.1.mrna1;Target=FBgn0027561.1 1321 1836 +
Chr2	stalkie_big_nohaplotig	CDS	39991110	39991796	100	+	0	ID=FBgn0027561.1.mrna1.cds9;Name=FBgn0027561.1;Parent=FBgn0027561.1.mrna1;Target=FBgn0027561.1 1837 2523 +
Chr2	stalkie_big_nohaplotig	CDS	39994553	39995056	100	+	0	ID=FBgn0027561.1.mrna1.cds10;Name=FBgn0027561.1;Parent=FBgn0027561.1.mrna1;Target=FBgn0027561.1 2524 3027 +
Chr2	stalkie_big_nohaplotig	mRNA	69479582	69488087	.	-	.	ID=FBgn0025741.1.mrna1;Name=FBgn0025741.1;Parent=FBgn0025741.1.path1;Dir=sensecoverage=99.5;identity=100.0;matches=5930;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	69486766	69488087	100	-	.	ID=FBgn0025741.1.mrna1.exon1;Name=FBgn0025741.1;Parent=FBgn0025741.1.mrna1;Target=FBgn0025741.1 29 1350 +
Chr2	stalkie_big_nohaplotig	exon	69485467	69486712	100	-	.	ID=FBgn0025741.1.mrna1.exon2;Name=FBgn0025741.1;Parent=FBgn0025741.1.mrna1;Target=FBgn0025741.1 1351 2596 +
Chr2	stalkie_big_nohaplotig	exon	69481035	69483371	100	-	.	ID=FBgn0025741.1.mrna1.exon3;Name=FBgn0025741.1;Parent=FBgn0025741.1.mrna1;Target=FBgn0025741.1 2597 4933 +
Chr2	stalkie_big_nohaplotig	exon	69480647	69480842	100	-	.	ID=FBgn0025741.1.mrna1.exon4;Name=FBgn0025741.1;Parent=FBgn0025741.1.mrna1;Target=FBgn0025741.1 4934 5129 +
Chr2	stalkie_big_nohaplotig	exon	69480194	69480580	100	-	.	ID=FBgn0025741.1.mrna1.exon5;Name=FBgn0025741.1;Parent=FBgn0025741.1.mrna1;Target=FBgn0025741.1 5130 5516 +
Chr2	stalkie_big_nohaplotig	exon	69480002	69480132	100	-	.	ID=FBgn0025741.1.mrna1.exon6;Name=FBgn0025741.1;Parent=FBgn0025741.1.mrna1;Target=FBgn0025741.1 5517 5647 +
Chr2	stalkie_big_nohaplotig	exon	69479799	69479944	100	-	.	ID=FBgn0025741.1.mrna1.exon7;Name=FBgn0025741.1;Parent=FBgn0025741.1.mrna1;Target=FBgn0025741.1 5648 5793 +
Chr2	stalkie_big_nohaplotig	exon	69479582	69479746	100	-	.	ID=FBgn0025741.1.mrna1.exon8;Name=FBgn0025741.1;Parent=FBgn0025741.1.mrna1;Target=FBgn0025741.1 5794 5958 +
Chr2	stalkie_big_nohaplotig	CDS	69486766	69488085	100	-	0	ID=FBgn0025741.1.mrna1.cds1;Name=FBgn0025741.1;Parent=FBgn0025741.1.mrna1;Target=FBgn0025741.1 31 1350 +
Chr2	stalkie_big_nohaplotig	CDS	69485467	69486712	100	-	0	ID=FBgn0025741.1.mrna1.cds2;Name=FBgn0025741.1;Parent=FBgn0025741.1.mrna1;Target=FBgn0025741.1 1351 2596 +
Chr2	stalkie_big_nohaplotig	CDS	69481035	69483371	100	-	1	ID=FBgn0025741.1.mrna1.cds3;Name=FBgn0025741.1;Parent=FBgn0025741.1.mrna1;Target=FBgn0025741.1 2597 4933 +
Chr2	stalkie_big_nohaplotig	CDS	69480647	69480842	100	-	1	ID=FBgn0025741.1.mrna1.cds4;Name=FBgn0025741.1;Parent=FBgn0025741.1.mrna1;Target=FBgn0025741.1 4934 5129 +
Chr2	stalkie_big_nohaplotig	CDS	69480194	69480580	100	-	2	ID=FBgn0025741.1.mrna1.cds5;Name=FBgn0025741.1;Parent=FBgn0025741.1.mrna1;Target=FBgn0025741.1 5130 5516 +
Chr2	stalkie_big_nohaplotig	CDS	69480002	69480132	100	-	2	ID=FBgn0025741.1.mrna1.cds6;Name=FBgn0025741.1;Parent=FBgn0025741.1.mrna1;Target=FBgn0025741.1 5517 5647 +
Chr2	stalkie_big_nohaplotig	CDS	69479799	69479944	100	-	1	ID=FBgn0025741.1.mrna1.cds7;Name=FBgn0025741.1;Parent=FBgn0025741.1.mrna1;Target=FBgn0025741.1 5648 5793 +
Chr2	stalkie_big_nohaplotig	CDS	69479582	69479746	100	-	0	ID=FBgn0025741.1.mrna1.cds8;Name=FBgn0025741.1;Parent=FBgn0025741.1.mrna1;Target=FBgn0025741.1 5794 5958 +
Chr2	stalkie_big_nohaplotig	mRNA	23903799	23904500	.	-	.	ID=FBgn0043471.2.mrna1;Name=FBgn0043471.2;Parent=FBgn0043471.2.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=702;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	23903799	23904500	100	-	.	ID=FBgn0043471.2.mrna1.exon1;Name=FBgn0043471.2;Parent=FBgn0043471.2.mrna1;Target=FBgn0043471.2 702 1 .
Chr2	stalkie_big_nohaplotig	CDS	23903799	23904500	100	-	0	ID=FBgn0043471.2.mrna1.cds1;Name=FBgn0043471.2;Parent=FBgn0043471.2.mrna1;Target=FBgn0043471.2 702 1 .
Chr2	stalkie_big_nohaplotig	mRNA	1498478	1500849	.	+	.	ID=FBgn0005636.1.mrna1;Name=FBgn0005636.1;Parent=FBgn0005636.1.path1;Dir=sensecoverage=93.1;identity=99.8;matches=1793;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	1498478	1499064	99	+	.	ID=FBgn0005636.1.mrna1.exon1;Name=FBgn0005636.1;Parent=FBgn0005636.1.mrna1;Target=FBgn0005636.1 134 720 +
Chr2	stalkie_big_nohaplotig	exon	1499130	1499504	100	+	.	ID=FBgn0005636.1.mrna1.exon2;Name=FBgn0005636.1;Parent=FBgn0005636.1.mrna1;Target=FBgn0005636.1 721 1095 +
Chr2	stalkie_big_nohaplotig	exon	1499750	1500094	100	+	.	ID=FBgn0005636.1.mrna1.exon3;Name=FBgn0005636.1;Parent=FBgn0005636.1.mrna1;Target=FBgn0005636.1 1096 1440 +
Chr2	stalkie_big_nohaplotig	exon	1500160	1500339	100	+	.	ID=FBgn0005636.1.mrna1.exon4;Name=FBgn0005636.1;Parent=FBgn0005636.1.mrna1;Target=FBgn0005636.1 1441 1620 +
Chr2	stalkie_big_nohaplotig	exon	1500398	1500505	100	+	.	ID=FBgn0005636.1.mrna1.exon5;Name=FBgn0005636.1;Parent=FBgn0005636.1.mrna1;Target=FBgn0005636.1 1621 1728 +
Chr2	stalkie_big_nohaplotig	exon	1500649	1500849	99	+	.	ID=FBgn0005636.1.mrna1.exon6;Name=FBgn0005636.1;Parent=FBgn0005636.1.mrna1;Target=FBgn0005636.1 1729 1929 +
Chr2	stalkie_big_nohaplotig	CDS	1498480	1499064	99	+	0	ID=FBgn0005636.1.mrna1.cds1;Name=FBgn0005636.1;Parent=FBgn0005636.1.mrna1;Target=FBgn0005636.1 136 720 +
Chr2	stalkie_big_nohaplotig	CDS	1499130	1499504	100	+	0	ID=FBgn0005636.1.mrna1.cds2;Name=FBgn0005636.1;Parent=FBgn0005636.1.mrna1;Target=FBgn0005636.1 721 1095 +
Chr2	stalkie_big_nohaplotig	CDS	1499750	1500094	100	+	0	ID=FBgn0005636.1.mrna1.cds3;Name=FBgn0005636.1;Parent=FBgn0005636.1.mrna1;Target=FBgn0005636.1 1096 1440 +
Chr2	stalkie_big_nohaplotig	CDS	1500160	1500339	100	+	0	ID=FBgn0005636.1.mrna1.cds4;Name=FBgn0005636.1;Parent=FBgn0005636.1.mrna1;Target=FBgn0005636.1 1441 1620 +
Chr2	stalkie_big_nohaplotig	CDS	1500398	1500505	100	+	0	ID=FBgn0005636.1.mrna1.cds5;Name=FBgn0005636.1;Parent=FBgn0005636.1.mrna1;Target=FBgn0005636.1 1621 1728 +
Chr2	stalkie_big_nohaplotig	CDS	1500649	1500849	99	+	0	ID=FBgn0005636.1.mrna1.cds6;Name=FBgn0005636.1;Parent=FBgn0005636.1.mrna1;Target=FBgn0005636.1 1729 1929 +
Chr2	stalkie_big_nohaplotig	mRNA	1660683	1661598	.	-	.	ID=FBgn0005638.1.mrna1;Name=FBgn0005638.1;Parent=FBgn0005638.1.path1;Dir=indeterminatecoverage=90.9;identity=100.0;matches=916;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	1660683	1661598	100	-	.	ID=FBgn0005638.1.mrna1.exon1;Name=FBgn0005638.1;Parent=FBgn0005638.1.mrna1;Target=FBgn0005638.1 916 1 .
Chr2	stalkie_big_nohaplotig	CDS	1660683	1661598	100	-	0	ID=FBgn0005638.1.mrna1.cds1;Name=FBgn0005638.1;Parent=FBgn0005638.1.mrna1;Target=FBgn0005638.1 916 1 .
Chr2	stalkie_big_nohaplotig	mRNA	1310283	1315496	.	-	.	ID=FBgn0034240.1.mrna1;Name=FBgn0034240.1;Parent=FBgn0034240.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=5014;mismatches=18;indels=2;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	1314019	1315496	99	-	.	ID=FBgn0034240.1.mrna1.exon1;Name=FBgn0034240.1;Parent=FBgn0034240.1.mrna1;Target=FBgn0034240.1 1 1479 +
Chr2	stalkie_big_nohaplotig	exon	1313059	1313954	99	-	.	ID=FBgn0034240.1.mrna1.exon2;Name=FBgn0034240.1;Parent=FBgn0034240.1.mrna1;Target=FBgn0034240.1 1480 2375 +
Chr2	stalkie_big_nohaplotig	exon	1312082	1312996	99	-	.	ID=FBgn0034240.1.mrna1.exon3;Name=FBgn0034240.1;Parent=FBgn0034240.1.mrna1;Target=FBgn0034240.1 2376 3290 +
Chr2	stalkie_big_nohaplotig	exon	1310283	1312025	99	-	.	ID=FBgn0034240.1.mrna1.exon4;Name=FBgn0034240.1;Parent=FBgn0034240.1.mrna1;Target=FBgn0034240.1 3291 5034 +
Chr2	stalkie_big_nohaplotig	CDS	1315460	1315494	97	-	0	ID=FBgn0034240.1.mrna1.cds1;Name=FBgn0034240.1;Parent=FBgn0034240.1.mrna1;Target=FBgn0034240.1 3 38 +
Chr1	stalkie_big_nohaplotig	mRNA	83734227	83737503	.	-	.	ID=FBgn0025621.1.mrna1;Name=FBgn0025621.1;Parent=FBgn0025621.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=3149;mismatches=16;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	83737290	83737503	100	-	.	ID=FBgn0025621.1.mrna1.exon1;Name=FBgn0025621.1;Parent=FBgn0025621.1.mrna1;Target=FBgn0025621.1 1 214 +
Chr1	stalkie_big_nohaplotig	exon	83736467	83737237	100	-	.	ID=FBgn0025621.1.mrna1.exon2;Name=FBgn0025621.1;Parent=FBgn0025621.1.mrna1;Target=FBgn0025621.1 215 985 +
Chr1	stalkie_big_nohaplotig	exon	83734227	83736406	99	-	.	ID=FBgn0025621.1.mrna1.exon3;Name=FBgn0025621.1;Parent=FBgn0025621.1.mrna1;Target=FBgn0025621.1 986 3165 +
Chr1	stalkie_big_nohaplotig	CDS	83737290	83737503	100	-	0	ID=FBgn0025621.1.mrna1.cds1;Name=FBgn0025621.1;Parent=FBgn0025621.1.mrna1;Target=FBgn0025621.1 1 214 +
Chr1	stalkie_big_nohaplotig	CDS	83736467	83737237	100	-	1	ID=FBgn0025621.1.mrna1.cds2;Name=FBgn0025621.1;Parent=FBgn0025621.1.mrna1;Target=FBgn0025621.1 215 985 +
Chr1	stalkie_big_nohaplotig	CDS	83734227	83736406	99	-	1	ID=FBgn0025621.1.mrna1.cds3;Name=FBgn0025621.1;Parent=FBgn0025621.1.mrna1;Target=FBgn0025621.1 986 3165 +
Chr1	stalkie_big_nohaplotig	mRNA	65920646	65926145	.	+	.	ID=FBgn0036628.1.mrna1;Name=FBgn0036628.1;Parent=FBgn0036628.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1702;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	65920646	65920758	99	+	.	ID=FBgn0036628.1.mrna1.exon1;Name=FBgn0036628.1;Parent=FBgn0036628.1.mrna1;Target=FBgn0036628.1 1 113 +
Chr1	stalkie_big_nohaplotig	exon	65920852	65921044	100	+	.	ID=FBgn0036628.1.mrna1.exon2;Name=FBgn0036628.1;Parent=FBgn0036628.1.mrna1;Target=FBgn0036628.1 114 306 +
Chr1	stalkie_big_nohaplotig	exon	65924630	65925691	100	+	.	ID=FBgn0036628.1.mrna1.exon3;Name=FBgn0036628.1;Parent=FBgn0036628.1.mrna1;Target=FBgn0036628.1 307 1368 +
Chr1	stalkie_big_nohaplotig	exon	65925747	65925887	100	+	.	ID=FBgn0036628.1.mrna1.exon4;Name=FBgn0036628.1;Parent=FBgn0036628.1.mrna1;Target=FBgn0036628.1 1369 1509 +
Chr1	stalkie_big_nohaplotig	exon	65925951	65926145	99	+	.	ID=FBgn0036628.1.mrna1.exon5;Name=FBgn0036628.1;Parent=FBgn0036628.1.mrna1;Target=FBgn0036628.1 1510 1704 +
Chr1	stalkie_big_nohaplotig	CDS	65920646	65920758	99	+	0	ID=FBgn0036628.1.mrna1.cds1;Name=FBgn0036628.1;Parent=FBgn0036628.1.mrna1;Target=FBgn0036628.1 1 113 +
Chr1	stalkie_big_nohaplotig	CDS	65920852	65921044	100	+	2	ID=FBgn0036628.1.mrna1.cds2;Name=FBgn0036628.1;Parent=FBgn0036628.1.mrna1;Target=FBgn0036628.1 114 306 +
Chr1	stalkie_big_nohaplotig	CDS	65924630	65925691	100	+	0	ID=FBgn0036628.1.mrna1.cds3;Name=FBgn0036628.1;Parent=FBgn0036628.1.mrna1;Target=FBgn0036628.1 307 1368 +
Chr1	stalkie_big_nohaplotig	CDS	65925747	65925887	100	+	0	ID=FBgn0036628.1.mrna1.cds4;Name=FBgn0036628.1;Parent=FBgn0036628.1.mrna1;Target=FBgn0036628.1 1369 1509 +
Chr1	stalkie_big_nohaplotig	CDS	65925951	65926145	99	+	0	ID=FBgn0036628.1.mrna1.cds5;Name=FBgn0036628.1;Parent=FBgn0036628.1.mrna1;Target=FBgn0036628.1 1510 1704 +
Chr1	stalkie_big_nohaplotig	mRNA	65932301	65934470	.	-	.	ID=FBgn0037051.1.mrna1;Name=FBgn0037051.1;Parent=FBgn0037051.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1250;mismatches=0;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	65934202	65934470	100	-	.	ID=FBgn0037051.1.mrna1.exon1;Name=FBgn0037051.1;Parent=FBgn0037051.1.mrna1;Target=FBgn0037051.1 1 269 +
Chr1	stalkie_big_nohaplotig	exon	65934001	65934146	100	-	.	ID=FBgn0037051.1.mrna1.exon2;Name=FBgn0037051.1;Parent=FBgn0037051.1.mrna1;Target=FBgn0037051.1 270 415 +
Chr1	stalkie_big_nohaplotig	exon	65933438	65933946	100	-	.	ID=FBgn0037051.1.mrna1.exon3;Name=FBgn0037051.1;Parent=FBgn0037051.1.mrna1;Target=FBgn0037051.1 416 924 +
Chr1	stalkie_big_nohaplotig	exon	65932301	65932626	99	-	.	ID=FBgn0037051.1.mrna1.exon4;Name=FBgn0037051.1;Parent=FBgn0037051.1.mrna1;Target=FBgn0037051.1 925 1251 +
Chr1	stalkie_big_nohaplotig	CDS	65934202	65934470	100	-	0	ID=FBgn0037051.1.mrna1.cds1;Name=FBgn0037051.1;Parent=FBgn0037051.1.mrna1;Target=FBgn0037051.1 1 269 +
Chr1	stalkie_big_nohaplotig	CDS	65934001	65934146	100	-	2	ID=FBgn0037051.1.mrna1.cds2;Name=FBgn0037051.1;Parent=FBgn0037051.1.mrna1;Target=FBgn0037051.1 270 415 +
Chr1	stalkie_big_nohaplotig	CDS	65933438	65933946	100	-	1	ID=FBgn0037051.1.mrna1.cds3;Name=FBgn0037051.1;Parent=FBgn0037051.1.mrna1;Target=FBgn0037051.1 416 924 +
Chr1	stalkie_big_nohaplotig	CDS	65932301	65932626	99	-	0	ID=FBgn0037051.1.mrna1.cds4;Name=FBgn0037051.1;Parent=FBgn0037051.1.mrna1;Target=FBgn0037051.1 925 1251 +
Chr1	stalkie_big_nohaplotig	mRNA	159767736	159770317	.	-	.	ID=FBgn0053178.2.mrna1;Name=FBgn0053178.2;Parent=FBgn0053178.2.path1;Dir=sensecoverage=100.0;identity=99.4;matches=532;mismatches=2;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	159769999	159770317	99	-	.	ID=FBgn0053178.2.mrna1.exon1;Name=FBgn0053178.2;Parent=FBgn0053178.2.mrna1;Target=FBgn0053178.2 1 318 +
Chr1	stalkie_big_nohaplotig	exon	159767993	159768072	100	-	.	ID=FBgn0053178.2.mrna1.exon2;Name=FBgn0053178.2;Parent=FBgn0053178.2.mrna1;Target=FBgn0053178.2 319 398 +
Chr1	stalkie_big_nohaplotig	exon	159767736	159767871	99	-	.	ID=FBgn0053178.2.mrna1.exon3;Name=FBgn0053178.2;Parent=FBgn0053178.2.mrna1;Target=FBgn0053178.2 399 534 +
Chr1	stalkie_big_nohaplotig	CDS	159769999	159770196	99	-	0	ID=FBgn0053178.2.mrna1.cds1;Name=FBgn0053178.2;Parent=FBgn0053178.2.mrna1;Target=FBgn0053178.2 121 318 +
Chr1	stalkie_big_nohaplotig	CDS	159767993	159768072	100	-	0	ID=FBgn0053178.2.mrna1.cds2;Name=FBgn0053178.2;Parent=FBgn0053178.2.mrna1;Target=FBgn0053178.2 319 398 +
Chr1	stalkie_big_nohaplotig	CDS	159767736	159767871	99	-	2	ID=FBgn0053178.2.mrna1.cds3;Name=FBgn0053178.2;Parent=FBgn0053178.2.mrna1;Target=FBgn0053178.2 399 534 +
Chr1	stalkie_big_nohaplotig	mRNA	159905088	159906194	.	-	.	ID=ORF1433.mrna1;Name=ORF1433;Parent=ORF1433.path1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1094;mismatches=13;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	159905088	159906194	98	-	.	ID=ORF1433.mrna1.exon1;Name=ORF1433;Parent=ORF1433.mrna1;Target=ORF1433 1107 1 .
Chr1	stalkie_big_nohaplotig	CDS	159905088	159906194	98	-	0	ID=ORF1433.mrna1.cds1;Name=ORF1433;Parent=ORF1433.mrna1;Target=ORF1433 1107 1 .
Chr2	stalkie_big_nohaplotig	mRNA	157601309	157602408	.	-	.	ID=FBgn0027610.1.mrna1;Name=FBgn0027610.1;Parent=FBgn0027610.1.path1;Dir=sensecoverage=99.5;identity=100.0;matches=854;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	157602157	157602408	100	-	.	ID=FBgn0027610.1.mrna1.exon1;Name=FBgn0027610.1;Parent=FBgn0027610.1.mrna1;Target=FBgn0027610.1 5 256 +
Chr2	stalkie_big_nohaplotig	exon	157602002	157602097	100	-	.	ID=FBgn0027610.1.mrna1.exon2;Name=FBgn0027610.1;Parent=FBgn0027610.1.mrna1;Target=FBgn0027610.1 257 352 +
Chr2	stalkie_big_nohaplotig	exon	157601879	157601948	100	-	.	ID=FBgn0027610.1.mrna1.exon3;Name=FBgn0027610.1;Parent=FBgn0027610.1.mrna1;Target=FBgn0027610.1 353 422 +
Chr2	stalkie_big_nohaplotig	exon	157601689	157601821	100	-	.	ID=FBgn0027610.1.mrna1.exon4;Name=FBgn0027610.1;Parent=FBgn0027610.1.mrna1;Target=FBgn0027610.1 423 555 +
Chr2	stalkie_big_nohaplotig	exon	157601309	157601611	100	-	.	ID=FBgn0027610.1.mrna1.exon5;Name=FBgn0027610.1;Parent=FBgn0027610.1.mrna1;Target=FBgn0027610.1 556 858 +
Chr2	stalkie_big_nohaplotig	CDS	157602157	157602406	100	-	0	ID=FBgn0027610.1.mrna1.cds1;Name=FBgn0027610.1;Parent=FBgn0027610.1.mrna1;Target=FBgn0027610.1 7 256 +
Chr2	stalkie_big_nohaplotig	CDS	157602002	157602097	100	-	1	ID=FBgn0027610.1.mrna1.cds2;Name=FBgn0027610.1;Parent=FBgn0027610.1.mrna1;Target=FBgn0027610.1 257 352 +
Chr2	stalkie_big_nohaplotig	CDS	157601879	157601948	100	-	1	ID=FBgn0027610.1.mrna1.cds3;Name=FBgn0027610.1;Parent=FBgn0027610.1.mrna1;Target=FBgn0027610.1 353 422 +
Chr2	stalkie_big_nohaplotig	CDS	157601689	157601821	100	-	2	ID=FBgn0027610.1.mrna1.cds4;Name=FBgn0027610.1;Parent=FBgn0027610.1.mrna1;Target=FBgn0027610.1 423 555 +
Chr2	stalkie_big_nohaplotig	CDS	157601309	157601611	100	-	0	ID=FBgn0027610.1.mrna1.cds5;Name=FBgn0027610.1;Parent=FBgn0027610.1.mrna1;Target=FBgn0027610.1 556 858 +
Chr2	stalkie_big_nohaplotig	mRNA	157807506	157808755	.	-	.	ID=FBgn0014427.1.mrna1;Name=FBgn0014427.1;Parent=FBgn0014427.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1105;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	157808696	157808755	100	-	.	ID=FBgn0014427.1.mrna1.exon1;Name=FBgn0014427.1;Parent=FBgn0014427.1.mrna1;Target=FBgn0014427.1 1 60 +
Chr2	stalkie_big_nohaplotig	exon	157807940	157808616	99	-	.	ID=FBgn0014427.1.mrna1.exon2;Name=FBgn0014427.1;Parent=FBgn0014427.1.mrna1;Target=FBgn0014427.1 61 737 +
Chr2	stalkie_big_nohaplotig	exon	157807506	157807875	100	-	.	ID=FBgn0014427.1.mrna1.exon3;Name=FBgn0014427.1;Parent=FBgn0014427.1.mrna1;Target=FBgn0014427.1 738 1107 +
Chr2	stalkie_big_nohaplotig	CDS	157808696	157808755	100	-	0	ID=FBgn0014427.1.mrna1.cds1;Name=FBgn0014427.1;Parent=FBgn0014427.1.mrna1;Target=FBgn0014427.1 1 60 +
Chr2	stalkie_big_nohaplotig	CDS	157807940	157808616	99	-	0	ID=FBgn0014427.1.mrna1.cds2;Name=FBgn0014427.1;Parent=FBgn0014427.1.mrna1;Target=FBgn0014427.1 61 737 +
Chr2	stalkie_big_nohaplotig	CDS	157807506	157807875	100	-	2	ID=FBgn0014427.1.mrna1.cds3;Name=FBgn0014427.1;Parent=FBgn0014427.1.mrna1;Target=FBgn0014427.1 738 1107 +
Chr1	stalkie_big_nohaplotig	mRNA	136960455	136962628	.	+	.	ID=AGAP000499.1.mrna1;Name=AGAP000499.1;Parent=AGAP000499.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=1225;mismatches=2;indels=4;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	136960455	136960976	99	+	.	ID=AGAP000499.1.mrna1.exon1;Name=AGAP000499.1;Parent=AGAP000499.1.mrna1;Target=AGAP000499.1 1 522 +
Chr1	stalkie_big_nohaplotig	exon	136961865	136962151	100	+	.	ID=AGAP000499.1.mrna1.exon2;Name=AGAP000499.1;Parent=AGAP000499.1.mrna1;Target=AGAP000499.1 523 809 +
Chr1	stalkie_big_nohaplotig	exon	136962207	136962628	99	+	.	ID=AGAP000499.1.mrna1.exon3;Name=AGAP000499.1;Parent=AGAP000499.1.mrna1;Target=AGAP000499.1 810 1227 +
Chr1	stalkie_big_nohaplotig	CDS	136960455	136960976	99	+	0	ID=AGAP000499.1.mrna1.cds1;Name=AGAP000499.1;Parent=AGAP000499.1.mrna1;Target=AGAP000499.1 1 522 +
Chr1	stalkie_big_nohaplotig	CDS	136961865	136962151	100	+	0	ID=AGAP000499.1.mrna1.cds2;Name=AGAP000499.1;Parent=AGAP000499.1.mrna1;Target=AGAP000499.1 523 809 +
Chr1	stalkie_big_nohaplotig	CDS	136962207	136962628	99	+	2	ID=AGAP000499.1.mrna1.cds3;Name=AGAP000499.1;Parent=AGAP000499.1.mrna1;Target=AGAP000499.1 810 1227 +
Chr1	stalkie_big_nohaplotig	mRNA	137037075	137041445	.	+	.	ID=FBgn0001337.1.mrna1;Name=FBgn0001337.1;Parent=FBgn0001337.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=3078;mismatches=15;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	137037075	137037110	100	+	.	ID=FBgn0001337.1.mrna1.exon1;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 1 36 +
Chr1	stalkie_big_nohaplotig	exon	137037177	137037528	99	+	.	ID=FBgn0001337.1.mrna1.exon2;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 37 388 +
Chr1	stalkie_big_nohaplotig	exon	137037582	137037738	100	+	.	ID=FBgn0001337.1.mrna1.exon3;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 389 545 +
Chr1	stalkie_big_nohaplotig	exon	137037814	137037966	100	+	.	ID=FBgn0001337.1.mrna1.exon4;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 546 698 +
Chr1	stalkie_big_nohaplotig	exon	137038017	137038399	99	+	.	ID=FBgn0001337.1.mrna1.exon5;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 699 1081 +
Chr1	stalkie_big_nohaplotig	exon	137038460	137038653	98	+	.	ID=FBgn0001337.1.mrna1.exon6;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 1082 1275 +
Chr1	stalkie_big_nohaplotig	exon	137038779	137039185	99	+	.	ID=FBgn0001337.1.mrna1.exon7;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 1276 1682 +
Chr1	stalkie_big_nohaplotig	exon	137039256	137039407	98	+	.	ID=FBgn0001337.1.mrna1.exon8;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 1683 1834 +
Chr1	stalkie_big_nohaplotig	exon	137039530	137039912	100	+	.	ID=FBgn0001337.1.mrna1.exon9;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 1835 2217 +
Chr1	stalkie_big_nohaplotig	exon	137039968	137040137	99	+	.	ID=FBgn0001337.1.mrna1.exon10;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 2218 2387 +
Chr1	stalkie_big_nohaplotig	exon	137040559	137040768	98	+	.	ID=FBgn0001337.1.mrna1.exon11;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 2388 2597 +
Chr1	stalkie_big_nohaplotig	exon	137040845	137041268	99	+	.	ID=FBgn0001337.1.mrna1.exon12;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 2598 3021 +
Chr1	stalkie_big_nohaplotig	exon	137041374	137041445	100	+	.	ID=FBgn0001337.1.mrna1.exon13;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 3022 3093 +
Chr1	stalkie_big_nohaplotig	CDS	137037075	137037110	100	+	0	ID=FBgn0001337.1.mrna1.cds1;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 1 36 +
Chr1	stalkie_big_nohaplotig	CDS	137037177	137037528	99	+	0	ID=FBgn0001337.1.mrna1.cds2;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 37 388 +
Chr1	stalkie_big_nohaplotig	CDS	137037582	137037738	100	+	1	ID=FBgn0001337.1.mrna1.cds3;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 389 545 +
Chr1	stalkie_big_nohaplotig	CDS	137037814	137037966	100	+	2	ID=FBgn0001337.1.mrna1.cds4;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 546 698 +
Chr1	stalkie_big_nohaplotig	CDS	137038017	137038399	99	+	2	ID=FBgn0001337.1.mrna1.cds5;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 699 1081 +
Chr1	stalkie_big_nohaplotig	CDS	137038460	137038653	98	+	1	ID=FBgn0001337.1.mrna1.cds6;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 1082 1275 +
Chr1	stalkie_big_nohaplotig	CDS	137038779	137039185	99	+	0	ID=FBgn0001337.1.mrna1.cds7;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 1276 1682 +
Chr1	stalkie_big_nohaplotig	CDS	137039256	137039407	98	+	2	ID=FBgn0001337.1.mrna1.cds8;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 1683 1834 +
Chr1	stalkie_big_nohaplotig	CDS	137039530	137039912	100	+	1	ID=FBgn0001337.1.mrna1.cds9;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 1835 2217 +
Chr1	stalkie_big_nohaplotig	CDS	137039968	137040137	99	+	0	ID=FBgn0001337.1.mrna1.cds10;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 2218 2387 +
Chr1	stalkie_big_nohaplotig	CDS	137040559	137040768	98	+	2	ID=FBgn0001337.1.mrna1.cds11;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 2388 2597 +
Chr1	stalkie_big_nohaplotig	CDS	137040845	137041268	99	+	2	ID=FBgn0001337.1.mrna1.cds12;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 2598 3021 +
Chr1	stalkie_big_nohaplotig	CDS	137041374	137041445	100	+	0	ID=FBgn0001337.1.mrna1.cds13;Name=FBgn0001337.1;Parent=FBgn0001337.1.mrna1;Target=FBgn0001337.1 3022 3093 +
Chr1	stalkie_big_nohaplotig	mRNA	171357323	171358189	.	+	.	ID=FBgn0016697.2.mrna1;Name=FBgn0016697.2;Parent=FBgn0016697.2.path1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=859;mismatches=8;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	171357323	171358189	99	+	.	ID=FBgn0016697.2.mrna1.exon1;Name=FBgn0016697.2;Parent=FBgn0016697.2.mrna1;Target=FBgn0016697.2 867 1 .
Chr1	stalkie_big_nohaplotig	CDS	171357323	171358189	99	+	0	ID=FBgn0016697.2.mrna1.cds1;Name=FBgn0016697.2;Parent=FBgn0016697.2.mrna1;Target=FBgn0016697.2 867 1 .
Chr1	stalkie_big_nohaplotig	mRNA	59425021	59427013	.	+	.	ID=FBgn0016696.1.mrna1;Name=FBgn0016696.1;Parent=FBgn0016696.1.path1;Dir=sensecoverage=100.0;identity=99.4;matches=1920;mismatches=11;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	59425021	59426441	99	+	.	ID=FBgn0016696.1.mrna1.exon1;Name=FBgn0016696.1;Parent=FBgn0016696.1.mrna1;Target=FBgn0016696.1 1 1422 +
Chr1	stalkie_big_nohaplotig	exon	59426504	59427013	99	+	.	ID=FBgn0016696.1.mrna1.exon2;Name=FBgn0016696.1;Parent=FBgn0016696.1.mrna1;Target=FBgn0016696.1 1423 1932 +
Chr1	stalkie_big_nohaplotig	CDS	59425023	59425078	98	+	0	ID=FBgn0016696.1.mrna1.cds1;Name=FBgn0016696.1;Parent=FBgn0016696.1.mrna1;Target=FBgn0016696.1 3 59 +
Chr2	stalkie_big_nohaplotig	mRNA	130687483	130688074	.	+	.	ID=FBgn0038943.1.mrna1;Name=FBgn0038943.1;Parent=FBgn0038943.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=534;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	130687483	130687512	100	+	.	ID=FBgn0038943.1.mrna1.exon1;Name=FBgn0038943.1;Parent=FBgn0038943.1.mrna1;Target=FBgn0038943.1 1 30 +
Chr2	stalkie_big_nohaplotig	exon	130687571	130688074	100	+	.	ID=FBgn0038943.1.mrna1.exon2;Name=FBgn0038943.1;Parent=FBgn0038943.1.mrna1;Target=FBgn0038943.1 31 534 +
Chr2	stalkie_big_nohaplotig	CDS	130687483	130687512	100	+	0	ID=FBgn0038943.1.mrna1.cds1;Name=FBgn0038943.1;Parent=FBgn0038943.1.mrna1;Target=FBgn0038943.1 1 30 +
Chr2	stalkie_big_nohaplotig	CDS	130687571	130688074	100	+	0	ID=FBgn0038943.1.mrna1.cds2;Name=FBgn0038943.1;Parent=FBgn0038943.1.mrna1;Target=FBgn0038943.1 31 534 +
Chr2	stalkie_big_nohaplotig	mRNA	130577103	130577669	.	-	.	ID=FBgn0037611.1.mrna1;Name=FBgn0037611.1;Parent=FBgn0037611.1.path1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=566;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	130577103	130577669	99	-	.	ID=FBgn0037611.1.mrna1.exon1;Name=FBgn0037611.1;Parent=FBgn0037611.1.mrna1;Target=FBgn0037611.1 567 1 .
Chr2	stalkie_big_nohaplotig	CDS	130577103	130577669	99	-	0	ID=FBgn0037611.1.mrna1.cds1;Name=FBgn0037611.1;Parent=FBgn0037611.1.mrna1;Target=FBgn0037611.1 567 1 .
Chr2	stalkie_big_nohaplotig	mRNA	130596727	130599402	.	-	.	ID=FBgn0038326.1.mrna1;Name=FBgn0038326.1;Parent=FBgn0038326.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1167;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	130599382	130599402	100	-	.	ID=FBgn0038326.1.mrna1.exon1;Name=FBgn0038326.1;Parent=FBgn0038326.1.mrna1;Target=FBgn0038326.1 1 21 +
Chr2	stalkie_big_nohaplotig	exon	130598370	130599245	100	-	.	ID=FBgn0038326.1.mrna1.exon2;Name=FBgn0038326.1;Parent=FBgn0038326.1.mrna1;Target=FBgn0038326.1 22 897 +
Chr2	stalkie_big_nohaplotig	exon	130596727	130596996	100	-	.	ID=FBgn0038326.1.mrna1.exon3;Name=FBgn0038326.1;Parent=FBgn0038326.1.mrna1;Target=FBgn0038326.1 898 1167 +
Chr2	stalkie_big_nohaplotig	CDS	130599382	130599402	100	-	0	ID=FBgn0038326.1.mrna1.cds1;Name=FBgn0038326.1;Parent=FBgn0038326.1.mrna1;Target=FBgn0038326.1 1 21 +
Chr2	stalkie_big_nohaplotig	CDS	130598370	130599245	100	-	0	ID=FBgn0038326.1.mrna1.cds2;Name=FBgn0038326.1;Parent=FBgn0038326.1.mrna1;Target=FBgn0038326.1 22 897 +
Chr2	stalkie_big_nohaplotig	CDS	130596727	130596996	100	-	0	ID=FBgn0038326.1.mrna1.cds3;Name=FBgn0038326.1;Parent=FBgn0038326.1.mrna1;Target=FBgn0038326.1 898 1167 +
Chr2	stalkie_big_nohaplotig	mRNA	130600382	130601347	.	-	.	ID=FBgn0260467.1.mrna1;Name=FBgn0260467.1;Parent=FBgn0260467.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=893;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	130600723	130601347	99	-	.	ID=FBgn0260467.1.mrna1.exon1;Name=FBgn0260467.1;Parent=FBgn0260467.1.mrna1;Target=FBgn0260467.1 1 625 +
Chr2	stalkie_big_nohaplotig	exon	130600382	130600650	100	-	.	ID=FBgn0260467.1.mrna1.exon2;Name=FBgn0260467.1;Parent=FBgn0260467.1.mrna1;Target=FBgn0260467.1 626 894 +
Chr2	stalkie_big_nohaplotig	CDS	130600723	130601347	99	-	0	ID=FBgn0260467.1.mrna1.cds1;Name=FBgn0260467.1;Parent=FBgn0260467.1.mrna1;Target=FBgn0260467.1 1 625 +
Chr2	stalkie_big_nohaplotig	CDS	130600382	130600650	100	-	1	ID=FBgn0260467.1.mrna1.cds2;Name=FBgn0260467.1;Parent=FBgn0260467.1.mrna1;Target=FBgn0260467.1 626 894 +
Chr2	stalkie_big_nohaplotig	mRNA	147495386	147497947	.	+	.	ID=FBgn0261065.1.mrna1;Name=FBgn0261065.1;Parent=FBgn0261065.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=2098;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	147495386	147495501	100	+	.	ID=FBgn0261065.1.mrna1.exon1;Name=FBgn0261065.1;Parent=FBgn0261065.1.mrna1;Target=FBgn0261065.1 1 116 +
Chr2	stalkie_big_nohaplotig	exon	147495572	147495635	100	+	.	ID=FBgn0261065.1.mrna1.exon2;Name=FBgn0261065.1;Parent=FBgn0261065.1.mrna1;Target=FBgn0261065.1 117 180 +
Chr2	stalkie_big_nohaplotig	exon	147495767	147495864	100	+	.	ID=FBgn0261065.1.mrna1.exon3;Name=FBgn0261065.1;Parent=FBgn0261065.1.mrna1;Target=FBgn0261065.1 181 278 +
Chr2	stalkie_big_nohaplotig	exon	147495928	147496957	100	+	.	ID=FBgn0261065.1.mrna1.exon4;Name=FBgn0261065.1;Parent=FBgn0261065.1.mrna1;Target=FBgn0261065.1 279 1308 +
Chr2	stalkie_big_nohaplotig	exon	147497027	147497288	100	+	.	ID=FBgn0261065.1.mrna1.exon5;Name=FBgn0261065.1;Parent=FBgn0261065.1.mrna1;Target=FBgn0261065.1 1309 1570 +
Chr2	stalkie_big_nohaplotig	exon	147497356	147497801	99	+	.	ID=FBgn0261065.1.mrna1.exon6;Name=FBgn0261065.1;Parent=FBgn0261065.1.mrna1;Target=FBgn0261065.1 1571 2016 +
Chr2	stalkie_big_nohaplotig	exon	147497864	147497947	100	+	.	ID=FBgn0261065.1.mrna1.exon7;Name=FBgn0261065.1;Parent=FBgn0261065.1.mrna1;Target=FBgn0261065.1 2017 2100 +
Chr2	stalkie_big_nohaplotig	CDS	147495386	147495501	100	+	0	ID=FBgn0261065.1.mrna1.cds1;Name=FBgn0261065.1;Parent=FBgn0261065.1.mrna1;Target=FBgn0261065.1 1 116 +
Chr2	stalkie_big_nohaplotig	CDS	147495572	147495635	100	+	2	ID=FBgn0261065.1.mrna1.cds2;Name=FBgn0261065.1;Parent=FBgn0261065.1.mrna1;Target=FBgn0261065.1 117 180 +
Chr2	stalkie_big_nohaplotig	CDS	147495767	147495864	100	+	0	ID=FBgn0261065.1.mrna1.cds3;Name=FBgn0261065.1;Parent=FBgn0261065.1.mrna1;Target=FBgn0261065.1 181 278 +
Chr2	stalkie_big_nohaplotig	CDS	147495928	147496957	100	+	2	ID=FBgn0261065.1.mrna1.cds4;Name=FBgn0261065.1;Parent=FBgn0261065.1.mrna1;Target=FBgn0261065.1 279 1308 +
Chr2	stalkie_big_nohaplotig	CDS	147497027	147497288	100	+	0	ID=FBgn0261065.1.mrna1.cds5;Name=FBgn0261065.1;Parent=FBgn0261065.1.mrna1;Target=FBgn0261065.1 1309 1570 +
Chr2	stalkie_big_nohaplotig	CDS	147497356	147497801	99	+	1	ID=FBgn0261065.1.mrna1.cds6;Name=FBgn0261065.1;Parent=FBgn0261065.1.mrna1;Target=FBgn0261065.1 1571 2016 +
Chr2	stalkie_big_nohaplotig	CDS	147497864	147497947	100	+	0	ID=FBgn0261065.1.mrna1.cds7;Name=FBgn0261065.1;Parent=FBgn0261065.1.mrna1;Target=FBgn0261065.1 2017 2100 +
Chr2	stalkie_big_nohaplotig	mRNA	55238801	55254740	.	-	.	ID=FBgn0035087.1.mrna1;Name=FBgn0035087.1;Parent=FBgn0035087.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=927;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	55254640	55254740	100	-	.	ID=FBgn0035087.1.mrna1.exon1;Name=FBgn0035087.1;Parent=FBgn0035087.1.mrna1;Target=FBgn0035087.1 1 101 +
Chr2	stalkie_big_nohaplotig	exon	55242059	55242200	100	-	.	ID=FBgn0035087.1.mrna1.exon2;Name=FBgn0035087.1;Parent=FBgn0035087.1.mrna1;Target=FBgn0035087.1 102 243 +
Chr2	stalkie_big_nohaplotig	exon	55238801	55239484	100	-	.	ID=FBgn0035087.1.mrna1.exon3;Name=FBgn0035087.1;Parent=FBgn0035087.1.mrna1;Target=FBgn0035087.1 244 927 +
Chr2	stalkie_big_nohaplotig	CDS	55254640	55254740	100	-	0	ID=FBgn0035087.1.mrna1.cds1;Name=FBgn0035087.1;Parent=FBgn0035087.1.mrna1;Target=FBgn0035087.1 1 101 +
Chr2	stalkie_big_nohaplotig	CDS	55242059	55242200	100	-	2	ID=FBgn0035087.1.mrna1.cds2;Name=FBgn0035087.1;Parent=FBgn0035087.1.mrna1;Target=FBgn0035087.1 102 243 +
Chr2	stalkie_big_nohaplotig	CDS	55238801	55239484	100	-	0	ID=FBgn0035087.1.mrna1.cds3;Name=FBgn0035087.1;Parent=FBgn0035087.1.mrna1;Target=FBgn0035087.1 244 927 +
Chr1	stalkie_big_nohaplotig	mRNA	31428838	31442803	.	+	.	ID=FBgn0035144.1.mrna1;Name=FBgn0035144.1;Parent=FBgn0035144.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=1954;mismatches=11;indels=3;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	31428838	31429037	99	+	.	ID=FBgn0035144.1.mrna1.exon1;Name=FBgn0035144.1;Parent=FBgn0035144.1.mrna1;Target=FBgn0035144.1 1 200 +
Chr1	stalkie_big_nohaplotig	exon	31439337	31440092	99	+	.	ID=FBgn0035144.1.mrna1.exon2;Name=FBgn0035144.1;Parent=FBgn0035144.1.mrna1;Target=FBgn0035144.1 201 956 +
Chr1	stalkie_big_nohaplotig	exon	31441725	31441897	98	+	.	ID=FBgn0035144.1.mrna1.exon3;Name=FBgn0035144.1;Parent=FBgn0035144.1.mrna1;Target=FBgn0035144.1 957 1129 +
Chr1	stalkie_big_nohaplotig	exon	31441968	31442803	99	+	.	ID=FBgn0035144.1.mrna1.exon4;Name=FBgn0035144.1;Parent=FBgn0035144.1.mrna1;Target=FBgn0035144.1 1130 1968 +
Chr1	stalkie_big_nohaplotig	CDS	31428838	31429037	99	+	0	ID=FBgn0035144.1.mrna1.cds1;Name=FBgn0035144.1;Parent=FBgn0035144.1.mrna1;Target=FBgn0035144.1 1 200 +
Chr1	stalkie_big_nohaplotig	CDS	31439337	31440092	99	+	2	ID=FBgn0035144.1.mrna1.cds2;Name=FBgn0035144.1;Parent=FBgn0035144.1.mrna1;Target=FBgn0035144.1 201 956 +
Chr1	stalkie_big_nohaplotig	CDS	31441725	31441897	98	+	2	ID=FBgn0035144.1.mrna1.cds3;Name=FBgn0035144.1;Parent=FBgn0035144.1.mrna1;Target=FBgn0035144.1 957 1129 +
Chr1	stalkie_big_nohaplotig	CDS	31441968	31442803	99	+	1	ID=FBgn0035144.1.mrna1.cds4;Name=FBgn0035144.1;Parent=FBgn0035144.1.mrna1;Target=FBgn0035144.1 1130 1968 +
Chr1	stalkie_big_nohaplotig	mRNA	89099469	89101504	.	-	.	ID=FBgn0030417.1.mrna1;Name=FBgn0030417.1;Parent=FBgn0030417.1.path1;Dir=sensecoverage=100.0;identity=98.6;matches=1923;mismatches=5;indels=23;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	89101059	89101504	100	-	.	ID=FBgn0030417.1.mrna1.exon1;Name=FBgn0030417.1;Parent=FBgn0030417.1.mrna1;Target=FBgn0030417.1 1 446 +
Chr1	stalkie_big_nohaplotig	exon	89099469	89100954	98	-	.	ID=FBgn0030417.1.mrna1.exon2;Name=FBgn0030417.1;Parent=FBgn0030417.1.mrna1;Target=FBgn0030417.1 447 1947 +
Chr1	stalkie_big_nohaplotig	CDS	89101059	89101504	100	-	0	ID=FBgn0030417.1.mrna1.cds1;Name=FBgn0030417.1;Parent=FBgn0030417.1.mrna1;Target=FBgn0030417.1 1 446 +
Chr1	stalkie_big_nohaplotig	CDS	89099469	89100954	98	-	2	ID=FBgn0030417.1.mrna1.cds2;Name=FBgn0030417.1;Parent=FBgn0030417.1.mrna1;Target=FBgn0030417.1 447 1947 +
Chr1	stalkie_big_nohaplotig	mRNA	88931097	88948458	.	+	.	ID=FBgn0022942.1.mrna1;Name=FBgn0022942.1;Parent=FBgn0022942.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2417;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	88931097	88931154	100	+	.	ID=FBgn0022942.1.mrna1.exon1;Name=FBgn0022942.1;Parent=FBgn0022942.1.mrna1;Target=FBgn0022942.1 1 58 +
Chr1	stalkie_big_nohaplotig	exon	88931208	88932546	99	+	.	ID=FBgn0022942.1.mrna1.exon2;Name=FBgn0022942.1;Parent=FBgn0022942.1.mrna1;Target=FBgn0022942.1 59 1397 +
Chr1	stalkie_big_nohaplotig	exon	88932608	88932711	100	+	.	ID=FBgn0022942.1.mrna1.exon3;Name=FBgn0022942.1;Parent=FBgn0022942.1.mrna1;Target=FBgn0022942.1 1398 1501 +
Chr1	stalkie_big_nohaplotig	exon	88944010	88944257	100	+	.	ID=FBgn0022942.1.mrna1.exon4;Name=FBgn0022942.1;Parent=FBgn0022942.1.mrna1;Target=FBgn0022942.1 1502 1749 +
Chr1	stalkie_big_nohaplotig	exon	88944316	88944559	100	+	.	ID=FBgn0022942.1.mrna1.exon5;Name=FBgn0022942.1;Parent=FBgn0022942.1.mrna1;Target=FBgn0022942.1 1750 1993 +
Chr1	stalkie_big_nohaplotig	exon	88944645	88944769	100	+	.	ID=FBgn0022942.1.mrna1.exon6;Name=FBgn0022942.1;Parent=FBgn0022942.1.mrna1;Target=FBgn0022942.1 1994 2118 +
Chr1	stalkie_big_nohaplotig	exon	88948102	88948290	100	+	.	ID=FBgn0022942.1.mrna1.exon7;Name=FBgn0022942.1;Parent=FBgn0022942.1.mrna1;Target=FBgn0022942.1 2119 2307 +
Chr1	stalkie_big_nohaplotig	exon	88948348	88948458	100	+	.	ID=FBgn0022942.1.mrna1.exon8;Name=FBgn0022942.1;Parent=FBgn0022942.1.mrna1;Target=FBgn0022942.1 2308 2418 +
Chr1	stalkie_big_nohaplotig	CDS	88931097	88931154	100	+	0	ID=FBgn0022942.1.mrna1.cds1;Name=FBgn0022942.1;Parent=FBgn0022942.1.mrna1;Target=FBgn0022942.1 1 58 +
Chr1	stalkie_big_nohaplotig	CDS	88931208	88932546	99	+	1	ID=FBgn0022942.1.mrna1.cds2;Name=FBgn0022942.1;Parent=FBgn0022942.1.mrna1;Target=FBgn0022942.1 59 1397 +
Chr1	stalkie_big_nohaplotig	CDS	88932608	88932711	100	+	2	ID=FBgn0022942.1.mrna1.cds3;Name=FBgn0022942.1;Parent=FBgn0022942.1.mrna1;Target=FBgn0022942.1 1398 1501 +
Chr1	stalkie_big_nohaplotig	CDS	88944010	88944257	100	+	1	ID=FBgn0022942.1.mrna1.cds4;Name=FBgn0022942.1;Parent=FBgn0022942.1.mrna1;Target=FBgn0022942.1 1502 1749 +
Chr1	stalkie_big_nohaplotig	CDS	88944316	88944559	100	+	0	ID=FBgn0022942.1.mrna1.cds5;Name=FBgn0022942.1;Parent=FBgn0022942.1.mrna1;Target=FBgn0022942.1 1750 1993 +
Chr1	stalkie_big_nohaplotig	CDS	88944645	88944769	100	+	1	ID=FBgn0022942.1.mrna1.cds6;Name=FBgn0022942.1;Parent=FBgn0022942.1.mrna1;Target=FBgn0022942.1 1994 2118 +
Chr1	stalkie_big_nohaplotig	CDS	88948102	88948290	100	+	0	ID=FBgn0022942.1.mrna1.cds7;Name=FBgn0022942.1;Parent=FBgn0022942.1.mrna1;Target=FBgn0022942.1 2119 2307 +
Chr1	stalkie_big_nohaplotig	CDS	88948348	88948458	100	+	0	ID=FBgn0022942.1.mrna1.cds8;Name=FBgn0022942.1;Parent=FBgn0022942.1.mrna1;Target=FBgn0022942.1 2308 2418 +
Chr1	stalkie_big_nohaplotig	mRNA	88950759	88952252	.	+	.	ID=FBgn0030395.1.mrna1;Name=FBgn0030395.1;Parent=FBgn0030395.1.path1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1485;mismatches=9;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	88950759	88952252	99	+	.	ID=FBgn0030395.1.mrna1.exon1;Name=FBgn0030395.1;Parent=FBgn0030395.1.mrna1;Target=FBgn0030395.1 1494 1 .
Chr1	stalkie_big_nohaplotig	CDS	88950759	88952252	99	+	0	ID=FBgn0030395.1.mrna1.cds1;Name=FBgn0030395.1;Parent=FBgn0030395.1.mrna1;Target=FBgn0030395.1 1494 1 .
ChrX	stalkie_big_nohaplotig	mRNA	70018421	70019487	.	+	.	ID=ORF1539.mrna3;Name=ORF1539;Parent=ORF1539.path3;Dir=indeterminatecoverage=99.9;identity=89.1;matches=952;mismatches=114;indels=2;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	70018421	70019487	89	+	.	ID=ORF1539.mrna3.exon1;Name=ORF1539;Parent=ORF1539.mrna3;Target=ORF1539 1068 2 .
ChrX	stalkie_big_nohaplotig	CDS	70018474	70019487	89	+	0	ID=ORF1539.mrna3.cds1;Name=ORF1539;Parent=ORF1539.mrna3;Target=ORF1539 1068 55 .
ChrX	stalkie_big_nohaplotig	mRNA	69841545	69842429	.	-	.	ID=ORF2632.mrna1;Name=ORF2632;Parent=ORF2632.path1;Dir=sensecoverage=100.0;identity=99.2;matches=824;mismatches=7;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	69842260	69842429	98	-	.	ID=ORF2632.mrna1.exon1;Name=ORF2632;Parent=ORF2632.mrna1;Target=ORF2632 1 170 +
ChrX	stalkie_big_nohaplotig	exon	69841545	69842205	99	-	.	ID=ORF2632.mrna1.exon2;Name=ORF2632;Parent=ORF2632.mrna1;Target=ORF2632 171 831 +
ChrX	stalkie_big_nohaplotig	CDS	69842260	69842429	98	-	0	ID=ORF2632.mrna1.cds1;Name=ORF2632;Parent=ORF2632.mrna1;Target=ORF2632 1 170 +
ChrX	stalkie_big_nohaplotig	CDS	69841545	69842205	99	-	2	ID=ORF2632.mrna1.cds2;Name=ORF2632;Parent=ORF2632.mrna1;Target=ORF2632 171 831 +
Chr1	stalkie_big_nohaplotig	mRNA	138685405	138687767	.	-	.	ID=FBgn0031432.1.mrna1;Name=FBgn0031432.1;Parent=FBgn0031432.1.path1;Dir=sensecoverage=100.0;identity=99.1;matches=1159;mismatches=11;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	138687669	138687767	100	-	.	ID=FBgn0031432.1.mrna1.exon1;Name=FBgn0031432.1;Parent=FBgn0031432.1.mrna1;Target=FBgn0031432.1 1 99 +
Chr1	stalkie_big_nohaplotig	exon	138686709	138686810	100	-	.	ID=FBgn0031432.1.mrna1.exon2;Name=FBgn0031432.1;Parent=FBgn0031432.1.mrna1;Target=FBgn0031432.1 100 201 +
Chr1	stalkie_big_nohaplotig	exon	138686232	138686651	100	-	.	ID=FBgn0031432.1.mrna1.exon3;Name=FBgn0031432.1;Parent=FBgn0031432.1.mrna1;Target=FBgn0031432.1 202 621 +
Chr1	stalkie_big_nohaplotig	exon	138686051	138686174	97	-	.	ID=FBgn0031432.1.mrna1.exon4;Name=FBgn0031432.1;Parent=FBgn0031432.1.mrna1;Target=FBgn0031432.1 622 745 +
Chr1	stalkie_big_nohaplotig	exon	138685722	138685985	97	-	.	ID=FBgn0031432.1.mrna1.exon5;Name=FBgn0031432.1;Parent=FBgn0031432.1.mrna1;Target=FBgn0031432.1 746 1009 +
Chr1	stalkie_big_nohaplotig	exon	138685405	138685565	99	-	.	ID=FBgn0031432.1.mrna1.exon6;Name=FBgn0031432.1;Parent=FBgn0031432.1.mrna1;Target=FBgn0031432.1 1010 1170 +
Chr1	stalkie_big_nohaplotig	CDS	138687669	138687767	100	-	0	ID=FBgn0031432.1.mrna1.cds1;Name=FBgn0031432.1;Parent=FBgn0031432.1.mrna1;Target=FBgn0031432.1 1 99 +
Chr1	stalkie_big_nohaplotig	CDS	138686709	138686810	100	-	0	ID=FBgn0031432.1.mrna1.cds2;Name=FBgn0031432.1;Parent=FBgn0031432.1.mrna1;Target=FBgn0031432.1 100 201 +
Chr1	stalkie_big_nohaplotig	CDS	138686232	138686651	100	-	0	ID=FBgn0031432.1.mrna1.cds3;Name=FBgn0031432.1;Parent=FBgn0031432.1.mrna1;Target=FBgn0031432.1 202 621 +
Chr1	stalkie_big_nohaplotig	CDS	138686051	138686174	97	-	0	ID=FBgn0031432.1.mrna1.cds4;Name=FBgn0031432.1;Parent=FBgn0031432.1.mrna1;Target=FBgn0031432.1 622 745 +
Chr1	stalkie_big_nohaplotig	CDS	138685722	138685985	97	-	1	ID=FBgn0031432.1.mrna1.cds5;Name=FBgn0031432.1;Parent=FBgn0031432.1.mrna1;Target=FBgn0031432.1 746 1009 +
Chr1	stalkie_big_nohaplotig	CDS	138685405	138685565	99	-	1	ID=FBgn0031432.1.mrna1.cds6;Name=FBgn0031432.1;Parent=FBgn0031432.1.mrna1;Target=FBgn0031432.1 1010 1170 +
ChrX	stalkie_big_nohaplotig	mRNA	40973117	40996683	.	-	.	ID=FBgn0032618.1.mrna1;Name=FBgn0032618.1;Parent=FBgn0032618.1.path1;Dir=sensecoverage=100.0;identity=99.2;matches=997;mismatches=8;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	40996375	40996683	99	-	.	ID=FBgn0032618.1.mrna1.exon1;Name=FBgn0032618.1;Parent=FBgn0032618.1.mrna1;Target=FBgn0032618.1 1 309 +
ChrX	stalkie_big_nohaplotig	exon	40974112	40974580	99	-	.	ID=FBgn0032618.1.mrna1.exon2;Name=FBgn0032618.1;Parent=FBgn0032618.1.mrna1;Target=FBgn0032618.1 310 778 +
ChrX	stalkie_big_nohaplotig	exon	40973117	40973343	98	-	.	ID=FBgn0032618.1.mrna1.exon3;Name=FBgn0032618.1;Parent=FBgn0032618.1.mrna1;Target=FBgn0032618.1 779 1005 +
ChrX	stalkie_big_nohaplotig	CDS	40996375	40996683	99	-	0	ID=FBgn0032618.1.mrna1.cds1;Name=FBgn0032618.1;Parent=FBgn0032618.1.mrna1;Target=FBgn0032618.1 1 309 +
ChrX	stalkie_big_nohaplotig	CDS	40974112	40974580	99	-	0	ID=FBgn0032618.1.mrna1.cds2;Name=FBgn0032618.1;Parent=FBgn0032618.1.mrna1;Target=FBgn0032618.1 310 778 +
ChrX	stalkie_big_nohaplotig	CDS	40973117	40973343	98	-	1	ID=FBgn0032618.1.mrna1.cds3;Name=FBgn0032618.1;Parent=FBgn0032618.1.mrna1;Target=FBgn0032618.1 779 1005 +
Chr2	stalkie_big_nohaplotig	mRNA	92534149	92535914	.	-	.	ID=ORF469.mrna1;Name=ORF469;Parent=ORF469.path1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=1745;mismatches=21;indels=4;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	92534149	92535914	98	-	.	ID=ORF469.mrna1.exon1;Name=ORF469;Parent=ORF469.mrna1;Target=ORF469 1770 1 .
Chr2	stalkie_big_nohaplotig	CDS	92534149	92535914	98	-	0	ID=ORF469.mrna1.cds1;Name=ORF469;Parent=ORF469.mrna1;Target=ORF469 1770 1 .
Chr2	stalkie_big_nohaplotig	mRNA	92643854	92649176	.	-	.	ID=FBgn0026616.1.mrna1;Name=FBgn0026616.1;Parent=FBgn0026616.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=3712;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	92648697	92649176	100	-	.	ID=FBgn0026616.1.mrna1.exon1;Name=FBgn0026616.1;Parent=FBgn0026616.1.mrna1;Target=FBgn0026616.1 1 480 +
Chr2	stalkie_big_nohaplotig	exon	92648539	92648631	100	-	.	ID=FBgn0026616.1.mrna1.exon2;Name=FBgn0026616.1;Parent=FBgn0026616.1.mrna1;Target=FBgn0026616.1 481 573 +
Chr2	stalkie_big_nohaplotig	exon	92647578	92648475	99	-	.	ID=FBgn0026616.1.mrna1.exon3;Name=FBgn0026616.1;Parent=FBgn0026616.1.mrna1;Target=FBgn0026616.1 574 1471 +
Chr2	stalkie_big_nohaplotig	exon	92645236	92646219	99	-	.	ID=FBgn0026616.1.mrna1.exon4;Name=FBgn0026616.1;Parent=FBgn0026616.1.mrna1;Target=FBgn0026616.1 1472 2455 +
Chr2	stalkie_big_nohaplotig	exon	92644651	92645179	100	-	.	ID=FBgn0026616.1.mrna1.exon5;Name=FBgn0026616.1;Parent=FBgn0026616.1.mrna1;Target=FBgn0026616.1 2456 2984 +
Chr2	stalkie_big_nohaplotig	exon	92643854	92644586	99	-	.	ID=FBgn0026616.1.mrna1.exon6;Name=FBgn0026616.1;Parent=FBgn0026616.1.mrna1;Target=FBgn0026616.1 2985 3717 +
Chr2	stalkie_big_nohaplotig	CDS	92648697	92649176	100	-	0	ID=FBgn0026616.1.mrna1.cds1;Name=FBgn0026616.1;Parent=FBgn0026616.1.mrna1;Target=FBgn0026616.1 1 480 +
Chr2	stalkie_big_nohaplotig	CDS	92648539	92648631	100	-	0	ID=FBgn0026616.1.mrna1.cds2;Name=FBgn0026616.1;Parent=FBgn0026616.1.mrna1;Target=FBgn0026616.1 481 573 +
Chr2	stalkie_big_nohaplotig	CDS	92647578	92648475	99	-	0	ID=FBgn0026616.1.mrna1.cds3;Name=FBgn0026616.1;Parent=FBgn0026616.1.mrna1;Target=FBgn0026616.1 574 1471 +
Chr2	stalkie_big_nohaplotig	CDS	92645236	92646219	99	-	1	ID=FBgn0026616.1.mrna1.cds4;Name=FBgn0026616.1;Parent=FBgn0026616.1.mrna1;Target=FBgn0026616.1 1472 2455 +
Chr2	stalkie_big_nohaplotig	CDS	92644651	92645179	100	-	1	ID=FBgn0026616.1.mrna1.cds5;Name=FBgn0026616.1;Parent=FBgn0026616.1.mrna1;Target=FBgn0026616.1 2456 2984 +
Chr2	stalkie_big_nohaplotig	CDS	92643854	92644586	99	-	2	ID=FBgn0026616.1.mrna1.cds6;Name=FBgn0026616.1;Parent=FBgn0026616.1.mrna1;Target=FBgn0026616.1 2985 3717 +
Chr2	stalkie_big_nohaplotig	mRNA	101679240	101679914	.	+	.	ID=FBgn0002733.1.mrna1;Name=FBgn0002733.1;Parent=FBgn0002733.1.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=675;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	101679240	101679914	100	+	.	ID=FBgn0002733.1.mrna1.exon1;Name=FBgn0002733.1;Parent=FBgn0002733.1.mrna1;Target=FBgn0002733.1 675 1 .
Chr2	stalkie_big_nohaplotig	CDS	101679240	101679914	100	+	0	ID=FBgn0002733.1.mrna1.cds1;Name=FBgn0002733.1;Parent=FBgn0002733.1.mrna1;Target=FBgn0002733.1 675 1 .
Chr1	stalkie_big_nohaplotig	mRNA	15098101	15099607	.	-	.	ID=ORF2996.mrna1;Name=ORF2996;Parent=ORF2996.path1;Dir=sensecoverage=100.0;identity=100.0;matches=783;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	15099527	15099607	100	-	.	ID=ORF2996.mrna1.exon1;Name=ORF2996;Parent=ORF2996.mrna1;Target=ORF2996 1 81 +
Chr1	stalkie_big_nohaplotig	exon	15099396	15099455	100	-	.	ID=ORF2996.mrna1.exon2;Name=ORF2996;Parent=ORF2996.mrna1;Target=ORF2996 82 141 +
Chr1	stalkie_big_nohaplotig	exon	15099272	15099340	100	-	.	ID=ORF2996.mrna1.exon3;Name=ORF2996;Parent=ORF2996.mrna1;Target=ORF2996 142 210 +
Chr1	stalkie_big_nohaplotig	exon	15099150	15099221	100	-	.	ID=ORF2996.mrna1.exon4;Name=ORF2996;Parent=ORF2996.mrna1;Target=ORF2996 211 282 +
Chr1	stalkie_big_nohaplotig	exon	15099028	15099087	100	-	.	ID=ORF2996.mrna1.exon5;Name=ORF2996;Parent=ORF2996.mrna1;Target=ORF2996 283 342 +
Chr1	stalkie_big_nohaplotig	exon	15098442	15098609	100	-	.	ID=ORF2996.mrna1.exon6;Name=ORF2996;Parent=ORF2996.mrna1;Target=ORF2996 343 510 +
Chr1	stalkie_big_nohaplotig	exon	15098101	15098373	100	-	.	ID=ORF2996.mrna1.exon7;Name=ORF2996;Parent=ORF2996.mrna1;Target=ORF2996 511 783 +
Chr1	stalkie_big_nohaplotig	CDS	15099527	15099607	100	-	0	ID=ORF2996.mrna1.cds1;Name=ORF2996;Parent=ORF2996.mrna1;Target=ORF2996 1 81 +
Chr1	stalkie_big_nohaplotig	CDS	15099396	15099455	100	-	0	ID=ORF2996.mrna1.cds2;Name=ORF2996;Parent=ORF2996.mrna1;Target=ORF2996 82 141 +
Chr1	stalkie_big_nohaplotig	CDS	15099272	15099340	100	-	0	ID=ORF2996.mrna1.cds3;Name=ORF2996;Parent=ORF2996.mrna1;Target=ORF2996 142 210 +
Chr1	stalkie_big_nohaplotig	CDS	15099150	15099221	100	-	0	ID=ORF2996.mrna1.cds4;Name=ORF2996;Parent=ORF2996.mrna1;Target=ORF2996 211 282 +
Chr1	stalkie_big_nohaplotig	CDS	15099028	15099087	100	-	0	ID=ORF2996.mrna1.cds5;Name=ORF2996;Parent=ORF2996.mrna1;Target=ORF2996 283 342 +
Chr1	stalkie_big_nohaplotig	CDS	15098442	15098609	100	-	0	ID=ORF2996.mrna1.cds6;Name=ORF2996;Parent=ORF2996.mrna1;Target=ORF2996 343 510 +
Chr1	stalkie_big_nohaplotig	CDS	15098101	15098373	100	-	0	ID=ORF2996.mrna1.cds7;Name=ORF2996;Parent=ORF2996.mrna1;Target=ORF2996 511 783 +
Chr1	stalkie_big_nohaplotig	mRNA	15162923	15257200	.	+	.	ID=FBgn0016081.1.mrna1;Name=FBgn0016081.1;Parent=FBgn0016081.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=10439;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	15162923	15163037	100	+	.	ID=FBgn0016081.1.mrna1.exon1;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 1 115 +
Chr1	stalkie_big_nohaplotig	exon	15172972	15174386	99	+	.	ID=FBgn0016081.1.mrna1.exon2;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 116 1530 +
Chr1	stalkie_big_nohaplotig	exon	15174452	15174589	100	+	.	ID=FBgn0016081.1.mrna1.exon3;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 1531 1668 +
Chr1	stalkie_big_nohaplotig	exon	15174660	15175000	100	+	.	ID=FBgn0016081.1.mrna1.exon4;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 1669 2009 +
Chr1	stalkie_big_nohaplotig	exon	15175064	15175202	100	+	.	ID=FBgn0016081.1.mrna1.exon5;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 2010 2148 +
Chr1	stalkie_big_nohaplotig	exon	15175277	15176489	99	+	.	ID=FBgn0016081.1.mrna1.exon6;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 2149 3361 +
Chr1	stalkie_big_nohaplotig	exon	15176564	15176765	100	+	.	ID=FBgn0016081.1.mrna1.exon7;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 3362 3563 +
Chr1	stalkie_big_nohaplotig	exon	15176828	15177010	100	+	.	ID=FBgn0016081.1.mrna1.exon8;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 3564 3746 +
Chr1	stalkie_big_nohaplotig	exon	15181354	15181521	100	+	.	ID=FBgn0016081.1.mrna1.exon9;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 3747 3914 +
Chr1	stalkie_big_nohaplotig	exon	15181598	15181747	100	+	.	ID=FBgn0016081.1.mrna1.exon10;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 3915 4064 +
Chr1	stalkie_big_nohaplotig	exon	15181926	15182095	100	+	.	ID=FBgn0016081.1.mrna1.exon11;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 4065 4234 +
Chr1	stalkie_big_nohaplotig	exon	15182161	15182315	100	+	.	ID=FBgn0016081.1.mrna1.exon12;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 4235 4389 +
Chr1	stalkie_big_nohaplotig	exon	15182475	15182585	100	+	.	ID=FBgn0016081.1.mrna1.exon13;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 4390 4500 +
Chr1	stalkie_big_nohaplotig	exon	15182686	15182840	100	+	.	ID=FBgn0016081.1.mrna1.exon14;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 4501 4655 +
Chr1	stalkie_big_nohaplotig	exon	15192240	15192400	99	+	.	ID=FBgn0016081.1.mrna1.exon15;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 4656 4816 +
Chr1	stalkie_big_nohaplotig	exon	15245236	15245355	100	+	.	ID=FBgn0016081.1.mrna1.exon16;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 4817 4936 +
Chr1	stalkie_big_nohaplotig	exon	15245486	15245619	100	+	.	ID=FBgn0016081.1.mrna1.exon17;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 4937 5070 +
Chr1	stalkie_big_nohaplotig	exon	15245855	15245953	100	+	.	ID=FBgn0016081.1.mrna1.exon18;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 5071 5169 +
Chr1	stalkie_big_nohaplotig	exon	15247700	15247834	100	+	.	ID=FBgn0016081.1.mrna1.exon19;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 5170 5304 +
Chr1	stalkie_big_nohaplotig	exon	15247947	15248118	100	+	.	ID=FBgn0016081.1.mrna1.exon20;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 5305 5476 +
Chr1	stalkie_big_nohaplotig	exon	15248400	15248502	100	+	.	ID=FBgn0016081.1.mrna1.exon21;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 5477 5579 +
Chr1	stalkie_big_nohaplotig	exon	15249256	15249394	100	+	.	ID=FBgn0016081.1.mrna1.exon22;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 5580 5718 +
Chr1	stalkie_big_nohaplotig	exon	15249480	15249625	100	+	.	ID=FBgn0016081.1.mrna1.exon23;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 5719 5864 +
Chr1	stalkie_big_nohaplotig	exon	15249750	15249915	100	+	.	ID=FBgn0016081.1.mrna1.exon24;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 5865 6030 +
Chr1	stalkie_big_nohaplotig	exon	15250096	15250219	100	+	.	ID=FBgn0016081.1.mrna1.exon25;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 6031 6154 +
Chr1	stalkie_big_nohaplotig	exon	15250727	15251239	100	+	.	ID=FBgn0016081.1.mrna1.exon26;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 6155 6667 +
Chr1	stalkie_big_nohaplotig	exon	15251307	15251849	100	+	.	ID=FBgn0016081.1.mrna1.exon27;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 6668 7210 +
Chr1	stalkie_big_nohaplotig	exon	15251913	15252037	100	+	.	ID=FBgn0016081.1.mrna1.exon28;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 7211 7335 +
Chr1	stalkie_big_nohaplotig	exon	15252114	15252329	100	+	.	ID=FBgn0016081.1.mrna1.exon29;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 7336 7551 +
Chr1	stalkie_big_nohaplotig	exon	15252436	15252942	100	+	.	ID=FBgn0016081.1.mrna1.exon30;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 7552 8058 +
Chr1	stalkie_big_nohaplotig	exon	15253014	15253649	100	+	.	ID=FBgn0016081.1.mrna1.exon31;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 8059 8694 +
Chr1	stalkie_big_nohaplotig	exon	15255228	15256181	100	+	.	ID=FBgn0016081.1.mrna1.exon32;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 8695 9648 +
Chr1	stalkie_big_nohaplotig	exon	15256278	15256523	100	+	.	ID=FBgn0016081.1.mrna1.exon33;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 9649 9894 +
Chr1	stalkie_big_nohaplotig	exon	15256592	15256961	100	+	.	ID=FBgn0016081.1.mrna1.exon34;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 9895 10264 +
Chr1	stalkie_big_nohaplotig	exon	15257022	15257200	100	+	.	ID=FBgn0016081.1.mrna1.exon35;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 10265 10443 +
Chr1	stalkie_big_nohaplotig	CDS	15162923	15163037	100	+	0	ID=FBgn0016081.1.mrna1.cds1;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 1 115 +
Chr1	stalkie_big_nohaplotig	CDS	15172972	15174386	99	+	1	ID=FBgn0016081.1.mrna1.cds2;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 116 1530 +
Chr1	stalkie_big_nohaplotig	CDS	15174452	15174589	100	+	0	ID=FBgn0016081.1.mrna1.cds3;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 1531 1668 +
Chr1	stalkie_big_nohaplotig	CDS	15174660	15175000	100	+	0	ID=FBgn0016081.1.mrna1.cds4;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 1669 2009 +
Chr1	stalkie_big_nohaplotig	CDS	15175064	15175202	100	+	2	ID=FBgn0016081.1.mrna1.cds5;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 2010 2148 +
Chr1	stalkie_big_nohaplotig	CDS	15175277	15176489	99	+	0	ID=FBgn0016081.1.mrna1.cds6;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 2149 3361 +
Chr1	stalkie_big_nohaplotig	CDS	15176564	15176765	100	+	1	ID=FBgn0016081.1.mrna1.cds7;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 3362 3563 +
Chr1	stalkie_big_nohaplotig	CDS	15176828	15177010	100	+	2	ID=FBgn0016081.1.mrna1.cds8;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 3564 3746 +
Chr1	stalkie_big_nohaplotig	CDS	15181354	15181521	100	+	2	ID=FBgn0016081.1.mrna1.cds9;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 3747 3914 +
Chr1	stalkie_big_nohaplotig	CDS	15181598	15181747	100	+	2	ID=FBgn0016081.1.mrna1.cds10;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 3915 4064 +
Chr1	stalkie_big_nohaplotig	CDS	15181926	15182095	100	+	2	ID=FBgn0016081.1.mrna1.cds11;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 4065 4234 +
Chr1	stalkie_big_nohaplotig	CDS	15182161	15182315	100	+	1	ID=FBgn0016081.1.mrna1.cds12;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 4235 4389 +
Chr1	stalkie_big_nohaplotig	CDS	15182475	15182585	100	+	0	ID=FBgn0016081.1.mrna1.cds13;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 4390 4500 +
Chr1	stalkie_big_nohaplotig	CDS	15182686	15182840	100	+	0	ID=FBgn0016081.1.mrna1.cds14;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 4501 4655 +
Chr1	stalkie_big_nohaplotig	CDS	15192240	15192400	99	+	2	ID=FBgn0016081.1.mrna1.cds15;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 4656 4816 +
Chr1	stalkie_big_nohaplotig	CDS	15245236	15245355	100	+	1	ID=FBgn0016081.1.mrna1.cds16;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 4817 4936 +
Chr1	stalkie_big_nohaplotig	CDS	15245486	15245619	100	+	1	ID=FBgn0016081.1.mrna1.cds17;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 4937 5070 +
Chr1	stalkie_big_nohaplotig	CDS	15245855	15245953	100	+	0	ID=FBgn0016081.1.mrna1.cds18;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 5071 5169 +
Chr1	stalkie_big_nohaplotig	CDS	15247700	15247834	100	+	0	ID=FBgn0016081.1.mrna1.cds19;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 5170 5304 +
Chr1	stalkie_big_nohaplotig	CDS	15247947	15248118	100	+	0	ID=FBgn0016081.1.mrna1.cds20;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 5305 5476 +
Chr1	stalkie_big_nohaplotig	CDS	15248400	15248502	100	+	1	ID=FBgn0016081.1.mrna1.cds21;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 5477 5579 +
Chr1	stalkie_big_nohaplotig	CDS	15249256	15249394	100	+	2	ID=FBgn0016081.1.mrna1.cds22;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 5580 5718 +
Chr1	stalkie_big_nohaplotig	CDS	15249480	15249625	100	+	0	ID=FBgn0016081.1.mrna1.cds23;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 5719 5864 +
Chr1	stalkie_big_nohaplotig	CDS	15249750	15249915	100	+	2	ID=FBgn0016081.1.mrna1.cds24;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 5865 6030 +
Chr1	stalkie_big_nohaplotig	CDS	15250096	15250219	100	+	0	ID=FBgn0016081.1.mrna1.cds25;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 6031 6154 +
Chr1	stalkie_big_nohaplotig	CDS	15250727	15251239	100	+	1	ID=FBgn0016081.1.mrna1.cds26;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 6155 6667 +
Chr1	stalkie_big_nohaplotig	CDS	15251307	15251849	100	+	1	ID=FBgn0016081.1.mrna1.cds27;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 6668 7210 +
Chr1	stalkie_big_nohaplotig	CDS	15251913	15252037	100	+	1	ID=FBgn0016081.1.mrna1.cds28;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 7211 7335 +
Chr1	stalkie_big_nohaplotig	CDS	15252114	15252329	100	+	0	ID=FBgn0016081.1.mrna1.cds29;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 7336 7551 +
Chr1	stalkie_big_nohaplotig	CDS	15252436	15252942	100	+	0	ID=FBgn0016081.1.mrna1.cds30;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 7552 8058 +
Chr1	stalkie_big_nohaplotig	CDS	15253014	15253649	100	+	0	ID=FBgn0016081.1.mrna1.cds31;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 8059 8694 +
Chr1	stalkie_big_nohaplotig	CDS	15255228	15256181	100	+	0	ID=FBgn0016081.1.mrna1.cds32;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 8695 9648 +
Chr1	stalkie_big_nohaplotig	CDS	15256278	15256523	100	+	0	ID=FBgn0016081.1.mrna1.cds33;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 9649 9894 +
Chr1	stalkie_big_nohaplotig	CDS	15256592	15256961	100	+	0	ID=FBgn0016081.1.mrna1.cds34;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 9895 10264 +
Chr1	stalkie_big_nohaplotig	CDS	15257022	15257200	100	+	1	ID=FBgn0016081.1.mrna1.cds35;Name=FBgn0016081.1;Parent=FBgn0016081.1.mrna1;Target=FBgn0016081.1 10265 10443 +
Chr1	stalkie_big_nohaplotig	mRNA	15156558	15157953	.	-	.	ID=FBgn0087040.1.mrna1;Name=FBgn0087040.1;Parent=FBgn0087040.1.path1;Dir=indeterminatecoverage=99.4;identity=99.9;matches=1395;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	15156558	15157953	99	-	.	ID=FBgn0087040.1.mrna1.exon1;Name=FBgn0087040.1;Parent=FBgn0087040.1.mrna1;Target=FBgn0087040.1 1404 9 .
Chr1	stalkie_big_nohaplotig	CDS	15156558	15157952	99	-	0	ID=FBgn0087040.1.mrna1.cds1;Name=FBgn0087040.1;Parent=FBgn0087040.1.mrna1;Target=FBgn0087040.1 1404 10 .
Chr2	stalkie_big_nohaplotig	mRNA	88697606	88698799	.	-	.	ID=ORF1184.mrna1;Name=ORF1184;Parent=ORF1184.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1194;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	88697606	88698799	100	-	.	ID=ORF1184.mrna1.exon1;Name=ORF1184;Parent=ORF1184.mrna1;Target=ORF1184 1194 1 .
Chr2	stalkie_big_nohaplotig	CDS	88697606	88698799	100	-	0	ID=ORF1184.mrna1.cds1;Name=ORF1184;Parent=ORF1184.mrna1;Target=ORF1184 1194 1 .
Chr2	stalkie_big_nohaplotig	mRNA	88756032	88757077	.	+	.	ID=FBgn0037713.1.mrna1;Name=FBgn0037713.1;Parent=FBgn0037713.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=770;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	88756032	88756135	99	+	.	ID=FBgn0037713.1.mrna1.exon1;Name=FBgn0037713.1;Parent=FBgn0037713.1.mrna1;Target=FBgn0037713.1 1 104 +
Chr2	stalkie_big_nohaplotig	exon	88756218	88756366	100	+	.	ID=FBgn0037713.1.mrna1.exon2;Name=FBgn0037713.1;Parent=FBgn0037713.1.mrna1;Target=FBgn0037713.1 105 253 +
Chr2	stalkie_big_nohaplotig	exon	88756426	88756600	100	+	.	ID=FBgn0037713.1.mrna1.exon3;Name=FBgn0037713.1;Parent=FBgn0037713.1.mrna1;Target=FBgn0037713.1 254 428 +
Chr2	stalkie_big_nohaplotig	exon	88756683	88756845	100	+	.	ID=FBgn0037713.1.mrna1.exon4;Name=FBgn0037713.1;Parent=FBgn0037713.1.mrna1;Target=FBgn0037713.1 429 591 +
Chr2	stalkie_big_nohaplotig	exon	88756898	88757077	100	+	.	ID=FBgn0037713.1.mrna1.exon5;Name=FBgn0037713.1;Parent=FBgn0037713.1.mrna1;Target=FBgn0037713.1 592 771 +
Chr2	stalkie_big_nohaplotig	CDS	88756032	88756135	99	+	0	ID=FBgn0037713.1.mrna1.cds1;Name=FBgn0037713.1;Parent=FBgn0037713.1.mrna1;Target=FBgn0037713.1 1 104 +
Chr2	stalkie_big_nohaplotig	CDS	88756218	88756366	100	+	2	ID=FBgn0037713.1.mrna1.cds2;Name=FBgn0037713.1;Parent=FBgn0037713.1.mrna1;Target=FBgn0037713.1 105 253 +
Chr2	stalkie_big_nohaplotig	CDS	88756426	88756600	100	+	1	ID=FBgn0037713.1.mrna1.cds3;Name=FBgn0037713.1;Parent=FBgn0037713.1.mrna1;Target=FBgn0037713.1 254 428 +
Chr2	stalkie_big_nohaplotig	CDS	88756683	88756845	100	+	2	ID=FBgn0037713.1.mrna1.cds4;Name=FBgn0037713.1;Parent=FBgn0037713.1.mrna1;Target=FBgn0037713.1 429 591 +
Chr2	stalkie_big_nohaplotig	CDS	88756898	88757077	100	+	0	ID=FBgn0037713.1.mrna1.cds5;Name=FBgn0037713.1;Parent=FBgn0037713.1.mrna1;Target=FBgn0037713.1 592 771 +
ChrX	stalkie_big_nohaplotig	mRNA	80611249	80618008	.	+	.	ID=ORF549.mrna1;Name=ORF549;Parent=ORF549.path1;Dir=sensecoverage=98.7;identity=99.8;matches=1637;mismatches=4;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	80611249	80611312	100	+	.	ID=ORF549.mrna1.exon1;Name=ORF549;Parent=ORF549.mrna1;Target=ORF549 22 85 +
ChrX	stalkie_big_nohaplotig	exon	80614596	80615273	99	+	.	ID=ORF549.mrna1.exon2;Name=ORF549;Parent=ORF549.mrna1;Target=ORF549 86 763 +
ChrX	stalkie_big_nohaplotig	exon	80615355	80615553	100	+	.	ID=ORF549.mrna1.exon3;Name=ORF549;Parent=ORF549.mrna1;Target=ORF549 764 962 +
ChrX	stalkie_big_nohaplotig	exon	80617257	80617450	100	+	.	ID=ORF549.mrna1.exon4;Name=ORF549;Parent=ORF549.mrna1;Target=ORF549 963 1156 +
ChrX	stalkie_big_nohaplotig	exon	80617503	80618008	99	+	.	ID=ORF549.mrna1.exon5;Name=ORF549;Parent=ORF549.mrna1;Target=ORF549 1157 1662 +
ChrX	stalkie_big_nohaplotig	CDS	80611249	80611312	100	+	0	ID=ORF549.mrna1.cds1;Name=ORF549;Parent=ORF549.mrna1;Target=ORF549 22 85 +
ChrX	stalkie_big_nohaplotig	CDS	80614596	80615273	99	+	1	ID=ORF549.mrna1.cds2;Name=ORF549;Parent=ORF549.mrna1;Target=ORF549 86 763 +
ChrX	stalkie_big_nohaplotig	CDS	80615355	80615553	100	+	1	ID=ORF549.mrna1.cds3;Name=ORF549;Parent=ORF549.mrna1;Target=ORF549 764 962 +
ChrX	stalkie_big_nohaplotig	CDS	80617257	80617450	100	+	2	ID=ORF549.mrna1.cds4;Name=ORF549;Parent=ORF549.mrna1;Target=ORF549 963 1156 +
ChrX	stalkie_big_nohaplotig	CDS	80617503	80618008	99	+	1	ID=ORF549.mrna1.cds5;Name=ORF549;Parent=ORF549.mrna1;Target=ORF549 1157 1662 +
Chr2	stalkie_big_nohaplotig	mRNA	22893467	22897775	.	+	.	ID=FBgn0034694.1.mrna1;Name=FBgn0034694.1;Parent=FBgn0034694.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2208;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	22893467	22893611	100	+	.	ID=FBgn0034694.1.mrna1.exon1;Name=FBgn0034694.1;Parent=FBgn0034694.1.mrna1;Target=FBgn0034694.1 1 145 +
Chr2	stalkie_big_nohaplotig	exon	22893671	22893858	100	+	.	ID=FBgn0034694.1.mrna1.exon2;Name=FBgn0034694.1;Parent=FBgn0034694.1.mrna1;Target=FBgn0034694.1 146 333 +
Chr2	stalkie_big_nohaplotig	exon	22894808	22895119	100	+	.	ID=FBgn0034694.1.mrna1.exon3;Name=FBgn0034694.1;Parent=FBgn0034694.1.mrna1;Target=FBgn0034694.1 334 645 +
Chr2	stalkie_big_nohaplotig	exon	22895949	22896686	100	+	.	ID=FBgn0034694.1.mrna1.exon4;Name=FBgn0034694.1;Parent=FBgn0034694.1.mrna1;Target=FBgn0034694.1 646 1383 +
Chr2	stalkie_big_nohaplotig	exon	22896747	22896922	100	+	.	ID=FBgn0034694.1.mrna1.exon5;Name=FBgn0034694.1;Parent=FBgn0034694.1.mrna1;Target=FBgn0034694.1 1384 1559 +
Chr2	stalkie_big_nohaplotig	exon	22896993	22897161	100	+	.	ID=FBgn0034694.1.mrna1.exon6;Name=FBgn0034694.1;Parent=FBgn0034694.1.mrna1;Target=FBgn0034694.1 1560 1728 +
Chr2	stalkie_big_nohaplotig	exon	22897238	22897591	100	+	.	ID=FBgn0034694.1.mrna1.exon7;Name=FBgn0034694.1;Parent=FBgn0034694.1.mrna1;Target=FBgn0034694.1 1729 2082 +
Chr2	stalkie_big_nohaplotig	exon	22897650	22897775	100	+	.	ID=FBgn0034694.1.mrna1.exon8;Name=FBgn0034694.1;Parent=FBgn0034694.1.mrna1;Target=FBgn0034694.1 2083 2208 +
Chr2	stalkie_big_nohaplotig	CDS	22893467	22893611	100	+	0	ID=FBgn0034694.1.mrna1.cds1;Name=FBgn0034694.1;Parent=FBgn0034694.1.mrna1;Target=FBgn0034694.1 1 145 +
Chr2	stalkie_big_nohaplotig	CDS	22893671	22893858	100	+	1	ID=FBgn0034694.1.mrna1.cds2;Name=FBgn0034694.1;Parent=FBgn0034694.1.mrna1;Target=FBgn0034694.1 146 333 +
Chr2	stalkie_big_nohaplotig	CDS	22894808	22895119	100	+	0	ID=FBgn0034694.1.mrna1.cds3;Name=FBgn0034694.1;Parent=FBgn0034694.1.mrna1;Target=FBgn0034694.1 334 645 +
Chr2	stalkie_big_nohaplotig	CDS	22895949	22896686	100	+	0	ID=FBgn0034694.1.mrna1.cds4;Name=FBgn0034694.1;Parent=FBgn0034694.1.mrna1;Target=FBgn0034694.1 646 1383 +
Chr2	stalkie_big_nohaplotig	CDS	22896747	22896922	100	+	0	ID=FBgn0034694.1.mrna1.cds5;Name=FBgn0034694.1;Parent=FBgn0034694.1.mrna1;Target=FBgn0034694.1 1384 1559 +
Chr2	stalkie_big_nohaplotig	CDS	22896993	22897161	100	+	2	ID=FBgn0034694.1.mrna1.cds6;Name=FBgn0034694.1;Parent=FBgn0034694.1.mrna1;Target=FBgn0034694.1 1560 1728 +
Chr2	stalkie_big_nohaplotig	CDS	22897238	22897591	100	+	0	ID=FBgn0034694.1.mrna1.cds7;Name=FBgn0034694.1;Parent=FBgn0034694.1.mrna1;Target=FBgn0034694.1 1729 2082 +
Chr2	stalkie_big_nohaplotig	CDS	22897650	22897775	100	+	0	ID=FBgn0034694.1.mrna1.cds8;Name=FBgn0034694.1;Parent=FBgn0034694.1.mrna1;Target=FBgn0034694.1 2083 2208 +
Chr2	stalkie_big_nohaplotig	mRNA	102142114	102159062	.	-	.	ID=FBgn0038282.2.mrna1;Name=FBgn0038282.2;Parent=FBgn0038282.2.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1521;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	102158996	102159062	100	-	.	ID=FBgn0038282.2.mrna1.exon1;Name=FBgn0038282.2;Parent=FBgn0038282.2.mrna1;Target=FBgn0038282.2 1 67 +
Chr2	stalkie_big_nohaplotig	exon	102153960	102154474	100	-	.	ID=FBgn0038282.2.mrna1.exon2;Name=FBgn0038282.2;Parent=FBgn0038282.2.mrna1;Target=FBgn0038282.2 68 582 +
Chr2	stalkie_big_nohaplotig	exon	102147109	102147331	100	-	.	ID=FBgn0038282.2.mrna1.exon3;Name=FBgn0038282.2;Parent=FBgn0038282.2.mrna1;Target=FBgn0038282.2 583 805 +
Chr2	stalkie_big_nohaplotig	exon	102146921	102147048	100	-	.	ID=FBgn0038282.2.mrna1.exon4;Name=FBgn0038282.2;Parent=FBgn0038282.2.mrna1;Target=FBgn0038282.2 806 933 +
Chr2	stalkie_big_nohaplotig	exon	102146043	102146211	100	-	.	ID=FBgn0038282.2.mrna1.exon5;Name=FBgn0038282.2;Parent=FBgn0038282.2.mrna1;Target=FBgn0038282.2 934 1102 +
Chr2	stalkie_big_nohaplotig	exon	102142114	102142532	100	-	.	ID=FBgn0038282.2.mrna1.exon6;Name=FBgn0038282.2;Parent=FBgn0038282.2.mrna1;Target=FBgn0038282.2 1103 1521 +
Chr2	stalkie_big_nohaplotig	CDS	102158996	102159062	100	-	0	ID=FBgn0038282.2.mrna1.cds1;Name=FBgn0038282.2;Parent=FBgn0038282.2.mrna1;Target=FBgn0038282.2 1 67 +
Chr2	stalkie_big_nohaplotig	CDS	102153960	102154474	100	-	1	ID=FBgn0038282.2.mrna1.cds2;Name=FBgn0038282.2;Parent=FBgn0038282.2.mrna1;Target=FBgn0038282.2 68 582 +
Chr2	stalkie_big_nohaplotig	CDS	102147109	102147331	100	-	0	ID=FBgn0038282.2.mrna1.cds3;Name=FBgn0038282.2;Parent=FBgn0038282.2.mrna1;Target=FBgn0038282.2 583 805 +
Chr2	stalkie_big_nohaplotig	CDS	102146921	102147048	100	-	1	ID=FBgn0038282.2.mrna1.cds4;Name=FBgn0038282.2;Parent=FBgn0038282.2.mrna1;Target=FBgn0038282.2 806 933 +
Chr2	stalkie_big_nohaplotig	CDS	102146043	102146211	100	-	0	ID=FBgn0038282.2.mrna1.cds5;Name=FBgn0038282.2;Parent=FBgn0038282.2.mrna1;Target=FBgn0038282.2 934 1102 +
Chr2	stalkie_big_nohaplotig	CDS	102142114	102142532	100	-	1	ID=FBgn0038282.2.mrna1.cds6;Name=FBgn0038282.2;Parent=FBgn0038282.2.mrna1;Target=FBgn0038282.2 1103 1521 +
ChrX	stalkie_big_nohaplotig	mRNA	36533606	36534154	.	+	.	ID=FBgn0032336.1.mrna1;Name=FBgn0032336.1;Parent=FBgn0032336.1.path1;Dir=sensecoverage=99.5;identity=100.0;matches=385;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	36533606	36533744	100	+	.	ID=FBgn0032336.1.mrna1.exon1;Name=FBgn0032336.1;Parent=FBgn0032336.1.mrna1;Target=FBgn0032336.1 3 141 +
ChrX	stalkie_big_nohaplotig	exon	36533846	36533973	100	+	.	ID=FBgn0032336.1.mrna1.exon2;Name=FBgn0032336.1;Parent=FBgn0032336.1.mrna1;Target=FBgn0032336.1 142 269 +
ChrX	stalkie_big_nohaplotig	exon	36534037	36534154	100	+	.	ID=FBgn0032336.1.mrna1.exon3;Name=FBgn0032336.1;Parent=FBgn0032336.1.mrna1;Target=FBgn0032336.1 270 387 +
ChrX	stalkie_big_nohaplotig	CDS	36533607	36533744	100	+	0	ID=FBgn0032336.1.mrna1.cds1;Name=FBgn0032336.1;Parent=FBgn0032336.1.mrna1;Target=FBgn0032336.1 4 141 +
ChrX	stalkie_big_nohaplotig	CDS	36533846	36533973	100	+	0	ID=FBgn0032336.1.mrna1.cds2;Name=FBgn0032336.1;Parent=FBgn0032336.1.mrna1;Target=FBgn0032336.1 142 269 +
ChrX	stalkie_big_nohaplotig	CDS	36534037	36534154	100	+	2	ID=FBgn0032336.1.mrna1.cds3;Name=FBgn0032336.1;Parent=FBgn0032336.1.mrna1;Target=FBgn0032336.1 270 387 +
ChrX	stalkie_big_nohaplotig	mRNA	36420055	36432752	.	+	.	ID=FBgn0032340.1.mrna1;Name=FBgn0032340.1;Parent=FBgn0032340.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=4034;mismatches=13;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	36420055	36420353	100	+	.	ID=FBgn0032340.1.mrna1.exon1;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 1 299 +
ChrX	stalkie_big_nohaplotig	exon	36420424	36420623	100	+	.	ID=FBgn0032340.1.mrna1.exon2;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 300 499 +
ChrX	stalkie_big_nohaplotig	exon	36420890	36421281	99	+	.	ID=FBgn0032340.1.mrna1.exon3;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 500 891 +
ChrX	stalkie_big_nohaplotig	exon	36421341	36421594	99	+	.	ID=FBgn0032340.1.mrna1.exon4;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 892 1145 +
ChrX	stalkie_big_nohaplotig	exon	36423885	36424813	99	+	.	ID=FBgn0032340.1.mrna1.exon5;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 1146 2074 +
ChrX	stalkie_big_nohaplotig	exon	36424880	36425080	100	+	.	ID=FBgn0032340.1.mrna1.exon6;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 2075 2275 +
ChrX	stalkie_big_nohaplotig	exon	36425739	36425918	100	+	.	ID=FBgn0032340.1.mrna1.exon7;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 2276 2455 +
ChrX	stalkie_big_nohaplotig	exon	36427843	36428109	100	+	.	ID=FBgn0032340.1.mrna1.exon8;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 2456 2722 +
ChrX	stalkie_big_nohaplotig	exon	36428172	36428406	99	+	.	ID=FBgn0032340.1.mrna1.exon9;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 2723 2957 +
ChrX	stalkie_big_nohaplotig	exon	36430169	36430400	100	+	.	ID=FBgn0032340.1.mrna1.exon10;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 2958 3189 +
ChrX	stalkie_big_nohaplotig	exon	36430525	36430690	100	+	.	ID=FBgn0032340.1.mrna1.exon11;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 3190 3355 +
ChrX	stalkie_big_nohaplotig	exon	36430762	36430976	99	+	.	ID=FBgn0032340.1.mrna1.exon12;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 3356 3570 +
ChrX	stalkie_big_nohaplotig	exon	36432213	36432505	100	+	.	ID=FBgn0032340.1.mrna1.exon13;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 3571 3863 +
ChrX	stalkie_big_nohaplotig	exon	36432569	36432752	100	+	.	ID=FBgn0032340.1.mrna1.exon14;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 3864 4047 +
ChrX	stalkie_big_nohaplotig	CDS	36420055	36420353	100	+	0	ID=FBgn0032340.1.mrna1.cds1;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 1 299 +
ChrX	stalkie_big_nohaplotig	CDS	36420424	36420623	100	+	2	ID=FBgn0032340.1.mrna1.cds2;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 300 499 +
ChrX	stalkie_big_nohaplotig	CDS	36420890	36421281	99	+	1	ID=FBgn0032340.1.mrna1.cds3;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 500 891 +
ChrX	stalkie_big_nohaplotig	CDS	36421341	36421594	99	+	0	ID=FBgn0032340.1.mrna1.cds4;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 892 1145 +
ChrX	stalkie_big_nohaplotig	CDS	36423885	36424813	99	+	2	ID=FBgn0032340.1.mrna1.cds5;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 1146 2074 +
ChrX	stalkie_big_nohaplotig	CDS	36424880	36425080	100	+	1	ID=FBgn0032340.1.mrna1.cds6;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 2075 2275 +
ChrX	stalkie_big_nohaplotig	CDS	36425739	36425918	100	+	1	ID=FBgn0032340.1.mrna1.cds7;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 2276 2455 +
ChrX	stalkie_big_nohaplotig	CDS	36427843	36428109	100	+	1	ID=FBgn0032340.1.mrna1.cds8;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 2456 2722 +
ChrX	stalkie_big_nohaplotig	CDS	36428172	36428406	99	+	1	ID=FBgn0032340.1.mrna1.cds9;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 2723 2957 +
ChrX	stalkie_big_nohaplotig	CDS	36430169	36430400	100	+	2	ID=FBgn0032340.1.mrna1.cds10;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 2958 3189 +
ChrX	stalkie_big_nohaplotig	CDS	36430525	36430690	100	+	0	ID=FBgn0032340.1.mrna1.cds11;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 3190 3355 +
ChrX	stalkie_big_nohaplotig	CDS	36430762	36430976	99	+	1	ID=FBgn0032340.1.mrna1.cds12;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 3356 3570 +
ChrX	stalkie_big_nohaplotig	CDS	36432213	36432505	100	+	0	ID=FBgn0032340.1.mrna1.cds13;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 3571 3863 +
ChrX	stalkie_big_nohaplotig	CDS	36432569	36432752	100	+	2	ID=FBgn0032340.1.mrna1.cds14;Name=FBgn0032340.1;Parent=FBgn0032340.1.mrna1;Target=FBgn0032340.1 3864 4047 +
Chr1	stalkie_big_nohaplotig	mRNA	166682456	166686007	.	+	.	ID=FBgn0026433.1.mrna1;Name=FBgn0026433.1;Parent=FBgn0026433.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3081;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	166682456	166682563	100	+	.	ID=FBgn0026433.1.mrna1.exon1;Name=FBgn0026433.1;Parent=FBgn0026433.1.mrna1;Target=FBgn0026433.1 1 108 +
Chr1	stalkie_big_nohaplotig	exon	166682614	166683039	100	+	.	ID=FBgn0026433.1.mrna1.exon2;Name=FBgn0026433.1;Parent=FBgn0026433.1.mrna1;Target=FBgn0026433.1 109 534 +
Chr1	stalkie_big_nohaplotig	exon	166683092	166683559	100	+	.	ID=FBgn0026433.1.mrna1.exon3;Name=FBgn0026433.1;Parent=FBgn0026433.1.mrna1;Target=FBgn0026433.1 535 1002 +
Chr1	stalkie_big_nohaplotig	exon	166683619	166684130	100	+	.	ID=FBgn0026433.1.mrna1.exon4;Name=FBgn0026433.1;Parent=FBgn0026433.1.mrna1;Target=FBgn0026433.1 1003 1514 +
Chr1	stalkie_big_nohaplotig	exon	166684189	166684918	100	+	.	ID=FBgn0026433.1.mrna1.exon5;Name=FBgn0026433.1;Parent=FBgn0026433.1.mrna1;Target=FBgn0026433.1 1515 2244 +
Chr1	stalkie_big_nohaplotig	exon	166684980	166685117	100	+	.	ID=FBgn0026433.1.mrna1.exon6;Name=FBgn0026433.1;Parent=FBgn0026433.1.mrna1;Target=FBgn0026433.1 2245 2382 +
Chr1	stalkie_big_nohaplotig	exon	166685189	166685632	100	+	.	ID=FBgn0026433.1.mrna1.exon7;Name=FBgn0026433.1;Parent=FBgn0026433.1.mrna1;Target=FBgn0026433.1 2383 2826 +
Chr1	stalkie_big_nohaplotig	exon	166685688	166685901	100	+	.	ID=FBgn0026433.1.mrna1.exon8;Name=FBgn0026433.1;Parent=FBgn0026433.1.mrna1;Target=FBgn0026433.1 2827 3040 +
Chr1	stalkie_big_nohaplotig	exon	166685967	166686007	100	+	.	ID=FBgn0026433.1.mrna1.exon9;Name=FBgn0026433.1;Parent=FBgn0026433.1.mrna1;Target=FBgn0026433.1 3041 3081 +
Chr1	stalkie_big_nohaplotig	CDS	166682456	166682563	100	+	0	ID=FBgn0026433.1.mrna1.cds1;Name=FBgn0026433.1;Parent=FBgn0026433.1.mrna1;Target=FBgn0026433.1 1 108 +
Chr1	stalkie_big_nohaplotig	CDS	166682614	166683039	100	+	0	ID=FBgn0026433.1.mrna1.cds2;Name=FBgn0026433.1;Parent=FBgn0026433.1.mrna1;Target=FBgn0026433.1 109 534 +
Chr1	stalkie_big_nohaplotig	CDS	166683092	166683559	100	+	0	ID=FBgn0026433.1.mrna1.cds3;Name=FBgn0026433.1;Parent=FBgn0026433.1.mrna1;Target=FBgn0026433.1 535 1002 +
Chr1	stalkie_big_nohaplotig	CDS	166683619	166684130	100	+	0	ID=FBgn0026433.1.mrna1.cds4;Name=FBgn0026433.1;Parent=FBgn0026433.1.mrna1;Target=FBgn0026433.1 1003 1514 +
Chr1	stalkie_big_nohaplotig	CDS	166684189	166684918	100	+	2	ID=FBgn0026433.1.mrna1.cds5;Name=FBgn0026433.1;Parent=FBgn0026433.1.mrna1;Target=FBgn0026433.1 1515 2244 +
Chr1	stalkie_big_nohaplotig	CDS	166684980	166685117	100	+	0	ID=FBgn0026433.1.mrna1.cds6;Name=FBgn0026433.1;Parent=FBgn0026433.1.mrna1;Target=FBgn0026433.1 2245 2382 +
Chr1	stalkie_big_nohaplotig	CDS	166685189	166685632	100	+	0	ID=FBgn0026433.1.mrna1.cds7;Name=FBgn0026433.1;Parent=FBgn0026433.1.mrna1;Target=FBgn0026433.1 2383 2826 +
Chr1	stalkie_big_nohaplotig	CDS	166685688	166685901	100	+	0	ID=FBgn0026433.1.mrna1.cds8;Name=FBgn0026433.1;Parent=FBgn0026433.1.mrna1;Target=FBgn0026433.1 2827 3040 +
Chr1	stalkie_big_nohaplotig	CDS	166685967	166686007	100	+	1	ID=FBgn0026433.1.mrna1.cds9;Name=FBgn0026433.1;Parent=FBgn0026433.1.mrna1;Target=FBgn0026433.1 3041 3081 +
Chr1	stalkie_big_nohaplotig	mRNA	166733319	166743244	.	+	.	ID=AGAP013003.1.mrna1;Name=AGAP013003.1;Parent=AGAP013003.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2076;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	166733319	166733417	100	+	.	ID=AGAP013003.1.mrna1.exon1;Name=AGAP013003.1;Parent=AGAP013003.1.mrna1;Target=AGAP013003.1 1 99 +
Chr1	stalkie_big_nohaplotig	exon	166733515	166733709	100	+	.	ID=AGAP013003.1.mrna1.exon2;Name=AGAP013003.1;Parent=AGAP013003.1.mrna1;Target=AGAP013003.1 100 294 +
Chr1	stalkie_big_nohaplotig	exon	166733789	166734243	100	+	.	ID=AGAP013003.1.mrna1.exon3;Name=AGAP013003.1;Parent=AGAP013003.1.mrna1;Target=AGAP013003.1 295 749 +
Chr1	stalkie_big_nohaplotig	exon	166734704	166734976	100	+	.	ID=AGAP013003.1.mrna1.exon4;Name=AGAP013003.1;Parent=AGAP013003.1.mrna1;Target=AGAP013003.1 750 1022 +
Chr1	stalkie_big_nohaplotig	exon	166737381	166737771	100	+	.	ID=AGAP013003.1.mrna1.exon5;Name=AGAP013003.1;Parent=AGAP013003.1.mrna1;Target=AGAP013003.1 1023 1413 +
Chr1	stalkie_big_nohaplotig	exon	166742523	166742645	100	+	.	ID=AGAP013003.1.mrna1.exon6;Name=AGAP013003.1;Parent=AGAP013003.1.mrna1;Target=AGAP013003.1 1414 1536 +
Chr1	stalkie_big_nohaplotig	exon	166742705	166743244	100	+	.	ID=AGAP013003.1.mrna1.exon7;Name=AGAP013003.1;Parent=AGAP013003.1.mrna1;Target=AGAP013003.1 1537 2076 +
Chr1	stalkie_big_nohaplotig	CDS	166733319	166733417	100	+	0	ID=AGAP013003.1.mrna1.cds1;Name=AGAP013003.1;Parent=AGAP013003.1.mrna1;Target=AGAP013003.1 1 99 +
Chr1	stalkie_big_nohaplotig	CDS	166733515	166733709	100	+	0	ID=AGAP013003.1.mrna1.cds2;Name=AGAP013003.1;Parent=AGAP013003.1.mrna1;Target=AGAP013003.1 100 294 +
Chr1	stalkie_big_nohaplotig	CDS	166733789	166734243	100	+	0	ID=AGAP013003.1.mrna1.cds3;Name=AGAP013003.1;Parent=AGAP013003.1.mrna1;Target=AGAP013003.1 295 749 +
Chr1	stalkie_big_nohaplotig	CDS	166734704	166734976	100	+	2	ID=AGAP013003.1.mrna1.cds4;Name=AGAP013003.1;Parent=AGAP013003.1.mrna1;Target=AGAP013003.1 750 1022 +
Chr1	stalkie_big_nohaplotig	CDS	166737381	166737771	100	+	2	ID=AGAP013003.1.mrna1.cds5;Name=AGAP013003.1;Parent=AGAP013003.1.mrna1;Target=AGAP013003.1 1023 1413 +
Chr1	stalkie_big_nohaplotig	CDS	166742523	166742645	100	+	0	ID=AGAP013003.1.mrna1.cds6;Name=AGAP013003.1;Parent=AGAP013003.1.mrna1;Target=AGAP013003.1 1414 1536 +
Chr1	stalkie_big_nohaplotig	CDS	166742705	166743244	100	+	0	ID=AGAP013003.1.mrna1.cds7;Name=AGAP013003.1;Parent=AGAP013003.1.mrna1;Target=AGAP013003.1 1537 2076 +
Chr1	stalkie_big_nohaplotig	mRNA	155523416	155524224	.	+	.	ID=FBgn0014032.1.mrna1;Name=FBgn0014032.1;Parent=FBgn0014032.1.path1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=804;mismatches=3;indels=2;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	155523416	155524224	99	+	.	ID=FBgn0014032.1.mrna1.exon1;Name=FBgn0014032.1;Parent=FBgn0014032.1.mrna1;Target=FBgn0014032.1 807 1 .
Chr1	stalkie_big_nohaplotig	CDS	155523418	155523584	98	+	0	ID=FBgn0014032.1.mrna1.cds1;Name=FBgn0014032.1;Parent=FBgn0014032.1.mrna1;Target=FBgn0014032.1 167 3 .
Chr1	stalkie_big_nohaplotig	mRNA	22296665	22315284	.	+	.	ID=FBgn0035539.1.mrna1;Name=FBgn0035539.1;Parent=FBgn0035539.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1551;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	22296665	22297413	100	+	.	ID=FBgn0035539.1.mrna1.exon1;Name=FBgn0035539.1;Parent=FBgn0035539.1.mrna1;Target=FBgn0035539.1 1 749 +
Chr1	stalkie_big_nohaplotig	exon	22311430	22311686	100	+	.	ID=FBgn0035539.1.mrna1.exon2;Name=FBgn0035539.1;Parent=FBgn0035539.1.mrna1;Target=FBgn0035539.1 750 1006 +
Chr1	stalkie_big_nohaplotig	exon	22313463	22313684	100	+	.	ID=FBgn0035539.1.mrna1.exon3;Name=FBgn0035539.1;Parent=FBgn0035539.1.mrna1;Target=FBgn0035539.1 1007 1228 +
Chr1	stalkie_big_nohaplotig	exon	22313754	22313947	100	+	.	ID=FBgn0035539.1.mrna1.exon4;Name=FBgn0035539.1;Parent=FBgn0035539.1.mrna1;Target=FBgn0035539.1 1229 1422 +
Chr1	stalkie_big_nohaplotig	exon	22315156	22315284	100	+	.	ID=FBgn0035539.1.mrna1.exon5;Name=FBgn0035539.1;Parent=FBgn0035539.1.mrna1;Target=FBgn0035539.1 1423 1551 +
Chr1	stalkie_big_nohaplotig	CDS	22296665	22297413	100	+	0	ID=FBgn0035539.1.mrna1.cds1;Name=FBgn0035539.1;Parent=FBgn0035539.1.mrna1;Target=FBgn0035539.1 1 749 +
Chr1	stalkie_big_nohaplotig	CDS	22311430	22311686	100	+	2	ID=FBgn0035539.1.mrna1.cds2;Name=FBgn0035539.1;Parent=FBgn0035539.1.mrna1;Target=FBgn0035539.1 750 1006 +
Chr1	stalkie_big_nohaplotig	CDS	22313463	22313684	100	+	1	ID=FBgn0035539.1.mrna1.cds3;Name=FBgn0035539.1;Parent=FBgn0035539.1.mrna1;Target=FBgn0035539.1 1007 1228 +
Chr1	stalkie_big_nohaplotig	CDS	22313754	22313947	100	+	1	ID=FBgn0035539.1.mrna1.cds4;Name=FBgn0035539.1;Parent=FBgn0035539.1.mrna1;Target=FBgn0035539.1 1229 1422 +
Chr1	stalkie_big_nohaplotig	CDS	22315156	22315284	100	+	0	ID=FBgn0035539.1.mrna1.cds5;Name=FBgn0035539.1;Parent=FBgn0035539.1.mrna1;Target=FBgn0035539.1 1423 1551 +
ChrX	stalkie_big_nohaplotig	mRNA	17451667	17456466	.	+	.	ID=FBgn0085423.1.mrna1;Name=FBgn0085423.1;Parent=FBgn0085423.1.path1;Dir=sensecoverage=5.0;identity=100.0;matches=150;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	17451667	17451783	100	+	.	ID=FBgn0085423.1.mrna1.exon1;Name=FBgn0085423.1;Parent=FBgn0085423.1.mrna1;Target=FBgn0085423.1 2842 2958 +
ChrX	stalkie_big_nohaplotig	exon	17456434	17456466	100	+	.	ID=FBgn0085423.1.mrna1.exon2;Name=FBgn0085423.1;Parent=FBgn0085423.1.mrna1;Target=FBgn0085423.1 2959 2991 +
ChrX	stalkie_big_nohaplotig	CDS	17451667	17451783	100	+	0	ID=FBgn0085423.1.mrna1.cds1;Name=FBgn0085423.1;Parent=FBgn0085423.1.mrna1;Target=FBgn0085423.1 2842 2958 +
ChrX	stalkie_big_nohaplotig	CDS	17456434	17456466	100	+	0	ID=FBgn0085423.1.mrna1.cds2;Name=FBgn0085423.1;Parent=FBgn0085423.1.mrna1;Target=FBgn0085423.1 2959 2991 +
Chr1	stalkie_big_nohaplotig	mRNA	6783713	6797068	.	+	.	ID=FBgn0036727.1.mrna1;Name=FBgn0036727.1;Parent=FBgn0036727.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1562;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	6783713	6783801	100	+	.	ID=FBgn0036727.1.mrna1.exon1;Name=FBgn0036727.1;Parent=FBgn0036727.1.mrna1;Target=FBgn0036727.1 1 89 +
Chr1	stalkie_big_nohaplotig	exon	6791222	6791349	99	+	.	ID=FBgn0036727.1.mrna1.exon2;Name=FBgn0036727.1;Parent=FBgn0036727.1.mrna1;Target=FBgn0036727.1 90 217 +
Chr1	stalkie_big_nohaplotig	exon	6791425	6791829	100	+	.	ID=FBgn0036727.1.mrna1.exon3;Name=FBgn0036727.1;Parent=FBgn0036727.1.mrna1;Target=FBgn0036727.1 218 622 +
Chr1	stalkie_big_nohaplotig	exon	6791909	6791989	100	+	.	ID=FBgn0036727.1.mrna1.exon4;Name=FBgn0036727.1;Parent=FBgn0036727.1.mrna1;Target=FBgn0036727.1 623 703 +
Chr1	stalkie_big_nohaplotig	exon	6794362	6794439	100	+	.	ID=FBgn0036727.1.mrna1.exon5;Name=FBgn0036727.1;Parent=FBgn0036727.1.mrna1;Target=FBgn0036727.1 704 781 +
Chr1	stalkie_big_nohaplotig	exon	6795467	6795622	100	+	.	ID=FBgn0036727.1.mrna1.exon6;Name=FBgn0036727.1;Parent=FBgn0036727.1.mrna1;Target=FBgn0036727.1 782 937 +
Chr1	stalkie_big_nohaplotig	exon	6795775	6796154	100	+	.	ID=FBgn0036727.1.mrna1.exon7;Name=FBgn0036727.1;Parent=FBgn0036727.1.mrna1;Target=FBgn0036727.1 938 1317 +
Chr1	stalkie_big_nohaplotig	exon	6796823	6797068	100	+	.	ID=FBgn0036727.1.mrna1.exon8;Name=FBgn0036727.1;Parent=FBgn0036727.1.mrna1;Target=FBgn0036727.1 1318 1563 +
Chr1	stalkie_big_nohaplotig	CDS	6783713	6783801	100	+	0	ID=FBgn0036727.1.mrna1.cds1;Name=FBgn0036727.1;Parent=FBgn0036727.1.mrna1;Target=FBgn0036727.1 1 89 +
Chr1	stalkie_big_nohaplotig	CDS	6791222	6791349	99	+	2	ID=FBgn0036727.1.mrna1.cds2;Name=FBgn0036727.1;Parent=FBgn0036727.1.mrna1;Target=FBgn0036727.1 90 217 +
Chr1	stalkie_big_nohaplotig	CDS	6791425	6791829	100	+	1	ID=FBgn0036727.1.mrna1.cds3;Name=FBgn0036727.1;Parent=FBgn0036727.1.mrna1;Target=FBgn0036727.1 218 622 +
Chr1	stalkie_big_nohaplotig	CDS	6791909	6791989	100	+	1	ID=FBgn0036727.1.mrna1.cds4;Name=FBgn0036727.1;Parent=FBgn0036727.1.mrna1;Target=FBgn0036727.1 623 703 +
Chr1	stalkie_big_nohaplotig	CDS	6794362	6794439	100	+	1	ID=FBgn0036727.1.mrna1.cds5;Name=FBgn0036727.1;Parent=FBgn0036727.1.mrna1;Target=FBgn0036727.1 704 781 +
Chr1	stalkie_big_nohaplotig	CDS	6795467	6795622	100	+	1	ID=FBgn0036727.1.mrna1.cds6;Name=FBgn0036727.1;Parent=FBgn0036727.1.mrna1;Target=FBgn0036727.1 782 937 +
Chr1	stalkie_big_nohaplotig	CDS	6795775	6796154	100	+	1	ID=FBgn0036727.1.mrna1.cds7;Name=FBgn0036727.1;Parent=FBgn0036727.1.mrna1;Target=FBgn0036727.1 938 1317 +
Chr1	stalkie_big_nohaplotig	CDS	6796823	6797068	100	+	0	ID=FBgn0036727.1.mrna1.cds8;Name=FBgn0036727.1;Parent=FBgn0036727.1.mrna1;Target=FBgn0036727.1 1318 1563 +
Chr2	stalkie_big_nohaplotig	mRNA	91886187	91907209	.	-	.	ID=FBgn0038532.1.mrna1;Name=FBgn0038532.1;Parent=FBgn0038532.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=4422;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	91903439	91907209	100	-	.	ID=FBgn0038532.1.mrna1.exon1;Name=FBgn0038532.1;Parent=FBgn0038532.1.mrna1;Target=FBgn0038532.1 1 3771 +
Chr2	stalkie_big_nohaplotig	exon	91902521	91902640	100	-	.	ID=FBgn0038532.1.mrna1.exon2;Name=FBgn0038532.1;Parent=FBgn0038532.1.mrna1;Target=FBgn0038532.1 3772 3891 +
Chr2	stalkie_big_nohaplotig	exon	91886642	91886902	100	-	.	ID=FBgn0038532.1.mrna1.exon3;Name=FBgn0038532.1;Parent=FBgn0038532.1.mrna1;Target=FBgn0038532.1 3892 4152 +
Chr2	stalkie_big_nohaplotig	exon	91886334	91886528	100	-	.	ID=FBgn0038532.1.mrna1.exon4;Name=FBgn0038532.1;Parent=FBgn0038532.1.mrna1;Target=FBgn0038532.1 4153 4347 +
Chr2	stalkie_big_nohaplotig	exon	91886187	91886261	100	-	.	ID=FBgn0038532.1.mrna1.exon5;Name=FBgn0038532.1;Parent=FBgn0038532.1.mrna1;Target=FBgn0038532.1 4348 4422 +
Chr2	stalkie_big_nohaplotig	CDS	91903439	91907209	100	-	0	ID=FBgn0038532.1.mrna1.cds1;Name=FBgn0038532.1;Parent=FBgn0038532.1.mrna1;Target=FBgn0038532.1 1 3771 +
Chr2	stalkie_big_nohaplotig	CDS	91902521	91902640	100	-	0	ID=FBgn0038532.1.mrna1.cds2;Name=FBgn0038532.1;Parent=FBgn0038532.1.mrna1;Target=FBgn0038532.1 3772 3891 +
Chr2	stalkie_big_nohaplotig	CDS	91886642	91886902	100	-	0	ID=FBgn0038532.1.mrna1.cds3;Name=FBgn0038532.1;Parent=FBgn0038532.1.mrna1;Target=FBgn0038532.1 3892 4152 +
Chr2	stalkie_big_nohaplotig	CDS	91886334	91886528	100	-	0	ID=FBgn0038532.1.mrna1.cds4;Name=FBgn0038532.1;Parent=FBgn0038532.1.mrna1;Target=FBgn0038532.1 4153 4347 +
Chr2	stalkie_big_nohaplotig	CDS	91886187	91886261	100	-	0	ID=FBgn0038532.1.mrna1.cds5;Name=FBgn0038532.1;Parent=FBgn0038532.1.mrna1;Target=FBgn0038532.1 4348 4422 +
Chr1	stalkie_big_nohaplotig	mRNA	144278037	144289047	.	-	.	ID=FBgn0052699.1.mrna1;Name=FBgn0052699.1;Parent=FBgn0052699.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=1682;mismatches=7;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	144288750	144289047	98	-	.	ID=FBgn0052699.1.mrna1.exon1;Name=FBgn0052699.1;Parent=FBgn0052699.1.mrna1;Target=FBgn0052699.1 1 297 +
Chr1	stalkie_big_nohaplotig	exon	144281872	144282017	99	-	.	ID=FBgn0052699.1.mrna1.exon2;Name=FBgn0052699.1;Parent=FBgn0052699.1.mrna1;Target=FBgn0052699.1 298 443 +
Chr1	stalkie_big_nohaplotig	exon	144281562	144281779	100	-	.	ID=FBgn0052699.1.mrna1.exon3;Name=FBgn0052699.1;Parent=FBgn0052699.1.mrna1;Target=FBgn0052699.1 444 661 +
Chr1	stalkie_big_nohaplotig	exon	144280274	144280541	100	-	.	ID=FBgn0052699.1.mrna1.exon4;Name=FBgn0052699.1;Parent=FBgn0052699.1.mrna1;Target=FBgn0052699.1 662 929 +
Chr1	stalkie_big_nohaplotig	exon	144280064	144280201	100	-	.	ID=FBgn0052699.1.mrna1.exon5;Name=FBgn0052699.1;Parent=FBgn0052699.1.mrna1;Target=FBgn0052699.1 930 1067 +
Chr1	stalkie_big_nohaplotig	exon	144279874	144279999	98	-	.	ID=FBgn0052699.1.mrna1.exon6;Name=FBgn0052699.1;Parent=FBgn0052699.1.mrna1;Target=FBgn0052699.1 1068 1193 +
Chr1	stalkie_big_nohaplotig	exon	144279638	144279788	100	-	.	ID=FBgn0052699.1.mrna1.exon7;Name=FBgn0052699.1;Parent=FBgn0052699.1.mrna1;Target=FBgn0052699.1 1194 1344 +
Chr1	stalkie_big_nohaplotig	exon	144279443	144279544	98	-	.	ID=FBgn0052699.1.mrna1.exon8;Name=FBgn0052699.1;Parent=FBgn0052699.1.mrna1;Target=FBgn0052699.1 1345 1446 +
Chr1	stalkie_big_nohaplotig	exon	144279243	144279381	100	-	.	ID=FBgn0052699.1.mrna1.exon9;Name=FBgn0052699.1;Parent=FBgn0052699.1.mrna1;Target=FBgn0052699.1 1447 1585 +
Chr1	stalkie_big_nohaplotig	exon	144278037	144278140	100	-	.	ID=FBgn0052699.1.mrna1.exon10;Name=FBgn0052699.1;Parent=FBgn0052699.1.mrna1;Target=FBgn0052699.1 1586 1689 +
Chr1	stalkie_big_nohaplotig	CDS	144288971	144289046	96	-	0	ID=FBgn0052699.1.mrna1.cds1;Name=FBgn0052699.1;Parent=FBgn0052699.1.mrna1;Target=FBgn0052699.1 2 76 +
Chr1	stalkie_big_nohaplotig	mRNA	144270576	144272200	.	+	.	ID=FBgn0030177.1.mrna1;Name=FBgn0030177.1;Parent=FBgn0030177.1.path1;Dir=sensecoverage=100.0;identity=98.5;matches=1476;mismatches=23;indels=0;unknowns=1
Chr1	stalkie_big_nohaplotig	exon	144270576	144270710	97	+	.	ID=FBgn0030177.1.mrna1.exon1;Name=FBgn0030177.1;Parent=FBgn0030177.1.mrna1;Target=FBgn0030177.1 1 135 +
Chr1	stalkie_big_nohaplotig	exon	144270771	144271817	98	+	.	ID=FBgn0030177.1.mrna1.exon2;Name=FBgn0030177.1;Parent=FBgn0030177.1.mrna1;Target=FBgn0030177.1 136 1182 +
Chr1	stalkie_big_nohaplotig	exon	144271883	144272200	99	+	.	ID=FBgn0030177.1.mrna1.exon3;Name=FBgn0030177.1;Parent=FBgn0030177.1.mrna1;Target=FBgn0030177.1 1183 1500 +
Chr1	stalkie_big_nohaplotig	CDS	144270576	144270710	97	+	0	ID=FBgn0030177.1.mrna1.cds1;Name=FBgn0030177.1;Parent=FBgn0030177.1.mrna1;Target=FBgn0030177.1 1 135 +
Chr1	stalkie_big_nohaplotig	CDS	144270771	144271817	98	+	0	ID=FBgn0030177.1.mrna1.cds2;Name=FBgn0030177.1;Parent=FBgn0030177.1.mrna1;Target=FBgn0030177.1 136 1182 +
Chr1	stalkie_big_nohaplotig	CDS	144271883	144272200	99	+	0	ID=FBgn0030177.1.mrna1.cds3;Name=FBgn0030177.1;Parent=FBgn0030177.1.mrna1;Target=FBgn0030177.1 1183 1500 +
Chr2	stalkie_big_nohaplotig	mRNA	53057957	53063763	.	+	.	ID=FBgn0013305.1.mrna1;Name=FBgn0013305.1;Parent=FBgn0013305.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=729;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	53057957	53058002	100	+	.	ID=FBgn0013305.1.mrna1.exon1;Name=FBgn0013305.1;Parent=FBgn0013305.1.mrna1;Target=FBgn0013305.1 1 46 +
Chr2	stalkie_big_nohaplotig	exon	53061096	53061262	100	+	.	ID=FBgn0013305.1.mrna1.exon2;Name=FBgn0013305.1;Parent=FBgn0013305.1.mrna1;Target=FBgn0013305.1 47 213 +
Chr2	stalkie_big_nohaplotig	exon	53061326	53061574	100	+	.	ID=FBgn0013305.1.mrna1.exon3;Name=FBgn0013305.1;Parent=FBgn0013305.1.mrna1;Target=FBgn0013305.1 214 462 +
Chr2	stalkie_big_nohaplotig	exon	53063497	53063763	100	+	.	ID=FBgn0013305.1.mrna1.exon4;Name=FBgn0013305.1;Parent=FBgn0013305.1.mrna1;Target=FBgn0013305.1 463 729 +
Chr2	stalkie_big_nohaplotig	CDS	53057957	53058002	100	+	0	ID=FBgn0013305.1.mrna1.cds1;Name=FBgn0013305.1;Parent=FBgn0013305.1.mrna1;Target=FBgn0013305.1 1 46 +
Chr2	stalkie_big_nohaplotig	CDS	53061096	53061262	100	+	1	ID=FBgn0013305.1.mrna1.cds2;Name=FBgn0013305.1;Parent=FBgn0013305.1.mrna1;Target=FBgn0013305.1 47 213 +
Chr2	stalkie_big_nohaplotig	CDS	53061326	53061574	100	+	0	ID=FBgn0013305.1.mrna1.cds3;Name=FBgn0013305.1;Parent=FBgn0013305.1.mrna1;Target=FBgn0013305.1 214 462 +
Chr2	stalkie_big_nohaplotig	CDS	53063497	53063763	100	+	0	ID=FBgn0013305.1.mrna1.cds4;Name=FBgn0013305.1;Parent=FBgn0013305.1.mrna1;Target=FBgn0013305.1 463 729 +
ChrX	stalkie_big_nohaplotig	mRNA	36818308	36819322	.	-	.	ID=FBgn0032259.1.mrna1;Name=FBgn0032259.1;Parent=FBgn0032259.1.path1;Dir=sensecoverage=99.8;identity=99.9;matches=876;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	36819157	36819322	100	-	.	ID=FBgn0032259.1.mrna1.exon1;Name=FBgn0032259.1;Parent=FBgn0032259.1.mrna1;Target=FBgn0032259.1 3 168 +
ChrX	stalkie_big_nohaplotig	exon	36818867	36819080	100	-	.	ID=FBgn0032259.1.mrna1.exon2;Name=FBgn0032259.1;Parent=FBgn0032259.1.mrna1;Target=FBgn0032259.1 169 382 +
ChrX	stalkie_big_nohaplotig	exon	36818308	36818804	99	-	.	ID=FBgn0032259.1.mrna1.exon3;Name=FBgn0032259.1;Parent=FBgn0032259.1.mrna1;Target=FBgn0032259.1 383 879 +
ChrX	stalkie_big_nohaplotig	CDS	36819157	36819321	100	-	0	ID=FBgn0032259.1.mrna1.cds1;Name=FBgn0032259.1;Parent=FBgn0032259.1.mrna1;Target=FBgn0032259.1 4 168 +
ChrX	stalkie_big_nohaplotig	CDS	36818867	36819080	100	-	0	ID=FBgn0032259.1.mrna1.cds2;Name=FBgn0032259.1;Parent=FBgn0032259.1.mrna1;Target=FBgn0032259.1 169 382 +
ChrX	stalkie_big_nohaplotig	CDS	36818308	36818804	99	-	1	ID=FBgn0032259.1.mrna1.cds3;Name=FBgn0032259.1;Parent=FBgn0032259.1.mrna1;Target=FBgn0032259.1 383 879 +
Chr1	stalkie_big_nohaplotig	mRNA	65873838	65881675	.	-	.	ID=FBgn0024806.1.mrna1;Name=FBgn0024806.1;Parent=FBgn0024806.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=5175;mismatches=6;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	65881546	65881675	100	-	.	ID=FBgn0024806.1.mrna1.exon1;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 1 130 +
Chr1	stalkie_big_nohaplotig	exon	65880903	65880977	98	-	.	ID=FBgn0024806.1.mrna1.exon2;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 131 205 +
Chr1	stalkie_big_nohaplotig	exon	65880499	65880795	100	-	.	ID=FBgn0024806.1.mrna1.exon3;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 206 502 +
Chr1	stalkie_big_nohaplotig	exon	65880317	65880442	100	-	.	ID=FBgn0024806.1.mrna1.exon4;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 503 628 +
Chr1	stalkie_big_nohaplotig	exon	65880064	65880257	99	-	.	ID=FBgn0024806.1.mrna1.exon5;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 629 822 +
Chr1	stalkie_big_nohaplotig	exon	65879919	65880012	100	-	.	ID=FBgn0024806.1.mrna1.exon6;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 823 916 +
Chr1	stalkie_big_nohaplotig	exon	65879230	65879782	100	-	.	ID=FBgn0024806.1.mrna1.exon7;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 917 1469 +
Chr1	stalkie_big_nohaplotig	exon	65878741	65879078	100	-	.	ID=FBgn0024806.1.mrna1.exon8;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 1470 1807 +
Chr1	stalkie_big_nohaplotig	exon	65877366	65878673	99	-	.	ID=FBgn0024806.1.mrna1.exon9;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 1808 3115 +
Chr1	stalkie_big_nohaplotig	exon	65876548	65876705	100	-	.	ID=FBgn0024806.1.mrna1.exon10;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 3116 3273 +
Chr1	stalkie_big_nohaplotig	exon	65876387	65876468	100	-	.	ID=FBgn0024806.1.mrna1.exon11;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 3274 3355 +
Chr1	stalkie_big_nohaplotig	exon	65876215	65876319	99	-	.	ID=FBgn0024806.1.mrna1.exon12;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 3356 3460 +
Chr1	stalkie_big_nohaplotig	exon	65875778	65876147	100	-	.	ID=FBgn0024806.1.mrna1.exon13;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 3461 3830 +
Chr1	stalkie_big_nohaplotig	exon	65875044	65875704	99	-	.	ID=FBgn0024806.1.mrna1.exon14;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 3831 4491 +
Chr1	stalkie_big_nohaplotig	exon	65874229	65874668	100	-	.	ID=FBgn0024806.1.mrna1.exon15;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 4492 4931 +
Chr1	stalkie_big_nohaplotig	exon	65874005	65874153	100	-	.	ID=FBgn0024806.1.mrna1.exon16;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 4932 5080 +
Chr1	stalkie_big_nohaplotig	exon	65873838	65873938	100	-	.	ID=FBgn0024806.1.mrna1.exon17;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 5081 5181 +
Chr1	stalkie_big_nohaplotig	CDS	65881546	65881675	100	-	0	ID=FBgn0024806.1.mrna1.cds1;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 1 130 +
Chr1	stalkie_big_nohaplotig	CDS	65880903	65880977	98	-	1	ID=FBgn0024806.1.mrna1.cds2;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 131 205 +
Chr1	stalkie_big_nohaplotig	CDS	65880499	65880795	100	-	1	ID=FBgn0024806.1.mrna1.cds3;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 206 502 +
Chr1	stalkie_big_nohaplotig	CDS	65880317	65880442	100	-	1	ID=FBgn0024806.1.mrna1.cds4;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 503 628 +
Chr1	stalkie_big_nohaplotig	CDS	65880064	65880257	99	-	1	ID=FBgn0024806.1.mrna1.cds5;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 629 822 +
Chr1	stalkie_big_nohaplotig	CDS	65879919	65880012	100	-	0	ID=FBgn0024806.1.mrna1.cds6;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 823 916 +
Chr1	stalkie_big_nohaplotig	CDS	65879230	65879782	100	-	1	ID=FBgn0024806.1.mrna1.cds7;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 917 1469 +
Chr1	stalkie_big_nohaplotig	CDS	65878741	65879078	100	-	2	ID=FBgn0024806.1.mrna1.cds8;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 1470 1807 +
Chr1	stalkie_big_nohaplotig	CDS	65877366	65878673	99	-	1	ID=FBgn0024806.1.mrna1.cds9;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 1808 3115 +
Chr1	stalkie_big_nohaplotig	CDS	65876548	65876705	100	-	1	ID=FBgn0024806.1.mrna1.cds10;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 3116 3273 +
Chr1	stalkie_big_nohaplotig	CDS	65876387	65876468	100	-	0	ID=FBgn0024806.1.mrna1.cds11;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 3274 3355 +
Chr1	stalkie_big_nohaplotig	CDS	65876215	65876319	99	-	1	ID=FBgn0024806.1.mrna1.cds12;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 3356 3460 +
Chr1	stalkie_big_nohaplotig	CDS	65875778	65876147	100	-	1	ID=FBgn0024806.1.mrna1.cds13;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 3461 3830 +
Chr1	stalkie_big_nohaplotig	CDS	65875044	65875704	99	-	2	ID=FBgn0024806.1.mrna1.cds14;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 3831 4491 +
Chr1	stalkie_big_nohaplotig	CDS	65874229	65874668	100	-	0	ID=FBgn0024806.1.mrna1.cds15;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 4492 4931 +
Chr1	stalkie_big_nohaplotig	CDS	65874005	65874153	100	-	2	ID=FBgn0024806.1.mrna1.cds16;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 4932 5080 +
Chr1	stalkie_big_nohaplotig	CDS	65873838	65873938	100	-	1	ID=FBgn0024806.1.mrna1.cds17;Name=FBgn0024806.1;Parent=FBgn0024806.1.mrna1;Target=FBgn0024806.1 5081 5181 +
ChrX	stalkie_big_nohaplotig	mRNA	64287072	64290902	.	-	.	ID=FBgn0046706.1.mrna1;Name=FBgn0046706.1;Parent=FBgn0046706.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=2313;mismatches=6;indels=6;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	64290805	64290902	98	-	.	ID=FBgn0046706.1.mrna1.exon1;Name=FBgn0046706.1;Parent=FBgn0046706.1.mrna1;Target=FBgn0046706.1 1 98 +
ChrX	stalkie_big_nohaplotig	exon	64290425	64290744	99	-	.	ID=FBgn0046706.1.mrna1.exon2;Name=FBgn0046706.1;Parent=FBgn0046706.1.mrna1;Target=FBgn0046706.1 99 418 +
ChrX	stalkie_big_nohaplotig	exon	64290090	64290362	100	-	.	ID=FBgn0046706.1.mrna1.exon3;Name=FBgn0046706.1;Parent=FBgn0046706.1.mrna1;Target=FBgn0046706.1 419 691 +
ChrX	stalkie_big_nohaplotig	exon	64289560	64290021	100	-	.	ID=FBgn0046706.1.mrna1.exon4;Name=FBgn0046706.1;Parent=FBgn0046706.1.mrna1;Target=FBgn0046706.1 692 1153 +
ChrX	stalkie_big_nohaplotig	exon	64289025	64289488	98	-	.	ID=FBgn0046706.1.mrna1.exon5;Name=FBgn0046706.1;Parent=FBgn0046706.1.mrna1;Target=FBgn0046706.1 1154 1623 +
ChrX	stalkie_big_nohaplotig	exon	64288765	64288968	100	-	.	ID=FBgn0046706.1.mrna1.exon6;Name=FBgn0046706.1;Parent=FBgn0046706.1.mrna1;Target=FBgn0046706.1 1624 1827 +
ChrX	stalkie_big_nohaplotig	exon	64287354	64287649	100	-	.	ID=FBgn0046706.1.mrna1.exon7;Name=FBgn0046706.1;Parent=FBgn0046706.1.mrna1;Target=FBgn0046706.1 1828 2123 +
ChrX	stalkie_big_nohaplotig	exon	64287072	64287273	99	-	.	ID=FBgn0046706.1.mrna1.exon8;Name=FBgn0046706.1;Parent=FBgn0046706.1.mrna1;Target=FBgn0046706.1 2124 2325 +
ChrX	stalkie_big_nohaplotig	CDS	64290805	64290902	98	-	0	ID=FBgn0046706.1.mrna1.cds1;Name=FBgn0046706.1;Parent=FBgn0046706.1.mrna1;Target=FBgn0046706.1 1 98 +
ChrX	stalkie_big_nohaplotig	CDS	64290425	64290744	99	-	2	ID=FBgn0046706.1.mrna1.cds2;Name=FBgn0046706.1;Parent=FBgn0046706.1.mrna1;Target=FBgn0046706.1 99 418 +
ChrX	stalkie_big_nohaplotig	CDS	64290090	64290362	100	-	1	ID=FBgn0046706.1.mrna1.cds3;Name=FBgn0046706.1;Parent=FBgn0046706.1.mrna1;Target=FBgn0046706.1 419 691 +
ChrX	stalkie_big_nohaplotig	CDS	64289560	64290021	100	-	1	ID=FBgn0046706.1.mrna1.cds4;Name=FBgn0046706.1;Parent=FBgn0046706.1.mrna1;Target=FBgn0046706.1 692 1153 +
ChrX	stalkie_big_nohaplotig	CDS	64289025	64289488	98	-	1	ID=FBgn0046706.1.mrna1.cds5;Name=FBgn0046706.1;Parent=FBgn0046706.1.mrna1;Target=FBgn0046706.1 1154 1623 +
ChrX	stalkie_big_nohaplotig	CDS	64288765	64288968	100	-	0	ID=FBgn0046706.1.mrna1.cds6;Name=FBgn0046706.1;Parent=FBgn0046706.1.mrna1;Target=FBgn0046706.1 1624 1827 +
ChrX	stalkie_big_nohaplotig	CDS	64287354	64287649	100	-	0	ID=FBgn0046706.1.mrna1.cds7;Name=FBgn0046706.1;Parent=FBgn0046706.1.mrna1;Target=FBgn0046706.1 1828 2123 +
ChrX	stalkie_big_nohaplotig	CDS	64287072	64287273	99	-	2	ID=FBgn0046706.1.mrna1.cds8;Name=FBgn0046706.1;Parent=FBgn0046706.1.mrna1;Target=FBgn0046706.1 2124 2325 +
Chr2	stalkie_big_nohaplotig	mRNA	144893853	144895768	.	-	.	ID=FBgn0051038.1.mrna1;Name=FBgn0051038.1;Parent=FBgn0051038.1.path1;Dir=indeterminatecoverage=69.0;identity=99.8;matches=1912;mismatches=4;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	144893853	144895768	99	-	.	ID=FBgn0051038.1.mrna1.exon1;Name=FBgn0051038.1;Parent=FBgn0051038.1.mrna1;Target=FBgn0051038.1 1916 1 .
Chr2	stalkie_big_nohaplotig	CDS	144893855	144895768	99	-	0	ID=FBgn0051038.1.mrna1.cds1;Name=FBgn0051038.1;Parent=FBgn0051038.1.mrna1;Target=FBgn0051038.1 1914 1 .
ChrX	stalkie_big_nohaplotig	mRNA	19517852	19537531	.	+	.	ID=FBgn0011230.1.mrna1;Name=FBgn0011230.1;Parent=FBgn0011230.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=16141;mismatches=5;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	19517852	19518051	100	+	.	ID=FBgn0011230.1.mrna1.exon1;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 1 200 +
ChrX	stalkie_big_nohaplotig	exon	19518207	19518301	100	+	.	ID=FBgn0011230.1.mrna1.exon2;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 201 295 +
ChrX	stalkie_big_nohaplotig	exon	19518428	19518855	100	+	.	ID=FBgn0011230.1.mrna1.exon3;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 296 723 +
ChrX	stalkie_big_nohaplotig	exon	19520551	19522687	100	+	.	ID=FBgn0011230.1.mrna1.exon4;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 724 2860 +
ChrX	stalkie_big_nohaplotig	exon	19522750	19523256	100	+	.	ID=FBgn0011230.1.mrna1.exon5;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 2861 3367 +
ChrX	stalkie_big_nohaplotig	exon	19524216	19530255	99	+	.	ID=FBgn0011230.1.mrna1.exon6;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 3368 9407 +
ChrX	stalkie_big_nohaplotig	exon	19530315	19530519	100	+	.	ID=FBgn0011230.1.mrna1.exon7;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 9408 9612 +
ChrX	stalkie_big_nohaplotig	exon	19530591	19531295	100	+	.	ID=FBgn0011230.1.mrna1.exon8;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 9613 10317 +
ChrX	stalkie_big_nohaplotig	exon	19531358	19533033	100	+	.	ID=FBgn0011230.1.mrna1.exon9;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 10318 11993 +
ChrX	stalkie_big_nohaplotig	exon	19533158	19533637	100	+	.	ID=FBgn0011230.1.mrna1.exon10;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 11994 12473 +
ChrX	stalkie_big_nohaplotig	exon	19533699	19535700	99	+	.	ID=FBgn0011230.1.mrna1.exon11;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 12474 14475 +
ChrX	stalkie_big_nohaplotig	exon	19535777	19537373	100	+	.	ID=FBgn0011230.1.mrna1.exon12;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 14476 16072 +
ChrX	stalkie_big_nohaplotig	exon	19537458	19537531	100	+	.	ID=FBgn0011230.1.mrna1.exon13;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 16073 16146 +
ChrX	stalkie_big_nohaplotig	CDS	19517852	19518051	100	+	0	ID=FBgn0011230.1.mrna1.cds1;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 1 200 +
ChrX	stalkie_big_nohaplotig	CDS	19518207	19518301	100	+	2	ID=FBgn0011230.1.mrna1.cds2;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 201 295 +
ChrX	stalkie_big_nohaplotig	CDS	19518428	19518855	100	+	1	ID=FBgn0011230.1.mrna1.cds3;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 296 723 +
ChrX	stalkie_big_nohaplotig	CDS	19520551	19522687	100	+	0	ID=FBgn0011230.1.mrna1.cds4;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 724 2860 +
ChrX	stalkie_big_nohaplotig	CDS	19522750	19523256	100	+	1	ID=FBgn0011230.1.mrna1.cds5;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 2861 3367 +
ChrX	stalkie_big_nohaplotig	CDS	19524216	19530255	99	+	1	ID=FBgn0011230.1.mrna1.cds6;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 3368 9407 +
ChrX	stalkie_big_nohaplotig	CDS	19530315	19530519	100	+	2	ID=FBgn0011230.1.mrna1.cds7;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 9408 9612 +
ChrX	stalkie_big_nohaplotig	CDS	19530591	19531295	100	+	0	ID=FBgn0011230.1.mrna1.cds8;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 9613 10317 +
ChrX	stalkie_big_nohaplotig	CDS	19531358	19533033	100	+	0	ID=FBgn0011230.1.mrna1.cds9;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 10318 11993 +
ChrX	stalkie_big_nohaplotig	CDS	19533158	19533637	100	+	2	ID=FBgn0011230.1.mrna1.cds10;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 11994 12473 +
ChrX	stalkie_big_nohaplotig	CDS	19533699	19535700	99	+	2	ID=FBgn0011230.1.mrna1.cds11;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 12474 14475 +
ChrX	stalkie_big_nohaplotig	CDS	19535777	19537373	100	+	0	ID=FBgn0011230.1.mrna1.cds12;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 14476 16072 +
ChrX	stalkie_big_nohaplotig	CDS	19537458	19537531	100	+	1	ID=FBgn0011230.1.mrna1.cds13;Name=FBgn0011230.1;Parent=FBgn0011230.1.mrna1;Target=FBgn0011230.1 16073 16146 +
ChrX	stalkie_big_nohaplotig	mRNA	71869061	71887739	.	-	.	ID=FBgn0031879.1.mrna1;Name=FBgn0031879.1;Parent=FBgn0031879.1.path1;Dir=sensecoverage=98.7;identity=100.0;matches=10628;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	71887658	71887739	100	-	.	ID=FBgn0031879.1.mrna1.exon1;Name=FBgn0031879.1;Parent=FBgn0031879.1.mrna1;Target=FBgn0031879.1 140 221 +
ChrX	stalkie_big_nohaplotig	exon	71879748	71881178	100	-	.	ID=FBgn0031879.1.mrna1.exon2;Name=FBgn0031879.1;Parent=FBgn0031879.1.mrna1;Target=FBgn0031879.1 222 1652 +
ChrX	stalkie_big_nohaplotig	exon	71879476	71879678	100	-	.	ID=FBgn0031879.1.mrna1.exon3;Name=FBgn0031879.1;Parent=FBgn0031879.1.mrna1;Target=FBgn0031879.1 1653 1855 +
ChrX	stalkie_big_nohaplotig	exon	71877920	71879410	100	-	.	ID=FBgn0031879.1.mrna1.exon4;Name=FBgn0031879.1;Parent=FBgn0031879.1.mrna1;Target=FBgn0031879.1 1856 3346 +
ChrX	stalkie_big_nohaplotig	exon	71872537	71877855	100	-	.	ID=FBgn0031879.1.mrna1.exon5;Name=FBgn0031879.1;Parent=FBgn0031879.1.mrna1;Target=FBgn0031879.1 3347 8665 +
ChrX	stalkie_big_nohaplotig	exon	71872243	71872455	100	-	.	ID=FBgn0031879.1.mrna1.exon6;Name=FBgn0031879.1;Parent=FBgn0031879.1.mrna1;Target=FBgn0031879.1 8666 8878 +
ChrX	stalkie_big_nohaplotig	exon	71871976	71872138	100	-	.	ID=FBgn0031879.1.mrna1.exon7;Name=FBgn0031879.1;Parent=FBgn0031879.1.mrna1;Target=FBgn0031879.1 8879 9041 +
ChrX	stalkie_big_nohaplotig	exon	71871820	71871915	100	-	.	ID=FBgn0031879.1.mrna1.exon8;Name=FBgn0031879.1;Parent=FBgn0031879.1.mrna1;Target=FBgn0031879.1 9042 9137 +
ChrX	stalkie_big_nohaplotig	exon	71871539	71871658	100	-	.	ID=FBgn0031879.1.mrna1.exon9;Name=FBgn0031879.1;Parent=FBgn0031879.1.mrna1;Target=FBgn0031879.1 9138 9257 +
ChrX	stalkie_big_nohaplotig	exon	71870067	71871454	100	-	.	ID=FBgn0031879.1.mrna1.exon10;Name=FBgn0031879.1;Parent=FBgn0031879.1.mrna1;Target=FBgn0031879.1 9258 10645 +
ChrX	stalkie_big_nohaplotig	exon	71869061	71869182	100	-	.	ID=FBgn0031879.1.mrna1.exon11;Name=FBgn0031879.1;Parent=FBgn0031879.1.mrna1;Target=FBgn0031879.1 10646 10767 +
ChrX	stalkie_big_nohaplotig	CDS	71887658	71887737	100	-	0	ID=FBgn0031879.1.mrna1.cds1;Name=FBgn0031879.1;Parent=FBgn0031879.1.mrna1;Target=FBgn0031879.1 142 221 +
ChrX	stalkie_big_nohaplotig	CDS	71879748	71881178	100	-	2	ID=FBgn0031879.1.mrna1.cds2;Name=FBgn0031879.1;Parent=FBgn0031879.1.mrna1;Target=FBgn0031879.1 222 1652 +
ChrX	stalkie_big_nohaplotig	CDS	71879476	71879678	100	-	2	ID=FBgn0031879.1.mrna1.cds3;Name=FBgn0031879.1;Parent=FBgn0031879.1.mrna1;Target=FBgn0031879.1 1653 1855 +
ChrX	stalkie_big_nohaplotig	CDS	71877920	71879410	100	-	1	ID=FBgn0031879.1.mrna1.cds4;Name=FBgn0031879.1;Parent=FBgn0031879.1.mrna1;Target=FBgn0031879.1 1856 3346 +
ChrX	stalkie_big_nohaplotig	CDS	71872537	71877855	100	-	1	ID=FBgn0031879.1.mrna1.cds5;Name=FBgn0031879.1;Parent=FBgn0031879.1.mrna1;Target=FBgn0031879.1 3347 8665 +
ChrX	stalkie_big_nohaplotig	CDS	71872243	71872455	100	-	1	ID=FBgn0031879.1.mrna1.cds6;Name=FBgn0031879.1;Parent=FBgn0031879.1.mrna1;Target=FBgn0031879.1 8666 8878 +
ChrX	stalkie_big_nohaplotig	CDS	71871976	71872138	100	-	1	ID=FBgn0031879.1.mrna1.cds7;Name=FBgn0031879.1;Parent=FBgn0031879.1.mrna1;Target=FBgn0031879.1 8879 9041 +
ChrX	stalkie_big_nohaplotig	CDS	71871820	71871915	100	-	2	ID=FBgn0031879.1.mrna1.cds8;Name=FBgn0031879.1;Parent=FBgn0031879.1.mrna1;Target=FBgn0031879.1 9042 9137 +
ChrX	stalkie_big_nohaplotig	CDS	71871539	71871658	100	-	2	ID=FBgn0031879.1.mrna1.cds9;Name=FBgn0031879.1;Parent=FBgn0031879.1.mrna1;Target=FBgn0031879.1 9138 9257 +
ChrX	stalkie_big_nohaplotig	CDS	71870067	71871454	100	-	2	ID=FBgn0031879.1.mrna1.cds10;Name=FBgn0031879.1;Parent=FBgn0031879.1.mrna1;Target=FBgn0031879.1 9258 10645 +
ChrX	stalkie_big_nohaplotig	CDS	71869061	71869182	100	-	1	ID=FBgn0031879.1.mrna1.cds11;Name=FBgn0031879.1;Parent=FBgn0031879.1.mrna1;Target=FBgn0031879.1 10646 10767 +
ChrX	stalkie_big_nohaplotig	mRNA	72038943	72040273	.	+	.	ID=FBgn0027949.1.mrna1;Name=FBgn0027949.1;Parent=FBgn0027949.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1160;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	72038943	72039131	99	+	.	ID=FBgn0027949.1.mrna1.exon1;Name=FBgn0027949.1;Parent=FBgn0027949.1.mrna1;Target=FBgn0027949.1 1 189 +
ChrX	stalkie_big_nohaplotig	exon	72039302	72040273	100	+	.	ID=FBgn0027949.1.mrna1.exon2;Name=FBgn0027949.1;Parent=FBgn0027949.1.mrna1;Target=FBgn0027949.1 190 1161 +
ChrX	stalkie_big_nohaplotig	CDS	72038943	72039131	99	+	0	ID=FBgn0027949.1.mrna1.cds1;Name=FBgn0027949.1;Parent=FBgn0027949.1.mrna1;Target=FBgn0027949.1 1 189 +
ChrX	stalkie_big_nohaplotig	CDS	72039302	72040273	100	+	0	ID=FBgn0027949.1.mrna1.cds2;Name=FBgn0027949.1;Parent=FBgn0027949.1.mrna1;Target=FBgn0027949.1 190 1161 +
ChrX	stalkie_big_nohaplotig	mRNA	71853274	71858363	.	+	.	ID=FBgn0032233.mrna1;Name=FBgn0032233;Parent=FBgn0032233.path1;Dir=sensecoverage=100.0;identity=99.6;matches=502;mismatches=2;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	71853274	71853286	100	+	.	ID=FBgn0032233.mrna1.exon1;Name=FBgn0032233;Parent=FBgn0032233.mrna1;Target=FBgn0032233 1 13 +
ChrX	stalkie_big_nohaplotig	exon	71854601	71854702	100	+	.	ID=FBgn0032233.mrna1.exon2;Name=FBgn0032233;Parent=FBgn0032233.mrna1;Target=FBgn0032233 14 115 +
ChrX	stalkie_big_nohaplotig	exon	71856551	71856696	99	+	.	ID=FBgn0032233.mrna1.exon3;Name=FBgn0032233;Parent=FBgn0032233.mrna1;Target=FBgn0032233 116 261 +
ChrX	stalkie_big_nohaplotig	exon	71857372	71857582	99	+	.	ID=FBgn0032233.mrna1.exon4;Name=FBgn0032233;Parent=FBgn0032233.mrna1;Target=FBgn0032233 262 472 +
ChrX	stalkie_big_nohaplotig	exon	71858332	71858363	100	+	.	ID=FBgn0032233.mrna1.exon5;Name=FBgn0032233;Parent=FBgn0032233.mrna1;Target=FBgn0032233 473 504 +
ChrX	stalkie_big_nohaplotig	CDS	71853274	71853286	100	+	0	ID=FBgn0032233.mrna1.cds1;Name=FBgn0032233;Parent=FBgn0032233.mrna1;Target=FBgn0032233 1 13 +
ChrX	stalkie_big_nohaplotig	CDS	71854601	71854702	100	+	1	ID=FBgn0032233.mrna1.cds2;Name=FBgn0032233;Parent=FBgn0032233.mrna1;Target=FBgn0032233 14 115 +
ChrX	stalkie_big_nohaplotig	CDS	71856551	71856696	99	+	1	ID=FBgn0032233.mrna1.cds3;Name=FBgn0032233;Parent=FBgn0032233.mrna1;Target=FBgn0032233 116 261 +
ChrX	stalkie_big_nohaplotig	CDS	71857372	71857582	99	+	0	ID=FBgn0032233.mrna1.cds4;Name=FBgn0032233;Parent=FBgn0032233.mrna1;Target=FBgn0032233 262 472 +
ChrX	stalkie_big_nohaplotig	CDS	71858332	71858363	100	+	1	ID=FBgn0032233.mrna1.cds5;Name=FBgn0032233;Parent=FBgn0032233.mrna1;Target=FBgn0032233 473 504 +
ChrX	stalkie_big_nohaplotig	mRNA	71823370	71830864	.	-	.	ID=FBgn0011703.2.mrna1;Name=FBgn0011703.2;Parent=FBgn0011703.2.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2412;mismatches=6;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	71830825	71830864	100	-	.	ID=FBgn0011703.2.mrna1.exon1;Name=FBgn0011703.2;Parent=FBgn0011703.2.mrna1;Target=FBgn0011703.2 1 40 +
ChrX	stalkie_big_nohaplotig	exon	71830684	71830772	100	-	.	ID=FBgn0011703.2.mrna1.exon2;Name=FBgn0011703.2;Parent=FBgn0011703.2.mrna1;Target=FBgn0011703.2 41 129 +
ChrX	stalkie_big_nohaplotig	exon	71826849	71827026	100	-	.	ID=FBgn0011703.2.mrna1.exon3;Name=FBgn0011703.2;Parent=FBgn0011703.2.mrna1;Target=FBgn0011703.2 130 307 +
ChrX	stalkie_big_nohaplotig	exon	71823370	71825480	99	-	.	ID=FBgn0011703.2.mrna1.exon4;Name=FBgn0011703.2;Parent=FBgn0011703.2.mrna1;Target=FBgn0011703.2 308 2418 +
ChrX	stalkie_big_nohaplotig	CDS	71830825	71830864	100	-	0	ID=FBgn0011703.2.mrna1.cds1;Name=FBgn0011703.2;Parent=FBgn0011703.2.mrna1;Target=FBgn0011703.2 1 40 +
ChrX	stalkie_big_nohaplotig	CDS	71830684	71830772	100	-	1	ID=FBgn0011703.2.mrna1.cds2;Name=FBgn0011703.2;Parent=FBgn0011703.2.mrna1;Target=FBgn0011703.2 41 129 +
ChrX	stalkie_big_nohaplotig	CDS	71826849	71827026	100	-	0	ID=FBgn0011703.2.mrna1.cds3;Name=FBgn0011703.2;Parent=FBgn0011703.2.mrna1;Target=FBgn0011703.2 130 307 +
ChrX	stalkie_big_nohaplotig	CDS	71823370	71825480	99	-	1	ID=FBgn0011703.2.mrna1.cds4;Name=FBgn0011703.2;Parent=FBgn0011703.2.mrna1;Target=FBgn0011703.2 308 2418 +
ChrX	stalkie_big_nohaplotig	mRNA	71819071	71821816	.	+	.	ID=FBgn0032205.1.mrna1;Name=FBgn0032205.1;Parent=FBgn0032205.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=869;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	71819071	71819561	99	+	.	ID=FBgn0032205.1.mrna1.exon1;Name=FBgn0032205.1;Parent=FBgn0032205.1.mrna1;Target=FBgn0032205.1 1 491 +
ChrX	stalkie_big_nohaplotig	exon	71821313	71821487	100	+	.	ID=FBgn0032205.1.mrna1.exon2;Name=FBgn0032205.1;Parent=FBgn0032205.1.mrna1;Target=FBgn0032205.1 492 666 +
ChrX	stalkie_big_nohaplotig	exon	71821551	71821646	100	+	.	ID=FBgn0032205.1.mrna1.exon3;Name=FBgn0032205.1;Parent=FBgn0032205.1.mrna1;Target=FBgn0032205.1 667 762 +
ChrX	stalkie_big_nohaplotig	exon	71821709	71821816	100	+	.	ID=FBgn0032205.1.mrna1.exon4;Name=FBgn0032205.1;Parent=FBgn0032205.1.mrna1;Target=FBgn0032205.1 763 870 +
ChrX	stalkie_big_nohaplotig	CDS	71819071	71819561	99	+	0	ID=FBgn0032205.1.mrna1.cds1;Name=FBgn0032205.1;Parent=FBgn0032205.1.mrna1;Target=FBgn0032205.1 1 491 +
ChrX	stalkie_big_nohaplotig	CDS	71821313	71821487	100	+	2	ID=FBgn0032205.1.mrna1.cds2;Name=FBgn0032205.1;Parent=FBgn0032205.1.mrna1;Target=FBgn0032205.1 492 666 +
ChrX	stalkie_big_nohaplotig	CDS	71821551	71821646	100	+	0	ID=FBgn0032205.1.mrna1.cds3;Name=FBgn0032205.1;Parent=FBgn0032205.1.mrna1;Target=FBgn0032205.1 667 762 +
ChrX	stalkie_big_nohaplotig	CDS	71821709	71821816	100	+	0	ID=FBgn0032205.1.mrna1.cds4;Name=FBgn0032205.1;Parent=FBgn0032205.1.mrna1;Target=FBgn0032205.1 763 870 +
ChrX	stalkie_big_nohaplotig	mRNA	71704647	71737462	.	+	.	ID=FBgn0085424.1.mrna1;Name=FBgn0085424.1;Parent=FBgn0085424.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1671;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	71704647	71704779	100	+	.	ID=FBgn0085424.1.mrna1.exon1;Name=FBgn0085424.1;Parent=FBgn0085424.1.mrna1;Target=FBgn0085424.1 1 133 +
ChrX	stalkie_big_nohaplotig	exon	71713505	71713549	100	+	.	ID=FBgn0085424.1.mrna1.exon2;Name=FBgn0085424.1;Parent=FBgn0085424.1.mrna1;Target=FBgn0085424.1 134 178 +
ChrX	stalkie_big_nohaplotig	exon	71726658	71727852	100	+	.	ID=FBgn0085424.1.mrna1.exon3;Name=FBgn0085424.1;Parent=FBgn0085424.1.mrna1;Target=FBgn0085424.1 179 1373 +
ChrX	stalkie_big_nohaplotig	exon	71737165	71737462	100	+	.	ID=FBgn0085424.1.mrna1.exon4;Name=FBgn0085424.1;Parent=FBgn0085424.1.mrna1;Target=FBgn0085424.1 1374 1671 +
ChrX	stalkie_big_nohaplotig	CDS	71704647	71704779	100	+	0	ID=FBgn0085424.1.mrna1.cds1;Name=FBgn0085424.1;Parent=FBgn0085424.1.mrna1;Target=FBgn0085424.1 1 133 +
ChrX	stalkie_big_nohaplotig	CDS	71713505	71713549	100	+	1	ID=FBgn0085424.1.mrna1.cds2;Name=FBgn0085424.1;Parent=FBgn0085424.1.mrna1;Target=FBgn0085424.1 134 178 +
ChrX	stalkie_big_nohaplotig	CDS	71726658	71727852	100	+	1	ID=FBgn0085424.1.mrna1.cds3;Name=FBgn0085424.1;Parent=FBgn0085424.1.mrna1;Target=FBgn0085424.1 179 1373 +
ChrX	stalkie_big_nohaplotig	CDS	71737165	71737462	100	+	2	ID=FBgn0085424.1.mrna1.cds4;Name=FBgn0085424.1;Parent=FBgn0085424.1.mrna1;Target=FBgn0085424.1 1374 1671 +
Chr2	stalkie_big_nohaplotig	mRNA	8246450	8248551	.	-	.	ID=FBgn0015721.1.mrna1;Name=FBgn0015721.1;Parent=FBgn0015721.1.path1;Dir=sensecoverage=96.1;identity=99.5;matches=1317;mismatches=6;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	8248311	8248551	99	-	.	ID=FBgn0015721.1.mrna1.exon1;Name=FBgn0015721.1;Parent=FBgn0015721.1.mrna1;Target=FBgn0015721.1 55 295 +
Chr2	stalkie_big_nohaplotig	exon	8247248	8247733	99	-	.	ID=FBgn0015721.1.mrna1.exon2;Name=FBgn0015721.1;Parent=FBgn0015721.1.mrna1;Target=FBgn0015721.1 296 781 +
Chr2	stalkie_big_nohaplotig	exon	8246993	8247183	99	-	.	ID=FBgn0015721.1.mrna1.exon3;Name=FBgn0015721.1;Parent=FBgn0015721.1.mrna1;Target=FBgn0015721.1 782 972 +
Chr2	stalkie_big_nohaplotig	exon	8246782	8246919	100	-	.	ID=FBgn0015721.1.mrna1.exon4;Name=FBgn0015721.1;Parent=FBgn0015721.1.mrna1;Target=FBgn0015721.1 973 1110 +
Chr2	stalkie_big_nohaplotig	exon	8246450	8246716	99	-	.	ID=FBgn0015721.1.mrna1.exon5;Name=FBgn0015721.1;Parent=FBgn0015721.1.mrna1;Target=FBgn0015721.1 1111 1377 +
Chr2	stalkie_big_nohaplotig	CDS	8248311	8248551	99	-	0	ID=FBgn0015721.1.mrna1.cds1;Name=FBgn0015721.1;Parent=FBgn0015721.1.mrna1;Target=FBgn0015721.1 55 295 +
Chr2	stalkie_big_nohaplotig	CDS	8247248	8247733	99	-	1	ID=FBgn0015721.1.mrna1.cds2;Name=FBgn0015721.1;Parent=FBgn0015721.1.mrna1;Target=FBgn0015721.1 296 781 +
Chr2	stalkie_big_nohaplotig	CDS	8246993	8247183	99	-	1	ID=FBgn0015721.1.mrna1.cds3;Name=FBgn0015721.1;Parent=FBgn0015721.1.mrna1;Target=FBgn0015721.1 782 972 +
Chr2	stalkie_big_nohaplotig	CDS	8246782	8246919	100	-	0	ID=FBgn0015721.1.mrna1.cds4;Name=FBgn0015721.1;Parent=FBgn0015721.1.mrna1;Target=FBgn0015721.1 973 1110 +
Chr2	stalkie_big_nohaplotig	CDS	8246450	8246716	99	-	0	ID=FBgn0015721.1.mrna1.cds5;Name=FBgn0015721.1;Parent=FBgn0015721.1.mrna1;Target=FBgn0015721.1 1111 1377 +
Chr2	stalkie_big_nohaplotig	mRNA	8208127	8233485	.	+	.	ID=FBgn0034590.1.mrna1;Name=FBgn0034590.1;Parent=FBgn0034590.1.path1;Dir=sensecoverage=100.0;identity=99.0;matches=4226;mismatches=22;indels=21;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	8208127	8209030	97	+	.	ID=FBgn0034590.1.mrna1.exon1;Name=FBgn0034590.1;Parent=FBgn0034590.1.mrna1;Target=FBgn0034590.1 1 883 +
Chr2	stalkie_big_nohaplotig	exon	8229293	8229449	100	+	.	ID=FBgn0034590.1.mrna1.exon2;Name=FBgn0034590.1;Parent=FBgn0034590.1.mrna1;Target=FBgn0034590.1 884 1040 +
Chr2	stalkie_big_nohaplotig	exon	8229612	8230296	99	+	.	ID=FBgn0034590.1.mrna1.exon3;Name=FBgn0034590.1;Parent=FBgn0034590.1.mrna1;Target=FBgn0034590.1 1041 1725 +
Chr2	stalkie_big_nohaplotig	exon	8230357	8231362	99	+	.	ID=FBgn0034590.1.mrna1.exon4;Name=FBgn0034590.1;Parent=FBgn0034590.1.mrna1;Target=FBgn0034590.1 1726 2731 +
Chr2	stalkie_big_nohaplotig	exon	8231431	8232305	99	+	.	ID=FBgn0034590.1.mrna1.exon5;Name=FBgn0034590.1;Parent=FBgn0034590.1.mrna1;Target=FBgn0034590.1 2732 3606 +
Chr2	stalkie_big_nohaplotig	exon	8232369	8232615	98	+	.	ID=FBgn0034590.1.mrna1.exon6;Name=FBgn0034590.1;Parent=FBgn0034590.1.mrna1;Target=FBgn0034590.1 3607 3853 +
Chr2	stalkie_big_nohaplotig	exon	8233091	8233485	99	+	.	ID=FBgn0034590.1.mrna1.exon7;Name=FBgn0034590.1;Parent=FBgn0034590.1.mrna1;Target=FBgn0034590.1 3854 4248 +
Chr2	stalkie_big_nohaplotig	CDS	8208127	8209030	97	+	0	ID=FBgn0034590.1.mrna1.cds1;Name=FBgn0034590.1;Parent=FBgn0034590.1.mrna1;Target=FBgn0034590.1 1 883 +
Chr2	stalkie_big_nohaplotig	CDS	8229293	8229449	100	+	1	ID=FBgn0034590.1.mrna1.cds2;Name=FBgn0034590.1;Parent=FBgn0034590.1.mrna1;Target=FBgn0034590.1 884 1040 +
Chr2	stalkie_big_nohaplotig	CDS	8229612	8230296	99	+	2	ID=FBgn0034590.1.mrna1.cds3;Name=FBgn0034590.1;Parent=FBgn0034590.1.mrna1;Target=FBgn0034590.1 1041 1725 +
Chr2	stalkie_big_nohaplotig	CDS	8230357	8231362	99	+	0	ID=FBgn0034590.1.mrna1.cds4;Name=FBgn0034590.1;Parent=FBgn0034590.1.mrna1;Target=FBgn0034590.1 1726 2731 +
Chr2	stalkie_big_nohaplotig	CDS	8231431	8232305	99	+	1	ID=FBgn0034590.1.mrna1.cds5;Name=FBgn0034590.1;Parent=FBgn0034590.1.mrna1;Target=FBgn0034590.1 2732 3606 +
Chr2	stalkie_big_nohaplotig	CDS	8232369	8232615	98	+	0	ID=FBgn0034590.1.mrna1.cds6;Name=FBgn0034590.1;Parent=FBgn0034590.1.mrna1;Target=FBgn0034590.1 3607 3853 +
Chr2	stalkie_big_nohaplotig	CDS	8233091	8233485	99	+	1	ID=FBgn0034590.1.mrna1.cds7;Name=FBgn0034590.1;Parent=FBgn0034590.1.mrna1;Target=FBgn0034590.1 3854 4248 +
Chr2	stalkie_big_nohaplotig	mRNA	63983328	63984269	.	-	.	ID=ORF2285.mrna1;Name=ORF2285;Parent=ORF2285.path1;Dir=sensecoverage=100.0;identity=99.8;matches=880;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	63984206	63984269	100	-	.	ID=ORF2285.mrna1.exon1;Name=ORF2285;Parent=ORF2285.mrna1;Target=ORF2285 1 64 +
Chr2	stalkie_big_nohaplotig	exon	63983328	63984145	99	-	.	ID=ORF2285.mrna1.exon2;Name=ORF2285;Parent=ORF2285.mrna1;Target=ORF2285 65 882 +
Chr2	stalkie_big_nohaplotig	CDS	63984206	63984269	100	-	0	ID=ORF2285.mrna1.cds1;Name=ORF2285;Parent=ORF2285.mrna1;Target=ORF2285 1 64 +
Chr2	stalkie_big_nohaplotig	CDS	63983328	63984145	99	-	1	ID=ORF2285.mrna1.cds2;Name=ORF2285;Parent=ORF2285.mrna1;Target=ORF2285 65 882 +
ChrX	stalkie_big_nohaplotig	mRNA	60698557	60702461	.	+	.	ID=FBgn0031802.1.mrna1;Name=FBgn0031802.1;Parent=FBgn0031802.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=1448;mismatches=10;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	60698557	60698597	100	+	.	ID=FBgn0031802.1.mrna1.exon1;Name=FBgn0031802.1;Parent=FBgn0031802.1.mrna1;Target=FBgn0031802.1 1 41 +
ChrX	stalkie_big_nohaplotig	exon	60698687	60699332	99	+	.	ID=FBgn0031802.1.mrna1.exon2;Name=FBgn0031802.1;Parent=FBgn0031802.1.mrna1;Target=FBgn0031802.1 42 687 +
ChrX	stalkie_big_nohaplotig	exon	60699396	60699545	100	+	.	ID=FBgn0031802.1.mrna1.exon3;Name=FBgn0031802.1;Parent=FBgn0031802.1.mrna1;Target=FBgn0031802.1 688 837 +
ChrX	stalkie_big_nohaplotig	exon	60700689	60700875	99	+	.	ID=FBgn0031802.1.mrna1.exon4;Name=FBgn0031802.1;Parent=FBgn0031802.1.mrna1;Target=FBgn0031802.1 838 1024 +
ChrX	stalkie_big_nohaplotig	exon	60701964	60702209	99	+	.	ID=FBgn0031802.1.mrna1.exon5;Name=FBgn0031802.1;Parent=FBgn0031802.1.mrna1;Target=FBgn0031802.1 1025 1270 +
ChrX	stalkie_big_nohaplotig	exon	60702274	60702461	98	+	.	ID=FBgn0031802.1.mrna1.exon6;Name=FBgn0031802.1;Parent=FBgn0031802.1.mrna1;Target=FBgn0031802.1 1271 1458 +
ChrX	stalkie_big_nohaplotig	CDS	60698557	60698597	100	+	0	ID=FBgn0031802.1.mrna1.cds1;Name=FBgn0031802.1;Parent=FBgn0031802.1.mrna1;Target=FBgn0031802.1 1 41 +
ChrX	stalkie_big_nohaplotig	CDS	60698687	60699332	99	+	2	ID=FBgn0031802.1.mrna1.cds2;Name=FBgn0031802.1;Parent=FBgn0031802.1.mrna1;Target=FBgn0031802.1 42 687 +
ChrX	stalkie_big_nohaplotig	CDS	60699396	60699545	100	+	0	ID=FBgn0031802.1.mrna1.cds3;Name=FBgn0031802.1;Parent=FBgn0031802.1.mrna1;Target=FBgn0031802.1 688 837 +
ChrX	stalkie_big_nohaplotig	CDS	60700689	60700875	99	+	0	ID=FBgn0031802.1.mrna1.cds4;Name=FBgn0031802.1;Parent=FBgn0031802.1.mrna1;Target=FBgn0031802.1 838 1024 +
ChrX	stalkie_big_nohaplotig	CDS	60701964	60702209	99	+	1	ID=FBgn0031802.1.mrna1.cds5;Name=FBgn0031802.1;Parent=FBgn0031802.1.mrna1;Target=FBgn0031802.1 1025 1270 +
ChrX	stalkie_big_nohaplotig	CDS	60702274	60702461	98	+	1	ID=FBgn0031802.1.mrna1.cds6;Name=FBgn0031802.1;Parent=FBgn0031802.1.mrna1;Target=FBgn0031802.1 1271 1458 +
ChrX	stalkie_big_nohaplotig	mRNA	60670822	60686177	.	+	.	ID=FBgn0050357.4.mrna1;Name=FBgn0050357.4;Parent=FBgn0050357.4.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1771;mismatches=4;indels=1;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	60670822	60670876	98	+	.	ID=FBgn0050357.4.mrna1.exon1;Name=FBgn0050357.4;Parent=FBgn0050357.4.mrna1;Target=FBgn0050357.4 1 55 +
ChrX	stalkie_big_nohaplotig	exon	60684325	60684393	97	+	.	ID=FBgn0050357.4.mrna1.exon2;Name=FBgn0050357.4;Parent=FBgn0050357.4.mrna1;Target=FBgn0050357.4 56 125 +
ChrX	stalkie_big_nohaplotig	exon	60684527	60686177	99	+	.	ID=FBgn0050357.4.mrna1.exon3;Name=FBgn0050357.4;Parent=FBgn0050357.4.mrna1;Target=FBgn0050357.4 126 1776 +
ChrX	stalkie_big_nohaplotig	CDS	60684353	60684393	95	+	0	ID=FBgn0050357.4.mrna1.cds1;Name=FBgn0050357.4;Parent=FBgn0050357.4.mrna1;Target=FBgn0050357.4 84 125 +
ChrX	stalkie_big_nohaplotig	CDS	60684527	60684562	100	+	0	ID=FBgn0050357.4.mrna1.cds2;Name=FBgn0050357.4;Parent=FBgn0050357.4.mrna1;Target=FBgn0050357.4 126 161 +
ChrX	stalkie_big_nohaplotig	mRNA	74212375	74213715	.	-	.	ID=FBgn0259716.1.mrna1;Name=FBgn0259716.1;Parent=FBgn0259716.1.path1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1336;mismatches=4;indels=0;unknowns=1
ChrX	stalkie_big_nohaplotig	exon	74212375	74213715	99	-	.	ID=FBgn0259716.1.mrna1.exon1;Name=FBgn0259716.1;Parent=FBgn0259716.1.mrna1;Target=FBgn0259716.1 1341 1 .
ChrX	stalkie_big_nohaplotig	CDS	74212375	74213715	99	-	0	ID=FBgn0259716.1.mrna1.cds1;Name=FBgn0259716.1;Parent=FBgn0259716.1.mrna1;Target=FBgn0259716.1 1341 1 .
Chr2	stalkie_big_nohaplotig	mRNA	101575036	101580494	.	-	.	ID=FBgn0262167.1.mrna1;Name=FBgn0262167.1;Parent=FBgn0262167.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3656;mismatches=0;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	101579358	101580494	100	-	.	ID=FBgn0262167.1.mrna1.exon1;Name=FBgn0262167.1;Parent=FBgn0262167.1.mrna1;Target=FBgn0262167.1 1 1137 +
Chr2	stalkie_big_nohaplotig	exon	101576985	101579283	100	-	.	ID=FBgn0262167.1.mrna1.exon2;Name=FBgn0262167.1;Parent=FBgn0262167.1.mrna1;Target=FBgn0262167.1 1138 3436 +
Chr2	stalkie_big_nohaplotig	exon	101575036	101575255	99	-	.	ID=FBgn0262167.1.mrna1.exon3;Name=FBgn0262167.1;Parent=FBgn0262167.1.mrna1;Target=FBgn0262167.1 3437 3657 +
Chr2	stalkie_big_nohaplotig	CDS	101579358	101580494	100	-	0	ID=FBgn0262167.1.mrna1.cds1;Name=FBgn0262167.1;Parent=FBgn0262167.1.mrna1;Target=FBgn0262167.1 1 1137 +
Chr2	stalkie_big_nohaplotig	CDS	101576985	101579283	100	-	0	ID=FBgn0262167.1.mrna1.cds2;Name=FBgn0262167.1;Parent=FBgn0262167.1.mrna1;Target=FBgn0262167.1 1138 3436 +
Chr2	stalkie_big_nohaplotig	CDS	101575036	101575255	99	-	1	ID=FBgn0262167.1.mrna1.cds3;Name=FBgn0262167.1;Parent=FBgn0262167.1.mrna1;Target=FBgn0262167.1 3437 3657 +
Chr1	stalkie_big_nohaplotig	mRNA	107401075	107426303	.	-	.	ID=FBgn0052758.1.mrna1;Name=FBgn0052758.1;Parent=FBgn0052758.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1506;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	107426139	107426303	100	-	.	ID=FBgn0052758.1.mrna1.exon1;Name=FBgn0052758.1;Parent=FBgn0052758.1.mrna1;Target=FBgn0052758.1 1 165 +
Chr1	stalkie_big_nohaplotig	exon	107425953	107426026	100	-	.	ID=FBgn0052758.1.mrna1.exon2;Name=FBgn0052758.1;Parent=FBgn0052758.1.mrna1;Target=FBgn0052758.1 166 239 +
Chr1	stalkie_big_nohaplotig	exon	107403269	107403371	100	-	.	ID=FBgn0052758.1.mrna1.exon3;Name=FBgn0052758.1;Parent=FBgn0052758.1.mrna1;Target=FBgn0052758.1 240 342 +
Chr1	stalkie_big_nohaplotig	exon	107403109	107403191	100	-	.	ID=FBgn0052758.1.mrna1.exon4;Name=FBgn0052758.1;Parent=FBgn0052758.1.mrna1;Target=FBgn0052758.1 343 425 +
Chr1	stalkie_big_nohaplotig	exon	107402395	107403040	100	-	.	ID=FBgn0052758.1.mrna1.exon5;Name=FBgn0052758.1;Parent=FBgn0052758.1.mrna1;Target=FBgn0052758.1 426 1071 +
Chr1	stalkie_big_nohaplotig	exon	107402142	107402331	100	-	.	ID=FBgn0052758.1.mrna1.exon6;Name=FBgn0052758.1;Parent=FBgn0052758.1.mrna1;Target=FBgn0052758.1 1072 1261 +
Chr1	stalkie_big_nohaplotig	exon	107401205	107401383	100	-	.	ID=FBgn0052758.1.mrna1.exon7;Name=FBgn0052758.1;Parent=FBgn0052758.1.mrna1;Target=FBgn0052758.1 1262 1440 +
Chr1	stalkie_big_nohaplotig	exon	107401075	107401140	100	-	.	ID=FBgn0052758.1.mrna1.exon8;Name=FBgn0052758.1;Parent=FBgn0052758.1.mrna1;Target=FBgn0052758.1 1441 1506 +
Chr1	stalkie_big_nohaplotig	CDS	107426139	107426303	100	-	0	ID=FBgn0052758.1.mrna1.cds1;Name=FBgn0052758.1;Parent=FBgn0052758.1.mrna1;Target=FBgn0052758.1 1 165 +
Chr1	stalkie_big_nohaplotig	CDS	107425953	107426026	100	-	0	ID=FBgn0052758.1.mrna1.cds2;Name=FBgn0052758.1;Parent=FBgn0052758.1.mrna1;Target=FBgn0052758.1 166 239 +
Chr1	stalkie_big_nohaplotig	CDS	107403269	107403371	100	-	2	ID=FBgn0052758.1.mrna1.cds3;Name=FBgn0052758.1;Parent=FBgn0052758.1.mrna1;Target=FBgn0052758.1 240 342 +
Chr1	stalkie_big_nohaplotig	CDS	107403109	107403191	100	-	0	ID=FBgn0052758.1.mrna1.cds4;Name=FBgn0052758.1;Parent=FBgn0052758.1.mrna1;Target=FBgn0052758.1 343 425 +
Chr1	stalkie_big_nohaplotig	CDS	107402395	107403040	100	-	2	ID=FBgn0052758.1.mrna1.cds5;Name=FBgn0052758.1;Parent=FBgn0052758.1.mrna1;Target=FBgn0052758.1 426 1071 +
Chr1	stalkie_big_nohaplotig	CDS	107402142	107402331	100	-	0	ID=FBgn0052758.1.mrna1.cds6;Name=FBgn0052758.1;Parent=FBgn0052758.1.mrna1;Target=FBgn0052758.1 1072 1261 +
Chr1	stalkie_big_nohaplotig	CDS	107401205	107401383	100	-	1	ID=FBgn0052758.1.mrna1.cds7;Name=FBgn0052758.1;Parent=FBgn0052758.1.mrna1;Target=FBgn0052758.1 1262 1440 +
Chr1	stalkie_big_nohaplotig	CDS	107401075	107401140	100	-	0	ID=FBgn0052758.1.mrna1.cds8;Name=FBgn0052758.1;Parent=FBgn0052758.1.mrna1;Target=FBgn0052758.1 1441 1506 +
Chr2	stalkie_big_nohaplotig	mRNA	111929282	111930181	.	+	.	ID=FBgn0013343.1.mrna1;Name=FBgn0013343.1;Parent=FBgn0013343.1.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=900;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	111929282	111930181	100	+	.	ID=FBgn0013343.1.mrna1.exon1;Name=FBgn0013343.1;Parent=FBgn0013343.1.mrna1;Target=FBgn0013343.1 900 1 .
Chr2	stalkie_big_nohaplotig	CDS	111929282	111930181	100	+	0	ID=FBgn0013343.1.mrna1.cds1;Name=FBgn0013343.1;Parent=FBgn0013343.1.mrna1;Target=FBgn0013343.1 900 1 .
Chr2	stalkie_big_nohaplotig	mRNA	111947693	111955106	.	-	.	ID=FBgn0040283.1.mrna1;Name=FBgn0040283.1;Parent=FBgn0040283.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=2652;mismatches=0;indels=9;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	111954878	111955106	100	-	.	ID=FBgn0040283.1.mrna1.exon1;Name=FBgn0040283.1;Parent=FBgn0040283.1.mrna1;Target=FBgn0040283.1 1 229 +
Chr2	stalkie_big_nohaplotig	exon	111953702	111953922	100	-	.	ID=FBgn0040283.1.mrna1.exon2;Name=FBgn0040283.1;Parent=FBgn0040283.1.mrna1;Target=FBgn0040283.1 230 450 +
Chr2	stalkie_big_nohaplotig	exon	111953503	111953651	100	-	.	ID=FBgn0040283.1.mrna1.exon3;Name=FBgn0040283.1;Parent=FBgn0040283.1.mrna1;Target=FBgn0040283.1 451 599 +
Chr2	stalkie_big_nohaplotig	exon	111953269	111953437	100	-	.	ID=FBgn0040283.1.mrna1.exon4;Name=FBgn0040283.1;Parent=FBgn0040283.1.mrna1;Target=FBgn0040283.1 600 768 +
Chr2	stalkie_big_nohaplotig	exon	111951963	111952856	100	-	.	ID=FBgn0040283.1.mrna1.exon5;Name=FBgn0040283.1;Parent=FBgn0040283.1.mrna1;Target=FBgn0040283.1 769 1662 +
Chr2	stalkie_big_nohaplotig	exon	111951315	111951443	100	-	.	ID=FBgn0040283.1.mrna1.exon6;Name=FBgn0040283.1;Parent=FBgn0040283.1.mrna1;Target=FBgn0040283.1 1663 1791 +
Chr2	stalkie_big_nohaplotig	exon	111951152	111951234	100	-	.	ID=FBgn0040283.1.mrna1.exon7;Name=FBgn0040283.1;Parent=FBgn0040283.1.mrna1;Target=FBgn0040283.1 1792 1874 +
Chr2	stalkie_big_nohaplotig	exon	111948640	111949012	100	-	.	ID=FBgn0040283.1.mrna1.exon8;Name=FBgn0040283.1;Parent=FBgn0040283.1.mrna1;Target=FBgn0040283.1 1875 2247 +
Chr2	stalkie_big_nohaplotig	exon	111948460	111948573	100	-	.	ID=FBgn0040283.1.mrna1.exon9;Name=FBgn0040283.1;Parent=FBgn0040283.1.mrna1;Target=FBgn0040283.1 2248 2361 +
Chr2	stalkie_big_nohaplotig	exon	111948149	111948404	100	-	.	ID=FBgn0040283.1.mrna1.exon10;Name=FBgn0040283.1;Parent=FBgn0040283.1.mrna1;Target=FBgn0040283.1 2362 2617 +
Chr2	stalkie_big_nohaplotig	exon	111947693	111947736	79	-	.	ID=FBgn0040283.1.mrna1.exon11;Name=FBgn0040283.1;Parent=FBgn0040283.1.mrna1;Target=FBgn0040283.1 2618 2652 +
Chr2	stalkie_big_nohaplotig	CDS	111954878	111955106	100	-	0	ID=FBgn0040283.1.mrna1.cds1;Name=FBgn0040283.1;Parent=FBgn0040283.1.mrna1;Target=FBgn0040283.1 1 229 +
Chr2	stalkie_big_nohaplotig	CDS	111953702	111953922	100	-	1	ID=FBgn0040283.1.mrna1.cds2;Name=FBgn0040283.1;Parent=FBgn0040283.1.mrna1;Target=FBgn0040283.1 230 450 +
Chr2	stalkie_big_nohaplotig	CDS	111953503	111953651	100	-	0	ID=FBgn0040283.1.mrna1.cds3;Name=FBgn0040283.1;Parent=FBgn0040283.1.mrna1;Target=FBgn0040283.1 451 599 +
Chr2	stalkie_big_nohaplotig	CDS	111953269	111953437	100	-	2	ID=FBgn0040283.1.mrna1.cds4;Name=FBgn0040283.1;Parent=FBgn0040283.1.mrna1;Target=FBgn0040283.1 600 768 +
Chr2	stalkie_big_nohaplotig	CDS	111951963	111952856	100	-	0	ID=FBgn0040283.1.mrna1.cds5;Name=FBgn0040283.1;Parent=FBgn0040283.1.mrna1;Target=FBgn0040283.1 769 1662 +
Chr2	stalkie_big_nohaplotig	CDS	111951315	111951443	100	-	0	ID=FBgn0040283.1.mrna1.cds6;Name=FBgn0040283.1;Parent=FBgn0040283.1.mrna1;Target=FBgn0040283.1 1663 1791 +
Chr2	stalkie_big_nohaplotig	CDS	111951152	111951234	100	-	0	ID=FBgn0040283.1.mrna1.cds7;Name=FBgn0040283.1;Parent=FBgn0040283.1.mrna1;Target=FBgn0040283.1 1792 1874 +
Chr2	stalkie_big_nohaplotig	CDS	111948640	111949012	100	-	2	ID=FBgn0040283.1.mrna1.cds8;Name=FBgn0040283.1;Parent=FBgn0040283.1.mrna1;Target=FBgn0040283.1 1875 2247 +
Chr2	stalkie_big_nohaplotig	CDS	111948460	111948573	100	-	0	ID=FBgn0040283.1.mrna1.cds9;Name=FBgn0040283.1;Parent=FBgn0040283.1.mrna1;Target=FBgn0040283.1 2248 2361 +
Chr2	stalkie_big_nohaplotig	CDS	111948149	111948404	100	-	0	ID=FBgn0040283.1.mrna1.cds10;Name=FBgn0040283.1;Parent=FBgn0040283.1.mrna1;Target=FBgn0040283.1 2362 2617 +
Chr2	stalkie_big_nohaplotig	CDS	111947693	111947736	79	-	1	ID=FBgn0040283.1.mrna1.cds11;Name=FBgn0040283.1;Parent=FBgn0040283.1.mrna1;Target=FBgn0040283.1 2618 2652 +
Chr2	stalkie_big_nohaplotig	mRNA	111857359	111880788	.	-	.	ID=FBgn0058178.1.mrna1;Name=FBgn0058178.1;Parent=FBgn0058178.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2373;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	111880764	111880788	100	-	.	ID=FBgn0058178.1.mrna1.exon1;Name=FBgn0058178.1;Parent=FBgn0058178.1.mrna1;Target=FBgn0058178.1 1 25 +
Chr2	stalkie_big_nohaplotig	exon	111873360	111873534	100	-	.	ID=FBgn0058178.1.mrna1.exon2;Name=FBgn0058178.1;Parent=FBgn0058178.1.mrna1;Target=FBgn0058178.1 26 200 +
Chr2	stalkie_big_nohaplotig	exon	111869446	111869843	100	-	.	ID=FBgn0058178.1.mrna1.exon3;Name=FBgn0058178.1;Parent=FBgn0058178.1.mrna1;Target=FBgn0058178.1 201 598 +
Chr2	stalkie_big_nohaplotig	exon	111869250	111869396	100	-	.	ID=FBgn0058178.1.mrna1.exon4;Name=FBgn0058178.1;Parent=FBgn0058178.1.mrna1;Target=FBgn0058178.1 599 745 +
Chr2	stalkie_big_nohaplotig	exon	111866956	111867136	100	-	.	ID=FBgn0058178.1.mrna1.exon5;Name=FBgn0058178.1;Parent=FBgn0058178.1.mrna1;Target=FBgn0058178.1 746 926 +
Chr2	stalkie_big_nohaplotig	exon	111864915	111865126	100	-	.	ID=FBgn0058178.1.mrna1.exon6;Name=FBgn0058178.1;Parent=FBgn0058178.1.mrna1;Target=FBgn0058178.1 927 1138 +
Chr2	stalkie_big_nohaplotig	exon	111864201	111864361	100	-	.	ID=FBgn0058178.1.mrna1.exon7;Name=FBgn0058178.1;Parent=FBgn0058178.1.mrna1;Target=FBgn0058178.1 1139 1299 +
Chr2	stalkie_big_nohaplotig	exon	111863350	111863598	100	-	.	ID=FBgn0058178.1.mrna1.exon8;Name=FBgn0058178.1;Parent=FBgn0058178.1.mrna1;Target=FBgn0058178.1 1300 1548 +
Chr2	stalkie_big_nohaplotig	exon	111860040	111860265	100	-	.	ID=FBgn0058178.1.mrna1.exon9;Name=FBgn0058178.1;Parent=FBgn0058178.1.mrna1;Target=FBgn0058178.1 1549 1774 +
Chr2	stalkie_big_nohaplotig	exon	111858047	111858429	100	-	.	ID=FBgn0058178.1.mrna1.exon10;Name=FBgn0058178.1;Parent=FBgn0058178.1.mrna1;Target=FBgn0058178.1 1775 2157 +
Chr2	stalkie_big_nohaplotig	exon	111857359	111857574	100	-	.	ID=FBgn0058178.1.mrna1.exon11;Name=FBgn0058178.1;Parent=FBgn0058178.1.mrna1;Target=FBgn0058178.1 2158 2373 +
Chr2	stalkie_big_nohaplotig	CDS	111880764	111880788	100	-	0	ID=FBgn0058178.1.mrna1.cds1;Name=FBgn0058178.1;Parent=FBgn0058178.1.mrna1;Target=FBgn0058178.1 1 25 +
Chr2	stalkie_big_nohaplotig	CDS	111873360	111873534	100	-	1	ID=FBgn0058178.1.mrna1.cds2;Name=FBgn0058178.1;Parent=FBgn0058178.1.mrna1;Target=FBgn0058178.1 26 200 +
Chr2	stalkie_big_nohaplotig	CDS	111869446	111869843	100	-	2	ID=FBgn0058178.1.mrna1.cds3;Name=FBgn0058178.1;Parent=FBgn0058178.1.mrna1;Target=FBgn0058178.1 201 598 +
Chr2	stalkie_big_nohaplotig	CDS	111869250	111869396	100	-	1	ID=FBgn0058178.1.mrna1.cds4;Name=FBgn0058178.1;Parent=FBgn0058178.1.mrna1;Target=FBgn0058178.1 599 745 +
Chr2	stalkie_big_nohaplotig	CDS	111866956	111867136	100	-	1	ID=FBgn0058178.1.mrna1.cds5;Name=FBgn0058178.1;Parent=FBgn0058178.1.mrna1;Target=FBgn0058178.1 746 926 +
Chr2	stalkie_big_nohaplotig	CDS	111864915	111865126	100	-	2	ID=FBgn0058178.1.mrna1.cds6;Name=FBgn0058178.1;Parent=FBgn0058178.1.mrna1;Target=FBgn0058178.1 927 1138 +
Chr2	stalkie_big_nohaplotig	CDS	111864201	111864361	100	-	1	ID=FBgn0058178.1.mrna1.cds7;Name=FBgn0058178.1;Parent=FBgn0058178.1.mrna1;Target=FBgn0058178.1 1139 1299 +
Chr2	stalkie_big_nohaplotig	CDS	111863350	111863598	100	-	0	ID=FBgn0058178.1.mrna1.cds8;Name=FBgn0058178.1;Parent=FBgn0058178.1.mrna1;Target=FBgn0058178.1 1300 1548 +
Chr2	stalkie_big_nohaplotig	CDS	111860040	111860265	100	-	0	ID=FBgn0058178.1.mrna1.cds9;Name=FBgn0058178.1;Parent=FBgn0058178.1.mrna1;Target=FBgn0058178.1 1549 1774 +
Chr2	stalkie_big_nohaplotig	CDS	111858047	111858429	100	-	1	ID=FBgn0058178.1.mrna1.cds10;Name=FBgn0058178.1;Parent=FBgn0058178.1.mrna1;Target=FBgn0058178.1 1775 2157 +
Chr2	stalkie_big_nohaplotig	CDS	111857359	111857574	100	-	0	ID=FBgn0058178.1.mrna1.cds11;Name=FBgn0058178.1;Parent=FBgn0058178.1.mrna1;Target=FBgn0058178.1 2158 2373 +
Chr1	stalkie_big_nohaplotig	mRNA	21841844	21842860	.	+	.	ID=FBgn0014388.mrna1;Name=FBgn0014388;Parent=FBgn0014388.path1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1004;mismatches=13;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	21841844	21842860	98	+	.	ID=FBgn0014388.mrna1.exon1;Name=FBgn0014388;Parent=FBgn0014388.mrna1;Target=FBgn0014388 1017 1 .
Chr1	stalkie_big_nohaplotig	CDS	21841844	21842860	98	+	0	ID=FBgn0014388.mrna1.cds1;Name=FBgn0014388;Parent=FBgn0014388.mrna1;Target=FBgn0014388 1017 1 .
Chr2	stalkie_big_nohaplotig	mRNA	66882444	66900455	.	-	.	ID=FBgn0039925.1.mrna1;Name=FBgn0039925.1;Parent=FBgn0039925.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1676;mismatches=4;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	66900267	66900455	100	-	.	ID=FBgn0039925.1.mrna1.exon1;Name=FBgn0039925.1;Parent=FBgn0039925.1.mrna1;Target=FBgn0039925.1 1 189 +
Chr2	stalkie_big_nohaplotig	exon	66891563	66892440	99	-	.	ID=FBgn0039925.1.mrna1.exon2;Name=FBgn0039925.1;Parent=FBgn0039925.1.mrna1;Target=FBgn0039925.1 190 1067 +
Chr2	stalkie_big_nohaplotig	exon	66889923	66890151	99	-	.	ID=FBgn0039925.1.mrna1.exon3;Name=FBgn0039925.1;Parent=FBgn0039925.1.mrna1;Target=FBgn0039925.1 1068 1296 +
Chr2	stalkie_big_nohaplotig	exon	66889750	66889855	100	-	.	ID=FBgn0039925.1.mrna1.exon4;Name=FBgn0039925.1;Parent=FBgn0039925.1.mrna1;Target=FBgn0039925.1 1297 1402 +
Chr2	stalkie_big_nohaplotig	exon	66882444	66882721	100	-	.	ID=FBgn0039925.1.mrna1.exon5;Name=FBgn0039925.1;Parent=FBgn0039925.1.mrna1;Target=FBgn0039925.1 1403 1680 +
Chr2	stalkie_big_nohaplotig	CDS	66900267	66900455	100	-	0	ID=FBgn0039925.1.mrna1.cds1;Name=FBgn0039925.1;Parent=FBgn0039925.1.mrna1;Target=FBgn0039925.1 1 189 +
Chr2	stalkie_big_nohaplotig	CDS	66891563	66892440	99	-	0	ID=FBgn0039925.1.mrna1.cds2;Name=FBgn0039925.1;Parent=FBgn0039925.1.mrna1;Target=FBgn0039925.1 190 1067 +
Chr2	stalkie_big_nohaplotig	CDS	66889923	66890151	99	-	2	ID=FBgn0039925.1.mrna1.cds3;Name=FBgn0039925.1;Parent=FBgn0039925.1.mrna1;Target=FBgn0039925.1 1068 1296 +
Chr2	stalkie_big_nohaplotig	CDS	66889750	66889855	100	-	0	ID=FBgn0039925.1.mrna1.cds4;Name=FBgn0039925.1;Parent=FBgn0039925.1.mrna1;Target=FBgn0039925.1 1297 1402 +
Chr2	stalkie_big_nohaplotig	CDS	66882444	66882721	100	-	1	ID=FBgn0039925.1.mrna1.cds5;Name=FBgn0039925.1;Parent=FBgn0039925.1.mrna1;Target=FBgn0039925.1 1403 1680 +
Chr2	stalkie_big_nohaplotig	mRNA	149301788	149311270	.	-	.	ID=FBgn0004395.1.mrna1;Name=FBgn0004395.1;Parent=FBgn0004395.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=2031;mismatches=5;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	149311240	149311270	96	-	.	ID=FBgn0004395.1.mrna1.exon1;Name=FBgn0004395.1;Parent=FBgn0004395.1.mrna1;Target=FBgn0004395.1 1 32 +
Chr2	stalkie_big_nohaplotig	exon	149310964	149311173	100	-	.	ID=FBgn0004395.1.mrna1.exon2;Name=FBgn0004395.1;Parent=FBgn0004395.1.mrna1;Target=FBgn0004395.1 33 242 +
Chr2	stalkie_big_nohaplotig	exon	149306702	149307121	99	-	.	ID=FBgn0004395.1.mrna1.exon3;Name=FBgn0004395.1;Parent=FBgn0004395.1.mrna1;Target=FBgn0004395.1 243 662 +
Chr2	stalkie_big_nohaplotig	exon	149306415	149306617	100	-	.	ID=FBgn0004395.1.mrna1.exon4;Name=FBgn0004395.1;Parent=FBgn0004395.1.mrna1;Target=FBgn0004395.1 663 865 +
Chr2	stalkie_big_nohaplotig	exon	149305761	149305912	100	-	.	ID=FBgn0004395.1.mrna1.exon5;Name=FBgn0004395.1;Parent=FBgn0004395.1.mrna1;Target=FBgn0004395.1 866 1017 +
Chr2	stalkie_big_nohaplotig	exon	149303813	149303921	100	-	.	ID=FBgn0004395.1.mrna1.exon6;Name=FBgn0004395.1;Parent=FBgn0004395.1.mrna1;Target=FBgn0004395.1 1018 1126 +
Chr2	stalkie_big_nohaplotig	exon	149303527	149303649	100	-	.	ID=FBgn0004395.1.mrna1.exon7;Name=FBgn0004395.1;Parent=FBgn0004395.1.mrna1;Target=FBgn0004395.1 1127 1249 +
Chr2	stalkie_big_nohaplotig	exon	149303203	149303437	99	-	.	ID=FBgn0004395.1.mrna1.exon8;Name=FBgn0004395.1;Parent=FBgn0004395.1.mrna1;Target=FBgn0004395.1 1250 1484 +
Chr2	stalkie_big_nohaplotig	exon	149302912	149303128	100	-	.	ID=FBgn0004395.1.mrna1.exon9;Name=FBgn0004395.1;Parent=FBgn0004395.1.mrna1;Target=FBgn0004395.1 1485 1701 +
Chr2	stalkie_big_nohaplotig	exon	149302048	149302188	99	-	.	ID=FBgn0004395.1.mrna1.exon10;Name=FBgn0004395.1;Parent=FBgn0004395.1.mrna1;Target=FBgn0004395.1 1702 1842 +
Chr2	stalkie_big_nohaplotig	exon	149301788	149301982	100	-	.	ID=FBgn0004395.1.mrna1.exon11;Name=FBgn0004395.1;Parent=FBgn0004395.1.mrna1;Target=FBgn0004395.1 1843 2037 +
Chr2	stalkie_big_nohaplotig	CDS	149311240	149311268	96	-	0	ID=FBgn0004395.1.mrna1.cds1;Name=FBgn0004395.1;Parent=FBgn0004395.1.mrna1;Target=FBgn0004395.1 3 32 +
Chr2	stalkie_big_nohaplotig	CDS	149311030	149311173	100	-	0	ID=FBgn0004395.1.mrna1.cds2;Name=FBgn0004395.1;Parent=FBgn0004395.1.mrna1;Target=FBgn0004395.1 33 176 +
Chr2	stalkie_big_nohaplotig	mRNA	149319277	149320456	.	-	.	ID=FBgn0039509.1.mrna1;Name=FBgn0039509.1;Parent=FBgn0039509.1.path1;Dir=sensecoverage=100.0;identity=99.1;matches=779;mismatches=7;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	149320423	149320456	100	-	.	ID=FBgn0039509.1.mrna1.exon1;Name=FBgn0039509.1;Parent=FBgn0039509.1.mrna1;Target=FBgn0039509.1 1 34 +
Chr2	stalkie_big_nohaplotig	exon	149320230	149320364	99	-	.	ID=FBgn0039509.1.mrna1.exon2;Name=FBgn0039509.1;Parent=FBgn0039509.1.mrna1;Target=FBgn0039509.1 35 169 +
Chr2	stalkie_big_nohaplotig	exon	149320002	149320165	99	-	.	ID=FBgn0039509.1.mrna1.exon3;Name=FBgn0039509.1;Parent=FBgn0039509.1.mrna1;Target=FBgn0039509.1 170 333 +
Chr2	stalkie_big_nohaplotig	exon	149319709	149319948	100	-	.	ID=FBgn0039509.1.mrna1.exon4;Name=FBgn0039509.1;Parent=FBgn0039509.1.mrna1;Target=FBgn0039509.1 334 573 +
Chr2	stalkie_big_nohaplotig	exon	149319277	149319489	97	-	.	ID=FBgn0039509.1.mrna1.exon5;Name=FBgn0039509.1;Parent=FBgn0039509.1.mrna1;Target=FBgn0039509.1 574 786 +
Chr2	stalkie_big_nohaplotig	CDS	149320423	149320456	100	-	0	ID=FBgn0039509.1.mrna1.cds1;Name=FBgn0039509.1;Parent=FBgn0039509.1.mrna1;Target=FBgn0039509.1 1 34 +
Chr2	stalkie_big_nohaplotig	CDS	149320230	149320364	99	-	1	ID=FBgn0039509.1.mrna1.cds2;Name=FBgn0039509.1;Parent=FBgn0039509.1.mrna1;Target=FBgn0039509.1 35 169 +
Chr2	stalkie_big_nohaplotig	CDS	149320002	149320165	99	-	1	ID=FBgn0039509.1.mrna1.cds3;Name=FBgn0039509.1;Parent=FBgn0039509.1.mrna1;Target=FBgn0039509.1 170 333 +
Chr2	stalkie_big_nohaplotig	CDS	149319709	149319948	100	-	0	ID=FBgn0039509.1.mrna1.cds4;Name=FBgn0039509.1;Parent=FBgn0039509.1.mrna1;Target=FBgn0039509.1 334 573 +
Chr2	stalkie_big_nohaplotig	CDS	149319277	149319489	97	-	0	ID=FBgn0039509.1.mrna1.cds5;Name=FBgn0039509.1;Parent=FBgn0039509.1.mrna1;Target=FBgn0039509.1 574 786 +
Chr2	stalkie_big_nohaplotig	mRNA	149330675	149333682	.	+	.	ID=FBgn0015737.3.mrna1;Name=FBgn0015737.3;Parent=FBgn0015737.3.path1;Dir=sensecoverage=100.0;identity=98.6;matches=1405;mismatches=17;indels=3;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	149330675	149330793	99	+	.	ID=FBgn0015737.3.mrna1.exon1;Name=FBgn0015737.3;Parent=FBgn0015737.3.mrna1;Target=FBgn0015737.3 1 119 +
Chr2	stalkie_big_nohaplotig	exon	149330850	149331055	99	+	.	ID=FBgn0015737.3.mrna1.exon2;Name=FBgn0015737.3;Parent=FBgn0015737.3.mrna1;Target=FBgn0015737.3 120 325 +
Chr2	stalkie_big_nohaplotig	exon	149331117	149331417	99	+	.	ID=FBgn0015737.3.mrna1.exon3;Name=FBgn0015737.3;Parent=FBgn0015737.3.mrna1;Target=FBgn0015737.3 326 626 +
Chr2	stalkie_big_nohaplotig	exon	149332884	149333682	98	+	.	ID=FBgn0015737.3.mrna1.exon4;Name=FBgn0015737.3;Parent=FBgn0015737.3.mrna1;Target=FBgn0015737.3 627 1422 +
Chr2	stalkie_big_nohaplotig	CDS	149330675	149330793	99	+	0	ID=FBgn0015737.3.mrna1.cds1;Name=FBgn0015737.3;Parent=FBgn0015737.3.mrna1;Target=FBgn0015737.3 1 119 +
Chr2	stalkie_big_nohaplotig	CDS	149330850	149331055	99	+	2	ID=FBgn0015737.3.mrna1.cds2;Name=FBgn0015737.3;Parent=FBgn0015737.3.mrna1;Target=FBgn0015737.3 120 325 +
Chr2	stalkie_big_nohaplotig	CDS	149331117	149331417	99	+	1	ID=FBgn0015737.3.mrna1.cds3;Name=FBgn0015737.3;Parent=FBgn0015737.3.mrna1;Target=FBgn0015737.3 326 626 +
Chr2	stalkie_big_nohaplotig	CDS	149332884	149333682	98	+	2	ID=FBgn0015737.3.mrna1.cds4;Name=FBgn0015737.3;Parent=FBgn0015737.3.mrna1;Target=FBgn0015737.3 627 1422 +
Chr2	stalkie_big_nohaplotig	mRNA	163312854	163314616	.	+	.	ID=FBgn0038617.1.mrna1;Name=FBgn0038617.1;Parent=FBgn0038617.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1480;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	163312854	163313055	99	+	.	ID=FBgn0038617.1.mrna1.exon1;Name=FBgn0038617.1;Parent=FBgn0038617.1.mrna1;Target=FBgn0038617.1 1 202 +
Chr2	stalkie_big_nohaplotig	exon	163313109	163313646	100	+	.	ID=FBgn0038617.1.mrna1.exon2;Name=FBgn0038617.1;Parent=FBgn0038617.1.mrna1;Target=FBgn0038617.1 203 740 +
Chr2	stalkie_big_nohaplotig	exon	163313746	163314120	100	+	.	ID=FBgn0038617.1.mrna1.exon3;Name=FBgn0038617.1;Parent=FBgn0038617.1.mrna1;Target=FBgn0038617.1 741 1115 +
Chr2	stalkie_big_nohaplotig	exon	163314187	163314433	98	+	.	ID=FBgn0038617.1.mrna1.exon4;Name=FBgn0038617.1;Parent=FBgn0038617.1.mrna1;Target=FBgn0038617.1 1116 1362 +
Chr2	stalkie_big_nohaplotig	exon	163314494	163314616	99	+	.	ID=FBgn0038617.1.mrna1.exon5;Name=FBgn0038617.1;Parent=FBgn0038617.1.mrna1;Target=FBgn0038617.1 1363 1485 +
Chr2	stalkie_big_nohaplotig	CDS	163312854	163313055	99	+	0	ID=FBgn0038617.1.mrna1.cds1;Name=FBgn0038617.1;Parent=FBgn0038617.1.mrna1;Target=FBgn0038617.1 1 202 +
Chr2	stalkie_big_nohaplotig	CDS	163313109	163313646	100	+	1	ID=FBgn0038617.1.mrna1.cds2;Name=FBgn0038617.1;Parent=FBgn0038617.1.mrna1;Target=FBgn0038617.1 203 740 +
Chr2	stalkie_big_nohaplotig	CDS	163313746	163314120	100	+	2	ID=FBgn0038617.1.mrna1.cds3;Name=FBgn0038617.1;Parent=FBgn0038617.1.mrna1;Target=FBgn0038617.1 741 1115 +
Chr2	stalkie_big_nohaplotig	CDS	163314187	163314433	98	+	2	ID=FBgn0038617.1.mrna1.cds4;Name=FBgn0038617.1;Parent=FBgn0038617.1.mrna1;Target=FBgn0038617.1 1116 1362 +
Chr2	stalkie_big_nohaplotig	CDS	163314494	163314616	99	+	0	ID=FBgn0038617.1.mrna1.cds5;Name=FBgn0038617.1;Parent=FBgn0038617.1.mrna1;Target=FBgn0038617.1 1363 1485 +
Chr2	stalkie_big_nohaplotig	mRNA	74286110	74288324	.	+	.	ID=FBgn0039358.1.mrna1;Name=FBgn0039358.1;Parent=FBgn0039358.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1281;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	74286110	74286241	100	+	.	ID=FBgn0039358.1.mrna1.exon1;Name=FBgn0039358.1;Parent=FBgn0039358.1.mrna1;Target=FBgn0039358.1 1 132 +
Chr2	stalkie_big_nohaplotig	exon	74286350	74286427	100	+	.	ID=FBgn0039358.1.mrna1.exon2;Name=FBgn0039358.1;Parent=FBgn0039358.1.mrna1;Target=FBgn0039358.1 133 210 +
Chr2	stalkie_big_nohaplotig	exon	74286498	74287169	100	+	.	ID=FBgn0039358.1.mrna1.exon3;Name=FBgn0039358.1;Parent=FBgn0039358.1.mrna1;Target=FBgn0039358.1 211 882 +
Chr2	stalkie_big_nohaplotig	exon	74287226	74287333	100	+	.	ID=FBgn0039358.1.mrna1.exon4;Name=FBgn0039358.1;Parent=FBgn0039358.1.mrna1;Target=FBgn0039358.1 883 990 +
Chr2	stalkie_big_nohaplotig	exon	74287387	74287573	100	+	.	ID=FBgn0039358.1.mrna1.exon5;Name=FBgn0039358.1;Parent=FBgn0039358.1.mrna1;Target=FBgn0039358.1 991 1177 +
Chr2	stalkie_big_nohaplotig	exon	74287646	74287721	100	+	.	ID=FBgn0039358.1.mrna1.exon6;Name=FBgn0039358.1;Parent=FBgn0039358.1.mrna1;Target=FBgn0039358.1 1178 1253 +
Chr2	stalkie_big_nohaplotig	exon	74288297	74288324	100	+	.	ID=FBgn0039358.1.mrna1.exon7;Name=FBgn0039358.1;Parent=FBgn0039358.1.mrna1;Target=FBgn0039358.1 1254 1281 +
Chr2	stalkie_big_nohaplotig	CDS	74286110	74286241	100	+	0	ID=FBgn0039358.1.mrna1.cds1;Name=FBgn0039358.1;Parent=FBgn0039358.1.mrna1;Target=FBgn0039358.1 1 132 +
Chr2	stalkie_big_nohaplotig	CDS	74286350	74286427	100	+	0	ID=FBgn0039358.1.mrna1.cds2;Name=FBgn0039358.1;Parent=FBgn0039358.1.mrna1;Target=FBgn0039358.1 133 210 +
Chr2	stalkie_big_nohaplotig	CDS	74286498	74287169	100	+	0	ID=FBgn0039358.1.mrna1.cds3;Name=FBgn0039358.1;Parent=FBgn0039358.1.mrna1;Target=FBgn0039358.1 211 882 +
Chr2	stalkie_big_nohaplotig	CDS	74287226	74287333	100	+	0	ID=FBgn0039358.1.mrna1.cds4;Name=FBgn0039358.1;Parent=FBgn0039358.1.mrna1;Target=FBgn0039358.1 883 990 +
Chr2	stalkie_big_nohaplotig	CDS	74287387	74287573	100	+	0	ID=FBgn0039358.1.mrna1.cds5;Name=FBgn0039358.1;Parent=FBgn0039358.1.mrna1;Target=FBgn0039358.1 991 1177 +
Chr2	stalkie_big_nohaplotig	CDS	74287646	74287721	100	+	1	ID=FBgn0039358.1.mrna1.cds6;Name=FBgn0039358.1;Parent=FBgn0039358.1.mrna1;Target=FBgn0039358.1 1178 1253 +
Chr2	stalkie_big_nohaplotig	CDS	74288297	74288324	100	+	2	ID=FBgn0039358.1.mrna1.cds7;Name=FBgn0039358.1;Parent=FBgn0039358.1.mrna1;Target=FBgn0039358.1 1254 1281 +
Chr1	stalkie_big_nohaplotig	mRNA	147483064	147483544	.	+	.	ID=FBgn0044030.1.mrna1;Name=FBgn0044030.1;Parent=FBgn0044030.1.path1;Dir=sensecoverage=100.0;identity=97.2;matches=376;mismatches=11;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	147483064	147483129	95	+	.	ID=FBgn0044030.1.mrna1.exon1;Name=FBgn0044030.1;Parent=FBgn0044030.1.mrna1;Target=FBgn0044030.1 1 66 +
Chr1	stalkie_big_nohaplotig	exon	147483224	147483544	97	+	.	ID=FBgn0044030.1.mrna1.exon2;Name=FBgn0044030.1;Parent=FBgn0044030.1.mrna1;Target=FBgn0044030.1 67 387 +
Chr1	stalkie_big_nohaplotig	CDS	147483064	147483129	95	+	0	ID=FBgn0044030.1.mrna1.cds1;Name=FBgn0044030.1;Parent=FBgn0044030.1.mrna1;Target=FBgn0044030.1 1 66 +
Chr1	stalkie_big_nohaplotig	CDS	147483224	147483544	97	+	0	ID=FBgn0044030.1.mrna1.cds2;Name=FBgn0044030.1;Parent=FBgn0044030.1.mrna1;Target=FBgn0044030.1 67 387 +
Chr1	stalkie_big_nohaplotig	mRNA	61659533	61661589	.	-	.	ID=FBgn0036999.1.mrna1;Name=FBgn0036999.1;Parent=FBgn0036999.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1109;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	61661431	61661589	99	-	.	ID=FBgn0036999.1.mrna1.exon1;Name=FBgn0036999.1;Parent=FBgn0036999.1.mrna1;Target=FBgn0036999.1 1 159 +
Chr1	stalkie_big_nohaplotig	exon	61659533	61660483	100	-	.	ID=FBgn0036999.1.mrna1.exon2;Name=FBgn0036999.1;Parent=FBgn0036999.1.mrna1;Target=FBgn0036999.1 160 1110 +
Chr1	stalkie_big_nohaplotig	CDS	61661431	61661589	99	-	0	ID=FBgn0036999.1.mrna1.cds1;Name=FBgn0036999.1;Parent=FBgn0036999.1.mrna1;Target=FBgn0036999.1 1 159 +
Chr1	stalkie_big_nohaplotig	CDS	61659533	61660483	100	-	0	ID=FBgn0036999.1.mrna1.cds2;Name=FBgn0036999.1;Parent=FBgn0036999.1.mrna1;Target=FBgn0036999.1 160 1110 +
Chr1	stalkie_big_nohaplotig	mRNA	61589173	61590734	.	-	.	ID=FBgn0036354.1.mrna1;Name=FBgn0036354.1;Parent=FBgn0036354.1.path1;Dir=sensecoverage=99.5;identity=99.7;matches=1102;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	61590378	61590734	100	-	.	ID=FBgn0036354.1.mrna1.exon1;Name=FBgn0036354.1;Parent=FBgn0036354.1.mrna1;Target=FBgn0036354.1 1 357 +
Chr1	stalkie_big_nohaplotig	exon	61589789	61590319	99	-	.	ID=FBgn0036354.1.mrna1.exon2;Name=FBgn0036354.1;Parent=FBgn0036354.1.mrna1;Target=FBgn0036354.1 358 888 +
Chr1	stalkie_big_nohaplotig	exon	61589173	61589389	99	-	.	ID=FBgn0036354.1.mrna1.exon3;Name=FBgn0036354.1;Parent=FBgn0036354.1.mrna1;Target=FBgn0036354.1 889 1105 +
Chr1	stalkie_big_nohaplotig	CDS	61590378	61590734	100	-	0	ID=FBgn0036354.1.mrna1.cds1;Name=FBgn0036354.1;Parent=FBgn0036354.1.mrna1;Target=FBgn0036354.1 1 357 +
Chr1	stalkie_big_nohaplotig	CDS	61589789	61590319	99	-	0	ID=FBgn0036354.1.mrna1.cds2;Name=FBgn0036354.1;Parent=FBgn0036354.1.mrna1;Target=FBgn0036354.1 358 888 +
Chr1	stalkie_big_nohaplotig	CDS	61589174	61589389	99	-	0	ID=FBgn0036354.1.mrna1.cds3;Name=FBgn0036354.1;Parent=FBgn0036354.1.mrna1;Target=FBgn0036354.1 889 1104 +
Chr1	stalkie_big_nohaplotig	mRNA	61584119	61584709	.	+	.	ID=FBgn0037110.1.mrna1;Name=FBgn0037110.1;Parent=FBgn0037110.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=462;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	61584119	61584295	100	+	.	ID=FBgn0037110.1.mrna1.exon1;Name=FBgn0037110.1;Parent=FBgn0037110.1.mrna1;Target=FBgn0037110.1 1 177 +
Chr1	stalkie_big_nohaplotig	exon	61584362	61584513	100	+	.	ID=FBgn0037110.1.mrna1.exon2;Name=FBgn0037110.1;Parent=FBgn0037110.1.mrna1;Target=FBgn0037110.1 178 329 +
Chr1	stalkie_big_nohaplotig	exon	61584577	61584709	100	+	.	ID=FBgn0037110.1.mrna1.exon3;Name=FBgn0037110.1;Parent=FBgn0037110.1.mrna1;Target=FBgn0037110.1 330 462 +
Chr1	stalkie_big_nohaplotig	CDS	61584119	61584295	100	+	0	ID=FBgn0037110.1.mrna1.cds1;Name=FBgn0037110.1;Parent=FBgn0037110.1.mrna1;Target=FBgn0037110.1 1 177 +
Chr1	stalkie_big_nohaplotig	CDS	61584362	61584513	100	+	0	ID=FBgn0037110.1.mrna1.cds2;Name=FBgn0037110.1;Parent=FBgn0037110.1.mrna1;Target=FBgn0037110.1 178 329 +
Chr1	stalkie_big_nohaplotig	CDS	61584577	61584709	100	+	2	ID=FBgn0037110.1.mrna1.cds3;Name=FBgn0037110.1;Parent=FBgn0037110.1.mrna1;Target=FBgn0037110.1 330 462 +
Chr1	stalkie_big_nohaplotig	mRNA	61769849	61772840	.	-	.	ID=FBgn0026371.1.mrna1;Name=FBgn0026371.1;Parent=FBgn0026371.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=2557;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	61772709	61772840	100	-	.	ID=FBgn0026371.1.mrna1.exon1;Name=FBgn0026371.1;Parent=FBgn0026371.1.mrna1;Target=FBgn0026371.1 1 132 +
Chr1	stalkie_big_nohaplotig	exon	61772532	61772627	100	-	.	ID=FBgn0026371.1.mrna1.exon2;Name=FBgn0026371.1;Parent=FBgn0026371.1.mrna1;Target=FBgn0026371.1 133 228 +
Chr1	stalkie_big_nohaplotig	exon	61772081	61772474	100	-	.	ID=FBgn0026371.1.mrna1.exon3;Name=FBgn0026371.1;Parent=FBgn0026371.1.mrna1;Target=FBgn0026371.1 229 622 +
Chr1	stalkie_big_nohaplotig	exon	61771648	61772028	99	-	.	ID=FBgn0026371.1.mrna1.exon4;Name=FBgn0026371.1;Parent=FBgn0026371.1.mrna1;Target=FBgn0026371.1 623 1003 +
Chr1	stalkie_big_nohaplotig	exon	61771007	61771586	99	-	.	ID=FBgn0026371.1.mrna1.exon5;Name=FBgn0026371.1;Parent=FBgn0026371.1.mrna1;Target=FBgn0026371.1 1004 1583 +
Chr1	stalkie_big_nohaplotig	exon	61770429	61770948	100	-	.	ID=FBgn0026371.1.mrna1.exon6;Name=FBgn0026371.1;Parent=FBgn0026371.1.mrna1;Target=FBgn0026371.1 1584 2103 +
Chr1	stalkie_big_nohaplotig	exon	61770215	61770367	100	-	.	ID=FBgn0026371.1.mrna1.exon7;Name=FBgn0026371.1;Parent=FBgn0026371.1.mrna1;Target=FBgn0026371.1 2104 2256 +
Chr1	stalkie_big_nohaplotig	exon	61769849	61770151	100	-	.	ID=FBgn0026371.1.mrna1.exon8;Name=FBgn0026371.1;Parent=FBgn0026371.1.mrna1;Target=FBgn0026371.1 2257 2559 +
Chr1	stalkie_big_nohaplotig	CDS	61772709	61772840	100	-	0	ID=FBgn0026371.1.mrna1.cds1;Name=FBgn0026371.1;Parent=FBgn0026371.1.mrna1;Target=FBgn0026371.1 1 132 +
Chr1	stalkie_big_nohaplotig	CDS	61772532	61772627	100	-	0	ID=FBgn0026371.1.mrna1.cds2;Name=FBgn0026371.1;Parent=FBgn0026371.1.mrna1;Target=FBgn0026371.1 133 228 +
Chr1	stalkie_big_nohaplotig	CDS	61772081	61772474	100	-	0	ID=FBgn0026371.1.mrna1.cds3;Name=FBgn0026371.1;Parent=FBgn0026371.1.mrna1;Target=FBgn0026371.1 229 622 +
Chr1	stalkie_big_nohaplotig	CDS	61771648	61772028	99	-	1	ID=FBgn0026371.1.mrna1.cds4;Name=FBgn0026371.1;Parent=FBgn0026371.1.mrna1;Target=FBgn0026371.1 623 1003 +
Chr1	stalkie_big_nohaplotig	CDS	61771007	61771586	99	-	1	ID=FBgn0026371.1.mrna1.cds5;Name=FBgn0026371.1;Parent=FBgn0026371.1.mrna1;Target=FBgn0026371.1 1004 1583 +
Chr1	stalkie_big_nohaplotig	CDS	61770429	61770948	100	-	2	ID=FBgn0026371.1.mrna1.cds6;Name=FBgn0026371.1;Parent=FBgn0026371.1.mrna1;Target=FBgn0026371.1 1584 2103 +
Chr1	stalkie_big_nohaplotig	CDS	61770215	61770367	100	-	0	ID=FBgn0026371.1.mrna1.cds7;Name=FBgn0026371.1;Parent=FBgn0026371.1.mrna1;Target=FBgn0026371.1 2104 2256 +
Chr1	stalkie_big_nohaplotig	CDS	61769849	61770151	100	-	0	ID=FBgn0026371.1.mrna1.cds8;Name=FBgn0026371.1;Parent=FBgn0026371.1.mrna1;Target=FBgn0026371.1 2257 2559 +
Chr2	stalkie_big_nohaplotig	mRNA	64535075	64536599	.	+	.	ID=FBgn0015271.1.mrna1;Name=FBgn0015271.1;Parent=FBgn0015271.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1413;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	64535075	64535998	100	+	.	ID=FBgn0015271.1.mrna1.exon1;Name=FBgn0015271.1;Parent=FBgn0015271.1.mrna1;Target=FBgn0015271.1 1 924 +
Chr2	stalkie_big_nohaplotig	exon	64536057	64536263	100	+	.	ID=FBgn0015271.1.mrna1.exon2;Name=FBgn0015271.1;Parent=FBgn0015271.1.mrna1;Target=FBgn0015271.1 925 1131 +
Chr2	stalkie_big_nohaplotig	exon	64536318	64536599	100	+	.	ID=FBgn0015271.1.mrna1.exon3;Name=FBgn0015271.1;Parent=FBgn0015271.1.mrna1;Target=FBgn0015271.1 1132 1413 +
Chr2	stalkie_big_nohaplotig	CDS	64535075	64535998	100	+	0	ID=FBgn0015271.1.mrna1.cds1;Name=FBgn0015271.1;Parent=FBgn0015271.1.mrna1;Target=FBgn0015271.1 1 924 +
Chr2	stalkie_big_nohaplotig	CDS	64536057	64536263	100	+	0	ID=FBgn0015271.1.mrna1.cds2;Name=FBgn0015271.1;Parent=FBgn0015271.1.mrna1;Target=FBgn0015271.1 925 1131 +
Chr2	stalkie_big_nohaplotig	CDS	64536318	64536599	100	+	0	ID=FBgn0015271.1.mrna1.cds3;Name=FBgn0015271.1;Parent=FBgn0015271.1.mrna1;Target=FBgn0015271.1 1132 1413 +
Chr2	stalkie_big_nohaplotig	mRNA	64575654	64576110	.	+	.	ID=FBgn0040743.1.mrna1;Name=FBgn0040743.1;Parent=FBgn0040743.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=336;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	64575654	64575677	100	+	.	ID=FBgn0040743.1.mrna1.exon1;Name=FBgn0040743.1;Parent=FBgn0040743.1.mrna1;Target=FBgn0040743.1 1 24 +
Chr2	stalkie_big_nohaplotig	exon	64575743	64575828	100	+	.	ID=FBgn0040743.1.mrna1.exon2;Name=FBgn0040743.1;Parent=FBgn0040743.1.mrna1;Target=FBgn0040743.1 25 110 +
Chr2	stalkie_big_nohaplotig	exon	64575885	64576110	100	+	.	ID=FBgn0040743.1.mrna1.exon3;Name=FBgn0040743.1;Parent=FBgn0040743.1.mrna1;Target=FBgn0040743.1 111 336 +
Chr2	stalkie_big_nohaplotig	CDS	64575654	64575677	100	+	0	ID=FBgn0040743.1.mrna1.cds1;Name=FBgn0040743.1;Parent=FBgn0040743.1.mrna1;Target=FBgn0040743.1 1 24 +
Chr2	stalkie_big_nohaplotig	CDS	64575743	64575828	100	+	0	ID=FBgn0040743.1.mrna1.cds2;Name=FBgn0040743.1;Parent=FBgn0040743.1.mrna1;Target=FBgn0040743.1 25 110 +
Chr2	stalkie_big_nohaplotig	CDS	64575885	64576110	100	+	2	ID=FBgn0040743.1.mrna1.cds3;Name=FBgn0040743.1;Parent=FBgn0040743.1.mrna1;Target=FBgn0040743.1 111 336 +
ChrX	stalkie_big_nohaplotig	mRNA	24297746	24298681	.	-	.	ID=FBgn0034914.2.mrna1;Name=FBgn0034914.2;Parent=FBgn0034914.2.path1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=934;mismatches=2;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	24297746	24298681	99	-	.	ID=FBgn0034914.2.mrna1.exon1;Name=FBgn0034914.2;Parent=FBgn0034914.2.mrna1;Target=FBgn0034914.2 936 1 .
ChrX	stalkie_big_nohaplotig	CDS	24297746	24298681	99	-	0	ID=FBgn0034914.2.mrna1.cds1;Name=FBgn0034914.2;Parent=FBgn0034914.2.mrna1;Target=FBgn0034914.2 936 1 .
Chr2	stalkie_big_nohaplotig	mRNA	56386121	56393182	.	-	.	ID=FBgn0008654.1.mrna1;Name=FBgn0008654.1;Parent=FBgn0008654.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=3315;mismatches=2;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	56392993	56393182	100	-	.	ID=FBgn0008654.1.mrna1.exon1;Name=FBgn0008654.1;Parent=FBgn0008654.1.mrna1;Target=FBgn0008654.1 1 190 +
Chr2	stalkie_big_nohaplotig	exon	56392776	56392875	100	-	.	ID=FBgn0008654.1.mrna1.exon2;Name=FBgn0008654.1;Parent=FBgn0008654.1.mrna1;Target=FBgn0008654.1 191 290 +
Chr2	stalkie_big_nohaplotig	exon	56392541	56392711	99	-	.	ID=FBgn0008654.1.mrna1.exon3;Name=FBgn0008654.1;Parent=FBgn0008654.1.mrna1;Target=FBgn0008654.1 291 461 +
Chr2	stalkie_big_nohaplotig	exon	56392119	56392359	100	-	.	ID=FBgn0008654.1.mrna1.exon4;Name=FBgn0008654.1;Parent=FBgn0008654.1.mrna1;Target=FBgn0008654.1 462 702 +
Chr2	stalkie_big_nohaplotig	exon	56386121	56388735	99	-	.	ID=FBgn0008654.1.mrna1.exon5;Name=FBgn0008654.1;Parent=FBgn0008654.1.mrna1;Target=FBgn0008654.1 703 3318 +
Chr2	stalkie_big_nohaplotig	CDS	56392993	56393182	100	-	0	ID=FBgn0008654.1.mrna1.cds1;Name=FBgn0008654.1;Parent=FBgn0008654.1.mrna1;Target=FBgn0008654.1 1 190 +
Chr2	stalkie_big_nohaplotig	CDS	56392776	56392875	100	-	1	ID=FBgn0008654.1.mrna1.cds2;Name=FBgn0008654.1;Parent=FBgn0008654.1.mrna1;Target=FBgn0008654.1 191 290 +
Chr2	stalkie_big_nohaplotig	CDS	56392541	56392711	99	-	2	ID=FBgn0008654.1.mrna1.cds3;Name=FBgn0008654.1;Parent=FBgn0008654.1.mrna1;Target=FBgn0008654.1 291 461 +
Chr2	stalkie_big_nohaplotig	CDS	56392119	56392359	100	-	2	ID=FBgn0008654.1.mrna1.cds4;Name=FBgn0008654.1;Parent=FBgn0008654.1.mrna1;Target=FBgn0008654.1 462 702 +
Chr2	stalkie_big_nohaplotig	CDS	56386121	56388735	99	-	0	ID=FBgn0008654.1.mrna1.cds5;Name=FBgn0008654.1;Parent=FBgn0008654.1.mrna1;Target=FBgn0008654.1 703 3318 +
Chr2	stalkie_big_nohaplotig	mRNA	67447185	67457250	.	-	.	ID=FBgn0039900.1.mrna1;Name=FBgn0039900.1;Parent=FBgn0039900.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1284;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	67457238	67457250	100	-	.	ID=FBgn0039900.1.mrna1.exon1;Name=FBgn0039900.1;Parent=FBgn0039900.1.mrna1;Target=FBgn0039900.1 1 13 +
Chr2	stalkie_big_nohaplotig	exon	67456750	67456912	100	-	.	ID=FBgn0039900.1.mrna1.exon2;Name=FBgn0039900.1;Parent=FBgn0039900.1.mrna1;Target=FBgn0039900.1 14 176 +
Chr2	stalkie_big_nohaplotig	exon	67455836	67455991	100	-	.	ID=FBgn0039900.1.mrna1.exon3;Name=FBgn0039900.1;Parent=FBgn0039900.1.mrna1;Target=FBgn0039900.1 177 332 +
Chr2	stalkie_big_nohaplotig	exon	67454115	67454202	100	-	.	ID=FBgn0039900.1.mrna1.exon4;Name=FBgn0039900.1;Parent=FBgn0039900.1.mrna1;Target=FBgn0039900.1 333 420 +
Chr2	stalkie_big_nohaplotig	exon	67453745	67454047	100	-	.	ID=FBgn0039900.1.mrna1.exon5;Name=FBgn0039900.1;Parent=FBgn0039900.1.mrna1;Target=FBgn0039900.1 421 723 +
Chr2	stalkie_big_nohaplotig	exon	67453600	67453680	100	-	.	ID=FBgn0039900.1.mrna1.exon6;Name=FBgn0039900.1;Parent=FBgn0039900.1.mrna1;Target=FBgn0039900.1 724 804 +
Chr2	stalkie_big_nohaplotig	exon	67449486	67449654	100	-	.	ID=FBgn0039900.1.mrna1.exon7;Name=FBgn0039900.1;Parent=FBgn0039900.1.mrna1;Target=FBgn0039900.1 805 973 +
Chr2	stalkie_big_nohaplotig	exon	67449006	67449218	100	-	.	ID=FBgn0039900.1.mrna1.exon8;Name=FBgn0039900.1;Parent=FBgn0039900.1.mrna1;Target=FBgn0039900.1 974 1186 +
Chr2	stalkie_big_nohaplotig	exon	67447185	67447282	100	-	.	ID=FBgn0039900.1.mrna1.exon9;Name=FBgn0039900.1;Parent=FBgn0039900.1.mrna1;Target=FBgn0039900.1 1187 1284 +
Chr2	stalkie_big_nohaplotig	CDS	67457238	67457250	100	-	0	ID=FBgn0039900.1.mrna1.cds1;Name=FBgn0039900.1;Parent=FBgn0039900.1.mrna1;Target=FBgn0039900.1 1 13 +
Chr2	stalkie_big_nohaplotig	CDS	67456750	67456912	100	-	1	ID=FBgn0039900.1.mrna1.cds2;Name=FBgn0039900.1;Parent=FBgn0039900.1.mrna1;Target=FBgn0039900.1 14 176 +
Chr2	stalkie_big_nohaplotig	CDS	67455836	67455991	100	-	2	ID=FBgn0039900.1.mrna1.cds3;Name=FBgn0039900.1;Parent=FBgn0039900.1.mrna1;Target=FBgn0039900.1 177 332 +
Chr2	stalkie_big_nohaplotig	CDS	67454115	67454202	100	-	2	ID=FBgn0039900.1.mrna1.cds4;Name=FBgn0039900.1;Parent=FBgn0039900.1.mrna1;Target=FBgn0039900.1 333 420 +
Chr2	stalkie_big_nohaplotig	CDS	67453745	67454047	100	-	0	ID=FBgn0039900.1.mrna1.cds5;Name=FBgn0039900.1;Parent=FBgn0039900.1.mrna1;Target=FBgn0039900.1 421 723 +
Chr2	stalkie_big_nohaplotig	CDS	67453600	67453680	100	-	0	ID=FBgn0039900.1.mrna1.cds6;Name=FBgn0039900.1;Parent=FBgn0039900.1.mrna1;Target=FBgn0039900.1 724 804 +
Chr2	stalkie_big_nohaplotig	CDS	67449486	67449654	100	-	0	ID=FBgn0039900.1.mrna1.cds7;Name=FBgn0039900.1;Parent=FBgn0039900.1.mrna1;Target=FBgn0039900.1 805 973 +
Chr2	stalkie_big_nohaplotig	CDS	67449006	67449218	100	-	1	ID=FBgn0039900.1.mrna1.cds8;Name=FBgn0039900.1;Parent=FBgn0039900.1.mrna1;Target=FBgn0039900.1 974 1186 +
Chr2	stalkie_big_nohaplotig	CDS	67447185	67447282	100	-	1	ID=FBgn0039900.1.mrna1.cds9;Name=FBgn0039900.1;Parent=FBgn0039900.1.mrna1;Target=FBgn0039900.1 1187 1284 +
Chr1	stalkie_big_nohaplotig	mRNA	141708650	141711541	.	+	.	ID=ORF2135.mrna1;Name=ORF2135;Parent=ORF2135.path1;Dir=sensecoverage=100.0;identity=99.1;matches=904;mismatches=8;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	141708650	141708918	98	+	.	ID=ORF2135.mrna1.exon1;Name=ORF2135;Parent=ORF2135.mrna1;Target=ORF2135 1 269 +
Chr1	stalkie_big_nohaplotig	exon	141710388	141710667	99	+	.	ID=ORF2135.mrna1.exon2;Name=ORF2135;Parent=ORF2135.mrna1;Target=ORF2135 270 549 +
Chr1	stalkie_big_nohaplotig	exon	141711106	141711348	98	+	.	ID=ORF2135.mrna1.exon3;Name=ORF2135;Parent=ORF2135.mrna1;Target=ORF2135 550 792 +
Chr1	stalkie_big_nohaplotig	exon	141711422	141711541	100	+	.	ID=ORF2135.mrna1.exon4;Name=ORF2135;Parent=ORF2135.mrna1;Target=ORF2135 793 912 +
Chr1	stalkie_big_nohaplotig	CDS	141708650	141708918	98	+	0	ID=ORF2135.mrna1.cds1;Name=ORF2135;Parent=ORF2135.mrna1;Target=ORF2135 1 269 +
Chr1	stalkie_big_nohaplotig	CDS	141710388	141710667	99	+	2	ID=ORF2135.mrna1.cds2;Name=ORF2135;Parent=ORF2135.mrna1;Target=ORF2135 270 549 +
Chr1	stalkie_big_nohaplotig	CDS	141711106	141711348	98	+	0	ID=ORF2135.mrna1.cds3;Name=ORF2135;Parent=ORF2135.mrna1;Target=ORF2135 550 792 +
Chr1	stalkie_big_nohaplotig	CDS	141711422	141711541	100	+	0	ID=ORF2135.mrna1.cds4;Name=ORF2135;Parent=ORF2135.mrna1;Target=ORF2135 793 912 +
Chr2	stalkie_big_nohaplotig	mRNA	148038570	148301784	.	-	.	ID=FBgn0001235.1.mrna1;Name=FBgn0001235.1;Parent=FBgn0001235.1.path1;Dir=sensecoverage=58.4;identity=100.0;matches=888;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	148301501	148301784	100	-	.	ID=FBgn0001235.1.mrna1.exon1;Name=FBgn0001235.1;Parent=FBgn0001235.1.mrna1;Target=FBgn0001235.1 73 356 +
Chr2	stalkie_big_nohaplotig	exon	148291373	148291514	100	-	.	ID=FBgn0001235.1.mrna1.exon2;Name=FBgn0001235.1;Parent=FBgn0001235.1.mrna1;Target=FBgn0001235.1 357 498 +
Chr2	stalkie_big_nohaplotig	exon	148265364	148265414	100	-	.	ID=FBgn0001235.1.mrna1.exon3;Name=FBgn0001235.1;Parent=FBgn0001235.1.mrna1;Target=FBgn0001235.1 499 549 +
Chr2	stalkie_big_nohaplotig	exon	148257968	148258018	100	-	.	ID=FBgn0001235.1.mrna1.exon4;Name=FBgn0001235.1;Parent=FBgn0001235.1.mrna1;Target=FBgn0001235.1 550 600 +
Chr2	stalkie_big_nohaplotig	exon	148243777	148243962	100	-	.	ID=FBgn0001235.1.mrna1.exon5;Name=FBgn0001235.1;Parent=FBgn0001235.1.mrna1;Target=FBgn0001235.1 601 786 +
Chr2	stalkie_big_nohaplotig	exon	148083917	148084040	100	-	.	ID=FBgn0001235.1.mrna1.exon6;Name=FBgn0001235.1;Parent=FBgn0001235.1.mrna1;Target=FBgn0001235.1 787 910 +
Chr2	stalkie_big_nohaplotig	exon	148038570	148038619	100	-	.	ID=FBgn0001235.1.mrna1.exon7;Name=FBgn0001235.1;Parent=FBgn0001235.1.mrna1;Target=FBgn0001235.1 911 960 +
Chr2	stalkie_big_nohaplotig	CDS	148301501	148301784	100	-	0	ID=FBgn0001235.1.mrna1.cds1;Name=FBgn0001235.1;Parent=FBgn0001235.1.mrna1;Target=FBgn0001235.1 73 356 +
Chr2	stalkie_big_nohaplotig	CDS	148291373	148291514	100	-	2	ID=FBgn0001235.1.mrna1.cds2;Name=FBgn0001235.1;Parent=FBgn0001235.1.mrna1;Target=FBgn0001235.1 357 498 +
Chr2	stalkie_big_nohaplotig	CDS	148265364	148265414	100	-	0	ID=FBgn0001235.1.mrna1.cds3;Name=FBgn0001235.1;Parent=FBgn0001235.1.mrna1;Target=FBgn0001235.1 499 549 +
Chr2	stalkie_big_nohaplotig	CDS	148257968	148258018	100	-	0	ID=FBgn0001235.1.mrna1.cds4;Name=FBgn0001235.1;Parent=FBgn0001235.1.mrna1;Target=FBgn0001235.1 550 600 +
Chr2	stalkie_big_nohaplotig	CDS	148243777	148243962	100	-	0	ID=FBgn0001235.1.mrna1.cds5;Name=FBgn0001235.1;Parent=FBgn0001235.1.mrna1;Target=FBgn0001235.1 601 786 +
Chr2	stalkie_big_nohaplotig	CDS	148083917	148084040	100	-	0	ID=FBgn0001235.1.mrna1.cds6;Name=FBgn0001235.1;Parent=FBgn0001235.1.mrna1;Target=FBgn0001235.1 787 910 +
Chr2	stalkie_big_nohaplotig	CDS	148038570	148038619	100	-	1	ID=FBgn0001235.1.mrna1.cds7;Name=FBgn0001235.1;Parent=FBgn0001235.1.mrna1;Target=FBgn0001235.1 911 960 +
Chr1	stalkie_big_nohaplotig	mRNA	151955238	151955969	.	+	.	ID=FBgn0052521.2.mrna1;Name=FBgn0052521.2;Parent=FBgn0052521.2.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=732;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	151955238	151955969	100	+	.	ID=FBgn0052521.2.mrna1.exon1;Name=FBgn0052521.2;Parent=FBgn0052521.2.mrna1;Target=FBgn0052521.2 732 1 .
Chr1	stalkie_big_nohaplotig	CDS	151955238	151955969	100	+	0	ID=FBgn0052521.2.mrna1.cds1;Name=FBgn0052521.2;Parent=FBgn0052521.2.mrna1;Target=FBgn0052521.2 732 1 .
Chr2	stalkie_big_nohaplotig	mRNA	54911993	54928442	.	+	.	ID=FBgn0020236.1.mrna1;Name=FBgn0020236.1;Parent=FBgn0020236.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=3317;mismatches=7;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	54911993	54912166	100	+	.	ID=FBgn0020236.1.mrna1.exon1;Name=FBgn0020236.1;Parent=FBgn0020236.1.mrna1;Target=FBgn0020236.1 1 174 +
Chr2	stalkie_big_nohaplotig	exon	54922788	54922973	100	+	.	ID=FBgn0020236.1.mrna1.exon2;Name=FBgn0020236.1;Parent=FBgn0020236.1.mrna1;Target=FBgn0020236.1 175 360 +
Chr2	stalkie_big_nohaplotig	exon	54923051	54923503	99	+	.	ID=FBgn0020236.1.mrna1.exon3;Name=FBgn0020236.1;Parent=FBgn0020236.1.mrna1;Target=FBgn0020236.1 361 813 +
Chr2	stalkie_big_nohaplotig	exon	54924384	54924657	99	+	.	ID=FBgn0020236.1.mrna1.exon4;Name=FBgn0020236.1;Parent=FBgn0020236.1.mrna1;Target=FBgn0020236.1 814 1087 +
Chr2	stalkie_big_nohaplotig	exon	54924722	54925033	100	+	.	ID=FBgn0020236.1.mrna1.exon5;Name=FBgn0020236.1;Parent=FBgn0020236.1.mrna1;Target=FBgn0020236.1 1088 1399 +
Chr2	stalkie_big_nohaplotig	exon	54925573	54925756	100	+	.	ID=FBgn0020236.1.mrna1.exon6;Name=FBgn0020236.1;Parent=FBgn0020236.1.mrna1;Target=FBgn0020236.1 1400 1583 +
Chr2	stalkie_big_nohaplotig	exon	54925822	54927055	99	+	.	ID=FBgn0020236.1.mrna1.exon7;Name=FBgn0020236.1;Parent=FBgn0020236.1.mrna1;Target=FBgn0020236.1 1584 2817 +
Chr2	stalkie_big_nohaplotig	exon	54927870	54928210	100	+	.	ID=FBgn0020236.1.mrna1.exon8;Name=FBgn0020236.1;Parent=FBgn0020236.1.mrna1;Target=FBgn0020236.1 2818 3158 +
Chr2	stalkie_big_nohaplotig	exon	54928277	54928442	100	+	.	ID=FBgn0020236.1.mrna1.exon9;Name=FBgn0020236.1;Parent=FBgn0020236.1.mrna1;Target=FBgn0020236.1 3159 3324 +
Chr2	stalkie_big_nohaplotig	CDS	54911993	54912166	100	+	0	ID=FBgn0020236.1.mrna1.cds1;Name=FBgn0020236.1;Parent=FBgn0020236.1.mrna1;Target=FBgn0020236.1 1 174 +
Chr2	stalkie_big_nohaplotig	CDS	54922788	54922973	100	+	0	ID=FBgn0020236.1.mrna1.cds2;Name=FBgn0020236.1;Parent=FBgn0020236.1.mrna1;Target=FBgn0020236.1 175 360 +
Chr2	stalkie_big_nohaplotig	CDS	54923051	54923503	99	+	0	ID=FBgn0020236.1.mrna1.cds3;Name=FBgn0020236.1;Parent=FBgn0020236.1.mrna1;Target=FBgn0020236.1 361 813 +
Chr2	stalkie_big_nohaplotig	CDS	54924384	54924657	99	+	0	ID=FBgn0020236.1.mrna1.cds4;Name=FBgn0020236.1;Parent=FBgn0020236.1.mrna1;Target=FBgn0020236.1 814 1087 +
Chr2	stalkie_big_nohaplotig	CDS	54924722	54925033	100	+	1	ID=FBgn0020236.1.mrna1.cds5;Name=FBgn0020236.1;Parent=FBgn0020236.1.mrna1;Target=FBgn0020236.1 1088 1399 +
Chr2	stalkie_big_nohaplotig	CDS	54925573	54925756	100	+	1	ID=FBgn0020236.1.mrna1.cds6;Name=FBgn0020236.1;Parent=FBgn0020236.1.mrna1;Target=FBgn0020236.1 1400 1583 +
Chr2	stalkie_big_nohaplotig	CDS	54925822	54927055	99	+	2	ID=FBgn0020236.1.mrna1.cds7;Name=FBgn0020236.1;Parent=FBgn0020236.1.mrna1;Target=FBgn0020236.1 1584 2817 +
Chr2	stalkie_big_nohaplotig	CDS	54927870	54928210	100	+	0	ID=FBgn0020236.1.mrna1.cds8;Name=FBgn0020236.1;Parent=FBgn0020236.1.mrna1;Target=FBgn0020236.1 2818 3158 +
Chr2	stalkie_big_nohaplotig	CDS	54928277	54928442	100	+	2	ID=FBgn0020236.1.mrna1.cds9;Name=FBgn0020236.1;Parent=FBgn0020236.1.mrna1;Target=FBgn0020236.1 3159 3324 +
ChrX	stalkie_big_nohaplotig	mRNA	86446114	86454454	.	-	.	ID=ORF533.mrna1;Name=ORF533;Parent=ORF533.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1677;mismatches=6;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	86453680	86454454	99	-	.	ID=ORF533.mrna1.exon1;Name=ORF533;Parent=ORF533.mrna1;Target=ORF533 1 775 +
ChrX	stalkie_big_nohaplotig	exon	86453421	86453573	100	-	.	ID=ORF533.mrna1.exon2;Name=ORF533;Parent=ORF533.mrna1;Target=ORF533 776 928 +
ChrX	stalkie_big_nohaplotig	exon	86450688	86450807	100	-	.	ID=ORF533.mrna1.exon3;Name=ORF533;Parent=ORF533.mrna1;Target=ORF533 929 1048 +
ChrX	stalkie_big_nohaplotig	exon	86450474	86450584	100	-	.	ID=ORF533.mrna1.exon4;Name=ORF533;Parent=ORF533.mrna1;Target=ORF533 1049 1159 +
ChrX	stalkie_big_nohaplotig	exon	86449986	86450105	100	-	.	ID=ORF533.mrna1.exon5;Name=ORF533;Parent=ORF533.mrna1;Target=ORF533 1160 1279 +
ChrX	stalkie_big_nohaplotig	exon	86446481	86446600	100	-	.	ID=ORF533.mrna1.exon6;Name=ORF533;Parent=ORF533.mrna1;Target=ORF533 1280 1399 +
ChrX	stalkie_big_nohaplotig	exon	86446114	86446397	100	-	.	ID=ORF533.mrna1.exon7;Name=ORF533;Parent=ORF533.mrna1;Target=ORF533 1400 1683 +
ChrX	stalkie_big_nohaplotig	CDS	86453680	86454454	99	-	0	ID=ORF533.mrna1.cds1;Name=ORF533;Parent=ORF533.mrna1;Target=ORF533 1 775 +
ChrX	stalkie_big_nohaplotig	CDS	86453421	86453573	100	-	1	ID=ORF533.mrna1.cds2;Name=ORF533;Parent=ORF533.mrna1;Target=ORF533 776 928 +
ChrX	stalkie_big_nohaplotig	CDS	86450688	86450807	100	-	1	ID=ORF533.mrna1.cds3;Name=ORF533;Parent=ORF533.mrna1;Target=ORF533 929 1048 +
ChrX	stalkie_big_nohaplotig	CDS	86450474	86450584	100	-	1	ID=ORF533.mrna1.cds4;Name=ORF533;Parent=ORF533.mrna1;Target=ORF533 1049 1159 +
ChrX	stalkie_big_nohaplotig	CDS	86449986	86450105	100	-	1	ID=ORF533.mrna1.cds5;Name=ORF533;Parent=ORF533.mrna1;Target=ORF533 1160 1279 +
ChrX	stalkie_big_nohaplotig	CDS	86446481	86446600	100	-	1	ID=ORF533.mrna1.cds6;Name=ORF533;Parent=ORF533.mrna1;Target=ORF533 1280 1399 +
ChrX	stalkie_big_nohaplotig	CDS	86446114	86446397	100	-	1	ID=ORF533.mrna1.cds7;Name=ORF533;Parent=ORF533.mrna1;Target=ORF533 1400 1683 +
Chr2	stalkie_big_nohaplotig	mRNA	9161961	9193049	.	-	.	ID=FBgn0001332.1.mrna1;Name=FBgn0001332.1;Parent=FBgn0001332.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=1725;mismatches=9;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	9192828	9193049	100	-	.	ID=FBgn0001332.1.mrna1.exon1;Name=FBgn0001332.1;Parent=FBgn0001332.1.mrna1;Target=FBgn0001332.1 1 222 +
Chr2	stalkie_big_nohaplotig	exon	9163055	9164300	99	-	.	ID=FBgn0001332.1.mrna1.exon2;Name=FBgn0001332.1;Parent=FBgn0001332.1.mrna1;Target=FBgn0001332.1 223 1468 +
Chr2	stalkie_big_nohaplotig	exon	9162131	9162285	100	-	.	ID=FBgn0001332.1.mrna1.exon3;Name=FBgn0001332.1;Parent=FBgn0001332.1.mrna1;Target=FBgn0001332.1 1469 1623 +
Chr2	stalkie_big_nohaplotig	exon	9161961	9162071	98	-	.	ID=FBgn0001332.1.mrna1.exon4;Name=FBgn0001332.1;Parent=FBgn0001332.1.mrna1;Target=FBgn0001332.1 1624 1734 +
Chr2	stalkie_big_nohaplotig	CDS	9192828	9193049	100	-	0	ID=FBgn0001332.1.mrna1.cds1;Name=FBgn0001332.1;Parent=FBgn0001332.1.mrna1;Target=FBgn0001332.1 1 222 +
Chr2	stalkie_big_nohaplotig	CDS	9163055	9164300	99	-	0	ID=FBgn0001332.1.mrna1.cds2;Name=FBgn0001332.1;Parent=FBgn0001332.1.mrna1;Target=FBgn0001332.1 223 1468 +
Chr2	stalkie_big_nohaplotig	CDS	9162131	9162285	100	-	1	ID=FBgn0001332.1.mrna1.cds3;Name=FBgn0001332.1;Parent=FBgn0001332.1.mrna1;Target=FBgn0001332.1 1469 1623 +
Chr2	stalkie_big_nohaplotig	CDS	9161961	9162071	98	-	0	ID=FBgn0001332.1.mrna1.cds4;Name=FBgn0001332.1;Parent=FBgn0001332.1.mrna1;Target=FBgn0001332.1 1624 1734 +
ChrX	stalkie_big_nohaplotig	mRNA	95476241	95477169	.	+	.	ID=FBgn0032292.2.mrna1;Name=FBgn0032292.2;Parent=FBgn0032292.2.path1;Dir=sensecoverage=100.0;identity=99.8;matches=865;mismatches=2;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	95476241	95476491	99	+	.	ID=FBgn0032292.2.mrna1.exon1;Name=FBgn0032292.2;Parent=FBgn0032292.2.mrna1;Target=FBgn0032292.2 1 251 +
ChrX	stalkie_big_nohaplotig	exon	95476554	95477169	100	+	.	ID=FBgn0032292.2.mrna1.exon2;Name=FBgn0032292.2;Parent=FBgn0032292.2.mrna1;Target=FBgn0032292.2 252 867 +
ChrX	stalkie_big_nohaplotig	CDS	95476241	95476491	99	+	0	ID=FBgn0032292.2.mrna1.cds1;Name=FBgn0032292.2;Parent=FBgn0032292.2.mrna1;Target=FBgn0032292.2 1 251 +
ChrX	stalkie_big_nohaplotig	CDS	95476554	95477169	100	+	2	ID=FBgn0032292.2.mrna1.cds2;Name=FBgn0032292.2;Parent=FBgn0032292.2.mrna1;Target=FBgn0032292.2 252 867 +
Chr1	stalkie_big_nohaplotig	mRNA	134230055	134233888	.	+	.	ID=FBgn0029128.1.mrna1;Name=FBgn0029128.1;Parent=FBgn0029128.1.path1;Dir=sensecoverage=98.6;identity=99.3;matches=2119;mismatches=16;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	134230055	134231176	99	+	.	ID=FBgn0029128.1.mrna1.exon1;Name=FBgn0029128.1;Parent=FBgn0029128.1.mrna1;Target=FBgn0029128.1 32 1153 +
Chr1	stalkie_big_nohaplotig	exon	134232522	134232697	100	+	.	ID=FBgn0029128.1.mrna1.exon2;Name=FBgn0029128.1;Parent=FBgn0029128.1.mrna1;Target=FBgn0029128.1 1154 1329 +
Chr1	stalkie_big_nohaplotig	exon	134232778	134232852	97	+	.	ID=FBgn0029128.1.mrna1.exon3;Name=FBgn0029128.1;Parent=FBgn0029128.1.mrna1;Target=FBgn0029128.1 1330 1404 +
Chr1	stalkie_big_nohaplotig	exon	134232909	134233107	99	+	.	ID=FBgn0029128.1.mrna1.exon4;Name=FBgn0029128.1;Parent=FBgn0029128.1.mrna1;Target=FBgn0029128.1 1405 1603 +
Chr1	stalkie_big_nohaplotig	exon	134233166	134233460	98	+	.	ID=FBgn0029128.1.mrna1.exon5;Name=FBgn0029128.1;Parent=FBgn0029128.1.mrna1;Target=FBgn0029128.1 1604 1898 +
Chr1	stalkie_big_nohaplotig	exon	134233550	134233668	100	+	.	ID=FBgn0029128.1.mrna1.exon6;Name=FBgn0029128.1;Parent=FBgn0029128.1.mrna1;Target=FBgn0029128.1 1899 2017 +
Chr1	stalkie_big_nohaplotig	exon	134233740	134233888	100	+	.	ID=FBgn0029128.1.mrna1.exon7;Name=FBgn0029128.1;Parent=FBgn0029128.1.mrna1;Target=FBgn0029128.1 2018 2166 +
Chr1	stalkie_big_nohaplotig	CDS	134230057	134231176	99	+	0	ID=FBgn0029128.1.mrna1.cds1;Name=FBgn0029128.1;Parent=FBgn0029128.1.mrna1;Target=FBgn0029128.1 34 1153 +
Chr1	stalkie_big_nohaplotig	CDS	134232522	134232697	100	+	1	ID=FBgn0029128.1.mrna1.cds2;Name=FBgn0029128.1;Parent=FBgn0029128.1.mrna1;Target=FBgn0029128.1 1154 1329 +
Chr1	stalkie_big_nohaplotig	CDS	134232778	134232852	97	+	0	ID=FBgn0029128.1.mrna1.cds3;Name=FBgn0029128.1;Parent=FBgn0029128.1.mrna1;Target=FBgn0029128.1 1330 1404 +
Chr1	stalkie_big_nohaplotig	CDS	134232909	134233107	99	+	0	ID=FBgn0029128.1.mrna1.cds4;Name=FBgn0029128.1;Parent=FBgn0029128.1.mrna1;Target=FBgn0029128.1 1405 1603 +
Chr1	stalkie_big_nohaplotig	CDS	134233166	134233460	98	+	1	ID=FBgn0029128.1.mrna1.cds5;Name=FBgn0029128.1;Parent=FBgn0029128.1.mrna1;Target=FBgn0029128.1 1604 1898 +
Chr1	stalkie_big_nohaplotig	CDS	134233550	134233668	100	+	2	ID=FBgn0029128.1.mrna1.cds6;Name=FBgn0029128.1;Parent=FBgn0029128.1.mrna1;Target=FBgn0029128.1 1899 2017 +
Chr1	stalkie_big_nohaplotig	CDS	134233740	134233888	100	+	1	ID=FBgn0029128.1.mrna1.cds7;Name=FBgn0029128.1;Parent=FBgn0029128.1.mrna1;Target=FBgn0029128.1 2018 2166 +
Chr1	stalkie_big_nohaplotig	mRNA	90129206	90140650	.	+	.	ID=FBgn0040089.mrna1;Name=FBgn0040089;Parent=FBgn0040089.path1;Dir=sensecoverage=100.0;identity=99.9;matches=923;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	90129206	90129762	100	+	.	ID=FBgn0040089.mrna1.exon1;Name=FBgn0040089;Parent=FBgn0040089.mrna1;Target=FBgn0040089 1 557 +
Chr1	stalkie_big_nohaplotig	exon	90129840	90129908	98	+	.	ID=FBgn0040089.mrna1.exon2;Name=FBgn0040089;Parent=FBgn0040089.mrna1;Target=FBgn0040089 558 626 +
Chr1	stalkie_big_nohaplotig	exon	90140353	90140650	100	+	.	ID=FBgn0040089.mrna1.exon3;Name=FBgn0040089;Parent=FBgn0040089.mrna1;Target=FBgn0040089 627 924 +
Chr1	stalkie_big_nohaplotig	CDS	90129206	90129762	100	+	0	ID=FBgn0040089.mrna1.cds1;Name=FBgn0040089;Parent=FBgn0040089.mrna1;Target=FBgn0040089 1 557 +
Chr1	stalkie_big_nohaplotig	CDS	90129840	90129908	98	+	2	ID=FBgn0040089.mrna1.cds2;Name=FBgn0040089;Parent=FBgn0040089.mrna1;Target=FBgn0040089 558 626 +
Chr1	stalkie_big_nohaplotig	CDS	90140353	90140650	100	+	2	ID=FBgn0040089.mrna1.cds3;Name=FBgn0040089;Parent=FBgn0040089.mrna1;Target=FBgn0040089 627 924 +
Chr1	stalkie_big_nohaplotig	mRNA	146666558	146732531	.	-	.	ID=FBgn0030617.1.mrna1;Name=FBgn0030617.1;Parent=FBgn0030617.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=2753;mismatches=10;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	146732429	146732531	100	-	.	ID=FBgn0030617.1.mrna1.exon1;Name=FBgn0030617.1;Parent=FBgn0030617.1.mrna1;Target=FBgn0030617.1 1 103 +
Chr1	stalkie_big_nohaplotig	exon	146692715	146692891	99	-	.	ID=FBgn0030617.1.mrna1.exon2;Name=FBgn0030617.1;Parent=FBgn0030617.1.mrna1;Target=FBgn0030617.1 104 280 +
Chr1	stalkie_big_nohaplotig	exon	146674134	146674346	99	-	.	ID=FBgn0030617.1.mrna1.exon3;Name=FBgn0030617.1;Parent=FBgn0030617.1.mrna1;Target=FBgn0030617.1 281 493 +
Chr1	stalkie_big_nohaplotig	exon	146672410	146673228	99	-	.	ID=FBgn0030617.1.mrna1.exon4;Name=FBgn0030617.1;Parent=FBgn0030617.1.mrna1;Target=FBgn0030617.1 494 1312 +
Chr1	stalkie_big_nohaplotig	exon	146671466	146671645	98	-	.	ID=FBgn0030617.1.mrna1.exon5;Name=FBgn0030617.1;Parent=FBgn0030617.1.mrna1;Target=FBgn0030617.1 1313 1492 +
Chr1	stalkie_big_nohaplotig	exon	146670937	146671302	100	-	.	ID=FBgn0030617.1.mrna1.exon6;Name=FBgn0030617.1;Parent=FBgn0030617.1.mrna1;Target=FBgn0030617.1 1493 1858 +
Chr1	stalkie_big_nohaplotig	exon	146670411	146670867	100	-	.	ID=FBgn0030617.1.mrna1.exon7;Name=FBgn0030617.1;Parent=FBgn0030617.1.mrna1;Target=FBgn0030617.1 1859 2315 +
Chr1	stalkie_big_nohaplotig	exon	146668628	146668729	100	-	.	ID=FBgn0030617.1.mrna1.exon8;Name=FBgn0030617.1;Parent=FBgn0030617.1.mrna1;Target=FBgn0030617.1 2316 2417 +
Chr1	stalkie_big_nohaplotig	exon	146668405	146668563	100	-	.	ID=FBgn0030617.1.mrna1.exon9;Name=FBgn0030617.1;Parent=FBgn0030617.1.mrna1;Target=FBgn0030617.1 2418 2576 +
Chr1	stalkie_big_nohaplotig	exon	146667049	146667116	100	-	.	ID=FBgn0030617.1.mrna1.exon10;Name=FBgn0030617.1;Parent=FBgn0030617.1.mrna1;Target=FBgn0030617.1 2577 2644 +
Chr1	stalkie_big_nohaplotig	exon	146666558	146666676	99	-	.	ID=FBgn0030617.1.mrna1.exon11;Name=FBgn0030617.1;Parent=FBgn0030617.1.mrna1;Target=FBgn0030617.1 2645 2763 +
Chr1	stalkie_big_nohaplotig	CDS	146732429	146732531	100	-	0	ID=FBgn0030617.1.mrna1.cds1;Name=FBgn0030617.1;Parent=FBgn0030617.1.mrna1;Target=FBgn0030617.1 1 103 +
Chr1	stalkie_big_nohaplotig	CDS	146692715	146692891	99	-	1	ID=FBgn0030617.1.mrna1.cds2;Name=FBgn0030617.1;Parent=FBgn0030617.1.mrna1;Target=FBgn0030617.1 104 280 +
Chr1	stalkie_big_nohaplotig	CDS	146674134	146674346	99	-	1	ID=FBgn0030617.1.mrna1.cds3;Name=FBgn0030617.1;Parent=FBgn0030617.1.mrna1;Target=FBgn0030617.1 281 493 +
Chr1	stalkie_big_nohaplotig	CDS	146672410	146673228	99	-	1	ID=FBgn0030617.1.mrna1.cds4;Name=FBgn0030617.1;Parent=FBgn0030617.1.mrna1;Target=FBgn0030617.1 494 1312 +
Chr1	stalkie_big_nohaplotig	CDS	146671466	146671645	98	-	1	ID=FBgn0030617.1.mrna1.cds5;Name=FBgn0030617.1;Parent=FBgn0030617.1.mrna1;Target=FBgn0030617.1 1313 1492 +
Chr1	stalkie_big_nohaplotig	CDS	146670937	146671302	100	-	1	ID=FBgn0030617.1.mrna1.cds6;Name=FBgn0030617.1;Parent=FBgn0030617.1.mrna1;Target=FBgn0030617.1 1493 1858 +
Chr1	stalkie_big_nohaplotig	CDS	146670411	146670867	100	-	1	ID=FBgn0030617.1.mrna1.cds7;Name=FBgn0030617.1;Parent=FBgn0030617.1.mrna1;Target=FBgn0030617.1 1859 2315 +
Chr1	stalkie_big_nohaplotig	CDS	146668628	146668729	100	-	2	ID=FBgn0030617.1.mrna1.cds8;Name=FBgn0030617.1;Parent=FBgn0030617.1.mrna1;Target=FBgn0030617.1 2316 2417 +
Chr1	stalkie_big_nohaplotig	CDS	146668405	146668563	100	-	2	ID=FBgn0030617.1.mrna1.cds9;Name=FBgn0030617.1;Parent=FBgn0030617.1.mrna1;Target=FBgn0030617.1 2418 2576 +
Chr1	stalkie_big_nohaplotig	CDS	146667049	146667116	100	-	2	ID=FBgn0030617.1.mrna1.cds10;Name=FBgn0030617.1;Parent=FBgn0030617.1.mrna1;Target=FBgn0030617.1 2577 2644 +
Chr1	stalkie_big_nohaplotig	CDS	146666558	146666676	99	-	1	ID=FBgn0030617.1.mrna1.cds11;Name=FBgn0030617.1;Parent=FBgn0030617.1.mrna1;Target=FBgn0030617.1 2645 2763 +
Chr1	stalkie_big_nohaplotig	mRNA	53321838	53348216	.	-	.	ID=FBgn0086708.1.mrna1;Name=FBgn0086708.1;Parent=FBgn0086708.1.path1;Dir=sensecoverage=100.0;identity=98.7;matches=1937;mismatches=7;indels=18;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	53347947	53348216	100	-	.	ID=FBgn0086708.1.mrna1.exon1;Name=FBgn0086708.1;Parent=FBgn0086708.1.mrna1;Target=FBgn0086708.1 1 270 +
Chr1	stalkie_big_nohaplotig	exon	53323479	53323590	100	-	.	ID=FBgn0086708.1.mrna1.exon2;Name=FBgn0086708.1;Parent=FBgn0086708.1.mrna1;Target=FBgn0086708.1 271 382 +
Chr1	stalkie_big_nohaplotig	exon	53321838	53323417	98	-	.	ID=FBgn0086708.1.mrna1.exon3;Name=FBgn0086708.1;Parent=FBgn0086708.1.mrna1;Target=FBgn0086708.1 383 1944 +
Chr1	stalkie_big_nohaplotig	CDS	53347947	53348216	100	-	0	ID=FBgn0086708.1.mrna1.cds1;Name=FBgn0086708.1;Parent=FBgn0086708.1.mrna1;Target=FBgn0086708.1 1 270 +
Chr1	stalkie_big_nohaplotig	CDS	53323479	53323590	100	-	0	ID=FBgn0086708.1.mrna1.cds2;Name=FBgn0086708.1;Parent=FBgn0086708.1.mrna1;Target=FBgn0086708.1 271 382 +
Chr1	stalkie_big_nohaplotig	CDS	53321838	53323417	98	-	1	ID=FBgn0086708.1.mrna1.cds3;Name=FBgn0086708.1;Parent=FBgn0086708.1.mrna1;Target=FBgn0086708.1 383 1944 +
Chr1	stalkie_big_nohaplotig	mRNA	161738974	161747679	.	-	.	ID=FBgn0004924.1.mrna1;Name=FBgn0004924.1;Parent=FBgn0004924.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2886;mismatches=6;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	161747638	161747679	100	-	.	ID=FBgn0004924.1.mrna1.exon1;Name=FBgn0004924.1;Parent=FBgn0004924.1.mrna1;Target=FBgn0004924.1 1 42 +
Chr1	stalkie_big_nohaplotig	exon	161743059	161743216	100	-	.	ID=FBgn0004924.1.mrna1.exon2;Name=FBgn0004924.1;Parent=FBgn0004924.1.mrna1;Target=FBgn0004924.1 43 200 +
Chr1	stalkie_big_nohaplotig	exon	161742003	161742927	99	-	.	ID=FBgn0004924.1.mrna1.exon3;Name=FBgn0004924.1;Parent=FBgn0004924.1.mrna1;Target=FBgn0004924.1 201 1125 +
Chr1	stalkie_big_nohaplotig	exon	161741567	161741658	100	-	.	ID=FBgn0004924.1.mrna1.exon4;Name=FBgn0004924.1;Parent=FBgn0004924.1.mrna1;Target=FBgn0004924.1 1126 1217 +
Chr1	stalkie_big_nohaplotig	exon	161740127	161741256	100	-	.	ID=FBgn0004924.1.mrna1.exon5;Name=FBgn0004924.1;Parent=FBgn0004924.1.mrna1;Target=FBgn0004924.1 1218 2347 +
Chr1	stalkie_big_nohaplotig	exon	161739789	161740039	100	-	.	ID=FBgn0004924.1.mrna1.exon6;Name=FBgn0004924.1;Parent=FBgn0004924.1.mrna1;Target=FBgn0004924.1 2348 2598 +
Chr1	stalkie_big_nohaplotig	exon	161739530	161739723	100	-	.	ID=FBgn0004924.1.mrna1.exon7;Name=FBgn0004924.1;Parent=FBgn0004924.1.mrna1;Target=FBgn0004924.1 2599 2792 +
Chr1	stalkie_big_nohaplotig	exon	161738974	161739073	100	-	.	ID=FBgn0004924.1.mrna1.exon8;Name=FBgn0004924.1;Parent=FBgn0004924.1.mrna1;Target=FBgn0004924.1 2793 2892 +
Chr1	stalkie_big_nohaplotig	CDS	161747638	161747679	100	-	0	ID=FBgn0004924.1.mrna1.cds1;Name=FBgn0004924.1;Parent=FBgn0004924.1.mrna1;Target=FBgn0004924.1 1 42 +
Chr1	stalkie_big_nohaplotig	CDS	161743059	161743216	100	-	0	ID=FBgn0004924.1.mrna1.cds2;Name=FBgn0004924.1;Parent=FBgn0004924.1.mrna1;Target=FBgn0004924.1 43 200 +
Chr1	stalkie_big_nohaplotig	CDS	161742003	161742927	99	-	2	ID=FBgn0004924.1.mrna1.cds3;Name=FBgn0004924.1;Parent=FBgn0004924.1.mrna1;Target=FBgn0004924.1 201 1125 +
Chr1	stalkie_big_nohaplotig	CDS	161741567	161741658	100	-	0	ID=FBgn0004924.1.mrna1.cds4;Name=FBgn0004924.1;Parent=FBgn0004924.1.mrna1;Target=FBgn0004924.1 1126 1217 +
Chr1	stalkie_big_nohaplotig	CDS	161740127	161741256	100	-	2	ID=FBgn0004924.1.mrna1.cds5;Name=FBgn0004924.1;Parent=FBgn0004924.1.mrna1;Target=FBgn0004924.1 1218 2347 +
Chr1	stalkie_big_nohaplotig	CDS	161739789	161740039	100	-	1	ID=FBgn0004924.1.mrna1.cds6;Name=FBgn0004924.1;Parent=FBgn0004924.1.mrna1;Target=FBgn0004924.1 2348 2598 +
Chr1	stalkie_big_nohaplotig	CDS	161739530	161739723	100	-	0	ID=FBgn0004924.1.mrna1.cds7;Name=FBgn0004924.1;Parent=FBgn0004924.1.mrna1;Target=FBgn0004924.1 2599 2792 +
Chr1	stalkie_big_nohaplotig	CDS	161738974	161739073	100	-	2	ID=FBgn0004924.1.mrna1.cds8;Name=FBgn0004924.1;Parent=FBgn0004924.1.mrna1;Target=FBgn0004924.1 2793 2892 +
Chr1	stalkie_big_nohaplotig	mRNA	161775204	161776113	.	+	.	ID=FBgn0031188.2.mrna1;Name=FBgn0031188.2;Parent=FBgn0031188.2.path1;Dir=sensecoverage=100.0;identity=99.2;matches=789;mismatches=6;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	161775204	161775700	98	+	.	ID=FBgn0031188.2.mrna1.exon1;Name=FBgn0031188.2;Parent=FBgn0031188.2.mrna1;Target=FBgn0031188.2 1 497 +
Chr1	stalkie_big_nohaplotig	exon	161775755	161775900	100	+	.	ID=FBgn0031188.2.mrna1.exon2;Name=FBgn0031188.2;Parent=FBgn0031188.2.mrna1;Target=FBgn0031188.2 498 643 +
Chr1	stalkie_big_nohaplotig	exon	161775962	161776113	100	+	.	ID=FBgn0031188.2.mrna1.exon3;Name=FBgn0031188.2;Parent=FBgn0031188.2.mrna1;Target=FBgn0031188.2 644 795 +
Chr1	stalkie_big_nohaplotig	CDS	161775249	161775700	98	+	0	ID=FBgn0031188.2.mrna1.cds1;Name=FBgn0031188.2;Parent=FBgn0031188.2.mrna1;Target=FBgn0031188.2 46 497 +
Chr1	stalkie_big_nohaplotig	CDS	161775755	161775900	100	+	2	ID=FBgn0031188.2.mrna1.cds2;Name=FBgn0031188.2;Parent=FBgn0031188.2.mrna1;Target=FBgn0031188.2 498 643 +
Chr1	stalkie_big_nohaplotig	CDS	161775962	161776113	100	+	1	ID=FBgn0031188.2.mrna1.cds3;Name=FBgn0031188.2;Parent=FBgn0031188.2.mrna1;Target=FBgn0031188.2 644 795 +
Chr2	stalkie_big_nohaplotig	mRNA	6809191	6815227	.	+	.	ID=FBgn0026533.1.mrna1;Name=FBgn0026533.1;Parent=FBgn0026533.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1777;mismatches=1;indels=0;unknowns=4
Chr2	stalkie_big_nohaplotig	exon	6809191	6809250	100	+	.	ID=FBgn0026533.1.mrna1.exon1;Name=FBgn0026533.1;Parent=FBgn0026533.1.mrna1;Target=FBgn0026533.1 1 60 +
Chr2	stalkie_big_nohaplotig	exon	6809868	6810072	99	+	.	ID=FBgn0026533.1.mrna1.exon2;Name=FBgn0026533.1;Parent=FBgn0026533.1.mrna1;Target=FBgn0026533.1 61 265 +
Chr2	stalkie_big_nohaplotig	exon	6811683	6812017	100	+	.	ID=FBgn0026533.1.mrna1.exon3;Name=FBgn0026533.1;Parent=FBgn0026533.1.mrna1;Target=FBgn0026533.1 266 600 +
Chr2	stalkie_big_nohaplotig	exon	6812090	6812264	100	+	.	ID=FBgn0026533.1.mrna1.exon4;Name=FBgn0026533.1;Parent=FBgn0026533.1.mrna1;Target=FBgn0026533.1 601 775 +
Chr2	stalkie_big_nohaplotig	exon	6812342	6812569	100	+	.	ID=FBgn0026533.1.mrna1.exon5;Name=FBgn0026533.1;Parent=FBgn0026533.1.mrna1;Target=FBgn0026533.1 776 1003 +
Chr2	stalkie_big_nohaplotig	exon	6812644	6812747	100	+	.	ID=FBgn0026533.1.mrna1.exon6;Name=FBgn0026533.1;Parent=FBgn0026533.1.mrna1;Target=FBgn0026533.1 1004 1107 +
Chr2	stalkie_big_nohaplotig	exon	6812807	6813124	100	+	.	ID=FBgn0026533.1.mrna1.exon7;Name=FBgn0026533.1;Parent=FBgn0026533.1.mrna1;Target=FBgn0026533.1 1108 1425 +
Chr2	stalkie_big_nohaplotig	exon	6813269	6813356	100	+	.	ID=FBgn0026533.1.mrna1.exon8;Name=FBgn0026533.1;Parent=FBgn0026533.1.mrna1;Target=FBgn0026533.1 1426 1513 +
Chr2	stalkie_big_nohaplotig	exon	6813437	6813540	100	+	.	ID=FBgn0026533.1.mrna1.exon9;Name=FBgn0026533.1;Parent=FBgn0026533.1.mrna1;Target=FBgn0026533.1 1514 1617 +
Chr2	stalkie_big_nohaplotig	exon	6813608	6813760	100	+	.	ID=FBgn0026533.1.mrna1.exon10;Name=FBgn0026533.1;Parent=FBgn0026533.1.mrna1;Target=FBgn0026533.1 1618 1770 +
Chr2	stalkie_big_nohaplotig	exon	6815216	6815227	100	+	.	ID=FBgn0026533.1.mrna1.exon11;Name=FBgn0026533.1;Parent=FBgn0026533.1.mrna1;Target=FBgn0026533.1 1771 1782 +
Chr2	stalkie_big_nohaplotig	CDS	6809191	6809250	100	+	0	ID=FBgn0026533.1.mrna1.cds1;Name=FBgn0026533.1;Parent=FBgn0026533.1.mrna1;Target=FBgn0026533.1 1 60 +
Chr2	stalkie_big_nohaplotig	CDS	6809868	6810072	99	+	0	ID=FBgn0026533.1.mrna1.cds2;Name=FBgn0026533.1;Parent=FBgn0026533.1.mrna1;Target=FBgn0026533.1 61 265 +
Chr2	stalkie_big_nohaplotig	CDS	6811683	6812017	100	+	1	ID=FBgn0026533.1.mrna1.cds3;Name=FBgn0026533.1;Parent=FBgn0026533.1.mrna1;Target=FBgn0026533.1 266 600 +
Chr2	stalkie_big_nohaplotig	CDS	6812090	6812264	100	+	0	ID=FBgn0026533.1.mrna1.cds4;Name=FBgn0026533.1;Parent=FBgn0026533.1.mrna1;Target=FBgn0026533.1 601 775 +
Chr2	stalkie_big_nohaplotig	CDS	6812342	6812569	100	+	1	ID=FBgn0026533.1.mrna1.cds5;Name=FBgn0026533.1;Parent=FBgn0026533.1.mrna1;Target=FBgn0026533.1 776 1003 +
Chr2	stalkie_big_nohaplotig	CDS	6812644	6812747	100	+	1	ID=FBgn0026533.1.mrna1.cds6;Name=FBgn0026533.1;Parent=FBgn0026533.1.mrna1;Target=FBgn0026533.1 1004 1107 +
Chr2	stalkie_big_nohaplotig	CDS	6812807	6813124	100	+	0	ID=FBgn0026533.1.mrna1.cds7;Name=FBgn0026533.1;Parent=FBgn0026533.1.mrna1;Target=FBgn0026533.1 1108 1425 +
Chr2	stalkie_big_nohaplotig	CDS	6813269	6813356	100	+	0	ID=FBgn0026533.1.mrna1.cds8;Name=FBgn0026533.1;Parent=FBgn0026533.1.mrna1;Target=FBgn0026533.1 1426 1513 +
Chr2	stalkie_big_nohaplotig	CDS	6813437	6813540	100	+	1	ID=FBgn0026533.1.mrna1.cds9;Name=FBgn0026533.1;Parent=FBgn0026533.1.mrna1;Target=FBgn0026533.1 1514 1617 +
Chr2	stalkie_big_nohaplotig	CDS	6813608	6813760	100	+	0	ID=FBgn0026533.1.mrna1.cds10;Name=FBgn0026533.1;Parent=FBgn0026533.1.mrna1;Target=FBgn0026533.1 1618 1770 +
Chr2	stalkie_big_nohaplotig	CDS	6815216	6815227	100	+	0	ID=FBgn0026533.1.mrna1.cds11;Name=FBgn0026533.1;Parent=FBgn0026533.1.mrna1;Target=FBgn0026533.1 1771 1782 +
Chr2	stalkie_big_nohaplotig	mRNA	6833255	6833665	.	+	.	ID=FBgn0034902.1.mrna1;Name=FBgn0034902.1;Parent=FBgn0034902.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=354;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	6833255	6833354	100	+	.	ID=FBgn0034902.1.mrna1.exon1;Name=FBgn0034902.1;Parent=FBgn0034902.1.mrna1;Target=FBgn0034902.1 1 100 +
Chr2	stalkie_big_nohaplotig	exon	6833412	6833665	100	+	.	ID=FBgn0034902.1.mrna1.exon2;Name=FBgn0034902.1;Parent=FBgn0034902.1.mrna1;Target=FBgn0034902.1 101 354 +
Chr2	stalkie_big_nohaplotig	CDS	6833255	6833354	100	+	0	ID=FBgn0034902.1.mrna1.cds1;Name=FBgn0034902.1;Parent=FBgn0034902.1.mrna1;Target=FBgn0034902.1 1 100 +
Chr2	stalkie_big_nohaplotig	CDS	6833412	6833665	100	+	1	ID=FBgn0034902.1.mrna1.cds2;Name=FBgn0034902.1;Parent=FBgn0034902.1.mrna1;Target=FBgn0034902.1 101 354 +
Chr2	stalkie_big_nohaplotig	mRNA	43160978	43161388	.	-	.	ID=FBgn0034902.1.mrna2;Name=FBgn0034902.1;Parent=FBgn0034902.1.path2;Dir=sensecoverage=100.0;identity=100.0;matches=354;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	43161289	43161388	100	-	.	ID=FBgn0034902.1.mrna2.exon1;Name=FBgn0034902.1;Parent=FBgn0034902.1.mrna2;Target=FBgn0034902.1 1 100 +
Chr2	stalkie_big_nohaplotig	exon	43160978	43161231	100	-	.	ID=FBgn0034902.1.mrna2.exon2;Name=FBgn0034902.1;Parent=FBgn0034902.1.mrna2;Target=FBgn0034902.1 101 354 +
Chr2	stalkie_big_nohaplotig	CDS	43161289	43161388	100	-	0	ID=FBgn0034902.1.mrna2.cds1;Name=FBgn0034902.1;Parent=FBgn0034902.1.mrna2;Target=FBgn0034902.1 1 100 +
Chr2	stalkie_big_nohaplotig	CDS	43160978	43161231	100	-	1	ID=FBgn0034902.1.mrna2.cds2;Name=FBgn0034902.1;Parent=FBgn0034902.1.mrna2;Target=FBgn0034902.1 101 354 +
Chr2	stalkie_big_nohaplotig	mRNA	67526766	67540224	.	-	.	ID=FBgn0039897.1.mrna1;Name=FBgn0039897.1;Parent=FBgn0039897.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2480;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	67539967	67540224	100	-	.	ID=FBgn0039897.1.mrna1.exon1;Name=FBgn0039897.1;Parent=FBgn0039897.1.mrna1;Target=FBgn0039897.1 1 258 +
Chr2	stalkie_big_nohaplotig	exon	67539042	67539126	100	-	.	ID=FBgn0039897.1.mrna1.exon2;Name=FBgn0039897.1;Parent=FBgn0039897.1.mrna1;Target=FBgn0039897.1 259 343 +
Chr2	stalkie_big_nohaplotig	exon	67538485	67538673	100	-	.	ID=FBgn0039897.1.mrna1.exon3;Name=FBgn0039897.1;Parent=FBgn0039897.1.mrna1;Target=FBgn0039897.1 344 532 +
Chr2	stalkie_big_nohaplotig	exon	67535415	67535630	100	-	.	ID=FBgn0039897.1.mrna1.exon4;Name=FBgn0039897.1;Parent=FBgn0039897.1.mrna1;Target=FBgn0039897.1 533 748 +
Chr2	stalkie_big_nohaplotig	exon	67534099	67534520	100	-	.	ID=FBgn0039897.1.mrna1.exon5;Name=FBgn0039897.1;Parent=FBgn0039897.1.mrna1;Target=FBgn0039897.1 749 1170 +
Chr2	stalkie_big_nohaplotig	exon	67533926	67534040	100	-	.	ID=FBgn0039897.1.mrna1.exon6;Name=FBgn0039897.1;Parent=FBgn0039897.1.mrna1;Target=FBgn0039897.1 1171 1285 +
Chr2	stalkie_big_nohaplotig	exon	67527824	67528321	100	-	.	ID=FBgn0039897.1.mrna1.exon7;Name=FBgn0039897.1;Parent=FBgn0039897.1.mrna1;Target=FBgn0039897.1 1286 1783 +
Chr2	stalkie_big_nohaplotig	exon	67526766	67527463	99	-	.	ID=FBgn0039897.1.mrna1.exon8;Name=FBgn0039897.1;Parent=FBgn0039897.1.mrna1;Target=FBgn0039897.1 1784 2481 +
Chr2	stalkie_big_nohaplotig	CDS	67539967	67540224	100	-	0	ID=FBgn0039897.1.mrna1.cds1;Name=FBgn0039897.1;Parent=FBgn0039897.1.mrna1;Target=FBgn0039897.1 1 258 +
Chr2	stalkie_big_nohaplotig	CDS	67539042	67539126	100	-	0	ID=FBgn0039897.1.mrna1.cds2;Name=FBgn0039897.1;Parent=FBgn0039897.1.mrna1;Target=FBgn0039897.1 259 343 +
Chr2	stalkie_big_nohaplotig	CDS	67538485	67538673	100	-	1	ID=FBgn0039897.1.mrna1.cds3;Name=FBgn0039897.1;Parent=FBgn0039897.1.mrna1;Target=FBgn0039897.1 344 532 +
Chr2	stalkie_big_nohaplotig	CDS	67535415	67535630	100	-	1	ID=FBgn0039897.1.mrna1.cds4;Name=FBgn0039897.1;Parent=FBgn0039897.1.mrna1;Target=FBgn0039897.1 533 748 +
Chr2	stalkie_big_nohaplotig	CDS	67534099	67534520	100	-	1	ID=FBgn0039897.1.mrna1.cds5;Name=FBgn0039897.1;Parent=FBgn0039897.1.mrna1;Target=FBgn0039897.1 749 1170 +
Chr2	stalkie_big_nohaplotig	CDS	67533926	67534040	100	-	0	ID=FBgn0039897.1.mrna1.cds6;Name=FBgn0039897.1;Parent=FBgn0039897.1.mrna1;Target=FBgn0039897.1 1171 1285 +
Chr2	stalkie_big_nohaplotig	CDS	67527824	67528321	100	-	1	ID=FBgn0039897.1.mrna1.cds7;Name=FBgn0039897.1;Parent=FBgn0039897.1.mrna1;Target=FBgn0039897.1 1286 1783 +
Chr2	stalkie_big_nohaplotig	CDS	67526766	67527463	99	-	1	ID=FBgn0039897.1.mrna1.cds8;Name=FBgn0039897.1;Parent=FBgn0039897.1.mrna1;Target=FBgn0039897.1 1784 2481 +
Chr2	stalkie_big_nohaplotig	mRNA	67490652	67504720	.	-	.	ID=FBgn0259216.1.mrna1;Name=FBgn0259216.1;Parent=FBgn0259216.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3203;mismatches=0;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	67502617	67504720	100	-	.	ID=FBgn0259216.1.mrna1.exon1;Name=FBgn0259216.1;Parent=FBgn0259216.1.mrna1;Target=FBgn0259216.1 1 2104 +
Chr2	stalkie_big_nohaplotig	exon	67500015	67500175	100	-	.	ID=FBgn0259216.1.mrna1.exon2;Name=FBgn0259216.1;Parent=FBgn0259216.1.mrna1;Target=FBgn0259216.1 2105 2265 +
Chr2	stalkie_big_nohaplotig	exon	67499687	67499942	100	-	.	ID=FBgn0259216.1.mrna1.exon3;Name=FBgn0259216.1;Parent=FBgn0259216.1.mrna1;Target=FBgn0259216.1 2266 2521 +
Chr2	stalkie_big_nohaplotig	exon	67499476	67499627	100	-	.	ID=FBgn0259216.1.mrna1.exon4;Name=FBgn0259216.1;Parent=FBgn0259216.1.mrna1;Target=FBgn0259216.1 2522 2673 +
Chr2	stalkie_big_nohaplotig	exon	67498958	67499290	100	-	.	ID=FBgn0259216.1.mrna1.exon5;Name=FBgn0259216.1;Parent=FBgn0259216.1.mrna1;Target=FBgn0259216.1 2674 3006 +
Chr2	stalkie_big_nohaplotig	exon	67498741	67498891	100	-	.	ID=FBgn0259216.1.mrna1.exon6;Name=FBgn0259216.1;Parent=FBgn0259216.1.mrna1;Target=FBgn0259216.1 3007 3157 +
Chr2	stalkie_big_nohaplotig	exon	67490652	67490697	97	-	.	ID=FBgn0259216.1.mrna1.exon7;Name=FBgn0259216.1;Parent=FBgn0259216.1.mrna1;Target=FBgn0259216.1 3158 3204 +
Chr2	stalkie_big_nohaplotig	CDS	67502617	67504720	100	-	0	ID=FBgn0259216.1.mrna1.cds1;Name=FBgn0259216.1;Parent=FBgn0259216.1.mrna1;Target=FBgn0259216.1 1 2104 +
Chr2	stalkie_big_nohaplotig	CDS	67500015	67500175	100	-	1	ID=FBgn0259216.1.mrna1.cds2;Name=FBgn0259216.1;Parent=FBgn0259216.1.mrna1;Target=FBgn0259216.1 2105 2265 +
Chr2	stalkie_big_nohaplotig	CDS	67499687	67499942	100	-	0	ID=FBgn0259216.1.mrna1.cds3;Name=FBgn0259216.1;Parent=FBgn0259216.1.mrna1;Target=FBgn0259216.1 2266 2521 +
Chr2	stalkie_big_nohaplotig	CDS	67499476	67499627	100	-	1	ID=FBgn0259216.1.mrna1.cds4;Name=FBgn0259216.1;Parent=FBgn0259216.1.mrna1;Target=FBgn0259216.1 2522 2673 +
Chr2	stalkie_big_nohaplotig	CDS	67498958	67499290	100	-	0	ID=FBgn0259216.1.mrna1.cds5;Name=FBgn0259216.1;Parent=FBgn0259216.1.mrna1;Target=FBgn0259216.1 2674 3006 +
Chr2	stalkie_big_nohaplotig	CDS	67498741	67498891	100	-	0	ID=FBgn0259216.1.mrna1.cds6;Name=FBgn0259216.1;Parent=FBgn0259216.1.mrna1;Target=FBgn0259216.1 3007 3157 +
Chr2	stalkie_big_nohaplotig	CDS	67490652	67490697	97	-	1	ID=FBgn0259216.1.mrna1.cds7;Name=FBgn0259216.1;Parent=FBgn0259216.1.mrna1;Target=FBgn0259216.1 3158 3204 +
Chr2	stalkie_big_nohaplotig	mRNA	125800033	125802663	.	+	.	ID=FBgn0051431.1.mrna1;Name=FBgn0051431.1;Parent=FBgn0051431.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1068;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	125800033	125800150	100	+	.	ID=FBgn0051431.1.mrna1.exon1;Name=FBgn0051431.1;Parent=FBgn0051431.1.mrna1;Target=FBgn0051431.1 1 118 +
Chr2	stalkie_big_nohaplotig	exon	125801589	125801704	100	+	.	ID=FBgn0051431.1.mrna1.exon2;Name=FBgn0051431.1;Parent=FBgn0051431.1.mrna1;Target=FBgn0051431.1 119 234 +
Chr2	stalkie_big_nohaplotig	exon	125801767	125801992	100	+	.	ID=FBgn0051431.1.mrna1.exon3;Name=FBgn0051431.1;Parent=FBgn0051431.1.mrna1;Target=FBgn0051431.1 235 460 +
Chr2	stalkie_big_nohaplotig	exon	125802056	125802663	100	+	.	ID=FBgn0051431.1.mrna1.exon4;Name=FBgn0051431.1;Parent=FBgn0051431.1.mrna1;Target=FBgn0051431.1 461 1068 +
Chr2	stalkie_big_nohaplotig	CDS	125800033	125800150	100	+	0	ID=FBgn0051431.1.mrna1.cds1;Name=FBgn0051431.1;Parent=FBgn0051431.1.mrna1;Target=FBgn0051431.1 1 118 +
Chr2	stalkie_big_nohaplotig	CDS	125801589	125801704	100	+	1	ID=FBgn0051431.1.mrna1.cds2;Name=FBgn0051431.1;Parent=FBgn0051431.1.mrna1;Target=FBgn0051431.1 119 234 +
Chr2	stalkie_big_nohaplotig	CDS	125801767	125801992	100	+	0	ID=FBgn0051431.1.mrna1.cds3;Name=FBgn0051431.1;Parent=FBgn0051431.1.mrna1;Target=FBgn0051431.1 235 460 +
Chr2	stalkie_big_nohaplotig	CDS	125802056	125802663	100	+	1	ID=FBgn0051431.1.mrna1.cds4;Name=FBgn0051431.1;Parent=FBgn0051431.1.mrna1;Target=FBgn0051431.1 461 1068 +
Chr2	stalkie_big_nohaplotig	mRNA	39561098	39561484	.	+	.	ID=FBgn0061362.1.mrna1;Name=FBgn0061362.1;Parent=FBgn0061362.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=327;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	39561098	39561241	100	+	.	ID=FBgn0061362.1.mrna1.exon1;Name=FBgn0061362.1;Parent=FBgn0061362.1.mrna1;Target=FBgn0061362.1 1 144 +
Chr2	stalkie_big_nohaplotig	exon	39561302	39561484	100	+	.	ID=FBgn0061362.1.mrna1.exon2;Name=FBgn0061362.1;Parent=FBgn0061362.1.mrna1;Target=FBgn0061362.1 145 327 +
Chr2	stalkie_big_nohaplotig	CDS	39561098	39561241	100	+	0	ID=FBgn0061362.1.mrna1.cds1;Name=FBgn0061362.1;Parent=FBgn0061362.1.mrna1;Target=FBgn0061362.1 1 144 +
Chr2	stalkie_big_nohaplotig	CDS	39561302	39561484	100	+	0	ID=FBgn0061362.1.mrna1.cds2;Name=FBgn0061362.1;Parent=FBgn0061362.1.mrna1;Target=FBgn0061362.1 145 327 +
Chr2	stalkie_big_nohaplotig	mRNA	140658552	140663608	.	+	.	ID=FBgn0038641.1.mrna1;Name=FBgn0038641.1;Parent=FBgn0038641.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1841;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	140658552	140658726	100	+	.	ID=FBgn0038641.1.mrna1.exon1;Name=FBgn0038641.1;Parent=FBgn0038641.1.mrna1;Target=FBgn0038641.1 1 175 +
Chr2	stalkie_big_nohaplotig	exon	140658817	140658924	100	+	.	ID=FBgn0038641.1.mrna1.exon2;Name=FBgn0038641.1;Parent=FBgn0038641.1.mrna1;Target=FBgn0038641.1 176 283 +
Chr2	stalkie_big_nohaplotig	exon	140660341	140660496	100	+	.	ID=FBgn0038641.1.mrna1.exon3;Name=FBgn0038641.1;Parent=FBgn0038641.1.mrna1;Target=FBgn0038641.1 284 439 +
Chr2	stalkie_big_nohaplotig	exon	140660562	140660860	100	+	.	ID=FBgn0038641.1.mrna1.exon4;Name=FBgn0038641.1;Parent=FBgn0038641.1.mrna1;Target=FBgn0038641.1 440 738 +
Chr2	stalkie_big_nohaplotig	exon	140660976	140661105	100	+	.	ID=FBgn0038641.1.mrna1.exon5;Name=FBgn0038641.1;Parent=FBgn0038641.1.mrna1;Target=FBgn0038641.1 739 868 +
Chr2	stalkie_big_nohaplotig	exon	140661245	140661566	100	+	.	ID=FBgn0038641.1.mrna1.exon6;Name=FBgn0038641.1;Parent=FBgn0038641.1.mrna1;Target=FBgn0038641.1 869 1190 +
Chr2	stalkie_big_nohaplotig	exon	140661642	140661914	99	+	.	ID=FBgn0038641.1.mrna1.exon7;Name=FBgn0038641.1;Parent=FBgn0038641.1.mrna1;Target=FBgn0038641.1 1191 1463 +
Chr2	stalkie_big_nohaplotig	exon	140661985	140662096	100	+	.	ID=FBgn0038641.1.mrna1.exon8;Name=FBgn0038641.1;Parent=FBgn0038641.1.mrna1;Target=FBgn0038641.1 1464 1575 +
Chr2	stalkie_big_nohaplotig	exon	140663342	140663608	100	+	.	ID=FBgn0038641.1.mrna1.exon9;Name=FBgn0038641.1;Parent=FBgn0038641.1.mrna1;Target=FBgn0038641.1 1576 1842 +
Chr2	stalkie_big_nohaplotig	CDS	140658552	140658726	100	+	0	ID=FBgn0038641.1.mrna1.cds1;Name=FBgn0038641.1;Parent=FBgn0038641.1.mrna1;Target=FBgn0038641.1 1 175 +
Chr2	stalkie_big_nohaplotig	CDS	140658817	140658924	100	+	1	ID=FBgn0038641.1.mrna1.cds2;Name=FBgn0038641.1;Parent=FBgn0038641.1.mrna1;Target=FBgn0038641.1 176 283 +
Chr2	stalkie_big_nohaplotig	CDS	140660341	140660496	100	+	1	ID=FBgn0038641.1.mrna1.cds3;Name=FBgn0038641.1;Parent=FBgn0038641.1.mrna1;Target=FBgn0038641.1 284 439 +
Chr2	stalkie_big_nohaplotig	CDS	140660562	140660860	100	+	1	ID=FBgn0038641.1.mrna1.cds4;Name=FBgn0038641.1;Parent=FBgn0038641.1.mrna1;Target=FBgn0038641.1 440 738 +
Chr2	stalkie_big_nohaplotig	CDS	140660976	140661105	100	+	0	ID=FBgn0038641.1.mrna1.cds5;Name=FBgn0038641.1;Parent=FBgn0038641.1.mrna1;Target=FBgn0038641.1 739 868 +
Chr2	stalkie_big_nohaplotig	CDS	140661245	140661566	100	+	1	ID=FBgn0038641.1.mrna1.cds6;Name=FBgn0038641.1;Parent=FBgn0038641.1.mrna1;Target=FBgn0038641.1 869 1190 +
Chr2	stalkie_big_nohaplotig	CDS	140661642	140661914	99	+	2	ID=FBgn0038641.1.mrna1.cds7;Name=FBgn0038641.1;Parent=FBgn0038641.1.mrna1;Target=FBgn0038641.1 1191 1463 +
Chr2	stalkie_big_nohaplotig	CDS	140661985	140662096	100	+	2	ID=FBgn0038641.1.mrna1.cds8;Name=FBgn0038641.1;Parent=FBgn0038641.1.mrna1;Target=FBgn0038641.1 1464 1575 +
Chr2	stalkie_big_nohaplotig	CDS	140663342	140663608	100	+	0	ID=FBgn0038641.1.mrna1.cds9;Name=FBgn0038641.1;Parent=FBgn0038641.1.mrna1;Target=FBgn0038641.1 1576 1842 +
Chr2	stalkie_big_nohaplotig	mRNA	46399051	46420675	.	-	.	ID=FBgn0034542.1.mrna1;Name=FBgn0034542.1;Parent=FBgn0034542.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2095;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	46420415	46420675	100	-	.	ID=FBgn0034542.1.mrna1.exon1;Name=FBgn0034542.1;Parent=FBgn0034542.1.mrna1;Target=FBgn0034542.1 1 261 +
Chr2	stalkie_big_nohaplotig	exon	46403899	46404181	100	-	.	ID=FBgn0034542.1.mrna1.exon2;Name=FBgn0034542.1;Parent=FBgn0034542.1.mrna1;Target=FBgn0034542.1 262 544 +
Chr2	stalkie_big_nohaplotig	exon	46403718	46403830	100	-	.	ID=FBgn0034542.1.mrna1.exon3;Name=FBgn0034542.1;Parent=FBgn0034542.1.mrna1;Target=FBgn0034542.1 545 657 +
Chr2	stalkie_big_nohaplotig	exon	46401907	46402146	99	-	.	ID=FBgn0034542.1.mrna1.exon4;Name=FBgn0034542.1;Parent=FBgn0034542.1.mrna1;Target=FBgn0034542.1 658 897 +
Chr2	stalkie_big_nohaplotig	exon	46401453	46401842	99	-	.	ID=FBgn0034542.1.mrna1.exon5;Name=FBgn0034542.1;Parent=FBgn0034542.1.mrna1;Target=FBgn0034542.1 898 1287 +
Chr2	stalkie_big_nohaplotig	exon	46401203	46401385	99	-	.	ID=FBgn0034542.1.mrna1.exon6;Name=FBgn0034542.1;Parent=FBgn0034542.1.mrna1;Target=FBgn0034542.1 1288 1470 +
Chr2	stalkie_big_nohaplotig	exon	46400921	46401150	99	-	.	ID=FBgn0034542.1.mrna1.exon7;Name=FBgn0034542.1;Parent=FBgn0034542.1.mrna1;Target=FBgn0034542.1 1471 1700 +
Chr2	stalkie_big_nohaplotig	exon	46399480	46399582	100	-	.	ID=FBgn0034542.1.mrna1.exon8;Name=FBgn0034542.1;Parent=FBgn0034542.1.mrna1;Target=FBgn0034542.1 1701 1803 +
Chr2	stalkie_big_nohaplotig	exon	46399284	46399419	99	-	.	ID=FBgn0034542.1.mrna1.exon9;Name=FBgn0034542.1;Parent=FBgn0034542.1.mrna1;Target=FBgn0034542.1 1804 1939 +
Chr2	stalkie_big_nohaplotig	exon	46399051	46399211	100	-	.	ID=FBgn0034542.1.mrna1.exon10;Name=FBgn0034542.1;Parent=FBgn0034542.1.mrna1;Target=FBgn0034542.1 1940 2100 +
Chr2	stalkie_big_nohaplotig	CDS	46420415	46420675	100	-	0	ID=FBgn0034542.1.mrna1.cds1;Name=FBgn0034542.1;Parent=FBgn0034542.1.mrna1;Target=FBgn0034542.1 1 261 +
Chr2	stalkie_big_nohaplotig	CDS	46403899	46404181	100	-	0	ID=FBgn0034542.1.mrna1.cds2;Name=FBgn0034542.1;Parent=FBgn0034542.1.mrna1;Target=FBgn0034542.1 262 544 +
Chr2	stalkie_big_nohaplotig	CDS	46403718	46403830	100	-	1	ID=FBgn0034542.1.mrna1.cds3;Name=FBgn0034542.1;Parent=FBgn0034542.1.mrna1;Target=FBgn0034542.1 545 657 +
Chr2	stalkie_big_nohaplotig	CDS	46401907	46402146	99	-	0	ID=FBgn0034542.1.mrna1.cds4;Name=FBgn0034542.1;Parent=FBgn0034542.1.mrna1;Target=FBgn0034542.1 658 897 +
Chr2	stalkie_big_nohaplotig	CDS	46401453	46401842	99	-	0	ID=FBgn0034542.1.mrna1.cds5;Name=FBgn0034542.1;Parent=FBgn0034542.1.mrna1;Target=FBgn0034542.1 898 1287 +
Chr2	stalkie_big_nohaplotig	CDS	46401203	46401385	99	-	0	ID=FBgn0034542.1.mrna1.cds6;Name=FBgn0034542.1;Parent=FBgn0034542.1.mrna1;Target=FBgn0034542.1 1288 1470 +
Chr2	stalkie_big_nohaplotig	CDS	46400921	46401150	99	-	0	ID=FBgn0034542.1.mrna1.cds7;Name=FBgn0034542.1;Parent=FBgn0034542.1.mrna1;Target=FBgn0034542.1 1471 1700 +
Chr2	stalkie_big_nohaplotig	CDS	46399480	46399582	100	-	2	ID=FBgn0034542.1.mrna1.cds8;Name=FBgn0034542.1;Parent=FBgn0034542.1.mrna1;Target=FBgn0034542.1 1701 1803 +
Chr2	stalkie_big_nohaplotig	CDS	46399284	46399419	99	-	0	ID=FBgn0034542.1.mrna1.cds9;Name=FBgn0034542.1;Parent=FBgn0034542.1.mrna1;Target=FBgn0034542.1 1804 1939 +
Chr2	stalkie_big_nohaplotig	CDS	46399051	46399211	100	-	1	ID=FBgn0034542.1.mrna1.cds10;Name=FBgn0034542.1;Parent=FBgn0034542.1.mrna1;Target=FBgn0034542.1 1940 2100 +
Chr1	stalkie_big_nohaplotig	mRNA	79732194	79734134	.	+	.	ID=AAEL017378.1.mrna2;Name=AAEL017378.1;Parent=AAEL017378.1.path2;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1928;mismatches=13;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	79732194	79734134	99	+	.	ID=AAEL017378.1.mrna2.exon1;Name=AAEL017378.1;Parent=AAEL017378.1.mrna2;Target=AAEL017378.1 1941 1 .
Chr1	stalkie_big_nohaplotig	CDS	79732194	79734134	99	+	0	ID=AAEL017378.1.mrna2.cds1;Name=AAEL017378.1;Parent=AAEL017378.1.mrna2;Target=AAEL017378.1 1941 1 .
Chr1	stalkie_big_nohaplotig	mRNA	59377389	59380949	.	-	.	ID=FBgn0036486.1.mrna1;Name=FBgn0036486.1;Parent=FBgn0036486.1.path1;Dir=sensecoverage=99.9;identity=99.4;matches=2911;mismatches=17;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	59380677	59380949	100	-	.	ID=FBgn0036486.1.mrna1.exon1;Name=FBgn0036486.1;Parent=FBgn0036486.1.mrna1;Target=FBgn0036486.1 1 273 +
Chr1	stalkie_big_nohaplotig	exon	59380404	59380616	99	-	.	ID=FBgn0036486.1.mrna1.exon2;Name=FBgn0036486.1;Parent=FBgn0036486.1.mrna1;Target=FBgn0036486.1 274 486 +
Chr1	stalkie_big_nohaplotig	exon	59380152	59380349	98	-	.	ID=FBgn0036486.1.mrna1.exon3;Name=FBgn0036486.1;Parent=FBgn0036486.1.mrna1;Target=FBgn0036486.1 487 684 +
Chr1	stalkie_big_nohaplotig	exon	59379957	59380091	98	-	.	ID=FBgn0036486.1.mrna1.exon4;Name=FBgn0036486.1;Parent=FBgn0036486.1.mrna1;Target=FBgn0036486.1 685 819 +
Chr1	stalkie_big_nohaplotig	exon	59379133	59379897	99	-	.	ID=FBgn0036486.1.mrna1.exon5;Name=FBgn0036486.1;Parent=FBgn0036486.1.mrna1;Target=FBgn0036486.1 820 1584 +
Chr1	stalkie_big_nohaplotig	exon	59378872	59379024	99	-	.	ID=FBgn0036486.1.mrna1.exon6;Name=FBgn0036486.1;Parent=FBgn0036486.1.mrna1;Target=FBgn0036486.1 1585 1737 +
Chr1	stalkie_big_nohaplotig	exon	59378519	59378818	98	-	.	ID=FBgn0036486.1.mrna1.exon7;Name=FBgn0036486.1;Parent=FBgn0036486.1.mrna1;Target=FBgn0036486.1 1738 2037 +
Chr1	stalkie_big_nohaplotig	exon	59378053	59378457	99	-	.	ID=FBgn0036486.1.mrna1.exon8;Name=FBgn0036486.1;Parent=FBgn0036486.1.mrna1;Target=FBgn0036486.1 2038 2442 +
Chr1	stalkie_big_nohaplotig	exon	59377814	59377991	99	-	.	ID=FBgn0036486.1.mrna1.exon9;Name=FBgn0036486.1;Parent=FBgn0036486.1.mrna1;Target=FBgn0036486.1 2443 2620 +
Chr1	stalkie_big_nohaplotig	exon	59377599	59377750	100	-	.	ID=FBgn0036486.1.mrna1.exon10;Name=FBgn0036486.1;Parent=FBgn0036486.1.mrna1;Target=FBgn0036486.1 2621 2772 +
Chr1	stalkie_big_nohaplotig	exon	59377389	59377544	99	-	.	ID=FBgn0036486.1.mrna1.exon11;Name=FBgn0036486.1;Parent=FBgn0036486.1.mrna1;Target=FBgn0036486.1 2773 2928 +
Chr1	stalkie_big_nohaplotig	CDS	59380677	59380949	100	-	0	ID=FBgn0036486.1.mrna1.cds1;Name=FBgn0036486.1;Parent=FBgn0036486.1.mrna1;Target=FBgn0036486.1 1 273 +
Chr1	stalkie_big_nohaplotig	CDS	59380404	59380616	99	-	0	ID=FBgn0036486.1.mrna1.cds2;Name=FBgn0036486.1;Parent=FBgn0036486.1.mrna1;Target=FBgn0036486.1 274 486 +
Chr1	stalkie_big_nohaplotig	CDS	59380152	59380349	98	-	0	ID=FBgn0036486.1.mrna1.cds3;Name=FBgn0036486.1;Parent=FBgn0036486.1.mrna1;Target=FBgn0036486.1 487 684 +
Chr1	stalkie_big_nohaplotig	CDS	59379957	59380091	98	-	0	ID=FBgn0036486.1.mrna1.cds4;Name=FBgn0036486.1;Parent=FBgn0036486.1.mrna1;Target=FBgn0036486.1 685 819 +
Chr1	stalkie_big_nohaplotig	CDS	59379133	59379897	99	-	0	ID=FBgn0036486.1.mrna1.cds5;Name=FBgn0036486.1;Parent=FBgn0036486.1.mrna1;Target=FBgn0036486.1 820 1584 +
Chr1	stalkie_big_nohaplotig	CDS	59378872	59379024	99	-	0	ID=FBgn0036486.1.mrna1.cds6;Name=FBgn0036486.1;Parent=FBgn0036486.1.mrna1;Target=FBgn0036486.1 1585 1737 +
Chr1	stalkie_big_nohaplotig	CDS	59378519	59378818	98	-	0	ID=FBgn0036486.1.mrna1.cds7;Name=FBgn0036486.1;Parent=FBgn0036486.1.mrna1;Target=FBgn0036486.1 1738 2037 +
Chr1	stalkie_big_nohaplotig	CDS	59378053	59378457	99	-	0	ID=FBgn0036486.1.mrna1.cds8;Name=FBgn0036486.1;Parent=FBgn0036486.1.mrna1;Target=FBgn0036486.1 2038 2442 +
Chr1	stalkie_big_nohaplotig	CDS	59377814	59377991	99	-	0	ID=FBgn0036486.1.mrna1.cds9;Name=FBgn0036486.1;Parent=FBgn0036486.1.mrna1;Target=FBgn0036486.1 2443 2620 +
Chr1	stalkie_big_nohaplotig	CDS	59377599	59377750	100	-	1	ID=FBgn0036486.1.mrna1.cds10;Name=FBgn0036486.1;Parent=FBgn0036486.1.mrna1;Target=FBgn0036486.1 2621 2772 +
Chr1	stalkie_big_nohaplotig	CDS	59377389	59377544	99	-	0	ID=FBgn0036486.1.mrna1.cds11;Name=FBgn0036486.1;Parent=FBgn0036486.1.mrna1;Target=FBgn0036486.1 2773 2928 +
Chr1	stalkie_big_nohaplotig	mRNA	59385604	59388578	.	-	.	ID=FBgn0036489.1.mrna1;Name=FBgn0036489.1;Parent=FBgn0036489.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1141;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	59388467	59388578	100	-	.	ID=FBgn0036489.1.mrna1.exon1;Name=FBgn0036489.1;Parent=FBgn0036489.1.mrna1;Target=FBgn0036489.1 1 112 +
Chr1	stalkie_big_nohaplotig	exon	59388247	59388405	100	-	.	ID=FBgn0036489.1.mrna1.exon2;Name=FBgn0036489.1;Parent=FBgn0036489.1.mrna1;Target=FBgn0036489.1 113 271 +
Chr1	stalkie_big_nohaplotig	exon	59387998	59388193	100	-	.	ID=FBgn0036489.1.mrna1.exon3;Name=FBgn0036489.1;Parent=FBgn0036489.1.mrna1;Target=FBgn0036489.1 272 467 +
Chr1	stalkie_big_nohaplotig	exon	59387782	59387941	100	-	.	ID=FBgn0036489.1.mrna1.exon4;Name=FBgn0036489.1;Parent=FBgn0036489.1.mrna1;Target=FBgn0036489.1 468 627 +
Chr1	stalkie_big_nohaplotig	exon	59387539	59387719	100	-	.	ID=FBgn0036489.1.mrna1.exon5;Name=FBgn0036489.1;Parent=FBgn0036489.1.mrna1;Target=FBgn0036489.1 628 808 +
Chr1	stalkie_big_nohaplotig	exon	59385788	59385989	99	-	.	ID=FBgn0036489.1.mrna1.exon6;Name=FBgn0036489.1;Parent=FBgn0036489.1.mrna1;Target=FBgn0036489.1 809 1010 +
Chr1	stalkie_big_nohaplotig	exon	59385604	59385736	100	-	.	ID=FBgn0036489.1.mrna1.exon7;Name=FBgn0036489.1;Parent=FBgn0036489.1.mrna1;Target=FBgn0036489.1 1011 1143 +
Chr1	stalkie_big_nohaplotig	CDS	59388467	59388578	100	-	0	ID=FBgn0036489.1.mrna1.cds1;Name=FBgn0036489.1;Parent=FBgn0036489.1.mrna1;Target=FBgn0036489.1 1 112 +
Chr1	stalkie_big_nohaplotig	CDS	59388247	59388405	100	-	1	ID=FBgn0036489.1.mrna1.cds2;Name=FBgn0036489.1;Parent=FBgn0036489.1.mrna1;Target=FBgn0036489.1 113 271 +
Chr1	stalkie_big_nohaplotig	CDS	59387998	59388193	100	-	1	ID=FBgn0036489.1.mrna1.cds3;Name=FBgn0036489.1;Parent=FBgn0036489.1.mrna1;Target=FBgn0036489.1 272 467 +
Chr1	stalkie_big_nohaplotig	CDS	59387782	59387941	100	-	2	ID=FBgn0036489.1.mrna1.cds4;Name=FBgn0036489.1;Parent=FBgn0036489.1.mrna1;Target=FBgn0036489.1 468 627 +
Chr1	stalkie_big_nohaplotig	CDS	59387539	59387719	100	-	0	ID=FBgn0036489.1.mrna1.cds5;Name=FBgn0036489.1;Parent=FBgn0036489.1.mrna1;Target=FBgn0036489.1 628 808 +
Chr1	stalkie_big_nohaplotig	CDS	59385788	59385989	99	-	1	ID=FBgn0036489.1.mrna1.cds6;Name=FBgn0036489.1;Parent=FBgn0036489.1.mrna1;Target=FBgn0036489.1 809 1010 +
Chr1	stalkie_big_nohaplotig	CDS	59385604	59385736	100	-	2	ID=FBgn0036489.1.mrna1.cds7;Name=FBgn0036489.1;Parent=FBgn0036489.1.mrna1;Target=FBgn0036489.1 1011 1143 +
Chr2	stalkie_big_nohaplotig	mRNA	83989120	83993826	.	+	.	ID=ORF463.mrna1;Name=ORF463;Parent=ORF463.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1772;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	83989120	83989293	100	+	.	ID=ORF463.mrna1.exon1;Name=ORF463;Parent=ORF463.mrna1;Target=ORF463 1 174 +
Chr2	stalkie_big_nohaplotig	exon	83990618	83990908	100	+	.	ID=ORF463.mrna1.exon2;Name=ORF463;Parent=ORF463.mrna1;Target=ORF463 175 465 +
Chr2	stalkie_big_nohaplotig	exon	83990972	83992205	99	+	.	ID=ORF463.mrna1.exon3;Name=ORF463;Parent=ORF463.mrna1;Target=ORF463 466 1699 +
Chr2	stalkie_big_nohaplotig	exon	83993753	83993826	100	+	.	ID=ORF463.mrna1.exon4;Name=ORF463;Parent=ORF463.mrna1;Target=ORF463 1700 1773 +
Chr2	stalkie_big_nohaplotig	CDS	83989120	83989293	100	+	0	ID=ORF463.mrna1.cds1;Name=ORF463;Parent=ORF463.mrna1;Target=ORF463 1 174 +
Chr2	stalkie_big_nohaplotig	CDS	83990618	83990908	100	+	0	ID=ORF463.mrna1.cds2;Name=ORF463;Parent=ORF463.mrna1;Target=ORF463 175 465 +
Chr2	stalkie_big_nohaplotig	CDS	83990972	83992205	99	+	0	ID=ORF463.mrna1.cds3;Name=ORF463;Parent=ORF463.mrna1;Target=ORF463 466 1699 +
Chr2	stalkie_big_nohaplotig	CDS	83993753	83993826	100	+	1	ID=ORF463.mrna1.cds4;Name=ORF463;Parent=ORF463.mrna1;Target=ORF463 1700 1773 +
Chr2	stalkie_big_nohaplotig	mRNA	91047429	91082432	.	+	.	ID=FBgn0038542.1.mrna1;Name=FBgn0038542.1;Parent=FBgn0038542.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1940;mismatches=1;indels=0;unknowns=6
Chr2	stalkie_big_nohaplotig	exon	91047429	91048056	99	+	.	ID=FBgn0038542.1.mrna1.exon1;Name=FBgn0038542.1;Parent=FBgn0038542.1.mrna1;Target=FBgn0038542.1 1 628 +
Chr2	stalkie_big_nohaplotig	exon	91069332	91069434	100	+	.	ID=FBgn0038542.1.mrna1.exon2;Name=FBgn0038542.1;Parent=FBgn0038542.1.mrna1;Target=FBgn0038542.1 629 731 +
Chr2	stalkie_big_nohaplotig	exon	91072524	91072649	100	+	.	ID=FBgn0038542.1.mrna1.exon3;Name=FBgn0038542.1;Parent=FBgn0038542.1.mrna1;Target=FBgn0038542.1 732 857 +
Chr2	stalkie_big_nohaplotig	exon	91074488	91074671	100	+	.	ID=FBgn0038542.1.mrna1.exon4;Name=FBgn0038542.1;Parent=FBgn0038542.1.mrna1;Target=FBgn0038542.1 858 1041 +
Chr2	stalkie_big_nohaplotig	exon	91081527	91082432	100	+	.	ID=FBgn0038542.1.mrna1.exon5;Name=FBgn0038542.1;Parent=FBgn0038542.1.mrna1;Target=FBgn0038542.1 1042 1947 +
Chr2	stalkie_big_nohaplotig	CDS	91047429	91048056	99	+	0	ID=FBgn0038542.1.mrna1.cds1;Name=FBgn0038542.1;Parent=FBgn0038542.1.mrna1;Target=FBgn0038542.1 1 628 +
Chr2	stalkie_big_nohaplotig	CDS	91069332	91069434	100	+	1	ID=FBgn0038542.1.mrna1.cds2;Name=FBgn0038542.1;Parent=FBgn0038542.1.mrna1;Target=FBgn0038542.1 629 731 +
Chr2	stalkie_big_nohaplotig	CDS	91072524	91072649	100	+	2	ID=FBgn0038542.1.mrna1.cds3;Name=FBgn0038542.1;Parent=FBgn0038542.1.mrna1;Target=FBgn0038542.1 732 857 +
Chr2	stalkie_big_nohaplotig	CDS	91074488	91074671	100	+	2	ID=FBgn0038542.1.mrna1.cds4;Name=FBgn0038542.1;Parent=FBgn0038542.1.mrna1;Target=FBgn0038542.1 858 1041 +
Chr2	stalkie_big_nohaplotig	CDS	91081527	91082432	100	+	0	ID=FBgn0038542.1.mrna1.cds5;Name=FBgn0038542.1;Parent=FBgn0038542.1.mrna1;Target=FBgn0038542.1 1042 1947 +
Chr2	stalkie_big_nohaplotig	mRNA	91134346	91146516	.	-	.	ID=FBgn0038541.1.mrna1;Name=FBgn0038541.1;Parent=FBgn0038541.1.path1;Dir=sensecoverage=99.8;identity=99.7;matches=1599;mismatches=4;indels=1;unknowns=19
Chr2	stalkie_big_nohaplotig	exon	91145985	91146516	99	-	.	ID=FBgn0038541.1.mrna1.exon1;Name=FBgn0038541.1;Parent=FBgn0038541.1.mrna1;Target=FBgn0038541.1 4 535 +
Chr2	stalkie_big_nohaplotig	exon	91140086	91140188	100	-	.	ID=FBgn0038541.1.mrna1.exon2;Name=FBgn0038541.1;Parent=FBgn0038541.1.mrna1;Target=FBgn0038541.1 536 638 +
Chr2	stalkie_big_nohaplotig	exon	91139150	91139275	100	-	.	ID=FBgn0038541.1.mrna1.exon3;Name=FBgn0038541.1;Parent=FBgn0038541.1.mrna1;Target=FBgn0038541.1 639 764 +
Chr2	stalkie_big_nohaplotig	exon	91138420	91138597	100	-	.	ID=FBgn0038541.1.mrna1.exon4;Name=FBgn0038541.1;Parent=FBgn0038541.1.mrna1;Target=FBgn0038541.1 765 942 +
Chr2	stalkie_big_nohaplotig	exon	91134346	91135028	99	-	.	ID=FBgn0038541.1.mrna1.exon5;Name=FBgn0038541.1;Parent=FBgn0038541.1.mrna1;Target=FBgn0038541.1 943 1626 +
Chr2	stalkie_big_nohaplotig	CDS	91145985	91146516	99	-	0	ID=FBgn0038541.1.mrna1.cds1;Name=FBgn0038541.1;Parent=FBgn0038541.1.mrna1;Target=FBgn0038541.1 4 535 +
Chr2	stalkie_big_nohaplotig	CDS	91140086	91140188	100	-	1	ID=FBgn0038541.1.mrna1.cds2;Name=FBgn0038541.1;Parent=FBgn0038541.1.mrna1;Target=FBgn0038541.1 536 638 +
Chr2	stalkie_big_nohaplotig	CDS	91139150	91139275	100	-	2	ID=FBgn0038541.1.mrna1.cds3;Name=FBgn0038541.1;Parent=FBgn0038541.1.mrna1;Target=FBgn0038541.1 639 764 +
Chr2	stalkie_big_nohaplotig	CDS	91138420	91138597	100	-	2	ID=FBgn0038541.1.mrna1.cds4;Name=FBgn0038541.1;Parent=FBgn0038541.1.mrna1;Target=FBgn0038541.1 765 942 +
Chr2	stalkie_big_nohaplotig	CDS	91134346	91135028	99	-	0	ID=FBgn0038541.1.mrna1.cds5;Name=FBgn0038541.1;Parent=FBgn0038541.1.mrna1;Target=FBgn0038541.1 943 1626 +
ChrX	stalkie_big_nohaplotig	mRNA	54561328	54564995	.	-	.	ID=FBgn0028519.2.mrna1;Name=FBgn0028519.2;Parent=FBgn0028519.2.path1;Dir=sensecoverage=100.0;identity=99.7;matches=2045;mismatches=7;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	54564291	54564995	99	-	.	ID=FBgn0028519.2.mrna1.exon1;Name=FBgn0028519.2;Parent=FBgn0028519.2.mrna1;Target=FBgn0028519.2 1 705 +
ChrX	stalkie_big_nohaplotig	exon	54563735	54564135	100	-	.	ID=FBgn0028519.2.mrna1.exon2;Name=FBgn0028519.2;Parent=FBgn0028519.2.mrna1;Target=FBgn0028519.2 706 1106 +
ChrX	stalkie_big_nohaplotig	exon	54563381	54563672	98	-	.	ID=FBgn0028519.2.mrna1.exon3;Name=FBgn0028519.2;Parent=FBgn0028519.2.mrna1;Target=FBgn0028519.2 1107 1398 +
ChrX	stalkie_big_nohaplotig	exon	54562934	54563224	100	-	.	ID=FBgn0028519.2.mrna1.exon4;Name=FBgn0028519.2;Parent=FBgn0028519.2.mrna1;Target=FBgn0028519.2 1399 1689 +
ChrX	stalkie_big_nohaplotig	exon	54561472	54561763	99	-	.	ID=FBgn0028519.2.mrna1.exon5;Name=FBgn0028519.2;Parent=FBgn0028519.2.mrna1;Target=FBgn0028519.2 1690 1981 +
ChrX	stalkie_big_nohaplotig	exon	54561328	54561398	100	-	.	ID=FBgn0028519.2.mrna1.exon6;Name=FBgn0028519.2;Parent=FBgn0028519.2.mrna1;Target=FBgn0028519.2 1982 2052 +
ChrX	stalkie_big_nohaplotig	CDS	54564291	54564995	99	-	0	ID=FBgn0028519.2.mrna1.cds1;Name=FBgn0028519.2;Parent=FBgn0028519.2.mrna1;Target=FBgn0028519.2 1 705 +
ChrX	stalkie_big_nohaplotig	CDS	54563735	54564135	100	-	0	ID=FBgn0028519.2.mrna1.cds2;Name=FBgn0028519.2;Parent=FBgn0028519.2.mrna1;Target=FBgn0028519.2 706 1106 +
ChrX	stalkie_big_nohaplotig	CDS	54563381	54563672	98	-	2	ID=FBgn0028519.2.mrna1.cds3;Name=FBgn0028519.2;Parent=FBgn0028519.2.mrna1;Target=FBgn0028519.2 1107 1398 +
ChrX	stalkie_big_nohaplotig	CDS	54562934	54563224	100	-	0	ID=FBgn0028519.2.mrna1.cds4;Name=FBgn0028519.2;Parent=FBgn0028519.2.mrna1;Target=FBgn0028519.2 1399 1689 +
ChrX	stalkie_big_nohaplotig	CDS	54561472	54561763	99	-	0	ID=FBgn0028519.2.mrna1.cds5;Name=FBgn0028519.2;Parent=FBgn0028519.2.mrna1;Target=FBgn0028519.2 1690 1981 +
ChrX	stalkie_big_nohaplotig	CDS	54561328	54561398	100	-	1	ID=FBgn0028519.2.mrna1.cds6;Name=FBgn0028519.2;Parent=FBgn0028519.2.mrna1;Target=FBgn0028519.2 1982 2052 +
Chr1	stalkie_big_nohaplotig	mRNA	165208841	165227093	.	-	.	ID=FBgn0004102.1.mrna1;Name=FBgn0004102.1;Parent=FBgn0004102.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1474;mismatches=2;indels=3;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	165226871	165227093	99	-	.	ID=FBgn0004102.1.mrna1.exon1;Name=FBgn0004102.1;Parent=FBgn0004102.1.mrna1;Target=FBgn0004102.1 1 223 +
Chr1	stalkie_big_nohaplotig	exon	165223527	165223681	100	-	.	ID=FBgn0004102.1.mrna1.exon2;Name=FBgn0004102.1;Parent=FBgn0004102.1.mrna1;Target=FBgn0004102.1 224 378 +
Chr1	stalkie_big_nohaplotig	exon	165208841	165209941	99	-	.	ID=FBgn0004102.1.mrna1.exon3;Name=FBgn0004102.1;Parent=FBgn0004102.1.mrna1;Target=FBgn0004102.1 379 1476 +
Chr1	stalkie_big_nohaplotig	CDS	165226871	165227093	99	-	0	ID=FBgn0004102.1.mrna1.cds1;Name=FBgn0004102.1;Parent=FBgn0004102.1.mrna1;Target=FBgn0004102.1 1 223 +
Chr1	stalkie_big_nohaplotig	CDS	165223527	165223681	100	-	1	ID=FBgn0004102.1.mrna1.cds2;Name=FBgn0004102.1;Parent=FBgn0004102.1.mrna1;Target=FBgn0004102.1 224 378 +
Chr1	stalkie_big_nohaplotig	CDS	165208841	165209941	99	-	0	ID=FBgn0004102.1.mrna1.cds3;Name=FBgn0004102.1;Parent=FBgn0004102.1.mrna1;Target=FBgn0004102.1 379 1476 +
Chr1	stalkie_big_nohaplotig	mRNA	165186941	165190126	.	-	.	ID=FBgn0030054.1.mrna1;Name=FBgn0030054.1;Parent=FBgn0030054.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=3007;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	165189521	165190126	100	-	.	ID=FBgn0030054.1.mrna1.exon1;Name=FBgn0030054.1;Parent=FBgn0030054.1.mrna1;Target=FBgn0030054.1 1 606 +
Chr1	stalkie_big_nohaplotig	exon	165188515	165189454	99	-	.	ID=FBgn0030054.1.mrna1.exon2;Name=FBgn0030054.1;Parent=FBgn0030054.1.mrna1;Target=FBgn0030054.1 607 1546 +
Chr1	stalkie_big_nohaplotig	exon	165188293	165188462	100	-	.	ID=FBgn0030054.1.mrna1.exon3;Name=FBgn0030054.1;Parent=FBgn0030054.1.mrna1;Target=FBgn0030054.1 1547 1716 +
Chr1	stalkie_big_nohaplotig	exon	165186941	165188236	99	-	.	ID=FBgn0030054.1.mrna1.exon4;Name=FBgn0030054.1;Parent=FBgn0030054.1.mrna1;Target=FBgn0030054.1 1717 3012 +
Chr1	stalkie_big_nohaplotig	CDS	165189521	165190126	100	-	0	ID=FBgn0030054.1.mrna1.cds1;Name=FBgn0030054.1;Parent=FBgn0030054.1.mrna1;Target=FBgn0030054.1 1 606 +
Chr1	stalkie_big_nohaplotig	CDS	165188515	165189454	99	-	0	ID=FBgn0030054.1.mrna1.cds2;Name=FBgn0030054.1;Parent=FBgn0030054.1.mrna1;Target=FBgn0030054.1 607 1546 +
Chr1	stalkie_big_nohaplotig	CDS	165188293	165188462	100	-	1	ID=FBgn0030054.1.mrna1.cds3;Name=FBgn0030054.1;Parent=FBgn0030054.1.mrna1;Target=FBgn0030054.1 1547 1716 +
Chr1	stalkie_big_nohaplotig	CDS	165186941	165188236	99	-	0	ID=FBgn0030054.1.mrna1.cds4;Name=FBgn0030054.1;Parent=FBgn0030054.1.mrna1;Target=FBgn0030054.1 1717 3012 +
Chr1	stalkie_big_nohaplotig	mRNA	165274072	165279518	.	+	.	ID=ORF1028.mrna1;Name=ORF1028;Parent=ORF1028.path1;Dir=sensecoverage=100.0;identity=99.0;matches=1259;mismatches=1;indels=12;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	165274072	165274485	100	+	.	ID=ORF1028.mrna1.exon1;Name=ORF1028;Parent=ORF1028.mrna1;Target=ORF1028 1 414 +
Chr1	stalkie_big_nohaplotig	exon	165275406	165276227	98	+	.	ID=ORF1028.mrna1.exon2;Name=ORF1028;Parent=ORF1028.mrna1;Target=ORF1028 415 1248 +
Chr1	stalkie_big_nohaplotig	exon	165279495	165279518	95	+	.	ID=ORF1028.mrna1.exon3;Name=ORF1028;Parent=ORF1028.mrna1;Target=ORF1028 1249 1272 +
Chr1	stalkie_big_nohaplotig	CDS	165274072	165274485	100	+	0	ID=ORF1028.mrna1.cds1;Name=ORF1028;Parent=ORF1028.mrna1;Target=ORF1028 1 414 +
Chr1	stalkie_big_nohaplotig	CDS	165275406	165276227	98	+	0	ID=ORF1028.mrna1.cds2;Name=ORF1028;Parent=ORF1028.mrna1;Target=ORF1028 415 1248 +
Chr1	stalkie_big_nohaplotig	CDS	165279495	165279518	95	+	0	ID=ORF1028.mrna1.cds3;Name=ORF1028;Parent=ORF1028.mrna1;Target=ORF1028 1249 1272 +
Chr2	stalkie_big_nohaplotig	mRNA	78064166	78072054	.	+	.	ID=FBgn0038747.1.mrna1;Name=FBgn0038747.1;Parent=FBgn0038747.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2408;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	78064166	78064245	100	+	.	ID=FBgn0038747.1.mrna1.exon1;Name=FBgn0038747.1;Parent=FBgn0038747.1.mrna1;Target=FBgn0038747.1 1 80 +
Chr2	stalkie_big_nohaplotig	exon	78064363	78064604	100	+	.	ID=FBgn0038747.1.mrna1.exon2;Name=FBgn0038747.1;Parent=FBgn0038747.1.mrna1;Target=FBgn0038747.1 81 322 +
Chr2	stalkie_big_nohaplotig	exon	78065313	78065488	100	+	.	ID=FBgn0038747.1.mrna1.exon3;Name=FBgn0038747.1;Parent=FBgn0038747.1.mrna1;Target=FBgn0038747.1 323 498 +
Chr2	stalkie_big_nohaplotig	exon	78070082	78071042	99	+	.	ID=FBgn0038747.1.mrna1.exon4;Name=FBgn0038747.1;Parent=FBgn0038747.1.mrna1;Target=FBgn0038747.1 499 1459 +
Chr2	stalkie_big_nohaplotig	exon	78071105	78072054	100	+	.	ID=FBgn0038747.1.mrna1.exon5;Name=FBgn0038747.1;Parent=FBgn0038747.1.mrna1;Target=FBgn0038747.1 1460 2409 +
Chr2	stalkie_big_nohaplotig	CDS	78064166	78064245	100	+	0	ID=FBgn0038747.1.mrna1.cds1;Name=FBgn0038747.1;Parent=FBgn0038747.1.mrna1;Target=FBgn0038747.1 1 80 +
Chr2	stalkie_big_nohaplotig	CDS	78064363	78064604	100	+	2	ID=FBgn0038747.1.mrna1.cds2;Name=FBgn0038747.1;Parent=FBgn0038747.1.mrna1;Target=FBgn0038747.1 81 322 +
Chr2	stalkie_big_nohaplotig	CDS	78065313	78065488	100	+	1	ID=FBgn0038747.1.mrna1.cds3;Name=FBgn0038747.1;Parent=FBgn0038747.1.mrna1;Target=FBgn0038747.1 323 498 +
Chr2	stalkie_big_nohaplotig	CDS	78070082	78071042	99	+	0	ID=FBgn0038747.1.mrna1.cds4;Name=FBgn0038747.1;Parent=FBgn0038747.1.mrna1;Target=FBgn0038747.1 499 1459 +
Chr2	stalkie_big_nohaplotig	CDS	78071105	78072054	100	+	1	ID=FBgn0038747.1.mrna1.cds5;Name=FBgn0038747.1;Parent=FBgn0038747.1.mrna1;Target=FBgn0038747.1 1460 2409 +
Chr2	stalkie_big_nohaplotig	mRNA	78122170	78125762	.	-	.	ID=FBgn0038753.1.mrna1;Name=FBgn0038753.1;Parent=FBgn0038753.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2003;mismatches=4;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	78125080	78125762	99	-	.	ID=FBgn0038753.1.mrna1.exon1;Name=FBgn0038753.1;Parent=FBgn0038753.1.mrna1;Target=FBgn0038753.1 1 683 +
Chr2	stalkie_big_nohaplotig	exon	78124805	78124959	100	-	.	ID=FBgn0038753.1.mrna1.exon2;Name=FBgn0038753.1;Parent=FBgn0038753.1.mrna1;Target=FBgn0038753.1 684 838 +
Chr2	stalkie_big_nohaplotig	exon	78123346	78123514	100	-	.	ID=FBgn0038753.1.mrna1.exon3;Name=FBgn0038753.1;Parent=FBgn0038753.1.mrna1;Target=FBgn0038753.1 839 1007 +
Chr2	stalkie_big_nohaplotig	exon	78122970	78123289	100	-	.	ID=FBgn0038753.1.mrna1.exon4;Name=FBgn0038753.1;Parent=FBgn0038753.1.mrna1;Target=FBgn0038753.1 1008 1327 +
Chr2	stalkie_big_nohaplotig	exon	78122774	78122908	100	-	.	ID=FBgn0038753.1.mrna1.exon5;Name=FBgn0038753.1;Parent=FBgn0038753.1.mrna1;Target=FBgn0038753.1 1328 1462 +
Chr2	stalkie_big_nohaplotig	exon	78122170	78122714	100	-	.	ID=FBgn0038753.1.mrna1.exon6;Name=FBgn0038753.1;Parent=FBgn0038753.1.mrna1;Target=FBgn0038753.1 1463 2007 +
Chr2	stalkie_big_nohaplotig	CDS	78125080	78125762	99	-	0	ID=FBgn0038753.1.mrna1.cds1;Name=FBgn0038753.1;Parent=FBgn0038753.1.mrna1;Target=FBgn0038753.1 1 683 +
Chr2	stalkie_big_nohaplotig	CDS	78124805	78124959	100	-	2	ID=FBgn0038753.1.mrna1.cds2;Name=FBgn0038753.1;Parent=FBgn0038753.1.mrna1;Target=FBgn0038753.1 684 838 +
Chr2	stalkie_big_nohaplotig	CDS	78123346	78123514	100	-	1	ID=FBgn0038753.1.mrna1.cds3;Name=FBgn0038753.1;Parent=FBgn0038753.1.mrna1;Target=FBgn0038753.1 839 1007 +
Chr2	stalkie_big_nohaplotig	CDS	78122970	78123289	100	-	2	ID=FBgn0038753.1.mrna1.cds4;Name=FBgn0038753.1;Parent=FBgn0038753.1.mrna1;Target=FBgn0038753.1 1008 1327 +
Chr2	stalkie_big_nohaplotig	CDS	78122774	78122908	100	-	1	ID=FBgn0038753.1.mrna1.cds5;Name=FBgn0038753.1;Parent=FBgn0038753.1.mrna1;Target=FBgn0038753.1 1328 1462 +
Chr2	stalkie_big_nohaplotig	CDS	78122170	78122714	100	-	1	ID=FBgn0038753.1.mrna1.cds6;Name=FBgn0038753.1;Parent=FBgn0038753.1.mrna1;Target=FBgn0038753.1 1463 2007 +
Chr1	stalkie_big_nohaplotig	mRNA	152510295	152511830	.	-	.	ID=ORF2942.mrna1;Name=ORF2942;Parent=ORF2942.path1;Dir=sensecoverage=100.0;identity=99.7;matches=784;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	152511772	152511830	100	-	.	ID=ORF2942.mrna1.exon1;Name=ORF2942;Parent=ORF2942.mrna1;Target=ORF2942 1 59 +
Chr1	stalkie_big_nohaplotig	exon	152510922	152511096	100	-	.	ID=ORF2942.mrna1.exon2;Name=ORF2942;Parent=ORF2942.mrna1;Target=ORF2942 60 234 +
Chr1	stalkie_big_nohaplotig	exon	152510295	152510846	99	-	.	ID=ORF2942.mrna1.exon3;Name=ORF2942;Parent=ORF2942.mrna1;Target=ORF2942 235 786 +
Chr1	stalkie_big_nohaplotig	CDS	152511772	152511830	100	-	0	ID=ORF2942.mrna1.cds1;Name=ORF2942;Parent=ORF2942.mrna1;Target=ORF2942 1 59 +
Chr1	stalkie_big_nohaplotig	CDS	152510922	152511096	100	-	2	ID=ORF2942.mrna1.cds2;Name=ORF2942;Parent=ORF2942.mrna1;Target=ORF2942 60 234 +
Chr1	stalkie_big_nohaplotig	CDS	152510295	152510846	99	-	0	ID=ORF2942.mrna1.cds3;Name=ORF2942;Parent=ORF2942.mrna1;Target=ORF2942 235 786 +
Chr1	stalkie_big_nohaplotig	mRNA	152537199	152539313	.	-	.	ID=FBgn0037621.2.mrna1;Name=FBgn0037621.2;Parent=FBgn0037621.2.path1;Dir=sensecoverage=100.0;identity=99.5;matches=1057;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	152539185	152539313	99	-	.	ID=FBgn0037621.2.mrna1.exon1;Name=FBgn0037621.2;Parent=FBgn0037621.2.mrna1;Target=FBgn0037621.2 1 129 +
Chr1	stalkie_big_nohaplotig	exon	152538524	152539119	99	-	.	ID=FBgn0037621.2.mrna1.exon2;Name=FBgn0037621.2;Parent=FBgn0037621.2.mrna1;Target=FBgn0037621.2 130 725 +
Chr1	stalkie_big_nohaplotig	exon	152538409	152538470	100	-	.	ID=FBgn0037621.2.mrna1.exon3;Name=FBgn0037621.2;Parent=FBgn0037621.2.mrna1;Target=FBgn0037621.2 726 787 +
Chr1	stalkie_big_nohaplotig	exon	152538131	152538203	100	-	.	ID=FBgn0037621.2.mrna1.exon4;Name=FBgn0037621.2;Parent=FBgn0037621.2.mrna1;Target=FBgn0037621.2 788 860 +
Chr1	stalkie_big_nohaplotig	exon	152537354	152537464	100	-	.	ID=FBgn0037621.2.mrna1.exon5;Name=FBgn0037621.2;Parent=FBgn0037621.2.mrna1;Target=FBgn0037621.2 861 971 +
Chr1	stalkie_big_nohaplotig	exon	152537199	152537289	100	-	.	ID=FBgn0037621.2.mrna1.exon6;Name=FBgn0037621.2;Parent=FBgn0037621.2.mrna1;Target=FBgn0037621.2 972 1062 +
Chr1	stalkie_big_nohaplotig	CDS	152539185	152539313	99	-	0	ID=FBgn0037621.2.mrna1.cds1;Name=FBgn0037621.2;Parent=FBgn0037621.2.mrna1;Target=FBgn0037621.2 1 129 +
Chr1	stalkie_big_nohaplotig	CDS	152538524	152539119	99	-	0	ID=FBgn0037621.2.mrna1.cds2;Name=FBgn0037621.2;Parent=FBgn0037621.2.mrna1;Target=FBgn0037621.2 130 725 +
Chr1	stalkie_big_nohaplotig	CDS	152538409	152538470	100	-	2	ID=FBgn0037621.2.mrna1.cds3;Name=FBgn0037621.2;Parent=FBgn0037621.2.mrna1;Target=FBgn0037621.2 726 787 +
Chr1	stalkie_big_nohaplotig	CDS	152538131	152538203	100	-	1	ID=FBgn0037621.2.mrna1.cds4;Name=FBgn0037621.2;Parent=FBgn0037621.2.mrna1;Target=FBgn0037621.2 788 860 +
Chr1	stalkie_big_nohaplotig	CDS	152537354	152537464	100	-	2	ID=FBgn0037621.2.mrna1.cds5;Name=FBgn0037621.2;Parent=FBgn0037621.2.mrna1;Target=FBgn0037621.2 861 971 +
Chr1	stalkie_big_nohaplotig	CDS	152537199	152537289	100	-	2	ID=FBgn0037621.2.mrna1.cds6;Name=FBgn0037621.2;Parent=FBgn0037621.2.mrna1;Target=FBgn0037621.2 972 1062 +
Chr2	stalkie_big_nohaplotig	mRNA	24427744	24433021	.	-	.	ID=FBgn0033051.1.mrna1;Name=FBgn0033051.1;Parent=FBgn0033051.1.path1;Dir=sensecoverage=100.0;identity=99.4;matches=1870;mismatches=11;indels=0;unknowns=3
Chr2	stalkie_big_nohaplotig	exon	24431614	24433021	99	-	.	ID=FBgn0033051.1.mrna1.exon1;Name=FBgn0033051.1;Parent=FBgn0033051.1.mrna1;Target=FBgn0033051.1 1 1408 +
Chr2	stalkie_big_nohaplotig	exon	24429280	24429555	99	-	.	ID=FBgn0033051.1.mrna1.exon2;Name=FBgn0033051.1;Parent=FBgn0033051.1.mrna1;Target=FBgn0033051.1 1409 1684 +
Chr2	stalkie_big_nohaplotig	exon	24429084	24429219	100	-	.	ID=FBgn0033051.1.mrna1.exon3;Name=FBgn0033051.1;Parent=FBgn0033051.1.mrna1;Target=FBgn0033051.1 1685 1820 +
Chr2	stalkie_big_nohaplotig	exon	24427744	24427807	100	-	.	ID=FBgn0033051.1.mrna1.exon4;Name=FBgn0033051.1;Parent=FBgn0033051.1.mrna1;Target=FBgn0033051.1 1821 1884 +
Chr2	stalkie_big_nohaplotig	CDS	24431614	24433021	99	-	0	ID=FBgn0033051.1.mrna1.cds1;Name=FBgn0033051.1;Parent=FBgn0033051.1.mrna1;Target=FBgn0033051.1 1 1408 +
Chr2	stalkie_big_nohaplotig	CDS	24429280	24429555	99	-	1	ID=FBgn0033051.1.mrna1.cds2;Name=FBgn0033051.1;Parent=FBgn0033051.1.mrna1;Target=FBgn0033051.1 1409 1684 +
Chr2	stalkie_big_nohaplotig	CDS	24429084	24429219	100	-	1	ID=FBgn0033051.1.mrna1.cds3;Name=FBgn0033051.1;Parent=FBgn0033051.1.mrna1;Target=FBgn0033051.1 1685 1820 +
Chr2	stalkie_big_nohaplotig	CDS	24427744	24427807	100	-	2	ID=FBgn0033051.1.mrna1.cds4;Name=FBgn0033051.1;Parent=FBgn0033051.1.mrna1;Target=FBgn0033051.1 1821 1884 +
Chr2	stalkie_big_nohaplotig	mRNA	24325467	24330007	.	-	.	ID=FBgn0034083.1.mrna1;Name=FBgn0034083.1;Parent=FBgn0034083.1.path1;Dir=sensecoverage=99.9;identity=99.6;matches=3076;mismatches=12;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	24329945	24330007	98	-	.	ID=FBgn0034083.1.mrna1.exon1;Name=FBgn0034083.1;Parent=FBgn0034083.1.mrna1;Target=FBgn0034083.1 3 65 +
Chr2	stalkie_big_nohaplotig	exon	24329741	24329884	99	-	.	ID=FBgn0034083.1.mrna1.exon2;Name=FBgn0034083.1;Parent=FBgn0034083.1.mrna1;Target=FBgn0034083.1 66 209 +
Chr2	stalkie_big_nohaplotig	exon	24328848	24329680	99	-	.	ID=FBgn0034083.1.mrna1.exon3;Name=FBgn0034083.1;Parent=FBgn0034083.1.mrna1;Target=FBgn0034083.1 210 1042 +
Chr2	stalkie_big_nohaplotig	exon	24328324	24328698	100	-	.	ID=FBgn0034083.1.mrna1.exon4;Name=FBgn0034083.1;Parent=FBgn0034083.1.mrna1;Target=FBgn0034083.1 1043 1417 +
Chr2	stalkie_big_nohaplotig	exon	24327983	24328264	99	-	.	ID=FBgn0034083.1.mrna1.exon5;Name=FBgn0034083.1;Parent=FBgn0034083.1.mrna1;Target=FBgn0034083.1 1418 1699 +
Chr2	stalkie_big_nohaplotig	exon	24325467	24326857	99	-	.	ID=FBgn0034083.1.mrna1.exon6;Name=FBgn0034083.1;Parent=FBgn0034083.1.mrna1;Target=FBgn0034083.1 1700 3090 +
Chr2	stalkie_big_nohaplotig	CDS	24329945	24330006	98	-	0	ID=FBgn0034083.1.mrna1.cds1;Name=FBgn0034083.1;Parent=FBgn0034083.1.mrna1;Target=FBgn0034083.1 4 65 +
Chr2	stalkie_big_nohaplotig	CDS	24329741	24329884	99	-	2	ID=FBgn0034083.1.mrna1.cds2;Name=FBgn0034083.1;Parent=FBgn0034083.1.mrna1;Target=FBgn0034083.1 66 209 +
Chr2	stalkie_big_nohaplotig	CDS	24328848	24329680	99	-	2	ID=FBgn0034083.1.mrna1.cds3;Name=FBgn0034083.1;Parent=FBgn0034083.1.mrna1;Target=FBgn0034083.1 210 1042 +
Chr2	stalkie_big_nohaplotig	CDS	24328324	24328698	100	-	1	ID=FBgn0034083.1.mrna1.cds4;Name=FBgn0034083.1;Parent=FBgn0034083.1.mrna1;Target=FBgn0034083.1 1043 1417 +
Chr2	stalkie_big_nohaplotig	CDS	24327983	24328264	99	-	1	ID=FBgn0034083.1.mrna1.cds5;Name=FBgn0034083.1;Parent=FBgn0034083.1.mrna1;Target=FBgn0034083.1 1418 1699 +
Chr2	stalkie_big_nohaplotig	CDS	24325467	24326857	99	-	1	ID=FBgn0034083.1.mrna1.cds6;Name=FBgn0034083.1;Parent=FBgn0034083.1.mrna1;Target=FBgn0034083.1 1700 3090 +
Chr2	stalkie_big_nohaplotig	mRNA	64474511	64483129	.	+	.	ID=FBgn0034897.1.mrna1;Name=FBgn0034897.1;Parent=FBgn0034897.1.path1;Dir=sensecoverage=98.8;identity=100.0;matches=1434;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	64474511	64474675	100	+	.	ID=FBgn0034897.1.mrna1.exon1;Name=FBgn0034897.1;Parent=FBgn0034897.1.mrna1;Target=FBgn0034897.1 19 183 +
Chr2	stalkie_big_nohaplotig	exon	64480969	64481151	100	+	.	ID=FBgn0034897.1.mrna1.exon2;Name=FBgn0034897.1;Parent=FBgn0034897.1.mrna1;Target=FBgn0034897.1 184 366 +
Chr2	stalkie_big_nohaplotig	exon	64481212	64481918	100	+	.	ID=FBgn0034897.1.mrna1.exon3;Name=FBgn0034897.1;Parent=FBgn0034897.1.mrna1;Target=FBgn0034897.1 367 1073 +
Chr2	stalkie_big_nohaplotig	exon	64481975	64482158	100	+	.	ID=FBgn0034897.1.mrna1.exon4;Name=FBgn0034897.1;Parent=FBgn0034897.1.mrna1;Target=FBgn0034897.1 1074 1257 +
Chr2	stalkie_big_nohaplotig	exon	64482788	64482898	100	+	.	ID=FBgn0034897.1.mrna1.exon5;Name=FBgn0034897.1;Parent=FBgn0034897.1.mrna1;Target=FBgn0034897.1 1258 1368 +
Chr2	stalkie_big_nohaplotig	exon	64483046	64483129	100	+	.	ID=FBgn0034897.1.mrna1.exon6;Name=FBgn0034897.1;Parent=FBgn0034897.1.mrna1;Target=FBgn0034897.1 1369 1452 +
Chr2	stalkie_big_nohaplotig	CDS	64474511	64474675	100	+	0	ID=FBgn0034897.1.mrna1.cds1;Name=FBgn0034897.1;Parent=FBgn0034897.1.mrna1;Target=FBgn0034897.1 19 183 +
Chr2	stalkie_big_nohaplotig	CDS	64480969	64481151	100	+	0	ID=FBgn0034897.1.mrna1.cds2;Name=FBgn0034897.1;Parent=FBgn0034897.1.mrna1;Target=FBgn0034897.1 184 366 +
Chr2	stalkie_big_nohaplotig	CDS	64481212	64481918	100	+	0	ID=FBgn0034897.1.mrna1.cds3;Name=FBgn0034897.1;Parent=FBgn0034897.1.mrna1;Target=FBgn0034897.1 367 1073 +
Chr2	stalkie_big_nohaplotig	CDS	64481975	64482158	100	+	2	ID=FBgn0034897.1.mrna1.cds4;Name=FBgn0034897.1;Parent=FBgn0034897.1.mrna1;Target=FBgn0034897.1 1074 1257 +
Chr2	stalkie_big_nohaplotig	CDS	64482788	64482898	100	+	0	ID=FBgn0034897.1.mrna1.cds5;Name=FBgn0034897.1;Parent=FBgn0034897.1.mrna1;Target=FBgn0034897.1 1258 1368 +
Chr2	stalkie_big_nohaplotig	CDS	64483046	64483129	100	+	0	ID=FBgn0034897.1.mrna1.cds6;Name=FBgn0034897.1;Parent=FBgn0034897.1.mrna1;Target=FBgn0034897.1 1369 1452 +
ChrX	stalkie_big_nohaplotig	mRNA	40279550	40281484	.	-	.	ID=ORF380.mrna1;Name=ORF380;Parent=ORF380.path1;Dir=indeterminatecoverage=100.0;identity=97.7;matches=1891;mismatches=44;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	40279550	40281484	97	-	.	ID=ORF380.mrna1.exon1;Name=ORF380;Parent=ORF380.mrna1;Target=ORF380 1935 1 .
ChrX	stalkie_big_nohaplotig	CDS	40279550	40281484	97	-	0	ID=ORF380.mrna1.cds1;Name=ORF380;Parent=ORF380.mrna1;Target=ORF380 1935 1 .
ChrX	stalkie_big_nohaplotig	mRNA	40294969	40305818	.	+	.	ID=FBgn0010100.1.mrna1;Name=FBgn0010100.1;Parent=FBgn0010100.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=2401;mismatches=8;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	40294969	40295049	100	+	.	ID=FBgn0010100.1.mrna1.exon1;Name=FBgn0010100.1;Parent=FBgn0010100.1.mrna1;Target=FBgn0010100.1 1 81 +
ChrX	stalkie_big_nohaplotig	exon	40303221	40303952	99	+	.	ID=FBgn0010100.1.mrna1.exon2;Name=FBgn0010100.1;Parent=FBgn0010100.1.mrna1;Target=FBgn0010100.1 82 813 +
ChrX	stalkie_big_nohaplotig	exon	40304020	40304747	99	+	.	ID=FBgn0010100.1.mrna1.exon3;Name=FBgn0010100.1;Parent=FBgn0010100.1.mrna1;Target=FBgn0010100.1 814 1541 +
ChrX	stalkie_big_nohaplotig	exon	40304815	40304986	100	+	.	ID=FBgn0010100.1.mrna1.exon4;Name=FBgn0010100.1;Parent=FBgn0010100.1.mrna1;Target=FBgn0010100.1 1542 1713 +
ChrX	stalkie_big_nohaplotig	exon	40305047	40305550	99	+	.	ID=FBgn0010100.1.mrna1.exon5;Name=FBgn0010100.1;Parent=FBgn0010100.1.mrna1;Target=FBgn0010100.1 1714 2217 +
ChrX	stalkie_big_nohaplotig	exon	40305627	40305818	98	+	.	ID=FBgn0010100.1.mrna1.exon6;Name=FBgn0010100.1;Parent=FBgn0010100.1.mrna1;Target=FBgn0010100.1 2218 2409 +
ChrX	stalkie_big_nohaplotig	CDS	40294969	40295049	100	+	0	ID=FBgn0010100.1.mrna1.cds1;Name=FBgn0010100.1;Parent=FBgn0010100.1.mrna1;Target=FBgn0010100.1 1 81 +
ChrX	stalkie_big_nohaplotig	CDS	40303221	40303952	99	+	0	ID=FBgn0010100.1.mrna1.cds2;Name=FBgn0010100.1;Parent=FBgn0010100.1.mrna1;Target=FBgn0010100.1 82 813 +
ChrX	stalkie_big_nohaplotig	CDS	40304020	40304747	99	+	0	ID=FBgn0010100.1.mrna1.cds3;Name=FBgn0010100.1;Parent=FBgn0010100.1.mrna1;Target=FBgn0010100.1 814 1541 +
ChrX	stalkie_big_nohaplotig	CDS	40304815	40304986	100	+	2	ID=FBgn0010100.1.mrna1.cds4;Name=FBgn0010100.1;Parent=FBgn0010100.1.mrna1;Target=FBgn0010100.1 1542 1713 +
ChrX	stalkie_big_nohaplotig	CDS	40305047	40305550	99	+	0	ID=FBgn0010100.1.mrna1.cds5;Name=FBgn0010100.1;Parent=FBgn0010100.1.mrna1;Target=FBgn0010100.1 1714 2217 +
ChrX	stalkie_big_nohaplotig	CDS	40305627	40305818	98	+	0	ID=FBgn0010100.1.mrna1.cds6;Name=FBgn0010100.1;Parent=FBgn0010100.1.mrna1;Target=FBgn0010100.1 2218 2409 +
ChrX	stalkie_big_nohaplotig	mRNA	20693357	20702357	.	-	.	ID=FBgn0032363.1.mrna1;Name=FBgn0032363.1;Parent=FBgn0032363.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=5773;mismatches=17;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	20702267	20702357	100	-	.	ID=FBgn0032363.1.mrna1.exon1;Name=FBgn0032363.1;Parent=FBgn0032363.1.mrna1;Target=FBgn0032363.1 1 91 +
ChrX	stalkie_big_nohaplotig	exon	20698104	20702195	99	-	.	ID=FBgn0032363.1.mrna1.exon2;Name=FBgn0032363.1;Parent=FBgn0032363.1.mrna1;Target=FBgn0032363.1 92 4183 +
ChrX	stalkie_big_nohaplotig	exon	20697445	20698038	100	-	.	ID=FBgn0032363.1.mrna1.exon3;Name=FBgn0032363.1;Parent=FBgn0032363.1.mrna1;Target=FBgn0032363.1 4184 4777 +
ChrX	stalkie_big_nohaplotig	exon	20697146	20697365	100	-	.	ID=FBgn0032363.1.mrna1.exon4;Name=FBgn0032363.1;Parent=FBgn0032363.1.mrna1;Target=FBgn0032363.1 4778 4997 +
ChrX	stalkie_big_nohaplotig	exon	20696850	20697088	100	-	.	ID=FBgn0032363.1.mrna1.exon5;Name=FBgn0032363.1;Parent=FBgn0032363.1.mrna1;Target=FBgn0032363.1 4998 5236 +
ChrX	stalkie_big_nohaplotig	exon	20693816	20694045	99	-	.	ID=FBgn0032363.1.mrna1.exon6;Name=FBgn0032363.1;Parent=FBgn0032363.1.mrna1;Target=FBgn0032363.1 5237 5466 +
ChrX	stalkie_big_nohaplotig	exon	20693534	20693750	98	-	.	ID=FBgn0032363.1.mrna1.exon7;Name=FBgn0032363.1;Parent=FBgn0032363.1.mrna1;Target=FBgn0032363.1 5467 5683 +
ChrX	stalkie_big_nohaplotig	exon	20693357	20693463	100	-	.	ID=FBgn0032363.1.mrna1.exon8;Name=FBgn0032363.1;Parent=FBgn0032363.1.mrna1;Target=FBgn0032363.1 5684 5790 +
ChrX	stalkie_big_nohaplotig	CDS	20702267	20702357	100	-	0	ID=FBgn0032363.1.mrna1.cds1;Name=FBgn0032363.1;Parent=FBgn0032363.1.mrna1;Target=FBgn0032363.1 1 91 +
ChrX	stalkie_big_nohaplotig	CDS	20698104	20702195	99	-	1	ID=FBgn0032363.1.mrna1.cds2;Name=FBgn0032363.1;Parent=FBgn0032363.1.mrna1;Target=FBgn0032363.1 92 4183 +
ChrX	stalkie_big_nohaplotig	CDS	20697445	20698038	100	-	1	ID=FBgn0032363.1.mrna1.cds3;Name=FBgn0032363.1;Parent=FBgn0032363.1.mrna1;Target=FBgn0032363.1 4184 4777 +
ChrX	stalkie_big_nohaplotig	CDS	20697146	20697365	100	-	1	ID=FBgn0032363.1.mrna1.cds4;Name=FBgn0032363.1;Parent=FBgn0032363.1.mrna1;Target=FBgn0032363.1 4778 4997 +
ChrX	stalkie_big_nohaplotig	CDS	20696850	20697088	100	-	2	ID=FBgn0032363.1.mrna1.cds5;Name=FBgn0032363.1;Parent=FBgn0032363.1.mrna1;Target=FBgn0032363.1 4998 5236 +
ChrX	stalkie_big_nohaplotig	CDS	20693816	20694045	99	-	1	ID=FBgn0032363.1.mrna1.cds6;Name=FBgn0032363.1;Parent=FBgn0032363.1.mrna1;Target=FBgn0032363.1 5237 5466 +
ChrX	stalkie_big_nohaplotig	CDS	20693534	20693750	98	-	0	ID=FBgn0032363.1.mrna1.cds7;Name=FBgn0032363.1;Parent=FBgn0032363.1.mrna1;Target=FBgn0032363.1 5467 5683 +
ChrX	stalkie_big_nohaplotig	CDS	20693357	20693463	100	-	1	ID=FBgn0032363.1.mrna1.cds8;Name=FBgn0032363.1;Parent=FBgn0032363.1.mrna1;Target=FBgn0032363.1 5684 5790 +
Chr2	stalkie_big_nohaplotig	mRNA	145211976	145213568	.	-	.	ID=ORF627.mrna1;Name=ORF627;Parent=ORF627.path1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=1582;mismatches=11;indels=3;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	145211976	145213568	99	-	.	ID=ORF627.mrna1.exon1;Name=ORF627;Parent=ORF627.mrna1;Target=ORF627 1596 1 .
Chr2	stalkie_big_nohaplotig	CDS	145211976	145213568	99	-	0	ID=ORF627.mrna1.cds1;Name=ORF627;Parent=ORF627.mrna1;Target=ORF627 1596 1 .
Chr2	stalkie_big_nohaplotig	mRNA	118462890	118468702	.	+	.	ID=FBgn0037757.1.mrna1;Name=FBgn0037757.1;Parent=FBgn0037757.1.path1;Dir=sensecoverage=99.8;identity=100.0;matches=2324;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	118462890	118463020	100	+	.	ID=FBgn0037757.1.mrna1.exon1;Name=FBgn0037757.1;Parent=FBgn0037757.1.mrna1;Target=FBgn0037757.1 1 131 +
Chr2	stalkie_big_nohaplotig	exon	118463218	118463355	100	+	.	ID=FBgn0037757.1.mrna1.exon2;Name=FBgn0037757.1;Parent=FBgn0037757.1.mrna1;Target=FBgn0037757.1 132 269 +
Chr2	stalkie_big_nohaplotig	exon	118463418	118463551	100	+	.	ID=FBgn0037757.1.mrna1.exon3;Name=FBgn0037757.1;Parent=FBgn0037757.1.mrna1;Target=FBgn0037757.1 270 403 +
Chr2	stalkie_big_nohaplotig	exon	118463617	118463732	100	+	.	ID=FBgn0037757.1.mrna1.exon4;Name=FBgn0037757.1;Parent=FBgn0037757.1.mrna1;Target=FBgn0037757.1 404 519 +
Chr2	stalkie_big_nohaplotig	exon	118463801	118464086	100	+	.	ID=FBgn0037757.1.mrna1.exon5;Name=FBgn0037757.1;Parent=FBgn0037757.1.mrna1;Target=FBgn0037757.1 520 805 +
Chr2	stalkie_big_nohaplotig	exon	118464143	118464280	100	+	.	ID=FBgn0037757.1.mrna1.exon6;Name=FBgn0037757.1;Parent=FBgn0037757.1.mrna1;Target=FBgn0037757.1 806 943 +
Chr2	stalkie_big_nohaplotig	exon	118465199	118465821	100	+	.	ID=FBgn0037757.1.mrna1.exon7;Name=FBgn0037757.1;Parent=FBgn0037757.1.mrna1;Target=FBgn0037757.1 944 1566 +
Chr2	stalkie_big_nohaplotig	exon	118465888	118466209	100	+	.	ID=FBgn0037757.1.mrna1.exon8;Name=FBgn0037757.1;Parent=FBgn0037757.1.mrna1;Target=FBgn0037757.1 1567 1888 +
Chr2	stalkie_big_nohaplotig	exon	118468267	118468702	100	+	.	ID=FBgn0037757.1.mrna1.exon9;Name=FBgn0037757.1;Parent=FBgn0037757.1.mrna1;Target=FBgn0037757.1 1889 2324 +
Chr2	stalkie_big_nohaplotig	CDS	118462890	118463020	100	+	0	ID=FBgn0037757.1.mrna1.cds1;Name=FBgn0037757.1;Parent=FBgn0037757.1.mrna1;Target=FBgn0037757.1 1 131 +
Chr2	stalkie_big_nohaplotig	CDS	118463218	118463355	100	+	2	ID=FBgn0037757.1.mrna1.cds2;Name=FBgn0037757.1;Parent=FBgn0037757.1.mrna1;Target=FBgn0037757.1 132 269 +
Chr2	stalkie_big_nohaplotig	CDS	118463418	118463551	100	+	2	ID=FBgn0037757.1.mrna1.cds3;Name=FBgn0037757.1;Parent=FBgn0037757.1.mrna1;Target=FBgn0037757.1 270 403 +
Chr2	stalkie_big_nohaplotig	CDS	118463617	118463732	100	+	1	ID=FBgn0037757.1.mrna1.cds4;Name=FBgn0037757.1;Parent=FBgn0037757.1.mrna1;Target=FBgn0037757.1 404 519 +
Chr2	stalkie_big_nohaplotig	CDS	118463801	118464086	100	+	0	ID=FBgn0037757.1.mrna1.cds5;Name=FBgn0037757.1;Parent=FBgn0037757.1.mrna1;Target=FBgn0037757.1 520 805 +
Chr2	stalkie_big_nohaplotig	CDS	118464143	118464280	100	+	1	ID=FBgn0037757.1.mrna1.cds6;Name=FBgn0037757.1;Parent=FBgn0037757.1.mrna1;Target=FBgn0037757.1 806 943 +
Chr2	stalkie_big_nohaplotig	CDS	118465199	118465821	100	+	1	ID=FBgn0037757.1.mrna1.cds7;Name=FBgn0037757.1;Parent=FBgn0037757.1.mrna1;Target=FBgn0037757.1 944 1566 +
Chr2	stalkie_big_nohaplotig	CDS	118465888	118466209	100	+	0	ID=FBgn0037757.1.mrna1.cds8;Name=FBgn0037757.1;Parent=FBgn0037757.1.mrna1;Target=FBgn0037757.1 1567 1888 +
Chr2	stalkie_big_nohaplotig	CDS	118468267	118468700	100	+	1	ID=FBgn0037757.1.mrna1.cds9;Name=FBgn0037757.1;Parent=FBgn0037757.1.mrna1;Target=FBgn0037757.1 1889 2322 +
Chr2	stalkie_big_nohaplotig	mRNA	42627245	42631298	.	-	.	ID=FBgn0033187.1.mrna1;Name=FBgn0033187.1;Parent=FBgn0033187.1.path1;Dir=sensecoverage=100.0;identity=99.2;matches=2810;mismatches=22;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	42631120	42631298	100	-	.	ID=FBgn0033187.1.mrna1.exon1;Name=FBgn0033187.1;Parent=FBgn0033187.1.mrna1;Target=FBgn0033187.1 1 179 +
Chr2	stalkie_big_nohaplotig	exon	42630687	42631065	99	-	.	ID=FBgn0033187.1.mrna1.exon2;Name=FBgn0033187.1;Parent=FBgn0033187.1.mrna1;Target=FBgn0033187.1 180 558 +
Chr2	stalkie_big_nohaplotig	exon	42630445	42630624	100	-	.	ID=FBgn0033187.1.mrna1.exon3;Name=FBgn0033187.1;Parent=FBgn0033187.1.mrna1;Target=FBgn0033187.1 559 738 +
Chr2	stalkie_big_nohaplotig	exon	42630145	42630281	99	-	.	ID=FBgn0033187.1.mrna1.exon4;Name=FBgn0033187.1;Parent=FBgn0033187.1.mrna1;Target=FBgn0033187.1 739 875 +
Chr2	stalkie_big_nohaplotig	exon	42629886	42630088	99	-	.	ID=FBgn0033187.1.mrna1.exon5;Name=FBgn0033187.1;Parent=FBgn0033187.1.mrna1;Target=FBgn0033187.1 876 1078 +
Chr2	stalkie_big_nohaplotig	exon	42629616	42629824	97	-	.	ID=FBgn0033187.1.mrna1.exon6;Name=FBgn0033187.1;Parent=FBgn0033187.1.mrna1;Target=FBgn0033187.1 1079 1287 +
Chr2	stalkie_big_nohaplotig	exon	42628921	42629554	99	-	.	ID=FBgn0033187.1.mrna1.exon7;Name=FBgn0033187.1;Parent=FBgn0033187.1.mrna1;Target=FBgn0033187.1 1288 1921 +
Chr2	stalkie_big_nohaplotig	exon	42628718	42628856	99	-	.	ID=FBgn0033187.1.mrna1.exon8;Name=FBgn0033187.1;Parent=FBgn0033187.1.mrna1;Target=FBgn0033187.1 1922 2060 +
Chr2	stalkie_big_nohaplotig	exon	42628305	42628647	98	-	.	ID=FBgn0033187.1.mrna1.exon9;Name=FBgn0033187.1;Parent=FBgn0033187.1.mrna1;Target=FBgn0033187.1 2061 2403 +
Chr2	stalkie_big_nohaplotig	exon	42627245	42627673	99	-	.	ID=FBgn0033187.1.mrna1.exon10;Name=FBgn0033187.1;Parent=FBgn0033187.1.mrna1;Target=FBgn0033187.1 2404 2832 +
Chr2	stalkie_big_nohaplotig	CDS	42631120	42631298	100	-	0	ID=FBgn0033187.1.mrna1.cds1;Name=FBgn0033187.1;Parent=FBgn0033187.1.mrna1;Target=FBgn0033187.1 1 179 +
Chr2	stalkie_big_nohaplotig	CDS	42630687	42631065	99	-	2	ID=FBgn0033187.1.mrna1.cds2;Name=FBgn0033187.1;Parent=FBgn0033187.1.mrna1;Target=FBgn0033187.1 180 558 +
Chr2	stalkie_big_nohaplotig	CDS	42630445	42630624	100	-	0	ID=FBgn0033187.1.mrna1.cds3;Name=FBgn0033187.1;Parent=FBgn0033187.1.mrna1;Target=FBgn0033187.1 559 738 +
Chr2	stalkie_big_nohaplotig	CDS	42630145	42630281	99	-	0	ID=FBgn0033187.1.mrna1.cds4;Name=FBgn0033187.1;Parent=FBgn0033187.1.mrna1;Target=FBgn0033187.1 739 875 +
Chr2	stalkie_big_nohaplotig	CDS	42629886	42630088	99	-	2	ID=FBgn0033187.1.mrna1.cds5;Name=FBgn0033187.1;Parent=FBgn0033187.1.mrna1;Target=FBgn0033187.1 876 1078 +
Chr2	stalkie_big_nohaplotig	CDS	42629616	42629824	97	-	1	ID=FBgn0033187.1.mrna1.cds6;Name=FBgn0033187.1;Parent=FBgn0033187.1.mrna1;Target=FBgn0033187.1 1079 1287 +
Chr2	stalkie_big_nohaplotig	CDS	42628921	42629554	99	-	0	ID=FBgn0033187.1.mrna1.cds7;Name=FBgn0033187.1;Parent=FBgn0033187.1.mrna1;Target=FBgn0033187.1 1288 1921 +
Chr2	stalkie_big_nohaplotig	CDS	42628718	42628856	99	-	1	ID=FBgn0033187.1.mrna1.cds8;Name=FBgn0033187.1;Parent=FBgn0033187.1.mrna1;Target=FBgn0033187.1 1922 2060 +
Chr2	stalkie_big_nohaplotig	CDS	42628305	42628647	98	-	2	ID=FBgn0033187.1.mrna1.cds9;Name=FBgn0033187.1;Parent=FBgn0033187.1.mrna1;Target=FBgn0033187.1 2061 2403 +
Chr2	stalkie_big_nohaplotig	CDS	42627245	42627673	99	-	0	ID=FBgn0033187.1.mrna1.cds10;Name=FBgn0033187.1;Parent=FBgn0033187.1.mrna1;Target=FBgn0033187.1 2404 2832 +
Chr2	stalkie_big_nohaplotig	mRNA	42615369	42617772	.	+	.	ID=FBgn0033188.1.mrna1;Name=FBgn0033188.1;Parent=FBgn0033188.1.path1;Dir=sensecoverage=98.6;identity=99.8;matches=1229;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	42615369	42616184	99	+	.	ID=FBgn0033188.1.mrna1.exon1;Name=FBgn0033188.1;Parent=FBgn0033188.1.mrna1;Target=FBgn0033188.1 18 833 +
Chr2	stalkie_big_nohaplotig	exon	42616251	42616398	100	+	.	ID=FBgn0033188.1.mrna1.exon2;Name=FBgn0033188.1;Parent=FBgn0033188.1.mrna1;Target=FBgn0033188.1 834 981 +
Chr2	stalkie_big_nohaplotig	exon	42617429	42617581	100	+	.	ID=FBgn0033188.1.mrna1.exon3;Name=FBgn0033188.1;Parent=FBgn0033188.1.mrna1;Target=FBgn0033188.1 982 1134 +
Chr2	stalkie_big_nohaplotig	exon	42617659	42617772	99	+	.	ID=FBgn0033188.1.mrna1.exon4;Name=FBgn0033188.1;Parent=FBgn0033188.1.mrna1;Target=FBgn0033188.1 1135 1248 +
Chr2	stalkie_big_nohaplotig	CDS	42615370	42616184	99	+	0	ID=FBgn0033188.1.mrna1.cds1;Name=FBgn0033188.1;Parent=FBgn0033188.1.mrna1;Target=FBgn0033188.1 19 833 +
Chr2	stalkie_big_nohaplotig	CDS	42616251	42616398	100	+	2	ID=FBgn0033188.1.mrna1.cds2;Name=FBgn0033188.1;Parent=FBgn0033188.1.mrna1;Target=FBgn0033188.1 834 981 +
Chr2	stalkie_big_nohaplotig	CDS	42617429	42617581	100	+	0	ID=FBgn0033188.1.mrna1.cds3;Name=FBgn0033188.1;Parent=FBgn0033188.1.mrna1;Target=FBgn0033188.1 982 1134 +
Chr2	stalkie_big_nohaplotig	CDS	42617659	42617772	99	+	0	ID=FBgn0033188.1.mrna1.cds4;Name=FBgn0033188.1;Parent=FBgn0033188.1.mrna1;Target=FBgn0033188.1 1135 1248 +
Chr2	stalkie_big_nohaplotig	mRNA	42668294	42672452	.	+	.	ID=FBgn0259745.1.mrna1;Name=FBgn0259745.1;Parent=FBgn0259745.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=2390;mismatches=13;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	42668294	42668523	100	+	.	ID=FBgn0259745.1.mrna1.exon1;Name=FBgn0259745.1;Parent=FBgn0259745.1.mrna1;Target=FBgn0259745.1 1 230 +
Chr2	stalkie_big_nohaplotig	exon	42668604	42670455	99	+	.	ID=FBgn0259745.1.mrna1.exon2;Name=FBgn0259745.1;Parent=FBgn0259745.1.mrna1;Target=FBgn0259745.1 231 2082 +
Chr2	stalkie_big_nohaplotig	exon	42672063	42672215	100	+	.	ID=FBgn0259745.1.mrna1.exon3;Name=FBgn0259745.1;Parent=FBgn0259745.1.mrna1;Target=FBgn0259745.1 2083 2235 +
Chr2	stalkie_big_nohaplotig	exon	42672285	42672452	98	+	.	ID=FBgn0259745.1.mrna1.exon4;Name=FBgn0259745.1;Parent=FBgn0259745.1.mrna1;Target=FBgn0259745.1 2236 2403 +
Chr2	stalkie_big_nohaplotig	CDS	42668294	42668523	100	+	0	ID=FBgn0259745.1.mrna1.cds1;Name=FBgn0259745.1;Parent=FBgn0259745.1.mrna1;Target=FBgn0259745.1 1 230 +
Chr2	stalkie_big_nohaplotig	CDS	42668604	42670455	99	+	2	ID=FBgn0259745.1.mrna1.cds2;Name=FBgn0259745.1;Parent=FBgn0259745.1.mrna1;Target=FBgn0259745.1 231 2082 +
Chr2	stalkie_big_nohaplotig	CDS	42672063	42672215	100	+	0	ID=FBgn0259745.1.mrna1.cds3;Name=FBgn0259745.1;Parent=FBgn0259745.1.mrna1;Target=FBgn0259745.1 2083 2235 +
Chr2	stalkie_big_nohaplotig	CDS	42672285	42672452	98	+	0	ID=FBgn0259745.1.mrna1.cds4;Name=FBgn0259745.1;Parent=FBgn0259745.1.mrna1;Target=FBgn0259745.1 2236 2403 +
Chr2	stalkie_big_nohaplotig	mRNA	42635517	42649529	.	-	.	ID=FBgn0261397.1.mrna1;Name=FBgn0261397.1;Parent=FBgn0261397.1.path1;Dir=sensecoverage=100.0;identity=99.4;matches=5409;mismatches=33;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	42649476	42649529	100	-	.	ID=FBgn0261397.1.mrna1.exon1;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 1 54 +
Chr2	stalkie_big_nohaplotig	exon	42645425	42646238	99	-	.	ID=FBgn0261397.1.mrna1.exon2;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 55 868 +
Chr2	stalkie_big_nohaplotig	exon	42645241	42645365	98	-	.	ID=FBgn0261397.1.mrna1.exon3;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 869 993 +
Chr2	stalkie_big_nohaplotig	exon	42645066	42645179	98	-	.	ID=FBgn0261397.1.mrna1.exon4;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 994 1107 +
Chr2	stalkie_big_nohaplotig	exon	42644507	42644995	99	-	.	ID=FBgn0261397.1.mrna1.exon5;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 1108 1596 +
Chr2	stalkie_big_nohaplotig	exon	42644352	42644445	97	-	.	ID=FBgn0261397.1.mrna1.exon6;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 1597 1690 +
Chr2	stalkie_big_nohaplotig	exon	42644066	42644292	99	-	.	ID=FBgn0261397.1.mrna1.exon7;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 1691 1917 +
Chr2	stalkie_big_nohaplotig	exon	42642166	42642279	100	-	.	ID=FBgn0261397.1.mrna1.exon8;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 1918 2031 +
Chr2	stalkie_big_nohaplotig	exon	42641217	42642103	99	-	.	ID=FBgn0261397.1.mrna1.exon9;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 2032 2918 +
Chr2	stalkie_big_nohaplotig	exon	42640609	42641153	98	-	.	ID=FBgn0261397.1.mrna1.exon10;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 2919 3463 +
Chr2	stalkie_big_nohaplotig	exon	42639768	42639903	100	-	.	ID=FBgn0261397.1.mrna1.exon11;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 3464 3599 +
Chr2	stalkie_big_nohaplotig	exon	42639602	42639699	100	-	.	ID=FBgn0261397.1.mrna1.exon12;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 3600 3697 +
Chr2	stalkie_big_nohaplotig	exon	42638756	42638954	99	-	.	ID=FBgn0261397.1.mrna1.exon13;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 3698 3896 +
Chr2	stalkie_big_nohaplotig	exon	42638460	42638685	100	-	.	ID=FBgn0261397.1.mrna1.exon14;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 3897 4122 +
Chr2	stalkie_big_nohaplotig	exon	42637281	42637449	99	-	.	ID=FBgn0261397.1.mrna1.exon15;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 4123 4291 +
Chr2	stalkie_big_nohaplotig	exon	42637079	42637205	100	-	.	ID=FBgn0261397.1.mrna1.exon16;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 4292 4418 +
Chr2	stalkie_big_nohaplotig	exon	42636878	42637009	100	-	.	ID=FBgn0261397.1.mrna1.exon17;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 4419 4550 +
Chr2	stalkie_big_nohaplotig	exon	42636122	42636647	99	-	.	ID=FBgn0261397.1.mrna1.exon18;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 4551 5076 +
Chr2	stalkie_big_nohaplotig	exon	42635929	42636060	99	-	.	ID=FBgn0261397.1.mrna1.exon19;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 5077 5208 +
Chr2	stalkie_big_nohaplotig	exon	42635729	42635821	100	-	.	ID=FBgn0261397.1.mrna1.exon20;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 5209 5301 +
Chr2	stalkie_big_nohaplotig	exon	42635517	42635657	100	-	.	ID=FBgn0261397.1.mrna1.exon21;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 5302 5442 +
Chr2	stalkie_big_nohaplotig	CDS	42649476	42649529	100	-	0	ID=FBgn0261397.1.mrna1.cds1;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 1 54 +
Chr2	stalkie_big_nohaplotig	CDS	42645425	42646238	99	-	0	ID=FBgn0261397.1.mrna1.cds2;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 55 868 +
Chr2	stalkie_big_nohaplotig	CDS	42645241	42645365	98	-	1	ID=FBgn0261397.1.mrna1.cds3;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 869 993 +
Chr2	stalkie_big_nohaplotig	CDS	42645066	42645179	98	-	0	ID=FBgn0261397.1.mrna1.cds4;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 994 1107 +
Chr2	stalkie_big_nohaplotig	CDS	42644507	42644995	99	-	0	ID=FBgn0261397.1.mrna1.cds5;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 1108 1596 +
Chr2	stalkie_big_nohaplotig	CDS	42644352	42644445	97	-	0	ID=FBgn0261397.1.mrna1.cds6;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 1597 1690 +
Chr2	stalkie_big_nohaplotig	CDS	42644066	42644292	99	-	1	ID=FBgn0261397.1.mrna1.cds7;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 1691 1917 +
Chr2	stalkie_big_nohaplotig	CDS	42642166	42642279	100	-	0	ID=FBgn0261397.1.mrna1.cds8;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 1918 2031 +
Chr2	stalkie_big_nohaplotig	CDS	42641217	42642103	99	-	0	ID=FBgn0261397.1.mrna1.cds9;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 2032 2918 +
Chr2	stalkie_big_nohaplotig	CDS	42640609	42641153	98	-	2	ID=FBgn0261397.1.mrna1.cds10;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 2919 3463 +
Chr2	stalkie_big_nohaplotig	CDS	42639768	42639903	100	-	1	ID=FBgn0261397.1.mrna1.cds11;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 3464 3599 +
Chr2	stalkie_big_nohaplotig	CDS	42639602	42639699	100	-	2	ID=FBgn0261397.1.mrna1.cds12;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 3600 3697 +
Chr2	stalkie_big_nohaplotig	CDS	42638756	42638954	99	-	1	ID=FBgn0261397.1.mrna1.cds13;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 3698 3896 +
Chr2	stalkie_big_nohaplotig	CDS	42638460	42638685	100	-	2	ID=FBgn0261397.1.mrna1.cds14;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 3897 4122 +
Chr2	stalkie_big_nohaplotig	CDS	42637281	42637449	99	-	0	ID=FBgn0261397.1.mrna1.cds15;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 4123 4291 +
Chr2	stalkie_big_nohaplotig	CDS	42637079	42637205	100	-	1	ID=FBgn0261397.1.mrna1.cds16;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 4292 4418 +
Chr2	stalkie_big_nohaplotig	CDS	42636878	42637009	100	-	2	ID=FBgn0261397.1.mrna1.cds17;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 4419 4550 +
Chr2	stalkie_big_nohaplotig	CDS	42636122	42636647	99	-	2	ID=FBgn0261397.1.mrna1.cds18;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 4551 5076 +
Chr2	stalkie_big_nohaplotig	CDS	42635929	42636060	99	-	0	ID=FBgn0261397.1.mrna1.cds19;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 5077 5208 +
Chr2	stalkie_big_nohaplotig	CDS	42635729	42635821	100	-	0	ID=FBgn0261397.1.mrna1.cds20;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 5209 5301 +
Chr2	stalkie_big_nohaplotig	CDS	42635517	42635657	100	-	0	ID=FBgn0261397.1.mrna1.cds21;Name=FBgn0261397.1;Parent=FBgn0261397.1.mrna1;Target=FBgn0261397.1 5302 5442 +
Chr1	stalkie_big_nohaplotig	mRNA	137643175	137643916	.	-	.	ID=FBgn0010422.1.mrna2;Name=FBgn0010422.1;Parent=FBgn0010422.1.path2;Dir=indeterminatecoverage=95.9;identity=99.3;matches=737;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	137643175	137643916	99	-	.	ID=FBgn0010422.1.mrna2.exon1;Name=FBgn0010422.1;Parent=FBgn0010422.1.mrna2;Target=FBgn0010422.1 774 33 .
Chr1	stalkie_big_nohaplotig	CDS	137643175	137643916	99	-	2	ID=FBgn0010422.1.mrna2.cds1;Name=FBgn0010422.1;Parent=FBgn0010422.1.mrna2;Target=FBgn0010422.1 774 33 .
Chr2	stalkie_big_nohaplotig	mRNA	162697394	162698065	.	-	.	ID=FBgn0003607.3.mrna1;Name=FBgn0003607.3;Parent=FBgn0003607.3.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=672;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	162697394	162698065	100	-	.	ID=FBgn0003607.3.mrna1.exon1;Name=FBgn0003607.3;Parent=FBgn0003607.3.mrna1;Target=FBgn0003607.3 672 1 .
Chr2	stalkie_big_nohaplotig	CDS	162697394	162698065	100	-	0	ID=FBgn0003607.3.mrna1.cds1;Name=FBgn0003607.3;Parent=FBgn0003607.3.mrna1;Target=FBgn0003607.3 672 1 .
Chr2	stalkie_big_nohaplotig	mRNA	162696452	162697273	.	+	.	ID=FBgn0037262.1.mrna1;Name=FBgn0037262.1;Parent=FBgn0037262.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=632;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	162696452	162696566	100	+	.	ID=FBgn0037262.1.mrna1.exon1;Name=FBgn0037262.1;Parent=FBgn0037262.1.mrna1;Target=FBgn0037262.1 1 115 +
Chr2	stalkie_big_nohaplotig	exon	162696696	162696785	100	+	.	ID=FBgn0037262.1.mrna1.exon2;Name=FBgn0037262.1;Parent=FBgn0037262.1.mrna1;Target=FBgn0037262.1 116 205 +
Chr2	stalkie_big_nohaplotig	exon	162696846	162697273	99	+	.	ID=FBgn0037262.1.mrna1.exon3;Name=FBgn0037262.1;Parent=FBgn0037262.1.mrna1;Target=FBgn0037262.1 206 633 +
Chr2	stalkie_big_nohaplotig	CDS	162696452	162696566	100	+	0	ID=FBgn0037262.1.mrna1.cds1;Name=FBgn0037262.1;Parent=FBgn0037262.1.mrna1;Target=FBgn0037262.1 1 115 +
Chr2	stalkie_big_nohaplotig	CDS	162696696	162696785	100	+	1	ID=FBgn0037262.1.mrna1.cds2;Name=FBgn0037262.1;Parent=FBgn0037262.1.mrna1;Target=FBgn0037262.1 116 205 +
Chr2	stalkie_big_nohaplotig	CDS	162696846	162697273	99	+	1	ID=FBgn0037262.1.mrna1.cds3;Name=FBgn0037262.1;Parent=FBgn0037262.1.mrna1;Target=FBgn0037262.1 206 633 +
Chr2	stalkie_big_nohaplotig	mRNA	58111732	58118356	.	+	.	ID=FBgn0259238.1.mrna1;Name=FBgn0259238.1;Parent=FBgn0259238.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=435;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	58111732	58112065	100	+	.	ID=FBgn0259238.1.mrna1.exon1;Name=FBgn0259238.1;Parent=FBgn0259238.1.mrna1;Target=FBgn0259238.1 1 334 +
Chr2	stalkie_big_nohaplotig	exon	58118256	58118356	100	+	.	ID=FBgn0259238.1.mrna1.exon2;Name=FBgn0259238.1;Parent=FBgn0259238.1.mrna1;Target=FBgn0259238.1 335 435 +
Chr2	stalkie_big_nohaplotig	CDS	58111732	58112065	100	+	0	ID=FBgn0259238.1.mrna1.cds1;Name=FBgn0259238.1;Parent=FBgn0259238.1.mrna1;Target=FBgn0259238.1 1 334 +
Chr2	stalkie_big_nohaplotig	CDS	58118256	58118356	100	+	1	ID=FBgn0259238.1.mrna1.cds2;Name=FBgn0259238.1;Parent=FBgn0259238.1.mrna1;Target=FBgn0259238.1 335 435 +
Chr2	stalkie_big_nohaplotig	mRNA	58041548	58078280	.	+	.	ID=FBgn0261545.1.mrna1;Name=FBgn0261545.1;Parent=FBgn0261545.1.path1;Dir=sensecoverage=95.1;identity=99.9;matches=1833;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	58041548	58041710	100	+	.	ID=FBgn0261545.1.mrna1.exon1;Name=FBgn0261545.1;Parent=FBgn0261545.1.mrna1;Target=FBgn0261545.1 96 258 +
Chr2	stalkie_big_nohaplotig	exon	58049361	58049429	100	+	.	ID=FBgn0261545.1.mrna1.exon2;Name=FBgn0261545.1;Parent=FBgn0261545.1.mrna1;Target=FBgn0261545.1 259 327 +
Chr2	stalkie_big_nohaplotig	exon	58065657	58065709	100	+	.	ID=FBgn0261545.1.mrna1.exon3;Name=FBgn0261545.1;Parent=FBgn0261545.1.mrna1;Target=FBgn0261545.1 328 380 +
Chr2	stalkie_big_nohaplotig	exon	58071528	58071597	100	+	.	ID=FBgn0261545.1.mrna1.exon4;Name=FBgn0261545.1;Parent=FBgn0261545.1.mrna1;Target=FBgn0261545.1 381 450 +
Chr2	stalkie_big_nohaplotig	exon	58076669	58077229	100	+	.	ID=FBgn0261545.1.mrna1.exon5;Name=FBgn0261545.1;Parent=FBgn0261545.1.mrna1;Target=FBgn0261545.1 451 1011 +
Chr2	stalkie_big_nohaplotig	exon	58077291	58078037	99	+	.	ID=FBgn0261545.1.mrna1.exon6;Name=FBgn0261545.1;Parent=FBgn0261545.1.mrna1;Target=FBgn0261545.1 1012 1758 +
Chr2	stalkie_big_nohaplotig	exon	58078110	58078280	100	+	.	ID=FBgn0261545.1.mrna1.exon7;Name=FBgn0261545.1;Parent=FBgn0261545.1.mrna1;Target=FBgn0261545.1 1759 1929 +
Chr2	stalkie_big_nohaplotig	CDS	58041549	58041710	100	+	0	ID=FBgn0261545.1.mrna1.cds1;Name=FBgn0261545.1;Parent=FBgn0261545.1.mrna1;Target=FBgn0261545.1 97 258 +
Chr2	stalkie_big_nohaplotig	CDS	58049361	58049429	100	+	0	ID=FBgn0261545.1.mrna1.cds2;Name=FBgn0261545.1;Parent=FBgn0261545.1.mrna1;Target=FBgn0261545.1 259 327 +
Chr2	stalkie_big_nohaplotig	CDS	58065657	58065709	100	+	0	ID=FBgn0261545.1.mrna1.cds3;Name=FBgn0261545.1;Parent=FBgn0261545.1.mrna1;Target=FBgn0261545.1 328 380 +
Chr2	stalkie_big_nohaplotig	CDS	58071528	58071597	100	+	2	ID=FBgn0261545.1.mrna1.cds4;Name=FBgn0261545.1;Parent=FBgn0261545.1.mrna1;Target=FBgn0261545.1 381 450 +
Chr2	stalkie_big_nohaplotig	CDS	58076669	58077229	100	+	0	ID=FBgn0261545.1.mrna1.cds5;Name=FBgn0261545.1;Parent=FBgn0261545.1.mrna1;Target=FBgn0261545.1 451 1011 +
Chr2	stalkie_big_nohaplotig	CDS	58077291	58078037	99	+	0	ID=FBgn0261545.1.mrna1.cds6;Name=FBgn0261545.1;Parent=FBgn0261545.1.mrna1;Target=FBgn0261545.1 1012 1758 +
Chr2	stalkie_big_nohaplotig	CDS	58078110	58078280	100	+	0	ID=FBgn0261545.1.mrna1.cds7;Name=FBgn0261545.1;Parent=FBgn0261545.1.mrna1;Target=FBgn0261545.1 1759 1929 +
Chr1	stalkie_big_nohaplotig	mRNA	40483944	40496001	.	+	.	ID=FBgn0005386.1.mrna1;Name=FBgn0005386.1;Parent=FBgn0005386.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=7452;mismatches=26;indels=10;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	40483944	40484008	100	+	.	ID=FBgn0005386.1.mrna1.exon1;Name=FBgn0005386.1;Parent=FBgn0005386.1.mrna1;Target=FBgn0005386.1 1 65 +
Chr1	stalkie_big_nohaplotig	exon	40484065	40484760	98	+	.	ID=FBgn0005386.1.mrna1.exon2;Name=FBgn0005386.1;Parent=FBgn0005386.1.mrna1;Target=FBgn0005386.1 66 753 +
Chr1	stalkie_big_nohaplotig	exon	40484811	40489535	99	+	.	ID=FBgn0005386.1.mrna1.exon3;Name=FBgn0005386.1;Parent=FBgn0005386.1.mrna1;Target=FBgn0005386.1 754 5478 +
Chr1	stalkie_big_nohaplotig	exon	40489614	40489796	99	+	.	ID=FBgn0005386.1.mrna1.exon4;Name=FBgn0005386.1;Parent=FBgn0005386.1.mrna1;Target=FBgn0005386.1 5479 5661 +
Chr1	stalkie_big_nohaplotig	exon	40489859	40491319	99	+	.	ID=FBgn0005386.1.mrna1.exon5;Name=FBgn0005386.1;Parent=FBgn0005386.1.mrna1;Target=FBgn0005386.1 5662 7122 +
Chr1	stalkie_big_nohaplotig	exon	40491389	40491571	98	+	.	ID=FBgn0005386.1.mrna1.exon6;Name=FBgn0005386.1;Parent=FBgn0005386.1.mrna1;Target=FBgn0005386.1 7123 7305 +
Chr1	stalkie_big_nohaplotig	exon	40495828	40496001	99	+	.	ID=FBgn0005386.1.mrna1.exon7;Name=FBgn0005386.1;Parent=FBgn0005386.1.mrna1;Target=FBgn0005386.1 7306 7479 +
Chr1	stalkie_big_nohaplotig	CDS	40483946	40484008	100	+	0	ID=FBgn0005386.1.mrna1.cds1;Name=FBgn0005386.1;Parent=FBgn0005386.1.mrna1;Target=FBgn0005386.1 3 65 +
Chr1	stalkie_big_nohaplotig	CDS	40484065	40484135	98	+	0	ID=FBgn0005386.1.mrna1.cds2;Name=FBgn0005386.1;Parent=FBgn0005386.1.mrna1;Target=FBgn0005386.1 66 137 +
Chr2	stalkie_big_nohaplotig	mRNA	17393275	17398016	.	+	.	ID=FBgn0000157.1.mrna2;Name=FBgn0000157.1;Parent=FBgn0000157.1.path2;Dir=sensecoverage=43.4;identity=100.0;matches=462;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	17393275	17393419	100	+	.	ID=FBgn0000157.1.mrna2.exon1;Name=FBgn0000157.1;Parent=FBgn0000157.1.mrna2;Target=FBgn0000157.1 604 748 +
Chr2	stalkie_big_nohaplotig	exon	17396002	17396106	100	+	.	ID=FBgn0000157.1.mrna2.exon2;Name=FBgn0000157.1;Parent=FBgn0000157.1.mrna2;Target=FBgn0000157.1 749 853 +
Chr2	stalkie_big_nohaplotig	exon	17397805	17398016	100	+	.	ID=FBgn0000157.1.mrna2.exon3;Name=FBgn0000157.1;Parent=FBgn0000157.1.mrna2;Target=FBgn0000157.1 854 1065 +
Chr2	stalkie_big_nohaplotig	CDS	17393275	17393419	100	+	0	ID=FBgn0000157.1.mrna2.cds1;Name=FBgn0000157.1;Parent=FBgn0000157.1.mrna2;Target=FBgn0000157.1 604 748 +
Chr2	stalkie_big_nohaplotig	CDS	17396002	17396106	100	+	1	ID=FBgn0000157.1.mrna2.cds2;Name=FBgn0000157.1;Parent=FBgn0000157.1.mrna2;Target=FBgn0000157.1 749 853 +
Chr2	stalkie_big_nohaplotig	CDS	17397805	17398016	100	+	1	ID=FBgn0000157.1.mrna2.cds3;Name=FBgn0000157.1;Parent=FBgn0000157.1.mrna2;Target=FBgn0000157.1 854 1065 +
Chr2	stalkie_big_nohaplotig	mRNA	96501642	96505092	.	-	.	ID=FBgn0038768.1.mrna1;Name=FBgn0038768.1;Parent=FBgn0038768.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1324;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	96504910	96505092	100	-	.	ID=FBgn0038768.1.mrna1.exon1;Name=FBgn0038768.1;Parent=FBgn0038768.1.mrna1;Target=FBgn0038768.1 1 183 +
Chr2	stalkie_big_nohaplotig	exon	96504484	96504840	100	-	.	ID=FBgn0038768.1.mrna1.exon2;Name=FBgn0038768.1;Parent=FBgn0038768.1.mrna1;Target=FBgn0038768.1 184 540 +
Chr2	stalkie_big_nohaplotig	exon	96504035	96504411	100	-	.	ID=FBgn0038768.1.mrna1.exon3;Name=FBgn0038768.1;Parent=FBgn0038768.1.mrna1;Target=FBgn0038768.1 541 917 +
Chr2	stalkie_big_nohaplotig	exon	96502791	96502925	100	-	.	ID=FBgn0038768.1.mrna1.exon4;Name=FBgn0038768.1;Parent=FBgn0038768.1.mrna1;Target=FBgn0038768.1 918 1052 +
Chr2	stalkie_big_nohaplotig	exon	96501873	96501983	100	-	.	ID=FBgn0038768.1.mrna1.exon5;Name=FBgn0038768.1;Parent=FBgn0038768.1.mrna1;Target=FBgn0038768.1 1053 1163 +
Chr2	stalkie_big_nohaplotig	exon	96501642	96501804	98	-	.	ID=FBgn0038768.1.mrna1.exon6;Name=FBgn0038768.1;Parent=FBgn0038768.1.mrna1;Target=FBgn0038768.1 1164 1326 +
Chr2	stalkie_big_nohaplotig	CDS	96504910	96505092	100	-	0	ID=FBgn0038768.1.mrna1.cds1;Name=FBgn0038768.1;Parent=FBgn0038768.1.mrna1;Target=FBgn0038768.1 1 183 +
Chr2	stalkie_big_nohaplotig	CDS	96504484	96504840	100	-	0	ID=FBgn0038768.1.mrna1.cds2;Name=FBgn0038768.1;Parent=FBgn0038768.1.mrna1;Target=FBgn0038768.1 184 540 +
Chr2	stalkie_big_nohaplotig	CDS	96504035	96504411	100	-	0	ID=FBgn0038768.1.mrna1.cds3;Name=FBgn0038768.1;Parent=FBgn0038768.1.mrna1;Target=FBgn0038768.1 541 917 +
Chr2	stalkie_big_nohaplotig	CDS	96502791	96502925	100	-	2	ID=FBgn0038768.1.mrna1.cds4;Name=FBgn0038768.1;Parent=FBgn0038768.1.mrna1;Target=FBgn0038768.1 918 1052 +
Chr2	stalkie_big_nohaplotig	CDS	96501873	96501983	100	-	2	ID=FBgn0038768.1.mrna1.cds5;Name=FBgn0038768.1;Parent=FBgn0038768.1.mrna1;Target=FBgn0038768.1 1053 1163 +
Chr2	stalkie_big_nohaplotig	CDS	96501642	96501804	98	-	2	ID=FBgn0038768.1.mrna1.cds6;Name=FBgn0038768.1;Parent=FBgn0038768.1.mrna1;Target=FBgn0038768.1 1164 1326 +
ChrX	stalkie_big_nohaplotig	mRNA	40507844	40512502	.	-	.	ID=ORF23.mrna1;Name=ORF23;Parent=ORF23.path1;Dir=sensecoverage=100.0;identity=99.9;matches=4107;mismatches=3;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	40511228	40512502	99	-	.	ID=ORF23.mrna1.exon1;Name=ORF23;Parent=ORF23.mrna1;Target=ORF23 1 1275 +
ChrX	stalkie_big_nohaplotig	exon	40509064	40511164	99	-	.	ID=ORF23.mrna1.exon2;Name=ORF23;Parent=ORF23.mrna1;Target=ORF23 1276 3376 +
ChrX	stalkie_big_nohaplotig	exon	40507844	40508577	99	-	.	ID=ORF23.mrna1.exon3;Name=ORF23;Parent=ORF23.mrna1;Target=ORF23 3377 4110 +
ChrX	stalkie_big_nohaplotig	CDS	40511228	40512502	99	-	0	ID=ORF23.mrna1.cds1;Name=ORF23;Parent=ORF23.mrna1;Target=ORF23 1 1275 +
ChrX	stalkie_big_nohaplotig	CDS	40509064	40511164	99	-	0	ID=ORF23.mrna1.cds2;Name=ORF23;Parent=ORF23.mrna1;Target=ORF23 1276 3376 +
ChrX	stalkie_big_nohaplotig	CDS	40507844	40508577	99	-	1	ID=ORF23.mrna1.cds3;Name=ORF23;Parent=ORF23.mrna1;Target=ORF23 3377 4110 +
Chr2	stalkie_big_nohaplotig	mRNA	95691554	95692068	.	-	.	ID=FBgn0038387.1.mrna1;Name=FBgn0038387.1;Parent=FBgn0038387.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=459;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	95691834	95692068	100	-	.	ID=FBgn0038387.1.mrna1.exon1;Name=FBgn0038387.1;Parent=FBgn0038387.1.mrna1;Target=FBgn0038387.1 1 235 +
Chr2	stalkie_big_nohaplotig	exon	95691554	95691777	100	-	.	ID=FBgn0038387.1.mrna1.exon2;Name=FBgn0038387.1;Parent=FBgn0038387.1.mrna1;Target=FBgn0038387.1 236 459 +
Chr2	stalkie_big_nohaplotig	CDS	95691834	95692068	100	-	0	ID=FBgn0038387.1.mrna1.cds1;Name=FBgn0038387.1;Parent=FBgn0038387.1.mrna1;Target=FBgn0038387.1 1 235 +
Chr2	stalkie_big_nohaplotig	CDS	95691554	95691777	100	-	1	ID=FBgn0038387.1.mrna1.cds2;Name=FBgn0038387.1;Parent=FBgn0038387.1.mrna1;Target=FBgn0038387.1 236 459 +
Chr2	stalkie_big_nohaplotig	mRNA	95434439	95439266	.	+	.	ID=FBgn0037467.1.mrna1;Name=FBgn0037467.1;Parent=FBgn0037467.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=2344;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	95434439	95434527	100	+	.	ID=FBgn0037467.1.mrna1.exon1;Name=FBgn0037467.1;Parent=FBgn0037467.1.mrna1;Target=FBgn0037467.1 1 89 +
Chr2	stalkie_big_nohaplotig	exon	95434607	95434805	100	+	.	ID=FBgn0037467.1.mrna1.exon2;Name=FBgn0037467.1;Parent=FBgn0037467.1.mrna1;Target=FBgn0037467.1 90 288 +
Chr2	stalkie_big_nohaplotig	exon	95436242	95436712	100	+	.	ID=FBgn0037467.1.mrna1.exon3;Name=FBgn0037467.1;Parent=FBgn0037467.1.mrna1;Target=FBgn0037467.1 289 759 +
Chr2	stalkie_big_nohaplotig	exon	95436773	95437103	100	+	.	ID=FBgn0037467.1.mrna1.exon4;Name=FBgn0037467.1;Parent=FBgn0037467.1.mrna1;Target=FBgn0037467.1 760 1090 +
Chr2	stalkie_big_nohaplotig	exon	95437170	95437629	99	+	.	ID=FBgn0037467.1.mrna1.exon5;Name=FBgn0037467.1;Parent=FBgn0037467.1.mrna1;Target=FBgn0037467.1 1091 1550 +
Chr2	stalkie_big_nohaplotig	exon	95437692	95437836	100	+	.	ID=FBgn0037467.1.mrna1.exon6;Name=FBgn0037467.1;Parent=FBgn0037467.1.mrna1;Target=FBgn0037467.1 1551 1695 +
Chr2	stalkie_big_nohaplotig	exon	95438104	95438269	100	+	.	ID=FBgn0037467.1.mrna1.exon7;Name=FBgn0037467.1;Parent=FBgn0037467.1.mrna1;Target=FBgn0037467.1 1696 1861 +
Chr2	stalkie_big_nohaplotig	exon	95438332	95438679	100	+	.	ID=FBgn0037467.1.mrna1.exon8;Name=FBgn0037467.1;Parent=FBgn0037467.1.mrna1;Target=FBgn0037467.1 1862 2209 +
Chr2	stalkie_big_nohaplotig	exon	95439130	95439266	100	+	.	ID=FBgn0037467.1.mrna1.exon9;Name=FBgn0037467.1;Parent=FBgn0037467.1.mrna1;Target=FBgn0037467.1 2210 2346 +
Chr2	stalkie_big_nohaplotig	CDS	95434439	95434527	100	+	0	ID=FBgn0037467.1.mrna1.cds1;Name=FBgn0037467.1;Parent=FBgn0037467.1.mrna1;Target=FBgn0037467.1 1 89 +
Chr2	stalkie_big_nohaplotig	CDS	95434607	95434805	100	+	2	ID=FBgn0037467.1.mrna1.cds2;Name=FBgn0037467.1;Parent=FBgn0037467.1.mrna1;Target=FBgn0037467.1 90 288 +
Chr2	stalkie_big_nohaplotig	CDS	95436242	95436712	100	+	0	ID=FBgn0037467.1.mrna1.cds3;Name=FBgn0037467.1;Parent=FBgn0037467.1.mrna1;Target=FBgn0037467.1 289 759 +
Chr2	stalkie_big_nohaplotig	CDS	95436773	95437103	100	+	0	ID=FBgn0037467.1.mrna1.cds4;Name=FBgn0037467.1;Parent=FBgn0037467.1.mrna1;Target=FBgn0037467.1 760 1090 +
Chr2	stalkie_big_nohaplotig	CDS	95437170	95437629	99	+	1	ID=FBgn0037467.1.mrna1.cds5;Name=FBgn0037467.1;Parent=FBgn0037467.1.mrna1;Target=FBgn0037467.1 1091 1550 +
Chr2	stalkie_big_nohaplotig	CDS	95437692	95437836	100	+	2	ID=FBgn0037467.1.mrna1.cds6;Name=FBgn0037467.1;Parent=FBgn0037467.1.mrna1;Target=FBgn0037467.1 1551 1695 +
Chr2	stalkie_big_nohaplotig	CDS	95438104	95438269	100	+	0	ID=FBgn0037467.1.mrna1.cds7;Name=FBgn0037467.1;Parent=FBgn0037467.1.mrna1;Target=FBgn0037467.1 1696 1861 +
Chr2	stalkie_big_nohaplotig	CDS	95438332	95438679	100	+	1	ID=FBgn0037467.1.mrna1.cds8;Name=FBgn0037467.1;Parent=FBgn0037467.1.mrna1;Target=FBgn0037467.1 1862 2209 +
Chr2	stalkie_big_nohaplotig	CDS	95439130	95439266	100	+	1	ID=FBgn0037467.1.mrna1.cds9;Name=FBgn0037467.1;Parent=FBgn0037467.1.mrna1;Target=FBgn0037467.1 2210 2346 +
Chr2	stalkie_big_nohaplotig	mRNA	9740741	9743916	.	+	.	ID=FBgn0033740.2.mrna1;Name=FBgn0033740.2;Parent=FBgn0033740.2.path1;Dir=sensecoverage=100.0;identity=98.7;matches=1942;mismatches=26;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	9740741	9740853	99	+	.	ID=FBgn0033740.2.mrna1.exon1;Name=FBgn0033740.2;Parent=FBgn0033740.2.mrna1;Target=FBgn0033740.2 1 113 +
Chr2	stalkie_big_nohaplotig	exon	9740909	9741047	98	+	.	ID=FBgn0033740.2.mrna1.exon2;Name=FBgn0033740.2;Parent=FBgn0033740.2.mrna1;Target=FBgn0033740.2 114 252 +
Chr2	stalkie_big_nohaplotig	exon	9741112	9741256	100	+	.	ID=FBgn0033740.2.mrna1.exon3;Name=FBgn0033740.2;Parent=FBgn0033740.2.mrna1;Target=FBgn0033740.2 253 397 +
Chr2	stalkie_big_nohaplotig	exon	9742076	9742327	98	+	.	ID=FBgn0033740.2.mrna1.exon4;Name=FBgn0033740.2;Parent=FBgn0033740.2.mrna1;Target=FBgn0033740.2 398 649 +
Chr2	stalkie_big_nohaplotig	exon	9742409	9742917	99	+	.	ID=FBgn0033740.2.mrna1.exon5;Name=FBgn0033740.2;Parent=FBgn0033740.2.mrna1;Target=FBgn0033740.2 650 1158 +
Chr2	stalkie_big_nohaplotig	exon	9742988	9743451	98	+	.	ID=FBgn0033740.2.mrna1.exon6;Name=FBgn0033740.2;Parent=FBgn0033740.2.mrna1;Target=FBgn0033740.2 1159 1622 +
Chr2	stalkie_big_nohaplotig	exon	9743503	9743690	99	+	.	ID=FBgn0033740.2.mrna1.exon7;Name=FBgn0033740.2;Parent=FBgn0033740.2.mrna1;Target=FBgn0033740.2 1623 1810 +
Chr2	stalkie_big_nohaplotig	exon	9743759	9743916	95	+	.	ID=FBgn0033740.2.mrna1.exon8;Name=FBgn0033740.2;Parent=FBgn0033740.2.mrna1;Target=FBgn0033740.2 1811 1968 +
Chr2	stalkie_big_nohaplotig	CDS	9740741	9740853	99	+	0	ID=FBgn0033740.2.mrna1.cds1;Name=FBgn0033740.2;Parent=FBgn0033740.2.mrna1;Target=FBgn0033740.2 1 113 +
Chr2	stalkie_big_nohaplotig	CDS	9740909	9741047	98	+	2	ID=FBgn0033740.2.mrna1.cds2;Name=FBgn0033740.2;Parent=FBgn0033740.2.mrna1;Target=FBgn0033740.2 114 252 +
Chr2	stalkie_big_nohaplotig	CDS	9741112	9741256	100	+	0	ID=FBgn0033740.2.mrna1.cds3;Name=FBgn0033740.2;Parent=FBgn0033740.2.mrna1;Target=FBgn0033740.2 253 397 +
Chr2	stalkie_big_nohaplotig	CDS	9742076	9742327	98	+	1	ID=FBgn0033740.2.mrna1.cds4;Name=FBgn0033740.2;Parent=FBgn0033740.2.mrna1;Target=FBgn0033740.2 398 649 +
Chr2	stalkie_big_nohaplotig	CDS	9742409	9742917	99	+	1	ID=FBgn0033740.2.mrna1.cds5;Name=FBgn0033740.2;Parent=FBgn0033740.2.mrna1;Target=FBgn0033740.2 650 1158 +
Chr2	stalkie_big_nohaplotig	CDS	9742988	9743451	98	+	0	ID=FBgn0033740.2.mrna1.cds6;Name=FBgn0033740.2;Parent=FBgn0033740.2.mrna1;Target=FBgn0033740.2 1159 1622 +
Chr2	stalkie_big_nohaplotig	CDS	9743503	9743690	99	+	2	ID=FBgn0033740.2.mrna1.cds7;Name=FBgn0033740.2;Parent=FBgn0033740.2.mrna1;Target=FBgn0033740.2 1623 1810 +
Chr2	stalkie_big_nohaplotig	CDS	9743759	9743916	95	+	1	ID=FBgn0033740.2.mrna1.cds8;Name=FBgn0033740.2;Parent=FBgn0033740.2.mrna1;Target=FBgn0033740.2 1811 1968 +
Chr2	stalkie_big_nohaplotig	mRNA	18141369	18150869	.	+	.	ID=FBgn0003396.1.mrna1;Name=FBgn0003396.1;Parent=FBgn0003396.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=8244;mismatches=9;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	18141369	18142567	100	+	.	ID=FBgn0003396.1.mrna1.exon1;Name=FBgn0003396.1;Parent=FBgn0003396.1.mrna1;Target=FBgn0003396.1 1 1199 +
Chr2	stalkie_big_nohaplotig	exon	18142643	18142766	100	+	.	ID=FBgn0003396.1.mrna1.exon2;Name=FBgn0003396.1;Parent=FBgn0003396.1.mrna1;Target=FBgn0003396.1 1200 1323 +
Chr2	stalkie_big_nohaplotig	exon	18143663	18144814	100	+	.	ID=FBgn0003396.1.mrna1.exon3;Name=FBgn0003396.1;Parent=FBgn0003396.1.mrna1;Target=FBgn0003396.1 1324 2475 +
Chr2	stalkie_big_nohaplotig	exon	18144892	18148280	99	+	.	ID=FBgn0003396.1.mrna1.exon4;Name=FBgn0003396.1;Parent=FBgn0003396.1.mrna1;Target=FBgn0003396.1 2476 5864 +
Chr2	stalkie_big_nohaplotig	exon	18148354	18148580	100	+	.	ID=FBgn0003396.1.mrna1.exon5;Name=FBgn0003396.1;Parent=FBgn0003396.1.mrna1;Target=FBgn0003396.1 5865 6091 +
Chr2	stalkie_big_nohaplotig	exon	18148649	18150126	100	+	.	ID=FBgn0003396.1.mrna1.exon6;Name=FBgn0003396.1;Parent=FBgn0003396.1.mrna1;Target=FBgn0003396.1 6092 7569 +
Chr2	stalkie_big_nohaplotig	exon	18150186	18150869	98	+	.	ID=FBgn0003396.1.mrna1.exon7;Name=FBgn0003396.1;Parent=FBgn0003396.1.mrna1;Target=FBgn0003396.1 7570 8253 +
Chr2	stalkie_big_nohaplotig	CDS	18141369	18142567	100	+	0	ID=FBgn0003396.1.mrna1.cds1;Name=FBgn0003396.1;Parent=FBgn0003396.1.mrna1;Target=FBgn0003396.1 1 1199 +
Chr2	stalkie_big_nohaplotig	CDS	18142643	18142766	100	+	2	ID=FBgn0003396.1.mrna1.cds2;Name=FBgn0003396.1;Parent=FBgn0003396.1.mrna1;Target=FBgn0003396.1 1200 1323 +
Chr2	stalkie_big_nohaplotig	CDS	18143663	18144814	100	+	0	ID=FBgn0003396.1.mrna1.cds3;Name=FBgn0003396.1;Parent=FBgn0003396.1.mrna1;Target=FBgn0003396.1 1324 2475 +
Chr2	stalkie_big_nohaplotig	CDS	18144892	18148280	99	+	0	ID=FBgn0003396.1.mrna1.cds4;Name=FBgn0003396.1;Parent=FBgn0003396.1.mrna1;Target=FBgn0003396.1 2476 5864 +
Chr2	stalkie_big_nohaplotig	CDS	18148354	18148580	100	+	2	ID=FBgn0003396.1.mrna1.cds5;Name=FBgn0003396.1;Parent=FBgn0003396.1.mrna1;Target=FBgn0003396.1 5865 6091 +
Chr2	stalkie_big_nohaplotig	CDS	18148649	18150126	100	+	1	ID=FBgn0003396.1.mrna1.cds6;Name=FBgn0003396.1;Parent=FBgn0003396.1.mrna1;Target=FBgn0003396.1 6092 7569 +
Chr2	stalkie_big_nohaplotig	CDS	18150186	18150869	98	+	0	ID=FBgn0003396.1.mrna1.cds7;Name=FBgn0003396.1;Parent=FBgn0003396.1.mrna1;Target=FBgn0003396.1 7570 8253 +
Chr1	stalkie_big_nohaplotig	mRNA	128089896	128092623	.	+	.	ID=FBgn0040376.1.mrna1;Name=FBgn0040376.1;Parent=FBgn0040376.1.path1;Dir=sensecoverage=99.7;identity=99.5;matches=649;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	128089896	128090106	98	+	.	ID=FBgn0040376.1.mrna1.exon1;Name=FBgn0040376.1;Parent=FBgn0040376.1.mrna1;Target=FBgn0040376.1 3 213 +
Chr1	stalkie_big_nohaplotig	exon	128090164	128090433	100	+	.	ID=FBgn0040376.1.mrna1.exon2;Name=FBgn0040376.1;Parent=FBgn0040376.1.mrna1;Target=FBgn0040376.1 214 483 +
Chr1	stalkie_big_nohaplotig	exon	128092453	128092623	100	+	.	ID=FBgn0040376.1.mrna1.exon3;Name=FBgn0040376.1;Parent=FBgn0040376.1.mrna1;Target=FBgn0040376.1 484 654 +
Chr1	stalkie_big_nohaplotig	CDS	128089897	128090106	98	+	0	ID=FBgn0040376.1.mrna1.cds1;Name=FBgn0040376.1;Parent=FBgn0040376.1.mrna1;Target=FBgn0040376.1 4 213 +
Chr1	stalkie_big_nohaplotig	CDS	128090164	128090433	100	+	0	ID=FBgn0040376.1.mrna1.cds2;Name=FBgn0040376.1;Parent=FBgn0040376.1.mrna1;Target=FBgn0040376.1 214 483 +
Chr1	stalkie_big_nohaplotig	CDS	128092453	128092623	100	+	0	ID=FBgn0040376.1.mrna1.cds3;Name=FBgn0040376.1;Parent=FBgn0040376.1.mrna1;Target=FBgn0040376.1 484 654 +
Chr1	stalkie_big_nohaplotig	mRNA	128039418	128068409	.	+	.	ID=FBgn0030001.1.mrna1;Name=FBgn0030001.1;Parent=FBgn0030001.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=1657;mismatches=11;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	128039418	128040091	99	+	.	ID=FBgn0030001.1.mrna1.exon1;Name=FBgn0030001.1;Parent=FBgn0030001.1.mrna1;Target=FBgn0030001.1 1 674 +
Chr1	stalkie_big_nohaplotig	exon	128045804	128046158	99	+	.	ID=FBgn0030001.1.mrna1.exon2;Name=FBgn0030001.1;Parent=FBgn0030001.1.mrna1;Target=FBgn0030001.1 675 1029 +
Chr1	stalkie_big_nohaplotig	exon	128060769	128060945	100	+	.	ID=FBgn0030001.1.mrna1.exon3;Name=FBgn0030001.1;Parent=FBgn0030001.1.mrna1;Target=FBgn0030001.1 1030 1206 +
Chr1	stalkie_big_nohaplotig	exon	128066251	128066392	99	+	.	ID=FBgn0030001.1.mrna1.exon4;Name=FBgn0030001.1;Parent=FBgn0030001.1.mrna1;Target=FBgn0030001.1 1207 1348 +
Chr1	stalkie_big_nohaplotig	exon	128066467	128066701	98	+	.	ID=FBgn0030001.1.mrna1.exon5;Name=FBgn0030001.1;Parent=FBgn0030001.1.mrna1;Target=FBgn0030001.1 1349 1583 +
Chr1	stalkie_big_nohaplotig	exon	128068325	128068409	98	+	.	ID=FBgn0030001.1.mrna1.exon6;Name=FBgn0030001.1;Parent=FBgn0030001.1.mrna1;Target=FBgn0030001.1 1584 1668 +
Chr1	stalkie_big_nohaplotig	CDS	128039418	128040091	99	+	0	ID=FBgn0030001.1.mrna1.cds1;Name=FBgn0030001.1;Parent=FBgn0030001.1.mrna1;Target=FBgn0030001.1 1 674 +
Chr1	stalkie_big_nohaplotig	CDS	128045804	128046158	99	+	2	ID=FBgn0030001.1.mrna1.cds2;Name=FBgn0030001.1;Parent=FBgn0030001.1.mrna1;Target=FBgn0030001.1 675 1029 +
Chr1	stalkie_big_nohaplotig	CDS	128060769	128060945	100	+	0	ID=FBgn0030001.1.mrna1.cds3;Name=FBgn0030001.1;Parent=FBgn0030001.1.mrna1;Target=FBgn0030001.1 1030 1206 +
Chr1	stalkie_big_nohaplotig	CDS	128066251	128066392	99	+	0	ID=FBgn0030001.1.mrna1.cds4;Name=FBgn0030001.1;Parent=FBgn0030001.1.mrna1;Target=FBgn0030001.1 1207 1348 +
Chr1	stalkie_big_nohaplotig	CDS	128066467	128066701	98	+	1	ID=FBgn0030001.1.mrna1.cds5;Name=FBgn0030001.1;Parent=FBgn0030001.1.mrna1;Target=FBgn0030001.1 1349 1583 +
Chr1	stalkie_big_nohaplotig	CDS	128068325	128068409	98	+	2	ID=FBgn0030001.1.mrna1.cds6;Name=FBgn0030001.1;Parent=FBgn0030001.1.mrna1;Target=FBgn0030001.1 1584 1668 +
Chr1	stalkie_big_nohaplotig	mRNA	128007496	128008923	.	+	.	ID=FBgn0025800.1.mrna1;Name=FBgn0025800.1;Parent=FBgn0025800.1.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1428;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	128007496	128008923	100	+	.	ID=FBgn0025800.1.mrna1.exon1;Name=FBgn0025800.1;Parent=FBgn0025800.1.mrna1;Target=FBgn0025800.1 1428 1 .
Chr1	stalkie_big_nohaplotig	CDS	128007496	128008923	100	+	0	ID=FBgn0025800.1.mrna1.cds1;Name=FBgn0025800.1;Parent=FBgn0025800.1.mrna1;Target=FBgn0025800.1 1428 1 .
ChrX	stalkie_big_nohaplotig	mRNA	56434622	56435551	.	-	.	ID=ORF2944.mrna1;Name=ORF2944;Parent=ORF2944.path1;Dir=sensecoverage=100.0;identity=99.1;matches=779;mismatches=7;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	56435380	56435551	100	-	.	ID=ORF2944.mrna1.exon1;Name=ORF2944;Parent=ORF2944.mrna1;Target=ORF2944 1 172 +
ChrX	stalkie_big_nohaplotig	exon	56435194	56435309	100	-	.	ID=ORF2944.mrna1.exon2;Name=ORF2944;Parent=ORF2944.mrna1;Target=ORF2944 173 288 +
ChrX	stalkie_big_nohaplotig	exon	56434622	56435119	98	-	.	ID=ORF2944.mrna1.exon3;Name=ORF2944;Parent=ORF2944.mrna1;Target=ORF2944 289 786 +
ChrX	stalkie_big_nohaplotig	CDS	56435380	56435551	100	-	0	ID=ORF2944.mrna1.cds1;Name=ORF2944;Parent=ORF2944.mrna1;Target=ORF2944 1 172 +
ChrX	stalkie_big_nohaplotig	CDS	56435194	56435309	100	-	1	ID=ORF2944.mrna1.cds2;Name=ORF2944;Parent=ORF2944.mrna1;Target=ORF2944 173 288 +
ChrX	stalkie_big_nohaplotig	CDS	56434622	56435119	98	-	0	ID=ORF2944.mrna1.cds3;Name=ORF2944;Parent=ORF2944.mrna1;Target=ORF2944 289 786 +
ChrX	stalkie_big_nohaplotig	mRNA	57653871	57654800	.	+	.	ID=ORF2944.mrna2;Name=ORF2944;Parent=ORF2944.path2;Dir=sensecoverage=100.0;identity=98.7;matches=776;mismatches=10;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	57653871	57654042	98	+	.	ID=ORF2944.mrna2.exon1;Name=ORF2944;Parent=ORF2944.mrna2;Target=ORF2944 1 172 +
ChrX	stalkie_big_nohaplotig	exon	57654113	57654228	98	+	.	ID=ORF2944.mrna2.exon2;Name=ORF2944;Parent=ORF2944.mrna2;Target=ORF2944 173 288 +
ChrX	stalkie_big_nohaplotig	exon	57654303	57654800	98	+	.	ID=ORF2944.mrna2.exon3;Name=ORF2944;Parent=ORF2944.mrna2;Target=ORF2944 289 786 +
ChrX	stalkie_big_nohaplotig	CDS	57653871	57654042	98	+	0	ID=ORF2944.mrna2.cds1;Name=ORF2944;Parent=ORF2944.mrna2;Target=ORF2944 1 172 +
ChrX	stalkie_big_nohaplotig	CDS	57654113	57654228	98	+	1	ID=ORF2944.mrna2.cds2;Name=ORF2944;Parent=ORF2944.mrna2;Target=ORF2944 173 288 +
ChrX	stalkie_big_nohaplotig	CDS	57654303	57654800	98	+	0	ID=ORF2944.mrna2.cds3;Name=ORF2944;Parent=ORF2944.mrna2;Target=ORF2944 289 786 +
ChrX	stalkie_big_nohaplotig	mRNA	57521190	57521738	.	+	.	ID=FBgn0031068.2.mrna2;Name=FBgn0031068.2;Parent=FBgn0031068.2.path2;Dir=sensecoverage=100.0;identity=98.4;matches=481;mismatches=8;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	57521190	57521202	100	+	.	ID=FBgn0031068.2.mrna2.exon1;Name=FBgn0031068.2;Parent=FBgn0031068.2.mrna2;Target=FBgn0031068.2 1 13 +
ChrX	stalkie_big_nohaplotig	exon	57521263	57521738	98	+	.	ID=FBgn0031068.2.mrna2.exon2;Name=FBgn0031068.2;Parent=FBgn0031068.2.mrna2;Target=FBgn0031068.2 14 489 +
ChrX	stalkie_big_nohaplotig	CDS	57521190	57521202	100	+	0	ID=FBgn0031068.2.mrna2.cds1;Name=FBgn0031068.2;Parent=FBgn0031068.2.mrna2;Target=FBgn0031068.2 1 13 +
ChrX	stalkie_big_nohaplotig	CDS	57521263	57521738	98	+	1	ID=FBgn0031068.2.mrna2.cds2;Name=FBgn0031068.2;Parent=FBgn0031068.2.mrna2;Target=FBgn0031068.2 14 489 +
Chr2	stalkie_big_nohaplotig	mRNA	39870454	39871277	.	-	.	ID=AAEL012638.1.mrna1;Name=AAEL012638.1;Parent=AAEL012638.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=371;mismatches=0;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	39870939	39871277	99	-	.	ID=AAEL012638.1.mrna1.exon1;Name=AAEL012638.1;Parent=AAEL012638.1.mrna1;Target=AAEL012638.1 1 340 +
Chr2	stalkie_big_nohaplotig	exon	39870454	39870485	100	-	.	ID=AAEL012638.1.mrna1.exon2;Name=AAEL012638.1;Parent=AAEL012638.1.mrna1;Target=AAEL012638.1 341 372 +
Chr2	stalkie_big_nohaplotig	CDS	39871229	39871275	97	-	0	ID=AAEL012638.1.mrna1.cds1;Name=AAEL012638.1;Parent=AAEL012638.1.mrna1;Target=AAEL012638.1 3 50 +
Chr1	stalkie_big_nohaplotig	mRNA	5522957	5535399	.	+	.	ID=FBgn0263930.1.mrna1;Name=FBgn0263930.1;Parent=FBgn0263930.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1292;mismatches=1;indels=3;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	5522957	5523378	99	+	.	ID=FBgn0263930.1.mrna1.exon1;Name=FBgn0263930.1;Parent=FBgn0263930.1.mrna1;Target=FBgn0263930.1 1 419 +
Chr1	stalkie_big_nohaplotig	exon	5523621	5523810	100	+	.	ID=FBgn0263930.1.mrna1.exon2;Name=FBgn0263930.1;Parent=FBgn0263930.1.mrna1;Target=FBgn0263930.1 420 609 +
Chr1	stalkie_big_nohaplotig	exon	5533411	5533580	100	+	.	ID=FBgn0263930.1.mrna1.exon3;Name=FBgn0263930.1;Parent=FBgn0263930.1.mrna1;Target=FBgn0263930.1 610 779 +
Chr1	stalkie_big_nohaplotig	exon	5534697	5534904	100	+	.	ID=FBgn0263930.1.mrna1.exon4;Name=FBgn0263930.1;Parent=FBgn0263930.1.mrna1;Target=FBgn0263930.1 780 987 +
Chr1	stalkie_big_nohaplotig	exon	5534973	5535117	100	+	.	ID=FBgn0263930.1.mrna1.exon5;Name=FBgn0263930.1;Parent=FBgn0263930.1.mrna1;Target=FBgn0263930.1 988 1132 +
Chr1	stalkie_big_nohaplotig	exon	5535239	5535399	100	+	.	ID=FBgn0263930.1.mrna1.exon6;Name=FBgn0263930.1;Parent=FBgn0263930.1.mrna1;Target=FBgn0263930.1 1133 1293 +
Chr1	stalkie_big_nohaplotig	CDS	5522957	5523378	99	+	0	ID=FBgn0263930.1.mrna1.cds1;Name=FBgn0263930.1;Parent=FBgn0263930.1.mrna1;Target=FBgn0263930.1 1 419 +
Chr1	stalkie_big_nohaplotig	CDS	5523621	5523810	100	+	2	ID=FBgn0263930.1.mrna1.cds2;Name=FBgn0263930.1;Parent=FBgn0263930.1.mrna1;Target=FBgn0263930.1 420 609 +
Chr1	stalkie_big_nohaplotig	CDS	5533411	5533580	100	+	0	ID=FBgn0263930.1.mrna1.cds3;Name=FBgn0263930.1;Parent=FBgn0263930.1.mrna1;Target=FBgn0263930.1 610 779 +
Chr1	stalkie_big_nohaplotig	CDS	5534697	5534904	100	+	2	ID=FBgn0263930.1.mrna1.cds4;Name=FBgn0263930.1;Parent=FBgn0263930.1.mrna1;Target=FBgn0263930.1 780 987 +
Chr1	stalkie_big_nohaplotig	CDS	5534973	5535117	100	+	0	ID=FBgn0263930.1.mrna1.cds5;Name=FBgn0263930.1;Parent=FBgn0263930.1.mrna1;Target=FBgn0263930.1 988 1132 +
Chr1	stalkie_big_nohaplotig	CDS	5535239	5535399	100	+	1	ID=FBgn0263930.1.mrna1.cds6;Name=FBgn0263930.1;Parent=FBgn0263930.1.mrna1;Target=FBgn0263930.1 1133 1293 +
Chr2	stalkie_big_nohaplotig	mRNA	17931975	17933045	.	+	.	ID=FBgn0034712.mrna1;Name=FBgn0034712;Parent=FBgn0034712.path1;Dir=sensecoverage=100.0;identity=99.8;matches=922;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	17931975	17932074	100	+	.	ID=FBgn0034712.mrna1.exon1;Name=FBgn0034712;Parent=FBgn0034712.mrna1;Target=FBgn0034712 1 100 +
Chr2	stalkie_big_nohaplotig	exon	17932147	17932475	100	+	.	ID=FBgn0034712.mrna1.exon2;Name=FBgn0034712;Parent=FBgn0034712.mrna1;Target=FBgn0034712 101 429 +
Chr2	stalkie_big_nohaplotig	exon	17932551	17933045	99	+	.	ID=FBgn0034712.mrna1.exon3;Name=FBgn0034712;Parent=FBgn0034712.mrna1;Target=FBgn0034712 430 924 +
Chr2	stalkie_big_nohaplotig	CDS	17931975	17932074	100	+	0	ID=FBgn0034712.mrna1.cds1;Name=FBgn0034712;Parent=FBgn0034712.mrna1;Target=FBgn0034712 1 100 +
Chr2	stalkie_big_nohaplotig	CDS	17932147	17932475	100	+	1	ID=FBgn0034712.mrna1.cds2;Name=FBgn0034712;Parent=FBgn0034712.mrna1;Target=FBgn0034712 101 429 +
Chr2	stalkie_big_nohaplotig	CDS	17932551	17933045	99	+	0	ID=FBgn0034712.mrna1.cds3;Name=FBgn0034712;Parent=FBgn0034712.mrna1;Target=FBgn0034712 430 924 +
Chr2	stalkie_big_nohaplotig	mRNA	11071346	11072619	.	+	.	ID=ORF2231.mrna2;Name=ORF2231;Parent=ORF2231.path2;Dir=sensecoverage=100.0;identity=98.9;matches=884;mismatches=10;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	11071346	11071694	98	+	.	ID=ORF2231.mrna2.exon1;Name=ORF2231;Parent=ORF2231.mrna2;Target=ORF2231 1 349 +
Chr2	stalkie_big_nohaplotig	exon	11071872	11072095	98	+	.	ID=ORF2231.mrna2.exon2;Name=ORF2231;Parent=ORF2231.mrna2;Target=ORF2231 350 573 +
Chr2	stalkie_big_nohaplotig	exon	11072177	11072261	98	+	.	ID=ORF2231.mrna2.exon3;Name=ORF2231;Parent=ORF2231.mrna2;Target=ORF2231 574 658 +
Chr2	stalkie_big_nohaplotig	exon	11072384	11072619	99	+	.	ID=ORF2231.mrna2.exon4;Name=ORF2231;Parent=ORF2231.mrna2;Target=ORF2231 659 894 +
Chr2	stalkie_big_nohaplotig	CDS	11071346	11071694	98	+	0	ID=ORF2231.mrna2.cds1;Name=ORF2231;Parent=ORF2231.mrna2;Target=ORF2231 1 349 +
Chr2	stalkie_big_nohaplotig	CDS	11071872	11072095	98	+	1	ID=ORF2231.mrna2.cds2;Name=ORF2231;Parent=ORF2231.mrna2;Target=ORF2231 350 573 +
Chr2	stalkie_big_nohaplotig	CDS	11072177	11072261	98	+	0	ID=ORF2231.mrna2.cds3;Name=ORF2231;Parent=ORF2231.mrna2;Target=ORF2231 574 658 +
Chr2	stalkie_big_nohaplotig	CDS	11072384	11072619	99	+	1	ID=ORF2231.mrna2.cds4;Name=ORF2231;Parent=ORF2231.mrna2;Target=ORF2231 659 894 +
Chr1	stalkie_big_nohaplotig	mRNA	145806480	145808635	.	+	.	ID=FBgn0030925.3.mrna1;Name=FBgn0030925.3;Parent=FBgn0030925.3.path1;Dir=sensecoverage=100.0;identity=98.0;matches=1238;mismatches=25;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	145806480	145806675	95	+	.	ID=FBgn0030925.3.mrna1.exon1;Name=FBgn0030925.3;Parent=FBgn0030925.3.mrna1;Target=FBgn0030925.3 1 196 +
Chr1	stalkie_big_nohaplotig	exon	145807133	145807319	98	+	.	ID=FBgn0030925.3.mrna1.exon2;Name=FBgn0030925.3;Parent=FBgn0030925.3.mrna1;Target=FBgn0030925.3 197 383 +
Chr1	stalkie_big_nohaplotig	exon	145807431	145807495	100	+	.	ID=FBgn0030925.3.mrna1.exon3;Name=FBgn0030925.3;Parent=FBgn0030925.3.mrna1;Target=FBgn0030925.3 384 448 +
Chr1	stalkie_big_nohaplotig	exon	145807689	145807981	98	+	.	ID=FBgn0030925.3.mrna1.exon4;Name=FBgn0030925.3;Parent=FBgn0030925.3.mrna1;Target=FBgn0030925.3 449 741 +
Chr1	stalkie_big_nohaplotig	exon	145808057	145808240	97	+	.	ID=FBgn0030925.3.mrna1.exon5;Name=FBgn0030925.3;Parent=FBgn0030925.3.mrna1;Target=FBgn0030925.3 742 925 +
Chr1	stalkie_big_nohaplotig	exon	145808298	145808635	99	+	.	ID=FBgn0030925.3.mrna1.exon6;Name=FBgn0030925.3;Parent=FBgn0030925.3.mrna1;Target=FBgn0030925.3 926 1263 +
Chr1	stalkie_big_nohaplotig	CDS	145806603	145806675	95	+	0	ID=FBgn0030925.3.mrna1.cds1;Name=FBgn0030925.3;Parent=FBgn0030925.3.mrna1;Target=FBgn0030925.3 124 196 +
Chr1	stalkie_big_nohaplotig	CDS	145807133	145807319	98	+	1	ID=FBgn0030925.3.mrna1.cds2;Name=FBgn0030925.3;Parent=FBgn0030925.3.mrna1;Target=FBgn0030925.3 197 383 +
Chr1	stalkie_big_nohaplotig	CDS	145807431	145807495	100	+	2	ID=FBgn0030925.3.mrna1.cds3;Name=FBgn0030925.3;Parent=FBgn0030925.3.mrna1;Target=FBgn0030925.3 384 448 +
Chr1	stalkie_big_nohaplotig	CDS	145807689	145807981	98	+	1	ID=FBgn0030925.3.mrna1.cds4;Name=FBgn0030925.3;Parent=FBgn0030925.3.mrna1;Target=FBgn0030925.3 449 741 +
Chr1	stalkie_big_nohaplotig	CDS	145808057	145808240	97	+	0	ID=FBgn0030925.3.mrna1.cds5;Name=FBgn0030925.3;Parent=FBgn0030925.3.mrna1;Target=FBgn0030925.3 742 925 +
Chr1	stalkie_big_nohaplotig	CDS	145808298	145808635	99	+	1	ID=FBgn0030925.3.mrna1.cds6;Name=FBgn0030925.3;Parent=FBgn0030925.3.mrna1;Target=FBgn0030925.3 926 1263 +
Chr2	stalkie_big_nohaplotig	mRNA	41246420	41250909	.	-	.	ID=FBgn0003731.1.mrna1;Name=FBgn0003731.1;Parent=FBgn0003731.1.path1;Dir=sensecoverage=77.5;identity=99.4;matches=3160;mismatches=19;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	41250687	41250909	100	-	.	ID=FBgn0003731.1.mrna1.exon1;Name=FBgn0003731.1;Parent=FBgn0003731.1.mrna1;Target=FBgn0003731.1 134 356 +
Chr2	stalkie_big_nohaplotig	exon	41250426	41250622	98	-	.	ID=FBgn0003731.1.mrna1.exon2;Name=FBgn0003731.1;Parent=FBgn0003731.1.mrna1;Target=FBgn0003731.1 357 553 +
Chr2	stalkie_big_nohaplotig	exon	41249380	41250360	99	-	.	ID=FBgn0003731.1.mrna1.exon3;Name=FBgn0003731.1;Parent=FBgn0003731.1.mrna1;Target=FBgn0003731.1 554 1534 +
Chr2	stalkie_big_nohaplotig	exon	41249181	41249313	100	-	.	ID=FBgn0003731.1.mrna1.exon4;Name=FBgn0003731.1;Parent=FBgn0003731.1.mrna1;Target=FBgn0003731.1 1535 1667 +
Chr2	stalkie_big_nohaplotig	exon	41246420	41248064	99	-	.	ID=FBgn0003731.1.mrna1.exon5;Name=FBgn0003731.1;Parent=FBgn0003731.1.mrna1;Target=FBgn0003731.1 1668 3312 +
Chr2	stalkie_big_nohaplotig	CDS	41250687	41250907	100	-	0	ID=FBgn0003731.1.mrna1.cds1;Name=FBgn0003731.1;Parent=FBgn0003731.1.mrna1;Target=FBgn0003731.1 136 356 +
Chr2	stalkie_big_nohaplotig	CDS	41250426	41250622	98	-	2	ID=FBgn0003731.1.mrna1.cds2;Name=FBgn0003731.1;Parent=FBgn0003731.1.mrna1;Target=FBgn0003731.1 357 553 +
Chr2	stalkie_big_nohaplotig	CDS	41249380	41250360	99	-	1	ID=FBgn0003731.1.mrna1.cds3;Name=FBgn0003731.1;Parent=FBgn0003731.1.mrna1;Target=FBgn0003731.1 554 1534 +
Chr2	stalkie_big_nohaplotig	CDS	41249181	41249313	100	-	1	ID=FBgn0003731.1.mrna1.cds4;Name=FBgn0003731.1;Parent=FBgn0003731.1.mrna1;Target=FBgn0003731.1 1535 1667 +
Chr2	stalkie_big_nohaplotig	CDS	41246420	41248064	99	-	2	ID=FBgn0003731.1.mrna1.cds5;Name=FBgn0003731.1;Parent=FBgn0003731.1.mrna1;Target=FBgn0003731.1 1668 3312 +
Chr1	stalkie_big_nohaplotig	mRNA	117829758	117836031	.	-	.	ID=FBgn0041203.1.mrna1;Name=FBgn0041203.1;Parent=FBgn0041203.1.path1;Dir=sensecoverage=100.0;identity=99.2;matches=3949;mismatches=32;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	117836001	117836031	100	-	.	ID=FBgn0041203.1.mrna1.exon1;Name=FBgn0041203.1;Parent=FBgn0041203.1.mrna1;Target=FBgn0041203.1 1 31 +
Chr1	stalkie_big_nohaplotig	exon	117834828	117835509	99	-	.	ID=FBgn0041203.1.mrna1.exon2;Name=FBgn0041203.1;Parent=FBgn0041203.1.mrna1;Target=FBgn0041203.1 32 713 +
Chr1	stalkie_big_nohaplotig	exon	117834247	117834333	100	-	.	ID=FBgn0041203.1.mrna1.exon3;Name=FBgn0041203.1;Parent=FBgn0041203.1.mrna1;Target=FBgn0041203.1 714 800 +
Chr1	stalkie_big_nohaplotig	exon	117832947	117834162	98	-	.	ID=FBgn0041203.1.mrna1.exon4;Name=FBgn0041203.1;Parent=FBgn0041203.1.mrna1;Target=FBgn0041203.1 801 2016 +
Chr1	stalkie_big_nohaplotig	exon	117831698	117831852	100	-	.	ID=FBgn0041203.1.mrna1.exon5;Name=FBgn0041203.1;Parent=FBgn0041203.1.mrna1;Target=FBgn0041203.1 2017 2171 +
Chr1	stalkie_big_nohaplotig	exon	117830118	117831631	99	-	.	ID=FBgn0041203.1.mrna1.exon6;Name=FBgn0041203.1;Parent=FBgn0041203.1.mrna1;Target=FBgn0041203.1 2172 3685 +
Chr1	stalkie_big_nohaplotig	exon	117829758	117830053	99	-	.	ID=FBgn0041203.1.mrna1.exon7;Name=FBgn0041203.1;Parent=FBgn0041203.1.mrna1;Target=FBgn0041203.1 3686 3981 +
Chr1	stalkie_big_nohaplotig	CDS	117836001	117836031	100	-	0	ID=FBgn0041203.1.mrna1.cds1;Name=FBgn0041203.1;Parent=FBgn0041203.1.mrna1;Target=FBgn0041203.1 1 31 +
Chr1	stalkie_big_nohaplotig	CDS	117834828	117835509	99	-	1	ID=FBgn0041203.1.mrna1.cds2;Name=FBgn0041203.1;Parent=FBgn0041203.1.mrna1;Target=FBgn0041203.1 32 713 +
Chr1	stalkie_big_nohaplotig	CDS	117834247	117834333	100	-	2	ID=FBgn0041203.1.mrna1.cds3;Name=FBgn0041203.1;Parent=FBgn0041203.1.mrna1;Target=FBgn0041203.1 714 800 +
Chr1	stalkie_big_nohaplotig	CDS	117832947	117834162	98	-	2	ID=FBgn0041203.1.mrna1.cds4;Name=FBgn0041203.1;Parent=FBgn0041203.1.mrna1;Target=FBgn0041203.1 801 2016 +
Chr1	stalkie_big_nohaplotig	CDS	117831698	117831852	100	-	0	ID=FBgn0041203.1.mrna1.cds5;Name=FBgn0041203.1;Parent=FBgn0041203.1.mrna1;Target=FBgn0041203.1 2017 2171 +
Chr1	stalkie_big_nohaplotig	CDS	117830118	117831631	99	-	2	ID=FBgn0041203.1.mrna1.cds6;Name=FBgn0041203.1;Parent=FBgn0041203.1.mrna1;Target=FBgn0041203.1 2172 3685 +
Chr1	stalkie_big_nohaplotig	CDS	117829758	117830053	99	-	1	ID=FBgn0041203.1.mrna1.cds7;Name=FBgn0041203.1;Parent=FBgn0041203.1.mrna1;Target=FBgn0041203.1 3686 3981 +
Chr1	stalkie_big_nohaplotig	mRNA	117846602	117864538	.	-	.	ID=FBgn0030400.1.mrna1;Name=FBgn0030400.1;Parent=FBgn0030400.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1618;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	117863749	117864538	99	-	.	ID=FBgn0030400.1.mrna1.exon1;Name=FBgn0030400.1;Parent=FBgn0030400.1.mrna1;Target=FBgn0030400.1 1 790 +
Chr1	stalkie_big_nohaplotig	exon	117847333	117847617	100	-	.	ID=FBgn0030400.1.mrna1.exon2;Name=FBgn0030400.1;Parent=FBgn0030400.1.mrna1;Target=FBgn0030400.1 791 1075 +
Chr1	stalkie_big_nohaplotig	exon	117846808	117847217	100	-	.	ID=FBgn0030400.1.mrna1.exon3;Name=FBgn0030400.1;Parent=FBgn0030400.1.mrna1;Target=FBgn0030400.1 1076 1485 +
Chr1	stalkie_big_nohaplotig	exon	117846602	117846739	100	-	.	ID=FBgn0030400.1.mrna1.exon4;Name=FBgn0030400.1;Parent=FBgn0030400.1.mrna1;Target=FBgn0030400.1 1486 1623 +
Chr1	stalkie_big_nohaplotig	CDS	117863749	117864538	99	-	0	ID=FBgn0030400.1.mrna1.cds1;Name=FBgn0030400.1;Parent=FBgn0030400.1.mrna1;Target=FBgn0030400.1 1 790 +
Chr1	stalkie_big_nohaplotig	CDS	117847333	117847617	100	-	1	ID=FBgn0030400.1.mrna1.cds2;Name=FBgn0030400.1;Parent=FBgn0030400.1.mrna1;Target=FBgn0030400.1 791 1075 +
Chr1	stalkie_big_nohaplotig	CDS	117846808	117847217	100	-	1	ID=FBgn0030400.1.mrna1.cds3;Name=FBgn0030400.1;Parent=FBgn0030400.1.mrna1;Target=FBgn0030400.1 1076 1485 +
Chr1	stalkie_big_nohaplotig	CDS	117846602	117846739	100	-	0	ID=FBgn0030400.1.mrna1.cds4;Name=FBgn0030400.1;Parent=FBgn0030400.1.mrna1;Target=FBgn0030400.1 1486 1623 +
Chr2	stalkie_big_nohaplotig	mRNA	154215495	154215892	.	-	.	ID=FBgn0004876.1.mrna1;Name=FBgn0004876.1;Parent=FBgn0004876.1.path1;Dir=indeterminatecoverage=15.5;identity=99.7;matches=397;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	154215495	154215892	99	-	.	ID=FBgn0004876.1.mrna1.exon1;Name=FBgn0004876.1;Parent=FBgn0004876.1.mrna1;Target=FBgn0004876.1 398 1 .
Chr2	stalkie_big_nohaplotig	mRNA	154158056	154159632	.	-	.	ID=FBgn0005649.1.mrna1;Name=FBgn0005649.1;Parent=FBgn0005649.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1367;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	154159381	154159632	99	-	.	ID=FBgn0005649.1.mrna1.exon1;Name=FBgn0005649.1;Parent=FBgn0005649.1.mrna1;Target=FBgn0005649.1 1 252 +
Chr2	stalkie_big_nohaplotig	exon	154158462	154159313	100	-	.	ID=FBgn0005649.1.mrna1.exon2;Name=FBgn0005649.1;Parent=FBgn0005649.1.mrna1;Target=FBgn0005649.1 253 1104 +
Chr2	stalkie_big_nohaplotig	exon	154158288	154158381	100	-	.	ID=FBgn0005649.1.mrna1.exon3;Name=FBgn0005649.1;Parent=FBgn0005649.1.mrna1;Target=FBgn0005649.1 1105 1198 +
Chr2	stalkie_big_nohaplotig	exon	154158056	154158225	100	-	.	ID=FBgn0005649.1.mrna1.exon4;Name=FBgn0005649.1;Parent=FBgn0005649.1.mrna1;Target=FBgn0005649.1 1199 1368 +
Chr2	stalkie_big_nohaplotig	CDS	154159381	154159632	99	-	0	ID=FBgn0005649.1.mrna1.cds1;Name=FBgn0005649.1;Parent=FBgn0005649.1.mrna1;Target=FBgn0005649.1 1 252 +
Chr2	stalkie_big_nohaplotig	CDS	154158462	154159313	100	-	0	ID=FBgn0005649.1.mrna1.cds2;Name=FBgn0005649.1;Parent=FBgn0005649.1.mrna1;Target=FBgn0005649.1 253 1104 +
Chr2	stalkie_big_nohaplotig	CDS	154158288	154158381	100	-	0	ID=FBgn0005649.1.mrna1.cds3;Name=FBgn0005649.1;Parent=FBgn0005649.1.mrna1;Target=FBgn0005649.1 1105 1198 +
Chr2	stalkie_big_nohaplotig	CDS	154158056	154158225	100	-	1	ID=FBgn0005649.1.mrna1.cds4;Name=FBgn0005649.1;Parent=FBgn0005649.1.mrna1;Target=FBgn0005649.1 1199 1368 +
ChrX	stalkie_big_nohaplotig	mRNA	68092351	68097743	.	+	.	ID=FBgn0031478.1.mrna1;Name=FBgn0031478.1;Parent=FBgn0031478.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1114;mismatches=2;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	68092351	68092410	100	+	.	ID=FBgn0031478.1.mrna1.exon1;Name=FBgn0031478.1;Parent=FBgn0031478.1.mrna1;Target=FBgn0031478.1 1 60 +
ChrX	stalkie_big_nohaplotig	exon	68096627	68097121	99	+	.	ID=FBgn0031478.1.mrna1.exon2;Name=FBgn0031478.1;Parent=FBgn0031478.1.mrna1;Target=FBgn0031478.1 61 555 +
ChrX	stalkie_big_nohaplotig	exon	68097183	68097743	100	+	.	ID=FBgn0031478.1.mrna1.exon3;Name=FBgn0031478.1;Parent=FBgn0031478.1.mrna1;Target=FBgn0031478.1 556 1116 +
ChrX	stalkie_big_nohaplotig	CDS	68092351	68092410	100	+	0	ID=FBgn0031478.1.mrna1.cds1;Name=FBgn0031478.1;Parent=FBgn0031478.1.mrna1;Target=FBgn0031478.1 1 60 +
ChrX	stalkie_big_nohaplotig	CDS	68096627	68097121	99	+	0	ID=FBgn0031478.1.mrna1.cds2;Name=FBgn0031478.1;Parent=FBgn0031478.1.mrna1;Target=FBgn0031478.1 61 555 +
ChrX	stalkie_big_nohaplotig	CDS	68097183	68097743	100	+	0	ID=FBgn0031478.1.mrna1.cds3;Name=FBgn0031478.1;Parent=FBgn0031478.1.mrna1;Target=FBgn0031478.1 556 1116 +
ChrX	stalkie_big_nohaplotig	mRNA	68039169	68040199	.	-	.	ID=ORF1879.mrna1;Name=ORF1879;Parent=ORF1879.path1;Dir=sensecoverage=100.0;identity=99.8;matches=970;mismatches=2;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	68039352	68040199	99	-	.	ID=ORF1879.mrna1.exon1;Name=ORF1879;Parent=ORF1879.mrna1;Target=ORF1879 1 848 +
ChrX	stalkie_big_nohaplotig	exon	68039169	68039292	99	-	.	ID=ORF1879.mrna1.exon2;Name=ORF1879;Parent=ORF1879.mrna1;Target=ORF1879 849 972 +
ChrX	stalkie_big_nohaplotig	CDS	68039352	68040199	99	-	0	ID=ORF1879.mrna1.cds1;Name=ORF1879;Parent=ORF1879.mrna1;Target=ORF1879 1 848 +
ChrX	stalkie_big_nohaplotig	CDS	68039169	68039292	99	-	2	ID=ORF1879.mrna1.cds2;Name=ORF1879;Parent=ORF1879.mrna1;Target=ORF1879 849 972 +
Chr2	stalkie_big_nohaplotig	mRNA	84621108	84641902	.	+	.	ID=FBgn0001112.1.mrna1;Name=FBgn0001112.1;Parent=FBgn0001112.1.path1;Dir=sensecoverage=100.0;identity=98.7;matches=1857;mismatches=24;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	84621108	84621320	99	+	.	ID=FBgn0001112.1.mrna1.exon1;Name=FBgn0001112.1;Parent=FBgn0001112.1.mrna1;Target=FBgn0001112.1 1 213 +
Chr2	stalkie_big_nohaplotig	exon	84621421	84621541	100	+	.	ID=FBgn0001112.1.mrna1.exon2;Name=FBgn0001112.1;Parent=FBgn0001112.1.mrna1;Target=FBgn0001112.1 214 334 +
Chr2	stalkie_big_nohaplotig	exon	84639702	84640106	99	+	.	ID=FBgn0001112.1.mrna1.exon3;Name=FBgn0001112.1;Parent=FBgn0001112.1.mrna1;Target=FBgn0001112.1 335 739 +
Chr2	stalkie_big_nohaplotig	exon	84640692	84641023	99	+	.	ID=FBgn0001112.1.mrna1.exon4;Name=FBgn0001112.1;Parent=FBgn0001112.1.mrna1;Target=FBgn0001112.1 740 1071 +
Chr2	stalkie_big_nohaplotig	exon	84641093	84641902	97	+	.	ID=FBgn0001112.1.mrna1.exon5;Name=FBgn0001112.1;Parent=FBgn0001112.1.mrna1;Target=FBgn0001112.1 1072 1881 +
Chr2	stalkie_big_nohaplotig	CDS	84621108	84621320	99	+	0	ID=FBgn0001112.1.mrna1.cds1;Name=FBgn0001112.1;Parent=FBgn0001112.1.mrna1;Target=FBgn0001112.1 1 213 +
Chr2	stalkie_big_nohaplotig	CDS	84621421	84621541	100	+	0	ID=FBgn0001112.1.mrna1.cds2;Name=FBgn0001112.1;Parent=FBgn0001112.1.mrna1;Target=FBgn0001112.1 214 334 +
Chr2	stalkie_big_nohaplotig	CDS	84639702	84640106	99	+	1	ID=FBgn0001112.1.mrna1.cds3;Name=FBgn0001112.1;Parent=FBgn0001112.1.mrna1;Target=FBgn0001112.1 335 739 +
Chr2	stalkie_big_nohaplotig	CDS	84640692	84641023	99	+	1	ID=FBgn0001112.1.mrna1.cds4;Name=FBgn0001112.1;Parent=FBgn0001112.1.mrna1;Target=FBgn0001112.1 740 1071 +
Chr2	stalkie_big_nohaplotig	CDS	84641093	84641902	97	+	0	ID=FBgn0001112.1.mrna1.cds5;Name=FBgn0001112.1;Parent=FBgn0001112.1.mrna1;Target=FBgn0001112.1 1072 1881 +
Chr2	stalkie_big_nohaplotig	mRNA	38216304	38217372	.	+	.	ID=FBgn0034923.1.mrna1;Name=FBgn0034923.1;Parent=FBgn0034923.1.path1;Dir=sensecoverage=99.6;identity=99.6;matches=1006;mismatches=4;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	38216304	38216393	98	+	.	ID=FBgn0034923.1.mrna1.exon1;Name=FBgn0034923.1;Parent=FBgn0034923.1.mrna1;Target=FBgn0034923.1 1 90 +
Chr2	stalkie_big_nohaplotig	exon	38216453	38217372	99	+	.	ID=FBgn0034923.1.mrna1.exon2;Name=FBgn0034923.1;Parent=FBgn0034923.1.mrna1;Target=FBgn0034923.1 91 1010 +
Chr2	stalkie_big_nohaplotig	CDS	38216304	38216393	98	+	0	ID=FBgn0034923.1.mrna1.cds1;Name=FBgn0034923.1;Parent=FBgn0034923.1.mrna1;Target=FBgn0034923.1 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	38216453	38217370	99	+	0	ID=FBgn0034923.1.mrna1.cds2;Name=FBgn0034923.1;Parent=FBgn0034923.1.mrna1;Target=FBgn0034923.1 91 1008 +
Chr2	stalkie_big_nohaplotig	mRNA	134238813	134283882	.	+	.	ID=FBgn0027598.1.mrna1;Name=FBgn0027598.1;Parent=FBgn0027598.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2866;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	134238813	134238969	99	+	.	ID=FBgn0027598.1.mrna1.exon1;Name=FBgn0027598.1;Parent=FBgn0027598.1.mrna1;Target=FBgn0027598.1 1 157 +
Chr2	stalkie_big_nohaplotig	exon	134264825	134265026	100	+	.	ID=FBgn0027598.1.mrna1.exon2;Name=FBgn0027598.1;Parent=FBgn0027598.1.mrna1;Target=FBgn0027598.1 158 359 +
Chr2	stalkie_big_nohaplotig	exon	134267951	134268062	100	+	.	ID=FBgn0027598.1.mrna1.exon3;Name=FBgn0027598.1;Parent=FBgn0027598.1.mrna1;Target=FBgn0027598.1 360 471 +
Chr2	stalkie_big_nohaplotig	exon	134268235	134268757	99	+	.	ID=FBgn0027598.1.mrna1.exon4;Name=FBgn0027598.1;Parent=FBgn0027598.1.mrna1;Target=FBgn0027598.1 472 994 +
Chr2	stalkie_big_nohaplotig	exon	134281930	134282496	100	+	.	ID=FBgn0027598.1.mrna1.exon5;Name=FBgn0027598.1;Parent=FBgn0027598.1.mrna1;Target=FBgn0027598.1 995 1561 +
Chr2	stalkie_big_nohaplotig	exon	134282573	134283882	99	+	.	ID=FBgn0027598.1.mrna1.exon6;Name=FBgn0027598.1;Parent=FBgn0027598.1.mrna1;Target=FBgn0027598.1 1562 2871 +
Chr2	stalkie_big_nohaplotig	CDS	134238813	134238969	99	+	0	ID=FBgn0027598.1.mrna1.cds1;Name=FBgn0027598.1;Parent=FBgn0027598.1.mrna1;Target=FBgn0027598.1 1 157 +
Chr2	stalkie_big_nohaplotig	CDS	134264825	134265026	100	+	1	ID=FBgn0027598.1.mrna1.cds2;Name=FBgn0027598.1;Parent=FBgn0027598.1.mrna1;Target=FBgn0027598.1 158 359 +
Chr2	stalkie_big_nohaplotig	CDS	134267951	134268062	100	+	2	ID=FBgn0027598.1.mrna1.cds3;Name=FBgn0027598.1;Parent=FBgn0027598.1.mrna1;Target=FBgn0027598.1 360 471 +
Chr2	stalkie_big_nohaplotig	CDS	134268235	134268757	99	+	0	ID=FBgn0027598.1.mrna1.cds4;Name=FBgn0027598.1;Parent=FBgn0027598.1.mrna1;Target=FBgn0027598.1 472 994 +
Chr2	stalkie_big_nohaplotig	CDS	134281930	134282496	100	+	1	ID=FBgn0027598.1.mrna1.cds5;Name=FBgn0027598.1;Parent=FBgn0027598.1.mrna1;Target=FBgn0027598.1 995 1561 +
Chr2	stalkie_big_nohaplotig	CDS	134282573	134283882	99	+	1	ID=FBgn0027598.1.mrna1.cds6;Name=FBgn0027598.1;Parent=FBgn0027598.1.mrna1;Target=FBgn0027598.1 1562 2871 +
Chr2	stalkie_big_nohaplotig	mRNA	134175892	134188473	.	-	.	ID=FBgn0039467.1.mrna1;Name=FBgn0039467.1;Parent=FBgn0039467.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1242;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	134188365	134188473	100	-	.	ID=FBgn0039467.1.mrna1.exon1;Name=FBgn0039467.1;Parent=FBgn0039467.1.mrna1;Target=FBgn0039467.1 1 109 +
Chr2	stalkie_big_nohaplotig	exon	134178543	134178836	100	-	.	ID=FBgn0039467.1.mrna1.exon2;Name=FBgn0039467.1;Parent=FBgn0039467.1.mrna1;Target=FBgn0039467.1 110 403 +
Chr2	stalkie_big_nohaplotig	exon	134178311	134178481	98	-	.	ID=FBgn0039467.1.mrna1.exon3;Name=FBgn0039467.1;Parent=FBgn0039467.1.mrna1;Target=FBgn0039467.1 404 574 +
Chr2	stalkie_big_nohaplotig	exon	134178091	134178232	100	-	.	ID=FBgn0039467.1.mrna1.exon4;Name=FBgn0039467.1;Parent=FBgn0039467.1.mrna1;Target=FBgn0039467.1 575 716 +
Chr2	stalkie_big_nohaplotig	exon	134176338	134176493	100	-	.	ID=FBgn0039467.1.mrna1.exon5;Name=FBgn0039467.1;Parent=FBgn0039467.1.mrna1;Target=FBgn0039467.1 717 872 +
Chr2	stalkie_big_nohaplotig	exon	134175892	134176264	100	-	.	ID=FBgn0039467.1.mrna1.exon6;Name=FBgn0039467.1;Parent=FBgn0039467.1.mrna1;Target=FBgn0039467.1 873 1245 +
Chr2	stalkie_big_nohaplotig	CDS	134188365	134188473	100	-	0	ID=FBgn0039467.1.mrna1.cds1;Name=FBgn0039467.1;Parent=FBgn0039467.1.mrna1;Target=FBgn0039467.1 1 109 +
Chr2	stalkie_big_nohaplotig	CDS	134178543	134178836	100	-	1	ID=FBgn0039467.1.mrna1.cds2;Name=FBgn0039467.1;Parent=FBgn0039467.1.mrna1;Target=FBgn0039467.1 110 403 +
Chr2	stalkie_big_nohaplotig	CDS	134178311	134178481	98	-	1	ID=FBgn0039467.1.mrna1.cds3;Name=FBgn0039467.1;Parent=FBgn0039467.1.mrna1;Target=FBgn0039467.1 404 574 +
Chr2	stalkie_big_nohaplotig	CDS	134178091	134178232	100	-	1	ID=FBgn0039467.1.mrna1.cds4;Name=FBgn0039467.1;Parent=FBgn0039467.1.mrna1;Target=FBgn0039467.1 575 716 +
Chr2	stalkie_big_nohaplotig	CDS	134176338	134176493	100	-	2	ID=FBgn0039467.1.mrna1.cds5;Name=FBgn0039467.1;Parent=FBgn0039467.1.mrna1;Target=FBgn0039467.1 717 872 +
Chr2	stalkie_big_nohaplotig	CDS	134175892	134176264	100	-	2	ID=FBgn0039467.1.mrna1.cds6;Name=FBgn0039467.1;Parent=FBgn0039467.1.mrna1;Target=FBgn0039467.1 873 1245 +
Chr2	stalkie_big_nohaplotig	mRNA	10247085	10254099	.	+	.	ID=FBgn0033889.2.mrna1;Name=FBgn0033889.2;Parent=FBgn0033889.2.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2891;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	10247085	10247232	100	+	.	ID=FBgn0033889.2.mrna1.exon1;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 1 148 +
Chr2	stalkie_big_nohaplotig	exon	10247296	10247426	100	+	.	ID=FBgn0033889.2.mrna1.exon2;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 149 279 +
Chr2	stalkie_big_nohaplotig	exon	10247828	10247948	99	+	.	ID=FBgn0033889.2.mrna1.exon3;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 280 400 +
Chr2	stalkie_big_nohaplotig	exon	10248035	10248161	100	+	.	ID=FBgn0033889.2.mrna1.exon4;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 401 527 +
Chr2	stalkie_big_nohaplotig	exon	10249399	10249693	99	+	.	ID=FBgn0033889.2.mrna1.exon5;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 528 822 +
Chr2	stalkie_big_nohaplotig	exon	10249755	10249780	100	+	.	ID=FBgn0033889.2.mrna1.exon6;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 823 848 +
Chr2	stalkie_big_nohaplotig	exon	10249873	10250191	100	+	.	ID=FBgn0033889.2.mrna1.exon7;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 849 1167 +
Chr2	stalkie_big_nohaplotig	exon	10251637	10251995	100	+	.	ID=FBgn0033889.2.mrna1.exon8;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 1168 1526 +
Chr2	stalkie_big_nohaplotig	exon	10252060	10252172	100	+	.	ID=FBgn0033889.2.mrna1.exon9;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 1527 1639 +
Chr2	stalkie_big_nohaplotig	exon	10252228	10252941	99	+	.	ID=FBgn0033889.2.mrna1.exon10;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 1640 2353 +
Chr2	stalkie_big_nohaplotig	exon	10253009	10253101	100	+	.	ID=FBgn0033889.2.mrna1.exon11;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 2354 2446 +
Chr2	stalkie_big_nohaplotig	exon	10253594	10253872	100	+	.	ID=FBgn0033889.2.mrna1.exon12;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 2458 2736 +
Chr2	stalkie_big_nohaplotig	exon	10253929	10254099	99	+	.	ID=FBgn0033889.2.mrna1.exon13;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 2737 2907 +
Chr2	stalkie_big_nohaplotig	CDS	10247085	10247232	100	+	0	ID=FBgn0033889.2.mrna1.cds1;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 1 148 +
Chr2	stalkie_big_nohaplotig	CDS	10247296	10247426	100	+	1	ID=FBgn0033889.2.mrna1.cds2;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 149 279 +
Chr2	stalkie_big_nohaplotig	CDS	10247828	10247948	99	+	0	ID=FBgn0033889.2.mrna1.cds3;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 280 400 +
Chr2	stalkie_big_nohaplotig	CDS	10248035	10248161	100	+	1	ID=FBgn0033889.2.mrna1.cds4;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 401 527 +
Chr2	stalkie_big_nohaplotig	CDS	10249399	10249693	99	+	2	ID=FBgn0033889.2.mrna1.cds5;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 528 822 +
Chr2	stalkie_big_nohaplotig	CDS	10249755	10249780	100	+	0	ID=FBgn0033889.2.mrna1.cds6;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 823 848 +
Chr2	stalkie_big_nohaplotig	CDS	10249873	10250191	100	+	2	ID=FBgn0033889.2.mrna1.cds7;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 849 1167 +
Chr2	stalkie_big_nohaplotig	CDS	10251637	10251995	100	+	0	ID=FBgn0033889.2.mrna1.cds8;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 1168 1526 +
Chr2	stalkie_big_nohaplotig	CDS	10252060	10252172	100	+	2	ID=FBgn0033889.2.mrna1.cds9;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 1527 1639 +
Chr2	stalkie_big_nohaplotig	CDS	10252228	10252941	99	+	1	ID=FBgn0033889.2.mrna1.cds10;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 1640 2353 +
Chr2	stalkie_big_nohaplotig	CDS	10253009	10253101	100	+	1	ID=FBgn0033889.2.mrna1.cds11;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 2354 2446 +
Chr2	stalkie_big_nohaplotig	CDS	10253594	10253872	100	+	0	ID=FBgn0033889.2.mrna1.cds12;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 2458 2736 +
Chr2	stalkie_big_nohaplotig	CDS	10253929	10254099	99	+	0	ID=FBgn0033889.2.mrna1.cds13;Name=FBgn0033889.2;Parent=FBgn0033889.2.mrna1;Target=FBgn0033889.2 2737 2907 +
Chr2	stalkie_big_nohaplotig	mRNA	62821559	62823337	.	-	.	ID=FBgn0033581.1.mrna1;Name=FBgn0033581.1;Parent=FBgn0033581.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1530;mismatches=6;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	62823212	62823337	100	-	.	ID=FBgn0033581.1.mrna1.exon1;Name=FBgn0033581.1;Parent=FBgn0033581.1.mrna1;Target=FBgn0033581.1 1 126 +
Chr2	stalkie_big_nohaplotig	exon	62821559	62822968	99	-	.	ID=FBgn0033581.1.mrna1.exon2;Name=FBgn0033581.1;Parent=FBgn0033581.1.mrna1;Target=FBgn0033581.1 127 1536 +
Chr2	stalkie_big_nohaplotig	CDS	62823212	62823337	100	-	0	ID=FBgn0033581.1.mrna1.cds1;Name=FBgn0033581.1;Parent=FBgn0033581.1.mrna1;Target=FBgn0033581.1 1 126 +
Chr2	stalkie_big_nohaplotig	CDS	62821559	62822968	99	-	0	ID=FBgn0033581.1.mrna1.cds2;Name=FBgn0033581.1;Parent=FBgn0033581.1.mrna1;Target=FBgn0033581.1 127 1536 +
Chr2	stalkie_big_nohaplotig	mRNA	162857130	162860719	.	-	.	ID=FBgn0039381.1.mrna1;Name=FBgn0039381.1;Parent=FBgn0039381.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1242;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	162860434	162860719	100	-	.	ID=FBgn0039381.1.mrna1.exon1;Name=FBgn0039381.1;Parent=FBgn0039381.1.mrna1;Target=FBgn0039381.1 1 286 +
Chr2	stalkie_big_nohaplotig	exon	162860241	162860363	100	-	.	ID=FBgn0039381.1.mrna1.exon2;Name=FBgn0039381.1;Parent=FBgn0039381.1.mrna1;Target=FBgn0039381.1 287 409 +
Chr2	stalkie_big_nohaplotig	exon	162859930	162860121	100	-	.	ID=FBgn0039381.1.mrna1.exon3;Name=FBgn0039381.1;Parent=FBgn0039381.1.mrna1;Target=FBgn0039381.1 410 601 +
Chr2	stalkie_big_nohaplotig	exon	162859401	162859854	100	-	.	ID=FBgn0039381.1.mrna1.exon4;Name=FBgn0039381.1;Parent=FBgn0039381.1.mrna1;Target=FBgn0039381.1 602 1055 +
Chr2	stalkie_big_nohaplotig	exon	162857261	162857381	100	-	.	ID=FBgn0039381.1.mrna1.exon5;Name=FBgn0039381.1;Parent=FBgn0039381.1.mrna1;Target=FBgn0039381.1 1056 1176 +
Chr2	stalkie_big_nohaplotig	exon	162857130	162857195	100	-	.	ID=FBgn0039381.1.mrna1.exon6;Name=FBgn0039381.1;Parent=FBgn0039381.1.mrna1;Target=FBgn0039381.1 1177 1242 +
Chr2	stalkie_big_nohaplotig	CDS	162860434	162860719	100	-	0	ID=FBgn0039381.1.mrna1.cds1;Name=FBgn0039381.1;Parent=FBgn0039381.1.mrna1;Target=FBgn0039381.1 1 286 +
Chr2	stalkie_big_nohaplotig	CDS	162860241	162860363	100	-	1	ID=FBgn0039381.1.mrna1.cds2;Name=FBgn0039381.1;Parent=FBgn0039381.1.mrna1;Target=FBgn0039381.1 287 409 +
Chr2	stalkie_big_nohaplotig	CDS	162859930	162860121	100	-	1	ID=FBgn0039381.1.mrna1.cds3;Name=FBgn0039381.1;Parent=FBgn0039381.1.mrna1;Target=FBgn0039381.1 410 601 +
Chr2	stalkie_big_nohaplotig	CDS	162859401	162859854	100	-	1	ID=FBgn0039381.1.mrna1.cds4;Name=FBgn0039381.1;Parent=FBgn0039381.1.mrna1;Target=FBgn0039381.1 602 1055 +
Chr2	stalkie_big_nohaplotig	CDS	162857261	162857381	100	-	2	ID=FBgn0039381.1.mrna1.cds5;Name=FBgn0039381.1;Parent=FBgn0039381.1.mrna1;Target=FBgn0039381.1 1056 1176 +
Chr2	stalkie_big_nohaplotig	CDS	162857130	162857195	100	-	0	ID=FBgn0039381.1.mrna1.cds6;Name=FBgn0039381.1;Parent=FBgn0039381.1.mrna1;Target=FBgn0039381.1 1177 1242 +
Chr2	stalkie_big_nohaplotig	mRNA	162747883	162758451	.	+	.	ID=FBgn0087013.1.mrna2;Name=FBgn0087013.1;Parent=FBgn0087013.1.path2;Dir=sensecoverage=97.5;identity=100.0;matches=3240;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	162747883	162748032	100	+	.	ID=FBgn0087013.1.mrna2.exon1;Name=FBgn0087013.1;Parent=FBgn0087013.1.mrna2;Target=FBgn0087013.1 85 234 +
Chr2	stalkie_big_nohaplotig	exon	162753494	162754054	100	+	.	ID=FBgn0087013.1.mrna2.exon2;Name=FBgn0087013.1;Parent=FBgn0087013.1.mrna2;Target=FBgn0087013.1 235 795 +
Chr2	stalkie_big_nohaplotig	exon	162754111	162754644	100	+	.	ID=FBgn0087013.1.mrna2.exon3;Name=FBgn0087013.1;Parent=FBgn0087013.1.mrna2;Target=FBgn0087013.1 796 1329 +
Chr2	stalkie_big_nohaplotig	exon	162754727	162755357	100	+	.	ID=FBgn0087013.1.mrna2.exon4;Name=FBgn0087013.1;Parent=FBgn0087013.1.mrna2;Target=FBgn0087013.1 1330 1960 +
Chr2	stalkie_big_nohaplotig	exon	162755436	162756155	100	+	.	ID=FBgn0087013.1.mrna2.exon5;Name=FBgn0087013.1;Parent=FBgn0087013.1.mrna2;Target=FBgn0087013.1 1961 2680 +
Chr2	stalkie_big_nohaplotig	exon	162756222	162756346	100	+	.	ID=FBgn0087013.1.mrna2.exon6;Name=FBgn0087013.1;Parent=FBgn0087013.1.mrna2;Target=FBgn0087013.1 2681 2805 +
Chr2	stalkie_big_nohaplotig	exon	162756432	162756619	100	+	.	ID=FBgn0087013.1.mrna2.exon7;Name=FBgn0087013.1;Parent=FBgn0087013.1.mrna2;Target=FBgn0087013.1 2806 2993 +
Chr2	stalkie_big_nohaplotig	exon	162758121	162758451	100	+	.	ID=FBgn0087013.1.mrna2.exon8;Name=FBgn0087013.1;Parent=FBgn0087013.1.mrna2;Target=FBgn0087013.1 2994 3324 +
Chr2	stalkie_big_nohaplotig	CDS	162747883	162748032	100	+	0	ID=FBgn0087013.1.mrna2.cds1;Name=FBgn0087013.1;Parent=FBgn0087013.1.mrna2;Target=FBgn0087013.1 85 234 +
Chr2	stalkie_big_nohaplotig	CDS	162753494	162754054	100	+	0	ID=FBgn0087013.1.mrna2.cds2;Name=FBgn0087013.1;Parent=FBgn0087013.1.mrna2;Target=FBgn0087013.1 235 795 +
Chr2	stalkie_big_nohaplotig	CDS	162754111	162754644	100	+	0	ID=FBgn0087013.1.mrna2.cds3;Name=FBgn0087013.1;Parent=FBgn0087013.1.mrna2;Target=FBgn0087013.1 796 1329 +
Chr2	stalkie_big_nohaplotig	CDS	162754727	162755357	100	+	0	ID=FBgn0087013.1.mrna2.cds4;Name=FBgn0087013.1;Parent=FBgn0087013.1.mrna2;Target=FBgn0087013.1 1330 1960 +
Chr2	stalkie_big_nohaplotig	CDS	162755436	162756155	100	+	1	ID=FBgn0087013.1.mrna2.cds5;Name=FBgn0087013.1;Parent=FBgn0087013.1.mrna2;Target=FBgn0087013.1 1961 2680 +
Chr2	stalkie_big_nohaplotig	CDS	162756222	162756346	100	+	1	ID=FBgn0087013.1.mrna2.cds6;Name=FBgn0087013.1;Parent=FBgn0087013.1.mrna2;Target=FBgn0087013.1 2681 2805 +
Chr2	stalkie_big_nohaplotig	CDS	162756432	162756619	100	+	0	ID=FBgn0087013.1.mrna2.cds7;Name=FBgn0087013.1;Parent=FBgn0087013.1.mrna2;Target=FBgn0087013.1 2806 2993 +
Chr2	stalkie_big_nohaplotig	CDS	162758121	162758451	100	+	2	ID=FBgn0087013.1.mrna2.cds8;Name=FBgn0087013.1;Parent=FBgn0087013.1.mrna2;Target=FBgn0087013.1 2994 3324 +
Chr2	stalkie_big_nohaplotig	mRNA	123615991	123616614	.	+	.	ID=FBgn0264291.1.mrna1;Name=FBgn0264291.1;Parent=FBgn0264291.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=435;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	123615991	123616116	100	+	.	ID=FBgn0264291.1.mrna1.exon1;Name=FBgn0264291.1;Parent=FBgn0264291.1.mrna1;Target=FBgn0264291.1 1 126 +
Chr2	stalkie_big_nohaplotig	exon	123616242	123616421	100	+	.	ID=FBgn0264291.1.mrna1.exon2;Name=FBgn0264291.1;Parent=FBgn0264291.1.mrna1;Target=FBgn0264291.1 127 306 +
Chr2	stalkie_big_nohaplotig	exon	123616486	123616614	100	+	.	ID=FBgn0264291.1.mrna1.exon3;Name=FBgn0264291.1;Parent=FBgn0264291.1.mrna1;Target=FBgn0264291.1 307 435 +
Chr2	stalkie_big_nohaplotig	CDS	123615991	123616116	100	+	0	ID=FBgn0264291.1.mrna1.cds1;Name=FBgn0264291.1;Parent=FBgn0264291.1.mrna1;Target=FBgn0264291.1 1 126 +
Chr2	stalkie_big_nohaplotig	CDS	123616242	123616421	100	+	0	ID=FBgn0264291.1.mrna1.cds2;Name=FBgn0264291.1;Parent=FBgn0264291.1.mrna1;Target=FBgn0264291.1 127 306 +
Chr2	stalkie_big_nohaplotig	CDS	123616486	123616614	100	+	0	ID=FBgn0264291.1.mrna1.cds3;Name=FBgn0264291.1;Parent=FBgn0264291.1.mrna1;Target=FBgn0264291.1 307 435 +
Chr2	stalkie_big_nohaplotig	mRNA	123603856	123610662	.	-	.	ID=FBgn0038488.1.mrna1;Name=FBgn0038488.1;Parent=FBgn0038488.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2118;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	123610418	123610662	100	-	.	ID=FBgn0038488.1.mrna1.exon1;Name=FBgn0038488.1;Parent=FBgn0038488.1.mrna1;Target=FBgn0038488.1 1 245 +
Chr2	stalkie_big_nohaplotig	exon	123608312	123608634	100	-	.	ID=FBgn0038488.1.mrna1.exon2;Name=FBgn0038488.1;Parent=FBgn0038488.1.mrna1;Target=FBgn0038488.1 246 568 +
Chr2	stalkie_big_nohaplotig	exon	123608069	123608249	100	-	.	ID=FBgn0038488.1.mrna1.exon3;Name=FBgn0038488.1;Parent=FBgn0038488.1.mrna1;Target=FBgn0038488.1 569 749 +
Chr2	stalkie_big_nohaplotig	exon	123606429	123606604	100	-	.	ID=FBgn0038488.1.mrna1.exon4;Name=FBgn0038488.1;Parent=FBgn0038488.1.mrna1;Target=FBgn0038488.1 750 925 +
Chr2	stalkie_big_nohaplotig	exon	123606270	123606365	100	-	.	ID=FBgn0038488.1.mrna1.exon5;Name=FBgn0038488.1;Parent=FBgn0038488.1.mrna1;Target=FBgn0038488.1 926 1021 +
Chr2	stalkie_big_nohaplotig	exon	123605448	123606196	100	-	.	ID=FBgn0038488.1.mrna1.exon6;Name=FBgn0038488.1;Parent=FBgn0038488.1.mrna1;Target=FBgn0038488.1 1022 1770 +
Chr2	stalkie_big_nohaplotig	exon	123605249	123605374	100	-	.	ID=FBgn0038488.1.mrna1.exon7;Name=FBgn0038488.1;Parent=FBgn0038488.1.mrna1;Target=FBgn0038488.1 1771 1896 +
Chr2	stalkie_big_nohaplotig	exon	123603856	123604077	100	-	.	ID=FBgn0038488.1.mrna1.exon8;Name=FBgn0038488.1;Parent=FBgn0038488.1.mrna1;Target=FBgn0038488.1 1897 2118 +
Chr2	stalkie_big_nohaplotig	CDS	123610418	123610662	100	-	0	ID=FBgn0038488.1.mrna1.cds1;Name=FBgn0038488.1;Parent=FBgn0038488.1.mrna1;Target=FBgn0038488.1 1 245 +
Chr2	stalkie_big_nohaplotig	CDS	123608312	123608634	100	-	2	ID=FBgn0038488.1.mrna1.cds2;Name=FBgn0038488.1;Parent=FBgn0038488.1.mrna1;Target=FBgn0038488.1 246 568 +
Chr2	stalkie_big_nohaplotig	CDS	123608069	123608249	100	-	1	ID=FBgn0038488.1.mrna1.cds3;Name=FBgn0038488.1;Parent=FBgn0038488.1.mrna1;Target=FBgn0038488.1 569 749 +
Chr2	stalkie_big_nohaplotig	CDS	123606429	123606604	100	-	2	ID=FBgn0038488.1.mrna1.cds4;Name=FBgn0038488.1;Parent=FBgn0038488.1.mrna1;Target=FBgn0038488.1 750 925 +
Chr2	stalkie_big_nohaplotig	CDS	123606270	123606365	100	-	1	ID=FBgn0038488.1.mrna1.cds5;Name=FBgn0038488.1;Parent=FBgn0038488.1.mrna1;Target=FBgn0038488.1 926 1021 +
Chr2	stalkie_big_nohaplotig	CDS	123605448	123606196	100	-	1	ID=FBgn0038488.1.mrna1.cds6;Name=FBgn0038488.1;Parent=FBgn0038488.1.mrna1;Target=FBgn0038488.1 1022 1770 +
Chr2	stalkie_big_nohaplotig	CDS	123605249	123605374	100	-	0	ID=FBgn0038488.1.mrna1.cds7;Name=FBgn0038488.1;Parent=FBgn0038488.1.mrna1;Target=FBgn0038488.1 1771 1896 +
Chr2	stalkie_big_nohaplotig	CDS	123603856	123604077	100	-	0	ID=FBgn0038488.1.mrna1.cds8;Name=FBgn0038488.1;Parent=FBgn0038488.1.mrna1;Target=FBgn0038488.1 1897 2118 +
Chr2	stalkie_big_nohaplotig	mRNA	7625039	7629741	.	-	.	ID=FBgn0033755.1.mrna1;Name=FBgn0033755.1;Parent=FBgn0033755.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=2566;mismatches=11;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	7629406	7629741	98	-	.	ID=FBgn0033755.1.mrna1.exon1;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 1 336 +
Chr2	stalkie_big_nohaplotig	exon	7629194	7629340	98	-	.	ID=FBgn0033755.1.mrna1.exon2;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 337 483 +
Chr2	stalkie_big_nohaplotig	exon	7628932	7629133	99	-	.	ID=FBgn0033755.1.mrna1.exon3;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 484 685 +
Chr2	stalkie_big_nohaplotig	exon	7628091	7628359	100	-	.	ID=FBgn0033755.1.mrna1.exon4;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 686 954 +
Chr2	stalkie_big_nohaplotig	exon	7627425	7628033	100	-	.	ID=FBgn0033755.1.mrna1.exon5;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 955 1563 +
Chr2	stalkie_big_nohaplotig	exon	7627259	7627352	100	-	.	ID=FBgn0033755.1.mrna1.exon6;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 1564 1657 +
Chr2	stalkie_big_nohaplotig	exon	7627032	7627201	100	-	.	ID=FBgn0033755.1.mrna1.exon7;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 1658 1827 +
Chr2	stalkie_big_nohaplotig	exon	7626789	7626971	100	-	.	ID=FBgn0033755.1.mrna1.exon8;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 1828 2010 +
Chr2	stalkie_big_nohaplotig	exon	7626514	7626720	99	-	.	ID=FBgn0033755.1.mrna1.exon9;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 2011 2217 +
Chr2	stalkie_big_nohaplotig	exon	7626295	7626450	100	-	.	ID=FBgn0033755.1.mrna1.exon10;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 2218 2373 +
Chr2	stalkie_big_nohaplotig	exon	7625361	7625444	98	-	.	ID=FBgn0033755.1.mrna1.exon11;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 2374 2457 +
Chr2	stalkie_big_nohaplotig	exon	7625039	7625158	100	-	.	ID=FBgn0033755.1.mrna1.exon12;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 2458 2577 +
Chr2	stalkie_big_nohaplotig	CDS	7629406	7629741	98	-	0	ID=FBgn0033755.1.mrna1.cds1;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 1 336 +
Chr2	stalkie_big_nohaplotig	CDS	7629194	7629340	98	-	0	ID=FBgn0033755.1.mrna1.cds2;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 337 483 +
Chr2	stalkie_big_nohaplotig	CDS	7628932	7629133	99	-	0	ID=FBgn0033755.1.mrna1.cds3;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 484 685 +
Chr2	stalkie_big_nohaplotig	CDS	7628091	7628359	100	-	1	ID=FBgn0033755.1.mrna1.cds4;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 686 954 +
Chr2	stalkie_big_nohaplotig	CDS	7627425	7628033	100	-	0	ID=FBgn0033755.1.mrna1.cds5;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 955 1563 +
Chr2	stalkie_big_nohaplotig	CDS	7627259	7627352	100	-	0	ID=FBgn0033755.1.mrna1.cds6;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 1564 1657 +
Chr2	stalkie_big_nohaplotig	CDS	7627032	7627201	100	-	1	ID=FBgn0033755.1.mrna1.cds7;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 1658 1827 +
Chr2	stalkie_big_nohaplotig	CDS	7626789	7626971	100	-	0	ID=FBgn0033755.1.mrna1.cds8;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 1828 2010 +
Chr2	stalkie_big_nohaplotig	CDS	7626514	7626720	99	-	0	ID=FBgn0033755.1.mrna1.cds9;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 2011 2217 +
Chr2	stalkie_big_nohaplotig	CDS	7626295	7626450	100	-	0	ID=FBgn0033755.1.mrna1.cds10;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 2218 2373 +
Chr2	stalkie_big_nohaplotig	CDS	7625361	7625444	98	-	0	ID=FBgn0033755.1.mrna1.cds11;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 2374 2457 +
Chr2	stalkie_big_nohaplotig	CDS	7625039	7625158	100	-	0	ID=FBgn0033755.1.mrna1.cds12;Name=FBgn0033755.1;Parent=FBgn0033755.1.mrna1;Target=FBgn0033755.1 2458 2577 +
Chr2	stalkie_big_nohaplotig	mRNA	33551000	33551530	.	-	.	ID=FBgn0034001.1.mrna1;Name=FBgn0034001.1;Parent=FBgn0034001.1.path1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=528;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	33551000	33551530	99	-	.	ID=FBgn0034001.1.mrna1.exon1;Name=FBgn0034001.1;Parent=FBgn0034001.1.mrna1;Target=FBgn0034001.1 531 1 .
Chr2	stalkie_big_nohaplotig	CDS	33551000	33551530	99	-	0	ID=FBgn0034001.1.mrna1.cds1;Name=FBgn0034001.1;Parent=FBgn0034001.1.mrna1;Target=FBgn0034001.1 531 1 .
Chr1	stalkie_big_nohaplotig	mRNA	43253566	43255705	.	-	.	ID=FBgn0052195.2.mrna1;Name=FBgn0052195.2;Parent=FBgn0052195.2.path1;Dir=sensecoverage=100.0;identity=99.1;matches=1112;mismatches=10;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	43255353	43255705	99	-	.	ID=FBgn0052195.2.mrna1.exon1;Name=FBgn0052195.2;Parent=FBgn0052195.2.mrna1;Target=FBgn0052195.2 1 353 +
Chr1	stalkie_big_nohaplotig	exon	43255009	43255177	100	-	.	ID=FBgn0052195.2.mrna1.exon2;Name=FBgn0052195.2;Parent=FBgn0052195.2.mrna1;Target=FBgn0052195.2 354 522 +
Chr1	stalkie_big_nohaplotig	exon	43254329	43254637	98	-	.	ID=FBgn0052195.2.mrna1.exon3;Name=FBgn0052195.2;Parent=FBgn0052195.2.mrna1;Target=FBgn0052195.2 523 831 +
Chr1	stalkie_big_nohaplotig	exon	43253566	43253856	99	-	.	ID=FBgn0052195.2.mrna1.exon4;Name=FBgn0052195.2;Parent=FBgn0052195.2.mrna1;Target=FBgn0052195.2 832 1122 +
Chr1	stalkie_big_nohaplotig	CDS	43255353	43255705	99	-	0	ID=FBgn0052195.2.mrna1.cds1;Name=FBgn0052195.2;Parent=FBgn0052195.2.mrna1;Target=FBgn0052195.2 1 353 +
Chr1	stalkie_big_nohaplotig	CDS	43255009	43255177	100	-	2	ID=FBgn0052195.2.mrna1.cds2;Name=FBgn0052195.2;Parent=FBgn0052195.2.mrna1;Target=FBgn0052195.2 354 522 +
Chr1	stalkie_big_nohaplotig	CDS	43254329	43254637	98	-	0	ID=FBgn0052195.2.mrna1.cds3;Name=FBgn0052195.2;Parent=FBgn0052195.2.mrna1;Target=FBgn0052195.2 523 831 +
Chr1	stalkie_big_nohaplotig	CDS	43253566	43253856	99	-	0	ID=FBgn0052195.2.mrna1.cds4;Name=FBgn0052195.2;Parent=FBgn0052195.2.mrna1;Target=FBgn0052195.2 832 1122 +
Chr2	stalkie_big_nohaplotig	mRNA	77573404	77574516	.	-	.	ID=ORF1407.mrna1;Name=ORF1407;Parent=ORF1407.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1112;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	77573404	77574516	99	-	.	ID=ORF1407.mrna1.exon1;Name=ORF1407;Parent=ORF1407.mrna1;Target=ORF1407 1113 1 .
Chr2	stalkie_big_nohaplotig	CDS	77573404	77574516	99	-	0	ID=ORF1407.mrna1.cds1;Name=ORF1407;Parent=ORF1407.mrna1;Target=ORF1407 1113 1 .
Chr1	stalkie_big_nohaplotig	mRNA	64927080	64933247	.	-	.	ID=FBgn0029091.1.mrna1;Name=FBgn0029091.1;Parent=FBgn0029091.1.path1;Dir=sensecoverage=99.9;identity=99.8;matches=3743;mismatches=9;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	64933153	64933247	100	-	.	ID=FBgn0029091.1.mrna1.exon1;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 1 95 +
Chr1	stalkie_big_nohaplotig	exon	64932848	64933083	100	-	.	ID=FBgn0029091.1.mrna1.exon2;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 96 331 +
Chr1	stalkie_big_nohaplotig	exon	64932603	64932769	99	-	.	ID=FBgn0029091.1.mrna1.exon3;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 332 498 +
Chr1	stalkie_big_nohaplotig	exon	64932406	64932532	100	-	.	ID=FBgn0029091.1.mrna1.exon4;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 499 625 +
Chr1	stalkie_big_nohaplotig	exon	64931757	64931957	99	-	.	ID=FBgn0029091.1.mrna1.exon5;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 626 826 +
Chr1	stalkie_big_nohaplotig	exon	64930269	64930447	99	-	.	ID=FBgn0029091.1.mrna1.exon6;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 827 1005 +
Chr1	stalkie_big_nohaplotig	exon	64929694	64930203	99	-	.	ID=FBgn0029091.1.mrna1.exon7;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 1006 1515 +
Chr1	stalkie_big_nohaplotig	exon	64929392	64929614	100	-	.	ID=FBgn0029091.1.mrna1.exon8;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 1516 1738 +
Chr1	stalkie_big_nohaplotig	exon	64928233	64929314	99	-	.	ID=FBgn0029091.1.mrna1.exon9;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 1739 2820 +
Chr1	stalkie_big_nohaplotig	exon	64928034	64928181	100	-	.	ID=FBgn0029091.1.mrna1.exon10;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 2821 2968 +
Chr1	stalkie_big_nohaplotig	exon	64927823	64927971	100	-	.	ID=FBgn0029091.1.mrna1.exon11;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 2969 3117 +
Chr1	stalkie_big_nohaplotig	exon	64927235	64927765	99	-	.	ID=FBgn0029091.1.mrna1.exon12;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 3118 3648 +
Chr1	stalkie_big_nohaplotig	exon	64927080	64927183	100	-	.	ID=FBgn0029091.1.mrna1.exon13;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 3649 3752 +
Chr1	stalkie_big_nohaplotig	CDS	64933153	64933247	100	-	0	ID=FBgn0029091.1.mrna1.cds1;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 1 95 +
Chr1	stalkie_big_nohaplotig	CDS	64932848	64933083	100	-	2	ID=FBgn0029091.1.mrna1.cds2;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 96 331 +
Chr1	stalkie_big_nohaplotig	CDS	64932603	64932769	99	-	1	ID=FBgn0029091.1.mrna1.cds3;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 332 498 +
Chr1	stalkie_big_nohaplotig	CDS	64932406	64932532	100	-	0	ID=FBgn0029091.1.mrna1.cds4;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 499 625 +
Chr1	stalkie_big_nohaplotig	CDS	64931757	64931957	99	-	1	ID=FBgn0029091.1.mrna1.cds5;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 626 826 +
Chr1	stalkie_big_nohaplotig	CDS	64930269	64930447	99	-	1	ID=FBgn0029091.1.mrna1.cds6;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 827 1005 +
Chr1	stalkie_big_nohaplotig	CDS	64929694	64930203	99	-	0	ID=FBgn0029091.1.mrna1.cds7;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 1006 1515 +
Chr1	stalkie_big_nohaplotig	CDS	64929392	64929614	100	-	0	ID=FBgn0029091.1.mrna1.cds8;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 1516 1738 +
Chr1	stalkie_big_nohaplotig	CDS	64928233	64929314	99	-	1	ID=FBgn0029091.1.mrna1.cds9;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 1739 2820 +
Chr1	stalkie_big_nohaplotig	CDS	64928034	64928181	100	-	0	ID=FBgn0029091.1.mrna1.cds10;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 2821 2968 +
Chr1	stalkie_big_nohaplotig	CDS	64927823	64927971	100	-	1	ID=FBgn0029091.1.mrna1.cds11;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 2969 3117 +
Chr1	stalkie_big_nohaplotig	CDS	64927235	64927765	99	-	0	ID=FBgn0029091.1.mrna1.cds12;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 3118 3648 +
Chr1	stalkie_big_nohaplotig	CDS	64927082	64927183	100	-	0	ID=FBgn0029091.1.mrna1.cds13;Name=FBgn0029091.1;Parent=FBgn0029091.1.mrna1;Target=FBgn0029091.1 3649 3750 +
Chr1	stalkie_big_nohaplotig	mRNA	128258590	128258676	.	+	.	ID=ORF1529.mrna1;Name=ORF1529;Parent=ORF1529.path1;Dir=indeterminatecoverage=8.1;identity=100.0;matches=87;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	128258590	128258676	100	+	.	ID=ORF1529.mrna1.exon1;Name=ORF1529;Parent=ORF1529.mrna1;Target=ORF1529 87 1 .
Chr1	stalkie_big_nohaplotig	CDS	128258590	128258676	100	+	0	ID=ORF1529.mrna1.cds1;Name=ORF1529;Parent=ORF1529.mrna1;Target=ORF1529 87 1 .
Chr1	stalkie_big_nohaplotig	mRNA	107312359	107314210	.	+	.	ID=FBgn0029859.1.mrna1;Name=FBgn0029859.1;Parent=FBgn0029859.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=894;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	107312359	107312687	100	+	.	ID=FBgn0029859.1.mrna1.exon1;Name=FBgn0029859.1;Parent=FBgn0029859.1.mrna1;Target=FBgn0029859.1 1 329 +
Chr1	stalkie_big_nohaplotig	exon	107313646	107314210	100	+	.	ID=FBgn0029859.1.mrna1.exon2;Name=FBgn0029859.1;Parent=FBgn0029859.1.mrna1;Target=FBgn0029859.1 330 894 +
Chr1	stalkie_big_nohaplotig	CDS	107312359	107312687	100	+	0	ID=FBgn0029859.1.mrna1.cds1;Name=FBgn0029859.1;Parent=FBgn0029859.1.mrna1;Target=FBgn0029859.1 1 329 +
Chr1	stalkie_big_nohaplotig	CDS	107313646	107314210	100	+	2	ID=FBgn0029859.1.mrna1.cds2;Name=FBgn0029859.1;Parent=FBgn0029859.1.mrna1;Target=FBgn0029859.1 330 894 +
Chr1	stalkie_big_nohaplotig	mRNA	109897652	109899503	.	-	.	ID=FBgn0029859.1.mrna2;Name=FBgn0029859.1;Parent=FBgn0029859.1.path2;Dir=sensecoverage=100.0;identity=100.0;matches=894;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	109899175	109899503	100	-	.	ID=FBgn0029859.1.mrna2.exon1;Name=FBgn0029859.1;Parent=FBgn0029859.1.mrna2;Target=FBgn0029859.1 1 329 +
Chr1	stalkie_big_nohaplotig	exon	109897652	109898216	100	-	.	ID=FBgn0029859.1.mrna2.exon2;Name=FBgn0029859.1;Parent=FBgn0029859.1.mrna2;Target=FBgn0029859.1 330 894 +
Chr1	stalkie_big_nohaplotig	CDS	109899175	109899503	100	-	0	ID=FBgn0029859.1.mrna2.cds1;Name=FBgn0029859.1;Parent=FBgn0029859.1.mrna2;Target=FBgn0029859.1 1 329 +
Chr1	stalkie_big_nohaplotig	CDS	109897652	109898216	100	-	2	ID=FBgn0029859.1.mrna2.cds2;Name=FBgn0029859.1;Parent=FBgn0029859.1.mrna2;Target=FBgn0029859.1 330 894 +
Chr2	stalkie_big_nohaplotig	mRNA	16941444	16951535	.	-	.	ID=FBgn0003391.1.mrna1;Name=FBgn0003391.1;Parent=FBgn0003391.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=4627;mismatches=7;indels=0;unknowns=1
Chr2	stalkie_big_nohaplotig	exon	16950804	16951535	99	-	.	ID=FBgn0003391.1.mrna1.exon1;Name=FBgn0003391.1;Parent=FBgn0003391.1.mrna1;Target=FBgn0003391.1 1 732 +
Chr2	stalkie_big_nohaplotig	exon	16941444	16945346	99	-	.	ID=FBgn0003391.1.mrna1.exon2;Name=FBgn0003391.1;Parent=FBgn0003391.1.mrna1;Target=FBgn0003391.1 733 4635 +
Chr2	stalkie_big_nohaplotig	CDS	16950804	16951535	99	-	0	ID=FBgn0003391.1.mrna1.cds1;Name=FBgn0003391.1;Parent=FBgn0003391.1.mrna1;Target=FBgn0003391.1 1 732 +
Chr2	stalkie_big_nohaplotig	CDS	16941444	16945346	99	-	0	ID=FBgn0003391.1.mrna1.cds2;Name=FBgn0003391.1;Parent=FBgn0003391.1.mrna1;Target=FBgn0003391.1 733 4635 +
Chr2	stalkie_big_nohaplotig	mRNA	16993404	16995673	.	+	.	ID=FBgn0033087.1.mrna1;Name=FBgn0033087.1;Parent=FBgn0033087.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1939;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	16993404	16993523	99	+	.	ID=FBgn0033087.1.mrna1.exon1;Name=FBgn0033087.1;Parent=FBgn0033087.1.mrna1;Target=FBgn0033087.1 1 120 +
Chr2	stalkie_big_nohaplotig	exon	16993598	16994119	99	+	.	ID=FBgn0033087.1.mrna1.exon2;Name=FBgn0033087.1;Parent=FBgn0033087.1.mrna1;Target=FBgn0033087.1 121 642 +
Chr2	stalkie_big_nohaplotig	exon	16994194	16994346	99	+	.	ID=FBgn0033087.1.mrna1.exon3;Name=FBgn0033087.1;Parent=FBgn0033087.1.mrna1;Target=FBgn0033087.1 643 795 +
Chr2	stalkie_big_nohaplotig	exon	16994412	16995196	99	+	.	ID=FBgn0033087.1.mrna1.exon4;Name=FBgn0033087.1;Parent=FBgn0033087.1.mrna1;Target=FBgn0033087.1 796 1580 +
Chr2	stalkie_big_nohaplotig	exon	16995253	16995467	100	+	.	ID=FBgn0033087.1.mrna1.exon5;Name=FBgn0033087.1;Parent=FBgn0033087.1.mrna1;Target=FBgn0033087.1 1581 1795 +
Chr2	stalkie_big_nohaplotig	exon	16995525	16995673	100	+	.	ID=FBgn0033087.1.mrna1.exon6;Name=FBgn0033087.1;Parent=FBgn0033087.1.mrna1;Target=FBgn0033087.1 1796 1944 +
Chr2	stalkie_big_nohaplotig	CDS	16993404	16993523	99	+	0	ID=FBgn0033087.1.mrna1.cds1;Name=FBgn0033087.1;Parent=FBgn0033087.1.mrna1;Target=FBgn0033087.1 1 120 +
Chr2	stalkie_big_nohaplotig	CDS	16993598	16994119	99	+	0	ID=FBgn0033087.1.mrna1.cds2;Name=FBgn0033087.1;Parent=FBgn0033087.1.mrna1;Target=FBgn0033087.1 121 642 +
Chr2	stalkie_big_nohaplotig	CDS	16994194	16994346	99	+	0	ID=FBgn0033087.1.mrna1.cds3;Name=FBgn0033087.1;Parent=FBgn0033087.1.mrna1;Target=FBgn0033087.1 643 795 +
Chr2	stalkie_big_nohaplotig	CDS	16994412	16995196	99	+	0	ID=FBgn0033087.1.mrna1.cds4;Name=FBgn0033087.1;Parent=FBgn0033087.1.mrna1;Target=FBgn0033087.1 796 1580 +
Chr2	stalkie_big_nohaplotig	CDS	16995253	16995467	100	+	2	ID=FBgn0033087.1.mrna1.cds5;Name=FBgn0033087.1;Parent=FBgn0033087.1.mrna1;Target=FBgn0033087.1 1581 1795 +
Chr2	stalkie_big_nohaplotig	CDS	16995525	16995673	100	+	1	ID=FBgn0033087.1.mrna1.cds6;Name=FBgn0033087.1;Parent=FBgn0033087.1.mrna1;Target=FBgn0033087.1 1796 1944 +
Chr2	stalkie_big_nohaplotig	mRNA	17004959	17005507	.	-	.	ID=FBgn0260390.1.mrna1;Name=FBgn0260390.1;Parent=FBgn0260390.1.path1;Dir=sensecoverage=100.0;identity=99.4;matches=483;mismatches=2;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	17005313	17005507	99	-	.	ID=FBgn0260390.1.mrna1.exon1;Name=FBgn0260390.1;Parent=FBgn0260390.1.mrna1;Target=FBgn0260390.1 1 196 +
Chr2	stalkie_big_nohaplotig	exon	17004959	17005248	99	-	.	ID=FBgn0260390.1.mrna1.exon2;Name=FBgn0260390.1;Parent=FBgn0260390.1.mrna1;Target=FBgn0260390.1 197 486 +
Chr2	stalkie_big_nohaplotig	CDS	17005456	17005505	98	-	0	ID=FBgn0260390.1.mrna1.cds1;Name=FBgn0260390.1;Parent=FBgn0260390.1.mrna1;Target=FBgn0260390.1 3 53 +
Chr2	stalkie_big_nohaplotig	mRNA	17003704	17004900	.	-	.	ID=FBgn0260398.1.mrna1;Name=FBgn0260398.1;Parent=FBgn0260398.1.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1196;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	17003704	17004900	99	-	.	ID=FBgn0260398.1.mrna1.exon1;Name=FBgn0260398.1;Parent=FBgn0260398.1.mrna1;Target=FBgn0260398.1 1197 1 .
Chr2	stalkie_big_nohaplotig	CDS	17003704	17004900	99	-	0	ID=FBgn0260398.1.mrna1.cds1;Name=FBgn0260398.1;Parent=FBgn0260398.1.mrna1;Target=FBgn0260398.1 1197 1 .
Chr1	stalkie_big_nohaplotig	mRNA	137544369	137546438	.	-	.	ID=ORF309.mrna1;Name=ORF309;Parent=ORF309.path1;Dir=indeterminatecoverage=99.7;identity=99.8;matches=2065;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	137544369	137546438	99	-	.	ID=ORF309.mrna1.exon1;Name=ORF309;Parent=ORF309.mrna1;Target=ORF309 2076 7 .
Chr1	stalkie_big_nohaplotig	CDS	137544369	137546438	99	-	0	ID=ORF309.mrna1.cds1;Name=ORF309;Parent=ORF309.mrna1;Target=ORF309 2076 7 .
Chr2	stalkie_big_nohaplotig	mRNA	141463544	141468436	.	+	.	ID=FBgn0039117.1.mrna1;Name=FBgn0039117.1;Parent=FBgn0039117.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=3587;mismatches=7;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	141463544	141464408	100	+	.	ID=FBgn0039117.1.mrna1.exon1;Name=FBgn0039117.1;Parent=FBgn0039117.1.mrna1;Target=FBgn0039117.1 1 865 +
Chr2	stalkie_big_nohaplotig	exon	141464478	141465223	100	+	.	ID=FBgn0039117.1.mrna1.exon2;Name=FBgn0039117.1;Parent=FBgn0039117.1.mrna1;Target=FBgn0039117.1 866 1611 +
Chr2	stalkie_big_nohaplotig	exon	141465280	141466020	99	+	.	ID=FBgn0039117.1.mrna1.exon3;Name=FBgn0039117.1;Parent=FBgn0039117.1.mrna1;Target=FBgn0039117.1 1612 2352 +
Chr2	stalkie_big_nohaplotig	exon	141466085	141466249	100	+	.	ID=FBgn0039117.1.mrna1.exon4;Name=FBgn0039117.1;Parent=FBgn0039117.1.mrna1;Target=FBgn0039117.1 2353 2517 +
Chr2	stalkie_big_nohaplotig	exon	141466310	141466877	99	+	.	ID=FBgn0039117.1.mrna1.exon5;Name=FBgn0039117.1;Parent=FBgn0039117.1.mrna1;Target=FBgn0039117.1 2518 3085 +
Chr2	stalkie_big_nohaplotig	exon	141467511	141467689	99	+	.	ID=FBgn0039117.1.mrna1.exon6;Name=FBgn0039117.1;Parent=FBgn0039117.1.mrna1;Target=FBgn0039117.1 3086 3264 +
Chr2	stalkie_big_nohaplotig	exon	141468047	141468175	99	+	.	ID=FBgn0039117.1.mrna1.exon7;Name=FBgn0039117.1;Parent=FBgn0039117.1.mrna1;Target=FBgn0039117.1 3265 3393 +
Chr2	stalkie_big_nohaplotig	exon	141468236	141468436	100	+	.	ID=FBgn0039117.1.mrna1.exon8;Name=FBgn0039117.1;Parent=FBgn0039117.1.mrna1;Target=FBgn0039117.1 3394 3594 +
Chr2	stalkie_big_nohaplotig	CDS	141463544	141464408	100	+	0	ID=FBgn0039117.1.mrna1.cds1;Name=FBgn0039117.1;Parent=FBgn0039117.1.mrna1;Target=FBgn0039117.1 1 865 +
Chr2	stalkie_big_nohaplotig	CDS	141464478	141465223	100	+	1	ID=FBgn0039117.1.mrna1.cds2;Name=FBgn0039117.1;Parent=FBgn0039117.1.mrna1;Target=FBgn0039117.1 866 1611 +
Chr2	stalkie_big_nohaplotig	CDS	141465280	141466020	99	+	0	ID=FBgn0039117.1.mrna1.cds3;Name=FBgn0039117.1;Parent=FBgn0039117.1.mrna1;Target=FBgn0039117.1 1612 2352 +
Chr2	stalkie_big_nohaplotig	CDS	141466085	141466249	100	+	0	ID=FBgn0039117.1.mrna1.cds4;Name=FBgn0039117.1;Parent=FBgn0039117.1.mrna1;Target=FBgn0039117.1 2353 2517 +
Chr2	stalkie_big_nohaplotig	CDS	141466310	141466877	99	+	0	ID=FBgn0039117.1.mrna1.cds5;Name=FBgn0039117.1;Parent=FBgn0039117.1.mrna1;Target=FBgn0039117.1 2518 3085 +
Chr2	stalkie_big_nohaplotig	CDS	141467511	141467689	99	+	1	ID=FBgn0039117.1.mrna1.cds6;Name=FBgn0039117.1;Parent=FBgn0039117.1.mrna1;Target=FBgn0039117.1 3086 3264 +
Chr2	stalkie_big_nohaplotig	CDS	141468047	141468175	99	+	0	ID=FBgn0039117.1.mrna1.cds7;Name=FBgn0039117.1;Parent=FBgn0039117.1.mrna1;Target=FBgn0039117.1 3265 3393 +
Chr2	stalkie_big_nohaplotig	CDS	141468236	141468436	100	+	0	ID=FBgn0039117.1.mrna1.cds8;Name=FBgn0039117.1;Parent=FBgn0039117.1.mrna1;Target=FBgn0039117.1 3394 3594 +
Chr2	stalkie_big_nohaplotig	mRNA	141502896	141505390	.	+	.	ID=FBgn0039110.1.mrna1;Name=FBgn0039110.1;Parent=FBgn0039110.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1238;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	141502896	141502950	100	+	.	ID=FBgn0039110.1.mrna1.exon1;Name=FBgn0039110.1;Parent=FBgn0039110.1.mrna1;Target=FBgn0039110.1 1 55 +
Chr2	stalkie_big_nohaplotig	exon	141503091	141503422	100	+	.	ID=FBgn0039110.1.mrna1.exon2;Name=FBgn0039110.1;Parent=FBgn0039110.1.mrna1;Target=FBgn0039110.1 56 387 +
Chr2	stalkie_big_nohaplotig	exon	141503486	141503623	100	+	.	ID=FBgn0039110.1.mrna1.exon3;Name=FBgn0039110.1;Parent=FBgn0039110.1.mrna1;Target=FBgn0039110.1 388 525 +
Chr2	stalkie_big_nohaplotig	exon	141504540	141504770	100	+	.	ID=FBgn0039110.1.mrna1.exon4;Name=FBgn0039110.1;Parent=FBgn0039110.1.mrna1;Target=FBgn0039110.1 526 756 +
Chr2	stalkie_big_nohaplotig	exon	141504836	141504985	99	+	.	ID=FBgn0039110.1.mrna1.exon5;Name=FBgn0039110.1;Parent=FBgn0039110.1.mrna1;Target=FBgn0039110.1 757 906 +
Chr2	stalkie_big_nohaplotig	exon	141505058	141505390	100	+	.	ID=FBgn0039110.1.mrna1.exon6;Name=FBgn0039110.1;Parent=FBgn0039110.1.mrna1;Target=FBgn0039110.1 907 1239 +
Chr2	stalkie_big_nohaplotig	CDS	141502896	141502950	100	+	0	ID=FBgn0039110.1.mrna1.cds1;Name=FBgn0039110.1;Parent=FBgn0039110.1.mrna1;Target=FBgn0039110.1 1 55 +
Chr2	stalkie_big_nohaplotig	CDS	141503091	141503422	100	+	1	ID=FBgn0039110.1.mrna1.cds2;Name=FBgn0039110.1;Parent=FBgn0039110.1.mrna1;Target=FBgn0039110.1 56 387 +
Chr2	stalkie_big_nohaplotig	CDS	141503486	141503623	100	+	0	ID=FBgn0039110.1.mrna1.cds3;Name=FBgn0039110.1;Parent=FBgn0039110.1.mrna1;Target=FBgn0039110.1 388 525 +
Chr2	stalkie_big_nohaplotig	CDS	141504540	141504770	100	+	0	ID=FBgn0039110.1.mrna1.cds4;Name=FBgn0039110.1;Parent=FBgn0039110.1.mrna1;Target=FBgn0039110.1 526 756 +
Chr2	stalkie_big_nohaplotig	CDS	141504836	141504985	99	+	0	ID=FBgn0039110.1.mrna1.cds5;Name=FBgn0039110.1;Parent=FBgn0039110.1.mrna1;Target=FBgn0039110.1 757 906 +
Chr2	stalkie_big_nohaplotig	CDS	141505058	141505390	100	+	0	ID=FBgn0039110.1.mrna1.cds6;Name=FBgn0039110.1;Parent=FBgn0039110.1.mrna1;Target=FBgn0039110.1 907 1239 +
Chr2	stalkie_big_nohaplotig	mRNA	141483869	141487800	.	+	.	ID=FBgn0039113.1.mrna1;Name=FBgn0039113.1;Parent=FBgn0039113.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=1312;mismatches=6;indels=0;unknowns=2
Chr2	stalkie_big_nohaplotig	exon	141483869	141483932	100	+	.	ID=FBgn0039113.1.mrna1.exon1;Name=FBgn0039113.1;Parent=FBgn0039113.1.mrna1;Target=FBgn0039113.1 1 64 +
Chr2	stalkie_big_nohaplotig	exon	141484010	141484270	98	+	.	ID=FBgn0039113.1.mrna1.exon2;Name=FBgn0039113.1;Parent=FBgn0039113.1.mrna1;Target=FBgn0039113.1 65 325 +
Chr2	stalkie_big_nohaplotig	exon	141484342	141484499	98	+	.	ID=FBgn0039113.1.mrna1.exon3;Name=FBgn0039113.1;Parent=FBgn0039113.1.mrna1;Target=FBgn0039113.1 326 483 +
Chr2	stalkie_big_nohaplotig	exon	141486900	141487699	100	+	.	ID=FBgn0039113.1.mrna1.exon4;Name=FBgn0039113.1;Parent=FBgn0039113.1.mrna1;Target=FBgn0039113.1 484 1283 +
Chr2	stalkie_big_nohaplotig	exon	141487764	141487800	100	+	.	ID=FBgn0039113.1.mrna1.exon5;Name=FBgn0039113.1;Parent=FBgn0039113.1.mrna1;Target=FBgn0039113.1 1284 1320 +
Chr2	stalkie_big_nohaplotig	CDS	141483869	141483932	100	+	0	ID=FBgn0039113.1.mrna1.cds1;Name=FBgn0039113.1;Parent=FBgn0039113.1.mrna1;Target=FBgn0039113.1 1 64 +
Chr2	stalkie_big_nohaplotig	CDS	141484010	141484270	98	+	1	ID=FBgn0039113.1.mrna1.cds2;Name=FBgn0039113.1;Parent=FBgn0039113.1.mrna1;Target=FBgn0039113.1 65 325 +
Chr2	stalkie_big_nohaplotig	CDS	141484342	141484499	98	+	1	ID=FBgn0039113.1.mrna1.cds3;Name=FBgn0039113.1;Parent=FBgn0039113.1.mrna1;Target=FBgn0039113.1 326 483 +
Chr2	stalkie_big_nohaplotig	CDS	141486900	141487699	100	+	0	ID=FBgn0039113.1.mrna1.cds4;Name=FBgn0039113.1;Parent=FBgn0039113.1.mrna1;Target=FBgn0039113.1 484 1283 +
Chr2	stalkie_big_nohaplotig	CDS	141487764	141487800	100	+	2	ID=FBgn0039113.1.mrna1.cds5;Name=FBgn0039113.1;Parent=FBgn0039113.1.mrna1;Target=FBgn0039113.1 1284 1320 +
Chr1	stalkie_big_nohaplotig	mRNA	107217637	107221151	.	+	.	ID=FBgn0032979.2.mrna1;Name=FBgn0032979.2;Parent=FBgn0032979.2.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1525;mismatches=1;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	107217637	107218004	99	+	.	ID=FBgn0032979.2.mrna1.exon1;Name=FBgn0032979.2;Parent=FBgn0032979.2.mrna1;Target=FBgn0032979.2 1 369 +
Chr1	stalkie_big_nohaplotig	exon	107219928	107220584	100	+	.	ID=FBgn0032979.2.mrna1.exon2;Name=FBgn0032979.2;Parent=FBgn0032979.2.mrna1;Target=FBgn0032979.2 370 1026 +
Chr1	stalkie_big_nohaplotig	exon	107220651	107221151	100	+	.	ID=FBgn0032979.2.mrna1.exon3;Name=FBgn0032979.2;Parent=FBgn0032979.2.mrna1;Target=FBgn0032979.2 1027 1527 +
Chr1	stalkie_big_nohaplotig	CDS	107217792	107218004	99	+	0	ID=FBgn0032979.2.mrna1.cds1;Name=FBgn0032979.2;Parent=FBgn0032979.2.mrna1;Target=FBgn0032979.2 157 369 +
Chr1	stalkie_big_nohaplotig	CDS	107219928	107220584	100	+	0	ID=FBgn0032979.2.mrna1.cds2;Name=FBgn0032979.2;Parent=FBgn0032979.2.mrna1;Target=FBgn0032979.2 370 1026 +
Chr1	stalkie_big_nohaplotig	CDS	107220651	107221151	100	+	0	ID=FBgn0032979.2.mrna1.cds3;Name=FBgn0032979.2;Parent=FBgn0032979.2.mrna1;Target=FBgn0032979.2 1027 1527 +
Chr2	stalkie_big_nohaplotig	mRNA	147946840	147958484	.	+	.	ID=ORF424.mrna1;Name=ORF424;Parent=ORF424.path1;Dir=sensecoverage=99.9;identity=99.4;matches=1840;mismatches=12;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	147946840	147947089	98	+	.	ID=ORF424.mrna1.exon1;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 1 250 +
Chr2	stalkie_big_nohaplotig	exon	147952207	147952269	100	+	.	ID=ORF424.mrna1.exon2;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 251 313 +
Chr2	stalkie_big_nohaplotig	exon	147952697	147952744	93	+	.	ID=ORF424.mrna1.exon3;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 314 361 +
Chr2	stalkie_big_nohaplotig	exon	147952842	147952886	100	+	.	ID=ORF424.mrna1.exon4;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 362 406 +
Chr2	stalkie_big_nohaplotig	exon	147952983	147953024	100	+	.	ID=ORF424.mrna1.exon5;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 407 448 +
Chr2	stalkie_big_nohaplotig	exon	147953670	147953717	100	+	.	ID=ORF424.mrna1.exon6;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 449 496 +
Chr2	stalkie_big_nohaplotig	exon	147953804	147953845	100	+	.	ID=ORF424.mrna1.exon7;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 497 538 +
Chr2	stalkie_big_nohaplotig	exon	147953925	147953972	100	+	.	ID=ORF424.mrna1.exon8;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 539 586 +
Chr2	stalkie_big_nohaplotig	exon	147954053	147954094	100	+	.	ID=ORF424.mrna1.exon9;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 587 628 +
Chr2	stalkie_big_nohaplotig	exon	147955188	147955253	98	+	.	ID=ORF424.mrna1.exon10;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 629 694 +
Chr2	stalkie_big_nohaplotig	exon	147955568	147955645	100	+	.	ID=ORF424.mrna1.exon11;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 695 772 +
Chr2	stalkie_big_nohaplotig	exon	147955723	147955785	100	+	.	ID=ORF424.mrna1.exon12;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 773 835 +
Chr2	stalkie_big_nohaplotig	exon	147955884	147955973	100	+	.	ID=ORF424.mrna1.exon13;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 836 925 +
Chr2	stalkie_big_nohaplotig	exon	147957119	147957288	98	+	.	ID=ORF424.mrna1.exon14;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 926 1095 +
Chr2	stalkie_big_nohaplotig	exon	147957362	147957612	99	+	.	ID=ORF424.mrna1.exon15;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 1096 1346 +
Chr2	stalkie_big_nohaplotig	exon	147957675	147957832	100	+	.	ID=ORF424.mrna1.exon16;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 1347 1504 +
Chr2	stalkie_big_nohaplotig	exon	147957924	147957992	100	+	.	ID=ORF424.mrna1.exon17;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 1505 1573 +
Chr2	stalkie_big_nohaplotig	exon	147958079	147958168	100	+	.	ID=ORF424.mrna1.exon18;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 1574 1663 +
Chr2	stalkie_big_nohaplotig	exon	147958237	147958335	100	+	.	ID=ORF424.mrna1.exon19;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 1664 1762 +
Chr2	stalkie_big_nohaplotig	exon	147958395	147958484	98	+	.	ID=ORF424.mrna1.exon20;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 1763 1852 +
Chr2	stalkie_big_nohaplotig	CDS	147946840	147947089	98	+	0	ID=ORF424.mrna1.cds1;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 1 250 +
Chr2	stalkie_big_nohaplotig	CDS	147952207	147952269	100	+	1	ID=ORF424.mrna1.cds2;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 251 313 +
Chr2	stalkie_big_nohaplotig	CDS	147952697	147952744	93	+	1	ID=ORF424.mrna1.cds3;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 314 361 +
Chr2	stalkie_big_nohaplotig	CDS	147952842	147952886	100	+	1	ID=ORF424.mrna1.cds4;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 362 406 +
Chr2	stalkie_big_nohaplotig	CDS	147952983	147953024	100	+	1	ID=ORF424.mrna1.cds5;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 407 448 +
Chr2	stalkie_big_nohaplotig	CDS	147953670	147953717	100	+	1	ID=ORF424.mrna1.cds6;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 449 496 +
Chr2	stalkie_big_nohaplotig	CDS	147953804	147953845	100	+	1	ID=ORF424.mrna1.cds7;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 497 538 +
Chr2	stalkie_big_nohaplotig	CDS	147953925	147953972	100	+	1	ID=ORF424.mrna1.cds8;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 539 586 +
Chr2	stalkie_big_nohaplotig	CDS	147954053	147954094	100	+	1	ID=ORF424.mrna1.cds9;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 587 628 +
Chr2	stalkie_big_nohaplotig	CDS	147955188	147955253	98	+	1	ID=ORF424.mrna1.cds10;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 629 694 +
Chr2	stalkie_big_nohaplotig	CDS	147955568	147955645	100	+	1	ID=ORF424.mrna1.cds11;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 695 772 +
Chr2	stalkie_big_nohaplotig	CDS	147955723	147955785	100	+	1	ID=ORF424.mrna1.cds12;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 773 835 +
Chr2	stalkie_big_nohaplotig	CDS	147955884	147955973	100	+	1	ID=ORF424.mrna1.cds13;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 836 925 +
Chr2	stalkie_big_nohaplotig	CDS	147957119	147957288	98	+	1	ID=ORF424.mrna1.cds14;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 926 1095 +
Chr2	stalkie_big_nohaplotig	CDS	147957362	147957612	99	+	0	ID=ORF424.mrna1.cds15;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 1096 1346 +
Chr2	stalkie_big_nohaplotig	CDS	147957675	147957832	100	+	2	ID=ORF424.mrna1.cds16;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 1347 1504 +
Chr2	stalkie_big_nohaplotig	CDS	147957924	147957992	100	+	1	ID=ORF424.mrna1.cds17;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 1505 1573 +
Chr2	stalkie_big_nohaplotig	CDS	147958079	147958168	100	+	1	ID=ORF424.mrna1.cds18;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 1574 1663 +
Chr2	stalkie_big_nohaplotig	CDS	147958237	147958335	100	+	1	ID=ORF424.mrna1.cds19;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 1664 1762 +
Chr2	stalkie_big_nohaplotig	CDS	147958395	147958483	98	+	1	ID=ORF424.mrna1.cds20;Name=ORF424;Parent=ORF424.mrna1;Target=ORF424 1763 1851 +
Chr2	stalkie_big_nohaplotig	mRNA	146782022	146783788	.	+	.	ID=ORF1233.mrna1;Name=ORF1233;Parent=ORF1233.path1;Dir=sensecoverage=100.0;identity=99.1;matches=1162;mismatches=8;indels=3;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	146782022	146782926	99	+	.	ID=ORF1233.mrna1.exon1;Name=ORF1233;Parent=ORF1233.mrna1;Target=ORF1233 1 908 +
Chr2	stalkie_big_nohaplotig	exon	146782991	146783117	98	+	.	ID=ORF1233.mrna1.exon2;Name=ORF1233;Parent=ORF1233.mrna1;Target=ORF1233 909 1035 +
Chr2	stalkie_big_nohaplotig	exon	146783651	146783788	99	+	.	ID=ORF1233.mrna1.exon3;Name=ORF1233;Parent=ORF1233.mrna1;Target=ORF1233 1036 1173 +
Chr2	stalkie_big_nohaplotig	CDS	146782022	146782926	99	+	0	ID=ORF1233.mrna1.cds1;Name=ORF1233;Parent=ORF1233.mrna1;Target=ORF1233 1 908 +
Chr2	stalkie_big_nohaplotig	CDS	146782991	146783117	98	+	2	ID=ORF1233.mrna1.cds2;Name=ORF1233;Parent=ORF1233.mrna1;Target=ORF1233 909 1035 +
Chr2	stalkie_big_nohaplotig	CDS	146783651	146783788	99	+	0	ID=ORF1233.mrna1.cds3;Name=ORF1233;Parent=ORF1233.mrna1;Target=ORF1233 1036 1173 +
ChrX	stalkie_big_nohaplotig	mRNA	85030200	85087787	.	+	.	ID=FBgn0085409.1.mrna1;Name=FBgn0085409.1;Parent=FBgn0085409.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2115;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	85030200	85030353	100	+	.	ID=FBgn0085409.1.mrna1.exon1;Name=FBgn0085409.1;Parent=FBgn0085409.1.mrna1;Target=FBgn0085409.1 1 154 +
ChrX	stalkie_big_nohaplotig	exon	85036602	85036707	100	+	.	ID=FBgn0085409.1.mrna1.exon2;Name=FBgn0085409.1;Parent=FBgn0085409.1.mrna1;Target=FBgn0085409.1 155 260 +
ChrX	stalkie_big_nohaplotig	exon	85050725	85050956	100	+	.	ID=FBgn0085409.1.mrna1.exon3;Name=FBgn0085409.1;Parent=FBgn0085409.1.mrna1;Target=FBgn0085409.1 261 492 +
ChrX	stalkie_big_nohaplotig	exon	85052569	85052716	100	+	.	ID=FBgn0085409.1.mrna1.exon4;Name=FBgn0085409.1;Parent=FBgn0085409.1.mrna1;Target=FBgn0085409.1 493 640 +
ChrX	stalkie_big_nohaplotig	exon	85065338	85065517	100	+	.	ID=FBgn0085409.1.mrna1.exon5;Name=FBgn0085409.1;Parent=FBgn0085409.1.mrna1;Target=FBgn0085409.1 641 820 +
ChrX	stalkie_big_nohaplotig	exon	85069906	85070045	100	+	.	ID=FBgn0085409.1.mrna1.exon6;Name=FBgn0085409.1;Parent=FBgn0085409.1.mrna1;Target=FBgn0085409.1 821 960 +
ChrX	stalkie_big_nohaplotig	exon	85070424	85070631	100	+	.	ID=FBgn0085409.1.mrna1.exon7;Name=FBgn0085409.1;Parent=FBgn0085409.1.mrna1;Target=FBgn0085409.1 961 1168 +
ChrX	stalkie_big_nohaplotig	exon	85083681	85083842	100	+	.	ID=FBgn0085409.1.mrna1.exon8;Name=FBgn0085409.1;Parent=FBgn0085409.1.mrna1;Target=FBgn0085409.1 1169 1330 +
ChrX	stalkie_big_nohaplotig	exon	85084211	85084443	100	+	.	ID=FBgn0085409.1.mrna1.exon9;Name=FBgn0085409.1;Parent=FBgn0085409.1.mrna1;Target=FBgn0085409.1 1331 1563 +
ChrX	stalkie_big_nohaplotig	exon	85086924	85087062	100	+	.	ID=FBgn0085409.1.mrna1.exon10;Name=FBgn0085409.1;Parent=FBgn0085409.1.mrna1;Target=FBgn0085409.1 1564 1702 +
ChrX	stalkie_big_nohaplotig	exon	85087375	85087787	100	+	.	ID=FBgn0085409.1.mrna1.exon11;Name=FBgn0085409.1;Parent=FBgn0085409.1.mrna1;Target=FBgn0085409.1 1703 2115 +
ChrX	stalkie_big_nohaplotig	CDS	85030200	85030353	100	+	0	ID=FBgn0085409.1.mrna1.cds1;Name=FBgn0085409.1;Parent=FBgn0085409.1.mrna1;Target=FBgn0085409.1 1 154 +
ChrX	stalkie_big_nohaplotig	CDS	85036602	85036707	100	+	1	ID=FBgn0085409.1.mrna1.cds2;Name=FBgn0085409.1;Parent=FBgn0085409.1.mrna1;Target=FBgn0085409.1 155 260 +
ChrX	stalkie_big_nohaplotig	CDS	85050725	85050956	100	+	2	ID=FBgn0085409.1.mrna1.cds3;Name=FBgn0085409.1;Parent=FBgn0085409.1.mrna1;Target=FBgn0085409.1 261 492 +
ChrX	stalkie_big_nohaplotig	CDS	85052569	85052716	100	+	0	ID=FBgn0085409.1.mrna1.cds4;Name=FBgn0085409.1;Parent=FBgn0085409.1.mrna1;Target=FBgn0085409.1 493 640 +
ChrX	stalkie_big_nohaplotig	CDS	85065338	85065517	100	+	1	ID=FBgn0085409.1.mrna1.cds5;Name=FBgn0085409.1;Parent=FBgn0085409.1.mrna1;Target=FBgn0085409.1 641 820 +
ChrX	stalkie_big_nohaplotig	CDS	85069906	85070045	100	+	1	ID=FBgn0085409.1.mrna1.cds6;Name=FBgn0085409.1;Parent=FBgn0085409.1.mrna1;Target=FBgn0085409.1 821 960 +
ChrX	stalkie_big_nohaplotig	CDS	85070424	85070631	100	+	0	ID=FBgn0085409.1.mrna1.cds7;Name=FBgn0085409.1;Parent=FBgn0085409.1.mrna1;Target=FBgn0085409.1 961 1168 +
ChrX	stalkie_big_nohaplotig	CDS	85083681	85083842	100	+	1	ID=FBgn0085409.1.mrna1.cds8;Name=FBgn0085409.1;Parent=FBgn0085409.1.mrna1;Target=FBgn0085409.1 1169 1330 +
ChrX	stalkie_big_nohaplotig	CDS	85084211	85084443	100	+	1	ID=FBgn0085409.1.mrna1.cds9;Name=FBgn0085409.1;Parent=FBgn0085409.1.mrna1;Target=FBgn0085409.1 1331 1563 +
ChrX	stalkie_big_nohaplotig	CDS	85086924	85087062	100	+	0	ID=FBgn0085409.1.mrna1.cds10;Name=FBgn0085409.1;Parent=FBgn0085409.1.mrna1;Target=FBgn0085409.1 1564 1702 +
ChrX	stalkie_big_nohaplotig	CDS	85087375	85087787	100	+	1	ID=FBgn0085409.1.mrna1.cds11;Name=FBgn0085409.1;Parent=FBgn0085409.1.mrna1;Target=FBgn0085409.1 1703 2115 +
Chr2	stalkie_big_nohaplotig	mRNA	77373893	77375141	.	+	.	ID=FBgn0040336.1.mrna1;Name=FBgn0040336.1;Parent=FBgn0040336.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1116;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	77373893	77374203	100	+	.	ID=FBgn0040336.1.mrna1.exon1;Name=FBgn0040336.1;Parent=FBgn0040336.1.mrna1;Target=FBgn0040336.1 1 311 +
Chr2	stalkie_big_nohaplotig	exon	77374279	77374766	100	+	.	ID=FBgn0040336.1.mrna1.exon2;Name=FBgn0040336.1;Parent=FBgn0040336.1.mrna1;Target=FBgn0040336.1 312 799 +
Chr2	stalkie_big_nohaplotig	exon	77374825	77375141	100	+	.	ID=FBgn0040336.1.mrna1.exon3;Name=FBgn0040336.1;Parent=FBgn0040336.1.mrna1;Target=FBgn0040336.1 800 1116 +
Chr2	stalkie_big_nohaplotig	CDS	77373893	77374203	100	+	0	ID=FBgn0040336.1.mrna1.cds1;Name=FBgn0040336.1;Parent=FBgn0040336.1.mrna1;Target=FBgn0040336.1 1 311 +
Chr2	stalkie_big_nohaplotig	CDS	77374279	77374766	100	+	2	ID=FBgn0040336.1.mrna1.cds2;Name=FBgn0040336.1;Parent=FBgn0040336.1.mrna1;Target=FBgn0040336.1 312 799 +
Chr2	stalkie_big_nohaplotig	CDS	77374825	77375141	100	+	1	ID=FBgn0040336.1.mrna1.cds3;Name=FBgn0040336.1;Parent=FBgn0040336.1.mrna1;Target=FBgn0040336.1 800 1116 +
Chr2	stalkie_big_nohaplotig	mRNA	77444453	77445301	.	-	.	ID=ORF2503.mrna1;Name=ORF2503;Parent=ORF2503.path1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=847;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	77444453	77445301	99	-	.	ID=ORF2503.mrna1.exon1;Name=ORF2503;Parent=ORF2503.mrna1;Target=ORF2503 849 1 .
Chr2	stalkie_big_nohaplotig	CDS	77444453	77445301	99	-	0	ID=ORF2503.mrna1.cds1;Name=ORF2503;Parent=ORF2503.mrna1;Target=ORF2503 849 1 .
Chr2	stalkie_big_nohaplotig	mRNA	2628154	2630138	.	-	.	ID=FBgn0039303.1.mrna1;Name=FBgn0039303.1;Parent=FBgn0039303.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=588;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	2630058	2630138	100	-	.	ID=FBgn0039303.1.mrna1.exon1;Name=FBgn0039303.1;Parent=FBgn0039303.1.mrna1;Target=FBgn0039303.1 1 81 +
Chr2	stalkie_big_nohaplotig	exon	2629722	2629932	100	-	.	ID=FBgn0039303.1.mrna1.exon2;Name=FBgn0039303.1;Parent=FBgn0039303.1.mrna1;Target=FBgn0039303.1 82 292 +
Chr2	stalkie_big_nohaplotig	exon	2628300	2628514	100	-	.	ID=FBgn0039303.1.mrna1.exon3;Name=FBgn0039303.1;Parent=FBgn0039303.1.mrna1;Target=FBgn0039303.1 293 507 +
Chr2	stalkie_big_nohaplotig	exon	2628154	2628234	100	-	.	ID=FBgn0039303.1.mrna1.exon4;Name=FBgn0039303.1;Parent=FBgn0039303.1.mrna1;Target=FBgn0039303.1 508 588 +
Chr2	stalkie_big_nohaplotig	CDS	2630058	2630138	100	-	0	ID=FBgn0039303.1.mrna1.cds1;Name=FBgn0039303.1;Parent=FBgn0039303.1.mrna1;Target=FBgn0039303.1 1 81 +
Chr2	stalkie_big_nohaplotig	CDS	2629722	2629932	100	-	0	ID=FBgn0039303.1.mrna1.cds2;Name=FBgn0039303.1;Parent=FBgn0039303.1.mrna1;Target=FBgn0039303.1 82 292 +
Chr2	stalkie_big_nohaplotig	CDS	2628300	2628514	100	-	1	ID=FBgn0039303.1.mrna1.cds3;Name=FBgn0039303.1;Parent=FBgn0039303.1.mrna1;Target=FBgn0039303.1 293 507 +
Chr2	stalkie_big_nohaplotig	CDS	2628154	2628234	100	-	0	ID=FBgn0039303.1.mrna1.cds4;Name=FBgn0039303.1;Parent=FBgn0039303.1.mrna1;Target=FBgn0039303.1 508 588 +
Chr2	stalkie_big_nohaplotig	mRNA	85977296	86033719	.	-	.	ID=FBgn0013984.2.mrna1;Name=FBgn0013984.2;Parent=FBgn0013984.2.path1;Dir=sensecoverage=100.0;identity=100.0;matches=7285;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	86032010	86033719	100	-	.	ID=FBgn0013984.2.mrna1.exon1;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 2 1711 +
Chr2	stalkie_big_nohaplotig	exon	85987129	85987547	100	-	.	ID=FBgn0013984.2.mrna1.exon2;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 1712 2130 +
Chr2	stalkie_big_nohaplotig	exon	85985981	85986116	100	-	.	ID=FBgn0013984.2.mrna1.exon3;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 2131 2266 +
Chr2	stalkie_big_nohaplotig	exon	85985662	85985828	100	-	.	ID=FBgn0013984.2.mrna1.exon4;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 2267 2433 +
Chr2	stalkie_big_nohaplotig	exon	85985109	85985388	100	-	.	ID=FBgn0013984.2.mrna1.exon5;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 2434 2713 +
Chr2	stalkie_big_nohaplotig	exon	85984900	85985047	100	-	.	ID=FBgn0013984.2.mrna1.exon6;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 2714 2861 +
Chr2	stalkie_big_nohaplotig	exon	85984616	85984824	100	-	.	ID=FBgn0013984.2.mrna1.exon7;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 2862 3070 +
Chr2	stalkie_big_nohaplotig	exon	85984351	85984525	100	-	.	ID=FBgn0013984.2.mrna1.exon8;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 3071 3245 +
Chr2	stalkie_big_nohaplotig	exon	85984068	85984275	100	-	.	ID=FBgn0013984.2.mrna1.exon9;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 3246 3453 +
Chr2	stalkie_big_nohaplotig	exon	85983885	85983999	100	-	.	ID=FBgn0013984.2.mrna1.exon10;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 3454 3568 +
Chr2	stalkie_big_nohaplotig	exon	85983622	85983814	100	-	.	ID=FBgn0013984.2.mrna1.exon11;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 3569 3761 +
Chr2	stalkie_big_nohaplotig	exon	85983194	85983561	100	-	.	ID=FBgn0013984.2.mrna1.exon12;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 3762 4129 +
Chr2	stalkie_big_nohaplotig	exon	85982184	85982494	100	-	.	ID=FBgn0013984.2.mrna1.exon13;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 4130 4440 +
Chr2	stalkie_big_nohaplotig	exon	85981516	85982112	100	-	.	ID=FBgn0013984.2.mrna1.exon14;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 4441 5037 +
Chr2	stalkie_big_nohaplotig	exon	85981271	85981442	100	-	.	ID=FBgn0013984.2.mrna1.exon15;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 5038 5209 +
Chr2	stalkie_big_nohaplotig	exon	85981024	85981151	100	-	.	ID=FBgn0013984.2.mrna1.exon16;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 5210 5337 +
Chr2	stalkie_big_nohaplotig	exon	85980715	85980955	99	-	.	ID=FBgn0013984.2.mrna1.exon17;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 5338 5578 +
Chr2	stalkie_big_nohaplotig	exon	85980575	85980653	100	-	.	ID=FBgn0013984.2.mrna1.exon18;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 5579 5657 +
Chr2	stalkie_big_nohaplotig	exon	85977296	85978925	100	-	.	ID=FBgn0013984.2.mrna1.exon19;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 5658 7287 +
Chr2	stalkie_big_nohaplotig	CDS	86032010	86033717	100	-	0	ID=FBgn0013984.2.mrna1.cds1;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 4 1711 +
Chr2	stalkie_big_nohaplotig	CDS	85987129	85987547	100	-	1	ID=FBgn0013984.2.mrna1.cds2;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 1712 2130 +
Chr2	stalkie_big_nohaplotig	CDS	85985981	85986116	100	-	0	ID=FBgn0013984.2.mrna1.cds3;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 2131 2266 +
Chr2	stalkie_big_nohaplotig	CDS	85985662	85985828	100	-	1	ID=FBgn0013984.2.mrna1.cds4;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 2267 2433 +
Chr2	stalkie_big_nohaplotig	CDS	85985109	85985388	100	-	0	ID=FBgn0013984.2.mrna1.cds5;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 2434 2713 +
Chr2	stalkie_big_nohaplotig	CDS	85984900	85985047	100	-	1	ID=FBgn0013984.2.mrna1.cds6;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 2714 2861 +
Chr2	stalkie_big_nohaplotig	CDS	85984616	85984824	100	-	2	ID=FBgn0013984.2.mrna1.cds7;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 2862 3070 +
Chr2	stalkie_big_nohaplotig	CDS	85984351	85984525	100	-	1	ID=FBgn0013984.2.mrna1.cds8;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 3071 3245 +
Chr2	stalkie_big_nohaplotig	CDS	85984068	85984275	100	-	2	ID=FBgn0013984.2.mrna1.cds9;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 3246 3453 +
Chr2	stalkie_big_nohaplotig	CDS	85983885	85983999	100	-	0	ID=FBgn0013984.2.mrna1.cds10;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 3454 3568 +
Chr2	stalkie_big_nohaplotig	CDS	85983622	85983814	100	-	1	ID=FBgn0013984.2.mrna1.cds11;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 3569 3761 +
Chr2	stalkie_big_nohaplotig	CDS	85983194	85983561	100	-	2	ID=FBgn0013984.2.mrna1.cds12;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 3762 4129 +
Chr2	stalkie_big_nohaplotig	CDS	85982184	85982494	100	-	1	ID=FBgn0013984.2.mrna1.cds13;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 4130 4440 +
Chr2	stalkie_big_nohaplotig	CDS	85981516	85982112	100	-	0	ID=FBgn0013984.2.mrna1.cds14;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 4441 5037 +
Chr2	stalkie_big_nohaplotig	CDS	85981271	85981442	100	-	0	ID=FBgn0013984.2.mrna1.cds15;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 5038 5209 +
Chr2	stalkie_big_nohaplotig	CDS	85981024	85981151	100	-	1	ID=FBgn0013984.2.mrna1.cds16;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 5210 5337 +
Chr2	stalkie_big_nohaplotig	CDS	85980715	85980955	99	-	0	ID=FBgn0013984.2.mrna1.cds17;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 5338 5578 +
Chr2	stalkie_big_nohaplotig	CDS	85980575	85980653	100	-	1	ID=FBgn0013984.2.mrna1.cds18;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 5579 5657 +
Chr2	stalkie_big_nohaplotig	CDS	85977296	85978925	100	-	2	ID=FBgn0013984.2.mrna1.cds19;Name=FBgn0013984.2;Parent=FBgn0013984.2.mrna1;Target=FBgn0013984.2 5658 7287 +
Chr2	stalkie_big_nohaplotig	mRNA	85954939	85968380	.	+	.	ID=FBgn0039240.1.mrna1;Name=FBgn0039240.1;Parent=FBgn0039240.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=3247;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	85954939	85955840	100	+	.	ID=FBgn0039240.1.mrna1.exon1;Name=FBgn0039240.1;Parent=FBgn0039240.1.mrna1;Target=FBgn0039240.1 1 902 +
Chr2	stalkie_big_nohaplotig	exon	85955913	85956129	99	+	.	ID=FBgn0039240.1.mrna1.exon2;Name=FBgn0039240.1;Parent=FBgn0039240.1.mrna1;Target=FBgn0039240.1 903 1119 +
Chr2	stalkie_big_nohaplotig	exon	85960105	85960381	100	+	.	ID=FBgn0039240.1.mrna1.exon3;Name=FBgn0039240.1;Parent=FBgn0039240.1.mrna1;Target=FBgn0039240.1 1120 1396 +
Chr2	stalkie_big_nohaplotig	exon	85960449	85960728	100	+	.	ID=FBgn0039240.1.mrna1.exon4;Name=FBgn0039240.1;Parent=FBgn0039240.1.mrna1;Target=FBgn0039240.1 1397 1676 +
Chr2	stalkie_big_nohaplotig	exon	85963124	85963286	100	+	.	ID=FBgn0039240.1.mrna1.exon5;Name=FBgn0039240.1;Parent=FBgn0039240.1.mrna1;Target=FBgn0039240.1 1677 1839 +
Chr2	stalkie_big_nohaplotig	exon	85963339	85963626	100	+	.	ID=FBgn0039240.1.mrna1.exon6;Name=FBgn0039240.1;Parent=FBgn0039240.1.mrna1;Target=FBgn0039240.1 1840 2127 +
Chr2	stalkie_big_nohaplotig	exon	85963689	85963883	100	+	.	ID=FBgn0039240.1.mrna1.exon7;Name=FBgn0039240.1;Parent=FBgn0039240.1.mrna1;Target=FBgn0039240.1 2128 2322 +
Chr2	stalkie_big_nohaplotig	exon	85967258	85967569	100	+	.	ID=FBgn0039240.1.mrna1.exon8;Name=FBgn0039240.1;Parent=FBgn0039240.1.mrna1;Target=FBgn0039240.1 2323 2634 +
Chr2	stalkie_big_nohaplotig	exon	85967631	85967853	100	+	.	ID=FBgn0039240.1.mrna1.exon9;Name=FBgn0039240.1;Parent=FBgn0039240.1.mrna1;Target=FBgn0039240.1 2635 2857 +
Chr2	stalkie_big_nohaplotig	exon	85967922	85968114	99	+	.	ID=FBgn0039240.1.mrna1.exon10;Name=FBgn0039240.1;Parent=FBgn0039240.1.mrna1;Target=FBgn0039240.1 2858 3050 +
Chr2	stalkie_big_nohaplotig	exon	85968182	85968380	100	+	.	ID=FBgn0039240.1.mrna1.exon11;Name=FBgn0039240.1;Parent=FBgn0039240.1.mrna1;Target=FBgn0039240.1 3051 3249 +
Chr2	stalkie_big_nohaplotig	CDS	85954939	85955840	100	+	0	ID=FBgn0039240.1.mrna1.cds1;Name=FBgn0039240.1;Parent=FBgn0039240.1.mrna1;Target=FBgn0039240.1 1 902 +
Chr2	stalkie_big_nohaplotig	CDS	85955913	85956129	99	+	2	ID=FBgn0039240.1.mrna1.cds2;Name=FBgn0039240.1;Parent=FBgn0039240.1.mrna1;Target=FBgn0039240.1 903 1119 +
Chr2	stalkie_big_nohaplotig	CDS	85960105	85960381	100	+	0	ID=FBgn0039240.1.mrna1.cds3;Name=FBgn0039240.1;Parent=FBgn0039240.1.mrna1;Target=FBgn0039240.1 1120 1396 +
Chr2	stalkie_big_nohaplotig	CDS	85960449	85960728	100	+	1	ID=FBgn0039240.1.mrna1.cds4;Name=FBgn0039240.1;Parent=FBgn0039240.1.mrna1;Target=FBgn0039240.1 1397 1676 +
Chr2	stalkie_big_nohaplotig	CDS	85963124	85963286	100	+	2	ID=FBgn0039240.1.mrna1.cds5;Name=FBgn0039240.1;Parent=FBgn0039240.1.mrna1;Target=FBgn0039240.1 1677 1839 +
Chr2	stalkie_big_nohaplotig	CDS	85963339	85963626	100	+	0	ID=FBgn0039240.1.mrna1.cds6;Name=FBgn0039240.1;Parent=FBgn0039240.1.mrna1;Target=FBgn0039240.1 1840 2127 +
Chr2	stalkie_big_nohaplotig	CDS	85963689	85963883	100	+	0	ID=FBgn0039240.1.mrna1.cds7;Name=FBgn0039240.1;Parent=FBgn0039240.1.mrna1;Target=FBgn0039240.1 2128 2322 +
Chr2	stalkie_big_nohaplotig	CDS	85967258	85967569	100	+	0	ID=FBgn0039240.1.mrna1.cds8;Name=FBgn0039240.1;Parent=FBgn0039240.1.mrna1;Target=FBgn0039240.1 2323 2634 +
Chr2	stalkie_big_nohaplotig	CDS	85967631	85967853	100	+	0	ID=FBgn0039240.1.mrna1.cds9;Name=FBgn0039240.1;Parent=FBgn0039240.1.mrna1;Target=FBgn0039240.1 2635 2857 +
Chr2	stalkie_big_nohaplotig	CDS	85967922	85968114	99	+	1	ID=FBgn0039240.1.mrna1.cds10;Name=FBgn0039240.1;Parent=FBgn0039240.1.mrna1;Target=FBgn0039240.1 2858 3050 +
Chr2	stalkie_big_nohaplotig	CDS	85968182	85968380	100	+	2	ID=FBgn0039240.1.mrna1.cds11;Name=FBgn0039240.1;Parent=FBgn0039240.1.mrna1;Target=FBgn0039240.1 3051 3249 +
Chr1	stalkie_big_nohaplotig	mRNA	158819490	158820160	.	-	.	ID=FBgn0030306.1.mrna1;Name=FBgn0030306.1;Parent=FBgn0030306.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=552;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	158820146	158820160	100	-	.	ID=FBgn0030306.1.mrna1.exon1;Name=FBgn0030306.1;Parent=FBgn0030306.1.mrna1;Target=FBgn0030306.1 1 15 +
Chr1	stalkie_big_nohaplotig	exon	158819490	158820026	100	-	.	ID=FBgn0030306.1.mrna1.exon2;Name=FBgn0030306.1;Parent=FBgn0030306.1.mrna1;Target=FBgn0030306.1 16 552 +
Chr1	stalkie_big_nohaplotig	CDS	158820146	158820160	100	-	0	ID=FBgn0030306.1.mrna1.cds1;Name=FBgn0030306.1;Parent=FBgn0030306.1.mrna1;Target=FBgn0030306.1 1 15 +
Chr1	stalkie_big_nohaplotig	CDS	158819490	158820026	100	-	0	ID=FBgn0030306.1.mrna1.cds2;Name=FBgn0030306.1;Parent=FBgn0030306.1.mrna1;Target=FBgn0030306.1 16 552 +
ChrX	stalkie_big_nohaplotig	mRNA	92382375	92387934	.	+	.	ID=FBgn0032076.1.mrna1;Name=FBgn0032076.1;Parent=FBgn0032076.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1440;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	92382375	92383134	100	+	.	ID=FBgn0032076.1.mrna1.exon1;Name=FBgn0032076.1;Parent=FBgn0032076.1.mrna1;Target=FBgn0032076.1 1 760 +
ChrX	stalkie_big_nohaplotig	exon	92387201	92387601	100	+	.	ID=FBgn0032076.1.mrna1.exon2;Name=FBgn0032076.1;Parent=FBgn0032076.1.mrna1;Target=FBgn0032076.1 761 1161 +
ChrX	stalkie_big_nohaplotig	exon	92387656	92387934	100	+	.	ID=FBgn0032076.1.mrna1.exon3;Name=FBgn0032076.1;Parent=FBgn0032076.1.mrna1;Target=FBgn0032076.1 1162 1440 +
ChrX	stalkie_big_nohaplotig	CDS	92382375	92383134	100	+	0	ID=FBgn0032076.1.mrna1.cds1;Name=FBgn0032076.1;Parent=FBgn0032076.1.mrna1;Target=FBgn0032076.1 1 760 +
ChrX	stalkie_big_nohaplotig	CDS	92387201	92387601	100	+	1	ID=FBgn0032076.1.mrna1.cds2;Name=FBgn0032076.1;Parent=FBgn0032076.1.mrna1;Target=FBgn0032076.1 761 1161 +
ChrX	stalkie_big_nohaplotig	CDS	92387656	92387934	100	+	0	ID=FBgn0032076.1.mrna1.cds3;Name=FBgn0032076.1;Parent=FBgn0032076.1.mrna1;Target=FBgn0032076.1 1162 1440 +
Chr1	stalkie_big_nohaplotig	mRNA	90258763	90266918	.	-	.	ID=FBgn0031052.1.mrna1;Name=FBgn0031052.1;Parent=FBgn0031052.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=6686;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	90266819	90266918	100	-	.	ID=FBgn0031052.1.mrna1.exon1;Name=FBgn0031052.1;Parent=FBgn0031052.1.mrna1;Target=FBgn0031052.1 1 100 +
Chr1	stalkie_big_nohaplotig	exon	90266193	90266759	100	-	.	ID=FBgn0031052.1.mrna1.exon2;Name=FBgn0031052.1;Parent=FBgn0031052.1.mrna1;Target=FBgn0031052.1 101 667 +
Chr1	stalkie_big_nohaplotig	exon	90265709	90266022	100	-	.	ID=FBgn0031052.1.mrna1.exon3;Name=FBgn0031052.1;Parent=FBgn0031052.1.mrna1;Target=FBgn0031052.1 668 981 +
Chr1	stalkie_big_nohaplotig	exon	90265289	90265649	100	-	.	ID=FBgn0031052.1.mrna1.exon4;Name=FBgn0031052.1;Parent=FBgn0031052.1.mrna1;Target=FBgn0031052.1 982 1342 +
Chr1	stalkie_big_nohaplotig	exon	90265027	90265217	100	-	.	ID=FBgn0031052.1.mrna1.exon5;Name=FBgn0031052.1;Parent=FBgn0031052.1.mrna1;Target=FBgn0031052.1 1343 1533 +
Chr1	stalkie_big_nohaplotig	exon	90264606	90264945	100	-	.	ID=FBgn0031052.1.mrna1.exon6;Name=FBgn0031052.1;Parent=FBgn0031052.1.mrna1;Target=FBgn0031052.1 1534 1873 +
Chr1	stalkie_big_nohaplotig	exon	90264005	90264549	100	-	.	ID=FBgn0031052.1.mrna1.exon7;Name=FBgn0031052.1;Parent=FBgn0031052.1.mrna1;Target=FBgn0031052.1 1874 2418 +
Chr1	stalkie_big_nohaplotig	exon	90258952	90263100	99	-	.	ID=FBgn0031052.1.mrna1.exon8;Name=FBgn0031052.1;Parent=FBgn0031052.1.mrna1;Target=FBgn0031052.1 2419 6567 +
Chr1	stalkie_big_nohaplotig	exon	90258763	90258882	100	-	.	ID=FBgn0031052.1.mrna1.exon9;Name=FBgn0031052.1;Parent=FBgn0031052.1.mrna1;Target=FBgn0031052.1 6568 6687 +
Chr1	stalkie_big_nohaplotig	CDS	90266819	90266918	100	-	0	ID=FBgn0031052.1.mrna1.cds1;Name=FBgn0031052.1;Parent=FBgn0031052.1.mrna1;Target=FBgn0031052.1 1 100 +
Chr1	stalkie_big_nohaplotig	CDS	90266193	90266759	100	-	1	ID=FBgn0031052.1.mrna1.cds2;Name=FBgn0031052.1;Parent=FBgn0031052.1.mrna1;Target=FBgn0031052.1 101 667 +
Chr1	stalkie_big_nohaplotig	CDS	90265709	90266022	100	-	1	ID=FBgn0031052.1.mrna1.cds3;Name=FBgn0031052.1;Parent=FBgn0031052.1.mrna1;Target=FBgn0031052.1 668 981 +
Chr1	stalkie_big_nohaplotig	CDS	90265289	90265649	100	-	0	ID=FBgn0031052.1.mrna1.cds4;Name=FBgn0031052.1;Parent=FBgn0031052.1.mrna1;Target=FBgn0031052.1 982 1342 +
Chr1	stalkie_big_nohaplotig	CDS	90265027	90265217	100	-	1	ID=FBgn0031052.1.mrna1.cds5;Name=FBgn0031052.1;Parent=FBgn0031052.1.mrna1;Target=FBgn0031052.1 1343 1533 +
Chr1	stalkie_big_nohaplotig	CDS	90264606	90264945	100	-	0	ID=FBgn0031052.1.mrna1.cds6;Name=FBgn0031052.1;Parent=FBgn0031052.1.mrna1;Target=FBgn0031052.1 1534 1873 +
Chr1	stalkie_big_nohaplotig	CDS	90264005	90264549	100	-	1	ID=FBgn0031052.1.mrna1.cds7;Name=FBgn0031052.1;Parent=FBgn0031052.1.mrna1;Target=FBgn0031052.1 1874 2418 +
Chr1	stalkie_big_nohaplotig	CDS	90258952	90263100	99	-	0	ID=FBgn0031052.1.mrna1.cds8;Name=FBgn0031052.1;Parent=FBgn0031052.1.mrna1;Target=FBgn0031052.1 2419 6567 +
Chr1	stalkie_big_nohaplotig	CDS	90258763	90258882	100	-	0	ID=FBgn0031052.1.mrna1.cds9;Name=FBgn0031052.1;Parent=FBgn0031052.1.mrna1;Target=FBgn0031052.1 6568 6687 +
Chr2	stalkie_big_nohaplotig	mRNA	60492977	60494023	.	+	.	ID=FBgn0034387.1.mrna1;Name=FBgn0034387.1;Parent=FBgn0034387.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=986;mismatches=7;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	60492977	60493393	99	+	.	ID=FBgn0034387.1.mrna1.exon1;Name=FBgn0034387.1;Parent=FBgn0034387.1.mrna1;Target=FBgn0034387.1 1 417 +
Chr2	stalkie_big_nohaplotig	exon	60493448	60494023	99	+	.	ID=FBgn0034387.1.mrna1.exon2;Name=FBgn0034387.1;Parent=FBgn0034387.1.mrna1;Target=FBgn0034387.1 418 993 +
Chr2	stalkie_big_nohaplotig	CDS	60492977	60493393	99	+	0	ID=FBgn0034387.1.mrna1.cds1;Name=FBgn0034387.1;Parent=FBgn0034387.1.mrna1;Target=FBgn0034387.1 1 417 +
Chr2	stalkie_big_nohaplotig	CDS	60493448	60494023	99	+	0	ID=FBgn0034387.1.mrna1.cds2;Name=FBgn0034387.1;Parent=FBgn0034387.1.mrna1;Target=FBgn0034387.1 418 993 +
Chr2	stalkie_big_nohaplotig	mRNA	150209048	150218917	.	-	.	ID=FBgn0039528.1.mrna1;Name=FBgn0039528.1;Parent=FBgn0039528.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=4012;mismatches=29;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	150218541	150218917	99	-	.	ID=FBgn0039528.1.mrna1.exon1;Name=FBgn0039528.1;Parent=FBgn0039528.1.mrna1;Target=FBgn0039528.1 1 377 +
Chr2	stalkie_big_nohaplotig	exon	150212964	150213194	99	-	.	ID=FBgn0039528.1.mrna1.exon2;Name=FBgn0039528.1;Parent=FBgn0039528.1.mrna1;Target=FBgn0039528.1 378 608 +
Chr2	stalkie_big_nohaplotig	exon	150212735	150212892	100	-	.	ID=FBgn0039528.1.mrna1.exon3;Name=FBgn0039528.1;Parent=FBgn0039528.1.mrna1;Target=FBgn0039528.1 609 766 +
Chr2	stalkie_big_nohaplotig	exon	150212523	150212670	98	-	.	ID=FBgn0039528.1.mrna1.exon4;Name=FBgn0039528.1;Parent=FBgn0039528.1.mrna1;Target=FBgn0039528.1 767 914 +
Chr2	stalkie_big_nohaplotig	exon	150211484	150212455	99	-	.	ID=FBgn0039528.1.mrna1.exon5;Name=FBgn0039528.1;Parent=FBgn0039528.1.mrna1;Target=FBgn0039528.1 915 1886 +
Chr2	stalkie_big_nohaplotig	exon	150209582	150211415	99	-	.	ID=FBgn0039528.1.mrna1.exon6;Name=FBgn0039528.1;Parent=FBgn0039528.1.mrna1;Target=FBgn0039528.1 1887 3720 +
Chr2	stalkie_big_nohaplotig	exon	150209432	150209518	96	-	.	ID=FBgn0039528.1.mrna1.exon7;Name=FBgn0039528.1;Parent=FBgn0039528.1.mrna1;Target=FBgn0039528.1 3721 3807 +
Chr2	stalkie_big_nohaplotig	exon	150209256	150209337	100	-	.	ID=FBgn0039528.1.mrna1.exon8;Name=FBgn0039528.1;Parent=FBgn0039528.1.mrna1;Target=FBgn0039528.1 3808 3889 +
Chr2	stalkie_big_nohaplotig	exon	150209048	150209199	99	-	.	ID=FBgn0039528.1.mrna1.exon9;Name=FBgn0039528.1;Parent=FBgn0039528.1.mrna1;Target=FBgn0039528.1 3890 4041 +
Chr2	stalkie_big_nohaplotig	CDS	150218541	150218917	99	-	0	ID=FBgn0039528.1.mrna1.cds1;Name=FBgn0039528.1;Parent=FBgn0039528.1.mrna1;Target=FBgn0039528.1 1 377 +
Chr2	stalkie_big_nohaplotig	CDS	150212964	150213194	99	-	2	ID=FBgn0039528.1.mrna1.cds2;Name=FBgn0039528.1;Parent=FBgn0039528.1.mrna1;Target=FBgn0039528.1 378 608 +
Chr2	stalkie_big_nohaplotig	CDS	150212735	150212892	100	-	2	ID=FBgn0039528.1.mrna1.cds3;Name=FBgn0039528.1;Parent=FBgn0039528.1.mrna1;Target=FBgn0039528.1 609 766 +
Chr2	stalkie_big_nohaplotig	CDS	150212523	150212670	98	-	1	ID=FBgn0039528.1.mrna1.cds4;Name=FBgn0039528.1;Parent=FBgn0039528.1.mrna1;Target=FBgn0039528.1 767 914 +
Chr2	stalkie_big_nohaplotig	CDS	150211484	150212455	99	-	2	ID=FBgn0039528.1.mrna1.cds5;Name=FBgn0039528.1;Parent=FBgn0039528.1.mrna1;Target=FBgn0039528.1 915 1886 +
Chr2	stalkie_big_nohaplotig	CDS	150209582	150211415	99	-	2	ID=FBgn0039528.1.mrna1.cds6;Name=FBgn0039528.1;Parent=FBgn0039528.1.mrna1;Target=FBgn0039528.1 1887 3720 +
Chr2	stalkie_big_nohaplotig	CDS	150209432	150209518	96	-	0	ID=FBgn0039528.1.mrna1.cds7;Name=FBgn0039528.1;Parent=FBgn0039528.1.mrna1;Target=FBgn0039528.1 3721 3807 +
Chr2	stalkie_big_nohaplotig	CDS	150209256	150209337	100	-	0	ID=FBgn0039528.1.mrna1.cds8;Name=FBgn0039528.1;Parent=FBgn0039528.1.mrna1;Target=FBgn0039528.1 3808 3889 +
Chr2	stalkie_big_nohaplotig	CDS	150209048	150209199	99	-	1	ID=FBgn0039528.1.mrna1.cds9;Name=FBgn0039528.1;Parent=FBgn0039528.1.mrna1;Target=FBgn0039528.1 3890 4041 +
ChrX	stalkie_big_nohaplotig	mRNA	91437812	91439590	.	-	.	ID=ORF459.mrna1;Name=ORF459;Parent=ORF459.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1778;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	91437812	91439590	99	-	.	ID=ORF459.mrna1.exon1;Name=ORF459;Parent=ORF459.mrna1;Target=ORF459 1779 1 .
ChrX	stalkie_big_nohaplotig	CDS	91437812	91439590	99	-	0	ID=ORF459.mrna1.cds1;Name=ORF459;Parent=ORF459.mrna1;Target=ORF459 1779 1 .
Chr1	stalkie_big_nohaplotig	mRNA	150453879	150463613	.	-	.	ID=FBgn0029663.1.mrna1;Name=FBgn0029663.1;Parent=FBgn0029663.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=2053;mismatches=8;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	150463363	150463613	99	-	.	ID=FBgn0029663.1.mrna1.exon1;Name=FBgn0029663.1;Parent=FBgn0029663.1.mrna1;Target=FBgn0029663.1 1 251 +
Chr1	stalkie_big_nohaplotig	exon	150462752	150462929	100	-	.	ID=FBgn0029663.1.mrna1.exon2;Name=FBgn0029663.1;Parent=FBgn0029663.1.mrna1;Target=FBgn0029663.1 252 429 +
Chr1	stalkie_big_nohaplotig	exon	150462493	150462684	100	-	.	ID=FBgn0029663.1.mrna1.exon3;Name=FBgn0029663.1;Parent=FBgn0029663.1.mrna1;Target=FBgn0029663.1 430 621 +
Chr1	stalkie_big_nohaplotig	exon	150460485	150460719	100	-	.	ID=FBgn0029663.1.mrna1.exon4;Name=FBgn0029663.1;Parent=FBgn0029663.1.mrna1;Target=FBgn0029663.1 622 856 +
Chr1	stalkie_big_nohaplotig	exon	150457136	150457488	99	-	.	ID=FBgn0029663.1.mrna1.exon5;Name=FBgn0029663.1;Parent=FBgn0029663.1.mrna1;Target=FBgn0029663.1 857 1209 +
Chr1	stalkie_big_nohaplotig	exon	150456848	150457051	99	-	.	ID=FBgn0029663.1.mrna1.exon6;Name=FBgn0029663.1;Parent=FBgn0029663.1.mrna1;Target=FBgn0029663.1 1210 1413 +
Chr1	stalkie_big_nohaplotig	exon	150456628	150456785	100	-	.	ID=FBgn0029663.1.mrna1.exon7;Name=FBgn0029663.1;Parent=FBgn0029663.1.mrna1;Target=FBgn0029663.1 1414 1571 +
Chr1	stalkie_big_nohaplotig	exon	150456305	150456568	99	-	.	ID=FBgn0029663.1.mrna1.exon8;Name=FBgn0029663.1;Parent=FBgn0029663.1.mrna1;Target=FBgn0029663.1 1572 1835 +
Chr1	stalkie_big_nohaplotig	exon	150456026	150456220	99	-	.	ID=FBgn0029663.1.mrna1.exon9;Name=FBgn0029663.1;Parent=FBgn0029663.1.mrna1;Target=FBgn0029663.1 1836 2030 +
Chr1	stalkie_big_nohaplotig	exon	150453879	150453909	100	-	.	ID=FBgn0029663.1.mrna1.exon10;Name=FBgn0029663.1;Parent=FBgn0029663.1.mrna1;Target=FBgn0029663.1 2031 2061 +
Chr1	stalkie_big_nohaplotig	CDS	150463363	150463613	99	-	0	ID=FBgn0029663.1.mrna1.cds1;Name=FBgn0029663.1;Parent=FBgn0029663.1.mrna1;Target=FBgn0029663.1 1 251 +
Chr1	stalkie_big_nohaplotig	CDS	150462752	150462929	100	-	2	ID=FBgn0029663.1.mrna1.cds2;Name=FBgn0029663.1;Parent=FBgn0029663.1.mrna1;Target=FBgn0029663.1 252 429 +
Chr1	stalkie_big_nohaplotig	CDS	150462493	150462684	100	-	0	ID=FBgn0029663.1.mrna1.cds3;Name=FBgn0029663.1;Parent=FBgn0029663.1.mrna1;Target=FBgn0029663.1 430 621 +
Chr1	stalkie_big_nohaplotig	CDS	150460485	150460719	100	-	0	ID=FBgn0029663.1.mrna1.cds4;Name=FBgn0029663.1;Parent=FBgn0029663.1.mrna1;Target=FBgn0029663.1 622 856 +
Chr1	stalkie_big_nohaplotig	CDS	150457136	150457488	99	-	1	ID=FBgn0029663.1.mrna1.cds5;Name=FBgn0029663.1;Parent=FBgn0029663.1.mrna1;Target=FBgn0029663.1 857 1209 +
Chr1	stalkie_big_nohaplotig	CDS	150456848	150457051	99	-	0	ID=FBgn0029663.1.mrna1.cds6;Name=FBgn0029663.1;Parent=FBgn0029663.1.mrna1;Target=FBgn0029663.1 1210 1413 +
Chr1	stalkie_big_nohaplotig	CDS	150456628	150456785	100	-	0	ID=FBgn0029663.1.mrna1.cds7;Name=FBgn0029663.1;Parent=FBgn0029663.1.mrna1;Target=FBgn0029663.1 1414 1571 +
Chr1	stalkie_big_nohaplotig	CDS	150456305	150456568	99	-	2	ID=FBgn0029663.1.mrna1.cds8;Name=FBgn0029663.1;Parent=FBgn0029663.1.mrna1;Target=FBgn0029663.1 1572 1835 +
Chr1	stalkie_big_nohaplotig	CDS	150456026	150456220	99	-	2	ID=FBgn0029663.1.mrna1.cds9;Name=FBgn0029663.1;Parent=FBgn0029663.1.mrna1;Target=FBgn0029663.1 1836 2030 +
Chr1	stalkie_big_nohaplotig	CDS	150453879	150453909	100	-	2	ID=FBgn0029663.1.mrna1.cds10;Name=FBgn0029663.1;Parent=FBgn0029663.1.mrna1;Target=FBgn0029663.1 2031 2061 +
Chr1	stalkie_big_nohaplotig	mRNA	150479069	150480363	.	+	.	ID=FBgn0029664.2.mrna1;Name=FBgn0029664.2;Parent=FBgn0029664.2.path1;Dir=sensecoverage=100.0;identity=99.3;matches=1227;mismatches=9;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	150479069	150479856	98	+	.	ID=FBgn0029664.2.mrna1.exon1;Name=FBgn0029664.2;Parent=FBgn0029664.2.mrna1;Target=FBgn0029664.2 1 788 +
Chr1	stalkie_big_nohaplotig	exon	150479916	150480363	99	+	.	ID=FBgn0029664.2.mrna1.exon2;Name=FBgn0029664.2;Parent=FBgn0029664.2.mrna1;Target=FBgn0029664.2 789 1236 +
Chr1	stalkie_big_nohaplotig	CDS	150479069	150479856	98	+	0	ID=FBgn0029664.2.mrna1.cds1;Name=FBgn0029664.2;Parent=FBgn0029664.2.mrna1;Target=FBgn0029664.2 1 788 +
Chr1	stalkie_big_nohaplotig	CDS	150479916	150480363	99	+	2	ID=FBgn0029664.2.mrna1.cds2;Name=FBgn0029664.2;Parent=FBgn0029664.2.mrna1;Target=FBgn0029664.2 789 1236 +
Chr1	stalkie_big_nohaplotig	mRNA	150042557	150044666	.	-	.	ID=FBgn0029997.1.mrna1;Name=FBgn0029997.1;Parent=FBgn0029997.1.path1;Dir=sensecoverage=99.6;identity=98.9;matches=1688;mismatches=7;indels=12;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	150043845	150044666	97	-	.	ID=FBgn0029997.1.mrna1.exon1;Name=FBgn0029997.1;Parent=FBgn0029997.1.mrna1;Target=FBgn0029997.1 7 828 +
Chr1	stalkie_big_nohaplotig	exon	150043582	150043779	100	-	.	ID=FBgn0029997.1.mrna1.exon2;Name=FBgn0029997.1;Parent=FBgn0029997.1.mrna1;Target=FBgn0029997.1 829 1026 +
Chr1	stalkie_big_nohaplotig	exon	150043411	150043519	99	-	.	ID=FBgn0029997.1.mrna1.exon3;Name=FBgn0029997.1;Parent=FBgn0029997.1.mrna1;Target=FBgn0029997.1 1027 1135 +
Chr1	stalkie_big_nohaplotig	exon	150043041	150043250	100	-	.	ID=FBgn0029997.1.mrna1.exon4;Name=FBgn0029997.1;Parent=FBgn0029997.1.mrna1;Target=FBgn0029997.1 1136 1345 +
Chr1	stalkie_big_nohaplotig	exon	150042801	150042973	100	-	.	ID=FBgn0029997.1.mrna1.exon5;Name=FBgn0029997.1;Parent=FBgn0029997.1.mrna1;Target=FBgn0029997.1 1346 1518 +
Chr1	stalkie_big_nohaplotig	exon	150042557	150042745	99	-	.	ID=FBgn0029997.1.mrna1.exon6;Name=FBgn0029997.1;Parent=FBgn0029997.1.mrna1;Target=FBgn0029997.1 1519 1707 +
Chr1	stalkie_big_nohaplotig	CDS	150043845	150044666	97	-	0	ID=FBgn0029997.1.mrna1.cds1;Name=FBgn0029997.1;Parent=FBgn0029997.1.mrna1;Target=FBgn0029997.1 7 828 +
Chr1	stalkie_big_nohaplotig	CDS	150043582	150043779	100	-	0	ID=FBgn0029997.1.mrna1.cds2;Name=FBgn0029997.1;Parent=FBgn0029997.1.mrna1;Target=FBgn0029997.1 829 1026 +
Chr1	stalkie_big_nohaplotig	CDS	150043411	150043519	99	-	0	ID=FBgn0029997.1.mrna1.cds3;Name=FBgn0029997.1;Parent=FBgn0029997.1.mrna1;Target=FBgn0029997.1 1027 1135 +
Chr1	stalkie_big_nohaplotig	CDS	150043041	150043250	100	-	1	ID=FBgn0029997.1.mrna1.cds4;Name=FBgn0029997.1;Parent=FBgn0029997.1.mrna1;Target=FBgn0029997.1 1136 1345 +
Chr1	stalkie_big_nohaplotig	CDS	150042801	150042973	100	-	1	ID=FBgn0029997.1.mrna1.cds5;Name=FBgn0029997.1;Parent=FBgn0029997.1.mrna1;Target=FBgn0029997.1 1346 1518 +
Chr1	stalkie_big_nohaplotig	CDS	150042557	150042745	99	-	0	ID=FBgn0029997.1.mrna1.cds6;Name=FBgn0029997.1;Parent=FBgn0029997.1.mrna1;Target=FBgn0029997.1 1519 1707 +
Chr1	stalkie_big_nohaplotig	mRNA	149984434	149996208	.	+	.	ID=FBgn0263706.1.mrna1;Name=FBgn0263706.1;Parent=FBgn0263706.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=4663;mismatches=31;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	149984434	149985182	99	+	.	ID=FBgn0263706.1.mrna1.exon1;Name=FBgn0263706.1;Parent=FBgn0263706.1.mrna1;Target=FBgn0263706.1 1 750 +
Chr1	stalkie_big_nohaplotig	exon	149985250	149985492	100	+	.	ID=FBgn0263706.1.mrna1.exon2;Name=FBgn0263706.1;Parent=FBgn0263706.1.mrna1;Target=FBgn0263706.1 751 993 +
Chr1	stalkie_big_nohaplotig	exon	149990647	149991484	99	+	.	ID=FBgn0263706.1.mrna1.exon3;Name=FBgn0263706.1;Parent=FBgn0263706.1.mrna1;Target=FBgn0263706.1 994 1831 +
Chr1	stalkie_big_nohaplotig	exon	149993285	149993886	99	+	.	ID=FBgn0263706.1.mrna1.exon4;Name=FBgn0263706.1;Parent=FBgn0263706.1.mrna1;Target=FBgn0263706.1 1832 2433 +
Chr1	stalkie_big_nohaplotig	exon	149993947	149996208	98	+	.	ID=FBgn0263706.1.mrna1.exon5;Name=FBgn0263706.1;Parent=FBgn0263706.1.mrna1;Target=FBgn0263706.1 2434 4695 +
Chr1	stalkie_big_nohaplotig	CDS	149984436	149984593	99	+	0	ID=FBgn0263706.1.mrna1.cds1;Name=FBgn0263706.1;Parent=FBgn0263706.1.mrna1;Target=FBgn0263706.1 3 161 +
ChrX	stalkie_big_nohaplotig	mRNA	55157720	55158625	.	+	.	ID=ORF2163.mrna1;Name=ORF2163;Parent=ORF2163.path1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=899;mismatches=7;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	55157720	55158625	99	+	.	ID=ORF2163.mrna1.exon1;Name=ORF2163;Parent=ORF2163.mrna1;Target=ORF2163 906 1 .
ChrX	stalkie_big_nohaplotig	CDS	55157720	55158625	99	+	0	ID=ORF2163.mrna1.cds1;Name=ORF2163;Parent=ORF2163.mrna1;Target=ORF2163 906 1 .
ChrX	stalkie_big_nohaplotig	mRNA	55192391	55193296	.	-	.	ID=ORF2163.mrna2;Name=ORF2163;Parent=ORF2163.path2;Dir=indeterminatecoverage=100.0;identity=98.9;matches=896;mismatches=10;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	55192391	55193296	98	-	.	ID=ORF2163.mrna2.exon1;Name=ORF2163;Parent=ORF2163.mrna2;Target=ORF2163 906 1 .
ChrX	stalkie_big_nohaplotig	CDS	55192391	55193296	98	-	0	ID=ORF2163.mrna2.cds1;Name=ORF2163;Parent=ORF2163.mrna2;Target=ORF2163 906 1 .
Chr1	stalkie_big_nohaplotig	mRNA	122310597	122316157	.	+	.	ID=FBgn0027296.1.mrna1;Name=FBgn0027296.1;Parent=FBgn0027296.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1178;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	122310597	122310691	100	+	.	ID=FBgn0027296.1.mrna1.exon1;Name=FBgn0027296.1;Parent=FBgn0027296.1.mrna1;Target=FBgn0027296.1 1 95 +
Chr1	stalkie_big_nohaplotig	exon	122315008	122315378	99	+	.	ID=FBgn0027296.1.mrna1.exon2;Name=FBgn0027296.1;Parent=FBgn0027296.1.mrna1;Target=FBgn0027296.1 96 466 +
Chr1	stalkie_big_nohaplotig	exon	122315442	122316157	99	+	.	ID=FBgn0027296.1.mrna1.exon3;Name=FBgn0027296.1;Parent=FBgn0027296.1.mrna1;Target=FBgn0027296.1 467 1182 +
Chr1	stalkie_big_nohaplotig	CDS	122310597	122310691	100	+	0	ID=FBgn0027296.1.mrna1.cds1;Name=FBgn0027296.1;Parent=FBgn0027296.1.mrna1;Target=FBgn0027296.1 1 95 +
Chr1	stalkie_big_nohaplotig	CDS	122315008	122315378	99	+	2	ID=FBgn0027296.1.mrna1.cds2;Name=FBgn0027296.1;Parent=FBgn0027296.1.mrna1;Target=FBgn0027296.1 96 466 +
Chr1	stalkie_big_nohaplotig	CDS	122315442	122316157	99	+	1	ID=FBgn0027296.1.mrna1.cds3;Name=FBgn0027296.1;Parent=FBgn0027296.1.mrna1;Target=FBgn0027296.1 467 1182 +
Chr1	stalkie_big_nohaplotig	mRNA	70195070	70234415	.	-	.	ID=FBgn0036980.1.mrna1;Name=FBgn0036980.1;Parent=FBgn0036980.1.path1;Dir=sensecoverage=99.6;identity=100.0;matches=2230;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	70234217	70234415	100	-	.	ID=FBgn0036980.1.mrna1.exon1;Name=FBgn0036980.1;Parent=FBgn0036980.1.mrna1;Target=FBgn0036980.1 9 207 +
Chr1	stalkie_big_nohaplotig	exon	70234055	70234158	100	-	.	ID=FBgn0036980.1.mrna1.exon2;Name=FBgn0036980.1;Parent=FBgn0036980.1.mrna1;Target=FBgn0036980.1 208 311 +
Chr1	stalkie_big_nohaplotig	exon	70205603	70205800	100	-	.	ID=FBgn0036980.1.mrna1.exon3;Name=FBgn0036980.1;Parent=FBgn0036980.1.mrna1;Target=FBgn0036980.1 312 509 +
Chr1	stalkie_big_nohaplotig	exon	70205102	70205549	100	-	.	ID=FBgn0036980.1.mrna1.exon4;Name=FBgn0036980.1;Parent=FBgn0036980.1.mrna1;Target=FBgn0036980.1 510 957 +
Chr1	stalkie_big_nohaplotig	exon	70204956	70205041	100	-	.	ID=FBgn0036980.1.mrna1.exon5;Name=FBgn0036980.1;Parent=FBgn0036980.1.mrna1;Target=FBgn0036980.1 958 1043 +
Chr1	stalkie_big_nohaplotig	exon	70204638	70204896	100	-	.	ID=FBgn0036980.1.mrna1.exon6;Name=FBgn0036980.1;Parent=FBgn0036980.1.mrna1;Target=FBgn0036980.1 1044 1302 +
Chr1	stalkie_big_nohaplotig	exon	70201658	70201768	100	-	.	ID=FBgn0036980.1.mrna1.exon7;Name=FBgn0036980.1;Parent=FBgn0036980.1.mrna1;Target=FBgn0036980.1 1303 1413 +
Chr1	stalkie_big_nohaplotig	exon	70201424	70201594	100	-	.	ID=FBgn0036980.1.mrna1.exon8;Name=FBgn0036980.1;Parent=FBgn0036980.1.mrna1;Target=FBgn0036980.1 1414 1584 +
Chr1	stalkie_big_nohaplotig	exon	70201071	70201313	100	-	.	ID=FBgn0036980.1.mrna1.exon9;Name=FBgn0036980.1;Parent=FBgn0036980.1.mrna1;Target=FBgn0036980.1 1585 1827 +
Chr1	stalkie_big_nohaplotig	exon	70200744	70201008	100	-	.	ID=FBgn0036980.1.mrna1.exon10;Name=FBgn0036980.1;Parent=FBgn0036980.1.mrna1;Target=FBgn0036980.1 1828 2092 +
Chr1	stalkie_big_nohaplotig	exon	70195070	70195215	100	-	.	ID=FBgn0036980.1.mrna1.exon11;Name=FBgn0036980.1;Parent=FBgn0036980.1.mrna1;Target=FBgn0036980.1 2093 2238 +
Chr1	stalkie_big_nohaplotig	CDS	70234217	70234414	100	-	0	ID=FBgn0036980.1.mrna1.cds1;Name=FBgn0036980.1;Parent=FBgn0036980.1.mrna1;Target=FBgn0036980.1 10 207 +
Chr1	stalkie_big_nohaplotig	CDS	70234055	70234158	100	-	0	ID=FBgn0036980.1.mrna1.cds2;Name=FBgn0036980.1;Parent=FBgn0036980.1.mrna1;Target=FBgn0036980.1 208 311 +
Chr1	stalkie_big_nohaplotig	CDS	70205603	70205800	100	-	2	ID=FBgn0036980.1.mrna1.cds3;Name=FBgn0036980.1;Parent=FBgn0036980.1.mrna1;Target=FBgn0036980.1 312 509 +
Chr1	stalkie_big_nohaplotig	CDS	70205102	70205549	100	-	2	ID=FBgn0036980.1.mrna1.cds4;Name=FBgn0036980.1;Parent=FBgn0036980.1.mrna1;Target=FBgn0036980.1 510 957 +
Chr1	stalkie_big_nohaplotig	CDS	70204956	70205041	100	-	0	ID=FBgn0036980.1.mrna1.cds5;Name=FBgn0036980.1;Parent=FBgn0036980.1.mrna1;Target=FBgn0036980.1 958 1043 +
Chr1	stalkie_big_nohaplotig	CDS	70204638	70204896	100	-	2	ID=FBgn0036980.1.mrna1.cds6;Name=FBgn0036980.1;Parent=FBgn0036980.1.mrna1;Target=FBgn0036980.1 1044 1302 +
Chr1	stalkie_big_nohaplotig	CDS	70201658	70201768	100	-	0	ID=FBgn0036980.1.mrna1.cds7;Name=FBgn0036980.1;Parent=FBgn0036980.1.mrna1;Target=FBgn0036980.1 1303 1413 +
Chr1	stalkie_big_nohaplotig	CDS	70201424	70201594	100	-	0	ID=FBgn0036980.1.mrna1.cds8;Name=FBgn0036980.1;Parent=FBgn0036980.1.mrna1;Target=FBgn0036980.1 1414 1584 +
Chr1	stalkie_big_nohaplotig	CDS	70201071	70201313	100	-	0	ID=FBgn0036980.1.mrna1.cds9;Name=FBgn0036980.1;Parent=FBgn0036980.1.mrna1;Target=FBgn0036980.1 1585 1827 +
Chr1	stalkie_big_nohaplotig	CDS	70200744	70201008	100	-	0	ID=FBgn0036980.1.mrna1.cds10;Name=FBgn0036980.1;Parent=FBgn0036980.1.mrna1;Target=FBgn0036980.1 1828 2092 +
Chr1	stalkie_big_nohaplotig	CDS	70195070	70195215	100	-	1	ID=FBgn0036980.1.mrna1.cds11;Name=FBgn0036980.1;Parent=FBgn0036980.1.mrna1;Target=FBgn0036980.1 2093 2238 +
Chr2	stalkie_big_nohaplotig	mRNA	108044248	108058800	.	-	.	ID=FBgn0037448.1.mrna1;Name=FBgn0037448.1;Parent=FBgn0037448.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2903;mismatches=7;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	108058721	108058800	100	-	.	ID=FBgn0037448.1.mrna1.exon1;Name=FBgn0037448.1;Parent=FBgn0037448.1.mrna1;Target=FBgn0037448.1 1 80 +
Chr2	stalkie_big_nohaplotig	exon	108052324	108052412	100	-	.	ID=FBgn0037448.1.mrna1.exon2;Name=FBgn0037448.1;Parent=FBgn0037448.1.mrna1;Target=FBgn0037448.1 81 169 +
Chr2	stalkie_big_nohaplotig	exon	108048065	108048288	99	-	.	ID=FBgn0037448.1.mrna1.exon3;Name=FBgn0037448.1;Parent=FBgn0037448.1.mrna1;Target=FBgn0037448.1 170 393 +
Chr2	stalkie_big_nohaplotig	exon	108047542	108048001	98	-	.	ID=FBgn0037448.1.mrna1.exon4;Name=FBgn0037448.1;Parent=FBgn0037448.1.mrna1;Target=FBgn0037448.1 394 853 +
Chr2	stalkie_big_nohaplotig	exon	108046617	108047272	99	-	.	ID=FBgn0037448.1.mrna1.exon5;Name=FBgn0037448.1;Parent=FBgn0037448.1.mrna1;Target=FBgn0037448.1 854 1509 +
Chr2	stalkie_big_nohaplotig	exon	108044864	108045709	100	-	.	ID=FBgn0037448.1.mrna1.exon6;Name=FBgn0037448.1;Parent=FBgn0037448.1.mrna1;Target=FBgn0037448.1 1510 2355 +
Chr2	stalkie_big_nohaplotig	exon	108044248	108044802	100	-	.	ID=FBgn0037448.1.mrna1.exon7;Name=FBgn0037448.1;Parent=FBgn0037448.1.mrna1;Target=FBgn0037448.1 2356 2910 +
Chr2	stalkie_big_nohaplotig	CDS	108058721	108058800	100	-	0	ID=FBgn0037448.1.mrna1.cds1;Name=FBgn0037448.1;Parent=FBgn0037448.1.mrna1;Target=FBgn0037448.1 1 80 +
Chr2	stalkie_big_nohaplotig	CDS	108052324	108052412	100	-	2	ID=FBgn0037448.1.mrna1.cds2;Name=FBgn0037448.1;Parent=FBgn0037448.1.mrna1;Target=FBgn0037448.1 81 169 +
Chr2	stalkie_big_nohaplotig	CDS	108048065	108048288	99	-	1	ID=FBgn0037448.1.mrna1.cds3;Name=FBgn0037448.1;Parent=FBgn0037448.1.mrna1;Target=FBgn0037448.1 170 393 +
Chr2	stalkie_big_nohaplotig	CDS	108047542	108048001	98	-	0	ID=FBgn0037448.1.mrna1.cds4;Name=FBgn0037448.1;Parent=FBgn0037448.1.mrna1;Target=FBgn0037448.1 394 853 +
Chr2	stalkie_big_nohaplotig	CDS	108046617	108047272	99	-	1	ID=FBgn0037448.1.mrna1.cds5;Name=FBgn0037448.1;Parent=FBgn0037448.1.mrna1;Target=FBgn0037448.1 854 1509 +
Chr2	stalkie_big_nohaplotig	CDS	108044864	108045709	100	-	0	ID=FBgn0037448.1.mrna1.cds6;Name=FBgn0037448.1;Parent=FBgn0037448.1.mrna1;Target=FBgn0037448.1 1510 2355 +
Chr2	stalkie_big_nohaplotig	CDS	108044248	108044802	100	-	0	ID=FBgn0037448.1.mrna1.cds7;Name=FBgn0037448.1;Parent=FBgn0037448.1.mrna1;Target=FBgn0037448.1 2356 2910 +
Chr2	stalkie_big_nohaplotig	mRNA	70608985	70626781	.	-	.	ID=FBgn0052016.1.mrna1;Name=FBgn0052016.1;Parent=FBgn0052016.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2255;mismatches=0;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	70626178	70626781	100	-	.	ID=FBgn0052016.1.mrna1.exon1;Name=FBgn0052016.1;Parent=FBgn0052016.1.mrna1;Target=FBgn0052016.1 1 604 +
Chr2	stalkie_big_nohaplotig	exon	70625206	70626110	100	-	.	ID=FBgn0052016.1.mrna1.exon2;Name=FBgn0052016.1;Parent=FBgn0052016.1.mrna1;Target=FBgn0052016.1 605 1509 +
Chr2	stalkie_big_nohaplotig	exon	70624999	70625110	100	-	.	ID=FBgn0052016.1.mrna1.exon3;Name=FBgn0052016.1;Parent=FBgn0052016.1.mrna1;Target=FBgn0052016.1 1510 1621 +
Chr2	stalkie_big_nohaplotig	exon	70609566	70609682	100	-	.	ID=FBgn0052016.1.mrna1.exon4;Name=FBgn0052016.1;Parent=FBgn0052016.1.mrna1;Target=FBgn0052016.1 1622 1738 +
Chr2	stalkie_big_nohaplotig	exon	70608985	70609501	99	-	.	ID=FBgn0052016.1.mrna1.exon5;Name=FBgn0052016.1;Parent=FBgn0052016.1.mrna1;Target=FBgn0052016.1 1739 2256 +
Chr2	stalkie_big_nohaplotig	CDS	70626178	70626781	100	-	0	ID=FBgn0052016.1.mrna1.cds1;Name=FBgn0052016.1;Parent=FBgn0052016.1.mrna1;Target=FBgn0052016.1 1 604 +
Chr2	stalkie_big_nohaplotig	CDS	70625206	70626110	100	-	1	ID=FBgn0052016.1.mrna1.cds2;Name=FBgn0052016.1;Parent=FBgn0052016.1.mrna1;Target=FBgn0052016.1 605 1509 +
Chr2	stalkie_big_nohaplotig	CDS	70624999	70625110	100	-	0	ID=FBgn0052016.1.mrna1.cds3;Name=FBgn0052016.1;Parent=FBgn0052016.1.mrna1;Target=FBgn0052016.1 1510 1621 +
Chr2	stalkie_big_nohaplotig	CDS	70609566	70609682	100	-	1	ID=FBgn0052016.1.mrna1.cds4;Name=FBgn0052016.1;Parent=FBgn0052016.1.mrna1;Target=FBgn0052016.1 1622 1738 +
Chr2	stalkie_big_nohaplotig	CDS	70608985	70609501	99	-	1	ID=FBgn0052016.1.mrna1.cds5;Name=FBgn0052016.1;Parent=FBgn0052016.1.mrna1;Target=FBgn0052016.1 1739 2256 +
Chr2	stalkie_big_nohaplotig	mRNA	52107663	52141417	.	-	.	ID=FBgn0033777.1.mrna1;Name=FBgn0033777.1;Parent=FBgn0033777.1.path1;Dir=sensecoverage=98.6;identity=100.0;matches=479;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	52141283	52141417	100	-	.	ID=FBgn0033777.1.mrna1.exon1;Name=FBgn0033777.1;Parent=FBgn0033777.1.mrna1;Target=FBgn0033777.1 8 142 +
Chr2	stalkie_big_nohaplotig	exon	52108029	52108149	100	-	.	ID=FBgn0033777.1.mrna1.exon2;Name=FBgn0033777.1;Parent=FBgn0033777.1.mrna1;Target=FBgn0033777.1 143 263 +
Chr2	stalkie_big_nohaplotig	exon	52107899	52107961	100	-	.	ID=FBgn0033777.1.mrna1.exon3;Name=FBgn0033777.1;Parent=FBgn0033777.1.mrna1;Target=FBgn0033777.1 264 326 +
Chr2	stalkie_big_nohaplotig	exon	52107663	52107822	100	-	.	ID=FBgn0033777.1.mrna1.exon4;Name=FBgn0033777.1;Parent=FBgn0033777.1.mrna1;Target=FBgn0033777.1 327 486 +
Chr2	stalkie_big_nohaplotig	CDS	52141283	52141415	100	-	0	ID=FBgn0033777.1.mrna1.cds1;Name=FBgn0033777.1;Parent=FBgn0033777.1.mrna1;Target=FBgn0033777.1 10 142 +
Chr2	stalkie_big_nohaplotig	CDS	52108029	52108149	100	-	1	ID=FBgn0033777.1.mrna1.cds2;Name=FBgn0033777.1;Parent=FBgn0033777.1.mrna1;Target=FBgn0033777.1 143 263 +
Chr2	stalkie_big_nohaplotig	CDS	52107899	52107961	100	-	2	ID=FBgn0033777.1.mrna1.cds3;Name=FBgn0033777.1;Parent=FBgn0033777.1.mrna1;Target=FBgn0033777.1 264 326 +
Chr2	stalkie_big_nohaplotig	CDS	52107663	52107822	100	-	2	ID=FBgn0033777.1.mrna1.cds4;Name=FBgn0033777.1;Parent=FBgn0033777.1.mrna1;Target=FBgn0033777.1 327 486 +
Chr2	stalkie_big_nohaplotig	mRNA	151212996	151222457	.	+	.	ID=FBgn0038603.1.mrna1;Name=FBgn0038603.1;Parent=FBgn0038603.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=2670;mismatches=9;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	151212996	151213193	98	+	.	ID=FBgn0038603.1.mrna1.exon1;Name=FBgn0038603.1;Parent=FBgn0038603.1.mrna1;Target=FBgn0038603.1 1 198 +
Chr2	stalkie_big_nohaplotig	exon	151216615	151216759	100	+	.	ID=FBgn0038603.1.mrna1.exon2;Name=FBgn0038603.1;Parent=FBgn0038603.1.mrna1;Target=FBgn0038603.1 199 343 +
Chr2	stalkie_big_nohaplotig	exon	151216837	151216974	100	+	.	ID=FBgn0038603.1.mrna1.exon3;Name=FBgn0038603.1;Parent=FBgn0038603.1.mrna1;Target=FBgn0038603.1 344 481 +
Chr2	stalkie_big_nohaplotig	exon	151217036	151217220	100	+	.	ID=FBgn0038603.1.mrna1.exon4;Name=FBgn0038603.1;Parent=FBgn0038603.1.mrna1;Target=FBgn0038603.1 482 666 +
Chr2	stalkie_big_nohaplotig	exon	151220112	151221195	99	+	.	ID=FBgn0038603.1.mrna1.exon5;Name=FBgn0038603.1;Parent=FBgn0038603.1.mrna1;Target=FBgn0038603.1 667 1750 +
Chr2	stalkie_big_nohaplotig	exon	151221257	151221465	99	+	.	ID=FBgn0038603.1.mrna1.exon6;Name=FBgn0038603.1;Parent=FBgn0038603.1.mrna1;Target=FBgn0038603.1 1751 1959 +
Chr2	stalkie_big_nohaplotig	exon	151221534	151221805	100	+	.	ID=FBgn0038603.1.mrna1.exon7;Name=FBgn0038603.1;Parent=FBgn0038603.1.mrna1;Target=FBgn0038603.1 1960 2231 +
Chr2	stalkie_big_nohaplotig	exon	151221869	151221942	100	+	.	ID=FBgn0038603.1.mrna1.exon8;Name=FBgn0038603.1;Parent=FBgn0038603.1.mrna1;Target=FBgn0038603.1 2232 2305 +
Chr2	stalkie_big_nohaplotig	exon	151222008	151222190	100	+	.	ID=FBgn0038603.1.mrna1.exon9;Name=FBgn0038603.1;Parent=FBgn0038603.1.mrna1;Target=FBgn0038603.1 2306 2488 +
Chr2	stalkie_big_nohaplotig	exon	151222267	151222457	98	+	.	ID=FBgn0038603.1.mrna1.exon10;Name=FBgn0038603.1;Parent=FBgn0038603.1.mrna1;Target=FBgn0038603.1 2489 2679 +
Chr2	stalkie_big_nohaplotig	CDS	151212996	151213193	98	+	0	ID=FBgn0038603.1.mrna1.cds1;Name=FBgn0038603.1;Parent=FBgn0038603.1.mrna1;Target=FBgn0038603.1 1 198 +
Chr2	stalkie_big_nohaplotig	CDS	151216615	151216759	100	+	0	ID=FBgn0038603.1.mrna1.cds2;Name=FBgn0038603.1;Parent=FBgn0038603.1.mrna1;Target=FBgn0038603.1 199 343 +
Chr2	stalkie_big_nohaplotig	CDS	151216837	151216974	100	+	1	ID=FBgn0038603.1.mrna1.cds3;Name=FBgn0038603.1;Parent=FBgn0038603.1.mrna1;Target=FBgn0038603.1 344 481 +
Chr2	stalkie_big_nohaplotig	CDS	151217036	151217220	100	+	1	ID=FBgn0038603.1.mrna1.cds4;Name=FBgn0038603.1;Parent=FBgn0038603.1.mrna1;Target=FBgn0038603.1 482 666 +
Chr2	stalkie_big_nohaplotig	CDS	151220112	151221195	99	+	0	ID=FBgn0038603.1.mrna1.cds5;Name=FBgn0038603.1;Parent=FBgn0038603.1.mrna1;Target=FBgn0038603.1 667 1750 +
Chr2	stalkie_big_nohaplotig	CDS	151221257	151221465	99	+	1	ID=FBgn0038603.1.mrna1.cds6;Name=FBgn0038603.1;Parent=FBgn0038603.1.mrna1;Target=FBgn0038603.1 1751 1959 +
Chr2	stalkie_big_nohaplotig	CDS	151221534	151221805	100	+	0	ID=FBgn0038603.1.mrna1.cds7;Name=FBgn0038603.1;Parent=FBgn0038603.1.mrna1;Target=FBgn0038603.1 1960 2231 +
Chr2	stalkie_big_nohaplotig	CDS	151221869	151221942	100	+	2	ID=FBgn0038603.1.mrna1.cds8;Name=FBgn0038603.1;Parent=FBgn0038603.1.mrna1;Target=FBgn0038603.1 2232 2305 +
Chr2	stalkie_big_nohaplotig	CDS	151222008	151222190	100	+	1	ID=FBgn0038603.1.mrna1.cds9;Name=FBgn0038603.1;Parent=FBgn0038603.1.mrna1;Target=FBgn0038603.1 2306 2488 +
Chr2	stalkie_big_nohaplotig	CDS	151222267	151222457	98	+	1	ID=FBgn0038603.1.mrna1.cds10;Name=FBgn0038603.1;Parent=FBgn0038603.1.mrna1;Target=FBgn0038603.1 2489 2679 +
Chr2	stalkie_big_nohaplotig	mRNA	150470419	150490813	.	-	.	ID=FBgn0008646.1.mrna1;Name=FBgn0008646.1;Parent=FBgn0008646.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1656;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	150489634	150490813	99	-	.	ID=FBgn0008646.1.mrna1.exon1;Name=FBgn0008646.1;Parent=FBgn0008646.1.mrna1;Target=FBgn0008646.1 1 1180 +
Chr2	stalkie_big_nohaplotig	exon	150473068	150473225	100	-	.	ID=FBgn0008646.1.mrna1.exon2;Name=FBgn0008646.1;Parent=FBgn0008646.1.mrna1;Target=FBgn0008646.1 1181 1338 +
Chr2	stalkie_big_nohaplotig	exon	150470419	150470739	100	-	.	ID=FBgn0008646.1.mrna1.exon3;Name=FBgn0008646.1;Parent=FBgn0008646.1.mrna1;Target=FBgn0008646.1 1339 1659 +
Chr2	stalkie_big_nohaplotig	CDS	150489634	150490813	99	-	0	ID=FBgn0008646.1.mrna1.cds1;Name=FBgn0008646.1;Parent=FBgn0008646.1.mrna1;Target=FBgn0008646.1 1 1180 +
Chr2	stalkie_big_nohaplotig	CDS	150473068	150473225	100	-	1	ID=FBgn0008646.1.mrna1.cds2;Name=FBgn0008646.1;Parent=FBgn0008646.1.mrna1;Target=FBgn0008646.1 1181 1338 +
Chr2	stalkie_big_nohaplotig	CDS	150470419	150470739	100	-	0	ID=FBgn0008646.1.mrna1.cds3;Name=FBgn0008646.1;Parent=FBgn0008646.1.mrna1;Target=FBgn0008646.1 1339 1659 +
Chr2	stalkie_big_nohaplotig	mRNA	116392179	116395777	.	+	.	ID=FBgn0000283.1.mrna1;Name=FBgn0000283.1;Parent=FBgn0000283.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3400;mismatches=1;indels=0;unknowns=1
Chr2	stalkie_big_nohaplotig	exon	116392179	116392607	100	+	.	ID=FBgn0000283.1.mrna1.exon1;Name=FBgn0000283.1;Parent=FBgn0000283.1.mrna1;Target=FBgn0000283.1 1 429 +
Chr2	stalkie_big_nohaplotig	exon	116392674	116393718	100	+	.	ID=FBgn0000283.1.mrna1.exon2;Name=FBgn0000283.1;Parent=FBgn0000283.1.mrna1;Target=FBgn0000283.1 430 1474 +
Chr2	stalkie_big_nohaplotig	exon	116393791	116394854	99	+	.	ID=FBgn0000283.1.mrna1.exon3;Name=FBgn0000283.1;Parent=FBgn0000283.1.mrna1;Target=FBgn0000283.1 1475 2538 +
Chr2	stalkie_big_nohaplotig	exon	116394914	116395777	100	+	.	ID=FBgn0000283.1.mrna1.exon4;Name=FBgn0000283.1;Parent=FBgn0000283.1.mrna1;Target=FBgn0000283.1 2539 3402 +
Chr2	stalkie_big_nohaplotig	CDS	116392179	116392607	100	+	0	ID=FBgn0000283.1.mrna1.cds1;Name=FBgn0000283.1;Parent=FBgn0000283.1.mrna1;Target=FBgn0000283.1 1 429 +
Chr2	stalkie_big_nohaplotig	CDS	116392674	116393718	100	+	0	ID=FBgn0000283.1.mrna1.cds2;Name=FBgn0000283.1;Parent=FBgn0000283.1.mrna1;Target=FBgn0000283.1 430 1474 +
Chr2	stalkie_big_nohaplotig	CDS	116393791	116394854	99	+	1	ID=FBgn0000283.1.mrna1.cds3;Name=FBgn0000283.1;Parent=FBgn0000283.1.mrna1;Target=FBgn0000283.1 1475 2538 +
Chr2	stalkie_big_nohaplotig	CDS	116394914	116395777	100	+	0	ID=FBgn0000283.1.mrna1.cds4;Name=FBgn0000283.1;Parent=FBgn0000283.1.mrna1;Target=FBgn0000283.1 2539 3402 +
Chr2	stalkie_big_nohaplotig	mRNA	35950990	35954941	.	-	.	ID=FBgn0022987.1.mrna1;Name=FBgn0022987.1;Parent=FBgn0022987.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1265;mismatches=2;indels=0;unknowns=2
Chr2	stalkie_big_nohaplotig	exon	35954659	35954941	99	-	.	ID=FBgn0022987.1.mrna1.exon1;Name=FBgn0022987.1;Parent=FBgn0022987.1.mrna1;Target=FBgn0022987.1 1 283 +
Chr2	stalkie_big_nohaplotig	exon	35952105	35952229	99	-	.	ID=FBgn0022987.1.mrna1.exon2;Name=FBgn0022987.1;Parent=FBgn0022987.1.mrna1;Target=FBgn0022987.1 284 408 +
Chr2	stalkie_big_nohaplotig	exon	35951557	35952041	100	-	.	ID=FBgn0022987.1.mrna1.exon3;Name=FBgn0022987.1;Parent=FBgn0022987.1.mrna1;Target=FBgn0022987.1 409 893 +
Chr2	stalkie_big_nohaplotig	exon	35951395	35951496	100	-	.	ID=FBgn0022987.1.mrna1.exon4;Name=FBgn0022987.1;Parent=FBgn0022987.1.mrna1;Target=FBgn0022987.1 894 995 +
Chr2	stalkie_big_nohaplotig	exon	35951131	35951330	100	-	.	ID=FBgn0022987.1.mrna1.exon5;Name=FBgn0022987.1;Parent=FBgn0022987.1.mrna1;Target=FBgn0022987.1 996 1195 +
Chr2	stalkie_big_nohaplotig	exon	35950990	35951063	100	-	.	ID=FBgn0022987.1.mrna1.exon6;Name=FBgn0022987.1;Parent=FBgn0022987.1.mrna1;Target=FBgn0022987.1 1196 1269 +
Chr2	stalkie_big_nohaplotig	CDS	35954659	35954941	99	-	0	ID=FBgn0022987.1.mrna1.cds1;Name=FBgn0022987.1;Parent=FBgn0022987.1.mrna1;Target=FBgn0022987.1 1 283 +
Chr2	stalkie_big_nohaplotig	CDS	35952105	35952229	99	-	1	ID=FBgn0022987.1.mrna1.cds2;Name=FBgn0022987.1;Parent=FBgn0022987.1.mrna1;Target=FBgn0022987.1 284 408 +
Chr2	stalkie_big_nohaplotig	CDS	35951557	35952041	100	-	0	ID=FBgn0022987.1.mrna1.cds3;Name=FBgn0022987.1;Parent=FBgn0022987.1.mrna1;Target=FBgn0022987.1 409 893 +
Chr2	stalkie_big_nohaplotig	CDS	35951395	35951496	100	-	2	ID=FBgn0022987.1.mrna1.cds4;Name=FBgn0022987.1;Parent=FBgn0022987.1.mrna1;Target=FBgn0022987.1 894 995 +
Chr2	stalkie_big_nohaplotig	CDS	35951131	35951330	100	-	2	ID=FBgn0022987.1.mrna1.cds5;Name=FBgn0022987.1;Parent=FBgn0022987.1.mrna1;Target=FBgn0022987.1 996 1195 +
Chr2	stalkie_big_nohaplotig	CDS	35950990	35951063	100	-	1	ID=FBgn0022987.1.mrna1.cds6;Name=FBgn0022987.1;Parent=FBgn0022987.1.mrna1;Target=FBgn0022987.1 1196 1269 +
Chr2	stalkie_big_nohaplotig	mRNA	35985662	35986489	.	+	.	ID=FBgn0022985.mrna1;Name=FBgn0022985;Parent=FBgn0022985.path1;Dir=sensecoverage=100.0;identity=100.0;matches=705;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	35985662	35985881	100	+	.	ID=FBgn0022985.mrna1.exon1;Name=FBgn0022985;Parent=FBgn0022985.mrna1;Target=FBgn0022985 1 220 +
Chr2	stalkie_big_nohaplotig	exon	35985934	35986052	100	+	.	ID=FBgn0022985.mrna1.exon2;Name=FBgn0022985;Parent=FBgn0022985.mrna1;Target=FBgn0022985 221 339 +
Chr2	stalkie_big_nohaplotig	exon	35986124	35986489	100	+	.	ID=FBgn0022985.mrna1.exon3;Name=FBgn0022985;Parent=FBgn0022985.mrna1;Target=FBgn0022985 340 705 +
Chr2	stalkie_big_nohaplotig	CDS	35985662	35985881	100	+	0	ID=FBgn0022985.mrna1.cds1;Name=FBgn0022985;Parent=FBgn0022985.mrna1;Target=FBgn0022985 1 220 +
Chr2	stalkie_big_nohaplotig	CDS	35985934	35986052	100	+	1	ID=FBgn0022985.mrna1.cds2;Name=FBgn0022985;Parent=FBgn0022985.mrna1;Target=FBgn0022985 221 339 +
Chr2	stalkie_big_nohaplotig	CDS	35986124	35986489	100	+	0	ID=FBgn0022985.mrna1.cds3;Name=FBgn0022985;Parent=FBgn0022985.mrna1;Target=FBgn0022985 340 705 +
Chr2	stalkie_big_nohaplotig	mRNA	35979642	35984072	.	-	.	ID=FBgn0022986.1.mrna1;Name=FBgn0022986.1;Parent=FBgn0022986.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1228;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	35983781	35984072	100	-	.	ID=FBgn0022986.1.mrna1.exon1;Name=FBgn0022986.1;Parent=FBgn0022986.1.mrna1;Target=FBgn0022986.1 1 292 +
Chr2	stalkie_big_nohaplotig	exon	35983212	35983713	100	-	.	ID=FBgn0022986.1.mrna1.exon2;Name=FBgn0022986.1;Parent=FBgn0022986.1.mrna1;Target=FBgn0022986.1 293 794 +
Chr2	stalkie_big_nohaplotig	exon	35981041	35981154	99	-	.	ID=FBgn0022986.1.mrna1.exon3;Name=FBgn0022986.1;Parent=FBgn0022986.1.mrna1;Target=FBgn0022986.1 795 908 +
Chr2	stalkie_big_nohaplotig	exon	35980794	35980981	99	-	.	ID=FBgn0022986.1.mrna1.exon4;Name=FBgn0022986.1;Parent=FBgn0022986.1.mrna1;Target=FBgn0022986.1 909 1096 +
Chr2	stalkie_big_nohaplotig	exon	35979642	35979775	100	-	.	ID=FBgn0022986.1.mrna1.exon5;Name=FBgn0022986.1;Parent=FBgn0022986.1.mrna1;Target=FBgn0022986.1 1097 1230 +
Chr2	stalkie_big_nohaplotig	CDS	35983781	35984072	100	-	0	ID=FBgn0022986.1.mrna1.cds1;Name=FBgn0022986.1;Parent=FBgn0022986.1.mrna1;Target=FBgn0022986.1 1 292 +
Chr2	stalkie_big_nohaplotig	CDS	35983212	35983713	100	-	1	ID=FBgn0022986.1.mrna1.cds2;Name=FBgn0022986.1;Parent=FBgn0022986.1.mrna1;Target=FBgn0022986.1 293 794 +
Chr2	stalkie_big_nohaplotig	CDS	35981041	35981154	99	-	2	ID=FBgn0022986.1.mrna1.cds3;Name=FBgn0022986.1;Parent=FBgn0022986.1.mrna1;Target=FBgn0022986.1 795 908 +
Chr2	stalkie_big_nohaplotig	CDS	35980794	35980981	99	-	2	ID=FBgn0022986.1.mrna1.cds4;Name=FBgn0022986.1;Parent=FBgn0022986.1.mrna1;Target=FBgn0022986.1 909 1096 +
Chr2	stalkie_big_nohaplotig	CDS	35979642	35979775	100	-	1	ID=FBgn0022986.1.mrna1.cds5;Name=FBgn0022986.1;Parent=FBgn0022986.1.mrna1;Target=FBgn0022986.1 1097 1230 +
Chr1	stalkie_big_nohaplotig	mRNA	43655226	43994266	.	+	.	ID=FBgn0000568.1.mrna1;Name=FBgn0000568.1;Parent=FBgn0000568.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=4237;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	43655226	43656453	99	+	.	ID=FBgn0000568.1.mrna1.exon1;Name=FBgn0000568.1;Parent=FBgn0000568.1.mrna1;Target=FBgn0000568.1 1 1228 +
Chr1	stalkie_big_nohaplotig	exon	43673052	43673140	100	+	.	ID=FBgn0000568.1.mrna1.exon2;Name=FBgn0000568.1;Parent=FBgn0000568.1.mrna1;Target=FBgn0000568.1 1229 1317 +
Chr1	stalkie_big_nohaplotig	exon	43727844	43727988	100	+	.	ID=FBgn0000568.1.mrna1.exon3;Name=FBgn0000568.1;Parent=FBgn0000568.1.mrna1;Target=FBgn0000568.1 1318 1462 +
Chr1	stalkie_big_nohaplotig	exon	43984623	43984861	100	+	.	ID=FBgn0000568.1.mrna1.exon4;Name=FBgn0000568.1;Parent=FBgn0000568.1.mrna1;Target=FBgn0000568.1 1463 1701 +
Chr1	stalkie_big_nohaplotig	exon	43991726	43994266	99	+	.	ID=FBgn0000568.1.mrna1.exon5;Name=FBgn0000568.1;Parent=FBgn0000568.1.mrna1;Target=FBgn0000568.1 1702 4242 +
Chr1	stalkie_big_nohaplotig	CDS	43655226	43656453	99	+	0	ID=FBgn0000568.1.mrna1.cds1;Name=FBgn0000568.1;Parent=FBgn0000568.1.mrna1;Target=FBgn0000568.1 1 1228 +
Chr1	stalkie_big_nohaplotig	CDS	43673052	43673140	100	+	1	ID=FBgn0000568.1.mrna1.cds2;Name=FBgn0000568.1;Parent=FBgn0000568.1.mrna1;Target=FBgn0000568.1 1229 1317 +
Chr1	stalkie_big_nohaplotig	CDS	43727844	43727988	100	+	0	ID=FBgn0000568.1.mrna1.cds3;Name=FBgn0000568.1;Parent=FBgn0000568.1.mrna1;Target=FBgn0000568.1 1318 1462 +
Chr1	stalkie_big_nohaplotig	CDS	43984623	43984861	100	+	1	ID=FBgn0000568.1.mrna1.cds4;Name=FBgn0000568.1;Parent=FBgn0000568.1.mrna1;Target=FBgn0000568.1 1463 1701 +
Chr1	stalkie_big_nohaplotig	CDS	43991726	43994266	99	+	0	ID=FBgn0000568.1.mrna1.cds5;Name=FBgn0000568.1;Parent=FBgn0000568.1.mrna1;Target=FBgn0000568.1 1702 4242 +
Chr2	stalkie_big_nohaplotig	mRNA	154062618	154066485	.	-	.	ID=FBgn0039156.1.mrna1;Name=FBgn0039156.1;Parent=FBgn0039156.1.path1;Dir=sensecoverage=100.0;identity=99.0;matches=1652;mismatches=16;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	154066464	154066485	100	-	.	ID=FBgn0039156.1.mrna1.exon1;Name=FBgn0039156.1;Parent=FBgn0039156.1.mrna1;Target=FBgn0039156.1 1 22 +
Chr2	stalkie_big_nohaplotig	exon	154064421	154064563	99	-	.	ID=FBgn0039156.1.mrna1.exon2;Name=FBgn0039156.1;Parent=FBgn0039156.1.mrna1;Target=FBgn0039156.1 23 165 +
Chr2	stalkie_big_nohaplotig	exon	154064161	154064368	97	-	.	ID=FBgn0039156.1.mrna1.exon3;Name=FBgn0039156.1;Parent=FBgn0039156.1.mrna1;Target=FBgn0039156.1 166 373 +
Chr2	stalkie_big_nohaplotig	exon	154063769	154064102	98	-	.	ID=FBgn0039156.1.mrna1.exon4;Name=FBgn0039156.1;Parent=FBgn0039156.1.mrna1;Target=FBgn0039156.1 374 707 +
Chr2	stalkie_big_nohaplotig	exon	154063554	154063713	99	-	.	ID=FBgn0039156.1.mrna1.exon5;Name=FBgn0039156.1;Parent=FBgn0039156.1.mrna1;Target=FBgn0039156.1 708 867 +
Chr2	stalkie_big_nohaplotig	exon	154063336	154063490	100	-	.	ID=FBgn0039156.1.mrna1.exon6;Name=FBgn0039156.1;Parent=FBgn0039156.1.mrna1;Target=FBgn0039156.1 868 1022 +
Chr2	stalkie_big_nohaplotig	exon	154062618	154063263	99	-	.	ID=FBgn0039156.1.mrna1.exon7;Name=FBgn0039156.1;Parent=FBgn0039156.1.mrna1;Target=FBgn0039156.1 1023 1668 +
Chr2	stalkie_big_nohaplotig	CDS	154066464	154066485	100	-	0	ID=FBgn0039156.1.mrna1.cds1;Name=FBgn0039156.1;Parent=FBgn0039156.1.mrna1;Target=FBgn0039156.1 1 22 +
Chr2	stalkie_big_nohaplotig	CDS	154064421	154064563	99	-	1	ID=FBgn0039156.1.mrna1.cds2;Name=FBgn0039156.1;Parent=FBgn0039156.1.mrna1;Target=FBgn0039156.1 23 165 +
Chr2	stalkie_big_nohaplotig	CDS	154064161	154064368	97	-	0	ID=FBgn0039156.1.mrna1.cds3;Name=FBgn0039156.1;Parent=FBgn0039156.1.mrna1;Target=FBgn0039156.1 166 373 +
Chr2	stalkie_big_nohaplotig	CDS	154063769	154064102	98	-	1	ID=FBgn0039156.1.mrna1.cds4;Name=FBgn0039156.1;Parent=FBgn0039156.1.mrna1;Target=FBgn0039156.1 374 707 +
Chr2	stalkie_big_nohaplotig	CDS	154063554	154063713	99	-	2	ID=FBgn0039156.1.mrna1.cds5;Name=FBgn0039156.1;Parent=FBgn0039156.1.mrna1;Target=FBgn0039156.1 708 867 +
Chr2	stalkie_big_nohaplotig	CDS	154063336	154063490	100	-	0	ID=FBgn0039156.1.mrna1.cds6;Name=FBgn0039156.1;Parent=FBgn0039156.1.mrna1;Target=FBgn0039156.1 868 1022 +
Chr2	stalkie_big_nohaplotig	CDS	154062618	154063263	99	-	2	ID=FBgn0039156.1.mrna1.cds7;Name=FBgn0039156.1;Parent=FBgn0039156.1.mrna1;Target=FBgn0039156.1 1023 1668 +
Chr2	stalkie_big_nohaplotig	mRNA	89621487	89632059	.	+	.	ID=FBgn0037364.1.mrna1;Name=FBgn0037364.1;Parent=FBgn0037364.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=617;mismatches=0;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	89621487	89621504	100	+	.	ID=FBgn0037364.1.mrna1.exon1;Name=FBgn0037364.1;Parent=FBgn0037364.1.mrna1;Target=FBgn0037364.1 1 18 +
Chr2	stalkie_big_nohaplotig	exon	89631461	89632059	99	+	.	ID=FBgn0037364.1.mrna1.exon2;Name=FBgn0037364.1;Parent=FBgn0037364.1.mrna1;Target=FBgn0037364.1 19 618 +
Chr2	stalkie_big_nohaplotig	CDS	89621489	89621504	100	+	0	ID=FBgn0037364.1.mrna1.cds1;Name=FBgn0037364.1;Parent=FBgn0037364.1.mrna1;Target=FBgn0037364.1 3 18 +
Chr2	stalkie_big_nohaplotig	CDS	89631461	89631635	99	+	1	ID=FBgn0037364.1.mrna1.cds2;Name=FBgn0037364.1;Parent=FBgn0037364.1.mrna1;Target=FBgn0037364.1 19 194 +
Chr1	stalkie_big_nohaplotig	mRNA	61949969	61950892	.	+	.	ID=FBgn0036356.1.mrna1;Name=FBgn0036356.1;Parent=FBgn0036356.1.path1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=918;mismatches=6;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	61949969	61950892	99	+	.	ID=FBgn0036356.1.mrna1.exon1;Name=FBgn0036356.1;Parent=FBgn0036356.1.mrna1;Target=FBgn0036356.1 924 1 .
Chr1	stalkie_big_nohaplotig	CDS	61949969	61950892	99	+	0	ID=FBgn0036356.1.mrna1.cds1;Name=FBgn0036356.1;Parent=FBgn0036356.1.mrna1;Target=FBgn0036356.1 924 1 .
Chr1	stalkie_big_nohaplotig	mRNA	61881258	61883871	.	+	.	ID=FBgn0036360.1.mrna1;Name=FBgn0036360.1;Parent=FBgn0036360.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1253;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	61881258	61881841	100	+	.	ID=FBgn0036360.1.mrna1.exon1;Name=FBgn0036360.1;Parent=FBgn0036360.1.mrna1;Target=FBgn0036360.1 1 584 +
Chr1	stalkie_big_nohaplotig	exon	61883202	61883871	99	+	.	ID=FBgn0036360.1.mrna1.exon2;Name=FBgn0036360.1;Parent=FBgn0036360.1.mrna1;Target=FBgn0036360.1 585 1254 +
Chr1	stalkie_big_nohaplotig	CDS	61881258	61881841	100	+	0	ID=FBgn0036360.1.mrna1.cds1;Name=FBgn0036360.1;Parent=FBgn0036360.1.mrna1;Target=FBgn0036360.1 1 584 +
Chr1	stalkie_big_nohaplotig	CDS	61883202	61883871	99	+	2	ID=FBgn0036360.1.mrna1.cds2;Name=FBgn0036360.1;Parent=FBgn0036360.1.mrna1;Target=FBgn0036360.1 585 1254 +
Chr1	stalkie_big_nohaplotig	mRNA	61843511	61852229	.	-	.	ID=FBgn0036365.1.mrna1;Name=FBgn0036365.1;Parent=FBgn0036365.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=5447;mismatches=16;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	61851933	61852229	100	-	.	ID=FBgn0036365.1.mrna1.exon1;Name=FBgn0036365.1;Parent=FBgn0036365.1.mrna1;Target=FBgn0036365.1 1 297 +
Chr1	stalkie_big_nohaplotig	exon	61850786	61850984	100	-	.	ID=FBgn0036365.1.mrna1.exon2;Name=FBgn0036365.1;Parent=FBgn0036365.1.mrna1;Target=FBgn0036365.1 298 496 +
Chr1	stalkie_big_nohaplotig	exon	61849665	61850221	99	-	.	ID=FBgn0036365.1.mrna1.exon3;Name=FBgn0036365.1;Parent=FBgn0036365.1.mrna1;Target=FBgn0036365.1 497 1053 +
Chr1	stalkie_big_nohaplotig	exon	61848929	61849015	100	-	.	ID=FBgn0036365.1.mrna1.exon4;Name=FBgn0036365.1;Parent=FBgn0036365.1.mrna1;Target=FBgn0036365.1 1054 1140 +
Chr1	stalkie_big_nohaplotig	exon	61847250	61848807	99	-	.	ID=FBgn0036365.1.mrna1.exon5;Name=FBgn0036365.1;Parent=FBgn0036365.1.mrna1;Target=FBgn0036365.1 1141 2698 +
Chr1	stalkie_big_nohaplotig	exon	61846855	61847192	100	-	.	ID=FBgn0036365.1.mrna1.exon6;Name=FBgn0036365.1;Parent=FBgn0036365.1.mrna1;Target=FBgn0036365.1 2699 3036 +
Chr1	stalkie_big_nohaplotig	exon	61846146	61846792	99	-	.	ID=FBgn0036365.1.mrna1.exon7;Name=FBgn0036365.1;Parent=FBgn0036365.1.mrna1;Target=FBgn0036365.1 3037 3683 +
Chr1	stalkie_big_nohaplotig	exon	61844425	61845355	99	-	.	ID=FBgn0036365.1.mrna1.exon8;Name=FBgn0036365.1;Parent=FBgn0036365.1.mrna1;Target=FBgn0036365.1 3684 4614 +
Chr1	stalkie_big_nohaplotig	exon	61843511	61844359	99	-	.	ID=FBgn0036365.1.mrna1.exon9;Name=FBgn0036365.1;Parent=FBgn0036365.1.mrna1;Target=FBgn0036365.1 4615 5463 +
Chr1	stalkie_big_nohaplotig	CDS	61851933	61852229	100	-	0	ID=FBgn0036365.1.mrna1.cds1;Name=FBgn0036365.1;Parent=FBgn0036365.1.mrna1;Target=FBgn0036365.1 1 297 +
Chr1	stalkie_big_nohaplotig	CDS	61850786	61850984	100	-	0	ID=FBgn0036365.1.mrna1.cds2;Name=FBgn0036365.1;Parent=FBgn0036365.1.mrna1;Target=FBgn0036365.1 298 496 +
Chr1	stalkie_big_nohaplotig	CDS	61849665	61850221	99	-	1	ID=FBgn0036365.1.mrna1.cds3;Name=FBgn0036365.1;Parent=FBgn0036365.1.mrna1;Target=FBgn0036365.1 497 1053 +
Chr1	stalkie_big_nohaplotig	CDS	61848929	61849015	100	-	0	ID=FBgn0036365.1.mrna1.cds4;Name=FBgn0036365.1;Parent=FBgn0036365.1.mrna1;Target=FBgn0036365.1 1054 1140 +
Chr1	stalkie_big_nohaplotig	CDS	61847250	61848807	99	-	0	ID=FBgn0036365.1.mrna1.cds5;Name=FBgn0036365.1;Parent=FBgn0036365.1.mrna1;Target=FBgn0036365.1 1141 2698 +
Chr1	stalkie_big_nohaplotig	CDS	61846855	61847192	100	-	1	ID=FBgn0036365.1.mrna1.cds6;Name=FBgn0036365.1;Parent=FBgn0036365.1.mrna1;Target=FBgn0036365.1 2699 3036 +
Chr1	stalkie_big_nohaplotig	CDS	61846146	61846792	99	-	0	ID=FBgn0036365.1.mrna1.cds7;Name=FBgn0036365.1;Parent=FBgn0036365.1.mrna1;Target=FBgn0036365.1 3037 3683 +
Chr1	stalkie_big_nohaplotig	CDS	61844425	61845355	99	-	2	ID=FBgn0036365.1.mrna1.cds8;Name=FBgn0036365.1;Parent=FBgn0036365.1.mrna1;Target=FBgn0036365.1 3684 4614 +
Chr1	stalkie_big_nohaplotig	CDS	61843511	61844359	99	-	0	ID=FBgn0036365.1.mrna1.cds9;Name=FBgn0036365.1;Parent=FBgn0036365.1.mrna1;Target=FBgn0036365.1 4615 5463 +
Chr1	stalkie_big_nohaplotig	mRNA	61841439	61842482	.	+	.	ID=FBgn0036366.1.mrna1;Name=FBgn0036366.1;Parent=FBgn0036366.1.path1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1034;mismatches=10;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	61841439	61842482	99	+	.	ID=FBgn0036366.1.mrna1.exon1;Name=FBgn0036366.1;Parent=FBgn0036366.1.mrna1;Target=FBgn0036366.1 1044 1 .
Chr1	stalkie_big_nohaplotig	CDS	61841439	61842482	99	+	0	ID=FBgn0036366.1.mrna1.cds1;Name=FBgn0036366.1;Parent=FBgn0036366.1.mrna1;Target=FBgn0036366.1 1044 1 .
Chr1	stalkie_big_nohaplotig	mRNA	61840666	61841097	.	-	.	ID=FBgn0037156.1.mrna1;Name=FBgn0037156.1;Parent=FBgn0037156.1.path1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=431;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	61840666	61841097	99	-	.	ID=FBgn0037156.1.mrna1.exon1;Name=FBgn0037156.1;Parent=FBgn0037156.1.mrna1;Target=FBgn0037156.1 432 1 .
Chr1	stalkie_big_nohaplotig	CDS	61840666	61841097	99	-	0	ID=FBgn0037156.1.mrna1.cds1;Name=FBgn0037156.1;Parent=FBgn0037156.1.mrna1;Target=FBgn0037156.1 432 1 .
Chr1	stalkie_big_nohaplotig	mRNA	45846593	45848362	.	-	.	ID=FBgn0087007.mrna1;Name=FBgn0087007;Parent=FBgn0087007.path1;Dir=sensecoverage=99.8;identity=99.4;matches=1702;mismatches=11;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	45848074	45848362	99	-	.	ID=FBgn0087007.mrna1.exon1;Name=FBgn0087007;Parent=FBgn0087007.mrna1;Target=FBgn0087007 1 289 +
Chr1	stalkie_big_nohaplotig	exon	45846593	45848016	99	-	.	ID=FBgn0087007.mrna1.exon2;Name=FBgn0087007;Parent=FBgn0087007.mrna1;Target=FBgn0087007 290 1713 +
Chr1	stalkie_big_nohaplotig	CDS	45848074	45848362	99	-	0	ID=FBgn0087007.mrna1.cds1;Name=FBgn0087007;Parent=FBgn0087007.mrna1;Target=FBgn0087007 1 289 +
Chr1	stalkie_big_nohaplotig	CDS	45846593	45848016	99	-	1	ID=FBgn0087007.mrna1.cds2;Name=FBgn0087007;Parent=FBgn0087007.mrna1;Target=FBgn0087007 290 1713 +
Chr2	stalkie_big_nohaplotig	mRNA	49219750	49221624	.	-	.	ID=FBgn0050496.1.mrna1;Name=FBgn0050496.1;Parent=FBgn0050496.1.path1;Dir=indeterminatecoverage=100.0;identity=98.7;matches=1851;mismatches=24;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	49219750	49221624	98	-	.	ID=FBgn0050496.1.mrna1.exon1;Name=FBgn0050496.1;Parent=FBgn0050496.1.mrna1;Target=FBgn0050496.1 1875 1 .
Chr2	stalkie_big_nohaplotig	CDS	49219750	49221624	98	-	0	ID=FBgn0050496.1.mrna1.cds1;Name=FBgn0050496.1;Parent=FBgn0050496.1.mrna1;Target=FBgn0050496.1 1875 1 .
Chr2	stalkie_big_nohaplotig	mRNA	2507448	2509574	.	+	.	ID=FBgn0034494.1.mrna1;Name=FBgn0034494.1;Parent=FBgn0034494.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1822;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	2507448	2508498	100	+	.	ID=FBgn0034494.1.mrna1.exon1;Name=FBgn0034494.1;Parent=FBgn0034494.1.mrna1;Target=FBgn0034494.1 1 1051 +
Chr2	stalkie_big_nohaplotig	exon	2508802	2509574	99	+	.	ID=FBgn0034494.1.mrna1.exon2;Name=FBgn0034494.1;Parent=FBgn0034494.1.mrna1;Target=FBgn0034494.1 1052 1824 +
Chr2	stalkie_big_nohaplotig	CDS	2507448	2508498	100	+	0	ID=FBgn0034494.1.mrna1.cds1;Name=FBgn0034494.1;Parent=FBgn0034494.1.mrna1;Target=FBgn0034494.1 1 1051 +
Chr2	stalkie_big_nohaplotig	CDS	2508802	2509574	99	+	1	ID=FBgn0034494.1.mrna1.cds2;Name=FBgn0034494.1;Parent=FBgn0034494.1.mrna1;Target=FBgn0034494.1 1052 1824 +
Chr2	stalkie_big_nohaplotig	mRNA	156268389	156276946	.	-	.	ID=FBgn0052944.1.mrna1;Name=FBgn0052944.1;Parent=FBgn0052944.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1535;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	156276859	156276946	100	-	.	ID=FBgn0052944.1.mrna1.exon1;Name=FBgn0052944.1;Parent=FBgn0052944.1.mrna1;Target=FBgn0052944.1 1 88 +
Chr2	stalkie_big_nohaplotig	exon	156274969	156275024	100	-	.	ID=FBgn0052944.1.mrna1.exon2;Name=FBgn0052944.1;Parent=FBgn0052944.1.mrna1;Target=FBgn0052944.1 89 144 +
Chr2	stalkie_big_nohaplotig	exon	156273510	156273675	100	-	.	ID=FBgn0052944.1.mrna1.exon3;Name=FBgn0052944.1;Parent=FBgn0052944.1.mrna1;Target=FBgn0052944.1 145 310 +
Chr2	stalkie_big_nohaplotig	exon	156271727	156271797	100	-	.	ID=FBgn0052944.1.mrna1.exon4;Name=FBgn0052944.1;Parent=FBgn0052944.1.mrna1;Target=FBgn0052944.1 311 381 +
Chr2	stalkie_big_nohaplotig	exon	156270835	156270923	100	-	.	ID=FBgn0052944.1.mrna1.exon5;Name=FBgn0052944.1;Parent=FBgn0052944.1.mrna1;Target=FBgn0052944.1 382 470 +
Chr2	stalkie_big_nohaplotig	exon	156270708	156270745	100	-	.	ID=FBgn0052944.1.mrna1.exon6;Name=FBgn0052944.1;Parent=FBgn0052944.1.mrna1;Target=FBgn0052944.1 471 508 +
Chr2	stalkie_big_nohaplotig	exon	156269481	156269606	100	-	.	ID=FBgn0052944.1.mrna1.exon7;Name=FBgn0052944.1;Parent=FBgn0052944.1.mrna1;Target=FBgn0052944.1 509 634 +
Chr2	stalkie_big_nohaplotig	exon	156269165	156269346	100	-	.	ID=FBgn0052944.1.mrna1.exon8;Name=FBgn0052944.1;Parent=FBgn0052944.1.mrna1;Target=FBgn0052944.1 635 816 +
Chr2	stalkie_big_nohaplotig	exon	156268389	156269108	99	-	.	ID=FBgn0052944.1.mrna1.exon9;Name=FBgn0052944.1;Parent=FBgn0052944.1.mrna1;Target=FBgn0052944.1 817 1536 +
Chr2	stalkie_big_nohaplotig	CDS	156276859	156276946	100	-	0	ID=FBgn0052944.1.mrna1.cds1;Name=FBgn0052944.1;Parent=FBgn0052944.1.mrna1;Target=FBgn0052944.1 1 88 +
Chr2	stalkie_big_nohaplotig	CDS	156274969	156275024	100	-	1	ID=FBgn0052944.1.mrna1.cds2;Name=FBgn0052944.1;Parent=FBgn0052944.1.mrna1;Target=FBgn0052944.1 89 144 +
Chr2	stalkie_big_nohaplotig	CDS	156273510	156273675	100	-	0	ID=FBgn0052944.1.mrna1.cds3;Name=FBgn0052944.1;Parent=FBgn0052944.1.mrna1;Target=FBgn0052944.1 145 310 +
Chr2	stalkie_big_nohaplotig	CDS	156271727	156271797	100	-	1	ID=FBgn0052944.1.mrna1.cds4;Name=FBgn0052944.1;Parent=FBgn0052944.1.mrna1;Target=FBgn0052944.1 311 381 +
Chr2	stalkie_big_nohaplotig	CDS	156270835	156270923	100	-	0	ID=FBgn0052944.1.mrna1.cds5;Name=FBgn0052944.1;Parent=FBgn0052944.1.mrna1;Target=FBgn0052944.1 382 470 +
Chr2	stalkie_big_nohaplotig	CDS	156270708	156270745	100	-	2	ID=FBgn0052944.1.mrna1.cds6;Name=FBgn0052944.1;Parent=FBgn0052944.1.mrna1;Target=FBgn0052944.1 471 508 +
Chr2	stalkie_big_nohaplotig	CDS	156269481	156269606	100	-	1	ID=FBgn0052944.1.mrna1.cds7;Name=FBgn0052944.1;Parent=FBgn0052944.1.mrna1;Target=FBgn0052944.1 509 634 +
Chr2	stalkie_big_nohaplotig	CDS	156269165	156269346	100	-	1	ID=FBgn0052944.1.mrna1.cds8;Name=FBgn0052944.1;Parent=FBgn0052944.1.mrna1;Target=FBgn0052944.1 635 816 +
Chr2	stalkie_big_nohaplotig	CDS	156268389	156269108	99	-	0	ID=FBgn0052944.1.mrna1.cds9;Name=FBgn0052944.1;Parent=FBgn0052944.1.mrna1;Target=FBgn0052944.1 817 1536 +
Chr1	stalkie_big_nohaplotig	mRNA	39130544	39131553	.	-	.	ID=FBgn0016715.1.mrna1;Name=FBgn0016715.1;Parent=FBgn0016715.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=807;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	39131381	39131553	100	-	.	ID=FBgn0016715.1.mrna1.exon1;Name=FBgn0016715.1;Parent=FBgn0016715.1.mrna1;Target=FBgn0016715.1 1 173 +
Chr1	stalkie_big_nohaplotig	exon	39131174	39131256	100	-	.	ID=FBgn0016715.1.mrna1.exon2;Name=FBgn0016715.1;Parent=FBgn0016715.1.mrna1;Target=FBgn0016715.1 174 256 +
Chr1	stalkie_big_nohaplotig	exon	39130544	39131094	100	-	.	ID=FBgn0016715.1.mrna1.exon3;Name=FBgn0016715.1;Parent=FBgn0016715.1.mrna1;Target=FBgn0016715.1 257 807 +
Chr1	stalkie_big_nohaplotig	CDS	39131381	39131553	100	-	0	ID=FBgn0016715.1.mrna1.cds1;Name=FBgn0016715.1;Parent=FBgn0016715.1.mrna1;Target=FBgn0016715.1 1 173 +
Chr1	stalkie_big_nohaplotig	CDS	39131174	39131256	100	-	2	ID=FBgn0016715.1.mrna1.cds2;Name=FBgn0016715.1;Parent=FBgn0016715.1.mrna1;Target=FBgn0016715.1 174 256 +
Chr1	stalkie_big_nohaplotig	CDS	39130544	39131094	100	-	1	ID=FBgn0016715.1.mrna1.cds3;Name=FBgn0016715.1;Parent=FBgn0016715.1.mrna1;Target=FBgn0016715.1 257 807 +
Chr2	stalkie_big_nohaplotig	mRNA	4669749	4671918	.	-	.	ID=FBgn0085265.1.mrna1;Name=FBgn0085265.1;Parent=FBgn0085265.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=609;mismatches=2;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	4671790	4671918	100	-	.	ID=FBgn0085265.1.mrna1.exon1;Name=FBgn0085265.1;Parent=FBgn0085265.1.mrna1;Target=FBgn0085265.1 1 129 +
Chr2	stalkie_big_nohaplotig	exon	4671553	4671681	99	-	.	ID=FBgn0085265.1.mrna1.exon2;Name=FBgn0085265.1;Parent=FBgn0085265.1.mrna1;Target=FBgn0085265.1 130 259 +
Chr2	stalkie_big_nohaplotig	exon	4671024	4671149	100	-	.	ID=FBgn0085265.1.mrna1.exon3;Name=FBgn0085265.1;Parent=FBgn0085265.1.mrna1;Target=FBgn0085265.1 260 385 +
Chr2	stalkie_big_nohaplotig	exon	4669749	4669975	99	-	.	ID=FBgn0085265.1.mrna1.exon4;Name=FBgn0085265.1;Parent=FBgn0085265.1.mrna1;Target=FBgn0085265.1 386 612 +
Chr2	stalkie_big_nohaplotig	CDS	4671790	4671853	100	-	0	ID=FBgn0085265.1.mrna1.cds1;Name=FBgn0085265.1;Parent=FBgn0085265.1.mrna1;Target=FBgn0085265.1 66 129 +
Chr2	stalkie_big_nohaplotig	CDS	4671624	4671681	98	-	1	ID=FBgn0085265.1.mrna1.cds2;Name=FBgn0085265.1;Parent=FBgn0085265.1.mrna1;Target=FBgn0085265.1 130 188 +
Chr1	stalkie_big_nohaplotig	mRNA	46043648	46055511	.	+	.	ID=FBgn0036461.1.mrna1;Name=FBgn0036461.1;Parent=FBgn0036461.1.path1;Dir=sensecoverage=91.3;identity=99.3;matches=1636;mismatches=11;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	46043648	46043990	99	+	.	ID=FBgn0036461.1.mrna1.exon1;Name=FBgn0036461.1;Parent=FBgn0036461.1.mrna1;Target=FBgn0036461.1 157 499 +
Chr1	stalkie_big_nohaplotig	exon	46052573	46052881	99	+	.	ID=FBgn0036461.1.mrna1.exon2;Name=FBgn0036461.1;Parent=FBgn0036461.1.mrna1;Target=FBgn0036461.1 500 808 +
Chr1	stalkie_big_nohaplotig	exon	46054517	46055511	99	+	.	ID=FBgn0036461.1.mrna1.exon3;Name=FBgn0036461.1;Parent=FBgn0036461.1.mrna1;Target=FBgn0036461.1 809 1803 +
Chr1	stalkie_big_nohaplotig	CDS	46043648	46043990	99	+	0	ID=FBgn0036461.1.mrna1.cds1;Name=FBgn0036461.1;Parent=FBgn0036461.1.mrna1;Target=FBgn0036461.1 157 499 +
Chr1	stalkie_big_nohaplotig	CDS	46052573	46052881	99	+	1	ID=FBgn0036461.1.mrna1.cds2;Name=FBgn0036461.1;Parent=FBgn0036461.1.mrna1;Target=FBgn0036461.1 500 808 +
Chr1	stalkie_big_nohaplotig	CDS	46054517	46055511	99	+	1	ID=FBgn0036461.1.mrna1.cds3;Name=FBgn0036461.1;Parent=FBgn0036461.1.mrna1;Target=FBgn0036461.1 809 1803 +
Chr1	stalkie_big_nohaplotig	mRNA	119202217	119221123	.	-	.	ID=FBgn0000611.1.mrna1;Name=FBgn0000611.1;Parent=FBgn0000611.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=874;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	119220847	119221123	99	-	.	ID=FBgn0000611.1.mrna1.exon1;Name=FBgn0000611.1;Parent=FBgn0000611.1.mrna1;Target=FBgn0000611.1 1 277 +
Chr1	stalkie_big_nohaplotig	exon	119205513	119205659	99	-	.	ID=FBgn0000611.1.mrna1.exon2;Name=FBgn0000611.1;Parent=FBgn0000611.1.mrna1;Target=FBgn0000611.1 278 424 +
Chr1	stalkie_big_nohaplotig	exon	119205267	119205441	100	-	.	ID=FBgn0000611.1.mrna1.exon3;Name=FBgn0000611.1;Parent=FBgn0000611.1.mrna1;Target=FBgn0000611.1 425 599 +
Chr1	stalkie_big_nohaplotig	exon	119202308	119202566	100	-	.	ID=FBgn0000611.1.mrna1.exon4;Name=FBgn0000611.1;Parent=FBgn0000611.1.mrna1;Target=FBgn0000611.1 600 858 +
Chr1	stalkie_big_nohaplotig	exon	119202217	119202234	100	-	.	ID=FBgn0000611.1.mrna1.exon5;Name=FBgn0000611.1;Parent=FBgn0000611.1.mrna1;Target=FBgn0000611.1 859 876 +
Chr1	stalkie_big_nohaplotig	CDS	119220847	119221123	99	-	0	ID=FBgn0000611.1.mrna1.cds1;Name=FBgn0000611.1;Parent=FBgn0000611.1.mrna1;Target=FBgn0000611.1 1 277 +
Chr1	stalkie_big_nohaplotig	CDS	119205513	119205659	99	-	1	ID=FBgn0000611.1.mrna1.cds2;Name=FBgn0000611.1;Parent=FBgn0000611.1.mrna1;Target=FBgn0000611.1 278 424 +
Chr1	stalkie_big_nohaplotig	CDS	119205267	119205441	100	-	1	ID=FBgn0000611.1.mrna1.cds3;Name=FBgn0000611.1;Parent=FBgn0000611.1.mrna1;Target=FBgn0000611.1 425 599 +
Chr1	stalkie_big_nohaplotig	CDS	119202308	119202566	100	-	2	ID=FBgn0000611.1.mrna1.cds4;Name=FBgn0000611.1;Parent=FBgn0000611.1.mrna1;Target=FBgn0000611.1 600 858 +
Chr1	stalkie_big_nohaplotig	CDS	119202217	119202234	100	-	0	ID=FBgn0000611.1.mrna1.cds5;Name=FBgn0000611.1;Parent=FBgn0000611.1.mrna1;Target=FBgn0000611.1 859 876 +
Chr1	stalkie_big_nohaplotig	mRNA	157317415	157318310	.	-	.	ID=ORF2213.mrna1;Name=ORF2213;Parent=ORF2213.path1;Dir=indeterminatecoverage=99.9;identity=99.0;matches=887;mismatches=9;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	157317415	157318310	98	-	.	ID=ORF2213.mrna1.exon1;Name=ORF2213;Parent=ORF2213.mrna1;Target=ORF2213 897 2 .
Chr1	stalkie_big_nohaplotig	CDS	157317415	157318308	98	-	0	ID=ORF2213.mrna1.cds1;Name=ORF2213;Parent=ORF2213.mrna1;Target=ORF2213 897 4 .
Chr2	stalkie_big_nohaplotig	mRNA	42987408	42992022	.	-	.	ID=FBgn0033252.1.mrna1;Name=FBgn0033252.1;Parent=FBgn0033252.1.path1;Dir=sensecoverage=99.5;identity=99.4;matches=1888;mismatches=11;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	42991400	42992022	99	-	.	ID=FBgn0033252.1.mrna1.exon1;Name=FBgn0033252.1;Parent=FBgn0033252.1.mrna1;Target=FBgn0033252.1 10 632 +
Chr2	stalkie_big_nohaplotig	exon	42991111	42991329	99	-	.	ID=FBgn0033252.1.mrna1.exon2;Name=FBgn0033252.1;Parent=FBgn0033252.1.mrna1;Target=FBgn0033252.1 633 851 +
Chr2	stalkie_big_nohaplotig	exon	42990750	42991050	99	-	.	ID=FBgn0033252.1.mrna1.exon3;Name=FBgn0033252.1;Parent=FBgn0033252.1.mrna1;Target=FBgn0033252.1 852 1152 +
Chr2	stalkie_big_nohaplotig	exon	42990450	42990680	98	-	.	ID=FBgn0033252.1.mrna1.exon4;Name=FBgn0033252.1;Parent=FBgn0033252.1.mrna1;Target=FBgn0033252.1 1153 1383 +
Chr2	stalkie_big_nohaplotig	exon	42990245	42990385	99	-	.	ID=FBgn0033252.1.mrna1.exon5;Name=FBgn0033252.1;Parent=FBgn0033252.1.mrna1;Target=FBgn0033252.1 1384 1524 +
Chr2	stalkie_big_nohaplotig	exon	42987408	42987791	99	-	.	ID=FBgn0033252.1.mrna1.exon6;Name=FBgn0033252.1;Parent=FBgn0033252.1.mrna1;Target=FBgn0033252.1 1525 1908 +
Chr2	stalkie_big_nohaplotig	CDS	42991400	42992022	99	-	0	ID=FBgn0033252.1.mrna1.cds1;Name=FBgn0033252.1;Parent=FBgn0033252.1.mrna1;Target=FBgn0033252.1 10 632 +
Chr2	stalkie_big_nohaplotig	CDS	42991111	42991329	99	-	2	ID=FBgn0033252.1.mrna1.cds2;Name=FBgn0033252.1;Parent=FBgn0033252.1.mrna1;Target=FBgn0033252.1 633 851 +
Chr2	stalkie_big_nohaplotig	CDS	42990750	42991050	99	-	2	ID=FBgn0033252.1.mrna1.cds3;Name=FBgn0033252.1;Parent=FBgn0033252.1.mrna1;Target=FBgn0033252.1 852 1152 +
Chr2	stalkie_big_nohaplotig	CDS	42990450	42990680	98	-	0	ID=FBgn0033252.1.mrna1.cds4;Name=FBgn0033252.1;Parent=FBgn0033252.1.mrna1;Target=FBgn0033252.1 1153 1383 +
Chr2	stalkie_big_nohaplotig	CDS	42990245	42990385	99	-	0	ID=FBgn0033252.1.mrna1.cds5;Name=FBgn0033252.1;Parent=FBgn0033252.1.mrna1;Target=FBgn0033252.1 1384 1524 +
Chr2	stalkie_big_nohaplotig	CDS	42987408	42987791	99	-	0	ID=FBgn0033252.1.mrna1.cds6;Name=FBgn0033252.1;Parent=FBgn0033252.1.mrna1;Target=FBgn0033252.1 1525 1908 +
Chr1	stalkie_big_nohaplotig	mRNA	147100464	147102284	.	-	.	ID=FBgn0031771.2.mrna1;Name=FBgn0031771.2;Parent=FBgn0031771.2.path1;Dir=indeterminatecoverage=93.6;identity=98.3;matches=1801;mismatches=20;indels=12;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	147100464	147102284	98	-	.	ID=FBgn0031771.2.mrna1.exon1;Name=FBgn0031771.2;Parent=FBgn0031771.2.mrna1;Target=FBgn0031771.2 1959 127 .
Chr1	stalkie_big_nohaplotig	CDS	147100464	147102284	98	-	0	ID=FBgn0031771.2.mrna1.cds1;Name=FBgn0031771.2;Parent=FBgn0031771.2.mrna1;Target=FBgn0031771.2 1959 127 .
ChrX	stalkie_big_nohaplotig	mRNA	7922481	7923786	.	+	.	ID=FBgn0033868.3.mrna2;Name=FBgn0033868.3;Parent=FBgn0033868.3.path2;Dir=sensecoverage=100.0;identity=94.5;matches=961;mismatches=44;indels=12;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	7922481	7922782	100	+	.	ID=FBgn0033868.3.mrna2.exon1;Name=FBgn0033868.3;Parent=FBgn0033868.3.mrna2;Target=FBgn0033868.3 1 302 +
ChrX	stalkie_big_nohaplotig	exon	7922847	7923066	94	+	.	ID=FBgn0033868.3.mrna2.exon2;Name=FBgn0033868.3;Parent=FBgn0033868.3.mrna2;Target=FBgn0033868.3 303 522 +
ChrX	stalkie_big_nohaplotig	exon	7923138	7923387	83	+	.	ID=FBgn0033868.3.mrna2.exon3;Name=FBgn0033868.3;Parent=FBgn0033868.3.mrna2;Target=FBgn0033868.3 523 772 +
ChrX	stalkie_big_nohaplotig	exon	7923446	7923519	98	+	.	ID=FBgn0033868.3.mrna2.exon4;Name=FBgn0033868.3;Parent=FBgn0033868.3.mrna2;Target=FBgn0033868.3 773 846 +
ChrX	stalkie_big_nohaplotig	exon	7923622	7923786	99	+	.	ID=FBgn0033868.3.mrna2.exon5;Name=FBgn0033868.3;Parent=FBgn0033868.3.mrna2;Target=FBgn0033868.3 847 1011 +
ChrX	stalkie_big_nohaplotig	CDS	7922481	7922782	100	+	0	ID=FBgn0033868.3.mrna2.cds1;Name=FBgn0033868.3;Parent=FBgn0033868.3.mrna2;Target=FBgn0033868.3 1 302 +
ChrX	stalkie_big_nohaplotig	CDS	7922847	7923066	94	+	2	ID=FBgn0033868.3.mrna2.cds2;Name=FBgn0033868.3;Parent=FBgn0033868.3.mrna2;Target=FBgn0033868.3 303 522 +
ChrX	stalkie_big_nohaplotig	CDS	7923138	7923387	83	+	0	ID=FBgn0033868.3.mrna2.cds3;Name=FBgn0033868.3;Parent=FBgn0033868.3.mrna2;Target=FBgn0033868.3 523 772 +
ChrX	stalkie_big_nohaplotig	CDS	7923446	7923519	98	+	1	ID=FBgn0033868.3.mrna2.cds4;Name=FBgn0033868.3;Parent=FBgn0033868.3.mrna2;Target=FBgn0033868.3 773 846 +
ChrX	stalkie_big_nohaplotig	CDS	7923622	7923786	99	+	0	ID=FBgn0033868.3.mrna2.cds5;Name=FBgn0033868.3;Parent=FBgn0033868.3.mrna2;Target=FBgn0033868.3 847 1011 +
Chr1	stalkie_big_nohaplotig	mRNA	92963979	92965948	.	-	.	ID=FBgn0032050.1.mrna1;Name=FBgn0032050.1;Parent=FBgn0032050.1.path1;Dir=sensecoverage=99.8;identity=99.9;matches=1646;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	92965131	92965948	100	-	.	ID=FBgn0032050.1.mrna1.exon1;Name=FBgn0032050.1;Parent=FBgn0032050.1.mrna1;Target=FBgn0032050.1 1 818 +
Chr1	stalkie_big_nohaplotig	exon	92964796	92965069	100	-	.	ID=FBgn0032050.1.mrna1.exon2;Name=FBgn0032050.1;Parent=FBgn0032050.1.mrna1;Target=FBgn0032050.1 819 1092 +
Chr1	stalkie_big_nohaplotig	exon	92963979	92964533	99	-	.	ID=FBgn0032050.1.mrna1.exon3;Name=FBgn0032050.1;Parent=FBgn0032050.1.mrna1;Target=FBgn0032050.1 1093 1647 +
Chr1	stalkie_big_nohaplotig	CDS	92965131	92965948	100	-	0	ID=FBgn0032050.1.mrna1.cds1;Name=FBgn0032050.1;Parent=FBgn0032050.1.mrna1;Target=FBgn0032050.1 1 818 +
Chr1	stalkie_big_nohaplotig	CDS	92964796	92965069	100	-	2	ID=FBgn0032050.1.mrna1.cds2;Name=FBgn0032050.1;Parent=FBgn0032050.1.mrna1;Target=FBgn0032050.1 819 1092 +
Chr1	stalkie_big_nohaplotig	CDS	92963979	92964533	99	-	0	ID=FBgn0032050.1.mrna1.cds3;Name=FBgn0032050.1;Parent=FBgn0032050.1.mrna1;Target=FBgn0032050.1 1093 1647 +
Chr1	stalkie_big_nohaplotig	mRNA	6980310	6981253	.	-	.	ID=FBgn0250815.3.mrna1;Name=FBgn0250815.3;Parent=FBgn0250815.3.path1;Dir=sensecoverage=98.5;identity=100.0;matches=860;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	6980953	6981253	100	-	.	ID=FBgn0250815.3.mrna1.exon1;Name=FBgn0250815.3;Parent=FBgn0250815.3.mrna1;Target=FBgn0250815.3 14 314 +
Chr1	stalkie_big_nohaplotig	exon	6980310	6980868	100	-	.	ID=FBgn0250815.3.mrna1.exon2;Name=FBgn0250815.3;Parent=FBgn0250815.3.mrna1;Target=FBgn0250815.3 315 873 +
Chr1	stalkie_big_nohaplotig	CDS	6980953	6981251	100	-	0	ID=FBgn0250815.3.mrna1.cds1;Name=FBgn0250815.3;Parent=FBgn0250815.3.mrna1;Target=FBgn0250815.3 16 314 +
Chr1	stalkie_big_nohaplotig	CDS	6980310	6980868	100	-	2	ID=FBgn0250815.3.mrna1.cds2;Name=FBgn0250815.3;Parent=FBgn0250815.3.mrna1;Target=FBgn0250815.3 315 873 +
Chr1	stalkie_big_nohaplotig	mRNA	128761984	128811076	.	+	.	ID=FBgn0010329.1.mrna1;Name=FBgn0010329.1;Parent=FBgn0010329.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1924;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	128761984	128762176	99	+	.	ID=FBgn0010329.1.mrna1.exon1;Name=FBgn0010329.1;Parent=FBgn0010329.1.mrna1;Target=FBgn0010329.1 1 193 +
Chr1	stalkie_big_nohaplotig	exon	128798219	128798577	99	+	.	ID=FBgn0010329.1.mrna1.exon2;Name=FBgn0010329.1;Parent=FBgn0010329.1.mrna1;Target=FBgn0010329.1 194 552 +
Chr1	stalkie_big_nohaplotig	exon	128798666	128798814	100	+	.	ID=FBgn0010329.1.mrna1.exon3;Name=FBgn0010329.1;Parent=FBgn0010329.1.mrna1;Target=FBgn0010329.1 553 701 +
Chr1	stalkie_big_nohaplotig	exon	128798886	128799277	100	+	.	ID=FBgn0010329.1.mrna1.exon4;Name=FBgn0010329.1;Parent=FBgn0010329.1.mrna1;Target=FBgn0010329.1 702 1093 +
Chr1	stalkie_big_nohaplotig	exon	128806511	128806677	99	+	.	ID=FBgn0010329.1.mrna1.exon5;Name=FBgn0010329.1;Parent=FBgn0010329.1.mrna1;Target=FBgn0010329.1 1094 1260 +
Chr1	stalkie_big_nohaplotig	exon	128806928	128807110	100	+	.	ID=FBgn0010329.1.mrna1.exon6;Name=FBgn0010329.1;Parent=FBgn0010329.1.mrna1;Target=FBgn0010329.1 1261 1443 +
Chr1	stalkie_big_nohaplotig	exon	128808082	128808269	100	+	.	ID=FBgn0010329.1.mrna1.exon7;Name=FBgn0010329.1;Parent=FBgn0010329.1.mrna1;Target=FBgn0010329.1 1444 1631 +
Chr1	stalkie_big_nohaplotig	exon	128810779	128811076	99	+	.	ID=FBgn0010329.1.mrna1.exon8;Name=FBgn0010329.1;Parent=FBgn0010329.1.mrna1;Target=FBgn0010329.1 1632 1929 +
Chr1	stalkie_big_nohaplotig	CDS	128761984	128762176	99	+	0	ID=FBgn0010329.1.mrna1.cds1;Name=FBgn0010329.1;Parent=FBgn0010329.1.mrna1;Target=FBgn0010329.1 1 193 +
Chr1	stalkie_big_nohaplotig	CDS	128798219	128798577	99	+	1	ID=FBgn0010329.1.mrna1.cds2;Name=FBgn0010329.1;Parent=FBgn0010329.1.mrna1;Target=FBgn0010329.1 194 552 +
Chr1	stalkie_big_nohaplotig	CDS	128798666	128798814	100	+	0	ID=FBgn0010329.1.mrna1.cds3;Name=FBgn0010329.1;Parent=FBgn0010329.1.mrna1;Target=FBgn0010329.1 553 701 +
Chr1	stalkie_big_nohaplotig	CDS	128798886	128799277	100	+	2	ID=FBgn0010329.1.mrna1.cds4;Name=FBgn0010329.1;Parent=FBgn0010329.1.mrna1;Target=FBgn0010329.1 702 1093 +
Chr1	stalkie_big_nohaplotig	CDS	128806511	128806677	99	+	1	ID=FBgn0010329.1.mrna1.cds5;Name=FBgn0010329.1;Parent=FBgn0010329.1.mrna1;Target=FBgn0010329.1 1094 1260 +
Chr1	stalkie_big_nohaplotig	CDS	128806928	128807110	100	+	0	ID=FBgn0010329.1.mrna1.cds6;Name=FBgn0010329.1;Parent=FBgn0010329.1.mrna1;Target=FBgn0010329.1 1261 1443 +
Chr1	stalkie_big_nohaplotig	CDS	128808082	128808269	100	+	0	ID=FBgn0010329.1.mrna1.cds7;Name=FBgn0010329.1;Parent=FBgn0010329.1.mrna1;Target=FBgn0010329.1 1444 1631 +
Chr1	stalkie_big_nohaplotig	CDS	128810779	128811076	99	+	2	ID=FBgn0010329.1.mrna1.cds8;Name=FBgn0010329.1;Parent=FBgn0010329.1.mrna1;Target=FBgn0010329.1 1632 1929 +
Chr2	stalkie_big_nohaplotig	mRNA	153866175	153918037	.	+	.	ID=FBgn0013995.3.mrna1;Name=FBgn0013995.3;Parent=FBgn0013995.3.path1;Dir=sensecoverage=100.0;identity=99.7;matches=2717;mismatches=7;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	153866175	153867931	99	+	.	ID=FBgn0013995.3.mrna1.exon1;Name=FBgn0013995.3;Parent=FBgn0013995.3.mrna1;Target=FBgn0013995.3 1 1757 +
Chr2	stalkie_big_nohaplotig	exon	153900358	153900449	100	+	.	ID=FBgn0013995.3.mrna1.exon2;Name=FBgn0013995.3;Parent=FBgn0013995.3.mrna1;Target=FBgn0013995.3 1758 1849 +
Chr2	stalkie_big_nohaplotig	exon	153911653	153911786	100	+	.	ID=FBgn0013995.3.mrna1.exon3;Name=FBgn0013995.3;Parent=FBgn0013995.3.mrna1;Target=FBgn0013995.3 1850 1983 +
Chr2	stalkie_big_nohaplotig	exon	153915905	153916004	100	+	.	ID=FBgn0013995.3.mrna1.exon4;Name=FBgn0013995.3;Parent=FBgn0013995.3.mrna1;Target=FBgn0013995.3 1984 2083 +
Chr2	stalkie_big_nohaplotig	exon	153916095	153916208	99	+	.	ID=FBgn0013995.3.mrna1.exon5;Name=FBgn0013995.3;Parent=FBgn0013995.3.mrna1;Target=FBgn0013995.3 2084 2197 +
Chr2	stalkie_big_nohaplotig	exon	153916743	153916901	100	+	.	ID=FBgn0013995.3.mrna1.exon6;Name=FBgn0013995.3;Parent=FBgn0013995.3.mrna1;Target=FBgn0013995.3 2198 2356 +
Chr2	stalkie_big_nohaplotig	exon	153917546	153917717	100	+	.	ID=FBgn0013995.3.mrna1.exon7;Name=FBgn0013995.3;Parent=FBgn0013995.3.mrna1;Target=FBgn0013995.3 2357 2528 +
Chr2	stalkie_big_nohaplotig	exon	153917842	153918037	100	+	.	ID=FBgn0013995.3.mrna1.exon8;Name=FBgn0013995.3;Parent=FBgn0013995.3.mrna1;Target=FBgn0013995.3 2529 2724 +
Chr2	stalkie_big_nohaplotig	CDS	153866175	153867931	99	+	0	ID=FBgn0013995.3.mrna1.cds1;Name=FBgn0013995.3;Parent=FBgn0013995.3.mrna1;Target=FBgn0013995.3 1 1757 +
Chr2	stalkie_big_nohaplotig	CDS	153900358	153900449	100	+	2	ID=FBgn0013995.3.mrna1.cds2;Name=FBgn0013995.3;Parent=FBgn0013995.3.mrna1;Target=FBgn0013995.3 1758 1849 +
Chr2	stalkie_big_nohaplotig	CDS	153911653	153911786	100	+	1	ID=FBgn0013995.3.mrna1.cds3;Name=FBgn0013995.3;Parent=FBgn0013995.3.mrna1;Target=FBgn0013995.3 1850 1983 +
Chr2	stalkie_big_nohaplotig	CDS	153915905	153916004	100	+	0	ID=FBgn0013995.3.mrna1.cds4;Name=FBgn0013995.3;Parent=FBgn0013995.3.mrna1;Target=FBgn0013995.3 1984 2083 +
Chr2	stalkie_big_nohaplotig	CDS	153916095	153916208	99	+	1	ID=FBgn0013995.3.mrna1.cds5;Name=FBgn0013995.3;Parent=FBgn0013995.3.mrna1;Target=FBgn0013995.3 2084 2197 +
Chr2	stalkie_big_nohaplotig	CDS	153916743	153916901	100	+	1	ID=FBgn0013995.3.mrna1.cds6;Name=FBgn0013995.3;Parent=FBgn0013995.3.mrna1;Target=FBgn0013995.3 2198 2356 +
Chr2	stalkie_big_nohaplotig	CDS	153917546	153917717	100	+	1	ID=FBgn0013995.3.mrna1.cds7;Name=FBgn0013995.3;Parent=FBgn0013995.3.mrna1;Target=FBgn0013995.3 2357 2528 +
Chr2	stalkie_big_nohaplotig	CDS	153917842	153918037	100	+	2	ID=FBgn0013995.3.mrna1.cds8;Name=FBgn0013995.3;Parent=FBgn0013995.3.mrna1;Target=FBgn0013995.3 2529 2724 +
Chr1	stalkie_big_nohaplotig	mRNA	134851302	134853284	.	+	.	ID=FBgn0030766.1.mrna1;Name=FBgn0030766.1;Parent=FBgn0030766.1.path1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1978;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	134851302	134853284	99	+	.	ID=FBgn0030766.1.mrna1.exon1;Name=FBgn0030766.1;Parent=FBgn0030766.1.mrna1;Target=FBgn0030766.1 1983 1 .
Chr1	stalkie_big_nohaplotig	CDS	134851302	134853284	99	+	0	ID=FBgn0030766.1.mrna1.cds1;Name=FBgn0030766.1;Parent=FBgn0030766.1.mrna1;Target=FBgn0030766.1 1983 1 .
Chr1	stalkie_big_nohaplotig	mRNA	134885650	134892211	.	-	.	ID=FBgn0029804.1.mrna1;Name=FBgn0029804.1;Parent=FBgn0029804.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1422;mismatches=6;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	134891893	134892211	99	-	.	ID=FBgn0029804.1.mrna1.exon1;Name=FBgn0029804.1;Parent=FBgn0029804.1.mrna1;Target=FBgn0029804.1 1 319 +
Chr1	stalkie_big_nohaplotig	exon	134891614	134891808	100	-	.	ID=FBgn0029804.1.mrna1.exon2;Name=FBgn0029804.1;Parent=FBgn0029804.1.mrna1;Target=FBgn0029804.1 320 514 +
Chr1	stalkie_big_nohaplotig	exon	134891274	134891427	98	-	.	ID=FBgn0029804.1.mrna1.exon3;Name=FBgn0029804.1;Parent=FBgn0029804.1.mrna1;Target=FBgn0029804.1 515 668 +
Chr1	stalkie_big_nohaplotig	exon	134885650	134886409	99	-	.	ID=FBgn0029804.1.mrna1.exon4;Name=FBgn0029804.1;Parent=FBgn0029804.1.mrna1;Target=FBgn0029804.1 669 1428 +
Chr1	stalkie_big_nohaplotig	CDS	134891893	134892211	99	-	0	ID=FBgn0029804.1.mrna1.cds1;Name=FBgn0029804.1;Parent=FBgn0029804.1.mrna1;Target=FBgn0029804.1 1 319 +
Chr1	stalkie_big_nohaplotig	CDS	134891614	134891808	100	-	1	ID=FBgn0029804.1.mrna1.cds2;Name=FBgn0029804.1;Parent=FBgn0029804.1.mrna1;Target=FBgn0029804.1 320 514 +
Chr1	stalkie_big_nohaplotig	CDS	134891274	134891427	98	-	1	ID=FBgn0029804.1.mrna1.cds3;Name=FBgn0029804.1;Parent=FBgn0029804.1.mrna1;Target=FBgn0029804.1 515 668 +
Chr1	stalkie_big_nohaplotig	CDS	134885650	134886409	99	-	2	ID=FBgn0029804.1.mrna1.cds4;Name=FBgn0029804.1;Parent=FBgn0029804.1.mrna1;Target=FBgn0029804.1 669 1428 +
Chr1	stalkie_big_nohaplotig	mRNA	134877701	134879542	.	-	.	ID=FBgn0030945.1.mrna1;Name=FBgn0030945.1;Parent=FBgn0030945.1.path1;Dir=sensecoverage=99.9;identity=99.2;matches=1537;mismatches=12;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	134879499	134879542	95	-	.	ID=FBgn0030945.1.mrna1.exon1;Name=FBgn0030945.1;Parent=FBgn0030945.1.mrna1;Target=FBgn0030945.1 3 46 +
Chr1	stalkie_big_nohaplotig	exon	134879265	134879336	100	-	.	ID=FBgn0030945.1.mrna1.exon2;Name=FBgn0030945.1;Parent=FBgn0030945.1.mrna1;Target=FBgn0030945.1 47 118 +
Chr1	stalkie_big_nohaplotig	exon	134878298	134879195	99	-	.	ID=FBgn0030945.1.mrna1.exon3;Name=FBgn0030945.1;Parent=FBgn0030945.1.mrna1;Target=FBgn0030945.1 119 1016 +
Chr1	stalkie_big_nohaplotig	exon	134877701	134878235	99	-	.	ID=FBgn0030945.1.mrna1.exon4;Name=FBgn0030945.1;Parent=FBgn0030945.1.mrna1;Target=FBgn0030945.1 1017 1551 +
Chr1	stalkie_big_nohaplotig	CDS	134879499	134879541	95	-	0	ID=FBgn0030945.1.mrna1.cds1;Name=FBgn0030945.1;Parent=FBgn0030945.1.mrna1;Target=FBgn0030945.1 4 46 +
Chr1	stalkie_big_nohaplotig	CDS	134879265	134879336	100	-	1	ID=FBgn0030945.1.mrna1.cds2;Name=FBgn0030945.1;Parent=FBgn0030945.1.mrna1;Target=FBgn0030945.1 47 118 +
Chr1	stalkie_big_nohaplotig	CDS	134878298	134879195	99	-	1	ID=FBgn0030945.1.mrna1.cds3;Name=FBgn0030945.1;Parent=FBgn0030945.1.mrna1;Target=FBgn0030945.1 119 1016 +
Chr1	stalkie_big_nohaplotig	CDS	134877701	134878235	99	-	2	ID=FBgn0030945.1.mrna1.cds4;Name=FBgn0030945.1;Parent=FBgn0030945.1.mrna1;Target=FBgn0030945.1 1017 1551 +
Chr2	stalkie_big_nohaplotig	mRNA	29716778	29718123	.	+	.	ID=FBgn0050101.1.mrna1;Name=FBgn0050101.1;Parent=FBgn0050101.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=1054;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	29716778	29716837	100	+	.	ID=FBgn0050101.1.mrna1.exon1;Name=FBgn0050101.1;Parent=FBgn0050101.1.mrna1;Target=FBgn0050101.1 1 60 +
Chr2	stalkie_big_nohaplotig	exon	29717125	29718123	99	+	.	ID=FBgn0050101.1.mrna1.exon2;Name=FBgn0050101.1;Parent=FBgn0050101.1.mrna1;Target=FBgn0050101.1 61 1059 +
Chr2	stalkie_big_nohaplotig	CDS	29716778	29716837	100	+	0	ID=FBgn0050101.1.mrna1.cds1;Name=FBgn0050101.1;Parent=FBgn0050101.1.mrna1;Target=FBgn0050101.1 1 60 +
Chr2	stalkie_big_nohaplotig	CDS	29717125	29718123	99	+	0	ID=FBgn0050101.1.mrna1.cds2;Name=FBgn0050101.1;Parent=FBgn0050101.1.mrna1;Target=FBgn0050101.1 61 1059 +
Chr1	stalkie_big_nohaplotig	mRNA	39631879	39632556	.	-	.	ID=FBgn0001226.1.mrna1;Name=FBgn0001226.1;Parent=FBgn0001226.1.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=678;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	39631879	39632556	100	-	.	ID=FBgn0001226.1.mrna1.exon1;Name=FBgn0001226.1;Parent=FBgn0001226.1.mrna1;Target=FBgn0001226.1 678 1 .
Chr1	stalkie_big_nohaplotig	CDS	39631879	39632556	100	-	0	ID=FBgn0001226.1.mrna1.cds1;Name=FBgn0001226.1;Parent=FBgn0001226.1.mrna1;Target=FBgn0001226.1 678 1 .
Chr1	stalkie_big_nohaplotig	mRNA	39570476	39571323	.	-	.	ID=FBgn0038928.1.mrna1;Name=FBgn0038928.1;Parent=FBgn0038928.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=789;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	39571083	39571323	100	-	.	ID=FBgn0038928.1.mrna1.exon1;Name=FBgn0038928.1;Parent=FBgn0038928.1.mrna1;Target=FBgn0038928.1 1 241 +
Chr1	stalkie_big_nohaplotig	exon	39570476	39571023	100	-	.	ID=FBgn0038928.1.mrna1.exon2;Name=FBgn0038928.1;Parent=FBgn0038928.1.mrna1;Target=FBgn0038928.1 242 789 +
Chr1	stalkie_big_nohaplotig	CDS	39571083	39571323	100	-	0	ID=FBgn0038928.1.mrna1.cds1;Name=FBgn0038928.1;Parent=FBgn0038928.1.mrna1;Target=FBgn0038928.1 1 241 +
Chr1	stalkie_big_nohaplotig	CDS	39570476	39571023	100	-	1	ID=FBgn0038928.1.mrna1.cds2;Name=FBgn0038928.1;Parent=FBgn0038928.1.mrna1;Target=FBgn0038928.1 242 789 +
Chr1	stalkie_big_nohaplotig	mRNA	107171359	107205738	.	-	.	ID=FBgn0260970.1.mrna1;Name=FBgn0260970.1;Parent=FBgn0260970.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=6313;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	107205273	107205738	100	-	.	ID=FBgn0260970.1.mrna1.exon1;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 1 466 +
Chr1	stalkie_big_nohaplotig	exon	107196600	107197072	99	-	.	ID=FBgn0260970.1.mrna1.exon2;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 467 939 +
Chr1	stalkie_big_nohaplotig	exon	107196265	107196528	100	-	.	ID=FBgn0260970.1.mrna1.exon3;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 940 1203 +
Chr1	stalkie_big_nohaplotig	exon	107195980	107196208	100	-	.	ID=FBgn0260970.1.mrna1.exon4;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 1204 1432 +
Chr1	stalkie_big_nohaplotig	exon	107195486	107195898	100	-	.	ID=FBgn0260970.1.mrna1.exon5;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 1433 1845 +
Chr1	stalkie_big_nohaplotig	exon	107194814	107194969	100	-	.	ID=FBgn0260970.1.mrna1.exon6;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 1846 2001 +
Chr1	stalkie_big_nohaplotig	exon	107173296	107176094	100	-	.	ID=FBgn0260970.1.mrna1.exon7;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 2002 4800 +
Chr1	stalkie_big_nohaplotig	exon	107172794	107173217	100	-	.	ID=FBgn0260970.1.mrna1.exon8;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 4801 5224 +
Chr1	stalkie_big_nohaplotig	exon	107172010	107172716	99	-	.	ID=FBgn0260970.1.mrna1.exon9;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 5225 5931 +
Chr1	stalkie_big_nohaplotig	exon	107171809	107171940	100	-	.	ID=FBgn0260970.1.mrna1.exon10;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 5932 6063 +
Chr1	stalkie_big_nohaplotig	exon	107171528	107171667	100	-	.	ID=FBgn0260970.1.mrna1.exon11;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 6064 6203 +
Chr1	stalkie_big_nohaplotig	exon	107171359	107171473	99	-	.	ID=FBgn0260970.1.mrna1.exon12;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 6204 6318 +
Chr1	stalkie_big_nohaplotig	CDS	107205273	107205738	100	-	0	ID=FBgn0260970.1.mrna1.cds1;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 1 466 +
Chr1	stalkie_big_nohaplotig	CDS	107196600	107197072	99	-	1	ID=FBgn0260970.1.mrna1.cds2;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 467 939 +
Chr1	stalkie_big_nohaplotig	CDS	107196265	107196528	100	-	0	ID=FBgn0260970.1.mrna1.cds3;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 940 1203 +
Chr1	stalkie_big_nohaplotig	CDS	107195980	107196208	100	-	0	ID=FBgn0260970.1.mrna1.cds4;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 1204 1432 +
Chr1	stalkie_big_nohaplotig	CDS	107195486	107195898	100	-	1	ID=FBgn0260970.1.mrna1.cds5;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 1433 1845 +
Chr1	stalkie_big_nohaplotig	CDS	107194814	107194969	100	-	0	ID=FBgn0260970.1.mrna1.cds6;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 1846 2001 +
Chr1	stalkie_big_nohaplotig	CDS	107173296	107176094	100	-	0	ID=FBgn0260970.1.mrna1.cds7;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 2002 4800 +
Chr1	stalkie_big_nohaplotig	CDS	107172794	107173217	100	-	0	ID=FBgn0260970.1.mrna1.cds8;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 4801 5224 +
Chr1	stalkie_big_nohaplotig	CDS	107172010	107172716	99	-	1	ID=FBgn0260970.1.mrna1.cds9;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 5225 5931 +
Chr1	stalkie_big_nohaplotig	CDS	107171809	107171940	100	-	0	ID=FBgn0260970.1.mrna1.cds10;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 5932 6063 +
Chr1	stalkie_big_nohaplotig	CDS	107171528	107171667	100	-	0	ID=FBgn0260970.1.mrna1.cds11;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 6064 6203 +
Chr1	stalkie_big_nohaplotig	CDS	107171359	107171473	99	-	2	ID=FBgn0260970.1.mrna1.cds12;Name=FBgn0260970.1;Parent=FBgn0260970.1.mrna1;Target=FBgn0260970.1 6204 6318 +
Chr1	stalkie_big_nohaplotig	mRNA	171802852	171859962	.	+	.	ID=FBgn0035170.1.mrna1;Name=FBgn0035170.1;Parent=FBgn0035170.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1719;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	171802852	171803293	99	+	.	ID=FBgn0035170.1.mrna1.exon1;Name=FBgn0035170.1;Parent=FBgn0035170.1.mrna1;Target=FBgn0035170.1 1 442 +
Chr1	stalkie_big_nohaplotig	exon	171848002	171848500	100	+	.	ID=FBgn0035170.1.mrna1.exon2;Name=FBgn0035170.1;Parent=FBgn0035170.1.mrna1;Target=FBgn0035170.1 443 941 +
Chr1	stalkie_big_nohaplotig	exon	171855866	171855980	100	+	.	ID=FBgn0035170.1.mrna1.exon3;Name=FBgn0035170.1;Parent=FBgn0035170.1.mrna1;Target=FBgn0035170.1 942 1056 +
Chr1	stalkie_big_nohaplotig	exon	171856541	171856763	100	+	.	ID=FBgn0035170.1.mrna1.exon4;Name=FBgn0035170.1;Parent=FBgn0035170.1.mrna1;Target=FBgn0035170.1 1057 1279 +
Chr1	stalkie_big_nohaplotig	exon	171856945	171857122	100	+	.	ID=FBgn0035170.1.mrna1.exon5;Name=FBgn0035170.1;Parent=FBgn0035170.1.mrna1;Target=FBgn0035170.1 1280 1457 +
Chr1	stalkie_big_nohaplotig	exon	171857244	171857380	99	+	.	ID=FBgn0035170.1.mrna1.exon6;Name=FBgn0035170.1;Parent=FBgn0035170.1.mrna1;Target=FBgn0035170.1 1458 1594 +
Chr1	stalkie_big_nohaplotig	exon	171859835	171859962	100	+	.	ID=FBgn0035170.1.mrna1.exon7;Name=FBgn0035170.1;Parent=FBgn0035170.1.mrna1;Target=FBgn0035170.1 1595 1722 +
Chr1	stalkie_big_nohaplotig	CDS	171802852	171803293	99	+	0	ID=FBgn0035170.1.mrna1.cds1;Name=FBgn0035170.1;Parent=FBgn0035170.1.mrna1;Target=FBgn0035170.1 1 442 +
Chr1	stalkie_big_nohaplotig	CDS	171848002	171848500	100	+	1	ID=FBgn0035170.1.mrna1.cds2;Name=FBgn0035170.1;Parent=FBgn0035170.1.mrna1;Target=FBgn0035170.1 443 941 +
Chr1	stalkie_big_nohaplotig	CDS	171855866	171855980	100	+	2	ID=FBgn0035170.1.mrna1.cds3;Name=FBgn0035170.1;Parent=FBgn0035170.1.mrna1;Target=FBgn0035170.1 942 1056 +
Chr1	stalkie_big_nohaplotig	CDS	171856541	171856763	100	+	0	ID=FBgn0035170.1.mrna1.cds4;Name=FBgn0035170.1;Parent=FBgn0035170.1.mrna1;Target=FBgn0035170.1 1057 1279 +
Chr1	stalkie_big_nohaplotig	CDS	171856945	171857122	100	+	1	ID=FBgn0035170.1.mrna1.cds5;Name=FBgn0035170.1;Parent=FBgn0035170.1.mrna1;Target=FBgn0035170.1 1280 1457 +
Chr1	stalkie_big_nohaplotig	CDS	171857244	171857380	99	+	2	ID=FBgn0035170.1.mrna1.cds6;Name=FBgn0035170.1;Parent=FBgn0035170.1.mrna1;Target=FBgn0035170.1 1458 1594 +
Chr1	stalkie_big_nohaplotig	CDS	171859835	171859962	100	+	1	ID=FBgn0035170.1.mrna1.cds7;Name=FBgn0035170.1;Parent=FBgn0035170.1.mrna1;Target=FBgn0035170.1 1595 1722 +
Chr2	stalkie_big_nohaplotig	mRNA	43188161	43190546	.	+	.	ID=FBgn0034406.1.mrna1;Name=FBgn0034406.1;Parent=FBgn0034406.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=1198;mismatches=7;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	43188161	43188174	93	+	.	ID=FBgn0034406.1.mrna1.exon1;Name=FBgn0034406.1;Parent=FBgn0034406.1.mrna1;Target=FBgn0034406.1 1 15 +
Chr2	stalkie_big_nohaplotig	exon	43188241	43188440	99	+	.	ID=FBgn0034406.1.mrna1.exon2;Name=FBgn0034406.1;Parent=FBgn0034406.1.mrna1;Target=FBgn0034406.1 16 215 +
Chr2	stalkie_big_nohaplotig	exon	43189499	43189703	99	+	.	ID=FBgn0034406.1.mrna1.exon3;Name=FBgn0034406.1;Parent=FBgn0034406.1.mrna1;Target=FBgn0034406.1 216 420 +
Chr2	stalkie_big_nohaplotig	exon	43189761	43190546	99	+	.	ID=FBgn0034406.1.mrna1.exon4;Name=FBgn0034406.1;Parent=FBgn0034406.1.mrna1;Target=FBgn0034406.1 421 1206 +
Chr2	stalkie_big_nohaplotig	CDS	43188163	43188174	92	+	0	ID=FBgn0034406.1.mrna1.cds1;Name=FBgn0034406.1;Parent=FBgn0034406.1.mrna1;Target=FBgn0034406.1 3 15 +
Chr2	stalkie_big_nohaplotig	CDS	43188241	43188281	100	+	1	ID=FBgn0034406.1.mrna1.cds2;Name=FBgn0034406.1;Parent=FBgn0034406.1.mrna1;Target=FBgn0034406.1 16 56 +
Chr2	stalkie_big_nohaplotig	mRNA	79142759	79144311	.	-	.	ID=ORF659.mrna1;Name=ORF659;Parent=ORF659.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1552;mismatches=1;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	79142759	79144311	99	-	.	ID=ORF659.mrna1.exon1;Name=ORF659;Parent=ORF659.mrna1;Target=ORF659 1554 1 .
Chr2	stalkie_big_nohaplotig	CDS	79144206	79144309	99	-	0	ID=ORF659.mrna1.cds1;Name=ORF659;Parent=ORF659.mrna1;Target=ORF659 107 3 .
Chr1	stalkie_big_nohaplotig	mRNA	44293795	44295346	.	+	.	ID=ORF659.mrna4;Name=ORF659;Parent=ORF659.path4;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1551;mismatches=1;indels=2;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	44293795	44295346	99	+	.	ID=ORF659.mrna4.exon1;Name=ORF659;Parent=ORF659.mrna4;Target=ORF659 1554 1 .
Chr1	stalkie_big_nohaplotig	CDS	44293797	44293900	99	+	0	ID=ORF659.mrna4.cds1;Name=ORF659;Parent=ORF659.mrna4;Target=ORF659 107 3 .
Chr1	stalkie_big_nohaplotig	mRNA	169445621	169447172	.	+	.	ID=ORF659.mrna5;Name=ORF659;Parent=ORF659.path5;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1551;mismatches=1;indels=2;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	169445621	169447172	99	+	.	ID=ORF659.mrna5.exon1;Name=ORF659;Parent=ORF659.mrna5;Target=ORF659 1554 1 .
Chr1	stalkie_big_nohaplotig	CDS	169445623	169445726	99	+	0	ID=ORF659.mrna5.cds1;Name=ORF659;Parent=ORF659.mrna5;Target=ORF659 107 3 .
Chr2	stalkie_big_nohaplotig	mRNA	95482400	95483951	.	+	.	ID=ORF659.mrna8;Name=ORF659;Parent=ORF659.path8;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1551;mismatches=1;indels=2;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	95482400	95483951	99	+	.	ID=ORF659.mrna8.exon1;Name=ORF659;Parent=ORF659.mrna8;Target=ORF659 1554 1 .
Chr2	stalkie_big_nohaplotig	CDS	95482402	95482505	99	+	0	ID=ORF659.mrna8.cds1;Name=ORF659;Parent=ORF659.mrna8;Target=ORF659 107 3 .
Chr1	stalkie_big_nohaplotig	mRNA	35654319	35655870	.	+	.	ID=ORF659.mrna9;Name=ORF659;Parent=ORF659.path9;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1550;mismatches=2;indels=2;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	35654319	35655870	99	+	.	ID=ORF659.mrna9.exon1;Name=ORF659;Parent=ORF659.mrna9;Target=ORF659 1554 1 .
Chr1	stalkie_big_nohaplotig	CDS	35654321	35654424	99	+	0	ID=ORF659.mrna9.cds1;Name=ORF659;Parent=ORF659.mrna9;Target=ORF659 107 3 .
ChrX	stalkie_big_nohaplotig	mRNA	62877262	62878813	.	+	.	ID=ORF659.mrna10;Name=ORF659;Parent=ORF659.path10;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1550;mismatches=2;indels=2;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	62877262	62878813	99	+	.	ID=ORF659.mrna10.exon1;Name=ORF659;Parent=ORF659.mrna10;Target=ORF659 1554 1 .
ChrX	stalkie_big_nohaplotig	CDS	62877264	62877367	99	+	0	ID=ORF659.mrna10.cds1;Name=ORF659;Parent=ORF659.mrna10;Target=ORF659 107 3 .
Chr2	stalkie_big_nohaplotig	mRNA	79049773	79165638	.	+	.	ID=FBgn0051176.1.mrna1;Name=FBgn0051176.1;Parent=FBgn0051176.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1645;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	79049773	79051031	100	+	.	ID=FBgn0051176.1.mrna1.exon1;Name=FBgn0051176.1;Parent=FBgn0051176.1.mrna1;Target=FBgn0051176.1 1 1259 +
Chr2	stalkie_big_nohaplotig	exon	79165251	79165638	99	+	.	ID=FBgn0051176.1.mrna1.exon2;Name=FBgn0051176.1;Parent=FBgn0051176.1.mrna1;Target=FBgn0051176.1 1260 1647 +
Chr2	stalkie_big_nohaplotig	CDS	79049773	79051031	100	+	0	ID=FBgn0051176.1.mrna1.cds1;Name=FBgn0051176.1;Parent=FBgn0051176.1.mrna1;Target=FBgn0051176.1 1 1259 +
Chr2	stalkie_big_nohaplotig	CDS	79165251	79165638	99	+	2	ID=FBgn0051176.1.mrna1.cds2;Name=FBgn0051176.1;Parent=FBgn0051176.1.mrna1;Target=FBgn0051176.1 1260 1647 +
Chr2	stalkie_big_nohaplotig	mRNA	140231541	140232329	.	+	.	ID=ORF2913.mrna1;Name=ORF2913;Parent=ORF2913.path1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=786;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	140231541	140232329	99	+	.	ID=ORF2913.mrna1.exon1;Name=ORF2913;Parent=ORF2913.mrna1;Target=ORF2913 789 1 .
Chr2	stalkie_big_nohaplotig	CDS	140231541	140232329	99	+	0	ID=ORF2913.mrna1.cds1;Name=ORF2913;Parent=ORF2913.mrna1;Target=ORF2913 789 1 .
Chr1	stalkie_big_nohaplotig	mRNA	24565500	24567219	.	-	.	ID=FBgn0035431.1.mrna1;Name=FBgn0035431.1;Parent=FBgn0035431.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=609;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	24567112	24567219	100	-	.	ID=FBgn0035431.1.mrna1.exon1;Name=FBgn0035431.1;Parent=FBgn0035431.1.mrna1;Target=FBgn0035431.1 1 108 +
Chr1	stalkie_big_nohaplotig	exon	24565500	24566000	100	-	.	ID=FBgn0035431.1.mrna1.exon2;Name=FBgn0035431.1;Parent=FBgn0035431.1.mrna1;Target=FBgn0035431.1 109 609 +
Chr1	stalkie_big_nohaplotig	CDS	24567112	24567219	100	-	0	ID=FBgn0035431.1.mrna1.cds1;Name=FBgn0035431.1;Parent=FBgn0035431.1.mrna1;Target=FBgn0035431.1 1 108 +
Chr1	stalkie_big_nohaplotig	CDS	24565500	24566000	100	-	0	ID=FBgn0035431.1.mrna1.cds2;Name=FBgn0035431.1;Parent=FBgn0035431.1.mrna1;Target=FBgn0035431.1 109 609 +
Chr2	stalkie_big_nohaplotig	mRNA	135369797	135371948	.	-	.	ID=FBgn0038639.1.mrna1;Name=FBgn0038639.1;Parent=FBgn0038639.1.path1;Dir=sensecoverage=99.5;identity=98.6;matches=1882;mismatches=24;indels=2;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	135371896	135371948	98	-	.	ID=FBgn0038639.1.mrna1.exon1;Name=FBgn0038639.1;Parent=FBgn0038639.1.mrna1;Target=FBgn0038639.1 11 63 +
Chr2	stalkie_big_nohaplotig	exon	135371319	135371776	97	-	.	ID=FBgn0038639.1.mrna1.exon2;Name=FBgn0038639.1;Parent=FBgn0038639.1.mrna1;Target=FBgn0038639.1 64 521 +
Chr2	stalkie_big_nohaplotig	exon	135371047	135371248	99	-	.	ID=FBgn0038639.1.mrna1.exon3;Name=FBgn0038639.1;Parent=FBgn0038639.1.mrna1;Target=FBgn0038639.1 522 723 +
Chr2	stalkie_big_nohaplotig	exon	135369797	135370990	98	-	.	ID=FBgn0038639.1.mrna1.exon4;Name=FBgn0038639.1;Parent=FBgn0038639.1.mrna1;Target=FBgn0038639.1 724 1917 +
Chr2	stalkie_big_nohaplotig	CDS	135371896	135371946	98	-	0	ID=FBgn0038639.1.mrna1.cds1;Name=FBgn0038639.1;Parent=FBgn0038639.1.mrna1;Target=FBgn0038639.1 13 63 +
Chr2	stalkie_big_nohaplotig	CDS	135371319	135371776	97	-	0	ID=FBgn0038639.1.mrna1.cds2;Name=FBgn0038639.1;Parent=FBgn0038639.1.mrna1;Target=FBgn0038639.1 64 521 +
Chr2	stalkie_big_nohaplotig	CDS	135371047	135371248	99	-	2	ID=FBgn0038639.1.mrna1.cds3;Name=FBgn0038639.1;Parent=FBgn0038639.1.mrna1;Target=FBgn0038639.1 522 723 +
Chr2	stalkie_big_nohaplotig	CDS	135369797	135370990	98	-	0	ID=FBgn0038639.1.mrna1.cds4;Name=FBgn0038639.1;Parent=FBgn0038639.1.mrna1;Target=FBgn0038639.1 724 1917 +
Chr1	stalkie_big_nohaplotig	mRNA	107945509	107946752	.	-	.	ID=FBgn0042650.mrna1;Name=FBgn0042650;Parent=FBgn0042650.path1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1243;mismatches=1;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	107945509	107946752	99	-	.	ID=FBgn0042650.mrna1.exon1;Name=FBgn0042650;Parent=FBgn0042650.mrna1;Target=FBgn0042650 1245 1 .
Chr1	stalkie_big_nohaplotig	CDS	107946650	107946750	99	-	0	ID=FBgn0042650.mrna1.cds1;Name=FBgn0042650;Parent=FBgn0042650.mrna1;Target=FBgn0042650 104 3 .
Chr2	stalkie_big_nohaplotig	mRNA	5408511	5411748	.	-	.	ID=FBgn0000079.1.mrna1;Name=FBgn0000079.1;Parent=FBgn0000079.1.path1;Dir=sensecoverage=100.0;identity=98.7;matches=1958;mismatches=7;indels=18;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	5411092	5411748	99	-	.	ID=FBgn0000079.1.mrna1.exon1;Name=FBgn0000079.1;Parent=FBgn0000079.1.mrna1;Target=FBgn0000079.1 1 657 +
Chr2	stalkie_big_nohaplotig	exon	5410865	5410977	99	-	.	ID=FBgn0000079.1.mrna1.exon2;Name=FBgn0000079.1;Parent=FBgn0000079.1.mrna1;Target=FBgn0000079.1 658 770 +
Chr2	stalkie_big_nohaplotig	exon	5408511	5409711	98	-	.	ID=FBgn0000079.1.mrna1.exon3;Name=FBgn0000079.1;Parent=FBgn0000079.1.mrna1;Target=FBgn0000079.1 771 1977 +
Chr2	stalkie_big_nohaplotig	CDS	5411092	5411748	99	-	0	ID=FBgn0000079.1.mrna1.cds1;Name=FBgn0000079.1;Parent=FBgn0000079.1.mrna1;Target=FBgn0000079.1 1 657 +
Chr2	stalkie_big_nohaplotig	CDS	5410865	5410977	99	-	0	ID=FBgn0000079.1.mrna1.cds2;Name=FBgn0000079.1;Parent=FBgn0000079.1.mrna1;Target=FBgn0000079.1 658 770 +
Chr2	stalkie_big_nohaplotig	CDS	5408511	5409711	98	-	2	ID=FBgn0000079.1.mrna1.cds3;Name=FBgn0000079.1;Parent=FBgn0000079.1.mrna1;Target=FBgn0000079.1 771 1977 +
Chr2	stalkie_big_nohaplotig	mRNA	5426821	5427758	.	-	.	ID=FBgn0033446.1.mrna1;Name=FBgn0033446.1;Parent=FBgn0033446.1.path1;Dir=sensecoverage=94.4;identity=99.6;matches=665;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	5427576	5427758	98	-	.	ID=FBgn0033446.1.mrna1.exon1;Name=FBgn0033446.1;Parent=FBgn0033446.1.mrna1;Target=FBgn0033446.1 41 223 +
Chr2	stalkie_big_nohaplotig	exon	5427254	5427444	100	-	.	ID=FBgn0033446.1.mrna1.exon2;Name=FBgn0033446.1;Parent=FBgn0033446.1.mrna1;Target=FBgn0033446.1 224 414 +
Chr2	stalkie_big_nohaplotig	exon	5426987	5427196	100	-	.	ID=FBgn0033446.1.mrna1.exon3;Name=FBgn0033446.1;Parent=FBgn0033446.1.mrna1;Target=FBgn0033446.1 415 624 +
Chr2	stalkie_big_nohaplotig	exon	5426821	5426904	100	-	.	ID=FBgn0033446.1.mrna1.exon4;Name=FBgn0033446.1;Parent=FBgn0033446.1.mrna1;Target=FBgn0033446.1 625 708 +
Chr2	stalkie_big_nohaplotig	CDS	5427576	5427756	98	-	0	ID=FBgn0033446.1.mrna1.cds1;Name=FBgn0033446.1;Parent=FBgn0033446.1.mrna1;Target=FBgn0033446.1 43 223 +
Chr2	stalkie_big_nohaplotig	CDS	5427254	5427444	100	-	1	ID=FBgn0033446.1.mrna1.cds2;Name=FBgn0033446.1;Parent=FBgn0033446.1.mrna1;Target=FBgn0033446.1 224 414 +
Chr2	stalkie_big_nohaplotig	CDS	5426987	5427196	100	-	0	ID=FBgn0033446.1.mrna1.cds3;Name=FBgn0033446.1;Parent=FBgn0033446.1.mrna1;Target=FBgn0033446.1 415 624 +
Chr2	stalkie_big_nohaplotig	CDS	5426821	5426904	100	-	0	ID=FBgn0033446.1.mrna1.cds4;Name=FBgn0033446.1;Parent=FBgn0033446.1.mrna1;Target=FBgn0033446.1 625 708 +
Chr2	stalkie_big_nohaplotig	mRNA	149101502	149105604	.	-	.	ID=FBgn0037548.1.mrna1;Name=FBgn0037548.1;Parent=FBgn0037548.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1580;mismatches=7;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	149105419	149105604	98	-	.	ID=FBgn0037548.1.mrna1.exon1;Name=FBgn0037548.1;Parent=FBgn0037548.1.mrna1;Target=FBgn0037548.1 1 186 +
Chr2	stalkie_big_nohaplotig	exon	149102885	149103107	99	-	.	ID=FBgn0037548.1.mrna1.exon2;Name=FBgn0037548.1;Parent=FBgn0037548.1.mrna1;Target=FBgn0037548.1 187 409 +
Chr2	stalkie_big_nohaplotig	exon	149102301	149102809	99	-	.	ID=FBgn0037548.1.mrna1.exon3;Name=FBgn0037548.1;Parent=FBgn0037548.1.mrna1;Target=FBgn0037548.1 410 918 +
Chr2	stalkie_big_nohaplotig	exon	149101844	149102236	100	-	.	ID=FBgn0037548.1.mrna1.exon4;Name=FBgn0037548.1;Parent=FBgn0037548.1.mrna1;Target=FBgn0037548.1 919 1311 +
Chr2	stalkie_big_nohaplotig	exon	149101502	149101777	99	-	.	ID=FBgn0037548.1.mrna1.exon5;Name=FBgn0037548.1;Parent=FBgn0037548.1.mrna1;Target=FBgn0037548.1 1312 1587 +
Chr2	stalkie_big_nohaplotig	CDS	149105419	149105604	98	-	0	ID=FBgn0037548.1.mrna1.cds1;Name=FBgn0037548.1;Parent=FBgn0037548.1.mrna1;Target=FBgn0037548.1 1 186 +
Chr2	stalkie_big_nohaplotig	CDS	149102885	149103107	99	-	0	ID=FBgn0037548.1.mrna1.cds2;Name=FBgn0037548.1;Parent=FBgn0037548.1.mrna1;Target=FBgn0037548.1 187 409 +
Chr2	stalkie_big_nohaplotig	CDS	149102301	149102809	99	-	1	ID=FBgn0037548.1.mrna1.cds3;Name=FBgn0037548.1;Parent=FBgn0037548.1.mrna1;Target=FBgn0037548.1 410 918 +
Chr2	stalkie_big_nohaplotig	CDS	149101844	149102236	100	-	0	ID=FBgn0037548.1.mrna1.cds4;Name=FBgn0037548.1;Parent=FBgn0037548.1.mrna1;Target=FBgn0037548.1 919 1311 +
Chr2	stalkie_big_nohaplotig	CDS	149101502	149101777	99	-	0	ID=FBgn0037548.1.mrna1.cds5;Name=FBgn0037548.1;Parent=FBgn0037548.1.mrna1;Target=FBgn0037548.1 1312 1587 +
Chr2	stalkie_big_nohaplotig	mRNA	10914772	10917188	.	-	.	ID=FBgn0040660.1.mrna1;Name=FBgn0040660.1;Parent=FBgn0040660.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=321;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	10917139	10917188	100	-	.	ID=FBgn0040660.1.mrna1.exon1;Name=FBgn0040660.1;Parent=FBgn0040660.1.mrna1;Target=FBgn0040660.1 1 50 +
Chr2	stalkie_big_nohaplotig	exon	10916635	10916779	100	-	.	ID=FBgn0040660.1.mrna1.exon2;Name=FBgn0040660.1;Parent=FBgn0040660.1.mrna1;Target=FBgn0040660.1 51 195 +
Chr2	stalkie_big_nohaplotig	exon	10914772	10914897	100	-	.	ID=FBgn0040660.1.mrna1.exon3;Name=FBgn0040660.1;Parent=FBgn0040660.1.mrna1;Target=FBgn0040660.1 196 321 +
Chr2	stalkie_big_nohaplotig	CDS	10917139	10917188	100	-	0	ID=FBgn0040660.1.mrna1.cds1;Name=FBgn0040660.1;Parent=FBgn0040660.1.mrna1;Target=FBgn0040660.1 1 50 +
Chr2	stalkie_big_nohaplotig	CDS	10916635	10916779	100	-	2	ID=FBgn0040660.1.mrna1.cds2;Name=FBgn0040660.1;Parent=FBgn0040660.1.mrna1;Target=FBgn0040660.1 51 195 +
Chr2	stalkie_big_nohaplotig	CDS	10914772	10914897	100	-	0	ID=FBgn0040660.1.mrna1.cds3;Name=FBgn0040660.1;Parent=FBgn0040660.1.mrna1;Target=FBgn0040660.1 196 321 +
Chr1	stalkie_big_nohaplotig	mRNA	70082434	70103704	.	+	.	ID=FBgn0036974.1.mrna1;Name=FBgn0036974.1;Parent=FBgn0036974.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1371;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	70082434	70082576	100	+	.	ID=FBgn0036974.1.mrna1.exon1;Name=FBgn0036974.1;Parent=FBgn0036974.1.mrna1;Target=FBgn0036974.1 1 143 +
Chr1	stalkie_big_nohaplotig	exon	70090867	70091042	100	+	.	ID=FBgn0036974.1.mrna1.exon2;Name=FBgn0036974.1;Parent=FBgn0036974.1.mrna1;Target=FBgn0036974.1 144 319 +
Chr1	stalkie_big_nohaplotig	exon	70091115	70091584	100	+	.	ID=FBgn0036974.1.mrna1.exon3;Name=FBgn0036974.1;Parent=FBgn0036974.1.mrna1;Target=FBgn0036974.1 320 789 +
Chr1	stalkie_big_nohaplotig	exon	70101073	70101228	100	+	.	ID=FBgn0036974.1.mrna1.exon4;Name=FBgn0036974.1;Parent=FBgn0036974.1.mrna1;Target=FBgn0036974.1 790 945 +
Chr1	stalkie_big_nohaplotig	exon	70101290	70101487	100	+	.	ID=FBgn0036974.1.mrna1.exon5;Name=FBgn0036974.1;Parent=FBgn0036974.1.mrna1;Target=FBgn0036974.1 946 1143 +
Chr1	stalkie_big_nohaplotig	exon	70101557	70101704	100	+	.	ID=FBgn0036974.1.mrna1.exon6;Name=FBgn0036974.1;Parent=FBgn0036974.1.mrna1;Target=FBgn0036974.1 1144 1291 +
Chr1	stalkie_big_nohaplotig	exon	70103625	70103704	100	+	.	ID=FBgn0036974.1.mrna1.exon7;Name=FBgn0036974.1;Parent=FBgn0036974.1.mrna1;Target=FBgn0036974.1 1292 1371 +
Chr1	stalkie_big_nohaplotig	CDS	70082434	70082576	100	+	0	ID=FBgn0036974.1.mrna1.cds1;Name=FBgn0036974.1;Parent=FBgn0036974.1.mrna1;Target=FBgn0036974.1 1 143 +
Chr1	stalkie_big_nohaplotig	CDS	70090867	70091042	100	+	2	ID=FBgn0036974.1.mrna1.cds2;Name=FBgn0036974.1;Parent=FBgn0036974.1.mrna1;Target=FBgn0036974.1 144 319 +
Chr1	stalkie_big_nohaplotig	CDS	70091115	70091584	100	+	1	ID=FBgn0036974.1.mrna1.cds3;Name=FBgn0036974.1;Parent=FBgn0036974.1.mrna1;Target=FBgn0036974.1 320 789 +
Chr1	stalkie_big_nohaplotig	CDS	70101073	70101228	100	+	0	ID=FBgn0036974.1.mrna1.cds4;Name=FBgn0036974.1;Parent=FBgn0036974.1.mrna1;Target=FBgn0036974.1 790 945 +
Chr1	stalkie_big_nohaplotig	CDS	70101290	70101487	100	+	0	ID=FBgn0036974.1.mrna1.cds5;Name=FBgn0036974.1;Parent=FBgn0036974.1.mrna1;Target=FBgn0036974.1 946 1143 +
Chr1	stalkie_big_nohaplotig	CDS	70101557	70101704	100	+	0	ID=FBgn0036974.1.mrna1.cds6;Name=FBgn0036974.1;Parent=FBgn0036974.1.mrna1;Target=FBgn0036974.1 1144 1291 +
Chr1	stalkie_big_nohaplotig	CDS	70103625	70103704	100	+	1	ID=FBgn0036974.1.mrna1.cds7;Name=FBgn0036974.1;Parent=FBgn0036974.1.mrna1;Target=FBgn0036974.1 1292 1371 +
Chr2	stalkie_big_nohaplotig	mRNA	31973957	31975694	.	-	.	ID=FBgn0033679.1.mrna1;Name=FBgn0033679.1;Parent=FBgn0033679.1.path1;Dir=sensecoverage=74.7;identity=99.3;matches=881;mismatches=6;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	31975483	31975694	99	-	.	ID=FBgn0033679.1.mrna1.exon1;Name=FBgn0033679.1;Parent=FBgn0033679.1.mrna1;Target=FBgn0033679.1 302 513 +
Chr2	stalkie_big_nohaplotig	exon	31975233	31975386	100	-	.	ID=FBgn0033679.1.mrna1.exon2;Name=FBgn0033679.1;Parent=FBgn0033679.1.mrna1;Target=FBgn0033679.1 514 667 +
Chr2	stalkie_big_nohaplotig	exon	31975098	31975172	96	-	.	ID=FBgn0033679.1.mrna1.exon3;Name=FBgn0033679.1;Parent=FBgn0033679.1.mrna1;Target=FBgn0033679.1 668 742 +
Chr2	stalkie_big_nohaplotig	exon	31974851	31975032	99	-	.	ID=FBgn0033679.1.mrna1.exon4;Name=FBgn0033679.1;Parent=FBgn0033679.1.mrna1;Target=FBgn0033679.1 743 924 +
Chr2	stalkie_big_nohaplotig	exon	31974183	31974284	100	-	.	ID=FBgn0033679.1.mrna1.exon5;Name=FBgn0033679.1;Parent=FBgn0033679.1.mrna1;Target=FBgn0033679.1 925 1026 +
Chr2	stalkie_big_nohaplotig	exon	31973957	31974118	100	-	.	ID=FBgn0033679.1.mrna1.exon6;Name=FBgn0033679.1;Parent=FBgn0033679.1.mrna1;Target=FBgn0033679.1 1027 1188 +
Chr2	stalkie_big_nohaplotig	CDS	31975483	31975521	100	-	0	ID=FBgn0033679.1.mrna1.cds1;Name=FBgn0033679.1;Parent=FBgn0033679.1.mrna1;Target=FBgn0033679.1 475 513 +
Chr2	stalkie_big_nohaplotig	CDS	31975233	31975386	100	-	0	ID=FBgn0033679.1.mrna1.cds2;Name=FBgn0033679.1;Parent=FBgn0033679.1.mrna1;Target=FBgn0033679.1 514 667 +
Chr2	stalkie_big_nohaplotig	CDS	31975098	31975172	96	-	1	ID=FBgn0033679.1.mrna1.cds3;Name=FBgn0033679.1;Parent=FBgn0033679.1.mrna1;Target=FBgn0033679.1 668 742 +
Chr2	stalkie_big_nohaplotig	CDS	31974851	31975032	99	-	1	ID=FBgn0033679.1.mrna1.cds4;Name=FBgn0033679.1;Parent=FBgn0033679.1.mrna1;Target=FBgn0033679.1 743 924 +
Chr2	stalkie_big_nohaplotig	CDS	31974183	31974284	100	-	0	ID=FBgn0033679.1.mrna1.cds5;Name=FBgn0033679.1;Parent=FBgn0033679.1.mrna1;Target=FBgn0033679.1 925 1026 +
Chr2	stalkie_big_nohaplotig	CDS	31973957	31974118	100	-	0	ID=FBgn0033679.1.mrna1.cds6;Name=FBgn0033679.1;Parent=FBgn0033679.1.mrna1;Target=FBgn0033679.1 1027 1188 +
Chr2	stalkie_big_nohaplotig	mRNA	15458381	15460423	.	-	.	ID=FBgn0010423.1.mrna1;Name=FBgn0010423.1;Parent=FBgn0010423.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=287;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	15460394	15460423	100	-	.	ID=FBgn0010423.1.mrna1.exon1;Name=FBgn0010423.1;Parent=FBgn0010423.1.mrna1;Target=FBgn0010423.1 1 30 +
Chr2	stalkie_big_nohaplotig	exon	15458530	15458704	99	-	.	ID=FBgn0010423.1.mrna1.exon2;Name=FBgn0010423.1;Parent=FBgn0010423.1.mrna1;Target=FBgn0010423.1 31 205 +
Chr2	stalkie_big_nohaplotig	exon	15458381	15458463	100	-	.	ID=FBgn0010423.1.mrna1.exon3;Name=FBgn0010423.1;Parent=FBgn0010423.1.mrna1;Target=FBgn0010423.1 206 288 +
Chr2	stalkie_big_nohaplotig	CDS	15460394	15460423	100	-	0	ID=FBgn0010423.1.mrna1.cds1;Name=FBgn0010423.1;Parent=FBgn0010423.1.mrna1;Target=FBgn0010423.1 1 30 +
Chr2	stalkie_big_nohaplotig	CDS	15458530	15458704	99	-	0	ID=FBgn0010423.1.mrna1.cds2;Name=FBgn0010423.1;Parent=FBgn0010423.1.mrna1;Target=FBgn0010423.1 31 205 +
Chr2	stalkie_big_nohaplotig	CDS	15458381	15458463	100	-	1	ID=FBgn0010423.1.mrna1.cds3;Name=FBgn0010423.1;Parent=FBgn0010423.1.mrna1;Target=FBgn0010423.1 206 288 +
Chr2	stalkie_big_nohaplotig	mRNA	138653448	138658258	.	-	.	ID=FBgn0043457.1.mrna1;Name=FBgn0043457.1;Parent=FBgn0043457.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1129;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	138657530	138658258	99	-	.	ID=FBgn0043457.1.mrna1.exon1;Name=FBgn0043457.1;Parent=FBgn0043457.1.mrna1;Target=FBgn0043457.1 1 729 +
Chr2	stalkie_big_nohaplotig	exon	138657295	138657450	100	-	.	ID=FBgn0043457.1.mrna1.exon2;Name=FBgn0043457.1;Parent=FBgn0043457.1.mrna1;Target=FBgn0043457.1 730 885 +
Chr2	stalkie_big_nohaplotig	exon	138655784	138655935	100	-	.	ID=FBgn0043457.1.mrna1.exon3;Name=FBgn0043457.1;Parent=FBgn0043457.1.mrna1;Target=FBgn0043457.1 886 1037 +
Chr2	stalkie_big_nohaplotig	exon	138653448	138653541	100	-	.	ID=FBgn0043457.1.mrna1.exon4;Name=FBgn0043457.1;Parent=FBgn0043457.1.mrna1;Target=FBgn0043457.1 1038 1131 +
Chr2	stalkie_big_nohaplotig	CDS	138657530	138658258	99	-	0	ID=FBgn0043457.1.mrna1.cds1;Name=FBgn0043457.1;Parent=FBgn0043457.1.mrna1;Target=FBgn0043457.1 1 729 +
Chr2	stalkie_big_nohaplotig	CDS	138657295	138657450	100	-	0	ID=FBgn0043457.1.mrna1.cds2;Name=FBgn0043457.1;Parent=FBgn0043457.1.mrna1;Target=FBgn0043457.1 730 885 +
Chr2	stalkie_big_nohaplotig	CDS	138655784	138655935	100	-	0	ID=FBgn0043457.1.mrna1.cds3;Name=FBgn0043457.1;Parent=FBgn0043457.1.mrna1;Target=FBgn0043457.1 886 1037 +
Chr2	stalkie_big_nohaplotig	CDS	138653448	138653541	100	-	2	ID=FBgn0043457.1.mrna1.cds4;Name=FBgn0043457.1;Parent=FBgn0043457.1.mrna1;Target=FBgn0043457.1 1038 1131 +
ChrX	stalkie_big_nohaplotig	mRNA	92150474	92203306	.	+	.	ID=FBgn0051612.1.mrna1;Name=FBgn0051612.1;Parent=FBgn0051612.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3579;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	92150474	92150512	100	+	.	ID=FBgn0051612.1.mrna1.exon1;Name=FBgn0051612.1;Parent=FBgn0051612.1.mrna1;Target=FBgn0051612.1 1 39 +
ChrX	stalkie_big_nohaplotig	exon	92159237	92161224	100	+	.	ID=FBgn0051612.1.mrna1.exon2;Name=FBgn0051612.1;Parent=FBgn0051612.1.mrna1;Target=FBgn0051612.1 40 2027 +
ChrX	stalkie_big_nohaplotig	exon	92161317	92161937	100	+	.	ID=FBgn0051612.1.mrna1.exon3;Name=FBgn0051612.1;Parent=FBgn0051612.1.mrna1;Target=FBgn0051612.1 2028 2648 +
ChrX	stalkie_big_nohaplotig	exon	92162013	92162336	100	+	.	ID=FBgn0051612.1.mrna1.exon4;Name=FBgn0051612.1;Parent=FBgn0051612.1.mrna1;Target=FBgn0051612.1 2649 2972 +
ChrX	stalkie_big_nohaplotig	exon	92191278	92191511	100	+	.	ID=FBgn0051612.1.mrna1.exon5;Name=FBgn0051612.1;Parent=FBgn0051612.1.mrna1;Target=FBgn0051612.1 2973 3206 +
ChrX	stalkie_big_nohaplotig	exon	92202934	92203306	100	+	.	ID=FBgn0051612.1.mrna1.exon6;Name=FBgn0051612.1;Parent=FBgn0051612.1.mrna1;Target=FBgn0051612.1 3207 3579 +
ChrX	stalkie_big_nohaplotig	CDS	92150474	92150512	100	+	0	ID=FBgn0051612.1.mrna1.cds1;Name=FBgn0051612.1;Parent=FBgn0051612.1.mrna1;Target=FBgn0051612.1 1 39 +
ChrX	stalkie_big_nohaplotig	CDS	92159237	92161224	100	+	0	ID=FBgn0051612.1.mrna1.cds2;Name=FBgn0051612.1;Parent=FBgn0051612.1.mrna1;Target=FBgn0051612.1 40 2027 +
ChrX	stalkie_big_nohaplotig	CDS	92161317	92161937	100	+	2	ID=FBgn0051612.1.mrna1.cds3;Name=FBgn0051612.1;Parent=FBgn0051612.1.mrna1;Target=FBgn0051612.1 2028 2648 +
ChrX	stalkie_big_nohaplotig	CDS	92162013	92162336	100	+	2	ID=FBgn0051612.1.mrna1.cds4;Name=FBgn0051612.1;Parent=FBgn0051612.1.mrna1;Target=FBgn0051612.1 2649 2972 +
ChrX	stalkie_big_nohaplotig	CDS	92191278	92191511	100	+	2	ID=FBgn0051612.1.mrna1.cds5;Name=FBgn0051612.1;Parent=FBgn0051612.1.mrna1;Target=FBgn0051612.1 2973 3206 +
ChrX	stalkie_big_nohaplotig	CDS	92202934	92203306	100	+	2	ID=FBgn0051612.1.mrna1.cds6;Name=FBgn0051612.1;Parent=FBgn0051612.1.mrna1;Target=FBgn0051612.1 3207 3579 +
Chr1	stalkie_big_nohaplotig	mRNA	30605401	30609472	.	+	.	ID=FBgn0036257.1.mrna1;Name=FBgn0036257.1;Parent=FBgn0036257.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=1430;mismatches=7;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	30605401	30605458	100	+	.	ID=FBgn0036257.1.mrna1.exon1;Name=FBgn0036257.1;Parent=FBgn0036257.1.mrna1;Target=FBgn0036257.1 1 58 +
Chr1	stalkie_big_nohaplotig	exon	30606591	30606716	98	+	.	ID=FBgn0036257.1.mrna1.exon2;Name=FBgn0036257.1;Parent=FBgn0036257.1.mrna1;Target=FBgn0036257.1 59 184 +
Chr1	stalkie_big_nohaplotig	exon	30606803	30606838	100	+	.	ID=FBgn0036257.1.mrna1.exon3;Name=FBgn0036257.1;Parent=FBgn0036257.1.mrna1;Target=FBgn0036257.1 185 220 +
Chr1	stalkie_big_nohaplotig	exon	30606898	30606962	100	+	.	ID=FBgn0036257.1.mrna1.exon4;Name=FBgn0036257.1;Parent=FBgn0036257.1.mrna1;Target=FBgn0036257.1 221 285 +
Chr1	stalkie_big_nohaplotig	exon	30607019	30607146	99	+	.	ID=FBgn0036257.1.mrna1.exon5;Name=FBgn0036257.1;Parent=FBgn0036257.1.mrna1;Target=FBgn0036257.1 286 413 +
Chr1	stalkie_big_nohaplotig	exon	30607210	30607928	99	+	.	ID=FBgn0036257.1.mrna1.exon6;Name=FBgn0036257.1;Parent=FBgn0036257.1.mrna1;Target=FBgn0036257.1 414 1132 +
Chr1	stalkie_big_nohaplotig	exon	30609110	30609216	100	+	.	ID=FBgn0036257.1.mrna1.exon7;Name=FBgn0036257.1;Parent=FBgn0036257.1.mrna1;Target=FBgn0036257.1 1133 1239 +
Chr1	stalkie_big_nohaplotig	exon	30609275	30609472	98	+	.	ID=FBgn0036257.1.mrna1.exon8;Name=FBgn0036257.1;Parent=FBgn0036257.1.mrna1;Target=FBgn0036257.1 1240 1437 +
Chr1	stalkie_big_nohaplotig	CDS	30605401	30605458	100	+	0	ID=FBgn0036257.1.mrna1.cds1;Name=FBgn0036257.1;Parent=FBgn0036257.1.mrna1;Target=FBgn0036257.1 1 58 +
Chr1	stalkie_big_nohaplotig	CDS	30606591	30606716	98	+	1	ID=FBgn0036257.1.mrna1.cds2;Name=FBgn0036257.1;Parent=FBgn0036257.1.mrna1;Target=FBgn0036257.1 59 184 +
Chr1	stalkie_big_nohaplotig	CDS	30606803	30606838	100	+	1	ID=FBgn0036257.1.mrna1.cds3;Name=FBgn0036257.1;Parent=FBgn0036257.1.mrna1;Target=FBgn0036257.1 185 220 +
Chr1	stalkie_big_nohaplotig	CDS	30606898	30606962	100	+	1	ID=FBgn0036257.1.mrna1.cds4;Name=FBgn0036257.1;Parent=FBgn0036257.1.mrna1;Target=FBgn0036257.1 221 285 +
Chr1	stalkie_big_nohaplotig	CDS	30607019	30607146	99	+	0	ID=FBgn0036257.1.mrna1.cds5;Name=FBgn0036257.1;Parent=FBgn0036257.1.mrna1;Target=FBgn0036257.1 286 413 +
Chr1	stalkie_big_nohaplotig	CDS	30607210	30607928	99	+	2	ID=FBgn0036257.1.mrna1.cds6;Name=FBgn0036257.1;Parent=FBgn0036257.1.mrna1;Target=FBgn0036257.1 414 1132 +
Chr1	stalkie_big_nohaplotig	CDS	30609110	30609216	100	+	1	ID=FBgn0036257.1.mrna1.cds7;Name=FBgn0036257.1;Parent=FBgn0036257.1.mrna1;Target=FBgn0036257.1 1133 1239 +
Chr1	stalkie_big_nohaplotig	CDS	30609275	30609472	98	+	0	ID=FBgn0036257.1.mrna1.cds8;Name=FBgn0036257.1;Parent=FBgn0036257.1.mrna1;Target=FBgn0036257.1 1240 1437 +
Chr1	stalkie_big_nohaplotig	mRNA	25297156	25298060	.	-	.	ID=FBgn0015218.3.mrna1;Name=FBgn0015218.3;Parent=FBgn0015218.3.path1;Dir=sensecoverage=100.0;identity=100.0;matches=720;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	25298030	25298060	100	-	.	ID=FBgn0015218.3.mrna1.exon1;Name=FBgn0015218.3;Parent=FBgn0015218.3.mrna1;Target=FBgn0015218.3 1 31 +
Chr1	stalkie_big_nohaplotig	exon	25297156	25297844	100	-	.	ID=FBgn0015218.3.mrna1.exon2;Name=FBgn0015218.3;Parent=FBgn0015218.3.mrna1;Target=FBgn0015218.3 32 720 +
Chr1	stalkie_big_nohaplotig	CDS	25298030	25298060	100	-	0	ID=FBgn0015218.3.mrna1.cds1;Name=FBgn0015218.3;Parent=FBgn0015218.3.mrna1;Target=FBgn0015218.3 1 31 +
Chr1	stalkie_big_nohaplotig	CDS	25297156	25297844	100	-	1	ID=FBgn0015218.3.mrna1.cds2;Name=FBgn0015218.3;Parent=FBgn0015218.3.mrna1;Target=FBgn0015218.3 32 720 +
ChrX	stalkie_big_nohaplotig	mRNA	24543291	24546152	.	+	.	ID=FBgn0015399.1.mrna1;Name=FBgn0015399.1;Parent=FBgn0015399.1.path1;Dir=indeterminatecoverage=99.9;identity=99.7;matches=2854;mismatches=8;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	24543291	24546152	99	+	.	ID=FBgn0015399.1.mrna1.exon1;Name=FBgn0015399.1;Parent=FBgn0015399.1.mrna1;Target=FBgn0015399.1 2865 4 .
ChrX	stalkie_big_nohaplotig	CDS	24543291	24546152	99	+	0	ID=FBgn0015399.1.mrna1.cds1;Name=FBgn0015399.1;Parent=FBgn0015399.1.mrna1;Target=FBgn0015399.1 2865 4 .
Chr2	stalkie_big_nohaplotig	mRNA	30805819	30820236	.	-	.	ID=FBgn0050389.mrna1;Name=FBgn0050389;Parent=FBgn0050389.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1848;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	30820136	30820236	100	-	.	ID=FBgn0050389.mrna1.exon1;Name=FBgn0050389;Parent=FBgn0050389.mrna1;Target=FBgn0050389 1 101 +
Chr2	stalkie_big_nohaplotig	exon	30813958	30814102	100	-	.	ID=FBgn0050389.mrna1.exon2;Name=FBgn0050389;Parent=FBgn0050389.mrna1;Target=FBgn0050389 102 246 +
Chr2	stalkie_big_nohaplotig	exon	30813762	30813888	98	-	.	ID=FBgn0050389.mrna1.exon3;Name=FBgn0050389;Parent=FBgn0050389.mrna1;Target=FBgn0050389 247 373 +
Chr2	stalkie_big_nohaplotig	exon	30813561	30813687	99	-	.	ID=FBgn0050389.mrna1.exon4;Name=FBgn0050389;Parent=FBgn0050389.mrna1;Target=FBgn0050389 374 500 +
Chr2	stalkie_big_nohaplotig	exon	30808295	30809061	100	-	.	ID=FBgn0050389.mrna1.exon5;Name=FBgn0050389;Parent=FBgn0050389.mrna1;Target=FBgn0050389 501 1267 +
Chr2	stalkie_big_nohaplotig	exon	30806280	30806537	100	-	.	ID=FBgn0050389.mrna1.exon6;Name=FBgn0050389;Parent=FBgn0050389.mrna1;Target=FBgn0050389 1268 1525 +
Chr2	stalkie_big_nohaplotig	exon	30806063	30806215	100	-	.	ID=FBgn0050389.mrna1.exon7;Name=FBgn0050389;Parent=FBgn0050389.mrna1;Target=FBgn0050389 1526 1678 +
Chr2	stalkie_big_nohaplotig	exon	30805819	30805991	100	-	.	ID=FBgn0050389.mrna1.exon8;Name=FBgn0050389;Parent=FBgn0050389.mrna1;Target=FBgn0050389 1679 1851 +
Chr2	stalkie_big_nohaplotig	CDS	30820136	30820236	100	-	0	ID=FBgn0050389.mrna1.cds1;Name=FBgn0050389;Parent=FBgn0050389.mrna1;Target=FBgn0050389 1 101 +
Chr2	stalkie_big_nohaplotig	CDS	30813958	30814102	100	-	2	ID=FBgn0050389.mrna1.cds2;Name=FBgn0050389;Parent=FBgn0050389.mrna1;Target=FBgn0050389 102 246 +
Chr2	stalkie_big_nohaplotig	CDS	30813762	30813888	98	-	0	ID=FBgn0050389.mrna1.cds3;Name=FBgn0050389;Parent=FBgn0050389.mrna1;Target=FBgn0050389 247 373 +
Chr2	stalkie_big_nohaplotig	CDS	30813561	30813687	99	-	1	ID=FBgn0050389.mrna1.cds4;Name=FBgn0050389;Parent=FBgn0050389.mrna1;Target=FBgn0050389 374 500 +
Chr2	stalkie_big_nohaplotig	CDS	30808295	30809061	100	-	2	ID=FBgn0050389.mrna1.cds5;Name=FBgn0050389;Parent=FBgn0050389.mrna1;Target=FBgn0050389 501 1267 +
Chr2	stalkie_big_nohaplotig	CDS	30806280	30806537	100	-	1	ID=FBgn0050389.mrna1.cds6;Name=FBgn0050389;Parent=FBgn0050389.mrna1;Target=FBgn0050389 1268 1525 +
Chr2	stalkie_big_nohaplotig	CDS	30806063	30806215	100	-	1	ID=FBgn0050389.mrna1.cds7;Name=FBgn0050389;Parent=FBgn0050389.mrna1;Target=FBgn0050389 1526 1678 +
Chr2	stalkie_big_nohaplotig	CDS	30805819	30805991	100	-	1	ID=FBgn0050389.mrna1.cds8;Name=FBgn0050389;Parent=FBgn0050389.mrna1;Target=FBgn0050389 1679 1851 +
Chr2	stalkie_big_nohaplotig	mRNA	30742556	30748879	.	+	.	ID=FBgn0038968.1.mrna1;Name=FBgn0038968.1;Parent=FBgn0038968.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=6134;mismatches=13;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	30742556	30742913	100	+	.	ID=FBgn0038968.1.mrna1.exon1;Name=FBgn0038968.1;Parent=FBgn0038968.1.mrna1;Target=FBgn0038968.1 1 358 +
Chr2	stalkie_big_nohaplotig	exon	30742972	30743877	99	+	.	ID=FBgn0038968.1.mrna1.exon2;Name=FBgn0038968.1;Parent=FBgn0038968.1.mrna1;Target=FBgn0038968.1 359 1264 +
Chr2	stalkie_big_nohaplotig	exon	30743940	30744922	99	+	.	ID=FBgn0038968.1.mrna1.exon3;Name=FBgn0038968.1;Parent=FBgn0038968.1.mrna1;Target=FBgn0038968.1 1265 2247 +
Chr2	stalkie_big_nohaplotig	exon	30744980	30748879	99	+	.	ID=FBgn0038968.1.mrna1.exon4;Name=FBgn0038968.1;Parent=FBgn0038968.1.mrna1;Target=FBgn0038968.1 2248 6147 +
Chr2	stalkie_big_nohaplotig	CDS	30742556	30742913	100	+	0	ID=FBgn0038968.1.mrna1.cds1;Name=FBgn0038968.1;Parent=FBgn0038968.1.mrna1;Target=FBgn0038968.1 1 358 +
Chr2	stalkie_big_nohaplotig	CDS	30742972	30743877	99	+	1	ID=FBgn0038968.1.mrna1.cds2;Name=FBgn0038968.1;Parent=FBgn0038968.1.mrna1;Target=FBgn0038968.1 359 1264 +
Chr2	stalkie_big_nohaplotig	CDS	30743940	30744922	99	+	1	ID=FBgn0038968.1.mrna1.cds3;Name=FBgn0038968.1;Parent=FBgn0038968.1.mrna1;Target=FBgn0038968.1 1265 2247 +
Chr2	stalkie_big_nohaplotig	CDS	30744980	30748879	99	+	0	ID=FBgn0038968.1.mrna1.cds4;Name=FBgn0038968.1;Parent=FBgn0038968.1.mrna1;Target=FBgn0038968.1 2248 6147 +
Chr2	stalkie_big_nohaplotig	mRNA	2211002	2213515	.	-	.	ID=FBgn0005695.1.mrna1;Name=FBgn0005695.1;Parent=FBgn0005695.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1575;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	2213296	2213515	100	-	.	ID=FBgn0005695.1.mrna1.exon1;Name=FBgn0005695.1;Parent=FBgn0005695.1.mrna1;Target=FBgn0005695.1 1 220 +
Chr2	stalkie_big_nohaplotig	exon	2213085	2213236	100	-	.	ID=FBgn0005695.1.mrna1.exon2;Name=FBgn0005695.1;Parent=FBgn0005695.1.mrna1;Target=FBgn0005695.1 221 372 +
Chr2	stalkie_big_nohaplotig	exon	2212477	2213027	100	-	.	ID=FBgn0005695.1.mrna1.exon3;Name=FBgn0005695.1;Parent=FBgn0005695.1.mrna1;Target=FBgn0005695.1 373 923 +
Chr2	stalkie_big_nohaplotig	exon	2211507	2211725	100	-	.	ID=FBgn0005695.1.mrna1.exon4;Name=FBgn0005695.1;Parent=FBgn0005695.1.mrna1;Target=FBgn0005695.1 924 1142 +
Chr2	stalkie_big_nohaplotig	exon	2211002	2211434	100	-	.	ID=FBgn0005695.1.mrna1.exon5;Name=FBgn0005695.1;Parent=FBgn0005695.1.mrna1;Target=FBgn0005695.1 1143 1575 +
Chr2	stalkie_big_nohaplotig	CDS	2213296	2213515	100	-	0	ID=FBgn0005695.1.mrna1.cds1;Name=FBgn0005695.1;Parent=FBgn0005695.1.mrna1;Target=FBgn0005695.1 1 220 +
Chr2	stalkie_big_nohaplotig	CDS	2213085	2213236	100	-	1	ID=FBgn0005695.1.mrna1.cds2;Name=FBgn0005695.1;Parent=FBgn0005695.1.mrna1;Target=FBgn0005695.1 221 372 +
Chr2	stalkie_big_nohaplotig	CDS	2212477	2213027	100	-	0	ID=FBgn0005695.1.mrna1.cds3;Name=FBgn0005695.1;Parent=FBgn0005695.1.mrna1;Target=FBgn0005695.1 373 923 +
Chr2	stalkie_big_nohaplotig	CDS	2211507	2211725	100	-	2	ID=FBgn0005695.1.mrna1.cds4;Name=FBgn0005695.1;Parent=FBgn0005695.1.mrna1;Target=FBgn0005695.1 924 1142 +
Chr2	stalkie_big_nohaplotig	CDS	2211002	2211434	100	-	2	ID=FBgn0005695.1.mrna1.cds5;Name=FBgn0005695.1;Parent=FBgn0005695.1.mrna1;Target=FBgn0005695.1 1143 1575 +
Chr2	stalkie_big_nohaplotig	mRNA	90399482	90409227	.	+	.	ID=FBgn0000146.2.mrna2;Name=FBgn0000146.2;Parent=FBgn0000146.2.path2;Dir=sensecoverage=97.8;identity=99.7;matches=2951;mismatches=8;indels=0;unknowns=4
Chr2	stalkie_big_nohaplotig	exon	90399482	90399622	99	+	.	ID=FBgn0000146.2.mrna2.exon1;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 68 208 +
Chr2	stalkie_big_nohaplotig	exon	90402940	90403055	100	+	.	ID=FBgn0000146.2.mrna2.exon2;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 209 324 +
Chr2	stalkie_big_nohaplotig	exon	90403201	90403357	99	+	.	ID=FBgn0000146.2.mrna2.exon3;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 325 481 +
Chr2	stalkie_big_nohaplotig	exon	90403458	90403586	98	+	.	ID=FBgn0000146.2.mrna2.exon4;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 482 610 +
Chr2	stalkie_big_nohaplotig	exon	90403663	90403689	100	+	.	ID=FBgn0000146.2.mrna2.exon5;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 611 637 +
Chr2	stalkie_big_nohaplotig	exon	90403770	90403790	100	+	.	ID=FBgn0000146.2.mrna2.exon6;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 638 658 +
Chr2	stalkie_big_nohaplotig	exon	90403896	90404389	100	+	.	ID=FBgn0000146.2.mrna2.exon7;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 659 1152 +
Chr2	stalkie_big_nohaplotig	exon	90404873	90405065	99	+	.	ID=FBgn0000146.2.mrna2.exon8;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 1153 1345 +
Chr2	stalkie_big_nohaplotig	exon	90405126	90405253	100	+	.	ID=FBgn0000146.2.mrna2.exon9;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 1346 1473 +
Chr2	stalkie_big_nohaplotig	exon	90406767	90406921	100	+	.	ID=FBgn0000146.2.mrna2.exon10;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 1474 1628 +
Chr2	stalkie_big_nohaplotig	exon	90406985	90407374	99	+	.	ID=FBgn0000146.2.mrna2.exon11;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 1629 2018 +
Chr2	stalkie_big_nohaplotig	exon	90408155	90408265	100	+	.	ID=FBgn0000146.2.mrna2.exon12;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 2019 2129 +
Chr2	stalkie_big_nohaplotig	exon	90408327	90409227	99	+	.	ID=FBgn0000146.2.mrna2.exon13;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 2130 3030 +
Chr2	stalkie_big_nohaplotig	CDS	90399482	90399622	99	+	1	ID=FBgn0000146.2.mrna2.cds1;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 68 208 +
Chr2	stalkie_big_nohaplotig	CDS	90402940	90403055	100	+	1	ID=FBgn0000146.2.mrna2.cds2;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 209 324 +
Chr2	stalkie_big_nohaplotig	CDS	90403201	90403357	99	+	0	ID=FBgn0000146.2.mrna2.cds3;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 325 481 +
Chr2	stalkie_big_nohaplotig	CDS	90403458	90403586	98	+	1	ID=FBgn0000146.2.mrna2.cds4;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 482 610 +
Chr2	stalkie_big_nohaplotig	CDS	90403663	90403689	100	+	1	ID=FBgn0000146.2.mrna2.cds5;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 611 637 +
Chr2	stalkie_big_nohaplotig	CDS	90403770	90403790	100	+	1	ID=FBgn0000146.2.mrna2.cds6;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 638 658 +
Chr2	stalkie_big_nohaplotig	CDS	90403896	90404389	100	+	1	ID=FBgn0000146.2.mrna2.cds7;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 659 1152 +
Chr2	stalkie_big_nohaplotig	CDS	90404873	90405065	99	+	0	ID=FBgn0000146.2.mrna2.cds8;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 1153 1345 +
Chr2	stalkie_big_nohaplotig	CDS	90405126	90405253	100	+	1	ID=FBgn0000146.2.mrna2.cds9;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 1346 1473 +
Chr2	stalkie_big_nohaplotig	CDS	90406767	90406921	100	+	0	ID=FBgn0000146.2.mrna2.cds10;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 1474 1628 +
Chr2	stalkie_big_nohaplotig	CDS	90406985	90407374	99	+	2	ID=FBgn0000146.2.mrna2.cds11;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 1629 2018 +
Chr2	stalkie_big_nohaplotig	CDS	90408155	90408265	100	+	2	ID=FBgn0000146.2.mrna2.cds12;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 2019 2129 +
Chr2	stalkie_big_nohaplotig	CDS	90408327	90409227	99	+	2	ID=FBgn0000146.2.mrna2.cds13;Name=FBgn0000146.2;Parent=FBgn0000146.2.mrna2;Target=FBgn0000146.2 2130 3030 +
ChrX	stalkie_big_nohaplotig	mRNA	19330257	19341440	.	+	.	ID=FBgn0031985.1.mrna1;Name=FBgn0031985.1;Parent=FBgn0031985.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=5100;mismatches=3;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	19330257	19330400	99	+	.	ID=FBgn0031985.1.mrna1.exon1;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 1 144 +
ChrX	stalkie_big_nohaplotig	exon	19330751	19330882	100	+	.	ID=FBgn0031985.1.mrna1.exon2;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 145 276 +
ChrX	stalkie_big_nohaplotig	exon	19331029	19331454	99	+	.	ID=FBgn0031985.1.mrna1.exon3;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 277 702 +
ChrX	stalkie_big_nohaplotig	exon	19331522	19331647	100	+	.	ID=FBgn0031985.1.mrna1.exon4;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 703 828 +
ChrX	stalkie_big_nohaplotig	exon	19331716	19331916	100	+	.	ID=FBgn0031985.1.mrna1.exon5;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 829 1029 +
ChrX	stalkie_big_nohaplotig	exon	19331973	19332207	100	+	.	ID=FBgn0031985.1.mrna1.exon6;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 1030 1264 +
ChrX	stalkie_big_nohaplotig	exon	19332266	19332407	100	+	.	ID=FBgn0031985.1.mrna1.exon7;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 1265 1406 +
ChrX	stalkie_big_nohaplotig	exon	19332749	19332875	100	+	.	ID=FBgn0031985.1.mrna1.exon8;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 1407 1533 +
ChrX	stalkie_big_nohaplotig	exon	19332940	19333243	100	+	.	ID=FBgn0031985.1.mrna1.exon9;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 1534 1837 +
ChrX	stalkie_big_nohaplotig	exon	19333313	19333617	100	+	.	ID=FBgn0031985.1.mrna1.exon10;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 1838 2142 +
ChrX	stalkie_big_nohaplotig	exon	19333672	19333866	100	+	.	ID=FBgn0031985.1.mrna1.exon11;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 2143 2337 +
ChrX	stalkie_big_nohaplotig	exon	19333947	19334159	100	+	.	ID=FBgn0031985.1.mrna1.exon12;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 2338 2550 +
ChrX	stalkie_big_nohaplotig	exon	19334669	19334844	100	+	.	ID=FBgn0031985.1.mrna1.exon13;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 2551 2726 +
ChrX	stalkie_big_nohaplotig	exon	19334906	19335068	100	+	.	ID=FBgn0031985.1.mrna1.exon14;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 2727 2889 +
ChrX	stalkie_big_nohaplotig	exon	19335145	19335289	100	+	.	ID=FBgn0031985.1.mrna1.exon15;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 2890 3034 +
ChrX	stalkie_big_nohaplotig	exon	19335365	19335645	100	+	.	ID=FBgn0031985.1.mrna1.exon16;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 3035 3315 +
ChrX	stalkie_big_nohaplotig	exon	19335712	19335930	100	+	.	ID=FBgn0031985.1.mrna1.exon17;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 3316 3534 +
ChrX	stalkie_big_nohaplotig	exon	19335988	19336145	100	+	.	ID=FBgn0031985.1.mrna1.exon18;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 3535 3692 +
ChrX	stalkie_big_nohaplotig	exon	19338210	19338372	100	+	.	ID=FBgn0031985.1.mrna1.exon19;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 3693 3855 +
ChrX	stalkie_big_nohaplotig	exon	19338442	19338726	99	+	.	ID=FBgn0031985.1.mrna1.exon20;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 3856 4140 +
ChrX	stalkie_big_nohaplotig	exon	19339479	19339663	100	+	.	ID=FBgn0031985.1.mrna1.exon21;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 4141 4325 +
ChrX	stalkie_big_nohaplotig	exon	19339721	19340209	100	+	.	ID=FBgn0031985.1.mrna1.exon22;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 4326 4814 +
ChrX	stalkie_big_nohaplotig	exon	19340270	19340352	100	+	.	ID=FBgn0031985.1.mrna1.exon23;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 4815 4897 +
ChrX	stalkie_big_nohaplotig	exon	19341235	19341440	100	+	.	ID=FBgn0031985.1.mrna1.exon24;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 4898 5103 +
ChrX	stalkie_big_nohaplotig	CDS	19330257	19330400	99	+	0	ID=FBgn0031985.1.mrna1.cds1;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 1 144 +
ChrX	stalkie_big_nohaplotig	CDS	19330751	19330882	100	+	0	ID=FBgn0031985.1.mrna1.cds2;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 145 276 +
ChrX	stalkie_big_nohaplotig	CDS	19331029	19331454	99	+	0	ID=FBgn0031985.1.mrna1.cds3;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 277 702 +
ChrX	stalkie_big_nohaplotig	CDS	19331522	19331647	100	+	0	ID=FBgn0031985.1.mrna1.cds4;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 703 828 +
ChrX	stalkie_big_nohaplotig	CDS	19331716	19331916	100	+	0	ID=FBgn0031985.1.mrna1.cds5;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 829 1029 +
ChrX	stalkie_big_nohaplotig	CDS	19331973	19332207	100	+	0	ID=FBgn0031985.1.mrna1.cds6;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 1030 1264 +
ChrX	stalkie_big_nohaplotig	CDS	19332266	19332407	100	+	1	ID=FBgn0031985.1.mrna1.cds7;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 1265 1406 +
ChrX	stalkie_big_nohaplotig	CDS	19332749	19332875	100	+	2	ID=FBgn0031985.1.mrna1.cds8;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 1407 1533 +
ChrX	stalkie_big_nohaplotig	CDS	19332940	19333243	100	+	0	ID=FBgn0031985.1.mrna1.cds9;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 1534 1837 +
ChrX	stalkie_big_nohaplotig	CDS	19333313	19333617	100	+	1	ID=FBgn0031985.1.mrna1.cds10;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 1838 2142 +
ChrX	stalkie_big_nohaplotig	CDS	19333672	19333866	100	+	0	ID=FBgn0031985.1.mrna1.cds11;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 2143 2337 +
ChrX	stalkie_big_nohaplotig	CDS	19333947	19334159	100	+	0	ID=FBgn0031985.1.mrna1.cds12;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 2338 2550 +
ChrX	stalkie_big_nohaplotig	CDS	19334669	19334844	100	+	0	ID=FBgn0031985.1.mrna1.cds13;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 2551 2726 +
ChrX	stalkie_big_nohaplotig	CDS	19334906	19335068	100	+	2	ID=FBgn0031985.1.mrna1.cds14;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 2727 2889 +
ChrX	stalkie_big_nohaplotig	CDS	19335145	19335289	100	+	0	ID=FBgn0031985.1.mrna1.cds15;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 2890 3034 +
ChrX	stalkie_big_nohaplotig	CDS	19335365	19335645	100	+	1	ID=FBgn0031985.1.mrna1.cds16;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 3035 3315 +
ChrX	stalkie_big_nohaplotig	CDS	19335712	19335930	100	+	0	ID=FBgn0031985.1.mrna1.cds17;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 3316 3534 +
ChrX	stalkie_big_nohaplotig	CDS	19335988	19336145	100	+	0	ID=FBgn0031985.1.mrna1.cds18;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 3535 3692 +
ChrX	stalkie_big_nohaplotig	CDS	19338210	19338372	100	+	2	ID=FBgn0031985.1.mrna1.cds19;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 3693 3855 +
ChrX	stalkie_big_nohaplotig	CDS	19338442	19338726	99	+	0	ID=FBgn0031985.1.mrna1.cds20;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 3856 4140 +
ChrX	stalkie_big_nohaplotig	CDS	19339479	19339663	100	+	0	ID=FBgn0031985.1.mrna1.cds21;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 4141 4325 +
ChrX	stalkie_big_nohaplotig	CDS	19339721	19340209	100	+	2	ID=FBgn0031985.1.mrna1.cds22;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 4326 4814 +
ChrX	stalkie_big_nohaplotig	CDS	19340270	19340352	100	+	2	ID=FBgn0031985.1.mrna1.cds23;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 4815 4897 +
ChrX	stalkie_big_nohaplotig	CDS	19341235	19341440	100	+	1	ID=FBgn0031985.1.mrna1.cds24;Name=FBgn0031985.1;Parent=FBgn0031985.1.mrna1;Target=FBgn0031985.1 4898 5103 +
Chr2	stalkie_big_nohaplotig	mRNA	15737115	15740285	.	+	.	ID=FBgn0026326.1.mrna1;Name=FBgn0026326.1;Parent=FBgn0026326.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=2205;mismatches=12;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	15737115	15737241	99	+	.	ID=FBgn0026326.1.mrna1.exon1;Name=FBgn0026326.1;Parent=FBgn0026326.1.mrna1;Target=FBgn0026326.1 1 127 +
Chr2	stalkie_big_nohaplotig	exon	15737305	15737459	100	+	.	ID=FBgn0026326.1.mrna1.exon2;Name=FBgn0026326.1;Parent=FBgn0026326.1.mrna1;Target=FBgn0026326.1 128 282 +
Chr2	stalkie_big_nohaplotig	exon	15737511	15737858	99	+	.	ID=FBgn0026326.1.mrna1.exon3;Name=FBgn0026326.1;Parent=FBgn0026326.1.mrna1;Target=FBgn0026326.1 283 630 +
Chr2	stalkie_big_nohaplotig	exon	15737925	15738119	98	+	.	ID=FBgn0026326.1.mrna1.exon4;Name=FBgn0026326.1;Parent=FBgn0026326.1.mrna1;Target=FBgn0026326.1 631 825 +
Chr2	stalkie_big_nohaplotig	exon	15738214	15738396	98	+	.	ID=FBgn0026326.1.mrna1.exon5;Name=FBgn0026326.1;Parent=FBgn0026326.1.mrna1;Target=FBgn0026326.1 826 1008 +
Chr2	stalkie_big_nohaplotig	exon	15738461	15738667	100	+	.	ID=FBgn0026326.1.mrna1.exon6;Name=FBgn0026326.1;Parent=FBgn0026326.1.mrna1;Target=FBgn0026326.1 1009 1215 +
Chr2	stalkie_big_nohaplotig	exon	15738730	15738886	100	+	.	ID=FBgn0026326.1.mrna1.exon7;Name=FBgn0026326.1;Parent=FBgn0026326.1.mrna1;Target=FBgn0026326.1 1216 1372 +
Chr2	stalkie_big_nohaplotig	exon	15738960	15739345	99	+	.	ID=FBgn0026326.1.mrna1.exon8;Name=FBgn0026326.1;Parent=FBgn0026326.1.mrna1;Target=FBgn0026326.1 1373 1758 +
Chr2	stalkie_big_nohaplotig	exon	15739753	15740006	99	+	.	ID=FBgn0026326.1.mrna1.exon9;Name=FBgn0026326.1;Parent=FBgn0026326.1.mrna1;Target=FBgn0026326.1 1759 2012 +
Chr2	stalkie_big_nohaplotig	exon	15740081	15740285	99	+	.	ID=FBgn0026326.1.mrna1.exon10;Name=FBgn0026326.1;Parent=FBgn0026326.1.mrna1;Target=FBgn0026326.1 2013 2217 +
Chr2	stalkie_big_nohaplotig	CDS	15737115	15737241	99	+	0	ID=FBgn0026326.1.mrna1.cds1;Name=FBgn0026326.1;Parent=FBgn0026326.1.mrna1;Target=FBgn0026326.1 1 127 +
Chr2	stalkie_big_nohaplotig	CDS	15737305	15737459	100	+	1	ID=FBgn0026326.1.mrna1.cds2;Name=FBgn0026326.1;Parent=FBgn0026326.1.mrna1;Target=FBgn0026326.1 128 282 +
Chr2	stalkie_big_nohaplotig	CDS	15737511	15737858	99	+	0	ID=FBgn0026326.1.mrna1.cds3;Name=FBgn0026326.1;Parent=FBgn0026326.1.mrna1;Target=FBgn0026326.1 283 630 +
Chr2	stalkie_big_nohaplotig	CDS	15737925	15738119	98	+	0	ID=FBgn0026326.1.mrna1.cds4;Name=FBgn0026326.1;Parent=FBgn0026326.1.mrna1;Target=FBgn0026326.1 631 825 +
Chr2	stalkie_big_nohaplotig	CDS	15738214	15738396	98	+	0	ID=FBgn0026326.1.mrna1.cds5;Name=FBgn0026326.1;Parent=FBgn0026326.1.mrna1;Target=FBgn0026326.1 826 1008 +
Chr2	stalkie_big_nohaplotig	CDS	15738461	15738667	100	+	0	ID=FBgn0026326.1.mrna1.cds6;Name=FBgn0026326.1;Parent=FBgn0026326.1.mrna1;Target=FBgn0026326.1 1009 1215 +
Chr2	stalkie_big_nohaplotig	CDS	15738730	15738886	100	+	0	ID=FBgn0026326.1.mrna1.cds7;Name=FBgn0026326.1;Parent=FBgn0026326.1.mrna1;Target=FBgn0026326.1 1216 1372 +
Chr2	stalkie_big_nohaplotig	CDS	15738960	15739345	99	+	1	ID=FBgn0026326.1.mrna1.cds8;Name=FBgn0026326.1;Parent=FBgn0026326.1.mrna1;Target=FBgn0026326.1 1373 1758 +
Chr2	stalkie_big_nohaplotig	CDS	15739753	15740006	99	+	0	ID=FBgn0026326.1.mrna1.cds9;Name=FBgn0026326.1;Parent=FBgn0026326.1.mrna1;Target=FBgn0026326.1 1759 2012 +
Chr2	stalkie_big_nohaplotig	CDS	15740081	15740285	99	+	2	ID=FBgn0026326.1.mrna1.cds10;Name=FBgn0026326.1;Parent=FBgn0026326.1.mrna1;Target=FBgn0026326.1 2013 2217 +
Chr1	stalkie_big_nohaplotig	mRNA	140491285	140492202	.	-	.	ID=FBgn0263994.mrna1;Name=FBgn0263994;Parent=FBgn0263994.path1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=912;mismatches=6;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	140491285	140492202	99	-	.	ID=FBgn0263994.mrna1.exon1;Name=FBgn0263994;Parent=FBgn0263994.mrna1;Target=FBgn0263994 918 1 .
Chr1	stalkie_big_nohaplotig	CDS	140491285	140492202	99	-	0	ID=FBgn0263994.mrna1.cds1;Name=FBgn0263994;Parent=FBgn0263994.mrna1;Target=FBgn0263994 918 1 .
Chr1	stalkie_big_nohaplotig	mRNA	30518035	30523095	.	-	.	ID=FBgn0263392.mrna1;Name=FBgn0263392;Parent=FBgn0263392.path1;Dir=sensecoverage=99.8;identity=99.9;matches=4798;mismatches=2;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	30521360	30523095	99	-	.	ID=FBgn0263392.mrna1.exon1;Name=FBgn0263392;Parent=FBgn0263392.mrna1;Target=FBgn0263392 12 1747 +
Chr1	stalkie_big_nohaplotig	exon	30521102	30521306	100	-	.	ID=FBgn0263392.mrna1.exon2;Name=FBgn0263392;Parent=FBgn0263392.mrna1;Target=FBgn0263392 1748 1952 +
Chr1	stalkie_big_nohaplotig	exon	30520883	30521046	100	-	.	ID=FBgn0263392.mrna1.exon3;Name=FBgn0263392;Parent=FBgn0263392.mrna1;Target=FBgn0263392 1953 2116 +
Chr1	stalkie_big_nohaplotig	exon	30520308	30520821	99	-	.	ID=FBgn0263392.mrna1.exon4;Name=FBgn0263392;Parent=FBgn0263392.mrna1;Target=FBgn0263392 2117 2630 +
Chr1	stalkie_big_nohaplotig	exon	30518035	30520215	99	-	.	ID=FBgn0263392.mrna1.exon5;Name=FBgn0263392;Parent=FBgn0263392.mrna1;Target=FBgn0263392 2631 4812 +
Chr1	stalkie_big_nohaplotig	CDS	30521360	30523094	99	-	0	ID=FBgn0263392.mrna1.cds1;Name=FBgn0263392;Parent=FBgn0263392.mrna1;Target=FBgn0263392 13 1747 +
Chr1	stalkie_big_nohaplotig	CDS	30521102	30521306	100	-	1	ID=FBgn0263392.mrna1.cds2;Name=FBgn0263392;Parent=FBgn0263392.mrna1;Target=FBgn0263392 1748 1952 +
Chr1	stalkie_big_nohaplotig	CDS	30520883	30521046	100	-	2	ID=FBgn0263392.mrna1.cds3;Name=FBgn0263392;Parent=FBgn0263392.mrna1;Target=FBgn0263392 1953 2116 +
Chr1	stalkie_big_nohaplotig	CDS	30520308	30520821	99	-	1	ID=FBgn0263392.mrna1.cds4;Name=FBgn0263392;Parent=FBgn0263392.mrna1;Target=FBgn0263392 2117 2630 +
Chr1	stalkie_big_nohaplotig	CDS	30518035	30520215	99	-	2	ID=FBgn0263392.mrna1.cds5;Name=FBgn0263392;Parent=FBgn0263392.mrna1;Target=FBgn0263392 2631 4812 +
Chr1	stalkie_big_nohaplotig	mRNA	36199751	36200864	.	+	.	ID=FBgn0025682.1.mrna1;Name=FBgn0025682.1;Parent=FBgn0025682.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1047;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	36199751	36199819	100	+	.	ID=FBgn0025682.1.mrna1.exon1;Name=FBgn0025682.1;Parent=FBgn0025682.1.mrna1;Target=FBgn0025682.1 1 69 +
Chr1	stalkie_big_nohaplotig	exon	36199884	36200864	99	+	.	ID=FBgn0025682.1.mrna1.exon2;Name=FBgn0025682.1;Parent=FBgn0025682.1.mrna1;Target=FBgn0025682.1 70 1050 +
Chr1	stalkie_big_nohaplotig	CDS	36199751	36199819	100	+	0	ID=FBgn0025682.1.mrna1.cds1;Name=FBgn0025682.1;Parent=FBgn0025682.1.mrna1;Target=FBgn0025682.1 1 69 +
Chr1	stalkie_big_nohaplotig	CDS	36199884	36200864	99	+	0	ID=FBgn0025682.1.mrna1.cds2;Name=FBgn0025682.1;Parent=FBgn0025682.1.mrna1;Target=FBgn0025682.1 70 1050 +
Chr2	stalkie_big_nohaplotig	mRNA	132298737	132303236	.	-	.	ID=FBgn0038220.1.mrna1;Name=FBgn0038220.1;Parent=FBgn0038220.1.path1;Dir=sensecoverage=94.0;identity=100.0;matches=888;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	132303036	132303236	100	-	.	ID=FBgn0038220.1.mrna1.exon1;Name=FBgn0038220.1;Parent=FBgn0038220.1.mrna1;Target=FBgn0038220.1 58 258 +
Chr2	stalkie_big_nohaplotig	exon	132299298	132299743	100	-	.	ID=FBgn0038220.1.mrna1.exon2;Name=FBgn0038220.1;Parent=FBgn0038220.1.mrna1;Target=FBgn0038220.1 259 704 +
Chr2	stalkie_big_nohaplotig	exon	132298737	132298977	100	-	.	ID=FBgn0038220.1.mrna1.exon3;Name=FBgn0038220.1;Parent=FBgn0038220.1.mrna1;Target=FBgn0038220.1 705 945 +
Chr2	stalkie_big_nohaplotig	CDS	132303036	132303236	100	-	0	ID=FBgn0038220.1.mrna1.cds1;Name=FBgn0038220.1;Parent=FBgn0038220.1.mrna1;Target=FBgn0038220.1 58 258 +
Chr2	stalkie_big_nohaplotig	CDS	132299298	132299743	100	-	0	ID=FBgn0038220.1.mrna1.cds2;Name=FBgn0038220.1;Parent=FBgn0038220.1.mrna1;Target=FBgn0038220.1 259 704 +
Chr2	stalkie_big_nohaplotig	CDS	132298737	132298977	100	-	2	ID=FBgn0038220.1.mrna1.cds3;Name=FBgn0038220.1;Parent=FBgn0038220.1.mrna1;Target=FBgn0038220.1 705 945 +
Chr2	stalkie_big_nohaplotig	mRNA	141717720	141737832	.	-	.	ID=FBgn0002922.1.mrna1;Name=FBgn0002922.1;Parent=FBgn0002922.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=864;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	141737485	141737832	100	-	.	ID=FBgn0002922.1.mrna1.exon1;Name=FBgn0002922.1;Parent=FBgn0002922.1.mrna1;Target=FBgn0002922.1 1 348 +
Chr2	stalkie_big_nohaplotig	exon	141731712	141731834	100	-	.	ID=FBgn0002922.1.mrna1.exon2;Name=FBgn0002922.1;Parent=FBgn0002922.1.mrna1;Target=FBgn0002922.1 349 471 +
Chr2	stalkie_big_nohaplotig	exon	141731576	141731650	100	-	.	ID=FBgn0002922.1.mrna1.exon3;Name=FBgn0002922.1;Parent=FBgn0002922.1.mrna1;Target=FBgn0002922.1 472 546 +
Chr2	stalkie_big_nohaplotig	exon	141718514	141718592	100	-	.	ID=FBgn0002922.1.mrna1.exon4;Name=FBgn0002922.1;Parent=FBgn0002922.1.mrna1;Target=FBgn0002922.1 547 625 +
Chr2	stalkie_big_nohaplotig	exon	141717720	141717958	100	-	.	ID=FBgn0002922.1.mrna1.exon5;Name=FBgn0002922.1;Parent=FBgn0002922.1.mrna1;Target=FBgn0002922.1 626 864 +
Chr2	stalkie_big_nohaplotig	CDS	141737485	141737832	100	-	0	ID=FBgn0002922.1.mrna1.cds1;Name=FBgn0002922.1;Parent=FBgn0002922.1.mrna1;Target=FBgn0002922.1 1 348 +
Chr2	stalkie_big_nohaplotig	CDS	141731712	141731834	100	-	0	ID=FBgn0002922.1.mrna1.cds2;Name=FBgn0002922.1;Parent=FBgn0002922.1.mrna1;Target=FBgn0002922.1 349 471 +
Chr2	stalkie_big_nohaplotig	CDS	141731576	141731650	100	-	0	ID=FBgn0002922.1.mrna1.cds3;Name=FBgn0002922.1;Parent=FBgn0002922.1.mrna1;Target=FBgn0002922.1 472 546 +
Chr2	stalkie_big_nohaplotig	CDS	141718514	141718592	100	-	0	ID=FBgn0002922.1.mrna1.cds4;Name=FBgn0002922.1;Parent=FBgn0002922.1.mrna1;Target=FBgn0002922.1 547 625 +
Chr2	stalkie_big_nohaplotig	CDS	141717720	141717958	100	-	1	ID=FBgn0002922.1.mrna1.cds5;Name=FBgn0002922.1;Parent=FBgn0002922.1.mrna1;Target=FBgn0002922.1 626 864 +
Chr2	stalkie_big_nohaplotig	mRNA	141666086	141672687	.	-	.	ID=FBgn0027512.1.mrna1;Name=FBgn0027512.1;Parent=FBgn0027512.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=3859;mismatches=7;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	141672365	141672687	99	-	.	ID=FBgn0027512.1.mrna1.exon1;Name=FBgn0027512.1;Parent=FBgn0027512.1.mrna1;Target=FBgn0027512.1 1 324 +
Chr2	stalkie_big_nohaplotig	exon	141670376	141670629	100	-	.	ID=FBgn0027512.1.mrna1.exon2;Name=FBgn0027512.1;Parent=FBgn0027512.1.mrna1;Target=FBgn0027512.1 325 578 +
Chr2	stalkie_big_nohaplotig	exon	141669857	141670311	100	-	.	ID=FBgn0027512.1.mrna1.exon3;Name=FBgn0027512.1;Parent=FBgn0027512.1.mrna1;Target=FBgn0027512.1 579 1033 +
Chr2	stalkie_big_nohaplotig	exon	141669270	141669793	100	-	.	ID=FBgn0027512.1.mrna1.exon4;Name=FBgn0027512.1;Parent=FBgn0027512.1.mrna1;Target=FBgn0027512.1 1034 1557 +
Chr2	stalkie_big_nohaplotig	exon	141669060	141669208	100	-	.	ID=FBgn0027512.1.mrna1.exon5;Name=FBgn0027512.1;Parent=FBgn0027512.1.mrna1;Target=FBgn0027512.1 1558 1706 +
Chr2	stalkie_big_nohaplotig	exon	141668577	141669000	99	-	.	ID=FBgn0027512.1.mrna1.exon6;Name=FBgn0027512.1;Parent=FBgn0027512.1.mrna1;Target=FBgn0027512.1 1707 2130 +
Chr2	stalkie_big_nohaplotig	exon	141668425	141668514	100	-	.	ID=FBgn0027512.1.mrna1.exon7;Name=FBgn0027512.1;Parent=FBgn0027512.1.mrna1;Target=FBgn0027512.1 2131 2220 +
Chr2	stalkie_big_nohaplotig	exon	141667969	141668361	99	-	.	ID=FBgn0027512.1.mrna1.exon8;Name=FBgn0027512.1;Parent=FBgn0027512.1.mrna1;Target=FBgn0027512.1 2221 2613 +
Chr2	stalkie_big_nohaplotig	exon	141667363	141667868	99	-	.	ID=FBgn0027512.1.mrna1.exon9;Name=FBgn0027512.1;Parent=FBgn0027512.1.mrna1;Target=FBgn0027512.1 2614 3119 +
Chr2	stalkie_big_nohaplotig	exon	141666966	141667303	99	-	.	ID=FBgn0027512.1.mrna1.exon10;Name=FBgn0027512.1;Parent=FBgn0027512.1.mrna1;Target=FBgn0027512.1 3120 3457 +
Chr2	stalkie_big_nohaplotig	exon	141666661	141666885	99	-	.	ID=FBgn0027512.1.mrna1.exon11;Name=FBgn0027512.1;Parent=FBgn0027512.1.mrna1;Target=FBgn0027512.1 3458 3682 +
Chr2	stalkie_big_nohaplotig	exon	141666086	141666270	100	-	.	ID=FBgn0027512.1.mrna1.exon12;Name=FBgn0027512.1;Parent=FBgn0027512.1.mrna1;Target=FBgn0027512.1 3683 3867 +
Chr2	stalkie_big_nohaplotig	CDS	141672621	141672685	96	-	0	ID=FBgn0027512.1.mrna1.cds1;Name=FBgn0027512.1;Parent=FBgn0027512.1.mrna1;Target=FBgn0027512.1 3 68 +
Chr1	stalkie_big_nohaplotig	mRNA	155583832	155593061	.	-	.	ID=FBgn0030065.1.mrna1;Name=FBgn0030065.1;Parent=FBgn0030065.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=2922;mismatches=9;indels=12;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	155592849	155593061	100	-	.	ID=FBgn0030065.1.mrna1.exon1;Name=FBgn0030065.1;Parent=FBgn0030065.1.mrna1;Target=FBgn0030065.1 1 213 +
Chr1	stalkie_big_nohaplotig	exon	155592517	155592743	99	-	.	ID=FBgn0030065.1.mrna1.exon2;Name=FBgn0030065.1;Parent=FBgn0030065.1.mrna1;Target=FBgn0030065.1 214 440 +
Chr1	stalkie_big_nohaplotig	exon	155585821	155586392	99	-	.	ID=FBgn0030065.1.mrna1.exon3;Name=FBgn0030065.1;Parent=FBgn0030065.1.mrna1;Target=FBgn0030065.1 441 1012 +
Chr1	stalkie_big_nohaplotig	exon	155583832	155585756	99	-	.	ID=FBgn0030065.1.mrna1.exon4;Name=FBgn0030065.1;Parent=FBgn0030065.1.mrna1;Target=FBgn0030065.1 1013 2937 +
Chr1	stalkie_big_nohaplotig	CDS	155592849	155593061	100	-	0	ID=FBgn0030065.1.mrna1.cds1;Name=FBgn0030065.1;Parent=FBgn0030065.1.mrna1;Target=FBgn0030065.1 1 213 +
Chr1	stalkie_big_nohaplotig	CDS	155592517	155592743	99	-	0	ID=FBgn0030065.1.mrna1.cds2;Name=FBgn0030065.1;Parent=FBgn0030065.1.mrna1;Target=FBgn0030065.1 214 440 +
Chr1	stalkie_big_nohaplotig	CDS	155585821	155586392	99	-	2	ID=FBgn0030065.1.mrna1.cds3;Name=FBgn0030065.1;Parent=FBgn0030065.1.mrna1;Target=FBgn0030065.1 441 1012 +
Chr1	stalkie_big_nohaplotig	CDS	155583832	155585756	99	-	1	ID=FBgn0030065.1.mrna1.cds4;Name=FBgn0030065.1;Parent=FBgn0030065.1.mrna1;Target=FBgn0030065.1 1013 2937 +
Chr1	stalkie_big_nohaplotig	mRNA	42851615	42852946	.	+	.	ID=FBgn0036789.1.mrna1;Name=FBgn0036789.1;Parent=FBgn0036789.1.path1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1330;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	42851615	42852946	99	+	.	ID=FBgn0036789.1.mrna1.exon1;Name=FBgn0036789.1;Parent=FBgn0036789.1.mrna1;Target=FBgn0036789.1 1332 1 .
Chr1	stalkie_big_nohaplotig	CDS	42851615	42852946	99	+	0	ID=FBgn0036789.1.mrna1.cds1;Name=FBgn0036789.1;Parent=FBgn0036789.1.mrna1;Target=FBgn0036789.1 1332 1 .
Chr1	stalkie_big_nohaplotig	mRNA	24227899	24234646	.	+	.	ID=ORF2348.mrna1;Name=ORF2348;Parent=ORF2348.path1;Dir=sensecoverage=100.0;identity=99.8;matches=871;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	24227899	24228045	99	+	.	ID=ORF2348.mrna1.exon1;Name=ORF2348;Parent=ORF2348.mrna1;Target=ORF2348 1 147 +
Chr1	stalkie_big_nohaplotig	exon	24228106	24228171	100	+	.	ID=ORF2348.mrna1.exon2;Name=ORF2348;Parent=ORF2348.mrna1;Target=ORF2348 148 213 +
Chr1	stalkie_big_nohaplotig	exon	24228329	24228373	100	+	.	ID=ORF2348.mrna1.exon3;Name=ORF2348;Parent=ORF2348.mrna1;Target=ORF2348 214 258 +
Chr1	stalkie_big_nohaplotig	exon	24228442	24228498	100	+	.	ID=ORF2348.mrna1.exon4;Name=ORF2348;Parent=ORF2348.mrna1;Target=ORF2348 259 315 +
Chr1	stalkie_big_nohaplotig	exon	24229645	24229716	100	+	.	ID=ORF2348.mrna1.exon5;Name=ORF2348;Parent=ORF2348.mrna1;Target=ORF2348 316 387 +
Chr1	stalkie_big_nohaplotig	exon	24229812	24229859	97	+	.	ID=ORF2348.mrna1.exon6;Name=ORF2348;Parent=ORF2348.mrna1;Target=ORF2348 388 435 +
Chr1	stalkie_big_nohaplotig	exon	24231344	24231391	100	+	.	ID=ORF2348.mrna1.exon7;Name=ORF2348;Parent=ORF2348.mrna1;Target=ORF2348 436 483 +
Chr1	stalkie_big_nohaplotig	exon	24231552	24231599	100	+	.	ID=ORF2348.mrna1.exon8;Name=ORF2348;Parent=ORF2348.mrna1;Target=ORF2348 484 531 +
Chr1	stalkie_big_nohaplotig	exon	24234007	24234086	100	+	.	ID=ORF2348.mrna1.exon9;Name=ORF2348;Parent=ORF2348.mrna1;Target=ORF2348 532 611 +
Chr1	stalkie_big_nohaplotig	exon	24234161	24234356	100	+	.	ID=ORF2348.mrna1.exon10;Name=ORF2348;Parent=ORF2348.mrna1;Target=ORF2348 612 807 +
Chr1	stalkie_big_nohaplotig	exon	24234581	24234646	100	+	.	ID=ORF2348.mrna1.exon11;Name=ORF2348;Parent=ORF2348.mrna1;Target=ORF2348 808 873 +
Chr1	stalkie_big_nohaplotig	CDS	24227899	24228045	99	+	0	ID=ORF2348.mrna1.cds1;Name=ORF2348;Parent=ORF2348.mrna1;Target=ORF2348 1 147 +
Chr1	stalkie_big_nohaplotig	CDS	24228106	24228171	100	+	0	ID=ORF2348.mrna1.cds2;Name=ORF2348;Parent=ORF2348.mrna1;Target=ORF2348 148 213 +
Chr1	stalkie_big_nohaplotig	CDS	24228329	24228373	100	+	0	ID=ORF2348.mrna1.cds3;Name=ORF2348;Parent=ORF2348.mrna1;Target=ORF2348 214 258 +
Chr1	stalkie_big_nohaplotig	CDS	24228442	24228498	100	+	0	ID=ORF2348.mrna1.cds4;Name=ORF2348;Parent=ORF2348.mrna1;Target=ORF2348 259 315 +
Chr1	stalkie_big_nohaplotig	CDS	24229645	24229716	100	+	0	ID=ORF2348.mrna1.cds5;Name=ORF2348;Parent=ORF2348.mrna1;Target=ORF2348 316 387 +
Chr1	stalkie_big_nohaplotig	CDS	24229812	24229859	97	+	0	ID=ORF2348.mrna1.cds6;Name=ORF2348;Parent=ORF2348.mrna1;Target=ORF2348 388 435 +
Chr1	stalkie_big_nohaplotig	CDS	24231344	24231391	100	+	0	ID=ORF2348.mrna1.cds7;Name=ORF2348;Parent=ORF2348.mrna1;Target=ORF2348 436 483 +
Chr1	stalkie_big_nohaplotig	CDS	24231552	24231599	100	+	0	ID=ORF2348.mrna1.cds8;Name=ORF2348;Parent=ORF2348.mrna1;Target=ORF2348 484 531 +
Chr1	stalkie_big_nohaplotig	CDS	24234007	24234086	100	+	0	ID=ORF2348.mrna1.cds9;Name=ORF2348;Parent=ORF2348.mrna1;Target=ORF2348 532 611 +
Chr1	stalkie_big_nohaplotig	CDS	24234161	24234356	100	+	2	ID=ORF2348.mrna1.cds10;Name=ORF2348;Parent=ORF2348.mrna1;Target=ORF2348 612 807 +
Chr1	stalkie_big_nohaplotig	CDS	24234581	24234646	100	+	0	ID=ORF2348.mrna1.cds11;Name=ORF2348;Parent=ORF2348.mrna1;Target=ORF2348 808 873 +
Chr1	stalkie_big_nohaplotig	mRNA	108203323	108204142	.	+	.	ID=ORF3158.mrna1;Name=ORF3158;Parent=ORF3158.path1;Dir=sensecoverage=100.0;identity=100.0;matches=762;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	108203323	108203399	100	+	.	ID=ORF3158.mrna1.exon1;Name=ORF3158;Parent=ORF3158.mrna1;Target=ORF3158 1 77 +
Chr1	stalkie_big_nohaplotig	exon	108203458	108204142	100	+	.	ID=ORF3158.mrna1.exon2;Name=ORF3158;Parent=ORF3158.mrna1;Target=ORF3158 78 762 +
Chr1	stalkie_big_nohaplotig	CDS	108203323	108203399	100	+	0	ID=ORF3158.mrna1.cds1;Name=ORF3158;Parent=ORF3158.mrna1;Target=ORF3158 1 77 +
Chr1	stalkie_big_nohaplotig	CDS	108203458	108204142	100	+	2	ID=ORF3158.mrna1.cds2;Name=ORF3158;Parent=ORF3158.mrna1;Target=ORF3158 78 762 +
Chr1	stalkie_big_nohaplotig	mRNA	27113988	27115573	.	-	.	ID=FBgn0010747.1.mrna1;Name=FBgn0010747.1;Parent=FBgn0010747.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1525;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	27114650	27115573	99	-	.	ID=FBgn0010747.1.mrna1.exon1;Name=FBgn0010747.1;Parent=FBgn0010747.1.mrna1;Target=FBgn0010747.1 1 924 +
Chr1	stalkie_big_nohaplotig	exon	27113988	27114593	99	-	.	ID=FBgn0010747.1.mrna1.exon2;Name=FBgn0010747.1;Parent=FBgn0010747.1.mrna1;Target=FBgn0010747.1 925 1530 +
Chr1	stalkie_big_nohaplotig	CDS	27114650	27115573	99	-	0	ID=FBgn0010747.1.mrna1.cds1;Name=FBgn0010747.1;Parent=FBgn0010747.1.mrna1;Target=FBgn0010747.1 1 924 +
Chr1	stalkie_big_nohaplotig	CDS	27113988	27114593	99	-	0	ID=FBgn0010747.1.mrna1.cds2;Name=FBgn0010747.1;Parent=FBgn0010747.1.mrna1;Target=FBgn0010747.1 925 1530 +
Chr2	stalkie_big_nohaplotig	mRNA	53482188	53485191	.	-	.	ID=ORF658.mrna1;Name=ORF658;Parent=ORF658.path1;Dir=sensecoverage=90.4;identity=98.7;matches=1389;mismatches=18;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	53485151	53485191	100	-	.	ID=ORF658.mrna1.exon1;Name=ORF658;Parent=ORF658.mrna1;Target=ORF658 1 41 +
Chr2	stalkie_big_nohaplotig	exon	53482188	53483553	98	-	.	ID=ORF658.mrna1.exon2;Name=ORF658;Parent=ORF658.mrna1;Target=ORF658 42 1407 +
Chr2	stalkie_big_nohaplotig	CDS	53485151	53485191	100	-	0	ID=ORF658.mrna1.cds1;Name=ORF658;Parent=ORF658.mrna1;Target=ORF658 1 41 +
Chr2	stalkie_big_nohaplotig	CDS	53482188	53483553	98	-	2	ID=ORF658.mrna1.cds2;Name=ORF658;Parent=ORF658.mrna1;Target=ORF658 42 1407 +
Chr2	stalkie_big_nohaplotig	mRNA	8625494	8626342	.	-	.	ID=FBgn0050410.1.mrna1;Name=FBgn0050410.1;Parent=FBgn0050410.1.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=849;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	8625494	8626342	100	-	.	ID=FBgn0050410.1.mrna1.exon1;Name=FBgn0050410.1;Parent=FBgn0050410.1.mrna1;Target=FBgn0050410.1 849 1 .
Chr2	stalkie_big_nohaplotig	CDS	8625494	8626342	100	-	0	ID=FBgn0050410.1.mrna1.cds1;Name=FBgn0050410.1;Parent=FBgn0050410.1.mrna1;Target=FBgn0050410.1 849 1 .
Chr1	stalkie_big_nohaplotig	mRNA	141938984	141941043	.	+	.	ID=FBgn0028397.1.mrna1;Name=FBgn0028397.1;Parent=FBgn0028397.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1538;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	141938984	141939181	100	+	.	ID=FBgn0028397.1.mrna1.exon1;Name=FBgn0028397.1;Parent=FBgn0028397.1.mrna1;Target=FBgn0028397.1 1 198 +
Chr1	stalkie_big_nohaplotig	exon	141939251	141939427	100	+	.	ID=FBgn0028397.1.mrna1.exon2;Name=FBgn0028397.1;Parent=FBgn0028397.1.mrna1;Target=FBgn0028397.1 199 375 +
Chr1	stalkie_big_nohaplotig	exon	141939491	141939837	100	+	.	ID=FBgn0028397.1.mrna1.exon3;Name=FBgn0028397.1;Parent=FBgn0028397.1.mrna1;Target=FBgn0028397.1 376 722 +
Chr1	stalkie_big_nohaplotig	exon	141940227	141941043	99	+	.	ID=FBgn0028397.1.mrna1.exon4;Name=FBgn0028397.1;Parent=FBgn0028397.1.mrna1;Target=FBgn0028397.1 723 1539 +
Chr1	stalkie_big_nohaplotig	CDS	141938984	141939181	100	+	0	ID=FBgn0028397.1.mrna1.cds1;Name=FBgn0028397.1;Parent=FBgn0028397.1.mrna1;Target=FBgn0028397.1 1 198 +
Chr1	stalkie_big_nohaplotig	CDS	141939251	141939427	100	+	0	ID=FBgn0028397.1.mrna1.cds2;Name=FBgn0028397.1;Parent=FBgn0028397.1.mrna1;Target=FBgn0028397.1 199 375 +
Chr1	stalkie_big_nohaplotig	CDS	141939491	141939837	100	+	0	ID=FBgn0028397.1.mrna1.cds3;Name=FBgn0028397.1;Parent=FBgn0028397.1.mrna1;Target=FBgn0028397.1 376 722 +
Chr1	stalkie_big_nohaplotig	CDS	141940227	141941043	99	+	2	ID=FBgn0028397.1.mrna1.cds4;Name=FBgn0028397.1;Parent=FBgn0028397.1.mrna1;Target=FBgn0028397.1 723 1539 +
Chr2	stalkie_big_nohaplotig	mRNA	83624516	83625953	.	-	.	ID=FBgn0037880.1.mrna1;Name=FBgn0037880.1;Parent=FBgn0037880.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1272;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	83625657	83625953	100	-	.	ID=FBgn0037880.1.mrna1.exon1;Name=FBgn0037880.1;Parent=FBgn0037880.1.mrna1;Target=FBgn0037880.1 1 297 +
Chr2	stalkie_big_nohaplotig	exon	83624963	83625595	100	-	.	ID=FBgn0037880.1.mrna1.exon2;Name=FBgn0037880.1;Parent=FBgn0037880.1.mrna1;Target=FBgn0037880.1 298 930 +
Chr2	stalkie_big_nohaplotig	exon	83624728	83624907	100	-	.	ID=FBgn0037880.1.mrna1.exon3;Name=FBgn0037880.1;Parent=FBgn0037880.1.mrna1;Target=FBgn0037880.1 931 1110 +
Chr2	stalkie_big_nohaplotig	exon	83624516	83624677	100	-	.	ID=FBgn0037880.1.mrna1.exon4;Name=FBgn0037880.1;Parent=FBgn0037880.1.mrna1;Target=FBgn0037880.1 1111 1272 +
Chr2	stalkie_big_nohaplotig	CDS	83625657	83625953	100	-	0	ID=FBgn0037880.1.mrna1.cds1;Name=FBgn0037880.1;Parent=FBgn0037880.1.mrna1;Target=FBgn0037880.1 1 297 +
Chr2	stalkie_big_nohaplotig	CDS	83624963	83625595	100	-	0	ID=FBgn0037880.1.mrna1.cds2;Name=FBgn0037880.1;Parent=FBgn0037880.1.mrna1;Target=FBgn0037880.1 298 930 +
Chr2	stalkie_big_nohaplotig	CDS	83624728	83624907	100	-	0	ID=FBgn0037880.1.mrna1.cds3;Name=FBgn0037880.1;Parent=FBgn0037880.1.mrna1;Target=FBgn0037880.1 931 1110 +
Chr2	stalkie_big_nohaplotig	CDS	83624516	83624677	100	-	0	ID=FBgn0037880.1.mrna1.cds4;Name=FBgn0037880.1;Parent=FBgn0037880.1.mrna1;Target=FBgn0037880.1 1111 1272 +
ChrX	stalkie_big_nohaplotig	mRNA	87328591	87330803	.	-	.	ID=FBgn0032514.1.mrna1;Name=FBgn0032514.1;Parent=FBgn0032514.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1611;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	87330762	87330803	100	-	.	ID=FBgn0032514.1.mrna1.exon1;Name=FBgn0032514.1;Parent=FBgn0032514.1.mrna1;Target=FBgn0032514.1 1 42 +
ChrX	stalkie_big_nohaplotig	exon	87329987	87330644	100	-	.	ID=FBgn0032514.1.mrna1.exon2;Name=FBgn0032514.1;Parent=FBgn0032514.1.mrna1;Target=FBgn0032514.1 43 700 +
ChrX	stalkie_big_nohaplotig	exon	87328944	87329558	100	-	.	ID=FBgn0032514.1.mrna1.exon3;Name=FBgn0032514.1;Parent=FBgn0032514.1.mrna1;Target=FBgn0032514.1 701 1315 +
ChrX	stalkie_big_nohaplotig	exon	87328591	87328886	100	-	.	ID=FBgn0032514.1.mrna1.exon4;Name=FBgn0032514.1;Parent=FBgn0032514.1.mrna1;Target=FBgn0032514.1 1316 1611 +
ChrX	stalkie_big_nohaplotig	CDS	87330762	87330803	100	-	0	ID=FBgn0032514.1.mrna1.cds1;Name=FBgn0032514.1;Parent=FBgn0032514.1.mrna1;Target=FBgn0032514.1 1 42 +
ChrX	stalkie_big_nohaplotig	CDS	87329987	87330644	100	-	0	ID=FBgn0032514.1.mrna1.cds2;Name=FBgn0032514.1;Parent=FBgn0032514.1.mrna1;Target=FBgn0032514.1 43 700 +
ChrX	stalkie_big_nohaplotig	CDS	87328944	87329558	100	-	1	ID=FBgn0032514.1.mrna1.cds3;Name=FBgn0032514.1;Parent=FBgn0032514.1.mrna1;Target=FBgn0032514.1 701 1315 +
ChrX	stalkie_big_nohaplotig	CDS	87328591	87328886	100	-	1	ID=FBgn0032514.1.mrna1.cds4;Name=FBgn0032514.1;Parent=FBgn0032514.1.mrna1;Target=FBgn0032514.1 1316 1611 +
Chr2	stalkie_big_nohaplotig	mRNA	160217147	160217800	.	-	.	ID=FBgn0033153.1.mrna1;Name=FBgn0033153.1;Parent=FBgn0033153.1.path1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=651;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	160217147	160217800	99	-	.	ID=FBgn0033153.1.mrna1.exon1;Name=FBgn0033153.1;Parent=FBgn0033153.1.mrna1;Target=FBgn0033153.1 654 1 .
Chr2	stalkie_big_nohaplotig	CDS	160217147	160217800	99	-	0	ID=FBgn0033153.1.mrna1.cds1;Name=FBgn0033153.1;Parent=FBgn0033153.1.mrna1;Target=FBgn0033153.1 654 1 .
Chr2	stalkie_big_nohaplotig	mRNA	63001579	63002574	.	-	.	ID=FBgn0037852.1.mrna1;Name=FBgn0037852.1;Parent=FBgn0037852.1.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=995;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	63001579	63002574	99	-	.	ID=FBgn0037852.1.mrna1.exon1;Name=FBgn0037852.1;Parent=FBgn0037852.1.mrna1;Target=FBgn0037852.1 996 1 .
Chr2	stalkie_big_nohaplotig	CDS	63001579	63002574	99	-	0	ID=FBgn0037852.1.mrna1.cds1;Name=FBgn0037852.1;Parent=FBgn0037852.1.mrna1;Target=FBgn0037852.1 996 1 .
Chr1	stalkie_big_nohaplotig	mRNA	18631202	18634027	.	+	.	ID=FBgn0029173.3.mrna1;Name=FBgn0029173.3;Parent=FBgn0029173.3.path1;Dir=sensecoverage=100.0;identity=99.6;matches=2357;mismatches=10;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	18631202	18631427	100	+	.	ID=FBgn0029173.3.mrna1.exon1;Name=FBgn0029173.3;Parent=FBgn0029173.3.mrna1;Target=FBgn0029173.3 1 226 +
Chr1	stalkie_big_nohaplotig	exon	18631509	18632010	100	+	.	ID=FBgn0029173.3.mrna1.exon2;Name=FBgn0029173.3;Parent=FBgn0029173.3.mrna1;Target=FBgn0029173.3 227 728 +
Chr1	stalkie_big_nohaplotig	exon	18632389	18634027	99	+	.	ID=FBgn0029173.3.mrna1.exon3;Name=FBgn0029173.3;Parent=FBgn0029173.3.mrna1;Target=FBgn0029173.3 729 2367 +
Chr1	stalkie_big_nohaplotig	CDS	18631202	18631427	100	+	0	ID=FBgn0029173.3.mrna1.cds1;Name=FBgn0029173.3;Parent=FBgn0029173.3.mrna1;Target=FBgn0029173.3 1 226 +
Chr1	stalkie_big_nohaplotig	CDS	18631509	18632010	100	+	1	ID=FBgn0029173.3.mrna1.cds2;Name=FBgn0029173.3;Parent=FBgn0029173.3.mrna1;Target=FBgn0029173.3 227 728 +
Chr1	stalkie_big_nohaplotig	CDS	18632389	18634027	99	+	2	ID=FBgn0029173.3.mrna1.cds3;Name=FBgn0029173.3;Parent=FBgn0029173.3.mrna1;Target=FBgn0029173.3 729 2367 +
Chr2	stalkie_big_nohaplotig	mRNA	80404783	80407779	.	-	.	ID=FBgn0261641.1.mrna1;Name=FBgn0261641.1;Parent=FBgn0261641.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2337;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	80407619	80407779	100	-	.	ID=FBgn0261641.1.mrna1.exon1;Name=FBgn0261641.1;Parent=FBgn0261641.1.mrna1;Target=FBgn0261641.1 1 161 +
Chr2	stalkie_big_nohaplotig	exon	80405950	80407553	100	-	.	ID=FBgn0261641.1.mrna1.exon2;Name=FBgn0261641.1;Parent=FBgn0261641.1.mrna1;Target=FBgn0261641.1 162 1765 +
Chr2	stalkie_big_nohaplotig	exon	80405762	80405892	100	-	.	ID=FBgn0261641.1.mrna1.exon3;Name=FBgn0261641.1;Parent=FBgn0261641.1.mrna1;Target=FBgn0261641.1 1766 1896 +
Chr2	stalkie_big_nohaplotig	exon	80405478	80405686	100	-	.	ID=FBgn0261641.1.mrna1.exon4;Name=FBgn0261641.1;Parent=FBgn0261641.1.mrna1;Target=FBgn0261641.1 1897 2105 +
Chr2	stalkie_big_nohaplotig	exon	80405263	80405413	100	-	.	ID=FBgn0261641.1.mrna1.exon5;Name=FBgn0261641.1;Parent=FBgn0261641.1.mrna1;Target=FBgn0261641.1 2106 2256 +
Chr2	stalkie_big_nohaplotig	exon	80404965	80404982	100	-	.	ID=FBgn0261641.1.mrna1.exon6;Name=FBgn0261641.1;Parent=FBgn0261641.1.mrna1;Target=FBgn0261641.1 2257 2274 +
Chr2	stalkie_big_nohaplotig	exon	80404783	80404845	100	-	.	ID=FBgn0261641.1.mrna1.exon7;Name=FBgn0261641.1;Parent=FBgn0261641.1.mrna1;Target=FBgn0261641.1 2275 2337 +
Chr2	stalkie_big_nohaplotig	CDS	80407619	80407779	100	-	0	ID=FBgn0261641.1.mrna1.cds1;Name=FBgn0261641.1;Parent=FBgn0261641.1.mrna1;Target=FBgn0261641.1 1 161 +
Chr2	stalkie_big_nohaplotig	CDS	80405950	80407553	100	-	2	ID=FBgn0261641.1.mrna1.cds2;Name=FBgn0261641.1;Parent=FBgn0261641.1.mrna1;Target=FBgn0261641.1 162 1765 +
Chr2	stalkie_big_nohaplotig	CDS	80405762	80405892	100	-	1	ID=FBgn0261641.1.mrna1.cds3;Name=FBgn0261641.1;Parent=FBgn0261641.1.mrna1;Target=FBgn0261641.1 1766 1896 +
Chr2	stalkie_big_nohaplotig	CDS	80405478	80405686	100	-	0	ID=FBgn0261641.1.mrna1.cds4;Name=FBgn0261641.1;Parent=FBgn0261641.1.mrna1;Target=FBgn0261641.1 1897 2105 +
Chr2	stalkie_big_nohaplotig	CDS	80405263	80405413	100	-	2	ID=FBgn0261641.1.mrna1.cds5;Name=FBgn0261641.1;Parent=FBgn0261641.1.mrna1;Target=FBgn0261641.1 2106 2256 +
Chr2	stalkie_big_nohaplotig	CDS	80404965	80404982	100	-	0	ID=FBgn0261641.1.mrna1.cds6;Name=FBgn0261641.1;Parent=FBgn0261641.1.mrna1;Target=FBgn0261641.1 2257 2274 +
Chr2	stalkie_big_nohaplotig	CDS	80404783	80404845	100	-	0	ID=FBgn0261641.1.mrna1.cds7;Name=FBgn0261641.1;Parent=FBgn0261641.1.mrna1;Target=FBgn0261641.1 2275 2337 +
Chr2	stalkie_big_nohaplotig	mRNA	59736659	59906751	.	-	.	ID=FBgn0085421.1.mrna1;Name=FBgn0085421.1;Parent=FBgn0085421.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=3040;mismatches=7;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	59906684	59906751	100	-	.	ID=FBgn0085421.1.mrna1.exon1;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 1 68 +
Chr2	stalkie_big_nohaplotig	exon	59886830	59886972	99	-	.	ID=FBgn0085421.1.mrna1.exon2;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 69 211 +
Chr2	stalkie_big_nohaplotig	exon	59886439	59886530	100	-	.	ID=FBgn0085421.1.mrna1.exon3;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 212 303 +
Chr2	stalkie_big_nohaplotig	exon	59794779	59794925	100	-	.	ID=FBgn0085421.1.mrna1.exon4;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 304 450 +
Chr2	stalkie_big_nohaplotig	exon	59776063	59776114	98	-	.	ID=FBgn0085421.1.mrna1.exon5;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 451 502 +
Chr2	stalkie_big_nohaplotig	exon	59768823	59768914	100	-	.	ID=FBgn0085421.1.mrna1.exon6;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 503 594 +
Chr2	stalkie_big_nohaplotig	exon	59768053	59768139	100	-	.	ID=FBgn0085421.1.mrna1.exon7;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 595 681 +
Chr2	stalkie_big_nohaplotig	exon	59767646	59767787	100	-	.	ID=FBgn0085421.1.mrna1.exon8;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 682 823 +
Chr2	stalkie_big_nohaplotig	exon	59765520	59765700	100	-	.	ID=FBgn0085421.1.mrna1.exon9;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 824 1004 +
Chr2	stalkie_big_nohaplotig	exon	59763685	59763830	100	-	.	ID=FBgn0085421.1.mrna1.exon10;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 1005 1150 +
Chr2	stalkie_big_nohaplotig	exon	59759636	59759780	100	-	.	ID=FBgn0085421.1.mrna1.exon11;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 1151 1295 +
Chr2	stalkie_big_nohaplotig	exon	59751019	59751195	100	-	.	ID=FBgn0085421.1.mrna1.exon12;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 1296 1472 +
Chr2	stalkie_big_nohaplotig	exon	59748651	59748812	100	-	.	ID=FBgn0085421.1.mrna1.exon13;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 1473 1634 +
Chr2	stalkie_big_nohaplotig	exon	59743711	59743864	100	-	.	ID=FBgn0085421.1.mrna1.exon14;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 1635 1788 +
Chr2	stalkie_big_nohaplotig	exon	59743421	59743628	100	-	.	ID=FBgn0085421.1.mrna1.exon15;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 1789 1996 +
Chr2	stalkie_big_nohaplotig	exon	59742765	59743018	99	-	.	ID=FBgn0085421.1.mrna1.exon16;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 1997 2250 +
Chr2	stalkie_big_nohaplotig	exon	59742535	59742705	99	-	.	ID=FBgn0085421.1.mrna1.exon17;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 2251 2421 +
Chr2	stalkie_big_nohaplotig	exon	59737511	59737644	100	-	.	ID=FBgn0085421.1.mrna1.exon18;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 2422 2555 +
Chr2	stalkie_big_nohaplotig	exon	59736866	59737215	99	-	.	ID=FBgn0085421.1.mrna1.exon19;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 2556 2905 +
Chr2	stalkie_big_nohaplotig	exon	59736659	59736800	98	-	.	ID=FBgn0085421.1.mrna1.exon20;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 2906 3048 +
Chr2	stalkie_big_nohaplotig	CDS	59906684	59906751	100	-	0	ID=FBgn0085421.1.mrna1.cds1;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 1 68 +
Chr2	stalkie_big_nohaplotig	CDS	59886830	59886972	99	-	2	ID=FBgn0085421.1.mrna1.cds2;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 69 211 +
Chr2	stalkie_big_nohaplotig	CDS	59886439	59886530	100	-	1	ID=FBgn0085421.1.mrna1.cds3;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 212 303 +
Chr2	stalkie_big_nohaplotig	CDS	59794779	59794925	100	-	0	ID=FBgn0085421.1.mrna1.cds4;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 304 450 +
Chr2	stalkie_big_nohaplotig	CDS	59776063	59776114	98	-	0	ID=FBgn0085421.1.mrna1.cds5;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 451 502 +
Chr2	stalkie_big_nohaplotig	CDS	59768823	59768914	100	-	1	ID=FBgn0085421.1.mrna1.cds6;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 503 594 +
Chr2	stalkie_big_nohaplotig	CDS	59768053	59768139	100	-	0	ID=FBgn0085421.1.mrna1.cds7;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 595 681 +
Chr2	stalkie_big_nohaplotig	CDS	59767646	59767787	100	-	0	ID=FBgn0085421.1.mrna1.cds8;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 682 823 +
Chr2	stalkie_big_nohaplotig	CDS	59765520	59765700	100	-	1	ID=FBgn0085421.1.mrna1.cds9;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 824 1004 +
Chr2	stalkie_big_nohaplotig	CDS	59763685	59763830	100	-	2	ID=FBgn0085421.1.mrna1.cds10;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 1005 1150 +
Chr2	stalkie_big_nohaplotig	CDS	59759636	59759780	100	-	1	ID=FBgn0085421.1.mrna1.cds11;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 1151 1295 +
Chr2	stalkie_big_nohaplotig	CDS	59751019	59751195	100	-	2	ID=FBgn0085421.1.mrna1.cds12;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 1296 1472 +
Chr2	stalkie_big_nohaplotig	CDS	59748651	59748812	100	-	2	ID=FBgn0085421.1.mrna1.cds13;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 1473 1634 +
Chr2	stalkie_big_nohaplotig	CDS	59743711	59743864	100	-	2	ID=FBgn0085421.1.mrna1.cds14;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 1635 1788 +
Chr2	stalkie_big_nohaplotig	CDS	59743421	59743628	100	-	0	ID=FBgn0085421.1.mrna1.cds15;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 1789 1996 +
Chr2	stalkie_big_nohaplotig	CDS	59742765	59743018	99	-	1	ID=FBgn0085421.1.mrna1.cds16;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 1997 2250 +
Chr2	stalkie_big_nohaplotig	CDS	59742535	59742705	99	-	0	ID=FBgn0085421.1.mrna1.cds17;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 2251 2421 +
Chr2	stalkie_big_nohaplotig	CDS	59737511	59737644	100	-	0	ID=FBgn0085421.1.mrna1.cds18;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 2422 2555 +
Chr2	stalkie_big_nohaplotig	CDS	59736866	59737215	99	-	2	ID=FBgn0085421.1.mrna1.cds19;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 2556 2905 +
Chr2	stalkie_big_nohaplotig	CDS	59736659	59736800	98	-	1	ID=FBgn0085421.1.mrna1.cds20;Name=FBgn0085421.1;Parent=FBgn0085421.1.mrna1;Target=FBgn0085421.1 2906 3048 +
Chr1	stalkie_big_nohaplotig	mRNA	26887058	26887959	.	-	.	ID=FBgn0002283.1.mrna1;Name=FBgn0002283.1;Parent=FBgn0002283.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=699;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	26887821	26887959	100	-	.	ID=FBgn0002283.1.mrna1.exon1;Name=FBgn0002283.1;Parent=FBgn0002283.1.mrna1;Target=FBgn0002283.1 1 139 +
Chr1	stalkie_big_nohaplotig	exon	26887596	26887748	100	-	.	ID=FBgn0002283.1.mrna1.exon2;Name=FBgn0002283.1;Parent=FBgn0002283.1.mrna1;Target=FBgn0002283.1 140 292 +
Chr1	stalkie_big_nohaplotig	exon	26887237	26887520	100	-	.	ID=FBgn0002283.1.mrna1.exon3;Name=FBgn0002283.1;Parent=FBgn0002283.1.mrna1;Target=FBgn0002283.1 293 576 +
Chr1	stalkie_big_nohaplotig	exon	26887058	26887180	100	-	.	ID=FBgn0002283.1.mrna1.exon4;Name=FBgn0002283.1;Parent=FBgn0002283.1.mrna1;Target=FBgn0002283.1 577 699 +
Chr1	stalkie_big_nohaplotig	CDS	26887821	26887959	100	-	0	ID=FBgn0002283.1.mrna1.cds1;Name=FBgn0002283.1;Parent=FBgn0002283.1.mrna1;Target=FBgn0002283.1 1 139 +
Chr1	stalkie_big_nohaplotig	CDS	26887596	26887748	100	-	1	ID=FBgn0002283.1.mrna1.cds2;Name=FBgn0002283.1;Parent=FBgn0002283.1.mrna1;Target=FBgn0002283.1 140 292 +
Chr1	stalkie_big_nohaplotig	CDS	26887237	26887520	100	-	1	ID=FBgn0002283.1.mrna1.cds3;Name=FBgn0002283.1;Parent=FBgn0002283.1.mrna1;Target=FBgn0002283.1 293 576 +
Chr1	stalkie_big_nohaplotig	CDS	26887058	26887180	100	-	0	ID=FBgn0002283.1.mrna1.cds4;Name=FBgn0002283.1;Parent=FBgn0002283.1.mrna1;Target=FBgn0002283.1 577 699 +
Chr1	stalkie_big_nohaplotig	mRNA	26899322	26901708	.	-	.	ID=FBgn0035690.2.mrna1;Name=FBgn0035690.2;Parent=FBgn0035690.2.path1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=2379;mismatches=8;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	26899322	26901708	99	-	.	ID=FBgn0035690.2.mrna1.exon1;Name=FBgn0035690.2;Parent=FBgn0035690.2.mrna1;Target=FBgn0035690.2 2388 1 .
Chr1	stalkie_big_nohaplotig	CDS	26901567	26901706	98	-	0	ID=FBgn0035690.2.mrna1.cds1;Name=FBgn0035690.2;Parent=FBgn0035690.2.mrna1;Target=FBgn0035690.2 143 3 .
Chr2	stalkie_big_nohaplotig	mRNA	159718804	159719974	.	+	.	ID=FBgn0038003.2.mrna1;Name=FBgn0038003.2;Parent=FBgn0038003.2.path1;Dir=sensecoverage=100.0;identity=99.3;matches=897;mismatches=6;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	159718804	159719541	99	+	.	ID=FBgn0038003.2.mrna1.exon1;Name=FBgn0038003.2;Parent=FBgn0038003.2.mrna1;Target=FBgn0038003.2 1 738 +
Chr2	stalkie_big_nohaplotig	exon	159719810	159719974	100	+	.	ID=FBgn0038003.2.mrna1.exon2;Name=FBgn0038003.2;Parent=FBgn0038003.2.mrna1;Target=FBgn0038003.2 739 903 +
Chr2	stalkie_big_nohaplotig	CDS	159718804	159719541	99	+	0	ID=FBgn0038003.2.mrna1.cds1;Name=FBgn0038003.2;Parent=FBgn0038003.2.mrna1;Target=FBgn0038003.2 1 738 +
Chr2	stalkie_big_nohaplotig	CDS	159719810	159719974	100	+	0	ID=FBgn0038003.2.mrna1.cds2;Name=FBgn0038003.2;Parent=FBgn0038003.2.mrna1;Target=FBgn0038003.2 739 903 +
Chr2	stalkie_big_nohaplotig	mRNA	11857630	11867956	.	-	.	ID=FBgn0034876.1.mrna1;Name=FBgn0034876.1;Parent=FBgn0034876.1.path1;Dir=sensecoverage=99.7;identity=99.7;matches=1032;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	11867785	11867956	100	-	.	ID=FBgn0034876.1.mrna1.exon1;Name=FBgn0034876.1;Parent=FBgn0034876.1.mrna1;Target=FBgn0034876.1 4 175 +
Chr2	stalkie_big_nohaplotig	exon	11857889	11858554	99	-	.	ID=FBgn0034876.1.mrna1.exon2;Name=FBgn0034876.1;Parent=FBgn0034876.1.mrna1;Target=FBgn0034876.1 176 841 +
Chr2	stalkie_big_nohaplotig	exon	11857630	11857826	100	-	.	ID=FBgn0034876.1.mrna1.exon3;Name=FBgn0034876.1;Parent=FBgn0034876.1.mrna1;Target=FBgn0034876.1 842 1038 +
Chr2	stalkie_big_nohaplotig	CDS	11867785	11867956	100	-	0	ID=FBgn0034876.1.mrna1.cds1;Name=FBgn0034876.1;Parent=FBgn0034876.1.mrna1;Target=FBgn0034876.1 4 175 +
Chr2	stalkie_big_nohaplotig	CDS	11857889	11858554	99	-	1	ID=FBgn0034876.1.mrna1.cds2;Name=FBgn0034876.1;Parent=FBgn0034876.1.mrna1;Target=FBgn0034876.1 176 841 +
Chr2	stalkie_big_nohaplotig	CDS	11857630	11857826	100	-	1	ID=FBgn0034876.1.mrna1.cds3;Name=FBgn0034876.1;Parent=FBgn0034876.1.mrna1;Target=FBgn0034876.1 842 1038 +
Chr2	stalkie_big_nohaplotig	mRNA	140041827	140045629	.	+	.	ID=ORF35.mrna1;Name=ORF35;Parent=ORF35.path1;Dir=sensecoverage=100.0;identity=99.0;matches=3701;mismatches=37;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	140041827	140043786	98	+	.	ID=ORF35.mrna1.exon1;Name=ORF35;Parent=ORF35.mrna1;Target=ORF35 1 1960 +
Chr2	stalkie_big_nohaplotig	exon	140043852	140045629	99	+	.	ID=ORF35.mrna1.exon2;Name=ORF35;Parent=ORF35.mrna1;Target=ORF35 1961 3738 +
Chr2	stalkie_big_nohaplotig	CDS	140041827	140043786	98	+	0	ID=ORF35.mrna1.cds1;Name=ORF35;Parent=ORF35.mrna1;Target=ORF35 1 1960 +
Chr2	stalkie_big_nohaplotig	CDS	140043852	140045629	99	+	1	ID=ORF35.mrna1.cds2;Name=ORF35;Parent=ORF35.mrna1;Target=ORF35 1961 3738 +
Chr2	stalkie_big_nohaplotig	mRNA	131299628	131320018	.	+	.	ID=FBgn0259736.1.mrna1;Name=FBgn0259736.1;Parent=FBgn0259736.1.path1;Dir=sensecoverage=99.9;identity=99.7;matches=5029;mismatches=13;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	131299628	131302586	99	+	.	ID=FBgn0259736.1.mrna1.exon1;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 5 2963 +
Chr2	stalkie_big_nohaplotig	exon	131312493	131312632	100	+	.	ID=FBgn0259736.1.mrna1.exon2;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 2964 3103 +
Chr2	stalkie_big_nohaplotig	exon	131312720	131312854	99	+	.	ID=FBgn0259736.1.mrna1.exon3;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 3104 3238 +
Chr2	stalkie_big_nohaplotig	exon	131313561	131313818	100	+	.	ID=FBgn0259736.1.mrna1.exon4;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 3239 3496 +
Chr2	stalkie_big_nohaplotig	exon	131313888	131314227	100	+	.	ID=FBgn0259736.1.mrna1.exon5;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 3497 3836 +
Chr2	stalkie_big_nohaplotig	exon	131314637	131314723	100	+	.	ID=FBgn0259736.1.mrna1.exon6;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 3837 3923 +
Chr2	stalkie_big_nohaplotig	exon	131314815	131314965	100	+	.	ID=FBgn0259736.1.mrna1.exon7;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 3924 4074 +
Chr2	stalkie_big_nohaplotig	exon	131315822	131315987	99	+	.	ID=FBgn0259736.1.mrna1.exon8;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 4075 4240 +
Chr2	stalkie_big_nohaplotig	exon	131316051	131316194	98	+	.	ID=FBgn0259736.1.mrna1.exon9;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 4241 4384 +
Chr2	stalkie_big_nohaplotig	exon	131316281	131316380	100	+	.	ID=FBgn0259736.1.mrna1.exon10;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 4385 4484 +
Chr2	stalkie_big_nohaplotig	exon	131319168	131319311	99	+	.	ID=FBgn0259736.1.mrna1.exon11;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 4485 4628 +
Chr2	stalkie_big_nohaplotig	exon	131319601	131320018	99	+	.	ID=FBgn0259736.1.mrna1.exon12;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 4629 5046 +
Chr2	stalkie_big_nohaplotig	CDS	131299630	131302586	99	+	0	ID=FBgn0259736.1.mrna1.cds1;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 7 2963 +
Chr2	stalkie_big_nohaplotig	CDS	131312493	131312632	100	+	2	ID=FBgn0259736.1.mrna1.cds2;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 2964 3103 +
Chr2	stalkie_big_nohaplotig	CDS	131312720	131312854	99	+	1	ID=FBgn0259736.1.mrna1.cds3;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 3104 3238 +
Chr2	stalkie_big_nohaplotig	CDS	131313561	131313818	100	+	1	ID=FBgn0259736.1.mrna1.cds4;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 3239 3496 +
Chr2	stalkie_big_nohaplotig	CDS	131313888	131314227	100	+	1	ID=FBgn0259736.1.mrna1.cds5;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 3497 3836 +
Chr2	stalkie_big_nohaplotig	CDS	131314637	131314723	100	+	2	ID=FBgn0259736.1.mrna1.cds6;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 3837 3923 +
Chr2	stalkie_big_nohaplotig	CDS	131314815	131314965	100	+	2	ID=FBgn0259736.1.mrna1.cds7;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 3924 4074 +
Chr2	stalkie_big_nohaplotig	CDS	131315822	131315987	99	+	0	ID=FBgn0259736.1.mrna1.cds8;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 4075 4240 +
Chr2	stalkie_big_nohaplotig	CDS	131316051	131316194	98	+	1	ID=FBgn0259736.1.mrna1.cds9;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 4241 4384 +
Chr2	stalkie_big_nohaplotig	CDS	131316281	131316380	100	+	1	ID=FBgn0259736.1.mrna1.cds10;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 4385 4484 +
Chr2	stalkie_big_nohaplotig	CDS	131319168	131319311	99	+	2	ID=FBgn0259736.1.mrna1.cds11;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 4485 4628 +
Chr2	stalkie_big_nohaplotig	CDS	131319601	131320018	99	+	2	ID=FBgn0259736.1.mrna1.cds12;Name=FBgn0259736.1;Parent=FBgn0259736.1.mrna1;Target=FBgn0259736.1 4629 5046 +
Chr2	stalkie_big_nohaplotig	mRNA	138783545	138806349	.	+	.	ID=FBgn0038803.1.mrna1;Name=FBgn0038803.1;Parent=FBgn0038803.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1656;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	138783545	138783805	99	+	.	ID=FBgn0038803.1.mrna1.exon1;Name=FBgn0038803.1;Parent=FBgn0038803.1.mrna1;Target=FBgn0038803.1 1 261 +
Chr2	stalkie_big_nohaplotig	exon	138804952	138806349	99	+	.	ID=FBgn0038803.1.mrna1.exon2;Name=FBgn0038803.1;Parent=FBgn0038803.1.mrna1;Target=FBgn0038803.1 262 1659 +
Chr2	stalkie_big_nohaplotig	CDS	138783545	138783805	99	+	0	ID=FBgn0038803.1.mrna1.cds1;Name=FBgn0038803.1;Parent=FBgn0038803.1.mrna1;Target=FBgn0038803.1 1 261 +
Chr2	stalkie_big_nohaplotig	CDS	138804952	138806349	99	+	0	ID=FBgn0038803.1.mrna1.cds2;Name=FBgn0038803.1;Parent=FBgn0038803.1.mrna1;Target=FBgn0038803.1 262 1659 +
Chr1	stalkie_big_nohaplotig	mRNA	173600201	173601562	.	+	.	ID=FBgn0040697.1.mrna1;Name=FBgn0040697.1;Parent=FBgn0040697.1.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1362;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	173600201	173601562	100	+	.	ID=FBgn0040697.1.mrna1.exon1;Name=FBgn0040697.1;Parent=FBgn0040697.1.mrna1;Target=FBgn0040697.1 1362 1 .
Chr1	stalkie_big_nohaplotig	CDS	173600201	173601562	100	+	0	ID=FBgn0040697.1.mrna1.cds1;Name=FBgn0040697.1;Parent=FBgn0040697.1.mrna1;Target=FBgn0040697.1 1362 1 .
Chr2	stalkie_big_nohaplotig	mRNA	164600965	164628415	.	-	.	ID=ORF971.mrna1;Name=ORF971;Parent=ORF971.path1;Dir=indeterminatecoverage=100.0;identity=98.6;matches=1291;mismatches=17;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	164628356	164628415	100	-	.	ID=ORF971.mrna1.exon1;Name=ORF971;Parent=ORF971.mrna1;Target=ORF971 60 1 .
Chr2	stalkie_big_nohaplotig	exon	164628208	164628232	100	-	.	ID=ORF971.mrna1.exon2;Name=ORF971;Parent=ORF971.mrna1;Target=ORF971 85 61 .
Chr2	stalkie_big_nohaplotig	exon	164619744	164619784	100	-	.	ID=ORF971.mrna1.exon3;Name=ORF971;Parent=ORF971.mrna1;Target=ORF971 126 86 .
Chr2	stalkie_big_nohaplotig	exon	164619087	164619620	98	-	.	ID=ORF971.mrna1.exon4;Name=ORF971;Parent=ORF971.mrna1;Target=ORF971 659 127 .
Chr2	stalkie_big_nohaplotig	exon	164600965	164601613	98	-	.	ID=ORF971.mrna1.exon5;Name=ORF971;Parent=ORF971.mrna1;Target=ORF971 1308 660 .
Chr2	stalkie_big_nohaplotig	CDS	164619388	164619484	96	-	0	ID=ORF971.mrna1.cds1;Name=ORF971;Parent=ORF971.mrna1;Target=ORF971 358 263 .
ChrX	stalkie_big_nohaplotig	mRNA	7311362	7312081	.	-	.	ID=FBgn0038760.mrna1;Name=FBgn0038760;Parent=FBgn0038760.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=719;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	7311362	7312081	99	-	.	ID=FBgn0038760.mrna1.exon1;Name=FBgn0038760;Parent=FBgn0038760.mrna1;Target=FBgn0038760 720 1 .
ChrX	stalkie_big_nohaplotig	CDS	7311362	7312081	99	-	0	ID=FBgn0038760.mrna1.cds1;Name=FBgn0038760;Parent=FBgn0038760.mrna1;Target=FBgn0038760 720 1 .
Chr1	stalkie_big_nohaplotig	mRNA	44738056	44745004	.	-	.	ID=FBgn0036423.2.mrna1;Name=FBgn0036423.2;Parent=FBgn0036423.2.path1;Dir=sensecoverage=100.0;identity=99.4;matches=1297;mismatches=8;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	44744650	44745004	99	-	.	ID=FBgn0036423.2.mrna1.exon1;Name=FBgn0036423.2;Parent=FBgn0036423.2.mrna1;Target=FBgn0036423.2 1 355 +
Chr1	stalkie_big_nohaplotig	exon	44738056	44739005	99	-	.	ID=FBgn0036423.2.mrna1.exon2;Name=FBgn0036423.2;Parent=FBgn0036423.2.mrna1;Target=FBgn0036423.2 356 1305 +
Chr1	stalkie_big_nohaplotig	CDS	44744650	44745004	99	-	0	ID=FBgn0036423.2.mrna1.cds1;Name=FBgn0036423.2;Parent=FBgn0036423.2.mrna1;Target=FBgn0036423.2 1 355 +
Chr1	stalkie_big_nohaplotig	CDS	44738056	44739005	99	-	1	ID=FBgn0036423.2.mrna1.cds2;Name=FBgn0036423.2;Parent=FBgn0036423.2.mrna1;Target=FBgn0036423.2 356 1305 +
Chr1	stalkie_big_nohaplotig	mRNA	157945822	157946390	.	+	.	ID=FBgn0020508.1.mrna1;Name=FBgn0020508.1;Parent=FBgn0020508.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=486;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	157945822	157946066	100	+	.	ID=FBgn0020508.1.mrna1.exon1;Name=FBgn0020508.1;Parent=FBgn0020508.1.mrna1;Target=FBgn0020508.1 1 245 +
Chr1	stalkie_big_nohaplotig	exon	157946150	157946390	100	+	.	ID=FBgn0020508.1.mrna1.exon2;Name=FBgn0020508.1;Parent=FBgn0020508.1.mrna1;Target=FBgn0020508.1 246 486 +
Chr1	stalkie_big_nohaplotig	CDS	157945822	157946066	100	+	0	ID=FBgn0020508.1.mrna1.cds1;Name=FBgn0020508.1;Parent=FBgn0020508.1.mrna1;Target=FBgn0020508.1 1 245 +
Chr1	stalkie_big_nohaplotig	CDS	157946150	157946390	100	+	2	ID=FBgn0020508.1.mrna1.cds2;Name=FBgn0020508.1;Parent=FBgn0020508.1.mrna1;Target=FBgn0020508.1 246 486 +
Chr1	stalkie_big_nohaplotig	mRNA	157991566	157992134	.	+	.	ID=FBgn0020508.1.mrna2;Name=FBgn0020508.1;Parent=FBgn0020508.1.path2;Dir=sensecoverage=100.0;identity=100.0;matches=486;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	157991566	157991810	100	+	.	ID=FBgn0020508.1.mrna2.exon1;Name=FBgn0020508.1;Parent=FBgn0020508.1.mrna2;Target=FBgn0020508.1 1 245 +
Chr1	stalkie_big_nohaplotig	exon	157991894	157992134	100	+	.	ID=FBgn0020508.1.mrna2.exon2;Name=FBgn0020508.1;Parent=FBgn0020508.1.mrna2;Target=FBgn0020508.1 246 486 +
Chr1	stalkie_big_nohaplotig	CDS	157991566	157991810	100	+	0	ID=FBgn0020508.1.mrna2.cds1;Name=FBgn0020508.1;Parent=FBgn0020508.1.mrna2;Target=FBgn0020508.1 1 245 +
Chr1	stalkie_big_nohaplotig	CDS	157991894	157992134	100	+	2	ID=FBgn0020508.1.mrna2.cds2;Name=FBgn0020508.1;Parent=FBgn0020508.1.mrna2;Target=FBgn0020508.1 246 486 +
Chr1	stalkie_big_nohaplotig	mRNA	157995617	157996185	.	-	.	ID=FBgn0020508.1.mrna3;Name=FBgn0020508.1;Parent=FBgn0020508.1.path3;Dir=sensecoverage=100.0;identity=100.0;matches=486;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	157995941	157996185	100	-	.	ID=FBgn0020508.1.mrna3.exon1;Name=FBgn0020508.1;Parent=FBgn0020508.1.mrna3;Target=FBgn0020508.1 1 245 +
Chr1	stalkie_big_nohaplotig	exon	157995617	157995857	100	-	.	ID=FBgn0020508.1.mrna3.exon2;Name=FBgn0020508.1;Parent=FBgn0020508.1.mrna3;Target=FBgn0020508.1 246 486 +
Chr1	stalkie_big_nohaplotig	CDS	157995941	157996185	100	-	0	ID=FBgn0020508.1.mrna3.cds1;Name=FBgn0020508.1;Parent=FBgn0020508.1.mrna3;Target=FBgn0020508.1 1 245 +
Chr1	stalkie_big_nohaplotig	CDS	157995617	157995857	100	-	2	ID=FBgn0020508.1.mrna3.cds2;Name=FBgn0020508.1;Parent=FBgn0020508.1.mrna3;Target=FBgn0020508.1 246 486 +
Chr1	stalkie_big_nohaplotig	mRNA	158029977	158031509	.	-	.	ID=FBgn0003687.1.mrna1;Name=FBgn0003687.1;Parent=FBgn0003687.1.path1;Dir=sensecoverage=96.3;identity=99.4;matches=1225;mismatches=8;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	158031198	158031509	100	-	.	ID=FBgn0003687.1.mrna1.exon1;Name=FBgn0003687.1;Parent=FBgn0003687.1.mrna1;Target=FBgn0003687.1 49 360 +
Chr1	stalkie_big_nohaplotig	exon	158030897	158031133	99	-	.	ID=FBgn0003687.1.mrna1.exon2;Name=FBgn0003687.1;Parent=FBgn0003687.1.mrna1;Target=FBgn0003687.1 361 597 +
Chr1	stalkie_big_nohaplotig	exon	158030697	158030839	98	-	.	ID=FBgn0003687.1.mrna1.exon3;Name=FBgn0003687.1;Parent=FBgn0003687.1.mrna1;Target=FBgn0003687.1 598 740 +
Chr1	stalkie_big_nohaplotig	exon	158030358	158030601	99	-	.	ID=FBgn0003687.1.mrna1.exon4;Name=FBgn0003687.1;Parent=FBgn0003687.1.mrna1;Target=FBgn0003687.1 741 984 +
Chr1	stalkie_big_nohaplotig	exon	158029977	158030273	98	-	.	ID=FBgn0003687.1.mrna1.exon5;Name=FBgn0003687.1;Parent=FBgn0003687.1.mrna1;Target=FBgn0003687.1 985 1281 +
Chr1	stalkie_big_nohaplotig	CDS	158031198	158031509	100	-	0	ID=FBgn0003687.1.mrna1.cds1;Name=FBgn0003687.1;Parent=FBgn0003687.1.mrna1;Target=FBgn0003687.1 49 360 +
Chr1	stalkie_big_nohaplotig	CDS	158030897	158031133	99	-	0	ID=FBgn0003687.1.mrna1.cds2;Name=FBgn0003687.1;Parent=FBgn0003687.1.mrna1;Target=FBgn0003687.1 361 597 +
Chr1	stalkie_big_nohaplotig	CDS	158030697	158030839	98	-	0	ID=FBgn0003687.1.mrna1.cds3;Name=FBgn0003687.1;Parent=FBgn0003687.1.mrna1;Target=FBgn0003687.1 598 740 +
Chr1	stalkie_big_nohaplotig	CDS	158030358	158030601	99	-	2	ID=FBgn0003687.1.mrna1.cds4;Name=FBgn0003687.1;Parent=FBgn0003687.1.mrna1;Target=FBgn0003687.1 741 984 +
Chr1	stalkie_big_nohaplotig	CDS	158029977	158030273	98	-	0	ID=FBgn0003687.1.mrna1.cds5;Name=FBgn0003687.1;Parent=FBgn0003687.1.mrna1;Target=FBgn0003687.1 985 1281 +
Chr1	stalkie_big_nohaplotig	mRNA	158064113	158065528	.	+	.	ID=ORF809.mrna1;Name=ORF809;Parent=ORF809.path1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1409;mismatches=7;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	158064113	158065528	99	+	.	ID=ORF809.mrna1.exon1;Name=ORF809;Parent=ORF809.mrna1;Target=ORF809 1416 1 .
Chr1	stalkie_big_nohaplotig	CDS	158064113	158065528	99	+	0	ID=ORF809.mrna1.cds1;Name=ORF809;Parent=ORF809.mrna1;Target=ORF809 1416 1 .
Chr2	stalkie_big_nohaplotig	mRNA	80803356	80806159	.	-	.	ID=FBgn0037788.1.mrna1;Name=FBgn0037788.1;Parent=FBgn0037788.1.path1;Dir=sensecoverage=91.3;identity=99.2;matches=599;mismatches=5;indels=0;unknowns=1
Chr2	stalkie_big_nohaplotig	exon	80806094	80806159	100	-	.	ID=FBgn0037788.1.mrna1.exon1;Name=FBgn0037788.1;Parent=FBgn0037788.1.mrna1;Target=FBgn0037788.1 59 124 +
Chr2	stalkie_big_nohaplotig	exon	80803992	80804150	100	-	.	ID=FBgn0037788.1.mrna1.exon2;Name=FBgn0037788.1;Parent=FBgn0037788.1.mrna1;Target=FBgn0037788.1 125 283 +
Chr2	stalkie_big_nohaplotig	exon	80803356	80803735	98	-	.	ID=FBgn0037788.1.mrna1.exon3;Name=FBgn0037788.1;Parent=FBgn0037788.1.mrna1;Target=FBgn0037788.1 284 663 +
Chr2	stalkie_big_nohaplotig	CDS	80806094	80806157	100	-	0	ID=FBgn0037788.1.mrna1.cds1;Name=FBgn0037788.1;Parent=FBgn0037788.1.mrna1;Target=FBgn0037788.1 61 124 +
Chr2	stalkie_big_nohaplotig	CDS	80803992	80804150	100	-	1	ID=FBgn0037788.1.mrna1.cds2;Name=FBgn0037788.1;Parent=FBgn0037788.1.mrna1;Target=FBgn0037788.1 125 283 +
Chr2	stalkie_big_nohaplotig	CDS	80803356	80803735	98	-	1	ID=FBgn0037788.1.mrna1.cds3;Name=FBgn0037788.1;Parent=FBgn0037788.1.mrna1;Target=FBgn0037788.1 284 663 +
Chr1	stalkie_big_nohaplotig	mRNA	44725880	44727803	.	+	.	ID=FBgn0087007.mrna1;Name=FBgn0087007;Parent=FBgn0087007.path1;Dir=sensecoverage=100.0;identity=99.3;matches=1349;mismatches=8;indels=2;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	44725880	44726529	99	+	.	ID=FBgn0087007.mrna1.exon1;Name=FBgn0087007;Parent=FBgn0087007.mrna1;Target=FBgn0087007 1 651 +
Chr1	stalkie_big_nohaplotig	exon	44726593	44726721	100	+	.	ID=FBgn0087007.mrna1.exon2;Name=FBgn0087007;Parent=FBgn0087007.mrna1;Target=FBgn0087007 652 780 +
Chr1	stalkie_big_nohaplotig	exon	44726852	44727272	99	+	.	ID=FBgn0087007.mrna1.exon3;Name=FBgn0087007;Parent=FBgn0087007.mrna1;Target=FBgn0087007 781 1201 +
Chr1	stalkie_big_nohaplotig	exon	44727584	44727712	100	+	.	ID=FBgn0087007.mrna1.exon4;Name=FBgn0087007;Parent=FBgn0087007.mrna1;Target=FBgn0087007 1202 1330 +
Chr1	stalkie_big_nohaplotig	exon	44727776	44727803	96	+	.	ID=FBgn0087007.mrna1.exon5;Name=FBgn0087007;Parent=FBgn0087007.mrna1;Target=FBgn0087007 1331 1359 +
Chr1	stalkie_big_nohaplotig	CDS	44725882	44725955	97	+	0	ID=FBgn0087007.mrna1.cds1;Name=FBgn0087007;Parent=FBgn0087007.mrna1;Target=FBgn0087007 3 77 +
Chr2	stalkie_big_nohaplotig	mRNA	94208456	94222299	.	+	.	ID=FBgn0015569.2.mrna1;Name=FBgn0015569.2;Parent=FBgn0015569.2.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1713;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	94208456	94208520	100	+	.	ID=FBgn0015569.2.mrna1.exon1;Name=FBgn0015569.2;Parent=FBgn0015569.2.mrna1;Target=FBgn0015569.2 1 65 +
Chr2	stalkie_big_nohaplotig	exon	94218638	94218950	100	+	.	ID=FBgn0015569.2.mrna1.exon2;Name=FBgn0015569.2;Parent=FBgn0015569.2.mrna1;Target=FBgn0015569.2 66 378 +
Chr2	stalkie_big_nohaplotig	exon	94219009	94219723	100	+	.	ID=FBgn0015569.2.mrna1.exon3;Name=FBgn0015569.2;Parent=FBgn0015569.2.mrna1;Target=FBgn0015569.2 379 1093 +
Chr2	stalkie_big_nohaplotig	exon	94220677	94220852	100	+	.	ID=FBgn0015569.2.mrna1.exon4;Name=FBgn0015569.2;Parent=FBgn0015569.2.mrna1;Target=FBgn0015569.2 1094 1269 +
Chr2	stalkie_big_nohaplotig	exon	94221856	94222299	100	+	.	ID=FBgn0015569.2.mrna1.exon5;Name=FBgn0015569.2;Parent=FBgn0015569.2.mrna1;Target=FBgn0015569.2 1270 1713 +
Chr2	stalkie_big_nohaplotig	CDS	94208456	94208520	100	+	0	ID=FBgn0015569.2.mrna1.cds1;Name=FBgn0015569.2;Parent=FBgn0015569.2.mrna1;Target=FBgn0015569.2 1 65 +
Chr2	stalkie_big_nohaplotig	CDS	94218638	94218950	100	+	2	ID=FBgn0015569.2.mrna1.cds2;Name=FBgn0015569.2;Parent=FBgn0015569.2.mrna1;Target=FBgn0015569.2 66 378 +
Chr2	stalkie_big_nohaplotig	CDS	94219009	94219723	100	+	0	ID=FBgn0015569.2.mrna1.cds3;Name=FBgn0015569.2;Parent=FBgn0015569.2.mrna1;Target=FBgn0015569.2 379 1093 +
Chr2	stalkie_big_nohaplotig	CDS	94220677	94220852	100	+	1	ID=FBgn0015569.2.mrna1.cds4;Name=FBgn0015569.2;Parent=FBgn0015569.2.mrna1;Target=FBgn0015569.2 1094 1269 +
Chr2	stalkie_big_nohaplotig	CDS	94221856	94222299	100	+	0	ID=FBgn0015569.2.mrna1.cds5;Name=FBgn0015569.2;Parent=FBgn0015569.2.mrna1;Target=FBgn0015569.2 1270 1713 +
Chr2	stalkie_big_nohaplotig	mRNA	8616407	8623380	.	-	.	ID=FBgn0034641.1.mrna1;Name=FBgn0034641.1;Parent=FBgn0034641.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=4529;mismatches=13;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	8622992	8623380	100	-	.	ID=FBgn0034641.1.mrna1.exon1;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 1 389 +
Chr2	stalkie_big_nohaplotig	exon	8622784	8622934	100	-	.	ID=FBgn0034641.1.mrna1.exon2;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 390 540 +
Chr2	stalkie_big_nohaplotig	exon	8621857	8622714	99	-	.	ID=FBgn0034641.1.mrna1.exon3;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 541 1398 +
Chr2	stalkie_big_nohaplotig	exon	8621511	8621783	100	-	.	ID=FBgn0034641.1.mrna1.exon4;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 1399 1671 +
Chr2	stalkie_big_nohaplotig	exon	8621082	8621455	99	-	.	ID=FBgn0034641.1.mrna1.exon5;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 1672 2045 +
Chr2	stalkie_big_nohaplotig	exon	8620787	8621006	98	-	.	ID=FBgn0034641.1.mrna1.exon6;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 2046 2265 +
Chr2	stalkie_big_nohaplotig	exon	8619156	8620658	99	-	.	ID=FBgn0034641.1.mrna1.exon7;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 2266 3768 +
Chr2	stalkie_big_nohaplotig	exon	8618972	8619092	100	-	.	ID=FBgn0034641.1.mrna1.exon8;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 3769 3889 +
Chr2	stalkie_big_nohaplotig	exon	8618823	8618920	100	-	.	ID=FBgn0034641.1.mrna1.exon9;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 3890 3987 +
Chr2	stalkie_big_nohaplotig	exon	8618397	8618762	99	-	.	ID=FBgn0034641.1.mrna1.exon10;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 3988 4353 +
Chr2	stalkie_big_nohaplotig	exon	8618026	8618086	98	-	.	ID=FBgn0034641.1.mrna1.exon11;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 4354 4414 +
Chr2	stalkie_big_nohaplotig	exon	8616407	8616534	100	-	.	ID=FBgn0034641.1.mrna1.exon12;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 4415 4542 +
Chr2	stalkie_big_nohaplotig	CDS	8622992	8623380	100	-	0	ID=FBgn0034641.1.mrna1.cds1;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 1 389 +
Chr2	stalkie_big_nohaplotig	CDS	8622784	8622934	100	-	2	ID=FBgn0034641.1.mrna1.cds2;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 390 540 +
Chr2	stalkie_big_nohaplotig	CDS	8621857	8622714	99	-	0	ID=FBgn0034641.1.mrna1.cds3;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 541 1398 +
Chr2	stalkie_big_nohaplotig	CDS	8621511	8621783	100	-	0	ID=FBgn0034641.1.mrna1.cds4;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 1399 1671 +
Chr2	stalkie_big_nohaplotig	CDS	8621082	8621455	99	-	0	ID=FBgn0034641.1.mrna1.cds5;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 1672 2045 +
Chr2	stalkie_big_nohaplotig	CDS	8620787	8621006	98	-	2	ID=FBgn0034641.1.mrna1.cds6;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 2046 2265 +
Chr2	stalkie_big_nohaplotig	CDS	8619156	8620658	99	-	0	ID=FBgn0034641.1.mrna1.cds7;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 2266 3768 +
Chr2	stalkie_big_nohaplotig	CDS	8618972	8619092	100	-	0	ID=FBgn0034641.1.mrna1.cds8;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 3769 3889 +
Chr2	stalkie_big_nohaplotig	CDS	8618823	8618920	100	-	1	ID=FBgn0034641.1.mrna1.cds9;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 3890 3987 +
Chr2	stalkie_big_nohaplotig	CDS	8618397	8618762	99	-	0	ID=FBgn0034641.1.mrna1.cds10;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 3988 4353 +
Chr2	stalkie_big_nohaplotig	CDS	8618026	8618086	98	-	0	ID=FBgn0034641.1.mrna1.cds11;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 4354 4414 +
Chr2	stalkie_big_nohaplotig	CDS	8616407	8616534	100	-	1	ID=FBgn0034641.1.mrna1.cds12;Name=FBgn0034641.1;Parent=FBgn0034641.1.mrna1;Target=FBgn0034641.1 4415 4542 +
Chr2	stalkie_big_nohaplotig	mRNA	28662994	28667170	.	+	.	ID=FBgn0000581.1.mrna1;Name=FBgn0000581.1;Parent=FBgn0000581.1.path1;Dir=sensecoverage=67.4;identity=99.5;matches=3634;mismatches=11;indels=6;unknowns=2
Chr2	stalkie_big_nohaplotig	exon	28662994	28663133	99	+	.	ID=FBgn0000581.1.mrna1.exon1;Name=FBgn0000581.1;Parent=FBgn0000581.1.mrna1;Target=FBgn0000581.1 165 304 +
Chr2	stalkie_big_nohaplotig	exon	28663198	28663436	100	+	.	ID=FBgn0000581.1.mrna1.exon2;Name=FBgn0000581.1;Parent=FBgn0000581.1.mrna1;Target=FBgn0000581.1 305 543 +
Chr2	stalkie_big_nohaplotig	exon	28663510	28663664	99	+	.	ID=FBgn0000581.1.mrna1.exon3;Name=FBgn0000581.1;Parent=FBgn0000581.1.mrna1;Target=FBgn0000581.1 544 698 +
Chr2	stalkie_big_nohaplotig	exon	28663734	28663898	100	+	.	ID=FBgn0000581.1.mrna1.exon4;Name=FBgn0000581.1;Parent=FBgn0000581.1.mrna1;Target=FBgn0000581.1 699 863 +
Chr2	stalkie_big_nohaplotig	exon	28663986	28664182	100	+	.	ID=FBgn0000581.1.mrna1.exon5;Name=FBgn0000581.1;Parent=FBgn0000581.1.mrna1;Target=FBgn0000581.1 864 1060 +
Chr2	stalkie_big_nohaplotig	exon	28664270	28664625	100	+	.	ID=FBgn0000581.1.mrna1.exon6;Name=FBgn0000581.1;Parent=FBgn0000581.1.mrna1;Target=FBgn0000581.1 1061 1416 +
Chr2	stalkie_big_nohaplotig	exon	28664702	28664802	99	+	.	ID=FBgn0000581.1.mrna1.exon7;Name=FBgn0000581.1;Parent=FBgn0000581.1.mrna1;Target=FBgn0000581.1 1417 1517 +
Chr2	stalkie_big_nohaplotig	exon	28664871	28667170	99	+	.	ID=FBgn0000581.1.mrna1.exon8;Name=FBgn0000581.1;Parent=FBgn0000581.1.mrna1;Target=FBgn0000581.1 1518 3811 +
Chr2	stalkie_big_nohaplotig	CDS	28663106	28663133	100	+	0	ID=FBgn0000581.1.mrna1.cds1;Name=FBgn0000581.1;Parent=FBgn0000581.1.mrna1;Target=FBgn0000581.1 277 304 +
Chr2	stalkie_big_nohaplotig	CDS	28663198	28663436	100	+	1	ID=FBgn0000581.1.mrna1.cds2;Name=FBgn0000581.1;Parent=FBgn0000581.1.mrna1;Target=FBgn0000581.1 305 543 +
Chr2	stalkie_big_nohaplotig	CDS	28663510	28663664	99	+	0	ID=FBgn0000581.1.mrna1.cds3;Name=FBgn0000581.1;Parent=FBgn0000581.1.mrna1;Target=FBgn0000581.1 544 698 +
Chr2	stalkie_big_nohaplotig	CDS	28663734	28663898	100	+	2	ID=FBgn0000581.1.mrna1.cds4;Name=FBgn0000581.1;Parent=FBgn0000581.1.mrna1;Target=FBgn0000581.1 699 863 +
Chr2	stalkie_big_nohaplotig	CDS	28663986	28664182	100	+	2	ID=FBgn0000581.1.mrna1.cds5;Name=FBgn0000581.1;Parent=FBgn0000581.1.mrna1;Target=FBgn0000581.1 864 1060 +
Chr2	stalkie_big_nohaplotig	CDS	28664270	28664625	100	+	1	ID=FBgn0000581.1.mrna1.cds6;Name=FBgn0000581.1;Parent=FBgn0000581.1.mrna1;Target=FBgn0000581.1 1061 1416 +
Chr2	stalkie_big_nohaplotig	CDS	28664702	28664802	99	+	0	ID=FBgn0000581.1.mrna1.cds7;Name=FBgn0000581.1;Parent=FBgn0000581.1.mrna1;Target=FBgn0000581.1 1417 1517 +
Chr2	stalkie_big_nohaplotig	CDS	28664871	28667170	99	+	2	ID=FBgn0000581.1.mrna1.cds8;Name=FBgn0000581.1;Parent=FBgn0000581.1.mrna1;Target=FBgn0000581.1 1518 3811 +
Chr1	stalkie_big_nohaplotig	mRNA	38677330	38760742	.	-	.	ID=FBgn0015904.3.mrna1;Name=FBgn0015904.3;Parent=FBgn0015904.3.path1;Dir=sensecoverage=32.3;identity=92.7;matches=536;mismatches=14;indels=28;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	38760677	38760742	100	-	.	ID=FBgn0015904.3.mrna1.exon1;Name=FBgn0015904.3;Parent=FBgn0015904.3.mrna1;Target=FBgn0015904.3 1 66 +
Chr1	stalkie_big_nohaplotig	exon	38677330	38677833	91	-	.	ID=FBgn0015904.3.mrna1.exon2;Name=FBgn0015904.3;Parent=FBgn0015904.3.mrna1;Target=FBgn0015904.3 67 558 +
Chr1	stalkie_big_nohaplotig	CDS	38677330	38677515	99	-	0	ID=FBgn0015904.3.mrna1.cds1;Name=FBgn0015904.3;Parent=FBgn0015904.3.mrna1;Target=FBgn0015904.3 373 558 +
Chr1	stalkie_big_nohaplotig	mRNA	38545861	38553743	.	+	.	ID=FBgn0015904.3.mrna2;Name=FBgn0015904.3;Parent=FBgn0015904.3.path2;Dir=sensecoverage=67.7;identity=99.8;matches=1168;mismatches=1;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	38545861	38545976	100	+	.	ID=FBgn0015904.3.mrna2.exon1;Name=FBgn0015904.3;Parent=FBgn0015904.3.mrna2;Target=FBgn0015904.3 559 674 +
Chr1	stalkie_big_nohaplotig	exon	38552538	38552905	100	+	.	ID=FBgn0015904.3.mrna2.exon2;Name=FBgn0015904.3;Parent=FBgn0015904.3.mrna2;Target=FBgn0015904.3 675 1042 +
Chr1	stalkie_big_nohaplotig	exon	38553059	38553743	99	+	.	ID=FBgn0015904.3.mrna2.exon3;Name=FBgn0015904.3;Parent=FBgn0015904.3.mrna2;Target=FBgn0015904.3 1043 1728 +
Chr1	stalkie_big_nohaplotig	CDS	38545861	38545976	100	+	0	ID=FBgn0015904.3.mrna2.cds1;Name=FBgn0015904.3;Parent=FBgn0015904.3.mrna2;Target=FBgn0015904.3 559 674 +
Chr1	stalkie_big_nohaplotig	CDS	38552538	38552905	100	+	2	ID=FBgn0015904.3.mrna2.cds2;Name=FBgn0015904.3;Parent=FBgn0015904.3.mrna2;Target=FBgn0015904.3 675 1042 +
Chr1	stalkie_big_nohaplotig	CDS	38553059	38553743	99	+	1	ID=FBgn0015904.3.mrna2.cds3;Name=FBgn0015904.3;Parent=FBgn0015904.3.mrna2;Target=FBgn0015904.3 1043 1728 +
ChrX	stalkie_big_nohaplotig	mRNA	89797746	89798427	.	+	.	ID=FBgn0027559.mrna1;Name=FBgn0027559;Parent=FBgn0027559.path1;Dir=indeterminatecoverage=99.7;identity=100.0;matches=682;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	89797746	89798427	100	+	.	ID=FBgn0027559.mrna1.exon1;Name=FBgn0027559;Parent=FBgn0027559.mrna1;Target=FBgn0027559 682 1 .
ChrX	stalkie_big_nohaplotig	CDS	89797746	89798426	100	+	0	ID=FBgn0027559.mrna1.cds1;Name=FBgn0027559;Parent=FBgn0027559.mrna1;Target=FBgn0027559 681 1 .
Chr2	stalkie_big_nohaplotig	mRNA	77876167	77879660	.	+	.	ID=FBgn0037252.1.mrna1;Name=FBgn0037252.1;Parent=FBgn0037252.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=2877;mismatches=0;indels=3;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	77876167	77878472	99	+	.	ID=FBgn0037252.1.mrna1.exon1;Name=FBgn0037252.1;Parent=FBgn0037252.1.mrna1;Target=FBgn0037252.1 1 2309 +
Chr2	stalkie_big_nohaplotig	exon	77878528	77878681	100	+	.	ID=FBgn0037252.1.mrna1.exon2;Name=FBgn0037252.1;Parent=FBgn0037252.1.mrna1;Target=FBgn0037252.1 2310 2463 +
Chr2	stalkie_big_nohaplotig	exon	77878774	77878898	100	+	.	ID=FBgn0037252.1.mrna1.exon3;Name=FBgn0037252.1;Parent=FBgn0037252.1.mrna1;Target=FBgn0037252.1 2464 2588 +
Chr2	stalkie_big_nohaplotig	exon	77879285	77879387	100	+	.	ID=FBgn0037252.1.mrna1.exon4;Name=FBgn0037252.1;Parent=FBgn0037252.1.mrna1;Target=FBgn0037252.1 2589 2691 +
Chr2	stalkie_big_nohaplotig	exon	77879472	77879660	100	+	.	ID=FBgn0037252.1.mrna1.exon5;Name=FBgn0037252.1;Parent=FBgn0037252.1.mrna1;Target=FBgn0037252.1 2692 2880 +
Chr2	stalkie_big_nohaplotig	CDS	77876167	77878472	99	+	0	ID=FBgn0037252.1.mrna1.cds1;Name=FBgn0037252.1;Parent=FBgn0037252.1.mrna1;Target=FBgn0037252.1 1 2309 +
Chr2	stalkie_big_nohaplotig	CDS	77878528	77878681	100	+	2	ID=FBgn0037252.1.mrna1.cds2;Name=FBgn0037252.1;Parent=FBgn0037252.1.mrna1;Target=FBgn0037252.1 2310 2463 +
Chr2	stalkie_big_nohaplotig	CDS	77878774	77878898	100	+	0	ID=FBgn0037252.1.mrna1.cds3;Name=FBgn0037252.1;Parent=FBgn0037252.1.mrna1;Target=FBgn0037252.1 2464 2588 +
Chr2	stalkie_big_nohaplotig	CDS	77879285	77879387	100	+	2	ID=FBgn0037252.1.mrna1.cds4;Name=FBgn0037252.1;Parent=FBgn0037252.1.mrna1;Target=FBgn0037252.1 2589 2691 +
Chr2	stalkie_big_nohaplotig	CDS	77879472	77879660	100	+	0	ID=FBgn0037252.1.mrna1.cds5;Name=FBgn0037252.1;Parent=FBgn0037252.1.mrna1;Target=FBgn0037252.1 2692 2880 +
Chr1	stalkie_big_nohaplotig	mRNA	15614177	15618247	.	-	.	ID=FBgn0035338.1.mrna1;Name=FBgn0035338.1;Parent=FBgn0035338.1.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=4071;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	15614177	15618247	100	-	.	ID=FBgn0035338.1.mrna1.exon1;Name=FBgn0035338.1;Parent=FBgn0035338.1.mrna1;Target=FBgn0035338.1 4071 1 .
Chr1	stalkie_big_nohaplotig	CDS	15614177	15618247	100	-	0	ID=FBgn0035338.1.mrna1.cds1;Name=FBgn0035338.1;Parent=FBgn0035338.1.mrna1;Target=FBgn0035338.1 4071 1 .
Chr1	stalkie_big_nohaplotig	mRNA	23271771	23276875	.	+	.	ID=FBgn0035978.1.mrna1;Name=FBgn0035978.1;Parent=FBgn0035978.1.path1;Dir=sensecoverage=95.4;identity=99.7;matches=1498;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	23271771	23271957	99	+	.	ID=FBgn0035978.1.mrna1.exon1;Name=FBgn0035978.1;Parent=FBgn0035978.1.mrna1;Target=FBgn0035978.1 73 259 +
Chr1	stalkie_big_nohaplotig	exon	23272035	23272126	100	+	.	ID=FBgn0035978.1.mrna1.exon2;Name=FBgn0035978.1;Parent=FBgn0035978.1.mrna1;Target=FBgn0035978.1 260 351 +
Chr1	stalkie_big_nohaplotig	exon	23274305	23274445	98	+	.	ID=FBgn0035978.1.mrna1.exon3;Name=FBgn0035978.1;Parent=FBgn0035978.1.mrna1;Target=FBgn0035978.1 352 492 +
Chr1	stalkie_big_nohaplotig	exon	23274512	23274717	100	+	.	ID=FBgn0035978.1.mrna1.exon4;Name=FBgn0035978.1;Parent=FBgn0035978.1.mrna1;Target=FBgn0035978.1 493 698 +
Chr1	stalkie_big_nohaplotig	exon	23274787	23275009	99	+	.	ID=FBgn0035978.1.mrna1.exon5;Name=FBgn0035978.1;Parent=FBgn0035978.1.mrna1;Target=FBgn0035978.1 699 921 +
Chr1	stalkie_big_nohaplotig	exon	23275080	23275218	100	+	.	ID=FBgn0035978.1.mrna1.exon6;Name=FBgn0035978.1;Parent=FBgn0035978.1.mrna1;Target=FBgn0035978.1 922 1060 +
Chr1	stalkie_big_nohaplotig	exon	23276294	23276703	100	+	.	ID=FBgn0035978.1.mrna1.exon7;Name=FBgn0035978.1;Parent=FBgn0035978.1.mrna1;Target=FBgn0035978.1 1061 1470 +
Chr1	stalkie_big_nohaplotig	exon	23276771	23276875	100	+	.	ID=FBgn0035978.1.mrna1.exon8;Name=FBgn0035978.1;Parent=FBgn0035978.1.mrna1;Target=FBgn0035978.1 1471 1575 +
Chr1	stalkie_big_nohaplotig	CDS	23271771	23271957	99	+	0	ID=FBgn0035978.1.mrna1.cds1;Name=FBgn0035978.1;Parent=FBgn0035978.1.mrna1;Target=FBgn0035978.1 73 259 +
Chr1	stalkie_big_nohaplotig	CDS	23272035	23272126	100	+	1	ID=FBgn0035978.1.mrna1.cds2;Name=FBgn0035978.1;Parent=FBgn0035978.1.mrna1;Target=FBgn0035978.1 260 351 +
Chr1	stalkie_big_nohaplotig	CDS	23274305	23274445	98	+	0	ID=FBgn0035978.1.mrna1.cds3;Name=FBgn0035978.1;Parent=FBgn0035978.1.mrna1;Target=FBgn0035978.1 352 492 +
Chr1	stalkie_big_nohaplotig	CDS	23274512	23274717	100	+	0	ID=FBgn0035978.1.mrna1.cds4;Name=FBgn0035978.1;Parent=FBgn0035978.1.mrna1;Target=FBgn0035978.1 493 698 +
Chr1	stalkie_big_nohaplotig	CDS	23274787	23275009	99	+	2	ID=FBgn0035978.1.mrna1.cds5;Name=FBgn0035978.1;Parent=FBgn0035978.1.mrna1;Target=FBgn0035978.1 699 921 +
Chr1	stalkie_big_nohaplotig	CDS	23275080	23275218	100	+	0	ID=FBgn0035978.1.mrna1.cds6;Name=FBgn0035978.1;Parent=FBgn0035978.1.mrna1;Target=FBgn0035978.1 922 1060 +
Chr1	stalkie_big_nohaplotig	CDS	23276294	23276703	100	+	1	ID=FBgn0035978.1.mrna1.cds7;Name=FBgn0035978.1;Parent=FBgn0035978.1.mrna1;Target=FBgn0035978.1 1061 1470 +
Chr1	stalkie_big_nohaplotig	CDS	23276771	23276875	100	+	0	ID=FBgn0035978.1.mrna1.cds8;Name=FBgn0035978.1;Parent=FBgn0035978.1.mrna1;Target=FBgn0035978.1 1471 1575 +
Chr2	stalkie_big_nohaplotig	mRNA	75357274	75369269	.	-	.	ID=FBgn0003862.1.mrna1;Name=FBgn0003862.1;Parent=FBgn0003862.1.path1;Dir=sensecoverage=99.8;identity=100.0;matches=9205;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	75368451	75369269	100	-	.	ID=FBgn0003862.1.mrna1.exon1;Name=FBgn0003862.1;Parent=FBgn0003862.1.mrna1;Target=FBgn0003862.1 1 819 +
Chr2	stalkie_big_nohaplotig	exon	75365238	75365901	100	-	.	ID=FBgn0003862.1.mrna1.exon2;Name=FBgn0003862.1;Parent=FBgn0003862.1.mrna1;Target=FBgn0003862.1 820 1483 +
Chr2	stalkie_big_nohaplotig	exon	75364932	75365183	100	-	.	ID=FBgn0003862.1.mrna1.exon3;Name=FBgn0003862.1;Parent=FBgn0003862.1.mrna1;Target=FBgn0003862.1 1484 1735 +
Chr2	stalkie_big_nohaplotig	exon	75364568	75364867	100	-	.	ID=FBgn0003862.1.mrna1.exon4;Name=FBgn0003862.1;Parent=FBgn0003862.1.mrna1;Target=FBgn0003862.1 1736 2035 +
Chr2	stalkie_big_nohaplotig	exon	75364316	75364501	100	-	.	ID=FBgn0003862.1.mrna1.exon5;Name=FBgn0003862.1;Parent=FBgn0003862.1.mrna1;Target=FBgn0003862.1 2036 2221 +
Chr2	stalkie_big_nohaplotig	exon	75357274	75364259	99	-	.	ID=FBgn0003862.1.mrna1.exon6;Name=FBgn0003862.1;Parent=FBgn0003862.1.mrna1;Target=FBgn0003862.1 2222 9207 +
Chr2	stalkie_big_nohaplotig	CDS	75368451	75369269	100	-	0	ID=FBgn0003862.1.mrna1.cds1;Name=FBgn0003862.1;Parent=FBgn0003862.1.mrna1;Target=FBgn0003862.1 1 819 +
Chr2	stalkie_big_nohaplotig	CDS	75365238	75365901	100	-	0	ID=FBgn0003862.1.mrna1.cds2;Name=FBgn0003862.1;Parent=FBgn0003862.1.mrna1;Target=FBgn0003862.1 820 1483 +
Chr2	stalkie_big_nohaplotig	CDS	75364932	75365183	100	-	1	ID=FBgn0003862.1.mrna1.cds3;Name=FBgn0003862.1;Parent=FBgn0003862.1.mrna1;Target=FBgn0003862.1 1484 1735 +
Chr2	stalkie_big_nohaplotig	CDS	75364568	75364867	100	-	1	ID=FBgn0003862.1.mrna1.cds4;Name=FBgn0003862.1;Parent=FBgn0003862.1.mrna1;Target=FBgn0003862.1 1736 2035 +
Chr2	stalkie_big_nohaplotig	CDS	75364316	75364501	100	-	1	ID=FBgn0003862.1.mrna1.cds5;Name=FBgn0003862.1;Parent=FBgn0003862.1.mrna1;Target=FBgn0003862.1 2036 2221 +
Chr2	stalkie_big_nohaplotig	CDS	75357274	75364259	99	-	1	ID=FBgn0003862.1.mrna1.cds6;Name=FBgn0003862.1;Parent=FBgn0003862.1.mrna1;Target=FBgn0003862.1 2222 9207 +
Chr1	stalkie_big_nohaplotig	mRNA	122533461	122546665	.	-	.	ID=FBgn0017418.1.mrna1;Name=FBgn0017418.1;Parent=FBgn0017418.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1524;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	122546438	122546665	100	-	.	ID=FBgn0017418.1.mrna1.exon1;Name=FBgn0017418.1;Parent=FBgn0017418.1.mrna1;Target=FBgn0017418.1 1 228 +
Chr1	stalkie_big_nohaplotig	exon	122538715	122538870	100	-	.	ID=FBgn0017418.1.mrna1.exon2;Name=FBgn0017418.1;Parent=FBgn0017418.1.mrna1;Target=FBgn0017418.1 229 384 +
Chr1	stalkie_big_nohaplotig	exon	122538592	122538651	100	-	.	ID=FBgn0017418.1.mrna1.exon3;Name=FBgn0017418.1;Parent=FBgn0017418.1.mrna1;Target=FBgn0017418.1 385 444 +
Chr1	stalkie_big_nohaplotig	exon	122535953	122536602	100	-	.	ID=FBgn0017418.1.mrna1.exon4;Name=FBgn0017418.1;Parent=FBgn0017418.1.mrna1;Target=FBgn0017418.1 445 1094 +
Chr1	stalkie_big_nohaplotig	exon	122535766	122535889	100	-	.	ID=FBgn0017418.1.mrna1.exon5;Name=FBgn0017418.1;Parent=FBgn0017418.1.mrna1;Target=FBgn0017418.1 1095 1218 +
Chr1	stalkie_big_nohaplotig	exon	122535477	122535703	100	-	.	ID=FBgn0017418.1.mrna1.exon6;Name=FBgn0017418.1;Parent=FBgn0017418.1.mrna1;Target=FBgn0017418.1 1219 1445 +
Chr1	stalkie_big_nohaplotig	exon	122533461	122533539	100	-	.	ID=FBgn0017418.1.mrna1.exon7;Name=FBgn0017418.1;Parent=FBgn0017418.1.mrna1;Target=FBgn0017418.1 1446 1524 +
Chr1	stalkie_big_nohaplotig	CDS	122546438	122546665	100	-	0	ID=FBgn0017418.1.mrna1.cds1;Name=FBgn0017418.1;Parent=FBgn0017418.1.mrna1;Target=FBgn0017418.1 1 228 +
Chr1	stalkie_big_nohaplotig	CDS	122538715	122538870	100	-	0	ID=FBgn0017418.1.mrna1.cds2;Name=FBgn0017418.1;Parent=FBgn0017418.1.mrna1;Target=FBgn0017418.1 229 384 +
Chr1	stalkie_big_nohaplotig	CDS	122538592	122538651	100	-	0	ID=FBgn0017418.1.mrna1.cds3;Name=FBgn0017418.1;Parent=FBgn0017418.1.mrna1;Target=FBgn0017418.1 385 444 +
Chr1	stalkie_big_nohaplotig	CDS	122535953	122536602	100	-	0	ID=FBgn0017418.1.mrna1.cds4;Name=FBgn0017418.1;Parent=FBgn0017418.1.mrna1;Target=FBgn0017418.1 445 1094 +
Chr1	stalkie_big_nohaplotig	CDS	122535766	122535889	100	-	2	ID=FBgn0017418.1.mrna1.cds5;Name=FBgn0017418.1;Parent=FBgn0017418.1.mrna1;Target=FBgn0017418.1 1095 1218 +
Chr1	stalkie_big_nohaplotig	CDS	122535477	122535703	100	-	0	ID=FBgn0017418.1.mrna1.cds6;Name=FBgn0017418.1;Parent=FBgn0017418.1.mrna1;Target=FBgn0017418.1 1219 1445 +
Chr1	stalkie_big_nohaplotig	CDS	122533461	122533539	100	-	2	ID=FBgn0017418.1.mrna1.cds7;Name=FBgn0017418.1;Parent=FBgn0017418.1.mrna1;Target=FBgn0017418.1 1446 1524 +
Chr2	stalkie_big_nohaplotig	mRNA	94056553	94061331	.	+	.	ID=FBgn0261393.3.mrna1;Name=FBgn0261393.3;Parent=FBgn0261393.3.path1;Dir=sensecoverage=99.9;identity=98.5;matches=1620;mismatches=25;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	94056553	94056596	100	+	.	ID=FBgn0261393.3.mrna1.exon1;Name=FBgn0261393.3;Parent=FBgn0261393.3.mrna1;Target=FBgn0261393.3 1 44 +
Chr2	stalkie_big_nohaplotig	exon	94056692	94056959	100	+	.	ID=FBgn0261393.3.mrna1.exon2;Name=FBgn0261393.3;Parent=FBgn0261393.3.mrna1;Target=FBgn0261393.3 45 312 +
Chr2	stalkie_big_nohaplotig	exon	94057352	94057502	100	+	.	ID=FBgn0261393.3.mrna1.exon3;Name=FBgn0261393.3;Parent=FBgn0261393.3.mrna1;Target=FBgn0261393.3 313 463 +
Chr2	stalkie_big_nohaplotig	exon	94059585	94060318	100	+	.	ID=FBgn0261393.3.mrna1.exon4;Name=FBgn0261393.3;Parent=FBgn0261393.3.mrna1;Target=FBgn0261393.3 464 1197 +
Chr2	stalkie_big_nohaplotig	exon	94060884	94061331	94	+	.	ID=FBgn0261393.3.mrna1.exon5;Name=FBgn0261393.3;Parent=FBgn0261393.3.mrna1;Target=FBgn0261393.3 1198 1645 +
Chr2	stalkie_big_nohaplotig	CDS	94056553	94056596	100	+	0	ID=FBgn0261393.3.mrna1.cds1;Name=FBgn0261393.3;Parent=FBgn0261393.3.mrna1;Target=FBgn0261393.3 1 44 +
Chr2	stalkie_big_nohaplotig	CDS	94056692	94056959	100	+	2	ID=FBgn0261393.3.mrna1.cds2;Name=FBgn0261393.3;Parent=FBgn0261393.3.mrna1;Target=FBgn0261393.3 45 312 +
Chr2	stalkie_big_nohaplotig	CDS	94057352	94057502	100	+	0	ID=FBgn0261393.3.mrna1.cds3;Name=FBgn0261393.3;Parent=FBgn0261393.3.mrna1;Target=FBgn0261393.3 313 463 +
Chr2	stalkie_big_nohaplotig	CDS	94059585	94060318	100	+	1	ID=FBgn0261393.3.mrna1.cds4;Name=FBgn0261393.3;Parent=FBgn0261393.3.mrna1;Target=FBgn0261393.3 464 1197 +
Chr2	stalkie_big_nohaplotig	CDS	94060884	94061330	94	+	0	ID=FBgn0261393.3.mrna1.cds5;Name=FBgn0261393.3;Parent=FBgn0261393.3.mrna1;Target=FBgn0261393.3 1198 1644 +
Chr2	stalkie_big_nohaplotig	mRNA	164266899	164275133	.	-	.	ID=FBgn0037549.2.mrna1;Name=FBgn0037549.2;Parent=FBgn0037549.2.path1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=2019;mismatches=9;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	164274749	164275133	100	-	.	ID=FBgn0037549.2.mrna1.exon1;Name=FBgn0037549.2;Parent=FBgn0037549.2.mrna1;Target=FBgn0037549.2 385 1 .
Chr2	stalkie_big_nohaplotig	exon	164274465	164274595	100	-	.	ID=FBgn0037549.2.mrna1.exon2;Name=FBgn0037549.2;Parent=FBgn0037549.2.mrna1;Target=FBgn0037549.2 516 386 .
Chr2	stalkie_big_nohaplotig	exon	164274272	164274379	100	-	.	ID=FBgn0037549.2.mrna1.exon3;Name=FBgn0037549.2;Parent=FBgn0037549.2.mrna1;Target=FBgn0037549.2 624 517 .
Chr2	stalkie_big_nohaplotig	exon	164273898	164274173	100	-	.	ID=FBgn0037549.2.mrna1.exon4;Name=FBgn0037549.2;Parent=FBgn0037549.2.mrna1;Target=FBgn0037549.2 900 625 .
Chr2	stalkie_big_nohaplotig	exon	164268066	164268295	96	-	.	ID=FBgn0037549.2.mrna1.exon5;Name=FBgn0037549.2;Parent=FBgn0037549.2.mrna1;Target=FBgn0037549.2 1130 901 .
Chr2	stalkie_big_nohaplotig	exon	164267606	164267996	100	-	.	ID=FBgn0037549.2.mrna1.exon6;Name=FBgn0037549.2;Parent=FBgn0037549.2.mrna1;Target=FBgn0037549.2 1521 1131 .
Chr2	stalkie_big_nohaplotig	exon	164267400	164267540	100	-	.	ID=FBgn0037549.2.mrna1.exon7;Name=FBgn0037549.2;Parent=FBgn0037549.2.mrna1;Target=FBgn0037549.2 1662 1522 .
Chr2	stalkie_big_nohaplotig	exon	164267221	164267321	100	-	.	ID=FBgn0037549.2.mrna1.exon8;Name=FBgn0037549.2;Parent=FBgn0037549.2.mrna1;Target=FBgn0037549.2 1763 1663 .
Chr2	stalkie_big_nohaplotig	exon	164266899	164267163	99	-	.	ID=FBgn0037549.2.mrna1.exon9;Name=FBgn0037549.2;Parent=FBgn0037549.2.mrna1;Target=FBgn0037549.2 2028 1764 .
Chr2	stalkie_big_nohaplotig	CDS	164274749	164275133	100	-	0	ID=FBgn0037549.2.mrna1.cds1;Name=FBgn0037549.2;Parent=FBgn0037549.2.mrna1;Target=FBgn0037549.2 385 1 .
Chr2	stalkie_big_nohaplotig	CDS	164274465	164274595	100	-	1	ID=FBgn0037549.2.mrna1.cds2;Name=FBgn0037549.2;Parent=FBgn0037549.2.mrna1;Target=FBgn0037549.2 516 386 .
Chr2	stalkie_big_nohaplotig	CDS	164274272	164274379	100	-	0	ID=FBgn0037549.2.mrna1.cds3;Name=FBgn0037549.2;Parent=FBgn0037549.2.mrna1;Target=FBgn0037549.2 624 517 .
Chr2	stalkie_big_nohaplotig	CDS	164273898	164274173	100	-	0	ID=FBgn0037549.2.mrna1.cds4;Name=FBgn0037549.2;Parent=FBgn0037549.2.mrna1;Target=FBgn0037549.2 900 625 .
Chr2	stalkie_big_nohaplotig	CDS	164268066	164268295	96	-	0	ID=FBgn0037549.2.mrna1.cds5;Name=FBgn0037549.2;Parent=FBgn0037549.2.mrna1;Target=FBgn0037549.2 1130 901 .
Chr2	stalkie_big_nohaplotig	CDS	164267606	164267996	100	-	2	ID=FBgn0037549.2.mrna1.cds6;Name=FBgn0037549.2;Parent=FBgn0037549.2.mrna1;Target=FBgn0037549.2 1521 1131 .
Chr2	stalkie_big_nohaplotig	CDS	164267400	164267540	100	-	0	ID=FBgn0037549.2.mrna1.cds7;Name=FBgn0037549.2;Parent=FBgn0037549.2.mrna1;Target=FBgn0037549.2 1662 1522 .
Chr2	stalkie_big_nohaplotig	CDS	164267221	164267321	100	-	0	ID=FBgn0037549.2.mrna1.cds8;Name=FBgn0037549.2;Parent=FBgn0037549.2.mrna1;Target=FBgn0037549.2 1763 1663 .
Chr2	stalkie_big_nohaplotig	CDS	164266899	164267163	99	-	2	ID=FBgn0037549.2.mrna1.cds9;Name=FBgn0037549.2;Parent=FBgn0037549.2.mrna1;Target=FBgn0037549.2 2028 1764 .
Chr1	stalkie_big_nohaplotig	mRNA	159500427	159504766	.	-	.	ID=FBgn0031191.1.mrna1;Name=FBgn0031191.1;Parent=FBgn0031191.1.path1;Dir=sensecoverage=100.0;identity=99.2;matches=2338;mismatches=20;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	159504674	159504766	100	-	.	ID=FBgn0031191.1.mrna1.exon1;Name=FBgn0031191.1;Parent=FBgn0031191.1.mrna1;Target=FBgn0031191.1 1 93 +
Chr1	stalkie_big_nohaplotig	exon	159502642	159504525	99	-	.	ID=FBgn0031191.1.mrna1.exon2;Name=FBgn0031191.1;Parent=FBgn0031191.1.mrna1;Target=FBgn0031191.1 94 1977 +
Chr1	stalkie_big_nohaplotig	exon	159501913	159502149	98	-	.	ID=FBgn0031191.1.mrna1.exon3;Name=FBgn0031191.1;Parent=FBgn0031191.1.mrna1;Target=FBgn0031191.1 1978 2214 +
Chr1	stalkie_big_nohaplotig	exon	159500527	159500651	98	-	.	ID=FBgn0031191.1.mrna1.exon4;Name=FBgn0031191.1;Parent=FBgn0031191.1.mrna1;Target=FBgn0031191.1 2215 2339 +
Chr1	stalkie_big_nohaplotig	exon	159500427	159500445	100	-	.	ID=FBgn0031191.1.mrna1.exon5;Name=FBgn0031191.1;Parent=FBgn0031191.1.mrna1;Target=FBgn0031191.1 2340 2358 +
Chr1	stalkie_big_nohaplotig	CDS	159504674	159504766	100	-	0	ID=FBgn0031191.1.mrna1.cds1;Name=FBgn0031191.1;Parent=FBgn0031191.1.mrna1;Target=FBgn0031191.1 1 93 +
Chr1	stalkie_big_nohaplotig	CDS	159502642	159504525	99	-	0	ID=FBgn0031191.1.mrna1.cds2;Name=FBgn0031191.1;Parent=FBgn0031191.1.mrna1;Target=FBgn0031191.1 94 1977 +
Chr1	stalkie_big_nohaplotig	CDS	159501913	159502149	98	-	0	ID=FBgn0031191.1.mrna1.cds3;Name=FBgn0031191.1;Parent=FBgn0031191.1.mrna1;Target=FBgn0031191.1 1978 2214 +
Chr1	stalkie_big_nohaplotig	CDS	159500527	159500651	98	-	0	ID=FBgn0031191.1.mrna1.cds4;Name=FBgn0031191.1;Parent=FBgn0031191.1.mrna1;Target=FBgn0031191.1 2215 2339 +
Chr1	stalkie_big_nohaplotig	CDS	159500427	159500445	100	-	2	ID=FBgn0031191.1.mrna1.cds5;Name=FBgn0031191.1;Parent=FBgn0031191.1.mrna1;Target=FBgn0031191.1 2340 2358 +
Chr2	stalkie_big_nohaplotig	mRNA	145374042	145377222	.	+	.	ID=FBgn0051365.1.mrna1;Name=FBgn0051365.1;Parent=FBgn0051365.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2043;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	145374042	145375215	100	+	.	ID=FBgn0051365.1.mrna1.exon1;Name=FBgn0051365.1;Parent=FBgn0051365.1.mrna1;Target=FBgn0051365.1 1 1174 +
Chr2	stalkie_big_nohaplotig	exon	145376297	145376436	100	+	.	ID=FBgn0051365.1.mrna1.exon2;Name=FBgn0051365.1;Parent=FBgn0051365.1.mrna1;Target=FBgn0051365.1 1175 1314 +
Chr2	stalkie_big_nohaplotig	exon	145376494	145377222	100	+	.	ID=FBgn0051365.1.mrna1.exon3;Name=FBgn0051365.1;Parent=FBgn0051365.1.mrna1;Target=FBgn0051365.1 1315 2043 +
Chr2	stalkie_big_nohaplotig	CDS	145374042	145375215	100	+	0	ID=FBgn0051365.1.mrna1.cds1;Name=FBgn0051365.1;Parent=FBgn0051365.1.mrna1;Target=FBgn0051365.1 1 1174 +
Chr2	stalkie_big_nohaplotig	CDS	145376297	145376436	100	+	1	ID=FBgn0051365.1.mrna1.cds2;Name=FBgn0051365.1;Parent=FBgn0051365.1.mrna1;Target=FBgn0051365.1 1175 1314 +
Chr2	stalkie_big_nohaplotig	CDS	145376494	145377222	100	+	0	ID=FBgn0051365.1.mrna1.cds3;Name=FBgn0051365.1;Parent=FBgn0051365.1.mrna1;Target=FBgn0051365.1 1315 2043 +
Chr2	stalkie_big_nohaplotig	mRNA	67299186	67307999	.	-	.	ID=FBgn0039928.1.mrna1;Name=FBgn0039928.1;Parent=FBgn0039928.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3006;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	67307837	67307999	100	-	.	ID=FBgn0039928.1.mrna1.exon1;Name=FBgn0039928.1;Parent=FBgn0039928.1.mrna1;Target=FBgn0039928.1 1 163 +
Chr2	stalkie_big_nohaplotig	exon	67307621	67307763	100	-	.	ID=FBgn0039928.1.mrna1.exon2;Name=FBgn0039928.1;Parent=FBgn0039928.1.mrna1;Target=FBgn0039928.1 164 306 +
Chr2	stalkie_big_nohaplotig	exon	67307068	67307568	100	-	.	ID=FBgn0039928.1.mrna1.exon3;Name=FBgn0039928.1;Parent=FBgn0039928.1.mrna1;Target=FBgn0039928.1 307 807 +
Chr2	stalkie_big_nohaplotig	exon	67306889	67306996	100	-	.	ID=FBgn0039928.1.mrna1.exon4;Name=FBgn0039928.1;Parent=FBgn0039928.1.mrna1;Target=FBgn0039928.1 808 915 +
Chr2	stalkie_big_nohaplotig	exon	67303168	67304329	100	-	.	ID=FBgn0039928.1.mrna1.exon5;Name=FBgn0039928.1;Parent=FBgn0039928.1.mrna1;Target=FBgn0039928.1 916 2077 +
Chr2	stalkie_big_nohaplotig	exon	67302592	67303104	100	-	.	ID=FBgn0039928.1.mrna1.exon6;Name=FBgn0039928.1;Parent=FBgn0039928.1.mrna1;Target=FBgn0039928.1 2078 2590 +
Chr2	stalkie_big_nohaplotig	exon	67302432	67302515	100	-	.	ID=FBgn0039928.1.mrna1.exon7;Name=FBgn0039928.1;Parent=FBgn0039928.1.mrna1;Target=FBgn0039928.1 2591 2674 +
Chr2	stalkie_big_nohaplotig	exon	67302230	67302363	100	-	.	ID=FBgn0039928.1.mrna1.exon8;Name=FBgn0039928.1;Parent=FBgn0039928.1.mrna1;Target=FBgn0039928.1 2675 2808 +
Chr2	stalkie_big_nohaplotig	exon	67302055	67302178	100	-	.	ID=FBgn0039928.1.mrna1.exon9;Name=FBgn0039928.1;Parent=FBgn0039928.1.mrna1;Target=FBgn0039928.1 2809 2932 +
Chr2	stalkie_big_nohaplotig	exon	67299186	67299259	100	-	.	ID=FBgn0039928.1.mrna1.exon10;Name=FBgn0039928.1;Parent=FBgn0039928.1.mrna1;Target=FBgn0039928.1 2933 3006 +
Chr2	stalkie_big_nohaplotig	CDS	67307837	67307999	100	-	0	ID=FBgn0039928.1.mrna1.cds1;Name=FBgn0039928.1;Parent=FBgn0039928.1.mrna1;Target=FBgn0039928.1 1 163 +
Chr2	stalkie_big_nohaplotig	CDS	67307621	67307763	100	-	1	ID=FBgn0039928.1.mrna1.cds2;Name=FBgn0039928.1;Parent=FBgn0039928.1.mrna1;Target=FBgn0039928.1 164 306 +
Chr2	stalkie_big_nohaplotig	CDS	67307068	67307568	100	-	0	ID=FBgn0039928.1.mrna1.cds3;Name=FBgn0039928.1;Parent=FBgn0039928.1.mrna1;Target=FBgn0039928.1 307 807 +
Chr2	stalkie_big_nohaplotig	CDS	67306889	67306996	100	-	0	ID=FBgn0039928.1.mrna1.cds4;Name=FBgn0039928.1;Parent=FBgn0039928.1.mrna1;Target=FBgn0039928.1 808 915 +
Chr2	stalkie_big_nohaplotig	CDS	67303168	67304329	100	-	0	ID=FBgn0039928.1.mrna1.cds5;Name=FBgn0039928.1;Parent=FBgn0039928.1.mrna1;Target=FBgn0039928.1 916 2077 +
Chr2	stalkie_big_nohaplotig	CDS	67302592	67303104	100	-	1	ID=FBgn0039928.1.mrna1.cds6;Name=FBgn0039928.1;Parent=FBgn0039928.1.mrna1;Target=FBgn0039928.1 2078 2590 +
Chr2	stalkie_big_nohaplotig	CDS	67302432	67302515	100	-	1	ID=FBgn0039928.1.mrna1.cds7;Name=FBgn0039928.1;Parent=FBgn0039928.1.mrna1;Target=FBgn0039928.1 2591 2674 +
Chr2	stalkie_big_nohaplotig	CDS	67302230	67302363	100	-	1	ID=FBgn0039928.1.mrna1.cds8;Name=FBgn0039928.1;Parent=FBgn0039928.1.mrna1;Target=FBgn0039928.1 2675 2808 +
Chr2	stalkie_big_nohaplotig	CDS	67302055	67302178	100	-	0	ID=FBgn0039928.1.mrna1.cds9;Name=FBgn0039928.1;Parent=FBgn0039928.1.mrna1;Target=FBgn0039928.1 2809 2932 +
Chr2	stalkie_big_nohaplotig	CDS	67299186	67299259	100	-	1	ID=FBgn0039928.1.mrna1.cds10;Name=FBgn0039928.1;Parent=FBgn0039928.1.mrna1;Target=FBgn0039928.1 2933 3006 +
Chr1	stalkie_big_nohaplotig	mRNA	1213626	1217957	.	-	.	ID=FBgn0035942.1.mrna1;Name=FBgn0035942.1;Parent=FBgn0035942.1.path1;Dir=sensecoverage=100.0;identity=99.2;matches=2971;mismatches=23;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	1217807	1217957	99	-	.	ID=FBgn0035942.1.mrna1.exon1;Name=FBgn0035942.1;Parent=FBgn0035942.1.mrna1;Target=FBgn0035942.1 1 151 +
Chr1	stalkie_big_nohaplotig	exon	1217256	1217707	99	-	.	ID=FBgn0035942.1.mrna1.exon2;Name=FBgn0035942.1;Parent=FBgn0035942.1.mrna1;Target=FBgn0035942.1 152 603 +
Chr1	stalkie_big_nohaplotig	exon	1215936	1217201	98	-	.	ID=FBgn0035942.1.mrna1.exon3;Name=FBgn0035942.1;Parent=FBgn0035942.1.mrna1;Target=FBgn0035942.1 604 1869 +
Chr1	stalkie_big_nohaplotig	exon	1215430	1215879	100	-	.	ID=FBgn0035942.1.mrna1.exon4;Name=FBgn0035942.1;Parent=FBgn0035942.1.mrna1;Target=FBgn0035942.1 1870 2319 +
Chr1	stalkie_big_nohaplotig	exon	1214912	1215359	100	-	.	ID=FBgn0035942.1.mrna1.exon5;Name=FBgn0035942.1;Parent=FBgn0035942.1.mrna1;Target=FBgn0035942.1 2320 2767 +
Chr1	stalkie_big_nohaplotig	exon	1214673	1214851	99	-	.	ID=FBgn0035942.1.mrna1.exon6;Name=FBgn0035942.1;Parent=FBgn0035942.1.mrna1;Target=FBgn0035942.1 2768 2946 +
Chr1	stalkie_big_nohaplotig	exon	1213626	1213673	100	-	.	ID=FBgn0035942.1.mrna1.exon7;Name=FBgn0035942.1;Parent=FBgn0035942.1.mrna1;Target=FBgn0035942.1 2947 2994 +
Chr1	stalkie_big_nohaplotig	CDS	1217807	1217957	99	-	0	ID=FBgn0035942.1.mrna1.cds1;Name=FBgn0035942.1;Parent=FBgn0035942.1.mrna1;Target=FBgn0035942.1 1 151 +
Chr1	stalkie_big_nohaplotig	CDS	1217256	1217707	99	-	1	ID=FBgn0035942.1.mrna1.cds2;Name=FBgn0035942.1;Parent=FBgn0035942.1.mrna1;Target=FBgn0035942.1 152 603 +
Chr1	stalkie_big_nohaplotig	CDS	1215936	1217201	98	-	0	ID=FBgn0035942.1.mrna1.cds3;Name=FBgn0035942.1;Parent=FBgn0035942.1.mrna1;Target=FBgn0035942.1 604 1869 +
Chr1	stalkie_big_nohaplotig	CDS	1215430	1215879	100	-	0	ID=FBgn0035942.1.mrna1.cds4;Name=FBgn0035942.1;Parent=FBgn0035942.1.mrna1;Target=FBgn0035942.1 1870 2319 +
Chr1	stalkie_big_nohaplotig	CDS	1214912	1215359	100	-	0	ID=FBgn0035942.1.mrna1.cds5;Name=FBgn0035942.1;Parent=FBgn0035942.1.mrna1;Target=FBgn0035942.1 2320 2767 +
Chr1	stalkie_big_nohaplotig	CDS	1214673	1214851	99	-	1	ID=FBgn0035942.1.mrna1.cds6;Name=FBgn0035942.1;Parent=FBgn0035942.1.mrna1;Target=FBgn0035942.1 2768 2946 +
Chr1	stalkie_big_nohaplotig	CDS	1213626	1213673	100	-	0	ID=FBgn0035942.1.mrna1.cds7;Name=FBgn0035942.1;Parent=FBgn0035942.1.mrna1;Target=FBgn0035942.1 2947 2994 +
Chr1	stalkie_big_nohaplotig	mRNA	151582757	151584132	.	+	.	ID=FBgn0020369.1.mrna1;Name=FBgn0020369.1;Parent=FBgn0020369.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1234;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	151582757	151582801	100	+	.	ID=FBgn0020369.1.mrna1.exon1;Name=FBgn0020369.1;Parent=FBgn0020369.1.mrna1;Target=FBgn0020369.1 1 45 +
Chr1	stalkie_big_nohaplotig	exon	151582869	151583010	99	+	.	ID=FBgn0020369.1.mrna1.exon2;Name=FBgn0020369.1;Parent=FBgn0020369.1.mrna1;Target=FBgn0020369.1 46 187 +
Chr1	stalkie_big_nohaplotig	exon	151583081	151584132	99	+	.	ID=FBgn0020369.1.mrna1.exon3;Name=FBgn0020369.1;Parent=FBgn0020369.1.mrna1;Target=FBgn0020369.1 188 1239 +
Chr1	stalkie_big_nohaplotig	CDS	151582757	151582801	100	+	0	ID=FBgn0020369.1.mrna1.cds1;Name=FBgn0020369.1;Parent=FBgn0020369.1.mrna1;Target=FBgn0020369.1 1 45 +
Chr1	stalkie_big_nohaplotig	CDS	151582869	151583010	99	+	0	ID=FBgn0020369.1.mrna1.cds2;Name=FBgn0020369.1;Parent=FBgn0020369.1.mrna1;Target=FBgn0020369.1 46 187 +
Chr1	stalkie_big_nohaplotig	CDS	151583081	151584132	99	+	1	ID=FBgn0020369.1.mrna1.cds3;Name=FBgn0020369.1;Parent=FBgn0020369.1.mrna1;Target=FBgn0020369.1 188 1239 +
ChrX	stalkie_big_nohaplotig	mRNA	19600292	19602582	.	+	.	ID=FBgn0032249.1.mrna1;Name=FBgn0032249.1;Parent=FBgn0032249.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2169;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	19600292	19601278	100	+	.	ID=FBgn0032249.1.mrna1.exon1;Name=FBgn0032249.1;Parent=FBgn0032249.1.mrna1;Target=FBgn0032249.1 1 987 +
ChrX	stalkie_big_nohaplotig	exon	19601336	19601896	100	+	.	ID=FBgn0032249.1.mrna1.exon2;Name=FBgn0032249.1;Parent=FBgn0032249.1.mrna1;Target=FBgn0032249.1 988 1548 +
ChrX	stalkie_big_nohaplotig	exon	19601962	19602582	100	+	.	ID=FBgn0032249.1.mrna1.exon3;Name=FBgn0032249.1;Parent=FBgn0032249.1.mrna1;Target=FBgn0032249.1 1549 2169 +
ChrX	stalkie_big_nohaplotig	CDS	19600292	19601278	100	+	0	ID=FBgn0032249.1.mrna1.cds1;Name=FBgn0032249.1;Parent=FBgn0032249.1.mrna1;Target=FBgn0032249.1 1 987 +
ChrX	stalkie_big_nohaplotig	CDS	19601336	19601896	100	+	0	ID=FBgn0032249.1.mrna1.cds2;Name=FBgn0032249.1;Parent=FBgn0032249.1.mrna1;Target=FBgn0032249.1 988 1548 +
ChrX	stalkie_big_nohaplotig	CDS	19601962	19602582	100	+	0	ID=FBgn0032249.1.mrna1.cds3;Name=FBgn0032249.1;Parent=FBgn0032249.1.mrna1;Target=FBgn0032249.1 1549 2169 +
Chr1	stalkie_big_nohaplotig	mRNA	1574333	1644935	.	-	.	ID=FBgn0261801.1.mrna1;Name=FBgn0261801.1;Parent=FBgn0261801.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1292;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	1644389	1644935	99	-	.	ID=FBgn0261801.1.mrna1.exon1;Name=FBgn0261801.1;Parent=FBgn0261801.1.mrna1;Target=FBgn0261801.1 1 547 +
Chr1	stalkie_big_nohaplotig	exon	1594452	1594554	100	-	.	ID=FBgn0261801.1.mrna1.exon2;Name=FBgn0261801.1;Parent=FBgn0261801.1.mrna1;Target=FBgn0261801.1 548 650 +
Chr1	stalkie_big_nohaplotig	exon	1586380	1586402	100	-	.	ID=FBgn0261801.1.mrna1.exon3;Name=FBgn0261801.1;Parent=FBgn0261801.1.mrna1;Target=FBgn0261801.1 651 673 +
Chr1	stalkie_big_nohaplotig	exon	1574726	1575060	100	-	.	ID=FBgn0261801.1.mrna1.exon4;Name=FBgn0261801.1;Parent=FBgn0261801.1.mrna1;Target=FBgn0261801.1 674 1008 +
Chr1	stalkie_big_nohaplotig	exon	1574333	1574620	98	-	.	ID=FBgn0261801.1.mrna1.exon5;Name=FBgn0261801.1;Parent=FBgn0261801.1.mrna1;Target=FBgn0261801.1 1009 1296 +
Chr1	stalkie_big_nohaplotig	CDS	1644389	1644935	99	-	0	ID=FBgn0261801.1.mrna1.cds1;Name=FBgn0261801.1;Parent=FBgn0261801.1.mrna1;Target=FBgn0261801.1 1 547 +
Chr1	stalkie_big_nohaplotig	CDS	1594452	1594554	100	-	1	ID=FBgn0261801.1.mrna1.cds2;Name=FBgn0261801.1;Parent=FBgn0261801.1.mrna1;Target=FBgn0261801.1 548 650 +
Chr1	stalkie_big_nohaplotig	CDS	1586380	1586402	100	-	2	ID=FBgn0261801.1.mrna1.cds3;Name=FBgn0261801.1;Parent=FBgn0261801.1.mrna1;Target=FBgn0261801.1 651 673 +
Chr1	stalkie_big_nohaplotig	CDS	1574726	1575060	100	-	1	ID=FBgn0261801.1.mrna1.cds4;Name=FBgn0261801.1;Parent=FBgn0261801.1.mrna1;Target=FBgn0261801.1 674 1008 +
Chr1	stalkie_big_nohaplotig	CDS	1574333	1574620	98	-	0	ID=FBgn0261801.1.mrna1.cds5;Name=FBgn0261801.1;Parent=FBgn0261801.1.mrna1;Target=FBgn0261801.1 1009 1296 +
Chr1	stalkie_big_nohaplotig	mRNA	2951563	2984829	.	+	.	ID=FBgn0004569.1.mrna1;Name=FBgn0004569.1;Parent=FBgn0004569.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1128;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	2951563	2951655	100	+	.	ID=FBgn0004569.1.mrna1.exon1;Name=FBgn0004569.1;Parent=FBgn0004569.1.mrna1;Target=FBgn0004569.1 1 93 +
Chr1	stalkie_big_nohaplotig	exon	2983643	2984295	100	+	.	ID=FBgn0004569.1.mrna1.exon2;Name=FBgn0004569.1;Parent=FBgn0004569.1.mrna1;Target=FBgn0004569.1 94 746 +
Chr1	stalkie_big_nohaplotig	exon	2984361	2984532	100	+	.	ID=FBgn0004569.1.mrna1.exon3;Name=FBgn0004569.1;Parent=FBgn0004569.1.mrna1;Target=FBgn0004569.1 747 918 +
Chr1	stalkie_big_nohaplotig	exon	2984620	2984829	100	+	.	ID=FBgn0004569.1.mrna1.exon4;Name=FBgn0004569.1;Parent=FBgn0004569.1.mrna1;Target=FBgn0004569.1 919 1128 +
Chr1	stalkie_big_nohaplotig	CDS	2951563	2951655	100	+	0	ID=FBgn0004569.1.mrna1.cds1;Name=FBgn0004569.1;Parent=FBgn0004569.1.mrna1;Target=FBgn0004569.1 1 93 +
Chr1	stalkie_big_nohaplotig	CDS	2983643	2984295	100	+	0	ID=FBgn0004569.1.mrna1.cds2;Name=FBgn0004569.1;Parent=FBgn0004569.1.mrna1;Target=FBgn0004569.1 94 746 +
Chr1	stalkie_big_nohaplotig	CDS	2984361	2984532	100	+	2	ID=FBgn0004569.1.mrna1.cds3;Name=FBgn0004569.1;Parent=FBgn0004569.1.mrna1;Target=FBgn0004569.1 747 918 +
Chr1	stalkie_big_nohaplotig	CDS	2984620	2984829	100	+	0	ID=FBgn0004569.1.mrna1.cds4;Name=FBgn0004569.1;Parent=FBgn0004569.1.mrna1;Target=FBgn0004569.1 919 1128 +
Chr1	stalkie_big_nohaplotig	mRNA	5933888	5936328	.	+	.	ID=FBgn0020294.mrna1;Name=FBgn0020294;Parent=FBgn0020294.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1436;mismatches=0;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	5933888	5933942	98	+	.	ID=FBgn0020294.mrna1.exon1;Name=FBgn0020294;Parent=FBgn0020294.mrna1;Target=FBgn0020294 1 56 +
Chr1	stalkie_big_nohaplotig	exon	5934010	5934221	100	+	.	ID=FBgn0020294.mrna1.exon2;Name=FBgn0020294;Parent=FBgn0020294.mrna1;Target=FBgn0020294 57 268 +
Chr1	stalkie_big_nohaplotig	exon	5934294	5934518	100	+	.	ID=FBgn0020294.mrna1.exon3;Name=FBgn0020294;Parent=FBgn0020294.mrna1;Target=FBgn0020294 269 493 +
Chr1	stalkie_big_nohaplotig	exon	5935320	5935471	100	+	.	ID=FBgn0020294.mrna1.exon4;Name=FBgn0020294;Parent=FBgn0020294.mrna1;Target=FBgn0020294 494 645 +
Chr1	stalkie_big_nohaplotig	exon	5935537	5936328	100	+	.	ID=FBgn0020294.mrna1.exon5;Name=FBgn0020294;Parent=FBgn0020294.mrna1;Target=FBgn0020294 646 1437 +
Chr1	stalkie_big_nohaplotig	CDS	5933890	5933942	98	+	0	ID=FBgn0020294.mrna1.cds1;Name=FBgn0020294;Parent=FBgn0020294.mrna1;Target=FBgn0020294 3 56 +
Chr1	stalkie_big_nohaplotig	CDS	5934010	5934021	100	+	0	ID=FBgn0020294.mrna1.cds2;Name=FBgn0020294;Parent=FBgn0020294.mrna1;Target=FBgn0020294 57 68 +
Chr1	stalkie_big_nohaplotig	mRNA	5962484	5980616	.	-	.	ID=FBgn0004167.1.mrna2;Name=FBgn0004167.1;Parent=FBgn0004167.1.path2;Dir=sensecoverage=99.6;identity=99.8;matches=11073;mismatches=24;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	5980438	5980616	100	-	.	ID=FBgn0004167.1.mrna2.exon1;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 47 225 +
Chr1	stalkie_big_nohaplotig	exon	5980149	5980316	100	-	.	ID=FBgn0004167.1.mrna2.exon2;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 226 393 +
Chr1	stalkie_big_nohaplotig	exon	5974300	5974416	99	-	.	ID=FBgn0004167.1.mrna2.exon3;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 394 510 +
Chr1	stalkie_big_nohaplotig	exon	5973970	5974232	100	-	.	ID=FBgn0004167.1.mrna2.exon4;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 511 773 +
Chr1	stalkie_big_nohaplotig	exon	5973752	5973881	100	-	.	ID=FBgn0004167.1.mrna2.exon5;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 774 903 +
Chr1	stalkie_big_nohaplotig	exon	5973171	5973358	98	-	.	ID=FBgn0004167.1.mrna2.exon6;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 904 1091 +
Chr1	stalkie_big_nohaplotig	exon	5972334	5973113	99	-	.	ID=FBgn0004167.1.mrna2.exon7;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 1092 1871 +
Chr1	stalkie_big_nohaplotig	exon	5971684	5972275	100	-	.	ID=FBgn0004167.1.mrna2.exon8;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 1872 2463 +
Chr1	stalkie_big_nohaplotig	exon	5970474	5971549	98	-	.	ID=FBgn0004167.1.mrna2.exon9;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 2464 3539 +
Chr1	stalkie_big_nohaplotig	exon	5970258	5970404	99	-	.	ID=FBgn0004167.1.mrna2.exon10;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 3540 3686 +
Chr1	stalkie_big_nohaplotig	exon	5969818	5970196	99	-	.	ID=FBgn0004167.1.mrna2.exon11;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 3687 4065 +
Chr1	stalkie_big_nohaplotig	exon	5969614	5969753	100	-	.	ID=FBgn0004167.1.mrna2.exon12;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 4066 4205 +
Chr1	stalkie_big_nohaplotig	exon	5967934	5969544	99	-	.	ID=FBgn0004167.1.mrna2.exon13;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 4206 5816 +
Chr1	stalkie_big_nohaplotig	exon	5962484	5967810	100	-	.	ID=FBgn0004167.1.mrna2.exon14;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 5817 11143 +
Chr1	stalkie_big_nohaplotig	CDS	5980438	5980616	100	-	1	ID=FBgn0004167.1.mrna2.cds1;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 47 225 +
Chr1	stalkie_big_nohaplotig	CDS	5980149	5980316	100	-	0	ID=FBgn0004167.1.mrna2.cds2;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 226 393 +
Chr1	stalkie_big_nohaplotig	CDS	5974300	5974416	99	-	0	ID=FBgn0004167.1.mrna2.cds3;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 394 510 +
Chr1	stalkie_big_nohaplotig	CDS	5973970	5974232	100	-	0	ID=FBgn0004167.1.mrna2.cds4;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 511 773 +
Chr1	stalkie_big_nohaplotig	CDS	5973752	5973881	100	-	2	ID=FBgn0004167.1.mrna2.cds5;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 774 903 +
Chr1	stalkie_big_nohaplotig	CDS	5973171	5973358	98	-	0	ID=FBgn0004167.1.mrna2.cds6;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 904 1091 +
Chr1	stalkie_big_nohaplotig	CDS	5972334	5973113	99	-	2	ID=FBgn0004167.1.mrna2.cds7;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 1092 1871 +
Chr1	stalkie_big_nohaplotig	CDS	5971684	5972275	100	-	2	ID=FBgn0004167.1.mrna2.cds8;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 1872 2463 +
Chr1	stalkie_big_nohaplotig	CDS	5970474	5971549	98	-	0	ID=FBgn0004167.1.mrna2.cds9;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 2464 3539 +
Chr1	stalkie_big_nohaplotig	CDS	5970258	5970404	99	-	2	ID=FBgn0004167.1.mrna2.cds10;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 3540 3686 +
Chr1	stalkie_big_nohaplotig	CDS	5969818	5970196	99	-	2	ID=FBgn0004167.1.mrna2.cds11;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 3687 4065 +
Chr1	stalkie_big_nohaplotig	CDS	5969614	5969753	100	-	0	ID=FBgn0004167.1.mrna2.cds12;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 4066 4205 +
Chr1	stalkie_big_nohaplotig	CDS	5967934	5969544	99	-	2	ID=FBgn0004167.1.mrna2.cds13;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 4206 5816 +
Chr1	stalkie_big_nohaplotig	CDS	5962485	5967810	100	-	2	ID=FBgn0004167.1.mrna2.cds14;Name=FBgn0004167.1;Parent=FBgn0004167.1.mrna2;Target=FBgn0004167.1 5817 11142 +
Chr2	stalkie_big_nohaplotig	mRNA	81160515	81165755	.	+	.	ID=FBgn0005642.2.mrna1;Name=FBgn0005642.2;Parent=FBgn0005642.2.path1;Dir=sensecoverage=100.0;identity=99.3;matches=2092;mismatches=14;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	81160515	81161531	98	+	.	ID=FBgn0005642.2.mrna1.exon1;Name=FBgn0005642.2;Parent=FBgn0005642.2.mrna1;Target=FBgn0005642.2 1 1017 +
Chr2	stalkie_big_nohaplotig	exon	81161590	81162064	99	+	.	ID=FBgn0005642.2.mrna1.exon2;Name=FBgn0005642.2;Parent=FBgn0005642.2.mrna1;Target=FBgn0005642.2 1018 1492 +
Chr2	stalkie_big_nohaplotig	exon	81162188	81162308	98	+	.	ID=FBgn0005642.2.mrna1.exon3;Name=FBgn0005642.2;Parent=FBgn0005642.2.mrna1;Target=FBgn0005642.2 1493 1613 +
Chr2	stalkie_big_nohaplotig	exon	81165118	81165310	100	+	.	ID=FBgn0005642.2.mrna1.exon4;Name=FBgn0005642.2;Parent=FBgn0005642.2.mrna1;Target=FBgn0005642.2 1614 1806 +
Chr2	stalkie_big_nohaplotig	exon	81165399	81165522	100	+	.	ID=FBgn0005642.2.mrna1.exon5;Name=FBgn0005642.2;Parent=FBgn0005642.2.mrna1;Target=FBgn0005642.2 1807 1930 +
Chr2	stalkie_big_nohaplotig	exon	81165580	81165755	100	+	.	ID=FBgn0005642.2.mrna1.exon6;Name=FBgn0005642.2;Parent=FBgn0005642.2.mrna1;Target=FBgn0005642.2 1931 2106 +
Chr2	stalkie_big_nohaplotig	CDS	81160515	81161531	98	+	0	ID=FBgn0005642.2.mrna1.cds1;Name=FBgn0005642.2;Parent=FBgn0005642.2.mrna1;Target=FBgn0005642.2 1 1017 +
Chr2	stalkie_big_nohaplotig	CDS	81161590	81162064	99	+	0	ID=FBgn0005642.2.mrna1.cds2;Name=FBgn0005642.2;Parent=FBgn0005642.2.mrna1;Target=FBgn0005642.2 1018 1492 +
Chr2	stalkie_big_nohaplotig	CDS	81162188	81162308	98	+	1	ID=FBgn0005642.2.mrna1.cds3;Name=FBgn0005642.2;Parent=FBgn0005642.2.mrna1;Target=FBgn0005642.2 1493 1613 +
Chr2	stalkie_big_nohaplotig	CDS	81165118	81165310	100	+	2	ID=FBgn0005642.2.mrna1.cds4;Name=FBgn0005642.2;Parent=FBgn0005642.2.mrna1;Target=FBgn0005642.2 1614 1806 +
Chr2	stalkie_big_nohaplotig	CDS	81165399	81165522	100	+	0	ID=FBgn0005642.2.mrna1.cds5;Name=FBgn0005642.2;Parent=FBgn0005642.2.mrna1;Target=FBgn0005642.2 1807 1930 +
Chr2	stalkie_big_nohaplotig	CDS	81165580	81165755	100	+	1	ID=FBgn0005642.2.mrna1.cds6;Name=FBgn0005642.2;Parent=FBgn0005642.2.mrna1;Target=FBgn0005642.2 1931 2106 +
Chr2	stalkie_big_nohaplotig	mRNA	81156820	81157866	.	-	.	ID=FBgn0037661.1.mrna1;Name=FBgn0037661.1;Parent=FBgn0037661.1.path1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1042;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	81156820	81157866	99	-	.	ID=FBgn0037661.1.mrna1.exon1;Name=FBgn0037661.1;Parent=FBgn0037661.1.mrna1;Target=FBgn0037661.1 1047 1 .
Chr2	stalkie_big_nohaplotig	CDS	81156820	81157866	99	-	0	ID=FBgn0037661.1.mrna1.cds1;Name=FBgn0037661.1;Parent=FBgn0037661.1.mrna1;Target=FBgn0037661.1 1047 1 .
Chr1	stalkie_big_nohaplotig	mRNA	24922926	24924169	.	-	.	ID=FBgn0044872.3.mrna1;Name=FBgn0044872.3;Parent=FBgn0044872.3.path1;Dir=sensecoverage=98.1;identity=96.7;matches=1147;mismatches=24;indels=15;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	24923387	24924169	95	-	.	ID=FBgn0044872.3.mrna1.exon1;Name=FBgn0044872.3;Parent=FBgn0044872.3.mrna1;Target=FBgn0044872.3 24 791 +
Chr1	stalkie_big_nohaplotig	exon	24922926	24923328	98	-	.	ID=FBgn0044872.3.mrna1.exon2;Name=FBgn0044872.3;Parent=FBgn0044872.3.mrna1;Target=FBgn0044872.3 792 1194 +
Chr1	stalkie_big_nohaplotig	CDS	24923387	24924168	95	-	0	ID=FBgn0044872.3.mrna1.cds1;Name=FBgn0044872.3;Parent=FBgn0044872.3.mrna1;Target=FBgn0044872.3 25 791 +
Chr1	stalkie_big_nohaplotig	CDS	24922926	24923328	98	-	2	ID=FBgn0044872.3.mrna1.cds2;Name=FBgn0044872.3;Parent=FBgn0044872.3.mrna1;Target=FBgn0044872.3 792 1194 +
Chr1	stalkie_big_nohaplotig	mRNA	149630385	149633198	.	+	.	ID=FBgn0030847.1.mrna1;Name=FBgn0030847.1;Parent=FBgn0030847.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1385;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	149630385	149630460	100	+	.	ID=FBgn0030847.1.mrna1.exon1;Name=FBgn0030847.1;Parent=FBgn0030847.1.mrna1;Target=FBgn0030847.1 1 76 +
Chr1	stalkie_big_nohaplotig	exon	149630532	149631093	99	+	.	ID=FBgn0030847.1.mrna1.exon2;Name=FBgn0030847.1;Parent=FBgn0030847.1.mrna1;Target=FBgn0030847.1 77 638 +
Chr1	stalkie_big_nohaplotig	exon	149631179	149631638	100	+	.	ID=FBgn0030847.1.mrna1.exon3;Name=FBgn0030847.1;Parent=FBgn0030847.1.mrna1;Target=FBgn0030847.1 639 1098 +
Chr1	stalkie_big_nohaplotig	exon	149631701	149631880	100	+	.	ID=FBgn0030847.1.mrna1.exon4;Name=FBgn0030847.1;Parent=FBgn0030847.1.mrna1;Target=FBgn0030847.1 1099 1278 +
Chr1	stalkie_big_nohaplotig	exon	149633091	149633198	100	+	.	ID=FBgn0030847.1.mrna1.exon5;Name=FBgn0030847.1;Parent=FBgn0030847.1.mrna1;Target=FBgn0030847.1 1279 1386 +
Chr1	stalkie_big_nohaplotig	CDS	149630385	149630460	100	+	0	ID=FBgn0030847.1.mrna1.cds1;Name=FBgn0030847.1;Parent=FBgn0030847.1.mrna1;Target=FBgn0030847.1 1 76 +
Chr1	stalkie_big_nohaplotig	CDS	149630532	149631093	99	+	1	ID=FBgn0030847.1.mrna1.cds2;Name=FBgn0030847.1;Parent=FBgn0030847.1.mrna1;Target=FBgn0030847.1 77 638 +
Chr1	stalkie_big_nohaplotig	CDS	149631179	149631638	100	+	2	ID=FBgn0030847.1.mrna1.cds3;Name=FBgn0030847.1;Parent=FBgn0030847.1.mrna1;Target=FBgn0030847.1 639 1098 +
Chr1	stalkie_big_nohaplotig	CDS	149631701	149631880	100	+	0	ID=FBgn0030847.1.mrna1.cds4;Name=FBgn0030847.1;Parent=FBgn0030847.1.mrna1;Target=FBgn0030847.1 1099 1278 +
Chr1	stalkie_big_nohaplotig	CDS	149633091	149633198	100	+	0	ID=FBgn0030847.1.mrna1.cds5;Name=FBgn0030847.1;Parent=FBgn0030847.1.mrna1;Target=FBgn0030847.1 1279 1386 +
Chr2	stalkie_big_nohaplotig	mRNA	79312763	79313077	.	+	.	ID=FBgn0011701.mrna1;Name=FBgn0011701;Parent=FBgn0011701.path1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=314;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	79312763	79313077	99	+	.	ID=FBgn0011701.mrna1.exon1;Name=FBgn0011701;Parent=FBgn0011701.mrna1;Target=FBgn0011701 315 1 .
Chr2	stalkie_big_nohaplotig	CDS	79312763	79313077	99	+	0	ID=FBgn0011701.mrna1.cds1;Name=FBgn0011701;Parent=FBgn0011701.mrna1;Target=FBgn0011701 315 1 .
Chr2	stalkie_big_nohaplotig	mRNA	13489434	13490412	.	-	.	ID=ORF2430.mrna1;Name=ORF2430;Parent=ORF2430.path1;Dir=sensecoverage=99.2;identity=96.4;matches=823;mismatches=31;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	13490336	13490412	96	-	.	ID=ORF2430.mrna1.exon1;Name=ORF2430;Parent=ORF2430.mrna1;Target=ORF2430 8 84 +
Chr2	stalkie_big_nohaplotig	exon	13489918	13490277	98	-	.	ID=ORF2430.mrna1.exon2;Name=ORF2430;Parent=ORF2430.mrna1;Target=ORF2430 85 444 +
Chr2	stalkie_big_nohaplotig	exon	13489434	13489850	94	-	.	ID=ORF2430.mrna1.exon3;Name=ORF2430;Parent=ORF2430.mrna1;Target=ORF2430 445 861 +
Chr2	stalkie_big_nohaplotig	CDS	13490336	13490410	96	-	0	ID=ORF2430.mrna1.cds1;Name=ORF2430;Parent=ORF2430.mrna1;Target=ORF2430 10 84 +
Chr2	stalkie_big_nohaplotig	CDS	13489918	13490277	98	-	0	ID=ORF2430.mrna1.cds2;Name=ORF2430;Parent=ORF2430.mrna1;Target=ORF2430 85 444 +
Chr2	stalkie_big_nohaplotig	CDS	13489434	13489850	94	-	0	ID=ORF2430.mrna1.cds3;Name=ORF2430;Parent=ORF2430.mrna1;Target=ORF2430 445 861 +
Chr1	stalkie_big_nohaplotig	mRNA	25156512	25156638	.	-	.	ID=FBgn0011204.1.mrna1;Name=FBgn0011204.1;Parent=FBgn0011204.1.path1;Dir=indeterminatecoverage=6.3;identity=99.2;matches=126;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	25156512	25156638	99	-	.	ID=FBgn0011204.1.mrna1.exon1;Name=FBgn0011204.1;Parent=FBgn0011204.1.mrna1;Target=FBgn0011204.1 127 1 .
Chr1	stalkie_big_nohaplotig	CDS	25156512	25156638	99	-	0	ID=FBgn0011204.1.mrna1.cds1;Name=FBgn0011204.1;Parent=FBgn0011204.1.mrna1;Target=FBgn0011204.1 127 1 .
Chr1	stalkie_big_nohaplotig	mRNA	25057298	25059385	.	+	.	ID=FBgn0011204.1.mrna2;Name=FBgn0011204.1;Parent=FBgn0011204.1.path2;Dir=sensecoverage=93.7;identity=99.8;matches=1879;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	25057298	25058579	99	+	.	ID=FBgn0011204.1.mrna2.exon1;Name=FBgn0011204.1;Parent=FBgn0011204.1.mrna2;Target=FBgn0011204.1 128 1409 +
Chr1	stalkie_big_nohaplotig	exon	25058647	25058844	100	+	.	ID=FBgn0011204.1.mrna2.exon2;Name=FBgn0011204.1;Parent=FBgn0011204.1.mrna2;Target=FBgn0011204.1 1410 1607 +
Chr1	stalkie_big_nohaplotig	exon	25058916	25059219	99	+	.	ID=FBgn0011204.1.mrna2.exon3;Name=FBgn0011204.1;Parent=FBgn0011204.1.mrna2;Target=FBgn0011204.1 1608 1911 +
Chr1	stalkie_big_nohaplotig	exon	25059287	25059385	100	+	.	ID=FBgn0011204.1.mrna2.exon4;Name=FBgn0011204.1;Parent=FBgn0011204.1.mrna2;Target=FBgn0011204.1 1912 2010 +
Chr1	stalkie_big_nohaplotig	CDS	25057298	25058579	99	+	1	ID=FBgn0011204.1.mrna2.cds1;Name=FBgn0011204.1;Parent=FBgn0011204.1.mrna2;Target=FBgn0011204.1 128 1409 +
Chr1	stalkie_big_nohaplotig	CDS	25058647	25058844	100	+	2	ID=FBgn0011204.1.mrna2.cds2;Name=FBgn0011204.1;Parent=FBgn0011204.1.mrna2;Target=FBgn0011204.1 1410 1607 +
Chr1	stalkie_big_nohaplotig	CDS	25058916	25059219	99	+	2	ID=FBgn0011204.1.mrna2.cds3;Name=FBgn0011204.1;Parent=FBgn0011204.1.mrna2;Target=FBgn0011204.1 1608 1911 +
Chr1	stalkie_big_nohaplotig	CDS	25059287	25059385	100	+	0	ID=FBgn0011204.1.mrna2.cds4;Name=FBgn0011204.1;Parent=FBgn0011204.1.mrna2;Target=FBgn0011204.1 1912 2010 +
Chr1	stalkie_big_nohaplotig	mRNA	19728448	19744486	.	+	.	ID=FBgn0052486.1.mrna1;Name=FBgn0052486.1;Parent=FBgn0052486.1.path1;Dir=sensecoverage=99.2;identity=99.7;matches=1237;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	19728448	19728849	99	+	.	ID=FBgn0052486.1.mrna1.exon1;Name=FBgn0052486.1;Parent=FBgn0052486.1.mrna1;Target=FBgn0052486.1 1 402 +
Chr1	stalkie_big_nohaplotig	exon	19741737	19741795	100	+	.	ID=FBgn0052486.1.mrna1.exon2;Name=FBgn0052486.1;Parent=FBgn0052486.1.mrna1;Target=FBgn0052486.1 403 461 +
Chr1	stalkie_big_nohaplotig	exon	19741984	19742098	98	+	.	ID=FBgn0052486.1.mrna1.exon3;Name=FBgn0052486.1;Parent=FBgn0052486.1.mrna1;Target=FBgn0052486.1 462 576 +
Chr1	stalkie_big_nohaplotig	exon	19742217	19742340	100	+	.	ID=FBgn0052486.1.mrna1.exon4;Name=FBgn0052486.1;Parent=FBgn0052486.1.mrna1;Target=FBgn0052486.1 577 700 +
Chr1	stalkie_big_nohaplotig	exon	19742410	19742562	100	+	.	ID=FBgn0052486.1.mrna1.exon5;Name=FBgn0052486.1;Parent=FBgn0052486.1.mrna1;Target=FBgn0052486.1 701 853 +
Chr1	stalkie_big_nohaplotig	exon	19742634	19742794	99	+	.	ID=FBgn0052486.1.mrna1.exon6;Name=FBgn0052486.1;Parent=FBgn0052486.1.mrna1;Target=FBgn0052486.1 854 1014 +
Chr1	stalkie_big_nohaplotig	exon	19743030	19743146	100	+	.	ID=FBgn0052486.1.mrna1.exon7;Name=FBgn0052486.1;Parent=FBgn0052486.1.mrna1;Target=FBgn0052486.1 1015 1131 +
Chr1	stalkie_big_nohaplotig	exon	19744314	19744399	100	+	.	ID=FBgn0052486.1.mrna1.exon8;Name=FBgn0052486.1;Parent=FBgn0052486.1.mrna1;Target=FBgn0052486.1 1132 1217 +
Chr1	stalkie_big_nohaplotig	exon	19744463	19744486	100	+	.	ID=FBgn0052486.1.mrna1.exon9;Name=FBgn0052486.1;Parent=FBgn0052486.1.mrna1;Target=FBgn0052486.1 1218 1241 +
Chr1	stalkie_big_nohaplotig	CDS	19728448	19728849	99	+	0	ID=FBgn0052486.1.mrna1.cds1;Name=FBgn0052486.1;Parent=FBgn0052486.1.mrna1;Target=FBgn0052486.1 1 402 +
Chr1	stalkie_big_nohaplotig	CDS	19741737	19741795	100	+	0	ID=FBgn0052486.1.mrna1.cds2;Name=FBgn0052486.1;Parent=FBgn0052486.1.mrna1;Target=FBgn0052486.1 403 461 +
Chr1	stalkie_big_nohaplotig	CDS	19741984	19742098	98	+	2	ID=FBgn0052486.1.mrna1.cds3;Name=FBgn0052486.1;Parent=FBgn0052486.1.mrna1;Target=FBgn0052486.1 462 576 +
Chr1	stalkie_big_nohaplotig	CDS	19742217	19742340	100	+	0	ID=FBgn0052486.1.mrna1.cds4;Name=FBgn0052486.1;Parent=FBgn0052486.1.mrna1;Target=FBgn0052486.1 577 700 +
Chr1	stalkie_big_nohaplotig	CDS	19742410	19742562	100	+	1	ID=FBgn0052486.1.mrna1.cds5;Name=FBgn0052486.1;Parent=FBgn0052486.1.mrna1;Target=FBgn0052486.1 701 853 +
Chr1	stalkie_big_nohaplotig	CDS	19742634	19742794	99	+	1	ID=FBgn0052486.1.mrna1.cds6;Name=FBgn0052486.1;Parent=FBgn0052486.1.mrna1;Target=FBgn0052486.1 854 1014 +
Chr1	stalkie_big_nohaplotig	CDS	19743030	19743146	100	+	0	ID=FBgn0052486.1.mrna1.cds7;Name=FBgn0052486.1;Parent=FBgn0052486.1.mrna1;Target=FBgn0052486.1 1015 1131 +
Chr1	stalkie_big_nohaplotig	CDS	19744314	19744399	100	+	0	ID=FBgn0052486.1.mrna1.cds8;Name=FBgn0052486.1;Parent=FBgn0052486.1.mrna1;Target=FBgn0052486.1 1132 1217 +
Chr1	stalkie_big_nohaplotig	CDS	19744463	19744484	100	+	2	ID=FBgn0052486.1.mrna1.cds9;Name=FBgn0052486.1;Parent=FBgn0052486.1.mrna1;Target=FBgn0052486.1 1218 1239 +
Chr1	stalkie_big_nohaplotig	mRNA	25765937	25766363	.	+	.	ID=FBgn0035737.1.mrna1;Name=FBgn0035737.1;Parent=FBgn0035737.1.path1;Dir=sensecoverage=100.0;identity=99.1;matches=342;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	25765937	25765981	100	+	.	ID=FBgn0035737.1.mrna1.exon1;Name=FBgn0035737.1;Parent=FBgn0035737.1.mrna1;Target=FBgn0035737.1 1 45 +
Chr1	stalkie_big_nohaplotig	exon	25766064	25766363	99	+	.	ID=FBgn0035737.1.mrna1.exon2;Name=FBgn0035737.1;Parent=FBgn0035737.1.mrna1;Target=FBgn0035737.1 46 345 +
Chr1	stalkie_big_nohaplotig	CDS	25765937	25765981	100	+	0	ID=FBgn0035737.1.mrna1.cds1;Name=FBgn0035737.1;Parent=FBgn0035737.1.mrna1;Target=FBgn0035737.1 1 45 +
Chr1	stalkie_big_nohaplotig	CDS	25766064	25766363	99	+	0	ID=FBgn0035737.1.mrna1.cds2;Name=FBgn0035737.1;Parent=FBgn0035737.1.mrna1;Target=FBgn0035737.1 46 345 +
Chr1	stalkie_big_nohaplotig	mRNA	59194830	59271621	.	-	.	ID=FBgn0052085.mrna1;Name=FBgn0052085;Parent=FBgn0052085.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1123;mismatches=4;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	59271278	59271621	99	-	.	ID=FBgn0052085.mrna1.exon1;Name=FBgn0052085;Parent=FBgn0052085.mrna1;Target=FBgn0052085 1 345 +
Chr1	stalkie_big_nohaplotig	exon	59258330	59258503	99	-	.	ID=FBgn0052085.mrna1.exon2;Name=FBgn0052085;Parent=FBgn0052085.mrna1;Target=FBgn0052085 346 519 +
Chr1	stalkie_big_nohaplotig	exon	59258112	59258229	100	-	.	ID=FBgn0052085.mrna1.exon3;Name=FBgn0052085;Parent=FBgn0052085.mrna1;Target=FBgn0052085 520 637 +
Chr1	stalkie_big_nohaplotig	exon	59196544	59196739	100	-	.	ID=FBgn0052085.mrna1.exon4;Name=FBgn0052085;Parent=FBgn0052085.mrna1;Target=FBgn0052085 638 833 +
Chr1	stalkie_big_nohaplotig	exon	59194830	59195124	98	-	.	ID=FBgn0052085.mrna1.exon5;Name=FBgn0052085;Parent=FBgn0052085.mrna1;Target=FBgn0052085 834 1128 +
Chr1	stalkie_big_nohaplotig	CDS	59271591	59271619	96	-	0	ID=FBgn0052085.mrna1.cds1;Name=FBgn0052085;Parent=FBgn0052085.mrna1;Target=FBgn0052085 3 32 +
Chr1	stalkie_big_nohaplotig	mRNA	59285272	59286667	.	+	.	ID=FBgn0015828.1.mrna1;Name=FBgn0015828.1;Parent=FBgn0015828.1.path1;Dir=sensecoverage=100.0;identity=99.2;matches=1274;mismatches=10;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	59285272	59285936	98	+	.	ID=FBgn0015828.1.mrna1.exon1;Name=FBgn0015828.1;Parent=FBgn0015828.1.mrna1;Target=FBgn0015828.1 1 665 +
Chr1	stalkie_big_nohaplotig	exon	59285991	59286430	99	+	.	ID=FBgn0015828.1.mrna1.exon2;Name=FBgn0015828.1;Parent=FBgn0015828.1.mrna1;Target=FBgn0015828.1 666 1105 +
Chr1	stalkie_big_nohaplotig	exon	59286489	59286667	100	+	.	ID=FBgn0015828.1.mrna1.exon3;Name=FBgn0015828.1;Parent=FBgn0015828.1.mrna1;Target=FBgn0015828.1 1106 1284 +
Chr1	stalkie_big_nohaplotig	CDS	59285272	59285936	98	+	0	ID=FBgn0015828.1.mrna1.cds1;Name=FBgn0015828.1;Parent=FBgn0015828.1.mrna1;Target=FBgn0015828.1 1 665 +
Chr1	stalkie_big_nohaplotig	CDS	59285991	59286430	99	+	2	ID=FBgn0015828.1.mrna1.cds2;Name=FBgn0015828.1;Parent=FBgn0015828.1.mrna1;Target=FBgn0015828.1 666 1105 +
Chr1	stalkie_big_nohaplotig	CDS	59286489	59286667	100	+	1	ID=FBgn0015828.1.mrna1.cds3;Name=FBgn0015828.1;Parent=FBgn0015828.1.mrna1;Target=FBgn0015828.1 1106 1284 +
Chr1	stalkie_big_nohaplotig	mRNA	59302727	59304596	.	-	.	ID=FBgn0029993.1.mrna1;Name=FBgn0029993.1;Parent=FBgn0029993.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1805;mismatches=0;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	59303046	59304596	100	-	.	ID=FBgn0029993.1.mrna1.exon1;Name=FBgn0029993.1;Parent=FBgn0029993.1.mrna1;Target=FBgn0029993.1 1 1551 +
Chr1	stalkie_big_nohaplotig	exon	59302727	59302980	99	-	.	ID=FBgn0029993.1.mrna1.exon2;Name=FBgn0029993.1;Parent=FBgn0029993.1.mrna1;Target=FBgn0029993.1 1552 1806 +
Chr1	stalkie_big_nohaplotig	CDS	59303046	59304596	100	-	0	ID=FBgn0029993.1.mrna1.cds1;Name=FBgn0029993.1;Parent=FBgn0029993.1.mrna1;Target=FBgn0029993.1 1 1551 +
Chr1	stalkie_big_nohaplotig	CDS	59302727	59302980	99	-	0	ID=FBgn0029993.1.mrna1.cds2;Name=FBgn0029993.1;Parent=FBgn0029993.1.mrna1;Target=FBgn0029993.1 1552 1806 +
Chr2	stalkie_big_nohaplotig	mRNA	25304471	25304984	.	-	.	ID=FBgn0037121.2.mrna1;Name=FBgn0037121.2;Parent=FBgn0037121.2.path1;Dir=sensecoverage=99.8;identity=99.8;matches=463;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	25304951	25304984	100	-	.	ID=FBgn0037121.2.mrna1.exon1;Name=FBgn0037121.2;Parent=FBgn0037121.2.mrna1;Target=FBgn0037121.2 1 34 +
Chr2	stalkie_big_nohaplotig	exon	25304471	25304900	99	-	.	ID=FBgn0037121.2.mrna1.exon2;Name=FBgn0037121.2;Parent=FBgn0037121.2.mrna1;Target=FBgn0037121.2 35 464 +
Chr2	stalkie_big_nohaplotig	CDS	25304951	25304984	100	-	0	ID=FBgn0037121.2.mrna1.cds1;Name=FBgn0037121.2;Parent=FBgn0037121.2.mrna1;Target=FBgn0037121.2 1 34 +
Chr2	stalkie_big_nohaplotig	CDS	25304473	25304900	99	-	1	ID=FBgn0037121.2.mrna1.cds2;Name=FBgn0037121.2;Parent=FBgn0037121.2.mrna1;Target=FBgn0037121.2 35 462 +
Chr2	stalkie_big_nohaplotig	mRNA	25352365	25363105	.	+	.	ID=FBgn0001325.2.mrna1;Name=FBgn0001325.2;Parent=FBgn0001325.2.path1;Dir=sensecoverage=100.0;identity=99.1;matches=1531;mismatches=5;indels=9;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	25352365	25352479	91	+	.	ID=FBgn0001325.2.mrna1.exon1;Name=FBgn0001325.2;Parent=FBgn0001325.2.mrna1;Target=FBgn0001325.2 1 124 +
Chr2	stalkie_big_nohaplotig	exon	25361685	25363105	99	+	.	ID=FBgn0001325.2.mrna1.exon2;Name=FBgn0001325.2;Parent=FBgn0001325.2.mrna1;Target=FBgn0001325.2 125 1545 +
Chr2	stalkie_big_nohaplotig	CDS	25352365	25352479	91	+	0	ID=FBgn0001325.2.mrna1.cds1;Name=FBgn0001325.2;Parent=FBgn0001325.2.mrna1;Target=FBgn0001325.2 1 124 +
Chr2	stalkie_big_nohaplotig	CDS	25361685	25363105	99	+	1	ID=FBgn0001325.2.mrna1.cds2;Name=FBgn0001325.2;Parent=FBgn0001325.2.mrna1;Target=FBgn0001325.2 125 1545 +
Chr2	stalkie_big_nohaplotig	mRNA	156348034	156436856	.	+	.	ID=FBgn0015542.1.mrna1;Name=FBgn0015542.1;Parent=FBgn0015542.1.path1;Dir=sensecoverage=95.0;identity=99.5;matches=3001;mismatches=5;indels=9;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	156348034	156348221	100	+	.	ID=FBgn0015542.1.mrna1.exon1;Name=FBgn0015542.1;Parent=FBgn0015542.1.mrna1;Target=FBgn0015542.1 138 325 +
Chr2	stalkie_big_nohaplotig	exon	156348284	156348537	100	+	.	ID=FBgn0015542.1.mrna1.exon2;Name=FBgn0015542.1;Parent=FBgn0015542.1.mrna1;Target=FBgn0015542.1 326 579 +
Chr2	stalkie_big_nohaplotig	exon	156348604	156348828	100	+	.	ID=FBgn0015542.1.mrna1.exon3;Name=FBgn0015542.1;Parent=FBgn0015542.1.mrna1;Target=FBgn0015542.1 580 804 +
Chr2	stalkie_big_nohaplotig	exon	156348896	156349062	100	+	.	ID=FBgn0015542.1.mrna1.exon4;Name=FBgn0015542.1;Parent=FBgn0015542.1.mrna1;Target=FBgn0015542.1 805 971 +
Chr2	stalkie_big_nohaplotig	exon	156349132	156349238	100	+	.	ID=FBgn0015542.1.mrna1.exon5;Name=FBgn0015542.1;Parent=FBgn0015542.1.mrna1;Target=FBgn0015542.1 972 1078 +
Chr2	stalkie_big_nohaplotig	exon	156382303	156382444	100	+	.	ID=FBgn0015542.1.mrna1.exon6;Name=FBgn0015542.1;Parent=FBgn0015542.1.mrna1;Target=FBgn0015542.1 1079 1220 +
Chr2	stalkie_big_nohaplotig	exon	156424468	156425426	98	+	.	ID=FBgn0015542.1.mrna1.exon7;Name=FBgn0015542.1;Parent=FBgn0015542.1.mrna1;Target=FBgn0015542.1 1221 2176 +
Chr2	stalkie_big_nohaplotig	exon	156435624	156435988	100	+	.	ID=FBgn0015542.1.mrna1.exon8;Name=FBgn0015542.1;Parent=FBgn0015542.1.mrna1;Target=FBgn0015542.1 2177 2541 +
Chr2	stalkie_big_nohaplotig	exon	156436252	156436856	100	+	.	ID=FBgn0015542.1.mrna1.exon9;Name=FBgn0015542.1;Parent=FBgn0015542.1.mrna1;Target=FBgn0015542.1 2542 3146 +
Chr2	stalkie_big_nohaplotig	CDS	156348035	156348221	100	+	0	ID=FBgn0015542.1.mrna1.cds1;Name=FBgn0015542.1;Parent=FBgn0015542.1.mrna1;Target=FBgn0015542.1 139 325 +
Chr2	stalkie_big_nohaplotig	CDS	156348284	156348537	100	+	1	ID=FBgn0015542.1.mrna1.cds2;Name=FBgn0015542.1;Parent=FBgn0015542.1.mrna1;Target=FBgn0015542.1 326 579 +
Chr2	stalkie_big_nohaplotig	CDS	156348604	156348828	100	+	0	ID=FBgn0015542.1.mrna1.cds3;Name=FBgn0015542.1;Parent=FBgn0015542.1.mrna1;Target=FBgn0015542.1 580 804 +
Chr2	stalkie_big_nohaplotig	CDS	156348896	156349062	100	+	0	ID=FBgn0015542.1.mrna1.cds4;Name=FBgn0015542.1;Parent=FBgn0015542.1.mrna1;Target=FBgn0015542.1 805 971 +
Chr2	stalkie_big_nohaplotig	CDS	156349132	156349238	100	+	2	ID=FBgn0015542.1.mrna1.cds5;Name=FBgn0015542.1;Parent=FBgn0015542.1.mrna1;Target=FBgn0015542.1 972 1078 +
Chr2	stalkie_big_nohaplotig	CDS	156382303	156382444	100	+	1	ID=FBgn0015542.1.mrna1.cds6;Name=FBgn0015542.1;Parent=FBgn0015542.1.mrna1;Target=FBgn0015542.1 1079 1220 +
Chr2	stalkie_big_nohaplotig	CDS	156424468	156425426	98	+	2	ID=FBgn0015542.1.mrna1.cds7;Name=FBgn0015542.1;Parent=FBgn0015542.1.mrna1;Target=FBgn0015542.1 1221 2176 +
Chr2	stalkie_big_nohaplotig	CDS	156435624	156435988	100	+	1	ID=FBgn0015542.1.mrna1.cds8;Name=FBgn0015542.1;Parent=FBgn0015542.1.mrna1;Target=FBgn0015542.1 2177 2541 +
Chr2	stalkie_big_nohaplotig	CDS	156436252	156436854	100	+	0	ID=FBgn0015542.1.mrna1.cds9;Name=FBgn0015542.1;Parent=FBgn0015542.1.mrna1;Target=FBgn0015542.1 2542 3144 +
Chr1	stalkie_big_nohaplotig	mRNA	3547697	3549505	.	+	.	ID=FBgn0000592.2.mrna1;Name=FBgn0000592.2;Parent=FBgn0000592.2.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1686;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	3547697	3549137	100	+	.	ID=FBgn0000592.2.mrna1.exon1;Name=FBgn0000592.2;Parent=FBgn0000592.2.mrna1;Target=FBgn0000592.2 1 1441 +
Chr1	stalkie_big_nohaplotig	exon	3549201	3549327	100	+	.	ID=FBgn0000592.2.mrna1.exon2;Name=FBgn0000592.2;Parent=FBgn0000592.2.mrna1;Target=FBgn0000592.2 1442 1568 +
Chr1	stalkie_big_nohaplotig	exon	3549388	3549505	100	+	.	ID=FBgn0000592.2.mrna1.exon3;Name=FBgn0000592.2;Parent=FBgn0000592.2.mrna1;Target=FBgn0000592.2 1569 1686 +
Chr1	stalkie_big_nohaplotig	CDS	3547697	3549137	100	+	0	ID=FBgn0000592.2.mrna1.cds1;Name=FBgn0000592.2;Parent=FBgn0000592.2.mrna1;Target=FBgn0000592.2 1 1441 +
Chr1	stalkie_big_nohaplotig	CDS	3549201	3549327	100	+	1	ID=FBgn0000592.2.mrna1.cds2;Name=FBgn0000592.2;Parent=FBgn0000592.2.mrna1;Target=FBgn0000592.2 1442 1568 +
Chr1	stalkie_big_nohaplotig	CDS	3549388	3549505	100	+	2	ID=FBgn0000592.2.mrna1.cds3;Name=FBgn0000592.2;Parent=FBgn0000592.2.mrna1;Target=FBgn0000592.2 1569 1686 +
Chr1	stalkie_big_nohaplotig	mRNA	3535852	3536709	.	-	.	ID=FBgn0032516.1.mrna1;Name=FBgn0032516.1;Parent=FBgn0032516.1.path1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=854;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	3535852	3536709	99	-	.	ID=FBgn0032516.1.mrna1.exon1;Name=FBgn0032516.1;Parent=FBgn0032516.1.mrna1;Target=FBgn0032516.1 858 1 .
Chr1	stalkie_big_nohaplotig	CDS	3535852	3536709	99	-	0	ID=FBgn0032516.1.mrna1.cds1;Name=FBgn0032516.1;Parent=FBgn0032516.1.mrna1;Target=FBgn0032516.1 858 1 .
Chr2	stalkie_big_nohaplotig	mRNA	119313947	119340562	.	+	.	ID=FBgn0039584.1.mrna1;Name=FBgn0039584.1;Parent=FBgn0039584.1.path1;Dir=sensecoverage=99.3;identity=100.0;matches=1037;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	119313947	119314075	100	+	.	ID=FBgn0039584.1.mrna1.exon1;Name=FBgn0039584.1;Parent=FBgn0039584.1.mrna1;Target=FBgn0039584.1 8 136 +
Chr2	stalkie_big_nohaplotig	exon	119318500	119318591	100	+	.	ID=FBgn0039584.1.mrna1.exon2;Name=FBgn0039584.1;Parent=FBgn0039584.1.mrna1;Target=FBgn0039584.1 137 228 +
Chr2	stalkie_big_nohaplotig	exon	119318867	119318977	100	+	.	ID=FBgn0039584.1.mrna1.exon3;Name=FBgn0039584.1;Parent=FBgn0039584.1.mrna1;Target=FBgn0039584.1 229 339 +
Chr2	stalkie_big_nohaplotig	exon	119339080	119339349	100	+	.	ID=FBgn0039584.1.mrna1.exon4;Name=FBgn0039584.1;Parent=FBgn0039584.1.mrna1;Target=FBgn0039584.1 340 609 +
Chr2	stalkie_big_nohaplotig	exon	119340128	119340562	100	+	.	ID=FBgn0039584.1.mrna1.exon5;Name=FBgn0039584.1;Parent=FBgn0039584.1.mrna1;Target=FBgn0039584.1 610 1044 +
Chr2	stalkie_big_nohaplotig	CDS	119313949	119314075	100	+	0	ID=FBgn0039584.1.mrna1.cds1;Name=FBgn0039584.1;Parent=FBgn0039584.1.mrna1;Target=FBgn0039584.1 10 136 +
Chr2	stalkie_big_nohaplotig	CDS	119318500	119318591	100	+	1	ID=FBgn0039584.1.mrna1.cds2;Name=FBgn0039584.1;Parent=FBgn0039584.1.mrna1;Target=FBgn0039584.1 137 228 +
Chr2	stalkie_big_nohaplotig	CDS	119318867	119318977	100	+	0	ID=FBgn0039584.1.mrna1.cds3;Name=FBgn0039584.1;Parent=FBgn0039584.1.mrna1;Target=FBgn0039584.1 229 339 +
Chr2	stalkie_big_nohaplotig	CDS	119339080	119339349	100	+	0	ID=FBgn0039584.1.mrna1.cds4;Name=FBgn0039584.1;Parent=FBgn0039584.1.mrna1;Target=FBgn0039584.1 340 609 +
Chr2	stalkie_big_nohaplotig	CDS	119340128	119340562	100	+	0	ID=FBgn0039584.1.mrna1.cds5;Name=FBgn0039584.1;Parent=FBgn0039584.1.mrna1;Target=FBgn0039584.1 610 1044 +
Chr1	stalkie_big_nohaplotig	mRNA	55628373	55629854	.	+	.	ID=FBgn0041094.1.mrna1;Name=FBgn0041094.1;Parent=FBgn0041094.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=858;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	55628373	55628493	100	+	.	ID=FBgn0041094.1.mrna1.exon1;Name=FBgn0041094.1;Parent=FBgn0041094.1.mrna1;Target=FBgn0041094.1 1 121 +
Chr1	stalkie_big_nohaplotig	exon	55629118	55629854	100	+	.	ID=FBgn0041094.1.mrna1.exon2;Name=FBgn0041094.1;Parent=FBgn0041094.1.mrna1;Target=FBgn0041094.1 122 858 +
Chr1	stalkie_big_nohaplotig	CDS	55628373	55628493	100	+	0	ID=FBgn0041094.1.mrna1.cds1;Name=FBgn0041094.1;Parent=FBgn0041094.1.mrna1;Target=FBgn0041094.1 1 121 +
Chr1	stalkie_big_nohaplotig	CDS	55629118	55629854	100	+	1	ID=FBgn0041094.1.mrna1.cds2;Name=FBgn0041094.1;Parent=FBgn0041094.1.mrna1;Target=FBgn0041094.1 122 858 +
Chr1	stalkie_big_nohaplotig	mRNA	95175774	95179300	.	-	.	ID=FBgn0001341.1.mrna1;Name=FBgn0001341.1;Parent=FBgn0001341.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=3298;mismatches=3;indels=0;unknowns=1
Chr1	stalkie_big_nohaplotig	exon	95179037	95179300	100	-	.	ID=FBgn0001341.1.mrna1.exon1;Name=FBgn0001341.1;Parent=FBgn0001341.1.mrna1;Target=FBgn0001341.1 1 264 +
Chr1	stalkie_big_nohaplotig	exon	95178795	95178986	100	-	.	ID=FBgn0001341.1.mrna1.exon2;Name=FBgn0001341.1;Parent=FBgn0001341.1.mrna1;Target=FBgn0001341.1 265 456 +
Chr1	stalkie_big_nohaplotig	exon	95178553	95178735	100	-	.	ID=FBgn0001341.1.mrna1.exon3;Name=FBgn0001341.1;Parent=FBgn0001341.1.mrna1;Target=FBgn0001341.1 457 639 +
Chr1	stalkie_big_nohaplotig	exon	95177153	95178496	100	-	.	ID=FBgn0001341.1.mrna1.exon4;Name=FBgn0001341.1;Parent=FBgn0001341.1.mrna1;Target=FBgn0001341.1 640 1983 +
Chr1	stalkie_big_nohaplotig	exon	95175774	95177092	99	-	.	ID=FBgn0001341.1.mrna1.exon5;Name=FBgn0001341.1;Parent=FBgn0001341.1.mrna1;Target=FBgn0001341.1 1984 3302 +
Chr1	stalkie_big_nohaplotig	CDS	95179037	95179300	100	-	0	ID=FBgn0001341.1.mrna1.cds1;Name=FBgn0001341.1;Parent=FBgn0001341.1.mrna1;Target=FBgn0001341.1 1 264 +
Chr1	stalkie_big_nohaplotig	CDS	95178795	95178986	100	-	0	ID=FBgn0001341.1.mrna1.cds2;Name=FBgn0001341.1;Parent=FBgn0001341.1.mrna1;Target=FBgn0001341.1 265 456 +
Chr1	stalkie_big_nohaplotig	CDS	95178553	95178735	100	-	0	ID=FBgn0001341.1.mrna1.cds3;Name=FBgn0001341.1;Parent=FBgn0001341.1.mrna1;Target=FBgn0001341.1 457 639 +
Chr1	stalkie_big_nohaplotig	CDS	95177153	95178496	100	-	0	ID=FBgn0001341.1.mrna1.cds4;Name=FBgn0001341.1;Parent=FBgn0001341.1.mrna1;Target=FBgn0001341.1 640 1983 +
Chr1	stalkie_big_nohaplotig	CDS	95175776	95177092	99	-	0	ID=FBgn0001341.1.mrna1.cds5;Name=FBgn0001341.1;Parent=FBgn0001341.1.mrna1;Target=FBgn0001341.1 1984 3300 +
Chr2	stalkie_big_nohaplotig	mRNA	75551288	75564641	.	-	.	ID=FBgn0003093.1.mrna1;Name=FBgn0003093.1;Parent=FBgn0003093.1.path1;Dir=sensecoverage=99.5;identity=100.0;matches=2207;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	75564456	75564641	100	-	.	ID=FBgn0003093.1.mrna1.exon1;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 11 196 +
Chr2	stalkie_big_nohaplotig	exon	75564198	75564391	100	-	.	ID=FBgn0003093.1.mrna1.exon2;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 197 390 +
Chr2	stalkie_big_nohaplotig	exon	75564081	75564138	100	-	.	ID=FBgn0003093.1.mrna1.exon3;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 391 448 +
Chr2	stalkie_big_nohaplotig	exon	75563901	75564013	100	-	.	ID=FBgn0003093.1.mrna1.exon4;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 449 561 +
Chr2	stalkie_big_nohaplotig	exon	75563752	75563825	100	-	.	ID=FBgn0003093.1.mrna1.exon5;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 562 635 +
Chr2	stalkie_big_nohaplotig	exon	75563119	75563150	100	-	.	ID=FBgn0003093.1.mrna1.exon6;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 636 667 +
Chr2	stalkie_big_nohaplotig	exon	75553218	75553288	100	-	.	ID=FBgn0003093.1.mrna1.exon7;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 668 738 +
Chr2	stalkie_big_nohaplotig	exon	75552874	75553161	100	-	.	ID=FBgn0003093.1.mrna1.exon8;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 739 1026 +
Chr2	stalkie_big_nohaplotig	exon	75552395	75552805	100	-	.	ID=FBgn0003093.1.mrna1.exon9;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 1027 1437 +
Chr2	stalkie_big_nohaplotig	exon	75552080	75552307	100	-	.	ID=FBgn0003093.1.mrna1.exon10;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 1438 1665 +
Chr2	stalkie_big_nohaplotig	exon	75551770	75552022	100	-	.	ID=FBgn0003093.1.mrna1.exon11;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 1666 1918 +
Chr2	stalkie_big_nohaplotig	exon	75551514	75551653	100	-	.	ID=FBgn0003093.1.mrna1.exon12;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 1919 2058 +
Chr2	stalkie_big_nohaplotig	exon	75551288	75551446	100	-	.	ID=FBgn0003093.1.mrna1.exon13;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 2059 2217 +
Chr2	stalkie_big_nohaplotig	CDS	75564456	75564639	100	-	0	ID=FBgn0003093.1.mrna1.cds1;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 13 196 +
Chr2	stalkie_big_nohaplotig	CDS	75564198	75564391	100	-	1	ID=FBgn0003093.1.mrna1.cds2;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 197 390 +
Chr2	stalkie_big_nohaplotig	CDS	75564081	75564138	100	-	0	ID=FBgn0003093.1.mrna1.cds3;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 391 448 +
Chr2	stalkie_big_nohaplotig	CDS	75563901	75564013	100	-	1	ID=FBgn0003093.1.mrna1.cds4;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 449 561 +
Chr2	stalkie_big_nohaplotig	CDS	75563752	75563825	100	-	0	ID=FBgn0003093.1.mrna1.cds5;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 562 635 +
Chr2	stalkie_big_nohaplotig	CDS	75563119	75563150	100	-	2	ID=FBgn0003093.1.mrna1.cds6;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 636 667 +
Chr2	stalkie_big_nohaplotig	CDS	75553218	75553288	100	-	1	ID=FBgn0003093.1.mrna1.cds7;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 668 738 +
Chr2	stalkie_big_nohaplotig	CDS	75552874	75553161	100	-	0	ID=FBgn0003093.1.mrna1.cds8;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 739 1026 +
Chr2	stalkie_big_nohaplotig	CDS	75552395	75552805	100	-	0	ID=FBgn0003093.1.mrna1.cds9;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 1027 1437 +
Chr2	stalkie_big_nohaplotig	CDS	75552080	75552307	100	-	0	ID=FBgn0003093.1.mrna1.cds10;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 1438 1665 +
Chr2	stalkie_big_nohaplotig	CDS	75551770	75552022	100	-	0	ID=FBgn0003093.1.mrna1.cds11;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 1666 1918 +
Chr2	stalkie_big_nohaplotig	CDS	75551514	75551653	100	-	1	ID=FBgn0003093.1.mrna1.cds12;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 1919 2058 +
Chr2	stalkie_big_nohaplotig	CDS	75551288	75551446	100	-	0	ID=FBgn0003093.1.mrna1.cds13;Name=FBgn0003093.1;Parent=FBgn0003093.1.mrna1;Target=FBgn0003093.1 2059 2217 +
Chr2	stalkie_big_nohaplotig	mRNA	75520860	75523677	.	+	.	ID=FBgn0039623.1.mrna1;Name=FBgn0039623.1;Parent=FBgn0039623.1.path1;Dir=sensecoverage=99.8;identity=100.0;matches=2284;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	75520860	75521034	100	+	.	ID=FBgn0039623.1.mrna1.exon1;Name=FBgn0039623.1;Parent=FBgn0039623.1.mrna1;Target=FBgn0039623.1 1 175 +
Chr2	stalkie_big_nohaplotig	exon	75521094	75521693	100	+	.	ID=FBgn0039623.1.mrna1.exon2;Name=FBgn0039623.1;Parent=FBgn0039623.1.mrna1;Target=FBgn0039623.1 176 775 +
Chr2	stalkie_big_nohaplotig	exon	75521801	75522003	100	+	.	ID=FBgn0039623.1.mrna1.exon3;Name=FBgn0039623.1;Parent=FBgn0039623.1.mrna1;Target=FBgn0039623.1 776 978 +
Chr2	stalkie_big_nohaplotig	exon	75522064	75522736	100	+	.	ID=FBgn0039623.1.mrna1.exon4;Name=FBgn0039623.1;Parent=FBgn0039623.1.mrna1;Target=FBgn0039623.1 979 1651 +
Chr2	stalkie_big_nohaplotig	exon	75522800	75523019	100	+	.	ID=FBgn0039623.1.mrna1.exon5;Name=FBgn0039623.1;Parent=FBgn0039623.1.mrna1;Target=FBgn0039623.1 1652 1871 +
Chr2	stalkie_big_nohaplotig	exon	75523211	75523393	100	+	.	ID=FBgn0039623.1.mrna1.exon6;Name=FBgn0039623.1;Parent=FBgn0039623.1.mrna1;Target=FBgn0039623.1 1872 2054 +
Chr2	stalkie_big_nohaplotig	exon	75523448	75523677	100	+	.	ID=FBgn0039623.1.mrna1.exon7;Name=FBgn0039623.1;Parent=FBgn0039623.1.mrna1;Target=FBgn0039623.1 2055 2284 +
Chr2	stalkie_big_nohaplotig	CDS	75520860	75521034	100	+	0	ID=FBgn0039623.1.mrna1.cds1;Name=FBgn0039623.1;Parent=FBgn0039623.1.mrna1;Target=FBgn0039623.1 1 175 +
Chr2	stalkie_big_nohaplotig	CDS	75521094	75521693	100	+	1	ID=FBgn0039623.1.mrna1.cds2;Name=FBgn0039623.1;Parent=FBgn0039623.1.mrna1;Target=FBgn0039623.1 176 775 +
Chr2	stalkie_big_nohaplotig	CDS	75521801	75522003	100	+	1	ID=FBgn0039623.1.mrna1.cds3;Name=FBgn0039623.1;Parent=FBgn0039623.1.mrna1;Target=FBgn0039623.1 776 978 +
Chr2	stalkie_big_nohaplotig	CDS	75522064	75522736	100	+	0	ID=FBgn0039623.1.mrna1.cds4;Name=FBgn0039623.1;Parent=FBgn0039623.1.mrna1;Target=FBgn0039623.1 979 1651 +
Chr2	stalkie_big_nohaplotig	CDS	75522800	75523019	100	+	1	ID=FBgn0039623.1.mrna1.cds5;Name=FBgn0039623.1;Parent=FBgn0039623.1.mrna1;Target=FBgn0039623.1 1652 1871 +
Chr2	stalkie_big_nohaplotig	CDS	75523211	75523393	100	+	2	ID=FBgn0039623.1.mrna1.cds6;Name=FBgn0039623.1;Parent=FBgn0039623.1.mrna1;Target=FBgn0039623.1 1872 2054 +
Chr2	stalkie_big_nohaplotig	CDS	75523448	75523676	100	+	2	ID=FBgn0039623.1.mrna1.cds7;Name=FBgn0039623.1;Parent=FBgn0039623.1.mrna1;Target=FBgn0039623.1 2055 2283 +
Chr1	stalkie_big_nohaplotig	mRNA	152750433	152754494	.	+	.	ID=ORF63.mrna1;Name=ORF63;Parent=ORF63.path1;Dir=sensecoverage=100.0;identity=99.8;matches=3293;mismatches=6;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	152750433	152750499	98	+	.	ID=ORF63.mrna1.exon1;Name=ORF63;Parent=ORF63.mrna1;Target=ORF63 1 67 +
Chr1	stalkie_big_nohaplotig	exon	152750555	152750716	100	+	.	ID=ORF63.mrna1.exon2;Name=ORF63;Parent=ORF63.mrna1;Target=ORF63 68 229 +
Chr1	stalkie_big_nohaplotig	exon	152750767	152750854	100	+	.	ID=ORF63.mrna1.exon3;Name=ORF63;Parent=ORF63.mrna1;Target=ORF63 230 317 +
Chr1	stalkie_big_nohaplotig	exon	152750914	152751020	100	+	.	ID=ORF63.mrna1.exon4;Name=ORF63;Parent=ORF63.mrna1;Target=ORF63 318 424 +
Chr1	stalkie_big_nohaplotig	exon	152751079	152751146	100	+	.	ID=ORF63.mrna1.exon5;Name=ORF63;Parent=ORF63.mrna1;Target=ORF63 425 492 +
Chr1	stalkie_big_nohaplotig	exon	152751203	152751335	100	+	.	ID=ORF63.mrna1.exon6;Name=ORF63;Parent=ORF63.mrna1;Target=ORF63 493 625 +
Chr1	stalkie_big_nohaplotig	exon	152751684	152752759	99	+	.	ID=ORF63.mrna1.exon7;Name=ORF63;Parent=ORF63.mrna1;Target=ORF63 626 1701 +
Chr1	stalkie_big_nohaplotig	exon	152752825	152754037	99	+	.	ID=ORF63.mrna1.exon8;Name=ORF63;Parent=ORF63.mrna1;Target=ORF63 1702 2914 +
Chr1	stalkie_big_nohaplotig	exon	152754110	152754494	99	+	.	ID=ORF63.mrna1.exon9;Name=ORF63;Parent=ORF63.mrna1;Target=ORF63 2915 3300 +
Chr1	stalkie_big_nohaplotig	CDS	152750433	152750499	98	+	0	ID=ORF63.mrna1.cds1;Name=ORF63;Parent=ORF63.mrna1;Target=ORF63 1 67 +
Chr1	stalkie_big_nohaplotig	CDS	152750555	152750716	100	+	1	ID=ORF63.mrna1.cds2;Name=ORF63;Parent=ORF63.mrna1;Target=ORF63 68 229 +
Chr1	stalkie_big_nohaplotig	CDS	152750767	152750854	100	+	1	ID=ORF63.mrna1.cds3;Name=ORF63;Parent=ORF63.mrna1;Target=ORF63 230 317 +
Chr1	stalkie_big_nohaplotig	CDS	152750914	152751020	100	+	2	ID=ORF63.mrna1.cds4;Name=ORF63;Parent=ORF63.mrna1;Target=ORF63 318 424 +
Chr1	stalkie_big_nohaplotig	CDS	152751079	152751146	100	+	1	ID=ORF63.mrna1.cds5;Name=ORF63;Parent=ORF63.mrna1;Target=ORF63 425 492 +
Chr1	stalkie_big_nohaplotig	CDS	152751203	152751335	100	+	0	ID=ORF63.mrna1.cds6;Name=ORF63;Parent=ORF63.mrna1;Target=ORF63 493 625 +
Chr1	stalkie_big_nohaplotig	CDS	152751684	152752759	99	+	1	ID=ORF63.mrna1.cds7;Name=ORF63;Parent=ORF63.mrna1;Target=ORF63 626 1701 +
Chr1	stalkie_big_nohaplotig	CDS	152752825	152754037	99	+	0	ID=ORF63.mrna1.cds8;Name=ORF63;Parent=ORF63.mrna1;Target=ORF63 1702 2914 +
Chr1	stalkie_big_nohaplotig	CDS	152754110	152754494	99	+	1	ID=ORF63.mrna1.cds9;Name=ORF63;Parent=ORF63.mrna1;Target=ORF63 2915 3300 +
Chr1	stalkie_big_nohaplotig	mRNA	152742882	152745232	.	+	.	ID=FBgn0002641.1.mrna1;Name=FBgn0002641.1;Parent=FBgn0002641.1.path1;Dir=sensecoverage=94.5;identity=98.6;matches=2211;mismatches=31;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	152742882	152742974	98	+	.	ID=FBgn0002641.1.mrna1.exon1;Name=FBgn0002641.1;Parent=FBgn0002641.1.mrna1;Target=FBgn0002641.1 132 224 +
Chr1	stalkie_big_nohaplotig	exon	152743033	152743581	97	+	.	ID=FBgn0002641.1.mrna1.exon2;Name=FBgn0002641.1;Parent=FBgn0002641.1.mrna1;Target=FBgn0002641.1 225 773 +
Chr1	stalkie_big_nohaplotig	exon	152743633	152745232	98	+	.	ID=FBgn0002641.1.mrna1.exon3;Name=FBgn0002641.1;Parent=FBgn0002641.1.mrna1;Target=FBgn0002641.1 774 2373 +
Chr1	stalkie_big_nohaplotig	CDS	152742883	152742974	98	+	0	ID=FBgn0002641.1.mrna1.cds1;Name=FBgn0002641.1;Parent=FBgn0002641.1.mrna1;Target=FBgn0002641.1 133 224 +
Chr1	stalkie_big_nohaplotig	CDS	152743033	152743581	97	+	2	ID=FBgn0002641.1.mrna1.cds2;Name=FBgn0002641.1;Parent=FBgn0002641.1.mrna1;Target=FBgn0002641.1 225 773 +
Chr1	stalkie_big_nohaplotig	CDS	152743633	152745232	98	+	2	ID=FBgn0002641.1.mrna1.cds3;Name=FBgn0002641.1;Parent=FBgn0002641.1.mrna1;Target=FBgn0002641.1 774 2373 +
Chr1	stalkie_big_nohaplotig	mRNA	152811979	152812943	.	-	.	ID=FBgn0034623.1.mrna1;Name=FBgn0034623.1;Parent=FBgn0034623.1.path1;Dir=sensecoverage=100.0;identity=98.8;matches=809;mismatches=10;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	152812806	152812943	96	-	.	ID=FBgn0034623.1.mrna1.exon1;Name=FBgn0034623.1;Parent=FBgn0034623.1.mrna1;Target=FBgn0034623.1 1 138 +
Chr1	stalkie_big_nohaplotig	exon	152812327	152812727	98	-	.	ID=FBgn0034623.1.mrna1.exon2;Name=FBgn0034623.1;Parent=FBgn0034623.1.mrna1;Target=FBgn0034623.1 139 539 +
Chr1	stalkie_big_nohaplotig	exon	152811979	152812258	100	-	.	ID=FBgn0034623.1.mrna1.exon3;Name=FBgn0034623.1;Parent=FBgn0034623.1.mrna1;Target=FBgn0034623.1 540 819 +
Chr1	stalkie_big_nohaplotig	CDS	152812806	152812943	96	-	0	ID=FBgn0034623.1.mrna1.cds1;Name=FBgn0034623.1;Parent=FBgn0034623.1.mrna1;Target=FBgn0034623.1 1 138 +
Chr1	stalkie_big_nohaplotig	CDS	152812327	152812727	98	-	0	ID=FBgn0034623.1.mrna1.cds2;Name=FBgn0034623.1;Parent=FBgn0034623.1.mrna1;Target=FBgn0034623.1 139 539 +
Chr1	stalkie_big_nohaplotig	CDS	152811979	152812258	100	-	2	ID=FBgn0034623.1.mrna1.cds3;Name=FBgn0034623.1;Parent=FBgn0034623.1.mrna1;Target=FBgn0034623.1 540 819 +
Chr1	stalkie_big_nohaplotig	mRNA	65977871	65984957	.	+	.	ID=FBgn0052476.1.mrna1;Name=FBgn0052476.1;Parent=FBgn0052476.1.path1;Dir=sensecoverage=99.7;identity=100.0;matches=1537;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	65977871	65978017	100	+	.	ID=FBgn0052476.1.mrna1.exon1;Name=FBgn0052476.1;Parent=FBgn0052476.1.mrna1;Target=FBgn0052476.1 6 152 +
Chr1	stalkie_big_nohaplotig	exon	65982101	65982427	100	+	.	ID=FBgn0052476.1.mrna1.exon2;Name=FBgn0052476.1;Parent=FBgn0052476.1.mrna1;Target=FBgn0052476.1 153 479 +
Chr1	stalkie_big_nohaplotig	exon	65982494	65982955	100	+	.	ID=FBgn0052476.1.mrna1.exon3;Name=FBgn0052476.1;Parent=FBgn0052476.1.mrna1;Target=FBgn0052476.1 480 941 +
Chr1	stalkie_big_nohaplotig	exon	65983054	65983217	100	+	.	ID=FBgn0052476.1.mrna1.exon4;Name=FBgn0052476.1;Parent=FBgn0052476.1.mrna1;Target=FBgn0052476.1 942 1105 +
Chr1	stalkie_big_nohaplotig	exon	65984434	65984626	100	+	.	ID=FBgn0052476.1.mrna1.exon5;Name=FBgn0052476.1;Parent=FBgn0052476.1.mrna1;Target=FBgn0052476.1 1106 1298 +
Chr1	stalkie_big_nohaplotig	exon	65984714	65984957	100	+	.	ID=FBgn0052476.1.mrna1.exon6;Name=FBgn0052476.1;Parent=FBgn0052476.1.mrna1;Target=FBgn0052476.1 1299 1542 +
Chr1	stalkie_big_nohaplotig	CDS	65977872	65978017	100	+	0	ID=FBgn0052476.1.mrna1.cds1;Name=FBgn0052476.1;Parent=FBgn0052476.1.mrna1;Target=FBgn0052476.1 7 152 +
Chr1	stalkie_big_nohaplotig	CDS	65982101	65982427	100	+	2	ID=FBgn0052476.1.mrna1.cds2;Name=FBgn0052476.1;Parent=FBgn0052476.1.mrna1;Target=FBgn0052476.1 153 479 +
Chr1	stalkie_big_nohaplotig	CDS	65982494	65982955	100	+	2	ID=FBgn0052476.1.mrna1.cds3;Name=FBgn0052476.1;Parent=FBgn0052476.1.mrna1;Target=FBgn0052476.1 480 941 +
Chr1	stalkie_big_nohaplotig	CDS	65983054	65983217	100	+	2	ID=FBgn0052476.1.mrna1.cds4;Name=FBgn0052476.1;Parent=FBgn0052476.1.mrna1;Target=FBgn0052476.1 942 1105 +
Chr1	stalkie_big_nohaplotig	CDS	65984434	65984626	100	+	1	ID=FBgn0052476.1.mrna1.cds5;Name=FBgn0052476.1;Parent=FBgn0052476.1.mrna1;Target=FBgn0052476.1 1106 1298 +
Chr1	stalkie_big_nohaplotig	CDS	65984714	65984957	100	+	2	ID=FBgn0052476.1.mrna1.cds6;Name=FBgn0052476.1;Parent=FBgn0052476.1.mrna1;Target=FBgn0052476.1 1299 1542 +
Chr1	stalkie_big_nohaplotig	mRNA	57411303	57415546	.	-	.	ID=FBgn0002573.1.mrna1;Name=FBgn0002573.1;Parent=FBgn0002573.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1175;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	57415309	57415546	100	-	.	ID=FBgn0002573.1.mrna1.exon1;Name=FBgn0002573.1;Parent=FBgn0002573.1.mrna1;Target=FBgn0002573.1 1 238 +
Chr1	stalkie_big_nohaplotig	exon	57411303	57412240	99	-	.	ID=FBgn0002573.1.mrna1.exon2;Name=FBgn0002573.1;Parent=FBgn0002573.1.mrna1;Target=FBgn0002573.1 239 1176 +
Chr1	stalkie_big_nohaplotig	CDS	57415309	57415546	100	-	0	ID=FBgn0002573.1.mrna1.cds1;Name=FBgn0002573.1;Parent=FBgn0002573.1.mrna1;Target=FBgn0002573.1 1 238 +
Chr1	stalkie_big_nohaplotig	CDS	57411303	57412240	99	-	1	ID=FBgn0002573.1.mrna1.cds2;Name=FBgn0002573.1;Parent=FBgn0002573.1.mrna1;Target=FBgn0002573.1 239 1176 +
Chr1	stalkie_big_nohaplotig	mRNA	57331627	57334146	.	-	.	ID=FBgn0028695.3.mrna1;Name=FBgn0028695.3;Parent=FBgn0028695.3.path1;Dir=sensecoverage=100.0;identity=99.6;matches=2052;mismatches=9;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	57333100	57334146	99	-	.	ID=FBgn0028695.3.mrna1.exon1;Name=FBgn0028695.3;Parent=FBgn0028695.3.mrna1;Target=FBgn0028695.3 1 1047 +
Chr1	stalkie_big_nohaplotig	exon	57332067	57333033	99	-	.	ID=FBgn0028695.3.mrna1.exon2;Name=FBgn0028695.3;Parent=FBgn0028695.3.mrna1;Target=FBgn0028695.3 1048 2014 +
Chr1	stalkie_big_nohaplotig	exon	57331627	57331673	100	-	.	ID=FBgn0028695.3.mrna1.exon3;Name=FBgn0028695.3;Parent=FBgn0028695.3.mrna1;Target=FBgn0028695.3 2015 2061 +
Chr1	stalkie_big_nohaplotig	CDS	57333100	57334146	99	-	0	ID=FBgn0028695.3.mrna1.cds1;Name=FBgn0028695.3;Parent=FBgn0028695.3.mrna1;Target=FBgn0028695.3 1 1047 +
Chr1	stalkie_big_nohaplotig	CDS	57332067	57333033	99	-	0	ID=FBgn0028695.3.mrna1.cds2;Name=FBgn0028695.3;Parent=FBgn0028695.3.mrna1;Target=FBgn0028695.3 1048 2014 +
Chr1	stalkie_big_nohaplotig	CDS	57331627	57331673	100	-	1	ID=FBgn0028695.3.mrna1.cds3;Name=FBgn0028695.3;Parent=FBgn0028695.3.mrna1;Target=FBgn0028695.3 2015 2061 +
Chr1	stalkie_big_nohaplotig	mRNA	57320174	57321455	.	-	.	ID=FBgn0036546.4.mrna1;Name=FBgn0036546.4;Parent=FBgn0036546.4.path1;Dir=sensecoverage=99.5;identity=99.5;matches=947;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	57321359	57321455	100	-	.	ID=FBgn0036546.4.mrna1.exon1;Name=FBgn0036546.4;Parent=FBgn0036546.4.mrna1;Target=FBgn0036546.4 6 102 +
Chr1	stalkie_big_nohaplotig	exon	57321145	57321287	97	-	.	ID=FBgn0036546.4.mrna1.exon2;Name=FBgn0036546.4;Parent=FBgn0036546.4.mrna1;Target=FBgn0036546.4 103 245 +
Chr1	stalkie_big_nohaplotig	exon	57320587	57321031	99	-	.	ID=FBgn0036546.4.mrna1.exon3;Name=FBgn0036546.4;Parent=FBgn0036546.4.mrna1;Target=FBgn0036546.4 246 690 +
Chr1	stalkie_big_nohaplotig	exon	57320339	57320504	100	-	.	ID=FBgn0036546.4.mrna1.exon4;Name=FBgn0036546.4;Parent=FBgn0036546.4.mrna1;Target=FBgn0036546.4 691 856 +
Chr1	stalkie_big_nohaplotig	exon	57320174	57320274	100	-	.	ID=FBgn0036546.4.mrna1.exon5;Name=FBgn0036546.4;Parent=FBgn0036546.4.mrna1;Target=FBgn0036546.4 857 957 +
Chr1	stalkie_big_nohaplotig	CDS	57321359	57321454	100	-	0	ID=FBgn0036546.4.mrna1.cds1;Name=FBgn0036546.4;Parent=FBgn0036546.4.mrna1;Target=FBgn0036546.4 7 102 +
Chr1	stalkie_big_nohaplotig	CDS	57321145	57321287	97	-	0	ID=FBgn0036546.4.mrna1.cds2;Name=FBgn0036546.4;Parent=FBgn0036546.4.mrna1;Target=FBgn0036546.4 103 245 +
Chr1	stalkie_big_nohaplotig	CDS	57320587	57321031	99	-	2	ID=FBgn0036546.4.mrna1.cds3;Name=FBgn0036546.4;Parent=FBgn0036546.4.mrna1;Target=FBgn0036546.4 246 690 +
Chr1	stalkie_big_nohaplotig	CDS	57320339	57320504	100	-	0	ID=FBgn0036546.4.mrna1.cds4;Name=FBgn0036546.4;Parent=FBgn0036546.4.mrna1;Target=FBgn0036546.4 691 856 +
Chr1	stalkie_big_nohaplotig	CDS	57320174	57320274	100	-	1	ID=FBgn0036546.4.mrna1.cds5;Name=FBgn0036546.4;Parent=FBgn0036546.4.mrna1;Target=FBgn0036546.4 857 957 +
Chr1	stalkie_big_nohaplotig	mRNA	57349577	57359370	.	+	.	ID=FBgn0037090.mrna1;Name=FBgn0037090;Parent=FBgn0037090.path1;Dir=sensecoverage=100.0;identity=99.3;matches=834;mismatches=6;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	57349577	57349828	100	+	.	ID=FBgn0037090.mrna1.exon1;Name=FBgn0037090;Parent=FBgn0037090.mrna1;Target=FBgn0037090 1 252 +
Chr1	stalkie_big_nohaplotig	exon	57358717	57358869	100	+	.	ID=FBgn0037090.mrna1.exon2;Name=FBgn0037090;Parent=FBgn0037090.mrna1;Target=FBgn0037090 253 405 +
Chr1	stalkie_big_nohaplotig	exon	57358936	57359370	98	+	.	ID=FBgn0037090.mrna1.exon3;Name=FBgn0037090;Parent=FBgn0037090.mrna1;Target=FBgn0037090 406 840 +
Chr1	stalkie_big_nohaplotig	CDS	57349577	57349828	100	+	0	ID=FBgn0037090.mrna1.cds1;Name=FBgn0037090;Parent=FBgn0037090.mrna1;Target=FBgn0037090 1 252 +
Chr1	stalkie_big_nohaplotig	CDS	57358717	57358869	100	+	0	ID=FBgn0037090.mrna1.cds2;Name=FBgn0037090;Parent=FBgn0037090.mrna1;Target=FBgn0037090 253 405 +
Chr1	stalkie_big_nohaplotig	CDS	57358936	57359370	98	+	0	ID=FBgn0037090.mrna1.cds3;Name=FBgn0037090;Parent=FBgn0037090.mrna1;Target=FBgn0037090 406 840 +
Chr1	stalkie_big_nohaplotig	mRNA	57349577	57360234	.	+	.	ID=FBgn0037090.1.mrna1;Name=FBgn0037090.1;Parent=FBgn0037090.1.path1;Dir=sensecoverage=100.0;identity=99.2;matches=1479;mismatches=11;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	57349577	57349828	100	+	.	ID=FBgn0037090.1.mrna1.exon1;Name=FBgn0037090.1;Parent=FBgn0037090.1.mrna1;Target=FBgn0037090.1 1 252 +
Chr1	stalkie_big_nohaplotig	exon	57358717	57358869	100	+	.	ID=FBgn0037090.1.mrna1.exon2;Name=FBgn0037090.1;Parent=FBgn0037090.1.mrna1;Target=FBgn0037090.1 253 405 +
Chr1	stalkie_big_nohaplotig	exon	57358936	57359448	99	+	.	ID=FBgn0037090.1.mrna1.exon3;Name=FBgn0037090.1;Parent=FBgn0037090.1.mrna1;Target=FBgn0037090.1 406 918 +
Chr1	stalkie_big_nohaplotig	exon	57359516	57359651	98	+	.	ID=FBgn0037090.1.mrna1.exon4;Name=FBgn0037090.1;Parent=FBgn0037090.1.mrna1;Target=FBgn0037090.1 919 1054 +
Chr1	stalkie_big_nohaplotig	exon	57359736	57359926	97	+	.	ID=FBgn0037090.1.mrna1.exon5;Name=FBgn0037090.1;Parent=FBgn0037090.1.mrna1;Target=FBgn0037090.1 1055 1245 +
Chr1	stalkie_big_nohaplotig	exon	57359990	57360234	98	+	.	ID=FBgn0037090.1.mrna1.exon6;Name=FBgn0037090.1;Parent=FBgn0037090.1.mrna1;Target=FBgn0037090.1 1246 1491 +
Chr1	stalkie_big_nohaplotig	CDS	57349577	57349828	100	+	0	ID=FBgn0037090.1.mrna1.cds1;Name=FBgn0037090.1;Parent=FBgn0037090.1.mrna1;Target=FBgn0037090.1 1 252 +
Chr1	stalkie_big_nohaplotig	CDS	57358717	57358869	100	+	0	ID=FBgn0037090.1.mrna1.cds2;Name=FBgn0037090.1;Parent=FBgn0037090.1.mrna1;Target=FBgn0037090.1 253 405 +
Chr1	stalkie_big_nohaplotig	CDS	57358936	57359448	99	+	0	ID=FBgn0037090.1.mrna1.cds3;Name=FBgn0037090.1;Parent=FBgn0037090.1.mrna1;Target=FBgn0037090.1 406 918 +
Chr1	stalkie_big_nohaplotig	CDS	57359516	57359651	98	+	0	ID=FBgn0037090.1.mrna1.cds4;Name=FBgn0037090.1;Parent=FBgn0037090.1.mrna1;Target=FBgn0037090.1 919 1054 +
Chr1	stalkie_big_nohaplotig	CDS	57359736	57359926	97	+	1	ID=FBgn0037090.1.mrna1.cds5;Name=FBgn0037090.1;Parent=FBgn0037090.1.mrna1;Target=FBgn0037090.1 1055 1245 +
Chr1	stalkie_big_nohaplotig	CDS	57359990	57360234	98	+	0	ID=FBgn0037090.1.mrna1.cds6;Name=FBgn0037090.1;Parent=FBgn0037090.1.mrna1;Target=FBgn0037090.1 1246 1491 +
Chr1	stalkie_big_nohaplotig	mRNA	141337940	141340861	.	+	.	ID=FBgn0030742.1.mrna1;Name=FBgn0030742.1;Parent=FBgn0030742.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=998;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	141337940	141337954	100	+	.	ID=FBgn0030742.1.mrna1.exon1;Name=FBgn0030742.1;Parent=FBgn0030742.1.mrna1;Target=FBgn0030742.1 1 15 +
Chr1	stalkie_big_nohaplotig	exon	141338278	141338612	100	+	.	ID=FBgn0030742.1.mrna1.exon2;Name=FBgn0030742.1;Parent=FBgn0030742.1.mrna1;Target=FBgn0030742.1 16 350 +
Chr1	stalkie_big_nohaplotig	exon	141338686	141339022	99	+	.	ID=FBgn0030742.1.mrna1.exon3;Name=FBgn0030742.1;Parent=FBgn0030742.1.mrna1;Target=FBgn0030742.1 351 687 +
Chr1	stalkie_big_nohaplotig	exon	141340550	141340861	100	+	.	ID=FBgn0030742.1.mrna1.exon4;Name=FBgn0030742.1;Parent=FBgn0030742.1.mrna1;Target=FBgn0030742.1 688 999 +
Chr1	stalkie_big_nohaplotig	CDS	141337940	141337954	100	+	0	ID=FBgn0030742.1.mrna1.cds1;Name=FBgn0030742.1;Parent=FBgn0030742.1.mrna1;Target=FBgn0030742.1 1 15 +
Chr1	stalkie_big_nohaplotig	CDS	141338278	141338612	100	+	0	ID=FBgn0030742.1.mrna1.cds2;Name=FBgn0030742.1;Parent=FBgn0030742.1.mrna1;Target=FBgn0030742.1 16 350 +
Chr1	stalkie_big_nohaplotig	CDS	141338686	141339022	99	+	2	ID=FBgn0030742.1.mrna1.cds3;Name=FBgn0030742.1;Parent=FBgn0030742.1.mrna1;Target=FBgn0030742.1 351 687 +
Chr1	stalkie_big_nohaplotig	CDS	141340550	141340861	100	+	0	ID=FBgn0030742.1.mrna1.cds4;Name=FBgn0030742.1;Parent=FBgn0030742.1.mrna1;Target=FBgn0030742.1 688 999 +
Chr1	stalkie_big_nohaplotig	mRNA	141424887	141427190	.	-	.	ID=FBgn0029970.1.mrna1;Name=FBgn0029970.1;Parent=FBgn0029970.1.path1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=2281;mismatches=23;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	141424887	141427190	99	-	.	ID=FBgn0029970.1.mrna1.exon1;Name=FBgn0029970.1;Parent=FBgn0029970.1.mrna1;Target=FBgn0029970.1 2304 1 .
Chr1	stalkie_big_nohaplotig	CDS	141424887	141427190	99	-	0	ID=FBgn0029970.1.mrna1.cds1;Name=FBgn0029970.1;Parent=FBgn0029970.1.mrna1;Target=FBgn0029970.1 2304 1 .
Chr1	stalkie_big_nohaplotig	mRNA	141424233	141424643	.	+	.	ID=FBgn0040929.1.mrna1;Name=FBgn0040929.1;Parent=FBgn0040929.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=341;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	141424233	141424380	100	+	.	ID=FBgn0040929.1.mrna1.exon1;Name=FBgn0040929.1;Parent=FBgn0040929.1.mrna1;Target=FBgn0040929.1 1 148 +
Chr1	stalkie_big_nohaplotig	exon	141424450	141424643	99	+	.	ID=FBgn0040929.1.mrna1.exon2;Name=FBgn0040929.1;Parent=FBgn0040929.1.mrna1;Target=FBgn0040929.1 149 342 +
Chr1	stalkie_big_nohaplotig	CDS	141424233	141424380	100	+	0	ID=FBgn0040929.1.mrna1.cds1;Name=FBgn0040929.1;Parent=FBgn0040929.1.mrna1;Target=FBgn0040929.1 1 148 +
Chr1	stalkie_big_nohaplotig	CDS	141424450	141424643	99	+	1	ID=FBgn0040929.1.mrna1.cds2;Name=FBgn0040929.1;Parent=FBgn0040929.1.mrna1;Target=FBgn0040929.1 149 342 +
Chr1	stalkie_big_nohaplotig	mRNA	16044282	16045067	.	-	.	ID=FBgn0005694.mrna1;Name=FBgn0005694;Parent=FBgn0005694.path1;Dir=sensecoverage=100.0;identity=99.9;matches=710;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	16044491	16045067	99	-	.	ID=FBgn0005694.mrna1.exon1;Name=FBgn0005694;Parent=FBgn0005694.mrna1;Target=FBgn0005694 1 577 +
Chr1	stalkie_big_nohaplotig	exon	16044282	16044415	100	-	.	ID=FBgn0005694.mrna1.exon2;Name=FBgn0005694;Parent=FBgn0005694.mrna1;Target=FBgn0005694 578 711 +
Chr1	stalkie_big_nohaplotig	CDS	16044491	16045067	99	-	0	ID=FBgn0005694.mrna1.cds1;Name=FBgn0005694;Parent=FBgn0005694.mrna1;Target=FBgn0005694 1 577 +
Chr1	stalkie_big_nohaplotig	CDS	16044282	16044415	100	-	1	ID=FBgn0005694.mrna1.cds2;Name=FBgn0005694;Parent=FBgn0005694.mrna1;Target=FBgn0005694 578 711 +
Chr1	stalkie_big_nohaplotig	mRNA	16081056	16087051	.	-	.	ID=FBgn0261258.1.mrna1;Name=FBgn0261258.1;Parent=FBgn0261258.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2389;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	16086985	16087051	100	-	.	ID=FBgn0261258.1.mrna1.exon1;Name=FBgn0261258.1;Parent=FBgn0261258.1.mrna1;Target=FBgn0261258.1 1 67 +
Chr1	stalkie_big_nohaplotig	exon	16086506	16086823	100	-	.	ID=FBgn0261258.1.mrna1.exon2;Name=FBgn0261258.1;Parent=FBgn0261258.1.mrna1;Target=FBgn0261258.1 68 385 +
Chr1	stalkie_big_nohaplotig	exon	16086309	16086432	100	-	.	ID=FBgn0261258.1.mrna1.exon3;Name=FBgn0261258.1;Parent=FBgn0261258.1.mrna1;Target=FBgn0261258.1 386 509 +
Chr1	stalkie_big_nohaplotig	exon	16085073	16085129	100	-	.	ID=FBgn0261258.1.mrna1.exon4;Name=FBgn0261258.1;Parent=FBgn0261258.1.mrna1;Target=FBgn0261258.1 510 566 +
Chr1	stalkie_big_nohaplotig	exon	16084336	16084512	98	-	.	ID=FBgn0261258.1.mrna1.exon5;Name=FBgn0261258.1;Parent=FBgn0261258.1.mrna1;Target=FBgn0261258.1 567 743 +
Chr1	stalkie_big_nohaplotig	exon	16081056	16082706	99	-	.	ID=FBgn0261258.1.mrna1.exon6;Name=FBgn0261258.1;Parent=FBgn0261258.1.mrna1;Target=FBgn0261258.1 744 2394 +
Chr1	stalkie_big_nohaplotig	CDS	16086985	16087051	100	-	0	ID=FBgn0261258.1.mrna1.cds1;Name=FBgn0261258.1;Parent=FBgn0261258.1.mrna1;Target=FBgn0261258.1 1 67 +
Chr1	stalkie_big_nohaplotig	CDS	16086506	16086823	100	-	1	ID=FBgn0261258.1.mrna1.cds2;Name=FBgn0261258.1;Parent=FBgn0261258.1.mrna1;Target=FBgn0261258.1 68 385 +
Chr1	stalkie_big_nohaplotig	CDS	16086309	16086432	100	-	1	ID=FBgn0261258.1.mrna1.cds3;Name=FBgn0261258.1;Parent=FBgn0261258.1.mrna1;Target=FBgn0261258.1 386 509 +
Chr1	stalkie_big_nohaplotig	CDS	16085073	16085129	100	-	2	ID=FBgn0261258.1.mrna1.cds4;Name=FBgn0261258.1;Parent=FBgn0261258.1.mrna1;Target=FBgn0261258.1 510 566 +
Chr1	stalkie_big_nohaplotig	CDS	16084336	16084512	98	-	2	ID=FBgn0261258.1.mrna1.cds5;Name=FBgn0261258.1;Parent=FBgn0261258.1.mrna1;Target=FBgn0261258.1 567 743 +
Chr1	stalkie_big_nohaplotig	CDS	16081056	16082706	99	-	2	ID=FBgn0261258.1.mrna1.cds6;Name=FBgn0261258.1;Parent=FBgn0261258.1.mrna1;Target=FBgn0261258.1 744 2394 +
Chr2	stalkie_big_nohaplotig	mRNA	154424774	154427335	.	-	.	ID=FBgn0039709.mrna2;Name=FBgn0039709;Parent=FBgn0039709.path2;Dir=sensecoverage=86.6;identity=99.3;matches=2478;mismatches=16;indels=1;unknowns=1
Chr2	stalkie_big_nohaplotig	exon	154425356	154427335	99	-	.	ID=FBgn0039709.mrna2.exon1;Name=FBgn0039709;Parent=FBgn0039709.mrna2;Target=FBgn0039709 388 2367 +
Chr2	stalkie_big_nohaplotig	exon	154424774	154425288	99	-	.	ID=FBgn0039709.mrna2.exon2;Name=FBgn0039709;Parent=FBgn0039709.mrna2;Target=FBgn0039709 2368 2883 +
Chr2	stalkie_big_nohaplotig	CDS	154425356	154427335	99	-	0	ID=FBgn0039709.mrna2.cds1;Name=FBgn0039709;Parent=FBgn0039709.mrna2;Target=FBgn0039709 388 2367 +
Chr2	stalkie_big_nohaplotig	CDS	154424774	154425288	99	-	0	ID=FBgn0039709.mrna2.cds2;Name=FBgn0039709;Parent=FBgn0039709.mrna2;Target=FBgn0039709 2368 2883 +
Chr2	stalkie_big_nohaplotig	mRNA	101030699	101040699	.	+	.	ID=FBgn0063649.1.mrna1;Name=FBgn0063649.1;Parent=FBgn0063649.1.path1;Dir=sensecoverage=92.3;identity=100.0;matches=1900;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	101030699	101031186	100	+	.	ID=FBgn0063649.1.mrna1.exon1;Name=FBgn0063649.1;Parent=FBgn0063649.1.mrna1;Target=FBgn0063649.1 155 642 +
Chr2	stalkie_big_nohaplotig	exon	101031251	101031400	100	+	.	ID=FBgn0063649.1.mrna1.exon2;Name=FBgn0063649.1;Parent=FBgn0063649.1.mrna1;Target=FBgn0063649.1 643 792 +
Chr2	stalkie_big_nohaplotig	exon	101031560	101031803	100	+	.	ID=FBgn0063649.1.mrna1.exon3;Name=FBgn0063649.1;Parent=FBgn0063649.1.mrna1;Target=FBgn0063649.1 793 1036 +
Chr2	stalkie_big_nohaplotig	exon	101032937	101033204	100	+	.	ID=FBgn0063649.1.mrna1.exon4;Name=FBgn0063649.1;Parent=FBgn0063649.1.mrna1;Target=FBgn0063649.1 1037 1304 +
Chr2	stalkie_big_nohaplotig	exon	101034589	101034886	100	+	.	ID=FBgn0063649.1.mrna1.exon5;Name=FBgn0063649.1;Parent=FBgn0063649.1.mrna1;Target=FBgn0063649.1 1305 1602 +
Chr2	stalkie_big_nohaplotig	exon	101039959	101040139	100	+	.	ID=FBgn0063649.1.mrna1.exon6;Name=FBgn0063649.1;Parent=FBgn0063649.1.mrna1;Target=FBgn0063649.1 1603 1783 +
Chr2	stalkie_big_nohaplotig	exon	101040238	101040383	100	+	.	ID=FBgn0063649.1.mrna1.exon7;Name=FBgn0063649.1;Parent=FBgn0063649.1.mrna1;Target=FBgn0063649.1 1784 1929 +
Chr2	stalkie_big_nohaplotig	exon	101040575	101040699	100	+	.	ID=FBgn0063649.1.mrna1.exon8;Name=FBgn0063649.1;Parent=FBgn0063649.1.mrna1;Target=FBgn0063649.1 1930 2054 +
Chr2	stalkie_big_nohaplotig	CDS	101030701	101031186	100	+	0	ID=FBgn0063649.1.mrna1.cds1;Name=FBgn0063649.1;Parent=FBgn0063649.1.mrna1;Target=FBgn0063649.1 157 642 +
Chr2	stalkie_big_nohaplotig	CDS	101031251	101031400	100	+	0	ID=FBgn0063649.1.mrna1.cds2;Name=FBgn0063649.1;Parent=FBgn0063649.1.mrna1;Target=FBgn0063649.1 643 792 +
Chr2	stalkie_big_nohaplotig	CDS	101031560	101031803	100	+	0	ID=FBgn0063649.1.mrna1.cds3;Name=FBgn0063649.1;Parent=FBgn0063649.1.mrna1;Target=FBgn0063649.1 793 1036 +
Chr2	stalkie_big_nohaplotig	CDS	101032937	101033204	100	+	1	ID=FBgn0063649.1.mrna1.cds4;Name=FBgn0063649.1;Parent=FBgn0063649.1.mrna1;Target=FBgn0063649.1 1037 1304 +
Chr2	stalkie_big_nohaplotig	CDS	101034589	101034886	100	+	2	ID=FBgn0063649.1.mrna1.cds5;Name=FBgn0063649.1;Parent=FBgn0063649.1.mrna1;Target=FBgn0063649.1 1305 1602 +
Chr2	stalkie_big_nohaplotig	CDS	101039959	101040139	100	+	0	ID=FBgn0063649.1.mrna1.cds6;Name=FBgn0063649.1;Parent=FBgn0063649.1.mrna1;Target=FBgn0063649.1 1603 1783 +
Chr2	stalkie_big_nohaplotig	CDS	101040238	101040383	100	+	1	ID=FBgn0063649.1.mrna1.cds7;Name=FBgn0063649.1;Parent=FBgn0063649.1.mrna1;Target=FBgn0063649.1 1784 1929 +
Chr2	stalkie_big_nohaplotig	CDS	101040575	101040697	100	+	0	ID=FBgn0063649.1.mrna1.cds8;Name=FBgn0063649.1;Parent=FBgn0063649.1.mrna1;Target=FBgn0063649.1 1930 2052 +
Chr2	stalkie_big_nohaplotig	mRNA	101145128	101145973	.	+	.	ID=FBgn0086370.1.mrna1;Name=FBgn0086370.1;Parent=FBgn0086370.1.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=846;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	101145128	101145973	100	+	.	ID=FBgn0086370.1.mrna1.exon1;Name=FBgn0086370.1;Parent=FBgn0086370.1.mrna1;Target=FBgn0086370.1 846 1 .
Chr2	stalkie_big_nohaplotig	CDS	101145128	101145973	100	+	0	ID=FBgn0086370.1.mrna1.cds1;Name=FBgn0086370.1;Parent=FBgn0086370.1.mrna1;Target=FBgn0086370.1 846 1 .
ChrX	stalkie_big_nohaplotig	mRNA	2505801	2507855	.	-	.	ID=FBgn0040298.1.mrna1;Name=FBgn0040298.1;Parent=FBgn0040298.1.path1;Dir=sensecoverage=99.5;identity=99.1;matches=1502;mismatches=11;indels=3;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	2507723	2507855	100	-	.	ID=FBgn0040298.1.mrna1.exon1;Name=FBgn0040298.1;Parent=FBgn0040298.1.mrna1;Target=FBgn0040298.1 9 141 +
ChrX	stalkie_big_nohaplotig	exon	2507006	2507635	98	-	.	ID=FBgn0040298.1.mrna1.exon2;Name=FBgn0040298.1;Parent=FBgn0040298.1.mrna1;Target=FBgn0040298.1 142 771 +
ChrX	stalkie_big_nohaplotig	exon	2506753	2506951	99	-	.	ID=FBgn0040298.1.mrna1.exon3;Name=FBgn0040298.1;Parent=FBgn0040298.1.mrna1;Target=FBgn0040298.1 772 970 +
ChrX	stalkie_big_nohaplotig	exon	2506547	2506698	100	-	.	ID=FBgn0040298.1.mrna1.exon4;Name=FBgn0040298.1;Parent=FBgn0040298.1.mrna1;Target=FBgn0040298.1 971 1122 +
ChrX	stalkie_big_nohaplotig	exon	2506184	2506485	98	-	.	ID=FBgn0040298.1.mrna1.exon5;Name=FBgn0040298.1;Parent=FBgn0040298.1.mrna1;Target=FBgn0040298.1 1123 1427 +
ChrX	stalkie_big_nohaplotig	exon	2505801	2505897	97	-	.	ID=FBgn0040298.1.mrna1.exon6;Name=FBgn0040298.1;Parent=FBgn0040298.1.mrna1;Target=FBgn0040298.1 1428 1524 +
ChrX	stalkie_big_nohaplotig	CDS	2507723	2507854	100	-	0	ID=FBgn0040298.1.mrna1.cds1;Name=FBgn0040298.1;Parent=FBgn0040298.1.mrna1;Target=FBgn0040298.1 10 141 +
ChrX	stalkie_big_nohaplotig	CDS	2507006	2507635	98	-	0	ID=FBgn0040298.1.mrna1.cds2;Name=FBgn0040298.1;Parent=FBgn0040298.1.mrna1;Target=FBgn0040298.1 142 771 +
ChrX	stalkie_big_nohaplotig	CDS	2506753	2506951	99	-	0	ID=FBgn0040298.1.mrna1.cds3;Name=FBgn0040298.1;Parent=FBgn0040298.1.mrna1;Target=FBgn0040298.1 772 970 +
ChrX	stalkie_big_nohaplotig	CDS	2506547	2506698	100	-	1	ID=FBgn0040298.1.mrna1.cds4;Name=FBgn0040298.1;Parent=FBgn0040298.1.mrna1;Target=FBgn0040298.1 971 1122 +
ChrX	stalkie_big_nohaplotig	CDS	2506184	2506485	98	-	0	ID=FBgn0040298.1.mrna1.cds5;Name=FBgn0040298.1;Parent=FBgn0040298.1.mrna1;Target=FBgn0040298.1 1123 1427 +
ChrX	stalkie_big_nohaplotig	CDS	2505801	2505897	97	-	2	ID=FBgn0040298.1.mrna1.cds6;Name=FBgn0040298.1;Parent=FBgn0040298.1.mrna1;Target=FBgn0040298.1 1428 1524 +
ChrX	stalkie_big_nohaplotig	mRNA	2958115	2963919	.	+	.	ID=FBgn0015391.1.mrna1;Name=FBgn0015391.1;Parent=FBgn0015391.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3695;mismatches=0;indels=1;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	2958115	2958434	99	+	.	ID=FBgn0015391.1.mrna1.exon1;Name=FBgn0015391.1;Parent=FBgn0015391.1.mrna1;Target=FBgn0015391.1 1 321 +
ChrX	stalkie_big_nohaplotig	exon	2958507	2958940	100	+	.	ID=FBgn0015391.1.mrna1.exon2;Name=FBgn0015391.1;Parent=FBgn0015391.1.mrna1;Target=FBgn0015391.1 322 755 +
ChrX	stalkie_big_nohaplotig	exon	2960068	2960692	100	+	.	ID=FBgn0015391.1.mrna1.exon3;Name=FBgn0015391.1;Parent=FBgn0015391.1.mrna1;Target=FBgn0015391.1 756 1380 +
ChrX	stalkie_big_nohaplotig	exon	2960760	2960870	100	+	.	ID=FBgn0015391.1.mrna1.exon4;Name=FBgn0015391.1;Parent=FBgn0015391.1.mrna1;Target=FBgn0015391.1 1381 1491 +
ChrX	stalkie_big_nohaplotig	exon	2960924	2961123	100	+	.	ID=FBgn0015391.1.mrna1.exon5;Name=FBgn0015391.1;Parent=FBgn0015391.1.mrna1;Target=FBgn0015391.1 1492 1691 +
ChrX	stalkie_big_nohaplotig	exon	2961175	2962855	100	+	.	ID=FBgn0015391.1.mrna1.exon6;Name=FBgn0015391.1;Parent=FBgn0015391.1.mrna1;Target=FBgn0015391.1 1692 3372 +
ChrX	stalkie_big_nohaplotig	exon	2963596	2963919	100	+	.	ID=FBgn0015391.1.mrna1.exon7;Name=FBgn0015391.1;Parent=FBgn0015391.1.mrna1;Target=FBgn0015391.1 3373 3696 +
ChrX	stalkie_big_nohaplotig	CDS	2958117	2958262	99	+	0	ID=FBgn0015391.1.mrna1.cds1;Name=FBgn0015391.1;Parent=FBgn0015391.1.mrna1;Target=FBgn0015391.1 3 149 +
ChrX	stalkie_big_nohaplotig	mRNA	2972429	2974897	.	-	.	ID=FBgn0041184.1.mrna1;Name=FBgn0041184.1;Parent=FBgn0041184.1.path1;Dir=sensecoverage=99.8;identity=100.0;matches=1973;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	2974085	2974897	100	-	.	ID=FBgn0041184.1.mrna1.exon1;Name=FBgn0041184.1;Parent=FBgn0041184.1.mrna1;Target=FBgn0041184.1 5 817 +
ChrX	stalkie_big_nohaplotig	exon	2973148	2974012	100	-	.	ID=FBgn0041184.1.mrna1.exon2;Name=FBgn0041184.1;Parent=FBgn0041184.1.mrna1;Target=FBgn0041184.1 818 1682 +
ChrX	stalkie_big_nohaplotig	exon	2972429	2972723	100	-	.	ID=FBgn0041184.1.mrna1.exon3;Name=FBgn0041184.1;Parent=FBgn0041184.1.mrna1;Target=FBgn0041184.1 1683 1977 +
ChrX	stalkie_big_nohaplotig	CDS	2974085	2974895	100	-	0	ID=FBgn0041184.1.mrna1.cds1;Name=FBgn0041184.1;Parent=FBgn0041184.1.mrna1;Target=FBgn0041184.1 7 817 +
ChrX	stalkie_big_nohaplotig	CDS	2973148	2974012	100	-	1	ID=FBgn0041184.1.mrna1.cds2;Name=FBgn0041184.1;Parent=FBgn0041184.1.mrna1;Target=FBgn0041184.1 818 1682 +
ChrX	stalkie_big_nohaplotig	CDS	2972429	2972723	100	-	2	ID=FBgn0041184.1.mrna1.cds3;Name=FBgn0041184.1;Parent=FBgn0041184.1.mrna1;Target=FBgn0041184.1 1683 1977 +
ChrX	stalkie_big_nohaplotig	mRNA	2485892	2490795	.	-	.	ID=FBgn0015245.4.mrna1;Name=FBgn0015245.4;Parent=FBgn0015245.4.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1729;mismatches=2;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	2490781	2490795	93	-	.	ID=FBgn0015245.4.mrna1.exon1;Name=FBgn0015245.4;Parent=FBgn0015245.4.mrna1;Target=FBgn0015245.4 1 15 +
ChrX	stalkie_big_nohaplotig	exon	2490594	2490626	100	-	.	ID=FBgn0015245.4.mrna1.exon2;Name=FBgn0015245.4;Parent=FBgn0015245.4.mrna1;Target=FBgn0015245.4 16 48 +
ChrX	stalkie_big_nohaplotig	exon	2486334	2487704	100	-	.	ID=FBgn0015245.4.mrna1.exon3;Name=FBgn0015245.4;Parent=FBgn0015245.4.mrna1;Target=FBgn0015245.4 49 1419 +
ChrX	stalkie_big_nohaplotig	exon	2486073	2486258	100	-	.	ID=FBgn0015245.4.mrna1.exon4;Name=FBgn0015245.4;Parent=FBgn0015245.4.mrna1;Target=FBgn0015245.4 1420 1605 +
ChrX	stalkie_big_nohaplotig	exon	2485892	2486017	99	-	.	ID=FBgn0015245.4.mrna1.exon5;Name=FBgn0015245.4;Parent=FBgn0015245.4.mrna1;Target=FBgn0015245.4 1606 1731 +
ChrX	stalkie_big_nohaplotig	CDS	2490781	2490795	93	-	0	ID=FBgn0015245.4.mrna1.cds1;Name=FBgn0015245.4;Parent=FBgn0015245.4.mrna1;Target=FBgn0015245.4 1 15 +
ChrX	stalkie_big_nohaplotig	CDS	2490594	2490626	100	-	0	ID=FBgn0015245.4.mrna1.cds2;Name=FBgn0015245.4;Parent=FBgn0015245.4.mrna1;Target=FBgn0015245.4 16 48 +
ChrX	stalkie_big_nohaplotig	CDS	2486334	2487704	100	-	0	ID=FBgn0015245.4.mrna1.cds3;Name=FBgn0015245.4;Parent=FBgn0015245.4.mrna1;Target=FBgn0015245.4 49 1419 +
ChrX	stalkie_big_nohaplotig	CDS	2486073	2486258	100	-	0	ID=FBgn0015245.4.mrna1.cds4;Name=FBgn0015245.4;Parent=FBgn0015245.4.mrna1;Target=FBgn0015245.4 1420 1605 +
ChrX	stalkie_big_nohaplotig	CDS	2485892	2486017	99	-	0	ID=FBgn0015245.4.mrna1.cds5;Name=FBgn0015245.4;Parent=FBgn0015245.4.mrna1;Target=FBgn0015245.4 1606 1731 +
ChrX	stalkie_big_nohaplotig	mRNA	13119863	13121096	.	-	.	ID=FBgn0032407.1.mrna1;Name=FBgn0032407.1;Parent=FBgn0032407.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=867;mismatches=3;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	13121015	13121096	98	-	.	ID=FBgn0032407.1.mrna1.exon1;Name=FBgn0032407.1;Parent=FBgn0032407.1.mrna1;Target=FBgn0032407.1 1 82 +
ChrX	stalkie_big_nohaplotig	exon	13120806	13120902	98	-	.	ID=FBgn0032407.1.mrna1.exon2;Name=FBgn0032407.1;Parent=FBgn0032407.1.mrna1;Target=FBgn0032407.1 83 179 +
ChrX	stalkie_big_nohaplotig	exon	13120546	13120744	100	-	.	ID=FBgn0032407.1.mrna1.exon3;Name=FBgn0032407.1;Parent=FBgn0032407.1.mrna1;Target=FBgn0032407.1 180 378 +
ChrX	stalkie_big_nohaplotig	exon	13120410	13120487	100	-	.	ID=FBgn0032407.1.mrna1.exon4;Name=FBgn0032407.1;Parent=FBgn0032407.1.mrna1;Target=FBgn0032407.1 379 456 +
ChrX	stalkie_big_nohaplotig	exon	13120180	13120343	99	-	.	ID=FBgn0032407.1.mrna1.exon5;Name=FBgn0032407.1;Parent=FBgn0032407.1.mrna1;Target=FBgn0032407.1 457 620 +
ChrX	stalkie_big_nohaplotig	exon	13119863	13120112	100	-	.	ID=FBgn0032407.1.mrna1.exon6;Name=FBgn0032407.1;Parent=FBgn0032407.1.mrna1;Target=FBgn0032407.1 621 870 +
ChrX	stalkie_big_nohaplotig	CDS	13121015	13121096	98	-	0	ID=FBgn0032407.1.mrna1.cds1;Name=FBgn0032407.1;Parent=FBgn0032407.1.mrna1;Target=FBgn0032407.1 1 82 +
ChrX	stalkie_big_nohaplotig	CDS	13120806	13120902	98	-	1	ID=FBgn0032407.1.mrna1.cds2;Name=FBgn0032407.1;Parent=FBgn0032407.1.mrna1;Target=FBgn0032407.1 83 179 +
ChrX	stalkie_big_nohaplotig	CDS	13120546	13120744	100	-	2	ID=FBgn0032407.1.mrna1.cds3;Name=FBgn0032407.1;Parent=FBgn0032407.1.mrna1;Target=FBgn0032407.1 180 378 +
ChrX	stalkie_big_nohaplotig	CDS	13120410	13120487	100	-	0	ID=FBgn0032407.1.mrna1.cds4;Name=FBgn0032407.1;Parent=FBgn0032407.1.mrna1;Target=FBgn0032407.1 379 456 +
ChrX	stalkie_big_nohaplotig	CDS	13120180	13120343	99	-	0	ID=FBgn0032407.1.mrna1.cds5;Name=FBgn0032407.1;Parent=FBgn0032407.1.mrna1;Target=FBgn0032407.1 457 620 +
ChrX	stalkie_big_nohaplotig	CDS	13119863	13120112	100	-	2	ID=FBgn0032407.1.mrna1.cds6;Name=FBgn0032407.1;Parent=FBgn0032407.1.mrna1;Target=FBgn0032407.1 621 870 +
ChrX	stalkie_big_nohaplotig	mRNA	14006812	14010704	.	-	.	ID=FBgn0001301.1.mrna1;Name=FBgn0001301.1;Parent=FBgn0001301.1.path1;Dir=sensecoverage=65.1;identity=99.4;matches=2202;mismatches=2;indels=12;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	14010441	14010704	100	-	.	ID=FBgn0001301.1.mrna1.exon1;Name=FBgn0001301.1;Parent=FBgn0001301.1.mrna1;Target=FBgn0001301.1 1184 1447 +
ChrX	stalkie_big_nohaplotig	exon	14009259	14009852	97	-	.	ID=FBgn0001301.1.mrna1.exon2;Name=FBgn0001301.1;Parent=FBgn0001301.1.mrna1;Target=FBgn0001301.1 1448 2029 +
ChrX	stalkie_big_nohaplotig	exon	14008820	14009196	99	-	.	ID=FBgn0001301.1.mrna1.exon3;Name=FBgn0001301.1;Parent=FBgn0001301.1.mrna1;Target=FBgn0001301.1 2030 2406 +
ChrX	stalkie_big_nohaplotig	exon	14006812	14007792	99	-	.	ID=FBgn0001301.1.mrna1.exon4;Name=FBgn0001301.1;Parent=FBgn0001301.1.mrna1;Target=FBgn0001301.1 2407 3387 +
ChrX	stalkie_big_nohaplotig	CDS	14010441	14010702	100	-	0	ID=FBgn0001301.1.mrna1.cds1;Name=FBgn0001301.1;Parent=FBgn0001301.1.mrna1;Target=FBgn0001301.1 1186 1447 +
ChrX	stalkie_big_nohaplotig	CDS	14009259	14009852	97	-	1	ID=FBgn0001301.1.mrna1.cds2;Name=FBgn0001301.1;Parent=FBgn0001301.1.mrna1;Target=FBgn0001301.1 1448 2029 +
ChrX	stalkie_big_nohaplotig	CDS	14008820	14009196	99	-	1	ID=FBgn0001301.1.mrna1.cds3;Name=FBgn0001301.1;Parent=FBgn0001301.1.mrna1;Target=FBgn0001301.1 2030 2406 +
ChrX	stalkie_big_nohaplotig	CDS	14006812	14007792	99	-	0	ID=FBgn0001301.1.mrna1.cds4;Name=FBgn0001301.1;Parent=FBgn0001301.1.mrna1;Target=FBgn0001301.1 2407 3387 +
ChrX	stalkie_big_nohaplotig	mRNA	14435311	14438109	.	-	.	ID=ORF153.mrna1;Name=ORF153;Parent=ORF153.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2740;mismatches=5;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	14437503	14438109	99	-	.	ID=ORF153.mrna1.exon1;Name=ORF153;Parent=ORF153.mrna1;Target=ORF153 1 607 +
ChrX	stalkie_big_nohaplotig	exon	14435311	14437448	99	-	.	ID=ORF153.mrna1.exon2;Name=ORF153;Parent=ORF153.mrna1;Target=ORF153 608 2745 +
ChrX	stalkie_big_nohaplotig	CDS	14437503	14438109	99	-	0	ID=ORF153.mrna1.cds1;Name=ORF153;Parent=ORF153.mrna1;Target=ORF153 1 607 +
ChrX	stalkie_big_nohaplotig	CDS	14435311	14437448	99	-	1	ID=ORF153.mrna1.cds2;Name=ORF153;Parent=ORF153.mrna1;Target=ORF153 608 2745 +
ChrX	stalkie_big_nohaplotig	mRNA	14549209	14585652	.	+	.	ID=FBgn0031993.1.mrna1;Name=FBgn0031993.1;Parent=FBgn0031993.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=7213;mismatches=8;indels=18;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	14549209	14549305	100	+	.	ID=FBgn0031993.1.mrna1.exon1;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 1 97 +
ChrX	stalkie_big_nohaplotig	exon	14551361	14551631	100	+	.	ID=FBgn0031993.1.mrna1.exon2;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 98 368 +
ChrX	stalkie_big_nohaplotig	exon	14551735	14551931	100	+	.	ID=FBgn0031993.1.mrna1.exon3;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 369 565 +
ChrX	stalkie_big_nohaplotig	exon	14552291	14552417	100	+	.	ID=FBgn0031993.1.mrna1.exon4;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 566 692 +
ChrX	stalkie_big_nohaplotig	exon	14552478	14552766	100	+	.	ID=FBgn0031993.1.mrna1.exon5;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 693 981 +
ChrX	stalkie_big_nohaplotig	exon	14557901	14557963	100	+	.	ID=FBgn0031993.1.mrna1.exon6;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 982 1044 +
ChrX	stalkie_big_nohaplotig	exon	14559025	14559258	99	+	.	ID=FBgn0031993.1.mrna1.exon7;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 1045 1278 +
ChrX	stalkie_big_nohaplotig	exon	14559833	14560030	100	+	.	ID=FBgn0031993.1.mrna1.exon8;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 1279 1476 +
ChrX	stalkie_big_nohaplotig	exon	14561444	14561970	99	+	.	ID=FBgn0031993.1.mrna1.exon9;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 1477 2003 +
ChrX	stalkie_big_nohaplotig	exon	14562081	14562474	100	+	.	ID=FBgn0031993.1.mrna1.exon10;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 2004 2397 +
ChrX	stalkie_big_nohaplotig	exon	14562555	14562728	100	+	.	ID=FBgn0031993.1.mrna1.exon11;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 2398 2571 +
ChrX	stalkie_big_nohaplotig	exon	14562903	14563398	99	+	.	ID=FBgn0031993.1.mrna1.exon12;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 2572 3067 +
ChrX	stalkie_big_nohaplotig	exon	14563470	14564265	100	+	.	ID=FBgn0031993.1.mrna1.exon13;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 3068 3863 +
ChrX	stalkie_big_nohaplotig	exon	14564333	14564487	100	+	.	ID=FBgn0031993.1.mrna1.exon14;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 3864 4018 +
ChrX	stalkie_big_nohaplotig	exon	14568405	14568461	100	+	.	ID=FBgn0031993.1.mrna1.exon15;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 4019 4075 +
ChrX	stalkie_big_nohaplotig	exon	14571948	14572096	100	+	.	ID=FBgn0031993.1.mrna1.exon16;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 4076 4224 +
ChrX	stalkie_big_nohaplotig	exon	14574239	14574485	93	+	.	ID=FBgn0031993.1.mrna1.exon17;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 4225 4489 +
ChrX	stalkie_big_nohaplotig	exon	14574632	14574762	99	+	.	ID=FBgn0031993.1.mrna1.exon18;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 4490 4620 +
ChrX	stalkie_big_nohaplotig	exon	14574842	14574906	100	+	.	ID=FBgn0031993.1.mrna1.exon19;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 4621 4685 +
ChrX	stalkie_big_nohaplotig	exon	14580756	14580894	100	+	.	ID=FBgn0031993.1.mrna1.exon20;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 4686 4824 +
ChrX	stalkie_big_nohaplotig	exon	14580968	14581245	100	+	.	ID=FBgn0031993.1.mrna1.exon21;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 4825 5102 +
ChrX	stalkie_big_nohaplotig	exon	14581317	14581394	100	+	.	ID=FBgn0031993.1.mrna1.exon22;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 5103 5180 +
ChrX	stalkie_big_nohaplotig	exon	14582480	14582680	100	+	.	ID=FBgn0031993.1.mrna1.exon23;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 5181 5381 +
ChrX	stalkie_big_nohaplotig	exon	14582762	14582906	100	+	.	ID=FBgn0031993.1.mrna1.exon24;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 5382 5526 +
ChrX	stalkie_big_nohaplotig	exon	14582963	14583342	100	+	.	ID=FBgn0031993.1.mrna1.exon25;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 5527 5906 +
ChrX	stalkie_big_nohaplotig	exon	14583402	14583955	100	+	.	ID=FBgn0031993.1.mrna1.exon26;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 5907 6460 +
ChrX	stalkie_big_nohaplotig	exon	14584018	14584275	99	+	.	ID=FBgn0031993.1.mrna1.exon27;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 6461 6718 +
ChrX	stalkie_big_nohaplotig	exon	14584346	14584544	100	+	.	ID=FBgn0031993.1.mrna1.exon28;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 6719 6917 +
ChrX	stalkie_big_nohaplotig	exon	14584609	14584750	99	+	.	ID=FBgn0031993.1.mrna1.exon29;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 6918 7059 +
ChrX	stalkie_big_nohaplotig	exon	14585473	14585652	100	+	.	ID=FBgn0031993.1.mrna1.exon30;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 7060 7239 +
ChrX	stalkie_big_nohaplotig	CDS	14549209	14549305	100	+	0	ID=FBgn0031993.1.mrna1.cds1;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 1 97 +
ChrX	stalkie_big_nohaplotig	CDS	14551361	14551631	100	+	1	ID=FBgn0031993.1.mrna1.cds2;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 98 368 +
ChrX	stalkie_big_nohaplotig	CDS	14551735	14551931	100	+	2	ID=FBgn0031993.1.mrna1.cds3;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 369 565 +
ChrX	stalkie_big_nohaplotig	CDS	14552291	14552417	100	+	1	ID=FBgn0031993.1.mrna1.cds4;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 566 692 +
ChrX	stalkie_big_nohaplotig	CDS	14552478	14552766	100	+	2	ID=FBgn0031993.1.mrna1.cds5;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 693 981 +
ChrX	stalkie_big_nohaplotig	CDS	14557901	14557963	100	+	0	ID=FBgn0031993.1.mrna1.cds6;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 982 1044 +
ChrX	stalkie_big_nohaplotig	CDS	14559025	14559258	99	+	0	ID=FBgn0031993.1.mrna1.cds7;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 1045 1278 +
ChrX	stalkie_big_nohaplotig	CDS	14559833	14560030	100	+	0	ID=FBgn0031993.1.mrna1.cds8;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 1279 1476 +
ChrX	stalkie_big_nohaplotig	CDS	14561444	14561970	99	+	0	ID=FBgn0031993.1.mrna1.cds9;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 1477 2003 +
ChrX	stalkie_big_nohaplotig	CDS	14562081	14562474	100	+	2	ID=FBgn0031993.1.mrna1.cds10;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 2004 2397 +
ChrX	stalkie_big_nohaplotig	CDS	14562555	14562728	100	+	0	ID=FBgn0031993.1.mrna1.cds11;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 2398 2571 +
ChrX	stalkie_big_nohaplotig	CDS	14562903	14563398	99	+	0	ID=FBgn0031993.1.mrna1.cds12;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 2572 3067 +
ChrX	stalkie_big_nohaplotig	CDS	14563470	14564265	100	+	1	ID=FBgn0031993.1.mrna1.cds13;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 3068 3863 +
ChrX	stalkie_big_nohaplotig	CDS	14564333	14564487	100	+	2	ID=FBgn0031993.1.mrna1.cds14;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 3864 4018 +
ChrX	stalkie_big_nohaplotig	CDS	14568405	14568461	100	+	1	ID=FBgn0031993.1.mrna1.cds15;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 4019 4075 +
ChrX	stalkie_big_nohaplotig	CDS	14571948	14572096	100	+	1	ID=FBgn0031993.1.mrna1.cds16;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 4076 4224 +
ChrX	stalkie_big_nohaplotig	CDS	14574239	14574485	93	+	0	ID=FBgn0031993.1.mrna1.cds17;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 4225 4489 +
ChrX	stalkie_big_nohaplotig	CDS	14574632	14574762	99	+	1	ID=FBgn0031993.1.mrna1.cds18;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 4490 4620 +
ChrX	stalkie_big_nohaplotig	CDS	14574842	14574906	100	+	0	ID=FBgn0031993.1.mrna1.cds19;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 4621 4685 +
ChrX	stalkie_big_nohaplotig	CDS	14580756	14580894	100	+	2	ID=FBgn0031993.1.mrna1.cds20;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 4686 4824 +
ChrX	stalkie_big_nohaplotig	CDS	14580968	14581245	100	+	0	ID=FBgn0031993.1.mrna1.cds21;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 4825 5102 +
ChrX	stalkie_big_nohaplotig	CDS	14581317	14581394	100	+	2	ID=FBgn0031993.1.mrna1.cds22;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 5103 5180 +
ChrX	stalkie_big_nohaplotig	CDS	14582480	14582680	100	+	2	ID=FBgn0031993.1.mrna1.cds23;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 5181 5381 +
ChrX	stalkie_big_nohaplotig	CDS	14582762	14582906	100	+	2	ID=FBgn0031993.1.mrna1.cds24;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 5382 5526 +
ChrX	stalkie_big_nohaplotig	CDS	14582963	14583342	100	+	0	ID=FBgn0031993.1.mrna1.cds25;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 5527 5906 +
ChrX	stalkie_big_nohaplotig	CDS	14583402	14583955	100	+	2	ID=FBgn0031993.1.mrna1.cds26;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 5907 6460 +
ChrX	stalkie_big_nohaplotig	CDS	14584018	14584275	99	+	1	ID=FBgn0031993.1.mrna1.cds27;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 6461 6718 +
ChrX	stalkie_big_nohaplotig	CDS	14584346	14584544	100	+	1	ID=FBgn0031993.1.mrna1.cds28;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 6719 6917 +
ChrX	stalkie_big_nohaplotig	CDS	14584609	14584750	99	+	2	ID=FBgn0031993.1.mrna1.cds29;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 6918 7059 +
ChrX	stalkie_big_nohaplotig	CDS	14585473	14585652	100	+	0	ID=FBgn0031993.1.mrna1.cds30;Name=FBgn0031993.1;Parent=FBgn0031993.1.mrna1;Target=FBgn0031993.1 7060 7239 +
ChrX	stalkie_big_nohaplotig	mRNA	14353407	14356916	.	-	.	ID=FBgn0032682.1.mrna1;Name=FBgn0032682.1;Parent=FBgn0032682.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=764;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	14356613	14356916	100	-	.	ID=FBgn0032682.1.mrna1.exon1;Name=FBgn0032682.1;Parent=FBgn0032682.1.mrna1;Target=FBgn0032682.1 1 304 +
ChrX	stalkie_big_nohaplotig	exon	14353694	14353990	99	-	.	ID=FBgn0032682.1.mrna1.exon2;Name=FBgn0032682.1;Parent=FBgn0032682.1.mrna1;Target=FBgn0032682.1 305 601 +
ChrX	stalkie_big_nohaplotig	exon	14353407	14353570	100	-	.	ID=FBgn0032682.1.mrna1.exon3;Name=FBgn0032682.1;Parent=FBgn0032682.1.mrna1;Target=FBgn0032682.1 602 765 +
ChrX	stalkie_big_nohaplotig	CDS	14356613	14356916	100	-	0	ID=FBgn0032682.1.mrna1.cds1;Name=FBgn0032682.1;Parent=FBgn0032682.1.mrna1;Target=FBgn0032682.1 1 304 +
ChrX	stalkie_big_nohaplotig	CDS	14353694	14353990	99	-	1	ID=FBgn0032682.1.mrna1.cds2;Name=FBgn0032682.1;Parent=FBgn0032682.1.mrna1;Target=FBgn0032682.1 305 601 +
ChrX	stalkie_big_nohaplotig	CDS	14353407	14353570	100	-	1	ID=FBgn0032682.1.mrna1.cds3;Name=FBgn0032682.1;Parent=FBgn0032682.1.mrna1;Target=FBgn0032682.1 602 765 +
ChrX	stalkie_big_nohaplotig	mRNA	13270394	13277034	.	+	.	ID=FBgn0026015.2.mrna1;Name=FBgn0026015.2;Parent=FBgn0026015.2.path1;Dir=sensecoverage=100.0;identity=99.7;matches=2085;mismatches=6;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	13270394	13270490	100	+	.	ID=FBgn0026015.2.mrna1.exon1;Name=FBgn0026015.2;Parent=FBgn0026015.2.mrna1;Target=FBgn0026015.2 1 97 +
ChrX	stalkie_big_nohaplotig	exon	13274612	13275362	99	+	.	ID=FBgn0026015.2.mrna1.exon2;Name=FBgn0026015.2;Parent=FBgn0026015.2.mrna1;Target=FBgn0026015.2 98 848 +
ChrX	stalkie_big_nohaplotig	exon	13275429	13275629	100	+	.	ID=FBgn0026015.2.mrna1.exon3;Name=FBgn0026015.2;Parent=FBgn0026015.2.mrna1;Target=FBgn0026015.2 849 1049 +
ChrX	stalkie_big_nohaplotig	exon	13275692	13276286	99	+	.	ID=FBgn0026015.2.mrna1.exon4;Name=FBgn0026015.2;Parent=FBgn0026015.2.mrna1;Target=FBgn0026015.2 1050 1644 +
ChrX	stalkie_big_nohaplotig	exon	13276417	13276608	100	+	.	ID=FBgn0026015.2.mrna1.exon5;Name=FBgn0026015.2;Parent=FBgn0026015.2.mrna1;Target=FBgn0026015.2 1645 1836 +
ChrX	stalkie_big_nohaplotig	exon	13276668	13276726	98	+	.	ID=FBgn0026015.2.mrna1.exon6;Name=FBgn0026015.2;Parent=FBgn0026015.2.mrna1;Target=FBgn0026015.2 1837 1895 +
ChrX	stalkie_big_nohaplotig	exon	13276781	13276866	98	+	.	ID=FBgn0026015.2.mrna1.exon7;Name=FBgn0026015.2;Parent=FBgn0026015.2.mrna1;Target=FBgn0026015.2 1896 1981 +
ChrX	stalkie_big_nohaplotig	exon	13276925	13277034	100	+	.	ID=FBgn0026015.2.mrna1.exon8;Name=FBgn0026015.2;Parent=FBgn0026015.2.mrna1;Target=FBgn0026015.2 1982 2091 +
ChrX	stalkie_big_nohaplotig	CDS	13270394	13270490	100	+	0	ID=FBgn0026015.2.mrna1.cds1;Name=FBgn0026015.2;Parent=FBgn0026015.2.mrna1;Target=FBgn0026015.2 1 97 +
ChrX	stalkie_big_nohaplotig	CDS	13274612	13275362	99	+	1	ID=FBgn0026015.2.mrna1.cds2;Name=FBgn0026015.2;Parent=FBgn0026015.2.mrna1;Target=FBgn0026015.2 98 848 +
ChrX	stalkie_big_nohaplotig	CDS	13275429	13275629	100	+	2	ID=FBgn0026015.2.mrna1.cds3;Name=FBgn0026015.2;Parent=FBgn0026015.2.mrna1;Target=FBgn0026015.2 849 1049 +
ChrX	stalkie_big_nohaplotig	CDS	13275692	13276286	99	+	2	ID=FBgn0026015.2.mrna1.cds4;Name=FBgn0026015.2;Parent=FBgn0026015.2.mrna1;Target=FBgn0026015.2 1050 1644 +
ChrX	stalkie_big_nohaplotig	CDS	13276417	13276608	100	+	0	ID=FBgn0026015.2.mrna1.cds5;Name=FBgn0026015.2;Parent=FBgn0026015.2.mrna1;Target=FBgn0026015.2 1645 1836 +
ChrX	stalkie_big_nohaplotig	CDS	13276668	13276726	98	+	0	ID=FBgn0026015.2.mrna1.cds6;Name=FBgn0026015.2;Parent=FBgn0026015.2.mrna1;Target=FBgn0026015.2 1837 1895 +
ChrX	stalkie_big_nohaplotig	CDS	13276781	13276866	98	+	2	ID=FBgn0026015.2.mrna1.cds7;Name=FBgn0026015.2;Parent=FBgn0026015.2.mrna1;Target=FBgn0026015.2 1896 1981 +
ChrX	stalkie_big_nohaplotig	CDS	13276925	13277034	100	+	1	ID=FBgn0026015.2.mrna1.cds8;Name=FBgn0026015.2;Parent=FBgn0026015.2.mrna1;Target=FBgn0026015.2 1982 2091 +
ChrX	stalkie_big_nohaplotig	mRNA	13476332	13519930	.	-	.	ID=FBgn0031944.1.mrna1;Name=FBgn0031944.1;Parent=FBgn0031944.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1330;mismatches=5;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	13519829	13519930	98	-	.	ID=FBgn0031944.1.mrna1.exon1;Name=FBgn0031944.1;Parent=FBgn0031944.1.mrna1;Target=FBgn0031944.1 1 102 +
ChrX	stalkie_big_nohaplotig	exon	13519679	13519761	100	-	.	ID=FBgn0031944.1.mrna1.exon2;Name=FBgn0031944.1;Parent=FBgn0031944.1.mrna1;Target=FBgn0031944.1 103 185 +
ChrX	stalkie_big_nohaplotig	exon	13485197	13485347	100	-	.	ID=FBgn0031944.1.mrna1.exon3;Name=FBgn0031944.1;Parent=FBgn0031944.1.mrna1;Target=FBgn0031944.1 186 336 +
ChrX	stalkie_big_nohaplotig	exon	13481393	13481527	100	-	.	ID=FBgn0031944.1.mrna1.exon4;Name=FBgn0031944.1;Parent=FBgn0031944.1.mrna1;Target=FBgn0031944.1 337 471 +
ChrX	stalkie_big_nohaplotig	exon	13481103	13481293	99	-	.	ID=FBgn0031944.1.mrna1.exon5;Name=FBgn0031944.1;Parent=FBgn0031944.1.mrna1;Target=FBgn0031944.1 472 662 +
ChrX	stalkie_big_nohaplotig	exon	13477042	13477209	99	-	.	ID=FBgn0031944.1.mrna1.exon6;Name=FBgn0031944.1;Parent=FBgn0031944.1.mrna1;Target=FBgn0031944.1 663 830 +
ChrX	stalkie_big_nohaplotig	exon	13476915	13476978	100	-	.	ID=FBgn0031944.1.mrna1.exon7;Name=FBgn0031944.1;Parent=FBgn0031944.1.mrna1;Target=FBgn0031944.1 831 894 +
ChrX	stalkie_big_nohaplotig	exon	13476542	13476844	99	-	.	ID=FBgn0031944.1.mrna1.exon8;Name=FBgn0031944.1;Parent=FBgn0031944.1.mrna1;Target=FBgn0031944.1 895 1197 +
ChrX	stalkie_big_nohaplotig	exon	13476332	13476469	100	-	.	ID=FBgn0031944.1.mrna1.exon9;Name=FBgn0031944.1;Parent=FBgn0031944.1.mrna1;Target=FBgn0031944.1 1198 1335 +
ChrX	stalkie_big_nohaplotig	CDS	13519829	13519930	98	-	0	ID=FBgn0031944.1.mrna1.cds1;Name=FBgn0031944.1;Parent=FBgn0031944.1.mrna1;Target=FBgn0031944.1 1 102 +
ChrX	stalkie_big_nohaplotig	CDS	13519679	13519761	100	-	0	ID=FBgn0031944.1.mrna1.cds2;Name=FBgn0031944.1;Parent=FBgn0031944.1.mrna1;Target=FBgn0031944.1 103 185 +
ChrX	stalkie_big_nohaplotig	CDS	13485197	13485347	100	-	2	ID=FBgn0031944.1.mrna1.cds3;Name=FBgn0031944.1;Parent=FBgn0031944.1.mrna1;Target=FBgn0031944.1 186 336 +
ChrX	stalkie_big_nohaplotig	CDS	13481393	13481527	100	-	0	ID=FBgn0031944.1.mrna1.cds4;Name=FBgn0031944.1;Parent=FBgn0031944.1.mrna1;Target=FBgn0031944.1 337 471 +
ChrX	stalkie_big_nohaplotig	CDS	13481103	13481293	99	-	0	ID=FBgn0031944.1.mrna1.cds5;Name=FBgn0031944.1;Parent=FBgn0031944.1.mrna1;Target=FBgn0031944.1 472 662 +
ChrX	stalkie_big_nohaplotig	CDS	13477042	13477209	99	-	2	ID=FBgn0031944.1.mrna1.cds6;Name=FBgn0031944.1;Parent=FBgn0031944.1.mrna1;Target=FBgn0031944.1 663 830 +
ChrX	stalkie_big_nohaplotig	CDS	13476915	13476978	100	-	2	ID=FBgn0031944.1.mrna1.cds7;Name=FBgn0031944.1;Parent=FBgn0031944.1.mrna1;Target=FBgn0031944.1 831 894 +
ChrX	stalkie_big_nohaplotig	CDS	13476542	13476844	99	-	0	ID=FBgn0031944.1.mrna1.cds8;Name=FBgn0031944.1;Parent=FBgn0031944.1.mrna1;Target=FBgn0031944.1 895 1197 +
ChrX	stalkie_big_nohaplotig	CDS	13476332	13476469	100	-	0	ID=FBgn0031944.1.mrna1.cds9;Name=FBgn0031944.1;Parent=FBgn0031944.1.mrna1;Target=FBgn0031944.1 1198 1335 +
ChrX	stalkie_big_nohaplotig	mRNA	13392418	13395008	.	-	.	ID=FBgn0031947.1.mrna1;Name=FBgn0031947.1;Parent=FBgn0031947.1.path1;Dir=sensecoverage=99.9;identity=100.0;matches=2412;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	13394550	13395008	99	-	.	ID=FBgn0031947.1.mrna1.exon1;Name=FBgn0031947.1;Parent=FBgn0031947.1.mrna1;Target=FBgn0031947.1 1 459 +
ChrX	stalkie_big_nohaplotig	exon	13392811	13394500	100	-	.	ID=FBgn0031947.1.mrna1.exon2;Name=FBgn0031947.1;Parent=FBgn0031947.1.mrna1;Target=FBgn0031947.1 460 2149 +
ChrX	stalkie_big_nohaplotig	exon	13392418	13392681	100	-	.	ID=FBgn0031947.1.mrna1.exon3;Name=FBgn0031947.1;Parent=FBgn0031947.1.mrna1;Target=FBgn0031947.1 2150 2413 +
ChrX	stalkie_big_nohaplotig	CDS	13394550	13395008	99	-	0	ID=FBgn0031947.1.mrna1.cds1;Name=FBgn0031947.1;Parent=FBgn0031947.1.mrna1;Target=FBgn0031947.1 1 459 +
ChrX	stalkie_big_nohaplotig	CDS	13392811	13394500	100	-	0	ID=FBgn0031947.1.mrna1.cds2;Name=FBgn0031947.1;Parent=FBgn0031947.1.mrna1;Target=FBgn0031947.1 460 2149 +
ChrX	stalkie_big_nohaplotig	CDS	13392419	13392681	100	-	1	ID=FBgn0031947.1.mrna1.cds3;Name=FBgn0031947.1;Parent=FBgn0031947.1.mrna1;Target=FBgn0031947.1 2150 2412 +
ChrX	stalkie_big_nohaplotig	mRNA	13675850	13682952	.	-	.	ID=FBgn0031934.1.mrna1;Name=FBgn0031934.1;Parent=FBgn0031934.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1853;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	13682700	13682952	99	-	.	ID=FBgn0031934.1.mrna1.exon1;Name=FBgn0031934.1;Parent=FBgn0031934.1.mrna1;Target=FBgn0031934.1 1 253 +
ChrX	stalkie_big_nohaplotig	exon	13680999	13681130	100	-	.	ID=FBgn0031934.1.mrna1.exon2;Name=FBgn0031934.1;Parent=FBgn0031934.1.mrna1;Target=FBgn0031934.1 254 385 +
ChrX	stalkie_big_nohaplotig	exon	13680773	13680936	100	-	.	ID=FBgn0031934.1.mrna1.exon3;Name=FBgn0031934.1;Parent=FBgn0031934.1.mrna1;Target=FBgn0031934.1 386 549 +
ChrX	stalkie_big_nohaplotig	exon	13680650	13680711	100	-	.	ID=FBgn0031934.1.mrna1.exon4;Name=FBgn0031934.1;Parent=FBgn0031934.1.mrna1;Target=FBgn0031934.1 550 611 +
ChrX	stalkie_big_nohaplotig	exon	13678809	13678932	100	-	.	ID=FBgn0031934.1.mrna1.exon5;Name=FBgn0031934.1;Parent=FBgn0031934.1.mrna1;Target=FBgn0031934.1 612 735 +
ChrX	stalkie_big_nohaplotig	exon	13678416	13678749	100	-	.	ID=FBgn0031934.1.mrna1.exon6;Name=FBgn0031934.1;Parent=FBgn0031934.1.mrna1;Target=FBgn0031934.1 736 1069 +
ChrX	stalkie_big_nohaplotig	exon	13678188	13678339	100	-	.	ID=FBgn0031934.1.mrna1.exon7;Name=FBgn0031934.1;Parent=FBgn0031934.1.mrna1;Target=FBgn0031934.1 1070 1221 +
ChrX	stalkie_big_nohaplotig	exon	13676479	13676607	100	-	.	ID=FBgn0031934.1.mrna1.exon8;Name=FBgn0031934.1;Parent=FBgn0031934.1.mrna1;Target=FBgn0031934.1 1222 1350 +
ChrX	stalkie_big_nohaplotig	exon	13676210	13676410	100	-	.	ID=FBgn0031934.1.mrna1.exon9;Name=FBgn0031934.1;Parent=FBgn0031934.1.mrna1;Target=FBgn0031934.1 1351 1551 +
ChrX	stalkie_big_nohaplotig	exon	13675850	13676152	100	-	.	ID=FBgn0031934.1.mrna1.exon10;Name=FBgn0031934.1;Parent=FBgn0031934.1.mrna1;Target=FBgn0031934.1 1552 1854 +
ChrX	stalkie_big_nohaplotig	CDS	13682700	13682952	99	-	0	ID=FBgn0031934.1.mrna1.cds1;Name=FBgn0031934.1;Parent=FBgn0031934.1.mrna1;Target=FBgn0031934.1 1 253 +
ChrX	stalkie_big_nohaplotig	CDS	13680999	13681130	100	-	1	ID=FBgn0031934.1.mrna1.cds2;Name=FBgn0031934.1;Parent=FBgn0031934.1.mrna1;Target=FBgn0031934.1 254 385 +
ChrX	stalkie_big_nohaplotig	CDS	13680773	13680936	100	-	1	ID=FBgn0031934.1.mrna1.cds3;Name=FBgn0031934.1;Parent=FBgn0031934.1.mrna1;Target=FBgn0031934.1 386 549 +
ChrX	stalkie_big_nohaplotig	CDS	13680650	13680711	100	-	0	ID=FBgn0031934.1.mrna1.cds4;Name=FBgn0031934.1;Parent=FBgn0031934.1.mrna1;Target=FBgn0031934.1 550 611 +
ChrX	stalkie_big_nohaplotig	CDS	13678809	13678932	100	-	2	ID=FBgn0031934.1.mrna1.cds5;Name=FBgn0031934.1;Parent=FBgn0031934.1.mrna1;Target=FBgn0031934.1 612 735 +
ChrX	stalkie_big_nohaplotig	CDS	13678416	13678749	100	-	0	ID=FBgn0031934.1.mrna1.cds6;Name=FBgn0031934.1;Parent=FBgn0031934.1.mrna1;Target=FBgn0031934.1 736 1069 +
ChrX	stalkie_big_nohaplotig	CDS	13678188	13678339	100	-	1	ID=FBgn0031934.1.mrna1.cds7;Name=FBgn0031934.1;Parent=FBgn0031934.1.mrna1;Target=FBgn0031934.1 1070 1221 +
ChrX	stalkie_big_nohaplotig	CDS	13676479	13676607	100	-	0	ID=FBgn0031934.1.mrna1.cds8;Name=FBgn0031934.1;Parent=FBgn0031934.1.mrna1;Target=FBgn0031934.1 1222 1350 +
ChrX	stalkie_big_nohaplotig	CDS	13676210	13676410	100	-	0	ID=FBgn0031934.1.mrna1.cds9;Name=FBgn0031934.1;Parent=FBgn0031934.1.mrna1;Target=FBgn0031934.1 1351 1551 +
ChrX	stalkie_big_nohaplotig	CDS	13675850	13676152	100	-	0	ID=FBgn0031934.1.mrna1.cds10;Name=FBgn0031934.1;Parent=FBgn0031934.1.mrna1;Target=FBgn0031934.1 1552 1854 +
ChrX	stalkie_big_nohaplotig	mRNA	13227498	13250232	.	+	.	ID=FBgn0028425.1.mrna1;Name=FBgn0028425.1;Parent=FBgn0028425.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1590;mismatches=3;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	13227498	13227796	100	+	.	ID=FBgn0028425.1.mrna1.exon1;Name=FBgn0028425.1;Parent=FBgn0028425.1.mrna1;Target=FBgn0028425.1 1 299 +
ChrX	stalkie_big_nohaplotig	exon	13233652	13233847	100	+	.	ID=FBgn0028425.1.mrna1.exon2;Name=FBgn0028425.1;Parent=FBgn0028425.1.mrna1;Target=FBgn0028425.1 300 495 +
ChrX	stalkie_big_nohaplotig	exon	13238154	13238256	99	+	.	ID=FBgn0028425.1.mrna1.exon3;Name=FBgn0028425.1;Parent=FBgn0028425.1.mrna1;Target=FBgn0028425.1 496 598 +
ChrX	stalkie_big_nohaplotig	exon	13238352	13238619	99	+	.	ID=FBgn0028425.1.mrna1.exon4;Name=FBgn0028425.1;Parent=FBgn0028425.1.mrna1;Target=FBgn0028425.1 599 866 +
ChrX	stalkie_big_nohaplotig	exon	13249019	13249343	99	+	.	ID=FBgn0028425.1.mrna1.exon5;Name=FBgn0028425.1;Parent=FBgn0028425.1.mrna1;Target=FBgn0028425.1 867 1191 +
ChrX	stalkie_big_nohaplotig	exon	13249774	13249898	100	+	.	ID=FBgn0028425.1.mrna1.exon6;Name=FBgn0028425.1;Parent=FBgn0028425.1.mrna1;Target=FBgn0028425.1 1192 1316 +
ChrX	stalkie_big_nohaplotig	exon	13249956	13250232	100	+	.	ID=FBgn0028425.1.mrna1.exon7;Name=FBgn0028425.1;Parent=FBgn0028425.1.mrna1;Target=FBgn0028425.1 1317 1593 +
ChrX	stalkie_big_nohaplotig	CDS	13227498	13227796	100	+	0	ID=FBgn0028425.1.mrna1.cds1;Name=FBgn0028425.1;Parent=FBgn0028425.1.mrna1;Target=FBgn0028425.1 1 299 +
ChrX	stalkie_big_nohaplotig	CDS	13233652	13233847	100	+	2	ID=FBgn0028425.1.mrna1.cds2;Name=FBgn0028425.1;Parent=FBgn0028425.1.mrna1;Target=FBgn0028425.1 300 495 +
ChrX	stalkie_big_nohaplotig	CDS	13238154	13238256	99	+	0	ID=FBgn0028425.1.mrna1.cds3;Name=FBgn0028425.1;Parent=FBgn0028425.1.mrna1;Target=FBgn0028425.1 496 598 +
ChrX	stalkie_big_nohaplotig	CDS	13238352	13238619	99	+	1	ID=FBgn0028425.1.mrna1.cds4;Name=FBgn0028425.1;Parent=FBgn0028425.1.mrna1;Target=FBgn0028425.1 599 866 +
ChrX	stalkie_big_nohaplotig	CDS	13249019	13249343	99	+	2	ID=FBgn0028425.1.mrna1.cds5;Name=FBgn0028425.1;Parent=FBgn0028425.1.mrna1;Target=FBgn0028425.1 867 1191 +
ChrX	stalkie_big_nohaplotig	CDS	13249774	13249898	100	+	0	ID=FBgn0028425.1.mrna1.cds6;Name=FBgn0028425.1;Parent=FBgn0028425.1.mrna1;Target=FBgn0028425.1 1192 1316 +
ChrX	stalkie_big_nohaplotig	CDS	13249956	13250232	100	+	2	ID=FBgn0028425.1.mrna1.cds7;Name=FBgn0028425.1;Parent=FBgn0028425.1.mrna1;Target=FBgn0028425.1 1317 1593 +
Chr1	stalkie_big_nohaplotig	mRNA	62826973	62830237	.	-	.	ID=FBgn0036483.1.mrna1;Name=FBgn0036483.1;Parent=FBgn0036483.1.path1;Dir=sensecoverage=99.7;identity=99.9;matches=2643;mismatches=2;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	62829837	62830237	100	-	.	ID=FBgn0036483.1.mrna1.exon1;Name=FBgn0036483.1;Parent=FBgn0036483.1.mrna1;Target=FBgn0036483.1 10 410 +
Chr1	stalkie_big_nohaplotig	exon	62829492	62829774	100	-	.	ID=FBgn0036483.1.mrna1.exon2;Name=FBgn0036483.1;Parent=FBgn0036483.1.mrna1;Target=FBgn0036483.1 411 693 +
Chr1	stalkie_big_nohaplotig	exon	62829336	62829421	100	-	.	ID=FBgn0036483.1.mrna1.exon3;Name=FBgn0036483.1;Parent=FBgn0036483.1.mrna1;Target=FBgn0036483.1 694 779 +
Chr1	stalkie_big_nohaplotig	exon	62828995	62829271	100	-	.	ID=FBgn0036483.1.mrna1.exon4;Name=FBgn0036483.1;Parent=FBgn0036483.1.mrna1;Target=FBgn0036483.1 780 1056 +
Chr1	stalkie_big_nohaplotig	exon	62828889	62828930	100	-	.	ID=FBgn0036483.1.mrna1.exon5;Name=FBgn0036483.1;Parent=FBgn0036483.1.mrna1;Target=FBgn0036483.1 1057 1098 +
Chr1	stalkie_big_nohaplotig	exon	62827670	62828644	99	-	.	ID=FBgn0036483.1.mrna1.exon6;Name=FBgn0036483.1;Parent=FBgn0036483.1.mrna1;Target=FBgn0036483.1 1099 2073 +
Chr1	stalkie_big_nohaplotig	exon	62827392	62827614	100	-	.	ID=FBgn0036483.1.mrna1.exon7;Name=FBgn0036483.1;Parent=FBgn0036483.1.mrna1;Target=FBgn0036483.1 2074 2296 +
Chr1	stalkie_big_nohaplotig	exon	62826973	62827330	99	-	.	ID=FBgn0036483.1.mrna1.exon8;Name=FBgn0036483.1;Parent=FBgn0036483.1.mrna1;Target=FBgn0036483.1 2297 2655 +
Chr1	stalkie_big_nohaplotig	CDS	62829837	62830237	100	-	0	ID=FBgn0036483.1.mrna1.cds1;Name=FBgn0036483.1;Parent=FBgn0036483.1.mrna1;Target=FBgn0036483.1 10 410 +
Chr1	stalkie_big_nohaplotig	CDS	62829492	62829774	100	-	2	ID=FBgn0036483.1.mrna1.cds2;Name=FBgn0036483.1;Parent=FBgn0036483.1.mrna1;Target=FBgn0036483.1 411 693 +
Chr1	stalkie_big_nohaplotig	CDS	62829336	62829421	100	-	0	ID=FBgn0036483.1.mrna1.cds3;Name=FBgn0036483.1;Parent=FBgn0036483.1.mrna1;Target=FBgn0036483.1 694 779 +
Chr1	stalkie_big_nohaplotig	CDS	62828995	62829271	100	-	2	ID=FBgn0036483.1.mrna1.cds4;Name=FBgn0036483.1;Parent=FBgn0036483.1.mrna1;Target=FBgn0036483.1 780 1056 +
Chr1	stalkie_big_nohaplotig	CDS	62828889	62828930	100	-	0	ID=FBgn0036483.1.mrna1.cds5;Name=FBgn0036483.1;Parent=FBgn0036483.1.mrna1;Target=FBgn0036483.1 1057 1098 +
Chr1	stalkie_big_nohaplotig	CDS	62827670	62828644	99	-	0	ID=FBgn0036483.1.mrna1.cds6;Name=FBgn0036483.1;Parent=FBgn0036483.1.mrna1;Target=FBgn0036483.1 1099 2073 +
Chr1	stalkie_big_nohaplotig	CDS	62827392	62827614	100	-	0	ID=FBgn0036483.1.mrna1.cds7;Name=FBgn0036483.1;Parent=FBgn0036483.1.mrna1;Target=FBgn0036483.1 2074 2296 +
Chr1	stalkie_big_nohaplotig	CDS	62826973	62827330	99	-	1	ID=FBgn0036483.1.mrna1.cds8;Name=FBgn0036483.1;Parent=FBgn0036483.1.mrna1;Target=FBgn0036483.1 2297 2655 +
Chr1	stalkie_big_nohaplotig	mRNA	62846701	62847447	.	-	.	ID=FBgn0047178.1.mrna1;Name=FBgn0047178.1;Parent=FBgn0047178.1.path1;Dir=sensecoverage=99.8;identity=90.1;matches=580;mismatches=62;indels=2;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	62847220	62847447	95	-	.	ID=FBgn0047178.1.mrna1.exon1;Name=FBgn0047178.1;Parent=FBgn0047178.1.mrna1;Target=FBgn0047178.1 2 231 +
Chr1	stalkie_big_nohaplotig	exon	62846701	62847114	86	-	.	ID=FBgn0047178.1.mrna1.exon2;Name=FBgn0047178.1;Parent=FBgn0047178.1.mrna1;Target=FBgn0047178.1 232 645 +
Chr1	stalkie_big_nohaplotig	CDS	62847408	62847447	92	-	0	ID=FBgn0047178.1.mrna1.cds1;Name=FBgn0047178.1;Parent=FBgn0047178.1.mrna1;Target=FBgn0047178.1 2 43 +
Chr1	stalkie_big_nohaplotig	mRNA	62889882	62892691	.	-	.	ID=FBgn0036199.1.mrna1;Name=FBgn0036199.1;Parent=FBgn0036199.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=927;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	62892604	62892691	100	-	.	ID=FBgn0036199.1.mrna1.exon1;Name=FBgn0036199.1;Parent=FBgn0036199.1.mrna1;Target=FBgn0036199.1 1 88 +
Chr1	stalkie_big_nohaplotig	exon	62892340	62892487	99	-	.	ID=FBgn0036199.1.mrna1.exon2;Name=FBgn0036199.1;Parent=FBgn0036199.1.mrna1;Target=FBgn0036199.1 89 236 +
Chr1	stalkie_big_nohaplotig	exon	62890351	62890770	99	-	.	ID=FBgn0036199.1.mrna1.exon3;Name=FBgn0036199.1;Parent=FBgn0036199.1.mrna1;Target=FBgn0036199.1 237 656 +
Chr1	stalkie_big_nohaplotig	exon	62890222	62890282	100	-	.	ID=FBgn0036199.1.mrna1.exon4;Name=FBgn0036199.1;Parent=FBgn0036199.1.mrna1;Target=FBgn0036199.1 657 717 +
Chr1	stalkie_big_nohaplotig	exon	62890065	62890163	100	-	.	ID=FBgn0036199.1.mrna1.exon5;Name=FBgn0036199.1;Parent=FBgn0036199.1.mrna1;Target=FBgn0036199.1 718 816 +
Chr1	stalkie_big_nohaplotig	exon	62889882	62889995	99	-	.	ID=FBgn0036199.1.mrna1.exon6;Name=FBgn0036199.1;Parent=FBgn0036199.1.mrna1;Target=FBgn0036199.1 817 930 +
Chr1	stalkie_big_nohaplotig	CDS	62892604	62892691	100	-	0	ID=FBgn0036199.1.mrna1.cds1;Name=FBgn0036199.1;Parent=FBgn0036199.1.mrna1;Target=FBgn0036199.1 1 88 +
Chr1	stalkie_big_nohaplotig	CDS	62892340	62892487	99	-	1	ID=FBgn0036199.1.mrna1.cds2;Name=FBgn0036199.1;Parent=FBgn0036199.1.mrna1;Target=FBgn0036199.1 89 236 +
Chr1	stalkie_big_nohaplotig	CDS	62890351	62890770	99	-	2	ID=FBgn0036199.1.mrna1.cds3;Name=FBgn0036199.1;Parent=FBgn0036199.1.mrna1;Target=FBgn0036199.1 237 656 +
Chr1	stalkie_big_nohaplotig	CDS	62890222	62890282	100	-	2	ID=FBgn0036199.1.mrna1.cds4;Name=FBgn0036199.1;Parent=FBgn0036199.1.mrna1;Target=FBgn0036199.1 657 717 +
Chr1	stalkie_big_nohaplotig	CDS	62890065	62890163	100	-	0	ID=FBgn0036199.1.mrna1.cds5;Name=FBgn0036199.1;Parent=FBgn0036199.1.mrna1;Target=FBgn0036199.1 718 816 +
Chr1	stalkie_big_nohaplotig	CDS	62889882	62889995	99	-	0	ID=FBgn0036199.1.mrna1.cds6;Name=FBgn0036199.1;Parent=FBgn0036199.1.mrna1;Target=FBgn0036199.1 817 930 +
Chr1	stalkie_big_nohaplotig	mRNA	62995833	63001220	.	+	.	ID=ORF167.mrna1;Name=ORF167;Parent=ORF167.path1;Dir=sensecoverage=100.0;identity=99.5;matches=2684;mismatches=12;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	62995833	62995893	100	+	.	ID=ORF167.mrna1.exon1;Name=ORF167;Parent=ORF167.mrna1;Target=ORF167 1 61 +
Chr1	stalkie_big_nohaplotig	exon	62995952	62996151	98	+	.	ID=ORF167.mrna1.exon2;Name=ORF167;Parent=ORF167.mrna1;Target=ORF167 62 261 +
Chr1	stalkie_big_nohaplotig	exon	62998717	62998801	100	+	.	ID=ORF167.mrna1.exon3;Name=ORF167;Parent=ORF167.mrna1;Target=ORF167 262 346 +
Chr1	stalkie_big_nohaplotig	exon	62998871	63001220	99	+	.	ID=ORF167.mrna1.exon4;Name=ORF167;Parent=ORF167.mrna1;Target=ORF167 347 2697 +
Chr1	stalkie_big_nohaplotig	CDS	62995833	62995893	100	+	0	ID=ORF167.mrna1.cds1;Name=ORF167;Parent=ORF167.mrna1;Target=ORF167 1 61 +
Chr1	stalkie_big_nohaplotig	CDS	62995952	62996151	98	+	1	ID=ORF167.mrna1.cds2;Name=ORF167;Parent=ORF167.mrna1;Target=ORF167 62 261 +
Chr1	stalkie_big_nohaplotig	CDS	62998717	62998801	100	+	0	ID=ORF167.mrna1.cds3;Name=ORF167;Parent=ORF167.mrna1;Target=ORF167 262 346 +
Chr1	stalkie_big_nohaplotig	CDS	62998871	63001220	99	+	1	ID=ORF167.mrna1.cds4;Name=ORF167;Parent=ORF167.mrna1;Target=ORF167 347 2697 +
Chr1	stalkie_big_nohaplotig	mRNA	62992702	63014410	.	-	.	ID=FBgn0015278.1.mrna1;Name=FBgn0015278.1;Parent=FBgn0015278.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=5606;mismatches=7;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	63013320	63014410	99	-	.	ID=FBgn0015278.1.mrna1.exon1;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 1 1091 +
Chr1	stalkie_big_nohaplotig	exon	63013198	63013253	100	-	.	ID=FBgn0015278.1.mrna1.exon2;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 1092 1147 +
Chr1	stalkie_big_nohaplotig	exon	63006864	63007007	100	-	.	ID=FBgn0015278.1.mrna1.exon3;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 1148 1291 +
Chr1	stalkie_big_nohaplotig	exon	63006303	63006794	100	-	.	ID=FBgn0015278.1.mrna1.exon4;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 1292 1783 +
Chr1	stalkie_big_nohaplotig	exon	63006151	63006239	100	-	.	ID=FBgn0015278.1.mrna1.exon5;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 1784 1872 +
Chr1	stalkie_big_nohaplotig	exon	63004849	63005092	98	-	.	ID=FBgn0015278.1.mrna1.exon6;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 1873 2116 +
Chr1	stalkie_big_nohaplotig	exon	63004389	63004781	100	-	.	ID=FBgn0015278.1.mrna1.exon7;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 2117 2509 +
Chr1	stalkie_big_nohaplotig	exon	63003761	63004328	100	-	.	ID=FBgn0015278.1.mrna1.exon8;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 2510 3077 +
Chr1	stalkie_big_nohaplotig	exon	63003047	63003689	99	-	.	ID=FBgn0015278.1.mrna1.exon9;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 3078 3720 +
Chr1	stalkie_big_nohaplotig	exon	63002738	63002983	100	-	.	ID=FBgn0015278.1.mrna1.exon10;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 3721 3966 +
Chr1	stalkie_big_nohaplotig	exon	63002394	63002679	99	-	.	ID=FBgn0015278.1.mrna1.exon11;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 3967 4252 +
Chr1	stalkie_big_nohaplotig	exon	63002178	63002328	99	-	.	ID=FBgn0015278.1.mrna1.exon12;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 4253 4403 +
Chr1	stalkie_big_nohaplotig	exon	63001669	63002061	100	-	.	ID=FBgn0015278.1.mrna1.exon13;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 4404 4796 +
Chr1	stalkie_big_nohaplotig	exon	63001408	63001608	100	-	.	ID=FBgn0015278.1.mrna1.exon14;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 4797 4997 +
Chr1	stalkie_big_nohaplotig	exon	62994998	62995194	100	-	.	ID=FBgn0015278.1.mrna1.exon15;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 4998 5194 +
Chr1	stalkie_big_nohaplotig	exon	62994837	62994928	100	-	.	ID=FBgn0015278.1.mrna1.exon16;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 5195 5286 +
Chr1	stalkie_big_nohaplotig	exon	62992931	62993080	100	-	.	ID=FBgn0015278.1.mrna1.exon17;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 5287 5436 +
Chr1	stalkie_big_nohaplotig	exon	62992702	62992878	100	-	.	ID=FBgn0015278.1.mrna1.exon18;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 5437 5613 +
Chr1	stalkie_big_nohaplotig	CDS	63013320	63014410	99	-	0	ID=FBgn0015278.1.mrna1.cds1;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 1 1091 +
Chr1	stalkie_big_nohaplotig	CDS	63013198	63013253	100	-	2	ID=FBgn0015278.1.mrna1.cds2;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 1092 1147 +
Chr1	stalkie_big_nohaplotig	CDS	63006864	63007007	100	-	1	ID=FBgn0015278.1.mrna1.cds3;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 1148 1291 +
Chr1	stalkie_big_nohaplotig	CDS	63006303	63006794	100	-	1	ID=FBgn0015278.1.mrna1.cds4;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 1292 1783 +
Chr1	stalkie_big_nohaplotig	CDS	63006151	63006239	100	-	1	ID=FBgn0015278.1.mrna1.cds5;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 1784 1872 +
Chr1	stalkie_big_nohaplotig	CDS	63004849	63005092	98	-	0	ID=FBgn0015278.1.mrna1.cds6;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 1873 2116 +
Chr1	stalkie_big_nohaplotig	CDS	63004389	63004781	100	-	1	ID=FBgn0015278.1.mrna1.cds7;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 2117 2509 +
Chr1	stalkie_big_nohaplotig	CDS	63003761	63004328	100	-	1	ID=FBgn0015278.1.mrna1.cds8;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 2510 3077 +
Chr1	stalkie_big_nohaplotig	CDS	63003047	63003689	99	-	2	ID=FBgn0015278.1.mrna1.cds9;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 3078 3720 +
Chr1	stalkie_big_nohaplotig	CDS	63002738	63002983	100	-	0	ID=FBgn0015278.1.mrna1.cds10;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 3721 3966 +
Chr1	stalkie_big_nohaplotig	CDS	63002394	63002679	99	-	0	ID=FBgn0015278.1.mrna1.cds11;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 3967 4252 +
Chr1	stalkie_big_nohaplotig	CDS	63002178	63002328	99	-	1	ID=FBgn0015278.1.mrna1.cds12;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 4253 4403 +
Chr1	stalkie_big_nohaplotig	CDS	63001669	63002061	100	-	2	ID=FBgn0015278.1.mrna1.cds13;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 4404 4796 +
Chr1	stalkie_big_nohaplotig	CDS	63001408	63001608	100	-	2	ID=FBgn0015278.1.mrna1.cds14;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 4797 4997 +
Chr1	stalkie_big_nohaplotig	CDS	62994998	62995194	100	-	2	ID=FBgn0015278.1.mrna1.cds15;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 4998 5194 +
Chr1	stalkie_big_nohaplotig	CDS	62994837	62994928	100	-	1	ID=FBgn0015278.1.mrna1.cds16;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 5195 5286 +
Chr1	stalkie_big_nohaplotig	CDS	62992931	62993080	100	-	0	ID=FBgn0015278.1.mrna1.cds17;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 5287 5436 +
Chr1	stalkie_big_nohaplotig	CDS	62992702	62992878	100	-	0	ID=FBgn0015278.1.mrna1.cds18;Name=FBgn0015278.1;Parent=FBgn0015278.1.mrna1;Target=FBgn0015278.1 5437 5613 +
Chr2	stalkie_big_nohaplotig	mRNA	65431689	65447742	.	-	.	ID=FBgn0034789.1.mrna1;Name=FBgn0034789.1;Parent=FBgn0034789.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=2682;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	65447601	65447742	100	-	.	ID=FBgn0034789.1.mrna1.exon1;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 1 142 +
Chr2	stalkie_big_nohaplotig	exon	65445364	65445392	100	-	.	ID=FBgn0034789.1.mrna1.exon2;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 143 171 +
Chr2	stalkie_big_nohaplotig	exon	65445157	65445309	100	-	.	ID=FBgn0034789.1.mrna1.exon3;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 172 324 +
Chr2	stalkie_big_nohaplotig	exon	65444897	65445094	100	-	.	ID=FBgn0034789.1.mrna1.exon4;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 325 522 +
Chr2	stalkie_big_nohaplotig	exon	65442814	65442956	100	-	.	ID=FBgn0034789.1.mrna1.exon5;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 523 665 +
Chr2	stalkie_big_nohaplotig	exon	65442232	65442750	99	-	.	ID=FBgn0034789.1.mrna1.exon6;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 666 1184 +
Chr2	stalkie_big_nohaplotig	exon	65442070	65442177	100	-	.	ID=FBgn0034789.1.mrna1.exon7;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 1185 1292 +
Chr2	stalkie_big_nohaplotig	exon	65441878	65442010	100	-	.	ID=FBgn0034789.1.mrna1.exon8;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 1293 1425 +
Chr2	stalkie_big_nohaplotig	exon	65439553	65439640	100	-	.	ID=FBgn0034789.1.mrna1.exon9;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 1426 1513 +
Chr2	stalkie_big_nohaplotig	exon	65435418	65435480	100	-	.	ID=FBgn0034789.1.mrna1.exon10;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 1514 1576 +
Chr2	stalkie_big_nohaplotig	exon	65434108	65434188	100	-	.	ID=FBgn0034789.1.mrna1.exon11;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 1577 1657 +
Chr2	stalkie_big_nohaplotig	exon	65431689	65432716	99	-	.	ID=FBgn0034789.1.mrna1.exon12;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 1658 2685 +
Chr2	stalkie_big_nohaplotig	CDS	65447601	65447742	100	-	0	ID=FBgn0034789.1.mrna1.cds1;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 1 142 +
Chr2	stalkie_big_nohaplotig	CDS	65445364	65445392	100	-	1	ID=FBgn0034789.1.mrna1.cds2;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 143 171 +
Chr2	stalkie_big_nohaplotig	CDS	65445157	65445309	100	-	0	ID=FBgn0034789.1.mrna1.cds3;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 172 324 +
Chr2	stalkie_big_nohaplotig	CDS	65444897	65445094	100	-	0	ID=FBgn0034789.1.mrna1.cds4;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 325 522 +
Chr2	stalkie_big_nohaplotig	CDS	65442814	65442956	100	-	0	ID=FBgn0034789.1.mrna1.cds5;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 523 665 +
Chr2	stalkie_big_nohaplotig	CDS	65442232	65442750	99	-	2	ID=FBgn0034789.1.mrna1.cds6;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 666 1184 +
Chr2	stalkie_big_nohaplotig	CDS	65442070	65442177	100	-	2	ID=FBgn0034789.1.mrna1.cds7;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 1185 1292 +
Chr2	stalkie_big_nohaplotig	CDS	65441878	65442010	100	-	2	ID=FBgn0034789.1.mrna1.cds8;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 1293 1425 +
Chr2	stalkie_big_nohaplotig	CDS	65439553	65439640	100	-	0	ID=FBgn0034789.1.mrna1.cds9;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 1426 1513 +
Chr2	stalkie_big_nohaplotig	CDS	65435418	65435480	100	-	1	ID=FBgn0034789.1.mrna1.cds10;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 1514 1576 +
Chr2	stalkie_big_nohaplotig	CDS	65434108	65434188	100	-	1	ID=FBgn0034789.1.mrna1.cds11;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 1577 1657 +
Chr2	stalkie_big_nohaplotig	CDS	65431689	65432716	99	-	1	ID=FBgn0034789.1.mrna1.cds12;Name=FBgn0034789.1;Parent=FBgn0034789.1.mrna1;Target=FBgn0034789.1 1658 2685 +
ChrX	stalkie_big_nohaplotig	mRNA	6438825	6439325	.	+	.	ID=FBgn0032642.1.mrna1;Name=FBgn0032642.1;Parent=FBgn0032642.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=378;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	6438825	6438874	100	+	.	ID=FBgn0032642.1.mrna1.exon1;Name=FBgn0032642.1;Parent=FBgn0032642.1.mrna1;Target=FBgn0032642.1 1 50 +
ChrX	stalkie_big_nohaplotig	exon	6438934	6439126	100	+	.	ID=FBgn0032642.1.mrna1.exon2;Name=FBgn0032642.1;Parent=FBgn0032642.1.mrna1;Target=FBgn0032642.1 51 243 +
ChrX	stalkie_big_nohaplotig	exon	6439191	6439325	100	+	.	ID=FBgn0032642.1.mrna1.exon3;Name=FBgn0032642.1;Parent=FBgn0032642.1.mrna1;Target=FBgn0032642.1 244 378 +
ChrX	stalkie_big_nohaplotig	CDS	6438825	6438874	100	+	0	ID=FBgn0032642.1.mrna1.cds1;Name=FBgn0032642.1;Parent=FBgn0032642.1.mrna1;Target=FBgn0032642.1 1 50 +
ChrX	stalkie_big_nohaplotig	CDS	6438934	6439126	100	+	2	ID=FBgn0032642.1.mrna1.cds2;Name=FBgn0032642.1;Parent=FBgn0032642.1.mrna1;Target=FBgn0032642.1 51 243 +
ChrX	stalkie_big_nohaplotig	CDS	6439191	6439325	100	+	0	ID=FBgn0032642.1.mrna1.cds3;Name=FBgn0032642.1;Parent=FBgn0032642.1.mrna1;Target=FBgn0032642.1 244 378 +
ChrX	stalkie_big_nohaplotig	mRNA	51701555	51702647	.	+	.	ID=ORF1670.mrna1;Name=ORF1670;Parent=ORF1670.path1;Dir=antisensecoverage=100.0;identity=99.2;matches=1024;mismatches=8;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	51701555	51702261	99	+	.	ID=ORF1670.mrna1.exon1;Name=ORF1670;Parent=ORF1670.mrna1;Target=ORF1670 326 1032 -
ChrX	stalkie_big_nohaplotig	exon	51702323	51702647	99	+	.	ID=ORF1670.mrna1.exon2;Name=ORF1670;Parent=ORF1670.mrna1;Target=ORF1670 1 325 -
ChrX	stalkie_big_nohaplotig	CDS	51702242	51702261	95	+	0	ID=ORF1670.mrna1.cds1;Name=ORF1670;Parent=ORF1670.mrna1;Target=ORF1670 326 345 .
ChrX	stalkie_big_nohaplotig	CDS	51702323	51702527	98	+	2	ID=ORF1670.mrna1.cds2;Name=ORF1670;Parent=ORF1670.mrna1;Target=ORF1670 121 325 .
ChrX	stalkie_big_nohaplotig	mRNA	51666609	51667589	.	-	.	ID=ORF1852.mrna1;Name=ORF1852;Parent=ORF1852.path1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=979;mismatches=2;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	51666609	51667589	99	-	.	ID=ORF1852.mrna1.exon1;Name=ORF1852;Parent=ORF1852.mrna1;Target=ORF1852 981 1 .
ChrX	stalkie_big_nohaplotig	CDS	51666609	51667589	99	-	0	ID=ORF1852.mrna1.cds1;Name=ORF1852;Parent=ORF1852.mrna1;Target=ORF1852 981 1 .
Chr2	stalkie_big_nohaplotig	mRNA	68925141	68926036	.	+	.	ID=FBgn0039914.mrna1;Name=FBgn0039914;Parent=FBgn0039914.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=896;mismatches=0;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	68925141	68926036	99	+	.	ID=FBgn0039914.mrna1.exon1;Name=FBgn0039914;Parent=FBgn0039914.mrna1;Target=FBgn0039914 897 1 .
Chr2	stalkie_big_nohaplotig	CDS	68925143	68925261	99	+	0	ID=FBgn0039914.mrna1.cds1;Name=FBgn0039914;Parent=FBgn0039914.mrna1;Target=FBgn0039914 122 3 .
ChrX	stalkie_big_nohaplotig	mRNA	28065586	28069052	.	+	.	ID=FBgn0032728.1.mrna2;Name=FBgn0032728.1;Parent=FBgn0032728.1.path2;Dir=sensecoverage=99.9;identity=98.9;matches=2489;mismatches=12;indels=16;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	28065586	28067607	98	+	.	ID=FBgn0032728.1.mrna2.exon1;Name=FBgn0032728.1;Parent=FBgn0032728.1.mrna2;Target=FBgn0032728.1 2 2023 +
ChrX	stalkie_big_nohaplotig	exon	28068501	28068652	100	+	.	ID=FBgn0032728.1.mrna2.exon2;Name=FBgn0032728.1;Parent=FBgn0032728.1.mrna2;Target=FBgn0032728.1 2024 2175 +
ChrX	stalkie_big_nohaplotig	exon	28068718	28069052	99	+	.	ID=FBgn0032728.1.mrna2.exon3;Name=FBgn0032728.1;Parent=FBgn0032728.1.mrna2;Target=FBgn0032728.1 2176 2510 +
ChrX	stalkie_big_nohaplotig	CDS	28065588	28067607	98	+	0	ID=FBgn0032728.1.mrna2.cds1;Name=FBgn0032728.1;Parent=FBgn0032728.1.mrna2;Target=FBgn0032728.1 4 2023 +
ChrX	stalkie_big_nohaplotig	CDS	28068501	28068652	100	+	1	ID=FBgn0032728.1.mrna2.cds2;Name=FBgn0032728.1;Parent=FBgn0032728.1.mrna2;Target=FBgn0032728.1 2024 2175 +
ChrX	stalkie_big_nohaplotig	CDS	28068718	28069050	99	+	0	ID=FBgn0032728.1.mrna2.cds3;Name=FBgn0032728.1;Parent=FBgn0032728.1.mrna2;Target=FBgn0032728.1 2176 2508 +
ChrX	stalkie_big_nohaplotig	mRNA	28805136	28805926	.	-	.	ID=ORF2868.mrna1;Name=ORF2868;Parent=ORF2868.path1;Dir=indeterminatecoverage=100.0;identity=99.1;matches=788;mismatches=3;indels=4;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	28805136	28805926	99	-	.	ID=ORF2868.mrna1.exon1;Name=ORF2868;Parent=ORF2868.mrna1;Target=ORF2868 795 1 .
ChrX	stalkie_big_nohaplotig	CDS	28805905	28805924	95	-	0	ID=ORF2868.mrna1.cds1;Name=ORF2868;Parent=ORF2868.mrna1;Target=ORF2868 23 3 .
Chr2	stalkie_big_nohaplotig	mRNA	36201147	36204393	.	-	.	ID=ORF230.mrna1;Name=ORF230;Parent=ORF230.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2327;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	36204170	36204393	100	-	.	ID=ORF230.mrna1.exon1;Name=ORF230;Parent=ORF230.mrna1;Target=ORF230 1 224 +
Chr2	stalkie_big_nohaplotig	exon	36203674	36204101	100	-	.	ID=ORF230.mrna1.exon2;Name=ORF230;Parent=ORF230.mrna1;Target=ORF230 225 652 +
Chr2	stalkie_big_nohaplotig	exon	36202272	36203597	99	-	.	ID=ORF230.mrna1.exon3;Name=ORF230;Parent=ORF230.mrna1;Target=ORF230 653 1978 +
Chr2	stalkie_big_nohaplotig	exon	36202089	36202210	100	-	.	ID=ORF230.mrna1.exon4;Name=ORF230;Parent=ORF230.mrna1;Target=ORF230 1979 2100 +
Chr2	stalkie_big_nohaplotig	exon	36201910	36202015	100	-	.	ID=ORF230.mrna1.exon5;Name=ORF230;Parent=ORF230.mrna1;Target=ORF230 2101 2206 +
Chr2	stalkie_big_nohaplotig	exon	36201147	36201268	100	-	.	ID=ORF230.mrna1.exon6;Name=ORF230;Parent=ORF230.mrna1;Target=ORF230 2207 2328 +
Chr2	stalkie_big_nohaplotig	CDS	36204170	36204393	100	-	0	ID=ORF230.mrna1.cds1;Name=ORF230;Parent=ORF230.mrna1;Target=ORF230 1 224 +
Chr2	stalkie_big_nohaplotig	CDS	36203674	36204101	100	-	2	ID=ORF230.mrna1.cds2;Name=ORF230;Parent=ORF230.mrna1;Target=ORF230 225 652 +
Chr2	stalkie_big_nohaplotig	CDS	36202272	36203597	99	-	1	ID=ORF230.mrna1.cds3;Name=ORF230;Parent=ORF230.mrna1;Target=ORF230 653 1978 +
Chr2	stalkie_big_nohaplotig	CDS	36202089	36202210	100	-	1	ID=ORF230.mrna1.cds4;Name=ORF230;Parent=ORF230.mrna1;Target=ORF230 1979 2100 +
Chr2	stalkie_big_nohaplotig	CDS	36201910	36202015	100	-	0	ID=ORF230.mrna1.cds5;Name=ORF230;Parent=ORF230.mrna1;Target=ORF230 2101 2206 +
Chr2	stalkie_big_nohaplotig	CDS	36201147	36201268	100	-	1	ID=ORF230.mrna1.cds6;Name=ORF230;Parent=ORF230.mrna1;Target=ORF230 2207 2328 +
Chr2	stalkie_big_nohaplotig	mRNA	36192747	36195283	.	-	.	ID=FBgn0035383.1.mrna1;Name=FBgn0035383.1;Parent=FBgn0035383.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=1993;mismatches=11;indels=3;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	36194940	36195283	99	-	.	ID=FBgn0035383.1.mrna1.exon1;Name=FBgn0035383.1;Parent=FBgn0035383.1.mrna1;Target=FBgn0035383.1 1 347 +
Chr2	stalkie_big_nohaplotig	exon	36194145	36194879	99	-	.	ID=FBgn0035383.1.mrna1.exon2;Name=FBgn0035383.1;Parent=FBgn0035383.1.mrna1;Target=FBgn0035383.1 348 1082 +
Chr2	stalkie_big_nohaplotig	exon	36192955	36193746	99	-	.	ID=FBgn0035383.1.mrna1.exon3;Name=FBgn0035383.1;Parent=FBgn0035383.1.mrna1;Target=FBgn0035383.1 1083 1874 +
Chr2	stalkie_big_nohaplotig	exon	36192747	36192879	100	-	.	ID=FBgn0035383.1.mrna1.exon4;Name=FBgn0035383.1;Parent=FBgn0035383.1.mrna1;Target=FBgn0035383.1 1875 2007 +
Chr2	stalkie_big_nohaplotig	CDS	36194940	36195283	99	-	0	ID=FBgn0035383.1.mrna1.cds1;Name=FBgn0035383.1;Parent=FBgn0035383.1.mrna1;Target=FBgn0035383.1 1 347 +
Chr2	stalkie_big_nohaplotig	CDS	36194145	36194879	99	-	2	ID=FBgn0035383.1.mrna1.cds2;Name=FBgn0035383.1;Parent=FBgn0035383.1.mrna1;Target=FBgn0035383.1 348 1082 +
Chr2	stalkie_big_nohaplotig	CDS	36192955	36193746	99	-	2	ID=FBgn0035383.1.mrna1.cds3;Name=FBgn0035383.1;Parent=FBgn0035383.1.mrna1;Target=FBgn0035383.1 1083 1874 +
Chr2	stalkie_big_nohaplotig	CDS	36192747	36192879	100	-	2	ID=FBgn0035383.1.mrna1.cds4;Name=FBgn0035383.1;Parent=FBgn0035383.1.mrna1;Target=FBgn0035383.1 1875 2007 +
ChrX	stalkie_big_nohaplotig	mRNA	30505901	30508223	.	-	.	ID=FBgn0010288.1.mrna1;Name=FBgn0010288.1;Parent=FBgn0010288.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=720;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	30508149	30508223	100	-	.	ID=FBgn0010288.1.mrna1.exon1;Name=FBgn0010288.1;Parent=FBgn0010288.1.mrna1;Target=FBgn0010288.1 1 75 +
ChrX	stalkie_big_nohaplotig	exon	30507888	30508028	100	-	.	ID=FBgn0010288.1.mrna1.exon2;Name=FBgn0010288.1;Parent=FBgn0010288.1.mrna1;Target=FBgn0010288.1 76 216 +
ChrX	stalkie_big_nohaplotig	exon	30507684	30507826	100	-	.	ID=FBgn0010288.1.mrna1.exon3;Name=FBgn0010288.1;Parent=FBgn0010288.1.mrna1;Target=FBgn0010288.1 217 359 +
ChrX	stalkie_big_nohaplotig	exon	30505901	30506261	100	-	.	ID=FBgn0010288.1.mrna1.exon4;Name=FBgn0010288.1;Parent=FBgn0010288.1.mrna1;Target=FBgn0010288.1 360 720 +
ChrX	stalkie_big_nohaplotig	CDS	30508149	30508223	100	-	0	ID=FBgn0010288.1.mrna1.cds1;Name=FBgn0010288.1;Parent=FBgn0010288.1.mrna1;Target=FBgn0010288.1 1 75 +
ChrX	stalkie_big_nohaplotig	CDS	30507888	30508028	100	-	0	ID=FBgn0010288.1.mrna1.cds2;Name=FBgn0010288.1;Parent=FBgn0010288.1.mrna1;Target=FBgn0010288.1 76 216 +
ChrX	stalkie_big_nohaplotig	CDS	30507684	30507826	100	-	0	ID=FBgn0010288.1.mrna1.cds3;Name=FBgn0010288.1;Parent=FBgn0010288.1.mrna1;Target=FBgn0010288.1 217 359 +
ChrX	stalkie_big_nohaplotig	CDS	30505901	30506261	100	-	2	ID=FBgn0010288.1.mrna1.cds4;Name=FBgn0010288.1;Parent=FBgn0010288.1.mrna1;Target=FBgn0010288.1 360 720 +
ChrX	stalkie_big_nohaplotig	mRNA	30450157	30466590	.	-	.	ID=FBgn0031390.1.mrna1;Name=FBgn0031390.1;Parent=FBgn0031390.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=5418;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	30466145	30466590	100	-	.	ID=FBgn0031390.1.mrna1.exon1;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 1 446 +
ChrX	stalkie_big_nohaplotig	exon	30465912	30466086	100	-	.	ID=FBgn0031390.1.mrna1.exon2;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 447 621 +
ChrX	stalkie_big_nohaplotig	exon	30465589	30465833	100	-	.	ID=FBgn0031390.1.mrna1.exon3;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 622 866 +
ChrX	stalkie_big_nohaplotig	exon	30465398	30465531	100	-	.	ID=FBgn0031390.1.mrna1.exon4;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 867 1000 +
ChrX	stalkie_big_nohaplotig	exon	30463761	30464008	100	-	.	ID=FBgn0031390.1.mrna1.exon5;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 1001 1248 +
ChrX	stalkie_big_nohaplotig	exon	30463415	30463693	100	-	.	ID=FBgn0031390.1.mrna1.exon6;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 1249 1527 +
ChrX	stalkie_big_nohaplotig	exon	30462800	30463347	100	-	.	ID=FBgn0031390.1.mrna1.exon7;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 1528 2075 +
ChrX	stalkie_big_nohaplotig	exon	30462553	30462739	100	-	.	ID=FBgn0031390.1.mrna1.exon8;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 2076 2262 +
ChrX	stalkie_big_nohaplotig	exon	30462216	30462487	100	-	.	ID=FBgn0031390.1.mrna1.exon9;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 2263 2534 +
ChrX	stalkie_big_nohaplotig	exon	30462035	30462152	100	-	.	ID=FBgn0031390.1.mrna1.exon10;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 2535 2652 +
ChrX	stalkie_big_nohaplotig	exon	30461613	30461957	100	-	.	ID=FBgn0031390.1.mrna1.exon11;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 2653 2997 +
ChrX	stalkie_big_nohaplotig	exon	30461271	30461555	100	-	.	ID=FBgn0031390.1.mrna1.exon12;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 2998 3282 +
ChrX	stalkie_big_nohaplotig	exon	30460991	30461196	100	-	.	ID=FBgn0031390.1.mrna1.exon13;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 3283 3488 +
ChrX	stalkie_big_nohaplotig	exon	30460314	30460416	100	-	.	ID=FBgn0031390.1.mrna1.exon14;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 3489 3591 +
ChrX	stalkie_big_nohaplotig	exon	30459542	30460247	100	-	.	ID=FBgn0031390.1.mrna1.exon15;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 3592 4297 +
ChrX	stalkie_big_nohaplotig	exon	30458767	30459486	100	-	.	ID=FBgn0031390.1.mrna1.exon16;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 4298 5017 +
ChrX	stalkie_big_nohaplotig	exon	30458669	30458709	100	-	.	ID=FBgn0031390.1.mrna1.exon17;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 5018 5058 +
ChrX	stalkie_big_nohaplotig	exon	30451418	30451598	100	-	.	ID=FBgn0031390.1.mrna1.exon18;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 5059 5239 +
ChrX	stalkie_big_nohaplotig	exon	30451266	30451321	100	-	.	ID=FBgn0031390.1.mrna1.exon19;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 5240 5295 +
ChrX	stalkie_big_nohaplotig	exon	30450157	30450279	100	-	.	ID=FBgn0031390.1.mrna1.exon20;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 5296 5418 +
ChrX	stalkie_big_nohaplotig	CDS	30466145	30466590	100	-	0	ID=FBgn0031390.1.mrna1.cds1;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 1 446 +
ChrX	stalkie_big_nohaplotig	CDS	30465912	30466086	100	-	2	ID=FBgn0031390.1.mrna1.cds2;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 447 621 +
ChrX	stalkie_big_nohaplotig	CDS	30465589	30465833	100	-	0	ID=FBgn0031390.1.mrna1.cds3;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 622 866 +
ChrX	stalkie_big_nohaplotig	CDS	30465398	30465531	100	-	2	ID=FBgn0031390.1.mrna1.cds4;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 867 1000 +
ChrX	stalkie_big_nohaplotig	CDS	30463761	30464008	100	-	1	ID=FBgn0031390.1.mrna1.cds5;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 1001 1248 +
ChrX	stalkie_big_nohaplotig	CDS	30463415	30463693	100	-	0	ID=FBgn0031390.1.mrna1.cds6;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 1249 1527 +
ChrX	stalkie_big_nohaplotig	CDS	30462800	30463347	100	-	0	ID=FBgn0031390.1.mrna1.cds7;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 1528 2075 +
ChrX	stalkie_big_nohaplotig	CDS	30462553	30462739	100	-	2	ID=FBgn0031390.1.mrna1.cds8;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 2076 2262 +
ChrX	stalkie_big_nohaplotig	CDS	30462216	30462487	100	-	0	ID=FBgn0031390.1.mrna1.cds9;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 2263 2534 +
ChrX	stalkie_big_nohaplotig	CDS	30462035	30462152	100	-	2	ID=FBgn0031390.1.mrna1.cds10;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 2535 2652 +
ChrX	stalkie_big_nohaplotig	CDS	30461613	30461957	100	-	0	ID=FBgn0031390.1.mrna1.cds11;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 2653 2997 +
ChrX	stalkie_big_nohaplotig	CDS	30461271	30461555	100	-	0	ID=FBgn0031390.1.mrna1.cds12;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 2998 3282 +
ChrX	stalkie_big_nohaplotig	CDS	30460991	30461196	100	-	0	ID=FBgn0031390.1.mrna1.cds13;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 3283 3488 +
ChrX	stalkie_big_nohaplotig	CDS	30460314	30460416	100	-	2	ID=FBgn0031390.1.mrna1.cds14;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 3489 3591 +
ChrX	stalkie_big_nohaplotig	CDS	30459542	30460247	100	-	0	ID=FBgn0031390.1.mrna1.cds15;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 3592 4297 +
ChrX	stalkie_big_nohaplotig	CDS	30458767	30459486	100	-	1	ID=FBgn0031390.1.mrna1.cds16;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 4298 5017 +
ChrX	stalkie_big_nohaplotig	CDS	30458669	30458709	100	-	1	ID=FBgn0031390.1.mrna1.cds17;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 5018 5058 +
ChrX	stalkie_big_nohaplotig	CDS	30451418	30451598	100	-	0	ID=FBgn0031390.1.mrna1.cds18;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 5059 5239 +
ChrX	stalkie_big_nohaplotig	CDS	30451266	30451321	100	-	1	ID=FBgn0031390.1.mrna1.cds19;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 5240 5295 +
ChrX	stalkie_big_nohaplotig	CDS	30450157	30450279	100	-	0	ID=FBgn0031390.1.mrna1.cds20;Name=FBgn0031390.1;Parent=FBgn0031390.1.mrna1;Target=FBgn0031390.1 5296 5418 +
ChrX	stalkie_big_nohaplotig	mRNA	30404387	30443125	.	+	.	ID=FBgn0032593.1.mrna1;Name=FBgn0032593.1;Parent=FBgn0032593.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3683;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	30404387	30404470	100	+	.	ID=FBgn0032593.1.mrna1.exon1;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 1 84 +
ChrX	stalkie_big_nohaplotig	exon	30417911	30417950	100	+	.	ID=FBgn0032593.1.mrna1.exon2;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 85 124 +
ChrX	stalkie_big_nohaplotig	exon	30428745	30428917	100	+	.	ID=FBgn0032593.1.mrna1.exon3;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 125 297 +
ChrX	stalkie_big_nohaplotig	exon	30429171	30429301	100	+	.	ID=FBgn0032593.1.mrna1.exon4;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 298 428 +
ChrX	stalkie_big_nohaplotig	exon	30429370	30429607	100	+	.	ID=FBgn0032593.1.mrna1.exon5;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 429 666 +
ChrX	stalkie_big_nohaplotig	exon	30430584	30430726	100	+	.	ID=FBgn0032593.1.mrna1.exon6;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 667 809 +
ChrX	stalkie_big_nohaplotig	exon	30433355	30433544	100	+	.	ID=FBgn0032593.1.mrna1.exon7;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 810 999 +
ChrX	stalkie_big_nohaplotig	exon	30433612	30433794	100	+	.	ID=FBgn0032593.1.mrna1.exon8;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 1000 1182 +
ChrX	stalkie_big_nohaplotig	exon	30434472	30434583	100	+	.	ID=FBgn0032593.1.mrna1.exon9;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 1183 1294 +
ChrX	stalkie_big_nohaplotig	exon	30434646	30434768	100	+	.	ID=FBgn0032593.1.mrna1.exon10;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 1295 1417 +
ChrX	stalkie_big_nohaplotig	exon	30435863	30436021	100	+	.	ID=FBgn0032593.1.mrna1.exon11;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 1418 1576 +
ChrX	stalkie_big_nohaplotig	exon	30436548	30436687	100	+	.	ID=FBgn0032593.1.mrna1.exon12;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 1577 1716 +
ChrX	stalkie_big_nohaplotig	exon	30436810	30437078	99	+	.	ID=FBgn0032593.1.mrna1.exon13;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 1717 1985 +
ChrX	stalkie_big_nohaplotig	exon	30437151	30437267	100	+	.	ID=FBgn0032593.1.mrna1.exon14;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 1986 2102 +
ChrX	stalkie_big_nohaplotig	exon	30438943	30439138	100	+	.	ID=FBgn0032593.1.mrna1.exon15;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 2103 2298 +
ChrX	stalkie_big_nohaplotig	exon	30439207	30439401	100	+	.	ID=FBgn0032593.1.mrna1.exon16;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 2299 2493 +
ChrX	stalkie_big_nohaplotig	exon	30439463	30439504	100	+	.	ID=FBgn0032593.1.mrna1.exon17;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 2494 2535 +
ChrX	stalkie_big_nohaplotig	exon	30439578	30439761	100	+	.	ID=FBgn0032593.1.mrna1.exon18;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 2536 2719 +
ChrX	stalkie_big_nohaplotig	exon	30441233	30441577	100	+	.	ID=FBgn0032593.1.mrna1.exon19;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 2720 3064 +
ChrX	stalkie_big_nohaplotig	exon	30441675	30441932	100	+	.	ID=FBgn0032593.1.mrna1.exon20;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 3065 3322 +
ChrX	stalkie_big_nohaplotig	exon	30442007	30442125	100	+	.	ID=FBgn0032593.1.mrna1.exon21;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 3323 3441 +
ChrX	stalkie_big_nohaplotig	exon	30442883	30443125	100	+	.	ID=FBgn0032593.1.mrna1.exon22;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 3442 3684 +
ChrX	stalkie_big_nohaplotig	CDS	30404387	30404470	100	+	0	ID=FBgn0032593.1.mrna1.cds1;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 1 84 +
ChrX	stalkie_big_nohaplotig	CDS	30417911	30417950	100	+	0	ID=FBgn0032593.1.mrna1.cds2;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 85 124 +
ChrX	stalkie_big_nohaplotig	CDS	30428745	30428917	100	+	1	ID=FBgn0032593.1.mrna1.cds3;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 125 297 +
ChrX	stalkie_big_nohaplotig	CDS	30429171	30429301	100	+	0	ID=FBgn0032593.1.mrna1.cds4;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 298 428 +
ChrX	stalkie_big_nohaplotig	CDS	30429370	30429607	100	+	2	ID=FBgn0032593.1.mrna1.cds5;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 429 666 +
ChrX	stalkie_big_nohaplotig	CDS	30430584	30430726	100	+	0	ID=FBgn0032593.1.mrna1.cds6;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 667 809 +
ChrX	stalkie_big_nohaplotig	CDS	30433355	30433544	100	+	2	ID=FBgn0032593.1.mrna1.cds7;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 810 999 +
ChrX	stalkie_big_nohaplotig	CDS	30433612	30433794	100	+	0	ID=FBgn0032593.1.mrna1.cds8;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 1000 1182 +
ChrX	stalkie_big_nohaplotig	CDS	30434472	30434583	100	+	0	ID=FBgn0032593.1.mrna1.cds9;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 1183 1294 +
ChrX	stalkie_big_nohaplotig	CDS	30434646	30434768	100	+	1	ID=FBgn0032593.1.mrna1.cds10;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 1295 1417 +
ChrX	stalkie_big_nohaplotig	CDS	30435863	30436021	100	+	1	ID=FBgn0032593.1.mrna1.cds11;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 1418 1576 +
ChrX	stalkie_big_nohaplotig	CDS	30436548	30436687	100	+	1	ID=FBgn0032593.1.mrna1.cds12;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 1577 1716 +
ChrX	stalkie_big_nohaplotig	CDS	30436810	30437078	99	+	0	ID=FBgn0032593.1.mrna1.cds13;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 1717 1985 +
ChrX	stalkie_big_nohaplotig	CDS	30437151	30437267	100	+	2	ID=FBgn0032593.1.mrna1.cds14;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 1986 2102 +
ChrX	stalkie_big_nohaplotig	CDS	30438943	30439138	100	+	2	ID=FBgn0032593.1.mrna1.cds15;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 2103 2298 +
ChrX	stalkie_big_nohaplotig	CDS	30439207	30439401	100	+	0	ID=FBgn0032593.1.mrna1.cds16;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 2299 2493 +
ChrX	stalkie_big_nohaplotig	CDS	30439463	30439504	100	+	0	ID=FBgn0032593.1.mrna1.cds17;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 2494 2535 +
ChrX	stalkie_big_nohaplotig	CDS	30439578	30439761	100	+	0	ID=FBgn0032593.1.mrna1.cds18;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 2536 2719 +
ChrX	stalkie_big_nohaplotig	CDS	30441233	30441577	100	+	1	ID=FBgn0032593.1.mrna1.cds19;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 2720 3064 +
ChrX	stalkie_big_nohaplotig	CDS	30441675	30441932	100	+	1	ID=FBgn0032593.1.mrna1.cds20;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 3065 3322 +
ChrX	stalkie_big_nohaplotig	CDS	30442007	30442125	100	+	1	ID=FBgn0032593.1.mrna1.cds21;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 3323 3441 +
ChrX	stalkie_big_nohaplotig	CDS	30442883	30443125	100	+	0	ID=FBgn0032593.1.mrna1.cds22;Name=FBgn0032593.1;Parent=FBgn0032593.1.mrna1;Target=FBgn0032593.1 3442 3684 +
ChrX	stalkie_big_nohaplotig	mRNA	30609474	30644772	.	-	.	ID=FBgn0027515.1.mrna1;Name=FBgn0027515.1;Parent=FBgn0027515.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1683;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	30644375	30644772	100	-	.	ID=FBgn0027515.1.mrna1.exon1;Name=FBgn0027515.1;Parent=FBgn0027515.1.mrna1;Target=FBgn0027515.1 1 398 +
ChrX	stalkie_big_nohaplotig	exon	30616098	30616421	100	-	.	ID=FBgn0027515.1.mrna1.exon2;Name=FBgn0027515.1;Parent=FBgn0027515.1.mrna1;Target=FBgn0027515.1 399 722 +
ChrX	stalkie_big_nohaplotig	exon	30612138	30612423	100	-	.	ID=FBgn0027515.1.mrna1.exon3;Name=FBgn0027515.1;Parent=FBgn0027515.1.mrna1;Target=FBgn0027515.1 723 1008 +
ChrX	stalkie_big_nohaplotig	exon	30611921	30612064	100	-	.	ID=FBgn0027515.1.mrna1.exon4;Name=FBgn0027515.1;Parent=FBgn0027515.1.mrna1;Target=FBgn0027515.1 1009 1152 +
ChrX	stalkie_big_nohaplotig	exon	30611668	30611840	100	-	.	ID=FBgn0027515.1.mrna1.exon5;Name=FBgn0027515.1;Parent=FBgn0027515.1.mrna1;Target=FBgn0027515.1 1153 1325 +
ChrX	stalkie_big_nohaplotig	exon	30609474	30609831	100	-	.	ID=FBgn0027515.1.mrna1.exon6;Name=FBgn0027515.1;Parent=FBgn0027515.1.mrna1;Target=FBgn0027515.1 1326 1683 +
ChrX	stalkie_big_nohaplotig	CDS	30644375	30644772	100	-	0	ID=FBgn0027515.1.mrna1.cds1;Name=FBgn0027515.1;Parent=FBgn0027515.1.mrna1;Target=FBgn0027515.1 1 398 +
ChrX	stalkie_big_nohaplotig	CDS	30616098	30616421	100	-	2	ID=FBgn0027515.1.mrna1.cds2;Name=FBgn0027515.1;Parent=FBgn0027515.1.mrna1;Target=FBgn0027515.1 399 722 +
ChrX	stalkie_big_nohaplotig	CDS	30612138	30612423	100	-	2	ID=FBgn0027515.1.mrna1.cds3;Name=FBgn0027515.1;Parent=FBgn0027515.1.mrna1;Target=FBgn0027515.1 723 1008 +
ChrX	stalkie_big_nohaplotig	CDS	30611921	30612064	100	-	0	ID=FBgn0027515.1.mrna1.cds4;Name=FBgn0027515.1;Parent=FBgn0027515.1.mrna1;Target=FBgn0027515.1 1009 1152 +
ChrX	stalkie_big_nohaplotig	CDS	30611668	30611840	100	-	0	ID=FBgn0027515.1.mrna1.cds5;Name=FBgn0027515.1;Parent=FBgn0027515.1.mrna1;Target=FBgn0027515.1 1153 1325 +
ChrX	stalkie_big_nohaplotig	CDS	30609474	30609831	100	-	2	ID=FBgn0027515.1.mrna1.cds6;Name=FBgn0027515.1;Parent=FBgn0027515.1.mrna1;Target=FBgn0027515.1 1326 1683 +
ChrX	stalkie_big_nohaplotig	mRNA	30531836	30536217	.	+	.	ID=FBgn0031401.1.mrna1;Name=FBgn0031401.1;Parent=FBgn0031401.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1734;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	30531836	30532158	100	+	.	ID=FBgn0031401.1.mrna1.exon1;Name=FBgn0031401.1;Parent=FBgn0031401.1.mrna1;Target=FBgn0031401.1 1 323 +
ChrX	stalkie_big_nohaplotig	exon	30532236	30532515	100	+	.	ID=FBgn0031401.1.mrna1.exon2;Name=FBgn0031401.1;Parent=FBgn0031401.1.mrna1;Target=FBgn0031401.1 324 603 +
ChrX	stalkie_big_nohaplotig	exon	30533743	30534296	100	+	.	ID=FBgn0031401.1.mrna1.exon3;Name=FBgn0031401.1;Parent=FBgn0031401.1.mrna1;Target=FBgn0031401.1 604 1157 +
ChrX	stalkie_big_nohaplotig	exon	30534354	30534460	100	+	.	ID=FBgn0031401.1.mrna1.exon4;Name=FBgn0031401.1;Parent=FBgn0031401.1.mrna1;Target=FBgn0031401.1 1158 1264 +
ChrX	stalkie_big_nohaplotig	exon	30535671	30535799	100	+	.	ID=FBgn0031401.1.mrna1.exon5;Name=FBgn0031401.1;Parent=FBgn0031401.1.mrna1;Target=FBgn0031401.1 1265 1393 +
ChrX	stalkie_big_nohaplotig	exon	30535877	30536217	100	+	.	ID=FBgn0031401.1.mrna1.exon6;Name=FBgn0031401.1;Parent=FBgn0031401.1.mrna1;Target=FBgn0031401.1 1394 1734 +
ChrX	stalkie_big_nohaplotig	CDS	30531836	30532158	100	+	0	ID=FBgn0031401.1.mrna1.cds1;Name=FBgn0031401.1;Parent=FBgn0031401.1.mrna1;Target=FBgn0031401.1 1 323 +
ChrX	stalkie_big_nohaplotig	CDS	30532236	30532515	100	+	2	ID=FBgn0031401.1.mrna1.cds2;Name=FBgn0031401.1;Parent=FBgn0031401.1.mrna1;Target=FBgn0031401.1 324 603 +
ChrX	stalkie_big_nohaplotig	CDS	30533743	30534296	100	+	0	ID=FBgn0031401.1.mrna1.cds3;Name=FBgn0031401.1;Parent=FBgn0031401.1.mrna1;Target=FBgn0031401.1 604 1157 +
ChrX	stalkie_big_nohaplotig	CDS	30534354	30534460	100	+	2	ID=FBgn0031401.1.mrna1.cds4;Name=FBgn0031401.1;Parent=FBgn0031401.1.mrna1;Target=FBgn0031401.1 1158 1264 +
ChrX	stalkie_big_nohaplotig	CDS	30535671	30535799	100	+	1	ID=FBgn0031401.1.mrna1.cds5;Name=FBgn0031401.1;Parent=FBgn0031401.1.mrna1;Target=FBgn0031401.1 1265 1393 +
ChrX	stalkie_big_nohaplotig	CDS	30535877	30536217	100	+	1	ID=FBgn0031401.1.mrna1.cds6;Name=FBgn0031401.1;Parent=FBgn0031401.1.mrna1;Target=FBgn0031401.1 1394 1734 +
Chr1	stalkie_big_nohaplotig	mRNA	49076542	49077839	.	-	.	ID=FBgn0052447.1.mrna1;Name=FBgn0052447.1;Parent=FBgn0052447.1.path1;Dir=indeterminatecoverage=99.9;identity=99.9;matches=1297;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	49076542	49077839	99	-	.	ID=FBgn0052447.1.mrna1.exon1;Name=FBgn0052447.1;Parent=FBgn0052447.1.mrna1;Target=FBgn0052447.1 1298 1 .
Chr1	stalkie_big_nohaplotig	CDS	49076544	49077839	99	-	0	ID=FBgn0052447.1.mrna1.cds1;Name=FBgn0052447.1;Parent=FBgn0052447.1.mrna1;Target=FBgn0052447.1 1296 1 .
Chr1	stalkie_big_nohaplotig	mRNA	49181945	49182747	.	+	.	ID=ORF2800.mrna1;Name=ORF2800;Parent=ORF2800.path1;Dir=indeterminatecoverage=99.9;identity=96.4;matches=774;mismatches=29;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	49181945	49182747	96	+	.	ID=ORF2800.mrna1.exon1;Name=ORF2800;Parent=ORF2800.mrna1;Target=ORF2800 803 1 .
Chr1	stalkie_big_nohaplotig	CDS	49181945	49182745	96	+	0	ID=ORF2800.mrna1.cds1;Name=ORF2800;Parent=ORF2800.mrna1;Target=ORF2800 801 1 .
Chr1	stalkie_big_nohaplotig	mRNA	49182530	49183168	.	+	.	ID=FBgn0039711.1.mrna1;Name=FBgn0039711.1;Parent=FBgn0039711.1.path1;Dir=indeterminatecoverage=100.0;identity=97.3;matches=622;mismatches=17;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	49182530	49183168	97	+	.	ID=FBgn0039711.1.mrna1.exon1;Name=FBgn0039711.1;Parent=FBgn0039711.1.mrna1;Target=FBgn0039711.1 639 1 .
Chr1	stalkie_big_nohaplotig	CDS	49182530	49183168	97	+	0	ID=FBgn0039711.1.mrna1.cds1;Name=FBgn0039711.1;Parent=FBgn0039711.1.mrna1;Target=FBgn0039711.1 639 1 .
Chr1	stalkie_big_nohaplotig	mRNA	49403274	49404674	.	-	.	ID=FBgn0003884.5.mrna1;Name=FBgn0003884.5;Parent=FBgn0003884.5.path1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1396;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	49403274	49404674	99	-	.	ID=FBgn0003884.5.mrna1.exon1;Name=FBgn0003884.5;Parent=FBgn0003884.5.mrna1;Target=FBgn0003884.5 1401 1 .
Chr1	stalkie_big_nohaplotig	CDS	49403274	49404674	99	-	0	ID=FBgn0003884.5.mrna1.cds1;Name=FBgn0003884.5;Parent=FBgn0003884.5.mrna1;Target=FBgn0003884.5 1401 1 .
Chr1	stalkie_big_nohaplotig	mRNA	49414661	49416565	.	+	.	ID=FBgn0053140.1.mrna1;Name=FBgn0053140.1;Parent=FBgn0053140.1.path1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1902;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	49414661	49416565	99	+	.	ID=FBgn0053140.1.mrna1.exon1;Name=FBgn0053140.1;Parent=FBgn0053140.1.mrna1;Target=FBgn0053140.1 1905 1 .
Chr1	stalkie_big_nohaplotig	CDS	49414661	49416565	99	+	0	ID=FBgn0053140.1.mrna1.cds1;Name=FBgn0053140.1;Parent=FBgn0053140.1.mrna1;Target=FBgn0053140.1 1905 1 .
Chr1	stalkie_big_nohaplotig	mRNA	15683808	15698618	.	-	.	ID=FBgn0035121.1.mrna1;Name=FBgn0035121.1;Parent=FBgn0035121.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2826;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	15698472	15698618	100	-	.	ID=FBgn0035121.1.mrna1.exon1;Name=FBgn0035121.1;Parent=FBgn0035121.1.mrna1;Target=FBgn0035121.1 1 147 +
Chr1	stalkie_big_nohaplotig	exon	15686924	15687758	100	-	.	ID=FBgn0035121.1.mrna1.exon2;Name=FBgn0035121.1;Parent=FBgn0035121.1.mrna1;Target=FBgn0035121.1 148 982 +
Chr1	stalkie_big_nohaplotig	exon	15684632	15686064	100	-	.	ID=FBgn0035121.1.mrna1.exon3;Name=FBgn0035121.1;Parent=FBgn0035121.1.mrna1;Target=FBgn0035121.1 983 2415 +
Chr1	stalkie_big_nohaplotig	exon	15683808	15684218	100	-	.	ID=FBgn0035121.1.mrna1.exon4;Name=FBgn0035121.1;Parent=FBgn0035121.1.mrna1;Target=FBgn0035121.1 2416 2826 +
Chr1	stalkie_big_nohaplotig	CDS	15698472	15698618	100	-	0	ID=FBgn0035121.1.mrna1.cds1;Name=FBgn0035121.1;Parent=FBgn0035121.1.mrna1;Target=FBgn0035121.1 1 147 +
Chr1	stalkie_big_nohaplotig	CDS	15686924	15687758	100	-	0	ID=FBgn0035121.1.mrna1.cds2;Name=FBgn0035121.1;Parent=FBgn0035121.1.mrna1;Target=FBgn0035121.1 148 982 +
Chr1	stalkie_big_nohaplotig	CDS	15684632	15686064	100	-	1	ID=FBgn0035121.1.mrna1.cds3;Name=FBgn0035121.1;Parent=FBgn0035121.1.mrna1;Target=FBgn0035121.1 983 2415 +
Chr1	stalkie_big_nohaplotig	CDS	15683808	15684218	100	-	0	ID=FBgn0035121.1.mrna1.cds4;Name=FBgn0035121.1;Parent=FBgn0035121.1.mrna1;Target=FBgn0035121.1 2416 2826 +
Chr2	stalkie_big_nohaplotig	mRNA	109011850	109064849	.	+	.	ID=FBgn0027608.1.mrna1;Name=FBgn0027608.1;Parent=FBgn0027608.1.path1;Dir=sensecoverage=99.8;identity=100.0;matches=1106;mismatches=0;indels=0;unknowns=2
Chr2	stalkie_big_nohaplotig	exon	109011850	109011925	100	+	.	ID=FBgn0027608.1.mrna1.exon1;Name=FBgn0027608.1;Parent=FBgn0027608.1.mrna1;Target=FBgn0027608.1 3 78 +
Chr2	stalkie_big_nohaplotig	exon	109056442	109056492	100	+	.	ID=FBgn0027608.1.mrna1.exon2;Name=FBgn0027608.1;Parent=FBgn0027608.1.mrna1;Target=FBgn0027608.1 79 129 +
Chr2	stalkie_big_nohaplotig	exon	109056591	109056654	100	+	.	ID=FBgn0027608.1.mrna1.exon3;Name=FBgn0027608.1;Parent=FBgn0027608.1.mrna1;Target=FBgn0027608.1 130 193 +
Chr2	stalkie_big_nohaplotig	exon	109057968	109058085	100	+	.	ID=FBgn0027608.1.mrna1.exon4;Name=FBgn0027608.1;Parent=FBgn0027608.1.mrna1;Target=FBgn0027608.1 194 311 +
Chr2	stalkie_big_nohaplotig	exon	109058155	109058365	100	+	.	ID=FBgn0027608.1.mrna1.exon5;Name=FBgn0027608.1;Parent=FBgn0027608.1.mrna1;Target=FBgn0027608.1 312 522 +
Chr2	stalkie_big_nohaplotig	exon	109058440	109058511	100	+	.	ID=FBgn0027608.1.mrna1.exon6;Name=FBgn0027608.1;Parent=FBgn0027608.1.mrna1;Target=FBgn0027608.1 523 594 +
Chr2	stalkie_big_nohaplotig	exon	109058799	109058807	100	+	.	ID=FBgn0027608.1.mrna1.exon7;Name=FBgn0027608.1;Parent=FBgn0027608.1.mrna1;Target=FBgn0027608.1 595 603 +
Chr2	stalkie_big_nohaplotig	exon	109064188	109064300	100	+	.	ID=FBgn0027608.1.mrna1.exon8;Name=FBgn0027608.1;Parent=FBgn0027608.1.mrna1;Target=FBgn0027608.1 604 716 +
Chr2	stalkie_big_nohaplotig	exon	109064373	109064535	100	+	.	ID=FBgn0027608.1.mrna1.exon9;Name=FBgn0027608.1;Parent=FBgn0027608.1.mrna1;Target=FBgn0027608.1 717 879 +
Chr2	stalkie_big_nohaplotig	exon	109064619	109064849	100	+	.	ID=FBgn0027608.1.mrna1.exon10;Name=FBgn0027608.1;Parent=FBgn0027608.1.mrna1;Target=FBgn0027608.1 880 1110 +
Chr2	stalkie_big_nohaplotig	CDS	109011851	109011925	100	+	0	ID=FBgn0027608.1.mrna1.cds1;Name=FBgn0027608.1;Parent=FBgn0027608.1.mrna1;Target=FBgn0027608.1 4 78 +
Chr2	stalkie_big_nohaplotig	CDS	109056442	109056492	100	+	0	ID=FBgn0027608.1.mrna1.cds2;Name=FBgn0027608.1;Parent=FBgn0027608.1.mrna1;Target=FBgn0027608.1 79 129 +
Chr2	stalkie_big_nohaplotig	CDS	109056591	109056654	100	+	0	ID=FBgn0027608.1.mrna1.cds3;Name=FBgn0027608.1;Parent=FBgn0027608.1.mrna1;Target=FBgn0027608.1 130 193 +
Chr2	stalkie_big_nohaplotig	CDS	109057968	109058085	100	+	1	ID=FBgn0027608.1.mrna1.cds4;Name=FBgn0027608.1;Parent=FBgn0027608.1.mrna1;Target=FBgn0027608.1 194 311 +
Chr2	stalkie_big_nohaplotig	CDS	109058155	109058365	100	+	2	ID=FBgn0027608.1.mrna1.cds5;Name=FBgn0027608.1;Parent=FBgn0027608.1.mrna1;Target=FBgn0027608.1 312 522 +
Chr2	stalkie_big_nohaplotig	CDS	109058440	109058511	100	+	0	ID=FBgn0027608.1.mrna1.cds6;Name=FBgn0027608.1;Parent=FBgn0027608.1.mrna1;Target=FBgn0027608.1 523 594 +
Chr2	stalkie_big_nohaplotig	CDS	109058799	109058807	100	+	0	ID=FBgn0027608.1.mrna1.cds7;Name=FBgn0027608.1;Parent=FBgn0027608.1.mrna1;Target=FBgn0027608.1 595 603 +
Chr2	stalkie_big_nohaplotig	CDS	109064188	109064300	100	+	0	ID=FBgn0027608.1.mrna1.cds8;Name=FBgn0027608.1;Parent=FBgn0027608.1.mrna1;Target=FBgn0027608.1 604 716 +
Chr2	stalkie_big_nohaplotig	CDS	109064373	109064535	100	+	2	ID=FBgn0027608.1.mrna1.cds9;Name=FBgn0027608.1;Parent=FBgn0027608.1.mrna1;Target=FBgn0027608.1 717 879 +
Chr2	stalkie_big_nohaplotig	CDS	109064619	109064849	100	+	0	ID=FBgn0027608.1.mrna1.cds10;Name=FBgn0027608.1;Parent=FBgn0027608.1.mrna1;Target=FBgn0027608.1 880 1110 +
Chr2	stalkie_big_nohaplotig	mRNA	32348031	32350490	.	+	.	ID=FBgn0039349.1.mrna1;Name=FBgn0039349.1;Parent=FBgn0039349.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1530;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	32348031	32348330	100	+	.	ID=FBgn0039349.1.mrna1.exon1;Name=FBgn0039349.1;Parent=FBgn0039349.1.mrna1;Target=FBgn0039349.1 1 300 +
Chr2	stalkie_big_nohaplotig	exon	32348404	32348692	100	+	.	ID=FBgn0039349.1.mrna1.exon2;Name=FBgn0039349.1;Parent=FBgn0039349.1.mrna1;Target=FBgn0039349.1 301 589 +
Chr2	stalkie_big_nohaplotig	exon	32348761	32348850	100	+	.	ID=FBgn0039349.1.mrna1.exon3;Name=FBgn0039349.1;Parent=FBgn0039349.1.mrna1;Target=FBgn0039349.1 590 679 +
Chr2	stalkie_big_nohaplotig	exon	32349640	32350490	100	+	.	ID=FBgn0039349.1.mrna1.exon4;Name=FBgn0039349.1;Parent=FBgn0039349.1.mrna1;Target=FBgn0039349.1 680 1530 +
Chr2	stalkie_big_nohaplotig	CDS	32348031	32348330	100	+	0	ID=FBgn0039349.1.mrna1.cds1;Name=FBgn0039349.1;Parent=FBgn0039349.1.mrna1;Target=FBgn0039349.1 1 300 +
Chr2	stalkie_big_nohaplotig	CDS	32348404	32348692	100	+	0	ID=FBgn0039349.1.mrna1.cds2;Name=FBgn0039349.1;Parent=FBgn0039349.1.mrna1;Target=FBgn0039349.1 301 589 +
Chr2	stalkie_big_nohaplotig	CDS	32348761	32348850	100	+	1	ID=FBgn0039349.1.mrna1.cds3;Name=FBgn0039349.1;Parent=FBgn0039349.1.mrna1;Target=FBgn0039349.1 590 679 +
Chr2	stalkie_big_nohaplotig	CDS	32349640	32350490	100	+	1	ID=FBgn0039349.1.mrna1.cds4;Name=FBgn0039349.1;Parent=FBgn0039349.1.mrna1;Target=FBgn0039349.1 680 1530 +
ChrX	stalkie_big_nohaplotig	mRNA	18623436	18624224	.	+	.	ID=ORF2910.mrna1;Name=ORF2910;Parent=ORF2910.path1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=786;mismatches=3;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	18623436	18624224	99	+	.	ID=ORF2910.mrna1.exon1;Name=ORF2910;Parent=ORF2910.mrna1;Target=ORF2910 789 1 .
ChrX	stalkie_big_nohaplotig	CDS	18623436	18624224	99	+	0	ID=ORF2910.mrna1.cds1;Name=ORF2910;Parent=ORF2910.mrna1;Target=ORF2910 789 1 .
Chr1	stalkie_big_nohaplotig	mRNA	124403578	124407095	.	-	.	ID=FBgn0030208.1.mrna1;Name=FBgn0030208.1;Parent=FBgn0030208.1.path1;Dir=sensecoverage=100.0;identity=99.1;matches=2000;mismatches=16;indels=3;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	124406843	124407095	100	-	.	ID=FBgn0030208.1.mrna1.exon1;Name=FBgn0030208.1;Parent=FBgn0030208.1.mrna1;Target=FBgn0030208.1 1 253 +
Chr1	stalkie_big_nohaplotig	exon	124405248	124405436	99	-	.	ID=FBgn0030208.1.mrna1.exon2;Name=FBgn0030208.1;Parent=FBgn0030208.1.mrna1;Target=FBgn0030208.1 254 442 +
Chr1	stalkie_big_nohaplotig	exon	124403578	124405151	98	-	.	ID=FBgn0030208.1.mrna1.exon3;Name=FBgn0030208.1;Parent=FBgn0030208.1.mrna1;Target=FBgn0030208.1 443 2019 +
Chr1	stalkie_big_nohaplotig	CDS	124406843	124407095	100	-	0	ID=FBgn0030208.1.mrna1.cds1;Name=FBgn0030208.1;Parent=FBgn0030208.1.mrna1;Target=FBgn0030208.1 1 253 +
Chr1	stalkie_big_nohaplotig	CDS	124405248	124405436	99	-	1	ID=FBgn0030208.1.mrna1.cds2;Name=FBgn0030208.1;Parent=FBgn0030208.1.mrna1;Target=FBgn0030208.1 254 442 +
Chr1	stalkie_big_nohaplotig	CDS	124403578	124405151	98	-	1	ID=FBgn0030208.1.mrna1.cds3;Name=FBgn0030208.1;Parent=FBgn0030208.1.mrna1;Target=FBgn0030208.1 443 2019 +
Chr1	stalkie_big_nohaplotig	mRNA	32619744	32620736	.	-	.	ID=ORF2633.mrna1;Name=ORF2633;Parent=ORF2633.path1;Dir=sensecoverage=99.4;identity=97.8;matches=808;mismatches=15;indels=3;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	32620665	32620736	100	-	.	ID=ORF2633.mrna1.exon1;Name=ORF2633;Parent=ORF2633.mrna1;Target=ORF2633 1 72 +
Chr1	stalkie_big_nohaplotig	exon	32620504	32620609	97	-	.	ID=ORF2633.mrna1.exon2;Name=ORF2633;Parent=ORF2633.mrna1;Target=ORF2633 73 178 +
Chr1	stalkie_big_nohaplotig	exon	32620135	32620445	99	-	.	ID=ORF2633.mrna1.exon3;Name=ORF2633;Parent=ORF2633.mrna1;Target=ORF2633 179 489 +
Chr1	stalkie_big_nohaplotig	exon	32619744	32620077	95	-	.	ID=ORF2633.mrna1.exon4;Name=ORF2633;Parent=ORF2633.mrna1;Target=ORF2633 490 826 +
Chr1	stalkie_big_nohaplotig	CDS	32620665	32620736	100	-	0	ID=ORF2633.mrna1.cds1;Name=ORF2633;Parent=ORF2633.mrna1;Target=ORF2633 1 72 +
Chr1	stalkie_big_nohaplotig	CDS	32620504	32620609	97	-	0	ID=ORF2633.mrna1.cds2;Name=ORF2633;Parent=ORF2633.mrna1;Target=ORF2633 73 178 +
Chr1	stalkie_big_nohaplotig	CDS	32620135	32620445	99	-	1	ID=ORF2633.mrna1.cds3;Name=ORF2633;Parent=ORF2633.mrna1;Target=ORF2633 179 489 +
Chr1	stalkie_big_nohaplotig	CDS	32619745	32620077	95	-	0	ID=ORF2633.mrna1.cds4;Name=ORF2633;Parent=ORF2633.mrna1;Target=ORF2633 490 825 +
Chr1	stalkie_big_nohaplotig	mRNA	135444530	135446613	.	-	.	ID=FBgn0030361.1.mrna1;Name=FBgn0030361.1;Parent=FBgn0030361.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1834;mismatches=8;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	135446478	135446613	100	-	.	ID=FBgn0030361.1.mrna1.exon1;Name=FBgn0030361.1;Parent=FBgn0030361.1.mrna1;Target=FBgn0030361.1 1 136 +
Chr1	stalkie_big_nohaplotig	exon	135446265	135446424	98	-	.	ID=FBgn0030361.1.mrna1.exon2;Name=FBgn0030361.1;Parent=FBgn0030361.1.mrna1;Target=FBgn0030361.1 137 296 +
Chr1	stalkie_big_nohaplotig	exon	135445355	135446201	99	-	.	ID=FBgn0030361.1.mrna1.exon3;Name=FBgn0030361.1;Parent=FBgn0030361.1.mrna1;Target=FBgn0030361.1 297 1143 +
Chr1	stalkie_big_nohaplotig	exon	135445101	135445297	100	-	.	ID=FBgn0030361.1.mrna1.exon4;Name=FBgn0030361.1;Parent=FBgn0030361.1.mrna1;Target=FBgn0030361.1 1144 1340 +
Chr1	stalkie_big_nohaplotig	exon	135444530	135445031	100	-	.	ID=FBgn0030361.1.mrna1.exon5;Name=FBgn0030361.1;Parent=FBgn0030361.1.mrna1;Target=FBgn0030361.1 1341 1842 +
Chr1	stalkie_big_nohaplotig	CDS	135446478	135446613	100	-	0	ID=FBgn0030361.1.mrna1.cds1;Name=FBgn0030361.1;Parent=FBgn0030361.1.mrna1;Target=FBgn0030361.1 1 136 +
Chr1	stalkie_big_nohaplotig	CDS	135446265	135446424	98	-	1	ID=FBgn0030361.1.mrna1.cds2;Name=FBgn0030361.1;Parent=FBgn0030361.1.mrna1;Target=FBgn0030361.1 137 296 +
Chr1	stalkie_big_nohaplotig	CDS	135445355	135446201	99	-	2	ID=FBgn0030361.1.mrna1.cds3;Name=FBgn0030361.1;Parent=FBgn0030361.1.mrna1;Target=FBgn0030361.1 297 1143 +
Chr1	stalkie_big_nohaplotig	CDS	135445101	135445297	100	-	0	ID=FBgn0030361.1.mrna1.cds4;Name=FBgn0030361.1;Parent=FBgn0030361.1.mrna1;Target=FBgn0030361.1 1144 1340 +
Chr1	stalkie_big_nohaplotig	CDS	135444530	135445031	100	-	2	ID=FBgn0030361.1.mrna1.cds5;Name=FBgn0030361.1;Parent=FBgn0030361.1.mrna1;Target=FBgn0030361.1 1341 1842 +
Chr1	stalkie_big_nohaplotig	mRNA	135713320	135714923	.	+	.	ID=ORF2863.mrna1;Name=ORF2863;Parent=ORF2863.path1;Dir=sensecoverage=100.0;identity=97.0;matches=774;mismatches=21;indels=3;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	135713320	135713482	100	+	.	ID=ORF2863.mrna1.exon1;Name=ORF2863;Parent=ORF2863.mrna1;Target=ORF2863 1 163 +
Chr1	stalkie_big_nohaplotig	exon	135714289	135714923	96	+	.	ID=ORF2863.mrna1.exon2;Name=ORF2863;Parent=ORF2863.mrna1;Target=ORF2863 164 795 +
Chr1	stalkie_big_nohaplotig	CDS	135713320	135713482	100	+	0	ID=ORF2863.mrna1.cds1;Name=ORF2863;Parent=ORF2863.mrna1;Target=ORF2863 1 163 +
Chr1	stalkie_big_nohaplotig	CDS	135714289	135714923	96	+	1	ID=ORF2863.mrna1.cds2;Name=ORF2863;Parent=ORF2863.mrna1;Target=ORF2863 164 795 +
Chr1	stalkie_big_nohaplotig	mRNA	135719592	135721730	.	-	.	ID=FBgn0029666.1.mrna1;Name=FBgn0029666.1;Parent=FBgn0029666.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=1326;mismatches=5;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	135721509	135721730	98	-	.	ID=FBgn0029666.1.mrna1.exon1;Name=FBgn0029666.1;Parent=FBgn0029666.1.mrna1;Target=FBgn0029666.1 1 222 +
Chr1	stalkie_big_nohaplotig	exon	135720716	135721441	99	-	.	ID=FBgn0029666.1.mrna1.exon2;Name=FBgn0029666.1;Parent=FBgn0029666.1.mrna1;Target=FBgn0029666.1 223 948 +
Chr1	stalkie_big_nohaplotig	exon	135719973	135720102	100	-	.	ID=FBgn0029666.1.mrna1.exon3;Name=FBgn0029666.1;Parent=FBgn0029666.1.mrna1;Target=FBgn0029666.1 949 1078 +
Chr1	stalkie_big_nohaplotig	exon	135719721	135719908	100	-	.	ID=FBgn0029666.1.mrna1.exon4;Name=FBgn0029666.1;Parent=FBgn0029666.1.mrna1;Target=FBgn0029666.1 1079 1266 +
Chr1	stalkie_big_nohaplotig	exon	135719592	135719656	98	-	.	ID=FBgn0029666.1.mrna1.exon5;Name=FBgn0029666.1;Parent=FBgn0029666.1.mrna1;Target=FBgn0029666.1 1267 1332 +
Chr1	stalkie_big_nohaplotig	CDS	135721509	135721730	98	-	0	ID=FBgn0029666.1.mrna1.cds1;Name=FBgn0029666.1;Parent=FBgn0029666.1.mrna1;Target=FBgn0029666.1 1 222 +
Chr1	stalkie_big_nohaplotig	CDS	135720716	135721441	99	-	0	ID=FBgn0029666.1.mrna1.cds2;Name=FBgn0029666.1;Parent=FBgn0029666.1.mrna1;Target=FBgn0029666.1 223 948 +
Chr1	stalkie_big_nohaplotig	CDS	135719973	135720102	100	-	0	ID=FBgn0029666.1.mrna1.cds3;Name=FBgn0029666.1;Parent=FBgn0029666.1.mrna1;Target=FBgn0029666.1 949 1078 +
Chr1	stalkie_big_nohaplotig	CDS	135719721	135719908	100	-	1	ID=FBgn0029666.1.mrna1.cds4;Name=FBgn0029666.1;Parent=FBgn0029666.1.mrna1;Target=FBgn0029666.1 1079 1266 +
Chr1	stalkie_big_nohaplotig	CDS	135719592	135719656	98	-	0	ID=FBgn0029666.1.mrna1.cds5;Name=FBgn0029666.1;Parent=FBgn0029666.1.mrna1;Target=FBgn0029666.1 1267 1332 +
ChrX	stalkie_big_nohaplotig	mRNA	43523785	43526391	.	+	.	ID=ORF196.mrna1;Name=ORF196;Parent=ORF196.path1;Dir=indeterminatecoverage=100.0;identity=98.0;matches=2556;mismatches=3;indels=48;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	43523785	43526391	98	+	.	ID=ORF196.mrna1.exon1;Name=ORF196;Parent=ORF196.mrna1;Target=ORF196 2559 1 .
ChrX	stalkie_big_nohaplotig	CDS	43523785	43526391	98	+	0	ID=ORF196.mrna1.cds1;Name=ORF196;Parent=ORF196.mrna1;Target=ORF196 2559 1 .
ChrX	stalkie_big_nohaplotig	mRNA	43313337	43316378	.	+	.	ID=ORF2315.mrna1;Name=ORF2315;Parent=ORF2315.path1;Dir=sensecoverage=100.0;identity=99.4;matches=874;mismatches=5;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	43313337	43313378	100	+	.	ID=ORF2315.mrna1.exon1;Name=ORF2315;Parent=ORF2315.mrna1;Target=ORF2315 1 42 +
ChrX	stalkie_big_nohaplotig	exon	43315542	43316378	99	+	.	ID=ORF2315.mrna1.exon2;Name=ORF2315;Parent=ORF2315.mrna1;Target=ORF2315 43 879 +
ChrX	stalkie_big_nohaplotig	CDS	43313337	43313378	100	+	0	ID=ORF2315.mrna1.cds1;Name=ORF2315;Parent=ORF2315.mrna1;Target=ORF2315 1 42 +
ChrX	stalkie_big_nohaplotig	CDS	43315542	43316378	99	+	0	ID=ORF2315.mrna1.cds2;Name=ORF2315;Parent=ORF2315.mrna1;Target=ORF2315 43 879 +
Chr1	stalkie_big_nohaplotig	mRNA	164621562	164623323	.	+	.	ID=FBgn0030330.1.mrna1;Name=FBgn0030330.1;Parent=FBgn0030330.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1514;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	164621562	164621660	100	+	.	ID=FBgn0030330.1.mrna1.exon1;Name=FBgn0030330.1;Parent=FBgn0030330.1.mrna1;Target=FBgn0030330.1 1 99 +
Chr1	stalkie_big_nohaplotig	exon	164621723	164622043	100	+	.	ID=FBgn0030330.1.mrna1.exon2;Name=FBgn0030330.1;Parent=FBgn0030330.1.mrna1;Target=FBgn0030330.1 100 420 +
Chr1	stalkie_big_nohaplotig	exon	164622095	164622776	99	+	.	ID=FBgn0030330.1.mrna1.exon3;Name=FBgn0030330.1;Parent=FBgn0030330.1.mrna1;Target=FBgn0030330.1 421 1102 +
Chr1	stalkie_big_nohaplotig	exon	164622843	164623000	100	+	.	ID=FBgn0030330.1.mrna1.exon4;Name=FBgn0030330.1;Parent=FBgn0030330.1.mrna1;Target=FBgn0030330.1 1103 1260 +
Chr1	stalkie_big_nohaplotig	exon	164623069	164623323	100	+	.	ID=FBgn0030330.1.mrna1.exon5;Name=FBgn0030330.1;Parent=FBgn0030330.1.mrna1;Target=FBgn0030330.1 1261 1515 +
Chr1	stalkie_big_nohaplotig	CDS	164621562	164621660	100	+	0	ID=FBgn0030330.1.mrna1.cds1;Name=FBgn0030330.1;Parent=FBgn0030330.1.mrna1;Target=FBgn0030330.1 1 99 +
Chr1	stalkie_big_nohaplotig	CDS	164621723	164622043	100	+	0	ID=FBgn0030330.1.mrna1.cds2;Name=FBgn0030330.1;Parent=FBgn0030330.1.mrna1;Target=FBgn0030330.1 100 420 +
Chr1	stalkie_big_nohaplotig	CDS	164622095	164622776	99	+	0	ID=FBgn0030330.1.mrna1.cds3;Name=FBgn0030330.1;Parent=FBgn0030330.1.mrna1;Target=FBgn0030330.1 421 1102 +
Chr1	stalkie_big_nohaplotig	CDS	164622843	164623000	100	+	1	ID=FBgn0030330.1.mrna1.cds4;Name=FBgn0030330.1;Parent=FBgn0030330.1.mrna1;Target=FBgn0030330.1 1103 1260 +
Chr1	stalkie_big_nohaplotig	CDS	164623069	164623323	100	+	0	ID=FBgn0030330.1.mrna1.cds5;Name=FBgn0030330.1;Parent=FBgn0030330.1.mrna1;Target=FBgn0030330.1 1261 1515 +
Chr1	stalkie_big_nohaplotig	mRNA	164568268	164571651	.	+	.	ID=FBgn0261383.1.mrna1;Name=FBgn0261383.1;Parent=FBgn0261383.1.path1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=3376;mismatches=8;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	164568268	164571651	99	+	.	ID=FBgn0261383.1.mrna1.exon1;Name=FBgn0261383.1;Parent=FBgn0261383.1.mrna1;Target=FBgn0261383.1 3384 1 .
Chr1	stalkie_big_nohaplotig	CDS	164568268	164571651	99	+	0	ID=FBgn0261383.1.mrna1.cds1;Name=FBgn0261383.1;Parent=FBgn0261383.1.mrna1;Target=FBgn0261383.1 3384 1 .
Chr2	stalkie_big_nohaplotig	mRNA	41725396	41728959	.	+	.	ID=FBgn0033783.1.mrna1;Name=FBgn0033783.1;Parent=FBgn0033783.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=2117;mismatches=10;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	41725396	41725469	98	+	.	ID=FBgn0033783.1.mrna1.exon1;Name=FBgn0033783.1;Parent=FBgn0033783.1.mrna1;Target=FBgn0033783.1 1 74 +
Chr2	stalkie_big_nohaplotig	exon	41725530	41725714	100	+	.	ID=FBgn0033783.1.mrna1.exon2;Name=FBgn0033783.1;Parent=FBgn0033783.1.mrna1;Target=FBgn0033783.1 75 259 +
Chr2	stalkie_big_nohaplotig	exon	41725774	41727328	99	+	.	ID=FBgn0033783.1.mrna1.exon3;Name=FBgn0033783.1;Parent=FBgn0033783.1.mrna1;Target=FBgn0033783.1 260 1814 +
Chr2	stalkie_big_nohaplotig	exon	41728583	41728722	97	+	.	ID=FBgn0033783.1.mrna1.exon4;Name=FBgn0033783.1;Parent=FBgn0033783.1.mrna1;Target=FBgn0033783.1 1815 1954 +
Chr2	stalkie_big_nohaplotig	exon	41728787	41728959	99	+	.	ID=FBgn0033783.1.mrna1.exon5;Name=FBgn0033783.1;Parent=FBgn0033783.1.mrna1;Target=FBgn0033783.1 1955 2127 +
Chr2	stalkie_big_nohaplotig	CDS	41725396	41725469	98	+	0	ID=FBgn0033783.1.mrna1.cds1;Name=FBgn0033783.1;Parent=FBgn0033783.1.mrna1;Target=FBgn0033783.1 1 74 +
Chr2	stalkie_big_nohaplotig	CDS	41725530	41725714	100	+	2	ID=FBgn0033783.1.mrna1.cds2;Name=FBgn0033783.1;Parent=FBgn0033783.1.mrna1;Target=FBgn0033783.1 75 259 +
Chr2	stalkie_big_nohaplotig	CDS	41725774	41727328	99	+	1	ID=FBgn0033783.1.mrna1.cds3;Name=FBgn0033783.1;Parent=FBgn0033783.1.mrna1;Target=FBgn0033783.1 260 1814 +
Chr2	stalkie_big_nohaplotig	CDS	41728583	41728722	97	+	2	ID=FBgn0033783.1.mrna1.cds4;Name=FBgn0033783.1;Parent=FBgn0033783.1.mrna1;Target=FBgn0033783.1 1815 1954 +
Chr2	stalkie_big_nohaplotig	CDS	41728787	41728959	99	+	1	ID=FBgn0033783.1.mrna1.cds5;Name=FBgn0033783.1;Parent=FBgn0033783.1.mrna1;Target=FBgn0033783.1 1955 2127 +
Chr2	stalkie_big_nohaplotig	mRNA	41712808	41717250	.	-	.	ID=FBgn0033785.1.mrna1;Name=FBgn0033785.1;Parent=FBgn0033785.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1519;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	41717225	41717250	100	-	.	ID=FBgn0033785.1.mrna1.exon1;Name=FBgn0033785.1;Parent=FBgn0033785.1.mrna1;Target=FBgn0033785.1 1 26 +
Chr2	stalkie_big_nohaplotig	exon	41714659	41714802	100	-	.	ID=FBgn0033785.1.mrna1.exon2;Name=FBgn0033785.1;Parent=FBgn0033785.1.mrna1;Target=FBgn0033785.1 27 170 +
Chr2	stalkie_big_nohaplotig	exon	41714351	41714572	99	-	.	ID=FBgn0033785.1.mrna1.exon3;Name=FBgn0033785.1;Parent=FBgn0033785.1.mrna1;Target=FBgn0033785.1 171 392 +
Chr2	stalkie_big_nohaplotig	exon	41713318	41714286	99	-	.	ID=FBgn0033785.1.mrna1.exon4;Name=FBgn0033785.1;Parent=FBgn0033785.1.mrna1;Target=FBgn0033785.1 393 1361 +
Chr2	stalkie_big_nohaplotig	exon	41712808	41712970	100	-	.	ID=FBgn0033785.1.mrna1.exon5;Name=FBgn0033785.1;Parent=FBgn0033785.1.mrna1;Target=FBgn0033785.1 1362 1524 +
Chr2	stalkie_big_nohaplotig	CDS	41717225	41717250	100	-	0	ID=FBgn0033785.1.mrna1.cds1;Name=FBgn0033785.1;Parent=FBgn0033785.1.mrna1;Target=FBgn0033785.1 1 26 +
Chr2	stalkie_big_nohaplotig	CDS	41714659	41714802	100	-	2	ID=FBgn0033785.1.mrna1.cds2;Name=FBgn0033785.1;Parent=FBgn0033785.1.mrna1;Target=FBgn0033785.1 27 170 +
Chr2	stalkie_big_nohaplotig	CDS	41714351	41714572	99	-	2	ID=FBgn0033785.1.mrna1.cds3;Name=FBgn0033785.1;Parent=FBgn0033785.1.mrna1;Target=FBgn0033785.1 171 392 +
Chr2	stalkie_big_nohaplotig	CDS	41713318	41714286	99	-	2	ID=FBgn0033785.1.mrna1.cds4;Name=FBgn0033785.1;Parent=FBgn0033785.1.mrna1;Target=FBgn0033785.1 393 1361 +
Chr2	stalkie_big_nohaplotig	CDS	41712808	41712970	100	-	2	ID=FBgn0033785.1.mrna1.cds5;Name=FBgn0033785.1;Parent=FBgn0033785.1.mrna1;Target=FBgn0033785.1 1362 1524 +
Chr1	stalkie_big_nohaplotig	mRNA	70409574	70464637	.	+	.	ID=FBgn0036958.mrna1;Name=FBgn0036958;Parent=FBgn0036958.path1;Dir=sensecoverage=96.2;identity=99.9;matches=2128;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	70409574	70410432	99	+	.	ID=FBgn0036958.mrna1.exon1;Name=FBgn0036958;Parent=FBgn0036958.mrna1;Target=FBgn0036958 1 859 +
Chr1	stalkie_big_nohaplotig	exon	70450299	70450471	100	+	.	ID=FBgn0036958.mrna1.exon2;Name=FBgn0036958;Parent=FBgn0036958.mrna1;Target=FBgn0036958 860 1032 +
Chr1	stalkie_big_nohaplotig	exon	70450579	70450821	100	+	.	ID=FBgn0036958.mrna1.exon3;Name=FBgn0036958;Parent=FBgn0036958.mrna1;Target=FBgn0036958 1033 1275 +
Chr1	stalkie_big_nohaplotig	exon	70463604	70463741	100	+	.	ID=FBgn0036958.mrna1.exon4;Name=FBgn0036958;Parent=FBgn0036958.mrna1;Target=FBgn0036958 1276 1413 +
Chr1	stalkie_big_nohaplotig	exon	70463803	70464052	100	+	.	ID=FBgn0036958.mrna1.exon5;Name=FBgn0036958;Parent=FBgn0036958.mrna1;Target=FBgn0036958 1414 1663 +
Chr1	stalkie_big_nohaplotig	exon	70464114	70464397	100	+	.	ID=FBgn0036958.mrna1.exon6;Name=FBgn0036958;Parent=FBgn0036958.mrna1;Target=FBgn0036958 1664 1947 +
Chr1	stalkie_big_nohaplotig	exon	70464455	70464637	100	+	.	ID=FBgn0036958.mrna1.exon7;Name=FBgn0036958;Parent=FBgn0036958.mrna1;Target=FBgn0036958 1948 2130 +
Chr1	stalkie_big_nohaplotig	CDS	70409574	70410432	99	+	0	ID=FBgn0036958.mrna1.cds1;Name=FBgn0036958;Parent=FBgn0036958.mrna1;Target=FBgn0036958 1 859 +
Chr1	stalkie_big_nohaplotig	CDS	70450299	70450471	100	+	1	ID=FBgn0036958.mrna1.cds2;Name=FBgn0036958;Parent=FBgn0036958.mrna1;Target=FBgn0036958 860 1032 +
Chr1	stalkie_big_nohaplotig	CDS	70450579	70450821	100	+	0	ID=FBgn0036958.mrna1.cds3;Name=FBgn0036958;Parent=FBgn0036958.mrna1;Target=FBgn0036958 1033 1275 +
Chr1	stalkie_big_nohaplotig	CDS	70463604	70463741	100	+	0	ID=FBgn0036958.mrna1.cds4;Name=FBgn0036958;Parent=FBgn0036958.mrna1;Target=FBgn0036958 1276 1413 +
Chr1	stalkie_big_nohaplotig	CDS	70463803	70464052	100	+	0	ID=FBgn0036958.mrna1.cds5;Name=FBgn0036958;Parent=FBgn0036958.mrna1;Target=FBgn0036958 1414 1663 +
Chr1	stalkie_big_nohaplotig	CDS	70464114	70464397	100	+	1	ID=FBgn0036958.mrna1.cds6;Name=FBgn0036958;Parent=FBgn0036958.mrna1;Target=FBgn0036958 1664 1947 +
Chr1	stalkie_big_nohaplotig	CDS	70464455	70464637	100	+	0	ID=FBgn0036958.mrna1.cds7;Name=FBgn0036958;Parent=FBgn0036958.mrna1;Target=FBgn0036958 1948 2130 +
ChrX	stalkie_big_nohaplotig	mRNA	67180281	67181934	.	-	.	ID=ORF2493.mrna1;Name=ORF2493;Parent=ORF2493.path1;Dir=sensecoverage=100.0;identity=99.9;matches=851;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	67181896	67181934	100	-	.	ID=ORF2493.mrna1.exon1;Name=ORF2493;Parent=ORF2493.mrna1;Target=ORF2493 1 39 +
ChrX	stalkie_big_nohaplotig	exon	67180281	67181093	99	-	.	ID=ORF2493.mrna1.exon2;Name=ORF2493;Parent=ORF2493.mrna1;Target=ORF2493 40 852 +
ChrX	stalkie_big_nohaplotig	CDS	67181896	67181934	100	-	0	ID=ORF2493.mrna1.cds1;Name=ORF2493;Parent=ORF2493.mrna1;Target=ORF2493 1 39 +
ChrX	stalkie_big_nohaplotig	CDS	67180281	67181093	99	-	0	ID=ORF2493.mrna1.cds2;Name=ORF2493;Parent=ORF2493.mrna1;Target=ORF2493 40 852 +
Chr1	stalkie_big_nohaplotig	mRNA	53987009	54020481	.	+	.	ID=FBgn0042630.2.mrna1;Name=FBgn0042630.2;Parent=FBgn0042630.2.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1695;mismatches=6;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	53987009	53987625	99	+	.	ID=FBgn0042630.2.mrna1.exon1;Name=FBgn0042630.2;Parent=FBgn0042630.2.mrna1;Target=FBgn0042630.2 1 617 +
Chr1	stalkie_big_nohaplotig	exon	53988013	53988176	99	+	.	ID=FBgn0042630.2.mrna1.exon2;Name=FBgn0042630.2;Parent=FBgn0042630.2.mrna1;Target=FBgn0042630.2 618 781 +
Chr1	stalkie_big_nohaplotig	exon	54008030	54008096	100	+	.	ID=FBgn0042630.2.mrna1.exon3;Name=FBgn0042630.2;Parent=FBgn0042630.2.mrna1;Target=FBgn0042630.2 782 848 +
Chr1	stalkie_big_nohaplotig	exon	54008270	54008397	100	+	.	ID=FBgn0042630.2.mrna1.exon4;Name=FBgn0042630.2;Parent=FBgn0042630.2.mrna1;Target=FBgn0042630.2 849 976 +
Chr1	stalkie_big_nohaplotig	exon	54011620	54011708	100	+	.	ID=FBgn0042630.2.mrna1.exon5;Name=FBgn0042630.2;Parent=FBgn0042630.2.mrna1;Target=FBgn0042630.2 977 1065 +
Chr1	stalkie_big_nohaplotig	exon	54019846	54020481	99	+	.	ID=FBgn0042630.2.mrna1.exon6;Name=FBgn0042630.2;Parent=FBgn0042630.2.mrna1;Target=FBgn0042630.2 1066 1701 +
Chr1	stalkie_big_nohaplotig	CDS	53987009	53987625	99	+	0	ID=FBgn0042630.2.mrna1.cds1;Name=FBgn0042630.2;Parent=FBgn0042630.2.mrna1;Target=FBgn0042630.2 1 617 +
Chr1	stalkie_big_nohaplotig	CDS	53988013	53988176	99	+	2	ID=FBgn0042630.2.mrna1.cds2;Name=FBgn0042630.2;Parent=FBgn0042630.2.mrna1;Target=FBgn0042630.2 618 781 +
Chr1	stalkie_big_nohaplotig	CDS	54008030	54008096	100	+	1	ID=FBgn0042630.2.mrna1.cds3;Name=FBgn0042630.2;Parent=FBgn0042630.2.mrna1;Target=FBgn0042630.2 782 848 +
Chr1	stalkie_big_nohaplotig	CDS	54008270	54008397	100	+	2	ID=FBgn0042630.2.mrna1.cds4;Name=FBgn0042630.2;Parent=FBgn0042630.2.mrna1;Target=FBgn0042630.2 849 976 +
Chr1	stalkie_big_nohaplotig	CDS	54011620	54011708	100	+	1	ID=FBgn0042630.2.mrna1.cds5;Name=FBgn0042630.2;Parent=FBgn0042630.2.mrna1;Target=FBgn0042630.2 977 1065 +
Chr1	stalkie_big_nohaplotig	CDS	54019846	54020481	99	+	0	ID=FBgn0042630.2.mrna1.cds6;Name=FBgn0042630.2;Parent=FBgn0042630.2.mrna1;Target=FBgn0042630.2 1066 1701 +
Chr2	stalkie_big_nohaplotig	mRNA	98896745	98899479	.	-	.	ID=FBgn0051530.1.mrna1;Name=FBgn0051530.1;Parent=FBgn0051530.1.path1;Dir=sensecoverage=99.3;identity=99.9;matches=1607;mismatches=0;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	98898392	98899479	100	-	.	ID=FBgn0051530.1.mrna1.exon1;Name=FBgn0051530.1;Parent=FBgn0051530.1.mrna1;Target=FBgn0051530.1 13 1100 +
Chr2	stalkie_big_nohaplotig	exon	98897242	98897396	100	-	.	ID=FBgn0051530.1.mrna1.exon2;Name=FBgn0051530.1;Parent=FBgn0051530.1.mrna1;Target=FBgn0051530.1 1101 1255 +
Chr2	stalkie_big_nohaplotig	exon	98897000	98897168	100	-	.	ID=FBgn0051530.1.mrna1.exon3;Name=FBgn0051530.1;Parent=FBgn0051530.1.mrna1;Target=FBgn0051530.1 1256 1424 +
Chr2	stalkie_big_nohaplotig	exon	98896745	98896939	99	-	.	ID=FBgn0051530.1.mrna1.exon4;Name=FBgn0051530.1;Parent=FBgn0051530.1.mrna1;Target=FBgn0051530.1 1425 1620 +
Chr2	stalkie_big_nohaplotig	CDS	98898392	98899479	100	-	0	ID=FBgn0051530.1.mrna1.cds1;Name=FBgn0051530.1;Parent=FBgn0051530.1.mrna1;Target=FBgn0051530.1 13 1100 +
Chr2	stalkie_big_nohaplotig	CDS	98897242	98897396	100	-	2	ID=FBgn0051530.1.mrna1.cds2;Name=FBgn0051530.1;Parent=FBgn0051530.1.mrna1;Target=FBgn0051530.1 1101 1255 +
Chr2	stalkie_big_nohaplotig	CDS	98897000	98897168	100	-	1	ID=FBgn0051530.1.mrna1.cds3;Name=FBgn0051530.1;Parent=FBgn0051530.1.mrna1;Target=FBgn0051530.1 1256 1424 +
Chr2	stalkie_big_nohaplotig	CDS	98896745	98896939	99	-	2	ID=FBgn0051530.1.mrna1.cds4;Name=FBgn0051530.1;Parent=FBgn0051530.1.mrna1;Target=FBgn0051530.1 1425 1620 +
Chr2	stalkie_big_nohaplotig	mRNA	140371547	140377173	.	-	.	ID=FBgn0030051.4.mrna1;Name=FBgn0030051.4;Parent=FBgn0030051.4.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1070;mismatches=4;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	140377077	140377173	97	-	.	ID=FBgn0030051.4.mrna1.exon1;Name=FBgn0030051.4;Parent=FBgn0030051.4.mrna1;Target=FBgn0030051.4 1 97 +
Chr2	stalkie_big_nohaplotig	exon	140376795	140377016	100	-	.	ID=FBgn0030051.4.mrna1.exon2;Name=FBgn0030051.4;Parent=FBgn0030051.4.mrna1;Target=FBgn0030051.4 98 319 +
Chr2	stalkie_big_nohaplotig	exon	140376650	140376726	100	-	.	ID=FBgn0030051.4.mrna1.exon3;Name=FBgn0030051.4;Parent=FBgn0030051.4.mrna1;Target=FBgn0030051.4 320 396 +
Chr2	stalkie_big_nohaplotig	exon	140376438	140376550	100	-	.	ID=FBgn0030051.4.mrna1.exon4;Name=FBgn0030051.4;Parent=FBgn0030051.4.mrna1;Target=FBgn0030051.4 397 509 +
Chr2	stalkie_big_nohaplotig	exon	140374781	140374933	100	-	.	ID=FBgn0030051.4.mrna1.exon5;Name=FBgn0030051.4;Parent=FBgn0030051.4.mrna1;Target=FBgn0030051.4 510 662 +
Chr2	stalkie_big_nohaplotig	exon	140374470	140374555	100	-	.	ID=FBgn0030051.4.mrna1.exon6;Name=FBgn0030051.4;Parent=FBgn0030051.4.mrna1;Target=FBgn0030051.4 663 748 +
Chr2	stalkie_big_nohaplotig	exon	140374258	140374415	98	-	.	ID=FBgn0030051.4.mrna1.exon7;Name=FBgn0030051.4;Parent=FBgn0030051.4.mrna1;Target=FBgn0030051.4 749 906 +
Chr2	stalkie_big_nohaplotig	exon	140371547	140371714	100	-	.	ID=FBgn0030051.4.mrna1.exon8;Name=FBgn0030051.4;Parent=FBgn0030051.4.mrna1;Target=FBgn0030051.4 907 1074 +
Chr2	stalkie_big_nohaplotig	CDS	140377077	140377173	97	-	0	ID=FBgn0030051.4.mrna1.cds1;Name=FBgn0030051.4;Parent=FBgn0030051.4.mrna1;Target=FBgn0030051.4 1 97 +
Chr2	stalkie_big_nohaplotig	CDS	140376795	140377016	100	-	1	ID=FBgn0030051.4.mrna1.cds2;Name=FBgn0030051.4;Parent=FBgn0030051.4.mrna1;Target=FBgn0030051.4 98 319 +
Chr2	stalkie_big_nohaplotig	CDS	140376650	140376726	100	-	1	ID=FBgn0030051.4.mrna1.cds3;Name=FBgn0030051.4;Parent=FBgn0030051.4.mrna1;Target=FBgn0030051.4 320 396 +
Chr2	stalkie_big_nohaplotig	CDS	140376438	140376550	100	-	0	ID=FBgn0030051.4.mrna1.cds4;Name=FBgn0030051.4;Parent=FBgn0030051.4.mrna1;Target=FBgn0030051.4 397 509 +
Chr2	stalkie_big_nohaplotig	CDS	140374781	140374933	100	-	2	ID=FBgn0030051.4.mrna1.cds5;Name=FBgn0030051.4;Parent=FBgn0030051.4.mrna1;Target=FBgn0030051.4 510 662 +
Chr2	stalkie_big_nohaplotig	CDS	140374470	140374555	100	-	2	ID=FBgn0030051.4.mrna1.cds6;Name=FBgn0030051.4;Parent=FBgn0030051.4.mrna1;Target=FBgn0030051.4 663 748 +
Chr2	stalkie_big_nohaplotig	CDS	140374258	140374415	98	-	1	ID=FBgn0030051.4.mrna1.cds7;Name=FBgn0030051.4;Parent=FBgn0030051.4.mrna1;Target=FBgn0030051.4 749 906 +
Chr2	stalkie_big_nohaplotig	CDS	140371547	140371714	100	-	0	ID=FBgn0030051.4.mrna1.cds8;Name=FBgn0030051.4;Parent=FBgn0030051.4.mrna1;Target=FBgn0030051.4 907 1074 +
Chr2	stalkie_big_nohaplotig	mRNA	97359240	97360114	.	+	.	ID=FBgn0038737.1.mrna1;Name=FBgn0038737.1;Parent=FBgn0038737.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=818;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	97359240	97359659	100	+	.	ID=FBgn0038737.1.mrna1.exon1;Name=FBgn0038737.1;Parent=FBgn0038737.1.mrna1;Target=FBgn0038737.1 1 420 +
Chr2	stalkie_big_nohaplotig	exon	97359716	97360114	99	+	.	ID=FBgn0038737.1.mrna1.exon2;Name=FBgn0038737.1;Parent=FBgn0038737.1.mrna1;Target=FBgn0038737.1 421 819 +
Chr2	stalkie_big_nohaplotig	CDS	97359240	97359659	100	+	0	ID=FBgn0038737.1.mrna1.cds1;Name=FBgn0038737.1;Parent=FBgn0038737.1.mrna1;Target=FBgn0038737.1 1 420 +
Chr2	stalkie_big_nohaplotig	CDS	97359716	97360114	99	+	0	ID=FBgn0038737.1.mrna1.cds2;Name=FBgn0038737.1;Parent=FBgn0038737.1.mrna1;Target=FBgn0038737.1 421 819 +
Chr2	stalkie_big_nohaplotig	mRNA	97360281	97361795	.	-	.	ID=FBgn0038738.1.mrna1;Name=FBgn0038738.1;Parent=FBgn0038738.1.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=1515;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	97360281	97361795	100	-	.	ID=FBgn0038738.1.mrna1.exon1;Name=FBgn0038738.1;Parent=FBgn0038738.1.mrna1;Target=FBgn0038738.1 1515 1 .
Chr2	stalkie_big_nohaplotig	CDS	97360281	97361795	100	-	0	ID=FBgn0038738.1.mrna1.cds1;Name=FBgn0038738.1;Parent=FBgn0038738.1.mrna1;Target=FBgn0038738.1 1515 1 .
Chr2	stalkie_big_nohaplotig	mRNA	97354718	97358166	.	-	.	ID=FBgn0038739.1.mrna1;Name=FBgn0038739.1;Parent=FBgn0038739.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=540;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	97358059	97358166	100	-	.	ID=FBgn0038739.1.mrna1.exon1;Name=FBgn0038739.1;Parent=FBgn0038739.1.mrna1;Target=FBgn0038739.1 1 108 +
Chr2	stalkie_big_nohaplotig	exon	97357710	97358000	100	-	.	ID=FBgn0038739.1.mrna1.exon2;Name=FBgn0038739.1;Parent=FBgn0038739.1.mrna1;Target=FBgn0038739.1 109 399 +
Chr2	stalkie_big_nohaplotig	exon	97354718	97354858	100	-	.	ID=FBgn0038739.1.mrna1.exon3;Name=FBgn0038739.1;Parent=FBgn0038739.1.mrna1;Target=FBgn0038739.1 400 540 +
Chr2	stalkie_big_nohaplotig	CDS	97358059	97358166	100	-	0	ID=FBgn0038739.1.mrna1.cds1;Name=FBgn0038739.1;Parent=FBgn0038739.1.mrna1;Target=FBgn0038739.1 1 108 +
Chr2	stalkie_big_nohaplotig	CDS	97357710	97358000	100	-	0	ID=FBgn0038739.1.mrna1.cds2;Name=FBgn0038739.1;Parent=FBgn0038739.1.mrna1;Target=FBgn0038739.1 109 399 +
Chr2	stalkie_big_nohaplotig	CDS	97354718	97354858	100	-	0	ID=FBgn0038739.1.mrna1.cds3;Name=FBgn0038739.1;Parent=FBgn0038739.1.mrna1;Target=FBgn0038739.1 400 540 +
Chr1	stalkie_big_nohaplotig	mRNA	150980806	150981406	.	+	.	ID=FBgn0026149.1.mrna1;Name=FBgn0026149.1;Parent=FBgn0026149.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=407;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	150980806	150980906	99	+	.	ID=FBgn0026149.1.mrna1.exon1;Name=FBgn0026149.1;Parent=FBgn0026149.1.mrna1;Target=FBgn0026149.1 1 101 +
Chr1	stalkie_big_nohaplotig	exon	150980967	150981154	100	+	.	ID=FBgn0026149.1.mrna1.exon2;Name=FBgn0026149.1;Parent=FBgn0026149.1.mrna1;Target=FBgn0026149.1 102 289 +
Chr1	stalkie_big_nohaplotig	exon	150981288	150981406	100	+	.	ID=FBgn0026149.1.mrna1.exon3;Name=FBgn0026149.1;Parent=FBgn0026149.1.mrna1;Target=FBgn0026149.1 290 408 +
Chr1	stalkie_big_nohaplotig	CDS	150980806	150980906	99	+	0	ID=FBgn0026149.1.mrna1.cds1;Name=FBgn0026149.1;Parent=FBgn0026149.1.mrna1;Target=FBgn0026149.1 1 101 +
Chr1	stalkie_big_nohaplotig	CDS	150980967	150981154	100	+	2	ID=FBgn0026149.1.mrna1.cds2;Name=FBgn0026149.1;Parent=FBgn0026149.1.mrna1;Target=FBgn0026149.1 102 289 +
Chr1	stalkie_big_nohaplotig	CDS	150981288	150981406	100	+	1	ID=FBgn0026149.1.mrna1.cds3;Name=FBgn0026149.1;Parent=FBgn0026149.1.mrna1;Target=FBgn0026149.1 290 408 +
Chr2	stalkie_big_nohaplotig	mRNA	20638745	20645731	.	-	.	ID=FBgn0033474.1.mrna1;Name=FBgn0033474.1;Parent=FBgn0033474.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1335;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	20645458	20645731	100	-	.	ID=FBgn0033474.1.mrna1.exon1;Name=FBgn0033474.1;Parent=FBgn0033474.1.mrna1;Target=FBgn0033474.1 1 274 +
Chr2	stalkie_big_nohaplotig	exon	20645281	20645402	100	-	.	ID=FBgn0033474.1.mrna1.exon2;Name=FBgn0033474.1;Parent=FBgn0033474.1.mrna1;Target=FBgn0033474.1 275 396 +
Chr2	stalkie_big_nohaplotig	exon	20643053	20643159	100	-	.	ID=FBgn0033474.1.mrna1.exon3;Name=FBgn0033474.1;Parent=FBgn0033474.1.mrna1;Target=FBgn0033474.1 397 503 +
Chr2	stalkie_big_nohaplotig	exon	20642748	20642985	100	-	.	ID=FBgn0033474.1.mrna1.exon4;Name=FBgn0033474.1;Parent=FBgn0033474.1.mrna1;Target=FBgn0033474.1 504 741 +
Chr2	stalkie_big_nohaplotig	exon	20642465	20642597	100	-	.	ID=FBgn0033474.1.mrna1.exon5;Name=FBgn0033474.1;Parent=FBgn0033474.1.mrna1;Target=FBgn0033474.1 742 874 +
Chr2	stalkie_big_nohaplotig	exon	20642250	20642379	100	-	.	ID=FBgn0033474.1.mrna1.exon6;Name=FBgn0033474.1;Parent=FBgn0033474.1.mrna1;Target=FBgn0033474.1 875 1004 +
Chr2	stalkie_big_nohaplotig	exon	20639097	20639171	100	-	.	ID=FBgn0033474.1.mrna1.exon7;Name=FBgn0033474.1;Parent=FBgn0033474.1.mrna1;Target=FBgn0033474.1 1005 1079 +
Chr2	stalkie_big_nohaplotig	exon	20638745	20639000	100	-	.	ID=FBgn0033474.1.mrna1.exon8;Name=FBgn0033474.1;Parent=FBgn0033474.1.mrna1;Target=FBgn0033474.1 1080 1335 +
Chr2	stalkie_big_nohaplotig	CDS	20645458	20645731	100	-	0	ID=FBgn0033474.1.mrna1.cds1;Name=FBgn0033474.1;Parent=FBgn0033474.1.mrna1;Target=FBgn0033474.1 1 274 +
Chr2	stalkie_big_nohaplotig	CDS	20645281	20645402	100	-	1	ID=FBgn0033474.1.mrna1.cds2;Name=FBgn0033474.1;Parent=FBgn0033474.1.mrna1;Target=FBgn0033474.1 275 396 +
Chr2	stalkie_big_nohaplotig	CDS	20643053	20643159	100	-	0	ID=FBgn0033474.1.mrna1.cds3;Name=FBgn0033474.1;Parent=FBgn0033474.1.mrna1;Target=FBgn0033474.1 397 503 +
Chr2	stalkie_big_nohaplotig	CDS	20642748	20642985	100	-	2	ID=FBgn0033474.1.mrna1.cds4;Name=FBgn0033474.1;Parent=FBgn0033474.1.mrna1;Target=FBgn0033474.1 504 741 +
Chr2	stalkie_big_nohaplotig	CDS	20642465	20642597	100	-	0	ID=FBgn0033474.1.mrna1.cds5;Name=FBgn0033474.1;Parent=FBgn0033474.1.mrna1;Target=FBgn0033474.1 742 874 +
Chr2	stalkie_big_nohaplotig	CDS	20642250	20642379	100	-	1	ID=FBgn0033474.1.mrna1.cds6;Name=FBgn0033474.1;Parent=FBgn0033474.1.mrna1;Target=FBgn0033474.1 875 1004 +
Chr2	stalkie_big_nohaplotig	CDS	20639097	20639171	100	-	2	ID=FBgn0033474.1.mrna1.cds7;Name=FBgn0033474.1;Parent=FBgn0033474.1.mrna1;Target=FBgn0033474.1 1005 1079 +
Chr2	stalkie_big_nohaplotig	CDS	20638745	20639000	100	-	2	ID=FBgn0033474.1.mrna1.cds8;Name=FBgn0033474.1;Parent=FBgn0033474.1.mrna1;Target=FBgn0033474.1 1080 1335 +
ChrX	stalkie_big_nohaplotig	mRNA	31784850	31785761	.	-	.	ID=FBgn0260470.1.mrna1;Name=FBgn0260470.1;Parent=FBgn0260470.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=845;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	31785165	31785761	99	-	.	ID=FBgn0260470.1.mrna1.exon1;Name=FBgn0260470.1;Parent=FBgn0260470.1.mrna1;Target=FBgn0260470.1 1 597 +
ChrX	stalkie_big_nohaplotig	exon	31784850	31785098	100	-	.	ID=FBgn0260470.1.mrna1.exon2;Name=FBgn0260470.1;Parent=FBgn0260470.1.mrna1;Target=FBgn0260470.1 598 846 +
ChrX	stalkie_big_nohaplotig	CDS	31785165	31785761	99	-	0	ID=FBgn0260470.1.mrna1.cds1;Name=FBgn0260470.1;Parent=FBgn0260470.1.mrna1;Target=FBgn0260470.1 1 597 +
ChrX	stalkie_big_nohaplotig	CDS	31784850	31785098	100	-	0	ID=FBgn0260470.1.mrna1.cds2;Name=FBgn0260470.1;Parent=FBgn0260470.1.mrna1;Target=FBgn0260470.1 598 846 +
ChrX	stalkie_big_nohaplotig	mRNA	87830101	87831585	.	-	.	ID=ORF727.mrna1;Name=ORF727;Parent=ORF727.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1484;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	87830101	87831585	99	-	.	ID=ORF727.mrna1.exon1;Name=ORF727;Parent=ORF727.mrna1;Target=ORF727 1485 1 .
ChrX	stalkie_big_nohaplotig	CDS	87830101	87831585	99	-	0	ID=ORF727.mrna1.cds1;Name=ORF727;Parent=ORF727.mrna1;Target=ORF727 1485 1 .
ChrX	stalkie_big_nohaplotig	mRNA	87839657	87841141	.	-	.	ID=ORF727.mrna2;Name=ORF727;Parent=ORF727.path2;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1484;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	87839657	87841141	99	-	.	ID=ORF727.mrna2.exon1;Name=ORF727;Parent=ORF727.mrna2;Target=ORF727 1485 1 .
ChrX	stalkie_big_nohaplotig	CDS	87839657	87841141	99	-	0	ID=ORF727.mrna2.cds1;Name=ORF727;Parent=ORF727.mrna2;Target=ORF727 1485 1 .
ChrX	stalkie_big_nohaplotig	mRNA	88446615	88447493	.	-	.	ID=FBgn0263027.1.mrna1;Name=FBgn0263027.1;Parent=FBgn0263027.1.path1;Dir=sensecoverage=99.9;identity=99.9;matches=814;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	88447362	88447493	100	-	.	ID=FBgn0263027.1.mrna1.exon1;Name=FBgn0263027.1;Parent=FBgn0263027.1.mrna1;Target=FBgn0263027.1 1 132 +
ChrX	stalkie_big_nohaplotig	exon	88446615	88447297	99	-	.	ID=FBgn0263027.1.mrna1.exon2;Name=FBgn0263027.1;Parent=FBgn0263027.1.mrna1;Target=FBgn0263027.1 133 815 +
ChrX	stalkie_big_nohaplotig	CDS	88447362	88447493	100	-	0	ID=FBgn0263027.1.mrna1.cds1;Name=FBgn0263027.1;Parent=FBgn0263027.1.mrna1;Target=FBgn0263027.1 1 132 +
ChrX	stalkie_big_nohaplotig	CDS	88446617	88447297	99	-	0	ID=FBgn0263027.1.mrna1.cds2;Name=FBgn0263027.1;Parent=FBgn0263027.1.mrna1;Target=FBgn0263027.1 133 813 +
ChrX	stalkie_big_nohaplotig	mRNA	88339036	88340097	.	-	.	ID=FBgn0031774.1.mrna1;Name=FBgn0031774.1;Parent=FBgn0031774.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1009;mismatches=2;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	88339358	88340097	99	-	.	ID=FBgn0031774.1.mrna1.exon1;Name=FBgn0031774.1;Parent=FBgn0031774.1.mrna1;Target=FBgn0031774.1 1 740 +
ChrX	stalkie_big_nohaplotig	exon	88339036	88339306	100	-	.	ID=FBgn0031774.1.mrna1.exon2;Name=FBgn0031774.1;Parent=FBgn0031774.1.mrna1;Target=FBgn0031774.1 741 1011 +
ChrX	stalkie_big_nohaplotig	CDS	88339358	88340097	99	-	0	ID=FBgn0031774.1.mrna1.cds1;Name=FBgn0031774.1;Parent=FBgn0031774.1.mrna1;Target=FBgn0031774.1 1 740 +
ChrX	stalkie_big_nohaplotig	CDS	88339036	88339306	100	-	2	ID=FBgn0031774.1.mrna1.cds2;Name=FBgn0031774.1;Parent=FBgn0031774.1.mrna1;Target=FBgn0031774.1 741 1011 +
ChrX	stalkie_big_nohaplotig	mRNA	88629848	88630857	.	+	.	ID=FBgn0032178.1.mrna1;Name=FBgn0032178.1;Parent=FBgn0032178.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=765;mismatches=0;indels=1;unknowns=2
ChrX	stalkie_big_nohaplotig	exon	88629848	88630338	99	+	.	ID=FBgn0032178.1.mrna1.exon1;Name=FBgn0032178.1;Parent=FBgn0032178.1.mrna1;Target=FBgn0032178.1 1 492 +
ChrX	stalkie_big_nohaplotig	exon	88630419	88630566	100	+	.	ID=FBgn0032178.1.mrna1.exon2;Name=FBgn0032178.1;Parent=FBgn0032178.1.mrna1;Target=FBgn0032178.1 493 640 +
ChrX	stalkie_big_nohaplotig	exon	88630730	88630857	100	+	.	ID=FBgn0032178.1.mrna1.exon3;Name=FBgn0032178.1;Parent=FBgn0032178.1.mrna1;Target=FBgn0032178.1 641 768 +
ChrX	stalkie_big_nohaplotig	CDS	88629850	88629878	96	+	0	ID=FBgn0032178.1.mrna1.cds1;Name=FBgn0032178.1;Parent=FBgn0032178.1.mrna1;Target=FBgn0032178.1 3 32 +
ChrX	stalkie_big_nohaplotig	mRNA	87990909	87992297	.	-	.	ID=ORF853.mrna1;Name=ORF853;Parent=ORF853.path1;Dir=indeterminatecoverage=100.0;identity=98.9;matches=1374;mismatches=15;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	87990909	87992297	98	-	.	ID=ORF853.mrna1.exon1;Name=ORF853;Parent=ORF853.mrna1;Target=ORF853 1389 1 .
ChrX	stalkie_big_nohaplotig	CDS	87990909	87992297	98	-	0	ID=ORF853.mrna1.cds1;Name=ORF853;Parent=ORF853.mrna1;Target=ORF853 1389 1 .
Chr1	stalkie_big_nohaplotig	mRNA	57554965	57558648	.	-	.	ID=FBgn0026376.1.mrna1;Name=FBgn0026376.1;Parent=FBgn0026376.1.path1;Dir=sensecoverage=97.7;identity=99.8;matches=2290;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	57558547	57558648	100	-	.	ID=FBgn0026376.1.mrna1.exon1;Name=FBgn0026376.1;Parent=FBgn0026376.1.mrna1;Target=FBgn0026376.1 55 156 +
Chr1	stalkie_big_nohaplotig	exon	57557615	57558490	99	-	.	ID=FBgn0026376.1.mrna1.exon2;Name=FBgn0026376.1;Parent=FBgn0026376.1.mrna1;Target=FBgn0026376.1 157 1032 +
Chr1	stalkie_big_nohaplotig	exon	57557394	57557546	100	-	.	ID=FBgn0026376.1.mrna1.exon3;Name=FBgn0026376.1;Parent=FBgn0026376.1.mrna1;Target=FBgn0026376.1 1033 1185 +
Chr1	stalkie_big_nohaplotig	exon	57556050	57556199	99	-	.	ID=FBgn0026376.1.mrna1.exon4;Name=FBgn0026376.1;Parent=FBgn0026376.1.mrna1;Target=FBgn0026376.1 1186 1335 +
Chr1	stalkie_big_nohaplotig	exon	57554965	57555978	99	-	.	ID=FBgn0026376.1.mrna1.exon5;Name=FBgn0026376.1;Parent=FBgn0026376.1.mrna1;Target=FBgn0026376.1 1336 2349 +
Chr1	stalkie_big_nohaplotig	CDS	57558547	57558648	100	-	0	ID=FBgn0026376.1.mrna1.cds1;Name=FBgn0026376.1;Parent=FBgn0026376.1.mrna1;Target=FBgn0026376.1 55 156 +
Chr1	stalkie_big_nohaplotig	CDS	57557615	57558490	99	-	0	ID=FBgn0026376.1.mrna1.cds2;Name=FBgn0026376.1;Parent=FBgn0026376.1.mrna1;Target=FBgn0026376.1 157 1032 +
Chr1	stalkie_big_nohaplotig	CDS	57557394	57557546	100	-	0	ID=FBgn0026376.1.mrna1.cds3;Name=FBgn0026376.1;Parent=FBgn0026376.1.mrna1;Target=FBgn0026376.1 1033 1185 +
Chr1	stalkie_big_nohaplotig	CDS	57556050	57556199	99	-	0	ID=FBgn0026376.1.mrna1.cds4;Name=FBgn0026376.1;Parent=FBgn0026376.1.mrna1;Target=FBgn0026376.1 1186 1335 +
Chr1	stalkie_big_nohaplotig	CDS	57554965	57555978	99	-	0	ID=FBgn0026376.1.mrna1.cds5;Name=FBgn0026376.1;Parent=FBgn0026376.1.mrna1;Target=FBgn0026376.1 1336 2349 +
Chr2	stalkie_big_nohaplotig	mRNA	62365833	62370377	.	+	.	ID=FBgn0263102.1.mrna1;Name=FBgn0263102.1;Parent=FBgn0263102.1.path1;Dir=sensecoverage=88.0;identity=99.7;matches=2358;mismatches=6;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	62365833	62366564	99	+	.	ID=FBgn0263102.1.mrna1.exon1;Name=FBgn0263102.1;Parent=FBgn0263102.1.mrna1;Target=FBgn0263102.1 322 1053 +
Chr2	stalkie_big_nohaplotig	exon	62366686	62366824	99	+	.	ID=FBgn0263102.1.mrna1.exon2;Name=FBgn0263102.1;Parent=FBgn0263102.1.mrna1;Target=FBgn0263102.1 1054 1192 +
Chr2	stalkie_big_nohaplotig	exon	62367209	62367601	100	+	.	ID=FBgn0263102.1.mrna1.exon3;Name=FBgn0263102.1;Parent=FBgn0263102.1.mrna1;Target=FBgn0263102.1 1193 1585 +
Chr2	stalkie_big_nohaplotig	exon	62368771	62369328	100	+	.	ID=FBgn0263102.1.mrna1.exon4;Name=FBgn0263102.1;Parent=FBgn0263102.1.mrna1;Target=FBgn0263102.1 1586 2143 +
Chr2	stalkie_big_nohaplotig	exon	62369637	62369739	99	+	.	ID=FBgn0263102.1.mrna1.exon5;Name=FBgn0263102.1;Parent=FBgn0263102.1.mrna1;Target=FBgn0263102.1 2144 2246 +
Chr2	stalkie_big_nohaplotig	exon	62369820	62370000	100	+	.	ID=FBgn0263102.1.mrna1.exon6;Name=FBgn0263102.1;Parent=FBgn0263102.1.mrna1;Target=FBgn0263102.1 2247 2427 +
Chr2	stalkie_big_nohaplotig	exon	62370120	62370377	100	+	.	ID=FBgn0263102.1.mrna1.exon7;Name=FBgn0263102.1;Parent=FBgn0263102.1.mrna1;Target=FBgn0263102.1 2428 2685 +
Chr2	stalkie_big_nohaplotig	CDS	62365833	62366564	99	+	0	ID=FBgn0263102.1.mrna1.cds1;Name=FBgn0263102.1;Parent=FBgn0263102.1.mrna1;Target=FBgn0263102.1 322 1053 +
Chr2	stalkie_big_nohaplotig	CDS	62366686	62366824	99	+	0	ID=FBgn0263102.1.mrna1.cds2;Name=FBgn0263102.1;Parent=FBgn0263102.1.mrna1;Target=FBgn0263102.1 1054 1192 +
Chr2	stalkie_big_nohaplotig	CDS	62367209	62367601	100	+	1	ID=FBgn0263102.1.mrna1.cds3;Name=FBgn0263102.1;Parent=FBgn0263102.1.mrna1;Target=FBgn0263102.1 1193 1585 +
Chr2	stalkie_big_nohaplotig	CDS	62368771	62369328	100	+	1	ID=FBgn0263102.1.mrna1.cds4;Name=FBgn0263102.1;Parent=FBgn0263102.1.mrna1;Target=FBgn0263102.1 1586 2143 +
Chr2	stalkie_big_nohaplotig	CDS	62369637	62369739	99	+	1	ID=FBgn0263102.1.mrna1.cds5;Name=FBgn0263102.1;Parent=FBgn0263102.1.mrna1;Target=FBgn0263102.1 2144 2246 +
Chr2	stalkie_big_nohaplotig	CDS	62369820	62370000	100	+	2	ID=FBgn0263102.1.mrna1.cds6;Name=FBgn0263102.1;Parent=FBgn0263102.1.mrna1;Target=FBgn0263102.1 2247 2427 +
Chr2	stalkie_big_nohaplotig	CDS	62370120	62370377	100	+	0	ID=FBgn0263102.1.mrna1.cds7;Name=FBgn0263102.1;Parent=FBgn0263102.1.mrna1;Target=FBgn0263102.1 2428 2685 +
Chr2	stalkie_big_nohaplotig	mRNA	18504068	18507162	.	+	.	ID=FBgn0033609.1.mrna1;Name=FBgn0033609.1;Parent=FBgn0033609.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=2446;mismatches=8;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	18504068	18504086	100	+	.	ID=FBgn0033609.1.mrna1.exon1;Name=FBgn0033609.1;Parent=FBgn0033609.1.mrna1;Target=FBgn0033609.1 1 19 +
Chr2	stalkie_big_nohaplotig	exon	18504224	18504981	99	+	.	ID=FBgn0033609.1.mrna1.exon2;Name=FBgn0033609.1;Parent=FBgn0033609.1.mrna1;Target=FBgn0033609.1 20 777 +
Chr2	stalkie_big_nohaplotig	exon	18505047	18505355	100	+	.	ID=FBgn0033609.1.mrna1.exon3;Name=FBgn0033609.1;Parent=FBgn0033609.1.mrna1;Target=FBgn0033609.1 778 1086 +
Chr2	stalkie_big_nohaplotig	exon	18505420	18505630	99	+	.	ID=FBgn0033609.1.mrna1.exon4;Name=FBgn0033609.1;Parent=FBgn0033609.1.mrna1;Target=FBgn0033609.1 1087 1297 +
Chr2	stalkie_big_nohaplotig	exon	18505699	18505868	99	+	.	ID=FBgn0033609.1.mrna1.exon5;Name=FBgn0033609.1;Parent=FBgn0033609.1.mrna1;Target=FBgn0033609.1 1298 1467 +
Chr2	stalkie_big_nohaplotig	exon	18505936	18506076	100	+	.	ID=FBgn0033609.1.mrna1.exon6;Name=FBgn0033609.1;Parent=FBgn0033609.1.mrna1;Target=FBgn0033609.1 1468 1608 +
Chr2	stalkie_big_nohaplotig	exon	18506133	18506300	98	+	.	ID=FBgn0033609.1.mrna1.exon7;Name=FBgn0033609.1;Parent=FBgn0033609.1.mrna1;Target=FBgn0033609.1 1609 1776 +
Chr2	stalkie_big_nohaplotig	exon	18506355	18506587	100	+	.	ID=FBgn0033609.1.mrna1.exon8;Name=FBgn0033609.1;Parent=FBgn0033609.1.mrna1;Target=FBgn0033609.1 1777 2009 +
Chr2	stalkie_big_nohaplotig	exon	18506657	18506791	100	+	.	ID=FBgn0033609.1.mrna1.exon9;Name=FBgn0033609.1;Parent=FBgn0033609.1.mrna1;Target=FBgn0033609.1 2010 2144 +
Chr2	stalkie_big_nohaplotig	exon	18506853	18507162	99	+	.	ID=FBgn0033609.1.mrna1.exon10;Name=FBgn0033609.1;Parent=FBgn0033609.1.mrna1;Target=FBgn0033609.1 2145 2454 +
Chr2	stalkie_big_nohaplotig	CDS	18504068	18504086	100	+	0	ID=FBgn0033609.1.mrna1.cds1;Name=FBgn0033609.1;Parent=FBgn0033609.1.mrna1;Target=FBgn0033609.1 1 19 +
Chr2	stalkie_big_nohaplotig	CDS	18504224	18504981	99	+	1	ID=FBgn0033609.1.mrna1.cds2;Name=FBgn0033609.1;Parent=FBgn0033609.1.mrna1;Target=FBgn0033609.1 20 777 +
Chr2	stalkie_big_nohaplotig	CDS	18505047	18505355	100	+	0	ID=FBgn0033609.1.mrna1.cds3;Name=FBgn0033609.1;Parent=FBgn0033609.1.mrna1;Target=FBgn0033609.1 778 1086 +
Chr2	stalkie_big_nohaplotig	CDS	18505420	18505630	99	+	0	ID=FBgn0033609.1.mrna1.cds4;Name=FBgn0033609.1;Parent=FBgn0033609.1.mrna1;Target=FBgn0033609.1 1087 1297 +
Chr2	stalkie_big_nohaplotig	CDS	18505699	18505868	99	+	1	ID=FBgn0033609.1.mrna1.cds5;Name=FBgn0033609.1;Parent=FBgn0033609.1.mrna1;Target=FBgn0033609.1 1298 1467 +
Chr2	stalkie_big_nohaplotig	CDS	18505936	18506076	100	+	0	ID=FBgn0033609.1.mrna1.cds6;Name=FBgn0033609.1;Parent=FBgn0033609.1.mrna1;Target=FBgn0033609.1 1468 1608 +
Chr2	stalkie_big_nohaplotig	CDS	18506133	18506300	98	+	0	ID=FBgn0033609.1.mrna1.cds7;Name=FBgn0033609.1;Parent=FBgn0033609.1.mrna1;Target=FBgn0033609.1 1609 1776 +
Chr2	stalkie_big_nohaplotig	CDS	18506355	18506587	100	+	0	ID=FBgn0033609.1.mrna1.cds8;Name=FBgn0033609.1;Parent=FBgn0033609.1.mrna1;Target=FBgn0033609.1 1777 2009 +
Chr2	stalkie_big_nohaplotig	CDS	18506657	18506791	100	+	2	ID=FBgn0033609.1.mrna1.cds9;Name=FBgn0033609.1;Parent=FBgn0033609.1.mrna1;Target=FBgn0033609.1 2010 2144 +
Chr2	stalkie_big_nohaplotig	CDS	18506853	18507162	99	+	2	ID=FBgn0033609.1.mrna1.cds10;Name=FBgn0033609.1;Parent=FBgn0033609.1.mrna1;Target=FBgn0033609.1 2145 2454 +
ChrX	stalkie_big_nohaplotig	mRNA	59220381	59225955	.	-	.	ID=FBgn0032850.1.mrna1;Name=FBgn0032850.1;Parent=FBgn0032850.1.path1;Dir=sensecoverage=96.0;identity=99.8;matches=868;mismatches=1;indels=1;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	59225796	59225955	100	-	.	ID=FBgn0032850.1.mrna1.exon1;Name=FBgn0032850.1;Parent=FBgn0032850.1.mrna1;Target=FBgn0032850.1 37 196 +
ChrX	stalkie_big_nohaplotig	exon	59223091	59223302	100	-	.	ID=FBgn0032850.1.mrna1.exon2;Name=FBgn0032850.1;Parent=FBgn0032850.1.mrna1;Target=FBgn0032850.1 197 408 +
ChrX	stalkie_big_nohaplotig	exon	59222812	59223030	99	-	.	ID=FBgn0032850.1.mrna1.exon3;Name=FBgn0032850.1;Parent=FBgn0032850.1.mrna1;Target=FBgn0032850.1 409 627 +
ChrX	stalkie_big_nohaplotig	exon	59222033	59222202	100	-	.	ID=FBgn0032850.1.mrna1.exon4;Name=FBgn0032850.1;Parent=FBgn0032850.1.mrna1;Target=FBgn0032850.1 628 797 +
ChrX	stalkie_big_nohaplotig	exon	59220381	59220488	99	-	.	ID=FBgn0032850.1.mrna1.exon5;Name=FBgn0032850.1;Parent=FBgn0032850.1.mrna1;Target=FBgn0032850.1 798 906 +
ChrX	stalkie_big_nohaplotig	CDS	59225796	59225955	100	-	0	ID=FBgn0032850.1.mrna1.cds1;Name=FBgn0032850.1;Parent=FBgn0032850.1.mrna1;Target=FBgn0032850.1 37 196 +
ChrX	stalkie_big_nohaplotig	CDS	59223091	59223302	100	-	1	ID=FBgn0032850.1.mrna1.cds2;Name=FBgn0032850.1;Parent=FBgn0032850.1.mrna1;Target=FBgn0032850.1 197 408 +
ChrX	stalkie_big_nohaplotig	CDS	59222812	59223030	99	-	0	ID=FBgn0032850.1.mrna1.cds3;Name=FBgn0032850.1;Parent=FBgn0032850.1.mrna1;Target=FBgn0032850.1 409 627 +
ChrX	stalkie_big_nohaplotig	CDS	59222033	59222202	100	-	0	ID=FBgn0032850.1.mrna1.cds4;Name=FBgn0032850.1;Parent=FBgn0032850.1.mrna1;Target=FBgn0032850.1 628 797 +
ChrX	stalkie_big_nohaplotig	CDS	59220381	59220488	99	-	2	ID=FBgn0032850.1.mrna1.cds5;Name=FBgn0032850.1;Parent=FBgn0032850.1.mrna1;Target=FBgn0032850.1 798 906 +
ChrX	stalkie_big_nohaplotig	mRNA	59130573	59131306	.	+	.	ID=FBgn0035482.3.mrna1;Name=FBgn0035482.3;Parent=FBgn0035482.3.path1;Dir=indeterminatecoverage=99.5;identity=99.9;matches=733;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	59130573	59131306	99	+	.	ID=FBgn0035482.3.mrna1.exon1;Name=FBgn0035482.3;Parent=FBgn0035482.3.mrna1;Target=FBgn0035482.3 734 1 .
ChrX	stalkie_big_nohaplotig	CDS	59130573	59131304	99	+	0	ID=FBgn0035482.3.mrna1.cds1;Name=FBgn0035482.3;Parent=FBgn0035482.3.mrna1;Target=FBgn0035482.3 732 1 .
Chr1	stalkie_big_nohaplotig	mRNA	86761714	86763500	.	-	.	ID=FBgn0030457.1.mrna1;Name=FBgn0030457.1;Parent=FBgn0030457.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1515;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	86762528	86763500	100	-	.	ID=FBgn0030457.1.mrna1.exon1;Name=FBgn0030457.1;Parent=FBgn0030457.1.mrna1;Target=FBgn0030457.1 1 973 +
Chr1	stalkie_big_nohaplotig	exon	86762125	86762308	100	-	.	ID=FBgn0030457.1.mrna1.exon2;Name=FBgn0030457.1;Parent=FBgn0030457.1.mrna1;Target=FBgn0030457.1 974 1157 +
Chr1	stalkie_big_nohaplotig	exon	86761714	86762071	100	-	.	ID=FBgn0030457.1.mrna1.exon3;Name=FBgn0030457.1;Parent=FBgn0030457.1.mrna1;Target=FBgn0030457.1 1158 1515 +
Chr1	stalkie_big_nohaplotig	CDS	86762528	86763500	100	-	0	ID=FBgn0030457.1.mrna1.cds1;Name=FBgn0030457.1;Parent=FBgn0030457.1.mrna1;Target=FBgn0030457.1 1 973 +
Chr1	stalkie_big_nohaplotig	CDS	86762125	86762308	100	-	1	ID=FBgn0030457.1.mrna1.cds2;Name=FBgn0030457.1;Parent=FBgn0030457.1.mrna1;Target=FBgn0030457.1 974 1157 +
Chr1	stalkie_big_nohaplotig	CDS	86761714	86762071	100	-	2	ID=FBgn0030457.1.mrna1.cds3;Name=FBgn0030457.1;Parent=FBgn0030457.1.mrna1;Target=FBgn0030457.1 1158 1515 +
Chr1	stalkie_big_nohaplotig	mRNA	45956186	45957561	.	+	.	ID=FBgn0036460.1.mrna1;Name=FBgn0036460.1;Parent=FBgn0036460.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=1251;mismatches=9;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	45956186	45957047	99	+	.	ID=FBgn0036460.1.mrna1.exon1;Name=FBgn0036460.1;Parent=FBgn0036460.1.mrna1;Target=FBgn0036460.1 1 862 +
Chr1	stalkie_big_nohaplotig	exon	45957106	45957301	98	+	.	ID=FBgn0036460.1.mrna1.exon2;Name=FBgn0036460.1;Parent=FBgn0036460.1.mrna1;Target=FBgn0036460.1 863 1058 +
Chr1	stalkie_big_nohaplotig	exon	45957360	45957561	99	+	.	ID=FBgn0036460.1.mrna1.exon3;Name=FBgn0036460.1;Parent=FBgn0036460.1.mrna1;Target=FBgn0036460.1 1059 1260 +
Chr1	stalkie_big_nohaplotig	CDS	45956186	45957047	99	+	0	ID=FBgn0036460.1.mrna1.cds1;Name=FBgn0036460.1;Parent=FBgn0036460.1.mrna1;Target=FBgn0036460.1 1 862 +
Chr1	stalkie_big_nohaplotig	CDS	45957106	45957301	98	+	1	ID=FBgn0036460.1.mrna1.cds2;Name=FBgn0036460.1;Parent=FBgn0036460.1.mrna1;Target=FBgn0036460.1 863 1058 +
Chr1	stalkie_big_nohaplotig	CDS	45957360	45957561	99	+	2	ID=FBgn0036460.1.mrna1.cds3;Name=FBgn0036460.1;Parent=FBgn0036460.1.mrna1;Target=FBgn0036460.1 1059 1260 +
Chr1	stalkie_big_nohaplotig	mRNA	32020708	32023157	.	+	.	ID=FBgn0035708.1.mrna1;Name=FBgn0035708.1;Parent=FBgn0035708.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1278;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	32020708	32021169	100	+	.	ID=FBgn0035708.1.mrna1.exon1;Name=FBgn0035708.1;Parent=FBgn0035708.1.mrna1;Target=FBgn0035708.1 1 462 +
Chr1	stalkie_big_nohaplotig	exon	32021240	32021828	100	+	.	ID=FBgn0035708.1.mrna1.exon2;Name=FBgn0035708.1;Parent=FBgn0035708.1.mrna1;Target=FBgn0035708.1 463 1051 +
Chr1	stalkie_big_nohaplotig	exon	32022931	32023157	100	+	.	ID=FBgn0035708.1.mrna1.exon3;Name=FBgn0035708.1;Parent=FBgn0035708.1.mrna1;Target=FBgn0035708.1 1052 1278 +
Chr1	stalkie_big_nohaplotig	CDS	32020708	32021169	100	+	0	ID=FBgn0035708.1.mrna1.cds1;Name=FBgn0035708.1;Parent=FBgn0035708.1.mrna1;Target=FBgn0035708.1 1 462 +
Chr1	stalkie_big_nohaplotig	CDS	32021240	32021828	100	+	0	ID=FBgn0035708.1.mrna1.cds2;Name=FBgn0035708.1;Parent=FBgn0035708.1.mrna1;Target=FBgn0035708.1 463 1051 +
Chr1	stalkie_big_nohaplotig	CDS	32022931	32023157	100	+	1	ID=FBgn0035708.1.mrna1.cds3;Name=FBgn0035708.1;Parent=FBgn0035708.1.mrna1;Target=FBgn0035708.1 1052 1278 +
ChrX	stalkie_big_nohaplotig	mRNA	5556413	5557402	.	-	.	ID=ORF1818.mrna1;Name=ORF1818;Parent=ORF1818.path1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=978;mismatches=12;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	5556413	5557402	98	-	.	ID=ORF1818.mrna1.exon1;Name=ORF1818;Parent=ORF1818.mrna1;Target=ORF1818 990 1 .
ChrX	stalkie_big_nohaplotig	CDS	5556413	5557402	98	-	0	ID=ORF1818.mrna1.cds1;Name=ORF1818;Parent=ORF1818.mrna1;Target=ORF1818 990 1 .
Chr2	stalkie_big_nohaplotig	mRNA	82217428	82218750	.	+	.	ID=FBgn0038013.1.mrna1;Name=FBgn0038013.1;Parent=FBgn0038013.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=966;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	82217428	82217545	100	+	.	ID=FBgn0038013.1.mrna1.exon1;Name=FBgn0038013.1;Parent=FBgn0038013.1.mrna1;Target=FBgn0038013.1 1 118 +
Chr2	stalkie_big_nohaplotig	exon	82217610	82217725	100	+	.	ID=FBgn0038013.1.mrna1.exon2;Name=FBgn0038013.1;Parent=FBgn0038013.1.mrna1;Target=FBgn0038013.1 119 234 +
Chr2	stalkie_big_nohaplotig	exon	82217796	82217983	99	+	.	ID=FBgn0038013.1.mrna1.exon3;Name=FBgn0038013.1;Parent=FBgn0038013.1.mrna1;Target=FBgn0038013.1 235 422 +
Chr2	stalkie_big_nohaplotig	exon	82218051	82218309	99	+	.	ID=FBgn0038013.1.mrna1.exon4;Name=FBgn0038013.1;Parent=FBgn0038013.1.mrna1;Target=FBgn0038013.1 423 681 +
Chr2	stalkie_big_nohaplotig	exon	82218372	82218561	99	+	.	ID=FBgn0038013.1.mrna1.exon5;Name=FBgn0038013.1;Parent=FBgn0038013.1.mrna1;Target=FBgn0038013.1 682 871 +
Chr2	stalkie_big_nohaplotig	exon	82218653	82218750	100	+	.	ID=FBgn0038013.1.mrna1.exon6;Name=FBgn0038013.1;Parent=FBgn0038013.1.mrna1;Target=FBgn0038013.1 872 969 +
Chr2	stalkie_big_nohaplotig	CDS	82217428	82217545	100	+	0	ID=FBgn0038013.1.mrna1.cds1;Name=FBgn0038013.1;Parent=FBgn0038013.1.mrna1;Target=FBgn0038013.1 1 118 +
Chr2	stalkie_big_nohaplotig	CDS	82217610	82217725	100	+	1	ID=FBgn0038013.1.mrna1.cds2;Name=FBgn0038013.1;Parent=FBgn0038013.1.mrna1;Target=FBgn0038013.1 119 234 +
Chr2	stalkie_big_nohaplotig	CDS	82217796	82217983	99	+	0	ID=FBgn0038013.1.mrna1.cds3;Name=FBgn0038013.1;Parent=FBgn0038013.1.mrna1;Target=FBgn0038013.1 235 422 +
Chr2	stalkie_big_nohaplotig	CDS	82218051	82218309	99	+	2	ID=FBgn0038013.1.mrna1.cds4;Name=FBgn0038013.1;Parent=FBgn0038013.1.mrna1;Target=FBgn0038013.1 423 681 +
Chr2	stalkie_big_nohaplotig	CDS	82218372	82218561	99	+	0	ID=FBgn0038013.1.mrna1.cds5;Name=FBgn0038013.1;Parent=FBgn0038013.1.mrna1;Target=FBgn0038013.1 682 871 +
Chr2	stalkie_big_nohaplotig	CDS	82218653	82218750	100	+	1	ID=FBgn0038013.1.mrna1.cds6;Name=FBgn0038013.1;Parent=FBgn0038013.1.mrna1;Target=FBgn0038013.1 872 969 +
Chr2	stalkie_big_nohaplotig	mRNA	82147798	82152312	.	+	.	ID=FBgn0051098.1.mrna1;Name=FBgn0051098.1;Parent=FBgn0051098.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=1093;mismatches=8;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	82147798	82148043	99	+	.	ID=FBgn0051098.1.mrna1.exon1;Name=FBgn0051098.1;Parent=FBgn0051098.1.mrna1;Target=FBgn0051098.1 1 246 +
Chr2	stalkie_big_nohaplotig	exon	82151217	82151828	99	+	.	ID=FBgn0051098.1.mrna1.exon2;Name=FBgn0051098.1;Parent=FBgn0051098.1.mrna1;Target=FBgn0051098.1 247 858 +
Chr2	stalkie_big_nohaplotig	exon	82151986	82152202	98	+	.	ID=FBgn0051098.1.mrna1.exon3;Name=FBgn0051098.1;Parent=FBgn0051098.1.mrna1;Target=FBgn0051098.1 859 1075 +
Chr2	stalkie_big_nohaplotig	exon	82152287	82152312	96	+	.	ID=FBgn0051098.1.mrna1.exon4;Name=FBgn0051098.1;Parent=FBgn0051098.1.mrna1;Target=FBgn0051098.1 1076 1101 +
Chr2	stalkie_big_nohaplotig	CDS	82147798	82148043	99	+	0	ID=FBgn0051098.1.mrna1.cds1;Name=FBgn0051098.1;Parent=FBgn0051098.1.mrna1;Target=FBgn0051098.1 1 246 +
Chr2	stalkie_big_nohaplotig	CDS	82151217	82151828	99	+	0	ID=FBgn0051098.1.mrna1.cds2;Name=FBgn0051098.1;Parent=FBgn0051098.1.mrna1;Target=FBgn0051098.1 247 858 +
Chr2	stalkie_big_nohaplotig	CDS	82151986	82152202	98	+	0	ID=FBgn0051098.1.mrna1.cds3;Name=FBgn0051098.1;Parent=FBgn0051098.1.mrna1;Target=FBgn0051098.1 859 1075 +
Chr2	stalkie_big_nohaplotig	CDS	82152287	82152312	96	+	1	ID=FBgn0051098.1.mrna1.cds4;Name=FBgn0051098.1;Parent=FBgn0051098.1.mrna1;Target=FBgn0051098.1 1076 1101 +
ChrX	stalkie_big_nohaplotig	mRNA	31608038	31611786	.	+	.	ID=FBgn0031952.1.mrna1;Name=FBgn0031952.1;Parent=FBgn0031952.1.path1;Dir=sensecoverage=95.0;identity=100.0;matches=2066;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	31608038	31608303	100	+	.	ID=FBgn0031952.1.mrna1.exon1;Name=FBgn0031952.1;Parent=FBgn0031952.1.mrna1;Target=FBgn0031952.1 110 375 +
ChrX	stalkie_big_nohaplotig	exon	31608392	31608923	100	+	.	ID=FBgn0031952.1.mrna1.exon2;Name=FBgn0031952.1;Parent=FBgn0031952.1.mrna1;Target=FBgn0031952.1 376 907 +
ChrX	stalkie_big_nohaplotig	exon	31609045	31609183	100	+	.	ID=FBgn0031952.1.mrna1.exon3;Name=FBgn0031952.1;Parent=FBgn0031952.1.mrna1;Target=FBgn0031952.1 908 1046 +
ChrX	stalkie_big_nohaplotig	exon	31609263	31610021	100	+	.	ID=FBgn0031952.1.mrna1.exon4;Name=FBgn0031952.1;Parent=FBgn0031952.1.mrna1;Target=FBgn0031952.1 1047 1805 +
ChrX	stalkie_big_nohaplotig	exon	31611417	31611786	100	+	.	ID=FBgn0031952.1.mrna1.exon5;Name=FBgn0031952.1;Parent=FBgn0031952.1.mrna1;Target=FBgn0031952.1 1806 2175 +
ChrX	stalkie_big_nohaplotig	CDS	31608040	31608303	100	+	0	ID=FBgn0031952.1.mrna1.cds1;Name=FBgn0031952.1;Parent=FBgn0031952.1.mrna1;Target=FBgn0031952.1 112 375 +
ChrX	stalkie_big_nohaplotig	CDS	31608392	31608923	100	+	0	ID=FBgn0031952.1.mrna1.cds2;Name=FBgn0031952.1;Parent=FBgn0031952.1.mrna1;Target=FBgn0031952.1 376 907 +
ChrX	stalkie_big_nohaplotig	CDS	31609045	31609183	100	+	1	ID=FBgn0031952.1.mrna1.cds3;Name=FBgn0031952.1;Parent=FBgn0031952.1.mrna1;Target=FBgn0031952.1 908 1046 +
ChrX	stalkie_big_nohaplotig	CDS	31609263	31610021	100	+	2	ID=FBgn0031952.1.mrna1.cds4;Name=FBgn0031952.1;Parent=FBgn0031952.1.mrna1;Target=FBgn0031952.1 1047 1805 +
ChrX	stalkie_big_nohaplotig	CDS	31611417	31611786	100	+	2	ID=FBgn0031952.1.mrna1.cds5;Name=FBgn0031952.1;Parent=FBgn0031952.1.mrna1;Target=FBgn0031952.1 1806 2175 +
ChrX	stalkie_big_nohaplotig	mRNA	31636532	31648642	.	+	.	ID=FBgn0032727.1.mrna1;Name=FBgn0032727.1;Parent=FBgn0032727.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1011;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	31636532	31636706	100	+	.	ID=FBgn0032727.1.mrna1.exon1;Name=FBgn0032727.1;Parent=FBgn0032727.1.mrna1;Target=FBgn0032727.1 1 175 +
ChrX	stalkie_big_nohaplotig	exon	31645510	31645871	100	+	.	ID=FBgn0032727.1.mrna1.exon2;Name=FBgn0032727.1;Parent=FBgn0032727.1.mrna1;Target=FBgn0032727.1 176 537 +
ChrX	stalkie_big_nohaplotig	exon	31645941	31646018	100	+	.	ID=FBgn0032727.1.mrna1.exon3;Name=FBgn0032727.1;Parent=FBgn0032727.1.mrna1;Target=FBgn0032727.1 538 615 +
ChrX	stalkie_big_nohaplotig	exon	31646713	31646838	100	+	.	ID=FBgn0032727.1.mrna1.exon4;Name=FBgn0032727.1;Parent=FBgn0032727.1.mrna1;Target=FBgn0032727.1 616 741 +
ChrX	stalkie_big_nohaplotig	exon	31648373	31648642	100	+	.	ID=FBgn0032727.1.mrna1.exon5;Name=FBgn0032727.1;Parent=FBgn0032727.1.mrna1;Target=FBgn0032727.1 742 1011 +
ChrX	stalkie_big_nohaplotig	CDS	31636532	31636706	100	+	0	ID=FBgn0032727.1.mrna1.cds1;Name=FBgn0032727.1;Parent=FBgn0032727.1.mrna1;Target=FBgn0032727.1 1 175 +
ChrX	stalkie_big_nohaplotig	CDS	31645510	31645871	100	+	1	ID=FBgn0032727.1.mrna1.cds2;Name=FBgn0032727.1;Parent=FBgn0032727.1.mrna1;Target=FBgn0032727.1 176 537 +
ChrX	stalkie_big_nohaplotig	CDS	31645941	31646018	100	+	0	ID=FBgn0032727.1.mrna1.cds3;Name=FBgn0032727.1;Parent=FBgn0032727.1.mrna1;Target=FBgn0032727.1 538 615 +
ChrX	stalkie_big_nohaplotig	CDS	31646713	31646838	100	+	0	ID=FBgn0032727.1.mrna1.cds4;Name=FBgn0032727.1;Parent=FBgn0032727.1.mrna1;Target=FBgn0032727.1 616 741 +
ChrX	stalkie_big_nohaplotig	CDS	31648373	31648642	100	+	0	ID=FBgn0032727.1.mrna1.cds5;Name=FBgn0032727.1;Parent=FBgn0032727.1.mrna1;Target=FBgn0032727.1 742 1011 +
Chr2	stalkie_big_nohaplotig	mRNA	18223281	18263066	.	-	.	ID=FBgn0086676.1.mrna1;Name=FBgn0086676.1;Parent=FBgn0086676.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1782;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	18262772	18263066	100	-	.	ID=FBgn0086676.1.mrna1.exon1;Name=FBgn0086676.1;Parent=FBgn0086676.1.mrna1;Target=FBgn0086676.1 1 295 +
Chr2	stalkie_big_nohaplotig	exon	18233704	18234061	100	-	.	ID=FBgn0086676.1.mrna1.exon2;Name=FBgn0086676.1;Parent=FBgn0086676.1.mrna1;Target=FBgn0086676.1 296 653 +
Chr2	stalkie_big_nohaplotig	exon	18231104	18231430	100	-	.	ID=FBgn0086676.1.mrna1.exon3;Name=FBgn0086676.1;Parent=FBgn0086676.1.mrna1;Target=FBgn0086676.1 654 980 +
Chr2	stalkie_big_nohaplotig	exon	18230203	18230464	100	-	.	ID=FBgn0086676.1.mrna1.exon4;Name=FBgn0086676.1;Parent=FBgn0086676.1.mrna1;Target=FBgn0086676.1 981 1242 +
Chr2	stalkie_big_nohaplotig	exon	18225144	18225242	100	-	.	ID=FBgn0086676.1.mrna1.exon5;Name=FBgn0086676.1;Parent=FBgn0086676.1.mrna1;Target=FBgn0086676.1 1243 1341 +
Chr2	stalkie_big_nohaplotig	exon	18224890	18225078	100	-	.	ID=FBgn0086676.1.mrna1.exon6;Name=FBgn0086676.1;Parent=FBgn0086676.1.mrna1;Target=FBgn0086676.1 1342 1530 +
Chr2	stalkie_big_nohaplotig	exon	18223684	18223828	100	-	.	ID=FBgn0086676.1.mrna1.exon7;Name=FBgn0086676.1;Parent=FBgn0086676.1.mrna1;Target=FBgn0086676.1 1531 1675 +
Chr2	stalkie_big_nohaplotig	exon	18223281	18223387	100	-	.	ID=FBgn0086676.1.mrna1.exon8;Name=FBgn0086676.1;Parent=FBgn0086676.1.mrna1;Target=FBgn0086676.1 1676 1782 +
Chr2	stalkie_big_nohaplotig	CDS	18262772	18263066	100	-	0	ID=FBgn0086676.1.mrna1.cds1;Name=FBgn0086676.1;Parent=FBgn0086676.1.mrna1;Target=FBgn0086676.1 1 295 +
Chr2	stalkie_big_nohaplotig	CDS	18233704	18234061	100	-	1	ID=FBgn0086676.1.mrna1.cds2;Name=FBgn0086676.1;Parent=FBgn0086676.1.mrna1;Target=FBgn0086676.1 296 653 +
Chr2	stalkie_big_nohaplotig	CDS	18231104	18231430	100	-	2	ID=FBgn0086676.1.mrna1.cds3;Name=FBgn0086676.1;Parent=FBgn0086676.1.mrna1;Target=FBgn0086676.1 654 980 +
Chr2	stalkie_big_nohaplotig	CDS	18230203	18230464	100	-	2	ID=FBgn0086676.1.mrna1.cds4;Name=FBgn0086676.1;Parent=FBgn0086676.1.mrna1;Target=FBgn0086676.1 981 1242 +
Chr2	stalkie_big_nohaplotig	CDS	18225144	18225242	100	-	0	ID=FBgn0086676.1.mrna1.cds5;Name=FBgn0086676.1;Parent=FBgn0086676.1.mrna1;Target=FBgn0086676.1 1243 1341 +
Chr2	stalkie_big_nohaplotig	CDS	18224890	18225078	100	-	0	ID=FBgn0086676.1.mrna1.cds6;Name=FBgn0086676.1;Parent=FBgn0086676.1.mrna1;Target=FBgn0086676.1 1342 1530 +
Chr2	stalkie_big_nohaplotig	CDS	18223684	18223828	100	-	0	ID=FBgn0086676.1.mrna1.cds7;Name=FBgn0086676.1;Parent=FBgn0086676.1.mrna1;Target=FBgn0086676.1 1531 1675 +
Chr2	stalkie_big_nohaplotig	CDS	18223281	18223387	100	-	1	ID=FBgn0086676.1.mrna1.cds8;Name=FBgn0086676.1;Parent=FBgn0086676.1.mrna1;Target=FBgn0086676.1 1676 1782 +
Chr2	stalkie_big_nohaplotig	mRNA	18444831	18447618	.	-	.	ID=FBgn0013272.1.mrna1;Name=FBgn0013272.1;Parent=FBgn0013272.1.path1;Dir=sensecoverage=99.8;identity=100.0;matches=2530;mismatches=0;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	18447258	18447618	100	-	.	ID=FBgn0013272.1.mrna1.exon1;Name=FBgn0013272.1;Parent=FBgn0013272.1.mrna1;Target=FBgn0013272.1 5 365 +
Chr2	stalkie_big_nohaplotig	exon	18446957	18447182	100	-	.	ID=FBgn0013272.1.mrna1.exon2;Name=FBgn0013272.1;Parent=FBgn0013272.1.mrna1;Target=FBgn0013272.1 366 591 +
Chr2	stalkie_big_nohaplotig	exon	18446653	18446900	100	-	.	ID=FBgn0013272.1.mrna1.exon3;Name=FBgn0013272.1;Parent=FBgn0013272.1.mrna1;Target=FBgn0013272.1 592 839 +
Chr2	stalkie_big_nohaplotig	exon	18446255	18446585	100	-	.	ID=FBgn0013272.1.mrna1.exon4;Name=FBgn0013272.1;Parent=FBgn0013272.1.mrna1;Target=FBgn0013272.1 840 1170 +
Chr2	stalkie_big_nohaplotig	exon	18444831	18446194	99	-	.	ID=FBgn0013272.1.mrna1.exon5;Name=FBgn0013272.1;Parent=FBgn0013272.1.mrna1;Target=FBgn0013272.1 1171 2535 +
Chr2	stalkie_big_nohaplotig	CDS	18447258	18447616	100	-	0	ID=FBgn0013272.1.mrna1.cds1;Name=FBgn0013272.1;Parent=FBgn0013272.1.mrna1;Target=FBgn0013272.1 7 365 +
Chr2	stalkie_big_nohaplotig	CDS	18446957	18447182	100	-	2	ID=FBgn0013272.1.mrna1.cds2;Name=FBgn0013272.1;Parent=FBgn0013272.1.mrna1;Target=FBgn0013272.1 366 591 +
Chr2	stalkie_big_nohaplotig	CDS	18446653	18446900	100	-	0	ID=FBgn0013272.1.mrna1.cds3;Name=FBgn0013272.1;Parent=FBgn0013272.1.mrna1;Target=FBgn0013272.1 592 839 +
Chr2	stalkie_big_nohaplotig	CDS	18446255	18446585	100	-	2	ID=FBgn0013272.1.mrna1.cds4;Name=FBgn0013272.1;Parent=FBgn0013272.1.mrna1;Target=FBgn0013272.1 840 1170 +
Chr2	stalkie_big_nohaplotig	CDS	18444831	18446194	99	-	0	ID=FBgn0013272.1.mrna1.cds5;Name=FBgn0013272.1;Parent=FBgn0013272.1.mrna1;Target=FBgn0013272.1 1171 2535 +
Chr2	stalkie_big_nohaplotig	mRNA	18437294	18438968	.	-	.	ID=FBgn0017482.1.mrna1;Name=FBgn0017482.1;Parent=FBgn0017482.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1422;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	18438892	18438968	100	-	.	ID=FBgn0017482.1.mrna1.exon1;Name=FBgn0017482.1;Parent=FBgn0017482.1.mrna1;Target=FBgn0017482.1 1 77 +
Chr2	stalkie_big_nohaplotig	exon	18438726	18438813	100	-	.	ID=FBgn0017482.1.mrna1.exon2;Name=FBgn0017482.1;Parent=FBgn0017482.1.mrna1;Target=FBgn0017482.1 78 165 +
Chr2	stalkie_big_nohaplotig	exon	18438290	18438664	100	-	.	ID=FBgn0017482.1.mrna1.exon3;Name=FBgn0017482.1;Parent=FBgn0017482.1.mrna1;Target=FBgn0017482.1 166 540 +
Chr2	stalkie_big_nohaplotig	exon	18438091	18438232	100	-	.	ID=FBgn0017482.1.mrna1.exon4;Name=FBgn0017482.1;Parent=FBgn0017482.1.mrna1;Target=FBgn0017482.1 541 682 +
Chr2	stalkie_big_nohaplotig	exon	18437294	18438033	100	-	.	ID=FBgn0017482.1.mrna1.exon5;Name=FBgn0017482.1;Parent=FBgn0017482.1.mrna1;Target=FBgn0017482.1 683 1422 +
Chr2	stalkie_big_nohaplotig	CDS	18438892	18438968	100	-	0	ID=FBgn0017482.1.mrna1.cds1;Name=FBgn0017482.1;Parent=FBgn0017482.1.mrna1;Target=FBgn0017482.1 1 77 +
Chr2	stalkie_big_nohaplotig	CDS	18438726	18438813	100	-	2	ID=FBgn0017482.1.mrna1.cds2;Name=FBgn0017482.1;Parent=FBgn0017482.1.mrna1;Target=FBgn0017482.1 78 165 +
Chr2	stalkie_big_nohaplotig	CDS	18438290	18438664	100	-	0	ID=FBgn0017482.1.mrna1.cds3;Name=FBgn0017482.1;Parent=FBgn0017482.1.mrna1;Target=FBgn0017482.1 166 540 +
Chr2	stalkie_big_nohaplotig	CDS	18438091	18438232	100	-	0	ID=FBgn0017482.1.mrna1.cds4;Name=FBgn0017482.1;Parent=FBgn0017482.1.mrna1;Target=FBgn0017482.1 541 682 +
Chr2	stalkie_big_nohaplotig	CDS	18437294	18438033	100	-	1	ID=FBgn0017482.1.mrna1.cds5;Name=FBgn0017482.1;Parent=FBgn0017482.1.mrna1;Target=FBgn0017482.1 683 1422 +
Chr2	stalkie_big_nohaplotig	mRNA	18389321	18423488	.	+	.	ID=FBgn0034720.1.mrna1;Name=FBgn0034720.1;Parent=FBgn0034720.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2868;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	18389321	18389525	100	+	.	ID=FBgn0034720.1.mrna1.exon1;Name=FBgn0034720.1;Parent=FBgn0034720.1.mrna1;Target=FBgn0034720.1 1 205 +
Chr2	stalkie_big_nohaplotig	exon	18398691	18398873	100	+	.	ID=FBgn0034720.1.mrna1.exon2;Name=FBgn0034720.1;Parent=FBgn0034720.1.mrna1;Target=FBgn0034720.1 206 388 +
Chr2	stalkie_big_nohaplotig	exon	18400458	18401354	100	+	.	ID=FBgn0034720.1.mrna1.exon3;Name=FBgn0034720.1;Parent=FBgn0034720.1.mrna1;Target=FBgn0034720.1 389 1285 +
Chr2	stalkie_big_nohaplotig	exon	18401419	18401479	100	+	.	ID=FBgn0034720.1.mrna1.exon4;Name=FBgn0034720.1;Parent=FBgn0034720.1.mrna1;Target=FBgn0034720.1 1286 1346 +
Chr2	stalkie_big_nohaplotig	exon	18401546	18401733	100	+	.	ID=FBgn0034720.1.mrna1.exon5;Name=FBgn0034720.1;Parent=FBgn0034720.1.mrna1;Target=FBgn0034720.1 1347 1534 +
Chr2	stalkie_big_nohaplotig	exon	18401796	18402290	100	+	.	ID=FBgn0034720.1.mrna1.exon6;Name=FBgn0034720.1;Parent=FBgn0034720.1.mrna1;Target=FBgn0034720.1 1535 2029 +
Chr2	stalkie_big_nohaplotig	exon	18402385	18402546	100	+	.	ID=FBgn0034720.1.mrna1.exon7;Name=FBgn0034720.1;Parent=FBgn0034720.1.mrna1;Target=FBgn0034720.1 2030 2191 +
Chr2	stalkie_big_nohaplotig	exon	18402731	18402875	100	+	.	ID=FBgn0034720.1.mrna1.exon8;Name=FBgn0034720.1;Parent=FBgn0034720.1.mrna1;Target=FBgn0034720.1 2192 2336 +
Chr2	stalkie_big_nohaplotig	exon	18415009	18415120	100	+	.	ID=FBgn0034720.1.mrna1.exon9;Name=FBgn0034720.1;Parent=FBgn0034720.1.mrna1;Target=FBgn0034720.1 2337 2448 +
Chr2	stalkie_big_nohaplotig	exon	18421573	18421596	100	+	.	ID=FBgn0034720.1.mrna1.exon10;Name=FBgn0034720.1;Parent=FBgn0034720.1.mrna1;Target=FBgn0034720.1 2449 2472 +
Chr2	stalkie_big_nohaplotig	exon	18423093	18423488	100	+	.	ID=FBgn0034720.1.mrna1.exon11;Name=FBgn0034720.1;Parent=FBgn0034720.1.mrna1;Target=FBgn0034720.1 2473 2868 +
Chr2	stalkie_big_nohaplotig	CDS	18389321	18389525	100	+	0	ID=FBgn0034720.1.mrna1.cds1;Name=FBgn0034720.1;Parent=FBgn0034720.1.mrna1;Target=FBgn0034720.1 1 205 +
Chr2	stalkie_big_nohaplotig	CDS	18398691	18398873	100	+	1	ID=FBgn0034720.1.mrna1.cds2;Name=FBgn0034720.1;Parent=FBgn0034720.1.mrna1;Target=FBgn0034720.1 206 388 +
Chr2	stalkie_big_nohaplotig	CDS	18400458	18401354	100	+	1	ID=FBgn0034720.1.mrna1.cds3;Name=FBgn0034720.1;Parent=FBgn0034720.1.mrna1;Target=FBgn0034720.1 389 1285 +
Chr2	stalkie_big_nohaplotig	CDS	18401419	18401479	100	+	1	ID=FBgn0034720.1.mrna1.cds4;Name=FBgn0034720.1;Parent=FBgn0034720.1.mrna1;Target=FBgn0034720.1 1286 1346 +
Chr2	stalkie_big_nohaplotig	CDS	18401546	18401733	100	+	2	ID=FBgn0034720.1.mrna1.cds5;Name=FBgn0034720.1;Parent=FBgn0034720.1.mrna1;Target=FBgn0034720.1 1347 1534 +
Chr2	stalkie_big_nohaplotig	CDS	18401796	18402290	100	+	1	ID=FBgn0034720.1.mrna1.cds6;Name=FBgn0034720.1;Parent=FBgn0034720.1.mrna1;Target=FBgn0034720.1 1535 2029 +
Chr2	stalkie_big_nohaplotig	CDS	18402385	18402546	100	+	1	ID=FBgn0034720.1.mrna1.cds7;Name=FBgn0034720.1;Parent=FBgn0034720.1.mrna1;Target=FBgn0034720.1 2030 2191 +
Chr2	stalkie_big_nohaplotig	CDS	18402731	18402875	100	+	1	ID=FBgn0034720.1.mrna1.cds8;Name=FBgn0034720.1;Parent=FBgn0034720.1.mrna1;Target=FBgn0034720.1 2192 2336 +
Chr2	stalkie_big_nohaplotig	CDS	18415009	18415120	100	+	2	ID=FBgn0034720.1.mrna1.cds9;Name=FBgn0034720.1;Parent=FBgn0034720.1.mrna1;Target=FBgn0034720.1 2337 2448 +
Chr2	stalkie_big_nohaplotig	CDS	18421573	18421596	100	+	0	ID=FBgn0034720.1.mrna1.cds10;Name=FBgn0034720.1;Parent=FBgn0034720.1.mrna1;Target=FBgn0034720.1 2449 2472 +
Chr2	stalkie_big_nohaplotig	CDS	18423093	18423488	100	+	0	ID=FBgn0034720.1.mrna1.cds11;Name=FBgn0034720.1;Parent=FBgn0034720.1.mrna1;Target=FBgn0034720.1 2473 2868 +
Chr2	stalkie_big_nohaplotig	mRNA	145478885	145482246	.	+	.	ID=FBgn0019990.mrna1;Name=FBgn0019990;Parent=FBgn0019990.path1;Dir=sensecoverage=100.0;identity=99.6;matches=2085;mismatches=9;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	145478885	145478974	100	+	.	ID=FBgn0019990.mrna1.exon1;Name=FBgn0019990;Parent=FBgn0019990.mrna1;Target=FBgn0019990 1 90 +
Chr2	stalkie_big_nohaplotig	exon	145479907	145480091	98	+	.	ID=FBgn0019990.mrna1.exon2;Name=FBgn0019990;Parent=FBgn0019990.mrna1;Target=FBgn0019990 91 275 +
Chr2	stalkie_big_nohaplotig	exon	145480164	145480654	99	+	.	ID=FBgn0019990.mrna1.exon3;Name=FBgn0019990;Parent=FBgn0019990.mrna1;Target=FBgn0019990 276 766 +
Chr2	stalkie_big_nohaplotig	exon	145480725	145481355	99	+	.	ID=FBgn0019990.mrna1.exon4;Name=FBgn0019990;Parent=FBgn0019990.mrna1;Target=FBgn0019990 767 1397 +
Chr2	stalkie_big_nohaplotig	exon	145481416	145481896	99	+	.	ID=FBgn0019990.mrna1.exon5;Name=FBgn0019990;Parent=FBgn0019990.mrna1;Target=FBgn0019990 1398 1878 +
Chr2	stalkie_big_nohaplotig	exon	145481960	145482081	100	+	.	ID=FBgn0019990.mrna1.exon6;Name=FBgn0019990;Parent=FBgn0019990.mrna1;Target=FBgn0019990 1879 2000 +
Chr2	stalkie_big_nohaplotig	exon	145482153	145482246	100	+	.	ID=FBgn0019990.mrna1.exon7;Name=FBgn0019990;Parent=FBgn0019990.mrna1;Target=FBgn0019990 2001 2094 +
Chr2	stalkie_big_nohaplotig	CDS	145478885	145478974	100	+	0	ID=FBgn0019990.mrna1.cds1;Name=FBgn0019990;Parent=FBgn0019990.mrna1;Target=FBgn0019990 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	145479907	145480091	98	+	0	ID=FBgn0019990.mrna1.cds2;Name=FBgn0019990;Parent=FBgn0019990.mrna1;Target=FBgn0019990 91 275 +
Chr2	stalkie_big_nohaplotig	CDS	145480164	145480654	99	+	2	ID=FBgn0019990.mrna1.cds3;Name=FBgn0019990;Parent=FBgn0019990.mrna1;Target=FBgn0019990 276 766 +
Chr2	stalkie_big_nohaplotig	CDS	145480725	145481355	99	+	1	ID=FBgn0019990.mrna1.cds4;Name=FBgn0019990;Parent=FBgn0019990.mrna1;Target=FBgn0019990 767 1397 +
Chr2	stalkie_big_nohaplotig	CDS	145481416	145481896	99	+	2	ID=FBgn0019990.mrna1.cds5;Name=FBgn0019990;Parent=FBgn0019990.mrna1;Target=FBgn0019990 1398 1878 +
Chr2	stalkie_big_nohaplotig	CDS	145481960	145482081	100	+	0	ID=FBgn0019990.mrna1.cds6;Name=FBgn0019990;Parent=FBgn0019990.mrna1;Target=FBgn0019990 1879 2000 +
Chr2	stalkie_big_nohaplotig	CDS	145482153	145482246	100	+	2	ID=FBgn0019990.mrna1.cds7;Name=FBgn0019990;Parent=FBgn0019990.mrna1;Target=FBgn0019990 2001 2094 +
Chr2	stalkie_big_nohaplotig	mRNA	60754177	60755331	.	-	.	ID=FBgn0034394.6.mrna1;Name=FBgn0034394.6;Parent=FBgn0034394.6.path1;Dir=sensecoverage=99.4;identity=98.3;matches=1075;mismatches=18;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	60754298	60755331	98	-	.	ID=FBgn0034394.6.mrna1.exon1;Name=FBgn0034394.6;Parent=FBgn0034394.6.mrna1;Target=FBgn0034394.6 1 1035 +
Chr2	stalkie_big_nohaplotig	exon	60754177	60754235	96	-	.	ID=FBgn0034394.6.mrna1.exon2;Name=FBgn0034394.6;Parent=FBgn0034394.6.mrna1;Target=FBgn0034394.6 1036 1094 +
Chr2	stalkie_big_nohaplotig	CDS	60755262	60755329	97	-	0	ID=FBgn0034394.6.mrna1.cds1;Name=FBgn0034394.6;Parent=FBgn0034394.6.mrna1;Target=FBgn0034394.6 3 71 +
Chr2	stalkie_big_nohaplotig	mRNA	157952369	157955381	.	+	.	ID=FBgn0000139.1.mrna1;Name=FBgn0000139.1;Parent=FBgn0000139.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1673;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	157952369	157952493	100	+	.	ID=FBgn0000139.1.mrna1.exon1;Name=FBgn0000139.1;Parent=FBgn0000139.1.mrna1;Target=FBgn0000139.1 1 125 +
Chr2	stalkie_big_nohaplotig	exon	157952550	157952728	100	+	.	ID=FBgn0000139.1.mrna1.exon2;Name=FBgn0000139.1;Parent=FBgn0000139.1.mrna1;Target=FBgn0000139.1 126 304 +
Chr2	stalkie_big_nohaplotig	exon	157952794	157952956	100	+	.	ID=FBgn0000139.1.mrna1.exon3;Name=FBgn0000139.1;Parent=FBgn0000139.1.mrna1;Target=FBgn0000139.1 305 467 +
Chr2	stalkie_big_nohaplotig	exon	157953018	157953199	100	+	.	ID=FBgn0000139.1.mrna1.exon4;Name=FBgn0000139.1;Parent=FBgn0000139.1.mrna1;Target=FBgn0000139.1 468 649 +
Chr2	stalkie_big_nohaplotig	exon	157954159	157954542	99	+	.	ID=FBgn0000139.1.mrna1.exon5;Name=FBgn0000139.1;Parent=FBgn0000139.1.mrna1;Target=FBgn0000139.1 650 1033 +
Chr2	stalkie_big_nohaplotig	exon	157954615	157954895	100	+	.	ID=FBgn0000139.1.mrna1.exon6;Name=FBgn0000139.1;Parent=FBgn0000139.1.mrna1;Target=FBgn0000139.1 1034 1314 +
Chr2	stalkie_big_nohaplotig	exon	157954960	157955217	100	+	.	ID=FBgn0000139.1.mrna1.exon7;Name=FBgn0000139.1;Parent=FBgn0000139.1.mrna1;Target=FBgn0000139.1 1315 1572 +
Chr2	stalkie_big_nohaplotig	exon	157955280	157955381	100	+	.	ID=FBgn0000139.1.mrna1.exon8;Name=FBgn0000139.1;Parent=FBgn0000139.1.mrna1;Target=FBgn0000139.1 1573 1674 +
Chr2	stalkie_big_nohaplotig	CDS	157952369	157952493	100	+	0	ID=FBgn0000139.1.mrna1.cds1;Name=FBgn0000139.1;Parent=FBgn0000139.1.mrna1;Target=FBgn0000139.1 1 125 +
Chr2	stalkie_big_nohaplotig	CDS	157952550	157952728	100	+	2	ID=FBgn0000139.1.mrna1.cds2;Name=FBgn0000139.1;Parent=FBgn0000139.1.mrna1;Target=FBgn0000139.1 126 304 +
Chr2	stalkie_big_nohaplotig	CDS	157952794	157952956	100	+	1	ID=FBgn0000139.1.mrna1.cds3;Name=FBgn0000139.1;Parent=FBgn0000139.1.mrna1;Target=FBgn0000139.1 305 467 +
Chr2	stalkie_big_nohaplotig	CDS	157953018	157953199	100	+	2	ID=FBgn0000139.1.mrna1.cds4;Name=FBgn0000139.1;Parent=FBgn0000139.1.mrna1;Target=FBgn0000139.1 468 649 +
Chr2	stalkie_big_nohaplotig	CDS	157954159	157954542	99	+	1	ID=FBgn0000139.1.mrna1.cds5;Name=FBgn0000139.1;Parent=FBgn0000139.1.mrna1;Target=FBgn0000139.1 650 1033 +
Chr2	stalkie_big_nohaplotig	CDS	157954615	157954895	100	+	1	ID=FBgn0000139.1.mrna1.cds6;Name=FBgn0000139.1;Parent=FBgn0000139.1.mrna1;Target=FBgn0000139.1 1034 1314 +
Chr2	stalkie_big_nohaplotig	CDS	157954960	157955217	100	+	0	ID=FBgn0000139.1.mrna1.cds7;Name=FBgn0000139.1;Parent=FBgn0000139.1.mrna1;Target=FBgn0000139.1 1315 1572 +
Chr2	stalkie_big_nohaplotig	CDS	157955280	157955381	100	+	0	ID=FBgn0000139.1.mrna1.cds8;Name=FBgn0000139.1;Parent=FBgn0000139.1.mrna1;Target=FBgn0000139.1 1573 1674 +
Chr2	stalkie_big_nohaplotig	mRNA	157946196	157948717	.	-	.	ID=FBgn0039637.1.mrna1;Name=FBgn0039637.1;Parent=FBgn0039637.1.path1;Dir=sensecoverage=99.9;identity=100.0;matches=2385;mismatches=1;indels=0;unknowns=9
Chr2	stalkie_big_nohaplotig	exon	157948372	157948717	99	-	.	ID=FBgn0039637.1.mrna1.exon1;Name=FBgn0039637.1;Parent=FBgn0039637.1.mrna1;Target=FBgn0039637.1 3 348 +
Chr2	stalkie_big_nohaplotig	exon	157947284	157948303	100	-	.	ID=FBgn0039637.1.mrna1.exon2;Name=FBgn0039637.1;Parent=FBgn0039637.1.mrna1;Target=FBgn0039637.1 349 1368 +
Chr2	stalkie_big_nohaplotig	exon	157946196	157947224	100	-	.	ID=FBgn0039637.1.mrna1.exon3;Name=FBgn0039637.1;Parent=FBgn0039637.1.mrna1;Target=FBgn0039637.1 1369 2397 +
Chr2	stalkie_big_nohaplotig	CDS	157948372	157948716	99	-	0	ID=FBgn0039637.1.mrna1.cds1;Name=FBgn0039637.1;Parent=FBgn0039637.1.mrna1;Target=FBgn0039637.1 4 348 +
Chr2	stalkie_big_nohaplotig	CDS	157947284	157948303	100	-	0	ID=FBgn0039637.1.mrna1.cds2;Name=FBgn0039637.1;Parent=FBgn0039637.1.mrna1;Target=FBgn0039637.1 349 1368 +
Chr2	stalkie_big_nohaplotig	CDS	157946196	157947224	100	-	0	ID=FBgn0039637.1.mrna1.cds3;Name=FBgn0039637.1;Parent=FBgn0039637.1.mrna1;Target=FBgn0039637.1 1369 2397 +
ChrX	stalkie_big_nohaplotig	mRNA	58140303	58141798	.	+	.	ID=ORF1437.mrna1;Name=ORF1437;Parent=ORF1437.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1103;mismatches=0;indels=1;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	58140303	58140356	100	+	.	ID=ORF1437.mrna1.exon1;Name=ORF1437;Parent=ORF1437.mrna1;Target=ORF1437 1 54 +
ChrX	stalkie_big_nohaplotig	exon	58140412	58140540	99	+	.	ID=ORF1437.mrna1.exon2;Name=ORF1437;Parent=ORF1437.mrna1;Target=ORF1437 55 184 +
ChrX	stalkie_big_nohaplotig	exon	58140645	58140719	100	+	.	ID=ORF1437.mrna1.exon3;Name=ORF1437;Parent=ORF1437.mrna1;Target=ORF1437 185 259 +
ChrX	stalkie_big_nohaplotig	exon	58140774	58140911	100	+	.	ID=ORF1437.mrna1.exon4;Name=ORF1437;Parent=ORF1437.mrna1;Target=ORF1437 260 397 +
ChrX	stalkie_big_nohaplotig	exon	58140966	58141413	100	+	.	ID=ORF1437.mrna1.exon5;Name=ORF1437;Parent=ORF1437.mrna1;Target=ORF1437 398 845 +
ChrX	stalkie_big_nohaplotig	exon	58141477	58141605	100	+	.	ID=ORF1437.mrna1.exon6;Name=ORF1437;Parent=ORF1437.mrna1;Target=ORF1437 846 974 +
ChrX	stalkie_big_nohaplotig	exon	58141669	58141798	100	+	.	ID=ORF1437.mrna1.exon7;Name=ORF1437;Parent=ORF1437.mrna1;Target=ORF1437 975 1104 +
ChrX	stalkie_big_nohaplotig	CDS	58140305	58140356	100	+	0	ID=ORF1437.mrna1.cds1;Name=ORF1437;Parent=ORF1437.mrna1;Target=ORF1437 3 54 +
ChrX	stalkie_big_nohaplotig	CDS	58140412	58140540	99	+	1	ID=ORF1437.mrna1.cds2;Name=ORF1437;Parent=ORF1437.mrna1;Target=ORF1437 55 184 +
ChrX	stalkie_big_nohaplotig	CDS	58140645	58140693	100	+	2	ID=ORF1437.mrna1.cds3;Name=ORF1437;Parent=ORF1437.mrna1;Target=ORF1437 185 233 +
ChrX	stalkie_big_nohaplotig	mRNA	58137384	58139768	.	+	.	ID=ORF1570.mrna1;Name=ORF1570;Parent=ORF1570.path1;Dir=sensecoverage=99.8;identity=91.6;matches=971;mismatches=86;indels=3;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	58137384	58137597	100	+	.	ID=ORF1570.mrna1.exon1;Name=ORF1570;Parent=ORF1570.mrna1;Target=ORF1570 1 214 +
ChrX	stalkie_big_nohaplotig	exon	58137652	58137789	86	+	.	ID=ORF1570.mrna1.exon2;Name=ORF1570;Parent=ORF1570.mrna1;Target=ORF1570 215 352 +
ChrX	stalkie_big_nohaplotig	exon	58138351	58138653	88	+	.	ID=ORF1570.mrna1.exon3;Name=ORF1570;Parent=ORF1570.mrna1;Target=ORF1570 353 655 +
ChrX	stalkie_big_nohaplotig	exon	58139277	58139414	89	+	.	ID=ORF1570.mrna1.exon4;Name=ORF1570;Parent=ORF1570.mrna1;Target=ORF1570 656 793 +
ChrX	stalkie_big_nohaplotig	exon	58139502	58139768	92	+	.	ID=ORF1570.mrna1.exon5;Name=ORF1570;Parent=ORF1570.mrna1;Target=ORF1570 794 1057 +
ChrX	stalkie_big_nohaplotig	CDS	58137384	58137597	100	+	0	ID=ORF1570.mrna1.cds1;Name=ORF1570;Parent=ORF1570.mrna1;Target=ORF1570 1 214 +
ChrX	stalkie_big_nohaplotig	CDS	58137652	58137789	86	+	1	ID=ORF1570.mrna1.cds2;Name=ORF1570;Parent=ORF1570.mrna1;Target=ORF1570 215 352 +
ChrX	stalkie_big_nohaplotig	CDS	58138351	58138653	88	+	1	ID=ORF1570.mrna1.cds3;Name=ORF1570;Parent=ORF1570.mrna1;Target=ORF1570 353 655 +
ChrX	stalkie_big_nohaplotig	CDS	58139277	58139414	89	+	1	ID=ORF1570.mrna1.cds4;Name=ORF1570;Parent=ORF1570.mrna1;Target=ORF1570 656 793 +
ChrX	stalkie_big_nohaplotig	CDS	58139502	58139767	92	+	1	ID=ORF1570.mrna1.cds5;Name=ORF1570;Parent=ORF1570.mrna1;Target=ORF1570 794 1056 +
Chr1	stalkie_big_nohaplotig	mRNA	4519734	4588220	.	+	.	ID=FBgn0052369.1.mrna1;Name=FBgn0052369.1;Parent=FBgn0052369.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2334;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	4519734	4520115	100	+	.	ID=FBgn0052369.1.mrna1.exon1;Name=FBgn0052369.1;Parent=FBgn0052369.1.mrna1;Target=FBgn0052369.1 1 382 +
Chr1	stalkie_big_nohaplotig	exon	4581627	4581745	100	+	.	ID=FBgn0052369.1.mrna1.exon2;Name=FBgn0052369.1;Parent=FBgn0052369.1.mrna1;Target=FBgn0052369.1 383 501 +
Chr1	stalkie_big_nohaplotig	exon	4583311	4583448	100	+	.	ID=FBgn0052369.1.mrna1.exon3;Name=FBgn0052369.1;Parent=FBgn0052369.1.mrna1;Target=FBgn0052369.1 502 639 +
Chr1	stalkie_big_nohaplotig	exon	4583650	4584082	100	+	.	ID=FBgn0052369.1.mrna1.exon4;Name=FBgn0052369.1;Parent=FBgn0052369.1.mrna1;Target=FBgn0052369.1 640 1072 +
Chr1	stalkie_big_nohaplotig	exon	4584142	4585040	100	+	.	ID=FBgn0052369.1.mrna1.exon5;Name=FBgn0052369.1;Parent=FBgn0052369.1.mrna1;Target=FBgn0052369.1 1073 1971 +
Chr1	stalkie_big_nohaplotig	exon	4587858	4588220	100	+	.	ID=FBgn0052369.1.mrna1.exon6;Name=FBgn0052369.1;Parent=FBgn0052369.1.mrna1;Target=FBgn0052369.1 1972 2334 +
Chr1	stalkie_big_nohaplotig	CDS	4519734	4520115	100	+	0	ID=FBgn0052369.1.mrna1.cds1;Name=FBgn0052369.1;Parent=FBgn0052369.1.mrna1;Target=FBgn0052369.1 1 382 +
Chr1	stalkie_big_nohaplotig	CDS	4581627	4581745	100	+	1	ID=FBgn0052369.1.mrna1.cds2;Name=FBgn0052369.1;Parent=FBgn0052369.1.mrna1;Target=FBgn0052369.1 383 501 +
Chr1	stalkie_big_nohaplotig	CDS	4583311	4583448	100	+	0	ID=FBgn0052369.1.mrna1.cds3;Name=FBgn0052369.1;Parent=FBgn0052369.1.mrna1;Target=FBgn0052369.1 502 639 +
Chr1	stalkie_big_nohaplotig	CDS	4583650	4584082	100	+	0	ID=FBgn0052369.1.mrna1.cds4;Name=FBgn0052369.1;Parent=FBgn0052369.1.mrna1;Target=FBgn0052369.1 640 1072 +
Chr1	stalkie_big_nohaplotig	CDS	4584142	4585040	100	+	1	ID=FBgn0052369.1.mrna1.cds5;Name=FBgn0052369.1;Parent=FBgn0052369.1.mrna1;Target=FBgn0052369.1 1073 1971 +
Chr1	stalkie_big_nohaplotig	CDS	4587858	4588220	100	+	0	ID=FBgn0052369.1.mrna1.cds6;Name=FBgn0052369.1;Parent=FBgn0052369.1.mrna1;Target=FBgn0052369.1 1972 2334 +
Chr2	stalkie_big_nohaplotig	mRNA	62596007	62598823	.	-	.	ID=ORF892.mrna1;Name=ORF892;Parent=ORF892.path1;Dir=sensecoverage=22.5;identity=98.7;matches=302;mismatches=4;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	62598707	62598823	99	-	.	ID=ORF892.mrna1.exon1;Name=ORF892;Parent=ORF892.mrna1;Target=ORF892 1 117 +
Chr2	stalkie_big_nohaplotig	exon	62598190	62598216	100	-	.	ID=ORF892.mrna1.exon2;Name=ORF892;Parent=ORF892.mrna1;Target=ORF892 118 144 +
Chr2	stalkie_big_nohaplotig	exon	62597273	62597302	100	-	.	ID=ORF892.mrna1.exon3;Name=ORF892;Parent=ORF892.mrna1;Target=ORF892 145 174 +
Chr2	stalkie_big_nohaplotig	exon	62596708	62596734	100	-	.	ID=ORF892.mrna1.exon4;Name=ORF892;Parent=ORF892.mrna1;Target=ORF892 175 201 +
Chr2	stalkie_big_nohaplotig	exon	62596602	62596634	100	-	.	ID=ORF892.mrna1.exon5;Name=ORF892;Parent=ORF892.mrna1;Target=ORF892 202 234 +
Chr2	stalkie_big_nohaplotig	exon	62596007	62596078	95	-	.	ID=ORF892.mrna1.exon6;Name=ORF892;Parent=ORF892.mrna1;Target=ORF892 235 306 +
Chr2	stalkie_big_nohaplotig	CDS	62598707	62598823	99	-	0	ID=ORF892.mrna1.cds1;Name=ORF892;Parent=ORF892.mrna1;Target=ORF892 1 117 +
Chr2	stalkie_big_nohaplotig	CDS	62598190	62598216	100	-	0	ID=ORF892.mrna1.cds2;Name=ORF892;Parent=ORF892.mrna1;Target=ORF892 118 144 +
Chr2	stalkie_big_nohaplotig	CDS	62597273	62597302	100	-	0	ID=ORF892.mrna1.cds3;Name=ORF892;Parent=ORF892.mrna1;Target=ORF892 145 174 +
Chr2	stalkie_big_nohaplotig	CDS	62596708	62596734	100	-	0	ID=ORF892.mrna1.cds4;Name=ORF892;Parent=ORF892.mrna1;Target=ORF892 175 201 +
Chr2	stalkie_big_nohaplotig	CDS	62596602	62596634	100	-	0	ID=ORF892.mrna1.cds5;Name=ORF892;Parent=ORF892.mrna1;Target=ORF892 202 234 +
Chr2	stalkie_big_nohaplotig	CDS	62596007	62596078	95	-	0	ID=ORF892.mrna1.cds6;Name=ORF892;Parent=ORF892.mrna1;Target=ORF892 235 306 +
Chr1	stalkie_big_nohaplotig	mRNA	18078638	18086281	.	+	.	ID=ORF892.mrna2;Name=ORF892;Parent=ORF892.path2;Dir=sensecoverage=77.5;identity=98.9;matches=1044;mismatches=12;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	18078638	18078694	100	+	.	ID=ORF892.mrna2.exon1;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 307 363 +
Chr1	stalkie_big_nohaplotig	exon	18079376	18079468	97	+	.	ID=ORF892.mrna2.exon2;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 364 456 +
Chr1	stalkie_big_nohaplotig	exon	18079549	18079587	97	+	.	ID=ORF892.mrna2.exon3;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 457 495 +
Chr1	stalkie_big_nohaplotig	exon	18079866	18079967	100	+	.	ID=ORF892.mrna2.exon4;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 496 597 +
Chr1	stalkie_big_nohaplotig	exon	18080054	18080134	100	+	.	ID=ORF892.mrna2.exon5;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 598 678 +
Chr1	stalkie_big_nohaplotig	exon	18081364	18081465	100	+	.	ID=ORF892.mrna2.exon6;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 679 780 +
Chr1	stalkie_big_nohaplotig	exon	18081565	18081615	100	+	.	ID=ORF892.mrna2.exon7;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 781 831 +
Chr1	stalkie_big_nohaplotig	exon	18082304	18082423	99	+	.	ID=ORF892.mrna2.exon8;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 832 951 +
Chr1	stalkie_big_nohaplotig	exon	18082509	18082565	100	+	.	ID=ORF892.mrna2.exon9;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 952 1008 +
Chr1	stalkie_big_nohaplotig	exon	18082823	18082903	100	+	.	ID=ORF892.mrna2.exon10;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 1009 1089 +
Chr1	stalkie_big_nohaplotig	exon	18084728	18084805	97	+	.	ID=ORF892.mrna2.exon11;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 1090 1167 +
Chr1	stalkie_big_nohaplotig	exon	18085072	18085167	100	+	.	ID=ORF892.mrna2.exon12;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 1168 1263 +
Chr1	stalkie_big_nohaplotig	exon	18086183	18086281	93	+	.	ID=ORF892.mrna2.exon13;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 1264 1362 +
Chr1	stalkie_big_nohaplotig	CDS	18078638	18078694	100	+	0	ID=ORF892.mrna2.cds1;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 307 363 +
Chr1	stalkie_big_nohaplotig	CDS	18079376	18079468	97	+	0	ID=ORF892.mrna2.cds2;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 364 456 +
Chr1	stalkie_big_nohaplotig	CDS	18079549	18079587	97	+	0	ID=ORF892.mrna2.cds3;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 457 495 +
Chr1	stalkie_big_nohaplotig	CDS	18079866	18079967	100	+	0	ID=ORF892.mrna2.cds4;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 496 597 +
Chr1	stalkie_big_nohaplotig	CDS	18080054	18080134	100	+	0	ID=ORF892.mrna2.cds5;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 598 678 +
Chr1	stalkie_big_nohaplotig	CDS	18081364	18081465	100	+	0	ID=ORF892.mrna2.cds6;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 679 780 +
Chr1	stalkie_big_nohaplotig	CDS	18081565	18081615	100	+	0	ID=ORF892.mrna2.cds7;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 781 831 +
Chr1	stalkie_big_nohaplotig	CDS	18082304	18082423	99	+	0	ID=ORF892.mrna2.cds8;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 832 951 +
Chr1	stalkie_big_nohaplotig	CDS	18082509	18082565	100	+	0	ID=ORF892.mrna2.cds9;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 952 1008 +
Chr1	stalkie_big_nohaplotig	CDS	18082823	18082903	100	+	0	ID=ORF892.mrna2.cds10;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 1009 1089 +
Chr1	stalkie_big_nohaplotig	CDS	18084728	18084805	97	+	0	ID=ORF892.mrna2.cds11;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 1090 1167 +
Chr1	stalkie_big_nohaplotig	CDS	18085072	18085167	100	+	0	ID=ORF892.mrna2.cds12;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 1168 1263 +
Chr1	stalkie_big_nohaplotig	CDS	18086183	18086281	93	+	0	ID=ORF892.mrna2.cds13;Name=ORF892;Parent=ORF892.mrna2;Target=ORF892 1264 1362 +
ChrX	stalkie_big_nohaplotig	mRNA	50950553	50970992	.	-	.	ID=FBgn0031765.1.mrna1;Name=FBgn0031765.1;Parent=FBgn0031765.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=2052;mismatches=3;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	50970924	50970992	100	-	.	ID=FBgn0031765.1.mrna1.exon1;Name=FBgn0031765.1;Parent=FBgn0031765.1.mrna1;Target=FBgn0031765.1 1 69 +
ChrX	stalkie_big_nohaplotig	exon	50962518	50962593	100	-	.	ID=FBgn0031765.1.mrna1.exon2;Name=FBgn0031765.1;Parent=FBgn0031765.1.mrna1;Target=FBgn0031765.1 70 145 +
ChrX	stalkie_big_nohaplotig	exon	50958994	50959298	100	-	.	ID=FBgn0031765.1.mrna1.exon3;Name=FBgn0031765.1;Parent=FBgn0031765.1.mrna1;Target=FBgn0031765.1 146 450 +
ChrX	stalkie_big_nohaplotig	exon	50956177	50956313	99	-	.	ID=FBgn0031765.1.mrna1.exon4;Name=FBgn0031765.1;Parent=FBgn0031765.1.mrna1;Target=FBgn0031765.1 451 587 +
ChrX	stalkie_big_nohaplotig	exon	50955268	50955859	99	-	.	ID=FBgn0031765.1.mrna1.exon5;Name=FBgn0031765.1;Parent=FBgn0031765.1.mrna1;Target=FBgn0031765.1 588 1179 +
ChrX	stalkie_big_nohaplotig	exon	50954112	50954244	100	-	.	ID=FBgn0031765.1.mrna1.exon6;Name=FBgn0031765.1;Parent=FBgn0031765.1.mrna1;Target=FBgn0031765.1 1180 1312 +
ChrX	stalkie_big_nohaplotig	exon	50953247	50953460	99	-	.	ID=FBgn0031765.1.mrna1.exon7;Name=FBgn0031765.1;Parent=FBgn0031765.1.mrna1;Target=FBgn0031765.1 1313 1526 +
ChrX	stalkie_big_nohaplotig	exon	50950970	50951234	100	-	.	ID=FBgn0031765.1.mrna1.exon8;Name=FBgn0031765.1;Parent=FBgn0031765.1.mrna1;Target=FBgn0031765.1 1527 1791 +
ChrX	stalkie_big_nohaplotig	exon	50950553	50950816	100	-	.	ID=FBgn0031765.1.mrna1.exon9;Name=FBgn0031765.1;Parent=FBgn0031765.1.mrna1;Target=FBgn0031765.1 1792 2055 +
ChrX	stalkie_big_nohaplotig	CDS	50970924	50970992	100	-	0	ID=FBgn0031765.1.mrna1.cds1;Name=FBgn0031765.1;Parent=FBgn0031765.1.mrna1;Target=FBgn0031765.1 1 69 +
ChrX	stalkie_big_nohaplotig	CDS	50962518	50962593	100	-	0	ID=FBgn0031765.1.mrna1.cds2;Name=FBgn0031765.1;Parent=FBgn0031765.1.mrna1;Target=FBgn0031765.1 70 145 +
ChrX	stalkie_big_nohaplotig	CDS	50958994	50959298	100	-	1	ID=FBgn0031765.1.mrna1.cds3;Name=FBgn0031765.1;Parent=FBgn0031765.1.mrna1;Target=FBgn0031765.1 146 450 +
ChrX	stalkie_big_nohaplotig	CDS	50956177	50956313	99	-	0	ID=FBgn0031765.1.mrna1.cds4;Name=FBgn0031765.1;Parent=FBgn0031765.1.mrna1;Target=FBgn0031765.1 451 587 +
ChrX	stalkie_big_nohaplotig	CDS	50955268	50955859	99	-	2	ID=FBgn0031765.1.mrna1.cds5;Name=FBgn0031765.1;Parent=FBgn0031765.1.mrna1;Target=FBgn0031765.1 588 1179 +
ChrX	stalkie_big_nohaplotig	CDS	50954112	50954244	100	-	0	ID=FBgn0031765.1.mrna1.cds6;Name=FBgn0031765.1;Parent=FBgn0031765.1.mrna1;Target=FBgn0031765.1 1180 1312 +
ChrX	stalkie_big_nohaplotig	CDS	50953247	50953460	99	-	1	ID=FBgn0031765.1.mrna1.cds7;Name=FBgn0031765.1;Parent=FBgn0031765.1.mrna1;Target=FBgn0031765.1 1313 1526 +
ChrX	stalkie_big_nohaplotig	CDS	50950970	50951234	100	-	2	ID=FBgn0031765.1.mrna1.cds8;Name=FBgn0031765.1;Parent=FBgn0031765.1.mrna1;Target=FBgn0031765.1 1527 1791 +
ChrX	stalkie_big_nohaplotig	CDS	50950553	50950816	100	-	0	ID=FBgn0031765.1.mrna1.cds9;Name=FBgn0031765.1;Parent=FBgn0031765.1.mrna1;Target=FBgn0031765.1 1792 2055 +
ChrX	stalkie_big_nohaplotig	mRNA	51299408	51300945	.	+	.	ID=FBgn0032079.1.mrna1;Name=FBgn0032079.1;Parent=FBgn0032079.1.path1;Dir=indeterminatecoverage=99.9;identity=100.0;matches=1538;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	51299408	51300945	100	+	.	ID=FBgn0032079.1.mrna1.exon1;Name=FBgn0032079.1;Parent=FBgn0032079.1.mrna1;Target=FBgn0032079.1 1539 2 .
ChrX	stalkie_big_nohaplotig	CDS	51299410	51300945	100	+	0	ID=FBgn0032079.1.mrna1.cds1;Name=FBgn0032079.1;Parent=FBgn0032079.1.mrna1;Target=FBgn0032079.1 1539 4 .
Chr1	stalkie_big_nohaplotig	mRNA	120335884	120349025	.	-	.	ID=FBgn0003204.1.mrna1;Name=FBgn0003204.1;Parent=FBgn0003204.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1144;mismatches=1;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	120348862	120349025	100	-	.	ID=FBgn0003204.1.mrna1.exon1;Name=FBgn0003204.1;Parent=FBgn0003204.1.mrna1;Target=FBgn0003204.1 1 164 +
Chr1	stalkie_big_nohaplotig	exon	120348641	120348791	100	-	.	ID=FBgn0003204.1.mrna1.exon2;Name=FBgn0003204.1;Parent=FBgn0003204.1.mrna1;Target=FBgn0003204.1 165 315 +
Chr1	stalkie_big_nohaplotig	exon	120347758	120348409	99	-	.	ID=FBgn0003204.1.mrna1.exon3;Name=FBgn0003204.1;Parent=FBgn0003204.1.mrna1;Target=FBgn0003204.1 316 967 +
Chr1	stalkie_big_nohaplotig	exon	120335884	120336061	99	-	.	ID=FBgn0003204.1.mrna1.exon4;Name=FBgn0003204.1;Parent=FBgn0003204.1.mrna1;Target=FBgn0003204.1 968 1146 +
Chr1	stalkie_big_nohaplotig	CDS	120348862	120349025	100	-	0	ID=FBgn0003204.1.mrna1.cds1;Name=FBgn0003204.1;Parent=FBgn0003204.1.mrna1;Target=FBgn0003204.1 1 164 +
Chr1	stalkie_big_nohaplotig	CDS	120348641	120348791	100	-	2	ID=FBgn0003204.1.mrna1.cds2;Name=FBgn0003204.1;Parent=FBgn0003204.1.mrna1;Target=FBgn0003204.1 165 315 +
Chr1	stalkie_big_nohaplotig	CDS	120347758	120348409	99	-	0	ID=FBgn0003204.1.mrna1.cds3;Name=FBgn0003204.1;Parent=FBgn0003204.1.mrna1;Target=FBgn0003204.1 316 967 +
Chr1	stalkie_big_nohaplotig	CDS	120335884	120336061	99	-	1	ID=FBgn0003204.1.mrna1.cds4;Name=FBgn0003204.1;Parent=FBgn0003204.1.mrna1;Target=FBgn0003204.1 968 1146 +
Chr2	stalkie_big_nohaplotig	mRNA	37502408	37505124	.	-	.	ID=FBgn0034971.2.mrna1;Name=FBgn0034971.2;Parent=FBgn0034971.2.path1;Dir=sensecoverage=100.0;identity=100.0;matches=810;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	37504867	37505124	100	-	.	ID=FBgn0034971.2.mrna1.exon1;Name=FBgn0034971.2;Parent=FBgn0034971.2.mrna1;Target=FBgn0034971.2 1 258 +
Chr2	stalkie_big_nohaplotig	exon	37504384	37504640	100	-	.	ID=FBgn0034971.2.mrna1.exon2;Name=FBgn0034971.2;Parent=FBgn0034971.2.mrna1;Target=FBgn0034971.2 259 515 +
Chr2	stalkie_big_nohaplotig	exon	37502408	37502702	100	-	.	ID=FBgn0034971.2.mrna1.exon3;Name=FBgn0034971.2;Parent=FBgn0034971.2.mrna1;Target=FBgn0034971.2 516 810 +
Chr2	stalkie_big_nohaplotig	CDS	37504867	37505124	100	-	0	ID=FBgn0034971.2.mrna1.cds1;Name=FBgn0034971.2;Parent=FBgn0034971.2.mrna1;Target=FBgn0034971.2 1 258 +
Chr2	stalkie_big_nohaplotig	CDS	37504384	37504640	100	-	0	ID=FBgn0034971.2.mrna1.cds2;Name=FBgn0034971.2;Parent=FBgn0034971.2.mrna1;Target=FBgn0034971.2 259 515 +
Chr2	stalkie_big_nohaplotig	CDS	37502408	37502702	100	-	2	ID=FBgn0034971.2.mrna1.cds3;Name=FBgn0034971.2;Parent=FBgn0034971.2.mrna1;Target=FBgn0034971.2 516 810 +
ChrX	stalkie_big_nohaplotig	mRNA	16743744	16745660	.	+	.	ID=ORF2906.mrna1;Name=ORF2906;Parent=ORF2906.path1;Dir=sensecoverage=100.0;identity=100.0;matches=789;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	16743744	16743768	100	+	.	ID=ORF2906.mrna1.exon1;Name=ORF2906;Parent=ORF2906.mrna1;Target=ORF2906 1 25 +
ChrX	stalkie_big_nohaplotig	exon	16744807	16744972	100	+	.	ID=ORF2906.mrna1.exon2;Name=ORF2906;Parent=ORF2906.mrna1;Target=ORF2906 26 191 +
ChrX	stalkie_big_nohaplotig	exon	16745063	16745660	100	+	.	ID=ORF2906.mrna1.exon3;Name=ORF2906;Parent=ORF2906.mrna1;Target=ORF2906 192 789 +
ChrX	stalkie_big_nohaplotig	CDS	16743744	16743768	100	+	0	ID=ORF2906.mrna1.cds1;Name=ORF2906;Parent=ORF2906.mrna1;Target=ORF2906 1 25 +
ChrX	stalkie_big_nohaplotig	CDS	16744807	16744972	100	+	1	ID=ORF2906.mrna1.cds2;Name=ORF2906;Parent=ORF2906.mrna1;Target=ORF2906 26 191 +
ChrX	stalkie_big_nohaplotig	CDS	16745063	16745660	100	+	2	ID=ORF2906.mrna1.cds3;Name=ORF2906;Parent=ORF2906.mrna1;Target=ORF2906 192 789 +
ChrX	stalkie_big_nohaplotig	mRNA	16815660	16817532	.	+	.	ID=FBgn0024330.1.mrna1;Name=FBgn0024330.1;Parent=FBgn0024330.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=726;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	16815660	16815868	100	+	.	ID=FBgn0024330.1.mrna1.exon1;Name=FBgn0024330.1;Parent=FBgn0024330.1.mrna1;Target=FBgn0024330.1 1 209 +
ChrX	stalkie_big_nohaplotig	exon	16815925	16816099	100	+	.	ID=FBgn0024330.1.mrna1.exon2;Name=FBgn0024330.1;Parent=FBgn0024330.1.mrna1;Target=FBgn0024330.1 210 384 +
ChrX	stalkie_big_nohaplotig	exon	16816434	16816539	100	+	.	ID=FBgn0024330.1.mrna1.exon3;Name=FBgn0024330.1;Parent=FBgn0024330.1.mrna1;Target=FBgn0024330.1 385 490 +
ChrX	stalkie_big_nohaplotig	exon	16817297	16817532	100	+	.	ID=FBgn0024330.1.mrna1.exon4;Name=FBgn0024330.1;Parent=FBgn0024330.1.mrna1;Target=FBgn0024330.1 491 726 +
ChrX	stalkie_big_nohaplotig	CDS	16815660	16815868	100	+	0	ID=FBgn0024330.1.mrna1.cds1;Name=FBgn0024330.1;Parent=FBgn0024330.1.mrna1;Target=FBgn0024330.1 1 209 +
ChrX	stalkie_big_nohaplotig	CDS	16815925	16816099	100	+	2	ID=FBgn0024330.1.mrna1.cds2;Name=FBgn0024330.1;Parent=FBgn0024330.1.mrna1;Target=FBgn0024330.1 210 384 +
ChrX	stalkie_big_nohaplotig	CDS	16816434	16816539	100	+	0	ID=FBgn0024330.1.mrna1.cds3;Name=FBgn0024330.1;Parent=FBgn0024330.1.mrna1;Target=FBgn0024330.1 385 490 +
ChrX	stalkie_big_nohaplotig	CDS	16817297	16817532	100	+	1	ID=FBgn0024330.1.mrna1.cds4;Name=FBgn0024330.1;Parent=FBgn0024330.1.mrna1;Target=FBgn0024330.1 491 726 +
Chr1	stalkie_big_nohaplotig	mRNA	71989362	71990818	.	-	.	ID=ORF749.mrna1;Name=ORF749;Parent=ORF749.path1;Dir=indeterminatecoverage=99.5;identity=99.8;matches=1454;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	71989362	71990818	99	-	.	ID=ORF749.mrna1.exon1;Name=ORF749;Parent=ORF749.mrna1;Target=ORF749 1464 8 .
Chr1	stalkie_big_nohaplotig	CDS	71989362	71990816	99	-	0	ID=ORF749.mrna1.cds1;Name=ORF749;Parent=ORF749.mrna1;Target=ORF749 1464 10 .
ChrX	stalkie_big_nohaplotig	mRNA	16961500	16962956	.	-	.	ID=ORF749.mrna2;Name=ORF749;Parent=ORF749.path2;Dir=indeterminatecoverage=99.5;identity=99.8;matches=1454;mismatches=3;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	16961500	16962956	99	-	.	ID=ORF749.mrna2.exon1;Name=ORF749;Parent=ORF749.mrna2;Target=ORF749 1464 8 .
ChrX	stalkie_big_nohaplotig	CDS	16961500	16962954	99	-	0	ID=ORF749.mrna2.cds1;Name=ORF749;Parent=ORF749.mrna2;Target=ORF749 1464 10 .
Chr2	stalkie_big_nohaplotig	mRNA	20055334	20056795	.	+	.	ID=ORF749.mrna3;Name=ORF749;Parent=ORF749.path3;Dir=indeterminatecoverage=99.8;identity=99.7;matches=1457;mismatches=4;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	20055334	20056795	99	+	.	ID=ORF749.mrna3.exon1;Name=ORF749;Parent=ORF749.mrna3;Target=ORF749 1464 4 .
Chr2	stalkie_big_nohaplotig	CDS	20055335	20055359	92	+	0	ID=ORF749.mrna3.cds1;Name=ORF749;Parent=ORF749.mrna3;Target=ORF749 28 5 .
Chr2	stalkie_big_nohaplotig	mRNA	125365408	125366869	.	-	.	ID=ORF749.mrna4;Name=ORF749;Parent=ORF749.path4;Dir=indeterminatecoverage=99.8;identity=99.6;matches=1456;mismatches=5;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	125365408	125366869	99	-	.	ID=ORF749.mrna4.exon1;Name=ORF749;Parent=ORF749.mrna4;Target=ORF749 1464 4 .
Chr2	stalkie_big_nohaplotig	CDS	125366844	125366868	92	-	0	ID=ORF749.mrna4.cds1;Name=ORF749;Parent=ORF749.mrna4;Target=ORF749 28 5 .
ChrX	stalkie_big_nohaplotig	mRNA	20471568	20473027	.	+	.	ID=ORF749.mrna6;Name=ORF749;Parent=ORF749.path6;Dir=indeterminatecoverage=99.7;identity=99.5;matches=1453;mismatches=6;indels=1;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	20471568	20473027	99	+	.	ID=ORF749.mrna6.exon1;Name=ORF749;Parent=ORF749.mrna6;Target=ORF749 1462 4 .
ChrX	stalkie_big_nohaplotig	CDS	20471569	20471593	92	+	0	ID=ORF749.mrna6.cds1;Name=ORF749;Parent=ORF749.mrna6;Target=ORF749 28 5 .
ChrX	stalkie_big_nohaplotig	mRNA	30076440	30077901	.	-	.	ID=ORF749.mrna7;Name=ORF749;Parent=ORF749.path7;Dir=indeterminatecoverage=99.8;identity=99.5;matches=1454;mismatches=7;indels=1;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	30076440	30077901	99	-	.	ID=ORF749.mrna7.exon1;Name=ORF749;Parent=ORF749.mrna7;Target=ORF749 1464 4 .
ChrX	stalkie_big_nohaplotig	CDS	30077876	30077900	92	-	0	ID=ORF749.mrna7.cds1;Name=ORF749;Parent=ORF749.mrna7;Target=ORF749 28 5 .
Chr2	stalkie_big_nohaplotig	mRNA	93663484	93664945	.	+	.	ID=ORF749.mrna9;Name=ORF749;Parent=ORF749.path9;Dir=indeterminatecoverage=99.8;identity=99.5;matches=1454;mismatches=7;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	93663484	93664945	99	+	.	ID=ORF749.mrna9.exon1;Name=ORF749;Parent=ORF749.mrna9;Target=ORF749 1464 4 .
Chr2	stalkie_big_nohaplotig	CDS	93663485	93663509	92	+	0	ID=ORF749.mrna9.cds1;Name=ORF749;Parent=ORF749.mrna9;Target=ORF749 28 5 .
ChrX	stalkie_big_nohaplotig	mRNA	17086672	17087864	.	+	.	ID=ORF2049.mrna1;Name=ORF2049;Parent=ORF2049.path1;Dir=sensecoverage=100.0;identity=94.0;matches=874;mismatches=50;indels=6;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	17086672	17087005	95	+	.	ID=ORF2049.mrna1.exon1;Name=ORF2049;Parent=ORF2049.mrna1;Target=ORF2049 1 334 +
ChrX	stalkie_big_nohaplotig	exon	17087138	17087206	89	+	.	ID=ORF2049.mrna1.exon2;Name=ORF2049;Parent=ORF2049.mrna1;Target=ORF2049 335 403 +
ChrX	stalkie_big_nohaplotig	exon	17087274	17087366	91	+	.	ID=ORF2049.mrna1.exon3;Name=ORF2049;Parent=ORF2049.mrna1;Target=ORF2049 404 496 +
ChrX	stalkie_big_nohaplotig	exon	17087437	17087864	94	+	.	ID=ORF2049.mrna1.exon4;Name=ORF2049;Parent=ORF2049.mrna1;Target=ORF2049 497 930 +
ChrX	stalkie_big_nohaplotig	CDS	17086672	17087005	95	+	0	ID=ORF2049.mrna1.cds1;Name=ORF2049;Parent=ORF2049.mrna1;Target=ORF2049 1 334 +
ChrX	stalkie_big_nohaplotig	CDS	17087138	17087206	89	+	1	ID=ORF2049.mrna1.cds2;Name=ORF2049;Parent=ORF2049.mrna1;Target=ORF2049 335 403 +
ChrX	stalkie_big_nohaplotig	CDS	17087274	17087366	91	+	1	ID=ORF2049.mrna1.cds3;Name=ORF2049;Parent=ORF2049.mrna1;Target=ORF2049 404 496 +
ChrX	stalkie_big_nohaplotig	CDS	17087437	17087864	94	+	1	ID=ORF2049.mrna1.cds4;Name=ORF2049;Parent=ORF2049.mrna1;Target=ORF2049 497 930 +
ChrX	stalkie_big_nohaplotig	mRNA	17055453	17064762	.	-	.	ID=FBgn0031307.1.mrna1;Name=FBgn0031307.1;Parent=FBgn0031307.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1196;mismatches=0;indels=1;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	17064708	17064762	100	-	.	ID=FBgn0031307.1.mrna1.exon1;Name=FBgn0031307.1;Parent=FBgn0031307.1.mrna1;Target=FBgn0031307.1 1 55 +
ChrX	stalkie_big_nohaplotig	exon	17057546	17057796	100	-	.	ID=FBgn0031307.1.mrna1.exon2;Name=FBgn0031307.1;Parent=FBgn0031307.1.mrna1;Target=FBgn0031307.1 56 306 +
ChrX	stalkie_big_nohaplotig	exon	17055611	17056406	100	-	.	ID=FBgn0031307.1.mrna1.exon3;Name=FBgn0031307.1;Parent=FBgn0031307.1.mrna1;Target=FBgn0031307.1 307 1102 +
ChrX	stalkie_big_nohaplotig	exon	17055453	17055546	98	-	.	ID=FBgn0031307.1.mrna1.exon4;Name=FBgn0031307.1;Parent=FBgn0031307.1.mrna1;Target=FBgn0031307.1 1103 1197 +
ChrX	stalkie_big_nohaplotig	CDS	17064708	17064762	100	-	0	ID=FBgn0031307.1.mrna1.cds1;Name=FBgn0031307.1;Parent=FBgn0031307.1.mrna1;Target=FBgn0031307.1 1 55 +
ChrX	stalkie_big_nohaplotig	CDS	17057546	17057796	100	-	1	ID=FBgn0031307.1.mrna1.cds2;Name=FBgn0031307.1;Parent=FBgn0031307.1.mrna1;Target=FBgn0031307.1 56 306 +
ChrX	stalkie_big_nohaplotig	CDS	17055611	17056406	100	-	0	ID=FBgn0031307.1.mrna1.cds3;Name=FBgn0031307.1;Parent=FBgn0031307.1.mrna1;Target=FBgn0031307.1 307 1102 +
ChrX	stalkie_big_nohaplotig	CDS	17055453	17055546	98	-	1	ID=FBgn0031307.1.mrna1.cds4;Name=FBgn0031307.1;Parent=FBgn0031307.1.mrna1;Target=FBgn0031307.1 1103 1197 +
ChrX	stalkie_big_nohaplotig	mRNA	16999367	17001962	.	-	.	ID=FBgn0032925.1.mrna1;Name=FBgn0032925.1;Parent=FBgn0032925.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2540;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	17000673	17001962	99	-	.	ID=FBgn0032925.1.mrna1.exon1;Name=FBgn0032925.1;Parent=FBgn0032925.1.mrna1;Target=FBgn0032925.1 1 1290 +
ChrX	stalkie_big_nohaplotig	exon	16999367	17000617	100	-	.	ID=FBgn0032925.1.mrna1.exon2;Name=FBgn0032925.1;Parent=FBgn0032925.1.mrna1;Target=FBgn0032925.1 1291 2541 +
ChrX	stalkie_big_nohaplotig	CDS	17000673	17001962	99	-	0	ID=FBgn0032925.1.mrna1.cds1;Name=FBgn0032925.1;Parent=FBgn0032925.1.mrna1;Target=FBgn0032925.1 1 1290 +
ChrX	stalkie_big_nohaplotig	CDS	16999367	17000617	100	-	0	ID=FBgn0032925.1.mrna1.cds2;Name=FBgn0032925.1;Parent=FBgn0032925.1.mrna1;Target=FBgn0032925.1 1291 2541 +
ChrX	stalkie_big_nohaplotig	mRNA	16994020	16998248	.	-	.	ID=FBgn0261983.1.mrna1;Name=FBgn0261983.1;Parent=FBgn0261983.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2484;mismatches=6;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	16998159	16998248	100	-	.	ID=FBgn0261983.1.mrna1.exon1;Name=FBgn0261983.1;Parent=FBgn0261983.1.mrna1;Target=FBgn0261983.1 1 90 +
ChrX	stalkie_big_nohaplotig	exon	16996451	16998058	99	-	.	ID=FBgn0261983.1.mrna1.exon2;Name=FBgn0261983.1;Parent=FBgn0261983.1.mrna1;Target=FBgn0261983.1 91 1698 +
ChrX	stalkie_big_nohaplotig	exon	16996240	16996391	99	-	.	ID=FBgn0261983.1.mrna1.exon3;Name=FBgn0261983.1;Parent=FBgn0261983.1.mrna1;Target=FBgn0261983.1 1699 1850 +
ChrX	stalkie_big_nohaplotig	exon	16995895	16996174	100	-	.	ID=FBgn0261983.1.mrna1.exon4;Name=FBgn0261983.1;Parent=FBgn0261983.1.mrna1;Target=FBgn0261983.1 1851 2130 +
ChrX	stalkie_big_nohaplotig	exon	16995680	16995831	100	-	.	ID=FBgn0261983.1.mrna1.exon5;Name=FBgn0261983.1;Parent=FBgn0261983.1.mrna1;Target=FBgn0261983.1 2131 2282 +
ChrX	stalkie_big_nohaplotig	exon	16994211	16994301	100	-	.	ID=FBgn0261983.1.mrna1.exon6;Name=FBgn0261983.1;Parent=FBgn0261983.1.mrna1;Target=FBgn0261983.1 2283 2373 +
ChrX	stalkie_big_nohaplotig	exon	16994020	16994136	99	-	.	ID=FBgn0261983.1.mrna1.exon7;Name=FBgn0261983.1;Parent=FBgn0261983.1.mrna1;Target=FBgn0261983.1 2374 2490 +
ChrX	stalkie_big_nohaplotig	CDS	16998159	16998248	100	-	0	ID=FBgn0261983.1.mrna1.cds1;Name=FBgn0261983.1;Parent=FBgn0261983.1.mrna1;Target=FBgn0261983.1 1 90 +
ChrX	stalkie_big_nohaplotig	CDS	16996451	16998058	99	-	0	ID=FBgn0261983.1.mrna1.cds2;Name=FBgn0261983.1;Parent=FBgn0261983.1.mrna1;Target=FBgn0261983.1 91 1698 +
ChrX	stalkie_big_nohaplotig	CDS	16996240	16996391	99	-	0	ID=FBgn0261983.1.mrna1.cds3;Name=FBgn0261983.1;Parent=FBgn0261983.1.mrna1;Target=FBgn0261983.1 1699 1850 +
ChrX	stalkie_big_nohaplotig	CDS	16995895	16996174	100	-	2	ID=FBgn0261983.1.mrna1.cds4;Name=FBgn0261983.1;Parent=FBgn0261983.1.mrna1;Target=FBgn0261983.1 1851 2130 +
ChrX	stalkie_big_nohaplotig	CDS	16995680	16995831	100	-	0	ID=FBgn0261983.1.mrna1.cds5;Name=FBgn0261983.1;Parent=FBgn0261983.1.mrna1;Target=FBgn0261983.1 2131 2282 +
ChrX	stalkie_big_nohaplotig	CDS	16994211	16994301	100	-	2	ID=FBgn0261983.1.mrna1.cds6;Name=FBgn0261983.1;Parent=FBgn0261983.1.mrna1;Target=FBgn0261983.1 2283 2373 +
ChrX	stalkie_big_nohaplotig	CDS	16994020	16994136	99	-	0	ID=FBgn0261983.1.mrna1.cds7;Name=FBgn0261983.1;Parent=FBgn0261983.1.mrna1;Target=FBgn0261983.1 2374 2490 +
ChrX	stalkie_big_nohaplotig	mRNA	16998627	16999106	.	+	.	ID=FBgn0263051.1.mrna1;Name=FBgn0263051.1;Parent=FBgn0263051.1.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=480;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	16998627	16999106	100	+	.	ID=FBgn0263051.1.mrna1.exon1;Name=FBgn0263051.1;Parent=FBgn0263051.1.mrna1;Target=FBgn0263051.1 480 1 .
ChrX	stalkie_big_nohaplotig	CDS	16998627	16999106	100	+	0	ID=FBgn0263051.1.mrna1.cds1;Name=FBgn0263051.1;Parent=FBgn0263051.1.mrna1;Target=FBgn0263051.1 480 1 .
Chr2	stalkie_big_nohaplotig	mRNA	69830364	69842426	.	-	.	ID=FBgn0011747.1.mrna1;Name=FBgn0011747.1;Parent=FBgn0011747.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=5070;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	69842271	69842426	100	-	.	ID=FBgn0011747.1.mrna1.exon1;Name=FBgn0011747.1;Parent=FBgn0011747.1.mrna1;Target=FBgn0011747.1 1 156 +
Chr2	stalkie_big_nohaplotig	exon	69840509	69840616	100	-	.	ID=FBgn0011747.1.mrna1.exon2;Name=FBgn0011747.1;Parent=FBgn0011747.1.mrna1;Target=FBgn0011747.1 157 264 +
Chr2	stalkie_big_nohaplotig	exon	69840151	69840447	100	-	.	ID=FBgn0011747.1.mrna1.exon3;Name=FBgn0011747.1;Parent=FBgn0011747.1.mrna1;Target=FBgn0011747.1 265 561 +
Chr2	stalkie_big_nohaplotig	exon	69836015	69837883	100	-	.	ID=FBgn0011747.1.mrna1.exon4;Name=FBgn0011747.1;Parent=FBgn0011747.1.mrna1;Target=FBgn0011747.1 562 2430 +
Chr2	stalkie_big_nohaplotig	exon	69834931	69835258	100	-	.	ID=FBgn0011747.1.mrna1.exon5;Name=FBgn0011747.1;Parent=FBgn0011747.1.mrna1;Target=FBgn0011747.1 2431 2758 +
Chr2	stalkie_big_nohaplotig	exon	69834638	69834725	100	-	.	ID=FBgn0011747.1.mrna1.exon6;Name=FBgn0011747.1;Parent=FBgn0011747.1.mrna1;Target=FBgn0011747.1 2759 2846 +
Chr2	stalkie_big_nohaplotig	exon	69834387	69834502	100	-	.	ID=FBgn0011747.1.mrna1.exon7;Name=FBgn0011747.1;Parent=FBgn0011747.1.mrna1;Target=FBgn0011747.1 2847 2962 +
Chr2	stalkie_big_nohaplotig	exon	69834188	69834305	100	-	.	ID=FBgn0011747.1.mrna1.exon8;Name=FBgn0011747.1;Parent=FBgn0011747.1.mrna1;Target=FBgn0011747.1 2963 3080 +
Chr2	stalkie_big_nohaplotig	exon	69832286	69834126	100	-	.	ID=FBgn0011747.1.mrna1.exon9;Name=FBgn0011747.1;Parent=FBgn0011747.1.mrna1;Target=FBgn0011747.1 3081 4921 +
Chr2	stalkie_big_nohaplotig	exon	69830364	69830512	100	-	.	ID=FBgn0011747.1.mrna1.exon10;Name=FBgn0011747.1;Parent=FBgn0011747.1.mrna1;Target=FBgn0011747.1 4922 5070 +
Chr2	stalkie_big_nohaplotig	CDS	69842271	69842426	100	-	0	ID=FBgn0011747.1.mrna1.cds1;Name=FBgn0011747.1;Parent=FBgn0011747.1.mrna1;Target=FBgn0011747.1 1 156 +
Chr2	stalkie_big_nohaplotig	CDS	69840509	69840616	100	-	0	ID=FBgn0011747.1.mrna1.cds2;Name=FBgn0011747.1;Parent=FBgn0011747.1.mrna1;Target=FBgn0011747.1 157 264 +
Chr2	stalkie_big_nohaplotig	CDS	69840151	69840447	100	-	0	ID=FBgn0011747.1.mrna1.cds3;Name=FBgn0011747.1;Parent=FBgn0011747.1.mrna1;Target=FBgn0011747.1 265 561 +
Chr2	stalkie_big_nohaplotig	CDS	69836015	69837883	100	-	0	ID=FBgn0011747.1.mrna1.cds4;Name=FBgn0011747.1;Parent=FBgn0011747.1.mrna1;Target=FBgn0011747.1 562 2430 +
Chr2	stalkie_big_nohaplotig	CDS	69834931	69835258	100	-	0	ID=FBgn0011747.1.mrna1.cds5;Name=FBgn0011747.1;Parent=FBgn0011747.1.mrna1;Target=FBgn0011747.1 2431 2758 +
Chr2	stalkie_big_nohaplotig	CDS	69834638	69834725	100	-	1	ID=FBgn0011747.1.mrna1.cds6;Name=FBgn0011747.1;Parent=FBgn0011747.1.mrna1;Target=FBgn0011747.1 2759 2846 +
Chr2	stalkie_big_nohaplotig	CDS	69834387	69834502	100	-	2	ID=FBgn0011747.1.mrna1.cds7;Name=FBgn0011747.1;Parent=FBgn0011747.1.mrna1;Target=FBgn0011747.1 2847 2962 +
Chr2	stalkie_big_nohaplotig	CDS	69834188	69834305	100	-	1	ID=FBgn0011747.1.mrna1.cds8;Name=FBgn0011747.1;Parent=FBgn0011747.1.mrna1;Target=FBgn0011747.1 2963 3080 +
Chr2	stalkie_big_nohaplotig	CDS	69832286	69834126	100	-	2	ID=FBgn0011747.1.mrna1.cds9;Name=FBgn0011747.1;Parent=FBgn0011747.1.mrna1;Target=FBgn0011747.1 3081 4921 +
Chr2	stalkie_big_nohaplotig	CDS	69830364	69830512	100	-	1	ID=FBgn0011747.1.mrna1.cds10;Name=FBgn0011747.1;Parent=FBgn0011747.1.mrna1;Target=FBgn0011747.1 4922 5070 +
Chr2	stalkie_big_nohaplotig	mRNA	69763433	69784979	.	+	.	ID=FBgn0004607.1.mrna1;Name=FBgn0004607.1;Parent=FBgn0004607.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=6703;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	69763433	69764867	99	+	.	ID=FBgn0004607.1.mrna1.exon1;Name=FBgn0004607.1;Parent=FBgn0004607.1.mrna1;Target=FBgn0004607.1 1 1435 +
Chr2	stalkie_big_nohaplotig	exon	69776613	69778142	100	+	.	ID=FBgn0004607.1.mrna1.exon2;Name=FBgn0004607.1;Parent=FBgn0004607.1.mrna1;Target=FBgn0004607.1 1436 2965 +
Chr2	stalkie_big_nohaplotig	exon	69778289	69778971	99	+	.	ID=FBgn0004607.1.mrna1.exon3;Name=FBgn0004607.1;Parent=FBgn0004607.1.mrna1;Target=FBgn0004607.1 2966 3648 +
Chr2	stalkie_big_nohaplotig	exon	69779118	69779258	100	+	.	ID=FBgn0004607.1.mrna1.exon4;Name=FBgn0004607.1;Parent=FBgn0004607.1.mrna1;Target=FBgn0004607.1 3649 3789 +
Chr2	stalkie_big_nohaplotig	exon	69779318	69780397	99	+	.	ID=FBgn0004607.1.mrna1.exon5;Name=FBgn0004607.1;Parent=FBgn0004607.1.mrna1;Target=FBgn0004607.1 3790 4869 +
Chr2	stalkie_big_nohaplotig	exon	69783141	69784979	99	+	.	ID=FBgn0004607.1.mrna1.exon6;Name=FBgn0004607.1;Parent=FBgn0004607.1.mrna1;Target=FBgn0004607.1 4870 6708 +
Chr2	stalkie_big_nohaplotig	CDS	69763433	69764867	99	+	0	ID=FBgn0004607.1.mrna1.cds1;Name=FBgn0004607.1;Parent=FBgn0004607.1.mrna1;Target=FBgn0004607.1 1 1435 +
Chr2	stalkie_big_nohaplotig	CDS	69776613	69778142	100	+	1	ID=FBgn0004607.1.mrna1.cds2;Name=FBgn0004607.1;Parent=FBgn0004607.1.mrna1;Target=FBgn0004607.1 1436 2965 +
Chr2	stalkie_big_nohaplotig	CDS	69778289	69778971	99	+	1	ID=FBgn0004607.1.mrna1.cds3;Name=FBgn0004607.1;Parent=FBgn0004607.1.mrna1;Target=FBgn0004607.1 2966 3648 +
Chr2	stalkie_big_nohaplotig	CDS	69779118	69779258	100	+	0	ID=FBgn0004607.1.mrna1.cds4;Name=FBgn0004607.1;Parent=FBgn0004607.1.mrna1;Target=FBgn0004607.1 3649 3789 +
Chr2	stalkie_big_nohaplotig	CDS	69779318	69780397	99	+	0	ID=FBgn0004607.1.mrna1.cds5;Name=FBgn0004607.1;Parent=FBgn0004607.1.mrna1;Target=FBgn0004607.1 3790 4869 +
Chr2	stalkie_big_nohaplotig	CDS	69783141	69784979	99	+	0	ID=FBgn0004607.1.mrna1.cds6;Name=FBgn0004607.1;Parent=FBgn0004607.1.mrna1;Target=FBgn0004607.1 4870 6708 +
Chr1	stalkie_big_nohaplotig	mRNA	124887086	124892101	.	-	.	ID=FBgn0031090.1.mrna1;Name=FBgn0031090.1;Parent=FBgn0031090.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=628;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	124892020	124892101	100	-	.	ID=FBgn0031090.1.mrna1.exon1;Name=FBgn0031090.1;Parent=FBgn0031090.1.mrna1;Target=FBgn0031090.1 1 82 +
Chr1	stalkie_big_nohaplotig	exon	124888901	124889200	100	-	.	ID=FBgn0031090.1.mrna1.exon2;Name=FBgn0031090.1;Parent=FBgn0031090.1.mrna1;Target=FBgn0031090.1 83 382 +
Chr1	stalkie_big_nohaplotig	exon	124887086	124887333	99	-	.	ID=FBgn0031090.1.mrna1.exon3;Name=FBgn0031090.1;Parent=FBgn0031090.1.mrna1;Target=FBgn0031090.1 383 630 +
Chr1	stalkie_big_nohaplotig	CDS	124892020	124892101	100	-	0	ID=FBgn0031090.1.mrna1.cds1;Name=FBgn0031090.1;Parent=FBgn0031090.1.mrna1;Target=FBgn0031090.1 1 82 +
Chr1	stalkie_big_nohaplotig	CDS	124888901	124889200	100	-	1	ID=FBgn0031090.1.mrna1.cds2;Name=FBgn0031090.1;Parent=FBgn0031090.1.mrna1;Target=FBgn0031090.1 83 382 +
Chr1	stalkie_big_nohaplotig	CDS	124887086	124887333	99	-	1	ID=FBgn0031090.1.mrna1.cds3;Name=FBgn0031090.1;Parent=FBgn0031090.1.mrna1;Target=FBgn0031090.1 383 630 +
Chr1	stalkie_big_nohaplotig	mRNA	125262792	125266010	.	+	.	ID=FBgn0029922.1.mrna1;Name=FBgn0029922.1;Parent=FBgn0029922.1.path1;Dir=sensecoverage=100.0;identity=99.4;matches=2880;mismatches=18;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	125262792	125264766	99	+	.	ID=FBgn0029922.1.mrna1.exon1;Name=FBgn0029922.1;Parent=FBgn0029922.1.mrna1;Target=FBgn0029922.1 1 1975 +
Chr1	stalkie_big_nohaplotig	exon	125265088	125266010	99	+	.	ID=FBgn0029922.1.mrna1.exon2;Name=FBgn0029922.1;Parent=FBgn0029922.1.mrna1;Target=FBgn0029922.1 1976 2898 +
Chr1	stalkie_big_nohaplotig	CDS	125262792	125264766	99	+	0	ID=FBgn0029922.1.mrna1.cds1;Name=FBgn0029922.1;Parent=FBgn0029922.1.mrna1;Target=FBgn0029922.1 1 1975 +
Chr1	stalkie_big_nohaplotig	CDS	125265088	125266010	99	+	1	ID=FBgn0029922.1.mrna1.cds2;Name=FBgn0029922.1;Parent=FBgn0029922.1.mrna1;Target=FBgn0029922.1 1976 2898 +
Chr1	stalkie_big_nohaplotig	mRNA	130454990	130456358	.	+	.	ID=ORF877.mrna1;Name=ORF877;Parent=ORF877.path1;Dir=indeterminatecoverage=99.9;identity=98.8;matches=1353;mismatches=16;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	130454990	130456358	98	+	.	ID=ORF877.mrna1.exon1;Name=ORF877;Parent=ORF877.mrna1;Target=ORF877 1371 3 .
Chr1	stalkie_big_nohaplotig	CDS	130454991	130456358	98	+	0	ID=ORF877.mrna1.cds1;Name=ORF877;Parent=ORF877.mrna1;Target=ORF877 1371 4 .
ChrX	stalkie_big_nohaplotig	mRNA	96035063	96036431	.	-	.	ID=ORF877.mrna2;Name=ORF877;Parent=ORF877.path2;Dir=indeterminatecoverage=99.9;identity=98.8;matches=1353;mismatches=16;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	96035063	96036431	98	-	.	ID=ORF877.mrna2.exon1;Name=ORF877;Parent=ORF877.mrna2;Target=ORF877 1371 3 .
ChrX	stalkie_big_nohaplotig	CDS	96035063	96036430	98	-	0	ID=ORF877.mrna2.cds1;Name=ORF877;Parent=ORF877.mrna2;Target=ORF877 1371 4 .
Chr1	stalkie_big_nohaplotig	mRNA	130789156	130789914	.	+	.	ID=ORF3181.mrna1;Name=ORF3181;Parent=ORF3181.path1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=757;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	130789156	130789914	99	+	.	ID=ORF3181.mrna1.exon1;Name=ORF3181;Parent=ORF3181.mrna1;Target=ORF3181 759 1 .
Chr1	stalkie_big_nohaplotig	CDS	130789156	130789914	99	+	0	ID=ORF3181.mrna1.cds1;Name=ORF3181;Parent=ORF3181.mrna1;Target=ORF3181 759 1 .
Chr1	stalkie_big_nohaplotig	mRNA	130716938	130728583	.	+	.	ID=FBgn0030336.1.mrna1;Name=FBgn0030336.1;Parent=FBgn0030336.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2671;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	130716938	130717109	100	+	.	ID=FBgn0030336.1.mrna1.exon1;Name=FBgn0030336.1;Parent=FBgn0030336.1.mrna1;Target=FBgn0030336.1 1 172 +
Chr1	stalkie_big_nohaplotig	exon	130717557	130717741	99	+	.	ID=FBgn0030336.1.mrna1.exon2;Name=FBgn0030336.1;Parent=FBgn0030336.1.mrna1;Target=FBgn0030336.1 173 357 +
Chr1	stalkie_big_nohaplotig	exon	130725306	130725485	99	+	.	ID=FBgn0030336.1.mrna1.exon3;Name=FBgn0030336.1;Parent=FBgn0030336.1.mrna1;Target=FBgn0030336.1 358 537 +
Chr1	stalkie_big_nohaplotig	exon	130725567	130725736	100	+	.	ID=FBgn0030336.1.mrna1.exon4;Name=FBgn0030336.1;Parent=FBgn0030336.1.mrna1;Target=FBgn0030336.1 538 707 +
Chr1	stalkie_big_nohaplotig	exon	130725802	130726421	99	+	.	ID=FBgn0030336.1.mrna1.exon5;Name=FBgn0030336.1;Parent=FBgn0030336.1.mrna1;Target=FBgn0030336.1 708 1327 +
Chr1	stalkie_big_nohaplotig	exon	130726977	130727273	99	+	.	ID=FBgn0030336.1.mrna1.exon6;Name=FBgn0030336.1;Parent=FBgn0030336.1.mrna1;Target=FBgn0030336.1 1328 1624 +
Chr1	stalkie_big_nohaplotig	exon	130727340	130727473	100	+	.	ID=FBgn0030336.1.mrna1.exon7;Name=FBgn0030336.1;Parent=FBgn0030336.1.mrna1;Target=FBgn0030336.1 1625 1758 +
Chr1	stalkie_big_nohaplotig	exon	130727530	130727857	100	+	.	ID=FBgn0030336.1.mrna1.exon8;Name=FBgn0030336.1;Parent=FBgn0030336.1.mrna1;Target=FBgn0030336.1 1759 2086 +
Chr1	stalkie_big_nohaplotig	exon	130727933	130728034	100	+	.	ID=FBgn0030336.1.mrna1.exon9;Name=FBgn0030336.1;Parent=FBgn0030336.1.mrna1;Target=FBgn0030336.1 2087 2188 +
Chr1	stalkie_big_nohaplotig	exon	130728096	130728583	100	+	.	ID=FBgn0030336.1.mrna1.exon10;Name=FBgn0030336.1;Parent=FBgn0030336.1.mrna1;Target=FBgn0030336.1 2189 2676 +
Chr1	stalkie_big_nohaplotig	CDS	130716938	130717109	100	+	0	ID=FBgn0030336.1.mrna1.cds1;Name=FBgn0030336.1;Parent=FBgn0030336.1.mrna1;Target=FBgn0030336.1 1 172 +
Chr1	stalkie_big_nohaplotig	CDS	130717557	130717741	99	+	1	ID=FBgn0030336.1.mrna1.cds2;Name=FBgn0030336.1;Parent=FBgn0030336.1.mrna1;Target=FBgn0030336.1 173 357 +
Chr1	stalkie_big_nohaplotig	CDS	130725306	130725485	99	+	0	ID=FBgn0030336.1.mrna1.cds3;Name=FBgn0030336.1;Parent=FBgn0030336.1.mrna1;Target=FBgn0030336.1 358 537 +
Chr1	stalkie_big_nohaplotig	CDS	130725567	130725736	100	+	0	ID=FBgn0030336.1.mrna1.cds4;Name=FBgn0030336.1;Parent=FBgn0030336.1.mrna1;Target=FBgn0030336.1 538 707 +
Chr1	stalkie_big_nohaplotig	CDS	130725802	130726421	99	+	2	ID=FBgn0030336.1.mrna1.cds5;Name=FBgn0030336.1;Parent=FBgn0030336.1.mrna1;Target=FBgn0030336.1 708 1327 +
Chr1	stalkie_big_nohaplotig	CDS	130726977	130727273	99	+	1	ID=FBgn0030336.1.mrna1.cds6;Name=FBgn0030336.1;Parent=FBgn0030336.1.mrna1;Target=FBgn0030336.1 1328 1624 +
Chr1	stalkie_big_nohaplotig	CDS	130727340	130727473	100	+	1	ID=FBgn0030336.1.mrna1.cds7;Name=FBgn0030336.1;Parent=FBgn0030336.1.mrna1;Target=FBgn0030336.1 1625 1758 +
Chr1	stalkie_big_nohaplotig	CDS	130727530	130727857	100	+	0	ID=FBgn0030336.1.mrna1.cds8;Name=FBgn0030336.1;Parent=FBgn0030336.1.mrna1;Target=FBgn0030336.1 1759 2086 +
Chr1	stalkie_big_nohaplotig	CDS	130727933	130728034	100	+	1	ID=FBgn0030336.1.mrna1.cds9;Name=FBgn0030336.1;Parent=FBgn0030336.1.mrna1;Target=FBgn0030336.1 2087 2188 +
Chr1	stalkie_big_nohaplotig	CDS	130728096	130728583	100	+	1	ID=FBgn0030336.1.mrna1.cds10;Name=FBgn0030336.1;Parent=FBgn0030336.1.mrna1;Target=FBgn0030336.1 2189 2676 +
Chr2	stalkie_big_nohaplotig	mRNA	145932375	145942293	.	-	.	ID=FBgn0000247.1.mrna1;Name=FBgn0000247.1;Parent=FBgn0000247.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=6445;mismatches=44;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	145942023	145942293	100	-	.	ID=FBgn0000247.1.mrna1.exon1;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 1 271 +
Chr2	stalkie_big_nohaplotig	exon	145939395	145940113	98	-	.	ID=FBgn0000247.1.mrna1.exon2;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 272 990 +
Chr2	stalkie_big_nohaplotig	exon	145938715	145939330	99	-	.	ID=FBgn0000247.1.mrna1.exon3;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 991 1606 +
Chr2	stalkie_big_nohaplotig	exon	145937676	145938235	99	-	.	ID=FBgn0000247.1.mrna1.exon4;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 1607 2166 +
Chr2	stalkie_big_nohaplotig	exon	145937268	145937575	100	-	.	ID=FBgn0000247.1.mrna1.exon5;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 2167 2474 +
Chr2	stalkie_big_nohaplotig	exon	145936632	145937189	99	-	.	ID=FBgn0000247.1.mrna1.exon6;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 2475 3032 +
Chr2	stalkie_big_nohaplotig	exon	145936402	145936559	100	-	.	ID=FBgn0000247.1.mrna1.exon7;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 3033 3190 +
Chr2	stalkie_big_nohaplotig	exon	145936201	145936346	98	-	.	ID=FBgn0000247.1.mrna1.exon8;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 3191 3336 +
Chr2	stalkie_big_nohaplotig	exon	145935887	145936120	99	-	.	ID=FBgn0000247.1.mrna1.exon9;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 3337 3570 +
Chr2	stalkie_big_nohaplotig	exon	145935694	145935826	98	-	.	ID=FBgn0000247.1.mrna1.exon10;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 3571 3703 +
Chr2	stalkie_big_nohaplotig	exon	145935507	145935622	99	-	.	ID=FBgn0000247.1.mrna1.exon11;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 3704 3819 +
Chr2	stalkie_big_nohaplotig	exon	145935282	145935451	98	-	.	ID=FBgn0000247.1.mrna1.exon12;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 3820 3989 +
Chr2	stalkie_big_nohaplotig	exon	145935065	145935146	97	-	.	ID=FBgn0000247.1.mrna1.exon13;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 3990 4071 +
Chr2	stalkie_big_nohaplotig	exon	145934718	145934987	100	-	.	ID=FBgn0000247.1.mrna1.exon14;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 4072 4341 +
Chr2	stalkie_big_nohaplotig	exon	145933918	145934643	98	-	.	ID=FBgn0000247.1.mrna1.exon15;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 4342 5067 +
Chr2	stalkie_big_nohaplotig	exon	145933620	145933856	98	-	.	ID=FBgn0000247.1.mrna1.exon16;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 5068 5304 +
Chr2	stalkie_big_nohaplotig	exon	145932375	145933559	99	-	.	ID=FBgn0000247.1.mrna1.exon17;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 5305 6489 +
Chr2	stalkie_big_nohaplotig	CDS	145942023	145942293	100	-	0	ID=FBgn0000247.1.mrna1.cds1;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 1 271 +
Chr2	stalkie_big_nohaplotig	CDS	145939395	145940113	98	-	1	ID=FBgn0000247.1.mrna1.cds2;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 272 990 +
Chr2	stalkie_big_nohaplotig	CDS	145938715	145939330	99	-	0	ID=FBgn0000247.1.mrna1.cds3;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 991 1606 +
Chr2	stalkie_big_nohaplotig	CDS	145937676	145938235	99	-	1	ID=FBgn0000247.1.mrna1.cds4;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 1607 2166 +
Chr2	stalkie_big_nohaplotig	CDS	145937268	145937575	100	-	0	ID=FBgn0000247.1.mrna1.cds5;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 2167 2474 +
Chr2	stalkie_big_nohaplotig	CDS	145936632	145937189	99	-	2	ID=FBgn0000247.1.mrna1.cds6;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 2475 3032 +
Chr2	stalkie_big_nohaplotig	CDS	145936402	145936559	100	-	2	ID=FBgn0000247.1.mrna1.cds7;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 3033 3190 +
Chr2	stalkie_big_nohaplotig	CDS	145936201	145936346	98	-	1	ID=FBgn0000247.1.mrna1.cds8;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 3191 3336 +
Chr2	stalkie_big_nohaplotig	CDS	145935887	145936120	99	-	0	ID=FBgn0000247.1.mrna1.cds9;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 3337 3570 +
Chr2	stalkie_big_nohaplotig	CDS	145935694	145935826	98	-	0	ID=FBgn0000247.1.mrna1.cds10;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 3571 3703 +
Chr2	stalkie_big_nohaplotig	CDS	145935507	145935622	99	-	1	ID=FBgn0000247.1.mrna1.cds11;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 3704 3819 +
Chr2	stalkie_big_nohaplotig	CDS	145935282	145935451	98	-	0	ID=FBgn0000247.1.mrna1.cds12;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 3820 3989 +
Chr2	stalkie_big_nohaplotig	CDS	145935065	145935146	97	-	2	ID=FBgn0000247.1.mrna1.cds13;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 3990 4071 +
Chr2	stalkie_big_nohaplotig	CDS	145934718	145934987	100	-	0	ID=FBgn0000247.1.mrna1.cds14;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 4072 4341 +
Chr2	stalkie_big_nohaplotig	CDS	145933918	145934643	98	-	0	ID=FBgn0000247.1.mrna1.cds15;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 4342 5067 +
Chr2	stalkie_big_nohaplotig	CDS	145933620	145933856	98	-	0	ID=FBgn0000247.1.mrna1.cds16;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 5068 5304 +
Chr2	stalkie_big_nohaplotig	CDS	145932375	145933559	99	-	0	ID=FBgn0000247.1.mrna1.cds17;Name=FBgn0000247.1;Parent=FBgn0000247.1.mrna1;Target=FBgn0000247.1 5305 6489 +
Chr2	stalkie_big_nohaplotig	mRNA	21230770	21232977	.	-	.	ID=FBgn0033653.1.mrna1;Name=FBgn0033653.1;Parent=FBgn0033653.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=981;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	21232828	21232977	100	-	.	ID=FBgn0033653.1.mrna1.exon1;Name=FBgn0033653.1;Parent=FBgn0033653.1.mrna1;Target=FBgn0033653.1 1 150 +
Chr2	stalkie_big_nohaplotig	exon	21232228	21232741	100	-	.	ID=FBgn0033653.1.mrna1.exon2;Name=FBgn0033653.1;Parent=FBgn0033653.1.mrna1;Target=FBgn0033653.1 151 664 +
Chr2	stalkie_big_nohaplotig	exon	21230770	21231086	100	-	.	ID=FBgn0033653.1.mrna1.exon3;Name=FBgn0033653.1;Parent=FBgn0033653.1.mrna1;Target=FBgn0033653.1 665 981 +
Chr2	stalkie_big_nohaplotig	CDS	21232828	21232977	100	-	0	ID=FBgn0033653.1.mrna1.cds1;Name=FBgn0033653.1;Parent=FBgn0033653.1.mrna1;Target=FBgn0033653.1 1 150 +
Chr2	stalkie_big_nohaplotig	CDS	21232228	21232741	100	-	0	ID=FBgn0033653.1.mrna1.cds2;Name=FBgn0033653.1;Parent=FBgn0033653.1.mrna1;Target=FBgn0033653.1 151 664 +
Chr2	stalkie_big_nohaplotig	CDS	21230770	21231086	100	-	1	ID=FBgn0033653.1.mrna1.cds3;Name=FBgn0033653.1;Parent=FBgn0033653.1.mrna1;Target=FBgn0033653.1 665 981 +
ChrX	stalkie_big_nohaplotig	mRNA	59602989	59608577	.	-	.	ID=FBgn0001084.1.mrna1;Name=FBgn0001084.1;Parent=FBgn0001084.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1215;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	59608470	59608577	100	-	.	ID=FBgn0001084.1.mrna1.exon1;Name=FBgn0001084.1;Parent=FBgn0001084.1.mrna1;Target=FBgn0001084.1 1 108 +
ChrX	stalkie_big_nohaplotig	exon	59607837	59608400	100	-	.	ID=FBgn0001084.1.mrna1.exon2;Name=FBgn0001084.1;Parent=FBgn0001084.1.mrna1;Target=FBgn0001084.1 109 672 +
ChrX	stalkie_big_nohaplotig	exon	59607287	59607774	100	-	.	ID=FBgn0001084.1.mrna1.exon3;Name=FBgn0001084.1;Parent=FBgn0001084.1.mrna1;Target=FBgn0001084.1 673 1160 +
ChrX	stalkie_big_nohaplotig	exon	59602989	59603043	100	-	.	ID=FBgn0001084.1.mrna1.exon4;Name=FBgn0001084.1;Parent=FBgn0001084.1.mrna1;Target=FBgn0001084.1 1161 1215 +
ChrX	stalkie_big_nohaplotig	CDS	59608470	59608577	100	-	0	ID=FBgn0001084.1.mrna1.cds1;Name=FBgn0001084.1;Parent=FBgn0001084.1.mrna1;Target=FBgn0001084.1 1 108 +
ChrX	stalkie_big_nohaplotig	CDS	59607837	59608400	100	-	0	ID=FBgn0001084.1.mrna1.cds2;Name=FBgn0001084.1;Parent=FBgn0001084.1.mrna1;Target=FBgn0001084.1 109 672 +
ChrX	stalkie_big_nohaplotig	CDS	59607287	59607774	100	-	0	ID=FBgn0001084.1.mrna1.cds3;Name=FBgn0001084.1;Parent=FBgn0001084.1.mrna1;Target=FBgn0001084.1 673 1160 +
ChrX	stalkie_big_nohaplotig	CDS	59602989	59603043	100	-	2	ID=FBgn0001084.1.mrna1.cds4;Name=FBgn0001084.1;Parent=FBgn0001084.1.mrna1;Target=FBgn0001084.1 1161 1215 +
ChrX	stalkie_big_nohaplotig	mRNA	59320123	59321545	.	+	.	ID=FBgn0002022.1.mrna1;Name=FBgn0002022.1;Parent=FBgn0002022.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1362;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	59320123	59320510	100	+	.	ID=FBgn0002022.1.mrna1.exon1;Name=FBgn0002022.1;Parent=FBgn0002022.1.mrna1;Target=FBgn0002022.1 1 388 +
ChrX	stalkie_big_nohaplotig	exon	59320572	59321545	100	+	.	ID=FBgn0002022.1.mrna1.exon2;Name=FBgn0002022.1;Parent=FBgn0002022.1.mrna1;Target=FBgn0002022.1 389 1362 +
ChrX	stalkie_big_nohaplotig	CDS	59320123	59320510	100	+	0	ID=FBgn0002022.1.mrna1.cds1;Name=FBgn0002022.1;Parent=FBgn0002022.1.mrna1;Target=FBgn0002022.1 1 388 +
ChrX	stalkie_big_nohaplotig	CDS	59320572	59321545	100	+	1	ID=FBgn0002022.1.mrna1.cds2;Name=FBgn0002022.1;Parent=FBgn0002022.1.mrna1;Target=FBgn0002022.1 389 1362 +
ChrX	stalkie_big_nohaplotig	mRNA	59522202	59526947	.	+	.	ID=FBgn0032741.1.mrna1;Name=FBgn0032741.1;Parent=FBgn0032741.1.path1;Dir=sensecoverage=87.2;identity=100.0;matches=1473;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	59522202	59522517	100	+	.	ID=FBgn0032741.1.mrna1.exon1;Name=FBgn0032741.1;Parent=FBgn0032741.1.mrna1;Target=FBgn0032741.1 58 373 +
ChrX	stalkie_big_nohaplotig	exon	59522625	59522874	100	+	.	ID=FBgn0032741.1.mrna1.exon2;Name=FBgn0032741.1;Parent=FBgn0032741.1.mrna1;Target=FBgn0032741.1 374 623 +
ChrX	stalkie_big_nohaplotig	exon	59525921	59526089	100	+	.	ID=FBgn0032741.1.mrna1.exon3;Name=FBgn0032741.1;Parent=FBgn0032741.1.mrna1;Target=FBgn0032741.1 624 792 +
ChrX	stalkie_big_nohaplotig	exon	59526151	59526291	100	+	.	ID=FBgn0032741.1.mrna1.exon4;Name=FBgn0032741.1;Parent=FBgn0032741.1.mrna1;Target=FBgn0032741.1 793 933 +
ChrX	stalkie_big_nohaplotig	exon	59526351	59526947	100	+	.	ID=FBgn0032741.1.mrna1.exon5;Name=FBgn0032741.1;Parent=FBgn0032741.1.mrna1;Target=FBgn0032741.1 934 1530 +
ChrX	stalkie_big_nohaplotig	CDS	59522202	59522517	100	+	0	ID=FBgn0032741.1.mrna1.cds1;Name=FBgn0032741.1;Parent=FBgn0032741.1.mrna1;Target=FBgn0032741.1 58 373 +
ChrX	stalkie_big_nohaplotig	CDS	59522625	59522874	100	+	1	ID=FBgn0032741.1.mrna1.cds2;Name=FBgn0032741.1;Parent=FBgn0032741.1.mrna1;Target=FBgn0032741.1 374 623 +
ChrX	stalkie_big_nohaplotig	CDS	59525921	59526089	100	+	2	ID=FBgn0032741.1.mrna1.cds3;Name=FBgn0032741.1;Parent=FBgn0032741.1.mrna1;Target=FBgn0032741.1 624 792 +
ChrX	stalkie_big_nohaplotig	CDS	59526151	59526291	100	+	0	ID=FBgn0032741.1.mrna1.cds4;Name=FBgn0032741.1;Parent=FBgn0032741.1.mrna1;Target=FBgn0032741.1 793 933 +
ChrX	stalkie_big_nohaplotig	CDS	59526351	59526947	100	+	0	ID=FBgn0032741.1.mrna1.cds5;Name=FBgn0032741.1;Parent=FBgn0032741.1.mrna1;Target=FBgn0032741.1 934 1530 +
Chr2	stalkie_big_nohaplotig	mRNA	127270170	127270316	.	-	.	ID=FBgn0032741.1.mrna2;Name=FBgn0032741.1;Parent=FBgn0032741.1.path2;Dir=indeterminatecoverage=8.7;identity=100.0;matches=147;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	127270170	127270316	100	-	.	ID=FBgn0032741.1.mrna2.exon1;Name=FBgn0032741.1;Parent=FBgn0032741.1.mrna2;Target=FBgn0032741.1 1677 1531 .
Chr2	stalkie_big_nohaplotig	CDS	127270170	127270316	100	-	0	ID=FBgn0032741.1.mrna2.cds1;Name=FBgn0032741.1;Parent=FBgn0032741.1.mrna2;Target=FBgn0032741.1 1677 1531 .
Chr1	stalkie_big_nohaplotig	mRNA	86346891	86348654	.	+	.	ID=FBgn0025626.1.mrna1;Name=FBgn0025626.1;Parent=FBgn0025626.1.path1;Dir=sensecoverage=93.8;identity=100.0;matches=1640;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	86346891	86347053	100	+	.	ID=FBgn0025626.1.mrna1.exon1;Name=FBgn0025626.1;Parent=FBgn0025626.1.mrna1;Target=FBgn0025626.1 1 163 +
Chr1	stalkie_big_nohaplotig	exon	86347105	86347321	100	+	.	ID=FBgn0025626.1.mrna1.exon2;Name=FBgn0025626.1;Parent=FBgn0025626.1.mrna1;Target=FBgn0025626.1 164 380 +
Chr1	stalkie_big_nohaplotig	exon	86347395	86348654	100	+	.	ID=FBgn0025626.1.mrna1.exon3;Name=FBgn0025626.1;Parent=FBgn0025626.1.mrna1;Target=FBgn0025626.1 381 1640 +
Chr1	stalkie_big_nohaplotig	CDS	86346891	86347053	100	+	0	ID=FBgn0025626.1.mrna1.cds1;Name=FBgn0025626.1;Parent=FBgn0025626.1.mrna1;Target=FBgn0025626.1 1 163 +
Chr1	stalkie_big_nohaplotig	CDS	86347105	86347321	100	+	1	ID=FBgn0025626.1.mrna1.cds2;Name=FBgn0025626.1;Parent=FBgn0025626.1.mrna1;Target=FBgn0025626.1 164 380 +
Chr1	stalkie_big_nohaplotig	CDS	86347395	86348652	100	+	2	ID=FBgn0025626.1.mrna1.cds3;Name=FBgn0025626.1;Parent=FBgn0025626.1.mrna1;Target=FBgn0025626.1 381 1638 +
Chr1	stalkie_big_nohaplotig	mRNA	53417469	53440985	.	-	.	ID=FBgn0036368.1.mrna1;Name=FBgn0036368.1;Parent=FBgn0036368.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=3711;mismatches=9;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	53440763	53440985	100	-	.	ID=FBgn0036368.1.mrna1.exon1;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 1 223 +
Chr1	stalkie_big_nohaplotig	exon	53440447	53440685	100	-	.	ID=FBgn0036368.1.mrna1.exon2;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 224 462 +
Chr1	stalkie_big_nohaplotig	exon	53440244	53440366	99	-	.	ID=FBgn0036368.1.mrna1.exon3;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 463 585 +
Chr1	stalkie_big_nohaplotig	exon	53439898	53440084	100	-	.	ID=FBgn0036368.1.mrna1.exon4;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 586 772 +
Chr1	stalkie_big_nohaplotig	exon	53436945	53437195	100	-	.	ID=FBgn0036368.1.mrna1.exon5;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 773 1023 +
Chr1	stalkie_big_nohaplotig	exon	53431646	53431717	100	-	.	ID=FBgn0036368.1.mrna1.exon6;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 1024 1095 +
Chr1	stalkie_big_nohaplotig	exon	53431228	53431373	100	-	.	ID=FBgn0036368.1.mrna1.exon7;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 1096 1241 +
Chr1	stalkie_big_nohaplotig	exon	53429111	53429258	99	-	.	ID=FBgn0036368.1.mrna1.exon8;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 1242 1389 +
Chr1	stalkie_big_nohaplotig	exon	53428707	53428797	100	-	.	ID=FBgn0036368.1.mrna1.exon9;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 1390 1480 +
Chr1	stalkie_big_nohaplotig	exon	53428429	53428616	99	-	.	ID=FBgn0036368.1.mrna1.exon10;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 1481 1668 +
Chr1	stalkie_big_nohaplotig	exon	53426147	53426326	99	-	.	ID=FBgn0036368.1.mrna1.exon11;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 1669 1848 +
Chr1	stalkie_big_nohaplotig	exon	53424159	53424263	100	-	.	ID=FBgn0036368.1.mrna1.exon12;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 1849 1953 +
Chr1	stalkie_big_nohaplotig	exon	53423886	53423957	100	-	.	ID=FBgn0036368.1.mrna1.exon13;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 1954 2025 +
Chr1	stalkie_big_nohaplotig	exon	53423507	53423681	100	-	.	ID=FBgn0036368.1.mrna1.exon14;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 2026 2200 +
Chr1	stalkie_big_nohaplotig	exon	53419101	53419801	99	-	.	ID=FBgn0036368.1.mrna1.exon15;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 2201 2901 +
Chr1	stalkie_big_nohaplotig	exon	53418731	53419042	100	-	.	ID=FBgn0036368.1.mrna1.exon16;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 2902 3213 +
Chr1	stalkie_big_nohaplotig	exon	53417728	53418032	99	-	.	ID=FBgn0036368.1.mrna1.exon17;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 3214 3518 +
Chr1	stalkie_big_nohaplotig	exon	53417469	53417670	99	-	.	ID=FBgn0036368.1.mrna1.exon18;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 3519 3720 +
Chr1	stalkie_big_nohaplotig	CDS	53440763	53440985	100	-	0	ID=FBgn0036368.1.mrna1.cds1;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 1 223 +
Chr1	stalkie_big_nohaplotig	CDS	53440447	53440685	100	-	1	ID=FBgn0036368.1.mrna1.cds2;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 224 462 +
Chr1	stalkie_big_nohaplotig	CDS	53440244	53440366	99	-	0	ID=FBgn0036368.1.mrna1.cds3;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 463 585 +
Chr1	stalkie_big_nohaplotig	CDS	53439898	53440084	100	-	0	ID=FBgn0036368.1.mrna1.cds4;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 586 772 +
Chr1	stalkie_big_nohaplotig	CDS	53436945	53437195	100	-	1	ID=FBgn0036368.1.mrna1.cds5;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 773 1023 +
Chr1	stalkie_big_nohaplotig	CDS	53431646	53431717	100	-	0	ID=FBgn0036368.1.mrna1.cds6;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 1024 1095 +
Chr1	stalkie_big_nohaplotig	CDS	53431228	53431373	100	-	0	ID=FBgn0036368.1.mrna1.cds7;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 1096 1241 +
Chr1	stalkie_big_nohaplotig	CDS	53429111	53429258	99	-	2	ID=FBgn0036368.1.mrna1.cds8;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 1242 1389 +
Chr1	stalkie_big_nohaplotig	CDS	53428707	53428797	100	-	0	ID=FBgn0036368.1.mrna1.cds9;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 1390 1480 +
Chr1	stalkie_big_nohaplotig	CDS	53428429	53428616	99	-	1	ID=FBgn0036368.1.mrna1.cds10;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 1481 1668 +
Chr1	stalkie_big_nohaplotig	CDS	53426147	53426326	99	-	0	ID=FBgn0036368.1.mrna1.cds11;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 1669 1848 +
Chr1	stalkie_big_nohaplotig	CDS	53424159	53424263	100	-	0	ID=FBgn0036368.1.mrna1.cds12;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 1849 1953 +
Chr1	stalkie_big_nohaplotig	CDS	53423886	53423957	100	-	0	ID=FBgn0036368.1.mrna1.cds13;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 1954 2025 +
Chr1	stalkie_big_nohaplotig	CDS	53423507	53423681	100	-	0	ID=FBgn0036368.1.mrna1.cds14;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 2026 2200 +
Chr1	stalkie_big_nohaplotig	CDS	53419101	53419801	99	-	1	ID=FBgn0036368.1.mrna1.cds15;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 2201 2901 +
Chr1	stalkie_big_nohaplotig	CDS	53418731	53419042	100	-	0	ID=FBgn0036368.1.mrna1.cds16;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 2902 3213 +
Chr1	stalkie_big_nohaplotig	CDS	53417728	53418032	99	-	0	ID=FBgn0036368.1.mrna1.cds17;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 3214 3518 +
Chr1	stalkie_big_nohaplotig	CDS	53417469	53417670	99	-	2	ID=FBgn0036368.1.mrna1.cds18;Name=FBgn0036368.1;Parent=FBgn0036368.1.mrna1;Target=FBgn0036368.1 3519 3720 +
ChrX	stalkie_big_nohaplotig	mRNA	32997348	33010087	.	-	.	ID=FBgn0053509.1.mrna1;Name=FBgn0053509.1;Parent=FBgn0053509.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1302;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	33009806	33010087	100	-	.	ID=FBgn0053509.1.mrna1.exon1;Name=FBgn0053509.1;Parent=FBgn0053509.1.mrna1;Target=FBgn0053509.1 1 282 +
ChrX	stalkie_big_nohaplotig	exon	33009597	33009726	100	-	.	ID=FBgn0053509.1.mrna1.exon2;Name=FBgn0053509.1;Parent=FBgn0053509.1.mrna1;Target=FBgn0053509.1 283 412 +
ChrX	stalkie_big_nohaplotig	exon	32997348	32998237	100	-	.	ID=FBgn0053509.1.mrna1.exon3;Name=FBgn0053509.1;Parent=FBgn0053509.1.mrna1;Target=FBgn0053509.1 413 1302 +
ChrX	stalkie_big_nohaplotig	CDS	33009806	33010087	100	-	0	ID=FBgn0053509.1.mrna1.cds1;Name=FBgn0053509.1;Parent=FBgn0053509.1.mrna1;Target=FBgn0053509.1 1 282 +
ChrX	stalkie_big_nohaplotig	CDS	33009597	33009726	100	-	0	ID=FBgn0053509.1.mrna1.cds2;Name=FBgn0053509.1;Parent=FBgn0053509.1.mrna1;Target=FBgn0053509.1 283 412 +
ChrX	stalkie_big_nohaplotig	CDS	32997348	32998237	100	-	1	ID=FBgn0053509.1.mrna1.cds3;Name=FBgn0053509.1;Parent=FBgn0053509.1.mrna1;Target=FBgn0053509.1 413 1302 +
ChrX	stalkie_big_nohaplotig	mRNA	32994407	32996933	.	-	.	ID=FBgn0053510.1.mrna1;Name=FBgn0053510.1;Parent=FBgn0053510.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1275;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	32996706	32996933	100	-	.	ID=FBgn0053510.1.mrna1.exon1;Name=FBgn0053510.1;Parent=FBgn0053510.1.mrna1;Target=FBgn0053510.1 1 228 +
ChrX	stalkie_big_nohaplotig	exon	32996512	32996638	100	-	.	ID=FBgn0053510.1.mrna1.exon2;Name=FBgn0053510.1;Parent=FBgn0053510.1.mrna1;Target=FBgn0053510.1 229 355 +
ChrX	stalkie_big_nohaplotig	exon	32995116	32995390	100	-	.	ID=FBgn0053510.1.mrna1.exon3;Name=FBgn0053510.1;Parent=FBgn0053510.1.mrna1;Target=FBgn0053510.1 356 630 +
ChrX	stalkie_big_nohaplotig	exon	32994407	32995051	100	-	.	ID=FBgn0053510.1.mrna1.exon4;Name=FBgn0053510.1;Parent=FBgn0053510.1.mrna1;Target=FBgn0053510.1 631 1275 +
ChrX	stalkie_big_nohaplotig	CDS	32996706	32996933	100	-	0	ID=FBgn0053510.1.mrna1.cds1;Name=FBgn0053510.1;Parent=FBgn0053510.1.mrna1;Target=FBgn0053510.1 1 228 +
ChrX	stalkie_big_nohaplotig	CDS	32996512	32996638	100	-	0	ID=FBgn0053510.1.mrna1.cds2;Name=FBgn0053510.1;Parent=FBgn0053510.1.mrna1;Target=FBgn0053510.1 229 355 +
ChrX	stalkie_big_nohaplotig	CDS	32995116	32995390	100	-	1	ID=FBgn0053510.1.mrna1.cds3;Name=FBgn0053510.1;Parent=FBgn0053510.1.mrna1;Target=FBgn0053510.1 356 630 +
ChrX	stalkie_big_nohaplotig	CDS	32994407	32995051	100	-	0	ID=FBgn0053510.1.mrna1.cds4;Name=FBgn0053510.1;Parent=FBgn0053510.1.mrna1;Target=FBgn0053510.1 631 1275 +
Chr1	stalkie_big_nohaplotig	mRNA	39736882	39754825	.	-	.	ID=FBgn0010350.1.mrna1;Name=FBgn0010350.1;Parent=FBgn0010350.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1356;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	39754700	39754825	100	-	.	ID=FBgn0010350.1.mrna1.exon1;Name=FBgn0010350.1;Parent=FBgn0010350.1.mrna1;Target=FBgn0010350.1 1 126 +
Chr1	stalkie_big_nohaplotig	exon	39741118	39741242	100	-	.	ID=FBgn0010350.1.mrna1.exon2;Name=FBgn0010350.1;Parent=FBgn0010350.1.mrna1;Target=FBgn0010350.1 127 251 +
Chr1	stalkie_big_nohaplotig	exon	39740810	39740906	100	-	.	ID=FBgn0010350.1.mrna1.exon3;Name=FBgn0010350.1;Parent=FBgn0010350.1.mrna1;Target=FBgn0010350.1 252 348 +
Chr1	stalkie_big_nohaplotig	exon	39739200	39739376	100	-	.	ID=FBgn0010350.1.mrna1.exon4;Name=FBgn0010350.1;Parent=FBgn0010350.1.mrna1;Target=FBgn0010350.1 349 525 +
Chr1	stalkie_big_nohaplotig	exon	39738942	39739134	100	-	.	ID=FBgn0010350.1.mrna1.exon5;Name=FBgn0010350.1;Parent=FBgn0010350.1.mrna1;Target=FBgn0010350.1 526 718 +
Chr1	stalkie_big_nohaplotig	exon	39738569	39738864	100	-	.	ID=FBgn0010350.1.mrna1.exon6;Name=FBgn0010350.1;Parent=FBgn0010350.1.mrna1;Target=FBgn0010350.1 719 1014 +
Chr1	stalkie_big_nohaplotig	exon	39737612	39737743	100	-	.	ID=FBgn0010350.1.mrna1.exon7;Name=FBgn0010350.1;Parent=FBgn0010350.1.mrna1;Target=FBgn0010350.1 1015 1146 +
Chr1	stalkie_big_nohaplotig	exon	39737418	39737552	100	-	.	ID=FBgn0010350.1.mrna1.exon8;Name=FBgn0010350.1;Parent=FBgn0010350.1.mrna1;Target=FBgn0010350.1 1147 1281 +
Chr1	stalkie_big_nohaplotig	exon	39736882	39736956	100	-	.	ID=FBgn0010350.1.mrna1.exon9;Name=FBgn0010350.1;Parent=FBgn0010350.1.mrna1;Target=FBgn0010350.1 1282 1356 +
Chr1	stalkie_big_nohaplotig	CDS	39754700	39754825	100	-	0	ID=FBgn0010350.1.mrna1.cds1;Name=FBgn0010350.1;Parent=FBgn0010350.1.mrna1;Target=FBgn0010350.1 1 126 +
Chr1	stalkie_big_nohaplotig	CDS	39741118	39741242	100	-	0	ID=FBgn0010350.1.mrna1.cds2;Name=FBgn0010350.1;Parent=FBgn0010350.1.mrna1;Target=FBgn0010350.1 127 251 +
Chr1	stalkie_big_nohaplotig	CDS	39740810	39740906	100	-	2	ID=FBgn0010350.1.mrna1.cds3;Name=FBgn0010350.1;Parent=FBgn0010350.1.mrna1;Target=FBgn0010350.1 252 348 +
Chr1	stalkie_big_nohaplotig	CDS	39739200	39739376	100	-	0	ID=FBgn0010350.1.mrna1.cds4;Name=FBgn0010350.1;Parent=FBgn0010350.1.mrna1;Target=FBgn0010350.1 349 525 +
Chr1	stalkie_big_nohaplotig	CDS	39738942	39739134	100	-	0	ID=FBgn0010350.1.mrna1.cds5;Name=FBgn0010350.1;Parent=FBgn0010350.1.mrna1;Target=FBgn0010350.1 526 718 +
Chr1	stalkie_big_nohaplotig	CDS	39738569	39738864	100	-	1	ID=FBgn0010350.1.mrna1.cds6;Name=FBgn0010350.1;Parent=FBgn0010350.1.mrna1;Target=FBgn0010350.1 719 1014 +
Chr1	stalkie_big_nohaplotig	CDS	39737612	39737743	100	-	0	ID=FBgn0010350.1.mrna1.cds7;Name=FBgn0010350.1;Parent=FBgn0010350.1.mrna1;Target=FBgn0010350.1 1015 1146 +
Chr1	stalkie_big_nohaplotig	CDS	39737418	39737552	100	-	0	ID=FBgn0010350.1.mrna1.cds8;Name=FBgn0010350.1;Parent=FBgn0010350.1.mrna1;Target=FBgn0010350.1 1147 1281 +
Chr1	stalkie_big_nohaplotig	CDS	39736882	39736956	100	-	0	ID=FBgn0010350.1.mrna1.cds9;Name=FBgn0010350.1;Parent=FBgn0010350.1.mrna1;Target=FBgn0010350.1 1282 1356 +
Chr1	stalkie_big_nohaplotig	mRNA	39709996	39716920	.	+	.	ID=FBgn0035842.1.mrna1;Name=FBgn0035842.1;Parent=FBgn0035842.1.path1;Dir=sensecoverage=99.7;identity=99.9;matches=3288;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	39709996	39711287	99	+	.	ID=FBgn0035842.1.mrna1.exon1;Name=FBgn0035842.1;Parent=FBgn0035842.1.mrna1;Target=FBgn0035842.1 10 1301 +
Chr1	stalkie_big_nohaplotig	exon	39711380	39711516	100	+	.	ID=FBgn0035842.1.mrna1.exon2;Name=FBgn0035842.1;Parent=FBgn0035842.1.mrna1;Target=FBgn0035842.1 1302 1438 +
Chr1	stalkie_big_nohaplotig	exon	39711938	39712054	100	+	.	ID=FBgn0035842.1.mrna1.exon3;Name=FBgn0035842.1;Parent=FBgn0035842.1.mrna1;Target=FBgn0035842.1 1439 1555 +
Chr1	stalkie_big_nohaplotig	exon	39713093	39713745	99	+	.	ID=FBgn0035842.1.mrna1.exon4;Name=FBgn0035842.1;Parent=FBgn0035842.1.mrna1;Target=FBgn0035842.1 1556 2208 +
Chr1	stalkie_big_nohaplotig	exon	39713806	39714017	100	+	.	ID=FBgn0035842.1.mrna1.exon5;Name=FBgn0035842.1;Parent=FBgn0035842.1.mrna1;Target=FBgn0035842.1 2209 2420 +
Chr1	stalkie_big_nohaplotig	exon	39714794	39714938	100	+	.	ID=FBgn0035842.1.mrna1.exon6;Name=FBgn0035842.1;Parent=FBgn0035842.1.mrna1;Target=FBgn0035842.1 2421 2565 +
Chr1	stalkie_big_nohaplotig	exon	39715050	39715450	100	+	.	ID=FBgn0035842.1.mrna1.exon7;Name=FBgn0035842.1;Parent=FBgn0035842.1.mrna1;Target=FBgn0035842.1 2566 2966 +
Chr1	stalkie_big_nohaplotig	exon	39716526	39716715	100	+	.	ID=FBgn0035842.1.mrna1.exon8;Name=FBgn0035842.1;Parent=FBgn0035842.1.mrna1;Target=FBgn0035842.1 2967 3156 +
Chr1	stalkie_big_nohaplotig	exon	39716777	39716920	100	+	.	ID=FBgn0035842.1.mrna1.exon9;Name=FBgn0035842.1;Parent=FBgn0035842.1.mrna1;Target=FBgn0035842.1 3157 3300 +
Chr1	stalkie_big_nohaplotig	CDS	39709996	39711287	99	+	0	ID=FBgn0035842.1.mrna1.cds1;Name=FBgn0035842.1;Parent=FBgn0035842.1.mrna1;Target=FBgn0035842.1 10 1301 +
Chr1	stalkie_big_nohaplotig	CDS	39711380	39711516	100	+	2	ID=FBgn0035842.1.mrna1.cds2;Name=FBgn0035842.1;Parent=FBgn0035842.1.mrna1;Target=FBgn0035842.1 1302 1438 +
Chr1	stalkie_big_nohaplotig	CDS	39711938	39712054	100	+	1	ID=FBgn0035842.1.mrna1.cds3;Name=FBgn0035842.1;Parent=FBgn0035842.1.mrna1;Target=FBgn0035842.1 1439 1555 +
Chr1	stalkie_big_nohaplotig	CDS	39713093	39713745	99	+	1	ID=FBgn0035842.1.mrna1.cds4;Name=FBgn0035842.1;Parent=FBgn0035842.1.mrna1;Target=FBgn0035842.1 1556 2208 +
Chr1	stalkie_big_nohaplotig	CDS	39713806	39714017	100	+	0	ID=FBgn0035842.1.mrna1.cds5;Name=FBgn0035842.1;Parent=FBgn0035842.1.mrna1;Target=FBgn0035842.1 2209 2420 +
Chr1	stalkie_big_nohaplotig	CDS	39714794	39714938	100	+	2	ID=FBgn0035842.1.mrna1.cds6;Name=FBgn0035842.1;Parent=FBgn0035842.1.mrna1;Target=FBgn0035842.1 2421 2565 +
Chr1	stalkie_big_nohaplotig	CDS	39715050	39715450	100	+	0	ID=FBgn0035842.1.mrna1.cds7;Name=FBgn0035842.1;Parent=FBgn0035842.1.mrna1;Target=FBgn0035842.1 2566 2966 +
Chr1	stalkie_big_nohaplotig	CDS	39716526	39716715	100	+	2	ID=FBgn0035842.1.mrna1.cds8;Name=FBgn0035842.1;Parent=FBgn0035842.1.mrna1;Target=FBgn0035842.1 2967 3156 +
Chr1	stalkie_big_nohaplotig	CDS	39716777	39716920	100	+	0	ID=FBgn0035842.1.mrna1.cds9;Name=FBgn0035842.1;Parent=FBgn0035842.1.mrna1;Target=FBgn0035842.1 3157 3300 +
Chr1	stalkie_big_nohaplotig	mRNA	19643310	19657434	.	+	.	ID=FBgn0035235.1.mrna1;Name=FBgn0035235.1;Parent=FBgn0035235.1.path1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=3746;mismatches=16;indels=6;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	19643310	19643473	100	+	.	ID=FBgn0035235.1.mrna1.exon1;Name=FBgn0035235.1;Parent=FBgn0035235.1.mrna1;Target=FBgn0035235.1 164 1 .
Chr1	stalkie_big_nohaplotig	exon	19653837	19657434	99	+	.	ID=FBgn0035235.1.mrna1.exon2;Name=FBgn0035235.1;Parent=FBgn0035235.1.mrna1;Target=FBgn0035235.1 3768 165 .
Chr1	stalkie_big_nohaplotig	CDS	19643310	19643473	100	+	0	ID=FBgn0035235.1.mrna1.cds1;Name=FBgn0035235.1;Parent=FBgn0035235.1.mrna1;Target=FBgn0035235.1 164 1 .
Chr1	stalkie_big_nohaplotig	CDS	19653837	19657434	99	+	2	ID=FBgn0035235.1.mrna1.cds2;Name=FBgn0035235.1;Parent=FBgn0035235.1.mrna1;Target=FBgn0035235.1 3768 165 .
Chr2	stalkie_big_nohaplotig	mRNA	5714632	5717550	.	+	.	ID=FBgn0024232.1.mrna1;Name=FBgn0024232.1;Parent=FBgn0024232.1.path1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=2907;mismatches=12;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	5714632	5717550	99	+	.	ID=FBgn0024232.1.mrna1.exon1;Name=FBgn0024232.1;Parent=FBgn0024232.1.mrna1;Target=FBgn0024232.1 2919 1 .
Chr2	stalkie_big_nohaplotig	CDS	5714632	5717550	99	+	0	ID=FBgn0024232.1.mrna1.cds1;Name=FBgn0024232.1;Parent=FBgn0024232.1.mrna1;Target=FBgn0024232.1 2919 1 .
Chr1	stalkie_big_nohaplotig	mRNA	28816322	28820104	.	+	.	ID=FBgn0052054.1.mrna1;Name=FBgn0052054.1;Parent=FBgn0052054.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=1415;mismatches=10;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	28816322	28816475	99	+	.	ID=FBgn0052054.1.mrna1.exon1;Name=FBgn0052054.1;Parent=FBgn0052054.1.mrna1;Target=FBgn0052054.1 1 154 +
Chr1	stalkie_big_nohaplotig	exon	28818782	28818933	99	+	.	ID=FBgn0052054.1.mrna1.exon2;Name=FBgn0052054.1;Parent=FBgn0052054.1.mrna1;Target=FBgn0052054.1 155 306 +
Chr1	stalkie_big_nohaplotig	exon	28818986	28820104	99	+	.	ID=FBgn0052054.1.mrna1.exon3;Name=FBgn0052054.1;Parent=FBgn0052054.1.mrna1;Target=FBgn0052054.1 307 1425 +
Chr1	stalkie_big_nohaplotig	CDS	28816322	28816475	99	+	0	ID=FBgn0052054.1.mrna1.cds1;Name=FBgn0052054.1;Parent=FBgn0052054.1.mrna1;Target=FBgn0052054.1 1 154 +
Chr1	stalkie_big_nohaplotig	CDS	28818782	28818933	99	+	1	ID=FBgn0052054.1.mrna1.cds2;Name=FBgn0052054.1;Parent=FBgn0052054.1.mrna1;Target=FBgn0052054.1 155 306 +
Chr1	stalkie_big_nohaplotig	CDS	28818986	28820104	99	+	0	ID=FBgn0052054.1.mrna1.cds3;Name=FBgn0052054.1;Parent=FBgn0052054.1.mrna1;Target=FBgn0052054.1 307 1425 +
ChrX	stalkie_big_nohaplotig	mRNA	49138648	49145866	.	-	.	ID=ORF2429.mrna1;Name=ORF2429;Parent=ORF2429.path1;Dir=sensecoverage=100.0;identity=100.0;matches=861;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	49145808	49145866	100	-	.	ID=ORF2429.mrna1.exon1;Name=ORF2429;Parent=ORF2429.mrna1;Target=ORF2429 1 59 +
ChrX	stalkie_big_nohaplotig	exon	49145528	49145722	100	-	.	ID=ORF2429.mrna1.exon2;Name=ORF2429;Parent=ORF2429.mrna1;Target=ORF2429 60 254 +
ChrX	stalkie_big_nohaplotig	exon	49145317	49145473	100	-	.	ID=ORF2429.mrna1.exon3;Name=ORF2429;Parent=ORF2429.mrna1;Target=ORF2429 255 411 +
ChrX	stalkie_big_nohaplotig	exon	49145026	49145226	100	-	.	ID=ORF2429.mrna1.exon4;Name=ORF2429;Parent=ORF2429.mrna1;Target=ORF2429 412 612 +
ChrX	stalkie_big_nohaplotig	exon	49138883	49138966	100	-	.	ID=ORF2429.mrna1.exon5;Name=ORF2429;Parent=ORF2429.mrna1;Target=ORF2429 613 696 +
ChrX	stalkie_big_nohaplotig	exon	49138648	49138812	100	-	.	ID=ORF2429.mrna1.exon6;Name=ORF2429;Parent=ORF2429.mrna1;Target=ORF2429 697 861 +
ChrX	stalkie_big_nohaplotig	CDS	49145808	49145866	100	-	0	ID=ORF2429.mrna1.cds1;Name=ORF2429;Parent=ORF2429.mrna1;Target=ORF2429 1 59 +
ChrX	stalkie_big_nohaplotig	CDS	49145528	49145722	100	-	2	ID=ORF2429.mrna1.cds2;Name=ORF2429;Parent=ORF2429.mrna1;Target=ORF2429 60 254 +
ChrX	stalkie_big_nohaplotig	CDS	49145317	49145473	100	-	2	ID=ORF2429.mrna1.cds3;Name=ORF2429;Parent=ORF2429.mrna1;Target=ORF2429 255 411 +
ChrX	stalkie_big_nohaplotig	CDS	49145026	49145226	100	-	0	ID=ORF2429.mrna1.cds4;Name=ORF2429;Parent=ORF2429.mrna1;Target=ORF2429 412 612 +
ChrX	stalkie_big_nohaplotig	CDS	49138883	49138966	100	-	0	ID=ORF2429.mrna1.cds5;Name=ORF2429;Parent=ORF2429.mrna1;Target=ORF2429 613 696 +
ChrX	stalkie_big_nohaplotig	CDS	49138648	49138812	100	-	0	ID=ORF2429.mrna1.cds6;Name=ORF2429;Parent=ORF2429.mrna1;Target=ORF2429 697 861 +
Chr2	stalkie_big_nohaplotig	mRNA	112164966	112167144	.	-	.	ID=FBgn0051109.1.mrna1;Name=FBgn0051109.1;Parent=FBgn0051109.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=460;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	112166992	112167144	100	-	.	ID=FBgn0051109.1.mrna1.exon1;Name=FBgn0051109.1;Parent=FBgn0051109.1.mrna1;Target=FBgn0051109.1 1 153 +
Chr2	stalkie_big_nohaplotig	exon	112166815	112166940	99	-	.	ID=FBgn0051109.1.mrna1.exon2;Name=FBgn0051109.1;Parent=FBgn0051109.1.mrna1;Target=FBgn0051109.1 154 279 +
Chr2	stalkie_big_nohaplotig	exon	112164966	112165148	99	-	.	ID=FBgn0051109.1.mrna1.exon3;Name=FBgn0051109.1;Parent=FBgn0051109.1.mrna1;Target=FBgn0051109.1 280 462 +
Chr2	stalkie_big_nohaplotig	CDS	112166992	112167144	100	-	0	ID=FBgn0051109.1.mrna1.cds1;Name=FBgn0051109.1;Parent=FBgn0051109.1.mrna1;Target=FBgn0051109.1 1 153 +
Chr2	stalkie_big_nohaplotig	CDS	112166815	112166940	99	-	0	ID=FBgn0051109.1.mrna1.cds2;Name=FBgn0051109.1;Parent=FBgn0051109.1.mrna1;Target=FBgn0051109.1 154 279 +
Chr2	stalkie_big_nohaplotig	CDS	112164966	112165148	99	-	0	ID=FBgn0051109.1.mrna1.cds3;Name=FBgn0051109.1;Parent=FBgn0051109.1.mrna1;Target=FBgn0051109.1 280 462 +
Chr2	stalkie_big_nohaplotig	mRNA	112244728	112245383	.	+	.	ID=FBgn0086378.1.mrna1;Name=FBgn0086378.1;Parent=FBgn0086378.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=546;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	112244728	112244798	100	+	.	ID=FBgn0086378.1.mrna1.exon1;Name=FBgn0086378.1;Parent=FBgn0086378.1.mrna1;Target=FBgn0086378.1 1 71 +
Chr2	stalkie_big_nohaplotig	exon	112244850	112245225	100	+	.	ID=FBgn0086378.1.mrna1.exon2;Name=FBgn0086378.1;Parent=FBgn0086378.1.mrna1;Target=FBgn0086378.1 72 447 +
Chr2	stalkie_big_nohaplotig	exon	112245285	112245383	100	+	.	ID=FBgn0086378.1.mrna1.exon3;Name=FBgn0086378.1;Parent=FBgn0086378.1.mrna1;Target=FBgn0086378.1 448 546 +
Chr2	stalkie_big_nohaplotig	CDS	112244728	112244798	100	+	0	ID=FBgn0086378.1.mrna1.cds1;Name=FBgn0086378.1;Parent=FBgn0086378.1.mrna1;Target=FBgn0086378.1 1 71 +
Chr2	stalkie_big_nohaplotig	CDS	112244850	112245225	100	+	2	ID=FBgn0086378.1.mrna1.cds2;Name=FBgn0086378.1;Parent=FBgn0086378.1.mrna1;Target=FBgn0086378.1 72 447 +
Chr2	stalkie_big_nohaplotig	CDS	112245285	112245383	100	+	0	ID=FBgn0086378.1.mrna1.cds3;Name=FBgn0086378.1;Parent=FBgn0086378.1.mrna1;Target=FBgn0086378.1 448 546 +
Chr2	stalkie_big_nohaplotig	mRNA	112130417	112142750	.	-	.	ID=FBgn0040056.1.mrna1;Name=FBgn0040056.1;Parent=FBgn0040056.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1834;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	112142249	112142750	99	-	.	ID=FBgn0040056.1.mrna1.exon1;Name=FBgn0040056.1;Parent=FBgn0040056.1.mrna1;Target=FBgn0040056.1 1 502 +
Chr2	stalkie_big_nohaplotig	exon	112139592	112139773	100	-	.	ID=FBgn0040056.1.mrna1.exon2;Name=FBgn0040056.1;Parent=FBgn0040056.1.mrna1;Target=FBgn0040056.1 503 684 +
Chr2	stalkie_big_nohaplotig	exon	112139181	112139535	100	-	.	ID=FBgn0040056.1.mrna1.exon3;Name=FBgn0040056.1;Parent=FBgn0040056.1.mrna1;Target=FBgn0040056.1 685 1039 +
Chr2	stalkie_big_nohaplotig	exon	112136062	112136249	100	-	.	ID=FBgn0040056.1.mrna1.exon4;Name=FBgn0040056.1;Parent=FBgn0040056.1.mrna1;Target=FBgn0040056.1 1040 1227 +
Chr2	stalkie_big_nohaplotig	exon	112131011	112131244	100	-	.	ID=FBgn0040056.1.mrna1.exon5;Name=FBgn0040056.1;Parent=FBgn0040056.1.mrna1;Target=FBgn0040056.1 1228 1461 +
Chr2	stalkie_big_nohaplotig	exon	112130660	112130949	100	-	.	ID=FBgn0040056.1.mrna1.exon6;Name=FBgn0040056.1;Parent=FBgn0040056.1.mrna1;Target=FBgn0040056.1 1462 1751 +
Chr2	stalkie_big_nohaplotig	exon	112130417	112130501	100	-	.	ID=FBgn0040056.1.mrna1.exon7;Name=FBgn0040056.1;Parent=FBgn0040056.1.mrna1;Target=FBgn0040056.1 1752 1836 +
Chr2	stalkie_big_nohaplotig	CDS	112142249	112142750	99	-	0	ID=FBgn0040056.1.mrna1.cds1;Name=FBgn0040056.1;Parent=FBgn0040056.1.mrna1;Target=FBgn0040056.1 1 502 +
Chr2	stalkie_big_nohaplotig	CDS	112139592	112139773	100	-	1	ID=FBgn0040056.1.mrna1.cds2;Name=FBgn0040056.1;Parent=FBgn0040056.1.mrna1;Target=FBgn0040056.1 503 684 +
Chr2	stalkie_big_nohaplotig	CDS	112139181	112139535	100	-	0	ID=FBgn0040056.1.mrna1.cds3;Name=FBgn0040056.1;Parent=FBgn0040056.1.mrna1;Target=FBgn0040056.1 685 1039 +
Chr2	stalkie_big_nohaplotig	CDS	112136062	112136249	100	-	1	ID=FBgn0040056.1.mrna1.cds4;Name=FBgn0040056.1;Parent=FBgn0040056.1.mrna1;Target=FBgn0040056.1 1040 1227 +
Chr2	stalkie_big_nohaplotig	CDS	112131011	112131244	100	-	0	ID=FBgn0040056.1.mrna1.cds5;Name=FBgn0040056.1;Parent=FBgn0040056.1.mrna1;Target=FBgn0040056.1 1228 1461 +
Chr2	stalkie_big_nohaplotig	CDS	112130660	112130949	100	-	0	ID=FBgn0040056.1.mrna1.cds6;Name=FBgn0040056.1;Parent=FBgn0040056.1.mrna1;Target=FBgn0040056.1 1462 1751 +
Chr2	stalkie_big_nohaplotig	CDS	112130417	112130501	100	-	2	ID=FBgn0040056.1.mrna1.cds7;Name=FBgn0040056.1;Parent=FBgn0040056.1.mrna1;Target=FBgn0040056.1 1752 1836 +
Chr1	stalkie_big_nohaplotig	mRNA	116013447	116014612	.	-	.	ID=ORF1246.mrna1;Name=ORF1246;Parent=ORF1246.path1;Dir=indeterminatecoverage=100.0;identity=98.4;matches=1148;mismatches=18;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	116013447	116014612	98	-	.	ID=ORF1246.mrna1.exon1;Name=ORF1246;Parent=ORF1246.mrna1;Target=ORF1246 1167 1 .
Chr1	stalkie_big_nohaplotig	CDS	116013447	116014612	98	-	0	ID=ORF1246.mrna1.cds1;Name=ORF1246;Parent=ORF1246.mrna1;Target=ORF1246 1167 1 .
Chr1	stalkie_big_nohaplotig	mRNA	116049915	116052495	.	+	.	ID=FBgn0031143.1.mrna1;Name=FBgn0031143.1;Parent=FBgn0031143.1.path1;Dir=sensecoverage=98.7;identity=99.5;matches=861;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	116049915	116050014	100	+	.	ID=FBgn0031143.1.mrna1.exon1;Name=FBgn0031143.1;Parent=FBgn0031143.1.mrna1;Target=FBgn0031143.1 12 111 +
Chr1	stalkie_big_nohaplotig	exon	116050355	116050404	100	+	.	ID=FBgn0031143.1.mrna1.exon2;Name=FBgn0031143.1;Parent=FBgn0031143.1.mrna1;Target=FBgn0031143.1 112 161 +
Chr1	stalkie_big_nohaplotig	exon	116050460	116050566	100	+	.	ID=FBgn0031143.1.mrna1.exon3;Name=FBgn0031143.1;Parent=FBgn0031143.1.mrna1;Target=FBgn0031143.1 162 268 +
Chr1	stalkie_big_nohaplotig	exon	116051888	116052495	99	+	.	ID=FBgn0031143.1.mrna1.exon4;Name=FBgn0031143.1;Parent=FBgn0031143.1.mrna1;Target=FBgn0031143.1 269 876 +
Chr1	stalkie_big_nohaplotig	CDS	116049916	116050014	100	+	0	ID=FBgn0031143.1.mrna1.cds1;Name=FBgn0031143.1;Parent=FBgn0031143.1.mrna1;Target=FBgn0031143.1 13 111 +
Chr1	stalkie_big_nohaplotig	CDS	116050355	116050404	100	+	0	ID=FBgn0031143.1.mrna1.cds2;Name=FBgn0031143.1;Parent=FBgn0031143.1.mrna1;Target=FBgn0031143.1 112 161 +
Chr1	stalkie_big_nohaplotig	CDS	116050460	116050566	100	+	2	ID=FBgn0031143.1.mrna1.cds3;Name=FBgn0031143.1;Parent=FBgn0031143.1.mrna1;Target=FBgn0031143.1 162 268 +
Chr1	stalkie_big_nohaplotig	CDS	116051888	116052495	99	+	1	ID=FBgn0031143.1.mrna1.cds4;Name=FBgn0031143.1;Parent=FBgn0031143.1.mrna1;Target=FBgn0031143.1 269 876 +
Chr1	stalkie_big_nohaplotig	mRNA	116165550	116166747	.	-	.	ID=ORF1807.mrna1;Name=ORF1807;Parent=ORF1807.path1;Dir=indeterminatecoverage=100.0;identity=97.4;matches=972;mismatches=17;indels=9;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	116166415	116166747	94	-	.	ID=ORF1807.mrna1.exon1;Name=ORF1807;Parent=ORF1807.mrna1;Target=ORF1807 332 1 .
Chr1	stalkie_big_nohaplotig	exon	116165550	116166210	98	-	.	ID=ORF1807.mrna1.exon2;Name=ORF1807;Parent=ORF1807.mrna1;Target=ORF1807 993 333 .
Chr1	stalkie_big_nohaplotig	CDS	116166415	116166431	70	-	0	ID=ORF1807.mrna1.cds1;Name=ORF1807;Parent=ORF1807.mrna1;Target=ORF1807 332 316 .
Chr1	stalkie_big_nohaplotig	CDS	116165550	116166210	98	-	2	ID=ORF1807.mrna1.cds2;Name=ORF1807;Parent=ORF1807.mrna1;Target=ORF1807 993 333 .
Chr1	stalkie_big_nohaplotig	mRNA	3993926	4002430	.	-	.	ID=FBgn0010406.1.mrna1;Name=FBgn0010406.1;Parent=FBgn0010406.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1020;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	4002327	4002430	100	-	.	ID=FBgn0010406.1.mrna1.exon1;Name=FBgn0010406.1;Parent=FBgn0010406.1.mrna1;Target=FBgn0010406.1 1 104 +
Chr1	stalkie_big_nohaplotig	exon	3993926	3994841	100	-	.	ID=FBgn0010406.1.mrna1.exon2;Name=FBgn0010406.1;Parent=FBgn0010406.1.mrna1;Target=FBgn0010406.1 105 1020 +
Chr1	stalkie_big_nohaplotig	CDS	4002327	4002430	100	-	0	ID=FBgn0010406.1.mrna1.cds1;Name=FBgn0010406.1;Parent=FBgn0010406.1.mrna1;Target=FBgn0010406.1 1 104 +
Chr1	stalkie_big_nohaplotig	CDS	3993926	3994841	100	-	2	ID=FBgn0010406.1.mrna1.cds2;Name=FBgn0010406.1;Parent=FBgn0010406.1.mrna1;Target=FBgn0010406.1 105 1020 +
Chr1	stalkie_big_nohaplotig	mRNA	4146620	4147950	.	-	.	ID=FBgn0028658.1.mrna1;Name=FBgn0028658.1;Parent=FBgn0028658.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1274;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	4147001	4147950	99	-	.	ID=FBgn0028658.1.mrna1.exon1;Name=FBgn0028658.1;Parent=FBgn0028658.1.mrna1;Target=FBgn0028658.1 1 950 +
Chr1	stalkie_big_nohaplotig	exon	4146620	4146947	100	-	.	ID=FBgn0028658.1.mrna1.exon2;Name=FBgn0028658.1;Parent=FBgn0028658.1.mrna1;Target=FBgn0028658.1 951 1278 +
Chr1	stalkie_big_nohaplotig	CDS	4147001	4147950	99	-	0	ID=FBgn0028658.1.mrna1.cds1;Name=FBgn0028658.1;Parent=FBgn0028658.1.mrna1;Target=FBgn0028658.1 1 950 +
Chr1	stalkie_big_nohaplotig	CDS	4146620	4146947	100	-	2	ID=FBgn0028658.1.mrna1.cds2;Name=FBgn0028658.1;Parent=FBgn0028658.1.mrna1;Target=FBgn0028658.1 951 1278 +
Chr2	stalkie_big_nohaplotig	mRNA	93025667	93026890	.	-	.	ID=FBgn0042102.4.mrna1;Name=FBgn0042102.4;Parent=FBgn0042102.4.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1041;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	93026770	93026890	100	-	.	ID=FBgn0042102.4.mrna1.exon1;Name=FBgn0042102.4;Parent=FBgn0042102.4.mrna1;Target=FBgn0042102.4 1 121 +
Chr2	stalkie_big_nohaplotig	exon	93026544	93026711	100	-	.	ID=FBgn0042102.4.mrna1.exon2;Name=FBgn0042102.4;Parent=FBgn0042102.4.mrna1;Target=FBgn0042102.4 122 289 +
Chr2	stalkie_big_nohaplotig	exon	93026272	93026486	99	-	.	ID=FBgn0042102.4.mrna1.exon3;Name=FBgn0042102.4;Parent=FBgn0042102.4.mrna1;Target=FBgn0042102.4 290 504 +
Chr2	stalkie_big_nohaplotig	exon	93025667	93026206	99	-	.	ID=FBgn0042102.4.mrna1.exon4;Name=FBgn0042102.4;Parent=FBgn0042102.4.mrna1;Target=FBgn0042102.4 505 1044 +
Chr2	stalkie_big_nohaplotig	CDS	93026770	93026890	100	-	0	ID=FBgn0042102.4.mrna1.cds1;Name=FBgn0042102.4;Parent=FBgn0042102.4.mrna1;Target=FBgn0042102.4 1 121 +
Chr2	stalkie_big_nohaplotig	CDS	93026544	93026711	100	-	1	ID=FBgn0042102.4.mrna1.cds2;Name=FBgn0042102.4;Parent=FBgn0042102.4.mrna1;Target=FBgn0042102.4 122 289 +
Chr2	stalkie_big_nohaplotig	CDS	93026272	93026486	99	-	1	ID=FBgn0042102.4.mrna1.cds3;Name=FBgn0042102.4;Parent=FBgn0042102.4.mrna1;Target=FBgn0042102.4 290 504 +
Chr2	stalkie_big_nohaplotig	CDS	93025667	93026206	99	-	0	ID=FBgn0042102.4.mrna1.cds4;Name=FBgn0042102.4;Parent=FBgn0042102.4.mrna1;Target=FBgn0042102.4 505 1044 +
Chr1	stalkie_big_nohaplotig	mRNA	375729	376727	.	-	.	ID=FBgn0036271.1.mrna1;Name=FBgn0036271.1;Parent=FBgn0036271.1.path1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=992;mismatches=7;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	375729	376727	99	-	.	ID=FBgn0036271.1.mrna1.exon1;Name=FBgn0036271.1;Parent=FBgn0036271.1.mrna1;Target=FBgn0036271.1 999 1 .
Chr1	stalkie_big_nohaplotig	CDS	375729	376727	99	-	0	ID=FBgn0036271.1.mrna1.cds1;Name=FBgn0036271.1;Parent=FBgn0036271.1.mrna1;Target=FBgn0036271.1 999 1 .
ChrX	stalkie_big_nohaplotig	mRNA	11690774	11704656	.	-	.	ID=FBgn0004611.1.mrna1;Name=FBgn0004611.1;Parent=FBgn0004611.1.path1;Dir=sensecoverage=96.8;identity=99.8;matches=2968;mismatches=4;indels=2;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	11704510	11704656	99	-	.	ID=FBgn0004611.1.mrna1.exon1;Name=FBgn0004611.1;Parent=FBgn0004611.1.mrna1;Target=FBgn0004611.1 99 246 +
ChrX	stalkie_big_nohaplotig	exon	11698524	11698661	100	-	.	ID=FBgn0004611.1.mrna1.exon2;Name=FBgn0004611.1;Parent=FBgn0004611.1.mrna1;Target=FBgn0004611.1 247 384 +
ChrX	stalkie_big_nohaplotig	exon	11697768	11697901	100	-	.	ID=FBgn0004611.1.mrna1.exon3;Name=FBgn0004611.1;Parent=FBgn0004611.1.mrna1;Target=FBgn0004611.1 385 518 +
ChrX	stalkie_big_nohaplotig	exon	11697500	11697685	99	-	.	ID=FBgn0004611.1.mrna1.exon4;Name=FBgn0004611.1;Parent=FBgn0004611.1.mrna1;Target=FBgn0004611.1 519 704 +
ChrX	stalkie_big_nohaplotig	exon	11697230	11697427	100	-	.	ID=FBgn0004611.1.mrna1.exon5;Name=FBgn0004611.1;Parent=FBgn0004611.1.mrna1;Target=FBgn0004611.1 705 902 +
ChrX	stalkie_big_nohaplotig	exon	11696247	11696429	100	-	.	ID=FBgn0004611.1.mrna1.exon6;Name=FBgn0004611.1;Parent=FBgn0004611.1.mrna1;Target=FBgn0004611.1 903 1085 +
ChrX	stalkie_big_nohaplotig	exon	11695996	11696176	100	-	.	ID=FBgn0004611.1.mrna1.exon7;Name=FBgn0004611.1;Parent=FBgn0004611.1.mrna1;Target=FBgn0004611.1 1086 1266 +
ChrX	stalkie_big_nohaplotig	exon	11694462	11694693	99	-	.	ID=FBgn0004611.1.mrna1.exon8;Name=FBgn0004611.1;Parent=FBgn0004611.1.mrna1;Target=FBgn0004611.1 1267 1498 +
ChrX	stalkie_big_nohaplotig	exon	11693737	11693891	100	-	.	ID=FBgn0004611.1.mrna1.exon9;Name=FBgn0004611.1;Parent=FBgn0004611.1.mrna1;Target=FBgn0004611.1 1499 1653 +
ChrX	stalkie_big_nohaplotig	exon	11693450	11693663	99	-	.	ID=FBgn0004611.1.mrna1.exon10;Name=FBgn0004611.1;Parent=FBgn0004611.1.mrna1;Target=FBgn0004611.1 1654 1867 +
ChrX	stalkie_big_nohaplotig	exon	11693206	11693363	100	-	.	ID=FBgn0004611.1.mrna1.exon11;Name=FBgn0004611.1;Parent=FBgn0004611.1.mrna1;Target=FBgn0004611.1 1868 2025 +
ChrX	stalkie_big_nohaplotig	exon	11692957	11693127	100	-	.	ID=FBgn0004611.1.mrna1.exon12;Name=FBgn0004611.1;Parent=FBgn0004611.1.mrna1;Target=FBgn0004611.1 2026 2196 +
ChrX	stalkie_big_nohaplotig	exon	11692132	11692332	99	-	.	ID=FBgn0004611.1.mrna1.exon13;Name=FBgn0004611.1;Parent=FBgn0004611.1.mrna1;Target=FBgn0004611.1 2197 2397 +
ChrX	stalkie_big_nohaplotig	exon	11691731	11692061	100	-	.	ID=FBgn0004611.1.mrna1.exon14;Name=FBgn0004611.1;Parent=FBgn0004611.1.mrna1;Target=FBgn0004611.1 2398 2728 +
ChrX	stalkie_big_nohaplotig	exon	11690774	11691116	99	-	.	ID=FBgn0004611.1.mrna1.exon15;Name=FBgn0004611.1;Parent=FBgn0004611.1.mrna1;Target=FBgn0004611.1 2729 3072 +
ChrX	stalkie_big_nohaplotig	CDS	11704510	11704656	99	-	0	ID=FBgn0004611.1.mrna1.cds1;Name=FBgn0004611.1;Parent=FBgn0004611.1.mrna1;Target=FBgn0004611.1 99 246 +
ChrX	stalkie_big_nohaplotig	CDS	11698612	11698661	100	-	1	ID=FBgn0004611.1.mrna1.cds2;Name=FBgn0004611.1;Parent=FBgn0004611.1.mrna1;Target=FBgn0004611.1 247 296 +
Chr2	stalkie_big_nohaplotig	mRNA	146518616	146520838	.	-	.	ID=FBgn0023083.1.mrna1;Name=FBgn0023083.1;Parent=FBgn0023083.1.path1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=2218;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	146518616	146520838	99	-	.	ID=FBgn0023083.1.mrna1.exon1;Name=FBgn0023083.1;Parent=FBgn0023083.1.mrna1;Target=FBgn0023083.1 2223 1 .
Chr2	stalkie_big_nohaplotig	CDS	146518616	146520838	99	-	0	ID=FBgn0023083.1.mrna1.cds1;Name=FBgn0023083.1;Parent=FBgn0023083.1.mrna1;Target=FBgn0023083.1 2223 1 .
Chr1	stalkie_big_nohaplotig	mRNA	46885001	46891634	.	-	.	ID=FBgn0261722.1.mrna1;Name=FBgn0261722.1;Parent=FBgn0261722.1.path1;Dir=sensecoverage=97.9;identity=99.6;matches=468;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	46891605	46891634	100	-	.	ID=FBgn0261722.1.mrna1.exon1;Name=FBgn0261722.1;Parent=FBgn0261722.1.mrna1;Target=FBgn0261722.1 1 30 +
Chr1	stalkie_big_nohaplotig	exon	46891321	46891444	100	-	.	ID=FBgn0261722.1.mrna1.exon2;Name=FBgn0261722.1;Parent=FBgn0261722.1.mrna1;Target=FBgn0261722.1 31 154 +
Chr1	stalkie_big_nohaplotig	exon	46885175	46885382	99	-	.	ID=FBgn0261722.1.mrna1.exon3;Name=FBgn0261722.1;Parent=FBgn0261722.1.mrna1;Target=FBgn0261722.1 155 362 +
Chr1	stalkie_big_nohaplotig	exon	46885001	46885108	99	-	.	ID=FBgn0261722.1.mrna1.exon4;Name=FBgn0261722.1;Parent=FBgn0261722.1.mrna1;Target=FBgn0261722.1 363 470 +
Chr1	stalkie_big_nohaplotig	CDS	46891605	46891634	100	-	0	ID=FBgn0261722.1.mrna1.cds1;Name=FBgn0261722.1;Parent=FBgn0261722.1.mrna1;Target=FBgn0261722.1 1 30 +
Chr1	stalkie_big_nohaplotig	CDS	46891321	46891444	100	-	0	ID=FBgn0261722.1.mrna1.cds2;Name=FBgn0261722.1;Parent=FBgn0261722.1.mrna1;Target=FBgn0261722.1 31 154 +
Chr1	stalkie_big_nohaplotig	CDS	46885175	46885382	99	-	1	ID=FBgn0261722.1.mrna1.cds3;Name=FBgn0261722.1;Parent=FBgn0261722.1.mrna1;Target=FBgn0261722.1 155 362 +
Chr1	stalkie_big_nohaplotig	CDS	46885003	46885108	99	-	2	ID=FBgn0261722.1.mrna1.cds4;Name=FBgn0261722.1;Parent=FBgn0261722.1.mrna1;Target=FBgn0261722.1 363 468 +
Chr1	stalkie_big_nohaplotig	mRNA	46921479	46924253	.	+	.	ID=FBgn0036446.2.mrna1;Name=FBgn0036446.2;Parent=FBgn0036446.2.path1;Dir=sensecoverage=100.0;identity=99.3;matches=1827;mismatches=12;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	46921479	46922394	99	+	.	ID=FBgn0036446.2.mrna1.exon1;Name=FBgn0036446.2;Parent=FBgn0036446.2.mrna1;Target=FBgn0036446.2 1 916 +
Chr1	stalkie_big_nohaplotig	exon	46923331	46924253	99	+	.	ID=FBgn0036446.2.mrna1.exon2;Name=FBgn0036446.2;Parent=FBgn0036446.2.mrna1;Target=FBgn0036446.2 917 1839 +
Chr1	stalkie_big_nohaplotig	CDS	46921479	46922394	99	+	0	ID=FBgn0036446.2.mrna1.cds1;Name=FBgn0036446.2;Parent=FBgn0036446.2.mrna1;Target=FBgn0036446.2 1 916 +
Chr1	stalkie_big_nohaplotig	CDS	46923331	46924253	99	+	1	ID=FBgn0036446.2.mrna1.cds2;Name=FBgn0036446.2;Parent=FBgn0036446.2.mrna1;Target=FBgn0036446.2 917 1839 +
Chr1	stalkie_big_nohaplotig	mRNA	46710115	46721796	.	-	.	ID=FBgn0010105.1.mrna1;Name=FBgn0010105.1;Parent=FBgn0010105.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=1137;mismatches=6;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	46721244	46721796	99	-	.	ID=FBgn0010105.1.mrna1.exon1;Name=FBgn0010105.1;Parent=FBgn0010105.1.mrna1;Target=FBgn0010105.1 1 553 +
Chr1	stalkie_big_nohaplotig	exon	46710115	46710704	99	-	.	ID=FBgn0010105.1.mrna1.exon2;Name=FBgn0010105.1;Parent=FBgn0010105.1.mrna1;Target=FBgn0010105.1 554 1143 +
Chr1	stalkie_big_nohaplotig	CDS	46721244	46721796	99	-	0	ID=FBgn0010105.1.mrna1.cds1;Name=FBgn0010105.1;Parent=FBgn0010105.1.mrna1;Target=FBgn0010105.1 1 553 +
Chr1	stalkie_big_nohaplotig	CDS	46710115	46710704	99	-	1	ID=FBgn0010105.1.mrna1.cds2;Name=FBgn0010105.1;Parent=FBgn0010105.1.mrna1;Target=FBgn0010105.1 554 1143 +
Chr1	stalkie_big_nohaplotig	mRNA	174174236	174175828	.	-	.	ID=FBgn0263392.mrna1;Name=FBgn0263392;Parent=FBgn0263392.path1;Dir=sensecoverage=81.9;identity=99.9;matches=1517;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	174174452	174175828	99	-	.	ID=FBgn0263392.mrna1.exon1;Name=FBgn0263392;Parent=FBgn0263392.mrna1;Target=FBgn0263392 1 1377 +
Chr1	stalkie_big_nohaplotig	exon	174174236	174174377	99	-	.	ID=FBgn0263392.mrna1.exon2;Name=FBgn0263392;Parent=FBgn0263392.mrna1;Target=FBgn0263392 1378 1519 +
Chr1	stalkie_big_nohaplotig	CDS	174174452	174175828	99	-	0	ID=FBgn0263392.mrna1.cds1;Name=FBgn0263392;Parent=FBgn0263392.mrna1;Target=FBgn0263392 1 1377 +
Chr1	stalkie_big_nohaplotig	CDS	174174237	174174377	99	-	0	ID=FBgn0263392.mrna1.cds2;Name=FBgn0263392;Parent=FBgn0263392.mrna1;Target=FBgn0263392 1378 1518 +
ChrX	stalkie_big_nohaplotig	mRNA	62668228	62674785	.	-	.	ID=FBgn0003256.1.mrna1;Name=FBgn0003256.1;Parent=FBgn0003256.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1245;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	62674570	62674785	100	-	.	ID=FBgn0003256.1.mrna1.exon1;Name=FBgn0003256.1;Parent=FBgn0003256.1.mrna1;Target=FBgn0003256.1 1 216 +
ChrX	stalkie_big_nohaplotig	exon	62674445	62674503	100	-	.	ID=FBgn0003256.1.mrna1.exon2;Name=FBgn0003256.1;Parent=FBgn0003256.1.mrna1;Target=FBgn0003256.1 217 275 +
ChrX	stalkie_big_nohaplotig	exon	62672791	62672917	100	-	.	ID=FBgn0003256.1.mrna1.exon3;Name=FBgn0003256.1;Parent=FBgn0003256.1.mrna1;Target=FBgn0003256.1 276 402 +
ChrX	stalkie_big_nohaplotig	exon	62672619	62672729	100	-	.	ID=FBgn0003256.1.mrna1.exon4;Name=FBgn0003256.1;Parent=FBgn0003256.1.mrna1;Target=FBgn0003256.1 403 513 +
ChrX	stalkie_big_nohaplotig	exon	62672429	62672563	100	-	.	ID=FBgn0003256.1.mrna1.exon5;Name=FBgn0003256.1;Parent=FBgn0003256.1.mrna1;Target=FBgn0003256.1 514 648 +
ChrX	stalkie_big_nohaplotig	exon	62672075	62672359	100	-	.	ID=FBgn0003256.1.mrna1.exon6;Name=FBgn0003256.1;Parent=FBgn0003256.1.mrna1;Target=FBgn0003256.1 649 933 +
ChrX	stalkie_big_nohaplotig	exon	62671419	62671607	100	-	.	ID=FBgn0003256.1.mrna1.exon7;Name=FBgn0003256.1;Parent=FBgn0003256.1.mrna1;Target=FBgn0003256.1 934 1122 +
ChrX	stalkie_big_nohaplotig	exon	62668228	62668350	100	-	.	ID=FBgn0003256.1.mrna1.exon8;Name=FBgn0003256.1;Parent=FBgn0003256.1.mrna1;Target=FBgn0003256.1 1123 1245 +
ChrX	stalkie_big_nohaplotig	CDS	62674570	62674785	100	-	0	ID=FBgn0003256.1.mrna1.cds1;Name=FBgn0003256.1;Parent=FBgn0003256.1.mrna1;Target=FBgn0003256.1 1 216 +
ChrX	stalkie_big_nohaplotig	CDS	62674445	62674503	100	-	0	ID=FBgn0003256.1.mrna1.cds2;Name=FBgn0003256.1;Parent=FBgn0003256.1.mrna1;Target=FBgn0003256.1 217 275 +
ChrX	stalkie_big_nohaplotig	CDS	62672791	62672917	100	-	2	ID=FBgn0003256.1.mrna1.cds3;Name=FBgn0003256.1;Parent=FBgn0003256.1.mrna1;Target=FBgn0003256.1 276 402 +
ChrX	stalkie_big_nohaplotig	CDS	62672619	62672729	100	-	0	ID=FBgn0003256.1.mrna1.cds4;Name=FBgn0003256.1;Parent=FBgn0003256.1.mrna1;Target=FBgn0003256.1 403 513 +
ChrX	stalkie_big_nohaplotig	CDS	62672429	62672563	100	-	0	ID=FBgn0003256.1.mrna1.cds5;Name=FBgn0003256.1;Parent=FBgn0003256.1.mrna1;Target=FBgn0003256.1 514 648 +
ChrX	stalkie_big_nohaplotig	CDS	62672075	62672359	100	-	0	ID=FBgn0003256.1.mrna1.cds6;Name=FBgn0003256.1;Parent=FBgn0003256.1.mrna1;Target=FBgn0003256.1 649 933 +
ChrX	stalkie_big_nohaplotig	CDS	62671419	62671607	100	-	0	ID=FBgn0003256.1.mrna1.cds7;Name=FBgn0003256.1;Parent=FBgn0003256.1.mrna1;Target=FBgn0003256.1 934 1122 +
ChrX	stalkie_big_nohaplotig	CDS	62668228	62668350	100	-	0	ID=FBgn0003256.1.mrna1.cds8;Name=FBgn0003256.1;Parent=FBgn0003256.1.mrna1;Target=FBgn0003256.1 1123 1245 +
ChrX	stalkie_big_nohaplotig	mRNA	62683691	62705783	.	+	.	ID=FBgn0032210.1.mrna1;Name=FBgn0032210.1;Parent=FBgn0032210.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3093;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	62683691	62684212	100	+	.	ID=FBgn0032210.1.mrna1.exon1;Name=FBgn0032210.1;Parent=FBgn0032210.1.mrna1;Target=FBgn0032210.1 1 522 +
ChrX	stalkie_big_nohaplotig	exon	62688213	62689158	100	+	.	ID=FBgn0032210.1.mrna1.exon2;Name=FBgn0032210.1;Parent=FBgn0032210.1.mrna1;Target=FBgn0032210.1 523 1468 +
ChrX	stalkie_big_nohaplotig	exon	62692128	62692428	100	+	.	ID=FBgn0032210.1.mrna1.exon3;Name=FBgn0032210.1;Parent=FBgn0032210.1.mrna1;Target=FBgn0032210.1 1469 1769 +
ChrX	stalkie_big_nohaplotig	exon	62699566	62699750	100	+	.	ID=FBgn0032210.1.mrna1.exon4;Name=FBgn0032210.1;Parent=FBgn0032210.1.mrna1;Target=FBgn0032210.1 1770 1954 +
ChrX	stalkie_big_nohaplotig	exon	62699814	62699968	100	+	.	ID=FBgn0032210.1.mrna1.exon5;Name=FBgn0032210.1;Parent=FBgn0032210.1.mrna1;Target=FBgn0032210.1 1955 2109 +
ChrX	stalkie_big_nohaplotig	exon	62700121	62700339	100	+	.	ID=FBgn0032210.1.mrna1.exon6;Name=FBgn0032210.1;Parent=FBgn0032210.1.mrna1;Target=FBgn0032210.1 2110 2328 +
ChrX	stalkie_big_nohaplotig	exon	62703833	62704067	100	+	.	ID=FBgn0032210.1.mrna1.exon7;Name=FBgn0032210.1;Parent=FBgn0032210.1.mrna1;Target=FBgn0032210.1 2329 2563 +
ChrX	stalkie_big_nohaplotig	exon	62704128	62704263	100	+	.	ID=FBgn0032210.1.mrna1.exon8;Name=FBgn0032210.1;Parent=FBgn0032210.1.mrna1;Target=FBgn0032210.1 2564 2699 +
ChrX	stalkie_big_nohaplotig	exon	62705333	62705538	100	+	.	ID=FBgn0032210.1.mrna1.exon9;Name=FBgn0032210.1;Parent=FBgn0032210.1.mrna1;Target=FBgn0032210.1 2700 2905 +
ChrX	stalkie_big_nohaplotig	exon	62705596	62705783	100	+	.	ID=FBgn0032210.1.mrna1.exon10;Name=FBgn0032210.1;Parent=FBgn0032210.1.mrna1;Target=FBgn0032210.1 2906 3093 +
ChrX	stalkie_big_nohaplotig	CDS	62683691	62684212	100	+	0	ID=FBgn0032210.1.mrna1.cds1;Name=FBgn0032210.1;Parent=FBgn0032210.1.mrna1;Target=FBgn0032210.1 1 522 +
ChrX	stalkie_big_nohaplotig	CDS	62688213	62689158	100	+	0	ID=FBgn0032210.1.mrna1.cds2;Name=FBgn0032210.1;Parent=FBgn0032210.1.mrna1;Target=FBgn0032210.1 523 1468 +
ChrX	stalkie_big_nohaplotig	CDS	62692128	62692428	100	+	1	ID=FBgn0032210.1.mrna1.cds3;Name=FBgn0032210.1;Parent=FBgn0032210.1.mrna1;Target=FBgn0032210.1 1469 1769 +
ChrX	stalkie_big_nohaplotig	CDS	62699566	62699750	100	+	2	ID=FBgn0032210.1.mrna1.cds4;Name=FBgn0032210.1;Parent=FBgn0032210.1.mrna1;Target=FBgn0032210.1 1770 1954 +
ChrX	stalkie_big_nohaplotig	CDS	62699814	62699968	100	+	1	ID=FBgn0032210.1.mrna1.cds5;Name=FBgn0032210.1;Parent=FBgn0032210.1.mrna1;Target=FBgn0032210.1 1955 2109 +
ChrX	stalkie_big_nohaplotig	CDS	62700121	62700339	100	+	0	ID=FBgn0032210.1.mrna1.cds6;Name=FBgn0032210.1;Parent=FBgn0032210.1.mrna1;Target=FBgn0032210.1 2110 2328 +
ChrX	stalkie_big_nohaplotig	CDS	62703833	62704067	100	+	0	ID=FBgn0032210.1.mrna1.cds7;Name=FBgn0032210.1;Parent=FBgn0032210.1.mrna1;Target=FBgn0032210.1 2329 2563 +
ChrX	stalkie_big_nohaplotig	CDS	62704128	62704263	100	+	1	ID=FBgn0032210.1.mrna1.cds8;Name=FBgn0032210.1;Parent=FBgn0032210.1.mrna1;Target=FBgn0032210.1 2564 2699 +
ChrX	stalkie_big_nohaplotig	CDS	62705333	62705538	100	+	2	ID=FBgn0032210.1.mrna1.cds9;Name=FBgn0032210.1;Parent=FBgn0032210.1.mrna1;Target=FBgn0032210.1 2700 2905 +
ChrX	stalkie_big_nohaplotig	CDS	62705596	62705783	100	+	1	ID=FBgn0032210.1.mrna1.cds10;Name=FBgn0032210.1;Parent=FBgn0032210.1.mrna1;Target=FBgn0032210.1 2906 3093 +
ChrX	stalkie_big_nohaplotig	mRNA	62828535	62830904	.	-	.	ID=ORF219.mrna1;Name=ORF219;Parent=ORF219.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2370;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	62828535	62830904	100	-	.	ID=ORF219.mrna1.exon1;Name=ORF219;Parent=ORF219.mrna1;Target=ORF219 2370 1 .
ChrX	stalkie_big_nohaplotig	CDS	62828535	62830904	100	-	0	ID=ORF219.mrna1.cds1;Name=ORF219;Parent=ORF219.mrna1;Target=ORF219 2370 1 .
Chr2	stalkie_big_nohaplotig	mRNA	23375786	23377543	.	+	.	ID=ORF476.mrna1;Name=ORF476;Parent=ORF476.path1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1754;mismatches=4;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	23375786	23377543	99	+	.	ID=ORF476.mrna1.exon1;Name=ORF476;Parent=ORF476.mrna1;Target=ORF476 1758 1 .
Chr2	stalkie_big_nohaplotig	CDS	23375786	23377543	99	+	0	ID=ORF476.mrna1.cds1;Name=ORF476;Parent=ORF476.mrna1;Target=ORF476 1758 1 .
Chr2	stalkie_big_nohaplotig	mRNA	23282418	23284040	.	-	.	ID=ORF602.mrna1;Name=ORF602;Parent=ORF602.path1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1617;mismatches=6;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	23282418	23284040	99	-	.	ID=ORF602.mrna1.exon1;Name=ORF602;Parent=ORF602.mrna1;Target=ORF602 1623 1 .
Chr2	stalkie_big_nohaplotig	CDS	23282418	23284040	99	-	0	ID=ORF602.mrna1.cds1;Name=ORF602;Parent=ORF602.mrna1;Target=ORF602 1623 1 .
Chr2	stalkie_big_nohaplotig	mRNA	23562106	23587192	.	+	.	ID=FBgn0020269.1.mrna1;Name=FBgn0020269.1;Parent=FBgn0020269.1.path1;Dir=sensecoverage=99.3;identity=99.6;matches=1065;mismatches=4;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	23562106	23562327	98	+	.	ID=FBgn0020269.1.mrna1.exon1;Name=FBgn0020269.1;Parent=FBgn0020269.1.mrna1;Target=FBgn0020269.1 1 222 +
Chr2	stalkie_big_nohaplotig	exon	23567187	23567408	100	+	.	ID=FBgn0020269.1.mrna1.exon2;Name=FBgn0020269.1;Parent=FBgn0020269.1.mrna1;Target=FBgn0020269.1 223 444 +
Chr2	stalkie_big_nohaplotig	exon	23577603	23577832	100	+	.	ID=FBgn0020269.1.mrna1.exon3;Name=FBgn0020269.1;Parent=FBgn0020269.1.mrna1;Target=FBgn0020269.1 445 674 +
Chr2	stalkie_big_nohaplotig	exon	23586798	23587192	99	+	.	ID=FBgn0020269.1.mrna1.exon4;Name=FBgn0020269.1;Parent=FBgn0020269.1.mrna1;Target=FBgn0020269.1 675 1069 +
Chr2	stalkie_big_nohaplotig	CDS	23562106	23562327	98	+	0	ID=FBgn0020269.1.mrna1.cds1;Name=FBgn0020269.1;Parent=FBgn0020269.1.mrna1;Target=FBgn0020269.1 1 222 +
Chr2	stalkie_big_nohaplotig	CDS	23567187	23567408	100	+	0	ID=FBgn0020269.1.mrna1.cds2;Name=FBgn0020269.1;Parent=FBgn0020269.1.mrna1;Target=FBgn0020269.1 223 444 +
Chr2	stalkie_big_nohaplotig	CDS	23577603	23577832	100	+	0	ID=FBgn0020269.1.mrna1.cds3;Name=FBgn0020269.1;Parent=FBgn0020269.1.mrna1;Target=FBgn0020269.1 445 674 +
Chr2	stalkie_big_nohaplotig	CDS	23586798	23587191	99	+	2	ID=FBgn0020269.1.mrna1.cds4;Name=FBgn0020269.1;Parent=FBgn0020269.1.mrna1;Target=FBgn0020269.1 675 1068 +
Chr2	stalkie_big_nohaplotig	mRNA	23191658	23192793	.	+	.	ID=FBgn0028382.1.mrna1;Name=FBgn0028382.1;Parent=FBgn0028382.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=936;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	23191658	23191888	100	+	.	ID=FBgn0028382.1.mrna1.exon1;Name=FBgn0028382.1;Parent=FBgn0028382.1.mrna1;Target=FBgn0028382.1 1 231 +
Chr2	stalkie_big_nohaplotig	exon	23191948	23192337	100	+	.	ID=FBgn0028382.1.mrna1.exon2;Name=FBgn0028382.1;Parent=FBgn0028382.1.mrna1;Target=FBgn0028382.1 232 621 +
Chr2	stalkie_big_nohaplotig	exon	23192411	23192583	100	+	.	ID=FBgn0028382.1.mrna1.exon3;Name=FBgn0028382.1;Parent=FBgn0028382.1.mrna1;Target=FBgn0028382.1 622 794 +
Chr2	stalkie_big_nohaplotig	exon	23192652	23192793	100	+	.	ID=FBgn0028382.1.mrna1.exon4;Name=FBgn0028382.1;Parent=FBgn0028382.1.mrna1;Target=FBgn0028382.1 795 936 +
Chr2	stalkie_big_nohaplotig	CDS	23191658	23191888	100	+	0	ID=FBgn0028382.1.mrna1.cds1;Name=FBgn0028382.1;Parent=FBgn0028382.1.mrna1;Target=FBgn0028382.1 1 231 +
Chr2	stalkie_big_nohaplotig	CDS	23191948	23192337	100	+	0	ID=FBgn0028382.1.mrna1.cds2;Name=FBgn0028382.1;Parent=FBgn0028382.1.mrna1;Target=FBgn0028382.1 232 621 +
Chr2	stalkie_big_nohaplotig	CDS	23192411	23192583	100	+	0	ID=FBgn0028382.1.mrna1.cds3;Name=FBgn0028382.1;Parent=FBgn0028382.1.mrna1;Target=FBgn0028382.1 622 794 +
Chr2	stalkie_big_nohaplotig	CDS	23192652	23192793	100	+	2	ID=FBgn0028382.1.mrna1.cds4;Name=FBgn0028382.1;Parent=FBgn0028382.1.mrna1;Target=FBgn0028382.1 795 936 +
Chr2	stalkie_big_nohaplotig	mRNA	23279248	23285618	.	+	.	ID=FBgn0033960.1.mrna1;Name=FBgn0033960.1;Parent=FBgn0033960.1.path1;Dir=sensecoverage=63.5;identity=99.9;matches=1037;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	23279248	23279795	99	+	.	ID=FBgn0033960.1.mrna1.exon1;Name=FBgn0033960.1;Parent=FBgn0033960.1.mrna1;Target=FBgn0033960.1 24 571 +
Chr2	stalkie_big_nohaplotig	exon	23285129	23285618	100	+	.	ID=FBgn0033960.1.mrna1.exon2;Name=FBgn0033960.1;Parent=FBgn0033960.1.mrna1;Target=FBgn0033960.1 572 1061 +
Chr2	stalkie_big_nohaplotig	CDS	23279249	23279795	99	+	0	ID=FBgn0033960.1.mrna1.cds1;Name=FBgn0033960.1;Parent=FBgn0033960.1.mrna1;Target=FBgn0033960.1 25 571 +
Chr2	stalkie_big_nohaplotig	CDS	23285129	23285616	100	+	1	ID=FBgn0033960.1.mrna1.cds2;Name=FBgn0033960.1;Parent=FBgn0033960.1.mrna1;Target=FBgn0033960.1 572 1059 +
Chr1	stalkie_big_nohaplotig	mRNA	165842054	165845679	.	-	.	ID=FBgn0010240.1.mrna1;Name=FBgn0010240.1;Parent=FBgn0010240.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1531;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	165845561	165845679	100	-	.	ID=FBgn0010240.1.mrna1.exon1;Name=FBgn0010240.1;Parent=FBgn0010240.1.mrna1;Target=FBgn0010240.1 1 119 +
Chr1	stalkie_big_nohaplotig	exon	165844474	165844577	100	-	.	ID=FBgn0010240.1.mrna1.exon2;Name=FBgn0010240.1;Parent=FBgn0010240.1.mrna1;Target=FBgn0010240.1 120 223 +
Chr1	stalkie_big_nohaplotig	exon	165844306	165844373	100	-	.	ID=FBgn0010240.1.mrna1.exon3;Name=FBgn0010240.1;Parent=FBgn0010240.1.mrna1;Target=FBgn0010240.1 224 291 +
Chr1	stalkie_big_nohaplotig	exon	165843548	165843732	100	-	.	ID=FBgn0010240.1.mrna1.exon4;Name=FBgn0010240.1;Parent=FBgn0010240.1.mrna1;Target=FBgn0010240.1 292 476 +
Chr1	stalkie_big_nohaplotig	exon	165843326	165843483	100	-	.	ID=FBgn0010240.1.mrna1.exon5;Name=FBgn0010240.1;Parent=FBgn0010240.1.mrna1;Target=FBgn0010240.1 477 634 +
Chr1	stalkie_big_nohaplotig	exon	165842975	165843259	99	-	.	ID=FBgn0010240.1.mrna1.exon6;Name=FBgn0010240.1;Parent=FBgn0010240.1.mrna1;Target=FBgn0010240.1 635 919 +
Chr1	stalkie_big_nohaplotig	exon	165842700	165842918	100	-	.	ID=FBgn0010240.1.mrna1.exon7;Name=FBgn0010240.1;Parent=FBgn0010240.1.mrna1;Target=FBgn0010240.1 920 1138 +
Chr1	stalkie_big_nohaplotig	exon	165842280	165842501	99	-	.	ID=FBgn0010240.1.mrna1.exon8;Name=FBgn0010240.1;Parent=FBgn0010240.1.mrna1;Target=FBgn0010240.1 1139 1360 +
Chr1	stalkie_big_nohaplotig	exon	165842054	165842226	100	-	.	ID=FBgn0010240.1.mrna1.exon9;Name=FBgn0010240.1;Parent=FBgn0010240.1.mrna1;Target=FBgn0010240.1 1361 1533 +
Chr1	stalkie_big_nohaplotig	CDS	165845561	165845679	100	-	0	ID=FBgn0010240.1.mrna1.cds1;Name=FBgn0010240.1;Parent=FBgn0010240.1.mrna1;Target=FBgn0010240.1 1 119 +
Chr1	stalkie_big_nohaplotig	CDS	165844474	165844577	100	-	2	ID=FBgn0010240.1.mrna1.cds2;Name=FBgn0010240.1;Parent=FBgn0010240.1.mrna1;Target=FBgn0010240.1 120 223 +
Chr1	stalkie_big_nohaplotig	CDS	165844306	165844373	100	-	1	ID=FBgn0010240.1.mrna1.cds3;Name=FBgn0010240.1;Parent=FBgn0010240.1.mrna1;Target=FBgn0010240.1 224 291 +
Chr1	stalkie_big_nohaplotig	CDS	165843548	165843732	100	-	0	ID=FBgn0010240.1.mrna1.cds4;Name=FBgn0010240.1;Parent=FBgn0010240.1.mrna1;Target=FBgn0010240.1 292 476 +
Chr1	stalkie_big_nohaplotig	CDS	165843326	165843483	100	-	2	ID=FBgn0010240.1.mrna1.cds5;Name=FBgn0010240.1;Parent=FBgn0010240.1.mrna1;Target=FBgn0010240.1 477 634 +
Chr1	stalkie_big_nohaplotig	CDS	165842975	165843259	99	-	1	ID=FBgn0010240.1.mrna1.cds6;Name=FBgn0010240.1;Parent=FBgn0010240.1.mrna1;Target=FBgn0010240.1 635 919 +
Chr1	stalkie_big_nohaplotig	CDS	165842700	165842918	100	-	1	ID=FBgn0010240.1.mrna1.cds7;Name=FBgn0010240.1;Parent=FBgn0010240.1.mrna1;Target=FBgn0010240.1 920 1138 +
Chr1	stalkie_big_nohaplotig	CDS	165842280	165842501	99	-	1	ID=FBgn0010240.1.mrna1.cds8;Name=FBgn0010240.1;Parent=FBgn0010240.1.mrna1;Target=FBgn0010240.1 1139 1360 +
Chr1	stalkie_big_nohaplotig	CDS	165842054	165842226	100	-	1	ID=FBgn0010240.1.mrna1.cds9;Name=FBgn0010240.1;Parent=FBgn0010240.1.mrna1;Target=FBgn0010240.1 1361 1533 +
Chr1	stalkie_big_nohaplotig	mRNA	165882593	165924676	.	-	.	ID=FBgn0259110.1.mrna2;Name=FBgn0259110.1;Parent=FBgn0259110.1.path2;Dir=sensecoverage=85.8;identity=99.9;matches=3816;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	165924530	165924676	100	-	.	ID=FBgn0259110.1.mrna2.exon1;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 631 777 +
Chr1	stalkie_big_nohaplotig	exon	165916007	165916297	100	-	.	ID=FBgn0259110.1.mrna2.exon2;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 778 1068 +
Chr1	stalkie_big_nohaplotig	exon	165911254	165911423	100	-	.	ID=FBgn0259110.1.mrna2.exon3;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 1069 1238 +
Chr1	stalkie_big_nohaplotig	exon	165905415	165905584	100	-	.	ID=FBgn0259110.1.mrna2.exon4;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 1239 1408 +
Chr1	stalkie_big_nohaplotig	exon	165904456	165904619	100	-	.	ID=FBgn0259110.1.mrna2.exon5;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 1409 1572 +
Chr1	stalkie_big_nohaplotig	exon	165901954	165902118	100	-	.	ID=FBgn0259110.1.mrna2.exon6;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 1573 1737 +
Chr1	stalkie_big_nohaplotig	exon	165901589	165901733	100	-	.	ID=FBgn0259110.1.mrna2.exon7;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 1738 1882 +
Chr1	stalkie_big_nohaplotig	exon	165901017	165901188	100	-	.	ID=FBgn0259110.1.mrna2.exon8;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 1883 2054 +
Chr1	stalkie_big_nohaplotig	exon	165900751	165900870	99	-	.	ID=FBgn0259110.1.mrna2.exon9;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 2055 2174 +
Chr1	stalkie_big_nohaplotig	exon	165900123	165900300	100	-	.	ID=FBgn0259110.1.mrna2.exon10;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 2175 2352 +
Chr1	stalkie_big_nohaplotig	exon	165898416	165898566	100	-	.	ID=FBgn0259110.1.mrna2.exon11;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 2353 2503 +
Chr1	stalkie_big_nohaplotig	exon	165894112	165894250	99	-	.	ID=FBgn0259110.1.mrna2.exon12;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 2504 2642 +
Chr1	stalkie_big_nohaplotig	exon	165888499	165888657	99	-	.	ID=FBgn0259110.1.mrna2.exon13;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 2643 2801 +
Chr1	stalkie_big_nohaplotig	exon	165888210	165888274	100	-	.	ID=FBgn0259110.1.mrna2.exon14;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 2802 2866 +
Chr1	stalkie_big_nohaplotig	exon	165886330	165887047	100	-	.	ID=FBgn0259110.1.mrna2.exon15;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 2867 3584 +
Chr1	stalkie_big_nohaplotig	exon	165885449	165885790	100	-	.	ID=FBgn0259110.1.mrna2.exon16;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 3585 3926 +
Chr1	stalkie_big_nohaplotig	exon	165882593	165883115	100	-	.	ID=FBgn0259110.1.mrna2.exon17;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 3927 4449 +
Chr1	stalkie_big_nohaplotig	CDS	165924530	165924676	100	-	0	ID=FBgn0259110.1.mrna2.cds1;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 631 777 +
Chr1	stalkie_big_nohaplotig	CDS	165916007	165916297	100	-	0	ID=FBgn0259110.1.mrna2.cds2;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 778 1068 +
Chr1	stalkie_big_nohaplotig	CDS	165911254	165911423	100	-	0	ID=FBgn0259110.1.mrna2.cds3;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 1069 1238 +
Chr1	stalkie_big_nohaplotig	CDS	165905415	165905584	100	-	2	ID=FBgn0259110.1.mrna2.cds4;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 1239 1408 +
Chr1	stalkie_big_nohaplotig	CDS	165904456	165904619	100	-	1	ID=FBgn0259110.1.mrna2.cds5;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 1409 1572 +
Chr1	stalkie_big_nohaplotig	CDS	165901954	165902118	100	-	0	ID=FBgn0259110.1.mrna2.cds6;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 1573 1737 +
Chr1	stalkie_big_nohaplotig	CDS	165901589	165901733	100	-	0	ID=FBgn0259110.1.mrna2.cds7;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 1738 1882 +
Chr1	stalkie_big_nohaplotig	CDS	165901017	165901188	100	-	1	ID=FBgn0259110.1.mrna2.cds8;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 1883 2054 +
Chr1	stalkie_big_nohaplotig	CDS	165900751	165900870	99	-	2	ID=FBgn0259110.1.mrna2.cds9;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 2055 2174 +
Chr1	stalkie_big_nohaplotig	CDS	165900123	165900300	100	-	2	ID=FBgn0259110.1.mrna2.cds10;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 2175 2352 +
Chr1	stalkie_big_nohaplotig	CDS	165898416	165898566	100	-	0	ID=FBgn0259110.1.mrna2.cds11;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 2353 2503 +
Chr1	stalkie_big_nohaplotig	CDS	165894112	165894250	99	-	1	ID=FBgn0259110.1.mrna2.cds12;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 2504 2642 +
Chr1	stalkie_big_nohaplotig	CDS	165888499	165888657	99	-	2	ID=FBgn0259110.1.mrna2.cds13;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 2643 2801 +
Chr1	stalkie_big_nohaplotig	CDS	165888210	165888274	100	-	2	ID=FBgn0259110.1.mrna2.cds14;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 2802 2866 +
Chr1	stalkie_big_nohaplotig	CDS	165886330	165887047	100	-	1	ID=FBgn0259110.1.mrna2.cds15;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 2867 3584 +
Chr1	stalkie_big_nohaplotig	CDS	165885449	165885790	100	-	2	ID=FBgn0259110.1.mrna2.cds16;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 3585 3926 +
Chr1	stalkie_big_nohaplotig	CDS	165882593	165883115	100	-	2	ID=FBgn0259110.1.mrna2.cds17;Name=FBgn0259110.1;Parent=FBgn0259110.1.mrna2;Target=FBgn0259110.1 3927 4449 +
Chr1	stalkie_big_nohaplotig	mRNA	165655175	165659346	.	+	.	ID=FBgn0031208.1.mrna1;Name=FBgn0031208.1;Parent=FBgn0031208.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=2877;mismatches=9;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	165655175	165655254	98	+	.	ID=FBgn0031208.1.mrna1.exon1;Name=FBgn0031208.1;Parent=FBgn0031208.1.mrna1;Target=FBgn0031208.1 1 80 +
Chr1	stalkie_big_nohaplotig	exon	165655464	165655899	99	+	.	ID=FBgn0031208.1.mrna1.exon2;Name=FBgn0031208.1;Parent=FBgn0031208.1.mrna1;Target=FBgn0031208.1 81 516 +
Chr1	stalkie_big_nohaplotig	exon	165655976	165656331	99	+	.	ID=FBgn0031208.1.mrna1.exon3;Name=FBgn0031208.1;Parent=FBgn0031208.1.mrna1;Target=FBgn0031208.1 517 872 +
Chr1	stalkie_big_nohaplotig	exon	165656985	165657088	98	+	.	ID=FBgn0031208.1.mrna1.exon4;Name=FBgn0031208.1;Parent=FBgn0031208.1.mrna1;Target=FBgn0031208.1 873 976 +
Chr1	stalkie_big_nohaplotig	exon	165657157	165657267	99	+	.	ID=FBgn0031208.1.mrna1.exon5;Name=FBgn0031208.1;Parent=FBgn0031208.1.mrna1;Target=FBgn0031208.1 977 1087 +
Chr1	stalkie_big_nohaplotig	exon	165657326	165657697	99	+	.	ID=FBgn0031208.1.mrna1.exon6;Name=FBgn0031208.1;Parent=FBgn0031208.1.mrna1;Target=FBgn0031208.1 1088 1459 +
Chr1	stalkie_big_nohaplotig	exon	165657752	165658217	100	+	.	ID=FBgn0031208.1.mrna1.exon7;Name=FBgn0031208.1;Parent=FBgn0031208.1.mrna1;Target=FBgn0031208.1 1460 1925 +
Chr1	stalkie_big_nohaplotig	exon	165658273	165658416	100	+	.	ID=FBgn0031208.1.mrna1.exon8;Name=FBgn0031208.1;Parent=FBgn0031208.1.mrna1;Target=FBgn0031208.1 1926 2069 +
Chr1	stalkie_big_nohaplotig	exon	165658477	165658675	99	+	.	ID=FBgn0031208.1.mrna1.exon9;Name=FBgn0031208.1;Parent=FBgn0031208.1.mrna1;Target=FBgn0031208.1 2070 2268 +
Chr1	stalkie_big_nohaplotig	exon	165658729	165659346	100	+	.	ID=FBgn0031208.1.mrna1.exon10;Name=FBgn0031208.1;Parent=FBgn0031208.1.mrna1;Target=FBgn0031208.1 2269 2886 +
Chr1	stalkie_big_nohaplotig	CDS	165655175	165655254	98	+	0	ID=FBgn0031208.1.mrna1.cds1;Name=FBgn0031208.1;Parent=FBgn0031208.1.mrna1;Target=FBgn0031208.1 1 80 +
Chr1	stalkie_big_nohaplotig	CDS	165655464	165655899	99	+	2	ID=FBgn0031208.1.mrna1.cds2;Name=FBgn0031208.1;Parent=FBgn0031208.1.mrna1;Target=FBgn0031208.1 81 516 +
Chr1	stalkie_big_nohaplotig	CDS	165655976	165656331	99	+	0	ID=FBgn0031208.1.mrna1.cds3;Name=FBgn0031208.1;Parent=FBgn0031208.1.mrna1;Target=FBgn0031208.1 517 872 +
Chr1	stalkie_big_nohaplotig	CDS	165656985	165657088	98	+	2	ID=FBgn0031208.1.mrna1.cds4;Name=FBgn0031208.1;Parent=FBgn0031208.1.mrna1;Target=FBgn0031208.1 873 976 +
Chr1	stalkie_big_nohaplotig	CDS	165657157	165657267	99	+	1	ID=FBgn0031208.1.mrna1.cds5;Name=FBgn0031208.1;Parent=FBgn0031208.1.mrna1;Target=FBgn0031208.1 977 1087 +
Chr1	stalkie_big_nohaplotig	CDS	165657326	165657697	99	+	1	ID=FBgn0031208.1.mrna1.cds6;Name=FBgn0031208.1;Parent=FBgn0031208.1.mrna1;Target=FBgn0031208.1 1088 1459 +
Chr1	stalkie_big_nohaplotig	CDS	165657752	165658217	100	+	1	ID=FBgn0031208.1.mrna1.cds7;Name=FBgn0031208.1;Parent=FBgn0031208.1.mrna1;Target=FBgn0031208.1 1460 1925 +
Chr1	stalkie_big_nohaplotig	CDS	165658273	165658416	100	+	2	ID=FBgn0031208.1.mrna1.cds8;Name=FBgn0031208.1;Parent=FBgn0031208.1.mrna1;Target=FBgn0031208.1 1926 2069 +
Chr1	stalkie_big_nohaplotig	CDS	165658477	165658675	99	+	2	ID=FBgn0031208.1.mrna1.cds9;Name=FBgn0031208.1;Parent=FBgn0031208.1.mrna1;Target=FBgn0031208.1 2070 2268 +
Chr1	stalkie_big_nohaplotig	CDS	165658729	165659346	100	+	0	ID=FBgn0031208.1.mrna1.cds10;Name=FBgn0031208.1;Parent=FBgn0031208.1.mrna1;Target=FBgn0031208.1 2269 2886 +
Chr2	stalkie_big_nohaplotig	mRNA	7135911	7144465	.	+	.	ID=FBgn0050122.1.mrna1;Name=FBgn0050122.1;Parent=FBgn0050122.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=3536;mismatches=4;indels=3;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	7135911	7136082	100	+	.	ID=FBgn0050122.1.mrna1.exon1;Name=FBgn0050122.1;Parent=FBgn0050122.1.mrna1;Target=FBgn0050122.1 1 172 +
Chr2	stalkie_big_nohaplotig	exon	7136424	7137167	100	+	.	ID=FBgn0050122.1.mrna1.exon2;Name=FBgn0050122.1;Parent=FBgn0050122.1.mrna1;Target=FBgn0050122.1 173 916 +
Chr2	stalkie_big_nohaplotig	exon	7137234	7138019	100	+	.	ID=FBgn0050122.1.mrna1.exon3;Name=FBgn0050122.1;Parent=FBgn0050122.1.mrna1;Target=FBgn0050122.1 917 1702 +
Chr2	stalkie_big_nohaplotig	exon	7138081	7138541	99	+	.	ID=FBgn0050122.1.mrna1.exon4;Name=FBgn0050122.1;Parent=FBgn0050122.1.mrna1;Target=FBgn0050122.1 1703 2163 +
Chr2	stalkie_big_nohaplotig	exon	7139273	7139401	100	+	.	ID=FBgn0050122.1.mrna1.exon5;Name=FBgn0050122.1;Parent=FBgn0050122.1.mrna1;Target=FBgn0050122.1 2164 2292 +
Chr2	stalkie_big_nohaplotig	exon	7140350	7140521	100	+	.	ID=FBgn0050122.1.mrna1.exon6;Name=FBgn0050122.1;Parent=FBgn0050122.1.mrna1;Target=FBgn0050122.1 2293 2464 +
Chr2	stalkie_big_nohaplotig	exon	7142449	7143161	99	+	.	ID=FBgn0050122.1.mrna1.exon7;Name=FBgn0050122.1;Parent=FBgn0050122.1.mrna1;Target=FBgn0050122.1 2465 3177 +
Chr2	stalkie_big_nohaplotig	exon	7143229	7143385	98	+	.	ID=FBgn0050122.1.mrna1.exon8;Name=FBgn0050122.1;Parent=FBgn0050122.1.mrna1;Target=FBgn0050122.1 3178 3331 +
Chr2	stalkie_big_nohaplotig	exon	7143455	7143528	100	+	.	ID=FBgn0050122.1.mrna1.exon9;Name=FBgn0050122.1;Parent=FBgn0050122.1.mrna1;Target=FBgn0050122.1 3332 3405 +
Chr2	stalkie_big_nohaplotig	exon	7144331	7144465	100	+	.	ID=FBgn0050122.1.mrna1.exon10;Name=FBgn0050122.1;Parent=FBgn0050122.1.mrna1;Target=FBgn0050122.1 3406 3540 +
Chr2	stalkie_big_nohaplotig	CDS	7135911	7136082	100	+	0	ID=FBgn0050122.1.mrna1.cds1;Name=FBgn0050122.1;Parent=FBgn0050122.1.mrna1;Target=FBgn0050122.1 1 172 +
Chr2	stalkie_big_nohaplotig	CDS	7136424	7137167	100	+	1	ID=FBgn0050122.1.mrna1.cds2;Name=FBgn0050122.1;Parent=FBgn0050122.1.mrna1;Target=FBgn0050122.1 173 916 +
Chr2	stalkie_big_nohaplotig	CDS	7137234	7138019	100	+	1	ID=FBgn0050122.1.mrna1.cds3;Name=FBgn0050122.1;Parent=FBgn0050122.1.mrna1;Target=FBgn0050122.1 917 1702 +
Chr2	stalkie_big_nohaplotig	CDS	7138081	7138541	99	+	1	ID=FBgn0050122.1.mrna1.cds4;Name=FBgn0050122.1;Parent=FBgn0050122.1.mrna1;Target=FBgn0050122.1 1703 2163 +
Chr2	stalkie_big_nohaplotig	CDS	7139273	7139401	100	+	0	ID=FBgn0050122.1.mrna1.cds5;Name=FBgn0050122.1;Parent=FBgn0050122.1.mrna1;Target=FBgn0050122.1 2164 2292 +
Chr2	stalkie_big_nohaplotig	CDS	7140350	7140521	100	+	0	ID=FBgn0050122.1.mrna1.cds6;Name=FBgn0050122.1;Parent=FBgn0050122.1.mrna1;Target=FBgn0050122.1 2293 2464 +
Chr2	stalkie_big_nohaplotig	CDS	7142449	7143161	99	+	1	ID=FBgn0050122.1.mrna1.cds7;Name=FBgn0050122.1;Parent=FBgn0050122.1.mrna1;Target=FBgn0050122.1 2465 3177 +
Chr2	stalkie_big_nohaplotig	CDS	7143229	7143385	98	+	0	ID=FBgn0050122.1.mrna1.cds8;Name=FBgn0050122.1;Parent=FBgn0050122.1.mrna1;Target=FBgn0050122.1 3178 3331 +
Chr2	stalkie_big_nohaplotig	CDS	7143455	7143528	100	+	1	ID=FBgn0050122.1.mrna1.cds9;Name=FBgn0050122.1;Parent=FBgn0050122.1.mrna1;Target=FBgn0050122.1 3332 3405 +
Chr2	stalkie_big_nohaplotig	CDS	7144331	7144465	100	+	0	ID=FBgn0050122.1.mrna1.cds10;Name=FBgn0050122.1;Parent=FBgn0050122.1.mrna1;Target=FBgn0050122.1 3406 3540 +
Chr1	stalkie_big_nohaplotig	mRNA	55466290	55476040	.	-	.	ID=FBgn0036144.1.mrna1;Name=FBgn0036144.1;Parent=FBgn0036144.1.path1;Dir=sensecoverage=99.9;identity=99.8;matches=810;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	55475900	55476040	100	-	.	ID=FBgn0036144.1.mrna1.exon1;Name=FBgn0036144.1;Parent=FBgn0036144.1.mrna1;Target=FBgn0036144.1 1 141 +
Chr1	stalkie_big_nohaplotig	exon	55469312	55469501	100	-	.	ID=FBgn0036144.1.mrna1.exon2;Name=FBgn0036144.1;Parent=FBgn0036144.1.mrna1;Target=FBgn0036144.1 142 331 +
Chr1	stalkie_big_nohaplotig	exon	55466752	55466909	99	-	.	ID=FBgn0036144.1.mrna1.exon3;Name=FBgn0036144.1;Parent=FBgn0036144.1.mrna1;Target=FBgn0036144.1 332 489 +
Chr1	stalkie_big_nohaplotig	exon	55466403	55466693	100	-	.	ID=FBgn0036144.1.mrna1.exon4;Name=FBgn0036144.1;Parent=FBgn0036144.1.mrna1;Target=FBgn0036144.1 490 780 +
Chr1	stalkie_big_nohaplotig	exon	55466290	55466321	96	-	.	ID=FBgn0036144.1.mrna1.exon5;Name=FBgn0036144.1;Parent=FBgn0036144.1.mrna1;Target=FBgn0036144.1 781 812 +
Chr1	stalkie_big_nohaplotig	CDS	55475900	55476040	100	-	0	ID=FBgn0036144.1.mrna1.cds1;Name=FBgn0036144.1;Parent=FBgn0036144.1.mrna1;Target=FBgn0036144.1 1 141 +
Chr1	stalkie_big_nohaplotig	CDS	55469312	55469501	100	-	0	ID=FBgn0036144.1.mrna1.cds2;Name=FBgn0036144.1;Parent=FBgn0036144.1.mrna1;Target=FBgn0036144.1 142 331 +
Chr1	stalkie_big_nohaplotig	CDS	55466752	55466909	99	-	1	ID=FBgn0036144.1.mrna1.cds3;Name=FBgn0036144.1;Parent=FBgn0036144.1.mrna1;Target=FBgn0036144.1 332 489 +
Chr1	stalkie_big_nohaplotig	CDS	55466403	55466693	100	-	0	ID=FBgn0036144.1.mrna1.cds4;Name=FBgn0036144.1;Parent=FBgn0036144.1.mrna1;Target=FBgn0036144.1 490 780 +
Chr1	stalkie_big_nohaplotig	CDS	55466292	55466321	96	-	0	ID=FBgn0036144.1.mrna1.cds5;Name=FBgn0036144.1;Parent=FBgn0036144.1.mrna1;Target=FBgn0036144.1 781 810 +
Chr1	stalkie_big_nohaplotig	mRNA	165081528	165082859	.	-	.	ID=FBgn0023514.1.mrna1;Name=FBgn0023514.1;Parent=FBgn0023514.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1274;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	165082101	165082859	99	-	.	ID=FBgn0023514.1.mrna1.exon1;Name=FBgn0023514.1;Parent=FBgn0023514.1.mrna1;Target=FBgn0023514.1 1 759 +
Chr1	stalkie_big_nohaplotig	exon	165081528	165082043	100	-	.	ID=FBgn0023514.1.mrna1.exon2;Name=FBgn0023514.1;Parent=FBgn0023514.1.mrna1;Target=FBgn0023514.1 760 1275 +
Chr1	stalkie_big_nohaplotig	CDS	165082101	165082859	99	-	0	ID=FBgn0023514.1.mrna1.cds1;Name=FBgn0023514.1;Parent=FBgn0023514.1.mrna1;Target=FBgn0023514.1 1 759 +
Chr1	stalkie_big_nohaplotig	CDS	165081528	165082043	100	-	0	ID=FBgn0023514.1.mrna1.cds2;Name=FBgn0023514.1;Parent=FBgn0023514.1.mrna1;Target=FBgn0023514.1 760 1275 +
Chr1	stalkie_big_nohaplotig	mRNA	165084592	165085677	.	-	.	ID=FBgn0025630.1.mrna1;Name=FBgn0025630.1;Parent=FBgn0025630.1.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1085;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	165084592	165085677	99	-	.	ID=FBgn0025630.1.mrna1.exon1;Name=FBgn0025630.1;Parent=FBgn0025630.1.mrna1;Target=FBgn0025630.1 1086 1 .
Chr1	stalkie_big_nohaplotig	CDS	165084592	165085677	99	-	0	ID=FBgn0025630.1.mrna1.cds1;Name=FBgn0025630.1;Parent=FBgn0025630.1.mrna1;Target=FBgn0025630.1 1086 1 .
Chr2	stalkie_big_nohaplotig	mRNA	125705490	125711472	.	+	.	ID=FBgn0029088.1.mrna1;Name=FBgn0029088.1;Parent=FBgn0029088.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3636;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	125705490	125705639	100	+	.	ID=FBgn0029088.1.mrna1.exon1;Name=FBgn0029088.1;Parent=FBgn0029088.1.mrna1;Target=FBgn0029088.1 1 150 +
Chr2	stalkie_big_nohaplotig	exon	125705697	125706491	100	+	.	ID=FBgn0029088.1.mrna1.exon2;Name=FBgn0029088.1;Parent=FBgn0029088.1.mrna1;Target=FBgn0029088.1 151 945 +
Chr2	stalkie_big_nohaplotig	exon	125706546	125706713	100	+	.	ID=FBgn0029088.1.mrna1.exon3;Name=FBgn0029088.1;Parent=FBgn0029088.1.mrna1;Target=FBgn0029088.1 946 1113 +
Chr2	stalkie_big_nohaplotig	exon	125706770	125706861	100	+	.	ID=FBgn0029088.1.mrna1.exon4;Name=FBgn0029088.1;Parent=FBgn0029088.1.mrna1;Target=FBgn0029088.1 1114 1205 +
Chr2	stalkie_big_nohaplotig	exon	125707875	125708152	100	+	.	ID=FBgn0029088.1.mrna1.exon5;Name=FBgn0029088.1;Parent=FBgn0029088.1.mrna1;Target=FBgn0029088.1 1206 1483 +
Chr2	stalkie_big_nohaplotig	exon	125708228	125708477	100	+	.	ID=FBgn0029088.1.mrna1.exon6;Name=FBgn0029088.1;Parent=FBgn0029088.1.mrna1;Target=FBgn0029088.1 1484 1733 +
Chr2	stalkie_big_nohaplotig	exon	125708606	125708835	100	+	.	ID=FBgn0029088.1.mrna1.exon7;Name=FBgn0029088.1;Parent=FBgn0029088.1.mrna1;Target=FBgn0029088.1 1734 1963 +
Chr2	stalkie_big_nohaplotig	exon	125708902	125709056	100	+	.	ID=FBgn0029088.1.mrna1.exon8;Name=FBgn0029088.1;Parent=FBgn0029088.1.mrna1;Target=FBgn0029088.1 1964 2118 +
Chr2	stalkie_big_nohaplotig	exon	125709117	125709370	100	+	.	ID=FBgn0029088.1.mrna1.exon9;Name=FBgn0029088.1;Parent=FBgn0029088.1.mrna1;Target=FBgn0029088.1 2119 2372 +
Chr2	stalkie_big_nohaplotig	exon	125710149	125711120	100	+	.	ID=FBgn0029088.1.mrna1.exon10;Name=FBgn0029088.1;Parent=FBgn0029088.1.mrna1;Target=FBgn0029088.1 2373 3344 +
Chr2	stalkie_big_nohaplotig	exon	125711181	125711472	100	+	.	ID=FBgn0029088.1.mrna1.exon11;Name=FBgn0029088.1;Parent=FBgn0029088.1.mrna1;Target=FBgn0029088.1 3345 3636 +
Chr2	stalkie_big_nohaplotig	CDS	125705490	125705639	100	+	0	ID=FBgn0029088.1.mrna1.cds1;Name=FBgn0029088.1;Parent=FBgn0029088.1.mrna1;Target=FBgn0029088.1 1 150 +
Chr2	stalkie_big_nohaplotig	CDS	125705697	125706491	100	+	0	ID=FBgn0029088.1.mrna1.cds2;Name=FBgn0029088.1;Parent=FBgn0029088.1.mrna1;Target=FBgn0029088.1 151 945 +
Chr2	stalkie_big_nohaplotig	CDS	125706546	125706713	100	+	0	ID=FBgn0029088.1.mrna1.cds3;Name=FBgn0029088.1;Parent=FBgn0029088.1.mrna1;Target=FBgn0029088.1 946 1113 +
Chr2	stalkie_big_nohaplotig	CDS	125706770	125706861	100	+	0	ID=FBgn0029088.1.mrna1.cds4;Name=FBgn0029088.1;Parent=FBgn0029088.1.mrna1;Target=FBgn0029088.1 1114 1205 +
Chr2	stalkie_big_nohaplotig	CDS	125707875	125708152	100	+	2	ID=FBgn0029088.1.mrna1.cds5;Name=FBgn0029088.1;Parent=FBgn0029088.1.mrna1;Target=FBgn0029088.1 1206 1483 +
Chr2	stalkie_big_nohaplotig	CDS	125708228	125708477	100	+	1	ID=FBgn0029088.1.mrna1.cds6;Name=FBgn0029088.1;Parent=FBgn0029088.1.mrna1;Target=FBgn0029088.1 1484 1733 +
Chr2	stalkie_big_nohaplotig	CDS	125708606	125708835	100	+	2	ID=FBgn0029088.1.mrna1.cds7;Name=FBgn0029088.1;Parent=FBgn0029088.1.mrna1;Target=FBgn0029088.1 1734 1963 +
Chr2	stalkie_big_nohaplotig	CDS	125708902	125709056	100	+	1	ID=FBgn0029088.1.mrna1.cds8;Name=FBgn0029088.1;Parent=FBgn0029088.1.mrna1;Target=FBgn0029088.1 1964 2118 +
Chr2	stalkie_big_nohaplotig	CDS	125709117	125709370	100	+	0	ID=FBgn0029088.1.mrna1.cds9;Name=FBgn0029088.1;Parent=FBgn0029088.1.mrna1;Target=FBgn0029088.1 2119 2372 +
Chr2	stalkie_big_nohaplotig	CDS	125710149	125711120	100	+	2	ID=FBgn0029088.1.mrna1.cds10;Name=FBgn0029088.1;Parent=FBgn0029088.1.mrna1;Target=FBgn0029088.1 2373 3344 +
Chr2	stalkie_big_nohaplotig	CDS	125711181	125711472	100	+	2	ID=FBgn0029088.1.mrna1.cds11;Name=FBgn0029088.1;Parent=FBgn0029088.1.mrna1;Target=FBgn0029088.1 3345 3636 +
Chr2	stalkie_big_nohaplotig	mRNA	125684949	125687826	.	-	.	ID=FBgn0037236.1.mrna1;Name=FBgn0037236.1;Parent=FBgn0037236.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1857;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	125687750	125687826	100	-	.	ID=FBgn0037236.1.mrna1.exon1;Name=FBgn0037236.1;Parent=FBgn0037236.1.mrna1;Target=FBgn0037236.1 1 77 +
Chr2	stalkie_big_nohaplotig	exon	125686522	125687128	100	-	.	ID=FBgn0037236.1.mrna1.exon2;Name=FBgn0037236.1;Parent=FBgn0037236.1.mrna1;Target=FBgn0037236.1 78 684 +
Chr2	stalkie_big_nohaplotig	exon	125686049	125686465	100	-	.	ID=FBgn0037236.1.mrna1.exon3;Name=FBgn0037236.1;Parent=FBgn0037236.1.mrna1;Target=FBgn0037236.1 685 1101 +
Chr2	stalkie_big_nohaplotig	exon	125685401	125685812	100	-	.	ID=FBgn0037236.1.mrna1.exon4;Name=FBgn0037236.1;Parent=FBgn0037236.1.mrna1;Target=FBgn0037236.1 1102 1513 +
Chr2	stalkie_big_nohaplotig	exon	125685191	125685350	100	-	.	ID=FBgn0037236.1.mrna1.exon5;Name=FBgn0037236.1;Parent=FBgn0037236.1.mrna1;Target=FBgn0037236.1 1514 1673 +
Chr2	stalkie_big_nohaplotig	exon	125684949	125685132	100	-	.	ID=FBgn0037236.1.mrna1.exon6;Name=FBgn0037236.1;Parent=FBgn0037236.1.mrna1;Target=FBgn0037236.1 1674 1857 +
Chr2	stalkie_big_nohaplotig	CDS	125687750	125687826	100	-	0	ID=FBgn0037236.1.mrna1.cds1;Name=FBgn0037236.1;Parent=FBgn0037236.1.mrna1;Target=FBgn0037236.1 1 77 +
Chr2	stalkie_big_nohaplotig	CDS	125686522	125687128	100	-	2	ID=FBgn0037236.1.mrna1.cds2;Name=FBgn0037236.1;Parent=FBgn0037236.1.mrna1;Target=FBgn0037236.1 78 684 +
Chr2	stalkie_big_nohaplotig	CDS	125686049	125686465	100	-	0	ID=FBgn0037236.1.mrna1.cds3;Name=FBgn0037236.1;Parent=FBgn0037236.1.mrna1;Target=FBgn0037236.1 685 1101 +
Chr2	stalkie_big_nohaplotig	CDS	125685401	125685812	100	-	0	ID=FBgn0037236.1.mrna1.cds4;Name=FBgn0037236.1;Parent=FBgn0037236.1.mrna1;Target=FBgn0037236.1 1102 1513 +
Chr2	stalkie_big_nohaplotig	CDS	125685191	125685350	100	-	1	ID=FBgn0037236.1.mrna1.cds5;Name=FBgn0037236.1;Parent=FBgn0037236.1.mrna1;Target=FBgn0037236.1 1514 1673 +
Chr2	stalkie_big_nohaplotig	CDS	125684949	125685132	100	-	2	ID=FBgn0037236.1.mrna1.cds6;Name=FBgn0037236.1;Parent=FBgn0037236.1.mrna1;Target=FBgn0037236.1 1674 1857 +
Chr2	stalkie_big_nohaplotig	mRNA	125665040	125678523	.	+	.	ID=FBgn0038165.1.mrna1;Name=FBgn0038165.1;Parent=FBgn0038165.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1169;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	125665040	125665169	100	+	.	ID=FBgn0038165.1.mrna1.exon1;Name=FBgn0038165.1;Parent=FBgn0038165.1.mrna1;Target=FBgn0038165.1 1 130 +
Chr2	stalkie_big_nohaplotig	exon	125670508	125670790	100	+	.	ID=FBgn0038165.1.mrna1.exon2;Name=FBgn0038165.1;Parent=FBgn0038165.1.mrna1;Target=FBgn0038165.1 131 413 +
Chr2	stalkie_big_nohaplotig	exon	125670898	125671088	99	+	.	ID=FBgn0038165.1.mrna1.exon3;Name=FBgn0038165.1;Parent=FBgn0038165.1.mrna1;Target=FBgn0038165.1 414 604 +
Chr2	stalkie_big_nohaplotig	exon	125671151	125671338	100	+	.	ID=FBgn0038165.1.mrna1.exon4;Name=FBgn0038165.1;Parent=FBgn0038165.1.mrna1;Target=FBgn0038165.1 605 792 +
Chr2	stalkie_big_nohaplotig	exon	125677713	125677870	100	+	.	ID=FBgn0038165.1.mrna1.exon5;Name=FBgn0038165.1;Parent=FBgn0038165.1.mrna1;Target=FBgn0038165.1 793 950 +
Chr2	stalkie_big_nohaplotig	exon	125678098	125678118	100	+	.	ID=FBgn0038165.1.mrna1.exon6;Name=FBgn0038165.1;Parent=FBgn0038165.1.mrna1;Target=FBgn0038165.1 951 971 +
Chr2	stalkie_big_nohaplotig	exon	125678325	125678523	100	+	.	ID=FBgn0038165.1.mrna1.exon7;Name=FBgn0038165.1;Parent=FBgn0038165.1.mrna1;Target=FBgn0038165.1 972 1170 +
Chr2	stalkie_big_nohaplotig	CDS	125665040	125665169	100	+	0	ID=FBgn0038165.1.mrna1.cds1;Name=FBgn0038165.1;Parent=FBgn0038165.1.mrna1;Target=FBgn0038165.1 1 130 +
Chr2	stalkie_big_nohaplotig	CDS	125670508	125670790	100	+	1	ID=FBgn0038165.1.mrna1.cds2;Name=FBgn0038165.1;Parent=FBgn0038165.1.mrna1;Target=FBgn0038165.1 131 413 +
Chr2	stalkie_big_nohaplotig	CDS	125670898	125671088	99	+	2	ID=FBgn0038165.1.mrna1.cds3;Name=FBgn0038165.1;Parent=FBgn0038165.1.mrna1;Target=FBgn0038165.1 414 604 +
Chr2	stalkie_big_nohaplotig	CDS	125671151	125671338	100	+	1	ID=FBgn0038165.1.mrna1.cds4;Name=FBgn0038165.1;Parent=FBgn0038165.1.mrna1;Target=FBgn0038165.1 605 792 +
Chr2	stalkie_big_nohaplotig	CDS	125677713	125677870	100	+	0	ID=FBgn0038165.1.mrna1.cds5;Name=FBgn0038165.1;Parent=FBgn0038165.1.mrna1;Target=FBgn0038165.1 793 950 +
Chr2	stalkie_big_nohaplotig	CDS	125678098	125678118	100	+	2	ID=FBgn0038165.1.mrna1.cds6;Name=FBgn0038165.1;Parent=FBgn0038165.1.mrna1;Target=FBgn0038165.1 951 971 +
Chr2	stalkie_big_nohaplotig	CDS	125678325	125678523	100	+	2	ID=FBgn0038165.1.mrna1.cds7;Name=FBgn0038165.1;Parent=FBgn0038165.1.mrna1;Target=FBgn0038165.1 972 1170 +
Chr2	stalkie_big_nohaplotig	mRNA	42742468	42748369	.	-	.	ID=FBgn0033244.1.mrna1;Name=FBgn0033244.1;Parent=FBgn0033244.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1900;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	42748265	42748369	100	-	.	ID=FBgn0033244.1.mrna1.exon1;Name=FBgn0033244.1;Parent=FBgn0033244.1.mrna1;Target=FBgn0033244.1 1 105 +
Chr2	stalkie_big_nohaplotig	exon	42747778	42748066	100	-	.	ID=FBgn0033244.1.mrna1.exon2;Name=FBgn0033244.1;Parent=FBgn0033244.1.mrna1;Target=FBgn0033244.1 106 394 +
Chr2	stalkie_big_nohaplotig	exon	42744520	42744922	99	-	.	ID=FBgn0033244.1.mrna1.exon3;Name=FBgn0033244.1;Parent=FBgn0033244.1.mrna1;Target=FBgn0033244.1 395 797 +
Chr2	stalkie_big_nohaplotig	exon	42744277	42744455	99	-	.	ID=FBgn0033244.1.mrna1.exon4;Name=FBgn0033244.1;Parent=FBgn0033244.1.mrna1;Target=FBgn0033244.1 798 976 +
Chr2	stalkie_big_nohaplotig	exon	42743973	42744212	99	-	.	ID=FBgn0033244.1.mrna1.exon5;Name=FBgn0033244.1;Parent=FBgn0033244.1.mrna1;Target=FBgn0033244.1 977 1216 +
Chr2	stalkie_big_nohaplotig	exon	42742979	42743283	99	-	.	ID=FBgn0033244.1.mrna1.exon6;Name=FBgn0033244.1;Parent=FBgn0033244.1.mrna1;Target=FBgn0033244.1 1217 1521 +
Chr2	stalkie_big_nohaplotig	exon	42742726	42742915	100	-	.	ID=FBgn0033244.1.mrna1.exon7;Name=FBgn0033244.1;Parent=FBgn0033244.1.mrna1;Target=FBgn0033244.1 1522 1711 +
Chr2	stalkie_big_nohaplotig	exon	42742468	42742661	100	-	.	ID=FBgn0033244.1.mrna1.exon8;Name=FBgn0033244.1;Parent=FBgn0033244.1.mrna1;Target=FBgn0033244.1 1712 1905 +
Chr2	stalkie_big_nohaplotig	CDS	42748265	42748369	100	-	0	ID=FBgn0033244.1.mrna1.cds1;Name=FBgn0033244.1;Parent=FBgn0033244.1.mrna1;Target=FBgn0033244.1 1 105 +
Chr2	stalkie_big_nohaplotig	CDS	42747778	42748066	100	-	0	ID=FBgn0033244.1.mrna1.cds2;Name=FBgn0033244.1;Parent=FBgn0033244.1.mrna1;Target=FBgn0033244.1 106 394 +
Chr2	stalkie_big_nohaplotig	CDS	42744520	42744922	99	-	1	ID=FBgn0033244.1.mrna1.cds3;Name=FBgn0033244.1;Parent=FBgn0033244.1.mrna1;Target=FBgn0033244.1 395 797 +
Chr2	stalkie_big_nohaplotig	CDS	42744277	42744455	99	-	2	ID=FBgn0033244.1.mrna1.cds4;Name=FBgn0033244.1;Parent=FBgn0033244.1.mrna1;Target=FBgn0033244.1 798 976 +
Chr2	stalkie_big_nohaplotig	CDS	42743973	42744212	99	-	1	ID=FBgn0033244.1.mrna1.cds5;Name=FBgn0033244.1;Parent=FBgn0033244.1.mrna1;Target=FBgn0033244.1 977 1216 +
Chr2	stalkie_big_nohaplotig	CDS	42742979	42743283	99	-	1	ID=FBgn0033244.1.mrna1.cds6;Name=FBgn0033244.1;Parent=FBgn0033244.1.mrna1;Target=FBgn0033244.1 1217 1521 +
Chr2	stalkie_big_nohaplotig	CDS	42742726	42742915	100	-	0	ID=FBgn0033244.1.mrna1.cds7;Name=FBgn0033244.1;Parent=FBgn0033244.1.mrna1;Target=FBgn0033244.1 1522 1711 +
Chr2	stalkie_big_nohaplotig	CDS	42742468	42742661	100	-	1	ID=FBgn0033244.1.mrna1.cds8;Name=FBgn0033244.1;Parent=FBgn0033244.1.mrna1;Target=FBgn0033244.1 1712 1905 +
Chr2	stalkie_big_nohaplotig	mRNA	114140192	114141453	.	+	.	ID=AGAP013057.mrna1;Name=AGAP013057;Parent=AGAP013057.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1110;mismatches=2;indels=0;unknowns=1
Chr2	stalkie_big_nohaplotig	exon	114140192	114140761	99	+	.	ID=AGAP013057.mrna1.exon1;Name=AGAP013057;Parent=AGAP013057.mrna1;Target=AGAP013057 1 570 +
Chr2	stalkie_big_nohaplotig	exon	114140825	114141183	100	+	.	ID=AGAP013057.mrna1.exon2;Name=AGAP013057;Parent=AGAP013057.mrna1;Target=AGAP013057 571 929 +
Chr2	stalkie_big_nohaplotig	exon	114141270	114141453	99	+	.	ID=AGAP013057.mrna1.exon3;Name=AGAP013057;Parent=AGAP013057.mrna1;Target=AGAP013057 930 1113 +
Chr2	stalkie_big_nohaplotig	CDS	114140192	114140761	99	+	0	ID=AGAP013057.mrna1.cds1;Name=AGAP013057;Parent=AGAP013057.mrna1;Target=AGAP013057 1 570 +
Chr2	stalkie_big_nohaplotig	CDS	114140825	114141183	100	+	0	ID=AGAP013057.mrna1.cds2;Name=AGAP013057;Parent=AGAP013057.mrna1;Target=AGAP013057 571 929 +
Chr2	stalkie_big_nohaplotig	CDS	114141270	114141453	99	+	2	ID=AGAP013057.mrna1.cds3;Name=AGAP013057;Parent=AGAP013057.mrna1;Target=AGAP013057 930 1113 +
Chr2	stalkie_big_nohaplotig	mRNA	114149100	114150282	.	+	.	ID=FBgn0039265.1.mrna1;Name=FBgn0039265.1;Parent=FBgn0039265.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=915;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	114149100	114149241	100	+	.	ID=FBgn0039265.1.mrna1.exon1;Name=FBgn0039265.1;Parent=FBgn0039265.1.mrna1;Target=FBgn0039265.1 1 142 +
Chr2	stalkie_big_nohaplotig	exon	114149302	114149626	100	+	.	ID=FBgn0039265.1.mrna1.exon2;Name=FBgn0039265.1;Parent=FBgn0039265.1.mrna1;Target=FBgn0039265.1 143 467 +
Chr2	stalkie_big_nohaplotig	exon	114149704	114149865	99	+	.	ID=FBgn0039265.1.mrna1.exon3;Name=FBgn0039265.1;Parent=FBgn0039265.1.mrna1;Target=FBgn0039265.1 468 629 +
Chr2	stalkie_big_nohaplotig	exon	114149934	114150062	99	+	.	ID=FBgn0039265.1.mrna1.exon4;Name=FBgn0039265.1;Parent=FBgn0039265.1.mrna1;Target=FBgn0039265.1 630 758 +
Chr2	stalkie_big_nohaplotig	exon	114150123	114150282	99	+	.	ID=FBgn0039265.1.mrna1.exon5;Name=FBgn0039265.1;Parent=FBgn0039265.1.mrna1;Target=FBgn0039265.1 759 918 +
Chr2	stalkie_big_nohaplotig	CDS	114149100	114149241	100	+	0	ID=FBgn0039265.1.mrna1.cds1;Name=FBgn0039265.1;Parent=FBgn0039265.1.mrna1;Target=FBgn0039265.1 1 142 +
Chr2	stalkie_big_nohaplotig	CDS	114149302	114149626	100	+	1	ID=FBgn0039265.1.mrna1.cds2;Name=FBgn0039265.1;Parent=FBgn0039265.1.mrna1;Target=FBgn0039265.1 143 467 +
Chr2	stalkie_big_nohaplotig	CDS	114149704	114149865	99	+	2	ID=FBgn0039265.1.mrna1.cds3;Name=FBgn0039265.1;Parent=FBgn0039265.1.mrna1;Target=FBgn0039265.1 468 629 +
Chr2	stalkie_big_nohaplotig	CDS	114149934	114150062	99	+	2	ID=FBgn0039265.1.mrna1.cds4;Name=FBgn0039265.1;Parent=FBgn0039265.1.mrna1;Target=FBgn0039265.1 630 758 +
Chr2	stalkie_big_nohaplotig	CDS	114150123	114150282	99	+	2	ID=FBgn0039265.1.mrna1.cds5;Name=FBgn0039265.1;Parent=FBgn0039265.1.mrna1;Target=FBgn0039265.1 759 918 +
Chr1	stalkie_big_nohaplotig	mRNA	155997952	156008549	.	+	.	ID=FBgn0260748.1.mrna1;Name=FBgn0260748.1;Parent=FBgn0260748.1.path1;Dir=sensecoverage=83.4;identity=99.5;matches=3530;mismatches=18;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	155997952	155998068	99	+	.	ID=FBgn0260748.1.mrna1.exon1;Name=FBgn0260748.1;Parent=FBgn0260748.1.mrna1;Target=FBgn0260748.1 5 121 +
Chr1	stalkie_big_nohaplotig	exon	155998823	156000792	99	+	.	ID=FBgn0260748.1.mrna1.exon2;Name=FBgn0260748.1;Parent=FBgn0260748.1.mrna1;Target=FBgn0260748.1 122 2091 +
Chr1	stalkie_big_nohaplotig	exon	156000857	156001056	99	+	.	ID=FBgn0260748.1.mrna1.exon3;Name=FBgn0260748.1;Parent=FBgn0260748.1.mrna1;Target=FBgn0260748.1 2092 2291 +
Chr1	stalkie_big_nohaplotig	exon	156002171	156003132	99	+	.	ID=FBgn0260748.1.mrna1.exon4;Name=FBgn0260748.1;Parent=FBgn0260748.1.mrna1;Target=FBgn0260748.1 2292 3253 +
Chr1	stalkie_big_nohaplotig	exon	156003199	156003304	100	+	.	ID=FBgn0260748.1.mrna1.exon5;Name=FBgn0260748.1;Parent=FBgn0260748.1.mrna1;Target=FBgn0260748.1 3254 3359 +
Chr1	stalkie_big_nohaplotig	exon	156008357	156008549	98	+	.	ID=FBgn0260748.1.mrna1.exon6;Name=FBgn0260748.1;Parent=FBgn0260748.1.mrna1;Target=FBgn0260748.1 3360 3552 +
Chr1	stalkie_big_nohaplotig	CDS	155997954	155998068	99	+	0	ID=FBgn0260748.1.mrna1.cds1;Name=FBgn0260748.1;Parent=FBgn0260748.1.mrna1;Target=FBgn0260748.1 7 121 +
Chr1	stalkie_big_nohaplotig	CDS	155998823	156000792	99	+	1	ID=FBgn0260748.1.mrna1.cds2;Name=FBgn0260748.1;Parent=FBgn0260748.1.mrna1;Target=FBgn0260748.1 122 2091 +
Chr1	stalkie_big_nohaplotig	CDS	156000857	156001056	99	+	0	ID=FBgn0260748.1.mrna1.cds3;Name=FBgn0260748.1;Parent=FBgn0260748.1.mrna1;Target=FBgn0260748.1 2092 2291 +
Chr1	stalkie_big_nohaplotig	CDS	156002171	156003132	99	+	2	ID=FBgn0260748.1.mrna1.cds4;Name=FBgn0260748.1;Parent=FBgn0260748.1.mrna1;Target=FBgn0260748.1 2292 3253 +
Chr1	stalkie_big_nohaplotig	CDS	156003199	156003304	100	+	1	ID=FBgn0260748.1.mrna1.cds5;Name=FBgn0260748.1;Parent=FBgn0260748.1.mrna1;Target=FBgn0260748.1 3254 3359 +
Chr1	stalkie_big_nohaplotig	CDS	156008357	156008549	98	+	2	ID=FBgn0260748.1.mrna1.cds6;Name=FBgn0260748.1;Parent=FBgn0260748.1.mrna1;Target=FBgn0260748.1 3360 3552 +
Chr1	stalkie_big_nohaplotig	mRNA	21980221	21983003	.	+	.	ID=FBgn0004108.1.mrna1;Name=FBgn0004108.1;Parent=FBgn0004108.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=2538;mismatches=9;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	21980221	21980821	98	+	.	ID=FBgn0004108.1.mrna1.exon1;Name=FBgn0004108.1;Parent=FBgn0004108.1.mrna1;Target=FBgn0004108.1 1 601 +
Chr1	stalkie_big_nohaplotig	exon	21980891	21981204	100	+	.	ID=FBgn0004108.1.mrna1.exon2;Name=FBgn0004108.1;Parent=FBgn0004108.1.mrna1;Target=FBgn0004108.1 602 915 +
Chr1	stalkie_big_nohaplotig	exon	21981372	21983003	99	+	.	ID=FBgn0004108.1.mrna1.exon3;Name=FBgn0004108.1;Parent=FBgn0004108.1.mrna1;Target=FBgn0004108.1 916 2547 +
Chr1	stalkie_big_nohaplotig	CDS	21980221	21980821	98	+	0	ID=FBgn0004108.1.mrna1.cds1;Name=FBgn0004108.1;Parent=FBgn0004108.1.mrna1;Target=FBgn0004108.1 1 601 +
Chr1	stalkie_big_nohaplotig	CDS	21980891	21981204	100	+	1	ID=FBgn0004108.1.mrna1.cds2;Name=FBgn0004108.1;Parent=FBgn0004108.1.mrna1;Target=FBgn0004108.1 602 915 +
Chr1	stalkie_big_nohaplotig	CDS	21981372	21983003	99	+	0	ID=FBgn0004108.1.mrna1.cds3;Name=FBgn0004108.1;Parent=FBgn0004108.1.mrna1;Target=FBgn0004108.1 916 2547 +
Chr1	stalkie_big_nohaplotig	mRNA	18076296	18076949	.	+	.	ID=FBgn0036616.1.mrna1;Name=FBgn0036616.1;Parent=FBgn0036616.1.path1;Dir=sensecoverage=96.2;identity=99.8;matches=579;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	18076296	18076695	99	+	.	ID=FBgn0036616.1.mrna1.exon1;Name=FBgn0036616.1;Parent=FBgn0036616.1.mrna1;Target=FBgn0036616.1 24 423 +
Chr1	stalkie_big_nohaplotig	exon	18076770	18076949	100	+	.	ID=FBgn0036616.1.mrna1.exon2;Name=FBgn0036616.1;Parent=FBgn0036616.1.mrna1;Target=FBgn0036616.1 424 603 +
Chr1	stalkie_big_nohaplotig	CDS	18076297	18076695	99	+	0	ID=FBgn0036616.1.mrna1.cds1;Name=FBgn0036616.1;Parent=FBgn0036616.1.mrna1;Target=FBgn0036616.1 25 423 +
Chr1	stalkie_big_nohaplotig	CDS	18076770	18076949	100	+	0	ID=FBgn0036616.1.mrna1.cds2;Name=FBgn0036616.1;Parent=FBgn0036616.1.mrna1;Target=FBgn0036616.1 424 603 +
Chr1	stalkie_big_nohaplotig	mRNA	22821071	22821206	.	+	.	ID=FBgn0014073.1.mrna1;Name=FBgn0014073.1;Parent=FBgn0014073.1.path1;Dir=indeterminatecoverage=4.0;identity=100.0;matches=136;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	22821071	22821206	100	+	.	ID=FBgn0014073.1.mrna1.exon1;Name=FBgn0014073.1;Parent=FBgn0014073.1.mrna1;Target=FBgn0014073.1 136 1 .
Chr1	stalkie_big_nohaplotig	CDS	22821071	22821206	100	+	0	ID=FBgn0014073.1.mrna1.cds1;Name=FBgn0014073.1;Parent=FBgn0014073.1.mrna1;Target=FBgn0014073.1 136 1 .
Chr1	stalkie_big_nohaplotig	mRNA	55009743	55014283	.	+	.	ID=FBgn0014073.1.mrna2;Name=FBgn0014073.1;Parent=FBgn0014073.1.path2;Dir=sensecoverage=96.0;identity=99.9;matches=3273;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	55009743	55012085	100	+	.	ID=FBgn0014073.1.mrna2.exon1;Name=FBgn0014073.1;Parent=FBgn0014073.1.mrna2;Target=FBgn0014073.1 137 2479 +
Chr1	stalkie_big_nohaplotig	exon	55012149	55012342	100	+	.	ID=FBgn0014073.1.mrna2.exon2;Name=FBgn0014073.1;Parent=FBgn0014073.1.mrna2;Target=FBgn0014073.1 2480 2673 +
Chr1	stalkie_big_nohaplotig	exon	55013488	55013917	99	+	.	ID=FBgn0014073.1.mrna2.exon3;Name=FBgn0014073.1;Parent=FBgn0014073.1.mrna2;Target=FBgn0014073.1 2674 3103 +
Chr1	stalkie_big_nohaplotig	exon	55013976	55014283	99	+	.	ID=FBgn0014073.1.mrna2.exon4;Name=FBgn0014073.1;Parent=FBgn0014073.1.mrna2;Target=FBgn0014073.1 3104 3411 +
Chr1	stalkie_big_nohaplotig	CDS	55009743	55012085	100	+	1	ID=FBgn0014073.1.mrna2.cds1;Name=FBgn0014073.1;Parent=FBgn0014073.1.mrna2;Target=FBgn0014073.1 137 2479 +
Chr1	stalkie_big_nohaplotig	CDS	55012149	55012342	100	+	1	ID=FBgn0014073.1.mrna2.cds2;Name=FBgn0014073.1;Parent=FBgn0014073.1.mrna2;Target=FBgn0014073.1 2480 2673 +
Chr1	stalkie_big_nohaplotig	CDS	55013488	55013917	99	+	0	ID=FBgn0014073.1.mrna2.cds3;Name=FBgn0014073.1;Parent=FBgn0014073.1.mrna2;Target=FBgn0014073.1 2674 3103 +
Chr1	stalkie_big_nohaplotig	CDS	55013976	55014283	99	+	1	ID=FBgn0014073.1.mrna2.cds4;Name=FBgn0014073.1;Parent=FBgn0014073.1.mrna2;Target=FBgn0014073.1 3104 3411 +
Chr1	stalkie_big_nohaplotig	mRNA	37903981	37932231	.	+	.	ID=FBgn0052333.1.mrna1;Name=FBgn0052333.1;Parent=FBgn0052333.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=4994;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	37903981	37904147	100	+	.	ID=FBgn0052333.1.mrna1.exon1;Name=FBgn0052333.1;Parent=FBgn0052333.1.mrna1;Target=FBgn0052333.1 1 167 +
Chr1	stalkie_big_nohaplotig	exon	37911424	37911713	100	+	.	ID=FBgn0052333.1.mrna1.exon2;Name=FBgn0052333.1;Parent=FBgn0052333.1.mrna1;Target=FBgn0052333.1 168 457 +
Chr1	stalkie_big_nohaplotig	exon	37920878	37921124	100	+	.	ID=FBgn0052333.1.mrna1.exon3;Name=FBgn0052333.1;Parent=FBgn0052333.1.mrna1;Target=FBgn0052333.1 458 704 +
Chr1	stalkie_big_nohaplotig	exon	37926215	37926244	100	+	.	ID=FBgn0052333.1.mrna1.exon4;Name=FBgn0052333.1;Parent=FBgn0052333.1.mrna1;Target=FBgn0052333.1 705 734 +
Chr1	stalkie_big_nohaplotig	exon	37926541	37926871	100	+	.	ID=FBgn0052333.1.mrna1.exon5;Name=FBgn0052333.1;Parent=FBgn0052333.1.mrna1;Target=FBgn0052333.1 735 1065 +
Chr1	stalkie_big_nohaplotig	exon	37926931	37930220	99	+	.	ID=FBgn0052333.1.mrna1.exon6;Name=FBgn0052333.1;Parent=FBgn0052333.1.mrna1;Target=FBgn0052333.1 1066 4355 +
Chr1	stalkie_big_nohaplotig	exon	37930279	37930490	100	+	.	ID=FBgn0052333.1.mrna1.exon7;Name=FBgn0052333.1;Parent=FBgn0052333.1.mrna1;Target=FBgn0052333.1 4356 4567 +
Chr1	stalkie_big_nohaplotig	exon	37931741	37931981	100	+	.	ID=FBgn0052333.1.mrna1.exon8;Name=FBgn0052333.1;Parent=FBgn0052333.1.mrna1;Target=FBgn0052333.1 4568 4808 +
Chr1	stalkie_big_nohaplotig	exon	37932042	37932231	100	+	.	ID=FBgn0052333.1.mrna1.exon9;Name=FBgn0052333.1;Parent=FBgn0052333.1.mrna1;Target=FBgn0052333.1 4809 4998 +
Chr1	stalkie_big_nohaplotig	CDS	37903981	37904147	100	+	0	ID=FBgn0052333.1.mrna1.cds1;Name=FBgn0052333.1;Parent=FBgn0052333.1.mrna1;Target=FBgn0052333.1 1 167 +
Chr1	stalkie_big_nohaplotig	CDS	37911424	37911713	100	+	2	ID=FBgn0052333.1.mrna1.cds2;Name=FBgn0052333.1;Parent=FBgn0052333.1.mrna1;Target=FBgn0052333.1 168 457 +
Chr1	stalkie_big_nohaplotig	CDS	37920878	37921124	100	+	1	ID=FBgn0052333.1.mrna1.cds3;Name=FBgn0052333.1;Parent=FBgn0052333.1.mrna1;Target=FBgn0052333.1 458 704 +
Chr1	stalkie_big_nohaplotig	CDS	37926215	37926244	100	+	2	ID=FBgn0052333.1.mrna1.cds4;Name=FBgn0052333.1;Parent=FBgn0052333.1.mrna1;Target=FBgn0052333.1 705 734 +
Chr1	stalkie_big_nohaplotig	CDS	37926541	37926871	100	+	2	ID=FBgn0052333.1.mrna1.cds5;Name=FBgn0052333.1;Parent=FBgn0052333.1.mrna1;Target=FBgn0052333.1 735 1065 +
Chr1	stalkie_big_nohaplotig	CDS	37926931	37930220	99	+	0	ID=FBgn0052333.1.mrna1.cds6;Name=FBgn0052333.1;Parent=FBgn0052333.1.mrna1;Target=FBgn0052333.1 1066 4355 +
Chr1	stalkie_big_nohaplotig	CDS	37930279	37930490	100	+	2	ID=FBgn0052333.1.mrna1.cds7;Name=FBgn0052333.1;Parent=FBgn0052333.1.mrna1;Target=FBgn0052333.1 4356 4567 +
Chr1	stalkie_big_nohaplotig	CDS	37931741	37931981	100	+	1	ID=FBgn0052333.1.mrna1.cds8;Name=FBgn0052333.1;Parent=FBgn0052333.1.mrna1;Target=FBgn0052333.1 4568 4808 +
Chr1	stalkie_big_nohaplotig	CDS	37932042	37932231	100	+	2	ID=FBgn0052333.1.mrna1.cds9;Name=FBgn0052333.1;Parent=FBgn0052333.1.mrna1;Target=FBgn0052333.1 4809 4998 +
Chr1	stalkie_big_nohaplotig	mRNA	98713434	98735489	.	+	.	ID=FBgn0032997.1.mrna2;Name=FBgn0032997.1;Parent=FBgn0032997.1.path2;Dir=sensecoverage=95.9;identity=99.8;matches=1622;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	98713434	98713815	99	+	.	ID=FBgn0032997.1.mrna2.exon1;Name=FBgn0032997.1;Parent=FBgn0032997.1.mrna2;Target=FBgn0032997.1 70 451 +
Chr1	stalkie_big_nohaplotig	exon	98713869	98714092	99	+	.	ID=FBgn0032997.1.mrna2.exon2;Name=FBgn0032997.1;Parent=FBgn0032997.1.mrna2;Target=FBgn0032997.1 452 675 +
Chr1	stalkie_big_nohaplotig	exon	98714147	98714553	99	+	.	ID=FBgn0032997.1.mrna2.exon3;Name=FBgn0032997.1;Parent=FBgn0032997.1.mrna2;Target=FBgn0032997.1 676 1082 +
Chr1	stalkie_big_nohaplotig	exon	98716439	98716622	100	+	.	ID=FBgn0032997.1.mrna2.exon4;Name=FBgn0032997.1;Parent=FBgn0032997.1.mrna2;Target=FBgn0032997.1 1083 1266 +
Chr1	stalkie_big_nohaplotig	exon	98735061	98735489	99	+	.	ID=FBgn0032997.1.mrna2.exon5;Name=FBgn0032997.1;Parent=FBgn0032997.1.mrna2;Target=FBgn0032997.1 1267 1695 +
Chr1	stalkie_big_nohaplotig	CDS	98713434	98713815	99	+	0	ID=FBgn0032997.1.mrna2.cds1;Name=FBgn0032997.1;Parent=FBgn0032997.1.mrna2;Target=FBgn0032997.1 70 451 +
Chr1	stalkie_big_nohaplotig	CDS	98713869	98714092	99	+	1	ID=FBgn0032997.1.mrna2.cds2;Name=FBgn0032997.1;Parent=FBgn0032997.1.mrna2;Target=FBgn0032997.1 452 675 +
Chr1	stalkie_big_nohaplotig	CDS	98714147	98714553	99	+	0	ID=FBgn0032997.1.mrna2.cds3;Name=FBgn0032997.1;Parent=FBgn0032997.1.mrna2;Target=FBgn0032997.1 676 1082 +
Chr1	stalkie_big_nohaplotig	CDS	98716439	98716622	100	+	2	ID=FBgn0032997.1.mrna2.cds4;Name=FBgn0032997.1;Parent=FBgn0032997.1.mrna2;Target=FBgn0032997.1 1083 1266 +
Chr1	stalkie_big_nohaplotig	CDS	98735061	98735489	99	+	0	ID=FBgn0032997.1.mrna2.cds5;Name=FBgn0032997.1;Parent=FBgn0032997.1.mrna2;Target=FBgn0032997.1 1267 1695 +
Chr1	stalkie_big_nohaplotig	mRNA	121994028	121994930	.	+	.	ID=FBgn0034879.1.mrna1;Name=FBgn0034879.1;Parent=FBgn0034879.1.path1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=901;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	121994028	121994930	99	+	.	ID=FBgn0034879.1.mrna1.exon1;Name=FBgn0034879.1;Parent=FBgn0034879.1.mrna1;Target=FBgn0034879.1 903 1 .
Chr1	stalkie_big_nohaplotig	CDS	121994028	121994930	99	+	0	ID=FBgn0034879.1.mrna1.cds1;Name=FBgn0034879.1;Parent=FBgn0034879.1.mrna1;Target=FBgn0034879.1 903 1 .
Chr1	stalkie_big_nohaplotig	mRNA	121843847	121854701	.	+	.	ID=FBgn0025633.1.mrna1;Name=FBgn0025633.1;Parent=FBgn0025633.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2674;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	121843847	121844164	99	+	.	ID=FBgn0025633.1.mrna1.exon1;Name=FBgn0025633.1;Parent=FBgn0025633.1.mrna1;Target=FBgn0025633.1 1 318 +
Chr1	stalkie_big_nohaplotig	exon	121844250	121844390	99	+	.	ID=FBgn0025633.1.mrna1.exon2;Name=FBgn0025633.1;Parent=FBgn0025633.1.mrna1;Target=FBgn0025633.1 319 459 +
Chr1	stalkie_big_nohaplotig	exon	121849800	121849976	99	+	.	ID=FBgn0025633.1.mrna1.exon3;Name=FBgn0025633.1;Parent=FBgn0025633.1.mrna1;Target=FBgn0025633.1 460 636 +
Chr1	stalkie_big_nohaplotig	exon	121850041	121851000	99	+	.	ID=FBgn0025633.1.mrna1.exon4;Name=FBgn0025633.1;Parent=FBgn0025633.1.mrna1;Target=FBgn0025633.1 637 1596 +
Chr1	stalkie_big_nohaplotig	exon	121851072	121851215	100	+	.	ID=FBgn0025633.1.mrna1.exon5;Name=FBgn0025633.1;Parent=FBgn0025633.1.mrna1;Target=FBgn0025633.1 1597 1740 +
Chr1	stalkie_big_nohaplotig	exon	121851286	121851454	100	+	.	ID=FBgn0025633.1.mrna1.exon6;Name=FBgn0025633.1;Parent=FBgn0025633.1.mrna1;Target=FBgn0025633.1 1741 1909 +
Chr1	stalkie_big_nohaplotig	exon	121851529	121851677	100	+	.	ID=FBgn0025633.1.mrna1.exon7;Name=FBgn0025633.1;Parent=FBgn0025633.1.mrna1;Target=FBgn0025633.1 1910 2058 +
Chr1	stalkie_big_nohaplotig	exon	121853437	121853562	100	+	.	ID=FBgn0025633.1.mrna1.exon8;Name=FBgn0025633.1;Parent=FBgn0025633.1.mrna1;Target=FBgn0025633.1 2059 2184 +
Chr1	stalkie_big_nohaplotig	exon	121853638	121853770	100	+	.	ID=FBgn0025633.1.mrna1.exon9;Name=FBgn0025633.1;Parent=FBgn0025633.1.mrna1;Target=FBgn0025633.1 2185 2317 +
Chr1	stalkie_big_nohaplotig	exon	121854272	121854546	99	+	.	ID=FBgn0025633.1.mrna1.exon10;Name=FBgn0025633.1;Parent=FBgn0025633.1.mrna1;Target=FBgn0025633.1 2318 2592 +
Chr1	stalkie_big_nohaplotig	exon	121854615	121854701	100	+	.	ID=FBgn0025633.1.mrna1.exon11;Name=FBgn0025633.1;Parent=FBgn0025633.1.mrna1;Target=FBgn0025633.1 2593 2679 +
Chr1	stalkie_big_nohaplotig	CDS	121843847	121844164	99	+	0	ID=FBgn0025633.1.mrna1.cds1;Name=FBgn0025633.1;Parent=FBgn0025633.1.mrna1;Target=FBgn0025633.1 1 318 +
Chr1	stalkie_big_nohaplotig	CDS	121844250	121844390	99	+	0	ID=FBgn0025633.1.mrna1.cds2;Name=FBgn0025633.1;Parent=FBgn0025633.1.mrna1;Target=FBgn0025633.1 319 459 +
Chr1	stalkie_big_nohaplotig	CDS	121849800	121849976	99	+	0	ID=FBgn0025633.1.mrna1.cds3;Name=FBgn0025633.1;Parent=FBgn0025633.1.mrna1;Target=FBgn0025633.1 460 636 +
Chr1	stalkie_big_nohaplotig	CDS	121850041	121851000	99	+	0	ID=FBgn0025633.1.mrna1.cds4;Name=FBgn0025633.1;Parent=FBgn0025633.1.mrna1;Target=FBgn0025633.1 637 1596 +
Chr1	stalkie_big_nohaplotig	CDS	121851072	121851215	100	+	0	ID=FBgn0025633.1.mrna1.cds5;Name=FBgn0025633.1;Parent=FBgn0025633.1.mrna1;Target=FBgn0025633.1 1597 1740 +
Chr1	stalkie_big_nohaplotig	CDS	121851286	121851454	100	+	0	ID=FBgn0025633.1.mrna1.cds6;Name=FBgn0025633.1;Parent=FBgn0025633.1.mrna1;Target=FBgn0025633.1 1741 1909 +
Chr1	stalkie_big_nohaplotig	CDS	121851529	121851677	100	+	1	ID=FBgn0025633.1.mrna1.cds7;Name=FBgn0025633.1;Parent=FBgn0025633.1.mrna1;Target=FBgn0025633.1 1910 2058 +
Chr1	stalkie_big_nohaplotig	CDS	121853437	121853562	100	+	0	ID=FBgn0025633.1.mrna1.cds8;Name=FBgn0025633.1;Parent=FBgn0025633.1.mrna1;Target=FBgn0025633.1 2059 2184 +
Chr1	stalkie_big_nohaplotig	CDS	121853638	121853770	100	+	0	ID=FBgn0025633.1.mrna1.cds9;Name=FBgn0025633.1;Parent=FBgn0025633.1.mrna1;Target=FBgn0025633.1 2185 2317 +
Chr1	stalkie_big_nohaplotig	CDS	121854272	121854546	99	+	1	ID=FBgn0025633.1.mrna1.cds10;Name=FBgn0025633.1;Parent=FBgn0025633.1.mrna1;Target=FBgn0025633.1 2318 2592 +
Chr1	stalkie_big_nohaplotig	CDS	121854615	121854701	100	+	0	ID=FBgn0025633.1.mrna1.cds11;Name=FBgn0025633.1;Parent=FBgn0025633.1.mrna1;Target=FBgn0025633.1 2593 2679 +
Chr1	stalkie_big_nohaplotig	mRNA	121659206	121661645	.	-	.	ID=ORF844.mrna1;Name=ORF844;Parent=ORF844.path1;Dir=sensecoverage=99.2;identity=99.0;matches=1373;mismatches=14;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	121661567	121661645	97	-	.	ID=ORF844.mrna1.exon1;Name=ORF844;Parent=ORF844.mrna1;Target=ORF844 12 90 +
Chr1	stalkie_big_nohaplotig	exon	121660587	121660759	97	-	.	ID=ORF844.mrna1.exon2;Name=ORF844;Parent=ORF844.mrna1;Target=ORF844 91 263 +
Chr1	stalkie_big_nohaplotig	exon	121660128	121660527	99	-	.	ID=ORF844.mrna1.exon3;Name=ORF844;Parent=ORF844.mrna1;Target=ORF844 264 663 +
Chr1	stalkie_big_nohaplotig	exon	121659914	121660063	98	-	.	ID=ORF844.mrna1.exon4;Name=ORF844;Parent=ORF844.mrna1;Target=ORF844 664 813 +
Chr1	stalkie_big_nohaplotig	exon	121659393	121659855	99	-	.	ID=ORF844.mrna1.exon5;Name=ORF844;Parent=ORF844.mrna1;Target=ORF844 814 1276 +
Chr1	stalkie_big_nohaplotig	exon	121659206	121659327	100	-	.	ID=ORF844.mrna1.exon6;Name=ORF844;Parent=ORF844.mrna1;Target=ORF844 1277 1398 +
Chr1	stalkie_big_nohaplotig	CDS	121661567	121661644	97	-	0	ID=ORF844.mrna1.cds1;Name=ORF844;Parent=ORF844.mrna1;Target=ORF844 13 90 +
Chr1	stalkie_big_nohaplotig	CDS	121660587	121660759	97	-	0	ID=ORF844.mrna1.cds2;Name=ORF844;Parent=ORF844.mrna1;Target=ORF844 91 263 +
Chr1	stalkie_big_nohaplotig	CDS	121660128	121660527	99	-	2	ID=ORF844.mrna1.cds3;Name=ORF844;Parent=ORF844.mrna1;Target=ORF844 264 663 +
Chr1	stalkie_big_nohaplotig	CDS	121659914	121660063	98	-	0	ID=ORF844.mrna1.cds4;Name=ORF844;Parent=ORF844.mrna1;Target=ORF844 664 813 +
Chr1	stalkie_big_nohaplotig	CDS	121659393	121659855	99	-	0	ID=ORF844.mrna1.cds5;Name=ORF844;Parent=ORF844.mrna1;Target=ORF844 814 1276 +
Chr1	stalkie_big_nohaplotig	CDS	121659206	121659327	100	-	1	ID=ORF844.mrna1.cds6;Name=ORF844;Parent=ORF844.mrna1;Target=ORF844 1277 1398 +
Chr1	stalkie_big_nohaplotig	mRNA	143968361	143972334	.	+	.	ID=FBgn0002906.2.mrna1;Name=FBgn0002906.2;Parent=FBgn0002906.2.path1;Dir=sensecoverage=100.0;identity=99.5;matches=3078;mismatches=15;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	143968361	143969917	99	+	.	ID=FBgn0002906.2.mrna1.exon1;Name=FBgn0002906.2;Parent=FBgn0002906.2.mrna1;Target=FBgn0002906.2 1 1557 +
Chr1	stalkie_big_nohaplotig	exon	143969977	143970764	99	+	.	ID=FBgn0002906.2.mrna1.exon2;Name=FBgn0002906.2;Parent=FBgn0002906.2.mrna1;Target=FBgn0002906.2 1558 2345 +
Chr1	stalkie_big_nohaplotig	exon	143971587	143972334	99	+	.	ID=FBgn0002906.2.mrna1.exon3;Name=FBgn0002906.2;Parent=FBgn0002906.2.mrna1;Target=FBgn0002906.2 2346 3093 +
Chr1	stalkie_big_nohaplotig	CDS	143968361	143969917	99	+	0	ID=FBgn0002906.2.mrna1.cds1;Name=FBgn0002906.2;Parent=FBgn0002906.2.mrna1;Target=FBgn0002906.2 1 1557 +
Chr1	stalkie_big_nohaplotig	CDS	143969977	143970764	99	+	0	ID=FBgn0002906.2.mrna1.cds2;Name=FBgn0002906.2;Parent=FBgn0002906.2.mrna1;Target=FBgn0002906.2 1558 2345 +
Chr1	stalkie_big_nohaplotig	CDS	143971587	143972334	99	+	2	ID=FBgn0002906.2.mrna1.cds3;Name=FBgn0002906.2;Parent=FBgn0002906.2.mrna1;Target=FBgn0002906.2 2346 3093 +
Chr2	stalkie_big_nohaplotig	mRNA	33518360	33530224	.	-	.	ID=FBgn0004919.1.mrna1;Name=FBgn0004919.1;Parent=FBgn0004919.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1559;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	33529645	33530224	99	-	.	ID=FBgn0004919.1.mrna1.exon1;Name=FBgn0004919.1;Parent=FBgn0004919.1.mrna1;Target=FBgn0004919.1 1 580 +
Chr2	stalkie_big_nohaplotig	exon	33526558	33526690	100	-	.	ID=FBgn0004919.1.mrna1.exon2;Name=FBgn0004919.1;Parent=FBgn0004919.1.mrna1;Target=FBgn0004919.1 581 713 +
Chr2	stalkie_big_nohaplotig	exon	33522546	33522663	100	-	.	ID=FBgn0004919.1.mrna1.exon3;Name=FBgn0004919.1;Parent=FBgn0004919.1.mrna1;Target=FBgn0004919.1 714 831 +
Chr2	stalkie_big_nohaplotig	exon	33519021	33519172	100	-	.	ID=FBgn0004919.1.mrna1.exon4;Name=FBgn0004919.1;Parent=FBgn0004919.1.mrna1;Target=FBgn0004919.1 832 983 +
Chr2	stalkie_big_nohaplotig	exon	33518360	33518936	100	-	.	ID=FBgn0004919.1.mrna1.exon5;Name=FBgn0004919.1;Parent=FBgn0004919.1.mrna1;Target=FBgn0004919.1 984 1560 +
Chr2	stalkie_big_nohaplotig	CDS	33529645	33530224	99	-	0	ID=FBgn0004919.1.mrna1.cds1;Name=FBgn0004919.1;Parent=FBgn0004919.1.mrna1;Target=FBgn0004919.1 1 580 +
Chr2	stalkie_big_nohaplotig	CDS	33526558	33526690	100	-	1	ID=FBgn0004919.1.mrna1.cds2;Name=FBgn0004919.1;Parent=FBgn0004919.1.mrna1;Target=FBgn0004919.1 581 713 +
Chr2	stalkie_big_nohaplotig	CDS	33522546	33522663	100	-	2	ID=FBgn0004919.1.mrna1.cds3;Name=FBgn0004919.1;Parent=FBgn0004919.1.mrna1;Target=FBgn0004919.1 714 831 +
Chr2	stalkie_big_nohaplotig	CDS	33519021	33519172	100	-	0	ID=FBgn0004919.1.mrna1.cds4;Name=FBgn0004919.1;Parent=FBgn0004919.1.mrna1;Target=FBgn0004919.1 832 983 +
Chr2	stalkie_big_nohaplotig	CDS	33518360	33518936	100	-	2	ID=FBgn0004919.1.mrna1.cds5;Name=FBgn0004919.1;Parent=FBgn0004919.1.mrna1;Target=FBgn0004919.1 984 1560 +
ChrX	stalkie_big_nohaplotig	mRNA	42913870	42914751	.	-	.	ID=FBgn0019982.2.mrna1;Name=FBgn0019982.2;Parent=FBgn0019982.2.path1;Dir=sensecoverage=100.0;identity=100.0;matches=732;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	42914655	42914751	100	-	.	ID=FBgn0019982.2.mrna1.exon1;Name=FBgn0019982.2;Parent=FBgn0019982.2.mrna1;Target=FBgn0019982.2 1 97 +
ChrX	stalkie_big_nohaplotig	exon	42914347	42914565	100	-	.	ID=FBgn0019982.2.mrna1.exon2;Name=FBgn0019982.2;Parent=FBgn0019982.2.mrna1;Target=FBgn0019982.2 98 316 +
ChrX	stalkie_big_nohaplotig	exon	42913870	42914285	100	-	.	ID=FBgn0019982.2.mrna1.exon3;Name=FBgn0019982.2;Parent=FBgn0019982.2.mrna1;Target=FBgn0019982.2 317 732 +
ChrX	stalkie_big_nohaplotig	CDS	42914655	42914751	100	-	0	ID=FBgn0019982.2.mrna1.cds1;Name=FBgn0019982.2;Parent=FBgn0019982.2.mrna1;Target=FBgn0019982.2 1 97 +
ChrX	stalkie_big_nohaplotig	CDS	42914347	42914565	100	-	1	ID=FBgn0019982.2.mrna1.cds2;Name=FBgn0019982.2;Parent=FBgn0019982.2.mrna1;Target=FBgn0019982.2 98 316 +
ChrX	stalkie_big_nohaplotig	CDS	42913870	42914285	100	-	1	ID=FBgn0019982.2.mrna1.cds3;Name=FBgn0019982.2;Parent=FBgn0019982.2.mrna1;Target=FBgn0019982.2 317 732 +
ChrX	stalkie_big_nohaplotig	mRNA	42901654	42911445	.	-	.	ID=FBgn0025684.1.mrna1;Name=FBgn0025684.1;Parent=FBgn0025684.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1317;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	42911369	42911445	100	-	.	ID=FBgn0025684.1.mrna1.exon1;Name=FBgn0025684.1;Parent=FBgn0025684.1.mrna1;Target=FBgn0025684.1 1 77 +
ChrX	stalkie_big_nohaplotig	exon	42911138	42911309	100	-	.	ID=FBgn0025684.1.mrna1.exon2;Name=FBgn0025684.1;Parent=FBgn0025684.1.mrna1;Target=FBgn0025684.1 78 249 +
ChrX	stalkie_big_nohaplotig	exon	42907777	42907992	100	-	.	ID=FBgn0025684.1.mrna1.exon3;Name=FBgn0025684.1;Parent=FBgn0025684.1.mrna1;Target=FBgn0025684.1 250 465 +
ChrX	stalkie_big_nohaplotig	exon	42901952	42902558	100	-	.	ID=FBgn0025684.1.mrna1.exon4;Name=FBgn0025684.1;Parent=FBgn0025684.1.mrna1;Target=FBgn0025684.1 466 1072 +
ChrX	stalkie_big_nohaplotig	exon	42901654	42901898	100	-	.	ID=FBgn0025684.1.mrna1.exon5;Name=FBgn0025684.1;Parent=FBgn0025684.1.mrna1;Target=FBgn0025684.1 1073 1317 +
ChrX	stalkie_big_nohaplotig	CDS	42911369	42911445	100	-	0	ID=FBgn0025684.1.mrna1.cds1;Name=FBgn0025684.1;Parent=FBgn0025684.1.mrna1;Target=FBgn0025684.1 1 77 +
ChrX	stalkie_big_nohaplotig	CDS	42911138	42911309	100	-	2	ID=FBgn0025684.1.mrna1.cds2;Name=FBgn0025684.1;Parent=FBgn0025684.1.mrna1;Target=FBgn0025684.1 78 249 +
ChrX	stalkie_big_nohaplotig	CDS	42907777	42907992	100	-	0	ID=FBgn0025684.1.mrna1.cds3;Name=FBgn0025684.1;Parent=FBgn0025684.1.mrna1;Target=FBgn0025684.1 250 465 +
ChrX	stalkie_big_nohaplotig	CDS	42901952	42902558	100	-	0	ID=FBgn0025684.1.mrna1.cds4;Name=FBgn0025684.1;Parent=FBgn0025684.1.mrna1;Target=FBgn0025684.1 466 1072 +
ChrX	stalkie_big_nohaplotig	CDS	42901654	42901898	100	-	1	ID=FBgn0025684.1.mrna1.cds5;Name=FBgn0025684.1;Parent=FBgn0025684.1.mrna1;Target=FBgn0025684.1 1073 1317 +
ChrX	stalkie_big_nohaplotig	mRNA	42945566	42978025	.	-	.	ID=FBgn0011603.1.mrna1;Name=FBgn0011603.1;Parent=FBgn0011603.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2354;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	42977917	42978025	100	-	.	ID=FBgn0011603.1.mrna1.exon1;Name=FBgn0011603.1;Parent=FBgn0011603.1.mrna1;Target=FBgn0011603.1 1 109 +
ChrX	stalkie_big_nohaplotig	exon	42972081	42972345	100	-	.	ID=FBgn0011603.1.mrna1.exon2;Name=FBgn0011603.1;Parent=FBgn0011603.1.mrna1;Target=FBgn0011603.1 110 374 +
ChrX	stalkie_big_nohaplotig	exon	42957086	42957270	100	-	.	ID=FBgn0011603.1.mrna1.exon3;Name=FBgn0011603.1;Parent=FBgn0011603.1.mrna1;Target=FBgn0011603.1 375 559 +
ChrX	stalkie_big_nohaplotig	exon	42954812	42954946	100	-	.	ID=FBgn0011603.1.mrna1.exon4;Name=FBgn0011603.1;Parent=FBgn0011603.1.mrna1;Target=FBgn0011603.1 560 694 +
ChrX	stalkie_big_nohaplotig	exon	42948347	42948569	100	-	.	ID=FBgn0011603.1.mrna1.exon5;Name=FBgn0011603.1;Parent=FBgn0011603.1.mrna1;Target=FBgn0011603.1 695 917 +
ChrX	stalkie_big_nohaplotig	exon	42948156	42948288	100	-	.	ID=FBgn0011603.1.mrna1.exon6;Name=FBgn0011603.1;Parent=FBgn0011603.1.mrna1;Target=FBgn0011603.1 918 1050 +
ChrX	stalkie_big_nohaplotig	exon	42946658	42947134	100	-	.	ID=FBgn0011603.1.mrna1.exon7;Name=FBgn0011603.1;Parent=FBgn0011603.1.mrna1;Target=FBgn0011603.1 1051 1527 +
ChrX	stalkie_big_nohaplotig	exon	42946444	42946584	100	-	.	ID=FBgn0011603.1.mrna1.exon8;Name=FBgn0011603.1;Parent=FBgn0011603.1.mrna1;Target=FBgn0011603.1 1528 1668 +
ChrX	stalkie_big_nohaplotig	exon	42946180	42946380	100	-	.	ID=FBgn0011603.1.mrna1.exon9;Name=FBgn0011603.1;Parent=FBgn0011603.1.mrna1;Target=FBgn0011603.1 1669 1869 +
ChrX	stalkie_big_nohaplotig	exon	42945936	42946112	100	-	.	ID=FBgn0011603.1.mrna1.exon10;Name=FBgn0011603.1;Parent=FBgn0011603.1.mrna1;Target=FBgn0011603.1 1870 2046 +
ChrX	stalkie_big_nohaplotig	exon	42945566	42945874	99	-	.	ID=FBgn0011603.1.mrna1.exon11;Name=FBgn0011603.1;Parent=FBgn0011603.1.mrna1;Target=FBgn0011603.1 2047 2355 +
ChrX	stalkie_big_nohaplotig	CDS	42977917	42978025	100	-	0	ID=FBgn0011603.1.mrna1.cds1;Name=FBgn0011603.1;Parent=FBgn0011603.1.mrna1;Target=FBgn0011603.1 1 109 +
ChrX	stalkie_big_nohaplotig	CDS	42972081	42972345	100	-	1	ID=FBgn0011603.1.mrna1.cds2;Name=FBgn0011603.1;Parent=FBgn0011603.1.mrna1;Target=FBgn0011603.1 110 374 +
ChrX	stalkie_big_nohaplotig	CDS	42957086	42957270	100	-	2	ID=FBgn0011603.1.mrna1.cds3;Name=FBgn0011603.1;Parent=FBgn0011603.1.mrna1;Target=FBgn0011603.1 375 559 +
ChrX	stalkie_big_nohaplotig	CDS	42954812	42954946	100	-	1	ID=FBgn0011603.1.mrna1.cds4;Name=FBgn0011603.1;Parent=FBgn0011603.1.mrna1;Target=FBgn0011603.1 560 694 +
ChrX	stalkie_big_nohaplotig	CDS	42948347	42948569	100	-	1	ID=FBgn0011603.1.mrna1.cds5;Name=FBgn0011603.1;Parent=FBgn0011603.1.mrna1;Target=FBgn0011603.1 695 917 +
ChrX	stalkie_big_nohaplotig	CDS	42948156	42948288	100	-	2	ID=FBgn0011603.1.mrna1.cds6;Name=FBgn0011603.1;Parent=FBgn0011603.1.mrna1;Target=FBgn0011603.1 918 1050 +
ChrX	stalkie_big_nohaplotig	CDS	42946658	42947134	100	-	0	ID=FBgn0011603.1.mrna1.cds7;Name=FBgn0011603.1;Parent=FBgn0011603.1.mrna1;Target=FBgn0011603.1 1051 1527 +
ChrX	stalkie_big_nohaplotig	CDS	42946444	42946584	100	-	0	ID=FBgn0011603.1.mrna1.cds8;Name=FBgn0011603.1;Parent=FBgn0011603.1.mrna1;Target=FBgn0011603.1 1528 1668 +
ChrX	stalkie_big_nohaplotig	CDS	42946180	42946380	100	-	0	ID=FBgn0011603.1.mrna1.cds9;Name=FBgn0011603.1;Parent=FBgn0011603.1.mrna1;Target=FBgn0011603.1 1669 1869 +
ChrX	stalkie_big_nohaplotig	CDS	42945936	42946112	100	-	0	ID=FBgn0011603.1.mrna1.cds10;Name=FBgn0011603.1;Parent=FBgn0011603.1.mrna1;Target=FBgn0011603.1 1870 2046 +
ChrX	stalkie_big_nohaplotig	CDS	42945566	42945874	99	-	0	ID=FBgn0011603.1.mrna1.cds11;Name=FBgn0011603.1;Parent=FBgn0011603.1.mrna1;Target=FBgn0011603.1 2047 2355 +
ChrX	stalkie_big_nohaplotig	mRNA	42938491	42941622	.	-	.	ID=FBgn0031608.1.mrna1;Name=FBgn0031608.1;Parent=FBgn0031608.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1923;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	42941425	42941622	100	-	.	ID=FBgn0031608.1.mrna1.exon1;Name=FBgn0031608.1;Parent=FBgn0031608.1.mrna1;Target=FBgn0031608.1 1 198 +
ChrX	stalkie_big_nohaplotig	exon	42938491	42940215	100	-	.	ID=FBgn0031608.1.mrna1.exon2;Name=FBgn0031608.1;Parent=FBgn0031608.1.mrna1;Target=FBgn0031608.1 199 1923 +
ChrX	stalkie_big_nohaplotig	CDS	42941425	42941622	100	-	0	ID=FBgn0031608.1.mrna1.cds1;Name=FBgn0031608.1;Parent=FBgn0031608.1.mrna1;Target=FBgn0031608.1 1 198 +
ChrX	stalkie_big_nohaplotig	CDS	42938491	42940215	100	-	0	ID=FBgn0031608.1.mrna1.cds2;Name=FBgn0031608.1;Parent=FBgn0031608.1.mrna1;Target=FBgn0031608.1 199 1923 +
ChrX	stalkie_big_nohaplotig	mRNA	42646901	42679341	.	-	.	ID=FBgn0014396.1.mrna1;Name=FBgn0014396.1;Parent=FBgn0014396.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=4568;mismatches=0;indels=2;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	42679164	42679341	100	-	.	ID=FBgn0014396.1.mrna1.exon1;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 1 178 +
ChrX	stalkie_big_nohaplotig	exon	42678300	42679076	100	-	.	ID=FBgn0014396.1.mrna1.exon2;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 179 955 +
ChrX	stalkie_big_nohaplotig	exon	42677345	42678233	100	-	.	ID=FBgn0014396.1.mrna1.exon3;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 956 1844 +
ChrX	stalkie_big_nohaplotig	exon	42677136	42677277	100	-	.	ID=FBgn0014396.1.mrna1.exon4;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 1845 1986 +
ChrX	stalkie_big_nohaplotig	exon	42676787	42677074	100	-	.	ID=FBgn0014396.1.mrna1.exon5;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 1987 2274 +
ChrX	stalkie_big_nohaplotig	exon	42676504	42676724	100	-	.	ID=FBgn0014396.1.mrna1.exon6;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 2275 2495 +
ChrX	stalkie_big_nohaplotig	exon	42674829	42675027	100	-	.	ID=FBgn0014396.1.mrna1.exon7;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 2496 2694 +
ChrX	stalkie_big_nohaplotig	exon	42674628	42674755	100	-	.	ID=FBgn0014396.1.mrna1.exon8;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 2695 2822 +
ChrX	stalkie_big_nohaplotig	exon	42673593	42673746	100	-	.	ID=FBgn0014396.1.mrna1.exon9;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 2823 2976 +
ChrX	stalkie_big_nohaplotig	exon	42673377	42673520	100	-	.	ID=FBgn0014396.1.mrna1.exon10;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 2977 3120 +
ChrX	stalkie_big_nohaplotig	exon	42671672	42671846	100	-	.	ID=FBgn0014396.1.mrna1.exon11;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 3121 3295 +
ChrX	stalkie_big_nohaplotig	exon	42671202	42671402	100	-	.	ID=FBgn0014396.1.mrna1.exon12;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 3296 3496 +
ChrX	stalkie_big_nohaplotig	exon	42670838	42671120	100	-	.	ID=FBgn0014396.1.mrna1.exon13;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 3497 3779 +
ChrX	stalkie_big_nohaplotig	exon	42669162	42669290	100	-	.	ID=FBgn0014396.1.mrna1.exon14;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 3780 3908 +
ChrX	stalkie_big_nohaplotig	exon	42655547	42656116	99	-	.	ID=FBgn0014396.1.mrna1.exon15;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 3909 4478 +
ChrX	stalkie_big_nohaplotig	exon	42646901	42646991	100	-	.	ID=FBgn0014396.1.mrna1.exon16;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 4479 4569 +
ChrX	stalkie_big_nohaplotig	CDS	42679164	42679341	100	-	0	ID=FBgn0014396.1.mrna1.cds1;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 1 178 +
ChrX	stalkie_big_nohaplotig	CDS	42678300	42679076	100	-	1	ID=FBgn0014396.1.mrna1.cds2;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 179 955 +
ChrX	stalkie_big_nohaplotig	CDS	42677345	42678233	100	-	1	ID=FBgn0014396.1.mrna1.cds3;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 956 1844 +
ChrX	stalkie_big_nohaplotig	CDS	42677136	42677277	100	-	2	ID=FBgn0014396.1.mrna1.cds4;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 1845 1986 +
ChrX	stalkie_big_nohaplotig	CDS	42676787	42677074	100	-	0	ID=FBgn0014396.1.mrna1.cds5;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 1987 2274 +
ChrX	stalkie_big_nohaplotig	CDS	42676504	42676724	100	-	0	ID=FBgn0014396.1.mrna1.cds6;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 2275 2495 +
ChrX	stalkie_big_nohaplotig	CDS	42674829	42675027	100	-	2	ID=FBgn0014396.1.mrna1.cds7;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 2496 2694 +
ChrX	stalkie_big_nohaplotig	CDS	42674628	42674755	100	-	0	ID=FBgn0014396.1.mrna1.cds8;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 2695 2822 +
ChrX	stalkie_big_nohaplotig	CDS	42673593	42673746	100	-	2	ID=FBgn0014396.1.mrna1.cds9;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 2823 2976 +
ChrX	stalkie_big_nohaplotig	CDS	42673377	42673520	100	-	0	ID=FBgn0014396.1.mrna1.cds10;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 2977 3120 +
ChrX	stalkie_big_nohaplotig	CDS	42671672	42671846	100	-	0	ID=FBgn0014396.1.mrna1.cds11;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 3121 3295 +
ChrX	stalkie_big_nohaplotig	CDS	42671202	42671402	100	-	1	ID=FBgn0014396.1.mrna1.cds12;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 3296 3496 +
ChrX	stalkie_big_nohaplotig	CDS	42670838	42671120	100	-	1	ID=FBgn0014396.1.mrna1.cds13;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 3497 3779 +
ChrX	stalkie_big_nohaplotig	CDS	42669162	42669290	100	-	2	ID=FBgn0014396.1.mrna1.cds14;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 3780 3908 +
ChrX	stalkie_big_nohaplotig	CDS	42655547	42656116	99	-	2	ID=FBgn0014396.1.mrna1.cds15;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 3909 4478 +
ChrX	stalkie_big_nohaplotig	CDS	42646901	42646991	100	-	2	ID=FBgn0014396.1.mrna1.cds16;Name=FBgn0014396.1;Parent=FBgn0014396.1.mrna1;Target=FBgn0014396.1 4479 4569 +
Chr1	stalkie_big_nohaplotig	mRNA	31846076	31862536	.	-	.	ID=FBgn0263973.1.mrna1;Name=FBgn0263973.1;Parent=FBgn0263973.1.path1;Dir=sensecoverage=100.0;identity=99.1;matches=6193;mismatches=47;indels=9;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	31862167	31862536	99	-	.	ID=FBgn0263973.1.mrna1.exon1;Name=FBgn0263973.1;Parent=FBgn0263973.1.mrna1;Target=FBgn0263973.1 1 370 +
Chr1	stalkie_big_nohaplotig	exon	31861644	31861893	98	-	.	ID=FBgn0263973.1.mrna1.exon2;Name=FBgn0263973.1;Parent=FBgn0263973.1.mrna1;Target=FBgn0263973.1 371 620 +
Chr1	stalkie_big_nohaplotig	exon	31848744	31853373	98	-	.	ID=FBgn0263973.1.mrna1.exon3;Name=FBgn0263973.1;Parent=FBgn0263973.1.mrna1;Target=FBgn0263973.1 621 5247 +
Chr1	stalkie_big_nohaplotig	exon	31846803	31847184	99	-	.	ID=FBgn0263973.1.mrna1.exon4;Name=FBgn0263973.1;Parent=FBgn0263973.1.mrna1;Target=FBgn0263973.1 5248 5629 +
Chr1	stalkie_big_nohaplotig	exon	31846076	31846689	99	-	.	ID=FBgn0263973.1.mrna1.exon5;Name=FBgn0263973.1;Parent=FBgn0263973.1.mrna1;Target=FBgn0263973.1 5630 6243 +
Chr1	stalkie_big_nohaplotig	CDS	31862167	31862536	99	-	0	ID=FBgn0263973.1.mrna1.cds1;Name=FBgn0263973.1;Parent=FBgn0263973.1.mrna1;Target=FBgn0263973.1 1 370 +
Chr1	stalkie_big_nohaplotig	CDS	31861644	31861893	98	-	1	ID=FBgn0263973.1.mrna1.cds2;Name=FBgn0263973.1;Parent=FBgn0263973.1.mrna1;Target=FBgn0263973.1 371 620 +
Chr1	stalkie_big_nohaplotig	CDS	31848744	31853373	98	-	2	ID=FBgn0263973.1.mrna1.cds3;Name=FBgn0263973.1;Parent=FBgn0263973.1.mrna1;Target=FBgn0263973.1 621 5247 +
Chr1	stalkie_big_nohaplotig	CDS	31846803	31847184	99	-	0	ID=FBgn0263973.1.mrna1.cds4;Name=FBgn0263973.1;Parent=FBgn0263973.1.mrna1;Target=FBgn0263973.1 5248 5629 +
Chr1	stalkie_big_nohaplotig	CDS	31846076	31846689	99	-	1	ID=FBgn0263973.1.mrna1.cds5;Name=FBgn0263973.1;Parent=FBgn0263973.1.mrna1;Target=FBgn0263973.1 5630 6243 +
Chr1	stalkie_big_nohaplotig	mRNA	32435431	32442521	.	+	.	ID=FBgn0036560.1.mrna1;Name=FBgn0036560.1;Parent=FBgn0036560.1.path1;Dir=sensecoverage=96.4;identity=99.2;matches=1380;mismatches=11;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	32435431	32435520	100	+	.	ID=FBgn0036560.1.mrna1.exon1;Name=FBgn0036560.1;Parent=FBgn0036560.1.mrna1;Target=FBgn0036560.1 53 142 +
Chr1	stalkie_big_nohaplotig	exon	32435577	32435987	98	+	.	ID=FBgn0036560.1.mrna1.exon2;Name=FBgn0036560.1;Parent=FBgn0036560.1.mrna1;Target=FBgn0036560.1 143 553 +
Chr1	stalkie_big_nohaplotig	exon	32436059	32436197	100	+	.	ID=FBgn0036560.1.mrna1.exon3;Name=FBgn0036560.1;Parent=FBgn0036560.1.mrna1;Target=FBgn0036560.1 554 692 +
Chr1	stalkie_big_nohaplotig	exon	32437580	32437743	98	+	.	ID=FBgn0036560.1.mrna1.exon4;Name=FBgn0036560.1;Parent=FBgn0036560.1.mrna1;Target=FBgn0036560.1 693 856 +
Chr1	stalkie_big_nohaplotig	exon	32441797	32441985	100	+	.	ID=FBgn0036560.1.mrna1.exon5;Name=FBgn0036560.1;Parent=FBgn0036560.1.mrna1;Target=FBgn0036560.1 857 1045 +
Chr1	stalkie_big_nohaplotig	exon	32442057	32442220	98	+	.	ID=FBgn0036560.1.mrna1.exon6;Name=FBgn0036560.1;Parent=FBgn0036560.1.mrna1;Target=FBgn0036560.1 1046 1209 +
Chr1	stalkie_big_nohaplotig	exon	32442288	32442521	99	+	.	ID=FBgn0036560.1.mrna1.exon7;Name=FBgn0036560.1;Parent=FBgn0036560.1.mrna1;Target=FBgn0036560.1 1210 1443 +
Chr1	stalkie_big_nohaplotig	CDS	32435433	32435520	100	+	0	ID=FBgn0036560.1.mrna1.cds1;Name=FBgn0036560.1;Parent=FBgn0036560.1.mrna1;Target=FBgn0036560.1 55 142 +
Chr1	stalkie_big_nohaplotig	CDS	32435577	32435987	98	+	1	ID=FBgn0036560.1.mrna1.cds2;Name=FBgn0036560.1;Parent=FBgn0036560.1.mrna1;Target=FBgn0036560.1 143 553 +
Chr1	stalkie_big_nohaplotig	CDS	32436059	32436197	100	+	1	ID=FBgn0036560.1.mrna1.cds3;Name=FBgn0036560.1;Parent=FBgn0036560.1.mrna1;Target=FBgn0036560.1 554 692 +
Chr1	stalkie_big_nohaplotig	CDS	32437580	32437743	98	+	2	ID=FBgn0036560.1.mrna1.cds4;Name=FBgn0036560.1;Parent=FBgn0036560.1.mrna1;Target=FBgn0036560.1 693 856 +
Chr1	stalkie_big_nohaplotig	CDS	32441797	32441985	100	+	1	ID=FBgn0036560.1.mrna1.cds5;Name=FBgn0036560.1;Parent=FBgn0036560.1.mrna1;Target=FBgn0036560.1 857 1045 +
Chr1	stalkie_big_nohaplotig	CDS	32442057	32442220	98	+	1	ID=FBgn0036560.1.mrna1.cds6;Name=FBgn0036560.1;Parent=FBgn0036560.1.mrna1;Target=FBgn0036560.1 1046 1209 +
Chr1	stalkie_big_nohaplotig	CDS	32442288	32442521	99	+	0	ID=FBgn0036560.1.mrna1.cds7;Name=FBgn0036560.1;Parent=FBgn0036560.1.mrna1;Target=FBgn0036560.1 1210 1443 +
Chr2	stalkie_big_nohaplotig	mRNA	140857651	140860636	.	+	.	ID=FBgn0004903.1.mrna1;Name=FBgn0004903.1;Parent=FBgn0004903.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1434;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	140857651	140857770	100	+	.	ID=FBgn0004903.1.mrna1.exon1;Name=FBgn0004903.1;Parent=FBgn0004903.1.mrna1;Target=FBgn0004903.1 1 120 +
Chr2	stalkie_big_nohaplotig	exon	140857842	140858071	100	+	.	ID=FBgn0004903.1.mrna1.exon2;Name=FBgn0004903.1;Parent=FBgn0004903.1.mrna1;Target=FBgn0004903.1 121 350 +
Chr2	stalkie_big_nohaplotig	exon	140858130	140858374	100	+	.	ID=FBgn0004903.1.mrna1.exon3;Name=FBgn0004903.1;Parent=FBgn0004903.1.mrna1;Target=FBgn0004903.1 351 595 +
Chr2	stalkie_big_nohaplotig	exon	140859740	140860426	100	+	.	ID=FBgn0004903.1.mrna1.exon4;Name=FBgn0004903.1;Parent=FBgn0004903.1.mrna1;Target=FBgn0004903.1 596 1282 +
Chr2	stalkie_big_nohaplotig	exon	140860485	140860636	100	+	.	ID=FBgn0004903.1.mrna1.exon5;Name=FBgn0004903.1;Parent=FBgn0004903.1.mrna1;Target=FBgn0004903.1 1283 1434 +
Chr2	stalkie_big_nohaplotig	CDS	140857651	140857770	100	+	0	ID=FBgn0004903.1.mrna1.cds1;Name=FBgn0004903.1;Parent=FBgn0004903.1.mrna1;Target=FBgn0004903.1 1 120 +
Chr2	stalkie_big_nohaplotig	CDS	140857842	140858071	100	+	0	ID=FBgn0004903.1.mrna1.cds2;Name=FBgn0004903.1;Parent=FBgn0004903.1.mrna1;Target=FBgn0004903.1 121 350 +
Chr2	stalkie_big_nohaplotig	CDS	140858130	140858374	100	+	2	ID=FBgn0004903.1.mrna1.cds3;Name=FBgn0004903.1;Parent=FBgn0004903.1.mrna1;Target=FBgn0004903.1 351 595 +
Chr2	stalkie_big_nohaplotig	CDS	140859740	140860426	100	+	1	ID=FBgn0004903.1.mrna1.cds4;Name=FBgn0004903.1;Parent=FBgn0004903.1.mrna1;Target=FBgn0004903.1 596 1282 +
Chr2	stalkie_big_nohaplotig	CDS	140860485	140860636	100	+	1	ID=FBgn0004903.1.mrna1.cds5;Name=FBgn0004903.1;Parent=FBgn0004903.1.mrna1;Target=FBgn0004903.1 1283 1434 +
Chr2	stalkie_big_nohaplotig	mRNA	83690217	83693676	.	+	.	ID=FBgn0002441.mrna1;Name=FBgn0002441;Parent=FBgn0002441.path1;Dir=sensecoverage=100.0;identity=99.5;matches=2569;mismatches=14;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	83690217	83690997	99	+	.	ID=FBgn0002441.mrna1.exon1;Name=FBgn0002441;Parent=FBgn0002441.mrna1;Target=FBgn0002441 1 781 +
Chr2	stalkie_big_nohaplotig	exon	83691807	83692378	99	+	.	ID=FBgn0002441.mrna1.exon2;Name=FBgn0002441;Parent=FBgn0002441.mrna1;Target=FBgn0002441 782 1353 +
Chr2	stalkie_big_nohaplotig	exon	83692447	83693676	99	+	.	ID=FBgn0002441.mrna1.exon3;Name=FBgn0002441;Parent=FBgn0002441.mrna1;Target=FBgn0002441 1354 2583 +
Chr2	stalkie_big_nohaplotig	CDS	83690217	83690997	99	+	0	ID=FBgn0002441.mrna1.cds1;Name=FBgn0002441;Parent=FBgn0002441.mrna1;Target=FBgn0002441 1 781 +
Chr2	stalkie_big_nohaplotig	CDS	83691807	83692378	99	+	1	ID=FBgn0002441.mrna1.cds2;Name=FBgn0002441;Parent=FBgn0002441.mrna1;Target=FBgn0002441 782 1353 +
Chr2	stalkie_big_nohaplotig	CDS	83692447	83693676	99	+	0	ID=FBgn0002441.mrna1.cds3;Name=FBgn0002441;Parent=FBgn0002441.mrna1;Target=FBgn0002441 1354 2583 +
Chr2	stalkie_big_nohaplotig	mRNA	83762505	83778021	.	+	.	ID=FBgn0039863.1.mrna1;Name=FBgn0039863.1;Parent=FBgn0039863.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=4966;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	83762505	83762579	100	+	.	ID=FBgn0039863.1.mrna1.exon1;Name=FBgn0039863.1;Parent=FBgn0039863.1.mrna1;Target=FBgn0039863.1 1 75 +
Chr2	stalkie_big_nohaplotig	exon	83765228	83765479	100	+	.	ID=FBgn0039863.1.mrna1.exon2;Name=FBgn0039863.1;Parent=FBgn0039863.1.mrna1;Target=FBgn0039863.1 76 327 +
Chr2	stalkie_big_nohaplotig	exon	83766307	83766334	100	+	.	ID=FBgn0039863.1.mrna1.exon3;Name=FBgn0039863.1;Parent=FBgn0039863.1.mrna1;Target=FBgn0039863.1 328 355 +
Chr2	stalkie_big_nohaplotig	exon	83766409	83767433	99	+	.	ID=FBgn0039863.1.mrna1.exon4;Name=FBgn0039863.1;Parent=FBgn0039863.1.mrna1;Target=FBgn0039863.1 356 1380 +
Chr2	stalkie_big_nohaplotig	exon	83767686	83767864	100	+	.	ID=FBgn0039863.1.mrna1.exon5;Name=FBgn0039863.1;Parent=FBgn0039863.1.mrna1;Target=FBgn0039863.1 1381 1559 +
Chr2	stalkie_big_nohaplotig	exon	83767928	83768009	100	+	.	ID=FBgn0039863.1.mrna1.exon6;Name=FBgn0039863.1;Parent=FBgn0039863.1.mrna1;Target=FBgn0039863.1 1560 1641 +
Chr2	stalkie_big_nohaplotig	exon	83774575	83774743	100	+	.	ID=FBgn0039863.1.mrna1.exon7;Name=FBgn0039863.1;Parent=FBgn0039863.1.mrna1;Target=FBgn0039863.1 1642 1810 +
Chr2	stalkie_big_nohaplotig	exon	83774804	83777508	100	+	.	ID=FBgn0039863.1.mrna1.exon8;Name=FBgn0039863.1;Parent=FBgn0039863.1.mrna1;Target=FBgn0039863.1 1811 4515 +
Chr2	stalkie_big_nohaplotig	exon	83777569	83778021	100	+	.	ID=FBgn0039863.1.mrna1.exon9;Name=FBgn0039863.1;Parent=FBgn0039863.1.mrna1;Target=FBgn0039863.1 4516 4968 +
Chr2	stalkie_big_nohaplotig	CDS	83762505	83762579	100	+	0	ID=FBgn0039863.1.mrna1.cds1;Name=FBgn0039863.1;Parent=FBgn0039863.1.mrna1;Target=FBgn0039863.1 1 75 +
Chr2	stalkie_big_nohaplotig	CDS	83765228	83765479	100	+	0	ID=FBgn0039863.1.mrna1.cds2;Name=FBgn0039863.1;Parent=FBgn0039863.1.mrna1;Target=FBgn0039863.1 76 327 +
Chr2	stalkie_big_nohaplotig	CDS	83766307	83766334	100	+	0	ID=FBgn0039863.1.mrna1.cds3;Name=FBgn0039863.1;Parent=FBgn0039863.1.mrna1;Target=FBgn0039863.1 328 355 +
Chr2	stalkie_big_nohaplotig	CDS	83766409	83767433	99	+	1	ID=FBgn0039863.1.mrna1.cds4;Name=FBgn0039863.1;Parent=FBgn0039863.1.mrna1;Target=FBgn0039863.1 356 1380 +
Chr2	stalkie_big_nohaplotig	CDS	83767686	83767864	100	+	0	ID=FBgn0039863.1.mrna1.cds5;Name=FBgn0039863.1;Parent=FBgn0039863.1.mrna1;Target=FBgn0039863.1 1381 1559 +
Chr2	stalkie_big_nohaplotig	CDS	83767928	83768009	100	+	2	ID=FBgn0039863.1.mrna1.cds6;Name=FBgn0039863.1;Parent=FBgn0039863.1.mrna1;Target=FBgn0039863.1 1560 1641 +
Chr2	stalkie_big_nohaplotig	CDS	83774575	83774743	100	+	0	ID=FBgn0039863.1.mrna1.cds7;Name=FBgn0039863.1;Parent=FBgn0039863.1.mrna1;Target=FBgn0039863.1 1642 1810 +
Chr2	stalkie_big_nohaplotig	CDS	83774804	83777508	100	+	1	ID=FBgn0039863.1.mrna1.cds8;Name=FBgn0039863.1;Parent=FBgn0039863.1.mrna1;Target=FBgn0039863.1 1811 4515 +
Chr2	stalkie_big_nohaplotig	CDS	83777569	83778021	100	+	0	ID=FBgn0039863.1.mrna1.cds9;Name=FBgn0039863.1;Parent=FBgn0039863.1.mrna1;Target=FBgn0039863.1 4516 4968 +
Chr1	stalkie_big_nohaplotig	mRNA	58673038	58681241	.	-	.	ID=FBgn0000404.1.mrna1;Name=FBgn0000404.1;Parent=FBgn0000404.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1480;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	58681110	58681241	100	-	.	ID=FBgn0000404.1.mrna1.exon1;Name=FBgn0000404.1;Parent=FBgn0000404.1.mrna1;Target=FBgn0000404.1 1 132 +
Chr1	stalkie_big_nohaplotig	exon	58680421	58680656	99	-	.	ID=FBgn0000404.1.mrna1.exon2;Name=FBgn0000404.1;Parent=FBgn0000404.1.mrna1;Target=FBgn0000404.1 133 368 +
Chr1	stalkie_big_nohaplotig	exon	58680095	58680350	100	-	.	ID=FBgn0000404.1.mrna1.exon3;Name=FBgn0000404.1;Parent=FBgn0000404.1.mrna1;Target=FBgn0000404.1 369 624 +
Chr1	stalkie_big_nohaplotig	exon	58676533	58676756	100	-	.	ID=FBgn0000404.1.mrna1.exon4;Name=FBgn0000404.1;Parent=FBgn0000404.1.mrna1;Target=FBgn0000404.1 625 848 +
Chr1	stalkie_big_nohaplotig	exon	58675669	58675873	100	-	.	ID=FBgn0000404.1.mrna1.exon5;Name=FBgn0000404.1;Parent=FBgn0000404.1.mrna1;Target=FBgn0000404.1 849 1053 +
Chr1	stalkie_big_nohaplotig	exon	58673281	58673528	100	-	.	ID=FBgn0000404.1.mrna1.exon6;Name=FBgn0000404.1;Parent=FBgn0000404.1.mrna1;Target=FBgn0000404.1 1054 1301 +
Chr1	stalkie_big_nohaplotig	exon	58673038	58673218	100	-	.	ID=FBgn0000404.1.mrna1.exon7;Name=FBgn0000404.1;Parent=FBgn0000404.1.mrna1;Target=FBgn0000404.1 1302 1482 +
Chr1	stalkie_big_nohaplotig	CDS	58681110	58681241	100	-	0	ID=FBgn0000404.1.mrna1.cds1;Name=FBgn0000404.1;Parent=FBgn0000404.1.mrna1;Target=FBgn0000404.1 1 132 +
Chr1	stalkie_big_nohaplotig	CDS	58680421	58680656	99	-	0	ID=FBgn0000404.1.mrna1.cds2;Name=FBgn0000404.1;Parent=FBgn0000404.1.mrna1;Target=FBgn0000404.1 133 368 +
Chr1	stalkie_big_nohaplotig	CDS	58680095	58680350	100	-	2	ID=FBgn0000404.1.mrna1.cds3;Name=FBgn0000404.1;Parent=FBgn0000404.1.mrna1;Target=FBgn0000404.1 369 624 +
Chr1	stalkie_big_nohaplotig	CDS	58676533	58676756	100	-	0	ID=FBgn0000404.1.mrna1.cds4;Name=FBgn0000404.1;Parent=FBgn0000404.1.mrna1;Target=FBgn0000404.1 625 848 +
Chr1	stalkie_big_nohaplotig	CDS	58675669	58675873	100	-	2	ID=FBgn0000404.1.mrna1.cds5;Name=FBgn0000404.1;Parent=FBgn0000404.1.mrna1;Target=FBgn0000404.1 849 1053 +
Chr1	stalkie_big_nohaplotig	CDS	58673281	58673528	100	-	0	ID=FBgn0000404.1.mrna1.cds6;Name=FBgn0000404.1;Parent=FBgn0000404.1.mrna1;Target=FBgn0000404.1 1054 1301 +
Chr1	stalkie_big_nohaplotig	CDS	58673038	58673218	100	-	2	ID=FBgn0000404.1.mrna1.cds7;Name=FBgn0000404.1;Parent=FBgn0000404.1.mrna1;Target=FBgn0000404.1 1302 1482 +
Chr1	stalkie_big_nohaplotig	mRNA	32159552	32266331	.	+	.	ID=FBgn0040823.1.mrna1;Name=FBgn0040823.1;Parent=FBgn0040823.1.path1;Dir=sensecoverage=88.1;identity=99.6;matches=897;mismatches=2;indels=2;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	32159552	32159721	98	+	.	ID=FBgn0040823.1.mrna1.exon1;Name=FBgn0040823.1;Parent=FBgn0040823.1.mrna1;Target=FBgn0040823.1 1 172 +
Chr1	stalkie_big_nohaplotig	exon	32237752	32237972	100	+	.	ID=FBgn0040823.1.mrna1.exon2;Name=FBgn0040823.1;Parent=FBgn0040823.1.mrna1;Target=FBgn0040823.1 173 393 +
Chr1	stalkie_big_nohaplotig	exon	32248629	32248839	99	+	.	ID=FBgn0040823.1.mrna1.exon3;Name=FBgn0040823.1;Parent=FBgn0040823.1.mrna1;Target=FBgn0040823.1 394 604 +
Chr1	stalkie_big_nohaplotig	exon	32249524	32249651	100	+	.	ID=FBgn0040823.1.mrna1.exon4;Name=FBgn0040823.1;Parent=FBgn0040823.1.mrna1;Target=FBgn0040823.1 605 732 +
Chr1	stalkie_big_nohaplotig	exon	32266163	32266331	100	+	.	ID=FBgn0040823.1.mrna1.exon5;Name=FBgn0040823.1;Parent=FBgn0040823.1.mrna1;Target=FBgn0040823.1 733 901 +
Chr1	stalkie_big_nohaplotig	CDS	32159553	32159604	96	+	0	ID=FBgn0040823.1.mrna1.cds1;Name=FBgn0040823.1;Parent=FBgn0040823.1.mrna1;Target=FBgn0040823.1 2 55 +
Chr2	stalkie_big_nohaplotig	mRNA	123774175	123777467	.	+	.	ID=FBgn0038966.1.mrna1;Name=FBgn0038966.1;Parent=FBgn0038966.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=834;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	123774175	123774386	100	+	.	ID=FBgn0038966.1.mrna1.exon1;Name=FBgn0038966.1;Parent=FBgn0038966.1.mrna1;Target=FBgn0038966.1 1 212 +
Chr2	stalkie_big_nohaplotig	exon	123776700	123776892	100	+	.	ID=FBgn0038966.1.mrna1.exon2;Name=FBgn0038966.1;Parent=FBgn0038966.1.mrna1;Target=FBgn0038966.1 213 405 +
Chr2	stalkie_big_nohaplotig	exon	123776969	123777198	100	+	.	ID=FBgn0038966.1.mrna1.exon3;Name=FBgn0038966.1;Parent=FBgn0038966.1.mrna1;Target=FBgn0038966.1 406 635 +
Chr2	stalkie_big_nohaplotig	exon	123777269	123777467	100	+	.	ID=FBgn0038966.1.mrna1.exon4;Name=FBgn0038966.1;Parent=FBgn0038966.1.mrna1;Target=FBgn0038966.1 636 834 +
Chr2	stalkie_big_nohaplotig	CDS	123774175	123774386	100	+	0	ID=FBgn0038966.1.mrna1.cds1;Name=FBgn0038966.1;Parent=FBgn0038966.1.mrna1;Target=FBgn0038966.1 1 212 +
Chr2	stalkie_big_nohaplotig	CDS	123776700	123776892	100	+	2	ID=FBgn0038966.1.mrna1.cds2;Name=FBgn0038966.1;Parent=FBgn0038966.1.mrna1;Target=FBgn0038966.1 213 405 +
Chr2	stalkie_big_nohaplotig	CDS	123776969	123777198	100	+	0	ID=FBgn0038966.1.mrna1.cds3;Name=FBgn0038966.1;Parent=FBgn0038966.1.mrna1;Target=FBgn0038966.1 406 635 +
Chr2	stalkie_big_nohaplotig	CDS	123777269	123777467	100	+	2	ID=FBgn0038966.1.mrna1.cds4;Name=FBgn0038966.1;Parent=FBgn0038966.1.mrna1;Target=FBgn0038966.1 636 834 +
Chr2	stalkie_big_nohaplotig	mRNA	124304305	124331867	.	+	.	ID=FBgn0085412.1.mrna1;Name=FBgn0085412.1;Parent=FBgn0085412.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=4868;mismatches=4;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	124304305	124305837	99	+	.	ID=FBgn0085412.1.mrna1.exon1;Name=FBgn0085412.1;Parent=FBgn0085412.1.mrna1;Target=FBgn0085412.1 1 1533 +
Chr2	stalkie_big_nohaplotig	exon	124310721	124311801	100	+	.	ID=FBgn0085412.1.mrna1.exon2;Name=FBgn0085412.1;Parent=FBgn0085412.1.mrna1;Target=FBgn0085412.1 1534 2614 +
Chr2	stalkie_big_nohaplotig	exon	124326341	124326774	100	+	.	ID=FBgn0085412.1.mrna1.exon3;Name=FBgn0085412.1;Parent=FBgn0085412.1.mrna1;Target=FBgn0085412.1 2615 3048 +
Chr2	stalkie_big_nohaplotig	exon	124327291	124327428	100	+	.	ID=FBgn0085412.1.mrna1.exon4;Name=FBgn0085412.1;Parent=FBgn0085412.1.mrna1;Target=FBgn0085412.1 3049 3186 +
Chr2	stalkie_big_nohaplotig	exon	124328866	124329171	100	+	.	ID=FBgn0085412.1.mrna1.exon5;Name=FBgn0085412.1;Parent=FBgn0085412.1.mrna1;Target=FBgn0085412.1 3187 3492 +
Chr2	stalkie_big_nohaplotig	exon	124329238	124329468	100	+	.	ID=FBgn0085412.1.mrna1.exon6;Name=FBgn0085412.1;Parent=FBgn0085412.1.mrna1;Target=FBgn0085412.1 3493 3723 +
Chr2	stalkie_big_nohaplotig	exon	124330719	124331867	99	+	.	ID=FBgn0085412.1.mrna1.exon7;Name=FBgn0085412.1;Parent=FBgn0085412.1.mrna1;Target=FBgn0085412.1 3724 4872 +
Chr2	stalkie_big_nohaplotig	CDS	124304305	124305837	99	+	0	ID=FBgn0085412.1.mrna1.cds1;Name=FBgn0085412.1;Parent=FBgn0085412.1.mrna1;Target=FBgn0085412.1 1 1533 +
Chr2	stalkie_big_nohaplotig	CDS	124310721	124311801	100	+	0	ID=FBgn0085412.1.mrna1.cds2;Name=FBgn0085412.1;Parent=FBgn0085412.1.mrna1;Target=FBgn0085412.1 1534 2614 +
Chr2	stalkie_big_nohaplotig	CDS	124326341	124326774	100	+	1	ID=FBgn0085412.1.mrna1.cds3;Name=FBgn0085412.1;Parent=FBgn0085412.1.mrna1;Target=FBgn0085412.1 2615 3048 +
Chr2	stalkie_big_nohaplotig	CDS	124327291	124327428	100	+	0	ID=FBgn0085412.1.mrna1.cds4;Name=FBgn0085412.1;Parent=FBgn0085412.1.mrna1;Target=FBgn0085412.1 3049 3186 +
Chr2	stalkie_big_nohaplotig	CDS	124328866	124329171	100	+	0	ID=FBgn0085412.1.mrna1.cds5;Name=FBgn0085412.1;Parent=FBgn0085412.1.mrna1;Target=FBgn0085412.1 3187 3492 +
Chr2	stalkie_big_nohaplotig	CDS	124329238	124329468	100	+	0	ID=FBgn0085412.1.mrna1.cds6;Name=FBgn0085412.1;Parent=FBgn0085412.1.mrna1;Target=FBgn0085412.1 3493 3723 +
Chr2	stalkie_big_nohaplotig	CDS	124330719	124331867	99	+	0	ID=FBgn0085412.1.mrna1.cds7;Name=FBgn0085412.1;Parent=FBgn0085412.1.mrna1;Target=FBgn0085412.1 3724 4872 +
Chr2	stalkie_big_nohaplotig	mRNA	124086854	124091225	.	+	.	ID=FBgn0024555.1.mrna1;Name=FBgn0024555.1;Parent=FBgn0024555.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2289;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	124086854	124087492	100	+	.	ID=FBgn0024555.1.mrna1.exon1;Name=FBgn0024555.1;Parent=FBgn0024555.1.mrna1;Target=FBgn0024555.1 1 639 +
Chr2	stalkie_big_nohaplotig	exon	124087554	124087731	100	+	.	ID=FBgn0024555.1.mrna1.exon2;Name=FBgn0024555.1;Parent=FBgn0024555.1.mrna1;Target=FBgn0024555.1 640 817 +
Chr2	stalkie_big_nohaplotig	exon	124087794	124088049	100	+	.	ID=FBgn0024555.1.mrna1.exon3;Name=FBgn0024555.1;Parent=FBgn0024555.1.mrna1;Target=FBgn0024555.1 818 1073 +
Chr2	stalkie_big_nohaplotig	exon	124089215	124089481	100	+	.	ID=FBgn0024555.1.mrna1.exon4;Name=FBgn0024555.1;Parent=FBgn0024555.1.mrna1;Target=FBgn0024555.1 1074 1340 +
Chr2	stalkie_big_nohaplotig	exon	124089548	124089684	100	+	.	ID=FBgn0024555.1.mrna1.exon5;Name=FBgn0024555.1;Parent=FBgn0024555.1.mrna1;Target=FBgn0024555.1 1341 1477 +
Chr2	stalkie_big_nohaplotig	exon	124090355	124091073	100	+	.	ID=FBgn0024555.1.mrna1.exon6;Name=FBgn0024555.1;Parent=FBgn0024555.1.mrna1;Target=FBgn0024555.1 1478 2196 +
Chr2	stalkie_big_nohaplotig	exon	124091133	124091225	100	+	.	ID=FBgn0024555.1.mrna1.exon7;Name=FBgn0024555.1;Parent=FBgn0024555.1.mrna1;Target=FBgn0024555.1 2197 2289 +
Chr2	stalkie_big_nohaplotig	CDS	124086854	124087492	100	+	0	ID=FBgn0024555.1.mrna1.cds1;Name=FBgn0024555.1;Parent=FBgn0024555.1.mrna1;Target=FBgn0024555.1 1 639 +
Chr2	stalkie_big_nohaplotig	CDS	124087554	124087731	100	+	0	ID=FBgn0024555.1.mrna1.cds2;Name=FBgn0024555.1;Parent=FBgn0024555.1.mrna1;Target=FBgn0024555.1 640 817 +
Chr2	stalkie_big_nohaplotig	CDS	124087794	124088049	100	+	1	ID=FBgn0024555.1.mrna1.cds3;Name=FBgn0024555.1;Parent=FBgn0024555.1.mrna1;Target=FBgn0024555.1 818 1073 +
Chr2	stalkie_big_nohaplotig	CDS	124089215	124089481	100	+	2	ID=FBgn0024555.1.mrna1.cds4;Name=FBgn0024555.1;Parent=FBgn0024555.1.mrna1;Target=FBgn0024555.1 1074 1340 +
Chr2	stalkie_big_nohaplotig	CDS	124089548	124089684	100	+	2	ID=FBgn0024555.1.mrna1.cds5;Name=FBgn0024555.1;Parent=FBgn0024555.1.mrna1;Target=FBgn0024555.1 1341 1477 +
Chr2	stalkie_big_nohaplotig	CDS	124090355	124091073	100	+	1	ID=FBgn0024555.1.mrna1.cds6;Name=FBgn0024555.1;Parent=FBgn0024555.1.mrna1;Target=FBgn0024555.1 1478 2196 +
Chr2	stalkie_big_nohaplotig	CDS	124091133	124091225	100	+	0	ID=FBgn0024555.1.mrna1.cds7;Name=FBgn0024555.1;Parent=FBgn0024555.1.mrna1;Target=FBgn0024555.1 2197 2289 +
Chr2	stalkie_big_nohaplotig	mRNA	124029040	124033054	.	+	.	ID=FBgn0037537.1.mrna1;Name=FBgn0037537.1;Parent=FBgn0037537.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=876;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	124029040	124029120	100	+	.	ID=FBgn0037537.1.mrna1.exon1;Name=FBgn0037537.1;Parent=FBgn0037537.1.mrna1;Target=FBgn0037537.1 1 81 +
Chr2	stalkie_big_nohaplotig	exon	124032084	124032264	100	+	.	ID=FBgn0037537.1.mrna1.exon2;Name=FBgn0037537.1;Parent=FBgn0037537.1.mrna1;Target=FBgn0037537.1 82 262 +
Chr2	stalkie_big_nohaplotig	exon	124032324	124032508	100	+	.	ID=FBgn0037537.1.mrna1.exon3;Name=FBgn0037537.1;Parent=FBgn0037537.1.mrna1;Target=FBgn0037537.1 263 447 +
Chr2	stalkie_big_nohaplotig	exon	124032563	124032679	100	+	.	ID=FBgn0037537.1.mrna1.exon4;Name=FBgn0037537.1;Parent=FBgn0037537.1.mrna1;Target=FBgn0037537.1 448 564 +
Chr2	stalkie_big_nohaplotig	exon	124032743	124033054	100	+	.	ID=FBgn0037537.1.mrna1.exon5;Name=FBgn0037537.1;Parent=FBgn0037537.1.mrna1;Target=FBgn0037537.1 565 876 +
Chr2	stalkie_big_nohaplotig	CDS	124029040	124029120	100	+	0	ID=FBgn0037537.1.mrna1.cds1;Name=FBgn0037537.1;Parent=FBgn0037537.1.mrna1;Target=FBgn0037537.1 1 81 +
Chr2	stalkie_big_nohaplotig	CDS	124032084	124032264	100	+	0	ID=FBgn0037537.1.mrna1.cds2;Name=FBgn0037537.1;Parent=FBgn0037537.1.mrna1;Target=FBgn0037537.1 82 262 +
Chr2	stalkie_big_nohaplotig	CDS	124032324	124032508	100	+	1	ID=FBgn0037537.1.mrna1.cds3;Name=FBgn0037537.1;Parent=FBgn0037537.1.mrna1;Target=FBgn0037537.1 263 447 +
Chr2	stalkie_big_nohaplotig	CDS	124032563	124032679	100	+	0	ID=FBgn0037537.1.mrna1.cds4;Name=FBgn0037537.1;Parent=FBgn0037537.1.mrna1;Target=FBgn0037537.1 448 564 +
Chr2	stalkie_big_nohaplotig	CDS	124032743	124033054	100	+	0	ID=FBgn0037537.1.mrna1.cds5;Name=FBgn0037537.1;Parent=FBgn0037537.1.mrna1;Target=FBgn0037537.1 565 876 +
ChrX	stalkie_big_nohaplotig	mRNA	25224356	25235665	.	+	.	ID=FBgn0010660.1.mrna1;Name=FBgn0010660.1;Parent=FBgn0010660.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=5507;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	25224356	25224397	100	+	.	ID=FBgn0010660.1.mrna1.exon1;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 1 42 +
ChrX	stalkie_big_nohaplotig	exon	25224456	25224597	100	+	.	ID=FBgn0010660.1.mrna1.exon2;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 43 184 +
ChrX	stalkie_big_nohaplotig	exon	25224706	25224893	100	+	.	ID=FBgn0010660.1.mrna1.exon3;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 185 372 +
ChrX	stalkie_big_nohaplotig	exon	25226467	25227579	100	+	.	ID=FBgn0010660.1.mrna1.exon4;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 373 1485 +
ChrX	stalkie_big_nohaplotig	exon	25227639	25227762	100	+	.	ID=FBgn0010660.1.mrna1.exon5;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 1486 1609 +
ChrX	stalkie_big_nohaplotig	exon	25228757	25229034	100	+	.	ID=FBgn0010660.1.mrna1.exon6;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 1610 1887 +
ChrX	stalkie_big_nohaplotig	exon	25229552	25229733	100	+	.	ID=FBgn0010660.1.mrna1.exon7;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 1888 2069 +
ChrX	stalkie_big_nohaplotig	exon	25229796	25230143	99	+	.	ID=FBgn0010660.1.mrna1.exon8;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 2070 2417 +
ChrX	stalkie_big_nohaplotig	exon	25231245	25232200	100	+	.	ID=FBgn0010660.1.mrna1.exon9;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 2418 3373 +
ChrX	stalkie_big_nohaplotig	exon	25232504	25232648	100	+	.	ID=FBgn0010660.1.mrna1.exon10;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 3374 3518 +
ChrX	stalkie_big_nohaplotig	exon	25232736	25232857	100	+	.	ID=FBgn0010660.1.mrna1.exon11;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 3519 3640 +
ChrX	stalkie_big_nohaplotig	exon	25233729	25235571	100	+	.	ID=FBgn0010660.1.mrna1.exon12;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 3641 5483 +
ChrX	stalkie_big_nohaplotig	exon	25235641	25235665	100	+	.	ID=FBgn0010660.1.mrna1.exon13;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 5484 5508 +
ChrX	stalkie_big_nohaplotig	CDS	25224356	25224397	100	+	0	ID=FBgn0010660.1.mrna1.cds1;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 1 42 +
ChrX	stalkie_big_nohaplotig	CDS	25224456	25224597	100	+	0	ID=FBgn0010660.1.mrna1.cds2;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 43 184 +
ChrX	stalkie_big_nohaplotig	CDS	25224706	25224893	100	+	1	ID=FBgn0010660.1.mrna1.cds3;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 185 372 +
ChrX	stalkie_big_nohaplotig	CDS	25226467	25227579	100	+	0	ID=FBgn0010660.1.mrna1.cds4;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 373 1485 +
ChrX	stalkie_big_nohaplotig	CDS	25227639	25227762	100	+	0	ID=FBgn0010660.1.mrna1.cds5;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 1486 1609 +
ChrX	stalkie_big_nohaplotig	CDS	25228757	25229034	100	+	1	ID=FBgn0010660.1.mrna1.cds6;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 1610 1887 +
ChrX	stalkie_big_nohaplotig	CDS	25229552	25229733	100	+	0	ID=FBgn0010660.1.mrna1.cds7;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 1888 2069 +
ChrX	stalkie_big_nohaplotig	CDS	25229796	25230143	99	+	2	ID=FBgn0010660.1.mrna1.cds8;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 2070 2417 +
ChrX	stalkie_big_nohaplotig	CDS	25231245	25232200	100	+	2	ID=FBgn0010660.1.mrna1.cds9;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 2418 3373 +
ChrX	stalkie_big_nohaplotig	CDS	25232504	25232648	100	+	1	ID=FBgn0010660.1.mrna1.cds10;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 3374 3518 +
ChrX	stalkie_big_nohaplotig	CDS	25232736	25232857	100	+	2	ID=FBgn0010660.1.mrna1.cds11;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 3519 3640 +
ChrX	stalkie_big_nohaplotig	CDS	25233729	25235571	100	+	1	ID=FBgn0010660.1.mrna1.cds12;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 3641 5483 +
ChrX	stalkie_big_nohaplotig	CDS	25235641	25235665	100	+	2	ID=FBgn0010660.1.mrna1.cds13;Name=FBgn0010660.1;Parent=FBgn0010660.1.mrna1;Target=FBgn0010660.1 5484 5508 +
ChrX	stalkie_big_nohaplotig	mRNA	25142141	25162563	.	-	.	ID=FBgn0031948.1.mrna1;Name=FBgn0031948.1;Parent=FBgn0031948.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1218;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	25162495	25162563	100	-	.	ID=FBgn0031948.1.mrna1.exon1;Name=FBgn0031948.1;Parent=FBgn0031948.1.mrna1;Target=FBgn0031948.1 1 69 +
ChrX	stalkie_big_nohaplotig	exon	25152811	25152879	100	-	.	ID=FBgn0031948.1.mrna1.exon2;Name=FBgn0031948.1;Parent=FBgn0031948.1.mrna1;Target=FBgn0031948.1 70 138 +
ChrX	stalkie_big_nohaplotig	exon	25150420	25150603	100	-	.	ID=FBgn0031948.1.mrna1.exon3;Name=FBgn0031948.1;Parent=FBgn0031948.1.mrna1;Target=FBgn0031948.1 139 322 +
ChrX	stalkie_big_nohaplotig	exon	25149575	25149831	100	-	.	ID=FBgn0031948.1.mrna1.exon4;Name=FBgn0031948.1;Parent=FBgn0031948.1.mrna1;Target=FBgn0031948.1 323 579 +
ChrX	stalkie_big_nohaplotig	exon	25149259	25149413	100	-	.	ID=FBgn0031948.1.mrna1.exon5;Name=FBgn0031948.1;Parent=FBgn0031948.1.mrna1;Target=FBgn0031948.1 580 734 +
ChrX	stalkie_big_nohaplotig	exon	25149006	25149186	100	-	.	ID=FBgn0031948.1.mrna1.exon6;Name=FBgn0031948.1;Parent=FBgn0031948.1.mrna1;Target=FBgn0031948.1 735 915 +
ChrX	stalkie_big_nohaplotig	exon	25145431	25145640	100	-	.	ID=FBgn0031948.1.mrna1.exon7;Name=FBgn0031948.1;Parent=FBgn0031948.1.mrna1;Target=FBgn0031948.1 916 1125 +
ChrX	stalkie_big_nohaplotig	exon	25145286	25145327	100	-	.	ID=FBgn0031948.1.mrna1.exon8;Name=FBgn0031948.1;Parent=FBgn0031948.1.mrna1;Target=FBgn0031948.1 1126 1167 +
ChrX	stalkie_big_nohaplotig	exon	25142141	25142191	100	-	.	ID=FBgn0031948.1.mrna1.exon9;Name=FBgn0031948.1;Parent=FBgn0031948.1.mrna1;Target=FBgn0031948.1 1168 1218 +
ChrX	stalkie_big_nohaplotig	CDS	25162495	25162563	100	-	0	ID=FBgn0031948.1.mrna1.cds1;Name=FBgn0031948.1;Parent=FBgn0031948.1.mrna1;Target=FBgn0031948.1 1 69 +
ChrX	stalkie_big_nohaplotig	CDS	25152811	25152879	100	-	0	ID=FBgn0031948.1.mrna1.cds2;Name=FBgn0031948.1;Parent=FBgn0031948.1.mrna1;Target=FBgn0031948.1 70 138 +
ChrX	stalkie_big_nohaplotig	CDS	25150420	25150603	100	-	0	ID=FBgn0031948.1.mrna1.cds3;Name=FBgn0031948.1;Parent=FBgn0031948.1.mrna1;Target=FBgn0031948.1 139 322 +
ChrX	stalkie_big_nohaplotig	CDS	25149575	25149831	100	-	1	ID=FBgn0031948.1.mrna1.cds4;Name=FBgn0031948.1;Parent=FBgn0031948.1.mrna1;Target=FBgn0031948.1 323 579 +
ChrX	stalkie_big_nohaplotig	CDS	25149259	25149413	100	-	0	ID=FBgn0031948.1.mrna1.cds5;Name=FBgn0031948.1;Parent=FBgn0031948.1.mrna1;Target=FBgn0031948.1 580 734 +
ChrX	stalkie_big_nohaplotig	CDS	25149006	25149186	100	-	2	ID=FBgn0031948.1.mrna1.cds6;Name=FBgn0031948.1;Parent=FBgn0031948.1.mrna1;Target=FBgn0031948.1 735 915 +
ChrX	stalkie_big_nohaplotig	CDS	25145431	25145640	100	-	0	ID=FBgn0031948.1.mrna1.cds7;Name=FBgn0031948.1;Parent=FBgn0031948.1.mrna1;Target=FBgn0031948.1 916 1125 +
ChrX	stalkie_big_nohaplotig	CDS	25145286	25145327	100	-	0	ID=FBgn0031948.1.mrna1.cds8;Name=FBgn0031948.1;Parent=FBgn0031948.1.mrna1;Target=FBgn0031948.1 1126 1167 +
ChrX	stalkie_big_nohaplotig	CDS	25142141	25142191	100	-	0	ID=FBgn0031948.1.mrna1.cds9;Name=FBgn0031948.1;Parent=FBgn0031948.1.mrna1;Target=FBgn0031948.1 1168 1218 +
ChrX	stalkie_big_nohaplotig	mRNA	25119897	25121428	.	-	.	ID=FBgn0031974.3.mrna1;Name=FBgn0031974.3;Parent=FBgn0031974.3.path1;Dir=sensecoverage=100.0;identity=100.0;matches=855;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	25121216	25121428	100	-	.	ID=FBgn0031974.3.mrna1.exon1;Name=FBgn0031974.3;Parent=FBgn0031974.3.mrna1;Target=FBgn0031974.3 1 213 +
ChrX	stalkie_big_nohaplotig	exon	25120906	25121147	100	-	.	ID=FBgn0031974.3.mrna1.exon2;Name=FBgn0031974.3;Parent=FBgn0031974.3.mrna1;Target=FBgn0031974.3 214 455 +
ChrX	stalkie_big_nohaplotig	exon	25120675	25120848	100	-	.	ID=FBgn0031974.3.mrna1.exon3;Name=FBgn0031974.3;Parent=FBgn0031974.3.mrna1;Target=FBgn0031974.3 456 629 +
ChrX	stalkie_big_nohaplotig	exon	25119897	25120122	100	-	.	ID=FBgn0031974.3.mrna1.exon4;Name=FBgn0031974.3;Parent=FBgn0031974.3.mrna1;Target=FBgn0031974.3 630 855 +
ChrX	stalkie_big_nohaplotig	CDS	25121216	25121428	100	-	0	ID=FBgn0031974.3.mrna1.cds1;Name=FBgn0031974.3;Parent=FBgn0031974.3.mrna1;Target=FBgn0031974.3 1 213 +
ChrX	stalkie_big_nohaplotig	CDS	25120906	25121147	100	-	0	ID=FBgn0031974.3.mrna1.cds2;Name=FBgn0031974.3;Parent=FBgn0031974.3.mrna1;Target=FBgn0031974.3 214 455 +
ChrX	stalkie_big_nohaplotig	CDS	25120675	25120848	100	-	2	ID=FBgn0031974.3.mrna1.cds3;Name=FBgn0031974.3;Parent=FBgn0031974.3.mrna1;Target=FBgn0031974.3 456 629 +
ChrX	stalkie_big_nohaplotig	CDS	25119897	25120122	100	-	2	ID=FBgn0031974.3.mrna1.cds4;Name=FBgn0031974.3;Parent=FBgn0031974.3.mrna1;Target=FBgn0031974.3 630 855 +
ChrX	stalkie_big_nohaplotig	mRNA	47399520	47431843	.	+	.	ID=FBgn0028540.1.mrna1;Name=FBgn0028540.1;Parent=FBgn0028540.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=957;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	47399520	47399673	100	+	.	ID=FBgn0028540.1.mrna1.exon1;Name=FBgn0028540.1;Parent=FBgn0028540.1.mrna1;Target=FBgn0028540.1 1 154 +
ChrX	stalkie_big_nohaplotig	exon	47413923	47413974	100	+	.	ID=FBgn0028540.1.mrna1.exon2;Name=FBgn0028540.1;Parent=FBgn0028540.1.mrna1;Target=FBgn0028540.1 155 206 +
ChrX	stalkie_big_nohaplotig	exon	47428411	47428469	100	+	.	ID=FBgn0028540.1.mrna1.exon3;Name=FBgn0028540.1;Parent=FBgn0028540.1.mrna1;Target=FBgn0028540.1 207 265 +
ChrX	stalkie_big_nohaplotig	exon	47428553	47428709	100	+	.	ID=FBgn0028540.1.mrna1.exon4;Name=FBgn0028540.1;Parent=FBgn0028540.1.mrna1;Target=FBgn0028540.1 266 422 +
ChrX	stalkie_big_nohaplotig	exon	47428769	47428949	100	+	.	ID=FBgn0028540.1.mrna1.exon5;Name=FBgn0028540.1;Parent=FBgn0028540.1.mrna1;Target=FBgn0028540.1 423 603 +
ChrX	stalkie_big_nohaplotig	exon	47429006	47429162	100	+	.	ID=FBgn0028540.1.mrna1.exon6;Name=FBgn0028540.1;Parent=FBgn0028540.1.mrna1;Target=FBgn0028540.1 604 760 +
ChrX	stalkie_big_nohaplotig	exon	47430215	47430366	100	+	.	ID=FBgn0028540.1.mrna1.exon7;Name=FBgn0028540.1;Parent=FBgn0028540.1.mrna1;Target=FBgn0028540.1 761 912 +
ChrX	stalkie_big_nohaplotig	exon	47431799	47431843	100	+	.	ID=FBgn0028540.1.mrna1.exon8;Name=FBgn0028540.1;Parent=FBgn0028540.1.mrna1;Target=FBgn0028540.1 913 957 +
ChrX	stalkie_big_nohaplotig	CDS	47399520	47399673	100	+	0	ID=FBgn0028540.1.mrna1.cds1;Name=FBgn0028540.1;Parent=FBgn0028540.1.mrna1;Target=FBgn0028540.1 1 154 +
ChrX	stalkie_big_nohaplotig	CDS	47413923	47413974	100	+	1	ID=FBgn0028540.1.mrna1.cds2;Name=FBgn0028540.1;Parent=FBgn0028540.1.mrna1;Target=FBgn0028540.1 155 206 +
ChrX	stalkie_big_nohaplotig	CDS	47428411	47428469	100	+	2	ID=FBgn0028540.1.mrna1.cds3;Name=FBgn0028540.1;Parent=FBgn0028540.1.mrna1;Target=FBgn0028540.1 207 265 +
ChrX	stalkie_big_nohaplotig	CDS	47428553	47428709	100	+	1	ID=FBgn0028540.1.mrna1.cds4;Name=FBgn0028540.1;Parent=FBgn0028540.1.mrna1;Target=FBgn0028540.1 266 422 +
ChrX	stalkie_big_nohaplotig	CDS	47428769	47428949	100	+	2	ID=FBgn0028540.1.mrna1.cds5;Name=FBgn0028540.1;Parent=FBgn0028540.1.mrna1;Target=FBgn0028540.1 423 603 +
ChrX	stalkie_big_nohaplotig	CDS	47429006	47429162	100	+	0	ID=FBgn0028540.1.mrna1.cds6;Name=FBgn0028540.1;Parent=FBgn0028540.1.mrna1;Target=FBgn0028540.1 604 760 +
ChrX	stalkie_big_nohaplotig	CDS	47430215	47430366	100	+	1	ID=FBgn0028540.1.mrna1.cds7;Name=FBgn0028540.1;Parent=FBgn0028540.1.mrna1;Target=FBgn0028540.1 761 912 +
ChrX	stalkie_big_nohaplotig	CDS	47431799	47431843	100	+	0	ID=FBgn0028540.1.mrna1.cds8;Name=FBgn0028540.1;Parent=FBgn0028540.1.mrna1;Target=FBgn0028540.1 913 957 +
ChrX	stalkie_big_nohaplotig	mRNA	47708695	47763525	.	-	.	ID=FBgn0051729.1.mrna1;Name=FBgn0051729.1;Parent=FBgn0051729.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3645;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	47763062	47763525	100	-	.	ID=FBgn0051729.1.mrna1.exon1;Name=FBgn0051729.1;Parent=FBgn0051729.1.mrna1;Target=FBgn0051729.1 1 464 +
ChrX	stalkie_big_nohaplotig	exon	47714946	47715454	100	-	.	ID=FBgn0051729.1.mrna1.exon2;Name=FBgn0051729.1;Parent=FBgn0051729.1.mrna1;Target=FBgn0051729.1 465 973 +
ChrX	stalkie_big_nohaplotig	exon	47714740	47714882	100	-	.	ID=FBgn0051729.1.mrna1.exon3;Name=FBgn0051729.1;Parent=FBgn0051729.1.mrna1;Target=FBgn0051729.1 974 1116 +
ChrX	stalkie_big_nohaplotig	exon	47713194	47713379	100	-	.	ID=FBgn0051729.1.mrna1.exon4;Name=FBgn0051729.1;Parent=FBgn0051729.1.mrna1;Target=FBgn0051729.1 1117 1302 +
ChrX	stalkie_big_nohaplotig	exon	47712005	47712599	100	-	.	ID=FBgn0051729.1.mrna1.exon5;Name=FBgn0051729.1;Parent=FBgn0051729.1.mrna1;Target=FBgn0051729.1 1303 1897 +
ChrX	stalkie_big_nohaplotig	exon	47711748	47711930	100	-	.	ID=FBgn0051729.1.mrna1.exon6;Name=FBgn0051729.1;Parent=FBgn0051729.1.mrna1;Target=FBgn0051729.1 1898 2080 +
ChrX	stalkie_big_nohaplotig	exon	47711265	47711639	100	-	.	ID=FBgn0051729.1.mrna1.exon7;Name=FBgn0051729.1;Parent=FBgn0051729.1.mrna1;Target=FBgn0051729.1 2081 2455 +
ChrX	stalkie_big_nohaplotig	exon	47710207	47711191	100	-	.	ID=FBgn0051729.1.mrna1.exon8;Name=FBgn0051729.1;Parent=FBgn0051729.1.mrna1;Target=FBgn0051729.1 2456 3440 +
ChrX	stalkie_big_nohaplotig	exon	47710064	47710137	100	-	.	ID=FBgn0051729.1.mrna1.exon9;Name=FBgn0051729.1;Parent=FBgn0051729.1.mrna1;Target=FBgn0051729.1 3441 3514 +
ChrX	stalkie_big_nohaplotig	exon	47708695	47708825	100	-	.	ID=FBgn0051729.1.mrna1.exon10;Name=FBgn0051729.1;Parent=FBgn0051729.1.mrna1;Target=FBgn0051729.1 3515 3645 +
ChrX	stalkie_big_nohaplotig	CDS	47763062	47763525	100	-	0	ID=FBgn0051729.1.mrna1.cds1;Name=FBgn0051729.1;Parent=FBgn0051729.1.mrna1;Target=FBgn0051729.1 1 464 +
ChrX	stalkie_big_nohaplotig	CDS	47714946	47715454	100	-	2	ID=FBgn0051729.1.mrna1.cds2;Name=FBgn0051729.1;Parent=FBgn0051729.1.mrna1;Target=FBgn0051729.1 465 973 +
ChrX	stalkie_big_nohaplotig	CDS	47714740	47714882	100	-	1	ID=FBgn0051729.1.mrna1.cds3;Name=FBgn0051729.1;Parent=FBgn0051729.1.mrna1;Target=FBgn0051729.1 974 1116 +
ChrX	stalkie_big_nohaplotig	CDS	47713194	47713379	100	-	0	ID=FBgn0051729.1.mrna1.cds4;Name=FBgn0051729.1;Parent=FBgn0051729.1.mrna1;Target=FBgn0051729.1 1117 1302 +
ChrX	stalkie_big_nohaplotig	CDS	47712005	47712599	100	-	0	ID=FBgn0051729.1.mrna1.cds5;Name=FBgn0051729.1;Parent=FBgn0051729.1.mrna1;Target=FBgn0051729.1 1303 1897 +
ChrX	stalkie_big_nohaplotig	CDS	47711748	47711930	100	-	1	ID=FBgn0051729.1.mrna1.cds6;Name=FBgn0051729.1;Parent=FBgn0051729.1.mrna1;Target=FBgn0051729.1 1898 2080 +
ChrX	stalkie_big_nohaplotig	CDS	47711265	47711639	100	-	1	ID=FBgn0051729.1.mrna1.cds7;Name=FBgn0051729.1;Parent=FBgn0051729.1.mrna1;Target=FBgn0051729.1 2081 2455 +
ChrX	stalkie_big_nohaplotig	CDS	47710207	47711191	100	-	1	ID=FBgn0051729.1.mrna1.cds8;Name=FBgn0051729.1;Parent=FBgn0051729.1.mrna1;Target=FBgn0051729.1 2456 3440 +
ChrX	stalkie_big_nohaplotig	CDS	47710064	47710137	100	-	2	ID=FBgn0051729.1.mrna1.cds9;Name=FBgn0051729.1;Parent=FBgn0051729.1.mrna1;Target=FBgn0051729.1 3441 3514 +
ChrX	stalkie_big_nohaplotig	CDS	47708695	47708825	100	-	1	ID=FBgn0051729.1.mrna1.cds10;Name=FBgn0051729.1;Parent=FBgn0051729.1.mrna1;Target=FBgn0051729.1 3515 3645 +
Chr2	stalkie_big_nohaplotig	mRNA	45862561	45866122	.	+	.	ID=FBgn0001187.2.mrna1;Name=FBgn0001187.2;Parent=FBgn0001187.2.path1;Dir=sensecoverage=100.0;identity=99.1;matches=1543;mismatches=13;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	45862561	45863454	99	+	.	ID=FBgn0001187.2.mrna1.exon1;Name=FBgn0001187.2;Parent=FBgn0001187.2.mrna1;Target=FBgn0001187.2 1 895 +
Chr2	stalkie_big_nohaplotig	exon	45865461	45866122	98	+	.	ID=FBgn0001187.2.mrna1.exon2;Name=FBgn0001187.2;Parent=FBgn0001187.2.mrna1;Target=FBgn0001187.2 896 1557 +
Chr2	stalkie_big_nohaplotig	CDS	45862605	45863454	99	+	0	ID=FBgn0001187.2.mrna1.cds1;Name=FBgn0001187.2;Parent=FBgn0001187.2.mrna1;Target=FBgn0001187.2 46 895 +
Chr2	stalkie_big_nohaplotig	CDS	45865461	45866122	98	+	1	ID=FBgn0001187.2.mrna1.cds2;Name=FBgn0001187.2;Parent=FBgn0001187.2.mrna1;Target=FBgn0001187.2 896 1557 +
Chr1	stalkie_big_nohaplotig	mRNA	60329861	60332551	.	+	.	ID=FBgn0036556.1.mrna1;Name=FBgn0036556.1;Parent=FBgn0036556.1.path1;Dir=sensecoverage=92.8;identity=100.0;matches=935;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	60329861	60330096	100	+	.	ID=FBgn0036556.1.mrna1.exon1;Name=FBgn0036556.1;Parent=FBgn0036556.1.mrna1;Target=FBgn0036556.1 74 309 +
Chr1	stalkie_big_nohaplotig	exon	60331602	60331783	100	+	.	ID=FBgn0036556.1.mrna1.exon2;Name=FBgn0036556.1;Parent=FBgn0036556.1.mrna1;Target=FBgn0036556.1 310 491 +
Chr1	stalkie_big_nohaplotig	exon	60331956	60332109	100	+	.	ID=FBgn0036556.1.mrna1.exon3;Name=FBgn0036556.1;Parent=FBgn0036556.1.mrna1;Target=FBgn0036556.1 492 645 +
Chr1	stalkie_big_nohaplotig	exon	60332189	60332551	100	+	.	ID=FBgn0036556.1.mrna1.exon4;Name=FBgn0036556.1;Parent=FBgn0036556.1.mrna1;Target=FBgn0036556.1 646 1008 +
Chr1	stalkie_big_nohaplotig	CDS	60329863	60330096	100	+	0	ID=FBgn0036556.1.mrna1.cds1;Name=FBgn0036556.1;Parent=FBgn0036556.1.mrna1;Target=FBgn0036556.1 76 309 +
Chr1	stalkie_big_nohaplotig	CDS	60331602	60331783	100	+	0	ID=FBgn0036556.1.mrna1.cds2;Name=FBgn0036556.1;Parent=FBgn0036556.1.mrna1;Target=FBgn0036556.1 310 491 +
Chr1	stalkie_big_nohaplotig	CDS	60331956	60332109	100	+	2	ID=FBgn0036556.1.mrna1.cds3;Name=FBgn0036556.1;Parent=FBgn0036556.1.mrna1;Target=FBgn0036556.1 492 645 +
Chr1	stalkie_big_nohaplotig	CDS	60332189	60332551	100	+	0	ID=FBgn0036556.1.mrna1.cds4;Name=FBgn0036556.1;Parent=FBgn0036556.1.mrna1;Target=FBgn0036556.1 646 1008 +
ChrX	stalkie_big_nohaplotig	mRNA	12473368	12475124	.	+	.	ID=FBgn0031894.1.mrna1;Name=FBgn0031894.1;Parent=FBgn0031894.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1549;mismatches=1;indels=1;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	12473368	12473877	99	+	.	ID=FBgn0031894.1.mrna1.exon1;Name=FBgn0031894.1;Parent=FBgn0031894.1.mrna1;Target=FBgn0031894.1 1 511 +
ChrX	stalkie_big_nohaplotig	exon	12474085	12475124	99	+	.	ID=FBgn0031894.1.mrna1.exon2;Name=FBgn0031894.1;Parent=FBgn0031894.1.mrna1;Target=FBgn0031894.1 512 1551 +
ChrX	stalkie_big_nohaplotig	CDS	12473370	12473410	97	+	0	ID=FBgn0031894.1.mrna1.cds1;Name=FBgn0031894.1;Parent=FBgn0031894.1.mrna1;Target=FBgn0031894.1 3 44 +
ChrX	stalkie_big_nohaplotig	mRNA	12864286	12891559	.	-	.	ID=FBgn0016660.1.mrna1;Name=FBgn0016660.1;Parent=FBgn0016660.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1362;mismatches=3;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	12891386	12891559	100	-	.	ID=FBgn0016660.1.mrna1.exon1;Name=FBgn0016660.1;Parent=FBgn0016660.1.mrna1;Target=FBgn0016660.1 1 174 +
ChrX	stalkie_big_nohaplotig	exon	12891187	12891317	100	-	.	ID=FBgn0016660.1.mrna1.exon2;Name=FBgn0016660.1;Parent=FBgn0016660.1.mrna1;Target=FBgn0016660.1 175 305 +
ChrX	stalkie_big_nohaplotig	exon	12871256	12871541	100	-	.	ID=FBgn0016660.1.mrna1.exon3;Name=FBgn0016660.1;Parent=FBgn0016660.1.mrna1;Target=FBgn0016660.1 306 591 +
ChrX	stalkie_big_nohaplotig	exon	12870130	12870374	99	-	.	ID=FBgn0016660.1.mrna1.exon4;Name=FBgn0016660.1;Parent=FBgn0016660.1.mrna1;Target=FBgn0016660.1 592 836 +
ChrX	stalkie_big_nohaplotig	exon	12864286	12864814	99	-	.	ID=FBgn0016660.1.mrna1.exon5;Name=FBgn0016660.1;Parent=FBgn0016660.1.mrna1;Target=FBgn0016660.1 837 1365 +
ChrX	stalkie_big_nohaplotig	CDS	12891386	12891559	100	-	0	ID=FBgn0016660.1.mrna1.cds1;Name=FBgn0016660.1;Parent=FBgn0016660.1.mrna1;Target=FBgn0016660.1 1 174 +
ChrX	stalkie_big_nohaplotig	CDS	12891187	12891317	100	-	0	ID=FBgn0016660.1.mrna1.cds2;Name=FBgn0016660.1;Parent=FBgn0016660.1.mrna1;Target=FBgn0016660.1 175 305 +
ChrX	stalkie_big_nohaplotig	CDS	12871256	12871541	100	-	2	ID=FBgn0016660.1.mrna1.cds3;Name=FBgn0016660.1;Parent=FBgn0016660.1.mrna1;Target=FBgn0016660.1 306 591 +
ChrX	stalkie_big_nohaplotig	CDS	12870130	12870374	99	-	0	ID=FBgn0016660.1.mrna1.cds4;Name=FBgn0016660.1;Parent=FBgn0016660.1.mrna1;Target=FBgn0016660.1 592 836 +
ChrX	stalkie_big_nohaplotig	CDS	12864286	12864814	99	-	2	ID=FBgn0016660.1.mrna1.cds5;Name=FBgn0016660.1;Parent=FBgn0016660.1.mrna1;Target=FBgn0016660.1 837 1365 +
Chr1	stalkie_big_nohaplotig	mRNA	72108975	72110546	.	-	.	ID=FBgn0029944.1.mrna2;Name=FBgn0029944.1;Parent=FBgn0029944.1.path2;Dir=indeterminatecoverage=93.2;identity=100.0;matches=1572;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	72108975	72110546	100	-	.	ID=FBgn0029944.1.mrna2.exon1;Name=FBgn0029944.1;Parent=FBgn0029944.1.mrna2;Target=FBgn0029944.1 1686 115 .
Chr1	stalkie_big_nohaplotig	CDS	72108975	72110546	100	-	0	ID=FBgn0029944.1.mrna2.cds1;Name=FBgn0029944.1;Parent=FBgn0029944.1.mrna2;Target=FBgn0029944.1 1686 115 .
Chr1	stalkie_big_nohaplotig	mRNA	120294346	120296136	.	+	.	ID=FBgn0004198.mrna1;Name=FBgn0004198;Parent=FBgn0004198.path1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1780;mismatches=11;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	120294346	120296136	99	+	.	ID=FBgn0004198.mrna1.exon1;Name=FBgn0004198;Parent=FBgn0004198.mrna1;Target=FBgn0004198 1791 1 .
Chr1	stalkie_big_nohaplotig	CDS	120294346	120296136	99	+	0	ID=FBgn0004198.mrna1.cds1;Name=FBgn0004198;Parent=FBgn0004198.mrna1;Target=FBgn0004198 1791 1 .
ChrX	stalkie_big_nohaplotig	mRNA	41271122	41272024	.	-	.	ID=ORF2171.mrna1;Name=ORF2171;Parent=ORF2171.path1;Dir=indeterminatecoverage=100.0;identity=99.2;matches=896;mismatches=7;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	41271122	41272024	99	-	.	ID=ORF2171.mrna1.exon1;Name=ORF2171;Parent=ORF2171.mrna1;Target=ORF2171 903 1 .
ChrX	stalkie_big_nohaplotig	CDS	41271122	41272024	99	-	0	ID=ORF2171.mrna1.cds1;Name=ORF2171;Parent=ORF2171.mrna1;Target=ORF2171 903 1 .
Chr1	stalkie_big_nohaplotig	mRNA	152592891	152594281	.	+	.	ID=FBgn0035157.1.mrna1;Name=FBgn0035157.1;Parent=FBgn0035157.1.path1;Dir=indeterminatecoverage=97.2;identity=99.5;matches=1384;mismatches=7;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	152592891	152594281	99	+	.	ID=FBgn0035157.1.mrna1.exon1;Name=FBgn0035157.1;Parent=FBgn0035157.1.mrna1;Target=FBgn0035157.1 1431 41 .
Chr1	stalkie_big_nohaplotig	CDS	152592893	152594281	99	+	0	ID=FBgn0035157.1.mrna1.cds1;Name=FBgn0035157.1;Parent=FBgn0035157.1.mrna1;Target=FBgn0035157.1 1431 43 .
Chr2	stalkie_big_nohaplotig	mRNA	99203387	99205997	.	-	.	ID=FBgn0038304.1.mrna1;Name=FBgn0038304.1;Parent=FBgn0038304.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2424;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	99205920	99205997	100	-	.	ID=FBgn0038304.1.mrna1.exon1;Name=FBgn0038304.1;Parent=FBgn0038304.1.mrna1;Target=FBgn0038304.1 1 78 +
Chr2	stalkie_big_nohaplotig	exon	99205325	99205847	100	-	.	ID=FBgn0038304.1.mrna1.exon2;Name=FBgn0038304.1;Parent=FBgn0038304.1.mrna1;Target=FBgn0038304.1 79 601 +
Chr2	stalkie_big_nohaplotig	exon	99204662	99205266	100	-	.	ID=FBgn0038304.1.mrna1.exon3;Name=FBgn0038304.1;Parent=FBgn0038304.1.mrna1;Target=FBgn0038304.1 602 1206 +
Chr2	stalkie_big_nohaplotig	exon	99203387	99204604	100	-	.	ID=FBgn0038304.1.mrna1.exon4;Name=FBgn0038304.1;Parent=FBgn0038304.1.mrna1;Target=FBgn0038304.1 1207 2424 +
Chr2	stalkie_big_nohaplotig	CDS	99205920	99205997	100	-	0	ID=FBgn0038304.1.mrna1.cds1;Name=FBgn0038304.1;Parent=FBgn0038304.1.mrna1;Target=FBgn0038304.1 1 78 +
Chr2	stalkie_big_nohaplotig	CDS	99205325	99205847	100	-	0	ID=FBgn0038304.1.mrna1.cds2;Name=FBgn0038304.1;Parent=FBgn0038304.1.mrna1;Target=FBgn0038304.1 79 601 +
Chr2	stalkie_big_nohaplotig	CDS	99204662	99205266	100	-	1	ID=FBgn0038304.1.mrna1.cds3;Name=FBgn0038304.1;Parent=FBgn0038304.1.mrna1;Target=FBgn0038304.1 602 1206 +
Chr2	stalkie_big_nohaplotig	CDS	99203387	99204604	100	-	0	ID=FBgn0038304.1.mrna1.cds4;Name=FBgn0038304.1;Parent=FBgn0038304.1.mrna1;Target=FBgn0038304.1 1207 2424 +
Chr2	stalkie_big_nohaplotig	mRNA	99156273	99161988	.	+	.	ID=FBgn0040271.1.mrna1;Name=FBgn0040271.1;Parent=FBgn0040271.1.path1;Dir=sensecoverage=89.8;identity=100.0;matches=2973;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	99156273	99156546	99	+	.	ID=FBgn0040271.1.mrna1.exon1;Name=FBgn0040271.1;Parent=FBgn0040271.1.mrna1;Target=FBgn0040271.1 339 612 +
Chr2	stalkie_big_nohaplotig	exon	99156637	99156782	100	+	.	ID=FBgn0040271.1.mrna1.exon2;Name=FBgn0040271.1;Parent=FBgn0040271.1.mrna1;Target=FBgn0040271.1 613 758 +
Chr2	stalkie_big_nohaplotig	exon	99156843	99158245	100	+	.	ID=FBgn0040271.1.mrna1.exon3;Name=FBgn0040271.1;Parent=FBgn0040271.1.mrna1;Target=FBgn0040271.1 759 2161 +
Chr2	stalkie_big_nohaplotig	exon	99158299	99158491	100	+	.	ID=FBgn0040271.1.mrna1.exon4;Name=FBgn0040271.1;Parent=FBgn0040271.1.mrna1;Target=FBgn0040271.1 2162 2354 +
Chr2	stalkie_big_nohaplotig	exon	99159831	99160141	100	+	.	ID=FBgn0040271.1.mrna1.exon5;Name=FBgn0040271.1;Parent=FBgn0040271.1.mrna1;Target=FBgn0040271.1 2355 2665 +
Chr2	stalkie_big_nohaplotig	exon	99160208	99160390	100	+	.	ID=FBgn0040271.1.mrna1.exon6;Name=FBgn0040271.1;Parent=FBgn0040271.1.mrna1;Target=FBgn0040271.1 2666 2848 +
Chr2	stalkie_big_nohaplotig	exon	99161471	99161549	100	+	.	ID=FBgn0040271.1.mrna1.exon7;Name=FBgn0040271.1;Parent=FBgn0040271.1.mrna1;Target=FBgn0040271.1 2849 2927 +
Chr2	stalkie_big_nohaplotig	exon	99161604	99161988	100	+	.	ID=FBgn0040271.1.mrna1.exon8;Name=FBgn0040271.1;Parent=FBgn0040271.1.mrna1;Target=FBgn0040271.1 2928 3312 +
Chr2	stalkie_big_nohaplotig	CDS	99156274	99156546	99	+	0	ID=FBgn0040271.1.mrna1.cds1;Name=FBgn0040271.1;Parent=FBgn0040271.1.mrna1;Target=FBgn0040271.1 340 612 +
Chr2	stalkie_big_nohaplotig	CDS	99156637	99156782	100	+	0	ID=FBgn0040271.1.mrna1.cds2;Name=FBgn0040271.1;Parent=FBgn0040271.1.mrna1;Target=FBgn0040271.1 613 758 +
Chr2	stalkie_big_nohaplotig	CDS	99156843	99158245	100	+	2	ID=FBgn0040271.1.mrna1.cds3;Name=FBgn0040271.1;Parent=FBgn0040271.1.mrna1;Target=FBgn0040271.1 759 2161 +
Chr2	stalkie_big_nohaplotig	CDS	99158299	99158491	100	+	1	ID=FBgn0040271.1.mrna1.cds4;Name=FBgn0040271.1;Parent=FBgn0040271.1.mrna1;Target=FBgn0040271.1 2162 2354 +
Chr2	stalkie_big_nohaplotig	CDS	99159831	99160141	100	+	2	ID=FBgn0040271.1.mrna1.cds5;Name=FBgn0040271.1;Parent=FBgn0040271.1.mrna1;Target=FBgn0040271.1 2355 2665 +
Chr2	stalkie_big_nohaplotig	CDS	99160208	99160390	100	+	1	ID=FBgn0040271.1.mrna1.cds6;Name=FBgn0040271.1;Parent=FBgn0040271.1.mrna1;Target=FBgn0040271.1 2666 2848 +
Chr2	stalkie_big_nohaplotig	CDS	99161471	99161549	100	+	1	ID=FBgn0040271.1.mrna1.cds7;Name=FBgn0040271.1;Parent=FBgn0040271.1.mrna1;Target=FBgn0040271.1 2849 2927 +
Chr2	stalkie_big_nohaplotig	CDS	99161604	99161988	100	+	2	ID=FBgn0040271.1.mrna1.cds8;Name=FBgn0040271.1;Parent=FBgn0040271.1.mrna1;Target=FBgn0040271.1 2928 3312 +
Chr2	stalkie_big_nohaplotig	mRNA	99355279	99359032	.	+	.	ID=FBgn0038391.1.mrna1;Name=FBgn0038391.1;Parent=FBgn0038391.1.path1;Dir=sensecoverage=94.8;identity=100.0;matches=1359;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	99355279	99355809	100	+	.	ID=FBgn0038391.1.mrna1.exon1;Name=FBgn0038391.1;Parent=FBgn0038391.1.mrna1;Target=FBgn0038391.1 76 606 +
Chr2	stalkie_big_nohaplotig	exon	99355968	99356421	100	+	.	ID=FBgn0038391.1.mrna1.exon2;Name=FBgn0038391.1;Parent=FBgn0038391.1.mrna1;Target=FBgn0038391.1 607 1060 +
Chr2	stalkie_big_nohaplotig	exon	99356486	99356765	100	+	.	ID=FBgn0038391.1.mrna1.exon3;Name=FBgn0038391.1;Parent=FBgn0038391.1.mrna1;Target=FBgn0038391.1 1061 1340 +
Chr2	stalkie_big_nohaplotig	exon	99358939	99359032	100	+	.	ID=FBgn0038391.1.mrna1.exon4;Name=FBgn0038391.1;Parent=FBgn0038391.1.mrna1;Target=FBgn0038391.1 1341 1434 +
Chr2	stalkie_big_nohaplotig	CDS	99355279	99355809	100	+	0	ID=FBgn0038391.1.mrna1.cds1;Name=FBgn0038391.1;Parent=FBgn0038391.1.mrna1;Target=FBgn0038391.1 76 606 +
Chr2	stalkie_big_nohaplotig	CDS	99355968	99356421	100	+	0	ID=FBgn0038391.1.mrna1.cds2;Name=FBgn0038391.1;Parent=FBgn0038391.1.mrna1;Target=FBgn0038391.1 607 1060 +
Chr2	stalkie_big_nohaplotig	CDS	99356486	99356765	100	+	1	ID=FBgn0038391.1.mrna1.cds3;Name=FBgn0038391.1;Parent=FBgn0038391.1.mrna1;Target=FBgn0038391.1 1061 1340 +
Chr2	stalkie_big_nohaplotig	CDS	99358939	99359032	100	+	2	ID=FBgn0038391.1.mrna1.cds4;Name=FBgn0038391.1;Parent=FBgn0038391.1.mrna1;Target=FBgn0038391.1 1341 1434 +
Chr2	stalkie_big_nohaplotig	mRNA	99571526	99917012	.	-	.	ID=FBgn0003165.1.mrna1;Name=FBgn0003165.1;Parent=FBgn0003165.1.path1;Dir=sensecoverage=97.3;identity=100.0;matches=3303;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	99916780	99917012	100	-	.	ID=FBgn0003165.1.mrna1.exon1;Name=FBgn0003165.1;Parent=FBgn0003165.1.mrna1;Target=FBgn0003165.1 94 326 +
Chr2	stalkie_big_nohaplotig	exon	99915726	99915861	100	-	.	ID=FBgn0003165.1.mrna1.exon2;Name=FBgn0003165.1;Parent=FBgn0003165.1.mrna1;Target=FBgn0003165.1 327 462 +
Chr2	stalkie_big_nohaplotig	exon	99915140	99915258	100	-	.	ID=FBgn0003165.1.mrna1.exon3;Name=FBgn0003165.1;Parent=FBgn0003165.1.mrna1;Target=FBgn0003165.1 463 581 +
Chr2	stalkie_big_nohaplotig	exon	99901714	99901954	100	-	.	ID=FBgn0003165.1.mrna1.exon4;Name=FBgn0003165.1;Parent=FBgn0003165.1.mrna1;Target=FBgn0003165.1 582 822 +
Chr2	stalkie_big_nohaplotig	exon	99901556	99901648	100	-	.	ID=FBgn0003165.1.mrna1.exon5;Name=FBgn0003165.1;Parent=FBgn0003165.1.mrna1;Target=FBgn0003165.1 823 915 +
Chr2	stalkie_big_nohaplotig	exon	99591897	99592265	100	-	.	ID=FBgn0003165.1.mrna1.exon6;Name=FBgn0003165.1;Parent=FBgn0003165.1.mrna1;Target=FBgn0003165.1 916 1284 +
Chr2	stalkie_big_nohaplotig	exon	99591070	99591283	100	-	.	ID=FBgn0003165.1.mrna1.exon7;Name=FBgn0003165.1;Parent=FBgn0003165.1.mrna1;Target=FBgn0003165.1 1285 1498 +
Chr2	stalkie_big_nohaplotig	exon	99576696	99577901	100	-	.	ID=FBgn0003165.1.mrna1.exon8;Name=FBgn0003165.1;Parent=FBgn0003165.1.mrna1;Target=FBgn0003165.1 1499 2704 +
Chr2	stalkie_big_nohaplotig	exon	99572124	99572292	100	-	.	ID=FBgn0003165.1.mrna1.exon9;Name=FBgn0003165.1;Parent=FBgn0003165.1.mrna1;Target=FBgn0003165.1 2705 2873 +
Chr2	stalkie_big_nohaplotig	exon	99571526	99572048	100	-	.	ID=FBgn0003165.1.mrna1.exon10;Name=FBgn0003165.1;Parent=FBgn0003165.1.mrna1;Target=FBgn0003165.1 2874 3396 +
Chr2	stalkie_big_nohaplotig	CDS	99916780	99917012	100	-	0	ID=FBgn0003165.1.mrna1.cds1;Name=FBgn0003165.1;Parent=FBgn0003165.1.mrna1;Target=FBgn0003165.1 94 326 +
Chr2	stalkie_big_nohaplotig	CDS	99915726	99915861	100	-	2	ID=FBgn0003165.1.mrna1.cds2;Name=FBgn0003165.1;Parent=FBgn0003165.1.mrna1;Target=FBgn0003165.1 327 462 +
Chr2	stalkie_big_nohaplotig	CDS	99915140	99915258	100	-	0	ID=FBgn0003165.1.mrna1.cds3;Name=FBgn0003165.1;Parent=FBgn0003165.1.mrna1;Target=FBgn0003165.1 463 581 +
Chr2	stalkie_big_nohaplotig	CDS	99901714	99901954	100	-	2	ID=FBgn0003165.1.mrna1.cds4;Name=FBgn0003165.1;Parent=FBgn0003165.1.mrna1;Target=FBgn0003165.1 582 822 +
Chr2	stalkie_big_nohaplotig	CDS	99901556	99901648	100	-	0	ID=FBgn0003165.1.mrna1.cds5;Name=FBgn0003165.1;Parent=FBgn0003165.1.mrna1;Target=FBgn0003165.1 823 915 +
Chr2	stalkie_big_nohaplotig	CDS	99591897	99592265	100	-	0	ID=FBgn0003165.1.mrna1.cds6;Name=FBgn0003165.1;Parent=FBgn0003165.1.mrna1;Target=FBgn0003165.1 916 1284 +
Chr2	stalkie_big_nohaplotig	CDS	99591070	99591283	100	-	0	ID=FBgn0003165.1.mrna1.cds7;Name=FBgn0003165.1;Parent=FBgn0003165.1.mrna1;Target=FBgn0003165.1 1285 1498 +
Chr2	stalkie_big_nohaplotig	CDS	99576696	99577901	100	-	1	ID=FBgn0003165.1.mrna1.cds8;Name=FBgn0003165.1;Parent=FBgn0003165.1.mrna1;Target=FBgn0003165.1 1499 2704 +
Chr2	stalkie_big_nohaplotig	CDS	99572124	99572292	100	-	1	ID=FBgn0003165.1.mrna1.cds9;Name=FBgn0003165.1;Parent=FBgn0003165.1.mrna1;Target=FBgn0003165.1 2705 2873 +
Chr2	stalkie_big_nohaplotig	CDS	99571526	99572048	100	-	2	ID=FBgn0003165.1.mrna1.cds10;Name=FBgn0003165.1;Parent=FBgn0003165.1.mrna1;Target=FBgn0003165.1 2874 3396 +
Chr2	stalkie_big_nohaplotig	mRNA	99094661	99095828	.	-	.	ID=FBgn0031607.4.mrna1;Name=FBgn0031607.4;Parent=FBgn0031607.4.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1041;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	99095718	99095828	100	-	.	ID=FBgn0031607.4.mrna1.exon1;Name=FBgn0031607.4;Parent=FBgn0031607.4.mrna1;Target=FBgn0031607.4 1 111 +
Chr2	stalkie_big_nohaplotig	exon	99094661	99095593	99	-	.	ID=FBgn0031607.4.mrna1.exon2;Name=FBgn0031607.4;Parent=FBgn0031607.4.mrna1;Target=FBgn0031607.4 112 1044 +
Chr2	stalkie_big_nohaplotig	CDS	99095718	99095828	100	-	0	ID=FBgn0031607.4.mrna1.cds1;Name=FBgn0031607.4;Parent=FBgn0031607.4.mrna1;Target=FBgn0031607.4 1 111 +
Chr2	stalkie_big_nohaplotig	CDS	99094661	99095593	99	-	0	ID=FBgn0031607.4.mrna1.cds2;Name=FBgn0031607.4;Parent=FBgn0031607.4.mrna1;Target=FBgn0031607.4 112 1044 +
ChrX	stalkie_big_nohaplotig	mRNA	3631605	3646113	.	+	.	ID=FBgn0032859.1.mrna1;Name=FBgn0032859.1;Parent=FBgn0032859.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=915;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	3631605	3631690	100	+	.	ID=FBgn0032859.1.mrna1.exon1;Name=FBgn0032859.1;Parent=FBgn0032859.1.mrna1;Target=FBgn0032859.1 1 86 +
ChrX	stalkie_big_nohaplotig	exon	3638110	3638203	100	+	.	ID=FBgn0032859.1.mrna1.exon2;Name=FBgn0032859.1;Parent=FBgn0032859.1.mrna1;Target=FBgn0032859.1 87 180 +
ChrX	stalkie_big_nohaplotig	exon	3638277	3638376	100	+	.	ID=FBgn0032859.1.mrna1.exon3;Name=FBgn0032859.1;Parent=FBgn0032859.1.mrna1;Target=FBgn0032859.1 181 280 +
ChrX	stalkie_big_nohaplotig	exon	3642382	3642568	100	+	.	ID=FBgn0032859.1.mrna1.exon4;Name=FBgn0032859.1;Parent=FBgn0032859.1.mrna1;Target=FBgn0032859.1 281 467 +
ChrX	stalkie_big_nohaplotig	exon	3642623	3642843	100	+	.	ID=FBgn0032859.1.mrna1.exon5;Name=FBgn0032859.1;Parent=FBgn0032859.1.mrna1;Target=FBgn0032859.1 468 688 +
ChrX	stalkie_big_nohaplotig	exon	3645754	3645845	100	+	.	ID=FBgn0032859.1.mrna1.exon6;Name=FBgn0032859.1;Parent=FBgn0032859.1.mrna1;Target=FBgn0032859.1 689 780 +
ChrX	stalkie_big_nohaplotig	exon	3645913	3646022	100	+	.	ID=FBgn0032859.1.mrna1.exon7;Name=FBgn0032859.1;Parent=FBgn0032859.1.mrna1;Target=FBgn0032859.1 781 890 +
ChrX	stalkie_big_nohaplotig	exon	3646089	3646113	100	+	.	ID=FBgn0032859.1.mrna1.exon8;Name=FBgn0032859.1;Parent=FBgn0032859.1.mrna1;Target=FBgn0032859.1 891 915 +
ChrX	stalkie_big_nohaplotig	CDS	3631605	3631690	100	+	0	ID=FBgn0032859.1.mrna1.cds1;Name=FBgn0032859.1;Parent=FBgn0032859.1.mrna1;Target=FBgn0032859.1 1 86 +
ChrX	stalkie_big_nohaplotig	CDS	3638110	3638203	100	+	2	ID=FBgn0032859.1.mrna1.cds2;Name=FBgn0032859.1;Parent=FBgn0032859.1.mrna1;Target=FBgn0032859.1 87 180 +
ChrX	stalkie_big_nohaplotig	CDS	3638277	3638376	100	+	0	ID=FBgn0032859.1.mrna1.cds3;Name=FBgn0032859.1;Parent=FBgn0032859.1.mrna1;Target=FBgn0032859.1 181 280 +
ChrX	stalkie_big_nohaplotig	CDS	3642382	3642568	100	+	1	ID=FBgn0032859.1.mrna1.cds4;Name=FBgn0032859.1;Parent=FBgn0032859.1.mrna1;Target=FBgn0032859.1 281 467 +
ChrX	stalkie_big_nohaplotig	CDS	3642623	3642843	100	+	2	ID=FBgn0032859.1.mrna1.cds5;Name=FBgn0032859.1;Parent=FBgn0032859.1.mrna1;Target=FBgn0032859.1 468 688 +
ChrX	stalkie_big_nohaplotig	CDS	3645754	3645845	100	+	1	ID=FBgn0032859.1.mrna1.cds6;Name=FBgn0032859.1;Parent=FBgn0032859.1.mrna1;Target=FBgn0032859.1 689 780 +
ChrX	stalkie_big_nohaplotig	CDS	3645913	3646022	100	+	0	ID=FBgn0032859.1.mrna1.cds7;Name=FBgn0032859.1;Parent=FBgn0032859.1.mrna1;Target=FBgn0032859.1 781 890 +
ChrX	stalkie_big_nohaplotig	CDS	3646089	3646113	100	+	2	ID=FBgn0032859.1.mrna1.cds8;Name=FBgn0032859.1;Parent=FBgn0032859.1.mrna1;Target=FBgn0032859.1 891 915 +
ChrX	stalkie_big_nohaplotig	mRNA	3766521	3778473	.	-	.	ID=FBgn0032666.1.mrna1;Name=FBgn0032666.1;Parent=FBgn0032666.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2063;mismatches=4;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	3778014	3778473	99	-	.	ID=FBgn0032666.1.mrna1.exon1;Name=FBgn0032666.1;Parent=FBgn0032666.1.mrna1;Target=FBgn0032666.1 1 460 +
ChrX	stalkie_big_nohaplotig	exon	3770060	3770384	100	-	.	ID=FBgn0032666.1.mrna1.exon2;Name=FBgn0032666.1;Parent=FBgn0032666.1.mrna1;Target=FBgn0032666.1 461 785 +
ChrX	stalkie_big_nohaplotig	exon	3769371	3769774	100	-	.	ID=FBgn0032666.1.mrna1.exon3;Name=FBgn0032666.1;Parent=FBgn0032666.1.mrna1;Target=FBgn0032666.1 786 1189 +
ChrX	stalkie_big_nohaplotig	exon	3769182	3769303	100	-	.	ID=FBgn0032666.1.mrna1.exon4;Name=FBgn0032666.1;Parent=FBgn0032666.1.mrna1;Target=FBgn0032666.1 1190 1311 +
ChrX	stalkie_big_nohaplotig	exon	3768971	3769086	100	-	.	ID=FBgn0032666.1.mrna1.exon5;Name=FBgn0032666.1;Parent=FBgn0032666.1.mrna1;Target=FBgn0032666.1 1312 1427 +
ChrX	stalkie_big_nohaplotig	exon	3768027	3768144	100	-	.	ID=FBgn0032666.1.mrna1.exon6;Name=FBgn0032666.1;Parent=FBgn0032666.1.mrna1;Target=FBgn0032666.1 1428 1545 +
ChrX	stalkie_big_nohaplotig	exon	3766521	3767042	99	-	.	ID=FBgn0032666.1.mrna1.exon7;Name=FBgn0032666.1;Parent=FBgn0032666.1.mrna1;Target=FBgn0032666.1 1546 2067 +
ChrX	stalkie_big_nohaplotig	CDS	3778014	3778473	99	-	0	ID=FBgn0032666.1.mrna1.cds1;Name=FBgn0032666.1;Parent=FBgn0032666.1.mrna1;Target=FBgn0032666.1 1 460 +
ChrX	stalkie_big_nohaplotig	CDS	3770060	3770384	100	-	1	ID=FBgn0032666.1.mrna1.cds2;Name=FBgn0032666.1;Parent=FBgn0032666.1.mrna1;Target=FBgn0032666.1 461 785 +
ChrX	stalkie_big_nohaplotig	CDS	3769371	3769774	100	-	2	ID=FBgn0032666.1.mrna1.cds3;Name=FBgn0032666.1;Parent=FBgn0032666.1.mrna1;Target=FBgn0032666.1 786 1189 +
ChrX	stalkie_big_nohaplotig	CDS	3769182	3769303	100	-	1	ID=FBgn0032666.1.mrna1.cds4;Name=FBgn0032666.1;Parent=FBgn0032666.1.mrna1;Target=FBgn0032666.1 1190 1311 +
ChrX	stalkie_big_nohaplotig	CDS	3768971	3769086	100	-	0	ID=FBgn0032666.1.mrna1.cds5;Name=FBgn0032666.1;Parent=FBgn0032666.1.mrna1;Target=FBgn0032666.1 1312 1427 +
ChrX	stalkie_big_nohaplotig	CDS	3768027	3768144	100	-	2	ID=FBgn0032666.1.mrna1.cds6;Name=FBgn0032666.1;Parent=FBgn0032666.1.mrna1;Target=FBgn0032666.1 1428 1545 +
ChrX	stalkie_big_nohaplotig	CDS	3766521	3767042	99	-	0	ID=FBgn0032666.1.mrna1.cds7;Name=FBgn0032666.1;Parent=FBgn0032666.1.mrna1;Target=FBgn0032666.1 1546 2067 +
ChrX	stalkie_big_nohaplotig	mRNA	3363431	3367229	.	-	.	ID=FBgn0031413.1.mrna1;Name=FBgn0031413.1;Parent=FBgn0031413.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1065;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	3366691	3367229	100	-	.	ID=FBgn0031413.1.mrna1.exon1;Name=FBgn0031413.1;Parent=FBgn0031413.1.mrna1;Target=FBgn0031413.1 1 539 +
ChrX	stalkie_big_nohaplotig	exon	3363908	3364091	100	-	.	ID=FBgn0031413.1.mrna1.exon2;Name=FBgn0031413.1;Parent=FBgn0031413.1.mrna1;Target=FBgn0031413.1 540 723 +
ChrX	stalkie_big_nohaplotig	exon	3363431	3363772	100	-	.	ID=FBgn0031413.1.mrna1.exon3;Name=FBgn0031413.1;Parent=FBgn0031413.1.mrna1;Target=FBgn0031413.1 724 1065 +
ChrX	stalkie_big_nohaplotig	CDS	3366691	3367229	100	-	0	ID=FBgn0031413.1.mrna1.cds1;Name=FBgn0031413.1;Parent=FBgn0031413.1.mrna1;Target=FBgn0031413.1 1 539 +
ChrX	stalkie_big_nohaplotig	CDS	3363908	3364091	100	-	2	ID=FBgn0031413.1.mrna1.cds2;Name=FBgn0031413.1;Parent=FBgn0031413.1.mrna1;Target=FBgn0031413.1 540 723 +
ChrX	stalkie_big_nohaplotig	CDS	3363431	3363772	100	-	0	ID=FBgn0031413.1.mrna1.cds3;Name=FBgn0031413.1;Parent=FBgn0031413.1.mrna1;Target=FBgn0031413.1 724 1065 +
ChrX	stalkie_big_nohaplotig	mRNA	3424466	3519018	.	+	.	ID=FBgn0031414.1.mrna1;Name=FBgn0031414.1;Parent=FBgn0031414.1.path1;Dir=sensecoverage=100.0;identity=98.9;matches=6033;mismatches=6;indels=60;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	3424466	3424779	83	+	.	ID=FBgn0031414.1.mrna1.exon1;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 1 374 +
ChrX	stalkie_big_nohaplotig	exon	3428845	3428993	100	+	.	ID=FBgn0031414.1.mrna1.exon2;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 375 523 +
ChrX	stalkie_big_nohaplotig	exon	3461156	3461308	100	+	.	ID=FBgn0031414.1.mrna1.exon3;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 524 676 +
ChrX	stalkie_big_nohaplotig	exon	3463139	3465156	99	+	.	ID=FBgn0031414.1.mrna1.exon4;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 677 2694 +
ChrX	stalkie_big_nohaplotig	exon	3485746	3486098	100	+	.	ID=FBgn0031414.1.mrna1.exon5;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 2695 3047 +
ChrX	stalkie_big_nohaplotig	exon	3499117	3499389	100	+	.	ID=FBgn0031414.1.mrna1.exon6;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 3048 3320 +
ChrX	stalkie_big_nohaplotig	exon	3505107	3505399	99	+	.	ID=FBgn0031414.1.mrna1.exon7;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 3321 3613 +
ChrX	stalkie_big_nohaplotig	exon	3507078	3507738	100	+	.	ID=FBgn0031414.1.mrna1.exon8;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 3614 4274 +
ChrX	stalkie_big_nohaplotig	exon	3507797	3507960	100	+	.	ID=FBgn0031414.1.mrna1.exon9;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 4275 4438 +
ChrX	stalkie_big_nohaplotig	exon	3508950	3509681	100	+	.	ID=FBgn0031414.1.mrna1.exon10;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 4439 5170 +
ChrX	stalkie_big_nohaplotig	exon	3509748	3509990	100	+	.	ID=FBgn0031414.1.mrna1.exon11;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 5171 5413 +
ChrX	stalkie_big_nohaplotig	exon	3512947	3513441	100	+	.	ID=FBgn0031414.1.mrna1.exon12;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 5414 5908 +
ChrX	stalkie_big_nohaplotig	exon	3518828	3519018	100	+	.	ID=FBgn0031414.1.mrna1.exon13;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 5909 6099 +
ChrX	stalkie_big_nohaplotig	CDS	3424466	3424779	83	+	0	ID=FBgn0031414.1.mrna1.cds1;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 1 374 +
ChrX	stalkie_big_nohaplotig	CDS	3428845	3428993	100	+	2	ID=FBgn0031414.1.mrna1.cds2;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 375 523 +
ChrX	stalkie_big_nohaplotig	CDS	3461156	3461308	100	+	1	ID=FBgn0031414.1.mrna1.cds3;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 524 676 +
ChrX	stalkie_big_nohaplotig	CDS	3463139	3465156	99	+	1	ID=FBgn0031414.1.mrna1.cds4;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 677 2694 +
ChrX	stalkie_big_nohaplotig	CDS	3485746	3486098	100	+	0	ID=FBgn0031414.1.mrna1.cds5;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 2695 3047 +
ChrX	stalkie_big_nohaplotig	CDS	3499117	3499389	100	+	2	ID=FBgn0031414.1.mrna1.cds6;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 3048 3320 +
ChrX	stalkie_big_nohaplotig	CDS	3505107	3505399	99	+	2	ID=FBgn0031414.1.mrna1.cds7;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 3321 3613 +
ChrX	stalkie_big_nohaplotig	CDS	3507078	3507738	100	+	1	ID=FBgn0031414.1.mrna1.cds8;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 3614 4274 +
ChrX	stalkie_big_nohaplotig	CDS	3507797	3507960	100	+	2	ID=FBgn0031414.1.mrna1.cds9;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 4275 4438 +
ChrX	stalkie_big_nohaplotig	CDS	3508950	3509681	100	+	1	ID=FBgn0031414.1.mrna1.cds10;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 4439 5170 +
ChrX	stalkie_big_nohaplotig	CDS	3509748	3509990	100	+	1	ID=FBgn0031414.1.mrna1.cds11;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 5171 5413 +
ChrX	stalkie_big_nohaplotig	CDS	3512947	3513441	100	+	1	ID=FBgn0031414.1.mrna1.cds12;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 5414 5908 +
ChrX	stalkie_big_nohaplotig	CDS	3518828	3519018	100	+	1	ID=FBgn0031414.1.mrna1.cds13;Name=FBgn0031414.1;Parent=FBgn0031414.1.mrna1;Target=FBgn0031414.1 5909 6099 +
Chr1	stalkie_big_nohaplotig	mRNA	69971396	69975441	.	+	.	ID=FBgn0028978.1.mrna1;Name=FBgn0028978.1;Parent=FBgn0028978.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1365;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	69971396	69972276	100	+	.	ID=FBgn0028978.1.mrna1.exon1;Name=FBgn0028978.1;Parent=FBgn0028978.1.mrna1;Target=FBgn0028978.1 1 881 +
Chr1	stalkie_big_nohaplotig	exon	69974958	69975441	100	+	.	ID=FBgn0028978.1.mrna1.exon2;Name=FBgn0028978.1;Parent=FBgn0028978.1.mrna1;Target=FBgn0028978.1 882 1365 +
Chr1	stalkie_big_nohaplotig	CDS	69971396	69972276	100	+	0	ID=FBgn0028978.1.mrna1.cds1;Name=FBgn0028978.1;Parent=FBgn0028978.1.mrna1;Target=FBgn0028978.1 1 881 +
Chr1	stalkie_big_nohaplotig	CDS	69974958	69975441	100	+	2	ID=FBgn0028978.1.mrna1.cds2;Name=FBgn0028978.1;Parent=FBgn0028978.1.mrna1;Target=FBgn0028978.1 882 1365 +
Chr1	stalkie_big_nohaplotig	mRNA	130074175	130076052	.	+	.	ID=FBgn0030588.1.mrna1;Name=FBgn0030588.1;Parent=FBgn0030588.1.path1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1867;mismatches=11;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	130074175	130076052	99	+	.	ID=FBgn0030588.1.mrna1.exon1;Name=FBgn0030588.1;Parent=FBgn0030588.1.mrna1;Target=FBgn0030588.1 1878 1 .
Chr1	stalkie_big_nohaplotig	CDS	130074175	130076052	99	+	0	ID=FBgn0030588.1.mrna1.cds1;Name=FBgn0030588.1;Parent=FBgn0030588.1.mrna1;Target=FBgn0030588.1 1878 1 .
Chr1	stalkie_big_nohaplotig	mRNA	130071834	130073201	.	+	.	ID=FBgn0030588.2.mrna1;Name=FBgn0030588.2;Parent=FBgn0030588.2.path1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1363;mismatches=5;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	130071834	130073201	99	+	.	ID=FBgn0030588.2.mrna1.exon1;Name=FBgn0030588.2;Parent=FBgn0030588.2.mrna1;Target=FBgn0030588.2 1368 1 .
Chr1	stalkie_big_nohaplotig	CDS	130071834	130073201	99	+	0	ID=FBgn0030588.2.mrna1.cds1;Name=FBgn0030588.2;Parent=FBgn0030588.2.mrna1;Target=FBgn0030588.2 1368 1 .
Chr1	stalkie_big_nohaplotig	mRNA	12800431	12804645	.	+	.	ID=FBgn0001253.1.mrna1;Name=FBgn0001253.1;Parent=FBgn0001253.1.path1;Dir=sensecoverage=99.7;identity=99.6;matches=3841;mismatches=16;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	12800431	12803475	99	+	.	ID=FBgn0001253.1.mrna1.exon1;Name=FBgn0001253.1;Parent=FBgn0001253.1.mrna1;Target=FBgn0001253.1 14 3058 +
Chr1	stalkie_big_nohaplotig	exon	12803542	12803747	100	+	.	ID=FBgn0001253.1.mrna1.exon2;Name=FBgn0001253.1;Parent=FBgn0001253.1.mrna1;Target=FBgn0001253.1 3059 3264 +
Chr1	stalkie_big_nohaplotig	exon	12803970	12804507	99	+	.	ID=FBgn0001253.1.mrna1.exon3;Name=FBgn0001253.1;Parent=FBgn0001253.1.mrna1;Target=FBgn0001253.1 3265 3802 +
Chr1	stalkie_big_nohaplotig	exon	12804578	12804645	100	+	.	ID=FBgn0001253.1.mrna1.exon4;Name=FBgn0001253.1;Parent=FBgn0001253.1.mrna1;Target=FBgn0001253.1 3803 3870 +
Chr1	stalkie_big_nohaplotig	CDS	12800433	12803475	99	+	0	ID=FBgn0001253.1.mrna1.cds1;Name=FBgn0001253.1;Parent=FBgn0001253.1.mrna1;Target=FBgn0001253.1 16 3058 +
Chr1	stalkie_big_nohaplotig	CDS	12803542	12803747	100	+	1	ID=FBgn0001253.1.mrna1.cds2;Name=FBgn0001253.1;Parent=FBgn0001253.1.mrna1;Target=FBgn0001253.1 3059 3264 +
Chr1	stalkie_big_nohaplotig	CDS	12803970	12804507	99	+	0	ID=FBgn0001253.1.mrna1.cds3;Name=FBgn0001253.1;Parent=FBgn0001253.1.mrna1;Target=FBgn0001253.1 3265 3802 +
Chr1	stalkie_big_nohaplotig	CDS	12804578	12804645	100	+	1	ID=FBgn0001253.1.mrna1.cds4;Name=FBgn0001253.1;Parent=FBgn0001253.1.mrna1;Target=FBgn0001253.1 3803 3870 +
Chr1	stalkie_big_nohaplotig	mRNA	12720227	12721732	.	-	.	ID=FBgn0035878.1.mrna1;Name=FBgn0035878.1;Parent=FBgn0035878.1.path1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=1502;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	12720227	12721732	99	-	.	ID=FBgn0035878.1.mrna1.exon1;Name=FBgn0035878.1;Parent=FBgn0035878.1.mrna1;Target=FBgn0035878.1 1506 1 .
Chr1	stalkie_big_nohaplotig	CDS	12720227	12721732	99	-	0	ID=FBgn0035878.1.mrna1.cds1;Name=FBgn0035878.1;Parent=FBgn0035878.1.mrna1;Target=FBgn0035878.1 1506 1 .
Chr1	stalkie_big_nohaplotig	mRNA	12886830	12904121	.	-	.	ID=FBgn0004865.mrna1;Name=FBgn0004865;Parent=FBgn0004865.path1;Dir=sensecoverage=99.8;identity=99.9;matches=1223;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	12903959	12904121	100	-	.	ID=FBgn0004865.mrna1.exon1;Name=FBgn0004865;Parent=FBgn0004865.mrna1;Target=FBgn0004865 4 166 +
Chr1	stalkie_big_nohaplotig	exon	12888641	12889050	100	-	.	ID=FBgn0004865.mrna1.exon2;Name=FBgn0004865;Parent=FBgn0004865.mrna1;Target=FBgn0004865 167 576 +
Chr1	stalkie_big_nohaplotig	exon	12888295	12888570	99	-	.	ID=FBgn0004865.mrna1.exon3;Name=FBgn0004865;Parent=FBgn0004865.mrna1;Target=FBgn0004865 577 852 +
Chr1	stalkie_big_nohaplotig	exon	12887089	12887282	100	-	.	ID=FBgn0004865.mrna1.exon4;Name=FBgn0004865;Parent=FBgn0004865.mrna1;Target=FBgn0004865 853 1046 +
Chr1	stalkie_big_nohaplotig	exon	12886830	12887010	100	-	.	ID=FBgn0004865.mrna1.exon5;Name=FBgn0004865;Parent=FBgn0004865.mrna1;Target=FBgn0004865 1047 1227 +
Chr1	stalkie_big_nohaplotig	CDS	12903959	12904121	100	-	0	ID=FBgn0004865.mrna1.cds1;Name=FBgn0004865;Parent=FBgn0004865.mrna1;Target=FBgn0004865 4 166 +
Chr1	stalkie_big_nohaplotig	CDS	12888641	12889050	100	-	1	ID=FBgn0004865.mrna1.cds2;Name=FBgn0004865;Parent=FBgn0004865.mrna1;Target=FBgn0004865 167 576 +
Chr1	stalkie_big_nohaplotig	CDS	12888295	12888570	99	-	0	ID=FBgn0004865.mrna1.cds3;Name=FBgn0004865;Parent=FBgn0004865.mrna1;Target=FBgn0004865 577 852 +
Chr1	stalkie_big_nohaplotig	CDS	12887089	12887282	100	-	0	ID=FBgn0004865.mrna1.cds4;Name=FBgn0004865;Parent=FBgn0004865.mrna1;Target=FBgn0004865 853 1046 +
Chr1	stalkie_big_nohaplotig	CDS	12886830	12887010	100	-	2	ID=FBgn0004865.mrna1.cds5;Name=FBgn0004865;Parent=FBgn0004865.mrna1;Target=FBgn0004865 1047 1227 +
Chr1	stalkie_big_nohaplotig	mRNA	11403516	11405214	.	-	.	ID=FBgn0020224.mrna1;Name=FBgn0020224;Parent=FBgn0020224.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1345;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	11404658	11405214	100	-	.	ID=FBgn0020224.mrna1.exon1;Name=FBgn0020224;Parent=FBgn0020224.mrna1;Target=FBgn0020224 1 557 +
Chr1	stalkie_big_nohaplotig	exon	11404282	11404572	99	-	.	ID=FBgn0020224.mrna1.exon2;Name=FBgn0020224;Parent=FBgn0020224.mrna1;Target=FBgn0020224 558 848 +
Chr1	stalkie_big_nohaplotig	exon	11404103	11404219	100	-	.	ID=FBgn0020224.mrna1.exon3;Name=FBgn0020224;Parent=FBgn0020224.mrna1;Target=FBgn0020224 849 965 +
Chr1	stalkie_big_nohaplotig	exon	11403908	11404032	100	-	.	ID=FBgn0020224.mrna1.exon4;Name=FBgn0020224;Parent=FBgn0020224.mrna1;Target=FBgn0020224 966 1090 +
Chr1	stalkie_big_nohaplotig	exon	11403720	11403841	100	-	.	ID=FBgn0020224.mrna1.exon5;Name=FBgn0020224;Parent=FBgn0020224.mrna1;Target=FBgn0020224 1091 1212 +
Chr1	stalkie_big_nohaplotig	exon	11403516	11403650	100	-	.	ID=FBgn0020224.mrna1.exon6;Name=FBgn0020224;Parent=FBgn0020224.mrna1;Target=FBgn0020224 1213 1347 +
Chr1	stalkie_big_nohaplotig	CDS	11404658	11405214	100	-	0	ID=FBgn0020224.mrna1.cds1;Name=FBgn0020224;Parent=FBgn0020224.mrna1;Target=FBgn0020224 1 557 +
Chr1	stalkie_big_nohaplotig	CDS	11404282	11404572	99	-	2	ID=FBgn0020224.mrna1.cds2;Name=FBgn0020224;Parent=FBgn0020224.mrna1;Target=FBgn0020224 558 848 +
Chr1	stalkie_big_nohaplotig	CDS	11404103	11404219	100	-	2	ID=FBgn0020224.mrna1.cds3;Name=FBgn0020224;Parent=FBgn0020224.mrna1;Target=FBgn0020224 849 965 +
Chr1	stalkie_big_nohaplotig	CDS	11403908	11404032	100	-	2	ID=FBgn0020224.mrna1.cds4;Name=FBgn0020224;Parent=FBgn0020224.mrna1;Target=FBgn0020224 966 1090 +
Chr1	stalkie_big_nohaplotig	CDS	11403720	11403841	100	-	1	ID=FBgn0020224.mrna1.cds5;Name=FBgn0020224;Parent=FBgn0020224.mrna1;Target=FBgn0020224 1091 1212 +
Chr1	stalkie_big_nohaplotig	CDS	11403516	11403650	100	-	0	ID=FBgn0020224.mrna1.cds6;Name=FBgn0020224;Parent=FBgn0020224.mrna1;Target=FBgn0020224 1213 1347 +
Chr1	stalkie_big_nohaplotig	mRNA	11397909	11399200	.	-	.	ID=FBgn0020224.mrna1;Name=FBgn0020224;Parent=FBgn0020224.path1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=1291;mismatches=1;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	11397909	11399200	99	-	.	ID=FBgn0020224.mrna1.exon1;Name=FBgn0020224;Parent=FBgn0020224.mrna1;Target=FBgn0020224 1293 1 .
Chr1	stalkie_big_nohaplotig	CDS	11397909	11398973	99	-	0	ID=FBgn0020224.mrna1.cds1;Name=FBgn0020224;Parent=FBgn0020224.mrna1;Target=FBgn0020224 1293 229 .
Chr1	stalkie_big_nohaplotig	mRNA	12108283	12111381	.	-	.	ID=FBgn0035903.1.mrna1;Name=FBgn0035903.1;Parent=FBgn0035903.1.path1;Dir=sensecoverage=100.0;identity=99.4;matches=1848;mismatches=12;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	12111266	12111381	100	-	.	ID=FBgn0035903.1.mrna1.exon1;Name=FBgn0035903.1;Parent=FBgn0035903.1.mrna1;Target=FBgn0035903.1 1 116 +
Chr1	stalkie_big_nohaplotig	exon	12111060	12111189	99	-	.	ID=FBgn0035903.1.mrna1.exon2;Name=FBgn0035903.1;Parent=FBgn0035903.1.mrna1;Target=FBgn0035903.1 117 246 +
Chr1	stalkie_big_nohaplotig	exon	12110162	12110999	99	-	.	ID=FBgn0035903.1.mrna1.exon3;Name=FBgn0035903.1;Parent=FBgn0035903.1.mrna1;Target=FBgn0035903.1 247 1084 +
Chr1	stalkie_big_nohaplotig	exon	12109566	12110095	98	-	.	ID=FBgn0035903.1.mrna1.exon4;Name=FBgn0035903.1;Parent=FBgn0035903.1.mrna1;Target=FBgn0035903.1 1085 1614 +
Chr1	stalkie_big_nohaplotig	exon	12109410	12109462	100	-	.	ID=FBgn0035903.1.mrna1.exon5;Name=FBgn0035903.1;Parent=FBgn0035903.1.mrna1;Target=FBgn0035903.1 1615 1667 +
Chr1	stalkie_big_nohaplotig	exon	12109240	12109340	99	-	.	ID=FBgn0035903.1.mrna1.exon6;Name=FBgn0035903.1;Parent=FBgn0035903.1.mrna1;Target=FBgn0035903.1 1668 1768 +
Chr1	stalkie_big_nohaplotig	exon	12108283	12108374	98	-	.	ID=FBgn0035903.1.mrna1.exon7;Name=FBgn0035903.1;Parent=FBgn0035903.1.mrna1;Target=FBgn0035903.1 1769 1860 +
Chr1	stalkie_big_nohaplotig	CDS	12111266	12111381	100	-	0	ID=FBgn0035903.1.mrna1.cds1;Name=FBgn0035903.1;Parent=FBgn0035903.1.mrna1;Target=FBgn0035903.1 1 116 +
Chr1	stalkie_big_nohaplotig	CDS	12111060	12111189	99	-	2	ID=FBgn0035903.1.mrna1.cds2;Name=FBgn0035903.1;Parent=FBgn0035903.1.mrna1;Target=FBgn0035903.1 117 246 +
Chr1	stalkie_big_nohaplotig	CDS	12110162	12110999	99	-	0	ID=FBgn0035903.1.mrna1.cds3;Name=FBgn0035903.1;Parent=FBgn0035903.1.mrna1;Target=FBgn0035903.1 247 1084 +
Chr1	stalkie_big_nohaplotig	CDS	12109566	12110095	98	-	1	ID=FBgn0035903.1.mrna1.cds4;Name=FBgn0035903.1;Parent=FBgn0035903.1.mrna1;Target=FBgn0035903.1 1085 1614 +
Chr1	stalkie_big_nohaplotig	CDS	12109410	12109462	100	-	0	ID=FBgn0035903.1.mrna1.cds5;Name=FBgn0035903.1;Parent=FBgn0035903.1.mrna1;Target=FBgn0035903.1 1615 1667 +
Chr1	stalkie_big_nohaplotig	CDS	12109240	12109340	99	-	2	ID=FBgn0035903.1.mrna1.cds6;Name=FBgn0035903.1;Parent=FBgn0035903.1.mrna1;Target=FBgn0035903.1 1668 1768 +
Chr1	stalkie_big_nohaplotig	CDS	12108283	12108374	98	-	1	ID=FBgn0035903.1.mrna1.cds7;Name=FBgn0035903.1;Parent=FBgn0035903.1.mrna1;Target=FBgn0035903.1 1769 1860 +
Chr1	stalkie_big_nohaplotig	mRNA	12103666	12105025	.	+	.	ID=FBgn0035907.1.mrna1;Name=FBgn0035907.1;Parent=FBgn0035907.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=769;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	12103666	12103705	100	+	.	ID=FBgn0035907.1.mrna1.exon1;Name=FBgn0035907.1;Parent=FBgn0035907.1.mrna1;Target=FBgn0035907.1 1 40 +
Chr1	stalkie_big_nohaplotig	exon	12104016	12104596	99	+	.	ID=FBgn0035907.1.mrna1.exon2;Name=FBgn0035907.1;Parent=FBgn0035907.1.mrna1;Target=FBgn0035907.1 41 621 +
Chr1	stalkie_big_nohaplotig	exon	12104649	12104770	100	+	.	ID=FBgn0035907.1.mrna1.exon3;Name=FBgn0035907.1;Parent=FBgn0035907.1.mrna1;Target=FBgn0035907.1 622 743 +
Chr1	stalkie_big_nohaplotig	exon	12104998	12105025	100	+	.	ID=FBgn0035907.1.mrna1.exon4;Name=FBgn0035907.1;Parent=FBgn0035907.1.mrna1;Target=FBgn0035907.1 744 771 +
Chr1	stalkie_big_nohaplotig	CDS	12103666	12103705	100	+	0	ID=FBgn0035907.1.mrna1.cds1;Name=FBgn0035907.1;Parent=FBgn0035907.1.mrna1;Target=FBgn0035907.1 1 40 +
Chr1	stalkie_big_nohaplotig	CDS	12104016	12104596	99	+	1	ID=FBgn0035907.1.mrna1.cds2;Name=FBgn0035907.1;Parent=FBgn0035907.1.mrna1;Target=FBgn0035907.1 41 621 +
Chr1	stalkie_big_nohaplotig	CDS	12104649	12104770	100	+	0	ID=FBgn0035907.1.mrna1.cds3;Name=FBgn0035907.1;Parent=FBgn0035907.1.mrna1;Target=FBgn0035907.1 622 743 +
Chr1	stalkie_big_nohaplotig	CDS	12104998	12105025	100	+	2	ID=FBgn0035907.1.mrna1.cds4;Name=FBgn0035907.1;Parent=FBgn0035907.1.mrna1;Target=FBgn0035907.1 744 771 +
Chr1	stalkie_big_nohaplotig	mRNA	12251311	12253387	.	-	.	ID=FBgn0035909.1.mrna1;Name=FBgn0035909.1;Parent=FBgn0035909.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1620;mismatches=6;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	12253132	12253387	100	-	.	ID=FBgn0035909.1.mrna1.exon1;Name=FBgn0035909.1;Parent=FBgn0035909.1.mrna1;Target=FBgn0035909.1 1 256 +
Chr1	stalkie_big_nohaplotig	exon	12252151	12252875	99	-	.	ID=FBgn0035909.1.mrna1.exon2;Name=FBgn0035909.1;Parent=FBgn0035909.1.mrna1;Target=FBgn0035909.1 257 981 +
Chr1	stalkie_big_nohaplotig	exon	12251592	12252079	100	-	.	ID=FBgn0035909.1.mrna1.exon3;Name=FBgn0035909.1;Parent=FBgn0035909.1.mrna1;Target=FBgn0035909.1 982 1469 +
Chr1	stalkie_big_nohaplotig	exon	12251408	12251530	100	-	.	ID=FBgn0035909.1.mrna1.exon4;Name=FBgn0035909.1;Parent=FBgn0035909.1.mrna1;Target=FBgn0035909.1 1470 1592 +
Chr1	stalkie_big_nohaplotig	exon	12251311	12251344	100	-	.	ID=FBgn0035909.1.mrna1.exon5;Name=FBgn0035909.1;Parent=FBgn0035909.1.mrna1;Target=FBgn0035909.1 1593 1626 +
Chr1	stalkie_big_nohaplotig	CDS	12253132	12253387	100	-	0	ID=FBgn0035909.1.mrna1.cds1;Name=FBgn0035909.1;Parent=FBgn0035909.1.mrna1;Target=FBgn0035909.1 1 256 +
Chr1	stalkie_big_nohaplotig	CDS	12252151	12252875	99	-	1	ID=FBgn0035909.1.mrna1.cds2;Name=FBgn0035909.1;Parent=FBgn0035909.1.mrna1;Target=FBgn0035909.1 257 981 +
Chr1	stalkie_big_nohaplotig	CDS	12251592	12252079	100	-	0	ID=FBgn0035909.1.mrna1.cds3;Name=FBgn0035909.1;Parent=FBgn0035909.1.mrna1;Target=FBgn0035909.1 982 1469 +
Chr1	stalkie_big_nohaplotig	CDS	12251408	12251530	100	-	2	ID=FBgn0035909.1.mrna1.cds4;Name=FBgn0035909.1;Parent=FBgn0035909.1.mrna1;Target=FBgn0035909.1 1470 1592 +
Chr1	stalkie_big_nohaplotig	CDS	12251311	12251344	100	-	2	ID=FBgn0035909.1.mrna1.cds5;Name=FBgn0035909.1;Parent=FBgn0035909.1.mrna1;Target=FBgn0035909.1 1593 1626 +
Chr1	stalkie_big_nohaplotig	mRNA	11935763	11943544	.	-	.	ID=FBgn0052380.1.mrna1;Name=FBgn0052380.1;Parent=FBgn0052380.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2132;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	11942998	11943544	100	-	.	ID=FBgn0052380.1.mrna1.exon1;Name=FBgn0052380.1;Parent=FBgn0052380.1.mrna1;Target=FBgn0052380.1 1 547 +
Chr1	stalkie_big_nohaplotig	exon	11937343	11937688	100	-	.	ID=FBgn0052380.1.mrna1.exon2;Name=FBgn0052380.1;Parent=FBgn0052380.1.mrna1;Target=FBgn0052380.1 548 893 +
Chr1	stalkie_big_nohaplotig	exon	11937126	11937283	100	-	.	ID=FBgn0052380.1.mrna1.exon3;Name=FBgn0052380.1;Parent=FBgn0052380.1.mrna1;Target=FBgn0052380.1 894 1051 +
Chr1	stalkie_big_nohaplotig	exon	11936808	11936974	100	-	.	ID=FBgn0052380.1.mrna1.exon4;Name=FBgn0052380.1;Parent=FBgn0052380.1.mrna1;Target=FBgn0052380.1 1052 1218 +
Chr1	stalkie_big_nohaplotig	exon	11936383	11936743	100	-	.	ID=FBgn0052380.1.mrna1.exon5;Name=FBgn0052380.1;Parent=FBgn0052380.1.mrna1;Target=FBgn0052380.1 1219 1579 +
Chr1	stalkie_big_nohaplotig	exon	11935763	11936316	99	-	.	ID=FBgn0052380.1.mrna1.exon6;Name=FBgn0052380.1;Parent=FBgn0052380.1.mrna1;Target=FBgn0052380.1 1580 2133 +
Chr1	stalkie_big_nohaplotig	CDS	11942998	11943544	100	-	0	ID=FBgn0052380.1.mrna1.cds1;Name=FBgn0052380.1;Parent=FBgn0052380.1.mrna1;Target=FBgn0052380.1 1 547 +
Chr1	stalkie_big_nohaplotig	CDS	11937343	11937688	100	-	1	ID=FBgn0052380.1.mrna1.cds2;Name=FBgn0052380.1;Parent=FBgn0052380.1.mrna1;Target=FBgn0052380.1 548 893 +
Chr1	stalkie_big_nohaplotig	CDS	11937126	11937283	100	-	2	ID=FBgn0052380.1.mrna1.cds3;Name=FBgn0052380.1;Parent=FBgn0052380.1.mrna1;Target=FBgn0052380.1 894 1051 +
Chr1	stalkie_big_nohaplotig	CDS	11936808	11936974	100	-	1	ID=FBgn0052380.1.mrna1.cds4;Name=FBgn0052380.1;Parent=FBgn0052380.1.mrna1;Target=FBgn0052380.1 1052 1218 +
Chr1	stalkie_big_nohaplotig	CDS	11936383	11936743	100	-	0	ID=FBgn0052380.1.mrna1.cds5;Name=FBgn0052380.1;Parent=FBgn0052380.1.mrna1;Target=FBgn0052380.1 1219 1579 +
Chr1	stalkie_big_nohaplotig	CDS	11935763	11936316	99	-	1	ID=FBgn0052380.1.mrna1.cds6;Name=FBgn0052380.1;Parent=FBgn0052380.1.mrna1;Target=FBgn0052380.1 1580 2133 +
Chr1	stalkie_big_nohaplotig	mRNA	13063408	13065052	.	+	.	ID=FBgn0035644.1.mrna1;Name=FBgn0035644.1;Parent=FBgn0035644.1.path1;Dir=sensecoverage=100.0;identity=99.5;matches=1576;mismatches=8;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	13063408	13064122	99	+	.	ID=FBgn0035644.1.mrna1.exon1;Name=FBgn0035644.1;Parent=FBgn0035644.1.mrna1;Target=FBgn0035644.1 1 715 +
Chr1	stalkie_big_nohaplotig	exon	13064184	13065052	99	+	.	ID=FBgn0035644.1.mrna1.exon2;Name=FBgn0035644.1;Parent=FBgn0035644.1.mrna1;Target=FBgn0035644.1 716 1584 +
Chr1	stalkie_big_nohaplotig	CDS	13063408	13064122	99	+	0	ID=FBgn0035644.1.mrna1.cds1;Name=FBgn0035644.1;Parent=FBgn0035644.1.mrna1;Target=FBgn0035644.1 1 715 +
Chr1	stalkie_big_nohaplotig	CDS	13064184	13065052	99	+	1	ID=FBgn0035644.1.mrna1.cds2;Name=FBgn0035644.1;Parent=FBgn0035644.1.mrna1;Target=FBgn0035644.1 716 1584 +
Chr1	stalkie_big_nohaplotig	mRNA	13022912	13026834	.	+	.	ID=FBgn0053056.1.mrna1;Name=FBgn0053056.1;Parent=FBgn0053056.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=937;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	13022912	13023220	99	+	.	ID=FBgn0053056.1.mrna1.exon1;Name=FBgn0053056.1;Parent=FBgn0053056.1.mrna1;Target=FBgn0053056.1 1 309 +
Chr1	stalkie_big_nohaplotig	exon	13026044	13026193	100	+	.	ID=FBgn0053056.1.mrna1.exon2;Name=FBgn0053056.1;Parent=FBgn0053056.1.mrna1;Target=FBgn0053056.1 310 459 +
Chr1	stalkie_big_nohaplotig	exon	13026288	13026590	99	+	.	ID=FBgn0053056.1.mrna1.exon3;Name=FBgn0053056.1;Parent=FBgn0053056.1.mrna1;Target=FBgn0053056.1 460 762 +
Chr1	stalkie_big_nohaplotig	exon	13026658	13026834	100	+	.	ID=FBgn0053056.1.mrna1.exon4;Name=FBgn0053056.1;Parent=FBgn0053056.1.mrna1;Target=FBgn0053056.1 763 939 +
Chr1	stalkie_big_nohaplotig	CDS	13022912	13023220	99	+	0	ID=FBgn0053056.1.mrna1.cds1;Name=FBgn0053056.1;Parent=FBgn0053056.1.mrna1;Target=FBgn0053056.1 1 309 +
Chr1	stalkie_big_nohaplotig	CDS	13026044	13026193	100	+	0	ID=FBgn0053056.1.mrna1.cds2;Name=FBgn0053056.1;Parent=FBgn0053056.1.mrna1;Target=FBgn0053056.1 310 459 +
Chr1	stalkie_big_nohaplotig	CDS	13026288	13026590	99	+	0	ID=FBgn0053056.1.mrna1.cds3;Name=FBgn0053056.1;Parent=FBgn0053056.1.mrna1;Target=FBgn0053056.1 460 762 +
Chr1	stalkie_big_nohaplotig	CDS	13026658	13026834	100	+	0	ID=FBgn0053056.1.mrna1.cds4;Name=FBgn0053056.1;Parent=FBgn0053056.1.mrna1;Target=FBgn0053056.1 763 939 +
Chr1	stalkie_big_nohaplotig	mRNA	12536619	12538453	.	+	.	ID=FBgn0035470.1.mrna1;Name=FBgn0035470.1;Parent=FBgn0035470.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1464;mismatches=6;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	12536619	12536708	100	+	.	ID=FBgn0035470.1.mrna1.exon1;Name=FBgn0035470.1;Parent=FBgn0035470.1.mrna1;Target=FBgn0035470.1 1 90 +
Chr1	stalkie_big_nohaplotig	exon	12536808	12536905	100	+	.	ID=FBgn0035470.1.mrna1.exon2;Name=FBgn0035470.1;Parent=FBgn0035470.1.mrna1;Target=FBgn0035470.1 91 188 +
Chr1	stalkie_big_nohaplotig	exon	12536977	12537295	99	+	.	ID=FBgn0035470.1.mrna1.exon3;Name=FBgn0035470.1;Parent=FBgn0035470.1.mrna1;Target=FBgn0035470.1 189 507 +
Chr1	stalkie_big_nohaplotig	exon	12537352	12537527	99	+	.	ID=FBgn0035470.1.mrna1.exon4;Name=FBgn0035470.1;Parent=FBgn0035470.1.mrna1;Target=FBgn0035470.1 508 683 +
Chr1	stalkie_big_nohaplotig	exon	12537604	12537887	99	+	.	ID=FBgn0035470.1.mrna1.exon5;Name=FBgn0035470.1;Parent=FBgn0035470.1.mrna1;Target=FBgn0035470.1 684 967 +
Chr1	stalkie_big_nohaplotig	exon	12537951	12538453	99	+	.	ID=FBgn0035470.1.mrna1.exon6;Name=FBgn0035470.1;Parent=FBgn0035470.1.mrna1;Target=FBgn0035470.1 968 1470 +
Chr1	stalkie_big_nohaplotig	CDS	12536619	12536708	100	+	0	ID=FBgn0035470.1.mrna1.cds1;Name=FBgn0035470.1;Parent=FBgn0035470.1.mrna1;Target=FBgn0035470.1 1 90 +
Chr1	stalkie_big_nohaplotig	CDS	12536808	12536905	100	+	0	ID=FBgn0035470.1.mrna1.cds2;Name=FBgn0035470.1;Parent=FBgn0035470.1.mrna1;Target=FBgn0035470.1 91 188 +
Chr1	stalkie_big_nohaplotig	CDS	12536977	12537295	99	+	2	ID=FBgn0035470.1.mrna1.cds3;Name=FBgn0035470.1;Parent=FBgn0035470.1.mrna1;Target=FBgn0035470.1 189 507 +
Chr1	stalkie_big_nohaplotig	CDS	12537352	12537527	99	+	0	ID=FBgn0035470.1.mrna1.cds4;Name=FBgn0035470.1;Parent=FBgn0035470.1.mrna1;Target=FBgn0035470.1 508 683 +
Chr1	stalkie_big_nohaplotig	CDS	12537604	12537887	99	+	2	ID=FBgn0035470.1.mrna1.cds5;Name=FBgn0035470.1;Parent=FBgn0035470.1.mrna1;Target=FBgn0035470.1 684 967 +
Chr1	stalkie_big_nohaplotig	CDS	12537951	12538453	99	+	1	ID=FBgn0035470.1.mrna1.cds6;Name=FBgn0035470.1;Parent=FBgn0035470.1.mrna1;Target=FBgn0035470.1 968 1470 +
Chr2	stalkie_big_nohaplotig	mRNA	709236	709749	.	-	.	ID=FBgn0030050.2.mrna1;Name=FBgn0030050.2;Parent=FBgn0030050.2.path1;Dir=sensecoverage=100.0;identity=100.0;matches=453;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	709660	709749	100	-	.	ID=FBgn0030050.2.mrna1.exon1;Name=FBgn0030050.2;Parent=FBgn0030050.2.mrna1;Target=FBgn0030050.2 1 90 +
Chr2	stalkie_big_nohaplotig	exon	709236	709598	100	-	.	ID=FBgn0030050.2.mrna1.exon2;Name=FBgn0030050.2;Parent=FBgn0030050.2.mrna1;Target=FBgn0030050.2 91 453 +
Chr2	stalkie_big_nohaplotig	CDS	709660	709749	100	-	0	ID=FBgn0030050.2.mrna1.cds1;Name=FBgn0030050.2;Parent=FBgn0030050.2.mrna1;Target=FBgn0030050.2 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	709236	709598	100	-	0	ID=FBgn0030050.2.mrna1.cds2;Name=FBgn0030050.2;Parent=FBgn0030050.2.mrna1;Target=FBgn0030050.2 91 453 +
Chr1	stalkie_big_nohaplotig	mRNA	9568026	9570270	.	+	.	ID=FBgn0005683.1.mrna1;Name=FBgn0005683.1;Parent=FBgn0005683.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1998;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	9568026	9568178	100	+	.	ID=FBgn0005683.1.mrna1.exon1;Name=FBgn0005683.1;Parent=FBgn0005683.1.mrna1;Target=FBgn0005683.1 1 153 +
Chr1	stalkie_big_nohaplotig	exon	9568371	9568989	100	+	.	ID=FBgn0005683.1.mrna1.exon2;Name=FBgn0005683.1;Parent=FBgn0005683.1.mrna1;Target=FBgn0005683.1 154 772 +
Chr1	stalkie_big_nohaplotig	exon	9569045	9570270	100	+	.	ID=FBgn0005683.1.mrna1.exon3;Name=FBgn0005683.1;Parent=FBgn0005683.1.mrna1;Target=FBgn0005683.1 773 1998 +
Chr1	stalkie_big_nohaplotig	CDS	9568026	9568178	100	+	0	ID=FBgn0005683.1.mrna1.cds1;Name=FBgn0005683.1;Parent=FBgn0005683.1.mrna1;Target=FBgn0005683.1 1 153 +
Chr1	stalkie_big_nohaplotig	CDS	9568371	9568989	100	+	0	ID=FBgn0005683.1.mrna1.cds2;Name=FBgn0005683.1;Parent=FBgn0005683.1.mrna1;Target=FBgn0005683.1 154 772 +
Chr1	stalkie_big_nohaplotig	CDS	9569045	9570270	100	+	1	ID=FBgn0005683.1.mrna1.cds3;Name=FBgn0005683.1;Parent=FBgn0005683.1.mrna1;Target=FBgn0005683.1 773 1998 +
Chr1	stalkie_big_nohaplotig	mRNA	9543048	9564161	.	+	.	ID=FBgn0035253.1.mrna1;Name=FBgn0035253.1;Parent=FBgn0035253.1.path1;Dir=sensecoverage=100.0;identity=99.4;matches=3462;mismatches=8;indels=12;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	9543048	9543300	100	+	.	ID=FBgn0035253.1.mrna1.exon1;Name=FBgn0035253.1;Parent=FBgn0035253.1.mrna1;Target=FBgn0035253.1 2 254 +
Chr1	stalkie_big_nohaplotig	exon	9544230	9544331	100	+	.	ID=FBgn0035253.1.mrna1.exon2;Name=FBgn0035253.1;Parent=FBgn0035253.1.mrna1;Target=FBgn0035253.1 255 356 +
Chr1	stalkie_big_nohaplotig	exon	9549569	9549940	98	+	.	ID=FBgn0035253.1.mrna1.exon3;Name=FBgn0035253.1;Parent=FBgn0035253.1.mrna1;Target=FBgn0035253.1 357 728 +
Chr1	stalkie_big_nohaplotig	exon	9550011	9550073	96	+	.	ID=FBgn0035253.1.mrna1.exon4;Name=FBgn0035253.1;Parent=FBgn0035253.1.mrna1;Target=FBgn0035253.1 729 791 +
Chr1	stalkie_big_nohaplotig	exon	9555938	9556085	99	+	.	ID=FBgn0035253.1.mrna1.exon5;Name=FBgn0035253.1;Parent=FBgn0035253.1.mrna1;Target=FBgn0035253.1 792 939 +
Chr1	stalkie_big_nohaplotig	exon	9557602	9557663	100	+	.	ID=FBgn0035253.1.mrna1.exon6;Name=FBgn0035253.1;Parent=FBgn0035253.1.mrna1;Target=FBgn0035253.1 940 1001 +
Chr1	stalkie_big_nohaplotig	exon	9557724	9559647	100	+	.	ID=FBgn0035253.1.mrna1.exon7;Name=FBgn0035253.1;Parent=FBgn0035253.1.mrna1;Target=FBgn0035253.1 1002 2925 +
Chr1	stalkie_big_nohaplotig	exon	9560614	9560798	93	+	.	ID=FBgn0035253.1.mrna1.exon8;Name=FBgn0035253.1;Parent=FBgn0035253.1.mrna1;Target=FBgn0035253.1 2926 3110 +
Chr1	stalkie_big_nohaplotig	exon	9560889	9561017	100	+	.	ID=FBgn0035253.1.mrna1.exon9;Name=FBgn0035253.1;Parent=FBgn0035253.1.mrna1;Target=FBgn0035253.1 3111 3239 +
Chr1	stalkie_big_nohaplotig	exon	9563206	9563301	100	+	.	ID=FBgn0035253.1.mrna1.exon10;Name=FBgn0035253.1;Parent=FBgn0035253.1.mrna1;Target=FBgn0035253.1 3240 3335 +
Chr1	stalkie_big_nohaplotig	exon	9564020	9564161	100	+	.	ID=FBgn0035253.1.mrna1.exon11;Name=FBgn0035253.1;Parent=FBgn0035253.1.mrna1;Target=FBgn0035253.1 3336 3477 +
Chr1	stalkie_big_nohaplotig	CDS	9543050	9543300	100	+	0	ID=FBgn0035253.1.mrna1.cds1;Name=FBgn0035253.1;Parent=FBgn0035253.1.mrna1;Target=FBgn0035253.1 4 254 +
Chr1	stalkie_big_nohaplotig	CDS	9544230	9544331	100	+	2	ID=FBgn0035253.1.mrna1.cds2;Name=FBgn0035253.1;Parent=FBgn0035253.1.mrna1;Target=FBgn0035253.1 255 356 +
Chr1	stalkie_big_nohaplotig	CDS	9549569	9549940	98	+	2	ID=FBgn0035253.1.mrna1.cds3;Name=FBgn0035253.1;Parent=FBgn0035253.1.mrna1;Target=FBgn0035253.1 357 728 +
Chr1	stalkie_big_nohaplotig	CDS	9550011	9550073	96	+	2	ID=FBgn0035253.1.mrna1.cds4;Name=FBgn0035253.1;Parent=FBgn0035253.1.mrna1;Target=FBgn0035253.1 729 791 +
Chr1	stalkie_big_nohaplotig	CDS	9555938	9556085	99	+	2	ID=FBgn0035253.1.mrna1.cds5;Name=FBgn0035253.1;Parent=FBgn0035253.1.mrna1;Target=FBgn0035253.1 792 939 +
Chr1	stalkie_big_nohaplotig	CDS	9557602	9557663	100	+	0	ID=FBgn0035253.1.mrna1.cds6;Name=FBgn0035253.1;Parent=FBgn0035253.1.mrna1;Target=FBgn0035253.1 940 1001 +
Chr1	stalkie_big_nohaplotig	CDS	9557724	9559647	100	+	2	ID=FBgn0035253.1.mrna1.cds7;Name=FBgn0035253.1;Parent=FBgn0035253.1.mrna1;Target=FBgn0035253.1 1002 2925 +
Chr1	stalkie_big_nohaplotig	CDS	9560614	9560798	93	+	0	ID=FBgn0035253.1.mrna1.cds8;Name=FBgn0035253.1;Parent=FBgn0035253.1.mrna1;Target=FBgn0035253.1 2926 3110 +
Chr1	stalkie_big_nohaplotig	CDS	9560889	9561017	100	+	2	ID=FBgn0035253.1.mrna1.cds9;Name=FBgn0035253.1;Parent=FBgn0035253.1.mrna1;Target=FBgn0035253.1 3111 3239 +
Chr1	stalkie_big_nohaplotig	CDS	9563206	9563301	100	+	2	ID=FBgn0035253.1.mrna1.cds10;Name=FBgn0035253.1;Parent=FBgn0035253.1.mrna1;Target=FBgn0035253.1 3240 3335 +
Chr1	stalkie_big_nohaplotig	CDS	9564020	9564161	100	+	2	ID=FBgn0035253.1.mrna1.cds11;Name=FBgn0035253.1;Parent=FBgn0035253.1.mrna1;Target=FBgn0035253.1 3336 3477 +
Chr1	stalkie_big_nohaplotig	mRNA	9989124	9989913	.	+	.	ID=FBgn0035325.1.mrna1;Name=FBgn0035325.1;Parent=FBgn0035325.1.path1;Dir=sensecoverage=100.0;identity=99.4;matches=677;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	9989124	9989147	95	+	.	ID=FBgn0035325.1.mrna1.exon1;Name=FBgn0035325.1;Parent=FBgn0035325.1.mrna1;Target=FBgn0035325.1 1 24 +
Chr1	stalkie_big_nohaplotig	exon	9989257	9989913	99	+	.	ID=FBgn0035325.1.mrna1.exon2;Name=FBgn0035325.1;Parent=FBgn0035325.1.mrna1;Target=FBgn0035325.1 25 681 +
Chr1	stalkie_big_nohaplotig	CDS	9989124	9989147	95	+	0	ID=FBgn0035325.1.mrna1.cds1;Name=FBgn0035325.1;Parent=FBgn0035325.1.mrna1;Target=FBgn0035325.1 1 24 +
Chr1	stalkie_big_nohaplotig	CDS	9989257	9989913	99	+	0	ID=FBgn0035325.1.mrna1.cds2;Name=FBgn0035325.1;Parent=FBgn0035325.1.mrna1;Target=FBgn0035325.1 25 681 +
Chr1	stalkie_big_nohaplotig	mRNA	9939799	9942911	.	+	.	ID=FBgn0035432.1.mrna1;Name=FBgn0035432.1;Parent=FBgn0035432.1.path1;Dir=sensecoverage=100.0;identity=99.4;matches=1172;mismatches=6;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	9939799	9939821	100	+	.	ID=FBgn0035432.1.mrna1.exon1;Name=FBgn0035432.1;Parent=FBgn0035432.1.mrna1;Target=FBgn0035432.1 1 23 +
Chr1	stalkie_big_nohaplotig	exon	9940668	9940792	99	+	.	ID=FBgn0035432.1.mrna1.exon2;Name=FBgn0035432.1;Parent=FBgn0035432.1.mrna1;Target=FBgn0035432.1 24 149 +
Chr1	stalkie_big_nohaplotig	exon	9940852	9940949	100	+	.	ID=FBgn0035432.1.mrna1.exon3;Name=FBgn0035432.1;Parent=FBgn0035432.1.mrna1;Target=FBgn0035432.1 150 247 +
Chr1	stalkie_big_nohaplotig	exon	9941018	9941142	100	+	.	ID=FBgn0035432.1.mrna1.exon4;Name=FBgn0035432.1;Parent=FBgn0035432.1.mrna1;Target=FBgn0035432.1 248 372 +
Chr1	stalkie_big_nohaplotig	exon	9941225	9941353	98	+	.	ID=FBgn0035432.1.mrna1.exon5;Name=FBgn0035432.1;Parent=FBgn0035432.1.mrna1;Target=FBgn0035432.1 373 501 +
Chr1	stalkie_big_nohaplotig	exon	9941434	9941580	99	+	.	ID=FBgn0035432.1.mrna1.exon6;Name=FBgn0035432.1;Parent=FBgn0035432.1.mrna1;Target=FBgn0035432.1 502 648 +
Chr1	stalkie_big_nohaplotig	exon	9941647	9941759	100	+	.	ID=FBgn0035432.1.mrna1.exon7;Name=FBgn0035432.1;Parent=FBgn0035432.1.mrna1;Target=FBgn0035432.1 649 761 +
Chr1	stalkie_big_nohaplotig	exon	9942361	9942595	99	+	.	ID=FBgn0035432.1.mrna1.exon8;Name=FBgn0035432.1;Parent=FBgn0035432.1.mrna1;Target=FBgn0035432.1 762 996 +
Chr1	stalkie_big_nohaplotig	exon	9942663	9942750	100	+	.	ID=FBgn0035432.1.mrna1.exon9;Name=FBgn0035432.1;Parent=FBgn0035432.1.mrna1;Target=FBgn0035432.1 997 1084 +
Chr1	stalkie_big_nohaplotig	exon	9942817	9942911	98	+	.	ID=FBgn0035432.1.mrna1.exon10;Name=FBgn0035432.1;Parent=FBgn0035432.1.mrna1;Target=FBgn0035432.1 1085 1179 +
Chr1	stalkie_big_nohaplotig	CDS	9939801	9939821	100	+	0	ID=FBgn0035432.1.mrna1.cds1;Name=FBgn0035432.1;Parent=FBgn0035432.1.mrna1;Target=FBgn0035432.1 3 23 +
Chr1	stalkie_big_nohaplotig	CDS	9940668	9940789	99	+	0	ID=FBgn0035432.1.mrna1.cds2;Name=FBgn0035432.1;Parent=FBgn0035432.1.mrna1;Target=FBgn0035432.1 24 146 +
Chr1	stalkie_big_nohaplotig	mRNA	9876221	9877379	.	+	.	ID=FBgn0035849.1.mrna1;Name=FBgn0035849.1;Parent=FBgn0035849.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1085;mismatches=0;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	9876221	9876402	99	+	.	ID=FBgn0035849.1.mrna1.exon1;Name=FBgn0035849.1;Parent=FBgn0035849.1.mrna1;Target=FBgn0035849.1 1 183 +
Chr1	stalkie_big_nohaplotig	exon	9876477	9877379	100	+	.	ID=FBgn0035849.1.mrna1.exon2;Name=FBgn0035849.1;Parent=FBgn0035849.1.mrna1;Target=FBgn0035849.1 184 1086 +
Chr1	stalkie_big_nohaplotig	CDS	9876223	9876275	98	+	0	ID=FBgn0035849.1.mrna1.cds1;Name=FBgn0035849.1;Parent=FBgn0035849.1.mrna1;Target=FBgn0035849.1 3 56 +
Chr1	stalkie_big_nohaplotig	mRNA	9490983	9493121	.	-	.	ID=FBgn0041150.3.mrna1;Name=FBgn0041150.3;Parent=FBgn0041150.3.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=2139;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	9490983	9493121	100	-	.	ID=FBgn0041150.3.mrna1.exon1;Name=FBgn0041150.3;Parent=FBgn0041150.3.mrna1;Target=FBgn0041150.3 2139 1 .
Chr1	stalkie_big_nohaplotig	CDS	9490983	9493121	100	-	0	ID=FBgn0041150.3.mrna1.cds1;Name=FBgn0041150.3;Parent=FBgn0041150.3.mrna1;Target=FBgn0041150.3 2139 1 .
Chr1	stalkie_big_nohaplotig	mRNA	10155266	10156855	.	-	.	ID=ORF733.mrna1;Name=ORF733;Parent=ORF733.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1477;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	10156607	10156855	99	-	.	ID=ORF733.mrna1.exon1;Name=ORF733;Parent=ORF733.mrna1;Target=ORF733 1 249 +
Chr1	stalkie_big_nohaplotig	exon	10156395	10156550	100	-	.	ID=ORF733.mrna1.exon2;Name=ORF733;Parent=ORF733.mrna1;Target=ORF733 250 405 +
Chr1	stalkie_big_nohaplotig	exon	10155266	10156339	99	-	.	ID=ORF733.mrna1.exon3;Name=ORF733;Parent=ORF733.mrna1;Target=ORF733 406 1479 +
Chr1	stalkie_big_nohaplotig	CDS	10156607	10156855	99	-	0	ID=ORF733.mrna1.cds1;Name=ORF733;Parent=ORF733.mrna1;Target=ORF733 1 249 +
Chr1	stalkie_big_nohaplotig	CDS	10156395	10156550	100	-	0	ID=ORF733.mrna1.cds2;Name=ORF733;Parent=ORF733.mrna1;Target=ORF733 250 405 +
Chr1	stalkie_big_nohaplotig	CDS	10155266	10156339	99	-	0	ID=ORF733.mrna1.cds3;Name=ORF733;Parent=ORF733.mrna1;Target=ORF733 406 1479 +
Chr1	stalkie_big_nohaplotig	mRNA	10451517	10477750	.	+	.	ID=FBgn0000567.1.mrna1;Name=FBgn0000567.1;Parent=FBgn0000567.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1940;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	10451517	10452177	99	+	.	ID=FBgn0000567.1.mrna1.exon1;Name=FBgn0000567.1;Parent=FBgn0000567.1.mrna1;Target=FBgn0000567.1 1 661 +
Chr1	stalkie_big_nohaplotig	exon	10469469	10469783	100	+	.	ID=FBgn0000567.1.mrna1.exon2;Name=FBgn0000567.1;Parent=FBgn0000567.1.mrna1;Target=FBgn0000567.1 662 976 +
Chr1	stalkie_big_nohaplotig	exon	10469912	10470127	100	+	.	ID=FBgn0000567.1.mrna1.exon3;Name=FBgn0000567.1;Parent=FBgn0000567.1.mrna1;Target=FBgn0000567.1 977 1192 +
Chr1	stalkie_big_nohaplotig	exon	10476999	10477750	99	+	.	ID=FBgn0000567.1.mrna1.exon4;Name=FBgn0000567.1;Parent=FBgn0000567.1.mrna1;Target=FBgn0000567.1 1193 1944 +
Chr1	stalkie_big_nohaplotig	CDS	10451517	10452177	99	+	0	ID=FBgn0000567.1.mrna1.cds1;Name=FBgn0000567.1;Parent=FBgn0000567.1.mrna1;Target=FBgn0000567.1 1 661 +
Chr1	stalkie_big_nohaplotig	CDS	10469469	10469783	100	+	1	ID=FBgn0000567.1.mrna1.cds2;Name=FBgn0000567.1;Parent=FBgn0000567.1.mrna1;Target=FBgn0000567.1 662 976 +
Chr1	stalkie_big_nohaplotig	CDS	10469912	10470127	100	+	1	ID=FBgn0000567.1.mrna1.cds3;Name=FBgn0000567.1;Parent=FBgn0000567.1.mrna1;Target=FBgn0000567.1 977 1192 +
Chr1	stalkie_big_nohaplotig	CDS	10476999	10477750	99	+	1	ID=FBgn0000567.1.mrna1.cds4;Name=FBgn0000567.1;Parent=FBgn0000567.1.mrna1;Target=FBgn0000567.1 1193 1944 +
Chr1	stalkie_big_nohaplotig	mRNA	9209738	9216747	.	+	.	ID=FBgn0035237.1.mrna1;Name=FBgn0035237.1;Parent=FBgn0035237.1.path1;Dir=sensecoverage=99.5;identity=99.4;matches=6405;mismatches=39;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	9209738	9214146	99	+	.	ID=FBgn0035237.1.mrna1.exon1;Name=FBgn0035237.1;Parent=FBgn0035237.1.mrna1;Target=FBgn0035237.1 29 4437 +
Chr1	stalkie_big_nohaplotig	exon	9214639	9215398	98	+	.	ID=FBgn0035237.1.mrna1.exon2;Name=FBgn0035237.1;Parent=FBgn0035237.1.mrna1;Target=FBgn0035237.1 4438 5197 +
Chr1	stalkie_big_nohaplotig	exon	9215473	9216747	99	+	.	ID=FBgn0035237.1.mrna1.exon3;Name=FBgn0035237.1;Parent=FBgn0035237.1.mrna1;Target=FBgn0035237.1 5198 6472 +
Chr1	stalkie_big_nohaplotig	CDS	9209740	9214146	99	+	0	ID=FBgn0035237.1.mrna1.cds1;Name=FBgn0035237.1;Parent=FBgn0035237.1.mrna1;Target=FBgn0035237.1 31 4437 +
Chr1	stalkie_big_nohaplotig	CDS	9214639	9215398	98	+	0	ID=FBgn0035237.1.mrna1.cds2;Name=FBgn0035237.1;Parent=FBgn0035237.1.mrna1;Target=FBgn0035237.1 4438 5197 +
Chr1	stalkie_big_nohaplotig	CDS	9215473	9216746	99	+	1	ID=FBgn0035237.1.mrna1.cds3;Name=FBgn0035237.1;Parent=FBgn0035237.1.mrna1;Target=FBgn0035237.1 5198 6471 +
Chr1	stalkie_big_nohaplotig	mRNA	51731264	51743603	.	+	.	ID=FBgn0036837.2.mrna1;Name=FBgn0036837.2;Parent=FBgn0036837.2.path1;Dir=sensecoverage=100.0;identity=99.1;matches=2129;mismatches=18;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	51731264	51731490	98	+	.	ID=FBgn0036837.2.mrna1.exon1;Name=FBgn0036837.2;Parent=FBgn0036837.2.mrna1;Target=FBgn0036837.2 1 228 +
Chr1	stalkie_big_nohaplotig	exon	51741684	51743603	99	+	.	ID=FBgn0036837.2.mrna1.exon2;Name=FBgn0036837.2;Parent=FBgn0036837.2.mrna1;Target=FBgn0036837.2 229 2148 +
Chr1	stalkie_big_nohaplotig	CDS	51731266	51731333	98	+	0	ID=FBgn0036837.2.mrna1.cds1;Name=FBgn0036837.2;Parent=FBgn0036837.2.mrna1;Target=FBgn0036837.2 3 71 +
Chr2	stalkie_big_nohaplotig	mRNA	20892925	20894184	.	-	.	ID=FBgn0039711.2.mrna7;Name=FBgn0039711.2;Parent=FBgn0039711.2.path7;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1255;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	20892925	20894184	99	-	.	ID=FBgn0039711.2.mrna7.exon1;Name=FBgn0039711.2;Parent=FBgn0039711.2.mrna7;Target=FBgn0039711.2 1260 1 .
Chr2	stalkie_big_nohaplotig	CDS	20892925	20893671	99	-	0	ID=FBgn0039711.2.mrna7.cds1;Name=FBgn0039711.2;Parent=FBgn0039711.2.mrna7;Target=FBgn0039711.2 1260 514 .
Chr1	stalkie_big_nohaplotig	mRNA	112078357	112081130	.	-	.	ID=FBgn0030798.1.mrna1;Name=FBgn0030798.1;Parent=FBgn0030798.1.path1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=2766;mismatches=8;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	112078357	112081130	99	-	.	ID=FBgn0030798.1.mrna1.exon1;Name=FBgn0030798.1;Parent=FBgn0030798.1.mrna1;Target=FBgn0030798.1 2775 1 .
Chr1	stalkie_big_nohaplotig	CDS	112081085	112081128	97	-	0	ID=FBgn0030798.1.mrna1.cds1;Name=FBgn0030798.1;Parent=FBgn0030798.1.mrna1;Target=FBgn0030798.1 47 3 .
Chr1	stalkie_big_nohaplotig	mRNA	166131802	166157463	.	-	.	ID=FBgn0052635.1.mrna1;Name=FBgn0052635.1;Parent=FBgn0052635.1.path1;Dir=sensecoverage=100.0;identity=99.3;matches=2437;mismatches=2;indels=15;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	166157343	166157463	100	-	.	ID=FBgn0052635.1.mrna1.exon1;Name=FBgn0052635.1;Parent=FBgn0052635.1.mrna1;Target=FBgn0052635.1 1 121 +
Chr1	stalkie_big_nohaplotig	exon	166147867	166148709	98	-	.	ID=FBgn0052635.1.mrna1.exon2;Name=FBgn0052635.1;Parent=FBgn0052635.1.mrna1;Target=FBgn0052635.1 122 949 +
Chr1	stalkie_big_nohaplotig	exon	166143473	166143558	100	-	.	ID=FBgn0052635.1.mrna1.exon3;Name=FBgn0052635.1;Parent=FBgn0052635.1.mrna1;Target=FBgn0052635.1 950 1035 +
Chr1	stalkie_big_nohaplotig	exon	166142153	166142327	100	-	.	ID=FBgn0052635.1.mrna1.exon4;Name=FBgn0052635.1;Parent=FBgn0052635.1.mrna1;Target=FBgn0052635.1 1036 1210 +
Chr1	stalkie_big_nohaplotig	exon	166141834	166141988	100	-	.	ID=FBgn0052635.1.mrna1.exon5;Name=FBgn0052635.1;Parent=FBgn0052635.1.mrna1;Target=FBgn0052635.1 1211 1365 +
Chr1	stalkie_big_nohaplotig	exon	166141587	166141684	100	-	.	ID=FBgn0052635.1.mrna1.exon6;Name=FBgn0052635.1;Parent=FBgn0052635.1.mrna1;Target=FBgn0052635.1 1366 1463 +
Chr1	stalkie_big_nohaplotig	exon	166139540	166139679	100	-	.	ID=FBgn0052635.1.mrna1.exon7;Name=FBgn0052635.1;Parent=FBgn0052635.1.mrna1;Target=FBgn0052635.1 1464 1603 +
Chr1	stalkie_big_nohaplotig	exon	166139137	166139246	100	-	.	ID=FBgn0052635.1.mrna1.exon8;Name=FBgn0052635.1;Parent=FBgn0052635.1.mrna1;Target=FBgn0052635.1 1604 1713 +
Chr1	stalkie_big_nohaplotig	exon	166138881	166139012	100	-	.	ID=FBgn0052635.1.mrna1.exon9;Name=FBgn0052635.1;Parent=FBgn0052635.1.mrna1;Target=FBgn0052635.1 1714 1845 +
Chr1	stalkie_big_nohaplotig	exon	166131802	166132395	99	-	.	ID=FBgn0052635.1.mrna1.exon10;Name=FBgn0052635.1;Parent=FBgn0052635.1.mrna1;Target=FBgn0052635.1 1846 2439 +
Chr1	stalkie_big_nohaplotig	CDS	166157343	166157463	100	-	0	ID=FBgn0052635.1.mrna1.cds1;Name=FBgn0052635.1;Parent=FBgn0052635.1.mrna1;Target=FBgn0052635.1 1 121 +
Chr1	stalkie_big_nohaplotig	CDS	166147867	166148709	98	-	1	ID=FBgn0052635.1.mrna1.cds2;Name=FBgn0052635.1;Parent=FBgn0052635.1.mrna1;Target=FBgn0052635.1 122 949 +
Chr1	stalkie_big_nohaplotig	CDS	166143473	166143558	100	-	1	ID=FBgn0052635.1.mrna1.cds3;Name=FBgn0052635.1;Parent=FBgn0052635.1.mrna1;Target=FBgn0052635.1 950 1035 +
Chr1	stalkie_big_nohaplotig	CDS	166142153	166142327	100	-	0	ID=FBgn0052635.1.mrna1.cds4;Name=FBgn0052635.1;Parent=FBgn0052635.1.mrna1;Target=FBgn0052635.1 1036 1210 +
Chr1	stalkie_big_nohaplotig	CDS	166141834	166141988	100	-	1	ID=FBgn0052635.1.mrna1.cds5;Name=FBgn0052635.1;Parent=FBgn0052635.1.mrna1;Target=FBgn0052635.1 1211 1365 +
Chr1	stalkie_big_nohaplotig	CDS	166141587	166141684	100	-	0	ID=FBgn0052635.1.mrna1.cds6;Name=FBgn0052635.1;Parent=FBgn0052635.1.mrna1;Target=FBgn0052635.1 1366 1463 +
Chr1	stalkie_big_nohaplotig	CDS	166139540	166139679	100	-	2	ID=FBgn0052635.1.mrna1.cds7;Name=FBgn0052635.1;Parent=FBgn0052635.1.mrna1;Target=FBgn0052635.1 1464 1603 +
Chr1	stalkie_big_nohaplotig	CDS	166139137	166139246	100	-	1	ID=FBgn0052635.1.mrna1.cds8;Name=FBgn0052635.1;Parent=FBgn0052635.1.mrna1;Target=FBgn0052635.1 1604 1713 +
Chr1	stalkie_big_nohaplotig	CDS	166138881	166139012	100	-	0	ID=FBgn0052635.1.mrna1.cds9;Name=FBgn0052635.1;Parent=FBgn0052635.1.mrna1;Target=FBgn0052635.1 1714 1845 +
Chr1	stalkie_big_nohaplotig	CDS	166131802	166132395	99	-	0	ID=FBgn0052635.1.mrna1.cds10;Name=FBgn0052635.1;Parent=FBgn0052635.1.mrna1;Target=FBgn0052635.1 1846 2439 +
Chr1	stalkie_big_nohaplotig	mRNA	66141391	66149152	.	+	.	ID=FBgn0000625.1.mrna1;Name=FBgn0000625.1;Parent=FBgn0000625.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1237;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	66141391	66141604	100	+	.	ID=FBgn0000625.1.mrna1.exon1;Name=FBgn0000625.1;Parent=FBgn0000625.1.mrna1;Target=FBgn0000625.1 1 214 +
Chr1	stalkie_big_nohaplotig	exon	66147454	66147594	100	+	.	ID=FBgn0000625.1.mrna1.exon2;Name=FBgn0000625.1;Parent=FBgn0000625.1.mrna1;Target=FBgn0000625.1 215 355 +
Chr1	stalkie_big_nohaplotig	exon	66148098	66148600	100	+	.	ID=FBgn0000625.1.mrna1.exon3;Name=FBgn0000625.1;Parent=FBgn0000625.1.mrna1;Target=FBgn0000625.1 356 858 +
Chr1	stalkie_big_nohaplotig	exon	66148772	66149152	99	+	.	ID=FBgn0000625.1.mrna1.exon4;Name=FBgn0000625.1;Parent=FBgn0000625.1.mrna1;Target=FBgn0000625.1 859 1239 +
Chr1	stalkie_big_nohaplotig	CDS	66141391	66141604	100	+	0	ID=FBgn0000625.1.mrna1.cds1;Name=FBgn0000625.1;Parent=FBgn0000625.1.mrna1;Target=FBgn0000625.1 1 214 +
Chr1	stalkie_big_nohaplotig	CDS	66147454	66147594	100	+	1	ID=FBgn0000625.1.mrna1.cds2;Name=FBgn0000625.1;Parent=FBgn0000625.1.mrna1;Target=FBgn0000625.1 215 355 +
Chr1	stalkie_big_nohaplotig	CDS	66148098	66148600	100	+	1	ID=FBgn0000625.1.mrna1.cds3;Name=FBgn0000625.1;Parent=FBgn0000625.1.mrna1;Target=FBgn0000625.1 356 858 +
Chr1	stalkie_big_nohaplotig	CDS	66148772	66149152	99	+	0	ID=FBgn0000625.1.mrna1.cds4;Name=FBgn0000625.1;Parent=FBgn0000625.1.mrna1;Target=FBgn0000625.1 859 1239 +
Chr2	stalkie_big_nohaplotig	mRNA	63534381	63537746	.	-	.	ID=ORF330.mrna1;Name=ORF330;Parent=ORF330.path1;Dir=sensecoverage=94.1;identity=99.1;matches=1877;mismatches=17;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	63537440	63537746	99	-	.	ID=ORF330.mrna1.exon1;Name=ORF330;Parent=ORF330.mrna1;Target=ORF330 108 414 +
Chr2	stalkie_big_nohaplotig	exon	63536145	63536378	100	-	.	ID=ORF330.mrna1.exon2;Name=ORF330;Parent=ORF330.mrna1;Target=ORF330 415 648 +
Chr2	stalkie_big_nohaplotig	exon	63534381	63535733	98	-	.	ID=ORF330.mrna1.exon3;Name=ORF330;Parent=ORF330.mrna1;Target=ORF330 649 2001 +
Chr2	stalkie_big_nohaplotig	CDS	63537440	63537745	99	-	0	ID=ORF330.mrna1.cds1;Name=ORF330;Parent=ORF330.mrna1;Target=ORF330 109 414 +
Chr2	stalkie_big_nohaplotig	CDS	63536145	63536378	100	-	0	ID=ORF330.mrna1.cds2;Name=ORF330;Parent=ORF330.mrna1;Target=ORF330 415 648 +
Chr2	stalkie_big_nohaplotig	CDS	63534381	63535733	98	-	0	ID=ORF330.mrna1.cds3;Name=ORF330;Parent=ORF330.mrna1;Target=ORF330 649 2001 +
Chr1	stalkie_big_nohaplotig	mRNA	157546277	157555084	.	-	.	ID=FBgn0001189.1.mrna1;Name=FBgn0001189.1;Parent=FBgn0001189.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1593;mismatches=3;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	157555022	157555084	100	-	.	ID=FBgn0001189.1.mrna1.exon1;Name=FBgn0001189.1;Parent=FBgn0001189.1.mrna1;Target=FBgn0001189.1 1 63 +
Chr1	stalkie_big_nohaplotig	exon	157550196	157550821	99	-	.	ID=FBgn0001189.1.mrna1.exon2;Name=FBgn0001189.1;Parent=FBgn0001189.1.mrna1;Target=FBgn0001189.1 64 689 +
Chr1	stalkie_big_nohaplotig	exon	157549891	157550125	100	-	.	ID=FBgn0001189.1.mrna1.exon3;Name=FBgn0001189.1;Parent=FBgn0001189.1.mrna1;Target=FBgn0001189.1 690 924 +
Chr1	stalkie_big_nohaplotig	exon	157548802	157548924	100	-	.	ID=FBgn0001189.1.mrna1.exon4;Name=FBgn0001189.1;Parent=FBgn0001189.1.mrna1;Target=FBgn0001189.1 925 1047 +
Chr1	stalkie_big_nohaplotig	exon	157548582	157548740	100	-	.	ID=FBgn0001189.1.mrna1.exon5;Name=FBgn0001189.1;Parent=FBgn0001189.1.mrna1;Target=FBgn0001189.1 1048 1206 +
Chr1	stalkie_big_nohaplotig	exon	157548414	157548524	100	-	.	ID=FBgn0001189.1.mrna1.exon6;Name=FBgn0001189.1;Parent=FBgn0001189.1.mrna1;Target=FBgn0001189.1 1207 1317 +
Chr1	stalkie_big_nohaplotig	exon	157546277	157546555	100	-	.	ID=FBgn0001189.1.mrna1.exon7;Name=FBgn0001189.1;Parent=FBgn0001189.1.mrna1;Target=FBgn0001189.1 1318 1596 +
Chr1	stalkie_big_nohaplotig	CDS	157555022	157555084	100	-	0	ID=FBgn0001189.1.mrna1.cds1;Name=FBgn0001189.1;Parent=FBgn0001189.1.mrna1;Target=FBgn0001189.1 1 63 +
Chr1	stalkie_big_nohaplotig	CDS	157550196	157550821	99	-	0	ID=FBgn0001189.1.mrna1.cds2;Name=FBgn0001189.1;Parent=FBgn0001189.1.mrna1;Target=FBgn0001189.1 64 689 +
Chr1	stalkie_big_nohaplotig	CDS	157549891	157550125	100	-	2	ID=FBgn0001189.1.mrna1.cds3;Name=FBgn0001189.1;Parent=FBgn0001189.1.mrna1;Target=FBgn0001189.1 690 924 +
Chr1	stalkie_big_nohaplotig	CDS	157548802	157548924	100	-	0	ID=FBgn0001189.1.mrna1.cds4;Name=FBgn0001189.1;Parent=FBgn0001189.1.mrna1;Target=FBgn0001189.1 925 1047 +
Chr1	stalkie_big_nohaplotig	CDS	157548582	157548740	100	-	0	ID=FBgn0001189.1.mrna1.cds5;Name=FBgn0001189.1;Parent=FBgn0001189.1.mrna1;Target=FBgn0001189.1 1048 1206 +
Chr1	stalkie_big_nohaplotig	CDS	157548414	157548524	100	-	0	ID=FBgn0001189.1.mrna1.cds6;Name=FBgn0001189.1;Parent=FBgn0001189.1.mrna1;Target=FBgn0001189.1 1207 1317 +
Chr1	stalkie_big_nohaplotig	CDS	157546277	157546555	100	-	0	ID=FBgn0001189.1.mrna1.cds7;Name=FBgn0001189.1;Parent=FBgn0001189.1.mrna1;Target=FBgn0001189.1 1318 1596 +
Chr1	stalkie_big_nohaplotig	mRNA	157534299	157536038	.	-	.	ID=FBgn0034270.1.mrna1;Name=FBgn0034270.1;Parent=FBgn0034270.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1455;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	157536013	157536038	100	-	.	ID=FBgn0034270.1.mrna1.exon1;Name=FBgn0034270.1;Parent=FBgn0034270.1.mrna1;Target=FBgn0034270.1 1 26 +
Chr1	stalkie_big_nohaplotig	exon	157535866	157535956	100	-	.	ID=FBgn0034270.1.mrna1.exon2;Name=FBgn0034270.1;Parent=FBgn0034270.1.mrna1;Target=FBgn0034270.1 27 117 +
Chr1	stalkie_big_nohaplotig	exon	157535562	157535807	100	-	.	ID=FBgn0034270.1.mrna1.exon3;Name=FBgn0034270.1;Parent=FBgn0034270.1.mrna1;Target=FBgn0034270.1 118 363 +
Chr1	stalkie_big_nohaplotig	exon	157535392	157535509	100	-	.	ID=FBgn0034270.1.mrna1.exon4;Name=FBgn0034270.1;Parent=FBgn0034270.1.mrna1;Target=FBgn0034270.1 364 481 +
Chr1	stalkie_big_nohaplotig	exon	157535210	157535329	100	-	.	ID=FBgn0034270.1.mrna1.exon5;Name=FBgn0034270.1;Parent=FBgn0034270.1.mrna1;Target=FBgn0034270.1 482 601 +
Chr1	stalkie_big_nohaplotig	exon	157534299	157535152	100	-	.	ID=FBgn0034270.1.mrna1.exon6;Name=FBgn0034270.1;Parent=FBgn0034270.1.mrna1;Target=FBgn0034270.1 602 1455 +
Chr1	stalkie_big_nohaplotig	CDS	157536013	157536038	100	-	0	ID=FBgn0034270.1.mrna1.cds1;Name=FBgn0034270.1;Parent=FBgn0034270.1.mrna1;Target=FBgn0034270.1 1 26 +
Chr1	stalkie_big_nohaplotig	CDS	157535866	157535956	100	-	2	ID=FBgn0034270.1.mrna1.cds2;Name=FBgn0034270.1;Parent=FBgn0034270.1.mrna1;Target=FBgn0034270.1 27 117 +
Chr1	stalkie_big_nohaplotig	CDS	157535562	157535807	100	-	0	ID=FBgn0034270.1.mrna1.cds3;Name=FBgn0034270.1;Parent=FBgn0034270.1.mrna1;Target=FBgn0034270.1 118 363 +
Chr1	stalkie_big_nohaplotig	CDS	157535392	157535509	100	-	0	ID=FBgn0034270.1.mrna1.cds4;Name=FBgn0034270.1;Parent=FBgn0034270.1.mrna1;Target=FBgn0034270.1 364 481 +
Chr1	stalkie_big_nohaplotig	CDS	157535210	157535329	100	-	1	ID=FBgn0034270.1.mrna1.cds5;Name=FBgn0034270.1;Parent=FBgn0034270.1.mrna1;Target=FBgn0034270.1 482 601 +
Chr1	stalkie_big_nohaplotig	CDS	157534299	157535152	100	-	1	ID=FBgn0034270.1.mrna1.cds6;Name=FBgn0034270.1;Parent=FBgn0034270.1.mrna1;Target=FBgn0034270.1 602 1455 +
Chr2	stalkie_big_nohaplotig	mRNA	89010080	89013972	.	+	.	ID=FBgn0028647.1.mrna1;Name=FBgn0028647.1;Parent=FBgn0028647.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3567;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	89010080	89010238	100	+	.	ID=FBgn0028647.1.mrna1.exon1;Name=FBgn0028647.1;Parent=FBgn0028647.1.mrna1;Target=FBgn0028647.1 1 159 +
Chr2	stalkie_big_nohaplotig	exon	89010295	89010697	100	+	.	ID=FBgn0028647.1.mrna1.exon2;Name=FBgn0028647.1;Parent=FBgn0028647.1.mrna1;Target=FBgn0028647.1 160 562 +
Chr2	stalkie_big_nohaplotig	exon	89010752	89010857	100	+	.	ID=FBgn0028647.1.mrna1.exon3;Name=FBgn0028647.1;Parent=FBgn0028647.1.mrna1;Target=FBgn0028647.1 563 668 +
Chr2	stalkie_big_nohaplotig	exon	89010914	89012652	100	+	.	ID=FBgn0028647.1.mrna1.exon4;Name=FBgn0028647.1;Parent=FBgn0028647.1.mrna1;Target=FBgn0028647.1 669 2407 +
Chr2	stalkie_big_nohaplotig	exon	89012714	89013342	100	+	.	ID=FBgn0028647.1.mrna1.exon5;Name=FBgn0028647.1;Parent=FBgn0028647.1.mrna1;Target=FBgn0028647.1 2408 3036 +
Chr2	stalkie_big_nohaplotig	exon	89013442	89013972	100	+	.	ID=FBgn0028647.1.mrna1.exon6;Name=FBgn0028647.1;Parent=FBgn0028647.1.mrna1;Target=FBgn0028647.1 3037 3567 +
Chr2	stalkie_big_nohaplotig	CDS	89010080	89010238	100	+	0	ID=FBgn0028647.1.mrna1.cds1;Name=FBgn0028647.1;Parent=FBgn0028647.1.mrna1;Target=FBgn0028647.1 1 159 +
Chr2	stalkie_big_nohaplotig	CDS	89010295	89010697	100	+	0	ID=FBgn0028647.1.mrna1.cds2;Name=FBgn0028647.1;Parent=FBgn0028647.1.mrna1;Target=FBgn0028647.1 160 562 +
Chr2	stalkie_big_nohaplotig	CDS	89010752	89010857	100	+	1	ID=FBgn0028647.1.mrna1.cds3;Name=FBgn0028647.1;Parent=FBgn0028647.1.mrna1;Target=FBgn0028647.1 563 668 +
Chr2	stalkie_big_nohaplotig	CDS	89010914	89012652	100	+	2	ID=FBgn0028647.1.mrna1.cds4;Name=FBgn0028647.1;Parent=FBgn0028647.1.mrna1;Target=FBgn0028647.1 669 2407 +
Chr2	stalkie_big_nohaplotig	CDS	89012714	89013342	100	+	1	ID=FBgn0028647.1.mrna1.cds5;Name=FBgn0028647.1;Parent=FBgn0028647.1.mrna1;Target=FBgn0028647.1 2408 3036 +
Chr2	stalkie_big_nohaplotig	CDS	89013442	89013972	100	+	0	ID=FBgn0028647.1.mrna1.cds6;Name=FBgn0028647.1;Parent=FBgn0028647.1.mrna1;Target=FBgn0028647.1 3037 3567 +
Chr2	stalkie_big_nohaplotig	mRNA	88994882	89000203	.	+	.	ID=FBgn0028647.3.mrna1;Name=FBgn0028647.3;Parent=FBgn0028647.3.path1;Dir=sensecoverage=100.0;identity=100.0;matches=4719;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	88994882	88995049	100	+	.	ID=FBgn0028647.3.mrna1.exon1;Name=FBgn0028647.3;Parent=FBgn0028647.3.mrna1;Target=FBgn0028647.3 1 168 +
Chr2	stalkie_big_nohaplotig	exon	88995125	88995560	100	+	.	ID=FBgn0028647.3.mrna1.exon2;Name=FBgn0028647.3;Parent=FBgn0028647.3.mrna1;Target=FBgn0028647.3 169 604 +
Chr2	stalkie_big_nohaplotig	exon	88995624	88995726	100	+	.	ID=FBgn0028647.3.mrna1.exon3;Name=FBgn0028647.3;Parent=FBgn0028647.3.mrna1;Target=FBgn0028647.3 605 707 +
Chr2	stalkie_big_nohaplotig	exon	88995789	88997704	100	+	.	ID=FBgn0028647.3.mrna1.exon4;Name=FBgn0028647.3;Parent=FBgn0028647.3.mrna1;Target=FBgn0028647.3 708 2623 +
Chr2	stalkie_big_nohaplotig	exon	88997769	88998424	100	+	.	ID=FBgn0028647.3.mrna1.exon5;Name=FBgn0028647.3;Parent=FBgn0028647.3.mrna1;Target=FBgn0028647.3 2624 3279 +
Chr2	stalkie_big_nohaplotig	exon	88998694	88999311	100	+	.	ID=FBgn0028647.3.mrna1.exon6;Name=FBgn0028647.3;Parent=FBgn0028647.3.mrna1;Target=FBgn0028647.3 3280 3897 +
Chr2	stalkie_big_nohaplotig	exon	88999382	89000203	100	+	.	ID=FBgn0028647.3.mrna1.exon7;Name=FBgn0028647.3;Parent=FBgn0028647.3.mrna1;Target=FBgn0028647.3 3898 4719 +
Chr2	stalkie_big_nohaplotig	CDS	88994882	88995049	100	+	0	ID=FBgn0028647.3.mrna1.cds1;Name=FBgn0028647.3;Parent=FBgn0028647.3.mrna1;Target=FBgn0028647.3 1 168 +
Chr2	stalkie_big_nohaplotig	CDS	88995125	88995560	100	+	0	ID=FBgn0028647.3.mrna1.cds2;Name=FBgn0028647.3;Parent=FBgn0028647.3.mrna1;Target=FBgn0028647.3 169 604 +
Chr2	stalkie_big_nohaplotig	CDS	88995624	88995726	100	+	1	ID=FBgn0028647.3.mrna1.cds3;Name=FBgn0028647.3;Parent=FBgn0028647.3.mrna1;Target=FBgn0028647.3 605 707 +
Chr2	stalkie_big_nohaplotig	CDS	88995789	88997704	100	+	2	ID=FBgn0028647.3.mrna1.cds4;Name=FBgn0028647.3;Parent=FBgn0028647.3.mrna1;Target=FBgn0028647.3 708 2623 +
Chr2	stalkie_big_nohaplotig	CDS	88997769	88998424	100	+	1	ID=FBgn0028647.3.mrna1.cds5;Name=FBgn0028647.3;Parent=FBgn0028647.3.mrna1;Target=FBgn0028647.3 2624 3279 +
Chr2	stalkie_big_nohaplotig	CDS	88998694	88999311	100	+	0	ID=FBgn0028647.3.mrna1.cds6;Name=FBgn0028647.3;Parent=FBgn0028647.3.mrna1;Target=FBgn0028647.3 3280 3897 +
Chr2	stalkie_big_nohaplotig	CDS	88999382	89000203	100	+	0	ID=FBgn0028647.3.mrna1.cds7;Name=FBgn0028647.3;Parent=FBgn0028647.3.mrna1;Target=FBgn0028647.3 3898 4719 +
Chr2	stalkie_big_nohaplotig	mRNA	89081790	89083410	.	+	.	ID=FBgn0039331.1.mrna1;Name=FBgn0039331.1;Parent=FBgn0039331.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1566;mismatches=3;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	89081790	89081973	100	+	.	ID=FBgn0039331.1.mrna1.exon1;Name=FBgn0039331.1;Parent=FBgn0039331.1.mrna1;Target=FBgn0039331.1 1 184 +
Chr2	stalkie_big_nohaplotig	exon	89082026	89083410	99	+	.	ID=FBgn0039331.1.mrna1.exon2;Name=FBgn0039331.1;Parent=FBgn0039331.1.mrna1;Target=FBgn0039331.1 185 1569 +
Chr2	stalkie_big_nohaplotig	CDS	89081790	89081973	100	+	0	ID=FBgn0039331.1.mrna1.cds1;Name=FBgn0039331.1;Parent=FBgn0039331.1.mrna1;Target=FBgn0039331.1 1 184 +
Chr2	stalkie_big_nohaplotig	CDS	89082026	89083410	99	+	1	ID=FBgn0039331.1.mrna1.cds2;Name=FBgn0039331.1;Parent=FBgn0039331.1.mrna1;Target=FBgn0039331.1 185 1569 +
ChrX	stalkie_big_nohaplotig	mRNA	67923799	67947934	.	-	.	ID=FBgn0031473.1.mrna1;Name=FBgn0031473.1;Parent=FBgn0031473.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=983;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	67947863	67947934	100	-	.	ID=FBgn0031473.1.mrna1.exon1;Name=FBgn0031473.1;Parent=FBgn0031473.1.mrna1;Target=FBgn0031473.1 1 72 +
ChrX	stalkie_big_nohaplotig	exon	67929659	67929769	100	-	.	ID=FBgn0031473.1.mrna1.exon2;Name=FBgn0031473.1;Parent=FBgn0031473.1.mrna1;Target=FBgn0031473.1 73 183 +
ChrX	stalkie_big_nohaplotig	exon	67924602	67924799	100	-	.	ID=FBgn0031473.1.mrna1.exon3;Name=FBgn0031473.1;Parent=FBgn0031473.1.mrna1;Target=FBgn0031473.1 184 381 +
ChrX	stalkie_big_nohaplotig	exon	67924433	67924531	98	-	.	ID=FBgn0031473.1.mrna1.exon4;Name=FBgn0031473.1;Parent=FBgn0031473.1.mrna1;Target=FBgn0031473.1 382 480 +
ChrX	stalkie_big_nohaplotig	exon	67924070	67924363	100	-	.	ID=FBgn0031473.1.mrna1.exon5;Name=FBgn0031473.1;Parent=FBgn0031473.1.mrna1;Target=FBgn0031473.1 481 774 +
ChrX	stalkie_big_nohaplotig	exon	67923799	67924008	100	-	.	ID=FBgn0031473.1.mrna1.exon6;Name=FBgn0031473.1;Parent=FBgn0031473.1.mrna1;Target=FBgn0031473.1 775 984 +
ChrX	stalkie_big_nohaplotig	CDS	67947863	67947934	100	-	0	ID=FBgn0031473.1.mrna1.cds1;Name=FBgn0031473.1;Parent=FBgn0031473.1.mrna1;Target=FBgn0031473.1 1 72 +
ChrX	stalkie_big_nohaplotig	CDS	67929659	67929769	100	-	0	ID=FBgn0031473.1.mrna1.cds2;Name=FBgn0031473.1;Parent=FBgn0031473.1.mrna1;Target=FBgn0031473.1 73 183 +
ChrX	stalkie_big_nohaplotig	CDS	67924602	67924799	100	-	0	ID=FBgn0031473.1.mrna1.cds3;Name=FBgn0031473.1;Parent=FBgn0031473.1.mrna1;Target=FBgn0031473.1 184 381 +
ChrX	stalkie_big_nohaplotig	CDS	67924433	67924531	98	-	0	ID=FBgn0031473.1.mrna1.cds4;Name=FBgn0031473.1;Parent=FBgn0031473.1.mrna1;Target=FBgn0031473.1 382 480 +
ChrX	stalkie_big_nohaplotig	CDS	67924070	67924363	100	-	0	ID=FBgn0031473.1.mrna1.cds5;Name=FBgn0031473.1;Parent=FBgn0031473.1.mrna1;Target=FBgn0031473.1 481 774 +
ChrX	stalkie_big_nohaplotig	CDS	67923799	67924008	100	-	0	ID=FBgn0031473.1.mrna1.cds6;Name=FBgn0031473.1;Parent=FBgn0031473.1.mrna1;Target=FBgn0031473.1 775 984 +
ChrX	stalkie_big_nohaplotig	mRNA	67934000	67934952	.	+	.	ID=ORF1826.mrna1;Name=ORF1826;Parent=ORF1826.path1;Dir=indeterminatecoverage=96.6;identity=100.0;matches=953;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	67934000	67934952	100	+	.	ID=ORF1826.mrna1.exon1;Name=ORF1826;Parent=ORF1826.mrna1;Target=ORF1826 987 35 .
ChrX	stalkie_big_nohaplotig	CDS	67934002	67934952	100	+	0	ID=ORF1826.mrna1.cds1;Name=ORF1826;Parent=ORF1826.mrna1;Target=ORF1826 987 37 .
Chr2	stalkie_big_nohaplotig	mRNA	48035111	48035692	.	-	.	ID=FBgn0035149.1.mrna1;Name=FBgn0035149.1;Parent=FBgn0035149.1.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=582;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	48035111	48035692	100	-	.	ID=FBgn0035149.1.mrna1.exon1;Name=FBgn0035149.1;Parent=FBgn0035149.1.mrna1;Target=FBgn0035149.1 582 1 .
Chr2	stalkie_big_nohaplotig	CDS	48035111	48035692	100	-	0	ID=FBgn0035149.1.mrna1.cds1;Name=FBgn0035149.1;Parent=FBgn0035149.1.mrna1;Target=FBgn0035149.1 582 1 .
Chr1	stalkie_big_nohaplotig	mRNA	104473604	104474656	.	-	.	ID=ORF1591.mrna1;Name=ORF1591;Parent=ORF1591.path1;Dir=indeterminatecoverage=100.0;identity=99.3;matches=1046;mismatches=7;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	104473604	104474656	99	-	.	ID=ORF1591.mrna1.exon1;Name=ORF1591;Parent=ORF1591.mrna1;Target=ORF1591 1053 1 .
Chr1	stalkie_big_nohaplotig	CDS	104473604	104474656	99	-	0	ID=ORF1591.mrna1.cds1;Name=ORF1591;Parent=ORF1591.mrna1;Target=ORF1591 1053 1 .
ChrX	stalkie_big_nohaplotig	mRNA	44810369	44811259	.	-	.	ID=ORF2248.mrna1;Name=ORF2248;Parent=ORF2248.path1;Dir=indeterminatecoverage=100.0;identity=99.7;matches=888;mismatches=3;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	44810369	44811259	99	-	.	ID=ORF2248.mrna1.exon1;Name=ORF2248;Parent=ORF2248.mrna1;Target=ORF2248 891 1 .
ChrX	stalkie_big_nohaplotig	CDS	44810369	44811259	99	-	0	ID=ORF2248.mrna1.cds1;Name=ORF2248;Parent=ORF2248.mrna1;Target=ORF2248 891 1 .
Chr2	stalkie_big_nohaplotig	mRNA	152248762	152270868	.	+	.	ID=FBgn0038881.1.mrna1;Name=FBgn0038881.1;Parent=FBgn0038881.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2810;mismatches=7;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	152248762	152249452	100	+	.	ID=FBgn0038881.1.mrna1.exon1;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 1 691 +
Chr2	stalkie_big_nohaplotig	exon	152251073	152251220	99	+	.	ID=FBgn0038881.1.mrna1.exon2;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 692 839 +
Chr2	stalkie_big_nohaplotig	exon	152256344	152256585	100	+	.	ID=FBgn0038881.1.mrna1.exon3;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 840 1081 +
Chr2	stalkie_big_nohaplotig	exon	152266485	152266607	100	+	.	ID=FBgn0038881.1.mrna1.exon4;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 1082 1204 +
Chr2	stalkie_big_nohaplotig	exon	152266759	152266896	99	+	.	ID=FBgn0038881.1.mrna1.exon5;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 1205 1342 +
Chr2	stalkie_big_nohaplotig	exon	152267114	152267251	99	+	.	ID=FBgn0038881.1.mrna1.exon6;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 1343 1480 +
Chr2	stalkie_big_nohaplotig	exon	152267369	152267457	100	+	.	ID=FBgn0038881.1.mrna1.exon7;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 1481 1569 +
Chr2	stalkie_big_nohaplotig	exon	152267903	152268030	100	+	.	ID=FBgn0038881.1.mrna1.exon8;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 1570 1697 +
Chr2	stalkie_big_nohaplotig	exon	152268267	152268386	100	+	.	ID=FBgn0038881.1.mrna1.exon9;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 1698 1817 +
Chr2	stalkie_big_nohaplotig	exon	152269545	152269690	100	+	.	ID=FBgn0038881.1.mrna1.exon10;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 1818 1963 +
Chr2	stalkie_big_nohaplotig	exon	152269758	152269929	98	+	.	ID=FBgn0038881.1.mrna1.exon11;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 1964 2135 +
Chr2	stalkie_big_nohaplotig	exon	152270003	152270361	99	+	.	ID=FBgn0038881.1.mrna1.exon12;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 2136 2494 +
Chr2	stalkie_big_nohaplotig	exon	152270437	152270634	99	+	.	ID=FBgn0038881.1.mrna1.exon13;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 2495 2692 +
Chr2	stalkie_big_nohaplotig	exon	152270744	152270868	100	+	.	ID=FBgn0038881.1.mrna1.exon14;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 2693 2817 +
Chr2	stalkie_big_nohaplotig	CDS	152248762	152249452	100	+	0	ID=FBgn0038881.1.mrna1.cds1;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 1 691 +
Chr2	stalkie_big_nohaplotig	CDS	152251073	152251220	99	+	1	ID=FBgn0038881.1.mrna1.cds2;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 692 839 +
Chr2	stalkie_big_nohaplotig	CDS	152256344	152256585	100	+	2	ID=FBgn0038881.1.mrna1.cds3;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 840 1081 +
Chr2	stalkie_big_nohaplotig	CDS	152266485	152266607	100	+	1	ID=FBgn0038881.1.mrna1.cds4;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 1082 1204 +
Chr2	stalkie_big_nohaplotig	CDS	152266759	152266896	99	+	1	ID=FBgn0038881.1.mrna1.cds5;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 1205 1342 +
Chr2	stalkie_big_nohaplotig	CDS	152267114	152267251	99	+	1	ID=FBgn0038881.1.mrna1.cds6;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 1343 1480 +
Chr2	stalkie_big_nohaplotig	CDS	152267369	152267457	100	+	1	ID=FBgn0038881.1.mrna1.cds7;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 1481 1569 +
Chr2	stalkie_big_nohaplotig	CDS	152267903	152268030	100	+	0	ID=FBgn0038881.1.mrna1.cds8;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 1570 1697 +
Chr2	stalkie_big_nohaplotig	CDS	152268267	152268386	100	+	2	ID=FBgn0038881.1.mrna1.cds9;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 1698 1817 +
Chr2	stalkie_big_nohaplotig	CDS	152269545	152269690	100	+	2	ID=FBgn0038881.1.mrna1.cds10;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 1818 1963 +
Chr2	stalkie_big_nohaplotig	CDS	152269758	152269929	98	+	1	ID=FBgn0038881.1.mrna1.cds11;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 1964 2135 +
Chr2	stalkie_big_nohaplotig	CDS	152270003	152270361	99	+	2	ID=FBgn0038881.1.mrna1.cds12;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 2136 2494 +
Chr2	stalkie_big_nohaplotig	CDS	152270437	152270634	99	+	1	ID=FBgn0038881.1.mrna1.cds13;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 2495 2692 +
Chr2	stalkie_big_nohaplotig	CDS	152270744	152270868	100	+	1	ID=FBgn0038881.1.mrna1.cds14;Name=FBgn0038881.1;Parent=FBgn0038881.1.mrna1;Target=FBgn0038881.1 2693 2817 +
Chr1	stalkie_big_nohaplotig	mRNA	147593982	147600701	.	-	.	ID=FBgn0031069.1.mrna1;Name=FBgn0031069.1;Parent=FBgn0031069.1.path1;Dir=sensecoverage=94.1;identity=99.0;matches=1843;mismatches=18;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	147600589	147600701	100	-	.	ID=FBgn0031069.1.mrna1.exon1;Name=FBgn0031069.1;Parent=FBgn0031069.1.mrna1;Target=FBgn0031069.1 117 229 +
Chr1	stalkie_big_nohaplotig	exon	147596865	147597055	100	-	.	ID=FBgn0031069.1.mrna1.exon2;Name=FBgn0031069.1;Parent=FBgn0031069.1.mrna1;Target=FBgn0031069.1 230 420 +
Chr1	stalkie_big_nohaplotig	exon	147596700	147596797	98	-	.	ID=FBgn0031069.1.mrna1.exon3;Name=FBgn0031069.1;Parent=FBgn0031069.1.mrna1;Target=FBgn0031069.1 421 518 +
Chr1	stalkie_big_nohaplotig	exon	147596450	147596630	99	-	.	ID=FBgn0031069.1.mrna1.exon4;Name=FBgn0031069.1;Parent=FBgn0031069.1.mrna1;Target=FBgn0031069.1 519 699 +
Chr1	stalkie_big_nohaplotig	exon	147596107	147596389	99	-	.	ID=FBgn0031069.1.mrna1.exon5;Name=FBgn0031069.1;Parent=FBgn0031069.1.mrna1;Target=FBgn0031069.1 700 982 +
Chr1	stalkie_big_nohaplotig	exon	147595941	147596038	98	-	.	ID=FBgn0031069.1.mrna1.exon6;Name=FBgn0031069.1;Parent=FBgn0031069.1.mrna1;Target=FBgn0031069.1 983 1080 +
Chr1	stalkie_big_nohaplotig	exon	147595790	147595880	100	-	.	ID=FBgn0031069.1.mrna1.exon7;Name=FBgn0031069.1;Parent=FBgn0031069.1.mrna1;Target=FBgn0031069.1 1081 1171 +
Chr1	stalkie_big_nohaplotig	exon	147595503	147595722	96	-	.	ID=FBgn0031069.1.mrna1.exon8;Name=FBgn0031069.1;Parent=FBgn0031069.1.mrna1;Target=FBgn0031069.1 1172 1391 +
Chr1	stalkie_big_nohaplotig	exon	147594463	147594637	98	-	.	ID=FBgn0031069.1.mrna1.exon9;Name=FBgn0031069.1;Parent=FBgn0031069.1.mrna1;Target=FBgn0031069.1 1392 1566 +
Chr1	stalkie_big_nohaplotig	exon	147593982	147594392	99	-	.	ID=FBgn0031069.1.mrna1.exon10;Name=FBgn0031069.1;Parent=FBgn0031069.1.mrna1;Target=FBgn0031069.1 1567 1977 +
Chr1	stalkie_big_nohaplotig	CDS	147600589	147600700	100	-	0	ID=FBgn0031069.1.mrna1.cds1;Name=FBgn0031069.1;Parent=FBgn0031069.1.mrna1;Target=FBgn0031069.1 118 229 +
Chr1	stalkie_big_nohaplotig	CDS	147596865	147597055	100	-	1	ID=FBgn0031069.1.mrna1.cds2;Name=FBgn0031069.1;Parent=FBgn0031069.1.mrna1;Target=FBgn0031069.1 230 420 +
Chr1	stalkie_big_nohaplotig	CDS	147596700	147596797	98	-	0	ID=FBgn0031069.1.mrna1.cds3;Name=FBgn0031069.1;Parent=FBgn0031069.1.mrna1;Target=FBgn0031069.1 421 518 +
Chr1	stalkie_big_nohaplotig	CDS	147596450	147596630	99	-	2	ID=FBgn0031069.1.mrna1.cds4;Name=FBgn0031069.1;Parent=FBgn0031069.1.mrna1;Target=FBgn0031069.1 519 699 +
Chr1	stalkie_big_nohaplotig	CDS	147596107	147596389	99	-	0	ID=FBgn0031069.1.mrna1.cds5;Name=FBgn0031069.1;Parent=FBgn0031069.1.mrna1;Target=FBgn0031069.1 700 982 +
Chr1	stalkie_big_nohaplotig	CDS	147595941	147596038	98	-	1	ID=FBgn0031069.1.mrna1.cds6;Name=FBgn0031069.1;Parent=FBgn0031069.1.mrna1;Target=FBgn0031069.1 983 1080 +
Chr1	stalkie_big_nohaplotig	CDS	147595790	147595880	100	-	0	ID=FBgn0031069.1.mrna1.cds7;Name=FBgn0031069.1;Parent=FBgn0031069.1.mrna1;Target=FBgn0031069.1 1081 1171 +
Chr1	stalkie_big_nohaplotig	CDS	147595503	147595722	96	-	1	ID=FBgn0031069.1.mrna1.cds8;Name=FBgn0031069.1;Parent=FBgn0031069.1.mrna1;Target=FBgn0031069.1 1172 1391 +
Chr1	stalkie_big_nohaplotig	CDS	147594463	147594637	98	-	2	ID=FBgn0031069.1.mrna1.cds9;Name=FBgn0031069.1;Parent=FBgn0031069.1.mrna1;Target=FBgn0031069.1 1392 1566 +
Chr1	stalkie_big_nohaplotig	CDS	147593982	147594392	99	-	0	ID=FBgn0031069.1.mrna1.cds10;Name=FBgn0031069.1;Parent=FBgn0031069.1.mrna1;Target=FBgn0031069.1 1567 1977 +
Chr2	stalkie_big_nohaplotig	mRNA	62242435	62243073	.	-	.	ID=FBgn0040010.2.mrna1;Name=FBgn0040010.2;Parent=FBgn0040010.2.path1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=635;mismatches=4;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	62242435	62243073	99	-	.	ID=FBgn0040010.2.mrna1.exon1;Name=FBgn0040010.2;Parent=FBgn0040010.2.mrna1;Target=FBgn0040010.2 639 1 .
Chr2	stalkie_big_nohaplotig	CDS	62242435	62243073	99	-	0	ID=FBgn0040010.2.mrna1.cds1;Name=FBgn0040010.2;Parent=FBgn0040010.2.mrna1;Target=FBgn0040010.2 639 1 .
Chr2	stalkie_big_nohaplotig	mRNA	15282586	15287739	.	-	.	ID=FBgn0050273.2.mrna1;Name=FBgn0050273.2;Parent=FBgn0050273.2.path1;Dir=sensecoverage=100.0;identity=99.3;matches=599;mismatches=4;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	15287379	15287739	99	-	.	ID=FBgn0050273.2.mrna1.exon1;Name=FBgn0050273.2;Parent=FBgn0050273.2.mrna1;Target=FBgn0050273.2 1 361 +
Chr2	stalkie_big_nohaplotig	exon	15285078	15285213	99	-	.	ID=FBgn0050273.2.mrna1.exon2;Name=FBgn0050273.2;Parent=FBgn0050273.2.mrna1;Target=FBgn0050273.2 362 497 +
Chr2	stalkie_big_nohaplotig	exon	15282586	15282691	99	-	.	ID=FBgn0050273.2.mrna1.exon3;Name=FBgn0050273.2;Parent=FBgn0050273.2.mrna1;Target=FBgn0050273.2 498 603 +
Chr2	stalkie_big_nohaplotig	CDS	15287379	15287739	99	-	0	ID=FBgn0050273.2.mrna1.cds1;Name=FBgn0050273.2;Parent=FBgn0050273.2.mrna1;Target=FBgn0050273.2 1 361 +
Chr2	stalkie_big_nohaplotig	CDS	15285078	15285213	99	-	1	ID=FBgn0050273.2.mrna1.cds2;Name=FBgn0050273.2;Parent=FBgn0050273.2.mrna1;Target=FBgn0050273.2 362 497 +
Chr2	stalkie_big_nohaplotig	CDS	15282586	15282691	99	-	2	ID=FBgn0050273.2.mrna1.cds3;Name=FBgn0050273.2;Parent=FBgn0050273.2.mrna1;Target=FBgn0050273.2 498 603 +
Chr2	stalkie_big_nohaplotig	mRNA	15065168	15071659	.	-	.	ID=FBgn0033584.2.mrna1;Name=FBgn0033584.2;Parent=FBgn0033584.2.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1574;mismatches=7;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	15071626	15071659	100	-	.	ID=FBgn0033584.2.mrna1.exon1;Name=FBgn0033584.2;Parent=FBgn0033584.2.mrna1;Target=FBgn0033584.2 1 34 +
Chr2	stalkie_big_nohaplotig	exon	15065168	15066714	99	-	.	ID=FBgn0033584.2.mrna1.exon2;Name=FBgn0033584.2;Parent=FBgn0033584.2.mrna1;Target=FBgn0033584.2 35 1581 +
Chr2	stalkie_big_nohaplotig	CDS	15071626	15071659	100	-	0	ID=FBgn0033584.2.mrna1.cds1;Name=FBgn0033584.2;Parent=FBgn0033584.2.mrna1;Target=FBgn0033584.2 1 34 +
Chr2	stalkie_big_nohaplotig	CDS	15065168	15066714	99	-	1	ID=FBgn0033584.2.mrna1.cds2;Name=FBgn0033584.2;Parent=FBgn0033584.2.mrna1;Target=FBgn0033584.2 35 1581 +
Chr2	stalkie_big_nohaplotig	mRNA	15086601	15099568	.	+	.	ID=FBgn0085436.1.mrna1;Name=FBgn0085436.1;Parent=FBgn0085436.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=7400;mismatches=21;indels=0;unknowns=19
Chr2	stalkie_big_nohaplotig	exon	15086601	15086765	100	+	.	ID=FBgn0085436.1.mrna1.exon1;Name=FBgn0085436.1;Parent=FBgn0085436.1.mrna1;Target=FBgn0085436.1 1 165 +
Chr2	stalkie_big_nohaplotig	exon	15090334	15090534	100	+	.	ID=FBgn0085436.1.mrna1.exon2;Name=FBgn0085436.1;Parent=FBgn0085436.1.mrna1;Target=FBgn0085436.1 166 366 +
Chr2	stalkie_big_nohaplotig	exon	15090602	15091090	99	+	.	ID=FBgn0085436.1.mrna1.exon3;Name=FBgn0085436.1;Parent=FBgn0085436.1.mrna1;Target=FBgn0085436.1 367 855 +
Chr2	stalkie_big_nohaplotig	exon	15091156	15091597	99	+	.	ID=FBgn0085436.1.mrna1.exon4;Name=FBgn0085436.1;Parent=FBgn0085436.1.mrna1;Target=FBgn0085436.1 856 1297 +
Chr2	stalkie_big_nohaplotig	exon	15091671	15092900	99	+	.	ID=FBgn0085436.1.mrna1.exon5;Name=FBgn0085436.1;Parent=FBgn0085436.1.mrna1;Target=FBgn0085436.1 1298 2527 +
Chr2	stalkie_big_nohaplotig	exon	15092957	15093733	99	+	.	ID=FBgn0085436.1.mrna1.exon6;Name=FBgn0085436.1;Parent=FBgn0085436.1.mrna1;Target=FBgn0085436.1 2528 3304 +
Chr2	stalkie_big_nohaplotig	exon	15094681	15096265	99	+	.	ID=FBgn0085436.1.mrna1.exon7;Name=FBgn0085436.1;Parent=FBgn0085436.1.mrna1;Target=FBgn0085436.1 3305 4889 +
Chr2	stalkie_big_nohaplotig	exon	15096333	15097260	99	+	.	ID=FBgn0085436.1.mrna1.exon8;Name=FBgn0085436.1;Parent=FBgn0085436.1.mrna1;Target=FBgn0085436.1 4890 5817 +
Chr2	stalkie_big_nohaplotig	exon	15097470	15098638	100	+	.	ID=FBgn0085436.1.mrna1.exon9;Name=FBgn0085436.1;Parent=FBgn0085436.1.mrna1;Target=FBgn0085436.1 5818 6986 +
Chr2	stalkie_big_nohaplotig	exon	15098754	15099113	100	+	.	ID=FBgn0085436.1.mrna1.exon10;Name=FBgn0085436.1;Parent=FBgn0085436.1.mrna1;Target=FBgn0085436.1 6987 7346 +
Chr2	stalkie_big_nohaplotig	exon	15099475	15099568	100	+	.	ID=FBgn0085436.1.mrna1.exon11;Name=FBgn0085436.1;Parent=FBgn0085436.1.mrna1;Target=FBgn0085436.1 7347 7440 +
Chr2	stalkie_big_nohaplotig	CDS	15086601	15086765	100	+	0	ID=FBgn0085436.1.mrna1.cds1;Name=FBgn0085436.1;Parent=FBgn0085436.1.mrna1;Target=FBgn0085436.1 1 165 +
Chr2	stalkie_big_nohaplotig	CDS	15090334	15090534	100	+	0	ID=FBgn0085436.1.mrna1.cds2;Name=FBgn0085436.1;Parent=FBgn0085436.1.mrna1;Target=FBgn0085436.1 166 366 +
Chr2	stalkie_big_nohaplotig	CDS	15090602	15091090	99	+	0	ID=FBgn0085436.1.mrna1.cds3;Name=FBgn0085436.1;Parent=FBgn0085436.1.mrna1;Target=FBgn0085436.1 367 855 +
Chr2	stalkie_big_nohaplotig	CDS	15091156	15091597	99	+	0	ID=FBgn0085436.1.mrna1.cds4;Name=FBgn0085436.1;Parent=FBgn0085436.1.mrna1;Target=FBgn0085436.1 856 1297 +
Chr2	stalkie_big_nohaplotig	CDS	15091671	15092900	99	+	1	ID=FBgn0085436.1.mrna1.cds5;Name=FBgn0085436.1;Parent=FBgn0085436.1.mrna1;Target=FBgn0085436.1 1298 2527 +
Chr2	stalkie_big_nohaplotig	CDS	15092957	15093733	99	+	1	ID=FBgn0085436.1.mrna1.cds6;Name=FBgn0085436.1;Parent=FBgn0085436.1.mrna1;Target=FBgn0085436.1 2528 3304 +
Chr2	stalkie_big_nohaplotig	CDS	15094681	15096265	99	+	1	ID=FBgn0085436.1.mrna1.cds7;Name=FBgn0085436.1;Parent=FBgn0085436.1.mrna1;Target=FBgn0085436.1 3305 4889 +
Chr2	stalkie_big_nohaplotig	CDS	15096333	15097260	99	+	2	ID=FBgn0085436.1.mrna1.cds8;Name=FBgn0085436.1;Parent=FBgn0085436.1.mrna1;Target=FBgn0085436.1 4890 5817 +
Chr2	stalkie_big_nohaplotig	CDS	15097470	15098638	100	+	0	ID=FBgn0085436.1.mrna1.cds9;Name=FBgn0085436.1;Parent=FBgn0085436.1.mrna1;Target=FBgn0085436.1 5818 6986 +
Chr2	stalkie_big_nohaplotig	CDS	15098754	15099113	100	+	2	ID=FBgn0085436.1.mrna1.cds10;Name=FBgn0085436.1;Parent=FBgn0085436.1.mrna1;Target=FBgn0085436.1 6987 7346 +
Chr2	stalkie_big_nohaplotig	CDS	15099475	15099568	100	+	2	ID=FBgn0085436.1.mrna1.cds11;Name=FBgn0085436.1;Parent=FBgn0085436.1.mrna1;Target=FBgn0085436.1 7347 7440 +
Chr1	stalkie_big_nohaplotig	mRNA	115414766	115440477	.	-	.	ID=FBgn0261569.1.mrna1;Name=FBgn0261569.1;Parent=FBgn0261569.1.path1;Dir=sensecoverage=66.1;identity=99.9;matches=768;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	115439910	115440477	99	-	.	ID=FBgn0261569.1.mrna1.exon1;Name=FBgn0261569.1;Parent=FBgn0261569.1.mrna1;Target=FBgn0261569.1 1 568 +
Chr1	stalkie_big_nohaplotig	exon	115414766	115414966	100	-	.	ID=FBgn0261569.1.mrna1.exon2;Name=FBgn0261569.1;Parent=FBgn0261569.1.mrna1;Target=FBgn0261569.1 569 769 +
Chr1	stalkie_big_nohaplotig	CDS	115439910	115440477	99	-	0	ID=FBgn0261569.1.mrna1.cds1;Name=FBgn0261569.1;Parent=FBgn0261569.1.mrna1;Target=FBgn0261569.1 1 568 +
Chr1	stalkie_big_nohaplotig	CDS	115414767	115414966	100	-	1	ID=FBgn0261569.1.mrna1.cds2;Name=FBgn0261569.1;Parent=FBgn0261569.1.mrna1;Target=FBgn0261569.1 569 768 +
Chr1	stalkie_big_nohaplotig	mRNA	18595597	18616110	.	+	.	ID=FBgn0037100.1.mrna1;Name=FBgn0037100.1;Parent=FBgn0037100.1.path1;Dir=sensecoverage=66.7;identity=100.0;matches=1110;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	18595597	18595688	100	+	.	ID=FBgn0037100.1.mrna1.exon1;Name=FBgn0037100.1;Parent=FBgn0037100.1.mrna1;Target=FBgn0037100.1 556 647 +
Chr1	stalkie_big_nohaplotig	exon	18595810	18596009	100	+	.	ID=FBgn0037100.1.mrna1.exon2;Name=FBgn0037100.1;Parent=FBgn0037100.1.mrna1;Target=FBgn0037100.1 648 847 +
Chr1	stalkie_big_nohaplotig	exon	18596103	18596267	100	+	.	ID=FBgn0037100.1.mrna1.exon3;Name=FBgn0037100.1;Parent=FBgn0037100.1.mrna1;Target=FBgn0037100.1 848 1012 +
Chr1	stalkie_big_nohaplotig	exon	18596382	18596453	100	+	.	ID=FBgn0037100.1.mrna1.exon4;Name=FBgn0037100.1;Parent=FBgn0037100.1.mrna1;Target=FBgn0037100.1 1013 1084 +
Chr1	stalkie_big_nohaplotig	exon	18609057	18609201	100	+	.	ID=FBgn0037100.1.mrna1.exon5;Name=FBgn0037100.1;Parent=FBgn0037100.1.mrna1;Target=FBgn0037100.1 1085 1229 +
Chr1	stalkie_big_nohaplotig	exon	18609550	18609736	100	+	.	ID=FBgn0037100.1.mrna1.exon6;Name=FBgn0037100.1;Parent=FBgn0037100.1.mrna1;Target=FBgn0037100.1 1230 1416 +
Chr1	stalkie_big_nohaplotig	exon	18613412	18613522	100	+	.	ID=FBgn0037100.1.mrna1.exon7;Name=FBgn0037100.1;Parent=FBgn0037100.1.mrna1;Target=FBgn0037100.1 1417 1527 +
Chr1	stalkie_big_nohaplotig	exon	18615973	18616110	100	+	.	ID=FBgn0037100.1.mrna1.exon8;Name=FBgn0037100.1;Parent=FBgn0037100.1.mrna1;Target=FBgn0037100.1 1528 1665 +
Chr1	stalkie_big_nohaplotig	CDS	18595597	18595688	100	+	0	ID=FBgn0037100.1.mrna1.cds1;Name=FBgn0037100.1;Parent=FBgn0037100.1.mrna1;Target=FBgn0037100.1 556 647 +
Chr1	stalkie_big_nohaplotig	CDS	18595810	18596009	100	+	2	ID=FBgn0037100.1.mrna1.cds2;Name=FBgn0037100.1;Parent=FBgn0037100.1.mrna1;Target=FBgn0037100.1 648 847 +
Chr1	stalkie_big_nohaplotig	CDS	18596103	18596267	100	+	1	ID=FBgn0037100.1.mrna1.cds3;Name=FBgn0037100.1;Parent=FBgn0037100.1.mrna1;Target=FBgn0037100.1 848 1012 +
Chr1	stalkie_big_nohaplotig	CDS	18596382	18596453	100	+	1	ID=FBgn0037100.1.mrna1.cds4;Name=FBgn0037100.1;Parent=FBgn0037100.1.mrna1;Target=FBgn0037100.1 1013 1084 +
Chr1	stalkie_big_nohaplotig	CDS	18609057	18609201	100	+	1	ID=FBgn0037100.1.mrna1.cds5;Name=FBgn0037100.1;Parent=FBgn0037100.1.mrna1;Target=FBgn0037100.1 1085 1229 +
Chr1	stalkie_big_nohaplotig	CDS	18609550	18609736	100	+	2	ID=FBgn0037100.1.mrna1.cds6;Name=FBgn0037100.1;Parent=FBgn0037100.1.mrna1;Target=FBgn0037100.1 1230 1416 +
Chr1	stalkie_big_nohaplotig	CDS	18613412	18613522	100	+	0	ID=FBgn0037100.1.mrna1.cds7;Name=FBgn0037100.1;Parent=FBgn0037100.1.mrna1;Target=FBgn0037100.1 1417 1527 +
Chr1	stalkie_big_nohaplotig	CDS	18615973	18616110	100	+	0	ID=FBgn0037100.1.mrna1.cds8;Name=FBgn0037100.1;Parent=FBgn0037100.1.mrna1;Target=FBgn0037100.1 1528 1665 +
ChrX	stalkie_big_nohaplotig	mRNA	51981668	52063136	.	-	.	ID=FBgn0000180.1.mrna1;Name=FBgn0000180.1;Parent=FBgn0000180.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1986;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	52062922	52063136	100	-	.	ID=FBgn0000180.1.mrna1.exon1;Name=FBgn0000180.1;Parent=FBgn0000180.1.mrna1;Target=FBgn0000180.1 1 215 +
ChrX	stalkie_big_nohaplotig	exon	52050524	52050690	100	-	.	ID=FBgn0000180.1.mrna1.exon2;Name=FBgn0000180.1;Parent=FBgn0000180.1.mrna1;Target=FBgn0000180.1 216 382 +
ChrX	stalkie_big_nohaplotig	exon	52047010	52047136	100	-	.	ID=FBgn0000180.1.mrna1.exon3;Name=FBgn0000180.1;Parent=FBgn0000180.1.mrna1;Target=FBgn0000180.1 383 509 +
ChrX	stalkie_big_nohaplotig	exon	51984542	51984749	100	-	.	ID=FBgn0000180.1.mrna1.exon4;Name=FBgn0000180.1;Parent=FBgn0000180.1.mrna1;Target=FBgn0000180.1 510 717 +
ChrX	stalkie_big_nohaplotig	exon	51981668	51982936	100	-	.	ID=FBgn0000180.1.mrna1.exon5;Name=FBgn0000180.1;Parent=FBgn0000180.1.mrna1;Target=FBgn0000180.1 718 1986 +
ChrX	stalkie_big_nohaplotig	CDS	52062922	52063136	100	-	0	ID=FBgn0000180.1.mrna1.cds1;Name=FBgn0000180.1;Parent=FBgn0000180.1.mrna1;Target=FBgn0000180.1 1 215 +
ChrX	stalkie_big_nohaplotig	CDS	52050524	52050690	100	-	2	ID=FBgn0000180.1.mrna1.cds2;Name=FBgn0000180.1;Parent=FBgn0000180.1.mrna1;Target=FBgn0000180.1 216 382 +
ChrX	stalkie_big_nohaplotig	CDS	52047010	52047136	100	-	1	ID=FBgn0000180.1.mrna1.cds3;Name=FBgn0000180.1;Parent=FBgn0000180.1.mrna1;Target=FBgn0000180.1 383 509 +
ChrX	stalkie_big_nohaplotig	CDS	51984542	51984749	100	-	2	ID=FBgn0000180.1.mrna1.cds4;Name=FBgn0000180.1;Parent=FBgn0000180.1.mrna1;Target=FBgn0000180.1 510 717 +
ChrX	stalkie_big_nohaplotig	CDS	51981668	51982936	100	-	0	ID=FBgn0000180.1.mrna1.cds5;Name=FBgn0000180.1;Parent=FBgn0000180.1.mrna1;Target=FBgn0000180.1 718 1986 +
ChrX	stalkie_big_nohaplotig	mRNA	51905584	51914919	.	-	.	ID=FBgn0001987.1.mrna1;Name=FBgn0001987.1;Parent=FBgn0001987.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3099;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	51914651	51914919	100	-	.	ID=FBgn0001987.1.mrna1.exon1;Name=FBgn0001987.1;Parent=FBgn0001987.1.mrna1;Target=FBgn0001987.1 1 269 +
ChrX	stalkie_big_nohaplotig	exon	51914434	51914566	100	-	.	ID=FBgn0001987.1.mrna1.exon2;Name=FBgn0001987.1;Parent=FBgn0001987.1.mrna1;Target=FBgn0001987.1 270 402 +
ChrX	stalkie_big_nohaplotig	exon	51909311	51909739	100	-	.	ID=FBgn0001987.1.mrna1.exon3;Name=FBgn0001987.1;Parent=FBgn0001987.1.mrna1;Target=FBgn0001987.1 403 831 +
ChrX	stalkie_big_nohaplotig	exon	51906760	51907979	100	-	.	ID=FBgn0001987.1.mrna1.exon4;Name=FBgn0001987.1;Parent=FBgn0001987.1.mrna1;Target=FBgn0001987.1 832 2051 +
ChrX	stalkie_big_nohaplotig	exon	51906384	51906695	100	-	.	ID=FBgn0001987.1.mrna1.exon5;Name=FBgn0001987.1;Parent=FBgn0001987.1.mrna1;Target=FBgn0001987.1 2052 2363 +
ChrX	stalkie_big_nohaplotig	exon	51905584	51906319	100	-	.	ID=FBgn0001987.1.mrna1.exon6;Name=FBgn0001987.1;Parent=FBgn0001987.1.mrna1;Target=FBgn0001987.1 2364 3099 +
ChrX	stalkie_big_nohaplotig	CDS	51914651	51914919	100	-	0	ID=FBgn0001987.1.mrna1.cds1;Name=FBgn0001987.1;Parent=FBgn0001987.1.mrna1;Target=FBgn0001987.1 1 269 +
ChrX	stalkie_big_nohaplotig	CDS	51914434	51914566	100	-	2	ID=FBgn0001987.1.mrna1.cds2;Name=FBgn0001987.1;Parent=FBgn0001987.1.mrna1;Target=FBgn0001987.1 270 402 +
ChrX	stalkie_big_nohaplotig	CDS	51909311	51909739	100	-	0	ID=FBgn0001987.1.mrna1.cds3;Name=FBgn0001987.1;Parent=FBgn0001987.1.mrna1;Target=FBgn0001987.1 403 831 +
ChrX	stalkie_big_nohaplotig	CDS	51906760	51907979	100	-	0	ID=FBgn0001987.1.mrna1.cds4;Name=FBgn0001987.1;Parent=FBgn0001987.1.mrna1;Target=FBgn0001987.1 832 2051 +
ChrX	stalkie_big_nohaplotig	CDS	51906384	51906695	100	-	2	ID=FBgn0001987.1.mrna1.cds5;Name=FBgn0001987.1;Parent=FBgn0001987.1.mrna1;Target=FBgn0001987.1 2052 2363 +
ChrX	stalkie_big_nohaplotig	CDS	51905584	51906319	100	-	2	ID=FBgn0001987.1.mrna1.cds6;Name=FBgn0001987.1;Parent=FBgn0001987.1.mrna1;Target=FBgn0001987.1 2364 3099 +
ChrX	stalkie_big_nohaplotig	mRNA	52103266	52109409	.	+	.	ID=FBgn0032172.1.mrna1;Name=FBgn0032172.1;Parent=FBgn0032172.1.path1;Dir=sensecoverage=99.4;identity=100.0;matches=1285;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	52103266	52103610	100	+	.	ID=FBgn0032172.1.mrna1.exon1;Name=FBgn0032172.1;Parent=FBgn0032172.1.mrna1;Target=FBgn0032172.1 1 345 +
ChrX	stalkie_big_nohaplotig	exon	52103714	52103991	100	+	.	ID=FBgn0032172.1.mrna1.exon2;Name=FBgn0032172.1;Parent=FBgn0032172.1.mrna1;Target=FBgn0032172.1 346 623 +
ChrX	stalkie_big_nohaplotig	exon	52104168	52104303	100	+	.	ID=FBgn0032172.1.mrna1.exon3;Name=FBgn0032172.1;Parent=FBgn0032172.1.mrna1;Target=FBgn0032172.1 624 759 +
ChrX	stalkie_big_nohaplotig	exon	52104397	52104467	100	+	.	ID=FBgn0032172.1.mrna1.exon4;Name=FBgn0032172.1;Parent=FBgn0032172.1.mrna1;Target=FBgn0032172.1 760 830 +
ChrX	stalkie_big_nohaplotig	exon	52108685	52108784	100	+	.	ID=FBgn0032172.1.mrna1.exon5;Name=FBgn0032172.1;Parent=FBgn0032172.1.mrna1;Target=FBgn0032172.1 831 930 +
ChrX	stalkie_big_nohaplotig	exon	52109055	52109409	100	+	.	ID=FBgn0032172.1.mrna1.exon6;Name=FBgn0032172.1;Parent=FBgn0032172.1.mrna1;Target=FBgn0032172.1 931 1285 +
ChrX	stalkie_big_nohaplotig	CDS	52103266	52103610	100	+	0	ID=FBgn0032172.1.mrna1.cds1;Name=FBgn0032172.1;Parent=FBgn0032172.1.mrna1;Target=FBgn0032172.1 1 345 +
ChrX	stalkie_big_nohaplotig	CDS	52103714	52103991	100	+	0	ID=FBgn0032172.1.mrna1.cds2;Name=FBgn0032172.1;Parent=FBgn0032172.1.mrna1;Target=FBgn0032172.1 346 623 +
ChrX	stalkie_big_nohaplotig	CDS	52104168	52104303	100	+	2	ID=FBgn0032172.1.mrna1.cds3;Name=FBgn0032172.1;Parent=FBgn0032172.1.mrna1;Target=FBgn0032172.1 624 759 +
ChrX	stalkie_big_nohaplotig	CDS	52104397	52104467	100	+	0	ID=FBgn0032172.1.mrna1.cds4;Name=FBgn0032172.1;Parent=FBgn0032172.1.mrna1;Target=FBgn0032172.1 760 830 +
ChrX	stalkie_big_nohaplotig	CDS	52108685	52108784	100	+	2	ID=FBgn0032172.1.mrna1.cds5;Name=FBgn0032172.1;Parent=FBgn0032172.1.mrna1;Target=FBgn0032172.1 831 930 +
ChrX	stalkie_big_nohaplotig	CDS	52109055	52109408	100	+	0	ID=FBgn0032172.1.mrna1.cds6;Name=FBgn0032172.1;Parent=FBgn0032172.1.mrna1;Target=FBgn0032172.1 931 1284 +
Chr1	stalkie_big_nohaplotig	mRNA	44540291	44542402	.	+	.	ID=FBgn0036423.1.mrna1;Name=FBgn0036423.1;Parent=FBgn0036423.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1410;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	44540291	44540477	100	+	.	ID=FBgn0036423.1.mrna1.exon1;Name=FBgn0036423.1;Parent=FBgn0036423.1.mrna1;Target=FBgn0036423.1 1 187 +
Chr1	stalkie_big_nohaplotig	exon	44541116	44541783	100	+	.	ID=FBgn0036423.1.mrna1.exon2;Name=FBgn0036423.1;Parent=FBgn0036423.1.mrna1;Target=FBgn0036423.1 188 855 +
Chr1	stalkie_big_nohaplotig	exon	44541848	44542402	100	+	.	ID=FBgn0036423.1.mrna1.exon3;Name=FBgn0036423.1;Parent=FBgn0036423.1.mrna1;Target=FBgn0036423.1 856 1410 +
Chr1	stalkie_big_nohaplotig	CDS	44540291	44540477	100	+	0	ID=FBgn0036423.1.mrna1.cds1;Name=FBgn0036423.1;Parent=FBgn0036423.1.mrna1;Target=FBgn0036423.1 1 187 +
Chr1	stalkie_big_nohaplotig	CDS	44541116	44541783	100	+	1	ID=FBgn0036423.1.mrna1.cds2;Name=FBgn0036423.1;Parent=FBgn0036423.1.mrna1;Target=FBgn0036423.1 188 855 +
Chr1	stalkie_big_nohaplotig	CDS	44541848	44542402	100	+	0	ID=FBgn0036423.1.mrna1.cds3;Name=FBgn0036423.1;Parent=FBgn0036423.1.mrna1;Target=FBgn0036423.1 856 1410 +
Chr1	stalkie_big_nohaplotig	mRNA	134048299	134049500	.	-	.	ID=FBgn0022724.1.mrna1;Name=FBgn0022724.1;Parent=FBgn0022724.1.path1;Dir=sensecoverage=100.0;identity=97.9;matches=928;mismatches=8;indels=12;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	134049356	134049500	97	-	.	ID=FBgn0022724.1.mrna1.exon1;Name=FBgn0022724.1;Parent=FBgn0022724.1.mrna1;Target=FBgn0022724.1 1 145 +
Chr1	stalkie_big_nohaplotig	exon	134048995	134049281	99	-	.	ID=FBgn0022724.1.mrna1.exon2;Name=FBgn0022724.1;Parent=FBgn0022724.1.mrna1;Target=FBgn0022724.1 146 432 +
Chr1	stalkie_big_nohaplotig	exon	134048779	134048926	100	-	.	ID=FBgn0022724.1.mrna1.exon3;Name=FBgn0022724.1;Parent=FBgn0022724.1.mrna1;Target=FBgn0022724.1 433 580 +
Chr1	stalkie_big_nohaplotig	exon	134048590	134048718	98	-	.	ID=FBgn0022724.1.mrna1.exon4;Name=FBgn0022724.1;Parent=FBgn0022724.1.mrna1;Target=FBgn0022724.1 581 709 +
Chr1	stalkie_big_nohaplotig	exon	134048299	134048531	94	-	.	ID=FBgn0022724.1.mrna1.exon5;Name=FBgn0022724.1;Parent=FBgn0022724.1.mrna1;Target=FBgn0022724.1 710 942 +
Chr1	stalkie_big_nohaplotig	CDS	134049356	134049500	97	-	0	ID=FBgn0022724.1.mrna1.cds1;Name=FBgn0022724.1;Parent=FBgn0022724.1.mrna1;Target=FBgn0022724.1 1 145 +
Chr1	stalkie_big_nohaplotig	CDS	134048995	134049281	99	-	1	ID=FBgn0022724.1.mrna1.cds2;Name=FBgn0022724.1;Parent=FBgn0022724.1.mrna1;Target=FBgn0022724.1 146 432 +
Chr1	stalkie_big_nohaplotig	CDS	134048779	134048926	100	-	0	ID=FBgn0022724.1.mrna1.cds3;Name=FBgn0022724.1;Parent=FBgn0022724.1.mrna1;Target=FBgn0022724.1 433 580 +
Chr1	stalkie_big_nohaplotig	CDS	134048590	134048718	98	-	1	ID=FBgn0022724.1.mrna1.cds4;Name=FBgn0022724.1;Parent=FBgn0022724.1.mrna1;Target=FBgn0022724.1 581 709 +
Chr1	stalkie_big_nohaplotig	CDS	134048299	134048531	94	-	1	ID=FBgn0022724.1.mrna1.cds5;Name=FBgn0022724.1;Parent=FBgn0022724.1.mrna1;Target=FBgn0022724.1 710 942 +
Chr1	stalkie_big_nohaplotig	mRNA	134068520	134068741	.	+	.	ID=FBgn0033691.1.mrna1;Name=FBgn0033691.1;Parent=FBgn0033691.1.path1;Dir=indeterminatecoverage=100.0;identity=100.0;matches=222;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	134068520	134068741	100	+	.	ID=FBgn0033691.1.mrna1.exon1;Name=FBgn0033691.1;Parent=FBgn0033691.1.mrna1;Target=FBgn0033691.1 222 1 .
Chr1	stalkie_big_nohaplotig	CDS	134068520	134068741	100	+	0	ID=FBgn0033691.1.mrna1.cds1;Name=FBgn0033691.1;Parent=FBgn0033691.1.mrna1;Target=FBgn0033691.1 222 1 .
Chr1	stalkie_big_nohaplotig	mRNA	129564525	129599366	.	-	.	ID=FBgn0011754.1.mrna1;Name=FBgn0011754.1;Parent=FBgn0011754.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1304;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	129599227	129599366	100	-	.	ID=FBgn0011754.1.mrna1.exon1;Name=FBgn0011754.1;Parent=FBgn0011754.1.mrna1;Target=FBgn0011754.1 1 140 +
Chr1	stalkie_big_nohaplotig	exon	129574375	129574553	100	-	.	ID=FBgn0011754.1.mrna1.exon2;Name=FBgn0011754.1;Parent=FBgn0011754.1.mrna1;Target=FBgn0011754.1 141 319 +
Chr1	stalkie_big_nohaplotig	exon	129574018	129574302	100	-	.	ID=FBgn0011754.1.mrna1.exon3;Name=FBgn0011754.1;Parent=FBgn0011754.1.mrna1;Target=FBgn0011754.1 320 604 +
Chr1	stalkie_big_nohaplotig	exon	129573850	129573940	100	-	.	ID=FBgn0011754.1.mrna1.exon4;Name=FBgn0011754.1;Parent=FBgn0011754.1.mrna1;Target=FBgn0011754.1 605 695 +
Chr1	stalkie_big_nohaplotig	exon	129573639	129573775	99	-	.	ID=FBgn0011754.1.mrna1.exon5;Name=FBgn0011754.1;Parent=FBgn0011754.1.mrna1;Target=FBgn0011754.1 696 832 +
Chr1	stalkie_big_nohaplotig	exon	129572138	129572235	100	-	.	ID=FBgn0011754.1.mrna1.exon6;Name=FBgn0011754.1;Parent=FBgn0011754.1.mrna1;Target=FBgn0011754.1 833 930 +
Chr1	stalkie_big_nohaplotig	exon	129571519	129571602	100	-	.	ID=FBgn0011754.1.mrna1.exon7;Name=FBgn0011754.1;Parent=FBgn0011754.1.mrna1;Target=FBgn0011754.1 931 1014 +
Chr1	stalkie_big_nohaplotig	exon	129564722	129564880	100	-	.	ID=FBgn0011754.1.mrna1.exon8;Name=FBgn0011754.1;Parent=FBgn0011754.1.mrna1;Target=FBgn0011754.1 1015 1173 +
Chr1	stalkie_big_nohaplotig	exon	129564525	129564656	100	-	.	ID=FBgn0011754.1.mrna1.exon9;Name=FBgn0011754.1;Parent=FBgn0011754.1.mrna1;Target=FBgn0011754.1 1174 1305 +
Chr1	stalkie_big_nohaplotig	CDS	129599227	129599366	100	-	0	ID=FBgn0011754.1.mrna1.cds1;Name=FBgn0011754.1;Parent=FBgn0011754.1.mrna1;Target=FBgn0011754.1 1 140 +
Chr1	stalkie_big_nohaplotig	CDS	129574375	129574553	100	-	2	ID=FBgn0011754.1.mrna1.cds2;Name=FBgn0011754.1;Parent=FBgn0011754.1.mrna1;Target=FBgn0011754.1 141 319 +
Chr1	stalkie_big_nohaplotig	CDS	129574018	129574302	100	-	1	ID=FBgn0011754.1.mrna1.cds3;Name=FBgn0011754.1;Parent=FBgn0011754.1.mrna1;Target=FBgn0011754.1 320 604 +
Chr1	stalkie_big_nohaplotig	CDS	129573850	129573940	100	-	1	ID=FBgn0011754.1.mrna1.cds4;Name=FBgn0011754.1;Parent=FBgn0011754.1.mrna1;Target=FBgn0011754.1 605 695 +
Chr1	stalkie_big_nohaplotig	CDS	129573639	129573775	99	-	2	ID=FBgn0011754.1.mrna1.cds5;Name=FBgn0011754.1;Parent=FBgn0011754.1.mrna1;Target=FBgn0011754.1 696 832 +
Chr1	stalkie_big_nohaplotig	CDS	129572138	129572235	100	-	1	ID=FBgn0011754.1.mrna1.cds6;Name=FBgn0011754.1;Parent=FBgn0011754.1.mrna1;Target=FBgn0011754.1 833 930 +
Chr1	stalkie_big_nohaplotig	CDS	129571519	129571602	100	-	0	ID=FBgn0011754.1.mrna1.cds7;Name=FBgn0011754.1;Parent=FBgn0011754.1.mrna1;Target=FBgn0011754.1 931 1014 +
Chr1	stalkie_big_nohaplotig	CDS	129564722	129564880	100	-	0	ID=FBgn0011754.1.mrna1.cds8;Name=FBgn0011754.1;Parent=FBgn0011754.1.mrna1;Target=FBgn0011754.1 1015 1173 +
Chr1	stalkie_big_nohaplotig	CDS	129564525	129564656	100	-	0	ID=FBgn0011754.1.mrna1.cds9;Name=FBgn0011754.1;Parent=FBgn0011754.1.mrna1;Target=FBgn0011754.1 1174 1305 +
Chr1	stalkie_big_nohaplotig	mRNA	129665414	129669362	.	-	.	ID=FBgn0030240.1.mrna1;Name=FBgn0030240.1;Parent=FBgn0030240.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=2469;mismatches=9;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	129668674	129669362	99	-	.	ID=FBgn0030240.1.mrna1.exon1;Name=FBgn0030240.1;Parent=FBgn0030240.1.mrna1;Target=FBgn0030240.1 1 689 +
Chr1	stalkie_big_nohaplotig	exon	129667570	129667787	100	-	.	ID=FBgn0030240.1.mrna1.exon2;Name=FBgn0030240.1;Parent=FBgn0030240.1.mrna1;Target=FBgn0030240.1 690 907 +
Chr1	stalkie_big_nohaplotig	exon	129667064	129667214	100	-	.	ID=FBgn0030240.1.mrna1.exon3;Name=FBgn0030240.1;Parent=FBgn0030240.1.mrna1;Target=FBgn0030240.1 908 1058 +
Chr1	stalkie_big_nohaplotig	exon	129666857	129667008	100	-	.	ID=FBgn0030240.1.mrna1.exon4;Name=FBgn0030240.1;Parent=FBgn0030240.1.mrna1;Target=FBgn0030240.1 1059 1210 +
Chr1	stalkie_big_nohaplotig	exon	129666068	129666803	99	-	.	ID=FBgn0030240.1.mrna1.exon5;Name=FBgn0030240.1;Parent=FBgn0030240.1.mrna1;Target=FBgn0030240.1 1211 1946 +
Chr1	stalkie_big_nohaplotig	exon	129665926	129666006	100	-	.	ID=FBgn0030240.1.mrna1.exon6;Name=FBgn0030240.1;Parent=FBgn0030240.1.mrna1;Target=FBgn0030240.1 1947 2027 +
Chr1	stalkie_big_nohaplotig	exon	129665414	129665864	99	-	.	ID=FBgn0030240.1.mrna1.exon7;Name=FBgn0030240.1;Parent=FBgn0030240.1.mrna1;Target=FBgn0030240.1 2028 2478 +
Chr1	stalkie_big_nohaplotig	CDS	129668674	129669362	99	-	0	ID=FBgn0030240.1.mrna1.cds1;Name=FBgn0030240.1;Parent=FBgn0030240.1.mrna1;Target=FBgn0030240.1 1 689 +
Chr1	stalkie_big_nohaplotig	CDS	129667570	129667787	100	-	2	ID=FBgn0030240.1.mrna1.cds2;Name=FBgn0030240.1;Parent=FBgn0030240.1.mrna1;Target=FBgn0030240.1 690 907 +
Chr1	stalkie_big_nohaplotig	CDS	129667064	129667214	100	-	1	ID=FBgn0030240.1.mrna1.cds3;Name=FBgn0030240.1;Parent=FBgn0030240.1.mrna1;Target=FBgn0030240.1 908 1058 +
Chr1	stalkie_big_nohaplotig	CDS	129666857	129667008	100	-	2	ID=FBgn0030240.1.mrna1.cds4;Name=FBgn0030240.1;Parent=FBgn0030240.1.mrna1;Target=FBgn0030240.1 1059 1210 +
Chr1	stalkie_big_nohaplotig	CDS	129666068	129666803	99	-	1	ID=FBgn0030240.1.mrna1.cds5;Name=FBgn0030240.1;Parent=FBgn0030240.1.mrna1;Target=FBgn0030240.1 1211 1946 +
Chr1	stalkie_big_nohaplotig	CDS	129665926	129666006	100	-	2	ID=FBgn0030240.1.mrna1.cds6;Name=FBgn0030240.1;Parent=FBgn0030240.1.mrna1;Target=FBgn0030240.1 1947 2027 +
Chr1	stalkie_big_nohaplotig	CDS	129665414	129665864	99	-	2	ID=FBgn0030240.1.mrna1.cds7;Name=FBgn0030240.1;Parent=FBgn0030240.1.mrna1;Target=FBgn0030240.1 2028 2478 +
Chr1	stalkie_big_nohaplotig	mRNA	129659462	129661074	.	-	.	ID=FBgn0030241.1.mrna1;Name=FBgn0030241.1;Parent=FBgn0030241.1.path1;Dir=indeterminatecoverage=100.0;identity=98.8;matches=1595;mismatches=18;indels=1;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	129659462	129661074	98	-	.	ID=FBgn0030241.1.mrna1.exon1;Name=FBgn0030241.1;Parent=FBgn0030241.1.mrna1;Target=FBgn0030241.1 1614 1 .
Chr1	stalkie_big_nohaplotig	CDS	129659462	129661074	98	-	0	ID=FBgn0030241.1.mrna1.cds1;Name=FBgn0030241.1;Parent=FBgn0030241.1.mrna1;Target=FBgn0030241.1 1614 1 .
Chr1	stalkie_big_nohaplotig	mRNA	129243610	129255968	.	+	.	ID=FBgn0039006.1.mrna1;Name=FBgn0039006.1;Parent=FBgn0039006.1.path1;Dir=sensecoverage=99.9;identity=98.6;matches=1524;mismatches=22;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	129243610	129244145	99	+	.	ID=FBgn0039006.1.mrna1.exon1;Name=FBgn0039006.1;Parent=FBgn0039006.1.mrna1;Target=FBgn0039006.1 1 536 +
Chr1	stalkie_big_nohaplotig	exon	129244207	129244359	100	+	.	ID=FBgn0039006.1.mrna1.exon2;Name=FBgn0039006.1;Parent=FBgn0039006.1.mrna1;Target=FBgn0039006.1 537 689 +
Chr1	stalkie_big_nohaplotig	exon	129245207	129245540	97	+	.	ID=FBgn0039006.1.mrna1.exon3;Name=FBgn0039006.1;Parent=FBgn0039006.1.mrna1;Target=FBgn0039006.1 690 1023 +
Chr1	stalkie_big_nohaplotig	exon	129250647	129250755	100	+	.	ID=FBgn0039006.1.mrna1.exon4;Name=FBgn0039006.1;Parent=FBgn0039006.1.mrna1;Target=FBgn0039006.1 1024 1132 +
Chr1	stalkie_big_nohaplotig	exon	129255555	129255968	96	+	.	ID=FBgn0039006.1.mrna1.exon5;Name=FBgn0039006.1;Parent=FBgn0039006.1.mrna1;Target=FBgn0039006.1 1133 1546 +
Chr1	stalkie_big_nohaplotig	CDS	129243610	129244145	99	+	0	ID=FBgn0039006.1.mrna1.cds1;Name=FBgn0039006.1;Parent=FBgn0039006.1.mrna1;Target=FBgn0039006.1 1 536 +
Chr1	stalkie_big_nohaplotig	CDS	129244207	129244359	100	+	2	ID=FBgn0039006.1.mrna1.cds2;Name=FBgn0039006.1;Parent=FBgn0039006.1.mrna1;Target=FBgn0039006.1 537 689 +
Chr1	stalkie_big_nohaplotig	CDS	129245207	129245540	97	+	2	ID=FBgn0039006.1.mrna1.cds3;Name=FBgn0039006.1;Parent=FBgn0039006.1.mrna1;Target=FBgn0039006.1 690 1023 +
Chr1	stalkie_big_nohaplotig	CDS	129250647	129250755	100	+	0	ID=FBgn0039006.1.mrna1.cds4;Name=FBgn0039006.1;Parent=FBgn0039006.1.mrna1;Target=FBgn0039006.1 1024 1132 +
Chr1	stalkie_big_nohaplotig	CDS	129255555	129255967	96	+	1	ID=FBgn0039006.1.mrna1.cds5;Name=FBgn0039006.1;Parent=FBgn0039006.1.mrna1;Target=FBgn0039006.1 1133 1545 +
ChrX	stalkie_big_nohaplotig	mRNA	18863433	18863882	.	+	.	ID=FBgn0031977.1.mrna1;Name=FBgn0031977.1;Parent=FBgn0031977.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=288;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	18863433	18863576	100	+	.	ID=FBgn0031977.1.mrna1.exon1;Name=FBgn0031977.1;Parent=FBgn0031977.1.mrna1;Target=FBgn0031977.1 1 144 +
ChrX	stalkie_big_nohaplotig	exon	18863739	18863882	100	+	.	ID=FBgn0031977.1.mrna1.exon2;Name=FBgn0031977.1;Parent=FBgn0031977.1.mrna1;Target=FBgn0031977.1 145 288 +
ChrX	stalkie_big_nohaplotig	CDS	18863433	18863576	100	+	0	ID=FBgn0031977.1.mrna1.cds1;Name=FBgn0031977.1;Parent=FBgn0031977.1.mrna1;Target=FBgn0031977.1 1 144 +
ChrX	stalkie_big_nohaplotig	CDS	18863739	18863882	100	+	0	ID=FBgn0031977.1.mrna1.cds2;Name=FBgn0031977.1;Parent=FBgn0031977.1.mrna1;Target=FBgn0031977.1 145 288 +
ChrX	stalkie_big_nohaplotig	mRNA	18960580	18966620	.	-	.	ID=FBgn0051678.1.mrna1;Name=FBgn0051678.1;Parent=FBgn0051678.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=2627;mismatches=2;indels=2;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	18964888	18966620	99	-	.	ID=FBgn0051678.1.mrna1.exon1;Name=FBgn0051678.1;Parent=FBgn0051678.1.mrna1;Target=FBgn0051678.1 1 1734 +
ChrX	stalkie_big_nohaplotig	exon	18960792	18961539	100	-	.	ID=FBgn0051678.1.mrna1.exon2;Name=FBgn0051678.1;Parent=FBgn0051678.1.mrna1;Target=FBgn0051678.1 1735 2482 +
ChrX	stalkie_big_nohaplotig	exon	18960580	18960727	99	-	.	ID=FBgn0051678.1.mrna1.exon3;Name=FBgn0051678.1;Parent=FBgn0051678.1.mrna1;Target=FBgn0051678.1 2483 2631 +
ChrX	stalkie_big_nohaplotig	CDS	18966440	18966618	99	-	0	ID=FBgn0051678.1.mrna1.cds1;Name=FBgn0051678.1;Parent=FBgn0051678.1.mrna1;Target=FBgn0051678.1 3 182 +
ChrX	stalkie_big_nohaplotig	mRNA	18822886	18824598	.	-	.	ID=ORF2769.mrna1;Name=ORF2769;Parent=ORF2769.path1;Dir=sensecoverage=100.0;identity=99.9;matches=806;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	18824368	18824598	100	-	.	ID=ORF2769.mrna1.exon1;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 1 231 +
ChrX	stalkie_big_nohaplotig	exon	18824231	18824312	100	-	.	ID=ORF2769.mrna1.exon2;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 232 313 +
ChrX	stalkie_big_nohaplotig	exon	18824096	18824151	100	-	.	ID=ORF2769.mrna1.exon3;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 314 369 +
ChrX	stalkie_big_nohaplotig	exon	18823970	18824024	100	-	.	ID=ORF2769.mrna1.exon4;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 370 424 +
ChrX	stalkie_big_nohaplotig	exon	18823844	18823878	100	-	.	ID=ORF2769.mrna1.exon5;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 425 459 +
ChrX	stalkie_big_nohaplotig	exon	18823735	18823762	100	-	.	ID=ORF2769.mrna1.exon6;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 460 487 +
ChrX	stalkie_big_nohaplotig	exon	18823607	18823663	98	-	.	ID=ORF2769.mrna1.exon7;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 488 544 +
ChrX	stalkie_big_nohaplotig	exon	18823490	18823512	100	-	.	ID=ORF2769.mrna1.exon8;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 545 567 +
ChrX	stalkie_big_nohaplotig	exon	18823392	18823428	100	-	.	ID=ORF2769.mrna1.exon9;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 568 604 +
ChrX	stalkie_big_nohaplotig	exon	18823265	18823323	100	-	.	ID=ORF2769.mrna1.exon10;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 605 663 +
ChrX	stalkie_big_nohaplotig	exon	18823140	18823167	100	-	.	ID=ORF2769.mrna1.exon11;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 664 691 +
ChrX	stalkie_big_nohaplotig	exon	18823009	18823068	100	-	.	ID=ORF2769.mrna1.exon12;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 692 751 +
ChrX	stalkie_big_nohaplotig	exon	18822886	18822941	100	-	.	ID=ORF2769.mrna1.exon13;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 752 807 +
ChrX	stalkie_big_nohaplotig	CDS	18824368	18824598	100	-	0	ID=ORF2769.mrna1.cds1;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 1 231 +
ChrX	stalkie_big_nohaplotig	CDS	18824231	18824312	100	-	0	ID=ORF2769.mrna1.cds2;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 232 313 +
ChrX	stalkie_big_nohaplotig	CDS	18824096	18824151	100	-	1	ID=ORF2769.mrna1.cds3;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 314 369 +
ChrX	stalkie_big_nohaplotig	CDS	18823970	18824024	100	-	0	ID=ORF2769.mrna1.cds4;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 370 424 +
ChrX	stalkie_big_nohaplotig	CDS	18823844	18823878	100	-	1	ID=ORF2769.mrna1.cds5;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 425 459 +
ChrX	stalkie_big_nohaplotig	CDS	18823735	18823762	100	-	0	ID=ORF2769.mrna1.cds6;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 460 487 +
ChrX	stalkie_big_nohaplotig	CDS	18823607	18823663	98	-	1	ID=ORF2769.mrna1.cds7;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 488 544 +
ChrX	stalkie_big_nohaplotig	CDS	18823490	18823512	100	-	1	ID=ORF2769.mrna1.cds8;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 545 567 +
ChrX	stalkie_big_nohaplotig	CDS	18823392	18823428	100	-	0	ID=ORF2769.mrna1.cds9;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 568 604 +
ChrX	stalkie_big_nohaplotig	CDS	18823265	18823323	100	-	1	ID=ORF2769.mrna1.cds10;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 605 663 +
ChrX	stalkie_big_nohaplotig	CDS	18823140	18823167	100	-	0	ID=ORF2769.mrna1.cds11;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 664 691 +
ChrX	stalkie_big_nohaplotig	CDS	18823009	18823068	100	-	1	ID=ORF2769.mrna1.cds12;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 692 751 +
ChrX	stalkie_big_nohaplotig	CDS	18822886	18822941	100	-	1	ID=ORF2769.mrna1.cds13;Name=ORF2769;Parent=ORF2769.mrna1;Target=ORF2769 752 807 +
Chr2	stalkie_big_nohaplotig	mRNA	102622974	102623448	.	-	.	ID=FBgn0038290.mrna1;Name=FBgn0038290;Parent=FBgn0038290.path1;Dir=sensecoverage=100.0;identity=100.0;matches=414;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	102623229	102623448	100	-	.	ID=FBgn0038290.mrna1.exon1;Name=FBgn0038290;Parent=FBgn0038290.mrna1;Target=FBgn0038290 1 220 +
Chr2	stalkie_big_nohaplotig	exon	102622974	102623167	100	-	.	ID=FBgn0038290.mrna1.exon2;Name=FBgn0038290;Parent=FBgn0038290.mrna1;Target=FBgn0038290 221 414 +
Chr2	stalkie_big_nohaplotig	CDS	102623229	102623448	100	-	0	ID=FBgn0038290.mrna1.cds1;Name=FBgn0038290;Parent=FBgn0038290.mrna1;Target=FBgn0038290 1 220 +
Chr2	stalkie_big_nohaplotig	CDS	102622974	102623167	100	-	1	ID=FBgn0038290.mrna1.cds2;Name=FBgn0038290;Parent=FBgn0038290.mrna1;Target=FBgn0038290 221 414 +
Chr2	stalkie_big_nohaplotig	mRNA	102570492	102582152	.	-	.	ID=FBgn0261859.1.mrna1;Name=FBgn0261859.1;Parent=FBgn0261859.1.path1;Dir=sensecoverage=99.6;identity=100.0;matches=4910;mismatches=1;indels=0;unknowns=1
Chr2	stalkie_big_nohaplotig	exon	102581706	102582152	100	-	.	ID=FBgn0261859.1.mrna1.exon1;Name=FBgn0261859.1;Parent=FBgn0261859.1.mrna1;Target=FBgn0261859.1 21 467 +
Chr2	stalkie_big_nohaplotig	exon	102576790	102576906	100	-	.	ID=FBgn0261859.1.mrna1.exon2;Name=FBgn0261859.1;Parent=FBgn0261859.1.mrna1;Target=FBgn0261859.1 468 584 +
Chr2	stalkie_big_nohaplotig	exon	102576553	102576733	100	-	.	ID=FBgn0261859.1.mrna1.exon3;Name=FBgn0261859.1;Parent=FBgn0261859.1.mrna1;Target=FBgn0261859.1 585 765 +
Chr2	stalkie_big_nohaplotig	exon	102576239	102576490	100	-	.	ID=FBgn0261859.1.mrna1.exon4;Name=FBgn0261859.1;Parent=FBgn0261859.1.mrna1;Target=FBgn0261859.1 766 1017 +
Chr2	stalkie_big_nohaplotig	exon	102574920	102575036	100	-	.	ID=FBgn0261859.1.mrna1.exon5;Name=FBgn0261859.1;Parent=FBgn0261859.1.mrna1;Target=FBgn0261859.1 1018 1134 +
Chr2	stalkie_big_nohaplotig	exon	102574678	102574809	100	-	.	ID=FBgn0261859.1.mrna1.exon6;Name=FBgn0261859.1;Parent=FBgn0261859.1.mrna1;Target=FBgn0261859.1 1135 1266 +
Chr2	stalkie_big_nohaplotig	exon	102574347	102574606	100	-	.	ID=FBgn0261859.1.mrna1.exon7;Name=FBgn0261859.1;Parent=FBgn0261859.1.mrna1;Target=FBgn0261859.1 1267 1526 +
Chr2	stalkie_big_nohaplotig	exon	102574125	102574269	100	-	.	ID=FBgn0261859.1.mrna1.exon8;Name=FBgn0261859.1;Parent=FBgn0261859.1.mrna1;Target=FBgn0261859.1 1527 1671 +
Chr2	stalkie_big_nohaplotig	exon	102573920	102574069	100	-	.	ID=FBgn0261859.1.mrna1.exon9;Name=FBgn0261859.1;Parent=FBgn0261859.1.mrna1;Target=FBgn0261859.1 1672 1821 +
Chr2	stalkie_big_nohaplotig	exon	102573479	102573656	100	-	.	ID=FBgn0261859.1.mrna1.exon10;Name=FBgn0261859.1;Parent=FBgn0261859.1.mrna1;Target=FBgn0261859.1 1822 1999 +
Chr2	stalkie_big_nohaplotig	exon	102570492	102573424	99	-	.	ID=FBgn0261859.1.mrna1.exon11;Name=FBgn0261859.1;Parent=FBgn0261859.1.mrna1;Target=FBgn0261859.1 2000 4932 +
Chr2	stalkie_big_nohaplotig	CDS	102581706	102582151	100	-	0	ID=FBgn0261859.1.mrna1.cds1;Name=FBgn0261859.1;Parent=FBgn0261859.1.mrna1;Target=FBgn0261859.1 22 467 +
Chr2	stalkie_big_nohaplotig	CDS	102576790	102576906	100	-	2	ID=FBgn0261859.1.mrna1.cds2;Name=FBgn0261859.1;Parent=FBgn0261859.1.mrna1;Target=FBgn0261859.1 468 584 +
Chr2	stalkie_big_nohaplotig	CDS	102576553	102576733	100	-	2	ID=FBgn0261859.1.mrna1.cds3;Name=FBgn0261859.1;Parent=FBgn0261859.1.mrna1;Target=FBgn0261859.1 585 765 +
Chr2	stalkie_big_nohaplotig	CDS	102576239	102576490	100	-	0	ID=FBgn0261859.1.mrna1.cds4;Name=FBgn0261859.1;Parent=FBgn0261859.1.mrna1;Target=FBgn0261859.1 766 1017 +
Chr2	stalkie_big_nohaplotig	CDS	102574920	102575036	100	-	0	ID=FBgn0261859.1.mrna1.cds5;Name=FBgn0261859.1;Parent=FBgn0261859.1.mrna1;Target=FBgn0261859.1 1018 1134 +
Chr2	stalkie_big_nohaplotig	CDS	102574678	102574809	100	-	0	ID=FBgn0261859.1.mrna1.cds6;Name=FBgn0261859.1;Parent=FBgn0261859.1.mrna1;Target=FBgn0261859.1 1135 1266 +
Chr2	stalkie_big_nohaplotig	CDS	102574347	102574606	100	-	0	ID=FBgn0261859.1.mrna1.cds7;Name=FBgn0261859.1;Parent=FBgn0261859.1.mrna1;Target=FBgn0261859.1 1267 1526 +
Chr2	stalkie_big_nohaplotig	CDS	102574125	102574269	100	-	2	ID=FBgn0261859.1.mrna1.cds8;Name=FBgn0261859.1;Parent=FBgn0261859.1.mrna1;Target=FBgn0261859.1 1527 1671 +
Chr2	stalkie_big_nohaplotig	CDS	102573920	102574069	100	-	0	ID=FBgn0261859.1.mrna1.cds9;Name=FBgn0261859.1;Parent=FBgn0261859.1.mrna1;Target=FBgn0261859.1 1672 1821 +
Chr2	stalkie_big_nohaplotig	CDS	102573479	102573656	100	-	0	ID=FBgn0261859.1.mrna1.cds10;Name=FBgn0261859.1;Parent=FBgn0261859.1.mrna1;Target=FBgn0261859.1 1822 1999 +
Chr2	stalkie_big_nohaplotig	CDS	102570492	102573424	99	-	1	ID=FBgn0261859.1.mrna1.cds11;Name=FBgn0261859.1;Parent=FBgn0261859.1.mrna1;Target=FBgn0261859.1 2000 4932 +
ChrX	stalkie_big_nohaplotig	mRNA	75478073	75484916	.	-	.	ID=FBgn0032216.1.mrna1;Name=FBgn0032216.1;Parent=FBgn0032216.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1461;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	75484895	75484916	100	-	.	ID=FBgn0032216.1.mrna1.exon1;Name=FBgn0032216.1;Parent=FBgn0032216.1.mrna1;Target=FBgn0032216.1 1 22 +
ChrX	stalkie_big_nohaplotig	exon	75484650	75484825	100	-	.	ID=FBgn0032216.1.mrna1.exon2;Name=FBgn0032216.1;Parent=FBgn0032216.1.mrna1;Target=FBgn0032216.1 23 198 +
ChrX	stalkie_big_nohaplotig	exon	75484480	75484587	100	-	.	ID=FBgn0032216.1.mrna1.exon3;Name=FBgn0032216.1;Parent=FBgn0032216.1.mrna1;Target=FBgn0032216.1 199 306 +
ChrX	stalkie_big_nohaplotig	exon	75483677	75484059	100	-	.	ID=FBgn0032216.1.mrna1.exon4;Name=FBgn0032216.1;Parent=FBgn0032216.1.mrna1;Target=FBgn0032216.1 307 689 +
ChrX	stalkie_big_nohaplotig	exon	75483440	75483596	100	-	.	ID=FBgn0032216.1.mrna1.exon5;Name=FBgn0032216.1;Parent=FBgn0032216.1.mrna1;Target=FBgn0032216.1 690 846 +
ChrX	stalkie_big_nohaplotig	exon	75478694	75478759	100	-	.	ID=FBgn0032216.1.mrna1.exon6;Name=FBgn0032216.1;Parent=FBgn0032216.1.mrna1;Target=FBgn0032216.1 847 912 +
ChrX	stalkie_big_nohaplotig	exon	75478073	75478621	100	-	.	ID=FBgn0032216.1.mrna1.exon7;Name=FBgn0032216.1;Parent=FBgn0032216.1.mrna1;Target=FBgn0032216.1 913 1461 +
ChrX	stalkie_big_nohaplotig	CDS	75484895	75484916	100	-	0	ID=FBgn0032216.1.mrna1.cds1;Name=FBgn0032216.1;Parent=FBgn0032216.1.mrna1;Target=FBgn0032216.1 1 22 +
ChrX	stalkie_big_nohaplotig	CDS	75484650	75484825	100	-	1	ID=FBgn0032216.1.mrna1.cds2;Name=FBgn0032216.1;Parent=FBgn0032216.1.mrna1;Target=FBgn0032216.1 23 198 +
ChrX	stalkie_big_nohaplotig	CDS	75484480	75484587	100	-	0	ID=FBgn0032216.1.mrna1.cds3;Name=FBgn0032216.1;Parent=FBgn0032216.1.mrna1;Target=FBgn0032216.1 199 306 +
ChrX	stalkie_big_nohaplotig	CDS	75483677	75484059	100	-	0	ID=FBgn0032216.1.mrna1.cds4;Name=FBgn0032216.1;Parent=FBgn0032216.1.mrna1;Target=FBgn0032216.1 307 689 +
ChrX	stalkie_big_nohaplotig	CDS	75483440	75483596	100	-	2	ID=FBgn0032216.1.mrna1.cds5;Name=FBgn0032216.1;Parent=FBgn0032216.1.mrna1;Target=FBgn0032216.1 690 846 +
ChrX	stalkie_big_nohaplotig	CDS	75478694	75478759	100	-	0	ID=FBgn0032216.1.mrna1.cds6;Name=FBgn0032216.1;Parent=FBgn0032216.1.mrna1;Target=FBgn0032216.1 847 912 +
ChrX	stalkie_big_nohaplotig	CDS	75478073	75478621	100	-	0	ID=FBgn0032216.1.mrna1.cds7;Name=FBgn0032216.1;Parent=FBgn0032216.1.mrna1;Target=FBgn0032216.1 913 1461 +
ChrX	stalkie_big_nohaplotig	mRNA	75402009	75409600	.	-	.	ID=FBgn0032748.1.mrna1;Name=FBgn0032748.1;Parent=FBgn0032748.1.path1;Dir=sensecoverage=60.0;identity=100.0;matches=1632;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	75408794	75409600	100	-	.	ID=FBgn0032748.1.mrna1.exon1;Name=FBgn0032748.1;Parent=FBgn0032748.1.mrna1;Target=FBgn0032748.1 1 807 +
ChrX	stalkie_big_nohaplotig	exon	75408450	75408611	100	-	.	ID=FBgn0032748.1.mrna1.exon2;Name=FBgn0032748.1;Parent=FBgn0032748.1.mrna1;Target=FBgn0032748.1 808 969 +
ChrX	stalkie_big_nohaplotig	exon	75408082	75408384	100	-	.	ID=FBgn0032748.1.mrna1.exon3;Name=FBgn0032748.1;Parent=FBgn0032748.1.mrna1;Target=FBgn0032748.1 970 1272 +
ChrX	stalkie_big_nohaplotig	exon	75402009	75402368	100	-	.	ID=FBgn0032748.1.mrna1.exon4;Name=FBgn0032748.1;Parent=FBgn0032748.1.mrna1;Target=FBgn0032748.1 1273 1632 +
ChrX	stalkie_big_nohaplotig	CDS	75408794	75409600	100	-	0	ID=FBgn0032748.1.mrna1.cds1;Name=FBgn0032748.1;Parent=FBgn0032748.1.mrna1;Target=FBgn0032748.1 1 807 +
ChrX	stalkie_big_nohaplotig	CDS	75408450	75408611	100	-	0	ID=FBgn0032748.1.mrna1.cds2;Name=FBgn0032748.1;Parent=FBgn0032748.1.mrna1;Target=FBgn0032748.1 808 969 +
ChrX	stalkie_big_nohaplotig	CDS	75408082	75408384	100	-	0	ID=FBgn0032748.1.mrna1.cds3;Name=FBgn0032748.1;Parent=FBgn0032748.1.mrna1;Target=FBgn0032748.1 970 1272 +
ChrX	stalkie_big_nohaplotig	CDS	75402009	75402368	100	-	0	ID=FBgn0032748.1.mrna1.cds4;Name=FBgn0032748.1;Parent=FBgn0032748.1.mrna1;Target=FBgn0032748.1 1273 1632 +
ChrX	stalkie_big_nohaplotig	mRNA	75449969	75457978	.	+	.	ID=FBgn0263198.1.mrna1;Name=FBgn0263198.1;Parent=FBgn0263198.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2543;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	75449969	75451505	100	+	.	ID=FBgn0263198.1.mrna1.exon1;Name=FBgn0263198.1;Parent=FBgn0263198.1.mrna1;Target=FBgn0263198.1 2 1538 +
ChrX	stalkie_big_nohaplotig	exon	75451585	75451795	100	+	.	ID=FBgn0263198.1.mrna1.exon2;Name=FBgn0263198.1;Parent=FBgn0263198.1.mrna1;Target=FBgn0263198.1 1539 1749 +
ChrX	stalkie_big_nohaplotig	exon	75455452	75455638	100	+	.	ID=FBgn0263198.1.mrna1.exon3;Name=FBgn0263198.1;Parent=FBgn0263198.1.mrna1;Target=FBgn0263198.1 1750 1936 +
ChrX	stalkie_big_nohaplotig	exon	75455688	75455800	100	+	.	ID=FBgn0263198.1.mrna1.exon4;Name=FBgn0263198.1;Parent=FBgn0263198.1.mrna1;Target=FBgn0263198.1 1937 2049 +
ChrX	stalkie_big_nohaplotig	exon	75457484	75457978	100	+	.	ID=FBgn0263198.1.mrna1.exon5;Name=FBgn0263198.1;Parent=FBgn0263198.1.mrna1;Target=FBgn0263198.1 2050 2544 +
ChrX	stalkie_big_nohaplotig	CDS	75449971	75451505	100	+	0	ID=FBgn0263198.1.mrna1.cds1;Name=FBgn0263198.1;Parent=FBgn0263198.1.mrna1;Target=FBgn0263198.1 4 1538 +
ChrX	stalkie_big_nohaplotig	CDS	75451585	75451795	100	+	2	ID=FBgn0263198.1.mrna1.cds2;Name=FBgn0263198.1;Parent=FBgn0263198.1.mrna1;Target=FBgn0263198.1 1539 1749 +
ChrX	stalkie_big_nohaplotig	CDS	75455452	75455638	100	+	0	ID=FBgn0263198.1.mrna1.cds3;Name=FBgn0263198.1;Parent=FBgn0263198.1.mrna1;Target=FBgn0263198.1 1750 1936 +
ChrX	stalkie_big_nohaplotig	CDS	75455688	75455800	100	+	1	ID=FBgn0263198.1.mrna1.cds4;Name=FBgn0263198.1;Parent=FBgn0263198.1.mrna1;Target=FBgn0263198.1 1937 2049 +
ChrX	stalkie_big_nohaplotig	CDS	75457484	75457978	100	+	0	ID=FBgn0263198.1.mrna1.cds5;Name=FBgn0263198.1;Parent=FBgn0263198.1.mrna1;Target=FBgn0263198.1 2050 2544 +
Chr2	stalkie_big_nohaplotig	mRNA	56632191	56724007	.	+	.	ID=FBgn0050011.1.mrna1;Name=FBgn0050011.1;Parent=FBgn0050011.1.path1;Dir=sensecoverage=91.0;identity=98.7;matches=2463;mismatches=11;indels=21;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	56632191	56632199	100	+	.	ID=FBgn0050011.1.mrna1.exon1;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 248 256 +
Chr2	stalkie_big_nohaplotig	exon	56649591	56649592	100	+	.	ID=FBgn0050011.1.mrna1.exon3;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 277 278 +
Chr2	stalkie_big_nohaplotig	exon	56654361	56654363	100	+	.	ID=FBgn0050011.1.mrna1.exon4;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 279 281 +
Chr2	stalkie_big_nohaplotig	exon	56655948	56655983	36	+	.	ID=FBgn0050011.1.mrna1.exon5;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 282 296 +
Chr2	stalkie_big_nohaplotig	exon	56662324	56662332	100	+	.	ID=FBgn0050011.1.mrna1.exon6;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 297 305 +
Chr2	stalkie_big_nohaplotig	exon	56666905	56666913	100	+	.	ID=FBgn0050011.1.mrna1.exon7;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 306 314 +
Chr2	stalkie_big_nohaplotig	exon	56667186	56667196	100	+	.	ID=FBgn0050011.1.mrna1.exon8;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 315 325 +
Chr2	stalkie_big_nohaplotig	exon	56668363	56668367	100	+	.	ID=FBgn0050011.1.mrna1.exon9;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 326 330 +
Chr2	stalkie_big_nohaplotig	exon	56673561	56673570	100	+	.	ID=FBgn0050011.1.mrna1.exon11;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 349 358 +
Chr2	stalkie_big_nohaplotig	exon	56681292	56681304	76	+	.	ID=FBgn0050011.1.mrna1.exon12;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 359 371 +
Chr2	stalkie_big_nohaplotig	exon	56685142	56685156	86	+	.	ID=FBgn0050011.1.mrna1.exon13;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 372 386 +
Chr2	stalkie_big_nohaplotig	exon	56691483	56691607	99	+	.	ID=FBgn0050011.1.mrna1.exon14;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 387 511 +
Chr2	stalkie_big_nohaplotig	exon	56691666	56691872	100	+	.	ID=FBgn0050011.1.mrna1.exon15;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 512 718 +
Chr2	stalkie_big_nohaplotig	exon	56711632	56711704	100	+	.	ID=FBgn0050011.1.mrna1.exon16;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 719 791 +
Chr2	stalkie_big_nohaplotig	exon	56711787	56712106	100	+	.	ID=FBgn0050011.1.mrna1.exon17;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 792 1111 +
Chr2	stalkie_big_nohaplotig	exon	56712243	56712336	100	+	.	ID=FBgn0050011.1.mrna1.exon18;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 1112 1205 +
Chr2	stalkie_big_nohaplotig	exon	56712398	56712542	100	+	.	ID=FBgn0050011.1.mrna1.exon19;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 1206 1350 +
Chr2	stalkie_big_nohaplotig	exon	56715095	56715559	99	+	.	ID=FBgn0050011.1.mrna1.exon20;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 1351 1815 +
Chr2	stalkie_big_nohaplotig	exon	56715621	56715790	100	+	.	ID=FBgn0050011.1.mrna1.exon21;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 1816 1985 +
Chr2	stalkie_big_nohaplotig	exon	56721037	56721226	100	+	.	ID=FBgn0050011.1.mrna1.exon22;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 1986 2175 +
Chr2	stalkie_big_nohaplotig	exon	56721440	56721555	100	+	.	ID=FBgn0050011.1.mrna1.exon23;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 2176 2291 +
Chr2	stalkie_big_nohaplotig	exon	56722596	56722670	100	+	.	ID=FBgn0050011.1.mrna1.exon24;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 2292 2366 +
Chr2	stalkie_big_nohaplotig	exon	56723617	56724007	99	+	.	ID=FBgn0050011.1.mrna1.exon25;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 2367 2757 +
Chr2	stalkie_big_nohaplotig	CDS	56691749	56691872	100	+	0	ID=FBgn0050011.1.mrna1.cds1;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 595 718 +
Chr2	stalkie_big_nohaplotig	CDS	56711632	56711704	100	+	1	ID=FBgn0050011.1.mrna1.cds2;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 719 791 +
Chr2	stalkie_big_nohaplotig	CDS	56711787	56712106	100	+	2	ID=FBgn0050011.1.mrna1.cds3;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 792 1111 +
Chr2	stalkie_big_nohaplotig	CDS	56712243	56712336	100	+	1	ID=FBgn0050011.1.mrna1.cds4;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 1112 1205 +
Chr2	stalkie_big_nohaplotig	CDS	56712398	56712542	100	+	2	ID=FBgn0050011.1.mrna1.cds5;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 1206 1350 +
Chr2	stalkie_big_nohaplotig	CDS	56715095	56715559	99	+	0	ID=FBgn0050011.1.mrna1.cds6;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 1351 1815 +
Chr2	stalkie_big_nohaplotig	CDS	56715621	56715790	100	+	0	ID=FBgn0050011.1.mrna1.cds7;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 1816 1985 +
Chr2	stalkie_big_nohaplotig	CDS	56721037	56721226	100	+	2	ID=FBgn0050011.1.mrna1.cds8;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 1986 2175 +
Chr2	stalkie_big_nohaplotig	CDS	56721440	56721555	100	+	0	ID=FBgn0050011.1.mrna1.cds9;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 2176 2291 +
Chr2	stalkie_big_nohaplotig	CDS	56722596	56722670	100	+	2	ID=FBgn0050011.1.mrna1.cds10;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 2292 2366 +
Chr2	stalkie_big_nohaplotig	CDS	56723617	56724007	99	+	2	ID=FBgn0050011.1.mrna1.cds11;Name=FBgn0050011.1;Parent=FBgn0050011.1.mrna1;Target=FBgn0050011.1 2367 2757 +
Chr1	stalkie_big_nohaplotig	mRNA	105207303	105208336	.	-	.	ID=FBgn0030431.1.mrna1;Name=FBgn0030431.1;Parent=FBgn0030431.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=780;mismatches=0;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	105208190	105208336	100	-	.	ID=FBgn0030431.1.mrna1.exon1;Name=FBgn0030431.1;Parent=FBgn0030431.1.mrna1;Target=FBgn0030431.1 1 147 +
Chr1	stalkie_big_nohaplotig	exon	105207650	105207997	100	-	.	ID=FBgn0030431.1.mrna1.exon2;Name=FBgn0030431.1;Parent=FBgn0030431.1.mrna1;Target=FBgn0030431.1 148 495 +
Chr1	stalkie_big_nohaplotig	exon	105207303	105207587	100	-	.	ID=FBgn0030431.1.mrna1.exon3;Name=FBgn0030431.1;Parent=FBgn0030431.1.mrna1;Target=FBgn0030431.1 496 780 +
Chr1	stalkie_big_nohaplotig	CDS	105208190	105208336	100	-	0	ID=FBgn0030431.1.mrna1.cds1;Name=FBgn0030431.1;Parent=FBgn0030431.1.mrna1;Target=FBgn0030431.1 1 147 +
Chr1	stalkie_big_nohaplotig	CDS	105207650	105207997	100	-	0	ID=FBgn0030431.1.mrna1.cds2;Name=FBgn0030431.1;Parent=FBgn0030431.1.mrna1;Target=FBgn0030431.1 148 495 +
Chr1	stalkie_big_nohaplotig	CDS	105207303	105207587	100	-	0	ID=FBgn0030431.1.mrna1.cds3;Name=FBgn0030431.1;Parent=FBgn0030431.1.mrna1;Target=FBgn0030431.1 496 780 +
ChrX	stalkie_big_nohaplotig	mRNA	35678632	35721479	.	+	.	ID=FBgn0031294.1.mrna1;Name=FBgn0031294.1;Parent=FBgn0031294.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=3637;mismatches=5;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	35678632	35678653	100	+	.	ID=FBgn0031294.1.mrna1.exon1;Name=FBgn0031294.1;Parent=FBgn0031294.1.mrna1;Target=FBgn0031294.1 1 22 +
ChrX	stalkie_big_nohaplotig	exon	35681520	35681849	100	+	.	ID=FBgn0031294.1.mrna1.exon2;Name=FBgn0031294.1;Parent=FBgn0031294.1.mrna1;Target=FBgn0031294.1 23 352 +
ChrX	stalkie_big_nohaplotig	exon	35714056	35714109	100	+	.	ID=FBgn0031294.1.mrna1.exon3;Name=FBgn0031294.1;Parent=FBgn0031294.1.mrna1;Target=FBgn0031294.1 353 406 +
ChrX	stalkie_big_nohaplotig	exon	35716897	35716954	100	+	.	ID=FBgn0031294.1.mrna1.exon4;Name=FBgn0031294.1;Parent=FBgn0031294.1.mrna1;Target=FBgn0031294.1 407 464 +
ChrX	stalkie_big_nohaplotig	exon	35717022	35718443	99	+	.	ID=FBgn0031294.1.mrna1.exon5;Name=FBgn0031294.1;Parent=FBgn0031294.1.mrna1;Target=FBgn0031294.1 465 1886 +
ChrX	stalkie_big_nohaplotig	exon	35718503	35718586	100	+	.	ID=FBgn0031294.1.mrna1.exon6;Name=FBgn0031294.1;Parent=FBgn0031294.1.mrna1;Target=FBgn0031294.1 1887 1970 +
ChrX	stalkie_big_nohaplotig	exon	35718927	35719497	100	+	.	ID=FBgn0031294.1.mrna1.exon7;Name=FBgn0031294.1;Parent=FBgn0031294.1.mrna1;Target=FBgn0031294.1 1971 2541 +
ChrX	stalkie_big_nohaplotig	exon	35719578	35719799	100	+	.	ID=FBgn0031294.1.mrna1.exon8;Name=FBgn0031294.1;Parent=FBgn0031294.1.mrna1;Target=FBgn0031294.1 2542 2763 +
ChrX	stalkie_big_nohaplotig	exon	35719871	35720068	100	+	.	ID=FBgn0031294.1.mrna1.exon9;Name=FBgn0031294.1;Parent=FBgn0031294.1.mrna1;Target=FBgn0031294.1 2764 2961 +
ChrX	stalkie_big_nohaplotig	exon	35720723	35720889	98	+	.	ID=FBgn0031294.1.mrna1.exon10;Name=FBgn0031294.1;Parent=FBgn0031294.1.mrna1;Target=FBgn0031294.1 2962 3128 +
ChrX	stalkie_big_nohaplotig	exon	35720966	35721479	100	+	.	ID=FBgn0031294.1.mrna1.exon11;Name=FBgn0031294.1;Parent=FBgn0031294.1.mrna1;Target=FBgn0031294.1 3129 3642 +
ChrX	stalkie_big_nohaplotig	CDS	35678632	35678653	100	+	0	ID=FBgn0031294.1.mrna1.cds1;Name=FBgn0031294.1;Parent=FBgn0031294.1.mrna1;Target=FBgn0031294.1 1 22 +
ChrX	stalkie_big_nohaplotig	CDS	35681520	35681849	100	+	1	ID=FBgn0031294.1.mrna1.cds2;Name=FBgn0031294.1;Parent=FBgn0031294.1.mrna1;Target=FBgn0031294.1 23 352 +
ChrX	stalkie_big_nohaplotig	CDS	35714056	35714109	100	+	1	ID=FBgn0031294.1.mrna1.cds3;Name=FBgn0031294.1;Parent=FBgn0031294.1.mrna1;Target=FBgn0031294.1 353 406 +
ChrX	stalkie_big_nohaplotig	CDS	35716897	35716954	100	+	1	ID=FBgn0031294.1.mrna1.cds4;Name=FBgn0031294.1;Parent=FBgn0031294.1.mrna1;Target=FBgn0031294.1 407 464 +
ChrX	stalkie_big_nohaplotig	CDS	35717022	35718443	99	+	2	ID=FBgn0031294.1.mrna1.cds5;Name=FBgn0031294.1;Parent=FBgn0031294.1.mrna1;Target=FBgn0031294.1 465 1886 +
ChrX	stalkie_big_nohaplotig	CDS	35718503	35718586	100	+	2	ID=FBgn0031294.1.mrna1.cds6;Name=FBgn0031294.1;Parent=FBgn0031294.1.mrna1;Target=FBgn0031294.1 1887 1970 +
ChrX	stalkie_big_nohaplotig	CDS	35718927	35719497	100	+	2	ID=FBgn0031294.1.mrna1.cds7;Name=FBgn0031294.1;Parent=FBgn0031294.1.mrna1;Target=FBgn0031294.1 1971 2541 +
ChrX	stalkie_big_nohaplotig	CDS	35719578	35719799	100	+	0	ID=FBgn0031294.1.mrna1.cds8;Name=FBgn0031294.1;Parent=FBgn0031294.1.mrna1;Target=FBgn0031294.1 2542 2763 +
ChrX	stalkie_big_nohaplotig	CDS	35719871	35720068	100	+	0	ID=FBgn0031294.1.mrna1.cds9;Name=FBgn0031294.1;Parent=FBgn0031294.1.mrna1;Target=FBgn0031294.1 2764 2961 +
ChrX	stalkie_big_nohaplotig	CDS	35720723	35720889	98	+	0	ID=FBgn0031294.1.mrna1.cds10;Name=FBgn0031294.1;Parent=FBgn0031294.1.mrna1;Target=FBgn0031294.1 2962 3128 +
ChrX	stalkie_big_nohaplotig	CDS	35720966	35721479	100	+	2	ID=FBgn0031294.1.mrna1.cds11;Name=FBgn0031294.1;Parent=FBgn0031294.1.mrna1;Target=FBgn0031294.1 3129 3642 +
Chr1	stalkie_big_nohaplotig	mRNA	137297747	137298406	.	-	.	ID=FBgn0030029.1.mrna1;Name=FBgn0030029.1;Parent=FBgn0030029.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=544;mismatches=2;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	137298384	137298406	100	-	.	ID=FBgn0030029.1.mrna1.exon1;Name=FBgn0030029.1;Parent=FBgn0030029.1.mrna1;Target=FBgn0030029.1 1 23 +
Chr1	stalkie_big_nohaplotig	exon	137297943	137298332	99	-	.	ID=FBgn0030029.1.mrna1.exon2;Name=FBgn0030029.1;Parent=FBgn0030029.1.mrna1;Target=FBgn0030029.1 24 413 +
Chr1	stalkie_big_nohaplotig	exon	137297747	137297879	100	-	.	ID=FBgn0030029.1.mrna1.exon3;Name=FBgn0030029.1;Parent=FBgn0030029.1.mrna1;Target=FBgn0030029.1 414 546 +
Chr1	stalkie_big_nohaplotig	CDS	137298384	137298406	100	-	0	ID=FBgn0030029.1.mrna1.cds1;Name=FBgn0030029.1;Parent=FBgn0030029.1.mrna1;Target=FBgn0030029.1 1 23 +
Chr1	stalkie_big_nohaplotig	CDS	137297943	137298332	99	-	2	ID=FBgn0030029.1.mrna1.cds2;Name=FBgn0030029.1;Parent=FBgn0030029.1.mrna1;Target=FBgn0030029.1 24 413 +
Chr1	stalkie_big_nohaplotig	CDS	137297747	137297879	100	-	2	ID=FBgn0030029.1.mrna1.cds3;Name=FBgn0030029.1;Parent=FBgn0030029.1.mrna1;Target=FBgn0030029.1 414 546 +
ChrX	stalkie_big_nohaplotig	mRNA	22029348	22031075	.	+	.	ID=FBgn0001983.1.mrna1;Name=FBgn0001983.1;Parent=FBgn0001983.1.path1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=1719;mismatches=9;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	22029348	22031075	99	+	.	ID=FBgn0001983.1.mrna1.exon1;Name=FBgn0001983.1;Parent=FBgn0001983.1.mrna1;Target=FBgn0001983.1 1728 1 .
ChrX	stalkie_big_nohaplotig	CDS	22029348	22031075	99	+	0	ID=FBgn0001983.1.mrna1.cds1;Name=FBgn0001983.1;Parent=FBgn0001983.1.mrna1;Target=FBgn0001983.1 1728 1 .
ChrX	stalkie_big_nohaplotig	mRNA	49422209	49426841	.	-	.	ID=FBgn0001978.1.mrna1;Name=FBgn0001978.1;Parent=FBgn0001978.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3332;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	49426521	49426841	99	-	.	ID=FBgn0001978.1.mrna1.exon1;Name=FBgn0001978.1;Parent=FBgn0001978.1.mrna1;Target=FBgn0001978.1 1 321 +
ChrX	stalkie_big_nohaplotig	exon	49425682	49426446	100	-	.	ID=FBgn0001978.1.mrna1.exon2;Name=FBgn0001978.1;Parent=FBgn0001978.1.mrna1;Target=FBgn0001978.1 322 1086 +
ChrX	stalkie_big_nohaplotig	exon	49423836	49424709	100	-	.	ID=FBgn0001978.1.mrna1.exon3;Name=FBgn0001978.1;Parent=FBgn0001978.1.mrna1;Target=FBgn0001978.1 1087 1960 +
ChrX	stalkie_big_nohaplotig	exon	49423024	49423772	100	-	.	ID=FBgn0001978.1.mrna1.exon4;Name=FBgn0001978.1;Parent=FBgn0001978.1.mrna1;Target=FBgn0001978.1 1961 2709 +
ChrX	stalkie_big_nohaplotig	exon	49422791	49422963	100	-	.	ID=FBgn0001978.1.mrna1.exon5;Name=FBgn0001978.1;Parent=FBgn0001978.1.mrna1;Target=FBgn0001978.1 2710 2882 +
ChrX	stalkie_big_nohaplotig	exon	49422369	49422720	100	-	.	ID=FBgn0001978.1.mrna1.exon6;Name=FBgn0001978.1;Parent=FBgn0001978.1.mrna1;Target=FBgn0001978.1 2883 3234 +
ChrX	stalkie_big_nohaplotig	exon	49422209	49422307	100	-	.	ID=FBgn0001978.1.mrna1.exon7;Name=FBgn0001978.1;Parent=FBgn0001978.1.mrna1;Target=FBgn0001978.1 3235 3333 +
ChrX	stalkie_big_nohaplotig	CDS	49426521	49426841	99	-	0	ID=FBgn0001978.1.mrna1.cds1;Name=FBgn0001978.1;Parent=FBgn0001978.1.mrna1;Target=FBgn0001978.1 1 321 +
ChrX	stalkie_big_nohaplotig	CDS	49425682	49426446	100	-	0	ID=FBgn0001978.1.mrna1.cds2;Name=FBgn0001978.1;Parent=FBgn0001978.1.mrna1;Target=FBgn0001978.1 322 1086 +
ChrX	stalkie_big_nohaplotig	CDS	49423836	49424709	100	-	0	ID=FBgn0001978.1.mrna1.cds3;Name=FBgn0001978.1;Parent=FBgn0001978.1.mrna1;Target=FBgn0001978.1 1087 1960 +
ChrX	stalkie_big_nohaplotig	CDS	49423024	49423772	100	-	1	ID=FBgn0001978.1.mrna1.cds4;Name=FBgn0001978.1;Parent=FBgn0001978.1.mrna1;Target=FBgn0001978.1 1961 2709 +
ChrX	stalkie_big_nohaplotig	CDS	49422791	49422963	100	-	0	ID=FBgn0001978.1.mrna1.cds5;Name=FBgn0001978.1;Parent=FBgn0001978.1.mrna1;Target=FBgn0001978.1 2710 2882 +
ChrX	stalkie_big_nohaplotig	CDS	49422369	49422720	100	-	2	ID=FBgn0001978.1.mrna1.cds6;Name=FBgn0001978.1;Parent=FBgn0001978.1.mrna1;Target=FBgn0001978.1 2883 3234 +
ChrX	stalkie_big_nohaplotig	CDS	49422209	49422307	100	-	0	ID=FBgn0001978.1.mrna1.cds7;Name=FBgn0001978.1;Parent=FBgn0001978.1.mrna1;Target=FBgn0001978.1 3235 3333 +
ChrX	stalkie_big_nohaplotig	mRNA	49531632	49536317	.	-	.	ID=FBgn0028420.1.mrna2;Name=FBgn0028420.1;Parent=FBgn0028420.1.path2;Dir=sensecoverage=91.3;identity=100.0;matches=2267;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	49535866	49536317	100	-	.	ID=FBgn0028420.1.mrna2.exon1;Name=FBgn0028420.1;Parent=FBgn0028420.1.mrna2;Target=FBgn0028420.1 218 669 +
ChrX	stalkie_big_nohaplotig	exon	49534231	49535675	100	-	.	ID=FBgn0028420.1.mrna2.exon2;Name=FBgn0028420.1;Parent=FBgn0028420.1.mrna2;Target=FBgn0028420.1 670 2114 +
ChrX	stalkie_big_nohaplotig	exon	49531632	49532001	100	-	.	ID=FBgn0028420.1.mrna2.exon3;Name=FBgn0028420.1;Parent=FBgn0028420.1.mrna2;Target=FBgn0028420.1 2115 2484 +
ChrX	stalkie_big_nohaplotig	CDS	49535866	49536317	100	-	1	ID=FBgn0028420.1.mrna2.cds1;Name=FBgn0028420.1;Parent=FBgn0028420.1.mrna2;Target=FBgn0028420.1 218 669 +
ChrX	stalkie_big_nohaplotig	CDS	49534231	49535675	100	-	0	ID=FBgn0028420.1.mrna2.cds2;Name=FBgn0028420.1;Parent=FBgn0028420.1.mrna2;Target=FBgn0028420.1 670 2114 +
ChrX	stalkie_big_nohaplotig	CDS	49531632	49532001	100	-	2	ID=FBgn0028420.1.mrna2.cds3;Name=FBgn0028420.1;Parent=FBgn0028420.1.mrna2;Target=FBgn0028420.1 2115 2484 +
ChrX	stalkie_big_nohaplotig	mRNA	49383675	49390608	.	+	.	ID=FBgn0031855.1.mrna1;Name=FBgn0031855.1;Parent=FBgn0031855.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1428;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	49383675	49383756	100	+	.	ID=FBgn0031855.1.mrna1.exon1;Name=FBgn0031855.1;Parent=FBgn0031855.1.mrna1;Target=FBgn0031855.1 1 82 +
ChrX	stalkie_big_nohaplotig	exon	49389263	49390608	100	+	.	ID=FBgn0031855.1.mrna1.exon2;Name=FBgn0031855.1;Parent=FBgn0031855.1.mrna1;Target=FBgn0031855.1 83 1428 +
ChrX	stalkie_big_nohaplotig	CDS	49383675	49383756	100	+	0	ID=FBgn0031855.1.mrna1.cds1;Name=FBgn0031855.1;Parent=FBgn0031855.1.mrna1;Target=FBgn0031855.1 1 82 +
ChrX	stalkie_big_nohaplotig	CDS	49389263	49390608	100	+	1	ID=FBgn0031855.1.mrna1.cds2;Name=FBgn0031855.1;Parent=FBgn0031855.1.mrna1;Target=FBgn0031855.1 83 1428 +
ChrX	stalkie_big_nohaplotig	mRNA	49520069	49521661	.	+	.	ID=FBgn0085787.1.mrna1;Name=FBgn0085787.1;Parent=FBgn0085787.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1278;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	49520069	49520696	100	+	.	ID=FBgn0085787.1.mrna1.exon1;Name=FBgn0085787.1;Parent=FBgn0085787.1.mrna1;Target=FBgn0085787.1 1 628 +
ChrX	stalkie_big_nohaplotig	exon	49520939	49521193	100	+	.	ID=FBgn0085787.1.mrna1.exon2;Name=FBgn0085787.1;Parent=FBgn0085787.1.mrna1;Target=FBgn0085787.1 629 883 +
ChrX	stalkie_big_nohaplotig	exon	49521267	49521661	100	+	.	ID=FBgn0085787.1.mrna1.exon3;Name=FBgn0085787.1;Parent=FBgn0085787.1.mrna1;Target=FBgn0085787.1 884 1278 +
ChrX	stalkie_big_nohaplotig	CDS	49520069	49520696	100	+	0	ID=FBgn0085787.1.mrna1.cds1;Name=FBgn0085787.1;Parent=FBgn0085787.1.mrna1;Target=FBgn0085787.1 1 628 +
ChrX	stalkie_big_nohaplotig	CDS	49520939	49521193	100	+	1	ID=FBgn0085787.1.mrna1.cds2;Name=FBgn0085787.1;Parent=FBgn0085787.1.mrna1;Target=FBgn0085787.1 629 883 +
ChrX	stalkie_big_nohaplotig	CDS	49521267	49521661	100	+	1	ID=FBgn0085787.1.mrna1.cds3;Name=FBgn0085787.1;Parent=FBgn0085787.1.mrna1;Target=FBgn0085787.1 884 1278 +
ChrX	stalkie_big_nohaplotig	mRNA	49397262	49412076	.	-	.	ID=FBgn0259984.1.mrna1;Name=FBgn0259984.1;Parent=FBgn0259984.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3066;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	49411971	49412076	100	-	.	ID=FBgn0259984.1.mrna1.exon1;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 1 106 +
ChrX	stalkie_big_nohaplotig	exon	49408923	49408955	100	-	.	ID=FBgn0259984.1.mrna1.exon2;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 107 139 +
ChrX	stalkie_big_nohaplotig	exon	49405228	49405424	100	-	.	ID=FBgn0259984.1.mrna1.exon3;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 140 336 +
ChrX	stalkie_big_nohaplotig	exon	49404768	49405167	100	-	.	ID=FBgn0259984.1.mrna1.exon4;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 337 736 +
ChrX	stalkie_big_nohaplotig	exon	49404531	49404706	100	-	.	ID=FBgn0259984.1.mrna1.exon5;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 737 912 +
ChrX	stalkie_big_nohaplotig	exon	49404197	49404451	100	-	.	ID=FBgn0259984.1.mrna1.exon6;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 913 1167 +
ChrX	stalkie_big_nohaplotig	exon	49403970	49404116	100	-	.	ID=FBgn0259984.1.mrna1.exon7;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 1168 1314 +
ChrX	stalkie_big_nohaplotig	exon	49403542	49403702	100	-	.	ID=FBgn0259984.1.mrna1.exon8;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 1315 1475 +
ChrX	stalkie_big_nohaplotig	exon	49403251	49403485	100	-	.	ID=FBgn0259984.1.mrna1.exon9;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 1476 1710 +
ChrX	stalkie_big_nohaplotig	exon	49402151	49403197	100	-	.	ID=FBgn0259984.1.mrna1.exon10;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 1711 2757 +
ChrX	stalkie_big_nohaplotig	exon	49401786	49402069	100	-	.	ID=FBgn0259984.1.mrna1.exon11;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 2758 3041 +
ChrX	stalkie_big_nohaplotig	exon	49397262	49397286	100	-	.	ID=FBgn0259984.1.mrna1.exon12;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 3042 3066 +
ChrX	stalkie_big_nohaplotig	CDS	49411971	49412076	100	-	0	ID=FBgn0259984.1.mrna1.cds1;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 1 106 +
ChrX	stalkie_big_nohaplotig	CDS	49408923	49408955	100	-	1	ID=FBgn0259984.1.mrna1.cds2;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 107 139 +
ChrX	stalkie_big_nohaplotig	CDS	49405228	49405424	100	-	1	ID=FBgn0259984.1.mrna1.cds3;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 140 336 +
ChrX	stalkie_big_nohaplotig	CDS	49404768	49405167	100	-	0	ID=FBgn0259984.1.mrna1.cds4;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 337 736 +
ChrX	stalkie_big_nohaplotig	CDS	49404531	49404706	100	-	1	ID=FBgn0259984.1.mrna1.cds5;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 737 912 +
ChrX	stalkie_big_nohaplotig	CDS	49404197	49404451	100	-	0	ID=FBgn0259984.1.mrna1.cds6;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 913 1167 +
ChrX	stalkie_big_nohaplotig	CDS	49403970	49404116	100	-	0	ID=FBgn0259984.1.mrna1.cds7;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 1168 1314 +
ChrX	stalkie_big_nohaplotig	CDS	49403542	49403702	100	-	0	ID=FBgn0259984.1.mrna1.cds8;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 1315 1475 +
ChrX	stalkie_big_nohaplotig	CDS	49403251	49403485	100	-	2	ID=FBgn0259984.1.mrna1.cds9;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 1476 1710 +
ChrX	stalkie_big_nohaplotig	CDS	49402151	49403197	100	-	0	ID=FBgn0259984.1.mrna1.cds10;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 1711 2757 +
ChrX	stalkie_big_nohaplotig	CDS	49401786	49402069	100	-	0	ID=FBgn0259984.1.mrna1.cds11;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 2758 3041 +
ChrX	stalkie_big_nohaplotig	CDS	49397262	49397286	100	-	2	ID=FBgn0259984.1.mrna1.cds12;Name=FBgn0259984.1;Parent=FBgn0259984.1.mrna1;Target=FBgn0259984.1 3042 3066 +
Chr1	stalkie_big_nohaplotig	mRNA	48675280	48676105	.	-	.	ID=ORF2631.mrna1;Name=ORF2631;Parent=ORF2631.path1;Dir=sensecoverage=100.0;identity=91.2;matches=758;mismatches=7;indels=66;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	48676078	48676105	100	-	.	ID=ORF2631.mrna1.exon1;Name=ORF2631;Parent=ORF2631.mrna1;Target=ORF2631 1 28 +
Chr1	stalkie_big_nohaplotig	exon	48675280	48676016	90	-	.	ID=ORF2631.mrna1.exon2;Name=ORF2631;Parent=ORF2631.mrna1;Target=ORF2631 29 831 +
Chr1	stalkie_big_nohaplotig	CDS	48676078	48676105	100	-	0	ID=ORF2631.mrna1.cds1;Name=ORF2631;Parent=ORF2631.mrna1;Target=ORF2631 1 28 +
Chr1	stalkie_big_nohaplotig	CDS	48675280	48676016	90	-	1	ID=ORF2631.mrna1.cds2;Name=ORF2631;Parent=ORF2631.mrna1;Target=ORF2631 29 831 +
Chr1	stalkie_big_nohaplotig	mRNA	48875092	48881563	.	-	.	ID=FBgn0036493.mrna1;Name=FBgn0036493;Parent=FBgn0036493.path1;Dir=sensecoverage=100.0;identity=99.5;matches=884;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	48881344	48881563	99	-	.	ID=FBgn0036493.mrna1.exon1;Name=FBgn0036493;Parent=FBgn0036493.mrna1;Target=FBgn0036493 1 220 +
Chr1	stalkie_big_nohaplotig	exon	48881175	48881277	98	-	.	ID=FBgn0036493.mrna1.exon2;Name=FBgn0036493;Parent=FBgn0036493.mrna1;Target=FBgn0036493 221 323 +
Chr1	stalkie_big_nohaplotig	exon	48880020	48880210	99	-	.	ID=FBgn0036493.mrna1.exon3;Name=FBgn0036493;Parent=FBgn0036493.mrna1;Target=FBgn0036493 324 514 +
Chr1	stalkie_big_nohaplotig	exon	48878961	48879236	100	-	.	ID=FBgn0036493.mrna1.exon4;Name=FBgn0036493;Parent=FBgn0036493.mrna1;Target=FBgn0036493 515 790 +
Chr1	stalkie_big_nohaplotig	exon	48875092	48875189	100	-	.	ID=FBgn0036493.mrna1.exon5;Name=FBgn0036493;Parent=FBgn0036493.mrna1;Target=FBgn0036493 791 888 +
Chr1	stalkie_big_nohaplotig	CDS	48881344	48881563	99	-	0	ID=FBgn0036493.mrna1.cds1;Name=FBgn0036493;Parent=FBgn0036493.mrna1;Target=FBgn0036493 1 220 +
Chr1	stalkie_big_nohaplotig	CDS	48881175	48881277	98	-	1	ID=FBgn0036493.mrna1.cds2;Name=FBgn0036493;Parent=FBgn0036493.mrna1;Target=FBgn0036493 221 323 +
Chr1	stalkie_big_nohaplotig	CDS	48880020	48880210	99	-	2	ID=FBgn0036493.mrna1.cds3;Name=FBgn0036493;Parent=FBgn0036493.mrna1;Target=FBgn0036493 324 514 +
Chr1	stalkie_big_nohaplotig	CDS	48878961	48879236	100	-	1	ID=FBgn0036493.mrna1.cds4;Name=FBgn0036493;Parent=FBgn0036493.mrna1;Target=FBgn0036493 515 790 +
Chr1	stalkie_big_nohaplotig	CDS	48875092	48875189	100	-	1	ID=FBgn0036493.mrna1.cds5;Name=FBgn0036493;Parent=FBgn0036493.mrna1;Target=FBgn0036493 791 888 +
Chr1	stalkie_big_nohaplotig	mRNA	131193975	131235034	.	+	.	ID=FBgn0262738.1.mrna1;Name=FBgn0262738.1;Parent=FBgn0262738.1.path1;Dir=sensecoverage=98.0;identity=99.7;matches=3213;mismatches=9;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	131193975	131194169	100	+	.	ID=FBgn0262738.1.mrna1.exon1;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 1 195 +
Chr1	stalkie_big_nohaplotig	exon	131194438	131194497	100	+	.	ID=FBgn0262738.1.mrna1.exon2;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 196 255 +
Chr1	stalkie_big_nohaplotig	exon	131204624	131204770	100	+	.	ID=FBgn0262738.1.mrna1.exon3;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 256 402 +
Chr1	stalkie_big_nohaplotig	exon	131217942	131218021	100	+	.	ID=FBgn0262738.1.mrna1.exon4;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 403 482 +
Chr1	stalkie_big_nohaplotig	exon	131230963	131231199	99	+	.	ID=FBgn0262738.1.mrna1.exon5;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 483 719 +
Chr1	stalkie_big_nohaplotig	exon	131231268	131231434	99	+	.	ID=FBgn0262738.1.mrna1.exon6;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 720 886 +
Chr1	stalkie_big_nohaplotig	exon	131232231	131232441	100	+	.	ID=FBgn0262738.1.mrna1.exon7;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 887 1097 +
Chr1	stalkie_big_nohaplotig	exon	131232505	131232598	100	+	.	ID=FBgn0262738.1.mrna1.exon8;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 1098 1191 +
Chr1	stalkie_big_nohaplotig	exon	131232662	131232826	100	+	.	ID=FBgn0262738.1.mrna1.exon9;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 1192 1356 +
Chr1	stalkie_big_nohaplotig	exon	131232892	131233246	99	+	.	ID=FBgn0262738.1.mrna1.exon10;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 1357 1711 +
Chr1	stalkie_big_nohaplotig	exon	131233303	131234362	99	+	.	ID=FBgn0262738.1.mrna1.exon11;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 1712 2771 +
Chr1	stalkie_big_nohaplotig	exon	131234437	131234640	99	+	.	ID=FBgn0262738.1.mrna1.exon12;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 2772 2975 +
Chr1	stalkie_big_nohaplotig	exon	131234709	131234865	99	+	.	ID=FBgn0262738.1.mrna1.exon13;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 2976 3132 +
Chr1	stalkie_big_nohaplotig	exon	131234945	131235034	100	+	.	ID=FBgn0262738.1.mrna1.exon14;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 3133 3222 +
Chr1	stalkie_big_nohaplotig	CDS	131193975	131194169	100	+	0	ID=FBgn0262738.1.mrna1.cds1;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 1 195 +
Chr1	stalkie_big_nohaplotig	CDS	131194438	131194497	100	+	0	ID=FBgn0262738.1.mrna1.cds2;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 196 255 +
Chr1	stalkie_big_nohaplotig	CDS	131204624	131204770	100	+	0	ID=FBgn0262738.1.mrna1.cds3;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 256 402 +
Chr1	stalkie_big_nohaplotig	CDS	131217942	131218021	100	+	0	ID=FBgn0262738.1.mrna1.cds4;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 403 482 +
Chr1	stalkie_big_nohaplotig	CDS	131230963	131231199	99	+	2	ID=FBgn0262738.1.mrna1.cds5;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 483 719 +
Chr1	stalkie_big_nohaplotig	CDS	131231268	131231434	99	+	2	ID=FBgn0262738.1.mrna1.cds6;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 720 886 +
Chr1	stalkie_big_nohaplotig	CDS	131232231	131232441	100	+	1	ID=FBgn0262738.1.mrna1.cds7;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 887 1097 +
Chr1	stalkie_big_nohaplotig	CDS	131232505	131232598	100	+	2	ID=FBgn0262738.1.mrna1.cds8;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 1098 1191 +
Chr1	stalkie_big_nohaplotig	CDS	131232662	131232826	100	+	0	ID=FBgn0262738.1.mrna1.cds9;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 1192 1356 +
Chr1	stalkie_big_nohaplotig	CDS	131232892	131233246	99	+	0	ID=FBgn0262738.1.mrna1.cds10;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 1357 1711 +
Chr1	stalkie_big_nohaplotig	CDS	131233303	131234362	99	+	1	ID=FBgn0262738.1.mrna1.cds11;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 1712 2771 +
Chr1	stalkie_big_nohaplotig	CDS	131234437	131234640	99	+	2	ID=FBgn0262738.1.mrna1.cds12;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 2772 2975 +
Chr1	stalkie_big_nohaplotig	CDS	131234709	131234865	99	+	2	ID=FBgn0262738.1.mrna1.cds13;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 2976 3132 +
Chr1	stalkie_big_nohaplotig	CDS	131234945	131235034	100	+	0	ID=FBgn0262738.1.mrna1.cds14;Name=FBgn0262738.1;Parent=FBgn0262738.1.mrna1;Target=FBgn0262738.1 3133 3222 +
Chr1	stalkie_big_nohaplotig	mRNA	131172384	131173499	.	-	.	ID=ORF1399.mrna1;Name=ORF1399;Parent=ORF1399.path1;Dir=indeterminatecoverage=100.0;identity=99.6;matches=1112;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	131172384	131173499	99	-	.	ID=ORF1399.mrna1.exon1;Name=ORF1399;Parent=ORF1399.mrna1;Target=ORF1399 1116 1 .
Chr1	stalkie_big_nohaplotig	CDS	131172384	131173499	99	-	0	ID=ORF1399.mrna1.cds1;Name=ORF1399;Parent=ORF1399.mrna1;Target=ORF1399 1116 1 .
ChrX	stalkie_big_nohaplotig	mRNA	2160379	2165302	.	+	.	ID=FBgn0031395.1.mrna1;Name=FBgn0031395.1;Parent=FBgn0031395.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=687;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	2160379	2160570	100	+	.	ID=FBgn0031395.1.mrna1.exon1;Name=FBgn0031395.1;Parent=FBgn0031395.1.mrna1;Target=FBgn0031395.1 1 192 +
ChrX	stalkie_big_nohaplotig	exon	2160653	2160848	100	+	.	ID=FBgn0031395.1.mrna1.exon2;Name=FBgn0031395.1;Parent=FBgn0031395.1.mrna1;Target=FBgn0031395.1 193 388 +
ChrX	stalkie_big_nohaplotig	exon	2164923	2165003	100	+	.	ID=FBgn0031395.1.mrna1.exon3;Name=FBgn0031395.1;Parent=FBgn0031395.1.mrna1;Target=FBgn0031395.1 389 469 +
ChrX	stalkie_big_nohaplotig	exon	2165085	2165302	100	+	.	ID=FBgn0031395.1.mrna1.exon4;Name=FBgn0031395.1;Parent=FBgn0031395.1.mrna1;Target=FBgn0031395.1 470 687 +
ChrX	stalkie_big_nohaplotig	CDS	2160379	2160570	100	+	0	ID=FBgn0031395.1.mrna1.cds1;Name=FBgn0031395.1;Parent=FBgn0031395.1.mrna1;Target=FBgn0031395.1 1 192 +
ChrX	stalkie_big_nohaplotig	CDS	2160653	2160848	100	+	0	ID=FBgn0031395.1.mrna1.cds2;Name=FBgn0031395.1;Parent=FBgn0031395.1.mrna1;Target=FBgn0031395.1 193 388 +
ChrX	stalkie_big_nohaplotig	CDS	2164923	2165003	100	+	1	ID=FBgn0031395.1.mrna1.cds3;Name=FBgn0031395.1;Parent=FBgn0031395.1.mrna1;Target=FBgn0031395.1 389 469 +
ChrX	stalkie_big_nohaplotig	CDS	2165085	2165302	100	+	1	ID=FBgn0031395.1.mrna1.cds4;Name=FBgn0031395.1;Parent=FBgn0031395.1.mrna1;Target=FBgn0031395.1 470 687 +
Chr1	stalkie_big_nohaplotig	mRNA	41329615	41335319	.	-	.	ID=FBgn0013717.1.mrna1;Name=FBgn0013717.1;Parent=FBgn0013717.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1874;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	41334789	41335319	100	-	.	ID=FBgn0013717.1.mrna1.exon1;Name=FBgn0013717.1;Parent=FBgn0013717.1.mrna1;Target=FBgn0013717.1 1 531 +
Chr1	stalkie_big_nohaplotig	exon	41334272	41334673	100	-	.	ID=FBgn0013717.1.mrna1.exon2;Name=FBgn0013717.1;Parent=FBgn0013717.1.mrna1;Target=FBgn0013717.1 532 933 +
Chr1	stalkie_big_nohaplotig	exon	41333924	41334034	100	-	.	ID=FBgn0013717.1.mrna1.exon3;Name=FBgn0013717.1;Parent=FBgn0013717.1.mrna1;Target=FBgn0013717.1 934 1044 +
Chr1	stalkie_big_nohaplotig	exon	41329718	41330508	99	-	.	ID=FBgn0013717.1.mrna1.exon4;Name=FBgn0013717.1;Parent=FBgn0013717.1.mrna1;Target=FBgn0013717.1 1045 1835 +
Chr1	stalkie_big_nohaplotig	exon	41329615	41329654	100	-	.	ID=FBgn0013717.1.mrna1.exon5;Name=FBgn0013717.1;Parent=FBgn0013717.1.mrna1;Target=FBgn0013717.1 1836 1875 +
Chr1	stalkie_big_nohaplotig	CDS	41334789	41335319	100	-	0	ID=FBgn0013717.1.mrna1.cds1;Name=FBgn0013717.1;Parent=FBgn0013717.1.mrna1;Target=FBgn0013717.1 1 531 +
Chr1	stalkie_big_nohaplotig	CDS	41334272	41334673	100	-	0	ID=FBgn0013717.1.mrna1.cds2;Name=FBgn0013717.1;Parent=FBgn0013717.1.mrna1;Target=FBgn0013717.1 532 933 +
Chr1	stalkie_big_nohaplotig	CDS	41333924	41334034	100	-	0	ID=FBgn0013717.1.mrna1.cds3;Name=FBgn0013717.1;Parent=FBgn0013717.1.mrna1;Target=FBgn0013717.1 934 1044 +
Chr1	stalkie_big_nohaplotig	CDS	41329718	41330508	99	-	0	ID=FBgn0013717.1.mrna1.cds4;Name=FBgn0013717.1;Parent=FBgn0013717.1.mrna1;Target=FBgn0013717.1 1045 1835 +
Chr1	stalkie_big_nohaplotig	CDS	41329615	41329654	100	-	2	ID=FBgn0013717.1.mrna1.cds5;Name=FBgn0013717.1;Parent=FBgn0013717.1.mrna1;Target=FBgn0013717.1 1836 1875 +
ChrX	stalkie_big_nohaplotig	mRNA	30936526	30939750	.	+	.	ID=FBgn0259735.mrna1;Name=FBgn0259735;Parent=FBgn0259735.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3137;mismatches=0;indels=1;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	30936526	30938819	99	+	.	ID=FBgn0259735.mrna1.exon1;Name=FBgn0259735;Parent=FBgn0259735.mrna1;Target=FBgn0259735 1 2295 +
ChrX	stalkie_big_nohaplotig	exon	30938908	30939750	100	+	.	ID=FBgn0259735.mrna1.exon2;Name=FBgn0259735;Parent=FBgn0259735.mrna1;Target=FBgn0259735 2296 3138 +
ChrX	stalkie_big_nohaplotig	CDS	30936528	30936604	98	+	0	ID=FBgn0259735.mrna1.cds1;Name=FBgn0259735;Parent=FBgn0259735.mrna1;Target=FBgn0259735 3 80 +
ChrX	stalkie_big_nohaplotig	mRNA	70753233	70767499	.	-	.	ID=FBgn0026401.1.mrna1;Name=FBgn0026401.1;Parent=FBgn0026401.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=6584;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	70767409	70767499	100	-	.	ID=FBgn0026401.1.mrna1.exon1;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 1 91 +
ChrX	stalkie_big_nohaplotig	exon	70764923	70765094	100	-	.	ID=FBgn0026401.1.mrna1.exon2;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 92 263 +
ChrX	stalkie_big_nohaplotig	exon	70764748	70764866	100	-	.	ID=FBgn0026401.1.mrna1.exon3;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 264 382 +
ChrX	stalkie_big_nohaplotig	exon	70764496	70764691	100	-	.	ID=FBgn0026401.1.mrna1.exon4;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 383 578 +
ChrX	stalkie_big_nohaplotig	exon	70763616	70764427	100	-	.	ID=FBgn0026401.1.mrna1.exon5;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 579 1390 +
ChrX	stalkie_big_nohaplotig	exon	70763249	70763554	100	-	.	ID=FBgn0026401.1.mrna1.exon6;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 1391 1696 +
ChrX	stalkie_big_nohaplotig	exon	70761512	70761676	100	-	.	ID=FBgn0026401.1.mrna1.exon7;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 1697 1861 +
ChrX	stalkie_big_nohaplotig	exon	70760464	70760642	100	-	.	ID=FBgn0026401.1.mrna1.exon8;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 1862 2040 +
ChrX	stalkie_big_nohaplotig	exon	70759949	70760389	100	-	.	ID=FBgn0026401.1.mrna1.exon9;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 2041 2481 +
ChrX	stalkie_big_nohaplotig	exon	70759194	70759886	100	-	.	ID=FBgn0026401.1.mrna1.exon10;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 2482 3174 +
ChrX	stalkie_big_nohaplotig	exon	70758871	70759114	100	-	.	ID=FBgn0026401.1.mrna1.exon11;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 3175 3418 +
ChrX	stalkie_big_nohaplotig	exon	70758495	70758813	100	-	.	ID=FBgn0026401.1.mrna1.exon12;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 3419 3737 +
ChrX	stalkie_big_nohaplotig	exon	70758209	70758437	100	-	.	ID=FBgn0026401.1.mrna1.exon13;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 3738 3966 +
ChrX	stalkie_big_nohaplotig	exon	70757956	70758150	100	-	.	ID=FBgn0026401.1.mrna1.exon14;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 3967 4161 +
ChrX	stalkie_big_nohaplotig	exon	70757726	70757818	100	-	.	ID=FBgn0026401.1.mrna1.exon15;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 4162 4254 +
ChrX	stalkie_big_nohaplotig	exon	70756672	70756986	100	-	.	ID=FBgn0026401.1.mrna1.exon16;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 4255 4569 +
ChrX	stalkie_big_nohaplotig	exon	70756432	70756607	100	-	.	ID=FBgn0026401.1.mrna1.exon17;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 4570 4745 +
ChrX	stalkie_big_nohaplotig	exon	70756219	70756367	100	-	.	ID=FBgn0026401.1.mrna1.exon18;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 4746 4894 +
ChrX	stalkie_big_nohaplotig	exon	70755863	70756147	100	-	.	ID=FBgn0026401.1.mrna1.exon19;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 4895 5179 +
ChrX	stalkie_big_nohaplotig	exon	70755569	70755804	100	-	.	ID=FBgn0026401.1.mrna1.exon20;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 5180 5415 +
ChrX	stalkie_big_nohaplotig	exon	70754980	70755134	100	-	.	ID=FBgn0026401.1.mrna1.exon21;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 5416 5570 +
ChrX	stalkie_big_nohaplotig	exon	70754266	70754923	99	-	.	ID=FBgn0026401.1.mrna1.exon22;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 5571 6228 +
ChrX	stalkie_big_nohaplotig	exon	70753755	70753949	100	-	.	ID=FBgn0026401.1.mrna1.exon23;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 6229 6423 +
ChrX	stalkie_big_nohaplotig	exon	70753233	70753394	100	-	.	ID=FBgn0026401.1.mrna1.exon24;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 6424 6585 +
ChrX	stalkie_big_nohaplotig	CDS	70767409	70767499	100	-	0	ID=FBgn0026401.1.mrna1.cds1;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 1 91 +
ChrX	stalkie_big_nohaplotig	CDS	70764923	70765094	100	-	1	ID=FBgn0026401.1.mrna1.cds2;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 92 263 +
ChrX	stalkie_big_nohaplotig	CDS	70764748	70764866	100	-	2	ID=FBgn0026401.1.mrna1.cds3;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 264 382 +
ChrX	stalkie_big_nohaplotig	CDS	70764496	70764691	100	-	1	ID=FBgn0026401.1.mrna1.cds4;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 383 578 +
ChrX	stalkie_big_nohaplotig	CDS	70763616	70764427	100	-	2	ID=FBgn0026401.1.mrna1.cds5;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 579 1390 +
ChrX	stalkie_big_nohaplotig	CDS	70763249	70763554	100	-	1	ID=FBgn0026401.1.mrna1.cds6;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 1391 1696 +
ChrX	stalkie_big_nohaplotig	CDS	70761512	70761676	100	-	1	ID=FBgn0026401.1.mrna1.cds7;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 1697 1861 +
ChrX	stalkie_big_nohaplotig	CDS	70760464	70760642	100	-	1	ID=FBgn0026401.1.mrna1.cds8;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 1862 2040 +
ChrX	stalkie_big_nohaplotig	CDS	70759949	70760389	100	-	0	ID=FBgn0026401.1.mrna1.cds9;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 2041 2481 +
ChrX	stalkie_big_nohaplotig	CDS	70759194	70759886	100	-	0	ID=FBgn0026401.1.mrna1.cds10;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 2482 3174 +
ChrX	stalkie_big_nohaplotig	CDS	70758871	70759114	100	-	0	ID=FBgn0026401.1.mrna1.cds11;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 3175 3418 +
ChrX	stalkie_big_nohaplotig	CDS	70758495	70758813	100	-	1	ID=FBgn0026401.1.mrna1.cds12;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 3419 3737 +
ChrX	stalkie_big_nohaplotig	CDS	70758209	70758437	100	-	2	ID=FBgn0026401.1.mrna1.cds13;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 3738 3966 +
ChrX	stalkie_big_nohaplotig	CDS	70757956	70758150	100	-	0	ID=FBgn0026401.1.mrna1.cds14;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 3967 4161 +
ChrX	stalkie_big_nohaplotig	CDS	70757726	70757818	100	-	0	ID=FBgn0026401.1.mrna1.cds15;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 4162 4254 +
ChrX	stalkie_big_nohaplotig	CDS	70756672	70756986	100	-	0	ID=FBgn0026401.1.mrna1.cds16;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 4255 4569 +
ChrX	stalkie_big_nohaplotig	CDS	70756432	70756607	100	-	0	ID=FBgn0026401.1.mrna1.cds17;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 4570 4745 +
ChrX	stalkie_big_nohaplotig	CDS	70756219	70756367	100	-	2	ID=FBgn0026401.1.mrna1.cds18;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 4746 4894 +
ChrX	stalkie_big_nohaplotig	CDS	70755863	70756147	100	-	1	ID=FBgn0026401.1.mrna1.cds19;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 4895 5179 +
ChrX	stalkie_big_nohaplotig	CDS	70755569	70755804	100	-	1	ID=FBgn0026401.1.mrna1.cds20;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 5180 5415 +
ChrX	stalkie_big_nohaplotig	CDS	70754980	70755134	100	-	0	ID=FBgn0026401.1.mrna1.cds21;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 5416 5570 +
ChrX	stalkie_big_nohaplotig	CDS	70754266	70754923	99	-	2	ID=FBgn0026401.1.mrna1.cds22;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 5571 6228 +
ChrX	stalkie_big_nohaplotig	CDS	70753755	70753949	100	-	0	ID=FBgn0026401.1.mrna1.cds23;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 6229 6423 +
ChrX	stalkie_big_nohaplotig	CDS	70753233	70753394	100	-	0	ID=FBgn0026401.1.mrna1.cds24;Name=FBgn0026401.1;Parent=FBgn0026401.1.mrna1;Target=FBgn0026401.1 6424 6585 +
ChrX	stalkie_big_nohaplotig	mRNA	70720355	70728426	.	+	.	ID=FBgn0032196.1.mrna1;Name=FBgn0032196.1;Parent=FBgn0032196.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=837;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	70720355	70720409	100	+	.	ID=FBgn0032196.1.mrna1.exon1;Name=FBgn0032196.1;Parent=FBgn0032196.1.mrna1;Target=FBgn0032196.1 1 55 +
ChrX	stalkie_big_nohaplotig	exon	70722793	70723101	100	+	.	ID=FBgn0032196.1.mrna1.exon2;Name=FBgn0032196.1;Parent=FBgn0032196.1.mrna1;Target=FBgn0032196.1 56 364 +
ChrX	stalkie_big_nohaplotig	exon	70724538	70724691	100	+	.	ID=FBgn0032196.1.mrna1.exon3;Name=FBgn0032196.1;Parent=FBgn0032196.1.mrna1;Target=FBgn0032196.1 365 518 +
ChrX	stalkie_big_nohaplotig	exon	70727578	70727769	100	+	.	ID=FBgn0032196.1.mrna1.exon4;Name=FBgn0032196.1;Parent=FBgn0032196.1.mrna1;Target=FBgn0032196.1 519 710 +
ChrX	stalkie_big_nohaplotig	exon	70728300	70728426	100	+	.	ID=FBgn0032196.1.mrna1.exon5;Name=FBgn0032196.1;Parent=FBgn0032196.1.mrna1;Target=FBgn0032196.1 711 837 +
ChrX	stalkie_big_nohaplotig	CDS	70720355	70720409	100	+	0	ID=FBgn0032196.1.mrna1.cds1;Name=FBgn0032196.1;Parent=FBgn0032196.1.mrna1;Target=FBgn0032196.1 1 55 +
ChrX	stalkie_big_nohaplotig	CDS	70722793	70723101	100	+	1	ID=FBgn0032196.1.mrna1.cds2;Name=FBgn0032196.1;Parent=FBgn0032196.1.mrna1;Target=FBgn0032196.1 56 364 +
ChrX	stalkie_big_nohaplotig	CDS	70724538	70724691	100	+	1	ID=FBgn0032196.1.mrna1.cds3;Name=FBgn0032196.1;Parent=FBgn0032196.1.mrna1;Target=FBgn0032196.1 365 518 +
ChrX	stalkie_big_nohaplotig	CDS	70727578	70727769	100	+	2	ID=FBgn0032196.1.mrna1.cds4;Name=FBgn0032196.1;Parent=FBgn0032196.1.mrna1;Target=FBgn0032196.1 519 710 +
ChrX	stalkie_big_nohaplotig	CDS	70728300	70728426	100	+	2	ID=FBgn0032196.1.mrna1.cds5;Name=FBgn0032196.1;Parent=FBgn0032196.1.mrna1;Target=FBgn0032196.1 711 837 +
ChrX	stalkie_big_nohaplotig	mRNA	70594427	70620377	.	+	.	ID=FBgn0259213.1.mrna1;Name=FBgn0259213.1;Parent=FBgn0259213.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3149;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	70594427	70594580	100	+	.	ID=FBgn0259213.1.mrna1.exon1;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 1 154 +
ChrX	stalkie_big_nohaplotig	exon	70602948	70603074	100	+	.	ID=FBgn0259213.1.mrna1.exon2;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 155 281 +
ChrX	stalkie_big_nohaplotig	exon	70603145	70603259	100	+	.	ID=FBgn0259213.1.mrna1.exon3;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 282 396 +
ChrX	stalkie_big_nohaplotig	exon	70603617	70603710	100	+	.	ID=FBgn0259213.1.mrna1.exon4;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 397 490 +
ChrX	stalkie_big_nohaplotig	exon	70603812	70603925	100	+	.	ID=FBgn0259213.1.mrna1.exon5;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 491 604 +
ChrX	stalkie_big_nohaplotig	exon	70604125	70604328	100	+	.	ID=FBgn0259213.1.mrna1.exon6;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 605 808 +
ChrX	stalkie_big_nohaplotig	exon	70605691	70605836	100	+	.	ID=FBgn0259213.1.mrna1.exon7;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 809 954 +
ChrX	stalkie_big_nohaplotig	exon	70607117	70607261	100	+	.	ID=FBgn0259213.1.mrna1.exon8;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 955 1099 +
ChrX	stalkie_big_nohaplotig	exon	70609451	70609581	100	+	.	ID=FBgn0259213.1.mrna1.exon9;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 1100 1230 +
ChrX	stalkie_big_nohaplotig	exon	70611942	70612101	100	+	.	ID=FBgn0259213.1.mrna1.exon10;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 1231 1390 +
ChrX	stalkie_big_nohaplotig	exon	70613581	70613683	100	+	.	ID=FBgn0259213.1.mrna1.exon11;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 1391 1493 +
ChrX	stalkie_big_nohaplotig	exon	70615834	70615945	100	+	.	ID=FBgn0259213.1.mrna1.exon12;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 1494 1605 +
ChrX	stalkie_big_nohaplotig	exon	70616005	70616086	98	+	.	ID=FBgn0259213.1.mrna1.exon13;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 1606 1687 +
ChrX	stalkie_big_nohaplotig	exon	70616151	70616292	100	+	.	ID=FBgn0259213.1.mrna1.exon14;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 1688 1829 +
ChrX	stalkie_big_nohaplotig	exon	70616774	70616955	100	+	.	ID=FBgn0259213.1.mrna1.exon15;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 1830 2011 +
ChrX	stalkie_big_nohaplotig	exon	70617053	70617240	100	+	.	ID=FBgn0259213.1.mrna1.exon16;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 2012 2199 +
ChrX	stalkie_big_nohaplotig	exon	70617305	70617416	100	+	.	ID=FBgn0259213.1.mrna1.exon17;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 2200 2311 +
ChrX	stalkie_big_nohaplotig	exon	70618398	70618501	100	+	.	ID=FBgn0259213.1.mrna1.exon18;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 2312 2415 +
ChrX	stalkie_big_nohaplotig	exon	70619643	70620377	100	+	.	ID=FBgn0259213.1.mrna1.exon19;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 2416 3150 +
ChrX	stalkie_big_nohaplotig	CDS	70594427	70594580	100	+	0	ID=FBgn0259213.1.mrna1.cds1;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 1 154 +
ChrX	stalkie_big_nohaplotig	CDS	70602948	70603074	100	+	1	ID=FBgn0259213.1.mrna1.cds2;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 155 281 +
ChrX	stalkie_big_nohaplotig	CDS	70603145	70603259	100	+	2	ID=FBgn0259213.1.mrna1.cds3;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 282 396 +
ChrX	stalkie_big_nohaplotig	CDS	70603617	70603710	100	+	0	ID=FBgn0259213.1.mrna1.cds4;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 397 490 +
ChrX	stalkie_big_nohaplotig	CDS	70603812	70603925	100	+	1	ID=FBgn0259213.1.mrna1.cds5;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 491 604 +
ChrX	stalkie_big_nohaplotig	CDS	70604125	70604328	100	+	1	ID=FBgn0259213.1.mrna1.cds6;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 605 808 +
ChrX	stalkie_big_nohaplotig	CDS	70605691	70605836	100	+	1	ID=FBgn0259213.1.mrna1.cds7;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 809 954 +
ChrX	stalkie_big_nohaplotig	CDS	70607117	70607261	100	+	0	ID=FBgn0259213.1.mrna1.cds8;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 955 1099 +
ChrX	stalkie_big_nohaplotig	CDS	70609451	70609581	100	+	1	ID=FBgn0259213.1.mrna1.cds9;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 1100 1230 +
ChrX	stalkie_big_nohaplotig	CDS	70611942	70612101	100	+	0	ID=FBgn0259213.1.mrna1.cds10;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 1231 1390 +
ChrX	stalkie_big_nohaplotig	CDS	70613581	70613683	100	+	1	ID=FBgn0259213.1.mrna1.cds11;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 1391 1493 +
ChrX	stalkie_big_nohaplotig	CDS	70615834	70615945	100	+	2	ID=FBgn0259213.1.mrna1.cds12;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 1494 1605 +
ChrX	stalkie_big_nohaplotig	CDS	70616005	70616086	98	+	0	ID=FBgn0259213.1.mrna1.cds13;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 1606 1687 +
ChrX	stalkie_big_nohaplotig	CDS	70616151	70616292	100	+	1	ID=FBgn0259213.1.mrna1.cds14;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 1688 1829 +
ChrX	stalkie_big_nohaplotig	CDS	70616774	70616955	100	+	2	ID=FBgn0259213.1.mrna1.cds15;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 1830 2011 +
ChrX	stalkie_big_nohaplotig	CDS	70617053	70617240	100	+	1	ID=FBgn0259213.1.mrna1.cds16;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 2012 2199 +
ChrX	stalkie_big_nohaplotig	CDS	70617305	70617416	100	+	0	ID=FBgn0259213.1.mrna1.cds17;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 2200 2311 +
ChrX	stalkie_big_nohaplotig	CDS	70618398	70618501	100	+	1	ID=FBgn0259213.1.mrna1.cds18;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 2312 2415 +
ChrX	stalkie_big_nohaplotig	CDS	70619643	70620377	100	+	0	ID=FBgn0259213.1.mrna1.cds19;Name=FBgn0259213.1;Parent=FBgn0259213.1.mrna1;Target=FBgn0259213.1 2416 3150 +
ChrX	stalkie_big_nohaplotig	mRNA	71137759	71138453	.	+	.	ID=FBgn0051717.1.mrna1;Name=FBgn0051717.1;Parent=FBgn0051717.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=637;mismatches=2;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	71137759	71137782	100	+	.	ID=FBgn0051717.1.mrna1.exon1;Name=FBgn0051717.1;Parent=FBgn0051717.1.mrna1;Target=FBgn0051717.1 1 24 +
ChrX	stalkie_big_nohaplotig	exon	71137839	71138453	99	+	.	ID=FBgn0051717.1.mrna1.exon2;Name=FBgn0051717.1;Parent=FBgn0051717.1.mrna1;Target=FBgn0051717.1 25 639 +
ChrX	stalkie_big_nohaplotig	CDS	71137759	71137782	100	+	0	ID=FBgn0051717.1.mrna1.cds1;Name=FBgn0051717.1;Parent=FBgn0051717.1.mrna1;Target=FBgn0051717.1 1 24 +
ChrX	stalkie_big_nohaplotig	CDS	71137839	71138453	99	+	0	ID=FBgn0051717.1.mrna1.cds2;Name=FBgn0051717.1;Parent=FBgn0051717.1.mrna1;Target=FBgn0051717.1 25 639 +
ChrX	stalkie_big_nohaplotig	mRNA	37614337	37614899	.	+	.	ID=FBgn0041781.mrna1;Name=FBgn0041781;Parent=FBgn0041781.path1;Dir=indeterminatecoverage=100.0;identity=99.5;matches=561;mismatches=2;indels=1;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	37614337	37614899	99	+	.	ID=FBgn0041781.mrna1.exon1;Name=FBgn0041781;Parent=FBgn0041781.mrna1;Target=FBgn0041781 564 1 .
ChrX	stalkie_big_nohaplotig	CDS	37614337	37614899	99	+	0	ID=FBgn0041781.mrna1.cds1;Name=FBgn0041781;Parent=FBgn0041781.mrna1;Target=FBgn0041781 564 1 .
ChrX	stalkie_big_nohaplotig	mRNA	37547530	37548720	.	-	.	ID=FBgn0015818.1.mrna1;Name=FBgn0015818.1;Parent=FBgn0015818.1.path1;Dir=sensecoverage=100.0;identity=99.7;matches=1074;mismatches=3;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	37548657	37548720	100	-	.	ID=FBgn0015818.1.mrna1.exon1;Name=FBgn0015818.1;Parent=FBgn0015818.1.mrna1;Target=FBgn0015818.1 1 64 +
ChrX	stalkie_big_nohaplotig	exon	37548522	37548605	100	-	.	ID=FBgn0015818.1.mrna1.exon2;Name=FBgn0015818.1;Parent=FBgn0015818.1.mrna1;Target=FBgn0015818.1 65 148 +
ChrX	stalkie_big_nohaplotig	exon	37547530	37548458	99	-	.	ID=FBgn0015818.1.mrna1.exon3;Name=FBgn0015818.1;Parent=FBgn0015818.1.mrna1;Target=FBgn0015818.1 149 1077 +
ChrX	stalkie_big_nohaplotig	CDS	37548657	37548720	100	-	0	ID=FBgn0015818.1.mrna1.cds1;Name=FBgn0015818.1;Parent=FBgn0015818.1.mrna1;Target=FBgn0015818.1 1 64 +
ChrX	stalkie_big_nohaplotig	CDS	37548522	37548605	100	-	1	ID=FBgn0015818.1.mrna1.cds2;Name=FBgn0015818.1;Parent=FBgn0015818.1.mrna1;Target=FBgn0015818.1 65 148 +
ChrX	stalkie_big_nohaplotig	CDS	37547530	37548458	99	-	1	ID=FBgn0015818.1.mrna1.cds3;Name=FBgn0015818.1;Parent=FBgn0015818.1.mrna1;Target=FBgn0015818.1 149 1077 +
ChrX	stalkie_big_nohaplotig	mRNA	37506671	37540390	.	-	.	ID=FBgn0026147.1.mrna1;Name=FBgn0026147.1;Parent=FBgn0026147.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=3697;mismatches=5;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	37539759	37540390	99	-	.	ID=FBgn0026147.1.mrna1.exon1;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 1 632 +
ChrX	stalkie_big_nohaplotig	exon	37535824	37536138	100	-	.	ID=FBgn0026147.1.mrna1.exon2;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 633 947 +
ChrX	stalkie_big_nohaplotig	exon	37532603	37533210	99	-	.	ID=FBgn0026147.1.mrna1.exon3;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 948 1555 +
ChrX	stalkie_big_nohaplotig	exon	37532163	37532498	100	-	.	ID=FBgn0026147.1.mrna1.exon4;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 1556 1891 +
ChrX	stalkie_big_nohaplotig	exon	37531774	37532100	100	-	.	ID=FBgn0026147.1.mrna1.exon5;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 1892 2218 +
ChrX	stalkie_big_nohaplotig	exon	37531521	37531707	100	-	.	ID=FBgn0026147.1.mrna1.exon6;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 2219 2405 +
ChrX	stalkie_big_nohaplotig	exon	37531288	37531458	100	-	.	ID=FBgn0026147.1.mrna1.exon7;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 2406 2576 +
ChrX	stalkie_big_nohaplotig	exon	37529422	37529546	100	-	.	ID=FBgn0026147.1.mrna1.exon8;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 2577 2701 +
ChrX	stalkie_big_nohaplotig	exon	37528890	37529329	99	-	.	ID=FBgn0026147.1.mrna1.exon9;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 2702 3141 +
ChrX	stalkie_big_nohaplotig	exon	37528612	37528779	100	-	.	ID=FBgn0026147.1.mrna1.exon10;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 3142 3309 +
ChrX	stalkie_big_nohaplotig	exon	37525090	37525368	99	-	.	ID=FBgn0026147.1.mrna1.exon11;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 3310 3588 +
ChrX	stalkie_big_nohaplotig	exon	37506671	37506784	100	-	.	ID=FBgn0026147.1.mrna1.exon12;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 3589 3702 +
ChrX	stalkie_big_nohaplotig	CDS	37539759	37540390	99	-	0	ID=FBgn0026147.1.mrna1.cds1;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 1 632 +
ChrX	stalkie_big_nohaplotig	CDS	37535824	37536138	100	-	2	ID=FBgn0026147.1.mrna1.cds2;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 633 947 +
ChrX	stalkie_big_nohaplotig	CDS	37532603	37533210	99	-	2	ID=FBgn0026147.1.mrna1.cds3;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 948 1555 +
ChrX	stalkie_big_nohaplotig	CDS	37532163	37532498	100	-	1	ID=FBgn0026147.1.mrna1.cds4;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 1556 1891 +
ChrX	stalkie_big_nohaplotig	CDS	37531774	37532100	100	-	1	ID=FBgn0026147.1.mrna1.cds5;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 1892 2218 +
ChrX	stalkie_big_nohaplotig	CDS	37531521	37531707	100	-	1	ID=FBgn0026147.1.mrna1.cds6;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 2219 2405 +
ChrX	stalkie_big_nohaplotig	CDS	37531288	37531458	100	-	2	ID=FBgn0026147.1.mrna1.cds7;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 2406 2576 +
ChrX	stalkie_big_nohaplotig	CDS	37529422	37529546	100	-	2	ID=FBgn0026147.1.mrna1.cds8;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 2577 2701 +
ChrX	stalkie_big_nohaplotig	CDS	37528890	37529329	99	-	1	ID=FBgn0026147.1.mrna1.cds9;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 2702 3141 +
ChrX	stalkie_big_nohaplotig	CDS	37528612	37528779	100	-	0	ID=FBgn0026147.1.mrna1.cds10;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 3142 3309 +
ChrX	stalkie_big_nohaplotig	CDS	37525090	37525368	99	-	0	ID=FBgn0026147.1.mrna1.cds11;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 3310 3588 +
ChrX	stalkie_big_nohaplotig	CDS	37506671	37506784	100	-	0	ID=FBgn0026147.1.mrna1.cds12;Name=FBgn0026147.1;Parent=FBgn0026147.1.mrna1;Target=FBgn0026147.1 3589 3702 +
ChrX	stalkie_big_nohaplotig	mRNA	37553711	37556808	.	-	.	ID=FBgn0026148.1.mrna1;Name=FBgn0026148.1;Parent=FBgn0026148.1.path1;Dir=sensecoverage=100.0;identity=99.9;matches=1166;mismatches=1;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	37556443	37556808	100	-	.	ID=FBgn0026148.1.mrna1.exon1;Name=FBgn0026148.1;Parent=FBgn0026148.1.mrna1;Target=FBgn0026148.1 1 366 +
ChrX	stalkie_big_nohaplotig	exon	37556100	37556381	100	-	.	ID=FBgn0026148.1.mrna1.exon2;Name=FBgn0026148.1;Parent=FBgn0026148.1.mrna1;Target=FBgn0026148.1 367 648 +
ChrX	stalkie_big_nohaplotig	exon	37555626	37556025	99	-	.	ID=FBgn0026148.1.mrna1.exon3;Name=FBgn0026148.1;Parent=FBgn0026148.1.mrna1;Target=FBgn0026148.1 649 1048 +
ChrX	stalkie_big_nohaplotig	exon	37553711	37553829	100	-	.	ID=FBgn0026148.1.mrna1.exon4;Name=FBgn0026148.1;Parent=FBgn0026148.1.mrna1;Target=FBgn0026148.1 1049 1167 +
ChrX	stalkie_big_nohaplotig	CDS	37556443	37556808	100	-	0	ID=FBgn0026148.1.mrna1.cds1;Name=FBgn0026148.1;Parent=FBgn0026148.1.mrna1;Target=FBgn0026148.1 1 366 +
ChrX	stalkie_big_nohaplotig	CDS	37556100	37556381	100	-	0	ID=FBgn0026148.1.mrna1.cds2;Name=FBgn0026148.1;Parent=FBgn0026148.1.mrna1;Target=FBgn0026148.1 367 648 +
ChrX	stalkie_big_nohaplotig	CDS	37555626	37556025	99	-	0	ID=FBgn0026148.1.mrna1.cds3;Name=FBgn0026148.1;Parent=FBgn0026148.1.mrna1;Target=FBgn0026148.1 649 1048 +
ChrX	stalkie_big_nohaplotig	CDS	37553711	37553829	100	-	1	ID=FBgn0026148.1.mrna1.cds4;Name=FBgn0026148.1;Parent=FBgn0026148.1.mrna1;Target=FBgn0026148.1 1049 1167 +
Chr1	stalkie_big_nohaplotig	mRNA	119083987	119087089	.	+	.	ID=FBgn0035195.1.mrna1;Name=FBgn0035195.1;Parent=FBgn0035195.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1775;mismatches=4;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	119083987	119084033	100	+	.	ID=FBgn0035195.1.mrna1.exon1;Name=FBgn0035195.1;Parent=FBgn0035195.1.mrna1;Target=FBgn0035195.1 1 47 +
Chr1	stalkie_big_nohaplotig	exon	119084115	119084206	100	+	.	ID=FBgn0035195.1.mrna1.exon2;Name=FBgn0035195.1;Parent=FBgn0035195.1.mrna1;Target=FBgn0035195.1 48 139 +
Chr1	stalkie_big_nohaplotig	exon	119084618	119084949	100	+	.	ID=FBgn0035195.1.mrna1.exon3;Name=FBgn0035195.1;Parent=FBgn0035195.1.mrna1;Target=FBgn0035195.1 140 471 +
Chr1	stalkie_big_nohaplotig	exon	119085012	119085120	100	+	.	ID=FBgn0035195.1.mrna1.exon4;Name=FBgn0035195.1;Parent=FBgn0035195.1.mrna1;Target=FBgn0035195.1 472 580 +
Chr1	stalkie_big_nohaplotig	exon	119085179	119085366	99	+	.	ID=FBgn0035195.1.mrna1.exon5;Name=FBgn0035195.1;Parent=FBgn0035195.1.mrna1;Target=FBgn0035195.1 581 768 +
Chr1	stalkie_big_nohaplotig	exon	119085422	119085577	100	+	.	ID=FBgn0035195.1.mrna1.exon6;Name=FBgn0035195.1;Parent=FBgn0035195.1.mrna1;Target=FBgn0035195.1 769 924 +
Chr1	stalkie_big_nohaplotig	exon	119085644	119086033	99	+	.	ID=FBgn0035195.1.mrna1.exon7;Name=FBgn0035195.1;Parent=FBgn0035195.1.mrna1;Target=FBgn0035195.1 925 1314 +
Chr1	stalkie_big_nohaplotig	exon	119086097	119086264	100	+	.	ID=FBgn0035195.1.mrna1.exon8;Name=FBgn0035195.1;Parent=FBgn0035195.1.mrna1;Target=FBgn0035195.1 1315 1482 +
Chr1	stalkie_big_nohaplotig	exon	119086725	119086826	98	+	.	ID=FBgn0035195.1.mrna1.exon9;Name=FBgn0035195.1;Parent=FBgn0035195.1.mrna1;Target=FBgn0035195.1 1483 1584 +
Chr1	stalkie_big_nohaplotig	exon	119086895	119087089	100	+	.	ID=FBgn0035195.1.mrna1.exon10;Name=FBgn0035195.1;Parent=FBgn0035195.1.mrna1;Target=FBgn0035195.1 1585 1779 +
Chr1	stalkie_big_nohaplotig	CDS	119083987	119084033	100	+	0	ID=FBgn0035195.1.mrna1.cds1;Name=FBgn0035195.1;Parent=FBgn0035195.1.mrna1;Target=FBgn0035195.1 1 47 +
Chr1	stalkie_big_nohaplotig	CDS	119084115	119084206	100	+	2	ID=FBgn0035195.1.mrna1.cds2;Name=FBgn0035195.1;Parent=FBgn0035195.1.mrna1;Target=FBgn0035195.1 48 139 +
Chr1	stalkie_big_nohaplotig	CDS	119084618	119084949	100	+	1	ID=FBgn0035195.1.mrna1.cds3;Name=FBgn0035195.1;Parent=FBgn0035195.1.mrna1;Target=FBgn0035195.1 140 471 +
Chr1	stalkie_big_nohaplotig	CDS	119085012	119085120	100	+	0	ID=FBgn0035195.1.mrna1.cds4;Name=FBgn0035195.1;Parent=FBgn0035195.1.mrna1;Target=FBgn0035195.1 472 580 +
Chr1	stalkie_big_nohaplotig	CDS	119085179	119085366	99	+	1	ID=FBgn0035195.1.mrna1.cds5;Name=FBgn0035195.1;Parent=FBgn0035195.1.mrna1;Target=FBgn0035195.1 581 768 +
Chr1	stalkie_big_nohaplotig	CDS	119085422	119085577	100	+	0	ID=FBgn0035195.1.mrna1.cds6;Name=FBgn0035195.1;Parent=FBgn0035195.1.mrna1;Target=FBgn0035195.1 769 924 +
Chr1	stalkie_big_nohaplotig	CDS	119085644	119086033	99	+	0	ID=FBgn0035195.1.mrna1.cds7;Name=FBgn0035195.1;Parent=FBgn0035195.1.mrna1;Target=FBgn0035195.1 925 1314 +
Chr1	stalkie_big_nohaplotig	CDS	119086097	119086264	100	+	0	ID=FBgn0035195.1.mrna1.cds8;Name=FBgn0035195.1;Parent=FBgn0035195.1.mrna1;Target=FBgn0035195.1 1315 1482 +
Chr1	stalkie_big_nohaplotig	CDS	119086725	119086826	98	+	0	ID=FBgn0035195.1.mrna1.cds9;Name=FBgn0035195.1;Parent=FBgn0035195.1.mrna1;Target=FBgn0035195.1 1483 1584 +
Chr1	stalkie_big_nohaplotig	CDS	119086895	119087089	100	+	0	ID=FBgn0035195.1.mrna1.cds10;Name=FBgn0035195.1;Parent=FBgn0035195.1.mrna1;Target=FBgn0035195.1 1585 1779 +
ChrX	stalkie_big_nohaplotig	mRNA	16121999	16123639	.	+	.	ID=ORF575.mrna1;Name=ORF575;Parent=ORF575.path1;Dir=indeterminatecoverage=100.0;identity=99.9;matches=1639;mismatches=2;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	16121999	16123639	99	+	.	ID=ORF575.mrna1.exon1;Name=ORF575;Parent=ORF575.mrna1;Target=ORF575 1641 1 .
ChrX	stalkie_big_nohaplotig	CDS	16121999	16123639	99	+	0	ID=ORF575.mrna1.cds1;Name=ORF575;Parent=ORF575.mrna1;Target=ORF575 1641 1 .
ChrX	stalkie_big_nohaplotig	mRNA	16041305	16042945	.	+	.	ID=FBgn0000253.25.mrna1;Name=FBgn0000253.25;Parent=FBgn0000253.25.path1;Dir=indeterminatecoverage=100.0;identity=99.4;matches=1634;mismatches=7;indels=3;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	16041305	16042945	99	+	.	ID=FBgn0000253.25.mrna1.exon1;Name=FBgn0000253.25;Parent=FBgn0000253.25.mrna1;Target=FBgn0000253.25 1644 1 .
ChrX	stalkie_big_nohaplotig	CDS	16041305	16042945	99	+	0	ID=FBgn0000253.25.mrna1.cds1;Name=FBgn0000253.25;Parent=FBgn0000253.25.mrna1;Target=FBgn0000253.25 1644 1 .
Chr2	stalkie_big_nohaplotig	mRNA	110696789	110709848	.	+	.	ID=FBgn0082831.1.mrna1;Name=FBgn0082831.1;Parent=FBgn0082831.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=6514;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	110696789	110696815	100	+	.	ID=FBgn0082831.1.mrna1.exon1;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 1 27 +
Chr2	stalkie_big_nohaplotig	exon	110696872	110697028	100	+	.	ID=FBgn0082831.1.mrna1.exon2;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 28 184 +
Chr2	stalkie_big_nohaplotig	exon	110697257	110697673	99	+	.	ID=FBgn0082831.1.mrna1.exon3;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 185 601 +
Chr2	stalkie_big_nohaplotig	exon	110697730	110698580	99	+	.	ID=FBgn0082831.1.mrna1.exon4;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 602 1452 +
Chr2	stalkie_big_nohaplotig	exon	110698648	110699346	100	+	.	ID=FBgn0082831.1.mrna1.exon5;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 1453 2151 +
Chr2	stalkie_big_nohaplotig	exon	110700023	110700552	100	+	.	ID=FBgn0082831.1.mrna1.exon6;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 2152 2681 +
Chr2	stalkie_big_nohaplotig	exon	110703010	110703187	100	+	.	ID=FBgn0082831.1.mrna1.exon7;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 2682 2859 +
Chr2	stalkie_big_nohaplotig	exon	110703247	110703445	100	+	.	ID=FBgn0082831.1.mrna1.exon8;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 2860 3058 +
Chr2	stalkie_big_nohaplotig	exon	110703502	110703884	100	+	.	ID=FBgn0082831.1.mrna1.exon9;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 3059 3441 +
Chr2	stalkie_big_nohaplotig	exon	110705832	110705972	100	+	.	ID=FBgn0082831.1.mrna1.exon10;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 3442 3582 +
Chr2	stalkie_big_nohaplotig	exon	110706051	110708243	100	+	.	ID=FBgn0082831.1.mrna1.exon11;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 3583 5775 +
Chr2	stalkie_big_nohaplotig	exon	110708299	110708446	100	+	.	ID=FBgn0082831.1.mrna1.exon12;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 5776 5923 +
Chr2	stalkie_big_nohaplotig	exon	110708517	110708704	100	+	.	ID=FBgn0082831.1.mrna1.exon13;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 5924 6111 +
Chr2	stalkie_big_nohaplotig	exon	110709390	110709636	100	+	.	ID=FBgn0082831.1.mrna1.exon14;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 6112 6358 +
Chr2	stalkie_big_nohaplotig	exon	110709691	110709848	100	+	.	ID=FBgn0082831.1.mrna1.exon15;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 6359 6516 +
Chr2	stalkie_big_nohaplotig	CDS	110696789	110696815	100	+	0	ID=FBgn0082831.1.mrna1.cds1;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 1 27 +
Chr2	stalkie_big_nohaplotig	CDS	110696872	110697028	100	+	0	ID=FBgn0082831.1.mrna1.cds2;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 28 184 +
Chr2	stalkie_big_nohaplotig	CDS	110697257	110697673	99	+	1	ID=FBgn0082831.1.mrna1.cds3;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 185 601 +
Chr2	stalkie_big_nohaplotig	CDS	110697730	110698580	99	+	1	ID=FBgn0082831.1.mrna1.cds4;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 602 1452 +
Chr2	stalkie_big_nohaplotig	CDS	110698648	110699346	100	+	0	ID=FBgn0082831.1.mrna1.cds5;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 1453 2151 +
Chr2	stalkie_big_nohaplotig	CDS	110700023	110700552	100	+	0	ID=FBgn0082831.1.mrna1.cds6;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 2152 2681 +
Chr2	stalkie_big_nohaplotig	CDS	110703010	110703187	100	+	2	ID=FBgn0082831.1.mrna1.cds7;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 2682 2859 +
Chr2	stalkie_big_nohaplotig	CDS	110703247	110703445	100	+	0	ID=FBgn0082831.1.mrna1.cds8;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 2860 3058 +
Chr2	stalkie_big_nohaplotig	CDS	110703502	110703884	100	+	1	ID=FBgn0082831.1.mrna1.cds9;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 3059 3441 +
Chr2	stalkie_big_nohaplotig	CDS	110705832	110705972	100	+	0	ID=FBgn0082831.1.mrna1.cds10;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 3442 3582 +
Chr2	stalkie_big_nohaplotig	CDS	110706051	110708243	100	+	0	ID=FBgn0082831.1.mrna1.cds11;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 3583 5775 +
Chr2	stalkie_big_nohaplotig	CDS	110708299	110708446	100	+	0	ID=FBgn0082831.1.mrna1.cds12;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 5776 5923 +
Chr2	stalkie_big_nohaplotig	CDS	110708517	110708704	100	+	1	ID=FBgn0082831.1.mrna1.cds13;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 5924 6111 +
Chr2	stalkie_big_nohaplotig	CDS	110709390	110709636	100	+	0	ID=FBgn0082831.1.mrna1.cds14;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 6112 6358 +
Chr2	stalkie_big_nohaplotig	CDS	110709691	110709848	100	+	1	ID=FBgn0082831.1.mrna1.cds15;Name=FBgn0082831.1;Parent=FBgn0082831.1.mrna1;Target=FBgn0082831.1 6359 6516 +
Chr2	stalkie_big_nohaplotig	mRNA	110222143	110223490	.	-	.	ID=FBgn0260744.1.mrna1;Name=FBgn0260744.1;Parent=FBgn0260744.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1167;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	110223402	110223490	100	-	.	ID=FBgn0260744.1.mrna1.exon1;Name=FBgn0260744.1;Parent=FBgn0260744.1.mrna1;Target=FBgn0260744.1 1 89 +
Chr2	stalkie_big_nohaplotig	exon	110223201	110223348	100	-	.	ID=FBgn0260744.1.mrna1.exon2;Name=FBgn0260744.1;Parent=FBgn0260744.1.mrna1;Target=FBgn0260744.1 90 237 +
Chr2	stalkie_big_nohaplotig	exon	110222979	110223132	100	-	.	ID=FBgn0260744.1.mrna1.exon3;Name=FBgn0260744.1;Parent=FBgn0260744.1.mrna1;Target=FBgn0260744.1 238 391 +
Chr2	stalkie_big_nohaplotig	exon	110222143	110222918	100	-	.	ID=FBgn0260744.1.mrna1.exon4;Name=FBgn0260744.1;Parent=FBgn0260744.1.mrna1;Target=FBgn0260744.1 392 1167 +
Chr2	stalkie_big_nohaplotig	CDS	110223402	110223490	100	-	0	ID=FBgn0260744.1.mrna1.cds1;Name=FBgn0260744.1;Parent=FBgn0260744.1.mrna1;Target=FBgn0260744.1 1 89 +
Chr2	stalkie_big_nohaplotig	CDS	110223201	110223348	100	-	2	ID=FBgn0260744.1.mrna1.cds2;Name=FBgn0260744.1;Parent=FBgn0260744.1.mrna1;Target=FBgn0260744.1 90 237 +
Chr2	stalkie_big_nohaplotig	CDS	110222979	110223132	100	-	0	ID=FBgn0260744.1.mrna1.cds3;Name=FBgn0260744.1;Parent=FBgn0260744.1.mrna1;Target=FBgn0260744.1 238 391 +
Chr2	stalkie_big_nohaplotig	CDS	110222143	110222918	100	-	1	ID=FBgn0260744.1.mrna1.cds4;Name=FBgn0260744.1;Parent=FBgn0260744.1.mrna1;Target=FBgn0260744.1 392 1167 +
Chr2	stalkie_big_nohaplotig	mRNA	110164366	110167946	.	+	.	ID=FBgn0027950.1.mrna1;Name=FBgn0027950.1;Parent=FBgn0027950.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=608;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	110164366	110164493	100	+	.	ID=FBgn0027950.1.mrna1.exon1;Name=FBgn0027950.1;Parent=FBgn0027950.1.mrna1;Target=FBgn0027950.1 1 128 +
Chr2	stalkie_big_nohaplotig	exon	110167409	110167638	100	+	.	ID=FBgn0027950.1.mrna1.exon2;Name=FBgn0027950.1;Parent=FBgn0027950.1.mrna1;Target=FBgn0027950.1 129 358 +
Chr2	stalkie_big_nohaplotig	exon	110167696	110167946	99	+	.	ID=FBgn0027950.1.mrna1.exon3;Name=FBgn0027950.1;Parent=FBgn0027950.1.mrna1;Target=FBgn0027950.1 359 609 +
Chr2	stalkie_big_nohaplotig	CDS	110164366	110164493	100	+	0	ID=FBgn0027950.1.mrna1.cds1;Name=FBgn0027950.1;Parent=FBgn0027950.1.mrna1;Target=FBgn0027950.1 1 128 +
Chr2	stalkie_big_nohaplotig	CDS	110167409	110167638	100	+	2	ID=FBgn0027950.1.mrna1.cds2;Name=FBgn0027950.1;Parent=FBgn0027950.1.mrna1;Target=FBgn0027950.1 129 358 +
Chr2	stalkie_big_nohaplotig	CDS	110167696	110167946	99	+	1	ID=FBgn0027950.1.mrna1.cds3;Name=FBgn0027950.1;Parent=FBgn0027950.1.mrna1;Target=FBgn0027950.1 359 609 +
Chr2	stalkie_big_nohaplotig	mRNA	110621618	110635140	.	-	.	ID=FBgn0001296.1.mrna1;Name=FBgn0001296.1;Parent=FBgn0001296.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=1962;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	110635051	110635140	100	-	.	ID=FBgn0001296.1.mrna1.exon1;Name=FBgn0001296.1;Parent=FBgn0001296.1.mrna1;Target=FBgn0001296.1 1 90 +
Chr2	stalkie_big_nohaplotig	exon	110633759	110634113	100	-	.	ID=FBgn0001296.1.mrna1.exon2;Name=FBgn0001296.1;Parent=FBgn0001296.1.mrna1;Target=FBgn0001296.1 91 445 +
Chr2	stalkie_big_nohaplotig	exon	110622599	110623747	100	-	.	ID=FBgn0001296.1.mrna1.exon3;Name=FBgn0001296.1;Parent=FBgn0001296.1.mrna1;Target=FBgn0001296.1 446 1594 +
Chr2	stalkie_big_nohaplotig	exon	110621618	110621985	100	-	.	ID=FBgn0001296.1.mrna1.exon4;Name=FBgn0001296.1;Parent=FBgn0001296.1.mrna1;Target=FBgn0001296.1 1595 1962 +
Chr2	stalkie_big_nohaplotig	CDS	110635051	110635140	100	-	0	ID=FBgn0001296.1.mrna1.cds1;Name=FBgn0001296.1;Parent=FBgn0001296.1.mrna1;Target=FBgn0001296.1 1 90 +
Chr2	stalkie_big_nohaplotig	CDS	110633759	110634113	100	-	0	ID=FBgn0001296.1.mrna1.cds2;Name=FBgn0001296.1;Parent=FBgn0001296.1.mrna1;Target=FBgn0001296.1 91 445 +
Chr2	stalkie_big_nohaplotig	CDS	110622599	110623747	100	-	1	ID=FBgn0001296.1.mrna1.cds3;Name=FBgn0001296.1;Parent=FBgn0001296.1.mrna1;Target=FBgn0001296.1 446 1594 +
Chr2	stalkie_big_nohaplotig	CDS	110621618	110621985	100	-	1	ID=FBgn0001296.1.mrna1.cds4;Name=FBgn0001296.1;Parent=FBgn0001296.1.mrna1;Target=FBgn0001296.1 1595 1962 +
Chr2	stalkie_big_nohaplotig	mRNA	110481894	110491153	.	+	.	ID=FBgn0027341.1.mrna1;Name=FBgn0027341.1;Parent=FBgn0027341.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=2118;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	110481894	110481936	100	+	.	ID=FBgn0027341.1.mrna1.exon1;Name=FBgn0027341.1;Parent=FBgn0027341.1.mrna1;Target=FBgn0027341.1 1 43 +
Chr2	stalkie_big_nohaplotig	exon	110483258	110483455	100	+	.	ID=FBgn0027341.1.mrna1.exon2;Name=FBgn0027341.1;Parent=FBgn0027341.1.mrna1;Target=FBgn0027341.1 44 241 +
Chr2	stalkie_big_nohaplotig	exon	110483514	110483827	100	+	.	ID=FBgn0027341.1.mrna1.exon3;Name=FBgn0027341.1;Parent=FBgn0027341.1.mrna1;Target=FBgn0027341.1 242 555 +
Chr2	stalkie_big_nohaplotig	exon	110483979	110484120	100	+	.	ID=FBgn0027341.1.mrna1.exon4;Name=FBgn0027341.1;Parent=FBgn0027341.1.mrna1;Target=FBgn0027341.1 556 697 +
Chr2	stalkie_big_nohaplotig	exon	110484880	110484906	100	+	.	ID=FBgn0027341.1.mrna1.exon5;Name=FBgn0027341.1;Parent=FBgn0027341.1.mrna1;Target=FBgn0027341.1 698 724 +
Chr2	stalkie_big_nohaplotig	exon	110485217	110485240	100	+	.	ID=FBgn0027341.1.mrna1.exon6;Name=FBgn0027341.1;Parent=FBgn0027341.1.mrna1;Target=FBgn0027341.1 725 748 +
Chr2	stalkie_big_nohaplotig	exon	110489657	110489814	100	+	.	ID=FBgn0027341.1.mrna1.exon7;Name=FBgn0027341.1;Parent=FBgn0027341.1.mrna1;Target=FBgn0027341.1 749 906 +
Chr2	stalkie_big_nohaplotig	exon	110489877	110490716	100	+	.	ID=FBgn0027341.1.mrna1.exon8;Name=FBgn0027341.1;Parent=FBgn0027341.1.mrna1;Target=FBgn0027341.1 907 1746 +
Chr2	stalkie_big_nohaplotig	exon	110490782	110491153	100	+	.	ID=FBgn0027341.1.mrna1.exon9;Name=FBgn0027341.1;Parent=FBgn0027341.1.mrna1;Target=FBgn0027341.1 1747 2118 +
Chr2	stalkie_big_nohaplotig	CDS	110481894	110481936	100	+	0	ID=FBgn0027341.1.mrna1.cds1;Name=FBgn0027341.1;Parent=FBgn0027341.1.mrna1;Target=FBgn0027341.1 1 43 +
Chr2	stalkie_big_nohaplotig	CDS	110483258	110483455	100	+	1	ID=FBgn0027341.1.mrna1.cds2;Name=FBgn0027341.1;Parent=FBgn0027341.1.mrna1;Target=FBgn0027341.1 44 241 +
Chr2	stalkie_big_nohaplotig	CDS	110483514	110483827	100	+	1	ID=FBgn0027341.1.mrna1.cds3;Name=FBgn0027341.1;Parent=FBgn0027341.1.mrna1;Target=FBgn0027341.1 242 555 +
Chr2	stalkie_big_nohaplotig	CDS	110483979	110484120	100	+	0	ID=FBgn0027341.1.mrna1.cds4;Name=FBgn0027341.1;Parent=FBgn0027341.1.mrna1;Target=FBgn0027341.1 556 697 +
Chr2	stalkie_big_nohaplotig	CDS	110484880	110484906	100	+	1	ID=FBgn0027341.1.mrna1.cds5;Name=FBgn0027341.1;Parent=FBgn0027341.1.mrna1;Target=FBgn0027341.1 698 724 +
Chr2	stalkie_big_nohaplotig	CDS	110485217	110485240	100	+	1	ID=FBgn0027341.1.mrna1.cds6;Name=FBgn0027341.1;Parent=FBgn0027341.1.mrna1;Target=FBgn0027341.1 725 748 +
Chr2	stalkie_big_nohaplotig	CDS	110489657	110489814	100	+	1	ID=FBgn0027341.1.mrna1.cds7;Name=FBgn0027341.1;Parent=FBgn0027341.1.mrna1;Target=FBgn0027341.1 749 906 +
Chr2	stalkie_big_nohaplotig	CDS	110489877	110490716	100	+	0	ID=FBgn0027341.1.mrna1.cds8;Name=FBgn0027341.1;Parent=FBgn0027341.1.mrna1;Target=FBgn0027341.1 907 1746 +
Chr2	stalkie_big_nohaplotig	CDS	110490782	110491153	100	+	0	ID=FBgn0027341.1.mrna1.cds9;Name=FBgn0027341.1;Parent=FBgn0027341.1.mrna1;Target=FBgn0027341.1 1747 2118 +
Chr2	stalkie_big_nohaplotig	mRNA	109821394	109825946	.	+	.	ID=FBgn0028997.1.mrna1;Name=FBgn0028997.1;Parent=FBgn0028997.1.path1;Dir=sensecoverage=100.0;identity=99.6;matches=1180;mismatches=5;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	109821394	109821447	100	+	.	ID=FBgn0028997.1.mrna1.exon1;Name=FBgn0028997.1;Parent=FBgn0028997.1.mrna1;Target=FBgn0028997.1 1 54 +
Chr2	stalkie_big_nohaplotig	exon	109822055	109822159	100	+	.	ID=FBgn0028997.1.mrna1.exon2;Name=FBgn0028997.1;Parent=FBgn0028997.1.mrna1;Target=FBgn0028997.1 55 159 +
Chr2	stalkie_big_nohaplotig	exon	109822224	109822390	100	+	.	ID=FBgn0028997.1.mrna1.exon3;Name=FBgn0028997.1;Parent=FBgn0028997.1.mrna1;Target=FBgn0028997.1 160 326 +
Chr2	stalkie_big_nohaplotig	exon	109822456	109822620	99	+	.	ID=FBgn0028997.1.mrna1.exon4;Name=FBgn0028997.1;Parent=FBgn0028997.1.mrna1;Target=FBgn0028997.1 327 491 +
Chr2	stalkie_big_nohaplotig	exon	109822707	109822911	100	+	.	ID=FBgn0028997.1.mrna1.exon5;Name=FBgn0028997.1;Parent=FBgn0028997.1.mrna1;Target=FBgn0028997.1 492 696 +
Chr2	stalkie_big_nohaplotig	exon	109823092	109823197	100	+	.	ID=FBgn0028997.1.mrna1.exon6;Name=FBgn0028997.1;Parent=FBgn0028997.1.mrna1;Target=FBgn0028997.1 697 802 +
Chr2	stalkie_big_nohaplotig	exon	109824277	109824410	100	+	.	ID=FBgn0028997.1.mrna1.exon7;Name=FBgn0028997.1;Parent=FBgn0028997.1.mrna1;Target=FBgn0028997.1 803 936 +
Chr2	stalkie_big_nohaplotig	exon	109824737	109824850	96	+	.	ID=FBgn0028997.1.mrna1.exon8;Name=FBgn0028997.1;Parent=FBgn0028997.1.mrna1;Target=FBgn0028997.1 937 1050 +
Chr2	stalkie_big_nohaplotig	exon	109825812	109825946	100	+	.	ID=FBgn0028997.1.mrna1.exon9;Name=FBgn0028997.1;Parent=FBgn0028997.1.mrna1;Target=FBgn0028997.1 1051 1185 +
Chr2	stalkie_big_nohaplotig	CDS	109821394	109821447	100	+	0	ID=FBgn0028997.1.mrna1.cds1;Name=FBgn0028997.1;Parent=FBgn0028997.1.mrna1;Target=FBgn0028997.1 1 54 +
Chr2	stalkie_big_nohaplotig	CDS	109822055	109822159	100	+	0	ID=FBgn0028997.1.mrna1.cds2;Name=FBgn0028997.1;Parent=FBgn0028997.1.mrna1;Target=FBgn0028997.1 55 159 +
Chr2	stalkie_big_nohaplotig	CDS	109822224	109822390	100	+	0	ID=FBgn0028997.1.mrna1.cds3;Name=FBgn0028997.1;Parent=FBgn0028997.1.mrna1;Target=FBgn0028997.1 160 326 +
Chr2	stalkie_big_nohaplotig	CDS	109822456	109822620	99	+	2	ID=FBgn0028997.1.mrna1.cds4;Name=FBgn0028997.1;Parent=FBgn0028997.1.mrna1;Target=FBgn0028997.1 327 491 +
Chr2	stalkie_big_nohaplotig	CDS	109822707	109822911	100	+	2	ID=FBgn0028997.1.mrna1.cds5;Name=FBgn0028997.1;Parent=FBgn0028997.1.mrna1;Target=FBgn0028997.1 492 696 +
Chr2	stalkie_big_nohaplotig	CDS	109823092	109823197	100	+	0	ID=FBgn0028997.1.mrna1.cds6;Name=FBgn0028997.1;Parent=FBgn0028997.1.mrna1;Target=FBgn0028997.1 697 802 +
Chr2	stalkie_big_nohaplotig	CDS	109824277	109824410	100	+	1	ID=FBgn0028997.1.mrna1.cds7;Name=FBgn0028997.1;Parent=FBgn0028997.1.mrna1;Target=FBgn0028997.1 803 936 +
Chr2	stalkie_big_nohaplotig	CDS	109824737	109824850	96	+	0	ID=FBgn0028997.1.mrna1.cds8;Name=FBgn0028997.1;Parent=FBgn0028997.1.mrna1;Target=FBgn0028997.1 937 1050 +
Chr2	stalkie_big_nohaplotig	CDS	109825812	109825946	100	+	0	ID=FBgn0028997.1.mrna1.cds9;Name=FBgn0028997.1;Parent=FBgn0028997.1.mrna1;Target=FBgn0028997.1 1051 1185 +
Chr2	stalkie_big_nohaplotig	mRNA	111740897	111741703	.	-	.	ID=FBgn0039271.1.mrna1;Name=FBgn0039271.1;Parent=FBgn0039271.1.path1;Dir=indeterminatecoverage=100.0;identity=99.8;matches=805;mismatches=2;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	111740897	111741703	99	-	.	ID=FBgn0039271.1.mrna1.exon1;Name=FBgn0039271.1;Parent=FBgn0039271.1.mrna1;Target=FBgn0039271.1 807 1 .
Chr2	stalkie_big_nohaplotig	CDS	111740897	111741703	99	-	0	ID=FBgn0039271.1.mrna1.cds1;Name=FBgn0039271.1;Parent=FBgn0039271.1.mrna1;Target=FBgn0039271.1 807 1 .
Chr2	stalkie_big_nohaplotig	mRNA	111517921	111525726	.	+	.	ID=FBgn0037659.1.mrna1;Name=FBgn0037659.1;Parent=FBgn0037659.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3620;mismatches=1;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	111517921	111517986	100	+	.	ID=FBgn0037659.1.mrna1.exon1;Name=FBgn0037659.1;Parent=FBgn0037659.1.mrna1;Target=FBgn0037659.1 1 66 +
Chr2	stalkie_big_nohaplotig	exon	111521909	111522069	100	+	.	ID=FBgn0037659.1.mrna1.exon2;Name=FBgn0037659.1;Parent=FBgn0037659.1.mrna1;Target=FBgn0037659.1 67 227 +
Chr2	stalkie_big_nohaplotig	exon	111522132	111522751	100	+	.	ID=FBgn0037659.1.mrna1.exon3;Name=FBgn0037659.1;Parent=FBgn0037659.1.mrna1;Target=FBgn0037659.1 228 847 +
Chr2	stalkie_big_nohaplotig	exon	111522830	111523534	99	+	.	ID=FBgn0037659.1.mrna1.exon4;Name=FBgn0037659.1;Parent=FBgn0037659.1.mrna1;Target=FBgn0037659.1 848 1552 +
Chr2	stalkie_big_nohaplotig	exon	111523595	111524262	100	+	.	ID=FBgn0037659.1.mrna1.exon5;Name=FBgn0037659.1;Parent=FBgn0037659.1.mrna1;Target=FBgn0037659.1 1553 2220 +
Chr2	stalkie_big_nohaplotig	exon	111524326	111525726	100	+	.	ID=FBgn0037659.1.mrna1.exon6;Name=FBgn0037659.1;Parent=FBgn0037659.1.mrna1;Target=FBgn0037659.1 2221 3621 +
Chr2	stalkie_big_nohaplotig	CDS	111517921	111517986	100	+	0	ID=FBgn0037659.1.mrna1.cds1;Name=FBgn0037659.1;Parent=FBgn0037659.1.mrna1;Target=FBgn0037659.1 1 66 +
Chr2	stalkie_big_nohaplotig	CDS	111521909	111522069	100	+	0	ID=FBgn0037659.1.mrna1.cds2;Name=FBgn0037659.1;Parent=FBgn0037659.1.mrna1;Target=FBgn0037659.1 67 227 +
Chr2	stalkie_big_nohaplotig	CDS	111522132	111522751	100	+	2	ID=FBgn0037659.1.mrna1.cds3;Name=FBgn0037659.1;Parent=FBgn0037659.1.mrna1;Target=FBgn0037659.1 228 847 +
Chr2	stalkie_big_nohaplotig	CDS	111522830	111523534	99	+	1	ID=FBgn0037659.1.mrna1.cds4;Name=FBgn0037659.1;Parent=FBgn0037659.1.mrna1;Target=FBgn0037659.1 848 1552 +
Chr2	stalkie_big_nohaplotig	CDS	111523595	111524262	100	+	1	ID=FBgn0037659.1.mrna1.cds5;Name=FBgn0037659.1;Parent=FBgn0037659.1.mrna1;Target=FBgn0037659.1 1553 2220 +
Chr2	stalkie_big_nohaplotig	CDS	111524326	111525726	100	+	0	ID=FBgn0037659.1.mrna1.cds6;Name=FBgn0037659.1;Parent=FBgn0037659.1.mrna1;Target=FBgn0037659.1 2221 3621 +
Chr2	stalkie_big_nohaplotig	mRNA	110123299	110145888	.	+	.	ID=FBgn0250823.1.mrna1;Name=FBgn0250823.1;Parent=FBgn0250823.1.path1;Dir=sensecoverage=100.0;identity=99.8;matches=1252;mismatches=1;indels=1;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	110123299	110123385	98	+	.	ID=FBgn0250823.1.mrna1.exon1;Name=FBgn0250823.1;Parent=FBgn0250823.1.mrna1;Target=FBgn0250823.1 1 88 +
Chr2	stalkie_big_nohaplotig	exon	110125102	110125212	99	+	.	ID=FBgn0250823.1.mrna1.exon2;Name=FBgn0250823.1;Parent=FBgn0250823.1.mrna1;Target=FBgn0250823.1 89 199 +
Chr2	stalkie_big_nohaplotig	exon	110126050	110126213	100	+	.	ID=FBgn0250823.1.mrna1.exon3;Name=FBgn0250823.1;Parent=FBgn0250823.1.mrna1;Target=FBgn0250823.1 200 363 +
Chr2	stalkie_big_nohaplotig	exon	110131182	110131296	100	+	.	ID=FBgn0250823.1.mrna1.exon4;Name=FBgn0250823.1;Parent=FBgn0250823.1.mrna1;Target=FBgn0250823.1 364 478 +
Chr2	stalkie_big_nohaplotig	exon	110131364	110131632	100	+	.	ID=FBgn0250823.1.mrna1.exon5;Name=FBgn0250823.1;Parent=FBgn0250823.1.mrna1;Target=FBgn0250823.1 479 747 +
Chr2	stalkie_big_nohaplotig	exon	110132505	110132675	100	+	.	ID=FBgn0250823.1.mrna1.exon6;Name=FBgn0250823.1;Parent=FBgn0250823.1.mrna1;Target=FBgn0250823.1 748 918 +
Chr2	stalkie_big_nohaplotig	exon	110135900	110135980	100	+	.	ID=FBgn0250823.1.mrna1.exon7;Name=FBgn0250823.1;Parent=FBgn0250823.1.mrna1;Target=FBgn0250823.1 919 999 +
Chr2	stalkie_big_nohaplotig	exon	110138645	110138743	100	+	.	ID=FBgn0250823.1.mrna1.exon8;Name=FBgn0250823.1;Parent=FBgn0250823.1.mrna1;Target=FBgn0250823.1 1000 1098 +
Chr2	stalkie_big_nohaplotig	exon	110144715	110144821	100	+	.	ID=FBgn0250823.1.mrna1.exon9;Name=FBgn0250823.1;Parent=FBgn0250823.1.mrna1;Target=FBgn0250823.1 1099 1205 +
Chr2	stalkie_big_nohaplotig	exon	110145840	110145888	100	+	.	ID=FBgn0250823.1.mrna1.exon10;Name=FBgn0250823.1;Parent=FBgn0250823.1.mrna1;Target=FBgn0250823.1 1206 1254 +
Chr2	stalkie_big_nohaplotig	CDS	110123301	110123365	98	+	0	ID=FBgn0250823.1.mrna1.cds1;Name=FBgn0250823.1;Parent=FBgn0250823.1.mrna1;Target=FBgn0250823.1 3 68 +
Chr2	stalkie_big_nohaplotig	mRNA	111154041	111154774	.	-	.	ID=FBgn0037345.1.mrna1;Name=FBgn0037345.1;Parent=FBgn0037345.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=618;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	111154747	111154774	100	-	.	ID=FBgn0037345.1.mrna1.exon1;Name=FBgn0037345.1;Parent=FBgn0037345.1.mrna1;Target=FBgn0037345.1 1 28 +
Chr2	stalkie_big_nohaplotig	exon	111154210	111154682	100	-	.	ID=FBgn0037345.1.mrna1.exon2;Name=FBgn0037345.1;Parent=FBgn0037345.1.mrna1;Target=FBgn0037345.1 29 501 +
Chr2	stalkie_big_nohaplotig	exon	111154041	111154157	100	-	.	ID=FBgn0037345.1.mrna1.exon3;Name=FBgn0037345.1;Parent=FBgn0037345.1.mrna1;Target=FBgn0037345.1 502 618 +
Chr2	stalkie_big_nohaplotig	CDS	111154747	111154774	100	-	0	ID=FBgn0037345.1.mrna1.cds1;Name=FBgn0037345.1;Parent=FBgn0037345.1.mrna1;Target=FBgn0037345.1 1 28 +
Chr2	stalkie_big_nohaplotig	CDS	111154210	111154682	100	-	1	ID=FBgn0037345.1.mrna1.cds2;Name=FBgn0037345.1;Parent=FBgn0037345.1.mrna1;Target=FBgn0037345.1 29 501 +
Chr2	stalkie_big_nohaplotig	CDS	111154041	111154157	100	-	0	ID=FBgn0037345.1.mrna1.cds3;Name=FBgn0037345.1;Parent=FBgn0037345.1.mrna1;Target=FBgn0037345.1 502 618 +
Chr2	stalkie_big_nohaplotig	mRNA	110278733	110279359	.	+	.	ID=FBgn0038307.1.mrna1;Name=FBgn0038307.1;Parent=FBgn0038307.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=513;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	110278733	110278747	100	+	.	ID=FBgn0038307.1.mrna1.exon1;Name=FBgn0038307.1;Parent=FBgn0038307.1.mrna1;Target=FBgn0038307.1 1 15 +
Chr2	stalkie_big_nohaplotig	exon	110278801	110279045	100	+	.	ID=FBgn0038307.1.mrna1.exon2;Name=FBgn0038307.1;Parent=FBgn0038307.1.mrna1;Target=FBgn0038307.1 16 260 +
Chr2	stalkie_big_nohaplotig	exon	110279107	110279359	100	+	.	ID=FBgn0038307.1.mrna1.exon3;Name=FBgn0038307.1;Parent=FBgn0038307.1.mrna1;Target=FBgn0038307.1 261 513 +
Chr2	stalkie_big_nohaplotig	CDS	110278733	110278747	100	+	0	ID=FBgn0038307.1.mrna1.cds1;Name=FBgn0038307.1;Parent=FBgn0038307.1.mrna1;Target=FBgn0038307.1 1 15 +
Chr2	stalkie_big_nohaplotig	CDS	110278801	110279045	100	+	0	ID=FBgn0038307.1.mrna1.cds2;Name=FBgn0038307.1;Parent=FBgn0038307.1.mrna1;Target=FBgn0038307.1 16 260 +
Chr2	stalkie_big_nohaplotig	CDS	110279107	110279359	100	+	2	ID=FBgn0038307.1.mrna1.cds3;Name=FBgn0038307.1;Parent=FBgn0038307.1.mrna1;Target=FBgn0038307.1 261 513 +
Chr2	stalkie_big_nohaplotig	mRNA	111484718	111489226	.	-	.	ID=FBgn0052133.mrna1;Name=FBgn0052133;Parent=FBgn0052133.path1;Dir=sensecoverage=100.0;identity=100.0;matches=3144;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	111488620	111489226	100	-	.	ID=FBgn0052133.mrna1.exon1;Name=FBgn0052133;Parent=FBgn0052133.mrna1;Target=FBgn0052133 1 607 +
Chr2	stalkie_big_nohaplotig	exon	111486622	111488334	100	-	.	ID=FBgn0052133.mrna1.exon2;Name=FBgn0052133;Parent=FBgn0052133.mrna1;Target=FBgn0052133 608 2320 +
Chr2	stalkie_big_nohaplotig	exon	111486119	111486344	100	-	.	ID=FBgn0052133.mrna1.exon3;Name=FBgn0052133;Parent=FBgn0052133.mrna1;Target=FBgn0052133 2321 2546 +
Chr2	stalkie_big_nohaplotig	exon	111484718	111485315	100	-	.	ID=FBgn0052133.mrna1.exon4;Name=FBgn0052133;Parent=FBgn0052133.mrna1;Target=FBgn0052133 2547 3144 +
Chr2	stalkie_big_nohaplotig	CDS	111488620	111489226	100	-	0	ID=FBgn0052133.mrna1.cds1;Name=FBgn0052133;Parent=FBgn0052133.mrna1;Target=FBgn0052133 1 607 +
Chr2	stalkie_big_nohaplotig	CDS	111486622	111488334	100	-	1	ID=FBgn0052133.mrna1.cds2;Name=FBgn0052133;Parent=FBgn0052133.mrna1;Target=FBgn0052133 608 2320 +
Chr2	stalkie_big_nohaplotig	CDS	111486119	111486344	100	-	1	ID=FBgn0052133.mrna1.cds3;Name=FBgn0052133;Parent=FBgn0052133.mrna1;Target=FBgn0052133 2321 2546 +
Chr2	stalkie_big_nohaplotig	CDS	111484718	111485315	100	-	2	ID=FBgn0052133.mrna1.cds4;Name=FBgn0052133;Parent=FBgn0052133.mrna1;Target=FBgn0052133 2547 3144 +
Chr2	stalkie_big_nohaplotig	mRNA	17642214	17653781	.	-	.	ID=FBgn0034282.1.mrna1;Name=FBgn0034282.1;Parent=FBgn0034282.1.path1;Dir=sensecoverage=100.0;identity=100.0;matches=936;mismatches=0;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	17653620	17653781	100	-	.	ID=FBgn0034282.1.mrna1.exon1;Name=FBgn0034282.1;Parent=FBgn0034282.1.mrna1;Target=FBgn0034282.1 1 162 +
Chr2	stalkie_big_nohaplotig	exon	17644185	17644348	100	-	.	ID=FBgn0034282.1.mrna1.exon2;Name=FBgn0034282.1;Parent=FBgn0034282.1.mrna1;Target=FBgn0034282.1 163 326 +
Chr2	stalkie_big_nohaplotig	exon	17643910	17644122	100	-	.	ID=FBgn0034282.1.mrna1.exon3;Name=FBgn0034282.1;Parent=FBgn0034282.1.mrna1;Target=FBgn0034282.1 327 539 +
Chr2	stalkie_big_nohaplotig	exon	17643692	17643768	100	-	.	ID=FBgn0034282.1.mrna1.exon4;Name=FBgn0034282.1;Parent=FBgn0034282.1.mrna1;Target=FBgn0034282.1 540 616 +
Chr2	stalkie_big_nohaplotig	exon	17642842	17642951	100	-	.	ID=FBgn0034282.1.mrna1.exon5;Name=FBgn0034282.1;Parent=FBgn0034282.1.mrna1;Target=FBgn0034282.1 617 726 +
Chr2	stalkie_big_nohaplotig	exon	17642318	17642486	100	-	.	ID=FBgn0034282.1.mrna1.exon6;Name=FBgn0034282.1;Parent=FBgn0034282.1.mrna1;Target=FBgn0034282.1 727 895 +
Chr2	stalkie_big_nohaplotig	exon	17642214	17642254	100	-	.	ID=FBgn0034282.1.mrna1.exon7;Name=FBgn0034282.1;Parent=FBgn0034282.1.mrna1;Target=FBgn0034282.1 896 936 +
Chr2	stalkie_big_nohaplotig	CDS	17653620	17653781	100	-	0	ID=FBgn0034282.1.mrna1.cds1;Name=FBgn0034282.1;Parent=FBgn0034282.1.mrna1;Target=FBgn0034282.1 1 162 +
Chr2	stalkie_big_nohaplotig	CDS	17644185	17644348	100	-	0	ID=FBgn0034282.1.mrna1.cds2;Name=FBgn0034282.1;Parent=FBgn0034282.1.mrna1;Target=FBgn0034282.1 163 326 +
Chr2	stalkie_big_nohaplotig	CDS	17643910	17644122	100	-	2	ID=FBgn0034282.1.mrna1.cds3;Name=FBgn0034282.1;Parent=FBgn0034282.1.mrna1;Target=FBgn0034282.1 327 539 +
Chr2	stalkie_big_nohaplotig	CDS	17643692	17643768	100	-	2	ID=FBgn0034282.1.mrna1.cds4;Name=FBgn0034282.1;Parent=FBgn0034282.1.mrna1;Target=FBgn0034282.1 540 616 +
Chr2	stalkie_big_nohaplotig	CDS	17642842	17642951	100	-	1	ID=FBgn0034282.1.mrna1.cds5;Name=FBgn0034282.1;Parent=FBgn0034282.1.mrna1;Target=FBgn0034282.1 617 726 +
Chr2	stalkie_big_nohaplotig	CDS	17642318	17642486	100	-	0	ID=FBgn0034282.1.mrna1.cds6;Name=FBgn0034282.1;Parent=FBgn0034282.1.mrna1;Target=FBgn0034282.1 727 895 +
Chr2	stalkie_big_nohaplotig	CDS	17642214	17642254	100	-	1	ID=FBgn0034282.1.mrna1.cds7;Name=FBgn0034282.1;Parent=FBgn0034282.1.mrna1;Target=FBgn0034282.1 896 936 +
Chr1	stalkie_big_nohaplotig	mRNA	118099421	118101172	.	-	.	ID=FBgn0033836.1.mrna1;Name=FBgn0033836.1;Parent=FBgn0033836.1.path1;Dir=sensecoverage=100.0;identity=99.4;matches=1562;mismatches=10;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	118100918	118101172	99	-	.	ID=FBgn0033836.1.mrna1.exon1;Name=FBgn0033836.1;Parent=FBgn0033836.1.mrna1;Target=FBgn0033836.1 1 255 +
Chr1	stalkie_big_nohaplotig	exon	118100347	118100863	99	-	.	ID=FBgn0033836.1.mrna1.exon2;Name=FBgn0033836.1;Parent=FBgn0033836.1.mrna1;Target=FBgn0033836.1 256 772 +
Chr1	stalkie_big_nohaplotig	exon	118099632	118100281	99	-	.	ID=FBgn0033836.1.mrna1.exon3;Name=FBgn0033836.1;Parent=FBgn0033836.1.mrna1;Target=FBgn0033836.1 773 1422 +
Chr1	stalkie_big_nohaplotig	exon	118099421	118099570	100	-	.	ID=FBgn0033836.1.mrna1.exon4;Name=FBgn0033836.1;Parent=FBgn0033836.1.mrna1;Target=FBgn0033836.1 1423 1572 +
Chr1	stalkie_big_nohaplotig	CDS	118100918	118101172	99	-	0	ID=FBgn0033836.1.mrna1.cds1;Name=FBgn0033836.1;Parent=FBgn0033836.1.mrna1;Target=FBgn0033836.1 1 255 +
Chr1	stalkie_big_nohaplotig	CDS	118100347	118100863	99	-	0	ID=FBgn0033836.1.mrna1.cds2;Name=FBgn0033836.1;Parent=FBgn0033836.1.mrna1;Target=FBgn0033836.1 256 772 +
Chr1	stalkie_big_nohaplotig	CDS	118099632	118100281	99	-	1	ID=FBgn0033836.1.mrna1.cds3;Name=FBgn0033836.1;Parent=FBgn0033836.1.mrna1;Target=FBgn0033836.1 773 1422 +
Chr1	stalkie_big_nohaplotig	CDS	118099421	118099570	100	-	0	ID=FBgn0033836.1.mrna1.cds4;Name=FBgn0033836.1;Parent=FBgn0033836.1.mrna1;Target=FBgn0033836.1 1423 1572 +
Chr1	stalkie_big_nohaplotig	mRNA	110067932	110069829	.	-	.	ID=ORF531.mrna1;Name=ORF531;Parent=ORF531.path1;Dir=indeterminatecoverage=100.0;identity=99.0;matches=1667;mismatches=16;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	110069791	110069829	100	-	.	ID=ORF531.mrna1.exon1;Name=ORF531;Parent=ORF531.mrna1;Target=ORF531 39 1 .
Chr1	stalkie_big_nohaplotig	exon	110068804	110069701	99	-	.	ID=ORF531.mrna1.exon2;Name=ORF531;Parent=ORF531.mrna1;Target=ORF531 937 40 .
Chr1	stalkie_big_nohaplotig	exon	110067932	110068677	98	-	.	ID=ORF531.mrna1.exon3;Name=ORF531;Parent=ORF531.mrna1;Target=ORF531 1683 938 .
Chr1	stalkie_big_nohaplotig	CDS	110069791	110069829	100	-	0	ID=ORF531.mrna1.cds1;Name=ORF531;Parent=ORF531.mrna1;Target=ORF531 39 1 .
Chr1	stalkie_big_nohaplotig	CDS	110068804	110069701	99	-	0	ID=ORF531.mrna1.cds2;Name=ORF531;Parent=ORF531.mrna1;Target=ORF531 937 40 .
Chr1	stalkie_big_nohaplotig	CDS	110067932	110068677	98	-	1	ID=ORF531.mrna1.cds3;Name=ORF531;Parent=ORF531.mrna1;Target=ORF531 1683 938 .
Chr1	stalkie_big_nohaplotig	mRNA	19843626	19843698	.	+	.	ID=FBgn0030050.1.mrna1;Name=FBgn0030050.1;Parent=FBgn0030050.1.path1;Dir=indeterminatecoverage=14.3;identity=83.6;matches=61;mismatches=12;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	19843626	19843698	83	+	.	ID=FBgn0030050.1.mrna1.exon1;Name=FBgn0030050.1;Parent=FBgn0030050.1.mrna1;Target=FBgn0030050.1 349 277 .
Chr1	stalkie_big_nohaplotig	CDS	19843626	19843697	83	+	0	ID=FBgn0030050.1.mrna1.cds1;Name=FBgn0030050.1;Parent=FBgn0030050.1.mrna1;Target=FBgn0030050.1 348 277 .
ChrX	stalkie_big_nohaplotig	mRNA	39313462	39314430	.	+	.	ID=ORF2192.mrna1;Name=ORF2192;Parent=ORF2192.path1;Dir=sensecoverage=100.0;identity=100.0;matches=900;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	39313462	39314100	100	+	.	ID=ORF2192.mrna1.exon1;Name=ORF2192;Parent=ORF2192.mrna1;Target=ORF2192 1 639 +
ChrX	stalkie_big_nohaplotig	exon	39314170	39314430	100	+	.	ID=ORF2192.mrna1.exon2;Name=ORF2192;Parent=ORF2192.mrna1;Target=ORF2192 640 900 +
ChrX	stalkie_big_nohaplotig	CDS	39313462	39314100	100	+	0	ID=ORF2192.mrna1.cds1;Name=ORF2192;Parent=ORF2192.mrna1;Target=ORF2192 1 639 +
ChrX	stalkie_big_nohaplotig	CDS	39314170	39314430	100	+	0	ID=ORF2192.mrna1.cds2;Name=ORF2192;Parent=ORF2192.mrna1;Target=ORF2192 640 900 +
ChrX	stalkie_big_nohaplotig	mRNA	90891287	90891658	.	+	.	ID=FBgn0032506.1.mrna1;Name=FBgn0032506.1;Parent=FBgn0032506.1.path1;Dir=indeterminatecoverage=14.5;identity=100.0;matches=372;mismatches=0;indels=0;unknowns=0
ChrX	stalkie_big_nohaplotig	exon	90891287	90891658	100	+	.	ID=FBgn0032506.1.mrna1.exon1;Name=FBgn0032506.1;Parent=FBgn0032506.1.mrna1;Target=FBgn0032506.1 2559 2188 .
ChrX	stalkie_big_nohaplotig	CDS	90891287	90891658	100	+	0	ID=FBgn0032506.1.mrna1.cds1;Name=FBgn0032506.1;Parent=FBgn0032506.1.mrna1;Target=FBgn0032506.1 2559 2188 .
Chr2	stalkie_big_nohaplotig	mRNA	48430518	48431626	.	+	.	ID=ORF1851.mrna1;Name=ORF1851;Parent=ORF1851.path1;Dir=sensecoverage=99.9;identity=99.2;matches=972;mismatches=8;indels=0;unknowns=0
Chr2	stalkie_big_nohaplotig	exon	48430518	48431335	99	+	.	ID=ORF1851.mrna1.exon1;Name=ORF1851;Parent=ORF1851.mrna1;Target=ORF1851 2 819 +
Chr2	stalkie_big_nohaplotig	exon	48431404	48431518	99	+	.	ID=ORF1851.mrna1.exon2;Name=ORF1851;Parent=ORF1851.mrna1;Target=ORF1851 820 934 +
Chr2	stalkie_big_nohaplotig	exon	48431580	48431626	100	+	.	ID=ORF1851.mrna1.exon3;Name=ORF1851;Parent=ORF1851.mrna1;Target=ORF1851 935 981 +
Chr2	stalkie_big_nohaplotig	CDS	48430520	48431335	99	+	0	ID=ORF1851.mrna1.cds1;Name=ORF1851;Parent=ORF1851.mrna1;Target=ORF1851 4 819 +
Chr2	stalkie_big_nohaplotig	CDS	48431404	48431518	99	+	0	ID=ORF1851.mrna1.cds2;Name=ORF1851;Parent=ORF1851.mrna1;Target=ORF1851 820 934 +
Chr2	stalkie_big_nohaplotig	CDS	48431580	48431626	100	+	1	ID=ORF1851.mrna1.cds3;Name=ORF1851;Parent=ORF1851.mrna1;Target=ORF1851 935 981 +
Chr1	stalkie_big_nohaplotig	mRNA	129659868	129660909	.	-	.	ID=FBgn0030242.1.mrna1;Name=FBgn0030242.1;Parent=FBgn0030242.1.path1;Dir=indeterminatecoverage=55.0;identity=78.9;matches=825;mismatches=214;indels=6;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	129659868	129660909	78	-	.	ID=FBgn0030242.1.mrna1.exon1;Name=FBgn0030242.1;Parent=FBgn0030242.1.mrna1;Target=FBgn0030242.1 1207 166 .
Chr1	stalkie_big_nohaplotig	CDS	129659869	129660909	78	-	0	ID=FBgn0030242.1.mrna1.cds1;Name=FBgn0030242.1;Parent=FBgn0030242.1.mrna1;Target=FBgn0030242.1 1206 166 .
Chr1	stalkie_big_nohaplotig	mRNA	18093800	18103464	.	+	.	ID=ORF3235.mrna1;Name=ORF3235;Parent=ORF3235.path1;Dir=sensecoverage=98.8;identity=99.9;matches=743;mismatches=1;indels=0;unknowns=0
Chr1	stalkie_big_nohaplotig	exon	18093800	18093817	100	+	.	ID=ORF3235.mrna1.exon1;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 1 18 +
Chr1	stalkie_big_nohaplotig	exon	18095645	18095683	100	+	.	ID=ORF3235.mrna1.exon2;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 19 57 +
Chr1	stalkie_big_nohaplotig	exon	18095749	18095790	100	+	.	ID=ORF3235.mrna1.exon3;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 58 99 +
Chr1	stalkie_big_nohaplotig	exon	18097099	18097122	100	+	.	ID=ORF3235.mrna1.exon4;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 100 123 +
Chr1	stalkie_big_nohaplotig	exon	18097264	18097308	100	+	.	ID=ORF3235.mrna1.exon5;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 124 168 +
Chr1	stalkie_big_nohaplotig	exon	18097375	18097416	100	+	.	ID=ORF3235.mrna1.exon6;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 169 210 +
Chr1	stalkie_big_nohaplotig	exon	18098097	18098135	100	+	.	ID=ORF3235.mrna1.exon7;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 211 249 +
Chr1	stalkie_big_nohaplotig	exon	18098620	18098661	100	+	.	ID=ORF3235.mrna1.exon8;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 250 291 +
Chr1	stalkie_big_nohaplotig	exon	18099126	18099158	100	+	.	ID=ORF3235.mrna1.exon9;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 292 324 +
Chr1	stalkie_big_nohaplotig	exon	18099760	18099798	100	+	.	ID=ORF3235.mrna1.exon10;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 325 363 +
Chr1	stalkie_big_nohaplotig	exon	18099886	18099918	100	+	.	ID=ORF3235.mrna1.exon11;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 364 396 +
Chr1	stalkie_big_nohaplotig	exon	18099996	18100022	100	+	.	ID=ORF3235.mrna1.exon12;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 397 423 +
Chr1	stalkie_big_nohaplotig	exon	18100076	18100108	100	+	.	ID=ORF3235.mrna1.exon13;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 424 456 +
Chr1	stalkie_big_nohaplotig	exon	18100216	18100248	100	+	.	ID=ORF3235.mrna1.exon14;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 457 489 +
Chr1	stalkie_big_nohaplotig	exon	18100348	18100368	100	+	.	ID=ORF3235.mrna1.exon15;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 490 510 +
Chr1	stalkie_big_nohaplotig	exon	18100434	18100466	100	+	.	ID=ORF3235.mrna1.exon16;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 511 543 +
Chr1	stalkie_big_nohaplotig	exon	18100547	18100579	100	+	.	ID=ORF3235.mrna1.exon17;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 544 576 +
Chr1	stalkie_big_nohaplotig	exon	18100638	18100670	100	+	.	ID=ORF3235.mrna1.exon18;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 577 609 +
Chr1	stalkie_big_nohaplotig	exon	18101487	18101522	97	+	.	ID=ORF3235.mrna1.exon19;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 610 645 +
Chr1	stalkie_big_nohaplotig	exon	18102050	18102076	100	+	.	ID=ORF3235.mrna1.exon20;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 646 672 +
Chr1	stalkie_big_nohaplotig	exon	18103318	18103356	100	+	.	ID=ORF3235.mrna1.exon21;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 673 711 +
Chr1	stalkie_big_nohaplotig	exon	18103432	18103464	100	+	.	ID=ORF3235.mrna1.exon22;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 712 744 +
Chr1	stalkie_big_nohaplotig	CDS	18093800	18093817	100	+	0	ID=ORF3235.mrna1.cds1;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 1 18 +
Chr1	stalkie_big_nohaplotig	CDS	18095645	18095683	100	+	0	ID=ORF3235.mrna1.cds2;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 19 57 +
Chr1	stalkie_big_nohaplotig	CDS	18095749	18095790	100	+	0	ID=ORF3235.mrna1.cds3;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 58 99 +
Chr1	stalkie_big_nohaplotig	CDS	18097099	18097122	100	+	0	ID=ORF3235.mrna1.cds4;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 100 123 +
Chr1	stalkie_big_nohaplotig	CDS	18097264	18097308	100	+	0	ID=ORF3235.mrna1.cds5;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 124 168 +
Chr1	stalkie_big_nohaplotig	CDS	18097375	18097416	100	+	0	ID=ORF3235.mrna1.cds6;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 169 210 +
Chr1	stalkie_big_nohaplotig	CDS	18098097	18098135	100	+	0	ID=ORF3235.mrna1.cds7;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 211 249 +
Chr1	stalkie_big_nohaplotig	CDS	18098620	18098661	100	+	0	ID=ORF3235.mrna1.cds8;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 250 291 +
Chr1	stalkie_big_nohaplotig	CDS	18099126	18099158	100	+	0	ID=ORF3235.mrna1.cds9;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 292 324 +
Chr1	stalkie_big_nohaplotig	CDS	18099760	18099798	100	+	0	ID=ORF3235.mrna1.cds10;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 325 363 +
Chr1	stalkie_big_nohaplotig	CDS	18099886	18099918	100	+	0	ID=ORF3235.mrna1.cds11;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 364 396 +
Chr1	stalkie_big_nohaplotig	CDS	18099996	18100022	100	+	0	ID=ORF3235.mrna1.cds12;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 397 423 +
Chr1	stalkie_big_nohaplotig	CDS	18100076	18100108	100	+	0	ID=ORF3235.mrna1.cds13;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 424 456 +
Chr1	stalkie_big_nohaplotig	CDS	18100216	18100248	100	+	0	ID=ORF3235.mrna1.cds14;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 457 489 +
Chr1	stalkie_big_nohaplotig	CDS	18100348	18100368	100	+	0	ID=ORF3235.mrna1.cds15;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 490 510 +
Chr1	stalkie_big_nohaplotig	CDS	18100434	18100466	100	+	0	ID=ORF3235.mrna1.cds16;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 511 543 +
Chr1	stalkie_big_nohaplotig	CDS	18100547	18100579	100	+	0	ID=ORF3235.mrna1.cds17;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 544 576 +
Chr1	stalkie_big_nohaplotig	CDS	18100638	18100670	100	+	0	ID=ORF3235.mrna1.cds18;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 577 609 +
Chr1	stalkie_big_nohaplotig	CDS	18101487	18101522	97	+	0	ID=ORF3235.mrna1.cds19;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 610 645 +
Chr1	stalkie_big_nohaplotig	CDS	18102050	18102076	100	+	0	ID=ORF3235.mrna1.cds20;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 646 672 +
Chr1	stalkie_big_nohaplotig	CDS	18103318	18103356	100	+	0	ID=ORF3235.mrna1.cds21;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 673 711 +
Chr1	stalkie_big_nohaplotig	CDS	18103432	18103464	100	+	0	ID=ORF3235.mrna1.cds22;Name=ORF3235;Parent=ORF3235.mrna1;Target=ORF3235 712 744 +